607 3228 205 44 69 chrX 3000012 3000907 -163649389 - L1_Mur3 LINE L1 -591 5289 4418 1 607 924 184 113 7 chrX 3000913 3001197 -163649099 - L1_Mur3 LINE L1 -2494 3386 3073 1 607 11043 197 106 77 chrX 3001215 3007926 -163642370 - L1_Mus1 LINE L1 0 6567 245 2 607 834 116 32 52 chrX 3008126 3008280 -163642016 - L1Md_F2 LINE L1 -4 6580 6430 3 607 4947 102 22 0 chrX 3008292 3009163 -163641133 - L1Md_F2 LINE L1 -262 6320 5420 3 607 472 65 0 0 chrX 3009148 3009210 -163641086 - L1Md_F2 LINE L1 -1065 4818 4757 3 607 2197 108 222 28 chrX 3009212 3009671 -163640625 - RLTR6_Mm LTR ERV1 -70 584 37 4 607 225 190 349 23 chrX 3009694 3009780 -163640516 - RLTR6_Mm LTR ERV1 -540 114 1 5 75 67014 24 13 1 chrX 3009780 3017467 -163632829 - RLTR6-int LTR ERV1 0 7778 1 5 608 2315 116 212 29 chrX 3017467 3017948 -163632348 - RLTR6_Mm LTR ERV1 -49 605 37 6 608 22457 101 42 16 chrX 3018057 3018500 -163631796 - L1VL1 LINE L1 -1125 4758 4352 7 608 3414 41 15 0 chrX 3018500 3018890 -163631406 + MTA_Mm LTR MaLR 1 396 0 8 608 22457 101 42 16 chrX 3018890 3019655 -163630641 - L1VL1 LINE L1 -1532 4351 3492 7 608 213 39 0 0 chrX 3019655 3019681 -163630615 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 9 608 22457 102 38 16 chrX 3019681 3022193 -163628103 - L1VL1 LINE L1 -2392 3491 951 7 608 2217 204 77 2 chrX 3022193 3022635 -163627661 - MERVL_2A-int LTR ERVL -2157 3604 3130 1 608 261 179 18 0 chrX 3022672 3022728 -163627568 + MERVL_2A-int LTR ERVL 2209 2265 -3496 1 608 5083 99 38 13 chrX 3023236 3024010 -163626286 + L1_Mur2 LINE L1 4827 5619 -258 1 608 5118 158 8 2 chrX 3024006 3024881 -163625415 - L1_Mur2 LINE L1 -1051 4826 3947 1 608 1111 148 171 22 chrX 3024992 3025220 -163625076 + Lx5 LINE L1 6788 7049 -1 1 608 216 0 0 0 chrX 3025673 3025697 -163624599 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 1 608 7622 58 9 19 chrX 3025712 3026215 -163624081 - L1_Mus1 LINE L1 -1 6566 6066 1 608 3678 33 0 0 chrX 3026215 3026611 -163623685 + MTA_Mm LTR MaLR 1 396 0 1 608 9882 29 4 1 chrX 3026611 3027706 -163622590 + MTA_Mm-int LTR MaLR 1 1098 0 1 608 3674 35 0 0 chrX 3027706 3028102 -163622194 + MTA_Mm LTR MaLR 1 396 0 1 608 7622 58 9 19 chrX 3028102 3028242 -163622054 - L1_Mus1 LINE L1 -502 6065 5933 1 608 4651 132 122 20 chrX 3028242 3029047 -163621249 - RMER17D LTR ERVK -2 887 1 1 608 7622 72 5 35 chrX 3029047 3029857 -163620439 - L1_Mus1 LINE L1 -635 5932 5154 1 608 1085 92 13 0 chrX 3029854 3030007 -163620289 + L1_Mus1 LINE L1 4992 5146 -737 1 608 954 181 0 0 chrX 3030575 3030719 -163619577 - B1_Mur4 SINE Alu -6 144 1 1 608 21 0 0 0 chrX 3030719 3030740 -163619556 + AT_rich Low_complexity Low_complexity 1 21 0 2 608 773 287 48 53 chrX 3030780 3031130 -163619166 + MTEa LTR MaLR 13 379 0 2 608 393 122 0 0 chrX 3031391 3031465 -163618831 + (CA)n Simple_repeat Simple_repeat 1 74 0 2 608 486 0 0 0 chrX 3031465 3031518 -163618778 + (GA)n Simple_repeat Simple_repeat 2 55 0 2 608 22 0 0 0 chrX 3033684 3033706 -163616590 + AT_rich Low_complexity Low_complexity 1 22 0 2 608 661 256 145 31 chrX 3033964 3034244 -163616052 - L1MD2 LINE L1 -368 5991 5672 2 608 7759 55 29 5 chrX 3034244 3035180 -163615116 - RLTR13A2 LTR ERVK 0 958 1 2 608 661 256 145 31 chrX 3035180 3035217 -163615079 - L1MD2 LINE L1 -688 5671 5638 2 608 5927 114 17 5 chrX 3035235 3036077 -163614219 - L1_Mus3 LINE L1 0 6638 5787 2 608 2526 105 2 2 chrX 3036090 3036468 -163613828 + L1_Mm LINE L1 4190 4582 -1558 2 608 796 104 0 0 chrX 3036806 3036921 -163613375 - ORR1A2 LTR MaLR 0 327 213 2 608 679 189 0 15 chrX 3036976 3037110 -163613186 - MT2B LTR ERVL -469 132 1 3 608 2985 265 42 150 chrX 3037114 3037308 -163612988 - L1_Mus3 LINE L1 -1807 4073 3890 3 608 946 180 0 0 chrX 3037308 3037458 -163612838 + B1_Mur4 SINE Alu 1 150 0 3 608 2985 265 42 150 chrX 3037458 3037739 -163612557 - L1_Mus3 LINE L1 -1991 3889 3621 3 608 6476 141 20 15 chrX 3037739 3038757 -163611539 + RLTR13D5 LTR ERVK 1 1023 0 3 608 2985 265 42 150 chrX 3038757 3039178 -163611118 - L1_Mus3 LINE L1 -2260 3620 3188 3 608 1045 143 21 52 chrX 3039178 3039370 -163610926 - B2_Mm2 SINE B2 -8 187 2 3 608 7429 178 26 76 chrX 3039370 3041403 -163608893 - L1_Mus3 LINE L1 0 6638 5604 3 608 1073 122 7 0 chrX 3041405 3041552 -163608744 + B1_Mus1 SINE Alu 1 148 0 3 608 5382 98 13 54 chrX 3041582 3042478 -163607818 - RLTR13A3 LTR ERVK 0 978 119 3 608 216 0 0 0 chrX 3042495 3042519 -163607777 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 608 555 161 131 0 chrX 3042587 3042717 -163607579 - Lx5 LINE L1 0 7050 6904 3 608 668 254 49 57 chrX 3042728 3043156 -163607140 - L1_Mur3 LINE L1 -4449 1431 1006 3 608 186 118 0 0 chrX 3043158 3043192 -163607104 + (T)n Simple_repeat Simple_repeat 1 34 0 4 608 3270 115 14 37 chrX 3043585 3044071 -163606225 - MT2C_Mm LTR ERVL 0 475 1 4 608 248 179 18 18 chrX 3044946 3044989 -163605307 - ORR1B2 LTR MaLR -250 117 75 4 608 2168 81 64 72 chrX 3044989 3045348 -163604948 + RLTR10B2 LTR ERVK 1 356 -9 4 608 611 161 27 0 chrX 3045352 3045464 -163604832 - ORR1C1 LTR MaLR -263 115 1 4 608 468 218 59 27 chrX 3045520 3045641 -163604655 - MTD LTR MaLR -14 405 282 4 608 874 192 198 0 chrX 3045712 3045899 -163604397 - URR1A DNA MER1_type 0 226 3 4 608 661 337 68 0 chrX 3046000 3046205 -163604091 + B4A SINE B4 1 219 -73 4 608 291 114 0 0 chrX 3046272 3046316 -163603980 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 608 247 235 52 0 chrX 3046385 3046500 -163603796 + ORR1A3-int LTR MaLR 634 754 -755 4 608 1012 99 0 0 chrX 3046398 3046539 -163603757 + B1_Mus1 SINE Alu 7 147 -1 5 608 26 0 0 0 chrX 3046965 3046991 -163603305 + AT_rich Low_complexity Low_complexity 1 26 0 5 608 397 255 140 62 chrX 3046993 3047394 -163602902 - MER106B DNA MER1_type -201 858 427 5 608 491 255 59 29 chrX 3047717 3047887 -163602409 - MER106B DNA MER1_type -801 258 84 5 608 1168 283 27 62 chrX 3048103 3048280 -163602016 + MTE2b LTR MaLR 5 180 -199 5 608 1580 209 92 17 chrX 3048280 3048626 -163601670 - ORR1D1 LTR MaLR 0 374 3 5 608 1168 283 27 62 chrX 3048626 3048821 -163601475 + MTE2b LTR MaLR 181 364 -15 5 608 1953 159 13 0 chrX 3048889 3049203 -163601093 + ORR1A3 LTR MaLR 1 318 -8 4 608 321 319 68 27 chrX 3049588 3049736 -163600560 + RMER15 LTR ERVL 422 575 0 5 608 2106 118 29 45 chrX 3049736 3050131 -163600165 + MT2B2 LTR ERVL 155 582 -2 5 608 10647 150 65 16 chrX 3050133 3052004 -163598292 + ORR1A3-int LTR MaLR 1 1963 0 5 608 1788 188 19 9 chrX 3052004 3052326 -163597970 + ORR1A3 LTR MaLR 1 325 -1 5 608 3644 139 69 16 chrX 3052326 3052812 -163597484 + Lx LINE L1 6017 6518 -136 5 608 204 40 0 0 chrX 3052812 3052837 -163597459 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 5 608 3644 139 69 16 chrX 3052837 3052956 -163597340 + Lx LINE L1 6519 6653 -1 5 608 21 0 0 0 chrX 3052978 3052999 -163597297 + AT_rich Low_complexity Low_complexity 1 21 0 6 608 620 234 35 0 chrX 3053048 3053189 -163597107 - B1_Mur1 SINE Alu -2 147 2 6 608 1693 138 124 36 chrX 3053980 3054310 -163595986 + ORR1B2 LTR MaLR 1 359 -8 6 608 30 0 0 0 chrX 3055014 3055044 -163595252 + AT_rich Low_complexity Low_complexity 1 30 0 6 608 306 353 69 69 chrX 3055077 3055663 -163594633 + L2a LINE L2 2796 3383 -43 6 608 2939 219 42 53 chrX 3055955 3056320 -163593976 - RMER6D LTR ERVK 0 720 363 6 608 306 0 0 0 chrX 3056320 3056354 -163593942 + (CCA)n Simple_repeat Simple_repeat 2 35 0 6 608 2713 219 42 53 chrX 3056354 3056412 -163593884 - RMER6D LTR ERVK -358 362 315 6 608 1863 139 92 3 chrX 3056412 3056750 -163593546 + RLTR9A LTR ERVK 1 368 0 6 608 2713 219 42 53 chrX 3056750 3057038 -163593258 - RMER6D LTR ERVK -406 314 16 6 608 4339 140 194 3 chrX 3057064 3058203 -163592093 + L1_Mur2 LINE L1 383 1740 -4137 6 608 9887 123 12 21 chrX 3058181 3058904 -163591392 + L1_Mur2 LINE L1 2141 2850 -3027 6 608 1882 207 45 2 chrX 3058904 3059331 -163590965 - BGLII_A LTR ERVK 0 445 1 6 608 9887 123 12 21 chrX 3059331 3060252 -163590044 + L1_Mur2 LINE L1 2851 3770 -2107 6 608 4643 221 53 5 chrX 3060689 3061214 -163589082 + L1VL4 LINE L1 859 1421 -4465 7 608 2173 106 3 0 chrX 3061214 3061526 -163588770 + L1_Mus1 LINE L1 6255 6567 0 7 608 4643 187 69 10 chrX 3061526 3062363 -163587933 + L1VL4 LINE L1 1422 2302 -3584 7 608 1823 273 65 51 chrX 3062368 3063000 -163587296 + RLTR26 LTR ERVK 2 642 0 7 608 1448 126 19 19 chrX 3063007 3063267 -163587029 + L1_Mur2 LINE L1 2308 2567 -3319 7 608 32852 80 1 4 chrX 3063269 3068576 -163581720 + L1Md_F2 LINE L1 199 5589 -297 7 608 7833 65 2 2 chrX 3068577 3069571 -163580725 + L1Md_F2 LINE L1 5591 6584 -1 7 608 195 42 0 0 chrX 3069992 3070016 -163580280 + (A)n Simple_repeat Simple_repeat 1 24 0 7 608 6507 228 121 66 chrX 3070017 3072151 -163578145 + L1_Mur2 LINE L1 2558 4832 -1045 7 608 1347 107 0 5 chrX 3072151 3072339 -163577957 + B2_Mm2 SINE B2 1 187 -8 7 608 6507 228 121 66 chrX 3072339 3072417 -163577879 + L1_Mur2 LINE L1 4833 4927 -950 7 608 297 0 0 0 chrX 3072417 3072450 -163577846 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 7 608 943 146 0 0 chrX 3072456 3072593 -163577703 - B1_Mus2 SINE Alu -6 141 5 7 608 6507 232 116 64 chrX 3072593 3073404 -163576892 + L1_Mur2 LINE L1 4928 5792 -388 7 608 2588 199 30 13 chrX 3073412 3073946 -163576350 + Lx4A LINE L1 6515 7057 -1 7 608 24 0 0 0 chrX 3073946 3073970 -163576326 + AT_rich Low_complexity Low_complexity 1 24 0 8 608 3863 217 42 13 chrX 3074591 3075467 -163574829 - RMER19B LTR ERVK 0 902 1 8 608 225 83 0 0 chrX 3078649 3078685 -163571611 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 8 608 633 112 16 23 chrX 3079556 3079684 -163570612 + (TA)n Simple_repeat Simple_repeat 2 128 0 8 608 6840 114 12 2 chrX 3080298 3081405 -163568891 - L1_Mus3 LINE L1 -1 6637 5515 8 608 18693 149 20 21 chrX 3081423 3083737 -163566559 - L1_Mus3 LINE L1 -1270 4613 2285 8 608 2597 85 0 3 chrX 3083737 3084080 -163566216 + ORR1A1 LTR MaLR 1 342 -4 8 608 18693 159 27 24 chrX 3084080 3086012 -163564284 - L1_Mus3 LINE L1 -3599 2284 361 8 608 809 260 57 9 chrX 3086617 3086827 -163563469 + RLTR41 LTR ERV1 227 446 0 8 608 1281 204 39 4 chrX 3086881 3087161 -163563135 - ORR1B1-int LTR MaLR -895 614 325 8 608 2929 107 75 2 chrX 3087161 3087657 -163562639 - RLTR47_MM LTR ERV1 0 532 1 8 608 335 304 51 17 chrX 3087742 3087919 -163562377 - RLTR6-int LTR ERV1 -51 7727 7545 8 608 189 0 0 0 chrX 3087942 3087963 -163562333 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 9 608 1512 142 38 22 chrX 3088266 3088609 -163561687 + LTRIS4 LTR ERV1 124 511 -1 9 608 266 209 32 113 chrX 3088610 3088734 -163561562 + MuRRS4-int LTR ERV1 1 114 -3584 9 608 2301 144 17 22 chrX 3088737 3089148 -163561148 + RLTR9E LTR ERVK 1 409 0 9 608 705 216 23 76 chrX 3089157 3089418 -163560878 + MMETn-int LTR ERVK 10 317 -2997 9 608 333 100 0 20 chrX 3089473 3089524 -163560772 + ETnERV2-int LTR ERVK 2091 2140 -5104 9 608 263 133 0 0 chrX 3089974 3090019 -163560277 + RMER16-int LTR ERVK 144 188 -5218 9 608 643 165 26 9 chrX 3090094 3090210 -163560086 + RMER16-int LTR ERVK 1089 1206 -4200 9 608 582 264 0 61 chrX 3090227 3090392 -163559904 + ETnERV2-int LTR ERVK 2454 2608 -4798 9 608 21365 114 21 15 chrX 3090394 3091227 -163559069 + ETnERV2-int LTR ERVK 3057 3932 -3474 9 608 822 73 0 0 chrX 3091227 3091337 -163558959 + (TA)n Simple_repeat Simple_repeat 2 111 0 9 608 21365 114 21 15 chrX 3091337 3093176 -163557120 + ETnERV2-int LTR ERVK 3933 5778 -1628 9 608 1141 112 77 11 chrX 3093176 3093335 -163556961 + B2_Mm1a SINE B2 1 160 -33 9 608 193 0 29 59 chrX 3093335 3093369 -163556927 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 9 608 1141 112 77 11 chrX 3093369 3093390 -163556906 + B2_Mm1a SINE B2 161 193 0 9 608 21365 156 18 39 chrX 3093390 3094115 -163556181 + ETnERV2-int LTR ERVK 5779 6220 -1186 9 608 526 93 0 13 chrX 3094326 3094402 -163555894 + ETnERV2-int LTR ERVK 7331 7405 -1 9 608 2513 138 7 17 chrX 3094402 3094815 -163555481 + RLTR9E LTR ERVK 1 409 0 9 608 14062 103 63 18 chrX 3094832 3098334 -163551962 + MuRRS4-int LTR ERV1 129 3789 -1274 9 608 595 256 182 42 chrX 3098398 3098777 -163551519 + L1M2 LINE L1 4384 4815 -1328 9 608 262 171 14 14 chrX 3098796 3098867 -163551429 + (CATATA)n Simple_repeat Simple_repeat 4 74 0 9 608 2937 283 82 52 chrX 3098870 3099211 -163551085 + Lx8 LINE L1 6172 6509 -964 1 608 504 32 0 0 chrX 3099211 3099273 -163551023 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 608 2937 283 82 52 chrX 3099273 3099825 -163550471 + Lx8 LINE L1 6510 7118 -355 1 608 1111 90 0 0 chrX 3099825 3099970 -163550326 + B1_Mus2 SINE Alu 1 145 -2 1 608 2937 283 82 52 chrX 3099970 3100006 -163550290 + Lx8 LINE L1 7119 7121 -352 1 608 681 13 0 0 chrX 3100006 3100084 -163550212 + (GAAA)n Simple_repeat Simple_repeat 2 79 0 1 608 2937 283 82 52 chrX 3100084 3100413 -163549883 + Lx8 LINE L1 7122 7470 -3 1 608 1192 266 56 25 chrX 3100532 3100891 -163549405 + ORR1B2 LTR MaLR 1 370 0 1 608 1264 261 35 35 chrX 3100891 3101128 -163549168 + ORR1B2-int LTR MaLR 1 232 -1138 1 608 633 199 406 7 chrX 3101128 3101253 -163549043 - RMER17C LTR ERVK 0 410 206 1 608 708 31 30 38 chrX 3101253 3101386 -163548910 + (GAGAA)n Simple_repeat Simple_repeat 5 136 0 1 608 633 199 406 7 chrX 3101386 3101553 -163548743 - RMER17C LTR ERVK -205 205 2 1 608 1264 265 43 34 chrX 3101553 3101770 -163548526 + ORR1B2-int LTR MaLR 230 471 -1038 1 608 2036 157 67 6 chrX 3101770 3102116 -163548180 + ORR1B2 LTR MaLR 1 367 0 1 608 972 233 52 91 chrX 3102116 3102238 -163548058 + ORR1B1-int LTR MaLR 472 621 -749 1 608 18930 100 3 2 chrX 3102240 3105064 -163545232 - L1Md_A LINE L1 -1937 3946 1122 1 608 12520 90 1 14 chrX 3105056 3106798 -163543498 + L1_Mus4 LINE L1 3940 5658 -225 1 608 2126 111 227 44 chrX 3106907 3107388 -163542908 + RLTR6_Mm LTR ERV1 37 605 -49 1 608 46184 19 12 1 chrX 3107388 3115075 -163535221 + RLTR6-int LTR ERV1 1 7778 0 1 608 2181 116 220 30 chrX 3115184 3115647 -163534649 + RLTR6_Mm LTR ERV1 37 587 -67 1 608 954 58 1 0 chrX 3115647 3115772 -163534524 + L1_Mus4 LINE L1 5658 5815 -368 1 608 228 281 0 0 chrX 3115759 3115816 -163534480 - Lx9 LINE L1 -387 7257 7201 1 608 4492 141 11 26 chrX 3115849 3116794 -163533502 - L1Md_A LINE L1 -4460 1423 498 1 608 696 107 48 16 chrX 3116795 3116919 -163533377 + L1Md_F2 LINE L1 6450 6577 -5 1 608 1000 288 54 37 chrX 3116922 3116963 -163533333 + Lx8 LINE L1 6138 6191 -1282 1 608 279 0 0 0 chrX 3116963 3116994 -163533302 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 608 1000 288 54 37 chrX 3116994 3117381 -163532915 + Lx8 LINE L1 6192 6573 -900 1 608 1574 168 98 98 chrX 3117390 3117836 -163532460 + RMER16 LTR ERVK 1 533 0 1 608 781 306 47 39 chrX 3117846 3117904 -163532392 + Lx8 LINE L1 6604 6666 -807 1 608 1861 178 31 116 chrX 3117904 3118386 -163531910 - RMER10A LTR ERVL 0 442 2 1 608 781 306 47 39 chrX 3118386 3118441 -163531855 + Lx8 LINE L1 6667 6720 -753 1 608 1837 171 127 95 chrX 3118441 3118873 -163531423 - RLTR41 LTR ERV1 0 446 1 1 608 781 306 47 39 chrX 3118873 3119118 -163531178 + Lx8 LINE L1 6721 6966 -507 1 608 265 274 0 0 chrX 3119132 3119196 -163531100 + B1F2 SINE Alu 1 64 -85 1 608 916 306 46 122 chrX 3119194 3119849 -163530447 - RLTR18 LTR ERVK -9 607 3 1 608 325 230 138 0 chrX 3119854 3119941 -163530355 + B1_Mur2 SINE Alu 49 147 -2 1 608 1090 88 44 0 chrX 3119974 3120110 -163530186 + B1_Mm SINE Alu 3 144 -3 1 608 828 92 0 0 chrX 3120110 3120229 -163530067 + (GAAA)n Simple_repeat Simple_repeat 2 120 0 1 608 1259 299 63 48 chrX 3120231 3120683 -163529613 + Lx7 LINE L1 5699 6159 -1537 1 608 3319 96 22 39 chrX 3120683 3121173 -163529123 + RLTR45 LTR ERVK 1 482 0 1 608 1259 299 63 48 chrX 3121173 3121231 -163529065 + Lx7 LINE L1 6160 6208 -1488 1 608 1296 136 0 37 chrX 3121231 3121445 -163528851 - Lx2 LINE L1 0 6997 6792 1 608 1259 299 63 48 chrX 3121445 3121538 -163528758 + Lx7 LINE L1 6209 6312 -1384 1 608 904 84 14 0 chrX 3122150 3122292 -163528004 + Lx LINE L1 6511 6654 0 1 608 885 116 14 7 chrX 3122380 3122527 -163527769 + Lx4A LINE L1 6910 7057 -1 1 608 198 0 0 0 chrX 3122527 3122549 -163527747 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 1 608 649 178 16 41 chrX 3122630 3122753 -163527543 + PB1D9 SINE Alu 1 120 0 1 608 718 164 78 0 chrX 3122949 3123077 -163527219 - B1_Mur2 SINE Alu 0 149 12 1 608 1274 146 28 28 chrX 3123118 3123329 -163526967 - Lx9 LINE L1 -624 7020 6810 1 608 448 174 22 55 chrX 3123328 3123419 -163526877 + Lx9 LINE L1 7130 7217 -427 1 608 2522 149 56 12 chrX 3123421 3123850 -163526446 - RLTR11B LTR ERVK -3 450 3 1 608 1169 193 98 0 chrX 3123851 3124156 -163526140 + Lx9 LINE L1 7309 7643 -1 1 608 316 329 38 31 chrX 3124204 3124364 -163525932 + Lx9 LINE L1 7266 7426 -218 1 608 429 219 31 20 chrX 3124742 3124840 -163525456 + RLTR23 LTR ERV1 332 430 0 1 608 277 300 8 106 chrX 3124869 3124992 -163525304 - RSINE1 SINE B4 0 165 55 1 608 1188 83 7 0 chrX 3125462 3125607 -163524689 + B1_Mus2 SINE Alu 2 147 0 1 608 229 221 159 14 chrX 3125626 3125695 -163524601 + PB1 SINE Alu 21 99 -28 1 608 2251 123 17 74 chrX 3125639 3126044 -163524252 + MT2B LTR ERVL 192 573 -28 1 608 2027 130 246 25 chrX 3126289 3126684 -163523612 - RLTR45 LTR ERVK 0 482 1 1 608 3976 221 43 15 chrX 3130003 3130862 -163519434 + RMER19B LTR ERVK 1 883 -19 1 608 25 0 0 0 chrX 3131486 3131511 -163518785 + AT_rich Low_complexity Low_complexity 1 25 0 1 608 2645 213 36 9 chrX 3131511 3132060 -163518236 - Lx4A LINE L1 -2 7056 6493 1 608 11130 177 234 11 chrX 3132053 3132919 -163517377 - Lx4A LINE L1 -1183 5875 4252 1 608 1307 128 0 5 chrX 3132919 3133108 -163517188 - B2_Mm2 SINE B2 -7 188 1 1 608 11130 173 244 11 chrX 3133108 3134902 -163515394 - Lx4A LINE L1 -1626 4251 2443 1 608 3046 94 5 2 chrX 3134902 3135297 -163514999 - MTA_Mm LTR MaLR 0 396 1 1 608 11130 173 244 11 chrX 3135297 3135447 -163514849 - Lx4A LINE L1 -3435 2442 2295 1 608 2108 273 65 52 chrX 3135450 3136084 -163514212 - RLTR26 LTR ERVK 0 642 1 1 608 4166 182 43 12 chrX 3136086 3136938 -163513358 - Lx4A LINE L1 -3582 2304 1426 1 608 2255 107 3 0 chrX 3136945 3137253 -163513043 - L1_Mus1 LINE L1 0 6567 6259 1 608 1662 229 44 10 chrX 3137253 3137724 -163512572 - L1VL4 LINE L1 -5347 988 521 1 608 8763 126 306 17 chrX 3138117 3138958 -163511338 - L1_Mur2 LINE L1 -2140 3737 2878 1 608 2161 182 49 7 chrX 3138958 3139385 -163510911 + BGLII_A LTR ERVK 1 445 0 1 608 8763 133 328 14 chrX 3139385 3140737 -163509559 - L1_Mur2 LINE L1 -3000 2877 878 1 608 3837 64 30 2 chrX 3140737 3141206 -163509090 + RLTR45 LTR ERVK 1 482 0 1 608 4307 75 119 18 chrX 3141206 3141834 -163508462 + RLTR45-int LTR ERVK 1 692 -6552 1 608 1093 72 0 0 chrX 3142132 3142270 -163508026 + RLTR45-int LTR ERVK 681 818 -6426 1 608 12116 41 47 3 chrX 3143066 3144872 -163505424 + RLTR45-int LTR ERVK 1329 3212 -4032 1 608 3874 100 30 28 chrX 3144842 3145448 -163504848 + RLTR45-int LTR ERVK 3380 3986 -3258 1 9 8410 45 1 8 chrX 3145443 3146456 -163503840 + RLTR45-int LTR ERVK 5067 6072 -1172 1 609 2030 94 13 3 chrX 3146478 3146777 -163503519 + RLTR13B1 LTR ERVK 207 508 -385 1 609 7740 49 1 3 chrX 3146777 3147691 -163502605 + RLTR45-int LTR ERVK 6333 7244 0 1 609 3742 73 30 2 chrX 3147691 3148160 -163502136 + RLTR45 LTR ERVK 1 482 0 1 609 2117 196 44 2 chrX 3148160 3148615 -163501681 - L1_Mur2 LINE L1 -6203 883 410 1 609 347 45 0 0 chrX 3148615 3148659 -163501637 - RLTR1 LTR ERV1 0 624 581 1 609 275 116 0 0 chrX 3148676 3148719 -163501577 - L1_Mur2 LINE L1 -6519 193 151 1 609 2974 214 44 36 chrX 3148745 3149032 -163501264 + RMER6D LTR ERVK 16 314 -406 1 609 2005 162 67 3 chrX 3149032 3149378 -163500918 - RLTR9A LTR ERVK 0 368 1 1 609 2974 214 44 36 chrX 3149378 3149435 -163500861 + RMER6D LTR ERVK 315 363 -357 1 609 300 91 0 0 chrX 3149435 3149479 -163500817 + (TGG)n Simple_repeat Simple_repeat 3 46 0 1 609 2974 214 44 36 chrX 3149479 3149832 -163500464 + RMER6D LTR ERVK 364 720 0 1 609 297 365 56 58 chrX 3150105 3150734 -163499562 - L2a LINE L2 -40 3386 2791 1 609 2116 150 3 58 chrX 3150951 3151297 -163498999 - ORR1A2 LTR MaLR 0 327 1 1 609 1666 134 11 0 chrX 3151297 3151572 -163498724 - ORR1A2-int LTR MaLR 0 1963 1686 1 609 2276 132 25 0 chrX 3151572 3151891 -163498405 + ORR1A2 LTR MaLR 1 327 0 1 609 4107 185 80 20 chrX 3151891 3152282 -163498014 + ORR1A2-int LTR MaLR 1 385 -1578 1 609 3001 78 7 68 chrX 3152282 3152475 -163497821 + MTB LTR MaLR 2 182 -218 1 609 1154 90 0 0 chrX 3152475 3152620 -163497676 + B1_Mm SINE Alu 3 147 0 1 609 3001 78 7 68 chrX 3152620 3152851 -163497445 + MTB LTR MaLR 183 400 0 1 609 4107 185 80 20 chrX 3152851 3153428 -163496868 + ORR1A2-int LTR MaLR 386 1027 -936 1 609 1787 105 269 0 chrX 3153823 3154146 -163496150 + ORR1A2-int LTR MaLR 1019 1428 -535 1 609 411 78 130 0 chrX 3154148 3154225 -163496071 - ORR1A2 LTR MaLR -240 87 1 1 609 834 182 13 20 chrX 3154501 3154652 -163495644 + B1_Mur4 SINE Alu 1 150 0 1 609 29 0 0 0 chrX 3154887 3154916 -163495380 + AT_rich Low_complexity Low_complexity 1 29 0 1 609 1200 178 4 96 chrX 3155898 3156147 -163494149 + URR1A DNA MER1_type 1 226 0 1 609 319 317 48 37 chrX 3156220 3156407 -163493889 + HERVL40-int LTR ERVL 3301 3489 -2041 1 609 1586 180 182 6 chrX 3156412 3156747 -163493549 - RMER10B LTR ERVL 0 398 5 1 609 1527 159 75 117 chrX 3156762 3157190 -163493106 + RMER17C LTR ERVK 1 410 0 1 609 342 231 50 33 chrX 3157256 3157377 -163492919 - RMER17C-int LTR ERVK -144 3094 2972 1 609 312 93 164 18 chrX 3157589 3157644 -163492652 - RMER10B LTR ERVL -335 63 1 1 609 210 37 0 0 chrX 3157850 3157877 -163492419 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1 609 595 285 53 5 chrX 3157921 3158108 -163492188 - ORR1D2 LTR MaLR -17 353 158 1 609 595 177 121 25 chrX 3158121 3158342 -163491954 - ORR1D2-int LTR MaLR -17 1563 1216 1 609 958 251 23 115 chrX 3158364 3158501 -163491795 - Lx7 LINE L1 -21 7675 7558 1 609 1218 56 7 0 chrX 3158501 3158643 -163491653 + B1_Mm SINE Alu 5 147 0 1 609 958 251 23 115 chrX 3158643 3158991 -163491305 - Lx7 LINE L1 -139 7557 7235 1 609 496 148 198 0 chrX 3159033 3159134 -163491162 + ORR1B2 LTR MaLR 1 121 -246 1 609 464 276 65 58 chrX 3159302 3159579 -163490717 - L1M4 LINE L1 -395 5789 5511 1 609 283 314 11 44 chrX 3159604 3159694 -163490602 + MLT1-int LTR MaLR 939 1025 -346 1 609 505 283 0 8 chrX 3159719 3159840 -163490456 + B1F SINE Alu 29 148 -1 1 609 620 181 138 36 chrX 3160121 3160316 -163489980 - Lx9 LINE L1 -7 7637 7423 1 609 250 333 36 0 chrX 3160393 3160477 -163489819 - RLTR19-int LTR ERVK -1662 4475 4389 1 609 432 0 0 0 chrX 3160716 3160764 -163489532 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 1 609 32906 85 4 46 chrX 3160820 3167325 -163482971 - L1Md_F2 LINE L1 0 6585 278 1 609 226 271 0 48 chrX 3168176 3168238 -163482058 - ID4 SINE ID -23 60 2 1 609 7137 54 10 0 chrX 3168613 3169497 -163480799 + RLTR13B1 LTR ERVK 1 893 0 1 609 523 353 33 28 chrX 3169594 3169807 -163480489 - MER76 LTR ERVL -477 214 1 1 609 1848 162 16 86 chrX 3170152 3170524 -163479772 + ORR1B1 LTR MaLR 41 386 -8 1 609 752 293 78 78 chrX 3170579 3170875 -163479421 + MT2A LTR ERVL 173 468 -65 1 609 414 165 47 6 chrX 3170879 3171050 -163479246 + (TA)n Simple_repeat Simple_repeat 1 178 0 1 609 938 173 168 0 chrX 3171072 3171263 -163479033 + URR1B DNA MER1_type 1 223 -2 1 609 31941 92 8 5 chrX 3171263 3177589 -163472707 + L1Md_F2 LINE L1 273 6570 -12 1 609 21 0 0 0 chrX 3177678 3177699 -163472597 + AT_rich Low_complexity Low_complexity 1 21 0 1 609 1290 101 17 0 chrX 3177699 3177877 -163472419 - B2_Mm2 SINE B2 -14 181 1 1 609 721 257 9 8 chrX 3178031 3178204 -163472092 - RMER16 LTR ERVK -274 259 1 1 609 422 147 0 0 chrX 3178204 3178279 -163472017 - RMER16-int LTR ERVK -2 5404 5330 1 609 6325 124 35 30 chrX 3178386 3179480 -163470816 - RMER16-int LTR ERVK -103 5303 4205 1 609 19586 106 40 47 chrX 3180060 3183048 -163467248 - RMER16-int LTR ERVK -1539 3867 931 1 609 4755 58 3 0 chrX 3183048 3183633 -163466663 + LTRIS_Mus LTR ERV1 1 587 0 1 609 19586 106 40 47 chrX 3183633 3183855 -163466441 - RMER16-int LTR ERVK -4476 930 706 1 609 627 14 0 0 chrX 3183855 3183927 -163466369 + (TC)n Simple_repeat Simple_repeat 2 73 0 1 609 19586 106 40 47 chrX 3183927 3184194 -163466102 - RMER16-int LTR ERVK -4701 705 415 1 609 573 151 0 0 chrX 3184194 3184287 -163466009 + RMER19B LTR ERVK 798 890 -12 1 609 1516 254 64 13 chrX 3184297 3184748 -163465548 + Lx8 LINE L1 6566 7039 -434 1 609 307 175 18 0 chrX 3184748 3184805 -163465491 + LTRIS_Mus LTR ERV1 264 321 -266 2 609 314 175 16 16 chrX 3184816 3184880 -163465416 + Lx8 LINE L1 7095 7158 -315 1 609 569 14 14 0 chrX 3185013 3185083 -163465213 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 609 369 0 0 0 chrX 3185084 3185125 -163465171 + (GA)n Simple_repeat Simple_repeat 1 41 0 2 609 354 251 140 25 chrX 3185250 3185450 -163464846 + L1M2 LINE L1 3039 3261 -2882 2 609 923 293 67 56 chrX 3186263 3186654 -163463642 - LTR55 LTR ERV -149 399 5 2 609 670 300 17 62 chrX 3187565 3187853 -163462443 + LTR55 LTR ERV 4 278 -270 2 609 239 258 32 0 chrX 3187942 3188004 -163462292 + ID_B1 SINE B4 161 224 0 2 609 706 147 178 35 chrX 3188064 3188233 -163462063 - B2_Mm2 SINE B2 -2 193 1 2 609 6568 103 9 12 chrX 3188431 3189987 -163460309 + L1_Mus2 LINE L1 5016 6565 -1 2 609 1020 66 73 0 chrX 3190190 3190327 -163459969 - B1_Mm SINE Alu 0 147 1 2 609 1250 199 36 68 chrX 3190547 3190828 -163459468 + ORR1C1 LTR MaLR 3 274 -104 2 609 2642 56 0 6 chrX 3190817 3191156 -163459140 - IAPLTR4 LTR ERVK -8 337 1 2 609 5680 194 3 7 chrX 3191156 3192212 -163458084 - IAPLTR3-int LTR ERVK -20 6801 5750 2 609 607 257 35 46 chrX 3192563 3192824 -163457472 - IAPLTR3-int LTR ERVK -819 5723 5466 2 609 317 283 0 0 chrX 3193077 3193169 -163457127 - IAPLTR3-int LTR ERVK -974 5507 5416 2 609 872 213 9 6 chrX 3193168 3193388 -163456908 - IAPLTR3-int LTR ERVK -2279 5302 4925 2 609 737 117 28 28 chrX 3193499 3193640 -163456656 - IAPLTR3-int LTR ERVK -2911 4670 4530 2 609 515 187 12 0 chrX 3193657 3193776 -163456520 - MMETn-int LTR ERVK -2380 2464 2357 2 609 5964 127 52 3 chrX 3193778 3195140 -163455156 - ETnERV3-int LTR ERVK -3135 4271 2735 2 609 272 221 0 68 chrX 3195153 3195226 -163455070 - ETnERV3-int LTR ERVK -4868 2538 2471 2 609 432 175 92 0 chrX 3195255 3195375 -163454921 - ETnERV3-int LTR ERVK -5557 1849 1719 2 609 1175 204 108 49 chrX 3195418 3195856 -163454440 - RMER16-int LTR ERVK -4783 623 255 2 609 330 144 0 111 chrX 3195977 3196094 -163454202 - IAPLTR3-int LTR ERVK -6629 952 849 2 609 391 93 22 126 chrX 3196084 3196219 -163454077 - IAPLTR3-int LTR ERVK -5867 954 834 2 609 436 188 9 38 chrX 3196219 3196324 -163453972 - IAPLTR3-int LTR ERVK -6704 117 16 2 609 2618 65 0 6 chrX 3196331 3196670 -163453626 - IAPLTR4 LTR ERVK -8 337 1 2 609 660 211 0 0 chrX 3196672 3196795 -163453501 + ORR1C1 LTR MaLR 256 378 0 2 609 2016 173 8 3 chrX 3196995 3197372 -163452924 + RLTR14 LTR ERV1 2 380 -2 2 609 1182 219 24 54 chrX 3197374 3197707 -163452589 + RLTR14-int LTR ERV1 1 323 -4994 2 609 325 213 0 0 chrX 3197942 3198003 -163452293 - ORR1A4 LTR MaLR -8 321 261 2 609 1030 215 4 83 chrX 3197999 3198253 -163452043 - ORR1A4-int LTR MaLR -192 1771 1538 2 609 6908 84 2 4 chrX 3198253 3199497 -163450799 - L1Md_F2 LINE L1 -5 6577 5337 2 609 10671 98 12 4 chrX 3199493 3201815 -163448481 - L1Md_F LINE L1 -3006 2877 536 2 609 4726 161 20 6 chrX 3201815 3202650 -163447646 - ORR1A4-int LTR MaLR -405 1558 712 2 609 4205 158 27 60 chrX 3202648 3203502 -163446794 - ORR1A4-int LTR MaLR -1137 826 1 2 609 279 214 0 0 chrX 3203502 3203558 -163446738 - ORR1A4 LTR MaLR 0 329 274 2 609 1990 84 11 11 chrX 3205364 3205651 -163444645 - ORR1A4 LTR MaLR -42 287 1 2 609 1182 196 185 22 chrX 3205651 3205950 -163444346 - RLTR33 LTR ERVK -152 526 177 2 609 641 181 0 2 chrX 3206092 3206218 -163444078 + ORR1B2 LTR MaLR 1 113 -233 2 609 3616 137 142 113 chrX 3206371 3206770 -163443526 - RMER17A2 LTR ERVK 0 906 447 2 609 939 57 0 0 chrX 3206770 3206892 -163443404 + (GA)n Simple_repeat Simple_repeat 1 122 0 2 609 3616 137 142 113 chrX 3206892 3207373 -163442923 - RMER17A2 LTR ERVK -460 446 2 2 609 387 41 0 0 chrX 3211800 3211849 -163438447 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 609 1938 137 0 0 chrX 3215093 3215386 -163434910 + L1_Mus4 LINE L1 6330 6622 -14 2 609 5795 97 6 1 chrX 3224077 3224879 -163425417 - L1_Mm LINE L1 -264 5619 4814 2 609 2569 88 17 0 chrX 3224876 3225229 -163425067 + L1_Mus3 LINE L1 5228 5586 -297 2 609 7777 84 4 3 chrX 3225229 3226212 -163424084 + L1Md_F2 LINE L1 5587 6570 -12 2 609 22720 158 8 47 chrX 3226212 3230735 -163419561 + L1_Mus3 LINE L1 1637 5967 -671 2 609 558 75 0 0 chrX 3231290 3231370 -163418926 + (GGAA)n Simple_repeat Simple_repeat 3 82 0 2 609 291 169 115 115 chrX 3231863 3231950 -163418346 + MTEa LTR MaLR 47 133 -226 2 609 379 263 0 0 chrX 3232024 3232100 -163418196 - RSINE1 SINE B4 -85 80 5 2 609 375 328 55 45 chrX 3232142 3232336 -163417960 + MTEa LTR MaLR 160 379 0 2 609 4212 145 5 19 chrX 3232876 3233542 -163416754 - L1_Mus3 LINE L1 -7 6631 5976 2 609 195 69 0 0 chrX 3233556 3233585 -163416711 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 609 411 38 0 0 chrX 3233587 3233640 -163416656 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 609 231 197 14 27 chrX 3233640 3233713 -163416583 + (TCTCTG)n Simple_repeat Simple_repeat 4 75 0 2 609 467 194 0 183 chrX 3233720 3233884 -163416412 - B1_Mus2 SINE Alu -13 134 1 2 609 1625 229 40 0 chrX 3233884 3234211 -163416085 - ORR1B1 LTR MaLR -41 353 14 2 609 588 314 25 21 chrX 3234272 3234555 -163415741 - RLTR15 LTR ERVK -73 286 3 2 609 944 125 0 7 chrX 3235032 3235177 -163415119 + L1_Mus3 LINE L1 2241 2384 -3499 2 609 14680 131 9 11 chrX 3235171 3238267 -163412029 + L1_Mus3 LINE L1 3531 6620 -18 2 609 29 0 0 0 chrX 3238300 3238329 -163411967 + AT_rich Low_complexity Low_complexity 1 29 0 2 609 803 180 29 23 chrX 3240596 3240767 -163409529 + L1_Mur3 LINE L1 4589 4760 -1120 2 609 476 284 60 7 chrX 3240768 3240917 -163409379 + MTE2a-int LTR MaLR 1424 1580 0 2 609 855 291 77 35 chrX 3240919 3241257 -163409039 + MTE2a LTR MaLR 28 379 0 2 609 377 277 0 61 chrX 3243730 3243895 -163406401 + CT-rich Low_complexity Low_complexity 4 158 0 2 609 369 0 0 0 chrX 3244247 3244288 -163406008 + (TA)n Simple_repeat Simple_repeat 1 41 0 2 609 719 274 11 50 chrX 3244491 3244850 -163405446 - RMER19A LTR ERVK -478 259 1 2 609 1525 300 81 21 chrX 3245198 3245767 -163404529 + Lx8 LINE L1 6071 6673 -800 2 609 727 344 70 19 chrX 3245782 3246265 -163404031 + Lx8 LINE L1 6730 7237 -236 2 609 5669 192 40 48 chrX 3247445 3248775 -163401521 - L1_Mur3 LINE L1 -144 5736 4418 2 609 961 181 113 7 chrX 3248781 3249065 -163401231 - L1_Mur3 LINE L1 -2494 3386 3073 2 609 7020 115 12 2 chrX 3249083 3250540 -163399756 - L1_Mus2 LINE L1 -1 6565 5092 2 609 23415 128 16 7 chrX 3250554 3255117 -163395179 - L1_Mus1 LINE L1 0 6567 1963 2 609 340 0 0 0 chrX 3255118 3255162 -163395134 - L1Md_T LINE L1 -2 6580 6537 2 609 27851 75 43 1 chrX 3255162 3260197 -163390099 - L1Md_T LINE L1 -3 6582 867 2 609 3114 19 13 69 chrX 3260197 3260586 -163389710 - IAPLTR1_Mm LTR ERVK 0 367 1 2 609 56654 22 16 2 chrX 3260586 3266973 -163383323 - IAPEz-int LTR ERVK 0 6481 8 2 609 3114 19 13 69 chrX 3266973 3267362 -163382934 - IAPLTR1_Mm LTR ERVK 0 367 1 2 609 519 222 214 28 chrX 3267362 3267654 -163382642 - L1Md_T LINE L1 -5747 872 527 2 609 605 280 66 123 chrX 3267660 3268135 -163382161 - L1VL1 LINE L1 -6025 397 29 2 609 721 151 33 46 chrX 3268337 3268490 -163381806 - L1Md_F2 LINE L1 -4 6580 6430 2 609 5192 99 18 0 chrX 3268502 3269618 -163380678 - L1Md_F2 LINE L1 -262 6320 5174 2 609 4658 18 2 0 chrX 3269619 3270111 -163380185 - MT2_Mm LTR ERVL 0 493 1 2 609 322 0 0 0 chrX 3270111 3270149 -163380147 - MERVL-int LTR ERVL 0 5485 5448 2 609 387 167 46 35 chrX 3270149 3270236 -163380060 - ORR1A3-int LTR MaLR -1323 640 553 2 609 48367 14 6 0 chrX 3270236 3275563 -163374733 - MERVL-int LTR ERVL -125 5360 1 2 609 4684 16 2 0 chrX 3275563 3276055 -163374241 - MT2_Mm LTR ERVL 0 493 1 2 76 14119 105 49 17 chrX 3276055 3276897 -163373399 - L1Md_F2 LINE L1 -706 5177 4352 2 610 3528 28 15 0 chrX 3276897 3277287 -163373009 + MTA_Mm LTR MaLR 1 396 0 2 610 20938 100 44 8 chrX 3277287 3278055 -163372241 - L1Md_F2 LINE L1 -1532 4351 3489 2 610 297 51 0 0 chrX 3278055 3278094 -163372202 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 2 610 20938 100 40 8 chrX 3278094 3280607 -163369689 - L1Md_F2 LINE L1 -2395 3488 951 2 610 2201 204 77 2 chrX 3280607 3281049 -163369247 - MERVL_2A-int LTR ERVL -2157 3604 3130 2 610 286 161 18 0 chrX 3281085 3281141 -163369155 + MERVL_2A-int LTR ERVL 2209 2265 -3496 2 610 4986 99 39 12 chrX 3281648 3282424 -163367872 + L1_Mur2 LINE L1 4827 5623 -254 2 610 4885 159 10 5 chrX 3282418 3283292 -163367004 - L1_Mur2 LINE L1 -1052 4825 3947 2 610 670 191 164 32 chrX 3283403 3283620 -163366676 + Lx4B LINE L1 6788 7054 -4 2 610 189 0 0 0 chrX 3284076 3284097 -163366199 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2 610 4713 75 11 5 chrX 3284126 3284765 -163365531 - L1_Mus1 LINE L1 0 6567 5925 2 610 4139 135 8 56 chrX 3284765 3285567 -163364729 - RMER17A LTR ERVK -2 749 1 2 610 5084 72 5 26 chrX 3285567 3286374 -163363922 - L1_Mus1 LINE L1 -635 5932 5154 2 610 1057 110 0 0 chrX 3286371 3286526 -163363770 + L1_Mus1 LINE L1 4992 5146 -737 2 610 950 156 0 0 chrX 3287115 3287256 -163363040 - B1_Mur4 SINE Alu -9 141 1 2 610 21 0 0 0 chrX 3287256 3287277 -163363019 + AT_rich Low_complexity Low_complexity 1 21 0 2 610 785 279 66 52 chrX 3287317 3287662 -163362634 + MTEa LTR MaLR 13 379 0 2 610 354 100 0 0 chrX 3287922 3287982 -163362314 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 610 267 31 0 0 chrX 3287982 3288013 -163362283 + (GA)n Simple_repeat Simple_repeat 2 33 0 2 610 1538 178 10 0 chrX 3288720 3289018 -163361278 + L1Md_F LINE L1 166 466 -6053 2 610 34966 36 1 1 chrX 3289010 3293301 -163356995 + L1Md_T LINE L1 1296 5586 -297 2 610 8058 39 15 2 chrX 3293301 3294282 -163356014 + L1Md_T LINE L1 5587 6580 -2 2 610 878 219 0 0 chrX 3294955 3295115 -163355181 - ORR1A3 LTR MaLR -166 160 1 2 610 541 296 26 68 chrX 3295183 3295375 -163354921 - MTE2b LTR MaLR -15 364 181 2 610 1506 234 87 12 chrX 3295378 3295724 -163354572 + ORR1D1 LTR MaLR 3 374 0 2 610 704 271 28 11 chrX 3295724 3295901 -163354395 - MTE2b LTR MaLR -195 184 5 2 610 487 315 66 59 chrX 3296031 3296287 -163354009 + MER106B DNA MER1_type 1 258 -801 2 610 464 259 144 63 chrX 3296635 3297018 -163353278 + MER106B DNA MER1_type 445 858 -201 2 610 1011 116 0 0 chrX 3297471 3297618 -163352678 - B1_Mus1 SINE Alu -1 147 1 2 610 366 80 0 0 chrX 3297694 3297744 -163352552 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 610 708 327 68 0 chrX 3297811 3298016 -163352280 - B4A SINE B4 -73 219 1 2 610 372 288 84 18 chrX 3298109 3298275 -163352021 - CYRA11_Mm Unknown Y-chromosome -225 392 216 2 610 812 184 114 6 chrX 3298129 3298304 -163351992 + URR1A DNA MER1_type 33 226 0 2 610 470 218 59 27 chrX 3298374 3298495 -163351801 + MTD LTR MaLR 282 405 -14 2 610 586 179 27 0 chrX 3298551 3298663 -163351633 + ORR1C2 LTR MaLR 1 115 -263 2 610 2057 90 64 72 chrX 3298667 3299026 -163351270 - RLTR10B2 LTR ERVK -9 356 1 2 610 1524 135 75 0 chrX 3299027 3299293 -163351003 + ORR1C2 LTR MaLR 95 380 -4 2 610 3040 119 12 37 chrX 3300214 3300701 -163349595 + MT2C_Mm LTR ERVL 1 475 0 2 610 231 114 0 0 chrX 3301094 3301138 -163349158 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 2 610 668 247 63 55 chrX 3301138 3301555 -163348741 + L1_Mus3 LINE L1 1008 1429 -4451 2 610 581 154 131 0 chrX 3301568 3301698 -163348598 + Lx5 LINE L1 6904 7050 0 2 610 252 0 0 0 chrX 3301766 3301794 -163348502 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 610 4975 111 34 55 chrX 3301811 3302689 -163347607 + RLTR13A3 LTR ERVK 119 978 0 2 610 976 136 7 0 chrX 3302720 3302867 -163347429 - B1_Mus1 SINE Alu 0 148 1 2 610 7088 184 25 73 chrX 3302869 3304894 -163345402 + L1_Mus3 LINE L1 5604 6638 0 2 610 975 152 10 42 chrX 3304894 3305086 -163345210 + B2_Mm2 SINE B2 2 187 -8 2 610 2594 268 40 146 chrX 3305086 3305507 -163344789 + L1_Mus3 LINE L1 3188 3620 -2260 2 610 6328 124 20 15 chrX 3305507 3306525 -163343771 - RLTR13D5 LTR ERVK 0 1023 1 2 610 2594 268 40 146 chrX 3306525 3306805 -163343491 + L1_Mus3 LINE L1 3621 3889 -1991 2 610 872 187 0 0 chrX 3306805 3306955 -163343341 - B1_Mur4 SINE Alu 0 150 1 2 610 2594 268 40 146 chrX 3306955 3307149 -163343147 + L1_Mus3 LINE L1 3890 4073 -1807 2 610 689 189 0 15 chrX 3307153 3307287 -163343009 + MT2B LTR ERVL 1 132 -469 2 610 752 130 0 0 chrX 3307342 3307457 -163342839 + ORR1A2 LTR MaLR 213 327 0 2 610 2491 104 1 1 chrX 3307788 3308166 -163342130 - L1_Mm LINE L1 -1558 4582 4190 3 610 5359 120 20 5 chrX 3308177 3309016 -163341280 + L1_Mus3 LINE L1 5787 6638 0 3 610 608 257 152 10 chrX 3309038 3309348 -163340948 + L1MD2 LINE L1 5638 5991 -368 3 610 23 33 0 0 chrX 3309605 3309635 -163340661 + AT_rich Low_complexity Low_complexity 1 30 0 3 610 37439 35 3 1 chrX 3311114 3316386 -163333910 - L1Md_T LINE L1 -1 6581 1296 3 610 1538 178 10 0 chrX 3316378 3316676 -163333620 - L1Md_F LINE L1 -6053 466 166 3 610 2303 30 4 0 chrX 3366790 3367061 -163283235 + L1Md_T LINE L1 5315 5586 -297 3 610 8059 40 15 1 chrX 3367061 3368041 -163282255 + L1Md_T LINE L1 5587 6580 -2 3 610 23 33 0 0 chrX 3369520 3369550 -163280746 + AT_rich Low_complexity Low_complexity 1 30 0 3 610 12504 28 7 0 chrX 3369710 3371229 -163279067 + L1_Mm LINE L1 3000 4529 -1354 3 610 761 122 0 0 chrX 3371591 3371706 -163278590 - ORR1A2 LTR MaLR 0 327 213 3 610 689 189 0 15 chrX 3371761 3371895 -163278401 - MT2B LTR ERVL -469 132 1 3 610 2650 267 40 144 chrX 3371899 3372093 -163278203 - L1_Mus3 LINE L1 -1807 4073 3890 3 610 867 187 0 0 chrX 3372093 3372243 -163278053 + B1_Mur4 SINE Alu 1 150 0 3 610 2650 267 40 144 chrX 3372243 3372523 -163277773 - L1_Mus3 LINE L1 -1991 3889 3621 3 610 6353 124 19 15 chrX 3372523 3373542 -163276754 + RLTR13D5 LTR ERVK 1 1023 0 3 610 2650 267 40 144 chrX 3373542 3373963 -163276333 - L1_Mus3 LINE L1 -2260 3620 3188 3 610 944 163 10 42 chrX 3373963 3374155 -163276141 - B2_Mm2 SINE B2 -8 187 2 3 610 7139 182 25 72 chrX 3374155 3376174 -163274122 - L1_Mus3 LINE L1 0 6638 5604 3 610 976 136 7 0 chrX 3376176 3376323 -163273973 + B1_Mus1 SINE Alu 1 148 0 3 610 5197 110 13 54 chrX 3376353 3377249 -163273047 - RLTR13A3 LTR ERVK 0 978 119 3 610 216 0 0 0 chrX 3377266 3377290 -163273006 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 610 579 143 135 0 chrX 3377358 3377484 -163272812 - Lx5 LINE L1 0 7050 6908 3 610 663 248 49 60 chrX 3377501 3377928 -163272368 - L1_Mur3 LINE L1 -4451 1429 1006 3 610 3040 119 12 37 chrX 3378350 3378837 -163271459 - MT2C_Mm LTR ERVL 0 475 1 3 610 1566 128 75 0 chrX 3379758 3380024 -163270272 - ORR1C2 LTR MaLR -4 380 95 3 610 2085 87 64 72 chrX 3380025 3380384 -163269912 + RLTR10B2 LTR ERVK 1 356 -9 3 610 586 179 27 0 chrX 3380388 3380500 -163269796 - ORR1C2 LTR MaLR -263 115 1 3 610 470 218 59 27 chrX 3380556 3380677 -163269619 - MTD LTR MaLR -14 405 282 3 610 788 190 114 6 chrX 3380746 3380921 -163269375 - URR1A DNA MER1_type 0 226 33 3 610 348 294 84 18 chrX 3380775 3380941 -163269355 + CYRA11_Mm Unknown Y-chromosome 216 392 -225 3 610 691 332 68 0 chrX 3381034 3381239 -163269057 + B4A SINE B4 1 219 -73 3 610 420 71 0 0 chrX 3381306 3381362 -163268934 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 610 235 235 52 0 chrX 3381431 3381546 -163268750 + ORR1B1-int LTR MaLR 634 754 -755 3 610 988 106 0 0 chrX 3381444 3381585 -163268711 + B1_Mus1 SINE Alu 7 147 -1 3 610 453 266 138 57 chrX 3382038 3382421 -163267875 - MER106B DNA MER1_type -201 858 445 3 610 234 356 16 41 chrX 3382437 3382560 -163267736 - MER106B DNA MER1_type -674 385 266 3 610 488 328 66 59 chrX 3382769 3383025 -163267271 - MER106B DNA MER1_type -801 258 1 3 610 707 271 28 11 chrX 3383155 3383332 -163266964 + MTE2b LTR MaLR 5 184 -195 3 610 1532 228 87 12 chrX 3383332 3383678 -163266618 - ORR1D1 LTR MaLR 0 374 3 3 610 529 302 26 68 chrX 3383681 3383873 -163266423 + MTE2b LTR MaLR 181 364 -15 3 610 1951 162 13 0 chrX 3383941 3384255 -163266041 + ORR1A3 LTR MaLR 1 318 -8 3 610 313 336 68 27 chrX 3384640 3384787 -163265509 + RMER15 LTR ERVL 422 574 -1 3 610 2035 125 29 44 chrX 3384788 3385183 -163265113 + MT2B2 LTR ERVL 155 582 -2 3 610 9729 156 61 14 chrX 3385185 3387061 -163263235 + ORR1A3-int LTR MaLR 1 1963 0 3 610 1775 188 0 9 chrX 3387061 3387384 -163262912 + ORR1A3 LTR MaLR 1 320 -6 3 610 3470 131 69 15 chrX 3387384 3387874 -163262422 + Lx LINE L1 6012 6518 -136 3 610 204 40 0 0 chrX 3387874 3387899 -163262397 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 3 610 3470 131 69 15 chrX 3387899 3388018 -163262278 + Lx LINE L1 6519 6653 -1 3 610 572 227 35 0 chrX 3388108 3388249 -163262047 - B1_Mur1 SINE Alu -2 147 2 3 610 1583 142 101 39 chrX 3389038 3389376 -163260920 + ORR1B2 LTR MaLR 1 359 -8 3 610 23 33 0 0 chrX 3390078 3390108 -163260188 + AT_rich Low_complexity Low_complexity 1 30 0 3 610 216 374 23 59 chrX 3390209 3390428 -163259868 + L2b LINE L2 2863 3073 -346 3 610 231 296 77 58 chrX 3390636 3390740 -163259556 + L2b LINE L2 3230 3335 -40 3 610 2648 231 30 58 chrX 3391033 3391397 -163258899 - RMER6D LTR ERVK -4 716 368 3 610 180 0 0 0 chrX 3391397 3391417 -163258879 + (CCA)n Simple_repeat Simple_repeat 1 20 0 3 610 2648 231 30 58 chrX 3391417 3391477 -163258819 - RMER6D LTR ERVK -353 367 315 3 610 1903 134 95 3 chrX 3391477 3391814 -163258482 + RLTR9A LTR ERVK 1 368 0 3 610 2648 231 30 58 chrX 3391814 3391900 -163258396 - RMER6D LTR ERVK -406 314 231 3 610 2318 72 122 11 chrX 3391900 3392251 -163258045 - RLTR10 LTR ERVK 0 390 1 3 610 2648 231 30 58 chrX 3392251 3392459 -163257837 - RMER6D LTR ERVK -490 230 16 3 610 2096 193 34 0 chrX 3392485 3392912 -163257384 + L1_Mur2 LINE L1 383 814 -6272 3 610 1375 116 23 23 chrX 3392915 3393172 -163257124 + L1_Mur2 LINE L1 1484 1740 -4137 3 610 5578 165 11 88 chrX 3393150 3393878 -163256418 + L1_Mur2 LINE L1 2141 2863 -3023 3 610 1792 199 48 2 chrX 3393878 3394297 -163255999 - BGLII_A LTR ERVK -7 438 1 3 610 5578 165 11 88 chrX 3394297 3395217 -163255079 + L1_Mur2 LINE L1 2864 3779 -2107 3 610 4626 219 54 4 chrX 3395654 3396177 -163254119 + L1VL4 LINE L1 859 1410 -4476 3 610 2142 106 6 0 chrX 3396177 3396488 -163253808 + L1_Mus1 LINE L1 6255 6567 0 3 610 4626 190 65 8 chrX 3396488 3397329 -163252967 + L1VL4 LINE L1 1411 2304 -3582 3 610 1712 283 68 51 chrX 3397332 3397962 -163252334 + RLTR26 LTR ERVK 2 642 0 3 610 1434 141 15 12 chrX 3397969 3398228 -163252068 + L1_Mur1 LINE L1 2308 2567 -3319 3 610 31668 91 21 6 chrX 3398230 3402945 -163247351 + L1_Mus2 LINE L1 199 5038 -848 3 610 5755 103 6 0 chrX 3402945 3403743 -163246553 + L1_Mus1 LINE L1 5765 6567 0 3 610 31668 94 21 2 chrX 3403743 3405206 -163245090 + L1_Mus2 LINE L1 5039 6568 -1 3 610 884 184 113 7 chrX 3405224 3405508 -163244788 + L1_Mur3 LINE L1 3073 3386 -2494 3 610 5740 186 40 49 chrX 3405514 3406845 -163243451 + L1_Mur3 LINE L1 4418 5736 -144 3 611 711 344 70 19 chrX 3408024 3408507 -163241789 - Lx8 LINE L1 -236 7237 6730 3 611 1496 304 75 21 chrX 3408522 3409094 -163241202 - Lx8 LINE L1 -800 6673 6071 3 611 672 279 6 44 chrX 3409442 3409801 -163240495 + RMER19A LTR ERVK 1 259 -478 3 611 351 0 0 0 chrX 3410009 3410048 -163240248 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 611 377 277 0 61 chrX 3410401 3410566 -163239730 + GA-rich Low_complexity Low_complexity 4 158 0 3 611 770 250 53 26 chrX 3413151 3413377 -163236919 - MTE2a LTR MaLR -120 259 28 3 611 433 291 60 7 chrX 3413379 3413528 -163236768 - MTE2a-int LTR MaLR 0 1580 1424 3 611 800 180 29 23 chrX 3413529 3413700 -163236596 - L1_Mur3 LINE L1 -1120 4760 4589 3 611 3083 3 5 90 chrX 3414551 3414952 -163235344 - IAPLTR1_Mm LTR ERVK 0 367 1 3 611 29713 16 1 1 chrX 3414952 3418226 -163232070 - IAPEz-int LTR ERVK 0 6481 3210 3 611 8541 78 67 29 chrX 3418225 3419541 -163230755 - IAPEz-int LTR ERVK -5168 1313 3 3 611 3083 3 5 90 chrX 3419543 3419944 -163230352 - IAPLTR1_Mm LTR ERVK 0 367 1 3 611 29 0 0 0 chrX 3421367 3421396 -163228900 + AT_rich Low_complexity Low_complexity 1 29 0 3 611 14226 136 11 8 chrX 3421425 3424512 -163225784 - L1_Mus3 LINE L1 0 6638 3542 3 611 527 296 25 16 chrX 3424953 3425197 -163225099 + RLTR15 LTR ERVK 3 248 -111 3 611 1505 236 40 0 chrX 3425297 3425624 -163224672 + ORR1B1 LTR MaLR 14 353 -41 3 611 437 155 67 88 chrX 3425624 3425788 -163224508 + B1_Mur4 SINE Alu 1 137 -13 3 611 231 197 14 27 chrX 3425795 3425868 -163224428 + (CAGAGA)n Simple_repeat Simple_repeat 4 75 0 3 611 297 51 0 0 chrX 3425868 3425907 -163224389 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 611 297 0 0 0 chrX 3425909 3425942 -163224354 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 611 450 88 0 0 chrX 3426511 3426579 -163223717 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 3 611 268 194 209 0 chrX 3426671 3426738 -163223558 + RLTR6_Mm LTR ERV1 1 81 -573 3 611 1801 117 275 49 chrX 3426778 3427229 -163223067 + RLTR6_Mm LTR ERV1 37 589 -65 3 611 33170 33 26 0 chrX 3427229 3431441 -163218855 + RLTR6-int LTR ERV1 1 4421 -3357 3 611 7307 37 1 1 chrX 3431436 3432282 -163218014 + RLTR6-int LTR ERV1 6933 7778 0 3 611 268 194 209 0 chrX 3432282 3432349 -163217947 + RLTR6_Mm LTR ERV1 1 81 -573 3 611 1745 131 272 47 chrX 3432389 3432838 -163217458 + RLTR6_Mm LTR ERV1 37 586 -68 3 611 442 234 114 21 chrX 3432836 3432976 -163217320 + ORR1D1 LTR MaLR 205 357 -17 3 611 288 93 164 18 chrX 3433245 3433300 -163216996 + RMER10B LTR ERVL 1 63 -335 3 611 325 212 83 66 chrX 3433512 3433633 -163216663 + RMER17C-int LTR ERVK 2972 3094 -144 3 611 1386 159 75 117 chrX 3433699 3434127 -163216169 - RMER17C LTR ERVK 0 410 1 3 611 1444 180 182 6 chrX 3434142 3434477 -163215819 + RMER10B LTR ERVL 5 398 0 3 611 1096 175 12 75 chrX 3434742 3434983 -163215313 - URR1A DNA MER1_type 0 226 1 3 611 29 0 0 0 chrX 3435967 3435996 -163214300 + AT_rich Low_complexity Low_complexity 1 29 0 3 611 767 196 13 20 chrX 3436231 3436382 -163213914 - B1_Mur4 SINE Alu 0 150 1 3 611 385 78 130 0 chrX 3436658 3436735 -163213561 + ORR1A2 LTR MaLR 1 87 -240 3 611 1725 110 250 0 chrX 3436737 3437065 -163213231 - ORR1A2-int LTR MaLR -535 1428 1019 3 611 299 342 51 0 chrX 3437070 3437187 -163213109 + ETnERV2-int LTR ERVK 7074 7196 -210 3 611 2849 192 34 29 chrX 3437460 3438038 -163212258 - ORR1A2-int LTR MaLR -936 1027 394 3 611 2819 68 7 106 chrX 3438038 3438288 -163212008 - MTB LTR MaLR 0 400 183 3 611 1126 82 0 0 chrX 3438288 3438434 -163211862 - B1_Mm SINE Alu 0 147 2 3 611 2819 68 7 106 chrX 3438434 3438626 -163211670 - MTB LTR MaLR -218 182 2 3 611 2849 174 18 20 chrX 3438626 3439014 -163211282 - ORR1A2-int LTR MaLR -1395 397 1 3 611 2195 125 25 0 chrX 3439014 3439333 -163210963 - ORR1A2 LTR MaLR 0 327 1 3 611 1586 131 11 0 chrX 3439333 3439608 -163210688 + ORR1A2-int LTR MaLR 1686 1963 0 3 611 1924 156 3 58 chrX 3439608 3439954 -163210342 + ORR1A2 LTR MaLR 1 327 0 3 611 231 398 14 48 chrX 3440172 3440465 -163209831 + L2b LINE L2 2791 3073 -346 3 611 211 339 0 17 chrX 3440667 3440727 -163209569 + L2b LINE L2 3221 3279 -96 3 611 2556 218 70 37 chrX 3441074 3441410 -163208886 - RMER6D LTR ERVK 0 720 366 3 611 321 68 0 0 chrX 3441410 3441454 -163208842 + (CCA)n Simple_repeat Simple_repeat 3 46 0 3 611 2556 218 70 37 chrX 3441454 3441511 -163208785 - RMER6D LTR ERVK -355 365 315 3 611 1834 152 95 6 chrX 3441511 3441849 -163208447 + RLTR9A LTR ERVK 1 368 0 3 611 2556 218 70 37 chrX 3441849 3442136 -163208160 - RMER6D LTR ERVK -406 314 16 3 611 274 139 0 0 chrX 3442162 3442205 -163208091 + L1_Mur2 LINE L1 151 193 -6519 3 611 316 68 0 0 chrX 3442222 3442266 -163208030 + RLTR1 LTR ERV1 581 624 0 3 611 4051 161 151 1 chrX 3442266 3443079 -163207217 + L1_Mur2 LINE L1 410 1344 -5742 3 611 1724 117 11 4 chrX 3443091 3443366 -163206930 + L1_Mur2 LINE L1 1470 1746 -4131 3 611 8523 130 30 18 chrX 3443337 3444060 -163206236 + L1_Mur2 LINE L1 2140 2850 -3027 3 611 1960 184 47 5 chrX 3444060 3444487 -163205809 - BGLII_A LTR ERVK 0 445 1 3 611 8523 130 30 18 chrX 3444487 3445373 -163204923 + L1_Mur2 LINE L1 2851 3769 -2108 3 611 1456 216 46 7 chrX 3445820 3446221 -163204075 + L1VL4 LINE L1 514 932 -5370 3 611 1949 130 7 0 chrX 3446221 3446528 -163203768 + L1_Mus1 LINE L1 6259 6567 0 3 611 9475 181 172 144 chrX 3446536 3447394 -163202902 + L1_Mur2 LINE L1 1426 2227 -3650 3 611 1494 264 38 30 chrX 3447394 3447858 -163202438 + RLTR26 LTR ERVK 1 496 -146 3 611 9475 181 172 144 chrX 3447858 3448086 -163202210 + L1_Mur2 LINE L1 2228 2442 -3435 3 611 2898 84 5 2 chrX 3448086 3448481 -163201815 + MTA_Mm LTR MaLR 1 396 0 3 611 9475 181 172 144 chrX 3448481 3450272 -163200024 + L1_Mur2 LINE L1 2443 4251 -1626 3 611 1146 144 0 5 chrX 3450272 3450461 -163199835 + B2_Mm2 SINE B2 1 188 -7 4 611 9475 189 162 135 chrX 3450461 3451331 -163198965 + L1_Mur2 LINE L1 4252 5793 -371 3 611 2289 204 19 7 chrX 3451321 3451786 -163198510 + Lx4A LINE L1 6493 6963 -95 4 611 1035 31 0 0 chrX 3451786 3451914 -163198382 - RLTR6-int LTR ERV1 -7650 128 1 4 611 1969 131 250 28 chrX 3451915 3452379 -163197917 - RLTR6_Mm LTR ERV1 -51 603 37 4 611 259 228 200 38 chrX 3452381 3452486 -163197810 - RLTR6_Mm LTR ERV1 -532 122 1 4 611 522 79 0 0 chrX 3452578 3452654 -163197642 + (TTCC)n Simple_repeat Simple_repeat 3 78 0 4 611 441 0 0 0 chrX 3453223 3453272 -163197024 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 611 441 36 0 0 chrX 3453274 3453329 -163196967 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 611 231 197 14 27 chrX 3453331 3453404 -163196892 + (TCTCTG)n Simple_repeat Simple_repeat 4 75 0 4 611 464 186 0 183 chrX 3453411 3453575 -163196721 - B1_Mus2 SINE Alu -13 134 1 4 611 1627 236 40 0 chrX 3453575 3453902 -163196394 - ORR1B1 LTR MaLR -41 353 14 4 611 649 303 25 21 chrX 3453963 3454246 -163196050 - RLTR15 LTR ERVK -73 286 3 4 611 902 104 0 7 chrX 3454721 3454866 -163195430 + L1_Mus3 LINE L1 2241 2384 -3499 4 611 13256 136 9 8 chrX 3454860 3457956 -163192340 + L1_Mus3 LINE L1 3531 6632 -6 4 611 29 0 0 0 chrX 3457991 3458020 -163192276 + AT_rich Low_complexity Low_complexity 1 29 0 4 611 723 180 29 23 chrX 3460287 3460458 -163189838 + L1_Mur3 LINE L1 4589 4760 -1120 4 611 483 284 60 7 chrX 3460459 3460608 -163189688 + MTE2a-int LTR MaLR 1424 1580 0 4 611 896 288 77 35 chrX 3460610 3460948 -163189348 + MTE2a LTR MaLR 28 379 0 4 611 377 277 0 61 chrX 3463421 3463586 -163186710 + CT-rich Low_complexity Low_complexity 4 158 0 4 611 477 0 0 0 chrX 3463939 3463992 -163186304 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 611 740 279 6 44 chrX 3464200 3464559 -163185737 - RMER19A LTR ERVK -478 259 1 4 611 1330 304 75 21 chrX 3464907 3465479 -163184817 + Lx8 LINE L1 6071 6673 -800 4 611 612 347 66 16 chrX 3465494 3465978 -163184318 + Lx8 LINE L1 6730 7237 -236 4 611 5145 190 40 47 chrX 3467157 3468486 -163181810 - L1_Mur3 LINE L1 -144 5736 4418 4 611 840 188 113 7 chrX 3468492 3468776 -163181520 - L1_Mur3 LINE L1 -2494 3386 3073 4 611 6507 116 12 2 chrX 3468794 3470251 -163180045 - L1_Mus2 LINE L1 -1 6565 5092 4 611 21513 126 14 13 chrX 3470259 3474827 -163175469 - L1_Mus1 LINE L1 0 6657 2004 4 611 317 0 0 0 chrX 3474855 3474899 -163175397 - L1Md_T LINE L1 -2 6580 6537 4 611 25950 27 1 0 chrX 3474899 3478814 -163171482 - L1Md_T LINE L1 -3 6579 2661 4 611 4564 163 65 8 chrX 3478814 3480220 -163170076 - L1_Mus1 LINE L1 -1901 2016 527 4 611 560 276 64 121 chrX 3480226 3480703 -163169593 - L1VL1 LINE L1 -6027 395 27 4 611 642 151 33 46 chrX 3480903 3481056 -163169240 - L1Md_F2 LINE L1 -4 6580 6430 4 611 28413 101 34 13 chrX 3481068 3483056 -163167240 - L1Md_F2 LINE L1 -262 6320 4352 4 611 3329 26 15 0 chrX 3483056 3483446 -163166850 + MTA_Mm LTR MaLR 1 396 0 4 611 28413 99 33 16 chrX 3483446 3484214 -163166082 - L1Md_F2 LINE L1 -1532 4351 3489 4 611 318 26 0 0 chrX 3484214 3484253 -163166043 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 4 611 28413 99 27 15 chrX 3484253 3486766 -163163530 - L1Md_F2 LINE L1 -2395 3488 951 4 611 2033 206 77 2 chrX 3486766 3487208 -163163088 - MERVL_2A-int LTR ERVL -2157 3604 3130 4 611 269 161 18 0 chrX 3487245 3487301 -163162995 + MERVL_2A-int LTR ERVL 2209 2265 -3496 4 611 4662 103 39 12 chrX 3487808 3488584 -163161712 + L1_Mur2 LINE L1 4827 5623 -254 4 611 4608 162 8 3 chrX 3488578 3489453 -163160843 - L1_Mur2 LINE L1 -1052 4825 3947 4 611 180 0 0 0 chrX 3489543 3489563 -163160733 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 4 611 603 205 160 28 chrX 3489564 3489781 -163160515 + Lx4B LINE L1 6788 7054 -4 4 611 2797 26 2 204 chrX 3490168 3490657 -163159639 - RLTR10 LTR ERVK 0 390 1 4 611 15050 29 18 30 chrX 3490659 3492626 -163157670 - RLTR10-int LTR ERVK -3 1984 41 4 611 2797 26 2 204 chrX 3492636 3493125 -163157171 - RLTR10 LTR ERVK 0 390 1 4 611 189 0 0 0 chrX 3493200 3493221 -163157075 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 4 611 4743 75 11 5 chrX 3493250 3493889 -163156407 - L1_Mus1 LINE L1 0 6567 5925 4 611 4255 132 8 56 chrX 3493889 3494691 -163155605 - RMER17A LTR ERVK -2 749 1 4 611 4826 72 5 26 chrX 3494691 3495498 -163154798 - L1_Mus1 LINE L1 -635 5932 5154 4 611 1039 97 0 0 chrX 3495495 3495650 -163154646 + L1_Mus1 LINE L1 4992 5146 -737 4 611 957 156 0 0 chrX 3496237 3496378 -163153918 - B1_Mur4 SINE Alu -9 141 1 4 611 21 0 0 0 chrX 3496378 3496399 -163153897 + AT_rich Low_complexity Low_complexity 1 21 0 4 611 784 279 66 52 chrX 3496439 3496784 -163153512 + MTEa LTR MaLR 13 379 0 4 611 324 125 0 0 chrX 3497045 3497109 -163153187 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 611 279 54 0 0 chrX 3497109 3497146 -163153150 + (GA)n Simple_repeat Simple_repeat 1 37 0 4 611 1435 189 10 0 chrX 3497845 3498152 -163152144 + L1Md_F LINE L1 254 563 -6053 4 611 13689 51 1 1 chrX 3498149 3500000 -163150296 + L1Md_F LINE L1 1301 3151 -2732 4 611 19764 19 4 1 chrX 3500000 3502428 -163147868 + L1Md_T LINE L1 3152 5586 -297 1 611 8105 38 15 2 chrX 3502428 3503409 -163146887 + L1Md_T LINE L1 5587 6580 -2 1 611 23 33 0 0 chrX 3504889 3504919 -163145377 + AT_rich Low_complexity Low_complexity 1 30 0 2 611 537 266 148 10 chrX 3505177 3505488 -163144808 - L1MD2 LINE L1 -368 5991 5638 3 611 5376 120 20 5 chrX 3505510 3506349 -163143947 - L1_Mus3 LINE L1 0 6638 5787 4 611 2394 79 0 0 chrX 3506367 3506707 -163143589 + L1_Mm LINE L1 4190 4529 -1354 5 611 762 122 0 0 chrX 3507069 3507184 -163143112 - ORR1A2 LTR MaLR 0 327 213 6 611 693 189 0 15 chrX 3507239 3507373 -163142923 - MT2B LTR ERVL -469 132 1 7 611 2607 237 45 68 chrX 3507377 3507571 -163142725 - L1_Mur3 LINE L1 -1807 4073 3890 8 611 893 180 0 0 chrX 3507571 3507721 -163142575 + B1_Mur4 SINE Alu 1 150 0 9 611 2607 237 45 68 chrX 3507721 3508001 -163142295 - L1_Mur3 LINE L1 -1991 3889 3621 8 611 6361 123 19 15 chrX 3508001 3509020 -163141276 + RLTR13D5 LTR ERVK 1 1023 0 1 611 2607 237 45 68 chrX 3509020 3509441 -163140855 - L1_Mur3 LINE L1 -2260 3620 3188 8 611 972 143 21 52 chrX 3509441 3509633 -163140663 - B2_Mm2 SINE B2 -8 187 2 1 611 2607 237 45 68 chrX 3509633 3509787 -163140509 - L1_Mur3 LINE L1 -2693 3187 3047 8 611 427 137 0 31 chrX 3509788 3509886 -163140410 + CT-rich Low_complexity Low_complexity 2 96 0 1 611 6771 100 11 3 chrX 3509908 3510935 -163139361 - L1_Mus3 LINE L1 0 6638 5604 1 611 2016 225 28 46 chrX 3510941 3511654 -163138642 - L1_Mur3 LINE L1 -3722 2158 1459 8 611 983 136 7 0 chrX 3511656 3511803 -163138493 + B1_Mus1 SINE Alu 1 148 0 1 611 5266 106 13 54 chrX 3511833 3512729 -163137567 - RLTR13A3 LTR ERVK 0 978 119 1 611 216 0 0 0 chrX 3512746 3512770 -163137526 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 611 554 146 131 0 chrX 3512838 3512968 -163137328 - Lx5 LINE L1 0 7050 6904 1 611 670 261 62 56 chrX 3512981 3513393 -163136903 - L1_Mur3 LINE L1 -4451 1429 1009 8 611 281 0 82 0 chrX 3513393 3513442 -163136854 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 1 611 670 254 70 70 chrX 3513442 3513561 -163136735 - L1_Mur3 LINE L1 -6720 1008 894 8 611 3046 119 12 37 chrX 3513836 3514323 -163135973 - MT2C_Mm LTR ERVL 0 475 1 1 611 1511 143 75 0 chrX 3515244 3515510 -163134786 - ORR1C2 LTR MaLR -4 380 95 2 611 2069 102 64 72 chrX 3515511 3515870 -163134426 + RLTR10B2 LTR ERVK 1 356 -9 2 611 596 170 27 0 chrX 3515874 3515986 -163134310 - ORR1C2 LTR MaLR -263 115 1 2 611 432 218 62 28 chrX 3516042 3516162 -163134134 - MTD LTR MaLR -14 405 282 2 611 801 184 114 6 chrX 3516233 3516408 -163133888 - URR1A DNA MER1_type 0 226 33 2 611 363 288 84 18 chrX 3516262 3516428 -163133868 + CYRA11_Mm Unknown Y-chromosome 216 392 -225 2 611 698 332 68 0 chrX 3516521 3516726 -163133570 + B4A SINE B4 1 219 -73 2 611 345 100 0 0 chrX 3516793 3516843 -163133453 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 611 1072 102 0 0 chrX 3516919 3517066 -163133230 + B1_Mus1 SINE Alu 1 147 -1 2 611 379 271 136 55 chrX 3517518 3517901 -163132395 - MER106B DNA MER1_type -201 858 445 2 611 231 356 16 41 chrX 3517917 3518040 -163132256 - MER106B DNA MER1_type -674 385 266 2 611 500 322 62 55 chrX 3518249 3518505 -163131791 - MER106B DNA MER1_type -801 258 1 2 611 706 271 28 11 chrX 3518635 3518812 -163131484 + MTE2b LTR MaLR 5 184 -195 2 611 1520 231 87 12 chrX 3518812 3519158 -163131138 - ORR1D1 LTR MaLR 0 374 3 3 611 560 291 26 68 chrX 3519161 3519353 -163130943 + MTE2b LTR MaLR 181 364 -15 2 611 1965 162 13 0 chrX 3519421 3519735 -163130561 + ORR1A3 LTR MaLR 1 318 -8 3 611 277 354 68 27 chrX 3520120 3520268 -163130028 + RMER15 LTR ERVL 422 575 0 3 611 2129 116 29 45 chrX 3520268 3520663 -163129633 + MT2B2 LTR ERVL 155 582 -2 3 611 9857 149 63 18 chrX 3520665 3522542 -163127754 + ORR1A3-int LTR MaLR 1 1963 0 3 611 1782 188 0 9 chrX 3522542 3522865 -163127431 + ORR1A3 LTR MaLR 1 320 -6 3 611 3462 133 69 18 chrX 3522865 3523357 -163126939 + Lx LINE L1 6012 6518 -136 3 611 204 40 0 0 chrX 3523357 3523382 -163126914 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 3 611 3462 133 69 18 chrX 3523382 3523501 -163126795 + Lx LINE L1 6519 6653 -1 3 611 582 227 35 0 chrX 3523591 3523732 -163126564 - B1_Mur1 SINE Alu -2 147 2 3 611 1726 138 101 39 chrX 3524520 3524858 -163125438 + ORR1B2 LTR MaLR 1 359 -8 3 611 23 33 0 0 chrX 3525560 3525590 -163124706 + AT_rich Low_complexity Low_complexity 1 30 0 3 611 320 360 65 64 chrX 3525634 3526222 -163124074 + L2a LINE L2 2796 3386 -40 4 611 2967 227 30 55 chrX 3526511 3526879 -163123417 - RMER6D LTR ERVK 0 720 363 4 611 198 0 0 0 chrX 3526879 3526901 -163123395 + (CCA)n Simple_repeat Simple_repeat 2 23 0 4 611 2967 227 30 55 chrX 3526901 3526959 -163123337 - RMER6D LTR ERVK -358 362 315 4 611 1848 139 92 3 chrX 3526959 3527297 -163122999 + RLTR9A LTR ERVK 1 368 0 4 611 2967 227 30 55 chrX 3527297 3527383 -163122913 - RMER6D LTR ERVK -406 314 231 4 611 2303 69 122 11 chrX 3527383 3527734 -163122562 - RLTR10 LTR ERVK 0 390 1 4 611 2967 227 30 55 chrX 3527734 3527942 -163122354 - RMER6D LTR ERVK -490 230 16 4 611 1930 187 36 0 chrX 3527968 3528394 -163121902 + L1_Mur2 LINE L1 383 814 -6272 4 611 1298 104 27 23 chrX 3528397 3528653 -163121643 + L1_Mur2 LINE L1 1484 1740 -4137 4 611 5211 164 11 89 chrX 3528631 3529359 -163120937 + L1_Mur2 LINE L1 2149 2867 -3019 4 611 1944 199 48 2 chrX 3529359 3529778 -163120518 - BGLII_A LTR ERVK -7 438 1 4 611 5211 164 11 89 chrX 3529778 3530699 -163119597 + L1_Mur2 LINE L1 2868 3779 -2107 4 611 4179 217 53 4 chrX 3531145 3531659 -163118637 + L1VL4 LINE L1 869 1410 -4476 4 611 2063 112 6 0 chrX 3531659 3531970 -163118326 + L1_Mus1 LINE L1 6255 6567 0 4 611 4179 192 63 8 chrX 3531970 3532813 -163117483 + L1VL4 LINE L1 1411 2304 -3582 4 611 1924 287 67 49 chrX 3532816 3533446 -163116850 + RLTR26 LTR ERVK 2 642 0 4 611 1350 129 15 15 chrX 3533453 3533713 -163116583 + Lx4A LINE L1 2308 2567 -3319 5 76 31419 72 2 4 chrX 3533715 3539021 -163111275 + L1Md_A LINE L1 199 5589 -297 5 612 8125 47 1 0 chrX 3539021 3540016 -163110280 + L1Md_A LINE L1 5590 6585 0 5 612 2460 151 124 19 chrX 3540016 3540612 -163109684 + Lx4A LINE L1 3038 3696 -2190 5 612 2824 178 11 0 chrX 3541116 3541678 -163108618 + Lx4A LINE L1 3684 4251 -1626 5 612 1338 96 0 11 chrX 3541678 3541867 -163108429 + B2_Mm2 SINE B2 1 187 -8 5 612 393 22 0 0 chrX 3541944 3541990 -163108306 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 5 612 917 148 0 0 chrX 3541999 3542134 -163108162 - B1_Mus2 SINE Alu -8 139 5 5 612 3971 159 47 6 chrX 3542141 3542951 -163107345 + Lx4A LINE L1 4922 5882 -1168 5 612 2674 203 22 13 chrX 3542951 3543489 -163106807 + Lx4A LINE L1 6515 7057 -1 5 612 4152 213 44 13 chrX 3544138 3545007 -163105289 - RMER19B LTR ERVK -6 896 1 5 612 222 62 0 0 chrX 3548192 3548224 -163102072 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 612 649 112 27 20 chrX 3549075 3549221 -163101075 + (TA)n Simple_repeat Simple_repeat 2 148 0 5 612 6301 117 12 2 chrX 3549835 3550943 -163099353 - L1_Mus3 LINE L1 0 6638 5515 5 612 17211 153 22 18 chrX 3550961 3553281 -163097015 - L1_Mus3 LINE L1 -1270 4613 2278 5 612 2534 87 6 9 chrX 3553281 3553628 -163096668 + ORR1A1 LTR MaLR 1 346 0 5 612 17211 153 22 18 chrX 3553628 3553828 -163096468 - L1_Mus3 LINE L1 -3606 2277 2071 5 612 207 0 0 0 chrX 3553828 3553851 -163096445 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 612 17211 155 21 38 chrX 3553851 3555557 -163094739 - L1_Mus3 LINE L1 -3813 2070 410 5 612 902 252 58 10 chrX 3556021 3556229 -163094067 + RLTR41 LTR ERV1 229 446 0 6 612 1356 229 56 6 chrX 3556233 3556563 -163093733 - ORR1B1-int LTR MaLR -852 728 325 6 612 2870 113 75 2 chrX 3556563 3557059 -163093237 - RLTR47_MM LTR ERV1 0 532 1 6 612 189 0 0 0 chrX 3557346 3557367 -163092929 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 6 612 1730 176 39 34 chrX 3557670 3558052 -163092244 + LTRIS4 LTR ERV1 124 507 0 6 612 2265 152 17 22 chrX 3558179 3558590 -163091706 + RLTR9E LTR ERVK 1 409 0 6 612 659 195 26 87 chrX 3558599 3558859 -163091437 + MMETn-int LTR ERVK 10 317 -2997 6 612 308 100 0 20 chrX 3558914 3558965 -163091331 + ETnERV2-int LTR ERVK 2091 2140 -5104 6 612 272 111 0 0 chrX 3559415 3559460 -163090836 + RMER16-int LTR ERVK 144 188 -5218 6 612 597 165 26 9 chrX 3559535 3559651 -163090645 + RMER16-int LTR ERVK 1089 1206 -4200 6 612 478 264 0 63 chrX 3559675 3559833 -163090463 + ETnERV2-int LTR ERVK 2461 2608 -4798 6 612 16911 119 26 4 chrX 3559833 3560667 -163089629 + ETnERV2-int LTR ERVK 3055 3932 -3474 6 612 429 20 0 0 chrX 3560667 3560717 -163089579 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 612 16911 119 26 4 chrX 3560717 3562548 -163087748 + ETnERV2-int LTR ERVK 3933 5778 -1628 6 612 1087 101 13 0 chrX 3562549 3562707 -163087589 + B2_Mm1t SINE B2 1 160 -33 7 612 193 0 29 59 chrX 3562707 3562741 -163087555 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 7 612 3138 135 5 60 chrX 3562750 3563482 -163086814 + ETnERV2-int LTR ERVK 5766 6221 -1185 6 612 414 103 0 29 chrX 3563698 3563768 -163086528 + ETnERV2-int LTR ERVK 7336 7403 -3 6 612 2385 155 5 14 chrX 3563770 3564183 -163086113 + RLTR9E LTR ERVK 1 409 0 6 612 13065 103 63 11 chrX 3564273 3567703 -163082593 + MuRRS4-int LTR ERV1 180 3789 -1274 7 612 537 254 183 36 chrX 3567764 3568120 -163082176 + L1M2 LINE L1 4383 4790 -1353 7 612 259 181 14 14 chrX 3568163 3568236 -163082060 + (CATATA)n Simple_repeat Simple_repeat 2 74 0 7 612 2761 275 87 46 chrX 3568239 3568578 -163081718 + Lx8 LINE L1 6174 6509 -964 7 612 594 28 0 0 chrX 3568578 3568650 -163081646 + (TG)n Simple_repeat Simple_repeat 1 72 0 7 612 2761 275 87 46 chrX 3568650 3569202 -163081094 + Lx8 LINE L1 6510 7118 -355 7 612 1160 69 0 0 chrX 3569202 3569347 -163080949 + B1_Mus2 SINE Alu 1 145 -2 7 612 2761 275 87 46 chrX 3569347 3569371 -163080925 + Lx8 LINE L1 7119 7122 -351 7 612 690 47 0 0 chrX 3569371 3569457 -163080839 + (GAAA)n Simple_repeat Simple_repeat 2 87 0 7 612 2761 275 87 46 chrX 3569457 3569783 -163080513 + Lx8 LINE L1 7123 7467 -6 7 612 22 35 0 0 chrX 3569783 3569812 -163080484 + AT_rich Low_complexity Low_complexity 1 29 0 7 612 1161 266 55 33 chrX 3569905 3570267 -163080029 + ORR1D2 LTR MaLR 1 370 0 8 612 803 258 14 27 chrX 3570267 3570486 -163079810 + ORR1D2-int LTR MaLR 1 216 -1154 8 612 380 256 89 35 chrX 3570591 3570626 -163079670 - RMER17C LTR ERVK -197 213 181 8 612 844 26 32 38 chrX 3570626 3570784 -163079512 + (GAGAA)n Simple_repeat Simple_repeat 5 161 0 8 612 380 256 89 35 chrX 3570784 3570950 -163079346 - RMER17C LTR ERVK -230 180 1 8 612 639 256 74 37 chrX 3570950 3571168 -163079128 + ORR1D2-int LTR MaLR 230 471 -1038 8 612 2027 151 67 6 chrX 3571168 3571514 -163078782 + ORR1B2 LTR MaLR 1 367 0 8 612 621 258 30 41 chrX 3571514 3571636 -163078660 + ORR1D2-int LTR MaLR 472 621 -749 8 612 17707 97 2 8 chrX 3571638 3574455 -163075841 - L1_Mm LINE L1 -1937 3946 1147 8 612 11992 92 1 42 chrX 3574461 3576368 -163073928 + L1_Mm LINE L1 3940 5767 -116 8 612 235 263 0 0 chrX 3576370 3576427 -163073869 - Lx9 LINE L1 -387 7257 7201 8 612 4259 142 9 25 chrX 3576460 3577405 -163072891 - L1Md_A LINE L1 -4460 1423 498 8 612 662 105 73 0 chrX 3577406 3577530 -163072766 + L1Md_F2 LINE L1 6450 6582 0 8 612 883 289 23 40 chrX 3577533 3577929 -163072367 + Lx8 LINE L1 6138 6526 -947 8 612 1538 164 103 103 chrX 3578001 3578430 -163071866 + RMER16 LTR ERVK 105 533 0 8 612 1703 174 31 116 chrX 3578498 3578980 -163071316 - RMER10A LTR ERVL 0 442 2 9 612 1788 206 75 40 chrX 3579037 3579466 -163070830 - RLTR41 LTR ERV1 -2 444 1 9 612 542 326 16 16 chrX 3579468 3579711 -163070585 + Lx8 LINE L1 6724 6966 -507 8 612 270 290 0 14 chrX 3579725 3579795 -163070501 + B1F2 SINE Alu 1 69 -80 9 612 957 310 40 116 chrX 3579788 3580442 -163069854 - RLTR18 LTR ERVK -10 606 3 9 612 326 230 138 0 chrX 3580447 3580534 -163069762 + B1_Mur2 SINE Alu 49 147 -2 9 612 1067 79 43 0 chrX 3580566 3580705 -163069591 + B1_Mm SINE Alu 3 147 0 9 612 819 122 0 0 chrX 3580710 3580841 -163069455 + (GA)n Simple_repeat Simple_repeat 2 132 0 9 612 1105 303 58 40 chrX 3580841 3581297 -163068999 + Lx7 LINE L1 5694 6159 -1537 9 612 3087 92 25 39 chrX 3581297 3581786 -163068510 + RLTR45 LTR ERVK 1 482 0 9 612 1105 303 58 40 chrX 3581786 3581843 -163068453 + Lx7 LINE L1 6160 6208 -1488 9 612 1234 136 0 33 chrX 3581843 3582056 -163068240 - Lx2 LINE L1 0 6997 6792 9 612 1105 303 58 40 chrX 3582056 3582149 -163068147 + Lx7 LINE L1 6209 6312 -1384 9 612 821 99 14 0 chrX 3582761 3582903 -163067393 + Lx LINE L1 6511 6654 0 1 612 661 126 23 8 chrX 3582993 3583121 -163067175 + Lx4A LINE L1 6910 7039 -19 1 612 443 73 15 0 chrX 3583121 3583189 -163067107 + (TAAA)n Simple_repeat Simple_repeat 2 70 0 1 612 576 186 16 41 chrX 3583270 3583393 -163066903 + PB1D9 SINE Alu 1 120 0 1 612 720 172 78 0 chrX 3583589 3583717 -163066579 - B1_Mur2 SINE Alu 0 149 12 1 612 1165 156 28 28 chrX 3583749 3583967 -163066329 - Lx9 LINE L1 -617 7027 6810 1 612 441 151 22 55 chrX 3583966 3584057 -163066239 + Lx9 LINE L1 7130 7217 -427 1 612 1964 155 49 16 chrX 3584059 3584427 -163065869 - RLTR11B LTR ERVK -3 450 71 1 612 3056 152 19 24 chrX 3634430 3634867 -163015429 - L1VL4 LINE L1 -2996 2890 2452 1 612 2959 81 5 2 chrX 3634867 3635262 -163015034 - MTA_Mm LTR MaLR 0 396 1 1 612 3056 152 19 24 chrX 3635262 3635412 -163014884 - L1VL4 LINE L1 -3435 2451 2306 1 612 1496 277 75 62 chrX 3635414 3635964 -163014332 - RLTR26 LTR ERVK -85 557 1 1 612 4119 178 48 12 chrX 3635964 3636822 -163013474 - L1VL4 LINE L1 -3582 2304 1415 1 612 1966 130 7 0 chrX 3636822 3637129 -163013167 - L1_Mus1 LINE L1 0 6567 6259 1 612 3242 221 50 14 chrX 3637129 3637539 -163012757 - L1VL4 LINE L1 -4463 1414 859 1 612 9149 132 30 17 chrX 3637977 3638862 -163011434 - L1_Mur2 LINE L1 -2107 3770 2878 1 612 2031 181 47 5 chrX 3638862 3639289 -163011007 + BGLII_A LTR ERVK 1 445 0 1 612 9149 132 30 17 chrX 3639289 3640013 -163010283 - L1_Mur2 LINE L1 -3000 2877 2142 1 612 4034 136 205 2 chrX 3639984 3641083 -163009213 - L1_Mur2 LINE L1 -4131 1746 410 1 612 328 45 0 0 chrX 3641083 3641127 -163009169 - RLTR1 LTR ERV1 0 624 581 1 612 274 139 0 0 chrX 3641144 3641187 -163009109 - L1_Mur2 LINE L1 -6519 193 151 1 612 2592 219 69 35 chrX 3641213 3641500 -163008796 + RMER6D LTR ERVK 16 314 -406 1 612 1973 148 69 6 chrX 3641500 3641846 -163008450 - RLTR9A LTR ERVK 0 368 1 1 612 2592 219 69 35 chrX 3641846 3641903 -163008393 + RMER6D LTR ERVK 315 365 -355 1 612 477 84 0 0 chrX 3641903 3641974 -163008322 + (TGG)n Simple_repeat Simple_repeat 3 73 0 1 612 2592 219 69 35 chrX 3641974 3642310 -163007986 + RMER6D LTR ERVK 366 720 0 1 612 211 339 0 17 chrX 3642657 3642717 -163007579 - L2b LINE L2 -96 3279 3221 1 612 256 406 7 41 chrX 3642919 3643212 -163007084 - L2b LINE L2 -346 3073 2791 1 612 1899 159 3 58 chrX 3643430 3643776 -163006520 - ORR1A2 LTR MaLR 0 327 1 1 612 1586 131 11 0 chrX 3643776 3644051 -163006245 - ORR1A2-int LTR MaLR 0 1963 1686 1 612 2170 128 25 0 chrX 3644051 3644370 -163005926 + ORR1A2 LTR MaLR 1 327 0 1 612 2828 176 18 20 chrX 3644370 3644758 -163005538 + ORR1A2-int LTR MaLR 1 397 -1395 1 612 2817 66 7 118 chrX 3644758 3644950 -163005346 + MTB LTR MaLR 2 182 -218 1 612 1137 75 0 0 chrX 3644950 3645096 -163005200 + B1_Mm SINE Alu 2 147 0 1 612 2817 66 7 118 chrX 3645096 3645352 -163004944 + MTB LTR MaLR 183 400 0 1 612 2828 185 36 25 chrX 3645352 3645930 -163004366 + ORR1A2-int LTR MaLR 393 1027 -936 1 612 279 350 51 0 chrX 3646203 3646320 -163003976 - ETnERV2-int LTR ERVK -210 7196 7074 1 612 1700 116 250 0 chrX 3646325 3646653 -163003643 + ORR1A2-int LTR MaLR 1019 1428 -535 1 612 385 78 130 0 chrX 3646655 3646732 -163003564 - ORR1A2 LTR MaLR -240 87 1 1 612 794 189 13 20 chrX 3647008 3647159 -163003137 + B1_Mur4 SINE Alu 1 150 0 1 612 29 0 0 0 chrX 3647394 3647423 -163002873 + AT_rich Low_complexity Low_complexity 1 29 0 1 612 1077 188 13 22 chrX 3648405 3648458 -163001838 + URR1A DNA MER1_type 1 51 -175 1 612 480 86 0 0 chrX 3648458 3648528 -163001768 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 612 1077 188 13 22 chrX 3648528 3648702 -163001594 + URR1A DNA MER1_type 52 226 0 1 612 1440 183 182 6 chrX 3648967 3649302 -163000994 - RMER10B LTR ERVL 0 398 5 1 612 1284 156 74 119 chrX 3649317 3649738 -163000558 + RMER17C LTR ERVK 1 402 -8 1 612 325 212 83 66 chrX 3649811 3649932 -163000364 - RMER17C-int LTR ERVK -144 3094 2972 1 612 299 93 164 18 chrX 3650144 3650199 -163000097 - RMER10B LTR ERVL -335 63 1 1 612 442 234 114 21 chrX 3650468 3650608 -162999688 - ORR1D1 LTR MaLR -17 357 205 1 612 1716 133 272 47 chrX 3650606 3651055 -162999241 - RLTR6_Mm LTR ERV1 -68 586 37 1 612 268 194 209 0 chrX 3651095 3651162 -162999134 - RLTR6_Mm LTR ERV1 -573 81 1 1 612 7377 34 1 0 chrX 3651162 3652007 -162998289 - RLTR6-int LTR ERV1 0 7778 6933 1 612 32837 43 30 2 chrX 3652002 3656078 -162994218 - RLTR6-int LTR ERV1 -3357 4421 8 1 612 1817 114 275 49 chrX 3656078 3656529 -162993767 - RLTR6_Mm LTR ERV1 -65 589 37 1 612 262 209 209 0 chrX 3656569 3656636 -162993660 - RLTR6_Mm LTR ERV1 -573 81 1 1 612 450 88 0 0 chrX 3656728 3656796 -162993500 + (TTCC)n Simple_repeat Simple_repeat 3 70 0 1 612 225 0 0 0 chrX 3657365 3657390 -162992906 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 612 513 32 0 0 chrX 3657392 3657455 -162992841 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 612 206 211 14 27 chrX 3657455 3657528 -162992768 + (TCTCTG)n Simple_repeat Simple_repeat 4 75 0 1 612 437 157 67 84 chrX 3657535 3657699 -162992597 - B1_Mur4 SINE Alu -13 137 1 1 612 1528 229 40 0 chrX 3657699 3658026 -162992270 - ORR1B1 LTR MaLR -41 353 14 1 612 527 296 25 16 chrX 3658126 3658370 -162991926 - RLTR15 LTR ERVK -111 248 3 1 612 989 159 10 13 chrX 3658810 3659003 -162991293 + L1_Mus3 LINE L1 2228 2422 -3724 1 612 14249 137 11 8 chrX 3658985 3662080 -162988216 + L1_Mus3 LINE L1 3531 6638 0 1 612 29 0 0 0 chrX 3662109 3662138 -162988158 + AT_rich Low_complexity Low_complexity 1 29 0 1 612 800 180 29 23 chrX 3664404 3664575 -162985721 + L1_Mur3 LINE L1 4589 4760 -1120 1 612 433 291 60 7 chrX 3664576 3664725 -162985571 + MTE2a-int LTR MaLR 1424 1580 0 1 612 748 254 53 26 chrX 3664727 3664953 -162985343 + MTE2a LTR MaLR 28 259 -120 1 612 377 277 0 61 chrX 3667538 3667703 -162982593 + CT-rich Low_complexity Low_complexity 4 158 0 1 612 396 0 0 0 chrX 3668055 3668099 -162982197 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 612 745 281 6 44 chrX 3668307 3668666 -162981630 - RMER19A LTR ERVK -478 259 1 1 612 1328 301 79 21 chrX 3669014 3669584 -162980712 + Lx8 LINE L1 6071 6673 -800 1 76 573 348 70 17 chrX 3669599 3670081 -162980215 + Lx8 LINE L1 6730 7237 -236 1 613 5110 188 40 54 chrX 3671260 3671749 -162978547 - L1_Mur3 LINE L1 -144 5736 5234 1 613 7271 12 5 5 chrX 3671749 3672571 -162977725 - RLTR13B2 LTR ERVK 0 822 1 1 613 5110 188 40 54 chrX 3672571 3673419 -162976877 - L1_Mur3 LINE L1 -647 5233 4418 1 613 794 191 113 7 chrX 3673425 3673709 -162976587 - L1_Mur3 LINE L1 -2494 3386 3073 1 613 29467 94 21 3 chrX 3673727 3675191 -162975105 - L1_Mus2 LINE L1 -1 6568 5039 1 613 5628 104 6 0 chrX 3675191 3675989 -162974307 - L1_Mus1 LINE L1 0 6567 5765 1 613 29467 92 20 7 chrX 3675989 3680707 -162969589 - L1_Mus2 LINE L1 -848 5038 199 1 613 1329 141 15 12 chrX 3680709 3680968 -162969328 - L1VL4 LINE L1 -3319 2567 2308 1 613 1959 278 68 51 chrX 3680975 3681605 -162968691 - RLTR26 LTR ERVK 0 642 2 1 613 4223 191 65 8 chrX 3681608 3682449 -162967847 - L1VL4 LINE L1 -3582 2304 1411 1 613 2126 103 6 0 chrX 3682449 3682760 -162967536 - L1_Mus1 LINE L1 0 6567 6255 1 613 4223 218 54 4 chrX 3682760 3683274 -162967022 - L1VL4 LINE L1 -4476 1410 869 1 613 5195 164 11 92 chrX 3683720 3684640 -162965656 - L1_Mur2 LINE L1 -2107 3779 2867 1 613 1910 201 48 2 chrX 3684640 3685059 -162965237 + BGLII_A LTR ERVK 1 438 -7 1 613 5195 164 11 92 chrX 3685059 3685780 -162964516 - L1_Mur2 LINE L1 -2107 2866 2149 1 613 1306 112 23 19 chrX 3685765 3686021 -162964275 - L1_Mur2 LINE L1 -4137 1740 1484 1 613 1895 195 38 0 chrX 3686024 3686449 -162963847 - L1_Mur2 LINE L1 -6272 814 383 1 613 2851 234 30 58 chrX 3686475 3686683 -162963613 + RMER6D LTR ERVK 16 230 -490 1 613 2329 66 122 11 chrX 3686683 3687034 -162963262 + RLTR10 LTR ERVK 1 390 0 1 613 2851 234 30 58 chrX 3687034 3687120 -162963176 + RMER6D LTR ERVK 231 314 -406 1 613 1884 137 92 3 chrX 3687120 3687458 -162962838 - RLTR9A LTR ERVK 0 368 1 1 613 2851 234 30 58 chrX 3687458 3687518 -162962778 + RMER6D LTR ERVK 315 367 -353 1 613 180 0 0 0 chrX 3687518 3687538 -162962758 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1 613 2851 234 30 58 chrX 3687538 3687902 -162962394 + RMER6D LTR ERVK 368 716 -4 1 613 328 359 65 64 chrX 3688195 3688783 -162961513 - L2a LINE L2 -40 3386 2796 1 613 23 33 0 0 chrX 3688827 3688857 -162961439 + AT_rich Low_complexity Low_complexity 1 30 0 1 613 1705 142 101 39 chrX 3689559 3689897 -162960399 - ORR1B2 LTR MaLR -8 359 1 1 613 582 227 35 0 chrX 3690687 3690828 -162959468 + B1_Mur1 SINE Alu 2 147 -2 1 613 3528 130 69 15 chrX 3690918 3691037 -162959259 - Lx LINE L1 0 6654 6536 1 613 204 40 0 0 chrX 3691037 3691062 -162959234 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 1 613 3528 130 69 15 chrX 3691062 3691552 -162958744 - Lx LINE L1 -119 6535 6014 1 613 1790 188 0 9 chrX 3691552 3691875 -162958421 - ORR1A3 LTR MaLR -6 320 1 1 613 9696 156 62 15 chrX 3691875 3693749 -162956547 - ORR1A3-int LTR MaLR 0 1963 1 1 613 2033 130 29 44 chrX 3693751 3694146 -162956150 - MT2B2 LTR ERVL -2 582 155 1 613 310 336 68 27 chrX 3694147 3694294 -162956002 - RMER15 LTR ERVL -1 574 422 1 613 1976 159 13 0 chrX 3694679 3694993 -162955303 - ORR1A3 LTR MaLR -8 318 1 1 613 530 302 26 68 chrX 3695061 3695253 -162955043 - MTE2b LTR MaLR -15 364 181 1 613 1520 231 87 12 chrX 3695256 3695602 -162954694 + ORR1D1 LTR MaLR 3 374 0 1 613 696 277 28 11 chrX 3695602 3695779 -162954517 - MTE2b LTR MaLR -195 184 5 1 613 478 328 66 59 chrX 3695909 3696165 -162954131 + MER106B DNA MER1_type 1 258 -801 1 613 245 347 16 41 chrX 3696374 3696497 -162953799 + MER106B DNA MER1_type 266 385 -674 1 613 425 259 144 63 chrX 3696513 3696896 -162953400 + MER106B DNA MER1_type 445 858 -201 1 613 1049 109 0 0 chrX 3697348 3697495 -162952801 - B1_Mus1 SINE Alu -1 147 1 1 613 384 77 0 0 chrX 3697571 3697623 -162952673 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 613 698 332 68 0 chrX 3697690 3697895 -162952401 - B4A SINE B4 -73 219 1 1 613 357 288 84 18 chrX 3697988 3698154 -162952142 - CYRA11_Mm Unknown Y-chromosome -225 392 216 1 613 812 178 114 6 chrX 3698008 3698183 -162952113 + URR1A DNA MER1_type 33 226 0 1 613 471 218 59 27 chrX 3698253 3698374 -162951922 + MTD LTR MaLR 282 405 -14 1 613 569 188 27 0 chrX 3698430 3698542 -162951754 + ORR1C2 LTR MaLR 1 115 -263 1 613 2068 93 64 72 chrX 3698546 3698905 -162951391 - RLTR10B2 LTR ERVK -9 356 1 1 613 1612 120 75 0 chrX 3698906 3699172 -162951124 + ORR1C2 LTR MaLR 95 380 -4 1 613 3013 122 12 37 chrX 3700093 3700580 -162949716 + MT2C_Mm LTR ERVL 1 475 0 1 613 204 122 0 0 chrX 3700971 3701012 -162949284 + (A)n Simple_repeat Simple_repeat 1 41 0 1 613 591 251 48 55 chrX 3701016 3701435 -162948861 + L1_Mur3 LINE L1 1012 1429 -4451 1 613 546 154 131 0 chrX 3701448 3701578 -162948718 + Lx5 LINE L1 6904 7050 0 1 613 216 0 0 0 chrX 3701646 3701670 -162948626 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 613 5240 109 14 53 chrX 3701671 3702583 -162947713 + RLTR13A3 LTR ERVK 1 978 0 1 613 976 137 7 0 chrX 3702613 3702759 -162947537 - B1_Mus1 SINE Alu -1 147 1 1 613 1968 228 28 46 chrX 3702761 3703474 -162946822 + L1_Mur3 LINE L1 1459 2158 -3722 1 613 6765 101 11 3 chrX 3703480 3704507 -162945789 + L1_Mus3 LINE L1 5604 6638 0 1 613 447 135 9 28 chrX 3704525 3704632 -162945664 + GA-rich Low_complexity Low_complexity 4 108 0 1 613 2514 237 52 67 chrX 3704633 3704787 -162945509 + L1_Mur3 LINE L1 3047 3187 -2693 1 613 997 137 21 52 chrX 3704787 3704979 -162945317 + B2_Mm2 SINE B2 2 187 -8 1 613 2514 237 52 67 chrX 3704979 3705393 -162944903 + L1_Mur3 LINE L1 3188 3620 -2260 1 613 6309 126 19 15 chrX 3705393 3706412 -162943884 - RLTR13D5 LTR ERVK 0 1023 1 1 613 2514 237 52 67 chrX 3706412 3706690 -162943606 + L1_Mur3 LINE L1 3621 3889 -1991 1 613 893 180 0 0 chrX 3706690 3706840 -162943456 - B1_Mur4 SINE Alu 0 150 1 1 613 2514 237 52 67 chrX 3706840 3707034 -162943262 + L1_Mur3 LINE L1 3890 4073 -1807 1 613 693 189 0 15 chrX 3707038 3707172 -162943124 + MT2B LTR ERVL 1 132 -469 1 613 762 122 0 0 chrX 3707227 3707342 -162942954 + ORR1A2 LTR MaLR 213 327 0 1 613 2394 79 0 0 chrX 3707704 3708044 -162942252 - L1_Mm LINE L1 -1354 4529 4190 1 613 5389 119 20 5 chrX 3708062 3708901 -162941395 + L1_Mus3 LINE L1 5787 6638 0 2 613 520 263 148 10 chrX 3708923 3709234 -162941062 + L1MD2 LINE L1 5638 5991 -368 2 613 23 33 0 0 chrX 3709492 3709522 -162940774 + AT_rich Low_complexity Low_complexity 1 30 0 2 613 35777 34 4 1 chrX 3711001 3716260 -162934036 - L1Md_T LINE L1 -2 6580 1301 2 613 1437 178 10 0 chrX 3716257 3716555 -162933741 - L1Md_F LINE L1 -6053 466 166 2 613 447 19 0 0 chrX 3717262 3717314 -162932982 + (TC)n Simple_repeat Simple_repeat 2 53 0 2 613 372 97 0 0 chrX 3717314 3717375 -162932921 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 613 766 295 44 52 chrX 3717636 3717981 -162932315 - MTEa LTR MaLR 0 379 13 2 613 21 0 0 0 chrX 3718021 3718042 -162932254 + AT_rich Low_complexity Low_complexity 1 21 0 2 613 935 163 0 0 chrX 3718042 3718183 -162932113 + B1_Mur4 SINE Alu 1 141 -9 2 613 1015 92 13 0 chrX 3718771 3718924 -162931372 - L1_Mus1 LINE L1 -737 5146 4992 2 613 4791 75 5 26 chrX 3718921 3719728 -162930568 + L1_Mus1 LINE L1 5154 5932 -635 2 613 4227 134 8 56 chrX 3719728 3720530 -162929766 + RMER17A LTR ERVK 1 749 -2 2 613 4798 71 11 5 chrX 3720530 3721169 -162929127 + L1_Mus1 LINE L1 5925 6567 0 2 613 189 0 0 0 chrX 3721198 3721219 -162929077 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2 613 603 205 160 28 chrX 3721675 3721892 -162928404 - Lx4B LINE L1 -4 7054 6788 2 613 180 0 0 0 chrX 3721893 3721913 -162928383 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 2 613 4622 161 8 3 chrX 3722004 3722879 -162927417 + L1_Mur2 LINE L1 3947 4825 -1052 2 613 4668 104 39 10 chrX 3722873 3723648 -162926648 - L1_Mur2 LINE L1 -254 5623 4827 2 613 269 161 18 0 chrX 3724155 3724211 -162926085 - MERVL_2A-int LTR ERVL -3496 2265 2209 2 613 2019 206 77 2 chrX 3724248 3724690 -162925606 + MERVL_2A-int LTR ERVL 3130 3604 -2157 2 613 28295 100 30 16 chrX 3724690 3727202 -162923094 + L1Md_F2 LINE L1 951 3476 -2407 2 613 324 48 0 0 chrX 3727202 3727244 -162923052 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 2 613 28295 100 34 16 chrX 3727244 3728009 -162922287 + L1Md_F2 LINE L1 3477 4350 -1533 2 613 3329 26 15 0 chrX 3728009 3728399 -162921897 - MTA_Mm LTR MaLR 0 396 1 2 613 28295 101 35 13 chrX 3728399 3730389 -162919907 + L1Md_F2 LINE L1 4351 6320 -262 2 613 674 144 33 46 chrX 3730401 3730554 -162919742 + L1Md_F2 LINE L1 6430 6580 -4 2 613 523 280 66 123 chrX 3730754 3731231 -162919065 + L1VL1 LINE L1 27 395 -6027 2 613 483 232 50 14 chrX 3731237 3731415 -162918881 + L1Md_T LINE L1 527 820 -5799 2 613 24539 63 163 1 chrX 3731418 3735565 -162914731 + L1Md_T LINE L1 773 5589 -297 2 613 8313 39 0 0 chrX 3735565 3736558 -162913738 + L1Md_T LINE L1 5590 6582 -3 2 613 317 0 0 0 chrX 3736558 3736602 -162913694 + L1Md_T LINE L1 6537 6580 -2 2 613 204 67 0 0 chrX 3736605 3736635 -162913661 + (A)n Simple_repeat Simple_repeat 1 30 0 2 613 21729 125 13 7 chrX 3736635 3741178 -162909118 + L1_Mus1 LINE L1 2001 6654 0 2 613 6554 113 12 2 chrX 3741184 3742641 -162907655 + L1_Mus2 LINE L1 5092 6565 -1 2 613 840 188 113 7 chrX 3742659 3742943 -162907353 + L1_Mur3 LINE L1 3073 3386 -2494 2 613 5128 191 40 47 chrX 3742949 3744278 -162906018 + L1_Mur3 LINE L1 4418 5736 -144 2 613 597 346 70 17 chrX 3745457 3745939 -162904357 - Lx8 LINE L1 -236 7237 6730 2 613 1261 303 81 21 chrX 3745954 3746523 -162903773 - Lx8 LINE L1 -800 6673 6071 2 613 724 282 6 44 chrX 3746871 3747230 -162903066 + RMER19A LTR ERVK 1 259 -478 2 613 468 0 0 0 chrX 3747438 3747490 -162902806 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 613 349 290 0 61 chrX 3747842 3748007 -162902289 + GA-rich Low_complexity Low_complexity 4 158 0 2 613 864 294 77 35 chrX 3750474 3750812 -162899484 - MTE2a LTR MaLR 0 379 28 2 613 483 284 60 7 chrX 3750814 3750963 -162899333 - MTE2a-int LTR MaLR 0 1580 1424 2 613 723 180 29 23 chrX 3750964 3751135 -162899161 - L1_Mur3 LINE L1 -1120 4760 4589 2 613 29 0 0 0 chrX 3753403 3753432 -162896864 + AT_rich Low_complexity Low_complexity 1 29 0 2 613 13208 137 9 8 chrX 3753467 3756563 -162893733 - L1_Mus3 LINE L1 -6 6632 3531 2 613 909 104 0 7 chrX 3756557 3756702 -162893594 - L1_Mus3 LINE L1 -3499 2384 2241 2 613 649 303 25 21 chrX 3757178 3757461 -162892835 + RLTR15 LTR ERVK 3 286 -73 2 613 1615 239 40 0 chrX 3757522 3757849 -162892447 + ORR1B1 LTR MaLR 14 353 -41 2 613 464 186 0 183 chrX 3757849 3758013 -162892283 + B1_Mus2 SINE Alu 1 134 -13 2 613 231 197 14 27 chrX 3758020 3758093 -162892203 + (CAGAGA)n Simple_repeat Simple_repeat 4 75 0 2 613 549 30 0 0 chrX 3758093 3758160 -162892136 + (TC)n Simple_repeat Simple_repeat 2 68 0 2 613 333 0 0 0 chrX 3758162 3758199 -162892097 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 613 486 83 0 0 chrX 3758768 3758840 -162891456 + (GGAA)n Simple_repeat Simple_repeat 3 74 0 2 613 259 228 200 38 chrX 3758932 3759037 -162891259 + RLTR6_Mm LTR ERV1 1 122 -532 2 613 1921 135 249 32 chrX 3759039 3759505 -162890791 + RLTR6_Mm LTR ERV1 37 603 -51 2 613 30796 33 26 0 chrX 3759506 3763697 -162886599 + RLTR6-int LTR ERV1 1 4414 -3364 2 613 6829 38 1 0 chrX 3763699 3764544 -162885752 + RLTR6-int LTR ERV1 6933 7778 0 2 613 259 228 200 38 chrX 3764544 3764649 -162885647 + RLTR6_Mm LTR ERV1 1 122 -532 2 613 1915 133 254 29 chrX 3764651 3765100 -162885196 + RLTR6_Mm LTR ERV1 37 586 -68 2 613 478 266 100 7 chrX 3765098 3765238 -162885058 + ORR1D1 LTR MaLR 205 357 -17 2 613 329 74 164 18 chrX 3765507 3765562 -162884734 + RMER10B LTR ERVL 1 63 -335 2 613 289 204 91 64 chrX 3765785 3765895 -162884401 + RMER17C-int LTR ERVK 2982 3094 -144 2 613 1363 161 75 117 chrX 3765961 3766389 -162883907 - RMER17C LTR ERVK 0 410 1 2 613 1444 180 182 6 chrX 3766404 3766739 -162883557 + RMER10B LTR ERVL 5 398 0 2 613 296 311 48 37 chrX 3766744 3766931 -162883365 - HERVL40-int LTR ERVL -2041 3489 3301 2 613 998 175 11 177 chrX 3767004 3767275 -162883021 - URR1A DNA MER1_type 0 226 1 2 613 29 0 0 0 chrX 3768259 3768288 -162882008 + AT_rich Low_complexity Low_complexity 1 29 0 2 613 788 199 20 0 chrX 3768528 3768674 -162881622 - B1_Mur4 SINE Alu -1 149 1 2 613 401 78 130 0 chrX 3768950 3769027 -162881269 + ORR1A2 LTR MaLR 1 87 -240 2 613 1820 116 250 0 chrX 3769029 3769357 -162880939 - ORR1A2-int LTR MaLR -535 1428 1019 2 613 260 342 51 0 chrX 3769362 3769479 -162880817 + ETnERV2-int LTR ERVK 7074 7196 -210 2 613 3049 190 35 30 chrX 3769752 3770330 -162879966 - ORR1A2-int LTR MaLR -936 1027 394 2 613 2570 66 6 190 chrX 3770330 3770626 -162879670 - MTB LTR MaLR 0 400 183 2 613 1082 89 0 0 chrX 3770626 3770772 -162879524 - B1_Mm SINE Alu 0 147 2 2 613 2570 66 6 190 chrX 3770772 3770964 -162879332 - MTB LTR MaLR -218 182 2 2 613 3049 176 18 20 chrX 3770964 3771352 -162878944 - ORR1A2-int LTR MaLR -1395 397 1 2 613 2092 138 25 0 chrX 3771352 3771671 -162878625 - ORR1A2 LTR MaLR 0 327 1 2 613 1683 131 11 0 chrX 3771671 3771945 -162878351 + ORR1A2-int LTR MaLR 1686 1962 -1 2 613 1860 163 3 58 chrX 3771946 3772292 -162878004 + ORR1A2 LTR MaLR 1 327 0 2 613 350 388 33 49 chrX 3772510 3773118 -162877178 + L2a LINE L2 2791 3386 -40 2 613 2833 219 69 35 chrX 3773412 3773748 -162876548 - RMER6D LTR ERVK 0 720 366 2 613 321 68 0 0 chrX 3773748 3773792 -162876504 + (CCA)n Simple_repeat Simple_repeat 3 46 0 2 613 2833 219 69 35 chrX 3773792 3773849 -162876447 - RMER6D LTR ERVK -355 365 315 2 613 1963 145 69 6 chrX 3773849 3774195 -162876101 + RLTR9A LTR ERVK 1 368 0 2 613 2833 219 69 35 chrX 3774195 3774482 -162875814 - RMER6D LTR ERVK -406 314 16 2 613 237 163 0 0 chrX 3774508 3774551 -162875745 + Lx4A LINE L1 525 567 -6519 2 613 345 45 0 0 chrX 3774568 3774612 -162875684 + RLTR1 LTR ERV1 581 624 0 2 613 3697 168 152 0 chrX 3774612 3775424 -162874872 + L1_Mur2 LINE L1 410 1344 -5742 2 613 1590 120 11 4 chrX 3775436 3775711 -162874585 + L1_Mur2 LINE L1 1470 1746 -4131 2 613 8487 131 30 18 chrX 3775690 3776405 -162873891 + L1_Mur2 LINE L1 2149 2850 -3027 2 613 1977 184 47 5 chrX 3776405 3776832 -162873464 - BGLII_A LTR ERVK 0 445 1 2 613 8487 131 30 18 chrX 3776832 3777719 -162872577 + L1_Mur2 LINE L1 2851 3769 -2108 2 613 10916 211 77 40 chrX 3778157 3778567 -162871729 + Lx4A LINE L1 859 1414 -4463 2 613 2115 127 7 0 chrX 3778567 3778874 -162871422 + L1_Mus1 LINE L1 6259 6567 0 2 613 10916 187 171 143 chrX 3778874 3779732 -162870564 + Lx4A LINE L1 1415 2285 -3592 2 613 1689 279 75 60 chrX 3779732 3780281 -162870015 + RLTR26 LTR ERVK 1 557 -85 2 613 10916 187 171 143 chrX 3780281 3780434 -162869862 + Lx4A LINE L1 2286 2442 -3435 2 613 3144 79 5 2 chrX 3780434 3780829 -162869467 + MTA_Mm LTR MaLR 1 396 0 2 613 10916 187 171 143 chrX 3780829 3782618 -162867678 + Lx4A LINE L1 2443 4251 -1626 2 613 1256 138 0 5 chrX 3782618 3782807 -162867489 + B2_Mm2 SINE B2 1 188 -7 2 613 10916 185 159 133 chrX 3782807 3783674 -162866622 + Lx4A LINE L1 4252 5875 -1183 2 613 2708 210 31 14 chrX 3783667 3784223 -162866073 + Lx4A LINE L1 6493 7057 -1 2 613 26 0 0 0 chrX 3784223 3784249 -162866047 + AT_rich Low_complexity Low_complexity 1 26 0 2 613 3939 215 45 15 chrX 3784876 3785726 -162864570 - RMER19B LTR ERVK -27 875 1 2 613 3052 92 9 16 chrX 3788840 3789270 -162861026 - L1Md_F2 LINE L1 0 6582 6156 2 613 1050 117 0 20 chrX 3789515 3789663 -162860633 + B1_Mus2 SINE Alu 1 145 -2 2 613 243 0 0 0 chrX 3789674 3789701 -162860595 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 613 1067 210 152 67 chrX 3789787 3790050 -162860246 + ORR1B2 LTR MaLR 1 290 -77 2 613 2486 119 16 69 chrX 3790050 3790483 -162859813 - MT2B LTR ERVL 0 601 192 2 613 229 221 159 14 chrX 3790427 3790496 -162859800 - PB1 SINE Alu -28 99 21 2 613 1148 90 7 7 chrX 3790515 3790661 -162859635 - B1_Mus2 SINE Alu 0 147 2 2 613 302 300 8 106 chrX 3791131 3791254 -162859042 + RSINE1 SINE B4 55 165 0 2 613 429 219 31 20 chrX 3791283 3791381 -162858915 - RLTR23 LTR ERV1 0 430 332 2 613 313 335 38 31 chrX 3791763 3791923 -162858373 - Lx9 LINE L1 -218 7426 7266 2 613 1139 197 98 0 chrX 3791971 3792276 -162858020 - Lx9 LINE L1 -1 7643 7309 2 613 2480 151 56 12 chrX 3792277 3792706 -162857590 + RLTR11B LTR ERVK 3 450 -3 2 613 482 151 22 55 chrX 3792708 3792799 -162857497 - Lx9 LINE L1 -427 7217 7130 2 613 1191 166 28 28 chrX 3792798 3793009 -162857287 + Lx9 LINE L1 6810 7020 -624 2 613 742 156 78 0 chrX 3793050 3793178 -162857118 + B1_Mur2 SINE Alu 12 149 0 2 613 624 186 16 41 chrX 3793374 3793497 -162856799 - PB1D9 SINE Alu 0 120 1 2 613 329 62 21 0 chrX 3793577 3793625 -162856671 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 2 613 699 126 23 8 chrX 3793625 3793753 -162856543 - Lx LINE L1 -19 7039 6910 2 613 872 99 14 0 chrX 3793843 3793985 -162856311 - Lx LINE L1 0 6654 6511 2 613 1275 305 56 40 chrX 3794597 3794690 -162855606 - Lx7 LINE L1 -1384 6312 6209 2 613 1346 126 0 33 chrX 3794690 3794903 -162855393 + Lx2 LINE L1 6792 6997 0 2 613 1275 305 56 40 chrX 3794903 3794960 -162855336 - Lx7 LINE L1 -1488 6208 6160 2 613 3302 94 25 39 chrX 3794960 3795449 -162854847 - RLTR45 LTR ERVK 0 482 1 2 613 1275 305 56 40 chrX 3795449 3795901 -162854395 - Lx7 LINE L1 -1537 6159 5699 2 613 908 118 13 0 chrX 3795903 3796056 -162854240 + (TTTC)n Simple_repeat Simple_repeat 2 156 0 2 613 1101 75 45 0 chrX 3796058 3796191 -162854105 - B1_Mm SINE Alu -6 141 3 2 613 325 230 138 0 chrX 3796223 3796310 -162853986 - B1_Mur2 SINE Alu -2 147 49 2 613 907 306 43 119 chrX 3796315 3796969 -162853327 + RLTR18 LTR ERVK 3 606 -10 2 613 262 281 0 15 chrX 3796967 3797032 -162853264 - B1F2 SINE Alu -85 64 1 3 613 213 357 29 0 chrX 3796972 3797042 -162853254 - ID_B1 SINE B4 -83 141 70 3 613 630 326 16 16 chrX 3797046 3797289 -162853007 - Lx8 LINE L1 -507 6966 6724 3 613 1841 201 75 40 chrX 3797291 3797720 -162852576 + RLTR41 LTR ERV1 1 444 -2 3 613 1885 176 31 116 chrX 3797777 3798259 -162852037 + RMER10A LTR ERVL 2 442 0 3 613 230 279 73 0 chrX 3798259 3798327 -162851969 - Lx8 LINE L1 -807 6666 6594 3 613 1405 167 124 102 chrX 3798327 3798747 -162851549 - RMER16 LTR ERVK 0 533 105 3 613 1007 299 25 41 chrX 3798772 3799215 -162851081 - Lx8 LINE L1 -900 6573 6138 3 613 719 105 73 0 chrX 3799218 3799342 -162850954 - L1Md_F2 LINE L1 0 6582 6450 3 613 4607 143 10 25 chrX 3799343 3800288 -162850008 + L1Md_A LINE L1 498 1423 -4460 3 613 254 263 0 0 chrX 3800321 3800378 -162849918 + Lx9 LINE L1 7201 7257 -387 3 76 13154 95 1 15 chrX 3800380 3802235 -162848061 - L1_Mm LINE L1 -116 5767 3940 3 614 18939 97 3 17 chrX 3802241 3805081 -162845215 + L1_Mm LINE L1 1147 3946 -1937 3 614 1097 266 28 42 chrX 3805083 3805205 -162845091 - ORR1D2-int LTR MaLR -749 621 472 3 614 2210 148 67 6 chrX 3805205 3805551 -162844745 - ORR1B2 LTR MaLR 0 367 1 3 614 1347 272 43 34 chrX 3805551 3805768 -162844528 - ORR1D2-int LTR MaLR -1038 471 230 3 614 593 201 155 191 chrX 3805768 3806193 -162844103 + RMER17C LTR ERVK 1 410 0 3 614 1347 269 35 35 chrX 3806193 3806430 -162843866 - ORR1D2-int LTR MaLR -1138 232 1 3 614 1329 263 55 30 chrX 3806430 3806791 -162843505 - ORR1D2 LTR MaLR 0 370 1 3 614 23 33 0 0 chrX 3806880 3806910 -162843386 + AT_rich Low_complexity Low_complexity 1 30 0 3 614 3165 279 86 41 chrX 3806910 3807239 -162843057 - Lx8 LINE L1 -2 7471 7123 3 614 837 71 0 0 chrX 3807239 3807352 -162842944 + (TTTC)n Simple_repeat Simple_repeat 3 115 0 3 614 3165 279 86 41 chrX 3807352 3807376 -162842920 - Lx8 LINE L1 -351 7122 7119 3 614 1193 83 0 0 chrX 3807376 3807521 -162842775 - B1_Mus2 SINE Alu -2 145 1 3 614 3165 279 86 41 chrX 3807521 3808072 -162842224 - Lx8 LINE L1 -355 7118 6511 3 614 519 45 0 0 chrX 3808072 3808138 -162842158 + (CA)n Simple_repeat Simple_repeat 1 66 0 3 614 3165 279 86 41 chrX 3808138 3808475 -162841821 - Lx8 LINE L1 -963 6510 6173 3 614 271 192 0 25 chrX 3808475 3808555 -162841741 + (TATATG)n Simple_repeat Simple_repeat 2 79 0 3 614 622 251 185 45 chrX 3808574 3808953 -162841343 - L1M2 LINE L1 -1328 4815 4384 3 614 13883 103 64 12 chrX 3809017 3812447 -162837849 - MuRRS4-int LTR ERV1 -1274 3789 180 3 614 2630 143 7 17 chrX 3812537 3812950 -162837346 - RLTR9E LTR ERVK 0 409 1 3 614 426 143 0 14 chrX 3812950 3813021 -162837275 - ETnERV2-int LTR ERVK -1 7405 7336 3 614 3320 131 5 61 chrX 3813237 3813959 -162836337 - ETnERV2-int LTR ERVK -1185 6221 5776 3 614 1043 110 75 0 chrX 3813959 3813980 -162836316 - B2_Mm1t SINE B2 0 193 163 3 614 193 0 29 59 chrX 3813980 3814014 -162836282 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 3 614 1043 110 75 0 chrX 3814014 3814165 -162836131 - B2_Mm1t SINE B2 -31 162 10 3 614 18412 118 26 4 chrX 3814173 3816005 -162834291 - ETnERV2-int LTR ERVK -1627 5779 3934 3 614 369 62 0 0 chrX 3816005 3816053 -162834243 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 614 18412 118 26 4 chrX 3816053 3816887 -162833409 - ETnERV2-int LTR ERVK -3473 3933 3056 3 614 551 271 0 61 chrX 3816887 3817052 -162833244 - ETnERV2-int LTR ERVK -4798 2608 2454 3 614 650 165 26 9 chrX 3817069 3817185 -162833111 - RMER16-int LTR ERVK -4200 1206 1089 3 614 270 111 0 0 chrX 3817260 3817305 -162832991 - RMER16-int LTR ERVK -5218 188 144 3 614 331 100 0 20 chrX 3817755 3817806 -162832490 - ETnERV2-int LTR ERVK -5104 2140 2091 3 614 728 201 19 76 chrX 3817861 3818121 -162832175 - MMETn-int LTR ERVK -2997 317 10 3 614 2445 152 17 22 chrX 3818130 3818541 -162831755 - RLTR9E LTR ERVK 0 409 1 3 614 269 209 32 113 chrX 3818544 3818668 -162831628 - MMVL30-int LTR ERV1 -3584 114 1 3 614 1718 176 39 34 chrX 3818668 3819050 -162831246 - LTRIS4 LTR ERV1 0 507 124 3 614 192 40 0 0 chrX 3819353 3819378 -162830918 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 3 614 3122 107 75 2 chrX 3819662 3820158 -162830138 + RLTR47_MM LTR ERV1 1 532 0 3 614 1335 230 56 6 chrX 3820158 3820488 -162829808 + ORR1B1-int LTR MaLR 325 728 -852 3 614 931 243 58 10 chrX 3820492 3820700 -162829596 - RLTR41 LTR ERV1 0 446 229 3 614 18755 166 27 22 chrX 3821160 3822867 -162827429 + L1_Mus3 LINE L1 361 2070 -3813 3 614 207 0 0 0 chrX 3822867 3822890 -162827406 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 614 18755 152 22 20 chrX 3822890 3823090 -162827206 + L1_Mus3 LINE L1 2071 2277 -3606 3 614 2731 87 6 3 chrX 3823090 3823435 -162826861 - ORR1A1 LTR MaLR 0 346 1 3 614 18755 152 22 20 chrX 3823435 3825764 -162824532 + L1_Mus3 LINE L1 2278 4613 -1270 3 614 6847 115 12 3 chrX 3825782 3826890 -162823406 + L1_Mus3 LINE L1 5515 6637 -1 3 614 195 149 29 43 chrX 3827504 3827574 -162822722 + (TA)n Simple_repeat Simple_repeat 1 69 0 3 614 254 176 0 42 chrX 3828415 3828486 -162821810 + (CCAA)n Simple_repeat Simple_repeat 2 69 0 3 614 4148 216 42 14 chrX 3831690 3832567 -162817729 + RMER19B LTR ERVK 1 902 0 3 614 2519 205 30 11 chrX 3833209 3833742 -162816554 - Lx4A LINE L1 -1 7057 6515 3 614 3717 234 136 74 chrX 3833750 3834562 -162815734 - L1_Mur2 LINE L1 -388 5792 4927 3 614 917 148 0 0 chrX 3834562 3834697 -162815599 + B1_Mus2 SINE Alu 5 139 -8 3 614 465 19 0 0 chrX 3834706 3834760 -162815536 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 3 614 3717 228 144 78 chrX 3834760 3834837 -162815459 - L1_Mur2 LINE L1 -951 4926 4833 3 614 1352 102 0 5 chrX 3834837 3835025 -162815271 - B2_Mm2 SINE B2 -8 187 1 3 614 3717 228 144 78 chrX 3835025 3836690 -162813606 - L1_Mur2 LINE L1 -1045 4832 3025 3 614 25848 144 25 44 chrX 3836686 3843352 -162806944 - L1Md_T LINE L1 -1 6581 220 3 614 363 112 34 0 chrX 3843583 3843672 -162806624 + (TA)n Simple_repeat Simple_repeat 1 92 0 3 614 874 104 34 27 chrX 3843672 3843820 -162806476 - L1Md_F2 LINE L1 -18 6564 6416 3 614 9102 108 11 10 chrX 3843820 3845656 -162804640 - L1Md_F2 LINE L1 -265 6317 4469 3 614 7679 42 0 0 chrX 3845649 3846729 -162803567 - L1Md_T LINE L1 0 6582 5503 3 614 612 26 0 0 chrX 3846729 3846805 -162803491 + LSU-rRNA_Hsa rRNA rRNA 2293 2368 -2667 3 614 18800 104 48 8 chrX 3846801 3846936 -162803360 - L1Md_F2 LINE L1 -1397 4486 4352 3 614 3327 28 15 0 chrX 3846936 3847326 -162802970 + MTA_Mm LTR MaLR 1 396 0 3 614 18800 104 48 8 chrX 3847326 3848090 -162802206 - L1Md_F2 LINE L1 -1532 4351 3492 3 614 306 0 0 0 chrX 3848090 3848124 -162802172 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 3 614 18800 103 41 8 chrX 3848124 3850634 -162799662 - L1Md_F2 LINE L1 -2392 3491 951 3 614 2015 209 77 2 chrX 3850634 3851076 -162799220 - MERVL_2A-int LTR ERVL -2157 3604 3130 3 614 254 179 18 0 chrX 3851113 3851169 -162799127 + MERVL_2A-int LTR ERVL 2209 2265 -3496 3 614 4655 104 39 12 chrX 3851677 3852453 -162797843 + L1_Mur2 LINE L1 4827 5623 -254 3 614 4641 159 8 3 chrX 3852447 3853322 -162796974 - L1_Mur2 LINE L1 -1052 4825 3947 3 614 180 0 0 0 chrX 3853412 3853432 -162796864 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 3 614 603 205 160 28 chrX 3853433 3853650 -162796646 + Lx4B LINE L1 6788 7054 -4 3 614 189 0 0 0 chrX 3854106 3854127 -162796169 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 3 614 4707 79 11 5 chrX 3854156 3854795 -162795501 - L1_Mus1 LINE L1 0 6567 5925 3 614 4245 134 8 56 chrX 3854795 3855597 -162794699 - RMER17A LTR ERVK -2 749 1 3 614 4815 74 5 26 chrX 3855597 3856404 -162793892 - L1_Mus1 LINE L1 -635 5932 5154 3 614 953 105 13 0 chrX 3856401 3856554 -162793742 + L1_Mus1 LINE L1 4992 5146 -737 3 614 957 156 0 0 chrX 3857143 3857284 -162793012 - B1_Mur4 SINE Alu -9 141 1 3 614 21 0 0 0 chrX 3857284 3857305 -162792991 + AT_rich Low_complexity Low_complexity 1 21 0 3 614 784 279 66 52 chrX 3857345 3857690 -162792606 + MTEa LTR MaLR 13 379 0 3 614 372 97 0 0 chrX 3857951 3858013 -162792283 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 614 411 21 0 0 chrX 3858013 3858060 -162792236 + (GA)n Simple_repeat Simple_repeat 2 49 0 3 614 1437 178 10 0 chrX 3858767 3859065 -162791231 + L1Md_F LINE L1 166 466 -6053 3 614 33412 34 3 1 chrX 3859062 3863340 -162786956 + L1Md_T LINE L1 1301 5586 -297 3 614 8036 40 16 2 chrX 3863341 3864321 -162785975 + L1Md_T LINE L1 5588 6581 -1 3 614 23 33 0 0 chrX 3865800 3865830 -162784466 + AT_rich Low_complexity Low_complexity 1 30 0 3 614 553 263 148 10 chrX 3866087 3866398 -162783898 - L1MD2 LINE L1 -368 5991 5638 3 614 5338 122 20 5 chrX 3866420 3867259 -162783037 - L1_Mus3 LINE L1 0 6638 5787 3 614 2406 77 0 0 chrX 3867277 3867617 -162782679 + L1_Mm LINE L1 4190 4529 -1354 3 614 762 122 0 0 chrX 3867979 3868094 -162782202 - ORR1A2 LTR MaLR 0 327 213 3 614 693 189 0 15 chrX 3868149 3868283 -162782013 - MT2B LTR ERVL -469 132 1 3 614 2574 236 46 68 chrX 3868287 3868481 -162781815 - L1_Mur3 LINE L1 -1807 4073 3890 3 614 893 180 0 0 chrX 3868481 3868631 -162781665 + B1_Mur4 SINE Alu 1 150 0 3 614 2574 236 46 68 chrX 3868631 3868911 -162781385 - L1_Mur3 LINE L1 -1991 3889 3621 3 614 6333 124 19 15 chrX 3868911 3869930 -162780366 + RLTR13D5 LTR ERVK 1 1023 0 3 614 2574 236 46 68 chrX 3869930 3870351 -162779945 - L1_Mur3 LINE L1 -2260 3620 3188 3 614 956 148 21 52 chrX 3870351 3870543 -162779753 - B2_Mm2 SINE B2 -8 187 2 3 614 2574 236 46 68 chrX 3870543 3870696 -162779600 - L1_Mur3 LINE L1 -2693 3187 3047 3 614 391 143 0 32 chrX 3870697 3870791 -162779505 + CT-rich Low_complexity Low_complexity 2 92 0 3 614 6782 99 11 3 chrX 3870814 3871841 -162778455 - L1_Mus3 LINE L1 0 6638 5604 3 614 1993 226 28 46 chrX 3871847 3872560 -162777736 - L1_Mur3 LINE L1 -3722 2158 1459 3 614 997 129 7 0 chrX 3872562 3872709 -162777587 + B1_Mus1 SINE Alu 1 148 0 3 614 5232 111 14 53 chrX 3872739 3873651 -162776645 - RLTR13A3 LTR ERVK 0 978 1 3 614 216 0 0 0 chrX 3873652 3873676 -162776620 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 614 537 143 135 0 chrX 3873744 3873870 -162776426 - Lx5 LINE L1 0 7050 6908 3 614 566 252 48 59 chrX 3873887 3874314 -162775982 - L1_Mur3 LINE L1 -4451 1429 1006 3 614 213 65 0 0 chrX 3874320 3874351 -162775945 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 614 3006 122 12 37 chrX 3874744 3875231 -162775065 - MT2C_Mm LTR ERVL 0 475 1 3 614 1598 124 75 0 chrX 3876152 3876418 -162773878 - ORR1C2 LTR MaLR -4 380 95 3 614 1695 81 183 78 chrX 3876419 3876741 -162773555 + RLTR10B2 LTR ERVK 1 356 -9 3 614 587 179 27 0 chrX 3876745 3876857 -162773439 - ORR1C2 LTR MaLR -263 115 1 3 614 471 218 59 27 chrX 3876913 3877034 -162773262 - MTD LTR MaLR -14 405 282 3 614 777 190 114 6 chrX 3877104 3877279 -162773017 - URR1A DNA MER1_type 0 226 33 3 614 340 294 84 18 chrX 3877133 3877299 -162772997 + CYRA11_Mm Unknown Y-chromosome 216 392 -225 3 614 687 337 68 0 chrX 3877392 3877597 -162772699 + B4A SINE B4 1 219 -73 3 614 420 71 0 0 chrX 3877664 3877720 -162772576 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 614 1025 116 0 0 chrX 3877796 3877943 -162772353 + B1_Mus1 SINE Alu 1 147 -1 3 614 418 262 144 63 chrX 3878396 3878779 -162771517 - MER106B DNA MER1_type -201 858 445 3 614 231 356 16 41 chrX 3878795 3878918 -162771378 - MER106B DNA MER1_type -674 385 266 3 614 468 332 66 59 chrX 3879127 3879383 -162770913 - MER106B DNA MER1_type -801 258 1 3 614 708 271 28 11 chrX 3879513 3879690 -162770606 + MTE2b LTR MaLR 5 184 -195 3 614 1531 228 87 12 chrX 3879690 3880036 -162770260 - ORR1D1 LTR MaLR 0 374 3 3 614 543 296 26 68 chrX 3880039 3880231 -162770065 + MTE2b LTR MaLR 181 364 -15 3 614 1870 173 19 0 chrX 3880299 3880611 -162769685 + ORR1A3 LTR MaLR 1 318 -8 3 614 310 336 68 27 chrX 3880996 3881143 -162769153 + RMER15 LTR ERVL 422 574 -1 3 614 2026 130 29 44 chrX 3881144 3881539 -162768757 + MT2B2 LTR ERVL 155 582 -2 3 614 9710 158 60 13 chrX 3881541 3883416 -162766880 + ORR1A3-int LTR MaLR 1 1963 0 3 614 1790 188 0 9 chrX 3883416 3883739 -162766557 + ORR1A3 LTR MaLR 1 320 -6 3 614 3496 131 69 15 chrX 3883739 3884229 -162766067 + Lx LINE L1 6012 6518 -136 3 614 204 40 0 0 chrX 3884229 3884254 -162766042 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 4 614 3496 131 69 15 chrX 3884254 3884373 -162765923 + Lx LINE L1 6519 6653 -1 3 614 582 227 35 0 chrX 3884463 3884604 -162765692 - B1_Mur1 SINE Alu -2 147 2 4 614 1716 142 101 39 chrX 3885393 3885731 -162764565 + ORR1B2 LTR MaLR 1 359 -8 4 614 23 33 0 0 chrX 3886433 3886463 -162763833 + AT_rich Low_complexity Low_complexity 1 30 0 4 614 328 359 65 64 chrX 3886507 3887095 -162763201 + L2a LINE L2 2796 3386 -40 4 614 2933 225 31 56 chrX 3887388 3887752 -162762544 - RMER6D LTR ERVK -4 716 363 4 614 198 0 0 0 chrX 3887752 3887774 -162762522 + (CCA)n Simple_repeat Simple_repeat 2 23 0 4 614 2933 225 31 56 chrX 3887774 3887832 -162762464 - RMER6D LTR ERVK -358 362 315 4 614 1897 133 92 3 chrX 3887832 3888170 -162762126 + RLTR9A LTR ERVK 1 368 0 4 614 2933 225 31 56 chrX 3888170 3888256 -162762040 - RMER6D LTR ERVK -406 314 231 4 614 2301 77 117 6 chrX 3888256 3888607 -162761689 - RLTR10 LTR ERVK 0 390 1 4 614 2933 225 31 56 chrX 3888607 3888815 -162761481 - RMER6D LTR ERVK -490 230 16 4 614 1922 193 36 0 chrX 3888841 3889267 -162761029 + L1_Mur2 LINE L1 383 814 -6272 4 614 1306 112 23 19 chrX 3889270 3889526 -162760770 + L1_Mur2 LINE L1 1484 1740 -4137 4 614 5219 173 9 127 chrX 3889521 3890232 -162760064 + L1_Mur2 LINE L1 2171 2867 -3013 4 614 1935 199 48 2 chrX 3890232 3890651 -162759645 - BGLII_A LTR ERVK -7 438 1 4 614 5219 173 9 127 chrX 3890651 3891571 -162758725 + L1_Mur2 LINE L1 2868 3771 -2109 4 614 4207 218 54 4 chrX 3892017 3892531 -162757765 + L1VL4 LINE L1 869 1410 -4476 4 614 2103 106 6 0 chrX 3892531 3892842 -162757454 + L1_Mus1 LINE L1 6255 6567 0 4 614 4207 191 65 8 chrX 3892842 3893683 -162756613 + L1VL4 LINE L1 1411 2304 -3582 4 614 1911 283 68 51 chrX 3893686 3894316 -162755980 + RLTR26 LTR ERVK 2 642 0 4 614 1350 137 15 12 chrX 3894323 3894582 -162755714 + L1_Mur1 LINE L1 2308 2567 -3319 4 614 29426 92 20 8 chrX 3894584 3899311 -162750985 + L1_Mus2 LINE L1 199 5038 -848 4 614 5670 102 6 0 chrX 3899311 3900109 -162750187 + L1_Mus1 LINE L1 5765 6567 0 4 614 29426 96 21 3 chrX 3900109 3901574 -162748722 + L1_Mus2 LINE L1 5039 6568 -1 4 614 815 191 113 7 chrX 3901592 3901876 -162748420 + L1_Mur3 LINE L1 3073 3386 -2494 4 614 5175 189 40 48 chrX 3901882 3903212 -162747084 + L1_Mur3 LINE L1 4418 5736 -144 4 614 447 321 21 5 chrX 3904679 3904873 -162745423 - Lx8 LINE L1 -547 6926 6730 4 614 1224 309 77 21 chrX 3904888 3905459 -162744837 - Lx8 LINE L1 -800 6673 6071 4 614 738 282 6 44 chrX 3905807 3906166 -162744130 + RMER19A LTR ERVK 1 259 -478 4 614 393 271 0 61 chrX 3906744 3906909 -162743387 + GA-rich Low_complexity Low_complexity 4 158 0 4 614 853 294 77 35 chrX 3909382 3909720 -162740576 - MTE2a LTR MaLR 0 379 28 4 614 483 284 60 7 chrX 3909722 3909871 -162740425 - MTE2a-int LTR MaLR 0 1580 1424 4 614 750 174 29 23 chrX 3909872 3910043 -162740253 - L1_Mur3 LINE L1 -1120 4760 4589 4 614 29 0 0 0 chrX 3912183 3912212 -162738084 + AT_rich Low_complexity Low_complexity 1 29 0 4 614 549 0 0 0 chrX 3912255 3912316 -162737980 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 614 13718 129 9 9 chrX 3912316 3915392 -162734904 - L1_Mus3 LINE L1 -30 6608 3531 4 614 874 125 0 7 chrX 3915386 3915531 -162734765 - L1_Mus3 LINE L1 -3499 2384 2241 4 614 631 307 25 21 chrX 3916008 3916291 -162734005 + RLTR15 LTR ERVK 3 286 -73 4 614 1643 229 40 0 chrX 3916352 3916679 -162733617 + ORR1B1 LTR MaLR 14 353 -41 4 614 457 194 0 183 chrX 3916679 3916843 -162733453 + B1_Mus2 SINE Alu 1 134 -13 4 614 226 211 13 26 chrX 3916850 3916928 -162733368 + (CAGAGA)n Simple_repeat Simple_repeat 4 80 0 4 614 255 31 0 0 chrX 3916928 3916960 -162733336 + (TC)n Simple_repeat Simple_repeat 2 33 0 4 614 402 21 0 0 chrX 3916962 3917009 -162733287 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 614 558 75 0 0 chrX 3917578 3917658 -162732638 + (GGAA)n Simple_repeat Simple_repeat 3 82 0 4 614 288 169 115 115 chrX 3918149 3918236 -162732060 + MTEa LTR MaLR 47 133 -226 4 614 380 263 0 0 chrX 3918310 3918386 -162731910 - RSINE1 SINE B4 -85 80 5 4 614 424 337 102 36 chrX 3918416 3918615 -162731681 + MTEa LTR MaLR 150 379 0 4 615 255 204 19 0 chrX 3969093 3969147 -162681149 - L1_Mur2 LINE L1 -6622 90 36 4 615 328 45 0 0 chrX 3969147 3969191 -162681105 - RLTR1 LTR ERV1 0 624 581 4 615 274 139 0 0 chrX 3969208 3969251 -162681045 - L1_Mur2 LINE L1 -6519 193 151 4 615 2617 216 69 35 chrX 3969277 3969564 -162680732 + RMER6D LTR ERVK 16 314 -406 4 615 1987 145 69 6 chrX 3969564 3969910 -162680386 - RLTR9A LTR ERVK 0 368 1 4 615 2617 216 69 35 chrX 3969910 3969967 -162680329 + RMER6D LTR ERVK 315 365 -355 4 615 300 91 0 0 chrX 3969967 3970011 -162680285 + (TGG)n Simple_repeat Simple_repeat 3 46 0 4 615 2617 216 69 35 chrX 3970011 3970347 -162679949 + RMER6D LTR ERVK 366 720 0 4 615 211 339 0 17 chrX 3970694 3970754 -162679542 - L2b LINE L2 -96 3279 3221 4 615 229 409 7 41 chrX 3970956 3971249 -162679047 - L2b LINE L2 -346 3073 2791 4 615 1950 153 3 58 chrX 3971467 3971813 -162678483 - ORR1A2 LTR MaLR 0 327 1 4 615 1586 131 11 0 chrX 3971813 3972088 -162678208 - ORR1A2-int LTR MaLR 0 1963 1686 4 615 2186 125 25 0 chrX 3972088 3972407 -162677889 + ORR1A2 LTR MaLR 1 327 0 4 615 2828 176 18 20 chrX 3972407 3972795 -162677501 + ORR1A2-int LTR MaLR 1 397 -1395 4 615 2854 68 7 92 chrX 3972795 3972987 -162677309 + MTB LTR MaLR 2 182 -218 4 615 1126 82 0 0 chrX 3972987 3973133 -162677163 + B1_Mm SINE Alu 2 147 0 4 615 2854 68 7 92 chrX 3973133 3973376 -162676920 + MTB LTR MaLR 183 400 0 4 615 2828 189 36 25 chrX 3973376 3973954 -162676342 + ORR1A2-int LTR MaLR 393 1027 -936 4 615 1725 110 250 0 chrX 3974349 3974677 -162675619 + ORR1A2-int LTR MaLR 1019 1428 -535 4 615 385 78 130 0 chrX 3974679 3974756 -162675540 - ORR1A2 LTR MaLR -240 87 1 4 615 710 216 13 20 chrX 3975032 3975183 -162675113 + B1_Mur4 SINE Alu 1 150 0 4 615 29 0 0 0 chrX 3975418 3975447 -162674849 + AT_rich Low_complexity Low_complexity 1 29 0 4 615 210 150 0 0 chrX 3976483 3976523 -162673773 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 615 869 152 23 6 chrX 3976524 3976696 -162673600 + URR1A DNA MER1_type 52 226 0 4 615 336 311 48 37 chrX 3976769 3976956 -162673340 + HERVL40-int LTR ERVL 3301 3489 -2041 4 615 1442 180 182 6 chrX 3976961 3977296 -162673000 - RMER10B LTR ERVL 0 398 5 4 615 1386 159 75 117 chrX 3977311 3977739 -162672557 + RMER17C LTR ERVK 1 410 0 4 615 325 212 83 66 chrX 3977805 3977926 -162672370 - RMER17C-int LTR ERVK -144 3094 2972 4 615 288 93 164 18 chrX 3978138 3978193 -162672103 - RMER10B LTR ERVL -335 63 1 4 615 442 234 114 21 chrX 3978462 3978602 -162671694 - ORR1D1 LTR MaLR -17 357 205 4 615 1733 147 254 29 chrX 3978600 3979049 -162671247 - RLTR6_Mm LTR ERV1 -68 586 37 4 615 268 194 209 0 chrX 3979089 3979156 -162671140 - RLTR6_Mm LTR ERV1 -573 81 1 4 615 7291 38 1 0 chrX 3979156 3980001 -162670295 - RLTR6-int LTR ERV1 0 7778 6933 4 615 33184 34 26 0 chrX 3979996 3984208 -162666088 - RLTR6-int LTR ERV1 -3357 4421 1 4 615 1789 119 275 49 chrX 3984208 3984659 -162665637 - RLTR6_Mm LTR ERV1 -65 589 37 4 615 268 194 209 0 chrX 3984699 3984766 -162665530 - RLTR6_Mm LTR ERV1 -573 81 1 4 615 441 90 0 0 chrX 3984855 3984922 -162665374 + (TTCC)n Simple_repeat Simple_repeat 3 69 0 4 615 351 0 0 0 chrX 3985491 3985530 -162664766 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 615 384 59 0 0 chrX 3985532 3985583 -162664713 + (GA)n Simple_repeat Simple_repeat 2 52 0 4 615 231 197 14 27 chrX 3985583 3985656 -162664640 + (TCTCTG)n Simple_repeat Simple_repeat 4 75 0 4 615 437 157 67 84 chrX 3985663 3985827 -162664469 - B1_Mur4 SINE Alu -13 137 1 4 615 1517 232 40 0 chrX 3985827 3986154 -162664142 - ORR1B1 LTR MaLR -41 353 14 4 615 504 304 25 16 chrX 3986254 3986498 -162663798 - RLTR15 LTR ERVK -111 248 3 4 615 972 158 10 13 chrX 3986938 3987131 -162663165 + L1_Mus3 LINE L1 2228 2422 -3724 4 615 14225 135 11 8 chrX 3987113 3990180 -162660116 + L1_Mus3 LINE L1 3531 6607 -31 4 615 189 0 0 0 chrX 3990180 3990201 -162660095 + (TA)n Simple_repeat Simple_repeat 1 21 0 4 615 29 0 0 0 chrX 3990244 3990273 -162660023 + AT_rich Low_complexity Low_complexity 1 29 0 4 615 800 180 29 23 chrX 3992540 3992711 -162657585 + L1_Mur3 LINE L1 4589 4760 -1120 4 615 433 291 60 7 chrX 3992712 3992861 -162657435 + MTE2a-int LTR MaLR 1424 1580 0 4 615 790 254 35 9 chrX 3992863 3993089 -162657207 + MTE2a LTR MaLR 28 259 -120 4 615 352 284 0 61 chrX 3995674 3995839 -162654457 + CT-rich Low_complexity Low_complexity 4 158 0 4 615 342 0 0 0 chrX 3996191 3996229 -162654067 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 615 672 279 6 44 chrX 3996437 3996796 -162653500 - RMER19A LTR ERVK -478 259 1 4 615 1464 302 77 21 chrX 3997144 3997715 -162652581 + Lx8 LINE L1 6071 6673 -800 4 615 696 346 70 19 chrX 3997730 3998213 -162652083 + Lx8 LINE L1 6730 7237 -236 4 615 3201 177 35 2 chrX 3999392 3999999 -162650297 - L1_Mur3 LINE L1 -144 5736 5110 4 615 2141 206 43 87 chrX 4000000 4000723 -162649573 - L1_Mur3 LINE L1 -772 5108 4418 1 615 790 195 113 7 chrX 4000729 4001013 -162649283 - L1_Mur3 LINE L1 -2494 3386 3073 1 615 6554 114 12 2 chrX 4001031 4002488 -162647808 - L1_Mus2 LINE L1 -1 6565 5092 2 615 21788 125 13 8 chrX 4002503 4007044 -162643252 - L1_Mus1 LINE L1 0 6570 2004 3 615 317 0 0 0 chrX 4007073 4007117 -162643179 - L1Md_T LINE L1 -2 6580 6537 4 615 25993 27 1 0 chrX 4007117 4011034 -162639262 - L1Md_T LINE L1 -2 6580 2661 5 615 4565 162 63 8 chrX 4011034 4012443 -162637853 - L1_Mus1 LINE L1 -1901 2016 527 3 615 545 274 66 123 chrX 4012449 4012926 -162637370 - L1VL1 LINE L1 -6027 395 27 6 615 642 151 33 46 chrX 4013126 4013279 -162637017 - L1Md_F2 LINE L1 -4 6580 6430 7 615 28335 101 35 8 chrX 4013291 4015251 -162635045 - L1Md_F2 LINE L1 -262 6320 4352 7 615 3315 28 15 0 chrX 4015251 4015641 -162634655 + MTA_Mm LTR MaLR 1 396 0 8 615 28335 101 34 10 chrX 4015641 4016409 -162633887 - L1Md_F2 LINE L1 -1532 4351 3489 7 615 318 26 0 0 chrX 4016409 4016448 -162633848 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 9 615 28335 100 29 10 chrX 4016448 4018956 -162631340 - L1Md_F2 LINE L1 -2395 3488 951 7 615 2045 204 77 2 chrX 4018956 4019398 -162630898 - MERVL_2A-int LTR ERVL -2157 3604 3130 1 615 269 161 18 0 chrX 4019435 4019491 -162630805 + MERVL_2A-int LTR ERVL 2209 2265 -3496 1 615 4695 100 39 13 chrX 4019998 4020775 -162629521 + L1_Mur2 LINE L1 4827 5623 -254 1 615 4641 159 8 3 chrX 4020769 4021644 -162628652 - L1_Mur2 LINE L1 -1052 4825 3947 1 615 180 0 0 0 chrX 4021734 4021754 -162628542 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 1 615 603 205 160 28 chrX 4021755 4021972 -162628324 + Lx4B LINE L1 6788 7054 -4 1 615 189 0 0 0 chrX 4022428 4022449 -162627847 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 615 4747 75 11 3 chrX 4022478 4023116 -162627180 - L1_Mus1 LINE L1 0 6567 5925 1 615 4204 137 8 56 chrX 4023116 4023918 -162626378 - RMER17A LTR ERVK -2 749 1 1 615 4801 74 5 26 chrX 4023918 4024725 -162625571 - L1_Mus1 LINE L1 -635 5932 5154 1 615 1039 97 0 0 chrX 4024722 4024877 -162625419 + L1_Mus1 LINE L1 4992 5146 -737 1 615 957 156 0 0 chrX 4025464 4025605 -162624691 - B1_Mur4 SINE Alu -9 141 1 2 615 21 0 0 0 chrX 4025605 4025626 -162624670 + AT_rich Low_complexity Low_complexity 1 21 0 2 615 784 279 66 52 chrX 4025666 4026011 -162624285 + MTEa LTR MaLR 13 379 0 2 615 390 94 0 0 chrX 4026272 4026336 -162623960 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 615 357 24 0 0 chrX 4026336 4026377 -162623919 + (GA)n Simple_repeat Simple_repeat 2 43 0 2 615 1377 182 14 0 chrX 4027090 4027387 -162622909 + L1Md_F LINE L1 166 466 -6053 2 615 33251 35 3 1 chrX 4027384 4031663 -162618633 + L1Md_T LINE L1 1301 5586 -297 2 615 8163 37 15 1 chrX 4031663 4032643 -162617653 + L1Md_T LINE L1 5587 6580 -2 2 615 23 33 0 0 chrX 4034122 4034152 -162616144 + AT_rich Low_complexity Low_complexity 1 30 0 2 615 537 266 148 10 chrX 4034409 4034720 -162615576 - L1MD2 LINE L1 -368 5991 5638 2 615 5390 120 20 5 chrX 4034742 4035581 -162614715 - L1_Mus3 LINE L1 0 6638 5787 2 615 2358 85 0 0 chrX 4035599 4035939 -162614357 + L1_Mm LINE L1 4190 4529 -1354 3 615 762 122 0 0 chrX 4036301 4036416 -162613880 - ORR1A2 LTR MaLR 0 327 213 3 615 631 212 0 15 chrX 4036471 4036605 -162613691 - MT2B LTR ERVL -469 132 1 3 615 2490 237 44 82 chrX 4036609 4036803 -162613493 - L1_Mur3 LINE L1 -1807 4073 3890 3 615 893 180 0 0 chrX 4036803 4036953 -162613343 + B1_Mur4 SINE Alu 1 150 0 3 615 2490 237 44 82 chrX 4036953 4037233 -162613063 - L1_Mur3 LINE L1 -1991 3889 3621 3 615 6341 124 19 15 chrX 4037233 4038252 -162612044 + RLTR13D5 LTR ERVK 1 1023 0 3 615 2490 237 44 82 chrX 4038252 4038688 -162611608 - L1_Mur3 LINE L1 -2260 3620 3184 3 615 968 145 23 28 chrX 4038688 4038865 -162611431 - B2_Mm2 SINE B2 -18 177 2 3 615 2490 237 44 82 chrX 4038865 4039019 -162611277 - L1_Mur3 LINE L1 -2697 3183 3047 3 615 433 143 0 30 chrX 4039020 4039121 -162611175 + CT-rich Low_complexity Low_complexity 3 100 0 3 615 6751 101 11 3 chrX 4039141 4040168 -162610128 - L1_Mus3 LINE L1 0 6638 5604 3 615 1994 226 28 46 chrX 4040174 4040887 -162609409 - L1_Mur3 LINE L1 -3722 2158 1459 3 615 983 136 7 0 chrX 4040889 4041036 -162609260 + B1_Mus1 SINE Alu 1 148 0 3 615 5251 108 13 54 chrX 4041069 4041965 -162608331 - RLTR13A3 LTR ERVK 0 978 119 4 615 216 0 0 0 chrX 4041982 4042006 -162608290 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4 615 517 161 131 0 chrX 4042074 4042204 -162608092 - Lx5 LINE L1 0 7050 6904 4 615 559 253 48 59 chrX 4042217 4042644 -162607652 - L1_Mur3 LINE L1 -4451 1429 1006 3 615 209 108 27 0 chrX 4042644 4042681 -162607615 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 4 615 3018 122 12 37 chrX 4043072 4043559 -162606737 - MT2C_Mm LTR ERVL 0 475 1 4 615 1569 128 75 0 chrX 4044480 4044746 -162605550 - ORR1C2 LTR MaLR -4 380 95 4 615 2065 93 64 72 chrX 4044747 4045106 -162605190 + RLTR10B2 LTR ERVK 1 356 -9 4 615 587 179 27 0 chrX 4045110 4045222 -162605074 - ORR1C2 LTR MaLR -263 115 1 4 615 460 224 65 20 chrX 4045278 4045399 -162604897 - MTD LTR MaLR -14 405 287 4 615 801 184 114 6 chrX 4045469 4045644 -162604652 - URR1A DNA MER1_type 0 226 33 4 615 350 290 85 18 chrX 4045498 4045663 -162604633 + CYRA11_Mm Unknown Y-chromosome 216 391 -226 4 615 698 332 68 0 chrX 4045757 4045962 -162604334 + B4A SINE B4 1 219 -73 5 615 384 77 0 0 chrX 4046029 4046081 -162604215 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 615 1049 109 0 0 chrX 4046158 4046305 -162603991 + B1_Mus1 SINE Alu 1 147 -1 5 615 425 259 144 63 chrX 4046758 4047141 -162603155 - MER106B DNA MER1_type -201 858 445 5 615 231 356 16 41 chrX 4047157 4047280 -162603016 - MER106B DNA MER1_type -674 385 266 5 615 503 324 66 59 chrX 4047489 4047745 -162602551 - MER106B DNA MER1_type -801 258 1 5 615 708 271 28 11 chrX 4047875 4048052 -162602244 + MTE2b LTR MaLR 5 184 -195 5 615 1520 231 87 12 chrX 4048052 4048398 -162601898 - ORR1D1 LTR MaLR 0 374 3 5 615 560 291 26 68 chrX 4048401 4048593 -162601703 + MTE2b LTR MaLR 181 364 -15 5 615 1975 159 13 0 chrX 4048661 4048975 -162601321 + ORR1A3 LTR MaLR 1 318 -8 5 615 2011 118 30 31 chrX 4049110 4049466 -162600830 + MT2B2 LTR ERVL 189 582 -2 5 615 9605 157 61 14 chrX 4049468 4051344 -162598952 + ORR1A3-int LTR MaLR 1 1963 0 5 615 1790 188 0 9 chrX 4051344 4051667 -162598629 + ORR1A3 LTR MaLR 1 320 -6 5 615 3466 133 69 16 chrX 4051667 4052158 -162598138 + Lx LINE L1 6012 6518 -136 5 615 204 40 0 0 chrX 4052158 4052183 -162598113 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 5 615 3466 133 69 16 chrX 4052183 4052302 -162597994 + Lx LINE L1 6519 6653 -1 5 615 575 227 35 0 chrX 4052392 4052533 -162597763 - B1_Mur1 SINE Alu -2 147 2 6 615 1705 142 101 39 chrX 4053322 4053660 -162596636 + ORR1B2 LTR MaLR 1 359 -8 6 615 23 33 0 0 chrX 4054362 4054392 -162595904 + AT_rich Low_complexity Low_complexity 1 30 0 6 615 328 359 65 64 chrX 4054436 4055024 -162595272 + L2a LINE L2 2796 3386 -40 6 615 2871 233 30 58 chrX 4055317 4055681 -162594615 - RMER6D LTR ERVK -4 716 368 6 615 180 0 0 0 chrX 4055681 4055701 -162594595 + (CCA)n Simple_repeat Simple_repeat 1 20 0 6 615 2871 233 30 58 chrX 4055701 4055761 -162594535 - RMER6D LTR ERVK -353 367 315 6 615 1884 137 92 3 chrX 4055761 4056099 -162594197 + RLTR9A LTR ERVK 1 368 0 6 615 2871 233 30 58 chrX 4056099 4056185 -162594111 - RMER6D LTR ERVK -406 314 231 6 615 2494 66 122 11 chrX 4056185 4056536 -162593760 - RLTR10 LTR ERVK 0 390 1 6 615 2763 236 30 60 chrX 4056536 4056744 -162593552 - RMER6D LTR ERVK -490 230 16 6 615 2025 197 36 0 chrX 4056770 4057196 -162593100 + L1_Mur2 LINE L1 383 814 -6272 6 615 1447 108 23 19 chrX 4057199 4057455 -162592841 + L1_Mur2 LINE L1 1484 1740 -4137 6 615 5623 165 11 88 chrX 4057433 4058161 -162592135 + L1_Mur2 LINE L1 2141 2863 -3023 6 615 1905 201 48 2 chrX 4058161 4058580 -162591716 - BGLII_A LTR ERVK -7 438 1 6 615 5623 165 11 88 chrX 4058580 4059500 -162590796 + L1_Mur2 LINE L1 2864 3779 -2107 6 615 4681 217 53 4 chrX 4059937 4060460 -162589836 + L1VL4 LINE L1 859 1410 -4476 7 615 2210 107 10 0 chrX 4060460 4060770 -162589526 + L1_Mus1 LINE L1 6255 6567 0 7 615 4681 188 63 8 chrX 4060770 4061613 -162588683 + L1VL4 LINE L1 1411 2304 -3582 7 615 1957 279 68 51 chrX 4061616 4062246 -162588050 + RLTR26 LTR ERVK 2 642 0 7 615 1429 141 15 12 chrX 4062253 4062512 -162587784 + L1VL4 LINE L1 2308 2567 -3319 7 76 31808 91 19 7 chrX 4062514 4067232 -162583064 + L1_Mus2 LINE L1 199 5038 -848 7 616 6002 107 6 0 chrX 4067232 4068030 -162582266 + L1_Mus1 LINE L1 5765 6567 0 7 616 31808 94 20 2 chrX 4068030 4069498 -162580798 + L1_Mus2 LINE L1 5039 6568 -1 7 616 912 184 113 7 chrX 4069516 4069800 -162580496 + L1_Mur3 LINE L1 3073 3386 -2494 7 616 5761 188 40 49 chrX 4069806 4071137 -162579159 + L1_Mur3 LINE L1 4418 5736 -144 7 616 713 346 70 19 chrX 4072316 4072799 -162577497 - Lx8 LINE L1 -236 7237 6730 7 616 1548 299 79 21 chrX 4072814 4073384 -162576912 - Lx8 LINE L1 -800 6673 6071 7 616 719 276 11 50 chrX 4073732 4074091 -162576205 + RMER19A LTR ERVK 1 259 -478 7 616 414 0 0 0 chrX 4074299 4074345 -162575951 + (TA)n Simple_repeat Simple_repeat 2 47 0 7 616 352 284 0 61 chrX 4074697 4074862 -162575434 + GA-rich Low_complexity Low_complexity 4 158 0 7 616 890 285 77 35 chrX 4077335 4077673 -162572623 - MTE2a LTR MaLR 0 379 28 8 616 476 284 60 7 chrX 4077675 4077824 -162572472 - MTE2a-int LTR MaLR 0 1580 1424 8 616 803 180 29 23 chrX 4077825 4077996 -162572300 - L1_Mur3 LINE L1 -1120 4760 4589 8 616 29 0 0 0 chrX 4080264 4080293 -162570003 + AT_rich Low_complexity Low_complexity 1 29 0 8 616 14385 137 10 8 chrX 4080322 4083421 -162566875 - L1_Mus3 LINE L1 0 6638 3531 8 616 979 158 10 13 chrX 4083403 4083596 -162566700 - L1_Mus3 LINE L1 -3724 2422 2228 8 616 625 303 25 21 chrX 4084036 4084319 -162565977 + RLTR15 LTR ERVK 3 286 -73 8 616 1613 236 40 0 chrX 4084380 4084707 -162565589 + ORR1B1 LTR MaLR 14 353 -41 8 616 474 186 0 183 chrX 4084707 4084871 -162565425 + B1_Mus2 SINE Alu 1 134 -13 8 616 231 197 14 27 chrX 4084878 4084951 -162565345 + (CAGAGA)n Simple_repeat Simple_repeat 4 75 0 8 616 351 44 0 0 chrX 4084951 4084996 -162565300 + (TC)n Simple_repeat Simple_repeat 2 46 0 8 616 279 0 0 0 chrX 4084998 4085029 -162565267 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 616 342 107 0 0 chrX 4085598 4085654 -162564642 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 9 616 279 197 212 0 chrX 4085747 4085813 -162564483 + RLTR6_Mm LTR ERV1 2 81 -573 9 616 1932 131 252 32 chrX 4085853 4086318 -162563978 + RLTR6_Mm LTR ERV1 37 603 -51 9 616 33184 34 26 0 chrX 4086319 4090554 -162559742 + RLTR6-int LTR ERV1 1 4421 -3357 9 616 7323 37 1 0 chrX 4090549 4091394 -162558902 + RLTR6-int LTR ERV1 6933 7778 0 9 616 1860 190 135 81 chrX 4091394 4091950 -162558346 + RLTR6_Mm LTR ERV1 1 586 -68 9 616 488 234 114 21 chrX 4091948 4092088 -162558208 + ORR1D1 LTR MaLR 205 357 -17 9 616 310 93 164 18 chrX 4092357 4092412 -162557884 + RMER10B LTR ERVL 1 63 -335 9 616 423 184 48 75 chrX 4092438 4092585 -162557711 + RMER17C-int LTR ERVK 2733 2875 -363 9 616 320 212 83 66 chrX 4092624 4092745 -162557551 + RMER17C-int LTR ERVK 2972 3094 -144 9 616 1506 161 75 117 chrX 4092811 4093239 -162557057 - RMER17C LTR ERVK 0 410 1 9 616 1552 183 182 6 chrX 4093254 4093589 -162556707 + RMER10B LTR ERVL 5 398 0 9 616 1216 179 13 22 chrX 4093854 4094028 -162556268 - URR1A DNA MER1_type 0 226 52 9 616 516 81 0 0 chrX 4094028 4094102 -162556194 + (TA)n Simple_repeat Simple_repeat 2 75 0 9 616 1216 179 13 22 chrX 4094102 4094155 -162556141 - URR1A DNA MER1_type -175 51 1 9 616 29 0 0 0 chrX 4095140 4095169 -162555127 + AT_rich Low_complexity Low_complexity 1 29 0 9 616 814 203 13 20 chrX 4095404 4095555 -162554741 - B1_Mur4 SINE Alu 0 150 1 1 616 411 78 130 0 chrX 4095831 4095908 -162554388 + ORR1A2 LTR MaLR 1 87 -240 1 616 1829 110 250 0 chrX 4095910 4096238 -162554058 - ORR1A2-int LTR MaLR -535 1428 1019 1 616 289 342 51 0 chrX 4096243 4096360 -162553936 + ETnERV2-int LTR ERVK 7074 7196 -210 1 616 2986 194 35 29 chrX 4096633 4097211 -162553085 - ORR1A2-int LTR MaLR -936 1027 394 1 616 2908 73 7 120 chrX 4097211 4097468 -162552828 - MTB LTR MaLR 0 400 183 1 616 1159 82 0 7 chrX 4097468 4097615 -162552681 - B1_Mm SINE Alu 0 147 2 1 616 2908 73 7 120 chrX 4097615 4097807 -162552489 - MTB LTR MaLR -218 182 2 1 616 2986 176 20 20 chrX 4097807 4098194 -162552102 - ORR1A2-int LTR MaLR -1395 397 1 1 616 2320 125 25 0 chrX 4098194 4098513 -162551783 - ORR1A2 LTR MaLR 0 327 1 1 616 1683 131 11 0 chrX 4098513 4098788 -162551508 + ORR1A2-int LTR MaLR 1686 1963 0 1 616 2085 153 3 58 chrX 4098788 4099134 -162551162 + ORR1A2 LTR MaLR 1 327 0 1 616 308 388 33 48 chrX 4099352 4099960 -162550336 + L2a LINE L2 2791 3386 -40 1 616 2824 217 69 35 chrX 4100254 4100590 -162549706 - RMER6D LTR ERVK 0 720 366 1 616 300 91 0 0 chrX 4100590 4100634 -162549662 + (CCA)n Simple_repeat Simple_repeat 3 46 0 1 616 2824 217 69 35 chrX 4100634 4100691 -162549605 - RMER6D LTR ERVK -355 365 315 1 616 2123 145 69 6 chrX 4100691 4101037 -162549259 + RLTR9A LTR ERVK 1 368 0 1 616 2824 217 69 35 chrX 4101037 4101324 -162548972 - RMER6D LTR ERVK -406 314 16 1 616 270 139 0 0 chrX 4101350 4101393 -162548903 + Lx4A LINE L1 525 567 -6519 1 616 347 45 0 0 chrX 4101410 4101454 -162548842 + RLTR1 LTR ERV1 581 624 0 1 616 4031 134 202 2 chrX 4101454 4102555 -162547741 + L1_Mur2 LINE L1 410 1746 -4131 1 616 9260 131 30 19 chrX 4102526 4103250 -162547046 + L1_Mur2 LINE L1 2140 2850 -3027 1 616 2179 188 45 2 chrX 4103250 4103677 -162546619 - BGLII_A LTR ERVK 0 445 1 1 616 9260 131 30 19 chrX 4103677 4104564 -162545732 + L1_Mur2 LINE L1 2851 3769 -2108 1 616 10942 212 89 56 chrX 4104942 4105412 -162544884 + Lx4A LINE L1 820 1414 -4463 1 616 2092 130 7 0 chrX 4105412 4105719 -162544577 + L1_Mus1 LINE L1 6259 6567 0 1 616 10942 190 171 141 chrX 4105719 4106585 -162543711 + Lx4A LINE L1 1415 2227 -3650 1 616 1497 264 38 30 chrX 4106585 4107049 -162543247 + RLTR26 LTR ERVK 1 496 -146 1 616 10942 190 171 141 chrX 4107049 4107277 -162543019 + Lx4A LINE L1 2228 2442 -3435 1 616 3130 81 5 2 chrX 4107277 4107672 -162542624 + MTA_Mm LTR MaLR 1 396 0 1 616 10942 190 171 141 chrX 4107672 4109463 -162540833 + Lx4A LINE L1 2443 4251 -1626 1 616 1256 138 0 5 chrX 4109463 4109652 -162540644 + B2_Mm2 SINE B2 1 188 -7 1 616 10942 188 159 131 chrX 4109652 4110519 -162539777 + Lx4A LINE L1 4252 5875 -1183 1 616 2725 210 31 14 chrX 4110512 4111068 -162539228 + Lx4A LINE L1 6493 7057 -1 1 616 24 0 0 0 chrX 4111068 4111092 -162539204 + AT_rich Low_complexity Low_complexity 1 24 0 1 616 3675 214 45 15 chrX 4111721 4112571 -162537725 - RMER19B LTR ERVK -27 875 1 1 616 2928 92 9 14 chrX 4115685 4116114 -162534182 - L1Md_F2 LINE L1 0 6582 6156 1 616 1016 109 0 20 chrX 4116359 4116509 -162533787 + B1_Mus2 SINE Alu 1 147 0 1 616 279 0 0 0 chrX 4116517 4116548 -162533748 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 616 960 230 140 48 chrX 4116634 4116897 -162533399 + ORR1B2 LTR MaLR 1 292 -75 1 616 2322 119 16 69 chrX 4116897 4117330 -162532966 - MT2B LTR ERVL 0 601 192 1 616 1085 90 7 7 chrX 4117362 4117508 -162532788 - B1_Mus2 SINE Alu 0 147 2 1 616 257 243 14 0 chrX 4117978 4118052 -162532244 + RSINE1 SINE B4 55 129 -36 1 616 398 219 31 20 chrX 4118130 4118228 -162532068 - RLTR23 LTR ERV1 0 430 332 1 616 306 335 38 31 chrX 4118610 4118770 -162531526 - Lx9 LINE L1 -218 7426 7266 1 616 1117 197 98 0 chrX 4118818 4119123 -162531173 - Lx9 LINE L1 -1 7643 7309 1 616 2331 151 56 12 chrX 4119124 4119553 -162530743 + RLTR11B LTR ERVK 3 450 -3 1 616 479 151 22 55 chrX 4119555 4119646 -162530650 - Lx9 LINE L1 -427 7217 7130 1 616 1184 166 28 28 chrX 4119645 4119856 -162530440 + Lx9 LINE L1 6810 7020 -624 1 616 689 156 78 0 chrX 4119897 4120025 -162530271 + B1_Mur2 SINE Alu 12 149 0 1 616 563 186 16 41 chrX 4120221 4120344 -162529952 - PB1D9 SINE Alu 0 120 1 1 616 293 68 23 0 chrX 4120425 4120469 -162529827 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 1 616 650 126 23 8 chrX 4120469 4120597 -162529699 - Lx LINE L1 -19 7039 6910 1 616 825 106 14 0 chrX 4120687 4120829 -162529467 - Lx LINE L1 0 6654 6511 1 616 1276 302 57 39 chrX 4121441 4121534 -162528762 - Lx7 LINE L1 -1384 6312 6209 1 616 1270 126 0 33 chrX 4121534 4121747 -162528549 + Lx2 LINE L1 6792 6997 0 1 616 1276 302 57 39 chrX 4121747 4121804 -162528492 - Lx7 LINE L1 -1488 6208 6160 1 616 3119 94 25 39 chrX 4121804 4122293 -162528003 - RLTR45 LTR ERVK 0 482 1 1 616 1276 302 57 39 chrX 4122293 4122752 -162527544 - Lx7 LINE L1 -1537 6159 5691 1 616 765 128 0 0 chrX 4122753 4122878 -162527418 + (TC)n Simple_repeat Simple_repeat 2 126 0 1 616 1084 72 43 0 chrX 4122883 4123022 -162527274 - B1_Mm SINE Alu 0 147 3 1 616 270 241 138 0 chrX 4123054 4123141 -162527155 - B1_Mur2 SINE Alu -2 147 49 1 616 781 296 40 80 chrX 4123146 4123784 -162526512 + RLTR18B LTR ERVK 3 569 -47 1 616 236 281 0 15 chrX 4123799 4123864 -162526432 - B1F2 SINE Alu -85 64 1 1 616 666 309 51 16 chrX 4123865 4124121 -162526175 - Lx8 LINE L1 -485 6988 6724 1 616 1692 201 75 40 chrX 4124123 4124552 -162525744 + RLTR41 LTR ERV1 1 444 -2 1 616 1750 174 31 116 chrX 4124609 4125091 -162525205 + RMER10A LTR ERVL 2 442 0 1 616 229 279 73 0 chrX 4125091 4125159 -162525137 - Lx8 LINE L1 -807 6666 6594 1 616 1376 168 109 97 chrX 4125159 4125599 -162524697 - RMER16 LTR ERVK 0 533 1 1 616 971 301 25 41 chrX 4125608 4126051 -162524245 - Lx8 LINE L1 -900 6573 6138 1 616 667 106 73 0 chrX 4126054 4126177 -162524119 - L1Md_F2 LINE L1 -1 6581 6450 1 616 4658 140 10 25 chrX 4126178 4127123 -162523173 + L1Md_A LINE L1 498 1423 -4460 1 616 253 263 0 0 chrX 4127156 4127213 -162523083 + Lx9 LINE L1 7201 7257 -387 1 616 13170 92 1 17 chrX 4127215 4129074 -162521222 - L1_Mm LINE L1 -116 5767 3940 1 616 18692 98 3 19 chrX 4129080 4131926 -162518370 + L1_Mm LINE L1 1147 3946 -1937 1 616 530 266 30 42 chrX 4131928 4132050 -162518246 - ORR1D2-int LTR MaLR -749 621 472 1 616 2063 151 67 6 chrX 4132050 4132396 -162517900 - ORR1B2 LTR MaLR 0 367 1 1 616 574 248 80 44 chrX 4132396 4132615 -162517681 - ORR1D2-int LTR MaLR -1038 471 230 1 616 534 203 100 40 chrX 4132615 4132782 -162517514 + RMER17C LTR ERVK 1 184 -226 1 616 885 61 24 30 chrX 4132782 4132950 -162517346 + (TTCTC)n Simple_repeat Simple_repeat 5 171 0 1 616 534 203 100 40 chrX 4132950 4132982 -162517314 + RMER17C LTR ERVK 185 212 -198 1 616 385 182 45 0 chrX 4132981 4133069 -162517227 + RMER17C LTR ERVK 319 410 0 1 616 728 262 9 27 chrX 4133086 4133306 -162516990 - ORR1D2-int LTR MaLR -1154 216 1 1 616 1204 263 56 28 chrX 4133306 4133666 -162516630 - ORR1D2 LTR MaLR 0 370 1 1 616 3106 278 85 42 chrX 4133785 4134114 -162516182 - Lx8 LINE L1 -2 7471 7123 1 616 714 72 0 0 chrX 4134114 4134211 -162516085 + (TTTC)n Simple_repeat Simple_repeat 3 99 0 1 616 3106 278 85 42 chrX 4134211 4134236 -162516060 - Lx8 LINE L1 -351 7122 7119 1 616 1141 83 0 0 chrX 4134236 4134381 -162515915 - B1_Mus2 SINE Alu -2 145 1 1 616 3106 278 85 42 chrX 4134381 4134932 -162515364 - Lx8 LINE L1 -355 7118 6511 1 616 501 47 0 0 chrX 4134932 4134996 -162515300 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 616 3106 278 85 42 chrX 4134996 4135335 -162514961 - Lx8 LINE L1 -963 6510 6173 1 616 274 184 13 13 chrX 4135338 4135415 -162514881 + (TATATG)n Simple_repeat Simple_repeat 4 80 0 1 616 574 259 182 42 chrX 4135434 4135813 -162514483 - L1M2 LINE L1 -1328 4815 4384 1 616 13887 103 64 12 chrX 4135877 4139308 -162510988 - MuRRS4-int LTR ERV1 -1274 3789 180 1 616 2459 143 7 17 chrX 4139398 4139811 -162510485 - RLTR9E LTR ERVK 0 409 1 1 616 421 143 0 14 chrX 4139811 4139882 -162510414 - ETnERV2-int LTR ERVK -1 7405 7336 1 616 3338 132 5 61 chrX 4140097 4140820 -162509476 - ETnERV2-int LTR ERVK -1185 6221 5775 1 616 1020 98 75 0 chrX 4140820 4140841 -162509455 - B2_Mm1a SINE B2 0 193 163 1 616 193 0 29 59 chrX 4140841 4140875 -162509421 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1 616 1020 98 75 0 chrX 4140875 4141026 -162509270 - B2_Mm1a SINE B2 -31 162 10 1 616 18312 116 23 6 chrX 4141034 4143713 -162506583 - ETnERV2-int LTR ERVK -1627 5779 3055 1 616 559 271 0 61 chrX 4143713 4143878 -162506418 - ETnERV2-int LTR ERVK -4798 2608 2454 1 616 643 165 26 9 chrX 4143895 4144011 -162506285 - RMER16-int LTR ERVK -4200 1206 1089 1 616 266 111 0 0 chrX 4144086 4144131 -162506165 - RMER16-int LTR ERVK -5218 188 144 1 616 333 100 0 20 chrX 4144581 4144632 -162505664 - ETnERV2-int LTR ERVK -5104 2140 2091 1 616 732 201 19 78 chrX 4144687 4144948 -162505348 - MMETn-int LTR ERVK -2997 317 10 1 616 2248 157 17 22 chrX 4144957 4145368 -162504928 - RLTR9E LTR ERVK 0 409 1 1 616 282 200 32 113 chrX 4145371 4145495 -162504801 - MMVL30-int LTR ERV1 -3584 114 1 1 616 1561 174 39 47 chrX 4145495 4145882 -162504414 - LTRIS4 LTR ERV1 0 507 124 1 616 192 40 0 0 chrX 4146185 4146210 -162504086 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 1 616 2932 109 75 2 chrX 4146494 4146990 -162503306 + RLTR47_MM LTR ERV1 1 532 0 1 616 1247 211 39 4 chrX 4146990 4147270 -162503026 + ORR1B1-int LTR MaLR 325 614 -895 1 616 855 243 58 10 chrX 4147324 4147532 -162502764 - RLTR41 LTR ERV1 0 446 229 1 616 844 239 14 110 chrX 4147996 4148278 -162502018 + L1VL1 LINE L1 194 448 -5974 1 616 882 115 32 6 chrX 4148280 4148438 -162501858 - RLTR10 LTR ERVK -2 388 227 1 616 252 42 0 40 chrX 4148473 4148523 -162501773 - RLTR10 LTR ERVK -83 307 260 1 616 2057 75 6 56 chrX 4148527 4148865 -162501431 - RLTR10 LTR ERVK -69 321 1 1 616 14103 21 2 12 chrX 4148867 4150905 -162499391 - RLTR10-int LTR ERVK -3 1984 41 1 616 882 115 32 6 chrX 4150917 4151075 -162499221 - RLTR10 LTR ERVK -2 388 227 1 616 252 42 0 40 chrX 4151110 4151160 -162499136 - RLTR10 LTR ERVK -83 307 260 1 616 2057 75 6 56 chrX 4151164 4151502 -162498794 - RLTR10 LTR ERVK -69 321 1 1 616 18539 143 20 15 chrX 4151505 4152928 -162497368 + L1_Mus3 LINE L1 649 2070 -3813 1 616 207 0 0 0 chrX 4152928 4152951 -162497345 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 616 18539 153 23 19 chrX 4152951 4153153 -162497143 + L1_Mus3 LINE L1 2071 2284 -3599 1 616 2586 91 0 3 chrX 4153153 4153496 -162496800 - ORR1A1 LTR MaLR -4 342 1 1 616 18539 153 23 19 chrX 4153496 4155817 -162494479 + L1_Mus3 LINE L1 2285 4613 -1270 1 616 6851 115 12 3 chrX 4155835 4156943 -162493353 + L1_Mus3 LINE L1 5515 6637 -1 1 616 267 133 26 39 chrX 4157557 4157635 -162492661 + (TA)n Simple_repeat Simple_repeat 1 77 0 1 616 240 191 0 42 chrX 4158476 4158547 -162491749 + (CCAA)n Simple_repeat Simple_repeat 2 69 0 1 616 3945 214 42 13 chrX 4161748 4162624 -162487672 + RMER19B LTR ERVK 1 902 0 1 616 2786 15 95 6 chrX 4162904 4163241 -162487055 - IAPLTR1_Mm LTR ERVK 0 367 1 1 616 29488 20 1 1 chrX 4163241 4166512 -162483784 - IAPEz-int LTR ERVK 0 6481 3210 1 616 6657 77 156 38 chrX 4166511 4167676 -162482620 - IAPEz-int LTR ERVK -5168 1313 67 1 616 953 86 159 0 chrX 4167647 4167810 -162482486 - IAPEz-int LTR ERVK -6285 196 8 1 616 2753 15 95 6 chrX 4167810 4168147 -162482149 - IAPLTR1_Mm LTR ERVK 0 367 1 1 616 24 0 0 0 chrX 4168493 4168517 -162481779 + AT_rich Low_complexity Low_complexity 1 24 0 1 616 2692 195 26 11 chrX 4168517 4169052 -162481244 - Lx4A LINE L1 -1 7057 6515 1 616 5092 238 112 60 chrX 4169052 4169871 -162480425 - Lx4A LINE L1 -1168 5882 4928 1 616 909 161 0 0 chrX 4169871 4170008 -162480288 + B1_Mus2 SINE Alu 5 141 -6 1 616 405 0 0 0 chrX 4170014 4170059 -162480237 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 1 616 5092 233 119 63 chrX 4170059 4170137 -162480159 - Lx4A LINE L1 -950 4927 4833 1 616 1268 118 0 5 chrX 4170137 4170325 -162479971 - B2_Mm2 SINE B2 -8 187 1 1 616 5092 233 119 63 chrX 4170325 4172445 -162477851 - Lx4A LINE L1 -1045 4832 2571 1 616 32514 80 2 3 chrX 4172851 4179149 -162471147 - L1Md_F2 LINE L1 0 6585 199 1 616 4350 181 48 136 chrX 4179151 4179421 -162470875 - Lx4A LINE L1 -3319 2567 2290 1 616 580 251 52 35 chrX 4179421 4179594 -162470702 - RMER13B LTR ERVK -732 176 1 1 616 4350 181 48 136 chrX 4179594 4180446 -162469850 - Lx4A LINE L1 -3319 2289 1411 1 616 2156 109 3 0 chrX 4180446 4180758 -162469538 - L1_Mus1 LINE L1 0 6567 6255 1 616 4350 218 47 54 chrX 4180758 4181272 -162469024 - Lx4A LINE L1 -4476 1410 869 1 616 9166 124 12 19 chrX 4181718 4182638 -162467658 - L1_Mur2 LINE L1 -2107 3770 2851 1 616 1839 204 45 2 chrX 4182638 4183065 -162467231 + BGLII_A LTR ERVK 1 445 0 1 616 9166 124 12 19 chrX 4183065 4183787 -162466509 - L1_Mur2 LINE L1 -3027 2850 2141 1 616 3965 140 199 4 chrX 4183792 4184903 -162465393 - L1_Mur2 LINE L1 -4164 1713 383 1 616 2995 221 38 53 chrX 4184929 4185217 -162465079 + RMER6D LTR ERVK 16 314 -406 1 616 1835 139 92 3 chrX 4185217 4185555 -162464741 - RLTR9A LTR ERVK 0 368 1 1 616 2995 221 38 53 chrX 4185555 4185613 -162464683 + RMER6D LTR ERVK 315 362 -358 1 616 198 0 0 0 chrX 4185613 4185635 -162464661 + (TGG)n Simple_repeat Simple_repeat 2 23 0 1 616 2995 221 38 53 chrX 4185635 4186003 -162464293 + RMER6D LTR ERVK 363 720 0 1 616 328 350 74 75 chrX 4186294 4186880 -162463416 - L2a LINE L2 -43 3383 2796 1 616 23 33 0 0 chrX 4186924 4186954 -162463342 + AT_rich Low_complexity Low_complexity 1 30 0 1 616 1759 135 101 36 chrX 4187658 4187995 -162462301 - ORR1B2 LTR MaLR -8 359 1 2 616 582 227 35 0 chrX 4188783 4188924 -162461372 + B1_Mur1 SINE Alu 2 147 -2 2 616 3337 141 70 13 chrX 4189014 4189133 -162461163 - Lx LINE L1 0 6654 6536 2 616 204 40 0 0 chrX 4189133 4189158 -162461138 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 2 616 3337 141 70 13 chrX 4189158 4189642 -162460654 - Lx LINE L1 -119 6535 6019 2 616 1714 194 0 9 chrX 4189642 4189970 -162460326 - ORR1A3 LTR MaLR -1 325 1 2 616 9695 154 64 16 chrX 4189970 4191842 -162458454 - ORR1A3-int LTR MaLR 0 1963 1 2 616 2050 111 30 31 chrX 4191844 4192200 -162458096 - MT2B2 LTR ERVL -2 582 189 2 616 297 350 68 27 chrX 4192240 4192387 -162457909 - RMER15 LTR ERVL -1 574 422 2 616 1960 159 13 0 chrX 4192772 4193086 -162457210 - ORR1A3 LTR MaLR -8 318 1 2 616 529 306 21 67 chrX 4193154 4193347 -162456949 - MTEb LTR MaLR -15 364 181 2 616 1496 234 87 12 chrX 4193350 4193696 -162456600 + ORR1D1 LTR MaLR 3 374 0 2 616 670 256 34 17 chrX 4193696 4193873 -162456423 - MTEb LTR MaLR -195 184 5 2 616 490 322 62 55 chrX 4194003 4194259 -162456037 + MER106B DNA MER1_type 1 258 -801 2 617 370 265 144 63 chrX 4194607 4194990 -162455306 + MER106B DNA MER1_type 445 858 -201 2 617 995 122 0 0 chrX 4195443 4195590 -162454706 - B1_Mus1 SINE Alu -1 147 1 2 617 420 71 0 0 chrX 4195666 4195722 -162454574 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 617 716 327 68 0 chrX 4195789 4195994 -162454302 - B4A SINE B4 -73 219 1 2 617 343 304 79 18 chrX 4196087 4196251 -162454045 - CYRA11_Mm Unknown Y-chromosome -225 392 219 2 617 809 200 109 0 chrX 4196107 4196282 -162454014 + URR1A DNA MER1_type 33 226 0 2 617 471 218 59 27 chrX 4196353 4196474 -162453822 + MTD LTR MaLR 282 405 -14 2 617 236 162 0 0 chrX 4196530 4196567 -162453729 + MTD LTR MaLR 1 37 -347 2 617 5751 16 0 0 chrX 4196567 4197258 -162453038 + L1Md_T LINE L1 4896 5586 -297 2 617 8941 7 0 3 chrX 4197258 4198257 -162452039 + L1Md_T LINE L1 5587 6582 0 2 617 417 230 63 19 chrX 4198261 4198381 -162451915 + MTD LTR MaLR 282 405 -14 2 617 568 179 27 0 chrX 4198437 4198549 -162451747 + ORR1C2 LTR MaLR 1 115 -263 2 617 2094 85 76 73 chrX 4198553 4198908 -162451388 - RLTR10B2 LTR ERVK -9 356 1 2 617 1558 132 75 0 chrX 4198909 4199175 -162451121 + ORR1C2 LTR MaLR 95 380 -4 2 617 2877 130 14 37 chrX 4200096 4200582 -162449714 + MT2C_Mm LTR ERVL 1 475 0 2 617 672 261 42 67 chrX 4200859 4201407 -162448889 + L1_Mus3 LINE L1 894 1429 -4451 2 617 555 153 122 0 chrX 4201420 4201551 -162448745 + Lx5 LINE L1 6904 7050 0 2 617 216 0 0 0 chrX 4201620 4201644 -162448652 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 617 5180 116 14 53 chrX 4201645 4202557 -162447739 + RLTR13A3 LTR ERVK 1 978 0 2 617 947 143 7 0 chrX 4202588 4202735 -162447561 - B1_Mus1 SINE Alu 0 148 1 2 617 6341 187 42 68 chrX 4202737 4204735 -162445561 + L1_Mus3 LINE L1 5604 6638 0 2 617 937 154 21 52 chrX 4204735 4204927 -162445369 + B2_Mm2 SINE B2 2 187 -8 2 617 1671 275 40 132 chrX 4204927 4205345 -162444951 + L1_Mus3 LINE L1 3188 3620 -2260 2 617 6225 128 20 15 chrX 4205345 4206363 -162443933 - RLTR13D5 LTR ERVK 0 1023 1 2 617 1671 275 40 132 chrX 4206363 4206615 -162443681 + L1_Mus3 LINE L1 3621 3883 -1997 2 617 885 168 7 0 chrX 4206642 4206791 -162443505 - B1_Mur4 SINE Alu 0 150 1 2 617 323 210 0 180 chrX 4206688 4206810 -162443486 - MT2B LTR ERVL -345 256 157 2 617 742 184 23 29 chrX 4206810 4206984 -162443312 + L1_Mus3 LINE L1 3901 4073 -1807 2 617 723 174 0 15 chrX 4206988 4207122 -162443174 + MT2B LTR ERVL 1 132 -469 2 617 767 122 0 0 chrX 4207177 4207292 -162443004 + ORR1A2 LTR MaLR 213 327 0 2 617 2369 79 0 0 chrX 4207661 4208001 -162442295 - L1_Mm LINE L1 -1354 4529 4190 2 617 3458 88 0 0 chrX 4208019 4208509 -162441787 + L1_Mus3 LINE L1 5787 6276 -362 2 617 21306 124 20 14 chrX 4208518 4213061 -162437235 + L1_Mus1 LINE L1 2001 6654 0 2 617 6656 110 12 2 chrX 4213067 4214524 -162435772 + L1_Mus2 LINE L1 5092 6565 -1 2 617 808 191 113 7 chrX 4214542 4214826 -162435470 + L1_Mur3 LINE L1 3073 3386 -2494 2 617 5111 190 40 47 chrX 4214832 4216160 -162434136 + L1_Mur3 LINE L1 4418 5736 -144 2 617 601 347 68 17 chrX 4217338 4217821 -162432475 - Lx8 LINE L1 -236 7237 6730 2 617 1249 305 81 21 chrX 4217836 4218405 -162431891 - Lx8 LINE L1 -800 6673 6071 2 617 704 289 6 44 chrX 4218753 4219112 -162431184 + RMER19A LTR ERVK 1 259 -478 2 617 375 23 0 0 chrX 4219320 4219364 -162430932 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 617 346 338 6 30 chrX 4219716 4219881 -162430415 + GA-rich Low_complexity Low_complexity 4 164 0 2 617 925 291 65 24 chrX 4222354 4222692 -162427604 - MTE2a LTR MaLR 0 379 28 2 617 483 284 60 7 chrX 4222694 4222843 -162427453 - MTE2a-int LTR MaLR 0 1580 1424 2 617 740 174 29 23 chrX 4222844 4223015 -162427281 - L1_Mur3 LINE L1 -1120 4760 4589 2 617 29 0 0 0 chrX 4225284 4225313 -162424983 + AT_rich Low_complexity Low_complexity 1 29 0 2 617 279 0 0 0 chrX 4225356 4225387 -162424909 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 617 13603 133 9 9 chrX 4225387 4228463 -162421833 - L1_Mus3 LINE L1 -30 6608 3531 2 617 887 118 0 7 chrX 4228457 4228602 -162421694 - L1_Mus3 LINE L1 -3499 2384 2241 2 617 658 303 25 21 chrX 4229080 4229363 -162420933 + RLTR15 LTR ERVK 3 286 -73 2 617 1661 226 40 0 chrX 4229424 4229751 -162420545 + ORR1B1 LTR MaLR 14 353 -41 2 617 457 194 0 183 chrX 4229751 4229915 -162420381 + B1_Mus2 SINE Alu 1 134 -13 2 617 231 197 14 27 chrX 4229922 4229995 -162420301 + (CAGAGA)n Simple_repeat Simple_repeat 4 75 0 2 617 231 61 0 0 chrX 4229995 4230028 -162420268 + (TC)n Simple_repeat Simple_repeat 2 34 0 2 617 432 0 0 0 chrX 4230030 4230078 -162420218 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 617 522 79 0 0 chrX 4230648 4230724 -162419572 + (GGAA)n Simple_repeat Simple_repeat 3 78 0 2 617 280 155 111 123 chrX 4231216 4231297 -162418999 + MTEa LTR MaLR 47 126 -233 2 617 380 263 0 0 chrX 4231376 4231452 -162418844 - RSINE1 SINE B4 -85 80 5 2 617 407 340 76 6 chrX 4231486 4231685 -162418611 + MTEa LTR MaLR 150 379 0 2 617 20939 155 7 44 chrX 4232220 4237418 -162412878 - L1_Mus3 LINE L1 -7 6631 1637 2 617 6961 86 6 4 chrX 4237418 4238755 -162411541 - L1Md_F2 LINE L1 -12 6570 5230 2 617 5467 88 8 4 chrX 4238756 4239557 -162410739 + L1_Mm LINE L1 4816 5619 -264 2 617 1971 134 0 0 chrX 4248004 4248302 -162401994 - L1_Mus4 LINE L1 -9 6627 6330 2 617 396 0 0 0 chrX 4251553 4251597 -162398699 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 617 3660 131 143 116 chrX 4256027 4256510 -162393786 + RMER17A2 LTR ERVK 1 445 -461 2 617 831 64 0 0 chrX 4256510 4256620 -162393676 + (TC)n Simple_repeat Simple_repeat 1 110 0 2 617 3660 131 143 116 chrX 4256620 4257018 -162393278 + RMER17A2 LTR ERVK 446 905 -1 2 617 660 163 0 1 chrX 4257181 4257297 -162392999 - ORR1B2 LTR MaLR -259 108 1 2 617 258 186 68 0 chrX 4257359 4257418 -162392878 - RLTR14-int LTR ERV1 -4933 384 322 2 617 1187 193 185 22 chrX 4257439 4257738 -162392558 + RLTR33 LTR ERVK 177 526 -152 2 617 1997 81 11 11 chrX 4257738 4258025 -162392271 + ORR1A4 LTR MaLR 1 287 -42 2 617 279 214 0 0 chrX 4259830 4259886 -162390410 + ORR1A4 LTR MaLR 274 329 0 2 617 4217 158 26 62 chrX 4259886 4260743 -162389553 + ORR1A4-int LTR MaLR 1 826 -1137 2 617 4752 158 20 6 chrX 4260741 4261576 -162388720 + ORR1A4-int LTR MaLR 712 1558 -405 2 617 10727 98 12 3 chrX 4261576 4263898 -162386398 + L1Md_F LINE L1 536 2877 -3006 2 617 1848 56 4 12 chrX 4263894 4264146 -162386150 + L1Md_F2 LINE L1 5337 5586 -297 2 617 7260 91 1 3 chrX 4264147 4265143 -162385153 + L1Md_F2 LINE L1 5589 6582 0 2 617 1026 211 4 84 chrX 4265143 4265392 -162384904 + ORR1A4-int LTR MaLR 1543 1771 -192 2 617 316 217 0 0 chrX 4265388 4265448 -162384848 + ORR1A4 LTR MaLR 261 320 -9 2 617 1175 227 18 54 chrX 4265684 4266019 -162384277 - RLTR14-int LTR ERV1 -4994 323 1 2 617 1438 169 4 4 chrX 4266021 4266270 -162384026 - RLTR14 LTR ERV1 -2 380 132 2 617 1585 174 7 3 chrX 4266270 4266559 -162383737 - RLTR14 LTR ERV1 -91 291 2 2 617 671 210 0 0 chrX 4266759 4266883 -162383413 - ORR1C1 LTR MaLR 0 378 255 2 617 2597 71 0 6 chrX 4266884 4267223 -162383073 + IAPLTR4 LTR ERVK 1 337 -8 2 617 440 198 9 38 chrX 4267230 4267335 -162382961 + IAPLTR3-int LTR ERVK 16 117 -6704 2 617 360 134 15 112 chrX 4267335 4267469 -162382827 + IAPLTR3-int LTR ERVK 834 954 -5867 2 617 286 146 9 112 chrX 4267459 4267575 -162382721 + IAPLTR3-int LTR ERVK 849 952 -6629 2 617 1156 220 107 45 chrX 4267696 4268179 -162382117 + ETnERV3-int LTR ERVK 255 668 -5469 2 617 374 185 101 0 chrX 4268177 4268296 -162382000 + ETnERV3-int LTR ERVK 1719 1849 -5557 2 617 276 194 14 69 chrX 4268327 4268399 -162381897 + ETnERV3-int LTR ERVK 2471 2538 -4868 2 617 5926 123 73 7 chrX 4268412 4269776 -162380520 + ETnERV3-int LTR ERVK 2735 4271 -3135 2 617 515 178 9 0 chrX 4269781 4269888 -162380408 + MMETn-int LTR ERVK 2357 2464 -2380 2 617 711 124 28 28 chrX 4269914 4270055 -162380241 + ETnERV3-int LTR ERVK 4530 4670 -2911 2 617 829 228 9 6 chrX 4270166 4270386 -162379910 + ETnERV3-int LTR ERVK 4925 5302 -2279 2 617 344 236 18 26 chrX 4270381 4270494 -162379802 + ETnERV3-int LTR ERVK 5416 5507 -974 2 617 555 269 35 46 chrX 4270730 4270991 -162379305 + ETnERV3-int LTR ERVK 5466 5723 -819 2 617 5797 188 3 7 chrX 4271342 4272398 -162377898 + ETnERV3-int LTR ERVK 5750 6801 -20 2 617 2632 59 0 6 chrX 4272398 4272737 -162377559 + IAPLTR4 LTR ERVK 1 337 -8 2 617 1258 195 36 68 chrX 4272726 4273007 -162377289 - ORR1C1 LTR MaLR -104 274 3 2 617 1205 48 0 7 chrX 4273228 4273376 -162376920 + B1_Mus2 SINE Alu 1 147 0 2 617 198 103 0 0 chrX 4273376 4273405 -162376891 + (A)n Simple_repeat Simple_repeat 1 29 0 2 617 6766 97 4 12 chrX 4273579 4275140 -162375156 - L1_Mus2 LINE L1 -1 6565 5016 2 617 652 159 176 41 chrX 4275338 4275508 -162374788 + B2_Mm2 SINE B2 1 193 -2 2 617 245 242 32 0 chrX 4275568 4275630 -162374666 - ID_B1 SINE B4 0 224 161 2 617 670 300 17 62 chrX 4275719 4276007 -162374289 - LTR55 LTR ERV -270 278 4 2 617 870 293 78 52 chrX 4276919 4277304 -162372992 + LTR55 LTR ERV 5 399 -149 2 617 354 251 140 25 chrX 4278117 4278317 -162371979 - L1M2 LINE L1 -2882 3261 3039 2 617 405 0 0 0 chrX 4278442 4278487 -162371809 + (TC)n Simple_repeat Simple_repeat 1 45 0 2 617 451 0 34 0 chrX 4278488 4278547 -162371749 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 617 314 175 16 16 chrX 4278680 4278744 -162371552 - Lx8 LINE L1 -315 7158 7095 2 617 307 175 18 0 chrX 4278755 4278812 -162371484 - LTRIS_Mus LTR ERV1 -266 321 264 2 617 1548 249 64 13 chrX 4278812 4279263 -162371033 - Lx8 LINE L1 -434 7039 6566 2 617 595 140 0 0 chrX 4279273 4279366 -162370930 - RMER19B LTR ERVK -12 890 798 2 617 19579 107 40 47 chrX 4279366 4279633 -162370663 + RMER16-int LTR ERVK 413 667 -4739 2 617 645 38 0 0 chrX 4279633 4279713 -162370583 + (GA)n Simple_repeat Simple_repeat 2 81 0 2 617 19579 107 40 47 chrX 4279713 4279935 -162370361 + RMER16-int LTR ERVK 668 929 -4477 2 617 4754 56 3 0 chrX 4279935 4280520 -162369776 - LTRIS_Mus LTR ERV1 0 587 1 2 617 19579 107 40 47 chrX 4280520 4283514 -162366782 + RMER16-int LTR ERVK 930 3871 -1535 2 617 6289 125 36 28 chrX 4284089 4285179 -162365117 + RMER16-int LTR ERVK 4205 5303 -103 2 617 422 147 0 0 chrX 4285286 4285361 -162364935 + RMER16-int LTR ERVK 5330 5404 -2 2 617 624 267 22 8 chrX 4285361 4285532 -162364764 + RMER16 LTR ERVK 1 259 -274 2 617 1382 90 5 5 chrX 4285686 4285876 -162364420 + B2_Mm2 SINE B2 1 190 -5 2 617 31717 98 8 5 chrX 4285994 4292301 -162357995 - L1Md_F2 LINE L1 -36 6546 238 2 617 926 183 168 0 chrX 4292301 4292492 -162357804 - URR1B DNA MER1_type -2 223 1 2 617 360 149 42 7 chrX 4292514 4292664 -162357632 + (TA)n Simple_repeat Simple_repeat 1 155 0 2 617 721 307 74 74 chrX 4292668 4292964 -162357332 - MT2A LTR ERVL -65 468 173 2 617 1876 156 16 86 chrX 4293019 4293391 -162356905 - ORR1B1 LTR MaLR -8 386 41 2 617 516 365 28 24 chrX 4293736 4293949 -162356347 + MER76 LTR ERVL 1 214 -477 2 617 7162 54 10 0 chrX 4294046 4294930 -162355366 - RLTR13B1 LTR ERVK 0 893 1 2 617 246 254 0 48 chrX 4295306 4295368 -162354928 + ID4 SINE ID 2 60 -23 3 617 28327 91 5 6 chrX 4296219 4301266 -162349030 + L1Md_Gf LINE L1 278 5413 -473 3 617 3283 62 73 0 chrX 4301266 4301730 -162348566 + L1Md_F2 LINE L1 5089 5586 -297 3 617 7570 71 3 2 chrX 4301730 4302723 -162347573 + L1Md_F2 LINE L1 5587 6580 -2 3 617 207 0 0 0 chrX 4302786 4302809 -162347487 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 3 617 321 174 263 46 chrX 4303209 4303257 -162347039 + Lx9 LINE L1 7423 7484 -160 3 617 636 14 0 0 chrX 4303257 4303330 -162346966 + (TA)n Simple_repeat Simple_repeat 2 74 0 3 617 321 174 263 46 chrX 4303330 4303456 -162346840 + Lx9 LINE L1 7485 7635 -9 3 617 529 275 0 8 chrX 4303739 4303860 -162346436 - B1F SINE Alu -1 148 29 3 617 283 314 11 44 chrX 4303885 4303975 -162346321 - MLT1-int LTR MaLR -346 1025 939 3 617 404 252 76 65 chrX 4304000 4304276 -162346020 + L1M4 LINE L1 5511 5789 -395 3 617 492 148 198 0 chrX 4304442 4304543 -162345753 - ORR1B2 LTR MaLR -246 121 1 3 617 727 264 21 104 chrX 4304585 4304928 -162345368 + Lx7 LINE L1 7235 7550 -146 3 617 1144 56 7 0 chrX 4304928 4305070 -162345226 - B1_Mm SINE Alu 0 147 5 3 617 727 264 21 104 chrX 4305070 4305207 -162345089 + Lx7 LINE L1 7551 7675 -21 3 617 568 186 123 22 chrX 4305213 4305427 -162344869 + ORR1D2-int LTR MaLR 1197 1563 -17 3 617 478 280 49 93 chrX 4305463 4305668 -162344628 + ORR1D2 LTR MaLR 158 353 -17 3 617 310 93 164 18 chrX 4305936 4305991 -162344305 + RMER10B LTR ERVL 1 63 -335 3 617 301 252 60 10 chrX 4306224 4306324 -162343972 + RMER17C-int LTR ERVK 2990 3094 -144 3 617 1406 153 75 117 chrX 4306390 4306818 -162343478 - RMER17C LTR ERVK 0 410 1 3 617 1454 180 182 6 chrX 4306833 4307168 -162343128 + RMER10B LTR ERVL 5 398 0 3 617 284 313 40 0 chrX 4307173 4307272 -162343024 - HERVL40-int LTR ERVL -2041 3489 3387 3 617 1165 170 8 43 chrX 4307433 4307609 -162342687 - URR1A DNA MER1_type 0 226 52 3 617 213 39 0 0 chrX 4307609 4307635 -162342661 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 617 1165 170 8 43 chrX 4307635 4307692 -162342604 - URR1A DNA MER1_type -175 51 1 3 617 188 35 35 0 chrX 4308675 4308704 -162341592 + (TTA)n Simple_repeat Simple_repeat 2 31 0 3 617 774 182 13 20 chrX 4308940 4309091 -162341205 - B1_Mur4 SINE Alu 0 150 1 3 617 401 78 130 0 chrX 4309367 4309444 -162340852 + ORR1A2 LTR MaLR 1 87 -240 3 617 1871 110 250 0 chrX 4309446 4309774 -162340522 - ORR1A2-int LTR MaLR -535 1428 1019 3 617 4175 184 79 16 chrX 4310169 4310746 -162339550 - ORR1A2-int LTR MaLR -936 1027 386 3 617 2817 76 5 79 chrX 4310746 4310984 -162339312 - MTB LTR MaLR 0 400 183 3 617 1115 75 0 0 chrX 4310984 4311130 -162339166 - B1_Mm SINE Alu 0 147 2 3 617 2817 76 5 79 chrX 4311130 4311322 -162338974 - MTB LTR MaLR -218 182 2 3 617 4175 184 79 16 chrX 4311322 4311711 -162338585 - ORR1A2-int LTR MaLR -1578 385 1 3 617 2165 125 25 0 chrX 4311711 4312030 -162338266 - ORR1A2 LTR MaLR 0 327 1 3 617 1719 124 11 0 chrX 4312030 4312305 -162337991 + ORR1A2-int LTR MaLR 1686 1963 0 3 617 1978 147 3 58 chrX 4312305 4312651 -162337645 + ORR1A2 LTR MaLR 1 327 0 3 617 338 367 56 57 chrX 4312868 4313497 -162336799 + L2a LINE L2 2791 3386 -40 3 617 2932 220 44 36 chrX 4313770 4314123 -162336173 - RMER6D LTR ERVK 0 720 364 3 617 300 91 0 0 chrX 4314123 4314167 -162336129 + (CCA)n Simple_repeat Simple_repeat 3 46 0 3 617 2932 220 44 36 chrX 4314167 4314224 -162336072 - RMER6D LTR ERVK -357 363 315 3 617 1909 154 69 6 chrX 4314224 4314570 -162335726 + RLTR9A LTR ERVK 1 368 0 3 617 2932 220 44 36 chrX 4314570 4314857 -162335439 - RMER6D LTR ERVK -406 314 16 3 617 260 116 0 0 chrX 4314883 4314926 -162335370 + L1_Mur2 LINE L1 151 193 -6519 3 617 345 45 0 0 chrX 4314943 4314987 -162335309 + RLTR1 LTR ERV1 581 624 0 3 617 1889 215 42 0 chrX 4314987 4315442 -162334854 + L1_Mur2 LINE L1 410 883 -6203 3 617 3625 62 32 2 chrX 4315442 4315910 -162334386 - RLTR45 LTR ERVK 0 482 1 3 617 7220 52 1 3 chrX 4315910 4316824 -162333472 - RLTR45-int LTR ERVK 0 7244 6333 3 617 2057 91 13 3 chrX 4316824 4317123 -162333173 - RLTR13B1 LTR ERVK -385 508 207 3 617 7815 46 1 8 chrX 4317145 4318160 -162332136 - RLTR45-int LTR ERVK -1172 6072 5065 3 617 3647 97 28 28 chrX 4318153 4318760 -162331536 - RLTR45-int LTR ERVK -3258 3986 3380 3 617 11322 39 47 3 chrX 4318730 4320535 -162329761 - RLTR45-int LTR ERVK -4032 3212 1329 3 617 1055 65 0 0 chrX 4321331 4321469 -162328827 - RLTR45-int LTR ERVK -6426 818 681 3 617 4096 77 107 16 chrX 4321767 4322401 -162327895 - RLTR45-int LTR ERVK -6552 692 1 3 617 3033 61 36 2 chrX 4322401 4322813 -162327483 - RLTR45 LTR ERVK 0 482 57 3 617 1915 122 367 2 chrX 4322813 4323409 -162326887 + L1_Mur2 LINE L1 933 1746 -4131 3 617 8132 138 30 20 chrX 4323388 4324106 -162326190 + L1_Mur2 LINE L1 2149 2850 -3027 3 617 1931 186 47 5 chrX 4324106 4324533 -162325763 - BGLII_A LTR ERVK 0 445 1 3 77 8132 138 30 20 chrX 4324533 4325387 -162324909 + L1_Mur2 LINE L1 2851 3736 -2141 3 618 1447 223 46 5 chrX 4325849 4326250 -162324046 + L1VL4 LINE L1 514 932 -5370 3 618 2065 114 3 0 chrX 4326250 4326558 -162323738 + L1_Mus1 LINE L1 6259 6567 0 3 618 3818 182 43 12 chrX 4326566 4327418 -162322878 + L1_Mur1 LINE L1 1426 2304 -3582 3 618 2086 275 66 54 chrX 4327420 4328054 -162322242 + RLTR26 LTR ERVK 1 642 0 3 618 8794 175 19 13 chrX 4328059 4328208 -162322088 + L1_Mur1 LINE L1 2306 2451 -3435 3 618 2725 107 5 2 chrX 4328208 4328603 -162321693 + MTA_Mm LTR MaLR 1 396 0 3 618 8794 175 19 13 chrX 4328603 4330396 -162319900 + L1_Mur1 LINE L1 2452 4260 -1626 3 618 1161 138 0 5 chrX 4330396 4330585 -162319711 + B2_Mm2 SINE B2 1 188 -7 3 618 2686 128 60 0 chrX 4330608 4331091 -162319205 + L1_Mur1 LINE L1 4874 5385 -492 3 618 2666 209 22 6 chrX 4331095 4331629 -162318667 + Lx4A LINE L1 6514 7056 -2 3 618 25 0 0 0 chrX 4331629 4331654 -162318642 + AT_rich Low_complexity Low_complexity 1 25 0 3 618 3996 223 43 15 chrX 4332274 4333131 -162317165 - RMER19B LTR ERVK -19 883 3 3 618 2598 128 57 38 chrX 4336450 4336923 -162313373 + RLTR45 LTR ERVK 1 482 0 3 618 487 80 34 51 chrX 4337467 4337585 -162312711 - L1Md_F2 LINE L1 0 6582 6467 3 618 2405 144 56 14 chrX 4337603 4338033 -162312263 + RLTR11B LTR ERVK 3 450 -3 3 618 444 174 22 55 chrX 4338035 4338126 -162312170 - Lx9 LINE L1 -427 7217 7130 3 618 823 138 0 0 chrX 4338125 4338241 -162312055 + Lx9 LINE L1 6810 6925 -719 3 618 582 227 35 0 chrX 4389020 4389161 -162261135 + B1_Mur1 SINE Alu 2 147 -2 3 618 3528 130 69 15 chrX 4389251 4389370 -162260926 - Lx LINE L1 0 6654 6536 3 618 204 40 0 0 chrX 4389370 4389395 -162260901 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 3 618 3528 130 69 15 chrX 4389395 4389885 -162260411 - Lx LINE L1 -119 6535 6014 3 618 1790 188 0 9 chrX 4389885 4390208 -162260088 - ORR1A3 LTR MaLR -6 320 1 3 618 9696 156 62 15 chrX 4390208 4392082 -162258214 - ORR1A3-int LTR MaLR 0 1963 1 3 618 2033 130 29 44 chrX 4392084 4392479 -162257817 - MT2B2 LTR ERVL -2 582 155 3 618 310 336 68 27 chrX 4392480 4392627 -162257669 - RMER15 LTR ERVL -1 574 422 3 618 1976 159 13 0 chrX 4393012 4393326 -162256970 - ORR1A3 LTR MaLR -8 318 1 3 618 530 302 26 68 chrX 4393394 4393586 -162256710 - MTE2b LTR MaLR -15 364 181 3 618 1520 231 87 12 chrX 4393589 4393935 -162256361 + ORR1D1 LTR MaLR 3 374 0 3 618 696 277 28 11 chrX 4393935 4394112 -162256184 - MTE2b LTR MaLR -195 184 5 3 618 478 328 66 59 chrX 4394242 4394498 -162255798 + MER106B DNA MER1_type 1 258 -801 3 618 245 347 16 41 chrX 4394707 4394830 -162255466 + MER106B DNA MER1_type 266 385 -674 3 618 425 259 144 63 chrX 4394846 4395229 -162255067 + MER106B DNA MER1_type 445 858 -201 3 618 1049 109 0 0 chrX 4395681 4395828 -162254468 - B1_Mus1 SINE Alu -1 147 1 3 618 384 77 0 0 chrX 4395904 4395956 -162254340 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 618 698 332 68 0 chrX 4396023 4396228 -162254068 - B4A SINE B4 -73 219 1 3 618 357 288 84 18 chrX 4396321 4396487 -162253809 - CYRA11_Mm Unknown Y-chromosome -225 392 216 3 618 812 178 114 6 chrX 4396341 4396516 -162253780 + URR1A DNA MER1_type 33 226 0 3 618 471 218 59 27 chrX 4396586 4396707 -162253589 + MTD LTR MaLR 282 405 -14 3 618 569 188 27 0 chrX 4396763 4396875 -162253421 + ORR1C2 LTR MaLR 1 115 -263 3 618 2068 93 64 72 chrX 4396879 4397238 -162253058 - RLTR10B2 LTR ERVK -9 356 1 3 618 1612 120 75 0 chrX 4397239 4397505 -162252791 + ORR1C2 LTR MaLR 95 380 -4 3 618 3013 122 12 37 chrX 4398426 4398913 -162251383 + MT2C_Mm LTR ERVL 1 475 0 3 618 204 122 0 0 chrX 4399304 4399345 -162250951 + (A)n Simple_repeat Simple_repeat 1 41 0 3 618 591 251 48 55 chrX 4399349 4399768 -162250528 + L1_Mur3 LINE L1 1012 1429 -4451 3 618 546 154 131 0 chrX 4399781 4399911 -162250385 + Lx5 LINE L1 6904 7050 0 3 618 216 0 0 0 chrX 4399979 4400003 -162250293 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 3 618 5240 109 14 53 chrX 4400004 4400916 -162249380 + RLTR13A3 LTR ERVK 1 978 0 3 618 976 137 7 0 chrX 4400946 4401092 -162249204 - B1_Mus1 SINE Alu -1 147 1 3 618 1968 228 28 46 chrX 4401094 4401807 -162248489 + L1_Mur3 LINE L1 1459 2158 -3722 3 618 6765 101 11 3 chrX 4401813 4402840 -162247456 + L1_Mus3 LINE L1 5604 6638 0 3 618 447 135 9 28 chrX 4402858 4402965 -162247331 + GA-rich Low_complexity Low_complexity 4 108 0 3 618 2514 237 52 67 chrX 4402966 4403120 -162247176 + L1_Mur3 LINE L1 3047 3187 -2693 3 618 997 137 21 52 chrX 4403120 4403312 -162246984 + B2_Mm2 SINE B2 2 187 -8 3 618 2514 237 52 67 chrX 4403312 4403726 -162246570 + L1_Mur3 LINE L1 3188 3620 -2260 3 618 6309 126 19 15 chrX 4403726 4404745 -162245551 - RLTR13D5 LTR ERVK 0 1023 1 3 618 2514 237 52 67 chrX 4404745 4405023 -162245273 + L1_Mur3 LINE L1 3621 3889 -1991 3 618 893 180 0 0 chrX 4405023 4405173 -162245123 - B1_Mur4 SINE Alu 0 150 1 3 618 2514 237 52 67 chrX 4405173 4405367 -162244929 + L1_Mur3 LINE L1 3890 4073 -1807 3 618 693 189 0 15 chrX 4405371 4405505 -162244791 + MT2B LTR ERVL 1 132 -469 3 618 762 122 0 0 chrX 4405560 4405675 -162244621 + ORR1A2 LTR MaLR 213 327 0 3 618 2394 79 0 0 chrX 4406037 4406377 -162243919 - L1_Mm LINE L1 -1354 4529 4190 3 618 5389 119 20 5 chrX 4406395 4407234 -162243062 + L1_Mus3 LINE L1 5787 6638 0 3 618 520 263 148 10 chrX 4407256 4407567 -162242729 + L1MD2 LINE L1 5638 5991 -368 3 618 23 33 0 0 chrX 4407825 4407855 -162242441 + AT_rich Low_complexity Low_complexity 1 30 0 3 618 35777 34 4 1 chrX 4409334 4414593 -162235703 - L1Md_T LINE L1 -2 6580 1301 3 618 1437 178 10 0 chrX 4414590 4414888 -162235408 - L1Md_F LINE L1 -6053 466 166 3 618 447 19 0 0 chrX 4415595 4415647 -162234649 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 618 372 97 0 0 chrX 4415647 4415708 -162234588 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 618 766 295 44 52 chrX 4415969 4416314 -162233982 - MTEa LTR MaLR 0 379 13 3 618 21 0 0 0 chrX 4416354 4416375 -162233921 + AT_rich Low_complexity Low_complexity 1 21 0 3 618 935 163 0 0 chrX 4416375 4416516 -162233780 + B1_Mur4 SINE Alu 1 141 -9 3 618 1015 92 13 0 chrX 4417104 4417257 -162233039 - L1_Mus1 LINE L1 -737 5146 4992 3 618 4791 75 5 26 chrX 4417254 4418061 -162232235 + L1_Mus1 LINE L1 5154 5932 -635 3 618 4227 134 8 56 chrX 4418061 4418863 -162231433 + RMER17A LTR ERVK 1 749 -2 3 618 4798 71 11 5 chrX 4418863 4419502 -162230794 + L1_Mus1 LINE L1 5925 6567 0 3 618 189 0 0 0 chrX 4419531 4419552 -162230744 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 3 618 603 205 160 28 chrX 4420008 4420225 -162230071 - Lx4B LINE L1 -4 7054 6788 3 618 180 0 0 0 chrX 4420226 4420246 -162230050 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 3 618 4622 161 8 3 chrX 4420337 4421212 -162229084 + L1_Mur2 LINE L1 3947 4825 -1052 4 618 4668 104 39 10 chrX 4421206 4421981 -162228315 - L1_Mur2 LINE L1 -254 5623 4827 4 618 269 161 18 0 chrX 4422488 4422544 -162227752 - MERVL_2A-int LTR ERVL -3496 2265 2209 4 618 2019 206 77 2 chrX 4422581 4423023 -162227273 + MERVL_2A-int LTR ERVL 3130 3604 -2157 4 618 28283 100 30 16 chrX 4423023 4425535 -162224761 + L1Md_F2 LINE L1 951 3476 -2407 4 618 324 48 0 0 chrX 4425535 4425577 -162224719 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 4 618 28283 100 34 17 chrX 4425577 4426342 -162223954 + L1Md_F2 LINE L1 3477 4350 -1533 4 618 3329 26 15 0 chrX 4426342 4426732 -162223564 - MTA_Mm LTR MaLR 0 396 1 4 618 28283 101 35 13 chrX 4426732 4428724 -162221572 + L1Md_F2 LINE L1 4351 6320 -262 4 618 674 144 33 46 chrX 4428736 4428889 -162221407 + L1Md_F2 LINE L1 6430 6580 -4 4 618 523 280 66 123 chrX 4429089 4429566 -162220730 + L1VL1 LINE L1 27 395 -6027 4 618 483 232 50 14 chrX 4429572 4429750 -162220546 + L1Md_T LINE L1 527 820 -5799 4 618 24539 63 163 1 chrX 4429753 4433900 -162216396 + L1Md_T LINE L1 773 5589 -297 4 618 8313 39 0 0 chrX 4433900 4434893 -162215403 + L1Md_T LINE L1 5590 6582 -3 4 618 317 0 0 0 chrX 4434893 4434937 -162215359 + L1Md_T LINE L1 6537 6580 -2 4 618 204 67 0 0 chrX 4434940 4434970 -162215326 + (A)n Simple_repeat Simple_repeat 1 30 0 4 618 21729 125 13 7 chrX 4434970 4439513 -162210783 + L1_Mus1 LINE L1 2001 6654 0 4 618 6554 113 12 2 chrX 4439519 4440976 -162209320 + L1_Mus2 LINE L1 5092 6565 -1 4 618 840 188 113 7 chrX 4440994 4441278 -162209018 + L1_Mur3 LINE L1 3073 3386 -2494 4 618 5128 191 40 47 chrX 4441284 4442613 -162207683 + L1_Mur3 LINE L1 4418 5736 -144 4 618 732 346 70 17 chrX 4443792 4444274 -162206022 - Lx8 LINE L1 -236 7237 6730 4 618 1426 303 81 21 chrX 4444289 4444858 -162205438 - Lx8 LINE L1 -800 6673 6071 4 618 656 282 6 44 chrX 4445206 4445565 -162204731 + RMER19A LTR ERVK 1 259 -478 4 618 450 0 0 0 chrX 4445773 4445823 -162204473 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 618 349 290 0 61 chrX 4446175 4446340 -162203956 + GA-rich Low_complexity Low_complexity 4 158 0 4 618 737 259 53 26 chrX 4448919 4449145 -162201151 - MTE2a LTR MaLR -120 259 28 4 618 433 291 60 7 chrX 4449147 4449296 -162201000 - MTE2a-int LTR MaLR 0 1580 1424 4 618 800 180 29 23 chrX 4449297 4449468 -162200828 - L1_Mur3 LINE L1 -1120 4760 4589 4 618 29 0 0 0 chrX 4451734 4451763 -162198533 + AT_rich Low_complexity Low_complexity 1 29 0 4 618 14249 137 11 8 chrX 4451792 4454887 -162195409 - L1_Mus3 LINE L1 0 6638 3531 4 618 989 159 10 13 chrX 4454869 4455062 -162195234 - L1_Mus3 LINE L1 -3724 2422 2228 4 618 527 296 25 16 chrX 4455502 4455746 -162194550 + RLTR15 LTR ERVK 3 248 -111 4 618 1528 229 40 0 chrX 4455846 4456173 -162194123 + ORR1B1 LTR MaLR 14 353 -41 4 618 437 155 67 88 chrX 4456173 4456337 -162193959 + B1_Mur4 SINE Alu 1 137 -13 4 618 206 211 14 27 chrX 4456344 4456417 -162193879 + (CAGAGA)n Simple_repeat Simple_repeat 4 75 0 4 77 513 32 0 0 chrX 4456417 4456480 -162193816 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 619 225 0 0 0 chrX 4456482 4456507 -162193789 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 619 450 88 0 0 chrX 4457076 4457144 -162193152 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 4 619 262 209 209 0 chrX 4457236 4457303 -162192993 + RLTR6_Mm LTR ERV1 1 81 -573 4 619 1817 114 275 49 chrX 4457343 4457794 -162192502 + RLTR6_Mm LTR ERV1 37 589 -65 4 619 32837 43 30 2 chrX 4457794 4461870 -162188426 + RLTR6-int LTR ERV1 8 4421 -3357 4 619 7377 34 1 0 chrX 4461865 4462710 -162187586 + RLTR6-int LTR ERV1 6933 7778 0 4 619 268 194 209 0 chrX 4462710 4462777 -162187519 + RLTR6_Mm LTR ERV1 1 81 -573 4 619 1716 133 272 47 chrX 4462817 4463266 -162187030 + RLTR6_Mm LTR ERV1 37 586 -68 4 619 442 234 114 21 chrX 4463264 4463404 -162186892 + ORR1D1 LTR MaLR 205 357 -17 4 619 299 93 164 18 chrX 4463673 4463728 -162186568 + RMER10B LTR ERVL 1 63 -335 4 619 325 212 83 66 chrX 4463940 4464061 -162186235 + RMER17C-int LTR ERVK 2972 3094 -144 4 619 1284 156 74 119 chrX 4464134 4464555 -162185741 - RMER17C LTR ERVK -8 402 1 4 619 1440 183 182 6 chrX 4464570 4464905 -162185391 + RMER10B LTR ERVL 5 398 0 4 619 1077 188 13 22 chrX 4465170 4465344 -162184952 - URR1A DNA MER1_type 0 226 52 4 619 480 86 0 0 chrX 4465344 4465414 -162184882 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 619 1077 188 13 22 chrX 4465414 4465467 -162184829 - URR1A DNA MER1_type -175 51 1 4 619 29 0 0 0 chrX 4466449 4466478 -162183818 + AT_rich Low_complexity Low_complexity 1 29 0 4 619 794 189 13 20 chrX 4466713 4466864 -162183432 - B1_Mur4 SINE Alu 0 150 1 4 619 385 78 130 0 chrX 4467140 4467217 -162183079 + ORR1A2 LTR MaLR 1 87 -240 4 619 1700 116 250 0 chrX 4467219 4467547 -162182749 - ORR1A2-int LTR MaLR -535 1428 1019 4 619 279 350 51 0 chrX 4467552 4467669 -162182627 + ETnERV2-int LTR ERVK 7074 7196 -210 4 619 2828 190 35 30 chrX 4467942 4468520 -162181776 - ORR1A2-int LTR MaLR -936 1027 394 4 619 2817 66 7 118 chrX 4468520 4468776 -162181520 - MTB LTR MaLR 0 400 183 4 619 1137 75 0 0 chrX 4468776 4468922 -162181374 - B1_Mm SINE Alu 0 147 2 4 619 2817 66 7 118 chrX 4468922 4469114 -162181182 - MTB LTR MaLR -218 182 2 4 619 2828 176 18 20 chrX 4469114 4469502 -162180794 - ORR1A2-int LTR MaLR -1395 397 1 4 619 2170 128 25 0 chrX 4469502 4469821 -162180475 - ORR1A2 LTR MaLR 0 327 1 4 619 1586 131 11 0 chrX 4469821 4470096 -162180200 + ORR1A2-int LTR MaLR 1686 1963 0 4 619 1899 159 3 58 chrX 4470096 4470442 -162179854 + ORR1A2 LTR MaLR 1 327 0 4 619 256 406 7 41 chrX 4470660 4470953 -162179343 + L2b LINE L2 2791 3073 -346 4 619 211 339 0 17 chrX 4471155 4471215 -162179081 + L2b LINE L2 3221 3279 -96 4 619 2592 219 69 35 chrX 4471562 4471898 -162178398 - RMER6D LTR ERVK 0 720 366 4 619 477 84 0 0 chrX 4471898 4471969 -162178327 + (CCA)n Simple_repeat Simple_repeat 3 73 0 4 619 2592 219 69 35 chrX 4471969 4472026 -162178270 - RMER6D LTR ERVK -355 365 315 4 619 1973 148 69 6 chrX 4472026 4472372 -162177924 + RLTR9A LTR ERVK 1 368 0 4 619 2592 219 69 35 chrX 4472372 4472659 -162177637 - RMER6D LTR ERVK -406 314 16 4 619 274 139 0 0 chrX 4472685 4472728 -162177568 + Lx4A LINE L1 525 567 -6519 4 619 328 45 0 0 chrX 4472745 4472789 -162177507 + RLTR1 LTR ERV1 581 624 0 4 619 4034 136 205 2 chrX 4472789 4473888 -162176408 + L1_Mur2 LINE L1 410 1746 -4131 4 619 9149 132 30 17 chrX 4473859 4474583 -162175713 + L1_Mur2 LINE L1 2140 2850 -3027 4 619 2031 181 47 5 chrX 4474583 4475010 -162175286 - BGLII_A LTR ERVK 0 445 1 4 619 9149 132 30 17 chrX 4475010 4475895 -162174401 + L1_Mur2 LINE L1 2851 3769 -2108 4 619 10703 212 77 40 chrX 4476333 4476743 -162173553 + Lx4A LINE L1 859 1414 -4463 4 619 1966 130 7 0 chrX 4476743 4477050 -162173246 + L1_Mus1 LINE L1 6259 6567 0 4 619 10703 187 171 144 chrX 4477050 4477908 -162172388 + Lx4A LINE L1 1415 2286 -3591 4 619 1496 277 75 62 chrX 4477908 4478458 -162171838 + RLTR26 LTR ERVK 1 557 -85 4 619 10703 187 171 144 chrX 4478458 4478610 -162171686 + Lx4A LINE L1 2287 2442 -3435 4 619 2959 81 5 2 chrX 4478610 4479005 -162171291 + MTA_Mm LTR MaLR 1 396 0 4 619 10703 187 171 144 chrX 4479005 4480796 -162169500 + Lx4A LINE L1 2443 4251 -1626 4 619 1126 144 5 5 chrX 4480796 4480984 -162169312 + B2_Mm2 SINE B2 1 188 -7 4 619 10703 185 154 132 chrX 4480984 4481862 -162168434 + Lx4A LINE L1 4252 5881 -757 4 619 2666 215 24 13 chrX 4481862 4482400 -162167896 + Lx4A LINE L1 6514 7057 -1 4 619 24 0 0 0 chrX 4482400 4482424 -162167872 + AT_rich Low_complexity Low_complexity 1 24 0 4 619 3664 214 45 16 chrX 4483053 4483904 -162166392 - RMER19B LTR ERVK -27 875 1 4 619 2614 125 57 38 chrX 4487003 4487476 -162162820 + RLTR45 LTR ERVK 1 482 0 4 619 2908 90 9 16 chrX 4488024 4488454 -162161842 - L1Md_F2 LINE L1 0 6582 6156 4 619 1011 109 0 20 chrX 4488699 4488849 -162161447 + B1_Mus2 SINE Alu 1 147 0 4 619 243 0 0 0 chrX 4488861 4488888 -162161408 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 619 974 227 140 48 chrX 4488974 4489237 -162161059 + ORR1B2 LTR MaLR 1 292 -75 4 619 2299 119 16 69 chrX 4489237 4489670 -162160626 - MT2B LTR ERVL 0 601 192 4 619 1100 90 7 0 chrX 4489702 4489847 -162160449 - B1_Mus2 SINE Alu 0 147 2 4 619 3346 3 0 0 chrX 4489877 4490243 -162160053 - L1Md_A LINE L1 0 6582 6217 4 619 264 230 14 0 chrX 4490694 4490768 -162159528 + RSINE1 SINE B4 55 129 -36 4 619 398 219 31 20 chrX 4490846 4490944 -162159352 - RLTR23 LTR ERV1 0 430 332 4 619 300 363 25 19 chrX 4491323 4491483 -162158813 - Lx9 LINE L1 -218 7426 7266 4 619 1079 203 98 0 chrX 4491531 4491836 -162158460 - Lx9 LINE L1 -1 7643 7309 4 619 2411 146 56 12 chrX 4491837 4492266 -162158030 + RLTR11B LTR ERVK 3 450 -3 4 619 444 174 22 55 chrX 4492268 4492359 -162157937 - Lx9 LINE L1 -427 7217 7130 4 619 1240 151 28 28 chrX 4492358 4492569 -162157727 + Lx9 LINE L1 6810 7020 -624 4 619 689 156 78 0 chrX 4492611 4492739 -162157557 + B1_Mur2 SINE Alu 12 149 0 4 619 584 178 16 41 chrX 4492935 4493058 -162157238 - PB1D9 SINE Alu 0 120 1 4 619 329 62 21 0 chrX 4493139 4493187 -162157109 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 4 619 667 141 16 8 chrX 4493187 4493316 -162156980 - Lx LINE L1 -19 7039 6910 4 619 858 92 14 0 chrX 4493406 4493548 -162156748 - Lx LINE L1 0 6654 6511 4 619 404 293 96 76 chrX 4494160 4494253 -162156043 - Lx7 LINE L1 -1384 6312 6209 4 619 1232 131 0 37 chrX 4494253 4494467 -162155829 + Lx2 LINE L1 6792 6997 0 4 619 404 293 96 76 chrX 4494467 4494525 -162155771 - Lx7 LINE L1 -1488 6208 6160 4 619 3137 96 22 39 chrX 4494525 4495015 -162155281 - RLTR45 LTR ERVK 0 482 1 4 619 404 293 96 76 chrX 4495015 4495217 -162155079 - Lx7 LINE L1 -1537 6159 5951 4 619 761 287 38 23 chrX 4495398 4495662 -162154634 + RLTR18B LTR ERVK 217 484 -28 4 619 244 274 0 0 chrX 4495678 4495742 -162154554 - B1_Mus1 SINE Alu -85 64 1 4 619 772 262 66 31 chrX 4495743 4495999 -162154297 - Lx8 LINE L1 -485 6988 6724 4 619 1648 206 75 40 chrX 4496001 4496430 -162153866 + RLTR41 LTR ERV1 1 444 -2 4 619 1750 174 31 116 chrX 4496487 4496969 -162153327 + RMER10A LTR ERVL 2 442 0 4 619 229 279 73 0 chrX 4496969 4497037 -162153259 - Lx8 LINE L1 -807 6666 6594 4 619 1433 169 97 95 chrX 4497037 4497482 -162152814 - RMER16 LTR ERVK 0 533 1 4 619 994 299 25 41 chrX 4497491 4497934 -162152362 - Lx8 LINE L1 -900 6573 6138 4 619 667 106 73 0 chrX 4497937 4498060 -162152236 - L1Md_F2 LINE L1 -1 6581 6450 4 619 4642 141 10 25 chrX 4498061 4499006 -162151290 + L1Md_A LINE L1 498 1423 -4460 4 619 253 263 0 0 chrX 4499039 4499096 -162151200 + Lx9 LINE L1 7201 7257 -387 4 619 6400 89 0 27 chrX 4499098 4500000 -162150296 - L1_Mm LINE L1 -116 5767 4890 4 619 6243 98 1 2 chrX 4500000 4500951 -162149345 - L1_Mm LINE L1 -994 4889 3940 1 619 17341 97 7 16 chrX 4500957 4503783 -162146513 + L1_Mm LINE L1 1147 3946 -1937 1 619 628 266 30 41 chrX 4503785 4503907 -162146389 - ORR1D2-int LTR MaLR -749 621 472 2 619 2037 148 67 6 chrX 4503907 4504253 -162146043 - ORR1B2 LTR MaLR 0 367 1 3 619 654 255 76 24 chrX 4504253 4504468 -162145828 - ORR1D2-int LTR MaLR -1038 471 230 2 619 593 215 98 20 chrX 4504468 4504635 -162145661 + RMER17C LTR ERVK 1 185 -225 4 619 918 55 24 30 chrX 4504635 4504803 -162145493 + (TTCTC)n Simple_repeat Simple_repeat 5 171 0 5 619 593 215 98 20 chrX 4504803 4504839 -162145457 + RMER17C LTR ERVK 186 220 -190 4 619 806 262 9 27 chrX 4504944 4505164 -162145132 - ORR1D2-int LTR MaLR -1154 216 1 2 619 1207 260 55 30 chrX 4505164 4505525 -162144771 - ORR1D2 LTR MaLR 0 370 1 2 619 22 35 0 0 chrX 4505618 4505647 -162144649 + AT_rich Low_complexity Low_complexity 1 29 0 6 619 2730 279 86 45 chrX 4505647 4505975 -162144321 - Lx8 LINE L1 -5 7468 7123 7 619 798 81 0 0 chrX 4505975 4506086 -162144210 + (TTTC)n Simple_repeat Simple_repeat 2 112 0 8 619 2730 279 86 45 chrX 4506086 4506111 -162144185 - Lx8 LINE L1 -351 7122 7119 7 619 1149 76 0 0 chrX 4506111 4506256 -162144040 - B1_Mus2 SINE Alu -2 145 1 9 619 2730 279 86 45 chrX 4506256 4506807 -162143489 - Lx8 LINE L1 -355 7118 6511 7 619 396 40 0 0 chrX 4506807 4506857 -162143439 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 619 2730 279 86 45 chrX 4506857 4507194 -162143102 - Lx8 LINE L1 -963 6510 6175 7 619 301 177 0 25 chrX 4507195 4507276 -162143020 + (TATATG)n Simple_repeat Simple_repeat 2 80 0 1 619 528 254 183 37 chrX 4507319 4507674 -162142622 - L1M2 LINE L1 -1353 4790 4384 1 619 12984 105 64 11 chrX 4507738 4511167 -162139129 - MuRRS4-int LTR ERV1 -1274 3789 180 1 619 2417 150 5 14 chrX 4511257 4511670 -162138626 - RLTR9E LTR ERVK 0 409 1 1 619 407 118 0 14 chrX 4511672 4511741 -162138555 - ETnERV2-int LTR ERVK -3 7403 7336 1 619 20992 113 21 28 chrX 4511957 4512681 -162137615 - ETnERV2-int LTR ERVK -984 6422 5780 1 619 1124 101 83 11 chrX 4512681 4512702 -162137594 - B2_Mm1t SINE B2 0 193 161 1 619 193 0 29 59 chrX 4512702 4512736 -162137560 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1 619 1124 101 83 11 chrX 4512736 4512894 -162137402 - B2_Mm1t SINE B2 -33 160 1 1 619 20992 113 21 28 chrX 4512894 4514726 -162135570 - ETnERV2-int LTR ERVK -1627 5779 3934 1 619 567 43 0 0 chrX 4514726 4514796 -162135500 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 619 20992 113 21 28 chrX 4514796 4515630 -162134666 - ETnERV2-int LTR ERVK -3473 3933 3056 1 619 486 271 0 61 chrX 4515630 4515795 -162134501 - ETnERV2-int LTR ERVK -4798 2608 2454 1 619 592 174 26 9 chrX 4515812 4515928 -162134368 - RMER16-int LTR ERVK -4200 1206 1089 1 619 272 111 0 0 chrX 4516003 4516048 -162134248 - RMER16-int LTR ERVK -5218 188 144 1 619 308 100 0 20 chrX 4516498 4516549 -162133747 - ETnERV2-int LTR ERVK -5104 2140 2091 1 619 659 201 18 79 chrX 4516604 4516864 -162133432 - MMETn-int LTR ERVK -2997 317 10 1 619 2273 152 17 22 chrX 4516873 4517284 -162133012 - RLTR9E LTR ERVK 0 409 1 1 619 1670 182 39 42 chrX 4517411 4517796 -162132500 - LTRIS4 LTR ERV1 0 507 124 2 619 189 0 0 0 chrX 4518099 4518120 -162132176 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 2 619 2897 107 75 2 chrX 4518407 4518903 -162131393 + RLTR47_MM LTR ERV1 1 532 0 2 619 1347 230 56 6 chrX 4518903 4519233 -162131063 + ORR1B1-int LTR MaLR 325 728 -852 2 619 898 261 53 10 chrX 4519237 4519446 -162130850 - RLTR41 LTR ERV1 0 446 229 2 619 17081 154 21 41 chrX 4519911 4521614 -162128682 + L1_Mus3 LINE L1 410 2070 -3813 2 619 207 0 0 0 chrX 4521614 4521637 -162128659 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2 619 17081 155 22 18 chrX 4521637 4521837 -162128459 + L1_Mus3 LINE L1 2071 2277 -3606 2 619 2555 87 6 3 chrX 4521837 4522182 -162128114 - ORR1A1 LTR MaLR 0 346 1 2 619 17081 155 22 18 chrX 4522182 4524505 -162125791 + L1_Mus3 LINE L1 2278 4613 -1270 2 619 6346 117 12 1 chrX 4524523 4525623 -162124673 + L1_Mus3 LINE L1 5515 6632 -6 2 619 285 130 25 38 chrX 4526245 4526325 -162123971 + (TA)n Simple_repeat Simple_repeat 1 79 0 2 619 254 176 0 42 chrX 4527166 4527237 -162123059 + (CCAA)n Simple_repeat Simple_repeat 2 69 0 2 619 4099 219 42 13 chrX 4530442 4531312 -162118984 + RMER19B LTR ERVK 1 896 -6 3 619 2504 207 30 11 chrX 4531961 4532494 -162117802 - Lx4A LINE L1 -1 7057 6515 3 619 3972 161 43 5 chrX 4532502 4533307 -162116989 - L1_Mur2 LINE L1 -388 5792 4922 3 619 917 148 0 0 chrX 4533314 4533449 -162116847 + B1_Mus2 SINE Alu 5 139 -8 3 619 198 0 0 0 chrX 4533458 4533480 -162116816 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 3 619 1352 102 0 5 chrX 4533557 4533745 -162116551 - B2_Mm2 SINE B2 -8 187 1 3 619 2869 174 11 0 chrX 4533745 4534307 -162115989 - L1_Mur2 LINE L1 -1626 4251 3684 3 619 577 222 43 0 chrX 4534691 4534808 -162115488 - ETnERV2-int LTR ERVK -214 7192 7071 3 619 2445 151 123 20 chrX 4534811 4535412 -162114884 - L1_Mur2 LINE L1 -2190 3696 3034 3 619 26014 143 27 39 chrX 4535407 4542028 -162108268 - L1Md_T LINE L1 0 6582 220 3 619 426 104 31 0 chrX 4542259 4542355 -162107941 + (TA)n Simple_repeat Simple_repeat 2 100 0 3 619 9173 108 46 6 chrX 4542355 4544326 -162105970 - L1Md_F2 LINE L1 -21 6561 4469 3 619 7674 42 0 0 chrX 4544318 4545398 -162104898 - L1Md_T LINE L1 0 6582 5503 4 619 612 26 0 0 chrX 4545398 4545474 -162104822 + LSU-rRNA_Hsa rRNA rRNA 2293 2368 -2667 4 619 18675 106 49 8 chrX 4545470 4545605 -162104691 - L1Md_F2 LINE L1 -1397 4486 4352 3 619 3327 28 15 0 chrX 4545605 4545995 -162104301 + MTA_Mm LTR MaLR 1 396 0 4 619 18675 106 49 8 chrX 4545995 4546759 -162103537 - L1Md_F2 LINE L1 -1532 4351 3492 3 619 270 0 0 0 chrX 4546759 4546789 -162103507 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 4 619 18675 105 41 8 chrX 4546789 4549298 -162100998 - L1Md_F2 LINE L1 -2392 3491 951 3 619 1971 213 77 2 chrX 4549298 4549740 -162100556 - MERVL_2A-int LTR ERVL -2157 3604 3130 4 619 254 179 18 0 chrX 4549777 4549833 -162100463 + MERVL_2A-int LTR ERVL 2209 2265 -3496 4 619 5957 69 3 16 chrX 4550037 4551296 -162099000 - L1Md_T LINE L1 -198 6384 5154 4 619 1005 105 0 0 chrX 4551293 4551446 -162098850 + L1Md_T LINE L1 4992 5144 -739 4 619 205 288 0 0 chrX 4551803 4551862 -162098434 + T-rich Low_complexity Low_complexity 1 59 0 4 619 957 156 0 0 chrX 4552037 4552178 -162098118 - B1_Mur4 SINE Alu -9 141 1 4 619 21 0 0 0 chrX 4552178 4552199 -162098097 + AT_rich Low_complexity Low_complexity 1 21 0 4 619 784 279 66 52 chrX 4552239 4552584 -162097712 + MTEa LTR MaLR 13 379 0 5 619 216 0 0 0 chrX 4552845 4552869 -162097427 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 619 309 26 0 0 chrX 4552869 4552906 -162097390 + (GA)n Simple_repeat Simple_repeat 2 39 0 5 619 1431 181 10 0 chrX 4553613 4553911 -162096385 + L1Md_T LINE L1 263 563 -6053 5 619 26286 27 4 1 chrX 4553908 4558183 -162092113 + L1Md_T LINE L1 1301 5586 -297 5 619 8080 39 15 2 chrX 4558183 4559164 -162091132 + L1Md_T LINE L1 5587 6580 -2 5 619 23 33 0 0 chrX 4560643 4560673 -162089623 + AT_rich Low_complexity Low_complexity 1 30 0 5 619 517 269 148 10 chrX 4560930 4561241 -162089055 - L1MD2 LINE L1 -368 5991 5638 5 619 5381 120 20 5 chrX 4561263 4562102 -162088194 - L1_Mus3 LINE L1 0 6638 5787 5 619 2394 79 0 0 chrX 4562120 4562460 -162087836 + L1_Mm LINE L1 4190 4529 -1354 5 619 762 122 0 0 chrX 4562822 4562937 -162087359 - ORR1A2 LTR MaLR 0 327 213 5 619 693 189 0 15 chrX 4562992 4563126 -162087170 - MT2B LTR ERVL -469 132 1 5 619 1528 201 40 79 chrX 4563130 4563324 -162086972 - L1_Mur3 LINE L1 -1807 4073 3890 6 619 893 180 0 0 chrX 4563324 4563474 -162086822 + B1_Mur4 SINE Alu 1 150 0 6 619 1528 201 40 79 chrX 4563474 4563750 -162086546 - L1_Mur3 LINE L1 -1991 3889 3621 6 619 4996 123 12 16 chrX 4563754 4564524 -162085772 + RLTR13D5 LTR ERVK 1 767 -256 6 619 1218 126 8 75 chrX 4564522 4564763 -162085533 - RLTR13A LTR ERVK -630 225 1 6 619 183 42 0 0 chrX 4564764 4564788 -162085508 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 6 619 554 146 131 0 chrX 4564856 4564986 -162085310 - Lx5 LINE L1 0 7050 6904 6 619 665 263 63 53 chrX 4564999 4565410 -162084886 - L1_Mur3 LINE L1 -4451 1429 1017 6 619 266 67 0 22 chrX 4565410 4565456 -162084840 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 6 619 665 257 70 65 chrX 4565456 4565574 -162084722 - L1_Mur3 LINE L1 -6712 1016 895 6 619 3022 122 12 37 chrX 4565849 4566336 -162083960 - MT2C_Mm LTR ERVL 0 475 1 6 619 1533 135 75 0 chrX 4567257 4567523 -162082773 - ORR1C2 LTR MaLR -4 380 95 6 619 2101 87 64 72 chrX 4567524 4567883 -162082413 + RLTR10B2 LTR ERVK 1 356 -9 6 619 587 179 27 0 chrX 4567887 4567999 -162082297 - ORR1C2 LTR MaLR -263 115 1 6 619 471 218 59 27 chrX 4568055 4568176 -162082120 - MTD LTR MaLR -14 405 282 7 619 801 184 114 6 chrX 4568246 4568421 -162081875 - URR1A DNA MER1_type 0 226 33 7 619 347 294 84 18 chrX 4568275 4568441 -162081855 + CYRA11_Mm Unknown Y-chromosome 216 392 -225 7 619 679 335 70 0 chrX 4568534 4568734 -162081562 + B4A SINE B4 1 214 -78 7 619 438 69 0 0 chrX 4568806 4568864 -162081432 + (CA)n Simple_repeat Simple_repeat 2 59 0 7 619 1049 109 0 0 chrX 4568940 4569087 -162081209 + B1_Mus1 SINE Alu 1 147 -1 7 619 518 291 182 46 chrX 4569540 4570062 -162080234 - MER106B DNA MER1_type -201 858 266 7 619 498 322 62 55 chrX 4570271 4570527 -162079769 - MER106B DNA MER1_type -801 258 1 7 619 706 271 28 11 chrX 4570657 4570834 -162079462 + MTE2b LTR MaLR 5 184 -195 7 619 1520 231 87 12 chrX 4570834 4571180 -162079116 - ORR1D1 LTR MaLR 0 374 3 7 619 543 296 26 68 chrX 4571183 4571375 -162078921 + MTE2b LTR MaLR 181 364 -15 7 619 1954 162 13 0 chrX 4571443 4571757 -162078539 + ORR1A3 LTR MaLR 1 318 -8 7 619 498 325 145 24 chrX 4572040 4572289 -162078007 + RMER15 LTR ERVL 296 574 -1 8 619 2042 126 29 44 chrX 4572290 4572685 -162077611 + MT2B2 LTR ERVL 155 582 -2 8 619 9727 153 63 17 chrX 4572687 4574564 -162075732 + ORR1A3-int LTR MaLR 1 1963 0 8 619 1798 188 0 9 chrX 4574564 4574887 -162075409 + ORR1A3 LTR MaLR 1 320 -6 8 619 3492 131 69 15 chrX 4574887 4575377 -162074919 + Lx LINE L1 6012 6518 -136 8 619 204 40 0 0 chrX 4575377 4575402 -162074894 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 8 619 3492 131 69 15 chrX 4575402 4575521 -162074775 + Lx LINE L1 6519 6653 -1 8 619 575 227 35 0 chrX 4575611 4575752 -162074544 - B1_Mur1 SINE Alu -2 147 2 8 619 1703 142 101 39 chrX 4576543 4576881 -162073415 + ORR1B2 LTR MaLR 1 359 -8 8 619 23 33 0 0 chrX 4577583 4577613 -162072683 + AT_rich Low_complexity Low_complexity 1 30 0 8 619 328 359 65 64 chrX 4577657 4578245 -162072051 + L2a LINE L2 2796 3386 -40 8 619 2930 225 31 56 chrX 4578538 4578902 -162071394 - RMER6D LTR ERVK -4 716 363 8 619 225 0 0 0 chrX 4578902 4578927 -162071369 + (CCA)n Simple_repeat Simple_repeat 2 26 0 9 619 2930 225 31 56 chrX 4578927 4578985 -162071311 - RMER6D LTR ERVK -358 362 312 8 619 1884 137 92 3 chrX 4578985 4579323 -162070973 + RLTR9A LTR ERVK 1 368 0 9 619 2930 225 31 56 chrX 4579323 4579409 -162070887 - RMER6D LTR ERVK -409 311 231 8 619 2296 75 122 11 chrX 4579409 4579760 -162070536 - RLTR10 LTR ERVK 0 390 1 9 619 2930 225 31 56 chrX 4579760 4579968 -162070328 - RMER6D LTR ERVK -490 230 16 8 619 1922 193 36 0 chrX 4579994 4580420 -162069876 + L1_Mur2 LINE L1 383 814 -6272 9 619 1320 112 24 16 chrX 4580423 4580678 -162069618 + L1_Mur2 LINE L1 1484 1740 -4137 9 619 5205 164 11 88 chrX 4580663 4581384 -162068912 + L1_Mur2 LINE L1 2149 2864 -3022 9 619 1952 196 48 2 chrX 4581384 4581803 -162068493 - BGLII_A LTR ERVK -7 438 1 9 619 5205 164 11 88 chrX 4581803 4582723 -162067573 + L1_Mur2 LINE L1 2865 3779 -2107 9 619 4168 216 53 5 chrX 4583169 4583683 -162066613 + L1VL4 LINE L1 869 1410 -4476 9 619 2126 103 6 0 chrX 4583683 4583994 -162066302 + L1_Mus1 LINE L1 6255 6567 0 9 619 4168 189 65 9 chrX 4583994 4584836 -162065460 + L1VL4 LINE L1 1411 2304 -3582 9 619 1937 281 68 51 chrX 4584839 4585469 -162064827 + RLTR26 LTR ERVK 2 642 0 9 619 1350 137 15 12 chrX 4585476 4585735 -162064561 + L1_Mur1 LINE L1 2308 2567 -3319 9 77 29505 91 20 7 chrX 4585737 4590456 -162059840 + L1_Mus2 LINE L1 199 5038 -848 9 620 5686 100 6 0 chrX 4590456 4591254 -162059042 + L1_Mus1 LINE L1 5765 6567 0 1 620 29505 96 21 3 chrX 4591254 4592718 -162057578 + L1_Mus2 LINE L1 5039 6568 -1 9 620 758 191 112 14 chrX 4592736 4593022 -162057274 + L1_Mur3 LINE L1 3073 3386 -2494 1 620 5192 188 40 47 chrX 4593028 4594357 -162055939 + L1_Mur3 LINE L1 4418 5736 -144 1 620 620 344 70 17 chrX 4595536 4596018 -162054278 - Lx8 LINE L1 -236 7237 6730 1 620 1329 302 81 21 chrX 4596033 4596602 -162053694 - Lx8 LINE L1 -800 6673 6071 1 620 724 284 6 44 chrX 4596950 4597309 -162052987 + RMER19A LTR ERVK 1 259 -478 1 620 261 0 0 0 chrX 4597517 4597546 -162052750 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 620 366 277 0 61 chrX 4597899 4598064 -162052232 + GA-rich Low_complexity Low_complexity 4 158 0 1 620 885 291 77 35 chrX 4600537 4600875 -162049421 - MTE2a LTR MaLR 0 379 28 1 620 483 284 60 7 chrX 4600877 4601026 -162049270 - MTE2a-int LTR MaLR 0 1580 1424 1 620 723 180 29 23 chrX 4601027 4601198 -162049098 - L1_Mur3 LINE L1 -1120 4760 4589 1 620 29 0 0 0 chrX 4603465 4603494 -162046802 + AT_rich Low_complexity Low_complexity 1 29 0 1 620 11284 131 9 7 chrX 4603529 4606212 -162044084 - L1_Mus3 LINE L1 -6 6632 3942 1 620 2987 114 0 2 chrX 4656212 4656678 -161993618 + L1_Mm LINE L1 2413 2877 -3006 1 620 1747 60 4 16 chrX 4656674 4656927 -161993369 + L1Md_F2 LINE L1 5337 5586 -297 1 620 7301 88 1 4 chrX 4656928 4657924 -161992372 + L1Md_F2 LINE L1 5589 6581 -1 1 620 1023 211 4 84 chrX 4657924 4658173 -161992123 + ORR1A4-int LTR MaLR 1543 1771 -192 1 620 325 213 0 0 chrX 4658169 4658230 -161992066 + ORR1A4 LTR MaLR 261 321 -8 1 620 1219 241 12 36 chrX 4658465 4658796 -161991500 - RLTR14-int LTR ERV1 -4994 323 1 1 620 2106 169 3 3 chrX 4658798 4659177 -161991119 - RLTR14 LTR ERV1 -2 380 2 1 620 617 195 0 38 chrX 4659377 4659500 -161990796 - ORR1C1 LTR MaLR 0 378 261 1 620 2594 68 0 6 chrX 4659500 4659839 -161990457 + IAPLTR4 LTR ERVK 1 337 -8 1 620 347 270 17 34 chrX 4659845 4659964 -161990332 + IAPLTR3-int LTR ERVK 1 117 -6704 1 620 392 110 18 99 chrX 4659964 4660075 -161990221 + IAPLTR3-int LTR ERVK 834 935 -5886 1 620 272 165 9 112 chrX 4660088 4660204 -161990092 + IAPLTR3-int LTR ERVK 849 952 -6629 1 620 1128 224 95 43 chrX 4660325 4660766 -161989530 + ETnERV3-int LTR ERVK 255 623 -4783 1 620 396 248 88 0 chrX 4660814 4660927 -161989369 + RLTR19-int LTR ERVK 938 1060 -5077 1 620 272 221 0 68 chrX 4660958 4661031 -161989265 + ETnERV3-int LTR ERVK 2471 2538 -4868 1 620 6057 124 55 6 chrX 4661044 4662407 -161987889 + ETnERV3-int LTR ERVK 2735 4271 -3135 1 620 515 187 12 0 chrX 4662409 4662528 -161987768 + ETnERV3-int LTR ERVK 2357 2464 -2380 1 620 773 59 0 0 chrX 4662545 4662647 -161987649 + IAPLTR3-int LTR ERVK 4530 4631 -2950 1 620 929 206 2 14 chrX 4662799 4663019 -161987277 + IAPLTR3-int LTR ERVK 4925 5302 -2279 1 620 315 211 26 35 chrX 4663014 4663127 -161987169 + IAPLTR3-int LTR ERVK 5416 5507 -974 1 620 583 268 36 43 chrX 4663366 4663643 -161986653 + IAPLTR3-int LTR ERVK 5469 5743 -799 1 620 2487 275 5 20 chrX 4663891 4664605 -161985691 + IAPLTR3-int LTR ERVK 5750 6370 -451 1 620 980 54 8 0 chrX 4664605 4664734 -161985562 + IAPLTR3-int LTR ERVK 6672 6801 -20 1 620 2611 68 0 9 chrX 4664734 4665074 -161985222 + IAPLTR4 LTR ERVK 1 337 -8 1 620 1261 195 36 68 chrX 4665063 4665344 -161984952 - ORR1C1 LTR MaLR -104 274 3 1 620 1239 48 0 0 chrX 4665565 4665712 -161984584 + B1_Mus2 SINE Alu 1 147 0 1 620 6694 100 4 12 chrX 4665914 4667475 -161982821 - L1_Mus2 LINE L1 0 6566 5016 1 620 740 136 179 36 chrX 4667674 4667842 -161982454 + B2_Mm2 SINE B2 1 192 -3 1 620 203 184 0 0 chrX 4667864 4667902 -161982394 + T-rich Low_complexity Low_complexity 1 38 0 1 620 245 242 32 0 chrX 4667903 4667965 -161982331 - ID_B1 SINE B4 0 224 161 1 620 594 317 14 62 chrX 4668054 4668343 -161981953 - LTR55 LTR ERV -270 278 4 1 620 984 281 64 58 chrX 4669253 4669646 -161980650 + LTR55 LTR ERV 5 399 -149 1 620 365 251 140 25 chrX 4670459 4670659 -161979637 - L1M2 LINE L1 -2882 3261 3039 1 620 441 0 0 0 chrX 4670794 4670843 -161979453 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 620 241 222 16 16 chrX 4670976 4671040 -161979256 - Lx8 LINE L1 -315 7158 7095 1 620 319 158 18 0 chrX 4671051 4671108 -161979188 - LTRIS_Mus LTR ERV1 -266 321 264 1 620 1517 256 64 13 chrX 4671108 4671559 -161978737 - Lx8 LINE L1 -434 7039 6566 1 620 594 118 0 11 chrX 4671569 4671663 -161978633 - RMER19B LTR ERVK -12 890 798 1 620 5919 104 36 34 chrX 4671663 4672197 -161978099 + RMER16-int LTR ERVK 413 930 -4476 1 620 4780 56 3 0 chrX 4672197 4672782 -161977514 - LTRIS_Mus LTR ERV1 0 587 1 1 620 5919 104 36 34 chrX 4672782 4673257 -161977039 + RMER16-int LTR ERVK 931 1424 -3982 1 620 14235 97 44 8 chrX 4673306 4675561 -161974735 + RMER16-int LTR ERVK 1327 3661 -1745 1 620 6283 53 3 0 chrX 4675572 4676351 -161973945 + L1Md_A LINE L1 5800 6580 -2 1 620 251 309 36 0 chrX 4676678 4676762 -161973534 + RMER16-int LTR ERVK 4389 4475 -1662 1 620 525 170 162 47 chrX 4676839 4677030 -161973266 + Lx9 LINE L1 7423 7635 -9 1 620 529 275 0 8 chrX 4677313 4677434 -161972862 - B1F SINE Alu -1 148 29 1 620 323 259 70 58 chrX 4677574 4677849 -161972447 + L1M3 LINE L1 5511 5789 -395 1 620 492 148 198 0 chrX 4678015 4678116 -161972180 - ORR1B2 LTR MaLR -246 121 1 1 620 681 250 45 134 chrX 4678158 4678503 -161971793 + Lx7 LINE L1 7235 7557 -139 1 620 1158 56 7 0 chrX 4678503 4678645 -161971651 - B1_Mm SINE Alu 0 147 5 1 620 681 250 45 134 chrX 4678645 4678770 -161971526 + Lx7 LINE L1 7558 7663 -33 1 620 587 179 123 22 chrX 4678788 4679002 -161971294 + ORR1D2-int LTR MaLR 1197 1563 -17 1 620 266 228 200 38 chrX 4679087 4679192 -161971104 + RLTR6_Mm LTR ERV1 1 122 -532 1 620 1873 144 254 29 chrX 4679194 4679643 -161970653 + RLTR6_Mm LTR ERV1 37 586 -68 1 620 454 266 71 7 chrX 4679641 4679781 -161970515 + ORR1D2 LTR MaLR 205 353 -17 1 620 319 93 164 18 chrX 4680050 4680105 -161970191 + RMER10B LTR ERVL 1 63 -335 1 620 368 184 48 75 chrX 4680131 4680278 -161970018 + RMER17C-int LTR ERVK 2733 2875 -363 1 620 289 204 91 64 chrX 4680328 4680438 -161969858 + RMER17C-int LTR ERVK 2982 3094 -144 1 620 1339 161 75 117 chrX 4680504 4680932 -161969364 - RMER17C LTR ERVK 0 410 1 1 620 1366 195 182 6 chrX 4680947 4681282 -161969014 + RMER10B LTR ERVL 5 398 0 1 620 1060 187 4 89 chrX 4681547 4681794 -161968502 - URR1A DNA MER1_type 0 226 1 1 620 29 0 0 0 chrX 4682774 4682803 -161967493 + AT_rich Low_complexity Low_complexity 1 29 0 1 620 750 212 20 0 chrX 4683043 4683189 -161967107 - B1_Mur4 SINE Alu -1 149 1 1 620 401 78 130 0 chrX 4683465 4683542 -161966754 + ORR1A2 LTR MaLR 1 87 -240 1 620 1871 110 250 0 chrX 4683544 4683872 -161966424 - ORR1A2-int LTR MaLR -535 1428 1019 1 620 260 342 51 0 chrX 4683877 4683994 -161966302 + ETnERV2-int LTR ERVK 7074 7196 -210 1 620 4114 181 89 27 chrX 4684267 4684845 -161965451 - ORR1A2-int LTR MaLR -936 1027 385 1 620 2663 63 6 166 chrX 4684845 4685127 -161965169 - MTB LTR MaLR 0 400 183 1 620 1121 82 0 0 chrX 4685127 4685273 -161965023 - B1_Mm SINE Alu 0 147 2 1 620 2663 63 6 166 chrX 4685273 4685465 -161964831 - MTB LTR MaLR -218 182 2 1 620 4114 181 89 27 chrX 4685465 4685853 -161964443 - ORR1A2-int LTR MaLR -1579 384 1 1 620 2167 125 25 0 chrX 4685853 4686172 -161964124 - ORR1A2 LTR MaLR 0 327 1 1 620 1669 138 11 0 chrX 4686172 4686447 -161963849 + ORR1A2-int LTR MaLR 1686 1963 0 1 620 1933 153 3 58 chrX 4686447 4686793 -161963503 + ORR1A2 LTR MaLR 1 327 0 1 620 335 367 54 55 chrX 4687011 4687640 -161962656 + L2a LINE L2 2791 3386 -40 1 620 3005 212 44 36 chrX 4687913 4688266 -161962030 - RMER6D LTR ERVK 0 720 364 1 620 300 91 0 0 chrX 4688266 4688310 -161961986 + (CCA)n Simple_repeat Simple_repeat 3 46 0 1 620 3005 212 44 36 chrX 4688310 4688367 -161961929 - RMER6D LTR ERVK -357 363 315 1 620 1811 163 70 3 chrX 4688367 4688712 -161961584 + RLTR9A LTR ERVK 1 368 0 1 620 3005 212 44 36 chrX 4688712 4688999 -161961297 - RMER6D LTR ERVK -406 314 16 1 620 260 116 0 0 chrX 4689025 4689068 -161961228 + L1_Mur2 LINE L1 525 567 -6519 1 620 345 45 0 0 chrX 4689085 4689129 -161961167 + RLTR1 LTR ERV1 581 624 0 1 620 1978 204 42 0 chrX 4689129 4689584 -161960712 + L1_Mur2 LINE L1 36 509 -6203 1 620 3538 70 30 2 chrX 4689584 4690053 -161960243 - RLTR45 LTR ERVK 0 482 1 1 620 7284 47 1 3 chrX 4690053 4690967 -161959329 - RLTR45-int LTR ERVK 0 7244 6333 1 620 2057 91 13 3 chrX 4690967 4691266 -161959030 - RLTR13B1 LTR ERVK -385 508 207 1 620 7794 47 1 7 chrX 4691288 4692300 -161957996 - RLTR45-int LTR ERVK -1172 6072 5067 1 620 3550 100 30 28 chrX 4692295 4692901 -161957395 - RLTR45-int LTR ERVK -3258 3986 3380 1 620 11343 37 47 3 chrX 4692871 4694677 -161955619 - RLTR45-int LTR ERVK -4032 3212 1329 1 620 1018 72 0 0 chrX 4695470 4695608 -161954688 - RLTR45-int LTR ERVK -6426 818 681 1 620 3689 72 116 31 chrX 4695906 4696317 -161953979 - RLTR45-int LTR ERVK -6552 692 248 1 620 1201 41 0 14 chrX 4696317 4696465 -161953831 + B1_Mus2 SINE Alu 2 147 0 1 620 3689 72 116 31 chrX 4696465 4696641 -161953655 - RLTR45-int LTR ERVK -6997 247 55 1 620 7207 66 4 7 chrX 4696648 4697258 -161953038 + L1_Mus1 LINE L1 5323 5932 -635 1 620 4323 132 122 20 chrX 4697258 4698063 -161952233 + RMER17D LTR ERVK 1 887 -2 1 620 7207 58 7 12 chrX 4698063 4698702 -161951594 + L1_Mus1 LINE L1 5933 6567 0 1 620 288 0 0 0 chrX 4698728 4698760 -161951536 + (CAAA)n Simple_repeat Simple_repeat 3 34 0 1 620 993 166 171 22 chrX 4699213 4699441 -161950855 - Lx5 LINE L1 -1 7049 6788 1 620 4660 161 8 2 chrX 4699552 4700427 -161949869 + L1_Mur2 LINE L1 3947 4826 -1051 1 620 4661 100 39 16 chrX 4700423 4701198 -161949098 - L1_Mur2 LINE L1 -258 5619 4827 1 620 269 161 18 0 chrX 4701705 4701761 -161948535 - MERVL_2A-int LTR ERVL -3496 2265 2209 1 620 2059 202 77 2 chrX 4701798 4702240 -161948056 + MERVL_2A-int LTR ERVL 3130 3604 -2157 1 620 27795 102 33 13 chrX 4702240 4704723 -161945573 + L1Md_F2 LINE L1 951 3476 -2407 1 620 297 51 0 0 chrX 4704723 4704762 -161945534 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 1 620 27795 102 39 14 chrX 4704762 4705529 -161944767 + L1Md_F2 LINE L1 3477 4350 -1533 1 620 3329 26 15 0 chrX 4705529 4705919 -161944377 - MTA_Mm LTR MaLR 0 396 1 1 620 27795 104 39 11 chrX 4705919 4707899 -161942397 + L1Md_F2 LINE L1 4351 6320 -262 1 620 716 123 33 46 chrX 4707911 4708064 -161942232 + L1Md_F2 LINE L1 6430 6580 -4 1 620 596 278 75 110 chrX 4708266 4708745 -161941551 + L1VL1 LINE L1 4 395 -6027 1 620 492 225 50 14 chrX 4708751 4708929 -161941367 + L1_Mus1 LINE L1 527 820 -5799 1 620 4521 140 14 31 chrX 4708933 4710224 -161940072 + L1_Mus1 LINE L1 747 2016 -1901 1 620 23679 23 2 0 chrX 4710224 4713144 -161937152 + L1Md_T LINE L1 2661 5586 -297 1 620 8385 36 0 0 chrX 4713144 4714137 -161936159 + L1Md_T LINE L1 5587 6579 -3 1 620 323 0 0 0 chrX 4714137 4714183 -161936113 + L1Md_T LINE L1 6537 6582 0 1 77 21735 128 13 8 chrX 4714183 4718779 -161931517 + L1_Mus1 LINE L1 1954 6657 0 1 621 6584 113 12 3 chrX 4718788 4720246 -161930050 + L1_Mus2 LINE L1 5092 6565 -1 1 621 788 188 112 14 chrX 4720264 4720550 -161929746 + L1_Mur3 LINE L1 3073 3386 -2494 1 621 4995 195 40 50 chrX 4720556 4721889 -161928407 + L1_Mur3 LINE L1 4418 5736 -144 1 621 707 345 68 19 chrX 4723060 4723544 -161926752 - Lx8 LINE L1 -236 7237 6730 1 621 1432 304 77 21 chrX 4723559 4724130 -161926166 - Lx8 LINE L1 -800 6673 6071 1 621 660 284 8 45 chrX 4724478 4724836 -161925460 + RMER19A LTR ERVK 1 259 -478 1 621 384 22 0 0 chrX 4725044 4725089 -161925207 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 621 386 284 0 61 chrX 4725442 4725607 -161924689 + GA-rich Low_complexity Low_complexity 4 158 0 1 621 772 250 53 26 chrX 4728192 4728418 -161921878 - MTE2a LTR MaLR -120 259 28 1 621 430 282 63 7 chrX 4728426 4728569 -161921727 - MTE2a-int LTR MaLR -6 1574 1424 1 621 743 181 61 24 chrX 4728570 4728734 -161921562 - L1_Mur3 LINE L1 -1120 4760 4591 1 621 29 0 0 0 chrX 4731006 4731035 -161919261 + AT_rich Low_complexity Low_complexity 1 29 0 1 621 14599 129 10 11 chrX 4731068 4734160 -161916136 - L1_Mus3 LINE L1 -18 6620 3531 1 621 949 118 0 7 chrX 4734154 4734299 -161915997 - L1_Mus3 LINE L1 -3499 2384 2241 1 621 478 308 25 16 chrX 4734777 4735021 -161915275 + RLTR15 LTR ERVK 3 248 -111 1 621 1505 229 40 0 chrX 4735121 4735448 -161914848 + ORR1B1 LTR MaLR 14 353 -41 1 621 432 202 0 179 chrX 4735448 4735612 -161914684 + B1_Mus2 SINE Alu 1 134 -13 1 621 242 197 14 27 chrX 4735619 4735692 -161914604 + (CAGAGA)n Simple_repeat Simple_repeat 4 75 0 1 621 552 42 0 0 chrX 4735692 4735763 -161914533 + (TC)n Simple_repeat Simple_repeat 2 72 0 1 621 210 37 0 0 chrX 4735765 4735792 -161914504 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 621 3988 145 5 21 chrX 4735806 4736477 -161913819 + L1_Mus3 LINE L1 5976 6635 -3 1 621 353 339 40 35 chrX 4737012 4737186 -161913110 - MTEa LTR MaLR 0 379 205 1 621 204 67 0 0 chrX 4737208 4737238 -161913058 + (A)n Simple_repeat Simple_repeat 1 30 0 1 621 349 263 0 0 chrX 4737251 4737327 -161912969 + RSINE1 SINE B4 5 80 -85 2 621 263 182 115 115 chrX 4737401 4737488 -161912808 - MTEa LTR MaLR -226 133 47 1 621 4509 10 2 0 chrX 4737544 4738036 -161912260 - MT2_Mm LTR ERVL 0 493 1 2 621 321 0 0 0 chrX 4738036 4738074 -161912222 - MERVL-int LTR ERVL 0 5485 5448 2 621 317 191 46 35 chrX 4738074 4738161 -161912135 - MTEa-int LTR MaLR -1323 640 553 1 621 48269 16 6 0 chrX 4738161 4743487 -161906809 - MERVL-int LTR ERVL -125 5360 1 2 621 4483 12 2 0 chrX 4743487 4743979 -161906317 - MT2_Mm LTR ERVL 0 493 1 2 621 519 69 0 0 chrX 4744421 4744493 -161905803 + (TTCC)n Simple_repeat Simple_repeat 3 74 0 2 621 22542 158 7 47 chrX 4745048 4749572 -161900724 - L1_Mus3 LINE L1 -671 5967 1637 2 621 7422 87 6 2 chrX 4749572 4750908 -161899388 - L1Md_F2 LINE L1 -12 6570 5228 2 621 5753 99 6 1 chrX 4750905 4751707 -161898589 + L1_Mm LINE L1 4814 5619 -264 2 621 1968 133 0 0 chrX 4760459 4760752 -161889544 - L1_Mus4 LINE L1 -14 6622 6330 2 621 258 32 0 0 chrX 4763991 4764022 -161886274 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 621 3637 133 143 115 chrX 4768449 4768930 -161881366 + RMER17A2 LTR ERVK 1 445 -461 2 621 813 65 0 0 chrX 4768930 4769038 -161881258 + (TC)n Simple_repeat Simple_repeat 1 108 0 2 621 3637 133 143 115 chrX 4769038 4769437 -161880859 + RMER17A2 LTR ERVK 446 905 -1 2 621 603 167 0 0 chrX 4769608 4769716 -161880580 - ORR1B2 LTR MaLR -259 108 1 2 621 253 159 0 0 chrX 4769716 4769760 -161880536 - RLTR14-int LTR ERV1 -4839 478 435 2 621 1070 167 206 21 chrX 4769858 4770140 -161880156 + RLTR33 LTR ERVK 177 510 -168 2 621 1884 84 11 11 chrX 4770157 4770444 -161879852 + ORR1A4 LTR MaLR 1 287 -42 2 621 258 214 0 0 chrX 4772250 4772306 -161877990 + ORR1A4 LTR MaLR 274 329 0 2 621 3911 158 35 45 chrX 4772306 4772859 -161877437 + ORR1A4-int LTR MaLR 1 567 -1396 2 621 180 0 0 0 chrX 4772859 4772879 -161877417 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 621 3911 158 35 45 chrX 4772879 4773160 -161877136 + ORR1A4-int LTR MaLR 568 826 -1137 2 621 1286 156 68 64 chrX 4772923 4773177 -161877119 + MT2B LTR ERVL 5 259 -342 2 621 317 193 35 0 chrX 4773177 4773234 -161877062 + PB1D9 SINE Alu 3 61 -59 2 621 2839 45 0 3 chrX 4773234 4773572 -161876724 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 621 45229 17 11 3 chrX 4773572 4779957 -161870339 + IAPEz-int LTR ERVK 8 6472 -9 2 621 2843 39 0 3 chrX 4779966 4780304 -161869992 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 621 303 246 68 14 chrX 4780304 4780368 -161869928 + B1_Mus2 SINE Alu 56 124 -23 2 621 4492 154 20 7 chrX 4780368 4781069 -161869227 + ORR1A4-int LTR MaLR 784 1558 -405 2 621 10758 96 19 3 chrX 4781069 4783372 -161866924 + L1Md_F LINE L1 536 2877 -3006 2 621 1807 60 4 8 chrX 4783368 4783619 -161866677 + L1Md_F2 LINE L1 5337 5586 -297 2 621 7280 87 1 5 chrX 4783620 4784616 -161865680 + L1Md_F2 LINE L1 5589 6580 -2 2 621 985 219 4 84 chrX 4784616 4784865 -161865431 + ORR1A4-int LTR MaLR 1543 1771 -192 2 621 325 213 0 0 chrX 4784861 4784922 -161865374 + ORR1A4 LTR MaLR 261 321 -8 2 621 1182 219 24 54 chrX 4785157 4785490 -161864806 - RLTR14-int LTR ERV1 -4994 323 1 2 621 1816 173 73 3 chrX 4785492 4785846 -161864450 - RLTR14 LTR ERV1 -2 380 2 2 621 660 211 0 0 chrX 4786046 4786169 -161864127 - ORR1C1 LTR MaLR 0 378 256 2 621 2634 62 0 6 chrX 4786171 4786510 -161863786 + IAPLTR4 LTR ERVK 1 337 -8 2 621 443 188 9 38 chrX 4786517 4786622 -161863674 + IAPLTR3-int LTR ERVK 16 117 -6704 2 621 391 93 22 126 chrX 4786622 4786757 -161863539 + IAPLTR3-int LTR ERVK 834 954 -5867 2 621 330 144 0 111 chrX 4786747 4786864 -161863432 + IAPLTR3-int LTR ERVK 849 952 -6629 2 621 1175 212 108 46 chrX 4786985 4787468 -161862828 + ETnERV3-int LTR ERVK 255 668 -5469 2 621 432 175 92 0 chrX 4787466 4787586 -161862710 + ETnERV3-int LTR ERVK 1719 1849 -5557 2 621 272 221 0 68 chrX 4787615 4787688 -161862608 + ETnERV3-int LTR ERVK 2471 2538 -4868 2 621 5964 129 70 3 chrX 4787701 4789063 -161861233 + ETnERV3-int LTR ERVK 2735 4271 -3135 2 621 515 187 12 0 chrX 4789065 4789184 -161861112 + ETnERV3-int LTR ERVK 2357 2464 -2380 2 621 739 78 0 0 chrX 4789201 4789303 -161860993 + IAPLTR3-int LTR ERVK 4530 4631 -2950 2 621 872 213 9 6 chrX 4789453 4789673 -161860623 + IAPLTR3-int LTR ERVK 4925 5302 -2279 2 621 317 283 0 0 chrX 4789672 4789764 -161860532 + IAPLTR3-int LTR ERVK 5416 5507 -974 2 621 607 271 32 43 chrX 4790017 4790298 -161859998 + IAPLTR3-int LTR ERVK 5466 5743 -799 2 621 5668 195 3 7 chrX 4790629 4791685 -161858611 + IAPLTR3-int LTR ERVK 5750 6801 -20 2 621 2642 56 0 6 chrX 4791685 4792024 -161858272 + IAPLTR4 LTR ERVK 1 337 -8 2 621 1250 199 36 68 chrX 4792013 4792294 -161858002 - ORR1C1 LTR MaLR -104 274 3 2 621 1033 58 73 0 chrX 4792514 4792651 -161857645 + B1_Mm SINE Alu 1 147 0 2 621 198 103 0 0 chrX 4792651 4792680 -161857616 + (A)n Simple_repeat Simple_repeat 1 29 0 2 621 6613 100 9 12 chrX 4792854 4794410 -161855886 - L1_Mus2 LINE L1 -1 6565 5016 2 621 706 147 178 35 chrX 4794608 4794777 -161855519 + B2_Mm2 SINE B2 1 193 -2 2 621 239 258 32 0 chrX 4794837 4794899 -161855397 - ID_B1 SINE B4 0 224 161 2 621 670 300 17 62 chrX 4794988 4795276 -161855020 - LTR55 LTR ERV -270 278 4 2 621 915 290 67 56 chrX 4796187 4796578 -161853718 + LTR55 LTR ERV 5 399 -149 2 621 354 251 140 25 chrX 4797391 4797591 -161852705 - L1M2 LINE L1 -2882 3261 3039 2 621 441 0 0 0 chrX 4797716 4797765 -161852531 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 621 209 33 33 0 chrX 4797766 4797796 -161852500 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 621 314 175 16 16 chrX 4797929 4797993 -161852303 - Lx8 LINE L1 -315 7158 7095 2 621 307 175 18 0 chrX 4798004 4798061 -161852235 - LTRIS_Mus LTR ERV1 -266 321 264 2 621 1538 252 64 13 chrX 4798061 4798512 -161851784 - Lx8 LINE L1 -434 7039 6566 2 621 573 151 0 0 chrX 4798522 4798615 -161851681 - RMER19B LTR ERVK -12 890 798 2 621 19528 107 40 47 chrX 4798615 4798882 -161851414 + RMER16-int LTR ERVK 413 667 -4739 2 621 429 20 0 0 chrX 4798882 4798932 -161851364 + (GA)n Simple_repeat Simple_repeat 2 51 0 2 621 19528 107 40 47 chrX 4798932 4799154 -161851142 + RMER16-int LTR ERVK 668 929 -4477 2 621 4755 58 3 0 chrX 4799154 4799739 -161850557 - LTRIS_Mus LTR ERV1 0 587 1 2 621 19528 107 40 47 chrX 4799739 4802727 -161847569 + RMER16-int LTR ERVK 930 3866 -1540 2 621 6358 123 35 28 chrX 4803307 4804398 -161845898 + RMER16-int LTR ERVK 4205 5303 -103 2 621 422 147 0 0 chrX 4804505 4804580 -161845716 + RMER16-int LTR ERVK 5330 5404 -2 2 621 721 257 9 8 chrX 4804580 4804753 -161845543 + RMER16 LTR ERVK 1 259 -274 2 621 1309 96 17 0 chrX 4804907 4805085 -161845211 + B2_Mm2 SINE B2 1 181 -14 2 621 21 0 0 0 chrX 4805085 4805106 -161845190 + AT_rich Low_complexity Low_complexity 1 21 0 2 621 31983 93 9 5 chrX 4805195 4811522 -161838774 - L1Md_F2 LINE L1 -12 6570 238 2 621 926 183 168 0 chrX 4811522 4811713 -161838583 - URR1B DNA MER1_type -2 223 1 2 621 396 167 47 6 chrX 4811735 4811904 -161838392 + (TA)n Simple_repeat Simple_repeat 1 176 0 2 621 752 293 78 78 chrX 4811908 4812204 -161838092 - MT2A LTR ERVL -65 468 173 2 621 1860 159 16 86 chrX 4812259 4812631 -161837665 - ORR1B1 LTR MaLR -8 386 41 2 621 523 353 33 28 chrX 4812976 4813189 -161837107 + MER76 LTR ERVL 1 214 -477 2 621 7123 55 10 0 chrX 4813286 4814170 -161836126 - RLTR13B1 LTR ERVK 0 893 1 2 621 246 254 0 48 chrX 4814545 4814607 -161835689 + ID4 SINE ID 2 60 -23 2 621 28865 87 5 6 chrX 4815458 4820505 -161829791 + L1Md_Gf LINE L1 278 5415 -471 2 621 3306 58 74 0 chrX 4820505 4820967 -161829329 + L1Md_F2 LINE L1 5091 5586 -297 2 621 7646 68 3 2 chrX 4820967 4821960 -161828336 + L1Md_F2 LINE L1 5587 6580 -2 2 621 342 0 0 0 chrX 4822019 4822057 -161828239 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 2 621 538 183 140 36 chrX 4822457 4822650 -161827646 + Lx9 LINE L1 7423 7635 -9 2 621 529 275 0 8 chrX 4822933 4823054 -161827242 - B1F SINE Alu -1 148 29 2 621 287 314 11 44 chrX 4823079 4823169 -161827127 - MLT1-int LTR MaLR -346 1025 939 2 621 393 271 61 54 chrX 4823194 4823471 -161826825 + L1M4 LINE L1 5511 5789 -395 2 621 492 148 198 0 chrX 4823639 4823740 -161826556 - ORR1B2 LTR MaLR -246 121 1 2 621 800 253 21 109 chrX 4823782 4824128 -161826168 + Lx7 LINE L1 7235 7557 -139 2 621 1122 63 7 0 chrX 4824128 4824270 -161826026 - B1_Mm SINE Alu 0 147 5 2 621 800 253 21 109 chrX 4824270 4824407 -161825889 + Lx7 LINE L1 7558 7675 -21 2 621 600 190 125 25 chrX 4824413 4824650 -161825646 + ORR1D2-int LTR MaLR 1197 1563 -17 2 621 616 272 65 5 chrX 4824663 4824848 -161825448 + ORR1D2 LTR MaLR 158 353 -17 2 621 210 37 0 0 chrX 4824893 4824920 -161825376 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 2 621 310 93 164 18 chrX 4825126 4825181 -161825115 + RMER10B LTR ERVL 1 63 -335 2 621 311 234 55 27 chrX 4825404 4825514 -161824782 + RMER17C-int LTR ERVK 2982 3094 -144 2 621 1374 159 75 117 chrX 4825580 4826008 -161824288 - RMER17C LTR ERVK 0 410 1 2 621 1451 180 182 6 chrX 4826023 4826358 -161823938 + RMER10B LTR ERVL 5 398 0 2 621 284 313 40 0 chrX 4826363 4826462 -161823834 - HERVL40-int LTR ERVL -2041 3489 3387 2 621 1111 173 4 96 chrX 4826623 4826872 -161823424 - URR1A DNA MER1_type 0 226 1 2 621 29 0 0 0 chrX 4827855 4827884 -161822412 + AT_rich Low_complexity Low_complexity 1 29 0 2 621 763 192 20 0 chrX 4828124 4828270 -161822026 - B1_Mur4 SINE Alu -1 149 1 2 621 401 78 130 0 chrX 4828546 4828623 -161821673 + ORR1A2 LTR MaLR 1 87 -240 2 621 1820 122 250 0 chrX 4828625 4828953 -161821343 - ORR1A2-int LTR MaLR -535 1428 1019 2 621 4200 184 78 18 chrX 4829348 4829925 -161820371 - ORR1A2-int LTR MaLR -936 1027 386 2 621 2755 78 7 86 chrX 4829925 4830165 -161820131 - MTB LTR MaLR 0 400 183 2 621 1144 68 0 0 chrX 4830165 4830311 -161819985 - B1_Mm SINE Alu 0 147 2 2 621 2755 78 7 86 chrX 4830311 4830503 -161819793 - MTB LTR MaLR -218 182 2 2 621 4200 184 78 18 chrX 4830503 4830893 -161819403 - ORR1A2-int LTR MaLR -1578 385 1 2 621 2125 132 25 0 chrX 4830893 4831212 -161819084 - ORR1A2 LTR MaLR 0 327 1 2 621 1654 138 11 0 chrX 4831212 4831487 -161818809 + ORR1A2-int LTR MaLR 1686 1963 0 2 621 1988 147 3 58 chrX 4831487 4831833 -161818463 + ORR1A2 LTR MaLR 1 327 0 2 621 336 363 58 59 chrX 4832050 4832679 -161817617 + L2a LINE L2 2791 3386 -40 2 621 2728 215 44 36 chrX 4832952 4833305 -161816991 - RMER6D LTR ERVK 0 720 364 2 621 300 91 0 0 chrX 4833305 4833349 -161816947 + (CCA)n Simple_repeat Simple_repeat 3 46 0 2 621 2728 215 44 36 chrX 4833349 4833406 -161816890 - RMER6D LTR ERVK -357 363 315 2 621 1956 151 69 6 chrX 4833406 4833752 -161816544 + RLTR9A LTR ERVK 1 368 0 2 621 2728 215 44 36 chrX 4833752 4834039 -161816257 - RMER6D LTR ERVK -406 314 16 2 621 307 93 0 0 chrX 4834065 4834108 -161816188 + L1_Mur2 LINE L1 151 193 -6519 2 621 323 68 0 0 chrX 4834125 4834169 -161816127 + RLTR1 LTR ERV1 581 624 0 2 621 2149 196 44 2 chrX 4834169 4834625 -161815671 + L1_Mur2 LINE L1 410 884 -6202 2 621 1250 88 17 0 chrX 4834644 4834825 -161815471 - RLTR45 LTR ERVK -298 184 1 2 621 7717 53 1 3 chrX 4834825 4835739 -161814557 - RLTR45-int LTR ERVK 0 7244 6333 2 621 1949 87 13 3 chrX 4835739 4836038 -161814258 - RLTR13B1 LTR ERVK -385 508 207 2 621 8393 44 1 10 chrX 4836060 4837077 -161813219 - RLTR45-int LTR ERVK -1172 6072 5065 2 621 3911 98 28 28 chrX 4837070 4837677 -161812619 - RLTR45-int LTR ERVK -3258 3986 3380 2 621 12032 39 47 3 chrX 4837647 4839453 -161810843 - RLTR45-int LTR ERVK -4032 3212 1329 2 621 1143 58 0 0 chrX 4840249 4840387 -161809909 - RLTR45-int LTR ERVK -6426 818 681 2 621 4412 75 107 17 chrX 4840685 4841320 -161808976 - RLTR45-int LTR ERVK -6552 692 1 2 621 3648 64 30 2 chrX 4841320 4841789 -161808507 - RLTR45 LTR ERVK 0 482 1 2 621 2055 115 334 9 chrX 4841789 4842445 -161807851 + L1_Mur2 LINE L1 878 1746 -4131 2 621 8687 136 37 20 chrX 4842415 4843140 -161807156 + L1_Mur2 LINE L1 2140 2850 -3027 2 621 2044 179 49 7 chrX 4843140 4843567 -161806729 - BGLII_A LTR ERVK 0 445 1 2 621 8687 136 37 20 chrX 4843567 4844413 -161805883 + L1_Mur2 LINE L1 2851 3736 -2141 2 621 1659 227 44 10 chrX 4844806 4845277 -161805019 + L1VL4 LINE L1 521 988 -5347 2 621 2120 110 3 0 chrX 4845277 4845585 -161804711 + L1_Mus1 LINE L1 6259 6567 0 2 621 4147 182 43 12 chrX 4845591 4846443 -161803853 + Lx4A LINE L1 1426 2304 -3582 2 621 1906 274 63 50 chrX 4846445 4847079 -161803217 + RLTR26 LTR ERVK 1 642 0 2 621 10946 173 244 11 chrX 4847082 4847232 -161803064 + Lx4A LINE L1 2295 2442 -3435 2 621 2888 94 5 2 chrX 4847232 4847627 -161802669 + MTA_Mm LTR MaLR 1 396 0 2 621 10946 173 244 11 chrX 4847627 4849421 -161800875 + Lx4A LINE L1 2443 4251 -1626 2 621 1229 128 0 5 chrX 4849421 4849610 -161800686 + B2_Mm2 SINE B2 1 188 -7 2 77 10946 177 234 11 chrX 4849610 4850476 -161799820 + Lx4A LINE L1 4252 5875 -1183 2 622 2717 208 36 7 chrX 4850469 4851017 -161799279 + Lx4A LINE L1 6493 7056 -2 2 622 25 0 0 0 chrX 4851017 4851042 -161799254 + AT_rich Low_complexity Low_complexity 1 25 0 2 622 3661 225 43 15 chrX 4851664 4852523 -161797773 - RMER19B LTR ERVK -19 883 1 2 622 1892 130 246 25 chrX 4855842 4856237 -161794059 + RLTR45 LTR ERVK 1 482 0 2 622 2104 123 17 74 chrX 4856482 4856887 -161793409 - MT2B LTR ERVL -28 573 192 3 622 1136 83 7 0 chrX 4856919 4857064 -161793232 - B1_Mus2 SINE Alu 0 147 2 3 622 243 243 14 0 chrX 4857534 4857608 -161792688 + RSINE1 SINE B4 55 129 -36 3 622 398 219 31 20 chrX 4857686 4857784 -161792512 - RLTR23 LTR ERV1 0 430 332 3 622 310 329 38 31 chrX 4858162 4858322 -161791974 - Lx9 LINE L1 -218 7426 7266 3 622 1148 193 98 0 chrX 4858370 4858675 -161791621 - Lx9 LINE L1 -1 7643 7309 3 622 2343 151 56 12 chrX 4858676 4859105 -161791191 + RLTR11B LTR ERVK 3 450 -3 3 622 444 174 22 55 chrX 4859107 4859198 -161791098 - Lx9 LINE L1 -427 7217 7130 3 622 1254 151 28 28 chrX 4859197 4859408 -161790888 + Lx9 LINE L1 6810 7020 -624 3 622 689 156 78 0 chrX 4859451 4859579 -161790717 + B1_Mur2 SINE Alu 12 149 0 3 622 563 186 16 41 chrX 4859775 4859898 -161790398 - PB1D9 SINE Alu 0 120 1 3 622 198 0 0 0 chrX 4859979 4860001 -161790295 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 3 622 830 116 14 7 chrX 4860001 4860148 -161790148 - Lx LINE L1 -1 7057 6910 3 622 858 92 14 0 chrX 4860236 4860378 -161789918 - Lx LINE L1 0 6654 6511 3 622 1264 297 63 48 chrX 4860990 4861083 -161789213 - Lx7 LINE L1 -1384 6312 6209 3 622 1220 136 0 37 chrX 4861083 4861297 -161788999 + Lx2 LINE L1 6792 6997 0 3 622 1264 297 63 48 chrX 4861297 4861355 -161788941 - Lx7 LINE L1 -1488 6208 6160 3 622 2827 91 125 9 chrX 4861355 4861787 -161788509 - RLTR45 LTR ERVK 0 482 1 3 622 1264 297 63 48 chrX 4861787 4862239 -161788057 - Lx7 LINE L1 -1537 6159 5699 3 622 975 123 0 0 chrX 4862241 4862395 -161787901 + (TTTC)n Simple_repeat Simple_repeat 3 156 0 3 622 1027 83 45 0 chrX 4862397 4862530 -161787766 - B1_Mm SINE Alu -6 141 3 3 622 295 230 138 0 chrX 4862563 4862650 -161787646 - B1_Mur2 SINE Alu -2 147 49 3 622 757 303 42 122 chrX 4862655 4863271 -161787025 + RLTR18 LTR ERVK 3 569 -47 3 622 244 274 0 0 chrX 4863308 4863372 -161786924 - B1_Mus1 SINE Alu -85 64 1 3 622 835 292 70 38 chrX 4863373 4863631 -161786665 - Lx8 LINE L1 -485 6988 6721 3 622 1707 169 127 95 chrX 4863631 4864063 -161786233 + RLTR41 LTR ERV1 1 446 0 3 622 835 292 70 38 chrX 4864063 4864118 -161786178 - Lx8 LINE L1 -753 6720 6667 3 622 1641 185 31 116 chrX 4864118 4864600 -161785696 + RMER10A LTR ERVL 2 442 0 3 622 835 292 70 38 chrX 4864600 4864658 -161785638 - Lx8 LINE L1 -807 6666 6604 3 622 1466 165 98 96 chrX 4864668 4865113 -161785183 - RMER16 LTR ERVK 0 533 1 3 622 986 288 54 37 chrX 4865122 4865509 -161784787 - Lx8 LINE L1 -900 6573 6192 3 622 225 0 0 0 chrX 4865509 4865534 -161784762 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 622 986 288 54 37 chrX 4865534 4865575 -161784721 - Lx8 LINE L1 -1282 6191 6138 3 622 651 107 48 16 chrX 4865578 4865702 -161784594 - L1Md_F2 LINE L1 -5 6577 6450 3 622 4497 137 13 28 chrX 4865703 4866648 -161783648 + L1Md_A LINE L1 498 1423 -4460 3 622 225 281 0 0 chrX 4866681 4866738 -161783558 + Lx9 LINE L1 7201 7257 -387 3 622 951 58 1 0 chrX 4866725 4866850 -161783446 - L1_Mus4 LINE L1 -368 5815 5658 3 622 2020 113 235 45 chrX 4866850 4867313 -161782983 - RLTR6_Mm LTR ERV1 -67 587 37 3 622 68095 18 13 1 chrX 4867422 4875109 -161775187 - RLTR6-int LTR ERV1 0 7778 1 3 622 2108 115 227 44 chrX 4875109 4875590 -161774706 - RLTR6_Mm LTR ERV1 -49 605 37 3 622 12508 91 1 11 chrX 4875699 4877436 -161772860 - L1_Mus4 LINE L1 -225 5658 3940 3 622 18932 100 3 2 chrX 4877428 4880252 -161770044 + L1Md_A LINE L1 1122 3946 -1937 3 622 967 233 51 91 chrX 4880254 4880376 -161769920 - ORR1D2-int LTR MaLR -749 621 472 3 622 2061 154 67 6 chrX 4880376 4880722 -161769574 - ORR1B2 LTR MaLR 0 367 1 3 622 1249 266 42 40 chrX 4880722 4880942 -161769354 - ORR1D2-int LTR MaLR -1038 471 230 3 622 600 200 158 158 chrX 4880942 4881352 -161768944 + RMER17C LTR ERVK 1 410 0 3 622 1249 261 35 42 chrX 4881352 4881589 -161768707 - ORR1D2-int LTR MaLR -1138 232 1 3 622 1165 269 56 25 chrX 4881589 4881948 -161768348 - ORR1D2 LTR MaLR 0 370 1 3 622 2933 280 89 51 chrX 4882067 4882396 -161767900 - Lx8 LINE L1 -2 7471 7123 3 622 753 12 0 0 chrX 4882396 4882482 -161767814 + (TTTC)n Simple_repeat Simple_repeat 2 87 0 3 622 2933 280 89 51 chrX 4882482 4882517 -161767779 - Lx8 LINE L1 -351 7122 7120 3 622 1122 83 0 0 chrX 4882517 4882662 -161767634 - B1_Mus2 SINE Alu -2 145 1 3 622 2933 280 89 51 chrX 4882662 4883214 -161767082 - Lx8 LINE L1 -354 7119 6511 3 622 393 22 0 0 chrX 4883214 4883260 -161767036 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 622 2933 280 89 51 chrX 4883260 4883594 -161766702 - Lx8 LINE L1 -963 6510 6173 3 622 216 0 0 0 chrX 4883594 4883618 -161766678 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 622 325 95 0 31 chrX 4883617 4883682 -161766614 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 622 595 256 182 42 chrX 4883701 4884080 -161766216 - L1M2 LINE L1 -1328 4815 4384 3 622 14115 100 64 11 chrX 4884144 4887574 -161762722 - MuRRS4-int LTR ERV1 -1274 3789 180 3 622 2488 143 7 17 chrX 4887664 4888077 -161762219 - RLTR9E LTR ERVK 0 409 1 3 622 520 93 0 26 chrX 4888077 4888154 -161762142 - ETnERV2-int LTR ERVK -1 7405 7331 3 622 21312 151 23 43 chrX 4888365 4889117 -161761179 - ETnERV2-int LTR ERVK -1185 6221 5780 3 622 1374 99 16 0 chrX 4889117 4889299 -161760997 - B2_Mm1t SINE B2 -8 185 1 3 622 21312 112 28 22 chrX 4889299 4891947 -161758349 - ETnERV2-int LTR ERVK -1627 5779 3057 3 622 576 259 52 40 chrX 4891927 4892100 -161758196 - ETnERV2-int LTR ERVK -4778 2628 2454 3 622 666 157 26 9 chrX 4892117 4892233 -161758063 - RMER16-int LTR ERVK -4200 1206 1089 3 622 294 111 0 0 chrX 4892308 4892353 -161757943 - RMER16-int LTR ERVK -5218 188 144 3 622 331 100 0 20 chrX 4892803 4892854 -161757442 - ETnERV2-int LTR ERVK -5104 2140 2091 3 622 728 220 25 84 chrX 4892849 4893169 -161757127 - MMETn-int LTR ERVK -2942 372 10 3 622 2460 147 17 22 chrX 4893178 4893589 -161756707 - RLTR9E LTR ERVK 0 409 1 3 622 1736 168 42 34 chrX 4893716 4894097 -161756199 - LTRIS4 LTR ERV1 0 507 124 3 622 200 61 61 0 chrX 4894388 4894421 -161755875 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 622 3091 111 75 2 chrX 4894707 4895203 -161755093 + RLTR47_MM LTR ERV1 1 532 0 3 622 1299 226 60 6 chrX 4895203 4895532 -161754764 + ORR1B1-int LTR MaLR 325 728 -852 3 622 901 250 57 9 chrX 4895536 4895746 -161754550 - RLTR41 LTR ERV1 0 446 227 3 622 16859 161 25 25 chrX 4896205 4898137 -161752159 + L1VL2 LINE L1 361 2277 -3606 3 622 2809 73 6 6 chrX 4898137 4898483 -161751813 - ORR1A1 LTR MaLR 0 346 1 3 622 16859 152 19 24 chrX 4898483 4900477 -161749819 + L1VL2 LINE L1 2278 4278 -1605 3 622 948 84 27 0 chrX 4900476 4900631 -161749665 - L1Md_Gf LINE L1 -4299 1587 1419 3 622 38777 31 0 0 chrX 4900657 4907052 -161743244 - L1Md_T LINE L1 0 6585 94 3 622 1885 90 1 0 chrX 4907050 4907624 -161742672 - L1Md_Gf LINE L1 -4430 1456 828 3 622 34357 29 1 0 chrX 4907620 4911665 -161738631 + L1Md_T LINE L1 1541 5586 -297 3 622 8532 56 0 0 chrX 4911665 4912661 -161737635 + L1Md_T LINE L1 5587 6582 0 3 622 2064 150 15 9 chrX 4912662 4913005 -161737291 + L1_Mur2 LINE L1 4271 4615 -1262 3 622 6857 113 12 2 chrX 4913012 4914120 -161736176 + L1_Mus3 LINE L1 5515 6638 0 3 622 388 133 35 26 chrX 4914734 4914850 -161735446 + (TA)n Simple_repeat Simple_repeat 1 117 0 3 622 243 79 0 0 chrX 4915703 4915741 -161734555 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 3 622 4143 221 42 13 chrX 4918896 4919772 -161730524 + RMER19B LTR ERVK 1 902 0 3 622 24 0 0 0 chrX 4920389 4920413 -161729883 + AT_rich Low_complexity Low_complexity 1 24 0 3 622 2885 192 30 13 chrX 4920413 4920947 -161729349 - Lx4A LINE L1 -1 7057 6515 3 622 6588 225 122 65 chrX 4920955 4921766 -161728530 - L1VL4 LINE L1 -388 5792 4928 3 622 1004 146 0 0 chrX 4921766 4921903 -161728393 + B1_Mus2 SINE Alu 5 141 -6 3 622 348 24 0 0 chrX 4921910 4921951 -161728345 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 3 622 6588 220 127 68 chrX 4921951 4922029 -161728267 - L1VL4 LINE L1 -950 4927 4829 3 622 1418 107 0 5 chrX 4922029 4922217 -161728079 - B2_Mm2 SINE B2 -8 187 1 3 622 6588 220 127 68 chrX 4922217 4924340 -161725956 - L1VL4 LINE L1 -1049 4828 2558 3 622 435 38 0 0 chrX 4924341 4924394 -161725902 + (T)n Simple_repeat Simple_repeat 1 53 0 3 622 204 40 0 0 chrX 4924806 4924831 -161725465 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 3 622 35520 74 5 3 chrX 4924836 4931102 -161719194 - L1Md_F2 LINE L1 -14 6571 199 3 622 1427 141 15 12 chrX 4931104 4931363 -161718933 - L1VL4 LINE L1 -3319 2567 2308 3 622 2070 272 67 52 chrX 4931370 4932002 -161718294 - RLTR26 LTR ERVK 0 642 2 3 622 4430 192 77 9 chrX 4932005 4932836 -161717460 - L1VL4 LINE L1 -3582 2304 1411 3 622 2356 96 3 0 chrX 4932836 4933148 -161717148 - L1_Mus1 LINE L1 0 6567 6255 3 622 4430 218 58 5 chrX 4933148 4933671 -161716625 - L1VL4 LINE L1 -4476 1410 859 3 622 9621 119 285 19 chrX 4934107 4935016 -161715280 - L1_Mur2 LINE L1 -2107 3770 2851 3 622 2078 192 57 2 chrX 4935016 4935438 -161714858 + BGLII_A LTR ERVK 1 445 0 3 622 9621 133 227 12 chrX 4935438 4937276 -161713020 - L1_Mur2 LINE L1 -3027 2850 388 3 622 2928 223 38 52 chrX 4937302 4937589 -161712707 + RMER6D LTR ERVK 16 311 -409 3 622 2108 125 92 3 chrX 4937589 4937927 -161712369 - RLTR9A LTR ERVK 0 368 1 3 622 2928 223 38 52 chrX 4937927 4937985 -161712311 + RMER6D LTR ERVK 312 362 -358 3 622 387 0 0 0 chrX 4937985 4938028 -161712268 + (TGG)n Simple_repeat Simple_repeat 2 44 0 3 622 2928 223 38 52 chrX 4938028 4938396 -161711900 + RMER6D LTR ERVK 363 720 0 3 622 289 354 69 67 chrX 4938684 4939272 -161711024 - L2a LINE L2 -40 3386 2796 3 622 23 33 0 0 chrX 4939316 4939346 -161710950 + AT_rich Low_complexity Low_complexity 1 30 0 3 622 1745 135 101 39 chrX 4940048 4940386 -161709910 - ORR1B2 LTR MaLR -8 359 1 3 622 636 227 35 0 chrX 4941175 4941316 -161708980 + B1_Mur1 SINE Alu 2 147 -2 3 622 3609 134 80 12 chrX 4941406 4941525 -161708771 - Lx LINE L1 0 6654 6536 3 622 204 40 0 0 chrX 4941525 4941550 -161708746 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 3 622 3609 134 80 12 chrX 4941550 4942027 -161708269 - Lx LINE L1 -119 6535 6019 3 622 1938 182 0 9 chrX 4942027 4942355 -161707941 - ORR1A3 LTR MaLR -1 325 1 3 622 4831 130 39 5 chrX 4942355 4943128 -161707168 - ORR1A3-int LTR MaLR 0 1963 1165 3 622 4607 14 0 0 chrX 4943131 4943613 -161706683 + LTRIS_Mm LTR ERV1 1 482 0 3 622 3258 24 3 0 chrX 4943613 4943989 -161706307 + MuRRS-int LTR ERV1 1 377 -4313 3 622 22043 25 5 6 chrX 4944015 4946696 -161703600 + MuRRS-int LTR ERV1 599 3277 -1413 3 622 11374 40 0 4 chrX 4946728 4948152 -161702144 + MuRRS-int LTR ERV1 3273 4690 0 3 622 4276 21 0 0 chrX 4948152 4948634 -161701662 + LTRIS_Mm LTR ERV1 1 482 0 3 622 3471 165 33 26 chrX 4948634 4949735 -161700561 - ORR1A3-int LTR MaLR -795 1168 1 3 622 2108 117 29 45 chrX 4949737 4950132 -161700164 - MT2B2 LTR ERVL -2 582 155 3 622 317 333 68 27 chrX 4950132 4950280 -161700016 - RMER15 LTR ERVL 0 575 422 3 622 1987 156 13 0 chrX 4950665 4950979 -161699317 - ORR1A3 LTR MaLR -8 318 1 3 622 519 302 26 68 chrX 4951047 4951239 -161699057 - MTE2b LTR MaLR -15 364 181 3 622 1565 222 87 12 chrX 4951242 4951588 -161698708 + ORR1D1 LTR MaLR 3 374 0 3 622 680 282 28 11 chrX 4951588 4951765 -161698531 - MTE2b LTR MaLR -195 184 5 3 622 468 326 62 55 chrX 4951895 4952151 -161698145 + MER106B DNA MER1_type 1 258 -801 3 622 437 254 144 63 chrX 4952499 4952882 -161697414 + MER106B DNA MER1_type 445 858 -201 3 622 1061 109 0 0 chrX 4953336 4953483 -161696813 - B1_Mus1 SINE Alu -1 147 1 3 622 279 79 0 0 chrX 4953560 4953598 -161696698 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 622 698 332 68 0 chrX 4953665 4953870 -161696426 - B4A SINE B4 -73 219 1 3 622 748 209 198 0 chrX 4953971 4954158 -161696138 + URR1A DNA MER1_type 3 226 0 3 622 471 218 59 27 chrX 4954229 4954350 -161695946 + MTD LTR MaLR 282 405 -14 3 622 616 161 27 0 chrX 4954406 4954518 -161695778 + ORR1C2 LTR MaLR 1 115 -263 3 622 2105 93 64 73 chrX 4954523 4954881 -161695415 - RLTR10B2 LTR ERVK -10 355 1 3 622 1612 120 75 0 chrX 4954882 4955148 -161695148 + ORR1C2 LTR MaLR 95 380 -4 3 622 2980 124 12 37 chrX 4956070 4956557 -161693739 + MT2C_Mm LTR ERVL 1 475 0 3 622 527 266 42 97 chrX 4956832 4957398 -161692898 + L1_Mur3 LINE L1 894 1429 -4451 3 622 524 148 148 0 chrX 4957411 4957539 -161692757 + Lx5 LINE L1 6904 7050 0 4 622 432 0 0 0 chrX 4957587 4957635 -161692661 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 4 622 5360 100 13 54 chrX 4957652 4958548 -161691748 + RLTR13A3 LTR ERVK 119 978 0 4 622 961 136 7 0 chrX 4958578 4958725 -161691571 - B1_Mus1 SINE Alu 0 148 1 4 622 1990 221 36 55 chrX 4958727 4959440 -161690856 + L1_Mur3 LINE L1 1459 2158 -3722 3 622 6950 92 12 3 chrX 4959446 4960472 -161689824 + L1_Mus3 LINE L1 5604 6638 0 4 622 646 137 0 22 chrX 4960494 4960628 -161689668 + GA-rich Low_complexity Low_complexity 2 132 0 4 622 2692 235 44 66 chrX 4960632 4960782 -161689514 + L1_Mur3 LINE L1 3049 3187 -2693 3 622 967 137 21 57 chrX 4960782 4960975 -161689321 + B2_Mm2 SINE B2 2 187 -8 4 622 2692 235 44 66 chrX 4960975 4961396 -161688900 + L1_Mur3 LINE L1 3188 3620 -2260 3 622 6299 125 20 15 chrX 4961396 4962414 -161687882 - RLTR13D5 LTR ERVK 0 1023 1 4 622 2692 235 44 66 chrX 4962414 4962694 -161687602 + L1_Mur3 LINE L1 3621 3889 -1991 3 622 935 167 0 0 chrX 4962694 4962844 -161687452 - B1_Mur4 SINE Alu 0 150 1 4 622 2692 235 44 66 chrX 4962844 4963038 -161687258 + L1_Mur3 LINE L1 3890 4073 -1807 3 622 711 182 0 15 chrX 4963042 4963176 -161687120 + MT2B LTR ERVL 1 132 -469 4 622 786 113 0 0 chrX 4963234 4963349 -161686947 + ORR1A2 LTR MaLR 213 327 0 4 622 2363 82 0 0 chrX 4963718 4964058 -161686238 - L1_Mm LINE L1 -1354 4529 4190 4 622 5539 114 17 5 chrX 4964076 4964918 -161685378 + L1_Mus3 LINE L1 5787 6638 0 4 622 551 265 151 10 chrX 4964940 4965245 -161685051 + L1MD2 LINE L1 5638 5985 -374 4 622 22 0 0 0 chrX 4965510 4965532 -161684764 + AT_rich Low_complexity Low_complexity 1 22 0 4 622 2743 3 3 0 chrX 4965780 4966088 -161684208 - L1Md_A LINE L1 0 6582 6274 4 622 8128 10 0 0 chrX 4966088 4967093 -161683203 + L1_Mm LINE L1 1397 2401 -3482 4 622 270 0 0 0 chrX 4969148 4969178 -161681118 + (TC)n Simple_repeat Simple_repeat 2 31 0 4 622 411 38 0 0 chrX 4969182 4969235 -161681061 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 622 815 288 48 50 chrX 4969497 4969846 -161680450 - MTEa LTR MaLR 0 379 13 4 622 499 299 22 130 chrX 4969854 4969907 -161680389 - MTE-int LTR MaLR -2 1578 1532 4 622 986 147 0 20 chrX 4969907 4970060 -161680236 + B1_Mur4 SINE Alu 1 150 0 4 622 1069 200 35 5 chrX 4970062 4970263 -161680033 - B3 SINE B2 -7 209 3 4 622 499 299 22 130 chrX 4970263 4970429 -161679867 - MTE-int LTR MaLR -49 1531 1380 4 622 1203 75 0 0 chrX 4970441 4970601 -161679695 - L1_Mus2 LINE L1 0 6566 6407 4 622 644 216 17 131 chrX 4970649 4970798 -161679498 + RSINE1 SINE B4 10 146 -19 4 622 369 0 0 0 chrX 4970798 4970839 -161679457 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 622 279 0 0 0 chrX 4970839 4970869 -161679427 + (GA)n Simple_repeat Simple_repeat 1 31 0 4 622 644 216 17 131 chrX 4970869 4970894 -161679402 + RSINE1 SINE B4 147 164 -1 4 622 2734 315 65 12 chrX 4970912 4971476 -161678820 - MTE-int LTR MaLR -215 1365 767 4 622 591 15 0 0 chrX 4971476 4971544 -161678752 + (TG)n Simple_repeat Simple_repeat 2 69 0 4 622 2734 315 65 12 chrX 4971544 4971814 -161678482 - MTE-int LTR MaLR -814 766 488 4 622 2755 141 13 30 chrX 4971819 4972278 -161678018 + RMER13B LTR ERVK 1 444 -464 4 622 547 228 57 8 chrX 4972278 4972402 -161677894 - RLTR13D5 LTR ERVK 0 1023 894 4 622 854 284 121 35 chrX 4972444 4972791 -161677505 - MTEa LTR MaLR 0 379 3 4 622 22 56 0 0 chrX 4974054 4974090 -161676206 + AT_rich Low_complexity Low_complexity 1 36 0 4 622 186 133 0 0 chrX 4974290 4974320 -161675976 + (TAA)n Simple_repeat Simple_repeat 1 30 0 4 622 2210 192 492 58 chrX 4974320 4974546 -161675750 - RLTR20C LTR ERVK 0 578 256 4 622 553 121 0 0 chrX 4974546 4974645 -161675651 - Lx3_Mus LINE L1 -1 7008 6910 4 622 2210 160 46 72 chrX 4974645 4974902 -161675394 - RLTR20C LTR ERVK -279 255 4 4 622 1513 138 19 4 chrX 4975860 4976121 -161674175 - Lx2A1 LINE L1 0 7008 6744 4 622 1080 90 0 0 chrX 4976662 4976817 -161673479 - L1_Mus1 LINE L1 -737 5146 4992 4 622 4463 86 2 4 chrX 4976814 4977626 -161672670 + L1_Mus1 LINE L1 5148 5932 -635 4 622 4257 120 6 62 chrX 4977643 4978423 -161671873 + RMER17A LTR ERVK 13 749 -2 4 622 4949 58 11 3 chrX 4978423 4979061 -161671235 + L1_Mus1 LINE L1 5925 6567 0 4 622 189 0 0 0 chrX 4979091 4979112 -161671184 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 622 747 187 112 31 chrX 4979568 4979796 -161670500 - Lx4B LINE L1 -4 7054 6788 4 622 180 0 0 0 chrX 4979797 4979817 -161670479 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 4 622 1535 122 15 4 chrX 4979911 4980174 -161670122 + L1_Mur2 LINE L1 3947 4212 -1665 4 622 364 100 0 0 chrX 4980169 4980219 -161670077 - L1Md_A LINE L1 -6503 221 172 4 77 6854 14 0 0 chrX 4980213 4981029 -161669267 + L1Md_A LINE L1 4771 5586 -297 4 623 9071 2 0 0 chrX 4981029 4982025 -161668271 + L1Md_A LINE L1 5587 6582 0 4 623 3208 181 5 2 chrX 4982026 4982653 -161667643 + L1_Mur2 LINE L1 4198 4826 -1051 4 623 4752 97 39 10 chrX 4982649 4983420 -161666876 - L1_Mur2 LINE L1 -258 5619 4827 4 623 269 161 18 0 chrX 4983927 4983983 -161666313 - MERVL_2A-int LTR ERVL -3496 2265 2209 4 623 6647 220 66 10 chrX 4984020 4985587 -161664709 + MERVL_2A-int LTR ERVL 3130 4785 -976 4 623 25106 66 3 1 chrX 4985593 4989749 -161660547 - L1Md_F2 LINE L1 -12 6570 2409 4 623 1157 205 58 8 chrX 4989772 4990032 -161660264 + MERVL_2A-int LTR ERVL 4802 5074 -687 4 623 1089 215 95 92 chrX 4991078 4991447 -161658849 + ORR1D2 LTR MaLR 1 370 0 4 623 7893 36 2 1 chrX 4991649 4992736 -161657560 - L1Md_F2 LINE L1 0 6582 5536 4 623 1970 77 39 77 chrX 4992746 4993082 -161657214 - Lx LINE L1 -6 6648 6326 4 623 2277 164 128 44 chrX 4993176 4994104 -161656192 + RLTR14-int LTR ERV1 3777 4782 -535 4 623 2040 135 6 0 chrX 4994105 4994424 -161655872 + ORR1A4 LTR MaLR 1 321 -8 4 623 5292 140 39 15 chrX 4994425 4995575 -161654721 + ORR1A4-int LTR MaLR 10 1408 -555 4 623 532 215 37 9 chrX 4995575 4995683 -161654613 - RLTR33 LTR ERVK 0 678 568 4 623 2534 211 50 83 chrX 4995658 4996300 -161653996 - RLTR26 LTR ERVK -21 621 1 4 623 2781 117 242 4 chrX 4996300 4996791 -161653505 - RLTR33 LTR ERVK -70 608 1 4 623 2345 126 48 20 chrX 4996950 4997511 -161652785 + ORR1A4-int LTR MaLR 1009 1772 -191 4 623 1674 154 7 0 chrX 4997500 4997773 -161652523 + ORR1A4 LTR MaLR 5 279 -50 4 623 39 22 0 0 chrX 4997907 4997953 -161652343 + AT_rich Low_complexity Low_complexity 1 46 0 4 623 8249 112 25 28 chrX 4997953 4999539 -161650757 - Lx3B LINE L1 -6 6967 5375 4 623 231 111 28 0 chrX 4999540 4999576 -161650720 + ORR1A4 LTR MaLR 293 329 0 4 623 2263 104 29 21 chrX 4999576 4999845 -161650451 + RLTR14-int LTR ERV1 4779 5052 -265 4 623 281 24 49 0 chrX 4999845 4999886 -161650410 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 623 2263 104 29 21 chrX 4999886 5000000 -161650296 + RLTR14-int LTR ERV1 5053 5164 -153 4 623 878 132 0 44 chrX 5000000 5000159 -161650137 + RLTR14-int LTR ERV1 5166 5317 0 1 623 1538 191 39 52 chrX 5000159 5000322 -161649974 + RLTR14 LTR ERV1 1 154 -228 1 623 420 20 0 0 chrX 5000322 5000371 -161649925 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 2 623 1538 191 39 52 chrX 5000371 5000440 -161649856 + RLTR14 LTR ERV1 155 234 -148 1 623 198 0 0 0 chrX 5000440 5000462 -161649834 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 3 623 1538 191 39 52 chrX 5000462 5000614 -161649682 + RLTR14 LTR ERV1 235 380 -2 1 623 688 323 47 5 chrX 5000829 5001022 -161649274 - B3 SINE B2 -13 203 3 4 623 29 28 0 0 chrX 5001808 5001844 -161648452 + AT_rich Low_complexity Low_complexity 1 36 0 5 623 348 127 0 0 chrX 5001990 5002045 -161648251 + (TA)n Simple_repeat Simple_repeat 2 56 0 6 623 243 61 0 0 chrX 5002073 5002106 -161648190 + (GA)n Simple_repeat Simple_repeat 2 34 0 7 623 313 341 30 12 chrX 5002258 5002424 -161647872 - RMER15-int LTR ERVL -2764 2235 2067 8 623 892 232 39 19 chrX 5002438 5002645 -161647651 - B3 SINE B2 -2 214 4 9 623 390 21 0 0 chrX 5002846 5002893 -161647403 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 623 369 278 0 0 chrX 5003395 5003485 -161646811 + Lx6 LINE L1 6276 6365 -685 1 623 1277 287 78 36 chrX 5003480 5004048 -161646248 + Lx6 LINE L1 6479 7452 -8 1 623 21 0 0 0 chrX 5004210 5004231 -161646065 + AT_rich Low_complexity Low_complexity 1 21 0 1 623 1222 48 0 7 chrX 5004233 5004381 -161645915 - B1_Mm SINE Alu 0 147 1 1 623 832 116 0 294 chrX 5004757 5005039 -161645257 + RLTR23 LTR ERV1 1 199 -231 1 623 286 262 59 35 chrX 5005046 5005216 -161645080 + L1M3e LINE L1 508 681 -6349 1 623 241 203 150 61 chrX 5005243 5005390 -161644906 + RMER2 LTR ERV1 74 233 -334 1 623 248 214 153 38 chrX 5005423 5005554 -161644742 + RMER2 LTR ERV1 74 219 -348 1 623 236 252 113 53 chrX 5005561 5005712 -161644584 + RMER2 LTR ERV1 74 233 -334 1 623 1235 166 37 131 chrX 5005814 5006218 -161644078 + RLTR23 LTR ERV1 74 430 0 1 623 343 351 97 26 chrX 5007184 5007339 -161642957 + B3A SINE B2 3 168 -30 1 623 1892 172 99 38 chrX 5007476 5008140 -161642156 + RLTR14-int LTR ERV1 4610 5314 -3 2 623 1424 162 4 37 chrX 5008143 5008412 -161641884 + RLTR14 LTR ERV1 1 260 -122 2 623 635 168 96 26 chrX 5008414 5008551 -161641745 + B1_Mus1 SINE Alu 3 150 0 2 623 399 306 183 37 chrX 5008420 5008570 -161641726 + MT2A LTR ERVL 175 353 -248 2 623 1380 69 15 36 chrX 5008570 5008765 -161641531 + B2_Mm2 SINE B2 1 191 -4 2 623 435 269 147 30 chrX 5008765 5008969 -161641327 + MT2A LTR ERVL 348 574 -27 2 623 205 263 0 0 chrX 5009060 5009117 -161641179 + T-rich Low_complexity Low_complexity 3 59 0 2 623 2038 182 91 105 chrX 5009136 5009677 -161640619 - RMER16 LTR ERVK 0 533 1 2 623 2443 253 11 27 chrX 5009692 5009937 -161640359 + L1_Mur3 LINE L1 52 292 -7436 2 623 2176 169 131 55 chrX 5009937 5010427 -161639869 - RLTR24 LTR ERV1 -2 527 1 2 623 4804 221 29 11 chrX 5010427 5011499 -161638797 + L1_Mur3 LINE L1 49 1143 -6585 2 623 957 222 69 5 chrX 5011499 5011770 -161638526 + MTC LTR MaLR 2 284 -135 2 623 251 91 0 0 chrX 5011770 5011814 -161638482 - Lx4A LINE L1 -686 6372 6329 2 623 2482 135 21 16 chrX 5011814 5012197 -161638099 + RMER19A LTR ERVK 1 385 -352 3 623 729 170 114 48 chrX 5012198 5012365 -161637931 + RLTR23 LTR ERV1 253 430 0 3 623 3435 171 33 8 chrX 5012366 5012975 -161637321 + ORR1C1-int LTR MaLR 886 1509 0 3 623 1266 216 91 17 chrX 5012975 5013288 -161637008 + ORR1C1 LTR MaLR 1 339 -20 3 623 1510 144 81 105 chrX 5013621 5014040 -161636256 + RMER17C LTR ERVK 1 409 -1 3 623 471 178 111 0 chrX 5014074 5014164 -161636132 + ORR1C1 LTR MaLR 279 378 0 3 623 650 306 21 17 chrX 5014742 5014975 -161635321 - Lx8 LINE L1 -133 7340 7107 3 623 669 336 35 14 chrX 5015000 5015371 -161634925 + Lx8 LINE L1 6085 6463 -1010 3 623 765 314 74 17 chrX 5015419 5015934 -161634362 + L1_Mur3 LINE L1 5009 5557 -323 2 623 311 0 26 0 chrX 5015934 5015973 -161634323 + (CAAAA)n Simple_repeat Simple_repeat 3 42 0 3 623 765 317 122 12 chrX 5015973 5016136 -161634160 + L1_Mur3 LINE L1 5558 5723 -157 2 623 1961 266 48 54 chrX 5016158 5016862 -161633434 - Lx8 LINE L1 -300 7173 6474 3 623 1428 66 0 0 chrX 5016862 5017044 -161633252 + MT2C_Mm LTR ERVL 1 182 -293 3 623 1296 116 10 0 chrX 5017066 5017264 -161633032 - MTB LTR MaLR -200 200 1 4 623 211 98 19 38 chrX 5017295 5017348 -161632948 + A-rich Low_complexity Low_complexity 3 54 0 4 623 268 244 210 34 chrX 5017439 5017558 -161632738 - ID_B1 SINE B4 -8 216 77 4 623 1292 276 57 26 chrX 5017660 5018009 -161632287 + MTEb LTR MaLR 4 363 -16 4 623 352 306 64 43 chrX 5018443 5018631 -161631665 + L1MC4a LINE L1 6383 6574 -1308 4 623 221 196 20 0 chrX 5018823 5018874 -161631422 + CT-rich Low_complexity Low_complexity 1 52 0 4 623 599 359 0 22 chrX 5018894 5019079 -161631217 - B3A SINE B2 -17 181 1 4 623 1203 157 352 0 chrX 5019144 5019451 -161630845 + RMER4A LTR ERVK 52 466 0 4 623 560 382 40 30 chrX 5019664 5019961 -161630335 - MLT1C LTR MaLR 0 467 168 4 623 1185 124 11 0 chrX 5020042 5020219 -161630077 + B2_Mm1t SINE B2 1 179 -14 4 623 308 211 27 62 chrX 5020250 5020350 -161629946 + B2_Mm2 SINE B2 15 114 -102 5 623 180 0 0 0 chrX 5020366 5020386 -161629910 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 5 623 226 286 0 0 chrX 5020405 5020468 -161629828 + L1_Mur3 LINE L1 475 537 -7175 5 623 1823 205 77 7 chrX 5020470 5020682 -161629614 + Lx7 LINE L1 6803 7033 -663 5 623 252 0 0 0 chrX 5020682 5020710 -161629586 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 5 623 1823 205 77 7 chrX 5020710 5020924 -161629372 + Lx7 LINE L1 7034 7259 -437 5 623 7224 84 8 3 chrX 5021059 5022638 -161627658 - L1_Mus1 LINE L1 0 6567 4983 5 623 1067 109 0 7 chrX 5022736 5022884 -161627412 + B1_Mm SINE Alu 1 147 0 5 623 566 219 0 0 chrX 5023639 5023744 -161626552 + B1_Mur3 SINE Alu 37 141 -8 5 623 1677 68 11 46 chrX 5024222 5024483 -161625813 + L1_Mus3 LINE L1 6387 6638 0 5 623 246 195 0 118 chrX 5024811 5024904 -161625392 + Lx7 LINE L1 7270 7351 -345 5 623 592 245 6 25 chrX 5024872 5025035 -161625261 + Lx7 LINE L1 7511 7670 -26 5 623 960 276 116 26 chrX 5025119 5025953 -161624343 + L1MC4a LINE L1 6964 7872 -10 5 623 1186 53 58 23 chrX 5026022 5026182 -161624114 + L1Md_F2 LINE L1 6394 6563 -19 6 623 288 0 0 0 chrX 5026182 5026214 -161624082 + (TA)n Simple_repeat Simple_repeat 1 32 0 6 623 1186 53 58 23 chrX 5026214 5026225 -161624071 + L1Md_F2 LINE L1 6564 6571 -11 6 623 664 240 51 93 chrX 5026350 5026566 -161623730 + B3A SINE B2 1 207 -9 6 623 252 0 0 0 chrX 5026851 5026879 -161623417 + (TC)n Simple_repeat Simple_repeat 1 28 0 6 623 396 0 0 0 chrX 5026879 5026922 -161623374 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 623 966 42 0 0 chrX 5027660 5027779 -161622517 + (TTC)n Simple_repeat Simple_repeat 3 121 0 6 623 753 12 0 0 chrX 5027779 5027865 -161622431 + (TC)n Simple_repeat Simple_repeat 2 87 0 6 623 11926 71 60 30 chrX 5027954 5029709 -161620587 + RLTR22_Mus LTR ERVK 1 1808 0 6 623 1197 194 222 80 chrX 5029762 5030240 -161620056 - MT2B2 LTR ERVL -71 513 1 6 623 425 338 7 0 chrX 5030539 5030687 -161619609 + L1MDb LINE L1 994 1142 -5398 6 623 246 311 79 52 chrX 5030763 5031129 -161619167 + L1MDb LINE L1 1792 2167 -4466 6 623 270 100 0 0 chrX 5031220 5031260 -161619036 - tRNA-Ile-ATT tRNA tRNA -37 40 1 7 623 242 0 0 57 chrX 5031304 5031339 -161618957 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 7 623 1224 35 0 0 chrX 5031342 5031484 -161618812 - B1_Mus1 SINE Alu -6 142 1 7 623 383 239 109 29 chrX 5031518 5031656 -161618640 + L1MDb LINE L1 2355 2503 -4130 6 623 458 324 154 27 chrX 5031753 5032156 -161618140 + L1MDb LINE L1 4447 4900 -1637 6 623 611 281 0 58 chrX 5033277 5033451 -161616845 + RSINE1 SINE B4 2 165 0 7 623 342 61 0 0 chrX 5033452 5033501 -161616795 + (CAGAGA)n Simple_repeat Simple_repeat 6 54 0 7 623 28 48 0 0 chrX 5033521 5033563 -161616733 + AT_rich Low_complexity Low_complexity 1 42 0 7 623 1004 59 89 0 chrX 5033765 5033900 -161616396 - B1_Mus1 SINE Alu 0 148 2 7 623 550 250 50 69 chrX 5033914 5034116 -161616180 - B3A SINE B2 0 198 1 7 623 200 86 29 0 chrX 5034294 5034329 -161615967 + (TA)n Simple_repeat Simple_repeat 2 37 0 7 623 921 263 16 0 chrX 5034329 5034515 -161615781 - B3 SINE B2 -22 194 6 7 623 298 322 28 21 chrX 5035158 5035403 -161614893 + L1M2 LINE L1 2158 2468 -4114 8 623 558 0 0 0 chrX 5035435 5035497 -161614799 + (CAAAA)n Simple_repeat Simple_repeat 3 64 0 8 623 234 0 0 0 chrX 5035887 5035913 -161614383 + (TG)n Simple_repeat Simple_repeat 2 27 0 8 623 1321 92 11 0 chrX 5036539 5036724 -161613572 + B2_Mm1t SINE B2 2 188 -5 8 623 343 276 39 0 chrX 5036731 5036858 -161613438 + L1M2 LINE L1 2906 3037 -3808 8 623 390 69 0 0 chrX 5036859 5036917 -161613379 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 8 623 40 37 0 0 chrX 5037654 5037708 -161612588 + AT_rich Low_complexity Low_complexity 1 54 0 8 623 7766 48 2 4 chrX 5037708 5038851 -161611445 - L1Md_F2 LINE L1 -5 6577 5468 8 623 583 265 181 27 chrX 5038836 5038978 -161611318 - Lx7 LINE L1 0 7696 7543 8 623 409 0 54 0 chrX 5038978 5039034 -161611262 + (TATAA)n Simple_repeat Simple_repeat 5 63 0 8 623 583 265 181 27 chrX 5039034 5039151 -161611145 - Lx7 LINE L1 -154 7542 7399 8 623 1999 128 32 13 chrX 5039151 5039467 -161610829 + ORR1A2 LTR MaLR 1 322 -5 8 623 270 261 229 6 chrX 5040063 5040391 -161609905 + L1_Mur3 LINE L1 3522 3922 -1958 9 623 226 295 16 0 chrX 5040495 5040556 -161609740 + L1MD LINE L1 4064 4125 -2021 9 623 1005 123 0 0 chrX 5040579 5040725 -161609571 - B1_Mus1 SINE Alu 0 148 3 9 623 1526 231 41 16 chrX 5040880 5041245 -161609051 + ORR1D1 LTR MaLR 1 374 0 9 623 1014 284 105 47 chrX 5041263 5041504 -161608792 + L1M2 LINE L1 5061 5315 -1530 8 623 1944 107 3 133 chrX 5041504 5041881 -161608415 + ORR1A4 LTR MaLR 1 328 -1 9 623 1014 285 108 45 chrX 5041881 5042729 -161607567 + L1M2 LINE L1 5316 6233 -766 8 623 1057 72 7 0 chrX 5042729 5042867 -161607429 - B1_Mus2 SINE Alu -8 139 1 9 623 640 285 124 38 chrX 5042867 5042974 -161607322 + L1M2 LINE L1 6234 6351 -648 8 623 270 0 0 0 chrX 5042974 5043004 -161607292 + (TC)n Simple_repeat Simple_repeat 2 31 0 9 623 315 0 0 0 chrX 5043004 5043038 -161607258 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 623 640 285 124 38 chrX 5043038 5043191 -161607105 + L1M2 LINE L1 6352 6504 -495 8 623 28 29 0 0 chrX 5043196 5043231 -161607065 + AT_rich Low_complexity Low_complexity 1 35 0 9 623 231 103 0 0 chrX 5043874 5043913 -161606383 + (TTG)n Simple_repeat Simple_repeat 3 41 0 9 623 272 315 68 26 chrX 5046488 5046862 -161603434 + L1M2 LINE L1 2409 2774 -4075 1 623 270 312 141 11 chrX 5046902 5047171 -161603125 + L1M2 LINE L1 2837 3140 -3705 1 623 468 279 122 43 chrX 5047343 5047860 -161602436 + L1M2 LINE L1 3234 3791 -3054 1 623 7190 159 38 18 chrX 5047857 5049235 -161601061 + Lx5 LINE L1 5643 7047 -3 1 623 581 290 131 22 chrX 5049241 5049921 -161600375 + L1M2 LINE L1 3783 4536 -2309 1 623 526 37 500 0 chrX 5049934 5050034 -161600262 + L1_Mus1 LINE L1 6416 6565 -1 1 623 486 325 0 5 chrX 5050070 5050280 -161600016 + L1M2 LINE L1 4547 4755 -2090 1 623 614 292 49 44 chrX 5050311 5050719 -161599577 + L1M2 LINE L1 5491 5900 -945 1 623 393 261 0 11 chrX 5050720 5050809 -161599487 + MTE2b LTR MaLR 1 88 -291 1 623 40 83 0 0 chrX 5050811 5050907 -161599389 + AT_rich Low_complexity Low_complexity 1 96 0 1 623 960 276 47 38 chrX 5050907 5051246 -161599050 - Lx8 LINE L1 -2 7471 7130 1 623 486 247 51 13 chrX 5051262 5051418 -161598878 - Lx8 LINE L1 -412 7061 6900 1 623 1157 258 20 26 chrX 5051430 5051733 -161598563 + MTE2b LTR MaLR 79 379 0 1 623 236 174 0 0 chrX 5051738 5051784 -161598512 + L1M2 LINE L1 5902 5947 -898 1 623 2347 58 116 0 chrX 5051821 5052131 -161598165 + ORR1A0 LTR MaLR 1 346 0 1 623 14215 56 0 1 chrX 5052131 5053924 -161596372 + ORR1A0-int LTR MaLR 1 1792 0 1 623 2943 43 0 0 chrX 5053924 5054270 -161596026 + ORR1A0 LTR MaLR 1 346 0 1 623 7333 72 5 1 chrX 5054359 5055362 -161594934 + L1_Mus1 LINE L1 5587 6567 0 1 623 190 100 39 20 chrX 5055366 5055417 -161594879 + A-rich Low_complexity Low_complexity 3 54 0 1 623 530 287 40 23 chrX 5055430 5055605 -161594691 + B3A SINE B2 5 182 -16 1 623 242 200 0 0 chrX 5055606 5055661 -161594635 + (CAGAGA)n Simple_repeat Simple_repeat 6 60 0 1 623 2691 50 0 0 chrX 5055990 5056329 -161593967 - ORR1A1 LTR MaLR -7 339 1 1 623 13402 53 38 1 chrX 5056329 5058057 -161592239 - ORR1A1-int LTR MaLR 0 1792 1 1 623 2735 58 3 11 chrX 5058057 5058406 -161591890 - ORR1A1 LTR MaLR 0 346 1 1 623 5552 120 24 26 chrX 5059470 5061016 -161589280 + L1_Mus1 LINE L1 584 2126 -3757 1 623 9743 102 19 59 chrX 5061009 5063557 -161586739 + L1_Mus1 LINE L1 4168 6565 -2 1 623 292 304 76 0 chrX 5063737 5063829 -161586467 - PB1D10 SINE Alu -17 100 2 1 623 479 246 0 98 chrX 5063869 5064022 -161586274 - ID_B1 SINE B4 -3 221 84 1 623 2099 230 35 44 chrX 5064058 5064576 -161585720 + Lx5 LINE L1 6532 7044 -6 1 623 210 37 0 0 chrX 5065391 5065418 -161584878 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 1 623 541 275 46 34 chrX 5065687 5066011 -161584285 - L1MB1 LINE L1 0 6168 5841 1 623 246 122 0 0 chrX 5066021 5066050 -161584246 + (A)n Simple_repeat Simple_repeat 1 29 0 1 623 1040 102 0 33 chrX 5066050 5066202 -161584094 + B1_Mus1 SINE Alu 2 148 0 1 623 246 122 0 0 chrX 5066202 5066213 -161584083 + (A)n Simple_repeat Simple_repeat 1 11 0 1 623 4162 62 2 0 chrX 5066213 5066763 -161583533 - L1_Mus1 LINE L1 -143 6424 5874 1 623 815 92 0 8 chrX 5066763 5066894 -161583402 + L1_Mus1 LINE L1 6438 6567 0 1 623 1673 51 14 0 chrX 5066918 5067135 -161583161 + L1Md_A LINE L1 6359 6578 -4 1 623 286 341 11 11 chrX 5067309 5067401 -161582895 + RSINE1 SINE B4 2 93 -72 1 623 354 100 0 0 chrX 5067449 5067509 -161582787 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 623 304 286 119 0 chrX 5067588 5067714 -161582582 + L1M2 LINE L1 5111 5251 -892 1 623 955 279 163 11 chrX 5067917 5068741 -161581555 + L1MC LINE L1 3715 4663 -1483 1 623 313 243 9 53 chrX 5068790 5068903 -161581393 + Lx9 LINE L1 6649 6756 -888 1 623 642 91 0 0 chrX 5069054 5069153 -161581143 + (TG)n Simple_repeat Simple_repeat 1 99 0 1 623 566 272 108 11 chrX 5069396 5069714 -161580582 - L1MA6 LINE L1 -281 6019 5642 1 623 1659 276 15 20 chrX 5069817 5070378 -161579918 - Lx6 LINE L1 -16 7444 6506 1 623 271 280 16 16 chrX 5070513 5070640 -161579656 - L1MA6 LINE L1 -826 5314 5188 1 623 253 225 43 33 chrX 5070952 5071044 -161579252 - L1MA6 LINE L1 -1130 5013 4921 1 623 25 51 0 0 chrX 5071157 5071196 -161579100 + AT_rich Low_complexity Low_complexity 1 39 0 1 623 263 317 10 0 chrX 5071196 5071300 -161578996 - L1MA6 LINE L1 -1249 4894 4790 1 623 4151 259 32 30 chrX 5071473 5072089 -161578207 - Lx8 LINE L1 -1 7472 6851 1 623 1242 137 0 5 chrX 5072089 5072280 -161578016 - B2_Mm2 SINE B2 -5 190 1 1 623 4151 259 32 30 chrX 5072280 5072855 -161577441 - Lx8 LINE L1 -623 6850 6279 1 623 769 291 54 0 chrX 5072870 5073073 -161577223 - ID_B1 SINE B4 -5 219 6 1 623 271 202 30 10 chrX 5073124 5073224 -161577072 - L1MA6 LINE L1 -1638 4505 4404 1 623 240 337 73 47 chrX 5073337 5073611 -161576685 + L1M3e LINE L1 99 379 -6651 1 623 1431 242 44 19 chrX 5073991 5074357 -161575939 + MTE2a LTR MaLR 5 379 0 1 623 3126 304 91 46 chrX 5074357 5075754 -161574542 + MTE2a-int LTR MaLR 1 1580 0 1 623 892 277 138 24 chrX 5075754 5076094 -161574202 + MTE2a LTR MaLR 1 379 0 1 623 252 0 0 0 chrX 5076983 5077011 -161573285 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 623 280 232 32 128 chrX 5077148 5077205 -161573091 + PB1D10 SINE Alu 25 81 -36 1 623 4739 111 6 97 chrX 5077205 5078095 -161572201 + RMER17D2 LTR ERVK 1 809 0 1 623 280 232 32 128 chrX 5078095 5078131 -161572165 + PB1D10 SINE Alu 82 109 -8 1 623 1679 178 69 46 chrX 5078165 5078405 -161571891 + RMER10B LTR ERVL 1 247 -151 1 623 1097 22 15 0 chrX 5078405 5078540 -161571756 + (TTTC)n Simple_repeat Simple_repeat 3 139 0 1 623 1679 178 69 46 chrX 5078540 5078688 -161571608 + RMER10B LTR ERVL 248 398 0 1 623 392 234 95 34 chrX 5078719 5078930 -161571366 + L1M1 LINE L1 5323 5539 -761 1 623 189 0 0 0 chrX 5079929 5079950 -161570346 + (A)n Simple_repeat Simple_repeat 1 21 0 1 623 1810 162 112 3 chrX 5080603 5080925 -161569371 + ORR1B2 LTR MaLR 3 359 -8 1 623 911 121 7 0 chrX 5081364 5081513 -161568783 + (TC)n Simple_repeat Simple_repeat 2 151 0 1 623 2797 156 20 3 chrX 5082018 5082581 -161567715 + L1_Mur1 LINE L1 209 1296 -5686 1 623 2613 174 34 20 chrX 5082581 5083198 -161567098 + ORR1B2-int LTR MaLR 461 1166 -797 1 623 507 301 39 24 chrX 5083199 5083454 -161566842 + L1VL2 LINE L1 96 354 -5981 1 623 467 268 13 6 chrX 5083505 5083663 -161566633 + L1_Mus3 LINE L1 675 833 -5783 1 623 23091 145 10 13 chrX 5083642 5084430 -161565866 + L1_Mus3 LINE L1 725 1503 -4380 1 623 183 28 54 27 chrX 5084430 5084467 -161565829 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 1 623 1081 73 0 0 chrX 5084468 5084604 -161565692 - B1_Mus1 SINE Alu -9 139 4 1 623 23091 128 12 18 chrX 5084604 5086622 -161563674 + L1_Mus3 LINE L1 1504 3493 -2390 1 623 267 54 0 0 chrX 5086622 5086659 -161563637 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 623 23091 128 12 18 chrX 5086659 5088395 -161561901 + L1_Mus3 LINE L1 3494 5252 -631 1 623 7056 93 14 4 chrX 5088386 5089522 -161560774 + L1_Mus3 LINE L1 5491 6637 -1 1 623 826 204 6 0 chrX 5089522 5089694 -161560602 + MERVL-int LTR ERVL 34 206 -5279 1 623 9677 96 19 7 chrX 5089705 5092234 -161558062 - Lx3_Mus LINE L1 -8 7001 4450 1 623 16104 121 6 11 chrX 5092235 5095716 -161554580 - L1_Mus2 LINE L1 -1 6565 3105 1 623 14501 119 7 9 chrX 5095708 5098884 -161551412 + L1_Mus2 LINE L1 3395 6565 -1 1 623 9677 96 19 7 chrX 5098885 5101414 -161548882 + Lx3_Mus LINE L1 4450 7001 -8 1 623 826 204 6 0 chrX 5101425 5101597 -161548699 - MERVL-int LTR ERVL -5279 206 34 1 623 15767 139 33 2 chrX 5101597 5104463 -161545833 - L1_Mus3 LINE L1 -1 6637 3491 1 623 249 57 0 0 chrX 5104463 5104498 -161545798 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 623 15767 133 12 2 chrX 5104498 5105468 -161544828 - L1_Mus3 LINE L1 -2393 3490 2516 1 623 19221 75 0 9 chrX 5105465 5108197 -161542099 + L1Md_F2 LINE L1 2879 5586 -297 1 623 7440 80 1 9 chrX 5108198 5109199 -161541097 + L1Md_F2 LINE L1 5588 6580 -2 1 623 5071 138 12 48 chrX 5109871 5111330 -161538966 - L1_Mus3 LINE L1 -3763 2120 725 1 623 355 301 8 0 chrX 5111338 5111471 -161538825 - L1_Mus3 LINE L1 -5813 803 670 1 77 593 293 65 97 chrX 5111547 5111887 -161538409 - L1VL1 LINE L1 -6065 357 29 1 624 17895 94 17 65 chrX 5111886 5113505 -161536791 - L1_Mur1 LINE L1 -1425 4461 2843 1 624 975 235 56 104 chrX 5113505 5113918 -161536378 + RLTR9C LTR ERVK 1 393 0 1 624 17895 94 17 65 chrX 5113918 5114746 -161535550 - L1_Mur1 LINE L1 -3044 2842 2016 1 624 371 21 0 20 chrX 5114746 5114795 -161535501 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 1 624 1038 120 0 0 chrX 5114795 5114945 -161535351 - B2_Mm2 SINE B2 -43 152 3 1 624 17895 94 17 65 chrX 5114945 5115314 -161534982 - L1_Mur1 LINE L1 -3871 2015 1637 1 624 30634 115 3 1 chrX 5115311 5120557 -161529739 - L1_Mus1 LINE L1 0 6567 1312 1 624 2818 31 0 24 chrX 5120557 5120892 -161529404 + IAPLTR2b LTR ERVK 1 327 0 1 624 30634 139 86 11 chrX 5120892 5121616 -161528680 - L1_Mus1 LINE L1 -4572 1311 528 1 624 3046 122 25 28 chrX 5121620 5122403 -161527893 - L1_Mur1 LINE L1 -4237 1649 865 1 624 862 93 132 0 chrX 5122403 5122532 -161527764 - B1_Mm SINE Alu 0 147 2 1 624 1771 218 176 32 chrX 5122532 5122863 -161527433 - L1_Mur1 LINE L1 -6102 882 658 1 624 7436 153 6 25 chrX 5122865 5124131 -161526165 + MERVL-int LTR ERVL 194 1425 -4060 1 624 7581 72 2 10 chrX 5124505 5125983 -161524313 - L1Md_F2 LINE L1 -13 6569 5099 1 624 25 0 0 0 chrX 5125986 5126011 -161524285 + AT_rich Low_complexity Low_complexity 1 25 0 1 624 3943 98 60 3 chrX 5126011 5126595 -161523701 - Lx3_Mus LINE L1 0 7009 6393 1 624 455 0 0 0 chrX 5126595 5126645 -161523651 - Lx3_Mus LINE L1 -1147 5862 5813 1 624 553 276 0 29 chrX 5126645 5126783 -161523513 - RSINE1 SINE B4 -29 136 3 1 624 397 256 14 7 chrX 5126870 5126985 -161523311 - PB1D10 SINE Alu 0 120 7 1 624 7527 73 1 11 chrX 5127019 5128502 -161521794 - L1Md_F2 LINE L1 -13 6569 5099 1 624 28 0 0 0 chrX 5128502 5128530 -161521766 + AT_rich Low_complexity Low_complexity 1 28 0 1 624 3918 101 56 3 chrX 5128530 5129116 -161521180 - Lx3_Mus LINE L1 0 7009 6393 1 624 455 0 0 0 chrX 5129116 5129166 -161521130 - Lx3_Mus LINE L1 -1147 5862 5813 1 624 569 269 0 29 chrX 5129166 5129304 -161520992 - RSINE1 SINE B4 -29 136 3 1 624 397 256 14 7 chrX 5129391 5129506 -161520790 - PB1D10 SINE Alu 0 120 7 1 624 7558 73 1 11 chrX 5129540 5131021 -161519275 - L1Md_F2 LINE L1 -13 6569 5099 1 624 28 0 0 0 chrX 5131021 5131049 -161519247 + AT_rich Low_complexity Low_complexity 1 28 0 1 624 3910 102 55 3 chrX 5131049 5131636 -161518660 - Lx3_Mus LINE L1 0 7009 6393 1 624 455 0 0 0 chrX 5131636 5131686 -161518610 - Lx3_Mus LINE L1 -1147 5862 5813 1 624 569 269 0 29 chrX 5131686 5131824 -161518472 - RSINE1 SINE B4 -29 136 3 1 624 399 256 14 7 chrX 5131911 5132026 -161518270 - PB1D10 SINE Alu 0 120 7 1 624 7487 75 1 11 chrX 5132060 5133542 -161516754 - L1Md_F2 LINE L1 -13 6569 5099 1 624 25 0 0 0 chrX 5133542 5133567 -161516729 + AT_rich Low_complexity Low_complexity 1 25 0 1 624 3934 99 56 3 chrX 5133570 5134156 -161516140 - Lx3_Mus LINE L1 0 7009 6393 1 624 455 0 0 0 chrX 5134156 5134206 -161516090 - Lx3_Mus LINE L1 -1147 5862 5813 1 624 569 269 0 29 chrX 5134206 5134344 -161515952 - RSINE1 SINE B4 -29 136 3 1 624 397 256 14 7 chrX 5134431 5134546 -161515750 - PB1D10 SINE Alu 0 120 7 1 624 1032 110 0 18 chrX 5134580 5134739 -161515557 - L1Md_F2 LINE L1 -13 6569 6413 1 624 2354 86 3 6 chrX 5134739 5135066 -161515230 - IAPLTR3 LTR ERVK 0 326 1 1 624 12570 152 19 20 chrX 5135072 5138447 -161511849 - IAPLTR3-int LTR ERVK -273 7240 4216 1 624 4456 12 0 24 chrX 5138447 5138952 -161511344 - MT2_Mm LTR ERVL 0 493 1 1 624 321 0 0 0 chrX 5138952 5138990 -161511306 - MERVL-int LTR ERVL 0 5485 5448 1 624 324 157 58 46 chrX 5138990 5139077 -161511219 - ORR1A3-int LTR MaLR -1323 640 553 1 624 48174 18 6 0 chrX 5139081 5144403 -161505893 - MERVL-int LTR ERVL -130 5355 1 1 624 4456 12 0 24 chrX 5144403 5144908 -161505388 - MT2_Mm LTR ERVL 0 493 1 1 624 35409 51 19 2 chrX 5144908 5149156 -161501140 - IAPLTR3-int LTR ERVK -2498 4323 1 1 624 2317 92 3 6 chrX 5149156 5149483 -161500813 - IAPLTR3 LTR ERVK 0 326 1 1 624 34183 108 14 14 chrX 5149483 5155886 -161494410 - L1Md_F2 LINE L1 -164 6418 31 1 624 23165 133 4 8 chrX 5155889 5160368 -161489928 + L1_Mus2 LINE L1 2108 6565 -1 1 624 10272 100 21 7 chrX 5160367 5162891 -161487405 + Lx3_Mus LINE L1 4448 7001 -8 1 624 869 209 6 0 chrX 5162902 5163074 -161487222 - MERVL-int LTR ERVL -5279 206 34 2 624 21003 138 24 9 chrX 5163074 5167571 -161482725 - L1_Mus3 LINE L1 0 6638 1880 2 624 6471 103 3 1 chrX 5167555 5168467 -161481829 - L1_Mus3 LINE L1 -6459 1269 359 2 624 5105 77 3 0 chrX 5168464 5169129 -161481167 - L1_Mm LINE L1 -769 5114 4448 2 624 352 296 42 142 chrX 5169142 5169382 -161480914 + L1_Rod LINE L1 16 231 -6941 2 624 857 110 0 0 chrX 5169901 5170028 -161480268 - B1_Mus1 SINE Alu -1 147 21 2 624 342 333 0 0 chrX 5171169 5171256 -161479040 + L1_Rod LINE L1 155 241 -6931 2 624 1359 94 5 0 chrX 5171502 5171694 -161478602 + L1_Mus2 LINE L1 6373 6565 -1 2 624 5540 119 28 7 chrX 5171695 5172576 -161477720 + MusHAL1 LINE L1 1186 2085 -627 2 624 756 33 0 0 chrX 5172622 5172713 -161477583 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 2 624 848 60 0 17 chrX 5172713 5172832 -161477464 - B1_Mus2 SINE Alu -7 140 24 2 624 806 215 36 81 chrX 5172851 5173099 -161477197 + RLTR11A LTR ERVK 231 467 -61 2 624 5584 149 38 5 chrX 5173110 5174063 -161476233 - Lx LINE L1 0 6654 5671 2 624 3508 173 26 37 chrX 5174065 5174707 -161475589 + L1VL1 LINE L1 196 830 -5592 2 624 10400 133 265 1 chrX 5174716 5176803 -161473493 + L1_Mm LINE L1 2063 4701 -1182 2 624 5522 91 95 10 chrX 5176797 5177606 -161472690 + L1_Mus3 LINE L1 5690 6567 -71 2 624 450 0 0 0 chrX 5177704 5177754 -161472542 + (TAAAA)n Simple_repeat Simple_repeat 1 50 0 2 624 11968 155 34 15 chrX 5177757 5178146 -161472150 - L1_Mm LINE L1 -207 5676 5258 2 624 3819 92 20 11 chrX 5178146 5178686 -161471610 - L1_Mus1 LINE L1 0 6567 6023 2 624 11968 155 34 15 chrX 5178686 5179285 -161471011 - L1_Mm LINE L1 -626 5257 4642 2 624 348 24 0 0 chrX 5179285 5179326 -161470970 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2 624 11968 155 34 15 chrX 5179326 5180515 -161469781 - L1_Mm LINE L1 -1242 4641 3458 2 624 414 0 0 0 chrX 5180515 5180561 -161469735 + (TTTC)n Simple_repeat Simple_repeat 1 46 0 2 624 4973 117 1 3 chrX 5180586 5181315 -161468981 - L1_Mus4 LINE L1 -7 6629 5902 2 624 3908 158 7 9 chrX 5181316 5181994 -161468302 + L1_Mus4 LINE L1 5207 5883 0 2 624 9002 100 12 51 chrX 5181997 5182599 -161467697 - L1_Mur2 LINE L1 -453 3461 2889 2 624 2537 142 85 0 chrX 5182599 5183057 -161467239 - Lx3C LINE L1 -1 6975 6479 2 624 9002 109 24 50 chrX 5183057 5184054 -161466242 - L1_Mur2 LINE L1 -1026 2888 1710 2 624 6594 115 26 4 chrX 5184054 5185016 -161465280 + RLTR13C1 LTR ERVK 1 983 0 2 624 6672 188 123 44 chrX 5185016 5185196 -161465100 - L1_Mur2 LINE L1 -4168 1709 1535 2 624 272 48 0 23 chrX 5186132 5186175 -161464121 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 2 624 6348 68 13 21 chrX 5186263 5186597 -161463699 - RLTR13B1 LTR ERVK 0 893 578 2 624 5110 48 0 8 chrX 5186597 5187227 -161463069 - L1Md_F2 LINE L1 0 6582 5958 2 624 6348 68 13 21 chrX 5187227 5187792 -161462504 - RLTR13B1 LTR ERVK -316 577 1 2 624 4934 104 19 7 chrX 5187978 5188983 -161461313 - L1VL4 LINE L1 -2326 1233 213 2 624 298 143 0 0 chrX 5188986 5189028 -161461268 - L1VL4 LINE L1 -6260 42 1 2 624 345 202 25 0 chrX 5189028 5189107 -161461189 + RLTR11A LTR ERVK 448 528 0 2 624 681 219 119 11 chrX 5189123 5189367 -161460929 + MT2A LTR ERVL 343 601 0 2 624 300 336 58 7 chrX 5189441 5189579 -161460717 + L1_Rod LINE L1 71 215 -6957 2 624 4387 92 0 0 chrX 5189604 5190188 -161460108 - MT2B2 LTR ERVL 0 584 1 2 624 530 313 21 25 chrX 5190265 5190501 -161459795 + L1_Rod LINE L1 7 241 -6931 2 624 242 233 111 0 chrX 5190557 5190647 -161459649 + L1_Rod LINE L1 7 106 -7066 2 624 522 268 25 38 chrX 5191338 5191497 -161458799 + L1_Rod LINE L1 6 162 -7010 2 624 237 43 42 21 chrX 5191502 5191550 -161458746 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 2 624 7781 66 1 10 chrX 5191573 5192887 -161457409 - L1Md_F2 LINE L1 0 6582 5284 2 624 2021 81 0 0 chrX 5192896 5193169 -161457127 + L1_Mm LINE L1 1698 1970 -3913 2 624 476 327 46 46 chrX 5193680 5193917 -161456379 + L1_Rod LINE L1 7 243 -6929 2 624 475 316 31 35 chrX 5194165 5194391 -161455905 + L1_Rod LINE L1 13 237 -6935 2 624 4400 148 45 7 chrX 5194434 5195142 -161455154 + RMER19A LTR ERVK 3 737 0 2 624 251 247 45 45 chrX 5195360 5195449 -161454847 + L1_Rod LINE L1 18 106 -7066 2 624 337 291 30 54 chrX 5195529 5195696 -161454600 + L1_Rod LINE L1 14 176 -6996 2 624 248 337 90 21 chrX 5195844 5196032 -161454264 + L1_Rod LINE L1 40 240 -6932 2 624 489 326 40 26 chrX 5196679 5196906 -161453390 + L1_Rod LINE L1 14 243 -6929 2 624 252 359 0 0 chrX 5196900 5196978 -161453318 + L1_Rod LINE L1 163 240 -6932 2 624 520 311 9 44 chrX 5196980 5197209 -161453087 + L1_Rod LINE L1 14 234 -6938 2 624 277 293 60 87 chrX 5197933 5198198 -161452098 + L1_Rod LINE L1 15 272 -6900 2 624 275 330 8 42 chrX 5198173 5198293 -161452003 + L1_Rod LINE L1 15 130 -7042 2 624 558 295 0 0 chrX 5198530 5198669 -161451627 + L1_Rod LINE L1 71 209 -6963 2 624 592 290 59 22 chrX 5198946 5199168 -161451128 + L1_Rod LINE L1 16 245 -6927 2 624 253 256 23 47 chrX 5199222 5199308 -161450988 + L1_Rod LINE L1 21 104 -7068 2 624 359 351 26 21 chrX 5199471 5199663 -161450633 + L1_Rod LINE L1 9 201 -6971 2 624 254 263 56 136 chrX 5199708 5199906 -161450390 + L1_Rod LINE L1 15 196 -6976 2 624 534 338 31 34 chrX 5199951 5200245 -161450051 + L1_Rod LINE L1 24 316 -6856 2 624 347 196 41 52 chrX 5200429 5200526 -161449770 + L1_Rod LINE L1 11 106 -7066 2 624 418 321 46 50 chrX 5200603 5200842 -161449454 + L1_Rod LINE L1 18 255 -6917 2 624 470 306 51 42 chrX 5201076 5201291 -161449005 + L1_Rod LINE L1 32 248 -6924 2 624 262 316 10 39 chrX 5201352 5201454 -161448842 + L1_Rod LINE L1 6 104 -7068 2 624 352 327 31 25 chrX 5201672 5201835 -161448461 + L1_Rod LINE L1 72 235 -6937 2 624 313 253 0 48 chrX 5201906 5201989 -161448307 + L1_Rod LINE L1 443 521 -7087 2 624 2848 249 85 28 chrX 5202163 5203327 -161446969 + L1_Rod LINE L1 443 1438 -4409 2 624 618 245 14 20 chrX 5203413 5203559 -161446737 - B1_Mur1 SINE Alu 0 149 5 2 624 1785 218 48 33 chrX 5204709 5205188 -161445108 - RMER15 LTR ERVL -87 488 3 2 624 7290 105 17 4 chrX 5206196 5207306 -161442990 + L1_Mus3 LINE L1 5513 6637 -1 2 624 1815 280 53 34 chrX 5207659 5208150 -161442146 + L1_Rod LINE L1 440 947 -6661 2 624 2721 98 21 29 chrX 5208150 5208568 -161441728 - RLTR9F LTR ERVK 0 415 1 2 624 1815 280 53 34 chrX 5208568 5208778 -161441518 + L1_Rod LINE L1 948 1154 -6454 2 624 987 240 48 53 chrX 5208777 5209133 -161441163 + L1_Rod LINE L1 2439 2792 -3055 2 624 2954 119 117 8 chrX 5209149 5209680 -161440616 - RLTR1D LTR ERV1 -16 589 1 2 624 666 193 27 95 chrX 5209681 5209958 -161440338 + L1_Rod LINE L1 2794 3039 -3107 2 624 743 272 13 0 chrX 5209960 5210192 -161440104 + L1_Mur3 LINE L1 55 289 -7439 2 624 2460 134 26 12 chrX 5210221 5210650 -161439646 + RMER4B LTR ERVK 1 435 -150 2 624 1870 247 70 13 chrX 5210771 5211313 -161438983 + L1_Mur3 LINE L1 684 1256 -6472 2 624 37476 33 4 8 chrX 5211332 5216713 -161433583 + L1Md_T LINE L1 233 5586 -297 2 624 8149 45 18 0 chrX 5216713 5217691 -161432605 + L1Md_T LINE L1 5587 6582 0 2 624 3706 206 65 33 chrX 5217692 5218647 -161431649 + L1_Mur3 LINE L1 1268 2252 -3628 2 624 4157 25 38 0 chrX 5218647 5219122 -161431174 - MT2_Mm LTR ERVL 0 493 1 2 624 3706 206 65 33 chrX 5219122 5219203 -161431093 + L1_Mur3 LINE L1 2253 2337 -3543 2 624 216 0 0 0 chrX 5219203 5219227 -161431069 + (T)n Simple_repeat Simple_repeat 1 24 0 2 624 25 0 0 0 chrX 5219242 5219267 -161431029 + AT_rich Low_complexity Low_complexity 1 25 0 2 624 30153 11 4 2 chrX 5219292 5225232 -161425064 - L1Md_A LINE L1 0 6582 628 2 624 2430 175 54 2 chrX 5225235 5225691 -161424605 + L1_Mur3 LINE L1 2329 2805 -3075 2 624 235 0 57 0 chrX 5225691 5225726 -161424570 + (CAA)n Simple_repeat Simple_repeat 2 38 0 2 624 2430 175 54 2 chrX 5225726 5225802 -161424494 + L1_Mur3 LINE L1 2806 2889 -2991 2 624 19043 103 43 2 chrX 5225992 5229839 -161420457 + L1VL1 LINE L1 226 4229 -1654 2 624 32268 66 8 29 chrX 5229844 5235148 -161415148 + L1Md_F2 LINE L1 236 5588 -298 2 624 6469 115 10 3 chrX 5235149 5236135 -161414161 + L1Md_F2 LINE L1 5590 6582 -3 2 624 348 243 54 17 chrX 5236460 5236640 -161413656 + L1_Mus2 LINE L1 525 815 -5804 2 624 10156 131 15 21 chrX 5236625 5238862 -161411434 + L1_Mus2 LINE L1 728 2950 -2936 2 624 8266 81 31 0 chrX 5238862 5240703 -161409593 + L1_Mus2 LINE L1 4682 6569 0 2 624 849 194 109 7 chrX 5240720 5241005 -161409291 + L1_Mur3 LINE L1 3073 3386 -2494 2 624 4992 184 45 55 chrX 5241011 5241727 -161408569 + L1_Mur3 LINE L1 4418 5101 -779 2 624 495 45 0 0 chrX 5241727 5241793 -161408503 + (CTAA)n Simple_repeat Simple_repeat 3 68 0 2 624 4992 184 45 55 chrX 5241793 5242409 -161407887 + L1_Mur3 LINE L1 5102 5736 -144 2 625 631 343 88 21 chrX 5243574 5244050 -161406246 - Lx8 LINE L1 -236 7237 6730 2 625 1327 301 77 21 chrX 5244065 5244636 -161405660 - Lx8 LINE L1 -800 6673 6071 2 625 724 284 6 44 chrX 5244985 5245344 -161404952 + RMER19A LTR ERVK 1 259 -478 2 625 368 277 0 61 chrX 5245918 5246083 -161404213 + GA-rich Low_complexity Low_complexity 4 158 0 2 625 884 291 77 35 chrX 5248556 5248894 -161401402 - MTE2a LTR MaLR 0 379 28 2 625 483 284 60 7 chrX 5248896 5249045 -161401251 - MTE2a-int LTR MaLR 0 1580 1424 2 625 770 168 29 23 chrX 5249046 5249217 -161401079 - L1_Mur3 LINE L1 -1120 4760 4589 2 625 4097 122 51 5 chrX 5250543 5251208 -161399088 - ORR1A2-int LTR MaLR -424 1539 844 2 625 2843 132 4 15 chrX 5251208 5251670 -161398626 + RLTR22_Mur LTR ERVK 1 457 -1391 2 625 2680 87 106 2 chrX 5251668 5251913 -161398383 + RLTR22_Mur LTR ERVK 1066 1321 -527 2 625 459 78 0 0 chrX 5251913 5251977 -161398319 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 625 2680 87 106 2 chrX 5251977 5252147 -161398149 + RLTR22_Mur LTR ERVK 1322 1523 -325 2 625 1074 97 7 0 chrX 5252348 5252503 -161397793 - ORR1A2-int LTR MaLR -1807 156 1 2 625 2329 115 12 0 chrX 5252503 5252826 -161397470 - ORR1A2 LTR MaLR 0 327 1 2 625 230 139 186 0 chrX 5252826 5252869 -161397427 + MT2B LTR ERVL 207 257 -344 2 625 7133 137 19 16 chrX 5252836 5254009 -161396287 + ORR1A2-int LTR MaLR 788 1963 0 2 625 365 169 0 0 chrX 5254009 5254074 -161396222 + ORR1A2 LTR MaLR 1 65 -262 2 625 5843 14 0 0 chrX 5254783 5255571 -161394725 - L1Md_T LINE L1 -605 5977 5190 2 625 4987 35 2 0 chrX 5255572 5256194 -161394102 + L1Md_T LINE L1 5991 6582 0 2 625 388 282 55 27 chrX 5256339 5256485 -161393811 + RMER16-int LTR ERVK 193 342 -5064 2 625 288 0 0 0 chrX 5256863 5256895 -161393401 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 625 245 235 58 13 chrX 5257008 5257163 -161393133 + (TA)n Simple_repeat Simple_repeat 2 163 0 2 625 1536 275 85 97 chrX 5257196 5258121 -161392175 - RMER17B LTR ERVK -44 914 1 2 625 1455 283 86 35 chrX 5258323 5259301 -161390995 + RMER16-int LTR ERVK 2839 3866 -1540 2 625 3460 132 66 11 chrX 5259845 5260405 -161389891 - MT2B LTR ERVL -8 593 3 2 625 337 202 50 58 chrX 5260405 5260436 -161389860 - ORR1A3-int LTR MaLR -1348 615 586 2 625 414 327 50 30 chrX 5260510 5260847 -161389449 + RMER16-int LTR ERVK 4673 5016 -390 2 625 258 278 42 70 chrX 5261080 5261223 -161389073 + IAP-d-int LTR ERVK 6387 6525 -17 2 625 1831 85 73 4 chrX 5261740 5262000 -161388296 + L1_Mus1 LINE L1 6285 6562 -5 2 625 1385 144 26 9 chrX 5262092 5262323 -161387973 + ORR1A2 LTR MaLR 93 327 0 2 625 2146 151 3 3 chrX 5262890 5263236 -161387060 - ORR1A1 LTR MaLR 0 346 1 2 625 934 154 0 6 chrX 5263577 5263740 -161386556 + RMER19A LTR ERVK 1 162 -575 2 625 321 266 51 0 chrX 5263715 5263794 -161386502 + RMER19A LTR ERVK 49 131 -771 2 625 1508 132 0 8 chrX 5265421 5265657 -161384639 + RLTR19C LTR ERVK 1 234 -272 2 625 324 0 0 0 chrX 5265657 5265693 -161384603 + (T)n Simple_repeat Simple_repeat 1 36 0 2 625 8571 10 1 0 chrX 5265737 5267416 -161382880 - L1Md_T LINE L1 0 6582 4901 2 625 13461 24 0 0 chrX 5267403 5269065 -161381231 + L1Md_T LINE L1 3243 4904 -979 2 625 1858 128 0 24 chrX 5269065 5269361 -161380935 + RLTR19C LTR ERVK 218 506 0 2 625 3070 163 128 67 chrX 5269364 5270205 -161380091 + RLTR19-int LTR ERVK 4 896 -5241 2 625 1438 235 83 8 chrX 5270210 5270570 -161379726 + RMER12 LTR ERVK 936 1322 0 2 625 12235 127 75 13 chrX 5270570 5272168 -161378128 + RLTR19-int LTR ERVK 914 2620 -3517 2 625 513 47 0 0 chrX 5272168 5272232 -161378064 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 625 12235 121 102 16 chrX 5272232 5274039 -161376257 + RLTR19-int LTR ERVK 2621 4714 -1423 2 625 4077 85 85 6 chrX 5274023 5274649 -161375647 + RLTR19-int LTR ERVK 4824 5498 -639 2 625 210 304 48 97 chrX 5275615 5275739 -161374557 - PB1D9 SINE Alu 0 120 3 2 625 450 0 0 0 chrX 5276595 5276645 -161373651 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 625 815 132 0 0 chrX 5279193 5279307 -161370989 + RLTR19-int LTR ERVK 5485 5598 -539 2 625 272 310 56 33 chrX 5280190 5280370 -161369926 + RLTR14-int LTR ERV1 4885 5068 -249 2 625 1723 116 68 0 chrX 5280614 5280924 -161369372 + RLTR19C LTR ERVK 1 331 -175 2 625 6598 98 82 22 chrX 5280925 5281773 -161368523 - L1_Mus4 LINE L1 -4 6632 5725 2 625 7363 54 8 0 chrX 5281773 5282659 -161367637 - RLTR13B1 LTR ERVK 0 893 1 2 625 6598 172 18 19 chrX 5282659 5283757 -161366539 - L1_Mus3 LINE L1 -159 5724 4613 2 625 2264 146 0 23 chrX 5283745 5284131 -161366165 + L1_Mus3 LINE L1 5798 6174 -464 2 625 7179 125 22 3 chrX 5284131 5285923 -161364373 + L1_Mus3 LINE L1 4805 6635 -3 2 625 1845 134 0 4 chrX 5285950 5286227 -161364069 + L1VL1 LINE L1 18 293 -6129 2 625 4888 67 2 2 chrX 5286224 5286856 -161363440 + L1Md_F2 LINE L1 4954 5585 -298 3 625 7340 83 4 25 chrX 5286857 5287874 -161362422 + L1Md_F2 LINE L1 5587 6582 0 3 625 246 363 40 40 chrX 5288481 5288656 -161361640 - ORR1E LTR MaLR 0 379 205 3 625 269 316 0 0 chrX 5288705 5288781 -161361515 + RSINE1 SINE B4 5 80 -85 3 625 263 182 115 115 chrX 5288855 5288942 -161361354 - ORR1E LTR MaLR -226 133 47 3 625 828 69 0 0 chrX 5289433 5289549 -161360747 + (TTCC)n Simple_repeat Simple_repeat 3 118 0 3 625 438 20 0 0 chrX 5290117 5290168 -161360128 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 625 396 0 0 0 chrX 5290168 5290211 -161360085 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 625 473 198 10 0 chrX 5290285 5290381 -161359915 - B1_Mur4 SINE Alu -13 137 41 3 625 235 0 0 160 chrX 5290385 5290504 -161359792 + (CTCTG)n Simple_repeat Simple_repeat 5 104 0 3 625 242 203 0 63 chrX 5290505 5290568 -161359728 - B1_Mur4 SINE Alu -90 60 2 3 625 1567 223 12 6 chrX 5290568 5290906 -161359390 - ORR1B1 LTR MaLR -41 353 14 3 625 537 298 32 41 chrX 5290918 5291257 -161359039 - RLTR15 LTR ERVK -21 338 3 3 625 14988 74 3 7 chrX 5291538 5292541 -161357755 + L1_Mm LINE L1 3579 4582 -1301 3 625 3123 19 85 0 chrX 5292541 5292906 -161357390 - MTA_Mm LTR MaLR 0 396 1 3 625 14988 74 3 7 chrX 5292906 5293918 -161356378 + L1_Mm LINE L1 4583 5614 -719 3 625 7482 76 8 4 chrX 5293918 5294897 -161355399 + L1Md_F2 LINE L1 5587 6569 -13 3 625 1208 266 27 22 chrX 5294897 5294946 -161355350 + L1_Mm LINE L1 5615 5667 -666 3 625 2495 100 22 38 chrX 5294989 5295354 -161354942 - RLTR10D LTR ERVK 0 359 1 3 625 49868 68 18 13 chrX 5295354 5296695 -161353601 - IAP-d-int LTR ERVK 0 6542 5256 3 625 1252 41 87 0 chrX 5296695 5296867 -161353429 + L1Md_F3 LINE L1 6398 6584 0 3 625 49868 68 18 13 chrX 5296867 5301903 -161348393 - IAP-d-int LTR ERVK -1287 5255 133 3 625 1559 62 10 0 chrX 5301945 5302153 -161348143 + L1Md_F2 LINE L1 6373 6582 0 3 625 3135 182 42 0 chrX 5302157 5302751 -161347545 + MurERV4_19-int LTR ERVK 394 1012 -4768 3 625 1701 40 0 0 chrX 5302751 5302953 -161347343 - L1Md_F2 LINE L1 -565 6017 5816 3 625 1584 95 25 33 chrX 5302953 5303259 -161347037 + L1_Mus1 LINE L1 6329 6567 0 3 625 4090 160 25 0 chrX 5303259 5303933 -161346363 + MurERV4_19-int LTR ERVK 999 1689 -4091 3 625 239 220 0 17 chrX 5303941 5304001 -161346295 + L1_Mur2 LINE L1 363 421 -6291 3 625 4539 87 3 8 chrX 5305570 5306198 -161344098 + L1_Mm LINE L1 4918 5542 -341 3 625 2330 333 65 24 chrX 5306218 5307196 -161343100 - RodERV21-int LTR ERV1 -105 4886 3869 3 625 2241 111 35 0 chrX 5307196 5307512 -161342784 - ORR1A2 LTR MaLR 0 327 1 3 625 2330 346 23 22 chrX 5307512 5307870 -161342426 - RodERV21-int LTR ERV1 -1123 3868 3509 3 625 25 0 0 0 chrX 5309139 5309164 -161341132 + AT_rich Low_complexity Low_complexity 1 25 0 3 625 279 306 54 27 chrX 5309349 5309460 -161340836 - RodERV21-int LTR ERV1 -2682 4874 4761 3 625 585 0 0 0 chrX 5310997 5311062 -161339234 + (GA)n Simple_repeat Simple_repeat 2 66 0 3 625 263 220 0 0 chrX 5311075 5311125 -161339171 - RodERV21-int LTR ERV1 -3194 3897 3848 3 625 306 309 35 35 chrX 5311159 5311357 -161338939 - RodERV21-int LTR ERV1 -3308 3783 3586 3 625 1041 118 6 11 chrX 5311424 5311604 -161338692 + (GA)n Simple_repeat Simple_repeat 2 180 0 3 625 6357 276 52 43 chrX 5311605 5313605 -161336691 - RodERV21-int LTR ERV1 -2293 2698 682 3 625 763 266 32 39 chrX 5313820 5314102 -161336194 - RodERV21-int LTR ERV1 -4674 317 38 3 625 1675 203 38 86 chrX 5315877 5316012 -161334284 + RMER19A LTR ERVK 6 239 -498 3 625 243 0 0 0 chrX 5316012 5316039 -161334257 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 625 441 0 0 0 chrX 5316039 5316087 -161334209 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 625 1675 206 206 25 chrX 5316087 5316534 -161333762 + RMER19A LTR ERVK 240 736 -1 3 625 591 105 0 0 chrX 5317155 5317241 -161333055 - L1VL2 LINE L1 -6055 280 195 3 625 585 0 0 0 chrX 5317270 5317335 -161332961 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 625 1414 52 40 0 chrX 5317677 5317851 -161332445 - B2_Mm2 SINE B2 -14 181 1 3 625 576 0 0 0 chrX 5318191 5318255 -161332041 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 625 2587 224 85 22 chrX 5318258 5318855 -161331441 - Lx2B LINE L1 -7 6993 6359 3 625 257 186 0 0 chrX 5318857 5318900 -161331396 + Lx2B LINE L1 6337 6379 -621 3 625 5543 121 69 34 chrX 5318919 5319594 -161330702 + L1VL2 LINE L1 389 1123 -5511 3 625 3868 79 2 2 chrX 5319594 5320090 -161330206 + L1_Mus2 LINE L1 6070 6565 -1 3 625 8204 173 21 93 chrX 5320090 5322271 -161328025 + L1VL2 LINE L1 1124 3102 -2784 3 625 6480 99 25 9 chrX 5322318 5322360 -161327936 + MusHAL1 LINE L1 1077 1119 -1593 3 625 3514 82 10 12 chrX 5322360 5322843 -161327453 + L1_Mus1 LINE L1 6086 6567 0 3 625 6480 99 25 9 chrX 5322843 5323794 -161326502 + MusHAL1 LINE L1 1120 2086 -626 3 625 405 0 0 0 chrX 5326013 5326058 -161324238 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 625 529 40 13 13 chrX 5326222 5326299 -161323997 + (GA)n Simple_repeat Simple_repeat 2 78 0 3 625 600 279 7 0 chrX 5326630 5326784 -161323512 + B3A SINE B2 6 160 -38 3 625 414 0 0 0 chrX 5326813 5326859 -161323437 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 3 625 380 128 33 65 chrX 5327913 5328005 -161322291 - L1Md_A LINE L1 0 6582 6494 3 625 1776 154 96 6 chrX 5328607 5328972 -161321324 + RMER17C LTR ERVK 5 402 -8 3 625 233 303 0 0 chrX 5329247 5329313 -161320983 - ID4_ SINE ID -16 67 2 3 625 1802 178 91 8 chrX 5330237 5330600 -161319696 + RMER10B LTR ERVL 5 397 -1 3 625 758 83 0 0 chrX 5330686 5330782 -161319514 + RLTR1B-int LTR ERV1 3 98 -3201 3 625 522 115 0 0 chrX 5330780 5330858 -161319438 + MMVL30-int LTR ERV1 3544 3621 -77 3 625 701 104 25 57 chrX 5330839 5330988 -161319308 + RLTR1B-int LTR ERV1 3221 3299 0 3 625 3090 138 65 42 chrX 5330990 5331563 -161318733 + RLTR1D LTR ERV1 4 589 -16 3 625 1308 158 6 62 chrX 5331589 5331970 -161318326 + RMER17C LTR ERVK 16 439 -519 3 625 1239 208 29 77 chrX 5332337 5332753 -161317543 - RMER17C LTR ERVK 0 410 15 3 625 5052 136 42 24 chrX 5332753 5333630 -161316666 - RMER17C-int LTR ERVK -14 3224 2332 3 625 317 211 86 9 chrX 5333600 5333705 -161316591 - RMER17C-int LTR ERVK -785 2453 2341 3 625 1679 99 55 0 chrX 5333706 5333959 -161316337 - ORR1A2 LTR MaLR -10 317 51 3 625 1869 128 3 41 chrX 5333979 5334321 -161315975 - RMER17C-int LTR ERVK -810 2428 2100 3 625 1078 139 27 31 chrX 5334324 5334546 -161315750 - LTRIS5 LTR ERV1 0 447 227 3 625 659 93 84 0 chrX 5334543 5334650 -161315646 - LTRIS5 LTR ERV1 -331 116 1 3 625 4784 152 36 52 chrX 5334652 5334977 -161315319 - RMER17C-int LTR ERVK -1140 2098 1783 3 625 2928 130 7 176 chrX 5334977 5335659 -161314637 - RMER2 LTR ERV1 0 567 1 3 625 4784 152 36 52 chrX 5335659 5336325 -161313971 - RMER17C-int LTR ERVK -1456 1782 1123 3 625 522 185 7 106 chrX 5336294 5336445 -161313851 - RMER17C-int LTR ERVK -2006 1232 1097 3 625 459 268 72 80 chrX 5336733 5337009 -161313287 - RMER17C-int LTR ERVK -2437 801 528 3 625 894 229 110 51 chrX 5337028 5337363 -161312933 - RMER17C-int LTR ERVK -2871 367 13 3 625 823 197 69 46 chrX 5337369 5337616 -161312680 - RMER17C LTR ERVK -3 407 154 3 625 1052 100 0 6 chrX 5337616 5337777 -161312519 + (GAA)n Simple_repeat Simple_repeat 2 161 0 3 625 823 197 69 46 chrX 5337777 5337790 -161312506 - RMER17C LTR ERVK -257 153 141 3 625 771 208 12 30 chrX 5337792 5337956 -161312340 - RLTR13D5 LTR ERVK 0 1023 863 3 625 7735 71 1 0 chrX 5337961 5339709 -161310587 - L1_Mus1 LINE L1 0 6567 4819 3 625 1135 200 49 30 chrX 5339844 5339932 -161310364 + Lx9 LINE L1 6928 7012 -632 3 625 2254 236 138 11 chrX 5339932 5340584 -161309712 + RMER19A LTR ERVK 3 737 0 3 625 1135 200 49 30 chrX 5340584 5340799 -161309497 + Lx9 LINE L1 7013 7237 -407 3 625 2985 119 0 0 chrX 5340799 5341228 -161309068 - MT2B2 LTR ERVL -155 429 1 3 625 259 280 31 85 chrX 5341228 5341265 -161309031 - ORR1A3-int LTR MaLR -1350 613 584 3 625 2876 150 88 28 chrX 5341963 5342498 -161307798 + RMER2 LTR ERV1 1 567 0 3 625 342 0 0 0 chrX 5343663 5343701 -161306595 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 625 1168 88 0 6 chrX 5343831 5343991 -161306305 + B2_Mm2 SINE B2 3 161 -34 3 625 430 355 16 16 chrX 5344102 5344411 -161305885 + MuRRS4-int LTR ERV1 1300 1608 -3455 3 625 2286 117 3 3 chrX 5344413 5344738 -161305558 + ORR1A2 LTR MaLR 3 327 0 3 625 4405 174 86 21 chrX 5344738 5345715 -161304581 + ORR1A2-int LTR MaLR 1 1040 -923 3 625 5306 90 60 36 chrX 5345715 5346105 -161304191 - L1_Mus3 LINE L1 -178 6460 6027 3 625 2919 79 5 8 chrX 5346105 5346501 -161303795 - MTA_Mm LTR MaLR 0 396 2 3 625 26390 135 12 7 chrX 5346501 5351305 -161298991 - L1_Mus3 LINE L1 -612 6026 1231 3 625 4706 142 30 62 chrX 5351312 5352264 -161298032 - L1VL1 LINE L1 -5970 900 1 3 625 1645 173 18 19 chrX 5352265 5352692 -161297604 + L1_Mur1 LINE L1 1159 1585 -4301 3 625 408 113 0 0 chrX 5352694 5352756 -161297540 + Lx6 LINE L1 5055 5116 -764 3 625 1082 149 6 12 chrX 5352756 5352926 -161297370 - ORR1A3 LTR MaLR -157 169 1 3 625 806 60 8 17 chrX 5352926 5353044 -161297252 - ORR1A3-int LTR MaLR 0 1963 1847 3 625 874 176 29 98 chrX 5353069 5353346 -161296950 + Lx6 LINE L1 5191 5448 -432 3 625 384 22 0 0 chrX 5353410 5353455 -161296841 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 625 2938 210 45 67 chrX 5353625 5354374 -161295922 + Lx5 LINE L1 6316 7048 -2 3 625 2251 147 18 0 chrX 5354407 5354856 -161295440 + Lx6 LINE L1 5442 5955 -1505 3 625 4203 171 110 21 chrX 5354850 5356204 -161294092 - L1_Mur3 LINE L1 -3642 2238 781 3 625 4444 107 5 6 chrX 5356204 5356842 -161293454 + L1_Mus4 LINE L1 6000 6636 0 3 625 4203 204 34 17 chrX 5356842 5357294 -161293002 - L1_Mur3 LINE L1 -6948 780 308 3 625 860 217 13 13 chrX 5357866 5358020 -161292276 + RSINE1 SINE B4 12 165 0 3 625 330 203 85 0 chrX 5358084 5358143 -161292153 + RSINE1 SINE B4 72 135 -30 3 625 286 258 114 0 chrX 5358447 5358579 -161291717 - L1MDb LINE L1 -4182 2451 2305 3 625 451 267 92 39 chrX 5358605 5358940 -161291356 - L1MDb LINE L1 -5077 1463 1111 3 625 758 278 14 14 chrX 5359133 5359345 -161290951 - B3 SINE B2 -3 213 2 3 625 375 23 0 0 chrX 5359502 5359546 -161290750 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 625 2106 90 0 3 chrX 5359689 5359980 -161290316 + L1_Mus2 LINE L1 6276 6565 -1 3 625 312 27 0 0 chrX 5360028 5360065 -161290231 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 625 1071 269 23 26 chrX 5360094 5360441 -161289855 - Lx6 LINE L1 -170 7290 6945 3 625 305 247 11 11 chrX 5360447 5360541 -161289755 - L1MC3 LINE L1 -497 7288 7195 3 625 23829 44 2 0 chrX 5360667 5363757 -161286539 + L1Md_F3 LINE L1 2491 5585 -298 3 625 8043 40 3 0 chrX 5363758 5364737 -161285559 + L1Md_F3 LINE L1 5587 6568 -16 3 625 30654 84 15 1 chrX 5364751 5370076 -161280220 + L1Md_F2 LINE L1 184 5586 -297 3 625 7547 72 4 5 chrX 5370077 5371071 -161279225 + L1Md_F2 LINE L1 5588 6580 -2 3 625 498 325 46 84 chrX 5371583 5371883 -161278413 - B4 SINE B4 -18 274 6 3 625 431 370 65 15 chrX 5372065 5372389 -161277907 - L1MC3 LINE L1 -1005 6780 6441 3 625 218 156 0 22 chrX 5372409 5372455 -161277841 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 625 219 105 35 17 chrX 5372472 5372530 -161277766 + (TA)n Simple_repeat Simple_repeat 2 60 0 3 625 346 383 36 32 chrX 5372539 5372760 -161277536 - L1M5 LINE L1 -3410 2736 2515 3 625 371 292 23 34 chrX 5372789 5372966 -161277330 - L1MCa LINE L1 -3706 2858 2684 3 625 310 352 22 11 chrX 5373014 5373195 -161277101 - L1MCa LINE L1 -4126 2625 2443 3 78 311 265 45 71 chrX 5373882 5374150 -161276146 - L1MCa LINE L1 -4834 1917 1657 3 626 540 30 0 0 chrX 5374250 5374316 -161275980 + (TG)n Simple_repeat Simple_repeat 2 67 0 3 626 292 200 18 0 chrX 5374329 5374384 -161275912 - ID4 SINE ID -26 57 2 3 626 233 266 138 20 chrX 5374570 5374766 -161275530 - L1MCa LINE L1 -4852 1193 975 3 626 622 227 0 0 chrX 5374772 5374891 -161275405 - B1_Mur2 SINE Alu 0 149 31 3 626 229 224 10 124 chrX 5374820 5374917 -161275379 - RLTR25B LTR ERVK -529 499 414 3 626 246 191 16 16 chrX 5375155 5375219 -161275077 - L1MCa LINE L1 -5412 633 570 3 626 2695 43 6 0 chrX 5376664 5376990 -161273306 - L1_Mus1 LINE L1 0 6567 6240 3 626 818 206 8 1 chrX 5377116 5377264 -161273032 - ORR1C1 LTR MaLR -56 322 118 3 626 657 38 0 0 chrX 5377264 5377344 -161272952 + (GA)n Simple_repeat Simple_repeat 1 80 0 3 626 814 232 122 55 chrX 5377344 5377450 -161272846 - ORR1C1 LTR MaLR -212 117 2 3 626 22 35 0 0 chrX 5377945 5377974 -161272322 + AT_rich Low_complexity Low_complexity 1 29 0 4 626 293 357 10 0 chrX 5379711 5379809 -161270487 + Lx8 LINE L1 7210 7308 -165 4 626 369 0 0 0 chrX 5379926 5379967 -161270329 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 626 948 231 0 16 chrX 5380535 5380724 -161269572 + B3 SINE B2 20 205 -11 4 626 22 0 0 0 chrX 5380795 5380817 -161269479 + AT_rich Low_complexity Low_complexity 1 22 0 4 626 2216 99 48 0 chrX 5380911 5381223 -161269073 - ORR1A2 LTR MaLR 0 327 1 4 626 200 189 0 0 chrX 5381647 5381684 -161268612 + T-rich Low_complexity Low_complexity 2 38 0 4 626 835 126 8 0 chrX 5382603 5382730 -161267566 + URR1B DNA MER1_type 98 225 0 4 626 877 237 119 81 chrX 5382971 5383315 -161266981 + ORR1E LTR MaLR 1 357 -2 4 626 363 44 0 0 chrX 5383330 5383375 -161266921 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 626 504 336 61 26 chrX 5383749 5384003 -161266293 - MLT1G LTR MaLR -290 289 26 4 626 2536 67 6 0 chrX 5384003 5384331 -161265965 + L1_Mus1 LINE L1 6231 6560 -7 4 626 7596 74 30 0 chrX 5384478 5386074 -161264222 + L1_Mus1 LINE L1 4903 6567 0 4 626 5352 114 5 22 chrX 5386078 5386604 -161263692 + Lx LINE L1 5447 5961 -693 4 626 902 96 74 0 chrX 5386604 5386739 -161263557 + B1_Mm SINE Alu 3 147 0 4 626 5352 147 28 98 chrX 5386739 5387497 -161262799 + Lx LINE L1 5962 6652 -2 4 626 345 269 113 21 chrX 5388224 5388252 -161262044 + L1MA8 LINE L1 5871 5900 -391 4 626 2352 144 70 5 chrX 5388252 5388622 -161261674 + ORR1B1 LTR MaLR 1 394 0 4 626 516 274 91 38 chrX 5388622 5388832 -161261464 + L1MA8 LINE L1 5906 6131 -160 4 626 1854 272 16 47 chrX 5389293 5389806 -161260490 + Lx5 LINE L1 6547 7043 -7 4 626 332 182 45 8 chrX 5389948 5390081 -161260215 + (TA)n Simple_repeat Simple_repeat 2 139 0 4 626 247 197 109 5 chrX 5391147 5391331 -161258965 - RMER17D LTR ERVK -376 513 311 4 626 491 223 224 30 chrX 5391337 5391471 -161258825 + B3 SINE B2 44 203 -13 4 626 2463 80 9 58 chrX 5391569 5391913 -161258383 - ORR1A2 LTR MaLR 0 327 1 4 626 26 30 0 0 chrX 5391913 5391946 -161258350 + AT_rich Low_complexity Low_complexity 1 33 0 4 626 231 307 8 95 chrX 5392086 5392212 -161258084 - MLT1A0 LTR MaLR -245 120 6 4 626 538 301 13 161 chrX 5395189 5395359 -161254937 - MTE-int LTR MaLR -1287 293 133 4 626 806 234 40 53 chrX 5395359 5395585 -161254711 + ID_B1 SINE B4 2 224 0 4 626 538 301 13 161 chrX 5395585 5395719 -161254577 - MTE-int LTR MaLR -1448 132 34 4 626 1213 286 12 97 chrX 5395731 5396145 -161254151 - MTEa LTR MaLR 0 379 1 4 626 387 0 0 0 chrX 5396277 5396320 -161253976 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 626 717 230 22 29 chrX 5396322 5396461 -161253835 - RSINE1 SINE B4 -25 140 3 4 626 207 0 0 0 chrX 5396519 5396542 -161253754 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 4 626 538 242 31 46 chrX 5396564 5396694 -161253602 - B1_Mur3 SINE Alu -21 128 1 4 626 1034 213 64 0 chrX 5396751 5396953 -161253343 - B3 SINE B2 -1 215 1 4 626 2144 276 99 42 chrX 5397332 5398168 -161252128 - Lx8 LINE L1 -349 7124 6241 4 626 329 344 16 0 chrX 5398388 5398516 -161251780 - Lx7 LINE L1 -1772 5924 5795 4 626 633 284 155 2 chrX 5398498 5398822 -161251474 - Lx7 LINE L1 -1854 4286 3891 4 626 9129 70 2 4 chrX 5398816 5399991 -161250305 - L1_Mm LINE L1 -68 5815 4644 4 626 2324 304 83 64 chrX 5400042 5400524 -161249772 - Lx7 LINE L1 -2157 3723 3230 4 626 898 105 12 50 chrX 5400524 5400685 -161249611 - L1_Mus3 LINE L1 -6 6632 6478 4 626 2324 304 83 64 chrX 5400685 5400865 -161249431 - Lx7 LINE L1 -2651 3229 3071 4 626 537 16 0 0 chrX 5400865 5400927 -161249369 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 626 2324 304 83 64 chrX 5400927 5402408 -161247888 - Lx7 LINE L1 -2810 3070 1538 4 626 447 300 9 0 chrX 5402409 5402519 -161247777 + B3 SINE B2 1 111 -105 4 626 238 295 117 35 chrX 5402530 5402727 -161247569 - Lx7 LINE L1 -4332 1548 1336 4 626 21 57 0 0 chrX 5402959 5402994 -161247302 + AT_rich Low_complexity Low_complexity 1 35 0 4 626 13671 27 0 4 chrX 5404964 5406558 -161243738 + L1Md_T LINE L1 4000 5586 -297 4 626 9524 8 0 0 chrX 5406558 5407554 -161242742 + L1Md_T LINE L1 5587 6582 0 4 626 1003 199 56 45 chrX 5410219 5410282 -161240014 - MT2A LTR ERVL -2 531 475 4 626 1052 220 20 0 chrX 5410282 5410482 -161239814 + B3 SINE B2 2 205 -11 4 626 1003 199 56 45 chrX 5410482 5410687 -161239609 - MT2A LTR ERVL -59 474 260 4 626 363 157 43 0 chrX 5410729 5410799 -161239497 - MERVL_2A-int LTR ERVL -463 5298 5226 4 626 4189 137 51 54 chrX 5410799 5411579 -161238717 + L1_Mur3 LINE L1 2084 2861 -3019 4 626 5006 147 25 14 chrX 5411579 5412354 -161237942 + Lx4A LINE L1 6275 7057 -1 4 626 22 0 0 0 chrX 5412354 5412376 -161237920 + AT_rich Low_complexity Low_complexity 1 22 0 4 626 1086 119 0 0 chrX 5412390 5412533 -161237763 + B1_Mus1 SINE Alu 1 143 -5 4 626 533 15 15 0 chrX 5412537 5412603 -161237693 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 4 626 949 137 0 12 chrX 5412611 5412781 -161237515 + (GGGA)n Simple_repeat Simple_repeat 3 170 0 4 626 7696 206 66 64 chrX 5412783 5414642 -161235654 + Lx6 LINE L1 5599 7460 0 4 626 516 32 0 0 chrX 5414682 5414744 -161235552 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 626 647 224 13 56 chrX 5414744 5414911 -161235385 + B3A SINE B2 33 174 -21 4 626 947 276 9 5 chrX 5414911 5415126 -161235170 + B3 SINE B2 1 216 0 4 626 317 235 21 177 chrX 5415126 5415148 -161235148 + B2_Mm2 SINE B2 175 193 -2 4 626 692 214 61 0 chrX 5416159 5416290 -161234006 + B1_Mus1 SINE Alu 1 139 -9 4 626 239 302 17 78 chrX 5416303 5416418 -161233878 - RMER5 LTR ERV1 -36 498 391 4 626 7549 72 16 10 chrX 5416514 5417503 -161232793 - L1Md_F2 LINE L1 -1 6581 5587 4 626 1491 218 124 44 chrX 5417574 5417962 -161232334 + MTD LTR MaLR 1 419 0 4 626 2176 256 65 7 chrX 5418350 5419058 -161231238 - L1_Mur3 LINE L1 -972 4908 4160 4 626 2993 225 40 28 chrX 5419059 5419858 -161230438 + L1_Rod LINE L1 4848 5656 -191 4 626 1095 323 42 19 chrX 5420341 5420818 -161229478 - MER52-int LTR ERV1 -950 6141 5654 4 626 597 240 161 30 chrX 5421145 5421537 -161228759 - MT2A LTR ERVL -107 477 1 4 626 226 154 0 0 chrX 5421542 5421581 -161228715 - ORR1A3-int LTR MaLR -4 1254 1216 4 626 310 225 100 0 chrX 5421581 5421661 -161228635 - MERVL_2A-int LTR ERVL -54 5707 5620 4 626 239 234 49 49 chrX 5421662 5421743 -161228553 - ORR1A3-int LTR MaLR -1339 624 544 4 626 1176 122 64 59 chrX 5421743 5421790 -161228506 - MERVL_2A-int LTR ERVL -153 5608 5572 4 626 1426 91 0 16 chrX 5421790 5421979 -161228317 + B2_Mm2 SINE B2 1 186 -9 4 626 1176 122 64 59 chrX 5421979 5422167 -161228129 - MERVL_2A-int LTR ERVL -190 5571 5372 4 626 1352 159 30 8 chrX 5422168 5422402 -161227894 - MTC LTR MaLR -4 417 179 4 626 822 236 66 17 chrX 5422437 5422618 -161227678 - MTC LTR MaLR -169 190 1 4 626 655 253 0 12 chrX 5422623 5422787 -161227509 - MTC-int LTR MaLR -7 1363 1202 4 626 749 67 10 0 chrX 5422804 5422908 -161227388 + (TC)n Simple_repeat Simple_repeat 2 106 0 4 626 188 209 47 0 chrX 5424959 5425002 -161225294 + L3 LINE CR1 3649 3693 -796 4 626 1691 256 29 10 chrX 5425249 5425660 -161224636 + MTD LTR MaLR 1 419 0 4 626 2543 214 33 129 chrX 5425710 5426621 -161223675 + RMER17B LTR ERVK 1 823 -135 4 626 195 129 0 0 chrX 5426956 5426987 -161223309 + (A)n Simple_repeat Simple_repeat 1 31 0 4 626 1285 165 23 5 chrX 5427417 5427636 -161222660 - Lx5 LINE L1 -609 6441 6219 4 626 3569 168 61 8 chrX 5427636 5428223 -161222073 + Lx5 LINE L1 6431 7048 -2 4 626 830 221 78 49 chrX 5429025 5429230 -161221066 - B3 SINE B2 -3 213 3 4 626 1628 242 91 17 chrX 5429230 5429641 -161220655 - MMAR1 DNA Mariner -719 567 126 4 626 2088 56 0 0 chrX 5429680 5429929 -161220367 + L1Md_A LINE L1 6334 6582 0 4 626 2646 205 38 89 chrX 5429964 5430624 -161219672 - RLTR26 LTR ERVK -16 626 1 4 626 374 292 18 0 chrX 5430624 5430736 -161219560 - MMAR1 DNA Mariner -1167 119 6 4 626 340 340 53 67 chrX 5431762 5432046 -161218250 - L1MEf LINE L1 -5446 754 475 4 626 201 158 0 0 chrX 5432513 5432551 -161217745 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 626 2732 33 12 0 chrX 5432882 5433216 -161217080 + ORR1A0 LTR MaLR 1 338 -8 4 626 14933 53 7 1 chrX 5433220 5435001 -161215295 + ORR1A0-int LTR MaLR 1 1792 0 4 626 2720 71 18 9 chrX 5435001 5435344 -161214952 + ORR1A0 LTR MaLR 1 346 0 4 626 426 53 0 0 chrX 5436474 5436531 -161213765 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 626 258 271 21 0 chrX 5436565 5436661 -161213635 + (CAGA)n Simple_repeat Simple_repeat 3 100 0 4 626 387 149 0 0 chrX 5437945 5438019 -161212277 + (CAG)n Simple_repeat Simple_repeat 1 74 0 4 626 509 197 244 58 chrX 5438978 5439183 -161211113 + ORR1E LTR MaLR 1 243 -116 4 626 4708 262 70 35 chrX 5439307 5440798 -161209498 + MTE-int LTR MaLR 16 1558 -22 4 626 946 293 35 22 chrX 5440785 5441103 -161209193 + ORR1E LTR MaLR 38 359 0 4 626 987 207 32 142 chrX 5441202 5441455 -161208841 + URR1B DNA MER1_type 1 225 0 4 626 615 266 13 118 chrX 5442158 5442407 -161207889 + ORR1E LTR MaLR 138 421 0 4 626 694 258 45 18 chrX 5442521 5442874 -161207422 + MTD LTR MaLR 3 407 -12 4 626 719 138 7 0 chrX 5443043 5443181 -161207115 + (GA)n Simple_repeat Simple_repeat 2 140 0 4 626 949 203 32 142 chrX 5444003 5444256 -161206040 - URR1B DNA MER1_type 0 225 1 4 626 853 293 35 22 chrX 5444355 5444673 -161205623 - ORR1E LTR MaLR 0 359 38 4 626 4262 262 70 35 chrX 5444660 5446151 -161204145 - MTE-int LTR MaLR -22 1558 16 4 626 447 210 13 77 chrX 5446275 5446430 -161203866 - ORR1E LTR MaLR -116 243 99 4 626 387 149 0 0 chrX 5447439 5447513 -161202783 + (CTG)n Simple_repeat Simple_repeat 1 74 0 4 626 258 271 21 0 chrX 5448797 5448893 -161201403 + (TCTG)n Simple_repeat Simple_repeat 3 100 0 4 626 426 53 0 0 chrX 5448927 5448984 -161201312 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 626 262 350 29 7 chrX 5451038 5451176 -161199120 + L1MCb LINE L1 416 556 -5489 4 626 235 279 171 46 chrX 5451438 5451701 -161198595 + L1MCb LINE L1 1764 2059 -4692 4 626 1210 201 87 118 chrX 5451906 5452139 -161198157 - ORR1C1 LTR MaLR 0 378 181 4 626 255 61 0 0 chrX 5452139 5452172 -161198124 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 626 1210 201 87 118 chrX 5452172 5452328 -161197968 - ORR1C1 LTR MaLR -198 180 1 4 626 522 241 257 6 chrX 5452455 5452626 -161197670 + B3 SINE B2 3 216 0 4 626 303 314 44 0 chrX 5452935 5453072 -161197224 + L1MCb LINE L1 2732 2874 -3690 4 626 748 152 0 80 chrX 5453387 5453537 -161196759 - B1_Mus2 SINE Alu -1 146 9 5 626 23 0 0 0 chrX 5453679 5453702 -161196594 + AT_rich Low_complexity Low_complexity 1 23 0 5 626 1069 88 0 0 chrX 5453707 5453854 -161196442 + B2_Mm2 SINE B2 1 147 -48 5 626 3398 134 22 2 chrX 5454003 5454554 -161195742 + RMER19A LTR ERVK 1 562 -175 5 626 1001 254 27 8 chrX 5454571 5454833 -161195463 - RLTR20B1 LTR ERVK -17 546 280 5 626 8143 43 0 0 chrX 5454833 5455866 -161194430 - L1Md_T LINE L1 -6 6576 5544 5 626 8292 18 0 0 chrX 5455863 5456801 -161193495 + L1Md_T LINE L1 4585 5522 -361 5 626 745 248 23 41 chrX 5456801 5457020 -161193276 - RLTR20B1 LTR ERVK -252 282 68 5 626 1575 104 0 0 chrX 5457053 5457284 -161193012 + RMER19A LTR ERVK 507 737 0 5 626 3153 202 87 8 chrX 5457819 5458522 -161191774 + Lx5 LINE L1 5587 6322 -728 5 626 409 224 0 0 chrX 5458549 5458625 -161191671 + Lx6 LINE L1 6756 6831 -629 5 626 950 187 5 29 chrX 5458625 5458834 -161191462 - RMER10B LTR ERVL 0 398 195 5 626 649 253 57 103 chrX 5458837 5458858 -161191438 - RMER10B LTR ERVL -144 298 280 5 626 1224 67 0 0 chrX 5458858 5459038 -161191258 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 626 1044 201 24 47 chrX 5459038 5459316 -161190980 - RMER10B LTR ERVL -163 279 13 5 626 443 45 0 29 chrX 5459364 5459432 -161190864 - L1Md_F2 LINE L1 -1 6581 6516 5 626 693 216 185 81 chrX 5459497 5459909 -161190387 - RLTR19-int LTR ERVK -110 3128 2734 5 626 269 203 172 0 chrX 5459940 5460004 -161190292 - RLTR19-int LTR ERVK -2864 3273 3199 5 626 2101 199 74 44 chrX 5460014 5460653 -161189643 - RLTR19-int LTR ERVK -3130 3007 2428 5 626 5798 117 13 10 chrX 5460659 5460715 -161189581 - Lx LINE L1 -7 6647 6597 5 626 3460 161 112 6 chrX 5460715 5461341 -161188955 - RLTR17 LTR ERVK 0 692 1 5 626 5798 117 13 10 chrX 5461341 5462147 -161188149 - Lx LINE L1 -58 6596 5783 5 626 722 102 0 8 chrX 5462654 5462773 -161187523 + (TTC)n Simple_repeat Simple_repeat 2 119 0 5 626 12702 144 13 4 chrX 5463193 5465272 -161185024 - L1_Mm LINE L1 -86 5797 3700 5 626 7490 65 21 6 chrX 5465267 5466267 -161184029 - L1_Mus1 LINE L1 0 6567 5521 5 626 514 202 0 0 chrX 5466267 5466381 -161183915 - L1M4 LINE L1 -2390 3756 3643 5 626 16538 97 12 12 chrX 5466382 5469455 -161180841 - L1VL4 LINE L1 -290 3269 199 5 626 688 196 37 98 chrX 5470364 5470579 -161179717 - RMER10B LTR ERVL 0 398 197 5 626 1126 173 45 71 chrX 5470605 5470872 -161179424 - RMER10B LTR ERVL -134 264 5 5 626 1451 298 57 42 chrX 5470873 5471085 -161179211 + Lx5 LINE L1 6518 6740 -310 5 626 455 45 0 15 chrX 5471085 5471152 -161179144 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 5 626 1451 298 57 42 chrX 5471152 5471464 -161178832 + Lx5 LINE L1 6741 7050 0 5 626 465 0 46 0 chrX 5472882 5472947 -161177349 + (CAAA)n Simple_repeat Simple_repeat 1 68 0 5 626 2000 88 3 20 chrX 5473881 5474183 -161176113 - ORR1A2 LTR MaLR -28 299 3 5 626 279 235 40 48 chrX 5474184 5474309 -161175987 + L1M4c LINE L1 2210 2333 -4051 5 626 766 312 21 35 chrX 5474378 5474667 -161175629 - B4A SINE B4 -6 286 2 5 626 333 0 0 0 chrX 5474689 5474726 -161175570 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 5 626 1149 93 0 0 chrX 5474726 5474887 -161175409 - B2_Mm2 SINE B2 -34 161 1 5 626 858 258 150 36 chrX 5474938 5474965 -161175331 + ORR1D2 LTR MaLR 28 56 -314 5 626 2833 166 206 22 chrX 5474965 5475588 -161174708 - RMER19A LTR ERVK 0 737 1 5 626 858 258 150 36 chrX 5475588 5475866 -161174430 + ORR1D2 LTR MaLR 57 368 -2 5 626 7748 98 10 5 chrX 5475896 5477707 -161172589 - L1_Mus3 LINE L1 0 6638 4815 5 626 3688 237 37 10 chrX 5477780 5478763 -161171533 - Lx7 LINE L1 -1219 6477 5448 5 626 1844 259 41 15 chrX 5478758 5479217 -161171079 + Lx7 LINE L1 6501 6971 -725 5 626 2167 166 73 20 chrX 5479309 5479708 -161170588 + MTC LTR MaLR 2 421 0 5 626 4415 132 72 6 chrX 5479960 5480651 -161169645 - RMER19A LTR ERVK 0 737 1 5 626 256 220 55 23 chrX 5480956 5481059 -161169237 + L1M4c LINE L1 5185 5301 -1081 5 626 1237 154 53 0 chrX 5481063 5481290 -161169006 + RLTR42 LTR ERVK 1 239 0 5 626 560 238 172 23 chrX 5481372 5481634 -161168662 + RMER10A LTR ERVL 122 422 -20 5 626 1035 211 21 17 chrX 5482176 5482412 -161167884 + RMER5 LTR ERV1 1 237 -297 5 626 34 42 0 0 chrX 5483312 5483360 -161166936 + AT_rich Low_complexity Low_complexity 1 48 0 5 626 274 221 0 0 chrX 5483360 5483428 -161166868 + L1M4c LINE L1 5513 5580 -796 5 626 740 267 48 24 chrX 5483410 5483659 -161166637 + L1_Mur3 LINE L1 6 260 -7452 5 626 525 274 162 22 chrX 5484050 5484229 -161166067 + RodERV21-int LTR ERV1 4 207 -4784 5 626 294 270 80 80 chrX 5484225 5484426 -161165870 + RodERV21-int LTR ERV1 466 666 -4325 5 626 37 0 0 0 chrX 5484769 5484806 -161165490 + AT_rich Low_complexity Low_complexity 1 37 0 5 626 553 78 33 11 chrX 5484958 5485049 -161165247 + (TTTTC)n Simple_repeat Simple_repeat 3 95 0 5 626 1124 77 0 0 chrX 5485054 5485197 -161165099 - B1_Mus1 SINE Alu -1 147 5 5 626 225 307 11 22 chrX 5485530 5485620 -161164676 + (CATATA)n Simple_repeat Simple_repeat 2 90 0 5 626 461 186 63 75 chrX 5485830 5486004 -161164292 + MYSERV-int LTR ERVK 5339 5510 -1040 5 626 817 211 62 62 chrX 5486226 5486369 -161163927 + MYSERV6-int LTR ERVK 1870 2006 -3516 5 626 1437 34 79 0 chrX 5486369 5486385 -161163911 - B2_Mm1t SINE B2 -2 191 176 5 626 243 0 0 0 chrX 5486385 5486412 -161163884 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 5 626 1437 34 79 0 chrX 5486412 5486572 -161163724 - B2_Mm1t SINE B2 -18 175 2 5 626 1654 269 72 62 chrX 5486572 5488047 -161162249 + MYSERV6-int LTR ERVK 8085 8721 -238 5 626 571 202 0 9 chrX 5488047 5488152 -161162144 - LSU-rRNA_Hsa rRNA rRNA -730 4305 4202 5 626 675 235 79 64 chrX 5488152 5488493 -161161803 + MYSERV6-int LTR ERVK 2624 2801 -437 5 626 10647 62 7 1 chrX 5488502 5489852 -161160444 + L1Md_F2 LINE L1 4230 5586 -297 5 626 8232 45 6 2 chrX 5489852 5490844 -161159452 + L1Md_F2 LINE L1 5587 6582 0 5 626 2543 142 113 33 chrX 5490852 5491399 -161158897 + L1_Mur3 LINE L1 3320 3910 -1970 5 626 3245 64 0 0 chrX 5491395 5491801 -161158495 - L1_Mm LINE L1 -711 5172 4767 5 626 324 0 0 0 chrX 5491836 5491872 -161158424 + (TAAAA)n Simple_repeat Simple_repeat 4 39 0 5 626 467 104 0 0 chrX 5491882 5491949 -161158347 + L1_Mur3 LINE L1 3894 3960 -1920 5 626 1361 232 73 26 chrX 5491978 5492430 -161157866 - RMER2 LTR ERV1 -53 514 2 5 626 1818 112 71 10 chrX 5492431 5492728 -161157568 + L1_Mur3 LINE L1 3961 4275 -1605 5 626 1163 241 128 6 chrX 5492728 5493041 -161157255 + Lx6 LINE L1 6972 7322 -138 5 626 518 276 110 44 chrX 5493055 5493237 -161157059 - Lx5 LINE L1 0 7050 6857 5 626 624 207 57 0 chrX 5493236 5493376 -161156920 + Lx6 LINE L1 7313 7460 0 5 626 518 298 109 26 chrX 5493402 5493750 -161156546 + L1M3 LINE L1 5384 5760 -423 5 626 265 266 32 0 chrX 5493772 5493866 -161156430 - Charlie1a DNA MER1_type -1291 164 68 5 626 208 136 51 0 chrX 5494630 5494689 -161155607 + (TCTCTG)n Simple_repeat Simple_repeat 6 67 0 5 626 522 0 0 0 chrX 5495039 5495097 -161155199 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 626 463 229 36 9 chrX 5496096 5496206 -161154090 - B1F1 SINE Alu -35 114 2 5 626 662 236 27 14 chrX 5497568 5497714 -161152582 + B1_Mur1 SINE Alu 1 148 -1 5 626 808 145 57 21 chrX 5497721 5497862 -161152434 + B1_Mur4 SINE Alu 5 150 0 5 626 254 382 0 0 chrX 5498290 5498379 -161151917 + PB1D9 SINE Alu 1 89 -31 5 626 761 192 14 7 chrX 5498376 5498523 -161151773 + B3 SINE B2 68 215 -1 5 626 234 0 0 0 chrX 5499252 5499278 -161151018 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 626 2147 121 106 22 chrX 5499299 5499705 -161150591 + RMER10A LTR ERVL 1 440 -2 5 626 257 375 12 0 chrX 5499810 5499890 -161150406 - ID2 SINE ID -2 81 1 5 626 233 299 10 0 chrX 5499903 5500000 -161150296 - L1MA8 LINE L1 -12 6279 6182 5 626 258 105 0 0 chrX 5500024 5500062 -161150234 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 626 826 220 170 45 chrX 5500331 5500578 -161149718 - MTE2a LTR MaLR 0 379 102 2 626 544 161 0 0 chrX 5500577 5500658 -161149638 - RMER10A LTR ERVL -361 81 1 3 626 953 217 75 105 chrX 5500886 5501530 -161148766 - RLTR19-int LTR ERVK -2175 3962 3526 4 626 844 163 7 39 chrX 5501549 5501702 -161148594 - B1_Mur3 SINE Alu 0 149 2 5 626 1742 230 66 48 chrX 5502036 5502888 -161147408 - MYSERV-int LTR ERVK -312 6238 5517 6 626 576 42 0 0 chrX 5503221 5503292 -161147004 + (TC)n Simple_repeat Simple_repeat 1 71 0 7 626 249 135 0 0 chrX 5503322 5503374 -161146922 + (T)n Simple_repeat Simple_repeat 1 52 0 8 626 699 147 12 62 chrX 5504237 5504397 -161145899 - RMER10A LTR ERVL -70 372 221 9 626 1370 141 68 24 chrX 5504405 5504653 -161145643 - RMER10A LTR ERVL -180 262 4 9 78 2961 62 23 3 chrX 5504663 5505052 -161145244 - L1_Mus3 LINE L1 -11 6627 6231 1 627 2316 42 32 32 chrX 5505053 5505369 -161144927 + RLTR1B LTR ERV1 8 323 -189 1 627 6955 40 8 3 chrX 5505370 5506223 -161144073 + L1Md_F2 LINE L1 5714 6570 -12 1 627 1266 114 0 11 chrX 5506408 5506594 -161143702 + RLTR1B LTR ERV1 329 512 0 1 627 1277 36 54 0 chrX 5506594 5506760 -161143536 - L1_Mus3 LINE L1 -415 6221 6047 1 627 414 0 0 0 chrX 5506974 5507020 -161143276 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 627 642 246 0 48 chrX 5507055 5507200 -161143096 - ID_B1 SINE B4 -5 219 82 1 627 423 318 78 30 chrX 5507228 5507458 -161142838 - L1MC4a LINE L1 -226 7656 7416 1 627 455 277 0 4 chrX 5507562 5507677 -161142619 + Lx7 LINE L1 5594 5706 -948 1 627 509 259 194 9 chrX 5507689 5507755 -161142541 + Lx8 LINE L1 6102 6173 -1300 1 627 279 0 0 0 chrX 5507755 5507786 -161142510 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 627 564 15 0 0 chrX 5507786 5507850 -161142446 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 627 509 259 194 9 chrX 5507850 5508004 -161142292 + Lx8 LINE L1 6174 6363 -1110 1 627 1113 273 59 31 chrX 5508009 5508326 -161141970 + Lx8 LINE L1 6519 6852 -621 1 627 2497 129 39 17 chrX 5508326 5508736 -161141560 - MTC LTR MaLR 0 421 3 2 627 1113 273 59 31 chrX 5508736 5508773 -161141523 + Lx8 LINE L1 6853 6883 -590 1 627 597 181 0 37 chrX 5509107 5509216 -161141080 - PB1D9 SINE Alu -1 119 15 2 627 2081 234 135 72 chrX 5509219 5510069 -161140227 - RMER13B LTR ERVK -4 904 1 2 627 22 0 0 0 chrX 5510094 5510116 -161140180 + AT_rich Low_complexity Low_complexity 1 22 0 2 627 2079 186 26 19 chrX 5511253 5511669 -161138627 - MTD LTR MaLR 0 419 1 2 627 1028 267 37 20 chrX 5512730 5513024 -161137272 + Lx8 LINE L1 6886 7184 -289 1 627 388 228 17 9 chrX 5513217 5513332 -161136964 - L1MC4 LINE L1 -993 7049 6934 2 627 784 182 5 124 chrX 5513337 5513531 -161136765 - RMER19B LTR ERVK 0 902 732 2 627 222 306 0 0 chrX 5513533 5513582 -161136714 + ID4 SINE ID 34 82 -1 2 627 324 0 0 0 chrX 5514000 5514036 -161136260 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 627 705 151 0 0 chrX 5514036 5514188 -161136108 + GA-rich Low_complexity Low_complexity 1 152 0 2 627 841 229 24 121 chrX 5515031 5515243 -161135053 + L1MD2 LINE L1 3980 4192 -1948 3 627 787 228 161 0 chrX 5515243 5515423 -161134873 + B3 SINE B2 2 210 -6 3 627 841 229 24 121 chrX 5515423 5515583 -161134713 + L1MD2 LINE L1 4193 4316 -1824 3 627 757 222 0 0 chrX 5515595 5515730 -161134566 + B1_Mur1 SINE Alu 2 136 -13 3 627 691 278 103 24 chrX 5515759 5516139 -161134157 + L1MD2 LINE L1 4320 4729 -1411 3 627 564 311 48 32 chrX 5516432 5516459 -161133837 - B4A SINE B4 -2 290 267 3 627 530 99 11 0 chrX 5516459 5516550 -161133746 + (TG)n Simple_repeat Simple_repeat 1 92 0 3 627 564 311 48 32 chrX 5516550 5516711 -161133585 - B4A SINE B4 -26 266 99 3 627 375 214 38 38 chrX 5516715 5516846 -161133450 - Lx4B LINE L1 0 7058 6928 3 627 321 260 38 11 chrX 5516955 5517095 -161133201 - Lx4A LINE L1 -23 7035 6894 3 627 241 307 0 0 chrX 5517084 5517159 -161133137 + Lx2B LINE L1 6691 6765 -235 3 627 387 280 32 0 chrX 5517159 5517252 -161133044 - B4A SINE B4 -196 96 1 3 627 414 347 29 44 chrX 5517276 5517481 -161132815 + MLT1B LTR MaLR 185 386 -4 3 627 410 257 281 9 chrX 5517498 5517726 -161132570 + L1MD LINE L1 4421 4710 -1436 3 627 724 274 35 0 chrX 5517735 5517936 -161132360 + B3 SINE B2 3 210 -6 4 627 248 255 40 40 chrX 5518013 5518178 -161132118 + L1MD2 LINE L1 4770 4936 -1210 3 627 206 128 0 25 chrX 5518189 5518229 -161132067 + GA-rich Low_complexity Low_complexity 1 39 0 4 627 386 277 83 28 chrX 5518305 5518410 -161131886 + L1MD2 LINE L1 5193 5299 -847 3 627 1235 41 0 0 chrX 5518410 5518555 -161131741 + B1_Mus1 SINE Alu 2 146 -2 4 627 386 277 83 28 chrX 5518555 5518594 -161131702 + L1MD2 LINE L1 5300 5345 -801 3 627 245 65 65 0 chrX 5518594 5518640 -161131656 + (CAAAAA)n Simple_repeat Simple_repeat 4 52 0 4 627 353 284 269 19 chrX 5518694 5519110 -161131186 + L1MD2 LINE L1 5363 5882 -477 3 627 495 313 47 75 chrX 5519161 5519375 -161130921 - B3 SINE B2 0 216 9 4 627 1460 64 0 47 chrX 5519502 5519716 -161130580 + L1_Mus1 LINE L1 6364 6567 0 4 627 561 161 34 0 chrX 5519806 5519924 -161130372 - Lx9 LINE L1 -5 7639 7518 4 627 409 194 63 21 chrX 5519924 5520066 -161130230 - Lx9 LINE L1 -214 7430 7283 4 627 5865 213 94 31 chrX 5520075 5520590 -161129706 - Lx9 LINE L1 -1409 6235 5534 4 627 450 0 0 0 chrX 5520590 5520640 -161129656 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 4 627 5865 201 90 33 chrX 5520640 5521232 -161129064 - Lx9 LINE L1 -314 5533 4912 4 627 1874 152 98 14 chrX 5521232 5521580 -161128716 + ORR1C1 LTR MaLR 2 378 0 4 627 5865 201 90 33 chrX 5521580 5522383 -161127913 - Lx9 LINE L1 -936 4911 4083 4 627 5976 57 14 5 chrX 5522383 5523148 -161127148 + L1Md_F2 LINE L1 5799 6570 -12 4 627 5865 201 90 33 chrX 5523148 5523239 -161127057 - Lx9 LINE L1 -1765 4082 3981 4 627 486 0 0 0 chrX 5523239 5523293 -161127003 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 627 2368 186 66 47 chrX 5523300 5524238 -161126058 - Lx9 LINE L1 -3933 1914 960 4 627 652 151 415 0 chrX 5524238 5524390 -161125906 - B3 SINE B2 0 216 2 5 627 2313 178 58 91 chrX 5524390 5524616 -161125680 - Lx9 LINE L1 -6649 959 737 4 627 593 255 126 11 chrX 5524731 5524921 -161125375 - B3 SINE B2 -4 212 1 5 627 678 287 68 19 chrX 5524930 5525136 -161125160 - B3 SINE B2 0 216 1 5 627 603 280 0 0 chrX 5525334 5525466 -161124830 + B1_Mur1 SINE Alu 12 143 -6 5 627 230 260 26 52 chrX 5525627 5525704 -161124592 + MLT2E LTR ERVL 67 141 -487 5 627 371 233 106 7 chrX 5525722 5525873 -161124423 + L1MC4 LINE L1 6895 7060 -982 5 627 29 0 0 0 chrX 5525892 5525921 -161124375 + AT_rich Low_complexity Low_complexity 1 29 0 5 627 508 315 81 5 chrX 5525975 5526160 -161124136 - MT2A LTR ERVL 0 533 335 5 627 189 0 0 0 chrX 5526189 5526210 -161124086 + (CAA)n Simple_repeat Simple_repeat 2 22 0 5 627 377 280 9 48 chrX 5526218 5526323 -161123973 + B3A SINE B2 87 187 -11 6 627 3894 84 18 21 chrX 5526330 5526901 -161123395 - RLTR13D1 LTR ERVK -11 795 227 6 627 3028 160 27 2 chrX 5526882 5527402 -161122894 - RLTR13D1 LTR ERVK -369 533 1 6 627 22 0 0 0 chrX 5527801 5527823 -161122473 + AT_rich Low_complexity Low_complexity 1 22 0 6 627 228 281 55 22 chrX 5530541 5530632 -161119664 + RLTR22_Mur LTR ERVK 1307 1400 -448 6 627 277 208 36 98 chrX 5531050 5531162 -161119134 - MLT1A1 LTR MaLR 0 408 304 6 627 1130 177 91 22 chrX 5531230 5531461 -161118835 + RLTR13D2 LTR ERVK 1 247 -559 6 627 3361 112 14 12 chrX 5531441 5531956 -161118340 + RLTR13D2 LTR ERVK 508 1023 0 6 627 5574 81 21 0 chrX 5532111 5532863 -161117433 - Lx3_Mus LINE L1 -9 7000 6233 6 627 1309 56 1 3 chrX 5533247 5533428 -161116868 + L1Md_F2 LINE L1 5376 5586 -297 6 627 8478 27 5 3 chrX 5533428 5534422 -161115874 + L1Md_F2 LINE L1 5587 6582 0 6 627 495 271 142 87 chrX 5534457 5534837 -161115459 - RMER10A LTR ERVL -13 429 29 6 627 1074 297 73 34 chrX 5535574 5536132 -161114164 - MER63D DNA AcHobo -419 642 63 6 627 469 193 0 0 chrX 5536205 5536293 -161114003 + ORR1C2 LTR MaLR 270 357 -27 7 627 784 164 8 0 chrX 5536301 5536435 -161113861 - Lx5 LINE L1 -143 6907 6773 7 627 585 329 26 53 chrX 5536455 5536683 -161113613 - MTD LTR MaLR -185 234 13 7 627 310 339 8 8 chrX 5536918 5537037 -161113259 + MIRb SINE MIR 114 232 -36 7 627 189 394 37 28 chrX 5538323 5538430 -161111866 - L2b LINE L2 -224 3151 3044 7 627 294 160 0 0 chrX 5538496 5538546 -161111750 + MTEa LTR MaLR 1 50 -329 7 627 240 309 15 0 chrX 5538581 5538649 -161111647 - MTC LTR MaLR -352 69 1 7 627 399 236 37 130 chrX 5539317 5539478 -161110818 - RMER15 LTR ERVL -78 497 352 7 627 298 290 0 0 chrX 5539621 5539683 -161110613 + MTEa LTR MaLR 44 105 -274 7 627 1574 241 62 22 chrX 5539789 5540192 -161110104 + MTD LTR MaLR 1 419 0 7 627 244 276 28 87 chrX 5541371 5541657 -161108639 - RMER17D LTR ERVK -359 530 262 7 627 333 307 74 46 chrX 5541875 5542204 -161108092 + Lx9 LINE L1 5800 6137 -1559 8 627 238 286 18 0 chrX 5542333 5542389 -161107907 - ID4 SINE ID -2 81 25 8 627 324 0 0 0 chrX 5542810 5542846 -161107450 + (TTA)n Simple_repeat Simple_repeat 2 37 0 8 627 423 0 0 0 chrX 5543968 5544015 -161106281 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 627 358 346 60 63 chrX 5544481 5544799 -161105497 + L1MEf LINE L1 475 791 -5409 8 627 429 138 0 0 chrX 5545004 5545098 -161105198 + (TG)n Simple_repeat Simple_repeat 2 95 0 8 627 348 328 76 120 chrX 5545219 5545444 -161104852 - B3A SINE B2 -1 215 1 8 627 24 67 0 0 chrX 5545581 5545626 -161104670 + AT_rich Low_complexity Low_complexity 1 45 0 8 627 244 221 0 56 chrX 5545810 5545882 -161104414 + A-rich Low_complexity Low_complexity 6 73 0 8 627 433 320 62 131 chrX 5546393 5546897 -161103399 + RLTR40 LTR ERVK 79 547 -270 8 627 1812 226 48 28 chrX 5547008 5547509 -161102787 - RCHARR1 DNA MER1_type -48 926 416 9 627 1092 232 39 23 chrX 5547523 5547779 -161102517 + B4A SINE B4 1 260 -32 9 627 1866 144 68 73 chrX 5547979 5548375 -161101921 + ORR1B1 LTR MaLR 1 394 0 9 627 1677 202 113 15 chrX 5548618 5549334 -161100962 + Lx6 LINE L1 5377 6168 -1528 9 627 438 53 0 0 chrX 5549399 5549456 -161100840 + (GA)n Simple_repeat Simple_repeat 2 58 0 9 627 1799 140 50 118 chrX 5549497 5549877 -161100419 - ORR1B1 LTR MaLR 0 394 41 9 627 4529 226 39 27 chrX 5549880 5550946 -161099350 + Lx6 LINE L1 6214 7291 -169 9 627 182 62 0 30 chrX 5551106 5551139 -161099157 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 9 627 24 100 0 0 chrX 5551326 5551406 -161098890 + AT_rich Low_complexity Low_complexity 1 80 0 9 627 274 338 27 48 chrX 5551453 5551599 -161098697 - LTR33B LTR ERVL -308 195 53 9 627 507 226 16 19 chrX 5551791 5551913 -161098383 - PB1D10 SINE Alu -6 111 1 9 627 234 0 0 0 chrX 5551920 5551946 -161098350 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1 627 491 90 13 0 chrX 5552069 5552147 -161098149 + (TC)n Simple_repeat Simple_repeat 1 79 0 1 627 343 336 9 9 chrX 5552168 5552191 -161098105 - LTR53 LTR ERVL -12 507 484 1 627 815 83 0 8 chrX 5552191 5552313 -161097983 + (GGGAGA)n Simple_repeat Simple_repeat 3 123 0 1 627 956 315 78 9 chrX 5552313 5552734 -161097562 - LTR53 LTR ERVL -36 483 34 1 627 650 306 84 37 chrX 5553863 5554162 -161096134 - MLT1A0 LTR MaLR -11 354 42 1 627 370 225 12 12 chrX 5554162 5554243 -161096053 + ID4_ SINE ID 3 83 0 1 627 567 0 0 0 chrX 5554581 5554644 -161095652 + (CTAAT)n Simple_repeat Simple_repeat 1 63 0 1 627 280 217 46 19 chrX 5554695 5554803 -161095493 + (TG)n Simple_repeat Simple_repeat 2 112 0 1 627 333 227 0 43 chrX 5554806 5554875 -161095421 - B4A SINE B4 -2 290 225 1 627 1813 180 239 27 chrX 5554871 5555310 -161094986 - RMER19C LTR ERVK -68 543 12 1 627 1868 268 48 50 chrX 5557197 5557842 -161092454 - Lx8 LINE L1 -293 7180 6537 1 627 1034 262 24 14 chrX 5557901 5558191 -161092105 + L1_Mur3 LINE L1 279 571 -7157 1 627 1865 122 9 85 chrX 5558191 5558613 -161091683 + L1_Mur3 LINE L1 2884 3273 -2607 1 627 469 111 12 12 chrX 5558653 5558735 -161091561 + RMER17C-int LTR ERVK 3152 3233 -5 1 627 552 226 52 107 chrX 5558747 5559071 -161091225 + RMER17C LTR ERVK 1 385 -25 1 627 1254 277 47 108 chrX 5559154 5559857 -161090439 - L1_Mur3 LINE L1 -1335 4545 3933 1 627 858 159 7 27 chrX 5559857 5560006 -161090290 - B1_Mus1 SINE Alu 0 148 3 1 627 1254 281 49 114 chrX 5560006 5560562 -161089734 - L1_Mur3 LINE L1 -1914 3933 3401 1 627 2802 287 69 15 chrX 5560689 5561714 -161088582 - Lx8 LINE L1 -136 7337 6257 1 627 562 176 29 29 chrX 5562321 5562426 -161087870 - B1_Mur4 SINE Alu -11 139 35 1 627 346 176 5 74 chrX 5562746 5562836 -161087460 - L1_Mur3 LINE L1 -2882 3264 3142 1 627 384 143 0 0 chrX 5562836 5562906 -161087390 + (TG)n Simple_repeat Simple_repeat 2 71 0 1 627 1386 256 76 31 chrX 5562928 5563331 -161086965 + MTC LTR MaLR 1 407 -14 1 627 297 194 9 75 chrX 5563417 5563523 -161086773 - L1_Rod LINE L1 -2910 2937 2839 1 627 190 265 20 0 chrX 5563795 5563844 -161086452 + MIRm SINE MIR 88 137 -139 1 627 363 44 0 0 chrX 5564258 5564303 -161085993 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 627 21 0 0 0 chrX 5564401 5564422 -161085874 + AT_rich Low_complexity Low_complexity 1 21 0 1 627 233 304 4 11 chrX 5564505 5564595 -161085701 - L2a LINE L2 0 3426 3288 1 627 21 36 0 0 chrX 5565929 5565957 -161084339 + AT_rich Low_complexity Low_complexity 1 28 0 1 627 226 194 0 0 chrX 5566843 5566879 -161083417 - B1F2 SINE Alu -102 47 12 1 627 457 320 56 63 chrX 5567153 5567437 -161082859 - B4A SINE B4 -10 282 1 1 627 521 268 26 18 chrX 5567469 5567583 -161082713 + ID_B1 SINE B4 86 200 -24 1 627 474 311 43 29 chrX 5567583 5567604 -161082692 + B1F1 SINE Alu 5 141 -8 1 627 7044 129 58 27 chrX 5567839 5569040 -161081256 + Lx4A LINE L1 5819 7057 -1 1 627 22 0 0 0 chrX 5569042 5569064 -161081232 + AT_rich Low_complexity Low_complexity 1 22 0 1 627 4089 80 2 14 chrX 5569271 5569828 -161080468 - L1Md_F2 LINE L1 -3 6579 6030 1 627 1315 67 0 0 chrX 5569828 5570007 -161080289 - L1_Mm LINE L1 -1564 4319 4141 1 627 5613 82 9 7 chrX 5570008 5570780 -161079516 + L1Md_F2 LINE L1 5806 6579 -3 1 627 17160 80 2 1 chrX 5570875 5573315 -161076981 + L1Md_F3 LINE L1 3145 5586 -297 1 627 8388 31 4 7 chrX 5573315 5574316 -161075980 + L1Md_F3 LINE L1 5587 6584 0 1 627 393 259 173 6 chrX 5574485 5574663 -161075633 - L1MA5 LINE L1 -369 5931 5706 1 627 408 224 0 0 chrX 5574712 5574810 -161075486 + (CATATA)n Simple_repeat Simple_repeat 3 100 0 1 627 439 302 122 24 chrX 5574825 5574862 -161075434 - L1M2 LINE L1 -276 5571 5534 1 627 2343 58 42 0 chrX 5574862 5575175 -161075121 - L1_Mus3 LINE L1 -2 6636 6311 1 627 490 288 95 19 chrX 5575175 5575751 -161074545 - L1M2 LINE L1 -726 5574 4900 1 627 2214 176 35 15 chrX 5575751 5576154 -161074142 + MTD LTR MaLR 1 411 -8 1 627 3631 226 152 33 chrX 5576176 5577284 -161073012 + MTD-int LTR MaLR 19 1258 0 1 627 1580 198 166 3 chrX 5577284 5577633 -161072663 + MTD LTR MaLR 1 406 -13 1 627 1561 306 83 41 chrX 5577634 5578854 -161071442 - L1M2 LINE L1 -1177 4966 3681 1 627 863 168 21 0 chrX 5578854 5578997 -161071299 + B1_Mur2 SINE Alu 1 146 -3 1 627 1561 306 83 41 chrX 5578997 5579154 -161071142 - L1M2 LINE L1 -2463 3680 3532 1 627 1848 264 33 27 chrX 5579157 5579643 -161070653 - MTE-int LTR MaLR -236 1344 856 1 627 800 296 26 66 chrX 5579632 5579903 -161070393 - ORR1E LTR MaLR -99 260 1 1 627 3210 157 11 11 chrX 5580116 5580645 -161069651 - RLTR17 LTR ERVK -163 529 1 1 627 1036 143 75 14 chrX 5580823 5581036 -161069260 + URR1A DNA MER1_type 1 226 0 1 627 188 86 29 0 chrX 5581599 5581634 -161068662 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1 627 1078 71 35 0 chrX 5583305 5583446 -161066850 - B1_Mus1 SINE Alu -1 147 2 1 627 1047 144 10 26 chrX 5583474 5583666 -161066630 + B2_Mm2 SINE B2 2 190 -5 1 627 405 267 0 11 chrX 5583973 5584064 -161066232 - PB1D7 SINE Alu -2 118 29 1 627 7214 170 22 33 chrX 5584064 5584358 -161065938 + Lx6 LINE L1 4327 4625 -1255 1 627 214 29 0 54 chrX 5584358 5584395 -161065901 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1 627 7214 209 33 22 chrX 5584395 5587188 -161063108 + Lx6 LINE L1 4626 7442 -18 1 627 234 0 0 0 chrX 5587190 5587216 -161063080 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1 627 6720 85 6 72 chrX 5587217 5589056 -161061240 - L1Md_F2 LINE L1 -23 6559 4844 1 627 1301 71 0 0 chrX 5589056 5589226 -161061070 + L1Md_T LINE L1 6411 6580 -2 1 627 563 42 0 0 chrX 5589228 5589299 -161060997 - L1_Mm LINE L1 -3620 2263 2193 1 627 7568 73 6 1 chrX 5589737 5591503 -161058793 - L1_Mus1 LINE L1 0 6567 4793 1 627 957 245 18 25 chrX 5591549 5591829 -161058467 - Lx2B LINE L1 -2 6998 6721 1 627 6826 99 43 21 chrX 5592498 5593544 -161056752 - Lx2 LINE L1 0 6997 5929 1 627 2735 269 130 28 chrX 5593564 5594714 -161055582 - Lx9 LINE L1 -20 7624 6357 1 627 432 82 0 0 chrX 5594727 5594788 -161055508 + (TCTCCC)n Simple_repeat Simple_repeat 6 66 0 1 627 4126 99 11 5 chrX 5594834 5595786 -161054510 + Lx4A LINE L1 5264 6234 -824 1 627 3637 124 57 8 chrX 5595786 5596396 -161053900 - RMER17B LTR ERVK 0 958 319 1 627 1010 8 0 0 chrX 5596396 5596514 -161053782 - L1Md_T LINE L1 -290 6292 6175 1 627 2337 45 0 0 chrX 5596514 5596800 -161053496 + L1Md_A LINE L1 6297 6582 0 1 627 2372 106 6 0 chrX 5596800 5597131 -161053165 - RMER17B LTR ERVK -625 333 1 1 627 1577 148 0 0 chrX 5597131 5597381 -161052915 + Lx4A LINE L1 6229 6478 -580 1 627 7184 72 38 1 chrX 5597388 5598402 -161051894 + L1_Mus3 LINE L1 5588 6638 0 1 627 379 259 215 26 chrX 5598391 5598898 -161051398 + L1M2 LINE L1 4148 4750 -1393 1 627 403 274 56 28 chrX 5598915 5599095 -161051201 + Lx9 LINE L1 5789 5973 -1671 1 627 322 270 113 13 chrX 5599815 5599965 -161050331 + L1MC4 LINE L1 6793 6957 -1085 1 627 455 190 31 101 chrX 5599991 5600120 -161050176 - ORR1D1 LTR MaLR -254 120 1 1 627 415 261 77 16 chrX 5600169 5600352 -161049944 + L1MA8 LINE L1 6010 6203 -88 1 627 271 255 112 84 chrX 5600834 5601009 -161049287 + MLT1E2 LTR MaLR 366 546 -78 1 627 14453 173 78 40 chrX 5601071 5604459 -161045837 - RLTR14-int LTR ERV1 -749 4568 1046 1 627 2079 140 30 3 chrX 5604459 5604796 -161045500 - ORR1A1 LTR MaLR 0 346 1 1 627 14453 175 60 41 chrX 5604796 5604894 -161045402 - RLTR14-int LTR ERV1 -4272 1045 949 1 627 7037 82 1 0 chrX 5605004 5606256 -161044040 + L1_Mus2 LINE L1 5313 6565 -1 1 627 1936 221 122 46 chrX 5606442 5606680 -161043616 - RLTR14-int LTR ERV1 -4665 652 434 1 627 468 0 0 0 chrX 5606680 5606732 -161043564 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 627 1936 221 122 46 chrX 5606732 5607099 -161043197 - RLTR14-int LTR ERV1 -4884 433 2 1 627 1745 169 101 3 chrX 5607099 5607425 -161042871 - RLTR14 LTR ERV1 -3 379 22 1 627 1289 284 84 77 chrX 5608025 5609137 -161041159 + Lx9 LINE L1 2538 3660 -2187 1 627 209 33 33 0 chrX 5609137 5609167 -161041129 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1 627 1289 284 84 77 chrX 5609167 5609256 -161041040 + Lx9 LINE L1 3661 3748 -2099 1 627 489 308 28 14 chrX 5609843 5610057 -161040239 + RMER1B Other Other 152 368 -698 1 627 2052 295 53 74 chrX 5610071 5611005 -161039291 + RMER1C Other Other 405 1319 -23 1 627 3089 270 70 21 chrX 5611027 5612445 -161037851 + Lx9 LINE L1 3749 5777 -1919 1 627 1439 208 63 6 chrX 5612471 5612786 -161037510 - Lx5 LINE L1 0 7050 6718 1 627 243 296 14 0 chrX 5612791 5612862 -161037434 + MTD LTR MaLR 23 94 -325 1 627 4515 167 60 7 chrX 5612889 5613732 -161036564 - Lx4A LINE L1 -193 6865 5978 1 627 1020 247 0 5 chrX 5613734 5613954 -161036342 + MTD LTR MaLR 103 321 -98 1 627 2166 317 44 70 chrX 5613956 5615423 -161034873 + Lx9 LINE L1 6185 7614 -30 1 627 402 335 93 42 chrX 5616264 5616479 -161033817 + B4 SINE B4 1 226 -66 1 627 486 0 0 0 chrX 5616484 5616538 -161033758 + (TAAAA)n Simple_repeat Simple_repeat 3 56 0 1 627 261 203 101 0 chrX 5616915 5616984 -161033312 + RSINE1 SINE B4 3 78 -87 1 627 2686 80 50 18 chrX 5617507 5617888 -161032408 - L1_Mus1 LINE L1 -2 6565 6173 1 627 432 0 0 0 chrX 5619409 5619457 -161030839 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 627 2843 74 0 0 chrX 5619649 5620012 -161030284 - L1_Mm LINE L1 -799 5084 4722 1 627 778 179 80 0 chrX 5620017 5620168 -161030128 + Lx3B LINE L1 6810 6972 -1 1 627 414 0 0 0 chrX 5620183 5620229 -161030067 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 627 333 227 0 0 chrX 5620247 5620313 -161029983 - 4.5SRNA scRNA scRNA -3 91 26 1 627 4876 158 38 72 chrX 5620339 5620801 -161029495 + Lx2B LINE L1 4905 5301 -576 1 627 4066 90 5 3 chrX 5620801 5621367 -161028929 - L1_Mus4 LINE L1 -16 6620 6054 1 627 7052 173 30 41 chrX 5621367 5623023 -161027273 + Lx2B LINE L1 5302 6996 -4 1 627 339 264 121 34 chrX 5623411 5623560 -161026736 + B4A SINE B4 2 163 -129 1 627 609 76 0 0 chrX 5623740 5623832 -161026464 + (CA)n Simple_repeat Simple_repeat 2 93 0 1 627 227 171 0 0 chrX 5624502 5624543 -161025753 + (CG)n Simple_repeat Simple_repeat 2 42 0 1 627 246 62 0 0 chrX 5624565 5624597 -161025699 + (CGG)n Simple_repeat Simple_repeat 3 34 0 1 627 26 30 0 0 chrX 5624748 5624781 -161025515 + GC_rich Low_complexity Low_complexity 1 33 0 1 627 228 100 0 0 chrX 5624800 5624840 -161025456 + (CCCCCG)n Simple_repeat Simple_repeat 5 44 0 1 627 228 35 0 0 chrX 5624994 5625023 -161025273 + (CGG)n Simple_repeat Simple_repeat 2 30 0 1 627 378 42 0 0 chrX 5625842 5625890 -161024406 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 627 480 35 0 0 chrX 5626122 5626180 -161024116 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 627 1041 337 5 18 chrX 5627318 5627714 -161022582 - Lx7 LINE L1 -377 7319 6929 2 627 559 244 19 6 chrX 5628514 5628675 -161021621 - RSINE1 SINE B4 0 165 3 2 627 38 51 0 0 chrX 5630867 5630926 -161019370 + AT_rich Low_complexity Low_complexity 1 59 0 2 627 210 37 0 0 chrX 5630981 5631008 -161019288 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2 627 708 189 111 19 chrX 5631641 5631857 -161018439 + L1MC5 LINE L1 7691 7926 -35 2 628 234 0 0 0 chrX 5636876 5636902 -161013394 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 628 590 281 14 38 chrX 5636911 5637122 -161013174 - B3 SINE B2 -9 207 2 2 628 648 189 15 38 chrX 5637253 5637385 -161012911 + B3 SINE B2 1 129 -87 2 628 4555 198 94 13 chrX 5637393 5638387 -161011909 + Lx5 LINE L1 5923 6996 -54 2 628 353 22 22 0 chrX 5638400 5638446 -161011850 + (TAA)n Simple_repeat Simple_repeat 2 48 0 2 628 846 131 0 0 chrX 5638456 5638586 -161011710 + B3 SINE B2 1 130 -86 2 628 246 32 0 0 chrX 5638678 5638709 -161011587 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 628 1025 269 128 0 chrX 5639038 5639373 -161010923 + MTE2a LTR MaLR 2 379 0 2 628 340 228 65 11 chrX 5639773 5639866 -161010430 + RSINE1 SINE B4 47 144 -21 2 628 387 0 0 0 chrX 5639872 5639915 -161010381 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 628 279 0 0 0 chrX 5639915 5639945 -161010351 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 628 957 250 0 0 chrX 5640070 5640270 -161010026 + Lx6 LINE L1 7068 7267 -193 2 628 558 0 0 0 chrX 5640296 5640358 -161009938 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 2 628 398 279 63 0 chrX 5640411 5640522 -161009774 + Lx7 LINE L1 7204 7321 -375 2 628 185 0 0 39 chrX 5640555 5640581 -161009715 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2 628 48 85 0 0 chrX 5640698 5640816 -161009480 + AT_rich Low_complexity Low_complexity 1 118 0 2 628 309 263 40 0 chrX 5641279 5641378 -161008918 - L1MA5 LINE L1 -3 6297 6195 2 628 297 248 49 63 chrX 5642889 5643031 -161007265 + L1_Rod LINE L1 928 1067 -6541 2 628 768 238 57 16 chrX 5643042 5643234 -161007062 - B3 SINE B2 -1 215 16 2 628 230 222 147 40 chrX 5643241 5643391 -161006905 + L1_Rod LINE L1 1054 1219 -6389 2 628 3071 250 95 24 chrX 5645614 5646780 -161003516 + L1_Rod LINE L1 1215 2463 -3384 2 628 2795 130 67 24 chrX 5646783 5647333 -161002963 + RMER6A LTR ERVK 183 756 0 2 628 1456 174 44 4 chrX 5647353 5647671 -161002625 + MTC LTR MaLR 1 340 -79 2 628 798 146 92 0 chrX 5647794 5647924 -161002372 - B1_Mur3 SINE Alu -7 142 1 2 628 346 342 0 44 chrX 5648013 5648172 -161002124 + ID_B1 SINE B4 73 224 0 2 628 442 278 8 23 chrX 5648044 5648173 -161002123 + B1F1 SINE Alu 23 149 0 2 628 214 246 0 28 chrX 5648990 5649061 -161001235 + A-rich Low_complexity Low_complexity 1 69 0 2 628 413 273 174 43 chrX 5649209 5649370 -161000926 + B3A SINE B2 1 182 -16 2 628 186 43 0 0 chrX 5649372 5649395 -161000901 + (CAGA)n Simple_repeat Simple_repeat 3 25 0 2 628 348 24 0 0 chrX 5649396 5649437 -161000859 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 628 1436 183 94 46 chrX 5649437 5649627 -161000669 + RMER15 LTR ERVL 15 204 -371 2 628 216 0 0 0 chrX 5649627 5649651 -161000645 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 628 1436 183 94 46 chrX 5649651 5649810 -161000486 + RMER15 LTR ERVL 205 380 -195 2 628 1375 268 43 21 chrX 5649811 5650234 -161000062 + Lx7 LINE L1 6858 7289 -407 2 628 235 203 0 28 chrX 5650375 5650446 -160999850 + Lx7 LINE L1 7611 7679 -17 2 628 299 321 26 18 chrX 5650517 5650631 -160999665 + B4 SINE B4 155 269 -23 2 628 450 0 0 0 chrX 5650635 5650685 -160999611 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 628 609 276 106 0 chrX 5651907 5652077 -160998219 - ID_B1 SINE B4 -36 188 1 2 628 210 243 75 75 chrX 5652556 5652636 -160997660 - MIRb SINE MIR -148 120 41 2 628 541 227 0 25 chrX 5652813 5652935 -160997361 + ID_B1 SINE B4 91 209 -15 2 628 543 237 115 0 chrX 5653345 5653484 -160996812 - RSINE1 SINE B4 -8 157 3 2 628 23 0 0 0 chrX 5653639 5653662 -160996634 + AT_rich Low_complexity Low_complexity 1 23 0 2 628 651 163 110 7 chrX 5653802 5653938 -160996358 - B1_Mur4 SINE Alu 0 150 1 2 628 287 303 0 13 chrX 5654798 5654875 -160995421 + ID4_ SINE ID 8 83 0 2 628 731 284 33 0 chrX 5654967 5655182 -160995114 + ID_B1 SINE B4 3 224 0 2 628 400 175 143 19 chrX 5655559 5655664 -160994632 - MTC LTR MaLR -9 412 295 2 628 293 156 0 0 chrX 5655726 5655771 -160994525 - MTC LTR MaLR -266 153 109 2 628 1097 103 7 0 chrX 5655773 5655918 -160994378 + B1_Mus2 SINE Alu 2 147 0 2 628 594 103 0 0 chrX 5655918 5656005 -160994291 + (GAAA)n Simple_repeat Simple_repeat 2 88 0 2 628 344 212 135 48 chrX 5656038 5656142 -160994154 - MTC LTR MaLR -303 118 6 2 628 321 219 53 40 chrX 5656552 5656649 -160993647 - PB1 SINE Alu -18 109 21 2 628 1080 68 7 7 chrX 5657351 5657498 -160992798 + B1_Mus1 SINE Alu 1 147 -1 2 628 225 269 0 29 chrX 5658024 5658093 -160992203 + CT-rich Low_complexity Low_complexity 1 67 0 2 628 22 70 0 0 chrX 5658336 5658379 -160991917 + AT_rich Low_complexity Low_complexity 1 43 0 2 628 225 294 58 10 chrX 5661523 5661626 -160988670 + PB1D10 SINE Alu 3 110 -7 2 628 261 98 0 0 chrX 5662209 5662250 -160988046 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 628 1171 182 124 7 chrX 5662270 5662545 -160987751 + ORR1C1 LTR MaLR 61 378 0 2 628 370 308 61 21 chrX 5662596 5662849 -160987447 + L1ME3A LINE L1 4225 4495 -1651 2 628 1278 228 46 46 chrX 5662928 5663342 -160986954 - RCHARR1 DNA MER1_type -106 868 455 2 628 838 241 156 56 chrX 5663394 5663927 -160986369 - RCHARR1 DNA MER1_type -386 588 3 2 628 392 244 11 0 chrX 5664638 5664728 -160985568 + L1ME3A LINE L1 5542 5632 -541 2 628 303 359 116 5 chrX 5664732 5664939 -160985357 - MLT1E LTR MaLR 0 624 395 2 628 295 316 40 62 chrX 5665018 5665244 -160985052 - MLT1E LTR MaLR -401 223 3 2 628 272 264 43 11 chrX 5665594 5665686 -160984610 - MLT1E-int LTR MaLR -1355 134 40 2 628 387 318 145 5 chrX 5665704 5665925 -160984371 - MLT1E LTR MaLR -401 252 1 2 628 333 310 221 11 chrX 5665942 5666308 -160983988 + L1ME3A LINE L1 5681 6122 -51 2 628 387 0 0 0 chrX 5666949 5666992 -160983304 + (TC)n Simple_repeat Simple_repeat 2 44 0 2 628 270 0 0 0 chrX 5666992 5667021 -160983275 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 628 198 350 64 40 chrX 5667258 5667383 -160982913 + MIRb SINE MIR 8 135 -133 2 628 192 200 0 0 chrX 5668340 5668385 -160981911 + (CATATA)n Simple_repeat Simple_repeat 6 50 0 2 628 183 42 0 0 chrX 5668963 5668987 -160981309 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 628 612 281 57 0 chrX 5670844 5671054 -160979242 - L1MA4 LINE L1 -402 5898 5677 2 628 435 259 31 21 chrX 5671122 5671335 -160978961 - L1MA4 LINE L1 -810 5333 5091 2 628 252 100 0 0 chrX 5671510 5671550 -160978746 + (CATA)n Simple_repeat Simple_repeat 3 42 0 2 628 2975 268 61 59 chrX 5671550 5672154 -160978142 - Lx9 LINE L1 -187 7457 6881 2 628 189 0 0 0 chrX 5672154 5672175 -160978121 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 628 2975 268 61 59 chrX 5672175 5672609 -160977687 - Lx9 LINE L1 -764 6880 6418 2 628 216 0 0 0 chrX 5672651 5672675 -160977621 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 2 628 573 291 32 2 chrX 5672690 5672958 -160977338 - L1MA4 LINE L1 -774 5106 4856 2 628 274 306 9 0 chrX 5672940 5673051 -160977245 - L1MA4 LINE L1 -1396 4484 4373 2 628 344 366 60 15 chrX 5673745 5673878 -160976418 - ID_B1 SINE B4 -4 220 82 2 628 191 324 13 39 chrX 5674448 5674525 -160975771 - L2 LINE L2 -3014 405 331 2 628 366 250 30 15 chrX 5675010 5675044 -160975252 - L1MA4 LINE L1 -1509 4371 4334 2 628 349 194 11 0 chrX 5675044 5675137 -160975159 - Lx4A LINE L1 -4 7054 6961 2 628 373 298 5 4 chrX 5675137 5675283 -160975013 - L1MA4 LINE L1 -1777 4363 4218 2 628 633 192 146 0 chrX 5675396 5675526 -160974770 + B1_Mur4 SINE Alu 1 149 -1 2 628 284 45 0 43 chrX 5675535 5675582 -160974714 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 2 628 334 337 32 63 chrX 5675657 5675847 -160974449 - MIR SINE MIR -43 219 36 2 628 1456 41 0 25 chrX 5675995 5676194 -160974102 + L1Md_F3 LINE L1 6391 6584 0 2 628 1387 239 53 7 chrX 5676201 5676504 -160973792 + Lx6 LINE L1 6979 7295 -165 2 628 1128 242 102 67 chrX 5676985 5677372 -160972924 - MTE2b LTR MaLR -2 357 1 2 628 2376 257 91 72 chrX 5677371 5677536 -160972760 - MTE2b-int LTR MaLR 0 1580 1428 2 628 658 298 6 0 chrX 5677536 5677697 -160972599 + RSINE1 SINE B4 2 163 -2 2 628 2376 257 91 72 chrX 5677697 5678269 -160972027 - MTE2b-int LTR MaLR -153 1427 829 2 628 252 264 69 54 chrX 5678492 5678696 -160971600 - L1MC LINE L1 -1102 5044 4838 2 628 413 277 85 58 chrX 5678741 5678929 -160971367 - L1MC LINE L1 -2833 3313 3121 2 628 4223 81 9 0 chrX 5679024 5679792 -160970504 - L1_Mus2 LINE L1 -506 6060 5286 2 628 7552 28 5 2 chrX 5679784 5680678 -160969618 - L1Md_F3 LINE L1 -2 6582 5687 2 628 3044 76 32 77 chrX 5680687 5681157 -160969139 + L1_Mus2 LINE L1 6118 6566 0 2 628 696 228 0 0 chrX 5682155 5682291 -160968005 - B1_Mur4 SINE Alu -13 137 2 2 628 525 298 194 30 chrX 5682307 5682636 -160967660 + MLT1D LTR MaLR 82 464 -41 2 628 202 194 0 0 chrX 5682735 5682771 -160967525 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 628 414 0 0 0 chrX 5682907 5682953 -160967343 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 628 707 262 62 62 chrX 5683566 5683839 -160966457 + B4A SINE B4 1 273 -19 2 628 465 19 0 0 chrX 5683874 5683928 -160966368 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 628 1022 33 0 0 chrX 5684008 5684128 -160966168 + 5S rRNA rRNA 1 120 -1 2 628 198 0 0 0 chrX 5684326 5684348 -160965948 + (TC)n Simple_repeat Simple_repeat 1 22 0 2 628 477 0 0 0 chrX 5684348 5684400 -160965896 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 628 375 232 158 0 chrX 5684401 5684496 -160965800 - PB1D10 SINE Alu -7 110 1 2 628 503 97 0 14 chrX 5684544 5684617 -160965679 - Lx3C LINE L1 -415 6561 6490 2 628 923 277 93 113 chrX 5684664 5685000 -160965296 - L1MA5 LINE L1 -1 6299 5952 2 628 813 274 94 36 chrX 5685000 5685276 -160965020 - B4 SINE B4 0 292 1 2 628 923 277 93 113 chrX 5685276 5685477 -160964819 - L1MA5 LINE L1 -349 5951 5742 2 628 207 100 0 0 chrX 5685477 5685507 -160964789 + (TCCA)n Simple_repeat Simple_repeat 4 33 0 2 628 923 277 93 113 chrX 5685507 5685743 -160964553 - L1MA5 LINE L1 -559 5741 5541 2 628 21 36 0 0 chrX 5685909 5685937 -160964359 + AT_rich Low_complexity Low_complexity 1 28 0 2 628 253 94 37 19 chrX 5686045 5686099 -160964197 + (CAAAA)n Simple_repeat Simple_repeat 3 57 0 2 628 842 214 73 6 chrX 5686312 5686544 -160963752 - Lx6 LINE L1 -253 7207 7042 3 628 534 294 31 41 chrX 5687008 5687203 -160963093 - MLT1B LTR MaLR -13 377 185 3 628 5386 164 68 14 chrX 5687239 5688277 -160962019 - Lx3C LINE L1 0 6976 5882 3 628 246 150 0 0 chrX 5688282 5688322 -160961974 - MLT1B LTR MaLR -213 177 138 3 628 217 231 19 0 chrX 5688812 5688864 -160961432 + GA-rich Low_complexity Low_complexity 4 56 0 3 628 424 311 77 57 chrX 5689856 5690050 -160960246 + LTR75 LTR ERVL 195 392 -170 3 628 837 265 80 0 chrX 5690065 5690265 -160960031 - B3 SINE B2 0 216 1 3 628 1227 48 0 0 chrX 5690292 5690439 -160959857 - B1_Mus2 SINE Alu 0 147 1 3 628 1342 71 16 21 chrX 5690439 5690625 -160959671 - B2_Mm1t SINE B2 -4 189 4 3 628 653 228 86 14 chrX 5691130 5691352 -160958944 - L1MB2 LINE L1 -40 6131 5894 3 628 247 143 60 20 chrX 5691352 5691402 -160958894 - RLTR17 LTR ERVK -554 138 87 3 628 535 251 53 27 chrX 5691402 5691590 -160958706 - L1MB2 LINE L1 -327 5844 5652 3 628 396 252 0 0 chrX 5691629 5691752 -160958544 + CT-rich Low_complexity Low_complexity 2 124 0 3 628 919 104 12 0 chrX 5691755 5691928 -160958368 + (TC)n Simple_repeat Simple_repeat 2 176 0 3 628 188 0 0 69 chrX 5691987 5692016 -160958280 + (CATATA)n Simple_repeat Simple_repeat 1 27 0 3 628 903 165 49 9 chrX 5692092 5692292 -160958004 + B2_Mm2 SINE B2 1 216 0 3 628 426 273 23 0 chrX 5692331 5692459 -160957837 - L1MA9 LINE L1 -165 6147 6017 3 628 301 274 0 0 chrX 5692580 5692653 -160957643 - L1MA9 LINE L1 -585 5583 5511 3 628 216 0 0 0 chrX 5692665 5692689 -160957607 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 628 558 298 63 7 chrX 5692693 5692835 -160957461 - B4 SINE B4 -7 285 136 3 628 1305 155 88 0 chrX 5692887 5693126 -160957170 - Lx3C LINE L1 -5 6971 6712 3 628 232 290 32 0 chrX 5693270 5693332 -160956964 - ID4_ SINE ID -13 70 7 3 628 255 323 67 30 chrX 5693958 5694092 -160956204 - L1M3e LINE L1 -6851 179 41 3 628 235 226 0 0 chrX 5694130 5694183 -160956113 - L1MD LINE L1 -1315 4831 4779 3 628 384 273 68 54 chrX 5694317 5694587 -160955709 - L1MB8 LINE L1 -104 6074 5800 3 628 738 34 0 0 chrX 5694673 5694762 -160955534 + (TC)n Simple_repeat Simple_repeat 2 90 0 3 628 1909 235 92 8 chrX 5694852 5694908 -160955388 - Lx7 LINE L1 -269 7427 7362 3 628 387 0 0 0 chrX 5694908 5694951 -160955345 + (TAAAA)n Simple_repeat Simple_repeat 2 44 0 3 628 1909 235 92 8 chrX 5694951 5695371 -160954925 - Lx7 LINE L1 -335 7361 6913 3 628 2341 204 62 0 chrX 5695363 5695799 -160954497 + Lx7 LINE L1 6456 6918 -778 3 628 450 307 0 0 chrX 5695797 5695947 -160954349 - L1M4 LINE L1 -357 5821 5672 3 628 211 366 19 29 chrX 5695953 5696057 -160954239 - AmnSINE1 SINE SINE -465 110 8 3 628 319 244 37 0 chrX 5696057 5696139 -160954157 - ERVL-B4-int LTR ERVL -4131 1536 1452 3 628 2026 80 24 66 chrX 5696139 5696472 -160953824 - ORR1A2 LTR MaLR -8 319 1 3 628 396 317 0 24 chrX 5696522 5696645 -160953651 - ERVL-B4-int LTR ERVL -4237 1477 1358 3 628 386 354 71 43 chrX 5696666 5696991 -160953305 + ORR1E LTR MaLR 24 357 -2 3 628 724 244 107 5 chrX 5697002 5697208 -160953088 - ERVL-B4-int LTR ERVL -4356 1358 1132 3 628 365 296 41 0 chrX 5697351 5697449 -160952847 - PB1D10 SINE Alu -10 107 6 3 628 3752 103 20 14 chrX 5697468 5698022 -160952274 + RLTR31B_Mm LTR ERVK 1 557 0 3 628 3227 264 56 83 chrX 5698066 5699124 -160951172 + ORR1D2-int LTR MaLR 342 1370 0 3 628 1118 239 60 101 chrX 5699124 5699429 -160950867 + ORR1D2 LTR MaLR 1 313 -57 3 628 428 0 19 0 chrX 5699429 5699481 -160950815 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 628 1118 239 60 101 chrX 5699481 5699561 -160950735 + ORR1D2 LTR MaLR 314 370 0 3 628 768 251 60 143 chrX 5699653 5700002 -160950294 - RLTR18 LTR ERVK -2 614 295 3 628 21 0 0 0 chrX 5700093 5700114 -160950182 + AT_rich Low_complexity Low_complexity 1 21 0 3 628 550 247 47 62 chrX 5700177 5700377 -160949919 - RLTR18 LTR ERVK -312 200 1 3 628 431 275 107 14 chrX 5700461 5700601 -160949695 - MLT2B4 LTR ERVL -2 565 413 3 628 491 310 129 37 chrX 5700586 5700878 -160949418 - MLT2B4 LTR ERVL -264 290 4 3 628 1219 258 48 12 chrX 5701030 5701364 -160948932 + Lx6 LINE L1 7079 7424 -36 3 628 369 268 84 39 chrX 5701427 5701472 -160948824 - L1M4b LINE L1 -5094 2240 2196 3 628 186 43 0 0 chrX 5701472 5701495 -160948801 + (TTGG)n Simple_repeat Simple_repeat 1 23 0 3 628 369 268 84 39 chrX 5701495 5701628 -160948668 - L1M4b LINE L1 -5139 2195 2054 3 628 360 0 0 0 chrX 5701631 5701671 -160948625 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 628 3003 93 2 23 chrX 5702119 5702550 -160947746 + L1_Mus2 LINE L1 6145 6566 0 3 628 257 302 39 16 chrX 5702644 5702772 -160947524 - L1M4b LINE L1 -7116 218 88 3 628 425 139 73 33 chrX 5702754 5702881 -160947415 - Lx2A1 LINE L1 -9 6988 6867 3 628 450 0 0 0 chrX 5703006 5703056 -160947240 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 628 515 284 156 42 chrX 5703529 5703686 -160946610 - L1MCa LINE L1 -4625 1883 1714 3 628 756 197 14 0 chrX 5703686 5703828 -160946468 + B1_Mur4 SINE Alu 3 146 -4 3 628 515 284 156 42 chrX 5703828 5704354 -160945942 - L1MCa LINE L1 -4795 1713 1122 3 628 3424 310 47 11 chrX 5704422 5705590 -160944706 - Lx8 LINE L1 -37 7436 6227 3 628 341 343 62 6 chrX 5705619 5705795 -160944501 - L1MCa LINE L1 -5419 1089 904 3 628 27 29 0 0 chrX 5705796 5705830 -160944466 + AT_rich Low_complexity Low_complexity 1 34 0 3 628 676 292 35 78 chrX 5706175 5706546 -160943750 - L1MA5A LINE L1 -435 5862 5508 3 628 637 219 36 7 chrX 5706566 5706704 -160943592 - B1_Mur1 SINE Alu -6 143 2 3 628 739 286 15 0 chrX 5706874 5707070 -160943226 + B3 SINE B2 18 216 0 3 628 408 107 80 0 chrX 5707073 5707148 -160943148 + L1_Mus3 LINE L1 6556 6636 -2 3 628 233 322 110 20 chrX 5707258 5707404 -160942892 - MIRb SINE MIR -6 262 104 3 628 182 340 21 0 chrX 5707470 5707517 -160942779 - MIRm SINE MIR -18 258 211 3 628 247 286 0 0 chrX 5707483 5707532 -160942764 - L2a LINE L2 -34 3392 3344 3 628 210 337 0 95 chrX 5707732 5707827 -160942469 - RSINE1 SINE B4 0 165 80 3 628 906 252 32 28 chrX 5707927 5708180 -160942116 + Lx7 LINE L1 6990 7243 -453 3 628 42 57 0 0 chrX 5708341 5708411 -160941885 + AT_rich Low_complexity Low_complexity 1 70 0 3 628 1077 63 0 0 chrX 5708417 5708559 -160941737 + (TG)n Simple_repeat Simple_repeat 1 142 0 3 628 558 308 14 7 chrX 5708562 5708709 -160941587 - B3A SINE B2 -37 161 14 3 628 1009 250 41 11 chrX 5708765 5709036 -160941260 - Lx6 LINE L1 -1 7459 7181 3 628 1538 284 71 24 chrX 5709030 5709795 -160940501 - L1MA5A LINE L1 -863 5280 4480 3 628 768 242 110 42 chrX 5709798 5710181 -160940115 - L1_Mur3 LINE L1 -1624 4256 3848 3 628 877 304 114 40 chrX 5710189 5711031 -160939265 - L1MA5A LINE L1 -3034 3109 2206 3 628 28 29 0 0 chrX 5711258 5711293 -160939003 + AT_rich Low_complexity Low_complexity 1 35 0 3 628 21340 87 19 6 chrX 5711297 5713643 -160936653 - L1Md_F2 LINE L1 -3 6579 4205 3 628 429 95 0 0 chrX 5713643 5713706 -160936590 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 628 21340 89 10 2 chrX 5713706 5715023 -160935273 - L1Md_F2 LINE L1 -1679 4204 2873 3 628 5428 96 25 19 chrX 5715023 5716502 -160933794 - L1Md_F2 LINE L1 -4024 1859 395 3 628 442 329 72 56 chrX 5716558 5716738 -160933558 - RMER13B LTR ERVK -4 856 674 3 628 1223 190 0 84 chrX 5716753 5716888 -160933408 - RMER13B LTR ERVK -385 523 398 3 628 279 0 0 0 chrX 5716888 5716919 -160933377 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 628 1223 252 39 86 chrX 5716919 5717462 -160932834 - RMER13B LTR ERVK -396 510 6 3 628 615 232 11 56 chrX 5717535 5717713 -160932583 - RMER15 LTR ERVL -55 520 351 3 628 1182 216 39 17 chrX 5718016 5718410 -160931886 + MT2A LTR ERVL 1 570 -31 3 628 25 0 0 0 chrX 5718617 5718642 -160931654 + AT_rich Low_complexity Low_complexity 1 25 0 3 628 308 287 100 56 chrX 5719019 5719137 -160931159 - L1MA6 LINE L1 -37 6263 6128 3 628 180 0 0 0 chrX 5719137 5719157 -160931139 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 628 308 287 100 56 chrX 5719157 5719289 -160931007 - L1MA6 LINE L1 -173 6127 6002 3 628 701 236 68 45 chrX 5719301 5719523 -160930773 - RMER15 LTR ERVL -13 562 336 3 628 357 268 40 85 chrX 5719802 5720031 -160930265 + L1MA4A LINE L1 5720 5951 -352 3 628 445 322 41 69 chrX 5720040 5720360 -160929936 - L1MCb LINE L1 -4967 1078 768 3 628 509 30 0 15 chrX 5720442 5720510 -160929786 + (TG)n Simple_repeat Simple_repeat 1 67 0 3 628 382 346 59 0 chrX 5720513 5720666 -160929630 - RSINE1 SINE B4 -1 164 3 3 628 435 19 0 0 chrX 5720679 5720731 -160929565 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 3 628 1097 91 12 6 chrX 5720738 5720904 -160929392 + L1_Mus1 LINE L1 6401 6567 0 3 628 694 197 8 8 chrX 5720906 5721034 -160929262 - B1_Mur4 SINE Alu -13 137 10 3 628 709 277 119 40 chrX 5721100 5721630 -160928666 - L1MD LINE L1 -3354 2792 2221 3 628 699 139 9 0 chrX 5721907 5722022 -160928274 + ORR1B1 LTR MaLR 1 116 -278 3 628 23425 97 10 12 chrX 5722546 5726683 -160923613 + L1_Mus1 LINE L1 2442 6566 -1 3 628 492 128 26 35 chrX 5726690 5726803 -160923493 + L1Md_F2 LINE L1 6471 6582 0 3 628 739 201 40 29 chrX 5727294 5727468 -160922828 + B2_Mm2 SINE B2 1 176 -19 3 628 1135 188 75 17 chrX 5727983 5728328 -160921968 + RMER10A LTR ERVL 8 408 -34 3 628 774 0 0 0 chrX 5728328 5728414 -160921882 + (TTTCC)n Simple_repeat Simple_repeat 3 88 0 3 628 7779 64 26 6 chrX 5728694 5729714 -160920582 + L1_Mus3 LINE L1 5596 6636 -2 3 628 8187 36 7 0 chrX 5730480 5731451 -160918845 + L1Md_F2 LINE L1 5603 6580 -2 3 628 306 280 21 21 chrX 5731769 5731864 -160918432 - MER57C2 LTR ERV1 -245 189 95 3 628 1767 140 32 93 chrX 5731872 5732249 -160918047 - ORR1B1 LTR MaLR 0 394 41 3 628 203 379 10 10 chrX 5732558 5732662 -160917634 + MIRb SINE MIR 113 216 -52 3 628 1377 157 0 0 chrX 5732755 5732978 -160917318 - Lx2 LINE L1 0 6997 6775 3 628 7180 132 50 14 chrX 5732976 5734259 -160916037 - Lx2 LINE L1 -361 6636 5218 3 628 7011 73 4 8 chrX 5734245 5735671 -160914625 - L1VL4 LINE L1 -1738 1821 401 3 628 455 315 58 68 chrX 5737050 5737343 -160912953 - B4 SINE B4 0 292 3 3 628 672 344 113 42 chrX 5737372 5737778 -160912518 + LTR75 LTR ERVL 21 455 -107 3 628 513 123 5 5 chrX 5737780 5737878 -160912418 + MT2B LTR ERVL 4 101 -432 3 628 600 226 32 0 chrX 5737914 5738038 -160912258 + MT2B LTR ERVL 87 214 -319 3 628 3411 152 134 25 chrX 5738048 5738844 -160911452 - RLTR13D6 LTR ERVK -19 883 1 3 628 721 215 61 0 chrX 5738847 5739010 -160911286 + MT2B LTR ERVL 368 540 -61 3 628 342 0 0 0 chrX 5739027 5739065 -160911231 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 628 487 145 0 0 chrX 5739070 5739146 -160911150 - ORR1D1 LTR MaLR -298 76 1 3 628 256 254 0 0 chrX 5739204 5739263 -160911033 - LTR75 LTR ERVL -53 509 451 4 628 364 149 15 0 chrX 5739340 5739407 -160910889 + ORR1D1 LTR MaLR 173 240 -134 4 628 487 261 61 0 chrX 5739443 5739558 -160910738 + B1F SINE Alu 2 123 -26 4 628 288 190 0 71 chrX 5739559 5739644 -160910652 + B1F SINE Alu 69 147 -2 4 628 509 230 48 41 chrX 5739683 5739828 -160910468 + B1F SINE Alu 2 147 -2 4 628 2480 177 136 2 chrX 5740169 5740685 -160909611 - RMER4B LTR ERVK 0 585 1 4 628 399 275 0 18 chrX 5740897 5741008 -160909288 - PB1D10 SINE Alu -8 109 1 4 628 907 279 109 42 chrX 5741097 5741527 -160908769 + HERVL74-int LTR ERVL 1459 1917 -3768 4 628 639 278 169 52 chrX 5741639 5741946 -160908350 - MER2 DNA MER2_type 0 345 3 4 628 379 274 145 44 chrX 5742061 5742315 -160907981 + HERVL74-int LTR ERVL 2078 2345 -1211 4 628 327 25 0 0 chrX 5742892 5742932 -160907364 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 4 628 233 338 110 22 chrX 5743445 5743581 -160906715 + LTR52 LTR ERVL 271 418 -3 4 628 475 313 232 8 chrX 5743598 5743968 -160906328 + LTR75 LTR ERVL 77 529 -33 4 628 350 129 16 0 chrX 5744430 5744492 -160905804 + (TA)n Simple_repeat Simple_repeat 1 63 0 4 628 45 0 0 0 chrX 5744495 5744540 -160905756 + AT_rich Low_complexity Low_complexity 1 45 0 4 628 186 176 0 0 chrX 5745569 5745620 -160904676 + A-rich Low_complexity Low_complexity 1 51 0 4 628 540 281 73 44 chrX 5745834 5746417 -160903879 - L1MC5 LINE L1 -36 7925 7294 4 628 257 292 55 55 chrX 5746565 5746692 -160903604 - L2c LINE L2 -8 3379 3253 4 628 258 32 0 0 chrX 5748947 5748978 -160901318 + (A)n Simple_repeat Simple_repeat 1 31 0 4 628 210 156 0 0 chrX 5749094 5749139 -160901157 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 628 228 100 0 0 chrX 5750135 5750175 -160900121 + (CGGGGG)n Simple_repeat Simple_repeat 5 44 0 4 628 26 30 0 0 chrX 5750194 5750227 -160900069 + GC_rich Low_complexity Low_complexity 1 33 0 4 628 246 62 0 0 chrX 5750378 5750410 -160899886 + (CCG)n Simple_repeat Simple_repeat 3 34 0 4 628 227 171 0 0 chrX 5750432 5750473 -160899823 + (CG)n Simple_repeat Simple_repeat 1 41 0 4 628 528 120 0 0 chrX 5751143 5751243 -160899053 + (TG)n Simple_repeat Simple_repeat 2 101 0 4 628 339 264 121 34 chrX 5751423 5751572 -160898724 - B4A SINE B4 -129 163 2 4 628 6957 175 27 40 chrX 5751973 5753623 -160896673 - Lx2B LINE L1 -23 6977 5302 4 628 4010 92 3 9 chrX 5753623 5754193 -160896103 + L1_Mus4 LINE L1 6054 6620 -16 4 628 4897 158 38 65 chrX 5754193 5754646 -160895650 - Lx2B LINE L1 -576 5301 4905 4 628 334 289 11 0 chrX 5754648 5754738 -160895558 + 4.5SRNA scRNA scRNA 1 91 -3 4 628 432 0 0 0 chrX 5754742 5754790 -160895506 + (TC)n Simple_repeat Simple_repeat 1 48 0 4 628 761 192 80 0 chrX 5754805 5754956 -160895340 - Lx3B LINE L1 -1 6972 6810 4 628 5901 181 3 52 chrX 5754961 5755374 -160894922 + L1_Mus2 LINE L1 4725 5132 -754 4 628 1709 26 0 0 chrX 5755374 5755566 -160894730 + B2_Mm1a SINE B2 2 193 0 4 628 7435 115 2 21 chrX 5755566 5757059 -160893237 + L1_Mus2 LINE L1 5133 6566 0 4 628 4713 137 30 4 chrX 5757063 5757809 -160892487 - Lx3B LINE L1 -155 6818 6054 4 628 549 0 0 0 chrX 5758164 5758225 -160892071 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 628 296 339 91 84 chrX 5760582 5760634 -160889662 - B4 SINE B4 -16 276 227 4 628 897 62 0 0 chrX 5760634 5760763 -160889533 + (TTTAG)n Simple_repeat Simple_repeat 2 130 0 4 628 296 339 91 84 chrX 5760763 5760984 -160889312 - B4 SINE B4 -66 226 1 4 628 2179 316 44 70 chrX 5761769 5763236 -160887060 - Lx9 LINE L1 -30 7614 6185 4 628 1020 247 0 5 chrX 5763238 5763458 -160886838 - MTD LTR MaLR -98 321 103 4 628 4755 179 56 7 chrX 5763460 5764364 -160885932 + Lx4A LINE L1 5978 6926 -132 4 628 234 296 14 0 chrX 5764364 5764435 -160885861 - MTD LTR MaLR -325 94 23 4 628 1187 247 53 9 chrX 5764440 5764759 -160885537 + Lx5 LINE L1 6718 7050 0 4 628 1700 277 107 22 chrX 5764797 5765564 -160884732 - L1_Rod LINE L1 -129 5718 4887 4 628 418 245 65 2 chrX 5765559 5765695 -160884601 + L1_Rod LINE L1 3772 3917 -1930 4 78 1574 282 84 87 chrX 5766076 5767290 -160883006 - L1_Rod LINE L1 -2099 3748 2538 4 629 1615 169 101 3 chrX 5767890 5768216 -160882080 + RLTR14 LTR ERV1 22 379 -3 4 629 2322 212 190 45 chrX 5768216 5768583 -160881713 + RLTR14-int LTR ERV1 1 428 -4889 4 629 288 0 0 0 chrX 5768583 5768615 -160881681 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 629 2322 212 190 45 chrX 5768615 5768999 -160881297 + RLTR14-int LTR ERV1 429 860 -4457 4 629 7470 83 2 4 chrX 5769037 5770293 -160880003 - L1_Mus2 LINE L1 -1 6565 5313 4 629 16228 172 61 27 chrX 5770403 5770501 -160879795 + RLTR14-int LTR ERV1 949 1045 -4272 4 629 2221 128 27 0 chrX 5770501 5770838 -160879458 + ORR1A1 LTR MaLR 1 346 0 4 629 16228 170 80 26 chrX 5770838 5774179 -160876117 + RLTR14-int LTR ERV1 1046 4571 -746 4 629 242 213 118 78 chrX 5774311 5774413 -160875883 - MLT1E2 LTR MaLR -156 471 366 4 629 509 256 0 8 chrX 5775049 5775179 -160875117 + MT2A LTR ERVL 1 129 -404 4 629 595 188 0 0 chrX 5775176 5775288 -160875008 + MT2A LTR ERVL 92 203 -330 4 629 22 35 0 0 chrX 5775294 5775323 -160874973 + AT_rich Low_complexity Low_complexity 1 29 0 4 629 1100 214 9 34 chrX 5775628 5775862 -160874434 + Lx5 LINE L1 6571 6774 -276 4 629 25 51 0 0 chrX 5776229 5776268 -160874028 + AT_rich Low_complexity Low_complexity 1 39 0 4 629 3189 103 17 6 chrX 5776271 5776738 -160873558 - Lx3A LINE L1 -3 6978 6507 4 629 189 0 0 0 chrX 5776747 5776768 -160873528 + (TA)n Simple_repeat Simple_repeat 1 21 0 4 629 2035 125 26 0 chrX 5776772 5777077 -160873219 - Lx3_Mus LINE L1 -16 6993 6681 4 629 5947 85 24 40 chrX 5777077 5777921 -160872375 - Lx3_Mus LINE L1 -481 6528 5682 4 629 6647 100 75 8 chrX 5777929 5779856 -160870440 - L1_Mur1 LINE L1 -3813 2073 3 4 629 276 100 0 0 chrX 5781063 5781103 -160869193 + (CATA)n Simple_repeat Simple_repeat 1 40 0 4 629 604 303 0 50 chrX 5781103 5781263 -160869033 - B3A SINE B2 -16 182 31 4 629 251 280 196 20 chrX 5781587 5781933 -160868363 - L1MEf LINE L1 -4919 1281 875 4 629 516 308 54 0 chrX 5781934 5782064 -160868232 + RSINE1 SINE B4 3 139 -26 4 629 372 43 0 0 chrX 5782071 5782117 -160868179 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 629 30 45 0 0 chrX 5782167 5782211 -160868085 + AT_rich Low_complexity Low_complexity 1 44 0 4 629 505 175 0 0 chrX 5782211 5782291 -160868005 - B3 SINE B2 0 216 137 4 629 2153 276 48 42 chrX 5782291 5783335 -160866961 + Lx5 LINE L1 6041 7055 -3 4 629 312 91 0 0 chrX 5783579 5783623 -160866673 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 4 629 2300 162 149 16 chrX 5783632 5784199 -160866097 - RLTR26 LTR ERVK 0 642 1 4 629 396 286 0 39 chrX 5784408 5784510 -160865786 - B4A SINE B4 -143 149 52 4 629 408 40 0 0 chrX 5784534 5784584 -160865712 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 629 394 271 149 25 chrX 5784584 5784705 -160865591 - RSINE1 SINE B4 -22 143 8 4 629 326 349 119 5 chrX 5784719 5784912 -160865384 + L1M5 LINE L1 4493 4707 -1439 4 629 223 191 106 0 chrX 5785159 5785206 -160865090 + PB1D10 SINE Alu 43 94 -23 4 629 840 268 47 16 chrX 5785538 5785731 -160864565 + B3 SINE B2 12 210 -6 4 629 498 210 142 31 chrX 5785935 5786097 -160864199 + B3A SINE B2 3 182 -16 4 629 203 204 19 0 chrX 5786367 5786421 -160863875 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 4 629 234 0 0 0 chrX 5786720 5786746 -160863550 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 4 629 537 58 0 0 chrX 5786750 5786819 -160863477 + (GGGGA)n Simple_repeat Simple_repeat 5 73 0 4 629 843 10 0 0 chrX 5786833 5786929 -160863367 + (GGAAA)n Simple_repeat Simple_repeat 5 100 0 4 629 342 172 0 41 chrX 5786945 5787042 -160863254 + T-rich Low_complexity Low_complexity 1 93 0 4 629 312 345 109 30 chrX 5787134 5787507 -160862789 + MLT1H1 LTR MaLR 1 402 -153 4 629 313 330 78 0 chrX 5787688 5787803 -160862493 + MLT1A LTR MaLR 136 259 -115 4 629 262 308 44 0 chrX 5787852 5787943 -160862353 + MLT1A LTR MaLR 252 346 -19 4 629 974 256 37 74 chrX 5788565 5788890 -160861406 - Lx8 LINE L1 -391 7082 6770 4 629 1161 48 14 0 chrX 5789416 5789561 -160860735 + B1_Mm SINE Alu 1 147 0 4 629 411 277 75 6 chrX 5789875 5790035 -160860261 - RLTR40 LTR ERVK -155 662 492 4 629 1456 231 92 48 chrX 5790268 5790727 -160859569 - RLTR40 LTR ERVK -338 479 1 4 629 707 279 20 85 chrX 5792102 5792302 -160857994 - B3A SINE B2 -6 192 6 4 629 33 100 0 0 chrX 5792310 5792420 -160857876 + AT_rich Low_complexity Low_complexity 1 110 0 4 629 1056 203 4 21 chrX 5792494 5792731 -160857565 + Lx9 LINE L1 5543 5775 -72 4 629 2967 175 52 29 chrX 5792759 5793319 -160856977 + RMER15 LTR ERVL 1 573 -2 4 629 495 266 0 8 chrX 5793320 5793449 -160856847 + Lx9 LINE L1 5848 5975 -1669 4 629 416 310 30 36 chrX 5793488 5793744 -160856552 - Lx8 LINE L1 -1348 6348 6097 4 629 313 252 69 29 chrX 5793991 5794088 -160856208 + RMER15 LTR ERVL 20 120 -455 4 629 1627 147 88 144 chrX 5794088 5794326 -160855970 - MTC LTR MaLR 0 421 203 4 629 4364 110 103 13 chrX 5794326 5795035 -160855261 - Lx4A LINE L1 -3 7055 6283 4 629 1627 147 88 144 chrX 5795035 5795193 -160855103 - MTC LTR MaLR -219 202 47 4 629 1218 45 0 0 chrX 5795265 5795419 -160854877 + L1Md_F2 LINE L1 5433 5586 -297 4 629 8306 38 3 2 chrX 5795419 5796414 -160853882 + L1Md_F2 LINE L1 5587 6582 0 4 629 836 239 231 4 chrX 5796419 5796679 -160853617 + RMER15 LTR ERVL 257 575 0 4 629 291 321 142 14 chrX 5798598 5798810 -160851486 - L1M3e LINE L1 -6646 384 146 4 629 3407 84 0 4 chrX 5799350 5799805 -160850491 - L1Md_F2 LINE L1 -13 6569 6117 4 629 1676 95 0 0 chrX 5799805 5800046 -160850250 - L1_Mm LINE L1 -756 5127 4887 4 629 5315 58 12 0 chrX 5800044 5800762 -160849534 + L1_Mm LINE L1 4093 4819 -1064 4 629 833 168 62 34 chrX 5800770 5800949 -160849347 - B2_Mm2 SINE B2 -10 185 2 4 629 338 286 54 62 chrX 5801041 5801153 -160849143 + LTR16B2 LTR ERVL 1 111 -351 4 629 378 308 156 0 chrX 5801445 5801747 -160848549 - Lx9 LINE L1 -22 7622 7274 4 629 2427 179 29 92 chrX 5801747 5802270 -160848026 + RLTR18B LTR ERVK 16 505 -7 4 629 360 310 107 14 chrX 5802274 5802490 -160847806 - Lx8 LINE L1 -356 7117 6882 4 629 1018 292 40 14 chrX 5802508 5802928 -160847368 - L1_Rod LINE L1 -1513 4334 3904 4 629 368 70 18 0 chrX 5802930 5802987 -160847309 - L1Md_F3 LINE L1 -639 5945 5888 4 629 5072 55 25 0 chrX 5802987 5803640 -160846656 + L1Md_F3 LINE L1 5915 6583 -1 4 629 1132 75 14 0 chrX 5803669 5803815 -160846481 + B1_Mus1 SINE Alu 1 148 0 4 629 1219 243 107 83 chrX 5803828 5804502 -160845794 - L1_Rod LINE L1 -1935 3912 3223 4 629 4295 234 43 33 chrX 5804993 5806467 -160843829 - L1_Rod LINE L1 -2632 3215 1728 4 629 1471 244 48 6 chrX 5806545 5806879 -160843417 + MTE2b LTR MaLR 32 379 0 4 629 603 291 67 9 chrX 5807100 5807325 -160842971 + L1M2 LINE L1 5548 5785 -506 5 629 414 189 37 15 chrX 5807348 5807482 -160842814 - Lx5 LINE L1 -3 7047 6911 5 629 800 104 8 0 chrX 5807477 5807602 -160842694 + Lx5 LINE L1 5836 5961 -1089 5 629 1569 65 5 0 chrX 5807599 5807813 -160842483 - L1_Mus2 LINE L1 -522 6044 5830 5 629 4112 72 4 11 chrX 5807813 5808358 -160841938 + L1_Mus2 LINE L1 6026 6566 0 5 629 1343 56 3 8 chrX 5808383 5808747 -160841549 + (GAA)n Simple_repeat Simple_repeat 1 361 0 5 629 1633 221 58 0 chrX 5808754 5809134 -160841162 + Lx5 LINE L1 5948 6349 -701 5 629 3305 123 49 14 chrX 5809469 5810045 -160840251 + L1_Mur2 LINE L1 4349 4944 -933 5 629 234 167 0 0 chrX 5810045 5810081 -160840215 + RMER2 LTR ERV1 1 36 -531 5 629 1282 99 15 0 chrX 5810131 5810332 -160839964 + MusHAL1 LINE L1 1066 1269 -1443 5 629 730 106 22 66 chrX 5810444 5810626 -160839670 - L1VL4 LINE L1 -1798 1761 1588 5 629 5833 59 19 3 chrX 5810596 5811584 -160838712 - L1VL4 LINE L1 -2409 1150 144 5 629 2046 133 0 87 chrX 5811848 5812227 -160838069 + ORR1B1 LTR MaLR 41 386 -8 5 629 849 250 17 0 chrX 5812346 5812526 -160837770 + ID_B1 SINE B4 4 186 -38 5 629 34 24 0 0 chrX 5812526 5812567 -160837729 + AT_rich Low_complexity Low_complexity 1 41 0 5 629 951 276 0 5 chrX 5812595 5812795 -160837501 + B3 SINE B2 1 199 -17 5 629 1104 180 29 5 chrX 5812821 5813028 -160837268 - ORR1C1 LTR MaLR -166 212 1 5 629 509 236 7 30 chrX 5813432 5813587 -160836709 - MLT1A1 LTR MaLR -9 399 208 5 629 2118 209 86 6 chrX 5814010 5814554 -160835742 + Lx3C LINE L1 6385 6972 -4 5 629 733 275 0 18 chrX 5815247 5815410 -160834886 + B3A SINE B2 1 160 -38 5 629 387 0 0 0 chrX 5815413 5815456 -160834840 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 629 743 217 162 13 chrX 5815491 5815722 -160834574 - Lx6 LINE L1 -227 7233 7013 5 629 221 333 0 36 chrX 5817351 5817435 -160832861 + ID4_ SINE ID 3 83 0 5 629 637 153 79 13 chrX 5817506 5817658 -160832638 + Lx3B LINE L1 6810 6971 -2 5 629 211 200 0 0 chrX 5817662 5817697 -160832599 + A-rich Low_complexity Low_complexity 5 39 0 5 629 413 264 32 40 chrX 5818275 5818401 -160831895 + B4A SINE B4 166 290 -2 5 629 338 356 81 28 chrX 5818527 5818738 -160831558 + L1M5 LINE L1 5488 5709 -464 5 629 1203 102 0 0 chrX 5819118 5819295 -160831001 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 5 629 517 217 0 49 chrX 5819303 5819487 -160830809 + A-rich Low_complexity Low_complexity 3 177 0 5 629 2646 211 22 3 chrX 5819674 5820320 -160829976 + L1Md_F2 LINE L1 416 1073 -5651 5 629 23 0 0 0 chrX 5820522 5820545 -160829751 + AT_rich Low_complexity Low_complexity 1 23 0 5 629 26 30 0 0 chrX 5820961 5820994 -160829302 + AT_rich Low_complexity Low_complexity 1 33 0 5 629 665 56 0 0 chrX 5821174 5821263 -160829033 + L1Md_F2 LINE L1 1037 1125 -5491 5 629 7976 54 0 1 chrX 5821267 5822247 -160828049 + L1Md_F2 LINE L1 5587 6565 -17 5 629 667 358 43 28 chrX 5823145 5823470 -160826826 - MER77 LTR ERVL -224 383 54 5 629 875 290 48 31 chrX 5825203 5825687 -160824609 - L1MA6 LINE L1 -36 6264 5773 5 629 7405 56 11 7 chrX 5825929 5827153 -160823143 - L1Md_F2 LINE L1 0 6582 5355 5 629 202 204 0 0 chrX 5827206 5827255 -160823041 + (CAGA)n Simple_repeat Simple_repeat 4 52 0 5 629 1472 77 0 5 chrX 5827739 5827935 -160822361 + B2_Mm2 SINE B2 1 195 0 5 629 751 199 64 0 chrX 5828096 5828237 -160822059 + B1_Mur4 SINE Alu 1 150 0 5 629 255 311 27 0 chrX 5828968 5829042 -160821254 + ID4_ SINE ID 1 76 -7 5 629 213 320 27 0 chrX 5828979 5829054 -160821242 + B4 SINE B4 14 90 -202 5 629 246 277 69 0 chrX 5829789 5829890 -160820406 - L1M5 LINE L1 -348 5892 5785 5 629 240 331 24 47 chrX 5830027 5830154 -160820142 + Tigger6b DNA MER2_type 1464 1587 -10 5 629 649 316 85 31 chrX 5830130 5830388 -160819908 - MER44B DNA MER2_type -264 286 15 5 629 306 265 61 10 chrX 5830435 5830534 -160819762 - L1M5 LINE L1 -1542 4604 4501 5 629 285 349 9 28 chrX 5830566 5830675 -160819621 - MLT1C LTR MaLR -81 386 280 5 629 506 270 116 100 chrX 5830807 5831136 -160819160 - MLT1B LTR MaLR 0 390 57 5 629 446 269 168 39 chrX 5831223 5831378 -160818918 + LTR41B LTR ERVL 1 175 -583 5 629 230 261 67 67 chrX 5831621 5831740 -160818556 + LTR41B LTR ERVL 565 683 -75 5 629 201 274 0 0 chrX 5831872 5831967 -160818329 + (TA)n Simple_repeat Simple_repeat 2 96 0 5 629 364 203 43 0 chrX 5831997 5832066 -160818230 - ID4_ SINE ID -8 75 4 5 629 1790 71 4 0 chrX 5832611 5832849 -160817447 + L1_Mus2 LINE L1 6327 6565 -1 5 629 29 0 0 0 chrX 5832849 5832878 -160817418 + AT_rich Low_complexity Low_complexity 1 29 0 5 629 240 333 45 96 chrX 5833856 5834055 -160816241 - RLTR1 LTR ERV1 -50 574 386 5 629 2338 204 43 16 chrX 5834637 5834757 -160815539 + RMER15 LTR ERVL 3 125 -450 5 629 225 0 0 0 chrX 5834757 5834782 -160815514 + (TCCC)n Simple_repeat Simple_repeat 1 25 0 5 629 2338 204 43 16 chrX 5834782 5835219 -160815077 + RMER15 LTR ERVL 126 574 -1 5 629 609 239 7 22 chrX 5836378 5836515 -160813781 + B1_Mur1 SINE Alu 5 139 -10 5 629 1891 100 132 6 chrX 5836578 5836889 -160813407 + RMER1A Other Other 535 884 -146 5 629 7358 51 1 1 chrX 5837145 5838318 -160811978 + L1_Mus1 LINE L1 5396 6567 0 5 629 437 319 153 32 chrX 5839226 5839475 -160810821 + LTR16A LTR ERVL 18 296 -155 5 629 2020 187 53 5 chrX 5839485 5839878 -160810418 + MTC LTR MaLR 2 413 -8 5 629 970 137 182 21 chrX 5841284 5841471 -160808825 - Lx4A LINE L1 -2 7056 6840 5 629 726 125 0 0 chrX 5841469 5841581 -160808715 + L1_Mur2 LINE L1 5445 5556 -321 5 629 231 285 172 31 chrX 5841848 5842011 -160808285 - MIR SINE MIR 0 262 77 5 629 2596 314 32 55 chrX 5842233 5843425 -160806871 + Lx7 LINE L1 6168 7331 -365 5 629 465 301 59 4 chrX 5843552 5843825 -160806471 + L1M4 LINE L1 4530 4817 -1329 5 629 1657 198 59 3 chrX 5843856 5844210 -160806086 - ORR1D1 LTR MaLR 0 374 1 5 629 282 305 12 0 chrX 5844210 5844292 -160806004 + Lx8 LINE L1 7189 7271 -202 5 629 829 192 166 0 chrX 5844297 5844490 -160805806 + URR1A DNA MER1_type 1 225 -1 5 629 554 263 37 43 chrX 5844556 5844719 -160805577 - MLT1A LTR MaLR -212 162 1 5 629 2849 233 62 8 chrX 5844759 5845482 -160804814 + Lx7 LINE L1 6595 7356 -340 5 629 480 233 0 0 chrX 5845482 5845602 -160804694 + (TATATG)n Simple_repeat Simple_repeat 4 123 0 5 629 244 244 11 22 chrX 5845662 5845754 -160804542 + Lx7 LINE L1 7589 7679 -17 5 629 216 218 127 0 chrX 5846260 5846315 -160803981 - MIR SINE MIR -106 156 95 5 629 245 281 52 59 chrX 5847349 5847485 -160802811 - L2 LINE L2 -535 2884 2750 5 629 5746 105 14 1 chrX 5847521 5848358 -160801938 + Lx2 LINE L1 6134 6981 -16 5 629 359 356 74 11 chrX 5848585 5848761 -160801535 + L1MD2 LINE L1 652 838 -5709 5 629 648 300 6 42 chrX 5848835 5848947 -160801349 + B4A SINE B4 118 228 -64 5 629 670 214 57 0 chrX 5848947 5849087 -160801209 + B1F2 SINE Alu 1 148 -1 5 629 648 300 6 42 chrX 5849087 5849141 -160801155 + B4A SINE B4 229 278 -14 5 629 333 0 0 0 chrX 5849154 5849191 -160801105 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 629 23 0 0 0 chrX 5850126 5850149 -160800147 + AT_rich Low_complexity Low_complexity 1 23 0 5 629 586 209 25 34 chrX 5850421 5850540 -160799756 + B3A SINE B2 3 120 -78 5 629 1851 296 35 32 chrX 5850679 5851419 -160798877 + Lx9 LINE L1 6358 7099 -545 5 629 604 239 15 16 chrX 5851419 5851565 -160798731 - ORR1D2 LTR MaLR -91 283 132 5 629 20422 88 3 15 chrX 5851618 5855230 -160795066 + L1Md_A LINE L1 615 4176 -1707 5 629 390 276 142 21 chrX 5855367 5855656 -160794640 + L1MC3 LINE L1 6980 7303 -482 5 629 345 271 259 15 chrX 5855649 5855915 -160794381 + L1MC3 LINE L1 7421 7751 -34 5 629 365 143 57 0 chrX 5855918 5855988 -160794308 - ORR1D2 LTR MaLR -2 368 295 5 629 392 284 97 0 chrX 5856064 5856219 -160794077 - MER68-int LTR ERVL -140 2850 2681 5 629 1165 285 69 46 chrX 5856284 5856953 -160793343 - MER68-int LTR ERVL -400 2590 1907 5 629 207 0 0 0 chrX 5856958 5856981 -160793315 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 5 629 4367 200 94 16 chrX 5857146 5858494 -160791802 + L1_Mur3 LINE L1 88 1548 -4332 5 629 559 135 0 28 chrX 5858605 5858712 -160791584 + L1_Mur3 LINE L1 1541 1644 -4236 5 629 10678 157 45 17 chrX 5858707 5859736 -160790560 + L1_Mur3 LINE L1 2462 3513 -2367 5 629 374 16 47 16 chrX 5859736 5859800 -160790496 + (TCTA)n Simple_repeat Simple_repeat 3 68 0 5 629 10678 157 45 17 chrX 5859800 5860096 -160790200 + L1_Mur3 LINE L1 3514 3812 -2068 5 629 1032 53 0 0 chrX 5860096 5860227 -160790069 + (GAAA)n Simple_repeat Simple_repeat 2 132 0 5 629 10678 157 45 17 chrX 5860227 5861185 -160789111 + L1_Mur3 LINE L1 3813 4809 -1071 5 629 1766 210 24 21 chrX 5861169 5861588 -160788708 + Lx7 LINE L1 6173 6592 -1104 5 629 7134 36 3 5 chrX 5861585 5862478 -160787818 + L1_Mus2 LINE L1 5674 6565 -1 5 629 34 0 0 0 chrX 5862526 5862560 -160787736 + AT_rich Low_complexity Low_complexity 1 34 0 5 629 916 176 85 33 chrX 5862560 5862721 -160787575 + Lx7 LINE L1 7364 7527 -169 5 629 246 62 0 0 chrX 5862721 5862753 -160787543 + (CATAT)n Simple_repeat Simple_repeat 3 34 0 5 629 916 176 85 33 chrX 5862753 5862861 -160787435 + Lx7 LINE L1 7528 7646 -50 5 629 1452 227 161 62 chrX 5862862 5863376 -160786920 + MT2B LTR ERVL 2 561 -40 5 629 369 0 0 0 chrX 5863376 5863417 -160786879 + (GA)n Simple_repeat Simple_repeat 2 42 0 5 629 1452 227 161 62 chrX 5863417 5863448 -160786848 + MT2B LTR ERVL 562 600 -1 5 629 30084 85 9 16 chrX 5863591 5866708 -160783588 + L1Md_F2 LINE L1 236 3700 -2183 5 629 7066 52 1 0 chrX 5866708 5867576 -160782720 + L1Md_F2 LINE L1 5702 6570 -12 5 629 30084 73 11 11 chrX 5867576 5869090 -160781206 + L1Md_F2 LINE L1 3701 5232 -651 5 629 198 0 0 0 chrX 5869090 5869112 -160781184 + (TA)n Simple_repeat Simple_repeat 2 23 0 5 629 30084 73 11 11 chrX 5869112 5869443 -160780853 + L1Md_F2 LINE L1 5233 5583 -300 5 629 7696 70 2 0 chrX 5869443 5870436 -160779860 + L1Md_F2 LINE L1 5587 6581 -1 5 629 254 222 21 32 chrX 5870442 5870535 -160779761 + A-rich Low_complexity Low_complexity 2 93 0 5 629 3166 88 0 0 chrX 5870755 5871196 -160779100 - Lx3_Mus LINE L1 -121 5765 5325 5 629 9200 78 11 5 chrX 5871196 5871365 -160778931 + Lx3_Mus LINE L1 5745 5913 -1096 5 629 189 0 0 0 chrX 5871365 5871386 -160778910 + (TGAA)n Simple_repeat Simple_repeat 4 24 0 5 629 9200 78 11 5 chrX 5871386 5872473 -160777823 + Lx3_Mus LINE L1 5914 7009 0 5 629 324 232 119 35 chrX 5872696 5872839 -160777457 + L1MA6 LINE L1 6134 6288 -12 5 629 230 254 61 167 chrX 5872873 5873005 -160777291 + MT2B2 LTR ERVL 139 256 -328 5 629 541 258 0 32 chrX 5872896 5873020 -160777276 + PB1 SINE Alu 6 125 -2 5 629 1066 266 69 17 chrX 5873405 5873765 -160776531 - MER68-int LTR ERVL -1879 1111 733 6 629 393 340 77 101 chrX 5873786 5874162 -160776134 + MLT1A LTR MaLR 8 374 0 6 629 1114 350 54 26 chrX 5874445 5875134 -160775162 + Lx8 LINE L1 6616 7323 -150 6 629 247 205 0 0 chrX 5875188 5875227 -160775069 - B4A SINE B4 -250 42 4 6 629 240 288 137 0 chrX 5875240 5875313 -160774983 - ID2 SINE ID 0 83 1 6 629 397 296 79 15 chrX 5875395 5875658 -160774638 + L1MA5 LINE L1 5747 6024 -276 6 629 417 235 139 36 chrX 5875886 5876023 -160774273 + RSINE1 SINE B4 1 151 -14 6 629 7738 144 32 18 chrX 5876745 5878965 -160771331 - Lx5 LINE L1 -9 7041 4779 6 629 966 149 0 0 chrX 5878965 5879106 -160771190 - B1_Mur4 SINE Alu -9 141 1 6 629 3146 34 3 0 chrX 5879142 5879520 -160770776 - L1Md_A LINE L1 0 6582 6204 6 629 552 16 0 0 chrX 5879520 5879584 -160770712 + L1Md_T LINE L1 6150 6213 -369 6 629 204 67 0 0 chrX 5880513 5880543 -160769753 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 6 629 1098 96 0 0 chrX 5880543 5880689 -160769607 - B1_Mus1 SINE Alu -2 146 1 6 629 260 257 56 42 chrX 5881855 5881997 -160768299 + L1M4 LINE L1 16 159 -6383 6 629 21 0 0 0 chrX 5882150 5882171 -160768125 + AT_rich Low_complexity Low_complexity 1 21 0 6 629 540 370 59 52 chrX 5882235 5882825 -160767471 + L1M3e LINE L1 11 604 -6426 6 629 479 82 14 0 chrX 5882934 5883007 -160767289 + (TA)n Simple_repeat Simple_repeat 2 75 0 6 629 485 307 224 27 chrX 5883298 5883700 -160766596 + L1M3e LINE L1 1358 1838 -5192 6 629 184 0 62 31 chrX 5883717 5883749 -160766547 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 6 629 400 62 31 0 chrX 5883753 5883817 -160766479 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 629 1858 119 12 62 chrX 5883874 5884213 -160766083 - RLTRETN_Mm LTR ERVK 0 322 1 6 629 5060 134 17 21 chrX 5884213 5885096 -160765200 - MMETn-int LTR ERVK 0 4844 3966 6 629 402 21 0 0 chrX 5885114 5885161 -160765135 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 629 378 262 134 41 chrX 5885214 5885308 -160764988 - L1MC2 LINE L1 -88 6256 6145 6 629 1810 131 23 91 chrX 5885308 5885661 -160764635 - ORR1A4 LTR MaLR 0 329 1 6 629 378 262 134 41 chrX 5885661 5885857 -160764439 - L1MC2 LINE L1 -200 6144 5939 6 629 303 71 0 0 chrX 5885857 5885899 -160764397 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 629 1065 106 37 48 chrX 5885924 5886113 -160764183 + L1_Mur3 LINE L1 2066 2252 -3628 6 629 5615 223 54 155 chrX 5886113 5886628 -160763668 + Lx7 LINE L1 4310 4694 -1192 6 629 1448 78 16 0 chrX 5886628 5886819 -160763477 + B2_Mm2 SINE B2 1 194 -1 6 629 5615 165 38 42 chrX 5886819 5887181 -160763115 + Lx7 LINE L1 4630 4970 -910 6 629 1045 121 51 11 chrX 5887181 5887357 -160762939 + B2_Mm2 SINE B2 3 185 -10 6 629 5615 193 36 35 chrX 5887357 5888916 -160761380 + Lx7 LINE L1 4971 6558 -1138 6 629 537 197 30 8 chrX 5888915 5889048 -160761248 - Lx7 LINE L1 -1468 6228 6093 6 629 1894 187 50 80 chrX 5889044 5889521 -160760775 + Lx7 LINE L1 6539 7001 -459 6 629 1499 118 39 19 chrX 5889519 5889766 -160760530 + Lx LINE L1 6033 6284 -370 6 629 515 126 10 10 chrX 5889766 5889870 -160760426 + Lx LINE L1 6549 6652 -2 6 629 1499 231 76 25 chrX 5889870 5890154 -160760142 + Lx LINE L1 6285 6296 -358 6 629 506 223 0 18 chrX 5890157 5890271 -160760025 - B1_Mur3 SINE Alu 0 149 38 6 629 564 175 0 43 chrX 5890284 5890445 -160759851 + G-rich Low_complexity Low_complexity 5 158 0 6 629 270 271 25 0 chrX 5890433 5890551 -160759745 + GA-rich Low_complexity Low_complexity 4 124 0 6 629 245 158 0 0 chrX 5892055 5892093 -160758203 + ID4 SINE ID 2 39 -44 6 629 189 0 0 0 chrX 5892105 5892126 -160758170 + (TAA)n Simple_repeat Simple_repeat 2 22 0 6 629 22 35 0 0 chrX 5892533 5892562 -160757734 + AT_rich Low_complexity Low_complexity 1 29 0 6 629 270 266 175 16 chrX 5893728 5893854 -160756442 - MIRb SINE MIR -11 257 112 6 629 234 261 0 0 chrX 5893886 5893932 -160756364 + ID4 SINE ID 35 80 -3 6 629 219 309 44 0 chrX 5893932 5893954 -160756342 + ID_B1 SINE B4 36 106 -118 6 629 200 316 28 93 chrX 5895572 5895680 -160754616 + L2c LINE L2 3247 3347 -40 6 629 262 286 107 32 chrX 5896521 5896715 -160753581 + MIRm SINE MIR 6 207 -61 6 629 21 0 0 0 chrX 5898048 5898069 -160752227 + AT_rich Low_complexity Low_complexity 1 21 0 6 630 411 309 28 57 chrX 5898252 5898444 -160751852 - MER5B DNA MER1_type 0 189 6 6 630 302 223 6 178 chrX 5899267 5899351 -160750945 - L1MA4A LINE L1 -412 5891 5825 6 630 476 265 181 24 chrX 5899351 5899517 -160750779 - B3A SINE B2 -6 192 1 6 630 321 183 28 78 chrX 5899517 5899634 -160750662 - L1MA4A LINE L1 -479 5824 5718 6 630 330 326 91 40 chrX 5899829 5900027 -160750269 + MIR SINE MIR 55 262 0 6 630 309 250 41 14 chrX 5900161 5900234 -160750062 - ID4_ SINE ID 0 83 9 6 630 419 236 25 27 chrX 5900241 5900363 -160749933 - B1F SINE Alu -2 147 13 6 630 1171 99 11 6 chrX 5900795 5900978 -160749318 - L1_Mus3 LINE L1 -1 6637 6454 6 630 226 268 32 16 chrX 5901149 5901223 -160749073 + B1F SINE Alu 30 139 -10 6 630 678 145 210 0 chrX 5901444 5901582 -160748714 + URR1B DNA MER1_type 1 167 -58 6 630 9374 68 30 16 chrX 5901602 5903397 -160746899 + Lx3_Mus LINE L1 5194 7008 -1 6 630 395 287 83 43 chrX 5903829 5904029 -160746267 + MIR SINE MIR 45 256 -12 6 630 246 325 114 69 chrX 5904302 5904477 -160745819 - MIRc SINE MIR -74 194 12 6 630 248 288 0 15 chrX 5904942 5905009 -160745287 - Lx9 LINE L1 -337 7307 7242 6 630 234 116 0 0 chrX 5905511 5905554 -160744742 + (TCTCTG)n Simple_repeat Simple_repeat 4 46 0 6 630 189 107 0 0 chrX 5905554 5905582 -160744714 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 630 4713 176 10 124 chrX 5905777 5905901 -160744395 - RMER1B Other Other -4 1062 941 6 630 3374 62 0 7 chrX 5905901 5906336 -160743960 + L1Md_F2 LINE L1 6141 6572 -10 6 630 4713 176 10 124 chrX 5906336 5907408 -160742888 - RMER1B Other Other -126 940 3 6 630 385 211 0 26 chrX 5907679 5907757 -160742539 + B3A SINE B2 4 79 -119 6 630 26 30 0 0 chrX 5907788 5907821 -160742475 + AT_rich Low_complexity Low_complexity 1 33 0 6 630 278 323 58 48 chrX 5908389 5908493 -160741803 - PB1 SINE Alu -22 105 1 6 630 397 260 20 20 chrX 5908573 5908671 -160741625 - B4A SINE B4 -1 291 194 6 630 324 103 0 0 chrX 5908744 5908802 -160741494 + (TCTG)n Simple_repeat Simple_repeat 1 58 0 6 630 7780 44 5 2 chrX 5909494 5910675 -160739621 - L1Md_F2 LINE L1 -1 6581 5397 6 630 3214 92 3 17 chrX 5910673 5911718 -160738578 - L1Md_F LINE L1 -4231 1652 648 6 630 2094 188 52 197 chrX 5911859 5912574 -160737722 - RMER19C LTR ERVK 0 611 1 6 630 539 347 86 14 chrX 5912667 5912945 -160737351 - Lx8 LINE L1 -218 7255 6958 6 630 1648 302 55 29 chrX 5912979 5913597 -160736699 - Lx8 LINE L1 -218 7255 6622 6 630 1151 84 0 13 chrX 5914452 5914609 -160735687 - B2_Mm2 SINE B2 -39 156 2 6 630 252 344 0 0 chrX 5914611 5914672 -160735624 - ID2 SINE ID -22 61 1 6 630 237 65 0 0 chrX 5914712 5914743 -160735553 + (TGG)n Simple_repeat Simple_repeat 1 31 0 6 630 365 0 22 0 chrX 5915525 5915570 -160734726 + (GA)n Simple_repeat Simple_repeat 1 46 0 6 630 287 290 58 116 chrX 5915609 5915730 -160734566 + PB1D10 SINE Alu 4 117 0 6 630 267 413 42 6 chrX 5916617 5916785 -160733511 + L2 LINE L2 2561 2734 -685 6 630 344 250 65 33 chrX 5916829 5916982 -160733314 + MLT1F2-int LTR MaLR 279 436 -935 6 630 1658 104 0 0 chrX 5916983 5917224 -160733072 - L1_Mur2 LINE L1 -755 5122 4882 6 630 540 302 17 69 chrX 5917247 5917421 -160732875 + MIR SINE MIR 30 194 -68 6 630 231 273 109 0 chrX 5917519 5917574 -160732722 + Charlie8 DNA MER1_type 3 63 -2365 6 630 26 0 0 0 chrX 5917858 5917884 -160732412 + AT_rich Low_complexity Low_complexity 1 26 0 6 630 408 281 70 8 chrX 5918662 5918791 -160731505 + MLT1F2 LTR MaLR 1 137 -423 6 630 2949 178 56 52 chrX 5918938 5919653 -160730643 - Lx7 LINE L1 -5 7691 6974 6 630 246 300 16 16 chrX 5919653 5919714 -160730582 + MLT1E1A LTR MaLR 520 580 -100 6 630 517 269 17 25 chrX 5919744 5919862 -160730434 - PB1D10 SINE Alu 0 117 1 6 630 1177 63 0 0 chrX 5919910 5920052 -160730244 + B1_Mus1 SINE Alu 2 143 -5 6 630 276 362 16 8 chrX 5921422 5921550 -160728746 + MIR SINE MIR 6 134 -128 6 630 376 57 0 0 chrX 5921551 5921604 -160728692 + Lx2 LINE L1 6582 6634 -363 6 630 1323 114 24 0 chrX 5921604 5921814 -160728482 + Lx2 LINE L1 6765 6979 -18 6 630 252 0 0 0 chrX 5921968 5921996 -160728300 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 630 311 325 26 26 chrX 5921997 5922114 -160728182 + PB1D10 SINE Alu 1 117 0 6 630 198 303 15 0 chrX 5922118 5922184 -160728112 + MIR SINE MIR 139 205 -57 6 630 1077 140 0 0 chrX 5922257 5922435 -160727861 + (TTC)n Simple_repeat Simple_repeat 2 179 0 6 630 414 0 0 0 chrX 5923108 5923154 -160727142 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 630 324 0 0 0 chrX 5923154 5923189 -160727107 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 630 262 286 0 0 chrX 5924574 5924637 -160725659 + MIRc SINE MIR 85 147 -121 6 630 316 331 26 7 chrX 5924753 5924908 -160725388 + L1M1 LINE L1 5636 5793 -510 6 630 271 215 0 0 chrX 5924909 5924974 -160725322 + (TA)n Simple_repeat Simple_repeat 1 65 0 6 630 1083 323 134 29 chrX 5925062 5925879 -160724417 + Charlie25 DNA MER1_type 1199 2208 -316 6 630 919 276 67 9 chrX 5925917 5926200 -160724096 + Lx9 LINE L1 7198 7490 -154 6 630 249 33 0 0 chrX 5926200 5926230 -160724066 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 630 919 276 67 9 chrX 5926230 5926366 -160723930 + Lx9 LINE L1 7491 7640 -4 6 630 358 339 130 8 chrX 5926378 5926509 -160723787 + RSINE1 SINE B4 4 150 -15 6 630 22 0 0 0 chrX 5926521 5926543 -160723753 + AT_rich Low_complexity Low_complexity 1 22 0 6 630 1130 70 14 0 chrX 5926805 5926947 -160723349 + B1_Mus2 SINE Alu 2 145 -2 7 630 24 0 0 0 chrX 5926971 5926995 -160723301 + AT_rich Low_complexity Low_complexity 1 24 0 7 630 1102 170 14 5 chrX 5927096 5927303 -160722993 - Lx6 LINE L1 0 7460 7252 7 630 7249 206 84 26 chrX 5927445 5930718 -160719578 - Lx9 LINE L1 -85 7559 4098 7 630 187 269 42 126 chrX 5930761 5930880 -160719416 + MIR SINE MIR 110 218 -44 7 630 420 20 0 0 chrX 5930979 5931028 -160719268 + (TC)n Simple_repeat Simple_repeat 2 50 0 7 630 387 0 0 0 chrX 5931028 5931070 -160719226 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 630 487 233 0 140 chrX 5931585 5931735 -160718561 + B3A SINE B2 1 129 -69 7 630 462 18 0 0 chrX 5931736 5931791 -160718505 + (TC)n Simple_repeat Simple_repeat 2 56 0 7 630 384 77 0 0 chrX 5931791 5931842 -160718454 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 630 550 286 0 0 chrX 5931937 5932049 -160718247 + ID_B1 SINE B4 13 124 -100 7 630 294 296 60 20 chrX 5932082 5932182 -160718114 + PB1 SINE Alu 19 122 -5 7 630 338 225 0 0 chrX 5932219 5932299 -160717997 - L1_Mur3 LINE L1 -1603 4277 4198 7 630 594 282 92 6 chrX 5932352 5932583 -160717713 + MER63B DNA AcHobo 167 431 -5 7 630 3324 188 45 10 chrX 5932749 5933520 -160716776 + Lx5 LINE L1 5925 6768 -290 7 630 217 355 100 68 chrX 5933681 5933962 -160716334 - L2c LINE L2 -49 3338 3049 7 630 468 278 196 32 chrX 5935896 5936141 -160714155 + L1MB4 LINE L1 52 352 -6255 7 630 192 97 0 0 chrX 5936141 5936172 -160714124 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 7 630 468 278 196 32 chrX 5936172 5936268 -160714028 + L1MB4 LINE L1 353 449 -6158 7 630 346 317 53 12 chrX 5936322 5936491 -160713805 + L1MB4 LINE L1 546 721 -5886 7 630 1171 63 108 11 chrX 5936578 5936754 -160713542 + B2_Mm1t SINE B2 1 193 0 7 630 3696 73 9 41 chrX 5936849 5937380 -160712916 + L1_Mus2 LINE L1 6053 6566 0 7 630 236 288 166 15 chrX 5937380 5937705 -160712591 + L1MB4 LINE L1 3584 3957 -2790 7 630 294 338 38 0 chrX 5937708 5937807 -160712489 + B1F SINE Alu 6 109 -11 7 630 459 0 0 0 chrX 5937821 5937872 -160712424 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 7 630 719 276 135 40 chrX 5937895 5938078 -160712218 + L1MB4 LINE L1 3945 4150 -2591 7 630 1088 98 0 0 chrX 5938078 5938221 -160712075 + B1_Mus2 SINE Alu 3 145 -2 7 630 874 263 128 28 chrX 5938221 5938720 -160711576 + L1MB4 LINE L1 4151 4698 -2049 7 630 294 165 59 99 chrX 5938716 5938817 -160711479 + L1MB4 LINE L1 5053 5149 -1598 7 630 1457 298 69 7 chrX 5938800 5939499 -160710797 + L1MB4 LINE L1 5387 6128 -52 7 630 266 327 52 78 chrX 5939958 5940074 -160710222 + PB1D9 SINE Alu 1 113 -7 7 630 23 0 0 0 chrX 5940280 5940303 -160709993 + AT_rich Low_complexity Low_complexity 1 23 0 7 630 416 376 82 28 chrX 5940364 5940717 -160709579 - L2c LINE L2 -429 2990 2619 7 630 274 292 135 0 chrX 5940763 5940852 -160709444 + MER58A DNA MER1_type 12 112 -112 7 630 423 0 0 0 chrX 5940855 5940902 -160709394 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 630 186 43 0 0 chrX 5940902 5940924 -160709372 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 630 263 323 87 16 chrX 5941355 5941481 -160708815 - MIR SINE MIR -31 231 97 7 630 888 140 23 0 chrX 5941750 5941921 -160708375 + (TATATG)n Simple_repeat Simple_repeat 3 177 0 7 630 241 145 32 0 chrX 5942151 5942213 -160708083 + (CAAA)n Simple_repeat Simple_repeat 1 64 0 7 630 836 98 33 0 chrX 5942288 5942410 -160707886 + B1_Mus2 SINE Alu 1 126 -21 7 630 254 351 45 0 chrX 5943479 5943590 -160706706 - MIRb SINE MIR -48 220 105 7 630 293 311 50 22 chrX 5943630 5943811 -160706485 + L1MB8 LINE L1 5915 6100 -78 7 630 561 160 41 32 chrX 5943913 5944036 -160706260 - Lx9 LINE L1 0 7644 7521 7 630 297 289 41 0 chrX 5944276 5944397 -160705899 - L1_Rod LINE L1 -13 5834 5709 7 630 400 324 40 47 chrX 5944437 5944690 -160705606 + L1MC4 LINE L1 7400 7650 -392 7 630 198 0 0 0 chrX 5945530 5945552 -160704744 + (TG)n Simple_repeat Simple_repeat 2 23 0 7 630 598 148 41 8 chrX 5945553 5945676 -160704620 + Lx9 LINE L1 7518 7644 0 7 630 322 343 67 24 chrX 5946215 5946424 -160703872 - L2 LINE L2 -828 2591 2374 7 630 324 0 0 0 chrX 5946982 5947018 -160703278 + (TAGG)n Simple_repeat Simple_repeat 2 37 0 7 630 310 249 136 38 chrX 5947307 5947503 -160702793 + MTEa LTR MaLR 151 371 -8 7 630 435 186 23 0 chrX 5947501 5947587 -160702709 + MTE-int LTR MaLR 1304 1391 -189 7 630 273 301 0 88 chrX 5947660 5947762 -160702534 + MIRb SINE MIR 125 217 -51 7 630 340 224 15 0 chrX 5947795 5947862 -160702434 + ID4_ SINE ID 3 70 -13 7 630 701 244 75 25 chrX 5948382 5948522 -160701774 + B3A SINE B2 2 152 -46 7 630 279 0 0 0 chrX 5948522 5948553 -160701743 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 630 306 0 0 0 chrX 5948553 5948586 -160701710 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 630 701 244 75 25 chrX 5948586 5948604 -160701692 + B3A SINE B2 153 168 -30 7 630 589 306 52 59 chrX 5948605 5948876 -160701420 - MLT1A0 LTR MaLR -96 269 1 7 630 285 291 67 19 chrX 5948877 5948982 -160701314 - MIR SINE MIR -42 220 111 7 630 4967 253 28 31 chrX 5949141 5950478 -160699818 - Lx5 LINE L1 -4 7046 5714 7 630 2691 121 5 5 chrX 5950470 5950884 -160699412 + L1_Mm LINE L1 4861 5274 -609 7 630 4768 49 2 0 chrX 5950883 5951458 -160698838 - L1_Mm LINE L1 -236 5647 5072 7 630 238 280 42 93 chrX 5951458 5951576 -160698720 + RMER4B LTR ERVK 446 557 -28 7 630 2216 67 3 0 chrX 5951832 5952115 -160698181 - L1_Mm LINE L1 -291 5592 5309 7 630 6735 47 1 5 chrX 5952115 5952893 -160697403 + L1Md_F2 LINE L1 5808 6582 0 7 630 1078 248 15 37 chrX 5952893 5952942 -160697354 - L1M2 LINE L1 -975 5337 5296 7 630 386 145 26 0 chrX 5952953 5953029 -160697267 + GA-rich Low_complexity Low_complexity 2 79 0 7 630 3874 110 23 0 chrX 5953042 5953605 -160696691 + L1_Mm LINE L1 5129 5704 -179 7 630 10560 154 30 17 chrX 5953606 5955535 -160694761 - L1_Mur2 LINE L1 -422 5455 3502 7 630 1299 167 60 16 chrX 5956539 5956813 -160693483 - ORR1C2 LTR MaLR 0 379 103 7 630 1187 135 62 5 chrX 5956820 5957014 -160693282 + URR1A DNA MER1_type 19 223 -3 7 630 315 309 18 9 chrX 5957029 5957140 -160693156 - Lx6 LINE L1 -899 6574 6463 7 630 1083 166 59 34 chrX 5957441 5957678 -160692618 - Lx7 LINE L1 0 7696 7454 7 630 1025 168 15 25 chrX 5957678 5957874 -160692422 - Lx7 LINE L1 -781 6915 6722 7 630 12065 203 127 21 chrX 5957860 5960586 -160689710 - Lx6 LINE L1 -1061 6399 3097 7 630 191 36 0 35 chrX 5960586 5960615 -160689681 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 7 630 12065 145 84 21 chrX 5960615 5960912 -160689384 - Lx6 LINE L1 -2784 3096 2776 7 630 4193 153 25 45 chrX 5960912 5961618 -160688678 - RLTR17 LTR ERVK 0 692 1 7 630 12065 145 84 21 chrX 5961618 5961647 -160688649 - Lx6 LINE L1 -3105 2775 2747 7 630 591 15 0 0 chrX 5961647 5961715 -160688581 + (TCC)n Simple_repeat Simple_repeat 3 70 0 7 630 12065 145 84 21 chrX 5961715 5962667 -160687629 - Lx6 LINE L1 -3134 2746 1770 7 630 9743 98 28 12 chrX 5962666 5964305 -160685991 + Lx2A1 LINE L1 5338 7004 -4 7 630 1272 158 4 36 chrX 5964343 5964593 -160685703 - Lx6 LINE L1 -4106 1774 1533 7 630 965 76 76 0 chrX 5964596 5964727 -160685569 + B2_Mm2 SINE B2 4 144 -51 7 630 321 82 0 0 chrX 5964741 5964790 -160685506 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 630 287 57 0 0 chrX 5964791 5964826 -160685470 - B2_Mm2 SINE B2 -60 135 101 7 630 2593 188 91 13 chrX 5964826 5965950 -160684346 - Lx6 LINE L1 -4489 1391 85 7 630 369 337 25 40 chrX 5965958 5966156 -160684140 + MIRb SINE MIR 50 244 -24 7 630 337 333 114 13 chrX 5966689 5966926 -160683370 - MIR SINE MIR -1 261 1 7 630 201 276 69 0 chrX 5966969 5967027 -160683269 + MIRm SINE MIR 214 275 -1 7 630 609 14 0 0 chrX 5967325 5967395 -160682901 + (CA)n Simple_repeat Simple_repeat 2 71 0 7 630 557 55 0 72 chrX 5967689 5967786 -160682510 + L1Md_F2 LINE L1 6493 6582 0 7 630 423 0 0 0 chrX 5967817 5967864 -160682432 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 630 664 189 95 36 chrX 5967924 5968061 -160682235 + B1_Mus2 SINE Alu 1 145 -2 7 630 343 253 13 13 chrX 5968313 5968389 -160681907 + ID4_ SINE ID 2 77 -6 7 630 1212 58 0 0 chrX 5968654 5968792 -160681504 - B1_Mus2 SINE Alu -9 138 1 7 630 182 286 24 0 chrX 5968964 5969006 -160681290 - L2b LINE L2 -23 3352 3310 7 630 1288 48 0 0 chrX 5969675 5969822 -160680474 + B1_Mm SINE Alu 1 147 0 7 630 186 133 0 0 chrX 5969822 5969852 -160680444 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 7 630 1033 150 0 0 chrX 5970174 5970314 -160679982 + B1_Mus1 SINE Alu 2 141 -7 7 630 240 330 8 102 chrX 5970550 5970668 -160679628 - PB1D7 SINE Alu -1 119 13 7 630 434 18 18 0 chrX 5970708 5970763 -160679533 + (TG)n Simple_repeat Simple_repeat 1 56 0 7 630 182 98 0 47 chrX 5971324 5971367 -160678929 + (CAGAGA)n Simple_repeat Simple_repeat 4 44 0 7 630 354 262 25 0 chrX 5972052 5972132 -160678164 + ID4_ SINE ID 2 83 0 7 630 354 156 0 0 chrX 5972182 5972246 -160678050 + A-rich Low_complexity Low_complexity 1 64 0 7 630 26 64 0 0 chrX 5973376 5973423 -160676873 + AT_rich Low_complexity Low_complexity 1 47 0 7 630 998 257 105 6 chrX 5973431 5973744 -160676552 - Lx8 LINE L1 -30 7443 7100 7 630 738 276 26 26 chrX 5973832 5974022 -160676274 - B3A SINE B2 -8 190 1 7 630 1247 61 0 26 chrX 5974254 5974405 -160675891 - B1_Mm SINE Alu 0 147 1 7 630 530 323 10 26 chrX 5975037 5975231 -160675065 - MIRc SINE MIR -44 224 34 7 630 308 253 0 39 chrX 5975431 5975509 -160674787 + ID4_ SINE ID 1 75 -8 7 630 309 89 0 0 chrX 5975509 5975554 -160674742 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 630 195 129 0 0 chrX 5977038 5977069 -160673227 + (CCCCCT)n Simple_repeat Simple_repeat 6 36 0 7 630 189 94 0 0 chrX 5977137 5977169 -160673127 + (CGCGG)n Simple_repeat Simple_repeat 3 34 0 7 630 198 0 0 0 chrX 5979001 5979023 -160671273 + (CCCCCA)n Simple_repeat Simple_repeat 5 26 0 7 630 510 17 0 0 chrX 5979442 5979501 -160670795 + (TG)n Simple_repeat Simple_repeat 2 60 0 8 630 1206 85 0 0 chrX 5981095 5981424 -160668872 + (TCC)n Simple_repeat Simple_repeat 1 329 0 8 630 1125 84 7 7 chrX 5981424 5981567 -160668729 - B1_Mus1 SINE Alu -5 143 1 8 630 228 143 0 0 chrX 5982205 5982247 -160668049 + (CCCCAG)n Simple_repeat Simple_repeat 4 45 0 8 630 297 232 127 28 chrX 5983401 5983472 -160666824 - ID2 SINE ID -4 79 2 8 630 443 291 68 62 chrX 5983609 5983785 -160666511 + B3A SINE B2 5 181 -17 8 630 432 55 0 0 chrX 5983869 5983924 -160666372 + (TG)n Simple_repeat Simple_repeat 1 55 0 8 630 1063 258 33 15 chrX 5983958 5984229 -160666067 - B4A SINE B4 -12 280 5 8 630 270 81 0 0 chrX 5984550 5984587 -160665709 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 630 243 234 0 0 chrX 5984589 5984636 -160665660 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 630 369 378 42 21 chrX 5987180 5987369 -160662927 - MIRb SINE MIR -20 248 56 8 630 380 230 19 48 chrX 5987414 5987519 -160662777 - BC1_Mm scRNA scRNA -43 109 8 8 630 183 42 0 0 chrX 5987716 5987740 -160662556 + (TG)n Simple_repeat Simple_repeat 2 25 0 8 630 279 0 0 0 chrX 5987762 5987793 -160662503 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 630 293 151 191 36 chrX 5988040 5988150 -160662146 + Lx9 LINE L1 7517 7643 -1 8 630 408 158 0 0 chrX 5988481 5988557 -160661739 + (CAAT)n Simple_repeat Simple_repeat 4 79 0 8 630 3142 71 7 51 chrX 5991485 5991917 -160658379 - L1_Mus2 LINE L1 0 6566 6154 8 630 291 203 0 0 chrX 5992476 5992545 -160657751 + (TG)n Simple_repeat Simple_repeat 1 69 0 8 630 218 311 191 0 chrX 5993535 5993655 -160656641 - MIRb SINE MIR -126 142 1 8 630 234 128 0 0 chrX 5994031 5994070 -160656226 + (T)n Simple_repeat Simple_repeat 1 39 0 8 630 324 0 0 0 chrX 5994605 5994641 -160655655 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 630 322 261 17 43 chrX 5994642 5994758 -160655538 - L1MC4a LINE L1 -1948 5934 5822 8 630 283 336 212 21 chrX 5995130 5995413 -160654883 + L2 LINE L2 2443 2779 -640 8 630 1207 63 28 23 chrX 5995916 5995930 -160654366 + MT2C_Mm LTR ERVL 290 304 -171 8 630 696 24 0 0 chrX 5995930 5996012 -160654284 + (TC)n Simple_repeat Simple_repeat 2 83 0 8 630 1207 63 28 23 chrX 5996012 5996174 -160654122 + MT2C_Mm LTR ERVL 305 467 -8 8 630 186 71 0 0 chrX 5997205 5997233 -160653063 + (CCCCCA)n Simple_repeat Simple_repeat 4 31 0 8 630 358 304 105 64 chrX 5997992 5998164 -160652132 - ORR1E LTR MaLR -186 179 1 8 630 1690 254 129 18 chrX 5998203 5998831 -160651465 - L1MB1 LINE L1 0 6168 5471 8 630 273 165 65 30 chrX 5998842 5998921 -160651375 - L1MB1 LINE L1 -796 5393 5309 8 630 932 167 0 7 chrX 5998928 5999067 -160651229 - B1_Mur4 SINE Alu -12 138 1 8 630 1186 57 139 0 chrX 5999083 5999241 -160651055 - B2_Mm2 SINE B2 -14 181 2 8 630 324 246 180 0 chrX 5999354 5999476 -160650820 - L1MB1 LINE L1 -867 5273 5130 8 630 198 0 0 0 chrX 5999507 5999529 -160650767 + (T)n Simple_repeat Simple_repeat 1 22 0 8 630 1179 56 35 0 chrX 5999529 5999671 -160650625 - B1_Mus2 SINE Alu 0 147 1 8 630 326 225 81 52 chrX 5999758 5999894 -160650402 - L1MB1 LINE L1 -1311 4832 4693 8 630 469 240 25 28 chrX 6000003 6000174 -160650122 - L1MA5 LINE L1 -308 5848 5675 1 630 302 319 62 77 chrX 6000174 6000306 -160649990 - L1M3de LINE L1 -1448 5284 5154 2 630 1223 174 209 56 chrX 6000306 6000494 -160649802 + MTD LTR MaLR 2 239 -180 3 630 239 54 0 26 chrX 6000494 6000532 -160649764 + (CAAG)n Simple_repeat Simple_repeat 2 38 0 4 630 1223 174 209 56 chrX 6000532 6000702 -160649594 + MTD LTR MaLR 240 415 -4 3 630 302 319 62 77 chrX 6000702 6000841 -160649455 - L1M3de LINE L1 -1579 5153 5017 2 630 720 147 76 23 chrX 6000842 6000974 -160649322 - B1_Mus2 SINE Alu 0 147 9 5 630 692 248 0 0 chrX 6001132 6001273 -160649023 - B1F SINE Alu -6 143 3 6 630 1474 251 108 31 chrX 6001276 6002037 -160648259 - L1M3de LINE L1 -1832 4894 4046 2 630 234 0 0 0 chrX 6002044 6002070 -160648226 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 7 630 832 128 15 29 chrX 6002084 6002221 -160648075 + B1_Mur3 SINE Alu 3 137 -12 8 630 621 0 0 0 chrX 6002221 6002290 -160648006 + (CAAAA)n Simple_repeat Simple_repeat 3 71 0 9 630 856 216 101 21 chrX 6002302 6002491 -160647805 + B3 SINE B2 1 204 -12 1 630 1332 257 153 12 chrX 6002508 6003111 -160647185 - L1M3de LINE L1 -3232 3494 2807 2 630 749 303 76 11 chrX 6003113 6003390 -160646906 + MER2 DNA MER2_type 2 296 -49 1 630 286 215 8 108 chrX 6003466 6003528 -160646768 - L1M3de LINE L1 -3923 2803 2749 2 630 3491 76 55 6 chrX 6003528 6004018 -160646278 - L1Md_F2 LINE L1 0 6582 6069 1 630 286 215 8 108 chrX 6004018 6004075 -160646221 - L1M3de LINE L1 -3978 2748 2696 2 630 2108 118 13 84 chrX 6004297 6004678 -160645618 - ORR1B1 LTR MaLR 0 394 41 1 630 438 20 0 0 chrX 6004721 6004772 -160645524 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 630 5345 13 0 3 chrX 6005086 6005690 -160644606 - L1Md_A LINE L1 0 6582 5981 1 630 1003 305 126 20 chrX 6005691 6006625 -160643671 - L1M3de LINE L1 -4529 2124 1335 2 630 189 0 0 0 chrX 6007354 6007375 -160642921 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 1 630 446 340 33 0 chrX 6007388 6007538 -160642758 - RSINE1 SINE B4 -1 164 10 1 630 304 266 25 12 chrX 6008100 6008180 -160642116 - ID4_ SINE ID -2 81 1 1 630 270 0 0 0 chrX 6008381 6008411 -160641885 + (T)n Simple_repeat Simple_repeat 1 30 0 1 630 1189 55 0 0 chrX 6008411 6008557 -160641739 - B1_Mus2 SINE Alu 0 147 2 2 630 544 292 102 28 chrX 6008679 6009151 -160641145 - L1MC LINE L1 -1469 4677 4171 2 630 606 233 203 11 chrX 6009240 6009501 -160640795 - L1MB1 LINE L1 -40 6128 5818 2 630 919 251 36 0 chrX 6009533 6009728 -160640568 - B3 SINE B2 -14 202 1 2 630 403 279 115 0 chrX 6009770 6009892 -160640404 - RSINE1 SINE B4 -17 148 13 2 630 264 283 40 40 chrX 6010001 6010126 -160640170 + MIR SINE MIR 104 228 -34 2 630 261 0 0 0 chrX 6010141 6010170 -160640126 + (TC)n Simple_repeat Simple_repeat 2 30 0 2 630 333 0 0 0 chrX 6010170 6010206 -160640090 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 630 272 261 14 0 chrX 6010603 6010672 -160639624 - CR1_Mam LINE CR1 -438 1766 1697 2 630 214 178 0 0 chrX 6011250 6011295 -160639001 + (CAA)n Simple_repeat Simple_repeat 2 46 0 2 630 237 278 27 134 chrX 6011375 6011487 -160638809 - ORR1D2 LTR MaLR -246 124 25 3 630 435 295 62 62 chrX 6011557 6011734 -160638562 - MLT1A LTR MaLR -197 177 1 3 630 501 337 35 24 chrX 6012991 6013048 -160637248 + ID SINE ID 22 80 -144 3 630 566 311 15 0 chrX 6013048 6013183 -160637113 + B1F SINE Alu 3 139 -10 3 630 503 306 74 33 chrX 6013313 6013556 -160636740 - MIR SINE MIR -2 260 8 3 630 1222 41 0 0 chrX 6014040 6014187 -160636109 - B1_Mm SINE Alu 0 147 1 3 630 348 313 87 13 chrX 6014396 6014545 -160635751 - MER5A1 DNA MER1_type 0 166 7 3 630 916 139 14 0 chrX 6015297 6015441 -160634855 + B1_Mur4 SINE Alu 5 150 0 3 630 301 272 126 49 chrX 6015510 6015653 -160634643 - L1M5 LINE L1 -284 5840 5687 3 630 3435 89 18 23 chrX 6016235 6016750 -160633546 + L1_Mus4 LINE L1 6122 6633 -3 3 630 300 197 41 27 chrX 6016912 6017058 -160633238 + (TA)n Simple_repeat Simple_repeat 1 148 0 4 630 2858 116 75 20 chrX 6017075 6017569 -160632727 + MT-int LTR MaLR 527 1047 -51 4 630 36 23 0 0 chrX 6017569 6017612 -160632684 + AT_rich Low_complexity Low_complexity 1 43 0 4 630 268 192 58 29 chrX 6017758 6017930 -160632366 + (TA)n Simple_repeat Simple_repeat 2 178 0 4 630 316 269 0 25 chrX 6018914 6018994 -160631302 - ID4_ SINE ID -1 82 5 4 630 1513 213 85 12 chrX 6019000 6019319 -160630977 + Lx6 LINE L1 6948 7289 -171 4 630 180 200 0 0 chrX 6019321 6019361 -160630935 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 4 630 392 288 21 7 chrX 6019399 6019539 -160630757 + Lx7 LINE L1 7189 7330 -366 4 630 213 65 0 0 chrX 6019584 6019615 -160630681 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 630 236 229 45 54 chrX 6019649 6019760 -160630536 + Lx7 LINE L1 7585 7694 -2 4 630 690 279 104 55 chrX 6019888 6020306 -160629990 - RMER15 LTR ERVL -1 574 14 4 630 23 0 0 0 chrX 6021075 6021098 -160629198 + AT_rich Low_complexity Low_complexity 1 23 0 5 630 489 17 0 0 chrX 6021490 6021548 -160628748 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 630 182 289 81 46 chrX 6021772 6021859 -160628437 + L2c LINE L2 3298 3387 0 5 630 39 50 0 0 chrX 6021930 6021990 -160628306 + AT_rich Low_complexity Low_complexity 1 60 0 5 630 507 33 0 0 chrX 6022962 6023023 -160627273 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 630 621 206 21 56 chrX 6023023 6023167 -160627129 - ID_B1 SINE B4 -4 220 82 5 630 1642 97 0 0 chrX 6023179 6023405 -160626891 - L1_Mus2 LINE L1 0 6566 6341 5 630 508 223 125 46 chrX 6024740 6024868 -160625428 - Lx9 LINE L1 -3 7641 7495 5 630 348 24 0 0 chrX 6024868 6024909 -160625387 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 630 508 223 125 46 chrX 6024909 6025020 -160625276 - Lx9 LINE L1 -150 7494 7384 5 630 1347 72 0 0 chrX 6025578 6025758 -160624538 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 5 630 213 39 0 0 chrX 6025760 6025786 -160624510 + (TCCCC)n Simple_repeat Simple_repeat 5 30 0 6 630 242 327 0 47 chrX 6025786 6025892 -160624404 + CT-rich Low_complexity Low_complexity 4 104 0 6 630 343 0 43 0 chrX 6026741 6026788 -160623508 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 6 630 21 0 0 0 chrX 6027064 6027085 -160623211 + AT_rich Low_complexity Low_complexity 1 21 0 6 630 1191 112 0 0 chrX 6027469 6027648 -160622648 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 6 630 529 246 17 9 chrX 6027751 6027866 -160622430 - PB1 SINE Alu -7 120 5 6 630 266 247 37 12 chrX 6028841 6028923 -160621373 - L1M5 LINE L1 -1148 4998 4915 6 630 299 250 10 20 chrX 6029031 6029129 -160621167 + CT-rich Low_complexity Low_complexity 1 97 0 6 630 260 258 0 61 chrX 6029216 6029282 -160621014 + tRNA-Ala-GCY_ tRNA tRNA 14 75 0 6 78 256 259 0 17 chrX 6029282 6029341 -160620955 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 631 189 265 68 81 chrX 6029511 6029585 -160620711 - L2c LINE L2 -47 3340 3268 7 631 638 283 47 32 chrX 6029650 6029928 -160620368 + L1M4 LINE L1 5333 5614 -570 7 631 486 347 46 40 chrX 6029930 6030285 -160620011 + ORR1E LTR MaLR 1 345 -25 7 631 285 51 0 0 chrX 6030285 6030324 -160619972 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 7 631 885 323 65 58 chrX 6030366 6030965 -160619331 + MTE-int LTR MaLR 71 803 -777 7 631 297 270 7 223 chrX 6031565 6031713 -160618583 - ID_B1 SINE B4 -98 126 11 7 631 435 19 0 0 chrX 6031877 6031929 -160618367 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 631 922 206 34 11 chrX 6032140 6032317 -160617979 - B3A SINE B2 -16 182 2 7 631 225 65 0 0 chrX 6032735 6032766 -160617530 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 631 227 171 13 38 chrX 6035833 6035912 -160614384 + CT-rich Low_complexity Low_complexity 1 77 0 7 631 1210 192 5 5 chrX 6035927 6036141 -160614155 - Lx6 LINE L1 -254 7206 6993 8 631 845 147 83 42 chrX 6036152 6036344 -160613952 - RMER1C Other Other -8 1334 1135 8 631 382 254 67 8 chrX 6036376 6036495 -160613801 - RMER1C Other Other -1188 154 29 8 631 32 0 0 0 chrX 6036663 6036695 -160613601 + AT_rich Low_complexity Low_complexity 1 32 0 8 631 3093 175 52 19 chrX 6036809 6037448 -160612848 - Lx6 LINE L1 -454 7006 6347 8 631 9641 191 77 54 chrX 6037446 6039590 -160610706 + Lx7 LINE L1 2633 4795 -1085 8 631 188 34 0 33 chrX 6039590 6039620 -160610676 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 8 631 9641 191 77 54 chrX 6039620 6040035 -160610261 + Lx7 LINE L1 4796 5241 -639 8 631 351 0 0 0 chrX 6040035 6040074 -160610222 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 631 9641 191 77 54 chrX 6040074 6040501 -160609795 + Lx7 LINE L1 5242 5688 -192 8 631 1879 184 49 5 chrX 6040514 6040923 -160609373 + Lx7 LINE L1 5928 6354 -1342 8 631 267 31 0 0 chrX 6041410 6041442 -160608854 + (GA)n Simple_repeat Simple_repeat 1 32 0 8 631 290 213 16 0 chrX 6041444 6041505 -160608791 + RSINE1 SINE B4 94 155 -10 8 631 1257 41 0 0 chrX 6042141 6042287 -160608009 + B1_Mus2 SINE Alu 1 146 -1 8 631 231 60 19 39 chrX 6042288 6042340 -160607956 + (CAAAAA)n Simple_repeat Simple_repeat 4 54 0 9 631 1029 64 113 0 chrX 6042362 6042503 -160607793 + B2_Mm2 SINE B2 2 158 -37 9 631 234 0 0 0 chrX 6042505 6042531 -160607765 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 9 631 1020 243 121 26 chrX 6042922 6043210 -160607086 - MTEa LTR MaLR 0 379 59 9 631 207 0 0 0 chrX 6043210 6043233 -160607063 + (CAGA)n Simple_repeat Simple_repeat 1 23 0 9 631 423 0 0 0 chrX 6043234 6043281 -160607015 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 631 1020 243 121 26 chrX 6043281 6043336 -160606960 - MTEa LTR MaLR -321 58 4 9 631 214 309 62 0 chrX 6044080 6044161 -160606135 + PB1 SINE Alu 34 119 -8 9 631 787 138 45 26 chrX 6044810 6044966 -160605330 + URR1A DNA MER1_type 68 226 0 9 631 274 326 46 8 chrX 6046511 6046641 -160603655 + L2c LINE L2 2998 3132 -255 9 631 184 361 60 0 chrX 6047716 6047799 -160602497 - MIRb SINE MIR -173 95 8 9 631 882 78 148 0 chrX 6048614 6048742 -160601554 - B1_Mus2 SINE Alu 0 147 1 1 631 339 270 14 143 chrX 6049239 6049386 -160600910 + RMER30 DNA MER1_type 6 133 -69 1 631 274 326 46 8 chrX 6049850 6049980 -160600316 + L2c LINE L2 2998 3132 -255 1 631 249 244 0 0 chrX 6050728 6050769 -160599527 - tRNA-Ile-ATA tRNA tRNA -36 41 1 1 631 2571 264 58 68 chrX 6050813 6051894 -160598402 - Lx9 LINE L1 -85 7559 6490 1 631 234 330 82 31 chrX 6053239 6053336 -160596960 + PB1D10 SINE Alu 7 108 -9 1 631 289 276 60 18 chrX 6053337 6053503 -160596793 - L1M4b LINE L1 -5723 1611 1439 1 631 303 324 121 6 chrX 6053757 6053806 -160596490 - L1M4b LINE L1 -6235 1099 1049 1 631 3247 41 7 33 chrX 6053806 6054235 -160596061 - L1Md_F2 LINE L1 0 6582 6165 1 631 303 324 121 6 chrX 6054235 6054359 -160595937 - L1M4b LINE L1 -6286 1048 908 1 631 293 338 28 18 chrX 6054652 6054777 -160595519 - PB1D7 SINE Alu -23 126 1 1 631 449 298 1 0 chrX 6054785 6054899 -160595397 - B1F1 SINE Alu -1 119 5 1 631 495 360 129 43 chrX 6054932 6055304 -160594992 - L1M4b LINE L1 -6647 687 284 1 631 443 63 16 0 chrX 6055362 6055425 -160594871 + (TG)n Simple_repeat Simple_repeat 2 65 0 1 631 384 119 0 0 chrX 6055448 6055507 -160594789 + (TCCA)n Simple_repeat Simple_repeat 3 61 0 1 631 393 294 54 63 chrX 6055507 6055708 -160594588 - L1M4b LINE L1 -5626 1708 1497 1 631 320 171 49 62 chrX 6055708 6055789 -160594507 + ID4 SINE ID 2 81 -2 1 631 393 294 54 63 chrX 6055789 6055903 -160594393 - L1M4b LINE L1 -5838 1496 1397 1 631 213 271 42 0 chrX 6055999 6056047 -160594249 - ID SINE ID -140 84 35 1 631 261 305 0 63 chrX 6056004 6056067 -160594229 - tRNA-Ala-GCY_ tRNA tRNA -5 70 12 1 631 1177 36 0 0 chrX 6056155 6056293 -160594003 - B1_Mus1 SINE Alu -7 141 4 1 631 225 0 0 0 chrX 6056307 6056332 -160593964 + (TTG)n Simple_repeat Simple_repeat 3 27 0 1 631 261 0 0 0 chrX 6056332 6056361 -160593935 + (ATG)n Simple_repeat Simple_repeat 1 29 0 1 631 243 211 0 0 chrX 6056363 6056415 -160593881 - L1M4b LINE L1 -6068 1266 1215 1 631 1163 113 20 15 chrX 6056710 6056907 -160593389 - L1Md_F2 LINE L1 -2 6580 6383 1 631 5698 123 12 42 chrX 6056910 6058350 -160591946 - L1Md_F LINE L1 -4418 1465 98 1 631 830 122 14 21 chrX 6058401 6058544 -160591752 - B1_Mur3 SINE Alu -6 143 2 1 631 534 313 60 8 chrX 6058847 6059095 -160591201 - L1M4b LINE L1 -7014 320 60 1 631 706 229 128 6 chrX 6059182 6059444 -160590852 + L1MB8 LINE L1 5599 5889 -2106 1 631 808 279 48 13 chrX 6059449 6059678 -160590618 + B4 SINE B4 24 260 -32 1 631 504 117 0 0 chrX 6059685 6059762 -160590534 + (CA)n Simple_repeat Simple_repeat 1 77 0 1 631 533 15 0 15 chrX 6059772 6059839 -160590457 + (GAGAA)n Simple_repeat Simple_repeat 4 69 0 1 631 335 222 6 122 chrX 6059964 6060128 -160590168 + L1MB8 LINE L1 6030 6174 -4 1 631 263 229 0 0 chrX 6060147 6060208 -160590088 + (TCTCTG)n Simple_repeat Simple_repeat 4 64 0 1 631 201 211 0 0 chrX 6060208 6060260 -160590036 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 631 360 0 0 0 chrX 6060390 6060430 -160589866 + (TATG)n Simple_repeat Simple_repeat 1 40 0 1 631 387 0 0 0 chrX 6061315 6061358 -160588938 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 631 191 152 0 0 chrX 6061841 6061874 -160588422 + MIRc SINE MIR 125 157 -111 1 631 569 168 36 16 chrX 6062367 6062655 -160587641 + CT-rich Low_complexity Low_complexity 1 293 0 1 631 521 246 6 0 chrX 6063003 6063174 -160587122 + (CA)n Simple_repeat Simple_repeat 1 172 0 1 631 254 341 39 45 chrX 6063702 6063880 -160586416 + MIRc SINE MIR 85 261 -7 1 631 262 340 96 0 chrX 6064430 6064524 -160585772 + RMER12 LTR ERVK 749 851 -471 1 631 180 0 0 0 chrX 6064698 6064718 -160585578 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 631 442 257 92 0 chrX 6065461 6065570 -160584726 - B1F SINE Alu -7 142 24 1 631 351 244 62 70 chrX 6065570 6065589 -160584707 - ID_B1 SINE B4 -7 217 91 1 631 439 324 21 7 chrX 6065766 6065906 -160584390 + B1F1 SINE Alu 1 142 -7 1 631 325 219 62 0 chrX 6065923 6065987 -160584309 + ID SINE ID 3 70 -154 1 631 235 230 23 0 chrX 6065996 6066083 -160584213 + CT-rich Low_complexity Low_complexity 2 90 0 1 631 486 0 0 0 chrX 6066083 6066137 -160584159 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 631 1097 66 48 0 chrX 6066312 6066478 -160583818 + L1_Mus3 LINE L1 6465 6638 0 1 631 213 357 17 25 chrX 6066592 6066710 -160583586 + MIRb SINE MIR 85 201 -67 1 631 236 203 45 45 chrX 6066788 6066855 -160583441 - B1_Mm SINE Alu -51 96 30 1 631 403 259 29 7 chrX 6066904 6067044 -160583252 - L1MA8 LINE L1 -31 6260 6118 1 631 405 228 141 97 chrX 6068500 6068685 -160581611 - MIRb SINE MIR -16 252 60 1 631 279 0 0 0 chrX 6068697 6068728 -160581568 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 631 342 252 35 0 chrX 6068803 6068918 -160581378 - L1ME2z LINE L1 0 6444 6326 1 631 2128 275 88 29 chrX 6068996 6069725 -160580571 - Lx9 LINE L1 -484 7160 6389 1 631 390 223 82 30 chrX 6070053 6070187 -160580109 - L1ME2z LINE L1 -279 6165 6025 1 631 329 292 0 22 chrX 6070196 6070295 -160580001 - B1_Mur1 SINE Alu -5 144 25 1 631 207 0 0 0 chrX 6070889 6070912 -160579384 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1 631 558 256 152 22 chrX 6070914 6071098 -160579198 - MER2 DNA MER2_type -13 332 125 1 631 704 249 58 6 chrX 6071402 6071576 -160578720 - MER5A DNA MER1_type -6 183 1 1 631 268 314 58 92 chrX 6072293 6072619 -160577677 - L3b LINE CR1 -125 357 43 1 631 212 194 0 0 chrX 6073139 6073175 -160577121 + T-rich Low_complexity Low_complexity 1 36 0 1 631 576 13 13 0 chrX 6074736 6074812 -160575484 - L1Md_T LINE L1 -2 6580 6504 1 631 193 315 205 9 chrX 6075181 6075293 -160575003 - L2b LINE L2 -214 3161 3028 1 631 315 0 0 0 chrX 6075335 6075370 -160574926 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 631 234 0 0 0 chrX 6075853 6075879 -160574417 + (CTA)n Simple_repeat Simple_repeat 1 26 0 1 631 216 0 0 0 chrX 6077100 6077124 -160573172 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 631 331 281 106 33 chrX 6077160 6077311 -160572985 + L1ME3 LINE L1 6000 6161 -1 1 631 540 292 70 0 chrX 6077846 6078017 -160572279 - B3A SINE B2 -15 183 1 1 631 518 297 15 18 chrX 6078180 6078454 -160571842 - L1M5 LINE L1 -606 5573 5301 1 631 227 299 178 18 chrX 6078574 6078799 -160571497 - L1M5 LINE L1 -891 5255 4995 1 631 336 24 0 0 chrX 6080052 6080093 -160570203 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 631 225 0 0 0 chrX 6080093 6080117 -160570179 + (GA)n Simple_repeat Simple_repeat 1 25 0 1 631 3033 65 2 15 chrX 6080396 6080801 -160569495 + MTB LTR MaLR 1 400 0 1 631 184 191 42 11 chrX 6080885 6080980 -160569316 + (TA)n Simple_repeat Simple_repeat 2 99 0 1 631 29515 107 20 9 chrX 6081055 6087370 -160562926 - L1_Mus1 LINE L1 -1 6566 176 1 631 608 270 99 22 chrX 6087368 6087641 -160562655 - L1M2 LINE L1 -562 5738 5445 1 631 668 282 47 0 chrX 6087670 6087819 -160562477 - RSINE1 SINE B4 -8 157 2 1 631 1656 180 20 103 chrX 6088647 6089055 -160561241 - ORR1D1 LTR MaLR 0 374 1 1 631 205 365 9 18 chrX 6089098 6089207 -160561089 - MIR3 SINE MIR -44 164 57 1 631 555 301 97 8 chrX 6089459 6089831 -160560465 - L1_Mur3 LINE L1 -2288 3592 3188 1 631 27 0 0 0 chrX 6089835 6089862 -160560434 + AT_rich Low_complexity Low_complexity 1 27 0 1 631 850 283 163 7 chrX 6089873 6090168 -160560128 + ORR1D2 LTR MaLR 5 345 -25 1 631 292 304 100 29 chrX 6090224 6090573 -160559723 - L1M2 LINE L1 -2964 3179 2806 1 631 2404 39 0 0 chrX 6090616 6090902 -160559394 - L1_Mus1 LINE L1 0 6567 6282 1 631 466 284 96 45 chrX 6090922 6091099 -160559197 + B3A SINE B2 1 186 -9 1 631 450 298 117 34 chrX 6091100 6091727 -160558569 - L1M2 LINE L1 -3396 2747 2086 1 631 355 318 63 34 chrX 6091820 6092025 -160558271 - L1MEg LINE L1 -4525 1559 1349 1 631 1594 284 118 31 chrX 6092428 6092842 -160557454 - Lx9 LINE L1 -248 7396 6940 1 631 459 0 0 0 chrX 6092842 6092893 -160557403 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 631 1594 284 118 31 chrX 6092893 6093224 -160557072 - Lx9 LINE L1 -705 6939 6587 1 631 447 19 0 0 chrX 6093859 6093911 -160556385 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 631 432 0 0 0 chrX 6093962 6094010 -160556286 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 631 259 301 41 0 chrX 6094611 6094684 -160555612 - PB1D10 SINE Alu -6 111 36 1 631 210 171 0 0 chrX 6094862 6094903 -160555393 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 631 542 28 0 0 chrX 6095940 6096011 -160554285 + L1Md_A LINE L1 6512 6582 0 1 631 204 40 0 0 chrX 6096027 6096052 -160554244 + (A)n Simple_repeat Simple_repeat 1 25 0 1 631 532 295 7 26 chrX 6096077 6096230 -160554066 - MIRb SINE MIR -88 180 31 1 631 7476 67 0 15 chrX 6096331 6097646 -160552650 - L1_Mus1 LINE L1 0 6567 5278 1 631 302 373 67 42 chrX 6098399 6098729 -160551567 + L2 LINE L2 1751 2088 -1331 1 631 227 254 15 60 chrX 6099388 6099455 -160550841 - ID2 SINE ID 0 83 20 1 631 184 260 0 39 chrX 6099597 6099649 -160550647 + MIRb SINE MIR 176 225 -43 1 631 294 186 286 0 chrX 6099652 6099722 -160550574 - 5S rRNA rRNA -31 90 1 1 631 489 34 0 0 chrX 6100565 6100624 -160549672 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 1 631 243 175 25 0 chrX 6100660 6100700 -160549596 - ID4_ SINE ID -27 56 16 1 631 565 289 101 28 chrX 6101031 6101319 -160548977 - Lx8 LINE L1 -1 7472 7164 1 631 21 57 0 0 chrX 6101511 6101546 -160548750 + AT_rich Low_complexity Low_complexity 1 35 0 1 631 484 194 88 9 chrX 6102437 6102584 -160547712 - LTR37A LTR ERV1 0 468 270 1 631 337 250 0 84 chrX 6102791 6102874 -160547422 + ID4 SINE ID 4 79 -4 1 631 309 210 81 0 chrX 6102888 6102950 -160547346 + ID4_ SINE ID 15 81 -2 1 631 192 77 0 0 chrX 6102952 6102978 -160547318 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 631 199 72 0 45 chrX 6103071 6103115 -160547181 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 2 631 532 264 0 104 chrX 6103131 6103275 -160547021 + ID_B1 SINE B4 94 222 -2 2 631 215 0 67 0 chrX 6103276 6103306 -160546990 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 2 631 473 206 87 0 chrX 6103670 6103762 -160546534 - PB1D10 SINE Alu -8 109 10 2 631 297 271 26 86 chrX 6103673 6103688 -160546608 - MT2B LTR ERVL -345 256 210 2 631 350 294 0 0 chrX 6103688 6103773 -160546523 - ID_B1 SINE B4 -60 164 80 2 631 297 271 26 86 chrX 6103773 6103790 -160546506 - MT2B LTR ERVL -345 209 147 2 631 335 253 81 0 chrX 6103887 6103974 -160546322 - MER105 DNA DNA -1 203 110 2 631 264 324 74 61 chrX 6104033 6104181 -160546115 + MER5A DNA MER1_type 40 189 0 2 631 2964 238 31 43 chrX 6104904 6105747 -160544549 - Lx8 LINE L1 -373 7100 6268 2 631 1486 244 58 35 chrX 6105926 6106447 -160543849 + Lx8 LINE L1 6936 7468 -5 2 631 306 262 0 0 chrX 6107408 6107469 -160542827 - U4 snRNA snRNA -78 67 7 2 631 22 0 0 0 chrX 6107812 6107834 -160542462 + AT_rich Low_complexity Low_complexity 1 22 0 2 631 261 316 122 46 chrX 6108024 6108406 -160541890 + L2c LINE L2 2756 3153 -234 2 631 903 162 0 57 chrX 6108852 6109009 -160541287 - B1_Mur4 SINE Alu -2 148 1 2 631 262 349 68 36 chrX 6109022 6109242 -160541054 - L2 LINE L2 -937 2482 2256 2 631 504 286 82 39 chrX 6109300 6109507 -160540789 - L2a LINE L2 -1 3425 3210 2 631 2737 156 73 4 chrX 6109534 6110056 -160540240 - Lx2 LINE L1 -503 6494 5937 2 631 2440 162 59 7 chrX 6110056 6110497 -160539799 + Lx2 LINE L1 6534 6997 0 2 631 356 0 23 0 chrX 6110566 6110610 -160539686 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 631 909 261 63 26 chrX 6110628 6110896 -160539400 - B4A SINE B4 -14 278 1 2 631 382 356 134 85 chrX 6111035 6111440 -160538856 - L2a LINE L2 -414 3005 2584 2 631 1226 61 0 0 chrX 6111440 6111587 -160538709 + B1_Mus2 SINE Alu 1 147 0 2 631 382 356 134 85 chrX 6111587 6112225 -160538071 - L2a LINE L2 -836 2583 1911 2 631 24 53 0 0 chrX 6112250 6112288 -160538008 + AT_rich Low_complexity Low_complexity 1 38 0 2 631 303 317 93 73 chrX 6112558 6112806 -160537490 - L2 LINE L2 -1185 2234 1982 2 631 254 257 28 14 chrX 6112836 6112907 -160537389 + ID4 SINE ID 3 74 -9 2 631 224 243 99 14 chrX 6112958 6113029 -160537267 - ID4_ SINE ID -3 80 4 2 631 240 218 242 0 chrX 6114590 6114669 -160535627 - Lx9 LINE L1 -1 7643 7542 2 631 291 28 0 0 chrX 6114669 6114705 -160535591 + (TCTG)n Simple_repeat Simple_repeat 2 37 0 2 631 240 218 242 0 chrX 6114705 6114749 -160535547 - Lx9 LINE L1 -103 7541 7491 2 631 321 333 0 40 chrX 6115697 6115797 -160534499 - PB1D10 SINE Alu -9 108 13 2 631 285 75 0 0 chrX 6116439 6116479 -160533817 + (CAGA)n Simple_repeat Simple_repeat 2 41 0 2 631 247 336 216 20 chrX 6116850 6117193 -160533103 + L2c LINE L2 2978 3387 0 2 631 336 281 49 18 chrX 6117263 6117426 -160532870 - L1MDa LINE L1 -1106 5431 5264 2 631 26 30 0 0 chrX 6117427 6117460 -160532836 + AT_rich Low_complexity Low_complexity 1 33 0 2 631 423 247 150 122 chrX 6117480 6117660 -160532636 - B3A SINE B2 -12 186 2 2 631 282 253 108 19 chrX 6117662 6117819 -160532477 - L1MDa LINE L1 -1261 5276 5106 2 631 671 246 102 40 chrX 6117831 6118183 -160532113 - L1MDa LINE L1 -1538 4999 4626 2 631 5110 74 29 1 chrX 6118386 6119072 -160531224 - L1_Mus3 LINE L1 -12 6626 5922 2 631 692 135 119 10 chrX 6119169 6119363 -160530933 - Lx9 LINE L1 0 7644 7430 2 631 275 301 63 6 chrX 6119619 6119793 -160530503 - L1MDa LINE L1 -2402 4135 3952 2 631 339 247 106 0 chrX 6119825 6119910 -160530386 - B1F SINE Alu -8 141 48 2 631 960 271 86 15 chrX 6120033 6120509 -160529787 - L1MDa LINE L1 -3138 3399 2890 2 631 21 36 0 0 chrX 6120712 6120740 -160529556 + AT_rich Low_complexity Low_complexity 1 28 0 2 631 183 42 0 0 chrX 6120787 6120811 -160529485 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 631 320 258 21 0 chrX 6121053 6121150 -160529146 - L1MDa LINE L1 -4597 2036 1938 2 631 1248 277 79 38 chrX 6121190 6121874 -160528422 - L1MDa LINE L1 -5034 1599 888 2 631 511 340 141 7 chrX 6122119 6122424 -160527872 - L1MDa LINE L1 -6150 483 138 2 631 225 212 30 0 chrX 6122525 6122591 -160527705 - L1MD LINE L1 -866 5280 5213 2 631 685 270 91 53 chrX 6122781 6123121 -160527175 + Lx6 LINE L1 7082 7434 -26 2 631 188 192 64 0 chrX 6123903 6123981 -160526315 + CT-rich Low_complexity Low_complexity 2 84 0 2 631 1448 143 63 0 chrX 6124016 6124254 -160526042 - MTC LTR MaLR -168 253 1 2 631 287 305 61 0 chrX 6124651 6124733 -160525563 - MIRb SINE MIR -136 132 46 2 631 431 91 0 38 chrX 6126323 6126403 -160523893 - L1Md_A LINE L1 0 6582 6506 2 631 2501 113 0 0 chrX 6126406 6126777 -160523519 - L1Md_F LINE L1 -5766 753 383 2 631 1507 153 15 8 chrX 6126777 6127041 -160523255 - L1VL1 LINE L1 -6156 266 1 2 631 5829 73 10 5 chrX 6127137 6127933 -160522363 - L1Md_F2 LINE L1 0 6582 5783 2 631 8039 30 0 0 chrX 6127933 6129063 -160521233 - L1Md_T LINE L1 0 6582 5453 2 631 23787 76 16 6 chrX 6129063 6132510 -160517786 - L1_Mm LINE L1 -83 5800 2320 2 631 297 0 0 0 chrX 6133099 6133132 -160517164 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 631 494 293 107 20 chrX 6133208 6133358 -160516938 + B3 SINE B2 1 163 -53 2 631 378 0 0 0 chrX 6133823 6133865 -160516431 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 631 269 350 138 8 chrX 6134313 6134516 -160515780 + MIRb SINE MIR 2 232 -30 2 631 218 308 19 0 chrX 6134723 6134775 -160515521 - MER5A DNA MER1_type -132 57 5 2 631 1087 288 94 10 chrX 6135064 6135373 -160514923 + MER2 DNA MER2_type 8 342 -3 2 631 1301 90 0 6 chrX 6135423 6135601 -160514695 - B2_Mm2 SINE B2 -18 177 1 2 631 24 53 0 0 chrX 6135607 6135645 -160514651 + AT_rich Low_complexity Low_complexity 1 38 0 2 631 408 20 0 0 chrX 6135727 6135776 -160514520 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 631 198 0 0 0 chrX 6135776 6135797 -160514499 + (GA)n Simple_repeat Simple_repeat 1 22 0 2 631 284 226 0 0 chrX 6136007 6136060 -160514236 - B1F SINE Alu -5 144 92 2 631 545 238 71 0 chrX 6136179 6136305 -160513991 + MER5A1 DNA MER1_type 1 135 -31 2 631 247 341 40 0 chrX 6136418 6136544 -160513752 + L1M5 LINE L1 5624 5754 -370 2 631 252 122 0 0 chrX 6136659 6136700 -160513596 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 631 254 339 97 18 chrX 6136755 6136869 -160513427 - MIR SINE MIR -109 153 31 2 631 859 0 0 0 chrX 6136899 6137000 -160513296 - B1_Mm SINE Alu -9 138 38 2 631 3321 191 88 17 chrX 6137010 6137788 -160512508 - RMER1A Other Other -2 1028 275 2 631 3926 74 6 0 chrX 6137788 6138300 -160511996 + L1_Mus1 LINE L1 6047 6561 -6 2 631 324 181 82 14 chrX 6138394 6138467 -160511829 - HAL1-3A_ME LINE L1 -806 2052 1975 2 631 216 182 0 0 chrX 6138468 6138512 -160511784 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 2 631 31 44 0 0 chrX 6139188 6139233 -160511063 + AT_rich Low_complexity Low_complexity 1 45 0 2 631 192 77 0 0 chrX 6139251 6139277 -160511019 + (TA)n Simple_repeat Simple_repeat 1 26 0 2 631 429 20 0 0 chrX 6139479 6139529 -160510767 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 631 1014 261 26 26 chrX 6139639 6140029 -160510267 - L1M2 LINE L1 -1212 4931 4542 2 631 777 276 90 63 chrX 6140043 6140808 -160509488 - L1M2 LINE L1 -1744 4399 3614 2 631 2809 75 2 0 chrX 6141077 6141491 -160508805 + MusHAL1 LINE L1 1755 2169 -543 2 631 3519 80 0 0 chrX 6141493 6141953 -160508343 + L1_Mus1 LINE L1 6099 6558 -9 2 631 186 43 0 0 chrX 6141958 6141981 -160508315 + (A)n Simple_repeat Simple_repeat 1 23 0 2 631 258 325 32 44 chrX 6142644 6142802 -160507494 - MER5A1 DNA MER1_type -7 159 4 2 631 36205 30 0 1 chrX 6143460 6150042 -160500254 - L1Md_T LINE L1 0 6585 1 2 631 456 200 121 7 chrX 6150046 6150132 -160500164 - L1M2 LINE L1 -691 5609 5523 2 631 279 0 0 0 chrX 6150132 6150163 -160500133 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 631 456 200 121 7 chrX 6150163 6150217 -160500079 - L1M2 LINE L1 -778 5522 5453 2 631 688 279 17 41 chrX 6150888 6151183 -160499113 + L1_Mur3 LINE L1 2689 2976 -2904 2 631 399 348 35 0 chrX 6151320 6151461 -160498835 + Lx8 LINE L1 7107 7252 -221 2 631 243 114 0 0 chrX 6151597 6151641 -160498655 + (CAGAGA)n Simple_repeat Simple_repeat 6 49 0 2 631 353 309 25 68 chrX 6155155 6155318 -160494978 - RSINE1 SINE B4 -6 159 4 2 631 445 301 70 25 chrX 6155341 6155542 -160494754 + MIR SINE MIR 53 262 0 2 631 321 290 17 90 chrX 6155563 6155741 -160494555 - MIRb SINE MIR -34 234 70 2 631 298 235 91 10 chrX 6156617 6156716 -160493580 - MIR SINE MIR -114 148 42 2 631 239 377 21 82 chrX 6157280 6157511 -160492785 + L2c LINE L2 3151 3386 -1 2 631 222 316 13 26 chrX 6157662 6157740 -160492556 - L2a LINE L2 -10 3416 3340 2 631 199 320 77 67 chrX 6158179 6158283 -160492013 + MIR3 SINE MIR 9 113 -95 2 631 411 227 0 0 chrX 6159807 6159882 -160490414 + MER5A DNA MER1_type 113 187 -2 2 632 23 0 0 0 chrX 6163164 6163187 -160487109 + AT_rich Low_complexity Low_complexity 1 23 0 2 632 237 143 36 0 chrX 6163187 6163243 -160487053 - Lx5 LINE L1 -11 7039 6982 2 632 389 265 8 25 chrX 6163357 6163477 -160486819 + Lx7 LINE L1 5619 5736 -1960 2 632 948 300 116 63 chrX 6163872 6164798 -160485498 - L1MD LINE L1 -1817 4329 3356 2 632 370 306 54 16 chrX 6164792 6164978 -160485318 + L1ME2z LINE L1 6234 6426 -18 2 632 360 266 79 9 chrX 6165076 6165190 -160485106 + MIR SINE MIR 115 236 -26 2 632 223 175 0 0 chrX 6165853 6165893 -160484403 - MIRb SINE MIR -170 98 59 2 632 188 193 66 66 chrX 6165923 6165984 -160484312 - L3 LINE CR1 -3591 898 838 2 632 285 211 25 66 chrX 6166067 6166189 -160484107 + (TATATG)n Simple_repeat Simple_repeat 3 119 0 2 632 302 257 109 45 chrX 6166949 6167059 -160483237 - PB1 SINE Alu -9 118 2 2 632 534 31 0 0 chrX 6168793 6168857 -160481439 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 632 369 0 0 0 chrX 6168857 6168897 -160481399 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 632 237 178 58 116 chrX 6169124 6169245 -160481051 - Lx9 LINE L1 -15 7629 7516 3 632 423 0 0 0 chrX 6169252 6169299 -160480997 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 632 441 196 29 0 chrX 6169302 6169404 -160480892 - Lx9 LINE L1 -178 7466 7362 3 632 531 221 8 8 chrX 6169452 6169580 -160480716 + Lx9 LINE L1 6765 6892 -752 3 632 8631 4 0 0 chrX 6169696 6170826 -160479470 - L1Md_A LINE L1 0 6582 5454 3 632 608 284 28 33 chrX 6171975 6172157 -160478139 - MER5A DNA MER1_type -7 182 2 3 632 223 295 33 0 chrX 6172162 6172223 -160478073 - MIRc SINE MIR -130 138 76 3 632 357 227 97 26 chrX 6172815 6172969 -160477327 + L1MA6 LINE L1 6066 6230 -70 3 632 629 326 98 85 chrX 6173468 6174032 -160476264 - L1ME4a LINE L1 -189 5935 5365 3 632 785 319 68 32 chrX 6174507 6175070 -160475226 - L1MB7 LINE L1 -45 6139 5557 3 632 445 252 50 43 chrX 6175202 6175343 -160474953 + MER5A DNA MER1_type 2 143 -46 3 632 482 288 19 0 chrX 6175498 6175658 -160474638 + L1MA4 LINE L1 5567 5729 -562 3 632 3733 38 4 0 chrX 6175683 6176157 -160474139 + L1_Mus1 LINE L1 5588 6063 -504 3 632 219 69 0 0 chrX 6176212 6176241 -160474055 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 632 334 254 65 8 chrX 6176267 6176390 -160473906 + L1MA4 LINE L1 5795 5924 -376 3 632 294 167 0 0 chrX 6176397 6176457 -160473839 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 632 290 316 188 13 chrX 6177388 6177542 -160472754 - MIR SINE MIR -1 261 81 3 632 6430 49 2 2 chrX 6177845 6178639 -160471657 + L1Md_F2 LINE L1 5789 6582 0 3 632 1733 281 34 5 chrX 6182032 6182584 -160467712 - Lx9 LINE L1 -736 6908 6341 3 632 420 20 0 0 chrX 6182584 6182633 -160467663 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 632 729 92 0 0 chrX 6182633 6182752 -160467544 + (GA)n Simple_repeat Simple_repeat 2 121 0 3 632 5031 233 52 36 chrX 6182752 6184529 -160465767 - Lx9 LINE L1 -1275 6198 4359 3 632 792 170 12 93 chrX 6185066 6185228 -160465068 - B1_Mur3 SINE Alu 0 149 1 3 632 338 314 57 38 chrX 6185147 6185253 -160465043 - B4 SINE B4 -125 167 60 3 632 193 331 65 72 chrX 6185520 6185673 -160464623 + MER5B DNA MER1_type 27 178 0 3 632 1890 173 74 5 chrX 6186370 6186737 -160463559 + ORR1B1 LTR MaLR 3 394 0 3 632 227 414 89 19 chrX 6187182 6187396 -160462900 - L2b LINE L2 -24 3351 3123 3 632 1749 167 67 3 chrX 6187781 6188112 -160462184 - ORR1B2 LTR MaLR -15 352 1 3 632 309 269 47 100 chrX 6188255 6188544 -160461752 - L1M5 LINE L1 -2072 5810 5540 3 632 243 88 0 0 chrX 6188558 6188592 -160461704 + (T)n Simple_repeat Simple_repeat 1 34 0 3 632 763 105 35 0 chrX 6188598 6188712 -160461584 - ORR1A4 LTR MaLR -68 261 144 3 632 35889 50 1 1 chrX 6188722 6194670 -160455626 - L1Md_F3 LINE L1 -14 6570 622 3 632 4282 102 58 6 chrX 6194901 6195541 -160454755 - Lx4A LINE L1 0 7058 6386 3 632 27 29 0 0 chrX 6195631 6195665 -160454631 + AT_rich Low_complexity Low_complexity 1 34 0 3 632 351 259 59 47 chrX 6195999 6196084 -160454212 - B1F1 SINE Alu -61 88 3 3 632 432 324 60 16 chrX 6196233 6196603 -160453693 - L1M5 LINE L1 -1487 4659 4274 3 632 874 104 146 0 chrX 6197056 6197200 -160453096 - B2_Mm2 SINE B2 -30 165 1 3 632 306 402 0 0 chrX 6197514 6197626 -160452670 + PB1D10 SINE Alu 3 114 -3 3 632 195 235 0 0 chrX 6197635 6197686 -160452610 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 632 267 54 0 0 chrX 6197724 6197761 -160452535 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 632 746 199 56 21 chrX 6198637 6198781 -160451515 - B1_Mur2 SINE Alu 0 149 1 3 632 211 211 0 0 chrX 6198858 6198896 -160451400 + (TATG)n Simple_repeat Simple_repeat 3 40 0 3 632 26 30 0 0 chrX 6198896 6198929 -160451367 + AT_rich Low_complexity Low_complexity 1 33 0 3 632 507 60 0 0 chrX 6199287 6199354 -160450942 + (TCCA)n Simple_repeat Simple_repeat 4 70 0 3 632 934 213 104 5 chrX 6199369 6199591 -160450705 - Lx6 LINE L1 -177 7283 7040 3 632 349 116 11 23 chrX 6199727 6199815 -160450481 + T-rich Low_complexity Low_complexity 2 88 0 3 632 486 335 32 11 chrX 6200193 6200383 -160449913 + MIR SINE MIR 29 222 -40 3 632 909 166 119 15 chrX 6200390 6200592 -160449704 + URR1A DNA MER1_type 4 226 0 3 632 264 122 0 0 chrX 6201180 6201221 -160449075 + (CAA)n Simple_repeat Simple_repeat 1 41 0 3 632 207 220 0 0 chrX 6201228 6201278 -160449018 + GA-rich Low_complexity Low_complexity 2 51 0 3 632 379 292 143 37 chrX 6201558 6201775 -160448521 + MIRb SINE MIR 16 255 -13 3 632 197 232 16 82 chrX 6202576 6202637 -160447659 + L2a LINE L2 3355 3411 -15 3 632 572 282 121 21 chrX 6202659 6202898 -160447398 - MIRb SINE MIR -3 265 3 3 632 392 362 91 31 chrX 6203319 6203573 -160446723 + MER47B DNA MER2_type 37 305 -113 3 632 293 270 148 35 chrX 6203582 6203724 -160446572 - MIR SINE MIR -69 193 36 3 632 246 283 153 40 chrX 6204423 6204651 -160445645 + MIR SINE MIR 8 261 -1 3 632 1193 48 7 0 chrX 6205863 6206010 -160444286 - B1_Mus1 SINE Alu 0 148 1 3 632 221 150 0 0 chrX 6206587 6206627 -160443669 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 632 507 17 0 0 chrX 6206656 6206716 -160443580 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 632 346 62 30 30 chrX 6206718 6206784 -160443512 + (CAGAGA)n Simple_repeat Simple_repeat 2 67 0 3 632 315 49 0 0 chrX 6206811 6206852 -160443444 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 632 471 126 0 0 chrX 6206852 6206947 -160443349 + (GA)n Simple_repeat Simple_repeat 2 96 0 3 632 225 0 0 0 chrX 6206975 6207000 -160443296 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 632 600 115 0 0 chrX 6207000 6207113 -160443183 + (GA)n Simple_repeat Simple_repeat 2 114 0 3 632 351 0 0 0 chrX 6207141 6207180 -160443116 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 632 216 111 0 0 chrX 6207204 6207240 -160443056 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 632 241 339 0 0 chrX 6207240 6207299 -160442997 - tRNA-Ala-GCY_ tRNA tRNA -9 66 8 3 632 226 391 0 0 chrX 6207242 6207311 -160442985 - BC1_Mm scRNA scRNA -82 70 2 3 632 268 293 27 0 chrX 6207335 6207410 -160442886 - ID4_ SINE ID -4 79 3 3 632 249 315 27 0 chrX 6207452 6207525 -160442771 - ID2 SINE ID -7 76 2 3 632 274 233 0 16 chrX 6209128 6209189 -160441107 + CT-rich Low_complexity Low_complexity 1 60 0 3 632 274 282 90 0 chrX 6209204 6209282 -160441014 - ID_B1 SINE B4 -54 170 86 3 632 347 357 101 23 chrX 6209696 6209915 -160440381 + MIR SINE MIR 29 260 -8 3 632 219 170 0 0 chrX 6209954 6210001 -160440295 + (CAG)n Simple_repeat Simple_repeat 2 48 0 3 632 453 138 0 0 chrX 6210139 6210219 -160440077 + (CA)n Simple_repeat Simple_repeat 1 80 0 3 632 263 309 0 58 chrX 6212081 6212167 -160438129 - Tigger7 DNA MER2_type -6 2485 2405 3 632 958 295 50 0 chrX 6212164 6212422 -160437874 - Tigger7 DNA MER2_type -2212 279 9 3 632 305 276 0 0 chrX 6212997 6213073 -160437223 + (CTGTG)n Simple_repeat Simple_repeat 2 77 0 3 632 283 296 42 0 chrX 6213407 6213478 -160436818 - ID4 SINE ID -7 76 3 3 632 465 19 0 0 chrX 6213687 6213741 -160436555 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 632 461 292 111 48 chrX 6215000 6215315 -160434981 - MLT1A1 LTR MaLR -12 396 19 3 632 392 231 45 11 chrX 6215358 6215508 -160434788 + L1MA5 LINE L1 6142 6300 0 3 632 626 284 125 15 chrX 6215526 6215981 -160434315 + L1MB7 LINE L1 4371 4875 -1271 3 632 842 271 142 19 chrX 6215991 6216251 -160434045 + B4A SINE B4 1 292 0 3 632 347 316 5 28 chrX 6216375 6216502 -160433794 - MLT1A0 LTR MaLR 0 374 239 3 632 1189 20 0 26 chrX 6216656 6216810 -160433486 + L1Md_F2 LINE L1 6422 6571 -11 3 632 459 306 134 65 chrX 6216820 6217051 -160433245 - MLT1A0 LTR MaLR -116 249 3 3 632 1160 280 18 27 chrX 6217093 6217541 -160432755 + L1MB7 LINE L1 5412 5855 -329 3 632 1102 179 33 47 chrX 6217557 6217832 -160432464 - Lx5 LINE L1 0 7050 6780 3 632 408 308 20 14 chrX 6217845 6217993 -160432303 + L1MB7 LINE L1 5867 6015 -169 3 632 22 0 0 0 chrX 6218219 6218241 -160432055 + AT_rich Low_complexity Low_complexity 1 22 0 3 632 22 35 0 0 chrX 6218720 6218749 -160431547 + AT_rich Low_complexity Low_complexity 1 29 0 3 632 208 200 22 0 chrX 6218922 6218967 -160431329 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 632 441 266 8 8 chrX 6219100 6219229 -160431067 - L1_Mur3 LINE L1 -601 5711 5583 3 632 313 98 0 0 chrX 6219440 6219491 -160430805 - Lx3A LINE L1 -3 6978 6928 3 632 983 186 43 8 chrX 6220507 6220739 -160429557 - L1_Mur3 LINE L1 -1519 4624 4377 3 632 368 199 107 47 chrX 6220722 6220891 -160429405 - Lx9 LINE L1 0 7644 7466 3 632 2342 224 96 39 chrX 6220934 6221757 -160428539 - L1_Mur3 LINE L1 -1519 4361 3492 3 632 1149 248 93 77 chrX 6221761 6222189 -160428107 - RLTR18 LTR ERVK 0 616 182 3 632 1229 247 63 42 chrX 6222197 6222982 -160427314 - L1_Mur3 LINE L1 -4200 1680 868 3 632 243 322 13 45 chrX 6223107 6223263 -160427033 - L1_Mur3 LINE L1 -6831 897 747 3 632 186 47 44 44 chrX 6223338 6223383 -160426913 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 3 632 516 43 344 0 chrX 6223384 6223477 -160426819 - BC1_Mm scRNA scRNA -27 125 1 3 632 22 0 0 0 chrX 6223884 6223906 -160426390 + AT_rich Low_complexity Low_complexity 1 22 0 3 632 653 252 14 44 chrX 6223993 6224192 -160426104 + RLTR18 LTR ERVK 1 200 -312 3 632 765 297 75 32 chrX 6224294 6224665 -160425631 + RLTR18 LTR ERVK 119 616 0 3 632 6587 60 3 2 chrX 6224960 6225837 -160424459 - L1_Mus1 LINE L1 0 6567 5690 3 632 456 322 26 26 chrX 6225917 6226070 -160424226 - MLT1F2 LTR MaLR -396 164 12 3 632 437 257 44 0 chrX 6226236 6226349 -160423947 - PB1D9 SINE Alu -2 118 1 3 632 348 242 62 21 chrX 6226411 6226508 -160423788 + MMAR1 DNA Mariner 3 103 -1183 3 632 189 94 0 0 chrX 6226509 6226541 -160423755 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 3 632 845 136 34 60 chrX 6226545 6226694 -160423602 - B1_Mur4 SINE Alu -4 146 2 3 632 1345 247 79 22 chrX 6226755 6227647 -160422649 - Lx6 LINE L1 -30 7430 6207 4 632 574 221 0 14 chrX 6227650 6227788 -160422508 + MMAR1 DNA Mariner 89 224 -1062 3 632 2673 173 7 13 chrX 6227812 6228263 -160422033 - Lx4B LINE L1 -7 7051 6604 4 632 3385 175 35 10 chrX 6228270 6229785 -160420511 + Lx2B LINE L1 5305 6972 -4 4 632 369 0 0 0 chrX 6229842 6229883 -160420413 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 632 2139 228 99 8 chrX 6229883 6230379 -160419917 + MMAR1 DNA Mariner 744 1284 -2 3 632 317 263 111 55 chrX 6230535 6230716 -160419580 + B3A SINE B2 1 191 -7 4 632 357 269 190 7 chrX 6231094 6231236 -160419060 + MER5A DNA MER1_type 13 180 -9 4 632 221 131 21 21 chrX 6231247 6231294 -160419002 + (TTA)n Simple_repeat Simple_repeat 3 49 0 4 632 200 370 76 62 chrX 6231730 6231940 -160418356 + L2 LINE L2 315 527 -2892 4 632 386 191 28 28 chrX 6232004 6232112 -160418184 - Lx2B LINE L1 -5 6995 6888 4 632 21 36 0 0 chrX 6232390 6232418 -160417878 + AT_rich Low_complexity Low_complexity 1 28 0 4 632 210 238 0 16 chrX 6233030 6233094 -160417202 + CT-rich Low_complexity Low_complexity 1 63 0 4 632 441 0 0 0 chrX 6233101 6233150 -160417146 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 632 289 312 51 64 chrX 6233150 6233275 -160417021 - B1F2 SINE Alu -8 140 19 4 632 483 287 0 0 chrX 6233562 6233677 -160416619 - PB1D7 SINE Alu -1 119 5 4 632 238 249 192 0 chrX 6234179 6234356 -160415940 + L1MDa LINE L1 1868 2078 -4555 4 632 1442 190 16 8 chrX 6234785 6235376 -160414920 + L1_Mur3 LINE L1 892 1425 -4452 4 632 8660 154 76 77 chrX 6235367 6235941 -160414355 + L1_Mur3 LINE L1 2770 3385 -2492 4 632 271 286 25 110 chrX 6235941 6236059 -160414237 + MT2B LTR ERVL 157 264 -337 4 632 675 157 0 57 chrX 6235972 6236094 -160414202 + B1_Mus1 SINE Alu 34 148 0 4 632 8660 154 76 77 chrX 6236094 6237541 -160412755 + L1_Mur3 LINE L1 3386 4940 -937 4 632 355 270 101 35 chrX 6237545 6237714 -160412582 + L1MC3 LINE L1 7583 7762 -23 4 632 781 301 107 19 chrX 6237818 6238359 -160411937 + L1ME1 LINE L1 5484 6072 -107 4 632 23 0 0 0 chrX 6238410 6238433 -160411863 + AT_rich Low_complexity Low_complexity 1 23 0 4 632 1340 265 83 6 chrX 6238502 6238840 -160411456 - MTE2a LTR MaLR -15 364 1 4 632 2043 191 90 53 chrX 6238895 6239386 -160410910 - MT2A LTR ERVL -24 509 1 4 632 1217 269 85 31 chrX 6239386 6239735 -160410561 - MTE-int LTR MaLR -42 1538 1169 4 632 2159 144 67 54 chrX 6239735 6239850 -160410446 - ORR1B1 LTR MaLR 0 394 291 4 632 2295 68 10 0 chrX 6239850 6240157 -160410139 - L1_Mus3 LINE L1 -7 6631 6322 4 632 2159 144 67 54 chrX 6240157 6240430 -160409866 - ORR1B1 LTR MaLR -104 290 1 4 632 857 322 121 0 chrX 6240430 6240719 -160409577 - MTE-int LTR MaLR -407 1173 850 4 632 26 74 0 0 chrX 6243235 6243289 -160407007 + AT_rich Low_complexity Low_complexity 1 54 0 4 632 324 309 25 0 chrX 6243564 6243645 -160406651 - ID4_ SINE ID 0 83 1 4 632 288 0 0 0 chrX 6243748 6243780 -160406516 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 632 255 274 36 29 chrX 6244055 6244194 -160406102 - L1MD1 LINE L1 -253 5989 5850 4 632 564 274 32 44 chrX 6244300 6244552 -160405744 - L1MDb LINE L1 -5348 1061 813 4 632 454 359 16 32 chrX 6244837 6245027 -160405269 - MIRb SINE MIR -23 245 59 4 632 279 0 0 0 chrX 6245065 6245096 -160405200 + (A)n Simple_repeat Simple_repeat 1 31 0 4 632 219 323 20 101 chrX 6245445 6245574 -160404722 + L2c LINE L2 3289 3425 -1 4 632 372 282 91 67 chrX 6245599 6245884 -160404412 - MER113A DNA MER1_type 0 314 23 4 632 423 0 0 0 chrX 6246288 6246335 -160403961 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 632 201 315 176 26 chrX 6246335 6246488 -160403808 - MER5B DNA MER1_type -1 177 2 4 632 34 42 0 0 chrX 6247092 6247140 -160403156 + AT_rich Low_complexity Low_complexity 1 48 0 4 632 291 293 97 52 chrX 6247244 6247411 -160402885 - MIRb SINE MIR -65 197 15 4 632 218 358 0 12 chrX 6247431 6247513 -160402783 - MIR3 SINE MIR -23 185 105 4 632 194 196 85 21 chrX 6247549 6247596 -160402700 - L2a LINE L2 -4 3371 3322 4 632 9147 50 10 4 chrX 6247628 6248942 -160401354 - L1Md_F2 LINE L1 -1 6581 5261 4 632 4211 56 41 2 chrX 6248942 6249481 -160400815 - LTRIS2 LTR ERV1 0 564 5 4 632 9147 61 2 9 chrX 6249481 6250132 -160400164 - L1Md_F2 LINE L1 -623 5260 4614 4 632 234 327 90 12 chrX 6250141 6250308 -160399988 - L2a LINE L2 -105 3321 3142 4 632 459 374 127 33 chrX 6250440 6250957 -160399339 - L2a LINE L2 -304 3122 2556 4 632 646 133 14 56 chrX 6251350 6251493 -160398803 - L1Md_F2 LINE L1 0 6582 6446 4 632 524 190 230 12 chrX 6252790 6252955 -160397341 - RMER15 LTR ERVL -347 228 28 4 632 296 222 0 45 chrX 6252999 6253065 -160397231 - RMER15 LTR ERVL -511 64 2 4 632 212 59 29 0 chrX 6253141 6253175 -160397121 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 4 632 564 282 138 32 chrX 6253199 6253547 -160396749 - Lx9 LINE L1 -188 7456 7072 4 632 490 299 106 17 chrX 6253570 6253805 -160396491 - Lx8 LINE L1 -1020 6453 6198 4 632 392 251 0 0 chrX 6253958 6254083 -160396213 + L1MB8 LINE L1 5804 5930 -310 4 632 194 307 72 80 chrX 6255685 6255823 -160394473 + L2 LINE L2 2578 2714 -705 4 632 478 48 0 0 chrX 6255923 6255985 -160394311 - Lx2 LINE L1 -225 6772 6711 4 632 1407 75 9 27 chrX 6255985 6256205 -160394091 + L1_Mus3 LINE L1 6422 6637 -1 4 632 466 261 90 0 chrX 6256239 6256365 -160393931 + MLT1A0 LTR MaLR 1 147 -227 4 632 937 281 123 98 chrX 6256518 6256751 -160393545 + RLTR18 LTR ERVK 7 263 -353 4 632 1065 103 0 7 chrX 6256751 6256898 -160393398 - B1_Mus1 SINE Alu -1 147 2 4 632 937 281 123 98 chrX 6256898 6257259 -160393037 + RLTR18 LTR ERVK 264 616 0 4 632 254 290 71 71 chrX 6257325 6257592 -160392704 - L1MCa LINE L1 -1422 5142 4876 4 632 269 347 0 0 chrX 6257606 6257681 -160392615 - ID4_ SINE ID -7 76 2 4 632 2820 30 3 32 chrX 6257805 6258178 -160392118 + L1Md_F2 LINE L1 5225 5586 -297 4 632 8162 42 1 0 chrX 6258178 6259159 -160391137 + L1Md_F2 LINE L1 5587 6568 -14 4 632 5417 109 49 13 chrX 6259259 6260111 -160390185 + Lx3B LINE L1 6088 6970 -3 4 632 483 297 37 19 chrX 6260143 6260304 -160389992 - Tigger5 DNA MER2_type -2172 234 71 4 632 2551 118 16 3 chrX 6260306 6260687 -160389609 + ORR1B1 LTR MaLR 1 386 -8 4 632 1435 240 132 13 chrX 6260762 6261464 -160388832 - L1MCa LINE L1 -3239 3325 2540 4 632 1524 307 75 45 chrX 6261554 6262588 -160387708 - Lx8 LINE L1 0 7473 6410 4 632 234 0 0 0 chrX 6262598 6262624 -160387672 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 632 271 338 0 0 chrX 6262624 6262692 -160387604 - B1F SINE Alu -16 133 66 4 632 233 315 76 0 chrX 6262664 6262756 -160387540 - ID_B1 SINE B4 -22 202 104 4 632 855 281 156 74 chrX 6262788 6263365 -160386931 - L1MCa LINE L1 -4299 2452 1843 4 632 273 57 0 0 chrX 6263365 6263400 -160386896 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 632 855 284 142 58 chrX 6263400 6264316 -160385980 - L1MCa LINE L1 -4909 1842 745 4 632 1043 44 0 0 chrX 6264332 6264467 -160385829 - L1_Mus1 LINE L1 0 6567 6433 4 632 372 198 129 0 chrX 6264476 6264577 -160385719 - MER2 DNA MER2_type -151 194 81 4 632 320 352 43 27 chrX 6264649 6264836 -160385460 - L1MCa LINE L1 -5253 792 603 4 632 297 366 58 11 chrX 6264963 6265137 -160385159 - B3A SINE B2 -16 182 1 4 632 309 172 161 0 chrX 6265330 6265423 -160384873 - L1M4b LINE L1 -4226 3108 3001 4 632 451 265 158 45 chrX 6265487 6265752 -160384544 - L1M4b LINE L1 -4440 2894 2600 4 632 361 296 95 0 chrX 6265795 6265974 -160384322 - L1M4b LINE L1 -4866 2468 2273 4 632 234 0 0 0 chrX 6265987 6266013 -160384283 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 632 1101 63 0 14 chrX 6266013 6266150 -160384146 - B1_Mus2 SINE Alu -10 137 1 4 632 333 0 0 0 chrX 6266336 6266373 -160383923 + (TC)n Simple_repeat Simple_repeat 2 38 0 4 632 396 0 0 0 chrX 6266373 6266416 -160383880 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 632 1398 259 72 70 chrX 6266435 6267050 -160383246 - Lx9 LINE L1 -206 7438 6823 4 632 344 180 79 0 chrX 6267246 6267335 -160382961 + Lx3C LINE L1 6880 6975 -1 4 632 2544 228 56 43 chrX 6267359 6268253 -160382043 + Lx9 LINE L1 5016 5960 -1684 4 632 327 317 78 104 chrX 6268293 6268677 -160381619 - L1M4b LINE L1 -5941 1393 1020 4 632 351 0 0 0 chrX 6268858 6268897 -160381399 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 632 754 161 13 0 chrX 6269768 6269923 -160380373 + CT-rich Low_complexity Low_complexity 2 158 0 4 632 1505 209 79 9 chrX 6269962 6270280 -160380016 - RMER5 LTR ERV1 -182 352 13 4 632 678 308 115 19 chrX 6270291 6270612 -160379684 + MLT-int LTR MaLR 186 537 -1198 4 632 1444 220 9 14 chrX 6270613 6270963 -160379333 - L1_Rod LINE L1 -1680 4167 3820 4 632 423 92 0 0 chrX 6270963 6271028 -160379268 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 632 1363 251 72 22 chrX 6271028 6271225 -160379071 - L1M2 LINE L1 -2322 3821 3625 4 632 221 250 100 22 chrX 6271228 6271318 -160378978 + L2a LINE L2 3326 3422 -4 4 632 918 58 0 0 chrX 6271690 6271811 -160378485 + (GAAA)n Simple_repeat Simple_repeat 2 122 0 4 632 35 41 0 0 chrX 6272181 6272230 -160378066 + AT_rich Low_complexity Low_complexity 1 49 0 4 632 14047 108 7 12 chrX 6272814 6275203 -160375093 - L1_Mur1 LINE L1 -266 5620 3316 4 632 2232 61 14 3 chrX 6275203 6275498 -160374798 + L1_Mus3 LINE L1 6331 6628 -10 4 632 6589 264 24 70 chrX 6275498 6275800 -160374496 - L1_Mur1 LINE L1 -2532 3315 3029 4 632 519 60 0 0 chrX 6275800 6275867 -160374429 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 4 632 6589 264 24 70 chrX 6275867 6276449 -160373847 - L1_Mur1 LINE L1 -2819 3028 2453 4 632 2288 20 21 1 chrX 6276472 6276769 -160373527 + L1Md_F2 LINE L1 5719 6009 -573 4 632 2978 19 0 0 chrX 6276766 6277125 -160373171 + L1Md_F2 LINE L1 5227 5585 -298 4 632 7739 62 2 7 chrX 6277126 6278127 -160372169 + L1Md_F2 LINE L1 5587 6582 0 4 632 405 0 0 0 chrX 6278684 6278729 -160371567 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 632 25 31 0 0 chrX 6279129 6279161 -160371135 + AT_rich Low_complexity Low_complexity 1 32 0 4 632 363 329 87 111 chrX 6279202 6279616 -160370680 - MLT1A1 LTR MaLR 0 408 5 4 632 229 20 100 0 chrX 6279635 6279685 -160370611 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 632 1816 227 57 30 chrX 6279748 6280159 -160370137 + Lx9 LINE L1 5303 5707 -140 4 632 186 43 0 0 chrX 6280159 6280182 -160370114 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 4 632 1816 227 57 30 chrX 6280182 6280301 -160369995 + Lx9 LINE L1 5708 5847 0 4 632 2343 80 16 0 chrX 6280494 6280808 -160369488 - ORR1A2 LTR MaLR -8 319 1 4 632 202 154 26 0 chrX 6280854 6280893 -160369403 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 632 2034 282 51 52 chrX 6280904 6281507 -160368789 + Lx9 LINE L1 6367 6999 -645 4 632 1389 61 0 0 chrX 6281507 6281687 -160368609 + (TTC)n Simple_repeat Simple_repeat 1 180 0 5 632 692 54 0 11 chrX 6281691 6281785 -160368511 + (TTCTCC)n Simple_repeat Simple_repeat 5 97 0 5 632 2034 282 51 52 chrX 6281785 6281987 -160368309 + Lx9 LINE L1 7000 7176 -468 4 632 1045 129 12 12 chrX 6282008 6282173 -160368123 + B2_Mm1t SINE B2 1 165 -28 5 632 25 51 0 0 chrX 6282243 6282282 -160368014 + AT_rich Low_complexity Low_complexity 1 39 0 5 632 692 191 69 0 chrX 6282303 6282434 -160367862 + B1_Mm SINE Alu 7 146 -1 5 632 310 296 198 17 chrX 6282582 6282754 -160367542 - MamRep1161 DNA TcMar -754 203 1 5 632 712 308 24 5 chrX 6283269 6283478 -160366818 - B3 SINE B2 -3 213 1 5 632 6018 88 17 3 chrX 6284042 6285682 -160364614 + L1VL2 LINE L1 165 1826 -1789 5 632 322 279 0 41 chrX 6285820 6285917 -160364379 - PB1D10 SINE Alu 0 117 25 5 632 208 394 13 47 chrX 6286716 6286865 -160363431 + L2a LINE L2 3266 3409 -17 5 632 477 302 0 15 chrX 6287071 6287202 -160363094 + L2a LINE L2 3298 3426 0 5 632 1936 247 23 27 chrX 6287488 6288004 -160362292 - Lx6 LINE L1 0 7460 6947 5 632 319 221 137 0 chrX 6288008 6288043 -160362253 - L1MA9 LINE L1 -39 6273 6239 5 632 213 94 0 0 chrX 6288043 6288075 -160362221 + (CATA)n Simple_repeat Simple_repeat 2 33 0 5 632 319 221 137 0 chrX 6288075 6288134 -160362162 - L1MA9 LINE L1 -74 6238 6167 5 632 372 43 0 0 chrX 6288571 6288617 -160361679 + (TCC)n Simple_repeat Simple_repeat 3 48 0 5 632 799 110 0 0 chrX 6288619 6288728 -160361568 - B1_Mus1 SINE Alu -37 111 3 5 632 423 190 0 123 chrX 6288628 6288742 -160361554 - MT2B LTR ERVL -345 256 157 5 632 2565 186 27 19 chrX 6288773 6289669 -160360627 + L1_Mur3 LINE L1 894 1795 -4082 5 632 1025 72 6 32 chrX 6289661 6289818 -160360478 - L1Md_F2 LINE L1 -212 6370 6218 5 9 32682 93 15 13 chrX 6289814 6295382 -160354914 - L1Md_F2 LINE L1 -93 5790 211 5 633 4482 174 178 31 chrX 6295382 6296658 -160353638 + L1_Mur3 LINE L1 2643 4106 -1771 5 633 732 260 95 122 chrX 6296658 6297026 -160353270 + RMER2 LTR ERV1 183 540 -27 5 633 6366 148 32 15 chrX 6297045 6298235 -160352061 + L1_Mur3 LINE L1 4198 5407 -470 5 633 220 284 0 64 chrX 6298235 6298344 -160351952 + GA-rich Low_complexity Low_complexity 5 106 0 5 633 6801 35 1 0 chrX 6299046 6299855 -160350441 + L1Md_T LINE L1 5772 6581 -1 5 633 1118 303 110 23 chrX 6300831 6301304 -160348992 + Lx5 LINE L1 6488 7001 -49 5 633 249 232 36 12 chrX 6301668 6301751 -160348545 + (CATATA)n Simple_repeat Simple_repeat 5 89 0 5 633 708 302 168 31 chrX 6302639 6303002 -160347294 + MTD LTR MaLR 7 419 0 5 633 711 212 0 64 chrX 6303167 6303338 -160346958 + RMER15 LTR ERVL 45 204 -371 5 633 940 150 121 6 chrX 6303350 6303524 -160346772 - URR1A DNA MER1_type 0 226 33 5 633 1466 223 93 35 chrX 6303532 6303876 -160346420 + RMER15 LTR ERVL 210 573 -2 5 633 267 327 139 7 chrX 6304066 6304217 -160346079 + MIR SINE MIR 48 218 -44 5 633 1588 285 6 32 chrX 6304217 6304713 -160345583 + Lx9 LINE L1 6864 7346 -298 5 633 2807 140 114 19 chrX 6304727 6305357 -160344939 - RLTR13D1 LTR ERVK 0 1023 252 5 633 461 85 0 79 chrX 6305357 6305446 -160344850 + L1Md_F2 LINE L1 6500 6581 -1 5 633 2053 244 99 93 chrX 6305446 6305698 -160344598 - RLTR13D1 LTR ERVK -695 328 1 5 633 369 0 0 0 chrX 6305755 6305796 -160344500 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 633 373 317 35 0 chrX 6306256 6306398 -160343898 + MIR SINE MIR 43 189 -73 5 633 216 0 0 0 chrX 6307227 6307251 -160343045 + (TTTC)n Simple_repeat Simple_repeat 1 24 0 5 633 2788 175 37 70 chrX 6307260 6307849 -160342447 - RMER15 LTR ERVL 0 575 6 5 633 190 308 109 95 chrX 6308210 6308357 -160341939 - MIRb SINE MIR -18 250 102 5 633 427 298 0 27 chrX 6308477 6308632 -160341664 - MIR SINE MIR -71 191 48 5 633 1505 145 14 81 chrX 6309959 6310304 -160339992 - RLTRETN_Mm LTR ERVK 0 322 1 5 633 260 344 137 53 chrX 6312087 6312372 -160337924 - L2c LINE L2 -7 3380 3072 5 633 1077 262 21 90 chrX 6312384 6312849 -160337447 - L1_Rod LINE L1 -6417 755 323 5 633 435 199 108 0 chrX 6312950 6313116 -160337180 - L1MDa LINE L1 -4353 2280 2097 5 633 234 136 0 0 chrX 6313151 6313195 -160337101 + (T)n Simple_repeat Simple_repeat 1 44 0 5 633 304 297 132 46 chrX 6313204 6313356 -160336940 - RMER15 LTR ERVL -4 571 407 5 633 705 330 57 20 chrX 6313714 6313827 -160336469 - MLT1B LTR MaLR -77 313 186 5 633 618 39 0 0 chrX 6313827 6313904 -160336392 + (TC)n Simple_repeat Simple_repeat 1 77 0 5 633 238 385 0 35 chrX 6313905 6314018 -160336278 - PB1D10 SINE Alu -8 109 1 5 633 705 330 57 20 chrX 6314018 6314202 -160336094 - MLT1B LTR MaLR -205 185 3 5 633 274 304 8 17 chrX 6314267 6314384 -160335912 - L1MDa LINE L1 -5039 1594 1479 5 633 688 309 114 7 chrX 6314409 6314831 -160335465 - L1MDa LINE L1 -6149 484 18 5 633 1117 140 17 0 chrX 6314955 6315133 -160335163 + B2_Mm2 SINE B2 1 181 -14 5 633 204 330 18 27 chrX 6315349 6315461 -160334835 + L2 LINE L2 2374 2484 -935 5 633 371 338 39 13 chrX 6315864 6316017 -160334279 - MIR SINE MIR -10 252 96 5 633 186 213 45 76 chrX 6316172 6316206 -160334090 + L2c LINE L2 3324 3357 -30 5 633 1811 184 16 27 chrX 6316206 6316580 -160333716 + ORR1D1 LTR MaLR 1 370 -4 5 633 186 213 45 76 chrX 6316580 6316611 -160333685 + L2c LINE L2 3358 3387 0 5 633 222 274 155 65 chrX 6316625 6316793 -160333503 + L3 LINE CR1 3712 3894 -595 5 633 1481 208 103 29 chrX 6317333 6317674 -160332622 + ORR1D1 LTR MaLR 7 372 -2 5 633 1210 61 0 0 chrX 6318570 6318717 -160331579 + B1_Mus1 SINE Alu 2 148 0 5 633 255 169 0 63 chrX 6319595 6319658 -160330638 + L1M2 LINE L1 5569 5627 -664 5 633 222 337 10 10 chrX 6320287 6320386 -160329910 - MIRc SINE MIR 0 268 170 5 633 256 233 83 0 chrX 6321686 6321746 -160328550 + MER20 DNA MER1_type 112 176 -43 5 633 395 254 24 73 chrX 6321904 6322027 -160328269 + PB1D10 SINE Alu 1 117 0 5 633 218 153 13 53 chrX 6322028 6322104 -160328192 + GA-rich Low_complexity Low_complexity 2 74 0 5 633 180 152 0 0 chrX 6322131 6322164 -160328132 + (CATA)n Simple_repeat Simple_repeat 2 34 0 5 633 3523 228 109 26 chrX 6322549 6323605 -160326691 - Lx9 LINE L1 0 7644 6501 5 633 341 263 0 13 chrX 6323736 6323813 -160326483 - ID4_ SINE ID 0 83 8 5 633 325 329 102 20 chrX 6323889 6324143 -160326153 + L1M5 LINE L1 5366 5640 -522 5 633 1231 35 0 0 chrX 6324395 6324540 -160325756 + B1_Mus1 SINE Alu 2 146 -2 5 633 210 105 0 0 chrX 6324541 6324579 -160325717 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 5 633 1128 237 71 62 chrX 6324818 6325384 -160324912 - L1_Mur3 LINE L1 -2700 3180 2610 5 633 2950 299 50 20 chrX 6325399 6326483 -160323813 + Lx8 LINE L1 6191 7306 -167 5 633 261 0 0 0 chrX 6326498 6326527 -160323769 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 633 378 0 0 0 chrX 6326527 6326568 -160323728 + (GA)n Simple_repeat Simple_repeat 2 43 0 5 633 289 365 12 0 chrX 6326782 6326867 -160323429 + L2b LINE L2 3290 3375 0 5 633 414 179 0 0 chrX 6327495 6327590 -160322706 + (CA)n Simple_repeat Simple_repeat 2 96 0 5 633 296 321 38 0 chrX 6328128 6328234 -160322062 + PB1D10 SINE Alu 3 112 -5 5 633 254 347 142 17 chrX 6328260 6328436 -160321860 + L2a LINE L2 3225 3422 -4 5 633 227 351 21 0 chrX 6328531 6328625 -160321671 + L2a LINE L2 3331 3426 0 5 633 872 303 52 14 chrX 6329313 6329658 -160320638 - ORR1E LTR MaLR 0 359 2 5 633 201 39 0 0 chrX 6329844 6329870 -160320426 + (TGG)n Simple_repeat Simple_repeat 3 28 0 5 633 409 325 59 76 chrX 6329953 6330256 -160320040 - RMER10A LTR ERVL -133 309 12 5 633 333 118 0 0 chrX 6331498 6331549 -160318747 + (A)n Simple_repeat Simple_repeat 1 51 0 5 633 180 217 0 0 chrX 6332060 6332106 -160318190 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 633 451 318 51 11 chrX 6332399 6332574 -160317722 - Charlie10b DNA MER1_type 0 242 61 5 633 543 284 177 16 chrX 6332574 6332942 -160317354 - Lx7 LINE L1 -1456 6240 5814 5 633 559 265 76 0 chrX 6333038 6333170 -160317126 - B1_Mur1 SINE Alu -2 147 6 5 633 536 222 232 36 chrX 6333190 6333358 -160316938 - B3 SINE B2 -15 201 1 5 633 5189 202 50 8 chrX 6333444 6334589 -160315707 - Lx7 LINE L1 -42 5838 4646 5 633 1920 256 119 20 chrX 6334553 6335140 -160315156 + Lx7 LINE L1 6252 6896 -800 5 633 1127 82 0 0 chrX 6335334 6335468 -160314828 - B1_Mus1 SINE Alu -14 134 1 5 633 1043 68 0 0 chrX 6335509 6335641 -160314655 - L1_Mus1 LINE L1 0 6567 6436 5 633 258 388 50 9 chrX 6335748 6335923 -160314373 + MLT1J2 LTR MaLR 260 434 -10 5 633 802 286 78 24 chrX 6336051 6336384 -160313912 - MamRep1161 DNA TcMar -476 481 131 5 633 251 318 37 18 chrX 6336786 6336895 -160313401 + Lx8 LINE L1 7353 7463 -10 5 633 1065 289 56 21 chrX 6337005 6337371 -160312925 + MTD LTR MaLR 10 379 0 5 633 406 281 67 90 chrX 6337371 6337594 -160312702 - ORR1E LTR MaLR -123 236 19 5 633 261 0 0 0 chrX 6338848 6338877 -160311419 + (GA)n Simple_repeat Simple_repeat 1 29 0 5 633 547 322 45 84 chrX 6339353 6339535 -160310761 + MLT1A LTR MaLR 29 200 -174 5 633 213 0 81 0 chrX 6339535 6339572 -160310724 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 5 633 547 322 45 84 chrX 6339572 6339745 -160310551 + MLT1A LTR MaLR 201 370 -4 5 633 277 360 0 9 chrX 6340324 6340439 -160309857 + MIRb SINE MIR 145 262 -6 5 633 1470 149 14 0 chrX 6340622 6340844 -160309452 + URR1B DNA MER1_type 1 225 0 5 633 219 136 51 0 chrX 6340913 6340972 -160309324 + (TA)n Simple_repeat Simple_repeat 1 62 0 5 633 387 310 0 50 chrX 6341083 6341202 -160309094 + PB1D10 SINE Alu 5 117 0 5 633 4128 191 58 38 chrX 6341218 6342155 -160308141 - Lx2B LINE L1 -1 6999 6045 5 633 273 91 0 0 chrX 6342153 6342197 -160308099 + L1_Mur2 LINE L1 4828 4871 -1006 5 633 430 319 81 50 chrX 6342350 6342571 -160307725 + MLT1E2 LTR MaLR 285 512 -115 6 633 32 0 0 0 chrX 6342628 6342660 -160307636 + AT_rich Low_complexity Low_complexity 1 32 0 6 633 647 322 97 111 chrX 6342741 6343327 -160306969 + MER21B LTR ERV1 70 647 -216 6 633 304 308 35 103 chrX 6343466 6343582 -160306714 + B1F1 SINE Alu 6 113 -36 6 633 4807 56 5 2 chrX 6343733 6344337 -160305959 - L1_Mus2 LINE L1 0 6566 5961 6 633 1047 113 0 35 chrX 6344322 6344499 -160305797 + L1_Mus1 LINE L1 6415 6582 0 6 633 1719 68 0 1 chrX 6344498 6344736 -160305560 - L1_Mus2 LINE L1 -629 5937 5703 6 633 613 285 68 11 chrX 6344946 6345212 -160305084 + HAL1 LINE L1 1902 2182 -325 6 633 419 326 89 12 chrX 6345582 6345798 -160304498 + L2b LINE L2 2915 3146 -241 6 633 279 113 0 0 chrX 6345799 6345852 -160304444 + (A)n Simple_repeat Simple_repeat 1 53 0 6 633 525 250 121 84 chrX 6345875 6346246 -160304050 + L1MC4 LINE L1 7501 7885 -157 6 633 346 111 0 53 chrX 6346255 6346331 -160303965 + GA-rich Low_complexity Low_complexity 2 73 0 6 633 245 363 33 46 chrX 6346714 6346867 -160303429 + L2b LINE L2 3225 3375 0 6 633 447 106 0 0 chrX 6347144 6347210 -160303086 + (CGTG)n Simple_repeat Simple_repeat 1 66 0 6 633 450 301 88 88 chrX 6347218 6347469 -160302827 - B4 SINE B4 -39 253 3 6 633 711 300 57 0 chrX 6348905 6349135 -160301161 + Lx9 LINE L1 6711 6953 -691 6 633 339 310 24 14 chrX 6350037 6350133 -160300163 - PB1D10 SINE Alu -42 107 12 6 633 680 116 50 0 chrX 6350177 6350298 -160299998 - L1_Mus4 LINE L1 0 6636 6510 6 633 1056 191 51 47 chrX 6350524 6350738 -160299558 + B3 SINE B2 2 216 0 6 633 540 321 8 0 chrX 6351449 6351583 -160298713 - RSINE1 SINE B4 -29 136 2 6 633 327 25 0 0 chrX 6351845 6351885 -160298411 + (TC)n Simple_repeat Simple_repeat 2 41 0 6 633 342 328 23 78 chrX 6352048 6352266 -160298030 + MIR SINE MIR 33 240 -28 6 633 207 0 0 0 chrX 6354497 6354520 -160295776 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 6 633 483 33 0 0 chrX 6354584 6354645 -160295651 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 633 180 97 0 0 chrX 6354968 6354999 -160295297 + (CAAAC)n Simple_repeat Simple_repeat 1 31 0 6 633 582 15 0 0 chrX 6355274 6355341 -160294955 + (TC)n Simple_repeat Simple_repeat 1 67 0 6 633 338 319 0 3 chrX 6356170 6356467 -160293829 + (CCCGAA)n Simple_repeat Simple_repeat 1 295 0 6 633 370 337 0 0 chrX 6356405 6356583 -160293713 + (CCCCAG)n Simple_repeat Simple_repeat 3 180 0 6 633 225 185 121 15 chrX 6358162 6358228 -160292068 - MER74C LTR ERVL -68 392 320 6 633 319 137 20 0 chrX 6359029 6359080 -160291216 - RMER1B Other Other -232 834 783 6 633 332 203 23 30 chrX 6409094 6409396 -160240900 + (CA)n Simple_repeat Simple_repeat 1 299 0 6 633 405 219 25 0 chrX 6409553 6409672 -160240624 + (CAGA)n Simple_repeat Simple_repeat 3 124 0 6 633 412 325 83 0 chrX 6411646 6411874 -160238422 + L1MB7 LINE L1 5915 6161 -23 6 633 449 327 0 61 chrX 6412130 6412280 -160238016 - B1F2 SINE Alu 0 147 8 6 633 29 0 0 0 chrX 6412421 6412450 -160237846 + AT_rich Low_complexity Low_complexity 1 29 0 6 633 1252 267 91 47 chrX 6412619 6413312 -160236984 - Lx8 LINE L1 -1572 5901 5177 6 633 432 0 0 0 chrX 6413422 6413470 -160236826 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 633 231 36 0 0 chrX 6414981 6415009 -160235287 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 6 633 672 233 0 0 chrX 6415776 6415909 -160234387 + B1F1 SINE Alu 1 133 -16 6 633 358 297 8 99 chrX 6416348 6416479 -160233817 - PB1D7 SINE Alu 0 120 2 6 633 349 155 0 0 chrX 6416906 6416964 -160233332 - ORR1B2 LTR MaLR -309 58 1 6 633 342 140 0 17 chrX 6416966 6417024 -160233272 - ORR1B2-int LTR MaLR -2 1507 1451 6 633 707 142 51 0 chrX 6417013 6417146 -160233150 - ORR1B2-int LTR MaLR -1805 158 19 6 633 1941 134 92 6 chrX 6417151 6417489 -160232807 - ORR1B2 LTR MaLR 0 367 1 6 633 692 230 51 51 chrX 6418254 6418292 -160232004 - B3A SINE B2 0 198 167 6 633 567 81 0 0 chrX 6418292 6418378 -160231918 + (CA)n Simple_repeat Simple_repeat 1 86 0 6 633 692 230 51 51 chrX 6418378 6418536 -160231760 - B3A SINE B2 -32 166 2 6 633 953 27 7 20 chrX 6418658 6418809 -160231487 - RMER17B LTR ERVK -498 460 312 6 633 192 286 32 0 chrX 6419477 6419540 -160230756 - L4 LINE RTE -7 2022 1958 6 633 363 274 26 0 chrX 6420058 6420171 -160230125 - L1MA5 LINE L1 -10 6290 6175 6 633 210 71 0 0 chrX 6420706 6420734 -160229562 + (T)n Simple_repeat Simple_repeat 1 28 0 6 633 1295 51 28 0 chrX 6420742 6420920 -160229376 - L1Md_A LINE L1 -2 6580 6398 6 633 21 0 0 0 chrX 6420989 6421010 -160229286 + AT_rich Low_complexity Low_complexity 1 21 0 6 633 234 270 118 0 chrX 6421084 6421175 -160229121 - ID4 SINE ID -49 103 5 6 633 40 49 0 0 chrX 6421175 6421236 -160229060 + AT_rich Low_complexity Low_complexity 1 61 0 6 633 274 273 15 0 chrX 6421854 6421920 -160228376 + MER91B DNA Tip100 87 153 -37 6 634 454 270 42 12 chrX 6423022 6423187 -160227109 + L1M2 LINE L1 4900 5069 -1074 6 634 401 294 0 0 chrX 6423195 6423287 -160227009 + B3A SINE B2 65 156 -42 6 634 504 72 0 0 chrX 6423295 6423364 -160226932 + (CA)n Simple_repeat Simple_repeat 1 69 0 6 634 212 318 44 56 chrX 6423627 6423717 -160226579 - L2 LINE L2 -640 2779 2691 6 634 869 172 0 16 chrX 6423734 6423902 -160226394 + GA-rich Low_complexity Low_complexity 1 165 0 6 634 1074 144 0 0 chrX 6423902 6424082 -160226214 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 634 869 172 0 16 chrX 6424082 6424096 -160226200 + polypurine Low_complexity Low_complexity 166 179 0 6 634 344 281 93 10 chrX 6424128 6424225 -160226071 + PB1D7 SINE Alu 10 114 -6 6 634 356 312 85 10 chrX 6424475 6424676 -160225620 - L1MD LINE L1 -441 5801 5586 6 634 772 215 0 7 chrX 6425657 6425802 -160224494 + B1_Mur2 SINE Alu 1 144 -5 6 634 921 176 0 0 chrX 6425802 6425978 -160224318 + GA-rich Low_complexity Low_complexity 4 179 0 6 634 1116 133 0 0 chrX 6425987 6426167 -160224129 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 634 344 281 93 10 chrX 6426213 6426310 -160223986 + PB1D7 SINE Alu 10 114 -6 6 634 652 281 23 0 chrX 6426634 6426805 -160223491 + B3 SINE B2 42 216 0 6 634 1276 88 21 0 chrX 6426894 6427088 -160223208 - L1_Mus4 LINE L1 -8 6628 6431 6 634 252 0 0 0 chrX 6427836 6427864 -160222432 + (CAAAAA)n Simple_repeat Simple_repeat 1 28 0 6 634 23 0 0 0 chrX 6427869 6427892 -160222404 + AT_rich Low_complexity Low_complexity 1 23 0 6 634 195 344 124 10 chrX 6427895 6427992 -160222304 + MIR SINE MIR 140 247 -15 6 634 288 85 6 0 chrX 6428141 6428196 -160222100 - L1Md_F2 LINE L1 -1 6581 6522 6 634 2279 46 0 14 chrX 6428432 6428719 -160221577 - L1Md_F2 LINE L1 -202 6380 6098 6 634 281 289 0 95 chrX 6428758 6428853 -160221443 - ID4_ SINE ID -56 96 11 6 634 873 238 44 15 chrX 6429631 6429836 -160220460 + ID_B1 SINE B4 4 214 -10 6 634 21 36 0 0 chrX 6429868 6429896 -160220400 + AT_rich Low_complexity Low_complexity 1 28 0 6 634 198 118 0 0 chrX 6431738 6431772 -160218524 + (T)n Simple_repeat Simple_repeat 1 34 0 6 634 212 296 11 22 chrX 6433452 6433542 -160216754 + (CATA)n Simple_repeat Simple_repeat 3 91 0 6 634 635 223 15 25 chrX 6433645 6433847 -160216449 + L1MD LINE L1 5106 5305 -841 6 634 472 58 0 2 chrX 6433854 6433922 -160216374 + L1_Mus1 LINE L1 6079 6152 -430 6 634 449 303 112 9 chrX 6433952 6434175 -160216121 + L1MD2 LINE L1 5882 6127 -232 6 634 210 118 0 0 chrX 6434176 6434210 -160216086 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 634 334 211 82 82 chrX 6434367 6434501 -160215795 + L1MD2 LINE L1 6144 6277 -82 6 634 592 337 84 54 chrX 6434805 6435330 -160214966 + MLT1E1A LTR MaLR 1 657 -23 6 634 3186 50 5 2 chrX 6435479 6435878 -160214418 + MTB LTR MaLR 1 400 0 6 634 835 66 138 7 chrX 6436664 6436802 -160213494 + L1_Mus3 LINE L1 6476 6631 -7 6 634 308 143 0 0 chrX 6437056 6437105 -160213191 + tRNA-Ala-GCY_ tRNA tRNA 9 57 -18 6 634 296 188 146 0 chrX 6437105 6437127 -160213169 + ID4 SINE ID 15 94 -58 6 634 295 299 90 62 chrX 6438021 6438199 -160212097 - MIRb SINE MIR -64 204 22 6 634 387 267 81 86 chrX 6438808 6439029 -160211267 + MIRb SINE MIR 1 220 -48 6 634 279 331 158 0 chrX 6440679 6440806 -160209490 + MIRc SINE MIR 60 206 -62 6 634 185 211 19 0 chrX 6441321 6441373 -160208923 + CT-rich Low_complexity Low_complexity 1 53 0 6 634 384 22 0 0 chrX 6441385 6441430 -160208866 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 634 25 0 0 0 chrX 6442209 6442234 -160208062 + AT_rich Low_complexity Low_complexity 1 25 0 6 634 254 123 36 36 chrX 6442247 6442357 -160207939 + (TATAA)n Simple_repeat Simple_repeat 5 114 0 6 634 35 41 0 0 chrX 6442469 6442518 -160207778 + AT_rich Low_complexity Low_complexity 1 49 0 6 634 225 288 119 48 chrX 6442548 6442632 -160207664 + MIRb SINE MIR 40 129 -139 6 634 4315 75 31 0 chrX 6442651 6443227 -160207069 - L1Md_F2 LINE L1 -2 6580 5987 6 634 324 0 0 0 chrX 6444423 6444459 -160205837 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 634 261 0 0 0 chrX 6444459 6444487 -160205809 + (GA)n Simple_repeat Simple_repeat 1 29 0 6 634 323 384 88 19 chrX 6444621 6444884 -160205412 + L1MC4a LINE L1 5633 5913 -1969 6 634 623 119 139 0 chrX 6445342 6445443 -160204853 - MIRb SINE MIR -113 155 41 6 634 222 37 0 0 chrX 6447750 6447777 -160202519 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 6 634 2486 108 13 5 chrX 6447777 6448150 -160202146 + Lx2 LINE L1 6621 6996 -1 6 634 240 336 85 8 chrX 6448464 6448593 -160201703 + MER102b DNA MER1_type 2 140 -201 6 634 908 260 52 0 chrX 6448593 6448843 -160201453 - L1MC LINE L1 -621 5723 5461 7 634 291 163 81 11 chrX 6448879 6448966 -160201330 - L1M4b LINE L1 -4208 3126 3034 7 634 303 278 0 0 chrX 6449328 6449424 -160200872 - ID4_ SINE ID -41 111 16 7 634 266 310 0 0 chrX 6449358 6449429 -160200867 - tRNA-Ala-GCY_ tRNA tRNA 0 75 5 7 634 447 338 24 62 chrX 6449464 6449675 -160200621 - MER102b DNA MER1_type -94 247 45 7 634 344 339 8 8 chrX 6450056 6450181 -160200115 - L2 LINE L2 -496 2923 2799 7 634 2091 306 118 44 chrX 6450901 6451870 -160198426 - MER45B DNA Tip100 0 1040 1 7 634 23 0 0 0 chrX 6451990 6452013 -160198283 + AT_rich Low_complexity Low_complexity 1 23 0 7 634 288 0 0 0 chrX 6452247 6452279 -160198017 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 634 475 351 65 24 chrX 6453870 6454118 -160196178 + MIR SINE MIR 5 262 0 7 634 261 0 0 0 chrX 6454831 6454860 -160195436 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 634 945 279 20 36 chrX 6456950 6457225 -160193071 + B4A SINE B4 8 286 -6 7 634 2229 90 18 59 chrX 6457363 6457704 -160192592 - ORR1A2 LTR MaLR 0 327 1 7 634 2643 224 5 9 chrX 6457915 6458496 -160191800 - Lx6 LINE L1 -803 6657 6079 7 634 1864 115 7 16 chrX 6458570 6458880 -160191416 - L1_Mur3 LINE L1 -831 5049 4743 7 634 267 167 0 48 chrX 6458867 6458930 -160191366 - L1_Mur3 LINE L1 -1249 4628 4569 7 634 1171 159 42 19 chrX 6458919 6459182 -160191114 - L1_Mur3 LINE L1 -3231 2649 2381 7 634 1252 235 36 44 chrX 6459195 6459438 -160190858 + L1_Mur3 LINE L1 804 1041 -6687 7 634 270 0 0 0 chrX 6459438 6459468 -160190828 + (TG)n Simple_repeat Simple_repeat 2 31 0 7 634 1252 235 36 44 chrX 6459468 6459611 -160190685 + L1_Mur3 LINE L1 1042 1187 -6541 7 634 396 0 0 0 chrX 6459746 6459790 -160190506 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 634 4417 157 87 35 chrX 6459791 6460899 -160189397 + L1_Mur3 LINE L1 1187 2348 -3532 7 634 357 86 0 0 chrX 6461008 6461066 -160189230 + (TC)n Simple_repeat Simple_repeat 1 58 0 7 634 699 214 90 0 chrX 6461067 6461245 -160189051 - Lx9 LINE L1 -337 7307 7114 7 634 575 182 21 0 chrX 6461248 6461391 -160188905 + Lx9 LINE L1 7499 7644 0 7 634 285 253 111 33 chrX 6461409 6461499 -160188797 - ID_B1 SINE B4 -1 223 127 7 634 353 296 14 7 chrX 6461539 6461685 -160188611 - L1M2 LINE L1 -669 5622 5476 7 634 1106 119 39 17 chrX 6461752 6461931 -160188365 - B2_Mm2 SINE B2 -7 188 6 7 634 5298 89 68 7 chrX 6461967 6462072 -160188224 - L1_Mur2 LINE L1 -3711 2166 2062 7 634 435 19 0 0 chrX 6462072 6462124 -160188172 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 634 5298 94 66 4 chrX 6462124 6463428 -160186868 - L1_Mur2 LINE L1 -3816 2061 663 7 634 348 229 52 10 chrX 6463429 6463526 -160186770 - L1M2 LINE L1 -803 5488 5388 7 634 423 0 0 0 chrX 6463579 6463626 -160186670 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 634 23 0 0 0 chrX 6463638 6463661 -160186635 + AT_rich Low_complexity Low_complexity 1 23 0 7 634 4037 222 110 37 chrX 6463796 6465045 -160185251 - Lx9 LINE L1 -208 7436 6097 7 634 2893 248 122 39 chrX 6465072 6466551 -160183745 - L1M2 LINE L1 -864 5279 3679 7 634 258 111 0 0 chrX 6466572 6466589 -160183707 + (A)n Simple_repeat Simple_repeat 1 17 0 7 634 1214 48 7 0 chrX 6466589 6466736 -160183560 + B1_Mus1 SINE Alu 1 148 0 7 634 258 111 0 0 chrX 6466736 6466763 -160183533 + (A)n Simple_repeat Simple_repeat 1 27 0 7 634 220 224 17 0 chrX 6466772 6466830 -160183466 - B4 SINE B4 -217 75 17 7 634 569 246 28 6 chrX 6466846 6467026 -160183270 - L1M2 LINE L1 -2576 3567 3384 7 634 700 329 39 31 chrX 6467037 6467294 -160183002 - MLT1A0 LTR MaLR -106 259 1 7 634 240 167 19 0 chrX 6467508 6467562 -160182734 - MLT1C LTR MaLR -14 491 437 7 634 382 231 13 0 chrX 6467607 6467685 -160182611 + ID_B1 SINE B4 143 221 -3 7 634 757 286 78 50 chrX 6467678 6467961 -160182335 - MLT1C LTR MaLR -25 442 152 7 634 512 291 102 65 chrX 6468030 6468245 -160182051 - MLT1C-int LTR MaLR -211 1160 965 7 634 374 335 0 86 chrX 6468504 6468666 -160181630 - MLT1C-int LTR MaLR -692 679 532 7 634 346 308 73 55 chrX 6468666 6468831 -160181465 + MLT1B LTR MaLR 3 170 -220 7 634 232 343 49 29 chrX 6468878 6468980 -160181316 + MLT1B LTR MaLR 178 281 -84 7 634 614 320 85 50 chrX 6468944 6469361 -160180935 - MLT1C-int LTR MaLR -824 547 1 7 634 342 314 128 117 chrX 6469361 6469512 -160180784 - MLT1C LTR MaLR 0 467 300 7 634 627 14 0 0 chrX 6469512 6469584 -160180712 + (TCC)n Simple_repeat Simple_repeat 2 73 0 7 634 342 314 128 117 chrX 6469584 6469894 -160180402 - MLT1C LTR MaLR -168 299 1 7 634 193 286 114 0 chrX 6470118 6470188 -160180108 + L2c LINE L2 3270 3347 -40 7 634 231 256 45 120 chrX 6470267 6470400 -160179896 - RMER6D LTR ERVK -44 676 554 7 634 258 106 0 0 chrX 6470455 6470502 -160179794 + (A)n Simple_repeat Simple_repeat 1 47 0 7 634 375 283 47 9 chrX 6470967 6471074 -160179222 + L2a LINE L2 3306 3416 -10 7 634 200 222 0 0 chrX 6471457 6471493 -160178803 + polypyrimidine Low_complexity Low_complexity 4 39 0 7 634 413 261 117 8 chrX 6473138 6473258 -160177038 - MIRb SINE MIR -52 216 84 7 634 1115 66 0 0 chrX 6473292 6473429 -160176867 + B1_Mus2 SINE Alu 2 138 -9 7 634 424 323 102 30 chrX 6473508 6473674 -160176622 + MER20 DNA MER1_type 1 178 -41 7 634 30 77 0 0 chrX 6473677 6473742 -160176554 + AT_rich Low_complexity Low_complexity 1 65 0 7 634 350 291 36 43 chrX 6474099 6474239 -160176057 + MIRc SINE MIR 68 206 -62 7 634 625 201 52 32 chrX 6475647 6475801 -160174495 - Lx6 LINE L1 -10 7450 7294 7 634 321 197 0 0 chrX 6475803 6475869 -160174427 + (TA)n Simple_repeat Simple_repeat 2 67 0 7 634 314 170 0 65 chrX 6475931 6476038 -160174258 + (CATATA)n Simple_repeat Simple_repeat 3 102 0 7 634 507 33 0 0 chrX 6476039 6476100 -160174196 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 7 634 1732 196 127 15 chrX 6476111 6476505 -160173791 - Lx6 LINE L1 -210 7250 6813 7 634 639 260 27 7 chrX 6477331 6477478 -160172818 - MER5A DNA MER1_type 0 189 40 7 634 234 267 172 16 chrX 6477772 6477894 -160172402 - Tigger12 DNA MER2_type -1069 890 750 7 634 277 342 145 48 chrX 6478013 6478385 -160171911 - L3 LINE CR1 -535 3954 3547 7 634 423 218 8 61 chrX 6478388 6478520 -160171776 + Lx6 LINE L1 7293 7417 -43 7 634 387 0 0 0 chrX 6478524 6478567 -160171729 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 7 634 865 308 50 83 chrX 6478665 6479026 -160171270 - ORR1E LTR MaLR -7 352 4 7 634 294 324 103 27 chrX 6479175 6479359 -160170937 + L2a LINE L2 2918 3115 -311 7 634 216 200 0 0 chrX 6479617 6479662 -160170634 + L2b LINE L2 3331 3375 0 7 634 1142 83 0 0 chrX 6481608 6481753 -160168543 + B1_Mus1 SINE Alu 3 147 -1 7 634 228 203 85 0 chrX 6483206 6483265 -160167031 - MER5A DNA MER1_type -41 148 85 7 634 210 368 52 21 chrX 6483814 6484008 -160166288 - L2a LINE L2 0 3426 3227 7 634 2247 130 33 6 chrX 6484085 6484449 -160165847 - ORR1C1 LTR MaLR -4 374 1 7 634 769 289 37 70 chrX 6484630 6484928 -160165368 - B4 SINE B4 -2 290 3 7 634 383 276 27 33 chrX 6485358 6485508 -160164788 + MIRb SINE MIR 120 268 0 7 634 1178 81 3 0 chrX 6485958 6486255 -160164041 + (TG)n Simple_repeat Simple_repeat 1 298 0 7 634 8808 114 20 9 chrX 6486573 6486662 -160163634 - Lx3B LINE L1 -4 6969 6876 7 634 204 40 0 0 chrX 6486662 6486687 -160163609 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 7 634 8808 105 91 7 chrX 6486687 6488269 -160162027 - Lx3B LINE L1 -98 6875 5165 7 634 879 123 0 27 chrX 6488353 6488503 -160161793 - B2_Mm2 SINE B2 -49 146 1 7 634 1351 300 61 8 chrX 6488846 6489320 -160160976 - Lx8 LINE L1 -123 7350 6852 7 634 1347 186 186 28 chrX 6489367 6489727 -160160569 - Lx4A LINE L1 -923 6135 5719 7 634 260 167 0 0 chrX 6489727 6489769 -160160527 + tRNA-Arg-CGY_ tRNA tRNA 9 50 -26 7 634 860 257 40 200 chrX 6489957 6490442 -160159854 - L1_Mur3 LINE L1 -2953 2927 2456 7 634 210 37 0 0 chrX 6490442 6490469 -160159827 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 634 1145 36 0 0 chrX 6490469 6490609 -160159687 - B1_Mm SINE Alu -2 145 6 7 634 290 254 16 0 chrX 6490507 6490629 -160159667 - ORR1B1-int LTR MaLR -755 754 631 7 634 860 257 40 200 chrX 6490609 6490933 -160159363 - L1_Mur3 LINE L1 -3425 2455 2130 7 634 810 302 41 61 chrX 6490942 6491334 -160158962 - Lx8 LINE L1 -865 6608 6225 7 634 368 216 4 0 chrX 6491601 6491696 -160158600 - Lx7 LINE L1 -469 5822 5707 7 634 1257 247 24 102 chrX 6491698 6492081 -160158215 + ORR1E LTR MaLR 1 353 -6 7 634 880 275 63 19 chrX 6492085 6492452 -160157844 - Lx7 LINE L1 -191 5689 5307 7 634 1158 91 62 0 chrX 6492469 6492645 -160157651 - B2_Mm2 SINE B2 -7 188 2 7 634 957 299 24 43 chrX 6492650 6493142 -160157154 - L1M2 LINE L1 -819 5324 4842 7 634 854 156 50 0 chrX 6493142 6493283 -160157013 + B1_Mur3 SINE Alu 1 148 -1 7 634 645 216 57 61 chrX 6493291 6493538 -160156758 + L1_Mur3 LINE L1 3912 4157 -1723 7 634 1054 83 105 23 chrX 6493541 6493703 -160156593 + B2_Mm2 SINE B2 1 179 -16 7 634 666 37 0 0 chrX 6493703 6493784 -160156512 + (GA)n Simple_repeat Simple_repeat 2 82 0 7 634 252 304 66 20 chrX 6493844 6494042 -160156254 - L1_Mur3 LINE L1 -4231 1649 1443 7 634 780 180 7 0 chrX 6494099 6494238 -160156058 - URR1A DNA MER1_type 0 226 87 7 634 12945 78 5 2 chrX 6494253 6496748 -160153548 - L1_Mus1 LINE L1 -1 6566 4067 7 634 947 198 4 12 chrX 6496748 6496782 -160153514 - L1_Mur1 LINE L1 -4436 1450 1418 7 634 4193 39 12 4 chrX 6496782 6497298 -160152998 - L1Md_F3 LINE L1 -3 6581 6062 7 634 6133 81 8 61 chrX 6497298 6498369 -160151927 - L1VL1 LINE L1 -2497 1201 187 7 634 433 210 36 24 chrX 6498375 6498458 -160151838 - URR1A DNA MER1_type -142 84 1 7 634 428 312 11 0 chrX 6498458 6498674 -160151622 - L1_Rod LINE L1 -4446 1401 1184 7 634 348 317 26 62 chrX 6500231 6500423 -160149873 - L1M4b LINE L1 -5676 1658 1474 1 634 398 307 77 18 chrX 6501777 6502049 -160148247 + B4A SINE B4 1 288 -4 2 634 1218 55 0 0 chrX 6502113 6502259 -160148037 + B1_Mus1 SINE Alu 1 146 -2 3 634 250 314 19 10 chrX 6502284 6502387 -160147909 - MIR SINE MIR 0 262 159 4 634 1325 155 0 39 chrX 6502439 6502668 -160147628 + URR1A DNA MER1_type 6 225 -1 5 634 544 313 50 66 chrX 6504347 6504663 -160145633 + B4 SINE B4 2 274 -18 6 634 210 260 0 0 chrX 6504987 6505037 -160145259 + CT-rich Low_complexity Low_complexity 1 50 0 7 634 276 324 107 0 chrX 6506320 6506421 -160143875 - MER63D DNA AcHobo -708 353 255 8 634 903 273 59 50 chrX 6507669 6507953 -160142343 - L1M4 LINE L1 -918 5228 4932 9 634 1949 152 63 8 chrX 6507953 6508317 -160141979 - ORR1C2 LTR MaLR 0 384 1 1 634 903 273 59 50 chrX 6508317 6508607 -160141689 - L1M4 LINE L1 -1215 4931 4649 9 634 1257 27 0 0 chrX 6509148 6509294 -160141002 + B1_Mm SINE Alu 2 147 0 1 634 185 296 45 80 chrX 6512279 6512367 -160137929 - MIRc SINE MIR -151 117 33 1 634 238 133 33 0 chrX 6512396 6512416 -160137880 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 634 369 0 0 0 chrX 6512416 6512457 -160137839 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 634 238 133 33 0 chrX 6512457 6512496 -160137800 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 634 382 333 56 0 chrX 6513249 6513357 -160136939 + RSINE1 SINE B4 4 117 -48 1 634 450 0 0 0 chrX 6513357 6513407 -160136889 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 634 865 234 133 26 chrX 6514028 6514292 -160136004 + B4A SINE B4 1 292 0 1 634 346 274 0 14 chrX 6514701 6514775 -160135521 + ID4 SINE ID 7 79 -4 1 634 302 220 50 10 chrX 6514819 6514920 -160135376 + GA-rich Low_complexity Low_complexity 2 106 0 2 634 201 244 0 0 chrX 6515378 6515423 -160134873 + CT-rich Low_complexity Low_complexity 2 46 0 2 634 265 322 80 47 chrX 6517422 6517572 -160132724 + MIRb SINE MIR 91 245 -23 2 634 278 371 34 0 chrX 6518346 6518435 -160131861 - MamRep1894 DNA hAT -12 111 20 2 634 412 284 40 40 chrX 6518827 6518841 -160131455 - CYRA11_Mm Unknown Y-chromosome -278 339 235 2 634 912 148 19 0 chrX 6518841 6518996 -160131300 + URR1B DNA MER1_type 68 225 0 2 634 423 0 0 0 chrX 6520403 6520450 -160129846 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 634 278 214 29 11 chrX 6522436 6522615 -160127681 + CT-rich Low_complexity Low_complexity 1 182 0 2 634 210 200 20 0 chrX 6522843 6522893 -160127403 + (TA)n Simple_repeat Simple_repeat 2 52 0 2 634 253 227 0 29 chrX 6524645 6524713 -160125583 + CT-rich Low_complexity Low_complexity 4 69 0 2 634 400 311 162 7 chrX 6525950 6526086 -160124210 + RSINE1 SINE B4 3 159 -6 3 634 2192 208 21 31 chrX 6526211 6526907 -160123389 + Lx9 LINE L1 5386 6108 -1536 3 634 2476 268 132 27 chrX 6526981 6527044 -160123252 + Lx9 LINE L1 6343 6412 -1232 3 634 341 22 0 21 chrX 6527044 6527091 -160123205 + (CAAAA)n Simple_repeat Simple_repeat 3 48 0 3 634 2476 268 132 27 chrX 6527091 6527367 -160122929 + Lx9 LINE L1 6413 6743 -901 3 634 1549 196 135 9 chrX 6527367 6527707 -160122589 - ORR1C2 LTR MaLR 0 384 2 3 634 2476 268 132 27 chrX 6527707 6528370 -160121926 + Lx9 LINE L1 6744 7451 -193 3 634 3005 221 101 72 chrX 6528370 6529271 -160121025 - RLTR25B LTR ERVK 0 1028 102 3 634 44 84 0 0 chrX 6529318 6529425 -160120871 + AT_rich Low_complexity Low_complexity 1 107 0 3 634 207 0 0 0 chrX 6529520 6529543 -160120753 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 634 251 300 50 10 chrX 6529622 6529723 -160120573 - Lx7 LINE L1 -385 7311 7207 3 634 256 272 136 0 chrX 6529803 6529906 -160120390 - Lx6 LINE L1 -169 7291 7175 3 634 239 158 70 0 chrX 6530211 6530268 -160120028 - L1M4 LINE L1 -297 5877 5817 3 634 270 288 24 0 chrX 6530333 6530458 -160119838 - L1MEf LINE L1 -3285 3259 3132 4 634 322 241 87 26 chrX 6530466 6530581 -160119715 - L1MEf LINE L1 -4129 2511 2390 4 634 1370 98 5 0 chrX 6530637 6530831 -160119465 + B2_Mm2 SINE B2 1 195 0 4 634 37 52 0 0 chrX 6530848 6530906 -160119390 + AT_rich Low_complexity Low_complexity 1 58 0 4 634 476 317 57 64 chrX 6530907 6531204 -160119092 - L1MEf LINE L1 -4319 2321 2027 4 634 344 40 20 0 chrX 6531205 6531255 -160119041 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 634 261 0 0 0 chrX 6531270 6531299 -160118997 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 634 2465 58 0 11 chrX 6531306 6531639 -160118657 - L1_Mus1 LINE L1 -665 5902 5571 4 634 3307 78 22 4 chrX 6531639 6532092 -160118204 - L1Md_F2 LINE L1 -1 6581 6121 4 634 1592 187 5 223 chrX 6532092 6532397 -160117899 - L1_Mus1 LINE L1 -307 5570 5393 4 634 5356 45 5 1 chrX 6532398 6533059 -160117237 + L1_Mus1 LINE L1 5904 6566 -1 4 634 513 141 0 0 chrX 6533063 6533148 -160117148 + (TA)n Simple_repeat Simple_repeat 1 85 0 4 634 721 312 61 39 chrX 6533180 6533410 -160116886 - B4A SINE B4 -53 239 5 4 634 820 317 55 16 chrX 6533431 6533937 -160116359 - L1MEf LINE L1 -4623 2017 1492 4 634 292 348 104 23 chrX 6534646 6534905 -160115391 - L1MEf LINE L1 -6218 329 50 4 634 933 278 45 20 chrX 6535005 6535401 -160114895 + L1MB7 LINE L1 5769 6174 -10 5 634 6760 169 64 9 chrX 6535473 6537895 -160112401 + Lx5 LINE L1 4497 7037 -13 5 634 215 301 169 0 chrX 6538582 6538665 -160111631 + PB1 SINE Alu 1 97 -30 5 634 222 65 0 0 chrX 6538777 6538808 -160111488 - B3A SINE B2 -166 32 2 5 634 1215 299 48 8 chrX 6538906 6539260 -160111036 + ORR1B2 LTR MaLR 3 370 0 5 634 869 251 25 49 chrX 6539260 6539481 -160110815 + ORR1B2-int LTR MaLR 1 215 -1155 5 634 1741 184 33 107 chrX 6539481 6539840 -160110456 + RMER10A LTR ERVL 1 333 -109 5 634 6533 47 14 0 chrX 6539840 6540632 -160109664 + RLTR13B4 LTR ERVK 1 803 0 5 634 1741 184 33 107 chrX 6540632 6540722 -160109574 + RMER10A LTR ERVL 334 417 -25 5 634 359 240 44 76 chrX 6540940 6541098 -160109198 - RMER17C-int LTR ERVK -372 2866 2714 5 634 748 191 120 48 chrX 6541098 6541390 -160108906 - RLTR19-int LTR ERVK -2274 3863 3551 5 634 869 234 90 129 chrX 6541589 6542378 -160107918 - RLTR19-int LTR ERVK -2944 3193 2436 5 634 2043 165 22 17 chrX 6542378 6542735 -160107561 + ORR1B2 LTR MaLR 1 359 -8 5 634 857 124 36 51 chrX 6542829 6543025 -160107271 - RLTR42-int LTR ERVK -3395 2127 1935 5 634 307 248 9 56 chrX 6543026 6543133 -160107163 - RLTR42-int LTR ERVK -3551 1971 1870 5 634 370 206 125 3 chrX 6543560 6543693 -160106603 - RLTR42-int LTR ERVK -3740 1782 1572 5 634 311 195 0 24 chrX 6543749 6543833 -160106463 - RLTR42-int LTR ERVK -5160 977 896 5 634 452 198 0 5 chrX 6543920 6544015 -160106281 + Lx2 LINE L1 5864 5954 -1043 6 634 349 300 51 35 chrX 6544604 6544801 -160105495 - RMER10A LTR ERVL -14 428 229 6 634 456 243 19 10 chrX 6544825 6544929 -160105367 + MT2A LTR ERVL 100 204 -329 6 634 756 52 0 0 chrX 6544955 6545052 -160105244 + (GA)n Simple_repeat Simple_repeat 2 98 0 6 634 590 236 49 24 chrX 6545070 6545236 -160105060 + ORR1D2 LTR MaLR 189 370 0 6 634 183 298 58 58 chrX 6546395 6546516 -160103780 - L4 LINE RTE -554 1475 1355 6 634 234 239 41 27 chrX 6546576 6546649 -160103647 + RLTR42 LTR ERVK 159 232 -7 6 634 2091 196 42 14 chrX 6546855 6547034 -160103262 - Lx6 LINE L1 -12 7448 7259 6 634 212 0 36 0 chrX 6547034 6547062 -160103234 + (CAA)n Simple_repeat Simple_repeat 2 30 0 6 634 2091 196 42 14 chrX 6547062 6547200 -160103096 - Lx6 LINE L1 -202 7258 7119 6 634 567 0 0 0 chrX 6547200 6547263 -160103033 + (TA)n Simple_repeat Simple_repeat 2 64 0 6 634 2091 196 42 14 chrX 6547263 6547369 -160102927 - Lx6 LINE L1 -342 7118 7013 6 634 1085 289 95 44 chrX 6547584 6548195 -160102101 + RLTR42-int LTR ERVK 187 828 -4694 6 634 567 0 0 0 chrX 6549140 6549203 -160101093 + (GA)n Simple_repeat Simple_repeat 2 64 0 7 634 202 143 24 0 chrX 6550165 6550207 -160100089 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 7 79 22089 108 16 7 chrX 6551326 6554063 -160096233 + L1_Mus1 LINE L1 2367 5113 -770 7 635 9013 6 0 0 chrX 6554063 6555059 -160095237 + L1Md_T LINE L1 5587 6582 0 7 635 22089 77 5 2 chrX 6555059 6556491 -160093805 + L1_Mus1 LINE L1 5114 6566 -1 7 635 23 33 0 0 chrX 6556788 6556818 -160093478 + AT_rich Low_complexity Low_complexity 1 30 0 7 635 338 39 0 38 chrX 6557132 6557185 -160093111 + (CAAA)n Simple_repeat Simple_repeat 1 51 0 7 635 22 35 0 0 chrX 6558120 6558149 -160092147 + AT_rich Low_complexity Low_complexity 1 29 0 7 635 9230 199 125 81 chrX 6558153 6559551 -160090745 + L1_Rod LINE L1 1696 3120 -2727 7 635 216 0 0 0 chrX 6559551 6559575 -160090721 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 7 635 9230 199 125 81 chrX 6559575 6561739 -160088557 + L1_Rod LINE L1 3121 5413 -434 7 635 372 85 16 33 chrX 6562138 6562199 -160088097 - HAL1-3A_ME LINE L1 -824 2034 1975 7 635 653 297 58 74 chrX 6562230 6562404 -160087892 - B4A SINE B4 0 292 121 8 635 342 0 0 0 chrX 6562404 6562442 -160087854 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 635 653 297 58 74 chrX 6562442 6562525 -160087771 - B4A SINE B4 -172 120 39 8 635 334 281 72 46 chrX 6563056 6563209 -160087087 - L1ME3B LINE L1 -14 6226 6070 8 635 239 346 0 0 chrX 6564144 6564222 -160086074 + CT-rich Low_complexity Low_complexity 4 81 0 8 635 238 88 34 34 chrX 6564383 6564442 -160085854 + T-rich Low_complexity Low_complexity 2 60 0 8 635 1371 247 28 30 chrX 6564442 6564931 -160085365 - Lx9 LINE L1 -1692 5952 5429 8 635 4138 242 68 31 chrX 6564947 6566161 -160084135 + Lx9 LINE L1 6367 7624 -20 8 635 27 0 0 0 chrX 6566163 6566190 -160084106 + AT_rich Low_complexity Low_complexity 1 27 0 8 635 594 320 28 6 chrX 6566198 6566374 -160083922 + B3A SINE B2 1 180 -18 8 635 794 0 31 0 chrX 6566723 6566819 -160083477 + (GGGAGA)n Simple_repeat Simple_repeat 6 104 0 8 635 22 56 0 0 chrX 6567383 6567419 -160082877 + AT_rich Low_complexity Low_complexity 1 36 0 9 635 5307 14 0 0 chrX 6567806 6568444 -160081852 + L1Md_T LINE L1 4949 5586 -297 9 635 8536 30 0 0 chrX 6568444 6569440 -160080856 + L1Md_T LINE L1 5587 6582 0 9 635 357 364 160 16 chrX 6569693 6570011 -160080285 - MLT1D LTR MaLR -114 391 28 9 635 3338 61 0 0 chrX 6570060 6570503 -160079793 + L1_Mus3 LINE L1 5616 6058 -580 9 635 392 300 20 10 chrX 6570568 6570669 -160079627 - B4A SINE B4 -165 127 26 9 635 390 273 36 9 chrX 6570751 6570862 -160079434 + LSU-rRNA_Hsa rRNA rRNA 4919 5032 -3 9 635 23 33 0 0 chrX 6571026 6571056 -160079240 + AT_rich Low_complexity Low_complexity 1 30 0 9 635 535 320 20 0 chrX 6571342 6571492 -160078804 - ID_B1 SINE B4 -5 219 67 9 635 276 224 52 0 chrX 6571561 6571619 -160078677 + PB1D10 SINE Alu 17 77 -43 9 635 1293 235 159 18 chrX 6572124 6572571 -160077725 + RLTR12B LTR ERVK 1 510 -18 9 635 261 0 0 0 chrX 6573779 6573808 -160076488 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 635 1914 301 92 34 chrX 6573839 6574767 -160075529 + Lx8 LINE L1 6449 7442 -31 1 635 917 112 101 45 chrX 6574767 6574945 -160075351 + B2_Mm2 SINE B2 1 188 -7 1 635 1914 301 92 34 chrX 6574945 6574984 -160075312 + Lx8 LINE L1 7443 7472 -1 1 635 260 269 21 0 chrX 6575009 6575102 -160075194 + Lx7 LINE L1 7579 7673 -23 1 635 241 289 132 58 chrX 6575368 6575489 -160074807 + MER21B LTR ERV1 589 718 -145 1 635 4325 14 0 0 chrX 6575578 6576060 -160074236 - LTRIS_Mm LTR ERV1 0 482 1 1 635 11373 36 1 13 chrX 6576060 6577495 -160072801 - MuRRS-int LTR ERV1 0 4690 3273 1 635 21289 40 7 6 chrX 6577527 6580531 -160069765 - MuRRS-int LTR ERV1 -1413 3277 1 1 635 4338 14 0 0 chrX 6580531 6581013 -160069283 - LTRIS_Mm LTR ERV1 0 482 1 1 635 445 250 99 20 chrX 6581213 6581364 -160068932 + Tigger5 DNA MER2_type 1 163 -2243 1 635 1119 69 7 0 chrX 6581479 6581624 -160068672 + B1_Mm SINE Alu 2 147 0 1 635 387 0 0 0 chrX 6581624 6581667 -160068629 + (CAAAAA)n Simple_repeat Simple_repeat 6 48 0 1 635 369 339 109 13 chrX 6582007 6582237 -160068059 + MIRb SINE MIR 6 257 -11 1 635 736 261 44 15 chrX 6582718 6582924 -160067372 - B3 SINE B2 -4 212 1 1 635 658 281 54 12 chrX 6583678 6583844 -160066452 + B3A SINE B2 6 178 -20 1 635 294 125 0 0 chrX 6583846 6583894 -160066402 + (CAGG)n Simple_repeat Simple_repeat 3 50 0 1 635 804 132 0 0 chrX 6584005 6584134 -160066162 + (GAAA)n Simple_repeat Simple_repeat 4 132 0 1 635 1090 155 91 14 chrX 6587932 6588141 -160062155 + URR1B DNA MER1_type 1 225 0 1 635 2595 141 43 5 chrX 6588216 6588657 -160061639 - Lx LINE L1 -2 6652 6195 1 635 525 316 52 17 chrX 6588866 6589040 -160061256 + MIR SINE MIR 19 198 -64 1 635 1475 266 63 13 chrX 6589054 6589672 -160060624 + L1M4 LINE L1 3341 3989 -2157 1 635 313 300 0 0 chrX 6589673 6589743 -160060553 + RSINE1 SINE B4 4 73 -92 1 635 336 111 0 0 chrX 6589835 6589889 -160060407 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 635 342 213 40 0 chrX 6589950 6590100 -160060196 + (CAGA)n Simple_repeat Simple_repeat 2 157 0 1 635 375 201 31 6 chrX 6590119 6590279 -160060017 + (CAGA)n Simple_repeat Simple_repeat 2 165 0 1 635 414 202 30 6 chrX 6590339 6590508 -160059788 + (CAGA)n Simple_repeat Simple_repeat 1 173 0 1 635 522 155 36 0 chrX 6590586 6590754 -160059542 + (CAGA)n Simple_repeat Simple_repeat 4 177 0 1 635 923 116 24 4 chrX 6590776 6591445 -160058851 + (CAGA)n Simple_repeat Simple_repeat 1 682 0 1 635 890 117 20 0 chrX 6591461 6591970 -160058326 + (CAGA)n Simple_repeat Simple_repeat 1 519 0 1 635 810 130 17 0 chrX 6591989 6592166 -160058130 + (CAGA)n Simple_repeat Simple_repeat 1 180 0 1 635 904 124 24 2 chrX 6592189 6592830 -160057466 + (CAGA)n Simple_repeat Simple_repeat 1 655 0 1 635 382 272 76 19 chrX 6592963 6593173 -160057123 + L1M4 LINE L1 3985 4206 -1940 1 635 196 102 0 39 chrX 6593200 6593251 -160057045 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 635 3186 215 54 44 chrX 6593319 6593740 -160056556 + Lx9 LINE L1 4859 5300 -547 1 635 5693 118 18 13 chrX 6593740 6594639 -160055657 + Lx2 LINE L1 6094 6996 -1 1 635 3186 238 69 46 chrX 6594639 6595497 -160054799 + Lx9 LINE L1 5301 6312 -1332 1 635 270 0 0 0 chrX 6595497 6595527 -160054769 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 635 729 275 121 60 chrX 6595527 6595792 -160054504 + Lx9 LINE L1 6313 6602 -1042 1 635 630 193 14 22 chrX 6595790 6595928 -160054368 + Lx9 LINE L1 6913 7049 -595 1 635 533 236 0 0 chrX 6596338 6596448 -160053848 + PB1D10 SINE Alu 3 112 -5 1 635 1702 210 69 108 chrX 6597686 6597867 -160052429 + RMER17B LTR ERVK 400 581 -377 1 635 315 0 0 0 chrX 6597867 6597902 -160052394 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 635 1702 210 69 108 chrX 6597902 6598302 -160051994 + RMER17B LTR ERVK 582 958 0 1 635 251 361 0 0 chrX 6598302 6598374 -160051922 + MLT1A1 LTR MaLR 276 347 -61 1 635 788 263 24 48 chrX 6598380 6598588 -160051708 + B3 SINE B2 1 203 -13 1 635 257 372 62 62 chrX 6598654 6598783 -160051513 + LTR86A1 LTR ERVL 310 438 -75 1 635 1172 55 7 0 chrX 6599008 6599153 -160051143 + B1_Mm SINE Alu 2 147 0 1 635 227 397 7 14 chrX 6599233 6599371 -160050925 + MIR SINE MIR 126 262 0 1 635 245 146 21 0 chrX 6600351 6600399 -160049897 + CT-rich Low_complexity Low_complexity 1 49 0 1 635 594 234 149 23 chrX 6601068 6601331 -160048965 + RLTR42-int LTR ERVK 1105 1400 -4122 1 635 745 237 38 142 chrX 6601351 6602028 -160048268 + RLTR42-int LTR ERVK 2023 2874 -3263 1 635 366 254 16 24 chrX 6602080 6602205 -160048091 + MYSERV6-int LTR ERVK 8549 8672 -287 1 635 441 272 41 58 chrX 6603247 6603419 -160046877 + MIRb SINE MIR 48 216 -52 1 635 21 57 0 0 chrX 6603484 6603519 -160046777 + AT_rich Low_complexity Low_complexity 1 35 0 1 635 4576 38 5 2 chrX 6604281 6604832 -160045464 + L1Md_F3 LINE L1 6018 6570 -14 1 635 1226 27 7 0 chrX 6605059 6605205 -160045091 + B1_Mm SINE Alu 1 147 0 1 635 257 68 23 0 chrX 6605205 6605249 -160045047 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 1 635 393 203 0 13 chrX 6605281 6605356 -160044940 - ID4 SINE ID -6 77 4 1 635 457 286 42 111 chrX 6605733 6605870 -160044426 - B3 SINE B2 -40 176 39 1 635 3801 92 134 14 chrX 6605870 6606490 -160043806 + Lx3B LINE L1 6277 6970 -3 1 635 457 286 42 111 chrX 6606490 6606541 -160043755 - B3 SINE B2 -178 38 1 1 635 986 229 0 5 chrX 6606547 6606736 -160043560 - B3A SINE B2 -8 190 3 1 635 396 0 0 0 chrX 6606885 6606929 -160043367 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 635 257 221 70 0 chrX 6606995 6607081 -160043215 + (TATG)n Simple_repeat Simple_repeat 1 92 0 1 635 408 324 35 32 chrX 6607164 6607302 -160042994 - B4A SINE B4 -151 141 2 1 635 248 333 43 11 chrX 6608199 6608293 -160042003 + MIRc SINE MIR 90 186 -82 1 635 1251 35 0 0 chrX 6608674 6608819 -160041477 + B1_Mm SINE Alu 1 145 -2 1 635 14949 67 123 7 chrX 6609257 6609988 -160040308 + L1VL2 LINE L1 286 1101 -2514 1 635 1107 67 0 0 chrX 6609988 6610122 -160040174 + B1_Mus1 SINE Alu 2 135 -13 1 635 542 15 0 15 chrX 6610122 6610190 -160040106 + (GAAA)n Simple_repeat Simple_repeat 4 70 0 1 635 14949 70 17 14 chrX 6610190 6612292 -160038004 + L1VL2 LINE L1 1102 3212 -403 1 635 583 280 19 39 chrX 6612361 6612517 -160037779 + B4A SINE B4 118 270 -22 1 635 305 216 63 40 chrX 6612455 6612677 -160037619 + RMER17D2 LTR ERVK 236 462 -347 1 635 214 260 209 55 chrX 6612983 6613093 -160037203 + MIRc SINE MIR 6 132 -136 1 635 276 173 160 0 chrX 6614378 6614453 -160035843 - MIR SINE MIR -98 164 78 1 635 396 336 9 0 chrX 6614936 6615043 -160035253 - PB1D10 SINE Alu -9 108 1 1 635 669 256 62 45 chrX 6615369 6615674 -160034622 + L1MDa LINE L1 1712 2014 -4619 1 635 183 80 0 0 chrX 6615674 6615699 -160034597 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 635 669 256 62 45 chrX 6615699 6615745 -160034551 + L1MDa LINE L1 2015 2069 -4564 1 635 722 202 16 31 chrX 6615772 6615900 -160034396 + B3A SINE B2 1 126 -72 1 635 470 223 28 37 chrX 6616161 6616268 -160034028 + PB1D10 SINE Alu 6 111 -6 1 635 315 315 101 0 chrX 6616454 6616603 -160033693 + L1MDa LINE L1 3687 3850 -2687 1 635 26 0 0 0 chrX 6616609 6616635 -160033661 + AT_rich Low_complexity Low_complexity 1 26 0 1 635 22 0 0 0 chrX 6616754 6616776 -160033520 + AT_rich Low_complexity Low_complexity 1 22 0 1 635 328 283 83 55 chrX 6616906 6617231 -160033065 + L1MDa LINE L1 3800 4133 -2404 1 635 311 259 192 17 chrX 6617263 6617565 -160032731 + L1MD LINE L1 3472 3826 -2320 1 635 475 212 211 6 chrX 6617615 6617781 -160032515 + L1M4 LINE L1 4243 4442 -1704 1 635 195 129 0 0 chrX 6617872 6617903 -160032393 + (A)n Simple_repeat Simple_repeat 1 31 0 1 635 206 186 0 33 chrX 6618411 6618472 -160031824 + A-rich Low_complexity Low_complexity 1 59 0 1 635 210 71 0 0 chrX 6618655 6618683 -160031613 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 1 635 210 71 0 0 chrX 6619361 6619389 -160030907 + (T)n Simple_repeat Simple_repeat 1 28 0 1 635 294 231 33 11 chrX 6619511 6619603 -160030693 - Lx9 LINE L1 -5 7639 7546 1 635 22 0 0 0 chrX 6619708 6619730 -160030566 + AT_rich Low_complexity Low_complexity 1 22 0 1 635 680 35 11 0 chrX 6619844 6619931 -160030365 + (GAAA)n Simple_repeat Simple_repeat 4 91 0 1 635 210 71 0 0 chrX 6620352 6620380 -160029916 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 635 1707 243 62 0 chrX 6620381 6620784 -160029512 - Lx9 LINE L1 -127 7517 7090 1 635 457 256 28 35 chrX 6620798 6620940 -160029356 + L1MA6 LINE L1 6138 6278 -22 1 635 524 258 82 22 chrX 6621120 6621255 -160029041 + B1_Mur2 SINE Alu 6 148 -1 1 635 2655 132 7 28 chrX 6621817 6622239 -160028057 + MTC LTR MaLR 1 413 -8 1 635 1196 78 0 0 chrX 6622369 6622510 -160027786 + B1_Mm SINE Alu 1 141 -6 1 635 309 68 0 0 chrX 6622513 6622557 -160027739 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1 635 248 28 56 0 chrX 6622906 6622942 -160027354 + (CATA)n Simple_repeat Simple_repeat 2 39 0 1 635 1458 231 52 24 chrX 6623083 6623464 -160026832 + Lx6 LINE L1 7069 7460 0 1 635 264 317 46 72 chrX 6623593 6623746 -160026550 + B1F1 SINE Alu 1 149 0 1 635 617 245 28 14 chrX 6623845 6623986 -160026310 - B1F SINE Alu -6 143 1 1 635 338 271 228 6 chrX 6624465 6624633 -160025663 - L1M2 LINE L1 -863 5277 5077 1 635 424 226 55 55 chrX 6625261 6625425 -160024871 - L1M2 LINE L1 -1085 5058 4895 1 635 1590 245 40 104 chrX 6625418 6625572 -160024724 + L1MA6 LINE L1 5338 5480 -820 1 635 5012 89 5 9 chrX 6625572 6626241 -160024055 + L1_Mus4 LINE L1 5962 6627 -9 1 635 1590 245 40 104 chrX 6626241 6626759 -160023537 + L1MA6 LINE L1 5481 5967 -333 1 635 1852 224 27 158 chrX 6626766 6627361 -160022935 + RMER1A Other Other 74 590 -440 1 635 2269 183 56 121 chrX 6627377 6628024 -160022272 + RLTR14-int LTR ERV1 274 878 -4439 1 635 181 0 69 0 chrX 6628024 6628053 -160022243 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1 635 1167 152 109 30 chrX 6628111 6628341 -160021955 + RLTR14-int LTR ERV1 1763 2010 -3307 1 635 1487 108 134 12 chrX 6628341 6628646 -160021650 + ORR1B1 LTR MaLR 1 321 -8 1 635 7964 162 46 17 chrX 6628720 6630164 -160020132 + RLTR14-int LTR ERV1 2033 3713 -3843 1 635 4463 157 122 32 chrX 6630320 6631358 -160018938 + RLTR14-int LTR ERV1 3442 4572 -745 1 635 550 168 0 50 chrX 6631630 6631749 -160018547 + RLTR42-int LTR ERVK 1870 1982 -3540 1 635 811 184 40 55 chrX 6631820 6632021 -160018275 + RLTR42-int LTR ERVK 2123 2320 -3202 1 635 304 242 0 0 chrX 6632156 6632218 -160018078 + RLTR14-int LTR ERV1 4540 4601 -716 1 635 567 147 67 19 chrX 6632213 6632317 -160017979 + RLTR14-int LTR ERV1 4887 4995 -322 1 635 611 100 9 65 chrX 6632306 6632413 -160017883 - RLTR14-int LTR ERV1 -467 4850 4750 1 635 2139 83 61 26 chrX 6632566 6632876 -160017420 - Lx3_Mus LINE L1 0 7009 6689 1 635 2651 65 56 8 chrX 6632876 6633235 -160017061 + Lx3_Mus LINE L1 6327 6702 -307 1 635 1343 149 56 5 chrX 6633956 6634171 -160016125 - URR1A DNA MER1_type 0 226 1 1 635 616 155 17 0 chrX 6635546 6635662 -160014634 + RLTR14 LTR ERV1 8 125 -257 1 635 1106 91 0 0 chrX 6635662 6635805 -160014491 + RLTR14-int LTR ERV1 1146 1288 -4029 1 635 1369 172 11 41 chrX 6635900 6636167 -160014129 + RLTR14-int LTR ERV1 1302 1560 -3757 1 635 10463 148 82 18 chrX 6636161 6638372 -160011924 + RLTR14-int LTR ERV1 2485 4835 -482 1 635 1590 153 8 0 chrX 6638372 6638633 -160011663 + RLTR14 LTR ERV1 117 379 -3 1 635 251 343 83 42 chrX 6638664 6638880 -160011416 + MER52-int LTR ERV1 5834 6058 -1033 1 635 1341 318 82 51 chrX 6640010 6640694 -160009602 + RMER15-int LTR ERVL 236 940 -4059 1 635 1274 246 28 18 chrX 6640731 6641017 -160009279 + RMER15-int LTR ERVL 1016 1304 -3695 1 635 331 281 195 63 chrX 6641017 6641207 -160009089 + B3 SINE B2 2 216 0 1 635 1291 354 44 36 chrX 6641381 6642011 -160008285 + RMER15-int LTR ERVL 1476 2110 -2889 1 635 1377 260 53 53 chrX 6642014 6642328 -160007968 - MTD LTR MaLR -1 418 100 2 635 1254 212 143 45 chrX 6642328 6642664 -160007632 + ORR1D1 LTR MaLR 5 373 -1 2 635 1377 260 53 53 chrX 6642664 6642767 -160007529 - MTD LTR MaLR -320 99 1 2 635 619 205 44 163 chrX 6643002 6643253 -160007043 + RMER15-int LTR ERVL 4745 4965 -34 1 635 292 248 25 135 chrX 6643275 6643438 -160006858 + RMER15 LTR ERVL 15 159 -416 1 635 431 343 18 24 chrX 6643437 6643607 -160006689 + RMER15 LTR ERVL 275 443 -132 1 635 2637 137 48 7 chrX 6643629 6644071 -160006225 - RLTR28 LTR ERVL -64 460 1 2 635 497 290 29 7 chrX 6644071 6644203 -160006093 + RMER15 LTR ERVL 425 559 -16 1 635 285 277 3 56 chrX 6645772 6646064 -160004232 + GA-rich Low_complexity Low_complexity 1 276 0 2 635 328 266 92 86 chrX 6646084 6646236 -160004060 + HAL1-3A_ME LINE L1 2284 2436 -422 2 635 304 299 143 43 chrX 6646225 6646365 -160003931 + HAL1-3A_ME LINE L1 2284 2437 -421 2 635 635 165 6 33 chrX 6646366 6646548 -160003748 + GA-rich Low_complexity Low_complexity 1 177 0 2 635 391 304 11 34 chrX 6646596 6646773 -160003523 + GA-rich Low_complexity Low_complexity 4 176 0 2 635 180 186 16 33 chrX 6646796 6646857 -160003439 + GA-rich Low_complexity Low_complexity 1 60 0 2 635 229 339 9 18 chrX 6647828 6647942 -160002354 + GA-rich Low_complexity Low_complexity 4 116 0 2 635 185 242 161 0 chrX 6650166 6650228 -160000068 - MIR SINE MIR -71 191 120 2 635 777 238 66 11 chrX 6651660 6651854 -159998442 + B3 SINE B2 1 187 -8 2 635 206 121 0 0 chrX 6652062 6652095 -159998201 + (CATA)n Simple_repeat Simple_repeat 4 36 0 2 635 465 122 0 0 chrX 6655060 6655134 -159995162 + (CA)n Simple_repeat Simple_repeat 1 74 0 2 635 324 102 20 0 chrX 6656001 6656050 -159994246 + HAL1-3A_ME LINE L1 1978 2027 -831 2 635 443 152 9 0 chrX 6656050 6656162 -159994134 + (CA)n Simple_repeat Simple_repeat 1 113 0 2 635 233 214 42 28 chrX 6657150 6657222 -159993074 + MIR3 SINE MIR 133 205 -3 2 635 2506 263 149 28 chrX 6657737 6658622 -159991674 - Lx8 LINE L1 -27 7446 6455 2 635 596 243 49 21 chrX 6659003 6659146 -159991150 + RSINE1 SINE B4 3 149 -16 2 635 279 0 0 0 chrX 6659158 6659189 -159991107 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 635 249 341 84 12 chrX 6659615 6659781 -159990515 - MIRb SINE MIR -76 192 15 2 635 882 145 209 5 chrX 6659828 6660015 -159990281 - URR1B DNA MER1_type 0 225 1 2 635 361 53 18 18 chrX 6660528 6660585 -159989711 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 2 635 336 197 33 0 chrX 6660676 6660737 -159989559 + tRNA-Ala-GCY_ tRNA tRNA 5 67 -8 2 635 513 307 171 18 chrX 6661005 6661280 -159989016 + L2a LINE L2 3100 3416 -10 2 635 609 272 29 12 chrX 6661528 6661766 -159988530 - MIR SINE MIR -1 267 30 2 635 763 219 44 19 chrX 6662904 6663062 -159987234 - B3A SINE B2 -36 162 1 2 635 1199 149 124 5 chrX 6663626 6663828 -159986468 + URR1A DNA MER1_type 1 226 0 2 635 377 162 104 9 chrX 6664297 6664403 -159985893 - L1MC4 LINE L1 -2 8040 7925 2 635 323 261 97 80 chrX 6664540 6664715 -159985581 - L1MC4 LINE L1 -312 7730 7553 2 635 190 204 100 20 chrX 6665126 6665176 -159985120 - MIRb SINE MIR -4 264 211 2 635 660 292 0 28 chrX 6665877 6666053 -159984243 - B3A SINE B2 -16 182 12 2 635 439 332 122 65 chrX 6666152 6666538 -159983758 - MLT2B1 LTR ERVL -57 463 56 2 635 456 320 51 67 chrX 6666820 6666848 -159983448 - L1ME3A LINE L1 -75 6098 6070 2 635 212 0 0 35 chrX 6666848 6666877 -159983419 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 2 635 456 320 51 67 chrX 6666877 6667163 -159983133 - L1ME3A LINE L1 -104 6069 5790 2 635 1243 62 0 0 chrX 6667366 6667510 -159982786 - B1_Mus1 SINE Alu 0 148 5 2 635 277 337 120 49 chrX 6667512 6667796 -159982500 + MamGypLTR1c LTR Gypsy 31 334 -469 2 635 427 344 75 42 chrX 6667934 6668174 -159982122 + MamGypLTR1c LTR Gypsy 525 772 -31 2 635 315 289 101 13 chrX 6668473 6668631 -159981665 + MER33 DNA MER1_type 27 198 -126 2 635 21 0 0 0 chrX 6668640 6668661 -159981635 + AT_rich Low_complexity Low_complexity 1 21 0 2 635 183 286 61 0 chrX 6669295 6669344 -159980952 - MIR SINE MIR -76 132 81 2 635 643 302 65 6 chrX 6669763 6669933 -159980363 + B3A SINE B2 1 180 -18 2 635 270 0 0 0 chrX 6669936 6669966 -159980330 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 635 1001 218 75 4 chrX 6670076 6670302 -159979994 + MTD LTR MaLR 1 242 -177 2 635 231 188 0 0 chrX 6670303 6670351 -159979945 + (CACG)n Simple_repeat Simple_repeat 4 51 0 2 635 387 0 0 0 chrX 6670351 6670394 -159979902 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 635 476 320 6 75 chrX 6671001 6671160 -159979136 + RSINE1 SINE B4 1 148 -17 2 635 252 0 0 0 chrX 6671173 6671201 -159979095 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 635 225 0 0 0 chrX 6671269 6671294 -159979002 + (T)n Simple_repeat Simple_repeat 1 25 0 2 635 1304 48 0 0 chrX 6671298 6671445 -159978851 - B1_Mus2 SINE Alu 0 147 1 2 635 586 233 158 0 chrX 6671996 6672116 -159978180 + RSINE1 SINE B4 6 144 -21 2 635 462 303 0 0 chrX 6672277 6672386 -159977910 + Lx8 LINE L1 7224 7332 -141 2 635 1074 133 32 48 chrX 6672644 6672833 -159977463 - B2_Mm2 SINE B2 -9 186 1 2 635 322 226 80 95 chrX 6672864 6673001 -159977295 - Lx8 LINE L1 -2 7471 7337 2 635 210 71 0 0 chrX 6673005 6673033 -159977263 + (TTCC)n Simple_repeat Simple_repeat 1 28 0 2 635 3411 283 86 10 chrX 6673033 6674109 -159976187 - Lx8 LINE L1 -54 7419 6263 2 635 14584 96 28 22 chrX 6674296 6677419 -159972877 - L1VL2 LINE L1 -627 2988 9 2 635 237 132 0 0 chrX 6677511 6677549 -159972747 + (TTCC)n Simple_repeat Simple_repeat 1 38 0 2 635 372 277 8 67 chrX 6677594 6677714 -159972582 - PB1D10 SINE Alu -3 114 2 2 635 3031 52 0 69 chrX 6677824 6678216 -159972080 + RLTR10B2 LTR ERVK 1 365 0 2 635 384 319 26 0 chrX 6678217 6678330 -159971966 + B1F SINE Alu 25 140 -9 2 635 231 61 0 0 chrX 6679216 6679249 -159971047 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 635 324 0 0 0 chrX 6679717 6679753 -159970543 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 635 1003 278 35 78 chrX 6680067 6680414 -159969882 + MLT1B LTR MaLR 1 332 -58 2 635 1460 202 133 15 chrX 6680590 6680680 -159969616 + ORR1D2 LTR MaLR 1 92 -278 2 635 324 0 0 0 chrX 6680680 6680716 -159969580 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 635 1460 202 133 15 chrX 6680716 6680956 -159969340 + ORR1D2 LTR MaLR 93 370 0 2 635 1303 225 134 26 chrX 6681455 6681797 -159968499 + Lx8 LINE L1 7095 7473 0 2 635 637 268 182 75 chrX 6681981 6682159 -159968137 - MER31A LTR ERV1 -17 468 272 2 635 792 238 0 79 chrX 6682159 6682337 -159967959 + RSINE1 SINE B4 2 165 0 2 635 637 268 182 75 chrX 6682337 6682376 -159967920 - MER31A LTR ERV1 -214 271 224 2 635 6051 55 0 15 chrX 6682376 6683101 -159967195 + L1Md_F2 LINE L1 5868 6581 -1 2 635 637 268 182 75 chrX 6683101 6683114 -159967182 - MER31A LTR ERV1 -262 223 214 2 635 1055 139 0 6 chrX 6683114 6683295 -159967001 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 635 637 268 182 75 chrX 6683295 6683473 -159966823 - MER31A LTR ERV1 -272 213 14 2 635 595 290 0 0 chrX 6683497 6683635 -159966661 - B1F SINE Alu -11 138 1 2 635 222 340 125 10 chrX 6683723 6683827 -159966469 + L2c LINE L2 3270 3385 -2 2 79 293 301 135 20 chrX 6684603 6684803 -159965493 - MLT1A0 LTR MaLR -9 553 331 2 636 404 286 9 35 chrX 6685110 6685226 -159965070 + PB1D10 SINE Alu 1 113 -4 2 636 273 280 19 39 chrX 6685232 6685336 -159964960 - MLT1K LTR MaLR -26 569 468 2 636 1570 243 178 13 chrX 6685411 6685930 -159964366 - Lx8 LINE L1 -388 7085 6481 2 636 22 35 0 0 chrX 6686103 6686132 -159964164 + AT_rich Low_complexity Low_complexity 1 29 0 2 636 380 289 19 57 chrX 6686536 6686694 -159963602 - MLT1A0 LTR MaLR -209 156 5 2 636 884 291 202 19 chrX 6686698 6687178 -159963118 - MLT1E1A LTR MaLR -112 568 1 2 636 371 220 45 20 chrX 6687632 6687773 -159962523 - L1MEg LINE L1 -4643 2459 2284 2 636 347 265 93 49 chrX 6687769 6688026 -159962270 - L1MEg LINE L1 -5213 2121 1857 2 636 504 170 183 26 chrX 6688038 6688153 -159962143 - MT2A LTR ERVL -246 287 155 2 636 1467 150 27 0 chrX 6688155 6688375 -159961921 + URR1A DNA MER1_type 1 226 0 2 636 6992 135 59 6 chrX 6688375 6689449 -159960847 - MERVL_2A-int LTR ERVL -566 5195 4065 2 636 2383 154 75 24 chrX 6689450 6689902 -159960394 + RLTR14-int LTR ERV1 2678 3152 -2165 2 636 7715 148 67 43 chrX 6689888 6690961 -159959335 + RLTR14-int LTR ERV1 3832 4875 -442 2 636 1182 70 7 0 chrX 6690961 6691104 -159959192 + B1_Mm SINE Alu 4 147 0 2 636 7715 148 67 43 chrX 6691104 6691481 -159958815 + RLTR14-int LTR ERV1 4876 5317 0 2 636 2128 135 47 19 chrX 6691509 6691782 -159958514 + RLTR14 LTR ERV1 11 291 -91 2 636 189 0 0 0 chrX 6691782 6691803 -159958493 + (CCCCCA)n Simple_repeat Simple_repeat 1 21 0 2 636 2128 135 47 19 chrX 6691803 6691891 -159958405 + RLTR14 LTR ERV1 292 381 -1 2 636 230 308 0 15 chrX 6691939 6692005 -159958291 - ID4_ SINE ID -16 67 3 2 636 886 243 65 35 chrX 6692016 6692276 -159958020 - Lx8 LINE L1 0 7473 7206 2 636 1723 254 13 2 chrX 6692269 6692664 -159957632 - Lx8 LINE L1 -546 6927 6529 2 636 634 268 146 8 chrX 6692652 6692957 -159957339 - L1M2 LINE L1 -3229 3320 2953 2 636 580 298 21 47 chrX 6692969 6693205 -159957091 - Lx8 LINE L1 -1 7472 7243 2 636 334 101 324 27 chrX 6693205 6693316 -159956980 - B2_Mm2 SINE B2 -5 190 47 2 636 1274 119 11 0 chrX 6693363 6693539 -159956757 - B2_Mm1t SINE B2 -14 179 2 2 636 1219 303 11 14 chrX 6693572 6693933 -159956363 - Lx8 LINE L1 -565 6908 6549 2 636 328 188 55 7 chrX 6694080 6694170 -159956126 + Lx9 LINE L1 6438 6501 -1143 2 636 501 306 30 13 chrX 6694210 6694443 -159955853 - L1M2 LINE L1 -3921 2628 2178 2 636 2314 152 47 0 chrX 6694458 6694821 -159955475 + RLTR14 LTR ERV1 3 382 0 2 636 280 315 110 23 chrX 6694983 6695337 -159954959 - L1M2 LINE L1 -4773 2076 1692 2 636 622 294 31 41 chrX 6695704 6695899 -159954397 + B3A SINE B2 1 193 -5 2 636 216 0 0 0 chrX 6696324 6696348 -159953948 + (A)n Simple_repeat Simple_repeat 1 24 0 2 636 427 207 0 12 chrX 6696971 6697054 -159953242 + PB1D10 SINE Alu 36 117 0 2 636 231 257 0 91 chrX 6697055 6697132 -159953164 + ID4_ SINE ID 3 72 -11 2 636 309 350 122 0 chrX 6697999 6698122 -159952174 + B1F SINE Alu 5 142 -7 2 636 252 0 0 0 chrX 6698188 6698216 -159952080 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2 636 828 191 0 0 chrX 6698216 6698352 -159951944 - B1_Mus1 SINE Alu -10 138 3 2 636 2812 219 60 31 chrX 6699236 6700040 -159950256 + L1_Mur3 LINE L1 38 864 -6848 2 636 1567 172 54 48 chrX 6700042 6700396 -159949900 - L1_Mur3 LINE L1 -3154 2726 2371 2 636 334 250 69 0 chrX 6700842 6700914 -159949382 - ID4 SINE ID -5 78 2 2 636 317 287 45 11 chrX 6701428 6701516 -159948780 - RSINE1 SINE B4 -62 103 13 3 636 333 239 0 14 chrX 6701602 6701674 -159948622 + B3A SINE B2 1 71 -127 3 636 782 305 40 53 chrX 6701675 6701997 -159948299 - RMER15 LTR ERVL 0 575 258 3 636 249 262 12 70 chrX 6702159 6702245 -159948051 + B3A SINE B2 68 148 -50 3 636 525 58 0 0 chrX 6702246 6702315 -159947981 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 636 258 203 16 33 chrX 6702332 6702393 -159947903 - L2 LINE L2 -752 2667 2608 3 636 1295 265 69 14 chrX 6702534 6702905 -159947391 + MTE2b LTR MaLR 28 405 -14 3 636 508 365 29 57 chrX 6703016 6703295 -159947001 - LTR82B Low_complexity ERVL -442 388 118 3 636 1332 237 129 14 chrX 6703402 6703766 -159946530 - MTD LTR MaLR 0 419 14 3 636 180 0 0 0 chrX 6703766 6703786 -159946510 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 636 572 166 33 25 chrX 6703988 6704104 -159946192 - PB1D10 SINE Alu -7 120 7 3 636 206 211 0 0 chrX 6704438 6704476 -159945820 + CT-rich Low_complexity Low_complexity 3 40 0 3 636 21 57 0 0 chrX 6704981 6705016 -159945280 + AT_rich Low_complexity Low_complexity 1 35 0 3 636 404 208 51 20 chrX 6705027 6705125 -159945171 + L1_Mur1 LINE L1 4493 4593 -1293 3 636 464 90 0 71 chrX 6705147 6705231 -159945065 - L1_Mus3 LINE L1 -1 6637 6560 3 636 256 336 121 0 chrX 6705277 6705417 -159944879 - RSINE1 SINE B4 -8 157 1 3 636 593 303 21 0 chrX 6706254 6706396 -159943900 + RSINE1 SINE B4 2 146 -19 3 636 1485 50 11 11 chrX 6706414 6706595 -159943701 - B2_Mm2 SINE B2 -14 181 1 3 636 1230 282 154 42 chrX 6706680 6706895 -159943401 - Lx8 LINE L1 -5 7468 7214 3 636 608 70 12 0 chrX 6706895 6706981 -159943315 + (TC)n Simple_repeat Simple_repeat 2 88 0 3 636 1230 282 154 42 chrX 6706981 6707415 -159942881 - Lx8 LINE L1 -260 7213 6747 3 636 293 274 89 52 chrX 6707696 6707831 -159942465 - MIR SINE MIR -11 257 111 3 636 408 226 31 31 chrX 6709774 6709870 -159940426 + PB1D10 SINE Alu 1 96 -21 3 636 363 283 62 23 chrX 6709936 6710066 -159940230 + B1F1 SINE Alu 14 148 -1 3 636 405 316 26 0 chrX 6710508 6710622 -159939674 + MER2B DNA MER2_type 220 336 0 3 636 1182 258 108 62 chrX 6711628 6712062 -159938234 + Lx9 LINE L1 6915 7368 -276 3 636 229 51 51 0 chrX 6712129 6712168 -159938128 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 636 31 0 0 0 chrX 6712258 6712289 -159938007 + AT_rich Low_complexity Low_complexity 1 31 0 3 636 386 330 53 92 chrX 6712293 6712500 -159937796 - MLT1J LTR MaLR -313 199 1 3 636 225 339 0 0 chrX 6713033 6713095 -159937201 - MIRm SINE MIR 0 276 215 3 636 387 193 223 16 chrX 6713095 6713216 -159937080 + Lx5 LINE L1 6877 7022 -28 3 636 257 215 200 0 chrX 6713301 6713366 -159936930 + ID4_ SINE ID 3 80 -3 3 636 2349 146 41 6 chrX 6713872 6714237 -159936059 + ORR1C1 LTR MaLR 1 378 0 3 636 524 233 0 33 chrX 6714607 6714727 -159935569 + PB1D10 SINE Alu 2 117 0 3 636 247 341 151 1 chrX 6714772 6714920 -159935376 + MIR SINE MIR 95 259 -3 3 636 397 228 58 29 chrX 6715218 6715299 -159934997 + MTD LTR MaLR 1 84 -337 3 636 1954 117 93 88 chrX 6715299 6715684 -159934612 + ORR1B1 LTR MaLR 1 387 -7 3 636 1267 171 142 32 chrX 6715686 6715995 -159934301 + MTD LTR MaLR 76 418 -1 3 636 211 94 71 54 chrX 6716178 6716234 -159934062 + CT-rich Low_complexity Low_complexity 2 58 0 3 636 504 0 0 0 chrX 6716244 6716300 -159933996 + (TC)n Simple_repeat Simple_repeat 2 57 0 3 636 417 20 0 0 chrX 6716300 6716349 -159933947 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 636 21 36 0 0 chrX 6716500 6716528 -159933768 + AT_rich Low_complexity Low_complexity 1 28 0 3 636 246 312 37 24 chrX 6716779 6716861 -159933435 - LTR85a LTR Gypsy? -263 521 439 3 636 254 239 108 54 chrX 6716984 6717077 -159933219 - LTR85a LTR Gypsy? -582 120 23 3 636 280 273 46 53 chrX 6717286 6717437 -159932859 - L1M5 LINE L1 -367 5757 5608 3 636 655 195 9 9 chrX 6718181 6718295 -159932001 - PB1D10 SINE Alu -3 114 1 3 636 217 170 0 19 chrX 6718488 6718542 -159931754 + A-rich Low_complexity Low_complexity 3 55 0 3 636 312 227 21 83 chrX 6718544 6718640 -159931656 - MLT1B LTR MaLR 0 390 301 3 636 1145 326 181 33 chrX 6718696 6719438 -159930858 + MLT1F2-int LTR MaLR 218 1068 -421 3 636 226 237 220 30 chrX 6719438 6719538 -159930758 + PB1D7 SINE Alu 2 120 0 3 636 1145 312 133 36 chrX 6719538 6719722 -159930574 + MLT1F2-int LTR MaLR 1069 1272 -217 3 636 1375 117 92 5 chrX 6719777 6719984 -159930312 - URR1B DNA MER1_type 0 225 1 3 636 402 256 49 10 chrX 6720416 6720539 -159929757 - B1_Mur1 SINE Alu 0 147 26 3 636 267 31 0 0 chrX 6720576 6720608 -159929688 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 636 241 328 0 0 chrX 6720672 6720730 -159929566 - B3A SINE B2 -84 114 57 3 636 2196 113 12 6 chrX 6720734 6721055 -159929241 - ORR1A4 LTR MaLR 0 329 7 3 636 659 61 35 0 chrX 6721094 6721208 -159929088 + (TA)n Simple_repeat Simple_repeat 2 119 0 3 636 602 251 30 6 chrX 6721230 6721394 -159928902 + MLT1F2-int LTR MaLR 1320 1487 -2 3 636 478 263 91 13 chrX 6721390 6721544 -159928752 + MLT1F2 LTR MaLR 2 167 -393 3 636 1103 333 21 33 chrX 6721584 6722003 -159928293 + MLT2D LTR ERVL 1 414 0 3 636 243 286 15 31 chrX 6722135 6722200 -159928096 - ID4_ SINE ID -5 78 15 3 636 1269 48 7 0 chrX 6722285 6722432 -159927864 - B1_Mus1 SINE Alu 0 148 1 3 636 305 329 41 41 chrX 6722580 6722726 -159927570 + B1F1 SINE Alu 4 149 0 3 636 389 321 41 12 chrX 6722886 6723056 -159927240 - MLT1C LTR MaLR -7 460 286 3 636 425 254 122 58 chrX 6723092 6723280 -159927016 - MLT1C LTR MaLR -265 202 3 3 636 276 287 34 11 chrX 6723344 6723432 -159926864 - L2 LINE L2 -545 2874 2785 3 636 187 327 26 26 chrX 6724675 6724788 -159925508 + L2b LINE L2 3258 3370 -5 3 636 479 237 34 0 chrX 6724854 6724972 -159925324 + ORR1D1 LTR MaLR 1 122 -252 3 636 981 172 44 72 chrX 6725183 6725433 -159924863 + ORR1D1 LTR MaLR 132 374 0 3 636 555 263 33 114 chrX 6725928 6726138 -159924158 - B3A SINE B2 0 198 1 3 636 191 61 30 0 chrX 6726276 6726309 -159923987 + (TTG)n Simple_repeat Simple_repeat 2 35 0 3 636 335 298 0 55 chrX 6726323 6726433 -159923863 - PB1D10 SINE Alu -11 106 3 3 636 1170 56 7 0 chrX 6726474 6726618 -159923678 - B1_Mus2 SINE Alu -2 145 1 3 636 241 232 107 24 chrX 6726807 6726891 -159923405 + MER94 DNA AcHobo 5 95 -39 3 636 804 244 34 6 chrX 6726891 6727068 -159923228 + B3A SINE B2 1 182 -16 3 636 285 273 204 0 chrX 6727150 6727238 -159923058 - PB1D10 SINE Alu -11 106 1 3 636 499 279 54 0 chrX 6727652 6727781 -159922515 + ID_B1 SINE B4 86 221 -3 3 636 1123 89 0 0 chrX 6727789 6727935 -159922361 - B1_Mus1 SINE Alu 0 148 3 3 636 504 255 61 61 chrX 6727988 6728151 -159922145 - RSINE1 SINE B4 0 165 3 3 636 586 292 26 31 chrX 6728316 6728353 -159921943 - B3A SINE B2 -8 190 158 3 636 2406 127 19 5 chrX 6728353 6728726 -159921570 + ORR1C1 LTR MaLR 1 378 0 3 636 586 292 26 31 chrX 6728726 6728879 -159921417 - B3A SINE B2 -41 157 1 3 636 246 32 0 0 chrX 6729230 6729261 -159921035 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 636 576 286 23 68 chrX 6729268 6729444 -159920852 - B3A SINE B2 -30 168 1 3 636 1320 76 43 0 chrX 6729546 6729730 -159920566 + B2_Mm1t SINE B2 2 193 0 3 636 4454 46 24 2 chrX 6729798 6730345 -159919951 + L1Md_T LINE L1 6024 6582 0 3 636 281 299 0 0 chrX 6730437 6730504 -159919792 + ID4 SINE ID 4 70 -13 3 636 246 32 0 0 chrX 6730514 6730545 -159919751 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 636 1212 194 0 14 chrX 6730614 6730828 -159919468 - B3 SINE B2 -5 211 1 3 636 708 209 102 0 chrX 6731117 6731323 -159918973 - MIRc SINE MIR -20 248 22 3 636 246 32 0 0 chrX 6732205 6732236 -159918060 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 3 636 217 190 0 23 chrX 6732756 6732799 -159917497 + GA-rich Low_complexity Low_complexity 4 45 0 3 636 26 30 0 0 chrX 6736553 6736586 -159913710 + AT_rich Low_complexity Low_complexity 1 33 0 3 636 295 246 15 0 chrX 6737698 6737763 -159912533 - ID_B1 SINE B4 -76 148 83 3 636 766 305 30 23 chrX 6737779 6738084 -159912212 + MER44A DNA MER2_type 33 339 0 3 636 288 70 0 0 chrX 6739323 6739366 -159910930 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 636 25 31 0 0 chrX 6739568 6739600 -159910696 + AT_rich Low_complexity Low_complexity 1 32 0 3 636 246 279 24 60 chrX 6739878 6739962 -159910334 + ID2 SINE ID 3 83 0 3 636 382 235 126 10 chrX 6740086 6740189 -159910107 - PB1D10 SINE Alu -1 126 12 3 636 241 284 102 31 chrX 6740106 6740204 -159910092 - B4A SINE B4 -105 187 83 3 636 304 307 120 18 chrX 6741009 6741187 -159909109 - MIRb SINE MIR -10 258 57 3 636 632 246 85 5 chrX 6741745 6741945 -159908351 - L1MA6 LINE L1 -22 6278 6063 3 636 530 278 8 0 chrX 6742037 6742163 -159908133 - RSINE1 SINE B4 -35 130 4 3 636 21 0 0 0 chrX 6743652 6743673 -159906623 + AT_rich Low_complexity Low_complexity 1 21 0 3 636 282 227 31 70 chrX 6743751 6743879 -159906417 + Lx9 LINE L1 7514 7636 -8 3 636 1135 180 138 25 chrX 6744146 6744471 -159905825 - Lx9 LINE L1 -1 7643 7282 3 636 22 0 0 0 chrX 6745744 6745766 -159904530 + AT_rich Low_complexity Low_complexity 1 22 0 3 636 703 258 12 0 chrX 6746340 6746510 -159903786 - B4 SINE B4 -13 279 97 3 636 1223 111 39 0 chrX 6746528 6746709 -159903587 + B2_Mm2 SINE B2 1 188 -7 3 636 198 0 0 0 chrX 6746971 6746993 -159903303 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3 636 1074 52 0 43 chrX 6746993 6747134 -159903162 - B1_Mus2 SINE Alu -11 136 2 4 636 472 181 0 122 chrX 6748607 6748649 -159901647 - B1_Mur1 SINE Alu -9 140 109 4 636 1067 154 8 176 chrX 6748649 6748916 -159901380 - URR1A DNA MER1_type 0 226 5 4 636 472 181 0 122 chrX 6748916 6748980 -159901316 - B1_Mur1 SINE Alu -41 108 47 4 636 290 299 11 0 chrX 6749033 6749120 -159901176 - PB1D9 SINE Alu -7 113 26 4 636 278 224 0 17 chrX 6749419 6749478 -159900818 - tRNA-Ala-GCA tRNA tRNA -16 59 2 4 636 301 302 78 23 chrX 6749520 6749649 -159900647 - ID_B1 SINE B4 -10 214 79 4 636 593 288 57 29 chrX 6749653 6749828 -159900468 - B3A SINE B2 -17 181 2 4 636 267 31 0 0 chrX 6749937 6749969 -159900327 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 4 636 566 142 45 36 chrX 6749969 6750079 -159900217 - B1_Mm SINE Alu -10 137 27 4 636 190 81 26 26 chrX 6750355 6750393 -159899903 + (TATG)n Simple_repeat Simple_repeat 3 40 0 4 636 286 304 0 0 chrX 6751045 6751124 -159899172 + ID4_ SINE ID 2 80 -3 4 636 571 299 32 0 chrX 6751295 6751452 -159898844 + RSINE1 SINE B4 4 165 0 4 636 524 309 62 62 chrX 6751487 6751680 -159898616 + B3 SINE B2 1 193 -23 4 636 200 59 0 29 chrX 6751851 6751886 -159898410 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 636 317 212 138 0 chrX 6752014 6752094 -159898202 + PB1 SINE Alu 33 123 -4 4 636 363 280 176 0 chrX 6752140 6752265 -159898031 - B1F2 SINE Alu -2 147 1 4 636 360 241 36 0 chrX 6752291 6752374 -159897922 + RSINE1 SINE B4 38 123 -42 4 636 346 79 32 0 chrX 6752374 6752437 -159897859 + (CA)n Simple_repeat Simple_repeat 1 65 0 4 636 321 89 0 0 chrX 6752437 6752482 -159897814 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 4 636 182 37 37 0 chrX 6752546 6752573 -159897723 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 636 254 253 193 0 chrX 6752573 6752656 -159897640 - ID_B1 SINE B4 -10 214 116 4 636 408 125 0 0 chrX 6752764 6752828 -159897468 + (TA)n Simple_repeat Simple_repeat 2 65 0 4 636 1077 230 0 19 chrX 6752851 6753064 -159897232 + B3 SINE B2 1 209 -7 4 636 2615 118 31 19 chrX 6753209 6753623 -159896673 - MTC LTR MaLR -1 420 2 4 636 351 0 0 0 chrX 6753739 6753778 -159896518 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 636 253 273 56 22 chrX 6753832 6754012 -159896284 - L1MA6 LINE L1 -1 6299 6114 4 636 226 277 0 44 chrX 6754015 6754083 -159896213 + ID2 SINE ID 7 71 -12 4 636 3451 30 2 0 chrX 6754500 6754895 -159895401 - MTA_Mm LTR MaLR 0 396 1 4 636 562 256 114 42 chrX 6755783 6755950 -159894346 + B3A SINE B2 2 180 -18 4 636 246 268 9 85 chrX 6756159 6756265 -159894031 + PB1D9 SINE Alu 21 118 -2 4 636 1504 171 62 7 chrX 6756586 6756875 -159893421 + Lx5 LINE L1 6743 7047 -3 4 636 303 350 28 28 chrX 6757908 6758052 -159892244 + MER58A DNA MER1_type 1 144 -80 4 636 21 36 0 0 chrX 6758267 6758295 -159892001 + AT_rich Low_complexity Low_complexity 1 28 0 4 636 371 284 64 51 chrX 6758301 6758434 -159891862 - RSINE1 SINE B4 -6 159 32 4 636 189 0 0 0 chrX 6758434 6758455 -159891841 + (CCCCCT)n Simple_repeat Simple_repeat 2 22 0 4 636 371 284 64 51 chrX 6758455 6758477 -159891819 - RSINE1 SINE B4 -134 31 3 4 636 246 352 16 0 chrX 6758630 6758758 -159891538 - MIR SINE MIR -110 152 23 4 636 559 246 0 87 chrX 6759022 6759160 -159891136 - RSINE1 SINE B4 -35 130 5 4 636 1164 96 68 0 chrX 6759303 6759480 -159890816 - B2_Mm2 SINE B2 -5 190 2 4 636 359 250 125 0 chrX 6759555 6759675 -159890621 + B1F SINE Alu 10 144 -5 4 636 830 144 31 9 chrX 6759828 6760054 -159890242 + GA-rich Low_complexity Low_complexity 1 231 0 4 636 907 117 17 12 chrX 6760057 6760230 -159890066 + (GGA)n Simple_repeat Simple_repeat 3 176 0 4 636 1315 250 76 5 chrX 6760496 6760909 -159889387 + Lx5 LINE L1 6699 7441 -19 4 636 266 106 21 0 chrX 6761531 6761578 -159888718 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 636 339 262 38 0 chrX 6761591 6761671 -159888625 - RSINE1 SINE B4 -42 123 41 4 636 598 180 160 23 chrX 6761992 6762123 -159888173 + B1_Mur4 SINE Alu 1 149 -1 4 636 200 268 0 0 chrX 6762123 6762164 -159888132 + G-rich Low_complexity Low_complexity 3 43 0 4 636 363 244 125 8 chrX 6763006 6763134 -159887162 + B1F SINE Alu 1 143 -6 4 636 204 135 0 26 chrX 6763138 6763176 -159887120 + GA-rich Low_complexity Low_complexity 4 40 0 4 636 290 318 111 9 chrX 6764267 6764375 -159885921 - PB1 SINE Alu -8 119 1 4 636 381 240 130 0 chrX 6766121 6766221 -159884075 + PB1D10 SINE Alu 5 117 0 4 636 183 42 0 0 chrX 6766224 6766248 -159884048 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 4 636 249 212 60 15 chrX 6766255 6766322 -159883974 + L1ME3A LINE L1 5852 5921 -252 4 636 281 296 102 0 chrX 6766628 6766726 -159883570 + PB1 SINE Alu 14 121 -6 4 636 228 244 185 100 chrX 6766738 6766938 -159883358 + B4A SINE B4 2 218 -74 4 636 323 182 61 0 chrX 6767085 6767151 -159883145 + ID4 SINE ID 1 70 -13 4 636 916 244 18 77 chrX 6767232 6767454 -159882842 - ID_B1 SINE B4 -15 209 1 4 636 419 345 40 34 chrX 6767519 6767696 -159882600 + ID_B1 SINE B4 2 179 -45 4 636 294 279 0 0 chrX 6767713 6767859 -159882437 + GA-rich Low_complexity Low_complexity 1 146 0 4 636 273 54 0 0 chrX 6768784 6768810 -159881486 + (T)n Simple_repeat Simple_repeat 1 26 0 4 636 1119 95 0 0 chrX 6768810 6768957 -159881339 - B1_Mus1 SINE Alu 0 148 2 4 636 273 54 0 0 chrX 6768957 6768967 -159881329 + (T)n Simple_repeat Simple_repeat 1 10 0 4 636 595 299 4 96 chrX 6772206 6772446 -159877850 + ID_B1 SINE B4 4 221 -3 4 636 312 185 19 0 chrX 6772665 6772719 -159877577 + PB1D10 SINE Alu 6 60 -57 4 636 338 217 0 55 chrX 6772895 6772968 -159877328 - ID4 SINE ID -10 73 5 4 636 748 76 0 0 chrX 6773001 6773106 -159877190 + B1_Mus1 SINE Alu 1 105 -43 4 636 260 206 13 40 chrX 6773041 6773117 -159877179 + RLTR25B LTR ERVK 441 514 -514 4 636 22 35 0 0 chrX 6773488 6773517 -159876779 + AT_rich Low_complexity Low_complexity 1 29 0 4 636 453 36 0 0 chrX 6773575 6773630 -159876666 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 636 440 319 36 0 chrX 6773675 6773889 -159876407 - Lx7 LINE L1 -239 7234 6994 4 636 226 192 0 161 chrX 6774476 6774538 -159875758 + PB1D7 SINE Alu 62 113 -7 4 636 1126 280 92 103 chrX 6774577 6775473 -159874823 + L1MCb LINE L1 3 1228 -5194 4 636 262 281 40 24 chrX 6775507 6775631 -159874665 + L1MCb LINE L1 3592 3717 -3224 4 636 350 229 229 0 chrX 6775647 6775756 -159874540 + ID_B1 SINE B4 81 214 -10 4 636 465 157 18 128 chrX 6775815 6775959 -159874337 + PB1 SINE Alu 5 149 0 4 636 257 274 0 16 chrX 6776061 6776124 -159874172 + ID4 SINE ID 18 79 -4 4 636 303 296 83 9 chrX 6776217 6776326 -159873970 + PB1D10 SINE Alu 1 117 0 4 636 475 240 36 178 chrX 6776326 6776691 -159873605 + L1MCb LINE L1 5390 5702 -1239 4 636 229 222 106 43 chrX 6776873 6776967 -159873329 - L1MC LINE L1 -1052 5094 4995 4 636 274 113 81 0 chrX 6777149 6777211 -159873085 + B2_Mm1t SINE B2 127 193 0 4 636 409 205 57 49 chrX 6777250 6777373 -159872923 + Lx9 LINE L1 7288 7411 -233 4 636 240 59 0 0 chrX 6777373 6777407 -159872889 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 636 5037 175 101 30 chrX 6777604 6779244 -159871052 + L1_Mur3 LINE L1 17 1550 -4330 4 636 477 76 0 0 chrX 6779255 6779321 -159870975 + (GA)n Simple_repeat Simple_repeat 2 67 0 4 636 5568 171 66 19 chrX 6779321 6780510 -159869786 + L1_Mur3 LINE L1 2076 3320 -2560 4 636 3069 207 27 58 chrX 6780511 6781219 -159869077 + Lx6 LINE L1 6606 7560 -136 4 636 1251 208 54 47 chrX 6781222 6781499 -159868797 + MTC LTR MaLR 89 367 -54 4 636 613 231 27 60 chrX 6781538 6781722 -159868574 + L1MC1 LINE L1 5682 5859 -474 4 636 446 329 60 0 chrX 6781737 6781886 -159868410 - RSINE1 SINE B4 0 165 8 4 636 363 149 107 2 chrX 6781900 6781975 -159868321 - PB1D10 SINE Alu 0 149 44 4 636 714 283 172 15 chrX 6782135 6782461 -159867835 + L1MC3 LINE L1 7241 7617 -168 4 636 1637 43 16 0 chrX 6782476 6782660 -159867636 + B2_Mm1a SINE B2 2 188 -5 4 636 318 302 85 0 chrX 6782809 6782938 -159867358 + B1F SINE Alu 2 141 -8 4 636 260 200 88 66 chrX 6783106 6783197 -159867099 - PB1D10 SINE Alu -3 114 22 4 636 270 0 0 0 chrX 6783597 6783627 -159866669 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 636 1118 87 0 0 chrX 6783627 6783765 -159866531 - B1_Mus2 SINE Alu -9 138 1 4 636 255 61 0 0 chrX 6784136 6784169 -159866127 + (TGGA)n Simple_repeat Simple_repeat 3 35 0 4 636 813 99 0 0 chrX 6784171 6784292 -159866004 + (GAAA)n Simple_repeat Simple_repeat 3 123 0 4 636 3080 31 8 11 chrX 6784806 6785166 -159865130 + L1Md_F3 LINE L1 6219 6577 -7 4 636 488 209 0 127 chrX 6785611 6785737 -159864559 - PB1D10 SINE Alu -7 110 1 4 636 564 276 22 7 chrX 6785805 6785940 -159864356 - B1F2 SINE Alu -9 140 4 4 636 2575 115 10 5 chrX 6785988 6786372 -159863924 - ORR1B1 LTR MaLR -8 386 1 4 636 1544 17 81 0 chrX 6786417 6786577 -159863719 + B2_Mm1a SINE B2 1 160 -33 4 636 222 37 0 0 chrX 6786577 6786604 -159863692 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 4 636 1544 17 81 0 chrX 6786604 6786617 -159863679 + B2_Mm1a SINE B2 161 186 -7 4 636 1287 99 16 0 chrX 6786652 6786834 -159863462 - B2_Mm2 SINE B2 -1 194 10 5 636 869 217 111 6 chrX 6786834 6787015 -159863281 - B3 SINE B2 -14 202 3 5 636 350 244 0 34 chrX 6787045 6787134 -159863162 - PB1D10 SINE Alu -9 108 23 5 636 1283 198 106 4 chrX 6787136 6787400 -159862896 + RMER15 LTR ERVL 283 573 -2 5 636 405 343 0 9 chrX 6787692 6787798 -159862498 + ID_B1 SINE B4 86 190 -34 5 636 200 270 30 45 chrX 6787814 6787827 -159862469 + polypurine Low_complexity Low_complexity 1 11 0 5 636 531 310 14 0 chrX 6787827 6787969 -159862327 + B1F SINE Alu 1 144 -5 5 636 200 270 30 45 chrX 6787969 6788021 -159862275 + polypurine Low_complexity Low_complexity 12 65 0 5 636 679 235 76 0 chrX 6788184 6788316 -159861980 + B1_Mur1 SINE Alu 2 143 -6 5 636 1264 189 75 178 chrX 6788472 6788883 -159861413 + ORR1D1 LTR MaLR 2 370 -4 5 636 385 287 28 42 chrX 6788909 6789051 -159861245 + L1MC LINE L1 5680 5819 -2063 5 636 813 311 47 6 chrX 6789145 6789462 -159860834 + L1ME1 LINE L1 5316 5645 -534 5 636 519 338 7 0 chrX 6789544 6789692 -159860604 + RSINE1 SINE B4 3 151 -14 5 636 234 295 51 67 chrX 6789740 6789918 -159860378 + L1ME1 LINE L1 5914 6088 -91 5 636 356 261 0 64 chrX 6790214 6790308 -159859988 + MER99 DNA hAT? 313 400 -431 5 636 786 284 24 5 chrX 6790379 6790588 -159859708 + B3 SINE B2 1 213 -3 5 636 1561 45 39 0 chrX 6790598 6790777 -159859519 + B2_Mm2 SINE B2 1 186 -9 5 636 325 203 0 0 chrX 6790894 6790958 -159859338 + MT2A LTR ERVL 5 68 -465 5 636 3705 125 76 24 chrX 6790962 6791592 -159858704 - Lx LINE L1 0 6654 5992 5 636 5410 109 44 32 chrX 6791586 6792549 -159857747 + Lx LINE L1 5010 5987 -649 5 636 2071 222 33 24 chrX 6792550 6793002 -159857294 + MT2A LTR ERVL 65 520 -13 5 636 246 289 0 72 chrX 6793418 6793515 -159856781 - L1MC4 LINE L1 -295 7700 7611 5 636 437 256 23 0 chrX 6793536 6793622 -159856674 - ID_B1 SINE B4 -43 181 94 5 636 281 269 83 23 chrX 6793708 6793841 -159856455 - L1MC4 LINE L1 -956 7086 6946 5 636 423 279 18 18 chrX 6794404 6794517 -159855779 - PB1D10 SINE Alu 0 117 5 5 636 1437 70 16 5 chrX 6794569 6794756 -159855540 + B2_Mm1t SINE B2 2 190 -3 5 636 312 307 59 0 chrX 6795208 6795309 -159854987 + PB1D10 SINE Alu 6 112 -5 5 636 1050 118 0 0 chrX 6795312 6795473 -159854823 + (GA)n Simple_repeat Simple_repeat 2 162 0 5 636 380 283 65 7 chrX 6796184 6796323 -159853973 + B1F SINE Alu 1 147 -2 5 636 269 284 0 15 chrX 6796347 6796415 -159853881 + ID4 SINE ID 17 83 0 5 636 353 196 105 0 chrX 6796456 6796589 -159853707 - Lx9 LINE L1 -16 7628 7482 5 636 461 280 103 125 chrX 6796999 6797350 -159852946 + MER2 DNA MER2_type 3 345 0 5 636 421 184 50 10 chrX 6798154 6798253 -159852043 - L1_Rod LINE L1 -3628 2219 2117 5 636 608 152 67 50 chrX 6798242 6798422 -159851874 + Lx9 LINE L1 7461 7643 -1 5 636 1634 211 30 38 chrX 6798891 6799256 -159851040 + ORR1D1 LTR MaLR 2 363 -11 5 636 16393 30 1 1 chrX 6799584 6801494 -159848802 + L1Md_T LINE L1 3676 5586 -297 5 636 9512 7 0 3 chrX 6801494 6802493 -159847803 + L1Md_T LINE L1 5587 6582 0 5 636 284 260 58 29 chrX 6802534 6802637 -159847659 + MTEa LTR MaLR 221 326 -53 5 636 380 278 93 0 chrX 6802703 6802800 -159847496 + PB1D10 SINE Alu 5 110 -7 5 636 370 141 165 31 chrX 6802818 6802972 -159847324 - B2_Mm2 SINE B2 -7 188 1 5 636 1378 69 28 17 chrX 6802972 6803149 -159847147 - B2_Mm1t SINE B2 -14 179 1 5 636 27 0 0 0 chrX 6803152 6803179 -159847117 + AT_rich Low_complexity Low_complexity 1 27 0 5 636 301 220 98 58 chrX 6803271 6803378 -159846918 + ID_B1 SINE B4 75 179 -45 5 636 245 294 126 23 chrX 6803297 6803384 -159846912 + PB1D7 SINE Alu 12 107 -13 5 636 709 262 180 102 chrX 6803388 6803579 -159846717 + Lx8 LINE L1 5198 5345 -535 5 636 1162 65 7 0 chrX 6803579 6803717 -159846579 + B1_Mm SINE Alu 1 139 -8 5 636 180 0 0 0 chrX 6803717 6803737 -159846559 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 5 636 2977 287 125 33 chrX 6803737 6805298 -159844998 + Lx8 LINE L1 5308 7043 -430 5 636 745 215 27 14 chrX 6805390 6805536 -159844760 - B1F1 SINE Alu 0 149 2 5 636 418 281 0 0 chrX 6805536 6805632 -159844664 + B1F SINE Alu 53 148 -1 5 636 306 317 152 53 chrX 6805688 6805931 -159844365 - Lx7 LINE L1 -1165 6308 6042 5 636 1074 223 25 11 chrX 6806052 6806496 -159843800 - Lx7 LINE L1 -1363 6097 5630 5 636 1579 187 33 3 chrX 6806517 6806823 -159843473 + Lx9 LINE L1 6644 6958 -686 5 636 358 98 33 0 chrX 6806823 6806884 -159843412 + Lx9 LINE L1 7575 7637 -7 5 636 564 321 28 84 chrX 6807486 6807711 -159842585 + L1MCa LINE L1 1014 1216 -5292 5 636 1157 250 23 63 chrX 6807711 6808014 -159842282 + B4A SINE B4 2 292 0 5 636 564 317 79 74 chrX 6808014 6808375 -159841921 + L1MCa LINE L1 1217 1449 -5059 5 636 250 340 29 10 chrX 6808443 6808547 -159841749 + MLT1A1 LTR MaLR 29 134 -274 5 636 287 243 27 13 chrX 6808649 6808724 -159841572 - ID4_ SINE ID 0 83 8 5 636 283 261 54 43 chrX 6808857 6808949 -159841347 + MTEa LTR MaLR 287 379 0 5 636 254 224 9 84 chrX 6808949 6809056 -159841240 + L1MCa LINE L1 3343 3441 -2880 5 636 3935 89 47 0 chrX 6809062 6809615 -159840681 - MT2B2 LTR ERVL -5 579 1 5 636 1048 252 108 74 chrX 6809615 6809641 -159840655 + L1MCa LINE L1 3452 3472 -2849 5 636 501 274 51 22 chrX 6809641 6809779 -159840517 + B1F1 SINE Alu 1 142 -7 5 636 1048 252 108 74 chrX 6809779 6809878 -159840418 + L1MCa LINE L1 3473 3554 -2767 5 636 1820 216 66 99 chrX 6809878 6810592 -159839704 - RMER6C LTR ERVK 0 690 1 5 636 1048 252 108 74 chrX 6810592 6810966 -159839330 + L1MCa LINE L1 3555 3969 -2352 5 636 317 287 97 77 chrX 6810943 6811157 -159839139 + L1MC1 LINE L1 5813 6039 -294 5 636 1271 68 0 0 chrX 6811157 6811305 -159838991 + B1_Mus1 SINE Alu 1 148 0 5 636 317 287 97 77 chrX 6811305 6811400 -159838896 + L1MC1 LINE L1 6040 6128 -205 5 636 243 238 63 0 chrX 6811442 6811505 -159838791 + B1F SINE Alu 78 144 -5 5 636 383 231 0 0 chrX 6811530 6811608 -159838688 + PB1D10 SINE Alu 38 115 -2 5 636 508 262 63 32 chrX 6811613 6811717 -159838579 + L1MC2 LINE L1 6119 6219 -125 5 636 986 55 0 15 chrX 6811717 6811847 -159838449 + L1Md_F2 LINE L1 6443 6570 -12 5 636 508 262 63 32 chrX 6811847 6811931 -159838365 + L1MC2 LINE L1 6220 6313 -31 5 636 538 228 88 0 chrX 6812031 6812145 -159838151 + B3 SINE B2 1 124 -92 5 636 244 331 28 63 chrX 6812152 6812201 -159838095 + B1F SINE Alu 13 149 0 5 636 368 269 97 0 chrX 6812201 6812294 -159838002 + ID_B1 SINE B4 123 224 0 5 636 335 252 150 10 chrX 6812486 6812586 -159837710 + PB1D7 SINE Alu 6 119 -1 5 636 234 0 0 0 chrX 6812832 6812858 -159837438 + (CAGA)n Simple_repeat Simple_repeat 3 28 0 5 636 8386 49 2 15 chrX 6813101 6814090 -159836206 + L1Md_F2 LINE L1 5597 6572 -10 5 636 204 125 0 0 chrX 6814097 6814129 -159836167 + (A)n Simple_repeat Simple_repeat 1 32 0 5 636 208 227 23 0 chrX 6814725 6814769 -159835527 + G-rich Low_complexity Low_complexity 1 45 0 5 636 207 167 0 0 chrX 6814931 6814967 -159835329 + G-rich Low_complexity Low_complexity 1 36 0 5 79 285 333 43 17 chrX 6815699 6815815 -159834481 + PB1D9 SINE Alu 2 120 0 5 637 453 294 132 18 chrX 6816526 6816692 -159833604 - MER5A DNA MER1_type -2 187 3 5 637 455 266 31 24 chrX 6816724 6816851 -159833445 + B1F SINE Alu 3 130 -19 5 637 239 324 56 19 chrX 6817369 6817476 -159832820 + L2a LINE L2 3315 3425 -1 5 637 496 237 263 40 chrX 6819454 6819652 -159830644 + B4 SINE B4 43 284 -8 5 637 456 158 0 0 chrX 6819652 6819766 -159830530 + GA-rich Low_complexity Low_complexity 1 114 0 5 637 201 220 287 10 chrX 6819940 6820041 -159830255 - MER5A DNA MER1_type -22 167 39 5 637 1707 202 18 95 chrX 6821287 6821472 -159828824 + ORR1D1 LTR MaLR 3 166 -208 5 637 578 14 14 0 chrX 6821472 6821543 -159828753 + (TC)n Simple_repeat Simple_repeat 1 72 0 5 637 1707 202 18 95 chrX 6821543 6821757 -159828539 + ORR1D1 LTR MaLR 167 371 -3 5 637 377 306 91 34 chrX 6822322 6822498 -159827798 + L2 LINE L2 2559 2744 -675 5 637 265 282 95 40 chrX 6822664 6822886 -159827410 + L1MC5 LINE L1 6641 6874 -1087 5 637 377 314 113 0 chrX 6822890 6823014 -159827282 - B1F1 SINE Alu -2 147 10 5 637 1243 276 134 30 chrX 6823021 6823761 -159826535 + L1MC5 LINE L1 6864 7680 -281 5 637 758 250 40 70 chrX 6824614 6824761 -159825535 + ID_B1 SINE B4 3 151 -73 5 637 989 135 7 0 chrX 6824761 6824902 -159825394 + B1_Mus2 SINE Alu 1 142 -5 5 637 758 250 40 70 chrX 6824902 6824982 -159825314 + ID_B1 SINE B4 152 223 -1 5 637 345 47 0 0 chrX 6825398 6825441 -159824855 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 637 246 133 0 22 chrX 6825822 6825868 -159824428 - Lx4A LINE L1 -3 7055 7011 5 637 2576 77 0 9 chrX 6825963 6826302 -159823994 - L1_Mus4 LINE L1 0 6636 6301 5 637 1500 236 53 65 chrX 6826302 6826459 -159823837 - RLTR20B1 LTR ERVK -119 444 290 5 637 2038 116 6 62 chrX 6826459 6826800 -159823496 + RLTRETN_Mm LTR ERVK 1 322 0 5 637 1500 236 53 65 chrX 6826800 6827086 -159823210 - RLTR20B1 LTR ERVK -274 289 5 5 637 198 266 76 0 chrX 6827087 6827166 -159823130 - MIR SINE MIR -49 213 129 5 637 318 312 9 18 chrX 6827222 6827336 -159822960 + PB1D10 SINE Alu 3 115 -2 5 637 516 304 57 117 chrX 6827452 6827836 -159822460 - L2 LINE L2 -688 2731 2371 5 637 970 200 12 29 chrX 6827953 6828123 -159822173 + MTEa LTR MaLR 1 167 -212 5 637 203 253 61 40 chrX 6828147 6828246 -159822050 - MIR SINE MIR -87 175 75 5 637 1607 217 27 88 chrX 6828544 6828953 -159821343 - ORR1C2 LTR MaLR 0 384 1 5 637 342 0 0 0 chrX 6829457 6829495 -159820801 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 637 396 0 0 0 chrX 6829634 6829678 -159820618 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 637 390 288 17 51 chrX 6829774 6829891 -159820405 + B1F SINE Alu 26 138 -11 5 637 756 172 6 11 chrX 6829892 6830068 -159820228 + (TAGA)n Simple_repeat Simple_repeat 3 177 0 5 637 333 241 34 6 chrX 6830070 6830245 -159820051 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 5 637 359 240 10 0 chrX 6830287 6830391 -159819905 + (TGGA)n Simple_repeat Simple_repeat 4 108 0 5 637 203 204 19 0 chrX 6830453 6830507 -159819789 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 6 637 225 309 166 40 chrX 6830949 6831124 -159819172 + MIRb SINE MIR 54 250 -18 6 637 1290 21 0 7 chrX 6831570 6831714 -159818582 + B1_Mus2 SINE Alu 1 143 -4 6 637 234 125 0 0 chrX 6831716 6831764 -159818532 + (A)n Simple_repeat Simple_repeat 1 48 0 6 637 772 344 17 24 chrX 6832461 6832750 -159817546 + B4A SINE B4 6 292 0 6 637 217 239 22 0 chrX 6832751 6832797 -159817499 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 637 237 65 0 0 chrX 6832801 6832832 -159817464 + (TA)n Simple_repeat Simple_repeat 1 31 0 6 637 384 111 0 0 chrX 6832832 6832904 -159817392 + (GA)n Simple_repeat Simple_repeat 1 72 0 6 637 299 231 24 71 chrX 6834091 6834175 -159816121 + ID4 SINE ID 2 81 -2 6 637 479 293 95 29 chrX 6834342 6834616 -159815680 + Lx9 LINE L1 7182 7473 -171 6 637 265 236 71 93 chrX 6834742 6834882 -159815414 - Lx6 LINE L1 -29 7431 7295 6 637 1035 231 10 0 chrX 6835696 6835904 -159814392 - B3 SINE B2 -6 210 1 6 637 202 270 47 16 chrX 6836280 6836344 -159813952 + L2b LINE L2 3308 3373 -2 6 637 461 244 48 40 chrX 6836381 6836505 -159813791 - B1F SINE Alu -13 136 12 6 637 286 250 196 10 chrX 6837560 6837657 -159812639 - PB1D10 SINE Alu 0 117 3 6 637 23 33 0 0 chrX 6837883 6837913 -159812383 + AT_rich Low_complexity Low_complexity 1 30 0 6 637 201 143 0 0 chrX 6838120 6838155 -159812141 + (GAAAA)n Simple_repeat Simple_repeat 3 37 0 6 637 485 285 81 11 chrX 6839522 6839696 -159810600 + MER5C DNA MER1_type 1 186 -127 6 637 839 232 239 39 chrX 6841330 6841639 -159808657 + MTEa LTR MaLR 5 375 -4 6 637 784 214 7 0 chrX 6841676 6841816 -159808480 + B1_Mur1 SINE Alu 1 141 -8 6 637 214 237 0 0 chrX 6841984 6842022 -159808274 + RSINE1 SINE B4 2 39 -126 6 637 24 32 0 0 chrX 6842404 6842435 -159807861 + AT_rich Low_complexity Low_complexity 1 31 0 6 637 607 95 286 0 chrX 6842733 6842838 -159807458 + B1_Mus1 SINE Alu 1 135 -13 6 637 405 0 0 0 chrX 6842838 6842883 -159807413 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 6 637 391 113 0 0 chrX 6843171 6843224 -159807072 + B1_Mus2 SINE Alu 79 131 -16 6 637 303 28 0 0 chrX 6843224 6843260 -159807036 + (GA)n Simple_repeat Simple_repeat 1 36 0 6 637 338 174 10 140 chrX 6843412 6843472 -159806824 - MTE2a LTR MaLR -1 378 319 6 637 731 231 10 58 chrX 6843472 6843679 -159806617 + B3A SINE B2 2 198 0 6 637 338 174 10 140 chrX 6843679 6843707 -159806589 - MTE2a LTR MaLR -61 318 303 6 637 414 0 0 0 chrX 6843707 6843753 -159806543 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 637 558 271 62 7 chrX 6843754 6843899 -159806397 - B3A SINE B2 -42 156 4 6 637 1087 245 95 29 chrX 6843925 6844240 -159806056 - MTE2a LTR MaLR -43 336 1 6 637 785 10 0 0 chrX 6845033 6845133 -159805163 - L1Md_T LINE L1 -2 6580 6481 6 637 225 65 0 0 chrX 6845392 6845423 -159804873 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 637 376 212 160 8 chrX 6845950 6846069 -159804227 + B1F1 SINE Alu 10 146 -3 6 637 376 300 82 37 chrX 6846093 6846228 -159804068 + ID_B1 SINE B4 84 224 0 6 637 929 172 0 6 chrX 6847020 6847201 -159803095 + GA-rich Low_complexity Low_complexity 1 180 0 6 637 587 129 0 0 chrX 6847633 6847726 -159802570 - BGLII_A LTR ERVK -352 93 1 6 637 3190 56 5 0 chrX 6847862 6848256 -159802040 + MTA_Mm LTR MaLR 1 396 0 6 637 2913 128 18 0 chrX 6848256 6848698 -159801598 + MTA_Mm-int LTR MaLR 3 452 -1511 6 637 1797 167 66 25 chrX 6848698 6849092 -159801204 - RMER17C LTR ERVK 0 410 1 6 637 706 124 0 17 chrX 6849092 6849207 -159801089 + MTA_Mm-int LTR MaLR 448 560 -1403 6 637 744 196 6 107 chrX 6849169 6849346 -159800950 + MT2B LTR ERVL 128 286 -315 6 637 5027 116 30 19 chrX 6849306 6850268 -159800028 + MTA_Mm-int LTR MaLR 326 1538 -425 6 637 878 57 277 0 chrX 6850268 6850409 -159799887 - B2_Mm2 SINE B2 -14 181 2 6 637 4021 123 22 111 chrX 6850409 6850506 -159799790 + MTA_Mm-int LTR MaLR 983 1057 -41 6 637 276 156 22 0 chrX 6850981 6851026 -159799270 + B3A SINE B2 10 55 -143 6 637 592 147 11 9 chrX 6851011 6851121 -159799175 - ORR1C1 LTR MaLR -258 112 1 6 637 658 315 15 25 chrX 6851236 6851438 -159798858 + B3A SINE B2 4 203 -13 6 637 248 333 28 0 chrX 6851660 6851732 -159798564 + PB1D10 SINE Alu 23 96 -21 6 637 236 200 111 28 chrX 6851738 6851846 -159798450 - RLTR40 LTR ERVK -142 675 559 6 637 274 239 28 28 chrX 6852132 6852210 -159798086 + ID4 SINE ID 12 89 -63 6 637 381 291 37 7 chrX 6852460 6852595 -159797701 + B1F1 SINE Alu 1 139 -10 6 637 242 228 69 17 chrX 6852844 6852902 -159797394 + ID SINE ID 10 70 -154 6 637 970 153 0 20 chrX 6852906 6853161 -159797135 + GA-rich Low_complexity Low_complexity 1 249 0 6 637 556 351 12 0 chrX 6853446 6853611 -159796685 - MER45A DNA Tip100 -11 167 1 6 637 243 333 0 47 chrX 6853710 6853795 -159796501 - MIR SINE MIR -149 113 33 6 637 393 22 0 0 chrX 6854032 6854078 -159796218 + (TCCA)n Simple_repeat Simple_repeat 3 48 0 6 637 257 341 64 16 chrX 6854271 6854396 -159795900 + MIRc SINE MIR 18 148 -120 6 637 315 0 0 0 chrX 6854892 6854927 -159795369 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 6 637 557 234 62 11 chrX 6855460 6855637 -159794659 - MER5A DNA MER1_type -3 186 1 6 637 1168 159 66 29 chrX 6855780 6856052 -159794244 + Lx7 LINE L1 7415 7696 0 6 637 542 191 0 9 chrX 6856094 6856200 -159794096 + B1_Mur3 SINE Alu 43 147 -2 6 637 260 264 27 27 chrX 6857305 6857379 -159792917 + MIRm SINE MIR 73 146 -130 6 637 725 240 116 23 chrX 6857621 6857961 -159792335 + L1MB7 LINE L1 5647 6004 -1991 6 637 208 326 122 37 chrX 6858071 6858259 -159792037 + MIRc SINE MIR 21 224 -44 6 637 386 288 115 60 chrX 6858469 6858687 -159791609 + L1MC4 LINE L1 7760 7989 -53 6 637 624 349 120 55 chrX 6858757 6859266 -159791030 + L1M4b LINE L1 12 553 -6781 6 637 235 226 0 0 chrX 6859359 6859412 -159790884 + L1M2 LINE L1 4105 4157 -1986 6 637 321 284 41 107 chrX 6859455 6859577 -159790719 - PB1D7 SINE Alu 0 120 7 6 637 373 283 36 78 chrX 6859588 6859895 -159790401 + L1MB8 LINE L1 4220 4513 -1633 6 637 2079 247 45 10 chrX 6859899 6860521 -159789775 + L1MB8 LINE L1 5481 6124 -54 6 637 371 326 116 0 chrX 6860522 6860651 -159789645 + B1F SINE Alu 1 144 -5 6 637 319 164 0 0 chrX 6860653 6860714 -159789582 + L1MB8 LINE L1 6112 6172 -6 6 637 513 292 116 52 chrX 6860717 6861390 -159788906 + L1M4b LINE L1 3008 3723 -3283 6 637 242 333 92 37 chrX 6861403 6861512 -159788784 + PB1D7 SINE Alu 4 118 -2 6 637 543 291 158 61 chrX 6861658 6862395 -159787901 + L1M4 LINE L1 3076 3873 -2273 6 637 1948 37 4 39 chrX 6862395 6862650 -159787646 - L1Md_F3 LINE L1 -6 6578 6333 6 637 543 291 158 61 chrX 6862650 6863032 -159787264 + L1M4 LINE L1 3874 4304 -1842 6 637 1738 204 51 27 chrX 6863056 6863465 -159786831 - MTD LTR MaLR 0 419 1 6 637 1209 149 74 9 chrX 6863574 6863693 -159786603 - Lx LINE L1 -2 6652 6536 6 637 189 0 0 0 chrX 6863693 6863714 -159786582 + (CCCA)n Simple_repeat Simple_repeat 1 21 0 6 637 1209 149 74 9 chrX 6863714 6863810 -159786486 - Lx LINE L1 -119 6535 6424 6 637 2288 74 71 6 chrX 6863810 6864162 -159786134 + Lx LINE L1 6019 6393 -261 6 637 233 296 102 97 chrX 6865002 6865073 -159785223 + MT2B LTR ERVL 89 160 -441 6 637 403 278 0 50 chrX 6865073 6865194 -159785102 + PB1D10 SINE Alu 3 117 0 6 637 318 325 0 0 chrX 6865206 6865283 -159785013 + ID4 SINE ID 7 83 0 6 637 272 326 22 11 chrX 6865283 6865296 -159785000 + ID_B1 SINE B4 7 97 -127 6 637 288 272 49 0 chrX 6866171 6866252 -159784044 + B1F SINE Alu 45 129 -20 6 637 323 200 85 24 chrX 6866287 6866369 -159783927 - LTR65 LTR ERV1 -20 649 563 6 637 255 333 12 0 chrX 6866585 6866669 -159783627 - LTR65 LTR ERV1 -505 164 80 6 637 235 347 0 0 chrX 6866857 6866929 -159783367 + L3 LINE CR1 895 966 -3523 6 637 320 171 80 62 chrX 6866963 6867075 -159783221 - Lx7 LINE L1 -21 7675 7562 6 637 768 303 71 54 chrX 6867193 6867601 -159782695 + L3 LINE CR1 964 1378 -3111 6 637 540 289 28 28 chrX 6867603 6867781 -159782515 + B3A SINE B2 3 180 -18 6 637 328 282 43 43 chrX 6867897 6868012 -159782284 + MIRb SINE MIR 13 127 -141 6 637 740 263 47 9 chrX 6868096 6868311 -159781985 + Lx8 LINE L1 7072 7294 -179 6 637 229 212 112 0 chrX 6868240 6868320 -159781976 + RMER1C Other Other 1108 1196 -146 6 637 212 240 0 0 chrX 6868436 6868486 -159781810 + (CACCAT)n Simple_repeat Simple_repeat 1 50 0 6 637 483 18 0 0 chrX 6868705 6868761 -159781535 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 637 311 235 107 25 chrX 6870291 6870413 -159779883 + L3 LINE CR1 2171 2302 -2187 6 637 265 268 0 40 chrX 6871047 6871121 -159779175 + ID4 SINE ID 2 72 -11 6 637 180 0 0 0 chrX 6871122 6871142 -159779154 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 637 401 215 0 0 chrX 6871235 6871300 -159778996 + PB1D9 SINE Alu 3 67 -53 6 637 233 266 0 132 chrX 6871300 6871326 -159778970 + MT2B2 LTR ERVL 167 245 -339 6 637 236 305 24 89 chrX 6871471 6871640 -159778656 + L1MD2 LINE L1 6187 6344 -15 6 637 744 204 14 7 chrX 6871663 6871801 -159778495 - B1_Mur1 SINE Alu -1 148 10 6 637 507 294 72 0 chrX 6872111 6872264 -159778032 + ID_B1 SINE B4 1 164 -60 6 637 500 250 18 9 chrX 6872326 6872439 -159777857 + PB1D9 SINE Alu 2 115 -5 6 637 442 229 57 9 chrX 6872545 6872651 -159777645 - PB1D10 SINE Alu -5 112 2 6 637 234 0 0 0 chrX 6872657 6872683 -159777613 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 637 694 241 20 7 chrX 6872805 6872951 -159777345 + ID_B1 SINE B4 77 224 0 6 637 435 279 29 14 chrX 6873149 6873287 -159777009 - B1F SINE Alu -9 140 1 6 637 553 294 20 56 chrX 6873465 6873660 -159776636 - MIRb SINE MIR -51 217 30 6 637 1073 236 172 12 chrX 6873965 6874315 -159775981 + MTE2a LTR MaLR 11 419 0 7 637 542 203 127 0 chrX 6874572 6874690 -159775606 + ID_B1 SINE B4 86 218 -6 7 637 610 250 72 62 chrX 6875067 6875276 -159775020 - B3 SINE B2 -5 211 1 7 637 225 286 114 0 chrX 6875328 6875433 -159774863 + PB1D10 SINE Alu 1 117 0 7 637 266 364 62 26 chrX 6875545 6875658 -159774638 + LTR79 LTR ERVL 40 156 -371 7 637 367 243 22 0 chrX 6875734 6875828 -159774468 + B1_Mur1 SINE Alu 39 148 -1 7 637 196 346 188 27 chrX 6876179 6876402 -159773894 + L2b LINE L2 3099 3357 -18 7 637 687 252 90 8 chrX 6876639 6876883 -159773413 - MER33 DNA MER1_type 0 324 61 7 637 197 316 152 36 chrX 6876888 6877026 -159773270 + MIR SINE MIR 72 225 -37 7 637 522 198 18 0 chrX 6877026 6877137 -159773159 + RSINE1 SINE B4 2 114 -51 7 637 252 0 0 0 chrX 6877139 6877167 -159773129 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 637 1096 119 25 61 chrX 6877547 6877743 -159772553 - B2_Mm2 SINE B2 -3 192 4 7 637 544 291 77 48 chrX 6878419 6878628 -159771668 - MER20 DNA MER1_type -3 216 2 7 637 23 0 0 0 chrX 6878725 6878748 -159771548 + AT_rich Low_complexity Low_complexity 1 23 0 7 637 206 156 0 22 chrX 6879329 6879375 -159770921 + A-rich Low_complexity Low_complexity 3 47 0 7 637 438 20 0 0 chrX 6879501 6879552 -159770744 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 637 1119 62 7 0 chrX 6879552 6879698 -159770598 - B1_Mus1 SINE Alu 0 148 2 7 637 277 279 100 9 chrX 6880301 6880411 -159769885 + MIR SINE MIR 159 268 0 7 637 523 237 127 0 chrX 6880728 6880846 -159769450 - ID_B1 SINE B4 -8 216 84 7 637 3583 60 2 0 chrX 6881387 6881872 -159768424 + L1_Mus1 LINE L1 4985 5470 -413 7 637 6330 50 44 12 chrX 6881886 6882742 -159767554 + L1_Mus1 LINE L1 5684 6567 0 7 637 436 169 0 53 chrX 6883229 6883304 -159766992 + ID4_ SINE ID 2 72 -11 7 637 258 270 41 57 chrX 6883398 6883428 -159766868 - YREP_Mm Unknown Unknown -1450 362 246 7 637 306 288 34 101 chrX 6883428 6883448 -159766848 + B4A SINE B4 75 88 -204 7 637 354 294 137 0 chrX 6883448 6883550 -159766746 + PB1D10 SINE Alu 1 116 -1 7 637 268 200 25 0 chrX 6883627 6883707 -159766589 + (TA)n Simple_repeat Simple_repeat 1 82 0 7 637 351 0 0 0 chrX 6883760 6883799 -159766497 + (TA)n Simple_repeat Simple_repeat 1 39 0 7 637 230 0 0 103 chrX 6883978 6884017 -159766279 + (G)n Simple_repeat Simple_repeat 1 35 0 7 637 1060 82 0 39 chrX 6884265 6884418 -159765878 - B1_Mus1 SINE Alu -1 147 1 7 637 185 0 0 39 chrX 6885226 6885252 -159765044 + (TTG)n Simple_repeat Simple_repeat 1 25 0 7 637 310 296 0 65 chrX 6885665 6885788 -159764508 + PB1D10 SINE Alu 3 117 0 7 637 234 254 0 113 chrX 6885798 6885869 -159764427 + ID4_ SINE ID 5 67 -16 7 637 417 39 0 0 chrX 6885879 6885930 -159764366 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 637 250 339 178 0 chrX 6886013 6886131 -159764165 + MIR3 SINE MIR 41 179 -29 7 637 21 0 0 0 chrX 6886262 6886283 -159764013 + AT_rich Low_complexity Low_complexity 1 21 0 7 637 526 237 26 116 chrX 6886324 6886558 -159763738 - MIR SINE MIR -37 225 21 7 637 21 0 0 0 chrX 6886813 6886834 -159763462 + AT_rich Low_complexity Low_complexity 1 21 0 7 637 421 241 11 0 chrX 6887771 6887858 -159762438 - PB1D10 SINE Alu -6 111 24 7 637 338 363 0 0 chrX 6887787 6887889 -159762407 - ID_B1 SINE B4 -49 175 74 7 637 356 239 165 33 chrX 6888076 6888167 -159762129 - PB1D10 SINE Alu 0 117 15 7 637 433 323 7 89 chrX 6888119 6888265 -159762031 - ID_B1 SINE B4 -81 143 10 7 637 632 219 86 14 chrX 6888310 6888449 -159761847 - B1F SINE Alu 0 149 1 7 637 308 206 34 171 chrX 6888618 6888710 -159761586 - MER5B DNA MER1_type -1 177 101 7 637 629 214 82 30 chrX 6888710 6888845 -159761451 - B1_Mur1 SINE Alu -5 144 3 7 637 308 206 34 171 chrX 6888845 6888869 -159761427 - MER5B DNA MER1_type -78 100 77 7 637 315 0 0 0 chrX 6888871 6888906 -159761390 + (TTTTA)n Simple_repeat Simple_repeat 5 39 0 7 637 1010 195 51 35 chrX 6888906 6889103 -159761193 - B3 SINE B2 -16 200 1 7 637 241 246 0 28 chrX 6889406 6889477 -159760819 - L1M5 LINE L1 -410 5714 5646 7 637 607 171 0 19 chrX 6889488 6889597 -159760699 + B1_Mus2 SINE Alu 33 140 -7 7 637 297 0 0 0 chrX 6889598 6889631 -159760665 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 637 279 0 0 0 chrX 6889631 6889661 -159760635 + (GA)n Simple_repeat Simple_repeat 2 32 0 7 637 300 319 65 40 chrX 6889719 6889918 -159760378 - L1M5 LINE L1 -571 5553 5350 7 637 223 340 32 11 chrX 6890493 6890588 -159759708 + L2a LINE L2 3310 3406 -20 7 637 358 310 32 6 chrX 6891349 6891506 -159758790 - MIR SINE MIR -66 196 40 7 637 238 340 117 51 chrX 6892068 6892341 -159757955 + L2b LINE L2 2666 2956 -463 7 637 218 295 38 13 chrX 6892374 6892453 -159757843 + L2b LINE L2 3047 3127 -248 7 637 731 229 0 40 chrX 6892641 6892652 -159757644 - RSINE1 SINE B4 -15 150 141 7 637 360 64 0 0 chrX 6892652 6892699 -159757597 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 637 731 229 0 40 chrX 6892699 6892837 -159757459 - RSINE1 SINE B4 -25 140 7 7 637 411 21 0 0 chrX 6894748 6894796 -159755500 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 637 418 280 62 31 chrX 6896763 6896925 -159753371 - MIRb SINE MIR -20 248 82 7 637 375 275 156 0 chrX 6897052 6897161 -159753135 + ID_B1 SINE B4 92 217 -7 7 637 344 244 197 57 chrX 6897161 6897174 -159753122 + B1F1 SINE Alu 11 149 0 7 637 192 244 0 0 chrX 6897182 6897223 -159753073 - MIRb SINE MIR -193 75 35 7 637 693 232 28 0 chrX 6897396 6897538 -159752758 - B1_Mur2 SINE Alu 0 149 4 7 637 2551 246 151 37 chrX 6897544 6898387 -159751909 - Lx8 LINE L1 0 7473 6535 7 637 634 309 95 64 chrX 6898578 6898924 -159751372 - LTR65 LTR ERV1 -145 524 168 7 637 459 15 0 42 chrX 6899258 6899329 -159750967 + (GTTTG)n Simple_repeat Simple_repeat 2 69 0 7 637 540 0 0 0 chrX 6899681 6899741 -159750555 + (CA)n Simple_repeat Simple_repeat 1 60 0 7 637 225 154 0 0 chrX 6899858 6899897 -159750399 + CT-rich Low_complexity Low_complexity 2 40 0 7 637 215 231 0 0 chrX 6899981 6900020 -159750276 + (ATGGTG)n Simple_repeat Simple_repeat 6 44 0 7 637 375 279 0 0 chrX 6900162 6900248 -159750048 + PB1D10 SINE Alu 9 94 -23 7 637 1027 274 38 57 chrX 6900289 6900707 -159749589 + Lx8 LINE L1 7047 7456 -17 7 637 246 306 0 0 chrX 6901069 6901141 -159749155 - L5 LINE RTE -358 1907 1836 7 637 874 261 100 73 chrX 6901146 6901435 -159748861 + RCHARR1 DNA MER1_type 3 299 -675 7 637 393 22 0 0 chrX 6901454 6901500 -159748796 + (TCTCCC)n Simple_repeat Simple_repeat 1 46 0 7 637 309 242 202 0 chrX 6901500 6901599 -159748697 - HAL1-3A_ME LINE L1 -746 2112 1994 7 637 369 0 0 0 chrX 6901599 6901640 -159748656 + (GA)n Simple_repeat Simple_repeat 1 41 0 7 637 642 356 72 48 chrX 6901752 6902277 -159748019 - L2 LINE L2 -350 3069 2532 7 637 264 257 68 57 chrX 6902405 6902582 -159747714 + L1MDa LINE L1 1097 1275 -5358 7 637 871 219 22 6 chrX 6902683 6902862 -159747434 + B3 SINE B2 25 206 -10 7 637 252 0 0 0 chrX 6902939 6902967 -159747329 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 637 399 326 62 28 chrX 6902992 6903137 -159747159 - RSINE1 SINE B4 -12 153 4 7 637 523 275 97 34 chrX 6903137 6903344 -159746952 + L1MD2 LINE L1 5922 6141 -218 7 637 1314 296 136 52 chrX 6903497 6904137 -159746159 - L2 LINE L2 -1483 1936 1243 7 637 286 285 139 0 chrX 6904137 6904295 -159746001 - L2 LINE L2 -2490 929 750 7 637 400 290 0 36 chrX 6904340 6904451 -159745845 - PB1D7 SINE Alu -1 119 13 7 637 530 215 80 15 chrX 6904841 6904978 -159745318 + L1MA6 LINE L1 6122 6267 -33 7 637 22 0 0 0 chrX 6905026 6905048 -159745248 + AT_rich Low_complexity Low_complexity 1 22 0 7 637 621 297 19 25 chrX 6905056 6905218 -159745078 - RSINE1 SINE B4 0 165 5 7 637 4750 178 89 24 chrX 6905302 6906500 -159743796 + Lx6 LINE L1 48 1322 -6406 7 637 4276 179 49 19 chrX 6906496 6907394 -159742902 + Lx6 LINE L1 4588 5512 -368 7 637 2677 216 88 19 chrX 6907420 6908047 -159742249 + Lx6 LINE L1 5855 6524 -936 7 637 1934 221 35 37 chrX 6908072 6908557 -159741739 + RLTR20C LTR ERVK 51 534 0 7 637 3498 198 53 29 chrX 6908557 6909023 -159741273 + Lx6 LINE L1 6544 7015 -445 7 637 279 0 0 0 chrX 6909023 6909054 -159741242 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 7 637 3498 198 57 27 chrX 6909054 6909345 -159740951 + Lx6 LINE L1 7016 7576 -120 7 637 198 0 0 0 chrX 6909345 6909367 -159740929 + (TGAA)n Simple_repeat Simple_repeat 3 24 0 7 637 180 179 0 0 chrX 6909462 6909501 -159740795 + (TTGG)n Simple_repeat Simple_repeat 1 39 0 7 637 387 0 0 0 chrX 6909502 6909545 -159740751 + (TC)n Simple_repeat Simple_repeat 2 44 0 7 637 339 85 0 0 chrX 6909545 6909591 -159740705 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 637 3705 20 2 0 chrX 6909599 6909992 -159740304 + MTA_Mm LTR MaLR 2 395 -1 7 637 386 250 80 0 chrX 6910004 6910104 -159740192 + MT2B LTR ERVL 6 113 -420 7 637 482 152 54 11 chrX 6910104 6910197 -159740099 - RLTR11A LTR ERVK 0 528 432 7 637 1741 173 56 18 chrX 6910195 6910537 -159739759 + RLTR11A LTR ERVK 173 527 -1 7 637 2490 243 5 37 chrX 6910544 6911105 -159739191 - Lx6 LINE L1 -6 7454 6912 7 637 953 227 130 42 chrX 6911168 6911540 -159738756 + MT2B LTR ERVL 65 601 0 7 637 6113 163 52 3 chrX 6911540 6912575 -159737721 + MERVL_2A-int LTR ERVL 1 1086 -4675 7 637 2613 149 27 13 chrX 6912575 6913025 -159737271 - MT2C_Mm LTR ERVL 0 475 20 7 637 28439 131 49 9 chrX 6913026 6914897 -159735399 + MERVL_2A-int LTR ERVL 1084 2992 -2769 7 637 684 0 0 0 chrX 6914897 6914973 -159735323 + (GA)n Simple_repeat Simple_repeat 1 76 0 7 637 28439 131 49 9 chrX 6914973 6915357 -159734939 + MERVL_2A-int LTR ERVL 2993 3430 -2331 7 637 4750 157 115 19 chrX 6915357 6916180 -159734116 + RMER19B LTR ERVK 1 902 0 7 637 28439 131 49 9 chrX 6916180 6918171 -159732125 + MERVL_2A-int LTR ERVL 3431 5515 -246 7 637 2564 84 8 28 chrX 6918171 6918525 -159731771 - L1_Mus3 LINE L1 0 6638 6292 7 637 28439 131 49 9 chrX 6918525 6918649 -159731647 + MERVL_2A-int LTR ERVL 5516 5631 -130 7 637 314 149 0 51 chrX 6918661 6918739 -159731557 + ORR1A3-int LTR MaLR 583 656 -1307 7 637 718 253 110 66 chrX 6918777 6919203 -159731093 + MT2B LTR ERVL 1 507 -94 7 637 953 176 0 0 chrX 6919203 6919351 -159730945 + B1_Mus1 SINE Alu 1 148 0 7 637 233 125 75 0 chrX 6919364 6919404 -159730892 + MT2A LTR ERVL 420 462 -71 8 637 44 20 0 0 chrX 6919557 6919608 -159730688 + AT_rich Low_complexity Low_complexity 1 51 0 8 637 381 302 83 23 chrX 6919609 6919911 -159730385 + L1MA9 LINE L1 5938 6257 -55 8 637 563 213 0 31 chrX 6919922 6920019 -159730277 - Lx5 LINE L1 -171 6879 6786 8 637 28 29 0 0 chrX 6920063 6920098 -159730198 + AT_rich Low_complexity Low_complexity 1 35 0 8 637 317 155 17 17 chrX 6920114 6920173 -159730123 + L1MA9 LINE L1 5823 5881 -431 8 637 360 111 0 0 chrX 6920278 6920332 -159729964 + (TG)n Simple_repeat Simple_repeat 2 55 0 8 637 622 268 0 0 chrX 6920335 6920473 -159729823 - B3A SINE B2 -59 139 2 8 637 376 268 60 47 chrX 6920759 6920908 -159729388 - L1MA4 LINE L1 -368 5932 5782 8 637 287 252 0 10 chrX 6920908 6920957 -159729339 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 8 637 1697 169 76 71 chrX 6920957 6921339 -159728957 - ORR1C2 LTR MaLR 0 384 1 8 637 287 252 0 10 chrX 6921339 6921393 -159728903 + (TATATG)n Simple_repeat Simple_repeat 3 55 0 8 637 417 20 0 0 chrX 6921435 6921485 -159728811 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 8 637 225 94 0 0 chrX 6921487 6921519 -159728777 + (TA)n Simple_repeat Simple_repeat 1 32 0 8 637 830 346 61 54 chrX 6921534 6922028 -159728268 + L2a LINE L2 2388 2888 -531 8 637 260 329 0 12 chrX 6922028 6922111 -159728185 + ID4_ SINE ID 1 82 -1 8 637 830 311 64 66 chrX 6922111 6922355 -159727941 + L2a LINE L2 2889 3127 -299 8 637 630 39 0 0 chrX 6922527 6922604 -159727692 + (TAGA)n Simple_repeat Simple_repeat 2 78 0 8 637 615 247 187 0 chrX 6922675 6922857 -159727439 - B3 SINE B2 0 216 1 8 637 215 109 35 52 chrX 6922907 6922965 -159727331 + (TA)n Simple_repeat Simple_repeat 1 57 0 8 637 1204 75 0 20 chrX 6922973 6923123 -159727173 - B1_Mus1 SINE Alu 0 148 2 8 637 22 35 0 0 chrX 6923143 6923172 -159727124 + AT_rich Low_complexity Low_complexity 1 29 0 8 637 1474 209 159 23 chrX 6923194 6923546 -159726750 - MTD LTR MaLR 0 419 20 8 637 499 204 77 10 chrX 6923613 6923717 -159726579 + PB1D7 SINE Alu 1 111 -9 8 637 2459 220 181 19 chrX 6923903 6924122 -159726174 - Lx9 LINE L1 -736 6908 6667 8 637 2431 77 195 6 chrX 6924122 6924476 -159725820 + BGLII LTR ERVK 1 421 0 8 637 2459 226 85 18 chrX 6924476 6925595 -159724701 - Lx9 LINE L1 -978 6666 5295 8 637 6917 107 56 16 chrX 6925599 6926622 -159723674 - Lx3A LINE L1 -7 6974 5911 8 637 2512 90 11 0 chrX 6926622 6926976 -159723320 + L1_Mur1 LINE L1 2637 2994 -2892 8 637 304 136 0 181 chrX 6926976 6927048 -159723248 + MTC LTR MaLR 355 413 -8 8 637 219 286 0 0 chrX 6927052 6927101 -159723195 + polypyrimidine Low_complexity Low_complexity 4 52 0 8 637 180 0 0 0 chrX 6927201 6927221 -159723075 + (TG)n Simple_repeat Simple_repeat 1 20 0 8 637 1127 111 0 5 chrX 6927221 6927431 -159722865 + (GA)n Simple_repeat Simple_repeat 1 208 0 8 637 430 190 58 29 chrX 6927440 6927543 -159722753 - L1MA9 LINE L1 -157 6155 6050 8 637 261 276 129 8 chrX 6927597 6927721 -159722575 - L1MEc LINE L1 -6193 207 69 8 637 621 40 0 0 chrX 6927821 6927897 -159722399 + (TTTTC)n Simple_repeat Simple_repeat 4 79 0 8 637 1210 78 0 0 chrX 6927899 6928040 -159722256 - B1_Mus1 SINE Alu -6 142 2 8 637 903 284 9 5 chrX 6928265 6928484 -159721812 + ID_B1 SINE B4 3 222 -2 8 637 441 260 30 45 chrX 6928579 6928712 -159721584 + L1MD2 LINE L1 27 157 -6390 8 637 527 265 76 11 chrX 6928785 6929060 -159721236 + L1MD2 LINE L1 4846 5138 -1406 8 637 802 290 107 47 chrX 6929060 6929378 -159720918 + ORR1E LTR MaLR 6 342 -17 8 637 680 0 0 12 chrX 6929379 6929460 -159720836 + (GAAA)n Simple_repeat Simple_repeat 4 83 0 8 637 588 232 55 22 chrX 6929461 6929642 -159720654 + L1MC LINE L1 4740 4926 -1220 8 637 752 128 0 0 chrX 6929651 6929760 -159720536 - B2_Mm2 SINE B2 -83 112 4 8 637 1511 139 24 32 chrX 6929803 6930055 -159720241 - Lx7 LINE L1 -685 7011 6762 8 637 583 276 177 30 chrX 6930071 6930303 -159719993 + Lx6 LINE L1 7022 7287 -173 8 637 269 297 9 9 chrX 6930319 6930431 -159719865 + L1MD2 LINE L1 5346 5457 -1087 8 637 301 342 45 25 chrX 6930475 6930676 -159719620 + L1MD2 LINE L1 5557 5761 -783 8 637 1039 267 137 27 chrX 6930686 6931240 -159719056 + L1ME1 LINE L1 5442 6056 -1986 8 637 219 227 0 43 chrX 6931251 6931297 -159718999 + B1F1 SINE Alu 13 56 -93 8 637 1246 55 7 0 chrX 6931308 6931454 -159718842 + B1_Mm SINE Alu 1 147 0 8 637 243 173 0 0 chrX 6931456 6931508 -159718788 + A-rich Low_complexity Low_complexity 1 52 0 8 637 195 196 38 29 chrX 6931556 6931661 -159718635 + GA-rich Low_complexity Low_complexity 3 108 0 8 637 920 247 66 37 chrX 6931781 6932130 -159718166 - Charlie1b DNA MER1_type -45 478 120 8 637 1374 150 112 19 chrX 6932856 6933115 -159717181 - ORR1B2 LTR MaLR 0 367 85 8 637 1043 213 47 25 chrX 6933112 6933335 -159716961 + ORR1D2 LTR MaLR 130 363 -7 8 637 3379 59 2 15 chrX 6933335 6933747 -159716549 - MTB_Mm LTR MaLR 0 407 1 8 637 1043 213 47 25 chrX 6933747 6933759 -159716537 + ORR1D2 LTR MaLR 364 370 0 8 637 485 261 20 85 chrX 6933761 6933962 -159716334 + MER97c DNA MER1_type? 9 196 -894 8 637 315 340 62 0 chrX 6934251 6934348 -159715948 + L2a LINE L2 3293 3395 -31 8 637 251 240 134 10 chrX 6934619 6934716 -159715580 + MamGypLTR1c LTR Gypsy 695 803 0 8 637 331 253 171 0 chrX 6934799 6934945 -159715351 - L1MC4a LINE L1 -1990 5892 5722 8 637 2168 168 150 51 chrX 6935096 6935609 -159714687 + RMER4B LTR ERVK 22 585 0 8 637 266 183 83 0 chrX 6935610 6935670 -159714626 - PB1D7 SINE Alu -17 103 39 8 637 885 99 283 0 chrX 6935673 6935693 -159714603 - B2_Mm2 SINE B2 0 195 176 8 637 252 0 0 0 chrX 6935693 6935721 -159714575 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 8 637 885 99 283 0 chrX 6935721 6935852 -159714444 - B2_Mm2 SINE B2 -20 175 2 8 637 240 35 0 0 chrX 6935863 6935892 -159714404 + (T)n Simple_repeat Simple_repeat 1 29 0 8 637 5332 117 69 81 chrX 6935913 6936890 -159713406 - L1_Mus3 LINE L1 0 6638 5674 8 637 262 279 44 55 chrX 6936890 6936927 -159713369 - ID_B1 SINE B4 -51 173 84 8 637 299 241 0 0 chrX 6936927 6936981 -159713315 - B1F1 SINE Alu -93 56 3 8 637 184 315 26 32 chrX 6937002 6937107 -159713189 - MIRb SINE MIR -22 246 137 8 637 531 0 0 0 chrX 6937240 6937299 -159712997 + (TG)n Simple_repeat Simple_repeat 2 60 0 8 637 1015 219 10 0 chrX 6937307 6937499 -159712797 - B3 SINE B2 -20 196 3 8 637 1268 281 44 3 chrX 6937552 6937941 -159712355 - L1MB7 LINE L1 -273 5911 5507 8 637 411 293 24 0 chrX 6938116 6938239 -159712057 - L1M3 LINE L1 -2300 3840 3715 8 637 1488 113 87 12 chrX 6938241 6938483 -159711813 - RMER1A Other Other -1 1029 770 8 637 393 310 88 34 chrX 6938525 6938729 -159711567 - L1MCb LINE L1 -5031 1720 1506 8 637 439 298 84 42 chrX 6938780 6939067 -159711229 - L1MCb LINE L1 -5189 856 558 8 637 1238 148 24 45 chrX 6939365 6939610 -159710686 + MTD LTR MaLR 3 218 -189 8 637 5910 145 13 1 chrX 6939610 6940528 -159709768 + Lx LINE L1 5713 6641 -13 8 637 397 122 134 0 chrX 6940537 6940556 -159709740 + MTD LTR MaLR 196 215 -206 8 637 197 65 0 31 chrX 6940556 6940588 -159709708 + (CAAG)n Simple_repeat Simple_repeat 3 33 0 8 637 397 122 134 0 chrX 6940588 6940612 -159709684 + MTD LTR MaLR 216 239 -182 8 637 423 0 0 0 chrX 6940612 6940659 -159709637 + (CA)n Simple_repeat Simple_repeat 1 47 0 8 637 397 122 134 0 chrX 6940659 6940696 -159709600 + MTD LTR MaLR 240 286 -135 8 637 387 297 52 101 chrX 6940783 6941131 -159709165 - L1MCb LINE L1 -5714 331 1 8 637 705 212 10 31 chrX 6942256 6942434 -159707862 + B3 SINE B2 7 174 -19 8 637 222 118 0 0 chrX 6942502 6942536 -159707760 + (TAG)n Simple_repeat Simple_repeat 1 34 0 8 637 345 329 65 31 chrX 6942676 6942936 -159707360 - L1MEe LINE L1 -3904 950 682 8 637 388 278 139 0 chrX 6944099 6944243 -159706053 - ID_B1 SINE B4 0 224 61 8 637 375 270 0 20 chrX 6944223 6944325 -159705971 - PB1 SINE Alu 0 127 28 8 637 246 250 190 38 chrX 6944704 6944862 -159705434 - Lx9 LINE L1 -74 7570 7389 8 637 320 171 134 62 chrX 6945796 6945908 -159704388 - Charlie15a DNA MER1_type 0 224 105 8 637 240 258 45 0 chrX 6946033 6946099 -159704197 + MER5A DNA MER1_type 1 69 -120 8 637 310 273 82 0 chrX 6946505 6946615 -159703681 + L1ME3A LINE L1 6036 6154 -19 8 638 384 286 176 40 chrX 6947855 6948077 -159702219 + L1MC4 LINE L1 7505 7774 -268 8 638 1169 70 0 0 chrX 6948077 6948219 -159702077 + B1_Mus1 SINE Alu 2 143 -5 8 638 384 286 176 40 chrX 6948219 6948469 -159701827 + L1MC4 LINE L1 7775 8041 -1 8 638 207 0 0 0 chrX 6948671 6948694 -159701602 + (A)n Simple_repeat Simple_repeat 1 23 0 8 638 360 0 0 0 chrX 6948777 6948817 -159701479 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 8 638 188 326 19 93 chrX 6948819 6948927 -159701369 - L2b LINE L2 -15 3360 3261 8 638 366 172 12 0 chrX 6948936 6949016 -159701280 + ID4_ SINE ID 7 90 -62 8 638 368 277 75 25 chrX 6949734 6949893 -159700403 - MIRb SINE MIR -16 252 86 8 638 300 91 0 0 chrX 6949904 6949948 -159700348 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 638 247 307 7 20 chrX 6952316 6952469 -159697827 + G-rich Low_complexity Low_complexity 6 156 0 8 638 351 268 0 0 chrX 6952600 6952779 -159697517 + (TTCGGG)n Simple_repeat Simple_repeat 1 179 0 8 638 389 285 0 7 chrX 6952888 6953026 -159697270 + CT-rich Low_complexity Low_complexity 2 138 0 8 638 317 320 11 50 chrX 6953246 6953427 -159696869 - MER5A DNA MER1_type 0 189 16 8 638 282 116 0 0 chrX 6955130 6955173 -159695123 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 8 638 743 282 82 7 chrX 6955531 6955824 -159694472 - Charlie2b DNA MER1_type -27 2755 2441 8 638 918 273 76 9 chrX 6955889 6956218 -159694078 - Charlie2b DNA MER1_type -655 2127 1777 8 638 725 219 57 53 chrX 6956236 6956463 -159693833 - Charlie2b DNA MER1_type -2473 309 82 8 638 369 0 0 0 chrX 6956540 6956581 -159693715 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 638 351 0 0 0 chrX 6956581 6956619 -159693677 + (GA)n Simple_repeat Simple_repeat 1 39 0 8 638 228 268 40 20 chrX 6956826 6956925 -159693371 + L1M5 LINE L1 4558 4658 -1488 9 638 1031 205 54 0 chrX 6957164 6957369 -159692927 + B3 SINE B2 1 216 0 9 638 597 280 49 7 chrX 6957681 6957825 -159692471 + RSINE1 SINE B4 3 152 -13 9 638 858 189 0 0 chrX 6958321 6958464 -159691832 - B1_Mur2 SINE Alu -6 143 1 9 638 195 353 91 11 chrX 6958533 6958708 -159691588 - MIR SINE MIR -66 196 8 9 638 757 204 83 0 chrX 6958827 6958984 -159691312 - B3 SINE B2 -5 211 42 9 638 244 0 56 0 chrX 6958984 6959020 -159691276 + (CAAAAA)n Simple_repeat Simple_repeat 1 38 0 9 638 234 138 0 49 chrX 6959141 6959202 -159691094 + G-rich Low_complexity Low_complexity 4 61 0 9 638 293 308 95 7 chrX 6959262 6959409 -159690887 - L2 LINE L2 -453 2966 2807 9 638 240 35 0 0 chrX 6959809 6959838 -159690458 + (GGA)n Simple_repeat Simple_repeat 3 31 0 9 638 577 225 258 0 chrX 6960548 6960726 -159689570 + ID_B1 SINE B4 1 224 0 9 638 317 99 0 66 chrX 6960726 6960802 -159689494 + A-rich Low_complexity Low_complexity 5 75 0 9 638 710 184 16 0 chrX 6960898 6961023 -159689273 + B3 SINE B2 2 128 -88 9 638 1150 64 87 0 chrX 6961367 6961539 -159688757 + B2_Mm1t SINE B2 7 193 0 9 638 21 71 0 0 chrX 6961705 6961747 -159688549 + AT_rich Low_complexity Low_complexity 1 42 0 9 638 563 321 7 0 chrX 6961756 6961896 -159688400 - RSINE1 SINE B4 -15 150 10 9 638 254 324 18 37 chrX 6962029 6962138 -159688158 + L1MC4 LINE L1 7367 7473 -569 9 638 446 240 56 29 chrX 6962429 6962571 -159687725 + B1F SINE Alu 6 142 -5 9 638 423 265 84 84 chrX 6962659 6962873 -159687423 - MLT1A1 LTR MaLR -150 215 2 9 638 789 195 151 5 chrX 6963150 6963336 -159686960 - B3 SINE B2 -3 213 1 9 638 242 310 0 0 chrX 6963450 6963537 -159686759 - L1MA4 LINE L1 -5 6295 6209 9 638 601 243 37 0 chrX 6963670 6963806 -159686490 - L1MA4 LINE L1 -361 5939 5799 9 638 417 291 51 44 chrX 6964071 6964229 -159686067 - RSINE1 SINE B4 -6 159 1 9 638 382 267 33 41 chrX 6964524 6964645 -159685651 + Tigger5 DNA MER2_type 31 150 -2256 9 638 328 273 22 43 chrX 6964799 6964891 -159685405 - PB1D7 SINE Alu -30 90 1 9 638 1380 193 40 34 chrX 6965021 6965343 -159684953 - Lx7 LINE L1 0 7696 7373 9 638 308 127 0 18 chrX 6965343 6965392 -159684904 + (AGGGGG)n Simple_repeat Simple_repeat 3 51 0 9 638 1620 0 0 0 chrX 6965392 6965572 -159684724 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 9 638 308 127 0 18 chrX 6965572 6965578 -159684718 + (AGGGGG)n Simple_repeat Simple_repeat 4 9 0 9 638 879 168 0 7 chrX 6965578 6965716 -159684580 - Lx6 LINE L1 -345 7115 6979 9 638 5957 202 52 86 chrX 6965715 6966277 -159684019 - Lx7 LINE L1 -1517 6179 5601 9 638 2476 86 6 0 chrX 6966277 6966601 -159683695 - ORR1A2 LTR MaLR 0 327 2 9 638 5957 202 46 139 chrX 6966601 6967779 -159682517 - Lx7 LINE L1 -277 5600 4622 9 638 1214 54 0 0 chrX 6967779 6967926 -159682370 - B1_Mm SINE Alu 0 147 1 9 638 8115 167 46 71 chrX 6967926 6969136 -159681160 - Lx7 LINE L1 -3052 2828 2058 9 638 414 0 0 0 chrX 6969136 6969182 -159681114 + (TG)n Simple_repeat Simple_repeat 2 47 0 9 638 8115 157 40 16 chrX 6969182 6970930 -159679366 - Lx7 LINE L1 -3823 2057 281 9 638 210 71 0 0 chrX 6971972 6972000 -159678296 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 638 1074 116 7 0 chrX 6972012 6972159 -159678137 - B1_Mus1 SINE Alu 0 148 1 9 638 1072 101 25 6 chrX 6973019 6973178 -159677118 + B2_Mm2 SINE B2 1 162 -33 9 638 342 115 0 0 chrX 6973196 6973248 -159677048 + (TA)n Simple_repeat Simple_repeat 1 52 0 9 638 3352 51 2 0 chrX 6973552 6973947 -159676349 - MTA_Mm LTR MaLR 0 396 1 9 638 1242 34 0 0 chrX 6974555 6974702 -159675594 + B1_Mus1 SINE Alu 2 148 0 9 638 1297 98 32 11 chrX 6974972 6975158 -159675138 - B2_Mm2 SINE B2 -5 190 1 9 638 728 130 30 8 chrX 6975161 6975293 -159675003 + B1_Mur1 SINE Alu 14 148 -1 9 638 708 295 75 24 chrX 6975496 6975942 -159674354 + Lx9 LINE L1 5657 6127 -1569 9 638 378 0 0 0 chrX 6976602 6976644 -159673652 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 638 678 306 119 13 chrX 6977285 6977603 -159672693 - MLT1C LTR MaLR -4 463 112 9 638 1281 87 37 21 chrX 6978139 6978327 -159671969 - B2_Mm2 SINE B2 -3 192 2 9 638 229 323 0 0 chrX 6978664 6978729 -159671567 - RMER15 LTR ERVL -108 467 403 9 638 2161 263 139 49 chrX 6978755 6979526 -159670770 - Lx8 LINE L1 -313 7160 6321 9 638 840 221 21 49 chrX 6979624 6979896 -159670400 - Lx8 LINE L1 -1678 5966 5672 9 638 901 82 196 14 chrX 6979896 6979914 -159670382 - B2_Mm2 SINE B2 -18 177 159 9 638 295 23 22 22 chrX 6979914 6979959 -159670337 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 9 638 901 82 196 14 chrX 6979959 6980088 -159670208 - B2_Mm2 SINE B2 -37 158 3 9 638 840 203 19 53 chrX 6980088 6980113 -159670183 - Lx8 LINE L1 -176 5671 5647 9 638 228 135 0 0 chrX 6980692 6980729 -159669567 + (TTG)n Simple_repeat Simple_repeat 2 38 0 9 638 410 0 0 20 chrX 6980738 6980789 -159669507 + (GTTTG)n Simple_repeat Simple_repeat 5 54 0 9 638 189 0 0 0 chrX 6980805 6980826 -159669470 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 9 638 658 262 0 0 chrX 6980827 6980968 -159669328 - B1F1 SINE Alu -8 141 1 9 638 375 236 108 9 chrX 6981132 6981243 -159669053 - ID_B1 SINE B4 -4 220 99 9 638 237 286 13 13 chrX 6981426 6981504 -159668792 - PB1D10 SINE Alu -13 104 27 9 638 482 254 72 73 chrX 6981789 6982084 -159668212 - L1M2 LINE L1 -3941 2608 2329 9 638 261 278 11 43 chrX 6982101 6982138 -159668158 + L1_Mur3 LINE L1 2490 2527 -3353 9 638 2999 85 5 2 chrX 6982138 6982537 -159667759 - MTB LTR MaLR 0 400 1 9 638 261 278 11 43 chrX 6982537 6982593 -159667703 + L1_Mur3 LINE L1 2528 2579 -3301 9 638 1107 196 192 3 chrX 6982594 6982916 -159667380 - MTD LTR MaLR -15 404 22 9 638 3475 262 42 24 chrX 6982976 6983365 -159666931 + Lx8 LINE L1 6184 6568 -905 9 638 1221 246 66 44 chrX 6983365 6983727 -159666569 - ORR1D2 LTR MaLR 0 370 1 9 638 3475 262 42 24 chrX 6983727 6984312 -159665984 + Lx8 LINE L1 6569 7176 -297 9 638 596 275 11 68 chrX 6984681 6984872 -159665424 + B3A SINE B2 3 182 -16 9 638 345 145 0 0 chrX 6984872 6984948 -159665348 + (CA)n Simple_repeat Simple_repeat 1 76 0 9 638 345 285 109 7 chrX 6985504 6985642 -159664654 + Kanga1c DNA Tc2 362 513 -216 9 638 21 0 0 0 chrX 6985774 6985795 -159664501 + AT_rich Low_complexity Low_complexity 1 21 0 9 638 597 306 29 33 chrX 6985908 6986148 -159664148 - Lx7 LINE L1 -329 7367 7129 9 638 241 122 0 75 chrX 6986162 6986242 -159664054 + T-rich Low_complexity Low_complexity 1 74 0 9 638 245 281 61 0 chrX 6986243 6986325 -159663971 - Lx8 LINE L1 -340 7133 7047 9 638 22 0 0 0 chrX 6986423 6986445 -159663851 + AT_rich Low_complexity Low_complexity 1 22 0 9 638 23 33 0 0 chrX 6986481 6986511 -159663785 + AT_rich Low_complexity Low_complexity 1 30 0 9 638 230 0 0 32 chrX 6986628 6986659 -159663637 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 9 638 697 208 121 22 chrX 6986660 6986842 -159663454 - Lx5 LINE L1 -13 7037 6838 9 638 892 198 116 23 chrX 6987367 6987625 -159662671 - L1MB1 LINE L1 -49 6119 5838 9 638 313 294 11 23 chrX 6987757 6987844 -159662452 - PB1D10 SINE Alu -31 86 1 9 638 385 233 124 43 chrX 6989233 6989510 -159660786 - RMER4B LTR ERVK -23 588 313 9 638 1008 207 61 20 chrX 6989540 6989787 -159660509 - RMER4B LTR ERVK -309 276 20 9 638 945 117 66 0 chrX 6990735 6990872 -159659424 + B1_Mus1 SINE Alu 3 148 0 9 638 321 279 7 105 chrX 6991323 6991366 -159658930 - MT2B LTR ERVL -313 288 197 9 638 503 178 22 0 chrX 6991366 6991456 -159658840 - B1_Mur2 SINE Alu -57 92 1 9 638 321 279 7 105 chrX 6991456 6991475 -159658821 - MT2B LTR ERVL -313 196 152 9 638 832 9 0 27 chrX 6992000 6992111 -159658185 + B1_Mm SINE Alu 40 147 0 9 638 347 302 0 25 chrX 6992858 6992977 -159657319 + MER63B DNA AcHobo 277 392 -44 9 638 537 156 131 37 chrX 6993018 6993153 -159657143 + B1_Mur4 SINE Alu 1 150 0 9 638 215 291 113 119 chrX 6993153 6993182 -159657114 + B4A SINE B4 86 248 -44 9 638 627 148 0 0 chrX 6995202 6995337 -159654959 + (GGGA)n Simple_repeat Simple_repeat 2 136 0 9 638 687 307 146 11 chrX 6996459 6996739 -159653557 + MLT1E2 LTR MaLR 16 333 -294 9 638 294 298 63 17 chrX 6996936 6997139 -159653157 + MLT1E2 LTR MaLR 341 486 -138 9 638 319 299 50 20 chrX 6997167 6997266 -159653030 - PB1D10 SINE Alu -1 116 15 9 638 733 317 98 32 chrX 6997319 6997697 -159652599 + MER68 LTR ERVL 155 557 -6 9 638 1983 162 56 19 chrX 6997707 6998117 -159652179 - Lx5 LINE L1 -813 6237 5813 9 638 394 292 76 92 chrX 6999634 6999819 -159650477 + B3A SINE B2 1 182 -16 9 638 201 147 0 0 chrX 6999819 6999853 -159650443 + (CA)n Simple_repeat Simple_repeat 1 34 0 9 638 255 263 84 0 chrX 7001145 7001240 -159649056 - MIRb SINE MIR -91 177 75 1 638 279 361 25 45 chrX 7001276 7001476 -159648820 + Lx8 LINE L1 7184 7379 -94 2 638 284 0 28 0 chrX 7001665 7001701 -159648595 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 638 558 159 35 9 chrX 7001846 7001960 -159648336 + B1_Mus2 SINE Alu 31 147 0 4 638 192 77 0 0 chrX 7001976 7002002 -159648294 + (CAGG)n Simple_repeat Simple_repeat 2 27 0 5 638 437 0 19 0 chrX 7002034 7002087 -159648209 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 638 332 43 22 0 chrX 7002369 7002415 -159647881 + (TA)n Simple_repeat Simple_repeat 1 47 0 7 638 264 240 266 46 chrX 7003758 7003867 -159646429 - B1F SINE Alu -15 134 2 8 638 316 44 44 0 chrX 7003999 7004044 -159646252 + ORR1D1 LTR MaLR 327 373 -1 9 638 719 155 61 15 chrX 7005136 7005267 -159645029 - B1_Mur2 SINE Alu -1 148 12 1 638 258 32 0 0 chrX 7005863 7005894 -159644402 + (CGTG)n Simple_repeat Simple_repeat 2 32 0 1 638 291 330 53 76 chrX 7007151 7007282 -159643014 + B4 SINE B4 69 196 -96 1 638 516 272 44 7 chrX 7007184 7007321 -159642975 + B1F1 SINE Alu 7 148 -1 1 638 333 243 66 10 chrX 7009003 7009105 -159641191 + MERVL_2A-int LTR ERVL 2461 2550 -3211 1 638 3008 57 18 13 chrX 7009299 7009693 -159640603 + MTB LTR MaLR 1 396 0 1 638 5966 122 89 31 chrX 7009693 7010817 -159639479 + MTB-int LTR MaLR 3 1204 -54 1 638 1109 60 0 0 chrX 7010817 7010951 -159639345 + B1_Mm SINE Alu 2 135 -12 1 638 315 0 0 0 chrX 7010952 7010987 -159639309 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 638 5966 122 89 31 chrX 7010987 7011031 -159639265 + MTB-int LTR MaLR 1205 1241 -17 1 638 3436 28 10 0 chrX 7011032 7011428 -159638868 + MTB LTR MaLR 1 400 0 1 638 1479 209 190 5 chrX 7012474 7012859 -159637437 - RMER1A Other Other -5 1025 570 1 638 368 247 0 0 chrX 7012859 7012940 -159637356 + B3 SINE B2 50 130 -86 1 638 2338 138 38 5 chrX 7013310 7013710 -159636586 + MTC LTR MaLR 1 413 -8 2 638 296 141 0 53 chrX 7015829 7015904 -159634392 + T-rich Low_complexity Low_complexity 1 71 0 2 638 1040 79 43 0 chrX 7015904 7016044 -159634252 - B1_Mm SINE Alu 0 147 2 2 638 27 0 0 26 chrX 7016053 7016078 -159634218 + AT_rich Low_complexity Low_complexity 1 25 0 2 638 757 93 16 0 chrX 7016078 7016207 -159634089 - L1_Mus3 LINE L1 0 6638 6508 2 638 27 0 0 26 chrX 7016207 7016219 -159634077 + AT_rich Low_complexity Low_complexity 1 12 0 2 638 1239 41 0 0 chrX 7016219 7016366 -159633930 - B1_Mm SINE Alu 0 147 1 2 638 1829 278 102 17 chrX 7016460 7017057 -159633239 - Lx8 LINE L1 0 7473 6826 2 638 330 220 147 0 chrX 7017288 7017397 -159632899 - L1MA5 LINE L1 -297 6003 5879 2 638 393 240 0 0 chrX 7017423 7017498 -159632798 - ID4 SINE ID -1 82 8 2 638 1156 281 92 18 chrX 7017500 7017842 -159632454 - L1MA5 LINE L1 -507 5793 5432 2 638 5933 59 20 0 chrX 7017842 7018605 -159631691 - L1_Mus3 LINE L1 -2 6636 5859 3 638 1156 241 134 48 chrX 7018605 7019119 -159631177 - L1MA5 LINE L1 -869 5431 4862 2 638 222 254 18 0 chrX 7019153 7019208 -159631088 - ID4 SINE ID -3 80 25 3 638 512 257 20 34 chrX 7019246 7019393 -159630903 - ID_B1 SINE B4 0 224 82 3 638 2671 251 111 28 chrX 7019723 7020307 -159629989 - L1MA5 LINE L1 -1818 4325 3694 2 638 1414 70 22 0 chrX 7020307 7020492 -159629804 - B2_Mm2 SINE B2 -3 192 4 3 638 2671 251 111 28 chrX 7020492 7020912 -159629384 - L1MA5 LINE L1 -2450 3693 3237 2 638 315 0 0 0 chrX 7020930 7020965 -159629331 + (CATA)n Simple_repeat Simple_repeat 2 36 0 3 638 264 157 19 19 chrX 7020965 7021008 -159629288 + MER21B LTR ERV1 485 528 -335 3 638 3265 98 29 14 chrX 7021609 7022098 -159628198 + Lx3B LINE L1 6473 6968 -5 3 638 487 242 117 32 chrX 7022314 7022468 -159627828 + MER21B LTR ERV1 526 692 -171 3 638 286 246 120 24 chrX 7023135 7023260 -159627036 - MTE2b LTR MaLR -6 373 237 3 638 457 286 19 52 chrX 7023196 7023255 -159627041 + ID_B1 SINE B4 19 218 -3 3 638 897 132 0 27 chrX 7023255 7023403 -159626893 + B1_Mur4 SINE Alu 1 144 -6 3 638 621 273 90 0 chrX 7024061 7024292 -159626004 + L1MA4 LINE L1 5676 5935 -365 4 638 351 0 0 0 chrX 7024446 7024485 -159625811 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 4 638 2116 154 125 6 chrX 7025006 7025040 -159625256 - RLTR11A LTR ERVK 0 527 494 4 638 3237 58 2 2 chrX 7025040 7025435 -159624861 + MTA_Mm LTR MaLR 1 395 -1 4 638 2176 128 42 5 chrX 7025435 7025871 -159624425 - RLTR11A LTR ERVK -34 493 3 4 638 1501 63 5 0 chrX 7026328 7026517 -159623779 - B2_Mm1a SINE B2 -3 190 1 4 638 364 311 10 17 chrX 7027595 7027721 -159622575 - PB1D10 SINE Alu -6 121 4 4 638 443 312 70 44 chrX 7028780 7029192 -159621104 - L1MEf LINE L1 -4971 1229 807 4 638 356 326 140 14 chrX 7029411 7029632 -159620664 - L1MEf LINE L1 -5537 663 415 4 638 962 265 92 26 chrX 7029892 7030198 -159620098 + RMER15 LTR ERVL 238 563 -12 4 638 633 221 57 0 chrX 7030432 7030554 -159619742 + RSINE1 SINE B4 1 129 -36 4 638 184 50 0 91 chrX 7030559 7030577 -159619719 + (TC)n Simple_repeat Simple_repeat 1 18 0 4 638 232 91 0 43 chrX 7030577 7030623 -159619673 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 638 184 50 0 91 chrX 7030623 7030648 -159619648 + (TC)n Simple_repeat Simple_repeat 1 22 0 5 638 180 244 0 22 chrX 7031079 7031125 -159619171 - L4 LINE RTE -1339 690 646 5 638 1131 195 0 14 chrX 7032456 7032664 -159617632 + B3 SINE B2 2 206 -10 5 638 196 277 31 132 chrX 7033283 7033412 -159616884 + MIR SINE MIR 85 200 -62 5 638 632 213 31 8 chrX 7033855 7033983 -159616313 + B1_Mur4 SINE Alu 11 141 -9 5 638 315 301 0 0 chrX 7034202 7034275 -159616021 - MER5A1 DNA MER1_type -60 106 34 5 638 837 215 33 48 chrX 7034373 7034583 -159615713 + URR1A DNA MER1_type 19 225 -1 5 638 26 0 0 0 chrX 7034701 7034727 -159615569 + AT_rich Low_complexity Low_complexity 1 26 0 5 638 2011 141 68 9 chrX 7034776 7035113 -159615183 - Lx4A LINE L1 -44 7014 6658 5 638 413 299 20 27 chrX 7035942 7036090 -159614206 - B1F1 SINE Alu -1 148 2 6 638 10439 55 1 0 chrX 7036140 7037414 -159612882 + L1Md_F2 LINE L1 4311 5585 -298 6 638 8409 41 1 1 chrX 7037415 7038411 -159611885 + L1Md_F2 LINE L1 5587 6582 0 6 638 1647 42 0 0 chrX 7038497 7038689 -159611607 - B2_Mm1a SINE B2 0 193 2 6 638 2321 73 19 6 chrX 7038961 7039279 -159611017 - L1_Mus3 LINE L1 0 6638 6317 6 638 269 302 109 92 chrX 7039283 7039640 -159610656 - RLTR11A2 LTR ERVK -27 500 138 6 638 347 295 9 19 chrX 7039914 7040021 -159610275 + ID_B1 SINE B4 66 171 -53 6 638 497 226 0 0 chrX 7039940 7040042 -159610254 + PB1D10 SINE Alu 10 111 -6 6 638 348 227 0 0 chrX 7040056 7040144 -159610152 + GA-rich Low_complexity Low_complexity 2 89 0 6 638 5950 97 70 21 chrX 7040516 7041429 -159608867 + Lx3B LINE L1 6012 6969 -4 6 638 21 0 0 0 chrX 7041429 7041450 -159608846 + AT_rich Low_complexity Low_complexity 1 21 0 6 638 258 147 143 26 chrX 7041718 7041795 -159608501 + L1_Mur3 LINE L1 4604 4689 -1191 7 638 720 180 329 26 chrX 7041794 7042028 -159608268 - L1_Mur3 LINE L1 -1352 4528 4224 7 638 2535 244 59 135 chrX 7042026 7042209 -159608087 - L1_Mur3 LINE L1 -2063 3817 3644 7 638 1684 154 162 9 chrX 7042209 7042537 -159607759 + ORR1C1 LTR MaLR 1 378 0 7 638 2535 244 59 135 chrX 7042537 7043629 -159606667 - L1_Mur3 LINE L1 -2237 3643 2639 7 638 318 140 35 0 chrX 7043633 7043690 -159606606 - B1_Mur4 SINE Alu -4 146 88 7 638 1184 211 141 30 chrX 7044819 7045180 -159605116 + L1MC4a LINE L1 7472 7872 -10 7 638 222 37 0 0 chrX 7045260 7045287 -159605009 + (T)n Simple_repeat Simple_repeat 1 27 0 7 638 207 0 0 0 chrX 7045806 7045829 -159604467 + (TCC)n Simple_repeat Simple_repeat 2 24 0 7 638 210 245 0 36 chrX 7046102 7046157 -159604139 + MIR3 SINE MIR 149 201 -7 7 638 549 0 0 0 chrX 7046173 7046234 -159604062 + (TC)n Simple_repeat Simple_repeat 1 61 0 7 638 436 280 64 55 chrX 7046979 7047198 -159603098 + MIRb SINE MIR 40 260 -8 7 638 1532 176 18 7 chrX 7047217 7047498 -159602798 + L1MB7 LINE L1 5876 6159 -25 8 638 729 188 28 7 chrX 7047666 7047811 -159602485 - B1_Mur4 SINE Alu -1 149 2 8 638 350 330 60 16 chrX 7047954 7048136 -159602160 + MIR SINE MIR 2 191 -71 8 638 240 274 32 0 chrX 7048629 7048691 -159601605 + MER2B DNA MER2_type 264 327 -9 8 638 460 209 0 32 chrX 7048921 7049015 -159601281 - B3 SINE B2 -125 91 1 8 638 593 163 42 84 chrX 7049261 7049428 -159600868 - B2_Mm2 SINE B2 -8 187 28 8 638 189 0 0 0 chrX 7049430 7049451 -159600845 + (CACCC)n Simple_repeat Simple_repeat 2 22 0 8 638 558 254 285 26 chrX 7049648 7050036 -159600260 + L1_Mur3 LINE L1 4937 5432 -448 8 638 692 157 113 0 chrX 7050047 7050206 -159600090 + Lx4B LINE L1 6865 7041 -17 8 638 648 0 0 0 chrX 7050211 7050283 -159600013 + (GGAA)n Simple_repeat Simple_repeat 3 74 0 8 638 447 63 0 0 chrX 7050284 7050347 -159599949 + (GA)n Simple_repeat Simple_repeat 1 63 0 9 638 3651 84 20 4 chrX 7051346 7051848 -159598448 - L1_Mus4 LINE L1 -6 6630 6121 9 638 417 318 113 35 chrX 7052301 7052646 -159597650 - MLT1C LTR MaLR 0 467 96 9 638 807 218 93 34 chrX 7052846 7053050 -159597246 + ID_B1 SINE B4 3 218 -6 9 638 931 134 81 6 chrX 7053532 7053704 -159596592 + L1_Mus2 LINE L1 6376 6560 -6 9 638 192 77 0 0 chrX 7053736 7053762 -159596534 + (GAAAA)n Simple_repeat Simple_repeat 2 27 0 9 638 585 258 98 6 chrX 7053764 7053928 -159596368 + B3A SINE B2 4 182 -16 9 638 371 145 14 0 chrX 7053928 7053997 -159596299 + (CATA)n Simple_repeat Simple_repeat 1 70 0 9 638 325 266 17 90 chrX 7054248 7054426 -159595870 + L1M3 LINE L1 2888 3052 -3088 9 638 1382 72 5 10 chrX 7054444 7054639 -159595657 + L1Md_F2 LINE L1 6389 6582 0 9 638 553 261 77 13 chrX 7054692 7054718 -159595578 - B3 SINE B2 -8 208 183 1 638 345 47 0 0 chrX 7054718 7054761 -159595535 + (TATG)n Simple_repeat Simple_repeat 4 46 0 1 638 553 261 77 13 chrX 7054761 7054889 -159595407 - B3 SINE B2 -34 182 45 1 638 509 170 104 0 chrX 7054894 7055000 -159595296 + MTC LTR MaLR 4 120 -301 1 638 29 47 0 0 chrX 7055063 7055106 -159595190 + AT_rich Low_complexity Low_complexity 1 43 0 1 638 8224 55 3 0 chrX 7055106 7056169 -159594127 - L1_Mus1 LINE L1 0 6567 5502 1 638 2838 153 6 42 chrX 7056624 7057515 -159592781 - L1_Mur2 LINE L1 -4158 1719 863 1 638 262 188 78 0 chrX 7057864 7057928 -159592368 - L1M2 LINE L1 -3330 2813 2745 1 638 26 50 0 0 chrX 7058024 7058064 -159592232 + AT_rich Low_complexity Low_complexity 1 40 0 1 638 6479 81 33 5 chrX 7059173 7060860 -159589436 - L1VL2 LINE L1 -1789 1826 90 1 638 681 122 0 0 chrX 7060937 7061027 -159589269 - 4.5SRNA scRNA scRNA -4 90 1 1 638 393 22 0 0 chrX 7061051 7061097 -159589199 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 638 519 17 0 0 chrX 7061097 7061156 -159589140 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 638 727 257 51 11 chrX 7061162 7061339 -159588957 - B3A SINE B2 -14 184 1 1 638 389 164 13 27 chrX 7061559 7061634 -159588662 - PB1D10 SINE Alu -1 116 43 1 638 367 236 138 11 chrX 7061637 7061729 -159588567 + MTC LTR MaLR 193 296 -123 1 638 1251 196 55 161 chrX 7061729 7062150 -159588146 + ORR1C2 LTR MaLR 1 376 -8 1 638 361 192 2 12 chrX 7062167 7062251 -159588045 + MTC LTR MaLR 299 419 0 1 638 401 312 18 0 chrX 7062536 7062645 -159587651 - PB1D10 SINE Alu -6 111 1 1 638 397 228 13 0 chrX 7062700 7062779 -159587517 - ID4 SINE ID -3 80 1 1 638 530 266 33 45 chrX 7063007 7063166 -159587130 - ID_B1 SINE B4 -59 233 82 1 638 437 188 5 48 chrX 7063394 7063557 -159586739 - Lx9 LINE L1 -32 7612 7418 1 638 4899 136 37 31 chrX 7063569 7064436 -159585860 - L1_Mur2 LINE L1 -1611 4266 3395 1 638 10338 110 16 0 chrX 7064429 7066757 -159583539 + L1_Mus3 LINE L1 4269 6634 -4 1 638 1962 121 3 29 chrX 7066757 7067063 -159583233 + MTC LTR MaLR 124 421 0 1 638 1118 221 110 34 chrX 7067087 7067415 -159582881 + L1MB2 LINE L1 5816 6168 -3 1 638 228 133 0 48 chrX 7067415 7067478 -159582818 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 638 737 281 139 45 chrX 7067580 7067976 -159582320 + MER31B LTR ERV1 3 435 -31 1 638 649 283 73 47 chrX 7068650 7068991 -159581305 + L1_Mur3 LINE L1 827 1176 -6536 1 638 1757 169 7 75 chrX 7069642 7070252 -159580044 + Lx5 LINE L1 904 1458 -4419 1 638 5879 153 17 5 chrX 7070241 7070584 -159579712 + Lx5 LINE L1 4277 4620 -1257 1 638 183 42 0 0 chrX 7070584 7070608 -159579688 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 638 5879 153 17 5 chrX 7070608 7071273 -159579023 + Lx5 LINE L1 4621 5296 -581 1 638 306 189 510 31 chrX 7071273 7071371 -159578925 + B1_Mus2 SINE Alu 2 146 -1 1 638 6184 119 43 11 chrX 7071380 7072309 -159577987 + Lx2A1 LINE L1 6049 7007 -1 1 638 3077 91 11 2 chrX 7072309 7072759 -159577537 + Lx3A LINE L1 6010 6463 -518 1 638 11884 136 70 9 chrX 7072755 7075628 -159574668 + L1VL2 LINE L1 348 3402 -2481 1 638 8337 127 67 6 chrX 7075628 7077074 -159573222 + ORR1A2-int LTR MaLR 430 1963 0 1 638 1608 98 47 0 chrX 7077074 7077310 -159572986 + ORR1A2 LTR MaLR 1 247 -80 1 638 1305 132 0 29 chrX 7077310 7077511 -159572785 + Lx5 LINE L1 5601 5797 -1253 1 638 1296 101 34 0 chrX 7077511 7077689 -159572607 + B2_Mm2 SINE B2 2 185 -10 1 638 418 235 69 0 chrX 7077699 7077801 -159572495 - ORR1E LTR MaLR -246 113 5 1 79 368 361 22 36 chrX 7077816 7078040 -159572256 - LTR33 LTR ERVL -86 429 209 1 639 396 313 0 0 chrX 7078189 7078288 -159572008 + MLT1F1 LTR MaLR 18 116 -453 1 639 252 305 0 0 chrX 7078388 7078447 -159571849 - MER34 LTR ERV1 -24 563 505 1 639 1026 243 9 18 chrX 7078460 7078678 -159571618 - B3 SINE B2 0 216 1 1 639 766 192 0 27 chrX 7078947 7079097 -159571199 + B3 SINE B2 3 148 -68 1 639 22 35 0 0 chrX 7079126 7079155 -159571141 + AT_rich Low_complexity Low_complexity 1 29 0 1 639 557 253 58 6 chrX 7079355 7079526 -159570770 - MER57A-int LTR ERV1 -210 5977 5798 1 639 272 265 135 98 chrX 7079626 7079655 -159570641 - B2_Mm2 SINE B2 -9 186 158 1 639 180 0 0 0 chrX 7079655 7079675 -159570621 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 639 390 265 135 98 chrX 7079675 7079808 -159570488 - B3A SINE B2 -38 157 18 1 639 414 268 24 65 chrX 7079831 7079999 -159570297 - MER34 LTR ERV1 -74 468 308 1 639 757 147 39 0 chrX 7080063 7080192 -159570104 + RLTR16 LTR ERVK 16 149 -356 1 639 258 322 111 37 chrX 7080219 7080409 -159569887 - MER34 LTR ERV1 -363 208 5 1 639 246 226 226 0 chrX 7080468 7080552 -159569744 + PB1D7 SINE Alu 1 103 -17 1 639 865 265 129 31 chrX 7080576 7081001 -159569295 + L1_Mur3 LINE L1 4109 4575 -1305 1 639 1110 285 41 0 chrX 7081417 7081757 -159568539 + L1M2 LINE L1 4615 4968 -1175 1 639 406 316 59 22 chrX 7081775 7081911 -159568385 + B4 SINE B4 1 141 -151 1 639 324 304 82 52 chrX 7081987 7082219 -159568077 - MER31B LTR ERV1 -8 458 220 1 639 772 90 27 0 chrX 7082389 7082500 -159567796 - B1_Mur2 SINE Alu -10 139 26 1 639 424 255 0 28 chrX 7082650 7082759 -159567537 + MTD LTR MaLR 6 111 -308 1 639 452 186 77 19 chrX 7082768 7082872 -159567424 - RSINE1 SINE B4 -45 120 11 1 639 1293 55 0 0 chrX 7082924 7083070 -159567226 + B1_Mus2 SINE Alu 2 147 0 1 639 896 211 80 45 chrX 7083083 7083282 -159567014 - ORR1D1 LTR MaLR -166 208 3 1 639 624 271 65 0 chrX 7083283 7083438 -159566858 + B3A SINE B2 28 192 -6 1 639 574 302 80 134 chrX 7083448 7083574 -159566722 + RMER4B LTR ERVK 41 175 -291 1 639 405 0 0 0 chrX 7083574 7083619 -159566677 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 639 1504 179 78 33 chrX 7083619 7083940 -159566356 + RMER4B LTR ERVK 176 583 -2 1 639 326 330 0 0 chrX 7083942 7084030 -159566266 + Lx9 LINE L1 6481 6568 -1076 1 639 298 173 0 0 chrX 7084030 7084082 -159566214 - ORR1D1 LTR MaLR -322 52 1 1 639 342 235 204 21 chrX 7084256 7084447 -159565849 + MTD LTR MaLR 154 379 0 1 639 4563 275 58 29 chrX 7084448 7085802 -159564494 + MTD-int LTR MaLR 2 1394 -186 1 639 648 311 39 0 chrX 7085802 7086008 -159564288 + B3 SINE B2 1 214 -2 1 639 14464 152 43 50 chrX 7086030 7086222 -159564074 - Lx6 LINE L1 -2 7458 7264 1 639 448 252 58 0 chrX 7086222 7086325 -159563971 + MTE-int LTR MaLR 258 366 -1214 1 639 14464 152 43 50 chrX 7086325 7090034 -159560262 - Lx6 LINE L1 -2 7263 3480 1 639 585 210 84 0 chrX 7090484 7090603 -159559693 - B1_Mur1 SINE Alu 0 149 21 1 639 228 196 20 0 chrX 7090671 7090722 -159559574 - L2a LINE L2 -22 3404 3353 1 639 6780 126 33 28 chrX 7091334 7091609 -159558687 - Lx6 LINE L1 -2410 3470 3197 1 639 3295 122 52 21 chrX 7091609 7092093 -159558203 + RLTR19 LTR ERVK 1 499 0 1 639 6780 131 33 32 chrX 7092093 7093061 -159557235 - Lx6 LINE L1 -2684 3196 2287 1 639 1284 48 7 0 chrX 7093061 7093206 -159557090 - B1_Mm SINE Alu 0 147 2 1 639 5627 201 27 73 chrX 7093206 7093433 -159556863 - Lx6 LINE L1 -3591 2286 2065 1 639 9060 93 23 20 chrX 7093443 7095062 -159555234 + Lx3C LINE L1 4717 6328 -648 1 639 2723 46 60 27 chrX 7095062 7095397 -159554899 + ORR1A1 LTR MaLR 1 346 0 1 639 9060 108 46 4 chrX 7095397 7095995 -159554301 + Lx3C LINE L1 6329 6973 -3 1 639 30 27 0 0 chrX 7096033 7096070 -159554226 + AT_rich Low_complexity Low_complexity 1 37 0 1 639 1301 266 265 34 chrX 7096116 7096869 -159553427 + Lx8 LINE L1 6329 7255 -218 1 639 208 175 29 76 chrX 7096980 7097085 -159553211 + (CATATA)n Simple_repeat Simple_repeat 2 101 0 1 639 265 280 27 99 chrX 7097436 7097449 -159552847 + MT2B LTR ERVL 155 159 -442 1 639 413 289 37 10 chrX 7097449 7097570 -159552726 + PB1D10 SINE Alu 1 122 -27 1 639 402 233 85 17 chrX 7097581 7097699 -159552597 - Tigger5 DNA MER2_type -95 2311 2186 1 639 669 321 109 4 chrX 7097698 7097936 -159552360 - Tigger5 DNA MER2_type -2098 308 46 1 639 22 35 0 0 chrX 7098109 7098138 -159552158 + AT_rich Low_complexity Low_complexity 1 29 0 1 639 295 23 45 0 chrX 7098832 7098876 -159551420 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 639 937 265 15 0 chrX 7099048 7099252 -159551044 + B3 SINE B2 1 207 -9 1 639 1126 194 54 19 chrX 7099266 7099471 -159550825 + B3 SINE B2 1 212 -4 1 639 686 164 0 52 chrX 7100323 7100457 -159549839 + Lx5 LINE L1 5862 5991 -1059 1 639 212 122 24 0 chrX 7100827 7100868 -159549428 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 1 639 993 282 28 61 chrX 7102659 7103022 -159547274 - MER89 LTR ERV1 0 559 209 1 639 354 255 78 0 chrX 7103082 7103184 -159547112 + L1M3 LINE L1 5329 5438 -742 1 639 230 371 0 0 chrX 7103184 7103254 -159547042 + BC1_Mm scRNA scRNA 2 71 -81 1 639 663 239 3 0 chrX 7103256 7103546 -159546750 + (CA)n Simple_repeat Simple_repeat 1 291 0 1 639 324 252 0 0 chrX 7103566 7103689 -159546607 + (CA)n Simple_repeat Simple_repeat 1 123 0 1 639 405 0 0 0 chrX 7103770 7103815 -159546481 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 639 360 248 143 107 chrX 7103882 7104162 -159546134 + L1MA7 LINE L1 5996 6285 -6 1 639 261 265 0 0 chrX 7104202 7104272 -159546024 + L1M3 LINE L1 5792 5861 -319 1 639 488 319 58 11 chrX 7104272 7104438 -159545858 + ID_B1 SINE B4 70 245 -47 1 639 681 280 19 60 chrX 7104446 7104712 -159545584 + L1MB7 LINE L1 5860 6114 -70 1 639 1506 218 147 3 chrX 7105396 7105750 -159544546 - MTD LTR MaLR -14 405 1 1 639 3639 227 121 70 chrX 7105749 7105856 -159544440 - MTD-int LTR MaLR 0 1258 1146 1 639 513 180 253 26 chrX 7105856 7106010 -159544286 - B2_Mm2 SINE B2 -4 191 3 1 639 3639 227 121 70 chrX 7106010 7107091 -159543205 - MTD-int LTR MaLR -113 1145 9 1 639 1083 235 121 8 chrX 7107122 7107371 -159542925 + B4 SINE B4 2 278 -14 1 639 375 130 0 0 chrX 7107385 7107462 -159542834 + (TCTG)n Simple_repeat Simple_repeat 2 78 0 1 639 405 0 0 0 chrX 7107463 7107508 -159542788 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 639 3471 23 0 0 chrX 7107524 7107915 -159542381 + L1Md_F2 LINE L1 5196 5586 -297 1 639 8872 32 3 2 chrX 7107915 7108908 -159541388 + L1Md_F2 LINE L1 5587 6580 -2 1 639 295 307 38 25 chrX 7109176 7109305 -159540991 + MIRc SINE MIR 25 158 -110 1 639 774 137 151 0 chrX 7109376 7109515 -159540781 - MERVL_2A-int LTR ERVL -3070 2691 2532 1 639 356 181 51 0 chrX 7109561 7109699 -159540597 + (CAGA)n Simple_repeat Simple_repeat 4 148 0 1 639 263 317 24 0 chrX 7109723 7109846 -159540450 + GA-rich Low_complexity Low_complexity 2 127 0 1 639 185 186 34 0 chrX 7109861 7109920 -159540376 + (CAGAGA)n Simple_repeat Simple_repeat 2 62 0 1 639 297 0 0 0 chrX 7110221 7110254 -159540042 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 639 446 263 33 17 chrX 7110269 7110389 -159539907 - MER77 LTR ERVL -254 353 232 2 639 454 189 111 19 chrX 7110504 7110612 -159539684 + MT2A LTR ERVL 1 118 -415 2 639 261 0 0 0 chrX 7111253 7111282 -159539014 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 639 725 223 361 23 chrX 7113281 7113580 -159536716 + MT2A LTR ERVL 94 493 -40 2 639 305 128 0 0 chrX 7113607 7113654 -159536642 - HAL1-3A_ME LINE L1 -846 2012 1966 2 639 261 330 25 0 chrX 7114036 7114154 -159536142 - PB1 SINE Alu -2 125 5 2 639 270 0 0 0 chrX 7115263 7115293 -159535003 + (T)n Simple_repeat Simple_repeat 1 30 0 2 639 1184 82 0 0 chrX 7115293 7115440 -159534856 - B1_Mm SINE Alu 0 147 1 2 639 22 0 0 0 chrX 7115549 7115571 -159534725 + AT_rich Low_complexity Low_complexity 1 22 0 2 639 886 162 0 0 chrX 7115581 7115717 -159534579 - B1_Mus2 SINE Alu -2 145 10 2 639 2522 132 43 13 chrX 7116037 7116435 -159533861 - MTC LTR MaLR -8 413 4 2 639 330 261 138 32 chrX 7116623 7116746 -159533550 + L1M5 LINE L1 3624 3759 -2387 2 639 317 311 61 34 chrX 7116835 7117131 -159533165 + L1M5 LINE L1 3897 4200 -1946 2 639 590 224 11 0 chrX 7117280 7117399 -159532897 + B1_Mur1 SINE Alu 1 122 -27 2 639 450 251 174 14 chrX 7117399 7117611 -159532685 - L1MA5 LINE L1 -381 5919 5675 2 639 372 109 352 38 chrX 7117657 7117762 -159532534 - B2_Mm2 SINE B2 -11 184 47 2 639 1030 105 92 12 chrX 7117828 7117992 -159532304 - B2_Mm1t SINE B2 -14 179 3 2 639 800 306 122 22 chrX 7118021 7118261 -159532035 - L1MA5 LINE L1 -857 5286 5035 2 639 1265 132 107 5 chrX 7118261 7118466 -159531830 + URR1A DNA MER1_type 1 226 0 2 639 800 306 122 22 chrX 7118466 7118677 -159531619 - L1MA5 LINE L1 -1109 5034 4790 2 639 356 124 37 37 chrX 7119010 7119119 -159531177 + (TCTCTG)n Simple_repeat Simple_repeat 6 114 0 2 639 505 235 8 34 chrX 7119423 7119528 -159530768 + B1_Mur3 SINE Alu 33 135 -14 2 639 898 26 0 17 chrX 7119528 7119647 -159530649 + (TAGA)n Simple_repeat Simple_repeat 4 120 0 2 639 505 235 8 34 chrX 7119647 7119660 -159530636 + B1_Mur3 SINE Alu 136 147 -2 2 639 245 188 0 30 chrX 7119660 7119726 -159530570 + GA-rich Low_complexity Low_complexity 1 64 0 2 639 926 246 39 3 chrX 7119749 7120031 -159530265 - L1MA5 LINE L1 -1920 4223 3932 2 639 264 281 0 0 chrX 7120076 7120133 -159530163 + RSINE1 SINE B4 109 165 0 2 639 1528 207 74 44 chrX 7120194 7120557 -159529739 - MTD LTR MaLR -39 380 7 2 639 204 217 0 0 chrX 7120576 7120622 -159529674 + (CGTG)n Simple_repeat Simple_repeat 4 49 0 2 639 276 30 0 0 chrX 7120630 7120663 -159529633 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 639 1316 58 81 0 chrX 7120689 7120862 -159529434 - B2_Mm2 SINE B2 -7 188 2 2 639 858 239 71 31 chrX 7121118 7121343 -159528953 + B4 SINE B4 58 291 -1 2 639 4134 73 11 11 chrX 7122317 7122869 -159527427 + L1_Mus3 LINE L1 6086 6637 -1 2 639 376 337 60 64 chrX 7122894 7123176 -159527120 + ORR1E LTR MaLR 79 359 0 2 639 328 183 0 78 chrX 7123232 7123309 -159526987 + ID4 SINE ID 2 72 -11 2 639 292 250 135 42 chrX 7124579 7124675 -159525621 - PB1D7 SINE Alu -5 115 11 2 639 237 239 27 107 chrX 7124817 7124831 -159525465 + MT2B2 LTR ERVL 150 218 -366 2 639 311 233 0 16 chrX 7124831 7124892 -159525404 + B1F2 SINE Alu 2 61 -88 2 639 370 255 0 22 chrX 7124926 7125015 -159525281 + ID_B1 SINE B4 81 157 -67 2 639 269 309 35 23 chrX 7124944 7125030 -159525266 + B1_Mur3 SINE Alu 6 92 -57 2 639 531 235 26 0 chrX 7125190 7125305 -159524991 + PB1D9 SINE Alu 1 118 -2 2 639 2302 131 80 0 chrX 7125314 7125666 -159524630 - RLTR14 LTR ERV1 0 382 3 2 639 449 298 0 8 chrX 7125727 7125852 -159524444 + PB1 SINE Alu 3 126 -1 2 639 288 53 0 0 chrX 7125968 7126006 -159524290 + (T)n Simple_repeat Simple_repeat 1 38 0 2 639 225 294 0 0 chrX 7126210 7126261 -159524035 - PB1D10 SINE Alu -26 91 41 2 639 904 259 31 75 chrX 7126340 7126632 -159523664 + B4 SINE B4 5 283 -9 2 639 263 302 65 75 chrX 7126756 7126851 -159523445 + B4A SINE B4 106 206 -86 2 639 976 47 0 15 chrX 7126851 7126981 -159523315 + L1_Mus1 LINE L1 6440 6567 0 2 639 263 302 65 75 chrX 7126981 7127071 -159523225 + B4A SINE B4 207 288 -4 2 639 844 261 13 4 chrX 7127125 7127336 -159522960 + B3A SINE B2 3 213 -3 2 639 836 294 74 56 chrX 7127386 7127883 -159522413 + L1MD2 LINE L1 5625 6130 -229 2 639 256 263 41 58 chrX 7128265 7128386 -159521910 - L1M5 LINE L1 -378 5784 5666 2 639 383 208 0 14 chrX 7128399 7128472 -159521824 + ID4_ SINE ID 1 72 -11 2 639 246 128 0 0 chrX 7128474 7128513 -159521783 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 639 554 216 94 8 chrX 7129147 7129264 -159521032 + RSINE1 SINE B4 3 129 -36 2 639 248 276 165 82 chrX 7129264 7129305 -159520991 + B3 SINE B2 2 172 -44 2 639 216 0 0 0 chrX 7129397 7129421 -159520875 + (GA)n Simple_repeat Simple_repeat 2 25 0 2 639 856 55 29 35 chrX 7129421 7129592 -159520704 + (GAGAA)n Simple_repeat Simple_repeat 5 174 0 2 639 287 283 87 0 chrX 7130042 7130134 -159520162 - RMER15 LTR ERVL -105 470 371 2 639 607 203 192 19 chrX 7130625 7130786 -159519510 - MER20 DNA MER1_type -28 191 3 2 639 247 301 48 10 chrX 7132190 7132271 -159518025 + MLT1D LTR MaLR 254 338 -167 2 639 1152 164 92 0 chrX 7132271 7132478 -159517818 - URR1A DNA MER1_type 0 226 1 2 639 247 301 48 10 chrX 7132478 7132500 -159517796 + MLT1D LTR MaLR 339 360 -145 2 639 633 199 3 0 chrX 7132550 7132664 -159517632 + B1_Mur4 SINE Alu 5 120 0 2 639 253 200 102 82 chrX 7132902 7133000 -159517296 + RLTR42 LTR ERVK 140 239 0 2 639 252 256 77 0 chrX 7133008 7133086 -159517210 + MLT1D LTR MaLR 418 501 -4 2 639 1648 188 60 17 chrX 7133443 7133790 -159516506 + ORR1D2 LTR MaLR 1 362 -8 2 639 323 283 36 54 chrX 7133931 7134043 -159516253 - MIRb SINE MIR -75 193 84 2 639 597 218 171 70 chrX 7134439 7134457 -159515839 - B3A SINE B2 -10 188 176 2 639 261 0 0 0 chrX 7134457 7134486 -159515810 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 639 597 218 171 70 chrX 7134486 7134625 -159515671 - B3A SINE B2 -23 175 15 2 639 320 301 22 14 chrX 7134702 7134840 -159515456 - Lx8 LINE L1 -200 7273 7135 2 639 263 333 69 0 chrX 7134946 7135105 -159515191 - L1ME3A LINE L1 -222 5951 5782 2 639 308 250 100 0 chrX 7135300 7135400 -159514896 - L2 LINE L2 -1253 2166 2057 2 639 182 216 0 0 chrX 7135673 7135710 -159514586 - L2 LINE L2 -1529 1890 1854 2 639 24 0 0 0 chrX 7136313 7136337 -159513959 + AT_rich Low_complexity Low_complexity 1 24 0 2 639 664 218 0 39 chrX 7138317 7138446 -159511850 + RSINE1 SINE B4 1 124 -41 2 639 243 0 0 0 chrX 7138446 7138473 -159511823 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 639 399 294 113 109 chrX 7138515 7138938 -159511358 + L1MC5 LINE L1 6654 7078 -883 2 639 369 0 0 0 chrX 7138938 7138979 -159511317 + (TC)n Simple_repeat Simple_repeat 1 41 0 2 639 658 275 6 12 chrX 7139180 7139342 -159510954 + RSINE1 SINE B4 5 165 0 2 639 206 185 36 18 chrX 7139342 7139397 -159510899 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 639 437 303 137 74 chrX 7139448 7139578 -159510718 + L1MC5 LINE L1 7397 7563 -398 2 639 905 155 0 7 chrX 7139578 7139727 -159510569 + B1_Mus1 SINE Alu 1 148 0 2 639 437 303 137 74 chrX 7139727 7139743 -159510553 + L1MC5 LINE L1 7564 7581 -380 2 639 875 36 9 0 chrX 7139743 7139854 -159510442 + (GGAGA)n Simple_repeat Simple_repeat 2 113 0 2 639 437 303 137 74 chrX 7139854 7140194 -159510102 + L1MC5 LINE L1 7582 7914 -47 2 639 225 320 47 94 chrX 7140307 7140562 -159509734 + L2 LINE L2 2818 3060 -359 2 639 387 89 0 0 chrX 7140583 7140639 -159509657 + (TCCC)n Simple_repeat Simple_repeat 2 57 0 2 639 249 222 206 0 chrX 7141251 7141314 -159508982 + ID4 SINE ID 7 82 -1 2 639 275 273 74 22 chrX 7141555 7141690 -159508606 - L1ME4a LINE L1 -7 6117 5976 2 639 21 0 0 0 chrX 7142477 7142498 -159507798 + AT_rich Low_complexity Low_complexity 1 21 0 2 639 274 264 147 27 chrX 7142655 7142765 -159507531 - MIRc SINE MIR -98 170 46 2 639 795 185 7 7 chrX 7143324 7143460 -159506836 + B1_Mur4 SINE Alu 1 136 -14 2 639 306 0 0 0 chrX 7143462 7143496 -159506800 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 639 210 37 0 0 chrX 7144113 7144140 -159506156 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 639 238 132 19 19 chrX 7144140 7144187 -159506109 + GA-rich Low_complexity Low_complexity 8 55 0 2 639 324 297 0 94 chrX 7145106 7145266 -159505030 - MER112 DNA MER1_type -20 241 97 2 639 443 289 88 0 chrX 7145338 7145497 -159504799 + MIR SINE MIR 57 229 -33 2 639 181 252 83 83 chrX 7145600 7145708 -159504588 + MIR SINE MIR 33 140 -122 2 639 542 252 0 16 chrX 7145942 7146067 -159504229 - L2b LINE L2 0 3375 3253 2 639 243 261 31 55 chrX 7148601 7148710 -159501586 + MIRc SINE MIR 60 162 -100 2 639 361 301 34 73 chrX 7148997 7149170 -159501126 - MIR SINE MIR -75 201 29 2 639 240 302 157 17 chrX 7149764 7149936 -159500360 + L2b LINE L2 2964 3159 -216 2 639 201 332 61 133 chrX 7149986 7150264 -159500032 + L2b LINE L2 3166 3423 -3 2 639 228 231 0 0 chrX 7151088 7151140 -159499156 + CT-rich Low_complexity Low_complexity 2 53 0 2 639 21 36 0 0 chrX 7151185 7151213 -159499083 + GC_rich Low_complexity Low_complexity 1 28 0 2 639 201 154 0 0 chrX 7151376 7151415 -159498881 + (CGG)n Simple_repeat Simple_repeat 1 39 0 2 639 546 200 63 9 chrX 7153320 7153431 -159496865 + PB1D10 SINE Alu 1 117 0 2 639 565 281 128 22 chrX 7153506 7154030 -159496266 + L2a LINE L2 2639 3221 -205 2 639 201 60 38 57 chrX 7155571 7155624 -159494672 + T-rich Low_complexity Low_complexity 2 53 0 2 639 437 276 9 9 chrX 7155625 7155731 -159494565 - PB1D10 SINE Alu 0 117 12 2 639 225 294 64 73 chrX 7155643 7155753 -159494543 - MT2B2 LTR ERVL -323 261 153 2 639 309 210 158 12 chrX 7155840 7155922 -159494374 - BC1_Mm scRNA scRNA -56 96 3 2 639 233 288 37 22 chrX 7157189 7157324 -159492972 + (TCTCTG)n Simple_repeat Simple_repeat 2 138 0 3 639 748 180 36 186 chrX 7158340 7158593 -159491703 - B3 SINE B2 0 216 2 3 639 808 204 0 27 chrX 7158614 7158760 -159491536 - B1_Mur1 SINE Alu -6 143 2 3 639 612 308 30 12 chrX 7158951 7159194 -159491102 + MIR SINE MIR 13 262 -6 3 639 324 345 71 44 chrX 7159303 7159485 -159490811 - L1M5 LINE L1 -1217 4929 4743 3 639 324 274 0 51 chrX 7159567 7159744 -159490552 + CT-rich Low_complexity Low_complexity 2 169 0 3 639 591 60 0 0 chrX 7159770 7159854 -159490442 + (TA)n Simple_repeat Simple_repeat 2 85 0 3 639 206 336 44 9 chrX 7159954 7160068 -159490228 - MIR SINE MIR -59 149 32 3 639 708 257 148 0 chrX 7161671 7161873 -159488423 - MLT1C LTR MaLR -8 459 228 3 639 321 212 274 0 chrX 7162221 7162334 -159487962 + B1F SINE Alu 1 144 -5 3 639 493 320 55 23 chrX 7162828 7163084 -159487212 + L2c LINE L2 2485 2748 -671 3 639 21 0 0 0 chrX 7163765 7163786 -159486510 + GC_rich Low_complexity Low_complexity 1 21 0 3 639 197 359 82 13 chrX 7163977 7164135 -159486161 + MIRc SINE MIR 33 201 -67 3 639 310 271 45 45 chrX 7165297 7165409 -159484887 + MIR SINE MIR 58 169 -93 3 639 382 325 42 18 chrX 7165382 7165548 -159484748 - MIR SINE MIR -83 179 10 3 639 189 314 123 13 chrX 7165618 7165773 -159484523 + L2c LINE L2 2929 3100 -287 3 639 247 295 106 19 chrX 7166619 7166792 -159483504 - MIR SINE MIR -51 217 35 3 639 520 233 24 32 chrX 7166910 7167034 -159483262 + PB1 SINE Alu 3 125 -2 3 639 499 256 97 58 chrX 7167042 7167113 -159483183 + B4 SINE B4 3 217 -75 3 639 897 132 0 0 chrX 7167113 7167249 -159483047 + B1_Mur4 SINE Alu 6 141 -9 3 639 251 234 125 0 chrX 7167265 7167329 -159482967 + B4A SINE B4 50 121 -171 3 639 1125 204 0 0 chrX 7167411 7167622 -159482674 + B3 SINE B2 1 211 -5 3 639 854 98 0 112 chrX 7167837 7167998 -159482298 + B1_Mur3 SINE Alu 7 149 0 3 639 258 32 0 0 chrX 7167999 7168030 -159482266 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 639 387 243 80 18 chrX 7168044 7168157 -159482139 + PB1D9 SINE Alu 1 120 0 3 639 416 163 11 55 chrX 7168168 7168241 -159482055 + PB1D9 SINE Alu 33 106 -14 3 639 180 111 0 0 chrX 7168241 7168268 -159482028 + (TAA)n Simple_repeat Simple_repeat 2 28 0 3 639 416 163 11 55 chrX 7168268 7168285 -159482011 + PB1D9 SINE Alu 107 119 -1 3 639 264 30 0 0 chrX 7173811 7173844 -159476452 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 3 639 482 222 28 9 chrX 7175492 7175601 -159474695 + PB1D9 SINE Alu 1 111 -9 3 639 240 35 0 0 chrX 7175607 7175636 -159474660 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 3 639 686 273 30 12 chrX 7177243 7177410 -159472886 + RMER30 DNA MER1_type 10 179 -23 3 639 232 378 98 0 chrX 7177427 7177570 -159472726 - L2a LINE L2 -320 3106 2950 3 639 258 109 22 0 chrX 7178138 7178184 -159472112 + B1_Mm SINE Alu 101 147 0 3 639 283 152 119 0 chrX 7178384 7178443 -159471853 + ID4 SINE ID 8 73 -10 3 639 270 214 129 0 chrX 7178443 7178454 -159471842 + ID SINE ID 8 86 -138 3 639 180 0 0 0 chrX 7178482 7178502 -159471794 + (CAA)n Simple_repeat Simple_repeat 1 20 0 3 639 378 305 50 25 chrX 7178567 7178688 -159471608 + MIR SINE MIR 16 139 -123 3 639 1085 188 5 32 chrX 7178703 7178923 -159471373 + B3 SINE B2 3 216 0 3 639 219 309 102 9 chrX 7178941 7179049 -159471247 + MIRb SINE MIR 131 248 -20 3 639 2002 152 46 14 chrX 7179229 7179595 -159470701 + ORR1C1 LTR MaLR 1 378 0 3 639 308 192 53 27 chrX 7179757 7179832 -159470464 + L1MC4a LINE L1 6603 6679 -1203 3 639 501 198 0 0 chrX 7179832 7179948 -159470348 + (TA)n Simple_repeat Simple_repeat 2 117 0 3 639 271 264 0 53 chrX 7180498 7180574 -159469722 - ID4_ SINE ID 0 83 12 3 639 205 247 195 0 chrX 7181031 7181108 -159469188 - MIRb SINE MIR -67 201 110 3 639 228 302 0 0 chrX 7182777 7182840 -159467456 + MIR SINE MIR 111 173 -89 3 639 380 268 42 51 chrX 7182878 7182996 -159467300 + RSINE1 SINE B4 45 161 -4 3 639 359 319 27 27 chrX 7183037 7183185 -159467111 + RSINE1 SINE B4 14 161 -4 3 639 213 268 0 0 chrX 7183213 7183254 -159467042 + ID_B1 SINE B4 81 121 -103 3 639 317 268 107 91 chrX 7183300 7183406 -159466890 - L1M5 LINE L1 -1231 4915 4819 3 639 497 16 16 0 chrX 7183406 7183468 -159466828 + (TC)n Simple_repeat Simple_repeat 1 63 0 3 639 317 268 107 91 chrX 7183468 7183493 -159466803 - L1M5 LINE L1 -1328 4818 4800 3 639 380 302 0 8 chrX 7183493 7183610 -159466686 - PB1D10 SINE Alu -1 116 1 3 639 317 268 107 91 chrX 7183610 7183719 -159466577 - L1M5 LINE L1 -1347 4799 4671 3 639 239 54 0 26 chrX 7183755 7183793 -159466503 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 3 639 414 271 156 57 chrX 7183812 7184094 -159466202 - L1M5 LINE L1 -1513 4633 4324 3 639 710 248 24 14 chrX 7184798 7185007 -159465289 - B3 SINE B2 -1 215 5 3 639 191 271 13 67 chrX 7185059 7185134 -159465162 + MIR SINE MIR 5 75 -187 3 639 439 282 16 67 chrX 7185214 7185408 -159464888 - MIR SINE MIR -64 198 15 3 639 280 308 0 0 chrX 7186293 7186371 -159463925 + ID4_ SINE ID 2 79 -4 3 639 450 0 0 0 chrX 7186373 7186423 -159463873 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 639 426 217 104 0 chrX 7186477 7186583 -159463713 + PB1D10 SINE Alu 1 117 0 3 639 956 223 19 46 chrX 7186596 7186812 -159463484 + ID_B1 SINE B4 6 215 -9 3 639 363 44 0 0 chrX 7186812 7186857 -159463439 + (ATG)n Simple_repeat Simple_repeat 1 45 0 3 639 1251 77 38 11 chrX 7189122 7189305 -159460991 - B2_Mm2 SINE B2 -7 188 1 3 639 295 276 81 10 chrX 7189359 7189458 -159460838 + PB1D10 SINE Alu 1 106 -11 3 639 213 309 0 0 chrX 7189490 7189545 -159460751 + ID4 SINE ID 27 81 -2 3 639 255 31 0 0 chrX 7189696 7189728 -159460568 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 639 575 238 84 49 chrX 7189800 7189838 -159460458 + B3 SINE B2 1 46 -170 3 639 803 136 23 8 chrX 7189838 7189971 -159460325 + B1_Mus2 SINE Alu 1 135 -12 3 639 575 238 84 49 chrX 7189971 7190135 -159460161 + B3 SINE B2 47 210 -6 3 639 240 308 120 37 chrX 7190172 7190280 -159460016 + PB1D10 SINE Alu 1 117 0 3 639 569 265 6 107 chrX 7190223 7190428 -159459868 + ID_B1 SINE B4 39 215 -77 3 639 366 23 0 0 chrX 7190457 7190500 -159459796 + (TAGG)n Simple_repeat Simple_repeat 1 43 0 3 639 432 324 52 0 chrX 7190522 7190658 -159459638 + RSINE1 SINE B4 6 148 -17 3 639 405 0 0 0 chrX 7190678 7190723 -159459573 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 3 639 330 369 0 0 chrX 7190764 7190875 -159459421 - L2b LINE L2 -304 3071 2961 3 639 549 256 80 23 chrX 7192443 7192619 -159457677 + MIR SINE MIR 63 248 -20 3 639 240 217 159 0 chrX 7192716 7192785 -159457511 + ID4_ SINE ID 1 80 -3 3 639 21 0 0 0 chrX 7192794 7192815 -159457481 + AT_rich Low_complexity Low_complexity 1 21 0 3 639 373 297 17 17 chrX 7193544 7193722 -159456574 + (CCCCAA)n Simple_repeat Simple_repeat 3 180 0 3 639 323 280 0 0 chrX 7194902 7194977 -159455319 - L2a LINE L2 0 3426 3352 3 639 356 238 172 0 chrX 7195111 7195233 -159455063 + B1_Mur1 SINE Alu 2 144 -5 3 639 334 309 0 0 chrX 7195297 7195391 -159454905 + PB1D10 SINE Alu 4 97 -20 3 639 567 272 22 0 chrX 7195910 7196046 -159454250 + B1_Mur2 SINE Alu 3 141 -8 3 639 638 238 50 70 chrX 7196046 7196245 -159454051 + B3A SINE B2 3 197 -1 3 639 363 227 92 92 chrX 7196621 7196752 -159453544 + ID_B1 SINE B4 93 223 -1 3 639 265 229 14 41 chrX 7196874 7196947 -159453349 + MER103 DNA DNA 20 90 -76 3 639 316 298 29 9 chrX 7196981 7197086 -159453210 - L2a LINE L2 -17 3409 3303 3 639 354 98 0 0 chrX 7197178 7197229 -159453067 + (GGA)n Simple_repeat Simple_repeat 1 51 0 3 639 259 253 0 0 chrX 7197993 7198057 -159452239 + PB1D7 SINE Alu 60 140 -9 3 639 504 0 0 0 chrX 7198065 7198121 -159452175 + (GA)n Simple_repeat Simple_repeat 1 56 0 3 639 268 333 115 34 chrX 7199709 7199917 -159450379 + MIR SINE MIR 14 238 -24 3 639 691 261 7 0 chrX 7200129 7200271 -159450025 - RSINE1 SINE B4 -20 145 3 3 639 309 258 117 36 chrX 7200274 7200411 -159449885 - B1F SINE Alu -1 148 1 3 639 610 217 21 28 chrX 7200429 7200571 -159449725 - B1F2 SINE Alu -1 148 8 3 639 419 292 9 0 chrX 7201229 7201342 -159448954 - PB1D10 SINE Alu -3 114 1 3 639 392 159 0 14 chrX 7201842 7201912 -159448384 + B1_Mur2 SINE Alu 81 149 0 3 639 899 119 250 0 chrX 7201915 7202083 -159448213 + B3 SINE B2 1 210 -6 3 639 212 128 0 78 chrX 7202860 7202911 -159447385 + C-rich Low_complexity Low_complexity 6 52 0 3 639 251 292 65 33 chrX 7203031 7203123 -159447173 - Kanga1c DNA Tc2 -626 103 9 3 639 485 294 17 0 chrX 7206144 7206263 -159444033 + RSINE1 SINE B4 5 125 -40 3 639 432 37 0 0 chrX 7206263 7206317 -159443979 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 639 249 128 0 0 chrX 7206320 7206367 -159443929 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 3 639 231 254 0 0 chrX 7208488 7208543 -159441753 + GA-rich Low_complexity Low_complexity 2 56 0 3 640 920 57 0 8 chrX 7209106 7209224 -159441072 + B1_Mm SINE Alu 20 137 -10 3 640 261 0 0 0 chrX 7209224 7209253 -159441043 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 640 210 282 0 82 chrX 7209351 7209436 -159440860 + PB1D10 SINE Alu 39 116 -1 4 640 761 222 0 7 chrX 7209524 7209669 -159440627 + B1_Mur1 SINE Alu 1 144 -5 4 640 223 351 108 0 chrX 7210443 7210554 -159439742 - MIRb SINE MIR -78 190 68 4 640 225 258 0 0 chrX 7210571 7210637 -159439659 + (TATG)n Simple_repeat Simple_repeat 4 69 0 4 640 501 327 58 65 chrX 7210639 7210933 -159439363 - B4A SINE B4 0 292 1 4 640 286 299 0 0 chrX 7210949 7211032 -159439264 + ID_B1 SINE B4 72 150 -74 4 640 274 218 37 49 chrX 7211062 7211144 -159439152 + ID_B1 SINE B4 143 223 -1 4 640 528 265 38 8 chrX 7211155 7211288 -159439008 + B1F SINE Alu 11 147 -2 4 640 267 261 0 55 chrX 7211357 7211430 -159438866 + ID4 SINE ID 1 69 -14 4 640 246 241 0 0 chrX 7212980 7213034 -159437262 - L2b LINE L2 -2 3373 3320 4 640 197 233 0 0 chrX 7213000 7213043 -159437253 - MIRb SINE MIR -18 250 208 4 640 268 309 31 10 chrX 7213428 7213526 -159436770 - L2b LINE L2 -556 2863 2764 4 640 964 110 0 14 chrX 7213685 7213823 -159436473 - B1_Mur4 SINE Alu -13 137 2 4 640 944 129 0 14 chrX 7213994 7214136 -159436160 + B1_Mur3 SINE Alu 1 140 -9 4 640 441 0 0 0 chrX 7214136 7214185 -159436111 + (TAAAA)n Simple_repeat Simple_repeat 2 50 0 4 640 556 231 77 0 chrX 7214191 7214334 -159435962 + RSINE1 SINE B4 2 155 -10 4 640 828 129 71 0 chrX 7214375 7214515 -159435781 + B1_Mur4 SINE Alu 1 150 0 4 640 340 290 0 27 chrX 7214545 7214655 -159435641 + ID_B1 SINE B4 109 215 -9 4 640 992 95 0 7 chrX 7214660 7214809 -159435487 + B1_Mus1 SINE Alu 1 148 0 4 640 189 74 0 0 chrX 7214810 7214837 -159435459 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 640 541 184 87 16 chrX 7215357 7215484 -159434812 + MIRb SINE MIR 74 209 -59 4 640 21 36 0 0 chrX 7215755 7215783 -159434513 + GC_rich Low_complexity Low_complexity 1 28 0 4 640 291 54 0 0 chrX 7215959 7215996 -159434300 + (CTGGGG)n Simple_repeat Simple_repeat 1 37 0 4 640 1084 18 49 0 chrX 7217645 7217808 -159432488 + (GA)n Simple_repeat Simple_repeat 1 171 0 4 640 206 239 0 14 chrX 7217919 7217991 -159432305 + G-rich Low_complexity Low_complexity 5 75 0 4 640 435 219 29 0 chrX 7218746 7218849 -159431447 + PB1D7 SINE Alu 6 111 -9 4 640 239 189 0 54 chrX 7218800 7218856 -159431440 + ID_B1 SINE B4 170 222 -2 4 640 648 248 27 14 chrX 7218860 7219007 -159431289 + RSINE1 SINE B4 17 165 0 4 640 244 297 13 13 chrX 7219261 7219336 -159430960 - L2a LINE L2 -31 3395 3321 4 640 247 358 45 14 chrX 7219391 7219545 -159430751 + MIRb SINE MIR 104 257 -5 4 640 298 194 113 0 chrX 7219746 7219808 -159430488 + ID4 SINE ID 5 73 -10 4 640 354 23 0 0 chrX 7219819 7219862 -159430434 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 640 192 270 68 0 chrX 7220261 7220338 -159429958 + MIRb SINE MIR 61 146 -122 4 640 513 224 246 5 chrX 7220490 7220710 -159429586 + B4 SINE B4 2 274 -18 4 640 245 298 12 12 chrX 7220810 7220895 -159429401 - L2a LINE L2 -270 3156 3072 4 640 246 111 0 0 chrX 7220903 7220939 -159429357 - U2 snRNA snRNA -152 36 1 4 640 286 372 0 0 chrX 7220939 7221060 -159429236 - L2a LINE L2 -337 3082 2962 4 640 216 67 0 0 chrX 7221544 7221574 -159428722 + (CTG)n Simple_repeat Simple_repeat 2 31 0 4 640 264 59 0 0 chrX 7222821 7222855 -159427441 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 640 377 191 127 134 chrX 7222963 7223120 -159427176 + MT2B LTR ERVL 109 264 -337 4 640 717 165 33 0 chrX 7223021 7223142 -159427154 + B1_Mur3 SINE Alu 12 136 -13 4 640 210 300 0 0 chrX 7223164 7223214 -159427082 + B3A SINE B2 30 79 -119 4 640 239 288 17 0 chrX 7223237 7223296 -159427000 + B3 SINE B2 152 211 -5 4 640 612 239 35 14 chrX 7223339 7223483 -159426813 + B1F1 SINE Alu 3 149 0 4 640 495 262 16 24 chrX 7223525 7223650 -159426646 + PB1 SINE Alu 1 124 -3 4 640 27 29 0 0 chrX 7223701 7223735 -159426561 + AT_rich Low_complexity Low_complexity 1 34 0 4 640 461 119 0 0 chrX 7223735 7223802 -159426494 - B1_Mur3 SINE Alu 0 149 83 4 640 24 53 0 0 chrX 7223916 7223954 -159426342 + AT_rich Low_complexity Low_complexity 1 38 0 4 640 966 142 7 13 chrX 7223963 7224113 -159426183 + B1_Mur1 SINE Alu 1 149 0 4 640 740 244 64 0 chrX 7224208 7224364 -159425932 - B3 SINE B2 -1 215 50 4 640 286 262 24 24 chrX 7224396 7224478 -159425818 + B1F SINE Alu 68 149 0 4 640 365 240 0 0 chrX 7224514 7224589 -159425707 + B3A SINE B2 2 76 -122 4 640 478 109 280 11 chrX 7224587 7224680 -159425616 + B1_Mur2 SINE Alu 22 139 -10 4 640 633 186 0 56 chrX 7224694 7224819 -159425477 + B1_Mur2 SINE Alu 32 149 0 4 640 239 319 19 6 chrX 7224822 7224980 -159425316 + (TA)n Simple_repeat Simple_repeat 2 161 0 4 640 195 100 0 0 chrX 7225032 7225062 -159425234 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 4 640 846 178 14 7 chrX 7225067 7225214 -159425082 - B1_Mur2 SINE Alu 0 149 2 4 640 266 288 55 0 chrX 7225225 7225298 -159424998 - ID_B1 SINE B4 -6 218 142 4 640 719 86 29 0 chrX 7225304 7225409 -159424887 + B1_Mur4 SINE Alu 42 149 -1 4 640 1174 61 0 7 chrX 7226493 7226641 -159423655 + B1_Mus1 SINE Alu 2 148 0 4 640 415 280 0 18 chrX 7226655 7226764 -159423532 + PB1D10 SINE Alu 2 108 -9 4 640 1263 41 0 0 chrX 7227524 7227670 -159422626 - B1_Mus1 SINE Alu 0 148 3 4 640 389 308 27 40 chrX 7227681 7227830 -159422466 - B1F SINE Alu -2 147 1 4 640 409 255 32 0 chrX 7227845 7227939 -159422357 - ID_B1 SINE B4 -7 217 121 4 640 408 286 28 19 chrX 7227941 7228048 -159422248 - PB1D10 SINE Alu 0 117 10 4 640 604 264 85 75 chrX 7228217 7228405 -159421891 - B3A SINE B2 -5 190 1 4 640 213 39 0 0 chrX 7228414 7228440 -159421856 + (T)n Simple_repeat Simple_repeat 1 26 0 4 640 891 176 0 7 chrX 7228440 7228589 -159421707 - B1_Mur2 SINE Alu 0 149 2 4 640 258 306 77 71 chrX 7228590 7228745 -159421551 + L2a LINE L2 3241 3396 -30 4 640 185 83 28 0 chrX 7229083 7229119 -159421177 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 640 7296 74 19 5 chrX 7231150 7232163 -159418133 - MTA_Mm-int LTR MaLR -71 1027 1 4 640 3157 44 23 10 chrX 7232163 7232554 -159417742 - MTA_Mm LTR MaLR 0 396 1 4 640 435 48 0 0 chrX 7232554 7232616 -159417680 - MTA_Mm-int LTR MaLR 0 1098 1037 4 640 243 0 0 0 chrX 7232619 7232646 -159417650 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 640 1094 70 0 0 chrX 7232646 7232779 -159417517 - B1_Mus1 SINE Alu -9 139 7 4 640 6937 65 29 96 chrX 7232786 7233590 -159416706 - MTA_Mm-int LTR MaLR -47 1051 312 4 640 1203 48 0 7 chrX 7233590 7233738 -159416558 - B1_Mm SINE Alu 0 147 1 4 640 6937 65 29 96 chrX 7233738 7234057 -159416239 - MTA_Mm-int LTR MaLR -787 311 3 4 640 228 268 56 14 chrX 7234713 7234785 -159415511 + MLT1N2 LTR MaLR 91 165 -397 4 640 378 0 0 0 chrX 7237040 7237082 -159413214 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 640 746 248 7 7 chrX 7237083 7237237 -159413059 - B3A SINE B2 -44 154 1 4 640 204 318 91 34 chrX 7237301 7237389 -159412907 - L2a LINE L2 0 3426 3334 4 640 272 292 0 14 chrX 7237389 7237462 -159412834 + ID4 SINE ID 3 74 -9 4 640 404 241 61 18 chrX 7237577 7237691 -159412605 - MER2 DNA MER2_type -76 269 151 4 640 599 252 27 20 chrX 7237808 7237954 -159412342 + B1F1 SINE Alu 1 147 -2 4 640 1008 133 0 7 chrX 7237983 7238127 -159412169 + B1_Mur4 SINE Alu 5 147 -3 4 640 490 303 91 19 chrX 7238337 7238718 -159411578 - L2a LINE L2 -307 3119 2691 4 640 241 219 51 63 chrX 7238831 7238922 -159411374 - B1F1 SINE Alu 0 149 60 4 640 750 141 0 16 chrX 7238953 7239076 -159411220 + B1_Mus1 SINE Alu 15 135 -13 4 640 576 95 0 0 chrX 7239080 7239164 -159411132 + (GGGAGA)n Simple_repeat Simple_repeat 1 84 0 4 640 482 239 56 71 chrX 7239175 7239301 -159410995 + B1_Mur1 SINE Alu 1 124 -25 4 640 641 139 0 69 chrX 7239388 7239504 -159410792 + PB1D9 SINE Alu 13 120 0 4 640 280 336 0 42 chrX 7239526 7239644 -159410652 + PB1D9 SINE Alu 1 113 -7 4 640 666 295 146 43 chrX 7239746 7239822 -159410474 - L2a LINE L2 -1048 2371 2287 4 640 1348 98 5 20 chrX 7239822 7240020 -159410276 - B2_Mm2 SINE B2 0 195 1 4 640 666 295 146 43 chrX 7240020 7240410 -159409886 - L2a LINE L2 -1133 2286 1857 4 640 383 216 96 19 chrX 7241364 7241468 -159408828 + PB1D10 SINE Alu 1 112 -5 4 640 340 297 59 10 chrX 7241853 7241865 -159408431 + B1F SINE Alu 40 144 -3 4 640 397 307 0 0 chrX 7241865 7241953 -159408343 + ID_B1 SINE B4 132 219 -5 4 640 597 94 0 0 chrX 7242605 7242690 -159407606 + (TC)n Simple_repeat Simple_repeat 1 85 0 4 640 230 300 0 81 chrX 7242717 7242804 -159407492 - ID4_ SINE ID -1 82 3 4 640 263 369 0 0 chrX 7244507 7244610 -159405686 + (CCG)n Simple_repeat Simple_repeat 1 103 0 4 640 275 284 0 0 chrX 7244511 7244585 -159405711 + (CCA)n Simple_repeat Simple_repeat 2 75 0 4 640 416 214 14 0 chrX 7245315 7245385 -159404911 + ID4_ SINE ID 8 78 -5 4 640 646 139 37 9 chrX 7245444 7245553 -159404743 - PB1D9 SINE Alu -7 113 2 4 640 221 255 0 0 chrX 7245775 7245822 -159404474 + T-rich Low_complexity Low_complexity 2 48 0 4 640 695 152 78 23 chrX 7245853 7245981 -159404315 - B1_Mur2 SINE Alu -13 136 2 4 640 1182 48 7 27 chrX 7246952 7247102 -159403194 + B1_Mus2 SINE Alu 1 147 0 4 640 260 261 62 0 chrX 7247181 7247246 -159403050 + tRNA-Ala-GCA tRNA tRNA 4 72 -3 4 640 320 249 10 34 chrX 7247246 7247289 -159403007 + ID4 SINE ID 10 112 -40 4 640 634 240 79 11 chrX 7247332 7247509 -159402787 - MIR SINE MIR -1 261 73 4 640 726 12 0 0 chrX 7248670 7248753 -159401543 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 5 640 1348 167 9 0 chrX 7248966 7249187 -159401109 + URR1B DNA MER1_type 1 223 -2 5 640 315 317 40 40 chrX 7249236 7249361 -159400935 - MER46C DNA MER2_type -174 164 40 5 640 381 320 0 0 chrX 7250181 7250284 -159400012 - PB1D10 SINE Alu -2 115 13 5 640 240 35 0 0 chrX 7250301 7250330 -159399966 + (TTA)n Simple_repeat Simple_repeat 2 30 0 5 640 501 248 0 19 chrX 7252674 7252777 -159397519 - RSINE1 SINE B4 -62 103 3 5 640 2318 145 45 60 chrX 7253507 7253729 -159396567 - MTC LTR MaLR -8 413 202 5 640 968 133 14 0 chrX 7253729 7253872 -159396424 - B1_Mus1 SINE Alu -1 147 3 5 640 2318 145 45 60 chrX 7253872 7254068 -159396228 - MTC LTR MaLR -220 201 1 5 640 510 250 30 23 chrX 7254080 7254211 -159396085 + B1F SINE Alu 18 149 0 5 640 27 0 0 0 chrX 7254402 7254429 -159395867 + AT_rich Low_complexity Low_complexity 1 27 0 5 640 1135 69 7 0 chrX 7254429 7254574 -159395722 - B1_Mm SINE Alu 0 147 2 5 640 1294 124 11 0 chrX 7254577 7254763 -159395533 - B2_Mm1t SINE B2 -5 188 1 5 640 837 187 124 31 chrX 7254773 7254966 -159395330 - B3 SINE B2 -5 211 1 5 640 1229 41 0 13 chrX 7255188 7255337 -159394959 + B1_Mus2 SINE Alu 1 147 0 5 640 375 121 0 0 chrX 7255338 7255396 -159394900 + (GAAA)n Simple_repeat Simple_repeat 2 59 0 5 640 251 294 15 0 chrX 7255436 7255504 -159394792 + ID4 SINE ID 12 80 -3 5 640 391 287 11 0 chrX 7255653 7255747 -159394549 + PB1D7 SINE Alu 26 120 0 5 640 497 263 17 3 chrX 7255750 7255866 -159394430 + B3A SINE B2 1 113 -82 5 640 939 164 0 0 chrX 7255915 7256055 -159394241 + B1_Mus2 SINE Alu 1 140 -7 5 640 1192 94 26 52 chrX 7256193 7256384 -159393912 - B2_Mm2 SINE B2 -8 187 2 5 640 839 72 8 67 chrX 7256526 7256660 -159393636 - B1_Mur3 SINE Alu -1 148 23 5 640 319 156 60 172 chrX 7256562 7256678 -159393618 - MT2B LTR ERVL -337 264 162 5 640 273 119 0 0 chrX 7257789 7257831 -159392465 + (TC)n Simple_repeat Simple_repeat 2 43 0 5 640 468 0 0 0 chrX 7257831 7257883 -159392413 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 640 412 297 93 113 chrX 7258362 7258609 -159391687 + L1M5 LINE L1 5461 5702 -462 5 640 401 329 20 46 chrX 7258611 7258764 -159391532 - MLT1A LTR MaLR -33 341 193 5 640 528 16 0 0 chrX 7258774 7258835 -159391461 + (GA)n Simple_repeat Simple_repeat 2 62 0 5 640 264 122 0 0 chrX 7258836 7258877 -159391419 + (GGA)n Simple_repeat Simple_repeat 2 42 0 5 640 1065 99 116 6 chrX 7258879 7259052 -159391244 + B2_Mm1a SINE B2 1 192 -1 5 640 317 279 0 41 chrX 7259061 7259158 -159391138 + B3A SINE B2 105 197 -1 5 640 198 118 58 19 chrX 7259161 7259213 -159391083 + GA-rich Low_complexity Low_complexity 2 55 0 5 640 1721 21 0 0 chrX 7259253 7259445 -159390851 + B2_Mm1a SINE B2 2 193 0 5 640 329 221 149 28 chrX 7259512 7259619 -159390677 + L1ME1 LINE L1 5678 5797 -367 5 640 388 278 36 27 chrX 7259619 7259730 -159390566 + PB1D7 SINE Alu 2 113 -7 5 640 829 183 0 0 chrX 7259764 7259895 -159390401 + B1_Mur1 SINE Alu 1 131 -18 5 640 251 244 30 91 chrX 7259929 7260028 -159390268 + B1_Mus1 SINE Alu 2 94 -54 5 640 285 29 0 0 chrX 7260155 7260189 -159390107 + (TC)n Simple_repeat Simple_repeat 1 34 0 5 640 414 0 0 0 chrX 7260189 7260234 -159390062 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 640 463 345 15 95 chrX 7260234 7260285 -159390011 + L1ME1 LINE L1 5804 5852 -327 5 640 331 218 50 25 chrX 7260285 7260365 -159389931 + ID4_ SINE ID 2 83 0 5 640 463 345 15 95 chrX 7260365 7260649 -159389647 + L1ME1 LINE L1 5853 6112 -67 5 640 502 198 0 11 chrX 7260663 7260755 -159389541 + PB1D10 SINE Alu 21 111 -6 5 640 1087 192 57 0 chrX 7260763 7260956 -159389340 + B3 SINE B2 1 204 -12 5 640 1218 56 0 0 chrX 7260959 7261101 -159389195 - B1_Mus1 SINE Alu -5 143 2 5 640 21 0 0 0 chrX 7261106 7261127 -159389169 + AT_rich Low_complexity Low_complexity 1 21 0 5 640 756 138 60 0 chrX 7261147 7261263 -159389033 + B1_Mur2 SINE Alu 9 131 -18 5 640 351 0 0 0 chrX 7261265 7261304 -159388992 + (TAAA)n Simple_repeat Simple_repeat 4 42 0 5 640 540 241 50 50 chrX 7261311 7261451 -159388845 + RSINE1 SINE B4 13 152 -13 5 640 31 26 0 0 chrX 7261460 7261498 -159388798 + AT_rich Low_complexity Low_complexity 1 38 0 5 640 371 257 147 0 chrX 7261711 7261820 -159388476 - RMER15 LTR ERVL -13 562 438 5 640 846 254 48 14 chrX 7261826 7262034 -159388262 - B3 SINE B2 -1 215 1 5 640 788 242 50 6 chrX 7262064 7262243 -159388053 + B3A SINE B2 9 195 -3 5 640 443 288 45 19 chrX 7262264 7262420 -159387876 + RSINE1 SINE B4 2 161 -4 5 640 302 323 202 0 chrX 7262494 7262618 -159387678 - RSINE1 SINE B4 -14 151 3 5 640 381 43 0 0 chrX 7262887 7262934 -159387362 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 640 969 123 0 46 chrX 7262981 7263134 -159387162 - B1_Mus1 SINE Alu 0 148 3 5 640 392 189 205 1 chrX 7263674 7263800 -159386496 + B2_Mm2 SINE B2 1 156 -42 5 640 456 19 0 0 chrX 7263800 7263853 -159386443 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 640 346 220 219 7 chrX 7263853 7263877 -159386419 + B2_Mm1a SINE B2 150 182 -11 5 640 486 211 50 50 chrX 7263886 7264006 -159386290 + PB1D7 SINE Alu 1 120 0 5 640 536 202 34 26 chrX 7266248 7266365 -159383931 + B1_Mus2 SINE Alu 1 118 -2 5 640 739 294 18 44 chrX 7266560 7266789 -159383507 - ID_B1 SINE B4 0 224 1 5 640 450 238 76 0 chrX 7267105 7267210 -159383086 + PB1D7 SINE Alu 1 113 -7 5 640 549 0 0 0 chrX 7267213 7267274 -159383022 + (GA)n Simple_repeat Simple_repeat 1 61 0 5 640 346 231 86 111 chrX 7267353 7267470 -159382826 + PB1D7 SINE Alu 7 120 0 5 640 388 228 74 25 chrX 7267486 7267567 -159382729 + RSINE1 SINE B4 10 94 -71 5 640 531 204 19 19 chrX 7267967 7268072 -159382224 + B1F SINE Alu 1 105 -44 5 640 471 78 0 0 chrX 7268072 7268136 -159382160 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 640 1206 95 20 35 chrX 7268313 7268341 -159381955 - B2_Mm2 SINE B2 0 195 170 5 640 1205 55 7 0 chrX 7268341 7268487 -159381809 - B1_Mus1 SINE Alu 0 148 2 5 640 1206 95 20 35 chrX 7268487 7268655 -159381641 - B2_Mm2 SINE B2 -26 169 2 5 640 324 248 149 56 chrX 7268899 7269006 -159381290 + PB1D7 SINE Alu 1 120 0 5 640 955 202 28 24 chrX 7269093 7269306 -159380990 - B3 SINE B2 -2 214 1 5 640 434 202 124 0 chrX 7269391 7269480 -159380816 - RSINE1 SINE B4 -36 129 30 5 640 456 67 0 0 chrX 7269482 7269542 -159380754 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 640 252 191 0 0 chrX 7269606 7269648 -159380648 - B3A SINE B2 -137 61 20 5 640 389 308 38 2 chrX 7269646 7269753 -159380543 - PB1D9 SINE Alu 0 117 1 5 640 246 125 0 0 chrX 7269785 7269833 -159380463 + (T)n Simple_repeat Simple_repeat 1 48 0 5 640 1024 48 0 0 chrX 7269833 7269957 -159380339 - B1_Mus2 SINE Alu 0 147 24 5 640 551 222 20 56 chrX 7269948 7270115 -159380181 + MT2A LTR ERVL 78 397 -204 5 640 298 290 28 18 chrX 7270200 7270309 -159379987 + PB1 SINE Alu 7 116 -11 5 640 352 268 120 80 chrX 7270311 7270461 -159379835 + B4 SINE B4 68 223 -69 5 640 630 199 75 15 chrX 7270333 7270466 -159379830 + B1_Mur1 SINE Alu 9 149 0 5 640 284 314 0 56 chrX 7270531 7270639 -159379657 + PB1D10 SINE Alu 1 102 -15 5 640 1227 55 0 0 chrX 7270689 7270834 -159379462 + B1_Mm SINE Alu 2 146 -1 5 640 322 248 207 26 chrX 7270874 7270990 -159379306 + B1F SINE Alu 10 146 -3 5 640 2285 182 10 3 chrX 7271032 7271423 -159378873 + ORR1B1 LTR MaLR 1 394 0 5 640 341 282 0 0 chrX 7271461 7271546 -159378750 + Lx8 LINE L1 6191 6275 -1198 5 640 926 233 217 40 chrX 7271563 7271654 -159378642 + Lx8 LINE L1 6723 6808 -665 5 640 418 240 160 0 chrX 7271654 7271754 -159378542 - PB1D9 SINE Alu 0 120 5 5 640 926 233 217 40 chrX 7271754 7271893 -159378403 + Lx8 LINE L1 6809 6980 -493 5 640 402 21 0 0 chrX 7271893 7271940 -159378356 + (GA)n Simple_repeat Simple_repeat 2 48 0 5 640 926 233 217 40 chrX 7271940 7272010 -159378286 + Lx8 LINE L1 6981 7068 -405 5 640 1810 127 179 11 chrX 7272010 7272189 -159378107 - RMER17C LTR ERVK 0 410 190 5 640 551 15 15 0 chrX 7272189 7272257 -159378039 + (GA)n Simple_repeat Simple_repeat 1 69 0 5 640 1810 127 179 11 chrX 7272257 7272428 -159377868 - RMER17C LTR ERVK -221 189 2 5 640 926 233 217 40 chrX 7272428 7272595 -159377701 + Lx8 LINE L1 7069 7275 -198 5 640 1272 66 48 6 chrX 7272715 7272882 -159377414 - B2_Mm2 SINE B2 -18 177 4 5 640 2053 133 127 47 chrX 7272918 7273223 -159377073 - MTC LTR MaLR -4 417 77 5 640 1158 101 49 33 chrX 7273223 7273407 -159376889 + B2_Mm1a SINE B2 1 187 -6 5 640 2053 133 127 47 chrX 7273407 7273487 -159376809 - MTC LTR MaLR -345 76 1 5 640 451 322 62 14 chrX 7273554 7273699 -159376597 - RSINE1 SINE B4 -4 161 10 5 640 574 93 133 10 chrX 7273732 7273830 -159376466 - PB1D9 SINE Alu -9 111 2 5 640 601 200 0 0 chrX 7273831 7273931 -159376365 - RMER6A LTR ERVK -1 755 656 5 640 553 256 16 0 chrX 7273970 7274095 -159376201 - B3 SINE B2 0 216 90 5 640 354 244 12 0 chrX 7274654 7274740 -159375556 + PB1D10 SINE Alu 1 87 -30 5 640 381 240 41 20 chrX 7275158 7275256 -159375040 + PB1D10 SINE Alu 18 117 0 5 640 832 135 29 22 chrX 7275422 7275558 -159374738 - B1_Mus1 SINE Alu -10 138 2 5 640 343 329 122 27 chrX 7276316 7276578 -159373718 - L2 LINE L2 -402 3017 2731 5 640 1212 48 7 0 chrX 7276677 7276823 -159373473 - B1_Mm SINE Alu 0 147 1 5 640 838 182 6 57 chrX 7277002 7277159 -159373137 - B1_Mur3 SINE Alu 0 149 1 5 640 188 262 0 0 chrX 7277175 7277217 -159373079 - L4 LINE RTE -619 1410 1369 6 640 418 202 25 0 chrX 7277243 7277322 -159372974 - ID_B1 SINE B4 0 224 144 6 640 747 173 53 0 chrX 7277359 7277492 -159372804 - B1_Mur2 SINE Alu -5 144 5 6 640 392 68 1 0 chrX 7277607 7277676 -159372620 - B1_Mm SINE Alu 0 149 50 6 640 489 336 48 22 chrX 7277717 7277948 -159372348 + L2a LINE L2 2466 2702 -717 6 640 455 181 24 0 chrX 7278126 7278209 -159372087 - PB1D9 SINE Alu 0 120 36 6 640 329 316 8 88 chrX 7278360 7278485 -159371811 - PB1 SINE Alu -1 126 12 6 640 195 314 127 0 chrX 7278499 7278617 -159371679 + L2a LINE L2 3241 3373 -53 6 640 772 192 13 33 chrX 7278662 7278813 -159371483 + B1_Mur2 SINE Alu 1 148 -1 6 640 478 259 0 25 chrX 7278862 7278981 -159371315 + B3 SINE B2 96 211 -5 6 640 281 268 84 0 chrX 7279467 7279538 -159370758 + MIR SINE MIR 108 184 -78 6 640 1400 71 33 6 chrX 7279575 7279758 -159370538 - B2_Mm2 SINE B2 -7 188 1 6 640 266 250 89 38 chrX 7280105 7280184 -159370112 + ID SINE ID 1 83 -141 6 640 393 329 82 27 chrX 7280255 7280402 -159369894 + RSINE1 SINE B4 3 157 -8 6 640 283 263 92 99 chrX 7280707 7280859 -159369437 + MT2B2 LTR ERVL 90 240 -344 6 640 429 296 9 9 chrX 7280779 7280888 -159369408 + ID_B1 SINE B4 84 192 -32 6 640 322 276 77 108 chrX 7280888 7280908 -159369388 + PB1 SINE Alu 3 127 0 6 640 241 196 18 18 chrX 7280976 7281033 -159369263 + PB1D10 SINE Alu 59 115 -2 6 640 229 275 88 36 chrX 7281033 7281174 -159369122 + B4A SINE B4 1 148 -144 6 640 305 315 139 0 chrX 7281213 7281321 -159368975 + B1F SINE Alu 22 144 -5 6 640 914 166 87 34 chrX 7281327 7281533 -159368763 + B4A SINE B4 4 220 -72 6 640 944 162 77 53 chrX 7281548 7281756 -159368540 + B3 SINE B2 1 213 -3 6 640 647 226 14 7 chrX 7281769 7281907 -159368389 + B1_Mur4 SINE Alu 12 150 0 6 640 471 237 56 150 chrX 7281907 7281993 -159368303 + B4A SINE B4 100 292 0 6 640 266 255 97 13 chrX 7282159 7282268 -159368028 + B1_Mus2 SINE Alu 5 119 -1 6 640 294 50 0 0 chrX 7282289 7282329 -159367967 + (CAGA)n Simple_repeat Simple_repeat 2 41 0 6 640 774 65 9 9 chrX 7283670 7283778 -159366518 - B1_Mus2 SINE Alu 0 147 40 6 640 304 169 114 25 chrX 7283714 7283793 -159366503 - RLTR25B LTR ERVK -519 509 424 6 640 1270 168 0 46 chrX 7283953 7284172 -159366124 + B3 SINE B2 1 209 -7 6 640 1147 29 50 0 chrX 7284176 7284316 -159365980 + B1_Mus2 SINE Alu 1 147 0 6 640 1031 122 0 0 chrX 7284355 7284503 -159365793 + B2_Mm2 SINE B2 1 148 -47 6 640 341 144 289 0 chrX 7284498 7284588 -159365708 + B2_Mm2 SINE B2 80 195 0 6 640 210 91 0 0 chrX 7284608 7284641 -159365655 + (GAAAA)n Simple_repeat Simple_repeat 1 33 0 6 640 583 242 45 45 chrX 7285875 7286031 -159364265 - B3A SINE B2 -42 156 1 6 640 455 227 12 11 chrX 7286553 7286652 -159363644 + B1F SINE Alu 5 98 -19 6 640 581 270 15 0 chrX 7286665 7286802 -159363494 + B1_Mur1 SINE Alu 2 140 -9 6 640 1049 250 113 7 chrX 7286807 7287242 -159363054 - L1_Mur3 LINE L1 -1709 4171 3691 6 640 1791 258 230 27 chrX 7287233 7287967 -159362329 - RMER1C Other Other -5 1337 455 6 640 235 60 57 57 chrX 7287976 7288029 -159362267 - L1M4 LINE L1 -2410 3736 3684 6 640 225 94 0 0 chrX 7288031 7288063 -159362233 + (T)n Simple_repeat Simple_repeat 1 32 0 6 640 1056 51 80 0 chrX 7288063 7288200 -159362096 - B1_Mus1 SINE Alu 0 148 1 6 640 234 274 29 19 chrX 7288232 7288336 -159361960 + L1M2 LINE L1 4209 4313 -1827 6 640 602 191 34 25 chrX 7288340 7288458 -159361838 + B1_Mur1 SINE Alu 28 146 -3 6 640 1593 48 0 5 chrX 7288463 7288652 -159361644 + B2_Mm1t SINE B2 1 188 -5 6 640 883 264 82 5 chrX 7288658 7289182 -159361114 + L1M2 LINE L1 4280 4858 -1022 6 640 440 254 11 4 chrX 7289189 7289295 -159361001 + B3A SINE B2 1 104 -91 6 640 640 151 34 0 chrX 7289381 7289527 -159360769 + CT-rich Low_complexity Low_complexity 1 151 0 6 640 315 218 333 0 chrX 7289546 7289633 -159360663 - B1_Mm SINE Alu -30 117 2 6 640 240 219 30 45 chrX 7289580 7289647 -159360649 - MT2B2 LTR ERVL -365 219 154 6 640 694 308 124 28 chrX 7289649 7289907 -159360389 + L1M2 LINE L1 5061 5339 -541 6 640 597 124 104 9 chrX 7289907 7290013 -159360283 + PB1D9 SINE Alu 4 119 -1 6 640 694 307 156 39 chrX 7290013 7290488 -159359808 + L1M2 LINE L1 5315 5847 0 6 640 756 198 174 6 chrX 7290630 7290808 -159359488 - B3 SINE B2 -4 212 5 6 640 615 200 50 0 chrX 7290874 7290994 -159359302 - B1_Mur2 SINE Alu -13 136 11 6 640 470 256 16 23 chrX 7291067 7291195 -159359101 + B1F SINE Alu 22 148 -1 6 640 230 343 43 82 chrX 7291946 7292130 -159358166 + MT2B2 LTR ERVL 95 271 -313 6 640 446 246 73 0 chrX 7292027 7292137 -159358159 + B1_Mur1 SINE Alu 8 125 -24 6 640 210 37 0 0 chrX 7292458 7292485 -159357811 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 6 640 1244 42 0 0 chrX 7292485 7292629 -159357667 - B1_Mm SINE Alu -3 144 1 6 640 937 157 135 10 chrX 7292766 7292966 -159357330 - URR1B DNA MER1_type 0 225 1 6 640 1411 74 5 16 chrX 7293259 7293452 -159356844 + B2_Mm1t SINE B2 1 191 -2 6 640 1194 98 6 0 chrX 7293456 7293619 -159356677 + B2_Mm2 SINE B2 1 164 -31 6 640 1028 83 0 8 chrX 7293635 7293769 -159356527 + B1_Mus2 SINE Alu 1 133 -14 6 640 1120 115 0 0 chrX 7293879 7294027 -159356269 - B1_Mus1 SINE Alu 0 148 1 6 640 368 221 93 0 chrX 7294188 7294274 -159356022 - B1_Mur1 SINE Alu 0 149 56 6 640 260 229 55 41 chrX 7294269 7294342 -159355954 + B3 SINE B2 131 204 -12 6 640 239 349 44 82 chrX 7294553 7294566 -159355730 + B4 SINE B4 77 225 -63 6 640 591 289 7 0 chrX 7294566 7294708 -159355588 + B1F1 SINE Alu 7 149 0 6 640 649 216 112 0 chrX 7294745 7294879 -159355417 - RSINE1 SINE B4 -15 150 2 6 640 731 216 151 22 chrX 7294926 7295111 -159355185 - B3 SINE B2 -6 210 2 6 640 778 153 21 55 chrX 7295133 7295278 -159355018 - B1_Mur4 SINE Alu 0 150 11 6 640 1001 183 20 40 chrX 7295428 7295627 -159354669 - B3A SINE B2 -3 195 1 6 640 1088 287 98 14 chrX 7295739 7296156 -159354140 + Lx8 LINE L1 6811 7262 -211 6 640 3306 31 29 3 chrX 7296525 7296911 -159353385 - MTA_Mm LTR MaLR 0 396 1 6 640 1402 70 16 11 chrX 7296965 7297153 -159353143 + B2_Mm2 SINE B2 2 190 -5 6 640 1212 41 7 0 chrX 7297161 7297306 -159352990 + B1_Mm SINE Alu 1 146 -1 6 640 558 0 0 0 chrX 7297310 7297372 -159352924 + (GAAA)n Simple_repeat Simple_repeat 3 64 0 6 640 2737 118 127 2 chrX 7297404 7297870 -159352426 + RLTR28 LTR ERVL 1 524 0 6 640 264 337 11 0 chrX 7297945 7298034 -159352262 + (CA)n Simple_repeat Simple_repeat 1 90 0 6 640 313 284 0 59 chrX 7298074 7298175 -159352121 - MIR SINE MIR -109 153 59 6 640 1223 55 0 7 chrX 7298322 7298470 -159351826 + B1_Mus1 SINE Alu 2 148 0 6 640 309 26 0 0 chrX 7300367 7300405 -159349891 + (T)n Simple_repeat Simple_repeat 1 38 0 6 640 847 171 20 0 chrX 7300722 7300868 -159349428 + B1F1 SINE Alu 1 149 0 6 640 259 190 0 94 chrX 7301581 7301645 -159348651 - PB1D9 SINE Alu -2 118 61 6 640 434 213 0 0 chrX 7301652 7301727 -159348569 + ID4 SINE ID 1 75 -8 6 640 1153 71 0 0 chrX 7301776 7301917 -159348379 - B1_Mus2 SINE Alu -6 141 1 6 640 239 258 174 10 chrX 7301990 7302088 -159348208 - PB1D10 SINE Alu -3 114 1 6 640 1176 62 0 0 chrX 7302160 7302306 -159347990 - B1_Mm SINE Alu 0 147 2 6 640 437 209 288 9 chrX 7302316 7302427 -159347869 - B1_Mur2 SINE Alu -7 142 1 6 640 344 245 121 10 chrX 7302532 7302631 -159347665 - MIRc SINE MIR -115 153 44 6 640 252 0 0 0 chrX 7304841 7304869 -159345427 + (CCA)n Simple_repeat Simple_repeat 2 29 0 6 640 333 291 64 0 chrX 7308462 7308572 -159341724 + PB1D10 SINE Alu 1 117 0 6 640 339 255 157 43 chrX 7308635 7308750 -159341546 + MT2B LTR ERVL 167 294 -307 6 640 297 75 0 0 chrX 7308756 7308796 -159341500 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 640 265 252 191 27 chrX 7312007 7312117 -159338179 - MIRb SINE MIR -100 168 41 6 640 368 263 48 56 chrX 7313100 7313134 -159337162 + B1F SINE Alu 26 63 -86 6 640 423 0 0 0 chrX 7313134 7313181 -159337115 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 640 368 263 48 56 chrX 7313181 7313271 -159337025 + B1F SINE Alu 64 149 0 6 640 611 253 84 0 chrX 7313280 7313446 -159336850 + B3A SINE B2 1 180 -18 6 640 234 284 13 39 chrX 7313509 7313586 -159336710 + ID4_ SINE ID 5 79 -4 6 640 187 318 181 8 chrX 7315735 7315862 -159334434 - MIRc SINE MIR -58 210 62 6 640 223 298 65 114 chrX 7315864 7316027 -159334269 + L2b LINE L2 2959 3115 -260 6 640 574 210 78 28 chrX 7316027 7316169 -159334127 - B1F SINE Alu 0 149 1 6 640 223 298 65 114 chrX 7316169 7316206 -159334090 + L2b LINE L2 3116 3149 -226 6 640 261 0 0 0 chrX 7318773 7318802 -159331494 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 640 794 112 101 29 chrX 7319057 7319195 -159331101 + B1_Mur3 SINE Alu 1 148 -1 6 640 852 139 20 46 chrX 7319816 7319967 -159330329 - B1_Mm SINE Alu 0 147 1 6 640 208 256 0 6 chrX 7320034 7320097 -159330199 + MIRc SINE MIR 115 179 -97 6 640 438 92 68 23 chrX 7320237 7320370 -159329926 + (TA)n Simple_repeat Simple_repeat 1 139 0 7 640 433 266 36 11 chrX 7320372 7320486 -159329810 + B3 SINE B2 38 165 -33 7 640 297 0 0 0 chrX 7320486 7320519 -159329777 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 640 963 116 0 39 chrX 7320571 7320724 -159329572 - B1_Mus2 SINE Alu 0 147 1 7 640 771 223 55 45 chrX 7320727 7320929 -159329367 - B3 SINE B2 -10 206 3 7 640 625 255 45 55 chrX 7320970 7321169 -159329127 + B3A SINE B2 2 198 0 7 640 836 115 62 48 chrX 7321177 7321323 -159328973 + B1_Mur4 SINE Alu 3 150 0 7 640 341 246 0 0 chrX 7321465 7321530 -159328766 - ID4_ SINE ID 0 83 19 7 640 221 252 92 62 chrX 7321623 7321731 -159328565 + MIRm SINE MIR 57 165 -111 7 640 354 112 64 184 chrX 7321788 7321897 -159328399 + MT2B LTR ERVL 168 263 -338 7 640 803 96 8 67 chrX 7321800 7321934 -159328362 + B1_Mur1 SINE Alu 22 147 -2 7 640 385 369 90 43 chrX 7322224 7322479 -159327817 + B4 SINE B4 10 276 -16 7 640 409 244 147 9 chrX 7322518 7322634 -159327662 + RSINE1 SINE B4 1 132 -33 7 640 315 161 0 0 chrX 7322645 7322701 -159327595 + CT-rich Low_complexity Low_complexity 2 57 0 7 640 356 0 23 0 chrX 7322701 7322745 -159327551 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 640 566 93 12 0 chrX 7322921 7323007 -159327289 + (CA)n Simple_repeat Simple_repeat 2 88 0 7 640 570 218 0 0 chrX 7323046 7323147 -159327149 + PB1D10 SINE Alu 12 112 -5 7 640 1321 101 6 0 chrX 7323160 7323338 -159326958 + B2_Mm1t SINE B2 1 179 -14 7 640 426 258 39 123 chrX 7323338 7323494 -159326802 + B2_Mm2 SINE B2 2 142 -53 7 640 1276 41 0 0 chrX 7323494 7323641 -159326655 - B1_Mus1 SINE Alu 0 148 2 7 640 426 258 39 123 chrX 7323641 7323687 -159326609 + B2_Mm2 SINE B2 143 186 -9 7 640 1000 128 0 0 chrX 7324237 7324370 -159325926 - B1_Mus1 SINE Alu -15 133 1 7 640 917 138 28 0 chrX 7324467 7324612 -159325684 - B1_Mur4 SINE Alu -1 149 1 7 640 683 205 13 0 chrX 7324613 7324764 -159325532 + Lx6 LINE L1 7135 7287 -173 7 640 719 224 0 20 chrX 7324779 7324929 -159325367 + B1_Mur3 SINE Alu 2 148 -1 7 640 1269 48 0 0 chrX 7324936 7325083 -159325213 + B1_Mus2 SINE Alu 1 147 0 7 640 899 184 0 13 chrX 7325130 7325279 -159325017 + B1_Mur1 SINE Alu 2 148 -1 7 640 303 294 18 64 chrX 7325287 7325396 -159324900 - PB1 SINE Alu -17 110 7 7 640 201 39 0 0 chrX 7325994 7326020 -159324276 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 7 640 1125 90 0 14 chrX 7326020 7326167 -159324129 - B1_Mus1 SINE Alu -2 146 2 7 640 1108 101 91 48 chrX 7326205 7326392 -159323904 + B2_Mm2 SINE B2 1 195 0 7 640 539 259 0 0 chrX 7326638 7326746 -159323550 + PB1D10 SINE Alu 2 109 -8 7 640 653 239 14 0 chrX 7326761 7326899 -159323397 + B1F2 SINE Alu 9 148 -1 7 640 24 32 0 0 chrX 7327928 7327959 -159322337 + GC_rich Low_complexity Low_complexity 1 31 0 7 640 275 270 0 60 chrX 7328804 7328871 -159321425 - ID2 SINE ID -4 79 17 7 640 1285 41 0 0 chrX 7329551 7329698 -159320598 + B1_Mm SINE Alu 1 147 0 7 640 237 65 0 0 chrX 7329702 7329733 -159320563 + (A)n Simple_repeat Simple_repeat 1 31 0 7 640 427 279 19 19 chrX 7330362 7330468 -159319828 - ID_B1 SINE B4 -1 223 118 7 640 221 217 159 48 chrX 7330413 7330476 -159319820 - PB1 SINE Alu -25 102 33 7 640 312 282 26 0 chrX 7330492 7330570 -159319726 - ID_B1 SINE B4 -7 217 138 7 640 499 197 450 20 chrX 7330572 7330723 -159319573 + B3 SINE B2 1 216 0 7 640 864 195 129 21 chrX 7330850 7331044 -159319252 - B3 SINE B2 -1 215 1 7 640 917 117 29 7 chrX 7331074 7331212 -159319084 - B1_Mur4 SINE Alu -1 149 9 7 640 377 238 12 0 chrX 7331285 7331365 -159318931 - PB1D7 SINE Alu -2 118 38 7 640 1537 32 0 31 chrX 7331644 7331739 -159318557 - B2_Mm1a SINE B2 -3 190 101 7 640 3489 20 5 2 chrX 7331739 7332134 -159318162 - MTA_Mm LTR MaLR 0 396 1 7 640 1537 32 0 31 chrX 7332134 7332234 -159318062 - B2_Mm1a SINE B2 -93 100 1 7 640 189 74 0 0 chrX 7332265 7332292 -159318004 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 7 640 665 56 11 0 chrX 7332587 7332677 -159317619 + (TTCCC)n Simple_repeat Simple_repeat 2 92 0 7 640 1279 83 26 62 chrX 7332677 7332870 -159317426 - B2_Mm2 SINE B2 -9 186 1 7 640 379 264 19 9 chrX 7332891 7332998 -159317298 - PB1D9 SINE Alu 0 120 13 7 640 259 245 0 0 chrX 7333032 7333085 -159317211 - ID_B1 SINE B4 -2 222 170 7 640 246 185 71 36 chrX 7333036 7333092 -159317204 - PB1D9 SINE Alu -6 114 57 7 640 402 100 0 0 chrX 7333116 7333176 -159317120 + (CA)n Simple_repeat Simple_repeat 2 61 0 7 640 1146 68 0 14 chrX 7333194 7333342 -159316954 + B1_Mm SINE Alu 2 147 0 7 640 868 296 47 35 chrX 7333645 7333963 -159316333 - MLT1D LTR MaLR -4 501 180 7 640 1224 61 0 0 chrX 7333984 7334131 -159316165 - B1_Mus2 SINE Alu 0 147 1 7 640 389 111 0 16 chrX 7334160 7334224 -159316072 + B1_Mus2 SINE Alu 78 140 -7 7 640 407 202 11 35 chrX 7334224 7334236 -159316060 - MLT1D LTR MaLR -317 188 176 7 640 216 0 0 0 chrX 7334236 7334260 -159316036 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 640 407 202 11 35 chrX 7334260 7334334 -159315962 - MLT1D LTR MaLR -330 175 104 7 640 467 309 8 23 chrX 7334336 7334465 -159315831 + PB1 SINE Alu 1 127 0 7 640 1146 81 114 11 chrX 7334483 7334658 -159315638 - B2_Mm1a SINE B2 0 193 1 7 640 811 154 39 0 chrX 7334659 7334789 -159315507 + B1_Mur2 SINE Alu 12 146 -3 7 640 285 250 0 45 chrX 7334962 7335029 -159315267 + RSINE1 SINE B4 68 131 -34 7 640 653 200 13 52 chrX 7335098 7335251 -159315045 + B1_Mur1 SINE Alu 2 148 -1 7 640 275 26 0 49 chrX 7335886 7335927 -159314369 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 7 640 715 206 22 7 chrX 7335927 7336064 -159314232 - B1_Mur2 SINE Alu -10 139 1 7 640 1427 88 0 15 chrX 7336078 7336274 -159314022 - B2_Mm2 SINE B2 -2 193 1 7 640 337 276 0 22 chrX 7336288 7336377 -159313919 - PB1 SINE Alu 0 127 41 7 640 286 208 8 12 chrX 7336495 7336553 -159313743 + B1_Mur2 SINE Alu 62 139 -10 7 640 979 232 39 0 chrX 7336633 7336840 -159313456 - B3 SINE B2 -1 215 1 7 640 377 276 48 0 chrX 7336850 7336955 -159313341 - PB1D10 SINE Alu -7 110 1 7 640 1029 83 8 0 chrX 7337089 7337222 -159313074 + B1_Mus2 SINE Alu 2 135 -12 7 640 382 237 5 26 chrX 7337253 7337383 -159312913 + B3 SINE B2 1 207 -9 7 640 417 39 0 0 chrX 7337391 7337442 -159312854 + (CAT)n Simple_repeat Simple_repeat 1 51 0 7 640 1259 41 0 0 chrX 7337466 7337613 -159312683 + B1_Mus2 SINE Alu 1 147 0 7 640 886 224 39 10 chrX 7337625 7337828 -159312468 + B3 SINE B2 8 216 0 7 640 21 0 0 0 chrX 7337835 7337856 -159312440 + AT_rich Low_complexity Low_complexity 1 21 0 7 640 1391 96 0 5 chrX 7337857 7338045 -159312251 + B2_Mm2 SINE B2 2 188 -7 7 640 355 305 0 64 chrX 7338064 7338204 -159312092 + B1_Mur1 SINE Alu 10 140 -9 7 640 450 0 0 0 chrX 7338349 7338399 -159311897 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 7 640 1274 57 0 0 chrX 7338400 7338557 -159311739 - B2_Mm1a SINE B2 -34 159 3 7 640 225 327 45 18 chrX 7338588 7338700 -159311596 - B1F SINE Alu -30 119 5 7 640 243 0 0 0 chrX 7339408 7339435 -159310861 + (A)n Simple_repeat Simple_repeat 1 27 0 7 641 366 197 26 0 chrX 7341501 7341577 -159308719 - ID2 SINE ID 0 83 6 7 641 225 83 0 0 chrX 7341769 7341805 -159308491 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 7 641 359 197 12 50 chrX 7344891 7344971 -159305325 - ID4_ SINE ID -6 77 1 7 641 21 0 0 0 chrX 7345310 7345331 -159304965 + AT_rich Low_complexity Low_complexity 1 21 0 7 641 293 243 40 0 chrX 7345725 7345799 -159304497 + ID4_ SINE ID 1 77 -6 7 641 506 277 18 18 chrX 7347042 7347156 -159303140 - PB1D7 SINE Alu -6 114 1 7 641 596 162 49 41 chrX 7347156 7347258 -159303038 - B1F SINE Alu -46 103 1 7 641 287 239 296 0 chrX 7347287 7347375 -159302921 + PB1D9 SINE Alu 7 120 0 7 641 197 210 16 0 chrX 7347375 7347437 -159302859 + GA-rich Low_complexity Low_complexity 3 65 0 7 641 1279 178 5 0 chrX 7347445 7347659 -159302637 + B3 SINE B2 2 216 0 7 641 405 239 22 0 chrX 7347710 7347802 -159302494 + PB1 SINE Alu 24 117 -10 7 641 904 174 0 0 chrX 7348310 7348459 -159301837 + B1F SINE Alu 1 149 0 7 641 352 306 32 16 chrX 7348631 7348757 -159301539 - L2a LINE L2 -21 3405 3278 7 641 367 182 50 58 chrX 7348800 7348899 -159301397 + B1F SINE Alu 1 108 -19 7 641 381 244 0 72 chrX 7348945 7349042 -159301254 + B3 SINE B2 100 189 -27 7 641 248 224 60 0 chrX 7349149 7349216 -159301080 + ID4_ SINE ID 1 71 -12 7 641 294 221 122 96 chrX 7349868 7349983 -159300313 + PB1D9 SINE Alu 3 120 0 7 641 649 242 132 0 chrX 7349992 7350174 -159300122 + B3 SINE B2 11 216 0 7 641 542 163 71 0 chrX 7350199 7350297 -159299999 + PB1D9 SINE Alu 3 107 -13 7 641 434 305 62 11 chrX 7350364 7350540 -159299756 - MIR SINE MIR -40 222 38 8 641 1280 34 0 0 chrX 7352939 7353085 -159297211 + B1_Mm SINE Alu 1 146 -1 8 641 250 262 94 59 chrX 7353451 7353536 -159296760 + PB1D7 SINE Alu 30 117 -3 8 641 349 280 11 115 chrX 7353538 7353720 -159296576 + RSINE1 SINE B4 3 165 0 8 641 493 257 57 83 chrX 7353722 7353879 -159296417 + ID_B1 SINE B4 73 225 -67 8 641 523 263 109 31 chrX 7353900 7354092 -159296204 + B3 SINE B2 4 210 -6 8 641 501 241 25 41 chrX 7354143 7354264 -159296032 + B1_Mur1 SINE Alu 24 142 -7 8 641 1210 119 11 16 chrX 7354274 7354462 -159295834 + B2_Mm1t SINE B2 2 188 -5 8 641 374 218 78 39 chrX 7354570 7354699 -159295597 + L1MB4 LINE L1 5859 5992 -188 8 641 643 180 312 0 chrX 7354716 7354876 -159295420 - B3 SINE B2 -6 210 1 8 641 379 248 85 26 chrX 7354903 7355056 -159295240 + L1MB4 LINE L1 6015 6176 -4 8 641 933 143 21 0 chrX 7355056 7355196 -159295100 - B1_Mur2 SINE Alu -6 143 1 8 641 1014 183 48 11 chrX 7355199 7355387 -159294909 - B3 SINE B2 -5 211 17 8 641 1188 55 0 7 chrX 7355455 7355602 -159294694 - B1_Mm SINE Alu -1 146 1 8 641 205 182 0 0 chrX 7355613 7355657 -159294639 + T-rich Low_complexity Low_complexity 1 44 0 8 641 891 126 20 40 chrX 7355664 7355813 -159294483 - B1_Mur4 SINE Alu 0 150 5 8 641 513 136 0 0 chrX 7355814 7355917 -159294379 + (TC)n Simple_repeat Simple_repeat 2 104 0 8 641 387 0 0 0 chrX 7355917 7355960 -159294336 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 641 295 308 75 19 chrX 7355988 7356094 -159294202 + PB1D9 SINE Alu 1 112 -8 8 641 391 267 189 25 chrX 7356139 7356263 -159294033 + Lx8 LINE L1 7185 7311 -162 8 641 198 0 0 0 chrX 7356263 7356285 -159294011 + (CA)n Simple_repeat Simple_repeat 1 22 0 8 641 391 267 189 25 chrX 7356285 7356398 -159293898 + Lx8 LINE L1 7312 7461 -12 8 641 4227 127 51 15 chrX 7356495 7357166 -159293130 - Lx2B LINE L1 -116 6884 6190 8 641 453 253 89 11 chrX 7357240 7357420 -159292876 + L1MC LINE L1 3544 3737 -2409 8 641 275 45 45 0 chrX 7357507 7357551 -159292745 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 8 641 1117 50 0 14 chrX 7357551 7357692 -159292604 - B1_Mm SINE Alu 0 147 9 8 641 670 204 38 32 chrX 7357553 7357710 -159292586 - ID_B1 SINE B4 0 224 67 8 641 291 290 21 14 chrX 7357593 7357733 -159292563 - ORR1B1-int LTR MaLR -755 754 614 8 641 297 0 0 0 chrX 7357798 7357831 -159292465 + (T)n Simple_repeat Simple_repeat 1 33 0 8 641 225 214 0 186 chrX 7357881 7357967 -159292329 - MER77 LTR ERVL 0 607 538 8 641 901 119 130 51 chrX 7357978 7358155 -159292141 + B2_Mm2 SINE B2 2 192 -3 8 641 2497 145 5 3 chrX 7358321 7358701 -159291595 - MERVL_2A-int LTR ERVL -3267 2494 2114 8 641 40 0 0 20 chrX 7358715 7358733 -159291563 + AT_rich Low_complexity Low_complexity 1 18 0 8 641 1083 78 0 66 chrX 7358733 7358885 -159291411 - B1_Mm SINE Alu -5 142 1 8 641 40 0 0 20 chrX 7358885 7358917 -159291379 + AT_rich Low_complexity Low_complexity 1 32 0 8 641 475 107 12 0 chrX 7358919 7359003 -159291293 - L1_Mus3 LINE L1 -9 6629 6545 8 641 1657 125 94 34 chrX 7359007 7359132 -159291164 - Lx LINE L1 0 6654 6518 8 641 189 0 0 0 chrX 7359132 7359153 -159291143 + (CCCA)n Simple_repeat Simple_repeat 4 24 0 8 641 1657 125 94 34 chrX 7359153 7359324 -159290972 - Lx LINE L1 -137 6517 6340 8 641 314 100 0 0 chrX 7359324 7359364 -159290932 - MERVL_2A-int LTR ERVL -3631 2130 2091 8 641 1204 49 14 0 chrX 7359387 7359531 -159290765 - B1_Mus1 SINE Alu 0 148 3 8 641 7065 145 90 91 chrX 7359532 7360328 -159289968 - MERVL_2A-int LTR ERVL -3655 2106 1240 8 641 889 162 14 0 chrX 7360328 7360476 -159289820 - B1_Mur4 SINE Alu 0 150 1 8 641 7065 145 90 91 chrX 7360476 7360524 -159289772 - MERVL_2A-int LTR ERVL -4522 1239 1192 8 641 1295 69 74 0 chrX 7360524 7360699 -159289597 - B2_Mm2 SINE B2 -7 188 1 8 641 7065 145 90 91 chrX 7360699 7360751 -159289545 - MERVL_2A-int LTR ERVL -4570 1191 1142 8 641 1148 63 7 0 chrX 7360751 7360894 -159289402 + B1_Mus1 SINE Alu 5 148 0 8 641 7065 145 90 91 chrX 7360894 7361028 -159289268 - MERVL_2A-int LTR ERVL -4620 1141 1057 8 641 862 191 14 0 chrX 7361028 7361169 -159289127 + B1_Mur4 SINE Alu 2 144 -6 8 641 7065 145 90 91 chrX 7361169 7361271 -159289025 - MERVL_2A-int LTR ERVL -4705 1056 1002 8 641 183 100 0 0 chrX 7361271 7361301 -159288995 + (TAGTG)n Simple_repeat Simple_repeat 1 30 0 8 641 7065 145 90 91 chrX 7361301 7361644 -159288652 - MERVL_2A-int LTR ERVL -4760 1001 631 8 641 2191 148 26 20 chrX 7361648 7361851 -159288445 - MTC LTR MaLR -8 413 208 8 641 982 98 0 13 chrX 7361851 7362006 -159288290 + (TTTC)n Simple_repeat Simple_repeat 1 153 0 8 641 2191 148 26 20 chrX 7362006 7362146 -159288150 - MTC LTR MaLR -214 207 68 8 641 1202 54 0 7 chrX 7362167 7362316 -159287980 - B1_Mus1 SINE Alu 0 148 1 8 641 3938 138 36 5 chrX 7362317 7362929 -159287367 - MERVL_2A-int LTR ERVL -5129 632 2 8 641 254 237 0 17 chrX 7362930 7362979 -159287317 - MLT2B3 LTR ERVL 0 554 506 8 641 432 0 0 0 chrX 7362979 7363027 -159287269 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 641 2073 159 40 16 chrX 7363082 7363458 -159286838 + RMER12 LTR ERVK 1 385 -937 8 641 1106 89 0 14 chrX 7363458 7363606 -159286690 + B1_Mus1 SINE Alu 2 147 -1 8 641 192 111 0 0 chrX 7363606 7363642 -159286654 + (CCAA)n Simple_repeat Simple_repeat 4 39 0 8 641 21 36 0 0 chrX 7363642 7363670 -159286626 + AT_rich Low_complexity Low_complexity 1 28 0 8 641 1120 45 8 0 chrX 7363670 7363804 -159286492 + B1_Mus1 SINE Alu 2 136 -12 8 641 450 0 0 0 chrX 7363805 7363855 -159286441 + (CAA)n Simple_repeat Simple_repeat 2 51 0 8 641 648 254 28 0 chrX 7363914 7364056 -159286240 + B1_Mur3 SINE Alu 2 147 -2 8 641 553 260 108 89 chrX 7364064 7364178 -159286118 + L1MC3 LINE L1 6286 6389 -1396 8 641 831 211 89 0 chrX 7364178 7364358 -159285938 - B3A SINE B2 -1 197 2 8 641 553 265 106 86 chrX 7364358 7364607 -159285689 + L1MC3 LINE L1 6390 6693 -1349 8 641 866 195 167 107 chrX 7364646 7364999 -159285297 + MT2A LTR ERVL 6 530 -54 8 641 333 0 0 0 chrX 7364999 7365036 -159285260 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 641 265 159 16 16 chrX 7365048 7365112 -159285184 + GA-rich Low_complexity Low_complexity 3 66 0 8 641 263 98 49 0 chrX 7365115 7365156 -159285140 + MT2A LTR ERVL 542 584 0 8 641 239 159 0 22 chrX 7365307 7365344 -159284952 - PB1D7 SINE Alu -1 119 76 8 641 417 54 0 0 chrX 7365352 7365408 -159284888 + (TG)n Simple_repeat Simple_repeat 2 57 0 8 641 309 279 37 25 chrX 7365408 7365480 -159284816 + ID SINE ID 15 89 -135 8 641 218 321 48 0 chrX 7365480 7365492 -159284804 + BC1_Mm scRNA scRNA 15 102 -50 8 641 767 88 0 9 chrX 7365610 7365724 -159284572 + (TTTCC)n Simple_repeat Simple_repeat 4 116 0 8 641 396 0 0 0 chrX 7365725 7365769 -159284527 + (TTTC)n Simple_repeat Simple_repeat 1 44 0 8 641 508 105 13 0 chrX 7365845 7365921 -159284375 + B1_Mus2 SINE Alu 71 147 0 8 641 354 96 0 0 chrX 7365962 7366014 -159284282 + B1_Mur4 SINE Alu 98 149 -1 8 641 359 261 231 31 chrX 7366015 7366240 -159284056 + L1ME1 LINE L1 5802 6071 -108 8 641 746 149 0 9 chrX 7369658 7369773 -159280523 - PB1D10 SINE Alu -3 114 1 8 641 299 45 45 0 chrX 7369819 7369863 -159280433 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 8 641 311 241 0 0 chrX 7369863 7369917 -159280379 - ID4 SINE ID -5 78 25 8 641 661 223 6 98 chrX 7369951 7370115 -159280181 - ID_B1 SINE B4 0 224 76 8 641 409 279 16 16 chrX 7370158 7370282 -159280014 - PB1 SINE Alu -3 124 1 8 641 227 339 51 43 chrX 7370458 7370575 -159279721 + L2a LINE L2 3303 3420 -6 8 641 762 209 96 28 chrX 7370578 7370755 -159279541 + B3 SINE B2 1 189 -27 8 641 287 293 23 68 chrX 7370756 7370844 -159279452 + RSINE1 SINE B4 82 165 0 8 641 234 291 28 44 chrX 7371539 7371719 -159278577 + (TCTCTG)n Simple_repeat Simple_repeat 4 180 0 8 641 285 310 17 39 chrX 7371649 7371830 -159278466 + CT-rich Low_complexity Low_complexity 4 180 0 8 641 799 261 87 0 chrX 7372954 7373138 -159277158 + ID_B1 SINE B4 2 201 -23 8 641 465 341 71 28 chrX 7373243 7373454 -159276842 + MIR SINE MIR 13 232 -30 8 641 268 269 38 25 chrX 7373526 7373606 -159276690 - ID4 SINE ID -1 82 2 8 641 1565 47 5 10 chrX 7374185 7374379 -159275917 - B2_Mm1a SINE B2 0 193 1 8 641 1513 266 65 18 chrX 7374387 7374661 -159275635 - MTD LTR MaLR -14 405 114 8 641 1120 98 45 80 chrX 7374661 7374861 -159275435 + B2_Mm2 SINE B2 3 195 0 8 641 1513 266 65 18 chrX 7374861 7374973 -159275323 - MTD LTR MaLR -306 113 1 8 641 1005 84 231 6 chrX 7375074 7375230 -159275066 - B2_Mm2 SINE B2 -2 193 3 8 641 471 231 24 64 chrX 7375286 7375411 -159274885 + PB1D9 SINE Alu 1 120 0 8 641 1315 97 5 21 chrX 7375463 7375652 -159274644 + B2_Mm2 SINE B2 1 186 -9 8 641 22 0 0 0 chrX 7375667 7375689 -159274607 + AT_rich Low_complexity Low_complexity 1 22 0 8 641 242 361 82 0 chrX 7376218 7376340 -159273956 + MIR SINE MIR 63 194 -68 8 641 186 343 112 39 chrX 7376655 7376834 -159273462 + MIRb SINE MIR 67 258 -10 8 641 289 261 129 54 chrX 7378056 7378242 -159272054 + MIR SINE MIR 63 262 0 8 641 943 19 0 0 chrX 7379042 7379150 -159271146 + B2_Mm2 SINE B2 3 110 -85 8 641 857 120 59 22 chrX 7379154 7379290 -159271006 + B1_Mur4 SINE Alu 5 145 -5 8 641 1088 60 0 0 chrX 7379294 7379428 -159270868 + B1_Mm SINE Alu 14 147 0 8 641 183 162 0 0 chrX 7379433 7379470 -159270826 + GA-rich Low_complexity Low_complexity 3 39 0 8 641 695 174 0 0 chrX 7379506 7379615 -159270681 + PB1D9 SINE Alu 1 109 -11 8 641 462 309 88 11 chrX 7381013 7381288 -159269008 - L1ME3 LINE L1 -28 6136 5844 8 641 213 278 59 49 chrX 7381694 7381796 -159268500 + MIRc SINE MIR 33 135 -133 8 641 21 0 0 0 chrX 7381968 7381989 -159268307 + AT_rich Low_complexity Low_complexity 1 21 0 8 641 710 213 0 16 chrX 7382000 7382129 -159268167 - B1_Mur3 SINE Alu -6 143 17 8 641 697 255 0 0 chrX 7382196 7382345 -159267951 + B1F1 SINE Alu 1 149 0 8 641 337 297 20 55 chrX 7382375 7382429 -159267867 + MT2B LTR ERVL 117 165 -436 9 641 557 231 102 8 chrX 7382429 7382547 -159267749 + B1_Mur2 SINE Alu 2 130 -19 9 641 228 35 0 0 chrX 7382547 7382576 -159267720 + (TCTG)n Simple_repeat Simple_repeat 3 31 0 9 641 348 43 0 0 chrX 7382576 7382621 -159267675 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 641 496 313 18 85 chrX 7382631 7382795 -159267501 + ID_B1 SINE B4 4 156 -68 9 641 1273 48 0 0 chrX 7382795 7382942 -159267354 + B1_Mus2 SINE Alu 1 147 0 9 641 208 139 0 0 chrX 7382942 7382978 -159267318 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 9 641 353 155 13 101 chrX 7382978 7382998 -159267298 + ID_B1 SINE B4 143 161 -63 9 641 5208 102 9 70 chrX 7382998 7383853 -159266443 - RLTR13B4 LTR ERVK 0 803 1 9 641 353 155 13 101 chrX 7383853 7383911 -159266385 + ID_B1 SINE B4 162 214 -10 9 641 605 239 98 72 chrX 7383941 7384176 -159266120 + B4A SINE B4 6 246 -46 9 641 567 231 14 14 chrX 7384240 7384385 -159265911 - B1F SINE Alu -1 148 4 9 641 238 362 65 111 chrX 7384391 7384590 -159265706 - MLT1J LTR MaLR -127 385 196 9 641 311 169 30 238 chrX 7384597 7384641 -159265655 + B1F SINE Alu 10 53 -96 9 641 1324 168 5 9 chrX 7384641 7384857 -159265439 + B3 SINE B2 2 216 0 9 641 311 196 28 233 chrX 7384857 7384941 -159265355 + B1F SINE Alu 48 113 -37 9 641 281 253 136 11 chrX 7384950 7385038 -159265258 + PB1D9 SINE Alu 21 119 -1 9 641 1487 44 44 0 chrX 7385048 7385228 -159265068 + B2_Mm2 SINE B2 2 189 -6 9 641 233 300 136 12 chrX 7385322 7385403 -159264893 + PB1 SINE Alu 1 91 -36 9 641 662 143 141 16 chrX 7385427 7385555 -159264741 + B1_Mur4 SINE Alu 7 150 0 9 641 1350 84 26 16 chrX 7385980 7386173 -159264123 - B2_Mm2 SINE B2 0 195 1 9 641 405 0 0 0 chrX 7386229 7386274 -159264022 + (GA)n Simple_repeat Simple_repeat 2 46 0 9 641 234 274 43 0 chrX 7386274 7386383 -159263913 + ORR1B1-int LTR MaLR 639 752 -757 9 641 990 121 0 14 chrX 7386282 7386425 -159263871 + B1_Mus1 SINE Alu 7 147 -1 9 641 221 321 85 51 chrX 7386474 7386592 -159263704 + PB1 SINE Alu 3 124 -3 9 641 539 102 184 0 chrX 7386642 7386740 -159263556 + B1_Mur1 SINE Alu 34 149 0 9 641 304 271 217 0 chrX 7386764 7386893 -159263403 - MLT1J LTR MaLR -353 159 3 9 641 504 105 0 0 chrX 7387941 7388017 -159262279 + (A)n Simple_repeat Simple_repeat 1 76 0 9 641 1156 48 0 45 chrX 7388078 7388232 -159262064 + B1_Mus2 SINE Alu 1 147 0 9 641 328 360 33 20 chrX 7388297 7388447 -159261849 + MIRb SINE MIR 4 155 -113 9 641 324 220 17 0 chrX 7388460 7388519 -159261777 + tRNA-Ala-GCY_ tRNA tRNA 7 66 -9 9 641 2325 81 131 0 chrX 7388527 7388871 -159261425 + RLTR9B2 LTR ERVK 31 419 -1 9 641 274 264 42 40 chrX 7389013 7389112 -159261184 + PB1D10 SINE Alu 22 141 -8 9 641 1260 34 7 0 chrX 7389121 7389267 -159261029 + B1_Mus1 SINE Alu 2 148 0 9 641 189 171 0 0 chrX 7390386 7390421 -159259875 + (CAT)n Simple_repeat Simple_repeat 1 35 0 9 641 329 309 52 0 chrX 7390421 7390527 -159259769 - B1F1 SINE Alu -7 110 1 9 641 938 108 63 21 chrX 7391038 7391049 -159259247 - B1_Mur4 SINE Alu -1 149 141 9 641 183 42 0 0 chrX 7391049 7391073 -159259223 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 641 938 108 63 21 chrX 7391073 7391203 -159259093 - B1_Mur4 SINE Alu -10 140 2 9 641 226 208 27 14 chrX 7391912 7391985 -159258311 + (TCTCTG)n Simple_repeat Simple_repeat 5 78 0 9 641 259 206 0 171 chrX 7391988 7392064 -159258232 - tRNA-Ala-GCA tRNA tRNA -11 64 2 9 641 501 207 265 35 chrX 7392276 7392446 -159257850 - B3 SINE B2 -7 209 1 9 641 1440 59 16 26 chrX 7392467 7392659 -159257637 - B2_Mm2 SINE B2 -5 190 1 9 641 462 138 37 24 chrX 7392680 7392762 -159257534 - PB1D10 SINE Alu -8 109 27 9 641 1183 55 7 0 chrX 7392776 7392921 -159257375 - B1_Mm SINE Alu 0 147 2 9 641 1104 114 7 0 chrX 7393053 7393202 -159257094 - B1_Mur4 SINE Alu 0 150 1 9 641 1112 128 44 6 chrX 7393258 7393439 -159256857 + B2_Mm2 SINE B2 4 191 -4 9 641 485 261 62 9 chrX 7393454 7393566 -159256730 + PB1 SINE Alu 5 122 -5 9 641 273 268 0 18 chrX 7393582 7393639 -159256657 - ID4_ SINE ID -26 57 2 9 641 830 254 38 38 chrX 7393667 7393880 -159256416 - B3 SINE B2 -1 215 3 9 641 484 259 49 35 chrX 7393886 7394030 -159256266 - B3 SINE B2 0 216 71 9 641 372 315 92 40 chrX 7394009 7394161 -159256135 - B3A SINE B2 -30 168 9 9 641 951 131 27 20 chrX 7394188 7394336 -159255960 - B1_Mur3 SINE Alu 0 149 1 9 641 23 33 0 0 chrX 7394347 7394377 -159255919 + AT_rich Low_complexity Low_complexity 1 30 0 9 641 733 274 59 5 chrX 7394388 7394575 -159255721 + B3A SINE B2 1 197 -1 9 641 347 281 50 42 chrX 7395737 7395856 -159254440 - L1MEe LINE L1 -4065 789 670 9 641 24 0 0 0 chrX 7397511 7397535 -159252761 + AT_rich Low_complexity Low_complexity 1 24 0 9 641 190 295 83 10 chrX 7397790 7397886 -159252410 - L4 LINE RTE -1086 943 841 9 641 447 324 17 6 chrX 7397906 7398148 -159252148 + (TGGA)n Simple_repeat Simple_repeat 1 244 0 9 641 186 43 0 0 chrX 7399743 7399766 -159250530 + (TCC)n Simple_repeat Simple_repeat 3 25 0 9 641 279 157 0 0 chrX 7399764 7399815 -159250481 + (CTG)n Simple_repeat Simple_repeat 1 51 0 9 641 330 26 0 0 chrX 7400815 7400854 -159249442 + (CA)n Simple_repeat Simple_repeat 1 39 0 9 641 1147 26 26 26 chrX 7402279 7402434 -159247862 - B2_Mm2 SINE B2 -8 187 33 9 641 982 70 16 0 chrX 7402432 7402560 -159247736 - B1_Mur4 SINE Alu -20 130 1 9 641 259 235 60 15 chrX 7402452 7402571 -159247725 - ORR1B1-int LTR MaLR -755 754 629 9 641 341 315 0 43 chrX 7402571 7402687 -159247609 - PB1D10 SINE Alu -6 111 1 9 641 259 235 60 15 chrX 7402687 7402701 -159247595 - ORR1B1-int LTR MaLR -881 628 615 9 641 709 258 70 27 chrX 7402740 7402927 -159247369 + B3A SINE B2 1 195 -3 9 641 813 218 7 7 chrX 7402961 7403109 -159247187 - B1_Mur1 SINE Alu 0 149 2 9 641 1033 231 10 0 chrX 7403137 7403345 -159246951 + B3 SINE B2 1 210 -6 9 641 1128 72 0 0 chrX 7403368 7403506 -159246790 + B1_Mus1 SINE Alu 2 139 -9 9 641 234 0 0 0 chrX 7403506 7403532 -159246764 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 9 641 1313 96 17 0 chrX 7403532 7403709 -159246587 + B2_Mm2 SINE B2 2 181 -14 9 641 364 147 0 20 chrX 7403740 7403855 -159246441 + B2_Mm2 SINE B2 47 195 0 9 641 719 216 14 14 chrX 7403860 7404001 -159246295 + B1_Mur1 SINE Alu 1 141 -8 9 641 228 322 115 33 chrX 7404023 7404123 -159246173 + B4 SINE B4 91 196 -96 9 641 1383 71 50 0 chrX 7404123 7404305 -159245991 - B2_Mm1t SINE B2 -1 192 2 9 641 228 322 115 33 chrX 7404305 7404326 -159245970 + B4 SINE B4 197 221 -71 9 641 418 254 139 23 chrX 7404458 7404587 -159245709 - B1F SINE Alu -5 144 1 9 641 216 0 0 0 chrX 7404693 7404717 -159245579 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 9 641 356 254 8 73 chrX 7404800 7404923 -159245373 - PB1D10 SINE Alu 0 117 3 9 641 254 277 94 14 chrX 7405078 7405188 -159245108 - B1_Mus1 SINE Alu -3 114 1 9 641 456 51 0 0 chrX 7405214 7405273 -159245023 + (TG)n Simple_repeat Simple_repeat 1 59 0 9 641 344 22 22 0 chrX 7405318 7405363 -159244933 + (TATG)n Simple_repeat Simple_repeat 1 46 0 9 641 485 303 19 31 chrX 7405364 7405524 -159244772 - RSINE1 SINE B4 -7 158 1 9 641 560 156 191 32 chrX 7405524 7405650 -159244646 - B1_Mur1 SINE Alu -2 147 2 9 641 549 286 84 7 chrX 7405650 7405805 -159244491 - B4A SINE B4 -64 228 62 9 641 1023 267 9 0 chrX 7406225 7406442 -159243854 + ID_B1 SINE B4 1 219 -5 9 641 249 222 27 40 chrX 7406481 7406556 -159243740 - MT2A LTR ERVL -135 398 325 9 641 237 160 180 0 chrX 7406774 7406824 -159243472 + B1_Mm SINE Alu 37 95 -52 9 641 627 186 30 152 chrX 7406825 7406990 -159243306 + B1_Mur4 SINE Alu 1 145 -5 9 641 909 136 15 0 chrX 7407268 7407400 -159242896 - B1_Mus2 SINE Alu -1 146 13 9 641 462 300 58 0 chrX 7407469 7407589 -159242707 - B3A SINE B2 -24 174 48 9 641 905 168 98 39 chrX 7407641 7407809 -159242487 + B3 SINE B2 1 179 -37 9 641 363 127 0 0 chrX 7407809 7407872 -159242424 + (TA)n Simple_repeat Simple_repeat 2 64 0 9 641 905 168 98 39 chrX 7407872 7407907 -159242389 + B3 SINE B2 180 216 0 9 641 949 230 24 10 chrX 7407934 7408140 -159242156 + B3 SINE B2 2 210 -6 9 641 201 121 0 0 chrX 7408144 7408177 -159242119 + (GAAA)n Simple_repeat Simple_repeat 4 36 0 9 641 229 182 130 43 chrX 7408437 7408506 -159241790 - L3 LINE CR1 -520 3969 3895 9 641 540 144 9 80 chrX 7408971 7409084 -159241212 + B1_Mur1 SINE Alu 44 148 -1 9 641 351 0 0 0 chrX 7409678 7409717 -159240579 + (TC)n Simple_repeat Simple_repeat 1 39 0 9 641 525 44 0 0 chrX 7409717 7409784 -159240512 + (CA)n Simple_repeat Simple_repeat 1 68 0 9 641 197 290 91 27 chrX 7409804 7409914 -159240382 - L2a LINE L2 -95 3331 3215 9 641 607 283 65 5 chrX 7409967 7410152 -159240144 - B3A SINE B2 -2 196 1 9 641 808 206 7 0 chrX 7410187 7410328 -159239968 + B1_Mur1 SINE Alu 2 143 -6 9 641 825 204 128 46 chrX 7410444 7410639 -159239657 + B3 SINE B2 1 211 -5 9 641 670 192 6 6 chrX 7410658 7410815 -159239481 + CT-rich Low_complexity Low_complexity 4 160 0 9 641 1119 91 0 0 chrX 7410816 7410959 -159239337 - B1_Mus1 SINE Alu -5 143 1 1 641 3982 91 189 0 chrX 7410959 7411573 -159238723 - RMER19A LTR ERVK -7 730 1 1 641 270 347 111 53 chrX 7411595 7411820 -159238476 - L2a LINE L2 -251 3175 2938 9 641 186 47 68 23 chrX 7411831 7411875 -159238421 + (TTTTTG)n Simple_repeat Simple_repeat 1 46 0 1 641 743 51 271 0 chrX 7411875 7411993 -159238303 - B1_Mur4 SINE Alu 0 150 1 1 641 211 111 21 43 chrX 7412010 7412057 -159238239 + T-rich Low_complexity Low_complexity 3 48 0 1 641 1097 97 0 0 chrX 7412058 7412203 -159238093 - B1_Mus1 SINE Alu -1 147 3 1 641 451 282 39 0 chrX 7412206 7412309 -159237987 - PB1D10 SINE Alu -1 116 10 1 641 285 354 21 0 chrX 7412223 7412319 -159237977 - ID_B1 SINE B4 -48 176 79 1 641 932 141 0 75 chrX 7412396 7412517 -159237779 + B1_Mur4 SINE Alu 2 116 -34 1 641 2809 36 45 0 chrX 7412517 7412848 -159237448 - ORR1A1 LTR MaLR 0 346 1 1 641 932 141 0 75 chrX 7412848 7412887 -159237409 + B1_Mur4 SINE Alu 117 150 0 1 641 532 248 90 21 chrX 7412897 7413041 -159237255 + B3 SINE B2 27 180 -36 1 641 262 317 93 80 chrX 7413083 7413234 -159237062 - MIRb SINE MIR -32 236 84 1 641 191 249 0 0 chrX 7413267 7413323 -159236973 + MIRm SINE MIR 200 261 -15 1 641 187 342 13 38 chrX 7415058 7415137 -159235159 - MIR3 SINE MIR -34 174 98 1 641 1073 136 22 49 chrX 7415383 7415409 -159234887 - B2_Mm2 SINE B2 -14 181 160 1 641 285 29 0 0 chrX 7415409 7415443 -159234853 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1 641 1073 136 22 49 chrX 7415443 7415601 -159234695 - B2_Mm2 SINE B2 -36 159 2 1 641 1164 88 0 0 chrX 7415759 7415906 -159234390 + B1_Mus2 SINE Alu 1 147 0 1 641 1107 41 0 121 chrX 7415925 7416091 -159234205 + B1_Mm SINE Alu 2 147 0 1 641 243 103 0 0 chrX 7416091 7416130 -159234166 + (A)n Simple_repeat Simple_repeat 1 39 0 1 641 203 0 0 36 chrX 7416133 7416161 -159234135 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 1 641 402 95 57 45 chrX 7416174 7416262 -159234034 + L1Md_F2 LINE L1 6494 6582 0 1 641 326 332 111 41 chrX 7416275 7416974 -159233322 - L2b LINE L2 -240 3135 2376 1 641 312 107 107 0 chrX 7417245 7417320 -159232976 + CT-rich Low_complexity Low_complexity 5 87 0 1 641 732 195 88 116 chrX 7417338 7417553 -159232743 - B3 SINE B2 -7 209 1 1 641 968 88 88 0 chrX 7417840 7417977 -159232319 + B1_Mur4 SINE Alu 2 150 0 1 641 180 0 0 0 chrX 7418200 7418220 -159232076 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1 641 27 49 0 0 chrX 7419299 7419340 -159230956 + GC_rich Low_complexity Low_complexity 1 41 0 1 641 333 0 0 0 chrX 7420635 7420672 -159229624 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 641 324 200 0 0 chrX 7420698 7420768 -159229528 + (TATATG)n Simple_repeat Simple_repeat 6 75 0 1 641 1115 90 7 0 chrX 7421970 7422115 -159228181 - B1_Mus1 SINE Alu -2 146 1 1 641 547 167 161 31 chrX 7422126 7422256 -159228040 - B1_Mus1 SINE Alu -1 147 1 1 641 187 353 0 0 chrX 7423220 7423271 -159227025 + MIRb SINE MIR 21 71 -197 1 641 252 59 0 0 chrX 7423507 7423541 -159226755 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 1 641 878 62 0 122 chrX 7423541 7423688 -159226608 - B1_Mus2 SINE Alu -13 134 6 1 641 348 216 46 146 chrX 7423574 7423704 -159226592 - B4 SINE B4 -94 198 82 1 641 725 158 14 61 chrX 7423766 7423914 -159226382 - B1_Mus2 SINE Alu -1 146 6 1 641 346 286 55 98 chrX 7423771 7423934 -159226362 - B4 SINE B4 -69 223 68 1 641 684 181 8 30 chrX 7424084 7424215 -159226081 - B1_Mus1 SINE Alu -16 132 5 1 641 576 235 0 9 chrX 7424335 7424451 -159225845 + PB1D7 SINE Alu 6 120 0 1 641 334 281 84 99 chrX 7424454 7424542 -159225754 - L1MB7 LINE L1 -58 6126 6049 1 641 1207 35 7 0 chrX 7424542 7424684 -159225612 - B1_Mus2 SINE Alu 0 147 5 1 641 334 281 84 99 chrX 7424684 7424927 -159225369 - L1MB7 LINE L1 -136 6048 5800 1 641 620 299 50 10 chrX 7425443 7425642 -159224654 - MLT1D LTR MaLR 0 505 299 1 641 1393 219 51 33 chrX 7425759 7426094 -159224202 - MTEa LTR MaLR -38 341 1 1 641 476 333 35 12 chrX 7426096 7426262 -159224034 - MTEa-int LTR MaLR -2 1578 1409 1 641 460 224 10 20 chrX 7426262 7426362 -159223934 + PB1D9 SINE Alu 2 100 -20 1 641 1251 239 59 11 chrX 7426361 7426648 -159223648 - MTEa-int LTR MaLR -198 1382 1082 1 641 985 142 59 0 chrX 7426672 7426767 -159223529 + URR1B DNA MER1_type 47 150 -75 1 641 1476 44 11 0 chrX 7426767 7426949 -159223347 - L1Md_T LINE L1 0 6582 6399 1 641 985 142 59 0 chrX 7426949 7427022 -159223274 + URR1B DNA MER1_type 151 224 -1 1 641 1094 278 214 33 chrX 7427023 7427543 -159222753 - MTEa-int LTR MaLR -491 1089 476 1 641 306 0 0 0 chrX 7427550 7427584 -159222712 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1 641 391 314 56 8 chrX 7427584 7427709 -159222587 - ID_B1 SINE B4 -12 212 82 1 641 1249 264 98 83 chrX 7427707 7427945 -159222351 - MTEa-int LTR MaLR -1063 517 283 1 641 1222 41 0 26 chrX 7427945 7428096 -159222200 + B1_Mm SINE Alu 1 147 0 1 641 1249 264 98 83 chrX 7428096 7428365 -159221931 - MTEa-int LTR MaLR -1298 282 2 1 641 1214 222 132 43 chrX 7428369 7428694 -159221602 - MTEa LTR MaLR -11 368 15 1 641 1156 51 0 0 chrX 7428697 7428835 -159221461 + B1_Mus2 SINE Alu 2 139 -8 1 641 275 224 165 0 chrX 7428895 7428980 -159221316 - MLT1D LTR MaLR -401 104 6 1 641 363 170 25 0 chrX 7429039 7429114 -159221182 + ERVL-B4-int LTR ERVL 4533 4621 -864 1 641 676 154 103 0 chrX 7429117 7429234 -159221062 + B1_Mur2 SINE Alu 10 138 -11 1 641 319 256 71 79 chrX 7429118 7429258 -159221038 + MT2B LTR ERVL 170 308 -293 1 641 1110 96 0 20 chrX 7429447 7429596 -159220700 - B1_Mus1 SINE Alu 0 148 3 1 641 232 299 84 56 chrX 7430119 7430261 -159220035 + MIRc SINE MIR 109 254 -14 1 641 274 221 57 29 chrX 7430743 7430813 -159219483 + RLTR25A LTR ERVK 501 572 -531 1 641 853 38 0 0 chrX 7430756 7430862 -159219434 + B1_Mm SINE Alu 42 147 0 1 641 285 201 3 52 chrX 7431221 7431287 -159219009 - PB1D9 SINE Alu -85 64 1 1 641 342 0 0 0 chrX 7431291 7431329 -159218967 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 641 234 0 0 0 chrX 7431329 7431354 -159218942 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 641 1420 73 0 6 chrX 7431354 7431534 -159218762 - B2_Mm2 SINE B2 -15 180 2 1 641 240 149 0 0 chrX 7432268 7432315 -159217981 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 1 641 1211 41 7 0 chrX 7432331 7432476 -159217820 - B1_Mm SINE Alu -1 146 1 1 641 1248 108 0 16 chrX 7432525 7432713 -159217583 - B2_Mm2 SINE B2 -10 185 1 1 641 1174 75 7 0 chrX 7432734 7432880 -159217416 - B1_Mus1 SINE Alu -1 147 1 1 641 364 250 25 74 chrX 7432885 7433006 -159217290 - L1MCa LINE L1 -4521 1987 1873 1 641 473 109 9 5 chrX 7433019 7433096 -159217200 - B2_Mm2 SINE B2 -136 80 2 1 641 845 131 0 21 chrX 7433812 7433953 -159216343 - B1_Mus2 SINE Alu -1 146 9 1 641 230 267 61 91 chrX 7433970 7434069 -159216227 - MIRb SINE MIR -109 159 64 1 641 622 216 36 7 chrX 7434181 7434321 -159215975 + B1_Mur2 SINE Alu 5 148 -1 1 641 398 64 333 9 chrX 7434501 7434609 -159215687 - B2_Mm2 SINE B2 -6 189 47 1 641 1186 101 59 0 chrX 7434670 7434839 -159215457 - B2_Mm1t SINE B2 -14 179 1 1 641 1251 48 0 13 chrX 7434867 7435016 -159215280 - B1_Mus1 SINE Alu 0 148 2 1 641 442 317 0 91 chrX 7435104 7435182 -159215114 - PB1D7 SINE Alu 0 120 50 1 641 1550 52 5 0 chrX 7435182 7435374 -159214922 - B2_Mm1t SINE B2 0 193 1 1 641 442 317 0 91 chrX 7435374 7435427 -159214869 - PB1D7 SINE Alu -71 49 1 1 641 601 225 78 0 chrX 7435441 7435570 -159214726 - B1_Mur3 SINE Alu -5 144 6 1 641 298 289 26 0 chrX 7436997 7437073 -159213223 + ID4 SINE ID 2 79 -4 1 641 485 190 176 25 chrX 7437138 7437257 -159213039 + URR1B DNA MER1_type 3 139 -86 1 641 192 40 0 0 chrX 7437263 7437288 -159213008 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 1 641 1244 42 0 0 chrX 7437289 7437431 -159212865 - B1_Mus1 SINE Alu -6 142 1 1 641 306 299 128 64 chrX 7437891 7438016 -159212280 - B1F2 SINE Alu -10 139 7 1 641 519 195 6 26 chrX 7438086 7438209 -159212087 - B1_Mus2 SINE Alu -22 127 12 1 641 358 270 22 11 chrX 7438131 7438221 -159212075 - ID_B1 SINE B4 -55 169 79 1 641 726 241 15 43 chrX 7438763 7438930 -159211366 - RSINE1 SINE B4 -4 161 2 1 641 612 317 14 27 chrX 7439076 7439222 -159211074 + RSINE1 SINE B4 12 155 -10 1 641 802 236 59 25 chrX 7439263 7439467 -159210829 + B3 SINE B2 1 211 -5 1 641 1241 54 0 0 chrX 7439977 7440124 -159210172 - B1_Mus1 SINE Alu 0 148 2 1 641 1391 69 6 0 chrX 7440743 7440917 -159209379 + B2_Mm1a SINE B2 1 175 -18 1 641 25 31 0 0 chrX 7440917 7440949 -159209347 + AT_rich Low_complexity Low_complexity 1 32 0 1 641 306 125 0 0 chrX 7441020 7441068 -159209228 + (TTA)n Simple_repeat Simple_repeat 2 49 0 1 641 756 168 48 0 chrX 7441068 7441193 -159209103 - B1_Mur4 SINE Alu -19 131 1 1 641 462 222 176 38 chrX 7441232 7441363 -159208933 + B1F1 SINE Alu 1 149 0 1 641 1223 41 0 7 chrX 7441607 7441754 -159208542 + B1_Mus2 SINE Alu 2 147 0 1 641 686 137 124 44 chrX 7441965 7442102 -159208194 - B1_Mur2 SINE Alu 0 149 2 1 641 267 304 63 0 chrX 7442250 7442344 -159207952 - MIRb SINE MIR -97 171 72 1 641 196 301 52 41 chrX 7443291 7443388 -159206908 - MIRb SINE MIR -55 213 116 1 641 714 175 15 31 chrX 7443478 7443608 -159206688 + B1_Mur3 SINE Alu 1 128 -21 1 641 272 212 79 101 chrX 7443650 7443739 -159206557 + MT2B LTR ERVL 154 240 -361 1 641 743 209 22 0 chrX 7443664 7443803 -159206493 + B1_Mur2 SINE Alu 8 149 0 1 641 219 253 55 105 chrX 7443839 7443947 -159206349 - PB1D10 SINE Alu -28 121 12 1 641 565 148 261 34 chrX 7443952 7444071 -159206225 - B1_Mus2 SINE Alu -1 146 1 1 641 464 194 188 36 chrX 7444129 7444241 -159206055 - RSINE1 SINE B4 -34 131 3 1 641 275 252 126 72 chrX 7444310 7444421 -159205875 - PB1D10 SINE Alu 0 117 1 1 641 300 355 0 31 chrX 7445657 7445817 -159204479 + C-rich Low_complexity Low_complexity 3 157 0 1 641 351 264 288 4 chrX 7445942 7446182 -159204114 - L1MC3 LINE L1 -20 7765 7458 1 641 285 216 10 58 chrX 7446209 7446312 -159203984 - L1MC3 LINE L1 -1848 5937 5840 1 641 336 290 221 17 chrX 7446599 7446771 -159203525 - L1MC3 LINE L1 -318 7467 7261 1 641 2015 248 136 36 chrX 7446864 7447884 -159202412 - L1MC3 LINE L1 -1203 6582 5461 1 641 213 271 119 0 chrX 7448053 7448112 -159202184 - ID4_ SINE ID -3 80 15 1 641 394 268 9 35 chrX 7448252 7448368 -159201928 + PB1D10 SINE Alu 5 117 0 1 641 566 193 57 32 chrX 7448448 7448571 -159201725 + B1F SINE Alu 17 142 -7 1 641 253 344 95 66 chrX 7449859 7450133 -159200163 - L2a LINE L2 -10 3416 3135 1 641 377 329 73 40 chrX 7450218 7450465 -159199831 - L2a LINE L2 -468 2951 2697 1 641 187 286 99 54 chrX 7451205 7451316 -159198980 - L2a LINE L2 -3040 379 264 1 641 213 271 0 33 chrX 7451544 7451605 -159198691 + CT-rich Low_complexity Low_complexity 1 59 0 1 641 469 178 54 36 chrX 7452671 7452782 -159197514 + PB1D9 SINE Alu 1 113 -7 1 641 255 249 131 123 chrX 7453252 7453504 -159196792 + MIR SINE MIR 1 254 -8 1 641 449 274 32 0 chrX 7454511 7454606 -159195690 - RSINE1 SINE B4 -1 164 67 1 641 251 114 44 22 chrX 7454628 7454673 -159195623 - PB1 SINE Alu -2 125 80 1 641 201 108 0 0 chrX 7456335 7456372 -159193924 + (A)n Simple_repeat Simple_repeat 1 37 0 1 641 290 271 14 0 chrX 7456388 7456458 -159193838 + ID4_ SINE ID 5 75 -8 1 641 188 244 0 0 chrX 7457416 7457456 -159192840 - MIR SINE MIR -14 254 218 1 641 421 279 0 35 chrX 7457490 7457605 -159192691 + PB1D7 SINE Alu 1 111 -9 1 641 336 216 124 0 chrX 7458017 7458114 -159192182 + PB1D9 SINE Alu 3 111 -9 1 641 328 289 131 8 chrX 7462420 7462542 -159187754 + MIR SINE MIR 118 254 -8 1 641 333 222 167 0 chrX 7463298 7463388 -159186908 + ID_B1 SINE B4 119 223 -1 1 641 733 155 144 23 chrX 7463604 7463736 -159186560 - B1_Mus1 SINE Alu 0 148 1 1 641 227 368 11 0 chrX 7463737 7463824 -159186472 + PB1 SINE Alu 13 100 -27 1 641 1245 41 0 0 chrX 7463835 7463982 -159186314 - B1_Mus1 SINE Alu 0 148 2 1 641 585 289 101 5 chrX 7464059 7464257 -159186039 + ID_B1 SINE B4 4 220 -4 1 641 363 231 108 27 chrX 7464303 7464414 -159185882 + PB1D7 SINE Alu 1 120 0 1 641 303 194 88 15 chrX 7464436 7464504 -159185792 + ID_B1 SINE B4 80 152 -72 1 641 455 224 0 30 chrX 7464448 7464549 -159185747 + PB1D10 SINE Alu 17 114 -3 1 641 499 308 37 49 chrX 7464551 7464715 -159185581 + RSINE1 SINE B4 3 164 -1 1 641 214 377 29 29 chrX 7464561 7464733 -159185563 + B3A SINE B2 12 183 -15 1 641 302 270 0 0 chrX 7464741 7464804 -159185492 + ID4 SINE ID 5 67 -16 1 641 306 73 0 0 chrX 7464810 7464851 -159185445 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 641 381 236 80 195 chrX 7464860 7465060 -159185236 + B4A SINE B4 3 179 -113 1 641 494 159 224 26 chrX 7465083 7465199 -159185097 + B1_Mus1 SINE Alu 1 139 -9 1 641 1171 44 0 0 chrX 7465418 7465554 -159184742 - B1_Mus1 SINE Alu -8 140 5 1 641 893 189 59 93 chrX 7465557 7465761 -159184535 + B3 SINE B2 13 209 -7 1 641 256 333 14 0 chrX 7466217 7466286 -159184010 - ID4_ SINE ID 0 83 14 1 641 1201 61 0 0 chrX 7466287 7466434 -159183862 - B1_Mus1 SINE Alu 0 148 2 1 641 768 167 129 0 chrX 7466444 7466576 -159183720 - B1_Mur1 SINE Alu 0 149 1 1 641 239 343 14 0 chrX 7467086 7467156 -159183140 + PB1D10 SINE Alu 2 72 -45 1 641 955 195 75 0 chrX 7467171 7467345 -159182951 + B3 SINE B2 15 201 -15 1 641 811 157 42 14 chrX 7467523 7467665 -159182631 + B1_Mur3 SINE Alu 3 148 -1 1 641 1469 65 16 0 chrX 7467672 7467856 -159182440 + B2_Mm2 SINE B2 1 187 -8 1 641 280 277 12 12 chrX 7467889 7467973 -159182323 + MIR SINE MIR 51 134 -128 1 641 324 316 204 13 chrX 7468006 7468163 -159182133 - ID_B1 SINE B4 -33 191 5 1 641 333 62 0 0 chrX 7468163 7468211 -159182085 + (TTTG)n Simple_repeat Simple_repeat 3 50 0 1 641 372 253 105 0 chrX 7468211 7468306 -159181990 - PB1D10 SINE Alu -12 105 1 1 641 191 396 9 0 chrX 7468306 7468412 -159181884 + MIR SINE MIR 126 232 -30 1 641 1201 117 37 16 chrX 7468490 7468681 -159181615 - B2_Mm2 SINE B2 0 195 1 1 641 213 342 33 6 chrX 7468706 7468813 -159181483 - MIRc SINE MIR -38 170 61 1 641 724 241 117 30 chrX 7468876 7469073 -159181223 - ID_B1 SINE B4 -3 221 8 1 641 237 308 51 36 chrX 7469254 7469392 -159180904 - MER45R DNA Tip100 -1113 468 329 1 641 189 211 0 0 chrX 7470919 7470971 -159179325 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 642 1235 48 0 7 chrX 7472036 7472183 -159178113 + B1_Mus2 SINE Alu 2 147 0 1 642 225 132 0 0 chrX 7472537 7472575 -159177721 + (T)n Simple_repeat Simple_repeat 1 38 0 1 642 1149 68 7 0 chrX 7472575 7472721 -159177575 - B1_Mus2 SINE Alu 0 147 1 1 642 184 213 21 21 chrX 7473975 7474023 -159176273 + MIRb SINE MIR 215 262 -6 1 642 1541 68 0 5 chrX 7474433 7474625 -159175671 - B2_Mm2 SINE B2 -4 191 1 1 642 180 256 0 0 chrX 7474659 7474702 -159175594 + MIR SINE MIR 219 261 -1 1 642 607 252 0 0 chrX 7474810 7474929 -159175367 + B1_Mur1 SINE Alu 22 140 -9 1 642 284 331 36 88 chrX 7474814 7475006 -159175290 + B4A SINE B4 111 292 0 1 642 320 202 147 63 chrX 7475043 7475138 -159175158 - B1F1 SINE Alu -40 109 7 1 642 402 275 8 24 chrX 7475153 7475276 -159175020 - PB1 SINE Alu -2 125 5 1 642 495 0 0 0 chrX 7475841 7475896 -159174400 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 642 786 97 79 24 chrX 7477194 7477321 -159172975 - B1_Mus1 SINE Alu -13 135 2 1 642 498 162 10 29 chrX 7477716 7477818 -159172478 - PB1D9 SINE Alu -1 119 20 1 642 442 245 45 9 chrX 7477825 7477936 -159172360 - PB1D7 SINE Alu -5 115 1 1 642 868 137 23 8 chrX 7478578 7478710 -159171586 + B1_Mur4 SINE Alu 5 138 -12 1 642 351 65 0 0 chrX 7478772 7478818 -159171478 + (T)n Simple_repeat Simple_repeat 1 46 0 1 642 1131 88 0 20 chrX 7478818 7478968 -159171328 - B1_Mus1 SINE Alu 0 148 2 1 642 319 241 106 89 chrX 7479068 7479191 -159171105 + B4A SINE B4 90 214 -78 1 642 305 302 46 11 chrX 7479257 7479344 -159170952 - B1F1 SINE Alu -59 90 1 1 642 1202 55 7 0 chrX 7479622 7479767 -159170529 - B1_Mm SINE Alu 0 147 2 1 642 214 195 0 0 chrX 7479786 7479827 -159170469 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1 642 806 156 8 6 chrX 7479871 7480020 -159170276 - Lx4A LINE L1 -121 6929 6785 1 642 928 120 0 0 chrX 7480020 7480153 -159170143 - B1_Mur4 SINE Alu -6 144 12 1 642 978 162 34 106 chrX 7480158 7480393 -159169903 - URR1B DNA MER1_type -7 218 1 1 642 302 218 49 37 chrX 7480634 7480715 -159169581 - ID4 SINE ID -1 82 1 1 642 753 138 53 80 chrX 7481019 7481169 -159169127 - B1_Mur3 SINE Alu -1 148 3 1 642 1300 34 0 0 chrX 7481302 7481449 -159168847 - B1_Mm SINE Alu 0 147 1 1 642 922 249 52 5 chrX 7481597 7481807 -159168489 + ID_B1 SINE B4 1 220 -4 1 642 890 116 0 0 chrX 7482232 7482353 -159167943 + B1_Mus1 SINE Alu 19 139 -9 1 642 1255 48 0 0 chrX 7482428 7482575 -159167721 + B1_Mus2 SINE Alu 1 147 0 1 642 1143 56 0 0 chrX 7482608 7482750 -159167546 + B1_Mus2 SINE Alu 6 147 0 1 642 198 167 0 0 chrX 7482750 7482786 -159167510 + A-rich Low_complexity Low_complexity 1 36 0 1 642 249 247 125 38 chrX 7482930 7483010 -159167286 - PB1D10 SINE Alu -7 110 24 1 642 1163 69 14 0 chrX 7484158 7484303 -159165993 + B1_Mus2 SINE Alu 1 147 0 1 642 617 181 19 94 chrX 7484612 7484771 -159165525 + B1_Mur3 SINE Alu 3 149 0 1 642 1253 34 14 0 chrX 7484809 7484955 -159165341 + B1_Mus1 SINE Alu 1 148 0 1 642 26 50 0 0 chrX 7485088 7485128 -159165168 + AT_rich Low_complexity Low_complexity 1 40 0 1 642 573 187 0 27 chrX 7485207 7485317 -159164979 - B1_Mus1 SINE Alu -6 142 36 1 642 216 211 0 0 chrX 7485448 7485486 -159164810 - B1_Mus2 SINE Alu -109 38 1 1 642 420 208 26 94 chrX 7485491 7485608 -159164688 - ID_B1 SINE B4 -2 222 114 1 642 1402 75 32 0 chrX 7485665 7485851 -159164445 + B2_Mm1t SINE B2 2 193 0 1 642 237 316 117 13 chrX 7485869 7485946 -159164350 - PB1D9 SINE Alu -13 107 23 1 642 496 169 138 58 chrX 7485951 7486089 -159164207 - B1_Mur4 SINE Alu 0 150 2 1 642 827 188 71 16 chrX 7486117 7486301 -159163995 - B2_Mm2 SINE B2 0 195 2 1 642 1245 61 0 0 chrX 7486303 7486450 -159163846 - B1_Mm SINE Alu 0 147 1 1 642 216 0 0 0 chrX 7486631 7486655 -159163641 + (GTTTG)n Simple_repeat Simple_repeat 3 26 0 1 642 1191 48 14 0 chrX 7486656 7486801 -159163495 - B1_Mus1 SINE Alu -1 147 1 1 642 389 272 152 41 chrX 7487219 7487514 -159162782 + L1MA5A LINE L1 5576 5903 -394 1 642 609 313 18 30 chrX 7488037 7488205 -159162091 - ID_B1 SINE B4 -57 167 2 1 642 508 248 92 0 chrX 7488393 7488502 -159161794 + B1_Mur2 SINE Alu 2 120 -29 1 642 288 235 11 56 chrX 7488776 7488866 -159161430 + B4 SINE B4 1 86 -206 1 642 1193 35 0 20 chrX 7488937 7489084 -159161212 - B1_Mus1 SINE Alu -4 144 1 1 642 1128 63 0 7 chrX 7489433 7489576 -159160720 - B1_Mm SINE Alu -4 143 2 1 642 297 0 0 0 chrX 7489720 7489753 -159160543 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 642 1281 306 107 21 chrX 7489945 7490422 -159159874 - MER21B LTR ERV1 -345 518 1 1 642 1424 44 49 22 chrX 7490428 7490613 -159159683 + B2_Mm1t SINE B2 1 190 -3 1 642 1429 81 16 0 chrX 7490621 7490806 -159159490 + B2_Mm2 SINE B2 1 188 -7 1 642 564 89 0 0 chrX 7490913 7490992 -159159304 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 642 560 251 35 92 chrX 7490992 7491220 -159159076 - ID_B1 SINE B4 -9 215 1 1 642 292 329 13 0 chrX 7491239 7491315 -159158981 - ID4 SINE ID 0 83 7 1 642 26 50 0 0 chrX 7491446 7491486 -159158810 + AT_rich Low_complexity Low_complexity 1 40 0 1 642 315 310 19 12 chrX 7491494 7491593 -159158703 + ID4 SINE ID 2 104 -48 1 642 284 188 31 15 chrX 7491624 7491689 -159158607 + ID2 SINE ID 18 83 0 1 642 408 297 67 45 chrX 7491708 7491842 -159158454 - B1F2 SINE Alu -12 137 1 1 642 267 318 0 0 chrX 7491854 7491920 -159158376 + ID4 SINE ID 5 70 -13 1 642 267 373 45 0 chrX 7491965 7492075 -159158221 + PB1 SINE Alu 3 117 -10 1 642 378 0 0 0 chrX 7492133 7492175 -159158121 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 1 642 894 60 9 0 chrX 7492175 7492291 -159158005 - B1_Mm SINE Alu -30 117 1 1 642 516 211 51 72 chrX 7492291 7492317 -159157979 - B4 SINE B4 -200 92 70 1 642 1231 55 0 7 chrX 7492384 7492532 -159157764 + B1_Mus2 SINE Alu 1 147 0 1 642 189 0 0 0 chrX 7492558 7492579 -159157717 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 1 642 30 27 0 0 chrX 7492660 7492697 -159157599 + AT_rich Low_complexity Low_complexity 1 37 0 1 642 793 95 0 41 chrX 7492767 7492888 -159157408 - B1_Mus1 SINE Alu -1 147 32 1 642 840 200 129 21 chrX 7492896 7493090 -159157206 - B3 SINE B2 -1 215 1 1 642 990 80 29 0 chrX 7493120 7493257 -159157039 - B1_Mur4 SINE Alu -1 149 9 1 642 418 302 62 57 chrX 7493145 7493338 -159156958 - MT2B LTR ERVL -323 278 85 1 642 463 252 78 117 chrX 7493257 7493295 -159157001 - B4A SINE B4 -62 225 58 1 642 200 189 0 0 chrX 7493499 7493536 -159156760 + GA-rich Low_complexity Low_complexity 1 37 0 1 642 382 325 91 87 chrX 7493536 7493755 -159156541 - MLT1F1 LTR MaLR -91 589 282 1 642 382 152 7 64 chrX 7493760 7493861 -159156435 + B1_Mur3 SINE Alu 21 148 -1 1 642 238 366 0 61 chrX 7493988 7494087 -159156209 - MLT1F1 LTR MaLR -561 93 1 1 642 475 252 35 49 chrX 7494141 7494283 -159156013 - B1F2 SINE Alu -9 140 1 1 642 270 254 234 21 chrX 7494387 7494408 -159155888 - B4A SINE B4 -42 250 163 1 642 538 204 10 0 chrX 7494408 7494511 -159155785 - PB1D10 SINE Alu -1 116 13 1 642 270 254 234 21 chrX 7494511 7494528 -159155768 - B4A SINE B4 -42 162 80 1 642 204 262 0 55 chrX 7494533 7494568 -159155728 + T-rich Low_complexity Low_complexity 75 105 0 1 642 875 171 14 0 chrX 7494568 7494708 -159155588 - B1_Mur1 SINE Alu -7 142 1 1 642 204 262 0 55 chrX 7494708 7494781 -159155515 + T-rich Low_complexity Low_complexity 4 74 0 1 642 218 254 220 0 chrX 7494961 7495020 -159155276 - ID2 SINE ID -9 74 3 1 642 629 205 0 146 chrX 7495068 7495120 -159155176 - B1_Mur3 SINE Alu -3 146 108 1 642 684 0 0 0 chrX 7495120 7495196 -159155100 + (TTTC)n Simple_repeat Simple_repeat 2 77 0 1 642 1071 100 99 12 chrX 7495204 7495366 -159154930 - B2_Mm2 SINE B2 -18 177 2 1 642 631 167 0 16 chrX 7495366 7495475 -159154821 - B1_Mur2 SINE Alu -42 107 1 1 642 435 244 52 52 chrX 7495572 7495706 -159154590 - ID_B1 SINE B4 -10 214 81 1 642 244 268 5 13 chrX 7495871 7495949 -159154347 - PB1 SINE Alu -8 141 69 1 642 572 224 45 14 chrX 7495961 7496101 -159154195 + B1_Mur4 SINE Alu 5 149 -1 1 642 493 260 10 0 chrX 7496120 7496220 -159154076 - ID_B1 SINE B4 -119 105 5 1 642 402 221 46 37 chrX 7496216 7496324 -159153972 - B1F2 SINE Alu -40 109 1 1 642 21 0 0 0 chrX 7497078 7497099 -159153197 + GC_rich Low_complexity Low_complexity 1 21 0 1 642 225 0 0 0 chrX 7498008 7498033 -159152263 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 642 313 319 40 74 chrX 7498399 7498575 -159151721 - L1ME3B LINE L1 -372 5868 5699 1 642 593 178 87 22 chrX 7498678 7498816 -159151480 - B1_Mus2 SINE Alu 0 147 1 1 642 663 204 53 8 chrX 7500941 7501074 -159149222 - B1_Mur2 SINE Alu -10 139 1 1 642 651 236 42 14 chrX 7501103 7501245 -159149051 + B1_Mur3 SINE Alu 2 147 -2 2 642 245 119 47 23 chrX 7501277 7501320 -159148976 - B1_Mur2 SINE Alu -7 142 99 3 642 249 179 107 0 chrX 7501316 7501372 -159148924 + PB1D9 SINE Alu 54 115 -5 4 642 506 296 7 0 chrX 7502467 7502602 -159147694 - B1F2 SINE Alu -13 136 1 5 642 1249 34 0 13 chrX 7502766 7502916 -159147380 - B1_Mus1 SINE Alu 0 148 1 6 642 235 302 0 0 chrX 7503008 7503061 -159147235 - RSINE1 SINE B4 -13 152 100 7 642 637 269 43 0 chrX 7503455 7503596 -159146700 + ID_B1 SINE B4 41 187 -37 8 642 328 286 36 109 chrX 7503499 7503609 -159146687 + PB1D10 SINE Alu 7 108 -9 9 642 228 212 0 29 chrX 7503808 7503876 -159146420 + (TAA)n Simple_repeat Simple_repeat 1 66 0 1 642 409 158 0 50 chrX 7503923 7504003 -159146293 + PB1D9 SINE Alu 45 120 0 1 642 243 274 46 28 chrX 7504225 7504334 -159145962 - L2a LINE L2 -67 3359 3249 1 642 216 294 0 0 chrX 7504330 7504381 -159145915 + MIR SINE MIR 212 262 0 1 642 235 312 24 59 chrX 7506170 7506255 -159144041 + MLT1J LTR MaLR 106 187 -325 1 642 271 346 80 36 chrX 7506306 7506382 -159143914 + ID_B1 SINE B4 71 157 -67 1 642 683 204 222 0 chrX 7506382 7506544 -159143752 + B3 SINE B2 2 199 -17 1 642 271 346 80 36 chrX 7506544 7506605 -159143691 + ID_B1 SINE B4 158 214 -10 1 642 421 243 173 27 chrX 7506903 7507013 -159143283 - B1_Mur1 SINE Alu -21 128 3 1 642 227 312 100 0 chrX 7509623 7509703 -159140593 - MIR SINE MIR -4 258 171 1 642 334 282 51 40 chrX 7509904 7510041 -159140255 - MIR SINE MIR -117 151 13 1 642 1202 82 0 0 chrX 7510192 7510339 -159139957 - B1_Mus2 SINE Alu 0 147 1 1 642 191 258 143 4 chrX 7510632 7510711 -159139585 + MIR SINE MIR 45 129 -133 2 642 335 238 67 67 chrX 7510713 7510848 -159139448 + YREP_Mm Unknown Unknown 162 296 -1516 2 642 731 188 22 8 chrX 7510734 7510868 -159139428 - ID_B1 SINE B4 -7 217 82 2 642 1262 28 0 0 chrX 7511034 7511179 -159139117 + B1_Mus2 SINE Alu 1 145 -2 2 642 385 33 29 116 chrX 7511569 7511638 -159138658 + B1_Mm SINE Alu 84 146 -1 2 642 723 104 0 0 chrX 7511638 7511744 -159138552 + (GGGA)n Simple_repeat Simple_repeat 3 108 0 2 642 855 195 37 12 chrX 7511857 7512018 -159138278 + B3 SINE B2 1 165 -51 2 642 387 0 0 0 chrX 7512018 7512061 -159138235 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 642 423 0 0 0 chrX 7512561 7512608 -159137688 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 642 1265 106 33 0 chrX 7515836 7516016 -159134280 + B2_Mm2 SINE B2 3 188 -7 2 642 541 232 182 22 chrX 7516043 7516224 -159134072 - B3 SINE B2 -6 210 1 3 642 506 241 93 33 chrX 7516361 7516511 -159133785 + RSINE1 SINE B4 4 162 -3 3 642 1102 122 64 32 chrX 7517342 7517529 -159132767 - B2_Mm2 SINE B2 -1 194 2 3 642 23 0 0 0 chrX 7517834 7517857 -159132439 + AT_rich Low_complexity Low_complexity 1 23 0 3 642 484 262 103 28 chrX 7517857 7518002 -159132294 - ID_B1 SINE B4 -67 157 2 3 642 1270 48 0 0 chrX 7518024 7518171 -159132125 - B1_Mm SINE Alu 0 147 1 3 642 256 211 49 62 chrX 7518202 7518283 -159132013 - B3 SINE B2 0 216 137 3 642 612 191 89 30 chrX 7518322 7518457 -159131839 - B1_Mur3 SINE Alu -6 143 1 3 642 680 220 69 28 chrX 7518474 7518619 -159131677 - RSINE1 SINE B4 -14 151 1 3 642 498 236 0 28 chrX 7519477 7519586 -159130710 + PB1D10 SINE Alu 12 117 0 3 642 585 246 22 36 chrX 7520313 7520452 -159129844 - ID_B1 SINE B4 0 224 88 4 642 408 267 147 0 chrX 7521395 7521511 -159128785 - ID_B1 SINE B4 -7 217 85 4 642 202 29 28 28 chrX 7521525 7521561 -159128735 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 4 642 321 332 113 57 chrX 7522154 7522604 -159127692 + L2a LINE L2 2742 3215 -211 4 642 332 341 109 26 chrX 7522885 7523198 -159127098 - L2 LINE L2 -357 3062 2724 4 642 578 248 40 0 chrX 7523336 7523461 -159126835 + B1F SINE Alu 1 130 -19 4 642 204 194 149 0 chrX 7525840 7525900 -159124396 + MIRm SINE MIR 87 154 -108 4 642 239 286 99 0 chrX 7526382 7526473 -159123823 - MER58C DNA MER1_type 0 215 116 4 642 415 237 21 0 chrX 7526465 7526558 -159123738 - PB1 SINE Alu -3 124 30 4 642 1206 68 0 0 chrX 7526643 7526791 -159123505 - B1_Mus1 SINE Alu 0 148 1 4 642 225 0 0 0 chrX 7526830 7526855 -159123441 + (T)n Simple_repeat Simple_repeat 1 25 0 5 642 1139 101 0 0 chrX 7526855 7527003 -159123293 - B1_Mus1 SINE Alu 0 148 1 5 642 225 24 23 45 chrX 7527022 7527066 -159123230 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 5 642 1092 88 0 0 chrX 7527066 7527203 -159123093 - B1_Mus1 SINE Alu -10 138 2 5 642 644 156 6 203 chrX 7528018 7528195 -159122101 - B1_Mur2 SINE Alu -6 143 2 5 642 367 265 10 10 chrX 7528215 7528314 -159121982 - B3A SINE B2 -41 157 59 5 642 374 78 39 0 chrX 7528451 7528502 -159121794 + MTC LTR MaLR 68 120 -301 5 642 1675 258 43 19 chrX 7528574 7529135 -159121161 - Lx6 LINE L1 -27 7433 6503 5 642 1844 154 15 21 chrX 7529153 7529479 -159120817 + MTC LTR MaLR 98 421 0 5 642 2855 157 75 198 chrX 7529478 7529819 -159120477 + MTC-int LTR MaLR 2 392 -866 5 642 1291 80 17 11 chrX 7529819 7529997 -159120299 + B2_Mm2 SINE B2 2 180 -15 5 642 2855 157 75 198 chrX 7529997 7530546 -159119750 + MTC-int LTR MaLR 393 783 -475 5 642 385 190 12 25 chrX 7530890 7530971 -159119325 - ID4 SINE ID -1 82 3 6 642 233 282 8 0 chrX 7531058 7531182 -159119114 + ORR1B1-int LTR MaLR 630 754 -755 6 642 969 75 0 29 chrX 7531085 7531223 -159119073 + B1_Mus1 SINE Alu 12 145 -3 6 642 219 36 0 0 chrX 7531223 7531251 -159119045 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 6 642 933 313 26 26 chrX 7531965 7532020 -159118276 - B4 SINE B4 -14 278 222 6 642 1379 125 5 0 chrX 7532020 7532212 -159118084 - B2_Mm1t SINE B2 0 193 1 6 642 933 313 26 26 chrX 7532212 7532425 -159117871 - B4 SINE B4 -71 221 10 6 642 233 20 39 58 chrX 7532433 7532485 -159117811 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 6 642 1067 52 14 42 chrX 7532485 7532627 -159117669 - B1_Mus1 SINE Alu -10 138 1 6 642 486 219 20 40 chrX 7532631 7532731 -159117565 - PB1 SINE Alu -2 125 28 6 642 696 122 0 0 chrX 7533217 7533315 -159116981 + B1_Mus2 SINE Alu 9 106 -41 6 642 1159 65 0 0 chrX 7533364 7533502 -159116794 + B1_Mus1 SINE Alu 5 142 -6 7 642 239 245 71 54 chrX 7533553 7533665 -159116631 - PB1 SINE Alu -8 119 6 7 642 660 200 116 104 chrX 7533570 7533743 -159116553 - ID_B1 SINE B4 -116 176 2 7 642 1411 87 11 0 chrX 7534296 7534481 -159115815 - B2_Mm1t SINE B2 -6 187 1 7 642 928 210 70 0 chrX 7534482 7534668 -159115628 - B3 SINE B2 -17 199 1 7 642 532 235 128 8 chrX 7534676 7534809 -159115487 - B1_Mur1 SINE Alu 0 149 1 7 642 565 164 101 72 chrX 7535275 7535413 -159114883 + B1F SINE Alu 3 144 -5 7 642 319 156 0 49 chrX 7535522 7535603 -159114693 + GA-rich Low_complexity Low_complexity 1 77 0 7 642 387 0 0 0 chrX 7535900 7535943 -159114353 + (TC)n Simple_repeat Simple_repeat 1 43 0 7 642 768 193 29 0 chrX 7536527 7536667 -159113629 + B1F1 SINE Alu 4 147 -2 7 642 549 261 52 15 chrX 7536701 7536837 -159113459 + ID_B1 SINE B4 80 220 -4 8 642 213 214 0 0 chrX 7537974 7538016 -159112280 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 8 642 878 120 22 8 chrX 7538017 7538151 -159112145 - B1_Mur4 SINE Alu -13 137 2 8 642 498 256 32 24 chrX 7538244 7538368 -159111928 + B1F2 SINE Alu 24 148 -1 8 642 1726 16 0 0 chrX 7538579 7538771 -159111525 - B2_Mm1t SINE B2 0 193 2 8 642 1247 54 0 0 chrX 7538805 7538952 -159111344 - B1_Mus1 SINE Alu 0 148 2 8 642 367 137 0 27 chrX 7540413 7540462 -159109834 + T-rich Low_complexity Low_complexity 30 77 0 8 642 1247 54 0 0 chrX 7540462 7540610 -159109686 - B1_Mus1 SINE Alu 0 148 1 8 642 367 137 0 27 chrX 7540610 7540635 -159109661 + T-rich Low_complexity Low_complexity 5 29 0 8 642 340 292 19 40 chrX 7540849 7541193 -159109103 + CT-rich Low_complexity Low_complexity 1 336 0 8 642 411 21 0 0 chrX 7541780 7541828 -159108468 + (CAGT)n Simple_repeat Simple_repeat 1 48 0 9 642 546 16 0 0 chrX 7541828 7541890 -159108406 + (TCTA)n Simple_repeat Simple_repeat 2 64 0 9 642 295 283 156 8 chrX 7541890 7542018 -159108278 - B4 SINE B4 -21 271 125 9 642 203 344 6 38 chrX 7542684 7542844 -159107452 + CT-rich Low_complexity Low_complexity 3 157 0 9 642 639 136 0 0 chrX 7542854 7542964 -159107332 + (TTTC)n Simple_repeat Simple_repeat 4 113 0 9 642 219 317 10 29 chrX 7543002 7543074 -159107222 + polypyrimidine Low_complexity Low_complexity 35 103 0 9 642 1273 40 0 0 chrX 7543074 7543222 -159107074 - B1_Mus1 SINE Alu 0 148 1 9 642 219 317 10 29 chrX 7543222 7543253 -159107043 + polypyrimidine Low_complexity Low_complexity 3 34 0 9 642 1169 68 0 0 chrX 7543842 7543988 -159106308 + B1_Mm SINE Alu 1 146 -1 9 642 200 59 29 0 chrX 7544494 7544528 -159105768 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 9 642 292 268 0 0 chrX 7544989 7545060 -159105236 + CT-rich Low_complexity Low_complexity 1 71 0 1 642 263 300 65 32 chrX 7545291 7545415 -159104881 - MIRb SINE MIR -23 245 118 1 642 542 140 10 0 chrX 7545881 7545981 -159104315 + (GGGA)n Simple_repeat Simple_repeat 1 101 0 1 642 211 194 0 0 chrX 7546151 7546187 -159104109 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 642 187 268 54 0 chrX 7546454 7546510 -159103786 - MIR3 SINE MIR -46 162 104 1 642 1250 42 0 0 chrX 7546662 7546805 -159103491 + B1_Mus2 SINE Alu 1 143 -4 1 642 186 71 0 0 chrX 7546807 7546835 -159103461 + (A)n Simple_repeat Simple_repeat 1 28 0 1 642 298 304 13 0 chrX 7547727 7547806 -159102490 - ID SINE ID -142 82 3 1 642 314 236 13 53 chrX 7547869 7547945 -159102351 - ID SINE ID -151 73 1 1 642 219 69 0 0 chrX 7549009 7549038 -159101258 + (TATG)n Simple_repeat Simple_repeat 4 32 0 1 642 278 333 0 9 chrX 7549038 7549147 -159101149 - L1MA5 LINE L1 -15 6285 6178 1 642 640 190 80 0 chrX 7549331 7549468 -159100828 + ID_B1 SINE B4 77 224 0 1 642 772 196 58 7 chrX 7549471 7549625 -159100671 + B3 SINE B2 49 210 -6 1 642 728 228 0 26 chrX 7549830 7549983 -159100313 - B1_Mur1 SINE Alu 0 149 1 1 642 833 187 33 122 chrX 7549985 7550198 -159100098 - B3 SINE B2 -1 194 1 1 642 1158 62 14 0 chrX 7550359 7550503 -159099793 + B1_Mm SINE Alu 2 147 0 1 642 27 0 0 0 chrX 7550505 7550532 -159099764 + AT_rich Low_complexity Low_complexity 1 27 0 1 642 222 292 108 0 chrX 7550551 7550616 -159099680 + ID4 SINE ID 2 73 -10 1 642 226 258 113 0 chrX 7550560 7550622 -159099674 + tRNA-Ala-GCY_ tRNA tRNA 5 73 -2 1 642 296 115 0 16 chrX 7550700 7550710 -159099586 + (CAAA)n Simple_repeat Simple_repeat 2 11 0 1 642 1177 61 0 13 chrX 7550710 7550859 -159099437 + B1_Mus1 SINE Alu 2 148 0 1 642 296 115 0 16 chrX 7550859 7550910 -159099386 + (CAAA)n Simple_repeat Simple_repeat 4 53 0 1 642 558 195 44 9 chrX 7550942 7551056 -159099240 - PB1D7 SINE Alu -2 118 1 1 642 804 150 42 28 chrX 7551507 7551651 -159098645 - B1_Mur4 SINE Alu -2 148 3 1 642 180 0 0 0 chrX 7551667 7551687 -159098609 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 642 1261 34 7 0 chrX 7551787 7551933 -159098363 + B1_Mus2 SINE Alu 1 147 0 1 642 198 103 0 0 chrX 7552186 7552215 -159098081 + (T)n Simple_repeat Simple_repeat 1 29 0 1 642 1150 98 0 0 chrX 7552220 7552363 -159097933 - B1_Mus2 SINE Alu -4 143 1 1 642 1333 57 91 0 chrX 7552421 7552597 -159097699 - B2_Mm2 SINE B2 -2 193 2 1 642 249 33 0 0 chrX 7552612 7552642 -159097654 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 642 1110 67 0 0 chrX 7552642 7552776 -159097520 - B1_Mm SINE Alu -13 134 1 1 642 361 243 107 45 chrX 7553160 7553272 -159097024 - B1F SINE Alu -13 136 18 1 642 446 196 10 0 chrX 7553447 7553549 -159096747 + CT-rich Low_complexity Low_complexity 2 104 0 1 642 372 282 0 83 chrX 7553554 7553674 -159096622 - B1F2 SINE Alu -6 143 34 1 642 231 287 15 129 chrX 7553577 7553709 -159096587 - ID_B1 SINE B4 -25 199 83 1 642 471 327 23 55 chrX 7553953 7554124 -159096172 - ID_B1 SINE B4 -29 195 27 1 642 769 100 158 0 chrX 7554150 7554270 -159096026 - B1_Mur4 SINE Alu -10 140 2 1 642 985 268 10 0 chrX 7554374 7554583 -159095713 + B3 SINE B2 6 216 0 1 642 695 130 9 36 chrX 7554604 7554716 -159095580 - B1_Mm SINE Alu -10 137 29 1 642 234 282 54 93 chrX 7554642 7554771 -159095525 - RLTR25A LTR ERVK -527 576 453 1 642 332 294 20 93 chrX 7555207 7555345 -159094951 + B1_Mur1 SINE Alu 11 139 -11 1 642 1241 54 0 0 chrX 7555345 7555493 -159094803 + B1_Mus1 SINE Alu 1 148 0 1 642 325 294 20 93 chrX 7555493 7555504 -159094792 + B1_Mur4 SINE Alu 140 150 0 1 642 449 137 0 27 chrX 7555749 7555824 -159094472 + B3A SINE B2 1 73 -125 1 642 447 292 71 147 chrX 7555826 7555949 -159094347 - B3 SINE B2 0 216 113 1 642 1284 41 0 0 chrX 7555949 7556096 -159094200 + B1_Mus2 SINE Alu 1 147 0 1 642 447 292 71 147 chrX 7556096 7556197 -159094099 - B3 SINE B2 -104 112 9 1 642 1271 82 0 23 chrX 7556612 7556771 -159093525 + B2_Mm2 SINE B2 3 161 -34 1 642 189 0 0 0 chrX 7556771 7556792 -159093504 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 1 642 1271 82 0 23 chrX 7556792 7556806 -159093490 + B2_Mm2 SINE B2 162 172 -23 1 642 1346 67 16 27 chrX 7556878 7557061 -159093235 - B2_Mm2 SINE B2 -14 181 1 1 642 1195 55 7 0 chrX 7557262 7557407 -159092889 - B1_Mm SINE Alu 0 147 2 1 642 692 153 12 175 chrX 7557857 7558023 -159092273 - B1_Mur1 SINE Alu -10 139 1 1 642 1238 42 0 0 chrX 7558049 7558191 -159092105 - B1_Mus2 SINE Alu -5 142 1 1 642 1292 113 5 0 chrX 7558324 7558509 -159091787 + B2_Mm1t SINE B2 1 186 -7 1 642 995 98 249 6 chrX 7559489 7559654 -159090642 + B3 SINE B2 1 205 -11 1 642 1169 36 43 0 chrX 7559683 7559823 -159090473 + B1_Mus1 SINE Alu 3 148 0 1 642 569 248 144 23 chrX 7559920 7560052 -159090244 - B1_Mur1 SINE Alu 0 149 2 1 642 1026 47 0 0 chrX 7561099 7561226 -159089070 - B1_Mus1 SINE Alu 0 148 22 1 642 1007 55 247 7 chrX 7561245 7561391 -159088905 - B2_Mm2 SINE B2 -14 181 1 1 642 1441 63 32 5 chrX 7561563 7561753 -159088543 + B2_Mm2 SINE B2 1 195 0 1 642 793 109 43 21 chrX 7561785 7561925 -159088371 + B1_Mus1 SINE Alu 6 148 0 1 642 1108 76 14 0 chrX 7562692 7562837 -159087459 - B1_Mus2 SINE Alu 0 147 1 1 642 276 50 0 24 chrX 7563117 7563158 -159087138 - B3A SINE B2 -158 40 1 1 642 1464 69 5 0 chrX 7563215 7563404 -159086892 - B2_Mm1a SINE B2 -2 191 2 1 642 236 347 0 51 chrX 7563810 7563889 -159086407 + PB1D10 SINE Alu 33 107 -10 1 642 270 0 0 0 chrX 7564193 7564223 -159086073 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 642 1219 22 0 0 chrX 7564223 7564361 -159085935 - B1_Mm SINE Alu -9 138 1 1 642 304 257 13 13 chrX 7564448 7564464 -159085832 - BC1_Mm scRNA scRNA -76 76 2 1 642 353 203 0 0 chrX 7564464 7564523 -159085773 - ID SINE ID -164 60 2 1 642 315 358 0 84 chrX 7564560 7564691 -159085605 - PB1D7 SINE Alu 0 120 1 1 642 374 269 0 0 chrX 7564755 7564833 -159085463 + ID_B1 SINE B4 122 199 -25 1 642 408 250 12 0 chrX 7564805 7564889 -159085407 + B1_Mur1 SINE Alu 65 149 0 1 642 495 0 0 0 chrX 7564968 7565023 -159085273 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 642 22 0 0 0 chrX 7565425 7565447 -159084849 + AT_rich Low_complexity Low_complexity 1 22 0 1 642 814 211 0 0 chrX 7565449 7565591 -159084705 - B1_Mur3 SINE Alu -7 142 1 1 642 348 273 48 32 chrX 7565640 7565765 -159084531 - B3A SINE B2 -16 200 74 1 642 520 301 57 17 chrX 7565861 7566037 -159084259 + B4A SINE B4 107 289 -3 1 642 446 259 19 0 chrX 7566086 7566194 -159084102 + B1F SINE Alu 1 117 -3 1 642 542 190 39 90 chrX 7566196 7566352 -159083944 + B1_Mur4 SINE Alu 2 149 -1 1 642 322 231 53 53 chrX 7566450 7566564 -159083732 - PB1D7 SINE Alu -6 114 1 1 642 21 36 0 0 chrX 7566575 7566603 -159083693 + AT_rich Low_complexity Low_complexity 1 28 0 1 642 806 175 29 0 chrX 7566603 7566740 -159083556 - B1_Mur3 SINE Alu -8 141 1 1 642 1389 74 58 0 chrX 7566823 7567055 -159083241 + L1_Mus1 LINE L1 6366 6567 0 1 642 975 33 0 16 chrX 7567056 7567178 -159083118 + B1_Mus1 SINE Alu 28 147 -1 1 642 240 290 148 10 chrX 7567240 7567309 -159082987 + FAM SINE Alu 138 217 -94 1 642 477 312 131 23 chrX 7567309 7567568 -159082728 + B4A SINE B4 3 289 -3 1 642 240 290 148 10 chrX 7567568 7567599 -159082697 + FAM SINE Alu 218 251 -60 1 642 261 207 0 0 chrX 7567832 7567914 -159082382 + T-rich Low_complexity Low_complexity 1 82 0 1 642 1268 27 0 0 chrX 7568070 7568216 -159082080 + B1_Mus2 SINE Alu 2 147 0 1 642 572 186 110 0 chrX 7568285 7568403 -159081893 - B1_Mur3 SINE Alu -18 131 1 1 642 432 236 39 140 chrX 7570111 7570144 -159080152 - B2_Mm2 SINE B2 -3 192 169 1 642 279 0 0 0 chrX 7570144 7570175 -159080121 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 642 676 174 0 138 chrX 7570175 7570342 -159079954 - B1_Mus2 SINE Alu -3 144 1 1 642 632 209 50 22 chrX 7570342 7570514 -159079782 - B3 SINE B2 -27 168 7 1 642 507 236 0 41 chrX 7570608 7570754 -159079542 + B1_Mur3 SINE Alu 4 143 -6 1 642 615 180 78 57 chrX 7570791 7570932 -159079364 + B3A SINE B2 4 147 -51 1 642 342 0 0 0 chrX 7570932 7570970 -159079326 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 642 998 95 7 39 chrX 7570993 7571146 -159079150 + B1_Mus1 SINE Alu 1 148 0 1 642 1509 168 111 51 chrX 7571161 7571512 -159078784 + ORR1C2 LTR MaLR 13 384 0 1 642 2368 82 6 0 chrX 7571512 7571786 -159078510 - ORR1A2 LTR MaLR -49 278 3 1 642 319 116 0 0 chrX 7571786 7571829 -159078467 + ORR1C2 LTR MaLR 341 383 -1 1 642 267 54 0 0 chrX 7571831 7571868 -159078428 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 1 642 398 328 84 32 chrX 7571995 7572166 -159078130 - B4A SINE B4 -33 191 1 1 642 890 158 211 17 chrX 7572230 7572410 -159077886 + B3 SINE B2 1 215 -1 1 642 3744 207 46 115 chrX 7572426 7572899 -159077397 - L1_Rod LINE L1 -407 5440 4970 2 642 906 122 0 8 chrX 7572899 7573031 -159077265 - B1_Mm SINE Alu -16 131 1 2 642 3744 207 46 115 chrX 7573031 7573088 -159077208 - L1_Rod LINE L1 -878 4969 4919 2 642 230 0 33 0 chrX 7573088 7573118 -159077178 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 642 1046 43 14 48 chrX 7573123 7573270 -159077026 - B1_Mm SINE Alu -5 142 1 2 642 3744 207 46 115 chrX 7573270 7574149 -159076147 - L1_Rod LINE L1 -929 4918 4122 2 642 292 291 19 32 chrX 7574125 7574170 -159076126 - L1_Rod LINE L1 -3855 2291 2249 2 642 1230 54 0 0 chrX 7574170 7574317 -159075979 - B1_Mus2 SINE Alu 0 147 1 2 642 1393 72 11 6 chrX 7574317 7574497 -159075799 - B2_Mm2 SINE B2 -13 182 1 2 642 4274 188 81 14 chrX 7574497 7575589 -159074707 - L1_Rod LINE L1 -3898 2248 1098 2 642 931 69 247 7 chrX 7575589 7575735 -159074561 + B2_Mm2 SINE B2 1 181 -14 2 642 2367 208 52 76 chrX 7575735 7576093 -159074203 - L1_Rod LINE L1 -6511 1097 738 2 642 309 326 23 0 chrX 7576156 7576285 -159074011 - L1_Rod LINE L1 -6859 749 618 2 642 379 158 118 35 chrX 7576351 7576436 -159073860 - MTC LTR MaLR -327 94 3 2 642 466 287 139 0 chrX 7576436 7576549 -159073747 - B3A SINE B2 -54 144 16 2 642 26 0 0 0 chrX 7576571 7576597 -159073699 + AT_rich Low_complexity Low_complexity 1 26 0 2 642 1193 35 35 0 chrX 7576597 7576740 -159073556 - B1_Mus1 SINE Alu 0 148 1 2 642 966 191 71 9 chrX 7576744 7576955 -159073341 - B4A SINE B4 -68 224 1 2 642 1179 54 0 51 chrX 7577007 7577163 -159073133 + B1_Mus1 SINE Alu 1 148 0 2 642 204 125 0 0 chrX 7577163 7577195 -159073101 + (A)n Simple_repeat Simple_repeat 1 32 0 2 642 244 252 98 98 chrX 7577237 7577360 -159072936 + RMER15 LTR ERVL 407 529 -46 2 642 210 262 0 0 chrX 7577481 7577523 -159072773 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 642 21 71 0 0 chrX 7577537 7577579 -159072717 + AT_rich Low_complexity Low_complexity 1 42 0 2 642 272 216 149 0 chrX 7577700 7577774 -159072522 - RSINE1 SINE B4 -23 142 58 2 642 398 208 211 24 chrX 7577806 7577929 -159072367 - B1F SINE Alu -1 148 3 2 642 455 0 18 0 chrX 7577961 7578016 -159072280 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 642 721 207 46 7 chrX 7578019 7578170 -159072126 - B3A SINE B2 -38 160 4 2 642 227 116 14 42 chrX 7578547 7578561 -159071735 + A-rich Low_complexity Low_complexity 3 16 0 2 642 1225 41 7 0 chrX 7578561 7578707 -159071589 + B1_Mus1 SINE Alu 2 148 0 2 642 227 116 14 42 chrX 7578707 7578764 -159071532 + A-rich Low_complexity Low_complexity 17 71 0 2 642 548 316 58 36 chrX 7578906 7579129 -159071167 - RMER15-int LTR ERVL -2306 2693 2466 2 642 1188 195 144 25 chrX 7579223 7579549 -159070747 + MTC LTR MaLR 3 367 -54 2 642 547 321 111 34 chrX 7579590 7579977 -159070319 - RMER15-int LTR ERVL -4311 688 272 2 642 265 283 48 57 chrX 7580030 7580135 -159070161 - RMER15 LTR ERVL -18 557 454 2 642 1098 119 27 5 chrX 7580290 7580475 -159069821 + B2_Mm2 SINE B2 1 189 -6 2 642 1213 48 7 0 chrX 7580506 7580653 -159069643 + B1_Mus1 SINE Alu 1 148 0 2 642 868 161 232 0 chrX 7580679 7580847 -159069449 + B3 SINE B2 1 207 -9 2 642 22 35 0 0 chrX 7580847 7580876 -159069420 + AT_rich Low_complexity Low_complexity 1 29 0 2 642 368 115 115 0 chrX 7580883 7580944 -159069352 + B1_Mm SINE Alu 71 138 -9 2 642 1184 61 7 0 chrX 7581710 7581857 -159068439 + B1_Mus1 SINE Alu 1 148 0 2 642 229 26 53 0 chrX 7581857 7581895 -159068401 + (CAAAAA)n Simple_repeat Simple_repeat 4 43 0 2 642 239 222 111 0 chrX 7581922 7581985 -159068311 - ID4_ SINE ID -9 74 5 2 642 224 125 0 0 chrX 7582048 7582080 -159068216 + MIRc SINE MIR 118 149 -119 2 642 252 114 0 0 chrX 7582117 7582152 -159068144 + B3A SINE B2 1 35 -163 2 642 1287 66 6 0 chrX 7582279 7582445 -159067851 + B2_Mm1a SINE B2 1 167 -26 2 642 1214 62 0 0 chrX 7582496 7582641 -159067655 + B1_Mus2 SINE Alu 1 145 -2 2 642 319 266 0 41 chrX 7583125 7583223 -159067073 - B3 SINE B2 -43 173 80 2 642 522 189 0 0 chrX 7583269 7583359 -159066937 + B1_Mur1 SINE Alu 55 144 -5 2 642 499 299 14 55 chrX 7583377 7583522 -159066774 - RSINE1 SINE B4 0 165 27 2 642 189 0 0 0 chrX 7583523 7583544 -159066752 + (CCA)n Simple_repeat Simple_repeat 1 21 0 2 642 236 385 11 0 chrX 7583588 7583679 -159066617 - PB1D10 SINE Alu -22 95 4 2 642 208 250 18 0 chrX 7583847 7583903 -159066393 + (TCTG)n Simple_repeat Simple_repeat 2 58 0 2 642 1240 34 0 20 chrX 7584068 7584219 -159066077 - B1_Mus1 SINE Alu 0 148 1 2 642 325 263 80 10 chrX 7584240 7584340 -159065956 - B3 SINE B2 -1 215 109 2 642 769 164 40 67 chrX 7584353 7584447 -159065849 + B1_Mur4 SINE Alu 5 96 -54 2 642 1401 71 11 0 chrX 7584447 7584630 -159065666 + B2_Mm1t SINE B2 2 186 -7 2 642 769 164 40 67 chrX 7584630 7584685 -159065611 + B1_Mur4 SINE Alu 97 150 0 2 642 1581 42 5 0 chrX 7584693 7584884 -159065412 + B2_Mm1t SINE B2 2 193 0 2 642 945 110 14 20 chrX 7584917 7585065 -159065231 + B1_Mus2 SINE Alu 1 147 0 2 642 231 342 13 0 chrX 7585093 7585172 -159065124 - B3A SINE B2 -118 80 1 2 642 367 300 26 43 chrX 7585205 7585320 -159064976 - PB1D7 SINE Alu -1 119 7 2 642 211 219 46 15 chrX 7585439 7585504 -159064792 + CT-rich Low_complexity Low_complexity 3 69 0 2 642 273 258 65 0 chrX 7585506 7585568 -159064728 - PB1 SINE Alu -17 110 45 2 642 397 266 34 50 chrX 7585672 7585791 -159064505 + PB1D10 SINE Alu 1 117 0 2 642 999 220 34 0 chrX 7586115 7586324 -159063972 - B3 SINE B2 0 216 1 2 642 881 79 47 73 chrX 7586443 7586593 -159063703 - B1_Mus2 SINE Alu -1 146 1 2 642 963 114 102 11 chrX 7586634 7586811 -159063485 - B2_Mm2 SINE B2 -2 193 1 2 642 238 316 0 12 chrX 7587104 7587184 -159063112 + ID4 SINE ID 5 83 0 2 642 1154 14 0 80 chrX 7587193 7587343 -159062953 + B1_Mm SINE Alu 1 138 -9 2 642 414 0 0 0 chrX 7587423 7587469 -159062827 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 642 970 183 28 56 chrX 7587473 7587687 -159062609 + B3 SINE B2 1 208 -8 2 642 281 125 0 18 chrX 7587705 7587762 -159062534 + (CATATA)n Simple_repeat Simple_repeat 5 60 0 2 642 968 107 0 0 chrX 7587765 7587896 -159062400 + B1_Mur4 SINE Alu 11 141 -9 2 642 413 218 269 8 chrX 7588081 7588215 -159062081 - B4A SINE B4 -67 225 57 2 642 333 0 0 0 chrX 7588224 7588261 -159062035 + (TTTC)n Simple_repeat Simple_repeat 4 40 0 2 642 1216 29 0 0 chrX 7588274 7588413 -159061883 - B1_Mus2 SINE Alu -8 139 1 2 642 328 315 178 25 chrX 7588552 7588960 -159061336 - L1MC2 LINE L1 -9 6335 5853 2 642 1325 122 16 0 chrX 7588960 7589149 -159061147 - B2_Mm2 SINE B2 -3 192 1 2 642 323 231 182 18 chrX 7589149 7589171 -159061125 - L1MC2 LINE L1 -1933 5852 5830 2 642 397 125 43 26 chrX 7589181 7589296 -159061000 + (TCTCTG)n Simple_repeat Simple_repeat 3 119 0 2 642 424 309 118 0 chrX 7589827 7589963 -159060333 - RSINE1 SINE B4 -10 155 4 2 642 233 347 0 26 chrX 7589990 7590067 -159060229 - ID2 SINE ID -8 75 1 2 642 755 333 108 48 chrX 7590269 7590710 -159059586 - Lx8 LINE L1 -52 7421 6956 2 642 516 16 0 0 chrX 7590710 7590771 -159059525 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 642 755 333 108 48 chrX 7590771 7590894 -159059402 - Lx8 LINE L1 -518 6955 6823 2 642 367 366 103 76 chrX 7590961 7591357 -159058939 - HAL1 LINE L1 -939 1568 1162 2 642 252 0 0 0 chrX 7591374 7591402 -159058894 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 2 642 676 186 13 58 chrX 7591502 7591656 -159058640 + B1_Mur4 SINE Alu 2 148 -2 2 642 24 53 0 0 chrX 7591670 7591708 -159058588 + AT_rich Low_complexity Low_complexity 1 38 0 2 642 451 204 36 27 chrX 7591721 7591832 -159058464 + PB1D9 SINE Alu 3 114 -6 2 642 224 311 0 0 chrX 7591879 7591940 -159058356 - PB1D10 SINE Alu -21 96 36 2 642 714 274 37 5 chrX 7592057 7592244 -159058052 + B4A SINE B4 1 193 -99 2 642 219 69 0 0 chrX 7592493 7592522 -159057774 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2 642 1445 59 16 26 chrX 7592681 7592873 -159057423 + B2_Mm2 SINE B2 1 190 -5 2 642 707 237 94 35 chrX 7592894 7593095 -159057201 + B3 SINE B2 1 213 -3 2 642 595 185 269 19 chrX 7593434 7593594 -159056702 + B3 SINE B2 2 201 -15 2 642 856 85 132 0 chrX 7593612 7593741 -159056555 + B1_Mus2 SINE Alu 1 146 -1 2 642 365 304 26 9 chrX 7593745 7593858 -159056438 + PB1D10 SINE Alu 2 116 -1 2 642 570 222 199 7 chrX 7593887 7594023 -159056273 + B3 SINE B2 51 212 -4 2 642 876 149 28 0 chrX 7594043 7594184 -159056112 - B1_Mur4 SINE Alu -4 146 2 2 642 567 303 7 24 chrX 7594379 7594538 -159055758 + B3A SINE B2 37 186 -9 2 642 390 323 74 12 chrX 7594538 7594750 -159055546 - L1M5 LINE L1 -2818 3328 3099 2 642 29 0 0 0 chrX 7594799 7594828 -159055468 + AT_rich Low_complexity Low_complexity 1 29 0 2 642 1040 65 65 7 chrX 7594836 7594975 -159055321 - B1_Mm SINE Alu 0 147 1 2 642 21 0 0 0 chrX 7594978 7594999 -159055297 + AT_rich Low_complexity Low_complexity 1 21 0 2 642 218 333 111 0 chrX 7595710 7595782 -159054514 + ID4 SINE ID 1 80 -3 2 642 839 260 0 46 chrX 7596082 7596300 -159053996 - B3 SINE B2 -7 209 2 2 642 274 236 0 68 chrX 7596542 7596592 -159053704 + PB1 SINE Alu 21 66 -61 2 642 804 284 40 0 chrX 7596592 7596793 -159053503 + B3 SINE B2 1 209 -7 2 642 21 0 0 0 chrX 7596844 7596865 -159053431 + AT_rich Low_complexity Low_complexity 1 21 0 2 642 704 47 0 0 chrX 7596868 7596954 -159053342 + BC1_Mm scRNA scRNA 1 86 -66 2 642 418 229 212 0 chrX 7597047 7597165 -159053131 + B1F1 SINE Alu 1 143 -6 3 642 992 137 60 54 chrX 7597330 7597515 -159052781 + B2_Mm2 SINE B2 1 186 -9 3 642 255 219 0 59 chrX 7597763 7597831 -159052465 - PB1D9 SINE Alu -1 119 56 3 642 851 229 16 27 chrX 7597906 7598090 -159052206 - B3A SINE B2 -3 195 14 3 642 412 313 99 0 chrX 7598176 7598307 -159051989 - MLT2B1 LTR ERVL 0 554 411 3 642 498 234 261 39 chrX 7598298 7598539 -159051757 - MLT2B1 LTR ERVL -254 300 3 3 642 1722 169 70 17 chrX 7598548 7598903 -159051393 + ORR1C1 LTR MaLR 1 374 -4 3 642 714 273 61 13 chrX 7598908 7599138 -159051158 - ERVL-int LTR ERVL -4 5753 5513 3 642 460 227 0 0 chrX 7599138 7599226 -159051070 + ID_B1 SINE B4 136 223 -1 3 642 1076 69 90 74 chrX 7599229 7599418 -159050878 + B2_Mm2 SINE B2 2 193 -2 3 642 22 75 0 15 chrX 7599432 7599468 -159050828 + AT_rich Low_complexity Low_complexity 1 36 0 3 642 1111 102 0 7 chrX 7599468 7599616 -159050680 - B1_Mus1 SINE Alu -1 147 1 3 642 22 75 0 15 chrX 7599616 7599647 -159050649 + AT_rich Low_complexity Low_complexity 1 31 0 3 642 779 118 14 49 chrX 7599647 7599790 -159050506 - B2_Mm1t SINE B2 -1 192 55 3 642 816 97 0 9 chrX 7599782 7599897 -159050399 - B1_Mm SINE Alu -32 115 2 3 642 306 0 0 0 chrX 7599912 7599946 -159050350 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 642 447 235 128 48 chrX 7600024 7600212 -159050084 - B4 SINE B4 -89 203 1 3 642 351 211 29 50 chrX 7600251 7600391 -159049905 - L1M2 LINE L1 -835 5308 5172 3 642 1363 85 32 5 chrX 7600401 7600591 -159049705 - B2_Mm2 SINE B2 0 195 1 3 642 920 179 0 0 chrX 7600648 7600793 -159049503 + B1_Mus2 SINE Alu 3 147 0 3 642 477 255 41 41 chrX 7600826 7600973 -159049323 - RSINE1 SINE B4 -15 150 4 3 642 252 229 92 119 chrX 7601031 7601140 -159049156 + PB1D7 SINE Alu 1 109 -11 3 642 204 237 0 0 chrX 7601167 7601205 -159049091 + polypurine Low_complexity Low_complexity 2 39 0 3 642 1203 50 0 0 chrX 7601297 7601437 -159048859 + B1_Mm SINE Alu 1 140 -7 3 642 1160 56 28 0 chrX 7601665 7601809 -159048487 + B1_Mus1 SINE Alu 1 148 0 3 642 1399 95 21 0 chrX 7601838 7602027 -159048269 + B2_Mm2 SINE B2 1 193 -2 3 80 740 174 48 66 chrX 7602027 7602193 -159048103 + B2_Mm2 SINE B2 31 193 -2 3 643 986 211 19 19 chrX 7602209 7602421 -159047875 + B3 SINE B2 1 212 -4 3 643 1484 58 11 0 chrX 7602434 7602623 -159047673 + B2_Mm1t SINE B2 2 192 -1 3 643 1186 68 0 0 chrX 7602625 7602772 -159047524 + B1_Mus2 SINE Alu 1 147 0 3 643 333 238 12 24 chrX 7602832 7602914 -159047382 + ID4 SINE ID 2 82 -1 3 643 1462 279 91 4 chrX 7602975 7603474 -159046822 - Lx6 LINE L1 -43 7417 6506 3 643 393 221 0 0 chrX 7603508 7603585 -159046711 - Lx6 LINE L1 -688 6362 6286 3 643 961 136 0 64 chrX 7603774 7603922 -159046374 + B1_Mur4 SINE Alu 3 142 -8 3 643 286 23 0 44 chrX 7603922 7603967 -159046329 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 3 643 401 296 0 30 chrX 7604077 7604178 -159046118 - PB1 SINE Alu -29 98 1 3 643 384 299 0 45 chrX 7604874 7604994 -159045302 - PB1 SINE Alu -15 105 1 3 643 265 348 62 62 chrX 7605064 7605257 -159045039 - MLT1D LTR MaLR -52 453 261 3 643 370 211 0 111 chrX 7605286 7605403 -159044893 + MT2B LTR ERVL 154 257 -344 3 643 964 108 0 0 chrX 7605299 7605428 -159044868 + B1_Mur4 SINE Alu 2 130 -20 3 643 198 71 0 0 chrX 7605430 7605458 -159044838 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 3 643 738 255 38 61 chrX 7605513 7605726 -159044570 + B3 SINE B2 1 208 -8 3 643 237 271 14 0 chrX 7605770 7605840 -159044456 + ID4_ SINE ID 1 71 -12 3 643 1192 61 7 0 chrX 7605895 7606042 -159044254 - B1_Mus1 SINE Alu 0 148 1 3 643 615 192 158 0 chrX 7606063 7606183 -159044113 - B1_Mur4 SINE Alu -10 140 2 3 643 565 185 68 82 chrX 7606229 7606376 -159043920 - B1_Mur3 SINE Alu -2 147 3 3 643 402 344 38 25 chrX 7606468 7606626 -159043670 - RSINE1 SINE B4 -2 163 4 3 643 287 130 0 0 chrX 7607177 7607223 -159043073 - B3 SINE B2 -10 206 161 3 643 838 125 0 14 chrX 7607252 7607398 -159042898 + (TTTCC)n Simple_repeat Simple_repeat 4 147 0 3 643 1154 88 0 0 chrX 7607401 7607548 -159042748 - B1_Mm SINE Alu 0 147 1 3 643 576 259 14 28 chrX 7607570 7607713 -159042583 - ID_B1 SINE B4 0 224 84 3 643 256 211 0 71 chrX 7607762 7607818 -159042478 - B1_Mur1 SINE Alu 0 149 98 3 643 496 252 18 0 chrX 7607838 7607949 -159042347 - PB1D10 SINE Alu 0 117 5 3 643 559 222 0 0 chrX 7608003 7608102 -159042194 - ID_B1 SINE B4 -124 100 2 3 643 288 269 26 0 chrX 7608110 7608188 -159042108 - PB1D10 SINE Alu -37 80 1 3 643 323 292 56 9 chrX 7608499 7608606 -159041690 + PB1D10 SINE Alu 4 115 -2 3 643 755 31 21 0 chrX 7609156 7609253 -159041043 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 3 643 306 50 0 0 chrX 7609395 7609435 -159040861 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 643 1136 62 14 0 chrX 7609447 7609592 -159040704 - B1_Mus1 SINE Alu 0 148 2 3 643 1127 76 0 14 chrX 7609787 7609934 -159040362 + B1_Mus1 SINE Alu 2 146 -2 3 643 954 201 102 15 chrX 7609961 7610158 -159040138 - B3 SINE B2 -1 215 2 3 643 1664 31 0 0 chrX 7610647 7610838 -159039458 - B2_Mm1a SINE B2 -2 191 1 3 643 905 137 0 64 chrX 7610843 7610999 -159039297 - B1_Mur3 SINE Alu -2 147 2 3 643 970 225 11 26 chrX 7611005 7611216 -159039080 - B3 SINE B2 -5 188 1 3 643 183 42 0 0 chrX 7612715 7612739 -159037557 + (TTG)n Simple_repeat Simple_repeat 2 25 0 3 643 1039 72 50 0 chrX 7612739 7612878 -159037418 - B1_Mus1 SINE Alu -2 146 1 3 643 474 177 128 55 chrX 7613039 7613160 -159037136 + B3 SINE B2 28 146 -49 3 643 483 175 39 10 chrX 7613161 7613265 -159037031 + RMER1C Other Other 1236 1342 0 3 643 1367 290 128 98 chrX 7613267 7614097 -159036199 - Lx5 LINE L1 -247 6803 5949 3 643 3294 26 0 8 chrX 7614097 7614490 -159035806 - MTA_Mm LTR MaLR 0 396 7 3 643 305 234 0 0 chrX 7614490 7614554 -159035742 - Lx5 LINE L1 -1100 5950 5887 3 643 675 132 28 0 chrX 7614551 7614657 -159035639 + L1_Mur3 LINE L1 5761 5869 -11 3 643 1347 69 23 0 chrX 7614680 7614853 -159035443 - B2_Mm2 SINE B2 -18 177 1 3 643 1520 268 57 39 chrX 7614862 7615364 -159034932 + RMER19A LTR ERVK 50 532 -205 3 643 2480 82 0 10 chrX 7615364 7615709 -159034587 - RLTR13D6 LTR ERVK -170 636 322 3 643 243 156 138 15 chrX 7615982 7616047 -159034249 + MLT-int LTR MaLR 897 969 -766 3 643 3234 108 59 19 chrX 7616144 7616757 -159033539 - RLTR13D6 LTR ERVK -377 525 1 3 643 811 243 104 14 chrX 7616758 7616979 -159033317 - B4 SINE B4 -50 242 2 3 643 760 219 0 0 chrX 7616983 7617129 -159033167 - B1_Mur1 SINE Alu -1 148 3 3 643 613 246 95 19 chrX 7617258 7617469 -159032827 - RMER15 LTR ERVL -13 562 336 3 643 842 128 67 8 chrX 7617506 7617640 -159032656 - B1_Mus2 SINE Alu 0 147 6 3 643 1129 186 29 0 chrX 7617668 7617878 -159032418 - B3 SINE B2 0 216 1 3 643 970 219 14 45 chrX 7618012 7618232 -159032064 + B3 SINE B2 2 214 -2 3 643 715 236 18 29 chrX 7618238 7618408 -159031888 - RMER5 LTR ERV1 -315 219 52 3 643 1981 95 81 0 chrX 7618407 7618690 -159031606 + ORR1A2 LTR MaLR 14 319 -8 3 643 948 232 5 11 chrX 7618694 7618881 -159031415 + B3 SINE B2 17 202 -14 3 643 217 29 0 105 chrX 7618899 7618937 -159031359 - B3A SINE B2 -164 34 1 3 643 216 67 0 0 chrX 7618981 7619011 -159031285 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 3 643 1065 150 6 0 chrX 7619012 7619172 -159031124 - B2_Mm2 SINE B2 -34 161 1 3 643 613 153 45 0 chrX 7619290 7619401 -159030895 - B1_Mur3 SINE Alu 0 149 34 3 643 405 0 0 0 chrX 7620154 7620199 -159030097 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 3 643 991 149 7 0 chrX 7620532 7620680 -159029616 + B1_Mur4 SINE Alu 1 149 -1 3 643 4339 68 2 0 chrX 7620682 7621227 -159029069 + L1_Mm LINE L1 5212 5757 -126 3 643 5676 48 22 1 chrX 7621227 7621921 -159028375 + L1_Mus1 LINE L1 5859 6566 -1 3 643 970 162 34 34 chrX 7621921 7621955 -159028341 + Lx4B LINE L1 5758 5792 -1266 3 643 1428 102 0 5 chrX 7621987 7622183 -159028113 + B2_Mm2 SINE B2 1 195 0 3 643 1170 111 41 0 chrX 7622209 7622380 -159027916 + B2_Mm1t SINE B2 2 179 -14 3 643 372 96 316 9 chrX 7622427 7622541 -159027755 + B2_Mm2 SINE B2 47 195 0 3 643 1230 48 0 7 chrX 7622613 7622761 -159027535 - B1_Mus1 SINE Alu 0 148 2 3 643 1125 38 0 0 chrX 7622812 7622945 -159027351 + B2_Mm2 SINE B2 1 133 -62 3 643 1226 61 0 0 chrX 7622974 7623121 -159027175 - B1_Mus1 SINE Alu -1 147 1 3 643 1244 89 0 6 chrX 7623208 7623389 -159026907 + (TC)n Simple_repeat Simple_repeat 1 180 0 3 643 1916 108 21 7 chrX 7624024 7624314 -159025982 + MurERV4_19-int LTR ERVK 4881 5174 -606 3 643 1150 176 45 82 chrX 7624616 7624907 -159025389 + MurERV4_19-int LTR ERVK 5161 5440 -340 3 643 512 189 91 6 chrX 7624920 7625003 -159025293 - RMER17C LTR ERVK -135 275 181 3 643 726 12 0 0 chrX 7625003 7625086 -159025210 + (GGGAA)n Simple_repeat Simple_repeat 5 87 0 3 643 512 189 91 6 chrX 7625086 7625167 -159025129 - RMER17C LTR ERVK -230 180 98 3 643 1117 124 83 40 chrX 7625169 7625447 -159024849 + MurERV4_19-int LTR ERVK 5471 5760 -20 3 643 1398 95 5 0 chrX 7625497 7625686 -159024610 + B2_Mm1t SINE B2 2 191 -2 3 643 1183 82 0 0 chrX 7625692 7625838 -159024458 - B1_Mus1 SINE Alu 0 148 3 4 643 4669 140 44 101 chrX 7625871 7626811 -159023485 + RMER19B LTR ERVK 1 886 -16 4 643 869 154 105 12 chrX 7626811 7626982 -159023314 + B2_Mm2 SINE B2 2 188 -7 4 643 318 214 0 0 chrX 7627002 7627058 -159023238 + MTC LTR MaLR 65 120 -301 4 643 210 143 0 0 chrX 7627058 7627093 -159023203 + (T)n Simple_repeat Simple_repeat 1 35 0 4 643 1152 49 0 0 chrX 7627093 7627236 -159023060 - B1_Mus1 SINE Alu 0 148 6 4 643 1687 131 77 61 chrX 7627247 7627557 -159022739 + MTC LTR MaLR 107 421 0 4 643 572 150 0 10 chrX 7627765 7627867 -159022429 + ORR1B1 LTR MaLR 1 88 -239 4 643 786 274 58 92 chrX 7627921 7628388 -159021908 - RLTR12B LTR ERVK -31 497 47 4 643 590 277 61 95 chrX 7628414 7628523 -159021773 + ORR1B1 LTR MaLR 98 203 -191 4 643 1257 34 0 7 chrX 7628523 7628670 -159021626 - B1_Mus2 SINE Alu 0 147 2 4 643 590 277 61 95 chrX 7628670 7628823 -159021473 + ORR1B1 LTR MaLR 204 351 -43 4 643 1339 79 17 6 chrX 7628842 7629021 -159021275 + B2_Mm2 SINE B2 1 181 -14 4 643 622 78 40 8 chrX 7629032 7629139 -159021157 - B1_Mus2 SINE Alu 0 147 1 4 643 267 200 16 32 chrX 7629184 7629246 -159021050 - MERVL_2A-int LTR ERVL -4184 1577 1517 4 643 625 134 134 52 chrX 7629325 7629459 -159020837 - B1_Mur3 SINE Alu -1 148 4 4 643 1465 227 181 16 chrX 7629459 7629906 -159020390 - MERVL_2A-int LTR ERVL -4409 1352 832 4 643 490 201 119 0 chrX 7629955 7630134 -159020162 - MERVL_2A-int LTR ERVL -5228 533 273 4 643 444 37 0 0 chrX 7630424 7630478 -159019818 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 643 864 260 65 120 chrX 7630484 7630825 -159019471 + MT2A LTR ERVL 134 455 -78 4 643 507 218 9 35 chrX 7630834 7630948 -159019348 - B1_Mur3 SINE Alu -1 148 38 4 643 1166 81 0 13 chrX 7631167 7631317 -159018979 + B1_Mus1 SINE Alu 1 148 0 4 643 301 294 11 21 chrX 7631466 7631560 -159018736 + MLT1A1 LTR MaLR 316 408 0 4 643 926 120 0 80 chrX 7632021 7632184 -159018112 - B1_Mur4 SINE Alu 0 150 1 4 643 717 124 0 0 chrX 7632835 7632932 -159017364 + B1_Mur4 SINE Alu 52 148 -2 4 643 953 174 41 23 chrX 7633541 7633712 -159016584 + B3 SINE B2 2 175 -41 4 643 414 57 0 0 chrX 7633712 7633765 -159016531 + (CATA)n Simple_repeat Simple_repeat 2 54 0 4 643 1840 166 65 20 chrX 7633768 7634119 -159016177 + ORR1B2 LTR MaLR 1 367 0 4 643 312 83 0 0 chrX 7634131 7634179 -159016117 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 643 605 223 83 17 chrX 7634181 7634352 -159015944 - B3A SINE B2 -26 169 1 4 643 866 157 22 0 chrX 7634397 7634531 -159015765 + B1_Mus1 SINE Alu 5 141 -7 4 643 236 325 0 38 chrX 7635000 7635080 -159015216 - MLT1D LTR MaLR -426 79 3 4 643 621 256 56 11 chrX 7635333 7635511 -159014785 + MLT1D LTR MaLR 49 234 -271 4 643 648 185 16 16 chrX 7635804 7635925 -159014371 - PB1 SINE Alu -2 125 5 4 643 408 254 62 26 chrX 7636328 7636441 -159013855 - PB1D10 SINE Alu 0 117 1 4 643 1219 68 0 0 chrX 7637075 7637222 -159013074 - B1_Mus1 SINE Alu 0 148 2 4 643 248 265 82 73 chrX 7638243 7638353 -159011943 + MER113 DNA MER1_type 231 341 -180 4 643 270 269 148 44 chrX 7638556 7638785 -159011511 - L2c LINE L2 -2 3385 3133 4 643 294 267 37 65 chrX 7639531 7639639 -159010657 + PB1D7 SINE Alu 14 118 -2 4 643 426 249 79 158 chrX 7642851 7642950 -159007346 + B3A SINE B2 1 107 -91 4 643 758 216 0 7 chrX 7642950 7643090 -159007206 + B1_Mus2 SINE Alu 2 140 -7 4 643 426 249 79 158 chrX 7643090 7643205 -159007091 + B3A SINE B2 108 198 0 4 643 1112 111 50 50 chrX 7643650 7643831 -159006465 + B2_Mm2 SINE B2 1 181 -14 4 643 619 185 170 7 chrX 7643855 7644002 -159006294 + B3 SINE B2 1 171 -45 4 643 417 98 33 0 chrX 7643999 7644060 -159006236 + B1_Mus2 SINE Alu 76 138 -9 4 643 1191 68 0 0 chrX 7644165 7644312 -159005984 + B1_Mus2 SINE Alu 1 147 0 4 643 276 246 16 0 chrX 7644832 7644893 -159005403 + ID4_ SINE ID 9 70 -13 4 643 375 252 221 36 chrX 7645005 7645038 -159005258 + B4 SINE B4 58 223 -1 4 643 590 168 37 0 chrX 7645038 7645145 -159005151 + PB1D9 SINE Alu 10 120 0 4 643 1087 71 7 0 chrX 7645399 7645540 -159004756 + B1_Mus1 SINE Alu 2 143 -5 4 643 417 278 21 0 chrX 7646739 7646836 -159003460 + PB1D10 SINE Alu 14 112 -5 4 643 260 300 0 0 chrX 7646844 7646904 -159003392 + MLT1J2 LTR MaLR 376 435 -13 4 643 889 169 126 76 chrX 7646943 7647093 -159003203 - URR1B DNA MER1_type -13 212 51 4 643 1533 27 15 65 chrX 7647093 7647294 -159003002 + B2_Mm1a SINE B2 1 191 -2 4 643 889 169 126 76 chrX 7647294 7647341 -159002955 - URR1B DNA MER1_type -175 50 5 4 643 219 313 44 44 chrX 7648469 7648606 -159001690 + L2 LINE L2 2461 2597 -822 4 643 215 313 70 35 chrX 7648735 7648821 -159001475 - MIR SINE MIR 0 262 174 4 643 976 118 0 0 chrX 7648854 7648990 -159001306 - B1_Mus2 SINE Alu -10 137 2 4 643 279 54 0 0 chrX 7649386 7649423 -159000873 + (TC)n Simple_repeat Simple_repeat 2 38 0 4 643 238 323 130 47 chrX 7650071 7650240 -159000056 - MER46C DNA MER2_type -11 327 145 4 643 377 192 212 0 chrX 7650366 7650465 -158999831 + PB1D9 SINE Alu 1 120 0 4 643 31 96 0 0 chrX 7651435 7651529 -158998767 + GC_rich Low_complexity Low_complexity 1 94 0 4 643 304 286 43 0 chrX 7652452 7652522 -158997774 + RSINE1 SINE B4 88 160 -5 4 643 26 0 0 0 chrX 7652525 7652551 -158997745 + AT_rich Low_complexity Low_complexity 1 26 0 4 643 286 368 0 0 chrX 7652649 7652725 -158997571 + B4A SINE B4 217 292 0 4 643 1623 104 0 35 chrX 7653028 7653288 -158997008 - Lx2 LINE L1 0 6997 6747 4 643 870 241 38 86 chrX 7654586 7654700 -158995596 + MT2A LTR ERVL 13 127 -406 4 643 1189 74 0 0 chrX 7654700 7654848 -158995448 - B1_Mus1 SINE Alu 0 148 1 4 643 870 241 38 86 chrX 7654848 7655023 -158995273 + MT2A LTR ERVL 128 288 -245 4 643 315 172 18 92 chrX 7655022 7655131 -158995165 + MT2A LTR ERVL 408 508 -25 4 643 223 127 32 0 chrX 7655200 7655263 -158995033 + (TTTG)n Simple_repeat Simple_repeat 4 68 0 4 643 916 134 42 14 chrX 7655273 7655417 -158994879 - B1_Mur4 SINE Alu -1 149 2 4 643 3733 180 77 18 chrX 7655417 7656441 -158993855 + MERVL_2A-int LTR ERVL 41 1175 -4586 4 643 826 169 0 8 chrX 7656457 7656588 -158993708 + B1_Mur4 SINE Alu 4 133 -17 4 643 456 19 0 0 chrX 7656591 7656644 -158993652 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 4 643 593 174 64 9 chrX 7656660 7656770 -158993526 + B1_Mur3 SINE Alu 34 149 0 4 643 1143 133 58 0 chrX 7656774 7656947 -158993349 + B2_Mm1t SINE B2 1 183 -10 4 643 345 84 21 23 chrX 7656991 7657085 -158993211 + B2_Mm2 SINE B2 48 177 -18 4 643 1241 104 0 6 chrX 7657095 7657269 -158993027 + B2_Mm2 SINE B2 23 195 0 4 643 2427 118 40 20 chrX 7657347 7657746 -158992550 - MTB_Mm LTR MaLR 0 407 1 4 643 369 0 0 0 chrX 7657772 7657813 -158992483 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 643 252 0 0 85 chrX 7657888 7657935 -158992361 + (TTTTTG)n Simple_repeat Simple_repeat 6 48 0 4 643 1168 41 7 14 chrX 7657935 7658083 -158992213 - B1_Mus2 SINE Alu 0 147 1 4 643 414 303 10 0 chrX 7658145 7658244 -158992052 + PB1 SINE Alu 1 100 -27 4 643 1443 50 0 32 chrX 7658305 7658492 -158991804 - B2_Mm2 SINE B2 -14 181 1 4 643 1176 68 0 0 chrX 7658587 7658734 -158991562 - B1_Mus2 SINE Alu 0 147 1 4 643 701 146 120 23 chrX 7659339 7659472 -158990824 + B1_Mur2 SINE Alu 2 147 -2 4 643 1149 115 60 0 chrX 7659476 7659658 -158990638 + B2_Mm1t SINE B2 1 193 0 4 643 644 239 22 15 chrX 7659683 7659819 -158990477 + B1F SINE Alu 13 149 0 4 643 1502 68 0 5 chrX 7659837 7660030 -158990266 + B2_Mm2 SINE B2 1 192 -3 4 643 1171 64 0 0 chrX 7660182 7660323 -158989973 + B1_Mus2 SINE Alu 1 141 -6 4 643 837 30 0 0 chrX 7660325 7660425 -158989871 + (GA)n Simple_repeat Simple_repeat 1 100 0 4 643 482 207 0 123 chrX 7660454 7660592 -158989704 + MT2B LTR ERVL 137 257 -344 4 643 857 37 0 0 chrX 7660491 7660598 -158989698 + B1_Mus1 SINE Alu 3 109 -39 4 643 466 252 9 0 chrX 7660595 7660702 -158989594 + ID_B1 SINE B4 51 158 -66 4 643 274 291 56 37 chrX 7660625 7660732 -158989564 + PB1D7 SINE Alu 1 109 -11 4 643 354 253 40 40 chrX 7661120 7661219 -158989077 + U6 snRNA snRNA 9 107 0 4 643 585 250 16 31 chrX 7661345 7661473 -158988823 - RSINE1 SINE B4 -12 153 28 4 643 864 201 0 7 chrX 7661491 7661636 -158988660 - B1_Mur2 SINE Alu 0 149 6 4 643 934 228 5 10 chrX 7661664 7661859 -158988437 - B3 SINE B2 0 216 23 4 643 2577 129 208 15 chrX 7661903 7662384 -158987912 + RMER15 LTR ERVL 1 574 -1 4 643 318 67 0 0 chrX 7663094 7663139 -158987157 + (TGG)n Simple_repeat Simple_repeat 2 46 0 4 643 495 0 0 0 chrX 7663337 7663392 -158986904 + (TCC)n Simple_repeat Simple_repeat 2 56 0 4 643 1229 41 7 0 chrX 7663475 7663621 -158986675 - B1_Mm SINE Alu 0 147 1 4 643 266 73 24 0 chrX 7664360 7664401 -158985895 + (TCC)n Simple_repeat Simple_repeat 1 42 0 4 643 876 53 26 0 chrX 7664425 7664539 -158985757 - B2_Mm2 SINE B2 -1 194 78 4 643 256 319 0 0 chrX 7664533 7664605 -158985691 - ID_B1 SINE B4 -69 155 84 4 643 234 368 7 19 chrX 7664660 7664815 -158985481 + (TCCA)n Simple_repeat Simple_repeat 3 155 0 4 643 521 233 86 7 chrX 7665406 7665557 -158984739 - RSINE1 SINE B4 0 165 3 4 643 301 296 35 7 chrX 7667259 7667402 -158982894 + GA-rich Low_complexity Low_complexity 2 148 0 5 643 1239 48 0 0 chrX 7668041 7668188 -158982108 + B1_Mm SINE Alu 1 147 0 5 643 225 0 0 0 chrX 7668188 7668213 -158982083 + (A)n Simple_repeat Simple_repeat 1 25 0 5 643 1281 86 6 11 chrX 7668322 7668499 -158981797 - B2_Mm2 SINE B2 -19 176 1 5 643 758 165 305 0 chrX 7668520 7668684 -158981612 - B3 SINE B2 0 216 3 5 643 285 86 0 49 chrX 7668713 7668774 -158981522 + (TTTTG)n Simple_repeat Simple_repeat 3 60 0 5 643 207 0 0 0 chrX 7668775 7668798 -158981498 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 643 955 131 0 14 chrX 7668798 7668937 -158981359 - B1_Mur3 SINE Alu -11 138 2 5 643 302 265 0 0 chrX 7669088 7669156 -158981140 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 5 643 360 243 40 0 chrX 7669519 7669593 -158980703 - ID_B1 SINE B4 -15 209 133 5 643 484 95 0 0 chrX 7669590 7669653 -158980643 - B2_Mm2 SINE B2 -124 71 9 5 643 807 216 0 0 chrX 7669739 7669887 -158980409 + B1_Mur2 SINE Alu 2 149 0 5 643 336 200 0 0 chrX 7669887 7669957 -158980339 + A-rich Low_complexity Low_complexity 1 70 0 5 643 664 293 43 0 chrX 7670085 7670249 -158980047 - ID_B1 SINE B4 -33 191 21 5 643 1139 65 0 14 chrX 7670306 7670447 -158979849 + B1_Mus1 SINE Alu 2 140 -8 5 643 363 274 177 0 chrX 7670509 7670554 -158979742 + B1F2 SINE Alu 2 147 -2 5 643 368 228 13 0 chrX 7670554 7670633 -158979663 + ID_B1 SINE B4 143 222 -2 5 643 484 221 121 116 chrX 7670746 7670961 -158979335 + B3 SINE B2 1 216 0 5 643 402 248 67 0 chrX 7671120 7671225 -158979071 + PB1D9 SINE Alu 3 114 -6 5 643 201 162 0 0 chrX 7671301 7671338 -158978958 + A-rich Low_complexity Low_complexity 1 37 0 5 643 1210 77 89 0 chrX 7671352 7671521 -158978775 - B2_Mm2 SINE B2 -9 186 3 5 643 2237 189 76 46 chrX 7671645 7672118 -158978178 + RMER5 LTR ERV1 3 497 -37 5 643 1305 52 75 0 chrX 7672118 7672292 -158978004 - B2_Mm2 SINE B2 -8 187 1 5 643 2237 189 76 46 chrX 7672292 7672317 -158977979 + RMER5 LTR ERV1 498 516 -18 5 643 327 25 0 0 chrX 7672328 7672368 -158977928 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 643 389 36 146 0 chrX 7672415 7672470 -158977826 + B2_Mm2 SINE B2 2 64 -131 5 643 181 85 20 60 chrX 7672500 7672550 -158977746 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 5 643 1222 35 7 0 chrX 7672550 7672694 -158977602 - B1_Mm SINE Alu -1 146 2 5 643 297 0 0 0 chrX 7672860 7672893 -158977403 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 643 34 24 0 0 chrX 7673143 7673184 -158977112 + AT_rich Low_complexity Low_complexity 1 41 0 5 643 253 229 100 40 chrX 7673198 7673298 -158976998 - PB1D10 SINE Alu -9 108 3 5 643 465 256 16 23 chrX 7673384 7673512 -158976784 + B1F SINE Alu 22 148 -1 5 643 244 255 149 0 chrX 7674507 7674601 -158975695 + B1_Mur3 SINE Alu 36 143 -6 5 643 352 122 8 51 chrX 7674585 7674652 -158975644 + B2_Mm2 SINE B2 47 114 -102 5 643 1191 61 7 0 chrX 7674684 7674831 -158975465 - B1_Mus1 SINE Alu 0 148 1 5 643 437 53 0 0 chrX 7674866 7674923 -158975373 + B1_Mm SINE Alu 91 147 0 5 643 470 259 88 15 chrX 7675188 7675325 -158974971 - B1_Mur1 SINE Alu -1 148 2 5 643 266 269 33 28 chrX 7675359 7675482 -158974814 - BC1_Mm scRNA scRNA -27 125 2 5 643 1242 90 15 55 chrX 7675484 7675683 -158974613 - B2_Mm1t SINE B2 0 193 3 5 643 1257 101 62 0 chrX 7675686 7675865 -158974431 - B2_Mm2 SINE B2 -5 190 1 5 643 379 204 133 0 chrX 7675913 7675988 -158974308 - B1_Mus2 SINE Alu -16 131 51 5 643 208 0 0 160 chrX 7675988 7676169 -158974127 + (CCCTG)n Simple_repeat Simple_repeat 4 155 0 5 643 379 238 115 7 chrX 7676169 7676206 -158974090 - B1_Mus2 SINE Alu -99 50 13 5 643 201 154 0 0 chrX 7676223 7676262 -158974034 + T-rich Low_complexity Low_complexity 4 42 0 5 643 1013 136 0 7 chrX 7676263 7676411 -158973885 - B1_Mus1 SINE Alu -1 147 1 5 643 236 217 141 28 chrX 7676418 7676489 -158973807 + ID4 SINE ID 2 80 -3 5 643 234 0 0 0 chrX 7676515 7676541 -158973755 + (A)n Simple_repeat Simple_repeat 1 26 0 5 643 777 194 7 20 chrX 7676552 7676699 -158973597 + B1_Mur4 SINE Alu 1 145 -5 5 643 434 309 35 14 chrX 7676718 7676859 -158973437 + RSINE1 SINE B4 3 146 -19 5 643 240 35 0 0 chrX 7676921 7676950 -158973346 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 643 333 0 0 0 chrX 7677583 7677620 -158972676 + (GA)n Simple_repeat Simple_repeat 1 37 0 5 643 633 176 0 0 chrX 7677667 7677775 -158972521 + PB1D9 SINE Alu 2 109 -11 5 643 405 0 0 0 chrX 7678589 7678634 -158971662 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 643 354 283 87 0 chrX 7678640 7678732 -158971564 + PB1 SINE Alu 21 120 -7 5 643 232 120 40 0 chrX 7678759 7678809 -158971487 + GA-rich Low_complexity Low_complexity 3 54 0 5 643 597 262 156 0 chrX 7678845 7678986 -158971310 + RSINE1 SINE B4 3 165 0 5 643 323 181 0 14 chrX 7678986 7679059 -158971237 + (CA)n Simple_repeat Simple_repeat 1 72 0 5 643 375 272 58 0 chrX 7679079 7679182 -158971114 + PB1D7 SINE Alu 1 109 -11 5 643 378 0 0 0 chrX 7679182 7679224 -158971072 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 5 643 204 64 42 21 chrX 7679253 7679301 -158970995 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 5 643 398 339 53 17 chrX 7679312 7679501 -158970795 + MIR SINE MIR 29 225 -37 5 643 937 294 145 5 chrX 7679545 7679924 -158970372 + FordPrefect DNA Tip100 979 1410 -273 5 643 232 336 26 17 chrX 7679926 7680035 -158970261 + PB1 SINE Alu 1 112 -15 5 643 1061 49 21 0 chrX 7680035 7680177 -158970119 + (TTTTC)n Simple_repeat Simple_repeat 5 149 0 5 643 525 32 0 0 chrX 7680182 7680245 -158970051 + (TC)n Simple_repeat Simple_repeat 2 64 0 5 643 1158 68 0 0 chrX 7680245 7680393 -158969903 - B1_Mus1 SINE Alu 0 148 1 5 643 352 247 0 52 chrX 7680437 7680514 -158969782 + PB1D10 SINE Alu 22 94 -23 5 643 1260 86 41 36 chrX 7680515 7680548 -158969748 - B2_Mm2 SINE B2 0 195 163 5 643 252 0 0 0 chrX 7680548 7680576 -158969720 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 5 643 1260 86 41 36 chrX 7680576 7680736 -158969560 - B2_Mm2 SINE B2 -33 162 1 5 643 600 155 29 0 chrX 7680740 7680843 -158969453 - B1_Mus2 SINE Alu 0 147 42 5 643 29 28 0 0 chrX 7680948 7680984 -158969312 + AT_rich Low_complexity Low_complexity 1 36 0 5 643 569 245 66 48 chrX 7680989 7681156 -158969140 + Lx8 LINE L1 7174 7343 -130 5 643 1488 73 5 5 chrX 7681161 7681354 -158968942 + B2_Mm1a SINE B2 1 193 0 5 643 237 108 0 0 chrX 7681354 7681391 -158968905 + (GGAAA)n Simple_repeat Simple_repeat 2 38 0 5 643 796 227 87 6 chrX 7681391 7681564 -158968732 + B3A SINE B2 1 187 -11 5 643 275 72 0 23 chrX 7681575 7681618 -158968678 + (TAA)n Simple_repeat Simple_repeat 3 44 0 5 643 1362 79 17 0 chrX 7681685 7681862 -158968434 + B2_Mm2 SINE B2 2 181 -14 5 643 1137 87 11 34 chrX 7681942 7682088 -158968208 + B2_Mm1a SINE B2 2 148 -45 5 643 437 34 0 17 chrX 7682088 7682148 -158968148 + (CATA)n Simple_repeat Simple_repeat 2 60 0 5 643 1137 87 11 34 chrX 7682148 7682179 -158968117 + B2_Mm1a SINE B2 149 175 -18 5 643 413 345 23 23 chrX 7682192 7682367 -158967929 + FordPrefect DNA Tip100 1432 1606 -77 5 643 247 228 142 0 chrX 7683374 7683485 -158966811 + B3A SINE B2 37 172 -23 5 643 415 247 50 30 chrX 7683481 7683497 -158966799 + MLT1F2 LTR MaLR 17 32 -528 5 643 2393 152 5 3 chrX 7683497 7683880 -158966416 + ORR1C2 LTR MaLR 1 384 0 5 643 415 225 60 10 chrX 7683880 7683972 -158966324 + MLT1F2 LTR MaLR 33 127 -442 5 643 356 344 31 0 chrX 7684416 7684526 -158965770 + B1F2 SINE Alu 3 115 -5 5 643 354 94 0 0 chrX 7684529 7684535 -158965761 + (GGAA)n Simple_repeat Simple_repeat 1 6 0 5 643 1323 99 21 5 chrX 7684535 7684727 -158965569 + B2_Mm2 SINE B2 1 195 0 5 643 354 94 0 0 chrX 7684727 7684773 -158965523 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 5 643 231 91 91 0 chrX 7684773 7684828 -158965468 + B2_Mm1t SINE B2 134 193 0 5 643 2133 155 82 21 chrX 7684880 7685268 -158965028 - MTD LTR MaLR -2 417 6 5 643 437 251 31 65 chrX 7685290 7685459 -158964837 + B4A SINE B4 6 164 -60 5 643 3085 117 40 4 chrX 7685538 7686044 -158964252 + RLTR28 LTR ERVL 1 524 0 5 643 369 131 0 0 chrX 7686108 7686169 -158964127 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 643 1213 48 143 0 chrX 7686241 7686409 -158963887 + B2_Mm2 SINE B2 3 194 -1 5 643 296 281 201 30 chrX 7686477 7686646 -158963650 - L1MA4 LINE L1 -408 5892 5695 5 643 642 298 131 31 chrX 7686692 7686952 -158963344 - RMER15 LTR ERVL -111 464 179 5 643 2878 168 156 46 chrX 7686968 7687654 -158962642 - Lx4A LINE L1 -477 6581 5812 5 643 1073 95 0 0 chrX 7687654 7687791 -158962505 - B1_Mus1 SINE Alu -10 138 2 5 643 2878 176 97 50 chrX 7687791 7687927 -158962369 - Lx4A LINE L1 -1247 5811 5677 5 643 829 171 7 14 chrX 7687927 7688069 -158962227 + B1_Mur3 SINE Alu 9 149 0 5 643 568 268 101 13 chrX 7688133 7688360 -158961936 - L1MA4 LINE L1 -620 5680 5434 5 643 1463 80 16 0 chrX 7688362 7688550 -158961746 - B2_Mm2 SINE B2 -4 191 1 5 643 347 217 106 21 chrX 7688567 7688661 -158961635 - ID_B1 SINE B4 0 224 123 5 643 746 246 34 27 chrX 7688695 7688922 -158961374 - L1MA4 LINE L1 -1098 5045 4818 5 643 1122 109 10 54 chrX 7688922 7689125 -158961171 - B2_Mm2 SINE B2 -1 194 1 5 643 746 253 24 100 chrX 7689125 7689223 -158961073 - L1MA4 LINE L1 -1326 4817 4700 5 643 647 246 49 0 chrX 7689267 7689409 -158960887 - RSINE1 SINE B4 -14 151 3 5 643 335 68 0 0 chrX 7689435 7689479 -158960817 + B2_Mm2 SINE B2 1 44 -151 5 643 366 275 55 6 chrX 7689479 7689662 -158960634 - L1MA4 LINE L1 -1661 4482 4291 5 643 1225 74 0 0 chrX 7689704 7689852 -158960444 + B1_Mus1 SINE Alu 1 148 0 6 643 262 59 58 19 chrX 7689862 7689914 -158960382 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 6 643 1349 77 243 17 chrX 7689914 7690153 -158960143 + ORR1A2 LTR MaLR 27 319 -8 6 643 963 206 12 12 chrX 7690529 7690701 -158959595 - B3 SINE B2 -44 172 1 6 643 273 98 0 0 chrX 7690858 7690899 -158959397 + (T)n Simple_repeat Simple_repeat 1 41 0 6 643 1394 75 16 11 chrX 7690927 7691115 -158959181 + B2_Mm2 SINE B2 1 189 -6 6 643 894 177 0 13 chrX 7691138 7691287 -158959009 - B1_Mur3 SINE Alu 0 149 3 6 643 279 227 0 0 chrX 7691291 7691357 -158958939 + T-rich Low_complexity Low_complexity 1 66 0 6 643 1141 81 0 20 chrX 7691359 7691510 -158958786 - B1_Mus1 SINE Alu 0 148 1 6 643 1234 77 42 0 chrX 7691510 7691678 -158958618 - B2_Mm2 SINE B2 0 195 21 6 643 1381 54 0 46 chrX 7691796 7691990 -158958306 + B2_Mm2 SINE B2 1 185 -10 6 643 978 102 29 14 chrX 7692311 7692450 -158957846 + B1_Mur4 SINE Alu 5 145 -5 6 643 543 175 31 217 chrX 7692466 7692692 -158957604 + B2_Mm2 SINE B2 2 185 -10 6 643 835 104 64 0 chrX 7692696 7692821 -158957475 + B2_Mm2 SINE B2 1 133 -62 6 643 277 279 38 0 chrX 7692828 7692907 -158957389 + ID4_ SINE ID 1 82 -1 6 643 1246 133 0 6 chrX 7692989 7693171 -158957125 + B2_Mm2 SINE B2 1 181 -14 6 643 1420 53 5 41 chrX 7693236 7693433 -158956863 + B2_Mm2 SINE B2 2 191 -4 6 643 487 270 96 53 chrX 7694089 7694110 -158956186 - B3A SINE B2 0 198 184 6 643 183 42 0 0 chrX 7694110 7694134 -158956162 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 643 487 270 96 53 chrX 7694134 7694300 -158955996 - B3A SINE B2 -15 183 3 6 643 538 98 4 1 chrX 7694349 7694433 -158955863 - B1_Mur4 SINE Alu 0 150 32 6 643 736 156 0 62 chrX 7694906 7695036 -158955260 - B1_Mus2 SINE Alu -5 142 21 6 643 396 234 99 130 chrX 7694943 7695105 -158955191 - MT2B LTR ERVL -341 260 104 6 643 819 219 71 28 chrX 7695292 7695503 -158954793 + ID_B1 SINE B4 5 224 0 6 643 279 0 0 0 chrX 7695604 7695635 -158954661 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 643 217 206 349 0 chrX 7695836 7695899 -158954397 - B1_Mus1 SINE Alu -62 86 2 6 643 1458 60 38 0 chrX 7695909 7696092 -158954204 - B2_Mm2 SINE B2 -5 190 1 6 643 1510 122 135 28 chrX 7696192 7696480 -158953816 - ORR1A4 LTR MaLR -3 326 8 6 643 466 241 0 0 chrX 7696675 7696762 -158953534 + PB1D7 SINE Alu 2 88 -32 6 643 1106 204 14 24 chrX 7696776 7696987 -158953309 - B3 SINE B2 0 216 8 6 643 684 196 0 76 chrX 7697047 7697191 -158953105 - B1_Mur1 SINE Alu -15 134 2 6 643 4638 60 5 27 chrX 7697240 7697840 -158952456 - LTRIS_Mus LTR ERV1 0 587 1 6 643 588 202 67 0 chrX 7697871 7697990 -158952306 + ID_B1 SINE B4 92 218 -6 6 643 386 208 69 0 chrX 7697995 7698096 -158952200 + B1F SINE Alu 42 149 0 6 643 489 255 0 9 chrX 7698162 7698269 -158952027 + RLTR18B LTR ERVK 42 147 -365 6 643 365 256 0 13 chrX 7698442 7698521 -158951775 + RLTR18B LTR ERVK 120 197 -315 6 643 747 143 16 25 chrX 7698515 7698619 -158951677 + B2_Mm2 SINE B2 54 158 -37 6 643 243 0 0 0 chrX 7698619 7698646 -158951650 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 6 643 747 143 16 25 chrX 7698646 7698663 -158951633 + B2_Mm2 SINE B2 159 174 -21 6 643 924 164 0 0 chrX 7698740 7698880 -158951416 + B1_Mus2 SINE Alu 1 140 -7 6 643 363 212 0 0 chrX 7698913 7698993 -158951303 + (TA)n Simple_repeat Simple_repeat 1 80 0 6 643 666 277 28 0 chrX 7698993 7699170 -158951126 - B3A SINE B2 -16 182 1 6 643 1182 55 7 0 chrX 7699235 7699381 -158950915 + B1_Mm SINE Alu 1 147 0 6 643 1376 82 11 0 chrX 7699502 7699685 -158950611 + B2_Mm1t SINE B2 1 185 -8 6 643 239 288 74 12 chrX 7700733 7700814 -158949482 + MER68 LTR ERVL 2 87 -476 6 643 1133 222 53 7 chrX 7701851 7702169 -158948127 - MER47A DNA MER2_type 0 366 25 6 643 277 364 10 0 chrX 7702194 7702293 -158948003 + L2a LINE L2 3278 3377 -49 6 643 263 359 51 0 chrX 7702302 7702419 -158947877 + L2a LINE L2 3278 3400 -26 6 643 252 176 0 14 chrX 7702445 7702494 -158947802 + L2b LINE L2 3336 3385 -2 6 643 490 291 17 0 chrX 7703454 7703571 -158946725 - PB1 SINE Alu -2 125 7 6 643 252 333 14 0 chrX 7703510 7703579 -158946717 - B4A SINE B4 -140 152 83 6 643 1019 198 33 14 chrX 7703592 7703802 -158946494 - B3 SINE B2 -2 214 1 6 643 598 236 9 41 chrX 7703817 7703960 -158946336 - B1_Mur1 SINE Alu -2 147 3 6 643 356 234 52 0 chrX 7704090 7704167 -158946129 + ID4_ SINE ID 3 83 0 6 643 379 245 93 47 chrX 7704246 7704353 -158945943 + RSINE1 SINE B4 35 146 -19 6 643 204 40 0 0 chrX 7704356 7704381 -158945915 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 643 337 274 0 0 chrX 7704423 7704496 -158945800 - BC1_Mm scRNA scRNA -62 90 18 6 643 284 259 86 0 chrX 7704496 7704577 -158945719 + MIR SINE MIR 175 262 0 6 643 474 163 0 0 chrX 7704655 7704753 -158945543 + (TA)n Simple_repeat Simple_repeat 1 98 0 6 643 298 290 0 0 chrX 7704778 7704847 -158945449 - ID4_ SINE ID -13 70 2 6 643 1041 71 57 0 chrX 7706854 7706994 -158943302 - B1_Mus1 SINE Alu 0 148 1 6 643 620 181 102 8 chrX 7707510 7707638 -158942658 + B1F SINE Alu 5 144 -5 6 643 1349 42 0 18 chrX 7707647 7707806 -158942490 + B2_Mm1a SINE B2 2 160 -33 6 643 216 0 0 0 chrX 7707806 7707830 -158942466 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 6 643 189 370 0 42 chrX 7707875 7707971 -158942325 + L2 LINE L2 2676 2767 -652 6 643 272 324 0 13 chrX 7708147 7708222 -158942074 - ID4 SINE ID -1 82 9 6 643 314 205 40 43 chrX 7710590 7710674 -158939622 + B1F SINE Alu 41 122 -27 6 643 1258 34 0 0 chrX 7710693 7710839 -158939457 + B1_Mm SINE Alu 2 147 0 6 643 981 220 190 8 chrX 7710869 7711116 -158939180 - MTD LTR MaLR -125 294 3 6 643 235 269 0 0 chrX 7711345 7711397 -158938899 - ID4 SINE ID -1 82 31 6 643 471 280 42 17 chrX 7711404 7711524 -158938772 - ID_B1 SINE B4 -2 222 100 6 643 587 264 13 34 chrX 7711533 7711682 -158938614 - ID_B1 SINE B4 -2 222 77 6 643 418 261 117 0 chrX 7711677 7711788 -158938508 - PB1 SINE Alu -2 125 2 6 643 1241 110 6 0 chrX 7711960 7712133 -158938163 + B2_Mm1t SINE B2 1 174 -19 6 643 1059 63 28 7 chrX 7712146 7712289 -158938007 + B1_Mm SINE Alu 2 147 0 6 643 288 260 96 0 chrX 7712354 7712427 -158937869 - RSINE1 SINE B4 -83 82 3 6 643 283 270 214 9 chrX 7712585 7712697 -158937599 + MIR SINE MIR 80 214 -48 6 643 1185 105 50 0 chrX 7712753 7712934 -158937362 - B2_Mm1a SINE B2 -2 191 2 6 643 823 214 26 11 chrX 7712996 7713184 -158937112 + B3A SINE B2 2 193 -23 6 643 403 241 35 0 chrX 7713357 7713444 -158936852 + B3 SINE B2 42 131 -85 6 643 261 0 0 0 chrX 7713500 7713529 -158936767 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 6 643 324 215 273 27 chrX 7713529 7713639 -158936657 - B1_Mur2 SINE Alu -12 137 1 6 643 267 240 0 0 chrX 7715028 7715078 -158935218 - B4A SINE B4 -237 55 6 6 643 237 43 255 0 chrX 7715153 7715200 -158935096 - Lx2A LINE L1 -22 6986 6928 6 643 450 279 101 14 chrX 7715393 7715531 -158934765 + RSINE1 SINE B4 14 163 -2 6 643 688 71 304 0 chrX 7715693 7715805 -158934491 + B1_Mus1 SINE Alu 2 147 -1 6 643 1059 77 21 7 chrX 7715841 7715985 -158934311 + B1_Mus1 SINE Alu 2 147 -1 6 643 267 175 34 34 chrX 7716015 7716074 -158934222 + B3 SINE B2 72 130 -86 6 643 32 26 0 0 chrX 7716100 7716139 -158934157 + AT_rich Low_complexity Low_complexity 1 39 0 6 643 1148 83 41 17 chrX 7716569 7716741 -158933555 + B2_Mm2 SINE B2 2 177 -18 6 643 1107 109 86 0 chrX 7718938 7719113 -158931183 + B2_Mm1t SINE B2 1 190 -3 6 643 292 248 223 0 chrX 7723823 7723944 -158926352 - B1F SINE Alu 0 149 2 6 643 296 266 0 0 chrX 7724059 7724123 -158926173 + ID4_ SINE ID 9 72 -11 6 643 301 248 184 44 chrX 7724166 7724280 -158926016 + B1F SINE Alu 19 148 -1 6 643 399 273 38 14 chrX 7724397 7724512 -158925784 + B1F SINE Alu 1 121 -6 6 643 548 316 109 37 chrX 7724534 7724934 -158925362 + MLT1F1 LTR MaLR 50 511 -49 6 643 396 0 0 0 chrX 7725115 7725159 -158925137 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 643 400 196 61 20 chrX 7725199 7725298 -158924998 - B1F SINE Alu -13 136 34 6 643 376 330 134 8 chrX 7725298 7725318 -158924978 - ID_B1 SINE B4 -13 211 78 6 643 384 258 52 0 chrX 7725321 7725418 -158924878 - PB1 SINE Alu -3 124 23 6 643 748 204 42 7 chrX 7725452 7725595 -158924701 - B1_Mur1 SINE Alu -1 148 1 6 643 1115 202 9 27 chrX 7725743 7725962 -158924334 + MTD LTR MaLR 2 216 -203 6 643 980 198 119 173 chrX 7725968 7726469 -158923827 + MT2B LTR ERVL 1 601 0 6 643 638 163 185 25 chrX 7726469 7726624 -158923672 + MTD LTR MaLR 240 419 0 6 643 675 204 95 7 chrX 7726741 7726889 -158923407 - RSINE1 SINE B4 -2 163 3 7 643 1218 54 0 0 chrX 7726993 7727140 -158923156 + B1_Mus1 SINE Alu 2 148 0 7 643 303 127 0 0 chrX 7727140 7727203 -158923093 + (A)n Simple_repeat Simple_repeat 1 63 0 7 643 1068 195 36 0 chrX 7727272 7727467 -158922829 - B3 SINE B2 -11 205 4 7 643 413 321 43 1 chrX 7727529 7727655 -158922641 + ID_B1 SINE B4 11 143 -149 7 643 683 310 22 17 chrX 7727778 7727985 -158922311 + MLT1F1 LTR MaLR 371 578 -1 7 643 456 305 26 38 chrX 7728555 7728732 -158921564 + B3 SINE B2 14 195 0 7 643 21 0 0 0 chrX 7728820 7728841 -158921455 + AT_rich Low_complexity Low_complexity 1 21 0 7 643 671 164 63 32 chrX 7728861 7728987 -158921309 - B1_Mur3 SINE Alu -19 130 1 7 643 387 297 91 30 chrX 7729014 7729146 -158921150 - RSINE1 SINE B4 -25 140 1 7 643 1449 73 10 5 chrX 7729383 7729575 -158920721 + B2_Mm1t SINE B2 1 193 0 7 643 236 0 0 0 chrX 7729587 7729619 -158920677 + B1_Mur4 SINE Alu 118 149 -1 7 643 1063 63 28 7 chrX 7729650 7729794 -158920502 + B1_Mus2 SINE Alu 1 147 0 7 643 1191 166 0 0 chrX 7729808 7729989 -158920307 + B3 SINE B2 27 207 -9 7 643 644 133 144 9 chrX 7730001 7730137 -158920159 + B1F2 SINE Alu 16 149 0 7 643 333 314 19 28 chrX 7730617 7730725 -158919571 - PB1D10 SINE Alu -8 109 3 7 643 304 220 34 0 chrX 7730795 7730854 -158919442 - B3A SINE B2 -108 90 30 7 643 587 147 102 19 chrX 7730850 7730998 -158919298 - B3 SINE B2 -21 174 20 7 643 860 153 15 0 chrX 7731017 7731154 -158919142 - B1_Mur3 SINE Alu 0 149 11 7 643 322 260 125 82 chrX 7731043 7731227 -158919069 - MT2B2 LTR ERVL -308 276 85 7 644 279 0 0 0 chrX 7734044 7734075 -158916221 + (TAA)n Simple_repeat Simple_repeat 2 32 0 7 644 381 215 0 81 chrX 7734190 7734276 -158916020 + PB1D10 SINE Alu 36 114 -3 7 644 874 142 21 21 chrX 7734282 7734426 -158915870 + B1_Mur2 SINE Alu 6 149 0 7 644 242 281 47 0 chrX 7734453 7734517 -158915779 + RSINE1 SINE B4 22 88 -77 7 644 26 30 0 0 chrX 7734616 7734649 -158915647 + AT_rich Low_complexity Low_complexity 1 33 0 7 644 968 92 8 0 chrX 7734649 7734780 -158915516 - B2_Mm2 SINE B2 -61 134 3 7 644 245 201 0 96 chrX 7734814 7734884 -158915412 - BC1_Mm scRNA scRNA -10 73 10 7 644 455 200 53 71 chrX 7734908 7735021 -158915275 - PB1 SINE Alu -8 119 9 7 644 208 324 125 19 chrX 7735046 7735150 -158915146 - MIRb SINE MIR -128 140 26 7 644 1231 54 0 0 chrX 7735591 7735739 -158914557 - B1_Mus1 SINE Alu 0 148 1 7 644 1119 99 68 0 chrX 7735838 7736000 -158914296 + B2_Mm2 SINE B2 5 177 -18 7 644 797 166 27 7 chrX 7736130 7736276 -158914020 + B1_Mur4 SINE Alu 1 149 -1 7 644 1188 164 15 10 chrX 7736280 7736483 -158913813 - B3 SINE B2 -11 205 2 7 644 533 335 50 11 chrX 7736496 7736677 -158913619 - B3A SINE B2 0 198 11 7 644 731 240 19 18 chrX 7736674 7736889 -158913407 - B3A SINE B2 -6 210 1 7 644 21 0 0 0 chrX 7736889 7736910 -158913386 + AT_rich Low_complexity Low_complexity 1 21 0 7 644 1167 92 67 22 chrX 7736917 7737095 -158913201 + B2_Mm1t SINE B2 1 186 -7 7 644 693 162 83 62 chrX 7737106 7737251 -158913045 + B1_Mur3 SINE Alu 2 149 0 7 644 393 280 223 39 chrX 7737273 7737403 -158912893 - RSINE1 SINE B4 -4 161 8 7 644 375 23 0 0 chrX 7737460 7737504 -158912792 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 644 1240 72 6 6 chrX 7737594 7737762 -158912534 + B2_Mm2 SINE B2 2 169 -26 7 644 561 42 0 0 chrX 7737762 7737834 -158912462 + (CA)n Simple_repeat Simple_repeat 1 72 0 7 644 459 0 0 0 chrX 7737834 7737884 -158912412 + (TA)n Simple_repeat Simple_repeat 1 51 0 7 644 288 0 0 0 chrX 7737884 7737915 -158912381 + (GA)n Simple_repeat Simple_repeat 2 33 0 7 644 552 239 68 8 chrX 7737916 7738034 -158912262 - B1F SINE Alu -20 129 5 7 644 186 292 140 40 chrX 7738320 7738520 -158911776 + L2 LINE L2 2481 2700 -719 7 644 523 92 11 54 chrX 7738642 7738734 -158911562 + B1_Mus2 SINE Alu 60 147 0 7 644 973 225 14 9 chrX 7738883 7739098 -158911198 + B3 SINE B2 1 216 0 7 644 717 158 36 50 chrX 7739138 7739278 -158911018 + B1_Mus2 SINE Alu 2 139 -8 7 644 1073 115 14 0 chrX 7739453 7739601 -158910695 - B1_Mur4 SINE Alu 0 150 1 7 644 21 36 0 0 chrX 7739601 7739629 -158910667 + AT_rich Low_complexity Low_complexity 1 28 0 7 644 318 318 0 0 chrX 7739650 7739735 -158910561 + B1F SINE Alu 58 142 -7 7 644 1232 48 0 0 chrX 7739744 7739891 -158910405 + B1_Mus2 SINE Alu 1 147 0 7 644 221 0 0 33 chrX 7739894 7739924 -158910372 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 644 632 331 29 13 chrX 7740260 7740499 -158909797 + MER46C DNA MER2_type 30 272 -66 7 644 1230 48 0 0 chrX 7740542 7740688 -158909608 + B1_Mus2 SINE Alu 2 147 0 7 644 306 107 0 0 chrX 7740688 7740744 -158909552 + (A)n Simple_repeat Simple_repeat 1 56 0 7 644 558 169 0 0 chrX 7740927 7741016 -158909280 + PB1D9 SINE Alu 27 115 -5 7 644 219 69 0 0 chrX 7741039 7741068 -158909228 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 644 748 228 31 31 chrX 7741075 7741108 -158909188 + B3 SINE B2 3 35 -181 7 644 1071 52 0 69 chrX 7741108 7741252 -158909044 + B1_Mm SINE Alu 1 134 -13 7 644 221 0 35 0 chrX 7741252 7741281 -158909015 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 7 644 748 228 31 31 chrX 7741281 7741409 -158908887 + B3 SINE B2 36 164 -52 7 644 450 0 0 0 chrX 7741409 7741459 -158908837 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 644 584 281 12 50 chrX 7741459 7741609 -158908687 - B3A SINE B2 -50 148 2 7 644 882 232 34 5 chrX 7741634 7741842 -158908454 - B3 SINE B2 -2 214 1 7 644 335 230 115 39 chrX 7741854 7741958 -158908338 - B1F SINE Alu 0 149 38 7 644 382 219 33 54 chrX 7741999 7742155 -158908141 - B1F SINE Alu -12 137 1 7 644 276 293 56 163 chrX 7742155 7742209 -158908087 - ID SINE ID -165 59 27 7 644 1430 74 26 5 chrX 7742215 7742405 -158907891 - B2_Mm2 SINE B2 0 195 2 7 644 291 54 0 0 chrX 7742453 7742490 -158907806 + (T)n Simple_repeat Simple_repeat 1 37 0 7 644 764 95 0 0 chrX 7742526 7742631 -158907665 + B1_Mus2 SINE Alu 37 141 -6 7 644 279 0 0 0 chrX 7742680 7742711 -158907585 + (TAA)n Simple_repeat Simple_repeat 2 32 0 7 644 1085 180 19 10 chrX 7742860 7743068 -158907228 + B3 SINE B2 1 210 -6 7 644 969 136 55 38 chrX 7743105 7743288 -158907008 + B2_Mm2 SINE B2 2 187 -8 7 644 570 256 25 31 chrX 7743323 7743495 -158906801 + B3 SINE B2 17 185 -10 7 644 1163 61 0 26 chrX 7743713 7743864 -158906432 - B1_Mus1 SINE Alu 0 148 2 7 644 442 222 0 0 chrX 7743899 7743980 -158906316 - ID4 SINE ID -1 82 2 7 644 1305 83 0 0 chrX 7744491 7744671 -158905625 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 644 225 0 0 0 chrX 7744699 7744724 -158905572 + (TC)n Simple_repeat Simple_repeat 1 25 0 7 644 321 306 12 0 chrX 7744812 7744897 -158905399 - B3A SINE B2 -112 86 1 7 644 509 135 0 101 chrX 7744915 7745014 -158905282 + B1_Mus1 SINE Alu 5 93 -55 7 644 553 125 0 54 chrX 7744989 7745082 -158905214 - B1_Mm SINE Alu -57 90 3 7 644 260 321 136 127 chrX 7745260 7745481 -158904815 + B4 SINE B4 52 274 -18 7 644 507 45 0 0 chrX 7745488 7745554 -158904742 + (CA)n Simple_repeat Simple_repeat 1 66 0 7 644 450 360 16 16 chrX 7745569 7745761 -158904535 + B4A SINE B4 99 290 -2 7 644 429 222 0 0 chrX 7745844 7745925 -158904371 + ID4_ SINE ID 2 82 -1 7 644 537 256 67 8 chrX 7746085 7746219 -158904077 + RSINE1 SINE B4 5 146 -19 7 644 563 267 8 16 chrX 7746252 7746374 -158903922 + RSINE1 SINE B4 45 165 0 7 644 649 228 8 24 chrX 7746652 7746778 -158903518 - B3 SINE B2 -87 129 6 7 644 870 242 33 157 chrX 7746828 7747039 -158903257 + B4A SINE B4 29 230 -62 7 644 945 164 0 7 chrX 7747039 7747186 -158903110 + B1_Mur3 SINE Alu 3 148 -1 7 644 870 242 33 157 chrX 7747186 7747273 -158903023 + B4A SINE B4 231 290 -2 7 644 258 289 0 13 chrX 7747527 7747604 -158902692 + CT-rich Low_complexity Low_complexity 1 76 0 7 644 948 101 0 0 chrX 7747633 7747771 -158902525 - B1_Mur4 SINE Alu 0 150 13 7 644 566 256 25 37 chrX 7747771 7747795 -158902501 - ID_B1 SINE B4 0 224 65 7 644 643 273 20 20 chrX 7747951 7748104 -158902192 + RSINE1 SINE B4 3 155 -10 7 644 303 93 0 0 chrX 7748114 7748157 -158902139 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 644 218 295 16 16 chrX 7748216 7748278 -158902018 + PB1D10 SINE Alu 50 111 -6 7 644 261 0 0 0 chrX 7748280 7748309 -158901987 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 7 644 331 305 14 92 chrX 7748309 7748450 -158901846 + ID_B1 SINE B4 10 139 -85 7 644 501 265 67 15 chrX 7748402 7748536 -158901760 + B1F2 SINE Alu 7 147 -2 7 644 1014 198 43 14 chrX 7748592 7748802 -158901494 + B3 SINE B2 1 216 0 8 644 240 152 41 75 chrX 7749234 7749303 -158900993 - PB1 SINE Alu -1 126 62 8 644 280 277 121 0 chrX 7750635 7750718 -158899578 - PB1D10 SINE Alu 0 117 25 8 644 800 169 22 0 chrX 7750765 7750901 -158899395 - B1_Mur3 SINE Alu -9 140 2 8 644 1072 134 0 13 chrX 7750978 7751129 -158899167 - B1_Mur4 SINE Alu -1 149 1 8 644 267 274 247 18 chrX 7751483 7751706 -158898590 - L2 LINE L2 -437 2982 2709 8 644 213 121 0 0 chrX 7753473 7753506 -158896790 + (TTTC)n Simple_repeat Simple_repeat 4 36 0 8 644 252 0 0 0 chrX 7753850 7753878 -158896418 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 8 644 1203 36 0 0 chrX 7753878 7754016 -158896280 - B1_Mus1 SINE Alu -9 139 2 8 644 866 154 28 7 chrX 7754225 7754369 -158895927 - B1_Mur4 SINE Alu -1 149 3 8 644 491 250 142 0 chrX 7754394 7754514 -158895782 - B1_Mur1 SINE Alu -11 138 2 8 644 213 39 0 0 chrX 7754537 7754563 -158895733 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 8 644 1259 75 0 0 chrX 7754563 7754723 -158895573 - B2_Mm2 SINE B2 -34 161 2 8 644 722 231 0 33 chrX 7754745 7754897 -158895399 - RSINE1 SINE B4 -8 157 11 8 644 552 30 0 0 chrX 7754904 7754970 -158895326 + (TCTA)n Simple_repeat Simple_repeat 2 67 0 8 644 672 223 87 56 chrX 7754975 7755170 -158895126 - ID_B1 SINE B4 -19 205 5 8 644 21 0 0 0 chrX 7755189 7755210 -158895086 + AT_rich Low_complexity Low_complexity 1 21 0 8 644 1551 22 39 0 chrX 7755245 7755423 -158894873 + B2_Mm1a SINE B2 1 185 -8 8 644 1136 62 7 0 chrX 7755723 7755868 -158894428 - B1_Mus1 SINE Alu -1 147 2 8 644 221 282 14 27 chrX 7755964 7756037 -158894259 - MIR SINE MIR -60 202 131 8 644 868 265 110 15 chrX 7757154 7757418 -158892878 + MLT1B LTR MaLR 22 310 -80 8 644 722 128 16 33 chrX 7757531 7757652 -158892644 - B1_Mur4 SINE Alu -2 148 30 8 644 351 152 137 32 chrX 7757577 7757672 -158892624 - MT2B LTR ERVL -344 257 153 8 644 1302 102 37 5 chrX 7757684 7757871 -158892425 - B2_Mm2 SINE B2 -2 193 1 8 644 319 284 14 0 chrX 7757882 7757956 -158892340 - PB1D10 SINE Alu -7 110 36 8 644 645 298 190 44 chrX 7758223 7758368 -158891928 + MLT1A0 LTR MaLR 4 146 -219 8 644 1057 52 44 0 chrX 7758368 7758503 -158891793 - B1_Mus1 SINE Alu -7 141 1 8 644 645 298 190 44 chrX 7758503 7758673 -158891623 + MLT1A0 LTR MaLR 147 364 -1 8 644 927 198 13 119 chrX 7758698 7758933 -158891363 + B3 SINE B2 2 211 -5 8 644 469 260 210 17 chrX 7758952 7759128 -158891168 + MLT1A0-int LTR MaLR 259 468 -903 8 644 700 209 22 0 chrX 7759131 7759265 -158891031 + B1F SINE Alu 12 148 -1 8 644 297 184 118 0 chrX 7759306 7759382 -158890914 + MLT1A0-int LTR MaLR 457 541 -830 8 644 1489 66 11 0 chrX 7759383 7759566 -158890730 + B2_Mm2 SINE B2 1 185 -10 8 644 486 148 208 80 chrX 7759613 7759738 -158890558 + B1_Mus2 SINE Alu 1 141 -6 8 644 557 283 38 27 chrX 7759760 7759942 -158890354 + MLT1A0-int LTR MaLR 534 729 -642 8 644 232 266 252 28 chrX 7760162 7760305 -158889991 + MLT1A0-int LTR MaLR 951 1125 -246 8 644 511 212 0 10 chrX 7760327 7760427 -158889869 - PB1D9 SINE Alu -13 107 9 8 644 313 302 37 28 chrX 7760332 7760441 -158889855 - B4 SINE B4 -101 191 82 8 644 2038 138 110 20 chrX 7760480 7760880 -158889416 + RMER10A LTR ERVL 2 437 -5 8 644 544 279 83 83 chrX 7760976 7761041 -158889255 + B3 SINE B2 9 67 -149 8 644 1228 41 0 13 chrX 7761041 7761190 -158889106 - B1_Mm SINE Alu 0 147 1 8 644 544 279 75 86 chrX 7761190 7761321 -158888975 + B3 SINE B2 67 188 -28 8 644 328 307 79 0 chrX 7761332 7761459 -158888837 + B1F1 SINE Alu 1 137 -12 8 644 207 0 0 0 chrX 7761461 7761484 -158888812 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 8 644 295 182 0 52 chrX 7761530 7761580 -158888716 + B1F SINE Alu 90 139 -10 8 644 243 61 0 0 chrX 7761580 7761613 -158888683 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 8 644 322 278 20 10 chrX 7761718 7761816 -158888480 + MLT1B-int LTR MaLR 1635 1733 -2 8 644 1077 238 82 98 chrX 7761821 7762198 -158888098 + MLT1B LTR MaLR 4 374 -16 8 644 245 319 0 0 chrX 7763131 7763203 -158887093 + CT-rich Low_complexity Low_complexity 1 72 0 8 644 198 0 0 0 chrX 7763207 7763229 -158887067 + (TG)n Simple_repeat Simple_repeat 2 23 0 8 644 525 231 0 71 chrX 7763243 7763355 -158886941 - PB1D10 SINE Alu -12 105 2 8 644 690 277 21 33 chrX 7764272 7764480 -158885816 + ID_B1 SINE B4 85 292 0 8 644 300 161 177 0 chrX 7764529 7764591 -158885705 + tRNA-Ala-GCA tRNA tRNA 3 75 0 8 644 585 254 191 23 chrX 7764603 7764858 -158885438 + L1M5 LINE L1 5319 5610 -2175 8 644 1099 91 0 0 chrX 7765172 7765315 -158884981 - B1_Mus1 SINE Alu -5 143 1 8 644 287 273 104 97 chrX 7765375 7765401 -158884895 + MT2B LTR ERVL 143 213 -388 8 644 482 200 0 23 chrX 7765401 7765488 -158884808 + B1_Mus2 SINE Alu 2 86 -61 8 644 287 273 104 97 chrX 7765488 7765509 -158884787 + MT2B LTR ERVL 214 277 -324 8 644 432 55 0 0 chrX 7765519 7765574 -158884722 + (CA)n Simple_repeat Simple_repeat 2 56 0 8 644 589 289 28 7 chrX 7765608 7765751 -158884545 + B3 SINE B2 71 216 0 8 644 1284 20 0 0 chrX 7765776 7765922 -158884374 + B1_Mm SINE Alu 2 147 0 8 644 1353 50 43 22 chrX 7765946 7766131 -158884165 + B2_Mm2 SINE B2 2 190 -5 8 644 1229 49 0 0 chrX 7766154 7766298 -158883998 + B1_Mus2 SINE Alu 1 144 -3 8 644 204 40 0 0 chrX 7766298 7766323 -158883973 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 8 644 500 254 75 17 chrX 7766325 7766445 -158883851 + B3 SINE B2 90 216 0 8 644 1217 89 5 77 chrX 7766452 7766564 -158883732 + B2_Mm2 SINE B2 2 114 -81 8 644 3271 39 23 0 chrX 7766564 7766951 -158883345 + MTA_Mm LTR MaLR 1 396 0 8 644 1217 89 5 77 chrX 7766951 7767045 -158883251 + B2_Mm2 SINE B2 115 193 -2 8 644 623 214 47 54 chrX 7767690 7767838 -158882458 + B1_Mur1 SINE Alu 1 147 -2 8 644 1388 80 16 11 chrX 7767926 7768116 -158882180 + B2_Mm2 SINE B2 1 191 -4 8 644 867 185 32 83 chrX 7768124 7768342 -158881954 + B3 SINE B2 10 216 0 8 644 1181 74 0 0 chrX 7768787 7768935 -158881361 - B1_Mus1 SINE Alu 0 148 1 8 644 338 276 92 0 chrX 7768974 7769061 -158881235 + B1F1 SINE Alu 7 101 -48 8 644 390 194 152 10 chrX 7769066 7769165 -158881131 + PB1D10 SINE Alu 1 113 -4 8 644 181 250 54 0 chrX 7770462 7770518 -158879778 - L3 LINE CR1 -2461 2028 1970 8 644 189 94 0 0 chrX 7770934 7770966 -158879330 + (A)n Simple_repeat Simple_repeat 1 32 0 8 644 978 96 14 22 chrX 7771830 7771968 -158878328 + B1_Mus2 SINE Alu 1 137 -10 8 644 264 289 40 0 chrX 7772093 7772169 -158878127 - ID2 SINE ID -2 81 3 8 644 801 165 67 8 chrX 7772179 7772197 -158878099 - B1_Mur1 SINE Alu -5 144 118 8 644 423 0 0 0 chrX 7772197 7772244 -158878052 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 644 801 165 67 8 chrX 7772244 7772359 -158877937 - B1_Mur1 SINE Alu -32 117 3 8 644 234 279 32 16 chrX 7772385 7772447 -158877849 + PB1D10 SINE Alu 1 63 -54 8 644 925 144 0 0 chrX 7772496 7772642 -158877654 - B1_Mus1 SINE Alu 0 148 3 8 644 273 29 0 0 chrX 7772723 7772757 -158877539 + (CAAAA)n Simple_repeat Simple_repeat 4 37 0 8 644 612 109 8 134 chrX 7772778 7772905 -158877391 - B1_Mur4 SINE Alu -5 145 35 8 644 1500 54 16 0 chrX 7772950 7773135 -158877161 - B2_Mm2 SINE B2 -6 189 2 8 644 1235 131 0 10 chrX 7773212 7773405 -158876891 + B2_Mm2 SINE B2 1 191 -4 8 644 711 194 62 128 chrX 7773417 7773612 -158876684 + B2_Mm2 SINE B2 7 188 -7 8 644 1194 79 0 41 chrX 7773617 7773781 -158876515 + B2_Mm2 SINE B2 1 159 -36 8 644 357 24 0 0 chrX 7773781 7773823 -158876473 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 8 644 567 88 0 48 chrX 7773834 7773918 -158876378 + B1_Mus2 SINE Alu 68 147 0 8 644 399 223 43 35 chrX 7774092 7774208 -158876088 - PB1 SINE Alu -2 125 9 8 644 788 277 44 15 chrX 7774241 7774446 -158875850 + ID_B1 SINE B4 2 212 -12 8 644 299 105 18 0 chrX 7774446 7774503 -158875793 + (TCCTG)n Simple_repeat Simple_repeat 3 60 0 8 644 709 216 138 31 chrX 7774554 7774750 -158875546 + ID_B1 SINE B4 3 219 -5 8 644 383 312 141 55 chrX 7775589 7775995 -158874301 + L2a LINE L2 2938 3426 0 8 644 200 302 0 0 chrX 7776004 7776047 -158874249 + L2b LINE L2 3333 3375 0 8 644 1184 62 7 0 chrX 7777031 7777177 -158873119 + B1_Mus1 SINE Alu 2 148 0 8 644 183 42 0 0 chrX 7777177 7777201 -158873095 + (CAA)n Simple_repeat Simple_repeat 2 25 0 8 644 557 331 164 45 chrX 7777424 7777756 -158872540 + L2a LINE L2 2984 3369 -57 8 644 761 266 17 60 chrX 7777756 7777832 -158872464 - ID_B1 SINE B4 -2 222 158 8 644 1283 99 0 45 chrX 7777832 7778033 -158872263 - B2_Mm2 SINE B2 -1 194 3 8 644 761 266 17 60 chrX 7778033 7778188 -158872108 - ID_B1 SINE B4 -67 157 1 8 644 557 331 164 45 chrX 7778188 7778251 -158872045 + L2a LINE L2 3370 3426 0 8 644 896 169 13 26 chrX 7779313 7779465 -158870831 - B1_Mur4 SINE Alu 0 150 1 8 644 186 103 0 0 chrX 7781517 7781546 -158868750 + (GGGAGA)n Simple_repeat Simple_repeat 4 32 0 8 644 372 329 70 37 chrX 7781803 7782046 -158868250 + L1MC4 LINE L1 7792 8042 0 8 644 183 139 0 0 chrX 7784269 7784305 -158865991 + (A)n Simple_repeat Simple_repeat 1 36 0 8 644 255 226 15 46 chrX 7784738 7784803 -158865493 - ID2 SINE ID -6 77 15 8 644 538 177 99 0 chrX 7784962 7785077 -158865219 + B3 SINE B2 3 131 -62 8 644 732 230 36 0 chrX 7785119 7785258 -158865038 + B1_Mur1 SINE Alu 6 149 0 8 644 269 68 23 0 chrX 7785267 7785311 -158864985 + (GA)n Simple_repeat Simple_repeat 2 46 0 8 644 240 59 0 0 chrX 7785421 7785455 -158864841 + (TG)n Simple_repeat Simple_repeat 2 35 0 9 644 383 256 67 0 chrX 7785516 7785606 -158864690 - PB1D9 SINE Alu -16 104 9 9 644 497 209 123 8 chrX 7785608 7785738 -158864558 - B1_Mur2 SINE Alu -2 147 3 9 644 784 227 14 60 chrX 7785782 7785998 -158864298 - B3 SINE B2 -10 206 1 9 644 223 233 0 0 chrX 7786082 7786125 -158864171 - RSINE1 SINE B4 -118 47 5 9 644 216 67 0 0 chrX 7786148 7786178 -158864118 + (T)n Simple_repeat Simple_repeat 1 30 0 9 644 1165 75 0 0 chrX 7786178 7786324 -158863972 - B1_Mus2 SINE Alu 0 147 2 9 644 492 200 120 0 chrX 7786331 7786431 -158863865 - ID_B1 SINE B4 -4 220 109 9 644 392 223 157 26 chrX 7786332 7786447 -158863849 - B1F SINE Alu -5 144 15 9 644 474 164 85 19 chrX 7786506 7786612 -158863684 - PB1D9 SINE Alu -7 113 1 9 644 602 278 87 91 chrX 7786620 7787080 -158863216 - L1MC4 LINE L1 -411 7631 7174 9 644 808 171 71 0 chrX 7787098 7787238 -158863058 - B1_Mur4 SINE Alu 0 150 1 9 644 334 278 79 87 chrX 7787348 7787401 -158862895 - PB1 SINE Alu -2 125 64 9 644 2229 127 92 225 chrX 7787401 7787580 -158862716 - RMER2 LTR ERV1 0 567 403 9 644 1266 28 0 7 chrX 7787580 7787726 -158862570 - B1_Mm SINE Alu 0 147 3 9 644 2229 127 92 225 chrX 7787726 7788199 -158862097 - RMER2 LTR ERV1 -165 402 2 9 644 334 278 79 87 chrX 7788199 7788271 -158862025 - PB1 SINE Alu -64 63 1 9 644 486 267 29 133 chrX 7788271 7788298 -158861998 + B4 SINE B4 69 77 -215 9 644 986 149 0 7 chrX 7788298 7788447 -158861849 + B1_Mur3 SINE Alu 2 149 0 9 644 484 232 8 51 chrX 7788511 7788629 -158861667 - B3A SINE B2 -50 148 36 9 644 432 236 119 13 chrX 7788643 7788756 -158861540 + B3 SINE B2 17 138 -57 9 644 3411 108 12 22 chrX 7788756 7789256 -158861040 - RLTR19A LTR ERVK -1 495 1 9 644 353 249 95 101 chrX 7789256 7789321 -158860975 + B2_Mm2 SINE B2 139 194 -1 9 644 975 153 0 0 chrX 7789337 7789481 -158860815 + B1_Mur3 SINE Alu 2 145 -4 9 644 290 258 62 0 chrX 7789497 7789594 -158860702 - L1MB3 LINE L1 -102 6081 5979 9 644 504 207 34 8 chrX 7789612 7789729 -158860567 + Lx2B LINE L1 6881 7000 0 9 644 653 250 95 17 chrX 7789729 7789908 -158860388 - B3 SINE B2 -3 195 3 9 644 865 231 132 53 chrX 7789909 7790235 -158860061 - L1MB2 LINE L1 -186 5985 5632 9 644 665 24 0 0 chrX 7790235 7790319 -158859977 + L1Md_T LINE L1 6498 6581 -1 9 644 865 231 132 53 chrX 7790319 7790349 -158859947 - L1MB2 LINE L1 -540 5631 5601 9 644 431 62 16 0 chrX 7790354 7790418 -158859878 - B1_Mus2 SINE Alu 0 147 83 9 644 312 256 0 0 chrX 7790418 7790504 -158859792 + (CATA)n Simple_repeat Simple_repeat 2 87 0 9 644 236 209 229 37 chrX 7790506 7790615 -158859681 + Lx9 LINE L1 6251 6380 -1264 9 644 1286 34 0 0 chrX 7790639 7790787 -158859509 - B1_Mus1 SINE Alu 0 148 1 9 644 269 234 0 0 chrX 7790788 7790852 -158859444 - L1MB2 LINE L1 -565 5606 5543 9 644 349 202 232 11 chrX 7790959 7791054 -158859242 - ID_B1 SINE B4 -6 218 103 9 644 235 266 254 9 chrX 7791054 7791069 -158859227 - B1F SINE Alu -6 143 7 9 644 354 273 81 0 chrX 7791083 7791182 -158859114 - PB1 SINE Alu -8 119 13 9 644 645 175 47 87 chrX 7791215 7791365 -158858931 - B1_Mur3 SINE Alu -1 148 5 9 644 451 260 106 0 chrX 7791371 7791494 -158858802 - B1F2 SINE Alu -11 138 3 9 644 496 185 43 0 chrX 7791569 7791659 -158858637 - B1_Mur1 SINE Alu -8 141 48 9 644 2397 82 3 6 chrX 7791659 7791979 -158858317 + ORR1A2 LTR MaLR 1 319 -8 9 644 309 220 0 0 chrX 7791983 7792033 -158858263 - B1F2 SINE Alu -99 50 1 9 644 342 265 0 0 chrX 7792044 7792127 -158858169 - ID_B1 SINE B4 -3 221 139 9 644 893 189 28 80 chrX 7792299 7792512 -158857784 - B3 SINE B2 0 216 15 9 644 772 46 18 9 chrX 7792512 7792621 -158857675 + (TTTC)n Simple_repeat Simple_repeat 2 111 0 9 644 1098 86 0 0 chrX 7792621 7792760 -158857536 - B1_Mus1 SINE Alu -9 139 1 9 644 1172 120 0 68 chrX 7792765 7792811 -158857485 - B2_Mm2 SINE B2 -3 192 160 9 644 198 0 0 0 chrX 7792811 7792833 -158857463 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 9 644 1218 70 6 0 chrX 7792833 7792991 -158857305 - B2_Mm1a SINE B2 -33 160 2 9 644 497 239 36 15 chrX 7792998 7793184 -158857112 - B3A SINE B2 -5 190 1 9 644 1709 21 0 0 chrX 7793196 7793387 -158856909 - B2_Mm1t SINE B2 -1 192 2 9 644 699 187 127 40 chrX 7793392 7793565 -158856731 - B3A SINE B2 0 198 11 9 644 237 65 0 0 chrX 7793593 7793624 -158856672 + (TTTTC)n Simple_repeat Simple_repeat 4 34 0 9 644 1133 69 14 0 chrX 7793624 7793769 -158856527 - B1_Mus1 SINE Alu 0 148 2 9 644 261 88 0 0 chrX 7793858 7793892 -158856404 + B1_Mus1 SINE Alu 2 35 -113 9 644 276 67 156 0 chrX 7793884 7793929 -158856367 + B1_Mus2 SINE Alu 95 146 -1 9 644 373 261 43 11 chrX 7793959 7794052 -158856244 - PB1 SINE Alu -2 125 30 9 644 300 70 0 0 chrX 7794057 7794100 -158856196 + (TG)n Simple_repeat Simple_repeat 1 43 0 9 644 871 109 0 62 chrX 7794216 7794362 -158855934 + B1_Mus2 SINE Alu 6 142 -5 9 644 445 194 0 61 chrX 7794422 7794521 -158855775 - RSINE1 SINE B4 -61 104 12 9 644 512 255 19 126 chrX 7794920 7795062 -158855234 + MER90a LTR ERV1 153 293 -321 9 644 360 232 12 12 chrX 7795062 7795145 -158855151 - ID4 SINE ID 0 83 1 9 644 512 255 19 126 chrX 7795145 7795217 -158855079 + MER90a LTR ERV1 294 344 -270 9 644 400 239 65 11 chrX 7795330 7795423 -158854873 - B1F1 SINE Alu -49 100 3 9 644 243 250 49 16 chrX 7795430 7795491 -158854805 + PB1 SINE Alu 58 120 -7 9 644 222 225 0 24 chrX 7795500 7795541 -158854755 + B1F2 SINE Alu 7 46 -103 9 644 983 119 88 0 chrX 7795549 7795708 -158854588 + B2_Mm2 SINE B2 22 194 -1 9 644 230 333 34 34 chrX 7796129 7796247 -158854049 + L2c LINE L2 3022 3139 -248 9 644 259 25 50 0 chrX 7796378 7796418 -158853878 + (CCCCCG)n Simple_repeat Simple_repeat 3 44 0 9 644 256 278 130 22 chrX 7796739 7796831 -158853465 - B1F1 SINE Alu 0 149 48 9 644 246 246 27 14 chrX 7797069 7797143 -158853153 + CT-rich Low_complexity Low_complexity 3 77 0 9 644 416 167 63 53 chrX 7797258 7797353 -158852943 + RMER10A LTR ERVL 322 417 -25 9 644 1026 78 21 0 chrX 7797419 7797560 -158852736 - B1_Mus2 SINE Alu 0 147 4 9 644 27 0 0 0 chrX 7797567 7797594 -158852702 + AT_rich Low_complexity Low_complexity 1 27 0 9 644 198 103 0 0 chrX 7797599 7797628 -158852668 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 644 642 224 75 0 chrX 7797636 7797770 -158852526 - RSINE1 SINE B4 -19 146 3 9 644 31 34 0 33 chrX 7797798 7797819 -158852477 + AT_rich Low_complexity Low_complexity 1 21 0 9 644 1385 76 16 5 chrX 7797819 7798005 -158852291 + B2_Mm2 SINE B2 1 188 -7 9 644 1147 68 7 0 chrX 7798005 7798151 -158852145 + B1_Mus1 SINE Alu 1 148 0 9 644 31 34 0 33 chrX 7798151 7798188 -158852108 + AT_rich Low_complexity Low_complexity 1 36 0 9 644 532 254 33 39 chrX 7798196 7798376 -158851920 - B3A SINE B2 -19 179 1 9 644 359 260 19 77 chrX 7798398 7798502 -158851794 - PB1D9 SINE Alu -18 102 5 9 644 543 195 26 17 chrX 7798594 7798709 -158851587 + MTD LTR MaLR 5 120 -299 9 644 804 114 0 21 chrX 7798714 7798857 -158851439 + (TTC)n Simple_repeat Simple_repeat 2 141 0 9 644 405 0 0 0 chrX 7798858 7798903 -158851393 + (TC)n Simple_repeat Simple_repeat 2 46 0 9 644 872 183 0 0 chrX 7798903 7799045 -158851251 - B1_Mus2 SINE Alu -5 142 1 9 644 209 250 0 0 chrX 7799053 7799093 -158851203 + polypyrimidine Low_complexity Low_complexity 4 43 0 9 644 432 175 0 59 chrX 7799094 7799179 -158851117 - B1_Mus2 SINE Alu -65 82 3 9 644 1192 148 210 0 chrX 7799179 7799433 -158850863 + MTD LTR MaLR 102 409 -10 9 644 1178 74 0 0 chrX 7800951 7801099 -158849197 + B1_Mus1 SINE Alu 1 148 0 9 644 203 79 0 26 chrX 7801113 7801152 -158849144 + (CAA)n Simple_repeat Simple_repeat 2 39 0 9 644 265 192 260 27 chrX 7801340 7801490 -158848806 + Lx8 LINE L1 7285 7469 -4 9 644 859 205 83 46 chrX 7801691 7801982 -158848314 + RMER13A LTR ERVK 98 456 -452 9 644 247 198 140 21 chrX 7802021 7802114 -158848182 + RMER13A LTR ERVK 578 681 -227 9 644 289 279 103 68 chrX 7802116 7802262 -158848034 + RMER13B LTR ERVK 623 773 -135 9 644 596 235 42 0 chrX 7802418 7802537 -158847759 + RSINE1 SINE B4 9 132 -33 9 644 1267 34 0 0 chrX 7802598 7802745 -158847551 + B1_Mm SINE Alu 1 147 0 9 644 630 0 0 0 chrX 7802870 7802940 -158847356 + (TA)n Simple_repeat Simple_repeat 2 71 0 9 644 1219 28 14 7 chrX 7803003 7803149 -158847147 + B1_Mm SINE Alu 1 147 0 9 644 247 49 341 0 chrX 7803194 7803235 -158847061 - B2_Mm2 SINE B2 -94 101 47 9 644 1376 62 23 0 chrX 7803279 7803456 -158846840 - B2_Mm2 SINE B2 -14 181 1 9 644 1097 121 92 0 chrX 7803546 7803719 -158846577 - B2_Mm1t SINE B2 -4 189 1 9 644 186 193 0 0 chrX 7805420 7805477 -158844819 + CT-rich Low_complexity Low_complexity 1 57 0 9 644 2293 118 64 21 chrX 7806223 7806569 -158843727 - ORR1B1 LTR MaLR 0 394 34 9 644 477 0 0 0 chrX 7806569 7806622 -158843674 + (CA)n Simple_repeat Simple_repeat 1 53 0 9 644 2293 118 64 21 chrX 7806622 7806649 -158843647 - ORR1B1 LTR MaLR -361 33 6 9 644 213 333 75 15 chrX 7806860 7806994 -158843302 + L2 LINE L2 2766 2907 -512 9 644 737 184 80 17 chrX 7807054 7807299 -158842997 + ORR1B2-int LTR MaLR 2 328 -1042 9 644 559 257 27 19 chrX 7807293 7807537 -158842759 + ORR1B2-int LTR MaLR 522 884 -625 9 644 1376 210 28 57 chrX 7807527 7807845 -158842451 + ORR1B2 LTR MaLR 32 340 -27 9 644 201 125 19 77 chrX 7807870 7807922 -158842374 + C-rich Low_complexity Low_complexity 1 49 0 1 644 216 0 0 0 chrX 7807949 7807973 -158842323 + (A)n Simple_repeat Simple_repeat 1 24 0 1 644 1465 75 16 0 chrX 7807987 7808175 -158842121 + B2_Mm2 SINE B2 2 192 -3 1 644 328 129 0 6 chrX 7808175 7808228 -158842068 + ORR1B2 LTR MaLR 316 374 -4 9 644 270 186 81 54 chrX 7808237 7808311 -158841985 - MLT1B LTR MaLR -68 322 247 1 644 1419 72 16 6 chrX 7808314 7808496 -158841800 + B2_Mm2 SINE B2 3 186 -9 1 644 1122 81 0 7 chrX 7808670 7808819 -158841477 - B1_Mus1 SINE Alu 0 148 1 1 644 510 271 66 7 chrX 7808892 7809044 -158841252 + MER2 DNA MER2_type 22 182 -163 1 644 767 218 216 9 chrX 7809351 7809564 -158840732 + Lx9 LINE L1 6404 6660 -984 1 644 508 147 77 19 chrX 7809610 7809714 -158840582 - B1_Mur2 SINE Alu 0 149 40 1 644 1092 36 14 21 chrX 7809752 7809894 -158840402 + B1_Mm SINE Alu 1 141 -6 1 644 300 53 0 0 chrX 7809896 7809934 -158840362 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1 644 306 239 53 64 chrX 7809934 7810028 -158840268 + PB1D9 SINE Alu 2 94 -53 1 644 989 234 112 68 chrX 7810028 7810437 -158839859 - Lx7 LINE L1 -444 7252 6826 1 644 672 266 87 39 chrX 7810438 7810747 -158839549 + Lx7 LINE L1 5808 6131 -1565 1 644 654 79 0 0 chrX 7810749 7810838 -158839458 + B1_Mus1 SINE Alu 2 90 -58 1 644 306 284 100 50 chrX 7810917 7811017 -158839279 + B1_Mur1 SINE Alu 2 106 -43 1 644 299 166 2 0 chrX 7811035 7811093 -158839203 - B1_Mus2 SINE Alu -2 147 89 1 644 383 173 26 111 chrX 7811098 7811215 -158839081 + B1_Mus2 SINE Alu 41 147 0 1 644 1189 41 7 0 chrX 7811219 7811364 -158838932 + B1_Mus2 SINE Alu 1 146 -1 1 644 198 0 0 0 chrX 7811364 7811386 -158838910 + (CAAA)n Simple_repeat Simple_repeat 1 22 0 1 644 1129 292 20 72 chrX 7811409 7811689 -158838607 + Lx7 LINE L1 6108 6370 -1326 1 644 2878 18 8 75 chrX 7811689 7812060 -158838236 - ORR1A0 LTR MaLR 0 346 1 1 644 1129 292 20 72 chrX 7812060 7812226 -158838070 + Lx7 LINE L1 6371 6531 -1165 1 644 453 209 22 11 chrX 7812246 7812338 -158837958 - B1_Mur4 SINE Alu -57 93 1 1 644 873 131 15 0 chrX 7812342 7812472 -158837824 - B1_Mur4 SINE Alu 0 150 19 1 644 228 67 0 0 chrX 7812474 7812504 -158837792 + (CCA)n Simple_repeat Simple_repeat 1 30 0 1 644 579 237 67 0 chrX 7812533 7812668 -158837628 + B1_Mus1 SINE Alu 2 145 -3 1 644 1218 42 7 0 chrX 7812668 7812812 -158837484 + B1_Mm SINE Alu 3 147 0 1 644 824 271 13 87 chrX 7813019 7813227 -158837069 + B3A SINE B2 1 195 -21 1 644 1705 16 0 0 chrX 7813227 7813415 -158836881 + B2_Mm1a SINE B2 1 188 -5 1 644 688 271 13 87 chrX 7813415 7813436 -158836860 + B3 SINE B2 196 213 -3 1 644 480 277 83 8 chrX 7813450 7813537 -158836759 - B3A SINE B2 -66 132 38 1 644 198 0 0 0 chrX 7813537 7813559 -158836737 + (CAG)n Simple_repeat Simple_repeat 2 23 0 1 644 480 277 83 8 chrX 7813559 7813591 -158836705 - B3A SINE B2 -161 37 4 1 644 339 279 66 19 chrX 7813650 7813756 -158836540 - PB1D10 SINE Alu 0 117 7 1 644 662 270 36 12 chrX 7813675 7813840 -158836456 - ID_B1 SINE B4 -54 170 2 1 644 235 321 0 0 chrX 7813936 7813989 -158836307 - PB1 SINE Alu -72 55 3 1 644 195 184 224 60 chrX 7814033 7814149 -158836147 + L2a LINE L2 2780 2914 -505 1 644 1243 84 6 0 chrX 7814503 7814669 -158835627 + B2_Mm1t SINE B2 1 167 -26 1 644 406 77 20 2 chrX 7814686 7814788 -158835508 + B2_Mm2 SINE B2 47 186 -9 1 644 848 137 30 1 chrX 7814867 7815010 -158835286 + B1_Mur4 SINE Alu 3 149 -1 1 644 743 199 50 0 chrX 7815051 7815192 -158835104 - B1_Mur4 SINE Alu 0 150 3 1 644 296 300 107 16 chrX 7815193 7815315 -158834981 - L1M2 LINE L1 -887 5256 5124 1 644 712 269 57 11 chrX 7815325 7815502 -158834794 - B3 SINE B2 -5 211 27 1 644 34 0 0 0 chrX 7815502 7815536 -158834760 + AT_rich Low_complexity Low_complexity 1 34 0 1 644 1655 31 0 0 chrX 7815536 7815727 -158834569 - B2_Mm1a SINE B2 -2 191 1 1 644 212 277 140 57 chrX 7815817 7815974 -158834322 + L2a LINE L2 2918 3087 -339 1 644 216 122 0 0 chrX 7816583 7816624 -158833672 + (T)n Simple_repeat Simple_repeat 1 41 0 1 644 1085 44 81 0 chrX 7816624 7816760 -158833536 - B1_Mus2 SINE Alu 0 147 1 1 644 498 174 0 0 chrX 7816761 7816847 -158833449 + ID_B1 SINE B4 138 223 -1 1 644 195 42 0 0 chrX 7816923 7816947 -158833349 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 644 335 319 43 0 chrX 7816947 7817041 -158833255 - PB1 SINE Alu -10 117 20 1 644 326 281 8 116 chrX 7817025 7817154 -158833142 - ID_B1 SINE B4 -108 116 2 1 644 245 284 176 116 chrX 7817212 7817275 -158833021 - Charlie4a DNA MER1_type -116 392 350 1 644 415 264 27 9 chrX 7817275 7817386 -158832910 + PB1D10 SINE Alu 1 113 -4 1 644 245 284 176 116 chrX 7817386 7817641 -158832655 - Charlie4a DNA MER1_type -159 349 55 1 644 1365 75 37 5 chrX 7818113 7818300 -158831996 + B2_Mm2 SINE B2 2 194 -1 1 644 354 300 48 40 chrX 7818359 7818484 -158831812 - RSINE1 SINE B4 -29 136 11 1 644 316 239 258 11 chrX 7818549 7818642 -158831654 - PB1D10 SINE Alu 0 117 2 1 644 997 252 5 19 chrX 7818670 7818884 -158831412 - B3 SINE B2 0 216 6 1 644 312 121 59 29 chrX 7818912 7818980 -158831316 - B3 SINE B2 -1 215 146 1 644 779 159 24 0 chrX 7819001 7819127 -158831169 - B1_Mur2 SINE Alu -18 131 3 1 644 1426 79 11 5 chrX 7819150 7819341 -158830955 - B2_Mm2 SINE B2 -2 193 2 1 644 1239 48 0 0 chrX 7819615 7819762 -158830534 + B1_Mus1 SINE Alu 2 148 0 1 644 431 170 98 20 chrX 7819785 7819887 -158830409 - B1_Mur2 SINE Alu 0 149 40 1 644 180 299 104 0 chrX 7820160 7820227 -158830069 + L2a LINE L2 3343 3416 -10 1 644 207 0 0 0 chrX 7820298 7820321 -158829975 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 644 872 191 0 0 chrX 7820349 7820490 -158829806 + B3 SINE B2 1 141 -75 1 644 604 231 163 64 chrX 7820504 7820603 -158829693 - ID_B1 SINE B4 0 224 136 1 644 1671 210 21 47 chrX 7820603 7820987 -158829309 + ORR1D1 LTR MaLR 1 374 0 1 644 604 231 163 64 chrX 7820987 7821090 -158829206 - ID_B1 SINE B4 -89 135 2 1 644 542 189 171 8 chrX 7821215 7821338 -158828958 + B1_Mur4 SINE Alu 3 145 -5 1 644 706 273 62 5 chrX 7821364 7821574 -158828722 - ID_B1 SINE B4 -1 223 2 1 644 409 278 38 105 chrX 7821588 7821600 -158828696 - B2_Mm2 SINE B2 0 195 184 1 644 1078 30 65 12 chrX 7821600 7821769 -158828527 + (TTTCC)n Simple_repeat Simple_repeat 3 180 0 1 644 655 203 31 15 chrX 7821774 7821904 -158828392 - B1_Mur1 SINE Alu -13 136 5 1 644 663 268 60 27 chrX 7821904 7821927 -158828369 - B3A SINE B2 -2 196 160 1 644 191 36 36 0 chrX 7821927 7821955 -158828341 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 644 663 266 65 11 chrX 7821955 7822121 -158828175 - B3A SINE B2 -23 175 1 1 644 1106 62 7 0 chrX 7823240 7823384 -158826912 + MTA_Mm LTR MaLR 200 344 -52 1 644 359 315 140 64 chrX 7824254 7824647 -158825649 + L2 LINE L2 2382 2804 -615 1 644 1370 61 39 16 chrX 7824895 7825077 -158825219 + B2_Mm2 SINE B2 2 187 -8 1 644 600 268 30 64 chrX 7825101 7825304 -158824992 - B3A SINE B2 -2 196 1 1 644 375 208 14 14 chrX 7825325 7825398 -158824898 - B1F SINE Alu -67 82 10 1 644 1453 69 16 5 chrX 7825407 7825596 -158824700 - B2_Mm2 SINE B2 -3 192 2 1 644 237 33 0 0 chrX 7825728 7825758 -158824538 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 644 220 306 93 40 chrX 7825846 7825921 -158824375 + ID4_ SINE ID 2 80 -3 1 644 255 304 37 25 chrX 7826410 7826491 -158823805 - ID4 SINE ID -1 82 1 1 644 238 270 86 91 chrX 7826491 7826657 -158823639 - YREP_Mm Unknown Unknown -1467 345 181 1 644 1071 8 16 0 chrX 7826532 7826660 -158823636 + B1_Mus2 SINE Alu 17 146 -1 1 644 591 244 24 42 chrX 7826706 7826873 -158823423 + RSINE1 SINE B4 2 165 0 1 644 1100 205 5 23 chrX 7826939 7827159 -158823137 - B3 SINE B2 0 216 1 1 644 214 258 129 0 chrX 7827196 7827258 -158823038 - RSINE1 SINE B4 -2 163 94 1 644 230 273 124 10 chrX 7829996 7830109 -158820187 + MIRb SINE MIR 57 183 -85 1 644 605 188 50 43 chrX 7830228 7830367 -158819929 + RSINE1 SINE B4 9 148 -17 1 644 408 181 0 0 chrX 7830377 7830460 -158819836 + (TAAA)n Simple_repeat Simple_repeat 2 84 0 1 644 1007 123 0 6 chrX 7830478 7830642 -158819654 + (TTTC)n Simple_repeat Simple_repeat 2 164 0 1 644 1248 54 0 0 chrX 7830654 7830801 -158819495 - B1_Mus1 SINE Alu 0 148 2 1 644 850 261 108 29 chrX 7831016 7831331 -158818965 - MER63B DNA AcHobo 0 436 97 1 644 741 176 0 60 chrX 7831453 7831586 -158818710 - B1_Mur2 SINE Alu 0 149 25 1 644 228 301 37 110 chrX 7831556 7831610 -158818686 - MER63B DNA AcHobo -284 152 112 1 644 694 277 39 10 chrX 7831610 7831814 -158818482 - B3 SINE B2 -5 211 2 1 644 228 301 37 110 chrX 7831814 7831923 -158818373 - MER63B DNA AcHobo -325 111 1 1 644 1079 62 151 24 chrX 7831945 7832111 -158818185 + B2_Mm2 SINE B2 1 187 -8 1 644 537 221 24 8 chrX 7832124 7832247 -158818049 - B3 SINE B2 0 216 92 1 644 1638 21 27 0 chrX 7832397 7832585 -158817711 + B2_Mm1a SINE B2 1 193 0 1 644 421 243 17 35 chrX 7832588 7832703 -158817593 - PB1D10 SINE Alu -3 114 2 1 644 353 268 0 11 chrX 7832787 7832874 -158817422 - PB1 SINE Alu -7 120 35 1 644 240 176 0 0 chrX 7833018 7833086 -158817210 + G-rich Low_complexity Low_complexity 1 68 0 1 644 22 0 0 0 chrX 7833281 7833303 -158816993 + AT_rich Low_complexity Low_complexity 1 22 0 1 644 564 185 121 0 chrX 7833303 7833431 -158816865 + B1F2 SINE Alu 1 144 -5 1 644 416 296 56 91 chrX 7833435 7833721 -158816575 - B4 SINE B4 0 292 17 1 644 315 0 0 0 chrX 7833803 7833838 -158816458 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 644 1314 41 69 29 chrX 7833861 7834035 -158816261 + B2_Mm2 SINE B2 1 181 -14 1 644 203 98 24 0 chrX 7834052 7834078 -158816218 + (TTTTTG)n Simple_repeat Simple_repeat 6 32 0 1 644 1185 34 7 33 chrX 7834078 7834229 -158816067 - B1_Mm SINE Alu 0 147 1 1 644 203 98 24 0 chrX 7834229 7834243 -158816053 + (TTTTTG)n Simple_repeat Simple_repeat 4 17 0 1 644 216 260 34 135 chrX 7834327 7834366 -158815930 + ID4 SINE ID 4 38 -45 1 644 369 0 0 0 chrX 7834366 7834407 -158815889 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 644 216 260 34 135 chrX 7834407 7834456 -158815840 + ID4 SINE ID 39 83 0 1 644 357 43 0 0 chrX 7835830 7835877 -158814419 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 1 644 521 129 0 11 chrX 7836324 7836418 -158813878 + (TAA)n Simple_repeat Simple_repeat 2 94 0 1 644 492 48 0 0 chrX 7838851 7838914 -158811382 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 644 31 0 0 0 chrX 7840861 7840892 -158809404 + AT_rich Low_complexity Low_complexity 1 31 0 1 644 201 121 0 0 chrX 7841193 7841226 -158809070 + (TGG)n Simple_repeat Simple_repeat 3 35 0 1 644 415 245 84 9 chrX 7841243 7841350 -158808946 - RSINE1 SINE B4 -37 128 14 1 644 198 0 0 0 chrX 7841380 7841402 -158808894 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 644 561 297 25 43 chrX 7841839 7842001 -158808295 + B3A SINE B2 2 160 -38 1 644 300 211 62 50 chrX 7842003 7842083 -158808213 - HAL1-3A_ME LINE L1 -842 2016 1936 1 644 915 195 47 28 chrX 7842099 7842310 -158807986 + B3 SINE B2 2 216 0 1 644 202 236 0 18 chrX 7842324 7842380 -158807916 + (TATATG)n Simple_repeat Simple_repeat 5 59 0 1 644 687 239 18 25 chrX 7842518 7842681 -158807615 - B3 SINE B2 -7 209 48 1 644 1029 134 58 12 chrX 7842792 7842965 -158807331 - B2_Mm2 SINE B2 -14 181 1 1 644 805 168 101 6 chrX 7842986 7843154 -158807142 - B2_Mm2 SINE B2 -11 184 1 1 644 22 0 0 0 chrX 7843161 7843183 -158807113 + AT_rich Low_complexity Low_complexity 1 22 0 1 644 1030 210 9 23 chrX 7843374 7843589 -158806707 + B3 SINE B2 5 216 0 1 644 1274 40 0 0 chrX 7843614 7843762 -158806534 + B1_Mus1 SINE Alu 1 148 0 1 644 23 33 0 0 chrX 7844224 7844254 -158806042 + AT_rich Low_complexity Low_complexity 1 30 0 1 644 914 255 57 4 chrX 7844296 7844575 -158805721 + L1_Mur1 LINE L1 4320 4613 -1273 1 644 357 188 0 15 chrX 7844569 7844634 -158805662 + L1_Rod LINE L1 4635 4698 -1149 1 644 1734 226 14 68 chrX 7844634 7844751 -158805545 + MTD LTR MaLR 1 108 -311 1 644 1273 101 31 26 chrX 7844751 7844945 -158805351 - B2_Mm2 SINE B2 0 195 1 1 644 1734 214 17 65 chrX 7844945 7845263 -158805033 + MTD LTR MaLR 109 405 -14 1 644 2286 200 18 33 chrX 7845269 7845813 -158804483 + L1_Rod LINE L1 4695 5230 -617 1 644 619 191 17 9 chrX 7845860 7845976 -158804320 + B1_Mur1 SINE Alu 1 117 -32 1 644 798 128 45 13 chrX 7845984 7846156 -158804140 + L1_Rod LINE L1 5274 5450 -430 1 644 488 214 0 43 chrX 7846164 7846325 -158803971 + (CATA)n Simple_repeat Simple_repeat 1 154 0 1 644 3385 272 71 60 chrX 7846326 7846465 -158803831 + Lx9 LINE L1 6251 6381 -1263 1 644 1198 68 0 0 chrX 7846465 7846612 -158803684 - B1_Mus2 SINE Alu 0 147 1 1 644 3385 272 71 60 chrX 7846612 7847519 -158802777 + Lx9 LINE L1 6382 7292 -352 1 644 324 0 0 0 chrX 7847519 7847555 -158802741 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 644 3385 272 71 60 chrX 7847555 7847839 -158802457 + Lx9 LINE L1 7293 7596 -48 1 644 663 37 0 0 chrX 7848745 7848827 -158801469 + (TC)n Simple_repeat Simple_repeat 2 83 0 1 644 297 0 0 0 chrX 7851739 7851772 -158798524 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1 644 1186 42 14 0 chrX 7851772 7851916 -158798380 - B1_Mus1 SINE Alu -2 146 1 1 644 847 139 72 7 chrX 7852113 7852251 -158798045 - B1_Mur2 SINE Alu -2 147 1 1 644 352 202 147 11 chrX 7852262 7852357 -158797939 - PB1D7 SINE Alu -7 113 6 1 644 629 260 187 0 chrX 7852842 7853077 -158797219 - B4A SINE B4 -12 280 2 1 644 441 269 96 15 chrX 7853092 7853228 -158797068 - B3 SINE B2 -4 212 66 1 644 270 289 26 0 chrX 7853414 7853490 -158796806 - ID4 SINE ID -3 80 3 1 644 763 226 167 0 chrX 7855459 7855645 -158794651 + ID_B1 SINE B4 1 217 -7 1 644 340 272 9 28 chrX 7857591 7857697 -158792599 + MER58B DNA MER1_type 26 129 -212 1 644 414 312 110 7 chrX 7857701 7857846 -158792450 + RSINE1 SINE B4 4 163 -2 1 644 426 325 77 5 chrX 7857949 7858156 -158792140 + MER58B DNA MER1_type 105 326 -15 1 644 738 212 0 42 chrX 7858206 7858349 -158791947 - B1_Mur1 SINE Alu -9 140 4 1 644 778 211 22 0 chrX 7858374 7858546 -158791750 - B3 SINE B2 -10 188 1 1 644 263 305 0 12 chrX 7858566 7858658 -158791638 - L2b LINE L2 -342 3084 2991 1 644 226 342 40 0 chrX 7858848 7858924 -158791372 - ID2 SINE ID -4 79 1 1 644 753 251 186 54 chrX 7858977 7859310 -158790986 + MTEa LTR MaLR 1 377 -2 1 644 305 279 36 48 chrX 7859619 7859785 -158790511 + RMER15 LTR ERVL 407 570 -5 1 644 1036 47 264 0 chrX 7859810 7859958 -158790338 + B2_Mm2 SINE B2 2 188 -7 1 644 1714 21 0 0 chrX 7859964 7860154 -158790142 + B2_Mm1a SINE B2 1 190 -3 1 644 203 268 0 0 chrX 7860233 7860274 -158790022 + polypyrimidine Low_complexity Low_complexity 1 41 0 1 644 446 266 17 34 chrX 7860274 7860391 -158789905 - B1F1 SINE Alu 0 117 3 1 644 380 240 86 23 chrX 7860407 7860535 -158789761 - ID_B1 SINE B4 -1 223 88 1 644 292 289 30 29 chrX 7860855 7860993 -158789303 + B1F1 SINE Alu 1 142 -7 1 644 411 225 0 0 chrX 7861117 7861197 -158789099 - ID SINE ID -143 81 2 1 644 552 308 97 46 chrX 7861296 7861555 -158788741 + MLT1D LTR MaLR 2 273 -232 1 644 1192 68 0 0 chrX 7861557 7861705 -158788591 + B1_Mus1 SINE Alu 1 148 0 1 644 204 149 58 0 chrX 7861714 7861801 -158788495 + (CAAA)n Simple_repeat Simple_repeat 1 92 0 1 644 326 298 17 50 chrX 7861844 7861964 -158788332 + PB1D10 SINE Alu 2 117 0 1 644 380 162 26 26 chrX 7862169 7862245 -158788051 + ID4 SINE ID 5 80 -3 1 644 274 253 120 0 chrX 7862247 7862322 -158787974 + ID_B1 SINE B4 121 204 -20 1 644 261 0 0 0 chrX 7862327 7862356 -158787940 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 644 1188 108 0 75 chrX 7862367 7862568 -158787728 + B2_Mm2 SINE B2 1 186 -9 1 644 882 184 111 26 chrX 7862659 7862849 -158787447 + B3 SINE B2 1 206 -10 1 644 929 223 24 0 chrX 7863060 7863266 -158787030 + B3 SINE B2 1 211 -5 1 644 298 268 0 0 chrX 7863370 7863441 -158786855 + PB1 SINE Alu 41 111 -16 1 644 485 325 43 21 chrX 7863495 7863728 -158786568 + MIR SINE MIR 24 261 -1 1 644 560 185 64 36 chrX 7863766 7863906 -158786390 + B1F SINE Alu 1 144 -5 1 644 228 273 91 0 chrX 7864046 7864112 -158786184 - ID4_ SINE ID -10 73 2 1 80 1632 37 5 0 chrX 7864162 7864353 -158785943 - B2_Mm1t SINE B2 0 193 2 1 645 854 164 0 0 chrX 7864956 7865102 -158785194 + RLTR11B LTR ERVK 10 155 -298 1 645 451 273 129 80 chrX 7865118 7865273 -158785023 + MYSERV16_I-int LTR ERVK 138 309 -2017 1 645 1918 22 26 4 chrX 7865273 7865501 -158784795 + L1Md_F3 LINE L1 6339 6571 -13 1 645 451 273 129 80 chrX 7865501 7865538 -158784758 + MYSERV16_I-int LTR ERVK 310 335 -1991 1 645 1296 20 0 0 chrX 7865538 7865685 -158784611 - B1_Mus1 SINE Alu 0 148 2 1 645 451 273 129 80 chrX 7865685 7865778 -158784518 + MYSERV16_I-int LTR ERVK 336 436 -1890 1 645 1982 83 32 9 chrX 7865794 7866109 -158784187 - ORR1A4-int LTR MaLR -1641 322 1 1 645 1578 162 11 142 chrX 7866112 7866199 -158784097 - ORR1A4 LTR MaLR 0 329 288 1 645 1062 93 29 0 chrX 7866199 7866339 -158783957 - B1_Mus1 SINE Alu 0 148 5 1 645 1578 162 11 142 chrX 7866339 7866468 -158783828 - ORR1A4 LTR MaLR -42 287 162 1 645 1364 80 5 16 chrX 7866468 7866658 -158783638 - B2_Mm2 SINE B2 -7 188 1 1 645 1578 162 11 142 chrX 7866658 7866814 -158783482 - ORR1A4 LTR MaLR -168 161 5 1 645 2375 180 25 44 chrX 7866826 7867344 -158782952 + MYSERV-int LTR ERVK 6043 6550 0 1 645 2882 115 0 68 chrX 7867344 7867830 -158782466 + RLTR11B LTR ERVK 1 453 0 1 645 349 289 82 0 chrX 7867939 7868036 -158782260 + PB1D10 SINE Alu 1 105 -12 1 645 376 266 25 42 chrX 7868588 7868706 -158781590 + PB1D10 SINE Alu 1 116 -1 1 645 300 232 136 34 chrX 7868855 7868980 -158781316 + L1MA4A LINE L1 5734 5938 -365 1 645 689 203 65 0 chrX 7868980 7869118 -158781178 - B1F2 SINE Alu -2 147 1 1 645 320 270 0 0 chrX 7869169 7869280 -158781016 - Lx9 LINE L1 -7 7637 7527 1 645 469 242 62 8 chrX 7869314 7869443 -158780853 + ID_B1 SINE B4 82 217 -7 1 645 337 179 71 40 chrX 7869419 7869518 -158780778 + RLTR25B LTR ERVK 408 509 -519 1 645 809 28 0 27 chrX 7869454 7869564 -158780732 + B1_Mm SINE Alu 41 147 0 1 645 590 113 10 0 chrX 7869681 7869778 -158780518 + (TCTA)n Simple_repeat Simple_repeat 2 99 0 1 645 585 224 52 0 chrX 7869939 7870073 -158780223 + B1_Mm SINE Alu 2 142 -5 1 645 234 0 0 0 chrX 7870488 7870514 -158779782 + (CTAA)n Simple_repeat Simple_repeat 4 29 0 1 645 1230 41 7 0 chrX 7870605 7870751 -158779545 + B1_Mus1 SINE Alu 2 148 0 1 645 257 0 30 0 chrX 7870759 7870792 -158779504 + (CAAAC)n Simple_repeat Simple_repeat 2 35 0 1 645 1668 109 31 0 chrX 7870932 7871189 -158779107 + ORR1A2 LTR MaLR 1 265 -62 1 645 1494 210 65 19 chrX 7871194 7871519 -158778777 + Lx5 LINE L1 6694 7033 -17 1 645 426 319 38 6 chrX 7871638 7871796 -158778500 + B4A SINE B4 1 163 -129 1 645 360 283 109 8 chrX 7871915 7872043 -158778253 - B1_Mur1 SINE Alu 0 149 9 1 645 563 109 42 81 chrX 7872112 7872423 -158777873 + (TA)n Simple_repeat Simple_repeat 1 298 0 1 645 227 300 0 0 chrX 7872436 7872486 -158777810 - ID4 SINE ID -10 73 24 1 645 581 230 48 0 chrX 7872652 7872778 -158777518 + RSINE1 SINE B4 3 134 -31 1 645 394 236 58 8 chrX 7872792 7872933 -158777363 + B1F SINE Alu 1 148 -1 1 645 250 255 70 78 chrX 7873345 7873460 -158776836 - Lx9 LINE L1 -1669 5975 5862 1 645 269 179 0 13 chrX 7873606 7873685 -158776611 - Lx9 LINE L1 -109 7535 7458 1 645 368 185 0 0 chrX 7873658 7873739 -158776557 - Lx9 LINE L1 -128 7516 7436 1 645 1024 225 18 109 chrX 7873736 7874010 -158776286 + Lx9 LINE L1 7179 7427 -217 1 645 324 214 111 67 chrX 7874049 7874063 -158776233 - B1F2 SINE Alu -7 142 134 1 645 2388 92 3 52 chrX 7874063 7874407 -158775889 - ORR1A2 LTR MaLR 0 327 1 1 645 324 214 111 67 chrX 7874407 7874482 -158775814 - B1F2 SINE Alu -16 133 49 1 645 511 291 6 44 chrX 7874533 7874691 -158775605 - B3A SINE B2 -5 193 42 1 645 587 45 0 11 chrX 7874954 7875044 -158775252 + L1_Mus3 LINE L1 6546 6634 -4 1 645 231 122 24 0 chrX 7875100 7875141 -158775155 + URR1B DNA MER1_type 1 42 -183 1 645 1393 157 50 65 chrX 7875142 7875574 -158774722 + RMER17C LTR ERVK 16 439 -519 1 645 537 58 0 0 chrX 7875580 7875649 -158774647 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 1 645 1170 57 0 0 chrX 7875652 7875793 -158774503 - B1_Mus1 SINE Alu -5 143 3 1 645 1237 109 17 0 chrX 7875799 7875974 -158774322 - B2_Mm1t SINE B2 -15 178 1 1 645 316 224 0 43 chrX 7876000 7876070 -158774226 + URR1B DNA MER1_type 34 100 -125 1 645 337 316 71 17 chrX 7877441 7877621 -158772675 + Lx8 LINE L1 5630 5799 -492 1 645 224 242 50 0 chrX 7877695 7877794 -158772502 + (TA)n Simple_repeat Simple_repeat 2 105 0 1 645 962 223 155 82 chrX 7877812 7878076 -158772220 - MTD LTR MaLR -14 405 121 1 645 180 111 0 0 chrX 7878076 7878103 -158772193 + (ATG)n Simple_repeat Simple_repeat 2 28 0 1 645 962 223 155 82 chrX 7878103 7878205 -158772091 - MTD LTR MaLR -299 120 12 1 645 820 197 78 65 chrX 7878225 7878380 -158771916 - MTD-int LTR MaLR 0 1258 1106 1 645 1202 72 114 0 chrX 7878380 7878547 -158771749 + B2_Mm2 SINE B2 2 187 -8 1 645 820 197 78 65 chrX 7878547 7878712 -158771584 - MTD-int LTR MaLR -153 1105 934 1 645 1945 68 0 0 chrX 7878719 7878967 -158771329 - Lx LINE L1 -702 5952 5705 1 645 4779 64 3 8 chrX 7878967 7879578 -158770718 - L1Md_F2 LINE L1 -12 6570 5963 1 645 8146 45 0 1 chrX 7879581 7881009 -158769287 - L1Md_F2 LINE L1 -12 6570 5144 1 645 6318 111 22 48 chrX 7881007 7881798 -158768498 - Lx LINE L1 -167 5716 4927 1 645 1119 89 7 0 chrX 7881798 7881944 -158768352 + B1_Mus1 SINE Alu 2 148 0 1 645 6318 111 22 48 chrX 7881944 7882024 -158768272 - Lx LINE L1 -957 4926 4865 1 645 4317 53 0 29 chrX 7882024 7882582 -158767714 + L1Md_F2 LINE L1 6041 6582 0 1 645 6318 111 22 48 chrX 7882582 7882723 -158767573 - Lx LINE L1 -1019 4864 4732 1 645 4520 105 15 28 chrX 7882723 7883218 -158767078 + Lx LINE L1 5973 6468 -186 1 645 3503 25 2 0 chrX 7883218 7883613 -158766683 - MTA_Mm LTR MaLR 0 396 1 1 645 4520 105 15 28 chrX 7883613 7883803 -158766493 + Lx LINE L1 6469 6649 -5 1 645 460 263 150 93 chrX 7883814 7884061 -158766235 - MTD-int LTR MaLR -352 906 646 1 645 22 0 0 0 chrX 7884062 7884084 -158766212 + AT_rich Low_complexity Low_complexity 1 22 0 1 645 1430 110 14 5 chrX 7884085 7884304 -158765992 - Lx2 LINE L1 -2 6995 6775 1 645 7716 104 3 1 chrX 7884302 7885358 -158764938 - Lx2 LINE L1 -352 6645 5588 1 645 238 303 0 0 chrX 7885371 7885437 -158764859 - MTD-int LTR MaLR -622 636 571 1 645 527 260 37 30 chrX 7885438 7885573 -158764723 - MTD LTR MaLR -195 224 89 1 645 243 0 0 0 chrX 7885669 7885696 -158764600 + (CATA)n Simple_repeat Simple_repeat 1 27 0 1 645 2588 144 59 4 chrX 7885714 7886203 -158764093 + RLTR28 LTR ERVL 6 521 -3 1 645 1026 306 15 100 chrX 7886239 7886827 -158763469 + RLTR18 LTR ERVK 28 543 -73 1 645 234 91 0 0 chrX 7886827 7886860 -158763436 + (CATA)n Simple_repeat Simple_repeat 1 33 0 1 645 784 295 0 97 chrX 7886860 7886935 -158763361 + RLTR18 LTR ERVK 440 508 -4 1 645 347 171 105 0 chrX 7886944 7887096 -158763200 + (TA)n Simple_repeat Simple_repeat 2 169 0 1 645 244 305 0 0 chrX 7887345 7887404 -158762892 + RSINE1 SINE B4 84 142 -23 1 645 519 258 29 109 chrX 7887594 7887833 -158762463 + ID_B1 SINE B4 5 224 0 1 645 3881 64 51 2 chrX 7887859 7888373 -158761923 + L1_Mus3 LINE L1 6096 6634 -4 1 645 220 27 54 0 chrX 7888396 7888433 -158761863 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 1 645 341 298 60 17 chrX 7888450 7888566 -158761730 + B3 SINE B2 48 168 -48 1 645 341 157 95 12 chrX 7889013 7889097 -158761199 - RLTR11A2 LTR ERVK -93 434 344 1 645 2313 100 19 0 chrX 7889097 7889418 -158760878 + ORR1A2 LTR MaLR 1 327 0 1 645 2906 157 15 28 chrX 7889421 7890066 -158760230 + ORR1A2-int LTR MaLR 4 646 -1146 1 645 333 258 82 0 chrX 7889983 7890080 -158760216 + MT2B LTR ERVL 161 265 -336 1 645 1569 99 9 0 chrX 7890104 7890337 -158759959 + ORR1A2 LTR MaLR 93 327 0 1 645 765 307 21 61 chrX 7890337 7890696 -158759600 - RLTR11A2 LTR ERVK -183 344 1 1 645 1453 206 49 103 chrX 7890823 7891213 -158759083 - ORR1C1 LTR MaLR -7 371 3 1 645 1672 168 130 20 chrX 7892440 7892617 -158757679 - ORR1C2 LTR MaLR 0 384 175 1 645 432 0 0 0 chrX 7892617 7892665 -158757631 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 645 1672 168 130 20 chrX 7892665 7892833 -158757463 - ORR1C2 LTR MaLR -210 174 2 1 645 1146 185 143 0 chrX 7892833 7893119 -158757177 + Lx7 LINE L1 2856 3182 -2698 1 645 7591 77 6 3 chrX 7893132 7894202 -158756094 - L1_Mus1 LINE L1 0 6567 5496 1 645 10262 184 65 44 chrX 7894210 7894560 -158755736 + Lx7 LINE L1 3190 3545 -2335 1 645 797 233 95 0 chrX 7894560 7894749 -158755547 - B3 SINE B2 -7 209 3 1 645 10262 184 65 44 chrX 7894749 7894769 -158755527 + Lx7 LINE L1 3546 3560 -2320 1 645 2997 50 11 0 chrX 7894769 7895145 -158755151 - L1Md_F2 LINE L1 -1 6581 6202 1 645 1369 63 17 6 chrX 7895145 7895320 -158754976 - B2_Mm2 SINE B2 -17 178 2 1 645 10262 190 73 42 chrX 7895320 7898068 -158752228 + Lx7 LINE L1 3561 6420 -1276 1 645 258 268 0 14 chrX 7898415 7898487 -158751809 + L1MA5 LINE L1 5887 5957 -343 1 645 534 78 78 0 chrX 7898499 7898602 -158751694 - Lx3_Mus LINE L1 -880 6129 6019 1 645 5644 97 40 6 chrX 7898602 7899442 -158750854 + Lx3_Mus LINE L1 6141 7009 0 1 645 293 229 23 57 chrX 7899560 7899648 -158750648 + RSINE1 SINE B4 11 95 -70 1 645 5162 192 19 8 chrX 7899840 7900846 -158749450 + Lx2B LINE L1 5888 6904 -96 1 645 300 197 10 31 chrX 7900868 7900940 -158749356 + Lx4B LINE L1 6142 6232 -826 1 645 4310 54 6 9 chrX 7900940 7901480 -158748816 - L1Md_F3 LINE L1 -2 6582 6045 1 645 254 256 68 23 chrX 7901480 7901495 -158748801 + Lx4B LINE L1 6212 6232 -818 1 645 1412 209 3 25 chrX 7901492 7901811 -158748485 - L1VL1 LINE L1 -6110 312 1 1 645 4888 155 13 8 chrX 7901817 7902641 -158747655 + Lx4B LINE L1 6227 7054 -4 1 645 449 189 33 0 chrX 7902649 7902739 -158747557 - Lx9 LINE L1 -709 6935 6843 1 645 974 152 51 0 chrX 7902754 7902931 -158747365 - B2_Mm2 SINE B2 -8 187 2 1 645 1729 269 50 44 chrX 7902955 7903679 -158746617 - L1_Rod LINE L1 -2729 3118 2391 1 645 613 194 8 16 chrX 7903687 7903813 -158746483 - L1_Rod LINE L1 -1738 4109 3985 1 645 23 0 0 0 chrX 7903841 7903864 -158746432 + AT_rich Low_complexity Low_complexity 1 23 0 1 645 2214 240 38 17 chrX 7905599 7906133 -158744163 - Lx5 LINE L1 0 7050 6506 1 645 227 354 0 12 chrX 7906396 7906479 -158743817 - ID4_ SINE ID 0 83 2 1 645 450 236 30 61 chrX 7906487 7906618 -158743678 - B1F SINE Alu -7 142 16 1 645 1223 132 11 0 chrX 7908778 7908960 -158741336 - B2_Mm2 SINE B2 -9 186 3 1 645 1604 305 88 37 chrX 7909463 7910223 -158740073 - Lx8 LINE L1 -2 7471 6673 1 645 216 298 45 63 chrX 7910756 7910867 -158739429 + B3A SINE B2 87 195 -3 1 645 419 255 45 18 chrX 7911643 7911755 -158738541 + Lx8 LINE L1 7110 7224 -249 1 645 218 148 0 18 chrX 7913282 7913337 -158736959 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 1 645 458 285 65 13 chrX 7913626 7913779 -158736517 + RSINE1 SINE B4 5 165 0 1 645 322 161 16 0 chrX 7914313 7914375 -158735921 - ID4 SINE ID -9 74 12 1 645 219 360 11 11 chrX 7914812 7914899 -158735397 - PB1D10 SINE Alu -8 109 23 1 645 219 331 77 23 chrX 7914934 7914953 -158735343 - ID_B1 SINE B4 0 224 88 1 645 278 315 108 0 chrX 7914953 7915064 -158735232 - B1F SINE Alu -20 129 7 1 645 1232 108 11 11 chrX 7915219 7915406 -158734890 + B2_Mm2 SINE B2 1 187 -8 1 645 230 305 40 60 chrX 7917466 7917616 -158732680 - LTR65 LTR ERV1 -3 666 520 1 645 3666 97 2 11 chrX 7918150 7918671 -158731625 - L1Md_F2 LINE L1 -12 6570 6055 1 645 1845 118 36 125 chrX 7918790 7919149 -158731147 + ORR1A2 LTR MaLR 1 327 0 1 645 2912 162 10 30 chrX 7919152 7919794 -158730502 + ORR1A2-int LTR MaLR 4 639 -1153 1 645 350 229 24 24 chrX 7919718 7919803 -158730493 + MT2B LTR ERVL 161 245 -356 1 645 1554 99 9 0 chrX 7919839 7920072 -158730224 + ORR1A2 LTR MaLR 93 327 0 1 645 754 304 24 47 chrX 7920072 7920423 -158729873 - RLTR11A2 LTR ERVK -185 342 1 1 645 249 155 83 33 chrX 7920543 7920603 -158729693 - ORR1C2 LTR MaLR 0 384 322 1 645 5797 46 16 0 chrX 7920603 7921301 -158728995 - L1Md_F2 LINE L1 -9 6573 5865 1 645 2962 92 48 5 chrX 7921301 7921718 -158728578 - L1Md_F2 LINE L1 -158 6424 5990 1 645 11520 84 4 0 chrX 7921711 7923291 -158727005 - L1_Mm LINE L1 -1348 4535 2950 1 645 2336 103 6 3 chrX 7923266 7923627 -158726669 - L1_Mm LINE L1 -3632 2251 1890 1 645 5571 62 0 0 chrX 7923622 7924311 -158725985 + L1Md_F2 LINE L1 4898 5586 -297 1 645 8184 48 5 0 chrX 7924311 7925301 -158724995 + L1Md_F2 LINE L1 5587 6581 -1 1 645 11812 84 27 7 chrX 7925310 7926907 -158723389 - L1Md_F LINE L1 -2919 2964 1333 1 645 3358 17 25 7 chrX 7926907 7927311 -158722985 + IAPLTR2a LTR ERVK 1 411 0 1 645 11812 125 36 20 chrX 7927311 7928241 -158722055 - L1Md_F LINE L1 -4551 1332 390 1 645 6404 168 167 46 chrX 7928237 7929400 -158720896 - L1_Mur3 LINE L1 -1135 4745 3362 1 645 1246 67 62 0 chrX 7929400 7929579 -158720717 + B2_Mm2 SINE B2 2 191 -4 1 645 336 156 172 0 chrX 7929579 7929643 -158720653 + B3 SINE B2 3 77 -139 1 645 6404 168 167 46 chrX 7929643 7930102 -158720194 - L1_Mur3 LINE L1 -2519 3361 2856 1 645 1342 207 78 113 chrX 7930103 7930500 -158719796 + ORR1C2 LTR MaLR 2 384 0 1 645 570 206 108 42 chrX 7931740 7931907 -158718389 + ORR1B1 LTR MaLR 3 180 -198 1 645 719 112 9 0 chrX 7931909 7932025 -158718271 + (TC)n Simple_repeat Simple_repeat 1 117 0 1 645 948 222 24 24 chrX 7932041 7932249 -158718047 + ORR1B1 LTR MaLR 187 394 0 1 645 777 302 33 39 chrX 7932369 7932731 -158717565 + RLTR11A2 LTR ERVK 1 360 -167 1 645 1520 114 0 0 chrX 7932723 7932951 -158717345 - ORR1A2 LTR MaLR -8 319 92 1 645 316 237 26 0 chrX 7932995 7933071 -158717225 - MT2B LTR ERVL -363 238 161 1 645 2816 172 7 27 chrX 7933073 7933635 -158716661 - ORR1A2-int LTR MaLR -1409 554 4 1 645 397 93 0 0 chrX 7933638 7933692 -158716604 - ORR1A2 LTR MaLR 0 346 293 1 645 8188 85 4 1 chrX 7933692 7934789 -158715507 + L1Md_F2 LINE L1 4486 5585 -298 1 645 7165 96 3 4 chrX 7934790 7935787 -158714509 + L1Md_F2 LINE L1 5587 6582 0 1 645 5617 184 61 24 chrX 7935799 7937193 -158713103 + Lx6 LINE L1 4723 6148 -1312 1 645 432 0 0 0 chrX 7937193 7937241 -158713055 + (TATG)n Simple_repeat Simple_repeat 1 48 0 1 645 2524 224 120 44 chrX 7937241 7937448 -158712848 + Lx6 LINE L1 6149 6409 -1051 1 645 242 282 0 14 chrX 7937798 7937870 -158712426 + L1MA5 LINE L1 5887 5957 -343 1 645 478 117 77 10 chrX 7937882 7937986 -158712310 - Lx3_Mus LINE L1 -880 6129 6019 1 645 5565 109 39 7 chrX 7937986 7938828 -158711468 + Lx3_Mus LINE L1 6141 7009 0 1 645 273 259 22 42 chrX 7938927 7939024 -158711272 + RSINE1 SINE B4 1 95 -70 1 645 4990 184 16 18 chrX 7939216 7939414 -158710882 + Lx2B LINE L1 5888 6080 -920 1 645 4965 118 7 67 chrX 7939414 7940268 -158710028 - RLTR13B4 LTR ERVK 0 803 1 1 645 4990 184 16 18 chrX 7940268 7941055 -158709241 + Lx2B LINE L1 6081 6871 -129 1 645 4612 173 23 13 chrX 7941112 7941988 -158708308 + Lx4B LINE L1 6170 7054 -4 1 645 476 178 33 0 chrX 7941994 7942084 -158708212 - Lx9 LINE L1 -709 6935 6843 1 645 865 124 0 0 chrX 7942139 7942276 -158708020 - B2_Mm2 SINE B2 -55 140 4 1 645 944 290 55 71 chrX 7942303 7942852 -158707444 - L1_Rod LINE L1 -2730 3117 2578 1 645 1069 42 0 0 chrX 7942858 7943000 -158707296 - B1_Mm SINE Alu 0 147 6 1 645 723 256 14 18 chrX 7943008 7943231 -158707065 - L1_Rod LINE L1 -3235 2612 2391 1 645 621 194 8 16 chrX 7943239 7943365 -158706931 - L1_Rod LINE L1 -1738 4109 3985 1 645 21 0 0 0 chrX 7943395 7943416 -158706880 + AT_rich Low_complexity Low_complexity 1 21 0 1 645 2196 240 37 24 chrX 7945158 7945696 -158704600 - Lx5 LINE L1 0 7050 6506 1 645 216 333 0 14 chrX 7945959 7946032 -158704264 - ID4_ SINE ID 0 83 12 1 645 437 244 31 54 chrX 7946050 7946180 -158704116 - B1F SINE Alu -7 142 16 1 645 225 312 94 19 chrX 7946251 7946411 -158703885 - L1MA5 LINE L1 -221 6079 5908 1 645 1301 103 22 0 chrX 7948339 7948524 -158701772 - B2_Mm2 SINE B2 -4 191 3 1 645 377 305 61 66 chrX 7949024 7949252 -158701044 - Lx8 LINE L1 -1 7472 7246 1 645 241 304 87 0 chrX 7949254 7949346 -158700950 - Lx8 LINE L1 -704 6769 6670 1 645 235 309 31 39 chrX 7949876 7950004 -158700292 + B3 SINE B2 85 211 -5 1 645 401 248 56 19 chrX 7950803 7950910 -158699386 + Lx8 LINE L1 7113 7223 -250 1 645 206 148 0 18 chrX 7952435 7952490 -158697806 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 1 645 436 297 60 13 chrX 7952785 7952935 -158697361 + RSINE1 SINE B4 5 161 -4 1 645 226 217 49 16 chrX 7953476 7953537 -158696759 - ID4 SINE ID -9 74 12 1 645 226 339 77 23 chrX 7954105 7954124 -158696172 - ID_B1 SINE B4 0 224 88 1 645 273 324 108 0 chrX 7954124 7954235 -158696061 - B1F SINE Alu -20 129 7 1 645 1269 103 11 11 chrX 7954394 7954581 -158695715 + B2_Mm2 SINE B2 1 187 -8 1 645 1231 41 0 0 chrX 7955520 7955665 -158694631 - B1_Mm SINE Alu 0 147 3 1 645 7331 44 13 17 chrX 7955692 7955977 -158694319 - L1Md_T LINE L1 -6 6632 6340 1 645 736 42 0 0 chrX 7955977 7956072 -158694224 + BC1_Mm scRNA scRNA 1 95 -57 1 645 7331 44 13 17 chrX 7956072 7957321 -158692975 - L1Md_T LINE L1 -6 6339 5053 1 645 15650 26 4 0 chrX 7957310 7959814 -158690482 - L1Md_T LINE L1 0 6582 4071 1 645 38919 13 1 7 chrX 7959812 7965224 -158685072 + L1Md_A LINE L1 211 5586 -297 1 645 8979 14 0 0 chrX 7965225 7966220 -158684076 + L1Md_A LINE L1 5588 6582 0 1 645 23900 41 4 11 chrX 7966223 7970090 -158680206 - L1Md_T LINE L1 -1799 4084 249 1 645 242 298 40 60 chrX 7971122 7971272 -158679024 - LTR65 LTR ERV1 -3 666 520 1 645 35749 74 6 1 chrX 7971786 7978163 -158672133 + L1Md_F2 LINE L1 127 6543 -39 1 645 2193 76 0 0 chrX 7978198 7978501 -158671795 - L1_Mm LINE L1 -3299 2584 2282 1 645 8363 83 3 0 chrX 7978804 7979939 -158670357 - L1_Mm LINE L1 -2463 3420 2283 1 645 4611 90 2 9 chrX 7979945 7980585 -158669711 + L1Md_F2 LINE L1 5948 6582 0 1 645 3442 155 64 16 chrX 7980601 7980883 -158669413 + Lx7 LINE L1 4724 5008 -872 1 645 558 0 0 0 chrX 7980883 7980945 -158669351 + (GA)n Simple_repeat Simple_repeat 2 63 0 1 645 3442 155 64 16 chrX 7980945 7981369 -158668927 + Lx7 LINE L1 5009 5463 -417 1 645 10356 57 1 0 chrX 7981384 7982685 -158667611 - L1_Mm LINE L1 -2481 3402 2101 1 645 4988 31 0 0 chrX 7982685 7983259 -158667037 + L1Md_A LINE L1 6009 6582 0 1 645 2524 204 66 17 chrX 7983260 7984137 -158666159 + Lx7 LINE L1 5483 6420 -1276 1 645 506 115 87 0 chrX 7984565 7984669 -158665627 - Lx3_Mus LINE L1 -880 6129 6017 1 645 5415 114 39 12 chrX 7984669 7985510 -158664786 + Lx3_Mus LINE L1 6146 7009 0 1 645 251 253 20 71 chrX 7985614 7985712 -158664584 + RSINE1 SINE B4 3 95 -70 1 645 5099 194 15 4 chrX 7985904 7986880 -158663416 + Lx2B LINE L1 5888 6874 -126 1 645 4557 180 26 11 chrX 7986937 7987809 -158662487 + Lx4B LINE L1 6170 7054 -4 1 645 455 189 33 0 chrX 7987815 7987905 -158662391 - Lx9 LINE L1 -709 6935 6843 1 645 1027 141 51 0 chrX 7987920 7988097 -158662199 - B2_Mm2 SINE B2 -6 189 4 1 645 1384 289 51 51 chrX 7988124 7988849 -158661447 - L1_Rod LINE L1 -2730 3117 2393 1 645 588 202 8 16 chrX 7988860 7988986 -158661310 - L1_Rod LINE L1 -1738 4109 3985 1 645 5432 69 0 0 chrX 7989021 7989705 -158660591 - L1Md_F2 LINE L1 -2 6580 5897 1 645 2178 244 37 26 chrX 7991486 7992025 -158658271 - Lx5 LINE L1 0 7050 6506 1 645 234 341 0 12 chrX 7992291 7992374 -158657922 - ID4_ SINE ID 0 83 2 1 645 450 244 30 61 chrX 7992382 7992513 -158657783 - B1F SINE Alu -7 142 16 1 645 231 243 100 0 chrX 7992664 7992734 -158657562 - L1MA5 LINE L1 -310 5990 5914 1 645 1155 114 11 0 chrX 7994672 7994856 -158655440 - B2_Mm1t SINE B2 -5 188 3 1 80 1427 307 100 43 chrX 7995353 7996112 -158654184 - Lx8 LINE L1 -2 7471 6670 1 646 250 302 38 38 chrX 7996642 7996774 -158653522 + B3A SINE B2 81 211 -5 1 646 348 267 56 19 chrX 7997573 7997680 -158652616 + Lx8 LINE L1 7113 7223 -250 1 646 212 204 0 18 chrX 7999205 7999260 -158651036 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 1 646 484 257 86 26 chrX 7999556 7999708 -158650588 + RSINE1 SINE B4 5 165 0 1 646 291 194 16 0 chrX 8000244 8000306 -158649990 - ID4 SINE ID -9 74 12 1 646 232 288 62 0 chrX 8000894 8001005 -158649291 - B1F SINE Alu -20 129 7 2 646 1150 124 11 11 chrX 8001159 8001346 -158648950 + B2_Mm2 SINE B2 1 187 -8 3 646 8041 39 2 2 chrX 8003116 8004104 -158646192 - L1_Mm LINE L1 -1987 3896 2909 4 646 8554 29 0 0 chrX 8004112 8005707 -158644589 - L1Md_T LINE L1 -1 6581 4987 5 646 7179 58 0 2 chrX 8005705 8006590 -158643706 - L1Md_T LINE L1 0 6582 5700 6 646 2330 135 34 40 chrX 8006598 8007068 -158643228 - IAPLTR2_Mm LTR ERVK -8 467 1 7 646 37287 31 0 0 chrX 8007068 8011474 -158638822 - L1_Mm LINE L1 -178 5705 1299 8 646 4539 52 0 0 chrX 8011472 8012044 -158638252 - L1Md_A LINE L1 -2856 3027 2456 9 646 5328 80 8 4 chrX 8012042 8013299 -158636997 - L1Md_A LINE L1 -4241 1642 422 9 646 1796 76 0 0 chrX 8013300 8013523 -158636773 + L1Md_F2 LINE L1 5363 5585 -298 1 646 7175 88 8 4 chrX 8013524 8014516 -158635780 + L1Md_F2 LINE L1 5587 6582 0 1 646 1621 122 8 12 chrX 8014517 8014774 -158635522 + L1Md_F2 LINE L1 6324 6579 -3 1 646 5579 99 13 6 chrX 8014781 8015576 -158634720 + L1Md_F2 LINE L1 5780 6579 -3 1 646 5536 161 76 10 chrX 8015582 8015861 -158634435 + Lx7 LINE L1 4727 5019 -861 1 646 576 40 0 0 chrX 8015861 8015936 -158634360 + (GA)n Simple_repeat Simple_repeat 1 75 0 1 646 5536 190 92 15 chrX 8015936 8017226 -158633070 + Lx7 LINE L1 5020 6419 -1277 1 646 228 296 0 14 chrX 8017574 8017646 -158632650 + L1MA5 LINE L1 5887 5957 -343 1 646 424 170 66 0 chrX 8017658 8017764 -158632532 - Lx3_Mus LINE L1 -880 6129 6017 1 646 5442 98 12 3 chrX 8017762 8018517 -158631779 + Lx3_Mus LINE L1 6141 6902 -107 1 646 330 0 60 0 chrX 8018629 8018679 -158631617 + (TTAA)n Simple_repeat Simple_repeat 4 56 0 1 646 244 274 11 35 chrX 8018801 8018888 -158631408 + RSINE1 SINE B4 11 95 -70 1 646 1010 189 5 0 chrX 8019077 8019278 -158631018 + Lx2B LINE L1 5884 6085 -915 1 646 1112 87 0 0 chrX 8019278 8019428 -158630868 - RLTR13B1 LTR ERVK 0 893 744 2 646 25722 17 0 0 chrX 8019428 8023077 -158627219 - L1Md_T LINE L1 -2 6580 2931 2 646 1438 194 67 100 chrX 8024245 8024634 -158625662 + ORR1C1 LTR MaLR 3 378 0 2 646 771 309 21 45 chrX 8024754 8025105 -158625191 + RLTR11A2 LTR ERVK 1 342 -185 2 646 1506 127 0 0 chrX 8025105 8025341 -158624955 - ORR1A2 LTR MaLR 0 327 92 2 646 375 237 82 0 chrX 8025365 8025462 -158624834 - MT2B LTR ERVL -337 264 160 2 646 2913 167 7 27 chrX 8025377 8026027 -158624269 - ORR1A2-int LTR MaLR -1145 647 4 2 646 2006 102 36 123 chrX 8026030 8026388 -158623908 - ORR1A2 LTR MaLR 0 327 1 2 646 3824 92 4 8 chrX 8026505 8027032 -158623264 + L1Md_F2 LINE L1 6055 6579 -3 2 646 251 336 7 27 chrX 8027575 8027725 -158622571 + LTR65 LTR ERV1 520 666 -3 2 646 1264 103 11 11 chrX 8029410 8029597 -158620699 - B2_Mm2 SINE B2 -8 187 1 2 646 213 234 0 0 chrX 8029816 8029863 -158620433 + B1F SINE Alu 83 129 -20 2 646 291 194 16 0 chrX 8030450 8030512 -158619784 + ID4 SINE ID 12 74 -9 3 646 407 265 93 26 chrX 8031054 8031205 -158619091 - RSINE1 SINE B4 0 165 5 3 646 228 185 0 18 chrX 8031494 8031549 -158618747 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 3 646 276 294 53 21 chrX 8033074 8033168 -158617128 - Lx8 LINE L1 -250 7223 7127 3 646 640 312 45 0 chrX 8034594 8034818 -158615478 + Lx8 LINE L1 6670 6903 -570 3 646 444 244 30 61 chrX 8036818 8036949 -158613347 + B1F SINE Alu 16 142 -7 3 646 1690 231 128 24 chrX 8037302 8037794 -158612502 + Lx5 LINE L1 6506 7048 -2 3 646 23 0 0 0 chrX 8039530 8039553 -158610743 + AT_rich Low_complexity Low_complexity 1 23 0 3 646 521 233 16 8 chrX 8039584 8039705 -158610591 + L1_Rod LINE L1 3988 4109 -1738 3 646 1679 278 51 40 chrX 8039713 8040433 -158609863 + L1_Rod LINE L1 2391 3118 -2729 3 646 890 164 53 0 chrX 8040457 8040628 -158609668 + B2_Mm2 SINE B2 2 181 -14 4 646 449 189 33 0 chrX 8040652 8040742 -158609554 + Lx9 LINE L1 6843 6935 -709 4 646 4776 169 21 11 chrX 8040750 8041623 -158608673 - Lx4B LINE L1 -4 7054 6174 4 646 4894 200 11 16 chrX 8041671 8042472 -158607824 - Lx2B LINE L1 -75 6983 6081 4 646 5321 102 7 67 chrX 8042472 8043326 -158606970 + RLTR13B4 LTR ERVK 1 803 0 4 646 4894 198 10 16 chrX 8043326 8043527 -158606769 - Lx2B LINE L1 -920 6080 5884 4 646 244 274 11 35 chrX 8043716 8043803 -158606493 - RSINE1 SINE B4 -70 95 11 4 646 225 24 71 0 chrX 8043924 8043966 -158606330 + (TTAA)n Simple_repeat Simple_repeat 1 45 0 4 646 5389 102 12 3 chrX 8044078 8044833 -158605463 - Lx3_Mus LINE L1 -107 6902 6141 4 646 424 160 66 0 chrX 8044831 8044937 -158605359 + Lx3_Mus LINE L1 6017 6129 -880 4 646 29061 156 55 44 chrX 8045372 8046666 -158603630 - Lx7 LINE L1 -1277 6419 5022 4 646 465 34 0 0 chrX 8046666 8046725 -158603571 + (TC)n Simple_repeat Simple_repeat 1 59 0 4 646 29061 104 11 57 chrX 8046725 8047009 -158603287 - Lx7 LINE L1 -862 5021 4883 4 646 2573 92 13 11 chrX 8047009 8047383 -158602913 - L1Md_F2 LINE L1 -3 6579 6205 5 646 29061 104 11 57 chrX 8047383 8047508 -158602788 - Lx7 LINE L1 -1001 4882 4877 4 646 8260 49 1 0 chrX 8047508 8048501 -158601795 + L1Md_A LINE L1 5589 6582 0 5 646 29061 118 16 50 chrX 8048501 8053835 -158596461 - Lx7 LINE L1 -1007 4876 98 4 646 7202 159 58 40 chrX 8053831 8054997 -158595299 - L1_Mur3 LINE L1 -1135 4745 3518 5 646 1268 96 17 0 chrX 8054997 8055174 -158595122 + B2_Mm2 SINE B2 2 181 -14 5 646 7202 159 58 40 chrX 8055174 8055186 -158595110 - L1_Mur3 LINE L1 -2363 3517 3517 5 646 774 220 102 0 chrX 8055186 8055372 -158594924 + B3 SINE B2 5 209 -7 5 646 7202 159 58 40 chrX 8055372 8055732 -158594564 - L1_Mur3 LINE L1 -2363 3517 3178 5 646 8682 18 0 5 chrX 8055758 8057433 -158592863 - L1Md_A LINE L1 -1 6581 4913 5 646 15028 9 0 0 chrX 8057430 8059799 -158590497 - L1Md_A LINE L1 0 6582 4214 5 646 14864 27 0 0 chrX 8059795 8062164 -158588132 - L1Md_T LINE L1 0 6582 4214 5 646 14847 27 0 0 chrX 8062160 8064529 -158585767 - L1Md_T LINE L1 0 6582 4214 5 646 14849 28 0 0 chrX 8064525 8066894 -158583402 - L1Md_T LINE L1 0 6582 4214 5 646 14837 28 0 0 chrX 8066889 8069258 -158581038 - L1Md_T LINE L1 0 6582 4214 5 646 14849 27 0 0 chrX 8069254 8071623 -158578673 - L1Md_T LINE L1 0 6582 4214 5 646 14864 27 0 0 chrX 8071619 8073988 -158576308 - L1Md_T LINE L1 0 6582 4214 5 646 41094 21 0 6 chrX 8073984 8080394 -158569902 - L1Md_T LINE L1 0 6582 215 5 646 858 202 158 7 chrX 8080401 8080685 -158569611 - L1_Mur3 LINE L1 -2694 3186 2860 5 646 1583 190 86 28 chrX 8080690 8080873 -158569423 + ORR1C2 LTR MaLR 2 186 -198 6 646 990 140 0 0 chrX 8080873 8081052 -158569244 + (TC)n Simple_repeat Simple_repeat 2 180 0 6 646 1583 190 86 28 chrX 8081052 8081230 -158569066 + ORR1C2 LTR MaLR 187 383 -1 6 646 25 31 0 0 chrX 8081264 8081296 -158569000 + AT_rich Low_complexity Low_complexity 1 32 0 6 646 1276 218 52 101 chrX 8082478 8082866 -158567430 + ORR1C1 LTR MaLR 3 371 -7 6 646 760 300 26 40 chrX 8082989 8083339 -158566957 + RLTR11A2 LTR ERVK 1 345 -182 6 646 1571 119 0 0 chrX 8083339 8083575 -158566721 - ORR1A2 LTR MaLR 0 327 92 6 646 244 239 113 0 chrX 8083598 8083669 -158566627 - MT2B LTR ERVL -336 265 187 6 646 2809 170 8 27 chrX 8083611 8084251 -158566045 - ORR1A2-int LTR MaLR -1145 647 4 6 646 1707 128 45 7 chrX 8084254 8084544 -158565752 - ORR1A2 LTR MaLR 0 327 27 6 646 251 182 0 0 chrX 8084579 8084623 -158565673 + PB1D10 SINE Alu 53 96 -21 6 646 323 182 0 0 chrX 8084637 8084703 -158565593 - ORR1B1 LTR MaLR -249 145 80 6 646 296 175 32 0 chrX 8084739 8084802 -158565494 + PB1D10 SINE Alu 53 117 0 6 646 1146 58 0 0 chrX 8084914 8085052 -158565244 - B1_Mus1 SINE Alu -6 142 5 7 646 3767 98 4 8 chrX 8085344 8085871 -158564425 + L1Md_F2 LINE L1 6055 6579 -3 7 646 21 71 0 0 chrX 8085990 8086032 -158564264 + AT_rich Low_complexity Low_complexity 1 42 0 7 646 1230 113 11 11 chrX 8088531 8088718 -158561578 - B2_Mm2 SINE B2 -8 187 1 7 646 263 210 16 0 chrX 8089572 8089634 -158560662 + ID4 SINE ID 12 74 -9 7 646 414 279 92 33 chrX 8090167 8090319 -158559977 - RSINE1 SINE B4 0 165 5 7 646 230 204 0 18 chrX 8090615 8090670 -158559626 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 7 646 370 304 27 0 chrX 8092195 8092307 -158557989 - Lx8 LINE L1 -249 7224 7110 7 646 238 320 39 47 chrX 8093116 8093244 -158557052 - B3 SINE B2 -5 211 85 7 646 1473 311 92 35 chrX 8093775 8094535 -158555761 + Lx8 LINE L1 6670 7472 -1 7 646 2779 15 95 6 chrX 8094972 8095309 -158554987 + IAPLTR1_Mm LTR ERVK 1 367 0 8 646 8130 83 75 49 chrX 8095309 8096581 -158553715 + IAPEz-int LTR ERVK 8 1313 -5168 8 646 29488 20 1 1 chrX 8096580 8099851 -158550445 + IAPEz-int LTR ERVK 3210 6481 0 8 646 2779 15 95 6 chrX 8099851 8100188 -158550108 + IAPLTR1_Mm LTR ERVK 1 367 0 8 646 1167 86 23 0 chrX 8100265 8100440 -158549856 + B2_Mm2 SINE B2 11 189 -6 8 646 474 228 30 61 chrX 8102599 8102730 -158547566 + B1F SINE Alu 16 142 -7 8 646 214 324 0 14 chrX 8102748 8102820 -158547476 + ID4_ SINE ID 12 82 -1 8 646 2186 243 49 23 chrX 8103083 8103614 -158546682 + Lx5 LINE L1 6506 7050 0 8 646 216 402 0 0 chrX 8103732 8103824 -158546472 - PB1 SINE Alu -11 116 25 8 646 3023 47 0 0 chrX 8105406 8105771 -158544525 - L1Md_T LINE L1 0 6582 6218 8 646 12433 45 45 5 chrX 8105771 8107366 -158542930 - L1_Mm LINE L1 -1097 4786 3129 8 646 6122 152 81 43 chrX 8107336 8108067 -158542229 - L1_Mur3 LINE L1 -1591 4289 3518 8 646 1319 85 17 0 chrX 8108067 8108244 -158542052 + B2_Mm2 SINE B2 2 181 -14 8 646 6122 152 81 43 chrX 8108244 8108255 -158542041 - L1_Mur3 LINE L1 -2363 3517 3517 9 646 714 247 102 0 chrX 8108255 8108441 -158541855 + B3 SINE B2 5 209 -7 9 646 6122 152 81 43 chrX 8108441 8109075 -158541221 - L1_Mur3 LINE L1 -2363 3517 2860 8 646 1644 196 86 19 chrX 8109080 8109257 -158541039 + ORR1C2 LTR MaLR 2 183 -201 9 646 942 144 0 0 chrX 8109257 8109437 -158540859 + (TC)n Simple_repeat Simple_repeat 1 180 0 9 646 1644 196 86 19 chrX 8109437 8109618 -158540678 + ORR1C2 LTR MaLR 184 383 -1 9 646 25 51 0 0 chrX 8109644 8109683 -158540613 + AT_rich Low_complexity Low_complexity 1 39 0 9 646 25 0 0 0 chrX 8109806 8109831 -158540465 + AT_rich Low_complexity Low_complexity 1 25 0 9 646 3127 62 0 0 chrX 8109843 8110231 -158540065 - L1Md_T LINE L1 0 6582 6195 9 646 1363 209 51 105 chrX 8111298 8111688 -158538608 + ORR1C1 LTR MaLR 3 371 -7 9 646 880 290 22 41 chrX 8111811 8112162 -158538134 + RLTR11A2 LTR ERVK 1 344 -183 9 646 1570 115 0 0 chrX 8112162 8112397 -158537899 - ORR1A2 LTR MaLR 0 327 93 9 646 244 239 113 0 chrX 8112421 8112492 -158537804 - MT2B LTR ERVL -336 265 187 1 646 2899 165 10 28 chrX 8112434 8113074 -158537222 - ORR1A2-int LTR MaLR -1145 647 4 9 646 1700 126 45 7 chrX 8113077 8113365 -158536931 - ORR1A2 LTR MaLR 0 327 29 9 646 241 204 0 0 chrX 8113402 8113446 -158536850 + PB1D10 SINE Alu 53 96 -21 1 646 323 198 6 0 chrX 8113460 8113549 -158536747 - ORR1B1 LTR MaLR -249 145 22 1 646 296 175 32 0 chrX 8113562 8113625 -158536671 + PB1D10 SINE Alu 53 117 0 1 646 1135 58 0 0 chrX 8113737 8113875 -158536421 - B1_Mus1 SINE Alu -6 142 5 1 646 3857 92 2 8 chrX 8114179 8114707 -158535589 + L1Md_F2 LINE L1 6055 6579 -3 1 646 226 331 33 46 chrX 8114979 8115131 -158535165 + MER20 DNA MER1_type 70 219 0 1 646 1173 124 11 11 chrX 8117085 8117272 -158533024 - B2_Mm2 SINE B2 -8 187 1 1 646 266 324 108 0 chrX 8117427 8117538 -158532758 + B1F SINE Alu 7 129 -20 1 646 257 226 16 0 chrX 8118127 8118189 -158532107 + ID4 SINE ID 12 74 -9 1 646 394 272 93 26 chrX 8118724 8118875 -158531421 - RSINE1 SINE B4 0 165 5 1 646 212 204 0 18 chrX 8119171 8119226 -158531070 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 1 646 392 257 56 19 chrX 8120752 8120859 -158529437 - Lx8 LINE L1 -250 7223 7113 1 646 270 293 31 39 chrX 8121657 8121785 -158528511 - B3 SINE B2 -5 211 85 1 646 1479 309 87 33 chrX 8122322 8123081 -158527215 + Lx8 LINE L1 6673 7472 -1 1 646 1400 77 11 0 chrX 8123578 8123761 -158526535 + B2_Mm1t SINE B2 3 187 -6 1 647 8616 26 1 0 chrX 8127252 8128715 -158521581 - L1Md_T LINE L1 0 6582 5119 1 647 38307 43 0 3 chrX 8128716 8135064 -158515232 - L1Md_A LINE L1 0 6585 162 1 647 566 210 8 16 chrX 8135209 8135335 -158514961 + L1_Rod LINE L1 3985 4109 -1738 1 647 1512 278 59 55 chrX 8135343 8136067 -158514229 + L1_Rod LINE L1 2391 3117 -2730 1 647 891 175 51 0 chrX 8136094 8136271 -158514025 + B2_Mm2 SINE B2 4 189 -6 1 647 436 200 33 0 chrX 8136286 8136376 -158513920 + Lx9 LINE L1 6843 6935 -709 1 647 4550 176 25 13 chrX 8136382 8137256 -158513040 - Lx4B LINE L1 -4 7054 6170 1 647 4915 204 14 3 chrX 8137313 8138289 -158512007 - Lx2B LINE L1 -126 6874 5888 1 647 243 264 20 71 chrX 8138481 8138579 -158511717 - RSINE1 SINE B4 -70 95 3 1 647 5324 113 40 13 chrX 8138684 8139525 -158510771 - Lx3_Mus LINE L1 0 7009 6146 1 647 457 135 87 0 chrX 8139525 8139629 -158510667 + Lx3_Mus LINE L1 6017 6129 -880 1 647 5459 196 74 19 chrX 8140052 8141360 -158508936 - Lx7 LINE L1 -1276 6420 5017 1 647 477 0 0 0 chrX 8141360 8141413 -158508883 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 647 5459 171 57 14 chrX 8141413 8141702 -158508594 - Lx7 LINE L1 -864 5016 4723 1 647 4466 102 2 11 chrX 8141716 8142361 -158507935 - L1Md_F2 LINE L1 0 6582 5944 1 647 8474 83 1 0 chrX 8142363 8143500 -158506796 + L1_Mm LINE L1 2283 3420 -2463 1 647 2315 69 0 0 chrX 8143798 8144101 -158506195 + L1_Mm LINE L1 2282 2584 -3299 1 647 35855 73 7 0 chrX 8144136 8150524 -158499772 - L1Md_F2 LINE L1 -39 6543 113 1 647 242 298 40 60 chrX 8151030 8151180 -158499116 + LTR65 LTR ERV1 520 666 -3 1 647 32769 41 5 8 chrX 8152211 8157124 -158493172 + L1Md_A LINE L1 249 5141 -742 1 647 1849 71 4 0 chrX 8157124 8157363 -158492933 + L1Md_A LINE L1 6343 6582 0 1 647 1143 75 0 0 chrX 8157376 8157523 -158492773 + B1_Mm SINE Alu 1 147 0 1 647 1151 130 11 11 chrX 8158459 8158646 -158491650 - B2_Mm2 SINE B2 -8 187 1 1 647 246 293 121 0 chrX 8158813 8158912 -158491384 + B1F SINE Alu 19 129 -20 1 647 238 258 16 0 chrX 8159499 8159561 -158490735 + ID4 SINE ID 12 74 -9 1 647 448 297 60 13 chrX 8160101 8160251 -158490045 - RSINE1 SINE B4 -4 161 5 1 647 206 148 0 18 chrX 8160556 8160611 -158489685 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 1 647 404 248 56 19 chrX 8162138 8162245 -158488051 - Lx8 LINE L1 -250 7223 7113 1 647 355 308 57 57 chrX 8163799 8164026 -158486270 + Lx8 LINE L1 7246 7472 -1 1 647 1230 113 11 5 chrX 8164526 8164712 -158485584 + B2_Mm1t SINE B2 3 189 -4 1 647 264 241 49 25 chrX 8166640 8166721 -158483575 + L1MA5 LINE L1 5908 5990 -310 1 647 437 244 31 54 chrX 8166870 8167000 -158483296 + B1F SINE Alu 16 142 -7 1 647 216 333 0 14 chrX 8167018 8167091 -158483205 + ID4_ SINE ID 12 83 0 1 647 2072 250 39 24 chrX 8167353 8167890 -158482406 + Lx5 LINE L1 6506 7050 0 1 647 21 0 0 0 chrX 8169631 8169652 -158480644 + AT_rich Low_complexity Low_complexity 1 21 0 1 647 422 196 11 21 chrX 8169682 8169776 -158480520 + L1_Rod LINE L1 3985 4077 -1770 1 647 783 0 0 0 chrX 8169776 8169863 -158480433 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 1 647 28 0 0 0 chrX 8169863 8169891 -158480405 + AT_rich Low_complexity Low_complexity 1 28 0 1 647 2444 52 3 0 chrX 8169892 8170198 -158480098 - L1Md_A LINE L1 0 6582 6276 1 647 743 261 13 17 chrX 8170235 8170469 -158479827 + L1_Rod LINE L1 2380 2612 -3235 1 647 1058 49 0 0 chrX 8170477 8170619 -158479677 + B1_Mm SINE Alu 6 147 0 1 647 935 290 56 72 chrX 8170657 8171196 -158479100 + L1_Rod LINE L1 2588 3117 -2730 1 647 876 154 51 11 chrX 8171223 8171400 -158478896 + B2_Mm2 SINE B2 4 187 -8 1 647 476 178 33 0 chrX 8171415 8171505 -158478791 + Lx9 LINE L1 6843 6935 -709 1 647 4525 175 25 13 chrX 8171511 8172385 -158477911 - Lx4B LINE L1 -4 7054 6170 1 647 4976 201 14 4 chrX 8172441 8173419 -158476877 - Lx2B LINE L1 -125 6875 5888 1 647 251 253 20 71 chrX 8173611 8173709 -158476587 - RSINE1 SINE B4 -70 95 3 1 647 5340 116 39 6 chrX 8173820 8174661 -158475635 - Lx3_Mus LINE L1 0 7009 6141 1 647 468 126 78 0 chrX 8174661 8174764 -158475532 + Lx3_Mus LINE L1 6019 6129 -880 1 647 5618 190 62 17 chrX 8175196 8176803 -158473493 - Lx7 LINE L1 -1276 6420 4727 1 647 3675 121 0 7 chrX 8176814 8177387 -158472909 - L1Md_F2 LINE L1 0 6582 6026 1 647 21015 19 4 0 chrX 8177390 8179797 -158470499 + L1Md_A LINE L1 3171 5586 -297 1 647 8852 18 1 0 chrX 8179797 8180790 -158469506 + L1Md_A LINE L1 5587 6580 -2 1 647 244 167 0 18 chrX 8182164 8182219 -158468077 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 1 647 390 272 93 26 chrX 8182515 8182666 -158467630 + RSINE1 SINE B4 5 165 0 1 647 291 194 16 0 chrX 8183195 8183257 -158467039 - ID4 SINE ID -9 74 12 1 647 297 292 113 0 chrX 8183846 8183952 -158466344 - B1F SINE Alu -20 129 12 1 647 1332 91 11 11 chrX 8184108 8184297 -158465999 + B2_Mm2 SINE B2 1 189 -6 1 647 244 306 58 64 chrX 8186221 8186392 -158463904 - LTR65 LTR ERV1 -3 666 497 1 647 453 292 75 0 chrX 8186764 8186911 -158463385 + Lx8 LINE L1 6778 6935 -538 1 647 1535 131 15 54 chrX 8186928 8187187 -158463109 - L1_Mus1 LINE L1 0 6567 6319 1 647 306 206 9 0 chrX 8187187 8187294 -158463002 + ORR1A1-int LTR MaLR 540 647 -1145 1 647 318 258 93 0 chrX 8187210 8187307 -158462989 + MT2B LTR ERVL 160 265 -336 1 647 1585 114 0 0 chrX 8187330 8187566 -158462730 + ORR1A2 LTR MaLR 92 327 0 1 647 733 287 67 18 chrX 8187566 8187895 -158462401 - RLTR11A2 LTR ERVK -182 345 1 1 647 983 196 10 25 chrX 8188018 8188222 -158462074 - ORR1B1 LTR MaLR -7 387 187 1 647 2292 107 0 33 chrX 8188231 8188568 -158461728 - IAPLTR3 LTR ERVK 0 326 1 1 647 8494 70 11 45 chrX 8188568 8189740 -158460556 - IAPLTR3-int LTR ERVK -871 6809 5747 1 647 3769 39 2 5 chrX 8190002 8190446 -158459850 - IAPLTR3-int LTR ERVK -1075 5746 5304 1 647 11104 54 49 6 chrX 8190444 8191856 -158458440 - IAPLTR3-int LTR ERVK -5349 1472 1 1 647 2423 89 0 33 chrX 8191856 8192193 -158458103 - IAPLTR3 LTR ERVK 0 326 1 1 647 507 241 109 46 chrX 8192230 8192404 -158457892 - ORR1B1 LTR MaLR -191 187 3 1 647 1436 205 117 26 chrX 8193655 8193833 -158456463 - ORR1C2 LTR MaLR 0 384 189 1 647 1058 118 0 11 chrX 8193833 8194013 -158456283 + (GA)n Simple_repeat Simple_repeat 2 179 0 1 647 1436 205 117 26 chrX 8194013 8194185 -158456111 - ORR1C2 LTR MaLR -196 188 2 1 647 7737 171 82 31 chrX 8194190 8194823 -158455473 + L1_Mur3 LINE L1 2860 3521 -2359 1 647 734 228 112 16 chrX 8194823 8195010 -158455286 - B3 SINE B2 -7 209 5 1 647 1411 64 27 0 chrX 8195012 8195199 -158455097 - B2_Mm2 SINE B2 -2 193 2 1 647 7737 171 82 31 chrX 8195199 8196356 -158453940 + L1_Mur3 LINE L1 3522 4745 -1135 1 647 29622 103 10 9 chrX 8196352 8201352 -158448944 + L1Md_F LINE L1 390 5395 -488 1 647 880 257 191 28 chrX 8201346 8201829 -158448467 + Lx7 LINE L1 5876 6420 -1276 1 647 577 162 7 42 chrX 8202067 8202194 -158448102 + L1Md_F2 LINE L1 5500 5614 -698 1 647 6865 96 15 14 chrX 8202195 8203174 -158447122 + L1Md_F2 LINE L1 5589 6568 -14 1 647 342 0 0 0 chrX 8203178 8203216 -158447080 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1 647 5047 116 11 13 chrX 8203216 8203976 -158446320 + L1Md_F2 LINE L1 5800 6557 -25 1 647 288 53 0 0 chrX 8203979 8204017 -158446279 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 1 647 5491 175 63 10 chrX 8204024 8204304 -158445992 + Lx7 LINE L1 4724 4998 -882 1 647 915 88 0 0 chrX 8204304 8204452 -158445844 + (GA)n Simple_repeat Simple_repeat 1 148 0 1 647 5491 200 74 16 chrX 8204452 8205762 -158444534 + Lx7 LINE L1 4999 6420 -1276 1 647 418 170 66 0 chrX 8206194 8206300 -158443996 - Lx3_Mus LINE L1 -880 6129 6017 1 647 5250 106 13 5 chrX 8206298 8207054 -158443242 + Lx3_Mus LINE L1 6141 6902 -107 1 647 312 120 0 0 chrX 8207170 8207220 -158443076 + (TTAA)n Simple_repeat Simple_repeat 3 52 0 1 647 244 274 11 35 chrX 8207344 8207431 -158442865 + RSINE1 SINE B4 11 95 -70 1 647 4879 204 12 17 chrX 8207623 8207821 -158442475 + Lx2B LINE L1 5888 6079 -921 1 647 5241 105 7 67 chrX 8207821 8208675 -158441621 - RLTR13B4 LTR ERVK 0 803 1 1 647 4879 206 17 16 chrX 8208675 8209512 -158440784 + Lx2B LINE L1 6080 7056 -2 1 647 4467 192 17 19 chrX 8209524 8210409 -158439887 + Lx4B LINE L1 6170 7052 -6 1 647 7952 11 0 0 chrX 8210467 8211351 -158438945 + L1Md_A LINE L1 4703 5586 -297 1 647 9185 3 0 0 chrX 8211351 8212347 -158437949 + L1Md_A LINE L1 5587 6582 0 1 647 210 71 0 0 chrX 8212350 8212378 -158437918 + (A)n Simple_repeat Simple_repeat 1 28 0 1 647 1024 277 27 39 chrX 8212384 8212797 -158437499 - L1_Rod LINE L1 -3049 2798 2391 1 647 549 192 41 16 chrX 8212805 8212927 -158437369 - L1_Rod LINE L1 -1738 4109 3985 1 647 3127 67 64 45 chrX 8213938 8214404 -158435892 - IAPLTR2_Mm LTR ERVK 0 475 1 2 647 2157 241 49 21 chrX 8215177 8215707 -158434589 - Lx5 LINE L1 0 7050 6506 2 647 490 211 30 61 chrX 8216064 8216195 -158434101 - B1F SINE Alu -7 142 16 2 647 1243 111 22 0 chrX 8218357 8218538 -158431758 - B2_Mm2 SINE B2 -8 187 3 2 647 1519 309 80 27 chrX 8219040 8219744 -158430552 - Lx8 LINE L1 -1 7472 6732 2 647 298 324 36 0 chrX 8221270 8221381 -158428915 + Lx8 LINE L1 7110 7224 -249 2 647 228 185 0 18 chrX 8222905 8222960 -158427336 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 2 647 455 282 82 34 chrX 8223262 8223409 -158426887 + RSINE1 SINE B4 12 165 0 2 647 259 292 123 9 chrX 8223864 8223978 -158426318 - B1F SINE Alu -11 138 12 2 647 1223 119 11 11 chrX 8224138 8224325 -158425971 + B2_Mm2 SINE B2 1 187 -8 2 647 21 71 0 0 chrX 8226821 8226863 -158423433 + AT_rich Low_complexity Low_complexity 1 42 0 2 647 12221 47 1 0 chrX 8226964 8228444 -158421852 + L1Md_F3 LINE L1 4106 5586 -297 2 647 8012 43 10 4 chrX 8228444 8229422 -158420874 + L1Md_F3 LINE L1 5587 6570 -14 2 647 1379 119 5 0 chrX 8229500 8229693 -158420603 - L1Md_T LINE L1 -335 6247 6054 2 647 240 35 0 0 chrX 8230209 8230238 -158420058 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 647 207 114 0 0 chrX 8230826 8230861 -158419435 + (CATCC)n Simple_repeat Simple_repeat 3 37 0 2 647 371 148 246 25 chrX 8231369 8231487 -158418809 - B1_Mur2 SINE Alu -2 147 4 2 647 21 57 0 0 chrX 8232107 8232142 -158418154 + AT_rich Low_complexity Low_complexity 1 35 0 2 647 293 328 25 33 chrX 8232158 8232278 -158418018 + RSINE1 SINE B4 12 130 -35 2 647 558 213 101 16 chrX 8232678 8232807 -158417489 - ID_B1 SINE B4 -1 223 84 2 647 39594 33 2 6 chrX 8233132 8239369 -158410927 - L1Md_T LINE L1 0 6582 377 2 647 2072 83 39 123 chrX 8241209 8241566 -158408730 + ORR1A2 LTR MaLR 1 327 0 2 647 2903 172 7 27 chrX 8241569 8242219 -158408077 + ORR1A2-int LTR MaLR 4 647 -1145 2 647 344 258 82 0 chrX 8242135 8242232 -158408064 + MT2B LTR ERVL 161 265 -336 2 647 1617 106 0 0 chrX 8242255 8242491 -158407805 + ORR1A2 LTR MaLR 92 327 0 2 647 854 298 21 45 chrX 8242491 8242842 -158407454 - RLTR11A2 LTR ERVK -185 342 1 2 647 304 106 43 0 chrX 8242965 8243012 -158407284 - ORR1A4 LTR MaLR -7 322 274 2 647 599 77 19 9 chrX 8243014 8243119 -158407177 - L1Md_F2 LINE L1 0 6582 6477 2 647 9569 63 0 1 chrX 8243120 8244851 -158405445 - L1Md_F2 LINE L1 -224 6358 4629 2 647 865 213 3 43 chrX 8244851 8245059 -158405237 - ORR1B1 LTR MaLR -38 356 149 2 647 488 223 117 37 chrX 8245081 8245244 -158405052 - ORR1B1 LTR MaLR -200 178 3 2 647 1316 147 0 22 chrX 8246368 8246590 -158403706 - L1VL1 LINE L1 -6205 217 1 2 647 3559 108 23 0 chrX 8246592 8247119 -158403177 - L1Md_F2 LINE L1 -242 6340 5802 2 647 222 37 0 0 chrX 8247119 8247146 -158403150 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2 647 4030 104 7 3 chrX 8247150 8247729 -158402567 - L1Md_F2 LINE L1 -12 6570 5990 2 647 23195 98 19 6 chrX 8247730 8251813 -158398483 - L1Md_F LINE L1 -1356 4527 390 2 647 6568 163 63 34 chrX 8251809 8252972 -158397324 - L1_Mur3 LINE L1 -1135 4745 3518 2 647 1245 73 56 0 chrX 8252972 8253151 -158397145 + B2_Mm2 SINE B2 2 190 -5 2 647 779 209 111 16 chrX 8253153 8253343 -158396953 + B3 SINE B2 5 212 -4 2 647 6568 163 63 34 chrX 8253343 8253580 -158396716 - L1_Mur3 LINE L1 -2363 3517 3300 2 647 474 65 0 0 chrX 8253582 8253644 -158396652 + (TC)n Simple_repeat Simple_repeat 2 63 0 2 647 848 167 108 15 chrX 8253669 8253864 -158396432 + ORR1C2 LTR MaLR 172 384 0 2 647 1388 214 49 100 chrX 8255111 8255500 -158394796 + ORR1C1 LTR MaLR 3 371 -7 2 647 786 308 23 40 chrX 8255623 8255974 -158394322 + RLTR11A2 LTR ERVK 1 345 -182 2 647 1521 132 0 0 chrX 8255974 8256209 -158394087 - ORR1A2 LTR MaLR 0 327 93 2 647 332 264 32 21 chrX 8256238 8256331 -158393965 - MT2B LTR ERVL -348 253 160 2 647 2853 166 5 28 chrX 8256327 8256897 -158393399 - ORR1A2-int LTR MaLR -1403 560 4 2 647 1803 115 39 124 chrX 8256901 8257257 -158393039 - ORR1A2 LTR MaLR -1 326 1 2 647 725 118 0 0 chrX 8257374 8257476 -158392820 + L1Md_F2 LINE L1 6055 6156 -426 2 648 243 336 7 27 chrX 8257978 8258128 -158392168 + LTR65 LTR ERV1 520 666 -3 2 648 1190 113 11 11 chrX 8259814 8260001 -158390295 - B2_Mm2 SINE B2 -8 187 1 2 648 232 288 62 0 chrX 8260156 8260267 -158390029 + B1F SINE Alu 7 129 -20 2 648 253 254 28 0 chrX 8260853 8260924 -158389372 + ID SINE ID 12 84 -140 2 648 428 270 86 26 chrX 8261450 8261602 -158388694 - RSINE1 SINE B4 0 165 5 2 648 228 185 0 18 chrX 8261898 8261953 -158388343 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 2 648 285 294 58 23 chrX 8263474 8263561 -158386735 - Lx8 LINE L1 -250 7223 7134 2 648 1488 304 101 45 chrX 8264908 8265667 -158384629 + Lx8 LINE L1 6670 7471 -2 2 648 1296 104 11 0 chrX 8266166 8266349 -158383947 + B2_Mm1t SINE B2 3 187 -6 2 648 422 244 30 61 chrX 8268511 8268642 -158381654 + B1F SINE Alu 16 142 -7 2 648 233 341 0 12 chrX 8268650 8268733 -158381563 + ID4_ SINE ID 2 83 0 2 648 2094 255 41 19 chrX 8268997 8269528 -158380768 + Lx5 LINE L1 6506 7048 -2 2 648 23 0 0 0 chrX 8271258 8271281 -158379015 + AT_rich Low_complexity Low_complexity 1 23 0 2 648 555 217 16 8 chrX 8271312 8271433 -158378863 + L1_Rod LINE L1 3988 4109 -1738 2 648 1718 276 50 40 chrX 8271441 8272162 -158378134 + L1_Rod LINE L1 2391 3118 -2729 2 648 1012 147 51 0 chrX 8272186 8272363 -158377933 + B2_Mm2 SINE B2 2 187 -8 2 648 360 202 38 0 chrX 8272364 8272443 -158377853 + Lx9 LINE L1 6854 6935 -709 2 648 4751 176 14 11 chrX 8272451 8273330 -158376966 - Lx4B LINE L1 -4 7054 6174 2 648 4793 199 17 18 chrX 8273378 8274175 -158376121 - Lx2B LINE L1 -119 6881 6080 2 648 5244 108 7 67 chrX 8274175 8275029 -158375267 + RLTR13B4 LTR ERVK 1 803 0 2 648 4793 199 17 18 chrX 8275029 8275230 -158375066 - Lx2B LINE L1 -921 6079 5884 2 648 253 262 11 45 chrX 8275419 8275507 -158374789 - RSINE1 SINE B4 -70 95 11 2 648 411 21 0 0 chrX 8275620 8275668 -158374628 + (TTAA)n Simple_repeat Simple_repeat 3 50 0 2 648 5237 101 15 5 chrX 8275784 8276539 -158373757 - Lx3_Mus LINE L1 -107 6902 6141 2 648 418 170 66 0 chrX 8276537 8276643 -158373653 + Lx3_Mus LINE L1 6017 6129 -880 2 648 240 282 0 14 chrX 8276655 8276727 -158373569 - L1MA5 LINE L1 -343 5957 5887 2 648 1279 270 161 36 chrX 8277076 8277281 -158373015 - Lx7 LINE L1 -1276 6420 6195 2 648 516 32 0 0 chrX 8277281 8277343 -158372953 + (CATA)n Simple_repeat Simple_repeat 3 64 0 2 648 1279 270 161 36 chrX 8277343 8277714 -158372582 - Lx7 LINE L1 -1502 6194 5773 2 648 27 0 0 0 chrX 8278393 8278420 -158371876 + AT_rich Low_complexity Low_complexity 1 27 0 2 648 569 198 8 16 chrX 8278450 8278573 -158371723 + L1_Rod LINE L1 3985 4106 -1741 2 648 1515 288 48 43 chrX 8278584 8279307 -158370989 + L1_Rod LINE L1 2391 3117 -2730 2 648 1049 130 51 0 chrX 8279334 8279511 -158370785 + B2_Mm2 SINE B2 4 189 -6 2 648 455 189 33 0 chrX 8279526 8279616 -158370680 + Lx9 LINE L1 6843 6935 -709 2 648 4642 170 24 13 chrX 8279621 8280497 -158369799 - Lx4B LINE L1 -3 7055 6170 2 648 4741 197 22 8 chrX 8280561 8281527 -158368769 - Lx2B LINE L1 -134 6866 5888 2 648 242 260 24 61 chrX 8281720 8281802 -158368494 - RSINE1 SINE B4 -71 94 16 2 648 5212 120 46 2 chrX 8281937 8282762 -158367534 - Lx3_Mus LINE L1 -8 7001 6141 2 648 440 155 78 0 chrX 8282762 8282865 -158367431 + Lx3_Mus LINE L1 6019 6129 -880 2 648 4188 197 81 21 chrX 8283308 8284633 -158365663 - Lx6 LINE L1 -1066 6394 4977 2 648 6303 102 18 6 chrX 8284619 8285520 -158364776 - L1Md_F2 LINE L1 0 6582 5671 2 648 1171 7 0 0 chrX 8285515 8285650 -158364646 - L1_Mm LINE L1 -2110 3773 3639 2 648 725 62 0 1 chrX 8285652 8285750 -158364546 - L1_Mm LINE L1 -1734 4409 4287 2 648 423 0 0 0 chrX 8285750 8285797 -158364499 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2 648 8613 32 2 0 chrX 8285815 8286809 -158363487 - L1Md_A LINE L1 0 6582 5587 2 648 412 22 0 0 chrX 8286825 8286870 -158363426 + L1Md_A LINE L1 5524 5568 -315 2 648 7816 56 6 1 chrX 8286865 8287942 -158362354 + L1Md_F2 LINE L1 4860 5941 -641 2 648 1848 69 0 0 chrX 8287940 8288173 -158362123 + L1Md_F2 LINE L1 5348 5580 -303 2 648 6766 106 15 5 chrX 8288179 8289165 -158361131 + L1Md_F2 LINE L1 5587 6582 0 2 648 831 161 0 20 chrX 8289172 8289324 -158360972 + Lx7 LINE L1 4723 4871 -1009 2 648 25552 22 0 0 chrX 8289324 8292980 -158357316 - L1Md_T LINE L1 0 6582 2969 2 648 4805 196 71 23 chrX 8292980 8294453 -158355843 + Lx7 LINE L1 4860 6420 -1276 2 648 417 175 78 0 chrX 8294886 8294989 -158355307 - Lx3_Mus LINE L1 -880 6129 6019 2 648 5496 108 40 7 chrX 8294989 8295830 -158354466 + Lx3_Mus LINE L1 6141 7009 0 2 648 249 256 24 60 chrX 8295957 8296040 -158354256 + RSINE1 SINE B4 16 95 -70 2 648 4910 195 19 8 chrX 8296232 8297209 -158353087 + Lx2B LINE L1 5888 6875 -125 2 648 4325 180 34 16 chrX 8297265 8298129 -158352167 + Lx4B LINE L1 6170 7048 -10 2 648 415 200 33 0 chrX 8298141 8298231 -158352065 - Lx9 LINE L1 -709 6935 6843 2 648 979 153 51 0 chrX 8298246 8298422 -158351874 - B2_Mm2 SINE B2 -7 188 4 2 648 1437 297 47 42 chrX 8298449 8299172 -158351124 - L1_Rod LINE L1 -2730 3117 2391 2 648 574 211 8 18 chrX 8299180 8299333 -158350963 - L1_Rod LINE L1 -1738 4109 3958 2 648 247 333 0 21 chrX 8300129 8300224 -158350072 + RSINE1 SINE B4 73 165 0 2 648 291 194 16 0 chrX 8300758 8300820 -158349476 - ID4 SINE ID -9 74 12 2 648 1312 92 11 11 chrX 8301671 8301858 -158348438 + B2_Mm2 SINE B2 1 187 -8 2 648 252 319 41 47 chrX 8303794 8303965 -158346331 - LTR65 LTR ERV1 -3 666 497 2 648 521 263 73 0 chrX 8304347 8304484 -158345812 + Lx8 LINE L1 6789 6935 -538 2 648 1562 123 19 54 chrX 8304502 8304760 -158345536 - L1_Mus1 LINE L1 0 6567 6319 2 648 314 204 0 0 chrX 8304760 8304868 -158345428 + ORR1A1-int LTR MaLR 540 647 -1145 2 648 358 247 92 10 chrX 8304783 8304881 -158345415 + MT2B LTR ERVL 160 265 -336 3 648 1577 114 0 0 chrX 8304904 8305140 -158345156 + ORR1A2 LTR MaLR 92 327 0 3 648 727 300 27 44 chrX 8305140 8305490 -158344806 - RLTR11A2 LTR ERVK -183 344 1 3 648 998 191 10 25 chrX 8305612 8305816 -158344480 - ORR1B1 LTR MaLR -7 387 187 3 648 2317 107 0 33 chrX 8305825 8306162 -158344134 - IAPLTR3 LTR ERVK 0 326 1 3 648 9018 45 0 9 chrX 8306162 8307227 -158343069 - IAPLTR3-int LTR ERVK -20 6801 5747 3 648 8565 49 89 4 chrX 8307551 8308646 -158341650 - IAPLTR3-int LTR ERVK -5632 1189 1 3 648 2352 92 0 33 chrX 8308646 8308983 -158341313 - IAPLTR3 LTR ERVK 0 326 1 3 648 536 205 107 47 chrX 8309026 8309195 -158341101 - ORR1B1 LTR MaLR -197 181 3 3 648 1464 193 103 33 chrX 8310447 8310806 -158339490 - ORR1C2 LTR MaLR 0 384 1 3 648 1041 178 123 4 chrX 8310806 8311082 -158339214 + Lx7 LINE L1 2856 3164 -2716 3 648 7292 90 8 4 chrX 8311094 8312175 -158338121 - L1Md_F2 LINE L1 -1 6581 5496 3 648 12205 170 52 31 chrX 8312183 8312534 -158337762 + Lx7 LINE L1 3190 3521 -2359 3 648 733 241 93 31 chrX 8312534 8312727 -158337569 - B3 SINE B2 -7 209 5 3 648 12205 183 60 31 chrX 8312727 8315502 -158334794 + Lx7 LINE L1 3522 6420 -1276 3 648 268 268 0 14 chrX 8315866 8315938 -158334358 + L1MA5 LINE L1 5887 5957 -343 3 648 441 164 67 0 chrX 8315950 8316054 -158334242 - Lx3_Mus LINE L1 -880 6129 6019 3 648 5805 103 22 6 chrX 8316054 8316909 -158333387 + Lx3_Mus LINE L1 6141 7009 0 3 648 275 250 21 42 chrX 8317021 8317118 -158333178 + RSINE1 SINE B4 1 95 -70 3 648 4797 206 17 11 chrX 8317310 8318319 -158331977 + Lx2B LINE L1 5888 6902 -98 3 648 4637 181 19 18 chrX 8318347 8319229 -158331067 + Lx4B LINE L1 6170 7052 -6 3 648 447 191 45 0 chrX 8319239 8319328 -158330968 - Lx9 LINE L1 -709 6935 6843 3 648 928 157 51 0 chrX 8319343 8319521 -158330775 - B2_Mm2 SINE B2 -7 188 2 3 648 1632 282 56 35 chrX 8319545 8320258 -158330038 - L1_Rod LINE L1 -2729 3118 2391 3 648 549 201 45 23 chrX 8320266 8320410 -158329886 - L1_Rod LINE L1 -1738 4109 3968 3 648 3352 18 31 0 chrX 8321556 8321940 -158328356 + MTA_Mm LTR MaLR 1 396 0 3 648 9378 31 6 0 chrX 8321940 8323032 -158327264 + MTA_Mm-int LTR MaLR 1 1098 0 3 648 3333 21 31 0 chrX 8323032 8323416 -158326880 + MTA_Mm LTR MaLR 1 396 0 3 648 2178 247 43 17 chrX 8324035 8324566 -158325730 - Lx5 LINE L1 0 7050 6506 3 648 473 219 30 61 chrX 8324916 8325047 -158325249 - B1F SINE Alu -7 142 16 3 648 252 275 102 34 chrX 8325105 8325282 -158325014 - L1MA5 LINE L1 -204 6096 5908 3 648 1257 126 21 0 chrX 8327212 8327403 -158322893 - B2_Mm2 SINE B2 0 195 1 3 648 1353 316 78 29 chrX 8327901 8328630 -158321666 - Lx8 LINE L1 -1 7472 6692 3 648 243 320 46 46 chrX 8329178 8329309 -158320987 + B3 SINE B2 81 211 -5 3 648 350 299 28 0 chrX 8330131 8330238 -158320058 + Lx8 LINE L1 7110 7219 -254 3 648 228 185 0 18 chrX 8331771 8331826 -158318470 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 3 648 377 255 105 46 chrX 8332123 8332275 -158318021 + RSINE1 SINE B4 5 165 0 3 648 297 191 16 0 chrX 8332809 8332872 -158317424 - ID4 SINE ID -8 75 12 3 648 275 283 113 17 chrX 8333432 8333547 -158316749 - B1F SINE Alu -2 147 22 3 648 36159 45 0 4 chrX 8333714 8338980 -158311316 + L1Md_T LINE L1 251 5589 -297 3 648 8839 38 1 2 chrX 8338980 8339977 -158310319 + L1Md_T LINE L1 5590 6585 0 3 648 1225 135 11 11 chrX 8340331 8340518 -158309778 + B2_Mm2 SINE B2 1 187 -8 3 648 3942 46 50 0 chrX 8342371 8342830 -158307466 - LTRIS_Mm LTR ERV1 0 482 1 3 648 2646 298 31 39 chrX 8342830 8343938 -158306358 - RLTR6-int LTR ERV1 0 7778 6680 3 648 3125 103 7 18 chrX 8344716 8345153 -158305143 - MuRRS-int LTR ERV1 -237 4453 4022 3 648 287 139 0 0 chrX 8345156 8345199 -158305097 - MuRRS-int LTR ERV1 -3123 1567 1525 3 648 4877 136 50 34 chrX 8345198 8346730 -158303566 - MuRRS-int LTR ERV1 -3650 1413 1 3 648 4039 48 41 0 chrX 8346730 8347193 -158303103 - LTRIS_Mm LTR ERV1 0 482 1 3 648 22 0 0 0 chrX 8347939 8347961 -158302335 + AT_rich Low_complexity Low_complexity 1 22 0 3 648 3847 104 0 8 chrX 8348064 8348577 -158301719 - L1Md_F2 LINE L1 -19 6563 6055 3 648 1844 122 39 128 chrX 8348697 8349055 -158301241 + ORR1A2 LTR MaLR 1 326 -1 3 648 2889 174 16 27 chrX 8349059 8349704 -158300592 + ORR1A2-int LTR MaLR 4 647 -1145 3 648 385 258 82 0 chrX 8349620 8349717 -158300579 + MT2B LTR ERVL 161 265 -336 3 648 1633 114 0 0 chrX 8349740 8349976 -158300320 + ORR1A2 LTR MaLR 92 327 0 3 648 909 298 24 50 chrX 8349976 8350328 -158299968 - RLTR11A2 LTR ERVK -185 342 1 3 648 322 142 50 25 chrX 8350446 8350548 -158299748 - ORR1A4 LTR MaLR 0 384 274 3 648 9655 60 8 2 chrX 8350548 8352438 -158297858 - L1Md_F2 LINE L1 -53 6529 4629 3 648 920 211 2 31 chrX 8352438 8352634 -158297662 - ORR1B1 LTR MaLR -38 356 149 3 648 204 125 0 0 chrX 8352642 8352674 -158297622 + (GGGAGA)n Simple_repeat Simple_repeat 6 37 0 3 648 628 200 107 48 chrX 8352674 8352842 -158297454 - ORR1B1 LTR MaLR -198 180 3 3 648 1311 143 0 22 chrX 8353977 8354199 -158296097 - L1VL1 LINE L1 -6205 217 1 3 648 3638 111 9 0 chrX 8354201 8354734 -158295562 - L1Md_F2 LINE L1 -242 6340 5803 3 648 423 0 0 0 chrX 8354734 8354781 -158295515 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 3 648 4258 102 9 3 chrX 8354784 8355362 -158294934 - L1Md_F2 LINE L1 -12 6570 5990 3 648 22563 100 23 6 chrX 8355363 8359430 -158290866 - L1Md_F LINE L1 -1356 4527 390 3 648 5566 164 70 11 chrX 8359426 8360531 -158289765 - L1_Mur3 LINE L1 -1135 4745 3576 3 648 447 155 191 0 chrX 8360531 8360615 -158289681 - ORR1A2 LTR MaLR -136 191 92 3 648 2814 185 7 29 chrX 8360659 8361300 -158288996 - ORR1A2-int LTR MaLR -1153 639 4 3 648 405 111 0 0 chrX 8361303 8361357 -158288939 - ORR1A2 LTR MaLR 0 346 293 3 648 8033 95 4 0 chrX 8361357 8362453 -158287843 + L1Md_F2 LINE L1 4486 5585 -298 3 648 7519 99 1 4 chrX 8362454 8363476 -158286820 + L1Md_F2 LINE L1 5587 6582 0 3 648 5441 194 67 23 chrX 8363482 8365095 -158285201 + Lx7 LINE L1 4722 6420 -1276 3 648 472 125 67 9 chrX 8365524 8365629 -158284667 - Lx3_Mus LINE L1 -880 6129 6019 3 648 5834 111 39 9 chrX 8365629 8366473 -158283823 + Lx3_Mus LINE L1 6141 7009 0 3 648 294 261 21 52 chrX 8366579 8366676 -158283620 + RSINE1 SINE B4 2 95 -70 3 648 1082 177 0 0 chrX 8366868 8367066 -158283230 + Lx2B LINE L1 5888 6085 -915 3 648 5228 116 11 73 chrX 8367066 8367919 -158282377 - RLTR13B4 LTR ERVK 0 803 4 3 648 34178 115 37 51 chrX 8367940 8369641 -158280655 - ETnERV3-int LTR ERVK -24 5784 4011 3 648 369 0 0 0 chrX 8369641 8369682 -158280614 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 3 648 34178 115 37 51 chrX 8369682 8373846 -158276450 - ETnERV3-int LTR ERVK -1798 4010 5 3 648 5051 108 42 69 chrX 8373850 8374675 -158275621 - RLTR13B4 LTR ERVK 0 803 1 3 648 3780 206 18 8 chrX 8374675 8375442 -158274854 + Lx2B LINE L1 6080 6854 -146 3 648 4727 173 47 13 chrX 8375509 8376365 -158273931 + Lx4B LINE L1 6170 7054 -4 3 648 410 222 33 0 chrX 8376371 8376461 -158273835 - Lx9 LINE L1 -709 6935 6843 3 648 1014 153 51 11 chrX 8376476 8376654 -158273642 - B2_Mm2 SINE B2 -8 187 3 3 648 1664 282 55 39 chrX 8376680 8377396 -158272900 - L1_Rod LINE L1 -2730 3117 2391 3 648 568 218 8 16 chrX 8377404 8377530 -158272766 - L1_Rod LINE L1 -1738 4109 3985 3 648 21 0 0 0 chrX 8377560 8377581 -158272715 + AT_rich Low_complexity Low_complexity 1 21 0 3 648 2189 232 45 19 chrX 8379312 8379843 -158270453 - Lx5 LINE L1 0 7050 6506 3 648 498 228 31 54 chrX 8380184 8380314 -158269982 - B1F SINE Alu -7 142 16 3 648 270 322 97 11 chrX 8380370 8380546 -158269750 - L1MA5 LINE L1 -204 6096 5906 3 648 1202 139 11 0 chrX 8382466 8382653 -158267643 - B2_Mm1t SINE B2 -2 191 3 3 648 371 294 70 70 chrX 8383156 8383383 -158266913 - Lx8 LINE L1 -1 7472 7246 3 648 388 264 45 18 chrX 8384932 8385044 -158265252 + Lx8 LINE L1 7110 7224 -249 3 648 206 148 0 18 chrX 8386571 8386626 -158263670 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 3 648 481 254 110 27 chrX 8386925 8387071 -158263225 + RSINE1 SINE B4 8 165 0 3 648 237 304 120 52 chrX 8386929 8387120 -158263176 + B3 SINE B2 11 214 -2 3 648 318 194 16 0 chrX 8387609 8387671 -158262625 - ID4 SINE ID -9 74 12 3 648 256 311 149 37 chrX 8388252 8388359 -158261937 - B1F SINE Alu -24 125 7 3 1 1306 97 11 11 chrX 8388513 8388700 -158261596 + B2_Mm2 SINE B2 1 187 -8 3 649 3502 119 2 8 chrX 8391340 8391856 -158258440 - L1Md_F2 LINE L1 -15 6567 6055 3 649 1933 112 36 123 chrX 8391976 8392334 -158257962 + ORR1A2 LTR MaLR 1 327 0 3 649 2750 179 9 27 chrX 8392337 8392986 -158257310 + ORR1A2-int LTR MaLR 4 647 -1145 3 649 365 274 84 9 chrX 8392901 8393008 -158257288 + MT2B LTR ERVL 160 274 -327 3 649 1643 98 0 0 chrX 8393022 8393258 -158257038 + ORR1A2 LTR MaLR 92 327 0 3 649 710 303 27 44 chrX 8393258 8393608 -158256688 - RLTR11A2 LTR ERVK -183 344 1 3 649 979 201 10 25 chrX 8393730 8393934 -158256362 - ORR1B1 LTR MaLR -7 387 187 3 649 204 222 0 22 chrX 8393934 8393980 -158256316 + GA-rich Low_complexity Low_complexity 1 45 0 3 649 513 251 103 40 chrX 8393980 8394154 -158256142 - ORR1B1 LTR MaLR -191 187 3 3 649 1146 187 64 246 chrX 8395401 8395869 -158254427 - ORR1C2 LTR MaLR 0 384 2 3 649 805 206 159 0 chrX 8395870 8396084 -158254212 + L1_Mur3 LINE L1 2856 3103 -2777 3 649 35938 43 3 3 chrX 8396084 8401288 -158249008 + L1Md_T LINE L1 290 5589 -297 3 649 8524 36 0 0 chrX 8401288 8402283 -158248013 + L1Md_T LINE L1 5590 6584 -1 3 649 526 263 73 0 chrX 8402300 8402437 -158247859 - Lx8 LINE L1 -538 6935 6789 3 649 234 300 58 64 chrX 8402819 8402990 -158247306 + LTR65 LTR ERV1 497 666 -3 3 649 1297 92 11 11 chrX 8404947 8405134 -158245162 - B2_Mm2 SINE B2 -8 187 1 3 649 259 288 127 67 chrX 8405288 8405422 -158244874 + B1F SINE Alu 7 148 -1 3 649 229 197 32 16 chrX 8405987 8406049 -158244247 + ID4 SINE ID 12 74 -9 3 649 478 289 58 13 chrX 8406578 8406732 -158243564 - RSINE1 SINE B4 0 165 5 3 649 218 148 0 18 chrX 8406887 8406942 -158243354 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 3 649 411 264 45 18 chrX 8408474 8408586 -158241710 - Lx8 LINE L1 -249 7224 7110 3 649 1402 218 52 68 chrX 8409543 8409927 -158240369 - ORR1C1 LTR MaLR 0 378 1 3 649 13866 165 65 24 chrX 8409931 8410566 -158239730 + Lx7 LINE L1 2860 3530 -2350 3 649 669 244 112 16 chrX 8410566 8410753 -158239543 - B3 SINE B2 -7 209 5 3 649 1412 65 27 0 chrX 8410755 8410939 -158239357 - B2_Mm2 SINE B2 -5 190 2 3 649 13866 165 65 24 chrX 8410939 8412376 -158237920 + Lx7 LINE L1 3531 5014 -866 3 649 516 16 0 0 chrX 8412376 8412437 -158237859 + (GA)n Simple_repeat Simple_repeat 1 61 0 3 649 13866 191 76 25 chrX 8412437 8413753 -158236543 + Lx7 LINE L1 5015 6420 -1276 3 649 219 298 11 45 chrX 8414378 8414466 -158235830 + RSINE1 SINE B4 11 95 -70 3 649 4862 200 30 6 chrX 8414658 8415509 -158234787 + Lx2B LINE L1 5888 6753 -247 4 649 684 0 0 0 chrX 8415509 8415585 -158234711 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 4 649 4862 200 30 6 chrX 8415585 8415726 -158234570 + Lx2B LINE L1 6754 6903 -97 4 649 4556 188 17 11 chrX 8415752 8416636 -158233660 + Lx4B LINE L1 6170 7058 0 4 649 318 232 110 0 chrX 8416636 8416718 -158233578 - Lx9 LINE L1 -711 6933 6843 4 649 951 147 51 0 chrX 8416733 8416910 -158233386 - B2_Mm2 SINE B2 -8 187 2 4 649 1867 273 46 31 chrX 8416955 8417654 -158232642 - L1_Rod LINE L1 -2748 3099 2391 4 649 570 223 33 8 chrX 8417662 8417784 -158232512 - L1_Rod LINE L1 -1738 4109 3985 4 649 21 0 0 0 chrX 8417814 8417835 -158232461 + AT_rich Low_complexity Low_complexity 1 21 0 4 649 2273 239 47 19 chrX 8419554 8420084 -158230212 - Lx5 LINE L1 0 7050 6506 4 649 225 354 0 12 chrX 8420347 8420430 -158229866 - ID4_ SINE ID 0 83 2 4 649 399 244 30 61 chrX 8420438 8420569 -158229727 - B1F SINE Alu -7 142 16 4 649 228 350 68 0 chrX 8420625 8420802 -158229494 - L1MA5 LINE L1 -204 6096 5908 4 649 1379 77 22 0 chrX 8422732 8422914 -158227382 - B2_Mm2 SINE B2 -7 188 3 4 649 1483 309 88 15 chrX 8423560 8424162 -158226134 - Lx8 LINE L1 -158 7315 6670 4 649 267 294 38 38 chrX 8424693 8424824 -158225472 + B3 SINE B2 81 211 -5 4 649 391 259 61 18 chrX 8425618 8425732 -158224564 + Lx8 LINE L1 7114 7232 -241 4 649 228 185 0 18 chrX 8427229 8427284 -158223012 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 4 649 436 303 58 13 chrX 8427580 8427734 -158222562 + RSINE1 SINE B4 5 165 0 4 649 259 226 16 0 chrX 8428268 8428330 -158221966 - ID4 SINE ID -9 74 12 4 649 286 289 125 55 chrX 8428897 8429025 -158221271 - B1F1 SINE Alu -1 148 12 4 649 1191 118 16 11 chrX 8429186 8429374 -158220922 + B2_Mm2 SINE B2 1 189 -6 4 649 1708 172 69 21 chrX 8429723 8430102 -158220194 + RLTR44B LTR ERVK 1 397 -8 4 649 1317 121 210 4 chrX 8430114 8430371 -158219925 + RLTR44-int LTR ERVK 3 312 -2500 4 649 13868 53 75 77 chrX 8430992 8433027 -158217269 + RLTR44-int LTR ERVK 782 2812 0 4 649 2099 146 165 5 chrX 8433027 8433414 -158216882 + RLTR44B LTR ERVK 1 449 0 4 649 725 297 91 66 chrX 8435208 8435316 -158214980 + Lx8 LINE L1 6818 6920 -553 4 649 1040 107 0 0 chrX 8435316 8435456 -158214840 - B1_Mus2 SINE Alu -5 142 3 4 649 725 297 91 66 chrX 8435456 8435743 -158214553 + Lx8 LINE L1 6921 7223 -250 4 649 238 278 0 53 chrX 8435733 8435790 -158214506 + Lx8 LINE L1 7153 7206 -267 4 649 1998 99 36 123 chrX 8435944 8436302 -158213994 + ORR1A2 LTR MaLR 1 327 0 4 649 2773 189 15 25 chrX 8436305 8436955 -158213341 + ORR1A2-int LTR MaLR 4 647 -1145 4 649 1530 99 17 0 chrX 8436991 8437223 -158213073 + ORR1A2 LTR MaLR 92 327 0 4 649 611 296 23 86 chrX 8437223 8437500 -158212796 - RLTR11A2 LTR ERVK -183 344 88 4 649 2884 46 3 0 chrX 8437500 8437845 -158212451 - ORR1A0 LTR MaLR 0 346 1 4 649 13986 57 13 2 chrX 8437845 8439618 -158210678 - ORR1A0-int LTR MaLR 0 1792 1 4 649 2928 46 0 0 chrX 8439618 8439964 -158210332 - ORR1A0 LTR MaLR 0 346 1 4 649 611 218 25 53 chrX 8439964 8440052 -158210244 - RLTR11A2 LTR ERVK -440 87 1 4 649 1061 254 34 80 chrX 8440172 8440583 -158209713 - ORR1B1 LTR MaLR 0 394 3 4 649 1347 202 127 51 chrX 8441853 8442040 -158208256 - ORR1C2 LTR MaLR -2 382 189 4 649 369 0 0 0 chrX 8442040 8442081 -158208215 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 649 1347 202 127 51 chrX 8442081 8442248 -158208048 - ORR1C2 LTR MaLR -196 188 1 4 649 9663 160 68 31 chrX 8442248 8442891 -158207405 + Lx6 LINE L1 2856 3518 -2362 4 649 794 233 95 0 chrX 8442891 8443080 -158207216 - B3 SINE B2 -8 208 2 4 649 1387 79 26 0 chrX 8443081 8443270 -158207026 - B2_Mm2 SINE B2 0 195 2 4 649 9663 152 61 39 chrX 8443270 8444722 -158205574 + Lx6 LINE L1 3519 5035 -845 4 649 2195 243 123 38 chrX 8444719 8445243 -158205053 + Lx6 LINE L1 5617 6136 -1324 4 649 438 20 0 0 chrX 8445243 8445294 -158205002 + (TATG)n Simple_repeat Simple_repeat 1 51 0 4 649 2195 243 123 38 chrX 8445294 8445500 -158204796 + Lx6 LINE L1 6137 6408 -1052 4 649 257 268 0 14 chrX 8445850 8445922 -158204374 + L1MA5 LINE L1 5887 5957 -343 4 649 415 162 38 9 chrX 8445934 8446040 -158204256 - Lx3_Mus LINE L1 -880 6129 6021 4 649 5406 122 32 1 chrX 8446040 8446650 -158203646 + Lx3_Mus LINE L1 6139 6756 -253 4 649 261 42 20 41 chrX 8446650 8446699 -158203597 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 649 5406 122 32 1 chrX 8446699 8446925 -158203371 + Lx3_Mus LINE L1 6757 7000 -9 4 649 243 281 32 45 chrX 8447041 8447138 -158203158 + RSINE1 SINE B4 1 95 -70 4 649 5172 188 16 9 chrX 8447330 8448320 -158201976 + Lx2B LINE L1 5888 6884 -116 4 649 5149 161 12 11 chrX 8448365 8449249 -158201047 + Lx4B LINE L1 6170 7054 -4 4 649 499 167 33 0 chrX 8449257 8449347 -158200949 - Lx9 LINE L1 -709 6935 6843 4 649 1005 147 51 0 chrX 8449362 8449539 -158200757 - B2_Mm2 SINE B2 -8 187 2 4 649 1712 267 55 36 chrX 8449563 8450278 -158200018 - L1_Rod LINE L1 -2729 3118 2391 4 649 587 240 0 8 chrX 8450286 8450412 -158199884 - L1_Rod LINE L1 -1738 4109 3985 4 649 21 0 0 0 chrX 8450442 8450463 -158199833 + AT_rich Low_complexity Low_complexity 1 21 0 4 649 1223 105 22 0 chrX 8452470 8452651 -158197645 - B2_Mm1t SINE B2 -6 187 3 4 649 1509 297 86 37 chrX 8453149 8453855 -158196441 - Lx8 LINE L1 -1 7472 6732 4 649 267 294 38 38 chrX 8454428 8454559 -158195737 + B3 SINE B2 81 211 -5 4 649 2605 39 0 0 chrX 8455175 8455487 -158194809 - L1Md_F2 LINE L1 0 6582 6271 4 649 278 293 31 39 chrX 8456299 8456427 -158193869 - B3 SINE B2 -5 211 85 4 649 408 264 45 18 chrX 8456745 8456857 -158193439 + Lx8 LINE L1 7110 7224 -249 4 649 206 148 0 18 chrX 8458379 8458434 -158191862 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 4 649 542 263 58 13 chrX 8458729 8458883 -158191413 + RSINE1 SINE B4 5 165 0 4 649 226 242 16 0 chrX 8459421 8459483 -158190813 - ID4 SINE ID -9 74 12 4 649 256 311 113 0 chrX 8460070 8460176 -158190120 - B1F SINE Alu -20 129 12 4 649 1391 66 11 11 chrX 8460276 8460461 -158189835 + B2_Mm2 SINE B2 1 185 -10 4 649 248 288 58 70 chrX 8462418 8462590 -158187706 - LTR65 LTR ERV1 -3 666 497 4 649 869 298 83 60 chrX 8462960 8463108 -158187188 + Lx8 LINE L1 6778 6928 -545 4 649 957 150 0 0 chrX 8463108 8463248 -158187048 - B1_Mus2 SINE Alu -5 142 3 4 649 869 298 83 60 chrX 8463248 8463535 -158186761 + Lx8 LINE L1 6929 7223 -250 4 649 238 278 0 53 chrX 8463525 8463582 -158186714 + Lx8 LINE L1 7153 7206 -267 4 649 2038 79 60 126 chrX 8463736 8464085 -158186211 + ORR1A2 LTR MaLR 1 326 -1 4 649 10188 147 13 13 chrX 8464089 8465879 -158184417 + ORR1A2-int LTR MaLR 4 1792 0 4 649 2204 74 26 0 chrX 8465879 8466190 -158184106 + ORR1A2 LTR MaLR 1 319 -8 4 649 603 256 100 32 chrX 8466648 8466838 -158183458 + B3 SINE B2 3 205 -11 4 649 2443 161 18 18 chrX 8467284 8467443 -158182853 - ORR1B1-int LTR MaLR -226 1283 1126 4 649 495 0 0 0 chrX 8467443 8467498 -158182798 + (TC)n Simple_repeat Simple_repeat 1 55 0 4 649 2443 161 18 18 chrX 8467498 8467826 -158182470 - ORR1B1-int LTR MaLR -384 1125 797 4 649 5385 207 50 38 chrX 8467826 8469275 -158181021 + L1_Rod LINE L1 1566 3032 -2815 4 649 189 211 0 0 chrX 8469393 8469445 -158180851 + C-rich Low_complexity Low_complexity 1 52 0 4 649 22 0 0 0 chrX 8470014 8470036 -158180260 + GC_rich Low_complexity Low_complexity 1 22 0 4 649 22 0 0 0 chrX 8470094 8470116 -158180180 + GC_rich Low_complexity Low_complexity 1 22 0 4 649 278 263 6 46 chrX 8470125 8470300 -158179996 + (CCG)n Simple_repeat Simple_repeat 2 169 0 4 649 366 23 0 0 chrX 8470523 8470566 -158179730 + (CGG)n Simple_repeat Simple_repeat 3 45 0 4 649 820 123 33 33 chrX 8472197 8472348 -158177948 + URR1B DNA MER1_type 72 222 -3 4 649 5734 202 61 90 chrX 8472383 8473001 -158177295 + L1_Rod LINE L1 3025 3595 -2252 4 649 980 119 11 0 chrX 8473001 8473177 -158177119 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 4 649 5734 202 61 90 chrX 8473177 8473921 -158176375 + L1_Rod LINE L1 3596 4303 -1544 4 649 2381 86 9 0 chrX 8473921 8474245 -158176051 + ORR1A2 LTR MaLR 1 327 0 4 649 5734 202 61 90 chrX 8474245 8474782 -158175514 + L1_Rod LINE L1 4304 4870 -977 4 649 2625 205 96 33 chrX 8474770 8475437 -158174859 + Lx9 LINE L1 6174 6882 -762 4 649 540 0 0 0 chrX 8475475 8475535 -158174761 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 649 2149 192 7 5 chrX 8475546 8475904 -158174392 + Lx9 LINE L1 7137 7496 -148 4 649 363 44 0 0 chrX 8475904 8475949 -158174347 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 649 2149 192 7 5 chrX 8475949 8475993 -158174303 + Lx9 LINE L1 7497 7539 -105 4 649 2718 201 20 22 chrX 8476001 8476595 -158173701 + L1_Mur3 LINE L1 4029 4621 -1259 4 649 407 245 13 0 chrX 8476593 8476703 -158173593 - L1_Mur3 LINE L1 -2003 4137 4029 4 649 222 91 0 0 chrX 8476706 8476739 -158173557 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 649 995 186 36 0 chrX 8476742 8476935 -158173361 - Lx9 LINE L1 -142 7502 7303 4 649 1040 259 30 0 chrX 8476964 8477226 -158173070 + L1_Mur3 LINE L1 5583 5852 -28 4 649 899 337 48 14 chrX 8477214 8477656 -158172640 + Lx8 LINE L1 6624 7080 -393 4 649 202 121 30 0 chrX 8478587 8478620 -158171676 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 649 2108 82 18 59 chrX 8479996 8480334 -158169962 - ORR1A4 LTR MaLR -1 328 5 4 649 324 0 0 0 chrX 8480744 8480780 -158169516 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 649 666 235 58 40 chrX 8481803 8481976 -158168320 - Lx6 LINE L1 -48 7412 7237 4 649 602 325 57 20 chrX 8481964 8482212 -158168084 + Lx8 LINE L1 7085 7341 -132 4 649 834 168 0 0 chrX 8482229 8482372 -158167924 + B1_Mur4 SINE Alu 7 149 -1 4 649 33 56 0 0 chrX 8482438 8482492 -158167804 + AT_rich Low_complexity Low_complexity 1 54 0 4 649 248 285 56 16 chrX 8482785 8482910 -158167386 + L1MC LINE L1 4606 4735 -1411 4 649 372 309 15 7 chrX 8482978 8483097 -158167199 + B1F2 SINE Alu 11 129 -20 4 649 504 0 0 0 chrX 8483097 8483153 -158167143 + (TC)n Simple_repeat Simple_repeat 2 57 0 4 649 372 309 15 7 chrX 8483153 8483170 -158167126 + B1F2 SINE Alu 130 147 -2 4 649 255 261 15 12 chrX 8483187 8483272 -158167024 + PB1 SINE Alu 15 102 -25 4 649 2813 306 54 19 chrX 8483381 8484462 -158165834 - Lx8 LINE L1 -3 7470 6353 4 649 311 308 27 59 chrX 8484489 8484710 -158165586 + L1M4 LINE L1 4909 5122 -1024 4 649 229 267 86 0 chrX 8484835 8484951 -158165345 + L1MD LINE L1 5357 5482 -2513 4 649 1111 273 36 3 chrX 8484980 8485281 -158165015 - MTE2b LTR MaLR -68 311 1 4 649 447 256 16 71 chrX 8485335 8485723 -158164573 + ORR1E LTR MaLR 1 367 -12 4 649 686 359 29 13 chrX 8485727 8486103 -158164193 + ORR1E-int LTR MaLR 1 382 -1198 4 649 560 264 45 20 chrX 8486115 8486316 -158163980 + B4A SINE B4 1 206 -86 5 649 525 100 0 0 chrX 8486431 8486521 -158163775 + (GA)n Simple_repeat Simple_repeat 2 91 0 5 649 659 261 101 18 chrX 8487697 8487916 -158162380 - MTD LTR MaLR -182 237 1 5 649 1264 215 35 50 chrX 8488490 8488809 -158161487 - Lx6 LINE L1 -39 7421 7108 5 649 9212 140 56 8 chrX 8488808 8490488 -158159808 - Lx6 LINE L1 -1485 5975 4214 5 649 2731 194 87 14 chrX 8490490 8491185 -158159111 - Lx6 LINE L1 -3968 1912 1171 5 649 1371 77 33 0 chrX 8491185 8491367 -158158929 - B2_Mm2 SINE B2 -7 188 1 5 649 1572 216 20 61 chrX 8491367 8491626 -158158670 - Lx6 LINE L1 -6558 1170 922 5 649 2723 155 72 137 chrX 8493391 8494042 -158156254 - RMER19C LTR ERVK 0 611 3 5 649 355 230 172 0 chrX 8494241 8494328 -158155968 - RMER20A LTR ERVK 0 516 415 5 649 1426 76 0 0 chrX 8494787 8494971 -158155325 - L1_Mus1 LINE L1 0 6567 6384 5 649 2471 195 37 6 chrX 8495065 8495555 -158154741 + RLTR18B LTR ERVK 1 505 -7 5 649 438 20 0 0 chrX 8497982 8498033 -158152263 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 649 212 0 36 0 chrX 8499022 8499050 -158151246 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 5 649 242 342 0 24 chrX 8501219 8501342 -158148954 + CT-rich Low_complexity Low_complexity 2 121 0 1 649 2427 173 82 18 chrX 8501411 8501900 -158148396 - RMER1C Other Other -5 1337 818 2 649 499 259 0 17 chrX 8502147 8502265 -158148031 - RMER1B Other Other -352 714 599 2 649 365 320 8 0 chrX 8502292 8502414 -158147882 + B1_Mur2 SINE Alu 11 133 -16 3 649 660 111 0 0 chrX 8502423 8502522 -158147774 + (GAA)n Simple_repeat Simple_repeat 1 99 0 4 649 294 29 0 0 chrX 8502520 8502555 -158147741 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 649 246 303 29 29 chrX 8502575 8502677 -158147619 + PB1 SINE Alu 24 125 -2 6 649 268 306 103 11 chrX 8502780 8502965 -158147331 + L1MD LINE L1 4909 5110 -1036 7 649 229 338 14 0 chrX 8502999 8503070 -158147226 + tRNA-Ala-GCY_ tRNA tRNA 1 72 -3 8 649 627 265 57 0 chrX 8503238 8503520 -158146776 - MTE2b LTR MaLR -3 376 19 9 649 3093 160 45 13 chrX 8503622 8504237 -158146059 + RMER12 LTR ERVK 1 635 -687 1 649 428 228 42 140 chrX 8504248 8504462 -158145834 + RMER12 LTR ERVK 572 764 -558 1 649 1215 249 24 36 chrX 8504448 8504463 -158145833 + RMER12 LTR ERVK 993 1004 -318 1 649 503 43 14 0 chrX 8504463 8504533 -158145763 + (TG)n Simple_repeat Simple_repeat 1 71 0 1 649 1215 249 24 36 chrX 8504533 8504850 -158145446 + RMER12 LTR ERVK 1005 1321 -1 1 649 299 243 95 0 chrX 8504903 8504977 -158145319 + B1_Mur4 SINE Alu 38 118 -32 1 649 950 267 30 22 chrX 8505012 8505380 -158144916 - L1_Mur3 LINE L1 -1282 4598 4228 1 649 243 196 78 0 chrX 8505380 8505431 -158144865 - MTE2b LTR MaLR -324 55 1 9 649 527 298 106 44 chrX 8505570 8505844 -158144452 + B4A SINE B4 2 292 0 1 649 266 89 304 0 chrX 8506112 8506168 -158144128 + Lx2 LINE L1 6925 6997 0 1 649 479 312 52 39 chrX 8506216 8506621 -158143675 + L1M5 LINE L1 4317 4732 -1414 1 649 403 283 0 55 chrX 8506693 8506839 -158143457 + B1F2 SINE Alu 11 148 -1 1 649 44 20 0 0 chrX 8506956 8507007 -158143289 + AT_rich Low_complexity Low_complexity 1 51 0 1 649 3016 151 29 59 chrX 8507015 8507608 -158142688 - Lx4B LINE L1 -4 7054 6480 2 649 5435 91 16 11 chrX 8507608 8508597 -158141699 - L1_Mus3 LINE L1 -616 6022 5037 2 649 4352 67 5 16 chrX 8508601 8509179 -158141117 + L1_Mus3 LINE L1 6067 6638 0 2 649 702 142 9 0 chrX 8509185 8509298 -158140998 - Lx4B LINE L1 -569 6489 6376 2 649 288 0 0 0 chrX 8509325 8509357 -158140939 + (TAAAA)n Simple_repeat Simple_repeat 5 36 0 2 649 378 347 16 0 chrX 8509367 8509491 -158140805 + B1F2 SINE Alu 3 128 -21 2 649 1555 117 157 14 chrX 8509863 8509944 -158140352 - Lx LINE L1 -8 6646 6551 2 649 5564 47 0 5 chrX 8509944 8510614 -158139682 - L1Md_F2 LINE L1 0 6582 5916 2 649 1555 117 157 14 chrX 8510614 8510826 -158139470 - Lx LINE L1 -104 6550 6311 2 649 304 195 13 25 chrX 8510826 8510905 -158139391 + MTEb LTR MaLR 282 359 -20 2 649 849 313 119 3 chrX 8510937 8511264 -158139032 + MTEb-int LTR MaLR 18 382 -1198 2 649 263 286 172 8 chrX 8511334 8511468 -158138828 + B4A SINE B4 82 237 -55 2 649 1873 54 0 12 chrX 8513409 8513653 -158136643 + MusHAL1 LINE L1 2419 2659 -53 2 649 24 32 0 0 chrX 8514182 8514213 -158136083 + AT_rich Low_complexity Low_complexity 1 31 0 2 649 22 0 0 0 chrX 8514226 8514248 -158136048 + AT_rich Low_complexity Low_complexity 1 22 0 3 649 649 181 73 25 chrX 8514261 8514465 -158135831 - Lx9 LINE L1 0 7644 7431 3 649 946 53 122 0 chrX 8514467 8514598 -158135698 - B1_Mus2 SINE Alu 0 147 1 3 649 1194 97 80 0 chrX 8514598 8514772 -158135524 - B2_Mm2 SINE B2 -6 189 1 3 649 2355 182 44 49 chrX 8514792 8515369 -158134927 + RLTR20A2 LTR ERVK 13 508 -26 3 649 347 283 161 6 chrX 8515413 8515587 -158134709 - Lx8 LINE L1 -34 7439 7239 3 649 8463 16 0 1 chrX 8515786 8516740 -158133556 + L1Md_A LINE L1 4634 5586 -297 3 649 9002 13 0 0 chrX 8516740 8517736 -158132560 + L1Md_A LINE L1 5587 6582 0 3 649 348 164 0 0 chrX 8518719 8518786 -158131510 + CT-rich Low_complexity Low_complexity 3 69 0 3 81 1341 310 23 63 chrX 8519400 8519713 -158130583 - Lx8 LINE L1 -215 7258 6964 3 650 180 77 0 0 chrX 8519713 8519739 -158130557 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 650 1341 310 23 63 chrX 8519739 8519789 -158130507 - Lx8 LINE L1 -510 6963 6920 3 650 369 0 0 0 chrX 8519789 8519830 -158130466 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 650 1341 310 23 63 chrX 8519830 8520079 -158130217 - Lx8 LINE L1 -554 6919 6671 3 650 471 287 0 62 chrX 8520776 8520936 -158129360 + B3A SINE B2 1 150 -48 4 650 279 0 0 0 chrX 8520949 8520980 -158129316 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 4 650 793 177 6 58 chrX 8521885 8522041 -158128255 + B1_Mur3 SINE Alu 1 148 -1 4 650 25 95 0 0 chrX 8522100 8522174 -158128122 + AT_rich Low_complexity Low_complexity 1 74 0 4 650 459 0 0 0 chrX 8522746 8522797 -158127499 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 650 293 238 0 0 chrX 8523277 8523340 -158126956 - ID4 SINE ID -9 74 12 4 650 675 264 0 20 chrX 8523805 8523952 -158126344 + B1_Mur2 SINE Alu 1 144 -5 4 650 378 349 31 0 chrX 8524134 8524263 -158126033 - B1F SINE Alu -16 133 1 4 650 229 332 82 79 chrX 8524692 8524983 -158125313 - B4 SINE B4 0 292 1 4 650 449 249 106 30 chrX 8525072 8525271 -158125025 + B3 SINE B2 3 216 0 4 650 291 296 18 36 chrX 8525405 8525517 -158124779 + PB1 SINE Alu 1 110 -17 5 650 682 290 66 87 chrX 8526582 8526960 -158123336 - ORR1D2 LTR MaLR 0 370 1 5 650 412 264 159 0 chrX 8527121 8527284 -158123012 - LTR65 LTR ERV1 0 669 481 5 650 251 291 47 0 chrX 8527406 8527492 -158122804 - MER20 DNA MER1_type -33 186 97 5 650 242 347 82 0 chrX 8527748 8527846 -158122450 + B3 SINE B2 73 178 -38 5 650 284 163 0 0 chrX 8527853 8527902 -158122394 + ORR1A2 LTR MaLR 1 49 -278 5 650 970 85 23 41 chrX 8527901 8528072 -158122224 - B2_Mm2 SINE B2 -24 171 4 5 650 1428 129 4 28 chrX 8528073 8528320 -158121976 + ORR1A2 LTR MaLR 79 319 -8 5 650 1074 145 10 56 chrX 8528357 8528554 -158121742 + B2_Mm2 SINE B2 1 188 -7 5 650 10205 143 22 5 chrX 8528561 8530323 -158119973 + ORR1A2-int LTR MaLR 1 1792 0 5 650 2240 126 6 0 chrX 8530323 8530648 -158119648 + ORR1A2 LTR MaLR 1 327 0 5 650 22 35 0 0 chrX 8530659 8530688 -158119608 + AT_rich Low_complexity Low_complexity 1 29 0 5 650 423 0 0 0 chrX 8530821 8530868 -158119428 + (TTTTC)n Simple_repeat Simple_repeat 3 49 0 5 650 400 280 56 0 chrX 8530870 8530995 -158119301 + Lx8 LINE L1 6892 7023 -450 6 650 3903 182 49 28 chrX 8531766 8532894 -158117402 + L1_Mur2 LINE L1 884 2060 -3817 6 650 308 111 16 0 chrX 8532895 8532958 -158117338 + (TC)n Simple_repeat Simple_repeat 2 65 0 6 650 307 125 18 0 chrX 8532967 8533023 -158117273 + L1_Mur2 LINE L1 2066 2122 -3755 6 650 1997 165 10 8 chrX 8533026 8533411 -158116885 + L1_Mur2 LINE L1 3090 3475 -2402 6 650 447 19 0 0 chrX 8533943 8533995 -158116301 + (GCTG)n Simple_repeat Simple_repeat 2 53 0 6 650 2272 241 55 91 chrX 8534590 8535428 -158114868 + ORR1D2-int LTR MaLR 439 1246 -124 6 650 480 239 31 0 chrX 8535450 8535580 -158114716 - Lx4A LINE L1 -1 7057 6924 6 650 369 256 57 50 chrX 8535580 8535720 -158114576 + ORR1D2-int LTR MaLR 1229 1369 -1 6 650 663 293 141 9 chrX 8535721 8536048 -158114248 + ORR1D2 LTR MaLR 1 370 0 6 650 246 128 0 0 chrX 8537858 8537897 -158112399 + (A)n Simple_repeat Simple_repeat 1 39 0 6 650 253 121 22 98 chrX 8538808 8538900 -158111396 - Lx4B LINE L1 -4 7054 6970 6 650 529 285 0 58 chrX 8539037 8539227 -158111069 - ID_B1 SINE B4 -45 179 1 6 650 304 287 18 36 chrX 8541623 8541735 -158108561 + PB1 SINE Alu 1 110 -17 6 650 22656 91 7 4 chrX 8542938 8546940 -158103356 - L1Md_A LINE L1 -1707 4176 205 7 650 332 285 61 15 chrX 8546940 8547072 -158103224 + ORR1D2 LTR MaLR 233 370 0 7 650 21 0 0 0 chrX 8547245 8547266 -158103030 + AT_rich Low_complexity Low_complexity 1 21 0 7 650 713 57 11 0 chrX 8547511 8547599 -158102697 + L1Md_F2 LINE L1 5497 5585 -298 7 650 8017 52 1 1 chrX 8547600 8548628 -158101668 + L1Md_F2 LINE L1 5587 6582 0 7 650 450 0 0 0 chrX 8550134 8550184 -158100112 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 650 225 0 0 0 chrX 8550518 8550543 -158099753 + (TC)n Simple_repeat Simple_repeat 2 26 0 7 650 255 61 0 0 chrX 8550543 8550575 -158099721 + (TA)n Simple_repeat Simple_repeat 2 34 0 7 650 213 121 0 0 chrX 8551486 8551519 -158098777 + (A)n Simple_repeat Simple_repeat 1 33 0 7 650 445 298 6 56 chrX 8552633 8552811 -158097485 - ID_B1 SINE B4 -55 169 1 7 650 283 264 36 54 chrX 8555136 8555248 -158095048 + PB1 SINE Alu 1 110 -17 7 650 12922 22 0 1 chrX 8556467 8557945 -158092351 + L1Md_T LINE L1 4110 5586 -297 8 650 8532 36 0 0 chrX 8557945 8558941 -158091355 + L1Md_T LINE L1 5587 6582 0 8 650 252 0 0 0 chrX 8560327 8560355 -158089941 + (TG)n Simple_repeat Simple_repeat 2 29 0 8 650 279 0 0 0 chrX 8560689 8560720 -158089576 + (TC)n Simple_repeat Simple_repeat 2 32 0 8 650 402 21 0 0 chrX 8560720 8560766 -158089530 + (TA)n Simple_repeat Simple_repeat 2 48 0 8 650 255 130 24 83 chrX 8562574 8562658 -158087638 - Lx4B LINE L1 -4 7054 6976 8 650 529 285 0 58 chrX 8562803 8562993 -158087303 - ID_B1 SINE B4 -45 179 1 8 650 4698 219 49 14 chrX 8564850 8566094 -158084202 - ORR1C1-int LTR MaLR -221 1288 1 8 650 433 130 0 0 chrX 8566094 8566163 -158084133 - ORR1C1 LTR MaLR 0 378 310 8 650 378 309 28 9 chrX 8566326 8566484 -158083812 + MER5A1 DNA MER1_type 9 164 -2 8 650 482 0 17 0 chrX 8566489 8566547 -158083749 + (TTTTTG)n Simple_repeat Simple_repeat 2 60 0 8 650 898 142 0 0 chrX 8566974 8567115 -158083181 - B1_Mus1 SINE Alu 0 148 8 8 650 278 195 47 47 chrX 8567740 8567826 -158082470 - B3 SINE B2 0 216 131 9 650 322 203 17 0 chrX 8567981 8568040 -158082256 - PB1D9 SINE Alu -56 64 5 9 650 246 294 14 42 chrX 8568040 8568052 -158082244 - B4 SINE B4 -143 149 81 9 650 1918 236 41 6 chrX 8568067 8568886 -158081410 - L1_Mur3 LINE L1 -4185 1695 843 9 650 604 254 28 66 chrX 8568893 8569104 -158081192 - L1_Mur3 LINE L1 -7172 556 354 9 650 761 256 58 50 chrX 8569794 8570053 -158080243 - L1_Mur3 LINE L1 -7403 325 65 9 650 477 0 0 0 chrX 8571669 8571722 -158078574 + (TTCC)n Simple_repeat Simple_repeat 1 53 0 9 650 1025 131 6 0 chrX 8571722 8571898 -158078398 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 9 650 2294 128 0 0 chrX 8571914 8572241 -158078055 + ORR1A2 LTR MaLR 1 327 0 9 650 3215 226 22 45 chrX 8572301 8572894 -158077402 - Lx6 LINE L1 -1 7459 6879 9 650 425 62 15 0 chrX 8572894 8572959 -158077337 + (TG)n Simple_repeat Simple_repeat 1 66 0 9 650 3215 226 22 45 chrX 8572959 8573092 -158077204 - Lx6 LINE L1 -582 6878 6750 9 650 313 203 0 0 chrX 8573092 8573151 -158077145 + Lx6 LINE L1 6688 6746 -714 9 650 315 113 0 0 chrX 8574046 8574099 -158076197 + (T)n Simple_repeat Simple_repeat 1 53 0 9 650 909 108 7 0 chrX 8574099 8574238 -158076058 - B1_Mus2 SINE Alu 0 147 8 1 650 605 195 16 0 chrX 8574374 8574502 -158075794 - L1_Mur3 LINE L1 -6763 949 820 1 650 228 86 0 0 chrX 8574584 8574619 -158075677 + (T)n Simple_repeat Simple_repeat 1 35 0 1 650 39860 33 0 0 chrX 8574631 8580043 -158070253 - L1Md_T LINE L1 -1 6581 1170 1 650 5519 158 33 42 chrX 8580049 8581157 -158069139 - L1Md_T LINE L1 -5411 1205 108 1 650 1573 175 108 6 chrX 8581174 8581518 -158068778 + RMER19B LTR ERVK 524 902 0 1 650 207 0 0 0 chrX 8581536 8581559 -158068737 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 650 1130 95 0 0 chrX 8581563 8581710 -158068586 - B1_Mus1 SINE Alu 0 148 2 1 650 414 320 0 0 chrX 8581713 8581835 -158068461 - B3 SINE B2 -23 193 72 1 650 1147 314 70 14 chrX 8582206 8582632 -158067664 - Lx8 LINE L1 -250 7223 6774 1 650 243 287 47 54 chrX 8582848 8582977 -158067319 + MER20 DNA MER1_type 53 180 -39 1 650 263 309 53 20 chrX 8583087 8583239 -158067057 + LTR65 LTR ERV1 497 653 -16 1 650 4237 35 0 0 chrX 8584171 8584660 -158065636 - L1Md_T LINE L1 0 6582 6094 1 650 649 334 62 32 chrX 8584778 8585118 -158065178 - Lx7 LINE L1 -697 6999 6650 1 650 800 73 0 0 chrX 8585119 8585228 -158065068 - B1_Mus1 SINE Alu -39 109 1 1 650 370 342 126 0 chrX 8585228 8585450 -158064846 - Lx8 LINE L1 -806 6667 6418 1 650 4140 86 5 14 chrX 8585772 8586360 -158063936 - RLTR19-int LTR ERVK -4125 2012 1430 1 650 451 328 0 0 chrX 8586408 8586579 -158063717 + (CCA)n Simple_repeat Simple_repeat 1 171 0 1 650 183 156 0 0 chrX 8587228 8587260 -158063036 + (CGG)n Simple_repeat Simple_repeat 3 34 0 1 650 488 316 17 22 chrX 8587991 8588172 -158062124 + B3A SINE B2 1 180 -18 1 650 5905 87 28 1 chrX 8588796 8589618 -158060678 - Lx3_Mus LINE L1 0 7009 6166 1 650 22 56 0 0 chrX 8590842 8590878 -158059418 + AT_rich Low_complexity Low_complexity 1 36 0 1 650 24 0 0 0 chrX 8591379 8591403 -158058893 + AT_rich Low_complexity Low_complexity 1 24 0 1 650 378 0 0 0 chrX 8591603 8591645 -158058651 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 650 303 367 80 5 chrX 8593146 8593344 -158056952 - B4A SINE B4 -59 233 21 1 650 1618 180 60 52 chrX 8593344 8593708 -158056588 - ORR1B2 LTR MaLR 0 367 1 1 650 756 365 28 13 chrX 8593730 8594121 -158056175 - MTE-int LTR MaLR -1182 398 2 1 650 247 342 123 6 chrX 8594289 8594451 -158055845 - ORR1E LTR MaLR -177 182 2 1 650 4830 222 83 1 chrX 8594625 8595676 -158054620 - Lx6 LINE L1 -350 7110 5974 1 650 346 121 17 0 chrX 8595683 8595741 -158054555 - MTC LTR MaLR -362 59 1 1 650 905 172 7 0 chrX 8597158 8597303 -158052993 - B1_Mus1 SINE Alu 0 148 3 1 650 797 157 100 44 chrX 8597317 8597497 -158052799 - B2_Mm2 SINE B2 -5 190 1 1 650 4513 38 0 2 chrX 8598072 8598601 -158051695 - L1Md_F2 LINE L1 0 6582 6055 1 650 3605 152 33 22 chrX 8598776 8599420 -158050876 + Lx3B LINE L1 6319 6969 -4 1 650 26 0 0 0 chrX 8599420 8599446 -158050850 + AT_rich Low_complexity Low_complexity 1 26 0 1 650 420 111 0 0 chrX 8599473 8599536 -158050760 + (ATG)n Simple_repeat Simple_repeat 1 63 0 1 650 544 218 33 39 chrX 8599693 8599846 -158050450 - Lx6 LINE L1 -173 7287 7136 1 650 1286 127 5 0 chrX 8599846 8600035 -158050261 + B2_Mm2 SINE B2 1 190 -5 1 650 673 261 142 25 chrX 8600055 8600421 -158049875 + L1_Mur3 LINE L1 541 949 -6763 1 650 909 108 0 7 chrX 8600558 8600698 -158049598 + B1_Mus1 SINE Alu 10 148 0 1 650 231 133 0 0 chrX 8600701 8600746 -158049550 + (A)n Simple_repeat Simple_repeat 1 45 0 1 650 333 186 0 0 chrX 8601641 8601700 -158048596 - Lx6 LINE L1 -714 6746 6688 1 650 3039 229 23 68 chrX 8601700 8601833 -158048463 + Lx6 LINE L1 6750 6878 -582 1 650 438 20 0 0 chrX 8601833 8601884 -158048412 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 650 3039 229 23 68 chrX 8601884 8602494 -158047802 + Lx6 LINE L1 6879 7459 -1 1 650 2321 125 0 0 chrX 8602554 8602881 -158047415 - ORR1A2 LTR MaLR 0 327 1 1 650 772 176 0 12 chrX 8602895 8603062 -158047234 + GA-rich Low_complexity Low_complexity 1 165 0 1 650 761 256 58 50 chrX 8604677 8604936 -158045360 + L1_Mur3 LINE L1 65 325 -7403 1 650 623 249 28 66 chrX 8605397 8605608 -158044688 + L1_Mur3 LINE L1 354 556 -7172 1 650 1932 236 41 6 chrX 8605615 8606434 -158043862 + L1_Mur3 LINE L1 843 1695 -4185 1 650 246 294 14 42 chrX 8606449 8606461 -158043835 + B4 SINE B4 81 149 -143 1 650 322 203 17 0 chrX 8606461 8606520 -158043776 + PB1D9 SINE Alu 5 64 -56 1 650 278 195 47 47 chrX 8606675 8606761 -158043535 + B3 SINE B2 131 216 0 1 650 898 142 0 0 chrX 8607386 8607527 -158042769 + B1_Mus1 SINE Alu 8 148 0 1 650 374 0 22 0 chrX 8607952 8607998 -158042298 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 1 650 378 309 28 9 chrX 8608003 8608161 -158042135 - MER5A1 DNA MER1_type -2 164 9 1 650 433 130 0 0 chrX 8608324 8608393 -158041903 + ORR1C1 LTR MaLR 310 378 0 1 650 4661 221 49 14 chrX 8608393 8609637 -158040659 + ORR1C1-int LTR MaLR 1 1288 -221 1 650 520 291 0 58 chrX 8611491 8611681 -158038615 + ID_B1 SINE B4 1 179 -45 1 650 240 141 12 93 chrX 8611826 8611912 -158038384 + Lx4B LINE L1 6976 7054 -4 1 650 266 87 0 21 chrX 8613720 8613767 -158036529 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 650 414 0 0 0 chrX 8614018 8614064 -158036232 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 650 15491 26 0 0 chrX 8615451 8617924 -158032372 - L1Md_T LINE L1 0 6582 4110 1 650 283 264 36 54 chrX 8619143 8619255 -158031041 - PB1 SINE Alu -17 110 1 1 650 445 298 6 56 chrX 8621568 8621746 -158028550 + ID_B1 SINE B4 1 169 -55 1 650 186 43 0 0 chrX 8624521 8624544 -158025752 + (GGGTG)n Simple_repeat Simple_repeat 5 27 0 1 650 686 290 141 9 chrX 8624688 8625015 -158025281 - ORR1D2 LTR MaLR 0 370 1 1 650 405 241 57 50 chrX 8625016 8625156 -158025140 - ORR1D2-int LTR MaLR -1 1369 1229 1 650 512 223 31 0 chrX 8625156 8625286 -158025010 + Lx4A LINE L1 6924 7057 -1 1 650 2301 254 48 83 chrX 8625308 8626146 -158024150 - ORR1D2-int LTR MaLR -124 1246 439 1 650 195 42 0 0 chrX 8626741 8626765 -158023531 + (CAGC)n Simple_repeat Simple_repeat 2 25 0 1 650 2044 162 10 3 chrX 8627301 8627685 -158022611 - L1_Mur2 LINE L1 -2402 3475 3089 1 650 3962 191 15 30 chrX 8627687 8627745 -158022551 - L1_Mur2 LINE L1 -3755 2122 2064 1 650 637 63 21 0 chrX 8627745 8627840 -158022456 + (GA)n Simple_repeat Simple_repeat 1 97 0 1 650 3962 202 83 21 chrX 8627840 8628976 -158021320 - L1_Mur2 LINE L1 -3814 2063 895 1 650 331 312 58 0 chrX 8629694 8629832 -158020464 - Lx8 LINE L1 -439 7034 6889 1 650 201 74 0 0 chrX 8629832 8629859 -158020437 + (A)n Simple_repeat Simple_repeat 1 27 0 1 650 22 0 0 0 chrX 8629990 8630012 -158020284 + AT_rich Low_complexity Low_complexity 1 22 0 1 650 2110 110 3 0 chrX 8630039 8630357 -158019939 - ORR1A2 LTR MaLR -8 319 1 1 650 9991 148 22 5 chrX 8630357 8632119 -158018177 - ORR1A2-int LTR MaLR 0 1792 1 1 650 1011 172 11 21 chrX 8632123 8632161 -158018135 - B2_Mm2 SINE B2 -4 191 156 1 650 513 0 0 0 chrX 8632161 8632218 -158018078 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 650 1011 172 11 21 chrX 8632218 8632369 -158017927 - B2_Mm2 SINE B2 -40 155 4 1 650 1822 123 2 179 chrX 8632402 8632658 -158017638 - ORR1A2 LTR MaLR 0 327 82 1 650 985 127 28 34 chrX 8632658 8632837 -158017459 + B2_Mm2 SINE B2 4 181 -14 1 650 1089 76 7 0 chrX 8632845 8632989 -158017307 - B1_Mus2 SINE Alu -1 146 2 1 650 1822 123 2 179 chrX 8632989 8633120 -158017176 - ORR1A2 LTR MaLR -246 81 1 1 650 20607 21 0 0 chrX 8633177 8636208 -158014088 - L1Md_A LINE L1 0 6582 3552 1 650 244 270 54 0 chrX 8636517 8636591 -158013705 + MER20 DNA MER1_type 97 174 -45 1 650 375 270 159 0 chrX 8636727 8636890 -158013406 + LTR65 LTR ERV1 481 669 0 1 650 738 281 66 94 chrX 8637051 8637432 -158012864 + ORR1D2 LTR MaLR 1 370 0 1 650 226 336 18 36 chrX 8638499 8638610 -158011686 - PB1 SINE Alu -18 109 1 1 650 609 308 5 5 chrX 8641019 8641221 -158009075 + ID_B1 SINE B4 1 202 -22 1 650 225 265 12 12 chrX 8641369 8641453 -158008843 + Lx4B LINE L1 6971 7054 -4 1 650 660 287 88 5 chrX 8641550 8641767 -158008529 - ORR1D2 LTR MaLR -135 235 1 1 650 417 233 57 50 chrX 8641768 8641908 -158008388 - ORR1D2-int LTR MaLR -1 1369 1229 1 650 478 231 31 0 chrX 8641908 8642038 -158008258 + Lx4A LINE L1 6924 7057 -1 1 650 2330 253 48 83 chrX 8642060 8642898 -158007398 - ORR1D2-int LTR MaLR -124 1246 439 1 650 195 42 0 0 chrX 8643493 8643517 -158006779 + (CAGC)n Simple_repeat Simple_repeat 2 25 0 1 650 2044 162 10 3 chrX 8644053 8644437 -158005859 - L1_Mur2 LINE L1 -2402 3475 3089 1 650 3961 190 15 32 chrX 8644439 8644497 -158005799 - L1_Mur2 LINE L1 -3755 2122 2064 1 650 761 49 10 0 chrX 8644497 8644599 -158005697 + (GA)n Simple_repeat Simple_repeat 1 103 0 1 650 3961 202 45 31 chrX 8644599 8645737 -158004559 - L1_Mur2 LINE L1 -3814 2063 895 1 650 331 312 58 0 chrX 8646455 8646593 -158003703 - Lx8 LINE L1 -439 7034 6889 1 650 210 71 0 0 chrX 8646593 8646621 -158003675 + (A)n Simple_repeat Simple_repeat 1 28 0 1 650 22 0 0 0 chrX 8646752 8646774 -158003522 + AT_rich Low_complexity Low_complexity 1 22 0 1 650 2110 110 3 0 chrX 8646801 8647119 -158003177 - ORR1A2 LTR MaLR -8 319 1 1 650 9991 148 22 5 chrX 8647119 8648881 -158001415 - ORR1A2-int LTR MaLR 0 1792 1 1 650 1011 172 11 21 chrX 8648885 8648923 -158001373 - B2_Mm2 SINE B2 -4 191 156 1 650 495 0 0 0 chrX 8648923 8648978 -158001318 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 650 1011 172 11 21 chrX 8648978 8649129 -158001167 - B2_Mm2 SINE B2 -40 155 4 1 650 1822 123 2 179 chrX 8649162 8649418 -158000878 - ORR1A2 LTR MaLR 0 327 82 1 650 985 127 28 34 chrX 8649418 8649597 -158000699 + B2_Mm2 SINE B2 4 181 -14 1 650 1089 76 7 0 chrX 8649605 8649749 -158000547 - B1_Mus2 SINE Alu -1 146 2 1 650 1822 123 2 179 chrX 8649749 8649880 -158000416 - ORR1A2 LTR MaLR -246 81 1 1 81 20580 21 0 0 chrX 8649937 8652968 -157997328 - L1Md_A LINE L1 0 6582 3552 1 651 244 270 54 0 chrX 8653277 8653351 -157996945 + MER20 DNA MER1_type 97 174 -45 1 651 375 270 159 0 chrX 8653487 8653650 -157996646 + LTR65 LTR ERV1 481 669 0 1 651 738 281 66 94 chrX 8653811 8654192 -157996104 + ORR1D2 LTR MaLR 1 370 0 1 651 226 336 18 36 chrX 8655261 8655372 -157994924 - PB1 SINE Alu -18 109 1 1 651 432 303 5 58 chrX 8657897 8658086 -157992210 + ID_B1 SINE B4 1 179 -45 1 651 238 224 52 13 chrX 8658239 8658316 -157991980 + Lx4B LINE L1 6973 7052 -6 1 651 570 291 117 35 chrX 8658835 8659177 -157991119 - ORR1D2 LTR MaLR 0 370 1 1 651 471 187 9 55 chrX 8659178 8659304 -157990992 - ORR1D2-int LTR MaLR -1 1508 1263 1 651 443 277 43 0 chrX 8659304 8659445 -157990851 + Lx4A LINE L1 6911 7057 -1 1 651 2670 249 59 140 chrX 8659457 8660711 -157989585 - ORR1D2-int LTR MaLR -112 1258 107 1 651 6011 102 7 4 chrX 8661535 8662330 -157987966 + L1VL4 LINE L1 206 1001 -2558 2 651 6510 48 8 33 chrX 8662330 8663173 -157987123 + RLTR13B2 LTR ERVK 1 822 0 2 651 6011 82 24 14 chrX 8663173 8663932 -157986364 + L1VL4 LINE L1 1002 1770 -1789 2 651 6112 125 28 5 chrX 8664217 8665862 -157984434 + L1Md_F LINE L1 442 2125 -3758 2 651 3083 26 0 0 chrX 8665862 8666208 -157984088 + ORR1A0 LTR MaLR 1 346 0 2 651 13845 58 12 5 chrX 8666208 8667988 -157982308 + ORR1A0-int LTR MaLR 1 1792 0 2 651 2984 29 0 3 chrX 8667988 8668335 -157981961 + ORR1A0 LTR MaLR 1 346 0 2 651 23474 106 16 1 chrX 8668337 8672008 -157978288 + L1Md_F LINE L1 2123 5849 -34 2 651 4459 151 50 30 chrX 8672008 8672885 -157977411 - RLTR13D6 LTR ERVK -56 846 1 2 651 7901 150 42 62 chrX 8672895 8674560 -157975736 - RLTR45-int LTR ERVK -1173 6071 4143 2 651 192 40 0 0 chrX 8674560 8674585 -157975711 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 2 651 7901 122 28 56 chrX 8674585 8674861 -157975435 - RLTR45-int LTR ERVK -2348 4896 4597 2 651 5501 50 21 15 chrX 8674873 8675587 -157974709 + L1_Mus1 LINE L1 5850 6567 0 2 651 313 212 67 56 chrX 8675918 8676008 -157974288 + L1M2 LINE L1 2745 2835 -3308 2 651 855 264 14 5 chrX 8676038 8676251 -157974045 + B3 SINE B2 2 216 0 2 651 2329 68 3 6 chrX 8676412 8676739 -157973557 - Lx2 LINE L1 -247 6750 6425 2 651 547 333 97 82 chrX 8676928 8677462 -157972834 - MLT1F LTR MaLR -5 543 2 2 651 21 0 0 0 chrX 8677829 8677850 -157972446 + AT_rich Low_complexity Low_complexity 1 21 0 2 651 1601 229 88 3 chrX 8677979 8678343 -157971953 - MTD LTR MaLR -2 417 23 2 651 306 0 0 0 chrX 8679820 8679854 -157970442 + (TAA)n Simple_repeat Simple_repeat 3 36 0 2 651 3198 31 39 0 chrX 8679930 8680311 -157969985 - MTA_Mm LTR MaLR 0 396 1 2 651 387 248 14 0 chrX 8680390 8680472 -157969824 + MTE-int LTR MaLR 960 1042 -467 2 651 2144 284 129 21 chrX 8680478 8681425 -157968871 - Lx9 LINE L1 -239 7405 6357 2 651 279 54 0 0 chrX 8681429 8681466 -157968830 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 651 209 209 0 0 chrX 8681728 8681771 -157968525 + (CAGAGA)n Simple_repeat Simple_repeat 3 45 0 2 651 21 0 0 0 chrX 8682467 8682488 -157967808 + AT_rich Low_complexity Low_complexity 1 21 0 2 651 21 36 0 0 chrX 8683878 8683906 -157966390 + AT_rich Low_complexity Low_complexity 1 28 0 2 651 767 223 0 0 chrX 8684759 8684889 -157965407 + B3 SINE B2 1 130 -86 2 651 450 120 0 0 chrX 8686107 8686182 -157964114 + (TATG)n Simple_repeat Simple_repeat 4 78 0 2 651 629 300 0 7 chrX 8686182 8686333 -157963963 - B3A SINE B2 -43 155 6 2 651 818 105 0 0 chrX 8687898 8688012 -157962284 + B1_Mus1 SINE Alu 35 148 0 2 651 455 0 0 18 chrX 8688878 8688934 -157961362 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 2 651 1165 37 0 0 chrX 8688934 8689068 -157961228 - B1_Mm SINE Alu -13 134 1 2 651 533 308 75 61 chrX 8689074 8689502 -157960794 - L1MB7 LINE L1 -16 6168 5735 2 651 228 280 0 0 chrX 8689765 8689815 -157960481 + C-rich Low_complexity Low_complexity 4 53 0 2 651 231 36 0 0 chrX 8689815 8689843 -157960453 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 651 390 260 192 0 chrX 8689844 8689990 -157960306 - B3A SINE B2 -14 184 11 2 651 303 218 149 6 chrX 8690009 8690141 -157960155 - L1MB7 LINE L1 -685 5479 5331 2 651 294 294 15 0 chrX 8690179 8690247 -157960049 - AluF_3 SINE Alu -103 208 140 2 651 388 270 89 9 chrX 8690250 8690463 -157959833 - L1MB7 LINE L1 -813 5333 5104 2 651 203 0 37 0 chrX 8690962 8690989 -157959307 + (CAT)n Simple_repeat Simple_repeat 2 29 0 2 651 371 267 219 13 chrX 8691664 8691988 -157958308 - L1MB7 LINE L1 -1388 4758 4369 2 651 1932 234 96 6 chrX 8692002 8692491 -157957805 - Lx6 LINE L1 -16 7444 6912 2 651 504 0 0 0 chrX 8692491 8692547 -157957749 + (TC)n Simple_repeat Simple_repeat 1 56 0 2 651 360 0 0 0 chrX 8692547 8692586 -157957710 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 651 285 143 0 0 chrX 8692586 8692637 -157957659 - L1M5 LINE L1 -729 5442 5392 2 651 716 330 29 7 chrX 8692632 8692940 -157957356 - L1_Mur3 LINE L1 -7298 414 100 2 651 491 264 49 18 chrX 8692927 8693151 -157957145 - L1MB7 LINE L1 -1763 4383 4153 2 651 269 296 23 0 chrX 8693181 8693269 -157957027 - L1MB7 LINE L1 -1977 4169 4080 2 651 195 69 0 0 chrX 8693272 8693301 -157956995 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 651 327 322 100 7 chrX 8693302 8693452 -157956844 - L1MB7 LINE L1 -2057 4089 3926 2 651 24 67 0 0 chrX 8693770 8693815 -157956481 + AT_rich Low_complexity Low_complexity 1 45 0 2 651 579 298 11 37 chrX 8693826 8694014 -157956282 - B3A SINE B2 -15 183 1 2 651 719 169 14 0 chrX 8694357 8694499 -157955797 + CT-rich Low_complexity Low_complexity 3 146 0 2 651 556 282 25 21 chrX 8694512 8694815 -157955481 + MLT2D LTR ERVL 1 367 -47 2 651 621 318 6 40 chrX 8695727 8695904 -157954392 - ID_B1 SINE B4 -7 217 47 2 651 4207 201 55 1 chrX 8695976 8696817 -157953479 - Lx5 LINE L1 -7 7043 6158 2 651 520 294 53 96 chrX 8696860 8697161 -157953135 - ORR1A3-int LTR MaLR -570 1393 1106 2 651 1211 238 100 14 chrX 8697245 8697535 -157952761 - MTD LTR MaLR -83 336 22 2 651 318 285 16 24 chrX 8697946 8698072 -157952224 - L1M LINE L1 -758 5426 5302 2 651 348 298 36 51 chrX 8698092 8698230 -157952066 - B1F SINE Alu -13 136 1 2 651 565 295 54 97 chrX 8698394 8698878 -157951418 + Lx9 LINE L1 7154 7616 -28 2 651 181 229 115 0 chrX 8699331 8699392 -157950904 + L3 LINE CR1 4413 4480 -9 2 651 201 74 0 0 chrX 8701330 8701357 -157948939 + (GGATG)n Simple_repeat Simple_repeat 2 28 0 2 651 1272 70 0 0 chrX 8701721 8701965 -157948331 + (TAGA)n Simple_repeat Simple_repeat 1 244 0 2 651 1257 231 113 67 chrX 8702621 8703011 -157947285 + MTD LTR MaLR 1 408 -11 2 651 745 187 7 7 chrX 8703256 8703396 -157946900 + B1_Mur2 SINE Alu 1 140 -9 2 651 339 279 98 39 chrX 8704652 8704906 -157945390 + Lx9 LINE L1 7323 7591 -53 2 651 22 0 0 0 chrX 8704934 8704956 -157945340 + AT_rich Low_complexity Low_complexity 1 22 0 2 651 305 109 16 0 chrX 8705430 8705494 -157944802 + (TTTTTG)n Simple_repeat Simple_repeat 2 66 0 2 651 480 77 0 0 chrX 8706601 8706666 -157943630 + (TA)n Simple_repeat Simple_repeat 2 66 0 2 651 392 363 12 25 chrX 8706769 8706930 -157943366 + B3A SINE B2 37 195 -3 2 651 27 0 0 0 chrX 8706946 8706973 -157943323 + AT_rich Low_complexity Low_complexity 1 27 0 2 651 545 252 52 13 chrX 8707612 8707765 -157942531 - MER58A DNA MER1_type -16 208 50 2 651 740 221 105 25 chrX 8707777 8707977 -157942319 + B3 SINE B2 1 216 0 2 651 525 135 0 0 chrX 8708086 8708175 -157942121 + (TG)n Simple_repeat Simple_repeat 1 89 0 2 651 341 345 26 8 chrX 8708202 8708319 -157941977 - PB1D7 SINE Alu -1 119 1 2 651 411 295 22 15 chrX 8708721 8708855 -157941441 + LTR16A1 LTR ERVL 3 137 -319 2 651 555 90 0 0 chrX 8709447 8709525 -157940771 + (CA)n Simple_repeat Simple_repeat 1 78 0 2 651 264 180 40 0 chrX 8710112 8710162 -157940134 + B1F SINE Alu 92 143 -6 2 651 373 385 74 15 chrX 8710391 8710594 -157939702 - MER58A DNA MER1_type -1 223 9 2 651 348 319 35 9 chrX 8710739 8710853 -157939443 - LTR16C LTR ERVL -2 487 371 2 651 504 0 0 0 chrX 8710982 8711038 -157939258 + (GA)n Simple_repeat Simple_repeat 2 57 0 2 651 252 304 110 16 chrX 8711047 8711174 -157939122 - LTR16C LTR ERVL -350 139 1 2 651 397 275 2 31 chrX 8711358 8711470 -157938826 + B3 SINE B2 76 176 -22 2 651 753 289 0 12 chrX 8711676 8711837 -157938459 + RSINE1 SINE B4 5 163 -2 2 651 423 0 0 0 chrX 8712416 8712463 -157937833 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 651 6562 63 15 0 chrX 8712599 8713484 -157936812 + L1_Mus1 LINE L1 5649 6546 -21 2 651 2023 20 60 16 chrX 8713484 8713732 -157936564 + L1Md_F2 LINE L1 6310 6568 -14 2 651 318 369 67 22 chrX 8713826 8714006 -157936290 + LTR16B1 LTR ERVL 285 472 -8 2 651 513 0 0 0 chrX 8714020 8714077 -157936219 + (TC)n Simple_repeat Simple_repeat 1 57 0 2 651 393 86 0 0 chrX 8714078 8714136 -157936160 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 651 3762 69 0 14 chrX 8714541 8715039 -157935257 - L1Md_F2 LINE L1 0 6582 6092 2 651 468 212 65 29 chrX 8715614 8715784 -157934512 - RLTR42-int LTR ERVK -1090 4432 4257 2 651 541 280 163 55 chrX 8716252 8716509 -157933787 + MLT1A0 LTR MaLR 57 341 -24 2 651 363 177 136 8 chrX 8716579 8716704 -157933592 + Lx4A LINE L1 6917 7057 -1 2 651 434 291 0 30 chrX 8717656 8717787 -157932509 - ID_B1 SINE B4 0 224 98 2 651 455 299 33 49 chrX 8718334 8718564 -157931732 + L1MC4 LINE L1 7341 7574 -468 2 651 1193 94 0 16 chrX 8718564 8718747 -157931549 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 2 651 455 299 33 49 chrX 8718747 8718822 -157931474 + L1MC4 LINE L1 7575 7641 -401 2 651 2357 60 0 9 chrX 8719186 8719503 -157930793 - L1_Mus2 LINE L1 -1 6565 6252 2 651 376 288 0 41 chrX 8719540 8719663 -157930633 - Lx8 LINE L1 -243 7230 7113 2 651 564 258 115 16 chrX 8719694 8719938 -157930358 - Lx8 LINE L1 -473 7000 6733 2 651 259 220 11 11 chrX 8720059 8720151 -157930145 + CT-rich Low_complexity Low_complexity 2 93 0 2 651 242 165 39 47 chrX 8720506 8720633 -157929663 + CT-rich Low_complexity Low_complexity 5 130 0 2 651 331 171 34 41 chrX 8720657 8720803 -157929493 + CT-rich Low_complexity Low_complexity 2 146 0 2 651 316 294 48 48 chrX 8720819 8720944 -157929352 - HAL1-3A_ME LINE L1 -68 2790 2666 2 651 867 127 0 0 chrX 8720968 8721141 -157929155 + (TC)n Simple_repeat Simple_repeat 2 174 0 2 651 4198 34 2 0 chrX 8721665 8722160 -157928136 + L1Md_F2 LINE L1 6085 6580 -2 2 651 252 284 143 25 chrX 8722633 8722752 -157927544 + RMER17C LTR ERVK 278 410 0 2 651 612 241 35 0 chrX 8722752 8722893 -157927403 - Lx8 LINE L1 -742 6731 6586 2 651 220 277 0 0 chrX 8722937 8722984 -157927312 - B1F1 SINE Alu -102 47 1 2 651 2327 104 51 19 chrX 8723080 8723452 -157926844 + Lx3A LINE L1 6592 6975 -6 2 651 22 0 0 0 chrX 8723613 8723635 -157926661 + AT_rich Low_complexity Low_complexity 1 22 0 2 651 230 320 24 34 chrX 8724757 8724881 -157925415 + MIRc SINE MIR 60 182 -94 2 651 379 345 159 0 chrX 8724985 8725205 -157925091 + HAL1 LINE L1 36 290 -2217 2 651 1761 232 191 27 chrX 8725307 8725940 -157924356 - RMER19A LTR ERVK 0 737 1 2 651 551 361 24 46 chrX 8726114 8726442 -157923854 + HAL1 LINE L1 700 1020 -1487 2 651 676 283 92 64 chrX 8726479 8726762 -157923534 + B4A SINE B4 2 292 0 3 651 338 204 11 0 chrX 8726762 8726855 -157923441 + (CA)n Simple_repeat Simple_repeat 1 94 0 3 651 592 295 67 28 chrX 8726966 8727325 -157922971 + HAL1 LINE L1 1375 1747 -760 2 651 2315 93 30 25 chrX 8727681 8727729 -157922567 + Lx3_Mus LINE L1 5521 5560 -326 3 651 1571 66 52 0 chrX 8727729 8727940 -157922356 - L1_Mus2 LINE L1 0 6566 6345 3 651 9577 67 31 17 chrX 8727940 8729367 -157920929 + Lx3_Mus LINE L1 5561 7004 -5 3 651 4775 99 29 0 chrX 8729583 8730242 -157920054 + RLTR33 LTR ERVK 1 678 0 3 651 27 0 0 0 chrX 8730266 8730293 -157920003 + AT_rich Low_complexity Low_complexity 1 27 0 3 651 192 135 0 0 chrX 8730304 8730341 -157919955 + (TAA)n Simple_repeat Simple_repeat 2 38 0 3 651 354 321 74 35 chrX 8730374 8730603 -157919693 + L1MC5 LINE L1 7001 7238 -723 3 651 466 323 83 66 chrX 8730648 8731118 -157919178 + L1M5 LINE L1 4856 5333 -813 3 651 464 353 50 84 chrX 8731317 8731357 -157918939 - B4 SINE B4 0 292 270 3 651 288 0 0 0 chrX 8731357 8731389 -157918907 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 651 464 353 50 84 chrX 8731389 8731645 -157918651 - B4 SINE B4 -23 269 6 3 651 261 362 28 9 chrX 8731665 8731771 -157918525 + MLT1A0 LTR MaLR 20 127 -238 3 651 22 56 0 0 chrX 8732142 8732178 -157918118 + AT_rich Low_complexity Low_complexity 1 36 0 3 651 240 184 0 0 chrX 8733138 8733176 -157917120 + tRNA-Gly-GGA tRNA tRNA 1 38 -37 3 651 7150 66 19 1 chrX 8733548 8734711 -157915585 - L1_Mus1 LINE L1 0 6567 5384 3 651 377 364 23 23 chrX 8734804 8734981 -157915315 + MER5B DNA MER1_type 2 178 0 3 651 425 360 27 0 chrX 8735000 8735147 -157915149 + MER5A1 DNA MER1_type 15 165 -1 3 651 255 323 0 0 chrX 8735552 8735617 -157914679 - tRNA-Ala-GCA tRNA tRNA -8 67 3 3 651 1099 69 14 0 chrX 8736015 8736160 -157914136 + B1_Mus1 SINE Alu 2 148 0 3 651 246 32 0 0 chrX 8736160 8736191 -157914105 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 3 651 860 204 155 0 chrX 8736234 8736518 -157913778 + L1_Mur3 LINE L1 297 624 -7104 3 651 244 267 185 22 chrX 8736543 8736635 -157913661 - RMER17C LTR ERVK -69 341 235 3 651 2095 121 58 16 chrX 8736638 8737001 -157913295 - RMER10B LTR ERVL 0 398 21 3 651 276 30 0 0 chrX 8737027 8737060 -157913236 + (GGGGA)n Simple_repeat Simple_repeat 2 34 0 3 651 4038 152 39 10 chrX 8737159 8738219 -157912077 + L1_Mur3 LINE L1 450 1545 -4335 3 651 2076 193 24 20 chrX 8738213 8738720 -157911576 + L1_Mur3 LINE L1 4721 5229 -651 3 651 209 305 0 48 chrX 8739277 8739339 -157910957 - MER5A DNA MER1_type -26 163 105 3 651 333 368 22 49 chrX 8740131 8740354 -157909942 + L3 LINE CR1 2080 2296 -2193 3 651 6854 131 1 4 chrX 8741034 8742173 -157908123 - L1_Mm LINE L1 -1024 4859 3725 3 651 3990 142 16 8 chrX 8742166 8743114 -157907182 - L1VL4 LINE L1 -2428 1131 175 3 651 334 356 24 41 chrX 8743209 8743379 -157906917 - MLT1N2 LTR MaLR -28 534 368 3 651 1146 213 57 13 chrX 8743505 8743808 -157906488 + ORR1C1 LTR MaLR 1 378 0 3 651 6060 189 67 9 chrX 8743808 8745235 -157905061 + ORR1C1-int LTR MaLR 1 1509 0 3 651 735 191 14 0 chrX 8745236 8745377 -157904919 + ORR1C1 LTR MaLR 2 144 -234 3 651 231 314 0 0 chrX 8745383 8745453 -157904843 - L1M4c LINE L1 -1759 5241 5172 3 651 7901 46 0 0 chrX 8745465 8746629 -157903667 - L1Md_F2 LINE L1 -3 6579 5416 3 651 1778 106 0 8 chrX 8746730 8746996 -157903300 - Lx2 LINE L1 -513 6484 6221 3 651 3073 93 4 28 chrX 8746994 8747467 -157902829 + Lx2 LINE L1 6462 6923 -74 3 651 389 271 116 23 chrX 8747465 8747604 -157902692 - L1M4c LINE L1 -2275 4725 4577 3 651 249 33 0 0 chrX 8747604 8747634 -157902662 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 651 389 271 116 23 chrX 8747634 8747709 -157902587 - L1M4c LINE L1 -2424 4576 4491 3 651 522 337 101 38 chrX 8747732 8748068 -157902228 - ORR1E LTR MaLR -1 378 1 3 651 313 188 0 24 chrX 8748148 8748230 -157902066 + Ricksha_c DNA MuDR 22 101 -1947 3 651 768 310 19 4 chrX 8748477 8748733 -157901563 + Ricksha_c DNA MuDR 1404 1663 -385 3 651 1483 291 69 2 chrX 8748956 8749407 -157900889 + Lx5 LINE L1 6550 7030 -20 3 651 257 242 88 29 chrX 8749640 8749742 -157900554 - Ricksha_c DNA MuDR -1934 114 7 3 651 1004 205 43 34 chrX 8749749 8749932 -157900364 - L1M4c LINE L1 -2594 4406 4223 3 651 2101 101 119 34 chrX 8749932 8750311 -157899985 - RLTR10A LTR ERVK 0 411 1 3 651 1004 229 54 35 chrX 8750311 8750550 -157899746 - L1M4c LINE L1 -2778 4228 3976 3 651 251 361 142 47 chrX 8750551 8750589 -157899707 - B4 SINE B4 -32 260 171 3 651 386 296 34 77 chrX 8750589 8750706 -157899590 - PB1D10 SINE Alu -5 112 1 3 651 251 361 142 47 chrX 8750706 8750763 -157899533 - B4 SINE B4 -32 170 29 3 651 867 279 115 20 chrX 8750802 8751835 -157898461 - L1M4c LINE L1 -3158 3848 2702 3 651 406 305 74 51 chrX 8751941 8752264 -157898032 - L1M4c LINE L1 -4511 2497 2221 3 651 307 294 34 45 chrX 8752244 8752333 -157897963 - L1M4c LINE L1 -5090 1918 1831 3 651 1226 217 56 4 chrX 8752825 8753118 -157897178 - RMER19A LTR ERVK 0 737 375 3 651 559 282 79 5 chrX 8753131 8753334 -157896962 - Lx9 LINE L1 -457 7187 6970 3 651 354 294 21 32 chrX 8753357 8753547 -157896749 - L1M3d LINE L1 -4676 1215 1028 3 651 23 33 0 0 chrX 8753550 8753580 -157896716 + AT_rich Low_complexity Low_complexity 1 30 0 3 651 227 358 32 24 chrX 8753736 8753862 -157896434 - L1M3d LINE L1 -5091 800 674 3 651 538 239 0 9 chrX 8754663 8754777 -157895519 - PB1D9 SINE Alu -7 113 1 3 651 1801 82 0 0 chrX 8755171 8755403 -157894893 + L1_Mus1 LINE L1 6336 6567 0 3 651 221 94 75 0 chrX 8755754 8755807 -157894489 + (TA)n Simple_repeat Simple_repeat 2 58 0 3 651 222 176 0 0 chrX 8756010 8756061 -157894235 + CT-rich Low_complexity Low_complexity 1 51 0 3 651 344 317 40 16 chrX 8756692 8756817 -157893479 - MIR SINE MIR -76 186 59 3 651 306 331 16 68 chrX 8756817 8757008 -157893288 - B3A SINE B2 -16 182 2 3 651 496 267 76 0 chrX 8757258 8757389 -157892907 + B1_Mur1 SINE Alu 2 142 -7 3 651 343 366 81 0 chrX 8757500 8757661 -157892635 - MLT1K LTR MaLR -114 481 308 3 651 442 31 15 15 chrX 8757731 8757796 -157892500 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 651 28 0 0 0 chrX 8758044 8758072 -157892224 + AT_rich Low_complexity Low_complexity 1 28 0 3 651 471 320 137 35 chrX 8758092 8758406 -157891890 - RLTR23 LTR ERV1 0 430 85 3 651 331 209 15 15 chrX 8758487 8758555 -157891741 - RLTR23 LTR ERV1 -330 100 33 3 651 1109 219 102 17 chrX 8759017 8759378 -157890918 + MTD LTR MaLR 1 419 0 3 651 1153 82 0 0 chrX 8759877 8760023 -157890273 - B1_Mm SINE Alu 0 147 2 3 651 309 261 32 21 chrX 8760274 8760368 -157889928 - MTEb LTR MaLR -4 375 281 3 651 398 259 140 47 chrX 8761182 8761332 -157888964 + RSINE1 SINE B4 2 165 0 3 651 609 224 118 7 chrX 8761366 8761501 -157888795 - MTD LTR MaLR -14 405 256 3 651 577 85 12 0 chrX 8761504 8761586 -157888710 + RMER19B LTR ERVK 818 900 -2 3 651 275 366 78 0 chrX 8761684 8761826 -157888470 - L2 LINE L2 -399 3020 2868 3 651 2230 146 45 16 chrX 8761878 8762260 -157888036 + MTB_Mm LTR MaLR 1 393 -14 3 651 270 0 0 0 chrX 8763200 8763230 -157887066 + (TTA)n Simple_repeat Simple_repeat 1 30 0 3 651 216 0 0 0 chrX 8763230 8763254 -157887042 + (TAG)n Simple_repeat Simple_repeat 3 26 0 3 651 548 299 111 44 chrX 8764267 8764610 -157885686 - RLTR42-int LTR ERVK -2791 2731 2366 3 651 8031 84 36 7 chrX 8765025 8766942 -157883354 + L1VL4 LINE L1 69 2048 -1511 3 651 464 45 0 0 chrX 8766936 8767002 -157883294 + L1_Mur1 LINE L1 3839 3904 -1982 3 651 1001 77 19 25 chrX 8767167 8767327 -157882969 - L1Md_F2 LINE L1 -10 6572 6414 3 651 3123 209 43 42 chrX 8767676 8767741 -157882555 + Lx6 LINE L1 6674 6743 -717 3 651 396 71 0 0 chrX 8767741 8767797 -157882499 + (CCAA)n Simple_repeat Simple_repeat 4 59 0 3 651 3123 209 43 42 chrX 8767797 8768514 -157881782 + Lx6 LINE L1 6744 7457 -3 3 651 841 194 0 0 chrX 8769468 8769612 -157880684 + B1_Mur4 SINE Alu 5 148 -2 3 651 6561 110 43 5 chrX 8770602 8772225 -157878071 - Lx LINE L1 0 6654 4971 3 651 1623 133 4 0 chrX 8772223 8772493 -157877803 + L1_Mur1 LINE L1 4926 5196 -690 3 651 248 280 81 29 chrX 8772634 8772770 -157877526 + LTR50 LTR ERVL 359 501 -294 3 651 4948 151 15 10 chrX 8772787 8773746 -157876550 + Lx5 LINE L1 5519 6494 -556 3 651 356 171 57 0 chrX 8773746 8773816 -157876480 - Lx5 LINE L1 -503 6547 6474 3 651 474 136 12 0 chrX 8773812 8773893 -157876403 + Lx5 LINE L1 6744 6825 -225 3 651 1557 201 39 56 chrX 8773891 8774249 -157876047 - Lx6 LINE L1 -18 7442 7091 3 651 428 236 218 0 chrX 8774273 8774383 -157875913 + B1_Mus2 SINE Alu 2 135 -12 3 651 833 89 0 8 chrX 8774384 8774509 -157875787 + (GGA)n Simple_repeat Simple_repeat 3 126 0 3 651 912 256 14 5 chrX 8775507 8775715 -157874581 - B3 SINE B2 -5 211 2 3 651 29 60 0 0 chrX 8777940 8777990 -157872306 + GC_rich Low_complexity Low_complexity 1 50 0 3 651 743 154 7 0 chrX 8778101 8778237 -157872059 + CT-rich Low_complexity Low_complexity 2 138 0 3 651 201 39 0 0 chrX 8778281 8778307 -157871989 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 3 651 180 0 0 0 chrX 8778826 8778846 -157871450 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 651 22 0 0 0 chrX 8778918 8778940 -157871356 + AT_rich Low_complexity Low_complexity 1 22 0 3 651 195 69 0 0 chrX 8779419 8779448 -157870848 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 651 415 313 178 38 chrX 8780182 8780624 -157869672 + L2a LINE L2 2821 3336 -39 3 651 238 220 0 63 chrX 8780881 8780944 -157869352 - MER5A1 DNA MER1_type 0 166 108 3 651 344 323 31 0 chrX 8780989 8781085 -157869211 - MER5A1 DNA MER1_type -57 109 11 3 651 248 326 74 49 chrX 8781190 8781393 -157868903 + L4 LINE RTE 1622 1829 -200 3 652 188 211 0 26 chrX 8781939 8781978 -157868318 + MIRm SINE MIR 221 258 -18 3 652 600 53 0 0 chrX 8782727 8782803 -157867493 + (CA)n Simple_repeat Simple_repeat 2 77 0 3 652 238 254 80 80 chrX 8782833 8782926 -157867370 - Charlie4a DNA MER1_type -11 497 395 3 652 261 0 0 0 chrX 8782926 8782955 -157867341 + (CCAA)n Simple_repeat Simple_repeat 3 31 0 3 652 238 254 80 80 chrX 8782955 8783011 -157867285 - Charlie4a DNA MER1_type -114 394 348 3 652 255 305 207 0 chrX 8783037 8783178 -157867118 - Charlie4a DNA MER1_type -223 285 111 3 652 630 245 58 0 chrX 8783178 8783317 -157866979 - B1_Mur1 SINE Alu 0 149 3 3 652 255 305 207 0 chrX 8783317 8783339 -157866957 - Charlie4a DNA MER1_type -398 110 89 3 652 501 250 7 60 chrX 8783342 8783373 -157866923 - ID_B1 SINE B4 -3 221 82 3 652 590 224 8 8 chrX 8783373 8783490 -157866806 - B1F1 SINE Alu -32 117 1 3 652 181 244 0 24 chrX 8783590 8783632 -157866664 + MIRm SINE MIR 221 261 -15 3 652 809 38 28 9 chrX 8783778 8783885 -157866411 + MTA_Mm LTR MaLR 1 109 -287 4 652 425 122 0 13 chrX 8784669 8784744 -157865552 + (TCCC)n Simple_repeat Simple_repeat 3 76 0 4 652 830 232 62 10 chrX 8784778 8784987 -157865309 - Lx6 LINE L1 0 7460 7241 4 652 765 202 221 18 chrX 8784986 8785203 -157865093 + Lx6 LINE L1 6679 6939 -521 4 652 545 252 91 14 chrX 8785367 8785536 -157864760 - B3A SINE B2 -6 210 30 4 652 491 258 61 6 chrX 8785668 8785832 -157864464 - L1MA7 LINE L1 -70 6221 6049 4 652 393 129 0 0 chrX 8785925 8785995 -157864301 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 652 183 279 16 0 chrX 8786699 8786760 -157863536 - MIRb SINE MIR -92 176 115 4 652 213 213 0 0 chrX 8787897 8787944 -157862352 + (TTCA)n Simple_repeat Simple_repeat 1 47 0 4 652 831 203 11 38 chrX 8787968 8788152 -157862144 - Lx8 LINE L1 -522 6951 6773 4 652 248 218 0 18 chrX 8788226 8788282 -157862014 + MER5A1 DNA MER1_type 101 155 -11 4 652 447 302 55 45 chrX 8788652 8788853 -157861443 - MLT1L LTR MaLR -190 420 218 4 652 1026 214 289 14 chrX 8789017 8789311 -157860985 + MTE2b LTR MaLR 1 375 -4 4 652 1016 212 71 0 chrX 8790965 8791163 -157859133 + B3 SINE B2 5 216 0 4 652 762 62 0 0 chrX 8791310 8791406 -157858890 + B2_Mm2 SINE B2 2 97 -98 4 652 1130 108 0 11 chrX 8792600 8792778 -157857518 + (AGGGGG)n Simple_repeat Simple_repeat 1 176 0 4 652 368 178 27 0 chrX 8792778 8792851 -157857445 - Lx9 LINE L1 -195 7449 7375 4 652 1161 231 14 11 chrX 8792857 8793141 -157857155 - L1_Mur3 LINE L1 -7194 518 234 4 652 675 241 134 57 chrX 8793157 8793496 -157856800 - Lx9 LINE L1 -1237 6407 5933 4 652 984 219 71 5 chrX 8793496 8793693 -157856603 - B3 SINE B2 -6 210 1 4 652 287 256 51 68 chrX 8793693 8793711 -157856585 - Lx9 LINE L1 -1712 5932 5917 4 652 892 188 0 20 chrX 8794144 8794281 -157856015 + B1_Mur1 SINE Alu 1 137 -12 4 652 195 42 0 0 chrX 8794281 8794305 -157855991 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 4 652 892 188 0 20 chrX 8794305 8794319 -157855977 + B1_Mur1 SINE Alu 138 149 0 4 652 239 239 14 0 chrX 8794448 8794519 -157855777 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 652 582 300 161 54 chrX 8794527 8794788 -157855508 - B4 SINE B4 -2 290 2 4 652 626 118 10 0 chrX 8795349 8795451 -157854845 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 4 652 728 229 7 0 chrX 8795455 8795599 -157854697 - B1_Mur1 SINE Alu 0 149 5 4 652 360 268 139 8 chrX 8796163 8796415 -157853881 - L1M5 LINE L1 -577 5547 5263 4 652 588 29 0 0 chrX 8798365 8798435 -157851861 + (TTCTG)n Simple_repeat Simple_repeat 3 72 0 4 652 659 135 86 26 chrX 8798573 8798725 -157851571 + Lx4A LINE L1 6896 7056 -2 4 652 441 0 0 0 chrX 8799382 8799431 -157850865 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 652 350 285 77 75 chrX 8800359 8800643 -157849653 + L1MC4 LINE L1 7418 7682 -200 4 652 7506 84 1 3 chrX 8800631 8801871 -157848425 + L1_Mus3 LINE L1 4852 6087 -551 4 652 1500 240 19 31 chrX 8801874 8802264 -157848032 - RMER19C LTR ERVK -238 664 261 4 652 3659 77 8 4 chrX 8802267 8802760 -157847536 + L1_Mus3 LINE L1 6143 6637 -1 4 652 25 0 0 0 chrX 8802760 8802785 -157847511 + AT_rich Low_complexity Low_complexity 1 25 0 4 652 458 269 124 33 chrX 8802792 8803034 -157847262 + L1MC4 LINE L1 7690 7953 -89 4 652 825 267 24 28 chrX 8803766 8803978 -157846318 + ID_B1 SINE B4 10 220 -4 4 652 659 299 6 25 chrX 8804316 8804474 -157845822 - RSINE1 SINE B4 0 165 11 4 652 5465 187 24 7 chrX 8804867 8805825 -157844471 - Lx5 LINE L1 0 7050 6077 4 652 353 102 17 0 chrX 8806342 8806401 -157843895 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 652 321 183 16 16 chrX 8807077 8807138 -157843158 + 4.5SRNA scRNA scRNA 26 86 -8 4 652 625 111 121 0 chrX 8807085 8807184 -157843112 + B1_Mm SINE Alu 37 147 0 4 652 474 222 29 7 chrX 8807281 8807419 -157842877 - L1ME3 LINE L1 -175 5987 5845 4 652 237 351 158 0 chrX 8809784 8809898 -157840398 - MIR SINE MIR -56 152 21 4 652 457 239 11 0 chrX 8811409 8811497 -157838799 - RSINE1 SINE B4 -50 115 27 4 652 563 271 29 81 chrX 8811613 8811822 -157838474 + ORR1E LTR MaLR 4 201 -158 4 652 2013 171 16 87 chrX 8811847 8812068 -157838228 - MTC LTR MaLR -17 404 209 4 652 1144 206 23 23 chrX 8812068 8812282 -157838014 - B3 SINE B2 0 216 3 4 652 2013 171 16 87 chrX 8812282 8812495 -157837801 - MTC LTR MaLR -213 208 1 4 652 262 242 30 50 chrX 8812560 8812659 -157837637 + ORR1E LTR MaLR 250 365 -14 4 652 419 257 71 35 chrX 8812751 8812864 -157837432 + RSINE1 SINE B4 3 119 -46 4 652 203 286 129 0 chrX 8813167 8813237 -157837059 - MIR SINE MIR -63 145 67 4 652 4436 29 12 2 chrX 8813400 8813888 -157836408 - MT2_Mm LTR ERVL 0 493 1 4 652 451 242 71 48 chrX 8814976 8815102 -157835194 - RSINE1 SINE B4 -13 152 24 4 652 311 211 0 40 chrX 8815128 8815202 -157835094 - MTEa-int LTR MaLR -1505 75 5 4 652 242 260 27 14 chrX 8815211 8815285 -157835011 - MTEa LTR MaLR -15 364 290 4 652 342 0 0 0 chrX 8815539 8815577 -157834719 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 4 652 241 0 75 25 chrX 8815669 8815709 -157834587 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 4 652 1863 153 6 82 chrX 8815712 8816068 -157834228 - ORR1A4 LTR MaLR 0 329 1 4 652 6808 123 13 72 chrX 8816063 8817296 -157833000 - ORR1A4-int LTR MaLR -2 1961 802 4 652 293 211 48 4 chrX 8817249 8817333 -157832963 - B1_Mus1 SINE Alu -22 126 32 4 652 185 383 9 9 chrX 8817608 8817716 -157832580 - MER5B DNA MER1_type -26 152 45 4 652 819 180 0 0 chrX 8817716 8817844 -157832452 + B1_Mus1 SINE Alu 2 129 -19 4 652 305 0 0 48 chrX 8817850 8817892 -157832404 + (CAAAC)n Simple_repeat Simple_repeat 1 40 0 4 652 453 259 94 22 chrX 8818696 8818834 -157831462 + MER5A1 DNA MER1_type 1 148 -18 4 652 247 237 0 33 chrX 8819314 8819375 -157830921 + B1_Mus2 SINE Alu 1 59 -88 4 652 601 120 9 48 chrX 8819414 8819519 -157830777 + B1_Mur1 SINE Alu 41 141 -8 4 652 676 232 109 35 chrX 8819797 8819998 -157830298 + B3 SINE B2 1 216 0 4 652 478 280 25 19 chrX 8820127 8820287 -157830009 - MER5A1 DNA MER1_type -2 164 4 4 652 2452 49 0 56 chrX 8821488 8821810 -157828486 + L1Md_F2 LINE L1 6279 6582 0 4 652 560 244 394 36 chrX 8822730 8822984 -157827312 - Lx6 LINE L1 -68 7392 7048 4 652 523 145 0 12 chrX 8822994 8823078 -157827218 + B1_Mur3 SINE Alu 58 140 -9 4 652 373 295 29 0 chrX 8823688 8823793 -157826503 - PB1D10 SINE Alu -8 109 2 4 652 218 299 29 43 chrX 8824326 8824396 -157825900 - L2c LINE L2 -38 3349 3281 4 652 301 284 26 52 chrX 8826378 8826493 -157823803 - LTR16C LTR ERVL -18 520 409 4 652 401 344 69 47 chrX 8826709 8826941 -157823355 - ORR1E LTR MaLR -122 237 1 4 652 432 338 123 33 chrX 8826941 8827143 -157823153 - LTR16C LTR ERVL -180 309 89 4 652 491 293 93 22 chrX 8827437 8827731 -157822565 - MLT2B2 LTR ERVL -65 332 3 4 652 219 146 0 0 chrX 8827777 8827818 -157822478 + (T)n Simple_repeat Simple_repeat 1 41 0 4 652 479 271 26 79 chrX 8827960 8828112 -157822184 - MER58A DNA MER1_type -52 172 29 4 652 220 96 19 37 chrX 8828154 8828208 -157822088 + (TTTG)n Simple_repeat Simple_repeat 4 56 0 4 652 26 30 0 0 chrX 8828896 8828929 -157821367 + AT_rich Low_complexity Low_complexity 1 33 0 4 652 223 295 0 60 chrX 8828960 8829043 -157821253 + ID4 SINE ID 3 80 -3 4 652 288 267 33 0 chrX 8829217 8829307 -157820989 + MER5A1 DNA MER1_type 71 163 -3 4 652 282 237 0 17 chrX 8830859 8830919 -157819377 + MIR SINE MIR 48 106 -102 4 652 618 351 18 21 chrX 8830978 8831260 -157819036 - Tigger12 DNA MER2_type -3 1956 1676 4 652 43 64 0 0 chrX 8831519 8831597 -157818699 + AT_rich Low_complexity Low_complexity 1 78 0 4 652 196 387 56 26 chrX 8832056 8832287 -157818009 - L2c LINE L2 -50 3337 3100 4 652 350 319 142 45 chrX 8832616 8832862 -157817434 - LTR16A1 LTR ERVL -170 286 17 4 652 180 366 70 18 chrX 8832872 8832986 -157817310 + L2c LINE L2 3103 3222 -165 4 652 369 0 0 0 chrX 8833703 8833744 -157816552 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 652 249 244 25 25 chrX 8833972 8834052 -157816244 - ID2 SINE ID -2 81 2 4 652 747 95 9 0 chrX 8834572 8834677 -157815619 - B2_Mm2 SINE B2 -88 107 2 4 652 22 0 0 0 chrX 8835046 8835068 -157815228 + AT_rich Low_complexity Low_complexity 1 22 0 4 652 827 279 18 27 chrX 8835314 8835539 -157814757 - ID_B1 SINE B4 0 224 2 4 652 22 0 0 0 chrX 8835870 8835892 -157814404 + AT_rich Low_complexity Low_complexity 1 22 0 4 652 534 320 108 67 chrX 8836199 8836560 -157813736 - LTR87 LTR ERVL? -70 554 179 4 652 245 273 72 0 chrX 8836583 8836695 -157813601 + MIR SINE MIR 82 210 -58 4 652 23 33 0 0 chrX 8836698 8836728 -157813568 + AT_rich Low_complexity Low_complexity 1 30 0 4 652 192 40 0 0 chrX 8836922 8836947 -157813349 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 652 301 368 13 0 chrX 8836952 8837028 -157813268 - ID4_ SINE ID -5 78 2 4 652 1099 232 0 0 chrX 8837653 8837864 -157812432 - B3 SINE B2 -5 211 1 4 652 239 331 60 11 chrX 8837979 8838162 -157812134 - L1M5 LINE L1 -1459 4687 4496 4 652 354 377 58 5 chrX 8838735 8838940 -157811356 + L2 LINE L2 2845 3060 -359 4 652 382 267 41 33 chrX 8839212 8839354 -157810942 + B1F SINE Alu 7 149 0 4 652 238 366 26 78 chrX 8839526 8839680 -157810616 + LTR84a LTR ERVL 468 613 -144 4 652 302 250 9 69 chrX 8840190 8840306 -157809990 - L1MC LINE L1 -2920 3226 3118 4 652 468 292 65 41 chrX 8841079 8841325 -157808971 + Charlie4a DNA MER1_type 112 363 -145 5 652 199 79 0 50 chrX 8841392 8841432 -157808864 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 5 652 280 300 136 15 chrX 8841459 8841591 -157808705 + Charlie4a DNA MER1_type 359 506 -2 5 652 189 0 0 0 chrX 8842331 8842352 -157807944 + (T)n Simple_repeat Simple_repeat 1 21 0 5 652 240 250 67 40 chrX 8843573 8843648 -157806648 + ID4 SINE ID 2 78 -5 5 652 271 309 27 27 chrX 8845128 8845240 -157805056 + ID4 SINE ID 3 114 -38 5 652 1023 90 0 0 chrX 8845244 8845388 -157804908 + (GGGGA)n Simple_repeat Simple_repeat 5 148 0 5 652 259 369 0 8 chrX 8848753 8848884 -157801412 + Lx7 LINE L1 7092 7221 -475 5 652 222 237 0 70 chrX 8848959 8849059 -157801237 + T-rich Low_complexity Low_complexity 2 94 0 5 652 330 167 0 0 chrX 8850026 8850086 -157800210 + (CCG)n Simple_repeat Simple_repeat 1 60 0 5 652 201 289 0 73 chrX 8850791 8850873 -157799423 - MIR SINE MIR -22 240 165 5 652 290 282 13 0 chrX 8851074 8851152 -157799144 - ID4 SINE ID -4 79 1 5 652 225 358 0 24 chrX 8851782 8851865 -157798431 - ID4 SINE ID -2 81 1 5 652 252 277 0 30 chrX 8852746 8852813 -157797483 + ID4 SINE ID 16 80 -3 5 652 21 0 0 0 chrX 8853349 8853370 -157796926 + AT_rich Low_complexity Low_complexity 1 21 0 5 652 467 292 92 0 chrX 8853790 8853920 -157796376 + MER58A DNA MER1_type 3 144 -80 5 652 872 159 0 7 chrX 8854242 8854381 -157795915 + B1_Mur1 SINE Alu 3 140 -9 5 652 1578 27 5 0 chrX 8854407 8854591 -157795705 - B2_Mm1a SINE B2 -4 189 5 5 652 6506 59 2 0 chrX 8854796 8855649 -157794647 - L1_Mus2 LINE L1 -1 6565 5711 5 652 310 173 0 19 chrX 8855873 8855979 -157794317 + (TA)n Simple_repeat Simple_repeat 1 104 0 5 652 218 208 0 20 chrX 8856171 8856220 -157794076 + (TATG)n Simple_repeat Simple_repeat 3 50 0 5 652 236 279 0 0 chrX 8856304 8856347 -157793949 - ID4_ SINE ID -10 73 31 5 652 21 0 0 0 chrX 8856364 8856385 -157793911 + AT_rich Low_complexity Low_complexity 1 21 0 5 652 734 262 0 24 chrX 8856396 8856564 -157793732 - RSINE1 SINE B4 0 165 2 5 652 230 315 27 9 chrX 8856592 8856704 -157793592 - L1MC LINE L1 -2066 5816 5703 5 652 204 40 0 0 chrX 8856945 8856970 -157793326 + (T)n Simple_repeat Simple_repeat 1 25 0 5 652 3215 46 0 5 chrX 8856986 8857382 -157792914 - L1Md_F2 LINE L1 -12 6570 6177 5 652 732 86 0 9 chrX 8857382 8857488 -157792808 + L1Md_F2 LINE L1 6084 6188 -394 5 652 263 122 20 0 chrX 8858137 8858186 -157792110 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 652 263 330 0 142 chrX 8858516 8858629 -157791667 - B1F1 SINE Alu -37 112 16 5 652 299 327 44 83 chrX 8859514 8859694 -157790602 - MLT1G1 LTR MaLR -30 549 377 5 652 1389 61 0 0 chrX 8859825 8860005 -157790291 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 5 652 2070 93 3 16 chrX 8860033 8860339 -157789957 - L1Md_F2 LINE L1 -9 6573 6272 5 652 333 343 67 44 chrX 8860501 8860681 -157789615 + B4A SINE B4 86 269 -23 5 652 1644 144 110 0 chrX 8861726 8862045 -157788251 + Lx3B LINE L1 6620 6973 0 5 652 21 0 0 0 chrX 8862047 8862068 -157788228 + AT_rich Low_complexity Low_complexity 1 21 0 5 652 216 182 0 0 chrX 8862215 8862259 -157788037 + CT-rich Low_complexity Low_complexity 2 45 0 5 652 636 198 27 0 chrX 8862264 8862375 -157787921 - B1_Mur4 SINE Alu -8 142 29 5 652 1076 88 0 20 chrX 8863077 8863212 -157787084 + B1_Mus1 SINE Alu 2 136 -12 5 652 261 0 0 83 chrX 8863212 8863260 -157787036 + (CAAAA)n Simple_repeat Simple_repeat 5 48 0 5 652 1076 88 0 20 chrX 8863260 8863274 -157787022 + B1_Mus1 SINE Alu 137 148 0 5 652 664 253 49 27 chrX 8863412 8863595 -157786701 - B3 SINE B2 -8 208 22 5 652 229 354 10 0 chrX 8864144 8864240 -157786056 + Lx8 LINE L1 7169 7265 -208 5 652 451 248 51 42 chrX 8864479 8864597 -157785699 + B1F SINE Alu 29 147 -2 5 652 5288 112 8 10 chrX 8864772 8865646 -157784650 - YREP_Mm Unknown Unknown -822 990 119 5 652 526 165 31 47 chrX 8865881 8866008 -157784288 - YREP_Mm Unknown Unknown -1680 132 8 5 652 444 371 101 43 chrX 8866492 8866889 -157783407 + LTR16E1 LTR ERVL 61 480 -58 5 652 374 209 154 0 chrX 8868310 8868401 -157781895 + B3 SINE B2 20 124 -92 5 652 560 289 78 14 chrX 8868472 8868767 -157781529 - L1MA6 LINE L1 -202 6098 5785 5 652 574 207 6 6 chrX 8868769 8868939 -157781357 + (TA)n Simple_repeat Simple_repeat 2 171 0 5 652 534 214 31 79 chrX 8868940 8869168 -157781128 - L1MA6 LINE L1 -537 5763 5547 5 652 295 323 0 29 chrX 8869528 8869630 -157780666 - PB1D10 SINE Alu -7 110 12 5 652 288 0 0 0 chrX 8869649 8869681 -157780615 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 652 1031 279 59 47 chrX 8870229 8870568 -157779728 - MTE2b LTR MaLR -32 347 5 5 652 2792 91 116 7 chrX 8870614 8871044 -157779252 - L1Md_F2 LINE L1 -13 6569 6093 5 652 1885 60 0 0 chrX 8871044 8871294 -157779002 + L1Md_F2 LINE L1 5821 6070 -512 5 652 780 42 0 0 chrX 8871383 8871479 -157778817 + (TG)n Simple_repeat Simple_repeat 2 97 0 5 652 316 327 32 92 chrX 8871868 8872053 -157778243 + ORR1D2 LTR MaLR 41 214 -156 5 652 213 348 32 0 chrX 8872214 8872372 -157777924 + (CTCTG)n Simple_repeat Simple_repeat 4 166 0 5 652 235 337 28 28 chrX 8872389 8872569 -157777727 + (CTCTG)n Simple_repeat Simple_repeat 1 180 0 5 652 263 335 32 0 chrX 8872622 8872780 -157777516 + (CTCTG)n Simple_repeat Simple_repeat 4 166 0 5 652 224 348 32 0 chrX 8872826 8872984 -157777312 + (CTCTG)n Simple_repeat Simple_repeat 4 166 0 5 652 224 348 32 0 chrX 8872996 8873154 -157777142 + (CTCTG)n Simple_repeat Simple_repeat 4 166 0 5 652 274 326 28 28 chrX 8873171 8873351 -157776945 + (CTCTG)n Simple_repeat Simple_repeat 1 180 0 5 652 334 286 48 0 chrX 8873371 8873476 -157776820 + ORR1D2 LTR MaLR 171 280 -90 5 652 1845 218 43 2 chrX 8873498 8873917 -157776379 - Lx6 LINE L1 -26 7434 6999 5 652 372 230 195 0 chrX 8873918 8874031 -157776265 + ORR1D2 LTR MaLR 234 368 -2 5 652 360 200 0 0 chrX 8874074 8874149 -157776147 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 652 289 307 97 7 chrX 8875096 8875250 -157775046 + MTEb LTR MaLR 199 366 -13 5 652 187 316 52 13 chrX 8876231 8876308 -157773988 + MIR SINE MIR 8 87 -175 5 652 195 255 83 93 chrX 8876321 8876429 -157773867 + MIR SINE MIR 141 247 -15 5 652 444 232 0 1 chrX 8876974 8877103 -157773193 - L1MA4A LINE L1 -375 5928 5801 5 652 637 260 77 13 chrX 8877274 8877430 -157772866 + B3A SINE B2 33 198 0 5 652 538 213 170 9 chrX 8877463 8877570 -157772726 + Lx9 LINE L1 7390 7515 -129 5 652 498 75 0 0 chrX 8877570 8877637 -157772659 + (CA)n Simple_repeat Simple_repeat 1 67 0 5 652 538 213 170 9 chrX 8877637 8877747 -157772549 + Lx9 LINE L1 7516 7642 -2 5 652 389 365 136 58 chrX 8877873 8878046 -157772250 - L1MEg LINE L1 -5645 439 250 5 652 507 77 0 0 chrX 8878046 8878124 -157772172 - L1Md_T LINE L1 0 6582 6505 5 652 389 365 136 58 chrX 8878124 8878348 -157771948 - L1MEg LINE L1 -5835 249 11 5 652 4967 24 9 3 chrX 8878352 8878935 -157771361 + L1Md_F2 LINE L1 5994 6579 -3 5 652 206 140 0 74 chrX 8878939 8878993 -157771303 + A-rich Low_complexity Low_complexity 1 50 0 5 652 909 269 129 33 chrX 8879227 8879746 -157770550 + L1MB7 LINE L1 5406 6000 -178 5 652 194 274 124 21 chrX 8880563 8880660 -157769636 - L2a LINE L2 -30 3396 3290 5 652 472 294 63 0 chrX 8880842 8880968 -157769328 + ID_B1 SINE B4 88 221 -3 5 652 272 225 42 14 chrX 8881112 8881184 -157769112 - MER5A1 DNA MER1_type -12 154 81 5 652 615 14 0 0 chrX 8881720 8881792 -157768504 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 652 258 308 75 0 chrX 8882287 8882394 -157767902 - PB1D10 SINE Alu -2 115 1 5 652 792 158 61 202 chrX 8883233 8883495 -157766801 + URR1B DNA MER1_type 1 225 0 5 652 4572 34 0 0 chrX 8883900 8884435 -157765861 - L1Md_T LINE L1 0 6582 6048 5 652 252 315 125 36 chrX 8884866 8884978 -157765318 - RSINE1 SINE B4 -19 146 25 5 652 566 289 63 35 chrX 8885080 8885427 -157764869 + L1MC LINE L1 4750 5106 -1040 5 652 318 355 149 20 chrX 8885679 8885880 -157764416 - LTR16C LTR ERVL -137 352 126 5 652 189 289 0 109 chrX 8889416 8889517 -157760779 + MIR SINE MIR 96 185 -77 5 652 442 356 27 0 chrX 8889738 8889887 -157760409 + RSINE1 SINE B4 1 153 -12 5 652 425 34 17 0 chrX 8889890 8889949 -157760347 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 652 868 282 182 31 chrX 8890944 8891565 -157758731 - L1MB1 LINE L1 -7 6305 5591 5 652 198 143 0 0 chrX 8891869 8891904 -157758392 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 652 192 40 0 0 chrX 8891963 8891988 -157758308 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 652 231 61 0 0 chrX 8892054 8892087 -157758209 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 652 420 256 119 0 chrX 8892224 8892384 -157757912 + Lx7 LINE L1 7285 7463 -233 5 652 516 218 7 15 chrX 8892388 8892523 -157757773 + Lx6 LINE L1 7316 7449 -11 5 652 266 235 0 0 chrX 8892654 8892705 -157757591 + PB1D9 SINE Alu 3 53 -67 5 652 897 246 26 4 chrX 8892722 8892955 -157757341 - L1MA6 LINE L1 -25 6275 6038 5 652 598 256 24 24 chrX 8893222 8893386 -157756910 - RMER30 DNA MER1_type -30 172 9 5 652 34 24 0 0 chrX 8894546 8894587 -157755709 + AT_rich Low_complexity Low_complexity 1 41 0 5 652 634 150 145 36 chrX 8894587 8894753 -157755543 - Lx4B LINE L1 -1 7057 6874 5 652 753 205 0 0 chrX 8894953 8895104 -157755192 + U1 snRNA snRNA 10 160 -5 5 652 470 286 39 93 chrX 8895571 8895883 -157754413 + MER33 DNA MER1_type 3 297 -27 5 652 3186 290 24 22 chrX 8896084 8897020 -157753276 - Lx8 LINE L1 -312 7161 6225 5 652 1508 267 117 31 chrX 8897077 8897517 -157752779 - L1M3e LINE L1 -849 6254 5760 5 652 231 88 0 0 chrX 8897517 8897551 -157752745 + (TGG)n Simple_repeat Simple_repeat 2 35 0 5 652 1508 267 117 31 chrX 8897551 8897855 -157752441 - L1M3e LINE L1 -1344 5759 5446 5 652 1018 110 21 0 chrX 8898674 8898819 -157751477 + B1_Mus1 SINE Alu 1 148 0 5 652 1309 234 19 67 chrX 8899936 8900312 -157749984 + ORR1D2 LTR MaLR 8 365 -5 5 652 292 341 43 0 chrX 8900321 8900459 -157749837 - L1M3e LINE L1 -6825 205 62 5 652 1012 280 126 35 chrX 8900535 8901358 -157748938 + Lx7 LINE L1 5277 6157 -1539 5 652 207 184 0 0 chrX 8901538 8901576 -157748720 + CT-rich Low_complexity Low_complexity 1 38 0 5 652 253 208 26 0 chrX 8901592 8901669 -157748627 + CT-rich Low_complexity Low_complexity 1 79 0 5 652 3664 123 49 5 chrX 8901758 8902332 -157747964 - Lx4A LINE L1 0 7058 6460 5 652 294 233 135 10 chrX 8902687 8902791 -157747505 - MIR SINE MIR -133 135 19 5 652 2538 62 0 3 chrX 8902936 8903260 -157747036 - L1Md_F2 LINE L1 0 6582 6260 6 652 1879 91 0 0 chrX 8903261 8903504 -157746792 + L1Md_F LINE L1 323 565 -5954 6 652 524 243 126 13 chrX 8906058 8906296 -157744000 - RLTR10A LTR ERVK 0 411 147 6 652 1803 276 56 40 chrX 8906336 8908021 -157742275 - RLTR45-int LTR ERVK -204 7040 4046 6 652 516 295 30 25 chrX 8908064 8908467 -157741829 - MMERVK10C-int LTR ERVK -2675 3867 3544 6 652 1366 293 32 14 chrX 8908714 8909209 -157741087 - MMERVK10C-int LTR ERVK -3961 3620 3117 6 652 361 212 97 49 chrX 8909500 8909644 -157740652 - RLTR45-int LTR ERVK -1519 468 318 6 652 404 250 157 30 chrX 8909660 8909895 -157740401 - RLTR10A LTR ERVK 0 411 147 6 652 201 94 0 0 chrX 8910108 8910140 -157740156 + (CCA)n Simple_repeat Simple_repeat 3 34 0 6 652 294 50 0 0 chrX 8910140 8910180 -157740116 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 652 389 306 101 27 chrX 8911600 8911884 -157738412 + RMER20B LTR ERVK 136 444 -183 6 652 340 195 119 0 chrX 8912634 8912752 -157737544 + L1MB1 LINE L1 5072 5203 -937 6 653 414 0 0 0 chrX 8912941 8912987 -157737309 + (TC)n Simple_repeat Simple_repeat 2 47 0 6 653 207 0 0 0 chrX 8912987 8913009 -157737287 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 653 210 250 19 0 chrX 8913009 8913061 -157737235 + CT-rich Low_complexity Low_complexity 1 53 0 6 653 292 208 28 0 chrX 8913265 8913337 -157736959 + L1MB1 LINE L1 5227 5300 -840 6 653 207 0 0 0 chrX 8913445 8913468 -157736828 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 6 653 1096 84 7 0 chrX 8913507 8913650 -157736646 + B1_Mus2 SINE Alu 3 146 -1 6 653 235 117 154 13 chrX 8913665 8913743 -157736553 + L1MB1 LINE L1 5289 5377 -806 6 653 232 91 0 0 chrX 8913743 8913776 -157736520 + U2 snRNA snRNA 1 33 -155 6 653 1607 278 55 51 chrX 8913803 8914454 -157735842 + L1MB1 LINE L1 5452 6105 -84 6 653 411 306 0 0 chrX 8914466 8914577 -157735719 + PB1D10 SINE Alu 7 117 0 6 653 234 91 0 0 chrX 8914577 8914610 -157735686 + (A)n Simple_repeat Simple_repeat 1 33 0 6 653 306 132 0 0 chrX 8914966 8915019 -157735277 + (CAT)n Simple_repeat Simple_repeat 2 54 0 6 653 2732 83 0 0 chrX 8915069 8915429 -157734867 - L1_Mus1 LINE L1 -515 6052 5693 6 653 312 74 0 115 chrX 8915429 8915490 -157734806 + L1_Mus2 LINE L1 6513 6566 0 6 653 515 271 119 18 chrX 8915686 8915904 -157734392 + MLT1B LTR MaLR 143 382 -8 6 653 298 272 141 23 chrX 8916328 8916456 -157733840 + MTE2b LTR MaLR 1 143 -236 6 653 271 295 90 0 chrX 8917372 8917450 -157732846 - MLT1B LTR MaLR -17 373 289 6 653 351 352 0 20 chrX 8917550 8917698 -157732598 + MLT1H LTR MaLR 4 148 -401 6 653 436 156 0 13 chrX 8917690 8917768 -157732528 + B1_Mur1 SINE Alu 64 140 -9 6 653 6593 71 7 0 chrX 8917984 8918833 -157731463 - L1_Mus2 LINE L1 -1 6565 5711 6 653 223 174 0 0 chrX 8919072 8919118 -157731178 + (TA)n Simple_repeat Simple_repeat 1 46 0 6 653 246 341 34 67 chrX 8921554 8921733 -157728563 - MLT1G1 LTR MaLR -30 549 377 6 653 1122 122 0 0 chrX 8921884 8922064 -157728232 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 6 653 771 75 8 16 chrX 8922099 8922221 -157728075 - L1Md_F2 LINE L1 -13 6569 6449 6 653 1592 241 53 136 chrX 8922237 8922841 -157727455 + RLTR1D LTR ERV1 52 605 0 6 653 1351 105 0 0 chrX 8922841 8923022 -157727274 - L1Md_F2 LINE L1 -130 6452 6272 6 653 2175 104 3 69 chrX 8923041 8923402 -157726894 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 653 21529 13 2 0 chrX 8923402 8925757 -157724539 - IAPEz-int LTR ERVK 0 6481 4123 6 653 953 80 24 0 chrX 8925759 8925884 -157724412 - IAPEz-int LTR ERVK -2770 4910 4783 6 653 1876 111 4 4 chrX 8925879 8926141 -157724155 - IAPEz-int LTR ERVK -5183 2497 2236 6 653 454 66 0 32 chrX 8926130 8926193 -157724103 - IAPEz-int LTR ERVK -5062 1419 1359 6 653 4575 55 65 43 chrX 8926193 8926841 -157723455 - IAPEz-int LTR ERVK -5819 662 1 6 653 1971 95 3 71 chrX 8926842 8927192 -157723104 - IAPLTR1a_Mm LTR ERVK -11 326 1 6 653 285 341 61 39 chrX 8927338 8927518 -157722778 + B4A SINE B4 86 269 -23 6 653 1293 103 87 0 chrX 8928757 8928952 -157721344 + Lx3C LINE L1 6620 6831 -145 6 653 774 231 66 5 chrX 8929035 8929231 -157721065 - B3 SINE B2 -8 208 1 6 653 569 245 102 99 chrX 8929856 8929950 -157720346 - MER2 DNA MER2_type -13 332 241 6 653 2853 69 45 10 chrX 8929950 8930347 -157719949 - RLTR10A LTR ERVK 0 411 1 6 653 569 245 102 99 chrX 8930347 8930385 -157719911 - MER2 DNA MER2_type -105 240 210 6 653 469 293 8 0 chrX 8930385 8930508 -157719788 - PB1 SINE Alu -3 124 1 6 653 569 245 102 99 chrX 8930508 8930687 -157719609 - MER2 DNA MER2_type -136 209 19 6 653 245 287 148 0 chrX 8931144 8931252 -157719044 + Lx8 LINE L1 7082 7205 -268 6 653 255 354 10 0 chrX 8931262 8931358 -157718938 + Lx8 LINE L1 7169 7265 -208 6 653 410 264 53 35 chrX 8931597 8931711 -157718585 + B1F SINE Alu 29 144 -5 6 653 8012 58 1 3 chrX 8931868 8933014 -157717282 - L1Md_F2 LINE L1 0 6582 5441 6 653 1861 41 0 0 chrX 8933012 8933231 -157717065 - L1Md_F2 LINE L1 -271 6311 6093 6 653 2118 47 0 0 chrX 8933227 8933481 -157716815 + L1Md_F2 LINE L1 5817 6070 -512 6 653 390 42 0 0 chrX 8933570 8933618 -157716678 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 653 304 321 21 111 chrX 8933997 8934186 -157716110 + ORR1D2 LTR MaLR 38 209 -161 6 653 205 362 26 0 chrX 8934186 8934338 -157715958 + (CTCTG)n Simple_repeat Simple_repeat 4 159 0 6 653 2164 208 59 7 chrX 8934482 8934941 -157715355 - Lx6 LINE L1 0 7460 6978 6 653 353 206 174 0 chrX 8934943 8935035 -157715261 + ORR1D2 LTR MaLR 261 368 -2 6 653 375 237 0 0 chrX 8935078 8935171 -157715125 + (TA)n Simple_repeat Simple_repeat 2 94 0 6 653 299 283 119 6 chrX 8936123 8936283 -157714013 + MTEb LTR MaLR 202 379 0 6 653 4222 180 54 42 chrX 8936472 8937394 -157712902 + L1Md_F LINE L1 222 1154 -5462 6 653 33816 72 2 19 chrX 8937404 8942572 -157707724 + L1Md_F2 LINE L1 511 5585 -298 6 653 7964 55 1 4 chrX 8942573 8943560 -157706736 + L1Md_F2 LINE L1 5587 6570 -12 6 653 5137 76 0 0 chrX 8943560 8944294 -157706002 + L1Md_F LINE L1 1174 1907 -3976 6 653 3790 35 5 0 chrX 8944295 8944729 -157705567 - RLTR10C LTR ERVK 0 436 1 6 653 8286 27 2 0 chrX 8944729 8945656 -157704640 - MMERVK10C-int LTR ERVK -2 7579 6651 6 653 12551 33 8 0 chrX 8945647 8947086 -157703210 - MMERVK10C-int LTR ERVK -1771 5810 4360 6 653 1978 49 3 4 chrX 8947079 8947384 -157702912 - MMERVK10C-int LTR ERVK -1100 887 652 6 653 356 89 0 0 chrX 8947387 8947432 -157702864 - MMERVK10C-int LTR ERVK -6405 137 93 6 653 295 101 86 43 chrX 8947432 8947525 -157702771 + CT-rich Low_complexity Low_complexity 3 99 0 6 653 429 0 0 0 chrX 8947607 8947653 -157702643 - MMERVK10C-int LTR ERVK -7314 267 222 6 653 233 191 0 0 chrX 8947653 8947695 -157702601 - RLTR27 LTR ERVK -37 272 231 6 653 1506 50 0 0 chrX 8947695 8947875 -157702421 - MMERVK10C-int LTR ERVK -7401 180 1 6 653 3826 32 5 0 chrX 8947875 8948309 -157701987 - RLTR10C LTR ERVK 0 436 1 6 653 9062 134 9 2 chrX 8948309 8949783 -157700513 + L1_Mm LINE L1 1903 3387 -2496 6 653 293 239 76 0 chrX 8950025 8950117 -157700179 - MIR SINE MIR -131 131 33 6 653 267 79 0 0 chrX 8951007 8951045 -157699251 + (CCA)n Simple_repeat Simple_repeat 3 40 0 6 653 510 57 0 0 chrX 8951045 8951115 -157699181 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 653 390 298 67 78 chrX 8952537 8952821 -157697475 + RMER20B LTR ERVK 136 470 -157 6 653 328 202 109 0 chrX 8953549 8953668 -157696628 + L1M3 LINE L1 5072 5203 -937 6 653 268 24 49 0 chrX 8953856 8953897 -157696399 + (TC)n Simple_repeat Simple_repeat 2 44 0 6 653 183 42 0 0 chrX 8953897 8953921 -157696375 + (TTCTCC)n Simple_repeat Simple_repeat 4 27 0 6 653 261 0 0 0 chrX 8954002 8954031 -157696265 + (CCAA)n Simple_repeat Simple_repeat 3 31 0 6 653 6455 83 1 9 chrX 8954091 8954954 -157695342 - L1_Mus2 LINE L1 0 6566 5711 6 653 17183 99 29 111 chrX 8956208 8959210 -157691086 + L1Md_F LINE L1 181 2887 -2996 6 653 8918 17 0 0 chrX 8959210 8960205 -157690091 + L1Md_A LINE L1 5588 6582 0 6 653 17183 78 5 155 chrX 8960205 8960340 -157689956 + L1Md_F LINE L1 2888 2888 -2995 6 653 8236 42 4 2 chrX 8960340 8961333 -157688963 + L1Md_F2 LINE L1 5587 6581 -1 6 653 17183 78 5 155 chrX 8961333 8962413 -157687883 + L1Md_F LINE L1 2888 3953 -1930 6 653 3015 87 84 0 chrX 8962413 8962851 -157687445 + IAPLTR2_Mm LTR ERVK 1 475 0 6 653 4049 89 38 39 chrX 8962853 8963565 -157686731 + IAPEz-int LTR ERVK 3 662 -5819 6 653 962 59 0 0 chrX 8963565 8963684 -157686612 + IAPEz-int LTR ERVK 1359 1477 -5004 6 653 1913 86 4 0 chrX 8963685 8963930 -157686366 + IAPEz-int LTR ERVK 2252 2497 -5183 6 653 14181 58 13 3 chrX 8963957 8965712 -157684584 + IAPEz-int LTR ERVK 4708 6479 -2 6 653 2859 89 80 50 chrX 8965714 8966175 -157684121 + IAPLTR2_Mm LTR ERVK 1 475 0 6 653 2777 41 0 0 chrX 8966175 8966514 -157683782 + L1Md_F LINE L1 3948 4286 -1597 6 653 4679 140 41 48 chrX 8966515 8967420 -157682876 + L1Md_T LINE L1 307 1205 -5411 6 653 37108 33 0 0 chrX 8967426 8971843 -157678453 + L1Md_T LINE L1 1170 5586 -297 6 653 8193 54 0 0 chrX 8971843 8972838 -157677458 + L1Md_T LINE L1 5587 6581 -1 6 653 180 0 0 0 chrX 8972844 8972864 -157677432 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 6 653 12293 70 6 1 chrX 8972865 8974812 -157675484 + L1Md_F2 LINE L1 4280 6235 -347 6 653 211 311 13 26 chrX 8983000 8983076 -157667220 + B1F SINE Alu 49 123 -26 6 653 994 137 0 0 chrX 8985817 8985963 -157664333 + B1_Mm SINE Alu 2 147 0 6 653 657 86 0 0 chrX 8988746 8988839 -157661457 + (TA)n Simple_repeat Simple_repeat 2 94 0 6 653 1012 216 9 9 chrX 8988900 8989115 -157661181 + B3 SINE B2 1 215 -1 6 653 511 248 98 0 chrX 8989165 8989298 -157660998 - RSINE1 SINE B4 -16 149 4 6 653 22 0 0 0 chrX 8989615 8989637 -157660659 + AT_rich Low_complexity Low_complexity 1 22 0 6 653 473 241 95 0 chrX 8989653 8989769 -157660527 - B3A SINE B2 -70 128 2 6 653 352 252 30 61 chrX 8989769 8989877 -157660419 + MTEb LTR MaLR 276 379 0 6 653 239 312 13 0 chrX 8990719 8990796 -157659500 - L3 LINE CR1 -9 4480 4403 6 653 777 133 0 0 chrX 8990960 8991095 -157659201 + (CA)n Simple_repeat Simple_repeat 2 136 0 6 653 219 103 0 0 chrX 8991499 8991538 -157658758 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 653 502 207 72 151 chrX 8991869 8992088 -157658208 - RMER4B LTR ERVK -24 561 342 6 653 944 78 0 0 chrX 8992208 8992336 -157657960 + L1_Mus2 LINE L1 6439 6566 0 6 653 245 303 72 24 chrX 8992492 8992617 -157657679 - MLT1I LTR MaLR 0 411 281 6 653 6817 138 62 14 chrX 8992920 8994675 -157655621 - Lx LINE L1 0 6654 4776 6 653 7806 67 0 7 chrX 8994677 8995693 -157654603 - L1_Mus1 LINE L1 0 6567 5587 6 653 2777 108 17 2 chrX 8995698 8996107 -157654189 + L1_Mm LINE L1 4572 4986 -897 6 653 1694 111 8 11 chrX 8996097 8996362 -157653934 - L1VL1 LINE L1 -6141 281 18 6 653 2574 44 22 0 chrX 8996358 8996673 -157653623 + L1Md_F2 LINE L1 5664 5985 -597 6 653 769 21 52 0 chrX 8996658 8996755 -157653541 + L1_Mm LINE L1 5346 5447 -436 6 653 1143 74 40 0 chrX 8996753 8996902 -157653394 + L1Md_F2 LINE L1 5989 6143 -439 6 653 1172 77 0 45 chrX 8996902 8997079 -157653217 + L1Md_F2 LINE L1 6404 6572 -10 6 653 4804 91 3 6 chrX 8997079 8997730 -157652566 + L1_Mm LINE L1 4965 5613 -270 6 653 12381 147 32 18 chrX 8997756 9000000 -157650296 - Lx LINE L1 -1540 4343 2070 6 653 5287 78 29 1 chrX 9000009 9000630 -157649666 - L1VL2 LINE L1 -1850 1765 1122 1 653 212 0 36 0 chrX 9000630 9000658 -157649638 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 653 5287 103 18 2 chrX 9000658 9001480 -157648816 - L1VL2 LINE L1 -2494 1121 290 1 653 277 361 131 7 chrX 9001604 9001749 -157648547 + MIR SINE MIR 52 214 -48 3 653 254 265 173 12 chrX 9001879 9002047 -157648249 - Lx8 LINE L1 -9 7464 7270 4 653 989 234 33 9 chrX 9002169 9002380 -157647916 - B3 SINE B2 0 216 1 5 653 682 308 20 39 chrX 9002412 9002615 -157647681 - B3 SINE B2 -17 199 1 6 653 1181 124 11 6 chrX 9003067 9003246 -157647050 - B2_Mm2 SINE B2 -14 181 2 7 653 28 29 0 0 chrX 9003791 9003826 -157646470 + AT_rich Low_complexity Low_complexity 1 35 0 8 653 1121 66 0 0 chrX 9003882 9004019 -157646277 - B1_Mus1 SINE Alu -10 138 2 9 653 39507 7 0 1 chrX 9004419 9011397 -157638899 - L1Md_A LINE L1 0 6582 1 1 653 366 231 0 0 chrX 9011692 9011783 -157638513 + (CA)n Simple_repeat Simple_repeat 1 91 0 1 653 29 0 0 0 chrX 9011821 9011850 -157638446 + AT_rich Low_complexity Low_complexity 1 29 0 1 653 337 291 39 0 chrX 9011921 9012024 -157638272 - PB1D10 SINE Alu -10 107 1 1 653 805 244 50 38 chrX 9013024 9013262 -157637034 + Lx6 LINE L1 7194 7434 -26 1 653 189 147 0 0 chrX 9014603 9014637 -157635659 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 1 653 217 269 49 49 chrX 9015380 9015462 -157634834 + B1_Mus2 SINE Alu 51 132 -15 1 653 2986 40 70 13 chrX 9015715 9016099 -157634197 + MTB_Mm LTR MaLR 2 407 0 1 653 328 331 55 48 chrX 9016236 9016401 -157633895 + MER5A1 DNA MER1_type 1 166 0 1 653 343 250 0 0 chrX 9016414 9016482 -157633814 - RMER30 DNA MER1_type -2 200 133 1 653 1107 280 54 83 chrX 9018184 9018570 -157631726 - MTE2a LTR MaLR 0 379 5 2 653 439 322 52 34 chrX 9018790 9019008 -157631288 + MIRb SINE MIR 19 246 -22 2 653 497 254 111 34 chrX 9019064 9019272 -157631024 - MER2 DNA MER2_type -121 224 1 2 653 264 371 59 49 chrX 9019932 9020034 -157630262 - PB1D10 SINE Alu -5 112 10 2 653 650 313 1 9 chrX 9020117 9020295 -157630001 + B3A SINE B2 4 164 -34 2 653 285 29 0 0 chrX 9020295 9020329 -157629967 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 653 355 335 10 98 chrX 9020329 9020355 -157629941 + B2_Mm2 SINE B2 163 190 -5 2 653 379 312 23 30 chrX 9020896 9021028 -157629268 + B1F SINE Alu 14 144 -5 2 653 290 316 0 0 chrX 9021226 9021302 -157628994 + ID2 SINE ID 1 76 -7 2 653 333 118 0 0 chrX 9021307 9021358 -157628938 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 653 840 227 108 0 chrX 9022110 9022304 -157627992 - B3 SINE B2 0 216 2 2 653 466 281 60 67 chrX 9022355 9022504 -157627792 - RSINE1 SINE B4 -4 161 14 3 653 345 47 0 0 chrX 9022504 9022547 -157627749 + (CTTG)n Simple_repeat Simple_repeat 1 43 0 3 653 1287 84 0 0 chrX 9022581 9022759 -157627537 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 3 653 261 342 67 37 chrX 9022843 9023007 -157627289 - RMER4A LTR ERVK -269 197 29 3 653 258 255 0 0 chrX 9023230 9023281 -157627015 - ID4_ SINE ID -15 68 18 3 653 217 262 58 35 chrX 9023288 9023317 -157626979 - PB1D10 SINE Alu 0 117 29 3 653 253 241 86 0 chrX 9023317 9023375 -157626921 - ID_B1 SINE B4 -52 172 110 3 653 201 219 0 45 chrX 9024377 9024433 -157625863 + CT-rich Low_complexity Low_complexity 13 65 0 3 653 537 280 28 7 chrX 9024433 9024577 -157625719 - B1F SINE Alu -2 147 1 3 653 255 304 81 32 chrX 9025048 9025296 -157625000 + L1MA6 LINE L1 6041 6300 0 3 653 259 324 14 0 chrX 9025482 9025553 -157624743 + tRNA-Ala-GCY_ tRNA tRNA 1 72 -3 4 653 425 220 11 8 chrX 9027615 9027730 -157622566 + MTC LTR MaLR 2 114 -305 4 653 277 259 17 0 chrX 9028011 9028069 -157622227 - ID SINE ID -162 62 4 4 653 267 310 117 29 chrX 9028558 9028661 -157621635 + PB1D7 SINE Alu 2 113 -7 4 653 362 179 0 0 chrX 9028998 9029054 -157621242 - B1_Mur1 SINE Alu -11 138 83 4 653 220 346 29 9 chrX 9029098 9029203 -157621093 - MIRb SINE MIR -21 247 141 4 653 226 385 33 59 chrX 9029216 9029368 -157620928 + MIRb SINE MIR 8 155 -113 4 653 273 330 76 0 chrX 9031223 9031341 -157618955 - LTR16A1 LTR ERVL -3 453 327 4 653 619 165 198 40 chrX 9032863 9033040 -157617256 + Lx4B LINE L1 6847 7051 -7 4 653 414 355 56 15 chrX 9033078 9033320 -157616976 - MIR SINE MIR -10 258 10 4 653 629 305 61 9 chrX 9034679 9034891 -157615405 - MIR SINE MIR 0 262 40 5 653 410 298 134 26 chrX 9035888 9036266 -157614030 + MLT1E2 LTR MaLR 57 427 -197 5 653 329 270 8 33 chrX 9036263 9036395 -157613901 - BC1_Mm scRNA scRNA -20 132 5 5 653 669 88 261 50 chrX 9036593 9036712 -157613584 + B1_Mus1 SINE Alu 5 148 0 5 653 243 22 62 42 chrX 9036713 9036761 -157613535 + (CAAAAA)n Simple_repeat Simple_repeat 3 51 0 5 653 26 0 0 0 chrX 9037463 9037489 -157612807 + AT_rich Low_complexity Low_complexity 1 26 0 5 653 180 0 0 0 chrX 9038556 9038576 -157611720 + (A)n Simple_repeat Simple_repeat 1 20 0 5 653 257 68 0 22 chrX 9038805 9038850 -157611446 + (TTGG)n Simple_repeat Simple_repeat 4 47 0 5 653 220 120 0 57 chrX 9038859 9038912 -157611384 + T-rich Low_complexity Low_complexity 2 51 0 5 653 1179 112 0 0 chrX 9039596 9039775 -157610521 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 5 653 253 282 28 0 chrX 9040531 9040602 -157609694 - ID4 SINE ID -4 79 7 6 653 595 239 58 0 chrX 9041082 9041220 -157609076 - B4A SINE B4 -1 291 146 6 653 266 275 14 0 chrX 9041562 9041631 -157608665 - ID SINE ID -149 75 6 6 653 587 274 15 7 chrX 9042129 9042265 -157608031 - B1_Mur1 SINE Alu 0 149 13 6 653 236 130 0 36 chrX 9042548 9042604 -157607692 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 6 653 737 307 41 56 chrX 9043221 9043490 -157606806 - B4A SINE B4 -27 265 1 6 653 303 253 0 21 chrX 9043493 9043590 -157606706 - L1ME2z LINE L1 -172 6272 6178 6 654 216 0 0 0 chrX 9046007 9046031 -157604265 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 654 982 49 0 0 chrX 9046031 9046153 -157604143 - B1_Mus2 SINE Alu -9 138 17 6 654 261 180 0 0 chrX 9046933 9046983 -157603313 + (TA)n Simple_repeat Simple_repeat 1 50 0 6 654 364 320 18 49 chrX 9047004 9047168 -157603128 - MIR SINE MIR -59 203 45 7 654 517 321 129 94 chrX 9047798 9048287 -157602009 + LTR33A LTR ERVL 7 512 -8 7 654 226 284 24 36 chrX 9048439 9048523 -157601773 - RMER12 LTR ERVK -150 1172 1090 7 654 208 200 29 29 chrX 9048537 9048640 -157601656 + (TTA)n Simple_repeat Simple_repeat 1 103 0 7 654 5020 166 81 19 chrX 9048640 9048947 -157601349 - RMER12 LTR ERVK -213 1109 758 7 654 375 23 0 0 chrX 9048947 9048991 -157601305 + (TGGA)n Simple_repeat Simple_repeat 4 47 0 7 654 5020 166 81 19 chrX 9048991 9049010 -157601286 - RMER12 LTR ERVK -565 757 739 7 654 243 0 0 0 chrX 9049010 9049037 -157601259 + (CCAA)n Simple_repeat Simple_repeat 2 28 0 7 654 5020 166 81 19 chrX 9049037 9049753 -157600543 - RMER12 LTR ERVK -584 738 1 7 654 1079 305 77 11 chrX 9051128 9051585 -157598711 + Lx8 LINE L1 6431 6917 -556 7 654 1637 225 103 3 chrX 9051592 9051971 -157598325 - MTD LTR MaLR 0 419 3 7 654 308 282 7 0 chrX 9051993 9052117 -157598179 + Lx8 LINE L1 6953 7145 -499 7 654 2778 82 42 32 chrX 9052130 9052535 -157597761 - RLTR9E LTR ERVK 0 409 1 7 654 457 42 53 53 chrX 9052535 9052611 -157597685 - ETnERV2-int LTR ERVK 0 7406 7331 7 654 23265 137 33 46 chrX 9052822 9057438 -157592858 - ETnERV2-int LTR ERVK -977 6429 844 7 654 2183 26 63 3 chrX 9057439 9057756 -157592540 + RLTR1C LTR ERV1 1 336 -2963 7 654 4547 111 33 5 chrX 9058234 9058897 -157591399 + MMVL30-int LTR ERV1 772 1453 -2245 7 654 655 136 71 154 chrX 9058962 9059242 -157591054 + MMVL30-int LTR ERV1 960 1511 -2187 8 654 315 0 0 0 chrX 9059346 9059381 -157590915 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 654 360 0 0 0 chrX 9059387 9059427 -157590869 + (GA)n Simple_repeat Simple_repeat 1 40 0 8 654 15434 74 31 45 chrX 9059579 9061632 -157588664 + MMVL30-int LTR ERV1 1496 3584 -114 8 654 3244 66 2 10 chrX 9061632 9062031 -157588265 + MTA_Mm LTR MaLR 1 396 0 8 654 9136 58 5 4 chrX 9062031 9063128 -157587168 + MTA_Mm-int LTR MaLR 1 1098 0 8 654 3169 71 5 20 chrX 9063128 9063530 -157586766 + MTA_Mm LTR MaLR 1 396 0 8 654 15434 74 31 45 chrX 9063530 9063707 -157586589 + MMVL30-int LTR ERV1 3585 3696 -2 8 654 3600 70 8 6 chrX 9063707 9064194 -157586102 + RLTR1C LTR ERV1 1 488 -15 8 654 1793 126 123 63 chrX 9064210 9064592 -157585704 - ETnERV2-int LTR ERVK -5931 1475 1071 7 654 1030 223 151 57 chrX 9064607 9064959 -157585337 - ETnERV2-int LTR ERVK -2928 386 2 7 654 2923 96 25 12 chrX 9064960 9065362 -157584934 - RLTR9E LTR ERVK 0 409 3 7 654 551 341 17 42 chrX 9065364 9065652 -157584644 + Lx9 LINE L1 7208 7488 -156 8 654 473 326 27 32 chrX 9065881 9066068 -157584228 - LTR16A LTR ERVL -10 441 256 8 654 268 288 17 111 chrX 9066105 9066222 -157584074 - PB1D10 SINE Alu -9 108 3 8 654 189 0 0 0 chrX 9067486 9067507 -157582789 + (T)n Simple_repeat Simple_repeat 1 21 0 8 654 639 0 0 0 chrX 9067724 9067795 -157582501 + (TTTCC)n Simple_repeat Simple_repeat 1 71 0 8 654 751 277 140 37 chrX 9067868 9068517 -157581779 + L1M4 LINE L1 832 1547 -4995 8 654 1948 228 109 6 chrX 9068603 9069107 -157581189 + RLTR12A LTR ERVK 1 556 -12 9 654 874 267 66 4 chrX 9069114 9069340 -157580956 + MTEa LTR MaLR 137 376 -3 9 654 1078 262 0 0 chrX 9069342 9069552 -157580744 + B3 SINE B2 1 210 -6 9 654 228 308 35 103 chrX 9069664 9069702 -157580594 + PB1D7 SINE Alu 32 112 -8 9 654 328 163 0 0 chrX 9069702 9069751 -157580545 + ID_B1 SINE B4 168 216 -8 9 654 7251 118 24 9 chrX 9069837 9071539 -157578757 + Lx LINE L1 4924 6654 0 9 654 21 57 0 0 chrX 9071655 9071690 -157578606 + AT_rich Low_complexity Low_complexity 1 35 0 9 654 2712 130 142 17 chrX 9072018 9072534 -157577762 + RMER4B LTR ERVK 6 585 0 9 654 3005 177 87 68 chrX 9072677 9073403 -157576893 + RMER1B Other Other 326 1065 -1 9 654 497 60 15 0 chrX 9073419 9073486 -157576810 + ORR1D1 LTR MaLR 1 68 -306 9 654 2567 219 99 62 chrX 9073484 9074445 -157575851 - RMER17B LTR ERVK -4 904 1 1 654 1135 163 79 98 chrX 9074464 9074728 -157575568 + ORR1C2 LTR MaLR 87 345 -39 1 654 1444 259 28 18 chrX 9074728 9075022 -157575274 + ORR1C2-int LTR MaLR 3 291 -1079 1 654 339 85 0 0 chrX 9075022 9075069 -157575227 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 654 1444 259 28 18 chrX 9075069 9075163 -157575133 + ORR1C2-int LTR MaLR 292 394 -976 1 654 3260 165 31 14 chrX 9075359 9075911 -157574385 - RLTR31_Mm LTR ERVK 0 561 1 1 654 1925 181 32 50 chrX 9075912 9075935 -157574361 - RMER3D-int LTR ERVK -1 2841 2813 1 654 189 0 0 0 chrX 9075935 9075956 -157574340 + (CAA)n Simple_repeat Simple_repeat 2 22 0 1 654 1925 181 32 50 chrX 9075956 9076369 -157573927 - RMER3D-int LTR ERVK -30 2812 2414 1 654 244 231 200 0 chrX 9076414 9076479 -157573817 + ID4 SINE ID 5 82 -1 1 654 185 359 31 0 chrX 9076675 9076739 -157573557 - L2c LINE L2 -40 3347 3282 1 654 22 0 0 0 chrX 9076906 9076928 -157573368 + AT_rich Low_complexity Low_complexity 1 22 0 1 654 315 331 37 52 chrX 9076952 9077086 -157573210 - B1F1 SINE Alu 0 149 18 1 654 230 250 0 0 chrX 9077206 9077270 -157573026 + T-rich Low_complexity Low_complexity 1 64 0 1 654 2202 187 31 14 chrX 9078214 9078627 -157571669 + MTC LTR MaLR 1 420 -1 1 654 605 14 14 0 chrX 9078956 9079030 -157571266 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 654 41872 13 1 6 chrX 9080207 9086690 -157563606 - L1Md_A LINE L1 0 6582 227 1 654 863 140 279 15 chrX 9086684 9086892 -157563404 - Lx LINE L1 0 6654 6392 1 654 6085 87 25 1 chrX 9086885 9087798 -157562498 + Lx LINE L1 5440 6386 -268 1 654 702 281 30 118 chrX 9088626 9089026 -157561270 + MLT1B LTR MaLR 10 374 -16 1 654 594 335 45 25 chrX 9089318 9089563 -157560733 + B4A SINE B4 8 257 -35 1 654 540 318 29 17 chrX 9089690 9089863 -157560433 - MLT1H LTR MaLR -371 178 4 1 654 311 269 90 0 chrX 9089963 9090041 -157560255 + MLT1B LTR MaLR 289 373 -17 1 654 198 118 0 0 chrX 9090198 9090232 -157560064 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 654 200 250 62 0 chrX 9090288 9090336 -157559960 - L2 LINE L2 -1396 2023 1973 1 654 21 0 0 0 chrX 9090452 9090473 -157559823 + AT_rich Low_complexity Low_complexity 1 21 0 1 654 210 377 20 20 chrX 9090602 9090751 -157559545 - L2 LINE L2 -1817 1602 1454 1 654 335 272 141 23 chrX 9090957 9091085 -157559211 - MTE2b LTR MaLR -236 143 1 1 654 211 262 133 67 chrX 9091103 9091238 -157559058 + MIRb SINE MIR 58 201 -67 1 654 535 286 118 18 chrX 9091509 9091730 -157558566 - MLT1B LTR MaLR -8 382 140 1 654 285 151 0 0 chrX 9091962 9092015 -157558281 + (ATG)n Simple_repeat Simple_repeat 2 54 0 1 654 446 306 0 0 chrX 9092395 9092506 -157557790 - PB1D10 SINE Alu 0 117 7 1 654 221 288 0 70 chrX 9092456 9092527 -157557769 - B4A SINE B4 -151 141 76 1 654 1608 270 49 65 chrX 9092528 9093017 -157557279 - L1MB1 LINE L1 -91 6098 5622 1 654 1632 28 28 0 chrX 9093017 9093197 -157557099 - B2_Mm1t SINE B2 -7 186 2 1 654 1608 270 49 65 chrX 9093197 9093365 -157556931 - L1MB1 LINE L1 -568 5621 5452 1 654 235 91 0 0 chrX 9093392 9093425 -157556871 - U2 snRNA snRNA -155 33 1 1 654 247 104 154 13 chrX 9093425 9093503 -157556793 - L1MB1 LINE L1 -769 5371 5283 1 654 1193 76 7 0 chrX 9093517 9093661 -157556635 - B1_Mus2 SINE Alu -1 146 2 1 654 284 198 22 55 chrX 9093824 9093915 -157556381 - L1MB1 LINE L1 -840 5300 5213 1 654 336 24 0 0 chrX 9094143 9094184 -157556112 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 654 297 0 0 0 chrX 9094184 9094216 -157556080 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 654 357 193 109 0 chrX 9094404 9094523 -157555773 - L1MB1 LINE L1 -937 5203 5072 1 654 480 293 38 102 chrX 9095272 9095369 -157554927 - RLTR26 LTR ERVK -226 416 329 1 654 4309 66 60 8 chrX 9095369 9095901 -157554395 + LTRIS2 LTR ERV1 5 564 0 1 654 480 293 38 102 chrX 9095901 9096069 -157554227 - RLTR26 LTR ERVK -314 328 168 1 654 342 0 0 0 chrX 9097530 9097568 -157552728 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 654 358 280 56 102 chrX 9098441 9098637 -157551659 + MIR SINE MIR 8 201 -75 1 654 5854 37 0 0 chrX 9098723 9099373 -157550923 - L1Md_T LINE L1 -1 6581 5932 1 654 23567 25 0 0 chrX 9099373 9102128 -157548168 + L1Md_T LINE L1 3174 5929 -653 1 654 3806 113 49 21 chrX 9102385 9102956 -157547340 + Lx4A LINE L1 6460 7046 -12 1 654 21 36 0 0 chrX 9102958 9102986 -157547310 + AT_rich Low_complexity Low_complexity 1 28 0 1 654 229 185 15 15 chrX 9103054 9103120 -157547176 + GA-rich Low_complexity Low_complexity 2 67 0 1 654 214 167 0 0 chrX 9103136 9103172 -157547124 + GA-rich Low_complexity Low_complexity 1 36 0 1 654 1210 281 131 40 chrX 9103348 9104170 -157546126 - Lx7 LINE L1 -1540 6156 5253 1 654 307 317 42 0 chrX 9104264 9104384 -157545912 + L1M3e LINE L1 81 205 -6825 1 654 1364 245 19 67 chrX 9104393 9104769 -157545527 - ORR1D2 LTR MaLR -5 365 8 1 654 315 0 0 0 chrX 9105871 9105906 -157544390 + (TTTTTG)n Simple_repeat Simple_repeat 6 40 0 1 654 1032 71 28 21 chrX 9105906 9106049 -157544247 - B1_Mm SINE Alu 0 147 4 1 654 1555 272 112 32 chrX 9106879 9107185 -157543111 + L1M3e LINE L1 5446 5750 -1353 1 654 231 88 0 0 chrX 9107185 9107219 -157543077 + (CCA)n Simple_repeat Simple_repeat 2 35 0 1 654 1555 272 112 32 chrX 9107219 9107661 -157542635 + L1M3e LINE L1 5751 6254 -849 1 654 3272 286 24 22 chrX 9107718 9108654 -157541642 + Lx8 LINE L1 6225 7161 -312 1 654 532 296 35 90 chrX 9108855 9109167 -157541129 - MER33 DNA MER1_type -27 297 3 1 654 781 205 13 7 chrX 9109634 9109786 -157540510 - U1 snRNA snRNA -3 162 10 1 654 648 131 151 36 chrX 9109986 9110152 -157540144 + Lx4B LINE L1 6874 7058 0 1 654 30 27 0 0 chrX 9110157 9110194 -157540102 + AT_rich Low_complexity Low_complexity 1 37 0 1 654 663 247 47 24 chrX 9111351 9111521 -157538775 + RMER30 DNA MER1_type 9 182 -20 1 654 892 250 26 4 chrX 9111782 9112015 -157538281 + L1MA6 LINE L1 6038 6275 -25 1 654 256 255 0 0 chrX 9112032 9112083 -157538213 - PB1D9 SINE Alu -67 53 3 1 654 492 228 7 14 chrX 9112215 9112353 -157537943 - Lx6 LINE L1 -11 7449 7313 1 654 421 256 119 0 chrX 9112356 9112516 -157537780 - Lx7 LINE L1 -233 7463 7285 1 654 624 131 16 54 chrX 9112657 9112843 -157537453 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 654 411 21 0 0 chrX 9112844 9112892 -157537404 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 654 475 237 0 34 chrX 9112985 9113135 -157537161 + L1MA4A LINE L1 5780 5928 -375 1 654 35648 57 2 3 chrX 9114251 9115015 -157535281 - L1Md_F3 LINE L1 -864 5720 4962 1 654 2750 43 38 0 chrX 9115015 9115361 -157534935 + L1Md_F3 LINE L1 6225 6583 -1 1 654 35648 75 4 10 chrX 9115361 9120091 -157530205 - L1Md_F3 LINE L1 -922 4961 254 1 654 6268 76 1 0 chrX 9120091 9120891 -157529405 - L1_Mus1 LINE L1 -8 6559 5759 1 654 27111 108 7 98 chrX 9120896 9122675 -157527621 - L1_Mus1 LINE L1 -219 5664 4269 1 654 8140 50 5 0 chrX 9122675 9123664 -157526632 + L1Md_F2 LINE L1 5589 6582 0 1 654 27111 108 7 98 chrX 9123664 9124328 -157525968 - L1_Mus1 LINE L1 -1615 4268 3623 1 654 5920 91 1 1 chrX 9124328 9125123 -157525173 + L1_Mus1 LINE L1 5770 6564 -3 1 654 243 0 0 0 chrX 9125123 9125150 -157525146 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 654 27111 117 23 76 chrX 9125150 9128319 -157521977 - L1_Mus1 LINE L1 -2261 3622 437 1 654 390 184 0 0 chrX 9129640 9129716 -157520580 + (TA)n Simple_repeat Simple_repeat 1 76 0 1 654 299 225 180 0 chrX 9129761 9129850 -157520446 - ORR1D2 LTR MaLR -5 365 261 1 654 2227 201 43 2 chrX 9129852 9130291 -157520005 + Lx6 LINE L1 6978 7434 -26 1 654 225 315 45 18 chrX 9130306 9130416 -157519880 - ORR1D2 LTR MaLR -87 283 171 1 654 238 342 32 0 chrX 9130429 9130587 -157519709 + (CAGAG)n Simple_repeat Simple_repeat 4 166 0 1 654 213 348 32 0 chrX 9130599 9130757 -157519539 + (CAGAG)n Simple_repeat Simple_repeat 4 166 0 1 654 249 342 32 0 chrX 9130832 9131052 -157519244 + (CAGAG)n Simple_repeat Simple_repeat 1 226 0 1 654 299 325 34 84 chrX 9131052 9131230 -157519066 - ORR1D2 LTR MaLR -161 209 41 1 654 414 0 0 0 chrX 9131625 9131671 -157518625 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 654 988 266 59 44 chrX 9131779 9132117 -157518179 + MTE2a LTR MaLR 5 347 -32 1 654 180 0 0 0 chrX 9132667 9132687 -157517609 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 654 329 264 9 36 chrX 9132699 9132809 -157517487 + PB1D10 SINE Alu 4 110 -7 1 654 868 272 58 118 chrX 9133169 9133411 -157516885 + L1MA6 LINE L1 5547 5763 -537 1 654 3521 28 0 0 chrX 9133411 9133807 -157516489 + MTA_Mm LTR MaLR 1 396 0 1 654 9767 12 5 0 chrX 9133807 9134900 -157515396 + MTA_Mm-int LTR MaLR 1 1098 0 1 654 3587 18 0 0 chrX 9134900 9135296 -157515000 + MTA_Mm LTR MaLR 1 396 0 1 654 868 272 58 118 chrX 9135296 9135706 -157514590 + L1MA6 LINE L1 5764 6160 -140 1 654 493 211 114 0 chrX 9135708 9135831 -157514465 - B3 SINE B2 -60 156 20 1 654 485 174 31 47 chrX 9138122 9138249 -157512047 + YREP_Mm Unknown Unknown 8 132 -1680 1 654 4593 122 27 11 chrX 9138485 9139342 -157510954 + YREP_Mm Unknown Unknown 120 990 -822 1 654 406 254 50 42 chrX 9139516 9139635 -157510661 - B1F SINE Alu -1 148 29 1 654 230 370 11 0 chrX 9139874 9139966 -157510330 - Lx8 LINE L1 -208 7265 7173 1 654 273 278 148 0 chrX 9139980 9140088 -157510208 - Lx8 LINE L1 -268 7205 7082 1 654 558 267 107 74 chrX 9140527 9140708 -157509588 + MER2 DNA MER2_type 11 209 -136 1 654 419 309 8 0 chrX 9140708 9140831 -157509465 + PB1 SINE Alu 1 124 -3 1 654 558 267 107 74 chrX 9140831 9140948 -157509348 + MER2 DNA MER2_type 210 319 -26 1 654 834 215 66 5 chrX 9141570 9141766 -157508530 + B3 SINE B2 1 208 -8 1 654 347 17 16 48 chrX 9141905 9141968 -157508328 + (TTTTG)n Simple_repeat Simple_repeat 5 65 0 1 654 1060 82 0 0 chrX 9141968 9142103 -157508193 - B1_Mus1 SINE Alu -12 136 2 1 654 25915 41 175 5 chrX 9142128 9147373 -157502923 - L1Md_T LINE L1 0 6585 278 1 654 599 198 27 0 chrX 9148067 9148178 -157502118 + B1_Mur4 SINE Alu 29 142 -8 1 654 195 204 0 0 chrX 9148183 9148227 -157502069 + GA-rich Low_complexity Low_complexity 2 45 0 1 654 21 0 0 0 chrX 9148372 9148393 -157501903 + AT_rich Low_complexity Low_complexity 1 21 0 1 654 1879 140 99 0 chrX 9148398 9148720 -157501576 - Lx3B LINE L1 0 6973 6620 1 654 315 356 60 40 chrX 9149752 9149951 -157500345 - B4A SINE B4 -4 288 86 1 654 246 160 0 0 chrX 9150145 9150195 -157500101 + GA-rich Low_complexity Low_complexity 3 52 0 1 654 256 341 34 67 chrX 9150334 9150513 -157499783 + MLT1G1 LTR MaLR 377 549 -30 1 654 7610 50 2 6 chrX 9152476 9153427 -157496869 - L1Md_F2 LINE L1 0 6582 5665 1 654 21 0 0 0 chrX 9164125 9164146 -157486150 + AT_rich Low_complexity Low_complexity 1 21 0 1 654 5646 30 1 5 chrX 9164146 9164804 -157485492 - L1Md_F2 LINE L1 -3 6579 5924 1 654 38718 44 0 3 chrX 9166944 9173505 -157476791 - L1Md_T LINE L1 0 6585 1 1 654 2643 99 14 3 chrX 9174116 9174471 -157475825 + RLTR10D LTR ERVK 1 359 0 1 81 50333 64 29 13 chrX 9174471 9180910 -157469386 + IAP-d-int LTR ERVK 1 6542 0 1 655 2815 76 14 3 chrX 9180910 9181265 -157469031 + RLTR10D LTR ERVK 1 359 0 1 655 1761 127 83 166 chrX 9184606 9185124 -157465172 + IAPLTR2_Mm LTR ERVK 1 475 0 2 655 27118 81 7 159 chrX 9185987 9189744 -157460552 + L1Md_F2 LINE L1 382 4135 -1748 2 655 5230 90 60 99 chrX 9189744 9190673 -157459623 + RLTR13B1 LTR ERVK 1 893 0 2 655 27118 81 7 159 chrX 9190673 9192124 -157458172 + L1Md_F2 LINE L1 4136 5586 -297 2 655 8077 49 11 0 chrX 9192124 9193107 -157457189 + L1Md_F2 LINE L1 5587 6580 -2 2 655 2572 93 110 2 chrX 9195676 9196084 -157454212 - RLTR44E LTR ERVK 0 452 1 2 655 16567 56 2 10 chrX 9196089 9198295 -157452001 - RLTR44-int LTR ERVK -1 2811 816 2 655 849 117 151 16 chrX 9198563 9198741 -157451555 - RLTR44-int LTR ERVK -2509 303 1 2 655 2538 93 110 2 chrX 9198741 9199149 -157451147 - RLTR44E LTR ERVK 0 452 1 2 655 40955 18 2 6 chrX 9200151 9206338 -157443958 - L1Md_T LINE L1 0 6582 422 2 655 13047 65 0 7 chrX 9206337 9209145 -157441151 - L1Md_Gf LINE L1 -2958 2928 44 2 655 4392 26 0 0 chrX 9214319 9214812 -157435484 + MT2_Mm LTR ERVL 1 493 0 2 655 4302 102 33 106 chrX 9216152 9216962 -157433334 - RMER17A LTR ERVK 0 751 1 2 655 7689 55 42 4 chrX 9216963 9218292 -157432004 - RMER17A-int LTR ERVK -1 1727 1 2 655 4522 102 31 73 chrX 9218292 9219076 -157431220 - RMER17A LTR ERVK 0 751 1 2 655 3009 18 3 0 chrX 9219222 9219558 -157430738 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 655 4544 59 17 2 chrX 9219558 9220133 -157430163 + IAPEz-int LTR ERVK 8 591 -5890 2 655 460 66 0 32 chrX 9220165 9220228 -157430068 + IAPEz-int LTR ERVK 1359 1419 -5062 2 655 1872 111 4 4 chrX 9220217 9220479 -157429817 + IAPEz-int LTR ERVK 2236 2497 -5183 2 655 934 88 24 0 chrX 9220474 9220599 -157429697 + IAPEz-int LTR ERVK 4783 4910 -2770 2 655 21365 13 2 2 chrX 9220601 9222960 -157427336 + IAPEz-int LTR ERVK 4123 6481 0 2 655 2992 18 3 0 chrX 9222960 9223296 -157427000 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 655 986 72 0 0 chrX 9228262 9228401 -157421895 - B1_Mus1 SINE Alu -2 146 8 2 655 316 333 0 0 chrX 9228650 9228734 -157421562 + G-rich Low_complexity Low_complexity 5 88 0 2 655 277 319 49 14 chrX 9228814 9228957 -157421339 + Charlie8 DNA MER1_type 108 255 -2173 2 655 228 276 164 7 chrX 9229034 9229180 -157421116 + MLT1D LTR MaLR 2 170 -335 2 655 777 201 91 41 chrX 9229438 9229635 -157420661 + B3 SINE B2 1 207 -9 2 655 1229 238 65 76 chrX 9229666 9230126 -157420170 - RLTR28B LTR ERVL -3 478 24 2 655 24 32 0 0 chrX 9231887 9231918 -157418378 + AT_rich Low_complexity Low_complexity 1 31 0 2 655 402 74 0 0 chrX 9233255 9233309 -157416987 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 655 186 211 75 19 chrX 9235205 9235258 -157415038 + L2b LINE L2 3309 3364 -11 2 655 603 139 0 0 chrX 9235507 9235608 -157414688 + (TTTC)n Simple_repeat Simple_repeat 1 101 0 2 655 1060 97 0 7 chrX 9235608 9235754 -157414542 - B1_Mus1 SINE Alu -1 147 3 2 655 516 208 96 0 chrX 9235754 9235879 -157414417 + B1_Mur3 SINE Alu 13 149 0 2 655 257 37 35 53 chrX 9235890 9235947 -157414349 + (CAAAA)n Simple_repeat Simple_repeat 3 58 0 2 655 275 291 68 8 chrX 9236339 9236446 -157413850 + PB1 SINE Alu 1 115 -12 2 655 234 0 0 0 chrX 9236446 9236472 -157413824 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 2 655 200 93 47 0 chrX 9236563 9236606 -157413690 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 2 655 289 222 55 14 chrX 9236813 9236886 -157413410 + LTR79 LTR ERVL 68 143 -384 2 655 235 340 69 10 chrX 9237079 9237180 -157413116 + LTR79 LTR ERVL 385 491 -36 2 655 21 0 0 0 chrX 9237350 9237371 -157412925 + AT_rich Low_complexity Low_complexity 1 21 0 2 655 324 0 0 0 chrX 9237595 9237631 -157412665 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 655 265 300 8 68 chrX 9240682 9240800 -157409496 - MLT1D LTR MaLR -394 111 1 2 655 691 245 58 11 chrX 9241050 9241240 -157409056 + B3 SINE B2 1 199 -17 2 655 467 252 222 0 chrX 9241692 9241827 -157408469 + B4A SINE B4 109 273 -19 2 655 2886 47 103 3 chrX 9242036 9242396 -157407900 - MTA_Mm LTR MaLR 0 396 1 2 655 7736 93 29 10 chrX 9242461 9243999 -157406297 - L1_Mus3 LINE L1 0 6638 5054 2 655 261 282 38 8 chrX 9244209 9244341 -157405955 + L1MEg LINE L1 858 993 -5249 2 655 589 292 0 73 chrX 9244412 9244645 -157405651 + B3 SINE B2 1 216 0 2 655 639 187 0 73 chrX 9244657 9244807 -157405489 + B1_Mur1 SINE Alu 3 141 -8 2 655 407 308 0 0 chrX 9244833 9244937 -157405359 + Lx7 LINE L1 7123 7226 -470 2 655 2043 55 0 0 chrX 9244937 9245191 -157405105 + L1Md_F2 LINE L1 6319 6572 -10 2 655 209 183 20 70 chrX 9245257 9245357 -157404939 + (TTTG)n Simple_repeat Simple_repeat 4 98 0 2 655 221 176 0 13 chrX 9245357 9245432 -157404864 + GA-rich Low_complexity Low_complexity 1 74 0 2 655 22 0 0 0 chrX 9245528 9245550 -157404746 + AT_rich Low_complexity Low_complexity 1 22 0 2 655 1163 216 105 42 chrX 9245806 9246139 -157404157 - MTE2b LTR MaLR -4 375 22 2 655 395 295 9 9 chrX 9246829 9246935 -157403361 + B1F SINE Alu 43 148 -1 2 655 246 215 46 0 chrX 9246998 9247063 -157403233 - MLT2C2 LTR ERVL -4 555 488 2 655 1525 202 129 70 chrX 9247115 9247542 -157402754 - MT2A LTR ERVL -72 461 10 2 655 391 302 0 41 chrX 9247435 9247556 -157402740 - MTE2b LTR MaLR -263 116 1 2 655 234 288 85 0 chrX 9247582 9247641 -157402655 + ID4_ SINE ID 2 65 -18 2 655 405 0 0 0 chrX 9247648 9247693 -157402603 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 655 1183 75 0 0 chrX 9247874 9248021 -157402275 + B1_Mm SINE Alu 1 147 0 2 655 288 0 0 0 chrX 9248028 9248060 -157402236 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 655 228 219 79 50 chrX 9248816 9248862 -157401434 + L1MEg LINE L1 2198 2246 -3900 2 655 369 0 0 0 chrX 9248862 9248903 -157401393 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 655 228 219 79 50 chrX 9248903 9248957 -157401339 + L1MEg LINE L1 2247 2301 -3845 2 655 1201 202 171 117 chrX 9248973 9249528 -157400768 - RMER4B LTR ERVK 0 585 1 2 655 442 301 75 8 chrX 9249818 9249952 -157400344 - RSINE1 SINE B4 -20 145 3 2 655 3182 51 185 2 chrX 9250125 9250558 -157399738 - RLTR1B LTR ERV1 0 512 1 2 655 63970 46 2 10 chrX 9250558 9253490 -157396806 - MMERGLN-int LTR ERV1 0 7556 4672 2 655 2207 46 0 0 chrX 9253490 9253751 -157396545 - L1Md_A LINE L1 0 6582 6322 2 655 63970 46 2 10 chrX 9253751 9258435 -157391861 - MMERGLN-int LTR ERV1 -2885 4671 1 2 655 3267 53 177 2 chrX 9258435 9258871 -157391425 - RLTR1B LTR ERV1 0 512 1 2 655 4886 178 9 23 chrX 9259146 9260067 -157390229 - RMER13B LTR ERVK 0 908 1 2 655 587 160 0 9 chrX 9260229 9260336 -157389960 - URR1B DNA MER1_type -2 223 118 2 655 1142 286 105 16 chrX 9260346 9260793 -157389503 - Lx8 LINE L1 -268 7205 6719 2 655 438 287 168 26 chrX 9260794 9261169 -157389127 + Lx8 LINE L1 6160 6580 -1064 2 655 250 190 17 17 chrX 9261186 9261245 -157389051 + Lx8 LINE L1 6678 6736 -908 2 655 589 235 15 7 chrX 9261257 9261394 -157388902 - B1F SINE Alu -7 142 5 2 655 26 30 0 0 chrX 9261609 9261642 -157388654 + AT_rich Low_complexity Low_complexity 1 33 0 2 655 501 214 38 82 chrX 9262002 9262160 -157388136 + Lx7 LINE L1 7265 7415 -281 2 655 515 200 21 49 chrX 9262219 9262361 -157387935 + Lx7 LINE L1 7559 7696 0 2 655 961 209 5 56 chrX 9262828 9263041 -157387255 - B3 SINE B2 -14 202 1 2 655 448 301 65 52 chrX 9263529 9263760 -157386536 + RMER2 LTR ERV1 334 567 0 2 655 633 222 58 19 chrX 9264171 9264378 -157385918 + B3 SINE B2 2 216 0 2 655 453 19 0 0 chrX 9264572 9264626 -157385670 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 655 215 79 26 0 chrX 9264936 9264974 -157385322 + (TTA)n Simple_repeat Simple_repeat 3 41 0 2 655 225 83 0 0 chrX 9265554 9265590 -157384706 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2 655 5723 50 1 21 chrX 9266154 9266873 -157383423 + L1Md_F2 LINE L1 5865 6569 -13 2 655 322 353 50 99 chrX 9267827 9268069 -157382227 + MTEa LTR MaLR 22 251 -128 2 655 23 0 0 0 chrX 9268325 9268348 -157381948 + AT_rich Low_complexity Low_complexity 1 23 0 2 655 456 19 0 0 chrX 9269192 9269245 -157381051 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 655 954 177 6 13 chrX 9269695 9270166 -157380130 + CT-rich Low_complexity Low_complexity 1 468 0 2 655 218 39 0 0 chrX 9270166 9270192 -157380104 + (TTTC)n Simple_repeat Simple_repeat 4 29 0 2 655 518 235 12 12 chrX 9270192 9270220 -157380076 + polypyrimidine Low_complexity Low_complexity 147 174 0 2 655 1003 132 11 0 chrX 9270220 9270394 -157379902 + (TTC)n Simple_repeat Simple_repeat 2 177 0 2 655 837 192 15 5 chrX 9270394 9270707 -157379589 + CT-rich Low_complexity Low_complexity 1 316 0 2 655 430 53 18 0 chrX 9270707 9270764 -157379532 + (TTTC)n Simple_repeat Simple_repeat 4 61 0 2 655 1167 70 6 12 chrX 9270764 9270937 -157379359 + (TTC)n Simple_repeat Simple_repeat 3 174 0 2 655 271 323 95 78 chrX 9271546 9271788 -157378508 - MLT1H LTR MaLR -182 367 122 2 655 450 225 208 0 chrX 9272040 9272160 -157378136 + B1_Mur1 SINE Alu 4 148 -1 2 655 744 262 69 5 chrX 9272170 9272373 -157377923 + B3 SINE B2 1 216 0 2 655 280 325 113 32 chrX 9274093 9274341 -157375955 + L1MCa LINE L1 6 273 -5772 2 655 1058 129 60 22 chrX 9274379 9274561 -157375735 - B2_Mm2 SINE B2 -5 190 2 2 655 216 0 0 0 chrX 9274585 9274609 -157375687 + (A)n Simple_repeat Simple_repeat 1 24 0 2 655 271 338 0 0 chrX 9274618 9274695 -157375601 + ID4_ SINE ID 3 79 -4 2 655 233 246 31 0 chrX 9274744 9274809 -157375487 + L1MCa LINE L1 817 883 -5162 2 655 360 59 0 0 chrX 9274811 9274862 -157375434 + (TATG)n Simple_repeat Simple_repeat 2 52 0 2 655 1047 122 0 0 chrX 9274862 9275018 -157375278 - B2_Mm2 SINE B2 -38 157 2 2 655 340 271 0 34 chrX 9275116 9275204 -157375092 - RMER1B Other Other -791 275 191 2 655 3118 231 52 31 chrX 9275190 9275949 -157374347 + RMER1C Other Other 230 1325 -17 2 655 503 322 46 23 chrX 9275967 9276186 -157374110 + ID_B1 SINE B4 1 224 0 2 655 186 43 0 0 chrX 9276190 9276213 -157374083 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 2 655 359 242 84 0 chrX 9276275 9276370 -157373926 + B3 SINE B2 3 105 -111 2 655 445 289 40 52 chrX 9276469 9276717 -157373579 + L1MCa LINE L1 1150 1394 -5357 2 655 247 303 23 76 chrX 9277319 9277451 -157372845 - MLT1J-int LTR MaLR -788 599 475 2 655 313 312 0 31 chrX 9277504 9277600 -157372696 + PB1D10 SINE Alu 5 97 -20 2 655 1037 252 63 63 chrX 9277830 9278339 -157371957 + Lx9 LINE L1 7123 7631 -13 2 655 2790 67 0 26 chrX 9278592 9278973 -157371323 + L1Md_F2 LINE L1 6200 6570 -12 2 655 729 327 73 14 chrX 9279028 9279385 -157370911 + MER63D DNA AcHobo 2 379 -682 2 655 405 313 15 49 chrX 9279382 9279590 -157370706 - MLT1J LTR MaLR -275 173 11 2 655 397 235 78 39 chrX 9280061 9280163 -157370133 + PB1D9 SINE Alu 9 115 -5 2 655 597 266 7 0 chrX 9280777 9280920 -157369376 + B1F1 SINE Alu 1 144 -5 3 655 11965 66 9 7 chrX 9280920 9283267 -157367029 - L1Md_F2 LINE L1 -14 6568 4214 3 655 28594 57 84 6 chrX 9283262 9288328 -157361968 - L1Md_A LINE L1 -1 6581 1095 3 655 8094 26 1 1 chrX 9288329 9289414 -157360882 - L1Md_A LINE L1 0 6582 5498 3 655 10987 19 1 0 chrX 9289406 9290743 -157359553 + L1Md_A LINE L1 4150 5487 -396 3 655 2227 102 75 1 chrX 9290740 9291202 -157359094 - L1Md_A LINE L1 -5605 1119 217 3 655 754 290 0 42 chrX 9291335 9291526 -157358770 - B3 SINE B2 -29 187 5 3 655 2243 144 19 6 chrX 9291563 9291925 -157358371 + ORR1B2 LTR MaLR 1 367 0 3 655 200 200 0 43 chrX 9292067 9292114 -157358182 + T-rich Low_complexity Low_complexity 6 50 0 3 655 1097 136 95 5 chrX 9292840 9293040 -157357256 - L1_Mus3 LINE L1 -2 6636 6419 3 655 270 0 0 0 chrX 9293989 9294019 -157356277 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 655 633 123 0 0 chrX 9294648 9294754 -157355542 + (TGGA)n Simple_repeat Simple_repeat 3 108 0 3 655 678 184 79 8 chrX 9295285 9295411 -157354885 - B1_Mur1 SINE Alu -2 147 13 3 655 36566 12 3 7 chrX 9295539 9300939 -157349357 + L1Md_A LINE L1 216 5586 -297 3 655 8900 11 0 0 chrX 9300939 9301935 -157348361 + L1Md_A LINE L1 5587 6582 0 3 655 1018 243 0 0 chrX 9301954 9302143 -157348153 - B3 SINE B2 -12 204 16 3 655 180 0 0 0 chrX 9302283 9302303 -157347993 + (T)n Simple_repeat Simple_repeat 1 20 0 3 655 1058 186 18 37 chrX 9302446 9302624 -157347672 + B3 SINE B2 2 176 -40 3 655 3725 68 75 0 chrX 9302624 9303107 -157347189 + MURVY-LTR LTR ERV1 1 519 0 3 655 1058 186 18 37 chrX 9303107 9303146 -157347150 + B3 SINE B2 177 215 -1 3 655 254 219 16 0 chrX 9303387 9303451 -157346845 + Lx8 LINE L1 7186 7250 -223 3 655 1302 7 0 0 chrX 9303514 9303661 -157346635 + (TCTCCC)n Simple_repeat Simple_repeat 5 151 0 3 655 444 19 0 0 chrX 9303661 9303713 -157346583 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 655 416 299 28 55 chrX 9303915 9304060 -157346236 + B1F SINE Alu 1 141 -8 3 655 1014 255 88 43 chrX 9304291 9304782 -157345514 + L1MB8 LINE L1 5600 6112 -66 3 655 492 18 0 0 chrX 9304834 9304891 -157345405 + (ATATG)n Simple_repeat Simple_repeat 5 61 0 3 655 2699 58 0 0 chrX 9305570 9305918 -157344378 - L1_Mus1 LINE L1 -100 6467 6120 3 656 206 77 0 49 chrX 9306122 9306163 -157344133 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 656 311 311 8 48 chrX 9306539 9306664 -157343632 + MLT2B2 LTR ERVL 431 550 -12 3 656 317 304 9 35 chrX 9306971 9307073 -157343223 + polypyrimidine Low_complexity Low_complexity 17 116 0 3 656 1244 113 27 0 chrX 9307073 9307258 -157343038 - B2_Mm2 SINE B2 -4 191 2 3 656 317 304 9 35 chrX 9307258 9307271 -157343025 + polypyrimidine Low_complexity Low_complexity 4 16 0 3 656 4758 62 2 11 chrX 9307998 9308623 -157341673 - L1Md_F2 LINE L1 0 6582 5964 3 656 306 289 115 40 chrX 9308676 9308824 -157341472 + MLT1H LTR MaLR 2 160 -389 3 656 285 358 84 96 chrX 9308858 9309192 -157341104 + MLT1H LTR MaLR 218 547 -2 3 656 380 298 103 16 chrX 9309344 9309470 -157340826 + RSINE1 SINE B4 3 139 -26 3 656 459 0 0 0 chrX 9309470 9309521 -157340775 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 656 264 261 0 0 chrX 9309523 9309653 -157340643 + GA-rich Low_complexity Low_complexity 1 130 0 3 656 206 148 49 12 chrX 9309868 9309950 -157340346 + (TATAA)n Simple_repeat Simple_repeat 5 89 0 3 656 711 250 7 14 chrX 9310157 9310299 -157339997 - B1_Mur1 SINE Alu 0 149 9 3 656 331 355 32 103 chrX 9310159 9310344 -157339952 - B4 SINE B4 -68 224 53 3 656 1127 197 5 19 chrX 9310722 9310934 -157339362 + B3 SINE B2 4 212 -4 3 656 942 262 134 41 chrX 9311255 9311597 -157338699 + MTEa LTR MaLR 6 379 0 3 656 380 331 25 25 chrX 9311629 9311787 -157338509 - MLT1A LTR MaLR -2 372 215 3 656 280 250 37 24 chrX 9312323 9312405 -157337891 - MLT1A LTR MaLR -325 83 1 3 656 338 293 61 46 chrX 9312755 9312965 -157337331 - MIRb SINE MIR -1 267 34 3 656 224 100 0 24 chrX 9313028 9313069 -157337227 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 656 695 264 7 13 chrX 9313077 9313227 -157337069 - B3 SINE B2 -65 151 3 3 656 816 219 112 0 chrX 9314127 9314314 -157335982 + B3 SINE B2 9 216 0 3 656 290 299 9 85 chrX 9314530 9314636 -157335660 + L2a LINE L2 3322 3419 -7 3 656 509 340 24 0 chrX 9314619 9314825 -157335471 - L2a LINE L2 -14 3412 3202 3 656 209 368 48 8 chrX 9315008 9315134 -157335162 - L2a LINE L2 -445 2974 2844 3 656 239 0 32 0 chrX 9315258 9315289 -157335007 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 3 656 2156 27 114 0 chrX 9315386 9315648 -157334648 - RLTR10B LTR ERVK 0 292 1 3 656 353 376 57 20 chrX 9315651 9315898 -157334398 - L2a LINE L2 -660 2759 2504 3 656 757 289 5 50 chrX 9315903 9316121 -157334175 + B3A SINE B2 1 205 -11 3 656 24 32 0 0 chrX 9316123 9316154 -157334142 + AT_rich Low_complexity Low_complexity 1 31 0 3 656 543 209 0 83 chrX 9316185 9316305 -157333991 - B3 SINE B2 -82 134 25 3 656 21 0 0 0 chrX 9316311 9316332 -157333964 + AT_rich Low_complexity Low_complexity 1 21 0 3 656 188 401 78 15 chrX 9316332 9316537 -157333759 - L2a LINE L2 -914 2505 2288 3 656 291 275 0 12 chrX 9316926 9317007 -157333289 + Tigger9a DNA Tigger 580 659 -73 3 656 3046 69 5 2 chrX 9317095 9317488 -157332808 + MTA_Mm LTR MaLR 1 394 -2 3 656 7458 70 26 75 chrX 9317490 9318644 -157331652 + MTA_Mm-int LTR MaLR 1 1098 0 3 656 2994 81 8 2 chrX 9318644 9319042 -157331254 + MTA_Mm LTR MaLR 1 400 0 3 656 320 287 147 54 chrX 9320539 9320668 -157329628 + MLT1K LTR MaLR 157 297 -298 3 656 510 158 36 27 chrX 9320982 9321093 -157329203 - RMER1C Other Other -1 1341 1230 3 656 1379 67 5 25 chrX 9321100 9321300 -157328996 - L1Md_F2 LINE L1 -1 6581 6386 3 656 4234 61 0 2 chrX 9321303 9322031 -157328265 + L1Md_F2 LINE L1 5318 6043 -539 3 656 847 273 9 19 chrX 9322061 9322274 -157328022 - B3 SINE B2 -5 211 1 3 656 241 250 40 27 chrX 9322534 9322608 -157327688 - ORR1D2 LTR MaLR -5 365 291 3 656 237 253 89 33 chrX 9322805 9322895 -157327401 - MLT1A1 LTR MaLR -313 95 1 3 656 675 182 443 16 chrX 9323007 9323255 -157327041 - Lx5 LINE L1 0 7058 6714 3 656 291 254 79 95 chrX 9323795 9323810 -157326486 + MT2B LTR ERVL 152 198 -403 3 656 519 178 11 0 chrX 9323810 9323900 -157326396 + PB1D9 SINE Alu 1 91 -29 3 656 291 254 79 95 chrX 9323900 9323921 -157326375 + MT2B LTR ERVL 199 275 -326 3 656 277 333 0 0 chrX 9323942 9324008 -157326288 - B1F1 SINE Alu -83 66 1 3 656 288 53 0 0 chrX 9325059 9325097 -157325199 + (TGGGGG)n Simple_repeat Simple_repeat 3 40 0 3 656 261 57 0 0 chrX 9325656 9325691 -157324605 + (T)n Simple_repeat Simple_repeat 1 35 0 3 656 23 33 0 0 chrX 9326539 9326569 -157323727 + AT_rich Low_complexity Low_complexity 1 30 0 3 656 318 331 26 26 chrX 9328058 9328210 -157322086 + MER5B DNA MER1_type 2 153 -25 3 656 978 355 21 8 chrX 9328232 9328612 -157321684 - MLT1B LTR MaLR -4 386 2 3 656 230 332 124 0 chrX 9328637 9328775 -157321521 - MER5A1 DNA MER1_type -3 163 9 3 656 654 295 21 16 chrX 9328794 9328980 -157321316 - MER5A DNA MER1_type 0 189 3 3 656 694 276 28 45 chrX 9329702 9329880 -157320416 - B3A SINE B2 -23 175 1 3 656 664 328 92 47 chrX 9330129 9330574 -157319722 + MamRep605 Unknown Unknown 316 780 -96 3 656 346 310 123 31 chrX 9330586 9330749 -157319547 - MIRb SINE MIR -18 250 73 3 656 28 29 0 0 chrX 9330749 9330784 -157319512 + AT_rich Low_complexity Low_complexity 1 35 0 3 656 358 333 89 83 chrX 9330923 9331250 -157319046 + MLT1J LTR MaLR 2 330 -182 3 656 206 200 0 0 chrX 9331476 9331511 -157318785 + MIR SINE MIR 52 86 -176 3 656 540 0 0 0 chrX 9331548 9331608 -157318688 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 3 656 3357 35 2 2 chrX 9331608 9332003 -157318293 + MTA_Mm LTR MaLR 2 396 0 3 656 465 19 0 0 chrX 9332003 9332057 -157318239 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 3 656 543 253 69 58 chrX 9332127 9332422 -157317874 - RSINE1 SINE B4 -14 278 2 3 656 229 171 0 0 chrX 9333141 9333176 -157317120 + PB1D9 SINE Alu 79 113 -7 3 656 760 239 23 79 chrX 9333183 9333334 -157316962 - Charlie4 DNA MER1_type -1728 233 84 3 656 4364 64 0 2 chrX 9333334 9333884 -157316412 + L1_Mus1 LINE L1 6019 6567 0 3 656 760 239 23 79 chrX 9333884 9333946 -157316350 - Charlie4 DNA MER1_type -1878 83 32 3 656 248 288 9 35 chrX 9334003 9334118 -157316178 - Lx7 LINE L1 0 7696 7585 3 656 315 250 95 0 chrX 9334264 9334348 -157315948 - Lx7 LINE L1 -398 7298 7207 3 656 221 175 0 0 chrX 9334426 9334466 -157315830 + A-rich Low_complexity Low_complexity 1 40 0 3 656 22 70 0 0 chrX 9334630 9334673 -157315623 + AT_rich Low_complexity Low_complexity 1 43 0 3 656 1415 197 106 4 chrX 9334677 9334952 -157315344 - Lx6 LINE L1 -246 7214 6912 3 656 316 151 0 0 chrX 9334958 9335011 -157315285 - B1F2 SINE Alu -89 60 8 3 656 599 0 13 0 chrX 9335010 9335086 -157315210 + B1_Mus2 SINE Alu 71 147 0 3 656 740 42 10 0 chrX 9335088 9335184 -157315112 + (GAGAA)n Simple_repeat Simple_repeat 4 100 0 3 656 2474 199 52 35 chrX 9335189 9335731 -157314565 - Lx6 LINE L1 -561 6899 6349 3 656 6209 202 8 45 chrX 9335707 9335863 -157314433 - Lx6 LINE L1 -1514 5946 5786 3 656 326 42 0 20 chrX 9335863 9335912 -157314384 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 3 656 1212 28 0 0 chrX 9335917 9336058 -157314238 - B1_Mm SINE Alu -6 141 1 3 656 6209 211 18 89 chrX 9336058 9337693 -157312603 - Lx6 LINE L1 -92 5785 4265 3 656 1455 283 32 15 chrX 9337720 9338125 -157312171 - Lx5 LINE L1 -41 7009 6598 3 656 535 128 0 0 chrX 9338125 9338211 -157312085 - L1_Mur3 LINE L1 -1603 4277 4192 3 656 543 202 0 0 chrX 9338216 9338335 -157311961 + (TA)n Simple_repeat Simple_repeat 1 119 0 3 656 1956 140 45 32 chrX 9338335 9338712 -157311584 - L1_Mur3 LINE L1 -1681 4199 3818 3 656 256 204 0 36 chrX 9338767 9338823 -157311473 - B4 SINE B4 -145 147 94 3 656 351 0 0 0 chrX 9339238 9339277 -157311019 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 3 656 3468 32 0 0 chrX 9339411 9339822 -157310474 - L1Md_T LINE L1 0 6582 6172 3 656 191 36 0 35 chrX 9339842 9339871 -157310425 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 3 656 884 248 5 10 chrX 9339878 9340078 -157310218 - B3 SINE B2 -16 200 2 4 656 1604 265 97 59 chrX 9340414 9341145 -157309151 - L1MC3 LINE L1 -17 7768 7010 4 656 630 272 37 43 chrX 9341497 9341535 -157308761 - B3A SINE B2 -11 187 156 4 656 437 50 17 0 chrX 9341535 9341595 -157308701 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 656 630 272 37 43 chrX 9341595 9341744 -157308552 - B3A SINE B2 -43 155 1 4 656 572 340 74 64 chrX 9342093 9342470 -157307826 + MLT1H LTR MaLR 22 402 -147 4 656 454 150 20 10 chrX 9342777 9342878 -157307418 + (TATATG)n Simple_repeat Simple_repeat 4 105 0 4 656 254 224 26 26 chrX 9342888 9342966 -157307330 + (TA)n Simple_repeat Simple_repeat 1 78 0 4 656 1862 181 3 6 chrX 9343306 9343640 -157306656 - Lx4B LINE L1 0 7058 6726 4 656 180 0 0 0 chrX 9343919 9343939 -157306357 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 656 213 114 0 0 chrX 9343941 9343962 -157306334 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 656 345 24 0 0 chrX 9343962 9344004 -157306292 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 656 213 114 0 0 chrX 9344004 9344017 -157306279 + (TG)n Simple_repeat Simple_repeat 1 13 0 4 656 323 290 178 6 chrX 9346057 9346220 -157304076 - MIR SINE MIR -70 192 2 4 656 445 263 64 21 chrX 9348319 9348459 -157301837 - RMER15 LTR ERVL -4 571 426 4 656 324 329 202 0 chrX 9348470 9348628 -157301668 - Lx8 LINE L1 -221 7252 7063 4 656 289 321 0 45 chrX 9349063 9349151 -157301145 - MER94 DNA AcHobo -26 108 25 4 656 292 283 80 0 chrX 9349202 9349315 -157300981 - L1MA5A LINE L1 -1 6296 6175 4 656 243 346 39 29 chrX 9349330 9349434 -157300862 - B1_Mus1 SINE Alu -43 105 1 4 656 407 325 56 38 chrX 9349671 9349700 -157300596 - RSINE1 SINE B4 -1 164 141 4 656 225 65 0 0 chrX 9349700 9349731 -157300565 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 656 407 325 56 38 chrX 9349731 9349861 -157300435 - RSINE1 SINE B4 -25 140 2 4 656 1212 189 0 0 chrX 9350689 9350901 -157299395 + B3 SINE B2 4 215 -1 4 656 237 322 86 17 chrX 9351366 9351483 -157298813 + MLT1J LTR MaLR 1 125 -387 4 656 325 273 0 0 chrX 9351528 9351605 -157298691 - PB1D10 SINE Alu -35 82 6 4 656 358 351 161 33 chrX 9351608 9351788 -157298508 + MLT1J LTR MaLR 192 394 -118 4 656 276 259 59 0 chrX 9352165 9352250 -157298046 - MLT1H LTR MaLR -454 95 6 4 656 187 380 87 0 chrX 9352708 9352800 -157297496 + L2a LINE L2 3316 3415 -11 4 656 318 271 186 0 chrX 9352808 9352926 -157297370 + Lx8 LINE L1 7087 7226 -247 4 656 225 296 0 0 chrX 9352928 9352982 -157297314 + Lx8 LINE L1 7165 7218 -255 4 656 346 280 18 61 chrX 9352982 9353096 -157297200 + RMER15 LTR ERVL 362 470 -105 4 656 472 188 276 10 chrX 9353220 9353416 -157296880 - MTD LTR MaLR -121 286 39 4 656 567 193 8 16 chrX 9353644 9353765 -157296531 - PB1D9 SINE Alu 0 120 1 4 656 456 19 0 0 chrX 9354029 9354082 -157296214 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 656 483 18 0 0 chrX 9354159 9354215 -157296081 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 656 406 221 94 19 chrX 9354216 9354322 -157295974 - B1_Mur2 SINE Alu -11 138 25 4 656 801 245 19 14 chrX 9354344 9354559 -157295737 - B3 SINE B2 0 216 1 4 656 22 0 0 0 chrX 9354569 9354591 -157295705 + AT_rich Low_complexity Low_complexity 1 22 0 4 656 7686 58 1 5 chrX 9356301 9357557 -157292739 - L1Md_F2 LINE L1 -2 6580 5333 4 656 369 0 0 0 chrX 9357901 9357942 -157292354 + (CAA)n Simple_repeat Simple_repeat 2 42 0 4 656 446 301 45 45 chrX 9357950 9358197 -157292099 + L1M4c LINE L1 523 769 -6135 4 656 317 331 74 8 chrX 9358632 9358754 -157291542 + L1M4c LINE L1 1097 1226 -5678 4 656 233 302 8 117 chrX 9358895 9359015 -157291281 + ID_B1 SINE B4 116 222 -2 4 656 492 232 36 0 chrX 9359058 9359170 -157291126 + PB1D7 SINE Alu 3 118 -2 4 656 489 34 0 0 chrX 9359170 9359229 -157291067 + (GGA)n Simple_repeat Simple_repeat 3 61 0 4 656 373 299 22 48 chrX 9359288 9359525 -157290771 + L1M4c LINE L1 2301 2568 -4519 4 656 337 297 87 19 chrX 9359674 9359777 -157290519 + B1F2 SINE Alu 2 111 -38 4 656 774 268 32 16 chrX 9359908 9360283 -157290013 + L1M4c LINE L1 2793 3182 -3824 4 656 907 274 15 19 chrX 9360311 9360582 -157289714 + B4A SINE B4 4 273 -19 4 656 239 276 0 106 chrX 9361032 9361117 -157289179 - B4 SINE B4 -1 291 216 4 656 297 128 0 0 chrX 9361183 9361230 -157289066 + (T)n Simple_repeat Simple_repeat 1 47 0 4 656 303 294 275 24 chrX 9361237 9361576 -157288720 + MLT1E2 LTR MaLR 148 571 -53 4 656 225 0 0 0 chrX 9362007 9362032 -157288264 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 656 351 0 0 0 chrX 9362032 9362070 -157288226 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 656 390 57 0 0 chrX 9362417 9362470 -157287826 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 656 795 195 0 0 chrX 9362704 9362832 -157287464 + B3 SINE B2 2 129 -87 4 656 240 35 0 0 chrX 9362845 9362874 -157287422 + (TAAAA)n Simple_repeat Simple_repeat 5 33 0 4 656 845 238 47 28 chrX 9363182 9363394 -157286902 - B3 SINE B2 0 216 1 4 656 309 219 39 52 chrX 9364994 9365071 -157285225 - HAL1-3A_ME LINE L1 -808 2050 1975 4 656 395 288 37 200 chrX 9365431 9365643 -157284653 + MTEb LTR MaLR 13 199 -180 4 656 267 54 0 0 chrX 9365643 9365680 -157284616 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 656 395 288 37 200 chrX 9365680 9365791 -157284505 + MTEb LTR MaLR 200 272 -107 4 656 351 0 0 0 chrX 9365791 9365830 -157284466 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 4 656 395 288 37 200 chrX 9365830 9365935 -157284361 + MTEb LTR MaLR 273 372 -7 4 656 244 344 10 79 chrX 9366042 9366143 -157284153 + LTR16C LTR ERVL 176 269 -220 4 656 25 0 0 0 chrX 9367759 9367784 -157282512 + GC_rich Low_complexity Low_complexity 1 25 0 4 656 572 251 39 55 chrX 9367940 9368121 -157282175 + MTD LTR MaLR 242 419 0 4 656 579 298 116 14 chrX 9368310 9368586 -157281710 - Lx9 LINE L1 -238 7406 7103 4 656 29 80 0 11 chrX 9370219 9370239 -157280057 + AT_rich Low_complexity Low_complexity 1 20 0 4 656 962 245 15 0 chrX 9370239 9370435 -157279861 - B3 SINE B2 -15 201 3 4 656 29 80 0 11 chrX 9370435 9370503 -157279793 + AT_rich Low_complexity Low_complexity 1 68 0 4 656 704 281 136 5 chrX 9370605 9370792 -157279504 + Lx9 LINE L1 6832 7165 -479 4 656 336 24 0 0 chrX 9370792 9370833 -157279463 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 656 704 259 226 10 chrX 9370833 9371045 -157279251 + Lx9 LINE L1 7166 7430 -214 4 656 1629 183 19 153 chrX 9371053 9371485 -157278811 + ORR1D1 LTR MaLR 1 374 0 4 656 653 271 3 207 chrX 9371485 9371558 -157278738 + ORR1D1-int LTR MaLR 1 56 -1736 4 656 180 0 0 0 chrX 9371558 9371578 -157278718 + (TTTAA)n Simple_repeat Simple_repeat 1 20 0 4 656 653 271 3 207 chrX 9371578 9371590 -157278706 + ORR1D1-int LTR MaLR 57 60 -1732 4 656 1145 133 5 5 chrX 9371590 9371787 -157278509 - Lx2A1 LINE L1 -11 6997 6801 4 656 5155 217 86 37 chrX 9371787 9373050 -157277246 + ORR1D1-int LTR MaLR 53 1283 -226 4 656 198 0 0 0 chrX 9373050 9373072 -157277224 + (TA)n Simple_repeat Simple_repeat 2 23 0 4 656 5155 199 85 16 chrX 9373072 9373256 -157277040 + ORR1D1-int LTR MaLR 1150 1369 -1 4 656 831 244 163 18 chrX 9373256 9373582 -157276714 + ORR1D1 LTR MaLR 1 393 -26 4 656 376 329 0 0 chrX 9373583 9373662 -157276634 - B1F SINE Alu -70 79 1 4 656 22 56 0 0 chrX 9373933 9373969 -157276327 + AT_rich Low_complexity Low_complexity 1 36 0 4 656 321 291 25 83 chrX 9374032 9374152 -157276144 - PB1D7 SINE Alu -5 115 3 4 656 577 302 40 72 chrX 9374413 9374663 -157275633 - RMER15-int LTR ERVL -248 4751 4510 4 656 291 282 118 0 chrX 9374730 9374815 -157275481 - RMER15-int LTR ERVL -594 4405 4311 4 656 778 267 80 83 chrX 9375135 9375790 -157274506 - Lx8 LINE L1 -1568 5905 5179 4 656 1493 208 30 170 chrX 9375943 9376384 -157273912 + MTE2b LTR MaLR 1 379 0 4 656 336 281 91 27 chrX 9376384 9376527 -157273769 - MIR SINE MIR -45 223 65 4 656 741 253 97 5 chrX 9377770 9377965 -157272331 - B3 SINE B2 -1 215 3 4 656 975 253 116 36 chrX 9378070 9378373 -157271923 - MTD LTR MaLR -5 414 88 4 656 288 292 180 0 chrX 9378416 9378505 -157271791 - B4A SINE B4 -161 131 27 4 656 260 275 110 0 chrX 9378560 9378669 -157271627 - Charlie1 DNA MER1_type 0 2781 2661 4 656 578 269 0 20 chrX 9378678 9378826 -157271470 + B1F2 SINE Alu 5 149 0 4 656 391 354 59 36 chrX 9378838 9379058 -157271238 - Charlie1 DNA MER1_type -2555 226 2 4 656 26 50 0 0 chrX 9379145 9379185 -157271111 + AT_rich Low_complexity Low_complexity 1 40 0 4 656 675 328 30 20 chrX 9380492 9380694 -157269602 - MER63A DNA AcHobo 0 210 7 4 656 937 257 211 9 chrX 9380696 9381037 -157269259 - MTD LTR MaLR 0 419 10 4 656 933 158 213 0 chrX 9381389 9381572 -157268724 + URR1A DNA MER1_type 1 222 -4 4 656 201 366 54 40 chrX 9381609 9381757 -157268539 - L2b LINE L2 -9 3417 3268 4 656 202 364 80 18 chrX 9382392 9382504 -157267792 - MIR SINE MIR -139 123 5 4 656 21 36 0 0 chrX 9382722 9382750 -157267546 + AT_rich Low_complexity Low_complexity 1 28 0 4 656 373 211 0 50 chrX 9382760 9382840 -157267456 - ID4 SINE ID 0 83 8 4 656 194 340 109 9 chrX 9382847 9382957 -157267339 - MIR SINE MIR -37 225 105 4 656 385 297 49 42 chrX 9382965 9383109 -157267187 + B1_Mm SINE Alu 3 147 0 4 656 228 231 128 0 chrX 9383173 9383251 -157267045 - MIR SINE MIR -170 92 5 4 656 1117 93 17 0 chrX 9383252 9383424 -157266872 + (TTTC)n Simple_repeat Simple_repeat 2 176 0 4 656 716 33 11 0 chrX 9383424 9383514 -157266782 + (TTCTC)n Simple_repeat Simple_repeat 4 95 0 4 656 2314 67 3 0 chrX 9383514 9383811 -157266485 - L1_Mus1 LINE L1 -9 6558 6261 4 656 358 266 56 42 chrX 9384004 9384220 -157266076 - L1MA10 LINE L1 -13 6321 6103 4 656 225 211 70 0 chrX 9384256 9384313 -157265983 - MLT1A0 LTR MaLR -41 324 264 4 656 740 238 87 15 chrX 9384395 9384591 -157265705 - B3 SINE B2 -6 210 1 4 656 887 285 36 13 chrX 9384822 9385124 -157265172 - Lx6 LINE L1 -16 7444 7136 4 656 990 157 173 0 chrX 9385209 9385400 -157264896 - URR1B DNA MER1_type -1 224 1 4 656 829 272 14 32 chrX 9385604 9385824 -157264472 - Lx8 LINE L1 -123 7350 7135 5 656 374 253 0 44 chrX 9386237 9386328 -157263968 + ID_B1 SINE B4 131 217 -7 5 656 345 212 36 48 chrX 9386254 9386338 -157263958 + B1F SINE Alu 67 149 0 5 656 401 264 16 98 chrX 9387020 9387142 -157263154 - PB1D7 SINE Alu -6 114 3 5 656 363 377 71 0 chrX 9387203 9387386 -157262910 - MIRb SINE MIR -46 222 27 5 656 217 237 0 0 chrX 9387467 9387526 -157262770 + A-rich Low_complexity Low_complexity 1 59 0 5 656 384 30 0 43 chrX 9388160 9388229 -157262067 - L1Md_F2 LINE L1 0 6582 6517 5 656 316 347 57 8 chrX 9388418 9388540 -157261756 + B1F SINE Alu 1 128 -21 5 656 316 340 48 28 chrX 9388548 9388693 -157261603 + B1F2 SINE Alu 1 148 -1 5 656 574 251 211 14 chrX 9388738 9388951 -157261345 - MTD LTR MaLR -14 405 164 5 656 402 57 0 0 chrX 9388997 9389050 -157261246 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 656 216 0 0 0 chrX 9389050 9389074 -157261222 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 656 415 277 243 0 chrX 9389135 9389283 -157261013 - B3 SINE B2 -28 188 5 5 656 2955 150 79 87 chrX 9389554 9390247 -157260049 - RMER6C LTR ERVK -2 688 1 5 656 249 98 0 0 chrX 9390274 9390315 -157259981 + (CAGAGA)n Simple_repeat Simple_repeat 6 46 0 5 656 311 25 0 24 chrX 9390322 9390363 -157259933 + HAL1-3A_ME LINE L1 1978 2017 -841 5 656 18166 82 8 11 chrX 9390508 9393980 -157256316 - L1Md_A LINE L1 -2194 3689 232 5 656 4627 101 16 4 chrX 9393980 9394728 -157255568 - MusHAL1 LINE L1 -454 2258 1502 5 656 1870 92 96 0 chrX 9394727 9395020 -157255276 - L1VL2 LINE L1 -5545 790 470 5 656 1530 69 20 0 chrX 9395047 9395250 -157255046 - L1_Mus2 LINE L1 0 6566 6360 5 656 262 307 31 16 chrX 9395389 9395518 -157254778 - Lx9 LINE L1 -1668 5976 5846 5 656 3261 141 49 13 chrX 9395564 9395591 -157254705 - Lx2 LINE L1 -329 6668 6644 5 656 1396 144 5 0 chrX 9395591 9395813 -157254483 - Lx2 LINE L1 0 6997 6775 5 656 3261 141 49 13 chrX 9395813 9396397 -157253899 - Lx2 LINE L1 -354 6643 6035 5 656 948 297 75 34 chrX 9396417 9396787 -157253509 - MTD LTR MaLR -20 401 1 5 656 1492 251 30 61 chrX 9396787 9397327 -157252969 - Lx9 LINE L1 -63 5784 5262 5 656 415 224 8 25 chrX 9397338 9397457 -157252839 - Lx8 LINE L1 -4 7469 7353 5 656 2365 182 58 38 chrX 9397477 9398032 -157252264 - Lx4B LINE L1 0 7058 6493 5 656 423 274 16 16 chrX 9398088 9398214 -157252082 - Lx8 LINE L1 -202 7271 7146 5 656 237 254 55 16 chrX 9398227 9398355 -157251941 - Lx8 LINE L1 0 7473 7341 5 656 2273 181 43 20 chrX 9398355 9398801 -157251495 - RLTR19 LTR ERVK -43 456 1 5 656 180 0 0 0 chrX 9399533 9399553 -157250743 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 656 195 42 0 0 chrX 9399657 9399681 -157250615 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 5 656 23722 82 7 9 chrX 9399688 9403866 -157246430 - L1_Mus1 LINE L1 -2 6565 2400 5 656 1967 278 143 24 chrX 9403886 9404806 -157245490 - Lx8 LINE L1 -331 7142 6113 5 656 1255 294 29 12 chrX 9405129 9405724 -157244572 - Lx8 LINE L1 -1669 5975 5370 5 656 2483 234 14 36 chrX 9405723 9406299 -157243997 - Lx6 LINE L1 -172 7288 6726 5 656 461 54 0 51 chrX 9406299 9406377 -157243919 + L1Md_F2 LINE L1 6509 6582 0 5 656 1167 76 0 0 chrX 9406800 9406945 -157243351 + B1_Mus2 SINE Alu 1 145 -2 5 656 284 333 73 9 chrX 9407118 9407227 -157243069 - PB1D7 SINE Alu -3 117 2 5 656 331 365 69 30 chrX 9407563 9407956 -157242340 + L1M4b LINE L1 552 959 -6375 5 656 246 252 121 0 chrX 9408038 9408115 -157242181 + BC1_Mm scRNA scRNA 1 85 -67 5 656 289 219 73 0 chrX 9408294 9408376 -157241920 + L1M4b LINE L1 1317 1404 -5930 5 656 1201 339 45 53 chrX 9408871 9409363 -157240933 + MLT2B3 LTR ERVL 27 514 -40 5 656 396 0 0 0 chrX 9409787 9409831 -157240465 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 656 480 371 6 12 chrX 9409937 9410106 -157240190 + LTR16C LTR ERVL 17 184 -305 5 656 470 355 103 38 chrX 9410241 9410715 -157239581 + MLT1D LTR MaLR 1 505 0 5 656 419 352 53 40 chrX 9410719 9410944 -157239352 + MLT1D-int LTR MaLR 3 230 -1259 5 656 600 328 152 20 chrX 9411190 9411591 -157238705 - RLTR28B LTR ERVL -11 470 17 5 656 285 305 109 3 chrX 9411645 9411763 -157238533 + PB1 SINE Alu 20 139 -8 5 656 315 259 0 36 chrX 9411778 9411853 -157238443 + ID4 SINE ID 3 76 -7 5 656 186 43 0 0 chrX 9411853 9411876 -157238420 + (GGAA)n Simple_repeat Simple_repeat 1 23 0 5 656 223 178 0 0 chrX 9412434 9412479 -157237817 + T-rich Low_complexity Low_complexity 1 45 0 5 656 321 68 0 0 chrX 9413116 9413160 -157237136 + (TAAA)n Simple_repeat Simple_repeat 4 47 0 5 656 894 316 96 45 chrX 9413236 9414111 -157236185 - L1_Rod LINE L1 -277 5570 4651 5 656 1154 210 4 18 chrX 9414136 9414364 -157235932 - URR1B DNA MER1_type 0 225 1 5 656 297 250 164 35 chrX 9415827 9415943 -157234353 - MTC LTR MaLR -14 405 275 5 656 4100 231 49 57 chrX 9415987 9417258 -157233038 - Lx9 LINE L1 -1 7643 6383 5 656 4023 192 50 37 chrX 9417369 9418594 -157231702 - Lx9 LINE L1 -1538 6106 4840 5 656 1437 222 54 65 chrX 9418587 9419159 -157231137 - Lx9 LINE L1 -1298 4549 3984 5 656 844 216 52 5 chrX 9419164 9419355 -157230941 - MTC LTR MaLR -219 202 3 5 656 567 288 59 95 chrX 9420937 9421249 -157229047 + MLT1-int LTR MaLR 232 607 -764 5 656 381 153 0 0 chrX 9421728 9421800 -157228496 + CT-rich Low_complexity Low_complexity 2 73 0 5 656 1744 261 37 4 chrX 9421802 9422263 -157228033 - Lx6 LINE L1 -26 7434 6959 5 656 1291 244 46 26 chrX 9422278 9422993 -157227303 - Lx6 LINE L1 -578 6882 5910 5 656 359 305 104 55 chrX 9423031 9423251 -157227045 + MLT1-int LTR MaLR 781 1055 -434 5 656 466 122 11 109 chrX 9425484 9425576 -157224720 + RLTR28 LTR ERVL 23 105 -419 5 656 2163 186 23 27 chrX 9425805 9426243 -157224053 - RLTR28 LTR ERVL 0 524 89 5 656 1085 232 69 38 chrX 9427876 9428227 -157222069 - RMER21B LTR ERV1 -263 684 280 5 656 25 51 0 0 chrX 9429776 9429815 -157220481 + AT_rich Low_complexity Low_complexity 1 39 0 5 656 531 231 36 58 chrX 9429825 9429963 -157220333 + B1_Mur1 SINE Alu 10 144 -5 5 656 955 271 67 38 chrX 9429978 9430323 -157219973 - Lx9 LINE L1 -369 7275 6921 5 656 329 366 22 15 chrX 9430709 9430845 -157219451 - B1F1 SINE Alu 0 149 13 5 656 23 0 0 0 chrX 9431281 9431304 -157218992 + AT_rich Low_complexity Low_complexity 1 23 0 5 656 350 116 14 0 chrX 9431472 9431541 -157218755 - L1Md_F3 LINE L1 -2 6582 6513 5 656 3354 43 2 0 chrX 9431611 9432006 -157218290 + MTA_Mm LTR MaLR 1 396 0 5 656 1040 331 61 13 chrX 9432289 9432728 -157217568 - MLT2B1 LTR ERVL -49 466 7 5 656 1799 180 51 14 chrX 9432959 9433309 -157216987 + ORR1B2 LTR MaLR 5 367 0 5 656 297 279 56 44 chrX 9433520 9433610 -157216686 - 5S rRNA rRNA -29 92 2 5 656 255 234 0 13 chrX 9433908 9433986 -157216310 - LTR37A LTR ERV1 -4 422 346 5 656 875 231 115 143 chrX 9433995 9434379 -157215917 - ORR1D1 LTR MaLR 0 374 2 5 656 264 356 20 0 chrX 9434379 9434480 -157215816 - PB1D10 SINE Alu -13 104 2 5 656 249 33 0 0 chrX 9434765 9434795 -157215501 + (TC)n Simple_repeat Simple_repeat 2 31 0 5 656 474 18 0 0 chrX 9434847 9434902 -157215394 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 656 296 257 112 12 chrX 9435242 9435411 -157214885 + L1M2 LINE L1 5292 5477 -823 5 656 777 270 82 100 chrX 9435496 9435875 -157214421 - MTE2a LTR MaLR 0 379 8 5 656 1054 320 174 61 chrX 9435880 9436257 -157214039 - MTE2a-int LTR MaLR -3 1577 1169 5 656 5317 12 5 0 chrX 9436257 9436854 -157213442 - L1Md_T LINE L1 -3 6579 5980 5 10 1054 305 111 88 chrX 9436854 9437587 -157212709 - MTE2a-int LTR MaLR -412 1168 1 5 657 709 314 80 101 chrX 9437587 9437963 -157212333 - MTE2a LTR MaLR 0 379 12 5 657 598 256 16 0 chrX 9438001 9438130 -157212166 + B1F SINE Alu 9 139 -10 5 657 222 37 0 0 chrX 9439810 9439837 -157210459 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 5 657 269 276 77 26 chrX 9439839 9439917 -157210379 - B1F1 SINE Alu -15 134 53 5 657 275 350 62 49 chrX 9441202 9441346 -157208950 + B1F1 SINE Alu 1 146 -3 5 657 1124 66 7 0 chrX 9441926 9442077 -157208219 - L1_Mus1 LINE L1 0 6567 6416 5 657 1461 81 14 5 chrX 9442077 9442288 -157208008 + L1_Mus1 LINE L1 5946 6158 -409 5 657 197 353 195 38 chrX 9442413 9442572 -157207724 - MIR SINE MIR -68 194 11 5 657 480 253 0 0 chrX 9442674 9442769 -157207527 - B1_Mur1 SINE Alu -2 147 53 5 657 376 271 104 0 chrX 9442846 9442942 -157207354 - PB1D10 SINE Alu -7 110 5 5 657 296 356 6 0 chrX 9443189 9443295 -157207001 + PB1D10 SINE Alu 10 119 -1 5 657 1221 55 0 0 chrX 9443393 9443539 -157206757 + B1_Mus1 SINE Alu 2 147 -1 5 657 269 26 26 0 chrX 9444425 9444463 -157205833 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 657 681 114 0 0 chrX 9444726 9444840 -157205456 + (TC)n Simple_repeat Simple_repeat 1 114 0 5 657 351 0 0 0 chrX 9444840 9444879 -157205417 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 657 405 0 0 0 chrX 9445921 9445966 -157204330 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 657 229 133 50 30 chrX 9446255 9446356 -157203940 + (TA)n Simple_repeat Simple_repeat 1 103 0 5 657 336 305 77 32 chrX 9446735 9446891 -157203405 + MIR SINE MIR 57 219 -43 5 657 258 224 0 0 chrX 9447366 9447433 -157202863 - L1MB7 LINE L1 -10 6174 6108 5 657 324 248 197 41 chrX 9447736 9447980 -157202316 + Cheshire DNA MER1_type 2135 2416 -4 5 657 1118 65 0 0 chrX 9448154 9448292 -157202004 + B1_Mus1 SINE Alu 1 138 -10 5 657 1215 182 116 11 chrX 9448346 9448613 -157201683 + Lx LINE L1 6356 6650 -4 5 657 17612 103 20 0 chrX 9448597 9450050 -157200246 + L1_Mus2 LINE L1 3242 4729 -1154 5 657 3231 47 8 0 chrX 9450050 9450452 -157199844 + L1Md_F2 LINE L1 6176 6580 -2 5 657 17612 91 11 2 chrX 9450452 9452270 -157198026 + L1_Mus2 LINE L1 4730 6564 -2 5 657 369 0 0 0 chrX 9452272 9452313 -157197983 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 657 287 236 0 0 chrX 9452555 9452610 -157197686 + MTD LTR MaLR 1 55 -366 5 657 945 215 64 23 chrX 9452593 9452812 -157197484 + MTD LTR MaLR 178 405 -14 5 657 207 88 0 0 chrX 9453607 9453641 -157196655 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 6 657 603 135 19 9 chrX 9453647 9453752 -157196544 - B1_Mus2 SINE Alu 0 147 42 6 657 265 215 30 30 chrX 9453703 9453770 -157196526 - 4.5SRNA scRNA scRNA -8 86 20 6 657 595 282 128 2 chrX 9454403 9454594 -157195702 - B3A SINE B2 -1 215 1 6 657 1070 101 0 0 chrX 9455414 9455562 -157194734 - B1_Mus1 SINE Alu 0 148 1 6 657 508 261 0 48 chrX 9455566 9455691 -157194605 - ID_B1 SINE B4 -1 223 105 6 657 391 316 49 49 chrX 9455571 9455714 -157194582 - B1F1 SINE Alu -6 143 1 6 657 381 278 85 23 chrX 9455809 9455938 -157194358 - B1F1 SINE Alu -7 142 6 6 657 282 314 38 0 chrX 9456754 9456859 -157193437 - Charlie15a DNA MER1_type -38 186 78 6 657 696 164 118 15 chrX 9457673 9457809 -157192487 - B1_Mur4 SINE Alu 0 150 1 6 657 216 0 0 0 chrX 9458886 9458910 -157191386 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 657 30 0 0 0 chrX 9459506 9459536 -157190760 + AT_rich Low_complexity Low_complexity 1 30 0 6 657 407 258 221 42 chrX 9459571 9459761 -157190535 + Lx7 LINE L1 7023 7246 -450 6 657 219 132 0 26 chrX 9459937 9459976 -157190320 + B3A SINE B2 6 43 -155 6 657 1462 117 4 71 chrX 9459976 9460244 -157190052 - L1_Mur2 LINE L1 -1359 4518 4269 6 657 526 256 90 0 chrX 9460834 9460967 -157189329 - RSINE1 SINE B4 -18 147 3 6 657 854 149 29 0 chrX 9461365 9461540 -157188756 + CT-rich Low_complexity Low_complexity 1 180 0 6 657 620 140 11 0 chrX 9461540 9461633 -157188663 + polypyrimidine Low_complexity Low_complexity 3 96 0 6 657 311 335 16 57 chrX 9463667 9463860 -157186436 - Lx8 LINE L1 -253 7220 7036 6 657 271 235 48 25 chrX 9464623 9464743 -157185553 + B3 SINE B2 5 126 -72 6 657 25 0 0 0 chrX 9464895 9464920 -157185376 + AT_rich Low_complexity Low_complexity 1 25 0 6 657 240 133 33 16 chrX 9464940 9465001 -157185295 + (TA)n Simple_repeat Simple_repeat 2 63 0 6 657 21 0 0 0 chrX 9465613 9465634 -157184662 + AT_rich Low_complexity Low_complexity 1 21 0 6 657 252 239 8 161 chrX 9466722 9466852 -157183444 - LTR16E2 LTR ERVL 0 568 459 6 657 40812 13 0 6 chrX 9466918 9473328 -157176968 - L1Md_A LINE L1 0 6582 215 6 657 180 0 0 0 chrX 9473363 9473383 -157176913 + (CA)n Simple_repeat Simple_repeat 2 21 0 6 657 1518 222 75 19 chrX 9473401 9473772 -157176524 - MTD LTR MaLR -20 399 8 6 657 369 0 0 0 chrX 9474595 9474636 -157175660 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 657 344 266 25 0 chrX 9474669 9474748 -157175548 - ID4_ SINE ID -2 81 1 6 657 1540 195 128 5 chrX 9474769 9474958 -157175338 - Lx9 LINE L1 -3 7641 7436 6 657 386 39 19 0 chrX 9474958 9475010 -157175286 + (TA)n Simple_repeat Simple_repeat 2 54 0 6 657 1540 195 128 5 chrX 9475010 9475212 -157175084 - Lx9 LINE L1 -209 7435 7202 6 657 1248 282 52 36 chrX 9475442 9475887 -157174409 - Lx6 LINE L1 -8 7452 7001 6 657 1205 108 28 11 chrX 9476231 9476409 -157173887 - B2_Mm2 SINE B2 0 195 15 6 657 590 282 0 52 chrX 9476559 9476731 -157173565 - RSINE1 SINE B4 0 165 3 6 657 654 347 62 47 chrX 9477335 9477740 -157172556 - MLT1D LTR MaLR -14 491 81 6 657 361 270 0 0 chrX 9477781 9477881 -157172415 - Lx7 LINE L1 -19 7677 7578 6 657 1695 243 61 0 chrX 9478059 9478442 -157171854 - MTD LTR MaLR -16 403 10 6 657 269 316 81 10 chrX 9479064 9479163 -157171133 + MLT1L LTR MaLR 422 527 -83 6 657 221 0 0 33 chrX 9479174 9479204 -157171092 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 657 909 233 78 0 chrX 9479557 9479750 -157170546 + B3 SINE B2 7 214 -2 6 657 271 268 10 49 chrX 9479750 9479852 -157170444 + MLT1A1 LTR MaLR 30 127 -281 6 657 259 333 27 0 chrX 9480022 9480097 -157170199 - ID4 SINE ID -5 78 2 6 657 304 293 145 8 chrX 9480107 9480224 -157170072 - ID_B1 SINE B4 -1 223 91 6 657 303 198 60 36 chrX 9480228 9480312 -157169984 + MLT1A1 LTR MaLR 307 392 -16 6 657 202 379 71 47 chrX 9481247 9481416 -157168880 + MER5B DNA MER1_type 1 173 -5 6 657 695 130 7 0 chrX 9482264 9482410 -157167886 + (TC)n Simple_repeat Simple_repeat 2 148 0 6 657 534 16 0 0 chrX 9482410 9482473 -157167823 + (CA)n Simple_repeat Simple_repeat 1 63 0 6 657 537 231 86 0 chrX 9482489 9482606 -157167690 - RSINE1 SINE B4 -36 129 3 6 657 267 173 24 12 chrX 9482982 9483064 -157167232 + (TG)n Simple_repeat Simple_repeat 1 83 0 6 657 319 204 39 14 chrX 9483098 9483308 -157166988 + (TG)n Simple_repeat Simple_repeat 1 215 0 6 657 853 184 79 12 chrX 9483815 9483875 -157166421 - Lx6 LINE L1 -992 6468 6396 6 657 513 0 0 0 chrX 9483875 9483932 -157166364 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 657 853 184 79 12 chrX 9483932 9484036 -157166260 - Lx6 LINE L1 -1065 6395 6294 6 657 691 139 132 0 chrX 9484080 9484209 -157166087 + URR1A DNA MER1_type 81 226 0 6 657 9119 164 30 19 chrX 9484250 9485975 -157164321 - Lx6 LINE L1 -116 5764 4022 6 657 222 91 0 0 chrX 9487127 9487160 -157163136 + (T)n Simple_repeat Simple_repeat 1 33 0 6 657 274 281 81 30 chrX 9487202 9487301 -157162995 + L2a LINE L2 3323 3426 0 6 657 417 317 142 10 chrX 9487925 9488129 -157162167 + MIRb SINE MIR 20 250 -18 6 657 407 106 0 15 chrX 9488419 9488486 -157161810 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 657 232 366 67 7 chrX 9488544 9488679 -157161617 - MLT1E2 LTR MaLR -374 253 111 6 657 1197 244 156 8 chrX 9490299 9490659 -157159637 - MTD LTR MaLR -6 413 1 6 657 368 339 20 32 chrX 9491617 9491792 -157158504 + MER20B DNA MER1_type 37 212 -7 6 657 393 287 51 14 chrX 9492148 9492286 -157158010 + B1F1 SINE Alu 7 149 0 6 657 2356 157 126 2 chrX 9492875 9493328 -157156968 - Lx2B LINE L1 -5 6995 6487 6 657 684 115 0 0 chrX 9493334 9493430 -157156866 + L1_Mm LINE L1 5419 5514 -369 6 657 12250 155 14 83 chrX 9493429 9494162 -157156134 - L1_Mur2 LINE L1 -477 5400 4658 6 657 224 30 0 29 chrX 9494162 9494196 -157156100 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 6 657 12250 155 14 83 chrX 9494196 9495307 -157154989 - L1_Mur2 LINE L1 -1220 4657 3544 6 657 990 89 6 88 chrX 9495307 9495467 -157154829 + B1_Mus2 SINE Alu 1 147 0 6 657 12250 155 14 83 chrX 9495467 9496270 -157154026 - L1_Mur2 LINE L1 -2334 3543 2936 6 657 25963 23 0 0 chrX 9496257 9500000 -157150296 - L1Md_T LINE L1 0 6582 2840 6 657 11475 80 1 7 chrX 9500004 9503128 -157147168 - L1Md_Gf LINE L1 -3047 2839 1 1 657 9680 133 20 6 chrX 9503127 9505261 -157145035 - L1VL4 LINE L1 -948 2611 447 2 657 263 306 52 26 chrX 9505457 9505648 -157144648 - L1VL4 LINE L1 -5779 523 328 2 657 1139 231 28 16 chrX 9506285 9506640 -157143656 - BGLII_B LTR ERVK -1 440 78 3 657 354 263 30 55 chrX 9507915 9508080 -157142216 - Lx8 LINE L1 -6 7467 7307 4 657 237 374 0 9 chrX 9508320 9508428 -157141868 + (CA)n Simple_repeat Simple_repeat 2 108 0 5 657 342 67 0 0 chrX 9508429 9508474 -157141822 + (GA)n Simple_repeat Simple_repeat 1 45 0 6 657 443 279 143 0 chrX 9509113 9509253 -157141043 - B3 SINE B2 -56 160 1 7 657 483 18 0 0 chrX 9509377 9509433 -157140863 + (TC)n Simple_repeat Simple_repeat 2 57 0 8 657 738 278 62 4 chrX 9509547 9509821 -157140475 - Lx8 LINE L1 -600 7096 6795 4 657 457 356 0 0 chrX 9511141 9511290 -157139006 + B1F1 SINE Alu 1 149 0 9 657 378 0 0 0 chrX 9511291 9511333 -157138963 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 657 684 237 191 0 chrX 9511796 9512011 -157138285 - RMER1C Other Other -46 1296 1041 1 657 272 378 132 20 chrX 9512710 9512766 -157137530 - LTR16A1 LTR ERVL -20 436 381 1 657 1116 193 0 46 chrX 9512766 9512983 -157137313 - B3 SINE B2 -9 207 1 1 657 272 378 132 20 chrX 9512983 9513172 -157137124 - LTR16A1 LTR ERVL -76 380 163 1 657 343 217 156 19 chrX 9513172 9513332 -157136964 + MER53 DNA hAT 2 183 -10 1 657 393 75 0 0 chrX 9513655 9513708 -157136588 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 657 1459 49 0 47 chrX 9514011 9514204 -157136092 - B2_Mm2 SINE B2 -9 186 3 1 657 660 308 70 19 chrX 9514541 9514756 -157135540 + B4 SINE B4 49 274 -18 1 657 405 0 0 0 chrX 9514805 9514850 -157135446 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 657 1553 218 9 20 chrX 9514850 9515210 -157135086 - Lx6 LINE L1 -581 6879 6450 1 657 181 317 32 48 chrX 9515400 9515463 -157134833 + L2 LINE L2 74 135 -3284 2 657 694 271 75 24 chrX 9515573 9515826 -157134470 - MER58B DNA MER1_type -17 324 59 2 657 210 352 17 61 chrX 9516052 9516167 -157134129 - MER5B DNA MER1_type -2 176 67 2 657 1137 70 19 0 chrX 9516747 9516905 -157133391 - L1_Mus1 LINE L1 -2 6565 6405 2 657 1739 28 0 9 chrX 9516905 9517115 -157133181 + L1_Mus1 LINE L1 6152 6361 -206 2 657 345 295 61 18 chrX 9518583 9518697 -157131599 - PB1D7 SINE Alu -1 119 1 2 657 392 305 8 8 chrX 9518965 9519084 -157131212 + PB1D9 SINE Alu 2 120 0 2 657 402 259 33 26 chrX 9519294 9519445 -157130851 - Lx6 LINE L1 -8 7452 7301 2 657 360 358 102 42 chrX 9521464 9521895 -157128401 - L2 LINE L2 -367 3052 2596 2 657 503 230 6 0 chrX 9522591 9522756 -157127540 + (TG)n Simple_repeat Simple_repeat 2 167 0 2 657 954 151 15 0 chrX 9522818 9523150 -157127146 + (TG)n Simple_repeat Simple_repeat 1 337 0 2 657 598 172 0 53 chrX 9523187 9523377 -157126919 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 657 1127 133 99 38 chrX 9523519 9523730 -157126566 - URR1B DNA MER1_type 0 225 2 2 657 939 139 0 0 chrX 9524516 9524696 -157125600 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 657 1282 161 4 4 chrX 9524962 9525187 -157125109 + URR1B DNA MER1_type 1 225 0 3 657 225 286 0 0 chrX 9525318 9525381 -157124915 + A-rich Low_complexity Low_complexity 1 63 0 3 657 186 103 0 0 chrX 9525900 9525929 -157124367 + (T)n Simple_repeat Simple_repeat 1 29 0 3 657 805 211 158 17 chrX 9526512 9526788 -157123508 - MTD LTR MaLR -14 405 61 3 657 356 157 12 24 chrX 9526799 9526884 -157123412 + Lx9 LINE L1 7551 7634 -10 3 657 952 80 70 35 chrX 9526955 9527097 -157123199 - B1_Mus1 SINE Alu 0 148 2 3 657 528 16 0 0 chrX 9528498 9528559 -157121737 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 657 384 22 0 0 chrX 9528559 9528603 -157121693 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 657 233 234 57 21 chrX 9529021 9529161 -157121135 + (TATAA)n Simple_repeat Simple_repeat 5 149 0 3 657 784 173 42 28 chrX 9529310 9529453 -157120843 + B1_Mur4 SINE Alu 6 150 0 4 657 22 56 0 0 chrX 9529591 9529627 -157120669 + AT_rich Low_complexity Low_complexity 1 36 0 4 657 799 204 189 0 chrX 9529864 9530070 -157120226 - MTD LTR MaLR -174 245 1 4 657 7326 154 45 4 chrX 9530166 9531720 -157118576 - Lx4B LINE L1 -20 7038 5406 4 657 356 305 89 38 chrX 9531729 9532179 -157118117 + L1M4 LINE L1 4203 4675 -1471 4 657 348 329 90 20 chrX 9532479 9532724 -157117572 + L1MEg LINE L1 1140 1401 -4683 4 657 210 321 0 0 chrX 9533206 9533259 -157117037 - MIRb SINE MIR -194 74 22 4 657 255 61 0 0 chrX 9534128 9534161 -157116135 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 4 657 578 288 184 32 chrX 9534979 9535262 -157115034 - MER119 DNA MER1_type -9 574 249 4 657 423 0 0 0 chrX 9535372 9535419 -157114877 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 657 542 103 11 0 chrX 9535439 9535526 -157114770 + (TA)n Simple_repeat Simple_repeat 1 88 0 5 657 263 392 112 63 chrX 9535526 9535749 -157114547 - MER119 DNA MER1_type -341 242 9 4 657 225 182 0 0 chrX 9536081 9536136 -157114160 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 5 657 2371 8 0 0 chrX 9537479 9537744 -157112552 + L1Md_A LINE L1 6318 6582 0 5 657 258 95 0 0 chrX 9537940 9537982 -157112314 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 657 327 307 19 26 chrX 9537993 9538147 -157112149 - Lx7 LINE L1 -401 7295 7143 5 657 415 260 0 20 chrX 9539018 9539116 -157111180 + B1F SINE Alu 35 130 -19 5 657 498 33 0 0 chrX 9539200 9539260 -157111036 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 657 37 62 0 0 chrX 9540481 9540546 -157109750 + AT_rich Low_complexity Low_complexity 1 65 0 5 657 21 36 0 0 chrX 9540967 9540995 -157109301 + AT_rich Low_complexity Low_complexity 1 28 0 5 657 1126 89 0 12 chrX 9541499 9541670 -157108626 + (GAAA)n Simple_repeat Simple_repeat 3 171 0 5 657 187 298 105 0 chrX 9541726 9541783 -157108513 + MIRc SINE MIR 85 147 -121 6 657 235 256 163 22 chrX 9542408 9542500 -157107796 - MIRb SINE MIR -63 199 95 6 657 21 0 0 0 chrX 9542586 9542607 -157107689 + AT_rich Low_complexity Low_complexity 1 21 0 6 657 453 36 0 0 chrX 9542870 9542925 -157107371 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 6 657 33785 48 1 4 chrX 9543070 9548542 -157101754 + L1Md_T LINE L1 38 5589 -297 6 657 8313 35 0 12 chrX 9548542 9549550 -157100746 + L1Md_T LINE L1 5590 6585 0 6 657 234 0 0 0 chrX 9549953 9549979 -157100317 + (CTG)n Simple_repeat Simple_repeat 1 26 0 6 657 987 76 0 0 chrX 9551710 9551842 -157098454 + B1_Mus1 SINE Alu 5 136 -12 6 657 930 35 0 0 chrX 9551842 9551956 -157098340 + (GAA)n Simple_repeat Simple_repeat 1 114 0 6 657 1907 169 140 40 chrX 9553311 9554192 -157096104 - L1_Mur1 LINE L1 -4361 1525 208 6 657 3160 123 5 12 chrX 9554249 9554905 -157095391 + L1VL4 LINE L1 410 1059 -2500 6 657 17657 163 18 11 chrX 9554899 9558894 -157091402 + Lx2 LINE L1 2029 6019 -978 7 657 1278 149 63 6 chrX 9558899 9559141 -157091155 - RLTR13D6 LTR ERVK -858 256 1 7 657 189 0 0 0 chrX 9559778 9559799 -157090497 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 7 657 1193 48 7 0 chrX 9563396 9563542 -157086754 + B1_Mus1 SINE Alu 2 148 0 7 657 225 189 132 0 chrX 9563734 9563787 -157086509 + MTC LTR MaLR 2 61 -360 7 657 253 217 0 62 chrX 9564564 9564628 -157085668 - Lx9 LINE L1 -315 7329 7270 7 657 856 155 114 0 chrX 9564637 9564830 -157085466 + Lx9 LINE L1 7405 7619 -25 7 657 28 29 0 0 chrX 9565210 9565245 -157085051 + AT_rich Low_complexity Low_complexity 1 35 0 7 657 54 49 0 0 chrX 9565362 9565444 -157084852 + AT_rich Low_complexity Low_complexity 1 82 0 7 657 190 106 43 0 chrX 9565515 9565562 -157084734 + (TA)n Simple_repeat Simple_repeat 1 49 0 7 657 467 96 0 12 chrX 9566317 9566401 -157083895 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 8 657 195 379 0 21 chrX 9566567 9566664 -157083632 - L2c LINE L2 -1 3386 3292 8 657 639 0 0 0 chrX 9567070 9567141 -157083155 + (GA)n Simple_repeat Simple_repeat 2 72 0 8 657 743 224 65 7 chrX 9567416 9567569 -157082727 + B3 SINE B2 41 202 -14 8 657 2049 153 18 6 chrX 9567570 9567912 -157082384 - ORR1A1 LTR MaLR 0 346 1 8 657 262 88 0 66 chrX 9567918 9567979 -157082317 + (TAAA)n Simple_repeat Simple_repeat 2 58 0 8 82 403 310 23 15 chrX 9568158 9568289 -157082007 + RSINE1 SINE B4 34 165 0 8 658 38 39 0 0 chrX 9568294 9568346 -157081950 + AT_rich Low_complexity Low_complexity 1 52 0 8 658 1124 196 19 0 chrX 9568436 9568645 -157081651 - Lx4A LINE L1 -1 7057 6845 8 658 2127 106 13 0 chrX 9568647 9568948 -157081348 + Lx4A LINE L1 6529 6833 -225 8 658 231 330 39 39 chrX 9569039 9569143 -157081153 - MLT1J LTR MaLR -304 208 105 8 658 289 419 7 20 chrX 9569311 9569462 -157080834 - LTR16C LTR ERVL -47 442 294 9 658 22 35 0 0 chrX 9569849 9569878 -157080418 + AT_rich Low_complexity Low_complexity 1 29 0 9 658 867 255 52 40 chrX 9570659 9570908 -157079388 - MTD LTR MaLR 0 419 168 9 658 492 18 0 0 chrX 9572349 9572406 -157077890 + (CA)n Simple_repeat Simple_repeat 2 58 0 9 658 255 238 84 36 chrX 9572738 9572821 -157077475 - MLT1G1 LTR MaLR -22 557 471 9 658 265 300 39 2 chrX 9573209 9573295 -157077001 - MIR SINE MIR -141 127 41 9 658 329 361 25 31 chrX 9575056 9575216 -157075080 - RSINE1 SINE B4 -2 163 5 9 658 329 247 79 0 chrX 9575292 9575381 -157074915 - L1ME2z LINE L1 -25 6419 6324 9 658 204 340 98 59 chrX 9575496 9575847 -157074449 + L2a LINE L2 3030 3425 -1 9 658 294 303 81 16 chrX 9576018 9576142 -157074154 - L2 LINE L2 -527 2892 2761 9 658 21 36 0 0 chrX 9576582 9576610 -157073686 + AT_rich Low_complexity Low_complexity 1 28 0 1 658 321 26 0 0 chrX 9576614 9576652 -157073644 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 658 2343 171 132 67 chrX 9577422 9577893 -157072403 - RMER6C LTR ERVK 0 756 304 1 658 540 0 0 0 chrX 9577893 9577953 -157072343 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 658 2343 155 162 70 chrX 9577953 9578203 -157072093 - RMER6C LTR ERVK -360 330 1 1 658 345 258 21 0 chrX 9578425 9578522 -157071774 - ORR1E LTR MaLR -253 106 8 1 658 256 358 38 44 chrX 9578691 9578849 -157071447 + RSINE1 SINE B4 3 159 -6 1 658 231 302 118 43 chrX 9579061 9579272 -157071024 + MLT1A1 LTR MaLR 1 227 -181 1 658 439 264 99 3 chrX 9580911 9581039 -157069257 + PB1 SINE Alu 1 141 -8 1 658 239 302 0 0 chrX 9581039 9581102 -157069194 + ID4 SINE ID 3 65 -18 1 658 180 319 13 65 chrX 9581349 9581426 -157068870 + L2 LINE L2 1527 1599 -1820 1 658 516 273 53 11 chrX 9581474 9581663 -157068633 - L1MC2 LINE L1 -13 6331 6135 1 658 254 204 9 3 chrX 9581706 9581775 -157068521 - L1MC2 LINE L1 -1892 5893 5823 1 658 365 278 124 35 chrX 9582594 9582795 -157067501 + MERVL-int LTR ERVL 4472 4690 -795 1 658 441 0 0 0 chrX 9582795 9582844 -157067452 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 658 639 272 43 32 chrX 9583107 9583293 -157067003 - MER58A DNA MER1_type 0 224 37 1 658 452 323 123 10 chrX 9583458 9583661 -157066635 + LTR33 LTR ERVL 286 511 -4 1 658 240 250 18 0 chrX 9583688 9583744 -157066552 - Kanga1d DNA Tc2 -550 59 3 1 658 315 49 0 0 chrX 9584140 9584181 -157066115 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 658 25 51 0 0 chrX 9584293 9584332 -157065964 + AT_rich Low_complexity Low_complexity 1 39 0 1 658 7868 75 3 1 chrX 9585736 9587304 -157062992 - L1_Mus1 LINE L1 -16 6551 4982 1 658 288 297 0 0 chrX 9588753 9588817 -157061479 + (CCG)n Simple_repeat Simple_repeat 3 66 0 1 658 369 0 0 0 chrX 9590055 9590096 -157060200 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1 658 323 27 0 0 chrX 9590454 9590491 -157059805 + L1Md_T LINE L1 6356 6392 -190 1 658 207 0 0 0 chrX 9591409 9591432 -157058864 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 658 8305 40 3 1 chrX 9591450 9592738 -157057558 - L1Md_F2 LINE L1 -4 6578 5288 1 658 34864 68 2 1 chrX 9592735 9598979 -157051317 - L1Md_F2 LINE L1 -12 6570 320 1 658 1381 98 0 5 chrX 9599438 9599632 -157050664 + B2_Mm2 SINE B2 1 193 -2 1 658 327 104 0 0 chrX 9599632 9599680 -157050616 + (GAAA)n Simple_repeat Simple_repeat 1 48 0 1 658 277 359 56 19 chrX 9601494 9601656 -157048640 + Charlie10b DNA MER1_type 9 176 -66 1 658 466 348 0 14 chrX 9601719 9601862 -157048434 - RSINE1 SINE B4 -20 145 5 1 658 402 289 25 8 chrX 9602067 9602189 -157048107 + B1F SINE Alu 18 141 -8 1 658 192 77 0 0 chrX 9602436 9602462 -157047834 + (A)n Simple_repeat Simple_repeat 1 26 0 1 658 4626 48 44 0 chrX 9602569 9603155 -157047141 + L1Md_F2 LINE L1 5971 6582 0 1 658 455 287 104 0 chrX 9603178 9603293 -157047003 + ID_B1 SINE B4 1 127 -97 1 658 573 295 84 84 chrX 9605227 9605512 -157044784 - MTE2a LTR MaLR 0 379 95 1 658 459 0 0 0 chrX 9605523 9605574 -157044722 + (TTATA)n Simple_repeat Simple_repeat 5 55 0 1 658 1127 256 159 20 chrX 9605607 9605965 -157044331 + MTD LTR MaLR 12 419 0 1 658 387 225 0 219 chrX 9605967 9606081 -157044215 - MTE2a LTR MaLR -295 124 4 1 658 572 298 71 59 chrX 9606356 9607045 -157043251 - L1M3 LINE L1 -384 5799 5088 1 658 338 204 96 11 chrX 9608586 9608680 -157041616 - MTE2a LTR MaLR -1 378 277 1 658 5149 182 43 31 chrX 9608696 9609727 -157040569 + Lx4B LINE L1 6008 7050 -8 1 658 1800 19 19 0 chrX 9609735 9609945 -157040351 - L1_Mus2 LINE L1 -250 6316 6103 1 658 2386 165 30 29 chrX 9609947 9610626 -157039670 - RLTR26 LTR ERVK -8 634 1 1 658 4239 48 8 2 chrX 9610626 9611317 -157038979 - L1_Mus2 LINE L1 -458 6108 5414 1 658 394 219 83 0 chrX 9611874 9611970 -157038326 + Lx6 LINE L1 6725 6828 -632 1 658 1198 313 13 29 chrX 9611966 9612434 -157037862 + Lx6 LINE L1 6556 7373 -87 1 658 380 174 0 0 chrX 9612492 9612561 -157037735 + ORR1C1 LTR MaLR 26 94 -284 1 658 940 312 88 6 chrX 9612672 9613014 -157037282 + MLT1F LTR MaLR 168 537 -11 1 658 591 62 0 0 chrX 9613764 9613844 -157036452 + (TC)n Simple_repeat Simple_repeat 1 80 0 1 658 197 163 20 0 chrX 9613845 9613894 -157036402 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 658 309 26 0 0 chrX 9613925 9613963 -157036333 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 658 228 319 30 50 chrX 9614025 9614124 -157036172 - B2_Mm1t SINE B2 -89 104 8 1 658 315 284 10 102 chrX 9614036 9614134 -157036162 - B4A SINE B4 -202 90 2 1 658 2484 56 0 3 chrX 9614699 9615019 -157035277 + L1Md_F2 LINE L1 6264 6582 0 1 658 241 257 26 26 chrX 9615193 9615269 -157035027 + MER76 LTR ERVL 121 196 -495 1 658 580 280 179 13 chrX 9615292 9615527 -157034769 - MER2 DNA MER2_type -25 320 47 1 658 284 266 0 0 chrX 9615514 9615578 -157034718 + MER76 LTR ERVL 628 691 0 1 658 664 278 42 32 chrX 9616588 9616804 -157033492 + MER20 DNA MER1_type 1 218 -1 1 658 222 37 0 0 chrX 9617239 9617266 -157033030 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 1 658 667 168 33 47 chrX 9617276 9617426 -157032870 + B1_Mus1 SINE Alu 1 148 0 1 658 1932 38 0 0 chrX 9617501 9617740 -157032556 + L1Md_F2 LINE L1 5348 5586 -297 1 658 8562 29 0 0 chrX 9617741 9618736 -157031560 + L1Md_F2 LINE L1 5588 6582 0 1 658 360 0 0 0 chrX 9618877 9618917 -157031379 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 658 349 318 46 8 chrX 9620021 9620151 -157030145 + MER5A DNA MER1_type 53 187 -2 1 658 784 291 39 18 chrX 9620468 9620748 -157029548 - B4A SINE B4 -6 286 1 1 658 873 29 0 0 chrX 9620788 9620892 -157029404 + (TCTCCC)n Simple_repeat Simple_repeat 4 107 0 1 658 234 116 0 0 chrX 9620909 9620952 -157029344 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 1 658 995 255 104 4 chrX 9620952 9621192 -157029104 + MTD LTR MaLR 27 290 -129 1 658 240 203 45 45 chrX 9621168 9621235 -157029061 - MTD LTR MaLR -348 71 5 1 658 396 326 29 14 chrX 9621295 9621435 -157028861 + MLT1J1 LTR MaLR 19 160 -284 1 658 259 369 77 41 chrX 9621456 9621651 -157028645 + ORR1E LTR MaLR 4 205 -154 1 658 584 172 28 11 chrX 9622325 9622501 -157027795 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 658 607 178 22 18 chrX 9622538 9622812 -157027484 + (CA)n Simple_repeat Simple_repeat 1 274 0 1 658 707 185 7 26 chrX 9622833 9623138 -157027158 + (CA)n Simple_repeat Simple_repeat 1 298 0 1 658 750 180 24 5 chrX 9623153 9623588 -157026708 + (CA)n Simple_repeat Simple_repeat 1 443 0 1 658 241 226 0 0 chrX 9623630 9623683 -157026613 + GA-rich Low_complexity Low_complexity 4 56 0 1 658 2087 62 7 32 chrX 9623839 9624123 -157026173 + L1Md_F2 LINE L1 6294 6570 -12 1 658 674 332 42 14 chrX 9624138 9624273 -157026023 + Lx8 LINE L1 6395 6534 -939 1 658 360 0 0 0 chrX 9624273 9624313 -157025983 + (TAA)n Simple_repeat Simple_repeat 1 40 0 1 658 674 332 42 14 chrX 9624313 9624461 -157025835 + Lx8 LINE L1 6535 6686 -787 1 658 398 208 19 176 chrX 9625103 9625313 -157024983 + Lx4B LINE L1 6878 7054 -4 1 658 318 408 14 32 chrX 9625410 9625628 -157024668 - MER58A DNA MER1_type -2 222 9 1 658 648 145 167 16 chrX 9625776 9625902 -157024394 + MTC LTR MaLR 1 145 -276 1 658 342 198 91 23 chrX 9625882 9625970 -157024326 + MTC LTR MaLR 328 421 0 1 658 380 18 86 17 chrX 9627012 9627070 -157023226 + L1VL2 LINE L1 165 226 -6109 1 658 5735 77 72 2 chrX 9627070 9628686 -157021610 + L1VL2 LINE L1 9 1757 -1858 1 658 2673 53 64 3 chrX 9628686 9629044 -157021252 + L1_Mus1 LINE L1 6188 6567 0 1 658 5673 60 25 5 chrX 9629044 9629058 -157021238 + L1VL2 LINE L1 1758 1769 -1846 1 658 2433 104 26 21 chrX 9629133 9629516 -157020780 - L1_Mus3 LINE L1 -4 6634 6250 1 658 2770 80 5 26 chrX 9629516 9629939 -157020357 + L1_Mus3 LINE L1 5834 6247 -391 1 658 23 33 0 0 chrX 9630430 9630460 -157019836 + AT_rich Low_complexity Low_complexity 1 30 0 1 658 302 243 0 3 chrX 9630499 9630588 -157019708 - MLT1E2 LTR MaLR -3 624 555 1 658 776 192 80 7 chrX 9630969 9631166 -157019130 - MER33 DNA MER1_type -117 207 7 1 658 270 0 0 0 chrX 9633390 9633420 -157016876 + (A)n Simple_repeat Simple_repeat 1 30 0 1 658 374 290 31 31 chrX 9633502 9633630 -157016666 - MIRb SINE MIR -52 216 89 1 658 279 0 0 0 chrX 9634495 9634526 -157015770 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 658 1072 43 50 0 chrX 9635282 9635421 -157014875 + B1_Mus2 SINE Alu 2 147 0 1 658 253 275 0 14 chrX 9635594 9635664 -157014632 + CT-rich Low_complexity Low_complexity 1 69 0 1 658 241 267 328 0 chrX 9635665 9635796 -157014500 - L2a LINE L2 -10 3416 3243 1 658 313 181 24 12 chrX 9635961 9636045 -157014251 + GA-rich Low_complexity Low_complexity 5 89 0 1 658 229 300 66 11 chrX 9637362 9637453 -157012843 - Kanga1b DNA Tc2 -680 99 4 1 658 372 22 0 0 chrX 9638203 9638248 -157012048 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 658 309 135 0 0 chrX 9638261 9638313 -157011983 + (ATG)n Simple_repeat Simple_repeat 3 54 0 1 658 235 314 78 20 chrX 9639141 9639316 -157010980 + MLT1F LTR MaLR 410 583 -8 1 658 636 346 46 84 chrX 9641810 9642204 -157008092 + MTEa LTR MaLR 1 379 0 1 658 662 278 15 70 chrX 9642264 9642465 -157007831 - B3A SINE B2 -1 197 8 1 658 242 29 0 28 chrX 9642548 9642584 -157007712 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 1 658 197 359 33 53 chrX 9643548 9643698 -157006598 - MER5A DNA MER1_type -4 185 39 1 658 483 271 56 86 chrX 9643867 9644065 -157006231 + MER20 DNA MER1_type 2 193 -26 1 658 383 323 63 0 chrX 9644172 9644330 -157005966 - MER5A DNA MER1_type -2 187 20 1 658 198 103 0 0 chrX 9645286 9645315 -157004981 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 1 658 512 203 56 24 chrX 9645408 9645534 -157004762 + B1F1 SINE Alu 10 139 -10 1 658 184 369 0 15 chrX 9646969 9647035 -157003261 + L2a LINE L2 3350 3414 -12 2 658 1046 211 218 34 chrX 9647378 9647732 -157002564 + MTD LTR MaLR 1 419 0 2 658 23 0 0 0 chrX 9650745 9650768 -156999528 + AT_rich Low_complexity Low_complexity 1 23 0 2 658 183 100 0 91 chrX 9652354 9652409 -156997887 + T-rich Low_complexity Low_complexity 1 50 0 2 658 3055 82 7 0 chrX 9653638 9654041 -156996255 + L1_Mus2 LINE L1 6161 6566 0 2 658 250 257 38 63 chrX 9654310 9654389 -156995907 + MTEa LTR MaLR 290 366 -13 2 658 7466 60 6 8 chrX 9654789 9656119 -156994177 - L1Md_F2 LINE L1 -1 6581 5260 2 658 232 347 10 48 chrX 9656235 9656338 -156993958 - ID_B1 SINE B4 -30 194 96 2 658 553 304 93 79 chrX 9656439 9656871 -156993425 + MLT1L LTR MaLR 173 610 0 2 658 369 296 37 0 chrX 9658281 9658389 -156991907 + PB1D7 SINE Alu 2 113 -7 2 658 207 189 0 0 chrX 9658399 9658436 -156991860 + A-rich Low_complexity Low_complexity 2 38 0 2 658 1432 310 72 7 chrX 9658608 9659050 -156991246 + Tigger7 DNA MER2_type 24 494 -1997 2 658 220 200 0 0 chrX 9659101 9659156 -156991140 + (TAA)n Simple_repeat Simple_repeat 1 55 0 2 658 580 260 48 76 chrX 9659160 9659393 -156990903 + Tigger7 DNA MER2_type 2159 2383 -108 2 658 234 0 0 0 chrX 9659393 9659419 -156990877 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 658 580 260 48 76 chrX 9659419 9659476 -156990820 + Tigger7 DNA MER2_type 2384 2441 -50 2 658 548 237 109 4 chrX 9659509 9659679 -156990617 + MLT1L-int LTR MaLR 475 655 -834 2 658 210 182 18 0 chrX 9660846 9660901 -156989395 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 2 658 1892 151 78 3 chrX 9661957 9662277 -156988019 + Lx5 LINE L1 6707 7050 0 2 658 474 159 0 0 chrX 9662777 9662865 -156987431 + (TG)n Simple_repeat Simple_repeat 1 88 0 2 658 882 276 10 25 chrX 9662865 9663069 -156987227 - B3 SINE B2 -13 203 3 2 658 292 283 65 11 chrX 9663137 9663230 -156987066 - B1F SINE Alu -6 143 46 2 658 423 0 0 0 chrX 9663534 9663581 -156986715 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 658 297 0 0 0 chrX 9663581 9663613 -156986683 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 658 321 140 0 0 chrX 9664566 9664623 -156985673 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 658 2915 57 10 10 chrX 9664695 9665086 -156985210 - MTA_Mm LTR MaLR 0 396 6 2 658 540 246 28 48 chrX 9665296 9665441 -156984855 - B1_Mur2 SINE Alu -5 144 3 2 658 227 306 73 24 chrX 9665598 9665722 -156984574 + MER104 DNA Tc2 7 136 -45 2 658 198 0 0 0 chrX 9665808 9665830 -156984466 + (TCTA)n Simple_repeat Simple_repeat 1 22 0 2 658 422 296 0 42 chrX 9666900 9667020 -156983276 + PB1D10 SINE Alu 2 116 -1 2 658 304 314 103 67 chrX 9667052 9667372 -156982924 + ORR1E LTR MaLR 50 370 0 2 658 494 184 78 31 chrX 9667797 9667973 -156982323 - Lx4B LINE L1 -4 7054 6882 2 658 626 298 61 79 chrX 9668652 9669053 -156981243 + L1ME3B LINE L1 5555 5960 -280 2 658 4010 51 0 2 chrX 9669053 9669522 -156980774 + L1_Mus2 LINE L1 6097 6564 -2 2 658 626 298 61 79 chrX 9669522 9669626 -156980670 + L1ME3B LINE L1 5961 6051 -189 2 658 643 126 311 0 chrX 9670617 9670677 -156979619 + Lx9 LINE L1 7419 7490 -154 2 658 297 0 0 0 chrX 9670677 9670710 -156979586 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 658 643 126 311 0 chrX 9670710 9670816 -156979480 + Lx9 LINE L1 7491 7636 -8 2 658 346 325 118 0 chrX 9670985 9671188 -156979108 - MER112 DNA MER1_type -7 254 28 2 658 358 368 90 40 chrX 9671291 9671568 -156978728 - LTR16C LTR ERVL 0 538 248 2 658 182 263 47 112 chrX 9671710 9671817 -156978479 + L3 LINE CR1 2006 2105 -2384 2 658 1059 88 0 0 chrX 9672221 9672369 -156977927 + (GAGAA)n Simple_repeat Simple_repeat 3 150 0 2 658 297 0 0 0 chrX 9672797 9672830 -156977466 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 658 576 42 0 0 chrX 9672830 9672900 -156977396 + (GA)n Simple_repeat Simple_repeat 1 71 0 2 658 392 206 155 0 chrX 9673410 9673507 -156976789 - B1F1 SINE Alu -15 134 23 2 658 480 62 0 0 chrX 9673727 9673791 -156976505 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 658 268 226 71 0 chrX 9673891 9673975 -156976321 - L1ME3A LINE L1 -48 6125 6036 2 658 529 332 29 41 chrX 9674081 9674207 -156976089 + B4A SINE B4 8 133 -159 2 658 2045 95 51 98 chrX 9674207 9674637 -156975659 - RMER17C LTR ERVK 0 410 1 2 658 529 332 29 41 chrX 9674637 9674738 -156975558 + B4A SINE B4 134 234 -58 2 658 398 114 0 14 chrX 9674738 9674809 -156975487 + (CA)n Simple_repeat Simple_repeat 2 71 0 2 658 529 332 29 41 chrX 9674809 9674825 -156975471 + B4A SINE B4 235 248 -44 2 658 1174 191 246 20 chrX 9675096 9675401 -156974895 - ORR1D1 LTR MaLR 0 374 1 2 658 664 294 43 0 chrX 9675662 9675849 -156974447 + B3 SINE B2 1 195 -21 2 658 378 0 0 0 chrX 9675861 9675903 -156974393 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 2 658 195 100 0 0 chrX 9676455 9676485 -156973811 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 658 671 304 6 17 chrX 9676489 9676663 -156973633 - B3A SINE B2 -26 172 1 2 658 410 245 61 109 chrX 9676934 9677163 -156973133 + L1MD LINE L1 4402 4619 -1527 2 658 284 351 26 13 chrX 9677348 9677504 -156972792 + Lx9 LINE L1 5785 5942 -1702 2 658 417 39 0 0 chrX 9677752 9677803 -156972493 + (CATA)n Simple_repeat Simple_repeat 2 52 0 2 658 756 315 59 3 chrX 9678637 9678959 -156971337 - L1MC LINE L1 -823 5323 4984 2 658 527 307 68 121 chrX 9679160 9679482 -156970814 - ORR1E LTR MaLR 0 359 55 2 658 315 312 55 23 chrX 9679494 9679622 -156970674 - MLT1A1 LTR MaLR -276 132 1 2 658 310 305 81 58 chrX 9679816 9679990 -156970306 + MLT1G1 LTR MaLR 103 280 -269 2 658 371 341 96 18 chrX 9680065 9680232 -156970064 + MLT1G1 LTR MaLR 373 552 -27 2 658 410 250 114 65 chrX 9680364 9680548 -156969748 - LTR16C LTR ERVL -7 482 290 2 658 1233 45 33 0 chrX 9680897 9681141 -156969155 + (GAAA)n Simple_repeat Simple_repeat 1 252 0 2 658 837 155 0 0 chrX 9681145 9681293 -156969003 + GA-rich Low_complexity Low_complexity 2 149 0 2 658 329 215 62 12 chrX 9682106 9682186 -156968110 - BC1_Mm scRNA scRNA -68 84 1 2 658 289 313 14 84 chrX 9683165 9683308 -156966988 - MER5A DNA MER1_type -50 139 7 2 658 276 283 58 39 chrX 9683387 9683490 -156966806 - MLT1A1 LTR MaLR 0 408 304 2 658 186 133 0 0 chrX 9684883 9684913 -156965383 + (T)n Simple_repeat Simple_repeat 1 30 0 2 658 909 162 7 0 chrX 9684916 9685058 -156965238 - B1_Mus2 SINE Alu 0 147 5 2 658 259 354 0 0 chrX 9685074 9685153 -156965143 - ID4_ SINE ID -4 79 1 2 658 364 241 97 18 chrX 9685153 9685267 -156965029 - B1F SINE Alu 0 149 27 2 658 198 191 0 0 chrX 9685297 9685344 -156964952 + CT-rich Low_complexity Low_complexity 3 49 0 2 658 909 28 0 0 chrX 9685508 9685616 -156964680 + (GAAA)n Simple_repeat Simple_repeat 3 110 0 2 658 334 301 6 14 chrX 9685869 9685987 -156964309 - MER5A1 DNA MER1_type -26 140 13 2 658 261 83 0 0 chrX 9686301 9686337 -156963959 + (TTC)n Simple_repeat Simple_repeat 2 37 0 2 658 1719 291 92 4 chrX 9686496 9687149 -156963147 + L1MB7 LINE L1 5469 6175 -9 2 658 213 39 0 0 chrX 9688339 9688365 -156961931 + (A)n Simple_repeat Simple_repeat 1 26 0 2 658 539 103 23 0 chrX 9689304 9689391 -156960905 + (TTTC)n Simple_repeat Simple_repeat 2 90 0 2 658 263 306 0 0 chrX 9690702 9690764 -156959532 + tRNA-Ala-GCY_ tRNA tRNA 2 63 -12 2 658 239 346 12 0 chrX 9690764 9690778 -156959518 + ID4 SINE ID 7 83 0 2 658 1107 312 14 3 chrX 9691127 9691410 -156958886 + B4A SINE B4 3 288 -4 2 658 231 146 0 0 chrX 9691460 9691501 -156958795 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 658 228 224 57 34 chrX 9692750 9692838 -156957458 + Lx9 LINE L1 7554 7643 -1 2 658 200 242 30 15 chrX 9693149 9693216 -156957080 + GA-rich Low_complexity Low_complexity 2 69 0 2 658 309 51 0 0 chrX 9693458 9693497 -156956799 + (TCCA)n Simple_repeat Simple_repeat 4 42 0 2 658 206 227 0 0 chrX 9694596 9694640 -156955656 + (CAG)n Simple_repeat Simple_repeat 3 46 0 2 658 270 0 0 0 chrX 9695308 9695338 -156954958 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2 658 2782 274 63 95 chrX 9696020 9697279 -156953017 + Lx4B LINE L1 5822 7041 -17 2 658 192 77 0 0 chrX 9697279 9697305 -156952991 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2 658 2782 274 63 95 chrX 9697305 9697321 -156952975 + Lx4B LINE L1 7042 7056 -2 2 658 533 352 9 14 chrX 9697517 9697736 -156952560 - MER20 DNA MER1_type 0 219 2 2 658 851 153 0 0 chrX 9697757 9697888 -156952408 + B1_Mur4 SINE Alu 20 150 0 2 658 223 200 0 0 chrX 9697955 9697995 -156952301 + PB1D7 SINE Alu 68 107 -13 2 658 195 114 0 0 chrX 9698049 9698084 -156952212 + (ATG)n Simple_repeat Simple_repeat 1 35 0 2 658 189 307 65 43 chrX 9698226 9698318 -156951978 + L3 LINE CR1 3500 3593 -896 2 658 613 27 0 0 chrX 9698430 9698503 -156951793 - MTB LTR MaLR 0 400 328 2 82 8692 30 8 0 chrX 9698503 9699570 -156950726 - MTA_Mm-int LTR MaLR -22 1076 1 2 659 3520 40 0 10 chrX 9699570 9699970 -156950326 - MTA_Mm LTR MaLR 0 396 1 2 659 213 39 0 0 chrX 9700145 9700171 -156950125 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 659 505 240 21 0 chrX 9700468 9700564 -156949732 + PB1D10 SINE Alu 6 103 -14 2 659 279 253 80 1 chrX 9701554 9701675 -156948621 - MER5C DNA MER1_type -151 162 33 2 659 582 297 72 40 chrX 9702233 9702600 -156947696 + L1MCb LINE L1 92 445 -6306 2 659 190 195 49 0 chrX 9702642 9702683 -156947613 + L4 LINE RTE 1715 1757 -272 2 659 4279 94 10 9 chrX 9702797 9703374 -156946922 - L1_Mus3 LINE L1 0 6638 6061 2 659 10872 104 30 6 chrX 9703374 9705495 -156944801 + L1_Mus2 LINE L1 4385 6582 0 2 659 7083 113 41 4 chrX 9705497 9706579 -156943717 + ORR1A2-int LTR MaLR 640 1963 0 2 659 2505 104 0 58 chrX 9706579 9706926 -156943370 + ORR1A2 LTR MaLR 1 327 0 2 659 489 62 0 0 chrX 9707135 9707200 -156943096 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 659 6573 65 34 0 chrX 9708369 9709214 -156941082 + L1_Mus1 LINE L1 5705 6567 0 3 659 325 366 82 5 chrX 9709235 9709419 -156940877 + Lx8 LINE L1 7056 7253 -220 3 659 365 340 75 0 chrX 9709431 9709578 -156940718 + RMER15 LTR ERVL 404 561 -14 3 659 216 369 46 59 chrX 9709867 9710086 -156940210 + L2 LINE L2 2565 2780 -639 3 659 235 306 82 0 chrX 9710414 9710512 -156939784 + MLT1F LTR MaLR 11 116 -463 3 659 236 274 242 0 chrX 9710575 9710699 -156939597 + MLT1F LTR MaLR 391 544 -4 3 659 797 303 57 39 chrX 9711155 9711491 -156938805 + MLT1A0 LTR MaLR 1 342 -23 3 659 1380 103 11 11 chrX 9711520 9711706 -156938590 + B2_Mm2 SINE B2 1 186 -9 3 659 23 0 0 0 chrX 9711949 9711972 -156938324 + AT_rich Low_complexity Low_complexity 1 23 0 3 659 348 289 87 91 chrX 9712021 9712351 -156937945 + ORR1E LTR MaLR 8 353 -26 3 659 1071 243 35 19 chrX 9712352 9712701 -156937595 + RMER16 LTR ERVK 1 313 -220 3 659 484 161 11 0 chrX 9712828 9712915 -156937381 - Lx4B LINE L1 -611 6447 6360 3 659 2629 151 2 32 chrX 9712915 9713346 -156936950 + Lx4B LINE L1 6641 7058 0 3 659 430 283 117 68 chrX 9713650 9713855 -156936441 - ORR1E LTR MaLR -148 222 8 3 659 306 0 0 0 chrX 9714143 9714177 -156936119 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 659 26 74 0 0 chrX 9714668 9714722 -156935574 + AT_rich Low_complexity Low_complexity 1 54 0 3 659 375 23 0 0 chrX 9714945 9714989 -156935307 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 659 195 69 0 0 chrX 9715006 9715035 -156935261 + (T)n Simple_repeat Simple_repeat 1 29 0 3 659 451 396 22 47 chrX 9715172 9715387 -156934909 - LTR16A LTR ERVL -180 271 60 3 659 3882 34 0 127 chrX 9715387 9715931 -156934365 + IAPLTR2_Mm LTR ERVK 1 475 0 3 659 451 396 22 47 chrX 9715931 9715993 -156934303 - LTR16A LTR ERVL -392 59 1 3 659 519 17 0 0 chrX 9716558 9716618 -156933678 + (TA)n Simple_repeat Simple_repeat 1 60 0 3 659 345 100 0 0 chrX 9716619 9716669 -156933627 + (GA)n Simple_repeat Simple_repeat 2 51 0 3 659 267 350 135 54 chrX 9716992 9717288 -156933008 + MLT1J LTR MaLR 22 341 -171 3 659 2237 169 18 3 chrX 9717366 9717757 -156932539 + MTD LTR MaLR 1 397 -22 3 659 1867 143 13 67 chrX 9717754 9718227 -156932069 + RMER17C LTR ERVK 20 439 -519 3 659 310 247 25 25 chrX 9718227 9718306 -156931990 + RMER17C-int LTR ERVK 1 79 -3159 3 659 330 253 11 32 chrX 9718331 9718425 -156931871 + RMER17C-int LTR ERVK 215 306 -2932 3 659 937 189 219 26 chrX 9719117 9719534 -156930762 + RMER17C-int LTR ERVK 1508 2005 -1233 3 659 1093 118 24 0 chrX 9719536 9719705 -156930591 + RMER17C-int LTR ERVK 2170 2342 -896 3 659 2437 130 164 16 chrX 9719726 9720305 -156929991 + RMER17C-int LTR ERVK 2574 3238 0 3 659 1096 166 11 58 chrX 9720305 9720580 -156929716 + RMER17C LTR ERVK 1 262 -148 3 659 465 19 0 0 chrX 9720580 9720634 -156929662 + (CTATA)n Simple_repeat Simple_repeat 1 54 0 3 659 35 24 0 0 chrX 9720860 9720902 -156929394 + AT_rich Low_complexity Low_complexity 1 42 0 3 659 277 359 0 13 chrX 9721510 9721589 -156928707 - B4A SINE B4 -201 91 14 3 659 1312 234 77 0 chrX 9721812 9722086 -156928210 + MTD LTR MaLR 1 295 -124 3 659 257 336 63 9 chrX 9722207 9722318 -156927978 + L1MC LINE L1 5521 5637 -707 3 659 1836 151 65 21 chrX 9722388 9722726 -156927570 + ORR1B1 LTR MaLR 41 393 -1 3 659 674 241 20 60 chrX 9723303 9723502 -156926794 - B4 SINE B4 0 292 102 3 659 418 221 0 40 chrX 9723684 9723783 -156926513 + B3A SINE B2 1 95 -103 3 659 390 42 0 0 chrX 9723795 9723843 -156926453 + (CCA)n Simple_repeat Simple_repeat 3 50 0 3 659 207 0 0 0 chrX 9723843 9723866 -156926430 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 659 207 0 0 0 chrX 9723914 9723937 -156926359 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 659 23 33 0 0 chrX 9723953 9723983 -156926313 + AT_rich Low_complexity Low_complexity 1 30 0 3 659 243 346 71 0 chrX 9723991 9724173 -156926123 - L1MB4 LINE L1 -217 5957 5762 3 659 886 257 0 36 chrX 9724200 9724422 -156925874 - B3 SINE B2 -2 214 1 3 659 271 420 46 29 chrX 9725294 9725532 -156924764 - LTR16A1 LTR ERVL -214 242 1 3 659 855 163 7 14 chrX 9725841 9725984 -156924312 - B1_Mur1 SINE Alu 0 149 8 3 659 546 254 16 77 chrX 9725984 9726022 -156924274 - ID_B1 SINE B4 0 222 53 3 659 939 242 75 59 chrX 9726001 9726308 -156923988 + RMER16 LTR ERVK 222 533 0 3 659 633 27 0 0 chrX 9726424 9726499 -156923797 + (TG)n Simple_repeat Simple_repeat 2 76 0 3 659 1518 252 114 18 chrX 9726637 9727290 -156923006 + Lx6 LINE L1 6455 7460 0 3 659 621 0 0 0 chrX 9727942 9728011 -156922285 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 659 307 305 65 19 chrX 9728455 9728562 -156921734 - PB1D10 SINE Alu -5 112 1 3 659 832 99 0 28 chrX 9728907 9729052 -156921244 - L1Md_F2 LINE L1 0 6582 6442 3 659 2558 294 59 24 chrX 9729586 9730401 -156919895 + MER54A LTR ERVL 64 894 -7 3 659 264 324 155 43 chrX 9730568 9730684 -156919612 + MLT1J1 LTR MaLR 36 164 -280 3 659 4520 81 2 3 chrX 9731144 9731739 -156918557 + L1_Mus1 LINE L1 5969 6562 -5 3 659 2169 101 3 12 chrX 9731738 9732069 -156918227 + L1Md_F2 LINE L1 6254 6581 -1 3 659 365 359 62 21 chrX 9732227 9732405 -156917891 - L1MD1 LINE L1 -247 5995 5811 3 659 986 210 30 4 chrX 9732405 9732635 -156917661 - Lx2B LINE L1 -2 6998 6763 3 659 365 359 62 21 chrX 9732635 9732781 -156917515 - L1MD1 LINE L1 -432 5810 5659 3 659 406 250 0 107 chrX 9732838 9732950 -156917346 - MER20 DNA MER1_type -119 100 1 3 659 1594 214 57 34 chrX 9733124 9733565 -156916731 - Lx9 LINE L1 -4 7640 7190 3 659 337 140 0 0 chrX 9733601 9733651 -156916645 - B1_Mur2 SINE Alu -12 137 88 3 659 498 152 0 0 chrX 9733851 9733943 -156916353 + GA-rich Low_complexity Low_complexity 2 93 0 3 659 230 0 33 0 chrX 9734018 9734048 -156916248 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 659 621 276 20 85 chrX 9734121 9734357 -156915939 - MLT1E LTR MaLR -87 567 344 3 659 469 281 62 6 chrX 9734350 9734511 -156915785 - MLT1E LTR MaLR -482 171 2 3 659 31 0 0 0 chrX 9734572 9734603 -156915693 + AT_rich Low_complexity Low_complexity 1 31 0 3 659 720 236 109 97 chrX 9735111 9735309 -156914987 - B3 SINE B2 0 216 1 3 659 342 0 0 0 chrX 9736991 9737029 -156913267 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3 659 1966 46 19 0 chrX 9737232 9737493 -156912803 + L1Md_F2 LINE L1 6294 6559 -23 3 659 216 0 0 0 chrX 9737493 9737517 -156912779 + (TAA)n Simple_repeat Simple_repeat 1 24 0 3 659 447 295 92 14 chrX 9738124 9738265 -156912031 + B3A SINE B2 3 154 -44 3 659 527 260 37 49 chrX 9738261 9738423 -156911873 + B3 SINE B2 33 192 -24 3 659 380 296 115 11 chrX 9738423 9738614 -156911682 + L1MEd LINE L1 904 1114 -5005 3 659 287 257 54 0 chrX 9738805 9738879 -156911417 - ID4 SINE ID -3 80 3 3 659 1157 69 7 0 chrX 9739232 9739377 -156910919 - B1_Mus1 SINE Alu -1 147 2 3 659 483 191 13 7 chrX 9740112 9740265 -156910031 + CT-rich Low_complexity Low_complexity 1 154 0 3 659 528 16 0 0 chrX 9740265 9740326 -156909970 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 659 731 283 136 9 chrX 9740326 9740547 -156909749 - B4A SINE B4 -23 269 21 3 659 354 225 0 59 chrX 9740670 9740755 -156909541 - ID4 SINE ID -2 81 2 3 659 342 355 60 142 chrX 9741587 9741820 -156908476 + B3A SINE B2 1 214 -2 3 659 439 283 64 14 chrX 9742121 9742261 -156908035 + B1F2 SINE Alu 1 147 -2 3 659 5333 198 80 8 chrX 9744625 9745873 -156904423 + Lx9 LINE L1 6306 7643 -1 3 659 1159 75 10 12 chrX 9746127 9746308 -156903988 + B2_Mm1t SINE B2 1 186 -9 3 659 228 222 37 0 chrX 9746328 9746382 -156903914 - L1MC LINE L1 -801 5532 5477 3 659 276 30 0 0 chrX 9746550 9746583 -156903713 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 659 228 67 0 0 chrX 9746595 9746625 -156903671 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 659 227 204 0 0 chrX 9746657 9746701 -156903595 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 659 197 333 9 81 chrX 9747132 9747243 -156903053 - MIRb SINE MIR -162 106 4 3 659 931 158 173 5 chrX 9747690 9747881 -156902415 - URR1A DNA MER1_type -1 225 3 3 659 218 359 62 14 chrX 9748205 9748349 -156901947 + L2 LINE L2 2667 2817 -602 3 659 558 0 0 0 chrX 9748765 9748827 -156901469 + (GAAAA)n Simple_repeat Simple_repeat 2 63 0 3 659 515 207 110 6 chrX 9749420 9749552 -156900744 + ID_B1 SINE B4 99 240 -52 3 659 387 105 0 0 chrX 9751428 9751485 -156898811 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 659 183 259 0 0 chrX 9752097 9752155 -156898141 + CT-rich Low_complexity Low_complexity 3 60 0 3 659 832 179 6 11 chrX 9752221 9752358 -156897938 + polypyrimidine Low_complexity Low_complexity 44 180 0 3 659 1041 145 0 0 chrX 9752358 9752537 -156897759 + (TCTCCC)n Simple_repeat Simple_repeat 2 180 0 3 659 832 179 6 11 chrX 9752537 9752580 -156897716 + polypyrimidine Low_complexity Low_complexity 1 43 0 3 659 305 285 70 117 chrX 9752585 9752756 -156897540 - HAL1-3A_ME LINE L1 -419 2439 2277 3 659 308 261 0 8 chrX 9752758 9752878 -156897418 + CT-rich Low_complexity Low_complexity 3 121 0 3 659 21 71 0 0 chrX 9755285 9755327 -156894969 + AT_rich Low_complexity Low_complexity 1 42 0 3 659 230 136 23 0 chrX 9755338 9755382 -156894914 + (CAA)n Simple_repeat Simple_repeat 3 47 0 3 659 347 209 31 71 chrX 9756120 9756218 -156894078 - RMER15 LTR ERVL -481 94 1 3 659 235 310 25 66 chrX 9756471 9756592 -156893704 + RMER15 LTR ERVL 70 185 -390 3 659 787 240 9 59 chrX 9756643 9756864 -156893432 + RMER15 LTR ERVL 353 562 -13 3 659 281 323 20 20 chrX 9757351 9757452 -156892844 + B1F1 SINE Alu 41 141 -8 3 659 266 308 27 20 chrX 9757475 9757624 -156892672 + L1M2 LINE L1 2347 2496 -4353 3 659 1919 156 70 34 chrX 9757624 9757982 -156892314 + MTC LTR MaLR 1 371 -50 3 659 282 291 149 14 chrX 9758016 9758291 -156892005 + L1M2 LINE L1 3215 3526 -3319 3 659 2008 162 178 0 chrX 9758373 9758818 -156891478 - RLTR28 LTR ERVL 0 524 1 3 659 585 298 151 0 chrX 9759720 9759925 -156890371 + MLT1F1 LTR MaLR 334 569 0 4 659 7267 51 31 6 chrX 9760111 9761117 -156889179 - L1Md_F2 LINE L1 -3 6579 5549 4 659 2388 102 0 0 chrX 9761446 9761769 -156888527 + ORR1A2 LTR MaLR 1 323 -4 4 659 303 93 0 0 chrX 9762013 9762056 -156888240 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 659 219 157 0 0 chrX 9762058 9762109 -156888187 + (CAGAGA)n Simple_repeat Simple_repeat 4 54 0 4 659 395 381 0 7 chrX 9762207 9762342 -156887954 - MER58A DNA MER1_type -89 135 2 4 659 552 297 12 43 chrX 9763796 9763958 -156886338 - RSINE1 SINE B4 -1 164 8 4 659 5795 104 14 70 chrX 9764137 9765037 -156885259 + Lx LINE L1 379 1254 -5403 4 659 3309 49 2 0 chrX 9765037 9765443 -156884853 + L1Md_F2 LINE L1 6163 6569 -13 4 659 23667 147 18 19 chrX 9765443 9770866 -156879430 + Lx LINE L1 1235 6650 -4 4 659 24 53 0 0 chrX 9770883 9770921 -156879375 + AT_rich Low_complexity Low_complexity 1 38 0 4 659 237 339 92 8 chrX 9771326 9771445 -156878851 - MIRb SINE MIR -106 162 34 4 659 318 326 7 58 chrX 9773372 9773509 -156876787 + RMER12 LTR ERVK 722 851 -471 4 659 213 154 0 0 chrX 9773511 9773550 -156876746 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 659 206 62 31 0 chrX 9774154 9774186 -156876110 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 659 339 309 13 26 chrX 9774376 9774532 -156875764 + Lx9 LINE L1 7330 7483 -161 4 659 22 0 0 0 chrX 9774596 9774618 -156875678 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 797 285 115 43 chrX 9774870 9775218 -156875078 - MTE2a LTR MaLR 0 379 7 4 659 826 152 0 0 chrX 9775398 9775523 -156874773 - B3 SINE B2 -90 126 2 4 659 543 312 6 18 chrX 9776377 9776540 -156873756 - MER20 DNA MER1_type -55 164 4 4 659 501 175 0 0 chrX 9776911 9777014 -156873282 + GA-rich Low_complexity Low_complexity 3 105 0 4 659 3367 46 2 5 chrX 9777948 9778366 -156871930 - L1Md_F2 LINE L1 0 6582 6166 4 659 274 219 45 30 chrX 9778857 9778923 -156871373 - tRNA-Ala-GCY_ tRNA tRNA -4 71 5 4 659 23 68 0 0 chrX 9778959 9779003 -156871293 + AT_rich Low_complexity Low_complexity 1 44 0 4 659 230 286 0 35 chrX 9779730 9779788 -156870508 + ID SINE ID 24 79 -145 4 659 284 309 0 0 chrX 9779802 9779883 -156870413 + (CA)n Simple_repeat Simple_repeat 2 82 0 4 659 4011 88 2 7 chrX 9780686 9781234 -156869062 + L1_Mus1 LINE L1 6023 6567 0 4 659 844 230 6 6 chrX 9781286 9781465 -156868831 - B3A SINE B2 -18 180 2 4 659 21 82 0 0 chrX 9781472 9781521 -156868775 + AT_rich Low_complexity Low_complexity 1 49 0 4 659 1710 91 16 4 chrX 9781662 9781916 -156868380 + L1_Mus3 LINE L1 6379 6635 -3 4 659 1173 56 0 0 chrX 9781995 9782139 -156868157 + B1_Mus1 SINE Alu 5 148 0 4 659 183 42 0 0 chrX 9782140 9782164 -156868132 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 4 659 1651 106 142 3 chrX 9782196 9782383 -156867913 + Lx LINE L1 6313 6518 -136 4 659 204 40 0 0 chrX 9782383 9782408 -156867888 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 4 659 1651 106 142 3 chrX 9782408 9782515 -156867781 + Lx LINE L1 6519 6646 -8 4 659 737 267 55 11 chrX 9782979 9783161 -156867135 - B3A SINE B2 -7 191 2 4 659 252 0 0 0 chrX 9783724 9783752 -156866544 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 659 368 251 79 18 chrX 9783842 9783971 -156866325 - B1F SINE Alu -8 141 6 4 659 231 177 60 4 chrX 9784136 9784199 -156866097 + L2c LINE L2 3278 3363 -63 4 659 790 288 195 5 chrX 9784738 9785143 -156865153 - Lx8 LINE L1 -129 7344 6863 4 659 249 231 207 7 chrX 9786059 9786125 -156864171 - L1MA5 LINE L1 0 6300 6226 4 659 231 114 0 0 chrX 9786125 9786160 -156864136 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 659 249 236 205 11 chrX 9786160 9786254 -156864042 - L1MA5 LINE L1 -75 6225 6112 4 659 523 250 34 27 chrX 9786254 9786402 -156863894 + B1F1 SINE Alu 1 149 0 4 659 236 221 42 56 chrX 9786988 9787060 -156863236 - PB1D9 SINE Alu -7 113 43 4 659 246 293 65 37 chrX 9788369 9788585 -156861711 - L1M5 LINE L1 -1303 4843 4622 4 659 26 64 0 0 chrX 9789794 9789841 -156860455 + AT_rich Low_complexity Low_complexity 1 47 0 4 659 234 0 0 0 chrX 9792565 9792591 -156857705 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 659 232 292 13 40 chrX 9793035 9793110 -156857186 + MER112 DNA MER1_type 4 76 -185 4 659 21 0 0 0 chrX 9793610 9793631 -156856665 + GC_rich Low_complexity Low_complexity 1 21 0 4 659 188 270 118 43 chrX 9795404 9795497 -156854799 - L2 LINE L2 -863 2556 2457 4 659 360 0 0 0 chrX 9795755 9795795 -156854501 + (GA)n Simple_repeat Simple_repeat 1 40 0 4 659 206 286 18 0 chrX 9796431 9796487 -156853809 + MIRb SINE MIR 194 250 -18 4 659 1623 265 75 26 chrX 9796911 9797683 -156852613 + RCHARR1 DNA MER1_type 3 812 -162 4 659 3218 33 15 5 chrX 9798129 9798521 -156851775 + MTA_Mm LTR MaLR 1 396 0 4 659 845 164 10 29 chrX 9798556 9798785 -156851511 - Lx7 LINE L1 -148 7548 7368 4 659 7248 141 50 122 chrX 9798786 9800735 -156849561 - L1_Mur3 LINE L1 -1194 4686 2878 4 659 4906 144 34 38 chrX 9800741 9800905 -156849391 - L1_Mur3 LINE L1 -3662 2218 2067 4 659 243 0 0 0 chrX 9800905 9800932 -156849364 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 659 4906 144 34 38 chrX 9800932 9801094 -156849202 - L1_Mur3 LINE L1 -3814 2066 1907 4 659 293 47 23 0 chrX 9801094 9801137 -156849159 + (TTTG)n Simple_repeat Simple_repeat 3 46 0 4 659 4906 148 72 26 chrX 9801137 9802190 -156848106 - L1_Mur3 LINE L1 -3974 1906 770 4 659 1196 181 9 0 chrX 9802193 9802419 -156847877 + Lx9 LINE L1 6754 6981 -663 4 659 1772 137 119 13 chrX 9802424 9802742 -156847554 + RLTR15 LTR ERVK 6 357 -2 4 659 2853 186 61 2 chrX 9802742 9803365 -156846931 + Lx9 LINE L1 6978 7637 -7 4 659 339 268 99 30 chrX 9803482 9803613 -156846683 - MER5A1 DNA MER1_type -14 152 13 4 659 385 319 76 55 chrX 9803731 9804132 -156846164 + L1M5 LINE L1 5263 5662 -578 4 659 279 305 68 74 chrX 9804350 9804513 -156845783 + ORR1D1 LTR MaLR 211 372 -2 4 659 22 0 0 0 chrX 9804581 9804603 -156845693 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 413 276 21 177 chrX 9804727 9804754 -156845542 + B3A SINE B2 34 58 -140 4 659 2673 140 24 12 chrX 9804754 9805166 -156845130 - MTC LTR MaLR 0 421 5 4 659 486 279 20 164 chrX 9805166 9805289 -156845007 + B3 SINE B2 44 160 -56 4 659 395 36 36 0 chrX 9805291 9805347 -156844949 + (CATA)n Simple_repeat Simple_repeat 1 58 0 4 659 3322 69 20 4 chrX 9805350 9805801 -156844495 + L1Md_F2 LINE L1 6123 6580 -2 4 659 2012 216 72 26 chrX 9806083 9806620 -156843676 + RMER1A Other Other 275 740 -290 4 659 1864 131 30 20 chrX 9806622 9806919 -156843377 + Lx4A LINE L1 6750 7049 -9 4 659 35 24 0 0 chrX 9806932 9806974 -156843322 + AT_rich Low_complexity Low_complexity 1 42 0 4 659 229 379 76 0 chrX 9806992 9807137 -156843159 + L2 LINE L2 2712 2867 -552 4 659 572 206 29 64 chrX 9807355 9807495 -156842801 + B1_Mur4 SINE Alu 14 148 -2 4 659 945 169 7 0 chrX 9807565 9807713 -156842583 + B1_Mur1 SINE Alu 1 149 0 4 659 285 319 29 7 chrX 9807861 9807997 -156842299 + Lx7 LINE L1 5771 5909 -1787 4 659 1169 98 6 0 chrX 9808311 9808485 -156841811 + (TTCTC)n Simple_repeat Simple_repeat 4 178 0 4 659 387 105 0 0 chrX 9808485 9808542 -156841754 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 659 438 286 0 9 chrX 9808673 9808779 -156841517 - PB1D10 SINE Alu -12 105 1 4 659 298 330 0 60 chrX 9808683 9808799 -156841497 - B4A SINE B4 -118 174 66 4 659 1140 156 95 28 chrX 9809131 9809342 -156840954 + URR1B DNA MER1_type 1 225 0 4 659 227 0 91 0 chrX 9809513 9809546 -156840750 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 4 659 1512 207 130 25 chrX 9809546 9809908 -156840388 + MTD LTR MaLR 20 419 0 4 659 187 385 62 0 chrX 9810057 9810218 -156840078 + MIRb SINE MIR 75 245 -23 4 659 391 373 82 54 chrX 9810965 9811356 -156838940 - LTR33 LTR ERVL -20 495 94 4 659 258 275 29 14 chrX 9811746 9811816 -156838480 + ID4 SINE ID 2 72 -11 4 659 426 79 0 0 chrX 9814711 9814774 -156835522 + (GA)n Simple_repeat Simple_repeat 2 64 0 4 659 435 374 49 10 chrX 9815099 9815304 -156834992 + Tigger5 DNA MER2_type 30 242 -2164 4 659 198 0 0 0 chrX 9817722 9817744 -156832552 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 4 659 192 179 0 0 chrX 9817807 9817846 -156832450 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 659 936 316 64 27 chrX 9817886 9818543 -156831753 + L1ME1 LINE L1 5295 5975 -204 4 659 636 309 25 40 chrX 9818802 9818960 -156831336 + B3A SINE B2 3 162 -36 4 659 342 0 0 0 chrX 9818960 9818998 -156831298 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 659 636 309 25 40 chrX 9818998 9819038 -156831258 + B3A SINE B2 163 198 0 4 659 273 373 76 25 chrX 9819293 9819491 -156830805 - MLT1L LTR MaLR -34 576 369 4 659 556 290 100 6 chrX 9819635 9819664 -156830632 - B3A SINE B2 -11 187 151 4 659 243 79 0 0 chrX 9819664 9819702 -156830594 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 659 556 290 100 6 chrX 9819702 9819842 -156830454 - B3A SINE B2 -48 150 3 4 659 809 217 11 21 chrX 9819897 9820085 -156830211 + B2_Mm2 SINE B2 1 186 -9 4 659 865 230 0 6 chrX 9820201 9820380 -156829916 - B3 SINE B2 0 216 39 4 659 311 279 0 29 chrX 9820385 9820455 -156829841 + RLTR20A2 LTR ERVK 511 578 0 4 659 313 300 0 54 chrX 9820474 9820548 -156829748 - RLTR20A2 LTR ERVK -32 546 477 4 659 3673 184 66 39 chrX 9821023 9822068 -156828228 + MYSERV16_I-int LTR ERVK 1 1379 -1463 4 659 5510 140 92 4 chrX 9822073 9822523 -156827773 + MYSERV16_I-int LTR ERVK 1067 1576 -750 4 659 327 49 0 0 chrX 9822523 9822564 -156827732 + (TTA)n Simple_repeat Simple_repeat 3 43 0 4 659 5510 140 92 4 chrX 9822564 9823271 -156827025 + MYSERV16_I-int LTR ERVK 1577 2326 0 4 659 1772 251 32 43 chrX 9823282 9823844 -156826452 + RLTR20A2 LTR ERVK 31 578 0 4 659 318 50 0 0 chrX 9823933 9823973 -156826323 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 659 648 174 11 27 chrX 9823988 9824171 -156826125 + GA-rich Low_complexity Low_complexity 1 180 0 5 659 918 92 28 28 chrX 9824175 9824354 -156825942 + (GGGAGA)n Simple_repeat Simple_repeat 1 179 0 5 659 312 172 0 0 chrX 9824360 9824418 -156825878 + GA-rich Low_complexity Low_complexity 1 58 0 5 659 952 85 43 0 chrX 9825274 9825415 -156824881 - B1_Mus1 SINE Alu 0 148 2 5 659 1705 145 63 17 chrX 9825671 9825973 -156824323 - MTC LTR MaLR -1 420 105 5 659 892 136 0 0 chrX 9825974 9826114 -156824182 - URR1B DNA MER1_type 0 225 86 5 659 587 189 18 18 chrX 9826162 9826275 -156824021 - MTC LTR MaLR -308 113 1 5 659 189 94 0 0 chrX 9826947 9826979 -156823317 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 659 987 32 0 0 chrX 9826982 9827105 -156823191 + (TG)n Simple_repeat Simple_repeat 1 123 0 5 659 1068 289 12 0 chrX 9827228 9827477 -156822819 + MTEa LTR MaLR 1 252 -127 5 659 371 344 26 67 chrX 9827489 9827682 -156822614 + MTEb LTR MaLR 195 379 0 5 659 30 0 0 0 chrX 9829028 9829058 -156821238 + AT_rich Low_complexity Low_complexity 1 30 0 5 659 232 294 0 68 chrX 9829182 9829255 -156821041 + MIRm SINE MIR 205 272 -4 5 82 368 262 83 18 chrX 9830324 9830433 -156819863 + MIRm SINE MIR 35 150 -126 5 660 198 380 15 76 chrX 9830459 9830545 -156819751 - L2b LINE L2 -2 3373 3290 5 660 2461 159 35 0 chrX 9830545 9830948 -156819348 + MTC LTR MaLR 5 421 0 5 660 198 380 15 76 chrX 9830948 9830992 -156819304 - L2b LINE L2 -86 3289 3251 5 660 204 40 0 0 chrX 9831191 9831216 -156819080 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 660 250 320 130 45 chrX 9831624 9831778 -156818518 + MTEa LTR MaLR 199 365 -14 5 660 194 256 63 95 chrX 9833354 9833449 -156816847 - MIR SINE MIR -68 140 49 5 660 253 280 63 8 chrX 9834100 9834226 -156816070 - L1MA6 LINE L1 0 6300 6168 5 660 238 265 88 0 chrX 9834309 9834377 -156815919 + ID SINE ID 5 78 -146 5 660 702 249 45 50 chrX 9834541 9834740 -156815556 + B3A SINE B2 1 198 0 5 660 1054 347 20 0 chrX 9835659 9836054 -156814242 + Tigger6a DNA MER2_type 433 835 -248 5 660 249 33 0 0 chrX 9836055 9836085 -156814211 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 660 505 284 19 19 chrX 9836114 9836272 -156814024 + Tigger6a DNA MER2_type 908 1065 -18 5 660 281 333 0 8 chrX 9836312 9836445 -156813851 + L1MA7 LINE L1 5860 5991 -300 5 660 572 108 21 0 chrX 9836988 9837081 -156813215 + (TTCC)n Simple_repeat Simple_repeat 4 98 0 5 660 238 36 0 0 chrX 9837081 9837109 -156813187 + (TC)n Simple_repeat Simple_repeat 2 29 0 5 660 2254 48 10 3 chrX 9837975 9838266 -156812030 - L1Md_A LINE L1 -2 6580 6288 5 660 213 120 19 39 chrX 9838591 9838643 -156811653 + (TAA)n Simple_repeat Simple_repeat 3 53 0 5 660 252 215 0 0 chrX 9838674 9838739 -156811557 + Lx5 LINE L1 6299 6363 -687 5 660 654 302 53 60 chrX 9838736 9839021 -156811275 + Lx5 LINE L1 6479 6761 -289 5 660 634 324 50 0 chrX 9839023 9839202 -156811094 - B3A SINE B2 -10 188 1 5 660 420 71 0 0 chrX 9840166 9840222 -156810074 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 660 650 235 134 3 chrX 9840242 9840549 -156809747 + L1MA8 LINE L1 5708 6054 -237 5 660 1156 44 37 12 chrX 9840633 9840794 -156809502 - L1Md_F3 LINE L1 -15 6569 6405 5 660 341 313 77 39 chrX 9841512 9841709 -156808587 - MIR SINE MIR -44 224 21 5 660 249 33 0 0 chrX 9842682 9842712 -156807584 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 660 670 194 69 8 chrX 9842713 9842843 -156807453 - B1_Mur1 SINE Alu -11 138 1 5 660 270 0 0 0 chrX 9842848 9842878 -156807418 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 5 660 1368 44 17 0 chrX 9842924 9843105 -156807191 - L1Md_A LINE L1 -1 6581 6398 5 660 544 252 45 8 chrX 9843617 9843749 -156806547 + ID_B1 SINE B4 85 221 -3 5 660 790 259 52 55 chrX 9846819 9847182 -156803114 - L1ME3A LINE L1 -16 6157 5796 5 660 2046 201 17 15 chrX 9847944 9848352 -156801944 + MTC LTR MaLR 13 421 0 5 660 966 285 21 55 chrX 9848619 9848931 -156801365 - B4 SINE B4 0 292 9 5 660 196 318 0 44 chrX 9848950 9849047 -156801249 + L2b LINE L2 3313 3422 -4 5 660 433 316 5 54 chrX 9849282 9849466 -156800830 - L2a LINE L2 -4 3422 3248 5 660 774 347 111 80 chrX 9849541 9850477 -156799819 - L2a LINE L2 -538 2881 1917 5 660 265 333 149 45 chrX 9850910 9851152 -156799144 + L2 LINE L2 2627 2893 -526 5 660 1932 204 16 82 chrX 9851957 9852395 -156797901 - MTC LTR MaLR 0 421 13 5 660 1488 227 80 65 chrX 9854039 9854440 -156795856 - MTD LTR MaLR 0 419 13 5 660 669 309 39 0 chrX 9854487 9854691 -156795605 - B3 SINE B2 -4 212 1 5 660 23 54 0 0 chrX 9854715 9854752 -156795544 + AT_rich Low_complexity Low_complexity 1 37 0 5 660 187 250 264 0 chrX 9854841 9854913 -156795383 - MIR SINE MIR -3 259 169 5 660 7737 76 26 1 chrX 9855156 9856969 -156793327 - L1Md_F3 LINE L1 0 6584 4670 5 660 1389 329 50 35 chrX 9858301 9858840 -156791456 - MER68 LTR ERVL -4 559 13 5 660 396 0 0 0 chrX 9858957 9859001 -156791295 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 660 288 111 0 0 chrX 9859001 9859055 -156791241 + (GA)n Simple_repeat Simple_repeat 2 55 0 5 660 710 256 0 8 chrX 9859066 9859200 -156791096 - RSINE1 SINE B4 -31 134 2 5 660 2895 126 83 20 chrX 9859291 9859784 -156790512 - RLTR28 LTR ERVL 0 524 1 5 660 994 293 3 62 chrX 9859995 9860272 -156790024 + B4A SINE B4 5 269 -23 5 660 318 26 0 0 chrX 9860272 9860311 -156789985 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 660 994 293 3 62 chrX 9860311 9860339 -156789957 + B4A SINE B4 270 292 0 5 660 333 0 0 0 chrX 9860517 9860554 -156789742 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 660 292 325 48 32 chrX 9861851 9861975 -156788321 + B1_Mur3 SINE Alu 1 126 -23 5 660 1155 279 85 32 chrX 9862088 9862804 -156787492 - L1MB1 LINE L1 -165 6024 5271 5 660 657 298 68 119 chrX 9863223 9863329 -156786967 - MER68 LTR ERVL 0 563 464 5 660 363 289 0 0 chrX 9863329 9863405 -156786891 + ID4 SINE ID 2 77 -6 5 660 657 301 78 118 chrX 9863405 9863826 -156786470 - MER68 LTR ERVL -100 463 1 5 660 443 296 97 15 chrX 9864869 9865075 -156785221 - MLT1C LTR MaLR -164 303 81 5 660 749 170 73 11 chrX 9865104 9865282 -156785014 - Lx5 LINE L1 -3 7047 6859 5 660 372 265 145 28 chrX 9865737 9865929 -156784367 + MIRb SINE MIR 1 205 -57 5 660 432 128 0 0 chrX 9866494 9866572 -156783724 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 5 660 1833 27 9 5 chrX 9866648 9866872 -156783424 - L1Md_F3 LINE L1 -14 6570 6346 5 660 870 66 0 0 chrX 9866872 9866993 -156783303 + L1_Mm LINE L1 3519 3639 -2244 5 660 513 0 0 0 chrX 9867316 9867373 -156782923 + (GTTTG)n Simple_repeat Simple_repeat 2 58 0 5 660 1079 73 0 0 chrX 9867373 9867509 -156782787 - B1_Mus1 SINE Alu -9 139 4 5 660 288 0 0 0 chrX 9867910 9867942 -156782354 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 5 660 587 250 38 27 chrX 9868103 9868288 -156782008 - B2_Mm2 SINE B2 -8 187 1 5 660 222 314 0 0 chrX 9868718 9868769 -156781527 - ID4_ SINE ID -30 53 3 5 660 401 299 46 30 chrX 9868787 9868918 -156781378 - B1F SINE Alu -8 141 9 5 660 335 303 19 62 chrX 9870024 9870186 -156780110 + MER5A1 DNA MER1_type 2 156 -10 5 660 261 214 36 0 chrX 9870211 9870267 -156780029 + ID4 SINE ID 2 59 -24 5 660 245 258 30 0 chrX 9870854 9870920 -156779376 - MLT1D LTR MaLR -131 374 307 5 660 266 286 18 0 chrX 9871091 9871147 -156779149 - MLT1D LTR MaLR -448 57 1 5 660 241 245 30 10 chrX 9871605 9871704 -156778592 + (TA)n Simple_repeat Simple_repeat 2 102 0 5 660 343 282 67 47 chrX 9871841 9871990 -156778306 - L1MC4a LINE L1 -903 6979 6828 5 660 288 0 0 0 chrX 9872231 9872263 -156778033 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 660 496 294 0 0 chrX 9872499 9872608 -156777688 - PB1D7 SINE Alu -11 109 1 5 660 599 316 28 39 chrX 9872608 9872688 -156777608 - ID SINE ID -146 78 1 5 660 242 278 122 0 chrX 9873076 9873191 -156777105 + MLT1A1 LTR MaLR 6 134 -274 5 660 3321 139 23 23 chrX 9873272 9873837 -156776459 - RLTR1D LTR ERV1 -16 589 25 5 660 824 73 0 21 chrX 9874041 9874181 -156776115 - L1Md_F2 LINE L1 0 6582 6446 5 660 3287 84 52 12 chrX 9874343 9874826 -156775470 - RLTR44C LTR ERVK 0 502 1 5 660 319 282 72 64 chrX 9875186 9875311 -156774985 - MER5A1 DNA MER1_type -8 158 33 5 660 233 402 0 59 chrX 9875409 9875544 -156774752 - MER5B DNA MER1_type -48 130 4 5 660 25 0 0 0 chrX 9875546 9875571 -156774725 + AT_rich Low_complexity Low_complexity 1 25 0 5 660 1174 280 58 13 chrX 9875583 9876050 -156774246 - Lx8 LINE L1 -28 7445 6958 5 660 293 347 6 40 chrX 9876252 9876429 -156773867 + Charlie18a DNA MER1_type 169 339 -3 5 660 448 312 159 42 chrX 9876577 9877005 -156773291 - LTR16B1 LTR ERVL -2 478 1 5 660 203 196 20 0 chrX 9877809 9877860 -156772436 + T-rich Low_complexity Low_complexity 4 55 0 5 660 932 281 43 27 chrX 9877945 9878314 -156771982 + MTE2b LTR MaLR 1 375 -4 5 660 23 0 0 0 chrX 9878432 9878455 -156771841 + AT_rich Low_complexity Low_complexity 1 23 0 5 660 315 294 43 0 chrX 9878985 9879077 -156771219 + MIRb SINE MIR 26 121 -147 5 660 246 171 0 0 chrX 9879230 9879300 -156770996 + (TGGA)n Simple_repeat Simple_repeat 2 71 0 5 660 25 65 0 0 chrX 9879374 9879420 -156770876 + AT_rich Low_complexity Low_complexity 1 46 0 5 660 295 291 0 0 chrX 9879436 9879515 -156770781 - ID4 SINE ID 0 83 5 5 660 1547 55 5 0 chrX 9879811 9880013 -156770283 - L1Md_F2 LINE L1 -12 6570 6368 6 660 181 329 50 12 chrX 9880031 9880111 -156770185 + L2a LINE L2 3307 3389 -37 6 660 458 143 0 11 chrX 9881203 9881295 -156769001 + CT-rich Low_complexity Low_complexity 1 91 0 6 660 522 0 0 0 chrX 9881295 9881353 -156768943 + (TA)n Simple_repeat Simple_repeat 2 59 0 6 660 308 300 36 18 chrX 9882080 9882192 -156768104 - MER81 DNA AcHobo 0 114 1 6 660 364 309 135 85 chrX 9882548 9882866 -156767430 - MLT1C LTR MaLR -4 386 53 6 660 258 304 12 60 chrX 9882873 9882957 -156767339 - ID4 SINE ID -2 81 2 6 660 1110 349 24 56 chrX 9884344 9884808 -156765488 - LTR16A LTR ERVL 0 451 3 6 660 189 0 0 0 chrX 9886345 9886366 -156763930 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 6 660 309 240 0 95 chrX 9886704 9886809 -156763487 - ID4 SINE ID -54 98 7 6 660 379 246 74 33 chrX 9886873 9886995 -156763301 - MER5A DNA MER1_type -62 127 1 6 660 1189 196 9 0 chrX 9887398 9887612 -156762684 - B3 SINE B2 0 216 1 6 660 2177 78 0 75 chrX 9887903 9888234 -156762062 - L1_Mus2 LINE L1 -1 6565 6260 6 660 546 302 12 30 chrX 9889825 9889989 -156760307 - RSINE1 SINE B4 -1 164 4 6 660 3180 82 5 0 chrX 9890125 9890552 -156759744 - L1_Mus3 LINE L1 -6 6632 6204 6 660 188 244 22 0 chrX 9890590 9890635 -156759661 + L2a LINE L2 3364 3409 -17 6 660 400 266 46 15 chrX 9891588 9891718 -156758578 - MER5A1 DNA MER1_type -32 134 1 6 660 212 315 100 71 chrX 9892156 9892296 -156758000 + MIR3 SINE MIR 2 145 -63 6 660 260 309 73 78 chrX 9892810 9892989 -156757307 + MER3 DNA MER1_type 31 208 -1 6 660 683 242 63 54 chrX 9892829 9893034 -156757262 - MER3 DNA MER1_type -1 208 2 6 660 433 239 65 0 chrX 9893557 9893695 -156756601 - MER53 DNA hAT -6 187 41 6 660 189 0 0 0 chrX 9893722 9893743 -156756553 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 6 660 1167 57 0 0 chrX 9894229 9894369 -156755927 + B1_Mus2 SINE Alu 1 140 -7 6 660 344 298 49 71 chrX 9894716 9894900 -156755396 + B3A SINE B2 2 181 -17 6 660 3586 154 22 16 chrX 9894975 9895613 -156754683 + RLTR26 LTR ERVK 1 642 0 6 660 411 189 74 12 chrX 9895936 9896357 -156753939 + (TA)n Simple_repeat Simple_repeat 1 447 0 6 660 227 79 26 0 chrX 9897054 9897092 -156753204 + (CAA)n Simple_repeat Simple_repeat 2 40 0 6 660 23 54 0 0 chrX 9897947 9897984 -156752312 + AT_rich Low_complexity Low_complexity 1 37 0 6 660 16918 91 278 12 chrX 9898175 9902400 -156747896 + L1Md_F2 LINE L1 242 5585 -298 6 660 7350 81 5 5 chrX 9902401 9903395 -156746901 + L1Md_F2 LINE L1 5587 6580 -2 6 660 593 304 70 33 chrX 9903635 9903907 -156746389 + B4A SINE B4 1 282 -10 6 660 3440 33 0 0 chrX 9904354 9904750 -156745546 - MTA_Mm LTR MaLR 0 396 1 6 660 1846 274 29 54 chrX 9904958 9905417 -156744879 - Lx6 LINE L1 -30 7430 6962 6 660 1164 55 7 0 chrX 9905417 9905563 -156744733 - B1_Mus1 SINE Alu -1 147 1 6 660 186 43 0 0 chrX 9905563 9905586 -156744710 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 660 1846 274 29 54 chrX 9905586 9905598 -156744698 - Lx6 LINE L1 -499 6961 6950 6 660 216 0 0 0 chrX 9905598 9905622 -156744674 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 660 1846 274 29 54 chrX 9905622 9905814 -156744482 - Lx6 LINE L1 -511 6949 6778 6 660 1774 156 15 59 chrX 9905814 9906155 -156744141 + ORR1A3 LTR MaLR 1 326 0 6 660 1846 274 29 54 chrX 9906155 9906174 -156744122 - Lx6 LINE L1 -683 6777 6765 6 660 1233 146 9 0 chrX 9906186 9906405 -156743891 - Lx2 LINE L1 -2 6995 6775 6 660 5496 118 46 2 chrX 9906404 9907338 -156742958 - Lx2 LINE L1 -353 6644 5666 6 660 505 125 230 9 chrX 9907337 9907450 -156742846 - Lx2 LINE L1 -638 6359 6222 6 660 411 246 193 66 chrX 9907492 9907807 -156742489 - MTE2b LTR MaLR 0 379 1 6 660 435 282 144 8 chrX 9909109 9909227 -156741069 + LTR16A1 LTR ERVL 321 454 -2 6 660 14431 87 4 2 chrX 9909504 9912366 -156737930 - L1_Mus1 LINE L1 0 6567 3699 6 660 277 344 49 8 chrX 9912474 9912597 -156737699 - MER5A DNA MER1_type -1 188 61 6 660 1454 229 66 18 chrX 9912599 9912991 -156737305 - Lx6 LINE L1 -9 7451 7041 6 660 264 301 102 46 chrX 9913194 9913302 -156736994 + MIRb SINE MIR 144 257 -11 6 660 201 339 62 0 chrX 9913480 9913545 -156736751 + MIRc SINE MIR 141 209 -59 6 660 1102 301 110 46 chrX 9913548 9914094 -156736202 - Charlie1a DNA MER1_type -738 717 137 6 660 910 201 0 12 chrX 9914830 9914991 -156735305 - B3 SINE B2 -6 210 52 6 660 978 150 29 77 chrX 9915170 9915444 -156734852 + Lx9 LINE L1 7377 7637 -7 6 660 223 93 0 44 chrX 9916227 9916272 -156734024 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 6 660 4664 83 8 0 chrX 9916449 9917077 -156733219 + L1_Mus1 LINE L1 5935 6567 0 6 660 796 252 33 47 chrX 9918064 9918276 -156732020 - ORR1D1 LTR MaLR 0 374 166 6 660 488 16 16 0 chrX 9918276 9918337 -156731959 + (GA)n Simple_repeat Simple_repeat 1 62 0 6 660 273 51 26 0 chrX 9918366 9918405 -156731891 - ORR1D1 LTR MaLR -287 87 48 6 660 228 35 0 0 chrX 9918654 9918683 -156731613 + (T)n Simple_repeat Simple_repeat 1 29 0 6 660 671 321 75 45 chrX 9920315 9920582 -156729714 + B4 SINE B4 18 292 0 6 660 333 250 22 33 chrX 9921977 9922068 -156728228 - PB1D10 SINE Alu -7 110 21 6 660 356 411 22 28 chrX 9924276 9924456 -156725840 + LTR33 LTR ERVL 237 415 -100 6 660 311 286 23 105 chrX 9924462 9924595 -156725701 + MTEb LTR MaLR 19 140 -234 6 660 422 278 77 147 chrX 9924628 9924784 -156725512 + MTEb LTR MaLR 226 370 -9 6 660 413 370 29 32 chrX 9925135 9925445 -156724851 - L1MC4 LINE L1 -1032 7010 6702 6 660 4615 86 9 5 chrX 9925703 9926354 -156723942 - L1_Mus3 LINE L1 -5 6633 5980 6 660 25 0 0 0 chrX 9926559 9926584 -156723712 + AT_rich Low_complexity Low_complexity 1 25 0 6 660 242 56 28 0 chrX 9926729 9926765 -156723531 + (TA)n Simple_repeat Simple_repeat 1 37 0 6 660 2796 192 48 16 chrX 9926849 9927416 -156722880 - RMER4B LTR ERVK 0 585 1 6 660 280 241 138 0 chrX 9927595 9927682 -156722614 - L1MC4 LINE L1 -2359 5523 5425 6 660 203 156 0 0 chrX 9927682 9927714 -156722582 + CT-rich Low_complexity Low_complexity 2 33 0 6 660 308 339 85 0 chrX 9927716 9927846 -156722450 - B1F SINE Alu -8 141 1 6 660 7774 219 59 14 chrX 9927998 9930155 -156720141 - Lx6 LINE L1 -5 7455 5196 6 660 1812 121 19 0 chrX 9930153 9930475 -156719821 - L1_Mur3 LINE L1 -4144 1736 1409 6 660 2077 267 54 26 chrX 9930476 9931196 -156719100 - L1_Mur3 LINE L1 -6924 804 65 6 660 222 37 0 0 chrX 9931293 9931320 -156718976 + (CCA)n Simple_repeat Simple_repeat 1 27 0 6 660 3085 268 36 14 chrX 9931331 9932173 -156718123 - Lx7 LINE L1 -377 7319 6460 6 660 220 169 45 0 chrX 9932422 9932511 -156717785 + (CAGAGA)n Simple_repeat Simple_repeat 2 94 0 6 660 419 223 105 18 chrX 9932534 9932648 -156717648 - B2_Mm2 SINE B2 -71 124 1 6 660 1044 202 24 10 chrX 9934151 9934356 -156715940 - B3 SINE B2 -6 210 3 6 660 2067 231 2 2 chrX 9934573 9934985 -156715311 - Lx6 LINE L1 -8 7452 7041 6 660 4477 81 2 2 chrX 9935010 9935604 -156714692 - L1_Mus1 LINE L1 0 6567 5974 6 660 24786 109 6 2 chrX 9935606 9936620 -156713676 - L1_Mm LINE L1 -131 5752 4737 6 660 216 0 0 0 chrX 9936620 9936644 -156713652 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6 660 24786 109 6 2 chrX 9936644 9939497 -156710799 - L1_Mm LINE L1 -1147 4736 1869 6 660 364 291 7 91 chrX 9939574 9939822 -156710474 - L1VL1 LINE L1 -6022 400 45 6 660 1378 186 19 0 chrX 9939865 9940123 -156710173 - L1_Mur3 LINE L1 -83 5797 5535 6 660 1040 191 35 12 chrX 9940118 9940394 -156709902 - L1_Mur3 LINE L1 -4414 1466 1183 6 660 542 234 229 57 chrX 9940401 9940750 -156709546 - L1_Mur3 LINE L1 -6764 964 556 6 660 296 275 138 65 chrX 9940775 9940937 -156709359 - MER5A1 DNA MER1_type -30 159 2 6 660 369 0 0 0 chrX 9942053 9942094 -156708202 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 6 660 233 86 0 0 chrX 9942396 9942431 -156707865 - B1_Mur4 SINE Alu -6 144 110 6 660 372 348 35 0 chrX 9942438 9942579 -156707717 - RSINE1 SINE B4 -18 147 2 6 660 321 305 48 55 chrX 9942583 9942687 -156707609 - L1ME1 LINE L1 -45 6134 6027 6 660 1587 36 0 10 chrX 9942687 9942882 -156707414 - B2_Mm1a SINE B2 0 193 1 6 660 321 305 48 55 chrX 9942882 9943048 -156707248 - L1ME1 LINE L1 -153 6026 5867 6 660 259 185 59 47 chrX 9943364 9943449 -156706847 + RMER20B LTR ERVK 279 364 -263 6 660 1285 198 57 91 chrX 9943587 9943970 -156706326 - ORR1D1 LTR MaLR 0 374 5 6 660 789 196 206 6 chrX 9944002 9944182 -156706114 + B3 SINE B2 1 216 0 6 660 411 252 20 10 chrX 9944531 9944631 -156705665 + RSINE1 SINE B4 5 105 -60 6 660 852 10 0 0 chrX 9944634 9944731 -156705565 + (CA)n Simple_repeat Simple_repeat 2 98 0 6 660 2729 74 5 3 chrX 9945306 9945673 -156704623 - L1_Mus3 LINE L1 -1 6637 6270 6 660 3323 74 41 0 chrX 9945673 9946133 -156704163 + L1_Mus3 LINE L1 5796 6274 -364 6 660 280 276 35 0 chrX 9946179 9946266 -156704030 + MER94 DNA AcHobo 45 134 0 6 660 528 314 19 6 chrX 9946450 9946610 -156703686 + MER5B DNA MER1_type 17 178 0 6 660 801 263 30 0 chrX 9947399 9947597 -156702699 + B3 SINE B2 2 205 -11 6 660 1427 238 138 22 chrX 9948137 9948588 -156701708 - Lx6 LINE L1 -4 7456 6954 6 660 474 127 25 0 chrX 9948591 9948670 -156701626 - Lx7 LINE L1 -765 6931 6851 6 660 4025 93 38 5 chrX 9948695 9949281 -156701015 - L1_Mus3 LINE L1 -1 6637 6033 6 660 186 43 0 0 chrX 9949281 9949304 -156700992 + (T)n Simple_repeat Simple_repeat 1 23 0 6 660 588 184 0 10 chrX 9949584 9949683 -156700613 + MTC LTR MaLR 1 98 -323 6 660 3544 8 0 0 chrX 9949697 9950093 -156700203 - L1Md_A LINE L1 0 6582 6187 6 660 1547 95 0 0 chrX 9950093 9950315 -156699981 - L1_Mus3 LINE L1 -596 6042 5821 6 660 4384 234 66 18 chrX 9950312 9950633 -156699663 - Lx6 LINE L1 -611 6849 6513 6 660 513 0 0 0 chrX 9950633 9950690 -156699606 + (TC)n Simple_repeat Simple_repeat 2 58 0 6 660 14520 167 87 23 chrX 9950690 9953904 -156696392 - Lx6 LINE L1 -948 6512 3044 6 660 1245 186 0 5 chrX 9953904 9954125 -156696171 + URR1B DNA MER1_type 5 224 -1 7 660 14520 152 91 24 chrX 9954125 9954179 -156696117 - Lx6 LINE L1 -2837 3043 3001 6 660 1204 124 16 21 chrX 9954179 9954369 -156695927 - B2_Mm2 SINE B2 -6 189 1 7 660 14520 152 91 24 chrX 9954369 9954627 -156695669 - Lx6 LINE L1 -2880 3000 2743 6 660 369 43 0 0 chrX 9954627 9954674 -156695622 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 660 14520 152 91 24 chrX 9954674 9954934 -156695362 - Lx6 LINE L1 -3138 2742 2469 6 660 4737 170 38 7 chrX 9954937 9956425 -156693871 - Lx6 LINE L1 -4048 1832 296 6 660 783 258 82 9 chrX 9956474 9956705 -156693591 + B4A SINE B4 3 250 -42 7 660 306 0 0 0 chrX 9956743 9956777 -156693519 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 660 357 284 14 63 chrX 9957222 9957365 -156692931 + Lx8 LINE L1 6816 6951 -522 7 660 268 330 103 65 chrX 9957381 9957555 -156692741 - RMER10A LTR ERVL -29 413 237 7 660 423 0 0 0 chrX 9957555 9957602 -156692694 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 660 345 24 0 0 chrX 9957602 9957643 -156692653 + (GA)n Simple_repeat Simple_repeat 2 43 0 7 660 268 330 103 65 chrX 9957643 9957837 -156692459 - RMER10A LTR ERVL -206 236 31 7 660 508 338 14 22 chrX 9957867 9958142 -156692154 + Lx8 LINE L1 6966 7238 -235 7 660 7960 151 4 15 chrX 9958176 9959538 -156690758 - Lx2 LINE L1 0 6997 5651 7 660 3835 183 9 1 chrX 9959519 9960292 -156690004 + Lx2 LINE L1 4897 5675 -211 7 660 1681 132 24 98 chrX 9960820 9961124 -156689172 - ORR1C1 LTR MaLR -8 318 40 7 82 3633 158 102 38 chrX 9961124 9962057 -156688239 - ORR1C1-int LTR MaLR -2 1961 468 7 661 1966 120 44 173 chrX 9962148 9962582 -156687714 - ORR1C1 LTR MaLR 0 378 1 7 661 21 0 0 0 chrX 9962686 9962707 -156687589 + AT_rich Low_complexity Low_complexity 1 21 0 7 661 361 353 45 17 chrX 9963132 9963308 -156686988 + L1M5 LINE L1 3599 3779 -2367 7 661 225 0 0 0 chrX 9963375 9963400 -156686896 + (CAGA)n Simple_repeat Simple_repeat 4 28 0 7 661 851 235 122 11 chrX 9963555 9963744 -156686552 + B3 SINE B2 6 215 -1 7 661 1026 195 0 10 chrX 9964034 9964241 -156686055 + RCHARR1 DNA MER1_type 587 791 -183 7 661 303 325 88 0 chrX 9964372 9964486 -156685810 - HAL1b LINE L1 -773 1236 1113 7 661 207 191 0 0 chrX 9964546 9964588 -156685708 + T-rich Low_complexity Low_complexity 5 46 0 7 661 298 203 0 0 chrX 9964633 9964697 -156685599 + Lx7 LINE L1 7612 7675 -21 7 661 229 282 100 56 chrX 9965242 9965332 -156684964 - LTR50 LTR ERVL -677 118 25 7 661 860 165 29 34 chrX 9965412 9965610 -156684686 + RMER17C LTR ERVK 1 200 -210 7 661 509 30 15 0 chrX 9965610 9965677 -156684619 + (TC)n Simple_repeat Simple_repeat 2 69 0 7 661 860 218 89 1961 chrX 9965677 9965779 -156684517 + RMER17C LTR ERVK 201 401 -9 7 661 236 347 24 32 chrX 9965896 9966021 -156684275 - LTR86A2 LTR ERVL -7 501 378 7 661 1157 29 0 41 chrX 9967268 9967413 -156682883 - B1_Mus2 SINE Alu -7 140 2 7 661 284 326 73 34 chrX 9968457 9968635 -156681661 - MIRb SINE MIR -33 235 51 7 661 23 33 0 0 chrX 9968804 9968834 -156681462 + AT_rich Low_complexity Low_complexity 1 30 0 7 661 443 340 37 104 chrX 9968851 9969163 -156681133 + MLT1F2 LTR MaLR 247 594 -60 7 661 309 286 0 14 chrX 9969964 9970035 -156680261 + MER81 DNA AcHobo 44 113 -1 7 661 832 222 99 33 chrX 9970419 9970661 -156679635 - MTD LTR MaLR -18 401 144 7 661 506 322 73 7 chrX 9970771 9970921 -156679375 - MTE2b LTR MaLR -67 312 153 7 661 279 0 0 0 chrX 9970980 9971011 -156679285 + (T)n Simple_repeat Simple_repeat 1 31 0 7 661 25 31 0 0 chrX 9971080 9971112 -156679184 + AT_rich Low_complexity Low_complexity 1 32 0 7 661 199 191 32 0 chrX 9971217 9971280 -156679016 + CT-rich Low_complexity Low_complexity 4 68 0 7 661 22 70 0 0 chrX 9971403 9971446 -156678850 + AT_rich Low_complexity Low_complexity 1 43 0 7 661 248 243 56 14 chrX 9971554 9971696 -156678600 - L1MC5 LINE L1 -164 7797 7650 7 661 1101 58 0 13 chrX 9972251 9972409 -156677887 - L1Md_F2 LINE L1 0 6582 6427 7 661 23 0 0 0 chrX 9972726 9972749 -156677547 + AT_rich Low_complexity Low_complexity 1 23 0 7 661 817 142 54 43 chrX 9972841 9973025 -156677271 - B2_Mm2 SINE B2 -8 187 2 7 661 28 48 0 0 chrX 9973096 9973138 -156677158 + AT_rich Low_complexity Low_complexity 1 42 0 7 661 237 185 18 36 chrX 9973895 9973951 -156676345 - ORR1E LTR MaLR -19 360 306 7 661 301 277 117 39 chrX 9973981 9974135 -156676161 - ORR1E LTR MaLR -192 167 2 7 661 684 322 79 198 chrX 9974135 9974818 -156675478 - MTE-int LTR MaLR -52 1528 934 7 661 463 272 50 29 chrX 9974818 9974958 -156675338 - B1F2 SINE Alu -6 143 1 7 661 684 322 79 198 chrX 9974958 9975061 -156675235 - MTE-int LTR MaLR -647 933 837 7 661 645 368 90 32 chrX 9975464 9975669 -156674627 - MTE-int LTR MaLR -939 641 421 7 661 756 159 13 88 chrX 9975669 9975815 -156674481 + B1_Mur3 SINE Alu 1 138 -11 7 661 195 42 0 0 chrX 9975815 9975839 -156674457 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 661 756 159 13 88 chrX 9975839 9975851 -156674445 + B1_Mur3 SINE Alu 139 147 -2 7 661 645 368 90 32 chrX 9975851 9976111 -156674185 - MTE-int LTR MaLR -1160 420 150 7 661 324 0 0 0 chrX 9976689 9976725 -156673571 + (TTAA)n Simple_repeat Simple_repeat 3 38 0 7 661 304 303 94 104 chrX 9976758 9976835 -156673461 - LTR16C LTR ERVL 0 489 409 7 661 2047 138 43 3 chrX 9976835 9977162 -156673134 + Lx4A LINE L1 6716 7055 -3 7 661 432 0 0 0 chrX 9977164 9977212 -156673084 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 661 304 303 94 104 chrX 9977212 9977440 -156672856 - LTR16C LTR ERVL -81 408 184 7 661 231 383 0 24 chrX 9977988 9978071 -156672225 - ID2 SINE ID 0 83 3 7 661 193 351 0 13 chrX 9978144 9978222 -156672074 + L2b LINE L2 3299 3375 0 7 661 350 386 81 13 chrX 9978354 9978590 -156671706 - MER90a LTR ERV1 -2 612 361 7 661 337 371 112 22 chrX 9978602 9978825 -156671471 - MER90a LTR ERV1 -366 248 6 7 661 235 125 0 158 chrX 9979048 9979124 -156671172 + T-rich Low_complexity Low_complexity 2 65 0 7 661 1182 56 0 0 chrX 9979443 9979586 -156670710 + B1_Mus2 SINE Alu 1 143 -4 7 661 450 0 0 0 chrX 9979588 9979638 -156670658 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 7 661 524 0 0 0 chrX 9979661 9979723 -156670573 + B1_Mus2 SINE Alu 82 143 -4 7 661 414 0 0 0 chrX 9979725 9979771 -156670525 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 7 661 37251 35 0 0 chrX 9980184 9985597 -156664699 - L1Md_T LINE L1 0 6582 1170 7 661 5195 165 21 27 chrX 9985603 9986717 -156663579 - L1Md_T LINE L1 -5411 1205 99 7 661 356 309 142 27 chrX 9986846 9987029 -156663267 - L1MC4 LINE L1 -376 7666 7463 7 661 480 35 0 0 chrX 9987315 9987373 -156662923 + (TG)n Simple_repeat Simple_repeat 2 59 0 7 661 790 286 67 38 chrX 9987374 9987806 -156662490 - Lx7 LINE L1 -1789 5907 5463 7 661 301 405 0 0 chrX 9987807 9987918 -156662378 - PB1D10 SINE Alu -2 115 5 7 661 232 394 28 19 chrX 9987824 9987930 -156662366 - ID_B1 SINE B4 -45 179 73 7 661 268 267 149 48 chrX 9988946 9989174 -156661122 - MIR SINE MIR -10 252 2 7 661 772 257 29 5 chrX 9990818 9991025 -156659271 + B3 SINE B2 5 216 0 7 661 2267 153 14 21 chrX 9991189 9991622 -156658674 - Lx2B LINE L1 -807 6193 5764 7 661 3161 203 14 3 chrX 9991620 9992385 -156657911 + Lx2B LINE L1 6197 6997 0 7 661 26 0 0 0 chrX 9992630 9992656 -156657640 + AT_rich Low_complexity Low_complexity 1 26 0 7 661 220 396 76 13 chrX 9993007 9993309 -156656987 - L4 LINE RTE -190 1839 1519 7 661 243 301 130 17 chrX 9994676 9994791 -156655505 + MER94 DNA AcHobo 3 130 -4 7 661 298 307 0 11 chrX 9994852 9994941 -156655355 - ID_B1 SINE B4 0 224 137 7 661 315 0 0 0 chrX 9995536 9995571 -156654725 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 661 318 418 63 42 chrX 9995775 9995965 -156654331 - LTR16C LTR ERVL -281 208 15 7 661 842 126 119 11 chrX 9996145 9996330 -156653966 + Lx LINE L1 6449 6653 -1 7 661 662 117 0 9 chrX 9996336 9996448 -156653848 + (GAAAA)n Simple_repeat Simple_repeat 4 114 0 7 661 239 348 76 34 chrX 9996504 9996623 -156653673 + MIRc SINE MIR 3 126 -142 7 661 870 205 78 24 chrX 9996731 9996936 -156653360 + B3 SINE B2 1 216 0 7 661 441 0 0 0 chrX 9997700 9997749 -156652547 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 661 647 252 15 0 chrX 9998152 9998283 -156652013 - ETnERV2-int LTR ERVK -204 7202 7070 7 661 414 0 0 0 chrX 9998283 9998329 -156651967 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 661 292 351 58 17 chrX 9998449 9998540 -156651756 - RMER15 LTR ERVL -15 560 467 7 661 556 14 27 0 chrX 9998540 9998613 -156651683 + (TG)n Simple_repeat Simple_repeat 2 76 0 7 661 292 351 58 17 chrX 9998613 9998695 -156651601 - RMER15 LTR ERVL -109 466 380 7 661 256 281 16 0 chrX 9999383 9999447 -156650849 - L3 LINE CR1 -3 4486 4422 7 661 22 0 0 0 chrX 9999835 9999857 -156650439 + AT_rich Low_complexity Low_complexity 1 22 0 7 661 4222 106 10 0 chrX 10000811 10001405 -156648891 - Lx LINE L1 -6 6648 6049 1 661 247 125 17 51 chrX 10001598 10001657 -156648639 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 2 661 256 352 91 7 chrX 10001962 10002105 -156648191 - MIR SINE MIR -34 228 74 3 661 319 371 53 18 chrX 10002095 10002265 -156648031 + MIRb SINE MIR 43 218 -50 4 661 23 33 0 0 chrX 10002329 10002359 -156647937 + AT_rich Low_complexity Low_complexity 1 30 0 5 661 3383 139 150 23 chrX 10002403 10003057 -156647239 - RMER19A LTR ERVK 0 737 1 6 661 400 317 0 29 chrX 10003154 10003258 -156647038 - RSINE1 SINE B4 -62 103 3 7 661 342 299 0 9 chrX 10003283 10003391 -156646905 - PB1D10 SINE Alu -10 107 1 8 661 852 361 40 49 chrX 10003731 10004159 -156646137 + LTR16A LTR ERVL 21 444 -7 9 661 186 43 0 0 chrX 10005277 10005300 -156644996 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 1 661 604 251 268 22 chrX 10005352 10005666 -156644630 - Lx8 LINE L1 -3 7470 7080 1 661 645 252 0 15 chrX 10005718 10005855 -156644441 - B1F SINE Alu -13 136 2 1 661 220 250 92 15 chrX 10005859 10005924 -156644372 - B1F SINE Alu -13 136 67 1 661 229 234 92 15 chrX 10005872 10005937 -156644359 - ID_B1 SINE B4 -22 202 133 1 661 282 235 29 0 chrX 10006899 10006967 -156643329 + LTR16A1 LTR ERVL 1 70 -386 1 661 432 241 83 74 chrX 10007025 10007146 -156643150 + LTR16A1 LTR ERVL 73 194 -262 1 661 634 244 65 49 chrX 10007366 10007551 -156642745 + LTR16A1 LTR ERVL 202 389 -67 1 661 1198 280 76 38 chrX 10007551 10007845 -156642451 + L1MA9 LINE L1 5484 5794 -518 1 661 360 0 0 0 chrX 10007845 10007885 -156642411 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 661 1198 280 76 38 chrX 10007885 10008276 -156642020 + L1MA9 LINE L1 5795 6194 -118 1 661 288 102 41 0 chrX 10008424 10008473 -156641823 + L1_Mur3 LINE L1 49 99 -7613 1 661 979 224 102 8 chrX 10008482 10008719 -156641577 + Lx7 LINE L1 6986 7248 -448 1 661 2547 47 3 0 chrX 10008719 10009036 -156641260 - L1Md_F2 LINE L1 -1 6581 6264 2 661 979 224 102 8 chrX 10009036 10009064 -156641232 + Lx7 LINE L1 7249 7276 -420 1 661 1012 256 0 75 chrX 10009168 10009489 -156640807 - Lx5 LINE L1 -19 7031 6735 2 661 1154 191 23 82 chrX 10009489 10009831 -156640465 + Lx7 LINE L1 7375 7696 0 1 661 399 17 50 0 chrX 10009943 10010003 -156640293 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 661 399 217 7 104 chrX 10010040 10010194 -156640102 + Lx7 LINE L1 7558 7696 0 2 661 557 207 26 26 chrX 10010444 10010598 -156639698 + L1MD2 LINE L1 37 190 -6357 2 661 386 291 23 8 chrX 10010892 10011020 -156639276 - L1MD2 LINE L1 -5658 889 760 2 661 360 0 0 0 chrX 10011116 10011156 -156639140 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 661 1088 67 0 0 chrX 10011229 10011364 -156638932 + B1_Mus1 SINE Alu 1 135 -13 2 661 180 0 0 0 chrX 10011364 10011384 -156638912 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2 661 21 57 0 0 chrX 10011497 10011532 -156638764 + AT_rich Low_complexity Low_complexity 1 35 0 2 661 34244 64 3 6 chrX 10011549 10017507 -156632789 + L1Md_F2 LINE L1 627 6561 -21 3 661 432 0 0 0 chrX 10017507 10017555 -156632741 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 661 366 278 66 22 chrX 10017560 10017696 -156632600 + L1MD2 LINE L1 1245 1386 -5254 2 661 332 287 6 35 chrX 10017743 10017913 -156632383 + L1MD2 LINE L1 1666 1830 -4810 2 661 389 186 28 63 chrX 10018157 10018300 -156631996 - Lx9 LINE L1 -1 7643 7506 3 661 295 308 16 57 chrX 10018380 10018504 -156631792 - B1F SINE Alu -5 144 26 3 661 1821 243 116 26 chrX 10018614 10019116 -156631180 + RMER15 LTR ERVL 27 573 -2 3 661 210 256 0 0 chrX 10019124 10019163 -156631133 - PB1D7 SINE Alu -75 45 7 3 661 1191 54 0 0 chrX 10019391 10019538 -156630758 + B1_Mus2 SINE Alu 1 147 0 3 661 180 0 0 0 chrX 10019538 10019558 -156630738 + (A)n Simple_repeat Simple_repeat 1 20 0 3 661 2942 164 53 9 chrX 10019558 10020104 -156630192 + RMER4B LTR ERVK 16 585 0 3 661 23 33 0 0 chrX 10020178 10020208 -156630088 + AT_rich Low_complexity Low_complexity 1 30 0 3 661 403 364 49 28 chrX 10020275 10020419 -156629877 - RSINE1 SINE B4 -16 149 3 4 661 219 304 11 70 chrX 10020442 10020544 -156629752 + MIRb SINE MIR 157 256 -12 4 661 185 388 20 30 chrX 10022475 10022576 -156627720 + L3 LINE CR1 1957 2056 -2433 4 661 639 0 0 0 chrX 10022960 10023031 -156627265 + (GA)n Simple_repeat Simple_repeat 2 72 0 4 661 207 0 0 0 chrX 10023927 10023950 -156626346 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 661 1400 73 5 16 chrX 10023974 10024168 -156626128 - B2_Mm1t SINE B2 0 193 2 4 661 1329 55 0 0 chrX 10024262 10024425 -156625871 - B2_Mm2 SINE B2 -31 164 2 4 661 845 244 243 18 chrX 10024450 10024792 -156625504 - MTD LTR MaLR 0 419 1 4 661 247 358 75 82 chrX 10025190 10025324 -156624972 + LTR16C LTR ERVL 148 280 -209 4 661 417 275 80 0 chrX 10025374 10025512 -156624784 - Cheshire DNA MER1_type -2162 258 110 4 661 1392 58 35 0 chrX 10025760 10025934 -156624362 + B2_Mm2 SINE B2 1 180 -15 5 661 341 297 139 35 chrX 10026143 10026345 -156623951 + LTR16C LTR ERVL 267 489 0 4 661 543 16 0 0 chrX 10028086 10028150 -156622146 + (CA)n Simple_repeat Simple_repeat 2 65 0 5 661 384 200 0 0 chrX 10029137 10029217 -156621079 + (TA)n Simple_repeat Simple_repeat 2 81 0 5 661 1183 72 59 12 chrX 10029479 10029648 -156620648 - B2_Mm2 SINE B2 -18 177 1 5 661 239 151 11 27 chrX 10030320 10030380 -156619916 - MIRc SINE MIR -45 163 104 5 661 486 0 0 0 chrX 10031343 10031397 -156618899 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 661 24 0 0 0 chrX 10031831 10031855 -156618441 + AT_rich Low_complexity Low_complexity 1 24 0 5 661 269 309 93 93 chrX 10031990 10032077 -156618219 - MLT2F LTR ERVL -87 576 477 5 661 282 29 0 0 chrX 10032077 10032112 -156618184 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 661 316 20 38 38 chrX 10032113 10032166 -156618130 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 5 661 269 309 93 93 chrX 10032166 10032215 -156618081 - MLT2F LTR ERVL -187 476 438 5 661 504 0 0 0 chrX 10032632 10032688 -156617608 + (TC)n Simple_repeat Simple_repeat 1 56 0 6 661 375 23 0 0 chrX 10032688 10032731 -156617565 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 661 410 329 24 53 chrX 10032874 10033044 -156617252 + MLT1G1 LTR MaLR 413 577 -2 6 661 405 271 88 62 chrX 10033180 10033373 -156616923 - B3A SINE B2 0 198 1 6 661 554 292 79 8 chrX 10033389 10033592 -156616704 - L1MD2 LINE L1 -11 6348 6133 6 661 354 98 0 0 chrX 10033592 10033643 -156616653 + (TATG)n Simple_repeat Simple_repeat 2 52 0 6 661 554 292 79 8 chrX 10033643 10033691 -156616605 - L1MD2 LINE L1 -227 6132 6079 6 661 462 250 6 159 chrX 10033691 10033867 -156616429 - B4A SINE B4 -143 149 1 6 661 729 298 101 32 chrX 10034769 10035303 -156614993 + L1ME2z LINE L1 5385 5955 -489 6 661 430 331 22 15 chrX 10035322 10035457 -156614839 + B1F1 SINE Alu 6 141 -8 6 661 2173 171 49 18 chrX 10035603 10035991 -156614305 + Lx4A LINE L1 6659 7058 0 6 661 21 0 0 0 chrX 10035991 10036012 -156614284 + AT_rich Low_complexity Low_complexity 1 21 0 7 661 1554 129 160 20 chrX 10036628 10036928 -156613368 - MTC LTR MaLR -75 346 5 7 661 240 267 93 0 chrX 10037173 10037248 -156613048 - MLT1K LTR MaLR -495 100 19 7 661 252 0 0 0 chrX 10037592 10037620 -156612676 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 7 661 184 161 0 0 chrX 10037699 10037730 -156612566 + L3 LINE CR1 2807 2837 -1652 7 661 707 277 118 122 chrX 10037921 10038529 -156611767 - BLACKJACK DNA AcHobo -1263 1681 1076 7 661 599 279 7 0 chrX 10038558 10038694 -156611602 + ID_B1 SINE B4 86 222 -2 7 661 344 306 146 35 chrX 10038732 10038975 -156611321 - BLACKJACK DNA AcHobo -1914 1030 760 7 661 296 265 256 58 chrX 10038975 10039137 -156611159 + MER58A DNA MER1_type 4 197 -27 7 661 433 370 62 15 chrX 10039246 10039441 -156610855 - MER20 DNA MER1_type -9 210 7 7 661 766 289 0 16 chrX 10039496 10039689 -156610607 - B3A SINE B2 0 198 9 7 661 1092 113 57 0 chrX 10039836 10040013 -156610283 + B2_Mm2 SINE B2 1 187 -8 8 661 2622 163 7 9 chrX 10040033 10040429 -156609867 - MTC LTR MaLR 0 421 27 8 661 2516 63 3 18 chrX 10040429 10040768 -156609528 + L1_Mus2 LINE L1 6233 6566 0 8 661 2622 163 7 9 chrX 10040768 10040793 -156609503 - MTC LTR MaLR -395 26 1 8 661 379 308 101 73 chrX 10041011 10041298 -156608998 + ORR1E LTR MaLR 64 358 -1 8 661 225 0 0 0 chrX 10042054 10042079 -156608217 + (TC)n Simple_repeat Simple_repeat 1 25 0 8 661 456 256 79 8 chrX 10042087 10042213 -156608083 - B1F SINE Alu -10 139 5 8 661 549 296 63 26 chrX 10042437 10042628 -156607668 + B3A SINE B2 1 198 0 8 661 183 296 54 40 chrX 10043009 10043083 -156607213 - L2b LINE L2 -8 3367 3293 8 661 1201 220 92 22 chrX 10043782 10044098 -156606198 - ORR1E LTR MaLR 0 359 22 8 661 387 0 0 0 chrX 10044252 10044295 -156606001 + (GTTTG)n Simple_repeat Simple_repeat 2 44 0 8 661 503 246 179 93 chrX 10044500 10044813 -156605483 - ORR1E LTR MaLR -2 357 18 9 661 715 275 10 16 chrX 10045518 10045710 -156604586 + RMER15 LTR ERVL 279 469 -106 9 661 439 317 90 85 chrX 10045819 10045967 -156604329 - L1MC4a LINE L1 -1939 5943 5815 9 661 712 188 22 22 chrX 10045967 10046103 -156604193 - B1_Mur3 SINE Alu -10 139 4 9 661 439 317 90 85 chrX 10046103 10046319 -156603977 - L1MC4a LINE L1 -2068 5814 5577 9 661 510 315 33 7 chrX 10047433 10047583 -156602713 - RSINE1 SINE B4 -4 161 8 9 661 1034 141 6 6 chrX 10048257 10048435 -156601861 + Lx2 LINE L1 6820 6997 0 9 661 284 310 25 17 chrX 10048821 10048939 -156601357 - LTR33A LTR ERVL 0 531 413 9 661 778 340 105 14 chrX 10049030 10049382 -156600914 - MLT1H LTR MaLR -88 461 78 9 661 2916 38 6 0 chrX 10049444 10049788 -156600508 - ORR1A1 LTR MaLR 0 346 1 9 661 12888 55 46 2 chrX 10049788 10051504 -156598792 - ORR1A1-int LTR MaLR 0 1792 2 9 661 1844 32 0 0 chrX 10051504 10051724 -156598572 - ORR1A1 LTR MaLR -1 345 126 9 661 411 316 102 45 chrX 10051988 10052283 -156598013 - LTR33A LTR ERVL -155 360 54 9 661 199 257 39 51 chrX 10052982 10053060 -156597236 + L2a LINE L2 3282 3358 -68 9 661 1258 171 13 22 chrX 10053071 10053298 -156596998 + URR1A DNA MER1_type 2 226 0 1 661 405 290 19 9 chrX 10053378 10053486 -156596810 - PB1D10 SINE Alu -8 109 1 1 661 248 312 63 21 chrX 10053407 10053502 -156596794 - B4A SINE B4 -123 169 71 1 661 851 169 13 20 chrX 10053555 10053706 -156596590 - B1_Mur4 SINE Alu 0 150 1 1 661 291 28 0 0 chrX 10053708 10053744 -156596552 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 661 1112 52 0 0 chrX 10053744 10053880 -156596416 - B1_Mus2 SINE Alu -11 136 1 1 661 848 278 0 0 chrX 10053970 10054179 -156596117 + B3 SINE B2 2 210 -6 1 661 255 61 0 0 chrX 10054212 10054245 -156596051 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 1 661 759 256 285 12 chrX 10054773 10055089 -156595207 + MTD LTR MaLR 18 419 0 1 661 715 238 13 26 chrX 10055300 10055451 -156594845 - B1F SINE Alu 0 149 1 1 661 254 305 53 15 chrX 10055772 10055905 -156594391 + MER5B DNA MER1_type 35 172 -6 1 661 442 225 121 23 chrX 10056394 10056526 -156593770 - L2a LINE L2 0 3426 3282 1 661 315 0 0 0 chrX 10056723 10056758 -156593538 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 661 213 313 69 92 chrX 10056850 10057068 -156593228 - L2a LINE L2 -474 2945 2733 1 661 187 260 60 0 chrX 10057249 10057299 -156592997 + L2b LINE L2 3000 3052 -323 1 661 275 150 33 0 chrX 10057319 10057379 -156592917 - L1MB4 LINE L1 -8 6172 6111 1 661 925 242 100 10 chrX 10057373 10057674 -156592622 - L1MB5 LINE L1 -234 5940 5613 1 661 237 268 0 0 chrX 10057716 10057728 -156592568 - MLT1C LTR MaLR -24 481 470 1 661 627 293 30 40 chrX 10057728 10057927 -156592369 - B3A SINE B2 -1 197 1 1 661 306 222 0 14 chrX 10057927 10058000 -156592296 - MLT1C LTR MaLR -37 430 359 1 661 499 226 39 62 chrX 10058005 10058119 -156592177 - MLT1C LTR MaLR -284 183 76 1 661 1888 136 51 56 chrX 10058119 10058531 -156591765 - RMER17C LTR ERVK 0 410 1 1 661 499 226 39 62 chrX 10058531 10058595 -156591701 - MLT1C LTR MaLR -392 75 9 1 661 203 173 0 19 chrX 10059372 10059391 -156590905 + T-rich Low_complexity Low_complexity 36 54 0 1 661 240 35 0 0 chrX 10059391 10059420 -156590876 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 1 661 203 173 0 19 chrX 10059420 10059453 -156590843 + T-rich Low_complexity Low_complexity 4 35 0 1 661 1031 97 0 7 chrX 10059785 10059940 -156590356 + (GAA)n Simple_repeat Simple_repeat 2 155 0 1 661 209 317 74 16 chrX 10060509 10060631 -156589665 + MER5B DNA MER1_type 10 138 -40 1 661 673 299 129 28 chrX 10061010 10061553 -156588743 - L1MB7 LINE L1 -18 6166 5569 1 661 186 174 0 0 chrX 10062188 10062234 -156588062 + C-rich Low_complexity Low_complexity 5 50 0 1 661 23 0 0 0 chrX 10062235 10062258 -156588038 + GC_rich Low_complexity Low_complexity 1 23 0 1 661 23 0 0 0 chrX 10062622 10062645 -156587651 + AT_rich Low_complexity Low_complexity 1 23 0 1 661 309 51 0 0 chrX 10063591 10063630 -156586666 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 1 661 1475 276 66 37 chrX 10064794 10065680 -156584616 - L1MB8 LINE L1 -73 6105 5199 1 661 239 225 14 0 chrX 10065714 10065785 -156584511 + (TATATG)n Simple_repeat Simple_repeat 1 72 0 1 661 201 341 0 0 chrX 10065937 10065981 -156584315 + MIRm SINE MIR 208 251 -25 1 661 473 290 129 54 chrX 10066291 10066477 -156583819 + MER20 DNA MER1_type 4 203 -16 1 661 23 0 0 0 chrX 10067516 10067539 -156582757 + AT_rich Low_complexity Low_complexity 1 23 0 1 661 228 284 22 22 chrX 10067803 10067893 -156582403 - HAL1 LINE L1 -212 2295 2206 1 661 265 336 22 45 chrX 10068161 10068385 -156581911 - HAL1 LINE L1 -722 1785 1567 1 661 24 32 0 0 chrX 10068564 10068595 -156581701 + AT_rich Low_complexity Low_complexity 1 31 0 1 661 1369 145 90 19 chrX 10068694 10068961 -156581335 + Lx LINE L1 6364 6649 -5 1 661 363 283 94 8 chrX 10069478 10069606 -156580690 - HAL1 LINE L1 -2368 139 1 1 661 216 182 0 0 chrX 10069715 10069759 -156580537 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 1 661 544 263 70 0 chrX 10071420 10071534 -156578762 - RSINE1 SINE B4 -41 124 3 1 661 344 322 110 60 chrX 10072071 10072471 -156577825 + L1M5 LINE L1 4160 4579 -1567 1 661 914 326 82 89 chrX 10072627 10073165 -156577131 + MLT1F2 LTR MaLR 20 553 -7 1 661 34 65 0 0 chrX 10073403 10073465 -156576831 + AT_rich Low_complexity Low_complexity 1 62 0 1 661 712 227 28 14 chrX 10073479 10073622 -156576674 + B1_Mus2 SINE Alu 1 145 -2 1 661 207 0 0 0 chrX 10073788 10073811 -156576485 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 1 661 471 346 84 5 chrX 10073970 10074173 -156576123 - MER58A DNA MER1_type -5 219 1 1 661 570 240 131 39 chrX 10074331 10074553 -156575743 + Charlie5 DNA MER1_type 2341 2593 -31 1 661 642 204 30 8 chrX 10074553 10074686 -156575610 + B1F SINE Alu 1 136 -13 1 661 570 240 131 39 chrX 10074686 10074723 -156575573 + Charlie5 DNA MER1_type 2594 2624 0 1 661 22 56 0 0 chrX 10076881 10076917 -156573379 + AT_rich Low_complexity Low_complexity 1 36 0 1 661 189 107 0 0 chrX 10077076 10077104 -156573192 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 661 3430 45 38 0 chrX 10077292 10077719 -156572577 - L1_Mus1 LINE L1 -1 6566 6124 1 661 785 349 66 45 chrX 10077855 10078371 -156571925 - MER34A LTR ERV1 -42 529 3 1 661 314 289 45 45 chrX 10078936 10079070 -156571226 - MIRb SINE MIR -17 251 118 1 661 246 62 0 0 chrX 10080275 10080307 -156569989 + (GA)n Simple_repeat Simple_repeat 2 33 0 1 661 324 0 0 0 chrX 10080481 10080517 -156569779 + (GA)n Simple_repeat Simple_repeat 2 37 0 1 661 871 166 171 0 chrX 10080879 10081072 -156569224 + URR1A DNA MER1_type 1 226 0 1 661 207 0 0 0 chrX 10081133 10081156 -156569140 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 661 203 240 39 20 chrX 10081258 10081309 -156568987 - MIR3 SINE MIR -14 194 143 1 661 495 0 0 0 chrX 10081721 10081776 -156568520 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 661 227 255 20 0 chrX 10082081 10082132 -156568164 - L2b LINE L2 -225 3150 3099 1 661 275 330 10 0 chrX 10084285 10084382 -156565914 + MER20 DNA MER1_type 41 138 -81 1 661 378 0 0 0 chrX 10084610 10084652 -156565644 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 661 1010 208 19 14 chrX 10086070 10086280 -156564016 + B3 SINE B2 1 211 -5 1 661 677 266 17 11 chrX 10086419 10086598 -156563698 + Lx7 LINE L1 7135 7314 -382 1 661 216 0 0 0 chrX 10086645 10086669 -156563627 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 661 426 276 0 0 chrX 10087176 10087263 -156563033 + 5S rRNA rRNA 4 90 -31 1 661 253 344 47 39 chrX 10087180 10087307 -156562989 + AmnSINE1 SINE SINE 8 135 -440 1 661 270 281 137 79 chrX 10087321 10087765 -156562531 - L1MC LINE L1 -2513 3633 3177 1 661 3055 144 37 2 chrX 10087765 10088274 -156562022 + RLTR11A2 LTR ERVK 1 527 0 1 661 270 281 137 79 chrX 10088274 10088451 -156561845 - L1MC LINE L1 -2970 3176 2976 1 661 410 263 0 0 chrX 10088694 10088789 -156561507 + MLT1A1 LTR MaLR 302 396 -12 1 661 290 296 184 31 chrX 10088842 10089065 -156561231 - L1MC4a LINE L1 -1391 6651 6395 1 661 409 197 55 8 chrX 10089101 10089229 -156561067 - Lx7 LINE L1 0 7696 7563 1 661 342 0 0 0 chrX 10089251 10089289 -156561007 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 661 1214 244 112 21 chrX 10089292 10089728 -156560568 - Lx7 LINE L1 -289 7407 6932 1 661 379 298 87 42 chrX 10089753 10090086 -156560210 - L1MC4a LINE L1 -1558 6324 5977 1 661 394 286 77 90 chrX 10090302 10090536 -156559760 - L1MC4a LINE L1 -2019 5863 5633 1 661 620 127 9 0 chrX 10090560 10090670 -156559626 + (GA)n Simple_repeat Simple_repeat 1 111 0 1 661 757 253 13 7 chrX 10090670 10090825 -156559471 - B3A SINE B2 -41 157 2 1 661 21 0 0 0 chrX 10090890 10090911 -156559385 + AT_rich Low_complexity Low_complexity 1 21 0 1 661 405 256 37 52 chrX 10092221 10092357 -156557939 + MER5A1 DNA MER1_type 32 165 -1 1 661 477 0 0 0 chrX 10092410 10092463 -156557833 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 662 1668 350 31 19 chrX 10092712 10093346 -156556950 - MER82 DNA MER2_type -1 652 11 1 662 275 143 20 20 chrX 10094398 10094448 -156555848 - B1_Mur2 SINE Alu -1 148 99 1 662 207 0 0 0 chrX 10095728 10095751 -156554545 + (T)n Simple_repeat Simple_repeat 1 23 0 1 662 384 22 0 0 chrX 10096225 10096270 -156554026 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 662 943 248 14 34 chrX 10096860 10097069 -156553227 + ID_B1 SINE B4 1 205 -19 1 662 242 295 62 48 chrX 10096964 10097110 -156553186 - YREP_Mm Unknown Unknown -1522 290 143 1 662 226 259 69 128 chrX 10097203 10097305 -156552991 + MTE2b LTR MaLR 12 107 -272 1 662 268 319 47 71 chrX 10097365 10097534 -156552762 - MLT1H2 LTR MaLR -5 484 320 1 662 771 151 254 6 chrX 10097594 10097767 -156552529 - B3 SINE B2 0 216 1 1 662 346 369 20 26 chrX 10097775 10097928 -156552368 - MLT1H2 LTR MaLR -335 154 3 1 662 864 252 73 22 chrX 10098308 10098625 -156551671 + L1M4 LINE L1 5326 5658 -520 1 662 695 259 44 39 chrX 10098643 10098824 -156551472 + B3A SINE B2 15 196 -2 1 662 424 240 70 19 chrX 10098805 10098957 -156551339 - MTD LTR MaLR -33 386 162 1 662 180 284 45 0 chrX 10099967 10100034 -156550262 - MER5A DNA MER1_type -94 95 26 1 662 1251 42 24 6 chrX 10100454 10100621 -156549675 - B2_Mm2 SINE B2 -24 171 2 1 662 33833 35 0 0 chrX 10101920 10107412 -156542884 + L1Md_T LINE L1 1 5589 -297 1 662 9002 7 0 0 chrX 10107412 10108408 -156541888 + L1Md_T LINE L1 5590 6585 0 1 662 906 228 63 0 chrX 10108740 10108929 -156541367 - B3 SINE B2 -1 215 15 1 662 22 70 0 0 chrX 10109228 10109271 -156541025 + AT_rich Low_complexity Low_complexity 1 43 0 1 662 557 89 20 0 chrX 10109429 10109530 -156540766 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 1 662 473 154 18 71 chrX 10109553 10109665 -156540631 - L1MA4 LINE L1 -364 5936 5831 1 662 300 291 80 29 chrX 10110937 10111075 -156539221 - L1ME3B LINE L1 -64 6176 6032 1 662 255 125 0 0 chrX 10111551 10111591 -156538705 + (T)n Simple_repeat Simple_repeat 1 40 0 1 662 221 57 29 0 chrX 10111615 10111650 -156538646 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 662 353 347 141 9 chrX 10111666 10111893 -156538403 - HAL1 LINE L1 -629 1878 1622 1 662 231 261 30 30 chrX 10111932 10111999 -156538297 + tRNA-Ala-GCG tRNA tRNA 2 68 -7 2 662 210 281 94 0 chrX 10112371 10112435 -156537861 - B1F2 SINE Alu -64 85 16 2 662 489 280 222 19 chrX 10112606 10112630 -156537666 - HAL1 LINE L1 -1536 971 948 1 662 321 68 0 0 chrX 10112630 10112674 -156537622 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 662 489 280 222 19 chrX 10112674 10113064 -156537232 - HAL1 LINE L1 -1560 947 473 1 662 1080 223 0 10 chrX 10113496 10113704 -156536592 + B3 SINE B2 6 211 -5 2 662 661 156 9 0 chrX 10113749 10113858 -156536438 + B1_Mur4 SINE Alu 41 150 0 2 662 5292 34 0 0 chrX 10115325 10115908 -156534388 + L1Md_F2 LINE L1 6000 6582 0 2 662 192 275 88 0 chrX 10115927 10116007 -156534289 + MIRb SINE MIR 104 190 -78 2 662 495 33 0 0 chrX 10116139 10116200 -156534096 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 662 335 312 102 20 chrX 10116204 10116351 -156533945 - MIR SINE MIR -93 169 11 2 662 537 212 158 7 chrX 10116701 10116853 -156533443 - MER58A DNA MER1_type 0 224 50 2 662 400 296 90 28 chrX 10116967 10117179 -156533117 - LTR37A LTR ERV1 0 426 202 2 662 761 136 7 0 chrX 10117540 10117680 -156532616 + (TC)n Simple_repeat Simple_repeat 2 142 0 2 662 22 35 0 0 chrX 10119053 10119082 -156531214 + AT_rich Low_complexity Low_complexity 1 29 0 2 662 420 55 0 0 chrX 10119093 10119148 -156531148 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 662 1365 260 93 43 chrX 10119150 10119479 -156530817 - L1MA6 LINE L1 -44 6256 5897 2 662 4865 37 0 0 chrX 10119479 10120018 -156530278 + L1Md_T LINE L1 6044 6582 0 2 662 1365 260 93 43 chrX 10120018 10120132 -156530164 - L1MA6 LINE L1 -404 5896 5780 2 662 279 0 0 0 chrX 10120132 10120163 -156530133 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 662 1365 260 93 43 chrX 10120163 10120253 -156530043 - L1MA6 LINE L1 -521 5779 5695 2 662 624 218 15 15 chrX 10120397 10120532 -156529764 + B1F SINE Alu 5 139 -10 2 662 432 0 0 0 chrX 10120661 10120709 -156529587 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 662 1270 35 14 0 chrX 10120940 10121084 -156529212 - B1_Mm SINE Alu -1 146 1 2 662 1143 225 14 0 chrX 10121437 10121650 -156528646 + B3 SINE B2 1 216 0 2 662 350 324 17 43 chrX 10122858 10122974 -156527322 + PB1D10 SINE Alu 2 114 -3 2 662 309 326 182 10 chrX 10123337 10123535 -156526761 + L2 LINE L2 2092 2323 -1096 2 662 423 0 0 0 chrX 10123553 10123600 -156526696 + (TC)n Simple_repeat Simple_repeat 1 47 0 2 662 394 319 62 0 chrX 10124545 10124705 -156525591 - MER5B DNA MER1_type -2 176 7 2 662 270 268 11 85 chrX 10125799 10125893 -156524403 - MLT1H2 LTR MaLR -307 182 96 2 662 4432 45 0 10 chrX 10127692 10128208 -156522088 - L1Md_F2 LINE L1 0 6582 6072 2 662 369 279 57 16 chrX 10129291 10129415 -156520881 - MER33 DNA MER1_type -176 148 20 2 662 453 328 0 0 chrX 10129459 10129575 -156520721 + PB1D10 SINE Alu 2 117 0 2 662 229 379 57 7 chrX 10129575 10129600 -156520696 + B4A SINE B4 87 234 -58 2 662 211 184 41 0 chrX 10131200 10131249 -156519047 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 2 662 4302 67 2 0 chrX 10131296 10131807 -156518489 - L1_Mus1 LINE L1 -4 6563 6052 2 662 323 200 140 50 chrX 10131814 10131914 -156518382 - PB1D10 SINE Alu -4 113 5 2 662 284 311 109 16 chrX 10132519 10132712 -156517584 - L1MA4 LINE L1 -371 5929 5719 2 662 233 284 98 12 chrX 10133587 10133669 -156516627 - B2_Mm2 SINE B2 -106 89 1 2 662 381 313 42 104 chrX 10134726 10134986 -156515310 - MIRb SINE MIR 0 268 25 2 662 215 154 26 0 chrX 10135186 10135225 -156515071 + CT-rich Low_complexity Low_complexity 4 43 0 2 662 274 271 131 58 chrX 10136428 10136565 -156513731 - B1F1 SINE Alu -2 147 1 2 662 198 0 0 0 chrX 10136590 10136612 -156513684 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 2 662 860 110 14 20 chrX 10136627 10136775 -156513521 - Lx LINE L1 -6 6648 6502 2 662 978 115 83 0 chrX 10136777 10136934 -156513362 - B2_Mm2 SINE B2 -22 173 4 2 662 315 0 0 0 chrX 10137175 10137210 -156513086 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 662 425 318 15 0 chrX 10137261 10137393 -156512903 - B1F1 SINE Alu -13 136 3 2 662 414 0 0 0 chrX 10137689 10137735 -156512561 + (TC)n Simple_repeat Simple_repeat 2 47 0 2 662 351 0 0 0 chrX 10137735 10137773 -156512523 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 662 477 0 0 0 chrX 10138021 10138074 -156512222 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 662 405 0 0 0 chrX 10138074 10138118 -156512178 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 662 723 281 63 10 chrX 10138143 10138348 -156511948 - B4A SINE B4 -6 286 71 2 662 573 138 0 0 chrX 10138821 10138915 -156511381 + (GGA)n Simple_repeat Simple_repeat 2 95 0 2 662 180 0 0 0 chrX 10139059 10139079 -156511217 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 662 231 167 0 0 chrX 10139477 10139519 -156510777 + CT-rich Low_complexity Low_complexity 4 45 0 2 662 255 31 0 0 chrX 10139520 10139552 -156510744 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 662 264 122 0 0 chrX 10140468 10140509 -156509787 + (TGG)n Simple_repeat Simple_repeat 1 41 0 2 662 411 285 17 47 chrX 10141240 10141379 -156508917 + MIR3 SINE MIR 31 161 -47 2 662 201 330 96 0 chrX 10141382 10141497 -156508799 - MIR SINE MIR -1 261 136 2 662 1451 84 0 30 chrX 10141776 10141973 -156508323 - B2_Mm2 SINE B2 -4 191 1 2 662 403 322 45 19 chrX 10144296 10144451 -156505845 + MER2 DNA MER2_type 98 256 -89 2 662 549 0 0 0 chrX 10144451 10144512 -156505784 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 662 23 0 0 0 chrX 10144661 10144684 -156505612 + AT_rich Low_complexity Low_complexity 1 23 0 2 662 914 239 0 28 chrX 10144691 10144902 -156505394 - B3 SINE B2 -11 205 1 2 662 274 257 92 105 chrX 10146612 10146764 -156503532 - L3 LINE CR1 -100 4389 4240 2 662 275 356 8 8 chrX 10146783 10146902 -156503394 + Tigger16b DNA Tigger 206 324 -13 2 662 231 304 76 69 chrX 10147205 10147350 -156502946 + MIR SINE MIR 2 147 -115 2 662 207 0 0 0 chrX 10147641 10147664 -156502632 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 662 222 37 0 0 chrX 10148451 10148478 -156501818 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2 662 1001 123 35 47 chrX 10148852 10149023 -156501273 - B2_Mm2 SINE B2 -26 169 1 2 662 5794 122 22 2 chrX 10149281 10150108 -156500188 + Lx LINE L1 5804 6646 -8 2 662 254 343 30 0 chrX 10150120 10150254 -156500042 - L2 LINE L2 -528 2891 2754 2 662 188 122 0 24 chrX 10150347 10150389 -156499907 + (TTTTG)n Simple_repeat Simple_repeat 3 43 0 2 662 243 88 0 0 chrX 10150809 10150843 -156499453 + (TTG)n Simple_repeat Simple_repeat 2 35 0 2 662 961 212 86 18 chrX 10152460 10152681 -156497615 - Lx7 LINE L1 -7 7689 7454 2 662 207 348 0 0 chrX 10152693 10152762 -156497534 - MIRc SINE MIR -118 150 82 2 662 222 325 77 13 chrX 10154041 10154119 -156496177 - ID4_ SINE ID 0 83 1 2 662 264 137 0 0 chrX 10154295 10154346 -156495950 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 2 662 225 254 0 0 chrX 10154350 10154421 -156495875 + (TG)n Simple_repeat Simple_repeat 1 71 0 2 662 339 25 0 0 chrX 10155030 10155070 -156495226 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 662 2024 162 40 40 chrX 10156014 10156388 -156493908 + ORR1D1 LTR MaLR 1 374 0 2 662 339 25 0 0 chrX 10156721 10156761 -156493535 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 662 210 71 0 0 chrX 10158299 10158327 -156491969 + (A)n Simple_repeat Simple_repeat 1 28 0 2 662 192 40 0 0 chrX 10158991 10159016 -156491280 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 2 662 702 277 22 28 chrX 10159049 10159231 -156491065 - B3A SINE B2 -16 182 2 2 662 700 344 50 19 chrX 10160310 10160627 -156489669 + LTR87 LTR ERVL? 298 624 0 2 662 449 276 63 79 chrX 10161916 10162105 -156488191 - MER58A DNA MER1_type -1 223 38 2 662 351 245 1 17 chrX 10162404 10162528 -156487768 - B1_Mur4 SINE Alu -2 115 1 2 662 243 325 56 56 chrX 10163928 10164054 -156486242 + MIR SINE MIR 52 182 -80 2 662 958 142 101 0 chrX 10164054 10164223 -156486073 + B2_Mm2 SINE B2 1 186 -9 2 662 243 325 56 56 chrX 10164223 10164275 -156486021 + MIR SINE MIR 183 229 -33 2 662 1251 50 0 0 chrX 10164306 10164446 -156485850 + B1_Mus1 SINE Alu 2 141 -7 2 662 180 0 0 0 chrX 10164446 10164466 -156485830 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 662 600 222 46 46 chrX 10164543 10164694 -156485602 + B3A SINE B2 1 151 -47 2 662 240 100 0 0 chrX 10164705 10164745 -156485551 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 662 312 206 32 0 chrX 10165572 10165635 -156484661 - MER5A1 DNA MER1_type -5 161 97 2 662 21 0 0 0 chrX 10165637 10165658 -156484638 + AT_rich Low_complexity Low_complexity 1 21 0 2 662 259 217 33 0 chrX 10165887 10165947 -156484349 + ID SINE ID 1 62 -162 2 662 22 35 0 0 chrX 10166719 10166748 -156483548 + AT_rich Low_complexity Low_complexity 1 29 0 2 662 219 167 0 0 chrX 10166849 10166891 -156483405 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 662 41 48 0 0 chrX 10167036 10167098 -156483198 + AT_rich Low_complexity Low_complexity 1 62 0 2 662 426 108 0 0 chrX 10167162 10167236 -156483060 + (TTGG)n Simple_repeat Simple_repeat 2 75 0 2 662 369 43 0 0 chrX 10167711 10167758 -156482538 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 662 405 0 0 0 chrX 10168639 10168684 -156481612 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 662 306 0 0 0 chrX 10168980 10169014 -156481282 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 662 217 360 0 11 chrX 10169339 10169429 -156480867 + CT-rich Low_complexity Low_complexity 2 90 0 3 662 1142 93 25 0 chrX 10169855 10170017 -156480279 + L1_Mus1 LINE L1 6401 6566 -1 3 662 222 279 29 0 chrX 10170074 10170142 -156480154 + CT-rich Low_complexity Low_complexity 3 72 0 3 662 180 0 0 0 chrX 10170550 10170570 -156479726 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 3 662 335 301 52 22 chrX 10171016 10171152 -156479144 - MER5A DNA MER1_type -42 147 8 3 662 1358 73 10 20 chrX 10171190 10171387 -156478909 - B2_Mm2 SINE B2 0 195 1 3 662 227 135 0 0 chrX 10174263 10174300 -156475996 - 4.5SRNA scRNA scRNA -57 37 1 3 662 316 314 49 64 chrX 10174868 10175193 -156475103 - L1ME2 LINE L1 -113 6051 5661 3 662 414 276 118 43 chrX 10175208 10175530 -156474766 - L1ME2 LINE L1 -565 5608 5263 3 662 2015 54 0 19 chrX 10175667 10175950 -156474346 - L1Md_F2 LINE L1 0 6582 6322 3 662 180 150 0 0 chrX 10175950 10175972 -156474324 + (T)n Simple_repeat Simple_repeat 1 22 0 3 662 405 346 136 34 chrX 10176130 10176745 -156473551 - L1ME2 LINE L1 -3388 2758 2073 3 662 624 248 8 0 chrX 10177097 10177222 -156473074 + B3A SINE B2 25 150 -48 3 662 375 258 124 8 chrX 10177235 10177356 -156472940 + B3A SINE B2 2 136 -62 3 662 342 0 0 0 chrX 10177358 10177396 -156472900 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 662 408 40 0 0 chrX 10177847 10177897 -156472399 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 3 662 330 355 118 32 chrX 10178503 10178724 -156471572 - MLT1F2 LTR MaLR -13 547 308 3 662 195 349 93 17 chrX 10179610 10179782 -156470514 + L2 LINE L2 2215 2399 -1020 3 662 245 340 24 31 chrX 10179935 10180032 -156470264 - L2b LINE L2 -27 3399 3242 3 662 561 210 37 56 chrX 10180041 10180217 -156470079 + B3 SINE B2 28 195 0 3 662 395 248 103 28 chrX 10180798 10180943 -156469353 + MER5A1 DNA MER1_type 5 160 -6 3 662 334 265 122 0 chrX 10180979 10181077 -156469219 - MER5B DNA MER1_type -63 115 6 3 662 565 227 40 60 chrX 10182392 10182542 -156467754 + B3A SINE B2 1 147 -51 3 662 390 21 0 0 chrX 10182546 10182593 -156467703 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 662 26 74 0 0 chrX 10182601 10182655 -156467641 + AT_rich Low_complexity Low_complexity 1 54 0 3 662 941 310 47 25 chrX 10182986 10183261 -156467035 + B4A SINE B4 12 292 0 3 662 557 268 102 4 chrX 10184424 10184679 -156465617 + L1ME3 LINE L1 5672 5951 -211 3 662 1487 266 87 18 chrX 10184725 10185349 -156464947 + L1MA9 LINE L1 5602 6268 -44 3 662 21 0 0 0 chrX 10186141 10186162 -156464134 + AT_rich Low_complexity Low_complexity 1 21 0 3 662 803 94 17 0 chrX 10186248 10186365 -156463931 - ORR1B1 LTR MaLR -2 392 274 3 662 564 315 19 0 chrX 10186367 10186529 -156463767 - Lx5 LINE L1 -32 7018 6854 3 662 4045 214 42 7 chrX 10186529 10187395 -156462901 + Lx5 LINE L1 5821 6716 -334 3 662 1189 297 124 19 chrX 10187406 10188147 -156462149 + L1MEc LINE L1 158 976 -5424 3 662 242 289 46 58 chrX 10188154 10188415 -156461881 + L1MEc LINE L1 1337 1594 -4806 3 662 336 281 141 34 chrX 10188425 10188602 -156461694 + L1MEc LINE L1 2093 2288 -4112 3 662 1281 84 39 11 chrX 10189328 10189508 -156460788 - B2_Mm2 SINE B2 -9 186 2 3 662 339 65 0 0 chrX 10189607 10189653 -156460643 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 662 278 271 66 66 chrX 10189653 10189819 -156460477 + L1MEc LINE L1 4690 4855 -1464 3 662 397 239 85 38 chrX 10190547 10190788 -156459508 + L1ME1 LINE L1 5185 5438 -740 3 662 411 326 87 41 chrX 10190917 10191307 -156458989 + L1ME1 LINE L1 5746 6153 -26 3 662 755 270 103 50 chrX 10191304 10191768 -156458528 + L1MB7 LINE L1 5639 6127 -57 3 662 600 80 0 10 chrX 10191893 10192040 -156458256 + L1_Mus3 LINE L1 6537 6638 0 3 662 1912 150 13 99 chrX 10192280 10192673 -156457623 - ORR1B2 LTR MaLR 0 367 9 3 662 556 255 132 30 chrX 10192887 10193289 -156457007 - L1MB2 LINE L1 -64 6107 5629 3 662 263 290 0 48 chrX 10193319 10193424 -156456872 - MIR SINE MIR -50 212 113 3 662 274 159 0 0 chrX 10193468 10193512 -156456784 - U2 snRNA snRNA -144 44 1 3 662 189 0 0 0 chrX 10194316 10194337 -156455959 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 3 662 571 316 98 77 chrX 10194597 10194882 -156455414 + B4A SINE B4 2 292 0 3 662 302 321 0 18 chrX 10194882 10194993 -156455303 + (CA)n Simple_repeat Simple_repeat 1 109 0 3 662 3573 317 43 35 chrX 10195470 10197605 -156452691 + Lx8 LINE L1 5462 7463 -10 3 662 1127 259 72 28 chrX 10197993 10198311 -156451985 - MTEa LTR MaLR 0 379 48 3 662 429 20 0 0 chrX 10198341 10198391 -156451905 + (TAAG)n Simple_repeat Simple_repeat 1 50 0 3 662 260 323 76 35 chrX 10200273 10200632 -156449664 + L1M4 LINE L1 5279 5656 -468 3 662 870 208 22 17 chrX 10201839 10202020 -156448276 + B3A SINE B2 1 182 -16 3 662 2458 126 39 24 chrX 10202235 10202650 -156447646 - MTC LTR MaLR 0 421 1 3 662 237 365 0 23 chrX 10203942 10204029 -156446267 + MLT1A LTR MaLR 75 159 -215 3 662 355 308 34 51 chrX 10204251 10204402 -156445894 + L1MC LINE L1 5341 5488 -2394 3 662 2171 148 2 78 chrX 10204402 10204471 -156445825 - ORR1B2 LTR MaLR 0 367 325 3 662 1288 84 5 50 chrX 10204471 10204672 -156445624 - B2_Mm1t SINE B2 0 193 2 3 662 2171 148 2 78 chrX 10204672 10204999 -156445297 - ORR1B2 LTR MaLR -43 324 1 3 662 355 308 34 51 chrX 10204999 10205083 -156445213 + L1MC LINE L1 5489 5572 -2310 3 662 2378 29 0 0 chrX 10205126 10205403 -156444893 + L1Md_A LINE L1 6302 6578 -4 3 662 180 0 0 0 chrX 10205438 10205458 -156444838 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 3 662 754 295 0 25 chrX 10205578 10205776 -156444520 + B3A SINE B2 6 198 0 3 662 404 82 16 0 chrX 10206769 10206830 -156443466 + (TCTCCC)n Simple_repeat Simple_repeat 4 65 0 3 662 607 132 54 9 chrX 10206832 10207053 -156443243 + CT-rich Low_complexity Low_complexity 1 231 0 3 662 352 268 0 24 chrX 10207574 10207658 -156442638 - ID4 SINE ID 0 83 2 3 662 252 0 0 0 chrX 10208009 10208037 -156442259 + (TC)n Simple_repeat Simple_repeat 2 29 0 3 662 549 30 0 0 chrX 10208037 10208103 -156442193 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 662 588 276 0 109 chrX 10208121 10208296 -156442000 - B3A SINE B2 -42 156 1 3 662 261 135 0 0 chrX 10208380 10208432 -156441864 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 662 349 20 40 0 chrX 10208432 10208482 -156441814 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 662 259 310 0 0 chrX 10208527 10208598 -156441698 + GA-rich Low_complexity Low_complexity 1 71 0 3 662 239 409 34 0 chrX 10208914 10209063 -156441233 + MLT1F1 LTR MaLR 330 483 -86 3 662 16880 62 1 1 chrX 10209325 10212274 -156438022 - L1Md_F2 LINE L1 -14 6568 3622 3 662 298 326 88 32 chrX 10212282 10212567 -156437729 + L1M5 LINE L1 5504 5804 -320 3 662 228 283 97 19 chrX 10212947 10213102 -156437194 + L1MEg LINE L1 1090 1256 -4986 3 662 411 383 76 10 chrX 10213861 10214270 -156436026 + L1MEg LINE L1 2232 2667 -3479 3 662 257 292 0 0 chrX 10215546 10215618 -156434678 + (TAGA)n Simple_repeat Simple_repeat 1 72 0 3 662 240 215 77 0 chrX 10215671 10215736 -156434560 + Tigger14a DNA MER2_type 82 151 -173 3 662 250 365 44 6 chrX 10215839 10215999 -156434297 - MIRb SINE MIR -28 240 75 3 662 1102 83 0 7 chrX 10216247 10216385 -156433911 + B1_Mm SINE Alu 1 138 -9 3 662 779 31 0 10 chrX 10216385 10216484 -156433812 + (GGAAA)n Simple_repeat Simple_repeat 3 100 0 3 662 441 320 39 13 chrX 10216655 10216810 -156433486 + RSINE1 SINE B4 3 161 -4 3 662 234 0 0 0 chrX 10216962 10216988 -156433308 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 662 232 322 0 0 chrX 10218390 10218477 -156431819 + GA-rich Low_complexity Low_complexity 1 87 0 3 662 2146 116 3 97 chrX 10218565 10218947 -156431349 + ORR1B1 LTR MaLR 41 386 -8 3 662 23 0 0 0 chrX 10218978 10219001 -156431295 + AT_rich Low_complexity Low_complexity 1 23 0 3 662 428 368 93 12 chrX 10219240 10219399 -156430897 - Lx8 LINE L1 -274 7199 7032 3 662 812 199 0 0 chrX 10219399 10219540 -156430756 + B1_Mus1 SINE Alu 2 142 -6 3 662 195 42 0 0 chrX 10219542 10219566 -156430730 + (CAAAA)n Simple_repeat Simple_repeat 5 28 0 3 662 428 368 93 12 chrX 10219566 10219832 -156430464 - Lx8 LINE L1 -442 7031 6739 3 662 643 252 89 13 chrX 10219873 10220030 -156430266 - MER45A DNA Tip100 -2 176 8 3 662 641 309 95 49 chrX 10220158 10220490 -156429806 - MLT1A0 LTR MaLR -10 380 1 3 662 655 264 100 118 chrX 10221674 10222005 -156428291 + MER44A DNA MER2_type 8 332 -7 3 662 1815 127 30 3 chrX 10222162 10222463 -156427833 + RMER4B LTR ERVK 1 309 -276 3 662 579 265 124 49 chrX 10222732 10222998 -156427298 + MLT1L LTR MaLR 312 597 -13 3 662 492 18 0 0 chrX 10223153 10223210 -156427086 + (TC)n Simple_repeat Simple_repeat 2 58 0 3 662 1007 99 75 0 chrX 10223212 10223373 -156426923 - B2_Mm2 SINE B2 -22 173 1 3 82 806 266 33 33 chrX 10223595 10223809 -156426487 - B3 SINE B2 -2 214 1 3 663 997 134 0 0 chrX 10225453 10225595 -156424701 - B1_Mur3 SINE Alu -3 146 5 3 663 1150 252 52 31 chrX 10225808 10226230 -156424066 + L1MB8 LINE L1 5742 6172 -6 3 663 452 220 0 21 chrX 10226230 10226323 -156423973 - Arthur1A DNA Tip100 -86 91 1 3 663 544 310 106 5 chrX 10226323 10226514 -156423782 - LTR33A LTR ERVL -302 218 8 3 663 529 263 108 35 chrX 10226948 10227208 -156423088 + MER97c DNA MER1_type? 803 1081 -9 3 663 366 350 7 7 chrX 10227429 10227573 -156422723 - MIRb SINE MIR -106 162 19 3 663 477 189 0 0 chrX 10227688 10227783 -156422513 + (TG)n Simple_repeat Simple_repeat 2 96 0 3 663 242 302 90 40 chrX 10227853 10227953 -156422343 - PB1D9 SINE Alu -4 116 12 3 663 588 130 0 0 chrX 10228727 10228842 -156421454 + (GA)n Simple_repeat Simple_repeat 1 115 0 3 663 234 0 0 0 chrX 10229062 10229088 -156421208 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 663 1766 263 16 7 chrX 10229362 10229802 -156420494 - RCHARR1 DNA MER1_type -457 517 74 4 663 393 303 31 31 chrX 10229804 10229964 -156420332 + MER5A DNA MER1_type 29 188 -1 4 663 875 277 41 0 chrX 10231207 10231402 -156418894 + B3 SINE B2 2 204 -12 4 663 7533 220 39 72 chrX 10231591 10231960 -156418336 - Lx7 LINE L1 0 7696 7367 4 663 513 0 0 0 chrX 10231960 10232017 -156418279 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 663 11656 187 55 47 chrX 10232017 10234776 -156415520 - Lx7 LINE L1 -330 7366 4623 4 663 192 77 0 0 chrX 10234776 10234802 -156415494 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 663 11656 146 74 17 chrX 10234802 10235935 -156414361 - Lx7 LINE L1 -1258 4622 3376 4 663 644 209 43 19 chrX 10235913 10236074 -156414222 - Lx7 LINE L1 -3626 2254 2090 4 663 3630 182 55 55 chrX 10236076 10237218 -156413078 - Lx7 LINE L1 -4434 1446 307 4 663 187 410 12 0 chrX 10237487 10237570 -156412726 + L2c LINE L2 3266 3349 -38 4 663 297 0 0 0 chrX 10240044 10240077 -156410219 + (A)n Simple_repeat Simple_repeat 1 33 0 4 663 524 140 11 0 chrX 10240526 10240619 -156409677 + CT-rich Low_complexity Low_complexity 2 95 0 4 663 4657 76 24 9 chrX 10240698 10241333 -156408963 - L1Md_F2 LINE L1 -9 6573 5930 4 663 1046 138 153 0 chrX 10241415 10241611 -156408685 + URR1A DNA MER1_type 1 226 0 4 663 424 292 179 5 chrX 10241986 10242182 -156408114 - LTR16C LTR ERVL -9 480 251 4 663 3335 31 13 0 chrX 10242321 10242712 -156407584 + MTA_Mm LTR MaLR 1 396 0 4 663 228 67 0 0 chrX 10244152 10244182 -156406114 + (CCA)n Simple_repeat Simple_repeat 1 30 0 4 663 328 299 59 118 chrX 10244182 10244195 -156406101 + B4 SINE B4 70 112 -180 4 663 771 190 22 0 chrX 10244195 10244332 -156405964 + B1_Mur2 SINE Alu 1 140 -9 4 663 328 299 59 118 chrX 10244332 10244368 -156405928 + B4 SINE B4 113 244 -48 4 663 513 0 0 0 chrX 10244806 10244863 -156405433 + (TC)n Simple_repeat Simple_repeat 1 57 0 4 663 378 0 0 0 chrX 10244863 10244904 -156405392 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 663 1153 68 7 0 chrX 10244940 10245086 -156405210 + B1_Mus2 SINE Alu 1 147 0 4 663 1276 111 11 0 chrX 10245504 10245693 -156404603 + B2_Mm1t SINE B2 2 192 -1 4 663 7465 73 1 4 chrX 10246419 10247965 -156402331 + L1_Mus1 LINE L1 5029 6567 0 4 663 22 56 0 0 chrX 10248231 10248267 -156402029 + AT_rich Low_complexity Low_complexity 1 36 0 4 663 417 198 0 0 chrX 10248358 10248444 -156401852 + (TA)n Simple_repeat Simple_repeat 2 87 0 4 663 25 51 0 0 chrX 10248593 10248632 -156401664 + AT_rich Low_complexity Low_complexity 1 39 0 4 663 36 53 0 0 chrX 10248683 10248740 -156401556 + AT_rich Low_complexity Low_complexity 1 57 0 4 663 21 0 0 0 chrX 10249212 10249233 -156401063 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 362 247 215 89 chrX 10251086 10251481 -156398815 - L1ME3B LINE L1 -122 6118 5674 4 663 238 286 32 0 chrX 10251572 10251635 -156398661 + MTEa LTR MaLR 1 65 -314 4 663 288 206 31 16 chrX 10251631 10251695 -156398601 + B3A SINE B2 5 69 -129 4 663 216 163 0 0 chrX 10251728 10251771 -156398525 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 663 283 96 0 37 chrX 10251913 10251967 -156398329 + (AGGGGG)n Simple_repeat Simple_repeat 6 57 0 4 663 499 227 305 0 chrX 10251967 10252121 -156398175 + MTEa LTR MaLR 171 371 -8 4 663 22 0 0 0 chrX 10255281 10255303 -156394993 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 535 264 9 9 chrX 10256019 10256126 -156394170 - RSINE1 SINE B4 -57 108 2 4 663 267 336 52 17 chrX 10256256 10256371 -156393925 - PB1D9 SINE Alu 0 120 2 4 663 650 275 87 0 chrX 10256549 10256698 -156393598 + RSINE1 SINE B4 3 164 -1 4 663 3759 171 102 55 chrX 10257111 10257961 -156392335 + RMER19B LTR ERVK 1 890 -12 4 663 180 0 0 0 chrX 10258034 10258054 -156392242 + (CCCCCA)n Simple_repeat Simple_repeat 5 24 0 4 663 3210 53 2 2 chrX 10258558 10258954 -156391342 + MTA_Mm LTR MaLR 1 396 0 4 663 5902 65 177 73 chrX 10258954 10259949 -156390347 + MTA_Mm-int LTR MaLR 1 1098 0 4 663 1026 108 25 0 chrX 10259949 10260106 -156390190 + MTA_Mm LTR MaLR 1 161 -246 4 663 831 163 250 0 chrX 10260613 10260785 -156389511 + B3 SINE B2 2 216 0 4 663 229 176 68 0 chrX 10260886 10260960 -156389336 + (TATAA)n Simple_repeat Simple_repeat 2 80 0 4 663 722 250 26 95 chrX 10261162 10261352 -156388944 + B3 SINE B2 1 177 -18 4 663 205 362 14 0 chrX 10261352 10261421 -156388875 + (CA)n Simple_repeat Simple_repeat 2 71 0 4 663 416 19 0 19 chrX 10262091 10262145 -156388151 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 663 911 180 13 34 chrX 10262317 10262521 -156387775 - B3 SINE B2 -2 193 2 4 663 342 314 16 25 chrX 10262525 10262646 -156387650 + MIRb SINE MIR 132 251 -17 4 663 635 306 86 18 chrX 10262823 10263209 -156387087 - L1MA9 LINE L1 -286 6026 5615 4 663 1026 238 61 4 chrX 10263209 10263450 -156386846 - MTD LTR MaLR 0 419 165 4 663 2032 196 5 29 chrX 10263450 10263833 -156386463 + ORR1D1 LTR MaLR 1 374 0 4 663 594 220 19 90 chrX 10263841 10263996 -156386300 - MTD LTR MaLR -258 161 18 4 663 688 255 95 0 chrX 10264002 10264245 -156386051 - L1MA9 LINE L1 -692 5620 5355 4 663 913 233 89 55 chrX 10264325 10264707 -156385589 + L1M2 LINE L1 3937 4331 -1812 4 663 819 286 39 0 chrX 10264708 10265040 -156385256 + L1M2 LINE L1 4906 5250 -890 4 663 829 241 5 47 chrX 10265050 10265242 -156385054 + B3A SINE B2 1 184 -14 4 663 2036 166 32 26 chrX 10265355 10265732 -156384564 - MTC LTR MaLR -2 419 41 4 663 1236 95 62 0 chrX 10265822 10266001 -156384295 - B2_Mm2 SINE B2 -5 190 1 4 663 1148 266 55 45 chrX 10266018 10266439 -156383857 - Lx8 LINE L1 -73 7400 6976 4 663 263 287 43 0 chrX 10266448 10266542 -156383754 - L1M4 LINE L1 -395 5769 5672 4 663 558 244 131 25 chrX 10266568 10266812 -156383484 - L1M4 LINE L1 -847 5597 5328 4 663 989 180 89 11 chrX 10266844 10267125 -156383171 - L1MA8 LINE L1 -23 6268 5966 4 663 329 246 85 27 chrX 10267122 10267310 -156382986 - L1M4 LINE L1 -803 5343 5145 4 663 854 216 29 23 chrX 10267314 10267489 -156382807 - 7SLRNA srpRNA srpRNA -138 176 1 4 663 486 316 112 43 chrX 10267531 10267905 -156382391 - L1M4 LINE L1 -1071 5075 4676 4 663 1114 179 8 47 chrX 10267910 10268145 -156382151 - URR1A DNA MER1_type 0 226 1 4 663 792 32 0 0 chrX 10268398 10268493 -156381803 + (TA)n Simple_repeat Simple_repeat 2 96 0 4 663 1092 211 10 15 chrX 10268853 10269055 -156381241 + B3 SINE B2 8 208 -8 4 663 916 242 0 0 chrX 10269197 10269375 -156380921 + Lx8 LINE L1 6191 6368 -1105 4 663 1713 168 140 0 chrX 10269375 10269508 -156380788 + ORR1C1 LTR MaLR 3 158 -220 4 663 726 81 0 0 chrX 10269508 10269619 -156380677 + (TC)n Simple_repeat Simple_repeat 1 111 0 4 663 1713 168 140 0 chrX 10269619 10269813 -156380483 + ORR1C1 LTR MaLR 159 375 -3 4 663 1171 298 9 0 chrX 10269839 10270171 -156380125 + Lx8 LINE L1 6384 6718 -755 4 663 1270 285 24 26 chrX 10270175 10270593 -156379703 + Lx5 LINE L1 6618 7034 -16 4 663 495 301 120 0 chrX 10270623 10270806 -156379490 + B3 SINE B2 1 205 -11 4 663 1685 267 119 54 chrX 10270821 10271265 -156379031 + Lx8 LINE L1 6702 7183 -290 4 663 3172 95 7 0 chrX 10271265 10271698 -156378598 - RLTR10C LTR ERVK 0 436 1 4 663 1685 267 119 54 chrX 10271698 10271899 -156378397 + Lx8 LINE L1 7184 7389 -84 4 663 358 298 10 0 chrX 10272084 10272188 -156378108 + MLT1C LTR MaLR 53 157 -310 4 663 546 342 96 36 chrX 10272201 10272450 -156377846 + MLT1C LTR MaLR 196 459 -8 4 663 919 155 7 20 chrX 10272721 10272872 -156377424 - B1_Mur3 SINE Alu 0 149 1 4 663 1207 54 0 0 chrX 10273328 10273475 -156376821 - B1_Mm SINE Alu 0 147 1 4 663 315 0 0 0 chrX 10274568 10274603 -156375693 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 663 706 88 0 0 chrX 10274603 10274687 -156375609 - B1_Mm SINE Alu -3 144 61 4 663 246 320 64 39 chrX 10274687 10274843 -156375453 - MLT1J LTR MaLR -3 509 350 4 663 815 209 0 25 chrX 10275129 10275286 -156375010 - RSINE1 SINE B4 -2 163 11 4 663 444 294 35 15 chrX 10275576 10275776 -156374520 + L1MC1 LINE L1 6129 6332 -1 4 663 828 181 7 0 chrX 10275788 10275932 -156374364 + B1_Mus1 SINE Alu 3 147 -1 4 663 356 308 41 77 chrX 10275789 10275958 -156374338 + B4A SINE B4 88 250 -42 4 663 310 167 66 16 chrX 10276120 10276181 -156374115 + B1_Mm SINE Alu 63 126 -21 4 663 682 257 92 5 chrX 10276203 10276387 -156373909 + B3 SINE B2 2 201 -15 4 663 932 37 30 30 chrX 10276396 10276563 -156373733 + (GAGAA)n Simple_repeat Simple_repeat 5 171 0 4 663 540 0 0 0 chrX 10276949 10277009 -156373287 + (TAAAA)n Simple_repeat Simple_repeat 5 64 0 4 663 189 0 0 0 chrX 10277181 10277202 -156373094 + (TAAAAA)n Simple_repeat Simple_repeat 3 23 0 4 663 367 225 0 0 chrX 10277213 10277284 -156373012 + B1_Mur3 SINE Alu 1 71 -78 4 663 226 189 26 26 chrX 10277284 10277360 -156372936 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 4 663 21 36 0 0 chrX 10277464 10277492 -156372804 + AT_rich Low_complexity Low_complexity 1 28 0 4 663 286 295 88 54 chrX 10277633 10277780 -156372516 + MLT1A0 LTR MaLR 1 152 -213 4 663 2780 44 0 3 chrX 10277987 10278327 -156371969 + L1_Mus1 LINE L1 6227 6565 -2 4 663 21 0 0 0 chrX 10278328 10278349 -156371947 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 1219 118 0 46 chrX 10278533 10278729 -156371567 + B2_Mm2 SINE B2 1 187 -8 4 663 1153 302 57 65 chrX 10278811 10279353 -156370943 - MER44B DNA MER2_type -9 541 4 4 663 1484 27 43 5 chrX 10279733 10279918 -156370378 + B2_Mm1a SINE B2 2 193 0 4 663 562 330 132 29 chrX 10280171 10280452 -156369844 - LTR50 LTR ERVL -159 636 327 4 663 953 45 98 0 chrX 10280537 10280670 -156369626 + B1_Mus1 SINE Alu 2 147 -1 4 663 286 123 17 17 chrX 10280785 10280843 -156369453 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 663 262 311 8 8 chrX 10280985 10281108 -156369188 + L1M5 LINE L1 3810 3932 -2214 4 663 1114 118 12 6 chrX 10281193 10281363 -156368933 + URR1A DNA MER1_type 56 226 0 4 663 220 325 92 7 chrX 10281383 10281535 -156368761 - L2a LINE L2 -115 3311 3147 4 663 292 209 91 45 chrX 10281543 10281653 -156368643 + PB1D9 SINE Alu 5 119 -1 4 663 207 319 0 0 chrX 10281675 10281747 -156368549 + GA-rich Low_complexity Low_complexity 3 74 0 4 663 306 256 81 134 chrX 10281875 10281891 -156368405 - B4 SINE B4 -53 239 225 4 663 276 30 0 0 chrX 10281891 10281924 -156368372 + (CCTG)n Simple_repeat Simple_repeat 2 34 0 4 663 750 204 15 0 chrX 10281931 10282063 -156368233 - B1_Mur2 SINE Alu -7 142 9 4 663 510 229 80 48 chrX 10282063 10282077 -156368219 - ID_B1 SINE B4 -68 180 67 4 663 192 48 0 67 chrX 10282085 10282130 -156368166 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 5 663 266 360 0 0 chrX 10282132 10282207 -156368089 - ID_B1 SINE B4 -54 170 96 5 663 1119 62 7 7 chrX 10282588 10282735 -156367561 + B1_Mus2 SINE Alu 1 147 0 5 663 6041 44 0 5 chrX 10283187 10283921 -156366375 - L1Md_F2 LINE L1 -12 6570 5841 5 663 288 304 80 103 chrX 10283926 10284139 -156366157 + L2a LINE L2 2934 3141 -285 5 663 353 267 48 0 chrX 10284224 10284329 -156365967 + Lx7 LINE L1 7221 7330 -366 5 663 25 65 0 0 chrX 10284494 10284540 -156365756 + AT_rich Low_complexity Low_complexity 1 46 0 5 663 187 164 0 52 chrX 10284601 10284659 -156365637 + GA-rich Low_complexity Low_complexity 1 55 0 5 663 475 250 34 8 chrX 10284663 10284780 -156365516 + ORR1E LTR MaLR 4 123 -236 5 663 1686 180 94 26 chrX 10285051 10285393 -156364903 - ORR1C1 LTR MaLR -13 365 1 5 663 669 194 119 40 chrX 10285776 10285953 -156364343 + B2_Mm2 SINE B2 1 191 -4 5 663 1155 48 14 0 chrX 10285958 10286103 -156364193 + B1_Mus2 SINE Alu 1 147 0 5 663 1283 78 34 0 chrX 10286132 10286311 -156363985 + B2_Mm1t SINE B2 2 186 -7 5 663 269 26 26 0 chrX 10286409 10286447 -156363849 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 5 663 214 326 0 32 chrX 10286524 10286619 -156363677 + GA-rich Low_complexity Low_complexity 4 95 0 5 663 214 417 0 0 chrX 10288098 10288170 -156362126 - ID4_ SINE ID 0 83 12 5 663 548 101 275 0 chrX 10288171 10288280 -156362016 + B1_Mus1 SINE Alu 2 140 -8 5 663 334 207 75 45 chrX 10288281 10288422 -156361874 - RMER16 LTR ERVK -256 277 3 5 663 231 289 33 0 chrX 10288427 10288517 -156361779 - L1ME3A LINE L1 -21 6152 6060 5 663 277 203 31 15 chrX 10288573 10288638 -156361658 - B1_Mur1 SINE Alu -8 141 76 5 663 249 33 0 0 chrX 10289211 10289241 -156361055 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 5 663 207 0 0 0 chrX 10289274 10289297 -156360999 + (TTTTTG)n Simple_repeat Simple_repeat 1 23 0 5 663 375 171 144 23 chrX 10289389 10289521 -156360775 - Lx9 LINE L1 -1 7643 7496 5 663 1171 43 0 0 chrX 10289680 10289818 -156360478 + B1_Mm SINE Alu 1 138 -9 5 663 467 18 60 87 chrX 10289818 10290003 -156360293 + (TA)n Simple_repeat Simple_repeat 1 180 0 5 663 860 227 0 7 chrX 10290059 10290210 -156360086 - B3A SINE B2 -48 150 1 5 663 486 343 108 29 chrX 10290351 10290732 -156359564 + L3 LINE CR1 3413 3823 -666 5 663 227 333 35 12 chrX 10291137 10291222 -156359074 + L3 LINE CR1 4370 4456 -33 5 663 432 0 0 0 chrX 10293229 10293277 -156357019 + (CATA)n Simple_repeat Simple_repeat 1 48 0 5 663 180 0 0 0 chrX 10293453 10293473 -156356823 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 5 663 203 152 43 21 chrX 10294464 10294511 -156355785 + (CCCTG)n Simple_repeat Simple_repeat 3 50 0 5 663 31 0 0 0 chrX 10298344 10298375 -156351921 + AT_rich Low_complexity Low_complexity 1 31 0 5 663 1277 61 0 0 chrX 10298738 10298902 -156351394 + L1_Mus1 LINE L1 6403 6566 -1 5 663 1142 76 0 0 chrX 10299103 10299248 -156351048 - B1_Mus1 SINE Alu -2 146 2 5 663 1311 230 84 0 chrX 10299768 10300137 -156350159 - Lx9 LINE L1 -7 7637 7238 5 663 390 365 107 6 chrX 10300191 10300359 -156349937 + MER115 DNA Tip100 32 216 -477 5 663 383 177 105 34 chrX 10301162 10301279 -156349017 - B1_Mm SINE Alu 0 148 1 5 663 325 70 35 0 chrX 10301288 10301345 -156348951 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 5 663 360 321 14 36 chrX 10301510 10301649 -156348647 - ID_B1 SINE B4 -3 221 86 5 663 546 16 0 0 chrX 10302307 10302370 -156347926 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 663 231 36 0 0 chrX 10302637 10302665 -156347631 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 663 396 103 0 0 chrX 10302710 10302768 -156347528 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 5 663 480 307 26 85 chrX 10302768 10302921 -156347375 - B4A SINE B4 -46 246 103 5 663 1187 264 112 45 chrX 10302949 10303427 -156346869 + MLT1G1 LTR MaLR 20 579 0 5 663 1153 57 0 0 chrX 10303797 10303937 -156346359 + B1_Mus2 SINE Alu 1 140 -7 5 663 267 322 88 65 chrX 10303996 10304289 -156346007 + MLT1C LTR MaLR 123 410 -57 5 663 212 0 0 35 chrX 10304290 10304319 -156345977 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 5 663 903 131 0 0 chrX 10304356 10304486 -156345810 - B3 SINE B2 -86 130 1 5 663 440 269 54 98 chrX 10304798 10304977 -156345319 - L1ME3 LINE L1 -14 6148 5975 5 663 1214 48 0 0 chrX 10304977 10305123 -156345173 - B1_Mm SINE Alu 0 147 2 5 663 440 269 54 98 chrX 10305123 10305219 -156345077 - L1ME3 LINE L1 -188 5974 5885 5 663 1090 88 0 7 chrX 10305317 10305465 -156344831 + B1_Mus2 SINE Alu 1 147 0 5 663 361 270 56 0 chrX 10305489 10305578 -156344718 - RSINE1 SINE B4 -62 103 10 5 663 425 238 54 3 chrX 10305717 10305868 -156344428 - L1ME3 LINE L1 -500 5668 5511 5 663 1919 139 23 110 chrX 10305928 10306364 -156343932 + RMER10B LTR ERVL 1 398 0 5 663 192 316 76 76 chrX 10306494 10306638 -156343658 + MIR3 SINE MIR 3 146 -62 5 663 186 103 0 0 chrX 10306724 10306753 -156343543 + (C)n Simple_repeat Simple_repeat 1 29 0 5 663 531 82 0 0 chrX 10306907 10306980 -156343316 + (TTCC)n Simple_repeat Simple_repeat 1 73 0 5 663 207 345 152 18 chrX 10307143 10307255 -156343041 - L2b LINE L2 -5 3370 3244 5 663 203 217 0 21 chrX 10307473 10307487 -156342809 + G-rich Low_complexity Low_complexity 5 18 0 5 663 445 242 145 0 chrX 10307487 10307611 -156342685 + B1_Mur2 SINE Alu 1 142 -7 5 663 203 217 0 21 chrX 10307611 10307643 -156342653 + G-rich Low_complexity Low_complexity 19 49 0 5 663 308 286 247 10 chrX 10308170 10308364 -156341932 + L1MC4 LINE L1 7422 7661 -381 5 663 906 162 0 0 chrX 10308498 10308646 -156341650 - B1_Mur3 SINE Alu 0 149 2 5 663 1617 22 5 0 chrX 10308660 10308845 -156341451 - B2_Mm1t SINE B2 -6 187 2 5 663 319 291 13 0 chrX 10309121 10309200 -156341096 - ID SINE ID -143 81 2 5 663 189 304 14 14 chrX 10309215 10309285 -156341011 + L2 LINE L2 2607 2676 -743 5 663 401 296 54 31 chrX 10309358 10309487 -156340809 - ID_B1 SINE B4 -91 133 2 5 663 318 375 143 16 chrX 10310115 10310486 -156339810 + L2 LINE L2 2665 3082 -337 5 663 305 308 87 87 chrX 10310502 10310727 -156339569 - MLT1J LTR MaLR -36 476 251 5 663 897 152 122 64 chrX 10310727 10310931 -156339365 + B3 SINE B2 1 216 0 5 663 317 315 70 16 chrX 10311124 10311253 -156339043 - MLT1J LTR MaLR -371 141 6 5 663 444 147 0 0 chrX 10312525 10312600 -156337696 + (T)n Simple_repeat Simple_repeat 1 75 0 5 663 235 314 0 0 chrX 10312775 10312845 -156337451 - PB1D10 SINE Alu -5 112 43 5 663 243 0 0 0 chrX 10312981 10313008 -156337288 + (A)n Simple_repeat Simple_repeat 1 27 0 5 663 324 158 0 0 chrX 10313712 10313769 -156336527 + (TAA)n Simple_repeat Simple_repeat 3 59 0 5 663 899 49 97 16 chrX 10313891 10314015 -156336281 + B1_Mus2 SINE Alu 3 136 -11 5 663 360 0 0 0 chrX 10314015 10314055 -156336241 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 5 663 527 269 28 21 chrX 10314244 10314388 -156335908 - B1_Mur1 SINE Alu -2 147 3 5 663 352 300 234 0 chrX 10315386 10315693 -156334603 + L1ME2 LINE L1 5597 5975 -189 5 663 1419 257 64 40 chrX 10316123 10316670 -156333626 + L1MC3 LINE L1 7200 7759 -26 5 663 279 0 0 0 chrX 10317098 10317129 -156333167 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 5 663 210 37 0 0 chrX 10317568 10317595 -156332701 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 663 315 0 0 0 chrX 10318142 10318177 -156332119 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 663 25 0 0 0 chrX 10319101 10319126 -156331170 + AT_rich Low_complexity Low_complexity 1 25 0 5 663 704 231 52 6 chrX 10319141 10319315 -156330981 - B3A SINE B2 -16 182 1 5 663 555 225 33 53 chrX 10319750 10319900 -156330396 - B1_Mus2 SINE Alu 0 147 1 5 663 31 0 0 0 chrX 10320121 10320152 -156330144 + AT_rich Low_complexity Low_complexity 1 31 0 5 663 302 264 88 48 chrX 10320492 10320639 -156329657 + RSINE1 SINE B4 12 164 -1 5 663 207 176 59 0 chrX 10320736 10320787 -156329509 + GA-rich Low_complexity Low_complexity 4 57 0 5 663 197 33 33 0 chrX 10321040 10321070 -156329226 + (TTG)n Simple_repeat Simple_repeat 3 33 0 5 663 791 20 10 0 chrX 10321070 10321169 -156329127 - B1_Mus2 SINE Alu 0 147 48 5 663 231 61 0 0 chrX 10321873 10321906 -156328390 + (CATG)n Simple_repeat Simple_repeat 1 33 0 5 663 378 216 195 18 chrX 10321935 10322048 -156328248 - RSINE1 SINE B4 -21 144 12 5 663 220 265 29 0 chrX 10322206 10322274 -156328022 + CT-rich Low_complexity Low_complexity 3 72 0 5 663 495 207 87 40 chrX 10322396 10322522 -156327774 - RSINE1 SINE B4 -31 134 3 5 663 2863 122 45 7 chrX 10323836 10324309 -156325987 + RMER16 LTR ERVK 1 533 0 5 663 848 181 165 0 chrX 10324594 10324776 -156325520 - B3 SINE B2 0 216 5 5 663 250 413 13 0 chrX 10324916 10325071 -156325225 + L3 LINE CR1 3635 3791 -698 5 663 216 359 81 40 chrX 10326105 10326253 -156324043 + L3 LINE CR1 4262 4415 -74 5 663 225 0 0 0 chrX 10326279 10326304 -156323992 + (TCCC)n Simple_repeat Simple_repeat 1 25 0 5 663 785 184 0 6 chrX 10326307 10326471 -156323825 + CT-rich Low_complexity Low_complexity 3 165 0 5 663 877 172 0 0 chrX 10326471 10326605 -156323691 - B1_Mur4 SINE Alu -14 136 3 5 663 652 370 45 39 chrX 10326945 10327300 -156322996 - MLT1J LTR MaLR -49 463 107 5 663 444 19 0 0 chrX 10327809 10327862 -156322434 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 663 288 0 0 0 chrX 10327862 10327893 -156322403 + (GA)n Simple_repeat Simple_repeat 1 32 0 5 663 387 0 0 0 chrX 10328123 10328166 -156322130 + (TC)n Simple_repeat Simple_repeat 2 44 0 6 663 866 170 6 0 chrX 10330072 10330243 -156320053 + CT-rich Low_complexity Low_complexity 1 172 0 6 663 319 262 157 9 chrX 10330248 10330356 -156319940 - PB1D7 SINE Alu -21 128 5 6 663 24 0 0 0 chrX 10331753 10331777 -156318519 + AT_rich Low_complexity Low_complexity 1 24 0 6 663 584 169 23 78 chrX 10332146 10332274 -156318022 + MER63B DNA AcHobo 316 436 0 6 663 210 71 0 0 chrX 10332315 10332343 -156317953 + (A)n Simple_repeat Simple_repeat 1 28 0 6 663 402 266 128 11 chrX 10332462 10332641 -156317655 + L1ME2z LINE L1 5914 6113 -331 6 663 330 281 72 22 chrX 10332754 10332892 -156317404 + L1MC4a LINE L1 6409 6553 -1329 6 663 3073 265 93 75 chrX 10332892 10333207 -156317089 + L1MC3 LINE L1 6201 6565 -1220 6 663 216 0 0 0 chrX 10333207 10333231 -156317065 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 663 3073 265 93 75 chrX 10333231 10334158 -156316138 + L1MC3 LINE L1 6566 7517 -268 6 663 622 300 5 53 chrX 10334158 10334348 -156315948 + B3A SINE B2 2 182 -16 6 663 3073 265 93 75 chrX 10334348 10334660 -156315636 + L1MC3 LINE L1 7518 7785 0 6 663 802 269 81 5 chrX 10336665 10336863 -156313433 + ID_B1 SINE B4 4 216 -8 6 663 654 355 95 65 chrX 10336939 10337412 -156312884 + LTR16C LTR ERVL 1 487 -2 6 663 2086 195 61 3 chrX 10338526 10338917 -156311379 - RMER19B LTR ERVK 0 902 489 6 663 667 199 0 212 chrX 10338892 10339109 -156311187 - RMER19B LTR ERVK -731 171 1 6 663 598 289 15 7 chrX 10339388 10339524 -156310772 - B3A SINE B2 -59 139 3 6 663 500 241 99 28 chrX 10339567 10339581 -156310715 - B3A SINE B2 0 198 186 6 663 474 108 0 0 chrX 10339581 10339655 -156310641 + (TG)n Simple_repeat Simple_repeat 1 74 0 6 663 500 241 99 28 chrX 10339655 10339781 -156310515 - B3A SINE B2 -13 185 48 6 663 323 328 101 49 chrX 10341137 10341445 -156308851 + L2 LINE L2 2753 3076 -343 6 663 788 138 68 68 chrX 10341793 10341941 -156308355 + B1_Mur2 SINE Alu 2 149 0 6 663 571 279 150 28 chrX 10342266 10342513 -156307783 + Ricksha_c DNA MuDR 374 650 -1398 6 663 477 0 0 0 chrX 10342675 10342728 -156307568 + (TC)n Simple_repeat Simple_repeat 1 53 0 6 663 402 173 62 0 chrX 10343787 10343868 -156306428 - L2a LINE L2 -3 3423 3338 6 663 1277 277 70 44 chrX 10343890 10344389 -156305907 + L1ME1 LINE L1 5644 6155 -24 6 663 237 310 66 21 chrX 10344725 10344913 -156305383 + LTR16C LTR ERVL 259 486 -3 6 663 713 344 109 27 chrX 10344981 10345504 -156304792 - L2a LINE L2 -264 3162 2598 6 663 455 216 200 0 chrX 10345522 10345648 -156304648 + B3A SINE B2 5 154 -44 6 663 486 0 0 0 chrX 10345648 10345702 -156304594 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 663 297 234 152 40 chrX 10345702 10345726 -156304570 + B2_Mm2 SINE B2 150 171 -24 6 663 222 326 271 14 chrX 10345893 10346033 -156304263 - L2a LINE L2 -1439 1980 1805 6 663 629 242 0 0 chrX 10346090 10346218 -156304078 - Lx6 LINE L1 -218 7242 7115 6 663 792 178 142 35 chrX 10346262 10346431 -156303865 - B2_Mm2 SINE B2 -7 188 2 6 663 1435 66 16 11 chrX 10346434 10346618 -156303678 - B2_Mm2 SINE B2 -9 186 2 6 663 383 0 0 21 chrX 10346649 10346697 -156303599 + (TTA)n Simple_repeat Simple_repeat 2 48 0 6 663 1155 84 0 7 chrX 10346698 10346841 -156303455 - B1_Mus2 SINE Alu -4 143 2 6 663 246 174 0 0 chrX 10347038 10347084 -156303212 - Lx6 LINE L1 -246 7214 7169 6 663 2142 193 19 27 chrX 10347079 10347866 -156302430 - L1_Mur3 LINE L1 -4257 1623 843 6 663 439 273 0 8 chrX 10347908 10348037 -156302259 - L1_Mur3 LINE L1 -7456 272 145 6 663 236 191 0 60 chrX 10348037 10348087 -156302209 - B2_Mm2 SINE B2 -148 47 1 6 663 1085 265 114 96 chrX 10348136 10348609 -156301687 + L1MA8 LINE L1 5573 6064 -227 6 663 1250 219 0 14 chrX 10348609 10348827 -156301469 + B3 SINE B2 2 216 0 6 663 1085 265 114 96 chrX 10348827 10349053 -156301243 + L1MA8 LINE L1 6065 6285 -6 6 663 732 311 66 23 chrX 10349058 10349315 -156300981 + B4A SINE B4 1 268 -24 6 663 207 0 0 0 chrX 10349315 10349338 -156300958 + (CATA)n Simple_repeat Simple_repeat 3 25 0 6 663 315 0 0 0 chrX 10349367 10349402 -156300894 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 663 264 122 0 0 chrX 10349496 10349537 -156300759 + (CACCAT)n Simple_repeat Simple_repeat 4 44 0 6 663 227 265 107 12 chrX 10349545 10349629 -156300667 - MLT2B5 LTR ERVL -187 368 277 6 663 1094 287 83 40 chrX 10349912 10350115 -156300181 - MTD LTR MaLR -3 416 206 6 663 872 203 0 7 chrX 10350115 10350264 -156300032 - B1_Mur3 SINE Alu -1 148 1 6 663 1094 287 83 40 chrX 10350264 10350459 -156299837 - MTD LTR MaLR -214 205 1 6 663 887 129 58 0 chrX 10350509 10350648 -156299648 + B1_Mus1 SINE Alu 1 147 -1 6 663 466 287 81 65 chrX 10350858 10351044 -156299252 + MER5A DNA MER1_type 1 189 0 6 663 512 186 2 2 chrX 10351311 10351404 -156298892 - B1_Mur4 SINE Alu -21 129 35 6 663 806 351 136 61 chrX 10352480 10352525 -156297771 + MER115 DNA Tip100 8 52 -641 6 663 380 292 107 13 chrX 10352525 10352674 -156297622 + MER5A1 DNA MER1_type 1 163 -3 6 663 806 351 136 61 chrX 10352674 10353266 -156297030 + MER115 DNA Tip100 53 693 0 6 663 356 324 45 2 chrX 10353602 10353725 -156296571 - MER5A DNA MER1_type -63 126 1 6 663 360 0 0 0 chrX 10354533 10354573 -156295723 + (ATTG)n Simple_repeat Simple_repeat 2 41 0 6 82 1303 27 7 0 chrX 10354573 10354719 -156295577 - B1_Mus1 SINE Alu -1 147 1 6 664 965 55 0 8 chrX 10355014 10355143 -156295153 + (TTC)n Simple_repeat Simple_repeat 2 129 0 6 664 892 211 154 81 chrX 10356088 10356485 -156293811 - Lx7 LINE L1 0 7696 7271 6 664 291 93 0 0 chrX 10356684 10356727 -156293569 + (T)n Simple_repeat Simple_repeat 1 43 0 6 664 1055 92 42 7 chrX 10356975 10357117 -156293179 - B1_Mus1 SINE Alu 0 148 2 6 664 521 286 30 39 chrX 10357610 10357814 -156292482 - MIR SINE MIR -55 213 14 6 664 246 316 73 73 chrX 10358008 10358218 -156292078 + MIRc SINE MIR 2 227 -41 6 664 280 239 32 64 chrX 10358584 10358678 -156291618 - Charlie9 DNA MER1_type 0 2757 2667 6 664 22 0 0 0 chrX 10358830 10358852 -156291444 + AT_rich Low_complexity Low_complexity 1 22 0 6 664 235 228 23 211 chrX 10359548 10359635 -156290661 + L2b LINE L2 3259 3332 -43 6 664 620 168 284 12 chrX 10359635 10359804 -156290492 - B3 SINE B2 0 216 2 6 664 235 228 23 211 chrX 10359804 10359844 -156290452 + L2b LINE L2 3333 3362 -13 6 664 562 295 123 106 chrX 10360765 10361166 -156289130 - L1ME3A LINE L1 -2 6171 5771 6 664 604 212 9 26 chrX 10361166 10361282 -156289014 - PB1D10 SINE Alu -1 116 3 6 664 562 295 123 106 chrX 10361282 10361505 -156288791 - L1ME3A LINE L1 -403 5770 5536 6 664 325 332 55 35 chrX 10361851 10362055 -156288241 + MIR SINE MIR 36 218 -50 6 664 219 69 0 0 chrX 10362132 10362161 -156288135 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 664 681 245 14 7 chrX 10362186 10362326 -156287970 + B1_Mm SINE Alu 1 141 -6 6 664 286 312 78 84 chrX 10362195 10362349 -156287947 + B4A SINE B4 94 246 -46 6 664 646 174 7 7 chrX 10362349 10362488 -156287808 + GA-rich Low_complexity Low_complexity 3 141 0 6 664 624 27 0 0 chrX 10362512 10362586 -156287710 + (GGAA)n Simple_repeat Simple_repeat 4 77 0 6 664 607 217 153 0 chrX 10362848 10363005 -156287291 + B3 SINE B2 35 215 -1 6 664 679 120 8 8 chrX 10363037 10363155 -156287141 + (GAGAA)n Simple_repeat Simple_repeat 5 122 0 6 664 226 377 87 5 chrX 10363871 10364079 -156286217 - MIRb SINE MIR -34 234 10 6 664 466 156 10 3 chrX 10364120 10364203 -156286093 + B3 SINE B2 38 124 -71 6 664 469 264 84 39 chrX 10364305 10364459 -156285837 + B3 SINE B2 53 213 -3 6 664 994 183 194 0 chrX 10364469 10364649 -156285647 + B3 SINE B2 2 216 0 6 664 27 29 0 0 chrX 10364666 10364700 -156285596 + AT_rich Low_complexity Low_complexity 1 34 0 6 664 439 249 103 16 chrX 10365092 10365276 -156285020 - L1ME3A LINE L1 -2995 3151 2952 6 664 307 387 47 83 chrX 10365779 10366117 -156284179 - L1ME3A LINE L1 -5757 485 160 6 664 448 261 71 9 chrX 10367408 10367520 -156282776 + RSINE1 SINE B4 3 121 -44 6 664 948 125 0 0 chrX 10367526 10367686 -156282610 + (CA)n Simple_repeat Simple_repeat 2 161 0 6 664 821 110 26 0 chrX 10367710 10367864 -156282432 + (CA)n Simple_repeat Simple_repeat 1 158 0 6 664 456 214 159 9 chrX 10368301 10368414 -156281882 - B1_Mur1 SINE Alu -8 141 12 6 664 209 259 0 36 chrX 10368964 10369020 -156281276 + L2a LINE L2 3372 3425 -1 6 664 870 158 20 7 chrX 10369124 10369271 -156281025 + B1_Mur3 SINE Alu 1 149 0 6 664 258 32 0 0 chrX 10369279 10369310 -156280986 + (CCA)n Simple_repeat Simple_repeat 3 33 0 6 664 297 0 0 0 chrX 10369310 10369343 -156280953 + (CAA)n Simple_repeat Simple_repeat 1 33 0 6 664 661 379 34 17 chrX 10369363 10369661 -156280635 + LTR16A LTR ERVL 40 342 -109 6 664 323 295 132 63 chrX 10369946 10370192 -156280104 + MIRc SINE MIR 7 267 -1 6 664 627 51 0 0 chrX 10371119 10371198 -156279098 + (TG)n Simple_repeat Simple_repeat 2 80 0 6 664 18889 20 0 0 chrX 10372319 10375155 -156275141 - L1Md_T LINE L1 0 6582 3747 6 664 671 212 88 0 chrX 10375338 10375475 -156274821 + B1_Mur2 SINE Alu 1 149 0 6 664 394 210 0 95 chrX 10375510 10375525 -156274771 + MT2B LTR ERVL 153 156 -445 6 664 694 140 0 0 chrX 10375525 10375632 -156274664 + B1_Mus1 SINE Alu 3 109 -39 6 664 273 296 220 0 chrX 10376039 10376198 -156274098 - MIR SINE MIR -48 214 21 6 664 697 58 0 1 chrX 10377271 10377368 -156272928 - L1Md_F2 LINE L1 -651 5931 5836 6 664 3754 51 0 5 chrX 10377369 10377805 -156272491 + L1Md_F2 LINE L1 6137 6570 -12 6 664 288 330 10 0 chrX 10378008 10378108 -156272188 + (TG)n Simple_repeat Simple_repeat 2 102 0 6 664 354 309 114 0 chrX 10378110 10378233 -156272063 - B4A SINE B4 -148 144 8 6 664 882 184 85 0 chrX 10378445 10378668 -156271628 - Lx9 LINE L1 0 7644 7403 6 664 408 212 0 12 chrX 10378661 10378747 -156271549 + Lx9 LINE L1 7304 7388 -256 6 664 217 318 108 9 chrX 10378763 10378874 -156271422 + MIRb SINE MIR 120 241 -27 6 664 339 284 21 161 chrX 10378948 10379141 -156271155 + B3A SINE B2 51 216 0 6 664 1273 43 0 0 chrX 10379171 10379311 -156270985 + B1_Mus1 SINE Alu 1 140 -8 6 664 1021 235 10 0 chrX 10379439 10379643 -156270653 + B3 SINE B2 1 206 -10 7 664 201 253 72 62 chrX 10381609 10381706 -156268590 - L3 LINE CR1 -3685 804 707 7 664 845 268 14 42 chrX 10382456 10382670 -156267626 - B3 SINE B2 -5 211 4 7 664 416 270 10 0 chrX 10382954 10383054 -156267242 + MLT1A0 LTR MaLR 263 363 -2 7 664 1050 66 80 0 chrX 10383268 10383405 -156266891 + B1_Mus1 SINE Alu 1 148 0 7 664 297 0 0 0 chrX 10383405 10383438 -156266858 + (A)n Simple_repeat Simple_repeat 1 33 0 7 664 202 143 41 0 chrX 10385012 10385061 -156265235 + CT-rich Low_complexity Low_complexity 5 55 0 7 664 620 296 148 45 chrX 10385682 10385723 -156264573 - Charlie4a DNA MER1_type -39 469 438 7 664 1285 43 165 6 chrX 10385723 10385738 -156264558 - B2_Mm1a SINE B2 -3 190 176 7 664 330 26 0 0 chrX 10385738 10385777 -156264519 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 7 664 1285 43 165 6 chrX 10385777 10385925 -156264371 - B2_Mm1a SINE B2 -18 175 1 7 664 620 296 148 45 chrX 10385925 10386262 -156264034 - Charlie4a DNA MER1_type -71 437 52 7 664 198 0 0 0 chrX 10386643 10386665 -156263631 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 7 664 744 243 32 25 chrX 10387483 10387762 -156262534 - RMER17C LTR ERVK -50 360 80 7 664 506 203 55 103 chrX 10387773 10388123 -156262173 - RMER17C LTR ERVK -228 581 3 7 664 243 0 0 0 chrX 10388234 10388261 -156262035 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 7 664 450 83 0 0 chrX 10388838 10388910 -156261386 + (TC)n Simple_repeat Simple_repeat 1 72 0 7 664 390 21 0 0 chrX 10389032 10389079 -156261217 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 664 320 338 85 68 chrX 10389167 10389302 -156260994 - ORR1E LTR MaLR -120 239 94 7 664 1444 127 5 9 chrX 10389302 10389524 -156260772 - URR1A DNA MER1_type -1 225 5 7 664 320 338 85 68 chrX 10389524 10389623 -156260673 - ORR1E LTR MaLR -266 93 1 7 664 556 14 27 0 chrX 10389637 10389710 -156260586 + (GA)n Simple_repeat Simple_repeat 2 76 0 7 664 211 161 0 35 chrX 10389907 10389965 -156260331 + G-rich Low_complexity Low_complexity 5 60 0 7 664 286 364 139 6 chrX 10390254 10390420 -156259876 - MIRc SINE MIR -62 206 19 7 664 581 0 14 0 chrX 10390587 10390656 -156259640 + (TC)n Simple_repeat Simple_repeat 2 71 0 7 664 2162 171 77 3 chrX 10391148 10391540 -156258756 - MTC LTR MaLR 0 421 1 7 664 889 284 64 145 chrX 10391778 10392186 -156258110 - MTE2a LTR MaLR 0 379 5 7 664 21 36 0 0 chrX 10392849 10392877 -156257419 + AT_rich Low_complexity Low_complexity 1 28 0 7 664 979 283 36 39 chrX 10393547 10393856 -156256440 - MTE2b LTR MaLR 0 379 72 7 664 208 354 0 0 chrX 10393901 10393966 -156256330 - L2c LINE L2 -297 3090 3026 7 664 275 358 108 23 chrX 10394419 10394679 -156255617 - L2c LINE L2 -1322 2097 1816 7 664 269 339 9 35 chrX 10394739 10394852 -156255444 - PB1D10 SINE Alu -6 111 2 7 664 184 362 91 30 chrX 10394906 10395137 -156255159 - L2c LINE L2 -1708 1711 1467 7 664 7108 66 4 13 chrX 10395390 10396525 -156253771 - L1_Mus2 LINE L1 0 6566 5435 7 664 584 310 52 0 chrX 10396853 10397027 -156253269 - MER5A DNA MER1_type 0 189 7 7 664 301 282 13 0 chrX 10400300 10400378 -156249918 + ID_B1 SINE B4 146 224 0 7 664 261 83 0 0 chrX 10400393 10400429 -156249867 + (GGAA)n Simple_repeat Simple_repeat 2 37 0 7 664 1024 179 0 35 chrX 10400773 10400970 -156249326 + B2_Mm2 SINE B2 1 190 -5 7 664 198 0 0 0 chrX 10400970 10400992 -156249304 + (GGAA)n Simple_repeat Simple_repeat 3 24 0 7 664 612 40 0 0 chrX 10400992 10401066 -156249230 + (GA)n Simple_repeat Simple_repeat 2 76 0 7 664 1208 103 17 0 chrX 10401067 10401242 -156249054 + B2_Mm2 SINE B2 2 179 -16 7 664 1079 117 6 0 chrX 10401242 10401413 -156248883 + (GAAA)n Simple_repeat Simple_repeat 2 173 0 7 664 531 322 102 26 chrX 10401802 10402232 -156248064 + L1ME2 LINE L1 5594 6056 -108 7 664 204 254 31 31 chrX 10402663 10402728 -156247568 - L2a LINE L2 -8 3418 3354 7 664 337 373 53 7 chrX 10403476 10403627 -156246669 + MER2B DNA MER2_type 6 163 -173 7 664 468 231 99 0 chrX 10403733 10403852 -156246444 + MER2 DNA MER2_type 96 226 -119 7 664 1053 326 19 38 chrX 10403852 10404273 -156246023 + MT2A LTR ERVL 3 415 -118 7 664 777 190 90 28 chrX 10404341 10404552 -156245744 + URR1B DNA MER1_type 2 225 0 7 664 499 319 79 21 chrX 10404716 10404905 -156245391 - B4A SINE B4 -86 206 7 7 664 181 346 39 29 chrX 10405644 10405748 -156244548 - MIRc SINE MIR -96 172 68 7 664 273 109 0 0 chrX 10406792 10406838 -156243458 + (CAAAC)n Simple_repeat Simple_repeat 1 46 0 7 664 216 0 0 0 chrX 10407075 10407099 -156243197 + (T)n Simple_repeat Simple_repeat 1 24 0 7 664 939 49 8 0 chrX 10407099 10407221 -156243075 - B1_Mm SINE Alu 0 147 25 7 664 201 197 0 0 chrX 10407595 10407661 -156242635 + (CA)n Simple_repeat Simple_repeat 1 66 0 7 664 232 388 12 0 chrX 10407777 10407857 -156242439 - LTR16A1 LTR ERVL 0 456 376 7 664 978 121 17 6 chrX 10408036 10408211 -156242085 + (TTCC)n Simple_repeat Simple_repeat 3 179 0 7 664 229 229 0 79 chrX 10408556 10408632 -156241664 - RMER12 LTR ERVK -217 1105 1036 7 664 187 265 10 144 chrX 10408671 10408768 -156241528 - MIRm SINE MIR -142 134 51 7 664 315 302 66 0 chrX 10408898 10409004 -156241292 + ID_B1 SINE B4 81 193 -31 7 664 1247 295 36 69 chrX 10409079 10409749 -156240547 - L1ME1 LINE L1 -54 6125 5478 7 664 393 232 77 28 chrX 10409909 10410091 -156240205 - L1ME1 LINE L1 -759 5387 5197 7 664 306 312 39 15 chrX 10410202 10410332 -156239964 - B1F SINE Alu -14 135 3 7 664 192 152 0 0 chrX 10410374 10410407 -156239889 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 7 664 487 260 0 91 chrX 10410450 10410615 -156239681 - B1_Mur4 SINE Alu 0 150 1 7 664 450 0 0 0 chrX 10410626 10410676 -156239620 + (TA)n Simple_repeat Simple_repeat 2 51 0 7 664 543 308 32 52 chrX 10410906 10411211 -156239085 + B4 SINE B4 1 285 -7 7 664 316 292 57 0 chrX 10411357 10411463 -156238833 + PB1D9 SINE Alu 2 113 -7 7 664 205 267 147 0 chrX 10412258 10412333 -156237963 + MIR SINE MIR 115 200 -62 7 664 233 366 114 51 chrX 10413369 10413605 -156236691 - LTR78 LTR ERV1 -347 957 707 7 664 1815 101 125 3 chrX 10414203 10414491 -156235805 + ORR1A2 LTR MaLR 5 327 0 7 664 777 319 55 86 chrX 10414491 10415037 -156235259 + Lx8 LINE L1 6362 6890 -583 7 664 492 289 23 0 chrX 10415021 10415149 -156235147 + Lx8 LINE L1 7105 7235 -238 7 664 245 167 0 0 chrX 10415192 10415246 -156235050 + Lx8 LINE L1 7420 7473 0 7 664 180 111 0 0 chrX 10415291 10415318 -156234978 + (TTTCC)n Simple_repeat Simple_repeat 4 30 0 7 664 889 112 42 7 chrX 10415340 10415484 -156234812 - B1_Mur4 SINE Alu 0 150 2 7 664 21 0 0 0 chrX 10416138 10416159 -156234137 + AT_rich Low_complexity Low_complexity 1 21 0 7 664 248 0 31 0 chrX 10416656 10416688 -156233608 + (TTAA)n Simple_repeat Simple_repeat 3 35 0 7 664 1197 56 0 0 chrX 10416690 10416834 -156233462 - B1_Mus1 SINE Alu -3 145 2 7 664 399 41 0 0 chrX 10417204 10417253 -156233043 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 664 296 295 78 0 chrX 10417284 10417413 -156232883 + Lx7 LINE L1 7553 7691 -5 7 664 186 43 0 0 chrX 10417803 10417826 -156232470 + (TCC)n Simple_repeat Simple_repeat 2 24 0 7 664 803 318 48 56 chrX 10418808 10419165 -156231131 + MLT1F2 LTR MaLR 207 560 0 7 664 190 328 106 79 chrX 10419966 10420155 -156230141 + MIR3 SINE MIR 14 207 -1 7 664 308 227 113 93 chrX 10420544 10420738 -156229558 - Lx9 LINE L1 0 7644 7447 7 664 3095 78 0 2 chrX 10421108 10421507 -156228789 + MTB LTR MaLR 3 400 0 7 664 656 286 54 10 chrX 10421947 10422152 -156228144 + MIR SINE MIR 46 259 -3 7 664 617 93 9 0 chrX 10422227 10422334 -156227962 + (CA)n Simple_repeat Simple_repeat 2 109 0 7 664 380 71 18 0 chrX 10422367 10422423 -156227873 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 7 664 2982 49 41 13 chrX 10423074 10423463 -156226833 + MTB LTR MaLR 1 400 0 7 664 379 224 88 53 chrX 10424242 10424355 -156225941 + PB1D10 SINE Alu 1 117 0 7 664 190 327 35 78 chrX 10424467 10424583 -156225713 + L2c LINE L2 3017 3127 -260 7 664 717 45 0 0 chrX 10424682 10424771 -156225525 + (TTCTC)n Simple_repeat Simple_repeat 4 92 0 7 664 226 167 33 115 chrX 10424773 10424834 -156225462 - ID SINE ID -166 58 3 7 664 543 289 42 11 chrX 10424903 10425192 -156225104 + L1MB7 LINE L1 5609 5948 -236 7 664 304 227 21 74 chrX 10425277 10425372 -156224924 - B1F SINE Alu 0 149 60 7 664 344 283 14 14 chrX 10425404 10425551 -156224745 + L1MB7 LINE L1 6030 6176 -2 7 664 315 0 0 0 chrX 10425561 10425596 -156224700 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 664 531 0 0 0 chrX 10425596 10425654 -156224642 + (GA)n Simple_repeat Simple_repeat 2 60 0 7 664 258 143 0 0 chrX 10426278 10426327 -156223969 + (TTTC)n Simple_repeat Simple_repeat 2 50 0 7 664 214 366 99 33 chrX 10426411 10426592 -156223704 - MIRb SINE MIR -65 203 11 7 664 594 343 78 58 chrX 10427639 10427983 -156222313 + LTR16E1 LTR ERVL 187 537 -1 7 664 1662 193 71 22 chrX 10428770 10429136 -156221160 - ORR1C2 LTR MaLR 0 384 1 7 664 240 292 56 9 chrX 10429580 10429687 -156220609 - MLT1H2 LTR MaLR -309 180 69 7 664 222 323 58 48 chrX 10430673 10430777 -156219519 + MIRb SINE MIR 30 134 -134 7 664 1310 71 55 0 chrX 10430799 10430824 -156219472 - B2_Mm2 SINE B2 -3 192 161 7 664 570 29 0 0 chrX 10430824 10430892 -156219404 + (TA)n Simple_repeat Simple_repeat 2 69 0 7 664 1310 71 55 0 chrX 10430892 10431048 -156219248 - B2_Mm2 SINE B2 -35 160 2 7 664 243 189 0 0 chrX 10431576 10431629 -156218667 + (TG)n Simple_repeat Simple_repeat 1 53 0 7 664 1057 176 59 20 chrX 10432327 10432530 -156217766 - B3 SINE B2 -5 211 1 7 664 877 55 0 0 chrX 10432545 10432654 -156217642 + B2_Mm2 SINE B2 1 109 -86 8 664 246 288 108 85 chrX 10432654 10432674 -156217622 + ID_B1 SINE B4 1 132 -92 8 664 421 398 81 0 chrX 10432883 10433119 -156217177 + LTR16E2 LTR ERVL 287 541 -27 8 664 346 280 83 25 chrX 10433326 10433447 -156216849 - B1F SINE Alu -2 147 20 8 664 222 225 0 0 chrX 10433414 10433454 -156216842 - B4A SINE B4 -155 137 98 8 664 424 291 99 45 chrX 10433618 10433992 -156216304 + L1ME2 LINE L1 5545 5938 -226 8 664 334 333 68 93 chrX 10436052 10436382 -156213914 - ORR1D2 LTR MaLR -4 370 49 8 664 248 358 77 45 chrX 10436416 10436571 -156213725 - MLT1H1 LTR MaLR -22 569 410 8 664 1090 280 39 42 chrX 10436690 10436996 -156213300 - ORR1E LTR MaLR -12 347 43 8 664 381 338 52 8 chrX 10436986 10437120 -156213176 - MLT1H1 LTR MaLR -412 143 4 8 664 190 309 0 0 chrX 10437439 10437494 -156212802 - MIRc SINE MIR -53 215 161 8 664 222 336 84 35 chrX 10437528 10437670 -156212626 - MIR SINE MIR -101 161 13 8 664 429 323 52 26 chrX 10441060 10441251 -156209045 - B3A SINE B2 -2 196 1 8 664 287 25 0 24 chrX 10441383 10441424 -156208872 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 664 505 296 29 20 chrX 10441583 10441745 -156208551 - ID_B1 SINE B4 -1 223 67 8 664 796 241 34 82 chrX 10441750 10441958 -156208338 - B3A SINE B2 0 198 1 8 664 809 128 0 7 chrX 10442075 10442224 -156208072 + (TTC)n Simple_repeat Simple_repeat 2 149 0 8 664 468 0 0 0 chrX 10442977 10443029 -156207267 + (TA)n Simple_repeat Simple_repeat 2 53 0 8 664 321 328 8 78 chrX 10443235 10443364 -156206932 + RSINE1 SINE B4 46 165 0 8 664 1227 299 48 50 chrX 10443502 10444080 -156206216 + L1ME2z LINE L1 5711 6287 -157 8 664 235 175 34 34 chrX 10445303 10445362 -156204934 - L2c LINE L2 -5 3421 3334 8 664 392 277 32 0 chrX 10445841 10445935 -156204361 + PB1D10 SINE Alu 21 117 0 8 664 389 281 46 23 chrX 10447254 10447385 -156202911 - MER5A1 DNA MER1_type -6 160 27 8 664 186 265 252 10 chrX 10447432 10447535 -156202761 + MIR SINE MIR 111 238 -24 8 664 1761 68 0 5 chrX 10447915 10448136 -156202160 - L1Md_F2 LINE L1 -15 6567 6348 8 664 335 270 0 50 chrX 10448216 10448323 -156201973 + RSINE1 SINE B4 4 104 -61 8 664 314 375 74 30 chrX 10448633 10448864 -156201432 + MIRb SINE MIR 11 251 -17 8 664 260 344 41 35 chrX 10449252 10449421 -156200875 + MLT1A0 LTR MaLR 1 170 -195 8 664 395 341 87 11 chrX 10449502 10449686 -156200610 + MLT1A0 LTR MaLR 142 339 -26 8 664 384 283 0 39 chrX 10449686 10449789 -156200507 - RSINE1 SINE B4 -61 104 6 8 664 346 330 184 62 chrX 10451564 10451868 -156198428 - MLT1J LTR MaLR -159 353 13 8 664 24 53 0 0 chrX 10451908 10451946 -156198350 + AT_rich Low_complexity Low_complexity 1 38 0 8 664 602 320 51 50 chrX 10452229 10452588 -156197708 + ORR1E LTR MaLR 2 379 0 8 664 390 339 9 0 chrX 10452674 10452789 -156197507 - MER91B DNA Tip100 -28 162 47 8 664 3297 49 28 15 chrX 10453050 10453445 -156196851 + MTB LTR MaLR 1 400 0 8 664 420 331 70 64 chrX 10453737 10454021 -156196275 - ORR1E LTR MaLR -17 353 48 8 664 212 300 87 22 chrX 10455451 10455543 -156194753 - MIRc SINE MIR -59 209 112 8 664 624 332 19 34 chrX 10455544 10455806 -156194490 - MIR SINE MIR -3 259 2 8 664 322 256 0 13 chrX 10456621 10456700 -156193596 - LTR16C LTR ERVL -6 483 406 8 664 211 348 14 0 chrX 10456716 10456785 -156193511 + ID4_ SINE ID 5 74 -9 8 664 324 370 120 35 chrX 10456798 10456967 -156193329 - LTR16C LTR ERVL -94 395 212 8 664 2987 137 124 28 chrX 10456967 10457501 -156192795 + RMER4B LTR ERVK 1 585 0 8 664 324 370 120 35 chrX 10457501 10457647 -156192649 - LTR16C LTR ERVL -278 211 53 8 664 285 338 53 23 chrX 10457719 10457852 -156192444 - MLT1K LTR MaLR -5 590 454 8 664 1386 300 48 18 chrX 10458124 10458671 -156191625 + L1MA8 LINE L1 5651 6213 -78 8 664 266 73 24 0 chrX 10458714 10458755 -156191541 + (TA)n Simple_repeat Simple_repeat 2 43 0 8 664 465 215 40 203 chrX 10458934 10459058 -156191238 - Tigger7 DNA MER2_type -32 2459 2377 8 664 1062 121 0 13 chrX 10459058 10459209 -156191087 - B1_Mur3 SINE Alu 0 149 1 8 664 465 215 40 203 chrX 10459209 10459306 -156190990 - Tigger7 DNA MER2_type -115 2376 2274 8 664 1219 272 116 8 chrX 10459314 10459684 -156190612 - Tigger7 DNA MER2_type -2080 411 2 8 664 429 272 196 34 chrX 10459684 10459863 -156190433 - MER63A DNA AcHobo -2 208 1 8 664 234 0 0 0 chrX 10460731 10460757 -156189539 + (A)n Simple_repeat Simple_repeat 1 26 0 8 664 335 78 20 0 chrX 10461646 10461697 -156188599 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 664 208 345 127 24 chrX 10461840 10462000 -156188296 - MIRb SINE MIR -8 254 89 8 664 405 247 22 110 chrX 10462550 10462732 -156187564 - MIR SINE MIR -95 167 2 8 664 9021 23 0 0 chrX 10462806 10463855 -156186441 - L1Md_A LINE L1 0 6582 5528 8 664 784 321 130 32 chrX 10463986 10464395 -156185901 - MLT1F LTR MaLR -24 524 76 8 664 497 339 66 22 chrX 10464506 10464732 -156185564 + B4A SINE B4 1 236 -56 8 664 1819 180 84 3 chrX 10464737 10465083 -156185213 + ORR1D1 LTR MaLR 1 374 0 8 664 344 211 21 0 chrX 10465178 10465273 -156185023 + (CATA)n Simple_repeat Simple_repeat 3 99 0 8 664 317 49 24 0 chrX 10465275 10465316 -156184980 + HAL1-3A_ME LINE L1 1978 2019 -839 8 664 262 334 100 55 chrX 10466072 10466382 -156183914 - L2 LINE L2 -438 2981 2658 8 664 919 287 48 77 chrX 10466945 10467323 -156182973 - MLT1A LTR MaLR 0 374 8 8 664 305 307 61 12 chrX 10467644 10467809 -156182487 + L1MC LINE L1 5297 5469 -2413 8 664 24 53 0 0 chrX 10467973 10468011 -156182285 + AT_rich Low_complexity Low_complexity 1 38 0 8 664 278 321 103 43 chrX 10468699 10468816 -156181480 + ORR1E LTR MaLR 22 145 -214 8 664 206 379 7 36 chrX 10469289 10469426 -156180870 + MIRc SINE MIR 123 255 -13 8 664 292 246 0 110 chrX 10470437 10470510 -156179786 + MER58C DNA MER1_type 151 215 0 8 664 1016 62 70 0 chrX 10471518 10471646 -156178650 + B1_Mus2 SINE Alu 1 137 -10 8 664 639 0 0 0 chrX 10471646 10471717 -156178579 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 8 664 1146 124 158 10 chrX 10473240 10473436 -156176860 - URR1B DNA MER1_type 0 225 1 8 664 358 297 149 69 chrX 10475056 10475300 -156174996 + MLT1A1 LTR MaLR 1 279 -129 8 664 1349 73 45 0 chrX 10475300 10475477 -156174819 + B2_Mm2 SINE B2 5 189 -6 8 664 358 297 149 69 chrX 10475477 10475608 -156174688 + MLT1A1 LTR MaLR 280 406 -2 8 664 541 233 0 8 chrX 10475956 10476073 -156174223 - MER5A1 DNA MER1_type 0 166 51 8 664 201 380 49 14 chrX 10477150 10477294 -156173002 - L3 LINE CR1 -820 3669 3521 8 664 1056 108 0 0 chrX 10477538 10477695 -156172601 + (GGGAGA)n Simple_repeat Simple_repeat 1 157 0 8 664 216 127 0 60 chrX 10477714 10477781 -156172515 + (CAGAGA)n Simple_repeat Simple_repeat 4 66 0 8 664 370 312 164 18 chrX 10477924 10478149 -156172147 - LTR78 LTR ERV1 -77 1227 970 8 664 1653 230 95 16 chrX 10478498 10478878 -156171418 - MTD LTR MaLR 0 419 10 8 664 213 94 0 0 chrX 10478972 10479004 -156171292 + (TCTCTG)n Simple_repeat Simple_repeat 3 34 0 8 664 438 79 0 0 chrX 10479487 10479550 -156170746 + (CA)n Simple_repeat Simple_repeat 1 63 0 8 664 334 330 95 37 chrX 10479836 10480025 -156170271 - ORR1D2 LTR MaLR -165 205 6 8 664 420 20 0 0 chrX 10482561 10482610 -156167686 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 664 250 281 240 0 chrX 10482832 10482928 -156167368 + MER58A DNA MER1_type 1 119 -105 8 664 1775 210 128 31 chrX 10482912 10483429 -156166867 + RMER4B LTR ERVK 18 584 -1 8 664 387 277 8 43 chrX 10483440 10483557 -156166739 + MER58A DNA MER1_type 101 213 -11 8 664 846 355 120 24 chrX 10484959 10485550 -156164746 + MLT2F LTR ERVL 1 648 -15 8 665 216 399 45 45 chrX 10486658 10486860 -156163436 + L2a LINE L2 2969 3170 -256 8 665 186 43 0 0 chrX 10489210 10489233 -156161063 + (TTC)n Simple_repeat Simple_repeat 2 24 0 8 665 291 361 62 0 chrX 10489449 10489579 -156160717 - MIR3 SINE MIR -38 170 33 8 665 198 0 0 0 chrX 10490708 10490730 -156159566 + (T)n Simple_repeat Simple_repeat 1 22 0 8 665 219 250 49 16 chrX 10490751 10490812 -156159484 - MIR SINE MIR -55 153 91 8 665 306 289 141 0 chrX 10490964 10491099 -156159197 - L1MD1 LINE L1 -14 6228 6075 8 665 350 250 57 0 chrX 10491118 10491206 -156159090 - L1MD2 LINE L1 -213 6146 6054 8 665 190 179 0 0 chrX 10491248 10491276 -156159020 - L2c LINE L2 -80 3307 3280 8 665 3186 275 132 34 chrX 10491340 10491735 -156158561 - Lx8 LINE L1 -13 7460 7065 8 665 186 43 0 0 chrX 10491735 10491758 -156158538 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 665 3186 275 132 34 chrX 10491758 10492638 -156157658 - Lx8 LINE L1 -409 7064 6061 8 665 201 74 0 0 chrX 10492793 10492820 -156157476 + (TAA)n Simple_repeat Simple_repeat 2 28 0 8 665 243 295 88 9 chrX 10492897 10493010 -156157286 - L1MD1 LINE L1 -313 5866 5745 8 665 516 239 82 0 chrX 10493112 10493271 -156157025 - L1MD1 LINE L1 -1194 4952 4781 8 665 381 281 96 16 chrX 10493304 10493492 -156156804 + Arthur1 DNA Tip100 3654 3856 -91 8 665 1947 272 47 31 chrX 10493507 10494510 -156155786 + Lx9 LINE L1 6787 7392 -252 8 665 4215 156 118 71 chrX 10494510 10495371 -156154925 - RMER19B LTR ERVK 0 902 1 8 665 1947 294 63 32 chrX 10495371 10495456 -156154840 + Lx9 LINE L1 7393 7472 -172 8 665 222 37 0 0 chrX 10495483 10495510 -156154786 + (TATG)n Simple_repeat Simple_repeat 2 28 0 8 665 1616 242 38 48 chrX 10495580 10496057 -156154239 - Lx7 LINE L1 -903 4977 4506 8 665 2372 250 96 10 chrX 10496065 10496792 -156153504 + Lx7 LINE L1 5040 5834 -46 8 665 405 0 0 0 chrX 10496792 10496837 -156153459 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 665 2372 242 90 43 chrX 10496837 10497076 -156153220 + Lx7 LINE L1 5835 6077 -1619 8 665 1024 290 42 10 chrX 10497123 10497429 -156152867 + Lx8 LINE L1 7158 7473 0 8 665 1280 284 124 86 chrX 10497455 10497599 -156152697 - L1MD1 LINE L1 -1427 4719 4576 8 665 761 288 78 5 chrX 10497599 10497805 -156152491 + ID_B1 SINE B4 1 221 -3 8 665 1280 286 124 84 chrX 10497805 10499042 -156151254 - L1MD1 LINE L1 -1571 4575 3283 8 665 753 12 0 0 chrX 10499089 10499175 -156151121 + (TTTC)n Simple_repeat Simple_repeat 2 87 0 8 665 911 141 7 39 chrX 10499198 10499353 -156150943 - B1_Mur4 SINE Alu 0 150 1 8 665 3438 175 13 8 chrX 10499394 10500000 -156150296 - Lx2B LINE L1 -162 6838 6230 9 665 351 268 81 0 chrX 10500000 10500123 -156150173 - Lx2B LINE L1 -771 6229 6097 1 665 672 279 100 8 chrX 10500098 10500467 -156149829 - L1MD LINE L1 -3044 3102 2700 2 665 366 23 0 0 chrX 10500606 10500649 -156149647 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 665 315 0 0 0 chrX 10500649 10500683 -156149613 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 665 487 51 0 48 chrX 10500744 10500827 -156149469 - L1Md_F2 LINE L1 -2 6580 6502 5 665 320 254 83 17 chrX 10500966 10501086 -156149210 + Kanga2_a DNA Tc2 121 248 -640 6 665 8748 95 24 5 chrX 10501086 10502847 -156147449 + Lx3B LINE L1 5174 6971 -2 7 665 489 138 0 0 chrX 10502851 10502931 -156147365 + (CAG)n Simple_repeat Simple_repeat 2 81 0 8 665 213 244 0 0 chrX 10502931 10502972 -156147324 + B3 SINE B2 26 66 -150 9 665 324 143 31 31 chrX 10502968 10503033 -156147263 + B1F1 SINE Alu 85 149 0 1 665 20725 174 60 29 chrX 10503177 10509625 -156140671 - Lx6 LINE L1 -5 7455 800 1 665 1688 169 15 0 chrX 10509619 10509951 -156140345 + L1_Mur3 LINE L1 4875 5211 -669 1 665 918 232 107 8 chrX 10509955 10510216 -156140080 + Lx6 LINE L1 7160 7446 -14 1 665 6575 172 40 15 chrX 10510839 10512573 -156137723 - Lx4B LINE L1 0 7058 5270 1 665 761 190 5 52 chrX 10512574 10512768 -156137528 + Lx6 LINE L1 7248 7432 -28 1 665 297 0 0 0 chrX 10512899 10512932 -156137364 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1 665 288 328 0 16 chrX 10513094 10513221 -156137075 - L1M2 LINE L1 -702 5589 5465 1 665 32627 78 9 2 chrX 10513312 10519471 -156130825 - L1Md_F2 LINE L1 -12 6570 363 1 665 375 310 136 55 chrX 10519477 10519859 -156130437 - L1MEf LINE L1 -4681 1519 1107 1 665 21 0 0 0 chrX 10520107 10520128 -156130168 + AT_rich Low_complexity Low_complexity 1 21 0 2 665 252 0 0 0 chrX 10521349 10521377 -156128919 + (CAAAAA)n Simple_repeat Simple_repeat 1 28 0 2 665 709 316 51 40 chrX 10521885 10522221 -156128075 - ORR1E LTR MaLR -18 361 1 2 665 4673 113 33 22 chrX 10522247 10523067 -156127229 - Lx3C LINE L1 -721 5156 4328 2 665 6082 163 53 12 chrX 10523069 10524780 -156125516 + Lx3C LINE L1 5149 6958 -18 2 665 191 36 0 35 chrX 10524780 10524809 -156125487 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2 665 3362 5 39 0 chrX 10524931 10525312 -156124984 + MTA_Mm LTR MaLR 1 396 0 2 665 9271 25 13 0 chrX 10525312 10525996 -156124300 + MTA_Mm-int LTR MaLR 1 685 -413 2 665 261 0 0 0 chrX 10525996 10526025 -156124271 + (CAG)n Simple_repeat Simple_repeat 2 30 0 2 665 9271 25 13 0 chrX 10526025 10526424 -156123872 + MTA_Mm-int LTR MaLR 686 1096 -2 2 665 3373 5 39 0 chrX 10526424 10526805 -156123491 + MTA_Mm LTR MaLR 1 396 0 2 665 35070 26 2 7 chrX 10527261 10532264 -156118032 + L1Md_T LINE L1 397 5586 -297 2 665 8438 35 0 0 chrX 10532264 10533260 -156117036 + L1Md_T LINE L1 5587 6582 0 2 665 23 0 0 0 chrX 10533260 10533283 -156117013 + AT_rich Low_complexity Low_complexity 1 23 0 2 665 455 48 0 16 chrX 10533325 10533388 -156116908 + (TA)n Simple_repeat Simple_repeat 1 62 0 2 665 224 343 155 14 chrX 10533628 10533847 -156116449 + L2c LINE L2 2926 3175 -212 3 665 236 185 12 47 chrX 10533983 10534068 -156116228 + Lx4B LINE L1 6970 7051 -7 3 665 378 314 11 23 chrX 10534394 10534570 -156115726 + L1MA4A LINE L1 5791 5964 -348 3 665 1223 280 50 18 chrX 10534737 10535079 -156115217 - MTEa LTR MaLR -26 353 1 3 665 260 115 39 0 chrX 10535137 10535189 -156115107 - Lx9 LINE L1 -193 7451 7398 3 665 5542 223 88 12 chrX 10535222 10536808 -156113488 - Lx9 LINE L1 -365 7279 5513 3 665 2222 191 25 2 chrX 10536845 10537250 -156113046 - MTC LTR MaLR 0 421 8 3 665 288 0 0 0 chrX 10537315 10537347 -156112949 + (GA)n Simple_repeat Simple_repeat 1 32 0 3 665 486 283 22 0 chrX 10537361 10537453 -156112843 - RSINE1 SINE B4 -18 147 54 3 665 474 252 134 69 chrX 10537576 10537742 -156112554 - Kanga1 DNA Tc2 -193 1552 1375 3 665 1424 71 0 0 chrX 10537742 10537925 -156112371 - L1Md_T LINE L1 0 6582 6400 3 665 474 252 134 69 chrX 10537925 10538005 -156112291 - Kanga1 DNA Tc2 -371 1374 1290 3 665 1739 305 67 41 chrX 10538022 10538067 -156112229 - Kanga1 DNA Tc2 -1030 715 674 3 665 699 316 39 28 chrX 10538067 10538350 -156111946 + B4A SINE B4 1 286 -6 4 665 1739 305 67 41 chrX 10538350 10538913 -156111383 - Kanga1 DNA Tc2 -1072 673 91 3 665 230 109 43 0 chrX 10541406 10541452 -156108844 + A-rich Low_complexity Low_complexity 3 50 0 4 665 1343 241 146 2 chrX 10541458 10541932 -156108364 - L1MA5A LINE L1 -364 5933 5392 4 665 219 228 0 17 chrX 10541932 10541990 -156108306 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 665 1040 279 21 31 chrX 10541992 10542280 -156108016 - B4A SINE B4 -2 290 6 4 665 278 240 13 0 chrX 10542283 10542358 -156107938 - L1MA5A LINE L1 -913 5399 5324 4 665 33827 35 1 0 chrX 10542348 10548835 -156101461 + L1Md_T LINE L1 1 5589 -297 4 665 9008 4 0 4 chrX 10548835 10549835 -156100461 + L1Md_T LINE L1 5590 6585 0 4 665 1155 274 93 12 chrX 10549838 10550429 -156099867 - L1MA5A LINE L1 -795 5348 4710 4 665 398 330 165 42 chrX 10550564 10550849 -156099447 - MLT1G1 LTR MaLR -257 322 3 4 665 1176 158 77 0 chrX 10551479 10551688 -156098608 - URR1B DNA MER1_type 0 225 1 4 665 196 363 65 21 chrX 10552278 10552371 -156097925 - MIR3 SINE MIR -103 105 9 4 665 545 0 15 0 chrX 10552544 10552609 -156097687 + (TC)n Simple_repeat Simple_repeat 1 66 0 4 665 1256 67 6 0 chrX 10552807 10552971 -156097325 + B2_Mm1t SINE B2 1 165 -28 5 665 360 143 100 0 chrX 10553318 10553388 -156096908 + HAL1-3A_ME LINE L1 1975 2051 -807 5 665 189 74 0 0 chrX 10553588 10553615 -156096681 + (CCAA)n Simple_repeat Simple_repeat 2 28 0 5 665 4504 65 15 0 chrX 10554246 10554829 -156095467 - L1Md_F2 LINE L1 0 6582 5991 5 665 1179 62 0 0 chrX 10555885 10556031 -156094265 + B1_Mus1 SINE Alu 1 146 -2 5 665 197 183 70 20 chrX 10556074 10556131 -156094165 + MIRm SINE MIR 207 274 -2 5 665 257 159 93 47 chrX 10556527 10556613 -156093683 + Lx4B LINE L1 6969 7058 0 5 665 362 457 58 12 chrX 10556975 10557037 -156093259 - MER115 DNA Tip100 -200 493 429 5 665 549 0 0 0 chrX 10557037 10557098 -156093198 + (TC)n Simple_repeat Simple_repeat 2 62 0 5 665 362 457 58 12 chrX 10557098 10557294 -156093002 - MER115 DNA Tip100 -265 428 224 5 665 240 35 0 0 chrX 10557531 10557560 -156092736 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 665 287 362 100 52 chrX 10557946 10558068 -156092228 + LTR16C LTR ERVL 228 372 -117 6 665 459 0 0 0 chrX 10558068 10558119 -156092177 + (TC)n Simple_repeat Simple_repeat 2 52 0 6 665 287 362 100 52 chrX 10558119 10558226 -156092070 + LTR16C LTR ERVL 373 467 -22 6 665 677 176 88 0 chrX 10558248 10558373 -156091923 - B1_Mur4 SINE Alu -13 137 2 6 665 210 306 0 0 chrX 10559884 10559933 -156090363 - MIRm SINE MIR -203 73 25 6 665 198 192 0 0 chrX 10560190 10560242 -156090054 + (ATG)n Simple_repeat Simple_repeat 2 53 0 6 665 24 0 0 0 chrX 10562097 10562121 -156088175 + AT_rich Low_complexity Low_complexity 1 24 0 6 665 1803 237 46 56 chrX 10562134 10562656 -156087640 - RLTR17 LTR ERVK -71 621 105 6 665 652 290 74 45 chrX 10563075 10563277 -156087019 + Tigger7 DNA MER2_type 1 208 -2283 6 665 1004 276 104 40 chrX 10563288 10563642 -156086654 + MTEb LTR MaLR 1 377 -2 6 665 303 300 56 0 chrX 10563642 10563729 -156086567 + Tigger7 DNA MER2_type 219 310 -2181 6 665 266 248 43 34 chrX 10563711 10563828 -156086468 + Tigger7 DNA MER2_type 2271 2388 -103 6 665 634 227 0 0 chrX 10563911 10564021 -156086275 - B3 SINE B2 -106 110 1 6 665 305 291 51 0 chrX 10564189 10564306 -156085990 - L1MC4 LINE L1 -1 8041 7919 7 665 180 0 0 0 chrX 10564308 10564328 -156085968 + (TC)n Simple_repeat Simple_repeat 1 20 0 7 665 753 0 0 106 chrX 10564638 10564836 -156085460 + (TTC)n Simple_repeat Simple_repeat 1 177 0 7 665 589 158 21 14 chrX 10564838 10564979 -156085317 + CT-rich Low_complexity Low_complexity 6 147 0 7 665 799 77 13 182 chrX 10564979 10565138 -156085158 - B1_Mm SINE Alu -14 133 2 7 665 185 339 32 87 chrX 10565198 10565324 -156084972 + L2a LINE L2 3308 3426 0 7 665 1030 307 17 53 chrX 10565452 10565813 -156084483 - ORR1E LTR MaLR -10 349 2 7 665 2898 206 135 44 chrX 10566149 10566970 -156083326 - RMER19B LTR ERVK -6 896 1 7 665 582 349 38 5 chrX 10568293 10568506 -156081790 - LTR16A LTR ERVL 0 451 232 7 665 421 286 216 22 chrX 10569138 10569360 -156080936 + B4A SINE B4 6 270 -22 7 665 218 219 31 0 chrX 10569382 10569446 -156080850 + (CA)n Simple_repeat Simple_repeat 1 66 0 8 665 294 305 106 56 chrX 10570702 10570862 -156079434 - MIR SINE MIR -70 192 25 8 665 299 355 97 77 chrX 10571003 10571393 -156078903 + MLT1A1 LTR MaLR 8 405 -3 8 665 342 143 0 0 chrX 10571992 10572055 -156078241 + (TG)n Simple_repeat Simple_repeat 2 64 0 8 665 370 297 16 48 chrX 10573065 10573189 -156077107 + RSINE1 SINE B4 1 120 -45 8 665 1851 208 50 17 chrX 10573301 10573703 -156076593 + MTD LTR MaLR 5 419 0 8 665 488 200 18 0 chrX 10573756 10573866 -156076430 - Lx7 LINE L1 0 7696 7585 8 665 471 18 0 0 chrX 10575009 10575065 -156075231 + (CA)n Simple_repeat Simple_repeat 1 56 0 8 665 233 392 34 58 chrX 10575776 10575982 -156074314 + MIR SINE MIR 43 243 -19 8 665 800 290 48 12 chrX 10576150 10576506 -156073790 + L1MD2 LINE L1 754 1119 -5521 8 665 412 356 0 6 chrX 10576708 10576869 -156073427 + RSINE1 SINE B4 4 163 -2 9 665 771 280 18 0 chrX 10576934 10577102 -156073194 - B3A SINE B2 -26 172 2 9 665 436 245 40 86 chrX 10577240 10577392 -156072904 + MTE2a LTR MaLR 235 379 0 9 665 414 39 0 0 chrX 10577459 10577511 -156072785 + (CATA)n Simple_repeat Simple_repeat 4 55 0 9 665 597 288 48 0 chrX 10577578 10577724 -156072572 + ID_B1 SINE B4 51 203 -21 9 665 330 332 104 28 chrX 10577752 10577963 -156072333 + L1MD2 LINE L1 1332 1558 -5082 8 665 227 264 164 49 chrX 10578123 10578306 -156071990 + L1MD2 LINE L1 1635 1838 -4802 8 665 260 400 27 18 chrX 10578532 10578644 -156071652 + PB1 SINE Alu 2 114 -13 9 665 506 297 149 63 chrX 10578667 10579162 -156071134 + L1MD2 LINE L1 2103 2640 -4000 8 665 682 254 0 0 chrX 10579231 10579369 -156070927 + B1F SINE Alu 10 147 -2 9 665 256 143 16 16 chrX 10579378 10579411 -156070885 + (TAA)n Simple_repeat Simple_repeat 3 35 0 9 665 1204 56 0 0 chrX 10579411 10579553 -156070743 + B1_Mus1 SINE Alu 1 142 -6 9 665 256 143 16 16 chrX 10579553 10579583 -156070713 + (TAA)n Simple_repeat Simple_repeat 3 32 0 9 665 258 279 93 22 chrX 10579588 10579771 -156070525 + L1MD2 LINE L1 2698 2893 -3651 8 665 849 265 20 0 chrX 10579772 10579976 -156070320 + B3 SINE B2 1 208 -8 1 665 697 304 85 37 chrX 10580030 10580651 -156069645 + L1MD2 LINE L1 3210 3875 -2669 8 665 1196 54 7 0 chrX 10580651 10580798 -156069498 - B1_Mus1 SINE Alu 0 148 1 1 665 697 304 85 37 chrX 10580798 10581022 -156069274 + L1MD2 LINE L1 3876 4096 -2448 8 665 1589 192 132 3 chrX 10581225 10581596 -156068700 + MTD LTR MaLR 1 419 0 1 665 237 271 47 12 chrX 10581739 10581825 -156068471 + MLT1A0 LTR MaLR 259 347 -18 1 665 485 320 42 18 chrX 10581878 10582212 -156068084 + L1MC LINE L1 3733 4074 -2072 1 665 613 204 7 7 chrX 10582220 10582373 -156067923 + (TA)n Simple_repeat Simple_repeat 1 153 0 1 665 202 42 0 0 chrX 10582373 10582397 -156067899 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 665 1126 114 0 0 chrX 10582397 10582555 -156067741 - B2_Mm2 SINE B2 -37 158 1 1 665 4431 249 98 53 chrX 10582564 10583729 -156066567 + L1M4c LINE L1 202 1454 -4930 1 665 1618 90 16 20 chrX 10583729 10583978 -156066318 + Lx3_Mus LINE L1 6762 7009 0 1 665 4431 249 98 53 chrX 10583978 10584283 -156066013 + L1M4c LINE L1 1455 1760 -4624 1 665 728 197 197 0 chrX 10584283 10584471 -156065825 - URR1B DNA MER1_type 0 225 1 1 665 4431 249 98 53 chrX 10584471 10585139 -156065157 + L1M4c LINE L1 1761 2437 -3947 1 665 396 319 88 7 chrX 10585160 10585296 -156065000 - B1F SINE Alu 0 149 3 1 665 13433 159 41 23 chrX 10585337 10587530 -156062766 - Lx2B LINE L1 -10 6990 4729 1 665 351 0 0 0 chrX 10587530 10587569 -156062727 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 665 13433 142 35 30 chrX 10587569 10588042 -156062254 - Lx2B LINE L1 -1149 4728 4262 1 665 3277 38 5 5 chrX 10588042 10588438 -156061858 - MTA_Mm LTR MaLR 0 396 1 1 665 13433 142 35 30 chrX 10588438 10589475 -156060821 - Lx2B LINE L1 -1616 4261 3233 1 665 538 289 95 14 chrX 10589508 10589940 -156060356 + L1MB2 LINE L1 2237 2703 -3443 1 665 282 106 0 0 chrX 10589954 10590001 -156060295 + (TTAG)n Simple_repeat Simple_repeat 3 49 0 1 665 1632 250 52 3 chrX 10590001 10590386 -156059910 + MTD LTR MaLR 14 417 -2 1 665 724 282 38 9 chrX 10590392 10590707 -156059589 + L1MB2 LINE L1 2710 3033 -3113 1 665 1194 286 64 64 chrX 10590725 10591324 -156058972 + L1MB2 LINE L1 4169 4761 -1379 1 665 1147 88 0 0 chrX 10591324 10591471 -156058825 + B1_Mus2 SINE Alu 1 147 0 1 665 1194 286 64 64 chrX 10591471 10591730 -156058566 + L1MB2 LINE L1 4762 5027 -1113 1 665 889 260 25 14 chrX 10591852 10592137 -156058159 + L1MB2 LINE L1 5335 5622 -561 1 665 1059 281 104 45 chrX 10592138 10592514 -156057782 - MTD LTR MaLR 0 419 22 1 665 721 290 60 17 chrX 10592536 10592834 -156057462 + L1MB2 LINE L1 5612 5922 -249 1 665 338 229 276 0 chrX 10593172 10593277 -156057019 - MER5A1 DNA MER1_type -32 134 1 1 665 2383 91 69 44 chrX 10593369 10593758 -156056538 - Lx LINE L1 -7 6647 6249 1 665 284 64 0 21 chrX 10594078 10594126 -156056170 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 1 665 317 268 13 3 chrX 10595001 10595100 -156055196 - MTEb LTR MaLR 0 379 281 1 665 212 115 18 55 chrX 10595167 10595222 -156055074 + A-rich Low_complexity Low_complexity 3 55 0 1 665 23 33 0 0 chrX 10596327 10596357 -156053939 + AT_rich Low_complexity Low_complexity 1 30 0 1 665 270 329 141 59 chrX 10596748 10597174 -156053122 + Lx8 LINE L1 7011 7471 -2 1 665 659 298 93 14 chrX 10598879 10599385 -156050911 + L1MDb LINE L1 1057 1625 -5008 1 665 3330 179 92 4 chrX 10599443 10600184 -156050112 + Lx2B LINE L1 6183 6988 -12 1 665 249 174 14 28 chrX 10600513 10600584 -156049712 + GA-rich Low_complexity Low_complexity 5 74 0 1 665 405 71 14 28 chrX 10600567 10600639 -156049657 + (GGGGA)n Simple_repeat Simple_repeat 3 73 0 1 665 318 281 83 38 chrX 10600687 10600820 -156049476 + L1MDb LINE L1 1958 2096 -4537 1 665 319 336 17 8 chrX 10600848 10600968 -156049328 - L1M4c LINE L1 -2065 4314 4194 1 665 434 287 60 18 chrX 10601071 10601238 -156049058 - L1M4c LINE L1 -2333 4043 3870 1 665 248 177 135 78 chrX 10601275 10601416 -156048880 - L1M4c LINE L1 -2869 3513 3365 1 665 233 270 0 0 chrX 10601565 10601628 -156048668 + L1_Mur3 LINE L1 5395 5457 -423 1 665 1097 262 57 20 chrX 10601630 10602085 -156048211 - L1M4c LINE L1 -3167 3209 2738 1 665 301 160 0 26 chrX 10602294 10602371 -156047925 - Lx7 LINE L1 0 7696 7622 1 665 474 75 0 0 chrX 10602441 10602508 -156047788 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 665 318 26 0 0 chrX 10602516 10602555 -156047741 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 1 665 1187 276 62 28 chrX 10602559 10603024 -156047272 - Lx7 LINE L1 -387 7309 6829 1 665 3279 23 0 0 chrX 10603022 10603420 -156046876 + L1Md_A LINE L1 5189 5586 -297 1 665 8455 33 0 0 chrX 10603420 10604416 -156045880 + L1Md_A LINE L1 5587 6582 0 1 665 607 274 6 11 chrX 10604423 10604600 -156045696 - Lx7 LINE L1 -858 6838 6663 1 665 934 289 132 26 chrX 10604622 10606084 -156044212 - L1M4c LINE L1 -3678 2698 1218 1 665 2576 269 88 26 chrX 10606366 10607196 -156043100 - Lx8 LINE L1 -216 7257 6377 1 665 306 50 0 0 chrX 10607414 10607454 -156042842 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 665 714 24 0 0 chrX 10607467 10607551 -156042745 + (GAA)n Simple_repeat Simple_repeat 2 85 0 1 665 316 296 30 10 chrX 10608296 10608395 -156041901 + ID_B1 SINE B4 3 103 -121 1 665 391 262 94 104 chrX 10608672 10608864 -156041432 - B3 SINE B2 -5 190 1 1 665 4676 52 3 0 chrX 10608896 10609473 -156040823 - L1Md_F2 LINE L1 -14 6568 5990 1 665 1777 57 8 35 chrX 10609473 10609730 -156040566 + L1Md_F3 LINE L1 6335 6584 0 1 665 27245 77 45 6 chrX 10609730 10614957 -156035339 - L1Md_F2 LINE L1 -580 6004 631 1 665 383 261 2 16 chrX 10614990 10615104 -156035192 - MLT1H LTR MaLR -390 159 6 1 665 484 331 61 16 chrX 10615833 10616079 -156034217 - MIR SINE MIR 0 262 6 1 666 470 17 17 0 chrX 10617241 10617300 -156032996 + (TC)n Simple_repeat Simple_repeat 2 61 0 1 666 369 0 0 0 chrX 10617300 10617340 -156032956 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 666 24 0 0 0 chrX 10618618 10618642 -156031654 + AT_rich Low_complexity Low_complexity 1 24 0 1 666 530 280 7 26 chrX 10618714 10618868 -156031428 - RSINE1 SINE B4 -13 152 2 1 666 314 266 41 54 chrX 10619112 10619259 -156031037 + L1M5 LINE L1 5546 5690 -434 1 666 240 237 82 51 chrX 10619806 10619904 -156030392 + L1M5 LINE L1 5415 5515 -725 1 666 226 50 0 48 chrX 10620976 10621018 -156029278 + (TTTTTG)n Simple_repeat Simple_repeat 6 45 0 1 666 482 263 42 111 chrX 10621832 10622209 -156028087 - RMER17C LTR ERVK -59 351 1 1 666 1167 55 14 0 chrX 10622883 10623028 -156027268 + B1_Mus2 SINE Alu 1 147 0 1 666 243 0 0 0 chrX 10623036 10623063 -156027233 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 666 3442 58 165 18 chrX 10623442 10623934 -156026362 - LTRIS2 LTR ERV1 0 564 1 1 666 351 0 0 0 chrX 10624253 10624292 -156026004 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 666 423 0 0 0 chrX 10624292 10624338 -156025958 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 666 435 38 0 0 chrX 10625055 10625108 -156025188 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 666 463 237 15 7 chrX 10625276 10625412 -156024884 + L1MB7 LINE L1 6048 6184 0 1 666 473 316 59 35 chrX 10625572 10625775 -156024521 - Charlie17a DNA MER1_type -10 209 2 1 666 321 140 0 0 chrX 10626503 10626560 -156023736 + (GAGAA)n Simple_repeat Simple_repeat 5 61 0 1 666 187 235 247 0 chrX 10627354 10627435 -156022861 + MIRb SINE MIR 45 145 -123 1 666 396 307 31 78 chrX 10627544 10627735 -156022561 + B3A SINE B2 1 182 -16 1 666 469 270 96 37 chrX 10627842 10628125 -156022171 - MLT1A1 LTR MaLR -8 400 44 1 666 28755 105 52 16 chrX 10628132 10629395 -156020901 + L1Md_F2 LINE L1 390 1966 -3917 1 666 216 0 0 0 chrX 10629395 10629419 -156020877 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 666 28755 80 78 1 chrX 10629419 10633028 -156017268 + L1Md_F2 LINE L1 1967 5584 -299 1 666 7482 82 3 8 chrX 10633029 10634029 -156016267 + L1Md_F2 LINE L1 5587 6581 -1 1 666 2852 205 28 21 chrX 10634116 10634688 -156015608 + Lx5 LINE L1 6475 7050 0 1 666 181 340 68 48 chrX 10636031 10636238 -156014058 - L2c LINE L2 -102 3285 3075 1 666 411 297 17 0 chrX 10636435 10636553 -156013743 - MER2 DNA MER2_type -16 329 210 1 666 296 198 9 38 chrX 10636711 10636791 -156013505 + (TA)n Simple_repeat Simple_repeat 2 80 0 1 666 375 23 0 0 chrX 10636791 10636835 -156013461 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 666 296 198 9 38 chrX 10636835 10636845 -156013451 + (TA)n Simple_repeat Simple_repeat 2 11 0 1 666 2984 72 5 23 chrX 10636845 10637244 -156013052 + MTA_Mm LTR MaLR 2 393 -3 1 666 261 0 0 0 chrX 10637244 10637273 -156013023 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 666 296 198 9 38 chrX 10637273 10637285 -156013011 + (TA)n Simple_repeat Simple_repeat 1 11 0 1 666 334 225 88 26 chrX 10637315 10637429 -156012867 - MER2 DNA MER2_type -124 221 101 1 666 445 302 122 42 chrX 10637551 10637904 -156012392 - L1ME5 LINE L1 -247 5947 5567 1 666 201 352 139 43 chrX 10637948 10638251 -156012045 - L2a LINE L2 -42 3384 3053 1 666 505 290 54 88 chrX 10639022 10639452 -156010844 + L1M5 LINE L1 5381 5797 -327 1 666 477 50 0 0 chrX 10640297 10640357 -156009939 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 666 867 249 118 52 chrX 10640418 10640799 -156009497 + L1ME2z LINE L1 5463 5868 -576 1 666 413 288 26 18 chrX 10640806 10640919 -156009377 + Lx7 LINE L1 5594 5707 -1989 1 666 180 97 0 0 chrX 10640925 10640956 -156009340 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 666 702 55 0 0 chrX 10640956 10641046 -156009250 + (GA)n Simple_repeat Simple_repeat 2 92 0 1 666 306 0 0 0 chrX 10641451 10641485 -156008811 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 1 666 288 226 92 3 chrX 10641487 10641616 -156008680 + L1ME2z LINE L1 5860 5995 -449 1 666 261 241 0 17 chrX 10641711 10641770 -156008526 - MLT1B LTR MaLR -291 99 42 1 666 202 70 93 0 chrX 10642039 10642082 -156008214 + (CAGAGA)n Simple_repeat Simple_repeat 1 47 0 1 666 819 0 0 0 chrX 10642102 10642193 -156008103 + (GGAGA)n Simple_repeat Simple_repeat 1 91 0 1 666 192 392 0 0 chrX 10642193 10642267 -156008029 - MIR SINE MIR -162 100 27 1 666 300 294 59 0 chrX 10642437 10642522 -156007774 - B1F SINE Alu -16 133 44 1 666 627 287 103 79 chrX 10642764 10643218 -156007078 - MLT1C LTR MaLR -2 465 1 1 666 960 298 56 42 chrX 10643257 10643705 -156006591 - L1ME3A LINE L1 -287 5886 5433 1 666 34680 87 15 4 chrX 10644476 10650790 -155999506 - L1Md_F2 LINE L1 -1 6581 195 1 666 794 164 0 22 chrX 10651161 10651298 -155998998 + B1_Mus1 SINE Alu 9 142 -6 1 666 564 15 0 0 chrX 10651660 10651725 -155998571 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 666 428 289 127 36 chrX 10651725 10651890 -155998406 - B3A SINE B2 -18 180 1 1 666 305 292 92 8 chrX 10651925 10652056 -155998240 + MLT1H2 LTR MaLR 59 200 -289 1 666 180 0 0 0 chrX 10652392 10652412 -155997884 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 666 438 152 12 12 chrX 10652412 10652492 -155997804 - B1_Mur2 SINE Alu -13 136 57 2 666 828 74 0 0 chrX 10652616 10652737 -155997559 + (TC)n Simple_repeat Simple_repeat 2 122 0 2 666 470 242 30 0 chrX 10652757 10652856 -155997440 - RSINE1 SINE B4 -31 134 33 2 666 1756 176 65 27 chrX 10653045 10653413 -155996883 + Lx2A1 LINE L1 6624 7005 -3 2 666 251 309 18 121 chrX 10653669 10653907 -155996389 + MIRb SINE MIR 9 231 -37 2 666 232 247 38 25 chrX 10653908 10653987 -155996309 - MLT1L LTR MaLR -8 602 523 2 666 199 169 16 48 chrX 10654079 10654141 -155996155 + CT-rich Low_complexity Low_complexity 3 62 0 2 666 236 369 25 18 chrX 10654863 10655026 -155995270 + MLT1B LTR MaLR 66 229 -161 2 666 2286 280 37 26 chrX 10655863 10656592 -155993704 - FordPrefect DNA Tip100 -6 1677 941 2 666 231 397 26 0 chrX 10656597 10656713 -155993583 + Lx8 LINE L1 7046 7164 -309 2 666 476 328 44 6 chrX 10656726 10656907 -155993389 + RMER15 LTR ERVL 376 563 -12 2 666 495 331 26 16 chrX 10657245 10657435 -155992861 - FordPrefect DNA Tip100 -732 951 760 2 666 273 295 30 69 chrX 10657609 10657740 -155992556 - FordPrefect DNA Tip100 -1390 293 168 2 666 232 319 99 0 chrX 10657832 10657923 -155992373 - FordPrefect DNA Tip100 -1530 153 54 2 666 250 250 83 33 chrX 10658415 10658535 -155991761 + Charlie4a DNA MER1_type 72 197 -311 2 666 256 314 20 0 chrX 10658576 10658678 -155991618 + Charlie4a DNA MER1_type 405 508 0 2 666 230 176 0 19 chrX 10658785 10658837 -155991459 + CT-rich Low_complexity Low_complexity 4 54 0 2 666 315 331 47 0 chrX 10659329 10659477 -155990819 - MIRb SINE MIR -107 161 2 2 666 381 288 38 71 chrX 10660308 10660491 -155989805 - RLTR42-int LTR ERVK -4172 1350 1174 2 666 1699 170 109 21 chrX 10660534 10660918 -155989378 - MTD LTR MaLR -1 418 1 2 666 218 204 19 0 chrX 10661345 10661399 -155988897 + CT-rich Low_complexity Low_complexity 2 56 0 2 666 1186 263 91 6 chrX 10661424 10661764 -155988532 - MTEa LTR MaLR 0 379 11 2 666 978 287 83 31 chrX 10661777 10662162 -155988134 - MTD LTR MaLR -14 405 1 2 666 289 309 142 83 chrX 10662205 10662494 -155987802 - LTR16A1 LTR ERVL -3 453 148 2 666 350 176 12 0 chrX 10663664 10663749 -155986547 + CT-rich Low_complexity Low_complexity 2 87 0 2 666 297 0 0 0 chrX 10663749 10663782 -155986514 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 666 286 250 42 59 chrX 10664386 10664505 -155985791 - MLT1B LTR MaLR -82 308 192 2 666 198 0 0 0 chrX 10664623 10664645 -155985651 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 666 1020 45 0 0 chrX 10664645 10664777 -155985519 - B1_Mus2 SINE Alu -9 138 7 2 666 368 213 8 0 chrX 10664887 10665009 -155985287 + GA-rich Low_complexity Low_complexity 1 123 0 2 666 180 0 0 0 chrX 10665398 10665418 -155984878 + (A)n Simple_repeat Simple_repeat 1 20 0 2 666 708 12 0 0 chrX 10665649 10665730 -155984566 + (TC)n Simple_repeat Simple_repeat 2 82 0 2 666 518 257 0 42 chrX 10666408 10666550 -155983746 + MIR SINE MIR 22 157 -105 2 666 403 248 8 32 chrX 10666630 10666755 -155983541 + ID_B1 SINE B4 103 224 0 2 666 306 197 82 0 chrX 10666762 10666823 -155983473 + ID4 SINE ID 4 69 -14 2 666 576 264 95 70 chrX 10667484 10667694 -155982602 - AmnSINE1 SINE SINE -110 465 255 2 666 321 26 0 0 chrX 10667694 10667732 -155982564 + (CAGG)n Simple_repeat Simple_repeat 4 41 0 2 666 576 264 95 70 chrX 10667732 10667794 -155982502 - AmnSINE1 SINE SINE -321 254 188 2 666 374 205 13 0 chrX 10668673 10668751 -155981545 + MIR SINE MIR 42 120 -88 2 666 215 205 0 0 chrX 10669000 10669039 -155981257 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 666 234 267 10 62 chrX 10669494 10669590 -155980706 + MTEb LTR MaLR 272 362 -17 2 666 1320 230 12 110 chrX 10669679 10670089 -155980207 + ORR1D2 LTR MaLR 1 370 0 2 666 363 298 69 60 chrX 10670093 10670134 -155980162 + ORR1D2-int LTR MaLR 1151 1191 -179 2 666 198 0 0 0 chrX 10670134 10670156 -155980140 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 666 363 298 69 60 chrX 10670156 10670258 -155980038 + ORR1D2-int LTR MaLR 1192 1299 -71 2 666 1134 48 14 7 chrX 10670258 10670393 -155979903 + B1_Mus1 SINE Alu 1 135 -13 2 666 277 22 43 22 chrX 10670393 10670439 -155979857 + (CAAA)n Simple_repeat Simple_repeat 1 47 0 2 666 363 298 69 60 chrX 10670449 10670522 -155979774 + ORR1D2-int LTR MaLR 1300 1369 -1 2 666 1241 262 66 20 chrX 10670523 10670873 -155979423 + ORR1D2 LTR MaLR 5 370 0 2 666 1592 79 70 0 chrX 10671455 10671682 -155978614 - L1_Mus1 LINE L1 0 6567 6325 2 666 267 221 169 0 chrX 10672176 10672253 -155978043 - L1M LINE L1 -454 5670 5581 2 666 304 241 9 69 chrX 10672366 10672482 -155977814 - L1M LINE L1 -755 5369 5261 2 666 200 336 27 55 chrX 10672913 10673023 -155977273 - MIR SINE MIR -78 130 24 2 666 192 315 22 11 chrX 10673908 10673998 -155976298 - L2 LINE L2 -1314 2105 2015 2 666 360 0 0 0 chrX 10674981 10675021 -155975275 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 666 185 263 23 126 chrX 10675229 10675316 -155974980 - MIRc SINE MIR -77 191 114 2 666 186 133 0 0 chrX 10675546 10675576 -155974720 + (GAGAA)n Simple_repeat Simple_repeat 1 30 0 2 666 183 308 0 0 chrX 10675996 10676048 -155974248 - L2c LINE L2 -2 3385 3334 2 666 226 345 9 41 chrX 10677838 10678054 -155972242 + CT-rich Low_complexity Low_complexity 1 209 0 2 666 306 283 47 8 chrX 10679400 10679528 -155970768 - MIRc SINE MIR -26 242 110 2 666 345 138 25 12 chrX 10679862 10679943 -155970353 + GA-rich Low_complexity Low_complexity 2 83 0 2 666 834 18 0 26 chrX 10679945 10680060 -155970236 + (CAGAGA)n Simple_repeat Simple_repeat 2 113 0 2 666 513 0 0 0 chrX 10680060 10680116 -155970180 + (GGGAGA)n Simple_repeat Simple_repeat 1 57 0 2 666 974 147 177 5 chrX 10681597 10681789 -155968507 - URR1B DNA MER1_type 0 225 1 2 666 189 0 0 0 chrX 10682458 10682479 -155967817 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2 666 295 255 27 81 chrX 10682844 10682955 -155967341 + RSINE1 SINE B4 16 120 -45 2 666 578 323 45 54 chrX 10684448 10684636 -155965660 - MER47B DNA MER2_type -167 251 61 2 666 1006 246 39 189 chrX 10684636 10684914 -155965382 - MTD LTR MaLR 0 419 210 2 666 1095 77 14 0 chrX 10684914 10685057 -155965239 - B1_Mm SINE Alu -2 145 1 2 666 1006 246 39 189 chrX 10685057 10685270 -155965026 - MTD LTR MaLR -210 209 2 2 666 578 323 45 54 chrX 10685270 10685323 -155964973 - MER47B DNA MER2_type -358 60 12 2 666 216 359 60 0 chrX 10685333 10685450 -155964846 + MER5A DNA MER1_type 29 152 -37 2 666 221 345 0 23 chrX 10686422 10686508 -155963788 - L2 LINE L2 -508 2911 2828 2 666 328 309 177 10 chrX 10686731 10686939 -155963357 - MLT1G3 LTR MaLR -119 476 226 2 666 1383 93 93 0 chrX 10687029 10687233 -155963063 - L1Md_F2 LINE L1 -12 6570 6348 2 666 287 261 14 0 chrX 10687838 10687907 -155962389 + AmnSINE1 SINE SINE 504 573 -2 2 666 314 333 8 42 chrX 10688320 10688439 -155961857 - PB1D10 SINE Alu -2 115 1 2 666 273 196 0 0 chrX 10688449 10688505 -155961791 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 666 195 336 38 46 chrX 10688854 10688985 -155961311 - MIRb SINE MIR -32 236 107 2 666 186 160 0 0 chrX 10689409 10689459 -155960837 + T-rich Low_complexity Low_complexity 1 50 0 2 666 1072 66 0 0 chrX 10689475 10689612 -155960684 - B1_Mus2 SINE Alu -10 137 1 2 666 323 347 16 39 chrX 10689612 10689741 -155960555 - MLT1G3 LTR MaLR -330 261 136 2 666 189 0 0 0 chrX 10689747 10689768 -155960528 + (CA)n Simple_repeat Simple_repeat 1 21 0 2 666 653 306 8 97 chrX 10689825 10690093 -155960203 + B4 SINE B4 49 292 0 2 666 1323 70 0 0 chrX 10690144 10690502 -155959794 + (GGGAGA)n Simple_repeat Simple_repeat 1 358 0 2 666 789 184 0 7 chrX 10691613 10691761 -155958535 - MTD LTR MaLR -268 151 5 2 666 2122 144 31 8 chrX 10692514 10692865 -155957431 + RLTR15 LTR ERVK 1 359 0 2 666 679 138 37 153 chrX 10692899 10693062 -155957234 - B1_Mus1 SINE Alu 0 148 5 2 666 183 80 0 0 chrX 10693231 10693256 -155957040 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2 666 774 248 12 0 chrX 10693258 10693419 -155956877 - Lx8 LINE L1 -143 7330 7168 2 666 2562 277 104 59 chrX 10693421 10693650 -155956646 - L1MD LINE L1 -1394 4752 4516 2 666 1692 128 257 6 chrX 10693650 10693965 -155956331 - ORR1B1 LTR MaLR 0 394 1 2 666 2562 277 104 59 chrX 10693965 10695801 -155954495 - L1MD LINE L1 -1631 4515 2593 2 666 334 208 158 0 chrX 10695820 10695921 -155954375 - Lx9 LINE L1 -8 7636 7520 2 666 186 103 0 0 chrX 10695927 10695956 -155954340 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 2 666 2251 224 159 3 chrX 10695960 10696538 -155953758 - Lx9 LINE L1 -180 7464 6797 2 666 562 305 63 49 chrX 10696606 10696645 -155953651 - L1MD2 LINE L1 -3513 3025 2986 2 666 5136 54 0 5 chrX 10696645 10697283 -155953013 - L1Md_F2 LINE L1 0 6582 5948 2 666 1043 282 43 50 chrX 10697283 10697861 -155952435 - L1MD2 LINE L1 -3553 2985 2407 2 666 340 270 57 17 chrX 10697840 10698017 -155952279 - L1MD3 LINE L1 -2 7993 7810 2 666 521 152 243 20 chrX 10698019 10698167 -155952129 - B2_Mm2 SINE B2 -14 181 1 2 666 275 293 114 50 chrX 10698228 10698771 -155951525 - L1MD2 LINE L1 -4204 2436 1859 2 666 183 80 59 20 chrX 10698780 10698831 -155951465 + T-rich Low_complexity Low_complexity 2 54 0 2 666 713 225 7 13 chrX 10698832 10698985 -155951311 + MTD LTR MaLR 13 164 -255 2 666 556 135 18 0 chrX 10699013 10699124 -155951172 + (TCTA)n Simple_repeat Simple_repeat 4 116 0 2 666 249 302 0 0 chrX 10699134 10699197 -155951099 - ID4_ SINE ID -16 67 5 2 666 273 328 8 39 chrX 10699233 10699360 -155950936 - ID_B1 SINE B4 -21 203 81 2 666 278 302 60 67 chrX 10699664 10699813 -155950483 + B1F SINE Alu 2 149 0 2 666 1220 91 62 17 chrX 10699982 10700160 -155950136 - B2_Mm2 SINE B2 -9 186 1 2 666 651 292 18 27 chrX 10700261 10700483 -155949813 - L1MD2 LINE L1 -5527 1020 801 2 666 378 339 106 2 chrX 10701166 10701519 -155948777 + L2a LINE L2 2731 3130 -296 2 666 1832 100 137 6 chrX 10701524 10701837 -155948459 - Lx LINE L1 -1 6653 6300 2 666 1943 111 0 4 chrX 10701837 10702103 -155948193 + Lx LINE L1 5880 6145 -509 2 666 25 31 0 0 chrX 10702180 10702212 -155948084 + AT_rich Low_complexity Low_complexity 1 32 0 2 666 190 352 0 22 chrX 10702212 10702302 -155947994 + L2a LINE L2 3291 3378 -9 2 666 2146 153 71 25 chrX 10702329 10702777 -155947519 - Lx9 LINE L1 -1 7643 7175 2 666 3110 213 26 11 chrX 10702779 10703400 -155946896 - Lx9 LINE L1 -659 6985 6356 2 666 588 29 0 0 chrX 10703679 10703749 -155946547 + (CTG)n Simple_repeat Simple_repeat 1 70 0 2 666 1124 279 139 10 chrX 10704511 10705022 -155945274 - L1ME2 LINE L1 -4 6160 5584 2 666 782 222 0 0 chrX 10705025 10705169 -155945127 + B1_Mur1 SINE Alu 1 144 -5 2 666 184 233 38 88 chrX 10705934 10706014 -155944282 - MIR SINE MIR -93 115 40 3 666 441 0 0 0 chrX 10706340 10706389 -155943907 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 666 204 179 0 0 chrX 10708149 10708188 -155942108 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 666 618 14 0 0 chrX 10708188 10708259 -155942037 + (GA)n Simple_repeat Simple_repeat 2 72 0 3 666 251 338 108 42 chrX 10708262 10708543 -155941753 - LTR81C LTR ERV1? -130 1263 831 3 666 421 358 97 64 chrX 10709120 10709576 -155940720 - LTR16E1 LTR ERVL 0 538 68 3 666 913 339 98 47 chrX 10710100 10710595 -155939701 + MLT1F2 LTR MaLR 25 654 0 3 666 494 234 106 7 chrX 10710905 10711047 -155939249 + MLT2B1 LTR ERVL 1 156 -364 3 666 972 285 110 3 chrX 10711383 10711665 -155938631 + MLT2B1 LTR ERVL 144 455 -65 3 666 3686 143 50 2 chrX 10711684 10712244 -155938052 - L1_Mur2 LINE L1 -20 5857 5287 3 666 243 0 0 0 chrX 10712244 10712271 -155938025 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3 666 3686 143 50 2 chrX 10712271 10712327 -155937969 - L1_Mur2 LINE L1 -591 5286 5212 3 666 6382 162 49 31 chrX 10712328 10713490 -155936806 + Lx5 LINE L1 5855 7037 -13 3 666 664 200 86 0 chrX 10713494 10713634 -155936662 + B3 SINE B2 59 210 -6 3 666 297 226 17 9 chrX 10714422 10714538 -155935758 + GA-rich Low_complexity Low_complexity 2 118 0 3 666 246 160 0 0 chrX 10715281 10715331 -155934965 + CT-rich Low_complexity Low_complexity 3 52 0 3 666 288 77 0 0 chrX 10715404 10715443 -155934853 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 666 567 287 0 0 chrX 10715457 10715593 -155934703 - RSINE1 SINE B4 -21 144 9 3 666 403 248 73 24 chrX 10717058 10717182 -155933114 + LTR16A LTR ERVL 46 175 -276 3 666 416 319 37 105 chrX 10717334 10717769 -155932527 - LTR33A LTR ERVL -100 420 37 3 666 415 301 36 12 chrX 10717866 10718034 -155932262 + MLT1F2 LTR MaLR 389 560 0 3 666 250 268 0 0 chrX 10718431 10718487 -155931809 - MER96B DNA hAT -24 393 338 3 666 934 241 10 5 chrX 10718488 10718692 -155931604 + B3 SINE B2 2 206 -10 3 666 314 242 23 53 chrX 10718692 10718823 -155931473 + MER96B DNA hAT 49 175 -242 3 666 1454 264 19 37 chrX 10719468 10719845 -155930451 + ORR1D2 LTR MaLR 1 370 0 3 666 259 279 71 65 chrX 10720248 10720417 -155929879 + MIR SINE MIR 33 202 -60 3 666 239 290 76 61 chrX 10721183 10721315 -155928981 + MLT1G LTR MaLR 27 160 -431 3 666 323 310 49 49 chrX 10721571 10721693 -155928603 + MLT1G LTR MaLR 415 536 -55 3 666 251 242 45 15 chrX 10721864 10721931 -155928365 + RMER30 DNA MER1_type 11 79 -123 3 666 38929 14 1 7 chrX 10721931 10727711 -155922585 + L1Md_A LINE L1 1 5586 -297 3 666 9012 12 0 0 chrX 10727711 10728707 -155921589 + L1Md_A LINE L1 5587 6582 0 3 666 428 252 35 56 chrX 10728717 10728860 -155921436 + RMER30 DNA MER1_type 62 201 -1 3 666 349 337 105 20 chrX 10729085 10729524 -155920772 - Charlie4a DNA MER1_type -32 476 1 3 666 266 341 1 0 chrX 10729586 10729696 -155920600 - MLT1C LTR MaLR -8 497 366 3 666 420 20 0 0 chrX 10729881 10729930 -155920366 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 666 251 284 169 47 chrX 10729943 10730091 -155920205 - MLT1C LTR MaLR -339 166 1 3 666 661 281 22 22 chrX 10730391 10730573 -155919723 + B3A SINE B2 8 189 -9 3 666 504 190 30 0 chrX 10730745 10730845 -155919451 + MLT1A0 LTR MaLR 246 348 -17 3 666 402 274 42 8 chrX 10731257 10731375 -155918921 - ORR1E LTR MaLR -235 124 3 3 666 710 247 36 21 chrX 10731428 10731622 -155918674 - B3A SINE B2 0 198 2 3 666 452 99 14 0 chrX 10731833 10731904 -155918392 + (TC)n Simple_repeat Simple_repeat 1 72 0 3 666 360 0 0 0 chrX 10731904 10731944 -155918352 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 666 758 291 41 82 chrX 10731944 10732394 -155917902 - MT2B LTR ERVL -65 536 1 3 666 576 317 33 0 chrX 10732729 10732909 -155917387 - B3A SINE B2 -10 188 3 3 666 937 330 56 29 chrX 10733422 10733869 -155916427 - LTR16C LTR ERVL -30 459 1 3 666 250 343 78 55 chrX 10733889 10734145 -155916151 - LTR82A LTR ERVL -578 294 33 3 666 192 152 0 0 chrX 10734374 10734407 -155915889 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 3 666 413 199 43 0 chrX 10734419 10734580 -155915716 + GA-rich Low_complexity Low_complexity 2 169 0 3 666 2562 169 95 60 chrX 10734583 10735181 -155915115 + RMER19B LTR ERVK 1 619 -283 3 666 880 107 75 29 chrX 10735179 10735353 -155914943 + RMER19B LTR ERVK 721 902 0 3 666 857 165 0 6 chrX 10736013 10736178 -155914118 + GA-rich Low_complexity Low_complexity 1 164 0 3 666 3289 33 13 0 chrX 10736520 10736911 -155913385 - MTA_Mm LTR MaLR 0 396 1 3 666 220 331 55 55 chrX 10737721 10737849 -155912447 + L2c LINE L2 3260 3387 0 3 666 482 276 188 37 chrX 10738344 10738781 -155911515 + MLT1D LTR MaLR 1 503 -2 3 666 366 239 0 0 chrX 10739351 10739443 -155910853 + CT-rich Low_complexity Low_complexity 1 92 0 3 666 537 306 89 68 chrX 10739495 10740019 -155910277 + LTR16E1 LTR ERVL 5 568 0 3 666 338 374 19 15 chrX 10740563 10740769 -155909527 - MLT1E1A LTR MaLR -2 678 472 3 666 225 270 63 0 chrX 10740826 10740889 -155909407 - MLT1E1A LTR MaLR -360 293 227 3 666 891 275 120 9 chrX 10741180 10741521 -155908775 - MTE2b LTR MaLR 0 379 1 3 666 2722 128 47 10 chrX 10741640 10742129 -155908167 + RMER6A LTR ERVK 1 507 -249 3 666 1303 81 35 0 chrX 10742129 10742302 -155907994 + B2_Mm1t SINE B2 1 179 -14 3 666 396 0 0 0 chrX 10742389 10742433 -155907863 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 3 666 450 0 0 0 chrX 10742438 10742488 -155907808 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 666 1135 199 8 19 chrX 10742488 10742745 -155907551 + RMER6A LTR ERVK 503 756 0 3 666 419 306 60 26 chrX 10742939 10743090 -155907206 - MLT1C LTR MaLR -2 465 310 3 666 459 288 109 23 chrX 10743540 10743760 -155906536 - RMER15 LTR ERVL 0 575 337 3 666 1435 141 149 177 chrX 10743861 10744250 -155906046 + ORR1C1 LTR MaLR 1 378 0 3 666 256 246 15 0 chrX 10744443 10744508 -155905788 + L2b LINE L2 3310 3375 0 3 666 2205 151 32 13 chrX 10745694 10746071 -155904225 - ORR1C2 LTR MaLR 0 384 1 3 666 341 380 36 12 chrX 10746364 10746532 -155903764 - MLT1A LTR MaLR -383 172 1 3 666 1221 235 82 40 chrX 10746614 10746968 -155903328 - MTD LTR MaLR 0 419 51 3 666 233 328 32 16 chrX 10747524 10747648 -155902648 - LTR88c LTR Genie? -35 827 702 3 667 293 358 78 6 chrX 10748138 10748318 -155901978 + MIR SINE MIR 59 251 -11 3 667 208 302 82 49 chrX 10748561 10748683 -155901613 - MIRb SINE MIR -6 262 137 3 667 422 192 13 0 chrX 10748689 10748767 -155901529 - MLT1A LTR MaLR -5 369 291 3 667 379 368 6 38 chrX 10748776 10748934 -155901362 - MLT1A-int LTR MaLR -269 1102 950 3 667 275 289 26 0 chrX 10749067 10749143 -155901153 - MLT-int LTR MaLR -972 763 686 3 667 259 330 173 10 chrX 10749257 10749377 -155900919 - MLT1A-int LTR MaLR -637 734 613 3 667 501 17 0 0 chrX 10749377 10749435 -155900861 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 667 259 330 173 10 chrX 10749435 10749516 -155900780 - MLT1A-int LTR MaLR -759 612 502 3 667 2966 76 36 5 chrX 10749729 10750113 -155900183 + MTA_Mm LTR MaLR 1 396 0 3 667 3004 58 0 5 chrX 10750113 10750532 -155899764 + MTA_Mm-int LTR MaLR 1 417 -681 3 667 1536 31 5 0 chrX 10750526 10750720 -155899576 + MTB LTR MaLR 206 400 0 3 667 750 316 59 3 chrX 10751029 10751370 -155898926 - MLT1A-int LTR MaLR -870 501 1 3 667 585 308 82 77 chrX 10751374 10751646 -155898650 - MLT1A LTR MaLR -4 370 94 3 667 2097 189 3 3 chrX 10751646 10752013 -155898283 - ORR1B2 LTR MaLR 0 367 1 3 667 585 308 82 77 chrX 10752013 10752106 -155898190 - MLT1A LTR MaLR -281 93 3 3 667 270 0 0 0 chrX 10752575 10752605 -155897691 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 3 667 366 303 75 43 chrX 10752861 10753036 -155897260 - MLT1H LTR MaLR -324 225 46 3 667 3208 47 47 0 chrX 10753439 10753843 -155896453 - L1Md_F2 LINE L1 -3 6579 6157 3 667 399 327 133 84 chrX 10753907 10754254 -155896042 + ORR1D2 LTR MaLR 7 370 0 3 667 973 281 18 25 chrX 10754923 10755207 -155895089 + B4A SINE B4 11 292 0 3 667 220 354 79 58 chrX 10755268 10755457 -155894839 - MIR SINE MIR -6 256 64 3 667 1405 169 0 0 chrX 10756087 10756312 -155893984 + URR1B DNA MER1_type 1 225 0 3 667 1058 61 31 0 chrX 10756611 10756774 -155893522 + (TAGA)n Simple_repeat Simple_repeat 2 169 0 3 667 477 0 0 0 chrX 10757301 10757354 -155892942 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 667 447 324 107 38 chrX 10759327 10759616 -155890680 - LTR16C LTR ERVL -2 487 179 3 667 528 186 62 31 chrX 10760659 10760787 -155889509 + MER5A1 DNA MER1_type 3 134 -32 3 667 1122 69 14 0 chrX 10764280 10764424 -155885872 + B1_Mm SINE Alu 2 147 0 3 667 282 116 0 0 chrX 10764424 10764467 -155885829 + (A)n Simple_repeat Simple_repeat 1 43 0 3 667 748 287 89 19 chrX 10764531 10764801 -155885495 - B4A SINE B4 -3 289 1 3 667 462 300 66 16 chrX 10765671 10765854 -155884442 - ORR1E LTR MaLR -167 192 1 3 667 360 0 0 0 chrX 10766434 10766474 -155883822 + (TAAAAA)n Simple_repeat Simple_repeat 2 41 0 3 667 540 30 0 0 chrX 10766635 10766701 -155883595 + (TG)n Simple_repeat Simple_repeat 2 67 0 3 667 343 306 153 18 chrX 10767222 10767385 -155882911 + MIR SINE MIR 18 202 -60 3 667 571 294 189 4 chrX 10768586 10768845 -155881451 - MLT1G LTR MaLR 0 591 285 3 667 413 50 62 0 chrX 10768891 10768971 -155881325 + (CAAA)n Simple_repeat Simple_repeat 2 86 0 3 667 336 328 15 15 chrX 10768976 10769106 -155881190 - MLT1G LTR MaLR -330 249 120 3 667 256 307 52 13 chrX 10769373 10769528 -155880768 + MIR SINE MIR 92 252 -10 3 667 185 313 162 24 chrX 10769669 10769836 -155880460 - MIRc SINE MIR -26 242 53 3 667 319 280 120 74 chrX 10770264 10770413 -155879883 + RSINE1 SINE B4 1 158 -7 3 667 770 230 51 110 chrX 10770874 10771128 -155879168 + MTEa LTR MaLR 141 379 0 3 667 802 255 38 14 chrX 10773366 10773577 -155876719 - B3 SINE B2 0 216 1 3 667 303 299 95 27 chrX 10774351 10774499 -155875797 - ORR1E LTR MaLR -162 197 40 3 667 414 340 55 55 chrX 10775474 10775692 -155874604 - MER58A DNA MER1_type 0 224 7 3 667 417 348 56 11 chrX 10775823 10776003 -155874293 - MER5A DNA MER1_type -1 188 1 3 667 632 259 87 29 chrX 10776273 10776480 -155873816 + B4A SINE B4 74 292 0 3 667 22 0 0 0 chrX 10776515 10776537 -155873759 + AT_rich Low_complexity Low_complexity 1 22 0 4 667 294 106 0 0 chrX 10777419 10777466 -155872830 + (CATA)n Simple_repeat Simple_repeat 2 48 0 4 667 617 25 13 0 chrX 10777497 10777576 -155872720 + (CA)n Simple_repeat Simple_repeat 1 80 0 4 667 183 49 0 68 chrX 10778108 10778152 -155872144 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 4 667 935 87 14 0 chrX 10778270 10778408 -155871888 + (TCTA)n Simple_repeat Simple_repeat 3 142 0 4 667 865 257 57 0 chrX 10778417 10778627 -155871669 - ID_B1 SINE B4 -2 222 1 4 667 890 308 111 13 chrX 10778643 10779022 -155871274 - L1MEf LINE L1 -5247 847 432 4 667 297 342 65 24 chrX 10779112 10779368 -155870928 - L1MEf LINE L1 -5795 299 30 4 667 357 24 0 0 chrX 10779865 10779907 -155870389 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 4 667 672 48 0 0 chrX 10779908 10779992 -155870304 + (GA)n Simple_repeat Simple_repeat 1 84 0 4 667 23 33 0 0 chrX 10780020 10780050 -155870246 + AT_rich Low_complexity Low_complexity 1 30 0 4 667 237 389 50 13 chrX 10782002 10782147 -155868149 - LTR16B2 LTR ERVL -73 416 266 4 667 802 299 41 70 chrX 10782147 10782472 -155867824 - MLT1C LTR MaLR -1 466 139 4 667 3333 38 13 0 chrX 10782472 10782863 -155867433 - MTA_Mm LTR MaLR 0 396 1 4 667 802 304 73 61 chrX 10782863 10783003 -155867293 - MLT1C LTR MaLR -356 149 1 4 667 369 0 0 0 chrX 10784544 10784585 -155865711 + (CATAC)n Simple_repeat Simple_repeat 3 43 0 4 667 230 290 90 36 chrX 10784672 10784783 -155865513 - MLT1H LTR MaLR -127 428 312 4 667 376 349 103 0 chrX 10784834 10785009 -155865287 - MLT1H LTR MaLR -276 273 81 4 667 556 330 27 11 chrX 10785021 10785208 -155865088 - MLT1A0 LTR MaLR -18 347 158 4 667 571 293 45 62 chrX 10785620 10785632 -155864664 - B4 SINE B4 -52 240 226 4 667 399 21 0 0 chrX 10785632 10785680 -155864616 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 667 571 293 45 62 chrX 10785680 10785911 -155864385 - B4 SINE B4 -67 225 2 4 667 431 279 150 0 chrX 10785911 10786046 -155864250 - MLT1A0 LTR MaLR -209 156 1 4 667 2357 50 0 4 chrX 10786253 10786552 -155863744 + L1_Mus1 LINE L1 5972 6258 -308 4 667 3290 64 0 0 chrX 10786552 10786960 -155863336 + L1_Mus1 LINE L1 6159 6566 -1 4 667 2184 91 0 52 chrX 10786960 10786985 -155863311 + L1_Mus1 LINE L1 6259 6279 -287 4 667 591 331 106 22 chrX 10787024 10787299 -155862997 - LTR16B2 LTR ERVL -162 300 3 4 667 436 329 109 47 chrX 10787406 10787786 -155862510 + L2 LINE L2 772 1200 -2219 4 667 195 42 0 0 chrX 10787786 10787810 -155862486 + (TTA)n Simple_repeat Simple_repeat 2 25 0 4 667 436 329 109 47 chrX 10787810 10788109 -155862187 + L2 LINE L2 1201 1493 -1926 4 667 993 295 79 37 chrX 10788128 10788611 -155861685 - Lx8 LINE L1 0 7473 6971 4 667 450 0 0 0 chrX 10788611 10788661 -155861635 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 667 291 324 89 55 chrX 10788671 10789053 -155861243 + L2 LINE L2 1491 1885 -1534 4 667 726 117 0 0 chrX 10789397 10789508 -155860788 + (TCCC)n Simple_repeat Simple_repeat 4 114 0 4 667 433 365 33 22 chrX 10792314 10792586 -155857710 - LTR16A1 LTR ERVL 0 456 182 4 667 713 353 87 27 chrX 10793720 10794122 -155856174 - LTR33A LTR ERVL -74 446 21 4 667 636 296 82 9 chrX 10794978 10795210 -155855086 + MLT1A0 LTR MaLR 117 365 0 4 667 2583 70 110 14 chrX 10795215 10795580 -155854716 + MTB LTR MaLR 1 400 0 4 667 1423 67 0 10 chrX 10795806 10796002 -155854294 + L1Md_F2 LINE L1 6373 6566 -16 4 667 8249 54 2 0 chrX 10796249 10797330 -155852966 - L1Md_F2 LINE L1 0 6582 5500 4 667 300 277 126 0 chrX 10797413 10797532 -155852764 + MLT1A0 LTR MaLR 7 140 -225 4 667 419 268 10 0 chrX 10798773 10798870 -155851426 - MIR SINE MIR -162 100 3 4 667 252 0 0 0 chrX 10799559 10799587 -155850709 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 667 413 341 8 8 chrX 10799590 10799720 -155850576 + ORR1E LTR MaLR 22 151 -208 4 667 295 380 33 7 chrX 10800690 10800963 -155849333 + L2 LINE L2 2586 2865 -554 4 667 436 268 37 55 chrX 10801305 10801522 -155848774 - L1MEe LINE L1 -4389 465 253 4 667 601 275 76 31 chrX 10801823 10802048 -155848248 + LTR33 LTR ERVL 225 459 -56 4 667 925 245 24 0 chrX 10802174 10802427 -155847869 + L1MA4 LINE L1 5671 5929 -371 4 667 1023 223 14 0 chrX 10802604 10802815 -155847481 + B3 SINE B2 3 216 0 4 667 814 259 154 8 chrX 10804055 10804308 -155845988 + B4A SINE B4 2 291 -1 4 667 351 65 0 0 chrX 10804333 10804379 -155845917 + (CATA)n Simple_repeat Simple_repeat 3 48 0 4 667 191 275 0 21 chrX 10804390 10804483 -155845813 + (CATATA)n Simple_repeat Simple_repeat 5 95 0 4 667 268 331 30 30 chrX 10804868 10804999 -155845297 + L2c LINE L2 3245 3375 -12 4 667 1058 274 121 9 chrX 10805443 10805774 -155844522 + ORR1D2 LTR MaLR 1 368 -2 4 667 191 305 23 58 chrX 10806426 10806513 -155843783 + L2c LINE L2 3259 3342 -45 4 667 243 311 135 47 chrX 10806550 10806742 -155843554 + MIR SINE MIR 54 262 0 4 667 609 14 0 0 chrX 10807232 10807302 -155842994 + (TC)n Simple_repeat Simple_repeat 2 71 0 4 667 760 332 125 15 chrX 10807464 10807855 -155842441 - LTR16E1 LTR ERVL -1 537 104 4 667 477 34 0 0 chrX 10808068 10808127 -155842169 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 4 667 346 336 47 0 chrX 10809406 10809513 -155840783 + MIR SINE MIR 23 134 -128 4 667 201 290 14 0 chrX 10809905 10809974 -155840322 + MIR SINE MIR 193 262 0 4 667 664 340 73 9 chrX 10810246 10810590 -155839706 - MLT1B LTR MaLR -3 387 22 4 667 448 308 31 6 chrX 10810976 10811136 -155839160 - MER5A1 DNA MER1_type 0 166 3 4 667 364 314 47 51 chrX 10811588 10811803 -155838493 - Charlie19a DNA Charlie -44 342 129 4 667 1082 244 194 6 chrX 10811954 10812304 -155837992 - MTD LTR MaLR 0 419 4 4 667 250 288 0 12 chrX 10812486 10812567 -155837729 - ORR1D1 LTR MaLR -25 354 275 4 667 255 313 20 29 chrX 10812666 10812768 -155837528 - ORR1D1 LTR MaLR -163 196 96 4 667 274 238 11 56 chrX 10812829 10812918 -155837378 - ORR1D1 LTR MaLR -288 86 2 4 667 1640 266 7 2 chrX 10813096 10813500 -155836796 + MTD LTR MaLR 2 407 -12 4 667 296 343 36 14 chrX 10814050 10814189 -155836107 - L2 LINE L2 -588 2831 2690 4 667 596 268 39 84 chrX 10814679 10814989 -155835307 - L1MC4a LINE L1 -3 7879 7584 4 667 1108 79 0 0 chrX 10815037 10815176 -155835120 + B1_Mus1 SINE Alu 1 139 -9 4 667 363 23 0 0 chrX 10815176 10815220 -155835076 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 4 667 548 346 73 87 chrX 10815300 10815356 -155834940 - MLT1G3 LTR MaLR -15 564 521 4 667 988 129 7 7 chrX 10815356 10815504 -155834792 + B1_Mur4 SINE Alu 2 149 -1 4 667 643 318 213 29 chrX 10815504 10815923 -155834373 - MLT1G3 LTR MaLR -59 520 23 4 667 354 314 58 26 chrX 10816197 10816387 -155833909 + MIR SINE MIR 1 196 -66 4 667 940 263 57 73 chrX 10816832 10817217 -155833079 + MTEa LTR MaLR 1 379 0 4 667 341 22 22 0 chrX 10817858 10817904 -155832392 + (GA)n Simple_repeat Simple_repeat 1 47 0 4 667 324 0 0 0 chrX 10817998 10818034 -155832262 + (A)n Simple_repeat Simple_repeat 1 36 0 4 667 261 242 158 24 chrX 10818237 10818364 -155831932 - MIRb SINE MIR -6 262 119 4 667 657 324 118 30 chrX 10818601 10819127 -155831169 - L1ME4a LINE L1 -232 5892 5321 4 667 456 320 127 0 chrX 10819284 10819318 -155830978 + B4A SINE B4 51 91 -201 4 667 216 0 0 0 chrX 10819318 10819342 -155830954 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4 667 456 320 127 0 chrX 10819342 10819504 -155830792 + B4A SINE B4 92 271 -21 4 667 468 0 0 0 chrX 10819520 10819572 -155830724 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 667 790 281 35 0 chrX 10820422 10820621 -155829675 - ID_B1 SINE B4 -16 208 3 4 667 192 111 0 0 chrX 10820968 10821004 -155829292 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 667 200 239 22 0 chrX 10821841 10821887 -155828409 - L2a LINE L2 -19 3407 3361 4 667 620 351 48 46 chrX 10821891 10822324 -155827972 - LTR16E1 LTR ERVL 0 538 105 4 667 240 347 0 10 chrX 10823013 10823112 -155827184 - LTR33 LTR ERVL -183 332 235 4 667 200 200 0 20 chrX 10823525 10823576 -155826720 + GA-rich Low_complexity Low_complexity 2 51 0 4 667 468 270 28 117 chrX 10823719 10823933 -155826363 + B3A SINE B2 4 198 0 4 667 31 0 0 0 chrX 10823933 10823964 -155826332 + AT_rich Low_complexity Low_complexity 1 31 0 4 667 398 327 12 12 chrX 10824543 10824704 -155825592 - MLT1C LTR MaLR -30 437 277 4 667 441 0 0 0 chrX 10824784 10824833 -155825463 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 667 699 288 5 25 chrX 10824835 10825031 -155825265 - B4 SINE B4 -19 273 82 4 667 1789 217 16 24 chrX 10825096 10825473 -155824823 + ORR1D1 LTR MaLR 1 374 0 4 667 290 283 174 0 chrX 10825508 10825646 -155824650 - MLT1C LTR MaLR -208 182 21 4 667 853 262 60 64 chrX 10826156 10826421 -155823875 + B4A SINE B4 1 264 -28 4 667 366 23 0 0 chrX 10826509 10826552 -155823744 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 667 420 333 132 16 chrX 10827877 10828194 -155822102 - L2a LINE L2 -1 3425 3072 4 667 225 234 11 125 chrX 10828819 10828907 -155821389 - LTR16E2 LTR ERVL -40 528 451 4 667 242 60 53 107 chrX 10829192 10829297 -155820999 + A-rich Low_complexity Low_complexity 1 99 0 4 667 225 291 23 23 chrX 10829505 10829593 -155820703 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 4 667 1790 201 58 18 chrX 10829637 10830036 -155820260 + MTD LTR MaLR 5 419 0 4 667 941 218 36 58 chrX 10830365 10830643 -155819653 + RMER10A LTR ERVL 29 300 -142 4 667 360 0 0 0 chrX 10831248 10831288 -155819008 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 667 204 309 62 21 chrX 10833963 10834059 -155816237 + MER5B DNA MER1_type 78 177 -1 4 667 486 298 67 104 chrX 10834291 10834561 -155815735 + ORR1E LTR MaLR 53 312 -47 4 667 230 332 81 14 chrX 10836173 10836384 -155813912 + L1ME3 LINE L1 5843 6067 -95 4 667 309 51 0 0 chrX 10836438 10836477 -155813819 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 667 1348 272 7 0 chrX 10836724 10837011 -155813285 - B4A SINE B4 -3 289 1 4 667 2930 155 93 6 chrX 10837927 10838017 -155812279 - RMER4B LTR ERVK 0 585 494 4 667 510 61 0 0 chrX 10838017 10838083 -155812213 + (GA)n Simple_repeat Simple_repeat 1 66 0 4 667 2930 155 93 6 chrX 10838083 10838530 -155811766 - RMER4B LTR ERVK -92 493 3 4 667 766 287 81 58 chrX 10839255 10839599 -155810697 - ORR1E LTR MaLR -5 354 3 5 667 244 297 32 32 chrX 10839672 10839766 -155810530 - MER5B DNA MER1_type -77 101 8 5 667 563 345 57 32 chrX 10839775 10840021 -155810275 - MLT1J1 LTR MaLR -192 252 1 5 667 1317 251 27 19 chrX 10840101 10840475 -155809821 - L1MA7 LINE L1 -1 6290 5914 5 667 195 42 0 0 chrX 10840665 10840689 -155809607 + (A)n Simple_repeat Simple_repeat 1 24 0 5 667 437 292 70 65 chrX 10841238 10841439 -155808857 - MLT1A0 LTR MaLR -2 363 162 5 667 918 28 0 0 chrX 10841461 10841570 -155808726 + (GGGAGA)n Simple_repeat Simple_repeat 4 112 0 5 667 276 258 0 0 chrX 10841890 10841952 -155808344 - L1ME3A LINE L1 -37 6136 6075 5 667 356 287 25 50 chrX 10842212 10842333 -155807963 - ORR1E LTR MaLR -239 120 3 5 667 1070 296 24 32 chrX 10842402 10842813 -155807483 - L1ME3A LINE L1 -193 5980 5573 5 667 372 315 0 9 chrX 10844146 10844255 -155806041 - MLT1A1 LTR MaLR -9 399 292 5 667 429 141 0 0 chrX 10844324 10844395 -155805901 + (CAA)n Simple_repeat Simple_repeat 2 72 0 5 667 315 290 39 31 chrX 10844441 10844569 -155805727 - MLT1A1 LTR MaLR -279 129 1 5 667 255 295 82 44 chrX 10845598 10845733 -155804563 + YREP_Mm Unknown Unknown 154 293 -1519 5 667 435 268 48 16 chrX 10845612 10845630 -155804666 - B1F2 SINE Alu -1 148 20 5 667 631 215 0 0 chrX 10845630 10845737 -155804559 - ID_B1 SINE B4 -17 207 101 5 667 794 167 7 28 chrX 10845844 10845986 -155804310 + B1_Mur1 SINE Alu 10 148 -1 5 667 259 242 88 29 chrX 10846028 10846130 -155804166 + L2a LINE L2 3319 3426 0 5 667 228 312 84 35 chrX 10846752 10846895 -155803401 - LTR16E1 LTR ERVL -30 508 359 5 667 225 233 0 0 chrX 10847151 10847194 -155803102 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 667 345 373 99 66 chrX 10847730 10848152 -155802144 - MLT1J1 LTR MaLR -5 439 4 5 667 281 336 98 51 chrX 10848205 10848440 -155801856 + ORR1E LTR MaLR 8 253 -106 5 667 361 206 0 14 chrX 10848534 10848603 -155801693 + RMER30 DNA MER1_type 133 200 -2 5 667 240 333 0 10 chrX 10848603 10848695 -155801601 + ORR1E LTR MaLR 289 379 0 5 667 259 217 32 32 chrX 10848777 10848872 -155801424 + (CAAA)n Simple_repeat Simple_repeat 2 96 0 5 667 631 286 103 106 chrX 10849039 10849493 -155800803 + MLT1H2 LTR MaLR 26 478 -11 5 667 725 282 96 9 chrX 10849574 10849803 -155800493 + ORR1E LTR MaLR 1 249 -110 5 667 478 346 34 29 chrX 10851132 10851370 -155798926 + MIR SINE MIR 6 244 -18 5 667 598 360 9 5 chrX 10851573 10851785 -155798511 - MIR SINE MIR -13 249 37 5 667 690 35 0 0 chrX 10852553 10852638 -155797658 + (TC)n Simple_repeat Simple_repeat 2 86 0 5 667 481 311 129 53 chrX 10852764 10853158 -155797138 - MLT1L LTR MaLR -22 588 165 5 667 465 319 44 73 chrX 10854373 10854579 -155795717 + MLT1J LTR MaLR 3 202 -310 5 667 222 295 29 128 chrX 10855347 10855460 -155794836 - L2a LINE L2 -52 3374 3242 5 667 183 354 149 10 chrX 10855511 10855719 -155794577 - L2a LINE L2 -579 2840 2604 5 667 835 302 124 85 chrX 10855923 10856358 -155793938 + LTR16B LTR ERVL 3 454 -9 5 667 269 286 93 87 chrX 10856377 10856538 -155793758 - L2a LINE L2 -1026 2393 2232 5 667 1319 326 51 15 chrX 10856812 10857565 -155792731 - L1MA4 LINE L1 -370 5930 5091 5 667 182 347 125 55 chrX 10857639 10857895 -155792401 - L2a LINE L2 -1834 1585 1312 5 667 654 282 109 29 chrX 10858403 10858687 -155791609 + MLT2D LTR ERVL 102 544 -12 5 667 462 75 25 12 chrX 10858692 10858773 -155791523 + (CA)n Simple_repeat Simple_repeat 2 83 0 5 667 402 121 0 0 chrX 10858813 10858879 -155791417 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 667 189 0 0 0 chrX 10858942 10858963 -155791333 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 667 238 296 49 39 chrX 10859101 10859203 -155791093 + L3 LINE CR1 3882 3984 -505 5 667 1258 176 59 51 chrX 10859262 10859669 -155790627 - ORR1A4 LTR MaLR -51 343 1 5 667 381 300 76 15 chrX 10860156 10860288 -155790008 - MLT1A1 LTR MaLR 0 408 269 5 667 390 75 0 0 chrX 10860364 10860417 -155789879 - RLTR10-int LTR ERVK -1932 55 3 5 667 3440 44 34 78 chrX 10860419 10860916 -155789380 - IAPLTR2_Mm LTR ERVK 0 475 1 5 667 239 152 43 21 chrX 10862053 10862100 -155788196 - MIR3 SINE MIR -6 202 155 5 667 276 343 195 45 chrX 10862788 10863156 -155787140 - MLT1L LTR MaLR -173 437 14 5 667 1829 228 63 10 chrX 10864091 10864489 -155785807 + MTD LTR MaLR 1 419 0 5 667 194 258 145 0 chrX 10864958 10865020 -155785276 - L3 LINE CR1 -1111 3378 3308 5 667 204 200 0 0 chrX 10865084 10865129 -155785167 + CT-rich Low_complexity Low_complexity 1 45 0 5 667 681 262 74 32 chrX 10865613 10865802 -155784494 - B4A SINE B4 -95 197 1 5 667 248 253 14 39 chrX 10866209 10866308 -155783988 + MLT1A1 LTR MaLR 263 396 -12 5 667 243 358 37 0 chrX 10866310 10866419 -155783877 + LTR16C LTR ERVL 219 331 -158 5 667 198 328 59 42 chrX 10866673 10866791 -155783505 - MIR SINE MIR -70 192 73 5 667 338 244 24 12 chrX 10867020 10867103 -155783193 + GA-rich Low_complexity Low_complexity 3 86 0 5 667 328 335 70 70 chrX 10867519 10867555 -155782741 - LTR16A LTR ERVL -95 356 321 5 667 645 58 0 0 chrX 10867555 10867641 -155782655 + (GA)n Simple_repeat Simple_repeat 1 86 0 5 667 328 335 70 70 chrX 10867641 10867803 -155782493 - LTR16A LTR ERVL -131 320 158 5 667 691 279 78 5 chrX 10868215 10868420 -155781876 + MTE2b LTR MaLR 2 221 -158 5 667 1595 93 13 4 chrX 10868423 10868650 -155781646 - L1_Mus3 LINE L1 -8 6630 6402 5 667 6220 59 1 0 chrX 10868650 10869416 -155780880 + L1_Mus3 LINE L1 5626 6392 -246 5 667 378 239 142 97 chrX 10869416 10869592 -155780704 + MTE2b LTR MaLR 196 379 0 5 667 552 15 0 0 chrX 10869708 10869773 -155780523 + (CA)n Simple_repeat Simple_repeat 1 65 0 5 667 243 0 0 0 chrX 10871378 10871405 -155778891 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 5 667 273 226 38 0 chrX 10871453 10871506 -155778790 - MER5A1 DNA MER1_type -111 55 1 5 667 312 358 66 28 chrX 10871623 10871804 -155778492 + MIRb SINE MIR 1 188 -80 5 667 384 329 7 7 chrX 10872069 10872210 -155778086 + (TGGA)n Simple_repeat Simple_repeat 4 144 0 5 667 215 246 82 0 chrX 10873138 10873199 -155777097 + MIR3 SINE MIR 121 186 -22 5 667 630 302 115 165 chrX 10873585 10874100 -155776196 + MLT1G1 LTR MaLR 1 579 0 5 667 3323 53 5 14 chrX 10875451 10875874 -155774422 - L1_Mus2 LINE L1 -3 6563 6145 5 667 398 342 64 16 chrX 10875966 10876153 -155774143 + B4A SINE B4 78 273 -19 5 667 1891 137 99 0 chrX 10877387 10877709 -155772587 + Lx3B LINE L1 6620 6973 0 5 667 183 204 0 0 chrX 10877877 10877921 -155772375 + CT-rich Low_complexity Low_complexity 2 45 0 5 667 515 186 118 0 chrX 10877926 10878028 -155772268 - B1_Mur4 SINE Alu -8 142 29 5 83 3343 52 5 14 chrX 10878618 10879043 -155771253 - L1_Mus2 LINE L1 -1 6565 6145 5 668 398 342 64 16 chrX 10879135 10879322 -155770974 + B4A SINE B4 78 273 -19 5 668 1873 137 99 0 chrX 10880555 10880877 -155769419 + Lx3B LINE L1 6620 6973 0 5 668 231 295 0 16 chrX 10881026 10881088 -155769208 + CT-rich Low_complexity Low_complexity 2 62 0 5 668 515 186 118 0 chrX 10881091 10881193 -155769103 - B1_Mur4 SINE Alu -8 142 29 5 668 3343 52 5 14 chrX 10881783 10882208 -155768088 - L1_Mus2 LINE L1 -1 6565 6145 5 668 398 342 64 16 chrX 10882300 10882487 -155767809 + B4A SINE B4 78 273 -19 5 668 1862 140 99 0 chrX 10883721 10884043 -155766253 + Lx3B LINE L1 6620 6973 0 5 668 183 204 0 0 chrX 10884211 10884255 -155766041 + CT-rich Low_complexity Low_complexity 2 45 0 5 668 515 186 118 0 chrX 10884260 10884362 -155765934 - B1_Mur4 SINE Alu -8 142 29 5 668 3343 52 5 14 chrX 10884952 10885377 -155764919 - L1_Mus2 LINE L1 -1 6565 6145 5 668 398 342 64 16 chrX 10885469 10885656 -155764640 + B4A SINE B4 78 273 -19 5 668 1873 137 99 0 chrX 10886890 10887212 -155763084 + Lx3B LINE L1 6620 6973 0 5 668 216 182 0 0 chrX 10887378 10887422 -155762874 + CT-rich Low_complexity Low_complexity 2 45 0 5 668 531 186 118 0 chrX 10887427 10887529 -155762767 - B1_Mur4 SINE Alu -8 142 29 5 668 3343 52 5 14 chrX 10888119 10888544 -155761752 - L1_Mus2 LINE L1 -1 6565 6145 5 668 398 342 64 16 chrX 10888636 10888823 -155761473 + B4A SINE B4 78 273 -19 5 668 1891 137 99 0 chrX 10890057 10890379 -155759917 + Lx3B LINE L1 6620 6973 0 5 668 216 182 0 0 chrX 10890545 10890589 -155759707 + CT-rich Low_complexity Low_complexity 2 45 0 5 668 515 186 118 0 chrX 10890594 10890696 -155759600 - B1_Mur4 SINE Alu -8 142 29 5 668 3273 60 5 14 chrX 10891286 10891711 -155758585 - L1_Mus2 LINE L1 -1 6565 6145 5 668 1878 140 99 0 chrX 10893224 10893546 -155756750 + Lx3B LINE L1 6620 6973 0 5 668 216 182 0 0 chrX 10893712 10893756 -155756540 + CT-rich Low_complexity Low_complexity 2 45 0 5 668 515 186 118 0 chrX 10893761 10893863 -155756433 - B1_Mur4 SINE Alu -8 142 29 5 668 3273 60 5 14 chrX 10894453 10894878 -155755418 - L1_Mus2 LINE L1 -1 6565 6145 5 668 1857 143 99 0 chrX 10896391 10896713 -155753583 + Lx3B LINE L1 6620 6973 0 5 668 216 182 0 0 chrX 10896879 10896923 -155753373 + CT-rich Low_complexity Low_complexity 2 45 0 5 668 515 186 118 0 chrX 10896928 10897030 -155753266 - B1_Mur4 SINE Alu -8 142 29 5 668 3273 60 5 14 chrX 10897620 10898045 -155752251 - L1_Mus2 LINE L1 -1 6565 6145 5 668 1857 143 99 0 chrX 10899558 10899880 -155750416 + Lx3B LINE L1 6620 6973 0 5 668 216 182 0 0 chrX 10900046 10900090 -155750206 + CT-rich Low_complexity Low_complexity 2 45 0 5 668 515 186 118 0 chrX 10900095 10900197 -155750099 - B1_Mur4 SINE Alu -8 142 29 5 668 3276 60 5 14 chrX 10900787 10901212 -155749084 - L1_Mus2 LINE L1 -1 6565 6145 5 668 1857 143 99 0 chrX 10902725 10903047 -155747249 + Lx3B LINE L1 6620 6973 0 5 668 204 125 0 0 chrX 10903213 10903245 -155747051 + (TCC)n Simple_repeat Simple_repeat 2 33 0 6 668 574 157 118 0 chrX 10903262 10903364 -155746932 - B1_Mur4 SINE Alu -8 142 29 6 668 3303 55 5 14 chrX 10903954 10904379 -155745917 - L1_Mus2 LINE L1 -1 6565 6145 6 668 426 348 59 16 chrX 10904471 10904658 -155745638 + B4A SINE B4 78 272 -20 6 668 566 244 116 2 chrX 10905290 10905437 -155744859 - B3 SINE B2 -34 164 3 6 668 207 0 0 0 chrX 10905448 10905471 -155744825 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 6 668 250 77 37 37 chrX 10905476 10905530 -155744766 + (CAGAGA)n Simple_repeat Simple_repeat 2 55 0 6 668 638 279 5 68 chrX 10905530 10905698 -155744598 - B3A SINE B2 -41 154 1 6 668 186 43 0 0 chrX 10905710 10905733 -155744563 + (TATAA)n Simple_repeat Simple_repeat 3 25 0 6 668 534 131 0 0 chrX 10905747 10905846 -155744450 + (TA)n Simple_repeat Simple_repeat 2 100 0 6 668 203 253 62 25 chrX 10906085 10906166 -155744130 - MIRb SINE MIR -161 107 24 6 668 202 277 61 15 chrX 10906554 10906620 -155743676 + MIR SINE MIR 5 73 -189 6 668 197 270 26 26 chrX 10906625 10906701 -155743595 + L2a LINE L2 3283 3358 -68 6 668 369 0 0 0 chrX 10906860 10906901 -155743395 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 668 280 291 0 37 chrX 10908283 10908294 -155742002 - PB1D9 SINE Alu -2 118 110 6 668 259 0 47 47 chrX 10908294 10908337 -155741959 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 668 280 291 0 37 chrX 10908337 10908407 -155741889 - PB1D9 SINE Alu -11 109 40 6 668 372 22 0 0 chrX 10908679 10908724 -155741572 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 668 809 275 7 83 chrX 10908760 10909061 -155741235 - Lx8 LINE L1 -9 7464 7187 6 668 346 270 15 73 chrX 10909065 10909201 -155741095 - Lx7 LINE L1 -1956 5740 5613 6 668 322 240 93 0 chrX 10909256 10909331 -155740965 - ID4_ SINE ID -1 82 1 6 668 257 254 18 15 chrX 10909347 10909414 -155740882 - B1F SINE Alu -59 68 1 6 668 293 308 77 67 chrX 10909785 10909980 -155740316 - MamRep434 DNA TcMar -222 204 8 6 668 297 0 0 0 chrX 10910451 10910484 -155739812 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 668 425 367 38 38 chrX 10910487 10910671 -155739625 - LTR16A LTR ERVL -267 184 1 6 668 230 364 115 25 chrX 10911105 10911305 -155738991 - MIR SINE MIR -20 242 25 6 668 1157 57 13 0 chrX 10911555 10911712 -155738584 + (TAGA)n Simple_repeat Simple_repeat 4 162 0 6 668 550 179 372 32 chrX 10911720 10911876 -155738420 + B3 SINE B2 1 209 -7 6 668 514 363 97 57 chrX 10911919 10912340 -155737956 - LTR16C LTR ERVL -40 449 12 6 668 531 0 0 0 chrX 10912412 10912471 -155737825 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 668 576 318 142 39 chrX 10912473 10912901 -155737395 + MLT1D LTR MaLR 34 505 0 6 668 201 304 73 42 chrX 10913003 10913099 -155737197 - MIRc SINE MIR -76 192 94 6 668 864 226 28 11 chrX 10913712 10913891 -155736405 + ORR1E LTR MaLR 3 184 -175 6 668 690 105 0 0 chrX 10913936 10914041 -155736255 + (TC)n Simple_repeat Simple_repeat 2 106 0 6 668 244 170 19 19 chrX 10914112 10914166 -155736130 + ORR1E LTR MaLR 326 379 0 6 668 201 179 0 25 chrX 10914735 10914775 -155735521 + GA-rich Low_complexity Low_complexity 1 39 0 6 668 270 270 99 68 chrX 10915692 10915855 -155734441 + MLT1G1 LTR MaLR 346 563 -16 6 668 402 376 17 0 chrX 10916128 10916306 -155733990 - MIR3 SINE MIR -7 201 21 6 668 2091 143 59 22 chrX 10916600 10916971 -155733325 - ORR1B1 LTR MaLR -9 385 1 6 668 551 314 106 109 chrX 10916971 10917311 -155732985 - ORR1E LTR MaLR -20 339 1 6 668 192 111 0 0 chrX 10917513 10917549 -155732747 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 6 668 531 222 353 0 chrX 10917709 10917862 -155732434 + B3 SINE B2 1 207 -9 6 668 359 0 43 0 chrX 10917862 10917908 -155732388 + (TAAA)n Simple_repeat Simple_repeat 3 50 0 6 668 182 342 40 14 chrX 10917995 10918069 -155732227 + L2b LINE L2 3118 3193 -182 6 668 748 254 59 36 chrX 10918072 10918325 -155731971 - Kanga1 DNA Tc2 -3 1742 1484 6 668 1043 295 10 0 chrX 10918343 10918648 -155731648 + L1MA6 LINE L1 5990 6297 -3 6 668 267 253 11 57 chrX 10919152 10919240 -155731056 + MIR SINE MIR 63 146 -62 6 668 253 245 33 53 chrX 10920182 10920215 -155730081 + RMER17A2 LTR ERVK 253 287 -619 6 668 780 53 17 9 chrX 10920215 10920330 -155729966 + (TTCTC)n Simple_repeat Simple_repeat 5 120 0 6 668 253 245 33 53 chrX 10920330 10920447 -155729849 + RMER17A2 LTR ERVK 288 400 -506 6 668 599 195 0 66 chrX 10920416 10920537 -155729759 - B1_Mur4 SINE Alu -15 135 23 6 668 180 260 98 68 chrX 10920962 10921094 -155729202 - L2c LINE L2 -241 3146 3011 6 668 309 317 176 50 chrX 10921119 10921358 -155728938 - MLT1J LTR MaLR -10 502 234 6 668 242 379 8 17 chrX 10921367 10921485 -155728811 - LTR16E1 LTR ERVL 0 538 422 6 668 395 298 24 8 chrX 10921503 10921628 -155728668 + B1F SINE Alu 22 148 -1 6 668 516 286 11 11 chrX 10921659 10921839 -155728457 + GA-rich Low_complexity Low_complexity 1 180 0 6 668 852 338 72 21 chrX 10921888 10922317 -155727979 - LTR16E1 LTR ERVL -82 456 6 6 668 312 278 125 16 chrX 10923629 10923757 -155726539 + LFSINE_Vert SINE SINE 136 277 -182 6 668 498 33 0 0 chrX 10924860 10924920 -155725376 + (TTCC)n Simple_repeat Simple_repeat 1 60 0 6 668 962 264 20 48 chrX 10925109 10925403 -155724893 + B4A SINE B4 5 290 -2 6 668 396 0 0 0 chrX 10925431 10925475 -155724821 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 668 524 98 29 29 chrX 10926422 10926527 -155723769 + L1Md_F2 LINE L1 6478 6582 0 6 668 197 319 28 42 chrX 10928508 10928580 -155721716 + L2b LINE L2 2989 3059 -316 6 668 333 319 129 62 chrX 10928735 10928929 -155721367 + MLT1K LTR MaLR 71 277 -318 6 668 453 297 29 0 chrX 10928983 10929121 -155721175 + B1F SINE Alu 3 144 -5 6 668 951 311 38 8 chrX 10929293 10929533 -155720763 - B4 SINE B4 0 292 46 6 668 544 281 65 13 chrX 10930501 10930656 -155719640 - B3 SINE B2 -7 209 47 6 668 653 279 29 44 chrX 10930713 10930919 -155719377 - ID_B1 SINE B4 -7 217 15 6 668 958 306 135 33 chrX 10931169 10932100 -155718196 + L1MC4 LINE L1 6825 7850 -192 6 668 297 0 0 0 chrX 10932361 10932394 -155717902 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 668 314 258 0 43 chrX 10932469 10932562 -155717734 - MER3 DNA MER1_type -1 208 120 6 668 248 241 112 69 chrX 10932631 10932747 -155717549 + MIR SINE MIR 61 181 -81 6 668 1149 286 89 17 chrX 10933831 10934180 -155716116 + MLT1G1 LTR MaLR 163 536 -43 6 668 308 319 35 9 chrX 10934400 10934514 -155715782 - LTR81C LTR ERV1? -977 176 60 6 668 356 269 43 11 chrX 10934801 10934895 -155715401 - B1F SINE Alu -21 128 32 6 668 303 297 118 8 chrX 10934807 10934926 -155715370 - ID_B1 SINE B4 -24 200 69 6 668 392 292 0 70 chrX 10935465 10935579 -155714717 + PB1D10 SINE Alu 1 106 -11 6 668 273 57 0 0 chrX 10935580 10935615 -155714681 + (CAA)n Simple_repeat Simple_repeat 1 35 0 6 668 269 196 0 0 chrX 10935959 10936005 -155714291 - MLT2D LTR ERVL -2 558 513 6 668 297 373 0 22 chrX 10936059 10936196 -155714100 + (CAGAGA)n Simple_repeat Simple_repeat 3 136 0 6 668 719 291 134 34 chrX 10936251 10936571 -155713725 - MLT2D LTR ERVL -61 353 2 6 668 242 353 39 50 chrX 10936779 10936958 -155713338 - LTR16E1 LTR ERVL -52 486 310 6 668 371 351 6 45 chrX 10937258 10937582 -155712714 + L1M5 LINE L1 5482 5789 -405 6 668 1032 270 81 102 chrX 10937584 10937967 -155712329 - MTE2a LTR MaLR -2 377 3 6 668 447 265 0 25 chrX 10938365 10938485 -155711811 - PB1D10 SINE Alu 0 117 1 6 668 975 262 159 6 chrX 10938719 10939065 -155711231 + Charlie4a DNA MER1_type 76 474 -34 6 668 1004 287 18 18 chrX 10940281 10940561 -155709735 - B4A SINE B4 -8 284 5 6 668 657 332 33 16 chrX 10941756 10942001 -155708295 + MIR SINE MIR 13 261 -1 6 668 418 341 17 0 chrX 10942630 10942806 -155707490 + CT-rich Low_complexity Low_complexity 1 179 0 6 668 650 113 32 0 chrX 10942830 10942954 -155707342 + (TC)n Simple_repeat Simple_repeat 1 128 0 6 668 615 283 102 77 chrX 10943437 10943984 -155706312 - MLT1G LTR MaLR 0 555 1 6 668 922 182 193 0 chrX 10944505 10944686 -155705610 - B3 SINE B2 0 216 1 6 668 1975 144 50 91 chrX 10944739 10945122 -155705174 + ORR1B2 LTR MaLR 1 367 0 6 668 258 234 42 11 chrX 10945390 10945485 -155704811 + CT-rich Low_complexity Low_complexity 4 101 0 6 668 502 248 19 19 chrX 10946392 10946499 -155703797 + PB1D10 SINE Alu 11 117 0 6 668 857 228 19 57 chrX 10946535 10946744 -155703552 - B3 SINE B2 0 216 16 6 668 234 0 0 0 chrX 10946765 10946791 -155703505 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 668 710 333 123 26 chrX 10947110 10947452 -155702844 - RMER15 LTR ERVL -14 561 187 6 668 459 0 0 0 chrX 10947909 10947960 -155702336 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 668 282 286 124 45 chrX 10948689 10948898 -155701398 + MIR SINE MIR 21 230 -32 6 668 717 258 206 41 chrX 10949105 10949569 -155700727 - L1MA9 LINE L1 0 6312 5795 6 668 471 35 0 0 chrX 10949609 10949666 -155700630 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 668 779 268 40 40 chrX 10949668 10949968 -155700328 + MTEa LTR MaLR 6 353 -26 6 668 387 0 0 0 chrX 10949989 10950032 -155700264 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 668 494 253 86 25 chrX 10950034 10950196 -155700100 - L1MA9 LINE L1 -526 5765 5594 6 668 573 268 45 73 chrX 10950172 10950458 -155699838 - L1MA9 LINE L1 -996 5147 4870 6 668 468 318 105 10 chrX 10950600 10950800 -155699496 + LTR16B1 LTR ERVL 121 339 -141 6 668 266 284 0 26 chrX 10950812 10950888 -155699408 + LTR16B1 LTR ERVL 407 480 0 6 668 211 269 26 0 chrX 10951161 10951239 -155699057 + CT-rich Low_complexity Low_complexity 3 82 0 6 668 345 291 0 0 chrX 10951292 10951371 -155698925 + ID2 SINE ID 5 83 0 7 668 984 252 5 10 chrX 10951393 10951601 -155698695 + ID_B1 SINE B4 2 208 -16 7 668 1199 81 12 0 chrX 10951601 10951773 -155698523 + (GAAA)n Simple_repeat Simple_repeat 3 176 0 7 668 367 187 33 0 chrX 10951773 10951864 -155698432 + GA-rich Low_complexity Low_complexity 4 97 0 7 668 426 340 12 47 chrX 10953242 10953412 -155696884 - LTR16A LTR ERVL -7 482 319 7 668 656 347 30 60 chrX 10954125 10954490 -155695806 - LTR16A LTR ERVL -97 354 1 7 668 219 255 0 56 chrX 10954555 10954609 -155695687 + B1F SINE Alu 96 146 -3 7 668 505 284 52 20 chrX 10954736 10954908 -155695388 + ORR1E LTR MaLR 3 176 -194 7 668 217 289 0 35 chrX 10954919 10955005 -155695291 + CT-rich Low_complexity Low_complexity 3 85 0 7 668 320 312 23 73 chrX 10955005 10955213 -155695083 + ORR1E LTR MaLR 156 377 -2 7 668 758 249 26 69 chrX 10955746 10955959 -155694337 + RMER15 LTR ERVL 336 541 -34 7 668 3621 129 185 13 chrX 10955959 10956585 -155693711 - RMER19A LTR ERVK 0 737 4 7 668 758 249 26 69 chrX 10956585 10956604 -155693692 + RMER15 LTR ERVL 542 558 -17 7 668 1777 194 41 6 chrX 10957428 10957770 -155692526 + Lx5 LINE L1 6693 7046 -4 7 668 425 305 99 50 chrX 10957794 10958056 -155692240 + B4 SINE B4 2 276 -16 7 668 249 33 0 0 chrX 10958076 10958106 -155692190 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 668 541 317 0 57 chrX 10958776 10958953 -155691343 + B4 SINE B4 6 172 -120 7 668 543 31 0 0 chrX 10959430 10959495 -155690801 + (TCC)n Simple_repeat Simple_repeat 3 67 0 7 668 1616 214 51 72 chrX 10959636 10960009 -155690287 - MTE2b LTR MaLR -12 367 3 7 668 196 177 113 18 chrX 10960354 10960428 -155689868 + MIR SINE MIR 47 137 -139 7 668 434 313 52 95 chrX 10960466 10960815 -155689481 - ORR1E LTR MaLR -4 355 22 7 668 837 317 52 0 chrX 10960958 10961229 -155689067 + B4A SINE B4 2 286 -6 7 668 270 0 0 0 chrX 10961229 10961259 -155689037 + (TC)n Simple_repeat Simple_repeat 1 30 0 7 668 545 0 15 0 chrX 10961259 10961323 -155688973 + (CA)n Simple_repeat Simple_repeat 1 66 0 7 668 291 329 14 27 chrX 10962501 10962648 -155687648 - L1ME2 LINE L1 -103 6061 5917 7 668 362 266 30 55 chrX 10962745 10962930 -155687366 - MTEa LTR MaLR 0 379 202 7 668 458 33 17 0 chrX 10962930 10962990 -155687306 + (GGGA)n Simple_repeat Simple_repeat 2 62 0 7 668 1906 145 7 125 chrX 10963145 10963609 -155686687 - RMER17C LTR ERVK 0 410 2 7 668 334 345 87 43 chrX 10963610 10963795 -155686501 - L1MD LINE L1 -489 5753 5561 7 668 473 363 90 40 chrX 10963813 10964091 -155686205 - MLT1J LTR MaLR -190 322 31 7 668 921 208 73 16 chrX 10965106 10965297 -155684999 + ID_B1 SINE B4 9 210 -14 7 668 180 0 0 0 chrX 10965297 10965317 -155684979 + (GGAA)n Simple_repeat Simple_repeat 1 20 0 7 668 729 0 0 0 chrX 10965317 10965398 -155684898 + (GGGAA)n Simple_repeat Simple_repeat 2 82 0 7 668 249 108 0 0 chrX 10965398 10965435 -155684861 + (GGGA)n Simple_repeat Simple_repeat 4 40 0 7 668 2788 57 3 0 chrX 10965513 10965862 -155684434 + L1Md_F2 LINE L1 6233 6582 0 7 668 193 310 45 78 chrX 10966931 10967085 -155683211 - MIRc SINE MIR -76 192 44 7 668 241 342 85 8 chrX 10967291 10967409 -155682887 - L2c LINE L2 -18 3369 3243 7 668 898 281 19 14 chrX 10968057 10968270 -155682026 - B4 SINE B4 -6 286 73 7 668 353 262 44 57 chrX 10968320 10968478 -155681818 + MER3 DNA MER1_type 16 171 -38 7 668 378 312 0 0 chrX 10969147 10969243 -155681053 - RMER15 LTR ERVL -109 466 371 7 668 294 297 0 0 chrX 10969250 10969324 -155680972 - Lx8 LINE L1 -247 7226 7153 7 668 2069 146 55 0 chrX 10969414 10969757 -155680539 + ORR1D1 LTR MaLR 1 362 -12 7 668 587 230 9 0 chrX 10970292 10970405 -155679891 + B1_Mur1 SINE Alu 1 114 -35 7 668 279 0 0 0 chrX 10970406 10970437 -155679859 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 7 668 636 133 0 0 chrX 10970446 10970544 -155679752 + ORR1D1 LTR MaLR 9 106 -268 7 668 431 332 91 44 chrX 10970549 10970878 -155679418 + MLT1K LTR MaLR 271 610 0 7 668 243 0 0 0 chrX 10971164 10971191 -155679105 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 7 668 234 0 0 0 chrX 10971195 10971221 -155679075 + (ATTG)n Simple_repeat Simple_repeat 3 28 0 7 668 376 283 10 48 chrX 10971302 10971406 -155678890 + PB1D7 SINE Alu 5 104 -16 7 668 465 103 0 0 chrX 10971411 10971479 -155678817 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 7 668 250 284 72 21 chrX 10971633 10971730 -155678566 - MIR SINE MIR -97 165 64 7 668 328 320 8 90 chrX 10971746 10971880 -155678416 + MTEa LTR MaLR 1 123 -256 7 668 407 297 47 42 chrX 10972249 10972442 -155677854 - ORR1E LTR MaLR -165 194 1 7 668 642 89 0 0 chrX 10972897 10972987 -155677309 + (GA)n Simple_repeat Simple_repeat 1 90 0 7 668 1579 208 96 27 chrX 10974181 10974547 -155675749 - MTD LTR MaLR -16 403 13 7 668 331 292 74 19 chrX 10975445 10975553 -155674743 + PB1D10 SINE Alu 3 116 -1 7 668 383 284 35 124 chrX 10975562 10975707 -155674589 + RSINE1 SINE B4 1 132 -33 7 668 226 222 0 0 chrX 10975716 10975770 -155674526 + CT-rich Low_complexity Low_complexity 2 55 0 7 668 231 88 0 0 chrX 10976323 10976357 -155673939 + (CAGG)n Simple_repeat Simple_repeat 3 36 0 7 668 22 35 0 0 chrX 10977552 10977581 -155672715 + AT_rich Low_complexity Low_complexity 1 29 0 7 668 342 326 0 0 chrX 10977949 10978047 -155672249 + RSINE1 SINE B4 68 165 0 7 668 276 211 163 31 chrX 10978068 10978166 -155672130 - MLT1A1 LTR MaLR -30 378 268 7 668 1640 196 26 67 chrX 10978301 10978689 -155671607 + ORR1D1 LTR MaLR 3 374 0 7 668 1254 238 57 0 chrX 10978736 10978984 -155671312 - MTEa LTR MaLR -117 262 1 7 668 441 340 18 102 chrX 10979331 10979557 -155670739 + MLT1H-int LTR MaLR 323 529 -880 7 668 547 348 71 17 chrX 10979828 10980068 -155670228 - MLT1G LTR MaLR -13 578 326 7 668 383 309 0 0 chrX 10980186 10980283 -155670013 + ORR1E LTR MaLR 51 147 -212 7 668 387 0 0 0 chrX 10980328 10980371 -155669925 + (TTG)n Simple_repeat Simple_repeat 1 43 0 7 668 654 201 67 7 chrX 10980371 10980495 -155669801 - B1_Mur2 SINE Alu -13 136 6 7 668 551 308 5 51 chrX 10981721 10981916 -155668380 - LTR16C LTR ERVL -1 488 303 7 668 288 311 66 0 chrX 10983168 10983290 -155667006 + MIR SINE MIR 114 243 -19 7 668 435 178 88 82 chrX 10983797 10983944 -155666352 + MER53 DNA hAT 45 192 -1 7 668 273 352 40 62 chrX 10984002 10984229 -155666067 - LTR16E1 LTR ERVL -7 531 310 7 668 480 349 0 0 chrX 10984372 10984481 -155665815 + RSINE1 SINE B4 57 165 0 7 668 246 381 102 56 chrX 10985009 10985401 -155664895 - L2b LINE L2 -11 3364 2955 7 668 375 310 22 65 chrX 10985574 10985712 -155664584 + B1F SINE Alu 18 149 0 7 668 297 290 0 0 chrX 10985717 10985786 -155664510 + ID4 SINE ID 1 69 -14 7 668 1062 98 0 0 chrX 10985791 10985944 -155664352 + (GGAA)n Simple_repeat Simple_repeat 4 156 0 7 668 252 347 63 0 chrX 10985954 10986049 -155664247 + B1_Mur4 SINE Alu 3 103 -47 7 668 213 308 116 83 chrX 10986083 10986183 -155664113 - L2b LINE L2 -728 2691 2598 7 668 423 0 0 0 chrX 10986183 10986230 -155664066 + (GA)n Simple_repeat Simple_repeat 1 47 0 7 668 213 308 116 83 chrX 10986230 10986345 -155663951 - L2b LINE L2 -822 2597 2469 7 668 720 123 0 0 chrX 10987017 10987163 -155663133 + (TC)n Simple_repeat Simple_repeat 1 146 0 7 668 198 0 0 0 chrX 10987162 10987184 -155663112 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 668 456 19 0 0 chrX 10987184 10987237 -155663059 + (CCA)n Simple_repeat Simple_repeat 1 53 0 7 668 519 287 60 0 chrX 10988024 10988174 -155662122 + MIR SINE MIR 89 247 -15 7 668 1207 283 118 22 chrX 10988203 10988611 -155661685 - MLT1C LTR MaLR -9 458 12 7 668 243 345 95 52 chrX 10989085 10989317 -155660979 - LTR16A1 LTR ERVL -2 454 213 7 668 183 346 140 30 chrX 10989527 10989691 -155660605 - L2 LINE L2 -583 2836 2655 7 668 372 271 10 10 chrX 10989988 10990085 -155660211 - RMER15 LTR ERVL -108 467 371 7 668 902 306 148 8 chrX 10990093 10990452 -155659844 - Lx8 LINE L1 -248 7225 6817 7 668 216 294 133 29 chrX 10990456 10990561 -155659735 - ID_B1 SINE B4 -22 202 87 7 668 227 204 20 20 chrX 10990891 10990941 -155659355 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 668 301 274 79 56 chrX 10990967 10991056 -155659240 + MER5A DNA MER1_type 99 189 0 7 668 204 156 0 111 chrX 10991625 10991697 -155658599 + T-rich Low_complexity Low_complexity 3 66 0 7 668 786 276 10 19 chrX 10991704 10991911 -155658385 - ID_B1 SINE B4 -18 206 2 7 668 623 315 36 52 chrX 10992007 10992255 -155658041 - MLT1G3 LTR MaLR -195 400 157 7 668 453 340 41 36 chrX 10992273 10992468 -155657828 - MLT1G3 LTR MaLR -383 196 1 7 668 453 286 26 15 chrX 10994084 10994241 -155656055 + L1MB5 LINE L1 5703 5876 -298 7 668 341 300 114 35 chrX 10994250 10994364 -155655932 + RSINE1 SINE B4 28 150 -15 7 668 253 293 61 48 chrX 10994472 10994637 -155655659 + L1MB5 LINE L1 5976 6142 -42 7 668 520 232 133 31 chrX 10994673 10994869 -155655427 - ID_B1 SINE B4 -8 216 1 7 668 200 350 144 22 chrX 10995354 10995535 -155654761 - MIR SINE MIR -52 210 8 7 668 217 204 20 0 chrX 10996011 10996060 -155654236 + MIRc SINE MIR 112 161 -107 7 668 404 267 11 111 chrX 10997406 10997587 -155652709 + RSINE1 SINE B4 3 165 0 7 668 1059 264 42 31 chrX 10998677 10998966 -155651330 - B4 SINE B4 0 292 1 7 668 214 355 64 94 chrX 10999158 10999562 -155650734 + L3 LINE CR1 3074 3465 -1024 7 668 272 261 114 0 chrX 10999600 10999688 -155650608 - MLT1J2 LTR MaLR 0 448 351 8 668 368 328 73 8 chrX 10999779 10999902 -155650394 - MLT1J2 LTR MaLR -267 181 51 8 668 319 296 8 57 chrX 11000240 11000362 -155649934 + L3 LINE CR1 3569 3684 -805 1 668 244 353 119 48 chrX 11000380 11000648 -155649648 - LTR33 LTR ERVL 0 515 229 2 668 447 352 48 48 chrX 11001148 11001357 -155648939 - LTR33 LTR ERVL -272 243 35 2 668 229 288 27 96 chrX 11001480 11001553 -155648743 + B4 SINE B4 56 123 -169 3 668 839 207 169 71 chrX 11001725 11001980 -155648316 + B4A SINE B4 13 292 0 4 668 319 273 75 62 chrX 11002459 11002526 -155647770 + Lx8 LINE L1 6129 6201 -1272 5 668 932 117 35 0 chrX 11002526 11002671 -155647625 + B1_Mur4 SINE Alu 1 150 0 6 668 411 21 0 0 chrX 11002678 11002726 -155647570 + (GA)n Simple_repeat Simple_repeat 2 49 0 7 668 319 273 75 62 chrX 11002726 11002810 -155647486 + Lx8 LINE L1 6209 6290 -1183 5 668 1075 188 42 22 chrX 11002810 11003304 -155646992 - RMER17C LTR ERVK 0 410 3 8 668 1122 80 0 0 chrX 11003330 11003468 -155646828 + B1_Mus1 SINE Alu 1 138 -10 9 668 180 0 0 0 chrX 11003468 11003488 -155646808 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 668 3200 285 99 22 chrX 11003497 11004603 -155645693 + Lx8 LINE L1 6274 7464 -9 5 668 2412 149 66 2 chrX 11004658 11005054 -155645242 + MTC LTR MaLR 1 421 0 1 668 957 264 32 0 chrX 11005071 11005287 -155645009 + ID_B1 SINE B4 2 224 0 1 668 663 181 94 8 chrX 11005291 11005419 -155644877 + B1_Mur2 SINE Alu 2 140 -9 1 668 291 304 0 28 chrX 11005509 11005580 -155644716 + ID4 SINE ID 15 83 0 1 668 592 287 0 0 chrX 11006390 11006512 -155643784 - B1F1 SINE Alu -22 127 6 1 668 365 316 50 0 chrX 11007545 11007684 -155642612 + MLT1A LTR MaLR 1 146 -228 1 668 338 253 0 42 chrX 11007687 11007782 -155642514 + GA-rich Low_complexity Low_complexity 2 92 0 1 668 245 316 25 12 chrX 11007830 11007910 -155642386 - B4A SINE B4 -30 262 182 1 668 289 258 15 15 chrX 11007938 11008005 -155642291 - B4A SINE B4 -202 90 24 1 669 451 309 131 80 chrX 11010833 11011297 -155638999 + MLT1F LTR MaLR 37 543 -5 1 669 333 239 75 132 chrX 11011319 11011478 -155638818 - Tigger14a DNA MER2_type -101 223 74 2 669 301 360 21 21 chrX 11011961 11012103 -155638193 + MIR SINE MIR 83 224 -38 2 669 183 304 0 0 chrX 11013114 11013160 -155637136 - L2a LINE L2 -6 3420 3375 2 669 559 375 53 33 chrX 11013251 11013672 -155636624 + LTR16B2 LTR ERVL 1 443 -20 2 669 281 268 235 10 chrX 11014591 11014689 -155635607 + MIRb SINE MIR 94 213 -55 2 669 501 17 0 0 chrX 11015152 11015210 -155635086 + (TC)n Simple_repeat Simple_repeat 2 59 0 2 669 261 0 0 0 chrX 11015210 11015238 -155635058 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 669 1238 212 99 42 chrX 11015547 11015901 -155634395 - MTEb LTR MaLR -3 376 3 2 669 801 298 76 73 chrX 11015952 11016281 -155634015 + MLT1J LTR MaLR 33 362 -150 2 669 447 375 75 31 chrX 11016453 11016681 -155633615 - LTR16A LTR ERVL -12 439 202 2 669 191 286 39 108 chrX 11016748 11016850 -155633446 + MIRm SINE MIR 4 98 -178 3 669 540 304 40 26 chrX 11016873 11017025 -155633271 + RSINE1 SINE B4 4 157 -8 3 669 273 29 0 0 chrX 11017029 11017063 -155633233 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 669 291 176 35 129 chrX 11017389 11017474 -155632822 + MIRc SINE MIR 83 159 -109 3 669 290 378 36 15 chrX 11018091 11018228 -155632068 + MIR SINE MIR 36 175 -87 3 669 818 296 39 21 chrX 11018553 11018836 -155631460 - B4A SINE B4 -2 290 3 3 669 360 322 0 0 chrX 11018978 11019068 -155631228 - RSINE1 SINE B4 -65 100 11 3 669 319 257 0 13 chrX 11019689 11019764 -155630532 + ID4 SINE ID 3 76 -7 3 669 233 333 59 59 chrX 11021236 11021338 -155628958 - RMER21B LTR ERV1 -125 717 616 3 669 235 285 93 71 chrX 11021926 11022066 -155628230 - MER67B LTR ERV1 -222 439 297 3 669 356 253 0 0 chrX 11022624 11022707 -155627589 + RMER6-int LTR ERVK 2742 2824 -353 4 669 1517 194 75 52 chrX 11022716 11023064 -155627232 + RLTR20B3 LTR ERVK 163 518 -59 4 669 234 208 0 19 chrX 11023099 11023153 -155627143 + MIRc SINE MIR 70 122 -146 4 669 275 382 76 0 chrX 11023588 11023732 -155626564 + LTR16C LTR ERVL 148 302 -187 4 669 272 265 48 0 chrX 11023778 11023861 -155626435 + LTR16C LTR ERVL 451 537 -1 4 669 323 315 8 61 chrX 11024112 11024244 -155626052 - YREP_Mm Unknown Unknown -1488 324 200 4 669 512 343 7 0 chrX 11024128 11024268 -155626028 + ID_B1 SINE B4 84 224 0 4 669 246 364 34 0 chrX 11024786 11024874 -155625422 + MER81 DNA AcHobo 23 113 -1 4 669 1057 240 11 60 chrX 11025299 11025565 -155624731 + B4A SINE B4 2 254 -38 4 669 397 290 67 72 chrX 11025671 11025879 -155624417 - LTR16C LTR ERVL -5 484 278 4 669 949 221 45 10 chrX 11026173 11026374 -155623922 + B3 SINE B2 9 216 0 4 669 267 273 39 13 chrX 11026862 11026940 -155623356 - MER46C DNA MER2_type -1 337 258 5 669 363 244 189 12 chrX 11026952 11027118 -155623178 + B4A SINE B4 3 231 -61 5 669 490 278 17 0 chrX 11027118 11027233 -155623063 + RSINE1 SINE B4 3 119 -46 5 669 229 330 40 56 chrX 11027227 11027352 -155622944 - MER46C DNA MER2_type -156 182 60 5 669 236 320 0 0 chrX 11027923 11028001 -155622295 - MER5A DNA MER1_type -103 86 9 5 669 240 0 49 24 chrX 11028386 11028427 -155621869 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 5 669 324 299 144 14 chrX 11028626 11028772 -155621524 + L1ME3 LINE L1 5954 6118 -44 5 669 474 132 0 0 chrX 11029759 11029835 -155620461 + (TC)n Simple_repeat Simple_repeat 2 77 0 5 669 291 325 0 0 chrX 11029835 11029915 -155620381 + MLT1H LTR MaLR 217 296 -253 5 669 700 129 355 5 chrX 11029916 11030113 -155620183 - RMER4B LTR ERVK 0 585 319 5 669 1007 16 0 8 chrX 11030113 11030180 -155620116 + (TTC)n Simple_repeat Simple_repeat 1 67 0 5 669 1128 94 0 22 chrX 11030180 11030364 -155619932 + (TCC)n Simple_repeat Simple_repeat 1 180 0 6 669 1007 16 0 8 chrX 11030364 11030418 -155619878 + (TTC)n Simple_repeat Simple_repeat 1 54 0 6 669 1584 164 134 0 chrX 11030442 11030497 -155619799 - RMER4B LTR ERVK -246 339 285 5 669 180 0 0 0 chrX 11030497 11030517 -155619779 + (CCAA)n Simple_repeat Simple_repeat 1 20 0 6 669 1584 164 134 0 chrX 11030517 11030759 -155619537 - RMER4B LTR ERVK -301 284 3 5 669 420 229 123 65 chrX 11030833 11030987 -155619309 - RMER30 DNA MER1_type -30 172 10 6 669 525 315 94 73 chrX 11030993 11031431 -155618865 - MLT2B5 LTR ERVL -113 604 158 6 669 349 281 74 8 chrX 11032635 11032757 -155617539 + MLT1I LTR MaLR 5 134 -277 6 669 865 267 75 34 chrX 11033005 11033300 -155616996 + ORR1E LTR MaLR 53 359 0 6 669 241 229 66 88 chrX 11033387 11033478 -155616818 - Charlie4z DNA MER1_type -20 147 59 6 669 455 330 67 114 chrX 11033485 11033783 -155616513 - B4 SINE B4 0 292 9 6 669 2818 70 16 3 chrX 11033828 11034203 -155616093 - L1_Mus4 LINE L1 -4 6632 6253 6 669 1433 115 0 0 chrX 11034205 11034414 -155615882 + L1_Mur2 LINE L1 5053 5261 -616 7 669 3220 45 128 5 chrX 11034514 11034937 -155615359 - IAPLTR2_Mm LTR ERVK 0 475 1 7 669 1448 158 207 20 chrX 11037336 11037679 -155612617 - MTD LTR MaLR 0 419 13 7 669 311 332 48 101 chrX 11038193 11038461 -155611835 - ORR1E LTR MaLR -10 349 96 7 669 716 260 145 20 chrX 11038568 11038767 -155611529 + B4 SINE B4 3 226 -66 7 669 1015 250 18 5 chrX 11038767 11038988 -155611308 + B4A SINE B4 1 224 -68 7 669 360 64 0 0 chrX 11039100 11039147 -155611149 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 669 321 214 0 0 chrX 11039158 11039256 -155611040 + GA-rich Low_complexity Low_complexity 2 99 0 7 669 286 113 89 0 chrX 11039852 11039976 -155610320 + (TG)n Simple_repeat Simple_repeat 1 135 0 7 669 445 105 60 24 chrX 11039988 11040154 -155610142 + (TG)n Simple_repeat Simple_repeat 1 172 0 7 669 730 266 96 46 chrX 11040154 11040351 -155609945 - B4 SINE B4 0 292 86 7 669 879 136 0 0 chrX 11040464 11040611 -155609685 + (GGA)n Simple_repeat Simple_repeat 3 149 0 8 669 476 187 174 31 chrX 11041713 11041854 -155608442 + B4A SINE B4 2 153 -71 8 669 375 141 0 0 chrX 11041854 11041918 -155608378 + (CA)n Simple_repeat Simple_repeat 1 64 0 8 669 195 42 0 0 chrX 11041927 11041951 -155608345 + (GGGAGA)n Simple_repeat Simple_repeat 1 24 0 8 669 354 197 0 0 chrX 11042397 11042463 -155607833 - B4A SINE B4 -226 66 1 7 669 210 321 19 0 chrX 11042493 11042546 -155607750 + B4A SINE B4 65 118 -174 8 669 286 340 0 21 chrX 11042560 11042665 -155607631 + MLT1H LTR MaLR 86 191 -358 8 669 277 316 38 12 chrX 11043038 11043118 -155607178 - Tigger7 DNA MER2_type -1 2490 2409 8 669 331 283 122 9 chrX 11043127 11043234 -155607062 - Tigger7 DNA MER2_type -2372 119 1 8 669 500 297 6 18 chrX 11043265 11043433 -155606863 + MER5A DNA MER1_type 22 187 -2 8 669 342 0 0 0 chrX 11043647 11043685 -155606611 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 669 218 191 20 60 chrX 11043947 11043997 -155606299 + ID SINE ID 13 60 -164 8 669 657 119 0 0 chrX 11044016 11044117 -155606179 + (TAGA)n Simple_repeat Simple_repeat 2 102 0 9 669 351 200 79 112 chrX 11044117 11044269 -155606027 + MER53 DNA hAT 45 191 -2 9 669 566 287 82 44 chrX 11045301 11045440 -155604856 - ID_B1 SINE B4 -35 189 42 9 669 1294 192 62 98 chrX 11045440 11045636 -155604660 + ORR1D1 LTR MaLR 1 166 -208 9 669 506 16 16 0 chrX 11045636 11045699 -155604597 + (TC)n Simple_repeat Simple_repeat 1 64 0 9 669 1294 192 62 98 chrX 11045699 11045889 -155604407 + ORR1D1 LTR MaLR 167 373 -1 9 669 566 287 82 44 chrX 11045889 11045931 -155604365 - ID SINE ID -183 41 1 9 669 586 304 48 96 chrX 11046148 11046515 -155603781 - MLT1A LTR MaLR -17 348 15 9 669 464 283 90 33 chrX 11046586 11046831 -155603465 - MER5C DNA MER1_type -7 306 48 9 669 921 316 24 17 chrX 11046832 11047119 -155603177 + B4A SINE B4 2 290 -2 9 669 363 289 10 0 chrX 11047609 11047706 -155602590 + MIRc SINE MIR 109 206 -62 9 669 457 295 17 23 chrX 11047853 11048030 -155602266 + L1MC4 LINE L1 7637 7812 -230 9 669 537 269 48 5 chrX 11048256 11048442 -155601854 + ID_B1 SINE B4 2 224 0 1 669 264 214 0 18 chrX 11048726 11048783 -155601513 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 669 370 200 41 146 chrX 11048884 11048905 -155601391 + MT2B LTR ERVL 148 155 -446 1 669 869 143 0 81 chrX 11048905 11049065 -155601231 + B1_Mus2 SINE Alu 1 147 0 1 669 270 73 0 0 chrX 11049089 11049130 -155601166 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 669 689 103 9 9 chrX 11049148 11049256 -155601040 - ORR1D1 LTR MaLR -266 108 1 1 669 1426 256 16 35 chrX 11049438 11049810 -155600486 + MTE2b LTR MaLR 15 379 0 1 669 704 159 290 12 chrX 11049974 11050136 -155600160 + MTD LTR MaLR 2 208 -211 1 669 233 259 47 128 chrX 11050009 11050138 -155600158 - RMER17A LTR ERVK -217 534 412 1 669 1273 65 47 12 chrX 11050138 11050308 -155599988 + B2_Mm2 SINE B2 1 176 -19 1 669 233 259 47 128 chrX 11050308 11050435 -155599861 - RMER17A LTR ERVK -340 411 299 1 669 493 295 31 31 chrX 11051086 11051247 -155599049 + RSINE1 SINE B4 5 165 0 1 669 1152 57 0 7 chrX 11051388 11051522 -155598774 + B1_Mus2 SINE Alu 2 135 -12 1 669 950 80 7 0 chrX 11051522 11051659 -155598637 + (GAAA)n Simple_repeat Simple_repeat 2 139 0 1 669 373 331 31 12 chrX 11051993 11052155 -155598141 + MLT1N2 LTR MaLR 390 554 -8 1 669 392 278 168 41 chrX 11052225 11052540 -155597756 - L1ME3 LINE L1 -107 6055 5701 1 669 183 100 0 0 chrX 11052607 11052637 -155597659 + (T)n Simple_repeat Simple_repeat 1 30 0 1 669 523 291 92 7 chrX 11053233 11053375 -155596921 - RSINE1 SINE B4 0 165 12 1 669 237 244 0 0 chrX 11053406 11053451 -155596845 + MIR SINE MIR 122 166 -96 1 669 1112 247 30 30 chrX 11053949 11054249 -155596047 - RMER15 LTR ERVL -5 570 271 1 669 215 333 14 0 chrX 11054384 11054456 -155595840 + B1_Mus1 SINE Alu 6 78 -70 1 669 240 316 10 48 chrX 11054617 11054720 -155595576 - MLT1A1 LTR MaLR -8 400 302 1 669 243 315 88 26 chrX 11054928 11055042 -155595254 - ORR1E LTR MaLR -218 141 21 1 669 308 293 92 20 chrX 11055057 11055252 -155595044 - L1MC5 LINE L1 -87 7874 7666 1 669 207 69 0 0 chrX 11055648 11055677 -155594619 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 1 669 953 139 42 0 chrX 11055680 11055824 -155594472 - B1_Mur4 SINE Alu 0 150 1 1 669 758 208 6 19 chrX 11056368 11056525 -155593771 + RSINE1 SINE B4 3 157 -8 1 669 449 230 76 57 chrX 11056788 11056945 -155593351 + MER5A1 DNA MER1_type 3 162 -4 1 669 250 301 0 35 chrX 11057758 11057844 -155592452 + GA-rich Low_complexity Low_complexity 4 86 0 1 669 2144 174 64 3 chrX 11057936 11058327 -155591969 - MTD LTR MaLR 0 419 5 1 669 1175 202 5 18 chrX 11058335 11058552 -155591744 - ID_B1 SINE B4 -10 214 1 1 669 352 333 115 23 chrX 11059703 11059921 -155590375 + LTR16C LTR ERVL 249 486 -3 1 669 439 288 11 86 chrX 11060044 11060130 -155590166 + B4A SINE B4 1 72 -220 1 669 235 308 8 171 chrX 11060130 11060259 -155590037 + PB1D7 SINE Alu 1 108 -12 1 669 728 182 8 31 chrX 11060389 11060519 -155589777 + B3 SINE B2 2 128 -88 1 669 279 0 0 0 chrX 11060519 11060550 -155589746 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 1 669 459 297 26 36 chrX 11060550 11060611 -155589685 + B2_Mm1a SINE B2 133 191 -2 1 669 389 313 157 13 chrX 11061359 11061595 -155588701 - MLT1H2 LTR MaLR -214 275 6 1 669 320 305 85 93 chrX 11061760 11062006 -155588290 - MLT1K LTR MaLR -27 568 325 1 669 629 180 18 0 chrX 11062026 11062137 -155588159 + B1_Mur3 SINE Alu 32 144 -5 1 669 204 135 0 0 chrX 11062137 11062174 -155588122 + (TAAG)n Simple_repeat Simple_repeat 3 39 0 1 669 771 270 58 68 chrX 11062774 11063068 -155587228 + B4 SINE B4 2 292 0 1 669 253 330 30 30 chrX 11064784 11064884 -155585412 + MER5B DNA MER1_type 4 103 -75 1 669 267 273 79 35 chrX 11064944 11065058 -155585238 - MLT1I LTR MaLR 0 411 293 1 669 1879 169 86 25 chrX 11065344 11065719 -155584577 - MTD LTR MaLR 0 419 18 1 669 207 69 0 0 chrX 11065719 11065748 -155584548 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 669 1879 169 86 25 chrX 11065748 11065766 -155584530 - MTD LTR MaLR -402 17 2 1 669 518 256 0 41 chrX 11066119 11066241 -155584055 + PB1D10 SINE Alu 1 117 0 1 669 224 288 0 92 chrX 11066252 11066317 -155583979 + ID4_ SINE ID 2 60 -23 1 669 312 250 145 44 chrX 11066528 11066552 -155583744 - B2_Mm1a SINE B2 -9 184 158 1 669 414 0 0 0 chrX 11066552 11066598 -155583698 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 669 477 0 0 0 chrX 11066598 11066650 -155583646 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 669 497 254 139 41 chrX 11066650 11066792 -155583504 - B3A SINE B2 -36 157 1 1 669 396 0 0 0 chrX 11068708 11068752 -155581544 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 669 621 0 0 0 chrX 11068772 11068841 -155581455 + (TC)n Simple_repeat Simple_repeat 2 70 0 1 669 265 256 126 4 chrX 11069604 11069730 -155580566 + MamRep38 DNA hAT 1 154 -141 1 669 243 244 126 56 chrX 11070390 11070533 -155579763 + MIRc SINE MIR 98 250 -18 1 669 213 39 0 0 chrX 11070618 11070644 -155579652 + (CGGGGG)n Simple_repeat Simple_repeat 5 30 0 1 669 408 40 0 0 chrX 11070826 11070876 -155579420 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 669 429 20 0 0 chrX 11070990 11071040 -155579256 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 669 269 191 103 0 chrX 11072346 11072414 -155577882 + ORR1E LTR MaLR 36 110 -249 1 669 509 214 98 84 chrX 11072545 11072688 -155577608 + B1_Mm SINE Alu 3 147 0 1 669 251 296 58 90 chrX 11072722 11072878 -155577418 + MLT1A1 LTR MaLR 215 395 -13 1 669 610 356 54 18 chrX 11072891 11073171 -155577125 + MLT1H LTR MaLR 25 314 -235 1 669 428 318 13 13 chrX 11073603 11073759 -155576537 + GA-rich Low_complexity Low_complexity 4 159 0 1 669 238 310 57 57 chrX 11073952 11074075 -155576221 + B4 SINE B4 83 205 -87 1 669 434 284 9 0 chrX 11073970 11074079 -155576217 + PB1D9 SINE Alu 10 119 -1 1 669 378 0 0 0 chrX 11074079 11074121 -155576175 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 669 867 177 0 0 chrX 11074119 11074283 -155576013 + GA-rich Low_complexity Low_complexity 2 165 0 1 669 877 250 290 39 chrX 11075121 11075450 -155574846 - MTB_Mm LTR MaLR -8 413 2 1 669 198 0 0 0 chrX 11075450 11075472 -155574824 + (CAA)n Simple_repeat Simple_repeat 3 24 0 1 669 486 298 93 83 chrX 11075701 11075990 -155574306 + B4A SINE B4 1 292 0 1 669 252 100 0 0 chrX 11076038 11076078 -155574218 + (GGGA)n Simple_repeat Simple_repeat 2 41 0 1 669 273 57 0 0 chrX 11076691 11076726 -155573570 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1 669 1014 306 86 57 chrX 11076803 11077223 -155573073 - MLT2B1 LTR ERVL -86 434 3 1 669 341 270 106 45 chrX 11078214 11078346 -155571950 - B4A SINE B4 -152 140 1 1 669 485 269 0 0 chrX 11078997 11079101 -155571195 + MLT1A LTR MaLR 60 163 -202 1 669 1129 104 49 0 chrX 11079105 11079269 -155571027 + B2_Mm2 SINE B2 20 191 -4 1 669 1087 235 114 89 chrX 11079274 11079782 -155570514 + L1MA4 LINE L1 5476 6024 -276 1 669 323 247 0 0 chrX 11079783 11079868 -155570428 + L1MA4 LINE L1 6209 6293 -7 1 669 489 272 58 64 chrX 11079880 11080053 -155570243 + MLT1A LTR MaLR 152 323 -51 1 669 1039 282 71 87 chrX 11080097 11080590 -155569706 + MLT-int LTR MaLR 7 491 -1244 1 669 748 233 7 2 chrX 11081086 11081250 -155569046 + MLT1A0 LTR MaLR 203 372 -2 1 669 806 326 130 33 chrX 11081253 11081767 -155568529 + MLT1G3 LTR MaLR 1 564 -31 1 669 238 312 0 0 chrX 11081980 11082060 -155568236 + (GGTTG)n Simple_repeat Simple_repeat 5 84 0 1 669 340 293 78 20 chrX 11082516 11082669 -155567627 + MIRb SINE MIR 68 229 -33 1 669 238 182 0 35 chrX 11082849 11082906 -155567390 + T-rich Low_complexity Low_complexity 4 58 0 1 669 1308 79 51 0 chrX 11082927 11083105 -155567191 + B2_Mm2 SINE B2 2 188 -7 1 669 1247 28 0 0 chrX 11083194 11083336 -155566960 - B1_Mus2 SINE Alu -5 142 1 1 669 270 334 124 21 chrX 11083395 11083735 -155566561 + L2b LINE L2 2848 3221 -154 1 669 228 312 31 0 chrX 11083704 11083768 -155566528 + L2b LINE L2 3345 3410 -16 1 669 340 323 12 0 chrX 11083883 11084047 -155566249 + (CA)n Simple_repeat Simple_repeat 1 166 0 1 669 444 67 0 0 chrX 11084136 11084196 -155566100 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 669 1005 92 0 0 chrX 11084222 11084364 -155565932 + (TCTA)n Simple_repeat Simple_repeat 2 143 0 1 669 476 369 11 11 chrX 11084528 11084709 -155565587 + MIR SINE MIR 14 194 -68 1 669 307 260 13 0 chrX 11085008 11085085 -155565211 + MIR3 SINE MIR 126 203 -5 1 669 447 315 77 22 chrX 11085192 11085374 -155564922 - MIR3 SINE MIR -3 205 14 1 669 325 333 39 55 chrX 11085539 11085720 -155564576 - MIRb SINE MIR -37 231 54 1 669 251 296 144 59 chrX 11086198 11086385 -155563911 - MLT1H LTR MaLR -346 203 1 1 669 687 285 37 9 chrX 11086409 11086625 -155563671 + ID_B1 SINE B4 1 222 -2 1 669 225 347 0 0 chrX 11086986 11087061 -155563235 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 669 239 138 35 0 chrX 11087085 11087143 -155563153 + (CAGAGA)n Simple_repeat Simple_repeat 4 63 0 1 669 336 111 0 0 chrX 11088412 11088466 -155561830 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 1 669 202 109 43 21 chrX 11088466 11088513 -155561783 + GA-rich Low_complexity Low_complexity 3 50 0 1 669 1046 108 12 0 chrX 11088514 11088681 -155561615 + (GAAA)n Simple_repeat Simple_repeat 1 169 0 1 669 670 296 86 30 chrX 11088681 11088949 -155561347 + B4A SINE B4 4 286 -6 1 669 357 176 294 0 chrX 11089279 11089381 -155560915 - B1_Mur4 SINE Alu -7 143 12 2 669 234 237 145 0 chrX 11089320 11089396 -155560900 - B4A SINE B4 -125 167 81 2 669 186 209 0 0 chrX 11089399 11089442 -155560854 + CT-rich Low_complexity Low_complexity 2 44 0 2 669 23 0 0 0 chrX 11090032 11090055 -155560241 + AT_rich Low_complexity Low_complexity 1 23 0 2 669 210 37 0 0 chrX 11090893 11090920 -155559376 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 669 403 242 10 0 chrX 11090928 11091027 -155559269 - B4A SINE B4 -36 256 157 2 669 594 0 0 0 chrX 11092765 11092831 -155557465 + (TC)n Simple_repeat Simple_repeat 1 66 0 2 669 225 311 40 56 chrX 11092887 11093013 -155557283 + L1ME3A LINE L1 5917 6040 -133 2 669 673 252 0 0 chrX 11093034 11093173 -155557123 - RSINE1 SINE B4 -24 141 3 2 669 269 253 24 0 chrX 11093181 11093264 -155557032 + L1ME3A LINE L1 6050 6134 -39 2 669 342 222 16 8 chrX 11094800 11094927 -155555369 + CT-rich Low_complexity Low_complexity 4 131 0 2 669 386 280 65 58 chrX 11096273 11096463 -155553833 + ORR1E LTR MaLR 34 232 -152 2 669 1958 221 113 36 chrX 11097831 11098353 -155551943 + RMER2 LTR ERV1 1 562 -5 2 669 235 309 83 21 chrX 11098831 11098906 -155551390 + MIRm SINE MIR 28 108 -168 2 669 189 0 0 0 chrX 11098906 11098927 -155551369 + (CTAA)n Simple_repeat Simple_repeat 3 23 0 2 669 235 309 83 21 chrX 11098927 11098947 -155551349 + MIRm SINE MIR 109 128 -148 2 669 351 310 60 0 chrX 11099090 11099206 -155551090 + MER58B DNA MER1_type 219 341 0 2 669 490 271 25 0 chrX 11099261 11099383 -155550913 + B1F1 SINE Alu 3 127 -22 2 669 240 245 0 0 chrX 11099349 11099402 -155550894 + B1_Mur3 SINE Alu 65 117 -32 2 669 545 309 13 32 chrX 11099423 11099577 -155550719 + RSINE1 SINE B4 12 162 -3 2 669 383 276 20 20 chrX 11099631 11099731 -155550565 + RSINE1 SINE B4 3 102 -63 2 669 215 350 219 13 chrX 11099829 11100238 -155550058 - L2b LINE L2 -1 3374 2874 2 669 436 314 0 31 chrX 11100252 11100413 -155549883 + L1M2 LINE L1 5593 5748 -543 2 669 25 0 0 0 chrX 11100631 11100656 -155549640 + AT_rich Low_complexity Low_complexity 1 25 0 2 669 231 302 208 6 chrX 11101461 11101634 -155548662 + MLT1F1 LTR MaLR 359 566 -3 2 669 356 303 101 0 chrX 11101669 11101778 -155548518 + ID_B1 SINE B4 102 221 -3 2 669 1040 139 0 11 chrX 11101786 11101968 -155548328 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 2 669 318 277 63 63 chrX 11102019 11102177 -155548119 + HAL1-3A_ME LINE L1 2287 2444 -414 2 669 455 148 11 0 chrX 11102844 11102932 -155547364 + GA-rich Low_complexity Low_complexity 3 91 0 2 669 251 91 0 0 chrX 11103431 11103464 -155546832 + PB1D10 SINE Alu 73 105 -12 2 669 771 254 47 61 chrX 11103577 11103791 -155546505 - B3 SINE B2 -5 211 1 2 669 301 346 23 8 chrX 11104498 11104629 -155545667 - LTR16E1 LTR ERVL -15 523 391 2 669 270 0 0 0 chrX 11104629 11104659 -155545637 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 669 684 305 137 37 chrX 11104988 11105628 -155544668 + MER44D DNA MER2_type 1 705 0 2 669 325 321 94 84 chrX 11105663 11105938 -155544358 - MTEa LTR MaLR -5 354 77 2 669 455 232 0 83 chrX 11105989 11106097 -155544199 - MTEa LTR MaLR -280 99 1 2 669 387 0 0 0 chrX 11106678 11106721 -155543575 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 669 366 23 0 0 chrX 11106721 11106763 -155543533 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 669 522 210 0 0 chrX 11106764 11106883 -155543413 + (TA)n Simple_repeat Simple_repeat 2 120 0 2 669 489 110 0 0 chrX 11106975 11107048 -155543248 + (TC)n Simple_repeat Simple_repeat 2 74 0 2 669 699 259 78 0 chrX 11107227 11107393 -155542903 - B4 SINE B4 -2 290 112 2 669 295 200 0 0 chrX 11107414 11107464 -155542832 - B3 SINE B2 -166 50 1 2 669 290 262 75 0 chrX 11107499 11107579 -155542717 - B4 SINE B4 -206 86 1 2 669 228 340 73 92 chrX 11107580 11107752 -155542544 + L2a LINE L2 3202 3396 -30 2 669 198 384 67 34 chrX 11107818 11107996 -155542300 - MIRb SINE MIR -69 199 16 2 669 701 237 84 5 chrX 11108175 11108366 -155541930 + B3 SINE B2 5 210 -6 2 669 503 341 106 40 chrX 11108601 11108922 -155541374 + LTR16C LTR ERVL 110 451 -38 2 669 765 221 5 22 chrX 11109454 11109639 -155540657 - B3A SINE B2 -14 184 3 2 669 996 55 0 0 chrX 11109796 11109923 -155540373 + (TTTC)n Simple_repeat Simple_repeat 3 129 0 2 669 280 283 25 58 chrX 11111029 11111149 -155539147 - L2c LINE L2 0 3387 3272 2 669 944 222 0 0 chrX 11111557 11111737 -155538559 + B3A SINE B2 1 180 -18 2 669 36 77 0 0 chrX 11111778 11111856 -155538440 + AT_rich Low_complexity Low_complexity 1 78 0 2 669 277 300 53 50 chrX 11111856 11112137 -155538159 + L1MC5 LINE L1 7580 7861 -100 2 669 588 295 16 0 chrX 11112527 11112656 -155537640 + RSINE1 SINE B4 7 137 -28 2 669 566 316 125 38 chrX 11113246 11113565 -155536731 - MLT1C LTR MaLR -3 464 118 2 669 1017 65 0 0 chrX 11113947 11114085 -155536211 + (TC)n Simple_repeat Simple_repeat 1 138 0 2 669 585 278 190 36 chrX 11114785 11115117 -155535179 + MLT1C LTR MaLR 85 467 0 2 669 483 33 0 0 chrX 11115211 11115272 -155535024 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 669 537 16 0 0 chrX 11115272 11115333 -155534963 + (GA)n Simple_repeat Simple_repeat 2 63 0 2 669 216 163 0 0 chrX 11115931 11115974 -155534322 + CT-rich Low_complexity Low_complexity 2 44 0 2 669 958 242 48 50 chrX 11116614 11117003 -155533293 + MLT1C LTR MaLR 8 464 -3 2 669 311 318 30 30 chrX 11117622 11117755 -155532541 + B1F SINE Alu 3 135 -14 2 669 983 238 52 0 chrX 11117785 11117978 -155532318 + B3 SINE B2 10 212 -4 2 669 902 284 87 94 chrX 11118075 11118173 -155532123 + MLT1B LTR MaLR 1 101 -289 2 669 1937 204 45 7 chrX 11118173 11118577 -155531719 + MTC LTR MaLR 3 421 0 2 669 902 284 87 94 chrX 11118577 11118644 -155531652 + MLT1B LTR MaLR 102 177 -213 2 669 1444 79 16 0 chrX 11118644 11118833 -155531463 + B2_Mm2 SINE B2 1 192 -3 2 669 902 284 87 94 chrX 11118833 11119059 -155531237 + MLT1B LTR MaLR 178 390 0 2 669 591 280 128 11 chrX 11119507 11119695 -155530601 + B4 SINE B4 9 218 -74 2 669 1058 55 14 0 chrX 11119696 11119841 -155530455 + (GAAA)n Simple_repeat Simple_repeat 3 149 0 2 669 1900 51 4 0 chrX 11119841 11120077 -155530219 + L1Md_F2 LINE L1 6346 6582 0 2 669 709 141 41 0 chrX 11120109 11120230 -155530066 - L1_Mur3 LINE L1 -1601 4279 4154 2 669 205 337 21 0 chrX 11120268 11120363 -155529933 + (CATATA)n Simple_repeat Simple_repeat 4 100 0 2 669 550 268 32 0 chrX 11120640 11120763 -155529533 - MLT1D LTR MaLR -103 402 276 2 669 295 331 61 102 chrX 11120764 11121143 -155529153 - MLT1A1 LTR MaLR 0 408 3 2 669 528 246 65 59 chrX 11121193 11121258 -155529038 - MLT1D LTR MaLR -271 234 168 2 669 1052 230 24 0 chrX 11121258 11121467 -155528829 + ID_B1 SINE B4 3 216 -8 2 669 528 246 65 59 chrX 11121467 11121587 -155528709 - MLT1D LTR MaLR -338 167 48 2 669 183 42 0 0 chrX 11122062 11122086 -155528210 + (CCA)n Simple_repeat Simple_repeat 1 24 0 2 669 774 346 96 41 chrX 11122539 11122979 -155527317 + LTR16C LTR ERVL 21 484 -5 2 669 402 21 0 0 chrX 11123411 11123458 -155526838 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 669 1039 207 7 102 chrX 11123461 11123746 -155526550 - B4A SINE B4 -33 259 2 2 669 354 356 134 27 chrX 11123781 11124073 -155526223 + LTR16C LTR ERVL 127 449 -40 2 669 880 192 29 33 chrX 11124904 11125114 -155525182 + L1MA8 LINE L1 6010 6218 -73 2 669 265 260 68 14 chrX 11125114 11125188 -155525108 + MLT1A1 LTR MaLR 1 78 -287 2 669 354 45 0 0 chrX 11125249 11125293 -155525003 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 669 555 244 11 11 chrX 11125338 11125475 -155524821 + MLT1A1 LTR MaLR 233 408 0 2 669 648 339 43 13 chrX 11125605 11125838 -155524458 + MLT1G1 LTR MaLR 338 577 -2 2 669 346 331 22 0 chrX 11125897 11126033 -155524263 + MLT1J2 LTR MaLR 1 139 -309 2 669 352 247 13 0 chrX 11126060 11126137 -155524159 + B1_Mur1 SINE Alu 72 149 0 2 669 262 258 0 0 chrX 11126219 11126281 -155524015 + MLT1J2 LTR MaLR 387 448 0 2 669 553 339 91 54 chrX 11129437 11129899 -155520397 + LTR16B1 LTR ERVL 1 479 -1 2 669 213 39 0 0 chrX 11130378 11130404 -155519892 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 2 669 271 298 39 45 chrX 11130835 11130991 -155519305 - MIR SINE MIR -66 196 43 2 669 224 157 78 91 chrX 11132253 11132330 -155517966 + B1F SINE Alu 71 146 -3 2 669 495 278 188 39 chrX 11132267 11132522 -155517774 - MER45C DNA Tip100 -7 946 654 2 669 489 221 215 27 chrX 11132541 11132687 -155517609 - MER45C DNA Tip100 -684 269 96 2 669 885 292 9 31 chrX 11132687 11132910 -155517386 + B4 SINE B4 3 220 -72 2 669 437 192 0 14 chrX 11132943 11133017 -155517279 + RSINE1 SINE B4 9 81 -84 2 669 627 108 0 0 chrX 11133027 11133120 -155517176 + (GA)n Simple_repeat Simple_repeat 2 94 0 2 669 623 258 136 69 chrX 11133556 11133952 -155516344 - MLT1C LTR MaLR 0 390 3 2 669 279 274 86 31 chrX 11134012 11134140 -155516156 - MER5A1 DNA MER1_type 0 166 32 2 669 339 247 0 38 chrX 11134300 11134380 -155515916 - MLT1M LTR MaLR -454 218 142 2 669 907 119 16 28 chrX 11134876 11135058 -155515238 + C-rich Low_complexity Low_complexity 1 180 0 2 669 339 224 163 12 chrX 11135123 11135209 -155515087 - B4A SINE B4 -55 237 139 2 669 252 209 191 34 chrX 11135343 11135432 -155514864 + Tigger5 DNA MER2_type 29 131 -2275 2 669 467 312 25 26 chrX 11135629 11135818 -155514478 - MLT1H LTR MaLR -201 243 63 2 669 1162 69 0 0 chrX 11135824 11135968 -155514328 - B1_Mus1 SINE Alu 0 148 5 2 669 552 255 34 34 chrX 11136741 11136887 -155513409 + B3A SINE B2 2 147 -51 2 669 222 37 0 0 chrX 11136893 11136920 -155513376 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 669 441 0 0 0 chrX 11136920 11136968 -155513328 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 669 360 0 0 0 chrX 11136980 11137020 -155513276 + (TC)n Simple_repeat Simple_repeat 2 41 0 3 669 459 0 0 0 chrX 11137020 11137070 -155513226 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 669 466 289 74 11 chrX 11137122 11137311 -155512985 + MIRb SINE MIR 60 260 -8 3 669 873 297 19 11 chrX 11137321 11137583 -155512713 - MER46C DNA MER2_type -6 332 69 3 669 513 84 0 0 chrX 11138227 11138298 -155511998 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 669 304 250 91 0 chrX 11138767 11138855 -155511441 - LTR16C LTR ERVL 0 489 394 3 669 1044 256 69 92 chrX 11138859 11139251 -155511045 - MLT1B LTR MaLR -1 389 7 3 669 522 0 0 0 chrX 11139717 11139775 -155510521 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 669 1008 286 0 62 chrX 11140602 11140911 -155509385 + B4 SINE B4 3 292 0 3 669 257 333 47 3 chrX 11140919 11141064 -155509232 + MIRb SINE MIR 53 203 -59 3 670 374 311 32 32 chrX 11142661 11142817 -155507479 - MLT1H LTR MaLR -2 547 392 3 670 342 315 29 34 chrX 11142896 11143076 -155507220 - MLT1H LTR MaLR -313 176 37 3 670 204 382 38 8 chrX 11143107 11143239 -155507057 - MIR SINE MIR -87 175 40 3 670 369 386 136 11 chrX 11143276 11143658 -155506638 - L4 LINE RTE -559 1470 1041 3 670 624 244 56 25 chrX 11143746 11143906 -155506390 - RSINE1 SINE B4 0 165 1 3 670 834 296 5 18 chrX 11144143 11144361 -155505935 + B4 SINE B4 13 227 -65 3 670 465 263 0 0 chrX 11144361 11144456 -155505840 + B4A SINE B4 1 95 -197 3 670 488 266 18 9 chrX 11144467 11144577 -155505719 + RSINE1 SINE B4 47 157 -8 3 670 303 113 0 0 chrX 11144580 11144633 -155505663 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 3 670 407 250 0 12 chrX 11144648 11144733 -155505563 + B4A SINE B4 209 292 0 3 670 319 338 0 0 chrX 11144774 11144848 -155505448 + B4 SINE B4 217 290 -2 3 670 211 239 96 27 chrX 11145784 11145857 -155504439 - MER5A DNA MER1_type -5 184 107 3 670 754 174 25 100 chrX 11145917 11146077 -155504219 - B1_Mur2 SINE Alu -1 148 1 3 670 497 330 83 36 chrX 11146108 11146385 -155503911 + B4 SINE B4 2 291 -1 3 670 252 263 85 24 chrX 11146658 11146741 -155503555 + B4A SINE B4 34 121 -171 3 670 351 0 0 0 chrX 11146743 11146782 -155503514 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 670 301 301 93 99 chrX 11146965 11147045 -155503251 + B4A SINE B4 5 86 -206 3 670 1277 78 6 0 chrX 11147045 11147224 -155503072 + (GAAAA)n Simple_repeat Simple_repeat 1 180 0 3 670 301 301 93 99 chrX 11147224 11147305 -155502991 + B4A SINE B4 87 165 -127 3 670 225 0 0 0 chrX 11147377 11147402 -155502894 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 670 234 0 0 0 chrX 11147402 11147427 -155502869 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 670 819 191 126 14 chrX 11147628 11147835 -155502461 - MLT2B4 LTR ERVL -325 231 2 3 670 1078 266 88 18 chrX 11149994 11150323 -155499973 - ORR1E LTR MaLR -4 355 4 3 670 220 279 115 0 chrX 11151069 11151130 -155499166 - AluG_3 SINE Alu -86 225 158 3 670 317 206 15 0 chrX 11151213 11151281 -155499015 - MER5A DNA MER1_type -94 95 27 3 670 444 19 0 0 chrX 11151506 11151559 -155498737 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 670 1639 172 171 6 chrX 11151909 11152254 -155498042 - MTD LTR MaLR -17 402 1 3 670 271 312 0 30 chrX 11152376 11152442 -155497854 + MER63D DNA AcHobo 316 379 -682 3 670 1250 48 0 0 chrX 11152575 11152722 -155497574 + B1_Mm SINE Alu 1 147 0 3 670 474 18 0 0 chrX 11152728 11152783 -155497513 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 3 670 336 48 0 0 chrX 11153194 11153236 -155497060 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 670 208 128 42 21 chrX 11155302 11155350 -155494946 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 3 670 231 250 0 68 chrX 11156159 11156232 -155494064 + MT2B2 LTR ERVL 183 250 -334 3 670 328 147 118 0 chrX 11156177 11156245 -155494051 + PB1 SINE Alu 43 118 -9 3 670 180 0 0 0 chrX 11156655 11156675 -155493621 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 670 530 231 77 0 chrX 11156784 11156914 -155493382 + B1_Mur1 SINE Alu 1 140 -9 3 670 576 248 67 147 chrX 11157153 11157465 -155492831 + ORR1E LTR MaLR 38 324 -35 3 670 296 309 31 10 chrX 11157454 11157552 -155492744 + MLT1J1 LTR MaLR 177 276 -168 3 670 884 117 141 5 chrX 11157575 11157773 -155492523 + RMER17C LTR ERVK 1 225 -185 3 670 248 0 0 30 chrX 11158131 11158164 -155492132 + (CAAA)n Simple_repeat Simple_repeat 3 34 0 3 670 376 331 82 60 chrX 11158547 11158730 -155491566 + B3A SINE B2 1 187 -11 3 670 573 212 306 0 chrX 11158778 11158938 -155491358 + B3 SINE B2 2 210 -6 3 670 476 211 15 23 chrX 11158946 11159077 -155491219 + L1MB7 LINE L1 4730 4859 -1287 3 670 4322 55 2 4 chrX 11159087 11159621 -155490675 - L1Md_F2 LINE L1 0 6582 6050 3 670 3645 42 0 0 chrX 11159621 11160050 -155490246 + L1Md_F2 LINE L1 5620 6048 -534 3 670 870 281 80 13 chrX 11160081 11160415 -155489881 + L1MB7 LINE L1 4908 5264 -882 3 670 333 68 0 0 chrX 11160415 11160459 -155489837 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 670 870 253 17 28 chrX 11160459 11160627 -155489669 + L1MB7 LINE L1 5265 5438 -740 3 670 818 253 21 134 chrX 11160627 11160956 -155489340 + B4 SINE B4 1 292 0 3 670 649 251 14 28 chrX 11160956 11161008 -155489288 + L1MB7 LINE L1 5439 5489 -689 3 670 791 172 0 0 chrX 11161015 11161137 -155489159 + B3 SINE B2 6 127 -89 3 670 254 343 124 22 chrX 11161019 11161156 -155489140 + RSINE1 SINE B4 11 161 -4 3 670 207 0 0 0 chrX 11161157 11161180 -155489116 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 3 670 1143 82 0 0 chrX 11161248 11161395 -155488901 - B1_Mus1 SINE Alu 0 148 2 3 670 389 20 0 20 chrX 11161404 11161455 -155488841 + (TTG)n Simple_repeat Simple_repeat 2 51 0 3 670 1290 271 186 13 chrX 11161519 11161708 -155488588 + L1MB7 LINE L1 5539 5795 -389 3 670 396 0 0 0 chrX 11161708 11161752 -155488544 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 670 1290 271 186 13 chrX 11161752 11162104 -155488192 + L1MB7 LINE L1 5796 6174 -10 3 670 234 277 15 44 chrX 11162105 11162173 -155488123 + LTR16A LTR ERVL 386 451 0 3 670 432 0 0 0 chrX 11162925 11162973 -155487323 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 670 183 279 0 0 chrX 11163058 11163101 -155487195 - L2c LINE L2 -2 3385 3343 3 670 390 69 0 0 chrX 11163181 11163239 -155487057 + (A)n Simple_repeat Simple_repeat 1 58 0 3 670 557 204 0 34 chrX 11163392 11163509 -155486787 + PB1D10 SINE Alu 2 114 -3 3 670 299 248 28 65 chrX 11163656 11163764 -155486532 + MER3 DNA MER1_type 89 192 -17 3 670 809 243 24 14 chrX 11164142 11164355 -155485941 - ID_B1 SINE B4 -9 215 1 3 670 303 71 0 0 chrX 11164373 11164415 -155485881 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 3 670 882 273 29 5 chrX 11164415 11164625 -155485671 - ID_B1 SINE B4 -9 215 1 3 670 273 256 110 11 chrX 11164683 11164774 -155485522 - RSINE1 SINE B4 -1 164 65 3 670 465 133 0 0 chrX 11167166 11167241 -155483055 + (TCCC)n Simple_repeat Simple_repeat 3 77 0 3 670 270 162 13 26 chrX 11167722 11167798 -155482498 + C-rich Low_complexity Low_complexity 4 78 0 3 670 884 307 35 16 chrX 11168236 11168494 -155481802 + B4 SINE B4 3 265 -27 3 670 369 0 0 0 chrX 11168498 11168539 -155481757 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 670 424 300 27 0 chrX 11170153 11170263 -155480033 + B1F2 SINE Alu 1 113 -36 3 670 361 351 42 9 chrX 11170282 11170495 -155479801 + LTR33 LTR ERVL 1 220 -295 3 670 1094 218 154 68 chrX 11170552 11170936 -155479360 - MTD LTR MaLR -2 417 1 3 670 261 0 0 0 chrX 11171091 11171120 -155479176 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 670 330 121 0 0 chrX 11171120 11171186 -155479110 + (GA)n Simple_repeat Simple_repeat 2 67 0 3 670 387 259 24 0 chrX 11171210 11171295 -155479001 - RSINE1 SINE B4 -68 97 11 3 670 357 24 0 0 chrX 11171641 11171683 -155478613 + (CCA)n Simple_repeat Simple_repeat 1 42 0 3 670 443 279 148 70 chrX 11172160 11172403 -155477893 + B4 SINE B4 8 269 -23 3 670 324 0 0 0 chrX 11172403 11172439 -155477857 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 670 213 169 0 0 chrX 11172454 11172513 -155477783 + CT-rich Low_complexity Low_complexity 1 59 0 3 670 363 96 0 0 chrX 11172531 11172583 -155477713 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 670 295 238 0 24 chrX 11172660 11172742 -155477554 + L1MB8 LINE L1 6069 6148 -30 3 670 1550 231 42 13 chrX 11173046 11173427 -155476869 - MTD LTR MaLR -14 405 14 3 670 913 269 9 4 chrX 11173658 11173923 -155476373 + L1MB3 LINE L1 5787 6045 -134 3 670 241 261 0 17 chrX 11173928 11173997 -155476299 + ID4 SINE ID 13 80 -72 3 670 233 288 25 12 chrX 11174176 11174257 -155476039 - LTR16A1 LTR ERVL 0 456 375 3 670 293 361 78 78 chrX 11174805 11175192 -155475104 + MLT1K LTR MaLR 194 580 -15 3 670 191 275 8 0 chrX 11175210 11175265 -155475031 + MIRb SINE MIR 158 220 -48 3 670 290 294 203 32 chrX 11175511 11175634 -155474662 - B4 SINE B4 -3 289 146 3 670 1107 72 0 0 chrX 11175636 11175774 -155474522 + B1_Mus1 SINE Alu 2 139 -9 3 670 543 31 0 0 chrX 11175774 11175839 -155474457 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 670 518 307 56 22 chrX 11176119 11176439 -155473857 - L3 LINE CR1 -2215 2274 1944 3 670 398 299 119 26 chrX 11176651 11176878 -155473418 - LTR16C LTR ERVL -4 485 238 3 670 1642 266 78 32 chrX 11177009 11177573 -155472723 - Lx8 LINE L1 -9 7464 6875 3 670 254 376 25 25 chrX 11177624 11177744 -155472552 - LTR16C LTR ERVL -358 131 12 3 670 541 269 0 37 chrX 11177741 11177876 -155472420 + B4 SINE B4 163 292 0 3 670 245 301 0 0 chrX 11177955 11178028 -155472268 - MTEa-int LTR MaLR -105 1475 1403 3 670 625 203 106 58 chrX 11178173 11178361 -155471935 - B3A SINE B2 -1 197 1 3 670 306 150 16 16 chrX 11178382 11178443 -155471853 - MLT2C2 LTR ERVL 0 559 499 4 670 970 335 36 49 chrX 11178791 11179259 -155471037 - MT2A LTR ERVL -71 462 1 4 670 406 351 94 15 chrX 11179291 11179557 -155470739 - MTEa-int LTR MaLR -948 632 346 3 670 381 109 0 0 chrX 11179560 11179624 -155470672 + (TGAG)n Simple_repeat Simple_repeat 1 64 0 4 670 722 223 0 0 chrX 11179627 11179757 -155470539 - B1_Mur1 SINE Alu -10 139 10 4 670 306 0 0 0 chrX 11179798 11179832 -155470464 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 670 718 242 0 7 chrX 11179835 11179985 -155470311 - B3A SINE B2 -48 150 2 4 670 917 324 29 3 chrX 11179988 11180332 -155469964 - MTEa-int LTR MaLR -1227 353 1 3 670 302 278 59 25 chrX 11180348 11180466 -155469830 - MTEa LTR MaLR -20 359 238 3 670 383 328 8 0 chrX 11180518 11180545 -155469751 - MLT2B3 LTR ERVL -425 129 1 4 670 423 196 0 89 chrX 11180545 11180646 -155469650 - MTEa LTR MaLR -287 92 1 3 670 437 252 18 9 chrX 11180724 11180836 -155469460 - MLT1A1 LTR MaLR -48 360 248 4 670 707 296 59 56 chrX 11180902 11181188 -155469108 - B4A SINE B4 0 292 6 4 670 248 254 0 15 chrX 11181242 11181310 -155468986 - MLT1A1 LTR MaLR -311 97 31 4 670 561 171 72 0 chrX 11182616 11182727 -155467569 + ORR1D1 LTR MaLR 1 119 -255 4 670 24 53 0 0 chrX 11182763 11182801 -155467495 + AT_rich Low_complexity Low_complexity 1 38 0 4 670 474 186 12 0 chrX 11182815 11182901 -155467395 + B3 SINE B2 56 142 -74 4 670 730 229 0 66 chrX 11182976 11183125 -155467171 + ORR1C2 LTR MaLR 16 161 -217 4 670 180 77 0 0 chrX 11183125 11183151 -155467145 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 670 730 229 0 66 chrX 11183151 11183183 -155467113 + ORR1C2 LTR MaLR 162 185 -193 4 670 204 134 59 15 chrX 11183193 11183261 -155467035 + (TCTCTG)n Simple_repeat Simple_repeat 4 74 0 4 670 897 138 56 0 chrX 11183300 11183460 -155466836 + ORR1C2 LTR MaLR 214 382 -2 4 670 541 228 17 34 chrX 11183465 11183583 -155466713 - B3A SINE B2 -82 116 1 4 670 181 366 175 8 chrX 11184232 11184717 -155465579 + L3 LINE CR1 3373 3938 -551 4 670 698 256 106 132 chrX 11184778 11185165 -155465131 - MTE2a LTR MaLR 0 379 3 4 670 317 270 10 10 chrX 11185734 11185835 -155464461 + MTEb LTR MaLR 279 379 0 4 670 2988 57 59 0 chrX 11185887 11186275 -155464021 - RLTR10A LTR ERVK 0 411 1 4 670 4790 106 39 10 chrX 11186275 11187003 -155463293 - RLTR10-int LTR ERVK -1 1986 1288 4 670 3708 60 82 12 chrX 11187008 11187495 -155462801 - RLTR10-int LTR ERVK -1015 5527 5007 4 670 1407 142 163 32 chrX 11187495 11187901 -155462395 - RLTR10-int LTR ERVK -1385 602 295 4 670 2863 48 87 5 chrX 11187903 11188283 -155462013 - RLTR10A LTR ERVK 0 411 1 4 670 232 329 0 0 chrX 11188791 11188867 -155461429 - ID4_ SINE ID -5 78 3 4 670 243 273 0 18 chrX 11188946 11189002 -155461294 - B1F1 SINE Alu -89 60 6 4 670 336 48 0 0 chrX 11189133 11189175 -155461121 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 670 534 218 86 20 chrX 11189177 11189317 -155460979 - RSINE1 SINE B4 -14 151 2 4 670 538 299 14 0 chrX 11189484 11189631 -155460665 + MLT1A1 LTR MaLR 260 408 0 4 670 427 166 3 3 chrX 11190123 11190198 -155460098 + RSINE1 SINE B4 2 77 -88 4 670 243 88 0 0 chrX 11191858 11191892 -155458404 + (GGGGA)n Simple_repeat Simple_repeat 5 38 0 4 670 565 119 20 0 chrX 11192102 11192203 -155458093 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 4 670 1349 93 22 0 chrX 11192245 11192427 -155457869 - B2_Mm2 SINE B2 -8 187 2 4 670 360 0 0 0 chrX 11192436 11192476 -155457820 + (TTG)n Simple_repeat Simple_repeat 2 41 0 4 670 257 316 77 72 chrX 11192542 11192819 -155457477 + MLT1A1 LTR MaLR 72 365 0 4 670 319 228 266 57 chrX 11193050 11193208 -155457088 + MER20 DNA MER1_type 1 191 -28 4 670 180 182 0 0 chrX 11193276 11193320 -155456976 + T-rich Low_complexity Low_complexity 1 44 0 4 670 207 0 0 0 chrX 11193323 11193346 -155456950 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 670 2068 136 11 35 chrX 11193361 11193728 -155456568 - ORR1B2 LTR MaLR -8 359 2 4 670 734 169 65 0 chrX 11193728 11193852 -155456444 - B1_Mus2 SINE Alu -15 132 1 4 670 541 220 9 0 chrX 11193890 11193999 -155456297 - ID_B1 SINE B4 0 224 115 4 670 192 77 0 0 chrX 11194040 11194066 -155456230 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 4 670 796 260 13 34 chrX 11194080 11194315 -155455981 - Lx6 LINE L1 -177 7283 7054 4 670 395 309 80 6 chrX 11194363 11194539 -155455757 - MER3 DNA MER1_type 0 209 21 4 670 290 317 0 38 chrX 11194738 11194843 -155455453 - MLT1A1 LTR MaLR -1 407 307 4 670 253 293 33 41 chrX 11194940 11195061 -155455235 - MLT1A1 LTR MaLR -288 120 1 4 670 1245 239 25 0 chrX 11195074 11195434 -155454862 - Charlie4a DNA MER1_type -66 442 74 4 670 451 192 224 0 chrX 11195515 11195640 -155454656 + URR1B DNA MER1_type 1 153 -72 4 670 2390 252 42 22 chrX 11195641 11196195 -155454101 - RMER1C Other Other -6 1336 770 4 670 3499 33 0 0 chrX 11196195 11196591 -155453705 + MTA_Mm LTR MaLR 1 396 0 4 670 2390 252 42 22 chrX 11196591 11196636 -155453660 - RMER1C Other Other -573 769 725 4 670 242 307 43 43 chrX 11196699 11196791 -155453505 - RMER1C Other Other -1223 119 28 4 670 229 244 0 0 chrX 11196865 11196906 -155453390 + (CGG)n Simple_repeat Simple_repeat 3 43 0 4 670 509 108 12 0 chrX 11197191 11197274 -155453022 + URR1B DNA MER1_type 138 221 -4 4 670 974 271 20 40 chrX 11197515 11197787 -155452509 + B4A SINE B4 2 267 -25 4 670 1089 101 0 0 chrX 11197787 11197966 -155452330 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 670 974 271 20 40 chrX 11197966 11197989 -155452307 + B4A SINE B4 268 290 -2 4 670 564 235 22 74 chrX 11199535 11199736 -155450560 + MLT1A0 LTR MaLR 3 195 -213 4 670 395 117 125 38 chrX 11199732 11199812 -155450484 + B1_Mus2 SINE Alu 60 146 -1 4 670 315 287 43 17 chrX 11199978 11200095 -155450201 + MLT1A0 LTR MaLR 204 323 -42 4 670 270 0 0 0 chrX 11200267 11200297 -155449999 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 670 305 311 95 25 chrX 11200554 11200745 -155449551 - MER2B DNA MER2_type -54 282 72 4 670 832 238 86 34 chrX 11200745 11200954 -155449342 - ID_B1 SINE B4 0 224 5 4 670 305 311 95 25 chrX 11200954 11201003 -155449293 - MER2B DNA MER2_type -265 71 25 4 670 378 0 0 0 chrX 11201024 11201066 -155449230 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 670 436 218 129 0 chrX 11201146 11201247 -155449049 + B1F1 SINE Alu 28 141 -8 4 670 22 35 0 0 chrX 11201557 11201586 -155448710 + AT_rich Low_complexity Low_complexity 1 29 0 4 670 1172 188 14 18 chrX 11201590 11201807 -155448489 + B3 SINE B2 1 216 0 4 670 378 0 0 0 chrX 11202108 11202150 -155448146 + (TTG)n Simple_repeat Simple_repeat 2 43 0 4 670 192 77 0 0 chrX 11202150 11202175 -155448121 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 4 670 494 252 29 22 chrX 11202175 11202313 -155447983 - B1F SINE Alu -10 139 1 4 670 436 259 6 0 chrX 11202313 11202483 -155447813 + MER3 DNA MER1_type 2 133 -191 4 670 259 225 34 101 chrX 11202511 11202600 -155447696 + MER33 DNA MER1_type 233 315 -9 4 670 383 231 22 0 chrX 11203257 11203348 -155446948 + PB1D10 SINE Alu 25 117 0 4 670 576 333 184 13 chrX 11203422 11203726 -155446570 + MLT1G3 LTR MaLR 240 595 0 4 670 1069 261 36 36 chrX 11203812 11204174 -155446122 + MTEb LTR MaLR 6 367 -12 4 670 204 122 0 0 chrX 11204174 11204215 -155446081 + (A)n Simple_repeat Simple_repeat 1 41 0 4 670 509 285 40 64 chrX 11206091 11206387 -155443909 - MER5C DNA MER1_type -1 312 24 4 670 324 0 0 0 chrX 11208177 11208213 -155442083 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 670 301 281 76 32 chrX 11209569 11209727 -155440569 - MIRb SINE MIR -40 222 58 4 670 418 286 0 9 chrX 11209822 11209935 -155440361 + PB1D10 SINE Alu 1 112 -5 4 670 232 180 361 0 chrX 11210050 11210111 -155440185 - ID4_ SINE ID 0 83 1 4 670 248 0 0 30 chrX 11210213 11210246 -155440050 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 4 670 841 131 14 28 chrX 11210903 11211044 -155439252 - B1_Mur3 SINE Alu -8 141 3 4 670 784 195 30 66 chrX 11211069 11211267 -155439029 - B3 SINE B2 -11 205 15 4 670 323 250 14 0 chrX 11211705 11211788 -155438508 + L1MC4 LINE L1 7607 7677 -365 4 670 351 0 0 0 chrX 11211948 11211987 -155438309 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 670 272 221 29 29 chrX 11211991 11212061 -155438235 + CT-rich Low_complexity Low_complexity 4 73 0 4 670 207 69 0 0 chrX 11212105 11212134 -155438162 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 4 670 228 86 0 0 chrX 11213270 11213305 -155436991 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 4 670 687 259 72 39 chrX 11213473 11213654 -155436642 + B3 SINE B2 1 187 -29 4 670 552 89 0 0 chrX 11213654 11213733 -155436563 + (TAGA)n Simple_repeat Simple_repeat 2 80 0 4 670 1422 229 193 44 chrX 11215482 11216072 -155434224 - MER44D DNA MER2_type -5 700 23 4 670 299 280 8 76 chrX 11216504 11216629 -155433667 - PB1 SINE Alu 0 127 11 4 670 252 143 0 0 chrX 11216645 11216687 -155433609 + (TTG)n Simple_repeat Simple_repeat 3 44 0 4 670 1353 251 85 13 chrX 11216872 11216910 -155433386 - MTD LTR MaLR 0 419 378 4 670 246 32 0 0 chrX 11216910 11216941 -155433355 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 670 1353 251 85 13 chrX 11216941 11217277 -155433019 - MTD LTR MaLR -42 377 18 4 670 523 338 32 28 chrX 11217612 11217895 -155432401 - L1MEd LINE L1 -4461 1688 1405 4 670 198 0 0 0 chrX 11217902 11217924 -155432372 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 4 670 397 209 30 52 chrX 11218091 11218205 -155432091 - B3A SINE B2 -102 114 6 4 670 236 206 151 0 chrX 11218212 11218285 -155432011 - L1MEd LINE L1 -4832 1393 1310 4 670 275 269 139 0 chrX 11218290 11218398 -155431898 - B1_Mur1 SINE Alu -3 146 24 4 670 736 314 162 38 chrX 11218605 11219405 -155430891 - L1MEd LINE L1 -5140 979 80 4 670 22 0 0 0 chrX 11219454 11219476 -155430820 + AT_rich Low_complexity Low_complexity 1 22 0 4 670 514 313 76 33 chrX 11219753 11220057 -155430239 - ORR1E LTR MaLR 0 359 43 4 670 271 335 119 12 chrX 11220104 11220264 -155430032 + MIRb SINE MIR 4 180 -88 4 670 396 117 0 0 chrX 11220311 11220388 -155429908 + (TAGA)n Simple_repeat Simple_repeat 2 78 0 4 670 1245 247 117 15 chrX 11220398 11220858 -155429438 - MLT2B5 LTR ERVL -19 582 76 4 670 656 198 24 0 chrX 11221266 11221392 -155428904 + RSINE1 SINE B4 2 130 -35 4 670 288 0 0 0 chrX 11221393 11221425 -155428871 + (CCA)n Simple_repeat Simple_repeat 1 32 0 4 670 183 80 0 0 chrX 11221425 11221450 -155428846 + (CAA)n Simple_repeat Simple_repeat 3 27 0 4 670 406 261 28 0 chrX 11223147 11223252 -155427044 + PB1D10 SINE Alu 7 124 -3 4 670 229 274 156 10 chrX 11223273 11223369 -155426927 + MER5A DNA MER1_type 80 189 0 4 670 302 339 64 0 chrX 11223372 11223481 -155426815 + MLT1J2 LTR MaLR 259 374 -74 4 670 657 332 99 92 chrX 11224005 11224142 -155426154 + MLT1E1A LTR MaLR 3 153 -527 5 670 1653 195 44 28 chrX 11224142 11224506 -155425790 - ORR1D2 LTR MaLR 0 370 1 5 670 6815 180 40 25 chrX 11224506 11225853 -155424443 - ORR1D2-int LTR MaLR 0 1370 3 5 670 657 332 99 92 chrX 11225853 11226331 -155423965 + MLT1E1A LTR MaLR 154 622 -58 5 670 436 298 0 50 chrX 11226459 11226530 -155423766 - PB1D10 SINE Alu -1 116 46 5 670 1461 175 83 83 chrX 11226530 11226904 -155423392 - ORR1D1 LTR MaLR 0 374 1 5 670 436 298 0 50 chrX 11226904 11226952 -155423344 - PB1D10 SINE Alu -72 45 3 5 670 428 359 107 74 chrX 11227155 11227558 -155422738 + LTR16A1 LTR ERVL 21 436 -20 5 670 304 306 47 40 chrX 11227572 11227722 -155422574 - MLT1A0 LTR MaLR -4 404 254 5 670 394 239 11 0 chrX 11227996 11228084 -155422212 - MLT1A0 LTR MaLR -276 89 1 5 670 261 0 0 0 chrX 11228474 11228503 -155421793 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 670 378 0 0 0 chrX 11228849 11228891 -155421405 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 670 618 174 102 36 chrX 11229236 11229373 -155420923 + B1_Mus2 SINE Alu 1 146 -1 5 670 216 0 0 0 chrX 11229752 11229776 -155420520 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 670 379 353 50 34 chrX 11229956 11230204 -155420092 - MLT1H LTR MaLR -226 323 40 5 670 339 285 119 40 chrX 11230278 11230479 -155419817 - MamRep1161 DNA TcMar -503 454 238 5 670 860 327 103 21 chrX 11230970 11231430 -155418866 - MLT1G LTR MaLR -14 581 2 5 670 504 288 28 11 chrX 11231430 11231582 -155418714 - MamRep1161 DNA TcMar -788 169 15 5 670 230 317 176 32 chrX 11231650 11231868 -155418428 - MIRb SINE MIR -2 260 15 5 670 234 328 102 17 chrX 11233422 11233540 -155416756 + MLT1K LTR MaLR 458 585 -10 5 670 238 307 93 0 chrX 11234205 11234280 -155416016 - MIRb SINE MIR -100 168 87 5 670 284 245 285 34 chrX 11234386 11234591 -155415705 + MIR SINE MIR 23 252 -10 5 670 470 243 87 14 chrX 11235613 11235751 -155414545 + B1F SINE Alu 1 148 -1 5 670 376 281 124 116 chrX 11235840 11236202 -155414094 + MLT1H2 LTR MaLR 87 451 -38 5 670 351 0 0 0 chrX 11236510 11236549 -155413747 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 670 525 275 82 0 chrX 11236615 11236786 -155413510 - MamRep434 DNA TcMar -140 286 102 5 670 810 279 100 69 chrX 11237286 11237675 -155412621 + MTD LTR MaLR 1 401 -18 5 670 434 197 49 34 chrX 11237763 11237885 -155412411 + B1F1 SINE Alu 1 127 0 5 670 605 283 0 7 chrX 11238100 11238239 -155412057 - RSINE1 SINE B4 -25 140 3 5 670 662 340 62 42 chrX 11238610 11239004 -155411292 + LTR33A_ LTR ERVL 118 514 -6 5 670 251 318 77 98 chrX 11239074 11239093 -155411203 + B4 SINE B4 77 216 -76 5 670 555 252 0 8 chrX 11239093 11239217 -155411079 + B1_Mur4 SINE Alu 18 140 -10 5 670 298 317 41 8 chrX 11239256 11239377 -155410919 - MIRb SINE MIR -64 204 80 5 670 197 33 33 0 chrX 11239968 11239998 -155410298 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 670 195 324 46 28 chrX 11241261 11241369 -155408927 + MIR SINE MIR 39 148 -60 5 670 21 0 0 0 chrX 11241371 11241392 -155408904 + GC_rich Low_complexity Low_complexity 1 21 0 5 670 21 0 0 0 chrX 11241808 11241829 -155408467 + GC_rich Low_complexity Low_complexity 1 21 0 5 670 210 233 0 0 chrX 11241852 11241895 -155408401 + C-rich Low_complexity Low_complexity 4 46 0 5 670 306 280 74 111 chrX 11243231 11243420 -155406876 - MER34 LTR ERV1 -51 491 310 5 670 192 111 0 0 chrX 11243687 11243723 -155406573 + (C)n Simple_repeat Simple_repeat 1 36 0 5 670 1322 290 109 9 chrX 11244376 11244915 -155405381 - L1ME3 LINE L1 -20 6142 5550 5 670 182 369 38 15 chrX 11244982 11245114 -155405182 - MIR SINE MIR 0 262 128 5 670 483 87 0 0 chrX 11245357 11245426 -155404870 + (TG)n Simple_repeat Simple_repeat 1 69 0 5 670 570 198 111 8 chrX 11245428 11245545 -155404751 - RSINE1 SINE B4 -34 131 3 5 670 305 274 181 28 chrX 11245725 11245957 -155404339 - MLT1F LTR MaLR -95 453 236 5 670 412 194 30 30 chrX 11246095 11246196 -155404100 + PB1D9 SINE Alu 1 101 -19 5 670 268 239 28 0 chrX 11246196 11246267 -155404029 + GA-rich Low_complexity Low_complexity 1 73 0 5 670 324 48 0 0 chrX 11247144 11247186 -155403110 + (CAAT)n Simple_repeat Simple_repeat 4 45 0 5 670 680 215 59 0 chrX 11247227 11247362 -155402934 - B1_Mur3 SINE Alu -6 143 1 5 670 1149 96 70 43 chrX 11247697 11247883 -155402413 - B2_Mm2 SINE B2 -3 192 2 5 670 231 336 24 63 chrX 11247954 11248081 -155402215 + MIR SINE MIR 48 169 -93 5 670 926 228 19 10 chrX 11248187 11248395 -155401901 - B3 SINE B2 -6 210 1 5 670 301 296 140 7 chrX 11248442 11248585 -155401711 - L1ME3A LINE L1 -67 6106 5945 5 670 183 42 0 0 chrX 11249701 11249725 -155400571 + (CTCTG)n Simple_repeat Simple_repeat 2 25 0 5 670 284 0 28 0 chrX 11250811 11250847 -155399449 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 670 396 0 0 0 chrX 11251069 11251113 -155399183 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 670 219 341 103 29 chrX 11251116 11251252 -155399044 - MIRb SINE MIR -76 192 47 5 670 651 331 39 22 chrX 11251378 11251671 -155398625 - LTR16C LTR ERVL 0 538 236 5 670 657 146 195 0 chrX 11251945 11252068 -155398228 + B1_Mur1 SINE Alu 2 148 -1 5 670 985 281 136 33 chrX 11252631 11253146 -155397150 + MLT1D LTR MaLR 21 612 -15 5 670 1428 6 0 0 chrX 11253230 11253391 -155396905 + (TCTCCC)n Simple_repeat Simple_repeat 4 164 0 5 670 557 207 126 0 chrX 11253404 11253515 -155396781 - B1_Mur1 SINE Alu -21 128 4 5 670 191 271 31 169 chrX 11253804 11253964 -155396332 - MER5A DNA MER1_type 0 189 52 5 670 543 290 121 30 chrX 11254117 11254316 -155395980 - B4 SINE B4 -75 217 1 5 670 659 315 87 100 chrX 11254518 11255079 -155395217 + MLT1L LTR MaLR 3 556 -54 5 670 3447 132 30 14 chrX 11255125 11255684 -155394612 + RMER15 LTR ERVL 3 570 -5 5 670 1319 216 21 31 chrX 11255690 11255977 -155394319 + RMER15-int LTR ERVL 4 287 -4712 5 670 1264 221 23 75 chrX 11256053 11256509 -155393787 + L1MA6 LINE L1 5786 6207 -84 5 670 362 21 0 21 chrX 11256510 11256558 -155393738 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 670 1130 254 9 0 chrX 11256594 11256814 -155393482 + ID_B1 SINE B4 2 223 -1 5 670 955 329 99 30 chrX 11256830 11257266 -155393030 + MLT1G1 LTR MaLR 92 557 -22 5 670 405 0 0 0 chrX 11257370 11257415 -155392881 + (GA)n Simple_repeat Simple_repeat 1 45 0 5 670 321 302 9 36 chrX 11257441 11257551 -155392745 - MER58A DNA MER1_type -69 155 49 5 670 244 295 12 25 chrX 11257665 11257745 -155392551 + Lx8 LINE L1 7197 7275 -198 5 670 313 158 13 26 chrX 11258579 11258599 -155391697 + polypyrimidine Low_complexity Low_complexity 59 77 0 5 670 579 40 0 0 chrX 11258599 11258673 -155391623 + (TCTA)n Simple_repeat Simple_repeat 2 75 0 5 670 313 158 13 26 chrX 11258673 11258730 -155391566 + CT-rich Low_complexity Low_complexity 1 58 0 5 670 439 344 63 55 chrX 11258982 11259284 -155391012 + HAL1 LINE L1 2 317 -2190 5 670 756 206 15 0 chrX 11259284 11259420 -155390876 + B1_Mur2 SINE Alu 1 138 -11 5 670 201 39 0 0 chrX 11259420 11259446 -155390850 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 670 439 344 63 55 chrX 11259446 11259501 -155390795 + HAL1 LINE L1 318 363 -2144 5 670 2153 173 16 47 chrX 11259501 11259931 -155390365 + MTD LTR MaLR 1 417 -2 5 670 248 301 11 57 chrX 11260183 11260271 -155390025 + HAL1 LINE L1 624 707 -1800 5 670 281 229 0 0 chrX 11260352 11260422 -155389874 + ID4 SINE ID 3 72 -11 5 670 369 182 0 0 chrX 11260422 11260521 -155389775 + GA-rich Low_complexity Low_complexity 1 99 0 5 670 435 260 68 14 chrX 11260641 11260789 -155389507 - MIR SINE MIR -10 252 97 5 670 328 257 14 0 chrX 11260932 11261006 -155389290 + ID4_ SINE ID 4 78 -5 5 670 28 29 0 0 chrX 11261007 11261042 -155389254 + AT_rich Low_complexity Low_complexity 1 35 0 5 670 207 139 0 0 chrX 11261279 11261315 -155388981 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 670 456 249 43 78 chrX 11261395 11261626 -155388670 + HAL1 LINE L1 1136 1358 -1149 5 670 478 242 104 8 chrX 11261746 11261871 -155388425 + B1F2 SINE Alu 2 138 -11 5 670 768 255 94 146 chrX 11262026 11262234 -155388062 + MER2 DNA MER2_type 2 173 -172 5 670 1678 202 100 8 chrX 11262234 11262614 -155387682 + MTD LTR MaLR 3 417 -2 5 670 768 255 94 146 chrX 11262614 11262768 -155387528 + MER2 DNA MER2_type 174 345 0 5 670 246 339 8 0 chrX 11262884 11263002 -155387294 + HAL1 LINE L1 2266 2384 -123 5 670 382 281 70 0 chrX 11263891 11264005 -155386291 - Tigger5 DNA MER2_type 0 2406 2285 5 670 3548 211 81 52 chrX 11264038 11264512 -155385784 - RCHARR1 DNA MER1_type -29 945 478 5 670 927 155 0 26 chrX 11264512 11264664 -155385632 - B1_Mur2 SINE Alu -1 148 1 5 670 3548 211 81 52 chrX 11264664 11265102 -155385194 - RCHARR1 DNA MER1_type -497 477 6 5 670 446 281 24 78 chrX 11265105 11265271 -155385025 - Tigger5 DNA MER2_type -2179 227 71 5 670 262 326 65 7 chrX 11267667 11267806 -155382490 + L3b LINE CR1 8 154 -328 5 670 244 309 0 49 chrX 11267869 11267971 -155382325 - B4 SINE B4 -172 120 24 5 670 617 284 63 5 chrX 11268208 11268413 -155381883 + B4A SINE B4 5 221 -71 5 670 420 20 0 0 chrX 11268615 11268664 -155381632 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 670 231 36 0 0 chrX 11269047 11269075 -155381221 + (CAAG)n Simple_repeat Simple_repeat 1 28 0 5 670 870 209 32 0 chrX 11270607 11270794 -155379502 + B3A SINE B2 5 197 -1 5 670 222 338 0 24 chrX 11270813 11270895 -155379401 + MIR SINE MIR 156 235 -27 5 670 199 245 20 20 chrX 11270990 11271040 -155379256 - MIR SINE MIR -123 139 90 5 670 1108 192 56 0 chrX 11271471 11271669 -155378627 - B3 SINE B2 -7 209 1 5 670 252 255 0 18 chrX 11271682 11271738 -155378558 - MLT1H2 LTR MaLR -356 133 79 5 670 264 276 0 62 chrX 11271874 11271955 -155378341 + polypurine Low_complexity Low_complexity 3 78 0 5 671 543 194 35 61 chrX 11272559 11272674 -155377622 + RSINE1 SINE B4 12 123 -42 5 671 477 76 0 0 chrX 11272699 11272765 -155377531 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 671 585 178 212 0 chrX 11272792 11272910 -155377386 - B1_Mur2 SINE Alu -5 144 2 6 671 378 310 135 40 chrX 11273127 11273379 -155376917 - MLT1G3 LTR MaLR -216 379 104 6 671 396 0 0 0 chrX 11273433 11273477 -155376819 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 671 504 0 0 0 chrX 11273512 11273568 -155376728 + (TC)n Simple_repeat Simple_repeat 2 57 0 6 671 351 289 45 102 chrX 11274296 11274473 -155375823 + ORR1E LTR MaLR 4 170 -189 6 671 600 232 67 72 chrX 11274533 11274575 -155375721 + B3 SINE B2 4 47 -169 6 671 818 148 74 0 chrX 11274575 11274710 -155375586 + B1_Mur4 SINE Alu 1 145 -5 6 671 648 38 0 0 chrX 11274712 11274791 -155375505 + (GA)n Simple_repeat Simple_repeat 1 79 0 6 671 600 232 67 72 chrX 11274791 11274954 -155375342 + B3 SINE B2 48 211 -5 6 671 280 331 76 30 chrX 11275112 11275243 -155375053 + MLT1A1 LTR MaLR 268 404 -4 6 671 440 330 27 54 chrX 11276277 11276463 -155373833 - Tigger5 DNA MER2_type -2201 205 25 6 671 263 250 0 0 chrX 11276491 11276555 -155373741 + CT-rich Low_complexity Low_complexity 3 66 0 6 671 712 266 19 160 chrX 11276600 11276806 -155373490 - B3A SINE B2 -11 184 8 6 671 23 33 0 0 chrX 11276839 11276869 -155373427 + AT_rich Low_complexity Low_complexity 1 30 0 6 671 670 297 0 0 chrX 11276882 11277020 -155373276 - RSINE1 SINE B4 -26 139 2 6 671 180 0 0 0 chrX 11277113 11277133 -155373163 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 6 671 220 276 0 33 chrX 11277562 11277622 -155372674 + L2 LINE L2 99 156 -3263 6 671 460 271 41 31 chrX 11277704 11277898 -155372398 + L1ME5 LINE L1 5785 5980 -214 6 671 285 310 52 119 chrX 11278102 11278296 -155372000 - MIRc SINE MIR -61 215 33 6 671 251 314 62 76 chrX 11278624 11278834 -155371462 - MLT1K LTR MaLR -6 589 383 6 671 258 136 0 0 chrX 11278834 11278878 -155371418 + (TCC)n Simple_repeat Simple_repeat 3 46 0 6 671 984 236 26 0 chrX 11279203 11279394 -155370902 + B3 SINE B2 18 213 -3 6 671 2138 179 35 10 chrX 11279695 11280090 -155370206 + MTD LTR MaLR 1 405 -14 6 671 437 274 29 36 chrX 11280095 11280235 -155370061 - B1F1 SINE Alu -10 139 1 6 671 354 80 0 0 chrX 11281190 11281240 -155369056 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 671 825 65 0 0 chrX 11281950 11282058 -155368238 + (TTTCC)n Simple_repeat Simple_repeat 3 110 0 6 671 372 94 0 0 chrX 11282060 11282113 -155368183 + (TCC)n Simple_repeat Simple_repeat 3 55 0 6 671 1036 281 18 39 chrX 11282311 11282592 -155367704 + B4 SINE B4 1 275 -17 6 671 1054 306 108 19 chrX 11283288 11283827 -155366469 - MLT1G LTR MaLR -3 588 2 6 671 261 333 82 16 chrX 11284405 11284527 -155365769 - MIRc SINE MIR -124 144 15 6 671 235 192 0 55 chrX 11285493 11285548 -155364748 + GA-rich Low_complexity Low_complexity 4 55 0 6 671 200 343 9 54 chrX 11286350 11286461 -155363835 + MIR3 SINE MIR 81 186 -22 6 671 332 289 13 0 chrX 11287138 11287214 -155363082 + ID4_ SINE ID 4 80 -3 6 671 249 342 44 0 chrX 11287254 11287368 -155362928 + MIRb SINE MIR 78 196 -72 6 671 764 196 12 16 chrX 11288142 11288394 -155361902 + (TGGA)n Simple_repeat Simple_repeat 1 250 0 6 671 527 312 26 11 chrX 11288824 11289015 -155361281 - B3A SINE B2 -4 194 1 6 671 219 200 321 57 chrX 11289592 11289698 -155360598 + MIR SINE MIR 129 262 0 6 671 297 303 80 27 chrX 11291296 11291408 -155358888 + MLT1A0 LTR MaLR 23 140 -225 6 671 4785 168 35 73 chrX 11291559 11292496 -155357800 + RMER19B LTR ERVK 1 902 0 6 671 351 223 131 37 chrX 11292684 11292791 -155357505 + PB1D10 SINE Alu 1 117 0 6 671 838 236 35 35 chrX 11293228 11293426 -155356870 + ID_B1 SINE B4 3 200 -24 6 671 379 307 94 24 chrX 11293553 11293723 -155356573 + L1ME3A LINE L1 5992 6173 0 6 671 2417 64 22 0 chrX 11294399 11294711 -155355585 - ORR1A2 LTR MaLR -8 319 1 6 671 710 305 92 4 chrX 11295027 11295277 -155355019 + MER2 DNA MER2_type 74 345 0 6 671 1527 159 30 188 chrX 11295485 11295958 -155354338 - RMER10B LTR ERVL 0 398 1 6 671 234 0 0 0 chrX 11296324 11296350 -155353946 + (T)n Simple_repeat Simple_repeat 1 26 0 6 671 463 282 42 55 chrX 11296864 11297029 -155353267 + RSINE1 SINE B4 3 165 0 6 671 564 248 36 0 chrX 11297096 11297233 -155353063 + B1F SINE Alu 2 143 -6 6 671 565 226 0 34 chrX 11297965 11298084 -155352212 + B1_Mur3 SINE Alu 33 147 -2 6 671 1206 208 242 9 chrX 11298441 11298780 -155351516 - MTD LTR MaLR 0 419 2 6 671 671 275 119 5 chrX 11298853 11299072 -155351224 + MER47B DNA MER2_type 7 250 -168 6 671 654 256 18 18 chrX 11299042 11299213 -155351083 + Tigger5 DNA MER2_type 2160 2330 -76 6 671 725 261 37 43 chrX 11299212 11299400 -155350896 - ID_B1 SINE B4 -37 187 1 6 671 226 303 0 57 chrX 11299405 11299475 -155350821 + MER47B DNA MER2_type 344 409 -9 6 671 295 262 69 35 chrX 11299485 11299572 -155350724 + L2b LINE L2 3252 3341 -34 6 671 915 343 35 26 chrX 11300234 11300659 -155349637 - LTR16C LTR ERVL 0 489 61 6 671 351 228 0 12 chrX 11300725 11300805 -155349491 + ID4 SINE ID 3 81 -2 6 671 537 276 0 36 chrX 11300944 11301083 -155349213 + B1_Mur1 SINE Alu 1 134 -15 6 671 1866 142 103 3 chrX 11301083 11301358 -155348938 + ORR1D1 LTR MaLR 2 301 -73 6 671 414 0 0 0 chrX 11301358 11301404 -155348892 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 6 671 1866 142 103 3 chrX 11301404 11301467 -155348829 + ORR1D1 LTR MaLR 302 374 0 6 671 464 286 138 21 chrX 11302248 11302437 -155347859 - ORR1E LTR MaLR -146 213 3 6 671 1420 240 6 37 chrX 11302504 11302828 -155347468 - MTE2a LTR MaLR -18 361 48 6 671 255 216 39 39 chrX 11302852 11302915 -155347381 + B3A SINE B2 115 180 -18 6 671 588 14 0 0 chrX 11302915 11302984 -155347312 + (TC)n Simple_repeat Simple_repeat 1 69 0 6 671 216 0 0 0 chrX 11302984 11303007 -155347289 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 671 255 216 39 39 chrX 11303007 11303019 -155347277 + B3A SINE B2 181 190 -8 6 671 856 194 7 0 chrX 11303145 11303289 -155347007 + ID_B1 SINE B4 80 224 0 6 671 263 308 88 29 chrX 11303169 11303306 -155346990 - YREP_Mm Unknown Unknown -1518 294 150 6 671 210 284 0 29 chrX 11304122 11304191 -155346105 + C-rich Low_complexity Low_complexity 3 69 0 6 671 424 347 68 8 chrX 11304423 11304673 -155345623 + MLT1L LTR MaLR 277 541 -69 6 671 366 147 0 0 chrX 11304888 11304956 -155345340 + (CA)n Simple_repeat Simple_repeat 1 68 0 6 671 395 327 0 0 chrX 11304970 11305120 -155345176 + (CA)n Simple_repeat Simple_repeat 1 150 0 6 671 1084 292 133 47 chrX 11305174 11305601 -155344695 + MLT1C LTR MaLR 1 464 -3 6 671 452 295 88 10 chrX 11306227 11306419 -155343877 + MLT1J LTR MaLR 3 209 -303 6 671 225 308 119 71 chrX 11306492 11306618 -155343678 + MLT1J LTR MaLR 326 457 -55 6 671 412 315 174 31 chrX 11306880 11307161 -155343135 + MLT1H1 LTR MaLR 3 399 -196 6 671 198 0 0 0 chrX 11307161 11307183 -155343113 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 6 671 2883 57 5 3 chrX 11307479 11307851 -155342445 + L1_Mus1 LINE L1 6195 6567 0 6 671 607 285 97 0 chrX 11307882 11308047 -155342249 + B3A SINE B2 1 181 -17 6 671 198 0 0 0 chrX 11308050 11308072 -155342224 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 671 432 159 2 14 chrX 11308402 11308484 -155341812 + B1_Mur4 SINE Alu 2 84 -66 6 671 234 0 0 0 chrX 11308521 11308547 -155341749 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 671 549 305 143 14 chrX 11308548 11308764 -155341532 + B4A SINE B4 13 256 -36 6 671 786 154 16 0 chrX 11309326 11309582 -155340714 + (CA)n Simple_repeat Simple_repeat 1 260 0 6 671 279 305 57 64 chrX 11309917 11310076 -155340220 - L2a LINE L2 -270 3156 2991 6 671 916 289 67 41 chrX 11310153 11310589 -155339707 + L1MC4 LINE L1 7353 7799 -243 6 671 383 216 11 54 chrX 11310902 11310995 -155339301 - RSINE1 SINE B4 -22 143 55 6 671 309 240 0 111 chrX 11311044 11311161 -155339135 + MT2B LTR ERVL 154 257 -344 6 671 873 141 0 15 chrX 11311060 11311197 -155339099 + B1_Mur4 SINE Alu 7 141 -9 6 671 243 0 0 0 chrX 11311197 11311224 -155339072 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 671 486 269 33 88 chrX 11311237 11311477 -155338819 + L1MC4 LINE L1 7816 8042 0 6 671 33 56 0 0 chrX 11311481 11311535 -155338761 + AT_rich Low_complexity Low_complexity 1 54 0 6 671 823 229 44 10 chrX 11311677 11311880 -155338416 + ID_B1 SINE B4 2 211 -13 6 671 548 193 178 0 chrX 11313372 11313507 -155336789 - RSINE1 SINE B4 -4 161 3 6 671 989 261 59 0 chrX 11313569 11313822 -155336474 - MER5C DNA MER1_type -45 268 1 6 671 851 153 153 0 chrX 11313945 11314102 -155336194 - URR1A DNA MER1_type -45 181 1 6 671 251 281 95 95 chrX 11315285 11315411 -155334885 + RSINE1 SINE B4 2 127 -38 6 671 293 0 0 26 chrX 11315422 11315460 -155334836 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 671 26 30 0 0 chrX 11315466 11315499 -155334797 + AT_rich Low_complexity Low_complexity 1 33 0 6 671 1224 102 122 0 chrX 11315558 11315754 -155334542 + URR1A DNA MER1_type 7 226 0 6 671 503 216 48 54 chrX 11315606 11315772 -155334524 - CYRA11_Mm Unknown Y-chromosome -297 320 156 6 671 256 346 135 0 chrX 11317620 11317724 -155332572 - B1F SINE Alu -31 118 1 6 671 315 0 0 0 chrX 11318261 11318296 -155332000 + (TAA)n Simple_repeat Simple_repeat 1 35 0 6 671 1432 245 80 30 chrX 11318310 11318708 -155331588 + MTE2b LTR MaLR 1 419 0 6 671 507 264 9 43 chrX 11318972 11319087 -155331209 + PB1D10 SINE Alu 6 116 -1 6 671 23 0 0 0 chrX 11319087 11319110 -155331186 + AT_rich Low_complexity Low_complexity 1 23 0 7 671 432 246 33 25 chrX 11319165 11319286 -155331010 - L1MB8 LINE L1 -185 5993 5872 7 671 863 279 74 56 chrX 11319295 11319525 -155330771 - B4A SINE B4 -2 290 51 7 671 1746 198 73 179 chrX 11319525 11320208 -155330088 - RMER19C LTR ERVK 0 611 1 7 671 863 279 74 56 chrX 11320208 11320262 -155330034 - B4A SINE B4 -242 50 1 7 671 620 250 30 152 chrX 11320373 11320571 -155329725 - B3A SINE B2 -1 197 13 7 671 296 255 253 7 chrX 11320571 11320641 -155329655 - L1MB8 LINE L1 -494 5690 5589 7 671 207 0 0 0 chrX 11320641 11320664 -155329632 + (CAA)n Simple_repeat Simple_repeat 2 24 0 7 671 296 255 253 7 chrX 11320664 11320743 -155329553 - L1MB8 LINE L1 -596 5588 5504 7 671 195 242 12 44 chrX 11320754 11320914 -155329382 + CT-rich Low_complexity Low_complexity 3 157 0 7 671 596 153 10 20 chrX 11321034 11321127 -155329169 - B1_Mur1 SINE Alu 0 149 57 7 671 405 39 0 0 chrX 11321127 11321178 -155329118 + (TC)n Simple_repeat Simple_repeat 2 52 0 7 671 443 245 60 67 chrX 11321196 11321345 -155328951 - B1F2 SINE Alu -1 148 1 7 671 541 242 10 0 chrX 11321256 11321355 -155328941 - ID_B1 SINE B4 -54 170 71 7 671 242 259 11 76 chrX 11321281 11321373 -155328923 + YREP_Mm Unknown Unknown 253 338 -1474 7 671 23 78 0 0 chrX 11321436 11321487 -155328809 + AT_rich Low_complexity Low_complexity 1 51 0 7 671 816 129 56 28 chrX 11321758 11321902 -155328394 - B1_Mus1 SINE Alu 0 148 1 7 671 272 202 19 6 chrX 11322165 11322228 -155328068 + MIR SINE MIR 92 154 -54 7 671 667 270 0 41 chrX 11322557 11322727 -155327569 - RSINE1 SINE B4 0 165 3 7 671 389 288 90 24 chrX 11322933 11322960 -155327336 - CYRA11_Mm Unknown Y-chromosome -269 348 175 7 671 845 162 0 0 chrX 11322960 11323096 -155327200 + URR1B DNA MER1_type 87 222 -3 7 671 212 302 16 16 chrX 11323721 11323785 -155326511 - MIRc SINE MIR -94 174 111 7 671 248 185 18 36 chrX 11324622 11324678 -155325618 - MIR3 SINE MIR -1 207 153 7 671 432 214 12 0 chrX 11324680 11324764 -155325532 + MER117 DNA MER1_type 3 87 -110 7 671 1388 250 94 35 chrX 11324962 11325418 -155324878 + Charlie4a DNA MER1_type 7 489 -19 7 671 436 316 62 22 chrX 11326626 11326804 -155323492 - MLT1J1 LTR MaLR -237 207 23 7 671 727 182 79 0 chrX 11326869 11326995 -155323301 + B1_Mur1 SINE Alu 1 136 -13 7 671 1124 58 7 0 chrX 11327013 11327150 -155323146 - B1_Mus1 SINE Alu -8 140 3 7 671 201 158 0 0 chrX 11327166 11327204 -155323092 + A-rich Low_complexity Low_complexity 1 38 0 7 671 204 170 75 0 chrX 11327353 11327406 -155322890 - L2a LINE L2 0 3426 3370 7 671 241 331 33 74 chrX 11327414 11327612 -155322684 - MTE2a LTR MaLR -18 361 161 7 671 342 304 32 19 chrX 11327740 11327848 -155322448 + PB1D10 SINE Alu 7 115 -2 7 671 232 317 48 32 chrX 11327751 11327875 -155322421 + ID_B1 SINE B4 98 223 -1 7 671 198 390 63 11 chrX 11327878 11328067 -155322229 + L2a LINE L2 2882 3080 -339 7 671 387 271 104 0 chrX 11328131 11328227 -155322069 + PB1 SINE Alu 19 124 -3 7 671 829 241 60 20 chrX 11328237 11328436 -155321860 + B3 SINE B2 7 213 -3 7 671 231 295 98 0 chrX 11328469 11328530 -155321766 + ID4 SINE ID 5 71 -12 7 671 315 339 71 0 chrX 11328628 11328755 -155321541 + L2a LINE L2 3278 3413 -13 7 671 892 133 0 22 chrX 11328756 11328894 -155321402 + B1_Mur4 SINE Alu 2 136 -14 7 671 1040 136 6 0 chrX 11328894 11329070 -155321226 + (GGAA)n Simple_repeat Simple_repeat 4 180 0 7 671 261 167 0 0 chrX 11329553 11329607 -155320689 + (TTG)n Simple_repeat Simple_repeat 1 54 0 7 671 480 228 0 56 chrX 11329608 11329715 -155320581 - B1_Mur1 SINE Alu -3 146 46 7 671 217 322 11 33 chrX 11330774 11330864 -155319432 + MER5A DNA MER1_type 16 103 -86 7 671 1797 169 252 3 chrX 11332029 11332386 -155317910 - RLTR41 LTR ERV1 0 446 1 7 671 1164 326 24 18 chrX 11332586 11332967 -155317329 + MER45B DNA Tip100 2 384 -656 7 671 580 212 76 8 chrX 11333066 11333185 -155317111 + RSINE1 SINE B4 3 129 -36 7 671 389 81 16 0 chrX 11333300 11333362 -155316934 + (TATG)n Simple_repeat Simple_repeat 2 64 0 7 671 225 230 12 98 chrX 11333375 11333457 -155316839 + RLTR25A LTR ERVK 504 578 -525 7 671 588 186 10 0 chrX 11333396 11333491 -155316805 + B1F2 SINE Alu 46 141 -8 7 671 393 70 0 0 chrX 11333491 11333548 -155316748 + (CATA)n Simple_repeat Simple_repeat 2 58 0 7 671 239 262 180 0 chrX 11333585 11333646 -155316650 - ID4_ SINE ID -11 72 1 7 671 2079 233 32 8 chrX 11333646 11334117 -155316179 + MER45B DNA Tip100 462 943 -97 7 671 1283 279 41 69 chrX 11334131 11334215 -155316081 + MLT1A1 LTR MaLR 2 94 -314 7 671 1651 216 70 11 chrX 11334215 11334571 -155315725 + MTE2b LTR MaLR 1 377 -2 7 671 1283 279 41 69 chrX 11334571 11334905 -155315391 + MLT1A1 LTR MaLR 95 408 0 7 671 1394 219 149 15 chrX 11335158 11335232 -155315064 - ORR1D1 LTR MaLR -1 373 299 7 671 2708 64 0 0 chrX 11335232 11335559 -155314737 - ORR1A2 LTR MaLR 0 327 1 7 671 1394 219 149 15 chrX 11335559 11335813 -155314483 - ORR1D1 LTR MaLR -76 298 1 7 671 201 204 0 22 chrX 11335879 11335924 -155314372 + (TATG)n Simple_repeat Simple_repeat 2 45 0 7 671 376 316 35 9 chrX 11336471 11336586 -155313710 + PB1D7 SINE Alu 1 118 -2 7 671 182 412 69 0 chrX 11337104 11337206 -155313090 + MIRb SINE MIR 132 240 -28 7 671 259 270 112 80 chrX 11337329 11337454 -155312842 - MLT1J LTR MaLR -2 547 419 7 671 290 301 150 29 chrX 11337527 11337667 -155312629 + MLT1A0 LTR MaLR 1 157 -217 7 671 790 229 126 0 chrX 11337687 11337870 -155312426 + B3 SINE B2 11 216 0 7 671 553 325 0 24 chrX 11337893 11338060 -155312236 + RSINE1 SINE B4 1 163 -2 7 671 327 104 0 0 chrX 11338078 11338126 -155312170 + (GA)n Simple_repeat Simple_repeat 2 49 0 7 671 666 0 0 0 chrX 11338126 11338200 -155312096 + (GGAA)n Simple_repeat Simple_repeat 4 77 0 7 671 274 324 0 0 chrX 11338215 11338283 -155312013 + B4A SINE B4 84 151 -141 7 671 308 284 45 0 chrX 11338223 11338290 -155312006 + B1F2 SINE Alu 7 76 -73 7 671 450 0 0 0 chrX 11338290 11338340 -155311956 + (TC)n Simple_repeat Simple_repeat 1 50 0 7 671 351 0 0 0 chrX 11338340 11338378 -155311918 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 671 869 267 14 9 chrX 11338380 11338592 -155311704 + MLT1A0 LTR MaLR 153 365 0 7 671 229 250 14 14 chrX 11338610 11338679 -155311617 + (TTG)n Simple_repeat Simple_repeat 2 70 0 7 671 363 136 0 0 chrX 11338679 11338738 -155311558 + (TCC)n Simple_repeat Simple_repeat 3 61 0 7 671 676 201 56 21 chrX 11338751 11338893 -155311403 - B1_Mm SINE Alu 0 147 1 7 671 2014 187 37 0 chrX 11338894 11339242 -155311054 - MTC LTR MaLR -60 361 1 7 671 569 337 46 61 chrX 11339467 11339717 -155310579 - LTR33A LTR ERVL -257 263 33 7 671 234 294 15 0 chrX 11340017 11340085 -155310211 + LTR16C LTR ERVL 421 489 0 7 671 391 291 81 11 chrX 11341384 11341558 -155308738 - MLT1J LTR MaLR -227 285 100 7 671 1167 268 88 6 chrX 11341603 11341945 -155308351 + MLT1B LTR MaLR 1 370 -20 7 671 623 248 42 14 chrX 11342052 11342195 -155308101 + B1_Mur1 SINE Alu 3 149 0 7 671 799 215 34 0 chrX 11342974 11343123 -155307173 - RSINE1 SINE B4 -6 159 6 7 671 347 286 107 65 chrX 11343176 11343407 -155306889 + MLT1A1 LTR MaLR 136 408 0 7 671 332 244 156 0 chrX 11343618 11343702 -155306594 + B4A SINE B4 1 98 -194 7 671 423 234 113 16 chrX 11343702 11343873 -155306423 + B3A SINE B2 1 184 -9 7 671 856 270 28 42 chrX 11343867 11344080 -155306216 + B4A SINE B4 81 290 -2 7 671 198 0 0 0 chrX 11344110 11344132 -155306164 + (TG)n Simple_repeat Simple_repeat 1 22 0 7 671 432 0 0 0 chrX 11344132 11344179 -155306117 + (GA)n Simple_repeat Simple_repeat 1 48 0 7 671 227 268 58 11 chrX 11344579 11344666 -155305630 - L1MEd LINE L1 -893 1614 1524 7 671 724 260 88 46 chrX 11344666 11344928 -155305368 + RCHARR1 DNA MER1_type 2 274 -700 7 671 894 224 102 88 chrX 11344925 11345196 -155305100 + RCHARR1 DNA MER1_type 225 496 -478 7 671 923 129 139 12 chrX 11345196 11345369 -155304927 + B2_Mm2 SINE B2 1 195 0 7 671 894 224 102 88 chrX 11345369 11345440 -155304856 + RCHARR1 DNA MER1_type 497 572 -402 7 671 276 186 0 0 chrX 11345486 11345545 -155304751 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 7 671 727 207 111 6 chrX 11345546 11345726 -155304570 + RCHARR1 DNA MER1_type 529 727 -247 7 671 936 248 23 18 chrX 11345726 11345944 -155304352 + ID_B1 SINE B4 1 219 -5 7 671 292 274 14 108 chrX 11345951 11346064 -155304232 + RSINE1 SINE B4 40 140 -25 7 671 357 24 0 0 chrX 11346064 11346106 -155304190 + (TC)n Simple_repeat Simple_repeat 1 42 0 7 671 292 274 14 108 chrX 11346106 11346131 -155304165 + RSINE1 SINE B4 141 165 0 7 671 911 238 41 8 chrX 11346213 11346455 -155303841 + RCHARR1 DNA MER1_type 723 972 -2 7 671 623 311 89 67 chrX 11346479 11346964 -155303332 - L1MEd LINE L1 -1038 1469 873 7 671 355 262 46 31 chrX 11347258 11347388 -155302908 - MLT1A0 LTR MaLR 0 365 234 7 671 4420 159 65 76 chrX 11347421 11348333 -155301963 + RMER19B LTR ERVK 1 902 0 7 671 380 323 149 73 chrX 11348363 11348664 -155301632 + ORR1E LTR MaLR 10 333 -37 7 671 324 296 0 0 chrX 11348684 11348765 -155301531 - MLT1A0 LTR MaLR -240 134 54 7 671 832 328 36 48 chrX 11348769 11349125 -155301171 - ORR1E LTR MaLR -5 354 3 7 671 778 163 115 46 chrX 11349881 11350055 -155300241 + B2_Mm2 SINE B2 1 186 -9 7 671 1981 201 131 103 chrX 11350218 11350499 -155299797 - RMER19C LTR ERVK 0 611 309 7 671 3747 170 161 43 chrX 11350499 11351306 -155298990 - RMER19B LTR ERVK 0 902 1 7 671 1981 201 131 103 chrX 11351306 11351618 -155298678 - RMER19C LTR ERVK -303 308 1 7 671 735 210 65 0 chrX 11351625 11351763 -155298533 - B1_Mur1 SINE Alu -1 148 2 7 671 238 195 0 0 chrX 11351763 11351804 -155298492 - B3A SINE B2 -156 42 2 7 671 421 183 74 30 chrX 11352096 11352205 -155298091 + L1ME1 LINE L1 5726 5841 -338 7 671 587 207 17 17 chrX 11352264 11352382 -155297914 - PB1D9 SINE Alu 0 120 3 7 671 864 288 38 49 chrX 11352485 11352773 -155297523 + B4A SINE B4 3 287 -5 7 671 460 259 19 101 chrX 11352878 11353037 -155297259 - B1F1 SINE Alu -1 148 3 7 671 372 296 0 48 chrX 11352949 11353052 -155297244 - ID_B1 SINE B4 -57 167 70 7 671 385 315 158 65 chrX 11353944 11354331 -155295965 - L4 LINE RTE -971 1058 636 7 671 259 330 22 15 chrX 11354493 11354631 -155295665 - MIRc SINE MIR -96 166 31 8 671 207 129 0 61 chrX 11354687 11354753 -155295543 + T-rich Low_complexity Low_complexity 3 64 0 8 671 732 158 119 8 chrX 11354754 11354888 -155295408 - B1_Mur4 SINE Alu 0 150 2 8 671 257 250 15 30 chrX 11354926 11354992 -155295304 - MIRb SINE MIR -75 193 129 8 671 398 272 9 9 chrX 11355131 11355248 -155295048 + PB1D10 SINE Alu 1 125 -2 8 671 1269 249 20 95 chrX 11355496 11355905 -155294391 - MTEa LTR MaLR 0 379 2 8 671 466 386 6 0 chrX 11356491 11356649 -155293647 - MER63A DNA AcHobo -50 160 2 8 671 251 28 0 27 chrX 11357081 11357118 -155293178 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 8 671 396 0 0 0 chrX 11357599 11357643 -155292653 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 671 533 212 152 7 chrX 11357780 11357918 -155292378 - ID_B1 SINE B4 -9 215 58 8 671 419 33 33 0 chrX 11357918 11357978 -155292318 + (TCTG)n Simple_repeat Simple_repeat 2 63 0 8 671 268 275 77 90 chrX 11357978 11358004 -155292292 - B4 SINE B4 -232 60 38 8 671 516 276 0 0 chrX 11358051 11358167 -155292129 + PB1D10 SINE Alu 1 116 -1 8 671 207 0 0 0 chrX 11358943 11358966 -155291330 + (CAA)n Simple_repeat Simple_repeat 2 24 0 8 671 393 219 0 68 chrX 11359021 11359109 -155291187 - PB1D9 SINE Alu -17 103 22 8 671 248 309 0 23 chrX 11359910 11359996 -155290300 + MER45C DNA Tip100 7 90 -863 8 671 874 234 63 0 chrX 11360003 11360208 -155290088 + MER2 DNA MER2_type 2 219 -126 8 671 476 264 30 21 chrX 11360209 11360344 -155289952 + PB1D10 SINE Alu 6 147 0 8 671 363 279 13 0 chrX 11360340 11360419 -155289877 + MER2 DNA MER2_type 211 290 -55 8 671 1107 236 17 47 chrX 11361076 11361443 -155288853 + L1M2 LINE L1 3556 3914 -2232 8 671 573 265 8 0 chrX 11361627 11361744 -155288552 - ID_B1 SINE B4 -56 168 51 8 671 241 254 119 0 chrX 11361767 11361826 -155288470 - MER5A DNA MER1_type -121 68 3 8 671 724 276 16 26 chrX 11362456 11362646 -155287650 + B3A SINE B2 8 195 -3 8 671 1009 207 56 6 chrX 11362670 11362850 -155287446 + B3 SINE B2 3 191 -25 8 671 333 0 0 0 chrX 11362850 11362887 -155287409 + (TC)n Simple_repeat Simple_repeat 1 37 0 8 671 41 0 0 0 chrX 11362887 11362928 -155287368 + AT_rich Low_complexity Low_complexity 1 41 0 8 671 535 256 65 14 chrX 11363147 11363286 -155287010 - B1F SINE Alu -2 147 2 8 671 739 260 83 24 chrX 11363640 11363845 -155286451 + ID_B1 SINE B4 8 224 0 8 671 370 267 95 24 chrX 11363889 11363993 -155286303 + L1ME3 LINE L1 5619 5737 -425 8 671 456 19 0 0 chrX 11363993 11364046 -155286250 + (GA)n Simple_repeat Simple_repeat 1 53 0 8 671 370 267 95 24 chrX 11364046 11364110 -155286186 + L1ME3 LINE L1 5738 5798 -364 8 671 486 273 23 8 chrX 11364222 11364351 -155285945 + MTD LTR MaLR 9 139 -280 8 671 1181 35 21 7 chrX 11364351 11364496 -155285800 + B1_Mm SINE Alu 1 147 0 8 671 1119 214 86 43 chrX 11364532 11364811 -155285485 + MTD LTR MaLR 126 416 -3 8 671 302 348 12 18 chrX 11364835 11364999 -155285297 + L1ME3 LINE L1 6000 6162 0 8 671 368 88 0 17 chrX 11365161 11365219 -155285077 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 671 375 23 0 0 chrX 11365219 11365263 -155285033 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 671 186 355 71 16 chrX 11365294 11365420 -155284876 - MIRb SINE MIR -18 250 118 8 671 690 13 0 0 chrX 11365424 11365503 -155284793 + (TG)n Simple_repeat Simple_repeat 2 80 0 8 671 254 256 47 35 chrX 11365517 11365602 -155284694 - Charlie4a DNA MER1_type -252 256 171 8 671 340 175 43 89 chrX 11365695 11365792 -155284504 + MLT1A0 LTR MaLR 65 154 -254 8 671 889 204 72 34 chrX 11365792 11366000 -155284296 + B3 SINE B2 1 216 0 8 671 267 271 27 113 chrX 11366000 11366054 -155284242 + MLT1A0 LTR MaLR 155 203 -205 8 671 430 244 11 22 chrX 11366102 11366194 -155284102 + PB1D7 SINE Alu 14 104 -16 8 671 501 141 0 0 chrX 11366194 11366293 -155284003 + (TGG)n Simple_repeat Simple_repeat 3 101 0 8 671 301 233 0 65 chrX 11366328 11366420 -155283876 + MLT1A0 LTR MaLR 323 408 0 8 671 297 312 53 53 chrX 11366420 11366572 -155283724 - Charlie4a DNA MER1_type -333 175 24 8 671 183 129 0 0 chrX 11367236 11367267 -155283029 + (AGGGGG)n Simple_repeat Simple_repeat 2 32 0 8 671 286 131 35 53 chrX 11367283 11367396 -155282900 + (CAGAGA)n Simple_repeat Simple_repeat 2 112 0 8 671 283 338 120 0 chrX 11367445 11367587 -155282709 + Lx8 LINE L1 7113 7271 -202 8 671 211 269 0 0 chrX 11367751 11367803 -155282493 + (CATG)n Simple_repeat Simple_repeat 3 54 0 8 671 555 292 118 0 chrX 11367803 11367981 -155282315 - B3 SINE B2 -17 199 1 8 671 226 296 65 106 chrX 11368868 11368888 -155281408 + B4A SINE B4 69 179 -113 8 671 578 220 49 14 chrX 11368888 11369031 -155281265 + B1F SINE Alu 1 148 -1 8 671 214 304 159 0 chrX 11369107 11369176 -155281120 + ID4_ SINE ID 2 81 -2 8 671 246 256 0 0 chrX 11369187 11369265 -155281031 + (TAGA)n Simple_repeat Simple_repeat 1 78 0 8 671 435 38 0 0 chrX 11369271 11369324 -155280972 + (GAAA)n Simple_repeat Simple_repeat 2 54 0 8 671 248 167 0 0 chrX 11369412 11369460 -155280836 + B1_Mus2 SINE Alu 100 147 0 8 671 207 196 0 0 chrX 11369460 11369506 -155280790 + A-rich Low_complexity Low_complexity 1 46 0 8 671 426 187 13 13 chrX 11369615 11369691 -155280605 + RSINE1 SINE B4 88 163 -2 8 671 806 200 6 68 chrX 11369972 11370149 -155280147 - B3A SINE B2 -4 194 29 8 671 592 156 191 9 chrX 11370772 11370882 -155279414 + B1F SINE Alu 5 134 -15 8 671 244 189 38 0 chrX 11371125 11371178 -155279118 + ID4 SINE ID 3 57 -26 8 671 294 29 0 0 chrX 11371233 11371268 -155279028 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 8 671 3763 49 21 17 chrX 11371662 11372135 -155278161 - L1Md_F2 LINE L1 0 6582 6108 8 671 471 73 0 0 chrX 11372998 11373066 -155277230 + (TC)n Simple_repeat Simple_repeat 1 68 0 8 671 961 130 27 0 chrX 11374023 11374169 -155276127 - B1_Mur4 SINE Alu 0 150 1 8 671 211 361 160 8 chrX 11374694 11374825 -155275471 - L2 LINE L2 -532 2887 2737 8 671 702 162 6 11 chrX 11375323 11375504 -155274792 + CT-rich Low_complexity Low_complexity 1 180 0 8 671 234 0 0 0 chrX 11375546 11375572 -155274724 + (TGGGGG)n Simple_repeat Simple_repeat 3 28 0 8 671 718 179 56 28 chrX 11375757 11375901 -155274395 + B1F SINE Alu 1 148 -1 8 671 290 266 38 0 chrX 11376184 11376263 -155274033 + ID SINE ID 7 88 -136 8 671 325 256 0 20 chrX 11376263 11376281 -155274015 + ID4_ SINE ID 7 98 -54 8 671 393 22 0 0 chrX 11376661 11376707 -155273589 + (GTTTG)n Simple_repeat Simple_repeat 1 46 0 8 671 333 0 0 0 chrX 11376797 11376834 -155273462 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 671 324 0 0 0 chrX 11376834 11376869 -155273427 + (GA)n Simple_repeat Simple_repeat 2 37 0 8 671 470 346 94 34 chrX 11376921 11377241 -155273055 - LTR16A LTR ERVL -8 443 105 8 671 207 351 106 0 chrX 11378194 11378288 -155272008 - L2c LINE L2 -6 3381 3278 8 671 367 331 16 16 chrX 11378304 11378433 -155271863 - MER94 DNA AcHobo -5 129 1 8 671 924 294 65 74 chrX 11378614 11379048 -155271248 + MER63B DNA AcHobo 7 436 0 8 671 390 313 142 29 chrX 11379514 11379754 -155270542 - LTR33 LTR ERVL -202 313 47 8 671 186 43 0 0 chrX 11380138 11380161 -155270135 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 8 671 309 248 122 19 chrX 11380426 11380533 -155269763 - MER103 DNA DNA -48 118 1 8 671 1925 155 84 14 chrX 11382118 11382485 -155267811 + MTD LTR MaLR 5 397 -22 8 671 198 0 0 0 chrX 11383034 11383056 -155267240 + (CA)n Simple_repeat Simple_repeat 1 22 0 8 671 216 0 0 0 chrX 11383056 11383079 -155267217 + (GA)n Simple_repeat Simple_repeat 2 25 0 8 671 24 77 0 0 chrX 11384734 11384786 -155265510 + GC_rich Low_complexity Low_complexity 1 52 0 8 671 202 220 35 47 chrX 11385555 11385638 -155264658 + MIR SINE MIR 42 117 -151 8 671 373 305 84 14 chrX 11385868 11386011 -155264285 + L2a LINE L2 3269 3421 -5 8 671 253 317 89 24 chrX 11386058 11386181 -155264115 + MLT1G3 LTR MaLR 2 132 -463 8 671 221 397 8 8 chrX 11386708 11386825 -155263471 - MIRb SINE MIR -126 142 26 8 671 357 24 0 0 chrX 11388008 11388050 -155262246 + (TG)n Simple_repeat Simple_repeat 1 42 0 8 671 374 0 22 0 chrX 11388117 11388163 -155262133 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 671 586 287 78 48 chrX 11388762 11389033 -155261263 - ORR1D2 LTR MaLR -7 363 85 8 671 1006 248 0 20 chrX 11389563 11389765 -155260531 - B3 SINE B2 -4 212 15 8 671 361 276 51 0 chrX 11390554 11390652 -155259644 + PB1D10 SINE Alu 1 103 -14 8 671 369 0 0 0 chrX 11390652 11390693 -155259603 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 8 671 362 282 37 55 chrX 11390733 11390842 -155259454 + RSINE1 SINE B4 59 165 0 8 671 343 311 90 8 chrX 11391207 11391220 -155259076 - ID_B1 SINE B4 -2 222 82 8 671 345 325 17 0 chrX 11391220 11391337 -155258959 - B1F SINE Alu -30 119 1 8 671 483 220 77 0 chrX 11391623 11391714 -155258582 + PB1D10 SINE Alu 1 98 -19 8 671 234 0 0 0 chrX 11391714 11391740 -155258556 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 8 671 815 248 50 45 chrX 11391751 11391971 -155258325 + ID_B1 SINE B4 2 222 -2 8 671 381 43 0 0 chrX 11392791 11392838 -155257458 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 671 288 0 0 0 chrX 11392924 11392956 -155257340 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 671 254 305 65 19 chrX 11393127 11393234 -155257062 + MLT1H LTR MaLR 57 168 -381 8 671 226 303 30 0 chrX 11393462 11393528 -155256768 - MIR SINE MIR -163 99 32 8 671 1194 78 11 11 chrX 11393701 11394052 -155256244 + (CCA)n Simple_repeat Simple_repeat 1 351 0 9 671 1070 109 69 0 chrX 11394138 11394313 -155255983 - B2_Mm2 SINE B2 -7 188 2 9 671 612 248 56 7 chrX 11394316 11394458 -155255838 - B1_Mur1 SINE Alu 0 149 1 9 671 234 297 40 26 chrX 11394720 11394796 -155255500 - ID2 SINE ID -6 77 1 9 671 544 316 15 0 chrX 11394826 11394962 -155255334 - RSINE1 SINE B4 -4 161 24 9 671 242 276 35 95 chrX 11394997 11395017 -155255279 - MT2B2 LTR ERVL -319 265 192 9 671 349 276 11 22 chrX 11395017 11395106 -155255190 - PB1D10 SINE Alu -29 88 1 9 671 553 183 242 0 chrX 11395127 11395247 -155255049 - B1_Mur1 SINE Alu 0 149 1 9 671 243 0 0 0 chrX 11395355 11395382 -155254914 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 9 671 1140 71 0 0 chrX 11395384 11395524 -155254772 - B1_Mm SINE Alu -7 140 1 9 671 441 338 42 48 chrX 11395835 11396124 -155254172 + MLT1A0 LTR MaLR 62 348 -17 9 671 555 284 0 63 chrX 11396174 11396332 -155253964 - B1F2 SINE Alu 0 149 2 9 671 278 385 19 0 chrX 11396336 11396440 -155253856 - MLT1H2 LTR MaLR -325 164 59 9 671 182 321 12 36 chrX 11397086 11397170 -155253126 + MIRc SINE MIR 27 108 -160 9 671 369 43 0 0 chrX 11397394 11397441 -155252855 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 671 1828 220 29 22 chrX 11397444 11397858 -155252438 + MTD LTR MaLR 3 419 0 9 671 225 266 47 162 chrX 11397901 11398049 -155252247 + MT2B LTR ERVL 153 283 -318 9 671 689 182 0 50 chrX 11397918 11398057 -155252239 + B1_Mur1 SINE Alu 11 142 -7 9 671 369 301 16 47 chrX 11400217 11400469 -155249827 + GA-rich Low_complexity Low_complexity 1 244 0 9 671 297 328 21 105 chrX 11402689 11402832 -155247464 + B4A SINE B4 48 178 -114 9 671 301 260 0 110 chrX 11402862 11402944 -155247352 + RSINE1 SINE B4 93 165 0 9 671 22 56 0 0 chrX 11402946 11402982 -155247314 + AT_rich Low_complexity Low_complexity 1 36 0 9 671 297 100 0 0 chrX 11403068 11403118 -155247178 + (TTGG)n Simple_repeat Simple_repeat 2 51 0 9 83 493 267 48 108 chrX 11403166 11403544 -155246752 + L1MC4 LINE L1 7678 8032 -10 9 672 210 118 0 0 chrX 11403823 11403857 -155246439 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 9 672 376 287 19 50 chrX 11404695 11404862 -155245434 - MER3 DNA MER1_type -201 123 2 9 672 375 60 0 0 chrX 11405066 11405116 -155245180 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 672 299 348 17 10 chrX 11405333 11405457 -155244839 - ID4_ SINE ID -19 133 8 9 672 401 292 9 0 chrX 11405465 11405571 -155244725 - PB1D10 SINE Alu -1 116 10 9 672 320 303 9 60 chrX 11405485 11405601 -155244695 - ID_B1 SINE B4 -48 176 67 9 672 407 320 69 10 chrX 11405657 11405911 -155244385 - L1M5 LINE L1 -427 5737 5460 9 672 246 195 0 0 chrX 11407136 11407177 -155243119 - ID SINE ID -181 43 3 9 672 372 94 0 0 chrX 11407254 11407307 -155242989 + (TG)n Simple_repeat Simple_repeat 1 53 0 9 672 958 259 29 96 chrX 11407315 11407627 -155242669 - B4 SINE B4 0 292 2 9 672 297 296 25 0 chrX 11407636 11407717 -155242579 - PB1D10 SINE Alu 0 117 35 9 672 1005 242 5 0 chrX 11407769 11407984 -155242312 - B3 SINE B2 0 216 1 9 672 306 0 0 0 chrX 11407990 11408024 -155242272 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 9 672 901 57 106 0 chrX 11408024 11408147 -155242149 - B1_Mus1 SINE Alu -12 136 1 9 672 517 260 68 14 chrX 11408327 11408475 -155241821 + RSINE1 SINE B4 4 159 -6 9 672 271 229 135 54 chrX 11408491 11408602 -155241694 + L2a LINE L2 3304 3423 -3 9 672 225 250 144 152 chrX 11409121 11409187 -155241109 + PB1D10 SINE Alu 1 83 -34 9 672 3271 61 2 2 chrX 11409187 11409583 -155240713 - MTA_Mm LTR MaLR 0 396 1 9 672 225 250 144 152 chrX 11409583 11409634 -155240662 + PB1D10 SINE Alu 84 117 0 9 672 824 282 37 44 chrX 11409646 11409917 -155240379 + B4A SINE B4 24 292 0 9 672 892 129 264 0 chrX 11410505 11410683 -155239613 - URR1B DNA MER1_type 0 225 1 9 672 205 255 59 0 chrX 11410685 11410736 -155239560 + L2a LINE L2 3303 3356 -70 9 672 456 311 199 26 chrX 11410815 11411046 -155239250 - MLT1G LTR MaLR -2 589 319 9 672 1513 63 16 0 chrX 11411046 11411236 -155239060 + B2_Mm1t SINE B2 1 193 0 9 672 283 247 48 152 chrX 11411259 11411364 -155238932 - MLT1G LTR MaLR -261 330 237 9 672 427 229 0 0 chrX 11411495 11411578 -155238718 - ID4 SINE ID 0 83 1 9 672 1194 214 0 5 chrX 11411591 11411807 -155238489 + B3 SINE B2 2 216 0 9 672 874 239 9 54 chrX 11411868 11412089 -155238207 + B3 SINE B2 1 211 -5 9 672 673 269 0 0 chrX 11412268 11412402 -155237894 + ID_B1 SINE B4 87 220 -4 9 672 242 318 20 118 chrX 11412286 11412439 -155237857 - YREP_Mm Unknown Unknown -1519 293 156 9 672 756 261 78 78 chrX 11412450 11412732 -155237564 + B4 SINE B4 3 284 -8 9 672 240 86 0 0 chrX 11412735 11412770 -155237526 + (CA)n Simple_repeat Simple_repeat 2 36 0 9 672 1683 152 136 24 chrX 11413408 11413738 -155236558 + ORR1B2 LTR MaLR 1 367 0 9 672 247 269 38 57 chrX 11414691 11414849 -155235447 + GA-rich Low_complexity Low_complexity 4 158 0 9 672 803 187 15 0 chrX 11415353 11415487 -155234809 + B1_Mur1 SINE Alu 5 140 -9 9 672 1076 51 11 28 chrX 11415488 11415670 -155234626 + (CA)n Simple_repeat Simple_repeat 2 180 0 9 672 385 298 201 20 chrX 11415840 11416140 -155234156 + MLT1A0 LTR MaLR 12 365 0 9 672 183 42 0 0 chrX 11416719 11416743 -155233553 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 9 672 972 208 17 42 chrX 11417281 11417522 -155232774 + MER33 DNA MER1_type 14 248 -76 9 672 378 0 0 0 chrX 11417847 11417889 -155232407 + (GA)n Simple_repeat Simple_repeat 1 42 0 9 672 453 210 0 0 chrX 11418753 11418834 -155231462 + ID4 SINE ID 2 82 -1 9 672 277 266 202 0 chrX 11418861 11418970 -155231326 - MLT1B LTR MaLR -49 341 211 9 672 831 136 68 0 chrX 11418981 11419113 -155231183 - B1_Mur3 SINE Alu -8 141 1 9 672 712 269 58 87 chrX 11419133 11419144 -155231152 - B4 SINE B4 -11 281 272 9 672 1368 67 0 0 chrX 11419144 11419324 -155230972 + (TG)n Simple_repeat Simple_repeat 1 180 0 9 672 712 269 58 87 chrX 11419324 11419589 -155230707 - B4 SINE B4 -21 271 13 9 672 1073 101 32 0 chrX 11419633 11419791 -155230505 - B2_Mm2 SINE B2 -30 165 3 9 672 235 281 45 79 chrX 11420396 11420485 -155229811 + RSINE1 SINE B4 79 164 -1 9 672 814 271 32 18 chrX 11420531 11420749 -155229547 + ID_B1 SINE B4 1 221 -3 9 672 564 267 0 0 chrX 11420877 11420993 -155229303 - PB1D7 SINE Alu 0 120 5 9 672 628 244 11 92 chrX 11421038 11421233 -155229063 + B4 SINE B4 67 244 -48 9 672 373 306 9 53 chrX 11421355 11421469 -155228827 + PB1D10 SINE Alu 1 109 -8 9 672 663 239 14 28 chrX 11421510 11421652 -155228644 + B3A SINE B2 57 196 -2 9 672 273 354 110 42 chrX 11421728 11421846 -155228450 + MLT1G3 LTR MaLR 232 357 -238 9 672 590 302 12 19 chrX 11422047 11422209 -155228087 - RSINE1 SINE B4 -2 163 3 9 672 355 240 52 198 chrX 11422304 11422496 -155227800 + RSINE1 SINE B4 2 165 0 9 672 462 36 0 0 chrX 11424074 11424130 -155226166 + (CA)n Simple_repeat Simple_repeat 2 57 0 9 672 1031 66 65 26 chrX 11424880 11425035 -155225261 - B2_Mm2 SINE B2 -32 163 3 9 672 226 237 78 13 chrX 11425692 11425769 -155224527 - MIRc SINE MIR -28 240 159 9 672 602 202 0 0 chrX 11425945 11426049 -155224247 + PB1D10 SINE Alu 4 107 -10 9 672 408 279 96 0 chrX 11426390 11426494 -155223802 + RSINE1 SINE B4 21 134 -31 9 672 810 289 0 22 chrX 11426547 11426731 -155223565 + B3 SINE B2 3 182 -34 9 672 183 132 18 54 chrX 11426742 11426798 -155223498 + GA-rich Low_complexity Low_complexity 6 59 0 9 672 361 279 54 9 chrX 11426813 11426925 -155223371 + Lx8 LINE L1 7221 7337 -136 9 672 584 217 65 0 chrX 11426946 11427084 -155223212 + B1F1 SINE Alu 3 149 0 9 672 248 119 108 95 chrX 11427160 11427234 -155223062 - MLT1H-int LTR MaLR -1307 102 28 9 672 460 250 29 142 chrX 11427381 11427586 -155222710 - MTEa LTR MaLR 0 379 198 9 672 811 104 0 0 chrX 11427609 11427715 -155222581 + U6 snRNA snRNA 1 106 -1 9 672 5803 116 16 27 chrX 11427715 11428669 -155221627 + Lx2B LINE L1 6034 6976 -24 9 672 407 255 18 45 chrX 11428785 11428896 -155221400 - MLT2B3 LTR ERVL -427 127 20 9 672 305 267 10 100 chrX 11428814 11428914 -155221382 - MTEa LTR MaLR -287 92 2 9 672 374 322 0 0 chrX 11428988 11429075 -155221221 - MLT1H2 LTR MaLR -335 154 68 9 672 247 267 50 0 chrX 11429301 11429402 -155220894 + L1M5 LINE L1 5715 5820 -344 9 672 282 56 0 0 chrX 11429435 11429471 -155220825 + (CA)n Simple_repeat Simple_repeat 1 36 0 9 672 215 362 0 36 chrX 11429562 11429645 -155220651 + 7SLRNA srpRNA srpRNA 6 85 -229 9 672 236 155 27 27 chrX 11429964 11430037 -155220259 + G-rich Low_complexity Low_complexity 2 74 0 9 672 225 0 0 0 chrX 11430065 11430090 -155220206 + (GCCTG)n Simple_repeat Simple_repeat 4 28 0 9 672 287 198 29 29 chrX 11430472 11430576 -155219720 + GA-rich Low_complexity Low_complexity 2 105 0 9 672 405 213 12 191 chrX 11432084 11432143 -155218153 + MLT1B LTR MaLR 122 169 -221 9 672 381 170 223 0 chrX 11432143 11432237 -155218059 + PB1D10 SINE Alu 3 117 0 9 672 405 213 12 191 chrX 11432237 11432345 -155217951 + MLT1B LTR MaLR 170 259 -131 9 672 558 233 44 15 chrX 11432346 11432481 -155217815 + ID_B1 SINE B4 82 220 -4 1 672 907 270 5 27 chrX 11432483 11432704 -155217592 + ID_B1 SINE B4 5 220 -4 1 672 195 42 0 0 chrX 11432705 11432729 -155217567 + (CCA)n Simple_repeat Simple_repeat 1 24 0 1 672 521 311 34 93 chrX 11432760 11433066 -155217230 + B4 SINE B4 27 286 -6 1 672 670 236 14 7 chrX 11433648 11433793 -155216503 + B1F1 SINE Alu 1 146 -3 1 672 309 367 53 0 chrX 11434062 11434212 -155216084 + MLT1B LTR MaLR 349 506 -6 9 672 1175 255 36 42 chrX 11434442 11434774 -155215522 - MTEa LTR MaLR -37 342 13 1 672 317 299 0 0 chrX 11434932 11435009 -155215287 + ID2 SINE ID 2 78 -5 1 672 326 315 8 30 chrX 11435097 11435228 -155215068 + CT-rich Low_complexity Low_complexity 1 128 0 1 672 213 195 0 0 chrX 11435250 11435291 -155215005 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 672 514 280 82 12 chrX 11435966 11436136 -155214160 + MLT1G1 LTR MaLR 25 206 -373 1 672 248 250 241 0 chrX 11436492 11436600 -155213696 + MIRb SINE MIR 123 256 -12 1 672 354 270 0 83 chrX 11436922 11437043 -155213253 - MLT1A1 LTR MaLR -7 401 291 1 672 367 200 8 52 chrX 11437165 11437278 -155213018 + PB1D10 SINE Alu 15 120 0 1 672 232 265 0 42 chrX 11437305 11437376 -155212920 - MLT1A1 LTR MaLR -291 74 7 1 672 225 0 0 0 chrX 11438880 11438905 -155211391 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 672 207 0 0 0 chrX 11439535 11439558 -155210738 + (CCCCAG)n Simple_repeat Simple_repeat 1 23 0 1 672 306 0 0 0 chrX 11439738 11439772 -155210524 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 672 279 71 0 0 chrX 11439772 11439814 -155210482 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 672 494 262 226 25 chrX 11439815 11440058 -155210238 - B4A SINE B4 0 292 1 1 672 434 250 110 0 chrX 11440925 11441025 -155209271 + PB1D10 SINE Alu 1 111 -6 1 672 339 242 0 0 chrX 11441112 11441174 -155209122 - ID4_ SINE ID -16 67 6 1 672 485 231 0 33 chrX 11441194 11441315 -155208981 - PB1D10 SINE Alu 0 117 1 1 672 490 264 27 18 chrX 11441338 11441450 -155208846 - PB1D10 SINE Alu -2 115 3 1 672 240 301 57 89 chrX 11441450 11441497 -155208799 - B4A SINE B4 -202 90 48 1 672 354 284 18 44 chrX 11443008 11443122 -155207174 + ID_B1 SINE B4 73 183 -41 1 672 483 211 16 0 chrX 11443025 11443126 -155207170 + B1F SINE Alu 10 115 -5 1 672 442 324 47 31 chrX 11443209 11443400 -155206896 - LTR16E1 LTR ERVL -45 493 300 1 672 287 375 73 73 chrX 11444218 11444382 -155205914 + MLT1I LTR MaLR 6 169 -242 1 672 767 249 47 12 chrX 11444923 11445094 -155205202 + B3 SINE B2 12 188 -28 1 672 372 43 0 0 chrX 11445094 11445140 -155205156 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 672 257 273 193 35 chrX 11445168 11445282 -155205014 + MLT1I LTR MaLR 263 394 -50 1 672 705 274 93 104 chrX 11445281 11445656 -155204640 - MLT1I LTR MaLR -39 372 2 1 672 979 76 0 8 chrX 11445982 11446114 -155204182 - B1_Mus2 SINE Alu -2 145 15 1 672 216 97 0 0 chrX 11446186 11446217 -155204079 + (TCC)n Simple_repeat Simple_repeat 2 32 0 1 672 762 254 93 0 chrX 11446267 11446460 -155203836 - B3 SINE B2 -5 211 1 1 672 304 310 68 8 chrX 11446460 11446577 -155203719 + MIR SINE MIR 78 201 -61 1 672 284 189 14 0 chrX 11446607 11446681 -155203615 + (ATG)n Simple_repeat Simple_repeat 1 75 0 1 672 413 301 19 13 chrX 11446722 11446880 -155203416 - HAL1-2a_MD LINE L1 -517 2507 2349 1 672 414 0 0 0 chrX 11447101 11447147 -155203149 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 672 564 186 192 8 chrX 11447417 11447542 -155202754 + B1_Mur1 SINE Alu 2 149 0 1 672 578 256 0 116 chrX 11447553 11447708 -155202588 + ID_B1 SINE B4 2 138 -86 1 672 2356 137 33 0 chrX 11447866 11448232 -155202064 - ORR1C1 LTR MaLR 0 378 1 1 672 565 218 95 70 chrX 11448492 11448689 -155201607 + L1MB3 LINE L1 5925 6129 -54 1 672 970 210 5 44 chrX 11448689 11448893 -155201403 + B3A SINE B2 3 198 0 1 672 565 218 95 70 chrX 11448893 11448937 -155201359 + L1MB3 LINE L1 6130 6172 -11 1 672 1022 126 7 0 chrX 11449026 11449169 -155201127 - B1_Mur3 SINE Alu -5 144 1 1 672 756 133 6 106 chrX 11449926 11450086 -155200210 - B1_Mur4 SINE Alu 0 150 7 1 672 272 279 61 26 chrX 11450117 11450231 -155200065 - MTE2a LTR MaLR -2 377 260 1 672 1433 269 49 6 chrX 11450238 11450582 -155199714 - MTE2b LTR MaLR -17 362 4 1 672 331 267 23 0 chrX 11450703 11450789 -155199507 - ORR1E LTR MaLR -271 88 1 1 672 247 357 61 0 chrX 11450802 11450900 -155199396 + L2b LINE L2 3257 3360 -15 1 672 455 292 31 43 chrX 11451188 11451349 -155198947 - MamRep38 DNA hAT -6 289 131 1 672 578 248 64 25 chrX 11452543 11452700 -155197596 + RSINE1 SINE B4 3 165 0 1 672 21 0 0 0 chrX 11452715 11452736 -155197560 + AT_rich Low_complexity Low_complexity 1 21 0 1 672 505 240 148 43 chrX 11452801 11453005 -155197291 + B3A SINE B2 2 216 0 1 672 249 240 0 0 chrX 11453285 11453335 -155196961 + GA-rich Low_complexity Low_complexity 1 50 0 1 672 331 243 19 38 chrX 11454280 11454386 -155195910 + PB1D7 SINE Alu 17 120 0 1 672 332 182 0 0 chrX 11454421 11454476 -155195820 + B1F2 SINE Alu 12 66 -83 1 672 956 323 3 46 chrX 11454869 11455174 -155195122 - B4A SINE B4 0 292 1 1 672 378 0 0 0 chrX 11455208 11455250 -155195046 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 672 602 219 26 9 chrX 11455827 11455942 -155194354 + B1_Mus2 SINE Alu 2 118 -29 1 672 1094 171 34 59 chrX 11455955 11456059 -155194237 - ORR1D1 LTR MaLR -144 230 126 1 672 1692 31 0 0 chrX 11456059 11456251 -155194045 + B2_Mm1a SINE B2 2 193 0 1 672 1094 171 34 59 chrX 11456251 11456382 -155193914 - ORR1D1 LTR MaLR -249 125 1 1 672 23 33 0 0 chrX 11456513 11456543 -155193753 + AT_rich Low_complexity Low_complexity 1 30 0 1 672 217 238 0 0 chrX 11456580 11456622 -155193674 + PB1 SINE Alu 84 125 -2 1 672 877 208 52 6 chrX 11457172 11457346 -155192950 + ORR1C2 LTR MaLR 1 182 -192 1 672 694 169 35 11 chrX 11457346 11457520 -155192776 + C-rich Low_complexity Low_complexity 1 178 0 1 672 1186 199 0 5 chrX 11457523 11457735 -155192561 + ORR1C2 LTR MaLR 174 384 0 1 672 612 279 13 7 chrX 11457855 11458010 -155192286 - B4A SINE B4 -136 156 1 1 672 304 267 10 62 chrX 11458170 11458266 -155192030 + ID4 SINE ID 3 93 -59 1 672 240 377 30 76 chrX 11458266 11458368 -155191928 + ID_B1 SINE B4 3 191 -33 1 672 248 343 25 99 chrX 11460294 11460322 -155189974 - B2_Mm1t SINE B2 -3 190 5 1 672 680 247 0 87 chrX 11460322 11460495 -155189801 - RSINE1 SINE B4 -2 163 6 1 672 331 267 38 9 chrX 11460498 11460604 -155189692 - BC1_Mm scRNA scRNA -37 115 7 1 672 411 329 165 26 chrX 11460838 11461141 -155189155 - LTR16A LTR ERVL -88 363 19 1 672 964 105 0 0 chrX 11462564 11462697 -155187599 - B1_Mus2 SINE Alu -2 145 13 1 672 226 310 107 46 chrX 11462822 11463018 -155187278 + MIRc SINE MIR 45 252 -16 1 672 501 309 22 40 chrX 11463047 11463253 -155187043 + MLT1G LTR MaLR 10 254 -341 1 672 225 340 21 31 chrX 11463337 11463434 -155186862 + MLT1G LTR MaLR 460 555 -40 1 672 270 0 0 0 chrX 11463726 11463756 -155186540 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 672 811 236 136 31 chrX 11464061 11464319 -155185977 + RMER15 LTR ERVL 277 561 -14 1 672 1005 92 0 0 chrX 11465257 11465399 -155184897 + (TCTCCC)n Simple_repeat Simple_repeat 1 142 0 1 672 272 224 15 15 chrX 11465838 11465906 -155184390 - MIRb SINE MIR -77 191 124 1 672 246 32 0 0 chrX 11466017 11466048 -155184248 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 672 360 278 84 25 chrX 11466151 11466264 -155184032 - PB1 SINE Alu -2 125 12 1 672 564 232 72 7 chrX 11466313 11466452 -155183844 - RSINE1 SINE B4 -15 150 3 1 672 195 42 0 0 chrX 11466537 11466561 -155183735 + (TTCCC)n Simple_repeat Simple_repeat 1 24 0 1 672 474 70 0 0 chrX 11466561 11466631 -155183665 + (CCTG)n Simple_repeat Simple_repeat 2 72 0 1 672 207 0 0 0 chrX 11467334 11467357 -155182939 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 1 672 418 320 89 52 chrX 11467366 11467636 -155182660 - B4A SINE B4 -11 281 2 1 672 2649 117 40 23 chrX 11467891 11468321 -155181975 + RMER10A LTR ERVL 6 442 0 1 672 809 286 66 15 chrX 11468556 11468815 -155181481 + B4A SINE B4 2 273 -19 1 672 488 202 73 14 chrX 11469436 11469584 -155180712 + PB1D7 SINE Alu 1 147 -2 1 672 531 0 0 0 chrX 11471037 11471096 -155179200 + (TCC)n Simple_repeat Simple_repeat 3 61 0 1 672 468 0 0 0 chrX 11471699 11471751 -155178545 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 672 387 0 0 0 chrX 11471751 11471794 -155178502 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 672 351 113 0 0 chrX 11472210 11472263 -155178033 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 672 932 180 81 68 chrX 11472993 11473214 -155177082 - URR1B DNA MER1_type 0 225 2 1 672 252 337 78 45 chrX 11473544 11473700 -155176596 - MIR3 SINE MIR -107 169 3 1 672 972 48 0 0 chrX 11474286 11474412 -155175884 + (TCTCCC)n Simple_repeat Simple_repeat 6 131 0 1 672 510 114 0 0 chrX 11474475 11474554 -155175742 + (TC)n Simple_repeat Simple_repeat 1 79 0 1 672 378 211 0 0 chrX 11475900 11475971 -155174325 - ID4 SINE ID -1 82 12 1 672 517 286 68 26 chrX 11476250 11476440 -155173856 - MIR SINE MIR -61 201 4 1 672 314 283 88 51 chrX 11476488 11476641 -155173655 + MIRb SINE MIR 32 196 -72 1 672 509 245 20 0 chrX 11477463 11477561 -155172735 - PB1D7 SINE Alu -11 109 10 1 672 783 321 87 51 chrX 11477755 11478169 -155172127 - MLT1G1 LTR MaLR -1 578 150 1 672 580 286 77 5 chrX 11478575 11478782 -155171514 + ID_B1 SINE B4 3 224 0 1 672 225 309 36 24 chrX 11479711 11479794 -155170502 - MLT1H1 LTR MaLR -44 511 428 1 672 374 273 56 28 chrX 11480139 11480282 -155170014 + B3A SINE B2 52 198 0 1 672 855 329 43 16 chrX 11480282 11480535 -155169761 + B4 SINE B4 3 262 -30 1 672 351 0 0 0 chrX 11480540 11480579 -155169717 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 672 759 262 26 74 chrX 11480659 11480890 -155169406 + MLT1B LTR MaLR 31 250 -140 1 672 238 227 180 36 chrX 11481943 11482049 -155168247 - MIR SINE MIR -138 138 24 1 672 386 308 46 8 chrX 11482223 11482354 -155167942 + B1F2 SINE Alu 1 136 -13 1 672 682 54 0 43 chrX 11482368 11482485 -155167811 + (TCCCC)n Simple_repeat Simple_repeat 5 116 0 1 672 746 262 38 19 chrX 11482538 11482748 -155167548 + ID_B1 SINE B4 5 218 -6 1 672 213 213 229 0 chrX 11483411 11483472 -155166824 - B1F SINE Alu -2 147 73 1 672 426 336 119 22 chrX 11483749 11483842 -155166454 - L1M5 LINE L1 -354 5810 5718 1 672 455 327 0 0 chrX 11483842 11483949 -155166347 - PB1D7 SINE Alu -11 109 3 1 672 426 336 119 22 chrX 11483949 11483970 -155166326 - L1M5 LINE L1 -447 5717 5694 1 672 450 0 0 0 chrX 11483970 11484020 -155166276 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 672 300 27 0 0 chrX 11484020 11484056 -155166240 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 672 426 336 119 22 chrX 11484056 11484301 -155165995 - L1M5 LINE L1 -471 5693 5416 1 672 230 296 157 0 chrX 11485073 11485181 -155165115 + MLT1J LTR MaLR 324 448 -64 1 672 598 296 0 0 chrX 11485450 11485575 -155164721 - RSINE1 SINE B4 -37 128 4 1 672 264 306 86 31 chrX 11485810 11485938 -155164358 - ORR1E LTR MaLR -221 138 4 1 672 532 260 20 14 chrX 11485938 11486086 -155164210 + B1F2 SINE Alu 1 149 0 1 672 185 0 40 0 chrX 11486086 11486111 -155164185 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 1 672 398 285 146 0 chrX 11486113 11486243 -155164053 + B1_Mur2 SINE Alu 1 149 0 1 672 440 250 147 0 chrX 11486649 11486765 -155163531 + ID_B1 SINE B4 92 224 0 1 672 639 276 83 36 chrX 11486868 11487060 -155163236 + B4A SINE B4 1 201 -91 1 672 243 0 0 0 chrX 11487105 11487132 -155163164 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 672 763 213 7 22 chrX 11487319 11487458 -155162838 - RSINE1 SINE B4 -25 140 4 1 672 286 242 0 16 chrX 11487459 11487522 -155162774 + PB1D10 SINE Alu 55 116 -1 1 672 433 309 108 55 chrX 11487702 11488045 -155162251 + L1ME2 LINE L1 5672 6032 -132 1 672 24 0 0 0 chrX 11488166 11488190 -155162106 + AT_rich Low_complexity Low_complexity 1 24 0 1 672 430 277 55 88 chrX 11489233 11489415 -155160881 + MLT1F2 LTR MaLR 3 178 -382 1 672 956 253 37 49 chrX 11489430 11489675 -155160621 + MTE2b LTR MaLR 1 242 -137 1 672 380 345 41 78 chrX 11489759 11490004 -155160292 + MLT1F2 LTR MaLR 282 517 -52 1 672 215 175 0 24 chrX 11490595 11490636 -155159660 + T-rich Low_complexity Low_complexity 1 40 0 1 672 198 0 0 0 chrX 11491202 11491224 -155159072 + (CAAGC)n Simple_repeat Simple_repeat 4 25 0 1 672 329 169 172 43 chrX 11491348 11491441 -155158855 + PB1D7 SINE Alu 1 105 -15 1 672 371 360 63 0 chrX 11491562 11491737 -155158559 - MLT1B LTR MaLR -13 377 192 1 672 827 179 7 21 chrX 11491857 11492000 -155158296 - B1_Mur4 SINE Alu -8 142 2 1 672 568 261 68 6 chrX 11492227 11492404 -155157892 - B3A SINE B2 -10 188 1 1 672 300 247 88 22 chrX 11492408 11492499 -155157797 - MLT1B LTR MaLR -286 104 8 1 672 543 248 7 68 chrX 11492938 11493085 -155157211 - MTEa LTR MaLR -8 371 234 1 672 246 105 0 0 chrX 11494112 11494150 -155156146 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 1 672 379 361 33 58 chrX 11494151 11494392 -155155904 - L2a LINE L2 -5 3421 3187 1 672 288 324 135 50 chrX 11494534 11494794 -155155502 - L2a LINE L2 -543 2876 2595 1 672 803 238 31 12 chrX 11494794 11494956 -155155340 + RSINE1 SINE B4 1 165 0 1 672 347 367 65 33 chrX 11495048 11495293 -155155003 - L2a LINE L2 -941 2478 2226 1 672 696 189 0 8 chrX 11496883 11497006 -155153290 + B1_Mur1 SINE Alu 7 128 -21 1 672 369 0 0 0 chrX 11497722 11497763 -155152533 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 672 229 333 32 0 chrX 11498415 11498478 -155151818 + tRNA-Ala-GCY_ tRNA tRNA 2 66 -9 1 672 977 238 9 5 chrX 11498655 11498866 -155151430 + ID_B1 SINE B4 13 224 0 1 672 264 91 0 0 chrX 11498887 11498931 -155151365 + (TCTG)n Simple_repeat Simple_repeat 3 46 0 1 672 624 294 88 19 chrX 11498973 11499178 -155151118 - B4A SINE B4 -72 220 2 1 672 282 56 0 0 chrX 11499184 11499220 -155151076 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 1 672 705 184 16 0 chrX 11499408 11499533 -155150763 + B3A SINE B2 1 127 -71 1 672 444 37 0 0 chrX 11499543 11499597 -155150699 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 672 301 333 34 59 chrX 11499741 11499755 -155150541 + MT2B LTR ERVL 151 161 -440 1 672 459 293 86 0 chrX 11499755 11499871 -155150425 + B1_Mm SINE Alu 1 126 -21 1 672 430 278 76 25 chrX 11499882 11500000 -155150296 + RSINE1 SINE B4 2 125 -40 1 672 246 125 0 0 chrX 11500052 11500100 -155150196 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 672 781 284 85 15 chrX 11500275 11500475 -155149821 - ID_B1 SINE B4 -2 222 9 2 672 214 336 32 57 chrX 11500644 11500767 -155149529 + MIR SINE MIR 115 234 -28 3 672 206 195 24 0 chrX 11500938 11500979 -155149317 - MIR SINE MIR -110 152 111 4 672 696 195 257 6 chrX 11501034 11501209 -155149087 - ID_B1 SINE B4 -5 219 1 5 672 294 50 0 0 chrX 11502320 11502360 -155147936 + (TC)n Simple_repeat Simple_repeat 2 41 0 6 672 324 0 0 0 chrX 11502361 11502397 -155147899 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 672 263 274 0 31 chrX 11502556 11502620 -155147676 + ID_B1 SINE B4 86 147 -77 8 672 216 0 0 0 chrX 11502769 11502793 -155147503 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 9 672 405 280 242 48 chrX 11502806 11502971 -155147325 + B3A SINE B2 2 198 0 1 672 182 330 143 27 chrX 11503029 11503141 -155147155 + MIRc SINE MIR 34 158 -110 1 672 493 263 43 9 chrX 11503226 11503341 -155146955 + B1F SINE Alu 18 136 -13 1 672 874 184 0 0 chrX 11503342 11503478 -155146818 + B1_Mur3 SINE Alu 1 136 -13 1 672 189 0 0 0 chrX 11503478 11503499 -155146797 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 1 672 251 269 15 15 chrX 11503518 11503586 -155146710 + ID4 SINE ID 2 69 -14 1 672 649 234 0 74 chrX 11503623 11503798 -155146498 + RSINE1 SINE B4 4 165 0 1 672 23 54 0 0 chrX 11503798 11503835 -155146461 + AT_rich Low_complexity Low_complexity 1 37 0 1 672 294 222 25 15 chrX 11504660 11504739 -155145557 + PB1D10 SINE Alu 22 105 -44 1 672 412 242 81 0 chrX 11504930 11505029 -155145267 + PB1D7 SINE Alu 1 107 -13 1 672 381 330 212 24 chrX 11505337 11505794 -155144502 - L1MC4a LINE L1 -1957 5925 5383 2 672 977 262 10 50 chrX 11505942 11506239 -155144057 - B4A SINE B4 -7 285 1 2 672 379 217 25 24 chrX 11507384 11507495 -155142801 + PB1D9 SINE Alu 38 149 0 2 672 663 251 66 56 chrX 11507539 11507737 -155142559 + RMER30 DNA MER1_type 2 201 -1 2 672 226 162 0 0 chrX 11508474 11508511 -155141785 + PB1D9 SINE Alu 79 115 -5 2 672 228 275 196 35 chrX 11508562 11508705 -155141591 + MLT1G3 LTR MaLR 324 489 -106 2 672 191 315 0 0 chrX 11508893 11508947 -155141349 - L2 LINE L2 -620 2799 2746 2 672 470 183 9 0 chrX 11508956 11509071 -155141225 + GA-rich Low_complexity Low_complexity 2 117 0 2 672 263 300 0 81 chrX 11509483 11509570 -155140726 + ID4_ SINE ID 1 80 -3 2 672 22 35 0 0 chrX 11509570 11509599 -155140697 + AT_rich Low_complexity Low_complexity 1 29 0 2 672 742 185 30 30 chrX 11509599 11509733 -155140563 - B1_Mur2 SINE Alu -15 134 1 3 672 531 310 4 98 chrX 11509879 11509977 -155140319 + ID_B1 SINE B4 9 212 -12 3 672 849 150 0 15 chrX 11509977 11510104 -155140192 + B1_Mus2 SINE Alu 9 135 -12 3 672 459 0 0 0 chrX 11510104 11510155 -155140141 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 672 244 143 0 35 chrX 11510183 11510241 -155140055 + GA-rich Low_complexity Low_complexity 2 57 0 3 672 6411 41 5 3 chrX 11510451 11511216 -155139080 + L1Md_F3 LINE L1 5804 6570 -14 3 672 315 303 30 0 chrX 11511239 11511338 -155138958 + MLT1J LTR MaLR 92 193 -319 3 672 361 319 168 26 chrX 11511350 11511540 -155138756 + MIR SINE MIR 18 234 -28 3 672 316 289 28 28 chrX 11511583 11511690 -155138606 + MLT1J LTR MaLR 206 312 -200 3 672 601 200 32 24 chrX 11511862 11511874 -155138422 + B1F2 SINE Alu 5 16 -133 3 672 441 0 0 0 chrX 11511874 11511923 -155138373 + (GGAA)n Simple_repeat Simple_repeat 1 49 0 3 672 664 162 38 1 chrX 11511923 11512033 -155138263 + B1_Mur1 SINE Alu 17 128 -21 3 672 387 290 143 15 chrX 11512187 11512320 -155137976 - B4A SINE B4 -140 152 3 4 672 1076 230 15 0 chrX 11512338 11512542 -155137754 - ID_B1 SINE B4 -17 207 1 4 672 1413 58 2 0 chrX 11513266 11513861 -155136435 + (TGG)n Simple_repeat Simple_repeat 1 596 0 4 672 431 296 51 38 chrX 11513895 11514053 -155136243 - ID_B1 SINE B4 -6 218 59 4 672 461 297 27 0 chrX 11514057 11514168 -155136128 + PB1 SINE Alu 10 123 -4 4 672 192 77 0 0 chrX 11514372 11514398 -155135898 + (T)n Simple_repeat Simple_repeat 1 26 0 4 672 1207 68 0 0 chrX 11514398 11514545 -155135751 - B1_Mus2 SINE Alu 0 147 1 4 672 589 221 342 7 chrX 11514579 11514734 -155135562 + ID_B1 SINE B4 1 207 -17 4 672 2423 140 19 3 chrX 11514738 11515117 -155135179 - ORR1B1 LTR MaLR -9 385 1 4 672 347 262 55 137 chrX 11515600 11515746 -155134550 + ID_B1 SINE B4 84 217 -7 4 672 225 344 0 30 chrX 11516109 11516175 -155134121 + ID4_ SINE ID 7 70 -13 5 672 489 214 0 33 chrX 11516707 11516799 -155133497 - PB1D9 SINE Alu -23 97 9 5 672 522 0 0 0 chrX 11516836 11516894 -155133402 + (GA)n Simple_repeat Simple_repeat 1 58 0 5 672 526 292 7 52 chrX 11516896 11517051 -155133245 + B3A SINE B2 51 198 0 5 672 255 61 0 0 chrX 11517105 11517138 -155133158 + (CACCC)n Simple_repeat Simple_repeat 4 36 0 5 672 363 136 0 0 chrX 11517190 11517249 -155133047 + (GGGA)n Simple_repeat Simple_repeat 4 62 0 5 672 1047 123 0 0 chrX 11517249 11517412 -155132884 + (GAAA)n Simple_repeat Simple_repeat 1 163 0 5 672 359 329 22 75 chrX 11517497 11517724 -155132572 - MLT1K LTR MaLR -200 395 181 5 672 272 19 75 19 chrX 11517803 11517856 -155132440 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 5 672 636 269 15 0 chrX 11517856 11517990 -155132306 - B1F SINE Alu -13 136 1 5 672 198 234 106 30 chrX 11518069 11518135 -155132161 - MIRc SINE MIR -162 106 36 6 672 287 314 22 22 chrX 11518591 11518728 -155131568 - MLT1F1 LTR MaLR -79 490 354 6 672 715 181 118 0 chrX 11519249 11519376 -155130920 + B3 SINE B2 1 142 -74 6 672 387 0 0 0 chrX 11520139 11520182 -155130114 + (GA)n Simple_repeat Simple_repeat 1 43 0 6 672 185 357 101 23 chrX 11520908 11521037 -155129259 + MIRc SINE MIR 22 160 -48 6 672 241 342 0 0 chrX 11521041 11521117 -155129179 - B3 SINE B2 -131 85 10 6 672 465 66 0 0 chrX 11521153 11521214 -155129082 + (TGGA)n Simple_repeat Simple_repeat 4 64 0 6 672 231 322 188 32 chrX 11521788 11521942 -155128354 - L2c LINE L2 -1 3386 3197 6 672 636 253 7 7 chrX 11522301 11522448 -155127848 - B1F SINE Alu -1 148 2 6 672 589 308 72 7 chrX 11522477 11522704 -155127592 + LTR33A LTR ERVL 9 260 -271 6 672 384 289 15 59 chrX 11523661 11523797 -155126499 + RSINE1 SINE B4 3 132 -33 7 672 234 0 0 0 chrX 11523849 11523875 -155126421 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 7 672 273 339 55 8 chrX 11523902 11524030 -155126266 - L2a LINE L2 -52 3374 3241 7 672 380 136 0 36 chrX 11524031 11524115 -155126181 + (ATGGTG)n Simple_repeat Simple_repeat 3 83 0 7 672 234 293 50 25 chrX 11524190 11524309 -155125987 - L2a LINE L2 -472 2947 2826 7 672 820 271 34 5 chrX 11525118 11525322 -155124974 + ID_B1 SINE B4 3 212 -12 7 672 415 203 248 57 chrX 11525333 11525443 -155124853 - B3 SINE B2 -47 169 30 7 672 1237 179 249 13 chrX 11525443 11525549 -155124747 + ORR1D1 LTR MaLR 3 162 -212 7 672 306 0 0 0 chrX 11525549 11525583 -155124713 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 672 1237 179 249 13 chrX 11525583 11525777 -155124519 + ORR1D1 LTR MaLR 163 374 0 7 672 415 203 248 57 chrX 11525777 11525807 -155124489 - B3 SINE B2 -187 29 2 7 672 248 309 0 29 chrX 11525829 11525899 -155124397 + polypurine Low_complexity Low_complexity 4 71 0 7 672 235 242 0 16 chrX 11526975 11527008 -155123288 + A-rich Low_complexity Low_complexity 1 33 0 7 672 506 324 35 0 chrX 11527008 11527150 -155123146 + RSINE1 SINE B4 2 148 -17 8 672 235 242 0 16 chrX 11527150 11527179 -155123117 + A-rich Low_complexity Low_complexity 34 62 0 8 672 790 217 0 20 chrX 11527185 11527331 -155122965 - B1_Mur3 SINE Alu -5 144 2 8 672 839 45 0 18 chrX 11527334 11527447 -155122849 + (GAA)n Simple_repeat Simple_repeat 1 111 0 8 672 324 302 56 34 chrX 11527456 11527545 -155122751 + B4A SINE B4 1 91 -201 8 672 265 382 32 16 chrX 11527540 11527665 -155122631 + RSINE1 SINE B4 38 164 -1 8 672 515 16 16 0 chrX 11527683 11527747 -155122549 + (GA)n Simple_repeat Simple_repeat 1 65 0 8 672 493 294 142 66 chrX 11527845 11528177 -155122119 - ORR1E LTR MaLR 0 359 3 8 672 4266 167 100 50 chrX 11528355 11529204 -155121092 + RMER19B LTR ERVK 1 892 -10 8 672 483 292 5 54 chrX 11529208 11529374 -155120922 + ID_B1 SINE B4 1 152 -140 8 672 669 251 239 49 chrX 11529430 11529694 -155120602 - MLT1B LTR MaLR -76 314 1 9 672 677 250 7 13 chrX 11529746 11529896 -155120400 + B1F1 SINE Alu 1 149 0 9 672 249 409 33 28 chrX 11530008 11530189 -155120107 + MIRb SINE MIR 24 205 -63 9 672 441 340 65 49 chrX 11530214 11530461 -155119835 - MLT1J LTR MaLR -32 480 230 9 672 219 357 0 54 chrX 11530532 11530562 -155119734 + ID4_ SINE ID 12 81 -2 9 672 226 273 0 0 chrX 11530562 11530606 -155119690 + ID SINE ID 39 82 -142 9 672 241 266 31 0 chrX 11530647 11530711 -155119585 - MLT1J LTR MaLR -333 179 114 9 672 225 258 43 43 chrX 11531245 11531314 -155118982 - ID4 SINE ID -13 70 2 9 672 671 303 19 6 chrX 11531379 11531535 -155118761 - RSINE1 SINE B4 -7 158 1 9 672 205 171 0 0 chrX 11531539 11531574 -155118722 + (TTGG)n Simple_repeat Simple_repeat 1 35 0 9 672 350 200 0 15 chrX 11531575 11531641 -155118655 - B1F SINE Alu -7 142 78 9 672 220 273 34 68 chrX 11531672 11531731 -155118565 + ID4_ SINE ID 4 60 -23 1 672 219 297 115 51 chrX 11531731 11531750 -155118546 + ID SINE ID 4 86 -138 1 672 240 314 119 64 chrX 11533531 11533665 -155116631 + MamGypLTR1b LTR Gypsy 136 272 -510 1 672 233 0 0 59 chrX 11533665 11533699 -155116597 + (CAGAGA)n Simple_repeat Simple_repeat 4 35 0 1 672 240 314 119 64 chrX 11533699 11533782 -155116514 + MamGypLTR1b LTR Gypsy 273 364 -418 1 672 255 259 22 66 chrX 11533812 11533903 -155116393 - PB1D10 SINE Alu 0 117 31 1 673 555 172 25 17 chrX 11534481 11534599 -155115697 - MER103 DNA DNA -46 120 2 1 673 767 294 11 0 chrX 11534633 11534817 -155115479 - B3A SINE B2 -11 187 2 1 673 399 225 0 36 chrX 11535005 11535088 -155115208 + RSINE1 SINE B4 3 82 -83 1 673 22 35 0 0 chrX 11535163 11535192 -155115104 + AT_rich Low_complexity Low_complexity 1 29 0 1 673 273 29 0 0 chrX 11535255 11535289 -155115007 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 1 673 252 0 0 0 chrX 11536625 11536653 -155113643 + (A)n Simple_repeat Simple_repeat 1 28 0 1 673 420 272 121 40 chrX 11537606 11537805 -155112491 + B3 SINE B2 2 216 0 1 673 894 68 0 0 chrX 11538316 11538434 -155111862 + (TCC)n Simple_repeat Simple_repeat 2 119 0 1 673 765 169 86 29 chrX 11539836 11539976 -155110320 - B1_Mur4 SINE Alu -2 148 1 1 673 535 208 47 0 chrX 11539985 11540091 -155110205 - ID_B1 SINE B4 -9 215 105 1 673 364 350 0 8 chrX 11540158 11540276 -155110020 - B1F SINE Alu -9 140 24 1 673 359 296 25 33 chrX 11540406 11540537 -155109759 - PB1D9 SINE Alu -8 141 15 1 673 729 228 51 23 chrX 11540870 11541045 -155109251 + MTC LTR MaLR 1 180 -199 1 673 578 184 0 39 chrX 11541079 11541181 -155109115 + B1_Mur2 SINE Alu 46 143 -6 1 673 218 105 26 0 chrX 11541181 11541219 -155109077 + (GGGAA)n Simple_repeat Simple_repeat 3 41 0 1 673 544 197 40 32 chrX 11541233 11541359 -155108937 + MTC LTR MaLR 196 322 -57 1 673 224 137 0 19 chrX 11541893 11541945 -155108351 + CT-rich Low_complexity Low_complexity 2 52 0 1 673 222 250 29 0 chrX 11541945 11542013 -155108283 + (TATG)n Simple_repeat Simple_repeat 1 70 0 1 673 414 188 8 3 chrX 11542114 11542198 -155108098 + MTC LTR MaLR 310 410 -11 1 673 6470 148 63 43 chrX 11542203 11543436 -155106860 + MTC-int LTR MaLR 1 1258 0 1 673 2311 148 81 0 chrX 11543438 11543823 -155106473 + MTC LTR MaLR 3 418 -3 1 673 713 242 34 68 chrX 11543990 11544167 -155106129 - B3A SINE B2 -27 171 1 1 673 378 0 0 0 chrX 11544199 11544241 -155106055 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 673 696 176 106 8 chrX 11544297 11544429 -155105867 - B1_Mus2 SINE Alu 0 147 3 1 673 703 194 23 0 chrX 11544553 11544682 -155105614 + B1_Mus1 SINE Alu 1 132 -16 1 673 438 20 0 0 chrX 11544682 11544733 -155105563 + (GA)n Simple_repeat Simple_repeat 1 51 0 1 673 940 79 7 7 chrX 11544750 11544890 -155105406 + (GAAAA)n Simple_repeat Simple_repeat 4 143 0 1 673 475 239 169 0 chrX 11544894 11545036 -155105260 + ID_B1 SINE B4 2 167 -57 1 673 369 0 0 0 chrX 11546191 11546232 -155104064 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 673 1047 55 0 65 chrX 11546287 11546441 -155103855 + B1_Mm SINE Alu 1 144 -3 1 673 343 262 23 55 chrX 11546466 11546581 -155103715 + B1_Mur1 SINE Alu 3 147 -2 1 673 23 0 0 0 chrX 11546587 11546610 -155103686 + AT_rich Low_complexity Low_complexity 1 23 0 1 673 1023 105 0 0 chrX 11546648 11546781 -155103515 + B1_Mus2 SINE Alu 1 133 -14 1 673 516 72 0 0 chrX 11546781 11546850 -155103446 + (TAAA)n Simple_repeat Simple_repeat 2 70 0 1 673 301 214 93 93 chrX 11546941 11547049 -155103247 + L1ME1 LINE L1 5917 6024 -155 1 673 267 108 0 0 chrX 11547120 11547157 -155103139 + B3A SINE B2 5 41 -157 1 673 8800 194 48 9 chrX 11547202 11548987 -155101309 + Lx6 LINE L1 5587 7441 -19 1 673 2487 149 45 2 chrX 11548983 11549407 -155100889 - RMER1A Other Other -4 1026 585 1 673 634 233 16 189 chrX 11549410 11549595 -155100701 + B3A SINE B2 41 193 -2 1 673 861 279 91 33 chrX 11549674 11549948 -155100348 + B4A SINE B4 1 290 -2 1 673 778 142 134 0 chrX 11549976 11550103 -155100193 - B1_Mus1 SINE Alu -3 145 2 1 673 294 106 0 0 chrX 11550909 11550956 -155099340 + (GGTTG)n Simple_repeat Simple_repeat 2 48 0 1 673 216 0 0 0 chrX 11551412 11551436 -155098860 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 673 462 114 0 0 chrX 11551461 11551531 -155098765 + (CGTG)n Simple_repeat Simple_repeat 1 70 0 1 673 497 250 110 101 chrX 11551569 11551778 -155098518 - B4 SINE B4 -25 267 57 1 673 425 245 32 0 chrX 11551806 11551900 -155098396 - PB1D10 SINE Alu -20 97 1 1 673 225 267 31 122 chrX 11551820 11551918 -155098378 - MT2B LTR ERVL -360 241 153 1 673 942 58 0 0 chrX 11552280 11552401 -155097895 + (CA)n Simple_repeat Simple_repeat 1 121 0 1 673 281 308 23 23 chrX 11552430 11552606 -155097690 + (CATA)n Simple_repeat Simple_repeat 3 178 0 1 673 198 103 0 0 chrX 11552630 11552659 -155097637 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 673 555 326 0 27 chrX 11552666 11552814 -155097482 + ID_B1 SINE B4 81 224 0 1 673 688 164 90 0 chrX 11552823 11552945 -155097351 + B1_Mur2 SINE Alu 10 142 -7 1 673 28 48 0 0 chrX 11552946 11552988 -155097308 + AT_rich Low_complexity Low_complexity 1 42 0 1 673 385 329 103 18 chrX 11553029 11553252 -155097044 - MER112 DNA MER1_type -19 242 1 1 673 251 157 19 19 chrX 11553989 11554041 -155096255 - MLT1A1 LTR MaLR -11 397 346 1 673 336 294 67 26 chrX 11554160 11554289 -155096007 - MLT1A1 LTR MaLR -248 126 1 1 673 475 269 38 23 chrX 11554348 11554481 -155095815 + B1F1 SINE Alu 5 139 -10 1 673 313 295 380 36 chrX 11554531 11554914 -155095382 - MLT1H1 LTR MaLR 0 579 65 1 673 542 248 0 0 chrX 11554987 11555088 -155095208 - RSINE1 SINE B4 -62 103 3 1 673 222 176 0 0 chrX 11555136 11555187 -155095109 + (TCTCTG)n Simple_repeat Simple_repeat 4 54 0 1 673 1015 272 42 30 chrX 11555215 11555477 -155094819 - B4A SINE B4 -1 291 27 1 673 623 244 84 12 chrX 11555490 11555656 -155094640 - MLT1C LTR MaLR -289 178 1 1 673 284 325 157 17 chrX 11555718 11555890 -155094406 - LTR16C LTR ERVL -112 377 182 1 673 448 295 146 67 chrX 11556728 11557365 -155092931 - L2a LINE L2 -2 3373 2718 1 673 240 180 62 47 chrX 11557447 11557511 -155092785 + ID4_ SINE ID 3 67 -16 1 673 534 173 7 15 chrX 11557521 11557656 -155092640 + GA-rich Low_complexity Low_complexity 2 135 0 1 673 726 222 69 0 chrX 11557757 11557901 -155092395 + B3A SINE B2 1 154 -44 1 673 354 98 0 0 chrX 11557902 11557953 -155092343 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 673 1097 298 3 63 chrX 11557992 11558215 -155092081 + B4A SINE B4 10 227 -65 1 673 818 201 45 7 chrX 11558215 11558370 -155091926 + RSINE1 SINE B4 4 164 -1 1 673 1097 298 3 63 chrX 11558370 11558447 -155091849 + B4A SINE B4 228 292 0 1 673 248 230 34 11 chrX 11559000 11559073 -155091223 + T-rich Low_complexity Low_complexity 16 91 0 1 673 925 145 20 14 chrX 11559073 11559220 -155091076 - B1_Mus1 SINE Alu 0 148 1 1 673 248 230 34 11 chrX 11559220 11559234 -155091062 + T-rich Low_complexity Low_complexity 2 15 0 1 673 293 287 46 73 chrX 11559286 11559372 -155090924 + B3A SINE B2 84 172 -26 1 673 1498 195 89 47 chrX 11559372 11559754 -155090542 + RMER10B LTR ERVL 1 398 0 1 673 293 287 46 73 chrX 11559754 11559776 -155090520 + B3A SINE B2 173 189 -9 1 673 834 142 14 29 chrX 11559803 11559941 -155090355 - B1_Mus2 SINE Alu -6 141 6 1 673 513 125 0 0 chrX 11559956 11560044 -155090252 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 1 673 560 149 0 69 chrX 11560071 11560172 -155090124 + B1_Mus2 SINE Alu 47 140 -7 1 673 423 268 84 59 chrX 11560285 11560556 -155089740 - MLT1E2 LTR MaLR -7 646 378 1 673 244 275 0 235 chrX 11560691 11560733 -155089563 + PB1D10 SINE Alu 13 49 -68 1 673 1187 64 0 0 chrX 11560733 11560874 -155089422 + B1_Mm SINE Alu 1 141 -6 1 673 639 0 0 0 chrX 11560876 11560947 -155089349 + (GAA)n Simple_repeat Simple_repeat 3 73 0 1 673 244 275 0 235 chrX 11560947 11561020 -155089276 + PB1D10 SINE Alu 50 103 -14 1 673 200 34 0 33 chrX 11561020 11561050 -155089246 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 673 979 133 0 0 chrX 11561050 11561185 -155089111 - B1_Mus1 SINE Alu -10 138 4 1 673 488 260 29 0 chrX 11561276 11561380 -155088916 + PB1D10 SINE Alu 10 116 -1 1 673 32 43 0 0 chrX 11561508 11561554 -155088742 + AT_rich Low_complexity Low_complexity 1 46 0 1 673 26 0 0 0 chrX 11561861 11561887 -155088409 + AT_rich Low_complexity Low_complexity 1 26 0 1 673 470 318 0 53 chrX 11561901 11562034 -155088262 + ID_B1 SINE B4 84 209 -15 1 673 211 144 26 43 chrX 11562039 11562155 -155088141 + (TA)n Simple_repeat Simple_repeat 2 115 0 1 673 496 230 120 3 chrX 11562164 11562326 -155087970 + L1MA7 LINE L1 5607 5787 -504 1 673 989 224 71 0 chrX 11562326 11562522 -155087774 + B3 SINE B2 2 211 -5 1 673 465 248 97 109 chrX 11562522 11562699 -155087597 + L1MA7 LINE L1 5788 5942 -349 1 673 250 311 238 0 chrX 11562899 11563021 -155087275 - MLT1E LTR MaLR -502 151 1 1 673 236 309 102 9 chrX 11563266 11563374 -155086922 + LTR16C LTR ERVL 291 408 -81 1 673 636 200 77 0 chrX 11563546 11563676 -155086620 + B1_Mur3 SINE Alu 5 144 -5 1 673 329 198 12 0 chrX 11563677 11563758 -155086538 + GA-rich Low_complexity Low_complexity 3 84 0 1 673 492 72 0 0 chrX 11563811 11563880 -155086416 + (CA)n Simple_repeat Simple_repeat 1 69 0 1 673 250 341 0 21 chrX 11564427 11564535 -155085761 + B4A SINE B4 76 175 -49 1 673 192 77 0 0 chrX 11564558 11564584 -155085712 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 673 344 255 76 29 chrX 11564595 11564700 -155085596 + PB1D7 SINE Alu 11 120 0 1 673 346 255 41 34 chrX 11565212 11565358 -155084938 + HAL1 LINE L1 1116 1262 -1245 2 673 619 239 0 181 chrX 11565934 11566133 -155084163 + RSINE1 SINE B4 3 165 0 2 673 295 283 141 0 chrX 11566148 11566240 -155084056 - PB1D10 SINE Alu -11 106 2 2 673 531 164 0 0 chrX 11566241 11566345 -155083951 + (TG)n Simple_repeat Simple_repeat 1 104 0 2 673 433 229 105 0 chrX 11567057 11567167 -155083129 - PB1D7 SINE Alu -7 120 1 2 673 1238 49 0 0 chrX 11567181 11567324 -155082972 - B1_Mus2 SINE Alu 0 147 5 2 673 23 33 0 0 chrX 11567331 11567361 -155082935 + AT_rich Low_complexity Low_complexity 1 30 0 2 673 334 239 67 11 chrX 11568319 11568408 -155081888 - PB1D10 SINE Alu -12 105 12 2 673 423 200 191 48 chrX 11568547 11568673 -155081623 + B1F SINE Alu 1 144 -5 2 673 552 261 88 0 chrX 11568708 11568838 -155081458 + ID_B1 SINE B4 8 155 -137 2 673 247 234 134 52 chrX 11568852 11568988 -155081308 - MER63A DNA AcHobo -43 167 20 2 673 207 0 0 0 chrX 11569110 11569133 -155081163 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2 673 456 216 58 10 chrX 11569133 11569236 -155081060 - PB1D9 SINE Alu -11 109 2 2 673 790 132 94 14 chrX 11569260 11569398 -155080898 + B1_Mur4 SINE Alu 2 150 0 2 673 215 266 45 30 chrX 11569525 11569591 -155080705 + ID SINE ID 3 69 -155 2 673 732 190 7 34 chrX 11569643 11569790 -155080506 + ID_B1 SINE B4 82 224 0 2 673 245 335 14 21 chrX 11569792 11569923 -155080373 - MIR SINE MIR -67 201 61 2 673 427 222 62 86 chrX 11569953 11569983 -155080313 + RSINE1 SINE B4 13 42 -123 2 673 2551 86 0 3 chrX 11569983 11570311 -155079985 - ORR1A2 LTR MaLR 0 327 1 2 673 427 222 62 86 chrX 11570311 11570408 -155079888 + RSINE1 SINE B4 43 137 -28 2 673 287 266 0 0 chrX 11570405 11570469 -155079827 + ID_B1 SINE B4 158 221 -3 2 673 734 269 26 0 chrX 11570553 11570709 -155079587 + RSINE1 SINE B4 2 161 -4 2 673 234 0 0 0 chrX 11570718 11570744 -155079552 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2 673 389 367 36 55 chrX 11570787 11571006 -155079290 - MLT1J LTR MaLR -92 420 206 2 673 763 279 17 93 chrX 11571519 11571819 -155078477 + B4 SINE B4 4 280 -12 2 673 470 96 0 14 chrX 11571879 11571922 -155078374 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 2 673 1037 141 0 6 chrX 11571922 11572101 -155078195 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 2 673 470 96 0 14 chrX 11572101 11572131 -155078165 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 2 673 180 0 0 0 chrX 11572131 11572151 -155078145 + (CAAG)n Simple_repeat Simple_repeat 2 21 0 2 673 383 221 93 37 chrX 11572386 11572494 -155077802 - MLT1K LTR MaLR -36 559 446 2 673 23 0 0 0 chrX 11572953 11572976 -155077320 + GC_rich Low_complexity Low_complexity 1 23 0 2 673 334 357 28 0 chrX 11573166 11573241 -155077055 + B1F SINE Alu 3 80 -69 2 673 742 197 15 0 chrX 11573241 11573378 -155076918 + B1_Mur2 SINE Alu 1 139 -10 2 673 334 357 28 0 chrX 11573378 11573445 -155076851 + B1F SINE Alu 81 148 -1 2 673 351 0 0 0 chrX 11574273 11574312 -155075984 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 2 673 459 207 44 119 chrX 11574312 11574328 -155075968 + ID_B1 SINE B4 64 203 -21 2 673 777 137 0 90 chrX 11574328 11574462 -155075834 + B1_Mur4 SINE Alu 3 125 -25 2 673 261 0 0 0 chrX 11574462 11574491 -155075805 + (CCCCCA)n Simple_repeat Simple_repeat 3 31 0 2 673 180 0 0 0 chrX 11575942 11575962 -155074334 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2 673 284 327 84 78 chrX 11576839 11577018 -155073278 + MIRb SINE MIR 51 230 -38 2 673 396 0 0 0 chrX 11578897 11578941 -155071355 + (GA)n Simple_repeat Simple_repeat 1 44 0 2 673 180 0 0 0 chrX 11579669 11579689 -155070607 + (TGGG)n Simple_repeat Simple_repeat 1 20 0 2 673 306 0 0 0 chrX 11583866 11583900 -155066396 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 673 23 54 0 0 chrX 11584378 11584415 -155065881 + GC_rich Low_complexity Low_complexity 1 37 0 2 673 21 36 0 0 chrX 11585017 11585045 -155065251 + AT_rich Low_complexity Low_complexity 1 28 0 2 673 374 57 0 19 chrX 11585951 11586005 -155064291 + (TAG)n Simple_repeat Simple_repeat 2 54 0 2 673 487 225 63 52 chrX 11586264 11586455 -155063841 - MLT1G1 LTR MaLR -199 349 136 2 673 308 296 92 0 chrX 11586582 11586680 -155063616 + PB1D10 SINE Alu 1 107 -10 2 673 306 0 0 0 chrX 11586930 11586964 -155063332 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 673 393 22 0 0 chrX 11586989 11587035 -155063261 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 673 352 323 46 0 chrX 11587058 11587188 -155063108 - MLT1G1 LTR MaLR -455 136 1 2 673 484 282 84 0 chrX 11587718 11587849 -155062447 + ID_B1 SINE B4 81 222 -2 2 673 387 230 68 5 chrX 11587999 11588090 -155062206 + RSINE1 SINE B4 1 96 -69 2 673 718 244 76 20 chrX 11588179 11588376 -155061920 + MTD LTR MaLR 212 419 0 2 673 329 247 12 12 chrX 11588376 11588462 -155061834 - B1F SINE Alu -59 90 5 2 673 24 0 0 0 chrX 11588813 11588837 -155061459 + AT_rich Low_complexity Low_complexity 1 24 0 2 673 1142 60 0 0 chrX 11588962 11589096 -155061200 - B1_Mm SINE Alu -12 135 2 2 673 1819 239 69 45 chrX 11589152 11589617 -155060679 + RMER19C LTR ERVK 126 601 -10 2 673 23 0 0 0 chrX 11589705 11589728 -155060568 + AT_rich Low_complexity Low_complexity 1 23 0 2 673 221 179 26 0 chrX 11589748 11589787 -155060509 - ID4_ SINE ID -43 40 1 2 673 228 35 0 0 chrX 11589833 11589862 -155060434 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 673 855 148 0 0 chrX 11589862 11589990 -155060306 - B1_Mur4 SINE Alu -9 141 14 2 673 299 172 88 8 chrX 11589998 11590097 -155060199 - B3 SINE B2 -37 179 7 2 673 946 295 10 47 chrX 11590114 11590159 -155060137 - B4A SINE B4 0 292 256 2 673 225 0 0 0 chrX 11590159 11590184 -155060112 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 673 946 295 10 47 chrX 11590184 11590437 -155059859 - B4A SINE B4 -37 255 5 2 673 287 189 13 127 chrX 11590579 11590658 -155059638 - ID4_ SINE ID -13 70 1 2 673 897 280 87 12 chrX 11590890 11591358 -155058938 + MLT1F1 LTR MaLR 9 569 0 2 673 1014 112 0 0 chrX 11591441 11591601 -155058695 + (TTTC)n Simple_repeat Simple_repeat 2 161 0 2 673 790 157 66 15 chrX 11591601 11591737 -155058559 - B1_Mus2 SINE Alu -3 144 2 2 673 674 199 96 0 chrX 11591766 11591902 -155058394 - B1_Mur2 SINE Alu 0 149 1 2 673 448 276 62 16 chrX 11591910 11591925 -155058371 - RSINE1 SINE B4 -29 136 122 2 673 354 23 0 0 chrX 11591925 11591968 -155058328 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 673 448 276 62 16 chrX 11591968 11592081 -155058215 - RSINE1 SINE B4 -44 121 3 2 673 295 184 13 26 chrX 11592633 11592711 -155057585 + GA-rich Low_complexity Low_complexity 5 81 0 2 673 379 274 10 26 chrX 11592775 11592887 -155057409 + B4A SINE B4 135 242 -50 2 673 11305 108 20 64 chrX 11592888 11594840 -155055456 + ORR1A3-int LTR MaLR 1 1963 0 2 673 2267 98 0 16 chrX 11594840 11595163 -155055133 + ORR1A3 LTR MaLR 1 318 -8 2 673 2400 107 11 3 chrX 11595174 11595530 -155054766 - RLTR15 LTR ERVK 0 359 1 2 673 346 238 277 0 chrX 11595588 11595689 -155054607 + ID_B1 SINE B4 89 217 -7 2 673 227 356 34 34 chrX 11595590 11595709 -155054587 + B1_Mur4 SINE Alu 11 129 -21 2 673 868 141 35 7 chrX 11595952 11596095 -155054201 - B1_Mur4 SINE Alu -2 148 2 2 673 364 217 57 0 chrX 11596146 11596233 -155054063 + ID4_ SINE ID 7 99 -53 2 673 459 226 97 10 chrX 11596298 11596401 -155053895 + PB1D10 SINE Alu 1 112 -5 2 673 854 321 15 48 chrX 11596435 11596847 -155053449 + L1ME3A LINE L1 5707 6104 -69 2 673 186 43 0 0 chrX 11597043 11597066 -155053230 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 673 568 236 99 14 chrX 11597091 11597233 -155053063 - RSINE1 SINE B4 -9 156 3 2 673 256 333 87 9 chrX 11597245 11597360 -155052936 - ID_B1 SINE B4 -9 215 92 2 673 302 263 15 102 chrX 11597387 11597495 -155052801 - B1F1 SINE Alu -35 114 8 2 673 651 118 81 9 chrX 11597749 11597860 -155052436 + PB1D9 SINE Alu 1 119 -1 2 673 712 309 54 48 chrX 11598806 11599119 -155051177 + Charlie4a DNA MER1_type 5 319 -189 2 673 276 30 0 0 chrX 11599250 11599283 -155051013 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 673 311 301 121 40 chrX 11599308 11599457 -155050839 - HAL1-3A_ME LINE L1 -414 2444 2284 2 673 576 0 0 0 chrX 11599457 11599521 -155050775 + (TTC)n Simple_repeat Simple_repeat 2 65 0 2 673 3461 242 60 16 chrX 11599551 11600467 -155049829 - Lx8 LINE L1 -326 7147 6192 2 673 1309 103 0 0 chrX 11600522 11600697 -155049599 + B2_Mm2 SINE B2 2 176 -19 2 673 542 196 623 37 chrX 11600744 11601055 -155049241 + MERVL_2A-int LTR ERVL 264 757 -5004 2 673 306 0 0 0 chrX 11601056 11601090 -155049206 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 673 893 197 0 7 chrX 11601107 11601250 -155049046 - B1_Mur2 SINE Alu -7 142 1 2 673 656 214 14 28 chrX 11601258 11601402 -155048894 - B1F2 SINE Alu -5 144 3 2 673 708 138 0 0 chrX 11601448 11601564 -155048732 + (TC)n Simple_repeat Simple_repeat 1 116 0 2 673 384 22 0 0 chrX 11601567 11601612 -155048684 + (TTCC)n Simple_repeat Simple_repeat 3 47 0 2 673 198 103 0 0 chrX 11601773 11601802 -155048494 + (TCC)n Simple_repeat Simple_repeat 3 31 0 2 673 413 281 10 0 chrX 11601803 11601899 -155048397 - ID_B1 SINE B4 -78 146 50 2 673 555 244 43 0 chrX 11601908 11602023 -155048273 - PB1D7 SINE Alu 0 120 1 2 673 627 216 0 98 chrX 11602065 11602229 -155048067 + B1_Mur2 SINE Alu 2 149 0 2 673 306 269 41 41 chrX 11602467 11602564 -155047732 - PB1 SINE Alu -2 125 29 2 673 555 217 176 21 chrX 11603182 11603375 -155046921 - ID_B1 SINE B4 -1 223 1 3 673 615 221 16 0 chrX 11603538 11603660 -155046636 + B3A SINE B2 1 124 -74 3 673 267 281 129 29 chrX 11603660 11603677 -155046619 + B4A SINE B4 1 153 -139 3 673 569 297 0 7 chrX 11603726 11603865 -155046431 - B1F1 SINE Alu -3 146 9 3 673 414 281 135 43 chrX 11603947 11604088 -155046208 + ID_B1 SINE B4 71 224 0 3 673 522 215 25 140 chrX 11603967 11604124 -155046172 + B1F2 SINE Alu 10 148 -1 3 673 563 331 7 0 chrX 11604126 11604268 -155046028 + RSINE1 SINE B4 1 143 -22 3 673 26 0 0 0 chrX 11604329 11604355 -155045941 + AT_rich Low_complexity Low_complexity 1 26 0 3 673 238 70 0 140 chrX 11604367 11604417 -155045879 + PB1D9 SINE Alu 75 117 -3 3 673 572 270 14 14 chrX 11604517 11604656 -155045640 + B1F SINE Alu 1 139 -10 3 673 1046 226 0 19 chrX 11604899 11605115 -155045181 + B3 SINE B2 5 216 0 3 673 1215 88 0 0 chrX 11605123 11605293 -155045003 + (GGAGAA)n Simple_repeat Simple_repeat 6 175 0 3 673 359 188 0 0 chrX 11605314 11605378 -155044918 - B1_Mur3 SINE Alu -9 140 77 3 673 728 291 28 0 chrX 11605378 11605560 -155044736 + ID_B1 SINE B4 21 207 -17 3 673 3412 43 2 0 chrX 11605625 11606020 -155044276 + MTA_Mm LTR MaLR 1 396 0 3 673 544 329 127 34 chrX 11606023 11606401 -155043895 + MLT1G1 LTR MaLR 128 540 -39 3 673 754 308 71 23 chrX 11606408 11606843 -155043453 - L1MB7 LINE L1 -5 6179 5724 3 673 219 204 0 0 chrX 11606860 11606909 -155043387 + GA-rich Low_complexity Low_complexity 1 49 0 3 673 950 226 13 54 chrX 11606981 11607205 -155043091 - B3 SINE B2 -1 215 1 3 673 492 269 219 27 chrX 11607330 11607517 -155042779 - ID_B1 SINE B4 -1 223 1 3 673 245 223 37 130 chrX 11607536 11607644 -155042652 - B3A SINE B2 0 198 101 3 673 345 241 9 44 chrX 11607703 11607816 -155042480 - L1ME3B LINE L1 -278 5962 5854 3 673 314 309 90 35 chrX 11607943 11608144 -155042152 - LTR16B LTR ERVL -92 371 160 3 673 378 0 0 0 chrX 11608409 11608451 -155041845 + (TC)n Simple_repeat Simple_repeat 2 43 0 3 673 422 49 16 0 chrX 11608451 11608511 -155041785 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 673 668 268 121 0 chrX 11608513 11608670 -155041626 - B3 SINE B2 -40 176 1 3 673 527 96 12 0 chrX 11608787 11608870 -155041426 + (TCCC)n Simple_repeat Simple_repeat 2 85 0 3 673 626 190 107 0 chrX 11608870 11608991 -155041305 - B1_Mus2 SINE Alu -5 142 9 3 673 598 170 84 49 chrX 11609095 11609237 -155041059 - B1_Mus2 SINE Alu 0 147 1 3 673 334 327 24 71 chrX 11609278 11609446 -155040850 - L1MC4 LINE L1 -197 7798 7639 3 673 246 143 31 16 chrX 11609453 11609517 -155040779 + GA-rich Low_complexity Low_complexity 2 66 0 3 673 1213 99 0 0 chrX 11609538 11609699 -155040597 + B2_Mm2 SINE B2 1 161 -34 3 673 348 24 0 0 chrX 11609699 11609740 -155040556 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 3 673 445 154 0 0 chrX 11609742 11609807 -155040489 + polypurine Low_complexity Low_complexity 2 66 0 3 673 983 157 0 6 chrX 11609807 11609987 -155040309 + GA-rich Low_complexity Low_complexity 1 179 0 3 673 393 136 0 0 chrX 11610072 11610138 -155040158 + (TC)n Simple_repeat Simple_repeat 2 67 0 3 673 369 260 19 29 chrX 11610269 11610372 -155039924 - L1MC4 LINE L1 -1242 6800 6699 3 673 887 194 141 0 chrX 11610656 11610847 -155039449 + ID_B1 SINE B4 2 219 -5 3 673 672 48 0 0 chrX 11610873 11610957 -155039339 + (TA)n Simple_repeat Simple_repeat 1 84 0 3 673 785 312 134 37 chrX 11611159 11611645 -155038651 + MT2A LTR ERVL 1 533 0 3 673 838 156 59 0 chrX 11611872 11612007 -155038289 - B1_Mus1 SINE Alu -1 147 5 3 673 837 227 19 0 chrX 11612171 11612325 -155037971 - RSINE1 SINE B4 -6 159 3 3 673 346 250 104 19 chrX 11613450 11613556 -155036740 + PB1 SINE Alu 2 116 -4 3 673 309 267 13 0 chrX 11613557 11613632 -155036664 + ID4 SINE ID 6 81 -2 3 673 252 0 0 0 chrX 11613637 11613665 -155036631 + (GA)n Simple_repeat Simple_repeat 1 28 0 3 673 183 129 0 0 chrX 11614420 11614451 -155035845 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3 673 682 176 43 71 chrX 11615310 11615451 -155034845 - B1_Mur2 SINE Alu -12 137 1 3 673 186 71 0 0 chrX 11617208 11617236 -155033060 + (CCAA)n Simple_repeat Simple_repeat 2 29 0 3 673 215 365 0 20 chrX 11617357 11617455 -155032841 - PB1D10 SINE Alu -15 102 7 3 673 282 198 21 104 chrX 11617928 11618024 -155032272 + RLTR25B LTR ERVK 415 502 -526 3 673 633 128 16 49 chrX 11617948 11618071 -155032225 + B1_Mur4 SINE Alu 32 150 0 3 673 516 32 0 0 chrX 11618485 11618547 -155031749 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 673 485 294 0 8 chrX 11619053 11619173 -155031123 + PB1D7 SINE Alu 1 119 -1 3 673 459 233 114 50 chrX 11619447 11619587 -155030709 + B1F1 SINE Alu 1 149 0 3 673 1001 65 7 21 chrX 11623614 11623756 -155026540 + B1_Mus1 SINE Alu 1 140 -8 3 673 212 0 36 0 chrX 11623756 11623784 -155026512 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 673 347 286 236 8 chrX 11627365 11627492 -155022804 + RSINE1 SINE B4 2 157 -8 3 673 308 260 79 86 chrX 11630141 11630257 -155020039 + PB1D10 SINE Alu 5 117 0 3 673 227 192 27 14 chrX 11630262 11630336 -155019960 + A-rich Low_complexity Low_complexity 2 76 0 3 673 22 0 0 0 chrX 11630751 11630773 -155019523 + AT_rich Low_complexity Low_complexity 1 22 0 3 673 211 191 0 73 chrX 11632581 11632649 -155017647 + A-rich Low_complexity Low_complexity 3 65 0 3 673 279 71 0 0 chrX 11637130 11637172 -155013124 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 673 281 214 168 30 chrX 11642337 11642438 -155007858 - PB1D9 SINE Alu -1 119 5 3 673 193 293 40 0 chrX 11642832 11642907 -155007389 + MIRc SINE MIR 66 143 -125 3 673 222 37 0 0 chrX 11644577 11644604 -155005692 + (CCCCG)n Simple_repeat Simple_repeat 3 29 0 3 673 395 193 62 70 chrX 11649001 11649129 -155001167 - MIRb SINE MIR -92 176 50 3 673 578 82 12 0 chrX 11651503 11651588 -154998708 + (GA)n Simple_repeat Simple_repeat 1 86 0 3 673 1233 34 0 7 chrX 11652568 11652716 -154997580 - B1_Mm SINE Alu 0 147 1 3 673 27 29 0 0 chrX 11656888 11656922 -154993374 + GC_rich Low_complexity Low_complexity 1 34 0 3 673 186 43 0 0 chrX 11657244 11657267 -154993029 + (CGGGG)n Simple_repeat Simple_repeat 2 24 0 3 673 231 78 19 38 chrX 11657721 11657774 -154992522 + (TCCC)n Simple_repeat Simple_repeat 1 52 0 3 673 30 0 0 0 chrX 11657819 11657849 -154992447 + GC_rich Low_complexity Low_complexity 1 30 0 3 673 31 0 0 0 chrX 11658204 11658235 -154992061 + GC_rich Low_complexity Low_complexity 1 31 0 3 673 195 42 0 0 chrX 11661605 11661629 -154988667 + (GGGTG)n Simple_repeat Simple_repeat 2 25 0 3 673 207 0 0 0 chrX 11662881 11662904 -154987392 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 674 21 82 0 0 chrX 11665672 11665721 -154984575 + GC_rich Low_complexity Low_complexity 1 49 0 3 674 27 73 0 0 chrX 11668462 11668517 -154981779 + GC_rich Low_complexity Low_complexity 1 55 0 3 674 516 16 0 0 chrX 11668638 11668699 -154981597 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 674 21 36 0 0 chrX 11668893 11668921 -154981375 + GC_rich Low_complexity Low_complexity 1 28 0 3 674 360 0 0 0 chrX 11669563 11669603 -154980693 + (GA)n Simple_repeat Simple_repeat 2 41 0 3 674 1206 56 0 0 chrX 11670012 11670156 -154980140 - B1_Mm SINE Alu 0 147 4 3 674 288 0 0 0 chrX 11670323 11670355 -154979941 + (TTTTA)n Simple_repeat Simple_repeat 3 34 0 3 674 495 156 20 49 chrX 11670355 11670458 -154979838 - PB1D9 SINE Alu -11 116 10 3 674 260 261 31 102 chrX 11670380 11670478 -154979818 - B4 SINE B4 -123 169 79 3 674 213 39 0 0 chrX 11670720 11670746 -154979550 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 674 315 0 0 0 chrX 11670902 11670937 -154979359 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 674 393 247 12 0 chrX 11670942 11671027 -154979269 - PB1 SINE Alu -21 106 21 3 674 814 121 15 8 chrX 11671237 11671370 -154978926 - B1_Mur4 SINE Alu 0 150 17 3 674 191 161 32 97 chrX 11671818 11671880 -154978416 - MIR SINE MIR -201 61 4 3 674 320 89 0 0 chrX 11671904 11671949 -154978347 + U6 snRNA snRNA 1 45 -62 3 674 442 242 91 0 chrX 11672182 11672281 -154978015 + PB1D10 SINE Alu 3 110 -7 3 674 349 254 178 0 chrX 11672293 11672411 -154977885 + RSINE1 SINE B4 2 140 -25 3 674 479 248 33 0 chrX 11672439 11672560 -154977736 + B1F SINE Alu 24 148 -1 3 674 492 32 0 0 chrX 11672725 11672787 -154977509 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 674 339 229 233 17 chrX 11672793 11672913 -154977383 + B1F2 SINE Alu 2 147 -2 3 674 279 197 322 8 chrX 11672913 11673031 -154977265 + ID_B1 SINE B4 2 156 -68 3 674 704 146 0 0 chrX 11673032 11673142 -154977154 + B1_Mur3 SINE Alu 23 132 -17 3 674 373 250 57 0 chrX 11673178 11673266 -154977030 + ID_B1 SINE B4 120 212 -12 3 674 180 0 0 0 chrX 11673266 11673286 -154977010 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 3 674 249 234 105 53 chrX 11673298 11673393 -154976903 + B1_Mur1 SINE Alu 32 114 -6 3 674 282 308 74 34 chrX 11674054 11674202 -154976094 - MIRb SINE MIR -1 267 114 3 674 352 272 0 12 chrX 11674695 11674777 -154975519 + ID4 SINE ID 3 83 0 4 674 258 241 177 0 chrX 11674929 11675034 -154975262 - MIRc SINE MIR -15 253 114 4 674 342 0 0 0 chrX 11675279 11675317 -154974979 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 674 183 253 12 60 chrX 11675926 11676010 -154974286 - L4 LINE RTE -5 2024 1945 4 674 281 318 69 157 chrX 11676239 11676630 -154973666 - MLT1A1 LTR MaLR -13 395 31 4 674 381 38 75 0 chrX 11676630 11676710 -154973586 + (TG)n Simple_repeat Simple_repeat 1 86 0 4 674 281 318 69 157 chrX 11676710 11676751 -154973545 - MLT1A1 LTR MaLR -378 30 1 4 674 201 83 0 53 chrX 11676884 11676922 -154973374 + (TC)n Simple_repeat Simple_repeat 1 36 0 4 674 23 33 0 0 chrX 11677647 11677677 -154972619 + AT_rich Low_complexity Low_complexity 1 30 0 4 674 525 186 0 40 chrX 11677867 11677968 -154972328 + RSINE1 SINE B4 8 104 -61 4 674 407 248 149 37 chrX 11678031 11678165 -154972131 + B1F SINE Alu 1 149 0 4 674 968 159 0 7 chrX 11678517 11678796 -154971500 + CT-rich Low_complexity Low_complexity 1 276 0 4 674 235 369 48 0 chrX 11678931 11679015 -154971281 - B1F1 SINE Alu -61 88 1 4 674 1005 67 0 58 chrX 11679024 11679215 -154971081 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 674 970 82 89 0 chrX 11679219 11679354 -154970942 - B1_Mus1 SINE Alu 0 148 2 4 674 510 17 0 0 chrX 11679392 11679451 -154970845 + (TG)n Simple_repeat Simple_repeat 1 59 0 4 674 2905 62 5 0 chrX 11679456 11679845 -154970451 + MTB LTR MaLR 2 392 -8 4 674 297 0 0 0 chrX 11679848 11679881 -154970415 + (TC)n Simple_repeat Simple_repeat 2 34 0 4 674 288 0 0 0 chrX 11679881 11679912 -154970384 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 674 245 200 438 0 chrX 11679940 11680020 -154970276 - RSINE1 SINE B4 -41 124 10 4 674 288 319 88 15 chrX 11680024 11680161 -154970135 - B1_Mm SINE Alu 0 147 1 4 674 381 342 9 0 chrX 11680049 11680163 -154970133 - ID_B1 SINE B4 -31 193 79 4 674 183 338 14 0 chrX 11680338 11680412 -154969884 + L2 LINE L2 2718 2792 -627 4 674 491 283 101 20 chrX 11680683 11680831 -154969465 - RSINE1 SINE B4 -3 162 3 4 674 207 88 0 0 chrX 11681706 11681740 -154968556 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 674 281 270 160 49 chrX 11681765 11681849 -154968447 - ID_B1 SINE B4 -56 168 75 4 674 284 0 28 0 chrX 11681849 11681885 -154968411 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 674 281 270 160 49 chrX 11681885 11681944 -154968352 - ID SINE ID -150 74 10 4 674 225 225 26 66 chrX 11683596 11683609 -154966687 + ID_B1 SINE B4 143 215 -9 4 674 383 143 32 0 chrX 11683609 11683672 -154966624 + B1_Mur4 SINE Alu 77 141 -9 4 674 213 132 0 0 chrX 11683672 11683710 -154966586 + (TTA)n Simple_repeat Simple_repeat 2 39 0 4 674 279 315 33 0 chrX 11683793 11683885 -154966411 + RSINE1 SINE B4 2 96 -69 4 674 399 21 0 0 chrX 11683931 11683979 -154966317 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 674 525 76 0 0 chrX 11683979 11684058 -154966238 + (GA)n Simple_repeat Simple_repeat 1 79 0 4 674 207 69 0 0 chrX 11684058 11684087 -154966209 + (CAA)n Simple_repeat Simple_repeat 1 29 0 4 674 713 276 130 4 chrX 11684722 11684969 -154965327 + MLT1B LTR MaLR 35 312 -78 4 674 267 299 11 44 chrX 11685061 11685152 -154965144 + MLT1H1 LTR MaLR 71 158 -397 4 674 500 184 132 0 chrX 11685323 11685437 -154964859 + B1_Mur1 SINE Alu 1 129 -20 4 674 381 22 0 0 chrX 11685443 11685489 -154964807 + (GA)n Simple_repeat Simple_repeat 1 46 0 4 674 433 274 0 0 chrX 11685511 11685606 -154964690 - B3 SINE B2 -118 98 4 4 674 815 100 0 104 chrX 11685647 11685848 -154964448 + CT-rich Low_complexity Low_complexity 1 180 0 4 674 708 192 20 20 chrX 11685853 11686002 -154964294 - B1_Mur2 SINE Alu 0 149 1 4 674 297 308 0 0 chrX 11686068 11686133 -154964163 + ID4_ SINE ID 12 76 -7 4 674 240 111 0 0 chrX 11686135 11686171 -154964125 + (CAA)n Simple_repeat Simple_repeat 1 36 0 4 674 380 240 0 0 chrX 11686339 11686414 -154963882 + PB1D10 SINE Alu 2 76 -41 4 674 754 199 14 0 chrX 11686414 11686555 -154963741 + B1_Mur1 SINE Alu 1 143 -6 4 674 353 319 25 78 chrX 11686555 11686666 -154963630 + B1F SINE Alu 80 123 -26 4 674 181 222 0 0 chrX 11686674 11686710 -154963586 - MIR SINE MIR -151 111 76 4 674 312 264 55 0 chrX 11686900 11686991 -154963305 - MIR SINE MIR -91 171 76 4 674 646 93 84 0 chrX 11687023 11687130 -154963166 + LTRIS5 LTR ERV1 1 116 -331 4 674 985 187 29 15 chrX 11687127 11687333 -154962963 + LTRIS5 LTR ERV1 227 435 -12 4 674 513 198 0 30 chrX 11687407 11687501 -154962795 + ID_B1 SINE B4 2 92 -132 4 674 629 299 17 124 chrX 11687501 11687742 -154962554 + ID_B1 SINE B4 1 215 -9 4 674 215 224 61 0 chrX 11687699 11687748 -154962548 + PB1D7 SINE Alu 66 117 -3 4 674 730 159 0 76 chrX 11689031 11689188 -154961108 + B1_Mur3 SINE Alu 5 149 0 4 674 203 265 157 33 chrX 11689260 11689381 -154960915 - MIRb SINE MIR -110 158 23 4 674 257 344 95 25 chrX 11689417 11689575 -154960721 - MER5A DNA MER1_type -3 186 18 4 674 653 267 16 46 chrX 11689686 11690161 -154960135 - RMER17C LTR ERVK -32 378 14 4 674 192 97 0 0 chrX 11690167 11690198 -154960098 + (T)n Simple_repeat Simple_repeat 1 31 0 4 674 678 23 11 0 chrX 11690199 11690287 -154960009 - B1_Mus2 SINE Alu 0 147 59 4 674 1061 188 76 0 chrX 11690428 11690625 -154959671 - B3 SINE B2 0 216 5 4 674 258 152 0 0 chrX 11690629 11690688 -154959608 + T-rich Low_complexity Low_complexity 1 59 0 4 674 819 99 0 0 chrX 11690688 11690809 -154959487 - B1_Mus1 SINE Alu 0 148 28 4 674 375 242 164 0 chrX 11690810 11690938 -154959358 - B1F2 SINE Alu 0 149 1 4 674 311 224 47 121 chrX 11690979 11691102 -154959194 + PB1D10 SINE Alu 12 149 0 4 674 398 248 101 36 chrX 11691302 11691440 -154958856 + B1_Mur1 SINE Alu 1 147 -2 4 674 261 0 0 0 chrX 11691603 11691632 -154958664 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 674 290 282 46 107 chrX 11691632 11691763 -154958533 - B1F SINE Alu -11 138 16 4 674 827 168 24 6 chrX 11691773 11691943 -154958353 - B3 SINE B2 -9 184 3 4 674 434 298 16 16 chrX 11692108 11692231 -154958065 - B1F SINE Alu -7 142 20 4 674 498 17 0 0 chrX 11692288 11692347 -154957949 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 674 247 182 23 0 chrX 11692354 11692398 -154957898 - RSINE1 SINE B4 -108 57 13 4 674 496 232 168 0 chrX 11692433 11692558 -154957738 - B1F SINE Alu -1 148 3 4 674 247 315 96 0 chrX 11692607 11692680 -154957616 + ID2 SINE ID 4 83 0 4 674 769 302 136 35 chrX 11692691 11693206 -154957090 + L1ME3A LINE L1 5595 6161 -12 4 674 426 20 0 0 chrX 11693234 11693285 -154957011 + (CAG)n Simple_repeat Simple_repeat 3 53 0 4 674 423 0 0 0 chrX 11693865 11693912 -154956384 + (TAA)n Simple_repeat Simple_repeat 1 47 0 4 674 1270 96 11 22 chrX 11694194 11694375 -154955921 + B2_Mm1t SINE B2 1 179 -14 4 674 301 123 316 17 chrX 11694426 11694540 -154955756 + B2_Mm2 SINE B2 47 194 -1 4 674 385 364 65 20 chrX 11694811 11695058 -154955238 + MLT1H LTR MaLR 44 301 -248 4 674 21 57 0 0 chrX 11695478 11695513 -154954783 + AT_rich Low_complexity Low_complexity 1 35 0 4 674 531 302 0 35 chrX 11695614 11695758 -154954538 + B1F SINE Alu 3 141 -8 4 674 282 29 0 0 chrX 11695782 11695817 -154954479 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 674 314 167 0 12 chrX 11695817 11695902 -154954394 + GA-rich Low_complexity Low_complexity 1 84 0 4 674 258 315 112 0 chrX 11695921 11696010 -154954286 - PB1 SINE Alu -26 101 3 4 674 937 127 42 14 chrX 11696515 11696659 -154953637 - B1_Mur2 SINE Alu 0 149 2 4 674 284 297 0 90 chrX 11696847 11696958 -154953338 - BC1_Mm scRNA scRNA -50 102 2 4 674 261 235 118 0 chrX 11697021 11697089 -154953207 - RSINE1 SINE B4 -87 78 3 4 674 219 296 0 78 chrX 11697089 11697165 -154953131 - ID_B1 SINE B4 -132 92 23 4 674 1169 48 7 7 chrX 11697198 11697344 -154952952 + B1_Mm SINE Alu 2 147 0 4 674 213 39 0 0 chrX 11697344 11697370 -154952926 + (A)n Simple_repeat Simple_repeat 1 26 0 4 674 342 266 0 0 chrX 11697901 11697980 -154952316 - RSINE1 SINE B4 -76 89 11 4 674 252 0 0 0 chrX 11698018 11698046 -154952250 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 4 674 399 310 20 40 chrX 11698052 11698203 -154952093 - ID_B1 SINE B4 -9 215 68 4 674 279 273 12 49 chrX 11698220 11698301 -154951995 - B1F SINE Alu -71 78 1 4 674 410 270 30 0 chrX 11698730 11698830 -154951466 + PB1D10 SINE Alu 13 115 -2 4 674 718 118 0 0 chrX 11699047 11699157 -154951139 + B1_Mur3 SINE Alu 32 141 -8 4 674 253 365 121 21 chrX 11699203 11699288 -154951008 + B4A SINE B4 21 174 -118 4 674 261 167 55 18 chrX 11699288 11699343 -154950953 + MT2B2 LTR ERVL 184 240 -344 4 674 307 117 217 0 chrX 11699304 11699364 -154950932 + PB1D10 SINE Alu 44 116 -1 4 674 284 296 0 27 chrX 11699374 11699447 -154950849 + ID4_ SINE ID 3 73 -10 4 674 239 182 325 0 chrX 11699499 11699576 -154950720 + PB1 SINE Alu 21 122 -5 4 674 605 49 0 12 chrX 11700710 11700792 -154949504 + (GGAGA)n Simple_repeat Simple_repeat 1 81 0 4 674 210 343 0 15 chrX 11701258 11701326 -154948970 + L2b LINE L2 3304 3370 -5 4 674 222 300 0 0 chrX 11702370 11702470 -154947826 + (TG)n Simple_repeat Simple_repeat 1 100 0 5 674 21 36 0 0 chrX 11705252 11705280 -154945016 + GC_rich Low_complexity Low_complexity 1 28 0 5 674 257 0 0 29 chrX 11705582 11705616 -154944680 + (CCCCCG)n Simple_repeat Simple_repeat 3 35 0 5 674 189 301 42 78 chrX 11707469 11707660 -154942636 - MIRc SINE MIR -42 226 43 5 674 387 0 0 0 chrX 11710201 11710244 -154940052 + (TC)n Simple_repeat Simple_repeat 1 43 0 5 674 405 16 48 0 chrX 11710244 11710305 -154939991 + (CA)n Simple_repeat Simple_repeat 1 65 0 5 674 339 44 0 0 chrX 11711369 11711414 -154938882 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 674 603 0 0 0 chrX 11712594 11712661 -154937635 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 674 180 0 0 0 chrX 11712661 11712680 -154937616 + (CG)n Simple_repeat Simple_repeat 2 21 0 5 674 180 0 0 0 chrX 11712707 11712727 -154937569 + (CGGGGG)n Simple_repeat Simple_repeat 2 21 0 5 674 24 32 0 0 chrX 11712891 11712922 -154937374 + AT_rich Low_complexity Low_complexity 1 31 0 5 674 186 143 0 0 chrX 11713017 11713052 -154937244 + (CCCCCT)n Simple_repeat Simple_repeat 5 39 0 5 674 1143 0 0 0 chrX 11713271 11713398 -154936898 + (GA)n Simple_repeat Simple_repeat 2 128 0 5 674 357 195 88 102 chrX 11715781 11715806 -154934490 + MT2B LTR ERVL 130 152 -449 5 674 714 175 29 0 chrX 11715806 11715943 -154934353 + B1_Mus2 SINE Alu 1 141 -6 5 674 414 0 0 0 chrX 11716318 11716364 -154933932 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 674 348 24 0 0 chrX 11716684 11716725 -154933571 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 674 180 0 0 0 chrX 11717758 11717778 -154932518 + (TGGGGG)n Simple_repeat Simple_repeat 1 20 0 5 674 31 0 0 0 chrX 11718147 11718178 -154932118 + AT_rich Low_complexity Low_complexity 1 31 0 5 674 755 103 91 45 chrX 11718246 11718378 -154931918 + B1_Mur3 SINE Alu 5 142 -7 5 674 270 0 0 0 chrX 11718379 11718409 -154931887 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 674 1228 81 0 6 chrX 11718668 11718843 -154931453 + B2_Mm2 SINE B2 2 175 -20 5 674 492 275 119 13 chrX 11718979 11719130 -154931166 + B3A SINE B2 10 176 -22 5 674 888 216 32 0 chrX 11719179 11719364 -154930932 - B3 SINE B2 -25 191 1 5 674 806 94 0 0 chrX 11719401 11719518 -154930778 + B1_Mur4 SINE Alu 34 150 0 5 674 750 284 29 9 chrX 11719748 11719958 -154930338 + ID_B1 SINE B4 9 222 -2 5 674 315 261 0 0 chrX 11720136 11720205 -154930091 + ID4 SINE ID 5 73 -10 5 674 241 177 104 75 chrX 11720409 11720476 -154929820 - ID4 SINE ID -13 70 2 5 674 858 25 0 104 chrX 11720601 11720736 -154929560 - B1_Mus1 SINE Alu -20 128 8 5 674 1207 78 6 16 chrX 11720844 11721026 -154929270 + (GAAAA)n Simple_repeat Simple_repeat 1 180 0 5 674 207 0 0 0 chrX 11721144 11721167 -154929129 + (TTC)n Simple_repeat Simple_repeat 2 24 0 5 674 220 344 0 0 chrX 11721251 11721315 -154928981 - MER91A DNA Tip100 -115 81 18 5 674 1128 202 20 10 chrX 11721637 11721837 -154928459 + B3 SINE B2 2 203 -13 5 674 2468 118 24 55 chrX 11722777 11723192 -154927104 + Lx3C LINE L1 6363 6769 -207 5 674 423 0 0 0 chrX 11723192 11723239 -154927057 + (TAGA)n Simple_repeat Simple_repeat 1 47 0 5 674 2468 180 8 26 chrX 11723239 11723354 -154926942 + Lx3C LINE L1 6770 6976 0 5 674 833 304 122 93 chrX 11723361 11723822 -154926474 + MLT1G LTR MaLR 18 494 -85 5 674 463 269 44 57 chrX 11723869 11724027 -154926269 + RSINE1 SINE B4 2 157 -8 5 674 227 296 30 74 chrX 11724131 11724145 -154926151 - YREP_Mm Unknown Unknown -1497 315 187 5 674 910 66 16 0 chrX 11724145 11724266 -154926030 + B1_Mus1 SINE Alu 16 138 -10 5 674 270 0 0 0 chrX 11724294 11724324 -154925972 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 674 219 22 41 82 chrX 11724324 11724373 -154925923 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 5 674 1014 212 5 10 chrX 11724373 11724568 -154925728 + B3 SINE B2 14 207 -9 5 674 326 236 128 11 chrX 11724608 11724702 -154925594 - PB1D9 SINE Alu 0 120 16 5 674 353 257 0 0 chrX 11725303 11725377 -154924919 + PB1 SINE Alu 42 115 -12 5 674 1178 80 0 0 chrX 11725378 11725529 -154924767 + B2_Mm2 SINE B2 1 151 -44 5 674 1169 74 0 0 chrX 11725692 11725841 -154924455 - B2_Mm2 SINE B2 -46 149 1 5 674 25 31 0 0 chrX 11725934 11725966 -154924330 + AT_rich Low_complexity Low_complexity 1 32 0 5 674 276 100 0 0 chrX 11725966 11726006 -154924290 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 5 674 326 312 88 41 chrX 11726034 11726181 -154924115 + B4A SINE B4 5 158 -134 5 674 221 173 250 0 chrX 11726678 11726730 -154923566 - B1F1 SINE Alu -9 140 76 5 674 368 300 76 15 chrX 11727042 11727174 -154923122 - MIRb SINE MIR -18 250 111 5 674 189 272 129 81 chrX 11727245 11727369 -154922927 - L2c LINE L2 -14 3373 3244 5 674 315 0 0 0 chrX 11728676 11728711 -154921585 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 674 411 21 0 0 chrX 11731231 11731279 -154919017 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 674 22 0 0 0 chrX 11733511 11733533 -154916763 + GC_rich Low_complexity Low_complexity 1 22 0 5 674 374 274 10 10 chrX 11734048 11734144 -154916152 - B1F SINE Alu -51 98 3 5 674 444 19 0 0 chrX 11736650 11736703 -154913593 + (TC)n Simple_repeat Simple_repeat 1 53 0 5 674 22 56 0 0 chrX 11737186 11737222 -154913074 + GC_rich Low_complexity Low_complexity 1 36 0 5 674 180 290 101 61 chrX 11737826 11737925 -154912371 - MIR SINE MIR -62 146 44 5 674 411 21 0 0 chrX 11738357 11738405 -154911891 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 674 432 51 0 0 chrX 11738405 11738463 -154911833 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 674 385 239 15 100 chrX 11738586 11738716 -154911580 - PB1D7 SINE Alu 0 120 2 5 674 503 282 94 30 chrX 11738738 11738783 -154911513 - B3 SINE B2 0 216 164 5 674 201 94 0 0 chrX 11738783 11738815 -154911481 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 674 556 239 68 20 chrX 11738815 11738970 -154911326 - B3A SINE B2 -53 163 3 5 674 2956 43 0 3 chrX 11739075 11739422 -154910874 + ORR1A1 LTR MaLR 1 346 0 5 674 14619 41 14 1 chrX 11739422 11741191 -154909105 + ORR1A1-int LTR MaLR 1 1792 0 5 674 3006 38 0 3 chrX 11741191 11741538 -154908758 + ORR1A1 LTR MaLR 1 346 0 5 674 251 265 72 0 chrX 11742829 11742912 -154907384 + B4A SINE B4 4 92 -200 5 674 969 162 0 0 chrX 11743178 11743326 -154906970 + B1_Mur3 SINE Alu 2 149 0 5 674 1201 200 0 40 chrX 11743329 11743553 -154906743 - B3 SINE B2 0 216 2 5 674 244 269 37 49 chrX 11743576 11743658 -154906638 - ID4_ SINE ID -1 82 2 5 674 219 344 75 11 chrX 11743684 11743778 -154906518 - L2a LINE L2 -21 3405 3306 5 674 1078 85 11 0 chrX 11743821 11743998 -154906298 + (TCC)n Simple_repeat Simple_repeat 2 180 0 5 674 353 227 64 64 chrX 11744057 11744151 -154906145 - BC1_Mm scRNA scRNA -58 94 1 5 674 378 42 0 0 chrX 11744196 11744244 -154906052 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 674 505 270 0 81 chrX 11744250 11744399 -154905897 - RSINE1 SINE B4 -27 138 2 5 674 406 254 27 95 chrX 11744458 11744477 -154905819 + ID_B1 SINE B4 81 218 -6 5 674 647 217 23 0 chrX 11744477 11744606 -154905690 + B1_Mur1 SINE Alu 12 143 -6 5 674 210 370 40 27 chrX 11744603 11744678 -154905618 - B1_Mus2 SINE Alu -66 81 6 5 674 846 153 35 7 chrX 11744703 11744848 -154905448 - B1_Mur2 SINE Alu 0 149 1 5 674 192 40 0 0 chrX 11745138 11745163 -154905133 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 5 674 262 302 147 28 chrX 11745168 11745345 -154904951 - RMER20A LTR ERVK -165 351 154 5 674 615 163 0 20 chrX 11745850 11745950 -154904346 + B1_Mur4 SINE Alu 1 98 -52 5 674 215 357 50 30 chrX 11745960 11746061 -154904235 + RSINE1 SINE B4 28 130 -35 5 674 210 37 0 0 chrX 11746068 11746095 -154904201 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 5 674 876 82 0 0 chrX 11746095 11746217 -154904079 + (CA)n Simple_repeat Simple_repeat 1 122 0 5 674 964 162 0 0 chrX 11746242 11746384 -154903912 + B1_Mus1 SINE Alu 2 143 -5 5 674 444 19 0 0 chrX 11746385 11746438 -154903858 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 5 674 181 311 81 0 chrX 11746486 11746560 -154903736 + MIR SINE MIR 50 129 -79 5 674 498 220 165 25 chrX 11746562 11746683 -154903613 - B1F1 SINE Alu -3 146 9 5 674 358 241 0 0 chrX 11746724 11746803 -154903493 + ID4 SINE ID 5 83 0 5 674 285 98 0 0 chrX 11746939 11746980 -154903316 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 5 674 341 284 0 135 chrX 11746981 11747107 -154903189 - ID_B1 SINE B4 -2 222 114 5 674 258 293 0 29 chrX 11747321 11747423 -154902873 + CT-rich Low_complexity Low_complexity 3 101 0 5 674 411 194 98 80 chrX 11747990 11748102 -154902194 + PB1D10 SINE Alu 4 117 0 5 674 226 0 0 56 chrX 11748107 11748143 -154902153 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 5 674 389 262 88 104 chrX 11748143 11748257 -154902039 + CYRA11_Mm Unknown Y-chromosome 65 174 -443 5 674 854 228 57 5 chrX 11748257 11748469 -154901827 - URR1B DNA MER1_type -1 224 2 5 674 719 227 0 34 chrX 11748478 11748624 -154901672 + B3 SINE B2 74 214 -2 5 674 753 176 7 34 chrX 11748672 11748819 -154901477 + B1_Mus2 SINE Alu 5 147 0 5 674 208 85 42 21 chrX 11748974 11749022 -154901274 + (TGGG)n Simple_repeat Simple_repeat 3 51 0 5 674 562 314 35 64 chrX 11749061 11749343 -154900953 - B4 SINE B4 -16 276 3 5 674 347 189 224 9 chrX 11749448 11749460 -154900836 - BC1_Mm scRNA scRNA -19 133 122 6 674 270 0 0 0 chrX 11749460 11749490 -154900806 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 6 674 347 189 224 9 chrX 11749490 11749584 -154900712 - BC1_Mm scRNA scRNA -31 121 5 6 674 180 0 0 0 chrX 11749588 11749608 -154900688 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 674 448 279 0 98 chrX 11749649 11749792 -154900504 + ORR1C2 LTR MaLR 5 133 -246 6 674 705 204 34 71 chrX 11750140 11750336 -154899960 - B3 SINE B2 0 195 1 6 674 444 86 0 0 chrX 11750336 11750406 -154899890 + (TCC)n Simple_repeat Simple_repeat 3 72 0 6 674 3799 226 41 16 chrX 11750419 11751282 -154899014 - RMER1A Other Other -1 1029 146 6 674 815 240 126 15 chrX 11751295 11751494 -154898802 - ID_B1 SINE B4 -2 222 2 6 674 196 296 137 21 chrX 11751504 11751751 -154898545 + L2c LINE L2 3052 3371 -55 6 674 313 314 51 34 chrX 11752290 11752465 -154897831 - MIRc SINE MIR -64 204 27 6 674 728 222 189 22 chrX 11753619 11753799 -154896497 + ORR1C2 LTR MaLR 175 384 0 6 674 528 16 0 0 chrX 11753910 11753971 -154896325 + (TC)n Simple_repeat Simple_repeat 2 62 0 6 674 1196 75 0 0 chrX 11753979 11754125 -154896171 - B1_Mus2 SINE Alu -1 146 1 6 674 534 103 0 0 chrX 11754402 11754480 -154895816 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 6 674 680 248 14 7 chrX 11754480 11754610 -154895686 - B1_Mur2 SINE Alu -12 137 6 6 674 804 281 29 10 chrX 11754628 11754836 -154895460 - B4A SINE B4 -77 215 4 6 674 233 292 86 26 chrX 11754939 11755055 -154895241 + MLT1I LTR MaLR 14 136 -275 6 674 347 340 47 9 chrX 11755161 11755268 -154895028 + B1F1 SINE Alu 23 133 -16 6 674 1181 120 0 116 chrX 11755287 11755503 -154894793 - ORR1C2 LTR MaLR -190 194 4 6 674 311 164 0 71 chrX 11755779 11755849 -154894447 + B1_Mur3 SINE Alu 54 147 -2 6 674 452 117 13 0 chrX 11755920 11755997 -154894299 + (TTTC)n Simple_repeat Simple_repeat 2 79 0 6 674 648 150 80 119 chrX 11755997 11756148 -154894148 - B1_Mus2 SINE Alu 0 147 3 6 674 610 276 43 33 chrX 11756481 11756691 -154893605 - B3 SINE B2 -4 212 1 6 674 207 0 0 0 chrX 11756802 11756825 -154893471 + (T)n Simple_repeat Simple_repeat 1 23 0 6 674 237 65 0 0 chrX 11757493 11757524 -154892772 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 674 936 169 7 0 chrX 11757533 11757681 -154892615 + B1_Mur2 SINE Alu 1 149 0 6 674 576 77 0 0 chrX 11757691 11757769 -154892527 + (GA)n Simple_repeat Simple_repeat 2 79 0 6 674 454 232 8 51 chrX 11757914 11758032 -154892264 - PB1D9 SINE Alu -6 114 2 6 674 530 226 167 43 chrX 11758094 11758256 -154892040 - B3A SINE B2 -16 182 1 6 674 377 161 140 65 chrX 11758268 11758361 -154891935 - RSINE1 SINE B4 -1 164 65 6 674 425 283 185 41 chrX 11758539 11758782 -154891514 - B4A SINE B4 -14 278 1 6 674 414 0 0 0 chrX 11758822 11758868 -154891428 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 674 579 216 6 92 chrX 11759064 11759227 -154891069 - B1_Mur4 SINE Alu 0 150 2 6 674 297 0 0 0 chrX 11759261 11759294 -154891002 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 674 356 211 119 82 chrX 11759294 11759418 -154890878 - RSINE1 SINE B4 -13 152 24 6 674 589 170 0 0 chrX 11759622 11759716 -154890580 + B1_Mm SINE Alu 5 98 -49 6 674 240 261 0 43 chrX 11759716 11759749 -154890547 + T-rich Low_complexity Low_complexity 58 89 0 6 674 1128 83 7 7 chrX 11759749 11759895 -154890401 - B1_Mus2 SINE Alu -1 146 1 6 674 240 261 0 43 chrX 11759895 11759918 -154890378 + T-rich Low_complexity Low_complexity 37 57 0 6 674 1407 89 0 16 chrX 11759918 11760112 -154890184 - B2_Mm2 SINE B2 -2 193 3 6 674 240 261 0 43 chrX 11760112 11760146 -154890150 + T-rich Low_complexity Low_complexity 3 36 0 6 674 258 105 0 0 chrX 11760151 11760189 -154890107 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 674 478 295 24 16 chrX 11760195 11760319 -154889977 - RSINE1 SINE B4 -39 126 2 6 674 782 275 38 10 chrX 11760350 11760559 -154889737 - MER58A DNA MER1_type 0 224 10 6 674 225 229 0 0 chrX 11760573 11760621 -154889675 - MER33 DNA MER1_type 0 324 277 6 674 282 56 0 0 chrX 11760736 11760772 -154889524 + (TATG)n Simple_repeat Simple_repeat 3 38 0 6 674 487 210 172 86 chrX 11760772 11760923 -154889373 - RSINE1 SINE B4 0 165 2 6 674 180 0 0 0 chrX 11761189 11761209 -154889087 + (TC)n Simple_repeat Simple_repeat 1 20 0 6 674 306 0 0 0 chrX 11761209 11761242 -154889054 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 674 459 0 0 0 chrX 11761242 11761292 -154889004 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 674 349 250 242 30 chrX 11761296 11761428 -154888868 - RSINE1 SINE B4 0 165 6 6 674 740 113 84 53 chrX 11761641 11761772 -154888524 - B1_Mm SINE Alu 0 147 13 6 674 5536 89 14 8 chrX 11761775 11762508 -154887788 - RMER19A LTR ERVK 0 737 1 6 674 536 331 18 42 chrX 11763155 11763322 -154886974 + B3A SINE B2 3 165 -33 6 674 279 0 0 0 chrX 11763333 11763364 -154886932 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 6 674 576 155 10 0 chrX 11763406 11763503 -154886793 + ORR1D2-int LTR MaLR 1273 1370 0 6 674 1298 226 52 93 chrX 11763503 11763691 -154886605 + ORR1D2 LTR MaLR 1 165 -205 6 674 2256 126 78 24 chrX 11763691 11764065 -154886231 + ORR1B1 LTR MaLR 1 394 0 6 674 1298 226 52 93 chrX 11764065 11764262 -154886034 + ORR1D2 LTR MaLR 166 370 0 6 674 480 311 70 44 chrX 11764298 11764527 -154885769 + B4A SINE B4 58 292 0 6 674 953 167 0 13 chrX 11764554 11764706 -154885590 + B1_Mur4 SINE Alu 1 150 0 6 674 667 316 123 37 chrX 11765584 11765994 -154884302 - MLT1G3 LTR MaLR -17 538 78 6 674 2171 109 28 12 chrX 11766007 11766331 -154883965 - ORR1A4 LTR MaLR 0 329 1 6 674 401 243 133 19 chrX 11766403 11766508 -154883788 - B1F SINE Alu 0 127 11 6 674 287 326 7 66 chrX 11767158 11767174 -154883122 + B4A SINE B4 77 218 -74 6 674 670 259 0 0 chrX 11767174 11767309 -154882987 + B1F1 SINE Alu 6 140 -9 6 674 1389 89 15 25 chrX 11767889 11768085 -154882211 - B2_Mm2 SINE B2 0 195 2 6 674 1230 194 103 98 chrX 11768108 11768152 -154882144 - Lx9 LINE L1 -2 7642 7606 6 674 473 121 12 0 chrX 11768152 11768235 -154882061 + (TAGA)n Simple_repeat Simple_repeat 3 86 0 6 674 1230 194 103 98 chrX 11768235 11768589 -154881707 - Lx9 LINE L1 -39 7605 7242 6 674 366 259 65 57 chrX 11768608 11768731 -154881565 - B1F SINE Alu -25 124 1 6 674 333 148 0 0 chrX 11769037 11769118 -154881178 + (GA)n Simple_repeat Simple_repeat 2 82 0 6 674 234 0 0 0 chrX 11769125 11769151 -154881145 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 674 342 0 0 0 chrX 11769151 11769189 -154881107 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 674 1314 187 157 25 chrX 11770102 11770426 -154879870 + ORR1D2 LTR MaLR 1 367 -3 6 674 204 125 0 0 chrX 11770429 11770461 -154879835 + (TTCC)n Simple_repeat Simple_repeat 3 34 0 6 674 255 243 26 26 chrX 11770555 11770631 -154879665 + MTE2a LTR MaLR 281 356 -23 6 674 1921 177 28 79 chrX 11771019 11771485 -154878811 + Lx4B LINE L1 6613 7054 -4 6 674 339 291 65 146 chrX 11771501 11771562 -154878734 + ID SINE ID 6 74 -150 6 674 252 0 0 0 chrX 11771562 11771590 -154878706 + (CAA)n Simple_repeat Simple_repeat 2 29 0 6 674 339 291 65 146 chrX 11771590 11771713 -154878583 + ID_B1 SINE B4 75 175 -49 6 674 405 231 0 42 chrX 11771626 11771721 -154878575 + PB1D10 SINE Alu 11 101 -16 6 674 261 0 0 0 chrX 11771721 11771750 -154878546 + (TG)n Simple_repeat Simple_repeat 1 29 0 6 674 720 121 0 0 chrX 11771750 11771891 -154878405 + (GA)n Simple_repeat Simple_repeat 2 142 0 6 674 429 250 0 30 chrX 11771917 11772016 -154878280 + PB1D7 SINE Alu 24 119 -1 6 674 1414 222 73 59 chrX 11772100 11772455 -154877841 + MTEb LTR MaLR 8 367 -12 6 674 613 271 0 29 chrX 11773366 11773503 -154876793 + MLT1J LTR MaLR 71 203 -309 6 674 295 259 0 110 chrX 11773511 11773602 -154876694 - ID4_ SINE ID -1 82 2 6 674 436 208 0 94 chrX 11773595 11773609 -154876687 - B1_Mur3 SINE Alu -51 98 89 6 674 441 0 0 0 chrX 11773609 11773658 -154876638 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 674 315 0 0 0 chrX 11773658 11773692 -154876604 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 674 473 207 0 33 chrX 11773692 11773782 -154876514 - B1_Mur4 SINE Alu -61 89 3 6 674 414 256 11 34 chrX 11773824 11773913 -154876383 + RSINE1 SINE B4 48 134 -31 6 674 236 30 30 0 chrX 11773937 11773970 -154876326 + (TAA)n Simple_repeat Simple_repeat 3 36 0 6 674 230 73 24 0 chrX 11773980 11774021 -154876275 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 6 674 768 174 57 21 chrX 11774021 11774162 -154876134 - B1_Mus2 SINE Alu -1 146 1 6 674 411 299 52 7 chrX 11774177 11774312 -154875984 + B1_Mur1 SINE Alu 1 141 -8 6 674 189 0 0 0 chrX 11774336 11774357 -154875939 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 674 704 258 25 71 chrX 11774359 11774555 -154875741 - B4A SINE B4 -23 269 83 6 674 511 289 108 6 chrX 11774583 11774750 -154875546 - B3A SINE B2 -14 184 1 6 674 330 264 2 41 chrX 11774750 11774847 -154875449 - B4A SINE B4 -73 92 2 6 674 351 132 0 0 chrX 11774911 11774964 -154875332 - PB1D7 SINE Alu -2 118 66 6 674 452 316 75 66 chrX 11775130 11775371 -154874925 + MLT1F LTR MaLR 27 269 -279 6 674 343 229 14 28 chrX 11775734 11775806 -154874490 - MLT1C LTR MaLR -89 506 436 6 674 404 307 14 49 chrX 11775905 11776067 -154874229 - MLT1C LTR MaLR -8 459 230 6 674 663 147 14 14 chrX 11776094 11776239 -154874057 + CT-rich Low_complexity Low_complexity 3 147 0 6 674 266 0 0 29 chrX 11776351 11776386 -154873910 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 674 987 122 0 7 chrX 11776386 11776518 -154873778 - B1_Mur2 SINE Alu -9 140 9 7 674 227 331 60 87 chrX 11776495 11776644 -154873652 - MLT1C LTR MaLR -317 150 6 6 674 351 256 134 0 chrX 11776668 11776750 -154873546 - B1_Mur3 SINE Alu -55 94 2 7 674 272 256 111 44 chrX 11776756 11776846 -154873450 - MLT1G LTR MaLR -357 234 139 7 674 403 306 81 7 chrX 11776906 11777054 -154873242 - MLT1B LTR MaLR -6 384 226 7 674 408 155 0 0 chrX 11777056 11777127 -154873169 + (CTG)n Simple_repeat Simple_repeat 1 71 0 7 674 893 178 0 7 chrX 11777135 11777282 -154873014 - B1_Mur4 SINE Alu -4 146 1 7 674 21 0 0 0 chrX 11777296 11777317 -154872979 + AT_rich Low_complexity Low_complexity 1 21 0 7 674 1641 42 0 0 chrX 11777321 11777512 -154872784 - B2_Mm1a SINE B2 -1 192 2 7 674 379 285 174 61 chrX 11777525 11777738 -154872558 - MLT1B LTR MaLR -148 242 6 7 674 280 235 31 0 chrX 11777964 11778037 -154872259 + MTE2b LTR MaLR 1 81 -298 7 674 258 238 0 87 chrX 11778020 11778089 -154872207 + B4A SINE B4 230 292 0 7 674 232 300 29 0 chrX 11778222 11778292 -154872004 + AluG_3 SINE Alu 149 220 -91 7 674 791 336 58 42 chrX 11778306 11778685 -154871611 + LTR82B Low_complexity ERVL 304 688 -142 7 674 273 29 0 0 chrX 11778685 11778719 -154871577 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 674 349 188 101 0 chrX 11778822 11778891 -154871405 - B4 SINE B4 -2 290 215 7 674 192 125 0 0 chrX 11778922 11778954 -154871342 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 674 994 277 52 7 chrX 11778995 11779264 -154871032 - B4 SINE B4 -10 282 2 7 674 532 344 8 0 chrX 11779301 11779432 -154870864 - RSINE1 SINE B4 -33 132 1 7 674 368 256 11 22 chrX 11779438 11779530 -154870766 - B1_Mm SINE Alu -56 91 1 7 674 1106 237 127 32 chrX 11779595 11779966 -154870330 + Charlie4a DNA MER1_type 5 410 -98 7 674 798 345 48 13 chrX 11779998 11780391 -154869905 - Charlie7 DNA MER1_type -1944 668 262 7 674 351 44 0 0 chrX 11780478 11780523 -154869773 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 674 653 200 26 70 chrX 11780523 11780670 -154869626 - B1_Mur3 SINE Alu -8 141 1 7 674 1180 82 0 0 chrX 11780870 11781017 -154869279 + B1_Mus1 SINE Alu 2 148 0 7 674 281 295 124 11 chrX 11781141 11781230 -154869066 + PB1D10 SINE Alu 6 104 -13 7 674 307 289 26 0 chrX 11781257 11781333 -154868963 + PB1D10 SINE Alu 31 108 -9 7 674 252 0 0 0 chrX 11781333 11781361 -154868935 + (AGGGGG)n Simple_repeat Simple_repeat 1 28 0 7 674 594 253 46 23 chrX 11781638 11781812 -154868484 + B3A SINE B2 21 198 0 7 674 1161 30 0 0 chrX 11781870 11782003 -154868293 + B1_Mus2 SINE Alu 2 134 -13 7 674 305 0 0 48 chrX 11782003 11782045 -154868251 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 7 674 940 161 161 0 chrX 11782164 11782357 -154867939 - ID_B1 SINE B4 0 224 1 7 674 296 299 191 0 chrX 11782471 11782628 -154867668 - HAL1 LINE L1 -1575 932 746 7 674 2652 116 35 5 chrX 11782634 11783033 -154867263 - MTC LTR MaLR -8 413 3 7 674 522 239 11 0 chrX 11783116 11783208 -154867088 + RSINE1 SINE B4 2 94 -71 7 674 211 121 17 17 chrX 11783241 11783300 -154866996 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 7 674 342 0 0 0 chrX 11783352 11783390 -154866906 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 674 561 295 8 0 chrX 11783435 11783557 -154866739 - RSINE1 SINE B4 -29 136 14 7 674 3081 174 32 11 chrX 11783557 11784120 -154866176 + RMER15 LTR ERVL 1 575 0 7 674 459 267 99 8 chrX 11784153 11784274 -154866022 - B1_Mur1 SINE Alu -8 141 10 7 674 709 200 133 0 chrX 11784292 11784442 -154865854 - B3 SINE B2 -42 174 5 7 674 527 211 130 0 chrX 11784456 11784579 -154865717 - ID_B1 SINE B4 -4 220 82 7 674 610 233 0 8 chrX 11784630 11784751 -154865545 - RSINE1 SINE B4 -43 122 3 7 674 379 256 0 12 chrX 11784762 11784845 -154865451 - ID4_ SINE ID -1 82 1 7 674 267 31 0 0 chrX 11785201 11785233 -154865063 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 7 674 730 191 25 0 chrX 11785344 11785501 -154864795 - L1MB5 LINE L1 -30 6144 5984 7 674 436 275 1 15 chrX 11785583 11785704 -154864592 - PB1D7 SINE Alu -21 128 13 7 674 716 238 115 37 chrX 11785760 11785932 -154864364 - L1MB3 LINE L1 -95 6088 5890 7 674 187 54 0 51 chrX 11785932 11785971 -154864325 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 7 674 716 238 115 37 chrX 11785971 11786042 -154864254 - L1MB3 LINE L1 -294 5889 5826 7 674 382 221 70 139 chrX 11786085 11786243 -154864053 - RSINE1 SINE B4 -16 149 3 7 674 282 250 94 57 chrX 11786318 11786424 -154863872 - L1MB3 LINE L1 -401 5782 5673 7 674 735 196 28 0 chrX 11786446 11786589 -154863707 - B1F SINE Alu 0 149 3 7 674 339 232 24 12 chrX 11786614 11786697 -154863599 - PB1D9 SINE Alu 0 120 37 7 674 446 321 29 21 chrX 11787258 11787398 -154862898 + B1F SINE Alu 9 149 0 7 674 719 187 22 0 chrX 11787432 11787571 -154862725 + B1_Mur4 SINE Alu 1 142 -8 7 674 215 217 16 48 chrX 11787618 11787681 -154862615 + ID4 SINE ID 14 74 -9 7 674 516 202 0 0 chrX 11787728 11787812 -154862484 + polypyrimidine Low_complexity Low_complexity 91 174 0 7 674 258 32 0 0 chrX 11787812 11787843 -154862453 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 674 516 202 0 0 chrX 11787843 11787931 -154862365 + polypyrimidine Low_complexity Low_complexity 3 90 0 7 674 273 242 0 0 chrX 11787950 11788115 -154862181 + CT-rich Low_complexity Low_complexity 2 166 0 7 674 573 166 29 17 chrX 11788104 11788455 -154861841 + (TCTG)n Simple_repeat Simple_repeat 1 355 0 7 674 227 36 0 0 chrX 11788455 11788483 -154861813 + (TC)n Simple_repeat Simple_repeat 2 29 0 7 674 378 0 0 0 chrX 11788483 11788525 -154861771 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 674 268 0 0 87 chrX 11789467 11789513 -154860783 + (CAGAGA)n Simple_repeat Simple_repeat 6 47 0 7 674 523 205 110 0 chrX 11789538 11789665 -154860631 + B1_Mur2 SINE Alu 1 141 -8 7 674 457 277 77 59 chrX 11789671 11789840 -154860456 - MLT1G1 LTR MaLR -388 191 20 7 674 414 216 144 0 chrX 11789862 11790001 -154860295 - MLT1B LTR MaLR -39 351 193 7 674 266 299 35 194 chrX 11790045 11790138 -154860158 - B1_Mur1 SINE Alu -2 147 67 7 674 1235 55 0 0 chrX 11790138 11790284 -154860012 - B1_Mus1 SINE Alu 0 148 3 7 674 439 261 0 196 chrX 11790284 11790338 -154859958 - ID_B1 SINE B4 -75 149 104 7 674 266 299 35 194 chrX 11790338 11790360 -154859936 - B1_Mur1 SINE Alu -83 66 5 7 674 576 0 0 0 chrX 11790364 11790428 -154859868 + (TTTC)n Simple_repeat Simple_repeat 3 66 0 7 674 1043 109 0 0 chrX 11790437 11790575 -154859721 - B1_Mus1 SINE Alu -8 140 3 7 674 216 0 0 0 chrX 11790578 11790602 -154859694 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 7 674 226 355 54 46 chrX 11790627 11790757 -154859539 - MLT1B LTR MaLR -250 140 10 7 674 368 263 198 35 chrX 11790779 11790976 -154859320 + B4A SINE B4 2 230 -62 7 674 323 302 108 24 chrX 11791068 11791234 -154859062 + LTR33C LTR ERVL 121 300 -329 7 674 429 20 0 0 chrX 11791556 11791606 -154858690 + (TC)n Simple_repeat Simple_repeat 1 50 0 7 674 270 0 0 0 chrX 11791606 11791635 -154858661 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 674 1383 62 45 0 chrX 11792420 11792598 -154857698 - B2_Mm2 SINE B2 -7 188 3 7 674 23 33 0 0 chrX 11792706 11792736 -154857560 + AT_rich Low_complexity Low_complexity 1 30 0 7 674 964 276 106 7 chrX 11792751 11793025 -154857271 + MER2 DNA MER2_type 31 331 -14 7 674 31 26 0 0 chrX 11793029 11793067 -154857229 + AT_rich Low_complexity Low_complexity 1 38 0 7 674 711 150 46 30 chrX 11793096 11793227 -154857069 - B1_Mur4 SINE Alu -1 149 17 7 674 411 211 99 11 chrX 11793285 11793376 -154856920 - RMER19C LTR ERVK 0 902 804 7 674 1080 52 7 0 chrX 11793385 11793521 -154856775 + B1_Mus2 SINE Alu 11 147 0 7 674 1715 221 123 80 chrX 11793518 11794029 -154856267 - RMER19C LTR ERVK -78 533 1 7 674 951 201 0 41 chrX 11794029 11794224 -154856072 + B3 SINE B2 24 210 -6 7 674 236 315 112 0 chrX 11794332 11794421 -154855875 - Charlie7 DNA MER1_type -2186 426 328 7 674 375 251 107 62 chrX 11794783 11794961 -154855335 + B3A SINE B2 4 189 -9 7 674 571 274 43 14 chrX 11795275 11795482 -154854814 - MLT1B LTR MaLR -122 268 56 7 674 711 188 0 0 chrX 11795485 11795661 -154854635 + (TG)n Simple_repeat Simple_repeat 2 177 0 7 674 484 253 271 0 chrX 11795698 11795868 -154854428 + ID_B1 SINE B4 1 216 -8 7 674 942 81 93 29 chrX 11795884 11796023 -154854273 - B1_Mus1 SINE Alu 0 148 1 7 675 557 302 7 61 chrX 11797816 11797964 -154852332 - RSINE1 SINE B4 0 165 26 7 675 897 114 71 0 chrX 11799051 11799191 -154851105 + B1_Mur4 SINE Alu 1 150 0 7 675 193 89 0 43 chrX 11799193 11799240 -154851056 + (CAAAAA)n Simple_repeat Simple_repeat 2 46 0 7 675 884 253 9 35 chrX 11799266 11799495 -154850801 + ID_B1 SINE B4 2 224 0 7 675 594 265 12 30 chrX 11799500 11799667 -154850629 + RSINE1 SINE B4 2 165 0 7 675 381 289 154 40 chrX 11799806 11800040 -154850256 - MER47B DNA MER2_type 0 418 118 7 675 548 188 20 0 chrX 11800095 11800196 -154850100 + B3 SINE B2 3 105 -111 7 675 1097 224 5 10 chrX 11800300 11800507 -154849789 - B3 SINE B2 -5 211 6 7 675 370 276 78 25 chrX 11800558 11800704 -154849592 + MIRb SINE MIR 68 228 -34 7 675 587 232 43 106 chrX 11801017 11801095 -154849201 - B4A SINE B4 0 292 225 7 675 204 40 0 0 chrX 11801095 11801120 -154849176 + (ATTG)n Simple_repeat Simple_repeat 2 26 0 7 675 587 232 43 106 chrX 11801120 11801248 -154849048 - B4A SINE B4 -68 224 99 7 675 251 257 85 124 chrX 11801139 11801268 -154849028 - MT2B LTR ERVL -326 275 152 8 675 710 85 0 19 chrX 11801283 11801391 -154848905 + (TTTC)n Simple_repeat Simple_repeat 4 109 0 8 675 353 22 22 0 chrX 11801391 11801437 -154848859 + (TATG)n Simple_repeat Simple_repeat 2 48 0 8 675 481 338 46 0 chrX 11801439 11801590 -154848706 - RSINE1 SINE B4 -5 160 3 8 675 993 281 9 9 chrX 11801591 11801821 -154848475 - B4A SINE B4 -62 230 1 8 675 288 295 26 0 chrX 11801830 11801908 -154848388 - ID4 SINE ID -3 80 1 8 675 487 340 36 36 chrX 11802183 11802461 -154847835 + LTR16A1 LTR ERVL 179 456 0 8 675 246 302 110 52 chrX 11802463 11802599 -154847697 - L3b LINE CR1 -290 192 49 8 675 401 179 12 0 chrX 11803202 11803286 -154847010 + CT-rich Low_complexity Low_complexity 2 86 0 8 675 253 209 0 80 chrX 11803305 11803318 -154846978 - ID_B1 SINE B4 -148 144 111 8 675 305 174 0 0 chrX 11803318 11803364 -154846932 - B1_Mus1 SINE Alu -97 51 6 8 675 541 273 25 15 chrX 11803557 11803725 -154846571 + B1F SINE Alu 5 285 -26 8 675 344 268 0 0 chrX 11803729 11803800 -154846496 + ID4 SINE ID 5 75 -8 8 675 244 268 48 5 chrX 11803843 11803915 -154846381 + PB1D7 SINE Alu 17 97 -52 8 675 746 224 86 10 chrX 11803938 11804136 -154846160 + B3 SINE B2 3 215 -1 8 675 486 295 9 0 chrX 11804152 11804257 -154846039 + RSINE1 SINE B4 16 121 -44 8 675 396 161 269 0 chrX 11804457 11804550 -154845746 + PB1D9 SINE Alu 1 118 -2 8 675 617 289 17 95 chrX 11804558 11804799 -154845497 + ID_B1 SINE B4 1 222 -2 8 675 279 264 108 72 chrX 11804810 11804977 -154845319 - L1MC1 LINE L1 -309 6024 5852 8 675 353 236 157 0 chrX 11804987 11805076 -154845220 + PB1D9 SINE Alu 2 104 -16 8 675 327 242 33 11 chrX 11805274 11805366 -154844930 + CT-rich Low_complexity Low_complexity 3 96 0 8 675 223 276 67 33 chrX 11805452 11805542 -154844754 - PB1D7 SINE Alu -15 105 13 8 675 233 276 52 87 chrX 11805517 11805540 -154844756 + RLTR25B LTR ERVK 399 461 -567 8 675 320 211 104 13 chrX 11805540 11805617 -154844679 + 4.5SRNA scRNA scRNA 3 86 -8 8 675 767 108 0 0 chrX 11805563 11805674 -154844622 + B1_Mus2 SINE Alu 36 146 -1 8 675 233 276 52 87 chrX 11805617 11805632 -154844664 + RLTR25B LTR ERVK 462 509 -519 8 675 180 111 0 0 chrX 11805739 11805766 -154844530 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 8 675 365 296 43 0 chrX 11805766 11805881 -154844415 - PB1 SINE Alu -2 125 6 8 675 278 309 12 0 chrX 11806599 11806680 -154843616 - ID4 SINE ID 0 83 2 8 675 231 354 12 12 chrX 11806731 11806814 -154843482 - ID4_ SINE ID 0 83 1 8 675 21 0 0 0 chrX 11806950 11806971 -154843325 + AT_rich Low_complexity Low_complexity 1 21 0 8 675 806 204 0 0 chrX 11806972 11807109 -154843187 - B1_Mur2 SINE Alu -1 148 12 8 675 243 175 0 0 chrX 11807128 11807185 -154843111 + (TG)n Simple_repeat Simple_repeat 1 57 0 8 675 365 276 120 16 chrX 11807362 11807487 -154842809 - B4 SINE B4 -154 138 1 8 675 269 188 0 0 chrX 11807493 11807541 -154842755 - B1_Mur1 SINE Alu -1 148 101 8 675 1216 55 0 7 chrX 11807594 11807742 -154842554 + B1_Mus2 SINE Alu 1 147 0 8 675 421 238 14 153 chrX 11808160 11808304 -154841992 - B1_Mur1 SINE Alu -19 130 7 8 675 218 312 0 48 chrX 11808240 11808324 -154841972 - B4 SINE B4 -140 152 73 8 675 333 250 125 0 chrX 11808314 11808410 -154841886 - PB1D10 SINE Alu 0 117 10 8 675 3283 5 0 44 chrX 11808526 11808910 -154841386 + IAPLTR1_Mm LTR ERVK 1 367 0 8 675 57100 20 17 1 chrX 11808910 11815284 -154835012 + IAPEz-int LTR ERVK 8 6481 0 8 675 3298 3 0 44 chrX 11815284 11815668 -154834628 + IAPLTR1_Mm LTR ERVK 1 367 0 8 675 300 233 121 11 chrX 11815733 11815824 -154834472 + RSINE1 SINE B4 2 102 -63 8 675 1714 153 35 168 chrX 11815907 11815958 -154834338 - ORR1C2 LTR MaLR -16 368 328 8 675 1407 60 11 27 chrX 11815958 11816146 -154834150 - B2_Mm2 SINE B2 -9 186 2 8 675 1714 153 35 168 chrX 11816146 11816518 -154833778 - ORR1C2 LTR MaLR -57 327 1 8 675 261 329 14 0 chrX 11816647 11816720 -154833576 - LTR75 LTR ERVL -487 75 2 8 675 359 21 21 0 chrX 11816845 11816893 -154833403 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 675 467 208 31 0 chrX 11816939 11817035 -154833261 + PB1D9 SINE Alu 22 120 0 8 675 272 347 20 0 chrX 11817082 11817180 -154833116 + PB1D10 SINE Alu 6 105 -12 8 675 288 111 0 0 chrX 11817182 11817227 -154833069 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 8 675 393 371 13 38 chrX 11817233 11817390 -154832906 + RSINE1 SINE B4 3 155 -10 8 675 22 0 0 0 chrX 11817416 11817438 -154832858 + AT_rich Low_complexity Low_complexity 1 22 0 8 675 472 260 10 0 chrX 11817442 11817542 -154832754 + ID_B1 SINE B4 117 217 -7 8 675 216 182 68 0 chrX 11817504 11817548 -154832748 + PB1D7 SINE Alu 73 119 -1 8 675 240 224 92 0 chrX 11817786 11817862 -154832434 - L1M LINE L1 -821 5419 5337 8 675 364 270 8 51 chrX 11818054 11818171 -154832125 - MER102b DNA MER1_type -111 230 119 8 675 396 0 0 0 chrX 11818181 11818225 -154832071 + (TTTC)n Simple_repeat Simple_repeat 3 46 0 8 675 943 216 20 15 chrX 11818226 11818428 -154831868 - ID_B1 SINE B4 -8 216 14 8 675 405 0 0 0 chrX 11818597 11818642 -154831654 + (TC)n Simple_repeat Simple_repeat 2 46 0 8 675 181 0 0 65 chrX 11819491 11819522 -154830774 + (CCCCCA)n Simple_repeat Simple_repeat 5 33 0 8 675 542 227 0 52 chrX 11819533 11819649 -154830647 + B4A SINE B4 115 224 -68 8 675 598 234 29 0 chrX 11819699 11819836 -154830460 + B1_Mur1 SINE Alu 1 141 -8 8 675 225 281 0 86 chrX 11819857 11819927 -154830369 + B4A SINE B4 223 286 -6 8 675 582 247 32 26 chrX 11819983 11820137 -154830159 + ID_B1 SINE B4 2 156 -68 8 675 752 207 7 7 chrX 11820139 11820280 -154830016 + B1_Mur2 SINE Alu 1 141 -8 8 675 880 190 8 0 chrX 11820540 11820794 -154829502 + (TG)n Simple_repeat Simple_repeat 1 256 0 8 675 470 257 58 168 chrX 11821277 11821586 -154828710 + ORR1E LTR MaLR 53 327 -32 8 675 1708 138 79 117 chrX 11821808 11822131 -154828165 + ORR1C1 LTR MaLR 1 336 -42 8 675 1224 49 0 0 chrX 11822131 11822275 -154828021 + B1_Mus2 SINE Alu 1 144 -3 8 675 1708 138 79 117 chrX 11822275 11822344 -154827952 + ORR1C1 LTR MaLR 337 378 0 8 675 23 33 0 0 chrX 11822450 11822480 -154827816 + AT_rich Low_complexity Low_complexity 1 30 0 8 675 2182 35 4 0 chrX 11822496 11822756 -154827540 - RLTR10-int LTR ERVK -1686 301 41 8 675 789 133 56 0 chrX 11822762 11822905 -154827391 - RLTR10 LTR ERVK -13 377 227 8 675 2252 76 22 6 chrX 11822989 11823305 -154826991 - RLTR10 LTR ERVK -69 321 1 8 675 1244 40 0 0 chrX 11823305 11823454 -154826842 - B2_Mm2 SINE B2 -46 149 1 8 675 857 236 68 80 chrX 11823454 11823601 -154826695 - B4 SINE B4 -62 230 89 8 675 357 24 0 0 chrX 11823601 11823643 -154826653 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 675 857 236 68 80 chrX 11823643 11823727 -154826569 - B4 SINE B4 -204 88 2 8 675 202 204 36 36 chrX 11823745 11823801 -154826495 - MIRc SINE MIR -105 163 108 8 675 343 339 111 6 chrX 11823814 11823986 -154826310 - MLT1H2 LTR MaLR -7 482 293 8 675 444 270 59 26 chrX 11824097 11824249 -154826047 - RSINE1 SINE B4 -7 158 2 8 675 252 291 214 71 chrX 11824271 11824467 -154825829 - MLT1H2 LTR MaLR -253 236 13 8 675 286 341 0 0 chrX 11824477 11824568 -154825728 - MIRb SINE MIR -155 113 23 8 675 668 238 37 18 chrX 11825018 11825181 -154825115 - B3 SINE B2 -28 188 23 8 675 272 283 44 62 chrX 11825300 11825413 -154824883 - ID_B1 SINE B4 -1 223 113 8 675 224 267 33 16 chrX 11825430 11825491 -154824805 - B3 SINE B2 -154 62 1 8 675 610 247 89 8 chrX 11825690 11825865 -154824431 - B3 SINE B2 0 198 23 8 675 200 297 13 46 chrX 11825872 11826024 -154824272 + CT-rich Low_complexity Low_complexity 1 147 0 8 675 224 302 16 0 chrX 11826179 11826242 -154824054 - ID SINE ID -160 64 1 8 675 658 204 13 37 chrX 11826242 11826385 -154823911 - ID_B1 SINE B4 -68 224 86 8 675 602 226 62 6 chrX 11826533 11826693 -154823603 - MLT1N2 LTR MaLR -2 560 392 8 675 371 282 101 36 chrX 11827254 11827429 -154822867 + MIRb SINE MIR 5 186 -22 8 675 268 343 36 36 chrX 11827432 11827571 -154822725 + MLT1N2 LTR MaLR 77 215 -347 8 675 418 296 21 72 chrX 11827454 11827647 -154822649 + LTR33B LTR ERVL 71 253 -250 8 675 367 280 33 17 chrX 11827893 11828013 -154822283 + MLT1N2 LTR MaLR 436 557 -5 8 675 342 0 0 0 chrX 11828744 11828782 -154821514 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 675 279 0 0 0 chrX 11829333 11829364 -154820932 + (T)n Simple_repeat Simple_repeat 1 31 0 8 675 198 0 0 0 chrX 11829534 11829556 -154820740 + (A)n Simple_repeat Simple_repeat 1 22 0 8 675 223 258 0 31 chrX 11830137 11830201 -154820095 + G-rich Low_complexity Low_complexity 2 63 0 8 675 345 100 0 0 chrX 11830741 11830791 -154819505 + (GAAA)n Simple_repeat Simple_repeat 3 52 0 8 675 515 252 80 51 chrX 11830791 11830929 -154819367 + RSINE1 SINE B4 24 165 0 8 675 667 152 327 6 chrX 11830943 11831102 -154819194 - B3 SINE B2 -6 210 1 8 675 1213 41 0 7 chrX 11831138 11831286 -154819010 + B1_Mus2 SINE Alu 1 147 0 8 675 705 191 57 35 chrX 11831587 11831728 -154818568 - B1F SINE Alu 0 149 6 8 675 366 246 69 52 chrX 11831753 11831869 -154818427 - B3A SINE B2 -80 118 1 8 675 2072 35 19 15 chrX 11831881 11832227 -154818069 - L1Md_F3 LINE L1 0 6584 6323 8 675 530 305 9 75 chrX 11832262 11832475 -154817821 - MLT1F2 LTR MaLR -4 556 358 8 675 251 302 10 40 chrX 11832626 11832726 -154817570 - B3 SINE B2 -2 214 118 8 675 195 42 0 0 chrX 11832766 11832790 -154817506 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 8 675 513 220 118 29 chrX 11832795 11832931 -154817365 - B3 SINE B2 -7 209 62 8 675 235 264 27 14 chrX 11832997 11833070 -154817226 + Charlie1b DNA MER1_type 449 522 -1 8 675 203 170 21 0 chrX 11833125 11833172 -154817124 + (TCCA)n Simple_repeat Simple_repeat 1 48 0 9 675 269 89 22 0 chrX 11833196 11833241 -154817055 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 9 675 525 248 35 35 chrX 11833278 11833391 -154816905 - B1_Mur1 SINE Alu -36 113 1 9 675 189 154 0 0 chrX 11834781 11834820 -154815476 + CT-rich Low_complexity Low_complexity 1 39 0 9 675 676 276 126 46 chrX 11834820 11835082 -154815214 - B4A SINE B4 0 292 10 9 675 378 0 0 0 chrX 11835114 11835156 -154815140 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 9 675 216 0 0 0 chrX 11835156 11835180 -154815116 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 675 598 234 8 15 chrX 11835181 11835311 -154814985 - RSINE1 SINE B4 -34 131 3 9 675 287 147 45 157 chrX 11835520 11835609 -154814687 - PB1D9 SINE Alu -2 118 40 9 675 339 271 136 0 chrX 11835857 11835950 -154814346 - PB1D7 SINE Alu -12 108 1 9 675 258 167 0 0 chrX 11835954 11835996 -154814300 - MER5B DNA MER1_type -14 164 123 9 675 483 63 0 0 chrX 11836395 11836458 -154813838 + (TTTC)n Simple_repeat Simple_repeat 2 64 0 9 675 1119 29 0 21 chrX 11836463 11836605 -154813691 - B1_Mus2 SINE Alu 0 147 9 9 675 560 216 38 132 chrX 11836468 11836681 -154813615 - B4 SINE B4 -71 221 29 9 675 451 204 85 28 chrX 11837013 11837119 -154813177 - PB1D7 SINE Alu -8 112 1 9 675 554 178 20 7 chrX 11837656 11837770 -154812526 + B1_Mur3 SINE Alu 1 111 -9 9 675 307 317 124 32 chrX 11838025 11838211 -154812085 + MER3 DNA MER1_type 1 203 -6 9 675 414 318 57 38 chrX 11838290 11838447 -154811849 - MER110 LTR ERV1 -21 470 311 9 675 319 384 71 15 chrX 11838523 11838676 -154811620 - MER110 LTR ERV1 -161 330 170 9 675 234 0 0 0 chrX 11838676 11838702 -154811594 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 9 675 319 384 71 15 chrX 11838702 11838744 -154811552 - MER110 LTR ERV1 -322 169 124 9 675 212 143 0 23 chrX 11838744 11838787 -154811509 + CT-rich Low_complexity Low_complexity 1 42 0 9 675 266 256 99 11 chrX 11838790 11838881 -154811415 - ID_B1 SINE B4 -1 223 125 9 675 488 262 0 0 chrX 11838993 11839096 -154811200 + B1_Mur3 SINE Alu 25 127 -22 9 675 228 342 63 0 chrX 11839237 11839316 -154810980 - MLT1G LTR MaLR -438 153 70 9 675 942 242 179 43 chrX 11839458 11839760 -154810536 + MLT1A0 LTR MaLR 2 344 -21 9 675 184 337 170 12 chrX 11839846 11840017 -154810279 + MIR SINE MIR 64 261 -1 9 675 180 0 0 0 chrX 11840029 11840049 -154810247 + (TG)n Simple_repeat Simple_repeat 2 21 0 9 675 757 193 7 0 chrX 11840142 11840287 -154810009 - B1_Mur4 SINE Alu 0 150 5 9 675 823 175 0 53 chrX 11840332 11840483 -154809813 - B1_Mur2 SINE Alu -5 144 2 9 675 770 230 79 14 chrX 11840484 11840700 -154809596 - B4A SINE B4 -62 230 1 9 675 361 256 13 0 chrX 11840731 11840809 -154809487 - ID4_ SINE ID -3 80 2 9 675 365 314 74 124 chrX 11840884 11841167 -154809129 - MLT1F LTR MaLR -1 547 279 9 675 534 281 33 8 chrX 11841324 11841446 -154808850 - RSINE1 SINE B4 -37 128 4 9 675 445 265 135 58 chrX 11841777 11842037 -154808259 + B4 SINE B4 1 280 -12 9 675 234 0 0 0 chrX 11842056 11842082 -154808214 + (CA)n Simple_repeat Simple_repeat 1 26 0 9 675 1807 141 96 121 chrX 11842084 11842271 -154808025 + MTC LTR MaLR 4 204 -217 9 675 676 77 0 0 chrX 11842271 11842362 -154807934 + 4.5SRNA scRNA scRNA 1 91 -3 9 675 1137 75 0 13 chrX 11842363 11842512 -154807784 + B1_Mus2 SINE Alu 1 147 0 9 675 1807 141 96 121 chrX 11842512 11842751 -154807545 + MTC LTR MaLR 205 421 0 9 675 304 279 0 0 chrX 11843433 11843501 -154806795 + PB1D10 SINE Alu 40 107 -10 9 675 438 151 8 178 chrX 11843795 11843924 -154806372 + MT2B LTR ERVL 158 264 -337 9 675 1079 31 8 0 chrX 11843828 11843958 -154806338 + B1_Mus1 SINE Alu 18 148 0 9 675 44 0 0 0 chrX 11844032 11844076 -154806220 + AT_rich Low_complexity Low_complexity 1 44 0 9 675 432 308 0 57 chrX 11844090 11844231 -154806065 - RSINE1 SINE B4 -32 133 1 9 675 439 323 24 0 chrX 11844237 11844361 -154805935 - ID_B1 SINE B4 -6 218 92 9 675 2804 100 64 24 chrX 11844560 11845011 -154805285 - Lx LINE L1 -4 6650 6182 9 675 13617 72 11 9 chrX 11845011 11847741 -154802555 - L1VL2 LINE L1 -721 2894 157 9 675 662 212 5 162 chrX 11848637 11848771 -154801525 + RSINE1 SINE B4 4 110 -55 9 675 1172 48 0 26 chrX 11848771 11848922 -154801374 + B1_Mus1 SINE Alu 2 148 0 9 675 662 212 5 162 chrX 11848922 11848978 -154801318 + RSINE1 SINE B4 111 164 -1 9 675 334 294 62 16 chrX 11849070 11849198 -154801098 + MER5A1 DNA MER1_type 1 134 -32 9 675 535 244 0 25 chrX 11849291 11849409 -154800887 + PB1D7 SINE Alu 6 120 0 9 675 626 245 27 13 chrX 11849857 11850006 -154800290 + RSINE1 SINE B4 3 153 -12 9 675 400 302 8 0 chrX 11850018 11850137 -154800159 + (CA)n Simple_repeat Simple_repeat 1 120 0 9 675 388 240 69 27 chrX 11850174 11850370 -154799926 - LTR37A LTR ERV1 -44 424 213 9 675 678 25 0 0 chrX 11851173 11851253 -154799043 + (TG)n Simple_repeat Simple_repeat 1 80 0 9 675 885 255 54 65 chrX 11851416 11851693 -154798603 - B4A SINE B4 -18 274 1 9 675 1231 260 129 5 chrX 11851824 11852195 -154798101 + MTD LTR MaLR 1 417 -2 9 675 21 36 0 0 chrX 11852209 11852237 -154798059 + AT_rich Low_complexity Low_complexity 1 28 0 9 675 778 274 19 5 chrX 11852239 11852448 -154797848 - B3 SINE B2 -3 213 2 9 675 557 196 10 0 chrX 11852457 11852554 -154797742 - ID_B1 SINE B4 -6 218 121 9 675 461 261 22 0 chrX 11852571 11852663 -154797633 + ID_B1 SINE B4 45 138 -86 9 675 329 206 0 16 chrX 11852770 11852834 -154797462 + ID4_ SINE ID 4 66 -17 9 675 874 302 43 94 chrX 11853152 11853544 -154796752 - RMER5 LTR ERV1 0 534 163 9 675 2749 129 174 20 chrX 11853544 11854051 -154796245 - RMER4B LTR ERVK 0 585 1 9 675 874 302 43 94 chrX 11854051 11854074 -154796222 - RMER5 LTR ERV1 -372 162 140 9 675 1557 181 114 68 chrX 11854136 11854503 -154795793 + ORR1C2 LTR MaLR 1 384 0 9 675 25 0 0 0 chrX 11854883 11854908 -154795388 + AT_rich Low_complexity Low_complexity 1 25 0 9 675 263 28 0 27 chrX 11855000 11855037 -154795259 + (CAA)n Simple_repeat Simple_repeat 1 36 0 9 675 303 130 0 18 chrX 11855204 11855259 -154795037 + B1_Mur4 SINE Alu 96 149 -1 9 675 494 302 26 65 chrX 11855308 11855555 -154794741 + MLT1H1 LTR MaLR 62 287 -292 9 675 1330 183 4 4 chrX 11855924 11856149 -154794147 + URR1B DNA MER1_type 1 225 0 9 675 398 267 199 15 chrX 11856155 11856378 -154793918 + MLT1H1 LTR MaLR 276 551 -28 9 675 235 184 0 44 chrX 11856414 11856466 -154793830 - B1F SINE Alu -13 136 62 9 675 236 267 126 19 chrX 11856490 11856593 -154793703 - PB1 SINE Alu -2 125 12 9 675 272 314 76 25 chrX 11856605 11856762 -154793534 - LTR33A LTR ERVL -40 480 316 9 675 294 162 0 0 chrX 11856778 11856852 -154793444 + (TTGG)n Simple_repeat Simple_repeat 2 75 0 9 675 1060 144 0 0 chrX 11856861 11857007 -154793289 - B1_Mur3 SINE Alu -1 148 3 9 675 393 303 73 60 chrX 11857054 11857205 -154793091 - LTR33A LTR ERVL -279 241 89 9 675 1221 190 95 0 chrX 11857344 11857576 -154792720 + MTD LTR MaLR 1 254 -165 9 675 323 228 267 0 chrX 11857699 11857800 -154792496 + MLT1G3 LTR MaLR 386 520 -75 9 675 1403 184 136 159 chrX 11858209 11858538 -154791758 + MTD LTR MaLR 3 299 -120 9 675 1121 75 0 20 chrX 11858538 11858688 -154791608 - B1_Mus1 SINE Alu 0 148 2 9 675 1403 184 136 159 chrX 11858688 11858785 -154791511 + MTD LTR MaLR 300 419 0 9 675 489 110 0 0 chrX 11858806 11858879 -154791417 + (TCCC)n Simple_repeat Simple_repeat 1 73 0 9 675 314 297 0 0 chrX 11858962 11859036 -154791260 - ID2 SINE ID -6 77 4 9 675 21 0 0 0 chrX 11859059 11859080 -154791216 + AT_rich Low_complexity Low_complexity 1 21 0 9 675 1447 203 36 17 chrX 11859186 11859603 -154790693 + MT2A LTR ERVL 18 490 -43 9 675 506 298 46 0 chrX 11860184 11860225 -154790071 - RSINE1 SINE B4 -26 139 94 9 675 207 0 0 0 chrX 11860225 11860248 -154790048 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 675 506 298 46 0 chrX 11860248 11860337 -154789959 - RSINE1 SINE B4 -72 93 4 9 675 353 289 50 45 chrX 11860565 11860734 -154789562 - MER115 DNA Tip100 -8 685 505 9 675 410 268 47 39 chrX 11860966 11861094 -154789202 + MLT1A1 LTR MaLR 23 151 -214 9 675 376 281 174 30 chrX 11861117 11861249 -154789047 + RSINE1 SINE B4 13 163 -2 9 675 423 277 7 93 chrX 11861383 11861534 -154788762 + MLT1A1 LTR MaLR 263 400 -8 9 675 339 312 27 0 chrX 11861720 11861832 -154788464 - PB1D10 SINE Alu -1 116 2 9 675 230 342 118 20 chrX 11861985 11862137 -154788159 + MamRep38 DNA hAT 97 263 -32 9 675 233 0 62 0 chrX 11862346 11862378 -154787918 + (CCCCCA)n Simple_repeat Simple_repeat 2 35 0 9 675 495 48 0 0 chrX 11862804 11862866 -154787430 + (TTC)n Simple_repeat Simple_repeat 2 63 0 9 675 1443 51 0 11 chrX 11862868 11863048 -154787248 - B2_Mm2 SINE B2 -15 180 3 9 675 196 217 30 91 chrX 11864489 11864555 -154785741 + MIR3 SINE MIR 102 163 -45 9 675 180 200 0 0 chrX 11865174 11865224 -154785072 + A-rich Low_complexity Low_complexity 1 50 0 9 675 270 0 0 0 chrX 11865394 11865424 -154784872 + (T)n Simple_repeat Simple_repeat 1 30 0 9 675 472 200 137 0 chrX 11865838 11865933 -154784363 - B1_Mus1 SINE Alu -29 119 12 9 675 414 0 0 0 chrX 11865937 11865983 -154784313 + (CA)n Simple_repeat Simple_repeat 2 47 0 9 675 309 290 39 20 chrX 11865983 11866085 -154784211 - B1F SINE Alu -26 123 20 9 675 222 312 113 38 chrX 11866198 11866411 -154783885 - L2a LINE L2 -83 3343 3115 9 675 436 229 53 44 chrX 11866490 11866604 -154783692 - PB1D10 SINE Alu -1 116 2 9 675 321 26 0 0 chrX 11866750 11866788 -154783508 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 675 1555 179 218 5 chrX 11867264 11867668 -154782628 - RCHARR1 DNA MER1_type 0 974 485 9 675 226 257 182 39 chrX 11867735 11867812 -154782484 - RSINE1 SINE B4 -76 89 2 1 675 429 278 21 28 chrX 11867858 11868021 -154782275 + B4A SINE B4 12 233 -59 1 675 521 348 68 36 chrX 11868021 11868301 -154781995 + B4A SINE B4 3 291 -1 1 675 1334 267 69 3 chrX 11868407 11868753 -154781543 + ORR1D2 LTR MaLR 1 369 -1 1 675 354 23 0 0 chrX 11868794 11868837 -154781459 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 675 441 0 0 0 chrX 11868837 11868885 -154781411 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 675 792 224 64 16 chrX 11868890 11869258 -154781038 - RCHARR1 DNA MER1_type -492 482 6 9 675 1054 151 196 0 chrX 11869266 11869445 -154780851 + B3 SINE B2 3 216 0 1 675 225 154 0 0 chrX 11869446 11869485 -154780811 + (TATG)n Simple_repeat Simple_repeat 2 40 0 1 675 530 266 149 18 chrX 11869709 11869931 -154780365 + RMER15 LTR ERVL 311 561 -14 1 675 872 131 13 40 chrX 11870024 11870175 -154780121 + B1_Mus2 SINE Alu 1 147 0 1 675 559 248 80 31 chrX 11870881 11871043 -154779253 + MLT1G3 LTR MaLR 255 424 -171 1 675 529 258 52 52 chrX 11871113 11871305 -154778991 - B3A SINE B2 -4 194 3 1 675 430 277 13 93 chrX 11871310 11871461 -154778835 - ID_B1 SINE B4 0 224 86 1 675 245 279 33 44 chrX 11872455 11872545 -154777751 - MER34A LTR ERV1 -4 538 450 1 675 612 271 84 50 chrX 11872755 11872934 -154777362 + B3A SINE B2 1 185 -13 1 675 360 0 0 0 chrX 11872939 11872979 -154777317 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 675 420 20 0 0 chrX 11872979 11873027 -154777269 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 675 309 213 147 0 chrX 11873048 11873123 -154777173 - PB1 SINE Alu -21 106 21 1 675 358 216 33 22 chrX 11873263 11873353 -154776943 - MER34A LTR ERV1 -470 101 11 1 675 853 221 90 33 chrX 11874315 11874526 -154775770 + ID_B1 SINE B4 1 223 -1 1 675 204 40 0 0 chrX 11874957 11874982 -154775314 + (A)n Simple_repeat Simple_repeat 1 25 0 1 675 1062 98 7 0 chrX 11875095 11875238 -154775058 - B1_Mur4 SINE Alu -6 144 1 1 675 578 28 354 35 chrX 11875272 11875385 -154774911 - B2_Mm2 SINE B2 0 195 47 1 675 1386 79 23 0 chrX 11875412 11875589 -154774707 - B2_Mm2 SINE B2 -14 181 1 1 675 751 270 30 22 chrX 11876126 11876342 -154773954 - B3A SINE B2 -1 215 1 1 675 411 302 91 98 chrX 11876672 11876997 -154773299 - MLT1G LTR MaLR -28 527 202 1 675 283 338 112 26 chrX 11878110 11878262 -154772034 - MIR SINE MIR -41 221 57 1 675 485 274 126 0 chrX 11878338 11878473 -154771823 + RSINE1 SINE B4 2 153 -12 1 675 216 67 0 0 chrX 11878527 11878557 -154771739 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 1 675 1069 35 6 108 chrX 11879056 11879214 -154771082 + B1_Mm SINE Alu 1 142 -5 1 675 543 31 0 0 chrX 11879218 11879283 -154771013 + (GAAA)n Simple_repeat Simple_repeat 4 68 0 1 675 389 381 72 29 chrX 11879398 11879676 -154770620 + LTR16A1 LTR ERVL 24 313 -143 1 675 1220 65 0 0 chrX 11880057 11880210 -154770086 + B2_Mm2 SINE B2 2 154 -41 1 675 201 39 0 0 chrX 11880211 11880237 -154770059 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 1 675 1063 106 0 14 chrX 11880344 11880487 -154769809 + B1_Mus1 SINE Alu 1 141 -7 1 675 357 24 0 0 chrX 11880495 11880537 -154769759 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 1 675 21 0 0 0 chrX 11880543 11880564 -154769732 + AT_rich Low_complexity Low_complexity 1 21 0 1 675 585 248 60 0 chrX 11880571 11880704 -154769592 + B1_Mur2 SINE Alu 1 141 -8 1 675 378 225 12 0 chrX 11880747 11880827 -154769469 - B1_Mur1 SINE Alu -20 129 49 1 675 580 260 172 0 chrX 11880848 11881040 -154769256 - MTD LTR MaLR -1 418 194 1 675 725 263 16 31 chrX 11881108 11881300 -154768996 + B3 SINE B2 28 216 0 1 675 320 293 26 87 chrX 11881302 11881623 -154768673 - L1MEg LINE L1 -4709 1491 1225 1 675 899 234 78 126 chrX 11881679 11881761 -154768535 - MTE2b LTR MaLR -2 377 298 1 675 897 184 7 0 chrX 11881761 11881902 -154768394 + B1_Mur2 SINE Alu 2 143 -6 1 675 899 234 78 126 chrX 11881902 11882215 -154768081 - MTE2b LTR MaLR -82 297 1 1 675 2730 131 35 2 chrX 11882597 11883003 -154767293 + MTC LTR MaLR 1 419 -2 1 675 342 298 214 120 chrX 11884022 11884289 -154766007 + B4A SINE B4 1 292 0 1 675 213 39 0 0 chrX 11884313 11884339 -154765957 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 675 581 311 26 7 chrX 11884434 11884586 -154765710 + MLT1J LTR MaLR 70 224 -288 1 675 285 109 0 0 chrX 11884844 11884890 -154765406 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 675 765 274 90 55 chrX 11884909 11885164 -154765132 - B4A SINE B4 -1 291 28 1 675 263 282 10 141 chrX 11885162 11885188 -154765108 - PB1D10 SINE Alu -2 115 91 1 675 1160 139 6 0 chrX 11885188 11885360 -154764936 + B2_Mm1a SINE B2 2 174 -19 1 675 263 282 10 141 chrX 11885360 11885432 -154764864 - PB1D10 SINE Alu -27 90 30 1 675 950 200 16 5 chrX 11885527 11885718 -154764578 + B2_Mm2 SINE B2 1 193 -2 1 675 817 161 13 40 chrX 11886690 11886839 -154763457 - B1_Mus1 SINE Alu 0 148 4 1 675 275 361 130 43 chrX 11886955 11887140 -154763156 + LTR16C LTR ERVL 128 328 -161 1 675 307 167 0 143 chrX 11887202 11887286 -154763010 - B4A SINE B4 -4 288 217 1 675 498 33 0 0 chrX 11887286 11887346 -154762950 + (TCCCC)n Simple_repeat Simple_repeat 3 62 0 1 675 725 214 0 14 chrX 11887347 11887489 -154762807 - B1_Mur2 SINE Alu -5 144 5 1 675 499 308 62 7 chrX 11887533 11887677 -154762619 - RSINE1 SINE B4 -2 163 12 1 675 666 286 52 118 chrX 11887663 11887933 -154762363 - B4A SINE B4 -39 253 2 1 675 289 176 0 0 chrX 11888075 11888126 -154762170 - ID_B1 SINE B4 0 224 174 1 675 272 293 100 10 chrX 11888126 11888175 -154762121 - PB1D10 SINE Alu 0 117 9 1 675 416 339 126 66 chrX 11888445 11888793 -154761503 + LTR16A LTR ERVL 83 451 0 1 675 357 323 139 52 chrX 11888808 11888930 -154761366 - MLT2B1 LTR ERVL -7 560 435 1 675 378 0 0 0 chrX 11888930 11888972 -154761324 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 675 357 323 139 52 chrX 11888972 11889022 -154761274 - MLT2B1 LTR ERVL -133 434 374 1 675 465 229 13 149 chrX 11889117 11889271 -154761025 - MLT2B1 LTR ERVL -387 133 1 1 675 342 71 0 0 chrX 11890022 11890064 -154760232 - Lx2 LINE L1 -211 6786 6745 1 675 1343 109 12 57 chrX 11890034 11890273 -154760023 + Lx2 LINE L1 6484 6725 -333 1 675 487 259 231 0 chrX 11890297 11890518 -154759778 + B4A SINE B4 2 273 -19 1 675 462 120 0 0 chrX 11890526 11890601 -154759695 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 675 184 37 16 129 chrX 11890731 11890793 -154759503 + T-rich Low_complexity Low_complexity 4 58 0 1 675 582 285 39 100 chrX 11890795 11891025 -154759271 - B4A SINE B4 -68 224 9 1 675 1121 162 91 10 chrX 11891027 11891226 -154759070 + B3 SINE B2 1 215 -1 1 675 832 186 14 7 chrX 11891250 11891391 -154758905 - B1_Mur2 SINE Alu -7 142 1 1 675 810 257 17 6 chrX 11891898 11892078 -154758218 + B3A SINE B2 1 182 -16 1 675 468 123 0 0 chrX 11892133 11892206 -154758090 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 675 22 56 0 0 chrX 11892210 11892246 -154758050 + AT_rich Low_complexity Low_complexity 1 36 0 1 675 684 175 0 17 chrX 11892254 11892370 -154757926 + B1_Mur1 SINE Alu 33 146 -3 1 675 239 209 0 0 chrX 11892619 11892662 -154757634 - LTR82A LTR ERVL -10 862 820 1 675 300 326 24 82 chrX 11892680 11892887 -154757409 - LTR50 LTR ERVL -19 776 582 1 675 672 239 32 64 chrX 11893008 11893196 -154757100 + B3 SINE B2 31 212 -4 1 675 1130 63 14 0 chrX 11893220 11893362 -154756934 + B1_Mus1 SINE Alu 5 148 0 1 675 329 236 11 63 chrX 11893372 11893467 -154756829 - LTR82A LTR ERVL -578 294 205 1 675 913 244 0 24 chrX 11893561 11893767 -154756529 - B3 SINE B2 -12 204 4 1 675 393 216 44 22 chrX 11893838 11893928 -154756368 - B4 SINE B4 -38 254 163 1 675 887 264 70 95 chrX 11894408 11894716 -154755580 + MLT1A LTR MaLR 4 312 -62 1 675 2508 75 25 0 chrX 11894716 11895035 -154755261 + ORR1A2 LTR MaLR 1 327 0 1 675 887 264 70 95 chrX 11895035 11895095 -154755201 + MLT1A LTR MaLR 313 363 -11 1 675 1115 139 28 11 chrX 11895166 11895348 -154754948 + B2_Mm2 SINE B2 2 186 -9 1 675 438 241 66 22 chrX 11895397 11895533 -154754763 - B1F1 SINE Alu -6 143 2 1 675 312 304 111 7 chrX 11895545 11895806 -154754490 - L1ME2 LINE L1 -2 6177 5884 1 675 306 0 0 0 chrX 11895823 11895857 -154754439 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1 675 513 189 0 0 chrX 11895857 11895937 -154754359 - B1_Mur2 SINE Alu -11 138 59 1 675 355 224 148 16 chrX 11895949 11896122 -154754174 - RMER4B LTR ERVK -11 574 344 1 675 210 163 0 23 chrX 11896137 11896181 -154754115 + (CAG)n Simple_repeat Simple_repeat 1 43 0 1 675 199 206 14 29 chrX 11896183 11896253 -154754043 + C-rich Low_complexity Low_complexity 3 71 0 1 675 1174 162 83 0 chrX 11896260 11896488 -154753808 - RMER4B LTR ERVK -322 263 17 1 675 296 212 15 29 chrX 11896487 11896555 -154753741 - PB1D9 SINE Alu -51 69 3 1 675 365 262 97 0 chrX 11896575 11896678 -154753618 - L1ME2 LINE L1 -304 5860 5748 1 675 806 155 41 21 chrX 11896731 11896876 -154753420 - B1_Mur3 SINE Alu 0 149 2 1 675 982 233 70 37 chrX 11897565 11897837 -154752459 - MTEb LTR MaLR -16 363 83 1 675 373 218 140 4 chrX 11897885 11897976 -154752320 - MTEb LTR MaLR -276 103 3 1 675 180 0 0 0 chrX 11898087 11898107 -154752189 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1 675 896 228 9 41 chrX 11898121 11898161 -154752135 + B3 SINE B2 2 39 -177 1 675 1665 42 0 0 chrX 11898161 11898353 -154751943 + B2_Mm1t SINE B2 2 193 0 1 675 896 228 9 41 chrX 11898353 11898532 -154751764 + B3 SINE B2 40 214 -2 1 675 314 256 111 0 chrX 11898687 11898777 -154751519 - PB1D10 SINE Alu -17 100 1 1 675 951 26 0 0 chrX 11898798 11898912 -154751384 + (TC)n Simple_repeat Simple_repeat 1 114 0 1 675 243 0 0 0 chrX 11899058 11899085 -154751211 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 675 800 188 0 0 chrX 11899125 11899253 -154751043 - B3 SINE B2 -86 130 3 1 675 818 291 75 36 chrX 11899304 11899585 -154750711 - B4A SINE B4 0 292 1 1 675 542 281 1 12 chrX 11900042 11900188 -154750108 + MTE2a LTR MaLR 1 143 -236 1 675 1057 134 0 7 chrX 11900211 11900361 -154749935 - B1_Mur4 SINE Alu 0 150 2 1 675 493 218 0 0 chrX 11900398 11900485 -154749811 + RSINE1 SINE B4 11 97 -68 1 675 4876 146 31 6 chrX 11900573 11901367 -154748929 + RLTR40 LTR ERVK 1 814 -3 1 675 361 305 94 9 chrX 11901911 11902017 -154748279 - RSINE1 SINE B4 -19 146 32 1 675 287 287 132 71 chrX 11902077 11902111 -154748185 + YREP_Mm Unknown Unknown 127 191 -1621 1 675 1042 89 7 20 chrX 11902111 11902260 -154748036 - B1_Mur3 SINE Alu 0 149 3 1 675 287 287 132 71 chrX 11902260 11902403 -154747893 + YREP_Mm Unknown Unknown 192 472 -1340 1 675 251 213 31 62 chrX 11902457 11902522 -154747774 - LTR50 LTR ERVL -568 227 165 1 675 213 39 0 0 chrX 11902807 11902833 -154747463 + (TGG)n Simple_repeat Simple_repeat 3 28 0 1 675 1008 293 74 28 chrX 11903054 11903444 -154746852 - LTR16A LTR ERVL 0 451 44 1 675 640 165 49 16 chrX 11903578 11903655 -154746641 + B4 SINE B4 3 83 -209 1 675 235 218 0 68 chrX 11903655 11903714 -154746582 + B1F SINE Alu 1 55 -94 1 675 249 260 0 0 chrX 11903722 11903772 -154746524 + B4 SINE B4 229 278 -14 1 675 701 92 8 0 chrX 11903773 11903893 -154746403 + (CA)n Simple_repeat Simple_repeat 2 122 0 1 675 353 276 31 0 chrX 11904101 11904199 -154746097 - RMER15 LTR ERVL -43 532 432 1 675 311 344 81 70 chrX 11904221 11904393 -154745903 - Lx8 LINE L1 -245 7228 7055 1 675 477 212 0 0 chrX 11904949 11905034 -154745262 - B4 SINE B4 -206 86 2 1 675 204 228 0 0 chrX 11905186 11905243 -154745053 + CT-rich Low_complexity Low_complexity 2 58 0 1 675 1275 78 44 11 chrX 11905276 11905297 -154744999 - B2_Mm2 SINE B2 -8 187 159 1 675 207 0 0 0 chrX 11905297 11905320 -154744976 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1 675 1275 78 44 11 chrX 11905320 11905479 -154744817 - B2_Mm2 SINE B2 -37 158 1 1 675 346 213 40 0 chrX 11905508 11905583 -154744713 - MTD LTR MaLR -1 418 341 1 675 261 0 0 0 chrX 11905600 11905629 -154744667 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1 675 320 91 23 0 chrX 11905709 11905753 -154744543 - MTD LTR MaLR -263 156 112 1 675 263 211 124 21 chrX 11905762 11905859 -154744437 - L1M4 LINE L1 -2727 3917 3811 1 675 655 215 23 8 chrX 11905952 11906097 -154744199 - B1F SINE Alu 0 149 3 1 675 303 306 31 69 chrX 11905983 11906113 -154744183 - B4 SINE B4 -90 202 78 1 675 297 302 14 87 chrX 11905989 11906127 -154744169 - MT2B2 LTR ERVL -321 263 136 1 675 1034 280 88 57 chrX 11906252 11906289 -154744007 + MTEa LTR MaLR 15 51 -328 1 675 1269 109 16 16 chrX 11906289 11906476 -154743820 + B2_Mm2 SINE B2 1 187 -8 1 675 1034 280 88 57 chrX 11906476 11906790 -154743506 + MTEa LTR MaLR 52 377 -2 1 675 1195 155 6 0 chrX 11906833 11907014 -154743282 - URR1B DNA MER1_type -43 182 1 1 675 330 129 43 0 chrX 11907051 11907144 -154743152 + T-rich Low_complexity Low_complexity 1 97 0 1 675 346 252 73 132 chrX 11907181 11907209 -154743087 + MT2B LTR ERVL 135 153 -448 1 675 669 257 7 7 chrX 11907209 11907354 -154742942 + B1_Mur1 SINE Alu 1 145 -4 1 675 243 79 0 0 chrX 11907356 11907394 -154742902 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 1 675 330 247 119 147 chrX 11907801 11907947 -154742349 - Lx7 LINE L1 -6 7690 7573 1 675 700 192 0 0 chrX 11907947 11908067 -154742229 - PB1D9 SINE Alu 0 120 1 1 675 330 247 119 147 chrX 11908067 11908208 -154742088 - Lx7 LINE L1 -124 7572 7425 1 675 913 134 0 27 chrX 11908208 11908354 -154741942 + B1_Mus2 SINE Alu 5 146 -1 1 675 330 247 119 147 chrX 11908354 11908596 -154741700 - Lx7 LINE L1 -272 7424 7175 1 675 478 219 32 52 chrX 11908602 11908756 -154741540 - RCHARR1 DNA MER1_type 0 974 824 1 675 829 278 42 21 chrX 11908978 11909451 -154740845 - L1M4 LINE L1 -3785 2859 2379 1 675 277 247 35 58 chrX 11909468 11909554 -154740742 + B1F1 SINE Alu 1 84 -65 1 675 471 243 0 26 chrX 11909583 11909697 -154740599 - PB1D10 SINE Alu -6 111 1 1 675 562 315 72 41 chrX 11910597 11910888 -154739408 - L1M4 LINE L1 -5803 739 440 1 675 348 268 0 0 chrX 11910945 11911027 -154739269 + ID4 SINE ID 2 83 0 1 675 1704 236 79 41 chrX 11911103 11911637 -154738659 + Lx8 LINE L1 6918 7471 -2 1 675 1036 110 7 0 chrX 11911817 11911962 -154738334 - B1_Mus1 SINE Alu 0 148 3 1 675 385 339 58 48 chrX 11911969 11912263 -154738033 + L1ME3A LINE L1 4643 4939 -1207 1 675 6287 105 64 1 chrX 11912821 11913785 -154736511 + Lx2 LINE L1 5973 6997 0 1 675 474 272 136 54 chrX 11913870 11914372 -154735924 + L1ME3A LINE L1 5103 5639 -534 1 675 312 307 30 30 chrX 11914422 11914590 -154735706 + L1ME3A LINE L1 5780 5947 -226 1 675 1047 76 0 40 chrX 11914591 11914742 -154735554 + B1_Mus1 SINE Alu 1 145 -3 1 675 369 0 0 0 chrX 11914742 11914783 -154735513 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 1 675 387 41 0 0 chrX 11914914 11914963 -154735333 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 675 549 291 7 90 chrX 11914979 11915134 -154735162 - RSINE1 SINE B4 -17 148 7 1 675 267 239 254 44 chrX 11915191 11915305 -154734991 + RSINE1 SINE B4 15 152 -13 1 675 274 271 15 92 chrX 11915752 11915818 -154734478 - L1MB7 LINE L1 -2 6181 6122 1 675 2354 65 69 0 chrX 11915818 11916124 -154734172 + ORR1A2 LTR MaLR 1 327 0 1 675 274 271 15 92 chrX 11916124 11916187 -154734109 - L1MB7 LINE L1 -62 6121 6062 1 675 646 279 39 3 chrX 11916199 11916355 -154733941 - ID_B1 SINE B4 -46 246 80 1 675 623 266 18 27 chrX 11916355 11916576 -154733720 - L1MB7 LINE L1 -122 6061 5841 1 675 213 39 0 0 chrX 11916578 11916604 -154733692 + (TCTG)n Simple_repeat Simple_repeat 1 26 0 1 675 402 242 22 0 chrX 11916678 11916769 -154733527 + RSINE1 SINE B4 3 95 -70 1 675 248 327 0 0 chrX 11916767 11916819 -154733477 + RSINE1 SINE B4 53 104 -61 1 675 305 334 78 8 chrX 11917040 11917208 -154733088 - L1MB7 LINE L1 -308 5872 5684 1 675 213 65 0 0 chrX 11917208 11917239 -154733057 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 675 299 335 107 17 chrX 11917239 11917304 -154732992 - L1MB7 LINE L1 -497 5683 5618 1 675 572 229 34 8 chrX 11917607 11917726 -154732570 - ID_B1 SINE B4 -15 209 88 1 675 421 300 205 43 chrX 11917735 11918473 -154731823 - L2 LINE L2 -1613 1806 950 1 675 196 224 15 15 chrX 11919167 11919235 -154731061 + CT-rich Low_complexity Low_complexity 2 69 0 1 675 231 125 0 0 chrX 11919485 11919525 -154730771 + (TTCA)n Simple_repeat Simple_repeat 3 42 0 1 675 749 206 235 0 chrX 11919758 11919928 -154730368 + B3 SINE B2 1 210 -6 1 675 804 281 5 40 chrX 11919948 11920078 -154730218 + ID_B1 SINE B4 32 162 -62 1 675 1420 243 70 18 chrX 11920078 11920476 -154729820 - MTD LTR MaLR 0 419 1 1 675 804 281 5 40 chrX 11920476 11920545 -154729751 + ID_B1 SINE B4 163 223 -1 1 675 1350 61 61 0 chrX 11920557 11920738 -154729558 + B2_Mm2 SINE B2 1 192 -3 1 675 1211 48 7 0 chrX 11920743 11920888 -154729408 + B1_Mus2 SINE Alu 1 146 -1 1 675 363 283 7 42 chrX 11920915 11920957 -154729339 - Tigger5 DNA MER2_type -86 2320 2279 1 675 1930 112 104 21 chrX 11920957 11921284 -154729012 - L1_Mus4 LINE L1 -5 6631 6278 1 675 363 283 7 42 chrX 11921284 11921385 -154728911 - Tigger5 DNA MER2_type -128 2278 2183 1 675 584 129 3 35 chrX 11921376 11921415 -154728881 - B1_Mus1 SINE Alu -15 102 2 1 675 352 231 39 108 chrX 11921415 11921480 -154728816 - B4A SINE B4 -142 150 91 1 675 1535 67 0 5 chrX 11921480 11921675 -154728621 - B2_Mm2 SINE B2 -1 194 1 1 675 352 231 39 108 chrX 11921675 11921711 -154728585 - B4A SINE B4 -202 90 56 1 675 235 239 126 80 chrX 11921740 11921846 -154728450 + PB1D7 SINE Alu 22 149 0 1 675 281 264 65 112 chrX 11922401 11922574 -154727722 + MIR SINE MIR 29 196 -72 1 675 639 316 57 38 chrX 11922606 11922946 -154727350 - MER31A LTR ERV1 -4 462 108 1 675 244 306 28 0 chrX 11922946 11923018 -154727278 - ID2 SINE ID -8 75 2 1 675 639 299 35 38 chrX 11923018 11923094 -154727202 - MER31A LTR ERV1 -378 107 39 1 675 216 269 119 0 chrX 11923115 11923182 -154727114 + MER5A DNA MER1_type 2 76 -113 1 675 1122 74 0 0 chrX 11923182 11923330 -154726966 + B1_Mus1 SINE Alu 1 148 0 1 675 216 0 0 0 chrX 11923365 11923389 -154726907 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 675 1127 81 0 13 chrX 11923393 11923543 -154726753 - B1_Mus1 SINE Alu 0 148 1 1 675 334 217 40 80 chrX 11923548 11923673 -154726623 - L1M4b LINE L1 -5014 2320 2201 1 675 1062 103 7 0 chrX 11923743 11923889 -154726407 + B1_Mus1 SINE Alu 2 148 0 1 675 596 106 11 0 chrX 11923889 11923983 -154726313 + (GA)n Simple_repeat Simple_repeat 2 96 0 1 675 258 241 0 102 chrX 11923997 11924085 -154726211 + ID4 SINE ID 2 80 -3 1 675 225 292 68 34 chrX 11924277 11924394 -154725902 + MER5B DNA MER1_type 5 125 -53 1 675 286 298 48 0 chrX 11924471 11924555 -154725741 - MER5A1 DNA MER1_type -69 97 10 1 675 408 277 92 36 chrX 11925183 11925517 -154724779 - ORR1E LTR MaLR 0 408 1 1 675 1024 64 42 28 chrX 11925772 11925916 -154724380 - B1_Mm SINE Alu 0 147 2 1 675 888 285 94 34 chrX 11925989 11926309 -154723987 - MER2 DNA MER2_type 0 345 7 1 675 1742 159 20 5 chrX 11926644 11926967 -154723329 - ORR1C1 LTR MaLR 0 378 1 1 675 804 31 0 0 chrX 11927095 11927191 -154723105 + ORR1A3 LTR MaLR 231 326 0 1 676 378 0 0 0 chrX 11927902 11927944 -154722352 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 676 586 235 115 51 chrX 11927983 11928140 -154722156 - B4A SINE B4 -23 269 103 1 676 358 221 71 31 chrX 11928166 11928312 -154721984 - MIRb SINE MIR -23 185 48 1 676 693 223 94 9 chrX 11928352 11928528 -154721768 - B3 SINE B2 -10 206 7 1 676 262 319 126 25 chrX 11928520 11928639 -154721657 - MLT1B LTR MaLR -214 176 46 1 676 273 29 0 0 chrX 11928893 11928927 -154721369 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 676 868 226 18 0 chrX 11929231 11929399 -154720897 - B3A SINE B2 -18 180 10 1 676 213 182 43 43 chrX 11929561 11929607 -154720689 - ID4_ SINE ID -36 47 2 1 676 347 250 103 40 chrX 11929665 11929840 -154720456 - MER53 DNA hAT -4 189 4 1 676 285 169 0 0 chrX 11930287 11930346 -154719950 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 676 293 258 16 0 chrX 11930347 11930409 -154719887 - tRNA-Ala-GCY_ tRNA tRNA -11 64 2 1 676 884 322 123 42 chrX 11930414 11930942 -154719354 + MLT1E LTR MaLR 67 637 -16 1 676 218 143 0 163 chrX 11931068 11931160 -154719136 + A-rich Low_complexity Low_complexity 1 77 0 1 676 252 326 34 41 chrX 11932766 11932913 -154717383 + LTR77 LTR ERV1 438 583 -39 1 676 316 273 72 65 chrX 11932977 11933130 -154717166 + HAL1-3A_ME LINE L1 2284 2437 -421 1 676 348 263 13 13 chrX 11933130 11933288 -154717008 + GA-rich Low_complexity Low_complexity 1 158 0 1 676 318 304 106 19 chrX 11933301 11933462 -154716834 + MIR3 SINE MIR 33 207 -1 1 676 596 267 36 30 chrX 11934070 11934236 -154716060 - B3A SINE B2 -1 197 31 1 676 343 255 0 227 chrX 11934523 11934536 -154715760 - B4 SINE B4 -74 218 211 1 676 2315 110 9 0 chrX 11934536 11934862 -154715434 - ORR1A4 LTR MaLR 0 329 1 1 676 343 255 0 227 chrX 11934862 11934939 -154715357 - B4 SINE B4 -82 210 150 1 676 1730 39 17 4 chrX 11934939 11935171 -154715125 + L1_Mus3 LINE L1 6404 6638 0 1 676 663 167 18 164 chrX 11935171 11935244 -154715052 - B1_Mur2 SINE Alu -85 64 1 1 676 343 255 0 227 chrX 11935244 11935282 -154715014 - B4 SINE B4 -143 149 62 1 676 478 236 189 21 chrX 11935288 11935526 -154714770 - L1MC2 LINE L1 -275 6069 5792 1 676 318 295 56 127 chrX 11935579 11935978 -154714318 - ORR1E LTR MaLR 0 379 1 1 676 345 327 44 72 chrX 11936039 11936220 -154714076 + B3A SINE B2 5 180 -18 1 676 653 259 74 21 chrX 11936264 11936453 -154713843 + B4A SINE B4 92 290 -2 1 676 1416 75 0 21 chrX 11936666 11936857 -154713439 - B2_Mm2 SINE B2 -8 187 1 1 676 388 288 80 85 chrX 11937084 11937285 -154713011 - MLT1J1 LTR MaLR 0 444 245 1 676 397 323 10 0 chrX 11937286 11937385 -154712911 - MER81 DNA AcHobo -1 113 14 1 676 378 336 10 0 chrX 11937477 11937581 -154712715 - MLT1J1 LTR MaLR -333 111 7 1 676 568 243 187 19 chrX 11937711 11937866 -154712430 - B3A SINE B2 -16 182 2 1 676 214 186 0 48 chrX 11937866 11937928 -154712368 + T-rich Low_complexity Low_complexity 2 60 0 1 676 1164 174 99 38 chrX 11937995 11938287 -154712009 - RMER17C LTR ERVK -100 310 1 1 676 14649 124 87 62 chrX 11938287 11938635 -154711661 - RMER17C-int LTR ERVK 0 3238 2900 1 676 225 0 0 0 chrX 11938635 11938660 -154711636 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 676 14649 124 87 62 chrX 11938660 11938937 -154711359 - RMER17C-int LTR ERVK -339 2899 2608 1 676 256 222 0 36 chrX 11938937 11938993 -154711303 + LSU-rRNA_Hsa rRNA rRNA 4199 4252 -783 1 676 14649 124 87 62 chrX 11938993 11941096 -154709200 - RMER17C-int LTR ERVK -339 2607 387 1 676 1121 69 0 0 chrX 11941164 11941309 -154708987 - L1_Mus2 LINE L1 0 6566 6422 1 676 277 158 68 34 chrX 11941341 11941400 -154708896 - RMER17C-int LTR ERVK -3176 62 2 1 676 1230 159 48 25 chrX 11941400 11941716 -154708580 - RMER17C LTR ERVK 0 410 88 1 676 324 0 0 0 chrX 11941727 11941763 -154708533 + (TTCC)n Simple_repeat Simple_repeat 1 36 0 1 676 716 107 9 0 chrX 11941765 11941877 -154708419 + (TTC)n Simple_repeat Simple_repeat 3 115 0 1 676 877 131 0 42 chrX 11941880 11942023 -154708273 - B1_Mus1 SINE Alu -6 142 6 1 676 381 248 47 79 chrX 11941909 11942036 -154708260 - B4 SINE B4 -89 203 81 1 676 414 299 199 11 chrX 11942071 11942247 -154708049 - MLT1D LTR MaLR -2 503 295 1 676 716 283 28 51 chrX 11942269 11942485 -154707811 - MLT1D LTR MaLR -263 242 32 1 676 200 74 0 0 chrX 11942771 11942798 -154707498 - MIRb SINE MIR -221 47 21 1 676 182 192 19 0 chrX 11943451 11943503 -154706793 + CT-rich Low_complexity Low_complexity 2 54 0 1 676 780 257 49 122 chrX 11943503 11943707 -154706589 - B3 SINE B2 0 195 7 1 676 1348 282 25 38 chrX 11943702 11944070 -154706226 + MTEa LTR MaLR 13 375 -4 1 676 759 316 42 111 chrX 11944072 11944521 -154705775 - MLT1G3 LTR MaLR -177 418 1 1 676 444 257 10 19 chrX 11944594 11944697 -154705599 - RSINE1 SINE B4 -30 135 34 1 676 518 186 14 14 chrX 11944708 11944850 -154705446 + (TA)n Simple_repeat Simple_repeat 2 143 0 1 676 384 216 103 92 chrX 11944851 11945035 -154705261 - L1MCa LINE L1 -4548 1960 1775 1 676 408 346 57 77 chrX 11945190 11945556 -154704740 - ORR1E LTR MaLR 0 359 1 1 676 253 324 36 83 chrX 11945583 11945775 -154704521 - MTEa LTR MaLR 0 379 197 1 676 415 306 134 62 chrX 11946003 11946310 -154703986 - ORR1E LTR MaLR -20 339 11 1 676 254 330 103 54 chrX 11946317 11946692 -154703604 + MLT1H LTR MaLR 133 489 0 1 676 1348 190 117 66 chrX 11946747 11947097 -154703199 - ORR1D2 LTR MaLR 0 370 3 1 676 387 335 90 63 chrX 11947275 11947543 -154702753 - MLT1G3-int LTR MaLR -439 948 674 1 676 601 236 147 29 chrX 11947582 11947752 -154702544 - B3 SINE B2 -13 203 14 1 676 1055 283 93 23 chrX 11947948 11948302 -154701994 + MTD LTR MaLR 27 405 -14 1 676 234 324 57 0 chrX 11948965 11949070 -154701226 + LTR33C LTR ERVL 22 132 -497 1 676 245 313 53 38 chrX 11949087 11949220 -154701076 + MLT2F LTR ERVL 285 419 -244 1 676 711 196 133 48 chrX 11949310 11949498 -154700798 - B3 SINE B2 -12 204 1 1 676 1489 277 27 82 chrX 11949560 11950047 -154700249 + MLT1F1 LTR MaLR 110 569 0 1 676 912 117 0 0 chrX 11950280 11950425 -154699871 + (CA)n Simple_repeat Simple_repeat 2 146 0 1 676 592 249 30 12 chrX 11950447 11950614 -154699682 - MLT1A0 LTR MaLR -195 170 1 1 676 949 257 67 19 chrX 11951982 11952321 -154697975 - ORR1D2 LTR MaLR 0 359 1 1 676 611 256 58 13 chrX 11952383 11952537 -154697759 - MLT1A0 LTR MaLR -130 235 75 1 676 885 123 15 0 chrX 11952621 11952751 -154697545 - B1_Mus1 SINE Alu -16 132 1 1 676 404 261 69 8 chrX 11953517 11953648 -154696648 - B1F1 SINE Alu -10 139 1 1 676 724 195 0 8 chrX 11953982 11954106 -154696190 - B1_Mur3 SINE Alu -26 123 1 1 676 353 266 0 12 chrX 11954107 11954187 -154696109 - PB1D7 SINE Alu -21 99 21 1 676 4599 170 19 57 chrX 11954459 11955340 -154694956 - RMER19B LTR ERVK 0 902 55 1 676 657 238 14 7 chrX 11955340 11955488 -154694808 - RMER19B LTR ERVK -753 149 1 1 676 821 168 7 40 chrX 11955755 11955904 -154694392 + B1_Mus1 SINE Alu 1 144 -4 1 676 211 349 0 55 chrX 11956245 11956336 -154693960 - MIRc SINE MIR -86 182 97 1 676 379 359 112 14 chrX 11956360 11956575 -154693721 - MLT1J LTR MaLR -48 464 229 1 676 953 249 68 57 chrX 11956589 11956648 -154693648 + B4A SINE B4 1 53 -239 1 676 1953 144 157 6 chrX 11956648 11957011 -154693285 - MTC LTR MaLR -3 418 1 1 676 953 249 68 57 chrX 11957011 11957232 -154693064 + B4A SINE B4 54 284 -8 1 676 276 327 42 56 chrX 11957313 11957527 -154692769 - L3 LINE CR1 -175 4314 4104 1 676 277 340 20 20 chrX 11957604 11957706 -154692590 - MLT1J LTR MaLR -187 325 224 1 676 323 330 19 0 chrX 11957725 11957828 -154692468 + MIRb SINE MIR 86 190 -78 1 676 357 291 0 19 chrX 11958771 11958871 -154691425 + MLT1B LTR MaLR 74 171 -219 1 676 727 181 28 35 chrX 11958871 11959014 -154691282 + RSINE1 SINE B4 2 143 -22 1 676 412 216 71 43 chrX 11959054 11959194 -154691102 + MLT1B LTR MaLR 160 303 -87 1 676 702 167 0 0 chrX 11959506 11959620 -154690676 - B3A SINE B2 -84 114 1 1 676 561 222 87 22 chrX 11959674 11959812 -154690484 + RSINE1 SINE B4 2 148 -17 1 676 25 0 0 0 chrX 11959821 11959846 -154690450 + AT_rich Low_complexity Low_complexity 1 25 0 1 676 742 262 44 0 chrX 11959846 11960029 -154690267 - B3A SINE B2 -7 191 1 1 676 727 211 271 0 chrX 11960060 11960226 -154690070 - B3 SINE B2 -4 212 2 1 676 261 307 55 96 chrX 11960253 11960473 -154689823 - Arthur1 DNA Tip100 -103 3844 3634 1 676 546 273 92 20 chrX 11960483 11960636 -154689660 - B3A SINE B2 -33 165 2 1 676 1021 307 192 18 chrX 11960790 11960862 -154689434 - Arthur1 DNA Tip100 -2614 1333 1242 1 676 1225 55 0 0 chrX 11960862 11961008 -154689288 - B1_Mus1 SINE Alu -1 147 2 1 676 1021 307 192 18 chrX 11961008 11961671 -154688625 - Arthur1 DNA Tip100 -2706 1241 471 1 676 693 302 175 22 chrX 11961675 11961990 -154688306 + MLT1G3 LTR MaLR 3 365 -230 1 676 219 186 0 0 chrX 11962008 11962051 -154688245 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 676 393 22 0 0 chrX 11962055 11962101 -154688195 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 676 403 315 47 64 chrX 11962127 11962361 -154687935 - MTD LTR MaLR -189 230 1 1 676 248 244 0 0 chrX 11962361 11962406 -154687890 - Arthur1 DNA Tip100 -3900 47 3 1 676 332 260 38 19 chrX 11962446 11962552 -154687744 - MIR SINE MIR -43 219 112 1 676 23 0 0 0 chrX 11962999 11963022 -154687274 + AT_rich Low_complexity Low_complexity 1 23 0 1 676 246 216 39 0 chrX 11963025 11963076 -154687220 + MTE2b LTR MaLR 282 334 -45 1 676 331 267 72 88 chrX 11963058 11963086 -154687210 - B2_Mm2 SINE B2 -5 190 163 1 676 279 0 0 0 chrX 11963086 11963117 -154687179 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 676 729 226 9 3 chrX 11963117 11963269 -154687027 - B3A SINE B2 -33 162 13 1 676 387 0 0 0 chrX 11963269 11963312 -154686984 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 676 257 200 80 0 chrX 11963315 11963365 -154686931 + MTE2b LTR MaLR 326 379 0 1 676 589 301 94 25 chrX 11963498 11963652 -154686644 + MLT1F LTR MaLR 73 237 -311 1 676 1248 204 85 72 chrX 11963652 11964027 -154686269 - RLTR14 LTR ERV1 0 382 3 1 676 589 301 94 25 chrX 11964027 11964073 -154686223 + MLT1F LTR MaLR 238 287 -261 1 676 1681 147 4 8 chrX 11964073 11964333 -154685963 + RLTR14 LTR ERV1 1 259 -123 1 676 253 200 0 0 chrX 11964333 11964373 -154685923 + B1_Mus1 SINE Alu 1 40 -108 1 676 735 154 89 0 chrX 11964376 11964499 -154685797 + B1_Mus2 SINE Alu 14 147 0 1 676 225 0 0 0 chrX 11964499 11964524 -154685772 + (A)n Simple_repeat Simple_repeat 1 25 0 1 676 900 248 64 5 chrX 11965140 11965359 -154684937 + MER2 DNA MER2_type 1 232 -113 1 676 372 328 82 0 chrX 11965363 11965485 -154684811 + RSINE1 SINE B4 26 157 -8 1 676 320 272 9 80 chrX 11965546 11965658 -154684638 + MER2 DNA MER2_type 233 336 -9 1 676 654 219 0 0 chrX 11966195 11966314 -154683982 + RSINE1 SINE B4 11 129 -36 1 676 270 0 0 0 chrX 11966317 11966347 -154683949 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 676 487 265 105 8 chrX 11966371 11966504 -154683792 - RSINE1 SINE B4 -17 148 3 1 676 198 368 105 36 chrX 11966880 11967171 -154683125 - L2c LINE L2 -51 3324 3000 1 676 727 156 229 34 chrX 11967574 11967753 -154682543 - B3 SINE B2 -1 215 2 1 676 334 254 200 37 chrX 11967757 11967780 -154682516 - MER53 DNA hAT -36 157 136 1 676 712 248 0 0 chrX 11967780 11967929 -154682367 - B1F1 SINE Alu 0 149 1 1 676 334 254 200 37 chrX 11967929 11968040 -154682256 - MER53 DNA hAT -58 135 1 1 676 357 249 279 36 chrX 11968040 11968174 -154682122 + ID_B1 SINE B4 16 182 -42 1 676 189 276 23 116 chrX 11968958 11969044 -154681252 - MIR3 SINE MIR -18 190 113 1 676 204 40 0 0 chrX 11969563 11969588 -154680708 + (CCA)n Simple_repeat Simple_repeat 3 27 0 1 676 309 273 98 4 chrX 11970098 11970218 -154680078 + B2_Mm2 SINE B2 30 159 -36 1 676 2099 213 19 189 chrX 11970225 11970961 -154679335 - RMER19C LTR ERVK 0 611 1 1 676 356 326 81 29 chrX 11970994 11971130 -154679166 - MLT1H1 LTR MaLR -88 467 325 1 676 2166 85 29 65 chrX 11971190 11971531 -154678765 + ORR1A4 LTR MaLR 1 329 0 1 676 2501 100 52 5 chrX 11971532 11971914 -154678382 + ORR1A4-int LTR MaLR 2 401 -1562 1 676 8109 44 1 5 chrX 11971923 11973211 -154677085 - L1Md_F2 LINE L1 -12 6570 5290 1 676 4364 49 93 93 chrX 11973209 11973479 -154676817 + L1Md_F2 LINE L1 4598 4894 -989 1 676 226 183 46 77 chrX 11973479 11973544 -154676752 - RMER20A LTR ERVK -268 248 186 1 676 4364 49 93 93 chrX 11973544 11973904 -154676392 + L1Md_F2 LINE L1 4895 5292 -591 1 676 8818 110 66 61 chrX 11973904 11975473 -154674823 + ORR1A4-int LTR MaLR 388 1963 0 1 676 1627 110 166 31 chrX 11975473 11975763 -154674533 + ORR1A4 LTR MaLR 1 329 0 1 676 503 319 55 45 chrX 11975899 11976075 -154674221 - PB1 SINE Alu 0 320 3 1 676 637 191 76 38 chrX 11976075 11976206 -154674090 - ID_B1 SINE B4 -4 220 85 1 676 253 327 91 65 chrX 11976921 11977153 -154673143 - MLT1H1 LTR MaLR -210 339 102 1 676 448 315 124 18 chrX 11977230 11977456 -154672840 + Lx8 LINE L1 6931 7180 -293 1 676 361 184 150 29 chrX 11977497 11977637 -154672659 + Lx8 LINE L1 7315 7471 -2 1 676 715 266 15 25 chrX 11977651 11977848 -154672448 + B3A SINE B2 1 195 -3 1 676 379 279 91 118 chrX 11977898 11977926 -154672370 + B4 SINE B4 71 182 -110 1 676 784 194 0 35 chrX 11977926 11978070 -154672226 + B1_Mur1 SINE Alu 11 149 0 1 676 379 279 91 118 chrX 11978070 11978085 -154672211 + B4 SINE B4 183 252 -40 1 676 683 269 69 23 chrX 11978147 11978398 -154671898 - MIR SINE MIR 0 268 5 1 676 564 239 39 0 chrX 11978491 11978621 -154671675 + MLT1J LTR MaLR 17 151 -361 1 676 380 274 115 14 chrX 11978635 11978783 -154671513 + RSINE1 SINE B4 3 165 0 1 676 270 0 0 0 chrX 11979064 11979094 -154671202 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 676 462 36 0 0 chrX 11979094 11979149 -154671147 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 676 818 252 103 13 chrX 11979208 11979441 -154670855 - B4A SINE B4 -38 254 1 1 676 188 321 80 54 chrX 11979709 11979821 -154670475 - L2b LINE L2 -57 3330 3208 1 676 681 240 75 12 chrX 11979860 11980033 -154670263 - MTE2a LTR MaLR -8 371 188 1 676 2355 116 11 14 chrX 11980034 11980392 -154669904 - ORR1B2 LTR MaLR -8 359 3 1 676 189 74 0 0 chrX 11980404 11980431 -154669865 + (CTTG)n Simple_repeat Simple_repeat 1 27 0 1 676 648 246 19 21 chrX 11980431 11980615 -154669681 - MTE2a LTR MaLR -203 216 32 1 676 1490 234 80 16 chrX 11980615 11981002 -154669294 - MTD LTR MaLR 0 419 8 1 676 186 43 0 0 chrX 11981170 11981193 -154669103 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1 676 233 225 33 11 chrX 11981197 11981287 -154669009 + (TA)n Simple_repeat Simple_repeat 1 92 0 1 676 854 204 112 19 chrX 11981697 11981902 -154668394 - B4A SINE B4 -66 226 3 1 676 396 201 321 0 chrX 11981902 11982027 -154668269 - B4A SINE B4 -58 234 67 1 676 441 294 65 30 chrX 11982164 11982332 -154667964 - B3A SINE B2 -3 195 22 1 676 243 0 0 0 chrX 11982515 11982542 -154667754 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 676 631 282 8 0 chrX 11982542 11982666 -154667630 - B1_Mur1 SINE Alu -23 126 2 1 676 369 258 20 10 chrX 11982670 11982768 -154667528 - L1M4 LINE L1 -572 5602 5504 1 676 287 213 0 32 chrX 11982775 11982838 -154667458 + RLTR25A LTR ERVK 512 572 -531 1 676 767 32 0 0 chrX 11982783 11982878 -154667418 + B1_Mus2 SINE Alu 44 138 -9 1 676 315 0 0 0 chrX 11982878 11982913 -154667383 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 676 512 257 128 0 chrX 11983036 11983184 -154667112 - MTD LTR MaLR -31 388 222 1 676 700 115 48 0 chrX 11983189 11983293 -154667003 - B3A SINE B2 -87 111 3 1 676 1062 246 71 29 chrX 11983458 11983738 -154666558 - MLT1B LTR MaLR -22 368 77 1 676 339 25 0 0 chrX 11983751 11983791 -154666505 + (TGG)n Simple_repeat Simple_repeat 2 41 0 1 676 399 332 59 109 chrX 11983815 11984153 -154666143 - ORR1E LTR MaLR -13 346 26 1 676 581 198 25 25 chrX 11984210 11984329 -154665967 + PB1D9 SINE Alu 1 119 -1 1 676 466 170 9 28 chrX 11984638 11984747 -154665549 + RLTR15 LTR ERVK 33 139 -220 1 676 221 122 41 0 chrX 11984747 11984796 -154665500 + GA-rich Low_complexity Low_complexity 1 51 0 1 676 240 319 76 87 chrX 11984800 11985075 -154665221 + RLTR15 LTR ERVK 75 346 -13 1 676 2632 83 82 3 chrX 11985414 11985778 -154664518 + ORR1B1 LTR MaLR 1 393 -1 1 676 332 169 349 0 chrX 11987173 11987256 -154663040 - PB1D10 SINE Alu -5 112 1 1 676 1417 205 131 0 chrX 11987529 11987827 -154662469 - MTD LTR MaLR 0 419 83 1 676 924 189 99 5 chrX 11987835 11988027 -154662269 - MTD LTR MaLR -209 210 1 1 676 508 220 11 0 chrX 11988095 11988186 -154662110 - B1_Mur2 SINE Alu -56 93 2 1 676 1516 251 52 41 chrX 11988376 11988745 -154661551 + MTEb LTR MaLR 1 373 -6 1 676 571 260 117 13 chrX 11988745 11989055 -154661241 - MTD LTR MaLR -2 417 18 1 676 1688 175 60 7 chrX 11989106 11989405 -154660891 - MTC LTR MaLR -106 315 1 1 676 1492 275 123 8 chrX 11989434 11989903 -154660393 + MTE-int LTR MaLR 1 504 -866 1 676 2659 126 15 49 chrX 11989903 11990369 -154659927 + RMER6B LTR ERVK 1 450 -11 1 676 198 0 0 0 chrX 11990371 11990393 -154659903 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1 676 261 226 31 31 chrX 11990404 11990462 -154659834 + MTE-int LTR MaLR 543 600 -980 1 676 370 230 280 0 chrX 11990462 11990562 -154659734 + B1_Mur1 SINE Alu 2 129 -20 1 676 216 97 0 0 chrX 11990567 11990598 -154659698 + (GGAA)n Simple_repeat Simple_repeat 2 32 0 1 676 1507 183 42 58 chrX 11990601 11990931 -154659365 - ORR1D1 LTR MaLR 0 374 50 1 676 1837 175 240 9 chrX 11990944 11991377 -154658919 + MT2A LTR ERVL 1 533 0 1 676 31683 131 60 66 chrX 11991377 11992234 -154658062 + MERVL_2A-int LTR ERVL 1 927 -4834 1 676 1904 145 50 58 chrX 11992234 11992615 -154657681 + ORR1C1 LTR MaLR 1 378 0 1 676 31683 131 60 66 chrX 11992615 11994890 -154655406 + MERVL_2A-int LTR ERVL 928 2955 -2806 1 676 1205 68 0 0 chrX 11994890 11995037 -154655259 - B1_Mm SINE Alu 0 147 1 1 676 31683 131 60 66 chrX 11995037 11997556 -154652740 + MERVL_2A-int LTR ERVL 2956 5617 -144 1 676 283 244 35 35 chrX 11997557 11997642 -154652654 + MTE-int LTR MaLR 553 637 -1326 1 676 367 80 0 0 chrX 11997643 11997693 -154652603 + MERVL_2A-int LTR ERVL 5705 5754 -7 1 676 1362 181 68 108 chrX 11997698 11998054 -154652242 + MT2A LTR ERVL 1 471 -130 1 676 898 286 32 14 chrX 11998328 11998608 -154651688 + ERVL-B4-int LTR ERVL 241 525 -5189 1 676 258 146 24 0 chrX 11999124 11999165 -154651131 - ERVL-B4-int LTR ERVL -3873 1841 1800 1 676 541 252 80 53 chrX 11999794 11999996 -154650300 - MTD LTR MaLR -2 417 155 1 676 301 327 92 43 chrX 12000000 12000163 -154650133 - MTD LTR MaLR -245 174 4 1 676 482 227 85 6 chrX 12000273 12000450 -154649846 + L1MC3 LINE L1 5288 5478 -764 2 676 703 257 0 0 chrX 12000461 12000609 -154649687 + RSINE1 SINE B4 3 150 -15 3 676 393 22 0 0 chrX 12000683 12000729 -154649567 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 676 480 278 48 25 chrX 12000754 12000988 -154649308 + L1MC3 LINE L1 5465 5711 -2284 2 676 276 269 0 63 chrX 12001093 12001204 -154649092 + L1MC3 LINE L1 5881 5984 -1801 2 676 315 0 0 0 chrX 12001583 12001618 -154648678 + (TC)n Simple_repeat Simple_repeat 2 36 0 5 676 531 0 0 0 chrX 12001618 12001676 -154648620 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 676 435 291 65 36 chrX 12001680 12001819 -154648477 - RSINE1 SINE B4 -21 144 2 7 676 1110 209 14 9 chrX 12001833 12002046 -154648250 - B3 SINE B2 -2 214 1 8 676 551 264 59 26 chrX 12002182 12002334 -154647962 - RSINE1 SINE B4 -6 159 3 9 676 721 326 54 69 chrX 12002337 12002686 -154647610 + ORR1E LTR MaLR 1 344 -15 1 676 349 274 89 0 chrX 12003119 12003243 -154647053 + L1ME4a LINE L1 5802 5936 -188 1 676 192 204 0 140 chrX 12004346 12004403 -154645893 + MER5A DNA MER1_type 6 54 -135 1 676 258 370 53 35 chrX 12004487 12004658 -154645638 - MLT1H1 LTR MaLR -341 214 41 1 676 479 248 79 14 chrX 12004765 12004904 -154645392 + B1F SINE Alu 2 149 0 1 676 314 247 12 38 chrX 12004905 12004985 -154645311 + ID4 SINE ID 6 83 0 1 676 701 167 44 0 chrX 12005641 12005755 -154644541 + B3A SINE B2 1 119 -79 1 676 1946 227 89 39 chrX 12005755 12006220 -154644076 + RLTR20B3 LTR ERVK 1 471 -106 1 676 228 35 0 0 chrX 12006220 12006249 -154644047 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 676 1946 227 89 39 chrX 12006249 12006320 -154643976 + RLTR20B3 LTR ERVK 472 563 -14 1 676 410 263 105 0 chrX 12006325 12006420 -154643876 + B3 SINE B2 112 216 0 1 676 539 195 0 8 chrX 12006420 12006544 -154643752 + GA-rich Low_complexity Low_complexity 4 126 0 1 676 474 331 19 8 chrX 12006650 12006865 -154643431 + B4A SINE B4 12 272 -20 2 676 378 0 0 0 chrX 12006877 12006919 -154643377 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 676 2535 130 14 3 chrX 12007080 12007450 -154642846 - ORR1B1 LTR MaLR 0 394 21 2 676 249 318 30 145 chrX 12007512 12007747 -154642549 + B4 SINE B4 58 265 -27 2 676 296 310 0 0 chrX 12007834 12007892 -154642404 + B4 SINE B4 231 288 -4 2 676 736 332 104 39 chrX 12008223 12008608 -154641688 + MLT1G1 LTR MaLR 165 574 -5 2 676 802 221 36 21 chrX 12008689 12008883 -154641413 + B3A SINE B2 2 198 0 2 676 444 244 0 12 chrX 12009102 12009185 -154641111 - ID4_ SINE ID -1 82 1 2 676 299 264 36 17 chrX 12009296 12009403 -154640893 + ID4_ SINE ID 9 120 -32 2 676 860 180 7 0 chrX 12009414 12009553 -154640743 - B1_Mur2 SINE Alu -1 148 9 2 676 772 222 86 17 chrX 12009575 12009749 -154640547 - B3 SINE B2 -30 186 1 3 676 242 68 0 43 chrX 12009761 12009807 -154640489 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 3 676 653 220 23 8 chrX 12009816 12009949 -154640347 - ID_B1 SINE B4 0 224 90 3 676 341 203 0 0 chrX 12010360 12010419 -154639877 + B4A SINE B4 106 164 -128 3 676 554 27 27 0 chrX 12010424 12010499 -154639797 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 0 3 676 3126 37 59 0 chrX 12010519 12010893 -154639403 - MTA_Mm LTR MaLR 0 396 1 3 676 183 337 21 32 chrX 12010906 12011001 -154639295 - MIRb SINE MIR -141 127 34 3 676 460 209 34 60 chrX 12011779 12011896 -154638400 - RSINE1 SINE B4 -9 156 43 3 676 217 235 0 38 chrX 12011912 12011965 -154638331 + (TATG)n Simple_repeat Simple_repeat 1 51 0 3 676 866 246 60 45 chrX 12011981 12012070 -154638226 - B4A SINE B4 -18 274 175 3 676 252 0 0 0 chrX 12012070 12012098 -154638198 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 4 676 866 246 60 45 chrX 12012098 12012276 -154638020 - B4A SINE B4 -118 174 4 3 676 279 0 0 0 chrX 12012583 12012614 -154637682 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 676 480 35 0 0 chrX 12012693 12012751 -154637545 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 676 635 94 10 0 chrX 12014042 12014138 -154636158 + (TTCC)n Simple_repeat Simple_repeat 2 98 0 4 676 301 237 0 26 chrX 12014140 12014218 -154636078 + CT-rich Low_complexity Low_complexity 4 79 0 4 676 466 243 26 18 chrX 12014219 12014332 -154635964 - PB1D10 SINE Alu 0 117 4 4 676 210 337 35 0 chrX 12014350 12014436 -154635860 - MIRb SINE MIR -130 138 50 4 676 967 203 151 70 chrX 12014451 12014854 -154635442 - RLTR28B LTR ERVL -45 436 1 4 676 1261 54 0 0 chrX 12014980 12015127 -154635169 + B1_Mm SINE Alu 1 147 0 4 676 275 350 43 50 chrX 12015314 12015616 -154634680 + L2c LINE L2 2842 3142 -245 4 676 486 146 0 0 chrX 12015847 12015929 -154634367 + (TC)n Simple_repeat Simple_repeat 1 82 0 5 676 1149 247 21 0 chrX 12016176 12016304 -154633992 + ORR1E LTR MaLR 1 131 -228 5 676 186 43 0 0 chrX 12016304 12016327 -154633969 + (TGGGGG)n Simple_repeat Simple_repeat 1 23 0 5 676 1149 255 43 17 chrX 12016327 12016467 -154633829 + ORR1E LTR MaLR 112 260 -107 5 676 279 333 0 27 chrX 12016526 12016637 -154633659 - MLT1E1 LTR MaLR -11 643 536 5 676 803 298 88 18 chrX 12016939 12017223 -154633073 + MLT2C2 LTR ERVL 12 315 -149 5 676 340 350 0 20 chrX 12017229 12017331 -154632965 + PB1D10 SINE Alu 8 107 -10 5 676 270 0 0 0 chrX 12017471 12017501 -154632795 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 676 651 248 48 28 chrX 12017501 12017646 -154632650 - B3A SINE B2 -50 148 1 5 676 304 326 11 0 chrX 12017820 12017909 -154632387 + MER34 LTR ERV1 326 415 -127 5 676 265 259 0 0 chrX 12017990 12018044 -154632252 - RSINE1 SINE B4 -36 129 76 5 676 408 252 40 16 chrX 12018042 12018167 -154632129 + ORR1E LTR MaLR 83 210 -149 6 676 240 295 147 37 chrX 12018211 12018320 -154631976 + ORR1E LTR MaLR 254 374 -5 6 676 4441 178 55 54 chrX 12018485 12019380 -154630916 + RMER19B LTR ERVK 1 896 -6 6 676 587 235 72 0 chrX 12019548 12019701 -154630595 + RSINE1 SINE B4 2 165 0 6 676 514 253 102 27 chrX 12019742 12019929 -154630367 + B3 SINE B2 1 201 -15 6 676 528 288 137 50 chrX 12020378 12020721 -154629575 + MLT1G1 LTR MaLR 204 576 -3 6 676 695 280 146 28 chrX 12020781 12020960 -154629336 - MLT1A0 LTR MaLR -4 361 160 6 676 360 0 0 0 chrX 12020960 12021000 -154629296 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 676 695 280 146 28 chrX 12021000 12021143 -154629153 - MLT1A0 LTR MaLR -206 159 2 6 676 182 214 25 114 chrX 12021283 12021362 -154628934 - MIR SINE MIR -162 100 29 6 676 782 50 10 0 chrX 12021556 12021657 -154628639 + MTB_Mm LTR MaLR 1 102 -305 6 676 332 340 14 0 chrX 12021691 12021832 -154628464 + L1ME3 LINE L1 5796 5938 -224 6 676 593 227 108 54 chrX 12021856 12022042 -154628254 - B3A SINE B2 0 198 3 7 676 378 0 0 0 chrX 12022774 12022816 -154627480 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 676 829 200 14 0 chrX 12022829 12022969 -154627327 - RSINE1 SINE B4 -21 144 3 7 676 339 308 0 0 chrX 12023575 12023653 -154626643 + ID4_ SINE ID 1 78 -5 7 676 1047 292 63 48 chrX 12023717 12023968 -154626328 + MTD LTR MaLR 18 264 -155 7 676 342 0 0 0 chrX 12023968 12024006 -154626290 + (TC)n Simple_repeat Simple_repeat 2 39 0 7 676 1047 292 63 48 chrX 12024006 12024150 -154626146 + MTD LTR MaLR 265 419 0 7 676 302 244 37 49 chrX 12024455 12024537 -154625759 + MLT1G1 LTR MaLR 505 586 -5 7 676 307 320 86 119 chrX 12024559 12024921 -154625375 - ORR1D1 LTR MaLR -7 367 18 7 676 249 257 120 14 chrX 12025147 12025289 -154625007 + HAL1 LINE L1 2035 2191 -316 7 676 1004 237 142 25 chrX 12025327 12025643 -154624653 + ORR1E LTR MaLR 7 359 0 7 676 780 212 117 15 chrX 12025852 12026048 -154624248 - B3 SINE B2 0 216 1 8 676 528 178 67 0 chrX 12026079 12026169 -154624127 - B1_Mur2 SINE Alu -52 97 2 8 676 384 314 102 25 chrX 12026182 12026339 -154623957 - MLT1C LTR MaLR -298 169 1 8 676 205 138 0 0 chrX 12026475 12026504 -154623792 + (CAG)n Simple_repeat Simple_repeat 1 29 0 8 676 393 297 17 8 chrX 12026509 12026628 -154623668 + PB1D7 SINE Alu 1 120 0 8 676 517 260 144 92 chrX 12027109 12027235 -154623061 + B3 SINE B2 1 150 -66 8 676 348 24 0 0 chrX 12027235 12027276 -154623020 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 676 517 260 144 92 chrX 12027276 12027344 -154622952 + B3 SINE B2 151 205 -11 8 676 432 283 0 21 chrX 12027620 12027740 -154622556 - B1F SINE Alu -6 111 2 8 676 540 227 0 29 chrX 12027755 12027891 -154622405 - L1MA4 LINE L1 -367 5933 5802 8 676 1615 186 40 100 chrX 12027902 12028302 -154621994 + ORR1C2 LTR MaLR 9 384 0 8 676 558 248 0 54 chrX 12028305 12028471 -154621825 - L1_Mur3 LINE L1 -131 5749 5593 9 676 2453 60 119 11 chrX 12028471 12028823 -154621473 + RLTR10 LTR ERVK 1 390 0 9 676 1461 201 49 61 chrX 12028874 12029218 -154621078 - MTE2b LTR MaLR -39 340 1 9 676 345 270 11 22 chrX 12029260 12029351 -154620945 - RMER15 LTR ERVL -191 384 295 9 676 560 200 32 25 chrX 12029375 12029506 -154620790 - B1_Mur1 SINE Alu -9 140 2 9 676 258 246 7 16 chrX 12029512 12029639 -154620657 - L1MA4 LINE L1 -814 5486 5335 8 676 1365 238 24 3 chrX 12030253 12030548 -154619748 - RMER15 LTR ERVL 0 575 275 9 676 311 242 50 50 chrX 12030578 12030678 -154619618 - RMER15 LTR ERVL -475 100 1 9 676 270 208 81 27 chrX 12030728 12030802 -154619494 + MLT1J1 LTR MaLR 63 140 -304 9 676 2027 114 40 6 chrX 12031971 12032298 -154617998 - ORR1A1 LTR MaLR -8 338 1 9 676 1213 68 0 7 chrX 12032739 12032887 -154617409 - B1_Mus2 SINE Alu 0 147 1 9 676 180 350 124 0 chrX 12032897 12032994 -154617302 + L2b LINE L2 3229 3337 -38 9 676 268 224 17 0 chrX 12033287 12033345 -154616951 - MLT1M LTR MaLR -486 186 128 1 676 189 11 0 143 chrX 12033413 12033518 -154616778 + (GTTTG)n Simple_repeat Simple_repeat 4 93 0 1 676 1321 229 42 33 chrX 12033553 12033860 -154616436 + MTEb LTR MaLR 21 330 -49 1 676 245 312 62 15 chrX 12033920 12033985 -154616311 - B3 SINE B2 -64 152 85 1 676 532 224 37 0 chrX 12034413 12034520 -154615776 - B3A SINE B2 -84 114 4 1 676 798 271 92 52 chrX 12034524 12034949 -154615347 - Lx8 LINE L1 -29 7444 7003 1 676 455 255 0 28 chrX 12035410 12035519 -154614777 - MLT1A0 LTR MaLR -1 364 259 1 676 762 202 85 30 chrX 12035538 12035737 -154614559 + B3 SINE B2 5 214 -2 1 676 994 261 80 67 chrX 12035771 12036132 -154614164 - MTD LTR MaLR -53 366 1 1 676 590 65 0 0 chrX 12036521 12036598 -154613698 + BGLII LTR ERVK 1 77 -344 1 676 1591 100 151 25 chrX 12037078 12037356 -154612940 + BGLII LTR ERVK 1 313 -108 1 676 1000 71 8 0 chrX 12037356 12037482 -154612814 + B1_Mus2 SINE Alu 2 128 -19 1 676 440 238 9 9 chrX 12037530 12037636 -154612660 - PB1D10 SINE Alu 0 117 12 1 676 327 326 0 113 chrX 12037669 12037766 -154612530 - PB1 SINE Alu -33 94 9 1 676 795 204 88 16 chrX 12038215 12038409 -154611887 - B3 SINE B2 0 216 9 1 676 582 230 103 0 chrX 12038606 12038732 -154611564 + RSINE1 SINE B4 3 141 -24 1 676 939 112 0 0 chrX 12038748 12038900 -154611396 + (CA)n Simple_repeat Simple_repeat 1 152 0 1 676 304 226 122 51 chrX 12039111 12039209 -154611087 - PB1D9 SINE Alu -15 105 1 1 676 828 219 20 54 chrX 12039211 12039414 -154610882 - B3A SINE B2 0 198 3 1 676 261 320 62 0 chrX 12039900 12039997 -154610299 - Charlie10 DNA MER1_type -2695 127 25 1 676 227 354 50 10 chrX 12040758 12040858 -154609438 + MLT1K LTR MaLR 190 293 -302 1 676 192 308 103 0 chrX 12041230 12041308 -154608988 + L2c LINE L2 3106 3191 -196 1 676 592 185 52 7 chrX 12041632 12041768 -154608528 + RLTR28B LTR ERVL 45 186 -295 1 676 2499 56 0 21 chrX 12041771 12042101 -154608195 - L1Md_F2 LINE L1 -107 6475 6153 1 676 1704 72 0 0 chrX 12042098 12042321 -154607975 + L1Md_F2 LINE L1 5954 6176 -406 1 676 196 53 26 26 chrX 12042765 12042804 -154607492 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 676 305 303 13 0 chrX 12042804 12042880 -154607416 - ID4_ SINE ID -6 77 1 1 676 461 318 84 39 chrX 12045380 12045419 -154604877 + LTR82B Low_complexity ERVL 341 638 -192 1 676 521 347 45 29 chrX 12045419 12045665 -154604631 + LTR82A LTR ERVL 425 674 -198 1 676 255 269 15 0 chrX 12045723 12045790 -154604506 + LTR82B Low_complexity ERVL 744 811 -19 1 676 209 161 0 0 chrX 12046201 12046232 -154604064 + C-rich Low_complexity Low_complexity 2 32 0 1 676 980 112 110 17 chrX 12046240 12046413 -154603883 - B2_Mm2 SINE B2 -5 190 2 1 676 382 248 54 91 chrX 12047003 12047188 -154603108 - RMER10A LTR ERVL -23 419 253 1 676 1770 149 89 13 chrX 12047188 12047569 -154602727 + RMER17C LTR ERVK 1 410 0 1 676 337 260 84 80 chrX 12047569 12047714 -154602582 - RMER10A LTR ERVL -179 263 122 1 676 958 109 0 21 chrX 12048206 12048346 -154601950 - B1_Mus2 SINE Alu -9 138 2 1 676 1102 109 7 0 chrX 12048524 12048671 -154601625 + B1_Mus1 SINE Alu 1 148 0 1 676 182 136 0 22 chrX 12048677 12048722 -154601574 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 1 676 898 230 39 130 chrX 12049479 12049764 -154600532 - B4 SINE B4 -12 280 22 1 676 236 54 54 0 chrX 12049786 12049823 -154600473 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 676 265 225 62 12 chrX 12050029 12050110 -154600186 - MLT1H1 LTR MaLR -418 137 53 1 676 218 252 146 65 chrX 12050657 12050780 -154599516 + MIRc SINE MIR 16 148 -120 1 676 269 206 0 81 chrX 12050895 12050969 -154599327 - BC1_Mm scRNA scRNA -12 71 4 1 676 397 250 67 0 chrX 12050983 12051087 -154599209 - B1F SINE Alu -5 144 34 1 676 445 237 112 17 chrX 12051162 12051278 -154599018 - RSINE1 SINE B4 -36 129 3 1 676 780 275 45 0 chrX 12051306 12051484 -154598812 + B3 SINE B2 4 189 -27 1 676 307 229 14 41 chrX 12051619 12051692 -154598604 - B1F1 SINE Alu -35 114 44 1 676 1266 260 42 21 chrX 12052733 12053067 -154597229 + ORR1E LTR MaLR 19 359 0 1 676 366 270 130 0 chrX 12054322 12054422 -154595874 + PB1D7 SINE Alu 1 113 -7 1 676 1071 242 82 4 chrX 12054554 12054811 -154595485 + B4A SINE B4 10 286 -6 1 676 350 277 114 8 chrX 12055056 12055187 -154595109 - MLT1C LTR MaLR -104 363 219 1 676 1054 122 5 117 chrX 12055233 12055327 -154594969 - RLTR11A2 LTR ERVK -3 524 450 1 676 3513 50 23 5 chrX 12055327 12055764 -154594532 - L1_Mus1 LINE L1 -4 6563 6119 1 676 1593 184 19 55 chrX 12055764 12056249 -154594047 - RLTR11A2 LTR ERVK -78 449 1 1 676 567 233 45 30 chrX 12056759 12056892 -154593404 - B1F1 SINE Alu 0 149 15 1 676 279 0 0 0 chrX 12057110 12057141 -154593155 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 676 241 333 0 0 chrX 12057538 12057604 -154592692 - B4A SINE B4 -6 286 221 1 676 418 211 156 10 chrX 12057662 12057758 -154592538 - RSINE1 SINE B4 -13 152 43 1 676 758 147 0 49 chrX 12057770 12057892 -154592404 + MT2A LTR ERVL 6 121 -412 1 676 631 130 109 44 chrX 12057896 12058033 -154592263 - Lx6 LINE L1 -4 7456 7311 1 676 1340 70 41 0 chrX 12058034 12058206 -154592090 + B2_Mm2 SINE B2 3 181 -14 1 676 432 96 0 11 chrX 12058234 12058348 -154591948 + B2_Mm2 SINE B2 47 195 0 1 676 4419 198 48 68 chrX 12058348 12058388 -154591908 - Lx7 LINE L1 -125 7571 7539 1 84 3021 34 0 0 chrX 12058388 12058740 -154591556 + L1Md_F3 LINE L1 6217 6568 -16 1 677 4419 198 48 68 chrX 12058740 12059780 -154590516 - Lx7 LINE L1 -158 7538 6513 1 677 718 121 26 8 chrX 12059773 12059890 -154590406 - L1_Mur3 LINE L1 -1697 4183 4065 1 677 943 218 52 62 chrX 12059890 12060216 -154590080 + MT2B LTR ERVL 60 545 -56 1 677 552 97 0 0 chrX 12060216 12060309 -154589987 + (TAGA)n Simple_repeat Simple_repeat 1 93 0 1 677 943 252 71 97 chrX 12060309 12060374 -154589922 + MT2B LTR ERVL 546 601 0 1 677 494 264 116 45 chrX 12060394 12060549 -154589747 - B4 SINE B4 -59 233 68 1 677 582 351 56 14 chrX 12060751 12060819 -154589477 + LTR16C LTR ERVL 192 263 -226 1 677 1320 58 46 12 chrX 12060819 12060992 -154589304 + B2_Mm2 SINE B2 2 180 -15 1 677 306 0 0 0 chrX 12060992 12061026 -154589270 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 677 582 351 56 14 chrX 12061026 12061242 -154589054 + LTR16C LTR ERVL 264 488 -1 1 677 1072 278 106 48 chrX 12061486 12061864 -154588432 - MTD LTR MaLR -15 404 5 1 677 397 296 0 65 chrX 12061876 12061963 -154588333 + PB1D10 SINE Alu 2 84 -33 1 677 3048 62 25 15 chrX 12061963 12062355 -154587941 + MTA_Mm LTR MaLR 1 396 0 1 677 397 296 0 65 chrX 12062355 12062390 -154587906 + PB1D10 SINE Alu 85 116 -1 1 677 2183 159 15 49 chrX 12063672 12064062 -154586234 - ORR1C1 LTR MaLR -1 377 1 1 677 756 171 14 7 chrX 12064062 12064209 -154586087 - ORR1C1-int LTR MaLR 0 1509 1362 1 677 4314 226 30 21 chrX 12064184 12065165 -154585131 - ORR1C1-int LTR MaLR -381 989 1 1 677 1906 124 124 63 chrX 12065165 12065278 -154585018 - ORR1C1 LTR MaLR 0 384 285 1 677 1217 41 0 13 chrX 12065278 12065427 -154584869 + B1_Mus1 SINE Alu 2 148 0 1 677 1906 124 124 63 chrX 12065427 12065675 -154584621 - ORR1C1 LTR MaLR -100 284 1 1 677 681 256 30 0 chrX 12065766 12065930 -154584366 + L1M3 LINE L1 5618 5786 -385 1 677 236 304 37 81 chrX 12065933 12066069 -154584227 + MER65D LTR ERV1 2 131 -342 1 677 1224 91 57 0 chrX 12066247 12066423 -154583873 + B2_Mm1t SINE B2 1 186 -7 1 677 612 269 64 12 chrX 12066445 12066464 -154583832 - B3A SINE B2 -14 184 167 1 677 237 33 0 0 chrX 12066464 12066494 -154583802 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 677 612 269 64 12 chrX 12066494 12066510 -154583786 - B3A SINE B2 -32 166 151 1 677 450 0 0 0 chrX 12066510 12066560 -154583736 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 677 612 269 64 12 chrX 12066560 12066696 -154583600 - B3A SINE B2 -48 150 4 1 677 265 250 0 111 chrX 12066697 12066778 -154583518 + MTEb LTR MaLR 1 72 -307 1 677 462 254 83 14 chrX 12066868 12067012 -154583284 + RMER15 LTR ERVL 407 560 -15 1 677 572 229 10 2 chrX 12067004 12067137 -154583159 + MTEb LTR MaLR 51 183 -196 1 677 448 263 0 26 chrX 12067263 12067380 -154582916 - Lx8 LINE L1 -322 7151 7038 1 677 266 206 236 37 chrX 12067380 12067541 -154582755 + MTEb LTR MaLR 177 369 -10 1 677 574 160 345 22 chrX 12067640 12067870 -154582426 + MTE2b LTR MaLR 77 379 0 1 677 222 105 0 0 chrX 12068656 12068694 -154581602 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 677 2387 58 26 0 chrX 12072286 12072597 -154577699 - ORR1A2 LTR MaLR -8 319 1 1 677 566 244 121 35 chrX 12072597 12072771 -154577525 - ID_B1 SINE B4 -31 193 5 1 677 721 289 61 74 chrX 12072773 12073115 -154577181 - ORR1E LTR MaLR -18 361 1 1 677 306 310 65 57 chrX 12073458 12073480 -154576816 + ID_B1 SINE B4 79 150 -74 1 677 265 300 103 48 chrX 12073480 12073536 -154576760 + B1F SINE Alu 15 72 -77 1 677 377 173 29 9 chrX 12073536 12073641 -154576655 + Lx9 LINE L1 7538 7644 0 1 677 306 310 65 57 chrX 12073641 12073685 -154576611 + ID_B1 SINE B4 151 202 -22 1 677 265 300 103 48 chrX 12073685 12073710 -154576586 + B1F SINE Alu 73 147 -2 1 677 684 249 47 21 chrX 12073816 12073999 -154576297 + B3 SINE B2 8 184 -11 1 677 230 378 14 0 chrX 12074836 12074910 -154575386 - tRNA-Ala-GCA tRNA tRNA 0 75 1 1 677 268 288 0 0 chrX 12074950 12075016 -154575280 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 677 961 269 46 35 chrX 12075026 12075219 -154575077 - B4 SINE B4 0 292 92 1 677 1228 101 51 0 chrX 12075219 12075397 -154574899 - B2_Mm1t SINE B2 -6 187 1 1 677 961 269 46 35 chrX 12075397 12075488 -154574808 - B4 SINE B4 -201 91 5 1 677 397 298 70 23 chrX 12075491 12075663 -154574633 + MLT1G LTR MaLR 33 212 -379 1 677 339 374 64 43 chrX 12075768 12075955 -154574341 + MLT1G LTR MaLR 359 549 -6 1 677 864 180 122 27 chrX 12076728 12076916 -154573380 + B3 SINE B2 11 216 0 1 677 1024 291 37 108 chrX 12076930 12077439 -154572857 + Lx8 LINE L1 6989 7461 -12 1 677 211 234 26 0 chrX 12078096 12078173 -154572123 + CT-rich Low_complexity Low_complexity 3 81 0 1 677 257 235 130 32 chrX 12078330 12078453 -154571843 - LTR16C LTR ERVL -96 393 259 1 677 253 257 40 13 chrX 12079440 12079515 -154570781 - L2a LINE L2 -5 3421 3345 1 677 593 267 83 10 chrX 12079518 12079722 -154570574 - LTR79 LTR ERVL -4 523 305 2 677 1280 230 15 19 chrX 12080035 12080305 -154569991 + B4 SINE B4 3 271 -21 2 677 720 205 147 0 chrX 12080334 12080490 -154569806 + RMER1A Other Other 85 263 -767 2 677 3168 214 212 9 chrX 12080493 12081299 -154568997 + RMER1A Other Other 40 1009 -21 2 677 1785 132 199 25 chrX 12081575 12081932 -154568364 + MTD LTR MaLR 1 419 0 2 677 3514 28 2 0 chrX 12082197 12082596 -154567700 - MTB LTR MaLR 0 400 1 2 677 569 351 36 9 chrX 12082597 12082821 -154567475 + Tigger5 DNA MER2_type 8 237 -2169 2 677 251 274 11 35 chrX 12082885 12082972 -154567324 + Lx8 LINE L1 7017 7101 -372 2 677 271 218 0 0 chrX 12083089 12083144 -154567152 + RMER15 LTR ERVL 424 478 -97 2 677 381 200 0 0 chrX 12083452 12083516 -154566780 + B4A SINE B4 32 95 -197 2 677 220 234 248 18 chrX 12083516 12083625 -154566671 + RSINE1 SINE B4 2 135 -30 2 677 560 262 104 55 chrX 12083673 12083875 -154566421 + B4A SINE B4 81 292 0 2 677 1353 72 44 0 chrX 12084236 12084416 -154565880 + B2_Mm1t SINE B2 2 189 -4 2 677 306 284 76 29 chrX 12084694 12084799 -154565497 - ORR1E LTR MaLR -248 111 2 2 677 258 32 0 0 chrX 12084931 12084962 -154565334 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 677 225 230 0 0 chrX 12084962 12085036 -154565260 + (TG)n Simple_repeat Simple_repeat 2 75 0 2 677 450 0 0 0 chrX 12085036 12085086 -154565210 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 677 857 272 91 8 chrX 12085102 12085365 -154564931 - B4A SINE B4 -4 288 4 2 677 3180 52 10 7 chrX 12086105 12086508 -154563788 - L1Md_F2 LINE L1 -12 6570 6167 2 677 1072 281 7 22 chrX 12086709 12086978 -154563318 + B4 SINE B4 1 265 -27 2 677 408 118 0 0 chrX 12086984 12087052 -154563244 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 677 228 260 36 83 chrX 12087070 12087154 -154563142 + MLT1C LTR MaLR 110 189 -438 2 677 375 279 77 0 chrX 12087155 12087259 -154563037 + PB1D10 SINE Alu 5 116 -1 2 677 440 313 157 15 chrX 12087256 12087454 -154562842 + MLT1C LTR MaLR 173 398 -69 2 677 271 286 50 30 chrX 12087539 12087640 -154562656 + LTR16C LTR ERVL 309 411 -78 2 677 338 316 26 0 chrX 12087760 12087874 -154562422 - PB1D7 SINE Alu 0 120 4 2 677 509 267 326 25 chrX 12087876 12088234 -154562062 + MLT1D LTR MaLR 35 499 -6 2 677 320 253 31 21 chrX 12088248 12088345 -154561951 + MIRc SINE MIR 70 167 -101 2 677 660 214 16 0 chrX 12088491 12088617 -154561679 - B1_Mur1 SINE Alu 0 149 22 2 677 278 320 49 98 chrX 12088494 12088657 -154561639 - B4 SINE B4 -69 223 69 2 677 386 226 123 102 chrX 12088672 12088688 -154561608 - B2_Mm2 SINE B2 -1 194 181 2 677 1034 84 42 0 chrX 12088688 12088830 -154561466 - B1_Mus1 SINE Alu 0 148 1 2 677 577 226 123 102 chrX 12088830 12089000 -154561296 - B3A SINE B2 -15 180 4 2 677 21 0 0 0 chrX 12089035 12089056 -154561240 + AT_rich Low_complexity Low_complexity 1 21 0 2 677 317 257 0 54 chrX 12089069 12089143 -154561153 - ID4_ SINE ID -13 70 1 2 677 245 263 19 120 chrX 12089207 12089315 -154560981 + MTEa LTR MaLR 1 97 -282 2 677 941 308 29 52 chrX 12089255 12089601 -154560695 + MT2A LTR ERVL 124 461 -72 2 677 319 309 24 0 chrX 12090168 12090252 -154560044 + RSINE1 SINE B4 1 86 -79 2 677 410 65 16 0 chrX 12090305 12090367 -154559929 + (TA)n Simple_repeat Simple_repeat 1 63 0 2 677 585 0 0 0 chrX 12090744 12090809 -154559487 + (GGA)n Simple_repeat Simple_repeat 3 67 0 2 677 777 51 0 0 chrX 12090809 12090907 -154559389 + (GAGAA)n Simple_repeat Simple_repeat 3 100 0 2 677 1876 184 80 5 chrX 12091031 12091408 -154558888 - MTD LTR MaLR -14 405 1 2 677 526 163 11 11 chrX 12091430 12091517 -154558779 - MTE2a LTR MaLR -13 366 280 2 677 369 0 0 0 chrX 12091612 12091653 -154558643 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 677 306 281 133 19 chrX 12091951 12092056 -154558240 + PB1D10 SINE Alu 1 117 0 2 677 592 160 8 8 chrX 12092613 12092733 -154557563 + GA-rich Low_complexity Low_complexity 2 121 0 2 677 259 349 48 115 chrX 12093126 12093395 -154556901 + LTR16E1 LTR ERVL 257 507 -31 2 677 227 319 128 32 chrX 12093469 12093563 -154556733 + MER45R DNA Tip100 2 104 -1477 2 677 1177 239 58 107 chrX 12093591 12093985 -154556311 + MTE2a LTR MaLR 2 376 -3 2 677 240 220 0 0 chrX 12093988 12094038 -154556258 + MER45R DNA Tip100 127 176 -1405 2 677 263 309 81 89 chrX 12094110 12094345 -154555951 + ORR1E LTR MaLR 22 254 -105 2 677 302 216 12 98 chrX 12094439 12094521 -154555775 - PB1D10 SINE Alu -42 75 1 2 677 276 300 16 98 chrX 12094521 12094554 -154555742 - ID_B1 SINE B4 -62 145 51 2 677 424 222 22 11 chrX 12094913 12095004 -154555292 + B4 SINE B4 6 97 -195 2 677 379 35 17 17 chrX 12095020 12095078 -154555218 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 677 4491 211 29 24 chrX 12095078 12096041 -154554255 + MER45R DNA Tip100 614 1581 0 2 677 1388 206 53 22 chrX 12096090 12096453 -154553843 + MTC LTR MaLR 1 399 -8 2 677 685 261 104 30 chrX 12096741 12097009 -154553287 - B4A SINE B4 0 292 5 2 677 762 211 163 0 chrX 12097166 12097332 -154552964 - B3A SINE B2 -4 194 2 2 677 906 254 14 223 chrX 12097336 12097762 -154552534 - MTEa LTR MaLR -42 337 1 2 677 231 255 0 0 chrX 12097997 12098048 -154552248 - Charlie12 DNA MER1_type -2773 100 50 2 677 5464 91 11 8 chrX 12098320 12099054 -154551242 - RMER19A LTR ERVK 0 737 2 2 677 570 284 74 63 chrX 12099264 12099590 -154550706 - HERV16-int LTR ERVL -3390 2324 1994 2 677 276 288 0 0 chrX 12099735 12099801 -154550495 + MER2 DNA MER2_type 1 66 -279 2 677 747 241 71 21 chrX 12099810 12100018 -154550278 - B3A SINE B2 0 216 2 2 677 391 202 23 130 chrX 12100113 12100148 -154550148 + ID_B1 SINE B4 63 179 -45 2 677 228 276 43 103 chrX 12100149 12100244 -154550052 + MT2B LTR ERVL 170 254 -347 2 677 300 53 0 0 chrX 12100244 12100282 -154550014 + (CAGA)n Simple_repeat Simple_repeat 1 38 0 2 677 228 276 43 103 chrX 12100282 12100303 -154549993 + MT2B LTR ERVL 255 279 -322 2 677 782 278 17 104 chrX 12100298 12100539 -154549757 + B4A SINE B4 73 292 0 2 677 1312 244 73 53 chrX 12100571 12100959 -154549337 + MTD LTR MaLR 24 402 -17 2 677 772 326 38 0 chrX 12100990 12101229 -154549067 + MER2 DNA MER2_type 98 345 0 2 677 403 310 83 47 chrX 12101229 12101483 -154548813 + LTR16C LTR ERVL 227 489 0 2 677 241 314 128 0 chrX 12102100 12102202 -154548094 - L3b LINE CR1 -323 159 45 2 677 1212 229 12 12 chrX 12103147 12103395 -154546901 + B4 SINE B4 43 290 -2 2 677 365 335 56 81 chrX 12103397 12103595 -154546701 + L1ME2 LINE L1 5898 6090 -74 2 677 255 290 0 16 chrX 12103617 12103680 -154546616 + ID4_ SINE ID 1 62 -21 2 677 477 121 0 0 chrX 12103697 12103780 -154546516 + (CATA)n Simple_repeat Simple_repeat 2 84 0 2 677 552 207 62 9 chrX 12103812 12103924 -154546372 - RSINE1 SINE B4 -46 119 2 2 677 257 300 75 165 chrX 12104352 12104652 -154545644 + B4A SINE B4 20 292 0 2 677 535 267 0 0 chrX 12104719 12104835 -154545461 + PB1D10 SINE Alu 1 116 -1 2 677 480 243 31 100 chrX 12104981 12105036 -154545260 + B1F2 SINE Alu 1 54 -95 2 677 826 257 33 28 chrX 12105036 12105248 -154545048 + B3 SINE B2 4 216 0 2 677 480 243 31 100 chrX 12105248 12105352 -154544944 + B1F2 SINE Alu 55 149 0 2 677 393 302 16 87 chrX 12105382 12105567 -154544729 + B4A SINE B4 3 174 -118 2 677 2101 135 3 3 chrX 12105950 12106261 -154544035 - RLTR10E LTR ERVK 0 311 1 2 677 1272 113 11 0 chrX 12106370 12106547 -154543749 + B2_Mm1t SINE B2 1 179 -14 2 677 411 90 364 91 chrX 12106584 12106694 -154543602 + B2_Mm2 SINE B2 47 186 -9 2 677 416 222 205 53 chrX 12106873 12107044 -154543252 - B3A SINE B2 0 198 2 2 677 319 317 92 0 chrX 12107103 12107223 -154543073 - MIRc SINE MIR -53 215 85 2 677 381 162 0 59 chrX 12107267 12107352 -154542944 - MLT1A1 LTR MaLR -5 403 324 2 677 2476 98 68 3 chrX 12107372 12107742 -154542554 - ORR1B1 LTR MaLR 0 394 1 2 677 703 271 179 15 chrX 12107922 12108184 -154542112 + MTEa LTR MaLR 75 379 0 2 677 556 281 33 40 chrX 12108210 12108317 -154541979 + RSINE1 SINE B4 15 120 -45 2 677 2444 97 98 10 chrX 12108317 12108704 -154541592 + BGLII LTR ERVK 1 421 0 2 677 556 281 33 40 chrX 12108704 12108748 -154541548 + RSINE1 SINE B4 121 165 0 2 677 344 248 57 38 chrX 12108765 12108870 -154541426 + ID_B1 SINE B4 47 153 -71 2 677 9410 54 0 1 chrX 12108870 12110019 -154540277 + L1Md_F2 LINE L1 4439 5586 -297 2 677 7887 47 29 7 chrX 12110019 12110994 -154539302 + L1Md_F2 LINE L1 5587 6582 0 2 677 402 286 19 6 chrX 12111488 12111612 -154538684 - PB1D10 SINE Alu -28 122 2 2 677 232 267 30 114 chrX 12111719 12111850 -154538446 + L2 LINE L2 1749 1868 -1551 2 677 200 298 147 60 chrX 12111971 12112121 -154538175 - L3 LINE CR1 -12 4477 4315 2 677 1106 259 38 0 chrX 12112233 12112496 -154537800 + B4A SINE B4 2 274 -18 2 677 345 24 0 0 chrX 12112514 12112556 -154537740 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 677 1772 166 105 68 chrX 12112598 12112953 -154537343 + MT2B LTR ERVL 1 491 -110 2 677 3632 58 41 2 chrX 12112953 12113417 -154536879 + RLTR45 LTR ERVK 1 482 0 2 677 1772 154 57 63 chrX 12113417 12113476 -154536820 + MT2B LTR ERVL 492 544 -57 2 677 629 58 12 0 chrX 12113476 12113562 -154536734 + (TAGA)n Simple_repeat Simple_repeat 3 89 0 2 677 1772 154 57 63 chrX 12113562 12113611 -154536685 + MT2B LTR ERVL 545 601 0 2 677 276 253 62 93 chrX 12113650 12113758 -154536538 + B1F2 SINE Alu 17 117 0 2 677 214 284 98 45 chrX 12114094 12114227 -154536069 + L2 LINE L2 2367 2506 -913 2 677 1221 222 104 138 chrX 12114364 12114740 -154535556 + MTE2b LTR MaLR 3 365 -14 2 677 257 209 69 69 chrX 12114812 12114884 -154535412 + MIR SINE MIR 90 161 -101 2 677 688 243 61 27 chrX 12114884 12114955 -154535341 + ID SINE ID 5 80 -144 3 677 402 277 57 38 chrX 12114955 12115060 -154535236 + PB1D10 SINE Alu 4 110 -7 3 677 205 288 29 29 chrX 12115069 12115137 -154535159 + MIR SINE MIR 148 215 -47 2 677 556 156 33 0 chrX 12115181 12115271 -154535025 + B3A SINE B2 2 94 -104 3 677 342 232 67 67 chrX 12115457 12115477 -154534819 + MT2B LTR ERVL 145 164 -437 3 677 481 200 115 77 chrX 12115477 12115607 -154534689 + B1_Mur4 SINE Alu 2 136 -14 3 677 456 19 0 0 chrX 12115607 12115660 -154534636 + (TAAAA)n Simple_repeat Simple_repeat 5 57 0 3 677 970 286 44 16 chrX 12115688 12115747 -154534549 + B4 SINE B4 20 79 -213 3 677 183 80 0 0 chrX 12115747 12115772 -154534524 + (TTG)n Simple_repeat Simple_repeat 1 25 0 3 677 970 286 44 16 chrX 12115772 12115964 -154534332 + B4 SINE B4 80 278 -14 3 677 270 0 0 0 chrX 12115986 12116016 -154534280 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 677 1375 75 37 16 chrX 12116195 12116385 -154533911 + B2_Mm2 SINE B2 1 194 -1 3 677 368 255 174 7 chrX 12116447 12116585 -154533711 + MLT1A1 LTR MaLR 172 332 -76 3 677 552 207 41 16 chrX 12116573 12116696 -154533600 + B3 SINE B2 85 210 -6 3 677 279 93 0 0 chrX 12116761 12116804 -154533492 + (TC)n Simple_repeat Simple_repeat 1 43 0 3 677 267 31 0 0 chrX 12116804 12116836 -154533460 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 677 198 0 0 0 chrX 12116836 12116857 -154533439 + (GA)n Simple_repeat Simple_repeat 1 22 0 3 677 744 340 121 16 chrX 12116867 12117246 -154533050 + Arthur1B DNA Tip100 240 658 -567 3 677 470 284 39 110 chrX 12117268 12117371 -154532925 + ID_B1 SINE B4 56 155 -69 3 677 1421 44 67 0 chrX 12117371 12117551 -154532745 + B2_Mm1t SINE B2 2 193 0 3 677 470 284 39 110 chrX 12117551 12117629 -154532667 + ID_B1 SINE B4 156 224 0 3 677 377 300 32 32 chrX 12117696 12117820 -154532476 - RSINE1 SINE B4 -8 157 34 3 677 201 129 0 0 chrX 12117886 12117917 -154532379 + (CGGGGG)n Simple_repeat Simple_repeat 6 36 0 3 677 256 183 16 62 chrX 12118027 12118091 -154532205 + RSINE1 SINE B4 3 63 -102 3 677 234 0 0 0 chrX 12118729 12118755 -154531541 + (A)n Simple_repeat Simple_repeat 1 26 0 3 677 348 24 0 0 chrX 12118839 12118880 -154531416 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 677 729 236 7 35 chrX 12118891 12119036 -154531260 + RSINE1 SINE B4 4 144 -21 3 677 1699 165 71 115 chrX 12119068 12119271 -154531025 + MTD LTR MaLR 1 209 -210 3 677 1121 62 0 20 chrX 12119271 12119419 -154530877 + B1_Mm SINE Alu 2 146 -1 3 677 1699 165 71 115 chrX 12119419 12119450 -154530846 + MTD LTR MaLR 210 210 -209 3 677 852 63 0 0 chrX 12119450 12119561 -154530735 + (GAAAA)n Simple_repeat Simple_repeat 5 115 0 3 677 1699 165 71 115 chrX 12119561 12119750 -154530546 + MTD LTR MaLR 210 406 -13 3 677 237 33 0 0 chrX 12119775 12119805 -154530491 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 3 677 1339 158 225 3 chrX 12120613 12120898 -154529398 - ORR1B1 LTR MaLR 0 394 47 3 677 280 304 80 9 chrX 12121009 12121122 -154529174 + LTR16A LTR ERVL 282 402 -49 3 677 2960 59 45 20 chrX 12121192 12121589 -154528707 - MTB_Mm LTR MaLR 0 407 1 3 677 278 333 56 47 chrX 12121808 12121915 -154528381 + PB1D10 SINE Alu 1 108 -9 3 677 2291 53 56 0 chrX 12122004 12122306 -154527990 - ORR1A2 LTR MaLR -8 319 1 3 677 556 268 207 25 chrX 12122501 12122738 -154527558 - B4A SINE B4 -11 281 2 3 677 531 56 0 0 chrX 12122884 12122955 -154527341 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 677 632 242 16 0 chrX 12122982 12123106 -154527190 + B1_Mur1 SINE Alu 3 128 -21 3 677 454 320 97 6 chrX 12123131 12123307 -154526989 - MER33 DNA MER1_type -80 244 53 3 677 592 263 43 31 chrX 12123517 12123678 -154526618 + RSINE1 SINE B4 2 164 -1 3 677 21 36 0 0 chrX 12123704 12123732 -154526564 + AT_rich Low_complexity Low_complexity 1 28 0 3 677 257 321 132 98 chrX 12124749 12124816 -154525480 - MLT1H LTR MaLR -239 310 236 3 677 1254 14 0 0 chrX 12124816 12124955 -154525341 + B1_Mus2 SINE Alu 1 139 -8 3 677 257 321 132 98 chrX 12124955 12125153 -154525143 - MLT1H LTR MaLR -314 235 36 3 677 251 304 0 12 chrX 12125451 12125531 -154524765 - L1MA9 LINE L1 0 6312 6234 3 677 2110 129 0 52 chrX 12125531 12125875 -154524421 - ORR1A4 LTR MaLR 0 326 1 3 677 4134 202 61 182 chrX 12125876 12126096 -154524200 - ORR1A4-int LTR MaLR -1 1508 1333 3 677 1219 48 0 7 chrX 12126096 12126244 -154524052 + B1_Mm SINE Alu 1 147 0 3 677 5481 182 51 165 chrX 12126244 12126601 -154523695 - ORR1A4-int LTR MaLR -177 1332 959 3 677 1282 34 0 0 chrX 12126601 12126749 -154523547 - B1_Mus1 SINE Alu 0 148 1 3 677 5481 148 32 135 chrX 12126749 12127883 -154522413 - ORR1A4-int LTR MaLR -923 1040 3 3 677 2275 74 11 95 chrX 12127885 12127941 -154522355 - ORR1A4 LTR MaLR 0 329 287 3 677 1163 88 5 118 chrX 12127941 12128161 -154522135 - B2_Mm2 SINE B2 0 195 1 3 677 2275 74 11 95 chrX 12128161 12128463 -154521833 - ORR1A4 LTR MaLR -43 286 1 3 677 2824 192 145 8 chrX 12128599 12129246 -154521050 + RMER19A LTR ERVK 2 737 0 3 677 651 259 123 29 chrX 12129258 12129443 -154520853 - B3A SINE B2 0 195 9 3 677 347 0 23 0 chrX 12129443 12129486 -154520810 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 677 317 309 64 0 chrX 12129489 12129599 -154520697 + Tigger7 DNA MER2_type 2 118 -2373 3 677 281 185 130 0 chrX 12129823 12129877 -154520419 + PB1D10 SINE Alu 42 102 -15 3 677 316 252 56 35 chrX 12129830 12129944 -154520352 + ID_B1 SINE B4 43 152 -140 3 677 447 182 216 0 chrX 12129881 12129969 -154520327 + PB1D7 SINE Alu 7 113 -7 3 677 279 0 0 0 chrX 12130191 12130222 -154520074 + (TTG)n Simple_repeat Simple_repeat 2 32 0 3 677 533 291 34 112 chrX 12130636 12130814 -154519482 + RSINE1 SINE B4 2 165 0 3 677 180 259 0 0 chrX 12130832 12130886 -154519410 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 3 677 1564 162 77 50 chrX 12130912 12131249 -154519047 + ORR1B1 LTR MaLR 41 386 -8 3 677 618 184 6 11 chrX 12131311 12131492 -154518804 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 677 1476 54 5 16 chrX 12131523 12131710 -154518586 - B2_Mm1t SINE B2 -7 186 2 3 677 473 0 0 17 chrX 12131893 12131951 -154518345 + (TA)n Simple_repeat Simple_repeat 2 58 0 3 677 639 307 20 39 chrX 12131982 12132274 -154518022 + B4A SINE B4 8 292 0 3 677 328 224 0 0 chrX 12132285 12132343 -154517953 + ID4_ SINE ID 6 63 -20 3 677 1518 58 0 21 chrX 12132593 12132786 -154517510 - B2_Mm1a SINE B2 -3 190 2 3 677 1428 74 32 0 chrX 12132790 12132979 -154517317 - B2_Mm2 SINE B2 0 195 1 3 677 410 326 129 0 chrX 12133585 12133732 -154516564 + ID_B1 SINE B4 4 169 -55 3 677 325 221 10 104 chrX 12133744 12133840 -154516456 + Tigger7 DNA MER2_type 2363 2449 -42 3 677 1298 140 29 0 chrX 12133843 12134050 -154516246 + URR1B DNA MER1_type 2 214 -11 3 677 720 265 0 0 chrX 12134704 12134840 -154515456 + RSINE1 SINE B4 4 139 -26 3 677 270 0 0 0 chrX 12134840 12134870 -154515426 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 677 369 0 0 0 chrX 12134870 12134910 -154515386 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 677 402 261 172 0 chrX 12135455 12135589 -154514707 - Charlie5 DNA MER1_type -80 2544 2388 3 677 350 135 12 17 chrX 12135796 12135868 -154514428 - B2_Mm2 SINE B2 -95 121 47 3 677 1272 82 47 0 chrX 12135900 12136071 -154514225 - B2_Mm2 SINE B2 -14 181 3 3 677 251 329 88 34 chrX 12136081 12136229 -154514067 - MT2A LTR ERVL -370 163 8 3 677 858 265 15 30 chrX 12136313 12136515 -154513781 + ID_B1 SINE B4 26 224 0 3 677 216 0 0 0 chrX 12136515 12136539 -154513757 + (A)n Simple_repeat Simple_repeat 1 24 0 3 677 509 116 6 37 chrX 12136784 12136901 -154513395 + B1_Mus2 SINE Alu 38 149 0 3 677 1457 62 5 25 chrX 12136928 12137127 -154513169 + B2_Mm2 SINE B2 1 195 0 3 677 191 88 29 0 chrX 12137203 12137237 -154513059 + (GAAAA)n Simple_repeat Simple_repeat 5 39 0 3 677 228 135 0 0 chrX 12137508 12137545 -154512751 + (T)n Simple_repeat Simple_repeat 1 37 0 3 677 1032 66 81 0 chrX 12137545 12137681 -154512615 - B1_Mm SINE Alu 0 147 1 3 677 785 273 38 0 chrX 12137919 12138102 -154512194 + B3A SINE B2 6 195 -3 3 677 357 222 37 55 chrX 12138104 12138217 -154512079 - B1F1 SINE Alu -7 113 1 3 677 222 266 86 86 chrX 12138217 12138267 -154512029 - B4 SINE B4 -205 87 38 3 677 3812 162 122 20 chrX 12138332 12139162 -154511134 - RLTR25B LTR ERVK -18 1010 3 3 677 470 274 69 23 chrX 12139224 12139355 -154510941 - MLT1A1 LTR MaLR 0 408 272 3 677 456 274 0 19 chrX 12139584 12139688 -154510608 - PB1D10 SINE Alu 0 117 16 3 677 537 337 119 20 chrX 12139779 12140073 -154510223 - LTR16A LTR ERVL -100 351 29 3 677 1636 210 49 14 chrX 12140368 12140716 -154509580 + ORR1D2 LTR MaLR 3 362 -8 3 677 604 248 25 0 chrX 12140713 12140834 -154509462 + RSINE1 SINE B4 27 150 -15 3 677 474 101 0 0 chrX 12140839 12140908 -154509388 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 677 1197 77 0 6 chrX 12140969 12141125 -154509171 + ORR1A2 LTR MaLR 122 276 -51 3 677 1008 86 21 14 chrX 12141349 12141491 -154508805 - B2_Mm1a SINE B2 -8 185 43 3 677 1372 98 16 0 chrX 12141493 12141676 -154508620 - B2_Mm2 SINE B2 -8 187 2 3 677 761 256 31 8 chrX 12142035 12142247 -154508049 - MLT1C LTR MaLR -33 434 235 3 677 1643 176 114 157 chrX 12142391 12142562 -154507734 + RMER6C LTR ERVK 1 239 -451 3 677 1120 30 52 0 chrX 12142562 12142697 -154507599 + B1_Mus1 SINE Alu 1 142 -6 3 677 1643 176 114 157 chrX 12142697 12143246 -154507050 + RMER6C LTR ERVK 240 690 0 3 677 534 278 0 0 chrX 12143554 12143669 -154506627 - ID_B1 SINE B4 -3 221 107 3 677 229 323 112 20 chrX 12143711 12143809 -154506487 - PB1D10 SINE Alu -10 107 1 3 677 518 236 54 65 chrX 12143809 12143977 -154506319 + MER57F LTR ERV1 1 166 -270 3 677 414 0 0 0 chrX 12144213 12144259 -154506037 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 677 394 278 93 0 chrX 12144286 12144394 -154505902 - B4 SINE B4 -148 144 27 3 677 1140 172 57 197 chrX 12144395 12144485 -154505811 + RMER17C LTR ERVK 1 87 -323 4 677 315 0 0 0 chrX 12144485 12144520 -154505776 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 677 1140 172 57 197 chrX 12144520 12144906 -154505390 + RMER17C LTR ERVK 88 410 0 4 677 1466 59 16 0 chrX 12144909 12145095 -154505201 + B2_Mm2 SINE B2 2 190 -5 4 677 368 294 25 119 chrX 12145182 12145425 -154504871 - RMER2 LTR ERV1 0 567 348 4 677 489 325 79 38 chrX 12145654 12145867 -154504429 + MER57F LTR ERV1 163 387 -49 3 677 2622 135 31 12 chrX 12145867 12146280 -154504016 + MTC LTR MaLR 1 421 0 4 677 489 325 79 38 chrX 12146280 12146306 -154503990 + MER57F LTR ERV1 388 412 -24 3 677 1267 27 0 0 chrX 12146321 12146467 -154503829 - B1_Mm SINE Alu 0 147 2 4 677 316 319 75 25 chrX 12146470 12146631 -154503665 + YREP_Mm Unknown Unknown 138 306 -1506 4 677 549 287 0 22 chrX 12146514 12146649 -154503647 - ID_B1 SINE B4 -17 207 80 4 677 263 273 92 64 chrX 12146857 12146998 -154503298 - MLT1C LTR MaLR -344 145 1 3 677 1036 257 113 40 chrX 12147469 12147822 -154502474 + MTEa LTR MaLR 1 379 0 4 677 674 222 137 16 chrX 12147920 12148103 -154502193 + B3 SINE B2 2 206 -10 4 677 839 308 53 45 chrX 12148139 12148476 -154501820 + MER2 DNA MER2_type 2 341 -4 4 677 313 340 125 53 chrX 12149117 12149381 -154500915 - L1MC4a LINE L1 -1821 6061 5779 4 677 887 318 30 44 chrX 12149388 12149727 -154500569 + MER2 DNA MER2_type 4 337 -8 4 677 231 289 0 0 chrX 12149919 12149971 -154500325 + PB1D7 SINE Alu 9 60 -60 4 677 285 141 50 10 chrX 12149975 12150075 -154500221 + (TG)n Simple_repeat Simple_repeat 2 105 0 4 677 1266 286 3 24 chrX 12150076 12150097 -154500199 - B4 SINE B4 0 292 274 4 677 462 18 0 0 chrX 12150097 12150152 -154500144 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 677 342 0 0 0 chrX 12150152 12150189 -154500107 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 677 1266 286 3 24 chrX 12150189 12150463 -154499833 - B4 SINE B4 -19 273 3 4 677 246 235 0 38 chrX 12150463 12150515 -154499781 + PB1D10 SINE Alu 53 102 -15 4 677 248 324 0 0 chrX 12150693 12150767 -154499529 + ID2 SINE ID 9 82 -1 4 677 2009 229 111 71 chrX 12150846 12151029 -154499267 + ORR1A1-int LTR MaLR 144 313 -1057 4 677 1326 110 16 5 chrX 12151029 12151221 -154499075 + B2_Mm2 SINE B2 1 194 -1 4 677 2892 124 47 21 chrX 12151221 12152027 -154498269 + ORR1A1-int LTR MaLR 1551 1963 0 4 677 2300 125 9 3 chrX 12152027 12152371 -154497925 + ORR1A1 LTR MaLR 1 346 0 4 677 275 308 0 25 chrX 12153405 12153485 -154496811 - PB1D10 SINE Alu -1 116 39 4 677 275 275 12 0 chrX 12153643 12153723 -154496573 - ID4 SINE ID 0 83 3 4 677 1276 59 17 12 chrX 12153900 12154072 -154496224 + B2_Mm2 SINE B2 23 195 0 4 677 675 208 0 0 chrX 12155795 12155915 -154494381 + B3 SINE B2 4 123 -93 4 677 1118 36 0 21 chrX 12156062 12156203 -154494093 - B1_Mus2 SINE Alu 0 147 10 4 677 296 221 42 8 chrX 12156245 12156316 -154493980 + ID4_ SINE ID 5 72 -11 4 677 375 23 0 0 chrX 12156316 12156360 -154493936 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 677 225 0 0 0 chrX 12156387 12156412 -154493884 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 677 273 139 23 0 chrX 12156442 12156485 -154493811 + PB1D9 SINE Alu 24 67 -53 4 677 441 0 0 0 chrX 12156515 12156564 -154493732 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 677 459 0 0 0 chrX 12156827 12156878 -154493418 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 677 265 264 0 14 chrX 12156878 12156949 -154493347 - ID4_ SINE ID -11 72 5 4 677 489 246 85 90 chrX 12156974 12157175 -154493121 + RMER30 DNA MER1_type 2 201 -1 4 677 339 233 188 8 chrX 12157256 12157373 -154492923 + B1F SINE Alu 2 139 -10 4 677 216 0 0 0 chrX 12157377 12157401 -154492895 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 4 677 207 0 0 0 chrX 12157435 12157458 -154492838 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 677 1178 68 0 13 chrX 12157473 12157622 -154492674 - B1_Mm SINE Alu 0 147 1 4 677 336 293 0 39 chrX 12157929 12158032 -154492264 + BC1_Mm scRNA scRNA 1 99 -53 4 677 180 0 0 0 chrX 12158033 12158053 -154492243 + (GGGGA)n Simple_repeat Simple_repeat 2 21 0 4 677 306 278 31 83 chrX 12158057 12158099 -154492197 - RMER10B LTR ERVL -133 265 229 4 677 576 41 62 0 chrX 12158099 12158196 -154492100 + (CAGA)n Simple_repeat Simple_repeat 2 104 0 4 677 306 278 31 83 chrX 12158196 12158381 -154491915 - RMER10B LTR ERVL -170 228 50 4 677 470 341 10 82 chrX 12158393 12158625 -154491671 - LTR33B LTR ERVL -314 189 16 4 677 914 239 116 27 chrX 12158760 12159018 -154491278 + B4A SINE B4 8 288 -4 4 677 656 77 10 0 chrX 12159036 12159140 -154491156 + (CA)n Simple_repeat Simple_repeat 2 106 0 4 677 306 0 0 0 chrX 12159140 12159173 -154491123 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 677 533 275 25 10 chrX 12159173 12159365 -154490931 - L1M5 LINE L1 -668 5505 5315 4 677 1206 238 90 11 chrX 12159483 12159840 -154490456 - L1MC3 LINE L1 -38 7747 7363 4 677 318 317 104 16 chrX 12159842 12159967 -154490329 - ORR1E LTR MaLR 0 359 224 4 677 376 274 250 39 chrX 12160052 12160220 -154490076 - B3A SINE B2 -14 202 2 4 677 3608 13 2 0 chrX 12160857 12161252 -154489044 + MTA_Mm LTR MaLR 1 396 0 4 677 9040 40 6 2 chrX 12161252 12162345 -154487951 + MTA_Mm-int LTR MaLR 1 1098 0 4 677 3608 13 2 0 chrX 12162345 12162740 -154487556 + MTA_Mm LTR MaLR 1 396 0 4 677 360 316 86 89 chrX 12162906 12163198 -154487098 - B4 SINE B4 0 292 2 4 677 22 0 0 0 chrX 12163207 12163229 -154487067 + AT_rich Low_complexity Low_complexity 1 22 0 4 677 297 203 15 15 chrX 12163747 12163812 -154486484 + ID4 SINE ID 5 69 -14 4 677 414 0 0 0 chrX 12163819 12163865 -154486431 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 4 677 253 268 113 28 chrX 12164260 12164402 -154485894 + MER53 DNA hAT 2 155 -38 4 677 1154 88 7 0 chrX 12166042 12166190 -154484106 + B1_Mur3 SINE Alu 1 149 0 4 677 758 290 104 16 chrX 12166483 12166732 -154483564 + B4 SINE B4 22 292 0 4 677 279 259 123 0 chrX 12166838 12166919 -154483377 - PB1D9 SINE Alu -25 125 34 4 677 249 288 64 2 chrX 12168895 12168977 -154481319 - L2a LINE L2 -32 3394 3274 4 677 21 0 0 0 chrX 12169747 12169768 -154480528 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 672 261 76 142 chrX 12170715 12170766 -154479530 + Lx8 LINE L1 6964 7017 -456 4 677 1088 177 34 5 chrX 12170766 12170970 -154479326 + B3 SINE B2 1 210 -6 4 677 672 261 76 142 chrX 12170970 12171432 -154478864 + Lx8 LINE L1 7018 7443 -30 4 677 240 111 0 0 chrX 12171557 12171593 -154478703 + (CATA)n Simple_repeat Simple_repeat 2 37 0 4 677 404 266 81 19 chrX 12173845 12174081 -154476215 - ORR1D2 LTR MaLR -7 363 104 4 677 1040 109 0 33 chrX 12174355 12174507 -154475789 + B1_Mus2 SINE Alu 1 147 0 4 677 1497 73 5 0 chrX 12174510 12174701 -154475595 + B2_Mm1a SINE B2 2 193 0 4 677 516 272 12 165 chrX 12175209 12175464 -154474832 + ID_B1 SINE B4 2 217 -7 4 677 541 229 34 0 chrX 12175349 12175467 -154474829 + B1F SINE Alu 24 145 -4 4 677 1459 64 5 0 chrX 12175484 12175671 -154474625 + B2_Mm1t SINE B2 1 188 -5 4 677 410 212 128 0 chrX 12175688 12175827 -154474469 - L1MA7 LINE L1 -303 5997 5836 4 677 1119 88 0 0 chrX 12175914 12176062 -154474234 - B1_Mus1 SINE Alu 0 148 1 4 677 197 33 33 0 chrX 12176096 12176126 -154474170 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 677 1084 93 0 0 chrX 12176126 12176265 -154474031 - B1_Mm SINE Alu -7 140 2 4 677 280 241 37 25 chrX 12176304 12176385 -154473911 - ID4 SINE ID 0 83 2 4 677 504 255 14 14 chrX 12176389 12176532 -154473764 - L1MA7 LINE L1 -521 5779 5637 4 677 419 225 125 42 chrX 12176532 12176676 -154473620 + B3A SINE B2 2 157 -41 4 677 24 0 0 0 chrX 12176682 12176706 -154473590 + AT_rich Low_complexity Low_complexity 1 24 0 4 677 1002 213 65 8 chrX 12176792 12177040 -154473256 - MTD LTR MaLR -14 405 158 4 677 1032 36 0 7 chrX 12177025 12177165 -154473131 + B1_Mus1 SINE Alu 10 148 0 4 677 752 208 47 52 chrX 12177180 12177373 -154472923 - MTD LTR MaLR -227 192 1 4 677 1078 62 0 0 chrX 12177398 12177542 -154472754 - B2_Mm1a SINE B2 -49 144 1 4 677 1138 82 0 7 chrX 12177883 12178031 -154472265 + B1_Mus2 SINE Alu 1 147 0 4 677 1378 56 62 0 chrX 12178249 12178428 -154471868 - B2_Mm2 SINE B2 -4 191 2 4 677 270 227 30 15 chrX 12178428 12178495 -154471801 - B1F1 SINE Alu -10 139 72 4 677 346 234 0 38 chrX 12178486 12178566 -154471730 - ID_B1 SINE B4 -132 92 16 4 677 880 104 0 0 chrX 12178826 12178960 -154471336 - B1_Mm SINE Alu 0 147 14 4 677 306 313 43 9 chrX 12179615 12179731 -154470565 + ID_B1 SINE B4 105 224 0 4 677 817 189 0 20 chrX 12179757 12179908 -154470388 + B1_Mur3 SINE Alu 1 148 -1 4 677 711 214 6 39 chrX 12179928 12180108 -154470188 - B3 SINE B2 -15 201 28 4 677 635 185 93 33 chrX 12180386 12180537 -154469759 + B3 SINE B2 1 160 -56 4 677 21 0 0 0 chrX 12180774 12180795 -154469501 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 478 194 6 45 chrX 12180799 12180977 -154469319 + (CATA)n Simple_repeat Simple_repeat 2 172 0 4 677 231 140 0 0 chrX 12181254 12181304 -154468992 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 4 677 1255 35 0 0 chrX 12181304 12181448 -154468848 - B1_Mus1 SINE Alu 0 148 5 4 677 216 0 0 0 chrX 12181463 12181487 -154468809 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 4 677 239 275 27 80 chrX 12181551 12181701 -154468595 + L1MA4A LINE L1 5798 5939 -364 4 677 439 238 156 16 chrX 12182815 12182943 -154467353 - B1_Mur1 SINE Alu 0 149 4 4 677 219 261 14 55 chrX 12184306 12184379 -154465917 - ID4_ SINE ID 0 83 14 4 677 462 174 0 0 chrX 12184454 12184523 -154465773 + ID4_ SINE ID 2 70 -13 4 677 464 254 0 35 chrX 12184577 12184691 -154465605 + PB1D10 SINE Alu 6 115 -2 4 677 278 300 53 15 chrX 12184782 12184914 -154465382 - L1MB4 LINE L1 -16 6164 6028 5 677 1161 74 0 26 chrX 12185207 12185359 -154464937 - B1_Mus1 SINE Alu 0 148 1 5 677 288 252 63 0 chrX 12185523 12185634 -154464662 + L1MA8 LINE L1 6157 6274 -17 5 677 619 271 58 0 chrX 12185664 12185852 -154464444 + MER2 DNA MER2_type 118 316 -29 5 677 498 287 62 20 chrX 12186183 12186329 -154463967 + RSINE1 SINE B4 9 160 -5 5 677 575 296 0 0 chrX 12186367 12186502 -154463794 + ID_B1 SINE B4 79 213 -11 5 677 2348 26 0 0 chrX 12186657 12186926 -154463370 - L1Md_A LINE L1 0 6582 6314 5 677 291 161 18 0 chrX 12186982 12187038 -154463258 + URR1B DNA MER1_type 169 225 0 5 677 488 294 7 40 chrX 12187154 12187303 -154462993 + ID_B1 SINE B4 81 224 0 5 677 271 191 0 0 chrX 12187481 12187528 -154462768 + B1F SINE Alu 14 60 -89 5 677 2156 91 20 65 chrX 12187528 12187869 -154462427 - ORR1A3 LTR MaLR 0 326 1 5 677 1907 78 15 0 chrX 12187894 12188164 -154462132 + ORR1A2 LTR MaLR 46 319 -8 5 677 4053 158 98 12 chrX 12188165 12189085 -154461211 - ORR1A4-int LTR MaLR -964 999 1 5 677 1857 163 31 0 chrX 12189085 12189404 -154460892 - ORR1A4 LTR MaLR 0 329 1 5 677 248 219 96 0 chrX 12189494 12189567 -154460729 + L1MEd LINE L1 49 128 -5991 5 84 525 332 74 33 chrX 12189645 12189723 -154460573 + L1MEd LINE L1 305 382 -5737 5 678 1882 126 31 12 chrX 12189723 12190044 -154460252 - ORR1A4 LTR MaLR 0 329 3 5 678 525 332 74 33 chrX 12190044 12190358 -154459938 + L1MEd LINE L1 383 713 -5406 5 678 349 255 17 43 chrX 12190869 12190984 -154459312 + PB1D10 SINE Alu 1 112 -5 5 678 507 104 121 30 chrX 12191233 12191332 -154458964 - B1_Mur2 SINE Alu -1 148 41 5 678 237 214 57 0 chrX 12191785 12191855 -154458441 - ID4 SINE ID -9 74 1 5 678 1242 41 0 0 chrX 12191991 12192138 -154458158 - B1_Mus1 SINE Alu 0 148 2 5 678 802 104 79 36 chrX 12192255 12192395 -154457901 + B1_Mus1 SINE Alu 2 147 -1 5 678 21 0 0 0 chrX 12193585 12193606 -154456690 + AT_rich Low_complexity Low_complexity 1 21 0 5 678 311 127 0 72 chrX 12195186 12195257 -154455039 - B1F1 SINE Alu -56 64 1 5 678 487 211 17 50 chrX 12195265 12195385 -154454911 - ID_B1 SINE B4 -1 223 108 5 678 7121 92 61 26 chrX 12195396 12196503 -154453793 - Lx3B LINE L1 -1 6972 5827 5 678 216 0 0 0 chrX 12196908 12196932 -154453364 + (TTC)n Simple_repeat Simple_repeat 2 25 0 5 678 22746 91 25 10 chrX 12197408 12199757 -154450539 - L1_Mur1 LINE L1 -41 5845 3486 5 678 189 0 0 0 chrX 12199764 12199785 -154450511 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5 678 1130 70 0 20 chrX 12199785 12199923 -154450373 - B1_Mus2 SINE Alu -9 138 1 5 678 22746 91 25 10 chrX 12199923 12200876 -154449420 - L1_Mur1 LINE L1 -2401 3485 2492 5 678 216 256 0 0 chrX 12200879 12200922 -154449374 - ID SINE ID -179 45 3 5 678 536 225 214 0 chrX 12201770 12201948 -154448348 - L1MC4a LINE L1 -208 7674 7459 5 678 438 285 14 49 chrX 12201958 12202058 -154448238 + RSINE1 SINE B4 21 119 -46 5 678 2540 148 144 9 chrX 12202058 12202523 -154447773 - RLTR11A LTR ERVK 0 528 1 5 678 438 285 14 49 chrX 12202523 12202566 -154447730 + RSINE1 SINE B4 120 159 -6 5 678 21 0 0 0 chrX 12202642 12202663 -154447633 + GC_rich Low_complexity Low_complexity 1 21 0 5 678 384 300 40 40 chrX 12202675 12202873 -154447423 - RMER15 LTR ERVL -42 533 336 5 678 228 196 54 0 chrX 12203478 12203534 -154446762 - Lx7 LINE L1 -9 7451 7393 5 678 633 115 62 0 chrX 12203634 12203730 -154446566 + Lx7 LINE L1 7238 7339 -357 5 678 4802 169 59 68 chrX 12203724 12204478 -154445818 - Lx7 LINE L1 -1607 6089 5308 5 678 1329 75 37 21 chrX 12204478 12204668 -154445628 + B2_Mm2 SINE B2 2 194 -1 5 678 4802 169 64 66 chrX 12204668 12205150 -154445146 - Lx7 LINE L1 -573 5307 4863 5 678 1234 35 0 0 chrX 12205150 12205294 -154445002 + B1_Mus2 SINE Alu 2 145 -2 5 678 4802 169 64 66 chrX 12205294 12205326 -154444970 - Lx7 LINE L1 -1018 4862 4831 5 678 4377 42 75 4 chrX 12205456 12206004 -154444292 + LTRIS_Mus LTR ERV1 1 587 0 5 678 379 282 39 0 chrX 12206296 12206399 -154443897 - B1F1 SINE Alu -39 110 4 5 678 268 296 136 77 chrX 12206400 12206620 -154443676 + Charlie10 DNA MER1_type 110 342 -2480 5 678 779 159 0 42 chrX 12206628 12206772 -154443524 - B1_Mur3 SINE Alu 0 149 12 5 678 487 254 49 8 chrX 12206780 12206903 -154443393 - B1F1 SINE Alu -9 140 13 5 678 1163 70 0 0 chrX 12207051 12207194 -154443102 + B1_Mus2 SINE Alu 5 147 0 5 678 265 234 118 52 chrX 12207196 12207349 -154442947 + Charlie10 DNA MER1_type 2362 2524 -298 5 678 333 0 0 0 chrX 12207350 12207387 -154442909 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 678 525 208 166 4 chrX 12207389 12207574 -154442722 - B4 SINE B4 -26 266 44 5 678 283 206 99 25 chrX 12207633 12207816 -154442480 + MER5C DNA MER1_type 151 287 -26 5 678 364 238 11 34 chrX 12207816 12207935 -154442361 + B3 SINE B2 1 211 -5 5 678 422 275 55 27 chrX 12208154 12208300 -154441996 + RSINE1 SINE B4 3 152 -13 5 678 517 273 21 14 chrX 12208354 12208499 -154441797 + B1F2 SINE Alu 2 147 -2 5 678 393 271 264 16 chrX 12208562 12208684 -154441612 + B3A SINE B2 3 156 -42 5 678 267 269 0 0 chrX 12208693 12208760 -154441536 + B3A SINE B2 1 67 -131 5 678 569 287 6 24 chrX 12208771 12208939 -154441357 + B3 SINE B2 29 193 -23 5 678 611 180 47 54 chrX 12208991 12209120 -154441176 - B1_Mur1 SINE Alu -20 129 2 5 678 339 25 0 0 chrX 12209571 12209611 -154440685 + (TTA)n Simple_repeat Simple_repeat 3 42 0 5 678 359 253 22 11 chrX 12209643 12209735 -154440561 - RSINE1 SINE B4 -47 118 26 5 678 987 201 25 15 chrX 12210029 12210226 -154440070 - B3 SINE B2 -2 214 16 5 678 288 235 15 0 chrX 12210248 12210316 -154439980 + ID4 SINE ID 10 78 -5 5 678 510 86 0 0 chrX 12210316 12210397 -154439899 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 5 678 326 250 0 0 chrX 12210497 12210565 -154439731 - MLT2C2 LTR ERVL -178 286 219 5 678 4468 60 7 0 chrX 12210620 12211529 -154438767 + L1VL4 LINE L1 401 1317 -2242 5 678 312 215 89 0 chrX 12211663 12211742 -154438554 + ORR1D2-int LTR MaLR 50 135 -1235 5 678 1154 61 0 7 chrX 12211766 12211914 -154438382 - B1_Mm SINE Alu 0 147 1 5 678 1407 80 0 21 chrX 12211923 12212114 -154438182 - B2_Mm2 SINE B2 -7 188 2 5 678 2104 206 67 106 chrX 12212144 12212483 -154437813 - RLTR40 LTR ERVK -34 783 496 5 678 1781 36 18 5 chrX 12212483 12212706 -154437590 - L1Md_F3 LINE L1 -1 6583 6358 5 678 2104 206 67 106 chrX 12212706 12213177 -154437119 - RLTR40 LTR ERVK -322 495 5 5 678 1416 243 164 65 chrX 12213222 12213789 -154436507 + ORR1D2-int LTR MaLR 216 838 -532 5 678 1243 208 151 56 chrX 12213799 12214324 -154435972 + RMER19C LTR ERVK 1 611 0 5 678 1981 180 109 34 chrX 12214324 12214636 -154435660 + ORR1D2-int LTR MaLR 889 1234 -136 5 678 1386 87 5 0 chrX 12214636 12214820 -154435476 + B2_Mm2 SINE B2 2 186 -9 5 678 1981 180 109 34 chrX 12214820 12214955 -154435341 + ORR1D2-int LTR MaLR 1235 1370 0 5 678 1510 223 65 3 chrX 12214961 12215299 -154434997 + ORR1D2 LTR MaLR 8 366 -4 5 678 529 215 0 94 chrX 12215334 12215483 -154434813 + ORR1B2 LTR MaLR 1 135 -232 5 678 686 199 0 42 chrX 12215500 12215642 -154434654 - B1_Mus1 SINE Alu -1 147 12 5 678 205 243 0 0 chrX 12215648 12215685 -154434611 + polypyrimidine Low_complexity Low_complexity 1 37 0 5 678 758 223 0 0 chrX 12215685 12215824 -154434472 - B1_Mur1 SINE Alu -8 141 3 5 678 498 261 31 6 chrX 12216008 12216170 -154434126 + L1MC4 LINE L1 6959 7124 -918 5 678 281 217 290 11 chrX 12216349 12216442 -154433854 + RSINE1 SINE B4 2 120 -45 5 678 294 276 58 0 chrX 12216587 12216674 -154433622 + L1MC4 LINE L1 7478 7569 -473 5 678 466 159 97 60 chrX 12216679 12216813 -154433483 + B1_Mur4 SINE Alu 11 149 -1 5 678 218 266 31 0 chrX 12217127 12217191 -154433105 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 5 678 1147 68 0 7 chrX 12217216 12217363 -154432933 + B1_Mus2 SINE Alu 2 147 0 5 678 275 321 44 35 chrX 12218017 12218130 -154432166 + LTR33C LTR ERVL 178 291 -338 5 678 1426 174 132 12 chrX 12218144 12218217 -154432079 + ORR1C2 LTR MaLR 19 97 -287 5 678 3113 58 15 2 chrX 12218217 12218612 -154431684 + MTB LTR MaLR 1 400 0 5 678 1426 174 132 12 chrX 12218612 12218864 -154431432 + ORR1C2 LTR MaLR 98 383 -1 5 678 361 260 0 0 chrX 12219075 12219152 -154431144 - PB1D10 SINE Alu -5 112 36 5 678 203 206 0 93 chrX 12219659 12219734 -154430562 + T-rich Low_complexity Low_complexity 1 68 0 5 678 378 55 56 5 chrX 12219750 12219811 -154430485 - B2_Mm2 SINE B2 -108 108 47 5 678 1322 79 11 0 chrX 12219839 12220016 -154430280 - B2_Mm1t SINE B2 -14 179 1 5 678 688 148 29 22 chrX 12220022 12220160 -154430136 - Lx3B LINE L1 -21 6952 6814 5 678 865 60 98 63 chrX 12220209 12220352 -154429944 - B1_Mus1 SINE Alu 0 148 1 5 678 391 301 80 36 chrX 12220364 12220502 -154429794 - B4 SINE B4 -69 223 80 5 678 231 357 14 0 chrX 12220548 12220618 -154429678 - B3A SINE B2 -80 118 48 5 678 705 157 21 14 chrX 12220628 12220770 -154429526 - B1_Mur2 SINE Alu 0 149 7 5 678 1066 69 14 7 chrX 12220792 12220938 -154429358 - B1_Mm SINE Alu 0 147 1 5 678 455 200 0 43 chrX 12220966 12221060 -154429236 - B4 SINE B4 -200 92 3 5 678 238 262 16 32 chrX 12221101 12221164 -154429132 + ID2 SINE ID 18 79 -4 5 678 1269 93 43 11 chrX 12221194 12221378 -154428918 - B2_Mm2 SINE B2 -5 190 1 5 678 309 250 0 1 chrX 12221504 12221590 -154428706 + MER34A LTR ERV1 7 91 -480 5 678 297 170 198 33 chrX 12221816 12221907 -154428389 + MER34A LTR ERV1 437 542 0 5 678 699 253 139 8 chrX 12222650 12222909 -154427387 + L1MC4 LINE L1 7182 7474 -568 5 678 544 268 32 7 chrX 12222928 12223082 -154427214 - MLT1A1 LTR MaLR 0 408 251 5 678 441 290 109 53 chrX 12223080 12223382 -154426914 + MT2A LTR ERVL 40 358 -175 5 678 267 242 30 59 chrX 12223375 12223476 -154426820 - PB1D10 SINE Alu -17 100 3 5 678 323 219 36 12 chrX 12223394 12223477 -154426819 - ID_B1 SINE B4 -57 167 83 5 678 596 209 18 0 chrX 12223526 12223636 -154426660 - PB1D9 SINE Alu -8 112 1 5 678 2431 175 61 7 chrX 12223754 12224198 -154426098 + RMER1B Other Other 599 1066 0 5 678 308 268 12 0 chrX 12224216 12224298 -154425998 + ID_B1 SINE B4 105 187 -37 5 678 1448 84 11 0 chrX 12224418 12224609 -154425687 + B2_Mm1t SINE B2 1 193 0 6 678 925 196 328 3 chrX 12224852 12225114 -154425182 + MT2A LTR ERVL 134 489 -44 6 678 525 32 0 0 chrX 12225114 12225177 -154425119 + (TA)n Simple_repeat Simple_repeat 2 64 0 6 678 925 196 328 3 chrX 12225177 12225216 -154425080 + MT2A LTR ERVL 490 533 0 6 678 1013 268 102 101 chrX 12225307 12225922 -154424374 - RLTR18 LTR ERVK 0 616 1 6 678 198 128 0 0 chrX 12225940 12225979 -154424317 + (T)n Simple_repeat Simple_repeat 1 39 0 6 678 1180 68 0 7 chrX 12225979 12226128 -154424168 - B1_Mus1 SINE Alu 0 148 1 6 678 1025 213 25 0 chrX 12226249 12226451 -154423845 - B3 SINE B2 -8 208 2 6 678 1310 96 11 21 chrX 12226499 12226690 -154423606 + B2_Mm1t SINE B2 2 190 -3 6 678 1062 96 7 0 chrX 12226751 12226897 -154423399 + B1_Mus1 SINE Alu 2 148 0 6 678 273 57 0 0 chrX 12226897 12226932 -154423364 + (A)n Simple_repeat Simple_repeat 1 35 0 6 678 508 306 13 20 chrX 12226932 12227082 -154423214 + B3A SINE B2 27 175 -23 6 678 2049 203 48 151 chrX 12227365 12227540 -154422756 + RMER1C Other Other 760 927 -415 6 678 1242 34 0 0 chrX 12227540 12227687 -154422609 + B1_Mus2 SINE Alu 1 147 0 6 678 2049 203 48 151 chrX 12227687 12228160 -154422136 + RMER1C Other Other 928 1341 -1 6 678 239 145 57 14 chrX 12228419 12228489 -154421807 + A-rich Low_complexity Low_complexity 2 74 0 6 678 1693 26 0 0 chrX 12228775 12228967 -154421329 + B2_Mm1t SINE B2 2 193 0 6 678 257 333 96 35 chrX 12231090 12231289 -154419007 - MLT1F1 LTR MaLR -241 328 118 6 678 2965 68 13 2 chrX 12232402 12232798 -154417498 + MTB LTR MaLR 1 400 0 6 678 362 250 95 9 chrX 12233965 12234070 -154416226 - PB1 SINE Alu 0 127 14 6 678 744 190 13 47 chrX 12234713 12234862 -154415434 - B1_Mur1 SINE Alu -1 148 5 6 678 360 0 0 0 chrX 12235430 12235470 -154414826 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 678 827 104 79 8 chrX 12236134 12236260 -154414036 - B1_Mur4 SINE Alu -15 135 1 6 678 940 198 84 25 chrX 12236322 12236524 -154413772 - B3 SINE B2 0 216 3 6 678 233 113 111 19 chrX 12236527 12236581 -154413715 - Lx7 LINE L1 -1911 5785 5727 6 678 1346 83 22 0 chrX 12236873 12237054 -154413242 + B2_Mm1t SINE B2 2 186 -7 6 678 587 215 37 0 chrX 12237874 12238009 -154412287 + ID_B1 SINE B4 84 223 -1 6 678 1228 48 0 0 chrX 12238151 12238298 -154411998 - B1_Mus2 SINE Alu 0 147 1 6 678 1108 161 259 48 chrX 12239239 12239308 -154410988 + MTD LTR MaLR 4 79 -340 6 678 1088 57 42 21 chrX 12239308 12239452 -154410844 + B1_Mus2 SINE Alu 1 147 0 6 678 1108 161 259 48 chrX 12239452 12239714 -154410582 + MTD LTR MaLR 80 405 -14 6 678 994 75 0 14 chrX 12240002 12240150 -154410146 - L1Md_F2 LINE L1 -1 6581 6436 6 678 303 272 49 0 chrX 12240198 12240279 -154410017 - Lx8 LINE L1 -5 7468 7384 6 678 412 293 0 0 chrX 12240430 12240529 -154409767 + RSINE1 SINE B4 43 141 -24 6 678 180 0 0 0 chrX 12240895 12240915 -154409381 + (CAG)n Simple_repeat Simple_repeat 1 20 0 6 678 440 279 21 42 chrX 12240964 12241106 -154409190 - B1F SINE Alu -1 148 10 6 678 2065 33 4 0 chrX 12241126 12241370 -154408926 - L1_Mus1 LINE L1 0 6567 6323 6 678 391 314 7 48 chrX 12241454 12241601 -154408695 + B1_Mur2 SINE Alu 5 145 -4 6 678 497 259 92 35 chrX 12241797 12242071 -154408225 + ORR1D1 LTR MaLR 54 359 0 6 678 314 258 109 66 chrX 12242509 12242646 -154407650 - MER102b DNA MER1_type -69 272 130 6 678 536 280 44 6 chrX 12242691 12242849 -154407447 + RSINE1 SINE B4 2 165 0 6 678 690 192 0 0 chrX 12242895 12243020 -154407276 + B3 SINE B2 86 210 -6 6 678 330 271 72 36 chrX 12243077 12243188 -154407108 + PB1D10 SINE Alu 1 115 -2 6 678 713 217 427 0 chrX 12243250 12243532 -154406764 + MTD LTR MaLR 17 419 0 6 678 2554 213 221 68 chrX 12243532 12244526 -154405770 + MTD-int LTR MaLR 1 1142 -116 6 678 1498 49 5 11 chrX 12244526 12244713 -154405583 + B2_Mm1a SINE B2 1 186 -7 6 678 2554 213 221 68 chrX 12244713 12244806 -154405490 + MTD-int LTR MaLR 1143 1255 -3 6 678 727 222 251 12 chrX 12244806 12245134 -154405162 + MTD LTR MaLR 6 411 -8 6 678 1178 69 0 0 chrX 12245164 12245309 -154404987 + B1_Mus2 SINE Alu 1 145 -2 6 678 221 0 0 33 chrX 12245309 12245339 -154404957 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 678 342 0 0 0 chrX 12245447 12245485 -154404811 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 678 618 251 74 115 chrX 12245485 12245728 -154404568 - B4A SINE B4 -59 233 1 6 678 1459 65 16 5 chrX 12245737 12245924 -154404372 - B2_Mm2 SINE B2 -6 189 1 6 678 1843 159 45 6 chrX 12246014 12246367 -154403929 + ORR1B2 LTR MaLR 1 367 0 6 678 382 235 0 0 chrX 12247019 12247100 -154403196 - B1_Mur2 SINE Alu 0 149 69 6 678 24 0 0 0 chrX 12247867 12247891 -154402405 + AT_rich Low_complexity Low_complexity 1 24 0 6 678 23 0 0 0 chrX 12248077 12248100 -154402196 + AT_rich Low_complexity Low_complexity 1 23 0 6 678 1596 112 78 7 chrX 12248833 12249102 -154401194 - MTC LTR MaLR -133 288 1 6 678 351 269 0 46 chrX 12249457 12249566 -154400730 - MTC LTR MaLR -317 104 1 6 678 386 259 94 13 chrX 12251537 12251686 -154398610 + MIR SINE MIR 99 259 -3 6 678 279 0 0 0 chrX 12251932 12251963 -154398333 + (CAAAT)n Simple_repeat Simple_repeat 4 34 0 6 678 355 203 15 46 chrX 12252076 12252199 -154398097 + PB1D10 SINE Alu 3 116 -1 6 678 189 0 0 0 chrX 12253453 12253474 -154396822 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 6 678 21 0 0 0 chrX 12254324 12254345 -154395951 + AT_rich Low_complexity Low_complexity 1 21 0 6 678 368 286 9 18 chrX 12255530 12255644 -154394652 - PB1D10 SINE Alu -4 113 1 6 678 204 290 28 28 chrX 12256034 12256105 -154394191 + (CATG)n Simple_repeat Simple_repeat 3 73 0 6 678 695 258 0 89 chrX 12258776 12258989 -154391307 + B3A SINE B2 2 195 -3 6 678 524 237 111 0 chrX 12258996 12259131 -154391165 + B3A SINE B2 2 151 -47 6 678 213 65 0 0 chrX 12259156 12259187 -154391109 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 6 678 494 204 10 0 chrX 12259242 12259345 -154390951 + B3 SINE B2 84 187 -29 6 678 217 185 241 0 chrX 12259695 12259749 -154390547 + ID2 SINE ID 1 67 -16 6 678 363 309 135 47 chrX 12259960 12260279 -154390017 + MLT1B LTR MaLR 1 347 -43 6 678 982 116 79 0 chrX 12260613 12260777 -154389519 - B2_Mm1a SINE B2 -2 191 15 6 678 361 91 0 0 chrX 12260774 12260829 -154389467 - B1_Mus2 SINE Alu -91 56 2 6 678 224 236 178 14 chrX 12260851 12260924 -154389372 + PB1D9 SINE Alu 21 105 -15 6 678 24 32 0 0 chrX 12260945 12260976 -154389320 + AT_rich Low_complexity Low_complexity 1 31 0 6 678 846 83 40 46 chrX 12261784 12261936 -154388360 + B2_Mm2 SINE B2 45 195 0 6 678 667 201 94 12 chrX 12261946 12262117 -154388179 + B3 SINE B2 28 212 -4 6 678 32 81 0 0 chrX 12262130 12262204 -154388092 + AT_rich Low_complexity Low_complexity 1 74 0 6 678 28 79 0 0 chrX 12263544 12263607 -154386689 + AT_rich Low_complexity Low_complexity 1 63 0 6 678 854 197 0 0 chrX 12264498 12264640 -154385656 - B1_Mur3 SINE Alu -7 142 1 6 678 329 278 61 66 chrX 12265043 12265255 -154385041 + L1M5 LINE L1 5361 5571 -553 6 678 180 0 0 0 chrX 12265613 12265633 -154384663 + (TG)n Simple_repeat Simple_repeat 2 21 0 6 678 821 190 117 21 chrX 12265671 12265859 -154384437 + B3 SINE B2 8 213 -3 6 678 323 223 125 10 chrX 12265959 12266063 -154384233 + PB1D10 SINE Alu 1 116 -1 6 678 371 38 19 0 chrX 12266655 12266708 -154383588 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 6 678 341 320 136 19 chrX 12266907 12267404 -154382892 - L2a LINE L2 -40 3386 2785 6 678 320 325 35 29 chrX 12267632 12267806 -154382490 - L2a LINE L2 -944 2475 2301 6 678 635 190 93 26 chrX 12268015 12268166 -154382130 + MIR SINE MIR 78 238 -24 6 678 330 26 0 0 chrX 12268686 12268725 -154381571 + (TAA)n Simple_repeat Simple_repeat 3 41 0 6 678 290 307 53 0 chrX 12269404 12269479 -154380817 + ID4 SINE ID 1 79 -4 6 678 308 276 0 50 chrX 12269586 12269666 -154380630 - ID4_ SINE ID 0 83 8 6 678 216 343 0 14 chrX 12269751 12269822 -154380474 - ID_B1 SINE B4 -71 153 84 6 678 228 339 0 0 chrX 12269761 12269823 -154380473 - PB1 SINE Alu -64 63 2 6 678 466 250 28 42 chrX 12270220 12270362 -154379934 + ID_B1 SINE B4 77 216 -8 6 678 317 232 18 100 chrX 12271469 12271481 -154378815 + MT2B LTR ERVL 155 157 -444 6 678 632 187 30 7 chrX 12271481 12271616 -154378680 + B1_Mur2 SINE Alu 4 141 -8 6 678 297 128 0 0 chrX 12272178 12272225 -154378071 + (GGA)n Simple_repeat Simple_repeat 2 48 0 6 678 634 319 0 0 chrX 12273500 12273657 -154376639 - RSINE1 SINE B4 0 165 9 6 678 390 234 108 46 chrX 12273938 12274068 -154376228 - B1F2 SINE Alu -10 139 2 6 678 284 342 0 26 chrX 12274138 12274252 -154376044 + PB1D10 SINE Alu 7 117 0 6 678 655 289 160 0 chrX 12274271 12274496 -154375800 + B4A SINE B4 9 269 -23 6 678 348 83 0 0 chrX 12274525 12274573 -154375723 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 678 428 362 49 45 chrX 12274853 12275099 -154375197 - B4A SINE B4 -43 249 3 6 678 483 238 208 7 chrX 12275389 12275533 -154374763 + B3 SINE B2 17 189 -27 6 678 8559 189 96 34 chrX 12275586 12276628 -154373668 + MYSERV16_I-int LTR ERVK 1 1100 -1226 6 678 1217 48 0 0 chrX 12276628 12276775 -154373521 - B1_Mus2 SINE Alu 0 147 1 6 678 8559 189 96 34 chrX 12276775 12277783 -154372513 + MYSERV16_I-int LTR ERVK 1101 2179 -147 6 678 2683 163 77 14 chrX 12277888 12278379 -154371917 + RLTR11A LTR ERVK 1 522 -6 7 678 497 259 68 72 chrX 12278990 12279297 -154370999 + L1MEg LINE L1 1394 1755 -752 7 678 677 282 152 13 chrX 12279298 12279535 -154370761 + MTEa LTR MaLR 1 270 -109 7 678 231 36 0 0 chrX 12279677 12279705 -154370591 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 7 678 219 244 0 41 chrX 12281483 12281581 -154368715 - B3A SINE B2 -89 127 1 7 678 425 245 75 64 chrX 12281995 12282180 -154368116 - B3 SINE B2 -9 186 2 7 678 215 328 0 0 chrX 12282481 12282539 -154367757 - B1F2 SINE Alu -88 61 4 7 678 24 0 0 0 chrX 12283061 12283085 -154367211 + AT_rich Low_complexity Low_complexity 1 24 0 7 678 460 277 106 62 chrX 12284282 12284490 -154365806 - MER20 DNA MER1_type -2 217 1 7 678 22 0 0 0 chrX 12284517 12284539 -154365757 + AT_rich Low_complexity Low_complexity 1 22 0 7 678 245 304 24 60 chrX 12285469 12285553 -154364743 + PB1D10 SINE Alu 7 87 -30 7 678 215 353 48 71 chrX 12285616 12285784 -154364512 + ID_B1 SINE B4 59 222 -2 7 678 397 262 75 0 chrX 12286297 12286377 -154363919 - RSINE1 SINE B4 -18 147 62 7 678 215 188 42 0 chrX 12286507 12286555 -154363741 + (CAGA)n Simple_repeat Simple_repeat 1 50 0 7 678 1216 110 21 16 chrX 12286898 12287092 -154363204 - ORR1A4 LTR MaLR -2 327 133 7 678 264 220 0 33 chrX 12287429 12287490 -154362806 + B3 SINE B2 150 208 -8 7 678 594 41 0 0 chrX 12287844 12287917 -154362379 + (GAAA)n Simple_repeat Simple_repeat 2 74 0 7 678 372 22 0 0 chrX 12288607 12288653 -154361643 + L1Md_F2 LINE L1 6518 6563 -19 7 678 765 0 0 0 chrX 12288655 12288740 -154361556 + (GGGAGA)n Simple_repeat Simple_repeat 2 86 0 7 678 488 327 33 7 chrX 12289011 12289162 -154361134 - ID_B1 SINE B4 -69 155 1 7 678 439 284 0 0 chrX 12289363 12289472 -154360824 - PB1D7 SINE Alu -10 110 2 7 678 1212 56 0 42 chrX 12291965 12292133 -154358163 + B2_Mm2 SINE B2 1 161 -34 7 678 548 299 14 7 chrX 12292170 12292308 -154357988 + ID_B1 SINE B4 85 223 -1 7 678 570 204 284 0 chrX 12292390 12292552 -154357744 - B3 SINE B2 -7 209 2 7 678 1147 35 14 14 chrX 12292569 12292714 -154357582 - B1_Mus1 SINE Alu -2 146 2 7 678 212 217 67 80 chrX 12293445 12293520 -154356776 + PB1D9 SINE Alu 21 94 -26 7 678 223 204 36 18 chrX 12293582 12293637 -154356659 + ID4_ SINE ID 19 74 -9 7 678 394 275 31 123 chrX 12293733 12293751 -154356545 + B4A SINE B4 75 77 -215 7 678 683 250 0 13 chrX 12293751 12293901 -154356395 + B1_Mus1 SINE Alu 1 148 0 7 678 216 0 0 0 chrX 12293912 12293936 -154356360 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 7 678 248 269 80 44 chrX 12294516 12294629 -154355667 - PB1D10 SINE Alu 0 117 1 7 678 326 291 13 107 chrX 12294908 12294980 -154355316 + B1F SINE Alu 6 63 -86 7 678 747 229 78 26 chrX 12294980 12295173 -154355123 + B3 SINE B2 1 203 -13 7 678 326 291 13 107 chrX 12295173 12295250 -154355046 + B1F SINE Alu 64 141 -8 7 678 286 197 29 57 chrX 12295263 12295333 -154354963 + ID4_ SINE ID 15 82 -1 7 678 652 223 0 39 chrX 12295437 12295591 -154354705 - B1_Mus1 SINE Alu 0 148 1 7 678 752 164 0 0 chrX 12296980 12297096 -154353200 + B1_Mur4 SINE Alu 1 116 -34 7 678 712 158 48 41 chrX 12297291 12297436 -154352860 + B1_Mur4 SINE Alu 5 150 0 7 678 307 168 267 0 chrX 12297460 12297561 -154352735 + Lx9 LINE L1 7369 7496 -148 7 678 1270 91 6 0 chrX 12297654 12297830 -154352466 + B2_Mm1t SINE B2 3 179 -14 7 678 38 39 0 0 chrX 12297834 12297886 -154352410 + AT_rich Low_complexity Low_complexity 1 52 0 7 678 253 361 143 34 chrX 12298147 12298322 -154351974 + Charlie10 DNA MER1_type 105 298 -2524 7 678 444 217 37 19 chrX 12298366 12298474 -154351822 - B1_Mur1 SINE Alu 0 149 40 7 678 351 154 0 0 chrX 12298474 12298539 -154351757 + CT-rich Low_complexity Low_complexity 4 68 0 7 678 291 304 0 11 chrX 12298558 12298651 -154351645 + B4 SINE B4 59 150 -142 7 678 407 123 0 0 chrX 12298590 12298655 -154351641 + B1_Mur3 SINE Alu 5 69 -80 7 678 409 231 148 69 chrX 12298673 12298934 -154351362 + Charlie10 DNA MER1_type 2070 2409 -413 7 678 440 167 270 9 chrX 12298934 12299049 -154351247 + B1_Mm SINE Alu 2 146 -1 7 678 409 229 139 82 chrX 12299049 12299096 -154351200 + Charlie10 DNA MER1_type 2410 2448 -374 7 678 235 264 194 0 chrX 12299127 12299199 -154351097 - PB1D10 SINE Alu -11 106 21 7 678 461 250 90 15 chrX 12299455 12299589 -154350707 - B1F2 SINE Alu -4 145 2 7 678 472 261 167 35 chrX 12299644 12299902 -154350394 + L1M5 LINE L1 5389 5680 -499 7 678 375 221 134 52 chrX 12299977 12300149 -154350147 + L1MB8 LINE L1 5804 5989 -189 7 678 535 282 46 0 chrX 12300287 12300418 -154349878 + ID_B1 SINE B4 86 222 -2 7 678 939 134 14 0 chrX 12301602 12301744 -154348552 + URR1A DNA MER1_type 1 144 -82 7 678 1214 84 45 6 chrX 12301744 12301923 -154348373 + B2_Mm2 SINE B2 2 187 -8 7 678 536 137 21 0 chrX 12301922 12302017 -154348279 + URR1A DNA MER1_type 129 225 -1 7 678 236 333 90 16 chrX 12302039 12302161 -154348135 + MLT1A0 LTR MaLR 179 309 -56 7 678 613 218 67 8 chrX 12303796 12303930 -154346366 + B1_Mur1 SINE Alu 1 142 -7 7 678 29 0 0 0 chrX 12303931 12303960 -154346336 + AT_rich Low_complexity Low_complexity 1 29 0 7 678 225 0 0 0 chrX 12304157 12304182 -154346114 + (A)n Simple_repeat Simple_repeat 1 25 0 7 678 382 112 162 0 chrX 12304182 12304251 -154346045 - B1_Mur4 SINE Alu -9 141 62 7 678 1599 37 0 0 chrX 12304520 12304711 -154345585 + B2_Mm1a SINE B2 2 192 -1 7 678 955 249 0 36 chrX 12304879 12305071 -154345225 + B3 SINE B2 2 186 -30 7 678 342 0 0 0 chrX 12305071 12305109 -154345187 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 678 252 0 0 0 chrX 12305609 12305637 -154344659 + (CCCCCG)n Simple_repeat Simple_repeat 1 28 0 7 678 456 188 97 24 chrX 12305646 12305763 -154344533 - PB1D9 SINE Alu 0 120 1 7 678 1520 63 0 11 chrX 12305900 12306091 -154344205 - B2_Mm1a SINE B2 -3 190 2 7 678 476 202 140 0 chrX 12306486 12306600 -154343696 - B1F SINE Alu -8 141 12 7 678 2223 199 45 46 chrX 12306600 12307278 -154343018 + RMER6A LTR ERVK 1 756 0 7 678 290 347 0 0 chrX 12307552 12307627 -154342669 - ID4_ SINE ID -2 81 7 7 678 661 62 10 0 chrX 12307667 12307764 -154342532 + L1_Mus1 LINE L1 6451 6548 -19 7 678 218 231 13 13 chrX 12307778 12307857 -154342439 + A-rich Low_complexity Low_complexity 6 84 0 7 678 368 210 56 74 chrX 12308548 12308656 -154341640 + PB1D9 SINE Alu 14 119 -1 7 678 357 231 89 129 chrX 12309054 12309178 -154341118 + B1_Mur1 SINE Alu 3 121 -28 7 678 510 305 11 92 chrX 12309200 12309384 -154340912 - ID_B1 SINE B4 -54 170 2 7 678 673 211 23 0 chrX 12309565 12309698 -154340598 + B1_Mus2 SINE Alu 1 136 -11 7 678 275 209 209 0 chrX 12309747 12309833 -154340463 + L1M4 LINE L1 4910 5013 -1133 7 678 210 67 0 0 chrX 12309951 12309964 -154340332 + (A)n Simple_repeat Simple_repeat 1 13 0 7 678 414 319 28 0 chrX 12309964 12310108 -154340188 + B1F2 SINE Alu 2 149 0 7 678 210 67 0 0 chrX 12310108 12310124 -154340172 + (A)n Simple_repeat Simple_repeat 1 16 0 7 678 232 391 46 0 chrX 12310126 12310213 -154340083 + PB1D9 SINE Alu 3 93 -27 7 678 1079 247 266 5 chrX 12310309 12311015 -154339281 + L1MB8 LINE L1 5211 6120 -58 7 678 486 225 40 32 chrX 12312371 12312495 -154337801 - B1F SINE Alu -10 139 15 7 678 206 286 44 55 chrX 12312644 12312825 -154337471 + T-rich Low_complexity Low_complexity 1 179 0 7 678 1430 50 22 6 chrX 12312842 12313025 -154337271 + B2_Mm1t SINE B2 2 187 -6 7 678 371 241 258 6 chrX 12313571 12313738 -154336558 + B3 SINE B2 3 211 -5 7 678 580 302 112 0 chrX 12313903 12314118 -154336178 - MMAR1 DNA Mariner -946 340 102 7 678 1202 41 7 0 chrX 12314118 12314264 -154336032 + B1_Mm SINE Alu 1 147 0 7 678 462 298 38 15 chrX 12314312 12314445 -154335851 + RSINE1 SINE B4 30 165 0 7 678 405 0 0 0 chrX 12314461 12314506 -154335790 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 678 30 27 0 0 chrX 12314604 12314641 -154335655 + AT_rich Low_complexity Low_complexity 1 37 0 7 678 1042 115 0 0 chrX 12314644 12314792 -154335504 + B1_Mus1 SINE Alu 1 148 0 7 678 245 250 0 100 chrX 12314796 12314876 -154335420 - MMAR1 DNA Mariner -1214 72 1 7 678 513 251 114 57 chrX 12314876 12315471 -154334825 + L1MB3 LINE L1 3097 3748 -2132 7 678 1116 62 0 14 chrX 12315779 12315927 -154334369 + B1_Mus2 SINE Alu 2 147 0 7 678 1038 46 0 0 chrX 12316977 12317108 -154333188 - B1_Mus2 SINE Alu -8 139 9 7 678 560 164 169 16 chrX 12317405 12317529 -154332767 - B1_Mus1 SINE Alu -4 144 2 7 678 466 296 49 0 chrX 12317826 12317988 -154332308 + L1MB3 LINE L1 3761 3930 -1950 7 678 222 315 0 18 chrX 12317988 12318043 -154332253 + ID SINE ID 7 60 -164 7 678 1031 117 0 0 chrX 12318046 12318191 -154332105 + B1_Mus2 SINE Alu 2 146 -1 7 678 225 0 0 0 chrX 12318191 12318216 -154332080 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7 678 250 316 38 0 chrX 12318224 12318303 -154331993 + B1F SINE Alu 56 137 -12 7 678 340 306 60 7 chrX 12318327 12318535 -154331761 + L1MB3 LINE L1 4464 4660 -1220 7 678 727 282 210 44 chrX 12318687 12319110 -154331186 + L1MB3 LINE L1 4648 5147 -700 7 678 1433 179 26 0 chrX 12319110 12319378 -154330918 + Lx3C LINE L1 6695 6969 -7 7 678 727 276 145 55 chrX 12319378 12320066 -154330230 + L1MB3 LINE L1 5148 6002 -181 7 678 220 275 0 92 chrX 12320191 12320267 -154330029 + B1_Mus1 SINE Alu 30 98 -50 7 678 874 208 126 0 chrX 12320283 12320466 -154329830 + B3 SINE B2 1 206 -10 7 678 27 0 0 0 chrX 12320504 12320531 -154329765 + AT_rich Low_complexity Low_complexity 1 27 0 8 84 1413 77 6 0 chrX 12320594 12320777 -154329519 - B2_Mm1t SINE B2 -8 185 2 8 679 598 192 105 35 chrX 12320792 12320992 -154329304 - L1MA6 LINE L1 -17 6283 6070 8 679 265 366 10 19 chrX 12321226 12321329 -154328967 + PB1D10 SINE Alu 1 102 -15 8 679 21 36 0 0 chrX 12322118 12322146 -154328150 + AT_rich Low_complexity Low_complexity 1 28 0 8 679 231 169 48 136 chrX 12322181 12322192 -154328104 + MT2B LTR ERVL 171 185 -416 8 679 691 235 34 39 chrX 12322192 12322400 -154327896 + ID_B1 SINE B4 1 207 -17 8 679 231 169 48 136 chrX 12322400 12322491 -154327805 + MT2B LTR ERVL 186 264 -337 8 679 500 131 11 45 chrX 12322409 12322497 -154327799 + B1_Mur2 SINE Alu 36 120 -29 8 679 23 54 0 0 chrX 12322817 12322854 -154327442 + AT_rich Low_complexity Low_complexity 1 37 0 8 679 320 227 13 13 chrX 12323475 12323551 -154326745 + ID4 SINE ID 1 76 -7 8 679 521 197 82 0 chrX 12324237 12324359 -154325937 - B1F2 SINE Alu -6 143 12 8 679 26 0 0 0 chrX 12324779 12324805 -154325491 + AT_rich Low_complexity Low_complexity 1 26 0 8 679 24 32 0 0 chrX 12325678 12325709 -154324587 + AT_rich Low_complexity Low_complexity 1 31 0 8 679 203 277 0 0 chrX 12326064 12326111 -154324185 + A-rich Low_complexity Low_complexity 1 47 0 8 679 271 308 103 0 chrX 12326606 12326684 -154323612 + MIR SINE MIR 13 98 -164 8 679 607 142 56 40 chrX 12326700 12326825 -154323471 - B1_Mus1 SINE Alu -17 131 5 8 679 233 215 40 137 chrX 12326721 12326845 -154323451 - MT2B LTR ERVL -337 264 153 8 679 217 283 138 21 chrX 12326848 12326942 -154323354 + MIR SINE MIR 135 239 -23 8 679 273 322 111 18 chrX 12327202 12327371 -154322925 - MIRc SINE MIR -61 207 31 8 679 1061 70 28 14 chrX 12327544 12327689 -154322607 - B1_Mus1 SINE Alu 0 148 2 8 679 960 209 4 102 chrX 12327959 12328194 -154322102 - B3 SINE B2 -3 213 2 8 679 214 275 65 104 chrX 12328227 12328243 -154322053 + B4A SINE B4 71 83 -209 8 679 337 282 54 76 chrX 12328243 12328335 -154321961 + PB1D10 SINE Alu 1 90 -27 8 679 890 289 117 47 chrX 12328484 12328869 -154321427 - MTD LTR MaLR 0 419 8 8 679 579 205 17 8 chrX 12329212 12329330 -154320966 - PB1D9 SINE Alu -1 119 1 8 679 315 0 0 0 chrX 12329365 12329400 -154320896 + (T)n Simple_repeat Simple_repeat 1 35 0 8 679 1097 74 0 26 chrX 12329400 12329552 -154320744 - B1_Mus1 SINE Alu 0 148 1 8 679 1098 83 14 0 chrX 12329702 12329847 -154320449 + B1_Mus2 SINE Alu 1 147 0 8 679 803 98 0 0 chrX 12330185 12330297 -154319999 + B1_Mus2 SINE Alu 36 147 0 8 679 250 329 82 48 chrX 12330406 12330553 -154319743 + MIRm SINE MIR 28 179 -97 8 679 894 132 184 0 chrX 12330601 12330791 -154319505 - URR1B DNA MER1_type 0 225 1 8 679 419 243 50 3 chrX 12331078 12331184 -154319112 - PB1D10 SINE Alu -3 124 7 8 679 198 0 0 0 chrX 12331750 12331772 -154318524 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 8 679 218 323 172 28 chrX 12331926 12332181 -154318115 - L3 LINE CR1 -811 3678 3387 8 679 1244 109 0 21 chrX 12332931 12333119 -154317177 + B2_Mm2 SINE B2 4 187 -8 8 679 363 175 336 10 chrX 12333855 12333959 -154316337 + B1_Mur2 SINE Alu 11 148 -1 8 679 296 312 9 44 chrX 12334795 12334909 -154315387 + PB1D10 SINE Alu 1 110 -7 8 679 478 126 113 106 chrX 12335335 12335461 -154314835 + B1_Mur3 SINE Alu 6 139 -10 8 679 198 0 0 0 chrX 12335461 12335483 -154314813 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 8 679 478 126 113 106 chrX 12335483 12335498 -154314798 + B1_Mur3 SINE Alu 140 148 -1 8 679 207 0 0 0 chrX 12335725 12335748 -154314548 + (TTG)n Simple_repeat Simple_repeat 2 24 0 8 679 977 31 8 0 chrX 12335810 12335938 -154314358 + B1_Mus2 SINE Alu 19 147 0 8 679 224 345 194 10 chrX 12335973 12336272 -154314024 - L2a LINE L2 -1 3425 3072 8 679 435 317 0 16 chrX 12336566 12336691 -154313605 - ID_B1 SINE B4 -11 213 91 8 679 234 288 25 33 chrX 12336585 12336707 -154313589 + YREP_Mm Unknown Unknown 205 325 -1487 8 679 543 220 58 36 chrX 12336827 12336964 -154313332 - B1_Mur2 SINE Alu -9 140 1 8 679 235 284 40 26 chrX 12336972 12337048 -154313248 - PB1D7 SINE Alu -6 114 38 8 679 194 237 63 38 chrX 12337098 12337177 -154313119 - L2a LINE L2 -1007 2412 2332 8 679 380 262 68 0 chrX 12337533 12337636 -154312660 + PB1D7 SINE Alu 1 110 -10 8 679 246 156 0 0 chrX 12338738 12338783 -154311513 + (CCG)n Simple_repeat Simple_repeat 2 46 0 8 679 217 280 48 48 chrX 12339823 12339947 -154310349 - MER5B DNA MER1_type -5 173 50 8 679 334 216 181 0 chrX 12340295 12340411 -154309885 - L1MA7 LINE L1 -24 6267 6131 8 679 240 292 66 53 chrX 12340436 12340512 -154309784 - ID4_ SINE ID -3 80 4 8 679 359 292 45 30 chrX 12340514 12340648 -154309648 - ID_B1 SINE B4 -3 221 86 8 679 689 224 71 9 chrX 12340726 12340938 -154309358 - L1MA7 LINE L1 -246 6045 5821 8 679 212 277 61 15 chrX 12340967 12341033 -154309263 - PB1D10 SINE Alu -20 97 29 8 679 298 224 36 84 chrX 12341132 12341215 -154309081 - L1MA7 LINE L1 -531 5781 5703 8 679 423 300 8 0 chrX 12341231 12341351 -154308945 + ID_B1 SINE B4 104 224 0 8 679 486 219 103 114 chrX 12341324 12341361 -154308935 + B4 SINE B4 47 219 -73 8 679 966 116 0 0 chrX 12341361 12341499 -154308797 + B1_Mur4 SINE Alu 6 143 -7 8 679 1606 16 27 0 chrX 12341508 12341691 -154308605 + B2_Mm1a SINE B2 2 189 -4 8 679 278 84 0 123 chrX 12341693 12341774 -154308522 + A-rich Low_complexity Low_complexity 1 71 0 8 679 554 244 102 35 chrX 12341783 12342000 -154308296 - L1MA7 LINE L1 -601 5690 5457 8 679 3840 96 11 146 chrX 12342000 12342544 -154307752 - MT2B LTR ERVL 0 601 86 8 679 1123 75 7 0 chrX 12342544 12342690 -154307606 + B1_Mus1 SINE Alu 2 148 0 8 679 3840 96 11 146 chrX 12342690 12342839 -154307457 - MT2B LTR ERVL -516 85 1 8 679 554 244 102 35 chrX 12342839 12342876 -154307420 - L1MA7 LINE L1 -835 5456 5419 8 679 1152 88 0 0 chrX 12342982 12343129 -154307167 + B1_Mus1 SINE Alu 2 148 0 8 679 302 67 22 0 chrX 12343129 12343174 -154307122 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 8 679 502 223 0 0 chrX 12343414 12343508 -154306788 + B1_Mur1 SINE Alu 49 142 -7 8 679 514 178 72 36 chrX 12343655 12343766 -154306530 + PB1D9 SINE Alu 1 115 -5 8 679 694 211 59 63 chrX 12344192 12344414 -154305882 - ID_B1 SINE B4 0 224 4 8 679 1993 118 116 0 chrX 12344862 12345208 -154305088 + ORR1B1 LTR MaLR 1 386 -8 8 679 274 164 146 0 chrX 12345255 12345310 -154304986 - PB1D7 SINE Alu -34 86 24 8 679 610 170 0 0 chrX 12345312 12345418 -154304878 + B1_Mus2 SINE Alu 42 147 0 8 679 186 43 0 0 chrX 12345420 12345443 -154304853 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 679 534 262 0 69 chrX 12345804 12345964 -154304332 + B3A SINE B2 1 149 -49 8 679 505 257 20 7 chrX 12346241 12346363 -154303933 - B1_Mur1 SINE Alu 0 127 2 8 679 25 24 0 23 chrX 12346600 12346619 -154303677 + AT_rich Low_complexity Low_complexity 1 19 0 8 679 1379 68 11 0 chrX 12346619 12346796 -154303500 + B2_Mm1t SINE B2 1 179 -14 8 679 25 24 0 23 chrX 12346796 12346819 -154303477 + AT_rich Low_complexity Low_complexity 1 23 0 8 679 560 284 158 0 chrX 12346946 12347136 -154303160 + ID_B1 SINE B4 5 224 0 8 679 489 197 130 30 chrX 12347160 12347291 -154303005 + B1_Mur1 SINE Alu 6 149 0 8 679 701 212 15 0 chrX 12347861 12347993 -154302303 + B1_Mur1 SINE Alu 1 134 -15 8 679 851 162 0 75 chrX 12348120 12348280 -154302016 + B1_Mur4 SINE Alu 1 148 -2 8 679 1113 56 7 7 chrX 12348429 12348573 -154301723 + B1_Mus1 SINE Alu 3 146 -2 8 679 504 245 96 6 chrX 12348994 12349150 -154301146 + LTR65 LTR ERV1 1 170 -499 8 679 702 232 47 6 chrX 12349182 12349351 -154300945 + B3A SINE B2 5 180 -18 8 679 311 325 103 0 chrX 12349386 12349589 -154300707 - LTR65 LTR ERV1 -118 551 328 8 679 368 297 46 23 chrX 12349761 12349892 -154300404 - B1F SINE Alu -9 140 7 8 679 1144 63 0 0 chrX 12349990 12350132 -154300164 - B1_Mm SINE Alu -5 142 1 8 679 501 284 30 0 chrX 12350682 12350816 -154299480 - ID_B1 SINE B4 -7 217 80 8 679 460 224 33 47 chrX 12351265 12351415 -154298881 - RLTR14 LTR ERV1 0 382 235 8 679 383 74 35 58 chrX 12351418 12351457 -154298839 + A-rich Low_complexity Low_complexity 2 38 0 8 679 563 111 12 0 chrX 12351457 12351538 -154298758 + ID4 SINE ID 2 83 0 8 679 383 74 35 58 chrX 12351538 12351584 -154298712 + A-rich Low_complexity Low_complexity 39 85 0 8 679 401 18 54 0 chrX 12352005 12352061 -154298235 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 8 679 746 58 0 0 chrX 12352061 12352164 -154298132 - B1_Mus2 SINE Alu -3 144 42 8 679 246 176 77 51 chrX 12352101 12352179 -154298117 - RLTR25B LTR ERVK -519 509 430 8 679 430 235 142 15 chrX 12352281 12352415 -154297881 - RSINE1 SINE B4 -11 154 4 8 679 1535 47 0 25 chrX 12352831 12353029 -154297267 - B2_Mm2 SINE B2 0 195 3 8 679 747 267 102 15 chrX 12353118 12353384 -154296912 + MTEa LTR MaLR 36 324 -55 8 679 28120 93 45 46 chrX 12353384 12354141 -154296155 - Lx4A LINE L1 -1038 6020 5260 8 679 1854 124 58 58 chrX 12354141 12354467 -154295829 - ORR1A3 LTR MaLR 0 326 1 8 679 28120 93 48 54 chrX 12354467 12355062 -154295234 - Lx4A LINE L1 -618 5259 4740 8 679 1224 48 0 7 chrX 12355062 12355210 -154295086 - B1_Mm SINE Alu 0 147 1 8 679 28120 93 48 54 chrX 12355210 12356224 -154294072 - Lx4A LINE L1 -1138 4739 3652 8 679 4396 162 34 5 chrX 12356224 12356994 -154293302 - Lx2B LINE L1 -1 6999 6208 8 679 28120 93 48 54 chrX 12356994 12357562 -154292734 - Lx4A LINE L1 -2226 3651 3056 8 679 1195 102 0 64 chrX 12357562 12357750 -154292546 - B2_Mm2 SINE B2 -18 177 2 8 679 28120 93 48 54 chrX 12357750 12358015 -154292281 - Lx4A LINE L1 -2822 3055 2791 8 679 291 28 0 0 chrX 12358015 12358051 -154292245 + (CTTG)n Simple_repeat Simple_repeat 2 37 0 8 679 28120 93 48 54 chrX 12358051 12358063 -154292233 - Lx4A LINE L1 -3087 2790 2787 8 679 1111 50 43 0 chrX 12358063 12358204 -154292092 - B1_Mm SINE Alu 0 147 1 9 679 28120 93 48 54 chrX 12358204 12358886 -154291410 - Lx4A LINE L1 -3091 2786 2101 8 679 2298 112 16 0 chrX 12358886 12359208 -154291088 + ORR1A2 LTR MaLR 1 327 0 9 679 28120 93 48 54 chrX 12359208 12359251 -154291045 - Lx4A LINE L1 -3777 2100 2059 8 679 243 103 0 0 chrX 12359251 12359290 -154291006 + (TG)n Simple_repeat Simple_repeat 1 39 0 9 679 28120 116 43 41 chrX 12359290 12361064 -154289232 - Lx4A LINE L1 -3819 2058 403 8 679 449 290 0 31 chrX 12361133 12361261 -154289035 - RSINE1 SINE B4 -40 125 2 9 679 230 300 64 40 chrX 12361392 12361517 -154288779 - B1_Mus2 SINE Alu -17 130 3 9 679 764 228 16 42 chrX 12361517 12361601 -154288695 - ID SINE ID -145 79 1 9 679 1510 6 0 0 chrX 12361664 12361836 -154288460 + L1Md_A LINE L1 6409 6580 -2 9 679 1684 21 0 15 chrX 12361836 12362031 -154288265 + B2_Mm1a SINE B2 2 193 0 9 679 281 303 82 106 chrX 12362222 12362429 -154287867 + LTR41 LTR ERVL 1 202 -566 9 679 13537 47 1 5 chrX 12362775 12365134 -154285162 - L1Md_F2 LINE L1 -12 6570 4223 9 679 4739 128 60 32 chrX 12365102 12366514 -154283782 - L1Md_F2 LINE L1 -4213 1670 214 9 679 424 333 51 6 chrX 12366660 12366838 -154283458 - B4 SINE B4 -105 187 2 9 679 296 184 59 43 chrX 12366838 12366940 -154283356 + LTR41B LTR ERVL 672 768 0 9 679 252 154 0 0 chrX 12367024 12367076 -154283220 + T-rich Low_complexity Low_complexity 1 52 0 9 679 216 0 0 0 chrX 12367241 12367265 -154283031 + (CA)n Simple_repeat Simple_repeat 2 25 0 9 679 1141 42 21 0 chrX 12367292 12367436 -154282860 - B1_Mm SINE Alu 0 147 1 9 679 683 246 22 17 chrX 12367459 12367637 -154282659 + B3A SINE B2 2 180 -18 9 679 901 176 63 11 chrX 12367637 12367827 -154282469 + RMER19B LTR ERVK 198 397 -505 9 679 690 109 0 0 chrX 12367836 12367946 -154282350 - RMER19B LTR ERVK -792 110 1 9 679 261 141 165 66 chrX 12367973 12367986 -154282310 + B2_Mm2 SINE B2 2 14 -181 9 679 852 105 161 56 chrX 12367986 12368147 -154282149 + B2_Mm1t SINE B2 3 180 -13 9 679 261 130 399 39 chrX 12368147 12368276 -154282020 + B2_Mm2 SINE B2 15 192 -3 9 679 942 100 69 0 chrX 12368439 12368569 -154281727 + B1_Mus2 SINE Alu 1 139 -8 9 679 22 0 0 0 chrX 12368738 12368760 -154281536 + AT_rich Low_complexity Low_complexity 1 22 0 9 679 842 299 114 39 chrX 12368923 12369354 -154280942 - LTR16B LTR ERVL 0 463 1 9 679 324 250 109 55 chrX 12369668 12369739 -154280557 + RSINE1 SINE B4 45 116 -49 9 679 1842 168 67 17 chrX 12369739 12370097 -154280199 - ORR1C1 LTR MaLR 0 378 3 9 679 324 250 109 55 chrX 12370097 12370135 -154280161 + RSINE1 SINE B4 117 160 -5 9 679 353 303 0 0 chrX 12370262 12370361 -154279935 + PB1D10 SINE Alu 13 111 -6 9 679 1067 224 100 26 chrX 12370534 12370805 -154279491 + B4 SINE B4 2 292 0 9 679 497 282 75 65 chrX 12370810 12370996 -154279300 + MLT1E2-int LTR MaLR 970 1157 -332 9 679 264 185 62 0 chrX 12371016 12371081 -154279215 - PB1D10 SINE Alu -13 104 36 9 679 358 203 0 0 chrX 12371079 12371143 -154279153 - B3 SINE B2 -43 173 110 9 679 1700 26 0 0 chrX 12371252 12371443 -154278853 + B2_Mm1a SINE B2 2 192 -1 9 679 490 97 0 0 chrX 12371796 12371868 -154278428 - B3 SINE B2 -105 111 40 9 679 302 274 55 36 chrX 12371913 12372023 -154278273 - B1F2 SINE Alu -31 118 7 9 679 496 282 143 5 chrX 12372087 12372276 -154278020 + MLT1E2 LTR MaLR 218 432 -195 9 679 482 277 103 0 chrX 12372415 12372570 -154277726 + MLT1E2 LTR MaLR 449 619 -8 9 679 235 193 0 66 chrX 12372588 12372649 -154277647 + MLT1C LTR MaLR 83 139 -328 9 679 419 0 20 0 chrX 12372685 12372736 -154277560 + (GA)n Simple_repeat Simple_repeat 1 52 0 9 679 699 217 0 48 chrX 12372746 12372891 -154277405 - RSINE1 SINE B4 -25 140 3 9 679 440 252 106 0 chrX 12373065 12373188 -154277108 + B1F1 SINE Alu 1 136 -13 9 679 2527 154 63 44 chrX 12373188 12373273 -154277023 - RLTR20C LTR ERVK -1 533 446 9 679 378 0 0 0 chrX 12373273 12373315 -154276981 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 679 2527 154 63 44 chrX 12373315 12373669 -154276627 - RLTR20C LTR ERVK -89 445 87 9 679 1270 34 0 0 chrX 12373669 12373815 -154276481 + B1_Mm SINE Alu 2 147 0 9 679 2527 154 63 44 chrX 12373815 12373897 -154276399 - RLTR20C LTR ERVK -448 86 4 9 679 414 256 123 8 chrX 12374164 12374286 -154276010 - RSINE1 SINE B4 -19 146 11 9 679 468 225 66 8 chrX 12374287 12374408 -154275888 - B4A SINE B4 -88 204 77 9 679 551 144 169 0 chrX 12374408 12374526 -154275770 - B1_Mur1 SINE Alu 0 149 12 9 679 418 279 135 72 chrX 12374410 12374603 -154275693 - B4 SINE B4 -69 223 19 9 679 316 224 114 73 chrX 12374613 12374734 -154275562 + B3 SINE B2 65 182 -16 9 679 788 204 14 0 chrX 12374734 12374881 -154275415 + ORR1D2 LTR MaLR 3 151 -219 9 679 509 137 63 0 chrX 12375029 12375124 -154275172 - B1_Mur2 SINE Alu 0 149 49 9 679 303 226 23 35 chrX 12375118 12375205 -154275091 - B3A SINE B2 -111 87 2 9 679 1810 133 183 0 chrX 12375212 12375535 -154274761 - ORR1C2 LTR MaLR -2 382 1 9 679 376 263 298 0 chrX 12375575 12375689 -154274607 - RSINE1 SINE B4 -15 150 3 9 679 210 105 0 0 chrX 12375693 12375731 -154274565 + (T)n Simple_repeat Simple_repeat 1 38 0 9 679 1259 40 0 0 chrX 12375731 12375879 -154274417 - B1_Mus1 SINE Alu 0 148 1 9 679 667 221 8 0 chrX 12375953 12376080 -154274216 - B1_Mur1 SINE Alu -5 144 17 9 679 867 163 13 20 chrX 12376125 12376275 -154274021 + B1_Mur3 SINE Alu 1 149 0 9 679 3629 50 4 7 chrX 12376484 12376943 -154273353 - L1_Mus3 LINE L1 0 6638 6181 9 679 756 353 77 16 chrX 12377429 12377795 -154272501 - LTR31 LTR ERV1 -9 610 223 9 679 372 300 87 29 chrX 12377968 12378174 -154272122 - MER67B LTR ERV1 -150 511 294 9 679 387 0 0 0 chrX 12378592 12378635 -154271661 + (TC)n Simple_repeat Simple_repeat 2 44 0 9 679 539 214 27 48 chrX 12378709 12378856 -154271440 - RSINE1 SINE B4 -10 155 12 9 679 456 35 0 0 chrX 12378873 12378931 -154271365 + (TG)n Simple_repeat Simple_repeat 2 59 0 9 679 554 105 13 0 chrX 12378990 12379066 -154271230 - LSU-rRNA_Hsa rRNA rRNA -3 5032 4956 9 679 515 229 73 8 chrX 12379132 12379255 -154271041 - B1_Mus1 SINE Alu -9 139 9 9 679 360 258 77 107 chrX 12379255 12379291 -154271005 - B4 SINE B4 -2 190 59 9 679 1225 61 0 0 chrX 12379341 12379488 -154270808 + B1_Mus1 SINE Alu 2 148 0 9 679 518 246 50 36 chrX 12379496 12379635 -154270661 + RSINE1 SINE B4 1 141 -24 9 679 1382 103 0 15 chrX 12380021 12380219 -154270077 - B2_Mm2 SINE B2 0 195 1 9 679 2830 55 0 6 chrX 12380503 12380847 -154269449 - ORR1A1 LTR MaLR 0 346 5 9 679 326 282 8 114 chrX 12380886 12381018 -154269278 + B4A SINE B4 2 119 -173 9 679 613 220 0 0 chrX 12381159 12381268 -154269028 + B3 SINE B2 1 109 -107 9 679 300 313 78 0 chrX 12381713 12381828 -154268468 - PB1 SINE Alu 0 127 4 9 679 469 232 32 84 chrX 12381866 12382021 -154268275 - B1_Mur3 SINE Alu 0 149 3 9 679 2740 54 14 3 chrX 12382090 12382442 -154267854 + L1Md_F3 LINE L1 6229 6584 0 9 679 480 122 229 18 chrX 12382473 12382582 -154267714 - B1F2 SINE Alu 0 149 18 9 679 565 292 104 49 chrX 12382654 12383183 -154267113 - L1M4 LINE L1 -1004 5142 4585 9 679 421 257 12 108 chrX 12383208 12383374 -154266922 + RSINE1 SINE B4 14 163 -2 9 679 423 0 0 0 chrX 12383385 12383432 -154266864 + (TC)n Simple_repeat Simple_repeat 1 47 0 9 679 342 0 0 0 chrX 12383432 12383469 -154266827 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 679 22 0 0 0 chrX 12383568 12383590 -154266706 + AT_rich Low_complexity Low_complexity 1 22 0 9 679 492 281 32 25 chrX 12383590 12383747 -154266549 + RSINE1 SINE B4 4 161 -4 9 679 1200 117 22 0 chrX 12383796 12383975 -154266321 - B2_Mm1t SINE B2 -9 184 2 9 679 266 143 0 0 chrX 12384010 12384052 -154266244 + B3 SINE B2 1 42 -174 9 679 511 259 149 31 chrX 12384080 12384335 -154265961 - L1MD LINE L1 -3363 2783 2499 9 679 224 329 12 35 chrX 12384356 12384441 -154265855 - ID_B1 SINE B4 -52 172 90 9 679 1224 54 0 0 chrX 12384568 12384715 -154265581 + B1_Mus1 SINE Alu 2 148 0 9 679 607 237 118 44 chrX 12384766 12384969 -154265327 - Lx8 LINE L1 -652 6821 6604 9 679 228 35 0 0 chrX 12385041 12385070 -154265226 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 9 679 1408 86 37 0 chrX 12385086 12385273 -154265023 + B2_Mm2 SINE B2 2 195 0 9 679 270 91 0 64 chrX 12385277 12385324 -154264972 - B1_Mur3 SINE Alu -13 136 93 9 679 945 260 182 25 chrX 12385320 12385766 -154264530 - Charlie12 DNA MER1_type -966 1907 1392 9 679 1063 71 35 0 chrX 12385768 12385909 -154264387 + B1_Mus1 SINE Alu 3 148 0 9 679 510 61 0 0 chrX 12385909 12385975 -154264321 + (GAA)n Simple_repeat Simple_repeat 2 67 0 9 679 1869 136 54 95 chrX 12385983 12386224 -154264072 - ORR1D1 LTR MaLR 0 374 143 9 679 683 180 275 23 chrX 12386224 12386395 -154263901 + B3 SINE B2 2 215 -1 9 679 1869 136 54 95 chrX 12386395 12386543 -154263753 - ORR1D1 LTR MaLR -232 142 1 9 679 843 181 7 13 chrX 12386652 12386803 -154263493 + B1_Mur4 SINE Alu 1 150 0 9 679 797 161 24 8 chrX 12386844 12387027 -154263269 - B3 SINE B2 -2 193 1 9 679 361 244 246 31 chrX 12387027 12387233 -154263063 - Charlie12 DNA MER1_type -1909 964 711 9 679 315 71 0 0 chrX 12387564 12387606 -154262690 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 679 692 277 19 0 chrX 12387946 12388105 -154262191 - RSINE1 SINE B4 -1 164 3 9 679 433 282 33 149 chrX 12388114 12388235 -154262061 - B1F1 SINE Alu -38 111 2 9 679 327 212 15 0 chrX 12388485 12388551 -154261745 + ID4_ SINE ID 1 67 -16 9 679 198 103 0 0 chrX 12388938 12388967 -154261329 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 9 679 728 206 69 49 chrX 12388987 12389191 -154261105 - B3 SINE B2 0 216 9 1 679 234 281 41 44 chrX 12389205 12389443 -154260853 - L1_Rod LINE L1 -470 5410 5144 1 679 504 229 235 0 chrX 12389465 12389631 -154260665 - B3 SINE B2 -10 206 2 1 679 483 308 39 0 chrX 12389689 12389845 -154260451 - RSINE1 SINE B4 -2 163 2 1 679 405 39 0 0 chrX 12389865 12389916 -154260380 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1 679 1181 69 0 0 chrX 12389916 12390061 -154260235 - B1_Mus2 SINE Alu -2 145 1 1 679 477 232 98 72 chrX 12390488 12390672 -154259624 - MTE2b LTR MaLR -23 336 167 1 679 1024 102 0 26 chrX 12390689 12390840 -154259456 - B1_Mus1 SINE Alu -1 147 1 1 679 673 247 32 60 chrX 12390841 12391026 -154259270 - MTE2b LTR MaLR -199 180 1 1 679 1497 63 5 0 chrX 12391538 12391728 -154258568 - B2_Mm1t SINE B2 0 193 3 1 679 308 121 182 0 chrX 12391771 12391837 -154258459 - PB1D9 SINE Alu -1 119 42 1 679 294 192 55 0 chrX 12391837 12391910 -154258386 + (CCTG)n Simple_repeat Simple_repeat 2 78 0 1 679 928 284 0 0 chrX 12392014 12392215 -154258081 - B4A SINE B4 -4 288 88 1 679 628 284 0 0 chrX 12392448 12392575 -154257721 - RSINE1 SINE B4 -36 129 3 1 679 719 174 221 9 chrX 12393196 12393422 -154256874 - Lx9 LINE L1 -9 7635 7362 1 679 943 247 198 21 chrX 12393456 12393888 -154256408 - RMER4B LTR ERVK -7 604 26 1 679 359 290 9 0 chrX 12393911 12394018 -154256278 - Lx9 LINE L1 -290 7354 7247 1 679 1110 43 0 0 chrX 12394033 12394171 -154256125 - B1_Mus2 SINE Alu 0 147 10 1 679 1106 232 53 19 chrX 12394171 12394434 -154255862 - Lx9 LINE L1 -390 7254 6983 1 679 230 320 0 0 chrX 12394487 12394537 -154255759 - tRNA-Ala-GCY_ tRNA tRNA -24 51 2 1 679 284 278 28 0 chrX 12394560 12394623 -154255673 - ID_B1 SINE B4 0 224 160 1 679 1533 198 189 78 chrX 12394623 12395099 -154255197 + MT2A LTR ERVL 4 532 -1 1 679 391 212 12 12 chrX 12395099 12395165 -154255131 - ID_B1 SINE B4 -60 164 99 1 679 862 206 186 5 chrX 12395183 12395398 -154254898 + MTD LTR MaLR 166 419 0 1 679 965 244 44 100 chrX 12395398 12395586 -154254710 + MTD-int LTR MaLR 1 165 -1093 1 679 1421 71 11 16 chrX 12395586 12395773 -154254523 + B2_Mm2 SINE B2 1 186 -9 1 679 965 244 44 100 chrX 12395773 12395925 -154254371 + MTD-int LTR MaLR 166 322 -936 1 679 597 152 0 0 chrX 12395925 12396030 -154254266 + CT-rich Low_complexity Low_complexity 3 107 0 1 679 340 174 52 58 chrX 12396252 12396348 -154253948 + B1_Mus2 SINE Alu 31 146 -1 1 679 434 260 10 0 chrX 12396363 12396463 -154253833 + B4 SINE B4 2 102 -190 1 679 532 285 48 7 chrX 12396492 12396637 -154253659 + RSINE1 SINE B4 2 152 -13 1 679 814 169 81 43 chrX 12397483 12397668 -154252628 + B3A SINE B2 1 192 -6 1 679 324 216 65 43 chrX 12397738 12397830 -154252466 - LTR40b LTR ERVL -5 457 364 1 679 270 273 213 73 chrX 12397985 12398023 -154252273 + B4 SINE B4 60 200 -92 1 679 590 127 94 38 chrX 12398023 12398129 -154252167 + PB1D9 SINE Alu 9 120 0 1 679 305 176 0 19 chrX 12398250 12398302 -154251994 + MTD LTR MaLR 3 53 -368 1 679 1941 163 79 11 chrX 12398309 12398662 -154251634 + RLTR14 LTR ERV1 6 382 0 1 679 1814 231 11 8 chrX 12398662 12399016 -154251280 + MTD LTR MaLR 54 408 -11 1 679 203 186 0 23 chrX 12399335 12399379 -154250917 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 679 876 253 30 79 chrX 12399379 12399684 -154250612 - B4A SINE B4 0 292 3 1 679 736 176 273 0 chrX 12399684 12399849 -154250447 - URR1A DNA MER1_type -15 211 2 1 679 291 28 0 0 chrX 12400236 12400272 -154250024 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 679 634 268 56 67 chrX 12400440 12400708 -154249588 - B4 SINE B4 -24 268 4 1 679 595 189 0 67 chrX 12400859 12400978 -154249318 - PB1D9 SINE Alu -8 112 2 1 679 180 0 0 0 chrX 12401026 12401046 -154249250 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 679 1123 95 0 0 chrX 12401066 12401213 -154249083 - B1_Mus1 SINE Alu 0 148 2 1 679 350 326 58 7 chrX 12401480 12401548 -154248748 + ID SINE ID 6 80 -144 1 679 228 310 89 10 chrX 12401548 12401649 -154248647 + PB1D10 SINE Alu 1 109 -8 1 679 392 238 26 106 chrX 12402241 12402354 -154247942 + ID_B1 SINE B4 112 215 -9 1 679 1024 228 24 189 chrX 12402694 12403148 -154247148 - MTE2a LTR MaLR 0 379 1 1 679 556 299 46 29 chrX 12403266 12403469 -154246827 + ID_B1 SINE B4 67 276 -16 1 679 293 226 308 0 chrX 12403686 12403819 -154246477 + Charlie2b DNA MER1_type 1952 2125 -657 1 679 3074 146 200 7 chrX 12403826 12404406 -154245890 + RLTR17 LTR ERVK 1 692 0 1 679 314 80 36 91 chrX 12404429 12404484 -154245812 - ORR1C1 LTR MaLR 0 378 327 1 679 192 40 0 0 chrX 12404484 12404509 -154245787 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 679 825 148 16 0 chrX 12404531 12404659 -154245637 - B1_Mur4 SINE Alu -20 130 1 1 679 1601 149 92 20 chrX 12404660 12404955 -154245341 - ORR1C1 LTR MaLR -62 316 1 1 679 398 106 0 5 chrX 12405252 12405317 -154244979 - B2_Mm2 SINE B2 -107 109 47 1 679 1115 81 118 0 chrX 12405364 12405525 -154244771 - B2_Mm2 SINE B2 -14 181 2 1 679 730 182 98 0 chrX 12405860 12405992 -154244304 - B1_Mus2 SINE Alu 0 147 3 1 679 866 38 0 0 chrX 12405992 12406095 -154244201 + B1_Mus2 SINE Alu 45 147 0 1 679 726 155 30 6 chrX 12406095 12406264 -154244032 + GA-rich Low_complexity Low_complexity 2 174 0 1 679 333 0 0 0 chrX 12406266 12406303 -154243993 + (GAAAA)n Simple_repeat Simple_repeat 1 37 0 1 679 679 235 25 0 chrX 12407008 12407170 -154243126 - HERVL40-int LTR ERVL -1595 3935 3770 1 679 1777 200 68 26 chrX 12407348 12407733 -154242563 + MTD LTR MaLR 5 405 -14 1 679 536 167 15 111 chrX 12407733 12407799 -154242497 + ORR1C2 LTR MaLR 263 325 -59 1 679 1672 31 0 5 chrX 12407799 12407992 -154242304 - B2_Mm1a SINE B2 0 193 2 1 679 536 167 15 111 chrX 12407992 12408060 -154242236 + ORR1C2 LTR MaLR 326 384 0 1 679 1636 194 13 98 chrX 12408060 12408431 -154241865 - ORR1D1 LTR MaLR -35 339 1 1 679 345 301 27 20 chrX 12408515 12408661 -154241635 - HERVL40-int LTR ERVL -2783 2747 2601 1 679 265 236 18 0 chrX 12408673 12408728 -154241568 - ID4_ SINE ID -26 57 2 1 679 484 312 7 7 chrX 12408803 12408948 -154241348 - HERVL40-int LTR ERVL -3019 2511 2367 1 679 2097 120 16 3 chrX 12409162 12409516 -154240780 + ORR1A3 LTR MaLR 23 394 0 1 679 1031 257 87 54 chrX 12409833 12410193 -154240103 + MTD LTR MaLR 9 419 0 1 679 210 37 0 0 chrX 12410462 12410489 -154239807 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 1 679 757 169 96 34 chrX 12410675 12410852 -154239444 + B2_Mm2 SINE B2 1 188 -7 1 679 615 0 13 0 chrX 12410856 12410931 -154239365 + B1_Mm SINE Alu 72 147 0 1 679 210 86 0 0 chrX 12410998 12411013 -154239283 + (T)n Simple_repeat Simple_repeat 1 15 0 1 679 1161 81 0 0 chrX 12411013 12411161 -154239135 - B1_Mus1 SINE Alu 0 148 1 1 679 210 86 0 0 chrX 12411161 12411180 -154239116 + (T)n Simple_repeat Simple_repeat 1 19 0 1 679 1202 43 0 0 chrX 12411215 12411354 -154238942 - B1_Mus1 SINE Alu -9 139 1 1 679 1842 138 73 29 chrX 12411377 12411690 -154238606 - ORR1A2 LTR MaLR 0 327 1 1 679 23 0 0 0 chrX 12411702 12411725 -154238571 + AT_rich Low_complexity Low_complexity 1 23 0 1 679 189 0 0 0 chrX 12411781 12411802 -154238494 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 679 189 0 0 0 chrX 12411803 12411824 -154238472 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 679 269 377 25 58 chrX 12412585 12412706 -154237590 - B1F2 SINE Alu -32 117 1 1 679 652 245 82 47 chrX 12412706 12412772 -154237524 - ID SINE ID -150 74 3 1 679 1790 144 100 12 chrX 12413018 12413348 -154236948 - ORR1B2 LTR MaLR -8 359 1 1 679 700 169 75 43 chrX 12413860 12413936 -154236360 - RLTR24 LTR ERV1 0 529 443 1 679 252 0 0 0 chrX 12413936 12413964 -154236332 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 1 679 830 57 151 16 chrX 12413964 12414085 -154236211 - B1_Mm SINE Alu -4 143 6 1 679 700 169 75 43 chrX 12414085 12414173 -154236123 - RLTR24 LTR ERV1 -87 442 365 1 679 990 97 7 14 chrX 12414184 12414330 -154235966 - B1_Mus1 SINE Alu -1 147 3 1 679 603 193 42 0 chrX 12415400 12415519 -154234777 - B1_Mur1 SINE Alu -1 148 25 1 679 1183 41 7 27 chrX 12415792 12415942 -154234354 + B1_Mus1 SINE Alu 1 147 -1 1 679 513 0 0 0 chrX 12416095 12416152 -154234144 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 1 679 369 0 0 0 chrX 12416664 12416705 -154233591 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 679 678 225 77 17 chrX 12416823 12417004 -154233292 + B2_Mm2 SINE B2 2 193 -2 1 679 205 50 23 91 chrX 12418022 12418066 -154232230 + (CCA)n Simple_repeat Simple_repeat 2 42 0 1 679 335 156 62 0 chrX 12418373 12418448 -154231848 - B1_Mur2 SINE Alu -9 140 62 1 679 228 329 41 0 chrX 12418766 12418839 -154231457 + RSINE1 SINE B4 87 162 -3 1 679 243 0 0 0 chrX 12418857 12418884 -154231412 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1 679 1194 63 0 0 chrX 12418885 12419028 -154231268 - B1_Mus2 SINE Alu -4 143 1 1 679 486 309 81 46 chrX 12419044 12419241 -154231055 + B4A SINE B4 85 288 -4 1 679 288 0 0 0 chrX 12419296 12419328 -154230968 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1 679 1168 82 0 6 chrX 12419329 12419488 -154230808 - B2_Mm2 SINE B2 -37 158 1 1 679 35 24 0 0 chrX 12419639 12419681 -154230615 + AT_rich Low_complexity Low_complexity 1 42 0 1 679 246 282 202 0 chrX 12419772 12419896 -154230400 + B1_Mur2 SINE Alu 1 149 0 1 679 393 339 27 5 chrX 12419928 12420127 -154230169 - L1MD LINE L1 -563 5796 5593 1 679 225 286 50 38 chrX 12420138 12420218 -154230078 - ID4_ SINE ID -1 82 2 1 679 1183 68 0 0 chrX 12420261 12420407 -154229889 - B1_Mus1 SINE Alu 0 148 3 1 679 929 236 35 0 chrX 12420594 12420797 -154229499 + B3 SINE B2 2 211 -5 1 679 1192 55 0 7 chrX 12420908 12421055 -154229241 - B1_Mus1 SINE Alu -1 147 2 1 679 940 297 85 75 chrX 12421056 12421551 -154228745 - Lx8 LINE L1 -13 7460 6961 1 679 353 200 0 0 chrX 12421563 12421623 -154228673 + RMER15 LTR ERVL 1 60 -515 1 679 1916 207 88 117 chrX 12421718 12422276 -154228020 + RMER15 LTR ERVL 31 572 -3 1 679 279 79 0 0 chrX 12422276 12422314 -154227982 + (CATA)n Simple_repeat Simple_repeat 4 41 0 1 679 236 238 294 10 chrX 12422322 12422424 -154227872 - Lx8 LINE L1 -530 6943 6813 1 679 381 142 54 30 chrX 12422664 12422831 -154227465 + (TG)n Simple_repeat Simple_repeat 1 171 0 1 679 316 306 35 0 chrX 12423000 12423085 -154227211 + ID_B1 SINE B4 82 169 -55 1 679 441 156 122 20 chrX 12423085 12423183 -154227113 + PB1D9 SINE Alu 12 119 -1 1 679 479 182 0 0 chrX 12423193 12423270 -154227026 + B3A SINE B2 1 77 -121 1 679 1075 145 22 11 chrX 12423886 12424067 -154226229 - B2_Mm2 SINE B2 -11 184 2 1 679 831 282 94 0 chrX 12424128 12424394 -154225902 - B4A SINE B4 -1 291 1 1 679 185 275 0 0 chrX 12424425 12424465 -154225831 + MIRm SINE MIR 210 249 -27 1 679 602 204 35 12 chrX 12424664 12424783 -154225513 + RSINE1 SINE B4 1 120 -45 1 679 283 293 22 89 chrX 12424783 12424799 -154225497 + B2_Mm2 SINE B2 1 126 -69 1 679 618 268 0 0 chrX 12424824 12424951 -154225345 + B3A SINE B2 1 127 -71 1 679 1240 54 0 0 chrX 12425037 12425184 -154225112 + B1_Mus1 SINE Alu 2 148 0 1 679 270 0 0 0 chrX 12425196 12425226 -154225070 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 1 679 720 154 69 8 chrX 12425226 12425357 -154224939 + B1F2 SINE Alu 3 141 -8 1 679 1198 70 6 0 chrX 12425935 12426092 -154224204 + B2_Mm1a SINE B2 1 158 -35 1 679 549 44 0 0 chrX 12426092 12426160 -154224136 + (GAAA)n Simple_repeat Simple_repeat 1 68 0 1 679 246 121 371 25 chrX 12426375 12426468 -154223828 + MTE2b LTR MaLR 258 367 -12 1 679 369 323 50 30 chrX 12426466 12426664 -154223632 + MLT1K LTR MaLR 366 567 -28 1 679 1039 168 15 20 chrX 12426678 12426873 -154223423 + B2_Mm2 SINE B2 1 194 -1 1 679 1049 231 51 5 chrX 12426875 12427092 -154223204 + B4A SINE B4 6 232 -60 1 679 289 232 0 0 chrX 12427111 12427167 -154223129 - B1_Mus2 SINE Alu -91 56 1 1 679 26 50 0 0 chrX 12427168 12427208 -154223088 + AT_rich Low_complexity Low_complexity 1 40 0 1 679 419 245 19 48 chrX 12427218 12427321 -154222975 - RSINE1 SINE B4 -64 101 2 1 679 229 26 53 0 chrX 12427334 12427372 -154222924 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 1 679 1104 75 0 0 chrX 12427372 12427506 -154222790 - B1_Mus1 SINE Alu -13 135 2 1 679 1475 88 0 15 chrX 12427533 12427730 -154222566 - B2_Mm2 SINE B2 0 195 2 1 679 359 254 12 123 chrX 12427737 12427899 -154222397 + MER5B DNA MER1_type 3 146 -32 1 679 185 244 0 0 chrX 12427964 12428005 -154222291 - MER5B DNA MER1_type -80 98 58 1 679 308 301 43 0 chrX 12428133 12428226 -154222070 - MER81 DNA AcHobo 0 114 18 1 679 234 0 0 0 chrX 12428450 12428476 -154221820 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1 679 293 295 72 21 chrX 12428476 12428573 -154221723 - PB1D10 SINE Alu -13 104 3 1 679 1161 75 0 0 chrX 12428605 12428752 -154221544 + B1_Mus1 SINE Alu 2 148 0 1 679 400 151 0 36 chrX 12428753 12428863 -154221433 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 1 679 853 228 48 68 chrX 12428871 12429078 -154221218 + B3 SINE B2 1 203 -13 1 679 1213 62 0 0 chrX 12429116 12429261 -154221035 - B1_Mus1 SINE Alu -2 146 2 1 679 385 236 45 36 chrX 12429485 12429595 -154220701 + PB1D7 SINE Alu 1 111 -9 1 679 250 329 0 48 chrX 12429610 12429693 -154220603 + ID4_ SINE ID 3 81 -2 1 679 185 132 26 0 chrX 12429775 12429813 -154220483 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 1 679 604 175 0 0 chrX 12429821 12429924 -154220372 - B1_Mur1 SINE Alu -6 143 41 1 679 435 258 46 127 chrX 12430198 12430371 -154219925 + MLT1A LTR MaLR 1 159 -215 1 679 809 247 34 0 chrX 12430379 12430453 -154219843 + ID SINE ID 3 82 -142 1 679 413 267 8 72 chrX 12430453 12430578 -154219718 + PB1D10 SINE Alu 1 117 0 1 679 367 257 103 20 chrX 12430634 12430815 -154219481 + MLT1A LTR MaLR 143 390 0 1 679 659 240 14 0 chrX 12431070 12431216 -154219080 - B1F2 SINE Alu -1 148 1 1 679 199 322 141 22 chrX 12431283 12431375 -154218921 + L2 LINE L2 2669 2771 -648 1 679 2627 109 26 3 chrX 12431510 12431887 -154218409 - ORR1B1 LTR MaLR -8 386 1 1 679 625 162 0 9 chrX 12431892 12431998 -154218298 + ORR1D1 LTR MaLR 1 105 -269 1 679 746 258 12 13 chrX 12432091 12432306 -154217990 - B3A SINE B2 -6 210 2 1 679 227 244 31 146 chrX 12433696 12433792 -154216504 + MLT1A1 LTR MaLR 6 90 -318 1 679 303 280 72 57 chrX 12433969 12434131 -154216165 + ORR1D1 LTR MaLR 209 408 0 1 679 204 271 0 17 chrX 12434287 12434347 -154215949 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 679 412 310 130 65 chrX 12434366 12434597 -154215699 - B4 SINE B4 -12 280 35 1 679 282 206 274 32 chrX 12434634 12434729 -154215567 - PB1D9 SINE Alu -1 119 2 1 679 191 32 65 0 chrX 12434803 12434834 -154215462 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 1 679 267 31 0 0 chrX 12434858 12434890 -154215406 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 679 504 0 0 0 chrX 12434905 12434961 -154215335 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 679 799 149 107 13 chrX 12436215 12436365 -154213931 - B3 SINE B2 -1 215 52 1 679 1571 149 68 37 chrX 12436368 12436497 -154213799 - RMER17C LTR ERVK 0 410 285 1 679 198 71 0 0 chrX 12436497 12436525 -154213771 + (AATAG)n Simple_repeat Simple_repeat 5 32 0 1 679 1571 149 68 37 chrX 12436525 12436778 -154213518 - RMER17C LTR ERVK -126 284 18 1 679 662 253 91 6 chrX 12436963 12437138 -154213158 + B3A SINE B2 2 191 -7 1 679 531 144 270 0 chrX 12437166 12437277 -154213019 + B1_Mus1 SINE Alu 1 141 -7 1 679 915 267 29 7 chrX 12438140 12438412 -154211884 + B4A SINE B4 1 278 -14 1 679 220 328 0 0 chrX 12438462 12438523 -154211773 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 679 738 147 80 7 chrX 12438544 12438681 -154211615 + B1_Mur4 SINE Alu 2 148 -2 1 679 186 43 0 0 chrX 12438683 12438706 -154211590 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 679 1340 88 33 0 chrX 12438717 12438899 -154211397 + B2_Mm2 SINE B2 3 190 -5 1 679 774 154 82 30 chrX 12439033 12439167 -154211129 - B1_Mus2 SINE Alu 0 147 7 1 679 348 193 165 57 chrX 12439425 12439601 -154210695 + B2_Mm2 SINE B2 1 195 0 1 679 2236 154 48 32 chrX 12439657 12440092 -154210204 - RMER10A LTR ERVL 0 442 1 1 679 841 209 0 0 chrX 12440253 12440406 -154209890 + B3 SINE B2 2 154 -62 1 679 1400 207 39 80 chrX 12440453 12440581 -154209715 - RMER1B Other Other -17 1049 933 1 679 1691 36 0 0 chrX 12440581 12440774 -154209522 + B2_Mm1a SINE B2 1 193 0 1 679 1400 207 39 80 chrX 12440774 12441007 -154209289 - RMER1B Other Other -134 932 703 1 679 264 204 20 0 chrX 12441032 12441081 -154209215 - ID4_ SINE ID -30 53 4 1 679 1335 116 11 0 chrX 12441503 12441692 -154208604 + B2_Mm1t SINE B2 1 191 -2 1 679 324 123 70 0 chrX 12441869 12441926 -154208370 + B3 SINE B2 2 62 -154 1 679 510 17 0 0 chrX 12441956 12442015 -154208281 + (TC)n Simple_repeat Simple_repeat 1 59 0 1 679 778 142 16 8 chrX 12442016 12442144 -154208152 - B1_Mur4 SINE Alu -21 129 1 1 679 245 347 53 0 chrX 12442944 12443019 -154207277 + RSINE1 SINE B4 6 84 -81 1 679 771 202 201 6 chrX 12442954 12443123 -154207173 + B3 SINE B2 15 216 0 1 679 892 147 14 22 chrX 12443140 12443279 -154207017 + B1_Mur2 SINE Alu 2 139 -10 1 679 241 231 0 0 chrX 12443329 12443381 -154206915 - B2_Mm2 SINE B2 -143 52 1 1 679 848 191 80 8 chrX 12443729 12443915 -154206381 + B3 SINE B2 15 195 0 1 679 412 149 102 164 chrX 12445297 12445336 -154204960 - Tigger7 DNA MER2_type -239 2252 2234 1 679 743 277 69 5 chrX 12445336 12445539 -154204757 - ID_B1 SINE B4 -8 216 1 1 679 412 149 102 164 chrX 12445539 12445627 -154204669 - Tigger7 DNA MER2_type -258 2233 2133 1 679 742 296 118 45 chrX 12445628 12445786 -154204510 - Tigger7 DNA MER2_type -2183 308 151 1 679 568 216 64 50 chrX 12445786 12445927 -154204369 - B1_Mur1 SINE Alu -5 144 2 1 679 742 296 118 45 chrX 12445927 12446055 -154204241 - Tigger7 DNA MER2_type -2341 150 1 1 679 341 209 0 75 chrX 12446230 12446323 -154203973 - PB1D9 SINE Alu 0 120 35 1 679 291 310 105 52 chrX 12446424 12446602 -154203694 - L1MA4 LINE L1 -1374 6086 5897 1 679 273 75 0 0 chrX 12446602 12446642 -154203654 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 679 468 0 0 0 chrX 12446642 12446693 -154203603 + (GA)n Simple_repeat Simple_repeat 2 53 0 1 679 723 252 56 1 chrX 12446693 12446894 -154203402 - L1MA4 LINE L1 -371 5929 5687 1 679 234 0 0 0 chrX 12447392 12447418 -154202878 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 679 498 61 0 0 chrX 12447418 12447484 -154202812 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 679 453 274 61 9 chrX 12447484 12447598 -154202698 - RSINE1 SINE B4 -42 123 4 1 679 815 292 53 30 chrX 12448171 12448436 -154201860 + B4A SINE B4 2 272 -20 1 679 563 228 37 0 chrX 12448529 12448664 -154201632 + B1F2 SINE Alu 1 145 -4 1 679 362 289 84 78 chrX 12448739 12449021 -154201275 + B4A SINE B4 1 292 0 1 679 774 199 7 0 chrX 12449240 12449386 -154200910 - B1_Mur2 SINE Alu -1 148 2 1 679 434 257 26 0 chrX 12449440 12449553 -154200743 - PB1D10 SINE Alu -1 116 1 1 679 1407 50 78 0 chrX 12449576 12449594 -154200702 - B2_Mm1t SINE B2 0 193 176 1 679 275 0 0 28 chrX 12449594 12449630 -154200666 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 1 679 1407 50 78 0 chrX 12449630 12449790 -154200506 - B2_Mm1t SINE B2 -18 175 2 1 679 453 261 27 47 chrX 12449943 12450092 -154200204 - B1_Mur1 SINE Alu 0 149 4 1 679 319 252 58 73 chrX 12450137 12450274 -154200022 + HAL1 LINE L1 47 181 -2326 1 679 460 247 53 84 chrX 12450537 12450727 -154199569 - LTR50 LTR ERVL -52 743 560 1 679 383 295 104 16 chrX 12450936 12451129 -154199167 - LTR50 LTR ERVL -583 212 3 1 679 321 68 0 0 chrX 12451208 12451252 -154199044 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 679 21 0 0 0 chrX 12451252 12451273 -154199023 + GC_rich Low_complexity Low_complexity 1 21 0 1 84 1143 81 0 0 chrX 12451739 12451887 -154198409 + B1_Mus1 SINE Alu 1 148 0 1 680 624 91 0 0 chrX 12451944 12452032 -154198264 + (GAAAA)n Simple_repeat Simple_repeat 1 88 0 1 680 448 255 38 0 chrX 12452110 12452216 -154198080 + PB1D9 SINE Alu 3 112 -8 1 680 180 0 0 0 chrX 12452221 12452241 -154198055 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 1 680 250 271 97 29 chrX 12452425 12452600 -154197696 + HAL1 LINE L1 1531 1717 -790 1 680 232 291 25 12 chrX 12452749 12452829 -154197467 + ID4_ SINE ID 2 82 -1 1 680 1271 85 79 0 chrX 12453230 12453376 -154196920 + B2_Mm2 SINE B2 3 148 -47 1 680 432 0 0 0 chrX 12453376 12453424 -154196872 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 680 1271 85 79 0 chrX 12453424 12453454 -154196842 + B2_Mm2 SINE B2 149 191 -4 1 680 275 183 146 0 chrX 12453456 12453538 -154196758 + HAL1 LINE L1 2039 2132 -375 1 680 303 311 195 40 chrX 12453547 12453922 -154196374 + LTR33 LTR ERVL 59 491 -24 1 680 290 113 0 0 chrX 12453998 12454051 -154196245 + B1_Mur4 SINE Alu 41 93 -57 1 680 616 247 121 63 chrX 12454113 12454320 -154195976 - ID_B1 SINE B4 -1 223 5 1 680 262 80 40 0 chrX 12454408 12454458 -154195838 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 680 336 139 25 12 chrX 12454470 12454550 -154195746 + GA-rich Low_complexity Low_complexity 1 81 0 1 680 197 139 23 0 chrX 12454560 12454603 -154195693 + (GGGTG)n Simple_repeat Simple_repeat 3 46 0 1 680 1365 154 23 0 chrX 12455802 12456022 -154194274 + URR1B DNA MER1_type 1 225 0 1 680 309 249 80 66 chrX 12456221 12456574 -154193722 - RMER17C LTR ERVK -106 304 3 1 680 213 65 0 0 chrX 12456612 12456643 -154193653 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 680 265 254 0 78 chrX 12456679 12456756 -154193540 + B4A SINE B4 214 284 -8 1 680 453 19 0 0 chrX 12456906 12456960 -154193336 + (CAAAA)n Simple_repeat Simple_repeat 3 56 0 1 680 1025 77 0 0 chrX 12456969 12457099 -154193197 + B1_Mus2 SINE Alu 2 131 -16 1 680 681 217 0 0 chrX 12457640 12457769 -154192527 + L1MA9 LINE L1 6178 6306 -6 1 680 501 58 0 0 chrX 12457872 12457941 -154192355 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 680 1011 56 0 40 chrX 12458041 12458189 -154192107 - B1_Mus1 SINE Alu -1 147 6 1 680 302 268 0 0 chrX 12458235 12458306 -154191990 + ID_B1 SINE B4 99 169 -55 1 680 299 278 60 30 chrX 12458306 12458335 -154191961 + PB1D7 SINE Alu 18 120 0 1 680 500 299 44 118 chrX 12458418 12458560 -154191736 + B4A SINE B4 82 221 -71 1 680 1480 63 21 0 chrX 12458560 12458750 -154191546 + B2_Mm2 SINE B2 1 194 -1 1 680 500 299 44 118 chrX 12458750 12458835 -154191461 + B4A SINE B4 222 292 0 1 680 712 224 102 22 chrX 12458974 12459323 -154190973 - RMER10A LTR ERVL 0 442 43 1 680 3029 39 3 0 chrX 12459325 12459712 -154190584 - MTA_Mm LTR MaLR -8 388 1 1 680 241 240 0 0 chrX 12459712 12459761 -154190535 - RMER10A LTR ERVL -393 49 1 1 680 3508 159 88 84 chrX 12459905 12460364 -154189932 - RMER19B LTR ERVK -12 890 395 1 680 1459 78 0 10 chrX 12460364 12460558 -154189738 - B2_Mm1a SINE B2 -1 192 1 1 680 3508 159 89 68 chrX 12460558 12461032 -154189264 - RMER19B LTR ERVK -508 394 1 1 680 1574 211 55 77 chrX 12461103 12461526 -154188770 + MYSERV-int LTR ERVK 5538 5801 -749 1 680 1224 130 32 11 chrX 12461526 12461713 -154188583 + B2_Mm2 SINE B2 2 192 -3 1 680 1574 234 70 113 chrX 12461713 12462185 -154188111 + MYSERV-int LTR ERVK 5802 6264 -286 1 680 198 0 0 0 chrX 12462337 12462359 -154187937 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 680 336 77 0 0 chrX 12462359 12462411 -154187885 + (CAGAGA)n Simple_repeat Simple_repeat 6 57 0 1 680 1148 74 28 22 chrX 12462519 12462698 -154187598 - B2_Mm2 SINE B2 -9 186 7 1 680 358 176 11 45 chrX 12462699 12462788 -154187508 - RMER17C-int LTR ERVK -10 3228 3143 1 680 1361 76 27 11 chrX 12463074 12463260 -154187036 + B2_Mm2 SINE B2 1 189 -6 1 680 479 310 61 39 chrX 12463553 12463823 -154186473 - ORR1E LTR MaLR -101 269 1 1 680 264 237 156 13 chrX 12464495 12464572 -154185724 + ID_B1 SINE B4 121 208 -16 1 680 868 111 0 62 chrX 12465775 12465949 -154184347 + GA-rich Low_complexity Low_complexity 1 162 0 1 680 222 37 0 0 chrX 12465949 12465976 -154184320 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 680 868 111 0 62 chrX 12465976 12465993 -154184303 + polypurine Low_complexity Low_complexity 163 179 0 1 680 342 115 0 0 chrX 12465995 12466047 -154184249 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 680 1458 181 86 50 chrX 12466366 12466584 -154183712 - RMER17C LTR ERVK 0 410 198 1 680 348 24 0 0 chrX 12466584 12466625 -154183671 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 680 1458 181 86 50 chrX 12466625 12466802 -154183494 - RMER17C LTR ERVK -213 197 2 1 680 1239 219 39 18 chrX 12466837 12467120 -154183176 - B4 SINE B4 0 292 4 1 680 790 281 71 13 chrX 12467166 12467476 -154182820 - MTE-int LTR MaLR -1252 328 1 1 680 619 264 14 0 chrX 12467702 12467842 -154182454 + ID_B1 SINE B4 82 223 -1 1 680 207 245 0 0 chrX 12467843 12467892 -154182404 + GA-rich Low_complexity Low_complexity 1 49 0 1 680 2034 127 21 3 chrX 12468090 12468415 -154181881 - ORR1B1 LTR MaLR -63 331 1 1 680 39 22 0 0 chrX 12468980 12469026 -154181270 + AT_rich Low_complexity Low_complexity 1 46 0 1 680 1738 21 0 0 chrX 12469356 12469549 -154180747 - B2_Mm1a SINE B2 0 193 1 1 680 809 234 16 16 chrX 12469573 12469764 -154180532 - B3A SINE B2 -7 191 1 1 680 249 154 0 0 chrX 12469786 12469825 -154180471 - ID_B1 SINE B4 -12 212 174 1 680 764 170 228 3 chrX 12469946 12470255 -154180041 - MTD LTR MaLR -8 411 33 1 680 772 103 92 46 chrX 12470255 12470408 -154179888 - URR1A DNA MER1_type 0 226 67 1 680 776 341 75 27 chrX 12470477 12470890 -154179406 - LTR16B2 LTR ERVL -14 448 16 1 680 245 222 42 0 chrX 12470890 12470962 -154179334 + GA-rich Low_complexity Low_complexity 2 76 0 1 680 1223 95 16 11 chrX 12470972 12471163 -154179133 - B2_Mm2 SINE B2 -3 192 1 1 680 623 164 35 0 chrX 12471196 12471312 -154178984 - B1F SINE Alu -1 148 29 1 680 216 246 96 82 chrX 12471200 12471346 -154178950 - B4A SINE B4 -70 222 75 1 680 735 33 0 0 chrX 12471957 12472047 -154178249 + (TTTC)n Simple_repeat Simple_repeat 3 92 0 1 680 1245 35 0 0 chrX 12472048 12472192 -154178104 - B1_Mus2 SINE Alu -2 145 2 1 680 238 333 0 82 chrX 12472409 12472428 -154177868 + MT2B LTR ERVL 146 222 -378 1 680 379 200 0 0 chrX 12472428 12472493 -154177803 + PB1D9 SINE Alu 1 65 -55 1 680 192 200 0 0 chrX 12472518 12472558 -154177738 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 1 680 643 200 78 14 chrX 12472560 12472735 -154177561 - B3A SINE B2 -18 177 2 1 680 1365 277 73 56 chrX 12472736 12473317 -154176979 - L1MA4A LINE L1 -394 5909 5306 1 680 1205 48 0 7 chrX 12473317 12473463 -154176833 - B1_Mus2 SINE Alu 0 147 3 1 680 1365 277 73 56 chrX 12473463 12473523 -154176773 - L1MA4A LINE L1 -998 5305 5257 1 680 680 252 0 26 chrX 12473605 12473756 -154176540 - B1_Mur1 SINE Alu 0 149 3 1 680 783 224 64 17 chrX 12473802 12473975 -154176321 - B3A SINE B2 -16 182 2 1 680 239 270 155 95 chrX 12474457 12474625 -154175671 + B4A SINE B4 44 221 -71 1 680 201 175 25 0 chrX 12474679 12474719 -154175577 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 680 339 25 0 0 chrX 12474855 12474895 -154175401 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 680 644 232 0 31 chrX 12474910 12475039 -154175257 - RSINE1 SINE B4 -38 127 3 1 680 1316 103 0 21 chrX 12475566 12475755 -154174541 + B2_Mm2 SINE B2 3 187 -8 1 680 1050 181 14 38 chrX 12475767 12475980 -154174316 - B3 SINE B2 -8 208 1 1 680 733 245 0 35 chrX 12476015 12476184 -154174112 - RSINE1 SINE B4 0 165 3 1 680 578 254 91 54 chrX 12477124 12477476 -154172820 + ORR1E LTR MaLR 16 361 -9 1 680 402 235 24 0 chrX 12477754 12477839 -154172457 - RSINE1 SINE B4 -76 89 3 1 680 1313 227 168 3 chrX 12478248 12478570 -154171726 + MTE2b LTR MaLR 1 375 -4 1 680 233 294 116 23 chrX 12478765 12478894 -154171402 + LTR33 LTR ERVL 16 156 -359 1 680 442 241 9 0 chrX 12479051 12479163 -154171133 + LTR33 LTR ERVL 403 515 0 1 680 818 176 22 200 chrX 12479579 12479849 -154170447 - URR1A DNA MER1_type 0 226 5 1 680 505 301 97 11 chrX 12480089 12480274 -154170022 + B3 SINE B2 16 216 0 1 680 533 72 270 26 chrX 12480515 12480630 -154169666 - B2_Mm2 SINE B2 -6 189 47 1 680 1349 73 23 0 chrX 12480661 12480838 -154169458 - B2_Mm2 SINE B2 -13 182 2 1 680 223 154 0 0 chrX 12480881 12480920 -154169376 + (CAGAGA)n Simple_repeat Simple_repeat 4 42 0 1 680 3085 138 36 0 chrX 12480990 12481483 -154168813 + Lx7 LINE L1 718 1228 -6500 1 680 10405 138 360 26 chrX 12481535 12482163 -154168133 + Lx7 LINE L1 2383 3004 -2876 1 680 1481 53 21 21 chrX 12482163 12482356 -154167940 + B2_Mm1t SINE B2 1 193 0 1 680 10405 138 360 26 chrX 12482356 12482483 -154167813 + Lx7 LINE L1 3005 3126 -2754 1 680 190 0 32 32 chrX 12482483 12482514 -154167782 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 680 10405 138 360 26 chrX 12482514 12482969 -154167327 + Lx7 LINE L1 3127 4435 -1445 1 680 1341 87 16 11 chrX 12482969 12483154 -154167142 + B2_Mm2 SINE B2 2 187 -8 1 680 10405 161 209 25 chrX 12483154 12486284 -154164012 + Lx7 LINE L1 4436 7696 0 1 680 918 215 5 50 chrX 12486316 12486536 -154163760 + B3 SINE B2 7 216 0 1 680 1290 300 91 27 chrX 12486584 12487481 -154162815 + L1MDa LINE L1 1385 2339 -4294 1 680 304 317 0 0 chrX 12487483 12487565 -154162731 + RSINE1 SINE B4 15 96 -69 1 680 623 205 95 70 chrX 12487636 12487951 -154162345 + L1MDa LINE L1 2328 2650 -3983 1 680 412 240 40 8 chrX 12487964 12488079 -154162217 + B3A SINE B2 1 127 -89 1 680 1360 40 74 6 chrX 12488172 12488347 -154161949 + B2_Mm2 SINE B2 1 187 -8 1 680 777 282 88 31 chrX 12488349 12488733 -154161563 + L1MDa LINE L1 2666 3071 -3466 1 680 3532 67 25 0 chrX 12488782 12489231 -154161065 + L1_Mus1 LINE L1 6108 6567 0 1 680 22 0 0 0 chrX 12489270 12489292 -154161004 + AT_rich Low_complexity Low_complexity 1 22 0 1 680 617 205 47 0 chrX 12489305 12489432 -154160864 + B1_Mur1 SINE Alu 5 137 -12 1 680 207 100 0 0 chrX 12489435 12489465 -154160831 + (CAAG)n Simple_repeat Simple_repeat 2 31 0 1 680 657 69 0 0 chrX 12489480 12489567 -154160729 + (GAAA)n Simple_repeat Simple_repeat 2 88 0 1 680 225 189 26 39 chrX 12489569 12489646 -154160650 + L1_Mur3 LINE L1 3121 3196 -2684 1 680 1306 96 11 0 chrX 12489754 12489931 -154160365 + B2_Mm1t SINE B2 1 179 -14 1 680 344 99 382 36 chrX 12489962 12490072 -154160224 + B2_Mm2 SINE B2 47 194 -1 1 680 374 242 67 73 chrX 12490072 12490237 -154160059 + L1MDa LINE L1 3682 3845 -2692 1 680 1152 81 0 0 chrX 12490239 12490387 -154159909 + B1_Mus1 SINE Alu 1 148 0 1 680 420 55 0 0 chrX 12490394 12490449 -154159847 + (GGGA)n Simple_repeat Simple_repeat 4 58 0 1 680 796 200 200 0 chrX 12490467 12490647 -154159649 + B3 SINE B2 1 216 0 1 680 814 235 110 66 chrX 12490665 12491030 -154159266 + L1MDa LINE L1 3831 4211 -2326 1 680 755 49 0 0 chrX 12491458 12491560 -154158736 + B1_Mm SINE Alu 1 102 -45 1 680 26 0 0 0 chrX 12491801 12491827 -154158469 + AT_rich Low_complexity Low_complexity 1 26 0 1 680 449 18 0 0 chrX 12492197 12492253 -154158043 - B1_Mus2 SINE Alu -78 69 14 1 680 272 141 155 99 chrX 12492253 12492268 -154158028 - MT2B LTR ERVL -375 226 152 1 680 1720 153 102 50 chrX 12492261 12492645 -154157651 - MTD LTR MaLR -14 405 2 1 680 395 233 11 0 chrX 12492649 12492739 -154157557 - RSINE1 SINE B4 -70 95 5 1 680 400 248 135 8 chrX 12493212 12493338 -154156958 - ID_B1 SINE B4 -2 222 81 1 680 600 236 14 2 chrX 12493475 12493630 -154156666 - B3A SINE B2 -51 165 1 1 680 329 250 52 45 chrX 12494259 12494414 -154155882 - LTR33 LTR ERVL -1 514 359 1 680 440 258 76 0 chrX 12494527 12494659 -154155637 - LTR33 LTR ERVL -372 143 2 1 680 363 157 46 46 chrX 12494753 12494840 -154155456 + ID_B1 SINE B4 138 224 0 1 680 415 241 19 0 chrX 12495198 12495306 -154154990 + PB1D10 SINE Alu 8 117 0 1 680 875 144 230 6 chrX 12495312 12495486 -154154810 + B3 SINE B2 2 214 -2 1 680 292 125 0 30 chrX 12495790 12495856 -154154440 + T-rich Low_complexity Low_complexity 2 65 0 1 680 1243 48 0 0 chrX 12495868 12496015 -154154281 - B1_Mus1 SINE Alu 0 148 2 1 680 301 316 0 0 chrX 12496205 12496284 -154154012 + ID4 SINE ID 1 79 -4 1 680 239 173 19 0 chrX 12496288 12496340 -154153956 + GA-rich Low_complexity Low_complexity 2 54 0 1 680 337 172 0 0 chrX 12496361 12496419 -154153877 - ID4_ SINE ID -14 69 12 1 680 887 163 84 0 chrX 12496848 12497014 -154153282 - B2_Mm2 SINE B2 -14 181 2 1 680 930 231 24 19 chrX 12497037 12497249 -154153047 - B3 SINE B2 -3 213 1 1 680 231 273 26 13 chrX 12497310 12497388 -154152908 - RSINE1 SINE B4 -2 163 85 1 680 1234 41 0 0 chrX 12497588 12497734 -154152562 - B1_Mus2 SINE Alu 0 147 2 1 680 323 60 0 20 chrX 12497845 12497896 -154152400 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 680 213 233 30 104 chrX 12497899 12497966 -154152330 - RSINE1 SINE B4 -20 145 84 1 680 1216 48 7 0 chrX 12498089 12498235 -154152061 + B1_Mm SINE Alu 1 147 0 1 680 258 32 0 0 chrX 12498238 12498269 -154152027 + (A)n Simple_repeat Simple_repeat 1 31 0 1 680 765 204 0 21 chrX 12498350 12498495 -154151801 - B1_Mur2 SINE Alu 0 149 8 1 680 308 291 0 134 chrX 12498398 12498517 -154151779 - MT2B LTR ERVL -344 257 155 1 680 326 278 184 20 chrX 12498541 12498835 -154151461 + L1MD LINE L1 4401 4742 -1404 1 680 996 259 49 28 chrX 12498838 12499124 -154151172 + B4A SINE B4 1 292 0 1 680 741 146 36 0 chrX 12499148 12499313 -154150983 + (CA)n Simple_repeat Simple_repeat 1 171 0 1 680 230 191 0 21 chrX 12499319 12499367 -154150929 + (CATATA)n Simple_repeat Simple_repeat 6 52 0 1 680 561 187 33 24 chrX 12499373 12499712 -154150584 + (CA)n Simple_repeat Simple_repeat 1 342 0 1 680 628 281 18 43 chrX 12499721 12499998 -154150298 + L1MD LINE L1 4706 4995 -1151 1 680 678 299 38 29 chrX 12500006 12500319 -154149977 + L1MD LINE L1 5005 5320 -826 1 680 282 270 108 0 chrX 12500735 12500846 -154149450 + L1ME1 LINE L1 5852 5974 -205 2 680 208 135 0 0 chrX 12500969 12501006 -154149290 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 680 419 246 123 31 chrX 12501010 12501140 -154149156 - ID_B1 SINE B4 -3 221 80 4 680 476 292 36 14 chrX 12501198 12501337 -154148959 - RSINE1 SINE B4 -21 144 3 5 680 314 192 123 0 chrX 12501427 12501500 -154148796 + ID2 SINE ID 1 82 -1 6 680 886 204 77 0 chrX 12502213 12502409 -154147887 - B3 SINE B2 -5 211 1 7 680 306 0 0 0 chrX 12502502 12502536 -154147760 + (TC)n Simple_repeat Simple_repeat 2 35 0 8 680 1630 171 72 78 chrX 12502592 12502797 -154147499 - ORR1D1 LTR MaLR -2 372 153 9 680 198 0 0 0 chrX 12502797 12502819 -154147477 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1 680 1378 62 17 6 chrX 12502819 12502997 -154147299 - B2_Mm2 SINE B2 -14 181 2 1 680 188 0 0 69 chrX 12503006 12503035 -154147261 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 1 680 819 207 14 0 chrX 12503036 12503181 -154147115 - B1_Mur2 SINE Alu -2 147 1 1 680 1630 171 72 78 chrX 12503181 12503336 -154146960 - ORR1D1 LTR MaLR -222 152 2 9 680 894 241 13 116 chrX 12503372 12503682 -154146614 - B4A SINE B4 -14 278 1 1 680 572 255 43 86 chrX 12504236 12504566 -154145730 + L1MA5A LINE L1 5428 5794 -503 1 680 576 254 113 26 chrX 12504566 12504760 -154145536 - B3 SINE B2 -5 211 1 1 680 571 256 45 135 chrX 12504760 12504881 -154145415 + L1MA5A LINE L1 5795 5917 -380 1 680 282 345 84 63 chrX 12505093 12505476 -154144820 + L1MB1 LINE L1 178 568 -5499 1 680 413 267 101 22 chrX 12506070 12506208 -154144088 + B3A SINE B2 3 151 -47 1 680 245 246 125 17 chrX 12506287 12506407 -154143889 + L1MB1 LINE L1 2651 2783 -3357 1 680 310 186 8 0 chrX 12506430 12506495 -154143801 + L1MB1 LINE L1 2947 3014 -3126 1 680 1136 83 0 0 chrX 12506610 12506754 -154143542 + B1_Mus2 SINE Alu 2 145 -2 1 680 392 97 16 0 chrX 12506757 12506819 -154143477 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 680 517 324 33 16 chrX 12506820 12507002 -154143294 + B3A SINE B2 27 211 -5 2 680 236 217 0 48 chrX 12507295 12507358 -154142938 + PB1D10 SINE Alu 57 116 -1 2 680 230 207 17 0 chrX 12507493 12507551 -154142745 + B1_Mur4 SINE Alu 1 59 -91 2 680 272 235 17 17 chrX 12507626 12507743 -154142553 + GA-rich Low_complexity Low_complexity 2 118 0 2 680 504 218 16 31 chrX 12507754 12507882 -154142414 + L1MB1 LINE L1 3506 3631 -2509 1 680 1126 62 14 0 chrX 12507893 12508037 -154142259 - B1_Mm SINE Alu 0 147 2 2 680 254 109 0 42 chrX 12508143 12508158 -154142138 + (CTTA)n Simple_repeat Simple_repeat 4 18 0 2 680 1367 62 57 0 chrX 12508158 12508335 -154141961 - B2_Mm1t SINE B2 -6 187 1 2 680 254 109 0 42 chrX 12508335 12508367 -154141929 + (CTTA)n Simple_repeat Simple_repeat 1 31 0 2 680 583 196 58 36 chrX 12508368 12508506 -154141790 - B1_Mur3 SINE Alu -7 142 2 2 680 718 254 72 29 chrX 12508507 12508714 -154141582 - B3 SINE B2 0 216 1 3 680 32 26 0 0 chrX 12508726 12508765 -154141531 + AT_rich Low_complexity Low_complexity 1 39 0 3 680 1035 287 101 22 chrX 12508765 12509268 -154141028 + L1MB1 LINE L1 3698 4240 -1900 1 680 1206 41 0 14 chrX 12509435 12509582 -154140714 + B1_Mus2 SINE Alu 1 145 -2 3 680 252 86 0 0 chrX 12509620 12509655 -154140641 + (CTTG)n Simple_repeat Simple_repeat 1 35 0 3 680 498 236 172 84 chrX 12509772 12509830 -154140466 + B4 SINE B4 2 220 -70 3 680 957 101 0 28 chrX 12509830 12509973 -154140323 + B1_Mur4 SINE Alu 6 144 -6 3 680 324 339 23 62 chrX 12509979 12510155 -154140141 + B4A SINE B4 43 211 -81 3 680 499 128 105 0 chrX 12510154 12510240 -154140056 + B1_Mur4 SINE Alu 43 137 -13 3 680 189 0 26 77 chrX 12510240 12510279 -154140017 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 3 680 1413 291 39 18 chrX 12510418 12510964 -154139332 + L1MB1 LINE L1 4376 4932 -1208 1 680 265 152 0 0 chrX 12510974 12511020 -154139276 + MTD LTR MaLR 374 419 0 3 680 621 286 101 14 chrX 12511020 12511307 -154138989 + L1MB1 LINE L1 4930 5241 -899 1 680 279 279 16 0 chrX 12511336 12511397 -154138899 + RSINE1 SINE B4 4 65 -100 4 680 950 88 0 0 chrX 12511476 12511612 -154138684 + B1_Mus1 SINE Alu 2 137 -11 4 680 897 100 0 0 chrX 12511612 12511742 -154138554 + (GAAAA)n Simple_repeat Simple_repeat 1 130 0 4 680 948 88 13 33 chrX 12511742 12511757 -154138539 + B1_Mur4 SINE Alu 139 150 0 4 680 808 181 177 21 chrX 12511771 12511957 -154138339 + B3 SINE B2 2 216 0 4 680 3250 41 5 10 chrX 12511960 12512356 -154137940 - MTA_Mm LTR MaLR 0 396 3 4 680 241 75 171 43 chrX 12512375 12512445 -154137851 + L1M3 LINE L1 5247 5325 -815 4 680 1188 54 0 7 chrX 12512446 12512595 -154137701 + B1_Mus1 SINE Alu 1 148 0 4 680 268 278 72 81 chrX 12512595 12512830 -154137466 + L1MB1 LINE L1 5296 5528 -646 1 680 1137 62 0 20 chrX 12512880 12513029 -154137267 + B1_Mus1 SINE Alu 2 147 -1 4 680 211 238 38 0 chrX 12513098 12513123 -154137173 + polypyrimidine Low_complexity Low_complexity 57 83 0 4 680 207 0 0 0 chrX 12513123 12513146 -154137150 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 5 680 211 238 38 0 chrX 12513146 12513200 -154137096 + CT-rich Low_complexity Low_complexity 2 56 0 5 680 390 291 45 52 chrX 12513243 12513377 -154136919 - B4A SINE B4 -158 134 2 5 680 356 218 26 0 chrX 12513389 12513467 -154136829 + L1MB1 LINE L1 5692 5771 -397 1 680 632 231 13 52 chrX 12513473 12513557 -154136739 + ID SINE ID 3 80 -144 5 680 221 364 39 39 chrX 12513557 12513660 -154136636 + PB1 SINE Alu 1 103 -24 5 680 587 253 43 43 chrX 12513666 12513852 -154136444 + ID_B1 SINE B4 36 221 -3 5 680 252 261 15 0 chrX 12513871 12513936 -154136360 + L1MB1 LINE L1 6028 6093 -96 1 680 24 53 0 0 chrX 12514206 12514244 -154136052 + GC_rich Low_complexity Low_complexity 1 38 0 5 680 330 132 0 0 chrX 12514560 12514613 -154135683 + (GGA)n Simple_repeat Simple_repeat 3 55 0 5 680 300 240 27 0 chrX 12515689 12515764 -154134532 - ID4_ SINE ID -2 81 5 5 680 251 273 39 0 chrX 12516011 12516088 -154134208 - PB1D10 SINE Alu -6 111 32 5 680 342 188 31 0 chrX 12516539 12516603 -154133693 - B3A SINE B2 -132 66 1 6 680 710 287 12 61 chrX 12516603 12516845 -154133451 - B4A SINE B4 -62 230 1 6 680 358 248 47 16 chrX 12516978 12517103 -154133193 + PB1D10 SINE Alu 2 141 -8 6 680 284 222 0 40 chrX 12517193 12517268 -154133028 + tRNA-Ala-GCY_ tRNA tRNA 2 73 -2 6 680 535 251 79 32 chrX 12517575 12517764 -154132532 + B3A SINE B2 1 198 0 6 680 629 146 0 19 chrX 12517806 12517911 -154132385 - B1_Mus1 SINE Alu -6 142 40 6 680 349 241 12 12 chrX 12517982 12518062 -154132234 - B1_Mur2 SINE Alu -47 102 23 6 680 377 157 205 0 chrX 12518090 12518173 -154132123 - B1_Mur1 SINE Alu -8 141 42 6 680 295 328 0 0 chrX 12518174 12518241 -154132055 + C-rich Low_complexity Low_complexity 1 67 0 6 680 323 203 0 33 chrX 12518243 12518304 -154131992 - PB1D9 SINE Alu -61 59 1 6 680 288 0 0 0 chrX 12518314 12518346 -154131950 + (TTA)n Simple_repeat Simple_repeat 2 33 0 7 680 276 284 29 95 chrX 12518346 12518377 -154131919 - ID SINE ID -145 79 51 7 680 709 144 7 29 chrX 12518362 12518498 -154131798 - B1_Mur4 SINE Alu -9 141 9 7 680 535 214 0 10 chrX 12518787 12518891 -154131405 + B1_Mur1 SINE Alu 10 112 -37 7 680 251 162 27 0 chrX 12518902 12518976 -154131320 + (TCTCTG)n Simple_repeat Simple_repeat 1 76 0 7 680 409 257 30 0 chrX 12519006 12519107 -154131189 + B1F1 SINE Alu 5 108 -41 7 680 507 33 0 0 chrX 12519123 12519184 -154131112 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 680 1224 48 0 0 chrX 12519327 12519473 -154130823 + B1_Mus2 SINE Alu 2 147 0 7 680 462 218 45 0 chrX 12519679 12519789 -154130507 - PB1D7 SINE Alu -5 115 1 7 680 1716 240 133 65 chrX 12519975 12520492 -154129804 - L1MDa LINE L1 -2918 3619 3076 7 680 1149 84 0 0 chrX 12520492 12520634 -154129662 - B1_Mus1 SINE Alu -5 143 2 8 680 1716 240 133 65 chrX 12520634 12520814 -154129482 - L1MDa LINE L1 -3462 3075 2878 7 680 817 177 82 67 chrX 12520814 12521008 -154129288 - B3A SINE B2 0 198 2 8 680 1716 246 134 46 chrX 12521008 12521495 -154128801 - L1MDa LINE L1 -3660 2877 2349 7 680 994 148 112 60 chrX 12522175 12522390 -154127906 + URR1A DNA MER1_type 1 226 0 8 680 381 197 0 0 chrX 12522512 12522578 -154127718 + PB1D10 SINE Alu 1 66 -51 8 680 634 153 160 8 chrX 12522819 12522938 -154127358 + B1_Mur4 SINE Alu 1 137 -13 8 680 291 28 0 0 chrX 12522938 12522974 -154127322 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 8 680 183 42 0 0 chrX 12523246 12523270 -154127026 + (CA)n Simple_repeat Simple_repeat 2 25 0 8 680 825 241 164 4 chrX 12523806 12524044 -154126252 + B4A SINE B4 1 276 -16 8 680 273 119 0 0 chrX 12524058 12524100 -154126196 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 680 384 128 0 0 chrX 12524100 12524178 -154126118 + (GA)n Simple_repeat Simple_repeat 1 78 0 8 680 436 243 139 28 chrX 12524779 12524797 -154125499 - RSINE1 SINE B4 -5 160 145 9 680 300 53 0 0 chrX 12524797 12524835 -154125461 + (TG)n Simple_repeat Simple_repeat 1 38 0 9 680 436 243 139 28 chrX 12524835 12524960 -154125336 - RSINE1 SINE B4 -21 144 1 9 680 1024 112 12 6 chrX 12525014 12525185 -154125111 + (GGGA)n Simple_repeat Simple_repeat 4 175 0 9 680 762 149 329 0 chrX 12526121 12526282 -154124014 + B3 SINE B2 3 216 0 9 680 278 207 17 0 chrX 12526912 12526970 -154123326 + B1F1 SINE Alu 3 61 -88 9 680 225 236 0 35 chrX 12526920 12526977 -154123319 + B4A SINE B4 97 151 -141 9 680 246 304 178 42 chrX 12527030 12527243 -154123053 + MIRb SINE MIR 20 261 -7 9 680 313 278 22 0 chrX 12527496 12527586 -154122710 + GA-rich Low_complexity Low_complexity 1 92 0 9 680 359 244 39 0 chrX 12527609 12527687 -154122609 - ID4_ SINE ID -2 81 1 9 680 397 235 19 56 chrX 12527716 12527824 -154122472 + RSINE1 SINE B4 3 106 -59 9 680 425 0 62 0 chrX 12527828 12527893 -154122403 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 680 353 294 0 34 chrX 12527968 12528056 -154122240 + ID_B1 SINE B4 81 165 -59 1 680 243 137 27 89 chrX 12528090 12528165 -154122131 + GA-rich Low_complexity Low_complexity 2 77 0 1 680 189 0 0 0 chrX 12528165 12528186 -154122110 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 680 342 0 0 0 chrX 12528186 12528223 -154122073 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 680 243 137 27 89 chrX 12528223 12528258 -154122038 + polypurine Low_complexity Low_complexity 78 105 0 1 680 489 311 137 21 chrX 12528315 12528643 -154121653 + MLT1G3 LTR MaLR 59 424 -171 1 680 1243 64 102 17 chrX 12528775 12528792 -154121504 - B2_Mm2 SINE B2 -3 192 176 1 680 1320 95 16 0 chrX 12528792 12528982 -154121314 - B2_Mm1t SINE B2 0 193 1 1 680 1243 64 102 17 chrX 12528982 12529140 -154121156 - B2_Mm2 SINE B2 -20 175 2 1 680 281 151 113 0 chrX 12529517 12529570 -154120726 + B1_Mur4 SINE Alu 51 109 -41 1 680 429 336 0 0 chrX 12529595 12529711 -154120585 + PB1D10 SINE Alu 1 116 -1 1 680 234 278 161 71 chrX 12529711 12529746 -154120550 + B4A SINE B4 86 250 -42 1 680 621 249 24 90 chrX 12529913 12530125 -154120171 - B3A SINE B2 0 198 1 1 680 237 65 0 0 chrX 12530150 12530181 -154120115 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1 680 411 291 7 28 chrX 12530351 12530496 -154119800 - L1MA7 LINE L1 -5 6286 6145 1 680 229 295 0 0 chrX 12530732 12530810 -154119486 - L1M5 LINE L1 -430 5694 5617 1 680 198 0 0 0 chrX 12530826 12530848 -154119448 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1 680 1607 195 26 60 chrX 12530872 12531119 -154119177 - ORR1C1 LTR MaLR 0 378 144 1 680 845 123 62 0 chrX 12531119 12531249 -154119047 - B1_Mur4 SINE Alu -12 138 1 1 680 1607 195 26 60 chrX 12531249 12531383 -154118913 - ORR1C1 LTR MaLR -235 143 10 1 680 629 226 0 0 chrX 12531376 12531491 -154118805 - B1_Mur1 SINE Alu -27 122 8 1 680 425 331 0 23 chrX 12531491 12531506 -154118790 - ID_B1 SINE B4 -21 200 74 1 680 264 209 73 104 chrX 12531627 12531723 -154118573 + B1F SINE Alu 1 93 -56 1 680 243 143 0 0 chrX 12531775 12531817 -154118479 + B1_Mus2 SINE Alu 105 146 -1 1 680 234 62 0 0 chrX 12531847 12531879 -154118417 + (A)n Simple_repeat Simple_repeat 1 32 0 1 680 876 229 4 88 chrX 12532010 12532249 -154118047 + ID_B1 SINE B4 2 220 -4 1 680 872 286 116 19 chrX 12532773 12533143 -154117153 + LTR40b LTR ERVL 57 462 0 1 680 608 209 9 0 chrX 12533349 12533464 -154116832 - PB1D10 SINE Alu -1 116 1 1 680 822 211 113 0 chrX 12533490 12533684 -154116612 - B3 SINE B2 0 216 1 1 680 7891 55 15 0 chrX 12533707 12534695 -154115601 - L1Md_F2 LINE L1 -380 5503 4501 1 680 711 68 0 11 chrX 12534687 12534776 -154115520 + L1Md_F2 LINE L1 5499 5586 -297 1 680 7697 71 9 11 chrX 12534777 12535764 -154114532 + L1Md_F2 LINE L1 5588 6572 -10 1 680 387 117 38 25 chrX 12535877 12535956 -154114340 + (TCTCTG)n Simple_repeat Simple_repeat 5 84 0 1 680 718 100 0 86 chrX 12535956 12536028 -154114268 + polypyrimidine Low_complexity Low_complexity 111 180 0 1 680 1339 185 3 146 chrX 12536028 12536357 -154113939 - B4 SINE B4 -6 286 5 1 680 718 100 0 86 chrX 12536357 12536481 -154113815 + polypyrimidine Low_complexity Low_complexity 1 110 0 1 680 612 175 95 0 chrX 12536488 12536614 -154113682 - B1_Mm SINE Alu -1 146 9 1 680 1011 84 175 0 chrX 12536626 12536780 -154113516 - B2_Mm1a SINE B2 -11 182 2 1 680 282 265 9 101 chrX 12537484 12537593 -154112703 + ID_B1 SINE B4 80 178 -46 1 680 376 204 25 127 chrX 12537496 12537614 -154112682 + B1F SINE Alu 7 112 -5 1 680 1160 276 96 43 chrX 12537694 12537958 -154112338 + Lx7 LINE L1 5278 5563 -284 1 680 2257 123 9 0 chrX 12537958 12538282 -154112014 - ORR1A2 LTR MaLR 0 327 1 1 680 1160 276 90 42 chrX 12538282 12538591 -154111705 + Lx7 LINE L1 5564 5906 -1790 1 680 1238 34 0 7 chrX 12538895 12539043 -154111253 - B1_Mus2 SINE Alu 0 147 1 1 680 3996 161 88 20 chrX 12539043 12539874 -154110422 - RMER19B LTR ERVK -15 887 1 1 680 816 191 0 0 chrX 12539874 12540010 -154110286 + B1_Mur2 SINE Alu 5 140 -9 1 680 225 0 0 0 chrX 12540011 12540036 -154110260 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 680 389 91 0 0 chrX 12540147 12540202 -154110094 + B3 SINE B2 1 55 -161 1 680 267 140 0 0 chrX 12540227 12540277 -154110019 + B3 SINE B2 167 216 0 1 680 891 211 36 10 chrX 12540536 12540728 -154109568 + B3A SINE B2 2 198 0 1 680 687 243 138 0 chrX 12540869 12541058 -154109238 + B3 SINE B2 1 215 -1 1 680 208 152 0 0 chrX 12541064 12541097 -154109199 + A-rich Low_complexity Low_complexity 1 33 0 1 680 357 141 0 59 chrX 12541177 12541245 -154109051 + B1_Mur1 SINE Alu 86 149 0 1 680 417 39 0 0 chrX 12541254 12541305 -154108991 + (GGGGA)n Simple_repeat Simple_repeat 1 51 0 1 680 396 0 0 0 chrX 12541408 12541452 -154108844 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 680 1132 226 84 55 chrX 12542071 12542450 -154107846 + L1MC3 LINE L1 5436 5825 -1960 1 680 395 279 61 0 chrX 12542461 12542608 -154107688 - L1MC3 LINE L1 -1700 6085 5930 1 680 319 269 21 41 chrX 12542779 12542876 -154107420 - PB1 SINE Alu -31 96 2 1 680 650 236 29 0 chrX 12542911 12543051 -154107245 - ID_B1 SINE B4 0 224 81 1 680 1237 262 161 42 chrX 12543101 12543679 -154106617 + L1MC3 LINE L1 5870 6516 -1269 1 680 710 209 68 37 chrX 12543832 12544055 -154106241 + B3A SINE B2 6 216 0 1 680 275 223 69 69 chrX 12544099 12544200 -154106096 + PB1D10 SINE Alu 35 135 -14 1 680 697 295 38 28 chrX 12544337 12544550 -154105746 + B4A SINE B4 2 216 -76 1 680 189 0 0 0 chrX 12544550 12544571 -154105725 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1 680 960 167 66 16 chrX 12544611 12544794 -154105502 - MTD LTR MaLR -14 405 214 1 680 462 226 61 0 chrX 12544771 12544886 -154105410 - MTC-int LTR MaLR -451 807 686 1 680 1546 242 27 22 chrX 12545207 12545578 -154104718 - MTE2a LTR MaLR -4 375 3 1 680 375 266 65 46 chrX 12545581 12545766 -154104530 + L1MB7 LINE L1 4924 5113 -1033 1 680 289 222 0 57 chrX 12545769 12545870 -154104426 + ID4_ SINE ID 23 116 -36 1 680 558 252 0 16 chrX 12546002 12546131 -154104165 + RSINE1 SINE B4 25 151 -14 1 680 1196 248 76 3 chrX 12546219 12546575 -154103721 + L1MB7 LINE L1 5360 5741 -437 1 680 423 290 81 91 chrX 12546605 12546912 -154103384 + ORR1E LTR MaLR 54 357 -2 1 680 519 321 83 64 chrX 12546923 12547342 -154102954 - MLT1C LTR MaLR -2 465 39 1 680 1187 249 59 12 chrX 12547343 12547729 -154102567 + L1MB7 LINE L1 5738 6155 -23 1 680 592 279 96 103 chrX 12547731 12548237 -154102059 + L1MC3 LINE L1 6883 7381 -580 1 680 414 0 0 0 chrX 12548237 12548283 -154102013 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 680 592 279 96 103 chrX 12548283 12548496 -154101800 + L1MC3 LINE L1 7382 7597 -364 1 680 776 150 0 125 chrX 12548557 12548725 -154101571 - URR1A DNA MER1_type -79 147 1 1 680 261 241 66 119 chrX 12548726 12548952 -154101344 + L1MC3 LINE L1 7614 7827 -134 1 680 264 122 0 0 chrX 12549673 12549714 -154100582 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 680 245 222 0 0 chrX 12549791 12549836 -154100460 + B1_Mus1 SINE Alu 1 45 -103 1 680 387 0 0 0 chrX 12549863 12549906 -154100390 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 1 680 31 44 0 0 chrX 12549979 12550024 -154100272 + AT_rich Low_complexity Low_complexity 1 45 0 1 680 1023 108 0 0 chrX 12550078 12550217 -154100079 - B1_Mus1 SINE Alu -9 139 1 1 680 242 286 144 16 chrX 12550218 12550406 -154099890 + Lx7 LINE L1 7479 7690 -6 1 680 539 279 6 64 chrX 12550407 12550579 -154099717 - RSINE1 SINE B4 0 165 4 1 680 361 238 0 24 chrX 12550650 12550732 -154099564 - B1F SINE Alu -1 148 69 1 680 264 326 0 40 chrX 12550732 12550749 -154099547 - ID_B1 SINE B4 0 224 130 1 680 276 30 0 0 chrX 12550867 12550900 -154099396 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 680 788 30 0 0 chrX 12550915 12551016 -154099280 - B1_Mm SINE Alu -5 142 42 1 680 275 138 69 97 chrX 12550953 12551025 -154099271 - RLTR25B LTR ERVK -519 509 440 1 680 438 223 0 58 chrX 12551029 12551276 -154099020 + C-rich Low_complexity Low_complexity 1 232 0 1 680 224 136 23 0 chrX 12551280 12551324 -154098972 - B1_Mus2 SINE Alu -92 55 11 1 680 341 271 104 73 chrX 12551402 12551661 -154098635 + ORR1E LTR MaLR 50 316 -43 1 680 317 232 6 18 chrX 12551757 12551928 -154098368 + (TG)n Simple_repeat Simple_repeat 2 170 0 1 680 371 230 12 12 chrX 12551944 12552111 -154098185 + (TG)n Simple_repeat Simple_repeat 1 167 0 1 680 543 265 80 26 chrX 12552153 12552304 -154097992 - RSINE1 SINE B4 -1 164 6 1 680 1056 88 0 53 chrX 12552409 12552578 -154097718 + B2_Mm2 SINE B2 31 190 -5 1 680 226 236 18 0 chrX 12553817 12553872 -154096424 + 4.5SRNA scRNA scRNA 1 56 -38 1 680 440 221 6 6 chrX 12553972 12554087 -154096209 + RSINE1 SINE B4 28 136 -29 1 680 208 232 36 0 chrX 12554097 12554153 -154096143 + (CATA)n Simple_repeat Simple_repeat 2 59 0 1 680 582 296 123 31 chrX 12554796 12554929 -154095367 + ORR1E LTR MaLR 1 133 -226 1 680 195 42 0 0 chrX 12554929 12554953 -154095343 + (CGGGG)n Simple_repeat Simple_repeat 1 24 0 1 680 582 296 123 31 chrX 12554953 12555137 -154095159 + ORR1E LTR MaLR 134 346 -13 1 680 975 195 70 0 chrX 12556610 12556810 -154093486 - B3 SINE B2 0 216 3 1 680 214 200 22 0 chrX 12558631 12558676 -154091620 + GA-rich Low_complexity Low_complexity 3 48 0 1 680 188 300 33 16 chrX 12558930 12558991 -154091305 + L2 LINE L2 1520 1581 -1838 1 680 914 163 21 0 chrX 12559927 12560068 -154090228 + B1_Mur4 SINE Alu 5 148 -2 1 680 1121 291 85 35 chrX 12560182 12560736 -154089560 + L1MB7 LINE L1 5587 6168 -16 1 680 656 56 0 11 chrX 12560762 12560852 -154089444 + (TTCCC)n Simple_repeat Simple_repeat 2 90 0 1 680 478 241 46 66 chrX 12560881 12561032 -154089264 - B1F SINE Alu -1 148 1 1 680 992 116 7 0 chrX 12561181 12561327 -154088969 + B1_Mus2 SINE Alu 1 147 0 1 680 3002 109 150 124 chrX 12561500 12562180 -154088116 + RMER6A LTR ERVK 59 756 0 1 680 243 0 0 0 chrX 12562441 12562468 -154087828 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2 680 1513 53 26 0 chrX 12562748 12562938 -154087358 - B2_Mm2 SINE B2 0 195 1 2 680 1522 134 62 18 chrX 12563277 12563551 -154086745 + MTC LTR MaLR 136 421 0 2 680 1145 68 0 0 chrX 12563806 12563952 -154086344 + B1_Mus1 SINE Alu 2 147 -1 2 680 216 0 0 0 chrX 12564048 12564072 -154086224 + (TTTTTA)n Simple_repeat Simple_repeat 3 26 0 2 680 1589 48 0 0 chrX 12564446 12564633 -154085663 + B2_Mm1a SINE B2 1 187 -6 2 680 708 253 28 6 chrX 12564646 12564825 -154085471 + B3A SINE B2 1 183 -15 2 680 460 292 125 95 chrX 12565044 12565257 -154085039 - L1_Mur3 LINE L1 -521 5776 5587 2 680 805 209 0 13 chrX 12565257 12565407 -154084889 - B1_Mur1 SINE Alu 0 149 2 2 680 460 295 118 87 chrX 12565407 12565724 -154084572 - L1_Mur3 LINE L1 -711 5586 5197 2 680 623 193 0 48 chrX 12565772 12565897 -154084399 + PB1D9 SINE Alu 2 120 0 2 680 804 201 132 0 chrX 12565903 12566107 -154084189 + Lx9 LINE L1 7354 7584 -60 2 680 669 85 0 0 chrX 12566882 12566988 -154083308 + (TA)n Simple_repeat Simple_repeat 1 106 0 2 680 297 0 0 0 chrX 12566988 12567020 -154083276 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 680 1574 47 11 0 chrX 12567049 12567240 -154083056 + B2_Mm1t SINE B2 1 193 0 2 680 189 0 0 0 chrX 12567500 12567521 -154082775 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 680 306 0 0 0 chrX 12567521 12567554 -154082742 + (GA)n Simple_repeat Simple_repeat 1 34 0 2 680 679 276 77 29 chrX 12567650 12567923 -154082373 - MLT2D LTR ERVL -128 286 1 2 680 357 266 83 21 chrX 12568721 12568817 -154081479 - RSINE1 SINE B4 -188 104 3 2 680 803 248 165 58 chrX 12569429 12570147 -154080149 - L1MB7 LINE L1 -10 6174 5324 2 680 424 286 29 0 chrX 12570171 12570189 -154080107 - PB1D10 SINE Alu -8 109 3 2 680 431 256 0 0 chrX 12570189 12570275 -154080021 - ID_B1 SINE B4 -55 169 84 2 680 431 275 97 32 chrX 12570311 12570465 -154079831 - RSINE1 SINE B4 0 165 2 2 680 663 330 178 16 chrX 12570629 12570953 -154079343 + LTR16A LTR ERVL 1 363 -88 2 680 516 330 47 25 chrX 12570953 12571227 -154079069 - B4A SINE B4 -12 280 1 2 680 663 330 178 16 chrX 12571227 12571278 -154079018 + LTR16A LTR ERVL 364 437 -14 2 680 754 163 0 56 chrX 12571553 12571696 -154078600 + B1_Mur2 SINE Alu 3 137 -12 2 680 228 182 0 0 chrX 12571715 12571759 -154078537 + (ATG)n Simple_repeat Simple_repeat 3 46 0 2 680 343 225 161 9 chrX 12572554 12572666 -154077630 + L1MA4 LINE L1 5813 5941 -359 2 680 828 189 0 26 chrX 12572815 12572967 -154077329 - B1_Mur3 SINE Alu 0 149 2 2 680 333 324 53 101 chrX 12573218 12573407 -154076889 + B3A SINE B2 2 181 -17 2 680 355 284 21 0 chrX 12573499 12573594 -154076702 + RSINE1 SINE B4 46 142 -23 2 680 191 36 0 35 chrX 12573608 12573637 -154076659 + (TAAAA)n Simple_repeat Simple_repeat 4 31 0 2 680 245 296 47 0 chrX 12573648 12573744 -154076552 + B1F SINE Alu 1 100 -20 2 680 329 269 275 20 chrX 12573794 12574041 -154076255 + MLT2E LTR ERVL 1 310 -318 2 680 284 282 24 79 chrX 12574044 12574171 -154076125 + LTR33C LTR ERVL 371 490 -139 2 680 513 0 0 0 chrX 12574851 12574908 -154075388 + (TG)n Simple_repeat Simple_repeat 1 57 0 2 680 215 53 51 51 chrX 12574920 12574979 -154075317 + (TTTG)n Simple_repeat Simple_repeat 1 59 0 2 680 556 253 151 10 chrX 12574979 12575171 -154075125 - B4A SINE B4 -72 220 2 2 680 316 238 124 0 chrX 12575653 12575758 -154074538 + PB1D7 SINE Alu 3 120 0 2 680 332 105 0 34 chrX 12575758 12575783 -154074513 + (GAA)n Simple_repeat Simple_repeat 3 27 0 2 680 1326 78 0 0 chrX 12575783 12575963 -154074333 + (GGA)n Simple_repeat Simple_repeat 1 180 0 2 680 332 105 0 34 chrX 12575963 12575996 -154074300 + (GAA)n Simple_repeat Simple_repeat 1 32 0 2 680 694 223 81 0 chrX 12575997 12576145 -154074151 + B3A SINE B2 1 160 -38 2 680 546 63 0 0 chrX 12576147 12576226 -154074070 + (TCTCTG)n Simple_repeat Simple_repeat 2 80 0 2 680 468 0 0 0 chrX 12576228 12576280 -154074016 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 680 779 261 8 102 chrX 12576330 12576586 -154073710 + B4 SINE B4 11 242 -50 2 680 320 205 128 0 chrX 12576588 12576666 -154073630 + MTE2a LTR MaLR 4 91 -288 2 680 882 155 176 0 chrX 12576666 12576853 -154073443 + URR1B DNA MER1_type 1 220 -5 2 680 991 241 68 50 chrX 12576868 12577105 -154073191 + MTE2a LTR MaLR 69 303 -76 2 680 357 24 0 0 chrX 12577105 12577147 -154073149 + (TAA)n Simple_repeat Simple_repeat 3 44 0 2 680 1438 89 5 0 chrX 12577147 12577338 -154072958 + B2_Mm1a SINE B2 2 193 0 2 680 991 241 68 50 chrX 12577338 12577379 -154072917 + MTE2a LTR MaLR 304 352 -27 2 680 324 267 70 70 chrX 12577660 12577772 -154072524 - MLT1C LTR MaLR -167 300 184 2 680 477 0 0 0 chrX 12577772 12577825 -154072471 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 680 1112 43 43 0 chrX 12577825 12577963 -154072333 - B1_Mus1 SINE Alu -4 144 1 2 680 1381 104 16 0 chrX 12577966 12578158 -154072138 - B2_Mm2 SINE B2 0 195 1 2 680 324 229 180 81 chrX 12578158 12578309 -154071987 - MLT1C LTR MaLR -316 189 27 2 680 401 345 83 49 chrX 12578569 12578834 -154071462 - B4 SINE B4 -16 276 3 2 680 246 226 0 70 chrX 12578944 12579001 -154071295 - B4 SINE B4 -12 280 228 2 680 383 243 9 35 chrX 12579057 12579172 -154071124 - L1MB8 LINE L1 -313 5865 5754 2 680 257 294 93 12 chrX 12579688 12579850 -154070446 - L2a LINE L2 -44 3382 3208 2 680 432 97 0 0 chrX 12579917 12579979 -154070317 + (TCCC)n Simple_repeat Simple_repeat 3 64 0 2 680 610 266 28 0 chrX 12579979 12580122 -154070174 - B1F SINE Alu 0 149 3 2 680 1711 31 0 0 chrX 12580140 12580333 -154069963 - B2_Mm1a SINE B2 0 193 1 2 680 323 254 56 95 chrX 12580337 12580415 -154069881 + L1ME3A LINE L1 6045 6122 -51 2 680 1370 65 21 16 chrX 12580415 12580604 -154069692 + B2_Mm2 SINE B2 1 190 -5 2 680 323 254 56 95 chrX 12580604 12580651 -154069645 + L1ME3A LINE L1 6123 6165 -8 2 680 697 236 34 28 chrX 12580687 12580866 -154069430 + B3A SINE B2 1 180 -18 2 680 453 36 0 0 chrX 12580871 12580926 -154069370 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 680 1064 252 65 4 chrX 12581030 12581305 -154068991 + B4 SINE B4 1 292 0 2 680 224 59 29 0 chrX 12581621 12581655 -154068641 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 2 680 1305 189 107 148 chrX 12581945 12582220 -154068076 - MTC LTR MaLR -14 407 121 2 680 1304 20 0 0 chrX 12582220 12582368 -154067928 + B1_Mus1 SINE Alu 1 148 0 2 680 1305 189 107 148 chrX 12582368 12582503 -154067793 - MTC LTR MaLR -301 120 14 2 680 270 231 0 0 chrX 12582505 12582570 -154067726 + A-rich Low_complexity Low_complexity 1 65 0 2 680 1552 58 16 0 chrX 12582582 12582773 -154067523 + B2_Mm2 SINE B2 1 194 -1 2 681 1254 41 0 0 chrX 12582989 12583136 -154067160 + B1_Mus1 SINE Alu 2 148 0 2 681 357 159 0 0 chrX 12583159 12583222 -154067074 + A-rich Low_complexity Low_complexity 1 63 0 2 681 386 256 85 0 chrX 12583404 12583533 -154066763 + RMER15 LTR ERVL 422 561 -14 2 681 307 315 22 0 chrX 12583573 12583662 -154066634 + ID_B1 SINE B4 83 173 -51 2 681 408 300 0 0 chrX 12583582 12583682 -154066614 + PB1D10 SINE Alu 13 112 -5 2 681 285 29 0 0 chrX 12584221 12584255 -154066041 + (CTG)n Simple_repeat Simple_repeat 3 36 0 2 681 600 14 0 0 chrX 12584257 12584326 -154065970 + (TTC)n Simple_repeat Simple_repeat 2 70 0 2 681 3447 33 2 0 chrX 12585569 12585964 -154064332 - MTA_Mm LTR MaLR 0 396 1 2 681 855 245 5 5 chrX 12585967 12586017 -154064279 + B4A SINE B4 36 85 -207 2 681 197 33 33 0 chrX 12586017 12586047 -154064249 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 681 855 245 5 5 chrX 12586047 12586185 -154064111 + B4A SINE B4 86 223 -69 2 681 228 35 0 0 chrX 12586194 12586223 -154064073 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2 681 209 273 0 0 chrX 12586273 12586317 -154063979 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 681 469 200 49 98 chrX 12586783 12586905 -154063391 + PB1D10 SINE Alu 1 116 -1 2 681 415 269 188 0 chrX 12587123 12587283 -154063013 - ID_B1 SINE B4 -3 221 32 2 681 290 245 102 56 chrX 12587372 12587467 -154062829 - PB1D10 SINE Alu 0 117 15 2 681 392 264 216 11 chrX 12587467 12587643 -154062653 - B3 SINE B2 -4 212 1 2 681 290 245 102 56 chrX 12587643 12587655 -154062641 - PB1D10 SINE Alu -103 14 5 2 681 680 238 12 7 chrX 12587706 12587861 -154062435 + ID_B1 SINE B4 77 230 -62 2 681 229 125 20 59 chrX 12588817 12588868 -154061428 + CT-rich Low_complexity Low_complexity 6 54 0 2 681 1147 88 0 0 chrX 12588909 12589057 -154061239 + B1_Mus1 SINE Alu 1 148 0 2 681 180 0 0 0 chrX 12589057 12589077 -154061219 + (A)n Simple_repeat Simple_repeat 1 20 0 2 681 354 287 9 0 chrX 12589077 12589185 -154061111 - ID_B1 SINE B4 -34 190 82 2 681 404 157 58 129 chrX 12589254 12589393 -154060903 + MT2B LTR ERVL 135 263 -338 2 681 802 147 14 14 chrX 12589290 12589428 -154060868 + B1_Mur1 SINE Alu 9 146 -3 2 681 202 273 0 0 chrX 12589428 12589483 -154060813 + GA-rich Low_complexity Low_complexity 1 55 0 2 681 280 253 253 0 chrX 12589748 12589839 -154060457 + B1F SINE Alu 10 123 -26 2 681 478 296 0 58 chrX 12589867 12590021 -154060275 + RSINE1 SINE B4 21 165 0 2 681 279 186 0 157 chrX 12590098 12590181 -154060115 - ID4_ SINE ID 0 83 14 2 681 439 249 195 6 chrX 12590258 12590432 -154059864 - B3 SINE B2 -9 207 1 2 681 386 264 18 26 chrX 12590475 12590588 -154059708 + ID_B1 SINE B4 113 224 0 2 681 278 284 91 0 chrX 12590635 12590723 -154059573 + PB1 SINE Alu 21 116 -11 2 681 183 42 0 0 chrX 12590725 12590749 -154059547 + (TC)n Simple_repeat Simple_repeat 1 24 0 3 681 1251 41 0 0 chrX 12590801 12590948 -154059348 + B1_Mus1 SINE Alu 2 148 0 3 681 214 280 0 128 chrX 12590978 12591064 -154059232 + B4A SINE B4 81 155 -137 3 681 388 198 11 32 chrX 12591006 12591101 -154059195 + PB1D9 SINE Alu 14 105 -15 3 681 194 62 0 30 chrX 12591101 12591134 -154059162 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 3 681 323 229 25 84 chrX 12591134 12591157 -154059139 + B1_Mur1 SINE Alu 101 125 -24 3 681 2594 133 46 39 chrX 12592167 12592628 -154057668 - RMER4A LTR ERVK 0 466 3 3 681 389 215 160 115 chrX 12592630 12592830 -154057466 + MTEa LTR MaLR 164 372 -7 3 681 1155 75 6 0 chrX 12592940 12593099 -154057197 + B2_Mm1a SINE B2 1 160 -33 3 681 252 0 0 0 chrX 12593099 12593127 -154057169 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 3 681 1013 135 18 0 chrX 12593137 12593307 -154056989 + B2_Mm1t SINE B2 7 179 -14 3 681 307 145 0 52 chrX 12593339 12593397 -154056899 + B2_Mm2 SINE B2 47 101 -94 3 681 1223 42 0 0 chrX 12593430 12593574 -154056722 + B1_Mm SINE Alu 1 144 -3 3 681 213 0 0 75 chrX 12593574 12593614 -154056682 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 3 681 212 125 0 40 chrX 12593755 12593805 -154056491 + T-rich Low_complexity Low_complexity 2 49 0 3 681 1176 81 0 0 chrX 12593808 12593956 -154056340 - B1_Mus1 SINE Alu 0 148 1 3 681 302 115 0 16 chrX 12594065 12594127 -154056169 + (GAA)n Simple_repeat Simple_repeat 3 63 0 3 681 681 267 74 35 chrX 12594137 12594313 -154055983 + ID_B1 SINE B4 6 196 -28 3 681 5052 92 43 21 chrX 12594313 12595034 -154055262 - RMER19A LTR ERVK 0 737 1 3 681 681 267 74 35 chrX 12595034 12595059 -154055237 + ID_B1 SINE B4 197 215 -9 3 681 1187 75 0 0 chrX 12595096 12595243 -154055053 + B1_Mus2 SINE Alu 1 147 0 3 681 474 228 67 91 chrX 12595273 12595481 -154054815 - Charlie1a DNA MER1_type -209 1246 1044 3 681 775 193 177 0 chrX 12595522 12595703 -154054593 - B3 SINE B2 0 216 4 3 681 703 241 120 5 chrX 12595768 12595985 -154054311 - Charlie1a DNA MER1_type -414 1041 800 3 681 768 126 0 52 chrX 12595983 12596117 -154054179 - B1_Mur2 SINE Alu -16 133 7 3 681 1165 226 18 4 chrX 12596145 12596425 -154053871 - Charlie1a DNA MER1_type -706 749 466 3 681 1057 173 66 5 chrX 12596481 12596679 -154053617 + B3 SINE B2 3 212 -4 3 681 332 119 0 17 chrX 12596701 12596761 -154053535 + (GGAA)n Simple_repeat Simple_repeat 3 61 0 3 681 646 298 42 31 chrX 12596923 12597211 -154053085 + B4A SINE B4 2 292 0 3 681 1055 95 13 7 chrX 12597504 12597653 -154052643 + B1_Mur4 SINE Alu 1 150 0 3 681 968 193 14 86 chrX 12597707 12597928 -154052368 + B3 SINE B2 7 211 -5 3 681 431 129 0 51 chrX 12597939 12598037 -154052259 + L1Md_F2 LINE L1 6489 6581 -1 3 681 1379 71 27 0 chrX 12598141 12598324 -154051972 - B2_Mm1a SINE B2 -5 188 1 3 681 25 0 0 0 chrX 12598327 12598352 -154051944 + AT_rich Low_complexity Low_complexity 1 25 0 3 681 720 205 0 0 chrX 12598393 12598564 -154051732 + (TG)n Simple_repeat Simple_repeat 1 171 0 3 681 569 221 32 51 chrX 12598565 12598722 -154051574 - RSINE1 SINE B4 -1 164 11 3 681 602 311 110 29 chrX 12598792 12599100 -154051196 - Lx8 LINE L1 -6 7467 7135 3 681 291 21 0 59 chrX 12599112 12599163 -154051133 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 3 681 1153 37 0 0 chrX 12599163 12599299 -154050997 - B1_Mus2 SINE Alu -10 137 2 3 681 1080 53 13 0 chrX 12599321 12599471 -154050825 - L1_Mus3 LINE L1 -4 6634 6483 3 681 2938 203 159 164 chrX 12599482 12599623 -154050673 - Lx9 LINE L1 0 7644 7459 3 681 393 22 0 0 chrX 12599623 12599669 -154050627 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 681 2938 203 159 164 chrX 12599669 12600852 -154049444 - Lx9 LINE L1 -186 7458 6328 3 681 224 326 39 39 chrX 12601037 12601139 -154049157 - ID_B1 SINE B4 -48 176 75 3 681 494 313 73 15 chrX 12601215 12601689 -154048607 - L1MC4a LINE L1 -2008 5874 5254 3 681 235 218 48 60 chrX 12601870 12601953 -154048343 + MER5A1 DNA MER1_type 1 82 -84 3 681 338 233 122 37 chrX 12602115 12602222 -154048074 + PB1D9 SINE Alu 5 120 0 3 681 21 0 0 0 chrX 12602288 12602309 -154047987 + AT_rich Low_complexity Low_complexity 1 21 0 3 681 660 240 7 32 chrX 12603217 12603372 -154046924 + RSINE1 SINE B4 2 152 -13 3 681 580 267 24 91 chrX 12603422 12603632 -154046664 - B3A SINE B2 0 198 3 3 681 450 155 0 45 chrX 12603775 12603863 -154046433 + RMER1A Other Other 942 1025 -5 3 681 673 263 118 41 chrX 12604248 12604518 -154045778 + B4A SINE B4 2 292 0 3 681 271 316 126 23 chrX 12604557 12604732 -154045564 + L1MC LINE L1 5588 5780 -2102 3 681 218 186 0 0 chrX 12604842 12604885 -154045411 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 681 271 305 12 0 chrX 12604962 12605044 -154045252 + (TG)n Simple_repeat Simple_repeat 2 84 0 3 681 696 160 48 0 chrX 12605175 12605300 -154044996 - B1_Mus2 SINE Alu -1 146 16 3 681 1070 87 0 0 chrX 12605823 12605961 -154044335 - B1_Mus2 SINE Alu -8 139 2 3 681 952 80 72 0 chrX 12606017 12606155 -154044141 + B1_Mus1 SINE Alu 1 148 0 3 681 603 40 0 0 chrX 12606172 12606246 -154044050 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 3 681 264 239 56 14 chrX 12606256 12606328 -154043968 - ID_B1 SINE B4 -20 204 130 3 681 840 309 55 14 chrX 12606376 12606740 -154043556 + Lx9 LINE L1 7181 7559 -85 3 681 25 65 0 0 chrX 12606765 12606811 -154043485 + AT_rich Low_complexity Low_complexity 1 46 0 3 681 837 212 32 50 chrX 12606824 12607042 -154043254 + B4 SINE B4 16 229 -63 3 681 252 59 0 0 chrX 12607083 12607117 -154043179 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 681 374 264 39 55 chrX 12607246 12607374 -154042922 - RMER15 LTR ERVL -154 421 296 3 681 1069 50 36 7 chrX 12607514 12607654 -154042642 + B1_Mus2 SINE Alu 1 144 -3 3 681 594 0 0 0 chrX 12607654 12607720 -154042576 + (GAA)n Simple_repeat Simple_repeat 2 67 0 3 681 306 0 0 0 chrX 12607876 12607910 -154042386 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 681 231 57 86 0 chrX 12607970 12608005 -154042291 + L1MA6 LINE L1 5944 5981 -319 3 681 1261 192 172 102 chrX 12608030 12608430 -154041866 - MT2A LTR ERVL -105 428 1 3 681 835 169 7 20 chrX 12608492 12608643 -154041653 + B1_Mur4 SINE Alu 1 149 -1 3 681 279 181 0 0 chrX 12608646 12608718 -154041578 + A-rich Low_complexity Low_complexity 1 72 0 3 681 1180 36 0 0 chrX 12608721 12608858 -154041438 + B1_Mm SINE Alu 2 138 -9 3 681 1932 212 45 5 chrX 12608979 12609378 -154040918 - MTD LTR MaLR -2 417 3 3 681 257 284 0 15 chrX 12609467 12609535 -154040761 + B4A SINE B4 225 291 -1 3 681 387 300 0 18 chrX 12609713 12609825 -154040471 - MIRb SINE MIR -117 151 42 3 681 438 65 0 0 chrX 12610042 12610104 -154040192 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 681 679 252 74 5 chrX 12611409 12611612 -154038684 - B4A SINE B4 -73 219 3 3 681 613 202 68 45 chrX 12612230 12612406 -154037890 - RLTR42-int LTR ERVK -4124 1398 1219 3 681 284 303 51 39 chrX 12612484 12612796 -154037500 + L1MEc LINE L1 1324 1729 -4686 3 681 486 241 91 91 chrX 12612807 12612994 -154037302 + B4A SINE B4 1 187 -105 3 681 566 183 95 9 chrX 12613013 12613129 -154037167 + B1F2 SINE Alu 11 136 -13 3 681 295 295 27 186 chrX 12613036 12613219 -154037077 + B4A SINE B4 130 283 -9 3 681 1281 106 214 53 chrX 12613302 12613474 -154036822 + Lx9 LINE L1 7296 7502 -142 3 681 444 37 0 0 chrX 12613474 12613528 -154036768 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 681 1160 30 0 7 chrX 12613528 12613664 -154036632 - B1_Mus1 SINE Alu -12 136 2 3 681 1281 106 214 53 chrX 12613664 12613789 -154036507 + Lx9 LINE L1 7503 7641 -3 3 681 465 226 43 75 chrX 12613794 12613864 -154036432 + L1MEc LINE L1 3246 3315 -3004 3 681 456 229 152 35 chrX 12613864 12614009 -154036287 + RSINE1 SINE B4 2 163 -2 3 681 465 226 43 75 chrX 12614009 12614192 -154036104 + L1MEc LINE L1 3316 3491 -2828 3 681 236 167 24 0 chrX 12614909 12614951 -154035345 + L1MEc LINE L1 4696 4738 -1581 3 681 599 248 7 28 chrX 12615032 12615173 -154035123 - B1F2 SINE Alu -5 144 7 3 681 919 92 53 8 chrX 12615313 12615445 -154034851 - B1_Mm SINE Alu 0 147 10 3 681 477 122 0 148 chrX 12615342 12615457 -154034839 - MT2B LTR ERVL -337 264 167 3 681 704 241 50 0 chrX 12615502 12615643 -154034653 - RSINE1 SINE B4 -6 159 12 3 681 1609 32 16 16 chrX 12615697 12615888 -154034408 - B2_Mm1a SINE B2 -2 191 1 3 681 1409 108 5 0 chrX 12615897 12616083 -154034213 - B2_Mm2 SINE B2 -8 187 1 3 681 661 200 0 0 chrX 12616958 12617078 -154033218 - ID_B1 SINE B4 -1 223 104 3 681 523 244 44 30 chrX 12617078 12617089 -154033207 - B1F2 SINE Alu -1 144 12 3 681 235 349 0 0 chrX 12617102 12617188 -154033108 + CT-rich Low_complexity Low_complexity 1 86 0 3 681 321 312 26 0 chrX 12617209 12617286 -154033010 - PB1 SINE Alu -48 79 1 3 681 812 76 30 8 chrX 12617308 12617440 -154032856 - L1_Mus3 LINE L1 -4 6634 6500 3 681 1047 216 63 17 chrX 12617459 12617761 -154032535 - L1MDa LINE L1 -4287 2346 2031 3 681 782 122 29 44 chrX 12618071 12618208 -154032088 + B1_Mur3 SINE Alu 9 143 -6 3 681 739 287 212 68 chrX 12618226 12619644 -154030652 - L1MDa LINE L1 -4987 1646 25 3 681 210 118 0 0 chrX 12619791 12619825 -154030471 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 3 681 246 128 0 0 chrX 12620147 12620186 -154030110 + (T)n Simple_repeat Simple_repeat 1 39 0 3 681 470 248 0 0 chrX 12620186 12620299 -154029997 - PB1D10 SINE Alu 0 117 5 3 681 971 282 99 14 chrX 12620304 12620649 -154029647 - L1ME2 LINE L1 -207 5972 5599 3 681 912 255 22 112 chrX 12620673 12620879 -154029417 - B4A SINE B4 -16 276 88 3 681 445 239 35 17 chrX 12620879 12620994 -154029302 - PB1D9 SINE Alu -1 119 3 3 681 912 255 22 112 chrX 12620994 12621065 -154029231 - B4A SINE B4 -205 87 24 3 681 533 294 65 28 chrX 12621068 12621317 -154028979 - L1ME2 LINE L1 -624 5565 5304 3 681 295 288 0 24 chrX 12621366 12621448 -154028848 + L1MB2 LINE L1 5609 5688 -495 4 681 250 24 23 45 chrX 12621448 12621492 -154028804 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 681 816 10 0 0 chrX 12621492 12621588 -154028708 - B1_Mus2 SINE Alu -10 137 42 4 681 977 233 8 13 chrX 12621720 12621959 -154028337 + L1MB2 LINE L1 5819 6056 -115 4 681 270 316 13 0 chrX 12621959 12622035 -154028261 + ID4 SINE ID 1 77 -6 4 681 740 192 91 10 chrX 12622079 12622251 -154028045 - B3A SINE B2 0 198 30 4 681 393 215 58 11 chrX 12622387 12622515 -154027781 - L1MEc LINE L1 -4514 1901 1767 4 681 798 259 43 34 chrX 12622526 12622768 -154027528 - ID_B1 SINE B4 -45 247 11 4 681 225 0 0 0 chrX 12622896 12622921 -154027375 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 681 369 0 0 0 chrX 12622921 12622961 -154027335 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 681 873 317 65 18 chrX 12623060 12623571 -154026725 + L1M5 LINE L1 4166 4700 -1446 4 681 474 213 172 8 chrX 12623580 12623708 -154026588 + RSINE1 SINE B4 5 153 -12 4 681 270 0 0 0 chrX 12623721 12623751 -154026545 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 681 31 0 0 0 chrX 12623756 12623787 -154026509 + AT_rich Low_complexity Low_complexity 1 31 0 4 681 265 208 250 0 chrX 12624173 12624269 -154026027 - PB1D9 SINE Alu 0 120 1 4 681 355 284 56 63 chrX 12624389 12624532 -154025764 + ID_B1 SINE B4 83 224 0 4 681 572 285 134 92 chrX 12624740 12625173 -154025123 - LTR16A LTR ERVL 0 451 1 4 681 1310 162 167 11 chrX 12625660 12625935 -154024361 - MTD LTR MaLR -61 358 41 4 681 1110 105 14 0 chrX 12627289 12627432 -154022864 + B1_Mus2 SINE Alu 3 147 0 4 681 214 136 0 43 chrX 12627432 12627467 -154022829 + A-rich Low_complexity Low_complexity 14 46 0 4 681 315 337 72 53 chrX 12627474 12627737 -154022559 + L1M5 LINE L1 5512 5779 -345 4 681 752 124 149 0 chrX 12627858 12627979 -154022317 + B1_Mus1 SINE Alu 1 139 -9 4 681 625 305 177 35 chrX 12628254 12628692 -154021604 + MLT1F1 LTR MaLR 20 566 -3 4 681 420 256 28 28 chrX 12629199 12629340 -154020956 + L1MC5 LINE L1 6699 6839 -1122 4 681 410 246 6 96 chrX 12629395 12629552 -154020744 + BC1_Mm scRNA scRNA 3 145 -7 4 681 239 283 78 29 chrX 12629601 12629703 -154020593 + L1MC5 LINE L1 6968 7074 -887 4 681 547 248 307 37 chrX 12630221 12630545 -154019751 + LTR50 LTR ERVL 77 487 -308 4 681 808 143 85 23 chrX 12631283 12631412 -154018884 + B1_Mur4 SINE Alu 1 137 -13 4 681 257 0 30 0 chrX 12631415 12631448 -154018848 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 681 669 286 100 20 chrX 12631806 12632056 -154018240 - LTR75 LTR ERVL -292 270 1 4 681 859 319 57 41 chrX 12632060 12632426 -154017870 - MLT1J1-int LTR MaLR -945 442 71 4 681 431 304 81 137 chrX 12632459 12632688 -154017608 - MLT1J1 LTR MaLR -106 338 138 4 681 923 248 14 32 chrX 12632688 12632905 -154017391 + ID_B1 SINE B4 2 214 -10 4 681 431 304 81 137 chrX 12632905 12633033 -154017263 - MLT1J1 LTR MaLR -307 137 1 4 681 254 200 48 32 chrX 12633110 12633172 -154017124 - L2 LINE L2 -854 2565 2503 4 681 188 410 67 0 chrX 12633191 12633325 -154016971 - L2 LINE L2 -978 2441 2299 4 681 437 311 52 47 chrX 12633356 12633528 -154016768 + MER104 DNA Tc2 6 178 -3 4 681 755 270 6 15 chrX 12633672 12633836 -154016460 + B4 SINE B4 58 217 -75 4 681 1008 212 10 5 chrX 12633836 12634030 -154016266 + B3A SINE B2 1 195 -3 4 681 631 287 5 67 chrX 12634030 12634064 -154016232 + B4A SINE B4 218 246 -46 4 681 252 143 0 0 chrX 12634066 12634108 -154016188 + (TGG)n Simple_repeat Simple_repeat 1 42 0 4 681 260 254 295 47 chrX 12634211 12634360 -154015936 - ID_B1 SINE B4 0 224 39 4 681 574 187 28 18 chrX 12634507 12634616 -154015680 - PB1D9 SINE Alu 0 120 11 4 681 349 200 31 10 chrX 12634616 12634712 -154015584 - L1MCa LINE L1 -3872 2449 2352 4 681 858 194 43 5 chrX 12634834 12635041 -154015255 - L1MCa LINE L1 -4149 2359 2145 4 681 421 232 228 80 chrX 12635059 12635335 -154014961 + Lx8 LINE L1 7155 7471 -2 4 681 2854 156 27 162 chrX 12635369 12635601 -154014695 + RMER15 LTR ERVL 1 217 -358 4 681 1139 82 7 0 chrX 12635601 12635747 -154014549 + B1_Mus1 SINE Alu 2 148 0 4 681 2854 156 27 162 chrX 12635747 12635991 -154014305 + RMER15 LTR ERVL 218 403 -172 4 681 808 44 281 0 chrX 12635991 12636105 -154014191 - B1_Mm SINE Alu 0 147 2 4 681 2854 156 27 162 chrX 12636105 12636292 -154014004 + RMER15 LTR ERVL 404 575 0 4 681 427 274 42 17 chrX 12636292 12636411 -154013885 + PB1 SINE Alu 3 124 -3 4 681 1902 273 133 121 chrX 12636422 12637081 -154013215 - L1MCa LINE L1 -4393 2115 1303 4 681 665 109 254 25 chrX 12637081 12637203 -154013093 + B1_Mur4 SINE Alu 1 150 0 4 681 1902 273 133 121 chrX 12637203 12637220 -154013076 - L1MCa LINE L1 -5206 1302 1300 4 681 626 172 70 189 chrX 12637220 12637464 -154012832 + B3 SINE B2 2 216 0 4 681 1902 273 133 121 chrX 12637464 12637481 -154012815 - L1MCa LINE L1 -5209 1299 1285 4 681 1128 150 194 0 chrX 12637481 12637661 -154012635 - B3 SINE B2 0 216 2 4 681 1902 273 133 121 chrX 12637661 12637807 -154012489 - L1MCa LINE L1 -5224 1284 1148 4 681 207 0 0 0 chrX 12637807 12637830 -154012466 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 4 681 1902 273 133 121 chrX 12637830 12637960 -154012336 - L1MCa LINE L1 -5361 1147 1036 4 681 333 47 0 0 chrX 12637960 12638003 -154012293 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 681 1902 273 133 121 chrX 12638003 12638219 -154012077 - L1MCa LINE L1 -5473 1035 918 4 681 1211 51 0 0 chrX 12638219 12638357 -154011939 - B1_Mm SINE Alu -9 138 1 4 681 1902 273 133 121 chrX 12638357 12639256 -154011040 - L1MCa LINE L1 -5591 917 2 4 681 613 250 37 0 chrX 12639645 12639781 -154010515 + ID_B1 SINE B4 81 221 -3 4 681 729 116 0 9 chrX 12640402 12640515 -154009781 - B1_Mur4 SINE Alu -33 117 6 4 681 243 281 105 90 chrX 12640648 12640781 -154009515 - MamRep434 DNA TcMar -5 421 287 4 681 925 234 53 5 chrX 12641125 12641331 -154008965 - B3 SINE B2 0 216 1 4 681 222 37 0 0 chrX 12641979 12642006 -154008290 + (T)n Simple_repeat Simple_repeat 1 27 0 4 681 1334 27 0 0 chrX 12642006 12642153 -154008143 - B1_Mus1 SINE Alu 0 148 2 4 681 698 246 0 21 chrX 12642447 12642588 -154007708 + B1_Mur2 SINE Alu 3 140 -9 4 681 606 28 0 0 chrX 12642596 12642668 -154007628 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 4 681 517 215 193 7 chrX 12642773 12642923 -154007373 - MTEb LTR MaLR -22 357 180 4 681 443 172 31 33 chrX 12642962 12643076 -154007220 - B1_Mus2 SINE Alu -22 126 1 4 681 323 26 0 0 chrX 12643185 12643223 -154007073 + tRNA-Met_ tRNA tRNA 1 38 -38 4 681 553 260 113 13 chrX 12643331 12643487 -154006809 - Arthur1 DNA Tip100 -357 3590 3415 4 681 1491 60 16 21 chrX 12643487 12643676 -154006620 - B2_Mm2 SINE B2 -7 188 1 4 681 553 260 113 13 chrX 12643676 12643757 -154006539 - Arthur1 DNA Tip100 -533 3414 3330 4 681 1344 91 43 0 chrX 12644023 12644210 -154006086 - B2_Mm2 SINE B2 0 195 1 4 681 21 0 0 0 chrX 12644233 12644254 -154006042 + AT_rich Low_complexity Low_complexity 1 21 0 4 681 244 254 152 0 chrX 12644813 12644872 -154005424 - ID4_ SINE ID -13 70 3 4 681 1769 257 164 31 chrX 12644891 12645643 -154004653 - L1MB4 LINE L1 -10 6170 5319 4 681 326 282 7 62 chrX 12645659 12645806 -154004490 - PB1D10 SINE Alu 0 149 20 4 681 279 0 0 0 chrX 12645859 12645890 -154004406 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 681 794 195 0 86 chrX 12645891 12646054 -154004242 - RSINE1 SINE B4 -15 150 2 4 681 275 163 20 0 chrX 12646096 12646145 -154004151 - B1_Mur4 SINE Alu -9 141 92 4 681 276 231 79 47 chrX 12646145 12646272 -154004024 - L1MB4 LINE L1 -816 5324 5194 4 681 284 100 80 0 chrX 12646288 12646338 -154003958 - L1MA5 LINE L1 -2 6298 6245 4 681 560 267 64 39 chrX 12646387 12646590 -154003706 - L1MB4 LINE L1 -1856 4290 4083 4 681 241 304 126 33 chrX 12646630 12646767 -154003529 + MIRc SINE MIR 77 220 -48 4 681 1391 101 0 16 chrX 12647037 12647228 -154003068 + B2_Mm2 SINE B2 2 189 -6 4 681 279 225 0 0 chrX 12648651 12648722 -154001574 + (CCG)n Simple_repeat Simple_repeat 1 71 0 4 681 185 61 0 83 chrX 12648732 12648768 -154001528 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 4 681 240 35 0 0 chrX 12649768 12649797 -154000499 + (GGA)n Simple_repeat Simple_repeat 2 30 0 4 681 213 128 26 0 chrX 12649856 12649895 -154000401 + G-rich Low_complexity Low_complexity 6 45 0 4 681 695 220 173 0 chrX 12651725 12651893 -153998403 + B3A SINE B2 1 197 -1 4 681 1171 112 44 22 chrX 12651900 12652082 -153998214 + B2_Mm2 SINE B2 2 187 -8 4 681 235 254 33 83 chrX 12653165 12653225 -153997071 - ID2 SINE ID -25 58 2 4 681 1367 97 16 16 chrX 12653233 12653421 -153996875 - B2_Mm2 SINE B2 -6 189 2 4 681 421 264 90 30 chrX 12653534 12653667 -153996629 - B1F2 SINE Alu -8 141 1 4 681 520 266 50 31 chrX 12653667 12653685 -153996611 - ID_B1 SINE B4 0 185 75 4 681 241 162 0 0 chrX 12653812 12653849 -153996447 - U2 snRNA snRNA -151 37 1 4 681 200 267 0 0 chrX 12654463 12654508 -153995788 - L2a LINE L2 -13 3413 3369 4 681 184 277 30 30 chrX 12654520 12654587 -153995709 + MIR3 SINE MIR 135 201 -7 4 681 754 187 42 28 chrX 12654740 12654883 -153995413 - B1F2 SINE Alu -4 145 1 4 681 298 259 100 11 chrX 12655011 12655101 -153995195 + PB1D7 SINE Alu 15 112 -8 4 681 305 237 296 10 chrX 12655281 12655379 -153994917 - RSINE1 SINE B4 -36 129 4 4 681 398 314 15 83 chrX 12655407 12655539 -153994757 + B2_Mm2 SINE B2 4 126 -69 4 681 301 229 14 41 chrX 12655706 12655779 -153994517 - B1F1 SINE Alu -35 114 44 4 681 605 262 55 77 chrX 12655780 12655932 -153994364 - B3A SINE B2 -6 192 40 4 681 1256 61 0 0 chrX 12655932 12656079 -153994217 - B1_Mus1 SINE Alu 0 148 2 4 681 605 262 55 77 chrX 12656079 12656108 -153994188 - B3A SINE B2 -159 39 15 4 681 612 199 84 42 chrX 12656160 12656302 -153993994 - B1_Mus1 SINE Alu 0 148 1 4 681 243 278 13 65 chrX 12656568 12656645 -153993651 - ID4_ SINE ID 0 83 11 4 681 1411 81 37 5 chrX 12656737 12656924 -153993372 - B2_Mm2 SINE B2 0 195 3 4 681 448 183 59 126 chrX 12657059 12657178 -153993118 + PB1D9 SINE Alu 1 111 -9 4 681 188 0 74 0 chrX 12657178 12657205 -153993091 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 681 1219 56 0 20 chrX 12657314 12657460 -153992836 - B1_Mus2 SINE Alu -3 144 2 4 681 1179 201 136 0 chrX 12657662 12657926 -153992370 - Lx5 LINE L1 0 7050 6751 4 681 219 274 73 146 chrX 12658036 12658173 -153992123 - MIRb SINE MIR -132 136 10 5 681 475 147 13 0 chrX 12658689 12658764 -153991532 - MER58D DNA MER1_type -8 378 303 5 681 180 0 0 0 chrX 12658924 12658944 -153991352 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 5 681 329 224 122 0 chrX 12659009 12659107 -153991189 - MER5A DNA MER1_type -34 155 46 5 681 931 53 0 0 chrX 12659294 12659407 -153990889 + B1_Mus2 SINE Alu 26 138 -9 5 681 216 0 0 0 chrX 12659407 12659431 -153990865 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 681 842 267 78 0 chrX 12659954 12660160 -153990136 - ID_B1 SINE B4 -1 223 2 5 681 414 185 78 69 chrX 12660323 12660439 -153989857 - PB1D10 SINE Alu 0 117 1 5 681 308 286 9 95 chrX 12660458 12660574 -153989722 - B1F SINE Alu -43 106 1 5 681 2141 62 93 3 chrX 12661148 12661439 -153988857 - L1_Mus3 LINE L1 -4 6634 6318 5 681 222 280 0 20 chrX 12661527 12661578 -153988718 + ID2 SINE ID 34 83 0 5 681 274 331 126 55 chrX 12661706 12661888 -153988408 - MER20 DNA MER1_type -4 215 21 5 681 679 257 273 22 chrX 12662130 12662357 -153987939 + B4 SINE B4 1 284 -8 5 681 186 229 0 0 chrX 12662468 12662503 -153987793 + L3 LINE CR1 3512 3546 -943 5 681 209 225 25 112 chrX 12662474 12662554 -153987742 + MIRm SINE MIR 65 137 -139 5 681 1013 167 32 11 chrX 12662863 12663051 -153987245 - B2_Mm2 SINE B2 -3 192 1 5 681 362 291 13 0 chrX 12663413 12663492 -153986804 - ID4 SINE ID -3 80 1 5 681 318 26 0 0 chrX 12663752 12663791 -153986505 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 5 681 210 128 0 0 chrX 12663799 12663838 -153986458 + (T)n Simple_repeat Simple_repeat 1 39 0 5 681 600 177 70 17 chrX 12663842 12663957 -153986339 - B1_Mur3 SINE Alu 0 149 29 5 681 278 271 43 70 chrX 12663878 12663993 -153986303 - MT2B LTR ERVL -337 264 153 5 681 268 324 79 34 chrX 12663984 12664117 -153986179 + B3 SINE B2 62 197 -1 5 681 22 0 0 0 chrX 12664658 12664680 -153985616 + AT_rich Low_complexity Low_complexity 1 22 0 5 681 946 129 50 7 chrX 12664701 12664842 -153985454 + B1_Mus2 SINE Alu 1 147 0 5 681 389 199 191 0 chrX 12664857 12664988 -153985308 + L1MB8 LINE L1 5742 5897 -281 5 681 282 238 102 47 chrX 12665112 12665240 -153985056 + L1MB8 LINE L1 6022 6156 -22 5 681 594 148 270 0 chrX 12665468 12665583 -153984713 + B1_Mus1 SINE Alu 1 146 -2 5 681 27 29 0 0 chrX 12666123 12666157 -153984139 + AT_rich Low_complexity Low_complexity 1 34 0 5 681 30 27 0 0 chrX 12666490 12666527 -153983769 + AT_rich Low_complexity Low_complexity 1 37 0 5 681 705 190 33 0 chrX 12666561 12666682 -153983614 - B1_Mus2 SINE Alu -20 127 3 5 681 402 305 22 30 chrX 12666564 12666699 -153983597 - ID_B1 SINE B4 -21 203 70 5 681 342 45 0 0 chrX 12666786 12666830 -153983466 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 681 247 311 83 77 chrX 12667526 12667707 -153982589 - Tigger9a DNA Tigger -3 729 548 5 681 722 216 0 41 chrX 12667696 12667841 -153982455 + B1_Mus1 SINE Alu 10 148 0 5 681 416 134 89 40 chrX 12668090 12668191 -153982105 - L1MB3 LINE L1 -201 5982 5877 5 681 22 0 0 0 chrX 12668191 12668213 -153982083 + AT_rich Low_complexity Low_complexity 1 22 0 5 681 635 196 58 36 chrX 12668249 12668387 -153981909 - B1_Mur1 SINE Alu -6 143 3 5 681 396 0 0 0 chrX 12668809 12668853 -153981443 + (TC)n Simple_repeat Simple_repeat 1 44 0 5 681 1132 70 0 0 chrX 12668854 12668997 -153981299 - B1_Mus1 SINE Alu -4 144 2 5 681 222 121 30 15 chrX 12669060 12669127 -153981169 + T-rich Low_complexity Low_complexity 1 68 0 5 681 411 254 144 61 chrX 12669175 12669439 -153980857 - L1M4b LINE L1 -5653 1681 1396 5 681 367 341 53 26 chrX 12669460 12669650 -153980646 - L1M4b LINE L1 -5887 1447 1253 5 681 968 302 187 35 chrX 12669738 12670311 -153979985 - L1M4b LINE L1 -6248 1086 427 5 681 353 329 65 6 chrX 12671661 12671829 -153978467 + MIR SINE MIR 19 196 -66 5 681 27 29 0 0 chrX 12671956 12671990 -153978306 + AT_rich Low_complexity Low_complexity 1 34 0 5 681 832 208 0 0 chrX 12672183 12672332 -153977964 - B1_Mur2 SINE Alu 0 149 1 5 681 414 307 50 63 chrX 12672561 12672857 -153977439 - L1M5 LINE L1 -2797 3349 3054 5 681 935 154 0 13 chrX 12672857 12673008 -153977288 - B1_Mur4 SINE Alu -1 149 1 5 681 348 310 75 69 chrX 12673008 12673030 -153977266 - L1M5 LINE L1 -3093 3053 3029 5 681 503 274 40 16 chrX 12673683 12673809 -153976487 - B1F2 SINE Alu -8 141 13 5 681 432 99 0 0 chrX 12674152 12674223 -153976073 + (TG)n Simple_repeat Simple_repeat 1 71 0 5 681 431 310 48 61 chrX 12674223 12674388 -153975908 - B3A SINE B2 -34 164 2 5 681 374 302 40 48 chrX 12674430 12674555 -153975741 - RSINE1 SINE B4 -39 126 3 5 681 1160 49 86 0 chrX 12674860 12675023 -153975273 + B2_Mm2 SINE B2 8 184 -11 5 681 300 247 211 99 chrX 12676197 12676368 -153973928 + B3 SINE B2 2 191 -4 5 681 703 276 0 0 chrX 12676485 12676630 -153973666 + B1_Mm SINE Alu 1 145 -2 5 681 242 259 0 18 chrX 12678203 12678258 -153972038 - RSINE1 SINE B4 -53 112 59 5 681 33 35 0 17 chrX 12678300 12678342 -153971954 + AT_rich Low_complexity Low_complexity 1 42 0 5 681 1095 65 0 0 chrX 12678342 12678480 -153971816 + B1_Mus1 SINE Alu 4 141 -7 5 681 33 35 0 17 chrX 12678480 12678495 -153971801 + AT_rich Low_complexity Low_complexity 1 15 0 5 681 252 0 0 0 chrX 12678495 12678523 -153971773 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 681 269 68 23 0 chrX 12678523 12678566 -153971730 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 681 1073 72 0 0 chrX 12678801 12678940 -153971356 - B1_Mus1 SINE Alu -4 144 6 5 681 421 253 20 31 chrX 12679449 12679547 -153970749 + RSINE1 SINE B4 47 143 -22 5 681 24 0 0 0 chrX 12680032 12680056 -153970240 + AT_rich Low_complexity Low_complexity 1 24 0 5 681 402 274 0 89 chrX 12680064 12680188 -153970108 + B3A SINE B2 2 114 -84 5 681 784 51 246 0 chrX 12680688 12680806 -153969490 + B1_Mus1 SINE Alu 2 148 0 5 681 34 0 0 0 chrX 12680806 12680840 -153969456 + AT_rich Low_complexity Low_complexity 1 34 0 5 681 247 253 130 26 chrX 12680895 12680972 -153969324 - MER104 DNA Tc2 0 181 97 5 681 270 0 0 0 chrX 12682427 12682457 -153967839 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 681 1199 29 0 0 chrX 12682457 12682597 -153967699 - B1_Mus1 SINE Alu -8 140 1 5 681 1066 93 0 0 chrX 12682634 12682773 -153967523 + B1_Mus1 SINE Alu 2 140 -8 5 681 21 57 0 0 chrX 12682784 12682819 -153967477 + AT_rich Low_complexity Low_complexity 1 35 0 5 681 639 231 38 23 chrX 12682861 12682994 -153967302 - B1_Mur3 SINE Alu -13 136 2 5 681 868 231 60 5 chrX 12683107 12683307 -153966989 + B3 SINE B2 2 212 -4 5 681 590 266 43 109 chrX 12684384 12684595 -153965701 + B3A SINE B2 1 197 -1 5 681 862 63 0 0 chrX 12684602 12684713 -153965583 + B1_Mus2 SINE Alu 35 145 -2 5 681 349 220 78 20 chrX 12685537 12685639 -153964657 + PB1D9 SINE Alu 5 112 -8 5 681 912 50 25 0 chrX 12686562 12686683 -153963613 - B1_Mm SINE Alu -1 146 23 5 681 301 324 0 62 chrX 12686909 12687021 -153963275 + PB1D10 SINE Alu 2 106 -11 5 681 280 270 25 75 chrX 12689012 12689092 -153961204 + ID4_ SINE ID 5 80 -3 5 681 276 267 138 16 chrX 12689096 12689338 -153960958 + L1ME3A LINE L1 5664 5941 -232 5 681 2756 42 96 8 chrX 12689401 12689765 -153960531 - MTA_Mm LTR MaLR 0 396 1 5 681 858 55 0 0 chrX 12690011 12690121 -153960175 - B1_Mus2 SINE Alu 0 147 38 5 681 314 240 85 69 chrX 12690054 12690184 -153960112 - RLTR25B LTR ERVK -519 509 378 5 681 372 232 26 14 chrX 12690524 12690634 -153959662 - B1_Mur2 SINE Alu -5 143 36 5 681 981 86 182 18 chrX 12692129 12692294 -153958002 - B2_Mm2 SINE B2 -3 192 1 5 681 647 264 0 39 chrX 12692328 12692482 -153957814 + B1_Mur1 SINE Alu 2 149 0 5 681 590 298 73 52 chrX 12692525 12692716 -153957580 + B3 SINE B2 1 195 0 5 681 27 29 0 0 chrX 12693226 12693260 -153957036 + AT_rich Low_complexity Low_complexity 1 34 0 5 681 450 280 93 0 chrX 12693286 12693404 -153956892 - RSINE1 SINE B4 -35 130 2 5 681 27 0 0 0 chrX 12693949 12693976 -153956320 + AT_rich Low_complexity Low_complexity 1 27 0 5 681 7079 105 35 23 chrX 12693981 12695135 -153955161 - Lx3A LINE L1 -4 6977 5810 5 681 442 236 11 22 chrX 12695145 12695236 -153955060 - B1_Mur3 SINE Alu -58 91 2 5 681 316 331 224 31 chrX 12695826 12696215 -153954081 + L1M4b LINE L1 101 564 -6770 5 681 387 289 224 3 chrX 12696565 12696916 -153953380 + L1M4b LINE L1 6171 6599 -439 5 681 1118 55 7 20 chrX 12696933 12697081 -153953215 + B1_Mus1 SINE Alu 3 148 0 5 681 529 204 90 27 chrX 12697173 12697284 -153953012 + PB1D9 SINE Alu 2 119 -1 5 681 351 148 0 53 chrX 12697354 12697411 -153952885 + HAL1-3A_ME LINE L1 1975 2028 -830 5 681 561 308 44 6 chrX 12697430 12697590 -153952706 - B3 SINE B2 -50 166 1 5 681 603 217 20 55 chrX 12697826 12697972 -153952324 - B1_Mur1 SINE Alu 0 149 9 5 681 242 367 24 109 chrX 12697831 12697996 -153952300 - B4A SINE B4 -72 220 70 5 681 301 292 147 13 chrX 12698117 12698273 -153952023 + L1MD3 LINE L1 7407 7583 -412 5 681 1344 57 0 33 chrX 12699448 12699630 -153950666 - B2_Mm1t SINE B2 -17 176 1 5 681 455 107 0 13 chrX 12700028 12700104 -153950192 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 5 681 353 111 0 0 chrX 12700118 12700172 -153950124 - B1_Mus2 SINE Alu -1 146 93 6 681 227 176 0 89 chrX 12701149 12701205 -153949091 + B1F SINE Alu 97 147 -2 6 681 387 185 30 71 chrX 12701798 12701897 -153948399 + MT2B LTR ERVL 145 239 -362 6 681 803 81 81 0 chrX 12701829 12701952 -153948344 + B1_Mus1 SINE Alu 16 148 0 6 681 198 0 0 0 chrX 12701952 12701974 -153948322 + (A)n Simple_repeat Simple_repeat 1 22 0 6 681 210 387 20 51 chrX 12702095 12702193 -153948103 + B1F SINE Alu 1 95 -54 6 681 674 48 282 0 chrX 12703187 12703290 -153947006 + B1_Mus2 SINE Alu 1 132 -15 6 681 225 0 0 0 chrX 12703292 12703317 -153946979 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 6 681 488 319 12 18 chrX 12703326 12703489 -153946807 - RSINE1 SINE B4 -2 163 2 6 681 391 318 63 69 chrX 12703624 12703813 -153946483 - B4A SINE B4 -104 188 1 6 681 459 273 7 114 chrX 12703848 12703997 -153946299 + B1_Mur1 SINE Alu 17 149 0 6 681 730 256 11 67 chrX 12704028 12704208 -153946088 - B3 SINE B2 0 216 47 6 681 580 212 51 0 chrX 12704445 12704582 -153945714 + B1_Mur1 SINE Alu 3 146 -3 6 681 1182 47 0 20 chrX 12704700 12704851 -153945445 - B1_Mus1 SINE Alu 0 148 1 6 681 1056 224 9 18 chrX 12705777 12705995 -153944301 - B3 SINE B2 0 216 1 6 681 1655 31 0 0 chrX 12706431 12706622 -153943674 - B2_Mm1a SINE B2 -2 191 1 6 681 1104 75 0 0 chrX 12706644 12706790 -153943506 + B1_Mus2 SINE Alu 1 146 -1 6 681 297 336 35 0 chrX 12707556 12707669 -153942627 + Cheshire DNA MER1_type 2 118 -2302 6 681 418 248 240 0 chrX 12707686 12707807 -153942489 + RSINE1 SINE B4 9 158 -7 6 681 22 0 0 0 chrX 12707808 12707830 -153942466 + AT_rich Low_complexity Low_complexity 1 22 0 6 681 250 236 14 14 chrX 12708202 12708275 -153942021 + CT-rich Low_complexity Low_complexity 1 73 0 6 681 501 196 68 10 chrX 12708275 12708378 -153941918 - PB1D9 SINE Alu 0 120 12 6 681 283 286 45 56 chrX 12710046 12710135 -153940161 + PB1D7 SINE Alu 33 120 0 6 681 25 83 0 0 chrX 12710262 12710322 -153939974 + AT_rich Low_complexity Low_complexity 1 60 0 6 681 690 144 98 77 chrX 12710361 12710504 -153939792 - B1_Mur3 SINE Alu -1 148 3 6 681 244 216 0 73 chrX 12710693 12710748 -153939548 - B3A SINE B2 -66 132 82 6 681 394 226 115 19 chrX 12710819 12710923 -153939373 + PB1D10 SINE Alu 1 114 -3 6 681 1375 74 26 5 chrX 12711015 12711205 -153939091 - B2_Mm2 SINE B2 0 195 2 6 681 347 343 0 37 chrX 12711259 12711368 -153938928 + PB1D7 SINE Alu 4 108 -12 6 681 21 57 0 0 chrX 12711726 12711761 -153938535 + AT_rich Low_complexity Low_complexity 1 35 0 6 681 216 0 0 0 chrX 12712224 12712248 -153938048 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 681 941 170 86 20 chrX 12712302 12712500 -153937796 - B3 SINE B2 -4 212 2 6 681 189 0 0 0 chrX 12712656 12712677 -153937619 + (T)n Simple_repeat Simple_repeat 1 21 0 6 681 189 0 0 0 chrX 12712758 12712779 -153937517 + (TG)n Simple_repeat Simple_repeat 1 21 0 6 681 1108 35 43 0 chrX 12712803 12712944 -153937352 - B1_Mus2 SINE Alu 0 147 1 6 681 306 247 123 0 chrX 12712976 12713057 -153937239 + PB1D10 SINE Alu 21 111 -6 6 681 555 211 18 0 chrX 12713159 12713268 -153937028 + PB1D9 SINE Alu 8 118 -2 6 681 739 257 42 28 chrX 12713750 12713962 -153936334 - B3 SINE B2 0 216 2 6 682 2773 96 13 48 chrX 12715352 12715477 -153934819 - L1_Mus3 LINE L1 -2 6636 6518 6 682 1210 126 33 0 chrX 12715477 12715660 -153934636 - B2_Mm1t SINE B2 -4 189 1 6 682 2773 96 13 48 chrX 12715660 12715992 -153934304 - L1_Mus3 LINE L1 -121 6517 6195 6 682 612 260 13 27 chrX 12716027 12716177 -153934119 + B1_Mur2 SINE Alu 2 149 0 6 682 614 231 7 69 chrX 12716240 12716384 -153933912 + B1_Mur3 SINE Alu 15 149 0 6 682 682 124 7 70 chrX 12716537 12716664 -153933632 + B1_Mus1 SINE Alu 3 130 -20 6 682 450 240 104 0 chrX 12717866 12717962 -153932334 + PB1D9 SINE Alu 1 106 -14 6 682 928 281 77 88 chrX 12718148 12718231 -153932065 - ORR1E LTR MaLR 0 359 273 6 682 1198 28 7 0 chrX 12718231 12718375 -153931921 + B1_Mm SINE Alu 2 146 -1 6 682 928 281 77 88 chrX 12718375 12718654 -153931642 - ORR1E LTR MaLR -87 272 1 6 682 300 210 90 0 chrX 12719080 12719180 -153931116 - Lx9 LINE L1 0 7644 7536 6 682 8521 88 74 21 chrX 12719201 12720522 -153929774 - Lx3A LINE L1 -4 6977 5587 6 682 3621 80 20 6 chrX 12720568 12721073 -153929223 + L1_Mur1 LINE L1 5072 5583 -303 6 682 574 270 36 94 chrX 12721661 12721853 -153928443 + ID_B1 SINE B4 37 217 -7 6 682 1464 48 32 5 chrX 12721916 12722105 -153928191 - B2_Mm2 SINE B2 0 195 2 6 682 246 323 52 22 chrX 12722570 12722706 -153927590 - MER2 DNA MER2_type -34 311 172 6 682 293 190 0 33 chrX 12722948 12723008 -153927288 - Charlie12 DNA MER1_type -6 2867 2810 6 682 364 241 83 9 chrX 12723050 12723159 -153927137 - PB1D10 SINE Alu 0 117 1 6 682 1304 80 17 0 chrX 12723378 12723554 -153926742 + B2_Mm1t SINE B2 1 179 -14 6 682 215 179 0 25 chrX 12723561 12723601 -153926695 + ID2 SINE ID 39 77 -6 6 682 459 76 377 0 chrX 12723567 12723668 -153926628 + B2_Mm2 SINE B2 46 189 -6 6 682 325 241 24 0 chrX 12724264 12724347 -153925949 - L1M4 LINE L1 -433 5738 5654 6 682 547 231 99 0 chrX 12724421 12724542 -153925754 - B1_Mur2 SINE Alu 0 149 17 6 682 502 302 144 34 chrX 12724548 12724895 -153925401 - L1M4 LINE L1 -840 5306 4927 6 682 303 247 38 85 chrX 12725405 12725511 -153924785 - L1MC5 LINE L1 -163 7798 7698 6 682 616 86 232 64 chrX 12726029 12726154 -153924142 + B1_Mus1 SINE Alu 3 148 0 6 682 204 111 0 0 chrX 12726333 12726369 -153923927 + (T)n Simple_repeat Simple_repeat 1 36 0 6 682 556 197 142 2 chrX 12726455 12726582 -153923714 + B1_Mus1 SINE Alu 7 149 0 6 682 242 325 0 12 chrX 12726651 12726732 -153923564 + ID4_ SINE ID 1 80 -3 6 682 416 245 70 20 chrX 12727128 12727228 -153923068 - PB1D10 SINE Alu -1 116 12 6 682 267 374 10 29 chrX 12727144 12727246 -153923050 - ID_B1 SINE B4 -47 177 78 6 682 1153 55 7 0 chrX 12727581 12727727 -153922569 - B1_Mus1 SINE Alu 0 148 2 6 682 1135 56 14 0 chrX 12729078 12729222 -153921074 - B1_Mur4 SINE Alu -2 148 3 6 682 558 288 35 12 chrX 12729339 12729511 -153920785 + B3 SINE B2 1 176 -40 6 682 750 77 248 0 chrX 12729703 12729820 -153920476 + B1_Mus1 SINE Alu 2 147 -1 6 682 831 260 16 42 chrX 12729830 12730019 -153920277 + B3 SINE B2 27 210 -6 6 682 396 248 217 20 chrX 12730024 12730176 -153920120 + B3A SINE B2 16 197 -1 6 682 1202 48 7 0 chrX 12730358 12730505 -153919791 + B1_Mus1 SINE Alu 1 148 0 6 682 1305 81 16 16 chrX 12730523 12730711 -153919585 + B2_Mm2 SINE B2 2 189 -6 6 682 523 170 78 20 chrX 12730872 12730974 -153919322 - B1_Mus2 SINE Alu 0 147 40 6 682 180 0 0 0 chrX 12731453 12731473 -153918823 + (GA)n Simple_repeat Simple_repeat 2 21 0 6 682 22 56 0 0 chrX 12731661 12731697 -153918599 + AT_rich Low_complexity Low_complexity 1 36 0 6 682 1302 108 0 0 chrX 12732308 12732494 -153917802 + B2_Mm2 SINE B2 1 186 -9 6 682 667 301 25 25 chrX 12732508 12732668 -153917628 + B3 SINE B2 1 160 -56 6 682 471 271 56 0 chrX 12732857 12732964 -153917332 + B1F SINE Alu 5 117 -32 6 682 260 328 30 0 chrX 12732969 12733036 -153917260 + ID4_ SINE ID 2 70 -13 6 682 846 181 21 0 chrX 12733962 12734106 -153916190 - B1_Mur4 SINE Alu -3 147 1 6 682 748 223 126 11 chrX 12734106 12734295 -153916001 - B3 SINE B2 -2 214 3 6 682 497 193 64 0 chrX 12734353 12734462 -153915834 - PB1D9 SINE Alu 0 120 5 6 682 441 272 23 85 chrX 12735144 12735241 -153915055 + B4 SINE B4 2 87 -205 6 682 620 139 3 19 chrX 12735241 12735359 -153914937 + B1_Mus1 SINE Alu 2 120 0 6 682 213 39 0 0 chrX 12735392 12735418 -153914878 + (CGTG)n Simple_repeat Simple_repeat 4 29 0 6 682 300 53 0 0 chrX 12735418 12735455 -153914841 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 682 464 225 187 11 chrX 12735520 12735650 -153914646 - B1_Mus1 SINE Alu -5 143 1 6 682 1144 58 0 0 chrX 12736232 12736369 -153913927 + B1_Mus1 SINE Alu 2 138 -10 6 682 256 299 26 13 chrX 12736393 12736471 -153913825 - ID4_ SINE ID -3 80 2 6 682 268 222 93 0 chrX 12737706 12737760 -153912536 + B1_Mus2 SINE Alu 11 69 -78 6 682 201 108 0 0 chrX 12739027 12739064 -153911232 + (T)n Simple_repeat Simple_repeat 1 37 0 6 682 555 217 38 0 chrX 12739282 12739388 -153910908 + PB1D9 SINE Alu 1 110 -10 6 682 333 311 37 15 chrX 12739543 12739677 -153910619 + MER82 DNA MER2_type 168 304 -349 6 682 410 238 56 28 chrX 12739701 12739809 -153910487 + MER82 DNA MER2_type 419 529 -124 6 682 609 169 45 68 chrX 12739856 12739989 -153910307 - B1_Mur4 SINE Alu -1 149 20 6 682 1122 81 0 26 chrX 12740349 12740501 -153909795 + B1_Mus1 SINE Alu 1 148 0 6 682 409 287 10 41 chrX 12740542 12740640 -153909656 + PB1D9 SINE Alu 6 100 -20 6 682 237 33 0 0 chrX 12740640 12740670 -153909626 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 6 682 418 290 0 0 chrX 12741371 12741478 -153908818 + PB1D10 SINE Alu 3 109 -8 6 682 220 300 250 13 chrX 12741638 12741790 -153908506 + MIR SINE MIR 69 256 -6 7 682 282 343 35 21 chrX 12742165 12742308 -153907988 + B1F1 SINE Alu 5 149 0 7 682 189 0 0 0 chrX 12742750 12742771 -153907525 + (ATG)n Simple_repeat Simple_repeat 3 23 0 7 682 777 220 73 34 chrX 12742848 12743027 -153907269 - B3 SINE B2 -4 212 27 7 682 1103 242 125 45 chrX 12743121 12743368 -153906928 - Lx9 LINE L1 -153 7491 7200 7 682 1447 60 38 0 chrX 12743368 12743553 -153906743 - B2_Mm2 SINE B2 -1 194 3 7 682 1103 242 125 45 chrX 12743553 12743681 -153906615 - Lx9 LINE L1 -445 7199 7086 7 682 962 156 101 14 chrX 12743887 12744095 -153906201 - URR1A DNA MER1_type 0 226 1 7 682 1186 55 0 7 chrX 12744263 12744411 -153905885 - B1_Mus2 SINE Alu 0 147 1 7 682 1109 93 75 6 chrX 12744473 12744646 -153905650 + B2_Mm1a SINE B2 1 185 -8 7 682 285 270 12 86 chrX 12744877 12744958 -153905338 + MT2B LTR ERVL 159 233 -368 7 682 382 217 43 0 chrX 12744902 12744971 -153905325 + B1_Mm SINE Alu 21 92 -55 7 682 605 140 219 0 chrX 12744984 12745098 -153905198 + B1_Mus1 SINE Alu 5 143 -5 7 682 726 156 21 36 chrX 12745372 12745512 -153904784 - B1_Mm SINE Alu -7 140 3 7 682 942 77 84 8 chrX 12745826 12745957 -153904339 - B1_Mus2 SINE Alu -6 141 1 7 682 417 296 25 50 chrX 12746008 12746129 -153904167 + RSINE1 SINE B4 3 120 -45 7 682 452 280 54 25 chrX 12746260 12746431 -153903865 - B3A SINE B2 -10 185 4 7 682 268 243 81 0 chrX 12748592 12748666 -153901630 - ID4 SINE ID -1 82 3 7 682 438 224 128 18 chrX 12750837 12750946 -153899350 - B1F SINE Alu -6 143 23 7 682 762 190 42 7 chrX 12751370 12751513 -153898783 - B1_Mur4 SINE Alu -2 148 1 7 682 344 159 27 55 chrX 12751545 12751618 -153898678 - ID4 SINE ID -10 73 3 7 682 977 85 7 72 chrX 12751666 12751818 -153898478 - B1_Mus1 SINE Alu -5 143 2 7 682 1484 59 0 5 chrX 12751823 12752010 -153898286 - B2_Mm1a SINE B2 -7 186 1 7 682 524 304 68 27 chrX 12752340 12752532 -153897764 + B4 SINE B4 4 222 0 7 682 555 261 59 7 chrX 12752532 12752667 -153897629 + B1_Mur2 SINE Alu 7 148 -1 7 682 515 283 12 73 chrX 12752693 12752857 -153897439 - RSINE1 SINE B4 -3 162 9 7 682 1249 96 34 0 chrX 12752940 12753118 -153897178 + B2_Mm1t SINE B2 2 185 -8 7 682 396 206 42 32 chrX 12753225 12753320 -153896976 + B3A SINE B2 1 96 -102 7 682 617 130 11 0 chrX 12753397 12753489 -153896807 - B1_Mus2 SINE Alu -1 146 54 7 682 352 82 131 0 chrX 12753502 12753563 -153896733 - B2_Mm1a SINE B2 0 193 125 7 682 180 0 0 0 chrX 12753578 12753598 -153896698 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 7 682 1233 97 45 6 chrX 12753598 12753774 -153896522 - B2_Mm2 SINE B2 -12 183 1 7 682 328 224 0 17 chrX 12754077 12754136 -153896160 + B3 SINE B2 138 195 -21 7 682 503 242 31 31 chrX 12754156 12754284 -153896012 + RSINE1 SINE B4 4 131 -34 7 682 1112 68 13 7 chrX 12754358 12754507 -153895789 - B1_Mur4 SINE Alu 0 150 1 7 682 1109 93 75 6 chrX 12754569 12754742 -153895554 + B2_Mm1a SINE B2 1 185 -8 7 682 285 270 12 86 chrX 12754973 12755054 -153895242 + MT2B LTR ERVL 159 233 -368 7 682 382 217 43 0 chrX 12754998 12755067 -153895229 + B1_Mm SINE Alu 21 92 -55 7 682 605 140 219 0 chrX 12755080 12755194 -153895102 + B1_Mus1 SINE Alu 5 143 -5 7 682 216 171 0 0 chrX 12755431 12755466 -153894830 + CT-rich Low_complexity Low_complexity 4 38 0 7 682 726 156 21 36 chrX 12755468 12755608 -153894688 - B1_Mm SINE Alu -7 140 3 7 682 942 77 84 8 chrX 12755922 12756053 -153894243 - B1_Mus2 SINE Alu -6 141 1 7 682 417 296 25 50 chrX 12756104 12756225 -153894071 + RSINE1 SINE B4 3 120 -45 7 682 452 280 54 25 chrX 12756356 12756527 -153893769 - B3A SINE B2 -10 185 4 7 682 268 243 81 0 chrX 12758688 12758762 -153891534 - ID4 SINE ID -1 82 3 7 682 438 224 128 18 chrX 12760932 12761041 -153889255 - B1F SINE Alu -6 143 23 7 682 762 190 42 7 chrX 12761465 12761608 -153888688 - B1_Mur4 SINE Alu -2 148 1 7 682 344 159 27 55 chrX 12761640 12761713 -153888583 - ID4 SINE ID -10 73 3 7 682 977 85 7 72 chrX 12761761 12761913 -153888383 - B1_Mus1 SINE Alu -5 143 2 7 682 1484 59 0 5 chrX 12761918 12762105 -153888191 - B2_Mm1a SINE B2 -7 186 1 7 682 524 299 68 27 chrX 12762435 12762627 -153887669 + B4 SINE B4 4 222 0 7 682 603 246 59 7 chrX 12762627 12762762 -153887534 + B1_Mur2 SINE Alu 7 148 -1 7 682 515 283 12 73 chrX 12762788 12762952 -153887344 - RSINE1 SINE B4 -3 162 9 7 682 1249 96 34 0 chrX 12763035 12763213 -153887083 + B2_Mm1t SINE B2 2 185 -8 7 682 396 206 42 32 chrX 12763320 12763415 -153886881 + B3A SINE B2 1 96 -102 7 682 617 130 11 0 chrX 12763492 12763584 -153886712 - B1_Mus2 SINE Alu -1 146 54 7 682 352 82 131 0 chrX 12763597 12763658 -153886638 - B2_Mm1a SINE B2 0 193 125 7 682 180 0 0 0 chrX 12763673 12763693 -153886603 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 7 682 1233 97 45 6 chrX 12763693 12763869 -153886427 - B2_Mm2 SINE B2 -12 183 1 7 682 328 224 0 17 chrX 12764172 12764231 -153886065 + B3 SINE B2 138 195 -21 7 682 503 242 31 31 chrX 12764251 12764379 -153885917 + RSINE1 SINE B4 4 131 -34 7 682 1112 68 13 7 chrX 12764453 12764602 -153885694 - B1_Mur4 SINE Alu 0 150 1 7 682 1109 93 75 6 chrX 12764664 12764837 -153885459 + B2_Mm1a SINE B2 1 185 -8 7 682 285 270 12 86 chrX 12765068 12765149 -153885147 + MT2B LTR ERVL 159 233 -368 7 682 382 217 43 0 chrX 12765093 12765162 -153885134 + B1_Mm SINE Alu 21 92 -55 7 682 605 140 219 0 chrX 12765175 12765289 -153885007 + B1_Mus1 SINE Alu 5 143 -5 7 682 216 171 0 0 chrX 12765526 12765561 -153884735 + CT-rich Low_complexity Low_complexity 4 38 0 7 682 726 156 21 36 chrX 12765563 12765703 -153884593 - B1_Mm SINE Alu -7 140 3 7 682 942 77 84 8 chrX 12766017 12766148 -153884148 - B1_Mus2 SINE Alu -6 141 1 7 682 417 296 25 50 chrX 12766199 12766320 -153883976 + RSINE1 SINE B4 3 120 -45 7 682 452 280 54 25 chrX 12766451 12766622 -153883674 - B3A SINE B2 -10 185 4 7 682 268 243 81 0 chrX 12768783 12768857 -153881439 - ID4 SINE ID -1 82 3 7 682 438 224 128 18 chrX 12771028 12771137 -153879159 - B1F SINE Alu -6 143 23 7 682 762 190 42 7 chrX 12771561 12771704 -153878592 - B1_Mur4 SINE Alu -2 148 1 7 682 344 159 27 55 chrX 12771736 12771809 -153878487 - ID4 SINE ID -10 73 3 7 682 977 85 7 72 chrX 12771857 12772009 -153878287 - B1_Mus1 SINE Alu -5 143 2 7 682 1484 59 0 5 chrX 12772014 12772201 -153878095 - B2_Mm1a SINE B2 -7 186 1 7 682 524 304 68 27 chrX 12772531 12772723 -153877573 + B4 SINE B4 4 222 0 7 682 555 261 59 7 chrX 12772723 12772858 -153877438 + B1_Mur2 SINE Alu 7 148 -1 7 682 515 283 12 73 chrX 12772884 12773048 -153877248 - RSINE1 SINE B4 -3 162 9 7 682 1231 101 34 0 chrX 12773131 12773309 -153876987 + B2_Mm1t SINE B2 2 185 -8 7 682 396 206 42 32 chrX 12773416 12773511 -153876785 + B3A SINE B2 1 96 -102 7 682 617 130 11 0 chrX 12773588 12773680 -153876616 - B1_Mus2 SINE Alu -1 146 54 7 682 352 82 131 0 chrX 12773693 12773754 -153876542 - B2_Mm1a SINE B2 0 193 125 7 682 180 0 0 0 chrX 12773769 12773789 -153876507 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 7 682 1233 97 45 6 chrX 12773789 12773965 -153876331 - B2_Mm2 SINE B2 -12 183 1 7 682 328 224 0 17 chrX 12774268 12774327 -153875969 + B3 SINE B2 138 195 -21 7 682 503 242 31 31 chrX 12774347 12774475 -153875821 + RSINE1 SINE B4 4 131 -34 7 682 1141 75 0 7 chrX 12774549 12774697 -153875599 - B1_Mus1 SINE Alu 0 148 2 7 682 265 261 77 0 chrX 12774710 12774775 -153875521 + B4A SINE B4 106 175 -117 7 682 807 120 8 0 chrX 12775163 12775280 -153875016 - B1_Mus1 SINE Alu -21 127 10 7 682 451 244 44 30 chrX 12775165 12775300 -153874996 - ID_B1 SINE B4 -21 203 67 7 682 241 253 13 39 chrX 12775335 12775413 -153874883 - ID_B1 SINE B4 -54 170 95 7 682 4896 101 54 17 chrX 12775565 12776320 -153873976 + Lx LINE L1 5870 6652 -2 7 682 321 221 277 35 chrX 12776325 12776435 -153873861 + B3 SINE B2 6 146 -70 7 682 372 94 0 0 chrX 12776435 12776488 -153873808 + (CA)n Simple_repeat Simple_repeat 1 53 0 7 682 321 221 277 35 chrX 12776488 12776518 -153873778 + B3 SINE B2 147 180 -36 7 682 2299 182 87 29 chrX 12776665 12777185 -153873111 + RLTR20B3 LTR ERVK 1 550 -27 7 682 242 299 52 52 chrX 12777479 12777634 -153872662 + RMER20B LTR ERVK 449 603 -24 7 682 238 292 46 0 chrX 12777640 12777705 -153872591 + ID4_ SINE ID 16 83 0 7 682 232 329 40 14 chrX 12777646 12777720 -153872576 + ID_B1 SINE B4 23 98 -126 7 682 903 79 40 0 chrX 12777824 12777950 -153872346 - B1_Mm SINE Alu 0 147 17 7 682 358 320 23 83 chrX 12777985 12778118 -153872178 - PB1D7 SINE Alu -23 126 2 7 682 879 159 0 14 chrX 12778128 12778268 -153872028 - B1_Mur1 SINE Alu 0 149 12 7 682 535 288 22 89 chrX 12778268 12778353 -153871943 - ID_B1 SINE B4 0 224 15 7 682 2152 123 59 64 chrX 12778354 12778662 -153871634 + RMER12 LTR ERVK 1 320 -1002 8 682 1232 35 7 0 chrX 12778662 12778807 -153871489 - B1_Mm SINE Alu 0 147 2 8 682 2152 123 59 64 chrX 12778807 12778888 -153871408 + RMER12 LTR ERVK 321 388 -934 8 682 266 86 0 0 chrX 12778905 12778940 -153871356 - B1_Mus2 SINE Alu -112 35 1 8 682 928 50 0 32 chrX 12778967 12779075 -153871221 + B1_Mus1 SINE Alu 28 135 -13 8 682 252 0 0 0 chrX 12779075 12779103 -153871193 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 8 682 928 50 0 32 chrX 12779103 12779119 -153871177 + B1_Mus1 SINE Alu 136 148 0 8 682 34 42 0 0 chrX 12779162 12779210 -153871086 + AT_rich Low_complexity Low_complexity 1 48 0 8 682 1334 42 36 0 chrX 12779218 12779384 -153870912 + B2_Mm2 SINE B2 2 173 -22 8 682 313 259 83 9 chrX 12779425 12779534 -153870762 - B3A SINE B2 -80 118 2 8 682 279 0 0 0 chrX 12780963 12780994 -153869302 + (A)n Simple_repeat Simple_repeat 1 31 0 8 682 1215 55 0 0 chrX 12781517 12781662 -153868634 + B1_Mus2 SINE Alu 1 145 -2 8 682 221 0 35 0 chrX 12781666 12781695 -153868601 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 8 682 426 39 0 0 chrX 12781989 12782041 -153868255 + (TTTC)n Simple_repeat Simple_repeat 2 53 0 8 682 21 0 0 0 chrX 12782150 12782171 -153868125 + AT_rich Low_complexity Low_complexity 1 21 0 8 682 614 200 89 27 chrX 12782194 12782381 -153867915 + B3 SINE B2 3 188 -7 8 682 641 24 0 35 chrX 12782387 12782472 -153867824 + B2_Mm1a SINE B2 104 185 -8 8 682 251 305 0 35 chrX 12782527 12782612 -153867684 + ID2 SINE ID 2 83 0 8 682 260 299 93 9 chrX 12782686 12782794 -153867502 + PB1 SINE Alu 11 127 0 8 682 282 29 0 0 chrX 12783212 12783247 -153867049 + (CA)n Simple_repeat Simple_repeat 1 35 0 8 682 254 190 0 17 chrX 12783248 12783307 -153866989 + GA-rich Low_complexity Low_complexity 1 58 0 8 682 383 236 63 45 chrX 12783307 12783418 -153866878 + PB1D10 SINE Alu 5 117 0 8 682 452 116 0 10 chrX 12783461 12783557 -153866739 + (TAAA)n Simple_repeat Simple_repeat 3 97 0 8 682 465 259 215 61 chrX 12783612 12783924 -153866372 - RLTR9A LTR ERVK -8 360 1 8 682 802 221 64 35 chrX 12784010 12784212 -153866084 - B3 SINE B2 0 216 9 8 682 183 167 0 0 chrX 12784332 12784374 -153865922 + A-rich Low_complexity Low_complexity 6 47 0 8 682 331 307 28 10 chrX 12785676 12785783 -153864513 + B1_Mur4 SINE Alu 2 109 -40 8 682 358 290 274 0 chrX 12785787 12785973 -153864323 + Arthur1 DNA Tip100 166 402 -3545 8 682 334 282 0 0 chrX 12786008 12786086 -153864210 + Arthur1 DNA Tip100 498 575 -3372 8 682 851 226 30 10 chrX 12786090 12786287 -153864009 + B3 SINE B2 1 201 -15 8 682 364 188 29 0 chrX 12786336 12786405 -153863891 - RLTR24 LTR ERV1 0 529 459 8 682 715 165 0 24 chrX 12786440 12786564 -153863732 - B1_Mus2 SINE Alu -17 130 10 8 682 1993 152 13 73 chrX 12786599 12786777 -153863519 - RLTR24 LTR ERV1 -89 440 267 8 682 1414 34 85 6 chrX 12786777 12786937 -153863359 + B2_Mm1a SINE B2 2 160 -33 8 682 387 0 0 0 chrX 12786937 12786980 -153863316 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 8 682 1414 34 85 6 chrX 12786980 12786996 -153863300 + B2_Mm1a SINE B2 161 190 -3 8 682 1993 152 13 73 chrX 12786996 12787214 -153863082 - RLTR24 LTR ERV1 -263 266 68 8 682 600 236 222 6 chrX 12787237 12787399 -153862897 + B3 SINE B2 15 211 -5 8 682 182 203 78 78 chrX 12787465 12787529 -153862767 - L3 LINE CR1 -1914 2575 2512 8 682 984 247 79 73 chrX 12787534 12787888 -153862408 + RMER15 LTR ERVL 220 575 0 8 682 945 111 0 0 chrX 12788105 12788240 -153862056 + B1_Mus2 SINE Alu 13 147 0 8 682 517 287 9 0 chrX 12788271 12788386 -153861910 - RSINE1 SINE B4 -45 120 5 8 682 390 244 35 0 chrX 12788390 12788476 -153861820 - PB1D10 SINE Alu -1 116 28 8 682 459 0 0 0 chrX 12788476 12788527 -153861769 + (CA)n Simple_repeat Simple_repeat 1 51 0 8 682 5014 58 7 0 chrX 12788880 12789496 -153860800 + L1_Mus1 LINE L1 5946 6565 -2 8 682 536 0 16 0 chrX 12789547 12789611 -153860685 + (TG)n Simple_repeat Simple_repeat 2 66 0 8 682 403 198 135 0 chrX 12789611 12789707 -153860589 - PB1D9 SINE Alu -10 110 2 8 682 217 267 0 0 chrX 12789986 12790046 -153860250 + B2_Mm2 SINE B2 1 60 -135 8 682 3809 123 16 10 chrX 12790046 12790623 -153859673 + RLTR1D LTR ERV1 26 605 0 8 682 462 137 147 36 chrX 12790631 12790755 -153859541 + B1_Mur1 SINE Alu 29 149 -1 8 682 287 277 13 0 chrX 12790744 12790844 -153859452 + B1_Mur2 SINE Alu 49 149 0 8 682 309 132 24 24 chrX 12790844 12790929 -153859367 + A-rich Low_complexity Low_complexity 1 85 0 8 682 430 240 80 23 chrX 12791137 12791269 -153859027 + ID_B1 SINE B4 17 157 -67 8 682 883 288 42 17 chrX 12791269 12791491 -153858805 + B4A SINE B4 1 230 -62 8 682 1001 222 15 5 chrX 12791491 12791695 -153858601 + B3 SINE B2 2 207 -9 8 682 883 288 42 17 chrX 12791695 12791709 -153858587 + B4A SINE B4 231 243 -49 8 682 436 252 102 24 chrX 12791712 12791889 -153858407 + L1MEc LINE L1 2135 2292 -4108 8 682 1249 21 0 0 chrX 12791900 12792042 -153858254 + B1_Mus1 SINE Alu 1 142 -6 8 682 594 51 0 0 chrX 12792044 12792122 -153858174 + (GAAAA)n Simple_repeat Simple_repeat 2 79 0 8 682 232 250 0 73 chrX 12792134 12792216 -153858080 + B4A SINE B4 217 292 0 8 682 279 54 0 0 chrX 12792231 12792268 -153858028 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 682 396 139 125 0 chrX 12792275 12792347 -153857949 + ID_B1 SINE B4 143 223 -1 8 682 1958 172 33 14 chrX 12792454 12792813 -153857483 + ORR1D1 LTR MaLR 1 366 -8 8 682 686 67 0 11 chrX 12792844 12792934 -153857362 - 5S rRNA rRNA -31 90 2 8 682 672 78 0 89 chrX 12792928 12793040 -153857256 + B1_Mus2 SINE Alu 46 147 0 8 682 335 206 0 105 chrX 12793214 12793290 -153857006 + RSINE1 SINE B4 83 150 -15 8 682 324 102 0 0 chrX 12793291 12793340 -153856956 + (CA)n Simple_repeat Simple_repeat 1 49 0 8 682 1341 57 17 6 chrX 12793691 12793866 -153856430 + B2_Mm1t SINE B2 2 178 -15 8 682 402 21 0 0 chrX 12793866 12793913 -153856383 + (GAAAA)n Simple_repeat Simple_repeat 1 47 0 8 682 588 279 91 4 chrX 12794061 12794302 -153855994 - L1MC1 LINE L1 -13 6320 6059 8 682 1443 70 16 0 chrX 12794317 12794503 -153855793 + B2_Mm2 SINE B2 2 190 -5 8 682 560 269 59 34 chrX 12794546 12794716 -153855580 - ID_B1 SINE B4 -39 253 80 8 682 342 123 0 0 chrX 12794725 12794782 -153855514 + (TTTC)n Simple_repeat Simple_repeat 2 58 0 8 682 1119 68 7 0 chrX 12794792 12794938 -153855358 - B1_Mus2 SINE Alu 0 147 1 8 682 331 280 140 0 chrX 12794944 12795051 -153855245 - L1MC1 LINE L1 -386 5958 5837 8 682 180 77 0 0 chrX 12795142 12795168 -153855128 + (TTTG)n Simple_repeat Simple_repeat 4 29 0 8 682 896 135 7 34 chrX 12795169 12795315 -153854981 - B1_Mur3 SINE Alu -7 142 1 8 682 329 324 28 9 chrX 12796287 12796396 -153853900 - MER2 DNA MER2_type -9 336 226 8 682 229 296 0 0 chrX 12796573 12796627 -153853669 - MER2 DNA MER2_type -81 264 211 8 682 408 242 10 31 chrX 12796626 12796640 -153853656 - ID_B1 SINE B4 -26 198 103 8 682 403 245 29 58 chrX 12796640 12796724 -153853572 - B1F2 SINE Alu -41 108 26 8 682 1835 139 95 44 chrX 12796724 12797114 -153853182 - RMER17C LTR ERVK 0 410 1 8 682 403 245 29 58 chrX 12797114 12797133 -153853163 - B1F2 SINE Alu -124 25 8 8 682 277 200 0 62 chrX 12797139 12797203 -153853093 - MER2 DNA MER2_type -120 225 166 8 682 332 261 43 21 chrX 12797233 12797327 -153852969 - B1F1 SINE Alu -41 108 13 8 682 374 264 11 21 chrX 12797247 12797340 -153852956 - ID_B1 SINE B4 -53 171 80 8 682 809 144 15 15 chrX 12797370 12797504 -153852792 - B1_Mur3 SINE Alu -7 142 9 8 682 1016 102 7 0 chrX 12797558 12797695 -153852601 - B1_Mur3 SINE Alu -11 138 1 8 682 216 275 71 48 chrX 12797778 12797862 -153852434 - MIR SINE MIR -24 238 153 8 682 339 333 20 88 chrX 12797984 12798132 -153852164 - B4A SINE B4 -132 160 23 8 682 2323 106 35 6 chrX 12798186 12798529 -153851767 - MT2C_Mm LTR ERVL -117 358 6 8 682 335 48 31 31 chrX 12798531 12798595 -153851701 + (TC)n Simple_repeat Simple_repeat 1 64 0 8 682 716 191 36 14 chrX 12798595 12798733 -153851563 - B1_Mus2 SINE Alu -1 146 6 8 682 255 141 43 21 chrX 12798733 12798827 -153851469 + CT-rich Low_complexity Low_complexity 1 96 0 8 682 728 179 37 15 chrX 12798860 12798996 -153851300 - B1_Mus2 SINE Alu 0 147 9 8 682 616 107 69 12 chrX 12798996 12799731 -153850565 + CT-rich Low_complexity Low_complexity 1 776 0 8 682 650 165 68 38 chrX 12799732 12799864 -153850432 - B1_Mus2 SINE Alu -6 141 6 8 682 581 117 57 18 chrX 12799864 12800195 -153850101 + CT-rich Low_complexity Low_complexity 1 344 0 8 682 753 169 36 14 chrX 12800226 12800364 -153849932 - B1_Mus2 SINE Alu -1 146 6 8 682 409 139 27 18 chrX 12800378 12800488 -153849808 + CT-rich Low_complexity Low_complexity 1 111 0 8 682 560 114 59 18 chrX 12800510 12800680 -153849616 + CT-rich Low_complexity Low_complexity 1 177 0 8 682 284 116 62 10 chrX 12800705 12800801 -153849495 + CT-rich Low_complexity Low_complexity 1 101 0 8 682 446 132 62 19 chrX 12800823 12800985 -153849311 + CT-rich Low_complexity Low_complexity 1 169 0 8 682 606 195 57 0 chrX 12800986 12801109 -153849187 - B1_Mus2 SINE Alu -6 141 12 8 682 504 140 45 23 chrX 12801109 12801285 -153849011 + CT-rich Low_complexity Low_complexity 1 180 0 8 682 750 158 37 15 chrX 12801305 12801440 -153848856 - B1_Mus2 SINE Alu -1 146 9 8 682 1046 186 56 51 chrX 12801536 12801751 -153848545 + B3 SINE B2 1 216 0 8 682 374 250 122 77 chrX 12801771 12801927 -153848369 - RSINE1 SINE B4 -1 164 2 8 682 195 42 0 0 chrX 12801988 12802012 -153848284 + (TA)n Simple_repeat Simple_repeat 1 24 0 8 682 274 214 0 0 chrX 12802014 12802056 -153848240 - ID_B1 SINE B4 -25 199 158 8 682 220 296 11 90 chrX 12802056 12802103 -153848193 - B1F1 SINE Alu -57 92 11 8 682 589 180 67 118 chrX 12802116 12802311 -153847985 - B2_Mm2 SINE B2 -10 185 1 8 682 731 163 0 24 chrX 12802372 12802498 -153847798 - B1_Mus2 SINE Alu -10 137 15 8 682 1291 27 0 0 chrX 12802499 12802645 -153847651 + B1_Mm SINE Alu 2 147 0 8 682 387 0 0 0 chrX 12802731 12802774 -153847522 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 682 452 243 0 101 chrX 12802786 12802905 -153847391 - B3A SINE B2 -89 109 3 9 682 192 40 0 0 chrX 12802925 12802950 -153847346 + (TG)n Simple_repeat Simple_repeat 2 26 0 9 682 543 193 16 58 chrX 12802999 12803120 -153847176 - B1_Mur2 SINE Alu 0 149 34 9 682 281 177 16 16 chrX 12803135 12803198 -153847098 + 4.5SRNA scRNA scRNA 26 88 -6 9 682 649 153 9 0 chrX 12803142 12803253 -153847043 + B1_Mus1 SINE Alu 37 148 0 9 682 823 244 56 44 chrX 12803269 12803539 -153846757 + RLTR40 LTR ERVK 153 425 -392 9 682 390 167 26 0 chrX 12803578 12803656 -153846640 - PB1D9 SINE Alu -6 114 35 9 682 436 173 43 103 chrX 12803686 12803802 -153846494 + B1_Mm SINE Alu 36 144 -3 9 682 907 185 123 70 chrX 12803783 12804004 -153846292 + RLTR40 LTR ERVK 480 720 -97 9 682 1408 81 11 0 chrX 12804004 12804190 -153846106 + B2_Mm1t SINE B2 2 189 -4 9 682 907 185 123 70 chrX 12804190 12804253 -153846043 + RLTR40 LTR ERVK 721 779 -38 9 682 226 302 38 0 chrX 12804319 12804372 -153845924 + MER68 LTR ERVL 72 126 -437 9 682 519 293 163 19 chrX 12804392 12804601 -153845695 + MER68 LTR ERVL 184 422 -141 9 682 428 232 0 0 chrX 12804653 12804735 -153845561 + ID4 SINE ID 2 83 0 9 682 322 283 10 42 chrX 12804944 12804972 -153845324 - ID_B1 SINE B4 -59 165 101 9 682 373 172 0 0 chrX 12804972 12805030 -153845266 - PB1D9 SINE Alu -62 58 1 9 682 1491 78 5 0 chrX 12805135 12805327 -153844969 - B2_Mm1a SINE B2 0 193 1 9 682 474 203 16 71 chrX 12805385 12805512 -153844784 + PB1D7 SINE Alu 1 120 0 9 682 925 64 0 23 chrX 12805522 12805650 -153844646 + B1_Mus2 SINE Alu 23 147 0 9 682 214 143 0 31 chrX 12805650 12805715 -153844581 + A-rich Low_complexity Low_complexity 1 63 0 9 682 228 296 28 90 chrX 12805715 12805860 -153844436 + Cheshire DNA MER1_type 421 556 -1864 9 682 367 304 9 64 chrX 12805757 12805776 -153844520 - ID_B1 SINE B4 -116 108 6 9 682 556 167 0 0 chrX 12805776 12805866 -153844430 - BC1_Mm scRNA scRNA -57 95 6 9 682 306 158 0 50 chrX 12805864 12805924 -153844372 - RLTR40 LTR ERVK -648 169 113 9 682 1131 99 7 0 chrX 12805956 12806107 -153844189 - B2_Mm1t SINE B2 -34 159 8 9 682 270 253 52 62 chrX 12806116 12806141 -153844155 - RLTR40 LTR ERVK -703 114 93 9 682 375 41 0 0 chrX 12806141 12806190 -153844106 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 9 682 1167 44 0 0 chrX 12806191 12806327 -153843969 - B1_Mus2 SINE Alu -11 136 1 9 682 270 253 52 62 chrX 12806327 12806396 -153843900 - RLTR40 LTR ERVK -725 92 19 9 682 2275 133 79 8 chrX 12806407 12806771 -153843525 - MTB_Mm LTR MaLR 0 407 23 9 682 387 0 0 0 chrX 12806771 12806814 -153843482 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 682 2275 133 79 8 chrX 12806814 12806829 -153843467 - MTB_Mm LTR MaLR -385 22 3 9 682 186 43 0 0 chrX 12807131 12807154 -153843142 + (TG)n Simple_repeat Simple_repeat 1 23 0 9 682 735 207 43 0 chrX 12807258 12807398 -153842898 - B1F SINE Alu -1 148 3 9 682 345 269 51 0 chrX 12807541 12807619 -153842677 + ID4 SINE ID 2 83 0 9 682 293 308 65 28 chrX 12808231 12808338 -153841958 + MER2 DNA MER2_type 11 121 -224 9 682 265 318 36 9 chrX 12808461 12808572 -153841724 - PB1D10 SINE Alu -3 114 1 9 682 239 263 18 0 chrX 12808690 12808747 -153841549 + ID4_ SINE ID 26 83 0 9 682 232 197 239 15 chrX 12808760 12808827 -153841469 + ID2 SINE ID 2 83 0 9 682 527 225 44 52 chrX 12808884 12809020 -153841276 + ID_B1 SINE B4 86 220 -4 9 682 447 252 231 33 chrX 12809306 12809385 -153840911 - B4A SINE B4 -2 290 177 9 682 1633 37 5 0 chrX 12809385 12809576 -153840720 - B2_Mm1t SINE B2 0 193 2 9 682 447 252 231 33 chrX 12809576 12809738 -153840558 - B4A SINE B4 -116 176 1 9 682 1224 99 6 6 chrX 12809962 12810135 -153840161 - B2_Mm1t SINE B2 -20 173 1 9 682 910 146 42 0 chrX 12810137 12810281 -153840015 - B1_Mur4 SINE Alu 0 150 1 9 682 559 219 41 16 chrX 12810420 12810541 -153839755 + B1_Mur1 SINE Alu 8 131 -18 9 682 472 294 25 97 chrX 12810667 12810904 -153839392 - RLTR42-int LTR ERVK -4134 1388 1169 9 682 359 247 151 0 chrX 12810950 12811043 -153839253 + B1_Mur2 SINE Alu 6 112 -37 9 682 220 111 0 43 chrX 12811067 12811114 -153839182 + GA-rich Low_complexity Low_complexity 3 47 0 9 682 405 193 487 6 chrX 12811116 12811327 -153838969 - ORR1D1 LTR MaLR -55 315 1 9 682 242 290 0 0 chrX 12811505 12811567 -153838729 + tRNA-Gly-GGY tRNA tRNA 3 64 -10 9 682 377 152 17 0 chrX 12811514 12811573 -153838723 + ID4 SINE ID 18 77 -6 9 682 22 0 0 0 chrX 12811769 12811791 -153838505 + AT_rich Low_complexity Low_complexity 1 22 0 9 682 748 253 20 64 chrX 12812177 12812380 -153837916 + B3A SINE B2 1 194 -4 9 682 488 260 19 124 chrX 12812389 12812473 -153837823 + ID_B1 SINE B4 27 162 -130 9 682 436 268 0 0 chrX 12812473 12812570 -153837726 + B1F1 SINE Alu 12 108 -41 9 682 488 260 19 124 chrX 12812570 12812617 -153837679 + ID_B1 SINE B4 163 242 -50 9 682 574 263 91 24 chrX 12812678 12812888 -153837408 + ID_B1 SINE B4 1 224 0 9 682 478 99 197 117 chrX 12812917 12813054 -153837242 + B1_Mur3 SINE Alu 1 148 -1 9 682 285 120 21 42 chrX 12813055 12813151 -153837145 + A-rich Low_complexity Low_complexity 3 96 0 9 682 233 303 0 0 chrX 12814242 12814308 -153835988 - ID4_ SINE ID -16 67 2 9 682 777 22 0 0 chrX 12814317 12814408 -153835888 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 9 682 1256 41 0 0 chrX 12814410 12814557 -153835739 - B1_Mus1 SINE Alu -1 147 1 9 682 376 171 12 62 chrX 12814659 12814740 -153835556 - ID4 SINE ID -6 77 1 9 682 673 265 114 5 chrX 12814860 12815061 -153835235 - ID_B1 SINE B4 0 224 2 9 682 577 132 244 9 chrX 12815086 12815110 -153835186 - B1_Mus2 SINE Alu -1 146 118 9 682 315 0 0 0 chrX 12815110 12815145 -153835151 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 682 577 132 244 9 chrX 12815145 12815235 -153835061 - B1_Mus2 SINE Alu -30 117 5 9 682 291 245 318 15 chrX 12815236 12815440 -153834856 + L1MB2 LINE L1 5799 6065 -106 9 682 21 0 0 0 chrX 12817183 12817204 -153833092 + AT_rich Low_complexity Low_complexity 1 21 0 9 682 891 148 0 22 chrX 12817254 12817392 -153832904 + B1_Mur3 SINE Alu 2 136 -13 9 682 495 0 0 0 chrX 12817434 12817489 -153832807 + (CA)n Simple_repeat Simple_repeat 2 56 0 9 682 253 203 61 98 chrX 12817501 12817583 -153832713 + ID4_ SINE ID 5 83 0 9 682 2179 166 178 0 chrX 12817605 12817939 -153832357 - RLTR11A2 LTR ERVK 0 527 125 9 682 270 0 0 0 chrX 12817939 12817969 -153832327 + (TGG)n Simple_repeat Simple_repeat 1 30 0 9 682 2179 166 178 0 chrX 12817969 12818079 -153832217 - RLTR11A2 LTR ERVK -403 124 6 9 682 1032 198 43 24 chrX 12818418 12818625 -153831671 - URR1B DNA MER1_type -13 212 2 9 682 24 0 0 0 chrX 12819412 12819436 -153830860 + AT_rich Low_complexity Low_complexity 1 24 0 9 682 473 240 18 46 chrX 12819454 12819563 -153830733 + PB1D10 SINE Alu 1 106 -11 9 682 284 240 55 83 chrX 12819890 12819999 -153830297 + LTR16E2 LTR ERVL 265 370 -86 9 682 324 200 143 0 chrX 12820631 12820701 -153829595 + PB1D10 SINE Alu 1 80 -37 9 682 577 235 0 57 chrX 12820887 12821009 -153829287 + RSINE1 SINE B4 3 117 -48 9 682 351 0 0 0 chrX 12821023 12821062 -153829234 + (TC)n Simple_repeat Simple_repeat 1 39 0 9 682 327 78 0 0 chrX 12821062 12821112 -153829184 + (CA)n Simple_repeat Simple_repeat 1 51 0 9 682 231 133 0 0 chrX 12821132 12821177 -153829119 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 9 682 342 45 0 0 chrX 12821204 12821248 -153829048 + (TC)n Simple_repeat Simple_repeat 1 44 0 9 682 868 311 11 171 chrX 12821323 12821452 -153828844 + MLT2B4 LTR ERVL 10 131 -389 9 682 1046 108 0 0 chrX 12821452 12821591 -153828705 + B1_Mus1 SINE Alu 2 140 -8 9 682 1117 260 69 129 chrX 12821591 12822059 -153828237 + MLT2B4 LTR ERVL 127 550 -6 9 682 432 319 117 21 chrX 12822577 12822817 -153827479 - LTR78 LTR ERV1 -679 625 363 9 682 431 298 14 34 chrX 12823171 12823317 -153826979 + LTR16E2 LTR ERVL 408 550 -18 9 682 810 250 71 39 chrX 12823614 12823897 -153826399 - B4A SINE B4 0 292 1 9 682 26 0 0 0 chrX 12823965 12823991 -153826305 + AT_rich Low_complexity Low_complexity 1 26 0 9 682 273 277 0 30 chrX 12824554 12824621 -153825675 - ID4 SINE ID -17 66 2 9 682 481 60 0 0 chrX 12825622 12825689 -153824607 - L1_Mus2 LINE L1 0 6566 6500 9 682 764 178 8 0 chrX 12825713 12825842 -153824454 - B1_Mur1 SINE Alu -8 141 12 9 682 240 275 15 30 chrX 12825856 12825886 -153824410 + ORR1B1-int LTR MaLR 622 649 -860 9 682 946 152 7 0 chrX 12825886 12826031 -153824265 + B1_Mus1 SINE Alu 3 148 0 9 682 207 176 0 0 chrX 12826031 12826065 -153824231 + GA-rich Low_complexity Low_complexity 3 36 0 9 682 8044 31 0 0 chrX 12826086 12827009 -153823287 - L1Md_T LINE L1 0 6582 5660 9 682 506 268 163 21 chrX 12827009 12827150 -153823146 + RSINE1 SINE B4 2 162 -3 9 682 540 0 0 0 chrX 12827165 12827225 -153823071 + (GAGAA)n Simple_repeat Simple_repeat 2 61 0 9 682 678 100 0 0 chrX 12827291 12827391 -153822905 + (GGAA)n Simple_repeat Simple_repeat 3 102 0 9 682 483 136 24 12 chrX 12827849 12827931 -153822365 - B1_Mur3 SINE Alu 0 149 67 9 682 234 301 10 41 chrX 12827931 12827945 -153822351 - ID_B1 SINE B4 -1 222 130 9 682 1111 56 35 0 chrX 12827966 12828108 -153822188 - B1_Mus1 SINE Alu 0 148 2 9 682 1059 71 0 0 chrX 12828126 12828267 -153822029 + (TTTC)n Simple_repeat Simple_repeat 3 143 0 9 682 1137 76 0 7 chrX 12828328 12828474 -153821822 - B1_Mus2 SINE Alu 0 147 3 9 682 1141 214 5 0 chrX 12828686 12828896 -153821400 + B3 SINE B2 2 212 -4 9 682 1726 21 0 0 chrX 12829175 12829367 -153820929 - B2_Mm1a SINE B2 0 193 2 9 682 236 284 48 24 chrX 12829518 12829601 -153820695 + B1F SINE Alu 1 85 -64 9 682 198 0 0 0 chrX 12829617 12829639 -153820657 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 9 682 1554 231 21 50 chrX 12829911 12830289 -153820007 + ORR1D2 LTR MaLR 4 370 0 1 682 324 227 43 138 chrX 12830418 12830461 -153819835 + MT2B LTR ERVL 131 160 -441 1 682 562 157 40 9 chrX 12830461 12830572 -153819724 + PB1D9 SINE Alu 4 125 -2 1 682 348 43 0 0 chrX 12830574 12830620 -153819676 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 1 682 450 91 61 0 chrX 12830692 12830758 -153819538 - ORR1D1 LTR MaLR 0 374 305 1 682 662 144 48 9 chrX 12830774 12830879 -153819417 + B1_Mus1 SINE Alu 33 141 -7 1 682 201 39 0 0 chrX 12830946 12830972 -153819324 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 682 1099 189 84 78 chrX 12830995 12831304 -153818992 - ORR1D1 LTR MaLR -63 311 1 1 682 369 228 27 31 chrX 12832251 12832371 -153817925 + PB1D10 SINE Alu 1 116 -1 1 682 384 315 45 0 chrX 12832384 12832495 -153817801 + PB1D10 SINE Alu 2 117 0 1 682 3730 181 23 53 chrX 12832748 12832801 -153817495 + Lx5 LINE L1 5905 5957 -1093 1 682 3343 74 31 38 chrX 12832801 12833278 -153817018 + MT2C_Mm LTR ERVL 1 474 -1 1 682 3792 180 23 52 chrX 12833278 12834016 -153816280 + Lx5 LINE L1 5958 6673 -377 1 682 596 140 14 27 chrX 12834092 12834239 -153816057 - RMER17B LTR ERVK -498 460 316 1 682 2994 49 7 47 chrX 12834274 12834680 -153815616 + RLTR10 LTR ERVK 1 390 0 1 682 8213 53 2 7 chrX 12834682 12835700 -153814596 + RLTR10-int LTR ERVK 10 998 -989 1 682 349 266 39 8 chrX 12835764 12835893 -153814403 + RLTR10-int LTR ERVK 1462 1594 -5987 1 682 8955 15 5 0 chrX 12835975 12836965 -153813331 + RLTR10-int LTR ERVK 990 1984 -3 1 682 2974 49 7 47 chrX 12836967 12837371 -153812925 + RLTR10 LTR ERVK 1 388 -2 1 682 667 140 132 0 chrX 12837377 12837491 -153812805 - B1_Mus1 SINE Alu -19 129 1 1 682 234 0 0 0 chrX 12837492 12837518 -153812778 + (ATTG)n Simple_repeat Simple_repeat 2 27 0 1 682 726 132 52 37 chrX 12837519 12837653 -153812643 - B1F2 SINE Alu -12 137 2 1 682 760 254 43 14 chrX 12837668 12837876 -153812420 - ID_B1 SINE B4 -8 216 3 1 682 977 195 176 47 chrX 12837902 12837960 -153812336 + ORR1D1 LTR MaLR 1 66 -308 1 682 865 200 0 7 chrX 12837960 12838111 -153812185 - B1_Mur4 SINE Alu 0 150 1 1 682 977 195 176 47 chrX 12838111 12838197 -153812099 + ORR1D1 LTR MaLR 67 187 -187 1 682 1110 112 0 0 chrX 12838197 12838366 -153811930 + (TCCC)n Simple_repeat Simple_repeat 4 172 0 1 682 977 195 176 47 chrX 12838366 12838516 -153811780 + ORR1D1 LTR MaLR 188 334 -40 1 682 443 103 38 25 chrX 12838500 12838580 -153811716 + B1_Mur4 SINE Alu 65 145 -5 1 682 327 98 78 0 chrX 12838616 12838667 -153811629 + ORR1D1 LTR MaLR 324 378 0 1 682 656 245 0 7 chrX 12838737 12838881 -153811415 + RSINE1 SINE B4 1 143 -22 1 682 21 57 0 0 chrX 12838959 12838994 -153811302 + AT_rich Low_complexity Low_complexity 1 35 0 1 682 580 273 140 43 chrX 12839003 12839325 -153810971 - RMER15 LTR ERVL -3 572 220 1 682 816 257 19 14 chrX 12839755 12839964 -153810332 + B3 SINE B2 2 211 -5 1 682 356 0 0 22 chrX 12839985 12840030 -153810266 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 682 538 233 62 68 chrX 12840051 12840212 -153810084 - RSINE1 SINE B4 -1 164 5 1 682 434 207 20 21 chrX 12840212 12840335 -153809961 - B1F SINE Alu -2 118 1 1 682 1202 272 26 15 chrX 12840438 12840777 -153809519 - L1MD LINE L1 -587 5772 5430 1 682 369 221 12 0 chrX 12840883 12840969 -153809327 - B1_Mur2 SINE Alu -7 142 56 1 682 481 272 78 32 chrX 12841082 12841365 -153808931 - L1MA4A LINE L1 -279 6021 5718 1 682 574 206 7 71 chrX 12841382 12841523 -153808773 - B1_Mur4 SINE Alu -8 142 11 1 682 24 0 0 0 chrX 12841526 12841550 -153808746 + AT_rich Low_complexity Low_complexity 1 24 0 1 682 1197 55 0 0 chrX 12841560 12841706 -153808590 - B1_Mm SINE Alu 0 147 2 1 682 189 0 0 0 chrX 12841706 12841727 -153808569 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 682 385 96 13 76 chrX 12841727 12841794 -153808502 - B1_Mus2 SINE Alu -10 137 75 1 682 224 288 151 48 chrX 12841731 12841841 -153808455 - ID_B1 SINE B4 -14 210 6 1 682 234 316 13 0 chrX 12841841 12841917 -153808379 - ID4 SINE ID -1 82 6 1 682 399 174 205 17 chrX 12841923 12842040 -153808256 - L1MD LINE L1 -863 5283 5145 1 682 283 298 32 11 chrX 12842042 12842137 -153808159 + MLT1A1 LTR MaLR 20 116 -292 1 682 378 298 118 55 chrX 12842185 12842423 -153807873 + ORR1E LTR MaLR 96 348 -11 1 682 1304 84 39 0 chrX 12842476 12842654 -153807642 + B2_Mm1a SINE B2 2 186 -7 1 682 200 188 0 0 chrX 12842702 12842734 -153807562 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 1 682 266 204 65 52 chrX 12843000 12843107 -153807189 - B1F SINE Alu -20 128 23 1 682 468 0 0 0 chrX 12843107 12843159 -153807137 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 682 506 211 132 0 chrX 12843705 12843819 -153806477 + RSINE1 SINE B4 3 131 -34 1 682 309 214 14 14 chrX 12843837 12843908 -153806388 + ID SINE ID 3 73 -151 1 682 361 262 69 38 chrX 12843952 12844083 -153806213 - MLT1A LTR MaLR -177 197 63 1 682 1183 81 0 0 chrX 12844436 12844584 -153805712 - B1_Mus1 SINE Alu 0 148 1 1 682 1109 112 53 0 chrX 12844597 12844766 -153805530 - B2_Mm1t SINE B2 -14 179 2 1 85 2125 92 76 0 chrX 12844810 12845114 -153805182 - ORR1A2 LTR MaLR 0 327 1 1 683 7465 107 19 29 chrX 12845114 12845188 -153805108 - ORR1A2-int LTR MaLR 0 1963 1890 1 683 1176 44 0 0 chrX 12845188 12845325 -153804971 + B1_Mus2 SINE Alu 1 137 -10 1 683 7465 107 19 29 chrX 12845325 12846509 -153803787 - ORR1A2-int LTR MaLR -74 1889 718 1 683 441 259 61 142 chrX 12846428 12846468 -153803828 - RLTR25A LTR ERVK -433 670 589 1 683 718 145 0 109 chrX 12846468 12846615 -153803681 - MT2B LTR ERVL -314 287 157 1 683 441 259 61 142 chrX 12846615 12846689 -153803607 - RLTR25A LTR ERVK -433 588 431 1 683 575 0 13 0 chrX 12846702 12846777 -153803519 - B1_Mus2 SINE Alu 0 147 72 1 683 774 42 31 0 chrX 12846778 12846874 -153803422 + IAPEz-int LTR ERVK 6381 6479 -2 1 683 1912 13 0 0 chrX 12846876 12847110 -153803186 + IAPLTR2_Mm LTR ERVK 1 234 -241 1 683 490 230 0 69 chrX 12847078 12847223 -153803073 - B1_Mm SINE Alu -12 135 1 1 683 1793 113 16 10 chrX 12847224 12847527 -153802769 - ORR1A2-int LTR MaLR -1443 520 216 1 683 354 81 145 0 chrX 12847525 12847587 -153802709 - ORR1A2-int LTR MaLR -1867 96 26 1 683 2152 85 70 29 chrX 12847591 12847905 -153802391 - ORR1A2 LTR MaLR 0 327 1 1 683 847 251 55 5 chrX 12847906 12848106 -153802190 + B3 SINE B2 1 210 -6 1 683 1185 54 0 26 chrX 12848108 12848260 -153802036 + B1_Mus1 SINE Alu 1 148 0 1 683 297 0 0 0 chrX 12848260 12848293 -153802003 + (A)n Simple_repeat Simple_repeat 1 33 0 1 683 414 0 0 0 chrX 12848376 12848422 -153801874 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 683 510 17 0 0 chrX 12848536 12848595 -153801701 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 683 376 250 148 52 chrX 12848621 12848756 -153801540 + RSINE1 SINE B4 14 161 -4 1 683 233 212 132 29 chrX 12848805 12848873 -153801423 + PB1D9 SINE Alu 5 79 -41 1 683 227 175 159 0 chrX 12848910 12848973 -153801323 + L1MA5 LINE L1 6043 6115 -185 1 683 456 19 0 0 chrX 12849027 12849080 -153801216 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 683 519 167 118 0 chrX 12849083 12849185 -153801111 - RSINE1 SINE B4 -38 127 14 1 683 405 0 0 0 chrX 12849185 12849230 -153801066 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 1 683 818 162 7 0 chrX 12849230 12849366 -153800930 - B1_Mur4 SINE Alu -13 137 1 1 683 1792 143 76 38 chrX 12849389 12849782 -153800514 - RMER17C LTR ERVK -2 408 1 1 683 711 217 14 0 chrX 12849792 12849930 -153800366 - ID_B1 SINE B4 -4 220 81 1 683 347 267 105 6 chrX 12849939 12850101 -153800195 + L1MA5 LINE L1 6118 6295 -5 1 683 737 193 34 39 chrX 12850259 12850437 -153799859 - B2_Mm2 SINE B2 -17 178 2 1 683 1527 62 16 0 chrX 12850788 12850980 -153799316 - B2_Mm2 SINE B2 0 195 1 1 683 241 347 10 10 chrX 12851070 12851166 -153799130 - PB1D10 SINE Alu -21 96 1 1 683 23 0 0 0 chrX 12851241 12851264 -153799032 + AT_rich Low_complexity Low_complexity 1 23 0 1 683 248 77 26 0 chrX 12851805 12851844 -153798452 + (TAA)n Simple_repeat Simple_repeat 2 41 0 1 683 24 53 0 0 chrX 12851854 12851892 -153798404 + AT_rich Low_complexity Low_complexity 1 38 0 1 683 350 291 21 56 chrX 12851915 12852057 -153798239 - RSINE1 SINE B4 -21 144 8 1 683 285 329 0 0 chrX 12852063 12852148 -153798148 - PB1D10 SINE Alu -20 97 13 1 683 667 140 30 0 chrX 12852314 12852414 -153797882 + PB1D9 SINE Alu 5 107 -13 1 683 392 192 69 20 chrX 12852559 12852660 -153797636 + PB1D10 SINE Alu 5 110 -7 1 683 250 227 176 49 chrX 12852723 12852825 -153797471 + PB1D10 SINE Alu 1 115 -2 1 683 2449 140 45 13 chrX 12853511 12853981 -153796315 + RMER6A LTR ERVK 266 750 -6 1 683 1148 88 7 0 chrX 12854014 12854161 -153796135 + B1_Mus1 SINE Alu 1 148 0 1 683 501 292 36 31 chrX 12854174 12854368 -153795928 - B3A SINE B2 0 198 4 1 683 1778 127 43 43 chrX 12854721 12854849 -153795447 + ORR1C2 LTR MaLR 36 159 -225 1 683 1277 98 27 0 chrX 12854849 12855032 -153795264 + B2_Mm1a SINE B2 2 189 -4 1 683 1778 127 43 43 chrX 12855032 12855250 -153795046 + ORR1C2 LTR MaLR 160 381 -3 1 683 805 241 26 21 chrX 12855413 12855604 -153794692 - B3A SINE B2 -3 195 4 1 683 1095 202 176 7 chrX 12855969 12856123 -153794173 - ORR1D1 LTR MaLR -2 372 173 1 683 189 0 0 0 chrX 12856123 12856144 -153794152 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 683 1095 202 176 7 chrX 12856144 12856273 -153794023 - ORR1D1 LTR MaLR -202 172 41 1 683 269 281 0 0 chrX 12856303 12856367 -153793929 + (CG)n Simple_repeat Simple_repeat 2 65 0 1 683 205 254 18 0 chrX 12857524 12857579 -153792717 + CT-rich Low_complexity Low_complexity 1 56 0 1 683 464 152 219 0 chrX 12859697 12859802 -153790494 + B3 SINE B2 3 130 -86 1 683 287 197 0 143 chrX 12860111 12860188 -153790108 + RSINE1 SINE B4 7 72 -93 1 683 256 191 54 81 chrX 12860170 12860244 -153790052 + B1_Mur1 SINE Alu 66 137 -12 1 683 525 255 148 20 chrX 12860617 12860813 -153789483 - ID_B1 SINE B4 -3 221 1 1 683 186 43 0 0 chrX 12860942 12860965 -153789331 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 683 189 0 0 0 chrX 12861611 12861632 -153788664 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 683 258 204 180 39 chrX 12861712 12861829 -153788467 - B1_Mus2 SINE Alu -22 127 2 1 683 311 162 88 0 chrX 12863465 12863533 -153786763 + B1_Mus1 SINE Alu 8 81 -67 1 683 1365 61 27 22 chrX 12863556 12863741 -153786555 + B2_Mm2 SINE B2 3 188 -7 1 683 287 284 82 49 chrX 12866191 12866313 -153783983 + RSINE1 SINE B4 9 134 -31 1 683 252 299 11 33 chrX 12867765 12867855 -153782441 - B1_Mur3 SINE Alu -61 88 1 1 683 267 210 69 69 chrX 12871326 12871413 -153778883 - PB1D9 SINE Alu -2 118 32 1 683 2683 42 12 9 chrX 12871413 12871747 -153778549 + L1Md_A LINE L1 6248 6582 0 1 683 297 108 277 0 chrX 12871760 12871825 -153778471 + B2_Mm1t SINE B2 1 83 -110 1 683 706 49 59 0 chrX 12871997 12872099 -153778197 - B1_Mm SINE Alu -23 124 17 1 683 189 0 0 0 chrX 12872530 12872551 -153777745 + (T)n Simple_repeat Simple_repeat 1 21 0 1 683 2253 212 104 56 chrX 12872968 12873825 -153776471 - RLTR13D6 LTR ERVK 0 929 1 1 683 1108 160 56 5 chrX 12874069 12874283 -153776013 - URR1A DNA MER1_type 0 226 2 1 683 1584 120 56 16 chrX 12874473 12874807 -153775489 + RLTR9A LTR ERVK 1 424 -13 1 683 5967 111 38 75 chrX 12874969 12875538 -153774758 + ETnERV2-int LTR ERVK 1094 1633 -5773 1 683 1173 62 7 0 chrX 12875538 12875682 -153774614 - B1_Mus1 SINE Alu -1 147 3 1 683 5967 111 38 75 chrX 12875682 12876207 -153774089 + ETnERV2-int LTR ERVK 1634 2148 -5258 1 683 1210 62 0 0 chrX 12876230 12876376 -153773920 - B1_Mm SINE Alu -1 146 1 1 683 9469 158 37 48 chrX 12876376 12878204 -153772092 + ETnERV2-int LTR ERVK 2134 3926 -3480 1 683 189 0 0 0 chrX 12878204 12878225 -153772071 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 683 9469 156 71 85 chrX 12878225 12878316 -153771980 + ETnERV2-int LTR ERVK 3927 4024 -3382 1 683 1098 56 7 27 chrX 12878316 12878452 -153771844 + B1_Mm SINE Alu 3 138 -9 1 683 243 0 0 0 chrX 12878452 12878479 -153771817 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 683 9049 156 71 85 chrX 12878489 12878507 -153771789 + RMER16-int LTR ERVK 2969 2971 -2435 1 683 1171 68 7 0 chrX 12878507 12878654 -153771642 + B1_Mus1 SINE Alu 1 148 0 1 683 9049 156 71 85 chrX 12878654 12879372 -153770924 + RMER16-int LTR ERVK 2972 3607 -1799 1 683 4108 75 26 21 chrX 12879981 12880549 -153769747 - RLTR45-int LTR ERVK -6673 571 1 1 683 2402 133 128 7 chrX 12880549 12880979 -153769317 - RLTR45 LTR ERVK 0 482 1 1 683 3426 130 25 47 chrX 12881654 12882080 -153768216 + RMER16-int LTR ERVK 3592 4019 -1387 1 683 1589 53 0 0 chrX 12882080 12882270 -153768026 - B2_Mm1a SINE B2 -3 190 1 1 683 3426 130 25 47 chrX 12882270 12882441 -153767855 + RMER16-int LTR ERVK 4020 4176 -1230 1 683 410 235 42 25 chrX 12882593 12882711 -153767585 + ETnERV2-int LTR ERVK 6306 6425 -981 1 683 383 93 0 36 chrX 12882920 12882976 -153767320 + ETnERV2-int LTR ERVK 7331 7384 -22 1 683 1945 143 30 14 chrX 12882995 12883357 -153766939 + RLTR9A LTR ERVK 1 368 0 1 683 466 244 62 62 chrX 12883465 12883657 -153766639 - L1MD2 LINE L1 -327 6032 5841 1 683 293 47 23 0 chrX 12883707 12883750 -153766546 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 683 975 69 0 0 chrX 12883750 12883881 -153766415 - B1_Mus1 SINE Alu -8 140 10 1 683 24 0 0 0 chrX 12884336 12884360 -153765936 + AT_rich Low_complexity Low_complexity 1 24 0 1 683 605 143 113 63 chrX 12884368 12884510 -153765786 + B1_Mur3 SINE Alu 1 149 0 1 683 585 179 97 28 chrX 12884554 12884698 -153765598 - RSINE1 SINE B4 0 165 12 1 683 671 235 116 10 chrX 12884695 12884893 -153765403 - B4A SINE B4 -72 220 2 1 683 227 228 34 34 chrX 12884928 12884987 -153765309 - B1F1 SINE Alu -90 59 1 1 683 233 167 0 53 chrX 12885028 12885045 -153765251 + T-rich Low_complexity Low_complexity 40 54 0 1 683 720 0 0 0 chrX 12885045 12885125 -153765171 + (TTC)n Simple_repeat Simple_repeat 2 81 0 1 683 233 167 0 53 chrX 12885125 12885164 -153765132 + T-rich Low_complexity Low_complexity 1 39 0 1 683 4971 76 6 0 chrX 12885168 12885815 -153764481 - L1_Mus1 LINE L1 0 6567 5917 1 683 469 229 180 0 chrX 12885815 12885937 -153764359 - B1_Mur1 SINE Alu -5 144 1 1 683 661 232 184 14 chrX 12885953 12886241 -153764055 - L1MD2 LINE L1 -1205 4941 4605 1 683 518 252 0 51 chrX 12886482 12886620 -153763676 + ID_B1 SINE B4 86 216 -8 1 683 333 0 0 0 chrX 12886781 12886818 -153763478 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 683 345 221 180 63 chrX 12886818 12886929 -153763367 - RSINE1 SINE B4 -33 132 9 1 683 3593 161 168 15 chrX 12886964 12887710 -153762586 - RMER13A LTR ERVK 0 860 1 1 683 225 267 118 11 chrX 12887722 12887900 -153762396 - L1M5 LINE L1 -1807 4339 4143 1 683 641 236 55 126 chrX 12888073 12888272 -153762024 - B3A SINE B2 -9 186 2 1 683 804 196 0 26 chrX 12888363 12888515 -153761781 - B1_Mur3 SINE Alu -1 148 1 1 683 418 179 26 0 chrX 12888937 12889015 -153761281 + PB1D7 SINE Alu 40 119 -1 1 683 1035 143 79 17 chrX 12889069 12889247 -153761049 + B2_Mm2 SINE B2 1 189 -6 1 683 1165 68 7 0 chrX 12889809 12889955 -153760341 + B1_Mus2 SINE Alu 1 147 0 1 683 180 0 0 0 chrX 12889955 12889975 -153760321 + (A)n Simple_repeat Simple_repeat 1 20 0 1 683 1245 226 42 31 chrX 12890259 12890547 -153759749 + B4 SINE B4 1 291 -1 1 683 1536 215 77 48 chrX 12890755 12891209 -153759087 - RMER19C LTR ERVK 0 611 145 1 683 770 179 52 0 chrX 12891254 12891388 -153758908 - B1_Mur4 SINE Alu -9 141 1 1 683 279 0 0 0 chrX 12891395 12891426 -153758870 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 683 1106 53 0 0 chrX 12891427 12891558 -153758738 - B1_Mus2 SINE Alu -12 135 5 1 683 20924 93 5 4 chrX 12891601 12894734 -153755562 - L1_Mus1 LINE L1 -504 6063 2930 1 683 4574 8 0 0 chrX 12894735 12895228 -153755068 - MT2_Mm LTR ERVL 0 493 1 1 683 321 0 0 0 chrX 12895228 12895266 -153755030 - MERVL-int LTR ERVL 0 5485 5448 1 683 324 177 12 37 chrX 12895266 12895348 -153754948 - ORR1A3-int LTR MaLR -1323 640 561 1 683 48217 16 8 0 chrX 12895348 12900673 -153749623 - MERVL-int LTR ERVL -120 5365 1 1 683 4574 8 0 0 chrX 12900673 12901166 -153749130 - MT2_Mm LTR ERVL 0 493 1 1 683 11757 94 20 0 chrX 12901166 12902943 -153747353 - L1_Mus1 LINE L1 -2950 2933 1105 1 683 3226 156 98 55 chrX 12904218 12904401 -153745895 - L1_Mus1 LINE L1 -5493 1123 949 1 683 1244 41 0 0 chrX 12904401 12904547 -153745749 + B1_Mm SINE Alu 1 146 -1 1 683 3226 156 98 55 chrX 12904547 12905076 -153745220 - L1_Mus1 LINE L1 -5668 948 380 1 683 801 194 211 58 chrX 12905086 12905517 -153744779 + RLTR20A1 LTR ERVK 55 551 0 1 683 670 264 7 0 chrX 12905738 12905886 -153744410 + B1F2 SINE Alu 1 149 0 1 683 672 219 74 33 chrX 12905897 12906101 -153744195 + B3A SINE B2 1 207 -9 1 683 221 293 67 0 chrX 12906187 12906262 -153744034 + ID2 SINE ID 2 81 -2 1 683 596 247 0 46 chrX 12906279 12906432 -153743864 + B1F SINE Alu 1 146 -3 1 683 491 258 144 53 chrX 12906478 12906666 -153743630 - ID_B1 SINE B4 -6 218 14 1 683 488 223 25 8 chrX 12906774 12906896 -153743400 - ID_B1 SINE B4 -10 214 91 1 683 727 242 192 18 chrX 12907064 12907204 -153743092 - L1MC LINE L1 -2888 3258 3067 1 683 1734 150 165 8 chrX 12907204 12907568 -153742728 - MTC LTR MaLR 0 421 1 1 683 727 242 192 18 chrX 12907568 12907713 -153742583 - L1MC LINE L1 -3080 3066 2923 1 683 556 216 29 29 chrX 12907822 12907960 -153742336 - B1F1 SINE Alu -1 148 11 1 683 234 256 93 0 chrX 12907978 12908064 -153742232 - L1M5 LINE L1 -3248 2898 2805 1 683 683 263 20 31 chrX 12908100 12908296 -153742000 + ID_B1 SINE B4 24 217 -7 1 683 845 133 59 0 chrX 12908408 12908543 -153741753 + B1_Mur4 SINE Alu 2 144 -6 1 683 396 0 0 0 chrX 12908857 12908901 -153741395 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 683 384 305 15 15 chrX 12909175 12909305 -153740991 + ID_B1 SINE B4 88 217 -7 1 683 343 283 19 0 chrX 12909350 12909456 -153740840 - L1MD LINE L1 -3476 2670 2563 1 683 357 254 87 8 chrX 12909564 12909691 -153740605 - MER2 DNA MER2_type -138 207 71 1 683 785 201 2 30 chrX 12909715 12909908 -153740388 + B3 SINE B2 3 179 -14 1 683 238 278 0 0 chrX 12909905 12909959 -153740337 - ID4_ SINE ID -3 80 27 1 683 399 273 147 29 chrX 12910019 12910223 -153740073 + Lx8 LINE L1 7244 7471 -2 1 683 392 206 82 27 chrX 12910326 12910436 -153739860 - PB1D7 SINE Alu 0 120 5 1 683 537 180 0 11 chrX 12910480 12910570 -153739726 - 5S rRNA rRNA -31 90 2 1 683 3503 127 54 78 chrX 12910575 12911201 -153739095 + RMER19C LTR ERVK 1 611 0 1 683 18970 127 16 11 chrX 12911201 12912599 -153737697 + MurERV4_19-int LTR ERVK 1 1414 -4366 1 683 1063 140 5 70 chrX 12912599 12912799 -153737497 + B2_Mm2 SINE B2 2 188 -7 1 683 18970 127 16 11 chrX 12912799 12914222 -153736074 + MurERV4_19-int LTR ERVK 1415 2838 -2942 1 683 2677 231 40 65 chrX 12914222 12915195 -153735101 + RMER17B LTR ERVK 1 898 -10 1 683 2501 120 3 3 chrX 12915203 12915570 -153734726 + MurERV4_19-int LTR ERVK 2829 3195 -2585 1 683 906 98 45 0 chrX 12915570 12915703 -153734593 + B1_Mus1 SINE Alu 1 139 -9 1 683 637 170 9 0 chrX 12915711 12915823 -153734473 + MurERV4_19-int LTR ERVK 3168 3280 -2500 1 683 5261 130 72 25 chrX 12915827 12916697 -153733599 - Lx2 LINE L1 -1 6996 6086 1 683 4875 125 1 9 chrX 12916697 12916760 -153733536 + L1_Mm LINE L1 3940 4002 -1881 1 683 2718 134 24 49 chrX 12916760 12917254 -153733042 - RLTR45 LTR ERVK 0 482 1 1 683 4875 125 1 9 chrX 12917254 12917948 -153732348 + L1_Mm LINE L1 4003 4691 -1192 1 683 243 302 81 11 chrX 12918061 12918148 -153732148 - PB1D7 SINE Alu -15 105 13 1 683 204 163 0 0 chrX 12918181 12918224 -153732072 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 683 680 299 0 36 chrX 12918227 12918421 -153731875 - B4 SINE B4 0 292 106 1 683 853 112 26 0 chrX 12918435 12918587 -153731709 + URR1B DNA MER1_type 70 225 0 1 683 419 261 11 0 chrX 12918590 12918678 -153731618 - B1_Mur3 SINE Alu -60 89 1 1 683 348 261 5 130 chrX 12918693 12918766 -153731530 - L1MC4a LINE L1 -832 7050 6993 1 683 642 208 12 127 chrX 12918766 12918931 -153731365 - B1_Mur4 SINE Alu 0 150 5 1 683 348 261 5 130 chrX 12918931 12919042 -153731254 - L1MC4a LINE L1 -890 6992 6889 1 683 996 112 7 0 chrX 12919044 12919187 -153731109 - B1_Mus1 SINE Alu 0 148 5 1 683 8195 63 2 3 chrX 12919245 12920745 -153729551 - L1_Mus1 LINE L1 0 6567 5067 1 683 720 169 22 7 chrX 12921121 12921258 -153729038 + B1_Mur1 SINE Alu 9 147 -2 1 683 351 0 0 0 chrX 12921418 12921457 -153728839 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 683 447 263 50 56 chrX 12922653 12922814 -153727482 + RSINE1 SINE B4 1 160 -5 1 683 27 0 0 0 chrX 12923142 12923169 -153727127 + GC_rich Low_complexity Low_complexity 1 27 0 1 683 2013 129 29 32 chrX 12923434 12923842 -153726454 + RMER17C LTR ERVK 4 410 0 1 683 328 333 0 0 chrX 12924122 12924215 -153726081 + GA-rich Low_complexity Low_complexity 1 93 0 1 683 642 171 0 37 chrX 12925122 12925256 -153725040 + B1_Mus2 SINE Alu 5 133 -14 1 683 771 69 0 0 chrX 12925256 12925358 -153724938 + (GAAA)n Simple_repeat Simple_repeat 1 102 0 1 683 439 316 23 6 chrX 12925379 12925554 -153724742 + L1M4 LINE L1 5622 5799 -379 1 683 859 124 57 21 chrX 12925558 12925698 -153724598 + B1_Mur3 SINE Alu 3 147 -2 1 683 249 33 0 0 chrX 12925705 12925735 -153724561 + (A)n Simple_repeat Simple_repeat 1 30 0 1 683 435 230 1 11 chrX 12925744 12925850 -153724446 + B1F SINE Alu 9 114 -6 1 683 1513 204 115 13 chrX 12926241 12926633 -153723663 + RLTR41 LTR ERV1 1 432 -14 1 683 398 371 136 0 chrX 12926634 12926834 -153723462 + B4A SINE B4 5 233 -59 1 683 748 214 37 3 chrX 12926834 12927027 -153723269 + B3A SINE B2 1 207 -9 1 683 650 245 65 0 chrX 12927006 12927145 -153723151 + ID_B1 SINE B4 64 211 -13 1 683 420 131 81 55 chrX 12927194 12927293 -153723003 + PB1D7 SINE Alu 18 119 -1 1 683 836 161 76 22 chrX 12927295 12927479 -153722817 + B2_Mm2 SINE B2 2 195 0 1 683 397 342 98 39 chrX 12927550 12927754 -153722542 + LTR81B LTR ERV1? 235 450 -943 1 683 328 239 40 27 chrX 12928982 12929092 -153721204 - B1F SINE Alu 0 148 33 1 683 465 19 0 0 chrX 12929227 12929281 -153721015 + (TCCA)n Simple_repeat Simple_repeat 3 56 0 1 683 268 176 0 38 chrX 12929830 12929883 -153720413 - RSINE1 SINE B4 -96 69 19 1 683 573 270 24 0 chrX 12929897 12930023 -153720273 - B4A SINE B4 -63 229 101 1 683 458 288 28 35 chrX 12930077 12930221 -153720075 - ID_B1 SINE B4 0 224 82 1 683 241 264 14 27 chrX 12930313 12930387 -153719909 - ID2 SINE ID 0 83 11 1 683 428 290 136 6 chrX 12930398 12930575 -153719721 + LTR16C LTR ERVL 251 450 -39 1 683 902 244 11 0 chrX 12930704 12930884 -153719412 + B3 SINE B2 1 182 -34 1 683 411 214 107 0 chrX 12931041 12931144 -153719152 + B3A SINE B2 9 122 -76 1 683 455 312 38 24 chrX 12931148 12931361 -153718935 - Tigger5 DNA MER2_type -54 2352 2137 1 683 588 234 58 115 chrX 12931522 12931589 -153718707 - B3A SINE B2 -2 196 134 1 683 4738 168 15 47 chrX 12931589 12932527 -153717769 - RMER13B LTR ERVK 0 908 1 1 683 588 234 58 115 chrX 12932527 12932667 -153717629 - B3A SINE B2 -65 133 1 1 683 365 247 34 0 chrX 12932675 12932764 -153717532 - PB1D7 SINE Alu -7 113 22 1 683 436 302 36 3 chrX 12932773 12932929 -153717367 - B4 SINE B4 -67 157 1 1 683 21 36 0 0 chrX 12933049 12933077 -153717219 + AT_rich Low_complexity Low_complexity 1 28 0 1 683 485 185 179 32 chrX 12933082 12933205 -153717091 + B1_Mur4 SINE Alu 2 142 -8 1 683 198 0 0 0 chrX 12933224 12933246 -153717050 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 1 683 462 193 129 40 chrX 12933269 12933393 -153716903 - RSINE1 SINE B4 0 165 31 1 683 291 229 0 16 chrX 12933452 12933514 -153716782 + ID4 SINE ID 4 64 -19 1 683 346 248 231 0 chrX 12933519 12933560 -153716736 + B1F1 SINE Alu 1 149 0 1 683 402 188 12 0 chrX 12933560 12933640 -153716656 + ID_B1 SINE B4 144 224 0 1 683 497 266 0 52 chrX 12933691 12933826 -153716470 + B1F1 SINE Alu 10 137 -12 1 683 236 210 63 16 chrX 12934275 12934338 -153715958 + CT-rich Low_complexity Low_complexity 2 67 0 1 683 372 22 0 0 chrX 12934598 12934643 -153715653 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 683 887 269 80 15 chrX 12934661 12934925 -153715371 - B4A SINE B4 -10 282 2 1 683 361 306 168 15 chrX 12935068 12935264 -153715032 - L1MC LINE L1 -2155 5727 5502 1 683 742 309 47 14 chrX 12935276 12935555 -153714741 - MLT1E3 LTR MaLR -2 622 335 1 683 1125 196 9 9 chrX 12935737 12935953 -153714343 - B3 SINE B2 0 216 1 1 683 230 191 46 31 chrX 12935976 12936041 -153714255 + B1_Mus1 SINE Alu 38 103 -45 1 683 455 281 115 31 chrX 12936122 12936190 -153714106 - B4 SINE B4 0 292 223 1 683 243 0 0 0 chrX 12936190 12936217 -153714079 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 683 455 281 115 31 chrX 12936217 12936228 -153714068 - B4 SINE B4 -70 222 86 1 683 608 164 0 9 chrX 12936228 12936339 -153713957 - B1_Mur2 SINE Alu -39 110 1 1 683 940 97 20 27 chrX 12936339 12936488 -153713808 - B1_Mus1 SINE Alu 0 148 1 1 683 240 276 184 0 chrX 12936503 12936579 -153713717 - ID_B1 SINE B4 -54 170 81 1 683 200 104 39 59 chrX 12936798 12936849 -153713447 + A-rich Low_complexity Low_complexity 2 51 0 1 683 562 288 0 0 chrX 12936974 12937106 -153713190 - ID_B1 SINE B4 -9 215 84 1 683 213 39 0 0 chrX 12937108 12937134 -153713162 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1 683 1093 89 14 0 chrX 12937156 12937302 -153712994 - B1_Mus1 SINE Alu 0 148 1 1 683 714 176 309 0 chrX 12937307 12937472 -153712824 - B3 SINE B2 0 216 1 1 683 270 231 35 93 chrX 12937564 12937631 -153712665 - PB1D10 SINE Alu -5 112 50 1 683 3125 140 27 2 chrX 12937631 12938118 -153712178 + RLTR19 LTR ERVK 1 499 0 1 683 270 231 35 93 chrX 12938118 12938136 -153712160 - PB1D10 SINE Alu -68 49 32 1 683 1952 145 118 0 chrX 12938143 12938481 -153711815 - RLTR14 LTR ERV1 -2 380 3 1 683 345 200 36 36 chrX 12938991 12939074 -153711222 - B1F SINE Alu 0 149 67 1 683 306 176 0 0 chrX 12939077 12939128 -153711168 - B1F SINE Alu -28 121 71 1 683 528 273 8 8 chrX 12939125 12939254 -153711042 - ID_B1 SINE B4 -16 208 80 1 683 1035 113 7 0 chrX 12939286 12939428 -153710868 + B1_Mus2 SINE Alu 5 147 0 1 683 1439 154 62 43 chrX 12939506 12939811 -153710485 - ORR1B1 LTR MaLR 0 394 84 1 683 3515 93 23 35 chrX 12939812 12940177 -153710119 - RLTR19C LTR ERVK 0 506 139 1 683 195 42 0 0 chrX 12940177 12940201 -153710095 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 683 1047 82 0 0 chrX 12940201 12940336 -153709960 - B1_Mus1 SINE Alu -13 135 1 1 683 3515 93 23 35 chrX 12940336 12940481 -153709815 - RLTR19C LTR ERVK -368 138 2 1 683 610 97 32 96 chrX 12940481 12940606 -153709690 - RLTR19-int LTR ERVK 0 6137 6021 1 683 3782 103 12 52 chrX 12940592 12941167 -153709129 - RLTR19-int LTR ERVK -66 6071 5520 1 683 438 77 15 0 chrX 12941167 12941232 -153709064 - RLTR19-int LTR ERVK -255 5882 5817 1 683 1600 94 37 4 chrX 12941230 12941476 -153708820 + RLTR19-int LTR ERVK 3531 3784 -2353 1 683 6820 96 54 21 chrX 12941467 12942398 -153707898 - RLTR19-int LTR ERVK -610 5527 4563 1 683 269 26 26 0 chrX 12942398 12942436 -153707860 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 683 1121 72 0 0 chrX 12942436 12942574 -153707722 - B1_Mus1 SINE Alu -9 139 2 1 683 6820 96 54 21 chrX 12942574 12942611 -153707685 - RLTR19-int LTR ERVK -1575 4562 4527 1 683 1476 128 48 57 chrX 12942644 12942976 -153707320 - RMER17B LTR ERVK -68 890 562 1 683 651 125 8 67 chrX 12942978 12943098 -153707198 - RMER17B LTR ERVK -845 113 1 1 683 3012 90 21 109 chrX 12943105 12943212 -153707084 - RLTR19-int LTR ERVK -2206 3931 3834 1 683 1181 56 0 0 chrX 12943212 12943354 -153706942 + B1_Mus2 SINE Alu 1 142 -5 1 683 12603 99 45 69 chrX 12943354 12944422 -153705874 - RLTR19-int LTR ERVK -2304 3833 2648 1 683 240 86 0 0 chrX 12944422 12944457 -153705839 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 683 12603 107 63 37 chrX 12944457 12945902 -153704394 - RLTR19-int LTR ERVK -3490 2647 1166 1 683 268 192 19 0 chrX 12945900 12945952 -153704344 + RLTR19-int LTR ERVK 1150 1202 -4935 1 683 265 60 20 0 chrX 12945959 12946009 -153704287 - B2_Mm1t SINE B2 -5 188 138 1 683 285 91 0 0 chrX 12946008 12946052 -153704244 - B2_Mm2 SINE B2 -94 101 58 1 683 1235 107 23 0 chrX 12946106 12946283 -153704013 - B2_Mm2 SINE B2 -14 181 1 1 683 896 91 15 0 chrX 12946285 12946417 -153703879 - RLTR19-int LTR ERVK -4991 1146 1013 1 683 556 236 30 71 chrX 12946759 12946928 -153703368 - RLTR33 LTR ERVK 0 678 517 1 683 270 0 0 0 chrX 12946937 12946967 -153703329 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1 683 1254 37 0 6 chrX 12946967 12947130 -153703166 - B2_Mm2 SINE B2 -33 162 1 1 683 3360 128 18 2 chrX 12947130 12947658 -153702638 - RLTR33 LTR ERVK -141 537 1 1 683 213 39 0 0 chrX 12947951 12947977 -153702319 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 683 555 242 72 8 chrX 12947979 12948104 -153702192 - RSINE1 SINE B4 -29 136 4 1 683 590 236 7 53 chrX 12948242 12948394 -153701902 - B1F1 SINE Alu 0 149 5 1 683 1085 221 5 14 chrX 12948418 12948634 -153701662 - B3 SINE B2 -2 214 1 1 683 535 258 0 30 chrX 12948696 12948828 -153701468 - ID_B1 SINE B4 -11 213 86 1 683 227 171 0 0 chrX 12948935 12948976 -153701320 + RSINE1 SINE B4 90 130 -35 1 683 270 0 0 0 chrX 12949004 12949034 -153701262 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 683 261 0 0 0 chrX 12949034 12949062 -153701234 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 683 2461 152 12 51 chrX 12949204 12949717 -153700579 + RLTR28 LTR ERVL 9 501 -23 1 683 368 278 26 36 chrX 12950489 12950636 -153699660 - MIRb SINE MIR 0 262 111 1 683 253 200 15 15 chrX 12950888 12950915 -153699381 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1 683 422 187 167 146 chrX 12950915 12951059 -153699237 - B1_Mur2 SINE Alu -1 148 2 1 683 253 200 15 15 chrX 12951059 12951097 -153699199 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 1 683 479 256 41 16 chrX 12951106 12951229 -153699067 - RSINE1 SINE B4 -38 127 2 1 683 391 270 209 56 chrX 12951497 12951889 -153698407 - MLT1D LTR MaLR -6 499 48 1 683 747 229 146 11 chrX 12951936 12952121 -153698175 - B3 SINE B2 -5 211 2 1 683 783 257 44 135 chrX 12952121 12952311 -153697985 + MTD LTR MaLR 3 191 -228 1 683 1791 109 27 66 chrX 12952311 12952646 -153697650 + RLTRETN_Mm LTR ERVK 1 322 0 1 683 783 257 44 135 chrX 12952646 12952818 -153697478 + MTD LTR MaLR 192 325 -94 1 683 1035 114 0 21 chrX 12952818 12952961 -153697335 - B1_Mur4 SINE Alu -10 140 1 1 683 783 257 44 135 chrX 12952961 12953056 -153697240 + MTD LTR MaLR 326 419 0 1 683 919 174 19 19 chrX 12953301 12953506 -153696790 - ORR1A4 LTR MaLR 0 329 125 1 683 3286 147 94 3 chrX 12953470 12954066 -153696230 + RMER19B LTR ERVK 39 688 -214 1 683 622 212 15 0 chrX 12954065 12954197 -153696099 - RLTR11A LTR ERVK -78 450 317 1 683 695 143 101 36 chrX 12954284 12954422 -153695874 - B1_Mm SINE Alu 0 147 1 1 683 24 67 0 0 chrX 12954470 12954515 -153695781 + AT_rich Low_complexity Low_complexity 1 45 0 1 683 407 261 75 8 chrX 12954650 12954770 -153695526 - B1F1 SINE Alu -21 128 1 1 683 261 190 86 0 chrX 12954719 12954777 -153695519 - ID_B1 SINE B4 -92 132 70 1 683 571 167 31 16 chrX 12955829 12955957 -153694339 - RLTR11A LTR ERVK -197 331 202 1 683 363 219 14 0 chrX 12956005 12956078 -153694218 - RLTR11A LTR ERVK -447 81 8 1 683 541 226 60 0 chrX 12956338 12956471 -153693825 + B1F SINE Alu 1 141 -8 1 683 976 197 48 15 chrX 12956483 12956689 -153693607 + B3 SINE B2 4 216 0 1 683 1512 198 53 37 chrX 12956690 12956962 -153693334 + Lx9 LINE L1 5093 5340 -803 1 683 267 54 0 0 chrX 12956962 12956999 -153693297 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 1 683 1512 195 50 37 chrX 12956999 12957153 -153693143 + Lx9 LINE L1 5316 5475 -372 1 683 763 157 15 22 chrX 12957200 12957337 -153692959 + B1_Mus2 SINE Alu 9 144 -3 1 683 242 289 22 104 chrX 12957237 12957372 -153692924 + RLTR25A LTR ERVK 522 645 -458 1 683 1634 316 78 48 chrX 12957382 12957694 -153692602 + Lx9 LINE L1 5633 5931 -1542 1 683 2103 104 30 60 chrX 12957694 12958030 -153692266 + ORR1A3 LTR MaLR 1 326 0 1 683 1872 275 128 22 chrX 12958030 12958788 -153691508 + Lx9 LINE L1 5932 6878 -766 1 683 6994 170 26 25 chrX 12958801 12960440 -153689856 - Lx5 LINE L1 -43 7417 5467 1 683 5902 127 57 5 chrX 12960436 12960634 -153689662 - L1_Mur2 LINE L1 -3607 2270 2073 1 683 321 26 0 0 chrX 12960634 12960672 -153689624 + (TGG)n Simple_repeat Simple_repeat 1 38 0 1 683 5902 137 89 4 chrX 12960672 12961802 -153688494 - L1_Mur2 LINE L1 -3805 2072 817 1 683 240 59 0 0 chrX 12962090 12962124 -153688172 + (TTG)n Simple_repeat Simple_repeat 3 36 0 1 683 714 129 54 39 chrX 12962125 12962254 -153688042 - B1_Mus1 SINE Alu -8 140 10 1 683 1504 298 61 55 chrX 12962254 12962902 -153687394 + Lx9 LINE L1 6859 7489 -155 1 683 309 51 0 0 chrX 12962902 12962941 -153687355 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 683 1504 298 61 55 chrX 12962941 12963049 -153687247 + Lx9 LINE L1 7490 7619 -25 1 683 291 273 82 41 chrX 12963049 12963244 -153687052 + YREP_Mm Unknown Unknown 94 296 -1516 1 683 709 218 83 0 chrX 12963127 12963283 -153687013 - ID_B1 SINE B4 -5 219 51 1 683 2099 80 47 36 chrX 12963287 12963852 -153686444 - RLTR44D LTR ERVK -21 481 1 1 683 225 254 18 0 chrX 12963852 12963907 -153686389 - ID2 SINE ID -27 56 1 1 683 517 285 17 2 chrX 12963921 12964053 -153686243 + B1F1 SINE Alu 1 131 -18 1 683 3940 45 6 4 chrX 12964069 12964543 -153685753 - MT2C_Mm LTR ERVL 0 475 1 1 683 310 169 0 33 chrX 12964768 12964829 -153685467 + B1_Mur4 SINE Alu 2 60 -90 1 683 278 8 0 160 chrX 12964832 12964982 -153685314 + (CAGAG)n Simple_repeat Simple_repeat 5 130 0 1 683 450 235 0 0 chrX 12964984 12965154 -153685142 + GA-rich Low_complexity Low_complexity 2 171 0 1 683 521 151 0 23 chrX 12965155 12965243 -153685053 + (CAGAGA)n Simple_repeat Simple_repeat 1 86 0 1 683 541 136 19 0 chrX 12965243 12965346 -153684950 + B1_Mus2 SINE Alu 42 146 -1 1 683 573 300 39 26 chrX 12965552 12965706 -153684590 + RSINE1 SINE B4 4 159 -6 1 683 523 198 57 8 chrX 12965752 12965874 -153684422 + B3 SINE B2 1 128 -88 1 683 3070 76 8 0 chrX 12965964 12966361 -153683935 + MTB LTR MaLR 1 400 0 1 683 22 0 0 0 chrX 12966658 12966680 -153683616 + AT_rich Low_complexity Low_complexity 1 22 0 1 683 345 182 76 0 chrX 12966687 12966753 -153683543 + B3A SINE B2 1 71 -127 1 683 1440 194 0 0 chrX 12966751 12967019 -153683277 + ORR1C1 LTR MaLR 111 378 0 1 683 1648 162 40 84 chrX 12967021 12967391 -153682905 + ORR1C1 LTR MaLR 25 378 0 1 683 605 235 141 32 chrX 12967431 12967549 -153682747 + RLTR19-int LTR ERVK 2338 2464 -3673 1 683 180 0 0 0 chrX 12967549 12967569 -153682727 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 683 605 239 108 40 chrX 12967569 12967744 -153682552 + RLTR19-int LTR ERVK 2465 2581 -3556 1 683 2606 170 71 24 chrX 12967770 12967795 -153682501 + RMER4B LTR ERVK 1 33 -552 1 683 207 0 0 0 chrX 12967795 12967818 -153682478 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 683 2334 82 28 6 chrX 12967823 12968140 -153682156 - ORR1A3 LTR MaLR -2 324 1 1 683 2606 170 71 24 chrX 12968140 12968656 -153681640 + RMER4B LTR ERVK 36 573 -12 1 683 368 239 52 134 chrX 12968680 12968995 -153681301 + MYSERV6-int LTR ERVK 7399 7499 -1460 1 683 365 127 11 151 chrX 12968974 12969067 -153681229 + RLTR19-int LTR ERVK 2946 3025 -3112 1 683 1218 41 7 0 chrX 12970282 12970428 -153679868 + B1_Mus1 SINE Alu 2 148 0 1 683 1596 249 36 82 chrX 12970480 12970978 -153679318 + Lx8 LINE L1 6995 7469 -4 1 683 306 147 0 0 chrX 12971378 12971446 -153678850 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 683 522 214 23 31 chrX 12971511 12971641 -153678655 + B1_Mur1 SINE Alu 18 146 -3 1 683 489 160 106 39 chrX 12971678 12971782 -153678514 - B1F SINE Alu -2 147 37 1 683 342 219 0 0 chrX 12972242 12972306 -153677990 + PB1 SINE Alu 27 90 -37 1 683 1181 175 56 24 chrX 12972321 12972573 -153677723 + ORR1D1 LTR MaLR 107 366 -8 1 683 1171 68 0 0 chrX 12972578 12972724 -153677572 + B1_Mus1 SINE Alu 2 147 -1 1 683 554 82 10 30 chrX 12972732 12972833 -153677463 + (GAAA)n Simple_repeat Simple_repeat 2 100 0 1 683 229 353 102 25 chrX 12972889 12973046 -153677250 + Zaphod DNA Tip100 44 212 -3819 1 683 657 200 0 0 chrX 12973046 12973166 -153677130 + PB1D7 SINE Alu 1 120 0 1 683 255 323 199 23 chrX 12973210 12973381 -153676915 + Zaphod DNA Tip100 216 416 -3615 1 683 1763 185 17 30 chrX 12973385 12973493 -153676803 - MTD LTR MaLR -8 411 299 1 683 1991 128 64 23 chrX 12973493 12973838 -153676458 + RLTR15 LTR ERVK 1 359 0 1 683 1763 185 17 30 chrX 12973838 12974091 -153676205 - MTD LTR MaLR -121 298 55 1 683 814 128 0 8 chrX 12974093 12974219 -153676077 - RLTR14 LTR ERV1 0 382 258 1 683 810 176 0 0 chrX 12974230 12974383 -153675913 + CT-rich Low_complexity Low_complexity 2 154 0 1 683 1203 68 0 0 chrX 12974386 12974534 -153675762 - B1_Mus1 SINE Alu 0 148 1 1 683 245 79 0 26 chrX 12974536 12974575 -153675721 - RLTR14 LTR ERV1 -126 256 219 1 683 765 209 7 0 chrX 12974610 12974749 -153675547 + URR1B DNA MER1_type 1 140 -85 1 683 854 113 0 0 chrX 12974750 12974874 -153675422 + B1_Mur4 SINE Alu 6 129 -21 1 683 584 104 10 0 chrX 12974879 12974975 -153675321 + URR1B DNA MER1_type 129 225 0 1 683 399 278 72 0 chrX 12975449 12975546 -153674750 - ID_B1 SINE B4 -19 205 102 1 683 240 303 0 26 chrX 12975753 12975831 -153674465 - L2a LINE L2 0 3426 3351 1 683 403 287 10 0 chrX 12975889 12975990 -153674306 + B3A SINE B2 59 160 -38 1 683 243 0 0 0 chrX 12975999 12976026 -153674270 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 85 356 197 26 13 chrX 12976066 12976143 -153674153 + ID SINE ID 6 83 -141 1 684 261 185 28 97 chrX 12976389 12976461 -153673835 - ID SINE ID -157 67 1 1 684 567 202 0 0 chrX 12976534 12976638 -153673658 + PB1D10 SINE Alu 1 104 -13 1 684 861 178 14 0 chrX 12976646 12976792 -153673504 - B1_Mur1 SINE Alu 0 149 2 1 684 30 0 0 0 chrX 12976806 12976836 -153673460 + AT_rich Low_complexity Low_complexity 1 30 0 1 684 462 18 0 0 chrX 12976842 12976897 -153673399 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 684 347 223 191 0 chrX 12976898 12976992 -153673304 - RSINE1 SINE B4 -50 115 4 1 684 325 268 4 54 chrX 12977089 12977229 -153673067 - ID_B1 SINE B4 -38 186 6 1 684 883 274 28 0 chrX 12977239 12977454 -153672842 - ID_B1 SINE B4 -3 221 1 1 684 253 338 0 53 chrX 12980022 12980097 -153670199 - RSINE1 SINE B4 -11 154 84 1 684 21 36 0 0 chrX 12980097 12980125 -153670171 + AT_rich Low_complexity Low_complexity 1 28 0 1 684 309 100 0 0 chrX 12980130 12980180 -153670116 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 684 338 212 0 0 chrX 12980188 12980254 -153670042 - B3A SINE B2 -53 145 80 1 684 408 348 38 14 chrX 12980264 12980477 -153669819 - B4 SINE B4 -74 218 1 1 684 433 323 38 8 chrX 12980807 12980938 -153669358 - B1F SINE Alu -6 143 9 1 684 537 272 0 0 chrX 12980994 12981108 -153669188 - PB1D7 SINE Alu -2 118 5 1 684 443 229 0 0 chrX 12981166 12981249 -153669047 - PB1D7 SINE Alu -17 103 21 1 684 799 88 0 0 chrX 12981272 12981386 -153668910 - B1_Mus1 SINE Alu 0 148 35 1 684 531 228 25 76 chrX 12981521 12981678 -153668618 + B1F SINE Alu 1 149 0 1 684 1417 57 6 0 chrX 12981678 12981996 -153668300 + (GAA)n Simple_repeat Simple_repeat 1 320 0 1 684 235 305 108 12 chrX 12982037 12982120 -153668176 + B1F1 SINE Alu 1 91 -58 1 684 566 217 26 0 chrX 12982392 12982507 -153667789 - PB1D7 SINE Alu 0 120 3 1 684 2909 70 0 0 chrX 12982730 12983134 -153667162 - L1Md_A LINE L1 0 6582 6210 1 684 290 269 30 0 chrX 12983589 12983656 -153666640 + ID4 SINE ID 4 72 -11 1 684 743 182 0 108 chrX 12983702 12983868 -153666428 - B1_Mur3 SINE Alu 0 149 2 1 684 274 77 0 0 chrX 12983869 12983910 -153666386 - MT2A LTR ERVL 0 533 453 1 684 414 0 0 0 chrX 12983910 12983956 -153666340 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 1 684 273 146 0 35 chrX 12983956 12983971 -153666325 - MT2A LTR ERVL -40 544 530 1 684 1099 92 18 0 chrX 12983968 12984132 -153666164 - B2_Mm2 SINE B2 -26 169 3 1 684 504 0 0 0 chrX 12984132 12984188 -153666108 + (TCTA)n Simple_repeat Simple_repeat 1 56 0 1 684 635 224 6 79 chrX 12984189 12984354 -153665942 - MT2A LTR ERVL -71 462 310 1 684 252 212 102 34 chrX 12984415 12984503 -153665793 - ORR1B1-int LTR MaLR -1324 639 546 1 684 2283 186 115 5 chrX 12984573 12985139 -153665157 + RMER19A LTR ERVK 73 737 0 1 684 5066 161 20 15 chrX 12985139 12985206 -153665090 - MERVL_2A-int LTR ERVL -507 5254 5192 1 684 889 126 226 37 chrX 12985206 12985396 -153664900 + URR1A DNA MER1_type 1 226 0 1 684 5066 161 20 15 chrX 12985396 12986174 -153664122 - MERVL_2A-int LTR ERVL -570 5191 4405 1 684 1095 237 59 97 chrX 12986174 12986679 -153663617 - MT2B LTR ERVL 0 601 20 1 684 2053 169 18 32 chrX 12986685 12986716 -153663580 - ORR1B1 LTR MaLR -19 375 356 1 684 3121 101 9 0 chrX 12986716 12987151 -153663145 - Lx LINE L1 0 6654 6216 1 684 2053 169 18 32 chrX 12987151 12987499 -153662797 - ORR1B1 LTR MaLR -39 355 1 1 684 9109 154 44 59 chrX 12987517 12987978 -153662318 - MERVL_2A-int LTR ERVL -1348 4413 3921 1 684 758 225 0 21 chrX 12987978 12988123 -153662173 + B1_Mus1 SINE Alu 1 142 -6 1 684 9109 154 44 59 chrX 12988123 12988284 -153662012 - MERVL_2A-int LTR ERVL -1841 3920 3815 1 684 1901 162 27 99 chrX 12988284 12988687 -153661609 - ORR1C1 LTR MaLR 0 378 5 1 684 9109 154 44 59 chrX 12988687 12989729 -153660567 - MERVL_2A-int LTR ERVL -1947 3814 2772 1 684 1077 83 20 20 chrX 12989729 12989877 -153660419 + B1_Mus1 SINE Alu 1 148 0 1 684 4211 152 88 16 chrX 12989890 12990958 -153659338 - MERVL_2A-int LTR ERVL -3427 2334 1190 1 684 742 152 87 0 chrX 12990991 12991129 -153659167 - B1_Mur4 SINE Alu 0 150 1 1 684 2632 108 26 77 chrX 12991131 12991584 -153658712 - MERVL_2A-int LTR ERVL -4565 1196 767 1 684 1078 220 234 53 chrX 12991596 12992048 -153658248 - RLTR20C LTR ERVK 0 534 1 1 684 497 126 90 22 chrX 12992050 12992139 -153658157 - MERVL_2A-int LTR ERVL -4997 764 670 1 684 1287 109 37 28 chrX 12992144 12992361 -153657935 - URR1B DNA MER1_type -6 219 1 1 684 454 95 0 0 chrX 12992373 12992436 -153657860 - MERVL_2A-int LTR ERVL -5096 665 603 1 684 3504 99 81 8 chrX 12992564 12993085 -153657211 - L1_Mus3 LINE L1 -6 6632 6074 1 684 1355 175 56 4 chrX 12993085 12993337 -153656959 - MERVL_2A-int LTR ERVL -5153 608 344 1 684 2801 153 70 56 chrX 12993337 12994254 -153656042 + RLTR13D1 LTR ERVK 1 893 0 1 684 1726 144 51 17 chrX 12994254 12994550 -153655746 - MERVL_2A-int LTR ERVL -5412 349 44 1 684 1232 139 41 18 chrX 12994554 12994774 -153655522 + RMER1C Other Other 1115 1339 -3 1 684 1197 61 0 0 chrX 12994784 12994932 -153655364 + B1_Mus1 SINE Alu 1 148 0 1 684 372 109 0 0 chrX 12994937 12994992 -153655304 - MERVL_2A-int LTR ERVL -5706 55 1 1 684 1335 186 264 92 chrX 12994992 12995034 -153655262 - MT2A LTR ERVL 0 533 467 1 684 708 12 0 0 chrX 12995034 12995115 -153655181 + (TC)n Simple_repeat Simple_repeat 1 81 0 1 684 1335 186 264 92 chrX 12995115 12995527 -153654769 - MT2A LTR ERVL -67 466 2 1 684 1157 238 111 16 chrX 12995984 12996436 -153653860 + RMER5 LTR ERV1 33 527 -7 1 684 303 262 0 15 chrX 12996441 12996507 -153653789 - ID4_ SINE ID -17 66 2 1 684 9116 109 41 15 chrX 12996536 12998384 -153651912 - Lx4A LINE L1 -2 7056 5136 1 684 2425 65 0 3 chrX 12998384 12998728 -153651568 - L1Md_F2 LINE L1 0 6582 6257 1 684 6872 94 25 21 chrX 12998728 12998999 -153651297 - Lx4A LINE L1 -742 5135 4867 1 684 4150 155 37 92 chrX 12999000 12999939 -153650357 + RMER19B LTR ERVK 1 888 -14 1 684 279 79 0 0 chrX 12999946 12999984 -153650312 - Lx4A LINE L1 -1007 4870 4833 1 684 23077 99 30 11 chrX 13000000 13001316 -153648980 - L1_Mur2 LINE L1 -1085 4792 3420 1 684 2201 108 9 56 chrX 13001316 13001658 -153648638 + ORR1A3 LTR MaLR 1 326 0 2 684 23077 110 25 20 chrX 13001658 13004566 -153645730 - L1_Mur2 LINE L1 -2458 3419 532 1 684 631 168 8 25 chrX 13004613 13004747 -153645549 - B1_Mur3 SINE Alu -1 148 19 3 684 230 228 85 21 chrX 13004753 13004847 -153645449 + Charlie1b DNA MER1_type 384 483 -40 4 684 666 219 25 31 chrX 13004920 13005080 -153645216 + B3 SINE B2 1 159 -57 5 684 227 222 22 0 chrX 13005119 13005164 -153645132 + PB1D7 SINE Alu 69 114 -6 6 684 2620 210 74 139 chrX 13005672 13005930 -153644366 - RLTR25B LTR ERVK 0 1103 864 7 684 429 20 0 0 chrX 13005930 13005980 -153644316 + (TC)n Simple_repeat Simple_repeat 2 51 0 8 684 2620 210 74 139 chrX 13005980 13006120 -153644176 - RLTR25B LTR ERVK -240 863 768 7 684 2591 128 57 42 chrX 13006120 13006595 -153643701 - RLTR45 LTR ERVK 0 482 1 9 684 3414 178 120 11 chrX 13006595 13007375 -153642921 - RLTR25B LTR ERVK -168 860 1 7 684 896 235 8 80 chrX 13007375 13007622 -153642674 + B4A SINE B4 44 272 -20 1 684 323 256 23 23 chrX 13007839 13007927 -153642369 + B1_Mur3 SINE Alu 12 99 -50 1 684 581 186 0 8 chrX 13007953 13008078 -153642218 + GA-rich Low_complexity Low_complexity 3 126 0 1 684 478 256 70 35 chrX 13008096 13008238 -153642058 + B1_Mur1 SINE Alu 3 149 0 1 684 352 228 0 12 chrX 13009529 13009609 -153640687 + ID4_ SINE ID 5 83 0 1 684 414 0 0 0 chrX 13009751 13009797 -153640499 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 1 684 796 178 4 4 chrX 13010405 13010642 -153639654 + CT-rich Low_complexity Low_complexity 1 237 0 1 684 253 62 42 0 chrX 13010866 13010914 -153639382 + (TTG)n Simple_repeat Simple_repeat 1 50 0 1 684 272 311 62 47 chrX 13010984 13011112 -153639184 - B1F SINE Alu -15 134 5 1 684 339 25 0 0 chrX 13011146 13011186 -153639110 + (GGA)n Simple_repeat Simple_repeat 3 42 0 1 684 402 21 0 0 chrX 13011398 13011445 -153638851 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 2 684 571 214 18 48 chrX 13011445 13011612 -153638684 - Lx4B LINE L1 -14 7044 6883 2 684 2361 215 91 39 chrX 13011616 13012289 -153638007 - L1_Mur2 LINE L1 -5788 924 217 2 684 204 218 36 0 chrX 13012484 13012539 -153637757 + T-rich Low_complexity Low_complexity 4 60 0 2 684 357 223 69 13 chrX 13012545 13012638 -153637658 - B3 SINE B2 -79 119 1 2 684 472 221 57 8 chrX 13013041 13013164 -153637132 - B3 SINE B2 -87 129 1 2 684 547 293 39 26 chrX 13013221 13013375 -153636921 - RSINE1 SINE B4 -6 159 4 2 684 729 169 22 7 chrX 13013593 13013730 -153636566 - B1_Mus1 SINE Alu 0 148 10 2 684 339 232 37 83 chrX 13013637 13013745 -153636551 - MT2B LTR ERVL -345 256 154 2 684 2433 181 60 65 chrX 13013819 13014741 -153635555 - RLTR13D1 LTR ERVK 0 855 1 2 684 19158 64 6 3 chrX 13019998 13022824 -153627472 + L1Md_F2 LINE L1 3402 6236 -346 3 684 5445 98 6 20 chrX 13022827 13023623 -153626673 + L1Md_F2 LINE L1 5798 6582 0 3 684 2569 79 43 58 chrX 13028037 13028452 -153621844 - RLTR10A LTR ERVK 0 411 3 3 684 985 366 67 30 chrX 13032703 13033694 -153616602 + MER52-int LTR ERV1 4209 5235 -1856 3 684 2505 110 73 63 chrX 13033773 13034250 -153616046 + RLTR45 LTR ERVK 1 482 0 3 684 666 228 0 0 chrX 13034699 13034857 -153615439 + CT-rich Low_complexity Low_complexity 1 158 0 3 684 227 280 12 96 chrX 13034894 13034977 -153615319 - B1F SINE Alu -71 78 3 3 684 2380 157 172 14 chrX 13035204 13035709 -153614587 + RMER4B LTR ERVK 1 585 0 3 684 505 306 29 106 chrX 13035994 13036239 -153614057 - B4A SINE B4 -24 268 43 3 684 931 145 0 22 chrX 13036386 13036569 -153613727 + GA-rich Low_complexity Low_complexity 2 180 0 3 684 441 90 0 0 chrX 13036559 13036626 -153613670 + (GAGAA)n Simple_repeat Simple_repeat 3 69 0 4 684 233 274 96 0 chrX 13036627 13036700 -153613596 - B1F SINE Alu -52 97 18 4 684 180 0 0 0 chrX 13036940 13036960 -153613336 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 684 568 233 110 55 chrX 13036961 13036993 -153613303 - Lx9 LINE L1 -182 7462 7417 4 684 294 29 0 0 chrX 13036993 13037028 -153613268 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 684 568 233 110 55 chrX 13037028 13037231 -153613065 - Lx9 LINE L1 -228 7416 7214 4 684 621 262 24 12 chrX 13037252 13037418 -153612878 - Lx9 LINE L1 -518 7126 6959 4 684 234 188 0 0 chrX 13039416 13039464 -153610832 + A-rich Low_complexity Low_complexity 1 48 0 4 684 354 45 0 0 chrX 13039650 13039694 -153610602 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 684 425 254 266 40 chrX 13039729 13039955 -153610341 - B4 SINE B4 -13 279 3 4 684 670 264 32 13 chrX 13039998 13040155 -153610141 - RSINE1 SINE B4 -4 161 2 4 684 446 263 172 31 chrX 13040201 13040456 -153609840 + RMER5 LTR ERV1 215 505 -29 4 684 460 274 8 45 chrX 13040714 13040820 -153609476 - MER115 DNA Tip100 -1 692 591 5 684 189 0 0 0 chrX 13040820 13040841 -153609455 + (CTAA)n Simple_repeat Simple_repeat 1 21 0 5 684 460 274 8 45 chrX 13040841 13040868 -153609428 - MER115 DNA Tip100 -103 590 564 5 684 558 41 0 0 chrX 13040871 13040944 -153609352 + (TCTCTG)n Simple_repeat Simple_repeat 6 78 0 5 684 283 267 28 37 chrX 13041360 13041469 -153608827 + LTR16C LTR ERVL 369 476 -13 5 684 394 241 0 33 chrX 13042247 13042337 -153607959 - MTD LTR MaLR -202 217 131 5 684 546 229 30 0 chrX 13042680 13042811 -153607485 + B3A SINE B2 48 182 -16 5 684 2405 103 45 8 chrX 13043408 13043788 -153606508 + ORR1B1 LTR MaLR 1 394 0 5 684 24 0 0 0 chrX 13045540 13045564 -153604732 + AT_rich Low_complexity Low_complexity 1 24 0 5 684 419 238 28 28 chrX 13045597 13045705 -153604591 - ID_B1 SINE B4 -10 214 107 5 684 1090 255 36 118 chrX 13045820 13046260 -153604036 - MTD LTR MaLR -15 404 1 5 684 398 303 167 14 chrX 13047356 13047577 -153602719 + L1ME1 LINE L1 5423 5677 -487 6 684 521 129 0 11 chrX 13047590 13047684 -153602612 + (GA)n Simple_repeat Simple_repeat 2 94 0 6 684 270 275 227 21 chrX 13048017 13048255 -153602041 + L1ME1 LINE L1 5844 6130 -49 6 684 266 304 139 0 chrX 13048263 13048342 -153601954 - ID_B1 SINE B4 -123 101 12 5 684 263 314 29 36 chrX 13048506 13048645 -153601651 - L1M5 LINE L1 -305 5859 5722 6 684 544 252 0 48 chrX 13048937 13049083 -153601213 + ID_B1 SINE B4 82 220 -4 6 684 1077 188 45 0 chrX 13049125 13049327 -153600969 + B3 SINE B2 5 215 -1 6 684 21 71 0 0 chrX 13049472 13049514 -153600782 + AT_rich Low_complexity Low_complexity 1 42 0 6 684 588 207 302 13 chrX 13050143 13050378 -153599918 - L1MB5 LINE L1 -6 6168 5866 6 684 343 276 0 0 chrX 13050378 13050454 -153599842 - ID2 SINE ID 0 83 8 6 684 852 147 14 27 chrX 13050495 13050642 -153599654 - B1_Mm SINE Alu 0 147 3 6 684 289 273 117 39 chrX 13050657 13050760 -153599536 - PB1D10 SINE Alu -6 111 1 6 684 257 259 47 0 chrX 13050823 13050908 -153599388 - Lx4A LINE L1 -1302 5756 5668 7 684 597 136 0 31 chrX 13050926 13051055 -153599241 + CT-rich Low_complexity Low_complexity 1 125 0 7 684 867 108 0 23 chrX 13051055 13051188 -153599108 - B1_Mus1 SINE Alu -6 142 13 7 684 530 261 0 0 chrX 13051265 13051376 -153598920 - PB1D10 SINE Alu -6 111 1 7 684 746 246 107 41 chrX 13051477 13051748 -153598548 - B4 SINE B4 0 292 4 7 684 548 239 104 0 chrX 13051783 13051917 -153598379 + B1F SINE Alu 2 149 0 7 684 272 225 0 40 chrX 13051973 13052047 -153598249 + ID4_ SINE ID 2 72 -11 7 684 297 0 0 0 chrX 13052427 13052460 -153597836 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 684 311 281 79 47 chrX 13052477 13052604 -153597692 - ORR1E LTR MaLR -210 149 19 7 684 1435 255 81 3 chrX 13052852 13053198 -153597098 + Lx6 LINE L1 7041 7413 -47 7 684 904 103 20 0 chrX 13054082 13054228 -153596068 + (TTTC)n Simple_repeat Simple_repeat 4 152 0 8 684 1121 44 0 0 chrX 13054228 13054363 -153595933 - B1_Mus2 SINE Alu -12 135 1 8 684 796 236 0 0 chrX 13054501 13054649 -153595647 + RSINE1 SINE B4 1 148 -17 8 684 369 0 0 0 chrX 13054655 13054696 -153595600 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 684 333 0 0 0 chrX 13054696 13054732 -153595564 + (GA)n Simple_repeat Simple_repeat 2 38 0 8 684 231 307 48 19 chrX 13055016 13055119 -153595177 - MLT1N2 LTR MaLR -358 204 99 8 684 289 257 33 66 chrX 13055326 13055447 -153594849 + MLT1A0 LTR MaLR 5 121 -244 8 684 454 130 89 10 chrX 13055455 13055556 -153594740 - PB1D9 SINE Alu -4 116 8 8 684 378 260 97 52 chrX 13055590 13055724 -153594572 + MLT1A0 LTR MaLR 218 357 -8 8 684 547 271 43 12 chrX 13055811 13055972 -153594324 - ID_B1 SINE B4 -1 223 58 8 684 482 280 9 0 chrX 13056469 13056576 -153593720 + PB1D10 SINE Alu 1 108 -9 8 684 256 98 157 0 chrX 13056910 13056961 -153593335 + L1_Mur2 LINE L1 209 267 -6445 9 684 3248 101 55 101 chrX 13056953 13057538 -153592758 + Lx4A LINE L1 6501 7058 0 9 684 736 197 44 0 chrX 13057556 13057693 -153592603 + B1_Mur1 SINE Alu 2 144 -5 9 684 390 316 51 5 chrX 13058251 13058448 -153591848 - L1MEc LINE L1 -4370 2030 1825 9 684 632 236 27 14 chrX 13058587 13058733 -153591563 + B4A SINE B4 2 149 -143 9 684 1384 108 0 5 chrX 13058923 13059118 -153591178 - B2_Mm2 SINE B2 0 195 2 9 684 21 36 0 0 chrX 13059240 13059268 -153591028 + AT_rich Low_complexity Low_complexity 1 28 0 9 684 307 182 18 0 chrX 13059506 13059561 -153590735 + B1_Mus2 SINE Alu 81 136 -11 9 684 229 121 0 0 chrX 13059732 13059765 -153590531 - B3A SINE B2 -82 116 84 9 684 194 279 16 16 chrX 13059850 13059912 -153590384 - L2b LINE L2 -1 3374 3313 9 684 387 197 0 32 chrX 13060610 13060736 -153589560 + CT-rich Low_complexity Low_complexity 2 123 0 1 684 1101 205 15 0 chrX 13060736 13060941 -153589355 - ID_B1 SINE B4 -16 208 1 1 684 423 0 0 0 chrX 13061036 13061083 -153589213 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1 684 1137 69 0 0 chrX 13061083 13061228 -153589068 - B1_Mus2 SINE Alu -2 145 1 1 684 579 277 22 30 chrX 13061456 13061590 -153588706 + RSINE1 SINE B4 5 137 -28 1 684 275 258 124 0 chrX 13062309 13062406 -153587890 - MER33 DNA MER1_type -206 118 10 1 684 279 0 0 0 chrX 13062651 13062682 -153587614 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 684 252 216 0 0 chrX 13064976 13065013 -153585283 - ETnERV2-int LTR ERVK -193 7213 7177 1 684 761 245 13 19 chrX 13065064 13065222 -153585074 - ETnERV2-int LTR ERVK -180 7226 7070 1 684 295 235 82 109 chrX 13065611 13065721 -153584575 + MER103 DNA DNA 20 126 -40 1 684 279 247 0 12 chrX 13066151 13066233 -153584063 + ID4_ SINE ID 2 82 -1 1 684 332 207 77 44 chrX 13066584 13066675 -153583621 - PB1D7 SINE Alu -3 117 24 1 684 265 269 90 0 chrX 13066740 13066807 -153583489 + ID4_ SINE ID 1 73 -10 1 684 626 246 7 37 chrX 13067040 13067175 -153583121 - RSINE1 SINE B4 -32 133 3 1 684 598 258 0 55 chrX 13068309 13068473 -153581823 + B4A SINE B4 1 155 -137 1 684 330 208 86 38 chrX 13068524 13068629 -153581667 - L1MC4 LINE L1 -191 7851 7742 1 684 816 191 93 47 chrX 13068642 13068856 -153581440 + ID_B1 SINE B4 1 224 0 1 684 336 243 43 0 chrX 13068868 13068938 -153581358 + ID4_ SINE ID 2 74 -9 1 684 368 328 73 85 chrX 13070095 13070355 -153579941 - MLT1I LTR MaLR 0 411 155 1 684 3162 157 47 11 chrX 13070369 13070924 -153579372 - RMER15 LTR ERVL 0 575 1 1 684 2074 174 61 91 chrX 13071222 13071716 -153578580 - RLTR28B LTR ERVL -2 479 1 1 684 374 193 112 11 chrX 13071716 13071803 -153578493 + PB1D10 SINE Alu 22 117 0 1 684 282 256 11 22 chrX 13071803 13071895 -153578401 + Lx8 LINE L1 7383 7473 0 1 684 180 0 0 0 chrX 13071980 13072000 -153578296 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 684 387 0 0 0 chrX 13072000 13072042 -153578254 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 684 667 186 68 0 chrX 13072042 13072160 -153578136 + B1_Mur1 SINE Alu 23 148 -1 1 684 316 234 31 0 chrX 13072169 13072233 -153578063 + BC1_Mm scRNA scRNA 15 80 -72 1 684 196 28 26 53 chrX 13073156 13073194 -153577102 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 1 684 418 235 0 0 chrX 13073355 13073436 -153576860 - ID4_ SINE ID -1 82 2 1 684 499 195 4 50 chrX 13073954 13074078 -153576218 - B1F SINE Alu -2 118 1 1 684 291 220 34 0 chrX 13074153 13074212 -153576084 + ID4_ SINE ID 12 72 -11 1 684 281 232 28 42 chrX 13074212 13074224 -153576072 + tRNA-Ala-GCY_ tRNA tRNA 6 75 0 1 684 1388 211 154 12 chrX 13074227 13074558 -153575738 - MTE2a LTR MaLR 0 379 2 1 684 542 161 180 31 chrX 13074653 13074781 -153575515 - B1_Mus2 SINE Alu 0 147 1 1 684 674 83 0 60 chrX 13075376 13075492 -153574804 - L1_Mus1 LINE L1 0 6567 6459 1 684 455 88 0 0 chrX 13075492 13075549 -153574747 + L1_Mus1 LINE L1 6139 6195 -372 1 684 634 238 81 47 chrX 13075555 13075727 -153574569 - MIRc SINE MIR -77 191 14 1 684 935 78 15 23 chrX 13075852 13075984 -153574312 + B1_Mus1 SINE Alu 1 131 -17 1 684 342 324 18 68 chrX 13076017 13076212 -153574084 - ORR1E LTR MaLR -32 347 152 1 684 1854 184 103 81 chrX 13076212 13076728 -153573568 + RLTR11A LTR ERVK 2 528 0 1 684 423 274 8 50 chrX 13076728 13076800 -153573496 - ORR1E LTR MaLR -194 165 97 1 684 1168 102 210 0 chrX 13076800 13076986 -153573310 + URR1A DNA MER1_type 1 225 -1 1 684 423 274 8 50 chrX 13076986 13077032 -153573264 - ORR1E LTR MaLR -263 96 52 1 684 418 237 278 70 chrX 13077070 13077291 -153573005 + L1MD LINE L1 4922 5201 -945 1 684 706 240 57 19 chrX 13077291 13077448 -153572848 + RSINE1 SINE B4 1 163 -2 1 684 765 257 183 31 chrX 13077448 13077927 -153572369 + L1MD LINE L1 5202 5759 -600 1 684 335 277 11 11 chrX 13078018 13078113 -153572183 - Lx8 LINE L1 -2 7471 7377 1 684 1905 200 87 18 chrX 13078117 13078509 -153571787 - MTD LTR MaLR 0 419 1 1 684 451 211 201 14 chrX 13078509 13078653 -153571643 - Lx8 LINE L1 -159 7314 7144 1 684 248 268 57 21 chrX 13078744 13078885 -153571411 - L1_Mur3 LINE L1 -400 5900 5755 1 684 297 315 69 14 chrX 13079223 13079368 -153570928 + RMER15 LTR ERVL 405 557 -18 1 684 597 240 121 39 chrX 13079450 13079696 -153570600 - L1_Mur3 LINE L1 -672 5625 5313 1 684 224 353 0 0 chrX 13079701 13079769 -153570527 - PB1D10 SINE Alu -8 109 42 1 684 405 0 0 0 chrX 13079790 13079835 -153570461 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 684 736 273 106 72 chrX 13080364 13080617 -153569679 + L1MA8 LINE L1 5882 6172 -119 1 684 1024 182 70 10 chrX 13080617 13080817 -153569479 + B3 SINE B2 1 212 -4 1 684 736 273 106 72 chrX 13080817 13080950 -153569346 + L1MA8 LINE L1 6173 6281 -10 1 684 324 315 126 37 chrX 13081139 13081274 -153569022 - MLT1J LTR MaLR -170 342 196 1 684 674 191 86 22 chrX 13081274 13081413 -153568883 + B1_Mur2 SINE Alu 2 149 0 1 684 1310 286 35 13 chrX 13081449 13081825 -153568471 + Lx8 LINE L1 6233 6616 -857 1 684 1608 253 204 56 chrX 13081837 13082225 -153568071 + Lx8 LINE L1 6674 7120 -353 1 684 1162 37 0 0 chrX 13082225 13082361 -153567935 + B1_Mus1 SINE Alu 2 137 -11 1 684 333 0 0 0 chrX 13082364 13082401 -153567895 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 684 1608 253 204 56 chrX 13082401 13082703 -153567593 + Lx8 LINE L1 7121 7469 -4 1 684 343 240 180 8 chrX 13083029 13083151 -153567145 + B4A SINE B4 2 144 -148 1 684 465 296 55 35 chrX 13083186 13083454 -153566842 + RSINE1 SINE B4 3 290 -2 1 684 450 0 0 0 chrX 13083464 13083514 -153566782 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 684 264 30 0 0 chrX 13083852 13083885 -153566411 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 684 510 264 0 148 chrX 13083895 13084091 -153566205 - B4 SINE B4 -41 251 85 1 684 187 329 15 55 chrX 13084172 13084265 -153566031 + MIRb SINE MIR 119 212 -50 1 684 957 188 11 28 chrX 13084356 13084537 -153565759 - RMER15 LTR ERVL -119 456 279 1 684 318 224 0 0 chrX 13084556 13084641 -153565655 + CT-rich Low_complexity Low_complexity 3 87 0 1 684 402 287 9 27 chrX 13084642 13084753 -153565543 - PB1D10 SINE Alu 0 117 9 1 684 722 215 43 14 chrX 13084815 13084971 -153565325 - RSINE1 SINE B4 -1 164 4 1 684 530 256 173 5 chrX 13084976 13085196 -153565100 - L1MA5 LINE L1 -2 6289 6041 1 684 236 241 0 0 chrX 13085263 13085321 -153564975 - L1M5 LINE L1 -2168 3978 3921 1 684 528 222 127 0 chrX 13085575 13085701 -153564595 + B1F SINE Alu 2 143 -6 1 684 646 232 80 45 chrX 13085713 13085889 -153564407 + B3A SINE B2 1 182 -16 1 684 847 154 7 35 chrX 13085961 13086102 -153564194 - B1_Mur3 SINE Alu -8 141 5 1 684 920 160 0 34 chrX 13086116 13086265 -153564031 - B1_Mur4 SINE Alu -1 149 6 1 684 203 79 26 0 chrX 13086270 13086308 -153563988 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 684 1393 282 26 22 chrX 13086342 13086758 -153563538 - Lx9 LINE L1 -704 6940 6523 1 684 947 255 7 50 chrX 13086757 13087038 -153563258 + Lx9 LINE L1 6983 7251 -393 1 684 335 165 141 20 chrX 13087036 13087135 -153563161 + Lx9 LINE L1 6886 6996 -648 1 684 486 0 0 0 chrX 13087159 13087213 -153563083 + (TTTTC)n Simple_repeat Simple_repeat 2 55 0 1 684 898 134 0 53 chrX 13087214 13087364 -153562932 + B1_Mur4 SINE Alu 2 143 -7 1 684 364 311 17 0 chrX 13087424 13087549 -153562747 + Lx9 LINE L1 7307 7418 -226 1 684 543 16 0 0 chrX 13087942 13088006 -153562290 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 684 436 96 53 0 chrX 13088006 13088100 -153562196 + (CAGAGA)n Simple_repeat Simple_repeat 4 102 0 1 684 370 241 34 43 chrX 13088104 13088221 -153562075 - RSINE1 SINE B4 -47 118 3 1 684 400 278 71 16 chrX 13088535 13088771 -153561525 + ORR1E LTR MaLR 53 377 -2 1 684 434 279 66 0 chrX 13088883 13089005 -153561291 - MER54A LTR ERVL -771 130 1 1 684 261 0 0 0 chrX 13089021 13089050 -153561246 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 684 1161 44 0 0 chrX 13089055 13089192 -153561104 - B1_Mus1 SINE Alu -11 137 1 1 684 429 20 0 0 chrX 13089331 13089381 -153560915 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 1 684 674 328 5 39 chrX 13089382 13089588 -153560708 - B4A SINE B4 -78 214 16 1 684 2463 176 27 5 chrX 13089660 13090235 -153560061 - Lx9 LINE L1 -8 7636 6988 1 684 261 300 0 0 chrX 13090247 13090297 -153559999 + ID4 SINE ID 34 83 0 1 684 285 264 149 0 chrX 13090778 13090865 -153559431 - ID_B1 SINE B4 -1 223 124 1 684 243 0 0 0 chrX 13091328 13091355 -153558941 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 684 328 291 125 6 chrX 13091454 13091630 -153558666 - L1MEg LINE L1 -4307 1777 1581 1 684 632 233 9 0 chrX 13091676 13091792 -153558504 - RSINE1 SINE B4 -47 118 2 1 684 886 256 35 43 chrX 13092168 13092425 -153557871 - B4A SINE B4 -1 291 37 1 684 231 36 0 0 chrX 13093183 13093211 -153557085 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 684 1007 226 45 15 chrX 13093217 13093482 -153556814 - B4A SINE B4 -19 273 1 1 684 354 23 0 0 chrX 13096063 13096106 -153554190 + (A)n Simple_repeat Simple_repeat 1 43 0 1 684 360 0 0 0 chrX 13096699 13096739 -153553557 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 684 522 283 35 0 chrX 13100367 13100480 -153549816 - PB1D10 SINE Alu 0 117 1 1 684 1242 54 0 0 chrX 13100572 13100719 -153549577 - B1_Mus1 SINE Alu 0 148 2 1 684 201 303 161 27 chrX 13100880 13101029 -153549267 + L2a LINE L2 3253 3421 -5 1 684 321 224 109 109 chrX 13102006 13102236 -153548060 + L1M2 LINE L1 5109 5338 -805 1 684 251 241 0 18 chrX 13102516 13102571 -153547725 - ID4 SINE ID 0 83 30 2 684 330 283 54 0 chrX 13104679 13104771 -153545525 - PB1D10 SINE Alu -8 109 13 2 684 682 271 66 0 chrX 13104704 13104855 -153545441 - ID_B1 SINE B4 -63 161 1 2 684 206 77 103 0 chrX 13105586 13105625 -153544671 + (TCTCTG)n Simple_repeat Simple_repeat 3 45 0 2 684 198 328 40 40 chrX 13105770 13105894 -153544402 + L4 LINE RTE 1416 1539 -490 2 684 230 325 104 16 chrX 13106012 13106137 -153544159 + L4 LINE RTE 1811 1946 -83 2 684 324 245 0 50 chrX 13106448 13106547 -153543749 + GA-rich Low_complexity Low_complexity 3 96 0 2 684 459 0 0 0 chrX 13106550 13106601 -153543695 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 85 301 333 0 10 chrX 13107196 13107296 -153543000 - PB1D10 SINE Alu -17 100 2 2 685 261 79 0 0 chrX 13108827 13108845 -153541451 + (CAG)n Simple_repeat Simple_repeat 2 19 0 2 685 237 108 0 0 chrX 13108845 13108882 -153541414 + (TGG)n Simple_repeat Simple_repeat 2 38 0 2 685 261 79 0 0 chrX 13108882 13108901 -153541395 + (CAG)n Simple_repeat Simple_repeat 2 20 0 2 685 224 173 132 19 chrX 13109943 13109996 -153540300 + MIR SINE MIR 20 78 -130 2 685 326 23 0 23 chrX 13110749 13110793 -153539503 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 685 251 311 0 32 chrX 13110804 13110867 -153539429 - ID4_ SINE ID -22 61 1 2 685 385 269 39 0 chrX 13110905 13111009 -153539287 + PB1D10 SINE Alu 10 117 0 2 685 2543 62 3 63 chrX 13111085 13111447 -153538849 - L1_Mus2 LINE L1 0 6566 6227 2 685 1302 223 139 3 chrX 13111584 13111908 -153538388 + ORR1D2 LTR MaLR 1 368 -2 2 685 411 268 134 0 chrX 13111971 13112113 -153538183 - MER3 DNA MER1_type -9 200 40 2 685 234 0 0 0 chrX 13112291 13112317 -153537979 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 685 683 263 0 0 chrX 13112317 13112454 -153537842 - B1F1 SINE Alu -9 140 4 2 685 1123 215 9 0 chrX 13112481 13112695 -153537601 - B3 SINE B2 0 216 1 2 685 401 345 0 0 chrX 13112705 13112821 -153537475 + MER58A DNA MER1_type 65 180 -44 2 685 240 284 14 43 chrX 13112913 13112983 -153537313 + ORR1D2 LTR MaLR 1 68 -291 2 685 285 325 80 124 chrX 13113038 13113312 -153536984 + ORR1D2 LTR MaLR 54 315 -55 2 685 222 320 0 0 chrX 13113313 13113388 -153536908 + CT-rich Low_complexity Low_complexity 3 77 0 2 685 456 231 17 8 chrX 13113893 13114011 -153536285 - PB1D9 SINE Alu -1 119 1 2 685 222 150 0 0 chrX 13116867 13116907 -153533389 + (CAAAA)n Simple_repeat Simple_repeat 3 42 0 2 685 243 275 68 68 chrX 13117361 13117478 -153532818 - ID4_ SINE ID -30 122 6 2 685 416 200 13 0 chrX 13119971 13120046 -153530250 - ID4_ SINE ID -4 79 4 2 685 1605 21 16 0 chrX 13120827 13121016 -153529280 - B2_Mm1t SINE B2 0 193 2 2 685 195 42 0 0 chrX 13121765 13121789 -153528507 + (GGAA)n Simple_repeat Simple_repeat 3 26 0 2 685 250 275 99 0 chrX 13122494 13122585 -153527711 - L1M5 LINE L1 -1406 4740 4641 2 685 366 107 0 0 chrX 13122591 13122647 -153527649 + (TATG)n Simple_repeat Simple_repeat 1 56 0 2 685 721 261 79 48 chrX 13122663 13122892 -153527404 - B4A SINE B4 -56 236 1 2 685 4709 55 0 0 chrX 13122944 13123524 -153526772 - L1Md_F2 LINE L1 -12 6570 5991 2 685 549 279 22 0 chrX 13123635 13123771 -153526525 - ID_B1 SINE B4 0 224 86 2 685 552 254 183 5 chrX 13123778 13123964 -153526332 - ID_B1 SINE B4 -3 221 3 2 685 398 296 42 7 chrX 13124023 13124166 -153526130 - B1F2 SINE Alu -1 148 1 2 685 552 223 92 8 chrX 13124254 13124385 -153525911 - B1F SINE Alu -6 143 2 2 685 189 0 0 0 chrX 13124643 13124664 -153525632 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2 685 421 201 295 23 chrX 13124871 13125044 -153525252 - ID_B1 SINE B4 -3 221 2 2 685 355 256 51 0 chrX 13131142 13131220 -153519076 - ID4_ SINE ID 0 83 2 2 685 253 268 21 104 chrX 13133123 13133219 -153517077 - B3A SINE B2 -17 199 112 2 685 971 252 96 11 chrX 13133172 13133433 -153516863 - B4A SINE B4 -4 288 6 2 685 917 238 109 17 chrX 13133514 13133864 -153516432 + Lx9 LINE L1 7259 7640 -4 2 685 616 253 26 39 chrX 13133877 13134033 -153516263 + RSINE1 SINE B4 12 165 0 2 685 22 0 0 0 chrX 13134033 13134055 -153516241 + AT_rich Low_complexity Low_complexity 1 22 0 2 685 573 297 119 47 chrX 13134466 13134809 -153515487 + L1MEg LINE L1 918 1285 -4957 2 685 575 328 22 0 chrX 13134835 13134969 -153515327 + RSINE1 SINE B4 15 151 -14 2 685 1152 62 0 0 chrX 13135027 13135171 -153515125 + B1_Mus1 SINE Alu 5 148 0 2 685 186 71 0 0 chrX 13135173 13135201 -153515095 + (A)n Simple_repeat Simple_repeat 1 28 0 2 685 568 255 0 0 chrX 13135389 13135495 -153514801 + ID_B1 SINE B4 80 185 -39 2 685 329 320 87 28 chrX 13135604 13135858 -153514438 + L1MEg LINE L1 2576 2844 -3302 2 685 305 100 0 16 chrX 13135862 13135923 -153514373 + L1Md_F3 LINE L1 6522 6581 -3 2 685 1329 25 0 6 chrX 13135944 13136106 -153514190 + B2_Mm2 SINE B2 2 162 -33 2 685 324 0 0 0 chrX 13136106 13136142 -153514154 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 2 685 304 222 67 25 chrX 13136159 13136279 -153514017 + L1MEg LINE L1 2875 2999 -3147 2 685 21 36 0 0 chrX 13136724 13136752 -153513544 + AT_rich Low_complexity Low_complexity 1 28 0 2 685 687 201 52 7 chrX 13136963 13137098 -153513198 - B1_Mus1 SINE Alu -1 147 7 2 685 639 220 76 0 chrX 13137625 13137757 -153512539 - ID_B1 SINE B4 -3 221 80 2 685 1104 88 0 0 chrX 13138393 13138541 -153511755 - B1_Mus1 SINE Alu 0 148 1 2 685 746 229 6 82 chrX 13139547 13139718 -153510578 - RSINE1 SINE B4 0 165 8 2 685 536 232 217 17 chrX 13139786 13139966 -153510330 - ID_B1 SINE B4 -7 217 2 2 685 241 291 9 80 chrX 13140365 13140477 -153509819 + MT2B LTR ERVL 163 266 -335 2 685 623 168 19 0 chrX 13140402 13140509 -153509787 + B1_Mur4 SINE Alu 42 150 0 2 685 308 301 0 0 chrX 13141913 13141986 -153508310 - B1F1 SINE Alu -8 141 69 2 685 248 327 0 0 chrX 13142220 13142272 -153508024 - B1F1 SINE Alu -95 54 3 2 685 395 285 40 24 chrX 13142727 13142853 -153507443 + L2a LINE L2 3298 3425 -1 2 685 270 0 0 0 chrX 13142926 13142956 -153507340 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 685 644 283 43 0 chrX 13143880 13144067 -153506229 - B3A SINE B2 -2 196 2 2 685 419 287 75 0 chrX 13144236 13144330 -153505966 + RSINE1 SINE B4 50 150 -15 2 685 1346 66 22 16 chrX 13144851 13145036 -153505260 - B2_Mm2 SINE B2 -8 187 2 2 685 321 271 104 0 chrX 13145084 13145180 -153505116 + PB1D9 SINE Alu 8 113 -7 2 685 278 26 26 0 chrX 13146708 13146747 -153503549 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 685 21 0 0 0 chrX 13147431 13147452 -153502844 + AT_rich Low_complexity Low_complexity 1 21 0 2 685 453 19 0 0 chrX 13149321 13149375 -153500921 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 2 685 516 237 6 156 chrX 13149467 13149627 -153500669 - B1_Mur1 SINE Alu -13 136 1 2 685 24 0 0 0 chrX 13149743 13149767 -153500529 + AT_rich Low_complexity Low_complexity 1 24 0 2 685 1451 88 0 5 chrX 13149856 13150050 -153500246 - B2_Mm2 SINE B2 -2 193 1 2 685 514 276 81 0 chrX 13150094 13150217 -153500079 + RSINE1 SINE B4 4 136 -29 2 685 522 250 39 7 chrX 13150265 13150418 -153499878 + Lx6 LINE L1 7299 7456 -4 2 685 372 316 38 19 chrX 13150787 13150945 -153499351 - MIR SINE MIR -14 248 88 2 685 216 250 0 0 chrX 13151092 13151156 -153499140 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 685 308 394 77 29 chrX 13151983 13152153 -153498143 + LTR78 LTR ERV1 457 634 -670 2 685 631 347 56 47 chrX 13152715 13153057 -153497239 + ORR1E LTR MaLR 4 348 -11 2 685 517 286 119 6 chrX 13153388 13153564 -153496732 - MER58A DNA MER1_type -28 196 1 2 685 369 0 0 0 chrX 13153797 13153838 -153496458 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 685 2886 155 21 14 chrX 13155232 13155794 -153494502 - Lx3C LINE L1 -616 6360 5795 2 685 3459 137 50 23 chrX 13155794 13156394 -153493902 + Lx3C LINE L1 6358 6973 -3 2 685 181 180 40 0 chrX 13156541 13156591 -153493705 + CT-rich Low_complexity Low_complexity 1 52 0 2 685 792 264 5 133 chrX 13156596 13156784 -153493512 - B3A SINE B2 -31 164 1 2 685 504 191 58 22 chrX 13157378 13157517 -153492779 + L1MB3 LINE L1 5765 5908 -275 2 685 546 342 12 69 chrX 13157517 13157690 -153492606 + RSINE1 SINE B4 3 165 0 2 685 226 204 0 0 chrX 13157690 13157734 -153492562 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 685 431 272 119 13 chrX 13157746 13157973 -153492323 + L1MB3 LINE L1 5894 6144 -39 2 685 6949 53 46 1 chrX 13157995 13159163 -153491133 + L1_Mus1 LINE L1 5345 6565 -2 2 685 489 264 58 117 chrX 13159188 13159325 -153490971 + B3A SINE B2 67 195 0 2 685 216 0 0 0 chrX 13159541 13159565 -153490731 + (TTATA)n Simple_repeat Simple_repeat 5 28 0 2 685 638 278 58 11 chrX 13159718 13159907 -153490389 - ID_B1 SINE B4 -3 221 24 2 685 1062 261 111 56 chrX 13160067 13160570 -153489726 + MT2A LTR ERVL 1 531 -2 2 685 225 342 13 0 chrX 13160693 13160769 -153489527 + ID2 SINE ID 5 81 -2 2 685 473 289 91 5 chrX 13160818 13161037 -153489259 - L1M4 LINE L1 -1134 5012 4775 2 685 331 250 24 12 chrX 13161185 13161270 -153489026 - PB1D10 SINE Alu -6 111 26 2 685 381 245 0 0 chrX 13161256 13161328 -153488968 - ID2 SINE ID -78 74 3 2 685 2009 106 73 0 chrX 13161405 13161735 -153488561 + Lx3_Mus LINE L1 5832 6185 -824 2 685 4310 68 42 5 chrX 13161735 13162197 -153488099 + Lx3_Mus LINE L1 6409 6874 -135 2 685 189 0 0 0 chrX 13162197 13162218 -153488078 + (TGGGGG)n Simple_repeat Simple_repeat 3 23 0 2 685 4310 68 42 5 chrX 13162218 13162332 -153487964 + Lx3_Mus LINE L1 6875 7006 -3 2 685 491 265 31 0 chrX 13162349 13162447 -153487849 - RSINE1 SINE B4 -62 103 3 3 685 576 297 51 0 chrX 13162462 13162600 -153487696 - B3A SINE B2 -26 172 28 3 685 668 316 57 14 chrX 13162682 13162894 -153487402 + B4A SINE B4 1 221 -71 3 685 799 207 14 0 chrX 13163267 13163412 -153486884 - B1_Mur2 SINE Alu -2 147 1 3 685 1320 47 0 12 chrX 13164338 13164509 -153485787 + B2_Mm2 SINE B2 2 170 -25 3 685 538 278 45 50 chrX 13165162 13165382 -153484914 + MER20 DNA MER1_type 1 219 0 3 685 331 342 84 0 chrX 13165468 13165623 -153484673 + L1ME4a LINE L1 5539 5706 -418 3 685 469 352 40 16 chrX 13165644 13165895 -153484401 + L1ME4a LINE L1 5757 6013 -111 3 685 728 250 135 102 chrX 13166082 13166541 -153483755 - L1MD1 LINE L1 -16 6226 5753 3 685 238 0 0 75 chrX 13166740 13166780 -153483516 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 3 685 238 131 0 0 chrX 13167601 13167642 -153482654 - ID4_ SINE ID -64 88 48 3 685 207 0 0 0 chrX 13167651 13167674 -153482622 + (TCCC)n Simple_repeat Simple_repeat 1 23 0 3 685 842 189 6 0 chrX 13167674 13167849 -153482447 + CT-rich Low_complexity Low_complexity 2 177 0 3 685 329 141 0 101 chrX 13167859 13167938 -153482358 - PB1D9 SINE Alu -7 113 43 3 685 4109 81 9 2 chrX 13168125 13168671 -153481625 + L1_Mus1 LINE L1 6018 6567 0 3 685 312 94 0 0 chrX 13168759 13168812 -153481484 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 685 416 309 0 0 chrX 13169153 13169263 -153481033 - PB1D10 SINE Alu -5 112 3 3 685 256 280 140 59 chrX 13169332 13169518 -153480778 - MIRc SINE MIR -63 205 5 3 685 784 154 80 7 chrX 13169658 13169795 -153480501 - B1_Mus1 SINE Alu -1 147 1 3 685 467 288 85 34 chrX 13169807 13169983 -153480313 - B3A SINE B2 -12 186 2 3 685 327 250 209 29 chrX 13170513 13170719 -153479577 - L1ME2z LINE L1 -103 6341 6099 3 685 415 284 9 18 chrX 13170864 13170975 -153479321 - PB1D10 SINE Alu -6 111 2 3 685 705 180 22 36 chrX 13171007 13171145 -153479151 + B1_Mur1 SINE Alu 3 138 -11 3 685 707 177 18 11 chrX 13171600 13171738 -153478558 - B1_Mur2 SINE Alu 0 149 7 3 685 367 304 20 80 chrX 13171640 13171790 -153478506 - MT2B LTR ERVL -344 257 117 3 685 1750 94 0 0 chrX 13172257 13172490 -153477806 + Lx2 LINE L1 6412 6644 -353 3 685 1385 87 73 0 chrX 13172494 13172700 -153477596 + Lx LINE L1 6427 6647 -7 3 685 333 0 0 0 chrX 13173042 13173079 -153477217 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 685 341 330 9 35 chrX 13173210 13173323 -153476973 - PB1D10 SINE Alu -6 111 2 3 685 243 360 8 58 chrX 13173226 13173347 -153476949 - ID_B1 SINE B4 -48 176 62 3 685 455 189 126 0 chrX 13174540 13174651 -153475645 + MTD LTR MaLR 295 419 0 3 685 3130 58 0 14 chrX 13175435 13175853 -153474443 + L1Md_F2 LINE L1 6170 6581 -1 3 685 23 0 0 0 chrX 13175876 13175899 -153474397 + AT_rich Low_complexity Low_complexity 1 23 0 3 685 571 291 17 23 chrX 13178115 13178271 -153472025 - ID_B1 SINE B4 -4 220 68 3 685 801 237 41 117 chrX 13178532 13178848 -153471448 - B4A SINE B4 0 292 1 3 685 389 186 0 0 chrX 13179300 13179370 -153470926 + PB1D10 SINE Alu 45 114 -3 3 685 183 360 0 48 chrX 13179943 13180048 -153470248 - MIR3 SINE MIR -7 201 102 3 685 723 264 47 47 chrX 13180142 13180353 -153469943 - MER58A DNA MER1_type -12 212 2 3 685 828 301 89 19 chrX 13180700 13181069 -153469227 - Lx8 LINE L1 -1 7472 7078 3 685 267 258 16 0 chrX 13181483 13181545 -153468751 + MER34A LTR ERV1 1 63 -508 3 685 1013 228 160 24 chrX 13181787 13182119 -153468177 + MTEa LTR MaLR 3 379 0 3 685 345 271 179 27 chrX 13182215 13182356 -153467940 - L1M4 LINE L1 -1660 4486 4333 3 685 437 34 17 0 chrX 13182356 13182415 -153467881 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 685 345 271 179 27 chrX 13182415 13182535 -153467761 - L1M4 LINE L1 -1814 4332 4185 3 685 275 233 41 0 chrX 13182570 13182643 -153467653 - MER5A1 DNA MER1_type -87 79 4 3 685 296 309 0 11 chrX 13182650 13182745 -153467551 + MER44D DNA MER2_type 23 116 -589 3 685 230 308 98 0 chrX 13182782 13182915 -153467381 + MER44D DNA MER2_type 532 677 -28 3 685 255 325 54 31 chrX 13183429 13183559 -153466737 - MIR SINE MIR -20 242 110 3 685 540 297 76 11 chrX 13184621 13184805 -153465491 + MER3 DNA MER1_type 8 203 -6 3 685 485 249 20 2 chrX 13185435 13185543 -153464753 - PB1D10 SINE Alu -8 109 3 3 685 243 345 33 33 chrX 13185463 13185553 -153464743 - B4A SINE B4 -125 167 78 3 685 1061 278 55 17 chrX 13186577 13187053 -153463243 + L1_Mur3 LINE L1 4907 5400 -480 3 685 707 281 63 95 chrX 13187219 13187456 -153462840 - L1MC LINE L1 -476 5703 5470 3 685 527 192 384 0 chrX 13187456 13187607 -153462689 - B3 SINE B2 -6 210 2 3 685 707 281 63 94 chrX 13187607 13187820 -153462476 - L1MC LINE L1 -710 5469 5264 3 685 1185 46 0 0 chrX 13187820 13187972 -153462324 + L1Md_A LINE L1 6430 6581 -1 3 685 374 287 68 80 chrX 13187972 13188091 -153462205 - L1MC LINE L1 -883 5263 5157 3 685 180 309 148 0 chrX 13188095 13188244 -153462052 - L2 LINE L2 -773 2646 2476 3 685 212 139 47 0 chrX 13188566 13188609 -153461687 + T-rich Low_complexity Low_complexity 2 46 0 3 685 213 333 48 60 chrX 13189815 13189898 -153460398 - ID SINE ID -141 83 2 3 685 265 400 108 15 chrX 13190049 13190252 -153460044 - L2a LINE L2 -284 3142 2921 3 685 882 297 116 69 chrX 13190281 13190642 -153459654 - L2a LINE L2 -1044 2375 1973 3 685 298 219 68 14 chrX 13190642 13190716 -153459580 - ID4_ SINE ID -3 80 3 3 685 882 297 116 69 chrX 13190716 13191015 -153459281 - L2a LINE L2 -1447 1972 1682 3 685 206 339 70 0 chrX 13191015 13191130 -153459166 + MIRb SINE MIR 2 124 -144 3 685 4817 94 7 7 chrX 13191833 13192509 -153457787 + L1Md_F2 LINE L1 5906 6581 -1 3 685 1201 84 22 6 chrX 13192924 13193103 -153457193 + B2_Mm2 SINE B2 1 182 -13 3 685 602 254 36 0 chrX 13193342 13193480 -153456816 - B1F1 SINE Alu -6 143 1 3 685 244 228 11 141 chrX 13193509 13193601 -153456695 + MT2B2 LTR ERVL 161 240 -344 3 685 1644 156 172 6 chrX 13194660 13195002 -153455294 + MTD LTR MaLR 21 419 0 3 685 264 167 0 0 chrX 13195280 13195328 -153454968 + A-rich Low_complexity Low_complexity 1 48 0 3 685 830 215 0 0 chrX 13195941 13196085 -153454211 - B1_Mur1 SINE Alu -4 145 2 3 685 521 242 52 66 chrX 13196449 13196661 -153453635 + B3 SINE B2 2 210 -6 3 685 378 301 121 50 chrX 13197138 13197320 -153452976 + B3A SINE B2 1 195 -3 3 685 3169 48 5 0 chrX 13199020 13199415 -153450881 - L1_Mus1 LINE L1 0 6567 6171 3 685 1477 60 0 0 chrX 13199415 13199598 -153450698 + L1_Mus1 LINE L1 5997 6179 -388 3 685 550 0 29 0 chrX 13200284 13200354 -153449942 + (TCTCCC)n Simple_repeat Simple_repeat 3 74 0 3 685 193 405 39 34 chrX 13201104 13201283 -153449013 - L2b LINE L2 -211 3164 2985 3 685 606 282 77 14 chrX 13201731 13201940 -153448356 + ID_B1 SINE B4 2 223 -1 3 685 438 284 0 25 chrX 13202464 13202583 -153447713 - PB1D10 SINE Alu -1 116 1 3 685 346 208 181 0 chrX 13203545 13203617 -153446679 + RSINE1 SINE B4 3 87 -78 3 685 420 241 28 9 chrX 13203725 13203834 -153446462 + PB1D9 SINE Alu 1 111 -9 3 685 27 0 0 0 chrX 13203834 13203861 -153446435 + AT_rich Low_complexity Low_complexity 1 27 0 3 685 279 0 0 0 chrX 13204003 13204034 -153446262 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 685 779 152 0 36 chrX 13204241 13204378 -153445918 - B1_Mur2 SINE Alu 0 149 18 3 685 232 292 0 0 chrX 13204685 13204733 -153445563 - B3A SINE B2 -89 109 62 3 685 585 0 0 0 chrX 13204971 13205036 -153445260 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 3 685 727 342 192 41 chrX 13205469 13206647 -153443649 - L2a LINE L2 -246 3180 1818 3 685 607 262 37 10 chrX 13206757 13206910 -153443386 - RSINE1 SINE B4 -4 161 3 3 685 426 245 258 5 chrX 13207067 13207284 -153443012 + L1MC4 LINE L1 7524 7795 -247 3 685 367 259 101 7 chrX 13207623 13207771 -153442525 - L2a LINE L2 -1879 1540 1379 3 685 315 0 0 0 chrX 13207866 13207901 -153442395 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 685 563 129 10 0 chrX 13207920 13208021 -153442275 - L1_Mus3 LINE L1 -6 6632 6531 3 685 186 286 0 0 chrX 13208023 13208058 -153442238 - MER5A DNA MER1_type -152 37 3 3 685 349 324 30 75 chrX 13208058 13208249 -153442047 - L2a LINE L2 -2026 1393 1212 3 685 563 277 61 35 chrX 13208481 13208709 -153441587 + L1MB2 LINE L1 5666 5899 -272 3 685 403 315 45 25 chrX 13208734 13208936 -153441360 + L1MB2 LINE L1 5966 6171 0 3 685 22 0 0 0 chrX 13210386 13210408 -153439888 + AT_rich Low_complexity Low_complexity 1 22 0 3 685 22 0 0 0 chrX 13210492 13210514 -153439782 + AT_rich Low_complexity Low_complexity 1 22 0 3 685 381 105 0 34 chrX 13211013 13211072 -153439224 + PB1D9 SINE Alu 3 59 -61 3 685 370 161 31 41 chrX 13211166 13211263 -153439033 + B1_Mus2 SINE Alu 42 137 -10 3 685 311 269 12 25 chrX 13211368 13211448 -153438848 - ID2 SINE ID -3 80 2 3 685 268 316 8 50 chrX 13211457 13211577 -153438719 - PB1D10 SINE Alu -2 115 1 3 685 1240 83 44 16 chrX 13212259 13212442 -153437854 + B2_Mm2 SINE B2 2 189 -6 3 685 217 395 11 34 chrX 13213262 13213351 -153436945 - L2b LINE L2 -50 3325 3239 3 685 218 192 19 37 chrX 13213642 13213696 -153436600 + CT-rich Low_complexity Low_complexity 1 53 0 3 685 413 237 13 0 chrX 13214275 13214351 -153435945 + ID4_ SINE ID 4 80 -3 3 685 693 216 60 0 chrX 13214400 13214534 -153435762 + B1_Mus2 SINE Alu 1 142 -5 3 685 417 225 11 11 chrX 13214725 13214815 -153435481 - BC1_Mm scRNA scRNA -61 91 2 3 685 315 0 0 0 chrX 13214880 13214915 -153435381 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 685 729 128 18 0 chrX 13214915 13215024 -153435272 - PB1D9 SINE Alu -8 112 2 3 685 480 260 80 33 chrX 13215134 13215285 -153435011 - RSINE1 SINE B4 0 165 8 4 685 24 67 0 0 chrX 13216019 13216064 -153434232 + AT_rich Low_complexity Low_complexity 1 45 0 4 685 33204 30 0 0 chrX 13218411 13223149 -153427147 - L1Md_T LINE L1 0 6582 1845 4 685 581 188 98 1 chrX 13223150 13223290 -153427006 + B3 SINE B2 30 190 -8 4 685 209 161 0 0 chrX 13224108 13224139 -153426157 + polypyrimidine Low_complexity Low_complexity 1 31 0 4 685 784 169 43 29 chrX 13224139 13224279 -153426017 - B1_Mur1 SINE Alu -6 143 2 4 685 1721 208 67 6 chrX 13224333 13224677 -153425619 - Lx9 LINE L1 -695 6949 6585 4 685 1853 243 112 22 chrX 13224680 13225303 -153424993 + Lx9 LINE L1 6930 7608 -36 4 685 1141 54 0 20 chrX 13225473 13225623 -153424673 + B1_Mus2 SINE Alu 1 147 0 4 685 2121 158 57 15 chrX 13225913 13226317 -153423979 + MTC LTR MaLR 1 421 0 4 685 228 293 13 13 chrX 13226443 13226519 -153423777 + (CA)n Simple_repeat Simple_repeat 2 77 0 4 685 248 307 0 0 chrX 13227423 13227498 -153422798 + MER46C DNA MER2_type 264 338 0 4 685 318 269 14 14 chrX 13228221 13228304 -153421992 - B4A SINE B4 -141 83 1 4 685 290 343 64 18 chrX 13228765 13228875 -153421421 - PB1D10 SINE Alu 0 117 3 4 685 1111 56 42 0 chrX 13228956 13229098 -153421198 - B1_Mus1 SINE Alu 0 148 1 4 685 620 297 38 47 chrX 13229435 13229753 -153420543 - L1M5 LINE L1 -665 5575 5261 4 685 2491 262 29 55 chrX 13229905 13230799 -153419497 + Lx5 LINE L1 6246 7058 0 4 685 313 322 182 29 chrX 13230895 13231208 -153419088 + MamRep605 Unknown Unknown 24 384 -492 4 685 219 300 83 0 chrX 13231300 13231360 -153418936 + MIR SINE MIR 41 105 -157 4 685 300 339 0 9 chrX 13231837 13231953 -153418343 - PB1D10 SINE Alu 0 117 3 4 685 241 220 0 0 chrX 13233405 13233455 -153416841 + HAL1 LINE L1 2435 2484 -23 4 685 463 185 222 0 chrX 13233573 13233681 -153416615 - B1_Mur2 SINE Alu -17 132 1 4 685 195 42 0 0 chrX 13234017 13234041 -153416255 + (A)n Simple_repeat Simple_repeat 1 24 0 4 685 262 248 34 96 chrX 13234522 13234700 -153415596 + Lx7 LINE L1 7511 7677 -19 4 685 23 0 0 0 chrX 13234704 13234727 -153415569 + AT_rich Low_complexity Low_complexity 1 23 0 4 685 213 39 0 0 chrX 13234881 13234907 -153415389 + (TATG)n Simple_repeat Simple_repeat 3 28 0 4 685 423 96 489 0 chrX 13234959 13235053 -153415243 - B1_Mur4 SINE Alu -6 144 5 4 685 692 38 19 19 chrX 13235058 13235164 -153415132 + (TCTCC)n Simple_repeat Simple_repeat 1 106 0 4 685 766 190 36 0 chrX 13235189 13235326 -153414970 - B1_Mur1 SINE Alu -7 142 1 4 686 708 91 0 0 chrX 13240185 13240295 -153410001 + (TTTCC)n Simple_repeat Simple_repeat 5 114 0 4 686 906 81 0 0 chrX 13240296 13240420 -153409876 + (TTTC)n Simple_repeat Simple_repeat 2 125 0 4 686 1029 64 7 28 chrX 13240420 13240555 -153409741 - B1_Mus2 SINE Alu -12 135 1 4 686 22 35 0 0 chrX 13241111 13241140 -153409156 + AT_rich Low_complexity Low_complexity 1 29 0 4 686 872 267 14 19 chrX 13241312 13241526 -153408770 + B3 SINE B2 2 214 -2 4 686 24 77 0 0 chrX 13241870 13241922 -153408374 + AT_rich Low_complexity Low_complexity 1 52 0 4 686 216 0 0 0 chrX 13243571 13243595 -153406701 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 686 21 0 0 0 chrX 13243733 13243754 -153406542 + AT_rich Low_complexity Low_complexity 1 21 0 4 686 25 0 0 0 chrX 13243937 13243962 -153406334 + AT_rich Low_complexity Low_complexity 1 25 0 4 686 352 333 86 23 chrX 13244083 13244258 -153406038 + MIR SINE MIR 10 195 -67 4 686 260 277 196 7 chrX 13244271 13244409 -153405887 - MIRb SINE MIR -7 261 98 4 686 687 308 35 47 chrX 13245060 13245292 -153405004 - B4 SINE B4 -14 278 50 4 686 1373 76 16 11 chrX 13245561 13245747 -153404549 + B2_Mm2 SINE B2 1 187 -8 4 686 22 70 0 0 chrX 13245836 13245879 -153404417 + AT_rich Low_complexity Low_complexity 1 43 0 4 686 747 183 220 11 chrX 13245888 13246065 -153404231 + B3 SINE B2 2 215 -1 4 686 432 220 40 0 chrX 13246088 13246188 -153404108 + PB1D9 SINE Alu 4 107 -13 4 686 412 39 0 0 chrX 13246203 13246254 -153404042 + LSU-rRNA_Hsa rRNA rRNA 2365 2415 -2620 4 686 559 126 67 8 chrX 13247232 13247352 -153402944 + Lx7 LINE L1 7570 7696 0 4 686 516 255 33 46 chrX 13248180 13248332 -153401964 + MER20 DNA MER1_type 50 199 -20 4 686 187 189 38 0 chrX 13248601 13248654 -153401642 + GA-rich Low_complexity Low_complexity 1 55 0 4 686 280 208 13 53 chrX 13249037 13249113 -153401183 + CT-rich Low_complexity Low_complexity 1 73 0 4 686 702 122 19 0 chrX 13249114 13249221 -153401075 - B1_Mus1 SINE Alu -5 143 35 4 686 463 238 130 6 chrX 13249221 13249390 -153400906 + L2a LINE L2 3190 3422 -4 4 686 432 236 109 80 chrX 13249939 13250077 -153400219 + ID_B1 SINE B4 83 224 0 4 686 2825 66 8 3 chrX 13250935 13251314 -153398982 - L1Md_F2 LINE L1 -3 6579 6199 4 686 1545 212 56 54 chrX 13251460 13251833 -153398463 + ORR1D1 LTR MaLR 1 374 0 4 686 2685 92 0 21 chrX 13252591 13252969 -153397327 + L1_Mus4 LINE L1 5790 6159 -477 4 686 516 261 12 77 chrX 13255433 13255603 -153394693 - Tigger5 DNA MER2_type -1 2405 2247 4 686 327 301 0 11 chrX 13255631 13255725 -153394571 - Tigger5 DNA MER2_type -2306 100 8 4 686 248 355 26 13 chrX 13256573 13256650 -153393646 + ID2 SINE ID 3 80 -3 4 686 4008 67 19 2 chrX 13256775 13257311 -153392985 + L1_Mus3 LINE L1 6094 6638 0 4 686 612 293 148 48 chrX 13257472 13257823 -153392473 + LTR80A LTR ERVL 198 583 0 4 686 542 209 32 39 chrX 13260765 13260919 -153389377 - Lx6 LINE L1 0 7460 7308 4 686 313 305 131 15 chrX 13261859 13262119 -153388177 - L1M5 LINE L1 -444 5680 5391 4 686 7143 159 30 76 chrX 13262658 13264114 -153386182 + Lx3C LINE L1 5587 6974 -2 4 686 21 36 0 0 chrX 13264247 13264275 -153386021 + AT_rich Low_complexity Low_complexity 1 28 0 4 686 444 37 0 0 chrX 13264404 13264458 -153385838 + (TTCC)n Simple_repeat Simple_repeat 3 56 0 4 686 423 224 0 0 chrX 13264464 13264540 -153385756 - ID4_ SINE ID -6 77 2 4 686 360 186 0 0 chrX 13265212 13265282 -153385014 + MER34A LTR ERV1 1 70 -501 4 686 429 333 18 30 chrX 13265269 13265436 -153384860 - Charlie10 DNA MER1_type -2657 165 1 4 686 292 275 76 27 chrX 13265934 13266158 -153384138 + L1M5 LINE L1 2737 2971 -3175 4 686 424 340 0 0 chrX 13266179 13266282 -153384014 + B1_Mur2 SINE Alu 5 107 -42 4 686 204 213 0 0 chrX 13266344 13266405 -153383891 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 686 423 330 84 4 chrX 13266469 13266706 -153383590 + L1M5 LINE L1 5552 5807 -317 4 686 379 104 15 15 chrX 13267003 13267071 -153383225 - Lx3C LINE L1 -2 6974 6907 4 686 1077 247 55 87 chrX 13267071 13267291 -153383005 + Lx6 LINE L1 5349 5566 -314 4 686 1093 64 14 0 chrX 13267291 13267432 -153382864 + B1_Mus2 SINE Alu 5 147 0 4 686 1955 213 73 34 chrX 13267432 13268059 -153382237 + Lx6 LINE L1 5567 6203 -1257 4 686 1329 265 59 33 chrX 13268058 13268612 -153381684 + Lx6 LINE L1 6454 7305 -155 4 686 264 200 0 0 chrX 13268671 13268726 -153381570 + (CATATA)n Simple_repeat Simple_repeat 4 58 0 4 686 555 81 0 0 chrX 13269012 13269098 -153381198 + (GA)n Simple_repeat Simple_repeat 1 86 0 4 686 332 150 67 0 chrX 13269491 13269551 -153380745 - B1F SINE Alu -7 142 79 4 686 495 33 0 0 chrX 13269956 13270017 -153380279 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 686 810 264 62 10 chrX 13270018 13270213 -153380083 - B4A SINE B4 -6 286 82 4 686 553 299 70 98 chrX 13271152 13271300 -153378996 - MIR SINE MIR -2 260 118 4 686 1390 74 88 42 chrX 13271300 13271540 -153378756 - L1_Mus3 LINE L1 -7 6631 6381 4 686 553 299 70 98 chrX 13271540 13271647 -153378649 - MIR SINE MIR -145 117 12 4 686 263 138 62 0 chrX 13271878 13271943 -153378353 + (TATAA)n Simple_repeat Simple_repeat 1 69 0 4 686 180 0 0 0 chrX 13272804 13272824 -153377472 + (TC)n Simple_repeat Simple_repeat 1 20 0 4 686 563 311 102 36 chrX 13272872 13273176 -153377120 + L2a LINE L2 3100 3423 -3 4 686 375 78 0 0 chrX 13274852 13274903 -153375393 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 686 297 293 110 37 chrX 13275248 13275439 -153374857 + L1MC LINE L1 5656 5860 -2022 4 686 252 0 0 0 chrX 13275462 13275490 -153374806 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 4 686 1231 14 0 0 chrX 13275492 13275633 -153374663 - B1_Mm SINE Alu -6 141 1 4 686 576 229 46 0 chrX 13276100 13276231 -153374065 + B1_Mur2 SINE Alu 5 141 -8 4 686 275 277 8 30 chrX 13276954 13277088 -153373208 - L1MD3 LINE L1 -177 7784 7654 4 686 1568 27 38 0 chrX 13277091 13277277 -153373019 + B2_Mm2 SINE B2 1 193 -2 4 686 1378 74 16 21 chrX 13277353 13277547 -153372749 + B2_Mm2 SINE B2 3 195 0 4 686 23 0 0 0 chrX 13277712 13277735 -153372561 + AT_rich Low_complexity Low_complexity 1 23 0 4 686 319 249 100 99 chrX 13277763 13277985 -153372311 - L1MD3 LINE L1 -296 7699 7309 4 686 299 239 51 2 chrX 13278090 13278180 -153372116 - L1MD3 LINE L1 -987 7008 6904 4 686 879 243 30 0 chrX 13278312 13278514 -153371782 + B3 SINE B2 2 209 -7 4 686 23 0 0 0 chrX 13278515 13278538 -153371758 + AT_rich Low_complexity Low_complexity 1 23 0 4 686 272 48 24 0 chrX 13278577 13278619 -153371677 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 686 887 296 55 15 chrX 13278760 13279034 -153371262 + B4A SINE B4 8 292 0 4 686 448 283 190 36 chrX 13279536 13280235 -153370061 + L1ME3B LINE L1 942 1748 -4494 4 686 521 148 8 77 chrX 13280481 13280598 -153369698 + B2_Mm2 SINE B2 85 193 -2 4 686 328 261 159 0 chrX 13280814 13280902 -153369394 + RSINE1 SINE B4 8 109 -56 4 686 342 0 0 0 chrX 13280903 13280941 -153369355 + (TC)n Simple_repeat Simple_repeat 1 38 0 4 686 384 40 0 0 chrX 13280941 13280990 -153369306 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 686 361 273 218 24 chrX 13281025 13281521 -153368775 + L1ME3B LINE L1 3355 3946 -2200 4 686 649 253 45 0 chrX 13281607 13281761 -153368535 + RSINE1 SINE B4 3 163 -2 5 686 210 71 0 0 chrX 13281765 13281793 -153368503 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 5 686 808 293 103 68 chrX 13281998 13282561 -153367735 + L1ME3B LINE L1 4424 5006 -1140 4 686 240 292 82 16 chrX 13282914 13283036 -153367260 + L1ME3B LINE L1 5740 5869 -371 4 686 242 300 41 16 chrX 13283194 13283316 -153366980 + L1ME3B LINE L1 6093 6217 -23 4 686 1606 232 80 18 chrX 13283408 13283808 -153366488 + Lx8 LINE L1 6911 7335 -138 5 686 538 217 102 0 chrX 13283843 13283988 -153366308 + B3 SINE B2 11 162 -33 5 686 65 14 0 0 chrX 13284034 13284106 -153366190 + AT_rich Low_complexity Low_complexity 1 72 0 5 686 30 45 0 0 chrX 13284345 13284389 -153365907 + AT_rich Low_complexity Low_complexity 1 44 0 5 686 22 0 0 0 chrX 13284447 13284469 -153365827 + AT_rich Low_complexity Low_complexity 1 22 0 5 686 896 268 86 35 chrX 13284812 13285102 -153365194 + MER68 LTR ERVL 11 315 -248 5 686 357 255 305 0 chrX 13285113 13285254 -153365042 + MER77 LTR ERVL 416 599 -8 5 686 180 0 0 0 chrX 13285269 13285289 -153365007 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 686 585 218 96 8 chrX 13286225 13286350 -153363946 - B1_Mus2 SINE Alu -11 136 1 5 686 4608 47 2 15 chrX 13286461 13287048 -153363248 - L1Md_F2 LINE L1 -2 6580 6002 5 686 332 193 23 0 chrX 13288628 13288716 -153361580 + Lx5 LINE L1 6950 7039 -11 5 686 392 305 108 12 chrX 13288734 13288900 -153361396 - L3 LINE CR1 -167 4322 4141 5 686 558 103 0 0 chrX 13289004 13289082 -153361214 - B2_Mm2 SINE B2 -116 79 2 5 686 22 0 0 0 chrX 13289185 13289207 -153361089 + AT_rich Low_complexity Low_complexity 1 22 0 5 686 323 273 66 164 chrX 13289223 13289444 -153360852 - RSINE1 SINE B4 -12 280 2 5 686 251 289 194 14 chrX 13289452 13289596 -153360700 + Charlie2a DNA MER1_type 72 241 -2620 5 686 369 273 70 54 chrX 13289769 13289955 -153360341 + Charlie2a DNA MER1_type 1458 1646 -1215 5 686 1243 196 10 0 chrX 13289990 13290199 -153360097 - B3 SINE B2 -5 211 1 5 686 1231 286 120 47 chrX 13290662 13291113 -153359183 + MLT1F2 LTR MaLR 77 560 0 5 686 181 335 191 28 chrX 13291168 13291383 -153358913 - L3 LINE CR1 -900 3589 3340 5 686 699 288 0 0 chrX 13292619 13292772 -153357524 + ID_B1 SINE B4 70 222 -2 5 686 316 305 34 34 chrX 13292652 13292798 -153357498 - YREP_Mm Unknown Unknown -1517 295 150 5 686 277 241 225 35 chrX 13294030 13294172 -153356124 - MIR SINE MIR -85 177 9 5 686 206 244 75 85 chrX 13294299 13294393 -153355903 + MIRc SINE MIR 2 94 -174 5 686 270 0 0 0 chrX 13294569 13294599 -153355697 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 686 1168 60 12 12 chrX 13296376 13296546 -153353750 + L1_Mus1 LINE L1 6398 6567 0 5 686 434 235 117 26 chrX 13296605 13296813 -153353483 - MER33 DNA MER1_type -97 227 18 5 686 654 268 25 0 chrX 13296844 13297001 -153353295 - RSINE1 SINE B4 -2 163 3 5 686 189 74 0 0 chrX 13297504 13297531 -153352765 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 686 708 210 0 256 chrX 13298843 13298976 -153351320 + RLTR17 LTR ERVK 203 317 -375 5 686 1201 41 0 0 chrX 13298976 13299122 -153351174 + B1_Mus2 SINE Alu 2 147 0 5 686 708 210 0 256 chrX 13299122 13299289 -153351007 + RLTR17 LTR ERVK 318 426 -266 5 686 1770 157 22 60 chrX 13299289 13299607 -153350689 + RLTR19-int LTR ERVK 4071 4376 -1761 5 686 3744 93 4 2 chrX 13300291 13300806 -153349490 + RMER2 LTR ERV1 1 516 -51 5 686 229 449 0 0 chrX 13301765 13301863 -153348433 - L4 LINE RTE -887 1142 1045 5 686 253 299 165 0 chrX 13301953 13302050 -153348246 + PB1D7 SINE Alu 1 113 -7 5 686 253 321 12 36 chrX 13303502 13303586 -153346710 + MER81 DNA AcHobo 17 98 -16 5 686 288 289 57 66 chrX 13303735 13303857 -153346439 + MIRb SINE MIR 116 236 -32 5 686 22 0 0 0 chrX 13304529 13304551 -153345745 + AT_rich Low_complexity Low_complexity 1 22 0 5 686 3033 172 176 8 chrX 13304551 13305195 -153345101 - Lx4B LINE L1 -9 7049 6298 5 686 3448 163 60 5 chrX 13305196 13306066 -153344230 + Lx4B LINE L1 5375 6276 -782 5 686 24 53 0 0 chrX 13306095 13306133 -153344163 + AT_rich Low_complexity Low_complexity 1 38 0 5 686 261 345 32 32 chrX 13306582 13306705 -153343591 - MIR SINE MIR -65 143 21 5 686 297 109 0 0 chrX 13307208 13307254 -153343042 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 686 270 0 0 0 chrX 13307255 13307285 -153343011 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 686 4296 95 180 1 chrX 13307472 13307818 -153342478 + Lx3C LINE L1 6155 6576 -400 5 686 189 0 0 0 chrX 13307818 13307839 -153342457 + (AACTG)n Simple_repeat Simple_repeat 4 24 0 5 686 4296 95 180 1 chrX 13307839 13308188 -153342108 + Lx3C LINE L1 6577 6973 -3 5 686 303 255 0 11 chrX 13308393 13308488 -153341808 + L1M4b LINE L1 105 198 -7136 5 686 25 31 0 0 chrX 13309383 13309415 -153340881 + AT_rich Low_complexity Low_complexity 1 32 0 5 686 479 328 140 24 chrX 13309809 13310059 -153340237 + RMER15 LTR ERVL 297 575 0 5 686 768 359 65 40 chrX 13310059 13310431 -153339865 + LTR16B2 LTR ERVL 82 462 0 5 686 777 135 0 0 chrX 13310992 13311118 -153339178 + (GGGA)n Simple_repeat Simple_repeat 4 129 0 5 686 321 197 28 0 chrX 13311137 13311208 -153339088 + HAL1 LINE L1 840 912 -1595 5 686 389 331 211 84 chrX 13311273 13311609 -153338687 + MTEa LTR MaLR 1 379 0 5 686 1900 307 95 33 chrX 13311609 13312460 -153337836 + MTEa-int LTR MaLR 1 904 -676 5 686 668 279 41 62 chrX 13312456 13312700 -153337596 + MTEa-int LTR MaLR 1335 1573 -7 5 686 250 396 25 49 chrX 13312706 13312828 -153337468 + MTEa LTR MaLR 1 119 -260 5 686 520 333 132 19 chrX 13313066 13313445 -153336851 + HAL1 LINE L1 1033 1454 -1053 5 686 375 273 85 14 chrX 13313458 13313599 -153336697 - MIRb SINE MIR -39 229 79 5 686 297 343 49 42 chrX 13313654 13313940 -153336356 + HAL1 LINE L1 1550 1837 -670 5 686 21 0 0 0 chrX 13314077 13314098 -153336198 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 424 124 0 30 chrX 13314530 13314608 -153335688 + MTD LTR MaLR 306 405 -14 5 686 26 30 0 0 chrX 13314821 13314854 -153335442 + AT_rich Low_complexity Low_complexity 1 33 0 5 686 248 266 16 148 chrX 13316083 13316211 -153334085 + PB1D7 SINE Alu 2 112 -8 5 686 184 191 119 0 chrX 13317630 13317672 -153332624 + L3 LINE CR1 2165 2211 -2278 5 686 305 347 69 23 chrX 13317844 13318062 -153332234 + MIRc SINE MIR 33 260 -8 5 686 384 286 121 17 chrX 13318817 13318991 -153331305 + L1M5 LINE L1 3498 3689 -2457 5 686 672 268 99 66 chrX 13319066 13319553 -153330743 + L1MD LINE L1 3878 4380 -1766 5 686 25 0 0 0 chrX 13319645 13319670 -153330626 + AT_rich Low_complexity Low_complexity 1 25 0 5 686 658 276 28 0 chrX 13319673 13319887 -153330409 + L1M2 LINE L1 4041 4260 -1880 5 686 288 73 0 0 chrX 13319892 13319933 -153330363 + Lx5 LINE L1 4974 5014 -866 5 686 422 88 0 0 chrX 13319932 13319983 -153330313 + L1Md_F2 LINE L1 5536 5586 -297 5 686 8012 48 1 3 chrX 13319983 13320978 -153329318 + L1Md_F2 LINE L1 5587 6579 -3 5 686 4252 223 70 62 chrX 13320978 13323017 -153327279 + Lx5 LINE L1 5010 7030 -20 5 686 762 244 181 72 chrX 13323042 13323311 -153326985 + L1M2 LINE L1 4305 4645 -1498 5 686 751 184 7 0 chrX 13323311 13323452 -153326844 + B1_Mur3 SINE Alu 2 143 -6 5 686 762 244 181 72 chrX 13323452 13323602 -153326694 + L1M2 LINE L1 4646 4783 -1360 5 686 474 49 0 0 chrX 13323602 13323663 -153326633 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 686 762 244 181 72 chrX 13323663 13323883 -153326413 + L1M2 LINE L1 4784 5015 -1128 5 686 766 245 7 0 chrX 13323887 13324030 -153326266 + B1_Mur1 SINE Alu 6 149 0 5 686 4015 184 83 20 chrX 13324097 13324723 -153325573 + Lx9 LINE L1 6700 7353 -291 5 686 3117 33 7 37 chrX 13324723 13325131 -153325165 + MTA_Mm LTR MaLR 1 396 0 5 686 8066 68 16 4 chrX 13325132 13326216 -153324080 + MTA_Mm-int LTR MaLR 2 1098 0 5 686 3210 43 5 10 chrX 13326216 13326614 -153323682 + MTA_Mm LTR MaLR 1 396 0 5 686 4015 184 83 20 chrX 13326614 13326873 -153323423 + Lx9 LINE L1 7354 7643 -1 5 686 572 284 48 26 chrX 13327020 13327432 -153322864 + L1M2 LINE L1 5061 5524 -779 5 686 690 311 149 63 chrX 13327494 13327627 -153322669 + L1MD LINE L1 4413 4557 -1589 5 686 3395 23 2 10 chrX 13327627 13328026 -153322270 - MTA_Mm LTR MaLR 0 396 1 5 686 690 326 158 43 chrX 13328026 13328561 -153321735 + L1MD LINE L1 4558 5162 -984 5 686 621 241 10 97 chrX 13328773 13328980 -153321316 + L1M5 LINE L1 5405 5593 -571 5 686 1115 250 113 12 chrX 13329168 13329504 -153320792 - MTD LTR MaLR -14 405 36 5 686 1020 153 111 0 chrX 13329517 13329707 -153320589 + URR1A DNA MER1_type 16 226 0 5 686 4001 224 51 13 chrX 13329920 13330849 -153319447 - RCHARR1 DNA MER1_type -2 972 9 5 686 1088 90 0 0 chrX 13330953 13331098 -153319198 + B1_Mus2 SINE Alu 3 147 0 5 686 3128 30 37 20 chrX 13331134 13331538 -153318758 + RLTR10A LTR ERVK 1 411 0 5 686 213 343 58 29 chrX 13331538 13331709 -153318587 + L2 LINE L2 1907 2082 -1337 5 686 1330 276 92 28 chrX 13332518 13332977 -153317319 - MLT1D LTR MaLR 0 505 18 5 686 439 284 46 0 chrX 13334299 13334408 -153315888 + PB1D10 SINE Alu 1 114 -3 5 686 1127 304 134 49 chrX 13334498 13335146 -153315150 + LTR41 LTR ERVL 53 755 -13 5 686 847 155 0 0 chrX 13335912 13336041 -153314255 + B3 SINE B2 2 130 -86 5 686 27 0 0 0 chrX 13336084 13336111 -153314185 + AT_rich Low_complexity Low_complexity 1 27 0 5 686 290 245 0 0 chrX 13336436 13336489 -153313807 - RSINE1 SINE B4 -111 54 2 5 686 23 68 0 0 chrX 13336632 13336676 -153313620 + AT_rich Low_complexity Low_complexity 1 44 0 5 686 256 279 141 47 chrX 13336785 13336913 -153313383 + MIRb SINE MIR 99 238 -30 5 686 247 185 193 24 chrX 13337052 13337135 -153313161 - MLT1A LTR MaLR -267 107 11 5 686 25 0 0 0 chrX 13337277 13337302 -153312994 + AT_rich Low_complexity Low_complexity 1 25 0 5 686 504 0 0 0 chrX 13338417 13338473 -153311823 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 686 25 0 0 0 chrX 13339027 13339052 -153311244 + AT_rich Low_complexity Low_complexity 1 25 0 5 686 450 301 61 86 chrX 13339685 13339862 -153310434 - B4 SINE B4 -18 274 110 5 686 1253 79 6 0 chrX 13339862 13340039 -153310257 + L1Md_F2 LINE L1 6391 6568 -14 5 686 450 301 61 86 chrX 13340039 13340141 -153310155 - B4 SINE B4 -183 109 2 5 686 399 298 127 51 chrX 13340142 13340653 -153309643 - L1ME3A LINE L1 -346 5894 5321 5 686 197 304 0 0 chrX 13341005 13341051 -153309245 - L2a LINE L2 -15 3411 3366 5 686 481 324 42 7 chrX 13341496 13341639 -153308657 - LTR87 LTR ERVL? -252 372 225 5 686 263 303 22 0 chrX 13341635 13341724 -153308572 - Charlie2b DNA MER1_type -682 2100 2010 5 686 248 266 89 12 chrX 13341762 13341844 -153308452 - ID4 SINE ID -56 96 6 5 686 1909 296 81 13 chrX 13341916 13342519 -153307777 + MER82 DNA MER2_type 10 653 0 6 686 348 263 153 73 chrX 13342525 13342644 -153307652 + L1MB8 LINE L1 5694 5820 -364 6 686 3688 161 26 36 chrX 13342644 13343347 -153306949 + Lx3C LINE L1 6279 6974 -2 6 686 372 263 153 73 chrX 13343347 13343666 -153306630 + L1MB8 LINE L1 5821 6167 -17 6 686 1090 260 50 42 chrX 13343879 13344257 -153306039 - L1MA4 LINE L1 -372 5928 5548 6 686 442 114 25 0 chrX 13344265 13344344 -153305952 + (TA)n Simple_repeat Simple_repeat 2 82 0 6 686 258 140 0 89 chrX 13344355 13344410 -153305886 - L1MA4 LINE L1 -827 5473 5428 6 686 578 235 253 23 chrX 13344410 13344584 -153305712 - B3 SINE B2 -1 215 2 6 686 245 231 0 182 chrX 13344584 13344660 -153305636 - L1MA4 LINE L1 -872 5428 5366 6 686 282 336 27 81 chrX 13344662 13344811 -153305485 - B1_Mm SINE Alu -1 146 6 6 686 345 329 52 108 chrX 13344713 13344907 -153305389 - ID_B1 SINE B4 -40 184 2 6 686 464 315 71 0 chrX 13344990 13345117 -153305179 - RSINE1 SINE B4 -5 160 25 6 686 19775 151 18 50 chrX 13345158 13346614 -153303682 + Lx LINE L1 2181 3672 -2214 6 686 2128 51 17 104 chrX 13346614 13346961 -153303335 + L1_Mus2 LINE L1 6250 6566 0 6 686 19775 151 18 50 chrX 13346961 13347455 -153302841 + Lx LINE L1 3673 3990 -1896 6 686 3377 33 2 0 chrX 13347455 13347850 -153302446 + MTA_Mm LTR MaLR 1 396 0 6 686 19775 136 13 41 chrX 13347850 13350067 -153300229 + Lx LINE L1 3991 6216 -438 6 686 864 287 34 46 chrX 13350481 13350874 -153299422 + MER92B LTR ERV1 7 539 -97 6 686 241 333 12 25 chrX 13350899 13350979 -153299317 - Charlie2b DNA MER1_type -2479 303 225 5 686 230 194 0 16 chrX 13351891 13351954 -153298342 + (CAGG)n Simple_repeat Simple_repeat 2 63 0 6 686 575 290 38 19 chrX 13352971 13353235 -153297061 - L1MD2 LINE L1 -3 6356 6088 6 686 804 263 44 4 chrX 13353377 13353629 -153296667 - L1MC LINE L1 -1390 4756 4495 6 686 367 289 0 0 chrX 13353760 13353843 -153296453 - B4 SINE B4 -166 126 44 6 686 260 258 71 10 chrX 13353907 13354005 -153296291 - L1M4c LINE L1 -3808 3198 3095 6 686 309 328 182 30 chrX 13354015 13354147 -153296149 + RSINE1 SINE B4 14 165 0 6 686 377 248 51 0 chrX 13354182 13354337 -153295959 - L1M4c LINE L1 -3900 3108 2945 6 686 310 290 23 61 chrX 13354429 13354561 -153295735 - L1M4c LINE L1 -4639 2695 2569 6 686 565 219 35 49 chrX 13354561 13354705 -153295591 + B1_Mur1 SINE Alu 1 142 -7 6 686 737 281 65 43 chrX 13354754 13355123 -153295173 - L1M4c LINE L1 -4586 2422 2046 6 686 5438 126 50 7 chrX 13355427 13356218 -153294078 + Lx2 LINE L1 6054 6866 -131 6 686 183 80 0 0 chrX 13356218 13356243 -153294053 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 6 686 5438 126 50 7 chrX 13356243 13356354 -153293942 + Lx2 LINE L1 6867 6994 -3 6 686 272 301 0 0 chrX 13356395 13356468 -153293828 + ID4_ SINE ID 2 74 -9 6 686 2135 182 23 11 chrX 13356649 13357089 -153293207 - Lx2B LINE L1 -553 6447 6003 6 686 2093 169 54 115 chrX 13357085 13357600 -153292696 + Lx2B LINE L1 6429 6912 -88 6 686 29 60 0 0 chrX 13357630 13357680 -153292616 + AT_rich Low_complexity Low_complexity 1 50 0 6 686 745 274 16 16 chrX 13357781 13357974 -153292322 + B3A SINE B2 1 193 -5 6 686 436 336 30 0 chrX 13358018 13358149 -153292147 - RSINE1 SINE B4 -29 136 2 6 686 24 96 0 0 chrX 13358457 13358530 -153291766 + AT_rich Low_complexity Low_complexity 1 73 0 6 686 545 259 27 67 chrX 13358666 13358815 -153291481 - ID_B1 SINE B4 -1 223 81 6 686 289 275 153 87 chrX 13358970 13358992 -153291304 + MamRep1161 DNA TcMar 271 289 -668 6 686 1158 56 68 0 chrX 13358992 13359153 -153291143 + L1_Mus1 LINE L1 6396 6567 0 6 686 289 275 153 87 chrX 13359153 13359453 -153290843 + MamRep1161 DNA TcMar 290 618 -339 6 686 5126 59 20 5 chrX 13359453 13360117 -153290179 + L1Md_F2 LINE L1 5908 6581 -1 6 686 3975 119 0 12 chrX 13360110 13360714 -153289582 + Lx3C LINE L1 6373 6969 -7 6 686 222 353 43 91 chrX 13360799 13360822 -153289474 - B4A SINE B4 -44 248 181 6 686 596 232 35 48 chrX 13360822 13360967 -153289329 - B1_Mur1 SINE Alu -2 147 5 6 686 222 353 43 91 chrX 13360967 13361008 -153289288 - B4A SINE B4 -44 180 50 6 686 180 273 36 18 chrX 13361375 13361431 -153288865 - L3 LINE CR1 -3719 770 714 6 686 300 231 0 0 chrX 13361484 13361536 -153288760 + ID4 SINE ID 28 79 -4 6 686 853 229 9 14 chrX 13361873 13362090 -153288206 - B3 SINE B2 0 216 1 6 686 477 62 0 0 chrX 13362474 13362539 -153287757 + (TA)n Simple_repeat Simple_repeat 2 66 0 6 686 31 58 0 0 chrX 13363388 13363440 -153286856 + AT_rich Low_complexity Low_complexity 1 52 0 6 686 523 230 0 14 chrX 13363549 13363690 -153286606 - Lx9 LINE L1 0 7644 7506 6 686 5978 69 10 5 chrX 13363878 13364681 -153285615 + L1_Mus3 LINE L1 5825 6631 -7 6 686 342 0 0 0 chrX 13365327 13365365 -153284931 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 686 368 223 80 0 chrX 13366020 13366132 -153284164 + Lx9 LINE L1 7516 7636 -8 6 686 23 33 0 0 chrX 13366132 13366162 -153284134 + AT_rich Low_complexity Low_complexity 1 30 0 6 686 207 0 0 0 chrX 13366714 13366737 -153283559 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 6 686 258 125 0 0 chrX 13366847 13366895 -153283401 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 686 2245 304 96 24 chrX 13367039 13367950 -153282346 - Lx8 LINE L1 -246 7227 6252 6 686 1382 297 21 40 chrX 13367968 13368062 -153282234 + L1_Mur3 LINE L1 3003 3096 -2784 6 686 552 222 43 29 chrX 13368062 13368201 -153282095 + B1_Mur1 SINE Alu 5 145 -4 6 686 1382 297 21 40 chrX 13368201 13368772 -153281524 + L1_Mur3 LINE L1 3097 3654 -2226 6 686 1044 51 0 0 chrX 13369207 13369344 -153280952 - L1_Mus2 LINE L1 -1 6565 6429 6 687 297 0 0 0 chrX 13369510 13369543 -153280753 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 687 3310 206 113 36 chrX 13369607 13369660 -153280636 + RCHARR1 DNA MER1_type 3 64 -910 6 687 249 33 0 0 chrX 13369660 13369690 -153280606 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 687 3310 206 113 36 chrX 13369690 13370539 -153279757 + RCHARR1 DNA MER1_type 65 973 -1 6 687 226 343 8 110 chrX 13370680 13370798 -153279498 - MER20B DNA MER1_type -672 111 6 6 687 1349 107 58 17 chrX 13371010 13371288 -153279008 + BGLII LTR ERVK 1 282 -140 6 687 4805 231 50 14 chrX 13371288 13372419 -153277877 + Lx7 LINE L1 6144 7314 -382 6 687 201 213 0 0 chrX 13372420 13372467 -153277829 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 687 257 171 27 41 chrX 13372509 13372582 -153277714 + Lx7 LINE L1 7605 7676 -20 6 687 793 48 0 0 chrX 13372596 13372700 -153277596 - B1_Mus2 SINE Alu -2 145 42 6 687 219 29 0 56 chrX 13372776 13372812 -153277484 - PB1D9 SINE Alu -61 59 26 6 687 223 61 0 0 chrX 13372780 13372813 -153277483 - B1F2 SINE Alu -92 57 25 6 687 183 307 225 16 chrX 13374392 13374521 -153275775 + L2 LINE L2 2456 2611 -808 6 687 541 332 50 32 chrX 13374690 13374875 -153275421 - L1MDb LINE L1 -5459 1081 884 6 687 1453 241 73 11 chrX 13374875 13375232 -153275064 + MTE2b LTR MaLR 1 379 0 6 687 541 332 50 32 chrX 13375232 13375329 -153274967 - L1MDb LINE L1 -5657 883 795 6 687 321 405 28 42 chrX 13375691 13375905 -153274391 - L1MDb LINE L1 -6291 342 132 6 687 496 301 29 22 chrX 13375981 13376120 -153274176 + ORR1E LTR MaLR 1 140 -219 6 687 734 260 109 39 chrX 13376708 13376964 -153273332 - B4A SINE B4 -18 274 1 6 687 22 35 0 0 chrX 13377115 13377144 -153273152 + AT_rich Low_complexity Low_complexity 1 29 0 6 687 1182 56 0 0 chrX 13377911 13378054 -153272242 - B1_Mus2 SINE Alu -4 143 1 6 687 1414 81 0 5 chrX 13378070 13378268 -153272028 - L1Md_F2 LINE L1 -12 6570 6374 6 687 2779 62 62 0 chrX 13378269 13378637 -153271659 + L1Md_F2 LINE L1 5771 6161 -421 6 687 933 156 167 30 chrX 13378982 13379180 -153271116 + URR1B DNA MER1_type 1 225 0 6 687 337 227 53 0 chrX 13379651 13379726 -153270570 + MTE2b LTR MaLR 1 79 -300 6 687 377 158 0 0 chrX 13379772 13379829 -153270467 - MTE2b LTR MaLR -256 123 67 6 687 661 292 47 19 chrX 13380008 13380221 -153270075 + MER58A DNA MER1_type 4 222 -2 6 687 620 230 52 57 chrX 13380537 13380749 -153269547 - L1MC3 LINE L1 -119 7666 7456 6 687 305 282 59 0 chrX 13380817 13380902 -153269394 + ORR1E LTR MaLR 22 111 -248 6 687 33 0 0 0 chrX 13381361 13381394 -153268902 + AT_rich Low_complexity Low_complexity 1 33 0 6 687 383 219 0 94 chrX 13383316 13383422 -153266874 + MIR SINE MIR 96 191 -71 6 687 388 198 78 19 chrX 13383462 13383565 -153266731 - MLT1A1 LTR MaLR 0 408 300 6 687 633 293 87 23 chrX 13384102 13384367 -153265929 - B4A SINE B4 -9 283 2 6 687 2369 245 81 22 chrX 13384536 13385166 -153265130 - Lx9 LINE L1 -239 7405 6739 6 687 588 265 80 36 chrX 13385287 13385424 -153264872 - RSINE1 SINE B4 0 165 23 6 687 1082 90 0 0 chrX 13385455 13385599 -153264697 - B1_Mus2 SINE Alu -3 144 1 6 687 21 0 0 0 chrX 13386286 13386307 -153263989 + AT_rich Low_complexity Low_complexity 1 21 0 6 687 773 252 7 0 chrX 13386661 13386808 -153263488 + RSINE1 SINE B4 16 163 -2 6 687 222 351 72 67 chrX 13386808 13386841 -153263455 + B3A SINE B2 15 195 -3 6 687 335 182 13 13 chrX 13387010 13387088 -153263208 + RLTR15 LTR ERVK 34 111 -248 6 687 389 215 94 31 chrX 13387198 13387294 -153263002 - RSINE1 SINE B4 -61 104 3 6 687 545 281 80 22 chrX 13387934 13388072 -153262224 + B3A SINE B2 1 146 -52 6 687 232 329 0 14 chrX 13388137 13388211 -153262085 + ID4 SINE ID 1 73 -10 6 687 216 0 0 0 chrX 13388211 13388235 -153262061 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 6 687 299 286 0 13 chrX 13388251 13388329 -153261967 + ID4 SINE ID 1 77 -6 6 687 286 290 32 0 chrX 13388712 13388774 -153261522 - MER2B DNA MER2_type -272 64 1 6 687 1454 164 162 6 chrX 13388837 13389157 -153261139 - ORR1D2 LTR MaLR 0 370 1 6 687 339 303 89 53 chrX 13389632 13389863 -153260433 + L2b LINE L2 3171 3422 -4 6 687 226 326 95 0 chrX 13390049 13390144 -153260152 + MIR SINE MIR 9 112 -150 6 687 1092 267 0 61 chrX 13390180 13390475 -153259821 + B4A SINE B4 4 280 -12 6 687 247 317 105 9 chrX 13390834 13390939 -153259357 + MIRb SINE MIR 151 265 -3 6 687 752 297 96 35 chrX 13390987 13391382 -153258914 + Lx8 LINE L1 6835 7253 -220 6 687 250 232 0 80 chrX 13391395 13391470 -153258826 + RMER15 LTR ERVL 403 471 -104 6 687 23 0 0 0 chrX 13391631 13391654 -153258642 + AT_rich Low_complexity Low_complexity 1 23 0 7 687 2750 173 76 20 chrX 13391784 13392326 -153257970 + Lx5 LINE L1 6479 7050 0 7 687 1282 292 74 31 chrX 13392648 13393034 -153257262 + Lx8 LINE L1 6937 7329 -144 7 687 189 0 0 0 chrX 13393034 13393055 -153257241 + (CA)n Simple_repeat Simple_repeat 2 22 0 7 687 1282 292 74 31 chrX 13393055 13393181 -153257115 + Lx8 LINE L1 7330 7470 -3 7 687 497 295 58 226 chrX 13393276 13393629 -153256667 + ORR1E LTR MaLR 1 292 -67 7 687 829 218 0 106 chrX 13393629 13393865 -153256431 + B3 SINE B2 1 211 -5 7 687 497 295 58 226 chrX 13393865 13393940 -153256356 + ORR1E LTR MaLR 293 357 -2 7 687 2731 60 0 13 chrX 13394148 13394612 -153255684 + L1_Mus2 LINE L1 5495 5936 -630 7 687 954 220 75 19 chrX 13394816 13395029 -153255267 + B4A SINE B4 12 236 -56 7 687 848 249 35 0 chrX 13395027 13395200 -153255096 - ID_B1 SINE B4 -45 179 1 7 687 562 299 108 72 chrX 13395877 13396183 -153254113 + ORR1E LTR MaLR 1 317 -42 7 687 397 373 81 47 chrX 13396326 13396821 -153253475 + MLT1J LTR MaLR 1 512 0 7 687 283 275 58 92 chrX 13397374 13397479 -153252817 + RSINE1 SINE B4 17 124 -41 7 687 504 48 0 0 chrX 13397479 13397542 -153252754 + (CA)n Simple_repeat Simple_repeat 1 63 0 7 687 283 275 58 92 chrX 13397542 13397556 -153252740 + RSINE1 SINE B4 125 132 -33 7 687 22 56 0 0 chrX 13397607 13397643 -153252653 + AT_rich Low_complexity Low_complexity 1 36 0 7 687 443 210 0 0 chrX 13398445 13398526 -153251770 - ID4 SINE ID -1 82 2 7 687 273 380 87 40 chrX 13399578 13399591 -153250705 + B4 SINE B4 74 149 -143 7 687 462 283 75 0 chrX 13399591 13399697 -153250599 + B1_Mur1 SINE Alu 2 115 -34 7 687 309 51 0 0 chrX 13401660 13401699 -153248597 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 687 450 255 0 41 chrX 13401763 13401861 -153248435 + RSINE1 SINE B4 29 122 -43 7 687 207 0 0 0 chrX 13401927 13401950 -153248346 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 687 242 325 24 40 chrX 13402030 13402155 -153248141 - L2a LINE L2 -48 3378 3256 7 687 405 343 72 48 chrX 13402522 13402773 -153247523 + L1M4 LINE L1 489 745 -5797 7 687 937 282 131 13 chrX 13403040 13403196 -153247100 - Lx9 LINE L1 -1732 5912 5742 7 687 294 50 0 0 chrX 13403196 13403236 -153247060 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 687 937 284 128 14 chrX 13403236 13403795 -153246501 - Lx9 LINE L1 -133 5744 4937 7 687 604 307 5 32 chrX 13403970 13404155 -153246141 - B3A SINE B2 -18 180 1 7 687 306 354 133 15 chrX 13404160 13404355 -153245941 + L1M4 LINE L1 738 955 -5587 7 687 377 316 73 22 chrX 13404366 13404502 -153245794 + B1F SINE Alu 6 148 -1 7 687 252 268 18 0 chrX 13404768 13404824 -153245472 - RSINE1 SINE B4 -22 143 87 7 687 327 261 142 8 chrX 13405015 13405135 -153245161 + L1M4 LINE L1 1331 1466 -5180 7 687 676 288 72 32 chrX 13405203 13405608 -153244688 - L1M3 LINE L1 -1949 4191 3771 7 687 236 330 25 82 chrX 13405697 13405819 -153244477 - MIR3 SINE MIR -1 207 93 7 687 2286 239 78 44 chrX 13406296 13407013 -153243283 - L1M3 LINE L1 -2366 3774 3029 7 687 1112 249 25 11 chrX 13407013 13407293 -153243003 - B4A SINE B4 -8 284 1 7 687 2286 239 78 44 chrX 13407293 13407569 -153242727 - L1M3 LINE L1 -3112 3028 2747 7 687 440 77 15 0 chrX 13407733 13407798 -153242498 + (TC)n Simple_repeat Simple_repeat 2 67 0 7 687 524 246 38 23 chrX 13407848 13407981 -153242315 + MER3 DNA MER1_type 2 136 -73 7 687 1661 244 64 11 chrX 13407981 13408590 -153241706 - L1MB7 LINE L1 -5 6179 5539 7 687 293 296 48 7 chrX 13408814 13408960 -153241336 - L1MB7 LINE L1 -688 5486 5335 7 687 1177 176 34 5 chrX 13409107 13409313 -153240983 + URR1B DNA MER1_type 14 225 0 7 687 189 0 0 0 chrX 13409682 13409703 -153240593 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 7 687 1234 41 0 0 chrX 13409703 13409850 -153240446 - B1_Mus2 SINE Alu 0 147 1 7 687 22 0 0 0 chrX 13410259 13410281 -153240015 + AT_rich Low_complexity Low_complexity 1 22 0 7 687 407 233 59 17 chrX 13411466 13411584 -153238712 - MER58B DNA MER1_type 0 341 219 7 687 450 309 58 26 chrX 13411671 13411827 -153238469 - MER5A DNA MER1_type -22 167 7 7 687 628 229 45 25 chrX 13412148 13412305 -153237991 + RSINE1 SINE B4 2 161 -4 7 687 733 213 0 0 chrX 13412405 13412532 -153237764 - B3A SINE B2 -68 130 4 7 687 516 243 39 0 chrX 13412619 13412722 -153237574 + B1_Mur1 SINE Alu 6 112 -37 7 687 348 354 71 0 chrX 13412722 13412746 -153237550 + B4 SINE B4 91 226 -66 7 687 293 313 52 30 chrX 13412730 13412855 -153237441 - PB1D10 SINE Alu -6 142 3 7 687 1485 199 45 59 chrX 13413309 13413815 -153236481 - Lx9 LINE L1 -22 7622 7064 7 687 262 226 0 0 chrX 13414097 13414150 -153236146 + B3A SINE B2 4 56 -142 7 687 471 191 65 19 chrX 13414186 13414293 -153236003 + PB1D9 SINE Alu 5 116 -4 7 687 1353 65 27 5 chrX 13414295 13414480 -153235816 + B2_Mm2 SINE B2 1 189 -6 7 687 248 279 102 80 chrX 13415165 13415230 -153235066 - B2_Mm1a SINE B2 -1 192 2 7 687 658 186 0 33 chrX 13415230 13415352 -153234944 - RSINE1 SINE B4 -45 120 3 7 687 243 0 0 0 chrX 13415546 13415573 -153234723 + (T)n Simple_repeat Simple_repeat 1 27 0 7 687 452 286 0 23 chrX 13416044 13416173 -153234123 - MIRb SINE MIR -58 210 85 7 687 608 182 169 6 chrX 13416679 13416839 -153233457 - MTD LTR MaLR 0 419 234 7 687 1302 142 14 18 chrX 13417633 13417856 -153232440 - URR1A DNA MER1_type 0 226 5 7 687 21 36 0 0 chrX 13418295 13418323 -153231973 + AT_rich Low_complexity Low_complexity 1 28 0 7 687 293 320 19 19 chrX 13418840 13418945 -153231351 - MER5B DNA MER1_type -60 118 14 7 687 187 240 77 39 chrX 13419129 13419207 -153231089 - L2a LINE L2 -95 3331 3251 7 687 307 217 25 117 chrX 13419635 13419755 -153230541 + PB1D9 SINE Alu 5 113 -7 7 687 613 237 15 7 chrX 13420106 13420242 -153230054 + B1_Mur1 SINE Alu 1 137 -12 7 687 204 273 0 0 chrX 13420324 13420368 -153229928 + (TGGG)n Simple_repeat Simple_repeat 2 45 0 7 687 276 276 109 14 chrX 13421259 13421406 -153228890 + MER3 DNA MER1_type 28 188 -21 7 687 1318 191 75 32 chrX 13421386 13421759 -153228537 + Charlie5 DNA MER1_type 2236 2624 0 7 687 55 40 0 0 chrX 13423374 13423450 -153226846 + GC_rich Low_complexity Low_complexity 1 76 0 7 687 186 43 0 0 chrX 13423714 13423737 -153226559 + (TCC)n Simple_repeat Simple_repeat 1 23 0 7 687 209 0 97 0 chrX 13425038 13425069 -153225227 + (CAAAA)n Simple_repeat Simple_repeat 3 36 0 7 687 473 310 124 119 chrX 13426155 13426558 -153223738 - MLT1L LTR MaLR -38 572 108 7 687 440 258 471 49 chrX 13427378 13427582 -153222714 + B4A SINE B4 2 291 -1 7 687 272 276 28 9 chrX 13427584 13427690 -153222606 + (CATA)n Simple_repeat Simple_repeat 4 111 0 7 687 273 89 0 0 chrX 13427852 13427897 -153222399 + (T)n Simple_repeat Simple_repeat 1 45 0 7 687 547 321 0 14 chrX 13428212 13428351 -153221945 - B3A SINE B2 -60 138 2 7 687 40 21 0 0 chrX 13428748 13428795 -153221501 + AT_rich Low_complexity Low_complexity 1 47 0 7 687 315 162 0 0 chrX 13428806 13428886 -153221410 + CT-rich Low_complexity Low_complexity 1 80 0 7 687 375 41 0 0 chrX 13428886 13428935 -153221361 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 687 481 271 29 50 chrX 13428938 13429078 -153221218 - B3A SINE B2 -47 151 15 7 687 187 273 35 35 chrX 13429079 13429136 -153221160 + MER5B DNA MER1_type 113 169 -9 7 687 1937 110 94 0 chrX 13429350 13429649 -153220647 - ORR1A2 LTR MaLR 0 327 1 7 687 311 364 67 12 chrX 13429833 13429997 -153220299 - MLT1K LTR MaLR 0 595 423 7 687 279 100 260 0 chrX 13430055 13430105 -153220191 - PB1D9 SINE Alu -5 115 53 7 687 226 297 53 32 chrX 13430765 13430859 -153219437 + L2a LINE L2 3330 3425 -1 7 687 686 301 136 0 chrX 13430865 13431078 -153219218 + Tigger5 DNA MER2_type 1 242 -2164 7 687 358 264 56 9 chrX 13431074 13431181 -153219115 + Tigger5 DNA MER2_type 2291 2402 -4 7 687 360 0 0 0 chrX 13431181 13431221 -153219075 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 687 289 307 0 0 chrX 13431225 13431300 -153218996 - ID4_ SINE ID -7 76 2 7 687 444 252 20 20 chrX 13431327 13431428 -153218868 - PB1D10 SINE Alu -15 102 2 7 687 496 261 65 13 chrX 13432509 13432664 -153217632 - MIRb SINE MIR -59 209 47 7 687 401 0 0 20 chrX 13432841 13432891 -153217405 + (TC)n Simple_repeat Simple_repeat 2 50 0 7 687 586 261 67 43 chrX 13433195 13433359 -153216937 + B3 SINE B2 13 180 -36 7 687 21 0 0 0 chrX 13433359 13433380 -153216916 + AT_rich Low_complexity Low_complexity 1 21 0 7 687 596 278 6 6 chrX 13433457 13433620 -153216676 - RSINE1 SINE B4 0 165 3 7 687 418 282 27 0 chrX 13433770 13433880 -153216416 + ID_B1 SINE B4 2 114 -110 7 687 511 239 126 35 chrX 13433878 13434061 -153216235 + B3A SINE B2 9 198 0 7 687 732 265 58 10 chrX 13434064 13434373 -153215923 + L1M4 LINE L1 4865 5188 -958 7 687 655 178 6 126 chrX 13434374 13434541 -153215755 + B1_Mur1 SINE Alu 3 149 0 7 687 234 0 0 0 chrX 13434541 13434567 -153215729 + (A)n Simple_repeat Simple_repeat 1 26 0 7 687 247 322 45 90 chrX 13435109 13435130 -153215166 + ID_B1 SINE B4 64 134 -90 7 687 268 298 92 41 chrX 13435130 13435228 -153215068 + B1F SINE Alu 1 103 -46 7 687 247 322 45 90 chrX 13435228 13435242 -153215054 + ID_B1 SINE B4 135 190 -34 7 687 479 266 30 74 chrX 13435319 13435522 -153214774 + B3A SINE B2 1 194 -4 7 687 524 289 0 0 chrX 13435631 13435735 -153214561 + PB1D9 SINE Alu 2 105 -15 7 687 385 301 168 25 chrX 13435737 13435904 -153214392 + B3 SINE B2 4 191 -25 7 687 1109 51 0 0 chrX 13435904 13436041 -153214255 - B1_Mus1 SINE Alu -11 137 1 7 687 363 328 32 43 chrX 13436041 13436061 -153214235 + B2_Mm2 SINE B2 173 189 -6 7 687 1089 56 14 7 chrX 13436095 13436240 -153214056 + B1_Mus2 SINE Alu 2 147 0 7 687 549 84 0 0 chrX 13436292 13436363 -153213933 - tRNA-Gln-CAA tRNA tRNA -4 71 1 8 687 930 101 65 0 chrX 13436398 13436537 -153213759 + B1_Mus1 SINE Alu 1 148 0 8 687 261 0 0 0 chrX 13436790 13436819 -153213477 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 687 300 111 0 0 chrX 13436872 13436926 -153213370 + (GTTTG)n Simple_repeat Simple_repeat 1 54 0 8 687 796 186 7 0 chrX 13436934 13437079 -153213217 - B1_Mus1 SINE Alu -1 147 2 8 687 588 279 96 28 chrX 13437892 13438069 -153212227 + B3 SINE B2 1 189 -27 8 687 203 161 0 0 chrX 13438107 13438138 -153212158 + polypyrimidine Low_complexity Low_complexity 1 31 0 8 687 974 114 21 0 chrX 13438138 13438278 -153212018 - B1_Mur4 SINE Alu -7 143 1 8 687 958 238 9 5 chrX 13438370 13438585 -153211711 - B3 SINE B2 0 216 1 8 687 311 342 26 0 chrX 13438589 13438703 -153211593 - PB1D10 SINE Alu 0 117 1 8 687 387 256 12 0 chrX 13438869 13438951 -153211345 - ID4_ SINE ID 0 83 1 8 687 24 32 0 0 chrX 13438970 13439001 -153211295 + AT_rich Low_complexity Low_complexity 1 31 0 8 687 224 30 30 0 chrX 13439001 13439034 -153211262 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 687 1082 72 0 0 chrX 13439034 13439172 -153211124 - B1_Mus1 SINE Alu -9 139 2 8 687 344 59 0 19 chrX 13439591 13439643 -153210653 + (TG)n Simple_repeat Simple_repeat 1 51 0 8 687 633 283 0 7 chrX 13439649 13439788 -153210508 - B3A SINE B2 -60 138 1 8 687 467 339 0 0 chrX 13439794 13439903 -153210393 - PB1D10 SINE Alu -6 111 3 8 687 9926 162 260 37 chrX 13440106 13442905 -153207391 + Lx2B LINE L1 1711 5448 -438 8 687 246 32 0 0 chrX 13442905 13442936 -153207360 + (CAAA)n Simple_repeat Simple_repeat 3 33 0 8 687 9926 179 102 23 chrX 13442936 13444438 -153205858 + Lx2B LINE L1 5449 6994 -6 8 687 229 231 59 44 chrX 13444448 13444584 -153205712 - Lx8 LINE L1 -33 7440 7303 8 687 1710 232 17 52 chrX 13444669 13444752 -153205544 - Lx8 LINE L1 -435 7038 6953 8 687 1158 148 250 36 chrX 13444752 13444922 -153205374 - ORR1D1 LTR MaLR 0 374 167 8 687 519 17 0 0 chrX 13444922 13444982 -153205314 + (GA)n Simple_repeat Simple_repeat 1 60 0 8 687 1158 148 250 36 chrX 13444982 13445119 -153205177 - ORR1D1 LTR MaLR -208 166 3 8 687 1710 246 51 39 chrX 13445119 13445819 -153204477 - Lx8 LINE L1 -521 6952 6142 8 687 612 198 103 0 chrX 13445960 13446086 -153204210 - B1_Mur2 SINE Alu -9 140 2 8 687 649 236 22 86 chrX 13446087 13446365 -153203931 - Ricksha_0 DNA MuDR -501 1232 973 8 687 409 286 87 84 chrX 13446447 13446722 -153203574 - Ricksha_0 DNA MuDR -756 977 702 8 687 423 313 69 9 chrX 13446838 13446954 -153203342 + RSINE1 SINE B4 6 128 -37 8 687 392 313 0 15 chrX 13447083 13447216 -153203080 - Ricksha_0 DNA MuDR -1280 453 323 8 687 3183 28 51 0 chrX 13447331 13447722 -153202574 + IAPLTR2a LTR ERVK 1 411 0 8 687 215 214 0 23 chrX 13447966 13448009 -153202287 + polypurine Low_complexity Low_complexity 3 44 0 8 687 1444 142 215 9 chrX 13448189 13448334 -153201962 - RMER17C LTR ERVK 0 410 228 8 687 516 32 0 0 chrX 13448334 13448396 -153201900 + (GA)n Simple_repeat Simple_repeat 1 62 0 8 687 1444 142 215 9 chrX 13448396 13448590 -153201706 - RMER17C LTR ERVK -183 227 2 8 687 290 271 118 39 chrX 13448770 13448897 -153201399 + LTR33 LTR ERVL 14 150 -365 8 687 270 343 29 19 chrX 13448920 13449024 -153201272 - ID_B1 SINE B4 -119 105 1 8 687 7899 41 1 2 chrX 13449299 13450358 -153199938 - L1Md_F2 LINE L1 0 6582 5525 8 687 216 0 0 0 chrX 13450564 13450588 -153199708 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 8 687 641 13 0 13 chrX 13450728 13450807 -153199489 + (TTC)n Simple_repeat Simple_repeat 2 79 0 8 687 3354 155 27 20 chrX 13450807 13451400 -153198896 - Lx LINE L1 -15 6639 6043 8 687 248 256 234 23 chrX 13451604 13451732 -153198564 + MLT1D LTR MaLR 1 155 -350 8 687 351 0 0 0 chrX 13451739 13451778 -153198518 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 687 22 35 0 0 chrX 13451801 13451830 -153198466 + AT_rich Low_complexity Low_complexity 1 29 0 8 687 541 364 11 22 chrX 13452090 13452270 -153198026 - MER45A DNA Tip100 0 178 1 8 687 212 59 29 0 chrX 13452651 13452685 -153197611 + (CAA)n Simple_repeat Simple_repeat 2 36 0 8 687 440 234 17 58 chrX 13453023 13453195 -153197101 - L1MA6 LINE L1 -2 6298 6134 8 687 418 302 113 40 chrX 13453195 13453319 -153196977 + RSINE1 SINE B4 3 135 -30 8 687 1369 64 16 5 chrX 13455293 13455481 -153194815 - B2_Mm2 SINE B2 -5 190 1 8 687 244 278 86 9 chrX 13455825 13455941 -153194355 - L1M5 LINE L1 -492 5632 5508 8 687 511 284 20 41 chrX 13456185 13456332 -153193964 + B1F2 SINE Alu 6 149 0 8 687 900 329 78 55 chrX 13456469 13456890 -153193406 + LTR16C LTR ERVL 58 488 -1 8 687 415 221 85 34 chrX 13456893 13457000 -153193296 - PB1D7 SINE Alu -28 121 11 8 687 1117 266 116 23 chrX 13458027 13458465 -153191831 - Lx8 LINE L1 -303 7170 6692 8 687 509 44 51 34 chrX 13458637 13458755 -153191541 + (TG)n Simple_repeat Simple_repeat 1 120 0 8 687 26 0 0 0 chrX 13459814 13459840 -153190456 + AT_rich Low_complexity Low_complexity 1 26 0 8 687 422 242 282 0 chrX 13459846 13459872 -153190424 - RSINE1 SINE B4 -6 159 126 8 687 405 0 0 0 chrX 13459872 13459917 -153190379 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 687 422 242 282 0 chrX 13459917 13460014 -153190282 - RSINE1 SINE B4 -40 125 2 8 687 441 66 0 0 chrX 13460443 13460504 -153189792 + (TG)n Simple_repeat Simple_repeat 1 61 0 8 687 255 170 0 0 chrX 13460533 13460580 -153189716 + (TA)n Simple_repeat Simple_repeat 2 48 0 8 687 623 318 52 27 chrX 13460633 13461002 -153189294 - L1MC4a LINE L1 -1941 5941 5564 8 687 259 324 39 51 chrX 13461169 13461247 -153189049 - ID4_ SINE ID -4 79 3 8 687 1163 97 11 0 chrX 13461273 13461448 -153188848 + (TTTCC)n Simple_repeat Simple_repeat 4 180 0 8 687 807 119 0 0 chrX 13461450 13461576 -153188720 + (TCCC)n Simple_repeat Simple_repeat 4 129 0 8 687 632 203 38 30 chrX 13461579 13461711 -153188585 - B1_Mur1 SINE Alu -14 135 3 8 687 235 364 23 0 chrX 13461790 13461878 -153188418 + MIRc SINE MIR 32 121 -147 8 687 462 324 156 82 chrX 13462227 13462651 -153187645 + MLT1E1 LTR MaLR 198 652 -2 8 687 746 136 0 8 chrX 13462904 13463037 -153187259 + (TCCC)n Simple_repeat Simple_repeat 3 134 0 8 687 1046 263 30 11 chrX 13463109 13463374 -153186922 - ORR1D1 LTR MaLR -102 272 3 8 687 890 253 102 105 chrX 13463411 13463782 -153186514 + ORR1D2 LTR MaLR 1 370 0 8 687 1131 123 24 19 chrX 13463794 13464001 -153186295 - L1_Mur3 LINE L1 -3546 2334 2127 8 687 3826 141 35 1 chrX 13464007 13464684 -153185612 - L1_Mur3 LINE L1 -6468 1260 561 8 687 1845 291 52 73 chrX 13464695 13465319 -153184977 - Lx8 LINE L1 -104 7369 6757 8 687 239 72 0 23 chrX 13465319 13465362 -153184934 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 8 687 1845 291 52 73 chrX 13465362 13465609 -153184687 - Lx8 LINE L1 -717 6756 6517 8 687 264 327 62 53 chrX 13465774 13465887 -153184409 - PB1D10 SINE Alu -2 115 2 8 687 474 265 0 20 chrX 13466858 13466958 -153183338 - PB1D10 SINE Alu -17 100 3 8 687 247 318 35 94 chrX 13467136 13467306 -153182990 - MIRc SINE MIR -102 166 7 8 687 323 297 223 18 chrX 13468439 13468767 -153181529 - MamGypLTR1c LTR Gypsy -386 396 11 8 687 345 301 79 22 chrX 13468773 13468912 -153181384 - L2b LINE L2 0 3375 3229 8 687 3720 97 5 52 chrX 13468913 13469423 -153180873 + L1VL4 LINE L1 199 708 -5594 8 687 1016 103 7 0 chrX 13469423 13469568 -153180728 + B1_Mus1 SINE Alu 3 148 0 8 687 3720 97 5 52 chrX 13469568 13469655 -153180641 + L1VL4 LINE L1 709 768 -5534 8 687 3628 67 10 0 chrX 13469653 13470339 -153179957 - L1_Mus1 LINE L1 -495 6072 5380 8 687 880 137 6 6 chrX 13470350 13470512 -153179784 + Lx LINE L1 6488 6649 -5 8 687 10026 64 17 17 chrX 13471414 13472882 -153177414 - Lx3_Mus LINE L1 0 7009 5546 8 687 218 235 20 0 chrX 13472927 13472978 -153177318 - B1F SINE Alu -30 119 68 8 687 728 271 0 68 chrX 13472977 13473183 -153177113 - B3A SINE B2 0 198 7 8 687 216 0 0 0 chrX 13473230 13473254 -153177042 + (T)n Simple_repeat Simple_repeat 1 24 0 8 687 1249 41 0 0 chrX 13473254 13473401 -153176895 - B1_Mm SINE Alu 0 147 1 8 687 7374 61 6 1 chrX 13473411 13474422 -153175874 - L1_Mus2 LINE L1 0 6566 5551 8 687 661 349 117 51 chrX 13474427 13474499 -153175797 + L2a LINE L2 2409 2476 -943 8 687 273 57 0 0 chrX 13474499 13474534 -153175762 + (CAA)n Simple_repeat Simple_repeat 2 36 0 8 687 661 350 107 55 chrX 13474534 13475344 -153174952 + L2a LINE L2 2477 3358 -68 8 687 817 197 13 32 chrX 13476712 13476869 -153173427 + B3 SINE B2 3 156 -60 8 687 199 309 313 0 chrX 13476872 13476971 -153173325 + MIR SINE MIR 7 136 -126 8 687 363 160 0 0 chrX 13476971 13477065 -153173231 + (TG)n Simple_repeat Simple_repeat 2 95 0 8 687 270 0 0 0 chrX 13477065 13477095 -153173201 + (GA)n Simple_repeat Simple_repeat 1 30 0 8 687 254 133 0 0 chrX 13477151 13477196 -153173100 + L1_Mur2 LINE L1 5135 5179 -698 8 687 530 284 13 20 chrX 13477196 13477347 -153172949 - RSINE1 SINE B4 -12 153 4 8 687 775 240 93 142 chrX 13477552 13477980 -153172316 - MER113 DNA MER1_type -41 480 74 8 687 267 274 65 19 chrX 13478236 13478344 -153171952 + MIRb SINE MIR 155 267 -1 8 687 494 267 9 0 chrX 13478563 13478679 -153171617 - PB1D9 SINE Alu -2 118 2 8 687 212 288 58 43 chrX 13478727 13478796 -153171500 + MIRm SINE MIR 206 275 -1 8 687 486 228 26 17 chrX 13479642 13479758 -153170538 - PB1D10 SINE Alu 0 117 1 8 687 2191 192 54 54 chrX 13479799 13480332 -153169964 - RMER16 LTR ERVK 0 533 1 8 687 209 208 18 36 chrX 13480530 13480585 -153169711 + MIRm SINE MIR 86 139 -137 8 687 262 246 0 15 chrX 13481018 13481084 -153169212 + (TATG)n Simple_repeat Simple_repeat 1 65 0 8 687 292 260 21 10 chrX 13481089 13481186 -153169110 + L1M4 LINE L1 5051 5148 -998 8 687 2558 160 25 11 chrX 13481207 13481655 -153168641 + RLTR17 LTR ERVK 176 629 -63 8 687 1223 206 52 39 chrX 13481687 13482365 -153167931 + RMER3D-int LTR ERVK 10 639 -2203 9 687 1590 180 0 51 chrX 13482393 13482745 -153167551 + RMER3D-int LTR ERVK 1210 1543 -1299 9 687 603 0 0 0 chrX 13482757 13482824 -153167472 + (TTC)n Simple_repeat Simple_repeat 2 68 0 9 687 1321 78 22 0 chrX 13482824 13483003 -153167293 - B2_Mm2 SINE B2 -12 183 1 9 687 5342 161 64 33 chrX 13483019 13484194 -153166102 + RMER3D-int LTR ERVK 1532 2742 -100 9 687 268 96 77 0 chrX 13484193 13484245 -153166051 + MYSERV16_I-int LTR ERVK 2270 2325 -1 9 687 682 161 37 3 chrX 13484246 13484393 -153165903 + BGLII_A LTR ERVK 1 151 -541 9 687 485 259 0 17 chrX 13484398 13484516 -153165780 + PB1D9 SINE Alu 2 117 -3 9 687 316 357 0 0 chrX 13484590 13484688 -153165608 + ID_B1 SINE B4 78 175 -49 9 687 1133 294 97 27 chrX 13484712 13485124 -153165172 - MLT2B1 LTR ERVL -79 441 1 9 687 2205 146 96 138 chrX 13485155 13485365 -153164931 - RMER4B LTR ERVK -15 570 339 9 687 1112 111 0 6 chrX 13485365 13485546 -153164750 + (TCC)n Simple_repeat Simple_repeat 1 180 0 9 687 2205 146 96 138 chrX 13485546 13485930 -153164366 - RMER4B LTR ERVK -247 338 1 9 687 234 0 0 0 chrX 13486976 13487002 -153163294 + (T)n Simple_repeat Simple_repeat 1 26 0 9 687 254 288 110 0 chrX 13487209 13487282 -153163014 - ID SINE ID -140 84 4 9 687 191 36 0 35 chrX 13487683 13487712 -153162584 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 9 687 261 0 0 0 chrX 13487715 13487744 -153162552 + (TG)n Simple_repeat Simple_repeat 1 29 0 9 687 428 117 13 0 chrX 13487746 13487823 -153162473 + (GA)n Simple_repeat Simple_repeat 2 79 0 9 687 562 248 0 0 chrX 13487826 13487943 -153162353 - ID_B1 SINE B4 -14 210 94 9 687 241 318 0 15 chrX 13487956 13488023 -153162273 + LTR16C LTR ERVL 207 272 -217 9 687 647 274 18 71 chrX 13488255 13488424 -153161872 + RSINE1 SINE B4 2 161 -4 9 687 660 300 24 139 chrX 13488490 13488870 -153161426 - MLT1B LTR MaLR 0 390 55 9 687 531 246 63 0 chrX 13488875 13489001 -153161295 + B1F SINE Alu 6 139 -10 9 687 468 51 0 0 chrX 13489066 13489125 -153161171 + (CCAA)n Simple_repeat Simple_repeat 2 60 0 9 687 27 0 0 0 chrX 13489202 13489229 -153161067 + AT_rich Low_complexity Low_complexity 1 27 0 9 687 520 323 169 55 chrX 13489288 13489720 -153160576 - LTR50 LTR ERVL -234 561 1 9 687 233 184 41 0 chrX 13489758 13489807 -153160489 + GA-rich Low_complexity Low_complexity 1 51 0 9 687 379 188 35 12 chrX 13489890 13489976 -153160320 - MARNA DNA Mariner -13 573 486 9 687 549 44 0 0 chrX 13490005 13490073 -153160223 + (TTTC)n Simple_repeat Simple_repeat 3 70 0 9 687 865 119 8 0 chrX 13490073 13490199 -153160097 - B1_Mus2 SINE Alu -12 135 9 9 687 419 250 41 96 chrX 13490199 13490219 -153160077 - B4 SINE B4 -78 214 77 9 687 360 202 0 0 chrX 13490581 13490660 -153159636 - Lx8 LINE L1 0 7473 7395 9 687 22 35 0 0 chrX 13490686 13490715 -153159581 + AT_rich Low_complexity Low_complexity 1 29 0 9 687 251 239 87 29 chrX 13490715 13490853 -153159443 - Lx9 LINE L1 -15 7629 7484 9 687 560 311 12 0 chrX 13490899 13491063 -153159233 - Lx8 LINE L1 -164 7309 7144 9 687 462 269 134 49 chrX 13491107 13491271 -153159025 - B3A SINE B2 -20 178 1 9 687 316 305 73 85 chrX 13491286 13491451 -153158845 - B3 SINE B2 0 216 54 9 687 457 256 8 8 chrX 13491481 13491599 -153158697 - Lx8 LINE L1 -326 7147 7030 9 687 240 35 0 0 chrX 13491992 13492021 -153158275 + (CCA)n Simple_repeat Simple_repeat 3 31 0 9 687 228 111 0 0 chrX 13492429 13492465 -153157831 + (CAAG)n Simple_repeat Simple_repeat 1 36 0 9 687 554 259 131 110 chrX 13492957 13493148 -153157148 + B3A SINE B2 1 195 -3 9 687 744 164 49 28 chrX 13493155 13493299 -153156997 + B1_Mur4 SINE Alu 1 147 -3 9 687 21 0 0 0 chrX 13493325 13493346 -153156950 + AT_rich Low_complexity Low_complexity 1 21 0 9 687 581 180 48 32 chrX 13493367 13493493 -153156803 - B1_Mur1 SINE Alu -9 140 13 9 687 250 250 11 11 chrX 13493542 13493631 -153156665 + L1M5 LINE L1 2301 2389 -3757 9 687 324 361 75 24 chrX 13493687 13494022 -153156274 + L1M5 LINE L1 2515 2866 -3280 9 687 422 149 112 41 chrX 13494034 13494132 -153156164 - B1F2 SINE Alu -5 144 40 9 687 228 257 0 67 chrX 13494070 13494145 -153156151 - RLTR25B LTR ERVK -531 497 428 9 687 243 133 0 0 chrX 13494145 13494190 -153156106 + (TC)n Simple_repeat Simple_repeat 1 45 0 9 687 741 240 40 0 chrX 13494270 13494420 -153155876 - RSINE1 SINE B4 -8 157 2 9 687 318 329 103 20 chrX 13494958 13495104 -153155192 - L2b LINE L2 -16 3359 3202 9 687 316 392 40 75 chrX 13495167 13495592 -153154704 - L2b LINE L2 -439 2980 2571 9 687 480 62 0 0 chrX 13495866 13495930 -153154366 + (TG)n Simple_repeat Simple_repeat 2 65 0 9 687 797 331 3 67 chrX 13496536 13496818 -153153478 + B4A SINE B4 11 274 -18 9 687 281 328 108 27 chrX 13497699 13497915 -153152381 - L2a LINE L2 -320 3106 2875 9 687 188 271 56 28 chrX 13497946 13498018 -153152278 - L2a LINE L2 -658 2761 2688 9 687 1118 286 46 86 chrX 13498093 13498804 -153151492 - L1ME1 LINE L1 -103 6076 5394 9 687 320 286 44 0 chrX 13498805 13498896 -153151400 - L2a LINE L2 -786 2633 2539 9 687 547 298 18 30 chrX 13499562 13499728 -153150568 + B3A SINE B2 2 165 -33 9 687 282 125 0 0 chrX 13499728 13499776 -153150520 + (TCTCCC)n Simple_repeat Simple_repeat 1 48 0 9 687 186 71 0 0 chrX 13499782 13499810 -153150486 + (CA)n Simple_repeat Simple_repeat 1 28 0 9 687 686 172 37 0 chrX 13499866 13500000 -153150296 - Lx9 LINE L1 -171 7473 7335 9 687 263 236 28 0 chrX 13500000 13500072 -153150224 - Lx9 LINE L1 -310 7334 7261 1 688 543 300 25 56 chrX 13500707 13501099 -153149197 + L1M3 LINE L1 3961 4340 -1800 2 688 376 187 0 0 chrX 13501102 13501177 -153149119 + L1MB8 LINE L1 6092 6166 -12 3 688 445 296 57 23 chrX 13501194 13501370 -153148926 - L1MEg LINE L1 -4288 1796 1615 4 688 1875 266 62 5 chrX 13501394 13501960 -153148336 + Lx7 LINE L1 6725 7322 -374 5 688 192 158 0 0 chrX 13501988 13502026 -153148270 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 6 688 1090 90 0 7 chrX 13502168 13502314 -153147982 - B1_Mm SINE Alu 0 147 3 7 688 2670 60 3 8 chrX 13502631 13502982 -153147314 - L1_Mus1 LINE L1 -1 6566 6218 8 688 617 75 0 0 chrX 13502982 13503062 -153147234 + L1_Mus1 LINE L1 6086 6165 -402 8 688 312 163 174 0 chrX 13503228 13503326 -153146970 - L1MEg LINE L1 -5185 899 785 4 688 314 333 35 44 chrX 13503402 13503515 -153146781 - RSINE1 SINE B4 -179 113 2 9 688 459 310 20 46 chrX 13503533 13503729 -153146567 - L1MEg LINE L1 -5341 743 553 1 688 32 43 0 0 chrX 13504074 13504120 -153146176 + AT_rich Low_complexity Low_complexity 1 46 0 1 688 500 226 129 0 chrX 13506068 13506192 -153144104 + ID_B1 SINE B4 85 224 0 1 688 1791 38 0 0 chrX 13506326 13506539 -153143757 + L1_Mus1 LINE L1 6353 6565 -2 1 688 246 62 0 0 chrX 13506710 13506742 -153143554 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1 688 5936 80 35 7 chrX 13506744 13507567 -153142729 - Lx3_Mus LINE L1 -1 7008 6163 1 688 5357 94 12 3 chrX 13507567 13508594 -153141702 + Lx3_Mus LINE L1 5121 6160 -849 1 688 1312 64 12 0 chrX 13508594 13508766 -153141530 - B2_Mm2 SINE B2 -21 174 1 1 688 315 371 84 47 chrX 13508808 13509105 -153141191 - L1MEg LINE L1 -5757 327 20 1 688 525 131 0 0 chrX 13509276 13509360 -153140936 + (TCTA)n Simple_repeat Simple_repeat 2 85 0 1 688 684 198 210 0 chrX 13509793 13509955 -153140341 - B3 SINE B2 -16 200 5 1 688 1176 202 248 17 chrX 13510204 13510506 -153139790 + ORR1D1 LTR MaLR 1 372 -2 2 688 301 324 118 0 chrX 13511402 13511504 -153138792 - LTR16C LTR ERVL 0 489 376 2 688 585 233 93 0 chrX 13511770 13511899 -153138397 - B3 SINE B2 -7 209 69 2 688 202 362 14 55 chrX 13512104 13512250 -153138046 + L2c LINE L2 3242 3381 -6 2 688 1196 41 0 7 chrX 13513299 13513445 -153136851 - B1_Mus2 SINE Alu -2 145 1 2 688 1184 221 92 51 chrX 13513654 13514141 -153136155 - L1MA9 LINE L1 0 6312 5806 2 688 180 0 0 0 chrX 13514338 13514358 -153135938 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 688 24 0 0 0 chrX 13514479 13514503 -153135793 + AT_rich Low_complexity Low_complexity 1 24 0 2 688 599 290 149 35 chrX 13514527 13514788 -153135508 - B4A SINE B4 0 292 2 2 688 1000 109 13 20 chrX 13515157 13515300 -153134996 + B1_Mur3 SINE Alu 1 142 -7 2 688 183 42 0 0 chrX 13515300 13515324 -153134972 + (CAATA)n Simple_repeat Simple_repeat 5 28 0 3 688 231 88 0 0 chrX 13515345 13515379 -153134917 + (CCAA)n Simple_repeat Simple_repeat 3 36 0 3 688 302 278 134 83 chrX 13515865 13516022 -153134274 - RSINE1 SINE B4 0 165 1 3 688 355 298 26 26 chrX 13516028 13516145 -153134151 - PB1D7 SINE Alu -3 117 1 3 688 942 291 88 24 chrX 13517929 13518461 -153131835 - L1MA4A LINE L1 -386 6619 6054 3 688 1099 95 0 0 chrX 13518490 13518638 -153131658 - B1_Mus1 SINE Alu 0 148 1 3 688 463 204 177 0 chrX 13518700 13518813 -153131483 - B4A SINE B4 -25 267 135 3 688 240 288 47 71 chrX 13518816 13519138 -153131158 - L1MA4A LINE L1 -4873 1976 1663 3 688 228 261 62 108 chrX 13519829 13519958 -153130338 - RMER13A LTR ERVK -592 268 146 3 688 10114 61 6 30 chrX 13519987 13522169 -153128127 - L1Md_F2 LINE L1 -13 6569 4427 3 688 31651 48 3 1 chrX 13522505 13527426 -153122870 - L1Md_T LINE L1 -2 6580 1650 3 688 3117 16 0 42 chrX 13527426 13527809 -153122487 - IAPLTR1_Mm LTR ERVK 0 367 1 4 688 14195 22 1 3 chrX 13527809 13529511 -153120785 - IAPEz-int LTR ERVK 0 6481 4784 4 688 33544 28 20 20 chrX 13529506 13533727 -153116569 - IAPEz-int LTR ERVK -2252 4229 8 4 688 3117 16 0 42 chrX 13533727 13534110 -153116186 - IAPLTR1_Mm LTR ERVK 0 367 1 4 688 4306 133 3 21 chrX 13534112 13535359 -153114937 - L1Md_T LINE L1 -4230 1653 219 3 688 23882 142 15 12 chrX 13535360 13539009 -153111287 - Lx LINE L1 -14 6640 3006 4 688 225 0 0 0 chrX 13539009 13539034 -153111262 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 4 688 23882 156 19 8 chrX 13539034 13539147 -153111149 - Lx LINE L1 -2878 3005 2886 4 688 1292 72 0 11 chrX 13539147 13539329 -153110967 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 688 23882 161 27 12 chrX 13539329 13541805 -153108491 - Lx LINE L1 -2998 2885 433 4 688 300 305 17 8 chrX 13541777 13541896 -153108400 + L1VL2 LINE L1 1 120 -6215 4 688 491 212 0 0 chrX 13543301 13543386 -153106910 + PB1D10 SINE Alu 1 85 -32 4 688 351 0 0 0 chrX 13543402 13543441 -153106855 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 688 376 303 10 0 chrX 13543441 13543540 -153106756 + PB1D10 SINE Alu 3 102 -15 4 688 645 226 7 55 chrX 13543548 13543693 -153106603 + B1_Mur1 SINE Alu 3 140 -9 4 688 468 0 0 0 chrX 13543694 13543746 -153106550 + (CAAAA)n Simple_repeat Simple_repeat 4 55 0 4 688 41 36 0 0 chrX 13544438 13544493 -153105803 + AT_rich Low_complexity Low_complexity 1 55 0 5 688 402 359 83 55 chrX 13544698 13545190 -153105106 + L1MEd LINE L1 569 1074 -5045 5 688 489 223 179 0 chrX 13545191 13545303 -153104993 + RSINE1 SINE B4 1 132 -33 5 688 880 82 0 22 chrX 13545312 13545449 -153104847 + (TCTCCC)n Simple_repeat Simple_repeat 6 139 0 5 688 28 0 0 0 chrX 13545499 13545527 -153104769 + AT_rich Low_complexity Low_complexity 1 28 0 5 688 33776 65 1 4 chrX 13545527 13551691 -153098605 - L1Md_F2 LINE L1 0 6585 338 5 688 261 258 32 0 chrX 13551723 13551785 -153098511 + MTC LTR MaLR 14 77 -344 5 688 219 36 0 0 chrX 13551861 13551889 -153098407 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 5 688 430 272 47 108 chrX 13551908 13552122 -153098174 + MT2A LTR ERVL 232 432 -101 5 688 414 0 0 0 chrX 13552192 13552238 -153098058 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 688 402 21 0 0 chrX 13552238 13552284 -153098012 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 688 3532 75 2 20 chrX 13552341 13552637 -153097659 - L1Md_F2 LINE L1 -6 6576 6289 6 688 3381 35 2 0 chrX 13552637 13553032 -153097264 - MTA_Mm LTR MaLR 0 396 1 6 688 3532 75 2 20 chrX 13553032 13553226 -153097070 - L1Md_F2 LINE L1 -294 6288 6095 6 688 4117 159 56 57 chrX 13553226 13554272 -153096024 - L1Md_F LINE L1 -5383 1158 151 6 688 573 187 19 0 chrX 13554308 13554415 -153095881 + MTC LTR MaLR 2 110 -297 6 688 922 177 6 6 chrX 13554412 13554571 -153095725 + MTC LTR MaLR 246 404 -17 6 688 208 321 0 23 chrX 13554589 13554675 -153095621 + (CATATA)n Simple_repeat Simple_repeat 2 85 0 6 688 771 301 40 15 chrX 13554746 13554784 -153095512 - L1M2 LINE L1 -585 5295 5255 6 688 1214 181 4 28 chrX 13554784 13555034 -153095262 - Lx3B LINE L1 -4 6969 6726 6 688 534 86 0 0 chrX 13555034 13555115 -153095181 + (TG)n Simple_repeat Simple_repeat 2 82 0 6 688 863 290 33 8 chrX 13555115 13555479 -153094817 - L1M2 LINE L1 -860 5283 4883 6 688 397 324 54 11 chrX 13555589 13555773 -153094523 + L1M5 LINE L1 2374 2565 -3581 6 688 423 277 98 0 chrX 13555904 13556016 -153094280 + B4A SINE B4 2 124 -168 7 688 2053 243 52 33 chrX 13556016 13556647 -153093649 + Lx8 LINE L1 6827 7469 -4 7 688 239 309 0 0 chrX 13556741 13556825 -153093471 + L1M5 LINE L1 2742 2825 -3321 6 688 21 0 0 0 chrX 13556894 13556915 -153093381 + AT_rich Low_complexity Low_complexity 1 21 0 7 688 32 57 0 0 chrX 13556952 13557005 -153093291 + AT_rich Low_complexity Low_complexity 1 53 0 7 688 7059 48 1 4 chrX 13557654 13558573 -153091723 - L1Md_F2 LINE L1 -2 6580 5665 7 688 340 304 53 79 chrX 13558668 13558820 -153091476 + ORR1E LTR MaLR 2 149 -229 7 688 636 277 73 17 chrX 13558830 13559131 -153091165 - L1M2 LINE L1 -2331 3812 3495 6 688 243 231 83 0 chrX 13559314 13559422 -153090874 - Lx7 LINE L1 -15 7681 7565 7 688 939 267 57 44 chrX 13559445 13559829 -153090467 - Lx7 LINE L1 -284 7412 7024 7 688 998 304 79 17 chrX 13559897 13560210 -153090086 - L1MA4A LINE L1 -373 5930 5594 7 688 453 81 0 0 chrX 13560210 13560272 -153090024 + (CATA)n Simple_repeat Simple_repeat 2 63 0 7 688 998 304 79 17 chrX 13560272 13560593 -153089703 - L1MA4A LINE L1 -710 5593 5258 7 688 343 305 92 18 chrX 13560606 13560833 -153089463 - L1MA4A LINE L1 -955 5188 4945 7 688 537 316 21 7 chrX 13560841 13561128 -153089168 - L1MA4A LINE L1 -2634 3509 3219 7 688 505 307 73 35 chrX 13561148 13561519 -153088777 - L1MA4A LINE L1 -3234 2909 2525 7 688 884 260 87 77 chrX 13561794 13562278 -153088018 - Lx9 LINE L1 -354 7290 6732 7 688 313 307 0 56 chrX 13562403 13562510 -153087786 - L1M2 LINE L1 -3497 2646 2546 8 688 422 176 0 0 chrX 13562510 13562578 -153087718 - U6 snRNA snRNA 0 107 40 8 688 3057 249 38 4 chrX 13562613 13563327 -153086969 + RCHARR1 DNA MER1_type 4 741 -233 8 688 25 31 0 0 chrX 13563327 13563359 -153086937 + AT_rich Low_complexity Low_complexity 1 32 0 8 688 8062 125 35 8 chrX 13563359 13564654 -153085642 - Lx4A LINE L1 0 7058 5729 8 688 1944 214 46 15 chrX 13564654 13565110 -153085186 + RCHARR1 DNA MER1_type 494 963 -11 8 688 358 295 39 45 chrX 13565136 13565292 -153085004 + Tigger16b DNA Tigger 179 333 -4 8 688 6170 82 88 1 chrX 13565296 13566196 -153084100 + Lx3_Mus LINE L1 6017 6994 -15 8 688 25 0 0 0 chrX 13566606 13566631 -153083665 + AT_rich Low_complexity Low_complexity 1 25 0 8 688 207 0 0 0 chrX 13566631 13566654 -153083642 + (TA)n Simple_repeat Simple_repeat 2 24 0 8 688 3136 179 181 19 chrX 13567001 13567741 -153082555 - RMER13A LTR ERVK 0 860 1 9 688 294 260 14 0 chrX 13568252 13568325 -153081971 + MLT1J2 LTR MaLR 336 409 -39 9 688 1070 304 113 107 chrX 13568411 13569161 -153081135 - MER21B LTR ERV1 -108 755 1 9 688 441 325 73 50 chrX 13569540 13569883 -153080413 - L1ME4a LINE L1 -113 6011 5661 9 688 641 239 92 35 chrX 13570781 13570954 -153079342 - B3A SINE B2 -15 183 1 9 688 617 286 129 12 chrX 13571546 13571794 -153078502 + B4A SINE B4 2 278 -14 9 688 187 190 17 17 chrX 13571835 13571894 -153078402 + (CATA)n Simple_repeat Simple_repeat 4 62 0 9 688 658 180 187 9 chrX 13572915 13573134 -153077162 + Lx9 LINE L1 7387 7644 0 9 688 858 175 0 0 chrX 13574328 13574465 -153075831 + B1_Mus1 SINE Alu 2 138 -10 9 688 248 322 113 109 chrX 13575875 13576105 -153074191 - MIRb SINE MIR -34 234 4 9 688 425 306 66 26 chrX 13576147 13576298 -153073998 - ID_B1 SINE B4 -11 213 57 1 688 393 314 24 82 chrX 13576494 13576654 -153073642 + RSINE1 SINE B4 3 153 -12 1 688 3026 73 27 7 chrX 13576654 13577067 -153073229 + BGLII LTR ERVK 1 421 0 1 688 309 26 0 0 chrX 13577077 13577115 -153073181 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1 688 802 259 16 11 chrX 13577128 13577319 -153072977 + B3A SINE B2 1 192 -6 1 688 651 256 110 35 chrX 13577391 13577646 -153072650 - B4A SINE B4 -18 274 1 1 688 311 382 30 48 chrX 13577919 13578084 -153072212 + LTR16A1 LTR ERVL 291 452 -4 1 688 792 188 138 20 chrX 13578604 13578800 -153071496 - MTD LTR MaLR 0 419 201 1 688 486 339 119 3 chrX 13578913 13579215 -153071081 - Lx9 LINE L1 -87 7557 7221 1 688 487 174 0 28 chrX 13579215 13579321 -153070975 - L1_Rod LINE L1 -257 5623 5503 1 688 687 277 64 15 chrX 13579321 13579527 -153070769 - MTD LTR MaLR -161 246 42 1 688 497 220 153 65 chrX 13579561 13579624 -153070672 - L1M4 LINE L1 -1139 5007 4927 1 688 450 0 0 0 chrX 13579624 13579674 -153070622 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 1 688 497 220 153 65 chrX 13579674 13579759 -153070537 - L1M4 LINE L1 -1220 4926 4850 1 688 225 0 0 0 chrX 13579759 13579784 -153070512 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 688 497 220 153 65 chrX 13579784 13579882 -153070414 - L1M4 LINE L1 -1297 4849 4738 1 688 383 276 72 88 chrX 13580004 13580254 -153070042 - L1M4 LINE L1 -3159 2987 2742 1 688 231 259 110 12 chrX 13581043 13581125 -153069171 - MTD LTR MaLR -289 90 1 1 688 277 258 108 0 chrX 13581302 13581422 -153068874 - L1MB1 LINE L1 -1 6167 6035 1 688 7411 84 2 8 chrX 13581425 13582535 -153067761 - L1_Mus3 LINE L1 -6 6632 5530 1 688 861 177 7 0 chrX 13582904 13583051 -153067245 + B1_Mus1 SINE Alu 1 148 0 1 688 520 223 9 18 chrX 13583586 13583700 -153066596 + PB1D10 SINE Alu 2 114 -3 1 688 393 318 45 45 chrX 13583767 13583991 -153066305 - RMER15 LTR ERVL -15 560 337 1 688 194 91 0 29 chrX 13584337 13584371 -153065925 + (TCC)n Simple_repeat Simple_repeat 2 34 0 1 688 1391 213 75 62 chrX 13584437 13584808 -153065488 - MTEa LTR MaLR 0 379 4 1 688 1241 168 20 95 chrX 13585347 13585643 -153064653 + Lx7 LINE L1 7132 7405 -291 1 688 510 91 0 0 chrX 13585721 13585798 -153064498 + (GA)n Simple_repeat Simple_repeat 1 77 0 1 688 356 239 62 0 chrX 13585819 13585932 -153064364 + Lx6 LINE L1 7341 7460 0 1 688 251 407 9 0 chrX 13585961 13586074 -153064222 + ID_B1 SINE B4 63 176 -48 1 688 391 293 50 0 chrX 13585989 13586088 -153064208 + PB1D10 SINE Alu 10 113 -4 1 688 22 35 0 0 chrX 13587119 13587148 -153063148 + AT_rich Low_complexity Low_complexity 1 29 0 1 688 506 268 78 52 chrX 13587159 13587352 -153062944 - B3A SINE B2 0 198 1 1 688 26 0 0 0 chrX 13589322 13589348 -153060948 + AT_rich Low_complexity Low_complexity 1 26 0 1 688 283 0 0 0 chrX 13589348 13589390 -153060906 - L1Md_T LINE L1 -1 6581 6540 1 688 451 259 28 35 chrX 13589474 13589618 -153060678 - MLT1B LTR MaLR -54 336 194 1 688 334 265 133 0 chrX 13589654 13589752 -153060544 + PB1D9 SINE Alu 10 120 0 1 688 3272 157 21 12 chrX 13589772 13590352 -153059944 - RMER4B LTR ERVK 0 585 1 1 688 233 365 0 0 chrX 13590510 13590573 -153059723 - PB1D7 SINE Alu -51 69 7 1 688 318 291 25 0 chrX 13590631 13590710 -153059586 + RSINE1 SINE B4 60 140 -25 1 688 213 152 0 0 chrX 13591016 13591049 -153059247 + B3A SINE B2 1 33 -165 1 688 799 257 21 27 chrX 13591093 13591281 -153059015 + B3 SINE B2 30 216 0 1 688 446 149 172 0 chrX 13591354 13591441 -153058855 + PB1D9 SINE Alu 7 108 -12 1 688 288 0 0 0 chrX 13591441 13591473 -153058823 + (CAAA)n Simple_repeat Simple_repeat 3 34 0 1 688 232 377 82 25 chrX 13592287 13592445 -153057851 - MIRc SINE MIR -54 214 48 1 688 601 271 0 0 chrX 13592445 13592578 -153057718 + B1F SINE Alu 1 133 -16 1 688 564 273 68 8 chrX 13592938 13593071 -153057225 - ID_B1 SINE B4 -6 218 78 1 688 455 238 49 0 chrX 13593868 13593970 -153056326 - PB1D10 SINE Alu -35 114 10 1 688 319 386 0 0 chrX 13593970 13593982 -153056314 - ID_B1 SINE B4 -32 192 79 1 688 390 258 97 0 chrX 13593982 13594106 -153056190 + LTR52-int LTR ERVL 1692 1827 -3858 1 688 1243 284 87 15 chrX 13594152 13594268 -153056028 - Lx8 LINE L1 0 7473 7354 1 688 441 54 0 0 chrX 13594268 13594324 -153055972 + (TA)n Simple_repeat Simple_repeat 1 56 0 1 688 1243 284 87 15 chrX 13594324 13594665 -153055631 - Lx8 LINE L1 -120 7353 6984 1 688 717 207 59 0 chrX 13594700 13594835 -153055461 - B1_Mur1 SINE Alu -6 143 1 1 688 1011 311 16 16 chrX 13595168 13595550 -153054746 + LTR52-int LTR ERVL 2253 2634 -922 1 688 1062 325 100 61 chrX 13595621 13596358 -153053938 + LTR52-int LTR ERVL 2754 3519 -37 1 688 408 202 48 24 chrX 13596430 13596597 -153053699 - Lx9 LINE L1 -8 7636 7466 1 688 696 336 52 30 chrX 13596608 13596970 -153053326 + LTR52 LTR ERVL 16 385 -36 1 688 343 333 20 41 chrX 13597195 13597342 -153052954 - MLT1J LTR MaLR -271 241 98 1 688 28 22 0 22 chrX 13597414 13597432 -153052864 + AT_rich Low_complexity Low_complexity 1 18 0 1 688 6821 92 29 48 chrX 13597432 13598507 -153051789 - Lx3_Mus LINE L1 0 7009 5956 1 688 28 22 0 22 chrX 13598507 13598534 -153051762 + AT_rich Low_complexity Low_complexity 1 27 0 1 688 1616 31 0 20 chrX 13598538 13598734 -153051562 - B2_Mm1a SINE B2 0 193 2 1 688 2980 79 3 0 chrX 13598734 13599125 -153051171 - L1_Mus1 LINE L1 -8 6559 6168 1 688 5860 82 12 7 chrX 13599125 13600092 -153050204 - Lx3_Mus LINE L1 -1038 5971 5000 1 688 10347 85 33 14 chrX 13600092 13600265 -153050031 - Lx3_Mus LINE L1 -3035 2851 2667 1 688 2974 47 0 0 chrX 13600265 13600625 -153049671 + L1_Mus1 LINE L1 6208 6567 0 1 688 10347 105 71 11 chrX 13600625 13602688 -153047608 - Lx3_Mus LINE L1 -3220 2666 208 1 688 331 56 0 36 chrX 13603845 13603901 -153046395 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 688 28539 119 7 43 chrX 13603965 13610553 -153039743 + L1_Mus1 LINE L1 234 6567 0 1 688 281 299 0 10 chrX 13610749 13610847 -153039449 + Lx8 LINE L1 5818 5914 -1559 1 688 302 287 25 50 chrX 13611288 13611409 -153038887 + MT2A LTR ERVL 5 122 -411 1 688 1162 186 55 36 chrX 13611315 13611625 -153038671 + ORR1A4 LTR MaLR 59 374 -45 1 688 6050 94 5 21 chrX 13611628 13613121 -153037175 + L1VL4 LINE L1 1 1482 -2077 1 688 524 74 0 0 chrX 13613121 13613202 -153037094 + L1VL4 LINE L1 1608 1688 -1871 1 688 5330 92 1 0 chrX 13613203 13614129 -153036167 + L1_Mus4 LINE L1 5391 6316 -320 1 688 227 266 107 74 chrX 13614129 13614251 -153036045 - RLTR6_Mm LTR ERV1 -181 473 348 1 688 1213 74 37 0 chrX 13614251 13614440 -153035856 + L1_Mus3 LINE L1 6441 6636 -2 1 688 633 230 75 2 chrX 13614474 13614634 -153035662 + MTD LTR MaLR 225 419 0 1 688 4420 105 22 6 chrX 13614661 13615303 -153034993 - Lx3_Mus LINE L1 -8 7001 6350 1 688 2957 88 15 11 chrX 13615303 13615765 -153034531 + L1_Mur1 LINE L1 5160 5623 -263 1 688 1331 237 143 10 chrX 13615837 13616250 -153034046 + Lx8 LINE L1 6770 7237 -236 1 688 228 247 80 30 chrX 13616289 13616389 -153033907 + Lx8 LINE L1 7367 7471 -2 1 688 480 281 29 7 chrX 13617570 13617706 -153032590 + MIR3 SINE MIR 69 207 -1 1 688 904 290 31 31 chrX 13617777 13618069 -153032227 - B4 SINE B4 0 292 1 1 688 248 312 26 52 chrX 13618310 13618425 -153031871 + MLT1A1 LTR MaLR 297 408 0 1 688 232 278 72 87 chrX 13618729 13618792 -153031504 + MLT1G3 LTR MaLR 7 62 -533 1 688 1441 127 18 18 chrX 13618792 13619016 -153031280 - URR1B DNA MER1_type -1 224 1 1 688 232 278 72 87 chrX 13619016 13619090 -153031206 + MLT1G3 LTR MaLR 63 142 -453 1 688 3669 87 31 6 chrX 13619246 13619765 -153030531 + Lx2 LINE L1 6465 6996 -1 1 688 343 209 29 15 chrX 13619883 13619951 -153030345 - MLT1H LTR MaLR -335 214 146 1 688 611 314 40 90 chrX 13620065 13620411 -153029885 - ORR1E LTR MaLR 0 359 31 1 688 1411 249 83 12 chrX 13620446 13620816 -153029480 - MTD LTR MaLR -14 405 15 1 688 2071 147 58 77 chrX 13620816 13621245 -153029051 - MTC LTR MaLR 0 421 1 1 688 758 271 72 95 chrX 13621245 13621262 -153029034 - MTD LTR MaLR -365 14 1 1 688 362 276 0 109 chrX 13621392 13621502 -153028794 + MTEa LTR MaLR 1 98 -281 1 688 300 335 79 40 chrX 13621502 13621619 -153028677 + MLT2B2 LTR ERVL 1 236 -279 1 688 1841 214 88 5 chrX 13621619 13622207 -153028089 + L1_Mur2 LINE L1 2890 3526 -2351 1 688 243 88 0 0 chrX 13622207 13622241 -153028055 + (T)n Simple_repeat Simple_repeat 1 34 0 1 688 582 91 127 0 chrX 13622260 13622370 -153027926 - L1Md_F2 LINE L1 0 6582 6459 1 688 18087 136 106 11 chrX 13622742 13624701 -153025595 - Lx LINE L1 -7 6647 4648 1 688 1165 68 0 0 chrX 13624701 13624849 -153025447 - B1_Mus1 SINE Alu 0 148 1 1 688 18087 148 123 13 chrX 13624849 13628530 -153021766 - Lx LINE L1 -1236 4647 363 1 688 369 0 0 0 chrX 13628563 13628604 -153021692 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 688 436 308 80 42 chrX 13628604 13628868 -153021428 - L1M5 LINE L1 -439 5685 5412 1 688 8105 22 0 0 chrX 13629314 13630964 -153019332 - L1Md_T LINE L1 0 6582 4933 1 688 253 195 43 109 chrX 13630964 13631056 -153019240 + RMER20A LTR ERVK 186 271 -245 1 688 385 304 95 20 chrX 13631233 13631381 -153018915 - LTR16A LTR ERVL -92 359 201 1 689 255 314 112 89 chrX 13631637 13631861 -153018435 + MIRb SINE MIR 26 254 -14 1 689 297 51 0 0 chrX 13632464 13632503 -153017793 + (CCA)n Simple_repeat Simple_repeat 3 41 0 1 689 426 274 59 113 chrX 13632697 13632919 -153017377 - MLT1B LTR MaLR -130 260 51 1 689 704 227 20 7 chrX 13633043 13633194 -153017102 + RSINE1 SINE B4 3 155 -10 1 689 287 25 25 0 chrX 13633199 13633239 -153017057 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 689 292 256 210 17 chrX 13633271 13633390 -153016906 + B1F1 SINE Alu 3 144 -5 1 689 502 278 20 14 chrX 13634378 13634524 -153015772 + B1F SINE Alu 1 147 -2 1 689 299 284 0 36 chrX 13634541 13634625 -153015671 + ID4 SINE ID 3 83 0 1 689 213 39 0 0 chrX 13634639 13634665 -153015631 + (CCAA)n Simple_repeat Simple_repeat 3 28 0 1 689 276 268 20 20 chrX 13634797 13634896 -153015400 + MER33 DNA MER1_type 81 179 -145 1 689 30 69 0 0 chrX 13634955 13635013 -153015283 + AT_rich Low_complexity Low_complexity 1 58 0 2 689 465 218 139 41 chrX 13635062 13635234 -153015062 - L1MC1 LINE L1 -9 6324 6136 2 689 4342 186 38 13 chrX 13635324 13636262 -153014034 + Lx5 LINE L1 5797 6764 -286 2 689 7354 61 12 5 chrX 13636302 13637400 -153012896 - L1_Mus2 LINE L1 0 6566 5461 2 689 550 256 69 186 chrX 13637398 13637715 -153012581 + Lx5 LINE L1 6769 7048 -2 2 689 609 226 37 118 chrX 13637782 13638053 -153012243 - L1MC1 LINE L1 -262 6071 5823 2 689 206 192 0 19 chrX 13638099 13638152 -153012144 + CT-rich Low_complexity Low_complexity 4 55 0 2 689 462 15 45 0 chrX 13638157 13638224 -153012072 + (TG)n Simple_repeat Simple_repeat 2 71 0 2 689 553 270 0 0 chrX 13638284 13638410 -153011886 + MLT1N2 LTR MaLR 437 562 0 2 689 275 230 102 11 chrX 13638840 13638928 -153011368 + MER53 DNA hAT 6 101 -92 2 689 204 167 0 0 chrX 13639208 13639256 -153011040 + CT-rich Low_complexity Low_complexity 1 48 0 2 689 433 254 34 68 chrX 13639310 13639458 -153010838 - B1F1 SINE Alu -6 143 1 2 689 234 320 30 90 chrX 13639461 13639595 -153010701 - MIRb SINE MIR -50 218 93 2 689 1961 100 38 0 chrX 13639596 13639885 -153010411 + L1_Mus2 LINE L1 6265 6564 -2 2 689 3722 38 7 7 chrX 13640476 13640932 -153009364 + L1Md_F3 LINE L1 6115 6570 -14 2 689 290 269 18 88 chrX 13641348 13641462 -153008834 + PB1D10 SINE Alu 5 110 -7 2 689 624 314 118 24 chrX 13641473 13641770 -153008526 + ORR1E LTR MaLR 1 325 -34 2 689 315 206 40 27 chrX 13642269 13642344 -153007952 - ID4_ SINE ID -6 77 2 2 689 331 293 45 8 chrX 13642362 13642496 -153007800 - B1F SINE Alu -8 141 3 2 689 493 244 41 55 chrX 13642654 13642944 -153007352 - L1_Mur3 LINE L1 -4258 1622 1337 2 689 545 254 0 0 chrX 13643008 13643118 -153007178 - PB1D9 SINE Alu -8 112 3 2 689 2099 154 25 11 chrX 13643624 13643978 -153006318 + ORR1B2 LTR MaLR 1 359 -8 2 689 318 289 0 13 chrX 13644322 13644399 -153005897 + MLT1A0 LTR MaLR 69 144 -221 2 689 10455 166 72 24 chrX 13644416 13646381 -153003915 + Lx6 LINE L1 50 2068 -3812 2 689 180 0 0 0 chrX 13646381 13646401 -153003895 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 689 10455 159 56 36 chrX 13646401 13647919 -153002377 + Lx6 LINE L1 2069 3666 -2214 2 689 29632 122 31 3 chrX 13647930 13649853 -153000443 + L1_Mus1 LINE L1 380 2348 -3535 2 689 261 0 0 0 chrX 13649853 13649882 -153000414 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 689 29632 104 2 3 chrX 13649882 13654092 -152996204 + L1_Mus1 LINE L1 2349 6566 -1 2 689 3219 163 19 0 chrX 13654099 13654714 -152995582 + Lx6 LINE L1 3652 4278 -1602 2 689 17860 79 30 9 chrX 13654718 13658200 -152992096 + L1VL4 LINE L1 1 3556 -3 2 689 7084 189 38 32 chrX 13658193 13661087 -152989209 + Lx6 LINE L1 4266 7191 -269 2 689 234 0 0 0 chrX 13661093 13661119 -152989177 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2 689 6642 119 78 8 chrX 13661121 13662547 -152987749 - Lx3B LINE L1 -6 6967 5415 2 689 4838 66 15 32 chrX 13662538 13663256 -152987040 + Lx3B LINE L1 4685 5390 -496 2 689 447 19 0 0 chrX 13663463 13663515 -152986781 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 689 30 45 0 0 chrX 13663600 13663644 -152986652 + AT_rich Low_complexity Low_complexity 1 44 0 2 689 551 251 125 41 chrX 13663883 13664203 -152986093 - L1MA7 LINE L1 -242 6049 5703 2 689 5811 73 3 5 chrX 13664397 13665219 -152985077 - L1_Mus2 LINE L1 -6 6632 5782 2 689 1079 96 0 0 chrX 13665219 13665365 -152984931 - B1_Mm SINE Alu 0 147 2 2 689 5643 100 67 56 chrX 13665365 13665529 -152984767 - L1_Mus2 LINE L1 -841 5797 5635 2 689 414 240 63 68 chrX 13665528 13665765 -152984531 - L1MA7 LINE L1 -792 5508 5273 2 689 601 263 166 72 chrX 13666041 13666614 -152983682 + L1MB8 LINE L1 5542 6168 -10 2 689 594 304 72 14 chrX 13666680 13666887 -152983409 + MLT1A0 LTR MaLR 147 365 0 2 689 603 309 82 38 chrX 13666887 13667179 -152983117 - LTR16C LTR ERVL -7 482 178 2 689 815 63 0 30 chrX 13667658 13667789 -152982507 - MusHAL1 LINE L1 -2734 620 494 2 689 325 61 444 0 chrX 13667789 13667888 -152982408 - B2_Mm2 SINE B2 -6 189 47 2 689 1220 107 11 0 chrX 13667901 13668078 -152982218 - B2_Mm1t SINE B2 -14 179 1 2 689 1371 148 0 27 chrX 13668078 13668335 -152981961 - L1VL4 LINE L1 -5592 710 461 2 689 342 0 0 0 chrX 13668380 13668418 -152981878 + (TTAA)n Simple_repeat Simple_repeat 3 40 0 2 689 865 92 0 60 chrX 13668418 13668569 -152981727 - Lx LINE L1 -9 6645 6504 2 689 925 255 53 123 chrX 13668708 13669138 -152981158 - RLTR23 LTR ERV1 -27 403 4 2 689 192 135 0 0 chrX 13669985 13670022 -152980274 + (TTTTTA)n Simple_repeat Simple_repeat 5 41 0 2 689 652 184 2 0 chrX 13670337 13670509 -152979787 + L1VL1 LINE L1 217 336 -6302 2 689 21405 67 5 5 chrX 13670477 13673451 -152976845 + L1Md_F2 LINE L1 2612 5585 -298 2 689 7855 56 8 2 chrX 13673452 13674442 -152975854 + L1Md_F2 LINE L1 5587 6582 0 2 689 204 336 99 16 chrX 13674448 13674569 -152975727 - L2b LINE L2 -25 3350 3220 2 689 329 290 46 9 chrX 13674695 13674829 -152975467 + B4 SINE B4 73 245 -47 2 689 450 0 0 0 chrX 13674881 13674931 -152975365 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 689 275 196 0 0 chrX 13675331 13675377 -152974919 + B1_Mur4 SINE Alu 7 52 -98 2 689 435 335 37 25 chrX 13675372 13675534 -152974762 - ORR1E LTR MaLR -190 169 6 2 689 224 361 0 0 chrX 13675760 13675832 -152974464 + MIR3 SINE MIR 97 168 -40 2 689 182 387 142 0 chrX 13676029 13676135 -152974161 - MIR SINE MIR -72 136 16 2 689 429 356 78 75 chrX 13676868 13677306 -152972990 - MLT1H1 LTR MaLR -8 541 103 2 689 545 269 7 29 chrX 13677334 13677458 -152972838 + ID_B1 SINE B4 90 213 -11 2 689 2309 52 3 3 chrX 13677458 13677750 -152972546 + L1_Mus1 LINE L1 6274 6565 -2 2 689 545 269 7 29 chrX 13677750 13677763 -152972533 + ID_B1 SINE B4 214 224 0 2 689 274 226 0 0 chrX 13677840 13677893 -152972403 - MLT1H1 LTR MaLR -494 61 9 2 689 4411 134 23 105 chrX 13678087 13679074 -152971222 + RMER17A2 LTR ERVK 1 906 0 2 689 615 214 201 6 chrX 13679177 13679346 -152970950 - B3 SINE B2 -12 204 3 2 689 186 407 34 0 chrX 13679515 13679633 -152970663 + L2c LINE L2 2978 3099 -288 2 689 232 314 18 79 chrX 13679660 13679774 -152970522 + MLT1A1 LTR MaLR 21 127 -281 2 689 465 302 78 117 chrX 13679817 13680098 -152970198 - MTEa LTR MaLR -2 377 108 2 689 6897 94 21 7 chrX 13680179 13681485 -152968811 - L1_Mus4 LINE L1 0 6636 5314 2 689 7595 109 17 3 chrX 13681484 13683497 -152966799 - L1VL4 LINE L1 -1469 2090 50 2 689 242 259 8 79 chrX 13683706 13683832 -152966464 - Lx5 LINE L1 0 7050 6934 2 689 3176 254 59 83 chrX 13683846 13684003 -152966293 - Lx5 LINE L1 -231 6827 6670 2 689 360 0 0 0 chrX 13684003 13684043 -152966253 + (TTG)n Simple_repeat Simple_repeat 2 41 0 2 689 7495 174 36 14 chrX 13684043 13686327 -152963969 - Lx5 LINE L1 -389 6669 4386 2 689 338 293 41 19 chrX 13686356 13686477 -152963819 + MLT1J LTR MaLR 68 180 -332 2 689 491 317 20 27 chrX 13686674 13686823 -152963473 + B1F SINE Alu 1 148 -1 2 689 303 279 0 0 chrX 13687685 13687753 -152962543 - ID4 SINE ID -3 80 13 2 689 1457 239 89 3 chrX 13687759 13688140 -152962156 - MTD LTR MaLR -3 416 3 2 689 466 168 129 0 chrX 13688647 13688748 -152961548 - L1ME2 LINE L1 -338 5826 5713 2 689 333 282 94 30 chrX 13688874 13689108 -152961188 - L1ME2 LINE L1 -458 5704 5456 2 689 207 298 29 123 chrX 13689689 13689827 -152960469 - L2c LINE L2 -17 3370 3246 2 689 1041 230 23 31 chrX 13690125 13690381 -152959915 + MTE2a LTR MaLR 126 379 0 2 689 641 357 10 0 chrX 13690405 13690604 -152959692 - Tigger5 DNA MER2_type -2205 201 1 2 689 224 302 16 0 chrX 13691146 13691209 -152959087 + (CATA)n Simple_repeat Simple_repeat 1 64 0 2 689 798 94 0 0 chrX 13691215 13691332 -152958964 + (TCTA)n Simple_repeat Simple_repeat 3 119 0 2 689 486 0 0 0 chrX 13692573 13692627 -152957669 + (GA)n Simple_repeat Simple_repeat 2 55 0 2 689 961 72 7 7 chrX 13692627 13692767 -152957529 + (GAA)n Simple_repeat Simple_repeat 3 142 0 2 689 363 44 0 0 chrX 13692767 13692811 -152957485 + (GGAA)n Simple_repeat Simple_repeat 1 45 0 2 689 1413 201 138 21 chrX 13692811 13693187 -152957109 - RMER10A LTR ERVL -20 422 3 2 689 297 336 57 8 chrX 13693187 13693290 -152957006 + ID_B1 SINE B4 72 180 -44 2 689 279 325 0 0 chrX 13693325 13693402 -152956894 + ID4 SINE ID 2 78 -5 2 689 405 0 0 0 chrX 13693402 13693447 -152956849 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 689 362 264 28 44 chrX 13693943 13694080 -152956216 + RMER10A LTR ERVL 3 142 -256 2 689 204 341 136 66 chrX 13694171 13694622 -152955674 + L2a LINE L2 2919 3368 -19 2 689 236 331 21 99 chrX 13695194 13695335 -152954961 + MER102a DNA MER1_type 4 133 -197 2 689 301 308 0 52 chrX 13695330 13695426 -152954870 + B1F1 SINE Alu 38 128 -21 2 689 606 316 9 93 chrX 13695435 13695651 -152954645 + MER102a DNA MER1_type 117 314 -16 2 689 238 229 68 54 chrX 13695815 13695889 -152954407 - MIR3 SINE MIR -53 155 81 2 689 206 118 0 38 chrX 13696016 13696069 -152954227 + (TTAA)n Simple_repeat Simple_repeat 4 54 0 2 689 192 182 0 0 chrX 13696231 13696275 -152954021 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 689 924 277 50 74 chrX 13696371 13696749 -152953547 - MTEa LTR MaLR -7 372 4 2 689 227 104 0 20 chrX 13696836 13696885 -152953411 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 689 186 271 0 0 chrX 13696954 13697002 -152953294 - L2a LINE L2 -106 3320 3273 2 689 1510 192 18 3 chrX 13697454 13697736 -152952560 - ORR1D1 LTR MaLR -88 286 1 2 689 522 0 0 0 chrX 13698772 13698830 -152951466 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 689 1066 106 0 16 chrX 13699028 13699211 -152951085 + (TCCCC)n Simple_repeat Simple_repeat 1 180 0 2 689 582 181 13 25 chrX 13699211 13699370 -152950926 + CT-rich Low_complexity Low_complexity 4 160 0 2 689 965 254 5 5 chrX 13699402 13699620 -152950676 - ID_B1 SINE B4 -5 219 2 2 689 741 299 87 30 chrX 13699663 13699998 -152950298 + ORR1E LTR MaLR 6 359 0 2 689 196 72 47 23 chrX 13700076 13700119 -152950177 + (CAAA)n Simple_repeat Simple_repeat 3 46 0 3 689 1331 62 0 6 chrX 13700426 13700605 -152949691 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 3 689 1702 65 0 0 chrX 13700606 13700887 -152949409 - L1_Mus1 LINE L1 0 6567 6347 3 689 633 70 0 0 chrX 13700887 13700973 -152949323 + Lx2A LINE L1 5659 5744 -1264 3 689 1319 67 6 0 chrX 13701080 13701259 -152949037 + L1_Mus2 LINE L1 6384 6563 -3 3 689 493 361 112 0 chrX 13701736 13701985 -152948311 + MER110 LTR ERV1 111 387 -104 3 689 214 197 95 32 chrX 13702356 13702419 -152947877 + B1F SINE Alu 65 131 -18 3 689 610 292 42 5 chrX 13703152 13703345 -152946951 - MER45B DNA Tip100 0 1040 841 3 689 635 347 131 57 chrX 13703408 13703858 -152946438 + MLT2B3 LTR ERVL 1 499 -55 3 689 324 70 0 0 chrX 13703858 13703901 -152946395 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 3 689 635 347 131 57 chrX 13703901 13703960 -152946336 + MLT2B3 LTR ERVL 500 548 -6 3 689 258 298 66 58 chrX 13704246 13704367 -152945929 + LTR48 LTR ERV1 661 782 -5 3 689 233 272 189 65 chrX 13704803 13704972 -152945324 - MIRb SINE MIR -4 264 75 3 689 668 270 0 11 chrX 13705119 13705295 -152945001 + L1MA5 LINE L1 5635 5808 -483 3 689 1060 275 20 28 chrX 13705310 13705561 -152944735 + B4 SINE B4 5 253 -39 3 689 278 229 128 0 chrX 13705615 13705724 -152944572 + L1MA5 LINE L1 5814 5936 -364 3 689 3399 57 5 5 chrX 13705884 13706324 -152943972 + L1_Mus3 LINE L1 6195 6634 -4 3 689 219 36 0 0 chrX 13706856 13706884 -152943412 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 3 689 194 306 95 69 chrX 13709390 13709506 -152940790 - MIRc SINE MIR -4 264 146 3 689 1285 227 60 36 chrX 13712189 13712491 -152937805 + MTD LTR MaLR 111 419 0 3 689 252 0 0 0 chrX 13712538 13712566 -152937730 + (T)n Simple_repeat Simple_repeat 1 28 0 3 689 505 273 8 15 chrX 13713133 13713263 -152937033 + ORR1E LTR MaLR 6 134 -225 3 689 1118 168 41 5 chrX 13713308 13713529 -152936767 - Lx9 LINE L1 -625 7019 6791 3 689 1974 194 130 4 chrX 13713544 13714050 -152936246 + Lx9 LINE L1 7075 7644 0 3 689 1547 213 121 3 chrX 13714054 13714402 -152935894 - MTD LTR MaLR -28 391 3 3 689 353 258 32 54 chrX 13714415 13714614 -152935682 + ORR1E LTR MaLR 170 374 -5 3 689 273 183 0 0 chrX 13715425 13715485 -152934811 + (TA)n Simple_repeat Simple_repeat 1 60 0 3 689 256 331 40 62 chrX 13715805 13715982 -152934314 - MER34A LTR ERV1 -358 213 41 3 689 276 170 0 0 chrX 13716382 13716435 -152933861 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 689 333 249 32 55 chrX 13717399 13717541 -152932755 - PB1D10 SINE Alu -3 124 1 3 689 308 336 124 25 chrX 13717661 13717764 -152932532 + MT2A LTR ERVL 128 242 -291 3 689 222 37 0 0 chrX 13717764 13717791 -152932505 + (CTG)n Simple_repeat Simple_repeat 1 27 0 3 689 308 336 124 25 chrX 13717791 13717928 -152932368 + MT2A LTR ERVL 243 392 -141 3 689 393 75 0 0 chrX 13717971 13718024 -152932272 + (TCCC)n Simple_repeat Simple_repeat 1 53 0 3 689 1932 125 52 10 chrX 13718067 13718375 -152931921 + ORR1A4 LTR MaLR 1 321 -8 3 689 500 335 117 43 chrX 13718446 13718770 -152931526 + ORR1E LTR MaLR 9 356 -3 3 689 3378 183 21 0 chrX 13718861 13719479 -152930817 + Lx7 LINE L1 6482 7112 -584 3 689 298 198 0 34 chrX 13719540 13719629 -152930667 + Lx7 LINE L1 7330 7415 -281 3 689 493 161 53 12 chrX 13719636 13719806 -152930490 + (TA)n Simple_repeat Simple_repeat 2 178 0 3 689 276 314 0 0 chrX 13719813 13719937 -152930359 + T-rich Low_complexity Low_complexity 1 124 0 3 689 5039 110 30 6 chrX 13719949 13720745 -152929551 - Lx3_Mus LINE L1 -412 6597 5783 3 689 39440 6 0 1 chrX 13720776 13727558 -152922738 - L1Md_A LINE L1 -1 6581 1 3 689 6649 76 0 3 chrX 13727554 13728479 -152921817 - L1_Mur1 LINE L1 -84 5802 4881 3 689 5284 65 12 53 chrX 13728507 13729258 -152921038 + L1Md_F2 LINE L1 5862 6581 -1 3 689 930 220 21 17 chrX 13729509 13729749 -152920547 + Lx7 LINE L1 7176 7416 -280 3 689 347 261 30 7 chrX 13729794 13729929 -152920367 + Lx7 LINE L1 7559 7696 0 3 689 199 367 51 0 chrX 13730184 13730263 -152920033 + L2 LINE L2 2752 2834 -585 3 689 601 262 111 0 chrX 13730302 13730527 -152919769 - L1MC1 LINE L1 -2 6331 6082 3 689 390 134 0 0 chrX 13730586 13730653 -152919643 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 689 2017 241 81 40 chrX 13730667 13731419 -152918877 - L1MC1 LINE L1 -286 6047 5265 3 689 1408 239 81 21 chrX 13731504 13731838 -152918458 + ORR1D2 LTR MaLR 2 355 -15 3 689 641 247 44 41 chrX 13732208 13732579 -152917717 - L1M5 LINE L1 -598 5580 5204 3 689 209 406 36 41 chrX 13732793 13732988 -152917308 + MIRb SINE MIR 43 236 -32 3 689 441 0 0 0 chrX 13733468 13733517 -152916779 + (CAG)n Simple_repeat Simple_repeat 2 50 0 3 689 269 317 12 24 chrX 13733752 13733836 -152916460 + MER5A DNA MER1_type 20 102 -87 3 689 1176 68 0 0 chrX 13733894 13734041 -152916255 + B1_Mus2 SINE Alu 1 147 0 3 689 492 326 14 7 chrX 13734262 13734410 -152915886 - B1F SINE Alu 0 149 1 3 689 405 268 118 50 chrX 13734830 13734991 -152915305 + MER5A DNA MER1_type 7 178 -11 3 689 805 302 9 5 chrX 13734988 13735201 -152915095 - ID_B1 SINE B4 -5 219 6 3 689 432 289 41 8 chrX 13735653 13735775 -152914521 - B3 SINE B2 -21 195 70 3 689 921 178 91 27 chrX 13735831 13736051 -152914245 - Lx2 LINE L1 -1 6996 6763 3 689 6599 151 25 48 chrX 13736035 13738849 -152911447 - Lx2 LINE L1 -349 6648 1203 3 689 3598 56 0 33 chrX 13738854 13739335 -152910961 + LTRIS_Mm LTR ERV1 18 482 0 3 689 1220 121 24 5 chrX 13739335 13739543 -152910753 - L1_Mm LINE L1 -1898 3985 3774 3 689 2580 149 37 2 chrX 13739543 13740006 -152910290 - L1VL4 LINE L1 -5611 691 213 3 689 297 0 0 0 chrX 13740306 13740339 -152909957 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 689 584 233 35 0 chrX 13740566 13740682 -152909614 + RSINE1 SINE B4 5 124 -41 3 689 360 0 0 0 chrX 13740684 13740724 -152909572 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 689 351 343 64 112 chrX 13740896 13741208 -152909088 + ORR1E LTR MaLR 18 314 -45 3 689 184 372 171 36 chrX 13742058 13742138 -152908158 + L2 LINE L2 874 962 -2457 3 689 430 236 54 9 chrX 13742138 13742249 -152908047 - PB1D7 SINE Alu -2 118 3 3 689 184 372 171 36 chrX 13742249 13742472 -152907824 + L2 LINE L2 963 1218 -2201 3 689 707 258 5 63 chrX 13742484 13742691 -152907605 + B3A SINE B2 1 195 -3 3 689 275 349 188 32 chrX 13742691 13743124 -152907172 + L2 LINE L2 1799 2301 -1118 3 689 244 102 41 0 chrX 13743177 13743226 -152907070 + (TCTCCC)n Simple_repeat Simple_repeat 3 53 0 3 689 666 342 134 10 chrX 13743314 13743828 -152906468 + L2 LINE L2 2421 2998 -421 3 689 25 75 0 0 chrX 13744139 13744192 -152906104 + AT_rich Low_complexity Low_complexity 1 53 0 3 689 2478 156 7 12 chrX 13744437 13744858 -152905438 - MTC LTR MaLR -2 419 1 3 689 2192 23 114 0 chrX 13745881 13746143 -152904153 - RLTR10B LTR ERVK 0 292 1 3 689 3569 119 0 4 chrX 13746335 13746860 -152903436 - L1_Mus4 LINE L1 -8 6628 6106 3 689 1191 126 0 29 chrX 13746861 13747118 -152903178 + L1_Mm LINE L1 3792 4026 -1851 3 689 950 119 26 0 chrX 13747118 13747269 -152903027 + L1_Mm LINE L1 4481 4635 -1248 3 689 4724 176 32 111 chrX 13747277 13748949 -152901347 - L1_Mm LINE L1 -1390 4493 2954 3 689 27564 96 2 9 chrX 13748960 13750573 -152899723 - L1_Mus1 LINE L1 -1 6566 5005 3 689 8539 25 5 0 chrX 13750573 13751563 -152898733 + L1Md_F3 LINE L1 5587 6581 -3 3 689 27564 123 3 20 chrX 13751563 13754434 -152895862 - L1_Mus1 LINE L1 -879 5004 2155 3 689 1635 31 5 0 chrX 13754434 13754626 -152895670 - B2_Mm1t SINE B2 0 193 1 3 689 27564 124 6 26 chrX 13754626 13756128 -152894168 - L1_Mus1 LINE L1 -3729 2154 697 3 689 2917 70 23 8 chrX 13756128 13756516 -152893780 + MTA_Mm LTR MaLR 3 396 0 3 689 6486 125 10 36 chrX 13756516 13756961 -152893335 - L1_Mus1 LINE L1 -5942 696 243 3 689 672 231 50 100 chrX 13756962 13757202 -152893094 - Lx6 LINE L1 -142 7318 7091 3 689 207 0 0 0 chrX 13757365 13757388 -152892908 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 689 213 39 0 0 chrX 13757395 13757421 -152892875 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 3 689 7482 47 9 1 chrX 13757938 13759212 -152891084 + L1Md_F2 LINE L1 5309 6582 0 3 689 2297 54 0 3 chrX 13759969 13760252 -152890044 + L1Md_F3 LINE L1 6277 6558 -26 3 689 270 0 0 0 chrX 13760252 13760282 -152890014 + (TAA)n Simple_repeat Simple_repeat 1 30 0 3 689 2297 54 0 3 chrX 13760282 13760293 -152890003 + L1Md_F3 LINE L1 6559 6569 -15 3 689 26 0 0 27 chrX 13760417 13760438 -152889858 + AT_rich Low_complexity Low_complexity 1 21 0 3 689 4250 112 95 28 chrX 13760438 13761125 -152889171 - RMER19A LTR ERVK 0 737 5 3 689 26 0 0 27 chrX 13761125 13761140 -152889156 + AT_rich Low_complexity Low_complexity 1 15 0 3 689 279 0 0 0 chrX 13761140 13761171 -152889125 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 689 339 353 36 29 chrX 13761182 13761319 -152888977 - RSINE1 SINE B4 -20 145 8 3 689 759 131 0 0 chrX 13761535 13761657 -152888639 - L1Md_F2 LINE L1 -356 6226 6105 3 689 1543 65 28 14 chrX 13761660 13761877 -152888419 + L1Md_F2 LINE L1 6363 6582 0 3 689 397 389 42 38 chrX 13762026 13762264 -152888032 - MLT1L LTR MaLR -358 252 14 3 689 268 319 48 48 chrX 13762291 13762459 -152887837 + MIR3 SINE MIR 37 204 -4 3 690 24 32 0 0 chrX 13762712 13762743 -152887553 + AT_rich Low_complexity Low_complexity 1 31 0 3 690 228 374 51 51 chrX 13763202 13763286 -152887010 - L2c LINE L2 -58 3329 3251 3 690 423 38 0 0 chrX 13763286 13763339 -152886957 + (TC)n Simple_repeat Simple_repeat 1 53 0 3 690 294 50 0 0 chrX 13763339 13763378 -152886918 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 690 228 374 51 51 chrX 13763378 13763489 -152886807 - L2c LINE L2 -137 3250 3134 3 690 352 203 13 26 chrX 13763500 13763576 -152886720 - ORR1E LTR MaLR 0 379 305 3 690 322 173 17 96 chrX 13763587 13763702 -152886594 - Lx9 LINE L1 -7 7637 7532 3 690 651 332 48 29 chrX 13763710 13763983 -152886313 - ORR1E LTR MaLR -74 285 8 3 690 2282 301 73 18 chrX 13763966 13764677 -152885619 - ORR1E-int LTR MaLR -29 1551 802 3 690 1101 291 53 21 chrX 13764675 13765015 -152885281 - ORR1E-int LTR MaLR -1229 351 1 3 690 579 286 96 111 chrX 13765022 13765367 -152884929 - ORR1E LTR MaLR -5 354 1 3 690 363 290 64 80 chrX 13765373 13765632 -152884664 - LTR48 LTR ERV1 -13 774 366 3 690 207 0 0 0 chrX 13765954 13765977 -152884319 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 690 349 326 133 55 chrX 13765979 13766480 -152883816 - L2c LINE L2 -281 3145 2582 3 690 2441 151 42 5 chrX 13766480 13766886 -152883410 - MTC LTR MaLR 0 421 1 3 690 349 335 138 60 chrX 13766886 13767002 -152883294 - L2c LINE L2 -838 2581 2474 3 690 34802 62 1 24 chrX 13767784 13773699 -152876597 + L1Md_T LINE L1 99 5586 -297 3 690 8018 57 0 0 chrX 13773699 13774733 -152875563 + L1Md_T LINE L1 5587 6582 0 3 690 395 323 79 35 chrX 13774984 13775212 -152875084 + Tigger5 DNA MER2_type 1 238 -2168 3 690 1059 75 7 0 chrX 13775286 13775433 -152874863 - L1_Mus1 LINE L1 0 6567 6420 4 690 246 310 29 72 chrX 13775745 13775884 -152874412 + MIR SINE MIR 56 188 -74 4 690 745 224 173 11 chrX 13775924 13776109 -152874187 + B3 SINE B2 1 215 -1 4 690 849 277 38 41 chrX 13776778 13777147 -152873149 - L1MB8 LINE L1 -1 7037 6670 4 690 832 211 115 4 chrX 13777174 13777435 -152872861 - Lx9 LINE L1 -9 7635 7346 4 690 621 277 24 41 chrX 13777430 13777764 -152872532 - L1MB8 LINE L1 -350 6672 6330 4 690 270 0 0 0 chrX 13777779 13777809 -152872487 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 690 400 252 149 0 chrX 13777844 13777951 -152872345 - RSINE1 SINE B4 -37 128 6 4 690 588 239 123 36 chrX 13778074 13778144 -152872152 - L1MB8 LINE L1 -795 6211 6125 4 690 375 23 0 0 chrX 13778144 13778188 -152872108 + (TA)n Simple_repeat Simple_repeat 1 44 0 4 690 588 307 85 67 chrX 13778188 13778373 -152871923 - L1MB8 LINE L1 -882 6124 5934 4 690 1080 29 0 0 chrX 13778373 13778509 -152871787 + L1Md_F2 LINE L1 6435 6570 -12 4 690 588 307 85 67 chrX 13778509 13778632 -152871664 - L1MB8 LINE L1 -1073 5933 5826 4 690 375 23 0 0 chrX 13778632 13778676 -152871620 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 690 588 307 85 67 chrX 13778676 13779411 -152870885 - L1MB8 LINE L1 -1181 5825 5072 4 690 232 281 24 12 chrX 13779419 13779502 -152870794 + L1M4 LINE L1 7 90 -6452 4 690 231 309 10 21 chrX 13779667 13779763 -152870533 + L1M4 LINE L1 328 422 -6120 4 690 307 230 68 85 chrX 13780015 13780145 -152870151 + PB1D7 SINE Alu 15 149 0 4 690 403 254 7 21 chrX 13780148 13780293 -152870003 + L1M4 LINE L1 957 1099 -5443 4 690 2059 144 93 8 chrX 13780318 13780674 -152869622 - ORR1B1 LTR MaLR -8 386 1 4 690 312 274 35 56 chrX 13780684 13780827 -152869469 + L1M4 LINE L1 1123 1262 -5280 4 690 760 269 83 26 chrX 13780849 13781200 -152869096 - L1MB8 LINE L1 -5745 1589 1219 4 690 306 0 0 0 chrX 13781530 13781564 -152868732 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 690 254 191 70 42 chrX 13781879 13781950 -152868346 - MIR SINE MIR 0 262 190 4 690 243 366 61 18 chrX 13785275 13785389 -152864907 + MLT1J1 LTR MaLR 18 136 -308 4 690 924 313 91 11 chrX 13785391 13785656 -152864640 + B4 SINE B4 3 288 -4 4 690 632 310 64 10 chrX 13785838 13786040 -152864256 + MLT1A0 LTR MaLR 2 214 -151 4 690 195 100 0 0 chrX 13786122 13786152 -152864144 + (TTG)n Simple_repeat Simple_repeat 3 32 0 4 690 221 224 20 20 chrX 13787130 13787180 -152863116 + MER5B DNA MER1_type 128 177 -1 4 690 453 341 6 0 chrX 13787201 13787365 -152862931 - MER5A1 DNA MER1_type -1 165 1 4 690 610 326 25 10 chrX 13787605 13787803 -152862493 - MLT1A1 LTR MaLR -12 396 196 4 690 315 242 30 0 chrX 13787803 13787869 -152862427 - MLT1A1 LTR MaLR -338 70 3 4 690 1885 117 110 0 chrX 13789281 13789598 -152860698 + Lx3B LINE L1 6620 6971 -2 4 690 21 0 0 0 chrX 13789599 13789620 -152860676 + AT_rich Low_complexity Low_complexity 1 21 0 4 690 216 182 0 0 chrX 13789762 13789806 -152860490 + CT-rich Low_complexity Low_complexity 2 45 0 4 690 639 189 27 0 chrX 13789811 13789922 -152860374 - B1_Mur4 SINE Alu -8 142 29 4 690 2095 46 61 0 chrX 13790444 13790706 -152859590 - L1Md_T LINE L1 0 6582 6305 4 690 3843 15 0 0 chrX 13790706 13791176 -152859120 + L1_Mm LINE L1 4956 5425 -458 4 690 7140 75 4 5 chrX 13791287 13792359 -152857937 - L1_Mus2 LINE L1 0 6566 5496 4 690 516 281 7 35 chrX 13792425 13792569 -152857727 + B3 SINE B2 74 213 -3 4 690 736 182 30 0 chrX 13792612 13792744 -152857552 + B1_Mur3 SINE Alu 5 140 -9 4 690 249 119 0 0 chrX 13792751 13792793 -152857503 + (CAA)n Simple_repeat Simple_repeat 1 42 0 4 690 309 325 45 37 chrX 13793824 13793958 -152856338 + ORR1E LTR MaLR 1 135 -224 4 690 644 361 82 75 chrX 13794343 13794732 -152855564 + MLT1G LTR MaLR 33 424 -131 4 690 261 250 54 11 chrX 13794929 13795022 -152855274 - L2c LINE L2 0 3387 3291 4 690 2120 128 67 6 chrX 13795570 13795916 -152854380 + ORR1B2 LTR MaLR 1 367 0 4 690 234 154 0 0 chrX 13795944 13795983 -152854313 + Lx7 LINE L1 5708 5746 -1950 4 690 219 103 0 0 chrX 13795985 13796024 -152854272 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 690 330 226 74 19 chrX 13796045 13796153 -152854143 + Lx9 LINE L1 5779 5892 -1752 4 690 1967 183 16 21 chrX 13796300 13796675 -152853621 - ORR1D1 LTR MaLR 0 374 2 4 690 192 40 0 0 chrX 13797545 13797570 -152852726 + (TTTTTG)n Simple_repeat Simple_repeat 3 27 0 4 690 181 250 25 0 chrX 13797825 13797865 -152852431 - MIRb SINE MIR -13 255 215 4 690 308 287 34 85 chrX 13798228 13798346 -152851950 - PB1D10 SINE Alu -5 112 1 4 690 369 0 0 0 chrX 13799039 13799080 -152851216 + (TTA)n Simple_repeat Simple_repeat 2 42 0 4 690 525 296 93 70 chrX 13799352 13799754 -152850542 - L1ME1 LINE L1 -7 6172 5756 4 690 369 264 1 52 chrX 13800305 13800431 -152849865 - MIRm SINE MIR -21 187 73 4 690 241 344 6 63 chrX 13800489 13800663 -152849633 - Charlie2b DNA MER1_type -4 2778 2615 4 690 345 236 142 6 chrX 13800664 13800826 -152849470 + Lx9 LINE L1 7428 7611 -33 4 690 316 263 129 21 chrX 13800882 13800931 -152849365 - Charlie2b DNA MER1_type -161 2621 2565 4 690 1836 105 24 68 chrX 13800931 13801268 -152849028 - RLTRETN_Mm LTR ERVK 0 322 1 4 690 316 263 129 21 chrX 13801268 13801358 -152848938 - Charlie2b DNA MER1_type -218 2564 2467 4 690 5642 92 20 7 chrX 13801435 13803034 -152847262 + L1VL4 LINE L1 194 1817 -1742 4 690 6386 126 13 21 chrX 13803031 13804414 -152845882 + Lx2 LINE L1 5261 6642 -355 4 690 1285 137 62 0 chrX 13804414 13804625 -152845671 + Lx2 LINE L1 6774 6997 0 4 690 189 0 0 0 chrX 13804675 13804696 -152845600 + (CAGA)n Simple_repeat Simple_repeat 2 22 0 4 690 659 348 75 30 chrX 13804757 13805418 -152844878 - L2a LINE L2 0 3426 2729 4 690 1055 322 111 7 chrX 13805418 13805831 -152844465 + MLT2B1 LTR ERVL 1 456 -64 4 690 517 338 98 49 chrX 13805864 13806110 -152844186 + LTR33 LTR ERVL 29 286 -229 4 690 932 299 136 20 chrX 13806347 13806738 -152843558 - MLT1G1 LTR MaLR -33 546 110 4 690 426 325 37 55 chrX 13806782 13806945 -152843351 - L2a LINE L2 -687 2732 2573 4 690 519 361 87 25 chrX 13807036 13807312 -152842984 - LTR16B2 LTR ERVL -169 293 1 4 690 286 328 246 0 chrX 13807312 13807446 -152842850 - L2a LINE L2 -843 2576 2410 4 690 712 288 154 32 chrX 13807446 13807600 -152842696 - Charlie2b DNA MER1_type -398 2384 2231 4 690 489 62 0 0 chrX 13807600 13807665 -152842631 + (TA)n Simple_repeat Simple_repeat 1 65 0 4 690 712 288 154 32 chrX 13807665 13808048 -152842248 - Charlie2b DNA MER1_type -552 2230 1781 4 690 338 361 38 86 chrX 13808030 13808239 -152842057 - Charlie2b DNA MER1_type -2441 341 143 4 690 262 236 64 28 chrX 13808258 13808367 -152841929 - Charlie2b DNA MER1_type -462 2320 2208 4 690 599 276 75 70 chrX 13808712 13809046 -152841250 - MLT1A1 LTR MaLR -30 335 1 4 690 191 359 96 16 chrX 13809307 13809522 -152840774 + MIR3 SINE MIR 12 247 -21 4 690 477 261 232 9 chrX 13809884 13810112 -152840184 - B4A SINE B4 -12 280 2 4 690 615 314 135 15 chrX 13810154 13810413 -152839883 - B4A SINE B4 -1 291 2 4 690 198 288 33 17 chrX 13810424 13810484 -152839812 - MIR SINE MIR -58 150 90 4 690 441 321 140 45 chrX 13811891 13812155 -152838141 - MLT1C LTR MaLR -6 461 173 4 690 275 255 65 47 chrX 13812174 13812281 -152838015 - MLT1C LTR MaLR -355 112 4 4 690 680 368 108 36 chrX 13812257 13812787 -152837509 + MLT1H1 LTR MaLR 2 555 0 4 690 1096 222 0 5 chrX 13812791 13812981 -152837315 + B3 SINE B2 2 190 -26 4 690 234 0 0 0 chrX 13812985 13813011 -152837285 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 690 889 250 206 9 chrX 13813344 13813659 -152836637 - MER82 DNA MER2_type -276 377 1 4 690 854 273 19 23 chrX 13814706 13814920 -152835376 + ID_B1 SINE B4 4 216 -8 4 690 1508 238 67 21 chrX 13815577 13815998 -152834298 + RMER10A LTR ERVL 1 440 -2 4 690 279 339 96 6 chrX 13816028 13816194 -152834102 + MamRep605 Unknown Unknown 459 639 -237 4 690 3374 221 13 40 chrX 13816258 13817102 -152833194 + Lx7 LINE L1 6544 7364 -332 4 690 227 123 35 110 chrX 13817127 13817300 -152832996 + T-rich Low_complexity Low_complexity 5 164 0 4 690 1350 216 40 30 chrX 13817321 13817650 -152832646 + Lx6 LINE L1 7125 7456 -4 4 690 1786 122 19 32 chrX 13817890 13818204 -152832092 + L1Md_F3 LINE L1 6275 6584 0 4 690 305 188 161 23 chrX 13818287 13818374 -152831922 - MER57C2 LTR ERV1 -288 146 48 4 690 417 243 40 60 chrX 13818611 13818760 -152831536 - MER57-int LTR ERV1 -5 7532 7387 4 690 258 305 26 19 chrX 13818852 13819006 -152831290 - MER57-int LTR ERV1 -232 7305 7151 4 690 1897 195 17 11 chrX 13819167 13819519 -152830777 + ORR1B1 LTR MaLR 41 394 0 4 690 276 30 0 0 chrX 13821017 13821050 -152829246 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 4 690 563 260 38 43 chrX 13821759 13821783 -152828513 + MER5A DNA MER1_type 4 25 -164 4 690 1557 180 29 37 chrX 13821783 13821963 -152828333 - RMER17C LTR ERVK -4 406 235 4 690 801 40 0 0 chrX 13821963 13822064 -152828232 + (GA)n Simple_repeat Simple_repeat 1 101 0 4 690 1557 180 29 37 chrX 13822064 13822292 -152828004 - RMER17C LTR ERVK -176 234 1 4 690 563 260 38 43 chrX 13822292 13822452 -152827844 + MER5A DNA MER1_type 26 187 -2 4 690 2084 38 0 0 chrX 13822670 13822937 -152827359 - L1_Mm LINE L1 -1208 4675 4409 4 690 7959 43 11 0 chrX 13822938 13823901 -152826395 + L1Md_F2 LINE L1 5607 6580 -2 4 690 29198 113 7 10 chrX 13823901 13827135 -152823161 + L1_Mus1 LINE L1 966 4202 -1681 4 690 480 18 0 0 chrX 13827135 13827192 -152823104 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 4 690 29198 110 7 11 chrX 13827192 13828280 -152822016 + L1_Mus1 LINE L1 4203 5291 -592 4 690 1490 115 35 0 chrX 13828280 13828506 -152821790 + L1Md_F2 LINE L1 6349 6582 0 4 690 29198 78 2 4 chrX 13828506 13829803 -152820493 + L1_Mus1 LINE L1 5292 6567 0 4 690 21 0 0 0 chrX 13830142 13830163 -152820133 + AT_rich Low_complexity Low_complexity 1 21 0 4 690 563 178 151 10 chrX 13830239 13830438 -152819858 - Lx9 LINE L1 -18 7626 7400 4 690 1055 348 95 11 chrX 13830862 13831795 -152818501 - L2a LINE L2 -18 3408 2390 4 690 598 303 60 14 chrX 13832260 13832657 -152817639 + MLT1D LTR MaLR 1 503 -2 4 690 472 364 16 52 chrX 13832663 13832912 -152817384 - MIRb SINE MIR -28 240 1 4 690 1568 75 9 17 chrX 13832951 13833181 -152817115 + L1_Mus3 LINE L1 6409 6636 -2 4 690 1622 186 89 46 chrX 13833315 13833522 -152816774 - MTD LTR MaLR -3 416 209 4 690 522 0 0 0 chrX 13833522 13833580 -152816716 + (TTCC)n Simple_repeat Simple_repeat 2 59 0 4 690 989 79 14 0 chrX 13833589 13833729 -152816567 - L1_Mus2 LINE L1 -2 6564 6423 4 690 1622 186 89 46 chrX 13833729 13833905 -152816391 - MTD LTR MaLR -212 207 6 4 690 823 243 21 0 chrX 13835707 13835896 -152814400 - B3A SINE B2 -2 196 4 4 690 205 45 114 0 chrX 13835896 13835940 -152814356 + T-rich Low_complexity Low_complexity 2 50 0 4 690 1493 270 69 77 chrX 13838756 13839473 -152810823 - L1MA7 LINE L1 -113 6178 5426 4 690 985 197 82 5 chrX 13839473 13839667 -152810629 - B3 SINE B2 -7 209 1 4 690 1493 270 69 77 chrX 13839667 13839691 -152810605 - L1M LINE L1 -866 5425 5425 5 690 442 289 99 44 chrX 13839691 13839872 -152810424 - B3A SINE B2 -7 191 1 5 690 1493 270 69 77 chrX 13839872 13839959 -152810337 - L1MA7 LINE L1 -866 5425 5356 4 690 7767 76 29 12 chrX 13840148 13841233 -152809063 - Lx3_Mus LINE L1 0 7009 5907 5 690 222 91 0 0 chrX 13842244 13842277 -152808019 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 690 260 266 54 27 chrX 13842776 13842888 -152807408 + MamGypLTR1b LTR Gypsy 1 115 -667 5 690 188 310 85 17 chrX 13844791 13844850 -152805446 + L2b LINE L2 3313 3375 0 5 690 1169 217 25 20 chrX 13845514 13845759 -152804537 - ORR1D1 LTR MaLR 0 374 129 5 690 773 378 61 19 chrX 13845940 13846302 -152803994 + LTR16C LTR ERVL 76 452 -37 5 690 245 256 83 24 chrX 13847477 13847561 -152802735 + ORSL DNA Tip100 187 275 0 5 690 322 250 0 0 chrX 13847595 13847655 -152802641 - MLT1B LTR MaLR -2 465 406 5 690 838 243 18 76 chrX 13847660 13847883 -152802413 + B3 SINE B2 1 210 -6 5 690 514 318 36 68 chrX 13847925 13848175 -152802121 - MLT1B LTR MaLR -67 323 82 5 690 227 79 26 0 chrX 13848177 13848215 -152802081 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 690 414 338 70 79 chrX 13848424 13848780 -152801516 + ORR1D2 LTR MaLR 18 370 0 5 690 2152 134 59 108 chrX 13849137 13849245 -152801051 + MTC LTR MaLR 1 103 -318 5 690 414 0 0 0 chrX 13849245 13849291 -152801005 + (TATG)n Simple_repeat Simple_repeat 2 47 0 5 690 2152 134 59 108 chrX 13849291 13849625 -152800671 + MTC LTR MaLR 104 421 0 5 690 373 301 145 52 chrX 13849659 13849942 -152800354 + MLT1A1 LTR MaLR 65 402 -6 5 690 477 0 0 0 chrX 13850035 13850088 -152800208 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 690 258 304 12 12 chrX 13851028 13851108 -152799188 + MER5A DNA MER1_type 40 119 -70 5 690 187 259 86 0 chrX 13853235 13853293 -152797003 + MER5A DNA MER1_type 59 121 -68 5 690 228 150 0 91 chrX 13853356 13853400 -152796896 - MER5A DNA MER1_type -11 178 139 5 690 203 250 18 18 chrX 13853429 13853486 -152796810 - MER5A DNA MER1_type -96 93 37 5 690 320 157 0 79 chrX 13853960 13854036 -152796260 - MER44A DNA MER2_type -79 260 190 5 690 390 273 221 12 chrX 13854180 13854343 -152795953 - MER44A DNA MER2_type -131 208 12 5 690 862 297 4 4 chrX 13854680 13854954 -152795342 - L1MC1 LINE L1 -30 6303 6030 5 690 270 0 0 0 chrX 13855394 13855424 -152794872 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 690 607 159 15 0 chrX 13855425 13855557 -152794739 + GA-rich Low_complexity Low_complexity 1 134 0 5 690 263 269 0 154 chrX 13855575 13855685 -152794611 + ID_B1 SINE B4 83 175 -49 5 690 338 257 0 0 chrX 13855618 13855688 -152794608 + PB1D10 SINE Alu 28 97 -20 5 690 209 111 44 0 chrX 13855696 13855741 -152794555 + (TCTCTG)n Simple_repeat Simple_repeat 6 52 0 5 690 374 252 83 15 chrX 13855741 13855874 -152794422 - HAL1-3A_ME LINE L1 -828 2030 1889 5 690 787 300 148 76 chrX 13856621 13856978 -152793318 - MLT1J LTR MaLR -129 383 1 5 690 327 270 115 55 chrX 13857264 13857464 -152792832 + LTR37A LTR ERV1 65 276 -150 5 690 210 298 72 24 chrX 13857725 13857850 -152792446 + MIRb SINE MIR 134 260 -2 5 690 192 77 0 0 chrX 13858329 13858355 -152791941 + (CATA)n Simple_repeat Simple_repeat 3 28 0 5 690 229 388 0 24 chrX 13858452 13858534 -152791762 + ID4_ SINE ID 1 80 -3 5 690 1884 202 26 39 chrX 13860101 13860314 -152789982 + Lx2B LINE L1 6532 6751 -249 5 690 186 43 0 0 chrX 13860314 13860337 -152789959 + (C)n Simple_repeat Simple_repeat 1 23 0 5 690 1884 202 26 39 chrX 13860337 13860586 -152789710 + Lx2B LINE L1 6752 6987 -13 5 690 1369 308 30 4 chrX 13860641 13861136 -152789160 + Lx8 LINE L1 6246 6753 -720 5 690 477 261 143 45 chrX 13861149 13861394 -152788902 + Lx8 LINE L1 7200 7468 -5 5 690 559 245 18 96 chrX 13861903 13862070 -152788226 + MER5B DNA MER1_type 1 154 -24 5 690 24 32 0 0 chrX 13862576 13862607 -152787689 + AT_rich Low_complexity Low_complexity 1 31 0 5 690 201 262 82 0 chrX 13862817 13862878 -152787418 - L2a LINE L2 -4 3422 3357 5 690 210 323 101 67 chrX 13863032 13863211 -152787085 - L2a LINE L2 -258 3168 2984 5 690 413 337 75 40 chrX 13863393 13863594 -152786702 - Tigger12c DNA MER2_type -499 235 28 5 690 582 349 68 36 chrX 13863877 13864156 -152786140 + MLT1H LTR MaLR 17 304 -245 5 690 371 307 107 66 chrX 13864403 13864470 -152785826 + L3 LINE CR1 4170 4240 -249 5 690 1722 224 68 10 chrX 13864470 13864866 -152785430 - MTD LTR MaLR 0 419 1 5 690 371 307 107 66 chrX 13864866 13865087 -152785209 + L3 LINE CR1 4241 4470 -19 5 690 4074 249 16 14 chrX 13865373 13866316 -152783980 + Lx6 LINE L1 6347 7291 -169 5 690 414 0 0 0 chrX 13867879 13867925 -152782371 + (A)n Simple_repeat Simple_repeat 1 46 0 5 690 307 367 0 0 chrX 13868287 13868385 -152781911 + MLT1G LTR MaLR 77 174 -375 5 690 587 261 0 70 chrX 13868391 13868519 -152781777 - B1_Mur1 SINE Alu -1 119 1 5 690 248 317 42 121 chrX 13868519 13868580 -152781716 - MT2B2 LTR ERVL -431 153 106 5 690 317 350 82 54 chrX 13868556 13868740 -152781556 + MLT1G LTR MaLR 206 394 -197 5 690 228 313 16 73 chrX 13868760 13868884 -152781412 + MLT1G LTR MaLR 425 541 -8 5 690 525 303 50 84 chrX 13868952 13869273 -152781023 + LTR78 LTR ERV1 941 1250 -54 5 690 1033 131 23 0 chrX 13869324 13869500 -152780796 - L1_Mur2 LINE L1 -1489 4388 4209 5 690 922 264 55 38 chrX 13869977 13870375 -152779921 - L1MA4 LINE L1 -21 6279 5875 5 690 262 264 91 11 chrX 13870375 13870463 -152779833 - MIRb SINE MIR -128 140 46 5 690 204 97 0 0 chrX 13870955 13870986 -152779310 + (TTA)n Simple_repeat Simple_repeat 2 32 0 5 690 416 304 0 0 chrX 13870996 13871108 -152779188 - PB1D10 SINE Alu -5 112 1 5 690 732 158 33 29 chrX 13871673 13871845 -152778451 - RLTR9C LTR ERVK 0 393 147 5 690 2659 153 65 0 chrX 13871846 13872337 -152777959 + L1Md_F LINE L1 231 753 -5766 5 690 11472 79 1 7 chrX 13872337 13873975 -152776321 + L1Md_F2 LINE L1 3948 5575 -308 5 690 7052 81 28 2 chrX 13873976 13874935 -152775361 + L1Md_F2 LINE L1 5587 6570 -12 5 690 792 206 28 51 chrX 13874982 13875197 -152775099 - RLTR9C LTR ERVK -183 210 1 5 690 22 0 0 0 chrX 13875493 13875515 -152774781 + AT_rich Low_complexity Low_complexity 1 22 0 5 690 1531 225 64 48 chrX 13875991 13876364 -152773932 - MTEa LTR MaLR 0 379 1 5 690 495 0 0 0 chrX 13876379 13876434 -152773862 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 690 421 152 20 61 chrX 13876447 13876474 -152773822 - Lx7 LINE L1 -248 7448 7427 5 690 2245 143 62 8 chrX 13876474 13876848 -152773448 - ORR1B1 LTR MaLR 0 394 1 5 690 421 152 20 61 chrX 13876848 13876918 -152773378 - Lx7 LINE L1 -270 7426 7355 5 690 180 0 0 0 chrX 13876939 13876959 -152773337 + (TAAAAA)n Simple_repeat Simple_repeat 6 25 0 5 690 401 365 14 0 chrX 13877149 13877294 -152773002 + L1MDb LINE L1 134 280 -6129 5 690 2110 156 21 31 chrX 13877300 13877729 -152772567 - ORR1B2 LTR MaLR 0 384 1 5 690 379 288 0 16 chrX 13877922 13878071 -152772225 + L1MC LINE L1 5587 5732 -442 5 690 1395 272 131 48 chrX 13878203 13879133 -152771163 + L1MD2 LINE L1 5329 6335 -24 5 690 267 31 0 0 chrX 13879142 13879174 -152771122 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 690 884 198 0 0 chrX 13880227 13880384 -152769912 - MERVL_2A-int LTR ERVL -1877 3884 3728 5 690 10908 160 26 15 chrX 13880378 13881022 -152769274 - MERVL_2A-int LTR ERVL -2846 2915 2262 5 690 3495 111 42 11 chrX 13881022 13881567 -152768729 + LTRIS2 LTR ERV1 3 564 0 5 690 10908 160 26 15 chrX 13881567 13882885 -152767411 - MERVL_2A-int LTR ERVL -3500 2261 931 5 690 687 293 91 51 chrX 13882904 13883335 -152766961 - Lx9 LINE L1 -1088 6556 6109 5 690 285 237 0 0 chrX 13883428 13883487 -152766809 - L1MA5 LINE L1 -376 5924 5866 5 690 23550 128 8 16 chrX 13883497 13886979 -152763317 - L1_Mus3 LINE L1 -3 6635 3133 5 690 279 0 0 0 chrX 13886979 13887010 -152763286 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 690 23550 146 11 20 chrX 13887010 13887327 -152762969 - L1_Mus3 LINE L1 -2751 3132 2826 5 690 1204 35 14 0 chrX 13887327 13887472 -152762824 - B1_Mus2 SINE Alu 0 147 1 5 690 23550 146 11 20 chrX 13887472 13887520 -152762776 - L1_Mus3 LINE L1 -3058 2825 2779 5 690 1256 34 0 0 chrX 13887520 13887666 -152762630 + B1_Mm SINE Alu 2 147 0 5 690 23550 146 11 20 chrX 13887666 13887718 -152762578 - L1_Mus3 LINE L1 -3105 2778 2775 5 690 1910 105 28 22 chrX 13887718 13888038 -152762258 + RLTRETN_Mm LTR ERVK 1 322 0 5 690 23550 126 8 29 chrX 13888038 13890166 -152760130 - L1_Mus3 LINE L1 -3109 2774 486 5 690 377 313 145 30 chrX 13890281 13890404 -152759892 + Lx9 LINE L1 7222 7343 -301 5 690 243 0 0 0 chrX 13890404 13890431 -152759865 + (GA)n Simple_repeat Simple_repeat 1 27 0 5 690 377 313 145 30 chrX 13890431 13890548 -152759748 + Lx9 LINE L1 7344 7499 -145 5 690 336 48 0 0 chrX 13890548 13890590 -152759706 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 690 377 313 145 30 chrX 13890590 13890714 -152759582 + Lx9 LINE L1 7500 7629 -15 5 690 307 278 40 163 chrX 13890944 13891146 -152759150 - MLT1A1 LTR MaLR -230 178 2 5 690 24 77 0 0 chrX 13891302 13891354 -152758942 + AT_rich Low_complexity Low_complexity 1 52 0 5 690 263 26 51 0 chrX 13892211 13892250 -152758046 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 5 690 1476 70 0 0 chrX 13892530 13892717 -152757579 - U2 snRNA snRNA -1 187 1 5 690 297 302 71 28 chrX 13892793 13893004 -152757292 - Charlie23a DNA MER1_type -10 329 110 5 691 2031 126 13 96 chrX 13894739 13895116 -152755180 + ORR1B1 LTR MaLR 41 386 -8 5 691 368 316 9 9 chrX 13895270 13895385 -152754911 - MER2B DNA MER2_type -220 116 2 5 691 22 0 0 0 chrX 13895392 13895414 -152754882 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 230 312 145 28 chrX 13895424 13895569 -152754727 - LTR33 LTR ERVL -6 509 348 5 691 563 285 48 5 chrX 13896093 13896301 -152753995 - Charlie13a DNA Charlie -56 1458 1242 5 691 234 62 0 0 chrX 13897435 13897467 -152752829 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 5 691 694 277 0 0 chrX 13897468 13897609 -152752687 - ID_B1 SINE B4 -1 223 83 5 691 350 42 21 0 chrX 13897620 13897668 -152752628 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 691 265 399 48 28 chrX 13898297 13898586 -152751710 + L2a LINE L2 1930 2224 -1195 5 691 187 378 97 27 chrX 13898722 13899021 -152751275 + L2a LINE L2 3107 3426 0 5 691 1094 53 0 0 chrX 13899084 13899217 -152751079 + B1_Mm SINE Alu 3 135 -12 5 691 243 79 0 0 chrX 13899225 13899263 -152751033 + (A)n Simple_repeat Simple_repeat 1 38 0 5 691 684 320 108 32 chrX 13899276 13899683 -152750613 - Charlie13a DNA Charlie -415 1099 662 5 691 421 285 200 10 chrX 13899785 13899869 -152750427 + Lx9 LINE L1 7103 7203 -441 5 691 4815 135 59 10 chrX 13899869 13900665 -152749631 + Lx2B LINE L1 6166 7000 0 5 691 421 285 200 10 chrX 13900665 13900775 -152749521 + Lx9 LINE L1 7204 7333 -311 5 691 616 306 122 15 chrX 13901025 13901483 -152748813 + L1M4 LINE L1 3886 4392 -1754 5 691 411 73 0 0 chrX 13901609 13901664 -152748632 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 691 721 257 26 0 chrX 13901666 13901818 -152748478 - B3A SINE B2 -41 157 2 5 691 201 74 0 0 chrX 13902901 13902928 -152747368 + (TAA)n Simple_repeat Simple_repeat 1 27 0 6 691 508 314 39 91 chrX 13902949 13903180 -152747116 + MLT1D LTR MaLR 211 429 -76 6 691 205 318 44 53 chrX 13904253 13904366 -152745930 - L2c LINE L2 -4 3383 3272 6 691 292 347 0 39 chrX 13904657 13904759 -152745537 - MLT1H2 LTR MaLR -303 186 89 6 691 390 42 0 0 chrX 13904778 13904826 -152745470 + (TAA)n Simple_repeat Simple_repeat 2 49 0 6 691 287 340 165 16 chrX 13905081 13905275 -152745021 - MLT1L LTR MaLR -383 227 5 6 691 2501 162 30 106 chrX 13905432 13905991 -152744305 + RLTR11A LTR ERVK 12 528 0 6 691 183 397 142 13 chrX 13905991 13906307 -152743989 - L2c LINE L2 -339 3080 2724 6 691 6872 65 6 1 chrX 13906311 13907206 -152743090 + L1Md_F2 LINE L1 4688 5586 -297 6 691 7317 66 16 12 chrX 13907207 13908198 -152742098 + L1Md_F2 LINE L1 5588 6582 0 6 691 318 345 156 48 chrX 13908326 13908846 -152741450 - L2c LINE L2 -805 2614 2039 6 691 21 0 0 0 chrX 13908993 13909014 -152741282 + AT_rich Low_complexity Low_complexity 1 21 0 6 691 24 53 0 0 chrX 13909146 13909184 -152741112 + AT_rich Low_complexity Low_complexity 1 38 0 6 691 498 319 30 12 chrX 13909557 13909722 -152740574 + MIR SINE MIR 20 187 -75 6 691 2082 256 48 13 chrX 13910718 13911372 -152738924 - Lx9 LINE L1 -564 7080 6357 6 691 257 51 0 25 chrX 13911382 13911422 -152738874 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 691 1044 224 70 13 chrX 13911671 13912010 -152738286 - L1MB3 LINE L1 -3 6180 5816 6 691 536 244 132 69 chrX 13912119 13912153 -152738143 - MTD LTR MaLR 0 419 389 6 691 7389 37 11 0 chrX 13912153 13913036 -152737260 + RLTR13B1 LTR ERVK 1 893 0 6 691 536 259 311 48 chrX 13913036 13913259 -152737037 - MTD LTR MaLR -31 388 101 6 691 275 311 107 102 chrX 13913453 13913668 -152736628 + RMER15 LTR ERVL 344 559 -16 6 691 21 36 0 0 chrX 13914213 13914241 -152736055 + AT_rich Low_complexity Low_complexity 1 28 0 6 691 1368 69 21 11 chrX 13914578 13914769 -152735527 + B2_Mm2 SINE B2 1 193 -2 6 691 333 0 0 0 chrX 13914872 13914909 -152735387 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 691 318 26 0 0 chrX 13915528 13915567 -152734729 + (TC)n Simple_repeat Simple_repeat 1 39 0 6 691 399 127 0 0 chrX 13915567 13915629 -152734667 + (CA)n Simple_repeat Simple_repeat 1 63 0 6 691 678 224 179 5 chrX 13915730 13915914 -152734382 - B3 SINE B2 0 216 1 6 691 861 247 47 5 chrX 13915953 13916144 -152734152 + MTE2b LTR MaLR 3 201 -178 6 691 1696 147 116 22 chrX 13916145 13916500 -152733796 - RLTR25B LTR ERVK -1 1102 715 6 691 391 166 15 22 chrX 13916500 13916636 -152733660 + CT-rich Low_complexity Low_complexity 4 138 0 6 691 1361 51 0 6 chrX 13916637 13916816 -152733480 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 6 691 6959 97 70 0 chrX 13916816 13917921 -152732375 - Lx LINE L1 -12 6642 5473 6 691 2994 193 76 16 chrX 13917921 13918549 -152731747 - RLTR25B LTR ERVK -356 672 7 6 691 738 286 67 4 chrX 13918609 13918848 -152731448 + Lx7 LINE L1 7040 7293 -403 6 691 251 312 0 0 chrX 13918864 13918992 -152731304 + T-rich Low_complexity Low_complexity 1 128 0 6 691 22 0 0 0 chrX 13919101 13919123 -152731173 + AT_rich Low_complexity Low_complexity 1 22 0 6 691 595 215 83 0 chrX 13919178 13919299 -152730997 + MTE2b LTR MaLR 247 377 -2 6 691 502 252 23 97 chrX 13920089 13920361 -152729935 + L1VL1 LINE L1 233 485 -5933 6 691 384 252 90 35 chrX 13920384 13920528 -152729768 + L1Md_F LINE L1 578 729 -5790 6 691 1157 176 13 4 chrX 13920509 13920738 -152729558 + L1Md_F LINE L1 628 858 -5661 6 691 653 152 0 0 chrX 13920738 13920837 -152729459 + L1_Mus1 LINE L1 409 507 -6131 6 691 7510 118 102 43 chrX 13920833 13923409 -152726887 + L1_Mus1 LINE L1 639 3596 -2287 6 691 8047 99 3 3 chrX 13923408 13925284 -152725012 + L1_Mus1 LINE L1 4693 6567 0 6 691 278 288 80 9 chrX 13925425 13925537 -152724759 + MLT1H-int LTR MaLR 183 302 -1085 6 691 256 340 19 37 chrX 13925906 13926013 -152724283 - MLT1L LTR MaLR -344 266 162 6 691 253 221 73 0 chrX 13926564 13926632 -152723664 + Lx5 LINE L1 6302 6374 -676 6 691 1167 295 76 68 chrX 13926623 13927150 -152723146 + Lx5 LINE L1 6479 7009 -41 6 691 356 353 26 13 chrX 13927178 13927330 -152722966 + MLT1H LTR MaLR 91 244 -305 6 691 721 270 11 22 chrX 13927380 13927562 -152722734 - B3A SINE B2 -18 180 1 6 691 580 277 143 14 chrX 13928127 13928350 -152721946 - MER2 DNA MER2_type -1 344 93 6 691 369 294 43 116 chrX 13928709 13928916 -152721380 + LTR16A LTR ERVL 73 307 -144 6 691 224 130 37 0 chrX 13929231 13929285 -152721011 + A-rich Low_complexity Low_complexity 1 56 0 6 691 343 327 64 29 chrX 13929290 13929463 -152720833 + LTR16A LTR ERVL 271 449 -2 6 691 241 308 18 46 chrX 13930268 13930377 -152719919 + MIRb SINE MIR 95 200 -68 6 691 230 184 202 38 chrX 13930753 13930832 -152719464 - MLT1A1 LTR MaLR -16 392 301 6 691 265 290 62 46 chrX 13931010 13931140 -152719156 - MLT1A1 LTR MaLR -274 134 3 6 691 271 291 35 117 chrX 13931174 13931345 -152718951 + MLT1B LTR MaLR 65 221 -169 6 691 281 188 0 28 chrX 13931736 13931807 -152718489 + GA-rich Low_complexity Low_complexity 1 69 0 6 691 2447 74 42 0 chrX 13934533 13934870 -152715426 + L1_Mus3 LINE L1 6286 6636 -2 6 691 686 264 9 103 chrX 13934881 13935113 -152715183 + B3 SINE B2 2 211 -5 6 691 247 282 67 103 chrX 13935131 13935237 -152715059 + L1MC5 LINE L1 7133 7233 -728 6 691 375 23 0 0 chrX 13935237 13935281 -152715015 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 691 247 282 67 103 chrX 13935281 13935474 -152714822 + L1MC5 LINE L1 7234 7421 -540 6 691 18227 76 27 6 chrX 13935780 13937730 -152712566 - L1VL4 LINE L1 0 3559 1552 6 691 260 27 0 26 chrX 13937730 13937768 -152712528 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 6 691 18227 84 17 5 chrX 13937768 13939090 -152711206 - L1VL4 LINE L1 -2008 1551 230 6 691 180 111 0 0 chrX 13939963 13939990 -152710306 + (GAAA)n Simple_repeat Simple_repeat 3 29 0 6 691 326 245 67 58 chrX 13940728 13940832 -152709464 + PB1D9 SINE Alu 3 107 -13 6 691 419 0 0 19 chrX 13940834 13940886 -152709410 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 6 691 414 0 0 0 chrX 13940908 13940954 -152709342 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 691 189 0 0 0 chrX 13940954 13940974 -152709322 + (CA)n Simple_repeat Simple_repeat 1 21 0 6 691 269 322 0 53 chrX 13940979 13941074 -152709222 + MLT1A0 LTR MaLR 53 142 -223 6 691 1331 276 120 2 chrX 13941095 13941646 -152708650 + L1MA6 LINE L1 5667 6282 -18 6 691 406 294 200 17 chrX 13941651 13941831 -152708465 + MLT1A0 LTR MaLR 124 336 -29 6 691 2098 90 3 0 chrX 13941831 13942120 -152708176 - L1_Mus3 LINE L1 -365 6273 5984 6 691 1566 86 13 4 chrX 13942120 13942355 -152707941 + L1_Mus3 LINE L1 6398 6634 -4 6 691 402 377 20 35 chrX 13942407 13942605 -152707691 - MLT1E1A LTR MaLR -71 609 415 6 691 180 0 0 0 chrX 13942657 13942677 -152707619 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 6 691 278 26 0 25 chrX 13942715 13942755 -152707541 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 6 691 650 140 0 29 chrX 13942755 13942849 -152707447 - B1_Mur2 SINE Alu -14 135 42 6 691 263 279 50 61 chrX 13942775 13942874 -152707422 - B4 SINE B4 -88 204 107 6 691 325 320 32 19 chrX 13943067 13943223 -152707073 + L1M5 LINE L1 4559 4716 -1430 6 691 484 91 23 0 chrX 13943315 13943403 -152706893 + (TTTTG)n Simple_repeat Simple_repeat 1 90 0 6 691 1189 48 7 0 chrX 13943413 13943558 -152706738 - B1_Mm SINE Alu -1 146 1 6 691 272 287 18 54 chrX 13943558 13943713 -152706583 - L1MCa LINE L1 -4696 1812 1664 6 691 318 306 89 9 chrX 13943692 13943916 -152706380 - L1M5 LINE L1 -2988 3158 2917 6 691 402 320 68 47 chrX 13944093 13944305 -152705991 - MLT1E1A LTR MaLR -20 370 160 6 691 26 0 0 0 chrX 13944305 13944331 -152705965 + AT_rich Low_complexity Low_complexity 1 26 0 6 691 183 100 0 0 chrX 13944364 13944394 -152705902 + (CAGA)n Simple_repeat Simple_repeat 2 31 0 6 691 388 305 17 8 chrX 13944394 13944513 -152705783 - RSINE1 SINE B4 -44 121 2 6 691 329 294 121 25 chrX 13944513 13944643 -152705653 - MLT1B LTR MaLR -202 188 44 6 691 565 283 102 17 chrX 13944668 13944987 -152705309 - L1MEf LINE L1 -3650 3684 3107 6 691 1577 317 65 27 chrX 13945197 13945904 -152704392 - Lx8 LINE L1 -5 7468 6735 6 691 310 221 73 0 chrX 13945920 13945988 -152704308 - B3A SINE B2 -121 77 5 6 691 293 279 50 0 chrX 13946003 13946143 -152704153 - L1MEf LINE L1 -5121 1981 1835 6 691 655 331 78 13 chrX 13946184 13946455 -152703841 - L1MEf LINE L1 -5332 1770 1475 6 691 378 0 0 0 chrX 13946455 13946497 -152703799 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 691 655 331 78 13 chrX 13946497 13946599 -152703697 - L1MEf LINE L1 -5628 1474 1373 6 691 876 20 0 0 chrX 13946606 13946708 -152703588 + (TCTCC)n Simple_repeat Simple_repeat 5 106 0 6 691 425 66 16 0 chrX 13946718 13946779 -152703517 + (TC)n Simple_repeat Simple_repeat 2 63 0 6 691 342 248 25 42 chrX 13947155 13947273 -152703023 - L1MEf LINE L1 -6034 1068 953 6 691 2862 178 24 7 chrX 13947375 13947924 -152702372 - Lx4B LINE L1 -5 7053 6496 6 691 374 355 72 100 chrX 13948403 13948682 -152701614 + MLT1I LTR MaLR 135 405 -6 6 691 862 229 56 38 chrX 13949174 13949387 -152700909 - MTE2a LTR MaLR -2 377 161 6 691 3054 141 40 31 chrX 13949384 13949903 -152700393 - RMER19A LTR ERVK -65 672 149 6 691 1581 179 3 3 chrX 13949903 13950194 -152700102 - L1_Mur1 LINE L1 -705 5181 4891 6 691 7663 100 14 3 chrX 13950175 13951605 -152698691 + L1_Mus4 LINE L1 5171 6616 -20 6 691 1091 114 62 3 chrX 13951605 13951781 -152698515 - RMER19A LTR ERVK -566 171 1 6 691 392 351 83 18 chrX 13951812 13952041 -152698255 - MIRb SINE MIR -24 244 1 6 691 399 317 16 24 chrX 13952122 13952248 -152698048 + MER58A DNA MER1_type 65 189 -35 6 691 3516 255 44 2 chrX 13952313 13953221 -152697075 - RCHARR1 DNA MER1_type -25 949 4 6 691 10347 119 50 20 chrX 13953708 13955308 -152694988 + L1_Mur2 LINE L1 433 2111 -3766 6 691 351 0 0 0 chrX 13955308 13955347 -152694949 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 691 10347 116 61 11 chrX 13955347 13956327 -152693969 + L1_Mur2 LINE L1 2112 3103 -2774 6 691 380 282 118 32 chrX 13956560 13956747 -152693549 + L1M5 LINE L1 2874 3076 -3070 6 691 32210 98 11 11 chrX 13956773 13963156 -152687140 - L1Md_F2 LINE L1 -21 6561 184 6 691 827 336 38 8 chrX 13963494 13963758 -152686538 + B4A SINE B4 3 274 -18 6 691 21 0 0 0 chrX 13963811 13963832 -152686464 + AT_rich Low_complexity Low_complexity 1 21 0 6 691 238 286 13 0 chrX 13964082 13964159 -152686137 + MADE2 DNA Mariner 3 80 0 6 691 953 251 56 42 chrX 13964899 13965186 -152685110 - B4A SINE B4 0 292 2 6 691 343 287 127 124 chrX 13965374 13965737 -152684559 - MLT1D LTR MaLR -32 358 21 6 691 5536 80 6 1 chrX 13965847 13966576 -152683720 - L1_Mus2 LINE L1 -1 6565 5834 6 691 3167 101 2 2 chrX 13966577 13967044 -152683252 + L1_Mm LINE L1 4205 4671 -1212 6 691 368 279 97 49 chrX 13967060 13967327 -152682969 + L1M5 LINE L1 4970 5249 -897 6 691 309 277 114 15 chrX 13967380 13967512 -152682784 + L1M5 LINE L1 5341 5485 -755 6 691 32 57 0 0 chrX 13968046 13968099 -152682197 + AT_rich Low_complexity Low_complexity 1 53 0 6 691 681 257 133 28 chrX 13969102 13969455 -152680841 - Lx5 LINE L1 -133 6158 5769 7 691 823 322 45 30 chrX 13969542 13969945 -152680351 - Lx9 LINE L1 -199 7445 7037 7 691 2053 276 53 62 chrX 13969995 13971451 -152678845 - Lx5 LINE L1 -2 7056 5285 7 691 4636 244 54 68 chrX 13971726 13973509 -152676787 - L1M2 LINE L1 -914 5229 3472 7 691 728 259 128 7 chrX 13973502 13973604 -152676692 - L1M2 LINE L1 -3105 3038 2923 7 691 585 52 0 0 chrX 13973604 13973681 -152676615 + (TG)n Simple_repeat Simple_repeat 2 78 0 7 691 728 259 128 7 chrX 13973681 13973874 -152676422 - L1M2 LINE L1 -3221 2922 2708 7 691 243 328 91 45 chrX 13973918 13974128 -152676168 + MIR SINE MIR 40 267 -9 7 691 699 281 130 0 chrX 13974817 13975063 -152675233 - L1MC1 LINE L1 -5 6328 6051 7 691 241 233 122 14 chrX 13975634 13975708 -152674588 + B2_Mm2 SINE B2 3 84 -111 7 691 545 260 76 8 chrX 13975644 13975776 -152674520 + RSINE1 SINE B4 13 153 -12 7 691 3095 162 23 35 chrX 13975839 13976850 -152673446 + L1Md_F LINE L1 219 1149 -5485 7 691 877 170 31 0 chrX 13976819 13976978 -152673318 + L1VL1 LINE L1 161 324 -6098 7 691 9841 89 3 0 chrX 13976984 13978518 -152671778 + L1Md_F LINE L1 1077 2616 -3267 7 691 2707 81 0 0 chrX 13978515 13978900 -152671396 + L1Md_F LINE L1 3078 3462 -2421 7 691 33125 68 4 16 chrX 13978906 13984325 -152665971 + L1Md_F2 LINE L1 233 5584 -299 7 691 7038 93 8 10 chrX 13984327 13985313 -152664983 + L1Md_F2 LINE L1 5587 6570 -12 7 691 9126 108 25 9 chrX 13985380 13987486 -152662810 - L1_Mm LINE L1 -3316 2567 427 7 691 1847 62 4 0 chrX 13987484 13987727 -152662569 + L1_Mm LINE L1 2574 2817 -3066 7 691 4558 17 0 0 chrX 13987725 13988250 -152662046 + L1Md_T LINE L1 5062 5586 -297 7 691 8967 6 0 0 chrX 13988250 13989246 -152661050 + L1Md_T LINE L1 5587 6582 0 7 691 977 89 0 0 chrX 13989254 13989389 -152660907 + L1_Mm LINE L1 2711 2845 -3038 7 691 865 63 31 0 chrX 13989389 13989516 -152660780 - L1Md_A LINE L1 0 6582 6452 7 691 21644 98 46 19 chrX 13989516 13994385 -152655911 - L1Md_F LINE L1 -541 5342 99 7 691 21350 79 5 22 chrX 13994387 13998077 -152652219 + L1Md_F2 LINE L1 2837 6455 -127 7 691 1068 68 0 0 chrX 13998083 13998229 -152652067 + (GAAA)n Simple_repeat Simple_repeat 1 146 0 7 691 268 296 157 34 chrX 13999851 13999999 -152650297 + MIR SINE MIR 46 218 -50 7 691 364 335 70 19 chrX 14000525 14000683 -152649613 - MLT1G LTR MaLR -408 183 18 1 691 348 83 0 0 chrX 14001016 14001064 -152649232 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 2 691 2331 123 3 5 chrX 14001064 14001423 -152648873 - Lx3A LINE L1 -14 6967 6610 3 691 189 0 0 0 chrX 14001737 14001758 -152648538 + (A)n Simple_repeat Simple_repeat 1 21 0 4 691 381 86 0 0 chrX 14001953 14002011 -152648285 + (GA)n Simple_repeat Simple_repeat 1 58 0 5 691 687 295 155 55 chrX 14002179 14002656 -152647640 + MER34A1 LTR ERV1 57 581 -6 6 691 23687 84 21 11 chrX 14002793 14007362 -152642934 - Lx3_Mus LINE L1 0 7009 2387 7 691 33365 95 12 4 chrX 14007367 14013508 -152636788 - L1Md_F2 LINE L1 -12 6570 387 8 691 1081 74 0 69 chrX 14013511 14013670 -152636626 - B1_Mus1 SINE Alu 0 148 1 9 691 286 312 114 18 chrX 14013972 14014086 -152636210 - MIRb SINE MIR -62 206 82 1 691 577 261 75 22 chrX 14014843 14015158 -152635138 + MER33 DNA MER1_type 7 323 -1 1 691 449 290 24 90 chrX 14015708 14015920 -152634376 - B3A SINE B2 -6 210 13 1 691 383 318 38 16 chrX 14016401 14016670 -152633626 - L1MD3 LINE L1 -58 6121 5853 1 691 266 311 142 53 chrX 14016687 14016754 -152633542 - MT2A LTR ERVL -322 211 5 1 691 316 287 89 8 chrX 14016754 14016877 -152633419 - MTE2a LTR MaLR -242 137 5 1 691 343 295 50 68 chrX 14016983 14017205 -152633091 - ETnERV2-int LTR ERVK -369 7848 7631 1 691 1330 130 19 0 chrX 14017207 14017415 -152632881 + RLTR45-int LTR ERVK 5696 5907 -1337 1 691 1062 125 38 19 chrX 14017435 14017641 -152632655 + RLTR45-int LTR ERVK 5894 6071 -1173 1 691 514 220 6 0 chrX 14017643 14017811 -152632485 + RLTR45-int LTR ERVK 7506 7645 -572 1 691 504 259 18 0 chrX 14017820 14017932 -152632364 - B1_Mur2 SINE Alu -35 114 1 1 691 3226 154 117 86 chrX 14018108 14018918 -152631378 - RLTR45-int LTR ERVK -1519 5725 4891 2 691 190 223 131 122 chrX 14018919 14019026 -152631270 + L4 LINE RTE 691 798 -1231 2 691 2828 120 26 2 chrX 14019026 14019444 -152630852 - RLTR45-int LTR ERVK -3218 4188 3761 2 691 1193 235 66 21 chrX 14019490 14019777 -152630519 - RLTR45-int LTR ERVK -4653 2753 2454 2 691 562 146 118 0 chrX 14019790 14019900 -152630396 - RMER16-int LTR ERVK -5077 1060 938 2 691 2088 170 156 47 chrX 14019905 14020418 -152629878 - RMER16-int LTR ERVK -4587 819 251 2 691 330 292 34 20 chrX 14020601 14020748 -152629548 - RMER16-int LTR ERVK -6915 329 181 2 691 646 252 15 0 chrX 14021312 14021443 -152628853 - ETnERV2-int LTR ERVK -204 7202 7070 1 691 445 271 29 72 chrX 14021494 14021701 -152628595 - L1MD3 LINE L1 -397 5782 5585 1 691 189 0 0 0 chrX 14021722 14021743 -152628553 + (T)n Simple_repeat Simple_repeat 1 21 0 2 691 283 181 14 14 chrX 14021817 14021890 -152628406 + CT-rich Low_complexity Low_complexity 1 73 0 2 691 1541 288 133 45 chrX 14021926 14022955 -152627341 - L1MD3 LINE L1 -745 5439 4263 1 691 825 252 24 5 chrX 14022955 14023162 -152627134 + B3 SINE B2 1 211 -5 2 691 1541 289 150 47 chrX 14023162 14023813 -152626483 - L1MD3 LINE L1 -1884 4262 3591 1 691 225 0 0 0 chrX 14023817 14023842 -152626454 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 2 691 1179 275 132 33 chrX 14023857 14024499 -152625797 - L1MC LINE L1 -2199 3947 3242 2 691 328 338 0 0 chrX 14024507 14024658 -152625638 - L1MC LINE L1 -3060 3086 2936 2 86 458 291 69 27 chrX 14024648 14024899 -152625397 - L1M5 LINE L1 -1679 4467 4206 2 692 18639 160 20 65 chrX 14025584 14030361 -152619935 - Lx LINE L1 -3 6651 2113 2 692 37285 48 8 7 chrX 14030359 14036511 -152613785 - L1Md_F2 LINE L1 0 6582 440 3 692 6211 98 22 13 chrX 14036504 14038243 -152612053 - L1VL4 LINE L1 -1780 1779 21 3 692 279 0 0 0 chrX 14038282 14038313 -152611983 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 692 795 75 0 0 chrX 14038313 14038432 -152611864 + (GA)n Simple_repeat Simple_repeat 1 120 0 3 692 430 347 15 10 chrX 14038522 14038723 -152611573 - Lx8 LINE L1 -302 7171 6970 3 692 636 284 105 30 chrX 14039595 14039795 -152610501 + ID_B1 SINE B4 10 224 0 3 692 766 191 35 0 chrX 14040368 14040509 -152609787 - B1_Mus2 SINE Alu -1 146 1 3 692 935 324 119 40 chrX 14040527 14041029 -152609267 - MER44B DNA MER2_type -1 549 8 3 692 303 335 91 26 chrX 14041040 14041270 -152609026 - MamGypLTR3 LTR Gypsy -60 779 535 3 692 232 316 66 33 chrX 14041690 14041811 -152608485 + Tigger16b DNA Tigger 162 286 -51 3 692 1012 294 131 45 chrX 14041850 14042270 -152608026 - MLT1D LTR MaLR -21 484 29 4 692 1448 192 58 14 chrX 14042565 14042860 -152607436 + Lx5 LINE L1 6742 7049 -1 4 692 215 325 70 19 chrX 14043684 14043815 -152606481 + MIRc SINE MIR 1 145 -123 4 692 264 303 20 29 chrX 14043936 14044038 -152606258 - L1MEg LINE L1 -5071 1129 1029 4 692 324 83 0 0 chrX 14044091 14044139 -152606157 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 692 608 282 0 74 chrX 14044142 14044318 -152605978 - RSINE1 SINE B4 0 165 3 4 692 415 282 73 101 chrX 14044337 14044625 -152605671 - L1MEg LINE L1 -5138 1062 783 4 692 252 0 0 0 chrX 14044978 14045006 -152605290 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 4 692 316 344 84 48 chrX 14045019 14045434 -152604862 - L1MEg LINE L1 -5604 490 61 4 692 231 318 90 9 chrX 14045799 14045910 -152604386 + MIRb SINE MIR 90 209 -59 4 692 192 339 23 46 chrX 14046071 14046201 -152604095 + MER5A DNA MER1_type 55 181 -8 4 692 663 254 54 34 chrX 14046721 14046925 -152603371 - B3 SINE B2 0 216 9 4 692 225 0 0 0 chrX 14046940 14046965 -152603331 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 5 692 16819 92 6 0 chrX 14047058 14050069 -152600227 - L1_Mus1 LINE L1 0 6567 3541 5 692 1523 100 96 4 chrX 14050069 14050329 -152599967 - RLTR10A LTR ERVK -7 404 121 5 692 7512 128 2 80 chrX 14050384 14050855 -152599441 - L1_Mm LINE L1 -1916 3970 3505 5 692 2564 69 10 1 chrX 14050855 14051201 -152599095 + IAPEY2_LTR LTR ERVK 1 467 -8 5 692 7512 128 2 80 chrX 14051201 14052326 -152597970 - L1_Mm LINE L1 -1916 3504 2388 5 692 517 315 115 29 chrX 14052327 14052536 -152597760 - B4 SINE B4 -63 229 3 5 692 363 304 122 42 chrX 14053433 14053606 -152596690 + MLT1D LTR MaLR 317 487 -18 5 692 392 358 120 22 chrX 14053727 14054044 -152596252 - ORR1E LTR MaLR -11 348 1 5 692 26533 112 46 9 chrX 14057684 14063714 -152586582 + L1_Mus1 LINE L1 304 6567 0 5 692 252 0 0 0 chrX 14063760 14063788 -152586508 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 692 465 258 58 116 chrX 14063792 14064016 -152586280 - LTR37B LTR ERV1 -203 265 55 6 692 249 33 0 0 chrX 14064381 14064411 -152585885 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 6 692 690 122 0 0 chrX 14064413 14064520 -152585776 + (GGGA)n Simple_repeat Simple_repeat 3 109 0 6 692 477 329 47 47 chrX 14064520 14064692 -152585604 - MER63A DNA AcHobo -38 172 1 6 692 286 367 67 62 chrX 14064789 14064998 -152585298 + LTR88b LTR Gypsy? 168 377 -460 6 692 415 291 39 0 chrX 14065447 14065550 -152584746 - PB1D10 SINE Alu -7 110 4 6 692 2632 45 6 0 chrX 14065867 14066200 -152584096 - L1Md_F2 LINE L1 0 6582 6248 6 692 9545 42 2 0 chrX 14066353 14069062 -152581234 + L1Md_Gf LINE L1 66 2331 -3884 6 692 1312 269 203 33 chrX 14069230 14070038 -152580258 - Charlie2b DNA MER1_type -63 2719 1775 6 692 423 358 99 42 chrX 14070028 14070340 -152579956 - Charlie2b DNA MER1_type -2452 330 1 6 692 534 237 55 33 chrX 14070362 14070545 -152579751 + MER53 DNA hAT 5 191 -2 6 692 239 0 0 31 chrX 14070569 14070601 -152579695 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 692 218 324 142 14 chrX 14071046 14071187 -152579109 + L2 LINE L2 2841 2999 -420 7 692 21 0 0 0 chrX 14071282 14071303 -152578993 + AT_rich Low_complexity Low_complexity 1 21 0 7 692 251 351 52 15 chrX 14071539 14071557 -152578739 - MT2A LTR ERVL -392 141 1 7 692 475 256 25 8 chrX 14071557 14071675 -152578621 - MTE2b LTR MaLR -259 120 1 7 692 404 247 19 85 chrX 14071680 14071786 -152578510 - MTEa LTR MaLR -280 99 1 7 692 426 291 85 0 chrX 14071907 14072048 -152578248 - RMER15 LTR ERVL -1 574 422 7 692 1175 135 65 42 chrX 14072155 14072372 -152577924 - URR1A DNA MER1_type -4 222 1 7 692 682 390 78 10 chrX 14072846 14073258 -152577038 - LTR16A LTR ERVL -9 442 3 7 692 369 58 0 0 chrX 14073473 14073525 -152576771 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 692 2244 292 73 16 chrX 14073729 14074659 -152575637 + Lx9 LINE L1 6454 7436 -208 8 692 13572 123 209 18 chrX 14075566 14080721 -152569575 - L1Md_F2 LINE L1 -2 6580 268 8 692 415 381 11 23 chrX 14080734 14080911 -152569385 + LTR16C LTR ERVL 44 218 -271 8 692 439 335 66 25 chrX 14080925 14081121 -152569175 + LTR16C LTR ERVL 286 489 0 8 692 574 296 85 0 chrX 14083519 14083708 -152566588 + MER3 DNA MER1_type 4 208 -1 8 692 492 62 0 0 chrX 14084097 14084161 -152566135 + (TA)n Simple_repeat Simple_repeat 2 65 0 8 692 207 0 0 0 chrX 14084247 14084270 -152566026 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 692 775 280 28 22 chrX 14084477 14084656 -152565640 + B3A SINE B2 3 182 -16 8 692 204 279 72 72 chrX 14085105 14085244 -152565052 - L2c LINE L2 -15 3372 3234 8 692 1043 112 0 0 chrX 14085790 14085933 -152564363 + B1_Mus1 SINE Alu 1 143 -5 8 692 287 104 21 0 chrX 14085933 14085981 -152564315 + (GAAAA)n Simple_repeat Simple_repeat 4 52 0 8 692 261 83 0 0 chrX 14085979 14086015 -152564281 + (GGA)n Simple_repeat Simple_repeat 2 37 0 9 692 588 264 33 28 chrX 14086370 14086504 -152563792 + L1MB1 LINE L1 5941 6074 -94 9 692 3231 53 5 0 chrX 14086504 14086898 -152563398 - MTA_Mm LTR MaLR 0 396 1 9 692 8377 49 41 0 chrX 14086898 14087953 -152562343 - MTA_Mm-int LTR MaLR 0 1098 1 9 692 3375 38 2 0 chrX 14087953 14088348 -152561948 - MTA_Mm LTR MaLR 0 396 1 9 692 588 264 33 28 chrX 14088348 14088425 -152561871 + L1MB1 LINE L1 6075 6153 -15 9 692 2446 202 65 18 chrX 14088722 14089321 -152560975 + Lx2B LINE L1 6366 6992 -8 9 692 320 43 22 0 chrX 14089474 14089520 -152560776 + (TC)n Simple_repeat Simple_repeat 1 47 0 9 692 306 0 0 0 chrX 14089520 14089554 -152560742 + (TA)n Simple_repeat Simple_repeat 1 34 0 9 692 1129 190 45 5 chrX 14089560 14089761 -152560535 + RMER15 LTR ERVL 367 575 0 9 692 306 315 61 19 chrX 14089895 14090071 -152560225 + L2c LINE L2 3088 3292 -95 9 692 580 320 85 20 chrX 14090459 14090800 -152559496 + Lx7 LINE L1 328 690 -7038 9 692 1993 115 41 21 chrX 14090849 14091187 -152559109 + IAPEY_LTR LTR ERVK 41 385 0 9 692 4867 169 18 7 chrX 14091187 14092133 -152558163 + IAPEY3-int LTR ERVK 1 956 -6724 9 692 16297 61 8 1 chrX 14092122 14094265 -152556031 + IAPEY3-int LTR ERVK 4046 6204 -1476 9 692 33045 76 3 14 chrX 14094265 14100425 -152549871 - L1Md_F2 LINE L1 -2 6580 489 1 692 8672 91 18 7 chrX 14100425 14101725 -152548571 + IAPEY3-int LTR ERVK 6200 7513 0 9 692 1968 113 37 15 chrX 14101725 14102049 -152548247 + IAPEY_LTR LTR ERVK 55 385 0 1 692 3108 188 19 23 chrX 14102055 14102756 -152547540 + Lx7 LINE L1 2174 2871 -3009 9 692 6284 176 91 55 chrX 14102742 14103629 -152546667 + Lx7 LINE L1 4258 5233 -647 9 692 384 22 0 0 chrX 14103629 14103674 -152546622 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 1 692 6284 176 91 55 chrX 14103674 14104018 -152546278 + Lx7 LINE L1 5234 5593 -287 9 692 486 0 0 0 chrX 14104018 14104072 -152546224 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 692 6284 204 71 37 chrX 14104072 14104669 -152545627 + Lx7 LINE L1 5594 6150 -1546 9 692 1628 168 67 75 chrX 14104669 14105056 -152545240 - ORR1C2 LTR MaLR 0 384 1 1 692 3358 241 46 14 chrX 14105056 14105459 -152544837 + Lx7 LINE L1 6151 6553 -1143 9 692 347 268 18 30 chrX 14105686 14105855 -152544441 + L1MA4 LINE L1 5758 5924 -376 1 692 209 320 30 45 chrX 14105883 14106058 -152544238 + MIR SINE MIR 82 258 -10 1 692 23 33 0 0 chrX 14106143 14106173 -152544123 + AT_rich Low_complexity Low_complexity 1 30 0 1 692 27040 118 19 7 chrX 14107343 14113488 -152536808 - L1_Mus3 LINE L1 -3 6635 419 1 692 3095 55 19 0 chrX 14115524 14115941 -152534355 - L1Md_F2 LINE L1 -420 6162 5738 1 692 2989 66 10 5 chrX 14115941 14116335 -152533961 + L1Md_F2 LINE L1 6177 6572 -10 1 692 452 283 27 14 chrX 14116356 14116503 -152533793 + MLT2C1 LTR ERVL 115 263 -134 1 692 324 382 66 28 chrX 14116613 14116826 -152533470 + LTR33 LTR ERVL 285 505 -10 1 692 240 286 0 0 chrX 14117070 14117119 -152533177 - tRNA-Leu-CTY tRNA tRNA -36 49 1 1 692 272 315 92 9 chrX 14117122 14117231 -152533065 + MIR SINE MIR 143 260 -2 1 692 260 300 18 75 chrX 14117809 14117946 -152532350 - MLT1K LTR MaLR -4 591 428 1 692 629 401 35 16 chrX 14120214 14120528 -152529768 + LTR16A LTR ERVL 84 403 -48 1 692 241 355 0 11 chrX 14120696 14120790 -152529506 + (TG)n Simple_repeat Simple_repeat 2 94 0 1 692 21 0 0 0 chrX 14121578 14121599 -152528697 + AT_rich Low_complexity Low_complexity 1 21 0 1 692 180 0 0 0 chrX 14122198 14122218 -152528078 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 692 562 311 85 64 chrX 14122625 14123014 -152527282 - MLT2C1 LTR ERVL 0 397 1 1 692 478 308 102 7 chrX 14123048 14123195 -152527101 + RSINE1 SINE B4 5 165 0 1 692 1511 239 167 11 chrX 14123388 14123844 -152526452 - MT2A LTR ERVL -6 527 1 1 692 514 282 53 41 chrX 14124147 14124413 -152525883 + L1MB8 LINE L1 5908 6176 -2 1 692 321 248 106 75 chrX 14124901 14125062 -152525234 - MER5A1 DNA MER1_type 0 166 1 1 692 1107 94 0 0 chrX 14125713 14125893 -152524403 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 692 255 61 0 0 chrX 14125893 14125926 -152524370 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 692 658 332 13 53 chrX 14125929 14126155 -152524141 - B4 SINE B4 -27 265 49 1 692 3149 90 21 40 chrX 14126144 14126620 -152523676 - MT2C_Mm LTR ERVL -8 467 1 1 692 356 143 48 0 chrX 14126622 14126685 -152523611 - B4 SINE B4 -226 66 1 1 692 232 323 32 0 chrX 14126882 14126975 -152523321 - Lx8 LINE L1 -1577 5896 5801 1 692 181 196 36 0 chrX 14127017 14127073 -152523223 + (TATATG)n Simple_repeat Simple_repeat 6 63 0 1 692 227 192 26 40 chrX 14128853 14128929 -152521367 - MER97c DNA MER1_type? -521 569 495 1 692 216 0 0 0 chrX 14128929 14128953 -152521343 + (T)n Simple_repeat Simple_repeat 1 24 0 1 692 1225 48 0 0 chrX 14128953 14129099 -152521197 - B1_Mm SINE Alu 0 147 2 1 692 1061 303 105 21 chrX 14129099 14129565 -152520731 - MER97c DNA MER1_type? -582 508 4 1 692 236 307 90 35 chrX 14129755 14129900 -152520396 + Charlie5 DNA MER1_type 1473 1625 -999 1 692 279 250 0 19 chrX 14131224 14131277 -152519019 - B1_Mus2 SINE Alu -92 55 4 1 692 798 163 77 50 chrX 14131281 14131462 -152518834 - B2_Mm2 SINE B2 -9 186 1 1 692 485 330 16 68 chrX 14131602 14132044 -152518252 + L1ME3A LINE L1 5566 5984 -189 1 692 243 0 0 0 chrX 14132221 14132248 -152518048 + (GTTTG)n Simple_repeat Simple_repeat 2 28 0 1 692 288 0 0 0 chrX 14132849 14132881 -152517415 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 692 735 243 20 31 chrX 14133365 14133539 -152516757 - B3A SINE B2 -34 161 1 1 692 382 306 46 46 chrX 14135590 14135915 -152514381 + L1MA4 LINE L1 5552 5876 -424 1 692 887 192 140 9 chrX 14136235 14136456 -152513840 - RLTR17 LTR ERVK 0 692 443 1 692 296 209 21 21 chrX 14136527 14136620 -152513676 + L1M2 LINE L1 2110 2202 -3941 1 692 423 38 0 0 chrX 14136673 14136726 -152513570 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 692 25 31 0 0 chrX 14136830 14136862 -152513434 + AT_rich Low_complexity Low_complexity 1 32 0 1 692 27 49 0 0 chrX 14136886 14136927 -152513369 + AT_rich Low_complexity Low_complexity 1 41 0 1 692 31036 76 10 4 chrX 14137096 14140335 -152509961 + L1Md_F2 LINE L1 484 3759 -2124 1 692 1550 48 16 0 chrX 14140335 14140524 -152509772 + B2_Mm1t SINE B2 2 193 0 1 692 31036 73 2 5 chrX 14140524 14142368 -152507928 + L1Md_F2 LINE L1 3760 5586 -297 1 692 8026 49 1 4 chrX 14142368 14143367 -152506929 + L1Md_F2 LINE L1 5587 6582 0 1 692 366 122 20 10 chrX 14143452 14143551 -152506745 + T-rich Low_complexity Low_complexity 3 102 0 1 692 424 241 9 0 chrX 14143553 14143661 -152506635 + L1M2 LINE L1 2250 2358 -3785 1 692 216 236 18 0 chrX 14143790 14143845 -152506451 + (TA)n Simple_repeat Simple_repeat 1 56 0 1 692 319 257 35 9 chrX 14143856 14143970 -152506326 + L1M2 LINE L1 2469 2585 -3558 1 692 535 304 147 15 chrX 14143971 14144379 -152505917 + L1MA6 LINE L1 5792 6253 -47 1 692 274 331 12 90 chrX 14144889 14145000 -152505296 + Tigger14a DNA MER2_type 26 130 -194 1 692 1133 158 44 49 chrX 14145000 14145226 -152505070 + URR1A DNA MER1_type 2 226 0 1 692 274 331 12 90 chrX 14145226 14145280 -152505016 + Tigger14a DNA MER2_type 131 178 -146 1 692 4933 134 4 4 chrX 14145550 14146471 -152503825 + Lx2B LINE L1 4995 5923 -1077 1 692 7036 57 5 1 chrX 14146470 14147414 -152502882 + L1Md_F2 LINE L1 4531 5478 -405 1 692 33705 36 2 0 chrX 14147403 14154566 -152495730 + L1Md_T LINE L1 1 5589 -297 1 692 8948 7 0 4 chrX 14154566 14155566 -152494730 + L1Md_T LINE L1 5590 6585 0 1 692 1040 59 0 0 chrX 14155566 14155702 -152494594 + L1Md_F2 LINE L1 5450 5585 -298 1 86 8345 36 2 2 chrX 14155704 14156699 -152493597 + L1Md_F2 LINE L1 5588 6582 0 1 693 6059 139 56 8 chrX 14156700 14157738 -152492558 + Lx2B LINE L1 5911 6998 -2 1 693 399 360 14 37 chrX 14159770 14159986 -152490310 + L2a LINE L2 2689 2899 -520 1 693 228 317 84 12 chrX 14160229 14160312 -152489984 + L2a LINE L2 3318 3406 -20 1 693 2169 286 107 52 chrX 14160349 14161406 -152488890 + Lx9 LINE L1 6309 7423 -221 1 693 396 0 0 0 chrX 14161430 14161474 -152488822 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 693 261 0 0 0 chrX 14161802 14161831 -152488465 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 693 223 254 48 0 chrX 14161900 14161963 -152488333 - B2_Mm2 SINE B2 -116 79 14 1 693 272 228 0 0 chrX 14162081 14162160 -152488136 + L1MA8 LINE L1 5351 5429 -868 1 693 8074 79 1 16 chrX 14162159 14163503 -152486793 + L1Md_Gf LINE L1 1 1142 -5380 1 693 15988 22 0 0 chrX 14165999 14167864 -152482432 + L1Md_T LINE L1 3722 5586 -297 1 693 8420 34 0 0 chrX 14167864 14168860 -152481436 + L1Md_T LINE L1 5587 6582 0 1 693 1639 269 109 20 chrX 14168877 14169676 -152480620 + L1MA8 LINE L1 5419 6288 -3 1 693 650 200 19 19 chrX 14169684 14169842 -152480454 + L1MC3 LINE L1 7614 7771 -14 1 693 289 344 36 31 chrX 14170550 14170745 -152479551 + Tigger5 DNA MER2_type 52 247 -2159 1 693 531 0 0 0 chrX 14170835 14170894 -152479402 + (TTTTA)n Simple_repeat Simple_repeat 3 61 0 1 693 1026 59 0 29 chrX 14170894 14171034 -152479262 - B1_Mus1 SINE Alu -12 136 1 1 693 356 302 107 64 chrX 14171105 14171526 -152478770 - L1ME3A LINE L1 -68 6105 5667 1 693 309 307 114 64 chrX 14171588 14171807 -152478489 + MIRb SINE MIR 39 268 0 1 693 22 0 0 0 chrX 14172196 14172218 -152478078 + AT_rich Low_complexity Low_complexity 1 22 0 1 693 290 288 113 22 chrX 14173744 14173925 -152476371 + MIRc SINE MIR 42 236 -32 1 693 548 277 46 46 chrX 14174647 14174844 -152475452 + B3 SINE B2 3 199 -17 1 693 189 107 0 0 chrX 14174850 14174878 -152475418 + (TCTCTG)n Simple_repeat Simple_repeat 2 29 0 1 693 591 85 0 0 chrX 14174881 14174963 -152475333 + (TCTA)n Simple_repeat Simple_repeat 3 84 0 1 693 653 229 0 59 chrX 14175409 14175562 -152474734 + B3A SINE B2 2 145 -53 1 693 420 71 0 0 chrX 14175562 14175618 -152474678 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 693 594 41 0 0 chrX 14175618 14175690 -152474606 + (GA)n Simple_repeat Simple_repeat 2 74 0 1 693 385 317 19 0 chrX 14175755 14175859 -152474437 + PB1D10 SINE Alu 7 112 -5 1 693 327 25 0 0 chrX 14176507 14176547 -152473749 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 693 414 0 0 0 chrX 14176547 14176592 -152473704 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 693 21 36 0 0 chrX 14176910 14176938 -152473358 + AT_rich Low_complexity Low_complexity 1 28 0 1 693 1526 207 114 16 chrX 14177305 14177577 -152472719 - RMER4B LTR ERVK -9 576 255 1 693 180 77 0 0 chrX 14177577 14177603 -152472693 + (CAG)n Simple_repeat Simple_repeat 3 28 0 1 693 1526 212 111 19 chrX 14177603 14177823 -152472473 - RMER4B LTR ERVK -331 254 1 1 693 399 165 19 21 chrX 14178126 14178220 -152472076 + ORR1D2 LTR MaLR 4 92 -267 1 693 231 88 0 0 chrX 14178258 14178292 -152472004 + (TTATG)n Simple_repeat Simple_repeat 4 37 0 1 693 306 106 0 0 chrX 14178980 14179027 -152471269 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 693 938 284 122 76 chrX 14179036 14179577 -152470719 - MLT1F1 LTR MaLR -3 566 1 1 693 430 253 44 0 chrX 14179661 14179752 -152470544 - PB1D10 SINE Alu -2 115 21 1 693 22 0 0 0 chrX 14180401 14180423 -152469873 + AT_rich Low_complexity Low_complexity 1 22 0 1 693 233 200 50 0 chrX 14181063 14181123 -152469173 + CT-rich Low_complexity Low_complexity 1 63 0 1 693 594 221 0 0 chrX 14181613 14181749 -152468547 + CT-rich Low_complexity Low_complexity 3 138 0 1 693 279 54 0 0 chrX 14182940 14182977 -152467319 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 693 642 332 54 5 chrX 14182982 14183185 -152467111 - Tigger7 DNA MER2_type -2270 221 9 1 693 1164 285 34 46 chrX 14183696 14184109 -152466187 - MTE2a LTR MaLR -14 405 4 1 693 297 304 134 0 chrX 14184109 14184221 -152466075 - MIRc SINE MIR -71 197 71 1 693 459 342 8 67 chrX 14184559 14184797 -152465499 - MER58A DNA MER1_type 0 224 1 1 693 225 344 89 0 chrX 14185271 14185361 -152464935 + ORR1E LTR MaLR 1 98 -281 1 693 323 283 81 145 chrX 14185415 14185570 -152464726 + ORR1E LTR MaLR 70 226 -133 1 693 1965 117 106 57 chrX 14185570 14186023 -152464273 + IAPLTR2_Mm LTR ERVK 1 475 0 1 693 323 283 81 145 chrX 14186023 14186177 -152464119 + ORR1E LTR MaLR 227 359 0 1 693 485 346 64 30 chrX 14187032 14187267 -152463029 + LTR16A LTR ERVL 7 249 -202 2 693 232 299 90 13 chrX 14187357 14187435 -152462861 + LTR16A LTR ERVL 360 443 -8 2 693 404 267 100 40 chrX 14188597 14188847 -152461449 + RMER10A LTR ERVL 128 392 -50 2 693 798 41 0 0 chrX 14189003 14189101 -152461195 + (CTTTG)n Simple_repeat Simple_repeat 2 99 0 2 693 1129 51 0 0 chrX 14189101 14189239 -152461057 - B1_Mus1 SINE Alu -10 138 1 2 693 234 0 0 0 chrX 14190193 14190219 -152460077 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 2 693 403 335 35 47 chrX 14190464 14190633 -152459663 + MER58B DNA MER1_type 174 340 -1 2 693 21 89 0 0 chrX 14190682 14190738 -152459558 + AT_rich Low_complexity Low_complexity 1 56 0 2 693 989 283 0 12 chrX 14191070 14191324 -152458972 - MER2 DNA MER2_type -8 337 87 2 693 4479 116 31 14 chrX 14192172 14192904 -152457392 + RMER17B LTR ERVK 1 745 -213 2 693 875 222 119 30 chrX 14193665 14193934 -152456362 + BGLII_B LTR ERVK 19 311 -130 2 693 9762 38 5 0 chrX 14193946 14195843 -152454453 - L1Md_F3 LINE L1 -14 6570 4666 2 693 308 133 0 0 chrX 14195836 14195881 -152454415 + L1_Mm LINE L1 4586 4630 -1253 2 693 723 261 73 87 chrX 14195881 14196260 -152454036 + RLTR31_Mur LTR ERVK 201 531 -22 2 693 234 0 0 0 chrX 14196260 14196286 -152454010 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2 693 2057 119 34 12 chrX 14196414 14196736 -152453560 + ORR1A4 LTR MaLR 1 329 0 2 693 893 267 36 80 chrX 14197170 14197609 -152452687 + L1MA6 LINE L1 5517 5936 -364 2 693 273 340 124 7 chrX 14199093 14199238 -152451058 - Lx9 LINE L1 -1645 5999 5838 2 693 580 291 103 16 chrX 14199265 14199450 -152450846 - B4 SINE B4 -89 203 3 2 693 551 384 59 4 chrX 14201660 14201898 -152448398 + LTR16C LTR ERVL 9 259 -230 2 693 295 283 92 86 chrX 14201935 14202058 -152448238 + LTR16C LTR ERVL 315 444 -45 2 693 3206 145 50 120 chrX 14202058 14202715 -152447581 + RMER19C LTR ERVK 1 611 0 2 693 295 283 92 86 chrX 14202715 14202765 -152447531 + LTR16C LTR ERVL 445 489 0 2 693 365 252 77 17 chrX 14203951 14204068 -152446228 - L2a LINE L2 0 3426 3303 2 693 944 169 191 0 chrX 14204240 14204429 -152445867 - URR1B DNA MER1_type 0 225 1 2 693 252 59 0 0 chrX 14205126 14205160 -152445136 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 693 228 67 0 0 chrX 14205260 14205290 -152445006 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 693 265 335 114 51 chrX 14205402 14205578 -152444718 + LTR78 LTR ERV1 114 300 -1004 2 693 282 29 0 0 chrX 14206176 14206211 -152444085 + (A)n Simple_repeat Simple_repeat 1 35 0 2 693 599 337 62 32 chrX 14206333 14206673 -152443623 - Tigger9a DNA Tigger -7 725 376 2 693 204 216 0 0 chrX 14206688 14206725 -152443571 + CT-rich Low_complexity Low_complexity 3 39 0 2 693 216 0 0 0 chrX 14206764 14206788 -152443508 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 693 357 300 81 60 chrX 14207282 14207629 -152442667 + ORR1E LTR MaLR 8 359 -20 2 693 894 209 28 19 chrX 14207662 14207876 -152442420 + B3 SINE B2 1 216 0 2 693 362 292 116 7 chrX 14207945 14208083 -152442213 + MER57D LTR ERV1 194 346 -65 2 693 3076 231 19 11 chrX 14208498 14209175 -152441121 + Lx5 LINE L1 6043 7047 -3 2 693 285 360 59 53 chrX 14209369 14209390 -152440906 + MIRb SINE MIR 80 100 -168 2 693 5057 132 48 18 chrX 14209390 14210266 -152440030 + RLTR13D6 LTR ERVK 1 902 0 2 693 285 360 59 53 chrX 14210266 14210414 -152439882 + MIRb SINE MIR 101 249 -19 2 693 731 370 34 43 chrX 14210474 14210799 -152439497 - MLT1I LTR MaLR 0 411 90 2 693 225 65 0 0 chrX 14210980 14211011 -152439285 + (T)n Simple_repeat Simple_repeat 1 31 0 2 693 180 0 0 0 chrX 14211133 14211153 -152439143 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 2 693 424 250 32 8 chrX 14211180 14211305 -152438991 + Lx9 LINE L1 7359 7486 -158 2 693 183 100 0 0 chrX 14211316 14211346 -152438950 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 693 26 30 0 0 chrX 14211432 14211465 -152438831 + AT_rich Low_complexity Low_complexity 1 33 0 2 693 413 230 21 18 chrX 14211467 14211609 -152438687 + L1_Rod LINE L1 5245 5444 -847 2 693 519 270 32 0 chrX 14211675 14211801 -152438495 + RSINE1 SINE B4 2 131 -34 2 693 182 65 65 0 chrX 14211828 14211859 -152438437 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2 693 317 86 17 0 chrX 14212247 14212305 -152437991 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 2 693 443 361 105 16 chrX 14212917 14213221 -152437075 + L2c LINE L2 3040 3370 -17 2 693 206 324 45 80 chrX 14213457 14213575 -152436721 + MIR SINE MIR 49 168 -108 2 693 899 341 86 17 chrX 14213639 14214107 -152436189 + MLT1G1 LTR MaLR 72 571 -8 2 693 2337 114 142 19 chrX 14214109 14214538 -152435758 + RLTR45 LTR ERVK 1 482 0 2 693 241 341 98 35 chrX 14215326 14215469 -152434827 + MIR SINE MIR 74 225 -37 2 693 291 294 25 25 chrX 14216454 14216576 -152433720 + MLT1A LTR MaLR 235 356 -18 2 693 233 191 0 21 chrX 14218837 14218885 -152431411 + MLT1A LTR MaLR 362 408 0 2 693 306 343 148 5 chrX 14219174 14219391 -152430905 + L3b LINE CR1 13 260 -222 2 693 236 307 53 0 chrX 14219844 14219919 -152430377 - Tigger5 DNA MER2_type -2327 79 1 2 693 276 207 67 124 chrX 14220167 14220272 -152430024 - MLT1H2 LTR MaLR -4 485 387 2 693 287 276 82 52 chrX 14220442 14220576 -152429720 - LTR16A LTR ERVL -66 385 248 2 693 375 23 0 0 chrX 14220941 14220985 -152429311 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 693 6452 149 30 3 chrX 14220985 14222582 -152427714 - Lx LINE L1 -13 6641 4999 2 693 9475 143 2 1 chrX 14222578 14224125 -152426171 + L1_Mur2 LINE L1 3453 5000 -877 2 693 427 347 101 57 chrX 14224125 14224461 -152425835 + ORR1E LTR MaLR 4 354 -5 2 693 23 0 0 0 chrX 14224909 14224932 -152425364 + AT_rich Low_complexity Low_complexity 1 23 0 2 693 232 314 57 33 chrX 14225648 14225770 -152424526 + MIR SINE MIR 133 257 -5 2 693 534 330 68 42 chrX 14225943 14226223 -152424073 - LTR16B1 LTR ERVL -55 408 126 2 693 11367 132 24 30 chrX 14226723 14229330 -152420966 + L1Md_F LINE L1 312 2908 -2975 2 693 1104 75 0 0 chrX 14229371 14229518 -152420778 + B1_Mus1 SINE Alu 1 147 -1 2 693 231 114 0 0 chrX 14229518 14229562 -152420734 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 2 693 560 256 86 53 chrX 14229670 14229890 -152420406 - MER34A LTR ERV1 -7 580 356 2 693 926 292 70 7 chrX 14230479 14230779 -152419517 - MTD LTR MaLR -2 417 99 2 693 244 132 0 0 chrX 14230794 14230832 -152419464 + ID4_ SINE ID 8 45 -38 2 693 853 271 38 144 chrX 14231486 14231908 -152418388 - MTE2a LTR MaLR 0 379 3 2 693 419 328 115 4 chrX 14232353 14232622 -152417674 + L1MEg LINE L1 1082 1380 -4704 2 693 610 258 95 74 chrX 14232633 14232918 -152417378 - MLT1E1A LTR MaLR -8 672 382 2 693 356 226 116 20 chrX 14233132 14233249 -152417047 + B1F2 SINE Alu 4 129 -20 2 693 518 217 55 28 chrX 14233446 14233555 -152416741 + B1F SINE Alu 37 148 -1 2 693 287 182 30 0 chrX 14233921 14233987 -152416309 + CT-rich Low_complexity Low_complexity 2 69 0 2 693 300 111 0 0 chrX 14233972 14234017 -152416279 + (T)n Simple_repeat Simple_repeat 1 45 0 2 693 1144 57 0 0 chrX 14234019 14234159 -152416137 - B1_Mus1 SINE Alu -7 141 2 2 693 1394 223 51 24 chrX 14234603 14234934 -152415362 + ORR1D1 LTR MaLR 1 340 -34 2 693 2196 76 12 19 chrX 14235266 14235586 -152414710 + L1_Mus3 LINE L1 6318 6635 -3 2 693 227 306 141 10 chrX 14236657 14236756 -152413540 - B1F1 SINE Alu -36 113 2 2 693 257 250 67 40 chrX 14236765 14236840 -152413456 + MLT1D LTR MaLR 115 191 -314 2 693 389 311 35 56 chrX 14236841 14236984 -152413312 + B1F2 SINE Alu 1 140 -9 2 693 285 167 62 33 chrX 14237096 14237168 -152413128 - MLT1E3 LTR MaLR -26 654 534 2 693 4246 173 59 62 chrX 14237215 14238102 -152412194 + RMER19B LTR ERVK 1 884 -18 2 693 241 379 80 43 chrX 14238157 14238184 -152412112 - MLT1E3 LTR MaLR -210 470 443 2 693 2391 150 21 0 chrX 14238184 14238570 -152411726 + ORR1B1 LTR MaLR 1 394 0 2 693 241 379 80 43 chrX 14238570 14238680 -152411616 - MLT1E3 LTR MaLR -238 442 328 2 693 1058 279 25 35 chrX 14238728 14239010 -152411286 - B4A SINE B4 -12 280 2 2 693 627 208 10 106 chrX 14239213 14239412 -152410884 + L1MA9 LINE L1 6006 6185 -127 2 693 337 324 9 0 chrX 14239491 14239599 -152410697 - Tigger5 DNA MER2_type -1 2405 2297 2 693 507 279 60 26 chrX 14239588 14239701 -152410595 - Tigger5 DNA MER2_type -2249 157 49 2 693 3231 48 10 2 chrX 14239701 14240098 -152410198 - MTB LTR MaLR 0 400 1 2 693 507 279 60 26 chrX 14240098 14240135 -152410161 - Tigger5 DNA MER2_type -2358 48 3 2 693 349 254 38 69 chrX 14240390 14240505 -152409791 - MLT1E1A LTR MaLR -253 400 298 2 693 511 271 37 74 chrX 14241917 14242080 -152408216 - LTR16C LTR ERVL -263 226 70 2 693 207 0 0 0 chrX 14242421 14242444 -152407852 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 693 610 252 7 0 chrX 14243436 14243575 -152406721 + L1M4 LINE L1 5554 5693 -485 2 693 988 100 169 0 chrX 14243584 14243744 -152406552 - B2_Mm2 SINE B2 -8 187 1 2 693 20753 103 4 12 chrX 14243773 14247691 -152402605 - L1_Mus4 LINE L1 -2 6634 2751 2 693 617 238 71 84 chrX 14247707 14247932 -152402364 - MLT1B LTR MaLR -5 385 164 2 693 381 283 169 28 chrX 14248118 14248296 -152402000 + MLT1H1 LTR MaLR 322 524 -31 2 693 394 383 79 28 chrX 14248304 14248594 -152401702 - L1M5 LINE L1 -606 5634 5330 2 693 348 24 0 0 chrX 14248611 14248652 -152401644 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 693 5212 211 47 51 chrX 14248724 14249780 -152400516 + Lx7 LINE L1 6455 7486 -210 2 693 387 0 0 0 chrX 14249780 14249823 -152400473 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 693 5212 211 47 51 chrX 14249823 14250013 -152400283 + Lx7 LINE L1 7487 7695 -1 2 693 1129 302 17 3 chrX 14250163 14250452 -152399844 - MTE2b LTR MaLR -86 293 1 3 693 413 48 16 16 chrX 14250825 14250888 -152399408 + ORR1C1 LTR MaLR 1 63 -315 3 693 613 114 19 0 chrX 14250912 14251017 -152399279 + (TTC)n Simple_repeat Simple_repeat 1 107 0 3 693 6785 120 7 11 chrX 14251017 14252057 -152398239 - Lx2A LINE L1 -1 7007 5973 3 693 1484 166 15 117 chrX 14252057 14252398 -152397898 - ORR1B1 LTR MaLR -48 346 41 3 693 1297 138 147 58 chrX 14252405 14252491 -152397805 + ORR1C2 LTR MaLR 67 160 -224 3 693 549 0 0 0 chrX 14252491 14252552 -152397744 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 693 1297 138 147 58 chrX 14252552 14252757 -152397539 + ORR1C2 LTR MaLR 161 383 -1 3 693 405 39 0 0 chrX 14253514 14253565 -152396731 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 693 417 189 0 0 chrX 14254145 14254235 -152396061 + (CA)n Simple_repeat Simple_repeat 2 91 0 3 693 508 217 8 8 chrX 14254339 14254460 -152395836 - L1_Mur3 LINE L1 -1305 4575 4455 3 693 881 252 15 0 chrX 14254510 14254716 -152395580 - B3 SINE B2 -7 209 1 3 693 634 302 142 31 chrX 14254718 14255362 -152394934 - L1M2 LINE L1 -427 5453 4746 3 693 42 0 0 0 chrX 14255651 14255693 -152394603 + AT_rich Low_complexity Low_complexity 1 42 0 3 693 989 232 64 74 chrX 14255693 14256112 -152394184 - Lx9 LINE L1 -15 7629 7215 3 693 214 122 26 51 chrX 14256939 14257017 -152393279 + A-rich Low_complexity Low_complexity 3 78 0 3 693 420 97 0 0 chrX 14257001 14257063 -152393233 + (GAAA)n Simple_repeat Simple_repeat 2 63 0 3 693 633 267 0 62 chrX 14257064 14257240 -152393056 + Lx9 LINE L1 6405 6569 -1075 3 693 3392 143 43 8 chrX 14257268 14257460 -152392836 + RLTR17 LTR ERVK 1 197 -495 3 693 210 37 0 0 chrX 14257460 14257487 -152392809 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 693 3392 143 43 8 chrX 14257487 14257880 -152392416 + RLTR17 LTR ERVK 198 605 -87 3 693 215 196 0 80 chrX 14258346 14258396 -152391900 - PB1D9 SINE Alu -7 113 68 3 693 1638 236 69 11 chrX 14258775 14259151 -152391145 + MTD LTR MaLR 8 405 -14 3 693 490 317 49 18 chrX 14260565 14260817 -152389479 + MuRRS4-int LTR ERV1 1292 1742 -6036 3 693 384 227 2 151 chrX 14261072 14261271 -152389025 + MT2B LTR ERVL 90 257 -327 3 693 1025 67 0 0 chrX 14261179 14261313 -152388983 + B1_Mus2 SINE Alu 11 144 -3 3 693 922 324 58 30 chrX 14261369 14261942 -152388354 + MuRRS4-int LTR ERV1 2161 2749 -2314 3 693 852 289 86 33 chrX 14261968 14262143 -152388153 + MuRRS4-int LTR ERV1 3701 3882 -1181 3 693 2327 123 62 16 chrX 14262143 14262530 -152387766 + RLTR44A LTR ERVK 1 405 0 3 693 852 289 86 33 chrX 14262530 14262658 -152387638 + MuRRS4-int LTR ERV1 3883 4019 -1044 3 693 339 302 112 12 chrX 14263463 14263624 -152386672 + MuRRS4-int LTR ERV1 4663 4839 -224 3 693 480 18 0 0 chrX 14264757 14264814 -152385482 + (TG)n Simple_repeat Simple_repeat 1 57 0 3 693 2526 7 0 0 chrX 14264882 14265165 -152385131 - L1Md_T LINE L1 0 6582 6300 3 693 522 291 66 80 chrX 14265512 14265858 -152384438 + MTEa LTR MaLR 3 377 -2 3 693 189 0 0 0 chrX 14265985 14266006 -152384290 + (T)n Simple_repeat Simple_repeat 1 21 0 3 693 780 338 31 13 chrX 14266089 14266407 -152383889 - Lx7 LINE L1 -571 7125 6802 3 693 210 93 74 0 chrX 14267708 14267762 -152382534 + A-rich Low_complexity Low_complexity 2 59 0 3 693 1921 231 8 13 chrX 14267883 14268269 -152382027 + MTD LTR MaLR 2 385 -34 3 693 188 100 25 0 chrX 14268273 14268313 -152381983 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 3 693 216 0 0 0 chrX 14268410 14268434 -152381862 + (T)n Simple_repeat Simple_repeat 1 24 0 3 693 952 289 35 32 chrX 14268751 14269033 -152381263 + B4A SINE B4 3 285 -7 3 693 405 0 0 0 chrX 14269095 14269140 -152381156 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 693 481 224 347 0 chrX 14269239 14269386 -152380910 + B3 SINE B2 4 201 -15 3 693 243 0 0 0 chrX 14269511 14269538 -152380758 + (T)n Simple_repeat Simple_repeat 1 27 0 3 693 1126 338 40 70 chrX 14269580 14270233 -152380063 - Lx7 LINE L1 -478 7218 6586 3 693 271 213 35 0 chrX 14270319 14270407 -152379889 + L1M5 LINE L1 5700 5795 -447 3 693 244 333 56 0 chrX 14271421 14271493 -152378803 + MER5A DNA MER1_type 4 79 -110 3 693 267 143 0 0 chrX 14271509 14271551 -152378745 + B2_Mm2 SINE B2 84 125 -70 3 693 254 29 0 28 chrX 14271580 14271616 -152378680 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 3 693 8403 97 25 0 chrX 14271678 14272941 -152377355 - MusHAL1 LINE L1 -281 2431 1137 3 693 242 241 82 24 chrX 14273947 14273960 -152376336 + MTD LTR MaLR 1 13 -408 3 693 279 0 0 0 chrX 14273960 14273991 -152376305 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 693 242 241 82 24 chrX 14273991 14274062 -152376234 + MTD LTR MaLR 14 90 -331 3 693 450 226 17 7 chrX 14274076 14274179 -152376117 + B1_Mur1 SINE Alu 41 149 -1 3 693 1310 245 84 3 chrX 14274178 14274489 -152375807 + MTD LTR MaLR 84 419 0 3 693 405 0 0 0 chrX 14274500 14274545 -152375751 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 693 387 0 0 0 chrX 14275051 14275094 -152375202 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 693 21 0 0 0 chrX 14275268 14275289 -152375007 + AT_rich Low_complexity Low_complexity 1 21 0 3 693 22 0 0 0 chrX 14275296 14275318 -152374978 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 409 282 25 113 chrX 14275814 14276018 -152374278 - MTEa LTR MaLR -3 376 191 3 693 443 202 11 53 chrX 14276202 14276296 -152374000 - MTEa LTR MaLR -289 90 1 3 693 540 0 0 0 chrX 14276447 14276507 -152373789 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 693 394 133 56 0 chrX 14276522 14276612 -152373684 - Lx4A LINE L1 0 7058 6964 3 693 2021 329 28 12 chrX 14277145 14277866 -152372430 + Lx8 LINE L1 6436 7167 -306 3 693 297 51 0 0 chrX 14278104 14278143 -152372153 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 693 4229 52 2 13 chrX 14278742 14278869 -152371427 - L1Md_F2 LINE L1 0 6582 6461 3 693 2308 146 81 26 chrX 14278869 14279326 -152370970 + RLTR45 LTR ERVK 1 482 0 3 693 4229 52 2 13 chrX 14279326 14279730 -152370566 - L1Md_F2 LINE L1 -122 6460 6057 3 693 550 83 0 0 chrX 14279741 14279813 -152370483 - tRNA-Pro-CCA tRNA tRNA -3 72 1 3 693 7432 65 7 8 chrX 14280340 14281576 -152368720 - L1_Mus2 LINE L1 -2 6564 5332 3 693 8539 110 8 2 chrX 14281576 14282850 -152367446 + L1_Mus2 LINE L1 4025 5305 -578 3 693 642 295 24 40 chrX 14283125 14283376 -152366920 - Kanga1a DNA Tc2 -73 681 435 3 693 1279 108 193 0 chrX 14283494 14283743 -152366553 + RLTR31A_Mm LTR ERVK 1 297 -287 3 693 212 0 0 35 chrX 14283749 14283778 -152366518 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 3 693 435 269 121 54 chrX 14283781 14283847 -152366449 + RMER3D-int LTR ERVK 1 60 -2782 3 693 182 37 0 36 chrX 14283847 14283875 -152366421 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 3 693 435 269 121 54 chrX 14283875 14284032 -152366264 + RMER3D-int LTR ERVK 61 239 -2603 3 693 488 203 17 53 chrX 14284020 14284223 -152366073 + RMER3D-int LTR ERVK 1014 1150 -1692 3 693 1159 176 62 39 chrX 14284232 14284692 -152365604 + RMER3D-int LTR ERVK 387 1293 -1549 3 693 4559 204 58 40 chrX 14284769 14286012 -152364284 + RMER3D-int LTR ERVK 1400 2664 -178 3 86 28912 72 14 5 chrX 14286034 14290229 -152360067 - L1Md_F2 LINE L1 0 6585 2362 3 694 201 39 0 0 chrX 14290229 14290255 -152360041 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 694 28912 75 13 6 chrX 14290255 14290726 -152359570 - L1Md_F2 LINE L1 -3525 2361 1877 3 694 3500 143 7 11 chrX 14290726 14291672 -152358624 - L1Md_F2 LINE L1 -4506 1380 484 3 694 258 282 93 60 chrX 14291680 14291831 -152358465 + RLTR31A_Mm LTR ERVK 413 568 -16 3 694 198 0 0 0 chrX 14291831 14291853 -152358443 + (T)n Simple_repeat Simple_repeat 1 22 0 3 694 556 350 38 0 chrX 14291875 14292061 -152358235 - Kanga1a DNA Tc2 -455 299 107 3 694 3327 105 50 2 chrX 14292063 14292567 -152357729 - Lx2 LINE L1 -837 6160 5633 3 694 3635 47 0 0 chrX 14292934 14293377 -152356919 - L1Md_A LINE L1 0 6582 6140 3 694 293 198 11 0 chrX 14293404 14293495 -152356801 + CT-rich Low_complexity Low_complexity 2 93 0 3 694 375 333 105 6 chrX 14293814 14293986 -152356310 + L2 LINE L2 2281 2469 -950 3 694 1450 53 32 0 chrX 14295546 14295733 -152354563 + L1_Mus1 LINE L1 6375 6567 0 3 694 216 97 0 0 chrX 14295929 14295960 -152354336 + (T)n Simple_repeat Simple_repeat 1 31 0 3 694 290 356 43 36 chrX 14296373 14296513 -152353783 - L2b LINE L2 -20 3355 3215 3 694 1953 218 91 25 chrX 14296787 14297262 -152353034 + RMER1B Other Other 558 1063 -3 3 694 180 0 0 0 chrX 14297917 14297937 -152352359 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 694 423 0 0 0 chrX 14298262 14298309 -152351987 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 694 198 0 0 0 chrX 14298309 14298330 -152351966 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 694 321 26 0 0 chrX 14298330 14298367 -152351929 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 694 704 52 21 0 chrX 14298707 14298803 -152351493 + (GAAA)n Simple_repeat Simple_repeat 1 98 0 3 694 642 298 25 6 chrX 14299168 14299330 -152350966 - MTEb LTR MaLR -14 365 201 3 694 301 216 7 7 chrX 14299330 14299470 -152350826 + GA-rich Low_complexity Low_complexity 1 140 0 3 694 494 253 269 6 chrX 14299470 14299645 -152350651 - MTEb LTR MaLR -158 221 1 3 694 676 352 21 25 chrX 14300136 14300375 -152349921 - B4A SINE B4 -14 278 41 3 694 27456 70 2 0 chrX 14300680 14305075 -152345221 - L1Md_F2 LINE L1 -1 6581 2177 3 694 1475 225 37 6 chrX 14305081 14305407 -152344889 - ORR1D-int LTR MaLR -56 1314 979 3 694 189 0 0 0 chrX 14305728 14305749 -152344547 + (T)n Simple_repeat Simple_repeat 1 21 0 3 694 223 326 54 34 chrX 14305880 14306029 -152344267 - L2 LINE L2 -938 2481 2330 3 694 21 36 0 0 chrX 14306231 14306259 -152344037 + AT_rich Low_complexity Low_complexity 1 28 0 3 694 1268 105 0 20 chrX 14306259 14306454 -152343842 - B2_Mm2 SINE B2 -3 192 2 3 694 681 362 80 46 chrX 14306607 14307040 -152343256 - L2 LINE L2 -1562 1857 1431 3 694 2929 79 9 19 chrX 14307040 14307464 -152342832 - BGLII LTR ERVK 0 421 2 3 694 681 362 80 46 chrX 14307464 14307594 -152342702 - L2 LINE L2 -1989 1430 1275 3 694 337 392 18 31 chrX 14307610 14307834 -152342462 - L2 LINE L2 -2282 1137 917 3 694 517 199 8 8 chrX 14308769 14308896 -152341400 + (TA)n Simple_repeat Simple_repeat 1 127 0 3 694 369 167 26 44 chrX 14308897 14309010 -152341286 - Lx9 LINE L1 -1 7643 7533 3 694 373 303 66 36 chrX 14309015 14309152 -152341144 - B1F SINE Alu -2 147 7 3 694 5249 71 0 6 chrX 14310110 14310802 -152339494 - L1Md_F2 LINE L1 -19 6563 5876 3 694 23 0 0 0 chrX 14312285 14312308 -152337988 + AT_rich Low_complexity Low_complexity 1 23 0 3 694 594 0 0 0 chrX 14312938 14313004 -152337292 + (CAAAA)n Simple_repeat Simple_repeat 2 67 0 3 694 23 33 0 0 chrX 14313154 14313184 -152337112 + AT_rich Low_complexity Low_complexity 1 30 0 3 694 2178 195 79 83 chrX 14313772 14314118 -152336178 + RLTR11A LTR ERVK 1 348 -180 4 694 6910 113 11 35 chrX 14314118 14315250 -152335046 - Lx3A LINE L1 -7 6974 5870 4 694 2178 195 79 83 chrX 14315250 14315433 -152334863 + RLTR11A LTR ERVK 349 528 0 4 694 22 0 0 0 chrX 14315464 14315486 -152334810 + AT_rich Low_complexity Low_complexity 1 22 0 4 694 516 288 34 18 chrX 14315603 14315960 -152334336 - L1M5 LINE L1 -2198 5684 5317 4 694 249 108 0 0 chrX 14316736 14316773 -152333523 + (T)n Simple_repeat Simple_repeat 1 37 0 4 694 980 88 73 0 chrX 14316775 14316911 -152333385 - B1_Mus1 SINE Alu 0 148 3 4 694 311 328 80 28 chrX 14316971 14317102 -152333194 - ORR1E LTR MaLR -169 190 57 4 694 724 63 18 0 chrX 14317102 14317213 -152333083 + (TTAGGG)n Simple_repeat Simple_repeat 3 115 0 4 694 311 328 80 28 chrX 14317213 14317257 -152333039 - ORR1E LTR MaLR -303 56 7 4 694 1686 235 40 21 chrX 14317555 14317668 -152332628 - Lx6 LINE L1 -20 7440 7325 4 694 531 0 0 0 chrX 14317668 14317727 -152332569 + (TAAAA)n Simple_repeat Simple_repeat 2 60 0 4 694 1686 235 40 21 chrX 14317727 14318035 -152332261 - Lx6 LINE L1 -136 7324 7012 4 694 1325 263 127 28 chrX 14318494 14319540 -152330756 - L1MB7 LINE L1 -15 6667 5518 4 694 305 301 11 51 chrX 14319562 14319737 -152330559 - L1MB7 LINE L1 -5477 1065 898 4 694 243 0 0 0 chrX 14319783 14319810 -152330486 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 694 360 0 0 0 chrX 14319810 14319850 -152330446 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 694 378 0 0 0 chrX 14319955 14319997 -152330299 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 694 364 294 10 0 chrX 14320004 14320106 -152330190 - L1MB7 LINE L1 -5779 763 661 4 694 213 39 0 0 chrX 14320133 14320159 -152330137 + (A)n Simple_repeat Simple_repeat 1 26 0 4 694 943 84 19 25 chrX 14320366 14320524 -152329772 + L1_Mus3 LINE L1 6476 6632 -6 4 694 452 319 9 47 chrX 14320539 14320753 -152329543 - L1MB7 LINE L1 -6336 206 1 4 694 280 329 0 0 chrX 14321877 14321959 -152328337 + CT-rich Low_complexity Low_complexity 5 86 0 4 694 229 299 43 106 chrX 14322577 14322738 -152327558 + L1MDb LINE L1 1 151 -6482 4 694 258 229 39 10 chrX 14323161 14323250 -152327046 + L1MDb LINE L1 978 1076 -5464 4 694 327 229 93 73 chrX 14323332 14323483 -152326813 + L1MD2 LINE L1 6191 6344 -15 4 694 234 246 0 0 chrX 14323746 14323803 -152326493 + A-rich Low_complexity Low_complexity 3 59 0 4 694 435 38 0 0 chrX 14323970 14324023 -152326273 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 694 1838 0 0 0 chrX 14324979 14325187 -152325109 - L1Md_T LINE L1 -12 6570 6363 4 694 722 214 37 37 chrX 14325211 14325400 -152324896 + Lx4B LINE L1 6870 7058 0 4 694 1202 122 6 11 chrX 14325398 14325581 -152324715 + L1_Mur2 LINE L1 5441 5622 -255 4 694 3382 178 48 10 chrX 14325584 14326275 -152324021 - L1_Mur1 LINE L1 -306 5580 4864 4 694 18801 133 121 32 chrX 14326276 14327858 -152322438 + L1_Mur1 LINE L1 63 2016 -3870 4 694 3291 38 2 2 chrX 14327858 14328254 -152322042 + MTA_Mm LTR MaLR 1 396 0 4 694 18801 98 56 10 chrX 14328254 14330440 -152319856 + L1_Mur1 LINE L1 2017 4328 -1558 4 694 6296 65 0 2 chrX 14330730 14331539 -152318757 + L1Md_T LINE L1 5776 6582 0 4 694 316 388 23 41 chrX 14331889 14332061 -152318235 - LTR33 LTR ERVL -102 413 245 4 694 1157 69 7 0 chrX 14332291 14332436 -152317860 + B1_Mus1 SINE Alu 3 148 0 4 694 438 94 0 0 chrX 14332439 14332503 -152317793 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 4 694 972 144 0 7 chrX 14332546 14332693 -152317603 + B1_Mus1 SINE Alu 2 147 -1 4 694 286 354 112 12 chrX 14332712 14332872 -152317424 + LTR86A2 LTR ERVL 130 305 -203 4 694 477 252 98 27 chrX 14333425 14333649 -152316647 - L1_Mur3 LINE L1 -2802 3078 2839 4 694 274 308 57 50 chrX 14334318 14334458 -152315838 + MIRb SINE MIR 64 204 -58 4 694 620 105 0 9 chrX 14335528 14335643 -152314653 - L1_Mus4 LINE L1 -2 6634 6521 4 694 2925 173 112 26 chrX 14335643 14336551 -152313745 - RLTR13D1 LTR ERVK 0 1023 10 4 694 19106 117 147 45 chrX 14336577 14338035 -152312261 - L1_Mus3 LINE L1 -112 6526 4827 4 694 592 276 44 31 chrX 14338035 14338263 -152312033 - RLTR10D LTR ERVK -128 231 1 4 694 19106 117 147 45 chrX 14338263 14341475 -152308821 - L1_Mus3 LINE L1 -112 4826 1077 4 694 301 348 16 57 chrX 14341950 14342072 -152308224 + MER45B DNA Tip100 1 117 -923 4 694 390 349 33 13 chrX 14342327 14342477 -152307819 + MER45B DNA Tip100 311 463 -577 4 694 2578 218 19 112 chrX 14342477 14343211 -152307085 + RMER12B LTR ERVK 1 692 -712 4 694 5075 98 101 3 chrX 14343219 14343985 -152306311 - L1_Mus3 LINE L1 -7 6631 5791 4 694 273 270 77 22 chrX 14344769 14344860 -152305436 - Tigger5 DNA MER2_type 0 2406 2311 4 694 404 335 19 26 chrX 14344921 14345077 -152305219 - Tigger5 DNA MER2_type -2243 163 9 4 694 546 364 12 0 chrX 14345092 14345257 -152305039 - ID_B1 SINE B4 -3 221 55 4 694 227 299 89 44 chrX 14345644 14345847 -152304449 - L1MD2 LINE L1 -33 6326 6115 4 694 6673 123 30 16 chrX 14346662 14348360 -152301936 + L1VL4 LINE L1 191 1911 -1648 4 694 35282 75 7 11 chrX 14348368 14354561 -152295735 - L1Md_F3 LINE L1 -1 6583 422 4 694 9148 154 301 96 chrX 14354553 14355369 -152294927 + L1Md_F2 LINE L1 2247 3067 -2816 4 694 1010 82 30 0 chrX 14355369 14355504 -152294792 + B1_Mus1 SINE Alu 1 139 -9 4 694 207 0 0 0 chrX 14355504 14355527 -152294769 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 694 9148 130 225 71 chrX 14355527 14358075 -152292221 + L1Md_F2 LINE L1 3068 6233 -349 4 694 993 78 104 196 chrX 14358070 14358209 -152292087 + L1Md_F2 LINE L1 6338 6491 -91 4 694 1611 179 3 78 chrX 14358209 14358542 -152291754 - RLTR10E LTR ERVK -3 308 1 4 694 993 78 104 196 chrX 14358542 14358672 -152291624 + L1Md_F2 LINE L1 6492 6582 0 4 694 5196 149 32 5 chrX 14358685 14359671 -152290625 + Lx LINE L1 5564 6646 -8 4 694 360 265 172 26 chrX 14359695 14359962 -152290334 - Lx9 LINE L1 -1670 5974 5669 4 694 21 36 0 0 chrX 14360050 14360078 -152290218 + AT_rich Low_complexity Low_complexity 1 28 0 4 694 258 300 21 62 chrX 14360526 14360622 -152289674 - MTEa LTR MaLR -270 109 18 4 694 230 211 0 0 chrX 14360645 14360697 -152289599 - L1MEf LINE L1 -4699 1701 1650 4 694 319 367 98 36 chrX 14360709 14361045 -152289251 - L1MEf LINE L1 -5803 612 256 4 694 655 249 94 36 chrX 14361418 14361747 -152288549 - L1MD LINE L1 -1498 4648 4301 4 694 3490 53 2 0 chrX 14361879 14362315 -152287981 - L1Md_F2 LINE L1 -14 6568 6132 4 694 3265 5 0 0 chrX 14362369 14362737 -152287559 + L1Md_A LINE L1 6215 6582 0 4 694 535 304 115 18 chrX 14362770 14363108 -152287188 - L1MD LINE L1 -1883 4263 3893 4 694 26156 134 21 100 chrX 14363127 14366380 -152283916 - L1_Mus1 LINE L1 -1 6566 3395 4 694 2022 117 259 27 chrX 14366380 14366828 -152283468 - RLTR6_Mm LTR ERV1 -66 588 37 4 694 26156 134 21 100 chrX 14366828 14366868 -152283428 - L1_Mus1 LINE L1 -3173 3394 3356 4 694 279 209 209 0 chrX 14366868 14366935 -152283361 - RLTR6_Mm LTR ERV1 -573 81 1 4 694 26156 134 21 100 chrX 14366935 14370050 -152280246 - L1_Mus1 LINE L1 -1 3355 316 4 694 21 36 0 0 chrX 14370073 14370101 -152280195 + AT_rich Low_complexity Low_complexity 1 28 0 4 694 390 288 39 31 chrX 14370171 14370300 -152279996 - MER5A DNA MER1_type -58 131 2 4 694 432 0 0 0 chrX 14371350 14371398 -152278898 + (TCC)n Simple_repeat Simple_repeat 1 48 0 4 694 1908 130 76 3 chrX 14371795 14372112 -152278184 + Lx LINE L1 6307 6646 -8 4 694 219 286 0 0 chrX 14372174 14372234 -152278062 - L2a LINE L2 0 3426 3328 4 694 183 220 0 0 chrX 14372290 14372340 -152277956 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 694 531 316 50 10 chrX 14372386 14372584 -152277712 - B3 SINE B2 -7 209 4 4 694 402 345 67 12 chrX 14372602 14372857 -152277439 - L2a LINE L2 -527 2892 2624 4 694 257 294 21 14 chrX 14373478 14373519 -152276777 + ORR1D2-int LTR MaLR 609 650 -859 4 694 1026 84 21 0 chrX 14373519 14373661 -152276635 + B1_Mus1 SINE Alu 2 146 -2 4 694 1010 145 48 16 chrX 14373732 14373921 -152276375 + RMER16 LTR ERVK 339 533 0 4 694 8671 108 18 6 chrX 14373921 14375194 -152275102 + RMER16-int LTR ERVK 1 1288 -4118 4 694 7149 97 2 18 chrX 14375194 14376210 -152274086 + L1_Mus4 LINE L1 5637 6636 0 4 694 2047 198 43 5 chrX 14376324 14376741 -152273555 + Lx5 LINE L1 6014 6446 -604 4 694 654 212 8 8 chrX 14376815 14376948 -152273348 + Lx5 LINE L1 6703 6835 -215 4 694 616 194 8 0 chrX 14376955 14377079 -152273217 + Lx5 LINE L1 6926 7050 0 4 694 751 309 24 8 chrX 14377235 14377483 -152272813 + Lx6 LINE L1 7193 7444 -16 4 694 773 273 69 83 chrX 14377618 14377993 -152272303 + ORR1D2 LTR MaLR 1 370 0 4 694 1950 179 18 18 chrX 14378401 14378793 -152271503 - ORR1B1 LTR MaLR 0 394 3 4 694 226 314 64 64 chrX 14379057 14379166 -152271130 + ORR1E LTR MaLR 246 354 -5 4 694 312 237 52 13 chrX 14379277 14379354 -152270942 + MLT1F1 LTR MaLR 3 82 -487 4 694 300 27 0 0 chrX 14379359 14379396 -152270900 + (CAA)n Simple_repeat Simple_repeat 2 38 0 4 694 1109 58 14 0 chrX 14379650 14379789 -152270507 - B1_Mur4 SINE Alu -9 141 1 4 694 474 349 22 34 chrX 14379790 14379968 -152270328 + MLT1G3 LTR MaLR 384 559 -36 4 694 1959 219 56 17 chrX 14380933 14381390 -152268906 - Lx2B LINE L1 -128 6872 6100 4 694 356 199 68 81 chrX 14381744 14381892 -152268404 - L1ME4a LINE L1 -2 6122 5977 4 694 7487 135 65 2 chrX 14382022 14383257 -152267039 - Lx2 LINE L1 -2 6995 5683 4 694 18740 120 44 7 chrX 14383250 14383726 -152266570 - Lx3_Mus LINE L1 -1064 5945 5340 4 694 4329 86 40 9 chrX 14383726 14384358 -152265938 - L1_Mus4 LINE L1 -2 6634 5984 4 694 18740 174 89 11 chrX 14384358 14387972 -152262324 - Lx3_Mus LINE L1 -547 5339 1536 4 694 463 294 151 21 chrX 14387989 14388274 -152262022 - L2 LINE L2 -779 2640 2319 4 694 37229 35 0 0 chrX 14388511 14393924 -152256372 - L1Md_T LINE L1 0 6582 1170 4 694 5209 175 20 26 chrX 14393930 14395408 -152254888 - L1Md_T LINE L1 -5411 1205 99 4 694 2679 123 21 28 chrX 14395408 14396207 -152254089 - MusHAL1 LINE L1 -2365 988 197 4 694 7505 50 2 1 chrX 14396708 14397686 -152252610 - L1Md_F2 LINE L1 -2 6580 5602 4 694 1554 109 22 0 chrX 14397693 14397922 -152252374 - IAPLTR2_Mm LTR ERVK -241 234 1 4 694 6584 36 4 11 chrX 14397922 14398757 -152251539 - IAPEz-int LTR ERVK 0 6481 5653 4 694 2510 70 0 6 chrX 14398752 14399096 -152251200 - IAPEz-int LTR ERVK -4781 1700 1359 4 694 3122 69 22 16 chrX 14399096 14399662 -152250634 - IAPEz-int LTR ERVK -5819 662 168 4 694 262 291 0 0 chrX 14399662 14399717 -152250579 - RLTR27 LTR ERVK -34 275 221 4 694 776 121 33 98 chrX 14399717 14399901 -152250395 - IAPEz-int LTR ERVK -6288 193 22 4 694 332 93 0 0 chrX 14399904 14399958 -152250338 - IAPEz-int LTR ERVK -1931 56 3 4 694 1588 96 22 0 chrX 14399967 14400196 -152250100 - IAPLTR2_Mm LTR ERVK -241 234 1 4 694 11597 74 1 0 chrX 14400196 14401801 -152248495 - L1_Mm LINE L1 -277 5606 4001 4 694 779 345 35 16 chrX 14402161 14402612 -152247684 - Lx8 LINE L1 -186 7287 6828 4 694 24 0 0 0 chrX 14402618 14402642 -152247654 + AT_rich Low_complexity Low_complexity 1 24 0 4 694 383 304 11 0 chrX 14403242 14403334 -152246962 + MTE2b LTR MaLR 3 95 -284 4 694 19306 171 17 89 chrX 14403348 14408019 -152242277 + L1_Mus4 LINE L1 405 5106 -777 4 694 1627 219 42 83 chrX 14408019 14408506 -152241790 - RLTR1B LTR ERV1 0 512 1 4 694 19306 171 17 89 chrX 14408506 14409006 -152241290 + L1_Mus4 LINE L1 5107 5611 -272 4 694 279 0 0 0 chrX 14409006 14409037 -152241259 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 4 694 19306 115 25 22 chrX 14409037 14410052 -152240244 + L1_Mus4 LINE L1 5612 6629 -7 4 694 1153 287 54 0 chrX 14410067 14410363 -152239933 + MTE2b LTR MaLR 68 379 0 4 694 3891 79 0 0 chrX 14410413 14410944 -152239352 + L1Md_F2 LINE L1 5055 5585 -298 4 694 7364 79 4 6 chrX 14410945 14411942 -152238354 + L1Md_F2 LINE L1 5587 6581 -1 4 694 29 60 0 0 chrX 14412129 14412179 -152238117 + AT_rich Low_complexity Low_complexity 1 50 0 5 694 21 0 0 0 chrX 14413793 14413814 -152236482 + AT_rich Low_complexity Low_complexity 1 21 0 5 694 228 67 0 0 chrX 14414024 14414054 -152236242 + (A)n Simple_repeat Simple_repeat 1 30 0 5 694 244 86 0 79 chrX 14414473 14414536 -152235760 + T-rich Low_complexity Low_complexity 2 59 0 5 694 261 119 0 0 chrX 14414984 14415026 -152235270 + (TTG)n Simple_repeat Simple_repeat 3 44 0 5 694 243 0 0 0 chrX 14415581 14415608 -152234688 + (TC)n Simple_repeat Simple_repeat 2 28 0 5 694 478 0 32 0 chrX 14415608 14415669 -152234627 + (TA)n Simple_repeat Simple_repeat 1 64 0 5 694 434 281 87 9 chrX 14415696 14415811 -152234485 - MER58A DNA MER1_type -90 134 11 5 694 451 360 82 51 chrX 14416139 14416415 -152233881 + MLT1H1 LTR MaLR 1 287 -304 5 694 204 280 341 0 chrX 14416647 14416779 -152233517 + MER5A DNA MER1_type 13 189 0 5 694 1833 240 167 92 chrX 14416891 14417825 -152232471 + RMER17B LTR ERVK 1 898 -10 5 695 4868 127 22 13 chrX 14418078 14418843 -152231453 - Lx3C LINE L1 -5 6971 6200 5 695 671 311 105 3 chrX 14418970 14419283 -152231013 - MER2 DNA MER2_type 0 345 1 5 695 470 309 62 29 chrX 14419329 14419539 -152230757 + MIR SINE MIR 33 249 -13 5 695 210 280 0 0 chrX 14419547 14419597 -152230699 - MIRb SINE MIR -64 204 155 5 695 681 184 34 7 chrX 14419981 14420129 -152230167 + Lx6 LINE L1 6302 6453 -1007 5 695 332 280 0 0 chrX 14420132 14420232 -152230064 - Lx9 LINE L1 -349 7295 7196 5 695 25 51 0 0 chrX 14420887 14420926 -152229370 + AT_rich Low_complexity Low_complexity 1 39 0 5 695 3994 60 0 36 chrX 14420982 14421544 -152228752 + L1Md_F2 LINE L1 6053 6582 0 5 695 684 283 161 8 chrX 14421569 14421885 -152228411 + MLT1A0 LTR MaLR 1 408 0 5 695 461 272 22 7 chrX 14422353 14422490 -152227806 - MIR SINE MIR -26 236 98 5 695 219 314 0 0 chrX 14422887 14422938 -152227358 + ID4_ SINE ID 1 51 -32 5 695 408 20 0 0 chrX 14422957 14423006 -152227290 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 695 393 22 0 0 chrX 14424439 14424485 -152225811 + (TGG)n Simple_repeat Simple_repeat 1 46 0 5 695 2296 172 47 2 chrX 14424608 14425052 -152225244 + RMER4A LTR ERVK 3 466 0 5 695 3069 38 0 0 chrX 14425637 14426003 -152224293 - L1Md_T LINE L1 -3 6579 6214 5 695 289 308 38 9 chrX 14426514 14426619 -152223677 + PB1D10 SINE Alu 1 108 -9 5 695 231 175 0 0 chrX 14426697 14426754 -152223542 + GA-rich Low_complexity Low_complexity 1 57 0 5 695 189 0 0 0 chrX 14426837 14426858 -152223438 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 5 695 4373 144 41 6 chrX 14427432 14428144 -152222152 - RMER19A LTR ERVK 0 737 1 5 695 342 230 27 0 chrX 14428372 14428446 -152221850 - ID_B1 SINE B4 -48 176 101 5 695 273 245 0 0 chrX 14428404 14428453 -152221843 - B1F2 SINE Alu -88 61 13 5 695 393 325 117 18 chrX 14428731 14428894 -152221402 + MER2 DNA MER2_type 1 179 -166 5 695 329 0 24 0 chrX 14429037 14429078 -152221218 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 695 482 360 50 96 chrX 14429090 14429370 -152220926 - B4A SINE B4 0 292 26 5 695 3410 84 2 0 chrX 14429625 14430077 -152220219 - L1_Mus1 LINE L1 -1 6566 6114 5 695 9497 91 0 17 chrX 14430077 14431525 -152218771 - L1_Mm LINE L1 -1527 4356 2933 5 695 2550 79 25 3 chrX 14431507 14431875 -152218421 - L1_Mus1 LINE L1 -318 6249 5874 5 695 1201 276 36 54 chrX 14432310 14432643 -152217653 + MTE2b LTR MaLR 3 329 -50 5 695 237 308 38 25 chrX 14433169 14433249 -152217047 - ORR1E LTR MaLR -219 140 60 5 695 653 306 40 6 chrX 14433433 14433607 -152216689 + B3A SINE B2 15 194 -4 5 695 1103 91 0 0 chrX 14433676 14433819 -152216477 + B1_Mus1 SINE Alu 1 143 -5 5 695 477 330 43 36 chrX 14433866 14434143 -152216153 + L1M4 LINE L1 496 774 -5768 5 695 353 287 16 77 chrX 14434209 14434519 -152215777 + L1M4 LINE L1 820 1110 -5432 5 695 315 200 0 16 chrX 14434721 14434782 -152215514 + B4 SINE B4 25 84 -208 5 695 11038 131 27 3 chrX 14434790 14437649 -152212647 - L1_Mus2 LINE L1 0 6566 3479 5 695 420 37 0 0 chrX 14437649 14437703 -152212593 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 695 10688 188 96 4 chrX 14437703 14437991 -152212305 - L1_Mus2 LINE L1 -2408 3478 3191 5 695 7710 67 1 2 chrX 14438019 14439099 -152211197 + L1_Mm LINE L1 2299 3377 -2506 5 695 2597 189 52 3 chrX 14439095 14439673 -152210623 - L1Md_F LINE L1 -5427 1092 487 5 695 251 369 0 0 chrX 14439821 14439886 -152210410 + RSINE1 SINE B4 87 151 -14 5 695 535 255 72 26 chrX 14440038 14440191 -152210105 + MLT1D LTR MaLR 346 505 0 5 695 726 355 52 63 chrX 14440417 14440784 -152209512 - LTR16C LTR ERVL -108 381 19 5 695 458 313 120 51 chrX 14441249 14441638 -152208658 - L1MC4a LINE L1 -136 5988 5574 5 695 1057 211 0 20 chrX 14442567 14442770 -152207526 - ORR1B1 LTR MaLR 0 394 196 5 695 25069 142 24 17 chrX 14442770 14447679 -152202617 - L1_Mus1 LINE L1 -157 6410 1460 5 695 7727 151 16 8 chrX 14447676 14448257 -152202039 - L1_Mm LINE L1 -52 5831 5250 5 695 496 0 0 30 chrX 14448257 14448323 -152201973 + (TA)n Simple_repeat Simple_repeat 2 65 0 5 695 7727 151 16 8 chrX 14448323 14449062 -152201234 - L1_Mm LINE L1 -634 5249 4502 5 695 23 86 0 0 chrX 14449074 14449132 -152201164 + AT_rich Low_complexity Low_complexity 1 58 0 5 695 468 62 0 0 chrX 14449937 14450001 -152200295 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 695 256 357 21 7 chrX 14451207 14451348 -152198948 + B1F1 SINE Alu 5 147 -2 5 695 23 0 0 0 chrX 14451431 14451454 -152198842 + AT_rich Low_complexity Low_complexity 1 23 0 5 695 1551 310 65 56 chrX 14451496 14451751 -152198545 + Lx8 LINE L1 6680 6921 -552 5 695 1089 163 5 5 chrX 14451751 14451942 -152198354 - Lx LINE L1 -7 6647 6457 5 695 1551 310 65 56 chrX 14451942 14452420 -152197876 + Lx8 LINE L1 6922 7420 -53 5 695 342 0 0 0 chrX 14452444 14452482 -152197814 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 695 393 22 0 0 chrX 14453206 14453252 -152197044 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 695 372 43 0 0 chrX 14453252 14453297 -152196999 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 695 33336 73 1 16 chrX 14453746 14458945 -152191351 + L1Md_F2 LINE L1 468 5586 -297 5 695 7924 49 7 0 chrX 14458946 14459922 -152190374 + L1Md_F2 LINE L1 5588 6570 -12 5 695 466 218 19 38 chrX 14459943 14460048 -152190248 + B1_Mur2 SINE Alu 46 148 -1 5 695 441 0 0 0 chrX 14460526 14460575 -152189721 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 695 657 282 26 42 chrX 14460579 14460768 -152189528 - B3 SINE B2 -29 187 2 5 695 24 0 0 0 chrX 14460998 14461022 -152189274 + AT_rich Low_complexity Low_complexity 1 24 0 5 695 220 375 0 0 chrX 14461054 14461126 -152189170 + MIRc SINE MIR 46 117 -151 5 695 978 242 14 5 chrX 14461216 14461428 -152188868 - B3 SINE B2 0 216 3 5 695 200 268 0 0 chrX 14461626 14461667 -152188629 + G-rich Low_complexity Low_complexity 1 41 0 5 695 245 311 31 62 chrX 14462161 14462242 -152188054 + B1F SINE Alu 51 130 -19 5 695 585 129 0 0 chrX 14462242 14462335 -152187961 + (TA)n Simple_repeat Simple_repeat 2 94 0 5 695 245 311 31 62 chrX 14462335 14462349 -152187947 + B1F SINE Alu 131 143 -6 5 695 22 35 0 0 chrX 14462349 14462378 -152187918 + AT_rich Low_complexity Low_complexity 1 29 0 5 695 255 349 71 13 chrX 14462812 14462966 -152187330 - MIRc SINE MIR -6 262 100 5 695 1107 95 0 0 chrX 14463016 14463174 -152187122 + (TTCCC)n Simple_repeat Simple_repeat 4 161 0 5 695 393 22 0 0 chrX 14463240 14463286 -152187010 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 695 359 360 84 52 chrX 14463453 14463873 -152186423 + MLT1H2 LTR MaLR 129 543 -6 5 695 294 352 19 28 chrX 14464666 14464774 -152185522 - RMER10B LTR ERVL 0 398 292 5 695 180 77 0 0 chrX 14465191 14465217 -152185079 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 5 695 216 297 143 0 chrX 14465276 14465367 -152184929 - MIRm SINE MIR -16 260 157 5 695 253 220 0 0 chrX 14465331 14465381 -152184915 - L2c LINE L2 -69 3318 3269 5 695 1373 229 86 50 chrX 14465456 14465875 -152184421 - RMER10A LTR ERVL -6 436 3 5 695 334 266 332 37 chrX 14466191 14466344 -152183952 + B3A SINE B2 1 198 0 5 695 448 144 18 46 chrX 14466476 14466585 -152183711 + Lx9 LINE L1 7539 7644 0 5 695 750 75 0 0 chrX 14466818 14466924 -152183372 + (GGAA)n Simple_repeat Simple_repeat 3 108 0 5 695 310 315 55 18 chrX 14466997 14467107 -152183189 + RSINE1 SINE B4 38 151 -14 5 695 212 86 0 28 chrX 14467108 14467144 -152183152 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 695 5118 104 1 3 chrX 14467190 14467921 -152182375 + L1_Mm LINE L1 5076 5805 -78 5 695 2705 145 75 0 chrX 14467921 14468412 -152181884 + L1Md_F3 LINE L1 6056 6583 -1 5 695 368 272 48 0 chrX 14468478 14468581 -152181715 + PB1D10 SINE Alu 10 117 0 5 695 558 0 0 0 chrX 14468592 14468654 -152181642 + (TC)n Simple_repeat Simple_repeat 1 62 0 5 695 21 0 0 0 chrX 14470130 14470151 -152180145 + AT_rich Low_complexity Low_complexity 1 21 0 5 695 312 27 0 0 chrX 14470863 14470900 -152179396 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 695 325 263 56 107 chrX 14471006 14471202 -152179094 + B2_Mm2 SINE B2 1 186 -9 5 695 316 356 99 41 chrX 14471345 14471688 -152178608 - L2a LINE L2 -117 3309 2947 5 695 398 393 28 0 chrX 14471760 14471905 -152178391 + LTR16A LTR ERVL 119 267 -184 5 695 221 333 12 25 chrX 14472111 14472191 -152178105 - L2a LINE L2 -574 2845 2767 5 695 1094 170 0 0 chrX 14472207 14472378 -152177918 - Lx9 LINE L1 -755 6889 6719 5 695 2753 209 100 14 chrX 14472376 14473064 -152177232 + Lx9 LINE L1 6895 7641 -3 5 695 192 408 8 8 chrX 14473083 14473204 -152177092 - L2a LINE L2 -681 2738 2618 5 695 633 348 30 4 chrX 14473736 14474004 -152176292 - B4A SINE B4 -14 278 4 6 695 546 298 76 16 chrX 14474008 14474257 -152176039 + MER58B DNA MER1_type 77 340 -1 6 695 23 0 0 0 chrX 14474482 14474505 -152175791 + AT_rich Low_complexity Low_complexity 1 23 0 6 695 544 298 81 50 chrX 14474890 14475247 -152175049 - L1MD2 LINE L1 -366 5993 5626 6 695 315 330 9 0 chrX 14475452 14475567 -152174729 - L1MDb LINE L1 -6083 326 211 6 695 2004 203 5 3 chrX 14475999 14476374 -152173922 - ORR1C1 LTR MaLR -2 376 1 6 695 4673 232 71 29 chrX 14476378 14477430 -152172866 - ORR1C1-int LTR MaLR -4 1366 270 6 695 261 0 0 0 chrX 14477430 14477459 -152172837 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 6 695 4673 232 71 29 chrX 14477459 14477717 -152172579 - ORR1C1-int LTR MaLR -1101 269 1 6 695 1800 184 64 14 chrX 14477717 14478076 -152172220 - ORR1C1 LTR MaLR 0 378 2 6 695 2994 279 65 11 chrX 14478412 14479285 -152171011 + Lx8 LINE L1 6202 7121 -352 6 695 270 210 0 138 chrX 14479324 14479418 -152170878 + Lx8 LINE L1 7386 7466 -7 6 695 195 348 0 14 chrX 14479434 14479504 -152170792 - MIRb SINE MIR -91 177 109 6 695 777 273 113 68 chrX 14479993 14480347 -152169949 + ORR1D2 LTR MaLR 1 370 0 6 695 207 0 0 0 chrX 14480392 14480415 -152169881 + (A)n Simple_repeat Simple_repeat 1 23 0 6 695 298 273 0 49 chrX 14480464 14480545 -152169751 + MIRb SINE MIR 54 130 -138 6 695 21 36 0 0 chrX 14480965 14480993 -152169303 + AT_rich Low_complexity Low_complexity 1 28 0 6 695 279 79 0 0 chrX 14481208 14481246 -152169050 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 695 369 0 0 0 chrX 14481246 14481286 -152169010 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 695 779 261 146 14 chrX 14481520 14481789 -152168507 + ORR1D1 LTR MaLR 2 310 -74 6 695 207 171 0 0 chrX 14481970 14482005 -152168291 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 695 370 326 122 69 chrX 14482372 14482675 -152167621 - MLT1C LTR MaLR -55 412 94 6 695 226 321 158 51 chrX 14482812 14482989 -152167307 + Arthur1 DNA Tip100 373 568 -3379 6 695 281 298 112 28 chrX 14482965 14483179 -152167117 + Arthur1 DNA Tip100 3403 3634 -313 6 695 294 73 0 0 chrX 14484247 14484288 -152166008 + (T)n Simple_repeat Simple_repeat 1 41 0 6 695 913 85 14 0 chrX 14484558 14484699 -152165597 + (GA)n Simple_repeat Simple_repeat 2 144 0 6 695 182 287 30 60 chrX 14486231 14486331 -152163965 - L3 LINE CR1 -689 3800 3704 6 695 282 397 17 0 chrX 14486626 14486742 -152163554 - MamRep605 Unknown Unknown -103 773 656 6 695 324 395 59 5 chrX 14486801 14486987 -152163309 - LTR33 LTR ERVL -1 514 319 6 695 1950 131 21 40 chrX 14487800 14488127 -152162169 + ORR1A4 LTR MaLR 1 321 -8 6 695 1534 203 99 9 chrX 14488193 14488536 -152161760 + ORR1D1 LTR MaLR 1 374 0 6 695 304 21 62 0 chrX 14488661 14488709 -152161587 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 6 695 27 29 0 0 chrX 14489282 14489316 -152160980 + AT_rich Low_complexity Low_complexity 1 34 0 6 695 9557 99 19 10 chrX 14489359 14490914 -152159382 - Lx3_Mus LINE L1 -5 7004 5438 6 695 209 283 0 16 chrX 14490917 14490978 -152159318 + (TATG)n Simple_repeat Simple_repeat 1 60 0 6 695 1176 311 35 31 chrX 14491012 14491466 -152158830 - Lx9 LINE L1 -187 7457 7002 6 695 1229 289 62 3 chrX 14491475 14491815 -152158481 + Lx9 LINE L1 6373 6732 -912 6 695 1034 314 42 58 chrX 14491827 14492446 -152157850 + RLTR18B LTR ERVK 5 614 -2 6 695 919 272 38 0 chrX 14492450 14492685 -152157611 + Lx9 LINE L1 6735 6978 -666 6 695 735 302 95 16 chrX 14493009 14493389 -152156907 + L1M2 LINE L1 3843 4252 -1891 6 695 27628 163 44 69 chrX 14493393 14495089 -152155207 + L1_Mus2 LINE L1 220 1908 -3975 6 695 450 0 0 0 chrX 14495089 14495139 -152155157 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 6 695 27628 126 18 4 chrX 14495139 14499729 -152150567 + L1_Mus2 LINE L1 1909 6565 -1 6 695 270 250 134 32 chrX 14499841 14499998 -152150298 + L1M2 LINE L1 4240 4412 -1731 6 695 1056 261 28 42 chrX 14500015 14500303 -152149993 + MTEb LTR MaLR 96 379 0 1 695 1115 274 56 16 chrX 14500303 14500625 -152149671 + MTEb-int LTR MaLR 1 335 -1245 1 695 802 293 94 50 chrX 14500626 14501284 -152149012 + L1MA4A LINE L1 5170 5906 -397 2 695 355 325 0 34 chrX 14501764 14501882 -152148414 + B4A SINE B4 179 292 0 3 695 183 80 0 0 chrX 14501904 14501929 -152148367 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 695 240 35 0 0 chrX 14502713 14502742 -152147554 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 695 1112 284 33 29 chrX 14502768 14503044 -152147252 - B4A SINE B4 -3 289 13 6 695 508 301 40 57 chrX 14503075 14503371 -152146925 + B4A SINE B4 2 292 0 7 695 355 282 56 59 chrX 14503573 14503934 -152146362 + L1ME1 LINE L1 5819 6331 -3 8 695 4064 169 0 1 chrX 14504076 14504730 -152145566 - Lx4A LINE L1 -1 7057 6405 9 695 737 103 102 7 chrX 14504774 14504911 -152145385 + L1_Mur2 LINE L1 3301 3450 -2427 1 695 330 357 101 52 chrX 14505101 14505408 -152144888 - LTR16E2 LTR ERVL -22 546 225 1 695 1627 85 0 9 chrX 14505660 14505885 -152144411 - L1Md_F2 LINE L1 -12 6570 6348 1 695 208 196 22 0 chrX 14506169 14506215 -152144081 + MER5B DNA MER1_type 119 165 -13 1 695 468 0 0 0 chrX 14506287 14506339 -152143957 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 695 322 371 12 29 chrX 14506349 14506521 -152143775 + MLT1E1A LTR MaLR 432 600 -80 1 695 563 0 0 15 chrX 14506572 14506640 -152143656 + (CATATA)n Simple_repeat Simple_repeat 4 70 0 1 695 14815 139 12 10 chrX 14507274 14512632 -152137664 + L1_Mus4 LINE L1 369 6629 -7 1 695 396 209 0 0 chrX 14512634 14512725 -152137571 + (TA)n Simple_repeat Simple_repeat 1 91 0 1 695 649 290 83 0 chrX 14512753 14512922 -152137374 - B3 SINE B2 -3 213 31 1 695 433 121 0 39 chrX 14513124 14513227 -152137069 + (CAGAGA)n Simple_repeat Simple_repeat 2 100 0 2 695 620 291 109 41 chrX 14513246 14513540 -152136756 + Lx9 LINE L1 6880 7193 -451 2 695 405 314 41 61 chrX 14513671 14513868 -152136428 + MLT1E1A LTR MaLR 407 599 -55 2 695 264 254 0 0 chrX 14513875 14513930 -152136366 - RMER30 DNA MER1_type -2 200 146 2 695 432 296 136 0 chrX 14513930 14514062 -152136234 - RMER30 DNA MER1_type -17 185 36 2 695 556 305 40 0 chrX 14514118 14514295 -152136001 + MLT1E1A-int LTR MaLR 4 187 -1184 2 695 28539 121 44 28 chrX 14514300 14515592 -152134704 + L1_Mus1 LINE L1 404 1718 -4165 2 695 1075 90 0 7 chrX 14515592 14515738 -152134558 + B1_Mm SINE Alu 1 145 -2 2 695 28539 107 6 12 chrX 14515738 14520617 -152129679 + L1_Mus1 LINE L1 1719 6566 -1 2 695 21 57 0 0 chrX 14520654 14520689 -152129607 + AT_rich Low_complexity Low_complexity 1 35 0 2 695 255 299 193 51 chrX 14520713 14520967 -152129329 + MLT1E1A-int LTR MaLR 207 496 -993 2 695 302 330 145 18 chrX 14520985 14521213 -152129083 + MLT1E1A-int LTR MaLR 557 813 -676 2 695 812 276 56 10 chrX 14521230 14521428 -152128868 + B3 SINE B2 8 214 -2 2 695 1491 314 67 43 chrX 14521413 14522083 -152128213 + MLT1E1A-int LTR MaLR 804 1489 0 2 695 230 383 0 41 chrX 14522086 14522184 -152128112 + MLT1E1A LTR MaLR 8 101 -579 2 695 636 353 27 42 chrX 14522489 14522752 -152127544 + MLT1E1A LTR MaLR 418 676 -4 2 695 376 335 18 35 chrX 14522909 14523079 -152127217 - MER5A DNA MER1_type -22 167 1 2 695 225 297 40 13 chrX 14523503 14523578 -152126718 - MIRc SINE MIR -78 190 114 2 695 276 253 67 67 chrX 14523578 14523591 -152126705 + MT2B LTR ERVL 151 163 -438 3 695 475 245 94 0 chrX 14523591 14523697 -152126599 + B1_Mur1 SINE Alu 2 117 -32 3 695 1343 206 18 139 chrX 14523708 14524097 -152126199 + ORR1D1 LTR MaLR 1 342 -32 3 695 234 0 0 0 chrX 14524114 14524140 -152126156 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 3 695 9051 101 15 2 chrX 14524313 14525746 -152124550 + L1_Mur1 LINE L1 2027 3478 -2408 3 695 6022 101 5 80 chrX 14525744 14526547 -152123749 + L1_Mur1 LINE L1 4557 5295 -591 3 695 2017 66 33 4 chrX 14526547 14526820 -152123476 + L1Md_F2 LINE L1 6289 6569 -13 3 695 6022 101 5 80 chrX 14526820 14527133 -152123163 + L1_Mur1 LINE L1 5296 5590 -296 3 695 23745 140 27 13 chrX 14527187 14530671 -152119625 + L1_Mus2 LINE L1 504 4016 -1867 3 695 1125 88 0 0 chrX 14530671 14530819 -152119477 + B1_Mus1 SINE Alu 1 148 0 3 695 23745 121 12 15 chrX 14530819 14532174 -152118122 + L1_Mus2 LINE L1 4017 5320 -563 3 695 7100 76 5 2 chrX 14533201 14534436 -152115860 + L1_Mus2 LINE L1 5327 6564 -2 3 695 315 19 58 0 chrX 14534467 14534519 -152115777 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 3 695 8137 112 50 15 chrX 14534532 14535906 -152114390 + Lx3_Mus LINE L1 5587 7008 -1 3 695 2482 80 3 3 chrX 14535910 14536285 -152114011 + MusHAL1 LINE L1 1676 2050 -662 4 695 1479 129 94 0 chrX 14536287 14536573 -152113723 + L1_Mm LINE L1 4034 4346 -1537 4 695 1225 98 5 0 chrX 14538262 14538446 -152111850 - L1_Mm LINE L1 -777 5106 4922 4 695 31088 71 17 43 chrX 14538459 14543679 -152106617 + L1Md_A LINE L1 503 5586 -297 4 695 8235 37 3 0 chrX 14543679 14544672 -152105624 + L1Md_A LINE L1 5587 6582 0 4 695 945 299 81 3 chrX 14544672 14544957 -152105339 - MTE-int LTR MaLR -165 1415 1109 4 695 3601 69 8 8 chrX 14545014 14545495 -152104801 + LTRIS2 LTR ERV1 5 485 -79 4 695 2245 58 0 0 chrX 14545508 14545801 -152104495 + L1Md_F2 LINE L1 5288 5580 -303 4 695 7981 49 2 7 chrX 14545806 14546805 -152103491 + L1Md_F2 LINE L1 5587 6580 -2 4 695 1140 69 38 0 chrX 14546832 14546991 -152103305 + L1_Mus1 LINE L1 6403 6567 0 4 695 236 177 242 0 chrX 14547329 14547391 -152102905 - PB1D10 SINE Alu -10 107 31 4 695 347 252 98 8 chrX 14548260 14548358 -152101938 - L1MA6 LINE L1 -3 6297 6188 4 695 387 0 0 0 chrX 14548358 14548401 -152101895 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 695 347 252 98 8 chrX 14548401 14548434 -152101862 - L1MA6 LINE L1 -113 6187 6155 4 695 347 265 0 64 chrX 14548446 14548555 -152101741 + L1MA6 LINE L1 6064 6165 -135 4 696 273 363 16 46 chrX 14550118 14550281 -152100015 + MLT1J1 LTR MaLR 46 204 -244 5 696 422 239 23 0 chrX 14550463 14550551 -152099745 + PB1D10 SINE Alu 22 111 -6 5 696 2122 169 18 0 chrX 14550769 14551166 -152099130 - L1_Mm LINE L1 -313 5570 5167 5 696 441 382 65 29 chrX 14551185 14551597 -152098699 + L2 LINE L2 212 638 -2781 5 696 785 334 49 151 chrX 14551597 14552482 -152097814 + L2 LINE L2 2004 2797 -622 5 696 375 23 0 0 chrX 14552986 14553030 -152097266 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 696 198 0 0 0 chrX 14553030 14553051 -152097245 + (TA)n Simple_repeat Simple_repeat 2 23 0 5 696 250 356 94 15 chrX 14553058 14553323 -152096973 - B4A SINE B4 -2 290 5 5 696 433 316 66 33 chrX 14553491 14553674 -152096622 - MIR SINE MIR -4 258 70 5 696 229 326 60 40 chrX 14554115 14554265 -152096031 - MER121 Unknown Unknown -224 188 36 5 696 22 0 0 0 chrX 14554778 14554800 -152095496 + AT_rich Low_complexity Low_complexity 1 22 0 6 696 1037 191 120 12 chrX 14554801 14554984 -152095312 - Lx9 LINE L1 -1 7643 7436 6 696 207 69 0 0 chrX 14554984 14555013 -152095283 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 696 1037 191 120 12 chrX 14555013 14555163 -152095133 - Lx9 LINE L1 -209 7435 7274 6 696 338 327 0 60 chrX 14555267 14555384 -152094912 - PB1 SINE Alu -8 119 10 6 696 275 299 11 29 chrX 14556081 14556183 -152094113 + ID2 SINE ID 3 102 -50 6 696 25 31 0 0 chrX 14556722 14556754 -152093542 + AT_rich Low_complexity Low_complexity 1 32 0 6 696 240 226 32 0 chrX 14556791 14556853 -152093443 - L1MD3 LINE L1 -91 7904 7841 6 696 702 98 0 0 chrX 14557051 14557173 -152093123 + (GA)n Simple_repeat Simple_repeat 1 122 0 6 696 282 243 162 0 chrX 14557187 14557261 -152093035 + B4 SINE B4 192 277 -15 6 696 714 261 98 11 chrX 14557360 14557646 -152092650 - L1MD3 LINE L1 -173 7822 7512 6 696 234 220 60 0 chrX 14557704 14557754 -152092542 + Lx6 LINE L1 7258 7310 -150 6 696 288 111 0 0 chrX 14557754 14557808 -152092488 + (TC)n Simple_repeat Simple_repeat 1 54 0 7 696 180 0 0 0 chrX 14557808 14557828 -152092468 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 696 190 0 32 32 chrX 14557858 14557889 -152092407 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 7 696 648 274 59 0 chrX 14557894 14558047 -152092249 + MTC LTR MaLR 208 369 -52 7 696 2726 208 49 5 chrX 14558095 14558705 -152091591 + Lx9 LINE L1 6301 6937 -707 7 696 6891 153 43 18 chrX 14558713 14560057 -152090239 + ORR1A2-int LTR MaLR 509 1963 0 7 696 2061 111 39 0 chrX 14560057 14560364 -152089932 + ORR1A2 LTR MaLR 1 319 -8 7 696 288 77 0 0 chrX 14560690 14560729 -152089567 + (TA)n Simple_repeat Simple_repeat 1 39 0 7 696 24 32 0 0 chrX 14560739 14560770 -152089526 + AT_rich Low_complexity Low_complexity 1 31 0 7 696 614 264 33 63 chrX 14560828 14561099 -152089197 + L1MB2 LINE L1 5319 5581 -602 7 696 330 329 67 85 chrX 14561099 14561381 -152088915 - RMER10A LTR ERVL -148 294 18 7 696 380 313 10 0 chrX 14561471 14561570 -152088726 + B3A SINE B2 64 163 -35 8 696 666 257 153 7 chrX 14561619 14561809 -152088487 + B3A SINE B2 1 214 -2 8 696 418 271 146 69 chrX 14561824 14562100 -152088196 + L1MB2 LINE L1 5586 5881 -290 7 696 894 249 96 90 chrX 14562111 14562487 -152087809 - RMER17C LTR ERVK -32 378 1 8 696 4481 154 47 23 chrX 14562495 14562828 -152087468 - RMER17C-int LTR ERVK 0 3238 2875 8 696 378 0 0 0 chrX 14562828 14562870 -152087426 + (TA)n Simple_repeat Simple_repeat 2 43 0 8 696 4481 153 63 51 chrX 14562870 14563859 -152086437 - RMER17C-int LTR ERVK -364 2874 1999 8 696 2929 93 7 0 chrX 14563859 14564277 -152086019 - BGLII LTR ERVK 0 421 1 8 696 2971 152 77 77 chrX 14564277 14564486 -152085810 - RMER17C-int LTR ERVK -1240 1998 1776 8 696 2230 141 12 83 chrX 14564489 14564992 -152085304 - RMER17C-int LTR ERVK -1675 1563 1097 8 696 887 63 0 0 chrX 14565035 14565146 -152085150 - B1_Mm SINE Alu -13 134 24 8 696 384 196 0 124 chrX 14565057 14565162 -152085134 - MT2B LTR ERVL -337 264 173 8 696 1629 107 0 16 chrX 14565448 14565695 -152084601 + L1Md_F2 LINE L1 6328 6570 -12 8 696 1199 258 79 70 chrX 14565987 14566597 -152083699 - RMER17C-int LTR ERVK -2623 615 1 8 696 749 243 114 98 chrX 14566599 14566806 -152083490 - RMER17C LTR ERVK -35 375 132 8 696 983 73 0 7 chrX 14566806 14566944 -152083352 + (GAA)n Simple_repeat Simple_repeat 3 139 0 8 696 749 243 114 98 chrX 14566944 14567105 -152083191 - RMER17C LTR ERVK -279 131 1 8 696 352 229 26 7 chrX 14567110 14567238 -152083058 + L1MB2 LINE L1 5900 6033 -156 7 696 347 310 51 8 chrX 14567305 14567422 -152082874 + B3 SINE B2 88 209 -7 8 696 381 127 0 0 chrX 14567429 14567508 -152082788 + (CAGT)n Simple_repeat Simple_repeat 2 80 0 9 696 1444 178 65 55 chrX 14567509 14567800 -152082496 - ORR1B2 LTR MaLR -2 365 72 9 696 186 43 0 0 chrX 14568001 14568024 -152082272 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 9 696 237 372 30 55 chrX 14568333 14568498 -152081798 - RSINE1 SINE B4 -1 164 4 9 696 605 336 37 38 chrX 14568565 14568940 -152081356 - ORR1E LTR MaLR 0 370 1 9 696 2934 312 96 38 chrX 14568940 14570345 -152079951 - ORR1E-int LTR MaLR -53 1527 11 9 696 740 239 67 0 chrX 14570402 14570611 -152079685 - Lx8 LINE L1 -87 7386 7164 9 696 419 239 9 0 chrX 14570881 14570970 -152079326 + PB1D10 SINE Alu 8 102 -25 9 696 306 0 0 0 chrX 14570978 14571012 -152079284 + (CATA)n Simple_repeat Simple_repeat 2 35 0 9 696 295 250 26 46 chrX 14571039 14571129 -152079167 - ID4 SINE ID -52 100 10 9 696 1498 218 72 32 chrX 14571742 14572145 -152078151 - MTD LTR MaLR 0 419 1 9 696 1177 234 144 22 chrX 14572645 14572964 -152077332 + ORR1D1 LTR MaLR 11 368 -6 1 696 287 279 0 0 chrX 14573098 14573159 -152077137 - ID_B1 SINE B4 -34 190 130 1 696 19975 156 26 16 chrX 14573161 14575209 -152075087 - Lx LINE L1 -12 6642 4644 1 696 262 0 53 0 chrX 14575209 14575247 -152075049 + (TTTG)n Simple_repeat Simple_repeat 3 42 0 1 696 19975 175 34 16 chrX 14575247 14579152 -152071144 - Lx LINE L1 -1240 4643 591 1 696 424 327 61 67 chrX 14579152 14579332 -152070964 - ID_B1 SINE B4 -26 198 20 1 696 796 196 9 15 chrX 14579633 14579804 -152070492 - BGLII_B LTR ERVK -5 436 233 1 696 943 344 10 56 chrX 14579896 14580157 -152070139 - B4A SINE B4 0 292 31 1 696 225 94 0 0 chrX 14580157 14580189 -152070107 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 696 943 344 10 56 chrX 14580189 14580229 -152070067 - B4A SINE B4 -262 30 5 1 696 284 316 69 60 chrX 14580829 14580969 -152069327 - B1F SINE Alu 0 149 7 1 696 251 308 47 32 chrX 14581046 14581203 -152069093 + MIR SINE MIR 101 265 -3 1 696 584 343 0 0 chrX 14581321 14581461 -152068835 + RSINE1 SINE B4 24 163 -2 1 696 24 53 0 0 chrX 14581473 14581511 -152068785 + AT_rich Low_complexity Low_complexity 1 38 0 1 696 538 256 30 15 chrX 14581932 14582063 -152068233 + ORR1D2 LTR MaLR 3 135 -235 1 696 426 361 46 81 chrX 14582201 14582698 -152067598 + L3 LINE CR1 3665 4144 -345 1 696 307 288 37 12 chrX 14582983 14583064 -152067232 + LTR33 LTR ERVL 421 503 -12 1 696 292 337 89 6 chrX 14583612 14583791 -152066505 + L3 LINE CR1 4281 4474 -15 1 696 3581 10 2 0 chrX 14584616 14585011 -152065285 + MTA_Mm LTR MaLR 1 396 0 1 696 9775 12 0 0 chrX 14585011 14586109 -152064187 + MTA_Mm-int LTR MaLR 1 1098 0 1 696 3581 10 2 0 chrX 14586109 14586504 -152063792 + MTA_Mm LTR MaLR 1 396 0 1 696 825 215 13 89 chrX 14587272 14587507 -152062789 - ORR1C2 LTR MaLR 0 384 168 1 696 326 287 37 79 chrX 14587518 14587554 -152062742 - ORR1C2 LTR MaLR -192 186 149 1 696 387 0 0 0 chrX 14587554 14587597 -152062699 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 696 315 0 0 0 chrX 14587597 14587631 -152062665 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 696 326 287 37 79 chrX 14587631 14587782 -152062514 - ORR1C2 LTR MaLR -230 148 7 1 696 33 73 0 0 chrX 14588543 14588611 -152061685 + AT_rich Low_complexity Low_complexity 1 68 0 1 696 180 277 0 0 chrX 14588617 14588664 -152061632 - L2a LINE L2 -15 3411 3365 1 696 26629 122 14 11 chrX 14588759 14594937 -152055359 + L1_Mus3 LINE L1 433 6630 -8 1 696 329 299 92 58 chrX 14596326 14596500 -152053796 - MLT1H LTR MaLR -310 239 60 1 696 356 283 35 0 chrX 14596582 14596691 -152053605 + PB1D9 SINE Alu 1 113 -7 1 696 24 32 0 0 chrX 14596734 14596765 -152053531 + AT_rich Low_complexity Low_complexity 1 31 0 1 696 377 39 20 0 chrX 14596830 14596881 -152053415 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 696 242 284 75 0 chrX 14596986 14597120 -152053176 - L1MA4 LINE L1 -370 5930 5787 1 696 1521 194 131 17 chrX 14597141 14597492 -152052804 - MTC LTR MaLR -22 399 9 1 696 6938 36 6 0 chrX 14597557 14598435 -152051861 - L1Md_F3 LINE L1 -2 6582 5700 1 696 10707 73 3 5 chrX 14598425 14599937 -152050359 - L1_Mm LINE L1 -686 5197 3690 1 696 3451 32 136 0 chrX 14599937 14600371 -152049925 - MT2_Mm LTR ERVL 0 493 1 1 696 302 0 0 0 chrX 14600371 14600409 -152049887 - MERVL-int LTR ERVL 0 5485 5448 1 696 348 139 26 53 chrX 14600409 14600485 -152049811 - ORR1C2-int LTR MaLR -1323 640 567 1 696 5935 37 0 0 chrX 14600485 14601213 -152049083 - MERVL-int LTR ERVL -114 5371 4644 1 696 914 43 0 0 chrX 14601215 14601330 -152048966 + MT2_Mm LTR ERVL 379 493 0 1 696 9606 19 0 0 chrX 14601332 14602430 -152047866 + MTA_Mm-int LTR MaLR 1 1098 0 1 696 3460 30 2 0 chrX 14602430 14602825 -152047471 + MTA_Mm LTR MaLR 1 396 0 1 696 1863 51 0 23 chrX 14602825 14603087 -152047209 - L1_Mm LINE L1 -2189 3694 3439 1 696 478 295 0 0 chrX 14603113 14603218 -152047078 + RSINE1 SINE B4 4 108 -57 1 696 387 0 0 0 chrX 14603241 14603284 -152047012 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 696 21 0 0 0 chrX 14603319 14603340 -152046956 + AT_rich Low_complexity Low_complexity 1 21 0 1 696 277 317 43 22 chrX 14603394 14603578 -152046718 + L1M5 LINE L1 5598 5785 -339 1 696 29699 77 35 1 chrX 14604414 14610557 -152039739 - L1Md_F2 LINE L1 -2 6580 213 1 696 705 278 5 0 chrX 14610734 14610921 -152039375 + Lx5 LINE L1 6250 6437 -613 1 696 373 88 35 0 chrX 14610930 14610987 -152039309 + RMER6D LTR ERVK 3 61 -659 1 696 480 48 0 0 chrX 14611124 14611187 -152039109 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 696 354 61 0 0 chrX 14611187 14611235 -152039061 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 696 1836 154 33 10 chrX 14611500 14611822 -152038474 + RMER13A LTR ERVK 1 368 -540 1 696 232 175 0 24 chrX 14611797 14611838 -152038458 - RMER13A LTR ERVK -820 40 1 1 696 550 299 11 11 chrX 14612007 14612196 -152038100 - Lx8 LINE L1 -318 7155 6967 1 696 288 182 15 0 chrX 14612264 14612330 -152037966 + B3 SINE B2 150 216 0 1 696 225 0 0 0 chrX 14612446 14612471 -152037825 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 696 440 289 134 21 chrX 14612524 14612718 -152037578 - B3 SINE B2 0 216 1 1 696 436 286 19 9 chrX 14612755 14612861 -152037435 + PB1D10 SINE Alu 1 107 -10 1 696 252 295 239 15 chrX 14612861 14612888 -152037408 + B4A SINE B4 86 248 -44 1 696 301 271 0 76 chrX 14612937 14613029 -152037267 + L1MD LINE L1 5209 5293 -853 1 696 251 235 29 19 chrX 14613067 14613171 -152037125 + L1ME1 LINE L1 5387 5491 -688 1 696 592 253 41 31 chrX 14613270 14613359 -152036937 + L1ME1 LINE L1 5694 5778 -401 1 696 1457 232 39 3 chrX 14613359 14613714 -152036582 - ORR1D2 LTR MaLR -2 368 1 1 696 592 253 41 31 chrX 14613714 14613820 -152036476 + L1ME1 LINE L1 5779 5891 -288 1 696 246 284 19 10 chrX 14613945 14614048 -152036248 + L1MA10 LINE L1 6228 6331 -3 1 696 306 279 51 0 chrX 14615841 14615920 -152034376 - MER2 DNA MER2_type -12 333 251 1 696 2223 164 62 17 chrX 14615929 14616332 -152033964 + MTC LTR MaLR 1 421 0 1 696 518 299 75 62 chrX 14616332 14616478 -152033818 + RSINE1 SINE B4 4 151 -14 1 696 1038 128 0 0 chrX 14616539 14616687 -152033609 + B1_Mus1 SINE Alu 1 148 0 1 696 627 268 134 29 chrX 14616732 14616970 -152033326 - MER2 DNA MER2_type -82 263 1 1 696 1172 61 0 0 chrX 14617223 14617370 -152032926 - B1_Mus2 SINE Alu 0 147 1 1 696 560 355 78 96 chrX 14617963 14618355 -152031941 - MLT1F2 LTR MaLR 0 560 182 1 696 1085 76 7 0 chrX 14618355 14618499 -152031797 - B1_Mus2 SINE Alu -2 145 1 1 696 560 355 78 96 chrX 14618499 14618554 -152031742 - MLT1F2 LTR MaLR -379 181 121 1 696 429 20 0 0 chrX 14618599 14618649 -152031647 + (TGG)n Simple_repeat Simple_repeat 2 51 0 1 696 536 279 43 25 chrX 14618670 14618832 -152031464 + Tigger5 DNA MER2_type 70 234 -2172 1 696 316 304 54 0 chrX 14618949 14619041 -152031255 - MLT1F2 LTR MaLR -450 110 14 1 696 231 343 47 40 chrX 14619397 14619546 -152030750 + MIR SINE MIR 54 203 -59 1 696 374 274 57 116 chrX 14620847 14621062 -152029234 - MTEa LTR MaLR 0 379 152 1 696 468 0 0 0 chrX 14621160 14621212 -152029084 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 696 819 80 0 0 chrX 14621395 14621507 -152028789 + (TTTC)n Simple_repeat Simple_repeat 1 112 0 1 696 2309 113 20 0 chrX 14621534 14621889 -152028407 - L1_Mus4 LINE L1 0 6636 6275 1 696 3136 213 47 9 chrX 14622049 14622732 -152027564 - Lx6 LINE L1 -6 7454 6746 1 696 8191 108 32 10 chrX 14622733 14623970 -152026326 - Lx3_Mus LINE L1 0 7009 5745 1 696 2214 118 0 14 chrX 14623970 14624315 -152025981 + Lx3_Mus LINE L1 5409 5748 -138 1 696 3514 227 26 16 chrX 14624333 14624944 -152025352 - Lx6 LINE L1 -714 6746 6117 1 696 2396 144 154 12 chrX 14624944 14625456 -152024840 - RMER4B LTR ERVK 0 585 1 1 696 3514 227 26 16 chrX 14625456 14625651 -152024645 - Lx6 LINE L1 -1344 6116 5932 1 696 11311 181 38 62 chrX 14625654 14626487 -152023809 - Lx6 LINE L1 -390 5490 4737 1 696 393 75 0 0 chrX 14626487 14626540 -152023756 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 696 11311 181 38 62 chrX 14626540 14627196 -152023100 - Lx6 LINE L1 -1144 4736 4065 1 696 303 93 0 0 chrX 14627196 14627239 -152023057 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1 696 995 135 0 0 chrX 14627243 14627384 -152022912 - B1_Mus1 SINE Alu -7 141 1 1 696 11311 181 38 62 chrX 14627384 14627847 -152022449 - Lx6 LINE L1 -1816 4064 3598 1 696 4340 150 53 0 chrX 14627847 14628547 -152021749 - RMER19A LTR ERVK 0 737 1 1 696 11311 181 38 62 chrX 14628547 14628945 -152021351 - Lx6 LINE L1 -2283 3597 3181 1 696 216 0 0 0 chrX 14628945 14628969 -152021327 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 696 11311 181 38 62 chrX 14628969 14629448 -152020848 - Lx6 LINE L1 -2700 3180 2738 1 696 207 0 0 0 chrX 14629448 14629471 -152020825 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1 696 11311 181 38 62 chrX 14629471 14629711 -152020585 - Lx6 LINE L1 -3143 2737 2492 1 696 231 358 73 13 chrX 14629903 14630053 -152020243 - MLT1H LTR MaLR -346 203 45 1 696 479 308 75 21 chrX 14630579 14630765 -152019531 - MTEb LTR MaLR 0 379 184 1 696 4133 201 58 33 chrX 14630969 14631855 -152018441 - RMER13B LTR ERVK 0 908 1 1 696 188 302 0 0 chrX 14632870 14632913 -152017383 - MIRb SINE MIR -21 247 205 1 696 609 267 0 0 chrX 14633213 14633344 -152016952 - B1F SINE Alu -6 143 13 1 696 489 217 85 0 chrX 14633369 14633475 -152016821 - PB1D9 SINE Alu -5 115 1 1 696 450 349 21 54 chrX 14633654 14633896 -152016400 - Tigger5 DNA MER2_type -2172 234 1 1 696 415 275 26 35 chrX 14634066 14634179 -152016117 - PB1D7 SINE Alu -6 114 3 1 696 383 307 164 41 chrX 14634181 14634449 -152015847 + L2a LINE L2 3107 3407 -19 1 696 1624 219 74 57 chrX 14634624 14635030 -152015266 - MTD LTR MaLR -6 413 1 1 696 1111 278 62 22 chrX 14635156 14635524 -152014772 + Lx8 LINE L1 6967 7349 -124 1 696 582 300 70 5 chrX 14635730 14635931 -152014365 + B3 SINE B2 3 216 0 1 696 21 57 0 0 chrX 14636426 14636461 -152013835 + AT_rich Low_complexity Low_complexity 1 35 0 1 696 275 248 115 29 chrX 14637161 14637265 -152013031 + ORR1E LTR MaLR 262 374 0 1 696 551 297 0 0 chrX 14637544 14637682 -152012614 + B1_Mur1 SINE Alu 2 139 -10 1 696 213 179 0 67 chrX 14637688 14637730 -152012566 + polypurine Low_complexity Low_complexity 2 40 0 1 696 660 26 0 0 chrX 14637730 14637808 -152012488 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 1 696 213 179 0 67 chrX 14637808 14637825 -152012471 + polypurine Low_complexity Low_complexity 41 57 0 1 696 4259 43 0 2 chrX 14637850 14638364 -152011932 + L1Md_F2 LINE L1 6067 6579 -3 1 696 272 284 75 47 chrX 14638709 14638816 -152011480 - MLT1E1A LTR MaLR -71 609 500 1 696 785 154 47 62 chrX 14639201 14639384 -152010912 - ORR1D1 LTR MaLR -211 163 1 1 696 464 274 82 0 chrX 14639386 14639521 -152010775 - Lx8 LINE L1 -773 6700 6555 2 696 820 315 105 40 chrX 14639535 14639889 -152010407 + MTD LTR MaLR 1 417 -2 2 696 623 229 7 0 chrX 14639895 14640039 -152010257 - Lx8 LINE L1 -945 6528 6384 2 696 226 264 88 0 chrX 14640077 14640168 -152010128 + ORR1D1 LTR MaLR 262 360 -14 2 696 638 389 101 25 chrX 14640171 14640569 -152009727 + LTR16C LTR ERVL 62 489 0 2 696 475 387 5 5 chrX 14641377 14641572 -152008724 + MER58A DNA MER1_type 1 195 -29 2 696 2093 168 33 45 chrX 14641900 14642323 -152007973 - Lx LINE L1 -4 6650 6233 2 696 689 329 42 51 chrX 14643197 14643552 -152006744 - ORR1E LTR MaLR -7 352 1 2 696 32462 78 3 5 chrX 14643939 14650336 -151999960 - L1Md_F2 LINE L1 -10 6572 188 2 696 622 308 115 32 chrX 14650405 14650650 -151999646 - MER2 DNA MER2_type 0 345 88 2 696 234 0 0 0 chrX 14650650 14650676 -151999620 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 2 696 622 308 115 32 chrX 14650676 14650742 -151999554 - MER2 DNA MER2_type -258 87 8 2 696 1296 193 142 22 chrX 14651384 14651576 -151998720 - RMER17C LTR ERVK 0 410 214 2 696 315 0 0 0 chrX 14651576 14651611 -151998685 + (GA)n Simple_repeat Simple_repeat 2 36 0 2 696 1296 193 142 22 chrX 14651611 14651784 -151998512 - RMER17C LTR ERVK -197 213 1 2 696 1902 139 192 2 chrX 14651784 14652341 -151997955 - RMER17C-int LTR ERVK 0 3238 2576 2 696 1085 121 25 5 chrX 14652355 14652555 -151997741 - RMER17C-int LTR ERVK -879 2359 2156 2 696 3064 241 123 82 chrX 14652574 14654485 -151995811 - RMER17C-int LTR ERVK -1215 2023 34 2 696 1493 21 31 10 chrX 14655567 14655763 -151994533 - L1Md_F3 LINE L1 -2 6582 6383 2 696 723 130 0 0 chrX 14656551 14656674 -151993622 + (TC)n Simple_repeat Simple_repeat 2 124 0 2 696 345 301 43 50 chrX 14656858 14656998 -151993298 - MER5A DNA MER1_type -3 186 48 2 696 347 351 15 0 chrX 14657144 14657278 -151993018 - RMER15 LTR ERVL -13 562 427 2 696 346 344 32 19 chrX 14657417 14657574 -151992722 + RMER15 LTR ERVL 371 529 -46 2 696 195 42 0 0 chrX 14658218 14658242 -151992054 + (GAA)n Simple_repeat Simple_repeat 1 24 0 2 696 2472 330 48 40 chrX 14658245 14659539 -151990757 + RMER15-int LTR ERVL 767 2070 -2929 2 696 616 291 11 6 chrX 14660263 14660443 -151989853 + RMER15-int LTR ERVL 2047 2227 -2772 2 696 458 298 30 0 chrX 14660476 14660607 -151989689 + RMER15-int LTR ERVL 2331 2465 -2534 2 696 889 304 150 11 chrX 14660748 14661200 -151989096 + Lx8 LINE L1 6262 6776 -697 2 696 692 231 74 20 chrX 14662464 14662667 -151987629 + B3 SINE B2 3 216 0 2 696 228 347 62 14 chrX 14663916 14664062 -151986234 + MIR SINE MIR 108 260 -2 2 696 210 310 35 0 chrX 14664476 14664534 -151985762 + L2c LINE L2 3290 3349 -38 2 696 241 60 19 57 chrX 14664534 14664587 -151985709 + (CAAAAA)n Simple_repeat Simple_repeat 4 54 0 2 696 3789 77 0 0 chrX 14664728 14665222 -151985074 - L1_Mus1 LINE L1 0 6567 6074 2 696 600 364 73 27 chrX 14666299 14666629 -151983667 - LTR16A LTR ERVL 0 451 107 2 696 1168 112 44 11 chrX 14668124 14668305 -151981991 - B2_Mm2 SINE B2 -7 188 2 2 696 447 19 0 0 chrX 14668572 14668624 -151981672 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 696 257 239 59 15 chrX 14668636 14668685 -151981611 - MTE2a LTR MaLR -2 377 326 2 696 2239 196 104 23 chrX 14668685 14669184 -151981112 + RMER19B LTR ERVK 1 520 -382 2 696 909 147 57 0 chrX 14669179 14669336 -151980960 + RMER19B LTR ERVK 730 895 -7 2 696 283 208 0 0 chrX 14669357 14669410 -151980886 - RMER19B LTR ERVK -208 694 642 2 696 1621 174 168 3 chrX 14669436 14669775 -151980521 - RMER19B LTR ERVK -507 395 1 2 696 264 300 0 14 chrX 14669775 14669846 -151980450 - MTE2a LTR MaLR -66 313 244 2 696 378 253 248 22 chrX 14669872 14670094 -151980202 - MTE-int LTR MaLR 0 1580 1309 2 696 249 202 31 31 chrX 14670926 14671023 -151979273 + (TATAA)n Simple_repeat Simple_repeat 2 98 0 2 696 222 104 12 72 chrX 14671110 14671193 -151979103 + (TTATA)n Simple_repeat Simple_repeat 5 82 0 2 696 222 197 12 50 chrX 14671194 14671274 -151979022 + (TATAA)n Simple_repeat Simple_repeat 2 78 0 2 696 212 113 15 61 chrX 14671275 14671341 -151978955 + (TTA)n Simple_repeat Simple_repeat 3 65 0 2 696 816 57 0 0 chrX 14671664 14671770 -151978526 + (TTTTC)n Simple_repeat Simple_repeat 3 108 0 2 696 11033 52 3 4 chrX 14671911 14674055 -151976241 - L1Md_F2 LINE L1 0 6582 4441 2 696 186 261 59 44 chrX 14674251 14674319 -151975977 - L3 LINE CR1 -1635 2854 2786 2 696 255 340 79 22 chrX 14675114 14675430 -151974866 - MER52-int LTR ERV1 -3119 3972 3639 2 696 344 302 81 65 chrX 14675917 14676355 -151973941 - RLTR19-int LTR ERVK -3251 2886 2704 2 696 724 290 51 17 chrX 14676432 14676667 -151973629 - MTE-int LTR MaLR -1328 252 10 2 696 344 307 30 30 chrX 14676922 14677053 -151973243 + MTE2a LTR MaLR 1 131 -288 2 696 489 163 0 34 chrX 14677023 14677112 -151973184 - MTD LTR MaLR -333 86 1 2 696 1874 210 68 8 chrX 14677142 14677641 -151972655 - Lx9 LINE L1 -7 7637 7109 2 696 1131 184 52 4 chrX 14677643 14677872 -151972424 - RLTR28 LTR ERVL -1 523 284 2 696 850 129 14 14 chrX 14677872 14678014 -151972282 - Lx9 LINE L1 -586 7058 6917 2 696 436 296 125 7 chrX 14678025 14678161 -151972135 + MTE2a LTR MaLR 213 364 -15 2 696 1071 256 86 31 chrX 14678304 14678655 -151971641 - ORR1D2 LTR MaLR 0 370 1 2 696 2946 287 78 94 chrX 14678714 14679999 -151970297 - ORR1D2-int LTR MaLR -106 1264 1 2 10 940 270 141 24 chrX 14680007 14680333 -151969963 - ORR1D2 LTR MaLR 0 374 5 2 697 545 355 140 57 chrX 14680583 14680933 -151969363 + MTE2a LTR MaLR 1 379 0 2 697 1127 185 9 9 chrX 14682083 14682307 -151967989 - URR1B DNA MER1_type 0 225 2 2 697 24 0 0 0 chrX 14682568 14682592 -151967704 + AT_rich Low_complexity Low_complexity 1 24 0 2 697 256 250 0 0 chrX 14682657 14682717 -151967579 - Lx8 LINE L1 -543 6930 6871 2 697 23 33 0 0 chrX 14682931 14682961 -151967335 + AT_rich Low_complexity Low_complexity 1 30 0 2 697 228 67 0 0 chrX 14683001 14683031 -151967265 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 2 697 898 296 27 45 chrX 14683300 14683675 -151966621 + ORR1D2 LTR MaLR 3 370 0 2 697 30 0 0 0 chrX 14685824 14685854 -151964442 + AT_rich Low_complexity Low_complexity 1 30 0 2 697 647 266 45 7 chrX 14685861 14686016 -151964280 - RSINE1 SINE B4 0 165 5 2 697 264 318 29 52 chrX 14686190 14686326 -151963970 - MER5A DNA MER1_type -28 161 29 2 697 426 151 0 0 chrX 14686377 14686450 -151963846 + CT-rich Low_complexity Low_complexity 2 74 0 2 697 318 167 17 42 chrX 14687354 14687430 -151962866 + GA-rich Low_complexity Low_complexity 2 76 0 2 697 1169 34 28 11 chrX 14687430 14687607 -151962689 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 697 318 167 17 42 chrX 14687607 14687649 -151962647 + polypurine Low_complexity Low_complexity 77 116 0 2 697 759 221 93 0 chrX 14689343 14689547 -151960749 + URR1B DNA MER1_type 3 225 0 2 697 606 329 79 57 chrX 14689836 14690239 -151960057 + MER31B LTR ERV1 1 412 -73 2 697 352 241 127 18 chrX 14690379 14690489 -151959807 + MER31-int LTR ERV1 42 163 -4773 2 697 207 0 0 0 chrX 14690557 14690580 -151959716 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 697 728 299 15 0 chrX 14691076 14691277 -151959019 - B3 SINE B2 -12 204 1 2 697 619 240 52 81 chrX 14691353 14691625 -151958671 + MER31-int LTR ERV1 371 634 -4302 2 697 479 312 68 63 chrX 14691908 14692130 -151958166 + Lx8 LINE L1 7077 7299 -174 2 697 204 40 0 0 chrX 14692228 14692253 -151958043 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2 697 31994 85 24 10 chrX 14692280 14693596 -151956700 - L1_Mus2 LINE L1 0 6566 5385 2 697 1742 49 4 17 chrX 14693596 14693826 -151956470 - L1Md_F2 LINE L1 -1 6581 6355 2 697 31994 93 3 30 chrX 14693826 14698886 -151951410 - L1_Mus2 LINE L1 -499 5384 330 2 697 895 84 0 0 chrX 14698883 14699014 -151951282 - L1_Mm LINE L1 -4138 1745 1615 2 697 34465 81 15 7 chrX 14699013 14705033 -151945263 - L1Md_F3 LINE L1 0 6584 511 2 697 2395 119 12 7 chrX 14705034 14705458 -151944838 - MusHAL1 LINE L1 -2286 426 1 2 697 2381 187 21 8 chrX 14705428 14705494 -151944802 - L1Md_F LINE L1 -5384 1135 1063 2 697 384 59 0 0 chrX 14705494 14705545 -151944751 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 697 2381 187 21 8 chrX 14705545 14705996 -151944300 - L1Md_F LINE L1 -5457 1062 612 2 697 259 279 13 0 chrX 14705966 14706045 -151944251 - L1Md_F LINE L1 -5793 726 647 2 697 225 0 0 0 chrX 14706212 14706237 -151944059 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2 697 549 339 45 110 chrX 14706677 14707095 -151943201 - MTD LTR MaLR -16 403 13 2 697 359 330 47 26 chrX 14707157 14707350 -151942946 - B3A SINE B2 -1 197 1 2 697 543 56 0 0 chrX 14707425 14707496 -151942800 + (CA)n Simple_repeat Simple_repeat 2 72 0 2 697 1102 259 141 5 chrX 14708040 14708409 -151941887 + MTD LTR MaLR 1 419 0 2 697 1596 275 86 32 chrX 14708664 14709291 -151941005 + Lx8 LINE L1 6813 7473 0 2 697 1010 208 18 13 chrX 14709560 14709784 -151940512 + URR1B DNA MER1_type 1 225 0 2 697 1370 236 97 176 chrX 14710029 14710729 -151939567 + MTD-int LTR MaLR 605 1249 -9 2 697 556 219 8 25 chrX 14710703 14710825 -151939471 + MTD LTR MaLR 6 125 -294 2 697 340 216 39 10 chrX 14710825 14710928 -151939368 - Lx9 LINE L1 -9 7635 7530 2 697 1480 206 31 14 chrX 14710943 14711229 -151939067 + MTD LTR MaLR 129 419 0 2 697 3472 58 0 0 chrX 14711339 14711772 -151938524 + L1Md_F2 LINE L1 6127 6559 -23 2 697 486 0 0 0 chrX 14711772 14711826 -151938470 + (TAA)n Simple_repeat Simple_repeat 1 54 0 2 697 541 292 82 103 chrX 14712690 14712770 -151937526 + ORR1E LTR MaLR 1 78 -281 2 697 429 20 0 0 chrX 14712770 14712820 -151937476 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 697 541 292 82 103 chrX 14712820 14713106 -151937190 + ORR1E LTR MaLR 79 359 0 2 697 3325 286 52 65 chrX 14713136 14714347 -151935949 - Lx8 LINE L1 -134 7339 6145 2 697 460 252 58 51 chrX 14715648 14715786 -151934510 + B1_Mur1 SINE Alu 4 142 -7 2 697 213 39 0 0 chrX 14715789 14715815 -151934481 + (CAT)n Simple_repeat Simple_repeat 2 27 0 2 697 2071 305 77 40 chrX 14715995 14716126 -151934170 - Lx8 LINE L1 0 7473 7341 2 697 366 80 0 0 chrX 14716126 14716176 -151934120 + (TGG)n Simple_repeat Simple_repeat 3 52 0 2 697 2071 305 77 40 chrX 14716176 14717007 -151933289 - Lx8 LINE L1 -133 7340 6477 2 697 211 351 65 0 chrX 14717189 14717266 -151933030 + PB1D7 SINE Alu 32 113 -7 2 697 1214 262 48 93 chrX 14717307 14718048 -151932248 + MER31-int LTR ERV1 1671 2393 -2543 2 697 201 74 0 0 chrX 14718048 14718075 -151932221 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 697 1214 262 48 93 chrX 14718075 14718086 -151932210 + MER31-int LTR ERV1 2394 2394 -2542 2 697 311 321 9 0 chrX 14718086 14718198 -151932098 + PB1D7 SINE Alu 5 117 -3 2 697 1214 262 48 93 chrX 14718198 14718295 -151932001 + MER31-int LTR ERV1 2394 2483 -2453 2 697 21 0 0 0 chrX 14718296 14718317 -151931979 + AT_rich Low_complexity Low_complexity 1 21 0 2 697 371 356 20 46 chrX 14718860 14719013 -151931283 - B1F2 SINE Alu 0 149 1 2 697 252 277 0 0 chrX 14720162 14720227 -151930069 - Lx9 LINE L1 -396 7248 7184 2 697 6494 21 0 0 chrX 14720222 14720975 -151929321 + L1Md_F3 LINE L1 4834 5586 -297 2 697 8078 47 6 1 chrX 14720975 14721968 -151928328 + L1Md_F3 LINE L1 5587 6584 0 2 697 207 243 26 51 chrX 14722733 14722811 -151927485 - MER5A DNA MER1_type -29 160 85 2 697 194 0 0 37 chrX 14722826 14722853 -151927443 + (CTG)n Simple_repeat Simple_repeat 2 27 0 3 697 204 338 187 0 chrX 14723492 14723631 -151926665 + MIRc SINE MIR 83 247 -21 3 697 4209 129 36 12 chrX 14724154 14724827 -151925469 - Lx LINE L1 -23 6631 5943 3 697 4281 120 17 2 chrX 14724825 14725597 -151924699 + Lx LINE L1 5143 5923 -713 3 697 243 0 0 0 chrX 14726317 14726344 -151923952 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 697 306 0 0 0 chrX 14727496 14727530 -151922766 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 697 498 139 0 0 chrX 14728001 14728087 -151922209 + (CA)n Simple_repeat Simple_repeat 2 87 0 3 697 312 389 109 51 chrX 14728233 14728564 -151921732 - ORR1E LTR MaLR -6 353 4 3 697 316 253 160 0 chrX 14729033 14729108 -151921188 + PB1D10 SINE Alu 22 108 -9 3 697 219 69 0 0 chrX 14729109 14729138 -151921158 + (CAAT)n Simple_repeat Simple_repeat 3 31 0 3 697 233 57 29 0 chrX 14729144 14729179 -151921117 + (CAA)n Simple_repeat Simple_repeat 1 36 0 3 697 574 247 183 6 chrX 14729210 14729385 -151920911 + B3 SINE B2 8 213 -3 3 697 311 352 0 37 chrX 14729837 14729946 -151920350 - PB1D10 SINE Alu -1 116 12 3 697 1140 62 14 0 chrX 14730012 14730157 -151920139 - B1_Mus1 SINE Alu 0 148 2 3 697 22 0 0 0 chrX 14730308 14730330 -151919966 + AT_rich Low_complexity Low_complexity 1 22 0 3 697 249 275 0 80 chrX 14731025 14731100 -151919196 + B1F SINE Alu 81 149 0 3 697 216 184 0 0 chrX 14731234 14731272 -151919024 - ID2 SINE ID -38 45 8 3 697 321 47 0 0 chrX 14731367 14731410 -151918886 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 697 402 21 0 0 chrX 14731410 14731456 -151918840 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 697 244 338 57 65 chrX 14731977 14732224 -151918072 + MIRb SINE MIR 17 261 -7 3 697 21 36 0 0 chrX 14732286 14732314 -151917982 + AT_rich Low_complexity Low_complexity 1 28 0 3 697 359 113 16 0 chrX 14732764 14732826 -151917470 + (TA)n Simple_repeat Simple_repeat 1 63 0 3 697 423 0 0 0 chrX 14732899 14732946 -151917350 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 697 249 335 156 32 chrX 14733307 14733666 -151916630 + L2b LINE L2 2776 3185 -202 3 697 744 71 0 0 chrX 14735085 14735197 -151915099 + (TTTTG)n Simple_repeat Simple_repeat 2 113 0 3 697 1047 95 0 0 chrX 14735197 14735334 -151914962 - B1_Mm SINE Alu -9 138 2 3 697 272 330 49 20 chrX 14735374 14735476 -151914820 - B4A SINE B4 -187 105 1 3 697 231 310 97 29 chrX 14735518 14735621 -151914675 + ORR1E LTR MaLR 4 113 -246 3 697 226 268 0 0 chrX 14736186 14736242 -151914054 + CT-rich Low_complexity Low_complexity 1 56 0 3 697 1930 322 112 32 chrX 14736640 14737494 -151912802 - Lx8 LINE L1 -2 7471 6549 3 697 290 368 95 54 chrX 14737524 14737947 -151912349 + L2 LINE L2 2390 2829 -590 3 697 1189 128 22 31 chrX 14738317 14738543 -151911753 - Lx2 LINE L1 -11 6986 6763 3 697 5815 164 41 3 chrX 14738543 14739800 -151910496 - Lx2 LINE L1 -365 6632 5312 3 697 751 165 86 23 chrX 14739792 14739966 -151910330 - Lx2 LINE L1 -1097 4789 4605 3 697 22662 124 17 10 chrX 14739980 14743389 -151906907 - L1_Mus2 LINE L1 -1 6565 3181 3 697 315 0 0 0 chrX 14743389 14743424 -151906872 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 697 22662 140 17 14 chrX 14743424 14744569 -151905727 - L1_Mus2 LINE L1 -2703 3180 1984 3 697 2599 216 68 25 chrX 14744585 14745337 -151904959 - L1_Mus2 LINE L1 -5433 1205 418 3 697 11576 171 29 11 chrX 14745343 14747650 -151902646 - Lx2 LINE L1 -1267 4619 2273 3 697 621 40 0 0 chrX 14747652 14747728 -151902568 + (TTTTC)n Simple_repeat Simple_repeat 3 78 0 3 697 681 142 0 0 chrX 14747730 14747843 -151902453 + (TC)n Simple_repeat Simple_repeat 2 114 0 3 697 7802 155 19 22 chrX 14747843 14748934 -151901362 - Lx3A LINE L1 0 6981 5908 3 697 1070 123 0 11 chrX 14748934 14749115 -151901181 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 3 697 8023 103 36 2 chrX 14749115 14750328 -151899968 - Lx3A LINE L1 -1074 5907 4654 3 697 4141 37 0 2 chrX 14750344 14750837 -151899459 - L1Md_T LINE L1 -2 6580 6089 3 697 585 0 0 0 chrX 14750837 14750904 -151899392 + L1_Mm LINE L1 5393 5459 -424 3 697 251 162 47 59 chrX 14750928 14751013 -151899283 - Lx3A LINE L1 -1225 4661 4578 3 697 6826 112 22 6 chrX 14750980 14752701 -151897595 - L1VL4 LINE L1 -1617 1942 191 3 697 432 0 0 0 chrX 14752752 14752800 -151897496 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 697 1078 223 162 26 chrX 14752898 14753206 -151897090 + MTD LTR MaLR 57 406 -13 3 697 433 129 14 8 chrX 14754178 14754264 -151896032 + L1_Mur1 LINE L1 5117 5202 -684 3 697 272 356 53 53 chrX 14754296 14754465 -151895831 - MLT1D LTR MaLR -301 204 36 3 697 980 298 6 6 chrX 14754499 14754761 -151895535 - Lx8 LINE L1 -987 6709 6457 3 697 457 223 107 0 chrX 14754760 14754863 -151895433 + Lx8 LINE L1 6359 6472 -1001 3 697 696 12 0 0 chrX 14754865 14754946 -151895350 + (CA)n Simple_repeat Simple_repeat 2 82 0 3 697 198 0 0 0 chrX 14754946 14754967 -151895329 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 697 5116 102 24 28 chrX 14755100 14756256 -151894040 + Lx3_Mus LINE L1 5136 6300 -709 3 697 12182 139 17 6 chrX 14756526 14759417 -151890879 - L1_Mus3 LINE L1 0 6638 3715 3 697 369 0 0 0 chrX 14759417 14759458 -151890838 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 697 12182 43 3 53 chrX 14759458 14760490 -151889806 - L1_Mus3 LINE L1 -2163 3720 3563 3 697 26035 143 19 10 chrX 14760491 14765498 -151884798 - L1_Mus2 LINE L1 -44 6964 1515 3 697 1628 91 0 21 chrX 14765498 14765734 -151884562 + L1Md_F2 LINE L1 6348 6578 -4 3 697 26035 193 39 34 chrX 14765734 14766819 -151883477 - L1_Mus2 LINE L1 -4369 1514 418 3 697 22 35 0 0 chrX 14766871 14766900 -151883396 + AT_rich Low_complexity Low_complexity 1 29 0 3 697 390 322 41 0 chrX 14766900 14767021 -151883275 - B3 SINE B2 0 216 91 3 697 198 0 0 0 chrX 14767422 14767444 -151882852 + (TTA)n Simple_repeat Simple_repeat 2 23 0 3 697 334 280 39 20 chrX 14768119 14768221 -151882075 - MLT1A1 LTR MaLR -1 407 304 3 697 1684 102 12 16 chrX 14768549 14768797 -151881499 + RLTR27 LTR ERVK 63 309 0 3 697 4289 78 10 3 chrX 14769115 14769694 -151880602 - L1_Mm LINE L1 -209 5674 5092 3 697 543 31 0 0 chrX 14769707 14769772 -151880524 + (TA)n Simple_repeat Simple_repeat 2 66 0 3 697 4352 30 0 0 chrX 14769820 14770325 -151879971 + L1Md_F2 LINE L1 6070 6574 -8 3 697 1380 260 29 112 chrX 14770377 14770931 -151879365 + RLTR18B LTR ERVK 1 508 -4 3 697 537 312 32 5 chrX 14771037 14771224 -151879072 + B3A SINE B2 1 192 -6 3 697 1358 217 19 13 chrX 14771622 14772015 -151878281 - Lx3C LINE L1 -5 6995 6512 3 697 270 0 0 0 chrX 14772322 14772352 -151877944 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 697 237 192 19 0 chrX 14772354 14772406 -151877890 + (TA)n Simple_repeat Simple_repeat 2 54 0 3 697 414 0 0 0 chrX 14773226 14773272 -151877024 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 3 697 373 225 0 0 chrX 14774136 14774207 -151876089 - 4.5SRNA scRNA scRNA -7 87 17 3 697 1010 239 64 5 chrX 14774207 14774540 -151875756 + Lx5 LINE L1 5749 6091 -1369 3 697 203 125 25 0 chrX 14775065 14775105 -151875191 + (CAA)n Simple_repeat Simple_repeat 2 42 0 3 697 6953 88 3 7 chrX 14775232 14776824 -151873472 - L1Md_F2 LINE L1 -12 6570 4991 3 697 5764 103 27 13 chrX 14776808 14778462 -151871834 + L1Md_F LINE L1 366 2004 -3879 3 697 22186 87 9 3 chrX 14778464 14780905 -151869391 - L1Md_F LINE L1 -1447 4436 1978 3 697 221 0 35 0 chrX 14780905 14780934 -151869362 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 697 22186 149 80 15 chrX 14780934 14782755 -151867541 - L1Md_F LINE L1 -3906 1977 42 3 697 1569 173 21 3 chrX 14782765 14783055 -151867241 - L1VL1 LINE L1 -6077 345 51 3 697 1017 144 0 0 chrX 14783069 14783243 -151867053 + (TTC)n Simple_repeat Simple_repeat 1 174 0 3 697 33 0 0 0 chrX 14783247 14783280 -151867016 + AT_rich Low_complexity Low_complexity 1 33 0 3 697 6309 194 86 120 chrX 14783280 14785270 -151865026 + L1_Mur3 LINE L1 1016 2960 -2920 3 697 7830 56 3 0 chrX 14785270 14786251 -151864045 + L1Md_F3 LINE L1 5587 6570 -14 3 697 6309 191 92 131 chrX 14786251 14786733 -151863563 + L1_Mur3 LINE L1 2961 3396 -2484 3 697 3188 288 53 79 chrX 14786736 14788084 -151862212 + Lx5 LINE L1 5721 7032 -18 3 697 262 278 95 56 chrX 14788925 14789104 -151861192 - RLTR42 LTR ERVK 0 239 54 3 697 250 309 63 31 chrX 14789275 14789402 -151860894 + MLT2C1 LTR ERVL 2 132 -265 3 697 333 218 3 0 chrX 14789330 14789421 -151860875 + MLT1E1A LTR MaLR 81 218 -462 3 697 2794 142 54 0 chrX 14789433 14789878 -151860418 + L1VL2 LINE L1 188 656 -5679 3 697 7960 47 0 12 chrX 14789878 14790923 -151859373 + L1Md_F2 LINE L1 5527 6558 -24 3 697 11957 118 24 3 chrX 14790937 14793088 -151857208 + L1VL2 LINE L1 641 2835 -780 3 697 216 0 0 0 chrX 14793088 14793112 -151857184 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 697 6353 119 5 12 chrX 14793112 14794117 -151856179 + L1_Mm LINE L1 4433 5430 -453 3 697 405 70 0 0 chrX 14794152 14794209 -151856087 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 3 697 642 191 45 15 chrX 14794216 14794349 -151855947 - B1_Mur4 SINE Alu -13 137 1 3 697 24 32 0 0 chrX 14794350 14794381 -151855915 + AT_rich Low_complexity Low_complexity 1 31 0 3 697 255 111 293 12 chrX 14795798 14795880 -151854416 + Lx2B LINE L1 6822 6926 -74 3 697 21 36 0 0 chrX 14795894 14795922 -151854374 + AT_rich Low_complexity Low_complexity 1 28 0 3 697 311 318 0 8 chrX 14796216 14796321 -151853975 + ID4 SINE ID 6 107 -45 3 697 3898 111 20 2 chrX 14796853 14797438 -151852858 + L1_Mm LINE L1 4675 5270 -613 3 697 1437 245 72 81 chrX 14797580 14798050 -151852246 - Lx8 LINE L1 -12 7461 6996 3 697 276 312 74 64 chrX 14798082 14798284 -151852012 - MER90a LTR ERV1 -278 336 133 3 697 388 286 96 15 chrX 14798290 14798425 -151851871 - MER34 LTR ERV1 -24 518 373 3 697 302 333 46 126 chrX 14798553 14798855 -151851441 + RMER10A LTR ERVL 18 295 -147 3 697 546 124 0 0 chrX 14798880 14798969 -151851327 + (CA)n Simple_repeat Simple_repeat 2 90 0 3 697 400 248 49 49 chrX 14799044 14799167 -151851129 + RMER10A LTR ERVL 318 440 -2 3 697 278 324 56 35 chrX 14799167 14799265 -151851031 - MER34 LTR ERV1 -445 126 26 3 697 486 0 0 0 chrX 14799433 14799487 -151850809 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 697 401 301 8 34 chrX 14799510 14799627 -151850669 + PB1D10 SINE Alu 4 117 0 3 697 181 326 0 0 chrX 14799940 14799986 -151850310 - L2 LINE L2 -1156 2263 2218 4 697 299 338 66 0 chrX 14800061 14800197 -151850099 + MLT1D LTR MaLR 53 197 -308 4 697 207 0 0 0 chrX 14800210 14800233 -151850063 + (CAAA)n Simple_repeat Simple_repeat 4 26 0 4 697 804 279 121 26 chrX 14800298 14800604 -151849692 + RMER5 LTR ERV1 195 529 -5 4 697 450 0 0 0 chrX 14800622 14800672 -151849624 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 697 26 50 0 0 chrX 14801229 14801269 -151849027 + AT_rich Low_complexity Low_complexity 1 40 0 4 697 8788 102 0 2 chrX 14801317 14802607 -151847689 + L1_Mm LINE L1 3073 4360 -1523 4 697 2385 56 0 3 chrX 14802607 14802914 -151847382 + L1_Mus1 LINE L1 6247 6552 -15 4 697 261 57 0 0 chrX 14802919 14802954 -151847342 + (CAA)n Simple_repeat Simple_repeat 2 36 0 4 697 1053 103 0 0 chrX 14803054 14803200 -151847096 + B1_Mm SINE Alu 2 147 0 4 697 206 0 0 65 chrX 14803222 14803253 -151847043 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 4 697 510 17 0 0 chrX 14804147 14804206 -151846090 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 4 697 241 405 11 0 chrX 14804206 14804295 -151846001 - PB1D10 SINE Alu -12 105 16 4 697 2426 297 73 31 chrX 14806374 14807252 -151843044 + Lx8 LINE L1 6555 7469 -4 4 697 226 250 119 9 chrX 14808255 14808364 -151841932 - L1MB8 LINE L1 -5 6173 6053 4 697 330 293 0 12 chrX 14808581 14808664 -151841632 + ID4 SINE ID 2 83 0 4 697 390 286 235 30 chrX 14808753 14808987 -151841309 - L1M4 LINE L1 -5634 908 627 4 697 351 304 60 9 chrX 14809047 14809163 -151841133 - ID_B1 SINE B4 -99 125 4 4 697 524 326 99 4 chrX 14809172 14809434 -151840862 - L1M4 LINE L1 -5917 625 339 4 697 4013 99 7 10 chrX 14809564 14810148 -151840148 - L1VL2 LINE L1 -5621 714 133 4 697 345 330 9 26 chrX 14810148 14810263 -151840033 - PB1D10 SINE Alu -4 113 1 4 697 757 278 73 5 chrX 14810275 14810702 -151839594 - L1M4 LINE L1 -2882 3264 2809 4 697 409 291 64 30 chrX 14810708 14811006 -151839290 - L1M4 LINE L1 -3260 2886 2579 4 87 2701 108 16 24 chrX 14811059 14811554 -151838742 + RMER17D2 LTR ERVK 319 809 0 4 698 526 329 19 0 chrX 14811555 14811762 -151838534 - L1M4 LINE L1 -6319 223 13 4 698 21 0 0 0 chrX 14811939 14811960 -151838336 + AT_rich Low_complexity Low_complexity 1 21 0 4 698 5320 142 14 2 chrX 14812314 14813188 -151837108 - Lx2B LINE L1 -324 6676 5793 4 698 1176 229 109 0 chrX 14813195 14813470 -151836826 + Lx2B LINE L1 6686 6990 -10 4 698 459 0 0 0 chrX 14813564 14813615 -151836681 + (TC)n Simple_repeat Simple_repeat 1 51 0 4 698 252 0 0 0 chrX 14813615 14813642 -151836654 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 698 348 312 54 0 chrX 14814076 14814169 -151836127 + ID_B1 SINE B4 83 180 -44 4 698 921 335 85 9 chrX 14814258 14814692 -151835604 - MLT1C LTR MaLR 0 467 1 4 698 241 320 10 10 chrX 14814887 14814991 -151835305 + GA-rich Low_complexity Low_complexity 1 104 0 4 698 534 31 0 0 chrX 14815169 14815233 -151835063 + (TTTC)n Simple_repeat Simple_repeat 2 65 0 4 698 824 315 52 14 chrX 14815253 14815562 -151834734 + LTR16C LTR ERVL 157 568 0 4 698 333 257 22 3 chrX 14815562 14815697 -151834599 + L1M7 LINE L1 1833 1949 -4294 4 698 1084 91 0 12 chrX 14815959 14816126 -151834170 + L1Md_F2 LINE L1 6406 6570 -12 4 698 263 87 14 42 chrX 14816576 14816648 -151833648 + (TTTTG)n Simple_repeat Simple_repeat 3 72 0 4 698 3156 98 65 0 chrX 14816696 14817217 -151833079 + MusHAL1 LINE L1 369 923 -1789 4 698 1105 76 7 0 chrX 14817230 14817374 -151832922 + B1_Mus2 SINE Alu 2 146 -1 4 698 332 303 0 0 chrX 14817532 14817621 -151832675 - PB1D10 SINE Alu -2 115 27 4 698 267 191 73 0 chrX 14818590 14818658 -151831638 + L1M2 LINE L1 2745 2817 -3326 4 698 376 282 122 6 chrX 14818988 14819152 -151831144 + L1MB8 LINE L1 3525 3707 -2439 4 698 300 310 69 0 chrX 14819165 14819281 -151831015 + L1MB8 LINE L1 3671 3794 -2352 4 698 792 305 82 50 chrX 14819363 14819544 -151830752 + L1MB8 LINE L1 3811 3980 -2166 4 698 2287 109 15 9 chrX 14819544 14819886 -151830410 + L1_Mus3 LINE L1 6289 6632 -6 4 698 792 305 82 50 chrX 14819886 14820242 -151830054 + L1MB8 LINE L1 3981 4365 -1781 4 698 2080 334 42 34 chrX 14820259 14820577 -151829719 + Lx7 LINE L1 6228 6536 -1160 4 698 1066 87 0 0 chrX 14820577 14820715 -151829581 + B1_Mm SINE Alu 2 139 -8 4 698 320 18 34 34 chrX 14820715 14820774 -151829522 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 4 698 2080 334 42 34 chrX 14820774 14821318 -151828978 + Lx7 LINE L1 6537 7097 -599 4 698 263 286 82 0 chrX 14821384 14821482 -151828814 + Lx7 LINE L1 7245 7350 -346 4 698 21 36 0 0 chrX 14821611 14821639 -151828657 + AT_rich Low_complexity Low_complexity 1 28 0 4 698 1938 148 73 41 chrX 14821668 14822319 -151827977 + RMER17D2 LTR ERVK 1 809 0 4 698 560 302 19 28 chrX 14822342 14822553 -151827743 - B3 SINE B2 -6 210 2 4 698 617 22 44 0 chrX 14822580 14822671 -151827625 + (TC)n Simple_repeat Simple_repeat 1 95 0 4 698 324 0 0 0 chrX 14822671 14822706 -151827590 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 698 290 350 4 4 chrX 14822724 14822838 -151827458 + B1F1 SINE Alu 1 114 -6 4 698 382 299 5 65 chrX 14822847 14823047 -151827249 + L1MB8 LINE L1 4415 4602 -1544 4 698 339 200 126 53 chrX 14823060 14823155 -151827141 - B1F SINE Alu 0 149 48 4 698 760 271 81 27 chrX 14823157 14823480 -151826816 + L1MB8 LINE L1 4608 4944 -1202 4 698 456 19 0 0 chrX 14823513 14823566 -151826730 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 698 6093 160 45 18 chrX 14823674 14823840 -151826456 + Lx4A LINE L1 5908 6073 -985 4 698 2298 214 204 13 chrX 14823840 14824457 -151825839 - RMER19A LTR ERVK 0 737 3 4 698 6093 160 45 18 chrX 14824457 14825410 -151824886 + Lx4A LINE L1 6074 7058 0 4 698 386 333 75 0 chrX 14825423 14825597 -151824699 + L1MB8 LINE L1 5043 5229 -917 4 698 406 370 76 26 chrX 14825611 14825914 -151824382 + L1MB8 LINE L1 5259 5576 -598 4 698 686 263 125 85 chrX 14825914 14826067 -151824229 + Lx8 LINE L1 7128 7259 -214 4 698 351 0 0 0 chrX 14826067 14826106 -151824190 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 698 686 263 125 85 chrX 14826106 14826280 -151824016 + Lx8 LINE L1 7260 7467 -6 4 698 643 261 35 77 chrX 14826293 14826672 -151823624 + L1MB8 LINE L1 5591 5948 -226 4 698 2181 240 23 140 chrX 14826693 14827152 -151823144 + RMER19C LTR ERVK 1 409 -202 4 698 5625 58 15 0 chrX 14827152 14827883 -151822413 + L1Md_F3 LINE L1 5843 6584 0 4 698 2181 240 23 140 chrX 14827883 14828115 -151822181 + RMER19C LTR ERVK 410 611 0 4 698 390 302 17 11 chrX 14828150 14828324 -151821972 + L1MB8 LINE L1 5997 6171 -13 4 698 182 62 0 30 chrX 14828750 14828783 -151821513 + (TTATA)n Simple_repeat Simple_repeat 5 36 0 4 698 307 189 0 0 chrX 14829381 14829434 -151820862 - PB1D9 SINE Alu -8 112 60 4 698 533 322 46 0 chrX 14829496 14829670 -151820626 + Lx8 LINE L1 6852 7030 -666 4 698 486 0 0 0 chrX 14829670 14829724 -151820572 + (TTATA)n Simple_repeat Simple_repeat 5 58 0 4 698 501 338 98 0 chrX 14829724 14829774 -151820522 + Lx8 LINE L1 7031 7097 -599 4 698 1278 219 28 66 chrX 14830567 14830929 -151819367 - RLTR14 LTR ERV1 -34 348 1 4 698 204 40 0 0 chrX 14831092 14831117 -151819179 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 698 545 134 0 52 chrX 14832018 14832152 -151818144 + G-rich Low_complexity Low_complexity 1 127 0 4 698 1058 80 22 22 chrX 14832152 14832332 -151817964 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 4 698 267 353 0 0 chrX 14832760 14832828 -151817468 - ID4 SINE ID -13 70 3 4 698 372 310 39 0 chrX 14832916 14833045 -151817251 + MIR SINE MIR 32 165 -97 4 698 499 254 183 11 chrX 14833395 14833570 -151816726 - B3 SINE B2 -7 209 5 4 698 21 0 0 0 chrX 14833578 14833599 -151816697 + AT_rich Low_complexity Low_complexity 1 21 0 4 698 285 294 46 75 chrX 14834651 14834681 -151815615 - MLT2B4 LTR ERVL -2 558 528 4 698 372 71 0 0 chrX 14834681 14834737 -151815559 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 698 547 294 75 46 chrX 14834737 14835176 -151815120 - MLT2B4 LTR ERVL -33 527 14 4 698 186 43 0 0 chrX 14835330 14835353 -151814943 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 698 396 0 0 0 chrX 14835745 14835789 -151814507 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 698 1775 50 0 0 chrX 14835792 14836010 -151814286 - L1_Mus1 LINE L1 -9 6558 6341 4 698 2018 213 28 68 chrX 14836155 14836698 -151813598 - Lx7 LINE L1 -3 7693 7173 4 698 770 152 216 0 chrX 14836689 14836860 -151813436 - L1_Mur3 LINE L1 -6728 984 777 4 698 6807 85 60 0 chrX 14836857 14837807 -151812489 + L1_Mus3 LINE L1 5621 6627 -11 4 698 225 0 0 0 chrX 14837809 14837834 -151812462 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 698 2556 206 107 42 chrX 14837854 14838574 -151811722 - L1_Mur3 LINE L1 -6923 789 23 4 698 21 89 0 0 chrX 14838793 14838849 -151811447 + AT_rich Low_complexity Low_complexity 1 56 0 4 698 749 259 55 25 chrX 14838925 14839127 -151811169 - Lx8 LINE L1 -174 7299 7092 4 698 294 27 0 0 chrX 14839127 14839152 -151811144 + (TA)n Simple_repeat Simple_repeat 2 26 0 4 698 375 105 0 0 chrX 14839152 14839209 -151811087 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 698 294 27 0 0 chrX 14839209 14839220 -151811076 + (TA)n Simple_repeat Simple_repeat 1 11 0 4 698 573 115 0 0 chrX 14839455 14839542 -151810754 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 4 698 237 327 0 0 chrX 14840086 14840138 -151810158 + PB1D9 SINE Alu 5 56 -64 4 698 34785 48 7 4 chrX 14840140 14845362 -151804934 + L1Md_T LINE L1 256 5589 -297 4 698 8377 36 0 0 chrX 14845362 14846358 -151803938 + L1Md_T LINE L1 5590 6585 0 4 698 662 237 62 47 chrX 14846743 14847041 -151803255 - L1MA5 LINE L1 -366 5934 5633 4 698 583 285 73 77 chrX 14847366 14847640 -151802656 + MLT1B LTR MaLR 73 345 -45 4 698 348 343 117 12 chrX 14847968 14848139 -151802157 + Tigger7 DNA MER2_type 189 377 -2114 4 698 2151 116 22 0 chrX 14848139 14848459 -151801837 - ORR1A2 LTR MaLR 0 327 1 4 698 228 293 13 13 chrX 14848513 14848589 -151801707 + GA-rich Low_complexity Low_complexity 1 76 0 4 698 442 262 50 118 chrX 14848722 14848943 -151801353 + Tigger7 DNA MER2_type 2283 2488 -3 4 698 181 366 89 8 chrX 14849088 14849212 -151801084 - L2a LINE L2 0 3426 3293 4 698 273 256 147 31 chrX 14849377 14849506 -151800790 + RMER20B LTR ERVK 130 273 -354 4 698 2086 291 73 28 chrX 14849506 14850261 -151800035 + Lx8 LINE L1 6683 7471 -2 4 698 2120 147 31 6 chrX 14850783 14851133 -151799163 - ORR1B2 LTR MaLR -8 359 1 4 698 202 371 32 86 chrX 14851696 14851882 -151798414 + L4 LINE RTE 1460 1635 -394 4 698 234 292 14 14 chrX 14852156 14852229 -151798067 + CT-rich Low_complexity Low_complexity 4 76 0 4 698 243 271 46 59 chrX 14852404 14852557 -151797739 - L1MA10 LINE L1 -5 6329 6179 4 698 325 260 66 37 chrX 14852600 14852736 -151797560 - B1F1 SINE Alu -6 143 4 4 698 909 263 41 6 chrX 14852804 14853118 -151797178 - L1ME1 LINE L1 -216 5963 5639 4 698 1231 259 34 29 chrX 14853112 14853228 -151797068 - L1MEc LINE L1 -3803 2516 2400 5 698 1755 257 17 14 chrX 14853228 14853646 -151796650 + MTD LTR MaLR 1 419 0 5 698 1231 258 35 24 chrX 14853646 14854022 -151796274 - L1MEc LINE L1 -3999 2401 2022 5 698 810 285 93 70 chrX 14854057 14854786 -151795510 - L1MEc LINE L1 -5054 1346 601 5 698 8078 56 1 0 chrX 14854906 14856170 -151794126 - L1Md_F2 LINE L1 0 6582 5318 5 698 13277 91 6 1 chrX 14856177 14858755 -151791541 - L1Md_F2 LINE L1 -2771 3112 523 5 698 862 99 9 9 chrX 14858782 14858911 -151791385 - MT2C_Mm LTR ERVL -55 546 290 5 698 415 324 44 20 chrX 14859073 14859322 -151790974 - L1MEc LINE L1 -6101 299 45 5 698 2253 53 23 29 chrX 14859322 14859631 -151790665 + IAPLTR2b LTR ERVK 1 307 -20 5 698 409 281 10 10 chrX 14859717 14859821 -151790475 + PB1D10 SINE Alu 9 112 -5 5 698 1159 74 0 7 chrX 14860399 14860548 -151789748 + B1_Mus1 SINE Alu 1 148 0 5 698 180 77 0 0 chrX 14860549 14860575 -151789721 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 5 698 327 277 61 26 chrX 14860575 14860690 -151789606 + L1M5 LINE L1 3081 3199 -2947 5 698 22 0 0 0 chrX 14860866 14860888 -151789408 + AT_rich Low_complexity Low_complexity 1 22 0 5 698 219 114 0 0 chrX 14860919 14860954 -151789342 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 698 3672 192 39 51 chrX 14861080 14861860 -151788436 + RMER19B LTR ERVK 1 770 -132 5 698 777 186 0 0 chrX 14861883 14862122 -151788174 + CT-rich Low_complexity Low_complexity 1 239 0 5 698 24 0 0 0 chrX 14862299 14862323 -151787973 + AT_rich Low_complexity Low_complexity 1 24 0 5 698 2783 126 16 11 chrX 14862323 14862774 -151787522 - Lx3B LINE L1 -3 6978 6526 5 698 18627 161 24 74 chrX 14862780 14864987 -151785309 - Lx3B LINE L1 -796 6177 4198 5 698 411 21 0 0 chrX 14864987 14865035 -151785261 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 698 18627 131 16 53 chrX 14865035 14866289 -151784007 - Lx3B LINE L1 -1686 4197 3056 5 698 705 24 0 0 chrX 14866289 14866372 -151783924 + (TTC)n Simple_repeat Simple_repeat 2 84 0 5 698 18627 155 28 44 chrX 14866372 14868974 -151781322 - Lx3B LINE L1 -2828 3055 571 5 698 811 129 0 29 chrX 14868974 14869110 -151781186 - L1_Mur1 LINE L1 -641 5245 5114 5 698 630 163 81 0 chrX 14869110 14869233 -151781063 + RMER19B LTR ERVK 770 902 0 5 698 435 244 81 29 chrX 14869323 14869496 -151780800 - L1MA4 LINE L1 -416 5884 5703 5 698 513 235 0 0 chrX 14869499 14869631 -151780665 + (TATATG)n Simple_repeat Simple_repeat 1 132 0 5 698 405 289 15 31 chrX 14869651 14869847 -151780449 - L1MA4 LINE L1 -649 5654 5462 5 698 346 107 0 0 chrX 14869847 14869903 -151780393 + RLTR11B LTR ERVK 1 56 -397 5 698 8630 3 0 0 chrX 14869961 14870967 -151779329 - L1Md_A LINE L1 0 6582 5627 5 698 759 114 0 0 chrX 14870972 14871086 -151779210 + RLTR11B LTR ERVK 82 195 -258 5 698 333 255 37 19 chrX 14871115 14871223 -151779073 - L1_Mur3 LINE L1 -2001 4139 4004 5 698 929 256 34 27 chrX 14871663 14871960 -151778336 - L1_Mur3 LINE L1 -1881 3999 3701 5 698 1308 229 26 29 chrX 14871966 14872226 -151778070 - RCHARR1 DNA MER1_type -103 871 608 5 698 618 119 39 8 chrX 14872226 14872353 -151777943 + L1_Mus3 LINE L1 6502 6632 -6 5 698 1308 229 26 29 chrX 14872353 14872443 -151777853 - RCHARR1 DNA MER1_type -367 607 522 5 698 214 208 56 0 chrX 14872622 14872694 -151777602 + (TA)n Simple_repeat Simple_repeat 1 76 0 5 698 782 272 59 6 chrX 14872727 14873011 -151777285 - L1MA4A LINE L1 -396 5907 5576 5 698 323 250 0 42 chrX 14873023 14873094 -151777202 - B3A SINE B2 -130 68 1 5 698 248 133 89 0 chrX 14873190 14873235 -151777061 - L1P5 LINE L1 -691 5465 5417 5 698 253 416 8 0 chrX 14873319 14873444 -151776852 + Lx8 LINE L1 7088 7213 -260 5 698 543 265 48 30 chrX 14874149 14874382 -151775914 - L1_Rod LINE L1 -586 5300 5024 5 698 6457 154 82 35 chrX 14874373 14875631 -151774665 + Lx4A LINE L1 5739 7055 -3 5 698 1038 241 119 42 chrX 14875683 14876254 -151774042 - L1MA4A LINE L1 -1109 5034 4420 5 698 651 298 105 42 chrX 14876688 14877308 -151772988 - L1MA4A LINE L1 -2549 3594 2936 5 698 625 258 23 0 chrX 14877334 14877462 -151772834 + B3A SINE B2 3 133 -65 5 698 1607 138 124 0 chrX 14877464 14877755 -151772541 + IAPEY3_LTR LTR ERVK 1 327 -5 5 698 287 222 34 90 chrX 14877759 14877848 -151772448 + B3 SINE B2 132 215 -1 5 698 2413 74 159 3 chrX 14877960 14878145 -151772151 + BGLII_Mus LTR ERVK 1 190 -232 5 698 369 0 0 0 chrX 14878145 14878186 -151772110 + (GA)n Simple_repeat Simple_repeat 1 41 0 5 698 563 0 0 15 chrX 14878188 14878256 -151772040 + (GGA)n Simple_repeat Simple_repeat 3 69 0 5 698 2413 74 159 3 chrX 14878256 14878432 -151771864 + BGLII_Mus LTR ERVK 191 414 -8 5 698 447 222 192 44 chrX 14880289 14880492 -151769804 + Lx9 LINE L1 7393 7625 -19 5 698 231 230 103 0 chrX 14880671 14880758 -151769538 + L1ME2 LINE L1 6062 6157 -7 5 698 491 288 8 0 chrX 14881023 14881148 -151769148 + B1F SINE Alu 24 149 0 5 698 21 82 0 0 chrX 14881148 14881197 -151769099 + AT_rich Low_complexity Low_complexity 1 49 0 5 698 605 294 79 14 chrX 14881200 14881414 -151768882 - MIR SINE MIR -34 228 1 5 698 3907 128 15 0 chrX 14882332 14882919 -151767377 + L1VL4 LINE L1 195 790 -5512 5 698 20603 182 29 50 chrX 14882914 14884505 -151765791 + Lx LINE L1 1321 2869 -3014 5 698 1091 109 0 0 chrX 14884505 14884652 -151765644 + B1_Mm SINE Alu 1 147 0 5 698 20603 182 29 50 chrX 14884652 14885350 -151764946 + Lx LINE L1 2870 3482 -2401 5 698 266 0 29 0 chrX 14885350 14885384 -151764912 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 5 698 20603 171 29 34 chrX 14885384 14888497 -151761799 + Lx LINE L1 3483 6651 -3 5 698 714 12 0 0 chrX 14890189 14890272 -151760024 + (GTTTG)n Simple_repeat Simple_repeat 2 84 0 5 698 714 53 0 11 chrX 14890272 14890357 -151759939 - B1_Mus2 SINE Alu -9 138 54 5 698 250 266 111 25 chrX 14890306 14890387 -151759909 - RLTR25B LTR ERVK -519 509 422 5 698 1142 238 90 90 chrX 14890420 14890987 -151759309 - RMER2 LTR ERV1 0 567 1 5 698 463 341 11 22 chrX 14891061 14891241 -151759055 - MER58A DNA MER1_type -1 223 46 5 698 1014 307 78 53 chrX 14891915 14892311 -151757985 - MTD LTR MaLR 0 419 14 5 698 210 118 0 0 chrX 14892358 14892392 -151757904 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 5 698 22 0 0 0 chrX 14892860 14892882 -151757414 + AT_rich Low_complexity Low_complexity 1 22 0 5 698 6611 119 34 14 chrX 14892882 14894089 -151756207 + Lx LINE L1 5424 6654 0 5 698 542 130 0 0 chrX 14894221 14894321 -151755975 - Lx LINE L1 0 6654 6555 5 698 904 215 92 5 chrX 14894321 14894527 -151755769 + RLTR19 LTR ERVK 276 499 0 5 698 684 223 116 154 chrX 14894530 14894696 -151755600 - RLTR21 LTR ERVK -266 1306 1128 5 698 252 0 0 0 chrX 14894696 14894724 -151755572 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 698 684 223 116 154 chrX 14894724 14894875 -151755421 - RLTR21 LTR ERVK -445 1127 1001 5 698 925 285 31 25 chrX 14894875 14895195 -151755101 + Lx8 LINE L1 6758 7079 -394 5 698 229 200 39 20 chrX 14895196 14895247 -151755049 - Charlie5 DNA MER1_type -1698 926 875 5 698 644 294 53 6 chrX 14895247 14895418 -151754878 + Lx8 LINE L1 7158 7336 -137 5 698 318 396 30 12 chrX 14895574 14895750 -151754546 - L2b LINE L2 -240 3186 3000 5 698 295 330 19 76 chrX 14895939 14896044 -151754252 - B1F1 SINE Alu -43 106 8 5 698 551 272 70 75 chrX 14896253 14896440 -151753856 + RMER30 DNA MER1_type 17 202 0 5 698 484 307 102 52 chrX 14896482 14896705 -151753591 - ORR1E LTR MaLR -150 224 1 5 698 1091 82 7 0 chrX 14897114 14897260 -151753036 + B1_Mus1 SINE Alu 2 148 0 5 698 510 272 60 26 chrX 14897329 14897480 -151752816 + B3A SINE B2 1 156 -42 5 698 609 61 0 0 chrX 14897480 14897562 -151752734 + (TG)n Simple_repeat Simple_repeat 1 82 0 5 698 504 380 33 33 chrX 14897704 14897986 -151752310 + LTR86B1 LTR ERVL 95 390 -103 5 698 262 311 68 0 chrX 14898210 14898284 -151752012 + B3 SINE B2 26 104 -112 5 698 1498 280 34 18 chrX 14898275 14898660 -151751636 - MTD LTR MaLR -16 403 13 5 698 1343 110 22 14 chrX 14898860 14899082 -151751214 - RMER17D2 LTR ERVK 0 809 586 5 698 3019 126 4 10 chrX 14899082 14899564 -151750732 - RMER17A-int LTR ERVK -477 1251 773 5 698 613 271 57 35 chrX 14899851 14899953 -151750343 - RMER17A-int LTR ERVK -1492 236 135 5 698 522 0 0 0 chrX 14899953 14900011 -151750285 + (GA)n Simple_repeat Simple_repeat 1 58 0 5 698 613 271 57 35 chrX 14900011 14900137 -151750159 - RMER17A-int LTR ERVK -1594 134 4 5 698 4078 104 174 1 chrX 14900139 14900829 -151749467 - RMER17D2 LTR ERVK 0 809 1 5 698 243 0 0 0 chrX 14900899 14900926 -151749370 + (A)n Simple_repeat Simple_repeat 1 27 0 5 698 323 324 46 0 chrX 14900995 14901103 -151749193 - MER20 DNA MER1_type -57 162 50 5 698 24 32 0 0 chrX 14901333 14901364 -151748932 + AT_rich Low_complexity Low_complexity 1 31 0 5 698 502 325 94 28 chrX 14901480 14901692 -151748604 + B4A SINE B4 5 230 -62 5 698 825 271 14 9 chrX 14901695 14901907 -151748389 + B3 SINE B2 4 216 0 5 698 459 0 0 0 chrX 14901966 14902017 -151748279 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 698 19778 173 18 11 chrX 14902623 14907249 -151743047 - Lx LINE L1 -12 6642 1985 5 698 13122 65 9 1 chrX 14907234 14908948 -151741348 + L1Md_F2 LINE L1 3859 5586 -297 5 698 7846 60 1 2 chrX 14908948 14909945 -151740351 + L1Md_F2 LINE L1 5587 6582 0 5 698 231 327 41 66 chrX 14910443 14910564 -151739732 + L2b LINE L2 3235 3352 -23 5 698 222 355 24 32 chrX 14910847 14910972 -151739324 + B1F SINE Alu 21 144 -5 5 698 339 105 0 0 chrX 14911114 14911171 -151739125 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 698 970 293 26 11 chrX 14911174 14911440 -151738856 - B4 SINE B4 -18 274 5 5 698 1113 208 65 4 chrX 14911470 14911702 -151738594 - Lx3C LINE L1 -2 6974 6729 5 698 968 181 0 0 chrX 14911736 14911902 -151738394 - URR1B DNA MER1_type 0 225 60 5 698 426 69 0 0 chrX 14911933 14911991 -151738305 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 698 229 247 116 63 chrX 14912300 14912395 -151737901 + MLT1N2 LTR MaLR 461 560 -2 5 698 504 257 22 14 chrX 14912512 14912650 -151737646 + B1F SINE Alu 1 139 -10 5 698 297 325 0 42 chrX 14915136 14915255 -151735041 + MLT1A0 LTR MaLR 10 123 -242 5 698 259 348 0 28 chrX 14915286 14915357 -151734939 - RMER30 DNA MER1_type -9 193 125 5 698 278 265 94 38 chrX 14915877 14915918 -151734378 - RLTR43B LTR ERVK 0 375 332 5 698 324 0 0 0 chrX 14915918 14915954 -151734342 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 698 278 270 114 35 chrX 14915954 14916051 -151734245 - RLTR43B LTR ERVK -44 331 210 5 698 239 133 83 0 chrX 14916790 14916850 -151733446 + MER2 DNA MER2_type 116 180 -165 5 698 464 316 28 37 chrX 14916880 14917094 -151733202 + MER2 DNA MER2_type 121 332 -13 5 698 324 0 0 0 chrX 14917235 14917271 -151733025 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 698 312 27 0 0 chrX 14917272 14917309 -151732987 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 5 698 2717 150 79 2 chrX 14917309 14917778 -151732518 - Lx3B LINE L1 -11 6962 6458 5 698 306 295 86 37 chrX 14918373 14918535 -151731761 + HAL1 LINE L1 851 1020 -1487 5 698 334 272 20 11 chrX 14918574 14918679 -151731617 - B1F SINE Alu -7 113 2 5 698 31489 102 6 11 chrX 14918722 14924924 -151725372 + L1_Mus1 LINE L1 397 6566 -1 6 698 42 57 0 0 chrX 14925455 14925525 -151724771 + AT_rich Low_complexity Low_complexity 1 70 0 6 698 208 303 52 60 chrX 14925967 14926083 -151724213 - MIR SINE MIR -37 225 111 6 698 4047 197 85 4 chrX 14926201 14927114 -151723182 - Lx9 LINE L1 -4 7640 6654 6 698 249 291 176 17 chrX 14927295 14927414 -151722882 - LTR16A1 LTR ERVL 0 456 319 6 698 20035 120 18 5 chrX 14927873 14929226 -151721070 - L1_Mus3 LINE L1 -8 6630 5131 6 698 5344 118 8 0 chrX 14929226 14930021 -151720275 - L1_Mus1 LINE L1 -2 6565 5765 6 698 20532 159 17 15 chrX 14930021 14932049 -151718247 - L1_Mus3 LINE L1 -756 5127 3130 6 698 1002 80 0 0 chrX 14932049 14932186 -151718110 + (CATATA)n Simple_repeat Simple_repeat 2 138 0 6 698 20532 164 31 17 chrX 14932186 14934833 -151715463 - L1_Mus3 LINE L1 -2754 3129 406 6 698 971 275 47 60 chrX 14935404 14935526 -151714770 - RLTR14 LTR ERV1 -12 370 245 6 698 423 38 0 0 chrX 14935526 14935579 -151714717 + (CA)n Simple_repeat Simple_repeat 1 53 0 6 698 971 275 47 60 chrX 14935579 14935820 -151714476 - RLTR14 LTR ERV1 -138 244 12 6 698 706 276 64 35 chrX 14936819 14937022 -151713274 + B3A SINE B2 8 216 0 6 698 1772 237 45 25 chrX 14937610 14938013 -151712283 + MTD LTR MaLR 1 411 -8 6 698 493 305 78 19 chrX 14938338 14938492 -151711804 + RSINE1 SINE B4 2 164 -1 6 698 390 42 0 0 chrX 14938809 14938857 -151711439 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 698 240 306 12 70 chrX 14939299 14939471 -151710825 - Lx7 LINE L1 -19 7677 7516 6 698 1417 288 26 38 chrX 14939509 14940011 -151710285 + Lx7 LINE L1 6826 7321 -375 6 698 1018 283 36 43 chrX 14940415 14940832 -151709464 - BGLII_B LTR ERVK -27 414 1 6 698 394 190 0 0 chrX 14940879 14940958 -151709338 + L1_Mus1 LINE L1 6483 6561 -6 6 698 288 0 0 0 chrX 14940958 14940990 -151709306 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 698 484 266 81 34 chrX 14940991 14941139 -151709157 - Lx8 LINE L1 -248 7225 7071 6 698 305 136 0 92 chrX 14941155 14941220 -151709076 + MER57-int LTR ERV1 7181 7239 -298 6 698 888 61 0 0 chrX 14941405 14941520 -151708776 + (CA)n Simple_repeat Simple_repeat 1 115 0 6 698 210 171 24 0 chrX 14941528 14941569 -151708727 + GA-rich Low_complexity Low_complexity 1 42 0 6 698 315 177 0 0 chrX 14942106 14942168 -151708128 + (TTG)n Simple_repeat Simple_repeat 2 63 0 6 699 225 94 0 0 chrX 14942772 14942804 -151707492 + (T)n Simple_repeat Simple_repeat 1 32 0 6 699 21 0 0 0 chrX 14943603 14943624 -151706672 + AT_rich Low_complexity Low_complexity 1 21 0 6 699 229 284 30 0 chrX 14943945 14944012 -151706284 - MIR SINE MIR -106 156 88 6 699 392 331 304 7 chrX 14945005 14945285 -151705011 + MLT1D LTR MaLR 10 372 -133 6 699 288 287 58 2 chrX 14945534 14945629 -151704667 + PB1D9 SINE Alu 10 109 -11 6 699 243 357 169 36 chrX 14945775 14946135 -151704161 - L2a LINE L2 -88 3338 2931 6 699 7358 65 2 1 chrX 14946172 14947167 -151703129 - L1Md_F2 LINE L1 0 6582 5587 6 699 26405 90 3 7 chrX 14947188 14951704 -151698592 - L1Md_F2 LINE L1 -758 5125 218 6 699 368 313 147 58 chrX 14951710 14952022 -151698274 - L2a LINE L2 -534 2885 2546 6 699 304 303 161 38 chrX 14952026 14952287 -151698009 - L2a LINE L2 -985 2434 2142 6 699 180 0 0 0 chrX 14952975 14952995 -151697301 + (ATGTG)n Simple_repeat Simple_repeat 3 22 0 6 699 27 0 0 0 chrX 14953425 14953452 -151696844 + AT_rich Low_complexity Low_complexity 1 27 0 6 699 2203 134 12 12 chrX 14953902 14954248 -151696048 + RMER17B LTR ERVK 1 346 -612 6 699 1921 135 15 24 chrX 14954256 14954597 -151695699 - L1Md_T LINE L1 -1 6581 6244 6 699 554 90 0 0 chrX 14954608 14954686 -151695610 + L1_Mus1 LINE L1 6095 6172 -395 6 699 3589 150 38 8 chrX 14954686 14955318 -151694978 + RMER17B LTR ERVK 308 958 0 6 699 529 369 75 30 chrX 14955508 14955936 -151694360 + L2a LINE L2 2968 3414 -12 6 699 279 130 0 0 chrX 14956430 14956484 -151693812 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 699 579 224 119 0 chrX 14956542 14956676 -151693620 - RMER1C Other Other -630 712 563 6 699 2357 243 42 60 chrX 14956668 14957277 -151693019 + RMER1C Other Other 602 1208 -134 6 699 1245 96 0 0 chrX 14957277 14957455 -151692841 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 6 699 2357 243 42 60 chrX 14957455 14957599 -151692697 + RMER1C Other Other 1209 1342 0 6 699 393 22 0 0 chrX 14957697 14957743 -151692553 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 699 971 247 58 39 chrX 14958143 14958621 -151691675 + L1VL2 LINE L1 9 396 -5939 6 699 237 220 33 17 chrX 14958860 14958920 -151691376 + PB1D10 SINE Alu 52 112 -5 6 699 227 301 117 11 chrX 14959342 14959436 -151690860 - MLT1H LTR MaLR -313 236 133 6 699 304 293 36 24 chrX 14961251 14961335 -151688961 - RSINE1 SINE B4 -23 142 58 6 699 559 273 179 5 chrX 14961468 14961652 -151688644 + B3 SINE B2 1 216 0 6 699 31587 92 18 6 chrX 14961766 14968033 -151682263 - L1Md_F2 LINE L1 -2 6580 244 6 699 447 318 7 29 chrX 14968193 14968329 -151681967 - RSINE1 SINE B4 -22 143 11 6 699 280 346 20 0 chrX 14968725 14968826 -151681470 + PB1D7 SINE Alu 2 104 -16 6 699 207 139 0 0 chrX 14968831 14968867 -151681429 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 6 699 467 263 8 0 chrX 14969322 14969440 -151680856 + Lx8 LINE L1 6633 6751 -722 6 699 503 218 129 0 chrX 14969530 14969654 -151680642 + B1_Mus2 SINE Alu 8 147 0 6 699 5105 37 0 2 chrX 14969751 14970350 -151679946 - L1_Mus1 LINE L1 0 6567 5970 6 699 375 83 0 0 chrX 14970390 14970450 -151679846 + (T)n Simple_repeat Simple_repeat 1 60 0 6 699 37388 72 1 22 chrX 14970452 14977979 -151672317 - L1Md_T LINE L1 0 6582 99 6 699 327 348 186 32 chrX 14978300 14978579 -151671717 - L1MEg LINE L1 -5537 547 226 6 699 577 270 92 0 chrX 14978900 14979085 -151671211 - MLT1C LTR MaLR -3 464 263 6 699 306 0 0 0 chrX 14979085 14979119 -151671177 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 699 3709 32 0 2 chrX 14979125 14979591 -151670705 - L1Md_F2 LINE L1 -22 6560 6096 6 699 445 307 173 4 chrX 14979591 14979817 -151670479 - MLT1C LTR MaLR -193 274 11 6 699 520 354 56 59 chrX 14980234 14980558 -151669738 + MLT1A LTR MaLR 23 345 -29 6 699 438 255 49 0 chrX 14980765 14980867 -151669429 - ID_B1 SINE B4 0 224 118 6 699 265 24 48 0 chrX 14981140 14981182 -151669114 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 6 699 19081 165 22 93 chrX 14981191 14983107 -151667189 - L1_Mus2 LINE L1 0 6566 4665 6 699 2762 102 0 14 chrX 14983107 14983525 -151666771 - BGLII LTR ERVK 0 421 10 6 699 19081 165 22 93 chrX 14983525 14987011 -151663285 - L1_Mus2 LINE L1 0 4664 1203 6 699 372 22 0 0 chrX 14987011 14987056 -151663240 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 699 4835 161 58 13 chrX 14987056 14987888 -151662408 - L1_Mus2 LINE L1 -5455 1202 358 6 699 1249 258 77 8 chrX 14988400 14988790 -151661506 + MTD LTR MaLR 1 417 -2 6 699 234 0 0 0 chrX 14990050 14990076 -151660220 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 6 699 249 310 32 70 chrX 14990144 14990300 -151659996 + MLT1A1 LTR MaLR 2 151 -257 6 699 250 290 32 21 chrX 14990660 14990755 -151659541 - MTEa LTR MaLR 0 379 284 6 699 492 117 0 0 chrX 14991476 14991553 -151658743 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 6 699 211 255 0 0 chrX 14992346 14992397 -151657899 + GA-rich Low_complexity Low_complexity 3 53 0 6 699 264 264 56 19 chrX 14992397 14992505 -151657791 + MERVL_2A-int LTR ERVL 4509 4620 -1137 6 699 279 232 42 28 chrX 14992610 14992681 -151657615 + MLT1A1 LTR MaLR 1 72 -336 6 699 1557 47 0 0 chrX 14992698 14992890 -151657406 - MTA_Mm LTR MaLR 0 396 205 6 699 1859 9 0 0 chrX 14992912 14993125 -151657171 - MT2_Mm LTR ERVL 0 493 281 6 699 284 349 23 0 chrX 14993356 14993488 -151656808 + MERVL_2A-int LTR ERVL 4683 4817 -850 6 699 309 344 40 27 chrX 14994138 14994362 -151655934 + MERVL_2A-int LTR ERVL 5216 5442 -319 6 699 258 313 43 29 chrX 14994587 14994725 -151655571 + B1F1 SINE Alu 1 140 -9 6 699 863 306 33 72 chrX 14994782 14994815 -151655481 - MLT2D LTR ERVL -65 349 318 6 699 693 296 91 18 chrX 14994815 14995155 -151655141 - MLT1A0 LTR MaLR 0 365 1 6 699 863 306 33 72 chrX 14995155 14995484 -151654812 - MLT2D LTR ERVL -97 317 1 6 699 4698 75 0 0 chrX 14996694 14997324 -151652972 - L1Md_F2 LINE L1 -305 6277 5648 6 699 1779 118 40 20 chrX 14997324 14997626 -151652670 + L1Md_F2 LINE L1 6275 6582 0 6 699 426 298 62 25 chrX 14997630 14997915 -151652381 + L1M5 LINE L1 5133 5428 -696 6 699 971 310 79 15 chrX 14997916 14998359 -151651937 + L1MEc LINE L1 36 501 -5899 6 699 4433 8 0 16 chrX 14998359 14998860 -151651436 + MT2_Mm LTR ERVL 1 493 0 6 699 971 310 79 15 chrX 14998860 14999008 -151651288 + L1MEc LINE L1 502 665 -5735 6 699 306 0 0 0 chrX 14999555 14999589 -151650707 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 6 699 1162 113 0 0 chrX 14999776 14999962 -151650334 - L1_Mus2 LINE L1 0 6566 6381 6 699 329 0 0 0 chrX 14999962 15000000 -151650296 + MTA_Mm LTR MaLR 1 38 -358 6 699 2984 25 3 0 chrX 15000000 15000357 -151649939 + MTA_Mm LTR MaLR 39 396 0 1 699 1395 69 49 5 chrX 15000357 15000560 -151649736 - L1_Mus2 LINE L1 -181 6385 6174 2 699 1391 198 39 7 chrX 15000687 15000971 -151649325 - RMER19A LTR ERVK 0 737 401 3 699 7516 99 10 12 chrX 15000971 15002936 -151647360 + L1_Mus2 LINE L1 4712 6628 -8 4 699 1076 159 6 0 chrX 15002936 15003106 -151647190 - RMER19A LTR ERVK -566 171 1 5 699 435 251 44 5 chrX 15003277 15003412 -151646884 - B3 SINE B2 -56 142 1 6 699 418 300 200 0 chrX 15003420 15003570 -151646726 - B3A SINE B2 -18 180 1 7 699 231 214 0 0 chrX 15003854 15003910 -151646386 + A-rich Low_complexity Low_complexity 1 56 0 8 699 793 288 145 21 chrX 15003977 15004794 -151645502 + L1ME2 LINE L1 4991 5897 -267 9 699 285 128 0 0 chrX 15004812 15004859 -151645437 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 699 229 323 73 30 chrX 15005105 15005338 -151644958 + L1ME2 LINE L1 5878 6120 -59 9 699 953 301 80 3 chrX 15005667 15006004 -151644292 - MLT1A0 LTR MaLR 0 365 3 1 699 961 300 20 80 chrX 15006487 15006515 -151643781 + MTD LTR MaLR 1 23 -384 1 699 372 77 0 0 chrX 15006515 15006567 -151643729 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 699 1598 216 16 18 chrX 15006567 15006889 -151643407 + MTD LTR MaLR 24 341 -78 1 699 368 244 23 0 chrX 15006981 15007067 -151643229 + MTD LTR MaLR 332 419 -2 1 699 331 324 91 28 chrX 15007163 15007364 -151642932 - MTEb LTR MaLR 0 379 165 1 699 336 336 93 0 chrX 15007584 15007691 -151642605 + PB1 SINE Alu 7 123 -4 1 699 2065 211 80 70 chrX 15007847 15008387 -151641909 + RMER15 LTR ERVL 29 573 -2 1 699 379 179 25 37 chrX 15008660 15008741 -151641555 - MER34A LTR ERV1 -491 80 1 1 699 6667 113 4 14 chrX 15009273 15010020 -151640276 + L1VL2 LINE L1 12 758 -5577 1 699 1435 54 27 0 chrX 15010020 15010205 -151640091 + B2_Mm1t SINE B2 4 193 0 1 699 9058 102 30 12 chrX 15010205 15011915 -151638381 + L1VL2 LINE L1 759 2489 -1126 1 699 198 0 0 0 chrX 15011915 15011937 -151638359 + (T)n Simple_repeat Simple_repeat 1 22 0 2 699 319 194 81 0 chrX 15012065 15012127 -151638169 + MER34A LTR ERV1 1 67 -504 2 699 431 345 94 35 chrX 15012139 15012479 -151637817 + MER34A LTR ERV1 187 546 -25 2 699 23 0 0 0 chrX 15012838 15012861 -151637435 + AT_rich Low_complexity Low_complexity 1 23 0 2 699 3729 101 5 23 chrX 15012861 15013427 -151636869 - L1Md_F2 LINE L1 0 6582 6027 2 699 3017 51 0 0 chrX 15013427 15013781 -151636515 + IAPEY2_LTR LTR ERVK 1 354 -3 2 699 4279 167 35 6 chrX 15013787 15015060 -151635236 - L1VL2 LINE L1 -1743 1872 559 2 699 507 33 0 0 chrX 15015364 15015425 -151634871 + (TTTC)n Simple_repeat Simple_repeat 2 62 0 2 699 32248 70 3 9 chrX 15015447 15019040 -151631256 - L1Md_F3 LINE L1 0 6584 3008 2 699 1012 129 0 0 chrX 15019040 15019187 -151631109 - B1_Mm SINE Alu 0 147 1 2 699 32248 92 2 18 chrX 15019187 15021633 -151628663 - L1Md_F3 LINE L1 -2876 3007 397 2 699 233 300 0 0 chrX 15023445 15023495 -151626801 + ID4_ SINE ID 34 83 0 2 699 4546 50 0 14 chrX 15023933 15024504 -151625792 - L1Md_F2 LINE L1 0 6582 6020 3 699 1274 26 0 0 chrX 15024504 15024660 -151625636 + L1Md_F2 LINE L1 5865 6020 -562 3 699 22 56 0 0 chrX 15024768 15024804 -151625492 + AT_rich Low_complexity Low_complexity 1 36 0 3 699 374 360 102 0 chrX 15024925 15025111 -151625185 - B3 SINE B2 -11 205 1 3 699 617 10 9 56 chrX 15025315 15025423 -151624873 + (GAGAA)n Simple_repeat Simple_repeat 2 104 0 3 699 499 331 68 0 chrX 15025467 15025615 -151624681 - RSINE1 SINE B4 -5 160 3 3 699 564 162 0 0 chrX 15025923 15026028 -151624268 + (CATA)n Simple_repeat Simple_repeat 3 107 0 3 699 241 248 9 9 chrX 15026008 15026122 -151624174 + (TATATG)n Simple_repeat Simple_repeat 4 117 0 3 699 885 246 14 51 chrX 15026852 15027066 -151623230 + B3 SINE B2 6 211 -5 3 699 588 125 0 0 chrX 15027871 15027967 -151622329 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 3 699 396 0 0 0 chrX 15028227 15028271 -151622025 + (T)n Simple_repeat Simple_repeat 1 44 0 3 699 1494 205 110 36 chrX 15028353 15028743 -151621553 + MTD LTR MaLR 1 419 0 4 699 563 197 200 11 chrX 15028743 15028928 -151621368 + MTD-int LTR MaLR 1 220 -1038 4 699 351 44 0 0 chrX 15029649 15029694 -151620602 + (TTG)n Simple_repeat Simple_repeat 1 45 0 4 699 515 282 43 52 chrX 15030195 15030427 -151619869 + RLTR40 LTR ERVK 287 516 -301 4 699 508 30 0 0 chrX 15030437 15030503 -151619793 - L1_Mus2 LINE L1 0 6566 6501 4 699 1925 47 12 0 chrX 15030505 15030760 -151619536 + L1_Mus2 LINE L1 5856 6113 -453 4 699 512 268 60 52 chrX 15030765 15031013 -151619283 + RLTR40 LTR ERVK 521 770 -47 4 699 325 276 48 0 chrX 15031633 15031738 -151618558 + L1MC LINE L1 4237 4346 -1800 4 699 512 250 87 93 chrX 15032056 15032206 -151618090 - B1F2 SINE Alu 0 149 1 4 699 388 278 86 16 chrX 15032206 15032451 -151617845 - L1MD2 LINE L1 -41 6318 6057 4 699 284 329 33 24 chrX 15032695 15032907 -151617389 + L1MD LINE L1 4140 4353 -1793 4 699 1146 235 22 48 chrX 15032916 15033184 -151617112 + MTD LTR MaLR 3 263 -156 4 699 255 211 0 17 chrX 15033203 15033261 -151617035 - B1_Mur4 SINE Alu -5 145 89 5 699 308 178 408 0 chrX 15033274 15033377 -151616919 + MTD LTR MaLR 272 416 -3 4 699 424 247 100 26 chrX 15033421 15033691 -151616605 + L1MD LINE L1 4411 4700 -1446 4 699 201 39 0 0 chrX 15033979 15034005 -151616291 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 5 699 405 0 0 0 chrX 15034071 15034116 -151616180 + (TATG)n Simple_repeat Simple_repeat 4 48 0 5 699 293 299 26 0 chrX 15034117 15034194 -151616102 - B3 SINE B2 -21 195 117 5 699 314 350 43 11 chrX 15034350 15034535 -151615761 - L1MDb LINE L1 -6139 270 80 5 699 813 291 143 16 chrX 15034672 15034979 -151615317 + ORR1D2 LTR MaLR 25 370 0 5 699 411 288 100 22 chrX 15035093 15035324 -151614972 + L1MD3 LINE L1 7577 7825 -170 5 699 21 0 0 0 chrX 15036203 15036224 -151614072 + AT_rich Low_complexity Low_complexity 1 21 0 5 699 359 194 76 125 chrX 15037365 15037430 -151612866 + Lx9 LINE L1 7355 7425 -219 5 699 447 68 0 0 chrX 15037430 15037489 -151612807 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 699 359 194 76 125 chrX 15037489 15037647 -151612649 + Lx9 LINE L1 7426 7566 -78 5 699 198 0 0 0 chrX 15037751 15037773 -151612523 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 6 699 28 29 0 0 chrX 15038191 15038226 -151612070 + AT_rich Low_complexity Low_complexity 1 35 0 6 699 25773 90 96 1 chrX 15038696 15044381 -151605915 - L1Md_F2 LINE L1 -11 6571 311 6 699 300 27 0 0 chrX 15044747 15044784 -151605512 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 699 1816 150 77 6 chrX 15045204 15045540 -151604756 - Lx2 LINE L1 -1 6996 6637 6 699 6259 180 18 13 chrX 15045541 15047205 -151603091 + Lx2B LINE L1 4654 6342 -658 6 699 423 0 0 0 chrX 15047340 15047387 -151602909 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 699 364 365 30 108 chrX 15047606 15047941 -151602355 + ORR1E LTR MaLR 1 309 -50 6 699 389 356 96 53 chrX 15048012 15048522 -151601774 - HAL1 LINE L1 -302 2205 1674 6 699 828 254 58 48 chrX 15048523 15048668 -151601628 - L1MA6 LINE L1 -2 6298 6150 6 699 6512 51 14 0 chrX 15048668 15049465 -151600831 - RLTR13C2 LTR ERVK 0 808 1 7 699 828 254 58 48 chrX 15049465 15049712 -151600584 - L1MA6 LINE L1 -151 6149 5902 6 699 1656 304 69 0 chrX 15050510 15051060 -151599236 + Lx8 LINE L1 6230 6817 -656 7 699 5554 47 65 0 chrX 15051173 15051870 -151598426 + RLTR4_Mm LTR ERV1 1 742 0 7 699 46432 10 2 0 chrX 15051870 15059457 -151590839 + RLTR4_MM-int LTR ERV1 1 7601 0 7 699 5554 47 65 0 chrX 15059457 15060154 -151590142 + RLTR4_Mm LTR ERV1 1 742 0 7 699 265 307 59 0 chrX 15060168 15060269 -151590027 + Lx8 LINE L1 6969 7075 -398 7 699 220 220 20 0 chrX 15060703 15060753 -151589543 + CT-rich Low_complexity Low_complexity 1 51 0 7 699 2048 147 0 3 chrX 15060840 15061168 -151589128 + ORR1A2 LTR MaLR 1 327 0 7 699 301 200 13 67 chrX 15061175 15061250 -151589046 - HAL1-3A_ME LINE L1 -506 2352 2282 7 699 496 233 145 39 chrX 15061553 15061732 -151588564 + B3A SINE B2 1 198 0 7 699 315 381 59 43 chrX 15061886 15062278 -151588018 + L1M5 LINE L1 4567 4964 -1182 7 699 369 0 0 0 chrX 15062421 15062462 -151587834 + (A)n Simple_repeat Simple_repeat 1 41 0 7 699 24 32 0 0 chrX 15062506 15062537 -151587759 + AT_rich Low_complexity Low_complexity 1 31 0 7 699 897 74 0 0 chrX 15063366 15063488 -151586808 + (GA)n Simple_repeat Simple_repeat 2 123 0 8 699 370 268 11 113 chrX 15063490 15063667 -151586629 - RSINE1 SINE B4 -2 163 5 8 699 4423 145 28 35 chrX 15064028 15064954 -151585342 + L1Md_T LINE L1 286 1205 -5411 8 699 34569 34 0 0 chrX 15064960 15069376 -151580920 + L1Md_T LINE L1 1170 5585 -298 8 699 7975 55 1 0 chrX 15069377 15070371 -151579925 + L1Md_T LINE L1 5587 6581 -1 8 699 22 0 0 0 chrX 15070409 15070431 -151579865 + AT_rich Low_complexity Low_complexity 1 22 0 8 699 1526 283 172 17 chrX 15070436 15071069 -151579227 - Lx6 LINE L1 -27 7433 6703 8 699 23 54 0 0 chrX 15071079 15071116 -151579180 + AT_rich Low_complexity Low_complexity 1 37 0 8 699 207 0 0 0 chrX 15071232 15071255 -151579041 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 8 699 2215 157 63 5 chrX 15071260 15071658 -151578638 + MTC LTR MaLR 1 421 0 8 699 180 0 0 0 chrX 15071683 15071703 -151578593 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 8 699 245 290 30 10 chrX 15071708 15071809 -151578487 - Lx7 LINE L1 -388 7308 7206 8 699 581 105 11 0 chrX 15071877 15071972 -151578324 + (TC)n Simple_repeat Simple_repeat 1 96 0 9 699 2413 240 67 9 chrX 15071986 15072646 -151577650 - Lx6 LINE L1 -179 7281 6584 9 699 301 181 27 14 chrX 15072711 15072784 -151577512 - RLTR45-int LTR ERVK -2 7404 7331 9 87 2476 195 85 90 chrX 15073002 15074555 -151575741 - RLTR45-int LTR ERVK -1812 5432 2898 9 700 7870 93 13 11 chrX 15074555 15074738 -151575558 - L1_Mur1 LINE L1 -507 5379 5195 9 700 306 0 0 0 chrX 15074738 15074772 -151575524 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 9 700 7870 93 13 11 chrX 15074772 15075326 -151574970 - L1_Mur1 LINE L1 -692 5194 4648 9 700 266 50 25 0 chrX 15075326 15075366 -151574930 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 9 700 7870 93 13 11 chrX 15075366 15075893 -151574403 - L1_Mur1 LINE L1 -1239 4647 4114 9 700 1317 77 10 0 chrX 15075891 15076085 -151574211 + L1_Mur1 LINE L1 2469 2664 -3222 9 700 2771 234 88 33 chrX 15076086 15076959 -151573337 - L1_Mur3 LINE L1 -6530 1182 262 9 700 368 325 51 13 chrX 15077005 15077161 -151573135 - B3 SINE B2 -4 212 51 9 700 992 297 95 19 chrX 15077312 15077724 -151572572 - Lx8 LINE L1 -277 7196 6754 9 700 232 277 15 15 chrX 15077804 15077870 -151572426 + ID4_ SINE ID 5 70 -13 1 700 196 316 133 0 chrX 15078627 15078725 -151571571 - MIRc SINE MIR -53 215 105 1 700 540 111 0 0 chrX 15079211 15079292 -151571004 + (TTA)n Simple_repeat Simple_repeat 1 81 0 1 700 425 406 36 32 chrX 15079332 15079551 -151570745 - MLT1G3 LTR MaLR -193 402 183 1 700 23 0 0 0 chrX 15079648 15079671 -151570625 + AT_rich Low_complexity Low_complexity 1 23 0 1 700 33838 73 3 7 chrX 15079736 15085909 -151564387 - L1Md_F3 LINE L1 -14 6570 446 1 700 228 342 25 59 chrX 15086177 15086295 -151564001 - MLT1G3 LTR MaLR -195 400 287 1 700 2378 163 23 0 chrX 15086411 15086923 -151563373 - Lx5 LINE L1 -1006 6044 5516 1 700 4247 221 36 18 chrX 15086924 15087914 -151562382 + Lx5 LINE L1 6042 7049 -1 1 700 2223 192 15 10 chrX 15088431 15088842 -151561454 - MTC LTR MaLR -8 413 1 1 700 1893 201 41 23 chrX 15088842 15089280 -151561016 - MTC-int LTR MaLR 0 1258 813 1 700 876 78 21 0 chrX 15089283 15089425 -151560871 - L1_Mus3 LINE L1 0 6638 6494 1 700 4525 97 6 0 chrX 15089425 15090076 -151560220 + L1_Mus3 LINE L1 5841 6495 -141 1 700 1930 219 107 55 chrX 15090076 15090701 -151559595 - MTC-int LTR MaLR -357 741 74 1 700 3125 108 73 2 chrX 15090732 15091214 -151559082 + Lx3_Mus LINE L1 6486 7001 -8 1 700 2694 35 28 0 chrX 15091235 15091553 -151558743 + IAPLTR2b LTR ERVK 1 327 0 1 700 317 62 0 20 chrX 15091670 15091719 -151558577 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 700 252 0 0 0 chrX 15092095 15092123 -151558173 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 1 700 242 363 29 10 chrX 15092123 15092226 -151558070 + MER77 LTR ERVL 393 497 -110 1 700 289 204 0 123 chrX 15092693 15092799 -151557497 + ORR1C2 LTR MaLR 1 93 -291 1 700 850 213 6 123 chrX 15092796 15092853 -151557443 - RMER17C LTR ERVK -131 279 235 1 700 387 0 0 0 chrX 15092853 15092896 -151557400 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 700 850 213 6 123 chrX 15092896 15093154 -151557142 - RMER17C LTR ERVK -176 234 1 1 700 450 324 29 0 chrX 15093415 15093551 -151556745 - B1_Mur1 SINE Alu -9 140 1 1 700 416 214 112 37 chrX 15093572 15093679 -151556617 + RMER17C LTR ERVK 296 410 0 1 700 752 108 17 0 chrX 15094444 15094564 -151555732 + (GAAA)n Simple_repeat Simple_repeat 3 124 0 1 700 900 232 81 51 chrX 15094775 15095048 -151555248 + RMER13A LTR ERVK 99 379 -481 1 700 702 35 0 0 chrX 15095992 15096077 -151554219 + (TATATG)n Simple_repeat Simple_repeat 4 88 0 1 700 310 319 54 11 chrX 15096103 15096195 -151554101 + PB1D10 SINE Alu 1 96 -21 1 700 356 130 14 0 chrX 15096391 15096460 -151553836 + (CA)n Simple_repeat Simple_repeat 2 71 0 1 700 25 31 0 0 chrX 15096553 15096585 -151553711 + AT_rich Low_complexity Low_complexity 1 32 0 1 700 21 36 0 0 chrX 15096957 15096985 -151553311 + AT_rich Low_complexity Low_complexity 1 28 0 1 700 527 351 0 0 chrX 15097107 15097241 -151553055 - B3 SINE B2 -82 134 1 1 700 723 279 94 5 chrX 15097621 15097812 -151552484 + ID_B1 SINE B4 6 213 -11 1 700 183 100 0 0 chrX 15097816 15097846 -151552450 + (CAA)n Simple_repeat Simple_repeat 1 30 0 1 700 1054 291 33 20 chrX 15099169 15099565 -151550731 + Lx8 LINE L1 6659 7059 -414 1 700 314 342 8 0 chrX 15100564 15100681 -151549615 - MER94 DNA AcHobo -16 118 1 1 700 629 193 111 47 chrX 15100729 15100919 -151549377 + RMER10A LTR ERVL 241 442 0 1 700 382 316 30 6 chrX 15101055 15101224 -151549072 + Lx9 LINE L1 7226 7398 -246 1 700 363 373 13 13 chrX 15101302 15101454 -151548842 + B4A SINE B4 1 152 -140 1 700 21 82 0 0 chrX 15101497 15101546 -151548750 + AT_rich Low_complexity Low_complexity 1 49 0 1 700 1621 241 157 57 chrX 15102026 15102799 -151547497 - L1MC3 LINE L1 -20 7765 6916 1 700 4352 195 40 9 chrX 15102876 15103788 -151546508 - Lx5 LINE L1 -348 6702 5763 1 700 1364 244 8 50 chrX 15103787 15104149 -151546147 + Lx4B LINE L1 6706 7052 -6 1 700 387 0 0 0 chrX 15104210 15104253 -151546043 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 700 1027 311 81 24 chrX 15104255 15104810 -151545486 - Lx6 LINE L1 -21 7439 6484 1 700 2052 236 52 9 chrX 15104834 15105553 -151544743 - Lx6 LINE L1 -705 6353 5546 1 700 454 328 67 91 chrX 15105554 15105750 -151544546 - ORR1B1 LTR MaLR -3 364 173 1 700 516 72 0 0 chrX 15105750 15105819 -151544477 + (TA)n Simple_repeat Simple_repeat 1 69 0 1 700 547 255 29 54 chrX 15105819 15105995 -151544301 - ORR1B1 LTR MaLR -195 172 1 1 700 374 162 0 0 chrX 15106068 15106136 -151544160 - L1_Mus1 LINE L1 -224 6342 6275 1 700 27110 147 29 12 chrX 15106134 15111715 -151538581 - L1_Mus1 LINE L1 -616 5951 265 1 700 5988 108 7 4 chrX 15111888 15112875 -151537421 + Lx3_Mus LINE L1 5021 5980 -1029 1 700 4624 90 8 14 chrX 15113094 15113771 -151536525 - L1_Mus3 LINE L1 0 6638 5989 1 700 649 335 63 29 chrX 15114493 15114984 -151535312 - L1ME3A LINE L1 -237 5936 5429 1 700 388 323 94 31 chrX 15115101 15115357 -151534939 - L1ME3A LINE L1 -3242 2904 2633 1 700 6912 110 28 1 chrX 15116077 15116981 -151533315 - L1_Mus3 LINE L1 -2 6636 5712 1 700 303 28 0 0 chrX 15116981 15117017 -151533279 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1 700 6912 108 13 1 chrX 15117017 15117724 -151532572 - L1_Mus3 LINE L1 -172 5711 4995 1 700 284 0 28 0 chrX 15117724 15117760 -151532536 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 700 243 0 0 0 chrX 15117881 15117908 -151532388 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 700 384 97 0 0 chrX 15118483 15118545 -151531751 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 700 335 293 20 55 chrX 15118552 15118751 -151531545 - L1M5 LINE L1 -776 5370 5179 1 700 979 118 0 53 chrX 15118929 15119081 -151531215 + B1_Mus1 SINE Alu 1 144 -4 1 700 203 231 0 0 chrX 15119396 15119435 -151530861 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 700 298 368 107 11 chrX 15119435 15119696 -151530600 + LTR86A1 LTR ERVL 149 434 -79 1 700 2032 171 17 67 chrX 15119935 15120341 -151529955 - ORR1B1 LTR MaLR -8 386 1 1 700 503 181 0 11 chrX 15120541 15120636 -151529660 + ORR1D-int LTR MaLR 231 324 -1046 1 700 1476 244 17 120 chrX 15120629 15121139 -151529157 + ORR1D-int LTR MaLR 544 1128 -381 1 700 378 0 0 0 chrX 15121139 15121181 -151529115 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 700 342 0 0 0 chrX 15121181 15121218 -151529078 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 700 1321 241 11 141 chrX 15121218 15121282 -151529014 + ORR1D-int LTR MaLR 1129 1190 -319 1 700 258 244 48 24 chrX 15121278 15121362 -151528934 + MTC LTR MaLR 336 421 0 1 700 216 24 48 24 chrX 15121871 15121913 -151528383 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 700 467 12 0 131 chrX 15122060 15122352 -151527944 + (TTTTTG)n Simple_repeat Simple_repeat 1 253 0 1 700 21 57 0 0 chrX 15122797 15122832 -151527464 + AT_rich Low_complexity Low_complexity 1 35 0 1 700 248 161 68 51 chrX 15123119 15123178 -151527118 + LTR48 LTR ERV1 3 62 -725 1 700 250 325 12 12 chrX 15123250 15123355 -151526941 + CT-rich Low_complexity Low_complexity 1 105 0 1 700 345 313 48 24 chrX 15123501 15123668 -151526628 + LTR48 LTR ERV1 479 649 -138 1 700 26 30 0 0 chrX 15124022 15124055 -151526241 + AT_rich Low_complexity Low_complexity 1 33 0 1 700 858 171 0 7 chrX 15124367 15124514 -151525782 + B1_Mur4 SINE Alu 2 147 -3 1 700 189 0 0 0 chrX 15124519 15124540 -151525756 + (A)n Simple_repeat Simple_repeat 1 21 0 1 700 32181 87 4 6 chrX 15124569 15129699 -151520597 + L1Md_F3 LINE L1 441 5558 -325 1 700 7105 85 9 4 chrX 15129713 15130706 -151519590 + L1Md_F3 LINE L1 5587 6584 0 1 700 4618 63 0 29 chrX 15130707 15131330 -151518966 + L1Md_F2 LINE L1 5963 6567 -15 1 700 471 35 0 0 chrX 15131330 15131387 -151518909 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 700 5539 69 16 0 chrX 15131405 15132326 -151517970 + L1Md_F2 LINE L1 5092 6032 -550 1 700 2855 67 0 0 chrX 15132326 15132683 -151517613 - IAPEY2_LTR LTR ERVK 0 357 1 1 700 2782 76 62 0 chrX 15132683 15133339 -151516957 - IAPEy-int LTR ERVK 0 7680 6984 1 700 185 377 44 0 chrX 15133339 15133453 -151516843 - L3b LINE CR1 -29 453 335 1 700 3343 87 9 0 chrX 15133468 15133916 -151516380 - IAPEy-int LTR ERVK -4991 2689 2238 1 700 7984 170 7 28 chrX 15133893 15135387 -151514909 - IAPEy-int LTR ERVK -5501 2012 550 1 700 750 210 0 37 chrX 15135381 15135544 -151514752 - IAPEy-int LTR ERVK -7356 157 1 1 700 2949 48 0 3 chrX 15135549 15135904 -151514392 - IAPEY2_LTR LTR ERVK -3 354 1 1 700 18091 182 21 20 chrX 15135905 15139597 -151510699 + Lx2A LINE L1 2173 5871 -15 1 700 207 0 0 0 chrX 15139597 15139620 -151510676 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 700 18091 132 53 77 chrX 15139620 15140796 -151509500 + Lx2A LINE L1 5869 7007 -1 1 700 803 319 63 32 chrX 15141030 15141443 -151508853 - MLT2B1 LTR ERVL -40 522 1 1 700 308 374 41 68 chrX 15141443 15141664 -151508632 - LTR16C LTR ERVL -192 297 83 1 700 2855 178 41 0 chrX 15141967 15142474 -151507822 - Lx2 LINE L1 -415 6582 6055 1 700 1034 86 0 7 chrX 15143227 15143367 -151506929 + B1_Mus2 SINE Alu 5 143 -4 1 700 598 47 23 0 chrX 15143369 15143455 -151506841 + (GAAA)n Simple_repeat Simple_repeat 2 89 0 1 700 3581 169 62 32 chrX 15143557 15144480 -151505816 - RLTR25A LTR ERVK 0 1028 28 1 700 555 341 58 13 chrX 15145372 15145684 -151504612 + Lx8 LINE L1 6946 7271 -202 1 700 633 313 62 110 chrX 15145697 15146315 -151503981 - L1ME3A LINE L1 -83 6090 5503 1 700 5467 158 144 3 chrX 15146980 15148018 -151502278 - Lx2 LINE L1 0 6997 5813 1 700 6542 140 21 3 chrX 15148424 15149658 -151500638 + Lx LINE L1 5398 6652 -2 1 700 348 227 22 11 chrX 15150770 15150859 -151499437 + MTE2a LTR MaLR 290 379 0 1 700 823 313 89 40 chrX 15151059 15151362 -151498934 + ORR1E LTR MaLR 1 318 -41 1 700 711 88 0 10 chrX 15151364 15151471 -151498825 - Lx3A LINE L1 -1027 5954 5850 1 700 6327 132 15 11 chrX 15151471 15152484 -151497812 + Lx3A LINE L1 5950 6966 -15 1 700 765 85 0 0 chrX 15152484 15152590 -151497706 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 1 700 6327 132 15 11 chrX 15152590 15152604 -151497692 + Lx3A LINE L1 6967 6980 -1 1 700 257 284 9 64 chrX 15152604 15152625 -151497671 - Lx3A LINE L1 -733 5849 5831 1 700 22 35 0 0 chrX 15153555 15153584 -151496712 + AT_rich Low_complexity Low_complexity 1 29 0 1 700 240 294 24 0 chrX 15153945 15154030 -151496266 - L1MC5 LINE L1 -562 7399 7313 1 700 28 0 0 0 chrX 15154350 15154378 -151495918 + AT_rich Low_complexity Low_complexity 1 28 0 1 700 766 308 40 0 chrX 15154381 15154579 -151495717 + B3 SINE B2 2 207 -9 1 700 382 232 8 46 chrX 15154638 15154769 -151495527 - Lx9 LINE L1 -127 7517 7392 1 700 228 67 0 0 chrX 15154776 15154806 -151495490 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 700 1021 311 90 8 chrX 15154813 15155202 -151495094 - Lx9 LINE L1 -973 6671 6251 1 700 241 281 12 24 chrX 15155203 15155287 -151495009 + (TATATG)n Simple_repeat Simple_repeat 4 86 0 1 700 436 310 26 6 chrX 15155376 15155532 -151494764 - Lx9 LINE L1 -1712 5932 5774 1 700 485 140 0 10 chrX 15155664 15155765 -151494531 + Lx2 LINE L1 6897 6996 -1 1 700 306 0 0 0 chrX 15156251 15156285 -151494011 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 700 594 0 0 0 chrX 15156428 15156494 -151493802 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 700 500 111 0 12 chrX 15156494 15156576 -151493720 + (GAA)n Simple_repeat Simple_repeat 3 83 0 2 700 992 54 17 35 chrX 15156576 15156749 -151493547 + (GGAGA)n Simple_repeat Simple_repeat 5 174 0 2 700 222 280 0 0 chrX 15157007 15157057 -151493239 + CT-rich Low_complexity Low_complexity 1 50 0 2 700 584 270 124 34 chrX 15157190 15157537 -151492759 + MTD LTR MaLR 1 411 -8 2 700 770 291 88 51 chrX 15157550 15157923 -151492373 + RMER5 LTR ERV1 148 534 0 2 700 2902 70 25 8 chrX 15158658 15159058 -151491238 + L1Md_F2 LINE L1 6174 6580 -2 2 700 1131 211 29 36 chrX 15159079 15159355 -151490941 + RLTR46 LTR ERVK 42 315 -5 2 700 31 26 0 0 chrX 15160535 15160573 -151489723 + AT_rich Low_complexity Low_complexity 1 38 0 2 700 281 290 84 110 chrX 15161071 15161226 -151489070 + RSINE1 SINE B4 11 161 -4 2 700 528 111 0 0 chrX 15161383 15161464 -151488832 + (TA)n Simple_repeat Simple_repeat 2 82 0 2 700 31 44 0 0 chrX 15161600 15161645 -151488651 + AT_rich Low_complexity Low_complexity 1 45 0 2 700 4917 127 95 8 chrX 15161888 15162722 -151487574 + RMER17A2 LTR ERVK 1 906 0 2 700 2441 92 79 0 chrX 15163269 15163638 -151486658 + L1_Mus1 LINE L1 6169 6566 -1 2 700 2013 132 6 26 chrX 15163725 15164068 -151486228 + RLTR31A_Mm LTR ERVK 1 336 -248 2 700 30395 5 2 1 chrX 15164097 15170832 -151479464 - L1Md_A LINE L1 0 6582 1 2 700 254 139 0 104 chrX 15170856 15170904 -151479392 + RLTR31A_Mm LTR ERVK 542 584 0 2 700 3887 245 33 32 chrX 15171089 15172015 -151478281 + L1_Mur3 LINE L1 176 1116 -6596 2 700 769 162 55 27 chrX 15172015 15172161 -151478135 + B1_Mur4 SINE Alu 1 150 0 2 700 3887 245 33 32 chrX 15172161 15172252 -151478044 + L1_Mur3 LINE L1 1117 1194 -6518 2 700 5223 161 46 13 chrX 15172225 15173152 -151477144 + Lx2 LINE L1 6014 6971 -26 2 700 427 100 0 0 chrX 15173156 15173216 -151477080 - Lx2 LINE L1 -145 6852 6793 2 700 3122 267 36 15 chrX 15173224 15174073 -151476223 + Lx7 LINE L1 6476 7342 -354 2 700 22 0 0 0 chrX 15174125 15174147 -151476149 + AT_rich Low_complexity Low_complexity 1 22 0 2 700 1086 224 40 68 chrX 15174174 15174500 -151475796 + Lx7 LINE L1 7378 7694 -2 2 700 24 53 0 0 chrX 15174774 15174812 -151475484 + AT_rich Low_complexity Low_complexity 1 38 0 2 700 510 254 15 15 chrX 15175000 15175159 -151475137 - L1M4 LINE L1 -484 5695 5530 2 700 409 45 30 0 chrX 15175341 15175407 -151474889 - L1_Mus3 LINE L1 -7 6631 6564 2 700 2431 168 68 13 chrX 15175415 15175874 -151474422 - LTRIS4 LTR ERV1 0 507 24 2 700 2837 117 0 9 chrX 15175925 15176349 -151473947 + L1_Mus4 LINE L1 6173 6592 -44 2 700 287 328 0 0 chrX 15176348 15176461 -151473835 + L1MC5 LINE L1 6698 6865 -1017 2 700 1259 273 23 8 chrX 15177777 15178128 -151472168 + Lx7 LINE L1 6915 7270 -426 2 700 234 203 30 103 chrX 15178134 15178171 -151472125 + T-rich Low_complexity Low_complexity 116 154 0 2 700 1252 64 0 0 chrX 15178171 15178342 -151471954 + L1Md_A LINE L1 6412 6582 0 2 700 234 203 30 103 chrX 15178342 15178422 -151471874 + T-rich Low_complexity Low_complexity 45 115 0 2 700 1169 61 7 0 chrX 15178422 15178569 -151471727 - B1_Mus1 SINE Alu 0 148 1 2 700 234 203 30 103 chrX 15178569 15178615 -151471681 + T-rich Low_complexity Low_complexity 2 44 0 2 700 1290 161 219 20 chrX 15179105 15179256 -151471040 - RMER17C LTR ERVK 0 410 212 2 700 417 39 0 0 chrX 15179256 15179307 -151470989 + (GA)n Simple_repeat Simple_repeat 1 51 0 2 700 1290 161 219 20 chrX 15179307 15179497 -151470799 - RMER17C LTR ERVK -199 211 2 2 700 3108 129 110 14 chrX 15179497 15179851 -151470445 - RMER17C-int LTR ERVK 0 3238 2882 2 700 330 115 0 0 chrX 15179851 15179903 -151470393 + (CATA)n Simple_repeat Simple_repeat 1 52 0 2 700 3108 129 110 14 chrX 15179903 15180121 -151470175 - RMER17C-int LTR ERVK -357 2881 2611 2 700 240 244 0 0 chrX 15180127 15180172 -151470124 + LSU-rRNA_Hsa rRNA rRNA 4202 4246 -789 2 700 446 75 90 0 chrX 15180172 15180239 -151470057 - RMER17C-int LTR ERVK -699 2539 2467 2 700 5407 112 34 1 chrX 15180240 15181038 -151469258 - L1Md_F2 LINE L1 -12 6570 5747 2 700 11949 78 2 7 chrX 15181038 15181864 -151468432 + L1_Mm LINE L1 4116 4940 -943 2 700 3710 77 32 0 chrX 15181864 15182360 -151467936 + RLTR1B LTR ERV1 1 512 0 2 700 11949 78 2 7 chrX 15182360 15183166 -151467130 + L1_Mm LINE L1 4941 5739 -144 2 700 272 146 0 0 chrX 15183167 15183215 -151467081 - RMER17C-int LTR ERVK -762 2476 2429 2 700 1547 175 105 32 chrX 15183216 15183617 -151466679 - RMER17C-int LTR ERVK -733 2505 2076 2 700 2018 149 126 14 chrX 15183618 15184108 -151466188 + RLTR13D4 LTR ERVK 1 640 -383 2 700 403 153 47 12 chrX 15184108 15184194 -151466102 - RMER17C-int LTR ERVK -1741 1497 1409 2 700 987 144 0 13 chrX 15185091 15185246 -151465050 - RMER17C LTR ERVK 0 410 258 2 700 1678 139 0 8 chrX 15185246 15185499 -151464797 + RMER17C-int LTR ERVK 2980 3230 -8 2 700 1800 153 44 51 chrX 15185507 15185920 -151464376 + RMER17C LTR ERVK 1 410 0 2 700 918 119 28 0 chrX 15187089 15187232 -151463064 + B1_Mus1 SINE Alu 1 147 -1 2 700 513 94 0 0 chrX 15187232 15187317 -151462979 + (CAAAC)n Simple_repeat Simple_repeat 5 89 0 2 700 639 317 0 53 chrX 15187382 15187552 -151462744 + RSINE1 SINE B4 3 163 -2 2 700 473 295 47 69 chrX 15187684 15187917 -151462379 + L1M5 LINE L1 5400 5627 -537 2 700 928 231 10 5 chrX 15187950 15188154 -151462142 - B3 SINE B2 -10 206 2 2 700 772 305 128 33 chrX 15188318 15188949 -151461347 + L1MA8 LINE L1 4671 5361 -782 2 700 318 350 0 57 chrX 15188951 15189075 -151461221 + B1F1 SINE Alu 1 117 -32 2 700 241 405 0 0 chrX 15189121 15189195 -151461101 + ID4 SINE ID 6 79 -4 2 700 392 0 21 0 chrX 15189255 15189303 -151460993 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 2 700 1170 122 22 0 chrX 15189326 15189506 -151460790 + B2_Mm2 SINE B2 3 186 -9 2 700 366 313 9 0 chrX 15189518 15189633 -151460663 + PB1D10 SINE Alu 1 116 -1 2 700 4684 77 0 13 chrX 15189638 15190323 -151459973 + L1Md_F2 LINE L1 5953 6582 0 2 700 1160 247 73 25 chrX 15190406 15190763 -151459533 + ORR1D1 LTR MaLR 1 374 0 2 700 1311 283 77 47 chrX 15190774 15191081 -151459215 + L1MA8 LINE L1 5476 5786 -505 2 700 324 0 0 0 chrX 15191081 15191117 -151459179 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 700 1311 283 77 47 chrX 15191117 15191292 -151459004 + L1MA8 LINE L1 5787 5974 -317 2 700 1773 187 98 23 chrX 15191292 15191680 -151458616 - MTC LTR MaLR 0 421 5 2 700 1311 283 77 47 chrX 15191680 15191963 -151458333 + L1MA8 LINE L1 5975 6265 -26 2 700 24 0 0 0 chrX 15192532 15192556 -151457740 + AT_rich Low_complexity Low_complexity 1 24 0 2 700 261 0 0 0 chrX 15192608 15192637 -151457659 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 700 989 124 0 0 chrX 15192637 15192774 -151457522 - B1_Mur4 SINE Alu -9 141 5 2 700 344 318 45 0 chrX 15192806 15192916 -151457380 - PB1D10 SINE Alu 0 117 3 2 700 328 207 48 36 chrX 15192928 15193020 -151457276 - B1_Mur1 SINE Alu 0 149 57 2 700 200 218 0 52 chrX 15193573 15193631 -151456665 + CT-rich Low_complexity Low_complexity 2 56 0 2 700 364 240 38 94 chrX 15194949 15195055 -151455241 - PB1D9 SINE Alu -20 100 1 2 700 26 0 0 0 chrX 15195353 15195379 -151454917 + AT_rich Low_complexity Low_complexity 1 26 0 2 700 278 299 46 124 chrX 15195611 15195764 -151454532 - B3 SINE B2 -14 202 47 2 700 776 244 39 50 chrX 15195767 15196047 -151454249 + L1_Mur2 LINE L1 451 727 -5985 2 700 1132 236 103 6 chrX 15196335 15196676 -151453620 - Lx9 LINE L1 -7 7637 7264 2 700 21 0 0 0 chrX 15196835 15196856 -151453440 + AT_rich Low_complexity Low_complexity 1 21 0 2 700 437 114 0 12 chrX 15197036 15197116 -151453180 - L1Md_F2 LINE L1 -10 6572 6494 2 700 21470 135 26 7 chrX 15197119 15202569 -151447727 - L1Md_F2 LINE L1 -560 6022 339 2 700 23 0 0 53 chrX 15202748 15202765 -151447531 + AT_rich Low_complexity Low_complexity 1 16 0 2 700 1166 88 0 0 chrX 15202765 15202912 -151447384 + B1_Mm SINE Alu 1 147 0 2 700 23 0 0 53 chrX 15202912 15202932 -151447364 + AT_rich Low_complexity Low_complexity 1 20 0 2 700 1204 112 22 0 chrX 15202932 15203110 -151447186 - B2_Mm2 SINE B2 -13 182 1 2 700 23 0 0 0 chrX 15203873 15203896 -151446400 + AT_rich Low_complexity Low_complexity 1 23 0 2 701 23 33 0 0 chrX 15204416 15204446 -151445850 + AT_rich Low_complexity Low_complexity 1 30 0 2 701 426 94 0 0 chrX 15204516 15204580 -151445716 + (GA)n Simple_repeat Simple_repeat 2 65 0 2 701 392 77 15 0 chrX 15204879 15204944 -151445352 + (TATG)n Simple_repeat Simple_repeat 1 66 0 2 701 973 103 18 55 chrX 15205494 15205659 -151444637 - Lx2A1 LINE L1 -1226 5782 5624 2 701 590 125 0 0 chrX 15205656 15205744 -151444552 + Lx2 LINE L1 5754 5841 -1156 2 701 7332 128 129 3 chrX 15205745 15207018 -151443278 + L1_Mm LINE L1 4406 5838 -45 2 701 1444 103 0 0 chrX 15207053 15207247 -151443049 - Lx2A1 LINE L1 -226 5657 5464 2 701 4331 94 77 53 chrX 15207248 15207965 -151442331 + L1_Mus2 LINE L1 5833 6566 0 2 701 1597 199 72 27 chrX 15207966 15208553 -151441743 + Lx2 LINE L1 5834 6480 -501 2 701 329 252 21 84 chrX 15208564 15208707 -151441589 + L1M4 LINE L1 5 138 -6404 2 701 580 39 0 49 chrX 15208706 15208788 -151441508 + Lx3_Mus LINE L1 6812 6889 -120 2 701 3307 124 60 65 chrX 15208788 15209415 -151440881 - RLTR13D6 LTR ERVK 0 958 288 2 701 692 311 66 33 chrX 15209578 15209973 -151440323 + L1M4 LINE L1 557 964 -5578 2 701 549 229 184 32 chrX 15210041 15210226 -151440070 - B3 SINE B2 -3 213 1 2 701 384 296 101 0 chrX 15210306 15210563 -151439733 + L1M4 LINE L1 3639 3921 -2723 2 701 284 267 117 19 chrX 15210709 15210812 -151439484 + PB1D10 SINE Alu 5 117 0 2 701 675 242 0 0 chrX 15211104 15211232 -151439064 + B2_Mm2 SINE B2 2 129 -66 2 701 966 83 0 0 chrX 15211252 15211385 -151438911 + (TA)n Simple_repeat Simple_repeat 1 133 0 2 701 321 244 11 0 chrX 15211407 15211497 -151438799 + L1M4 LINE L1 4794 4884 -1760 2 701 277 294 46 35 chrX 15212653 15212773 -151437523 - MLT1A0 LTR MaLR -45 422 259 2 701 364 295 123 8 chrX 15212819 15212949 -151437347 - MLT1A0 LTR MaLR -218 147 3 2 701 241 312 0 30 chrX 15213112 15213178 -151437118 - MLT1I LTR MaLR -1 410 347 2 701 787 148 125 52 chrX 15213478 15213670 -151436626 + MTD LTR MaLR 214 419 0 2 701 448 248 41 34 chrX 15213763 15213909 -151436387 + Lx7 LINE L1 7070 7216 -480 2 701 246 325 126 11 chrX 15214025 15214112 -151436184 + B1F1 SINE Alu 2 98 -51 2 701 526 366 101 72 chrX 15215300 15216026 -151434270 + MER21B LTR ERV1 3 749 -114 2 701 186 209 0 0 chrX 15216211 15216254 -151434042 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 2 701 333 387 125 14 chrX 15216276 15216420 -151433876 - RSINE1 SINE B4 -2 163 4 2 701 3417 23 5 0 chrX 15216787 15217181 -151433115 - MTA_Mm LTR MaLR 0 396 1 3 701 198 0 0 0 chrX 15217382 15217404 -151432892 + (GGAAA)n Simple_repeat Simple_repeat 5 26 0 3 701 511 94 0 86 chrX 15217405 15217544 -151432752 + G-rich Low_complexity Low_complexity 6 132 0 3 701 313 354 20 0 chrX 15217544 15217643 -151432653 + polypurine Low_complexity Low_complexity 2 102 0 3 701 250 250 37 24 chrX 15217643 15217807 -151432489 + A-rich Low_complexity Low_complexity 1 166 0 3 701 347 312 81 34 chrX 15217849 15217998 -151432298 + HAL1-3A_ME LINE L1 2284 2439 -419 3 701 794 219 15 11 chrX 15218002 15218266 -151432030 + A-rich Low_complexity Low_complexity 1 265 0 3 701 1056 213 106 53 chrX 15218342 15218625 -151431671 - MTD LTR MaLR -49 370 73 3 701 192 97 0 0 chrX 15218625 15218656 -151431640 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 701 2457 183 72 8 chrX 15218683 15219180 -151431116 - Lx5 LINE L1 -3 7047 6519 3 701 279 311 0 62 chrX 15219180 15219276 -151431020 - MTD LTR MaLR -327 92 3 3 701 225 154 104 30 chrX 15219276 15219337 -151430959 + B1F1 SINE Alu 83 148 -1 3 701 638 62 10 0 chrX 15219945 15220041 -151430255 + (TC)n Simple_repeat Simple_repeat 2 98 0 3 701 258 32 0 0 chrX 15220041 15220071 -151430225 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 701 259 352 31 23 chrX 15221262 15221390 -151428906 - MLT1A1 LTR MaLR -12 396 268 3 701 477 0 0 0 chrX 15221762 15221815 -151428481 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 701 1107 203 66 38 chrX 15221815 15222133 -151428163 + Lx9 LINE L1 7317 7643 -1 3 701 732 304 98 25 chrX 15222334 15222783 -151427513 + L1MC4 LINE L1 293 774 -5441 3 701 504 0 0 0 chrX 15222816 15222872 -151427424 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 701 297 0 0 0 chrX 15222872 15222904 -151427392 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 701 22 35 0 0 chrX 15222946 15222975 -151427321 + AT_rich Low_complexity Low_complexity 1 29 0 3 701 268 60 19 39 chrX 15223018 15223070 -151427226 + (CAAAAA)n Simple_repeat Simple_repeat 4 54 0 3 701 593 280 128 74 chrX 15223734 15224085 -151426211 - ORR1D2 LTR MaLR 0 370 1 3 701 1041 108 0 29 chrX 15224103 15224275 -151426021 + L1Md_F2 LINE L1 6405 6571 -11 3 701 772 162 114 43 chrX 15224297 15224491 -151425805 - MTD LTR MaLR 0 419 197 3 701 1337 56 11 0 chrX 15224491 15224669 -151425627 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 701 622 211 122 33 chrX 15224669 15224687 -151425609 - MTD LTR MaLR -211 196 181 3 701 5364 94 50 9 chrX 15224698 15224954 -151425342 - L1_Mus3 LINE L1 0 6638 6369 3 701 1011 193 31 126 chrX 15224954 15225310 -151424986 + RLTRETN_Mm LTR ERVK 1 322 0 3 701 5364 94 50 9 chrX 15225310 15225828 -151424468 - L1_Mus3 LINE L1 -270 6368 5832 3 701 2662 43 0 111 chrX 15225828 15226217 -151424079 - ORR1A0 LTR MaLR 0 346 1 3 701 13769 57 14 1 chrX 15226217 15227985 -151422311 - ORR1A0-int LTR MaLR 0 1792 1 3 701 502 60 0 0 chrX 15227985 15228052 -151422244 - ORR1A0 LTR MaLR 0 346 280 3 701 620 25 0 0 chrX 15228049 15228129 -151422167 - ORR1A0 LTR MaLR -266 80 1 3 701 2539 158 37 0 chrX 15228129 15228560 -151421736 - L1_Mus3 LINE L1 -47 5836 5390 3 701 5431 151 34 9 chrX 15228557 15229547 -151420749 + L1_Mm LINE L1 4124 5138 -745 3 701 5957 111 6 36 chrX 15229542 15230519 -151419777 - Lx3_Mus LINE L1 -529 6480 5539 3 701 3624 115 2 4 chrX 15230519 15231042 -151419254 + Lx3_Mus LINE L1 6488 7009 0 3 701 1210 179 4 0 chrX 15231062 15231297 -151418999 + L1_Mur2 LINE L1 5121 5356 -521 3 701 315 331 28 63 chrX 15231297 15231439 -151418857 - MTD LTR MaLR -188 191 55 3 701 642 122 112 0 chrX 15231439 15231546 -151418750 + L1Md_F2 LINE L1 5927 6045 -537 3 701 280 405 41 8 chrX 15231624 15231746 -151418550 - ORR1E LTR MaLR -208 151 26 3 701 351 362 19 62 chrX 15231911 15231940 -151418356 + ID_B1 SINE B4 59 127 -97 3 701 367 320 10 0 chrX 15231940 15232040 -151418256 + PB1D10 SINE Alu 9 109 -8 3 701 351 362 19 62 chrX 15232040 15232073 -151418223 + ID_B1 SINE B4 128 213 -11 3 701 210 307 194 22 chrX 15232073 15232253 -151418043 + L2 LINE L2 2869 3079 -340 3 701 276 273 146 11 chrX 15232516 15232605 -151417691 + MLT1N2 LTR MaLR 400 500 -62 3 701 3424 113 0 0 chrX 15232807 15233293 -151417003 + L1_Mus4 LINE L1 5293 5778 -105 3 701 2759 94 115 0 chrX 15233293 15233719 -151416577 - IAPLTR2_Mm LTR ERVK 0 475 1 3 701 14191 60 12 3 chrX 15233721 15235508 -151414788 - IAPEz-int LTR ERVK -2 6479 4678 3 701 1857 99 8 0 chrX 15235526 15235778 -151414518 - IAPEz-int LTR ERVK -5183 2497 2244 3 701 979 50 0 0 chrX 15235773 15235892 -151414404 - IAPEz-int LTR ERVK -5004 1477 1359 3 701 4818 68 4 43 chrX 15235892 15236572 -151413724 - IAPEz-int LTR ERVK -5819 662 9 3 701 2802 99 94 0 chrX 15236573 15237007 -151413289 - IAPLTR2_Mm LTR ERVK 0 475 1 3 701 517 104 0 0 chrX 15237007 15237084 -151413212 + L1_Mus4 LINE L1 5773 5849 -787 3 701 16566 168 33 39 chrX 15237086 15241081 -151409215 - L1Md_A LINE L1 -1843 4040 220 3 701 2494 190 10 63 chrX 15241085 15241691 -151408605 - L1_Mur3 LINE L1 -1014 4863 4290 3 701 3193 213 53 30 chrX 15241762 15242661 -151407635 - L1_Mur3 LINE L1 -1928 3952 3033 3 701 1892 264 97 70 chrX 15242676 15243402 -151406894 + RMER19A LTR ERVK 1 902 0 3 701 712 256 85 5 chrX 15243702 15243902 -151406394 - B3 SINE B2 0 216 1 3 701 2504 280 120 7 chrX 15244125 15245193 -151405103 - Lx6 LINE L1 -63 7397 5955 3 701 660 261 106 0 chrX 15246078 15246266 -151404030 - B3 SINE B2 -5 211 4 3 701 1249 182 4 0 chrX 15246402 15246627 -151403669 - Lx2 LINE L1 -7 6990 6765 3 701 21246 149 35 16 chrX 15246627 15248002 -151402294 - Lx2 LINE L1 -363 6634 5288 3 701 1630 48 0 5 chrX 15248002 15248209 -151402087 - L1Md_F2 LINE L1 -14 6568 6363 3 701 21246 175 31 45 chrX 15248209 15248916 -151401380 - Lx2 LINE L1 -596 5287 4609 3 701 1153 64 0 0 chrX 15248916 15249057 -151401239 - B1_Mus1 SINE Alu -7 141 1 3 701 21246 175 31 45 chrX 15249057 15249364 -151400932 - Lx2 LINE L1 -1275 4608 4299 3 701 706 236 117 68 chrX 15249364 15249715 -151400581 - RLTR9A LTR ERVK 0 368 1 3 701 21246 165 25 37 chrX 15249715 15253424 -151396872 - Lx2 LINE L1 -1585 4298 590 3 701 2260 226 64 8 chrX 15253406 15253909 -151396387 - Lx2 LINE L1 -5769 888 358 3 701 25 31 0 0 chrX 15253921 15253953 -151396343 + AT_rich Low_complexity Low_complexity 1 32 0 3 701 366 42 0 0 chrX 15254478 15254526 -151395770 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 701 3206 39 18 0 chrX 15255863 15256252 -151394044 + MTA_Mm LTR MaLR 1 396 0 3 701 1373 286 121 3 chrX 15256546 15257125 -151393171 + MER82 DNA MER2_type 2 648 -5 3 701 788 286 39 10 chrX 15257294 15257499 -151392797 + B3 SINE B2 1 211 -5 3 701 463 275 39 82 chrX 15257514 15257771 -151392525 + L1MD3 LINE L1 7746 7991 -4 3 701 430 303 39 75 chrX 15257796 15258078 -151392218 + L1ME2 LINE L1 5344 5615 -564 3 701 505 327 77 38 chrX 15258215 15258606 -151391690 + L1ME2 LINE L1 5665 6070 -94 3 701 35 24 0 0 chrX 15258608 15258650 -151391646 + AT_rich Low_complexity Low_complexity 1 42 0 3 701 379 287 23 53 chrX 15258812 15258969 -151391327 - MER5A DNA MER1_type -30 159 9 3 701 185 304 56 28 chrX 15258970 15259041 -151391255 + MIR SINE MIR 32 104 -158 3 701 272 70 0 23 chrX 15259331 15259375 -151390921 + (TCTCTG)n Simple_repeat Simple_repeat 6 48 0 3 701 384 40 0 0 chrX 15259397 15259447 -151390849 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 701 425 299 26 13 chrX 15259454 15259610 -151390686 - L1MD3 LINE L1 -385 7783 7626 3 701 29 84 0 0 chrX 15259776 15259847 -151390449 + AT_rich Low_complexity Low_complexity 1 71 0 3 701 374 272 71 2 chrX 15259937 15260131 -151390165 - L1MD3 LINE L1 -1480 6735 6512 3 701 313 268 71 30 chrX 15260255 15260424 -151389872 - L1MD3 LINE L1 -814 5505 5330 3 701 7659 127 5 20 chrX 15260418 15262409 -151387887 - L1_Mus2 LINE L1 -1 6565 4613 3 701 773 112 0 0 chrX 15262410 15262517 -151387779 - U6 snRNA snRNA 0 107 1 3 701 450 347 96 28 chrX 15262517 15263299 -151386997 - L1MD3 LINE L1 -958 5361 4527 3 701 225 108 0 0 chrX 15263308 15263345 -151386951 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 701 610 296 90 101 chrX 15263450 15263622 -151386674 - L1MD LINE L1 -2026 4120 3951 3 701 504 294 79 44 chrX 15263622 15263825 -151386471 + B3 SINE B2 1 210 -6 3 701 610 296 90 101 chrX 15263825 15264216 -151386080 - L1MD LINE L1 -2196 3950 3563 3 701 8287 146 23 23 chrX 15264243 15265233 -151385063 - Lx2 LINE L1 -1 6996 5988 3 701 1070 100 0 0 chrX 15265233 15265373 -151384923 + B1_Mus1 SINE Alu 1 140 -8 3 701 8287 135 11 13 chrX 15265373 15266010 -151384286 - Lx2 LINE L1 -1010 5987 5370 3 701 365 163 105 67 chrX 15266034 15266139 -151384157 + B1_Mur2 SINE Alu 40 148 -1 3 701 304 252 87 31 chrX 15266188 15266315 -151383981 - L1MD3 LINE L1 -3322 2997 2864 3 701 1115 316 88 26 chrX 15266321 15266965 -151383331 - L1MD3 LINE L1 -5677 723 40 3 701 263 372 0 0 chrX 15267759 15267837 -151382459 + MLT1A0 LTR MaLR 217 294 -71 3 701 234 0 0 0 chrX 15267841 15267867 -151382429 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 701 11080 125 21 5 chrX 15268131 15270016 -151380280 + MusHAL1 LINE L1 208 2123 -589 3 701 9678 122 5 3 chrX 15270013 15272278 -151378018 + L1_Mus3 LINE L1 4367 6635 -3 3 701 420 282 90 9 chrX 15273754 15273865 -151376431 + B3A SINE B2 12 131 -67 3 701 594 267 8 0 chrX 15273892 15274023 -151376273 + Lx9 LINE L1 6534 6665 -979 3 701 276 30 0 0 chrX 15274033 15274066 -151376230 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 3 701 252 75 66 118 chrX 15274068 15274144 -151376152 - B1_Mur4 SINE Alu -1 149 78 3 701 1564 311 25 27 chrX 15274159 15274721 -151375575 + Lx9 LINE L1 6665 7225 -419 3 701 343 291 38 12 chrX 15274771 15274931 -151375365 - Charlie5 DNA MER1_type -549 2075 1912 3 701 603 27 0 0 chrX 15275640 15275713 -151374583 + (GAAA)n Simple_repeat Simple_repeat 3 75 0 3 701 311 263 0 0 chrX 15275750 15275826 -151374470 + L1MA5 LINE L1 5634 5709 -591 3 701 584 280 67 46 chrX 15275874 15276284 -151374012 + L1MA5 LINE L1 5852 6270 -30 3 701 693 62 0 18 chrX 15276323 15276437 -151373859 + L1_Mus4 LINE L1 6523 6634 -2 3 701 205 218 0 18 chrX 15276440 15276496 -151373800 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 3 701 231 114 0 0 chrX 15277284 15277319 -151372977 + (CAG)n Simple_repeat Simple_repeat 1 35 0 3 701 673 298 17 0 chrX 15278471 15278652 -151371644 + B3 SINE B2 4 187 -29 3 701 9366 94 26 3 chrX 15278683 15280334 -151369962 + Lx3_Mus LINE L1 5314 7009 0 3 701 996 143 0 0 chrX 15280413 15280560 -151369736 + B1_Mus1 SINE Alu 1 147 -1 3 701 396 0 0 0 chrX 15280560 15280604 -151369692 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 701 26 0 0 0 chrX 15281773 15281799 -151368497 + AT_rich Low_complexity Low_complexity 1 26 0 3 701 686 303 32 0 chrX 15281843 15282031 -151368265 + B3 SINE B2 18 211 -5 3 701 220 286 0 0 chrX 15282763 15282812 -151367484 + ID_B1 SINE B4 81 129 -95 3 701 291 284 0 0 chrX 15282804 15282871 -151367425 - B3A SINE B2 -90 108 42 3 701 1028 206 32 32 chrX 15283091 15283307 -151366989 + B3 SINE B2 1 216 0 3 701 21 82 0 0 chrX 15283316 15283365 -151366931 + AT_rich Low_complexity Low_complexity 1 49 0 3 701 6808 111 5 9 chrX 15284067 15284856 -151365440 - L1_Mus4 LINE L1 -7 6629 5841 3 701 3078 58 2 25 chrX 15284856 15285261 -151365035 + MTA_Mm LTR MaLR 1 396 0 3 701 6808 136 5 13 chrX 15285261 15285497 -151364799 - L1_Mus4 LINE L1 -427 5870 5644 3 701 27229 134 7 9 chrX 15285782 15288870 -151361426 - L1_Mus2 LINE L1 0 6566 3488 3 701 207 0 0 0 chrX 15288870 15288893 -151361403 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 701 27229 159 20 19 chrX 15288893 15291926 -151358370 - L1_Mus2 LINE L1 -2396 3487 395 3 701 188 0 74 0 chrX 15291988 15292015 -151358281 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 4 701 4843 79 6 5 chrX 15292027 15292666 -151357630 - L1_Mus1 LINE L1 -6 6561 5922 4 701 15665 163 16 11 chrX 15292671 15295675 -151354621 - L1_Mm LINE L1 -890 4993 1975 4 701 231 326 11 0 chrX 15296355 15296444 -151353852 + MIR SINE MIR 64 153 -109 4 701 261 287 143 92 chrX 15296765 15296884 -151353412 - B2_Mm2 SINE B2 -69 126 2 4 701 228 292 0 0 chrX 15296996 15297085 -151353211 - L1MC4 LINE L1 -221 7821 7733 4 701 9754 86 3 1 chrX 15297648 15298995 -151351301 + L1Md_F2 LINE L1 4238 5586 -297 4 701 7479 70 5 3 chrX 15298996 15299976 -151350320 + L1Md_F2 LINE L1 5588 6569 -13 4 701 6317 94 6 78 chrX 15299981 15301045 -151349251 - MT-int LTR MaLR -110 988 2 4 701 574 275 58 0 chrX 15301649 15301787 -151348509 - B1_Mur2 SINE Alu -2 147 2 4 701 432 91 0 0 chrX 15302611 15302677 -151347619 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 701 636 295 20 49 chrX 15302892 15303095 -151347201 - B3A SINE B2 -1 197 1 4 701 1025 110 7 0 chrX 15303404 15303549 -151346747 - B1_Mus1 SINE Alu 0 148 3 4 701 180 0 0 0 chrX 15303674 15303694 -151346602 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 701 454 248 99 0 chrX 15304696 15304797 -151345499 + B1_Mur2 SINE Alu 2 112 -37 4 701 696 35 0 0 chrX 15304816 15304903 -151345393 + (GA)n Simple_repeat Simple_repeat 2 88 0 4 701 417 357 32 16 chrX 15304905 15305090 -151345206 + MER115 DNA Tip100 506 693 0 4 701 324 331 56 8 chrX 15305180 15305305 -151344991 + MIR3 SINE MIR 55 185 -23 4 701 294 167 0 0 chrX 15306086 15306146 -151344150 + (CATA)n Simple_repeat Simple_repeat 2 61 0 4 701 449 360 126 11 chrX 15306336 15306527 -151343769 - MER58A DNA MER1_type -11 213 1 4 701 285 340 68 20 chrX 15306527 15306674 -151343622 - MIR SINE MIR -88 174 21 4 701 1113 96 0 0 chrX 15306911 15307057 -151343239 + B1_Mus1 SINE Alu 3 148 0 4 701 214 175 0 45 chrX 15307112 15307178 -151343118 + (TTTAA)n Simple_repeat Simple_repeat 3 65 0 4 701 216 97 0 0 chrX 15307225 15307256 -151343040 + (TAA)n Simple_repeat Simple_repeat 1 31 0 4 701 322 341 0 0 chrX 15307402 15307493 -151342803 - MIR SINE MIR -163 99 9 4 701 2823 97 40 46 chrX 15307914 15308392 -151341904 + IAPLTR2_Mm LTR ERVK 1 475 0 4 701 469 337 39 66 chrX 15308401 15308582 -151341714 + LTR16C LTR ERVL 100 275 -214 4 701 12259 22 0 0 chrX 15308603 15310034 -151340262 + L1Md_T LINE L1 4156 5586 -297 4 701 8074 53 0 0 chrX 15310034 15311029 -151339267 + L1Md_T LINE L1 5587 6581 -1 4 701 390 240 10 0 chrX 15311039 15311135 -151339161 + MER2 DNA MER2_type 114 210 -135 4 701 264 197 0 57 chrX 15311102 15311172 -151339124 - U2 snRNA snRNA -122 66 1 4 701 690 316 88 5 chrX 15311518 15311548 -151338748 - B3 SINE B2 -5 211 183 4 701 294 73 0 0 chrX 15311548 15311589 -151338707 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 701 690 316 88 5 chrX 15311589 15311752 -151338544 - B3 SINE B2 -34 182 4 4 701 26 0 0 0 chrX 15312652 15312678 -151337618 + AT_rich Low_complexity Low_complexity 1 26 0 4 701 609 311 169 34 chrX 15313171 15313546 -151336750 + Lx8 LINE L1 6916 7352 -121 4 701 490 15 30 0 chrX 15313546 15313613 -151336683 + (CAAAA)n Simple_repeat Simple_repeat 2 70 0 4 701 609 311 169 34 chrX 15313613 15313703 -151336593 + Lx8 LINE L1 7353 7444 -29 4 701 21 0 0 0 chrX 15314261 15314282 -151336014 + AT_rich Low_complexity Low_complexity 1 21 0 4 701 1311 164 52 24 chrX 15314527 15314815 -151335481 - Lx LINE L1 -1 6653 6358 4 701 9807 141 17 24 chrX 15314870 15317122 -151333174 + L1VL4 LINE L1 294 2520 -1039 4 701 1291 154 0 190 chrX 15317409 15317794 -151332502 + L1_Mm LINE L1 2953 3264 -2619 4 701 37058 26 2 7 chrX 15317795 15322999 -151327297 + L1Md_A LINE L1 416 5586 -297 4 701 8355 33 2 0 chrX 15322999 15323993 -151326303 + L1Md_T LINE L1 5587 6582 0 4 701 2129 126 50 0 chrX 15323995 15324359 -151325937 + L1VL4 LINE L1 2897 3278 -281 4 701 6593 122 28 21 chrX 15324386 15325480 -151324816 + L1_Mus4 LINE L1 5530 6630 -6 4 701 414 346 84 39 chrX 15325526 15325836 -151324460 - MER34A1 LTR ERV1 -217 370 47 4 701 251 207 135 79 chrX 15326224 15326313 -151323983 - ORR1D2 LTR MaLR -3 367 274 4 701 264 396 20 7 chrX 15326741 15326891 -151323405 - RSINE1 SINE B4 -13 152 1 4 701 955 297 68 26 chrX 15327443 15327487 -151322809 + MTEb LTR MaLR 56 96 -283 4 701 441 0 0 0 chrX 15327487 15327536 -151322760 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 701 1040 260 87 26 chrX 15327536 15327802 -151322494 + MTEb LTR MaLR 97 379 0 4 701 195 139 0 0 chrX 15327928 15327964 -151322332 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 4 701 484 363 50 19 chrX 15327964 15328124 -151322172 - RSINE1 SINE B4 0 165 1 4 701 29 28 0 0 chrX 15328267 15328303 -151321993 + AT_rich Low_complexity Low_complexity 1 36 0 4 701 4569 22 0 7 chrX 15328508 15329046 -151321250 + L1Md_A LINE L1 6048 6581 -1 4 701 485 71 14 0 chrX 15329297 15329367 -151320929 + (TC)n Simple_repeat Simple_repeat 2 72 0 4 701 1575 84 0 9 chrX 15330260 15330476 -151319820 - L1Md_F2 LINE L1 -168 6414 6201 4 701 1151 61 6 18 chrX 15330476 15330642 -151319654 + L1Md_F2 LINE L1 6417 6580 -2 4 701 485 293 109 69 chrX 15332469 15332773 -151317523 - Lx6 LINE L1 -24 7436 7121 4 701 5674 98 13 0 chrX 15333085 15333252 -151317044 - L1VL4 LINE L1 -1832 1727 1558 4 701 354 45 0 0 chrX 15333252 15333296 -151317000 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 701 5674 113 10 0 chrX 15333296 15334647 -151315649 - L1VL4 LINE L1 -2002 1557 193 4 702 921 121 0 0 chrX 15336750 15336813 -151313483 + (TTC)n Simple_repeat Simple_repeat 3 65 0 4 702 1092 133 0 0 chrX 15336813 15336993 -151313303 + (TCC)n Simple_repeat Simple_repeat 1 180 0 4 702 921 121 0 0 chrX 15336993 15337078 -151313218 + (TTC)n Simple_repeat Simple_repeat 2 86 0 4 702 426 39 0 0 chrX 15337095 15337147 -151313149 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 702 402 21 0 0 chrX 15337559 15337606 -151312690 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 702 342 226 28 9 chrX 15337609 15337716 -151312580 + Lx9 LINE L1 7534 7642 -2 4 702 472 291 48 39 chrX 15337724 15337931 -151312365 - L2 LINE L2 -1887 1532 1324 4 702 617 297 18 0 chrX 15337984 15338149 -151312147 + LTR86B1 LTR ERVL 318 485 -8 4 702 465 410 82 50 chrX 15338515 15338702 -151311594 - LTR16B1 LTR ERVL 0 480 288 4 702 315 0 0 0 chrX 15338702 15338737 -151311559 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 702 423 0 0 0 chrX 15338737 15338783 -151311513 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 702 465 410 82 50 chrX 15338783 15339059 -151311237 - LTR16B1 LTR ERVL -193 287 2 4 702 4438 134 25 24 chrX 15339213 15340021 -151310275 - RMER17D2 LTR ERVK 0 809 1 4 702 192 354 137 8 chrX 15340099 15340230 -151310066 + L2c LINE L2 3190 3337 -50 4 702 1751 139 72 21 chrX 15340242 15340630 -151309666 + RMER17C LTR ERVK 3 410 0 4 702 4242 199 67 23 chrX 15340656 15341526 -151308770 - RMER13B LTR ERVK 0 908 1 4 702 328 234 26 0 chrX 15341618 15341695 -151308601 + MER119 DNA MER1_type 455 533 -50 4 702 2646 217 54 48 chrX 15342956 15343679 -151306617 - Lx9 LINE L1 -2 7642 6916 4 702 2308 45 0 0 chrX 15343689 15343977 -151306319 - ORR1A1 LTR MaLR -58 288 1 4 702 1324 57 6 0 chrX 15343977 15344152 -151306144 - ORR1A1-int LTR MaLR 0 1792 1617 4 702 1950 217 31 15 chrX 15344152 15344541 -151305755 - Lx9 LINE L1 -729 6915 6521 4 702 489 339 96 83 chrX 15344711 15345023 -151305273 - ORR1E LTR MaLR -43 316 1 4 702 281 307 105 53 chrX 15345049 15345372 -151304924 + L1MD LINE L1 4032 4371 -1775 4 702 2262 155 13 18 chrX 15345607 15346001 -151304295 + Lx3B LINE L1 6581 6972 -1 4 702 10939 135 4 21 chrX 15346068 15348785 -151301511 + L1VL1 LINE L1 193 2862 -836 4 702 6592 118 35 5 chrX 15348781 15350453 -151299843 + L1_Mus3 LINE L1 4915 6637 -1 4 702 884 286 61 18 chrX 15350468 15350859 -151299437 + L1MD LINE L1 4481 4888 -1258 4 702 718 277 38 34 chrX 15350873 15351082 -151299214 - B3 SINE B2 -1 215 6 4 702 2016 104 7 13 chrX 15351108 15351418 -151298878 - L1_Mus2 LINE L1 -1 6565 6258 4 702 1860 47 4 0 chrX 15351435 15351667 -151298629 + L1_Mus2 LINE L1 5587 5819 -747 4 702 529 264 68 23 chrX 15351752 15352016 -151298280 + L1MD LINE L1 5013 5288 -858 4 702 306 338 118 7 chrX 15352057 15352465 -151297831 + L1MD LINE L1 5376 5828 -351 4 702 237 373 0 0 chrX 15352832 15352907 -151297389 - ID4 SINE ID -6 77 3 4 702 378 0 0 0 chrX 15354141 15354183 -151296113 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 702 22 0 0 0 chrX 15354439 15354461 -151295835 + AT_rich Low_complexity Low_complexity 1 22 0 4 702 30378 117 42 5 chrX 15355200 15356964 -151293332 + L1Md_F2 LINE L1 128 1961 -3922 4 702 353 22 22 0 chrX 15356964 15357010 -151293286 + (CAAAA)n Simple_repeat Simple_repeat 4 50 0 4 702 30378 91 6 11 chrX 15357010 15360658 -151289638 + L1Md_F2 LINE L1 1962 5586 -297 4 702 7381 77 3 7 chrX 15360658 15361654 -151288642 + L1Md_F2 LINE L1 5587 6578 -4 4 702 249 239 127 0 chrX 15361710 15361781 -151288515 + B3 SINE B2 129 208 -8 4 702 499 276 40 70 chrX 15362184 15362383 -151287913 - Tigger7 DNA MER2_type -1 2490 2298 4 702 515 259 9 0 chrX 15362424 15362536 -151287760 - PB1D9 SINE Alu -1 119 7 4 702 265 343 20 10 chrX 15362596 15362696 -151287600 - Tigger7 DNA MER2_type -2390 101 1 4 702 967 258 135 52 chrX 15363302 15363687 -151286609 - MTD LTR MaLR -2 417 1 4 702 297 0 0 0 chrX 15363814 15363847 -151286449 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 702 309 218 63 13 chrX 15364708 15364787 -151285509 - ID4_ SINE ID 0 83 1 4 702 189 0 0 0 chrX 15365614 15365635 -151284661 + (T)n Simple_repeat Simple_repeat 1 21 0 4 702 975 117 0 0 chrX 15365905 15366085 -151284211 + (TTC)n Simple_repeat Simple_repeat 1 180 0 4 702 203 184 0 0 chrX 15366090 15366128 -151284168 + CT-rich Low_complexity Low_complexity 3 40 0 4 702 960 89 74 0 chrX 15366194 15366329 -151283967 + B1_Mm SINE Alu 2 146 -1 4 702 286 337 20 30 chrX 15366561 15366662 -151283634 - L2a LINE L2 0 3426 3327 4 702 235 49 49 0 chrX 15366706 15366747 -151283549 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 702 230 358 112 52 chrX 15366952 15367185 -151283111 + ORR1E LTR MaLR 87 333 -26 4 702 37634 48 0 3 chrX 15367185 15373690 -151276606 - L1Md_T LINE L1 -31 6554 1 4 702 237 371 57 0 chrX 15373961 15374066 -151276230 + MLT1F2 LTR MaLR 436 546 -14 5 702 242 309 43 43 chrX 15374077 15374192 -151276104 - RLTR14 LTR ERV1 -12 370 256 5 702 811 243 36 49 chrX 15374494 15374801 -151275495 + RMER17C LTR ERVK 56 358 -52 5 702 268 234 32 0 chrX 15374848 15374928 -151275368 - RMER13A LTR ERVK -100 808 718 5 702 2612 168 26 6 chrX 15374940 15375408 -151274888 + RMER5 LTR ERV1 50 526 -8 5 702 205 70 0 65 chrX 15375408 15375454 -151274842 + (TTTTTG)n Simple_repeat Simple_repeat 3 45 0 5 702 250 337 10 43 chrX 15376334 15376449 -151273847 - MIRm SINE MIR -113 163 53 5 702 357 24 0 0 chrX 15376528 15376570 -151273726 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 702 258 365 165 12 chrX 15377196 15377529 -151272767 + L2a LINE L2 2915 3298 -128 5 702 32092 71 53 2 chrX 15378060 15383952 -151266344 - L1Md_F3 LINE L1 0 6584 414 5 702 21723 152 20 22 chrX 15383965 15385938 -151264358 + L1VL4 LINE L1 823 2818 -3065 5 702 5198 65 1 1 chrX 15385938 15386614 -151263682 + L1_Mus1 LINE L1 5891 6566 -1 5 702 21723 149 17 24 chrX 15386614 15387310 -151262986 + L1VL4 LINE L1 2819 3476 -2407 5 702 220 0 86 0 chrX 15387310 15387345 -151262951 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 5 702 21723 149 17 24 chrX 15387345 15388008 -151262288 + L1VL4 LINE L1 3477 4160 -1723 5 702 1626 10 0 0 chrX 15388008 15388225 -151262071 + L1Md_T LINE L1 6383 6582 0 5 702 21723 149 17 24 chrX 15388225 15389299 -151260997 + L1VL4 LINE L1 4161 5212 -671 5 702 333 350 50 0 chrX 15389383 15389503 -151260793 + B3 SINE B2 2 127 -89 5 702 306 0 0 0 chrX 15389510 15389544 -151260752 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 5 702 2117 88 26 7 chrX 15389626 15389935 -151260361 + L1_Mus1 LINE L1 6253 6567 0 5 702 844 169 0 17 chrX 15389942 15390117 -151260179 + GA-rich Low_complexity Low_complexity 2 173 0 5 702 391 299 50 17 chrX 15390119 15390238 -151260058 - B1F SINE Alu -19 130 8 5 702 376 331 8 8 chrX 15390132 15390254 -151260042 - ID_B1 SINE B4 -30 194 73 5 702 233 114 0 0 chrX 15390270 15390314 -151259982 - L1_Mus2 LINE L1 -1 6565 6522 5 702 193 342 66 33 chrX 15390404 15390525 -151259771 - MIR SINE MIR -34 228 104 5 702 571 260 239 30 chrX 15390992 15391293 -151259003 - MLT1A1 LTR MaLR -44 364 1 5 702 200 319 2 30 chrX 15391294 15391360 -151258936 - MIRc SINE MIR -167 101 31 5 702 785 234 95 15 chrX 15392220 15392420 -151257876 + B3 SINE B2 1 216 0 5 702 249 108 0 0 chrX 15392883 15392920 -151257376 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 702 700 238 47 24 chrX 15393325 15393536 -151256760 + L1_Mur3 LINE L1 56 271 -7441 5 702 222 37 0 0 chrX 15393560 15393587 -151256709 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 702 818 235 100 3 chrX 15393588 15393878 -151256418 + L1_Mur3 LINE L1 843 1160 -6552 5 702 246 62 0 0 chrX 15393886 15393918 -151256378 + (ATGGTG)n Simple_repeat Simple_repeat 1 32 0 5 702 486 75 0 0 chrX 15393919 15393986 -151256310 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 702 1128 176 58 8 chrX 15393987 15394245 -151256051 - L1_Mur3 LINE L1 -3823 2057 1787 5 702 805 287 75 4 chrX 15394480 15394735 -151255561 + Lx8 LINE L1 7196 7468 -5 5 702 3572 132 3 6 chrX 15394935 15396007 -151254289 + L1VL4 LINE L1 138 1412 -2147 5 702 5661 162 9 28 chrX 15395994 15397092 -151253204 + L1_Mm LINE L1 3839 4915 -968 5 702 405 148 11 0 chrX 15397081 15397173 -151253123 + L1_Mm LINE L1 5176 5276 -607 5 702 1958 126 86 33 chrX 15397194 15397588 -151252708 - RLTR9F LTR ERVK 0 415 1 5 702 404 125 27 14 chrX 15397589 15397662 -151252634 - ETnERV2-int LTR ERVK -2 7404 7331 5 702 14437 202 27 26 chrX 15397872 15401593 -151248703 - ETnERV2-int LTR ERVK -1166 6240 1660 5 702 1384 258 16 13 chrX 15401601 15402105 -151248191 - ETnERV2-int LTR ERVK -2636 678 108 5 702 8885 95 4 10 chrX 15402107 15403747 -151246549 + L1Md_F2 LINE L1 794 2521 -3365 5 702 8042 90 2 2 chrX 15403738 15404848 -151245448 + L1Md_F2 LINE L1 4479 5588 -298 5 702 6561 112 9 6 chrX 15404849 15405336 -151244960 + L1Md_F2 LINE L1 5590 6077 -508 5 702 270 0 0 0 chrX 15405336 15405366 -151244930 + (CATAC)n Simple_repeat Simple_repeat 5 34 0 5 702 6561 112 9 6 chrX 15405366 15405867 -151244429 + L1Md_F2 LINE L1 6078 6580 -5 5 702 27 0 0 0 chrX 15405951 15405978 -151244318 + AT_rich Low_complexity Low_complexity 1 27 0 5 702 225 0 0 0 chrX 15405985 15406010 -151244286 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 5 702 1903 158 57 27 chrX 15406119 15406522 -151243774 - RLTR9F LTR ERVK 0 415 1 5 702 6862 128 6 7 chrX 15406522 15407881 -151242415 + L1_Mus4 LINE L1 5278 6631 -5 5 702 214 50 0 48 chrX 15409016 15409058 -151241238 + (TAAAAA)n Simple_repeat Simple_repeat 2 41 0 5 702 300 299 132 26 chrX 15409669 15409896 -151240400 - L1ME3B LINE L1 -259 5981 5731 5 702 351 278 166 11 chrX 15409996 15410171 -151240125 - L1ME3B LINE L1 -643 5597 5396 5 702 328 274 80 0 chrX 15410256 15410369 -151239927 - L1ME2 LINE L1 -3 6161 6040 5 702 285 313 68 87 chrX 15410376 15410537 -151239759 + B4A SINE B4 8 165 -127 5 702 255 325 50 0 chrX 15410559 15410639 -151239657 + RSINE1 SINE B4 78 161 -4 5 702 348 83 0 0 chrX 15410676 15410724 -151239572 + (ATG)n Simple_repeat Simple_repeat 1 48 0 5 702 4118 180 59 78 chrX 15410788 15411708 -151238588 - RMER19B LTR ERVK 0 902 1 5 702 225 347 0 0 chrX 15411778 15411853 -151238443 + MLT1F1 LTR MaLR 1 75 -473 5 702 1095 259 62 8 chrX 15411894 15412151 -151238145 + MTD LTR MaLR 1 271 -148 5 702 809 293 116 5 chrX 15412218 15412577 -151237719 + MLT1F1 LTR MaLR 153 566 -3 5 702 261 75 0 0 chrX 15412814 15412854 -151237442 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 702 535 279 50 75 chrX 15413084 15413324 -151236972 + RMER2 LTR ERV1 334 567 0 5 702 265 343 9 36 chrX 15413408 15413520 -151236776 + MER34 LTR ERV1 6 114 -428 5 702 298 269 301 14 chrX 15413563 15413706 -151236590 + MER34A1 LTR ERV1 60 243 -344 5 702 315 269 117 22 chrX 15413755 15413934 -151236362 + MER34A1 LTR ERV1 319 514 -73 5 702 310 207 0 0 chrX 15414151 15414218 -151236078 - ID4 SINE ID -58 94 28 5 702 1381 73 15 35 chrX 15414259 15414458 -151235838 - B2_Mm2 SINE B2 0 195 1 5 702 435 275 107 0 chrX 15414463 15414594 -151235702 - B1F2 SINE Alu 0 149 5 5 702 326 331 95 11 chrX 15414592 15414781 -151235515 + MER34 LTR ERV1 338 542 0 5 702 422 309 79 0 chrX 15414594 15414614 -151235682 - ID_B1 SINE B4 -2 221 59 5 702 240 291 99 52 chrX 15414950 15415142 -151235154 + RLTR21 LTR ERVK 1086 1286 -286 5 702 302 242 141 0 chrX 15415413 15415512 -151234784 - L1M2 LINE L1 -495 5805 5693 5 702 779 260 232 9 chrX 15415516 15415857 -151234439 + MTD LTR MaLR 1 417 -2 5 702 225 24 47 23 chrX 15416005 15416048 -151234248 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 5 702 516 276 78 7 chrX 15416678 15416831 -151233465 + B3A SINE B2 24 187 -11 5 702 973 122 7 0 chrX 15416851 15416990 -151233306 + B1_Mus1 SINE Alu 1 140 -8 5 702 443 278 89 14 chrX 15417012 15417158 -151233138 - RSINE1 SINE B4 -6 159 3 5 702 498 308 68 7 chrX 15417291 15417438 -151232858 - B3 SINE B2 -56 160 5 5 702 594 0 0 0 chrX 15417556 15417622 -151232674 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 702 235 341 51 28 chrX 15418135 15418352 -151231944 - L1MEe LINE L1 -4446 408 187 5 702 667 217 14 7 chrX 15418990 15419134 -151231162 - B1_Mur1 SINE Alu -3 146 2 5 702 216 0 0 0 chrX 15419310 15419334 -151230962 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 702 329 238 25 12 chrX 15419723 15419804 -151230492 - L1MEg LINE L1 -4137 1947 1866 5 702 278 235 10 133 chrX 15421643 15421741 -151228555 - LTR48B LTR ERV1 -26 761 676 5 702 304 301 139 7 chrX 15422448 15422585 -151227711 - LTR48B LTR ERV1 -367 277 123 5 702 341 258 41 41 chrX 15422730 15422827 -151227469 + PB1D7 SINE Alu 17 113 -7 5 702 703 211 24 153 chrX 15423049 15423393 -151226903 - Lx7 LINE L1 -2 7694 7400 5 702 4827 128 78 18 chrX 15423393 15424244 -151226052 - RLTR13D6 LTR ERVK 0 902 1 5 702 703 211 24 153 chrX 15424244 15424279 -151226017 - Lx7 LINE L1 -297 7399 7365 5 702 1961 178 14 11 chrX 15424716 15425069 -151225227 - ORR1B1 LTR MaLR 0 394 41 5 702 523 300 93 23 chrX 15425213 15425523 -151224773 - L1MDa LINE L1 -6275 358 27 5 702 374 324 78 22 chrX 15425530 15425760 -151224536 - L1MEc LINE L1 -4191 2209 1967 5 702 294 338 76 84 chrX 15425785 15425887 -151224409 - Lx8 LINE L1 -37 7436 7346 5 702 192 40 0 0 chrX 15425887 15425912 -151224384 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 5 702 294 333 48 63 chrX 15425912 15426209 -151224087 - Lx8 LINE L1 -128 7345 7029 5 702 1010 282 110 43 chrX 15426331 15427291 -151223005 - L1MB8 LINE L1 -4 6174 5150 5 702 3102 232 65 116 chrX 15427293 15428015 -151222281 + L1_Mur3 LINE L1 275 1044 -6684 5 702 228 43 65 0 chrX 15428015 15428061 -151222235 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 702 6302 201 84 52 chrX 15428061 15430093 -151220203 + L1_Mur3 LINE L1 1045 3052 -2828 5 702 602 137 44 88 chrX 15430122 15430196 -151220100 + URR1A DNA MER1_type 57 130 -96 5 702 2801 98 28 122 chrX 15430196 15430728 -151219568 - RLTR45 LTR ERVK 0 482 1 5 702 602 137 44 88 chrX 15430728 15430789 -151219507 + URR1A DNA MER1_type 131 186 -40 5 702 856 212 274 14 chrX 15430803 15431157 -151219139 + L1_Mur3 LINE L1 3047 3492 -2388 5 702 812 189 24 34 chrX 15431140 15431348 -151218948 + Lx LINE L1 6449 6654 0 5 702 821 159 0 52 chrX 15431353 15431506 -151218790 + L1_Mur3 LINE L1 3461 3605 -2272 5 702 519 224 13 145 chrX 15431790 15431914 -151218382 - RMER17A-int LTR ERVK -1522 206 115 5 702 681 13 0 0 chrX 15431914 15431992 -151218304 + (GGAGA)n Simple_repeat Simple_repeat 2 79 0 5 702 519 224 13 145 chrX 15431992 15432102 -151218194 - RMER17A-int LTR ERVK -1614 114 3 5 702 2564 151 41 34 chrX 15432104 15432668 -151217628 - RMER17D2 LTR ERVK 0 809 242 5 702 3282 198 45 67 chrX 15432693 15432917 -151217379 + L1_Mur3 LINE L1 4696 4926 -954 5 702 3999 147 81 0 chrX 15432917 15433599 -151216697 - RMER19A LTR ERVK 0 737 1 5 702 3282 198 45 67 chrX 15433599 15433644 -151216652 + L1_Mur3 LINE L1 4927 4974 -906 5 702 275 49 24 0 chrX 15433644 15433685 -151216611 + (CAA)n Simple_repeat Simple_repeat 1 42 0 5 702 3282 198 45 67 chrX 15433685 15434275 -151216021 + L1_Mur3 LINE L1 4975 5536 -344 5 702 5029 178 37 14 chrX 15435086 15436194 -151214102 - Lx7 LINE L1 -1694 6002 4866 5 702 263 298 22 51 chrX 15436540 15436678 -151213618 + ID2 SINE ID 2 135 -17 5 702 252 59 0 0 chrX 15436682 15436716 -151213580 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 702 18123 96 5 7 chrX 15436718 15440007 -151210289 + L1Md_F2 LINE L1 420 3700 -2183 5 702 25947 80 2 8 chrX 15440008 15445476 -151204820 + L1Md_F2 LINE L1 184 5586 -297 5 702 7765 58 1 9 chrX 15445477 15446478 -151203818 + L1Md_F2 LINE L1 5588 6580 -2 5 702 13926 76 5 0 chrX 15446478 15448364 -151201932 + L1Md_F2 LINE L1 3691 5586 -297 5 702 7964 50 4 0 chrX 15448365 15449355 -151200941 + L1Md_F2 LINE L1 5588 6581 -1 5 702 38 22 0 0 chrX 15450233 15450278 -151200018 + AT_rich Low_complexity Low_complexity 1 45 0 5 702 2459 164 69 9 chrX 15450561 15451044 -151199252 - Lx4B LINE L1 -1140 5918 5402 5 702 2761 241 41 8 chrX 15451039 15451750 -151198546 + Lx2B LINE L1 6215 7056 -2 5 702 681 311 64 53 chrX 15451820 15452085 -151198211 + B4 SINE B4 9 276 -16 5 702 24 32 0 0 chrX 15452161 15452192 -151198104 + AT_rich Low_complexity Low_complexity 1 31 0 5 702 1094 291 43 67 chrX 15452241 15452616 -151197680 - MTE2b LTR MaLR -13 366 1 6 702 3044 79 52 0 chrX 15452928 15453347 -151196949 - L1_Mus1 LINE L1 -312 6255 5815 6 702 306 134 0 0 chrX 15454706 15454773 -151195523 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 6 702 441 282 0 11 chrX 15454970 15455104 -151195192 - L1M2 LINE L1 -1190 4953 4787 6 702 2758 193 22 12 chrX 15455108 15455686 -151194610 + L1_Mur3 LINE L1 4682 5265 -615 6 702 1858 270 52 19 chrX 15455676 15456432 -151193864 + Lx6 LINE L1 6454 7434 -26 6 702 285 29 0 0 chrX 15457318 15457352 -151192944 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 702 2274 71 75 0 chrX 15457450 15457772 -151192524 + ORR1A1 LTR MaLR 1 346 0 6 702 370 257 58 22 chrX 15457806 15457945 -151192351 - L1ME4a LINE L1 -216 5908 5765 6 702 527 338 0 0 chrX 15458684 15458835 -151191461 + B3A SINE B2 3 153 -45 6 702 442 352 32 18 chrX 15459017 15459237 -151191059 - Lx9 LINE L1 -190 7454 7232 6 702 333 269 0 11 chrX 15459235 15459329 -151190967 - Lx8 LINE L1 -661 6812 6720 6 702 311 274 21 10 chrX 15460368 15460464 -151189832 + L1M2 LINE L1 3127 3223 -2920 6 702 7892 113 24 39 chrX 15460464 15461769 -151188527 + Lx3_Mus LINE L1 5717 7001 -8 6 702 713 320 106 21 chrX 15461778 15461987 -151188309 + L1M2 LINE L1 3189 3407 -2473 6 702 341 93 19 0 chrX 15461987 15462041 -151188255 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 702 387 0 0 0 chrX 15462041 15462083 -151188213 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 702 713 320 106 21 chrX 15462083 15462165 -151188131 + L1M2 LINE L1 3408 3512 -2368 6 702 243 0 0 0 chrX 15462165 15462192 -151188104 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 702 891 309 60 18 chrX 15462192 15462662 -151187634 + L1M2 LINE L1 3513 4044 -2099 6 702 1148 189 14 14 chrX 15462760 15462969 -151187327 + B3 SINE B2 8 216 0 6 702 1884 303 143 23 chrX 15462976 15464516 -151185780 + L1M2 LINE L1 4141 5849 -451 6 702 336 323 22 29 chrX 15464518 15464655 -151185641 + B3 SINE B2 81 216 0 6 702 366 307 80 21 chrX 15464665 15464951 -151185345 + L1MD2 LINE L1 6036 6338 -21 6 702 695 251 112 5 chrX 15465077 15465273 -151185023 + ID_B1 SINE B4 5 221 -3 6 702 606 197 0 0 chrX 15465304 15465431 -151184865 + GA-rich Low_complexity Low_complexity 4 130 0 6 702 748 0 22 0 chrX 15465579 15465671 -151184625 + (TCTA)n Simple_repeat Simple_repeat 3 96 0 6 702 231 177 144 77 chrX 15465743 15465847 -151184449 + ORR1D2 LTR MaLR 260 370 0 6 702 532 291 23 6 chrX 15465913 15466086 -151184210 + L1M5 LINE L1 5509 5684 -480 6 87 9421 95 9 33 chrX 15466089 15468377 -151181919 + L1_Mus2 LINE L1 402 2633 -3250 6 703 3447 23 2 0 chrX 15468408 15468803 -151181493 + MTA_Mm LTR MaLR 1 396 0 6 703 222 37 0 0 chrX 15468931 15468958 -151181338 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 6 703 21672 102 11 96 chrX 15468963 15473787 -151176509 - L1Md_F2 LINE L1 -3 6579 2198 6 703 702 135 0 0 chrX 15473791 15473895 -151176401 - U6 snRNA snRNA -3 104 1 6 703 1423 110 0 0 chrX 15473895 15474095 -151176201 + L1_Mus2 LINE L1 2619 2818 -3065 6 703 4835 31 0 0 chrX 15474087 15474711 -151175585 + L1Md_A LINE L1 5541 6164 -418 6 703 458 91 15 0 chrX 15474711 15474777 -151175519 - URR1B DNA MER1_type -7 218 152 6 703 1471 49 0 0 chrX 15474777 15474961 -151175335 + L1Md_A LINE L1 6399 6582 0 6 703 14278 107 14 4 chrX 15474994 15477813 -151172483 + L1_Mus2 LINE L1 3719 6566 0 6 703 21 0 0 0 chrX 15477865 15477886 -151172410 + AT_rich Low_complexity Low_complexity 1 21 0 6 703 570 268 160 24 chrX 15478005 15478664 -151171632 - L1MA4 LINE L1 -345 5967 5143 6 703 238 26 0 49 chrX 15478853 15478894 -151171402 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 703 402 308 11 0 chrX 15479482 15479573 -151170723 - PB1D10 SINE Alu -23 94 3 6 703 37892 46 1 3 chrX 15479954 15486623 -151163673 - L1Md_T LINE L1 0 6585 1 6 703 2151 163 26 12 chrX 15487035 15487451 -151162845 - BGLII_Mus LTR ERVK 0 422 1 6 703 998 82 0 70 chrX 15487872 15488030 -151162266 - B1_Mus1 SINE Alu -1 147 1 6 703 4334 112 58 0 chrX 15488845 15489513 -151160783 + L1_Mus4 LINE L1 5927 6633 -3 6 703 297 0 0 0 chrX 15489521 15489554 -151160742 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 6 703 201 309 0 0 chrX 15489891 15489946 -151160350 + GA-rich Low_complexity Low_complexity 3 57 0 6 703 255 31 0 0 chrX 15490012 15490044 -151160252 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 703 392 0 0 20 chrX 15490318 15490367 -151159929 + (TAA)n Simple_repeat Simple_repeat 1 48 0 6 703 206 62 0 30 chrX 15490431 15490464 -151159832 + (TTAA)n Simple_repeat Simple_repeat 3 34 0 6 703 488 16 0 16 chrX 15490601 15490663 -151159633 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 703 245 218 0 0 chrX 15490744 15490799 -151159497 + Lx2B LINE L1 6923 6977 -23 6 703 340 298 20 69 chrX 15491396 15491497 -151158799 + LTR16B1 LTR ERVL 1 96 -384 6 703 2075 179 142 6 chrX 15493126 15493775 -151156521 - Lx2B LINE L1 -439 5441 4582 6 703 2190 180 65 2 chrX 15493775 15494192 -151156104 + Lx2B LINE L1 5430 5872 -14 6 703 731 198 0 0 chrX 15494195 15494321 -151155975 + Lx2B LINE L1 6200 6325 -675 6 703 716 202 11 21 chrX 15494321 15494508 -151155788 + Lx2B LINE L1 6811 6995 -5 6 703 23 0 0 0 chrX 15494799 15494822 -151155474 + AT_rich Low_complexity Low_complexity 1 23 0 6 703 561 15 0 0 chrX 15495151 15495217 -151155079 + (TG)n Simple_repeat Simple_repeat 2 67 0 6 703 234 360 59 34 chrX 15495353 15495709 -151154587 - L1M4b LINE L1 -1096 5910 5546 6 703 378 0 0 0 chrX 15496254 15496296 -151154000 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 703 279 265 93 22 chrX 15496326 15496465 -151153831 - L1M4b LINE L1 -2157 4849 4701 6 703 444 276 42 79 chrX 15496831 15496996 -151153300 - B3 SINE B2 -9 207 49 6 703 564 53 0 0 chrX 15497129 15497205 -151153091 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 6 703 335 233 98 22 chrX 15497679 15497771 -151152525 - PB1D10 SINE Alu -7 110 12 6 703 314 301 223 5 chrX 15498125 15498322 -151151974 - L1M4b LINE L1 -5106 2228 1989 6 703 234 247 11 90 chrX 15498887 15498976 -151151320 - ID4 SINE ID 0 83 2 6 703 411 294 121 47 chrX 15499380 15499637 -151150659 - L1MC4 LINE L1 -3813 2402 2127 6 703 789 280 60 0 chrX 15499779 15499997 -151150299 - Lx6 LINE L1 -26 7434 7204 6 703 820 270 5 5 chrX 15500000 15500186 -151150110 - Lx6 LINE L1 -259 7201 7016 1 703 296 327 81 14 chrX 15500194 15500492 -151149804 + L1ME3 LINE L1 5499 5826 -336 2 703 234 340 46 20 chrX 15501057 15501210 -151149086 + L1ME3 LINE L1 5895 6051 -111 2 703 304 286 0 21 chrX 15501854 15501947 -151148349 + GA-rich Low_complexity Low_complexity 2 92 0 3 703 1296 232 140 32 chrX 15502188 15502348 -151147948 + MTD LTR MaLR 1 202 -217 4 703 525 13 25 25 chrX 15502348 15502427 -151147869 + (CAAAA)n Simple_repeat Simple_repeat 2 80 0 5 703 1296 232 140 32 chrX 15502427 15502644 -151147652 + MTD LTR MaLR 203 419 0 4 703 279 0 0 0 chrX 15503274 15503305 -151146991 + (A)n Simple_repeat Simple_repeat 1 31 0 6 703 654 13 0 0 chrX 15503308 15503383 -151146913 + (CAAAG)n Simple_repeat Simple_repeat 4 78 0 7 703 2219 206 97 10 chrX 15503564 15504181 -151146115 + MYSERV16_I-int LTR ERVK 1632 2302 -24 8 703 7658 77 0 6 chrX 15504181 15505217 -151145079 - L1Md_F2 LINE L1 -12 6570 5541 9 703 2623 60 0 0 chrX 15505211 15505542 -151144754 + L1_Mm LINE L1 2136 2466 -3417 1 703 1242 191 16 60 chrX 15505565 15505882 -151144414 + RLTR31A_Mm LTR ERVK 1 303 -281 1 703 325 333 37 15 chrX 15506061 15506195 -151144101 + B1F2 SINE Alu 5 141 -8 1 703 388 333 88 55 chrX 15506198 15506379 -151143917 - LTR16A LTR ERVL -264 187 1 1 703 3455 81 9 4 chrX 15506677 15507134 -151143162 + L1Md_F3 LINE L1 5128 5586 -297 1 703 8682 46 1 0 chrX 15507135 15508131 -151142165 + L1Md_F3 LINE L1 5588 6584 0 1 703 897 282 15 8 chrX 15508137 15508401 -151141895 + Lx7 LINE L1 7043 7308 -388 1 703 248 247 158 27 chrX 15508406 15508589 -151141707 + Lx7 LINE L1 7473 7679 -17 1 703 2593 94 0 0 chrX 15508614 15508955 -151141341 - L1_Mus2 LINE L1 -19 5864 5524 1 703 5340 93 3 1 chrX 15508956 15509641 -151140655 + L1_Mus2 LINE L1 5880 6565 -1 1 703 717 67 0 0 chrX 15509964 15510068 -151140228 + (TC)n Simple_repeat Simple_repeat 1 104 0 1 703 198 0 0 0 chrX 15510068 15510089 -151140207 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 703 4741 12 0 0 chrX 15510277 15510770 -151139526 - MT2_Mm LTR ERVL 0 493 1 1 703 322 0 0 0 chrX 15510770 15510808 -151139488 - MERVL-int LTR ERVL 0 5485 5448 1 703 355 191 46 35 chrX 15510808 15510895 -151139401 - ORR1A3-int LTR MaLR -1323 640 553 2 703 41356 16 14 0 chrX 15510895 15516182 -151134114 - MERVL-int LTR ERVL -125 5360 1 1 703 4741 12 0 0 chrX 15516182 15516675 -151133621 - MT2_Mm LTR ERVL 0 493 1 1 703 300 295 258 5 chrX 15517675 15517869 -151132427 - HAL1-3A_ME LINE L1 -617 2241 1999 2 703 1743 157 195 11 chrX 15518213 15518542 -151131754 - RLTR41 LTR ERV1 0 446 50 2 703 3749 15 2 0 chrX 15518542 15518937 -151131359 + MTA_Mm LTR MaLR 1 396 0 2 703 437 192 112 28 chrX 15518937 15518988 -151131308 - RLTR41 LTR ERV1 -397 49 1 2 703 225 193 68 34 chrX 15519022 15519081 -151131215 - B1_Mur4 SINE Alu 0 150 90 2 703 372 335 47 12 chrX 15519444 15519639 -151130657 + MLT1A LTR MaLR 2 195 -213 2 703 235 294 19 38 chrX 15519782 15519888 -151130408 + MTEb LTR MaLR 275 378 -1 2 703 276 30 0 0 chrX 15520538 15520571 -151129725 + (TTA)n Simple_repeat Simple_repeat 3 35 0 2 703 306 171 0 0 chrX 15520568 15520638 -151129658 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 2 703 2096 162 118 5 chrX 15520638 15521054 -151129242 - Lx3C LINE L1 -4 6972 6510 2 703 217 339 0 0 chrX 15521520 15521576 -151128720 + L2b LINE L2 3304 3359 -16 3 703 1276 105 32 0 chrX 15521780 15521970 -151128326 - L1_Mus3 LINE L1 -321 6317 6122 3 703 2204 106 106 0 chrX 15521970 15522281 -151128015 + L1_Mus3 LINE L1 6295 6638 0 3 703 3269 130 40 18 chrX 15522707 15523202 -151127094 - Lx2 LINE L1 0 6997 6492 3 703 297 26 0 26 chrX 15523356 15523395 -151126901 - RMER17D LTR ERVK -300 589 552 3 703 32622 92 3 7 chrX 15523396 15526733 -151123563 + L1Md_F2 LINE L1 68 3485 -2401 3 703 207 0 0 0 chrX 15526733 15526756 -151123540 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3 703 32622 80 2 0 chrX 15526756 15528850 -151121446 + L1Md_F2 LINE L1 3486 5587 -299 3 703 8603 44 2 2 chrX 15528851 15529832 -151120464 + L1Md_F2 LINE L1 5591 6571 -14 3 703 5741 36 4 1 chrX 15529848 15530567 -151119729 + MTA_Mm-int LTR MaLR 378 1098 0 3 703 3611 30 5 0 chrX 15530567 15530961 -151119335 + MTA_Mm LTR MaLR 1 396 0 3 703 348 337 98 44 chrX 15531112 15531295 -151119001 - B4A SINE B4 0 292 100 3 703 325 307 109 27 chrX 15531558 15531742 -151118554 + L1ME3A LINE L1 5954 6152 -21 3 703 383 366 113 4 chrX 15531758 15532005 -151118291 + Lx8 LINE L1 7077 7350 -123 3 703 23 68 0 0 chrX 15532110 15532154 -151118142 + AT_rich Low_complexity Low_complexity 1 44 0 4 703 3539 203 180 4 chrX 15532323 15533103 -151117193 - Lx5 LINE L1 0 7050 6134 4 703 931 306 38 38 chrX 15533173 15533516 -151116780 + ORR1E LTR MaLR 4 346 -13 4 703 955 65 1 0 chrX 15534570 15534694 -151115602 + L1Md_F2 LINE L1 5477 5615 -574 4 703 8526 48 5 2 chrX 15534695 15535687 -151114609 + L1Md_F2 LINE L1 5588 6582 0 4 703 1122 96 7 7 chrX 15536438 15536585 -151113711 + B1_Mus2 SINE Alu 1 147 0 4 703 8018 178 21 6 chrX 15536862 15538547 -151111749 - Lx2 LINE L1 -1 6996 5296 4 703 1178 91 0 7 chrX 15538547 15538691 -151111605 - B1_Mus1 SINE Alu -5 143 1 4 703 6191 206 31 12 chrX 15538691 15539430 -151110866 - Lx2 LINE L1 -591 5295 4532 4 703 1522 168 60 16 chrX 15539424 15539738 -151110558 - Lx2 LINE L1 -1527 4350 4023 4 703 3002 31 0 6 chrX 15539738 15540066 -151110230 + IAPLTR3 LTR ERVK 1 326 0 4 703 61197 21 2 0 chrX 15540066 15546854 -151103442 + IAPLTR3-int LTR ERVK 1 6801 -20 4 703 2967 37 0 0 chrX 15546854 15547180 -151103116 + IAPLTR3 LTR ERVK 1 326 0 4 703 11934 181 70 34 chrX 15547182 15548462 -151101834 - Lx2 LINE L1 -1851 4035 2636 4 703 633 14 0 0 chrX 15548462 15548536 -151101760 + (TG)n Simple_repeat Simple_repeat 1 74 0 4 703 11934 181 70 34 chrX 15548536 15549236 -151101060 - Lx2 LINE L1 -3251 2635 1923 4 703 216 0 0 0 chrX 15549236 15549260 -151101036 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 703 386 0 41 0 chrX 15549268 15549317 -151100979 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 5 703 1154 61 0 0 chrX 15549318 15549449 -151100847 - B1_Mm SINE Alu -12 135 5 5 703 11934 181 70 34 chrX 15549449 15549621 -151100675 - Lx2 LINE L1 -3969 1917 1770 4 703 1132 95 0 0 chrX 15549621 15549768 -151100528 + B1_Mm SINE Alu 1 147 0 5 703 11934 216 26 36 chrX 15549768 15551286 -151099010 - Lx2 LINE L1 -4117 1769 356 4 703 24 0 0 0 chrX 15551619 15551643 -151098653 + AT_rich Low_complexity Low_complexity 1 24 0 5 703 490 381 66 22 chrX 15551816 15552181 -151098115 - LTR16B1 LTR ERVL -99 381 1 5 703 312 365 59 32 chrX 15552308 15552495 -151097801 + MLT1J1 LTR MaLR 252 443 -1 5 703 468 176 40 40 chrX 15552514 15552638 -151097658 + L1ME3B LINE L1 5846 5969 -271 5 703 746 317 19 24 chrX 15553519 15553732 -151096564 - B3 SINE B2 -4 212 1 5 703 44 20 0 0 chrX 15553732 15553783 -151096513 + AT_rich Low_complexity Low_complexity 1 51 0 5 703 264 259 82 31 chrX 15553945 15554140 -151096156 + L1M5 LINE L1 5619 5823 -417 5 703 337 361 62 79 chrX 15554820 15555032 -151095264 + B4A SINE B4 2 202 -90 6 703 1910 202 65 0 chrX 15555032 15555373 -151094923 - ORR1B2 LTR MaLR 0 367 5 6 703 305 361 62 79 chrX 15555373 15555452 -151094844 + B4 SINE B4 203 288 -4 6 703 7356 146 5 30 chrX 15555513 15557752 -151092544 - L1_Mus2 LINE L1 -1 6565 4405 6 703 1362 251 106 24 chrX 15557747 15558449 -151091847 - L1Md_F LINE L1 -5601 936 229 6 703 2124 189 26 0 chrX 15558692 15559074 -151091222 - ORR1B1 LTR MaLR -2 392 1 6 703 364 90 8 112 chrX 15559074 15559199 -151091097 + CT-rich Low_complexity Low_complexity 1 112 0 6 703 901 168 6 6 chrX 15559211 15559391 -151090905 + CT-rich Low_complexity Low_complexity 1 180 0 6 703 819 136 13 13 chrX 15559406 15559563 -151090733 + CT-rich Low_complexity Low_complexity 2 158 0 6 703 1453 77 0 0 chrX 15559563 15559759 -151090537 - L1_Mus1 LINE L1 -1 6566 6371 6 703 213 234 0 0 chrX 15559922 15559986 -151090310 + GA-rich Low_complexity Low_complexity 3 66 0 6 703 189 323 0 44 chrX 15560386 15560454 -151089842 - MIR3 SINE MIR -45 163 99 6 703 183 80 0 0 chrX 15560663 15560688 -151089608 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 703 1372 115 37 0 chrX 15560867 15561085 -151089211 - L1_Mus3 LINE L1 -6 6632 6407 7 703 545 78 39 0 chrX 15561085 15561162 -151089134 + L1_Mus3 LINE L1 6286 6365 -201 7 703 423 0 0 0 chrX 15561222 15561269 -151089027 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 703 333 0 0 0 chrX 15561269 15561305 -151088991 + (TA)n Simple_repeat Simple_repeat 1 37 0 7 703 22 0 0 0 chrX 15561415 15561437 -151088859 + AT_rich Low_complexity Low_complexity 1 22 0 7 703 28 79 0 0 chrX 15561476 15561539 -151088757 + AT_rich Low_complexity Low_complexity 1 63 0 7 703 2219 137 8 15 chrX 15561566 15561960 -151088336 - Lx2 LINE L1 -7 6990 6600 7 703 456 320 100 19 chrX 15561966 15562326 -151087970 + Zaphod DNA Tip100 403 791 -3240 7 703 690 276 127 52 chrX 15562524 15562887 -151087409 + Zaphod DNA Tip100 3623 4012 -19 7 703 728 235 71 5 chrX 15563043 15563240 -151087056 - B3 SINE B2 -3 213 4 7 703 1080 21 21 7 chrX 15563262 15563405 -151086891 + (TTTC)n Simple_repeat Simple_repeat 2 146 0 7 703 758 243 9 61 chrX 15563426 15563654 -151086642 - Lx5 LINE L1 -48 7002 6787 7 703 235 371 57 29 chrX 15563742 15564022 -151086274 - Lx8 LINE L1 -2 7471 7184 8 703 1365 290 22 19 chrX 15564022 15564384 -151085912 + ORR1D2 LTR MaLR 1 363 -7 8 703 800 298 63 23 chrX 15564464 15564906 -151085390 + Lx8 LINE L1 5430 5914 -1782 8 703 729 278 49 41 chrX 15565354 15565620 -151084676 + Lx8 LINE L1 6203 6470 -1003 8 703 1153 230 71 28 chrX 15565618 15565944 -151084352 + Lx8 LINE L1 6600 6939 -534 8 703 909 124 129 12 chrX 15565944 15566107 -151084189 + RLTR20B3 LTR ERVK 396 577 0 8 703 1343 53 6 0 chrX 15566142 15566311 -151083985 + B2_Mm1t SINE B2 11 180 -13 8 703 219 36 0 0 chrX 15566311 15566339 -151083957 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 8 703 913 292 113 46 chrX 15566349 15566765 -151083531 + Lx8 LINE L1 7023 7466 -7 8 703 5770 76 97 13 chrX 15567064 15567916 -151082380 - L1_Mus2 LINE L1 -1 6565 5642 8 703 389 80 0 0 chrX 15567913 15567963 -151082333 + L1_Mus2 LINE L1 5569 5618 -265 8 703 326 270 63 0 chrX 15568037 15568163 -151082133 - Charlie19a DNA Charlie -14 372 239 8 703 198 71 0 0 chrX 15568337 15568365 -151081931 + (CAGAGA)n Simple_repeat Simple_repeat 2 29 0 8 703 501 342 42 10 chrX 15568556 15568748 -151081548 + MLT1D LTR MaLR 18 215 -290 8 703 366 107 0 0 chrX 15568748 15568804 -151081492 + (GGGA)n Simple_repeat Simple_repeat 2 57 0 9 703 283 318 259 15 chrX 15568804 15569005 -151081291 + MLT1D LTR MaLR 181 430 -75 8 703 1025 60 0 0 chrX 15569037 15569170 -151081126 + B1_Mm SINE Alu 6 138 -9 9 703 350 338 23 81 chrX 15569337 15569511 -151080785 + B3A SINE B2 35 198 0 9 703 27 87 0 0 chrX 15569568 15569637 -151080659 + AT_rich Low_complexity Low_complexity 1 69 0 9 703 33 43 0 0 chrX 15569887 15569934 -151080362 + AT_rich Low_complexity Low_complexity 1 47 0 9 703 25 95 0 0 chrX 15570112 15570186 -151080110 + AT_rich Low_complexity Low_complexity 1 74 0 9 703 765 293 9 42 chrX 15570323 15570537 -151079759 + B3 SINE B2 6 212 -4 9 703 228 273 15 0 chrX 15571270 15571336 -151078960 - MTC LTR MaLR 0 419 353 9 703 3259 46 5 0 chrX 15571336 15571730 -151078566 - MTA_Mm LTR MaLR 0 396 1 9 703 4258 87 98 3 chrX 15571730 15572386 -151077910 - MTA_Mm-int LTR MaLR 0 1098 381 9 703 396 71 0 0 chrX 15572386 15572442 -151077854 + (TTA)n Simple_repeat Simple_repeat 2 57 0 9 703 2907 46 19 0 chrX 15572474 15572840 -151077456 - L1Md_F2 LINE L1 -12 6570 6198 1 703 2127 57 0 0 chrX 15572840 15573105 -151077191 + L1Md_F3 LINE L1 5322 5586 -297 1 703 8224 36 8 1 chrX 15573105 15574096 -151076200 + L1Md_F3 LINE L1 5587 6584 0 1 703 216 0 0 0 chrX 15574435 15574459 -151075837 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 1 703 272 326 16 53 chrX 15574529 15574717 -151075579 + L1M5 LINE L1 5693 5873 -251 1 703 3561 53 0 0 chrX 15574738 15575175 -151075121 + L1_Mm LINE L1 5447 5883 0 1 703 2987 70 8 4 chrX 15575197 15575624 -151074672 - MTA_Mm-int LTR MaLR -689 409 1 1 703 3266 48 5 0 chrX 15575624 15576018 -151074278 - MTA_Mm LTR MaLR 0 396 1 1 703 1389 230 41 28 chrX 15576018 15576336 -151073960 - MTC LTR MaLR -61 360 39 9 703 905 245 5 0 chrX 15576973 15577161 -151073135 - Lx5 LINE L1 -3 7047 6859 1 703 342 0 0 0 chrX 15577817 15577855 -151072441 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 703 21 0 0 0 chrX 15578553 15578574 -151071722 + AT_rich Low_complexity Low_complexity 1 21 0 1 703 486 0 0 0 chrX 15579231 15579285 -151071011 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 703 955 343 72 5 chrX 15579338 15579739 -151070557 - Lx8 LINE L1 -449 7024 6597 1 703 314 273 8 0 chrX 15579773 15579901 -151070395 + (TA)n Simple_repeat Simple_repeat 1 129 0 1 703 2296 291 42 39 chrX 15579920 15581123 -151069173 - L1_Mur3 LINE L1 -1435 4445 3239 1 703 682 232 73 11 chrX 15582074 15582253 -151068043 + Lx8 LINE L1 6556 6745 -728 1 703 215 345 51 82 chrX 15582468 15582626 -151067670 - RSINE1 SINE B4 -6 159 7 1 703 350 359 5 14 chrX 15582799 15583008 -151067288 - L1MEc LINE L1 -4259 2763 2557 1 703 480 77 0 0 chrX 15583290 15583355 -151066941 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 703 303 331 118 25 chrX 15583565 15583726 -151066570 - L1MEc LINE L1 -5352 1071 896 1 703 27264 140 6 16 chrX 15583955 15587220 -151063076 + L1_Mus3 LINE L1 1046 4248 -1635 1 703 224 30 30 0 chrX 15587220 15587253 -151063043 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 703 27264 127 5 14 chrX 15587253 15589631 -151060665 + L1_Mus3 LINE L1 4249 6633 -5 1 703 387 0 0 0 chrX 15589648 15589691 -151060605 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 703 9047 109 20 10 chrX 15589702 15591565 -151058731 + Lx3_Mus LINE L1 5106 6987 -22 1 703 285 75 0 0 chrX 15591565 15591605 -151058691 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1 703 7603 155 36 62 chrX 15591607 15593589 -151056707 + Lx3_Mus LINE L1 4521 6498 -511 1 703 198 171 0 0 chrX 15593656 15593697 -151056599 + A-rich Low_complexity Low_complexity 1 41 0 1 703 1326 203 11 36 chrX 15593714 15593805 -151056491 + L1_Rod LINE L1 1314 1397 -4450 1 703 3796 136 125 5 chrX 15593805 15594461 -151055835 + RMER19A LTR ERVK 3 737 0 1 703 1326 203 11 36 chrX 15594461 15594727 -151055569 + L1_Rod LINE L1 1398 1662 -4185 1 703 448 303 97 84 chrX 15594915 15595153 -151055143 + B4 SINE B4 29 269 -23 1 703 219 114 0 0 chrX 15595183 15595218 -151055078 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 703 1470 87 0 19 chrX 15595260 15595472 -151054824 + L1_Mus1 LINE L1 6360 6567 0 1 703 352 243 8 68 chrX 15595546 15595675 -151054621 + L1M LINE L1 5275 5396 -904 1 703 1909 300 83 23 chrX 15595738 15596533 -151053763 + Lx9 LINE L1 6770 7612 -32 1 703 266 286 31 62 chrX 15597155 15597252 -151053044 + MLT1A0 LTR MaLR 21 114 -251 1 703 263 328 98 38 chrX 15597340 15597473 -151052823 + MLT1A0 LTR MaLR 246 386 -22 1 704 339 174 0 0 chrX 15597611 15597697 -151052599 + T-rich Low_complexity Low_complexity 1 86 0 1 704 607 38 0 24 chrX 15597699 15597781 -151052515 - B1_Mm SINE Alu 0 147 68 1 704 2721 16 0 0 chrX 15597781 15598090 -151052206 + L1Md_A LINE L1 5278 5586 -297 1 704 8912 9 0 0 chrX 15598090 15599086 -151051210 + L1Md_A LINE L1 5587 6582 0 1 704 428 108 0 30 chrX 15599090 15599157 -151051139 - B1_Mur4 SINE Alu -85 65 1 1 704 204 40 0 0 chrX 15599176 15599201 -151051095 + (A)n Simple_repeat Simple_repeat 1 25 0 1 704 30 0 0 0 chrX 15599266 15599296 -151051000 + AT_rich Low_complexity Low_complexity 1 30 0 1 704 21 36 0 0 chrX 15599330 15599358 -151050938 + AT_rich Low_complexity Low_complexity 1 28 0 1 704 1874 159 72 8 chrX 15600113 15600474 -151049822 + ORR1C2 LTR MaLR 1 384 0 1 704 1665 184 69 9 chrX 15600626 15600972 -151049324 - ORR1B2 LTR MaLR 0 367 1 1 704 3347 33 2 2 chrX 15601958 15602354 -151047942 + MTA_Mm LTR MaLR 1 396 0 1 704 25 0 0 0 chrX 15602575 15602600 -151047696 + AT_rich Low_complexity Low_complexity 1 25 0 1 704 232 204 0 100 chrX 15602607 15602667 -151047629 - RLTR11B LTR ERVK -366 87 34 1 704 1348 172 16 0 chrX 15602736 15602986 -151047310 + Lx2 LINE L1 6744 6997 0 1 704 1264 233 97 22 chrX 15603083 15603443 -151046853 + Lx8 LINE L1 7062 7448 -25 1 704 4797 89 22 0 chrX 15603818 15604493 -151045803 + L1_Mus3 LINE L1 5945 6634 -4 1 704 899 104 37 0 chrX 15604660 15604794 -151045502 + B1_Mm SINE Alu 1 139 -8 1 704 396 103 0 0 chrX 15604794 15604852 -151045444 + (TAA)n Simple_repeat Simple_repeat 2 59 0 1 704 240 103 0 49 chrX 15604966 15605027 -151045269 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 704 430 316 0 33 chrX 15607060 15607181 -151043115 - PB1D10 SINE Alu 0 117 1 1 704 407 308 0 9 chrX 15607089 15607194 -151043102 - ID_B1 SINE B4 -51 173 70 1 704 1316 243 78 7 chrX 15607209 15607631 -151042665 - Lx9 LINE L1 -8 7636 7185 1 704 258 349 0 30 chrX 15607667 15607800 -151042496 - L1M5 LINE L1 -505 5668 5540 1 704 8371 128 38 12 chrX 15607888 15609459 -151040837 - Lx3A LINE L1 -4 6977 5376 1 704 378 0 0 0 chrX 15609459 15609501 -151040795 + (TATG)n Simple_repeat Simple_repeat 2 43 0 1 704 1022 117 0 0 chrX 15609501 15609646 -151040650 - B1_Mus1 SINE Alu -2 146 2 1 704 4110 129 36 43 chrX 15609646 15609853 -151040443 - Lx3A LINE L1 -511 5375 5189 1 704 401 0 20 0 chrX 15610096 15610145 -151040151 + (CATA)n Simple_repeat Simple_repeat 2 51 0 1 704 307 291 8 120 chrX 15610886 15611003 -151039293 + PB1D10 SINE Alu 14 117 0 1 704 237 244 0 0 chrX 15611092 15611133 -151039163 - B1F2 SINE Alu -106 43 3 1 704 759 72 0 0 chrX 15612407 15612518 -151037778 + (TTTA)n Simple_repeat Simple_repeat 3 113 0 1 704 1161 55 7 0 chrX 15612531 15612677 -151037619 - B1_Mus1 SINE Alu 0 148 2 1 704 22 0 0 0 chrX 15613123 15613145 -151037151 + AT_rich Low_complexity Low_complexity 1 22 0 1 704 7282 119 27 14 chrX 15613226 15614411 -151035885 - Lx3_Mus LINE L1 -4 7005 5805 1 704 827 245 53 10 chrX 15614520 15614726 -151035570 - MTD LTR MaLR -9 410 196 1 704 13475 55 1 2 chrX 15614729 15617131 -151033165 - L1Md_F2 LINE L1 -2 6580 4183 1 704 274 270 29 93 chrX 15617131 15617270 -151033026 - MT2A LTR ERVL -341 192 63 1 704 772 275 0 0 chrX 15617165 15617332 -151032964 - MTD LTR MaLR -220 199 33 1 704 400 324 52 55 chrX 15617638 15617928 -151032368 + L1MC4 LINE L1 6468 6759 -1283 1 704 1918 185 42 3 chrX 15617928 15618281 -151032015 + ORR1B2 LTR MaLR 1 367 0 1 704 400 324 52 55 chrX 15618281 15618372 -151031924 + L1MC4 LINE L1 6760 6848 -1194 1 704 232 280 59 93 chrX 15618382 15618436 -151031860 + L1MC4 LINE L1 6955 6997 -1045 1 704 445 184 143 19 chrX 15618436 15618541 -151031755 + PB1D7 SINE Alu 1 118 -2 1 704 232 280 59 93 chrX 15618541 15618722 -151031574 + L1MC4 LINE L1 6998 7182 -860 1 704 971 358 27 5 chrX 15619084 15619491 -151030805 - Lx8 LINE L1 -121 7352 6937 1 704 559 266 102 0 chrX 15619733 15619861 -151030435 - B3 SINE B2 -75 141 1 1 704 291 291 103 140 chrX 15620110 15620246 -151030050 + RSINE1 SINE B4 4 134 -31 1 704 186 71 0 0 chrX 15620288 15620316 -151029980 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 1 704 12103 83 0 16 chrX 15620980 15623363 -151026933 - L1Md_F2 LINE L1 -10 6572 4227 1 704 312 120 0 0 chrX 15623422 15623472 -151026824 + (TTTA)n Simple_repeat Simple_repeat 1 50 0 1 704 5061 146 7 8 chrX 15623472 15624349 -151025947 - Lx3A LINE L1 -10 6971 6096 1 704 360 0 0 0 chrX 15624536 15624576 -151025720 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 704 1514 245 75 32 chrX 15624609 15625010 -151025286 - Lx6 LINE L1 -851 6609 6192 1 704 4154 146 29 4 chrX 15625012 15625728 -151024568 - Lx2 LINE L1 -1 6996 6263 1 704 331 185 0 0 chrX 15625728 15625793 -151024503 + L1_Mur2 LINE L1 5085 5149 -728 1 704 1303 261 14 6 chrX 15625787 15626205 -151024091 - Lx6 LINE L1 -1492 5968 5547 1 704 1492 218 119 0 chrX 15626195 15626557 -151023739 + L1_Mur3 LINE L1 795 1199 -6513 1 704 1348 282 20 32 chrX 15626550 15626953 -151023343 - Lx6 LINE L1 -7048 680 283 1 704 225 304 0 14 chrX 15627026 15627096 -151023200 + L1MCa LINE L1 297 365 -5680 1 704 323 147 0 29 chrX 15627304 15627374 -151022922 + GA-rich Low_complexity Low_complexity 1 68 0 1 704 373 23 0 0 chrX 15627374 15627417 -151022879 + (GGAGA)n Simple_repeat Simple_repeat 5 47 0 1 704 767 118 11 40 chrX 15627417 15627593 -151022703 + GA-rich Low_complexity Low_complexity 4 174 0 1 704 540 271 74 35 chrX 15627860 15628089 -151022207 + L1MCa LINE L1 1070 1307 -5444 1 704 870 252 144 4 chrX 15628109 15628380 -151021916 + Lx2B LINE L1 6690 6998 -2 1 704 301 276 122 20 chrX 15628559 15628707 -151021589 + L1MCa LINE L1 1584 1746 -4914 1 704 3955 146 52 29 chrX 15628712 15629171 -151021125 - RMER17D LTR ERVK 0 889 432 1 704 378 0 0 0 chrX 15629171 15629213 -151021083 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 704 3955 146 52 29 chrX 15629213 15629593 -151020703 - RMER17D LTR ERVK -458 431 31 1 704 390 298 49 7 chrX 15629741 15629883 -151020413 + B1F SINE Alu 1 148 -1 1 704 240 111 0 0 chrX 15629885 15629930 -151020366 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 704 400 260 120 19 chrX 15630063 15630165 -151020131 + L1MCa LINE L1 4747 4855 -1709 1 704 1423 238 32 22 chrX 15630165 15630535 -151019761 + ORR1C1 LTR MaLR 1 374 -4 1 704 400 260 120 19 chrX 15630535 15630691 -151019605 + L1MCa LINE L1 4856 5030 -1534 1 704 807 315 36 6 chrX 15630706 15631038 -151019258 - ERVL-B4-int LTR ERVL -4326 1388 1047 1 704 204 190 24 37 chrX 15631074 15631156 -151019140 + (TTATA)n Simple_repeat Simple_repeat 2 82 0 1 704 202 258 10 58 chrX 15631375 15631478 -151018818 + GA-rich Low_complexity Low_complexity 5 102 0 1 704 257 294 0 21 chrX 15631478 15631581 -151018715 - MLT2B2 LTR ERVL -46 516 419 1 704 428 256 140 22 chrX 15631623 15631759 -151018537 - MLT2B2 LTR ERVL -404 152 1 1 704 314 360 67 27 chrX 15631772 15631995 -151018301 + L1MC3 LINE L1 5908 6139 -194 1 704 670 293 14 33 chrX 15632016 15632228 -151018068 + B3 SINE B2 1 208 -8 1 704 578 294 74 14 chrX 15632255 15632472 -151017824 + L1MC3 LINE L1 6186 6415 -1370 1 704 835 264 11 23 chrX 15632469 15632733 -151017563 + Lx8 LINE L1 5645 5905 -1568 1 704 711 193 199 0 chrX 15632830 15632996 -151017300 + URR1B DNA MER1_type 1 199 -26 1 704 313 210 86 0 chrX 15633189 15633270 -151017026 + L1MC3 LINE L1 7420 7507 -278 2 704 383 281 0 10 chrX 15633310 15633407 -151016889 + B1F SINE Alu 7 102 -47 2 704 250 306 9 0 chrX 15633451 15633559 -151016737 + L1MC3 LINE L1 7610 7718 -67 2 704 412 245 259 0 chrX 15633585 15633751 -151016545 + Lx4B LINE L1 6819 7027 -31 2 704 208 0 0 59 chrX 15633759 15633793 -151016503 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 2 704 405 333 26 21 chrX 15634343 15634533 -151015763 + ERVL-E-int LTR ERVL 4851 5041 -626 2 704 851 297 85 17 chrX 15634734 15635087 -151015209 - MTEa LTR MaLR -2 377 1 2 704 285 326 65 25 chrX 15635752 15635997 -151014299 - L1M5 LINE L1 -461 5663 5409 2 704 2499 124 36 3 chrX 15637278 15637665 -151012631 + Lx3C LINE L1 6466 6865 -111 2 704 2383 156 36 30 chrX 15637668 15638231 -151012065 + RLTR26 LTR ERVK 1 642 0 2 704 476 206 0 0 chrX 15638237 15638334 -151011962 + Lx3C LINE L1 6879 6975 -1 2 704 510 397 58 36 chrX 15638550 15638999 -151011297 - LTR33 LTR ERVL -7 508 50 2 704 483 107 0 0 chrX 15639075 15639150 -151011146 + (TA)n Simple_repeat Simple_repeat 2 76 0 2 704 416 446 48 32 chrX 15639217 15639532 -151010764 + LTR16B1 LTR ERVL 3 322 -158 2 704 1463 229 36 18 chrX 15639622 15639965 -151010331 - MTD LTR MaLR -9 410 74 2 704 4100 58 2 2 chrX 15640160 15640663 -151009633 + RLTR1C LTR ERV1 1 503 0 2 704 198 235 39 0 chrX 15640679 15640730 -151009566 + MIRc SINE MIR 159 211 -57 2 704 663 93 28 9 chrX 15640876 15640985 -151009311 - Lx LINE L1 -7 6647 6537 2 704 368 274 104 0 chrX 15641531 15641637 -151008659 - PB1D10 SINE Alu 0 117 1 2 704 921 283 134 52 chrX 15642010 15642287 -151008009 + MTD LTR MaLR 35 349 -70 2 704 207 0 0 0 chrX 15642294 15642317 -151007979 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 704 1070 82 0 27 chrX 15642317 15642459 -151007837 - B1_Mm SINE Alu -6 141 2 2 704 921 159 14 55 chrX 15642459 15642532 -151007764 + MTD LTR MaLR 305 405 -14 2 704 225 154 0 0 chrX 15642814 15642853 -151007443 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 704 464 105 13 0 chrX 15642855 15642931 -151007365 + (TG)n Simple_repeat Simple_repeat 1 77 0 2 704 27688 132 15 7 chrX 15643171 15646286 -151004010 - L1_Mus3 LINE L1 -5 6633 3485 2 704 226 0 29 29 chrX 15646286 15646321 -151003975 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 704 27688 132 15 4 chrX 15646321 15648642 -151001654 - L1_Mus3 LINE L1 -2399 3484 1149 2 704 19987 136 8 6 chrX 15648644 15649562 -151000734 + L1_Mus3 LINE L1 2565 3488 -2395 2 704 180 0 0 0 chrX 15649562 15649582 -151000714 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 704 19987 133 9 4 chrX 15649582 15652712 -150997584 + L1_Mus3 LINE L1 3489 6632 -6 2 704 24 32 0 0 chrX 15652809 15652840 -150997456 + AT_rich Low_complexity Low_complexity 1 31 0 2 704 37994 41 0 2 chrX 15652910 15659125 -150991171 - L1Md_T LINE L1 0 6585 290 2 704 31 26 0 0 chrX 15659125 15659163 -150991133 + AT_rich Low_complexity Low_complexity 1 38 0 2 704 1787 283 71 13 chrX 15659235 15660227 -150990069 + L1MC LINE L1 2168 3216 -2930 2 704 474 33 0 0 chrX 15660263 15660323 -150989973 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 704 354 275 10 71 chrX 15660389 15660487 -150989809 + B4A SINE B4 3 94 -198 2 704 655 336 38 40 chrX 15660550 15660947 -150989349 + L1_Mur3 LINE L1 149 544 -7168 2 704 2165 166 29 48 chrX 15660946 15661402 -150988894 + L1_Mur3 LINE L1 4173 4619 -1261 2 704 344 167 14 0 chrX 15661409 15661481 -150988815 + GA-rich Low_complexity Low_complexity 2 74 0 2 704 270 132 0 0 chrX 15661482 15661520 -150988776 + (GGA)n Simple_repeat Simple_repeat 1 38 0 2 704 435 38 0 0 chrX 15661520 15661573 -150988723 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 2 704 543 66 0 0 chrX 15661580 15661656 -150988640 + (GA)n Simple_repeat Simple_repeat 1 76 0 2 704 3090 183 49 62 chrX 15661686 15662477 -150987819 + L1_Mur3 LINE L1 4636 5416 -464 2 704 8867 150 22 11 chrX 15662479 15664594 -150985702 + Lx6 LINE L1 4545 6684 -776 2 704 475 276 45 52 chrX 15664983 15665020 -150985276 - ETnERV2-int LTR ERVK -204 7202 7167 2 704 4280 28 0 0 chrX 15665020 15665513 -150984783 + MT2_Mm LTR ERVL 1 493 0 2 704 475 276 45 52 chrX 15665513 15665609 -150984687 - ETnERV2-int LTR ERVK -240 7166 7070 2 704 2378 247 37 30 chrX 15665613 15666205 -150984091 + Lx6 LINE L1 6686 7281 -179 2 704 268 285 91 14 chrX 15666256 15666466 -150983830 + L1MC LINE L1 3342 3567 -2579 2 704 830 286 14 0 chrX 15666631 15666841 -150983455 + B3 SINE B2 4 216 0 2 704 409 263 45 34 chrX 15666971 15667148 -150983148 + L1MC3 LINE L1 6057 6235 -1550 2 704 350 156 10 50 chrX 15667272 15667373 -150982923 + Lx9 LINE L1 7546 7642 -2 2 704 228 186 0 0 chrX 15667649 15667708 -150982588 + CT-rich Low_complexity Low_complexity 2 60 0 2 704 2477 179 62 4 chrX 15668110 15668638 -150981658 + L1Md_F3 LINE L1 361 919 -5805 2 704 340 0 0 0 chrX 15668637 15668676 -150981620 + L1_Mm LINE L1 5228 5266 -617 2 704 32783 71 9 4 chrX 15668650 15669667 -150980629 + L1Md_F3 LINE L1 1096 2116 -3767 2 704 1792 141 90 94 chrX 15669667 15670144 -150980152 - IAPLTR2_Mm LTR ERVK 0 475 1 2 704 32783 65 5 3 chrX 15670144 15673600 -150976696 + L1Md_F3 LINE L1 2117 5586 -297 2 704 8012 38 11 1 chrX 15673600 15674574 -150975722 + L1Md_F3 LINE L1 5587 6570 -14 2 704 270 23 0 64 chrX 15674597 15674644 -150975652 + B1_Mur4 SINE Alu 107 150 0 2 704 209 57 0 28 chrX 15674648 15674665 -150975631 + (CAAA)n Simple_repeat Simple_repeat 2 18 0 2 704 1018 122 0 0 chrX 15674665 15674813 -150975483 + B1_Mus1 SINE Alu 1 148 0 2 704 209 57 0 28 chrX 15674813 15674831 -150975465 + (CAAA)n Simple_repeat Simple_repeat 3 20 0 2 704 318 360 54 24 chrX 15675526 15675694 -150974602 + LTR16A1 LTR ERVL 275 447 -9 2 704 1164 40 0 13 chrX 15675695 15675847 -150974449 + L1_Mus1 LINE L1 6416 6565 -2 2 704 396 0 0 0 chrX 15675873 15675917 -150974379 + (TAA)n Simple_repeat Simple_repeat 2 45 0 2 704 425 284 25 75 chrX 15676134 15676294 -150974002 + B3A SINE B2 47 198 0 2 704 407 317 0 29 chrX 15676307 15676411 -150973885 + PB1D10 SINE Alu 10 110 -7 2 704 225 278 0 49 chrX 15676919 15677021 -150973275 + A-rich Low_complexity Low_complexity 4 100 0 2 704 21 36 0 0 chrX 15677499 15677527 -150972769 + AT_rich Low_complexity Low_complexity 1 28 0 2 704 604 335 71 23 chrX 15678120 15678386 -150971910 + B4 SINE B4 2 280 -12 2 704 552 42 0 0 chrX 15678446 15678517 -150971779 + (CA)n Simple_repeat Simple_repeat 2 72 0 2 704 216 86 67 33 chrX 15678520 15678580 -150971716 + (CAGA)n Simple_repeat Simple_repeat 2 63 0 2 704 330 286 77 0 chrX 15678590 15678681 -150971615 - PB1D9 SINE Alu -21 99 2 2 704 205 258 15 15 chrX 15678855 15678922 -150971374 + GA-rich Low_complexity Low_complexity 3 69 0 2 704 198 0 0 0 chrX 15679048 15679070 -150971226 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2 704 485 308 91 91 chrX 15679084 15679459 -150970837 + MTEa LTR MaLR 3 377 -2 2 704 531 355 85 44 chrX 15679862 15680133 -150970163 - LTR16A LTR ERVL -165 286 5 2 704 312 292 42 0 chrX 15680584 15680656 -150969640 + B1F1 SINE Alu 9 83 -66 2 704 216 196 0 21 chrX 15680682 15680729 -150969567 + GA-rich Low_complexity Low_complexity 1 46 0 2 704 32823 80 5 6 chrX 15680854 15682692 -150967604 - L1Md_F2 LINE L1 0 6582 4738 2 704 441 0 0 0 chrX 15682692 15682741 -150967555 + (TTTTG)n Simple_repeat Simple_repeat 3 51 0 2 704 32823 93 15 9 chrX 15682741 15687065 -150963231 - L1Md_F2 LINE L1 -1146 4737 399 2 704 306 0 0 0 chrX 15687090 15687124 -150963172 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 704 351 0 0 0 chrX 15687124 15687162 -150963134 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 704 248 350 103 0 chrX 15687163 15687260 -150963036 - B3A SINE B2 -38 160 54 2 704 1539 269 79 7 chrX 15687350 15687780 -150962516 + MER68 LTR ERVL 91 551 -12 2 704 3913 145 17 11 chrX 15687797 15688444 -150961852 - Lx2 LINE L1 0 6997 6347 2 704 2398 202 9 101 chrX 15688460 15689116 -150961180 + L1VL4 LINE L1 239 834 -5468 2 704 1076 123 0 0 chrX 15689116 15689279 -150961017 + B2_Mm2 SINE B2 1 163 -32 2 704 384 57 0 0 chrX 15689279 15689318 -150960978 + (TTC)n Simple_repeat Simple_repeat 1 39 0 2 704 1350 67 0 0 chrX 15689318 15689496 -150960800 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 2 704 384 57 0 0 chrX 15689496 15689509 -150960787 + (TTC)n Simple_repeat Simple_repeat 3 15 0 2 704 14384 128 16 38 chrX 15689510 15692297 -150957999 + L1_Mus4 LINE L1 1174 3709 -2171 2 704 2007 142 3 6 chrX 15692297 15692609 -150957687 - RLTR10E LTR ERVK 0 311 1 2 704 12423 217 15 197 chrX 15692609 15694063 -150956233 + L1_Mus4 LINE L1 3710 4431 -1449 2 704 1066 103 0 0 chrX 15694063 15694209 -150956087 + B1_Mus1 SINE Alu 3 148 0 2 704 12423 184 12 139 chrX 15694209 15695920 -150954376 + L1_Mus4 LINE L1 4432 6096 -540 2 704 310 299 35 0 chrX 15695921 15696008 -150954288 + MLT1A0 LTR MaLR 74 163 -202 2 704 450 0 0 0 chrX 15696208 15696258 -150954038 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 704 235 301 85 98 chrX 15696693 15696929 -150953367 + MER34 LTR ERV1 3 235 -307 2 704 237 296 0 40 chrX 15697066 15697140 -150953156 + PB1D10 SINE Alu 41 111 -6 2 704 240 385 57 41 chrX 15697126 15697248 -150953048 + B4 SINE B4 74 197 -95 2 704 464 308 25 0 chrX 15697148 15697268 -150953028 + B1F SINE Alu 6 128 -21 2 704 227 281 77 10 chrX 15697276 15697380 -150952916 + MER34 LTR ERV1 401 511 -76 2 704 296 243 165 18 chrX 15697466 15697575 -150952721 + 7SK RNA RNA 8 132 -199 2 704 204 290 75 0 chrX 15697707 15697800 -150952496 - MIRb SINE MIR -65 203 104 2 704 929 186 79 19 chrX 15698228 15698442 -150951854 - RMER12 LTR ERVK -56 1266 1040 2 704 2514 106 9 12 chrX 15698450 15698850 -150951446 - RMER12 LTR ERVK -819 585 139 2 704 2024 110 50 9 chrX 15698850 15699172 -150951124 + L1_Mus3 LINE L1 6296 6630 -8 2 704 1944 227 74 94 chrX 15699172 15699368 -150950928 - RMER12 LTR ERVK -1234 170 1 2 704 329 280 64 18 chrX 15699501 15699610 -150950686 - RMER5 LTR ERV1 0 534 421 2 704 512 307 104 27 chrX 15699624 15699845 -150950451 - RMER5 LTR ERV1 -264 270 33 2 704 521 99 0 12 chrX 15699866 15699948 -150950348 + (TTCC)n Simple_repeat Simple_repeat 4 84 0 2 704 435 68 0 0 chrX 15700001 15700060 -150950236 + (TTTC)n Simple_repeat Simple_repeat 4 62 0 2 704 8035 99 11 1 chrX 15700204 15701326 -150948970 + Lx3_Mus LINE L1 5653 6785 -224 2 704 5503 28 2 0 chrX 15701328 15701971 -150948325 + L1Md_T LINE L1 5939 6582 0 2 704 1443 80 38 0 chrX 15701970 15702183 -150948113 + Lx3_Mus LINE L1 6789 7009 0 2 704 360 0 0 0 chrX 15702518 15702558 -150947738 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 2 704 345 362 141 68 chrX 15702590 15702822 -150947474 - MLT1F2 LTR MaLR -97 463 238 3 704 728 181 28 28 chrX 15702822 15702998 -150947298 - B2_Mm2 SINE B2 -18 177 2 3 704 345 362 141 68 chrX 15702998 15703192 -150947104 - MLT1F2 LTR MaLR -323 237 7 3 704 1669 236 20 80 chrX 15703798 15704360 -150945936 + RLTR11A LTR ERVK 1 528 0 3 704 319 254 71 81 chrX 15706273 15706453 -150943843 - LTR48 LTR ERV1 0 787 459 3 704 597 144 40 0 chrX 15706770 15706895 -150943401 + GA-rich Low_complexity Low_complexity 3 132 0 3 704 1118 78 0 0 chrX 15706991 15707132 -150943164 + B1_Mus1 SINE Alu 3 143 -5 3 704 24 0 0 0 chrX 15707225 15707249 -150943047 + AT_rich Low_complexity Low_complexity 1 24 0 3 704 183 129 0 0 chrX 15707249 15707280 -150943016 + (T)n Simple_repeat Simple_repeat 1 31 0 3 704 5254 173 30 28 chrX 15707281 15708320 -150941976 - Lx4A LINE L1 -1 7057 6017 3 704 297 284 67 29 chrX 15708414 15708519 -150941777 - LTR48 LTR ERV1 -596 191 83 3 704 860 150 171 0 chrX 15708566 15708759 -150941537 - URR1A DNA MER1_type 0 226 1 3 704 405 0 0 0 chrX 15710151 15710196 -150940100 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 704 2471 44 0 30 chrX 15710212 15710540 -150939756 + ORR1A0 LTR MaLR 1 318 -28 3 704 810 31 0 0 chrX 15710540 15710637 -150939659 + (TA)n Simple_repeat Simple_repeat 2 98 0 3 704 2520 216 31 78 chrX 15710637 15711271 -150939025 + RLTR26 LTR ERVK 8 612 -30 3 704 837 66 0 0 chrX 15711271 15711392 -150938904 + (TG)n Simple_repeat Simple_repeat 2 122 0 3 704 402 322 90 90 chrX 15711442 15711664 -150938632 - RMER15 LTR ERVL -12 563 342 3 704 531 0 0 0 chrX 15712233 15712292 -150938004 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 704 294 263 0 73 chrX 15712307 15712389 -150937907 - B1F SINE Alu -73 76 1 3 704 223 340 59 49 chrX 15712389 15712426 -150937870 - B4A SINE B4 -212 80 43 3 704 213 311 0 16 chrX 15712687 15712749 -150937547 + ID4_ SINE ID 12 72 -11 3 704 516 323 0 41 chrX 15712921 15712937 -150937359 - RSINE1 SINE B4 0 165 150 3 704 267 79 0 0 chrX 15712937 15712975 -150937321 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 704 516 323 0 41 chrX 15712975 15713129 -150937167 - RSINE1 SINE B4 -16 149 2 3 704 1284 37 0 0 chrX 15713164 15713326 -150936970 + (TAGA)n Simple_repeat Simple_repeat 1 162 0 3 704 416 299 18 56 chrX 15713494 15713778 -150936518 + L1M4 LINE L1 4280 4552 -1594 3 704 387 203 14 0 chrX 15713957 15714031 -150936265 + MTD LTR MaLR 343 417 -2 3 704 379 222 91 0 chrX 15714109 15714227 -150936069 + L1M4 LINE L1 5421 5560 -629 3 704 273 229 64 45 chrX 15714249 15714359 -150935937 + L1M4 LINE L1 5668 5779 -399 3 704 7303 76 38 8 chrX 15714992 15715985 -150934311 - RLTR13D5 LTR ERVK 0 1023 1 3 704 315 0 0 0 chrX 15716562 15716597 -150933699 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 704 255 320 13 0 chrX 15716804 15716882 -150933414 + ID4 SINE ID 3 81 -2 3 704 1660 241 27 5 chrX 15717031 15717402 -150932894 + Lx7 LINE L1 6610 6988 -708 3 704 1363 277 142 19 chrX 15717403 15718301 -150931995 + Lx6 LINE L1 6212 7434 -26 3 704 1003 240 10 131 chrX 15718319 15718728 -150931568 + Lx6 LINE L1 6979 7600 -96 3 704 1280 290 110 24 chrX 15718729 15719220 -150931076 + RMER19A LTR ERVK 1 533 -204 3 704 6807 87 31 3 chrX 15719236 15720648 -150929648 - L1Md_F2 LINE L1 -1 6581 5131 3 704 863 178 6 3 chrX 15720656 15720826 -150929470 + RMER19B LTR ERVK 757 902 0 3 704 437 116 50 59 chrX 15720827 15720928 -150929368 + Lx7 LINE L1 7597 7696 0 3 704 276 100 0 0 chrX 15721156 15721196 -150929100 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 3 704 672 314 73 60 chrX 15721773 15722672 -150927624 + L1M2c LINE L1 1639 2615 -3907 3 704 3522 128 14 17 chrX 15722731 15723313 -150926983 - L1_Mur1 LINE L1 -208 5678 5099 3 704 231 216 59 0 chrX 15723311 15723362 -150926934 + Lx3B LINE L1 6918 6971 -2 3 704 673 335 32 0 chrX 15723401 15723619 -150926677 - MTD LTR MaLR -194 225 1 3 704 351 164 0 0 chrX 15723645 15723700 -150926596 + Lx6 LINE L1 6825 6879 -581 3 704 600 268 69 50 chrX 15723873 15724191 -150926105 + L1M2c LINE L1 3552 3875 -2614 3 704 984 145 19 6 chrX 15724198 15724358 -150925938 - Lx4A LINE L1 -454 6604 6443 3 704 1219 290 108 22 chrX 15724374 15725020 -150925276 + Lx5 LINE L1 3733 4434 -1446 3 704 643 277 30 30 chrX 15725016 15725247 -150925049 + Lx9 LINE L1 5756 5986 -1658 3 704 522 86 0 0 chrX 15725558 15725639 -150924657 + (TG)n Simple_repeat Simple_repeat 1 81 0 3 704 2894 37 11 3 chrX 15725680 15726031 -150924265 - IAPEY2_LTR LTR ERVK -3 354 1 3 704 285 29 0 0 chrX 15726066 15726100 -150924196 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 704 504 0 0 0 chrX 15727070 15727126 -150923170 + (TGGA)n Simple_repeat Simple_repeat 4 59 0 3 704 278 316 122 25 chrX 15727195 15727474 -150922822 + Charlie24 DNA MER1_type 124 429 -2021 3 704 342 333 363 9 chrX 15727668 15728117 -150922179 - L2a LINE L2 -12 3414 2806 3 704 186 171 0 0 chrX 15728133 15728174 -150922122 + CT-rich Low_complexity Low_complexity 4 44 0 3 704 388 358 0 0 chrX 15728182 15728277 -150922019 - PB1D10 SINE Alu -20 97 3 3 704 418 224 130 109 chrX 15728290 15728575 -150921721 + Lx9 LINE L1 7332 7622 -22 3 10 505 295 22 28 chrX 15728635 15728813 -150921483 + Charlie24 DNA MER1_type 738 914 -1536 3 705 282 330 57 0 chrX 15729556 15729644 -150920652 - B1F SINE Alu -28 121 29 3 705 1340 274 94 50 chrX 15729677 15730682 -150919614 - L1MC LINE L1 -2852 3294 2245 3 705 385 355 30 0 chrX 15730697 15730866 -150919430 - Tigger7 DNA MER2_type 0 2491 2318 3 705 1195 307 76 43 chrX 15730863 15731427 -150918869 - Tigger7 DNA MER2_type -1683 808 226 3 705 649 209 0 21 chrX 15731456 15731598 -150918698 + Lx5 LINE L1 5062 5200 -677 3 705 3959 53 0 0 chrX 15731620 15732095 -150918201 - MT2C_Mm LTR ERVL 0 475 1 3 705 314 0 0 0 chrX 15732095 15732133 -150918163 - MERVL-int LTR ERVL 0 5485 5448 3 705 4297 81 38 5 chrX 15732133 15732788 -150917508 - MERVL-int LTR ERVL -1025 4460 3715 3 705 1033 179 28 0 chrX 15732793 15733011 -150917285 + Lx5 LINE L1 5220 5443 -437 3 705 2083 141 30 3 chrX 15733012 15733347 -150916949 + Lx2A LINE L1 6624 6967 -41 3 705 394 179 0 0 chrX 15733348 15733426 -150916870 + Lx2A LINE L1 6924 7001 -7 3 705 2248 197 41 1 chrX 15733452 15734078 -150916218 + Lx5 LINE L1 5442 6111 -939 3 705 884 320 51 12 chrX 15734075 15734584 -150915712 - L1MC4a LINE L1 -60 7822 7294 3 705 1366 243 111 5 chrX 15734586 15734963 -150915333 - MTD LTR MaLR -2 417 1 3 705 598 186 306 4 chrX 15735006 15735267 -150915029 + Lx9 LINE L1 7305 7644 0 3 705 180 323 21 21 chrX 15735803 15735898 -150914398 + MIR SINE MIR 168 262 0 3 705 6414 154 23 31 chrX 15736116 15737790 -150912506 - L1_Mus4 LINE L1 -8 6628 4952 3 705 494 176 40 0 chrX 15737790 15737915 -150912381 + L1_Mus4 LINE L1 6505 6634 -2 3 705 6387 199 16 37 chrX 15737915 15738395 -150911901 - L1_Mus4 LINE L1 -932 4951 4520 3 705 2281 132 33 20 chrX 15738390 15738784 -150911512 - MusHAL1 LINE L1 -855 1857 1459 3 705 874 150 45 45 chrX 15738780 15738982 -150911314 + Lx7 LINE L1 2767 2968 -2912 3 705 6827 176 21 5 chrX 15738984 15740353 -150909943 + Lx7 LINE L1 3218 4608 -1272 3 705 423 0 0 0 chrX 15740353 15740400 -150909896 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 705 326 186 101 50 chrX 15740624 15740743 -150909553 + Lx7 LINE L1 5149 5273 -607 3 705 231 186 111 28 chrX 15740749 15740821 -150909475 + Lx7 LINE L1 5937 6014 -1682 3 705 30815 95 13 2 chrX 15740815 15745748 -150904548 + L1Md_F2 LINE L1 594 5585 -298 3 705 7485 68 8 4 chrX 15745749 15746729 -150903567 + L1Md_F2 LINE L1 5587 6570 -12 3 705 5811 256 28 23 chrX 15746782 15748191 -150902105 + Lx6 LINE L1 6045 7460 0 3 705 1606 26 5 15 chrX 15748535 15748730 -150901566 - B2_Mm1t SINE B2 0 193 1 3 705 310 330 0 45 chrX 15749239 15749350 -150900946 - PB1 SINE Alu -5 122 17 3 705 493 312 43 47 chrX 15749602 15749834 -150900462 + LTR16B1 LTR ERVL 250 480 0 3 705 253 337 23 23 chrX 15749834 15749922 -150900374 + LTR16D2 LTR ERVL 97 184 -467 3 705 363 145 0 0 chrX 15750054 15750137 -150900159 + (TC)n Simple_repeat Simple_repeat 1 83 0 3 705 411 335 99 16 chrX 15750192 15750383 -150899913 + LTR16D2 LTR ERVL 358 564 -8 3 705 6103 134 40 13 chrX 15751379 15752376 -150897920 + Lx2 LINE L1 5973 6996 -1 3 705 2004 215 168 20 chrX 15752382 15753024 -150897272 + RMER19A LTR ERVK 1 737 0 3 705 269 264 19 149 chrX 15753029 15753136 -150897160 - MT2B2 LTR ERVL -449 135 43 3 705 243 265 36 0 chrX 15753293 15753376 -150896920 - L1MD LINE L1 -946 5413 5328 3 705 285 323 0 68 chrX 15753525 15753628 -150896668 - PB1D10 SINE Alu -7 110 15 3 705 230 333 43 0 chrX 15753715 15753784 -150896512 - PB1D10 SINE Alu -6 114 43 3 705 365 304 65 30 chrX 15753786 15753986 -150896310 - L1MD LINE L1 -979 5167 4961 3 705 359 297 30 25 chrX 15754007 15754204 -150896092 - L1MD LINE L1 -1428 4718 4521 3 705 452 114 13 0 chrX 15754499 15754578 -150895718 - Lx2 LINE L1 0 6997 6918 3 705 528 250 19 19 chrX 15754578 15754733 -150895563 + Lx4B LINE L1 6902 7056 -2 3 705 1835 208 3 3 chrX 15754781 15755143 -150895153 + L1Md_F2 LINE L1 164 525 -6091 3 705 28544 98 9 7 chrX 15755137 15759399 -150890897 + L1Md_F2 LINE L1 1312 5585 -298 3 705 7068 95 6 5 chrX 15759400 15760395 -150889901 + L1Md_F2 LINE L1 5587 6582 0 3 705 7079 157 27 25 chrX 15760570 15762731 -150887565 + L1_Mus3 LINE L1 4470 6631 -7 3 705 351 125 0 0 chrX 15762742 15762798 -150887498 + L1_Mur2 LINE L1 5283 5338 -539 3 705 4258 211 45 4 chrX 15762796 15763847 -150886449 - Lx7 LINE L1 -1747 5949 4858 3 705 27 0 0 0 chrX 15763897 15763924 -150886372 + AT_rich Low_complexity Low_complexity 1 27 0 3 705 360 231 21 21 chrX 15763926 15764019 -150886277 - ORR1D1 LTR MaLR -5 374 282 3 705 1697 198 58 6 chrX 15764323 15764683 -150885613 - Lx2 LINE L1 0 6997 6619 3 705 998 197 26 18 chrX 15764817 15765044 -150885252 + Lx4B LINE L1 6808 7036 -22 3 705 333 0 0 0 chrX 15765044 15765081 -150885215 + (TTAA)n Simple_repeat Simple_repeat 1 37 0 3 705 33008 63 19 1 chrX 15765133 15770045 -150880251 + L1Md_F3 LINE L1 425 5588 -298 3 705 7934 47 8 4 chrX 15770046 15771040 -150879256 + L1Md_F3 LINE L1 5590 6587 0 3 705 28 61 0 0 chrX 15771054 15771103 -150879193 + AT_rich Low_complexity Low_complexity 1 49 0 3 705 25 0 0 0 chrX 15771231 15771256 -150879040 + AT_rich Low_complexity Low_complexity 1 25 0 3 705 230 258 29 57 chrX 15771427 15771497 -150878799 - ID4 SINE ID -14 69 2 3 705 596 289 46 23 chrX 15771551 15771767 -150878529 + Lx8 LINE L1 6291 6511 -962 3 705 332 267 51 70 chrX 15771800 15771864 -150878432 + L1MC3 LINE L1 7126 7185 -600 3 705 3632 173 19 5 chrX 15771864 15772509 -150877787 - Lx2B LINE L1 0 7000 6347 3 705 332 267 51 70 chrX 15772509 15772601 -150877695 + L1MC3 LINE L1 7186 7279 -506 3 705 740 294 87 17 chrX 15772660 15772947 -150877349 - ORR1D1 LTR MaLR -67 307 1 3 705 275 279 13 0 chrX 15772949 15773028 -150877268 + L1MA10 LINE L1 6240 6319 -15 3 705 346 322 157 61 chrX 15773127 15773490 -150876806 + Tigger9a DNA Tigger 311 708 -24 4 705 192 345 107 16 chrX 15773965 15774086 -150876210 - MIRc SINE MIR -1 267 136 4 705 2851 300 68 31 chrX 15774295 15775196 -150875100 - Lx8 LINE L1 -354 7119 6176 4 705 1340 219 50 17 chrX 15775196 15775558 -150874738 + ORR1D1 LTR MaLR 1 374 0 4 705 2851 300 68 31 chrX 15775558 15775664 -150874632 - Lx8 LINE L1 -1298 6175 6074 4 705 240 279 24 48 chrX 15775753 15775836 -150874460 - RSINE1 SINE B4 -2 163 83 4 705 1402 216 102 54 chrX 15775858 15776230 -150874066 - MTB_Mm LTR MaLR -12 395 6 4 705 591 333 23 63 chrX 15776231 15776452 -150873844 - B4 SINE B4 -80 212 1 4 705 552 310 35 10 chrX 15776505 15776704 -150873592 - B3 SINE B2 -12 204 1 4 705 648 229 16 57 chrX 15776756 15776950 -150873346 - B2_Mm2 SINE B2 -8 187 2 4 705 29 0 0 0 chrX 15777520 15777549 -150872747 + AT_rich Low_complexity Low_complexity 1 29 0 4 705 541 255 133 0 chrX 15777629 15777825 -150872471 - URR1A DNA MER1_type 0 226 5 4 705 405 0 0 0 chrX 15778400 15778445 -150871851 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 705 902 182 47 0 chrX 15778445 15778615 -150871681 - RLTR45 LTR ERVK 0 482 305 4 705 648 76 32 11 chrX 15778612 15778705 -150871591 - RLTR45 LTR ERVK -387 95 1 4 705 6999 65 3 2 chrX 15778708 15779634 -150870662 - RLTR45-int LTR ERVK -456 7761 6331 4 705 261 0 0 0 chrX 15779634 15779663 -150870633 + (TC)n Simple_repeat Simple_repeat 2 30 0 4 705 803 308 56 11 chrX 15779663 15779860 -150870436 - RLTR45-int LTR ERVK -634 7583 7389 4 705 2567 55 0 0 chrX 15780202 15780529 -150869767 - RLTR45-int LTR ERVK -5599 1645 1319 4 705 750 118 0 0 chrX 15781162 15781281 -150869015 - RLTR45-int LTR ERVK -6213 1031 913 4 705 1593 78 0 5 chrX 15781404 15781624 -150868672 - RLTR45-int LTR ERVK -6334 910 692 4 705 1077 35 0 40 chrX 15781980 15782130 -150868166 - RLTR45-int LTR ERVK -6552 692 549 4 705 3629 85 52 20 chrX 15782903 15783456 -150866840 - RLTR45-int LTR ERVK -6673 571 1 4 705 2471 153 39 41 chrX 15783456 15783939 -150866357 - RLTR45 LTR ERVK 0 482 1 4 705 264 59 0 0 chrX 15783939 15783973 -150866323 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 705 583 307 69 24 chrX 15783982 15784229 -150866067 - MER2 DNA MER2_type -1 344 87 4 705 384 158 0 0 chrX 15784371 15784447 -150865849 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 4 705 332 266 21 105 chrX 15784479 15784622 -150865674 - Lx9 LINE L1 -262 7382 7252 4 705 6168 137 9 2 chrX 15784701 15785737 -150864559 - Lx2 LINE L1 -2 6995 5953 4 705 551 276 27 20 chrX 15785770 15785918 -150864378 + RLTR26 LTR ERVK 494 642 0 4 705 4312 179 53 6 chrX 15785918 15786831 -150863465 - L1_Mm LINE L1 -116 5767 4812 4 705 254 193 0 0 chrX 15787202 15787259 -150863037 + L1M3 LINE L1 4626 4682 -1458 4 705 22 35 0 0 chrX 15787324 15787353 -150862943 + AT_rich Low_complexity Low_complexity 1 29 0 4 705 500 289 7 7 chrX 15787356 15787506 -150862790 - Lx6 LINE L1 -103 7357 7208 4 705 34763 34 1 7 chrX 15787508 15792692 -150857604 + L1Md_A LINE L1 441 5586 -297 4 705 8257 41 1 0 chrX 15792692 15793686 -150856610 + L1Md_A LINE L1 5587 6581 -1 4 705 2759 241 42 25 chrX 15793691 15794033 -150856263 - Lx6 LINE L1 -237 7223 6889 4 705 683 54 11 0 chrX 15794033 15794125 -150856171 + (TC)n Simple_repeat Simple_repeat 2 94 0 4 705 2759 241 42 25 chrX 15794125 15794490 -150855806 - Lx6 LINE L1 -572 6888 6504 4 705 316 106 45 0 chrX 15794491 15794557 -150855739 + T-rich Low_complexity Low_complexity 2 70 0 4 705 18430 149 12 40 chrX 15794612 15795759 -150854537 + L1_Mm LINE L1 1792 2931 -2952 4 705 5474 38 12 0 chrX 15795759 15796424 -150853872 + L1Md_A LINE L1 5908 6580 -2 4 705 18430 149 12 40 chrX 15796424 15799042 -150851254 + L1_Mm LINE L1 2932 5451 -432 4 705 2747 109 22 0 chrX 15799043 15799445 -150850851 + L1_Mus3 LINE L1 6222 6632 -6 4 705 246 319 0 0 chrX 15799693 15799762 -150850534 + (CA)n Simple_repeat Simple_repeat 1 69 0 4 705 1310 282 48 14 chrX 15799930 15800282 -150850014 - MTE2a LTR MaLR -15 364 1 4 705 953 346 70 21 chrX 15800283 15800756 -150849540 - MER89 LTR ERV1 -19 540 45 4 705 765 198 272 20 chrX 15801521 15802000 -150848296 + L1_Rod LINE L1 1042 1639 -4208 4 705 226 307 53 0 chrX 15802042 15802117 -150848179 - PB1D9 SINE Alu -36 84 6 4 705 649 174 0 0 chrX 15802321 15802430 -150847866 + RMER19B LTR ERVK 1 109 -793 4 705 334 233 38 28 chrX 15802870 15802976 -150847320 - L1MD LINE L1 -660 5699 5593 4 705 662 234 209 7 chrX 15803091 15803397 -150846899 - Lx9 LINE L1 -81 7563 7196 4 705 32526 71 10 7 chrX 15803434 15809494 -150840802 - L1Md_F2 LINE L1 -11 6571 489 4 705 324 218 13 13 chrX 15809496 15809575 -150840721 - Lx9 LINE L1 -437 7207 7129 4 705 184 111 44 0 chrX 15809593 15809638 -150840658 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 705 315 347 116 14 chrX 15809793 15809939 -150840357 + B3 SINE B2 51 211 -5 4 705 257 197 32 16 chrX 15809967 15810029 -150840267 - L1MDb LINE L1 -5107 1302 1240 4 705 464 297 7 20 chrX 15810134 15810285 -150840011 - ORR1D1 LTR MaLR -1 373 225 4 705 2298 191 19 45 chrX 15811060 15811587 -150838709 - L1VL1 LINE L1 -5674 748 236 4 705 924 180 5 14 chrX 15811597 15811632 -150838664 - L1_Mur1 LINE L1 -2211 3675 3642 4 705 435 19 0 0 chrX 15811632 15811684 -150838612 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 705 924 180 5 14 chrX 15811684 15811862 -150838434 - L1_Mur1 LINE L1 -2245 3641 3464 4 705 5347 122 39 23 chrX 15811860 15812876 -150837420 + L1_Mur1 LINE L1 2450 3482 -2404 4 705 412 106 0 0 chrX 15812873 15812939 -150837357 - L1_Mur2 LINE L1 -1964 3913 3848 4 705 1440 249 83 19 chrX 15812940 15813506 -150836790 - Charlie2b DNA MER1_type -43 2739 2138 4 705 384 346 40 62 chrX 15813580 15813805 -150836491 - Charlie2b DNA MER1_type -2548 234 15 4 705 249 306 27 40 chrX 15813942 15814017 -150836279 + ID SINE ID 2 75 -149 4 705 342 0 0 0 chrX 15814024 15814062 -150836234 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 4 705 452 311 41 16 chrX 15814089 15814210 -150836086 + B4 SINE B4 85 208 -84 4 705 22 35 0 0 chrX 15814233 15814262 -150836034 + AT_rich Low_complexity Low_complexity 1 29 0 4 705 262 292 46 0 chrX 15814284 15814349 -150835947 + B4 SINE B4 222 289 -3 4 705 394 319 49 35 chrX 15814850 15814863 -150835433 + B1F2 SINE Alu 1 143 -4 4 705 482 307 8 8 chrX 15814863 15814991 -150835305 + ID_B1 SINE B4 91 218 -6 4 705 414 0 0 0 chrX 15815165 15815211 -150835085 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 705 313 256 0 32 chrX 15815359 15815452 -150834844 - MER34-int LTR ERV1 -10 8197 8108 4 705 237 391 51 17 chrX 15816818 15816935 -150833361 - PB1 SINE Alu -2 125 5 4 705 983 296 55 55 chrX 15817046 15817389 -150832907 - ORR1E LTR MaLR -13 346 4 4 705 3304 197 181 5 chrX 15817459 15818239 -150832057 + Lx5 LINE L1 6134 7050 0 4 705 23 68 0 0 chrX 15818408 15818452 -150831844 + AT_rich Low_complexity Low_complexity 1 44 0 4 705 317 340 147 0 chrX 15818613 15818804 -150831492 - Lx8 LINE L1 -178 7295 7077 4 705 336 307 109 27 chrX 15818820 15819004 -150831292 - L1ME3A LINE L1 -21 6152 5954 4 705 407 331 99 39 chrX 15819268 15819450 -150830846 + B4A SINE B4 100 292 0 4 705 3505 15 2 0 chrX 15819611 15820006 -150830290 - MTA_Mm LTR MaLR 0 396 1 4 705 1681 165 7 7 chrX 15820060 15820335 -150829961 + RLTR41 LTR ERV1 172 446 0 4 705 2804 103 2 36 chrX 15820524 15820945 -150829351 + MTB_Mm LTR MaLR 1 407 0 4 705 269 278 298 14 chrX 15821174 15821389 -150828907 - MTEb LTR MaLR -102 277 2 4 705 513 0 0 0 chrX 15822504 15822561 -150827735 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 705 341 93 19 0 chrX 15822561 15822614 -150827682 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 705 666 316 122 12 chrX 15822638 15822891 -150827405 + B4A SINE B4 2 282 -10 4 705 405 0 0 0 chrX 15822908 15822953 -150827343 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 705 18804 175 11 5 chrX 15823858 15828787 -150821509 + Lx LINE L1 372 5334 -552 4 705 5230 168 29 5 chrX 15828791 15829771 -150820525 + Lx LINE L1 5646 6648 -6 4 705 439 323 76 9 chrX 15829818 15830043 -150820253 + Lx6 LINE L1 7044 7283 -177 4 705 1203 122 32 5 chrX 15830060 15830250 -150820046 - B2_Mm2 SINE B2 0 195 1 4 705 1009 96 0 0 chrX 15830258 15830393 -150819903 + B1_Mus1 SINE Alu 6 140 -8 4 705 816 123 0 0 chrX 15830396 15830542 -150819754 + (GAA)n Simple_repeat Simple_repeat 3 148 0 4 705 3131 218 103 42 chrX 15830717 15831609 -150818687 - RMER17B LTR ERVK -11 947 1 4 705 2100 95 3 3 chrX 15831685 15831981 -150818315 + L1Md_F2 LINE L1 6282 6577 -5 4 705 238 311 0 39 chrX 15832019 15832096 -150818200 + MIR SINE MIR 57 130 -78 4 705 259 313 23 28 chrX 15832268 15832386 -150817910 - MLT1J2 LTR MaLR -26 422 279 4 705 1088 158 119 0 chrX 15832389 15832591 -150817705 + URR1A DNA MER1_type 1 226 0 4 705 465 307 142 5 chrX 15833263 15833453 -150816843 + B4A SINE B4 1 216 -76 4 705 220 241 17 0 chrX 15833456 15833514 -150816782 + (CATATA)n Simple_repeat Simple_repeat 4 62 0 4 705 2930 69 2 10 chrX 15834076 15834470 -150815826 + MTA_Mm LTR MaLR 1 391 -5 4 705 284 361 25 0 chrX 15834472 15834594 -150815702 + MIRb SINE MIR 144 268 0 4 705 333 320 63 91 chrX 15835485 15835766 -150814530 + L1VL1 LINE L1 4 437 -5981 4 705 25806 126 35 9 chrX 15835819 15841560 -150808736 + L1_Mus2 LINE L1 676 6566 0 4 705 552 15 0 0 chrX 15841635 15841700 -150808596 + (TG)n Simple_repeat Simple_repeat 1 65 0 4 705 216 0 0 0 chrX 15841749 15841773 -150808523 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 705 422 120 13 0 chrX 15842377 15842452 -150807844 + (CTG)n Simple_repeat Simple_repeat 2 77 0 4 705 342 303 43 94 chrX 15843162 15843192 -150807104 + CYRA11_Mm Unknown Y-chromosome 147 164 -453 4 705 946 213 45 27 chrX 15843192 15843414 -150806882 - URR1A DNA MER1_type 0 226 1 4 705 4044 192 31 2 chrX 15843414 15844245 -150806051 + Lx2B LINE L1 6146 7000 0 4 705 638 261 10 30 chrX 15844360 15844561 -150805735 - Lx8 LINE L1 -986 6487 6291 4 705 217 269 19 0 chrX 15844634 15844686 -150805610 + ID2 SINE ID 17 69 -14 4 705 941 234 25 8 chrX 15845096 15845337 -150804959 - Lx4B LINE L1 -2 7056 6812 4 705 1442 209 61 3 chrX 15845465 15845810 -150804486 + Lx2 LINE L1 6619 6983 -14 4 705 2531 51 3 6 chrX 15845913 15846248 -150804048 + L1Md_F2 LINE L1 5253 5586 -297 4 705 7345 68 25 3 chrX 15846249 15847211 -150803085 + L1Md_F2 LINE L1 5588 6570 -12 4 705 323 244 33 0 chrX 15847400 15847490 -150802806 + ORR1D1 LTR MaLR 278 370 -4 4 705 4100 193 50 8 chrX 15847572 15848607 -150801689 + Lx LINE L1 4858 5952 -1744 5 705 333 125 0 0 chrX 15848602 15848658 -150801638 - L1_Mur2 LINE L1 -539 5338 5283 5 705 6543 164 23 28 chrX 15848672 15850550 -150799746 - L1_Mus3 LINE L1 -6 6632 4767 5 705 1952 211 7 5 chrX 15850553 15850973 -150799323 + Lx LINE L1 6225 6645 -9 5 705 559 331 55 91 chrX 15851163 15851492 -150798804 + ORR1E LTR MaLR 39 355 -4 5 705 321 296 153 29 chrX 15851863 15852045 -150798251 + L1MEc LINE L1 541 749 -5651 5 705 378 265 57 64 chrX 15852045 15852202 -150798094 + RSINE1 SINE B4 3 158 -7 5 705 321 296 153 29 chrX 15852202 15852228 -150798068 + L1MEc LINE L1 750 775 -5625 5 705 388 268 21 0 chrX 15852269 15852366 -150797930 - PB1D9 SINE Alu -5 115 17 5 705 551 233 33 16 chrX 15853037 15853159 -150797137 - MT2A LTR ERVL -409 124 1 5 705 1360 217 63 34 chrX 15853159 15853574 -150796722 + L1MA6 LINE L1 5454 5937 -363 5 705 281 328 112 60 chrX 15854603 15854853 -150795443 - MLT1C LTR MaLR -149 318 56 5 705 541 303 74 37 chrX 15855114 15855403 -150794893 - MLT2B4 LTR ERVL -75 445 161 5 705 1042 254 24 20 chrX 15855450 15855744 -150794552 - Lx6 LINE L1 -29 7431 7137 5 705 369 0 0 0 chrX 15855767 15855808 -150794488 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 705 183 80 0 0 chrX 15855927 15855952 -150794344 + (CATATA)n Simple_repeat Simple_repeat 2 26 0 5 705 767 301 4 4 chrX 15855996 15856226 -150794070 - Lx5 LINE L1 -360 6690 6461 5 705 829 222 0 0 chrX 15856265 15856409 -150793887 - URR1B DNA MER1_type -79 146 3 5 705 490 283 59 0 chrX 15856409 15856560 -150793736 - MLT2B4 LTR ERVL -396 160 1 5 705 1145 76 0 0 chrX 15856868 15857012 -150793284 + B1_Mus2 SINE Alu 2 145 -2 5 705 248 70 0 23 chrX 15857385 15857429 -150792867 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 5 705 180 0 0 0 chrX 15857962 15857982 -150792314 + (TGGGGG)n Simple_repeat Simple_repeat 4 23 0 5 705 198 241 68 17 chrX 15858175 15858234 -150792062 + MIRb SINE MIR 199 260 -8 5 705 706 265 19 142 chrX 15858585 15858796 -150791500 - ID_B1 SINE B4 0 224 40 5 705 233 329 82 101 chrX 15858852 15859011 -150791285 + B4A SINE B4 1 156 -136 5 705 372 104 0 0 chrX 15859040 15859107 -150791189 + (A)n Simple_repeat Simple_repeat 1 67 0 5 88 7709 73 16 10 chrX 15859114 15860131 -150790165 + RLTR13D5 LTR ERVK 1 1023 0 5 706 186 43 0 0 chrX 15860222 15860245 -150790051 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 706 432 0 0 0 chrX 15860245 15860292 -150790004 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 706 387 0 0 0 chrX 15860380 15860423 -150789873 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 706 1360 162 18 0 chrX 15860423 15860695 -150789601 + L1_Mur3 LINE L1 1753 2029 -3851 5 706 304 220 46 0 chrX 15860709 15860818 -150789478 + L1_Mur3 LINE L1 2371 2484 -3396 5 706 4783 164 41 2 chrX 15860802 15861722 -150788574 + Lx4B LINE L1 5589 6515 -543 5 706 1140 237 27 55 chrX 15861715 15862045 -150788251 + Lx6 LINE L1 7136 7456 -4 5 706 201 39 0 0 chrX 15862081 15862107 -150788189 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 706 488 196 74 0 chrX 15862403 15862525 -150787771 - B1_Mur1 SINE Alu 0 149 3 5 706 311 380 127 28 chrX 15863242 15863494 -150786802 - LTR16E2 LTR ERVL -17 551 275 5 706 276 301 8 74 chrX 15863890 15864012 -150786284 + MLT1C LTR MaLR 1 114 -353 5 706 552 321 175 9 chrX 15864066 15864289 -150786007 + B4A SINE B4 6 265 -27 5 706 928 166 0 52 chrX 15864399 15864590 -150785706 + RMER17C LTR ERVK 1 181 -229 5 706 267 31 0 0 chrX 15864590 15864622 -150785674 + (TCC)n Simple_repeat Simple_repeat 1 32 0 5 706 537 252 12 98 chrX 15864622 15864691 -150785605 + RMER17C LTR ERVK 401 456 -502 5 706 1252 191 244 108 chrX 15864696 15865288 -150785008 + RMER17C-int LTR ERVK 33 705 -2533 5 706 420 20 0 0 chrX 15865366 15865415 -150784881 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 706 381 22 0 0 chrX 15865888 15865934 -150784362 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 706 417 39 0 0 chrX 15865992 15866043 -150784253 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 706 302 117 100 0 chrX 15866044 15866104 -150784192 + RMER17C-int LTR ERVK 1390 1455 -1783 5 706 895 159 55 49 chrX 15866107 15866453 -150783843 + RMER17C-int LTR ERVK 2282 2537 -701 5 706 247 216 0 19 chrX 15866454 15866506 -150783790 - LSU-rRNA_Hsa rRNA rRNA -788 4247 4197 5 706 1017 238 5 56 chrX 15866517 15866873 -150783423 + L1_Mur1 LINE L1 3 316 -6668 5 706 13187 99 20 27 chrX 15866881 15868825 -150781471 + L1_Mur1 LINE L1 1469 3429 -2457 5 706 1924 22 0 4 chrX 15868825 15869053 -150781243 + L1Md_F3 LINE L1 6344 6570 -14 5 706 13187 99 20 27 chrX 15869053 15869343 -150780953 + L1_Mur1 LINE L1 3430 3687 -2199 5 706 3979 162 95 55 chrX 15869343 15869868 -150780428 + RLTR13D3 LTR ERVK 1 545 -569 5 706 1185 55 7 0 chrX 15869868 15870014 -150780282 + B1_Mm SINE Alu 1 147 0 5 706 3979 162 95 55 chrX 15870014 15870311 -150779985 + RLTR13D3 LTR ERVK 546 856 -258 5 706 38600 17 0 6 chrX 15870311 15876481 -150773815 - L1Md_A LINE L1 -4 6578 452 5 706 1431 163 4 45 chrX 15876481 15876745 -150773551 + RLTR13D2 LTR ERVK 771 1023 0 5 706 11640 96 28 4 chrX 15876745 15878583 -150771713 + L1_Mur1 LINE L1 3682 5562 -324 5 706 1996 133 7 0 chrX 15878583 15878884 -150771412 - MTB LTR MaLR 0 400 98 5 706 2100 161 0 17 chrX 15878884 15879245 -150771051 + RMER17C-int LTR ERVK 2884 3238 0 5 706 1243 175 52 104 chrX 15879245 15879666 -150770630 + RMER17C LTR ERVK 1 399 -11 5 706 3668 71 0 10 chrX 15879712 15880198 -150770098 - L1Md_F2 LINE L1 0 6582 6102 5 706 11847 36 2 0 chrX 15880199 15881913 -150768383 + L1Md_T LINE L1 4405 6120 -462 5 706 358 305 21 86 chrX 15882428 15882568 -150767728 + B1F SINE Alu 18 148 -1 5 706 327 49 0 0 chrX 15882611 15882652 -150767644 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 706 31881 76 5 12 chrX 15882950 15888269 -150762027 + L1Md_F2 LINE L1 307 5586 -297 5 706 7939 55 2 0 chrX 15888269 15889251 -150761045 + L1Md_F2 LINE L1 5587 6570 -12 5 706 619 260 82 16 chrX 15889575 15889892 -150760404 - L1_Mm LINE L1 -1230 4653 4316 5 706 4058 85 45 35 chrX 15889911 15890508 -150759788 + L1_Mus2 LINE L1 5963 6565 -1 5 706 189 283 0 0 chrX 15891878 15891931 -150758365 + MIRm SINE MIR 222 274 -2 5 706 299 113 0 19 chrX 15892160 15892214 -150758082 + (TCTCCC)n Simple_repeat Simple_repeat 6 58 0 5 706 305 312 75 45 chrX 15892214 15892348 -150757948 + HAL1-3A_ME LINE L1 1981 2118 -740 5 706 700 265 9 85 chrX 15892706 15893043 -150757253 + L1VL1 LINE L1 4 485 -5933 5 706 23089 139 72 10 chrX 15893046 15898895 -150751401 + L1_Mus2 LINE L1 332 6564 -2 5 706 31427 91 12 7 chrX 15899147 15905276 -150745020 - L1Md_F2 LINE L1 -2 6580 446 5 706 30 0 0 0 chrX 15905971 15906001 -150744295 + AT_rich Low_complexity Low_complexity 1 30 0 5 706 336 200 0 0 chrX 15906264 15906319 -150743977 + B1_Mus2 SINE Alu 1 55 -92 5 706 752 138 8 0 chrX 15906327 15906457 -150743839 + (GA)n Simple_repeat Simple_repeat 2 132 0 5 706 470 364 96 100 chrX 15907332 15907588 -150742708 - LTR16D1 LTR ERVL -65 610 385 5 706 4044 59 2 4 chrX 15907588 15908100 -150742196 - L1Md_F2 LINE L1 -2 6580 6070 5 706 470 364 96 100 chrX 15908100 15908435 -150741861 - LTR16D1 LTR ERVL -291 384 21 5 706 369 190 25 25 chrX 15908444 15908517 -150741779 + PB1D9 SINE Alu 40 114 -6 5 706 483 63 0 0 chrX 15908517 15908580 -150741716 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 5 706 207 0 0 0 chrX 15908897 15908920 -150741376 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 706 1863 320 49 18 chrX 15909108 15909898 -150740398 - Lx8 LINE L1 -226 7247 6433 5 706 3856 161 19 25 chrX 15909922 15910918 -150739378 + Lx2 LINE L1 5129 6131 -866 5 706 2087 93 9 18 chrX 15910913 15911252 -150739044 + Lx2 LINE L1 6311 6646 -8 5 706 28 0 0 0 chrX 15911252 15911280 -150739016 + AT_rich Low_complexity Low_complexity 1 28 0 5 706 627 219 22 0 chrX 15911280 15911417 -150738879 - Lx8 LINE L1 -1053 6420 6281 5 706 2257 198 5 30 chrX 15911418 15911738 -150738558 - MTC LTR MaLR 0 421 111 5 706 1023 197 56 5 chrX 15911738 15911952 -150738344 - URR1B DNA MER1_type 0 225 1 5 706 2257 198 5 30 chrX 15911952 15912063 -150738233 - MTC LTR MaLR -311 110 1 5 706 355 245 45 45 chrX 15912157 15912358 -150737938 - RMER17D LTR ERVK -453 436 236 5 706 2116 162 8 26 chrX 15912876 15913257 -150737039 - ORR1C1 LTR MaLR -4 374 1 5 706 246 375 109 41 chrX 15913413 15913680 -150736616 + LTR16E1 LTR ERVL 253 537 -1 5 706 1685 135 96 17 chrX 15913796 15914098 -150736198 - ORR1A3 LTR MaLR 0 326 1 5 706 1338 169 1 42 chrX 15914484 15914792 -150735504 + MTA_Mm LTR MaLR 3 293 -114 5 706 3223 52 2 0 chrX 15914792 15915337 -150734959 - L1Md_F3 LINE L1 -582 6002 5457 5 706 1535 132 4 16 chrX 15915337 15915365 -150734931 + MTA_Mm LTR MaLR 153 178 -218 5 706 3269 65 32 0 chrX 15915365 15915798 -150734498 + L1Md_F3 LINE L1 6137 6583 -1 5 706 1535 132 4 16 chrX 15915798 15916016 -150734280 + MTA_Mm LTR MaLR 179 395 -1 5 706 2440 157 2 0 chrX 15916016 15916449 -150733847 + L1_Mus1 LINE L1 4544 4977 -906 5 706 2924 3 0 0 chrX 15916450 15916772 -150733524 - RLTRETN_Mm LTR ERVK 0 322 1 5 706 40681 15 1 3 chrX 15916772 15921624 -150728672 - MMETn-int LTR ERVK 0 4844 1 5 706 2913 6 0 0 chrX 15921624 15921946 -150728350 - RLTRETN_Mm LTR ERVK 0 322 1 5 706 6791 98 0 41 chrX 15921946 15923631 -150726665 + L1_Mus1 LINE L1 4973 6567 0 5 706 702 309 5 46 chrX 15923746 15923963 -150726333 + MER63A DNA AcHobo 2 209 -1 5 706 292 285 30 8 chrX 15923964 15924095 -150726201 + L1MC4 LINE L1 7527 7660 -382 5 706 434 306 23 18 chrX 15924146 15924331 -150725965 + B3 SINE B2 2 186 -9 5 706 302 278 102 8 chrX 15924346 15924473 -150725823 + B1F SINE Alu 3 141 -8 5 706 286 325 0 0 chrX 15924488 15924568 -150725728 + ID4 SINE ID 2 81 -2 5 706 392 336 47 0 chrX 15924786 15924914 -150725382 + ID_B1 SINE B4 91 224 0 5 706 218 226 7 86 chrX 15925063 15925203 -150725093 + A-rich Low_complexity Low_complexity 2 130 0 5 706 21 36 0 0 chrX 15925356 15925384 -150724912 + AT_rich Low_complexity Low_complexity 1 28 0 5 706 9369 101 0 4 chrX 15925384 15926793 -150723503 - L1_Mus2 LINE L1 -62 5821 4419 5 706 5192 103 1 8 chrX 15926793 15927536 -150722760 + L1_Mus2 LINE L1 5828 6565 -1 5 706 213 39 0 0 chrX 15927549 15927575 -150722721 + (TAAAA)n Simple_repeat Simple_repeat 3 28 0 5 706 2679 67 3 11 chrX 15927595 15927944 -150722352 - ORR1A1 LTR MaLR 0 346 1 5 706 1611 275 3 5 chrX 15927944 15928332 -150721964 - Lx6 LINE L1 -212 7248 6862 5 706 2083 246 127 0 chrX 15928589 15929196 -150721100 - Lx6 LINE L1 -593 6867 6184 5 706 642 49 0 0 chrX 15929198 15929280 -150721016 + (CA)n Simple_repeat Simple_repeat 1 82 0 5 706 360 97 0 0 chrX 15929280 15929342 -150720954 + (GA)n Simple_repeat Simple_repeat 1 62 0 5 706 198 103 0 0 chrX 15929366 15929395 -150720901 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 706 311 292 45 56 chrX 15929395 15929573 -150720723 - Lx6 LINE L1 -1300 6160 5985 5 706 8101 90 1 9 chrX 15929604 15930838 -150719458 + L1Md_F2 LINE L1 1765 2988 -2895 5 706 12145 88 2 2 chrX 15930838 15932608 -150717688 + L1Md_F2 LINE L1 3816 5586 -297 5 706 6930 93 27 7 chrX 15932609 15933585 -150716711 + L1Md_F2 LINE L1 5588 6582 0 5 706 1451 232 110 5 chrX 15933839 15934220 -150716076 + MTD LTR MaLR 1 421 0 6 706 1035 257 155 12 chrX 15934221 15934563 -150715733 + MTD-int LTR MaLR 2 392 -866 6 706 4783 127 13 1 chrX 15934566 15935337 -150714959 + L1VL4 LINE L1 194 973 -5329 6 706 2543 104 0 15 chrX 15935332 15935743 -150714553 + MusHAL1 LINE L1 778 1182 -1530 6 706 5671 143 71 4 chrX 15935745 15937221 -150713075 + Lx2 LINE L1 5064 6637 -360 6 706 910 167 118 0 chrX 15937215 15937419 -150712877 + Lx2 LINE L1 6770 6997 0 6 706 2076 264 61 119 chrX 15937670 15938360 -150711936 + MTD-int LTR MaLR 380 1039 -219 6 706 4254 83 26 0 chrX 15938360 15938929 -150711367 - MT2B2 LTR ERVL 0 584 1 6 706 2076 264 61 119 chrX 15938929 15939153 -150711143 + MTD-int LTR MaLR 1040 1241 -17 6 706 1701 241 77 18 chrX 15939154 15939543 -150710753 + MTD LTR MaLR 1 412 -7 6 706 294 95 0 0 chrX 15939552 15939594 -150710702 + MTD-int LTR MaLR 1057 1098 0 6 706 260 169 107 53 chrX 15939594 15939669 -150710627 + MTD LTR MaLR 1 79 -340 6 706 396 0 0 0 chrX 15939691 15939735 -150710561 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 706 1261 272 82 57 chrX 15939747 15939946 -150710350 + MTD LTR MaLR 3 209 -210 6 706 687 250 80 0 chrX 15939946 15940146 -150710150 + B3 SINE B2 1 216 0 6 706 1261 272 82 57 chrX 15940146 15940351 -150709945 + MTD LTR MaLR 210 417 -2 6 706 387 179 0 0 chrX 15941872 15941978 -150708318 + CT-rich Low_complexity Low_complexity 1 106 0 6 706 315 306 63 27 chrX 15942420 15942531 -150707765 + LTR16A LTR ERVL 31 145 -306 6 706 267 346 64 18 chrX 15942599 15942708 -150707588 + LTR16A LTR ERVL 248 361 -90 6 706 2205 99 16 3 chrX 15942996 15943309 -150706987 + ORR1A2 LTR MaLR 3 319 -8 6 706 626 268 76 53 chrX 15943919 15944183 -150706113 + MT2A LTR ERVL 264 533 0 6 706 2432 192 102 18 chrX 15944185 15944673 -150705623 - RMER19B LTR ERVK 0 902 374 6 706 209 163 0 20 chrX 15945103 15945153 -150705143 + T-rich Low_complexity Low_complexity 2 50 0 6 706 5651 105 11 6 chrX 15945157 15945979 -150704317 - L1_Mus3 LINE L1 -15 6623 5798 6 706 6225 78 1 1 chrX 15945993 15946852 -150703444 - L1_Mus1 LINE L1 0 6567 5709 6 706 4241 110 1 34 chrX 15946851 15947531 -150702765 + L1_Mus1 LINE L1 5075 5732 -151 6 706 7031 135 26 3 chrX 15947535 15947862 -150702434 - L1_Mm LINE L1 -96 5787 5449 6 706 279 0 0 0 chrX 15947862 15947893 -150702403 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 706 7031 135 26 3 chrX 15947893 15948781 -150701515 - L1_Mm LINE L1 -435 5448 4545 6 706 1456 210 106 29 chrX 15949568 15949946 -150700350 + MTB_Mm LTR MaLR 1 407 0 6 706 3404 184 40 17 chrX 15950024 15950717 -150699579 + L1VL2 LINE L1 65 773 -5562 6 706 9047 164 16 24 chrX 15950716 15952665 -150697631 + L1_Mur1 LINE L1 2697 4631 -1255 6 706 298 241 9 18 chrX 15952804 15952918 -150697378 + GA-rich Low_complexity Low_complexity 1 113 0 6 706 760 263 200 14 chrX 15953133 15953503 -150696793 - Charlie2a DNA MER1_type -725 2136 1698 6 706 238 295 152 23 chrX 15953542 15953674 -150696622 - Charlie2b DNA MER1_type -1938 844 696 6 706 303 200 129 0 chrX 15953734 15953804 -150696492 + ID4_ SINE ID 5 83 0 6 706 545 364 96 65 chrX 15953938 15954335 -150695961 + MLT1F2 LTR MaLR 61 469 -91 6 706 547 297 53 0 chrX 15954969 15955178 -150695118 + MER2 DNA MER2_type 88 307 -38 6 706 26 30 0 0 chrX 15955980 15956013 -150694283 + AT_rich Low_complexity Low_complexity 1 33 0 6 706 322 323 53 15 chrX 15956320 15956452 -150693844 - MIR SINE MIR -94 168 32 6 706 6214 88 11 1 chrX 15957105 15957994 -150692302 - L1_Mus1 LINE L1 0 6567 5670 6 706 13586 67 1 2 chrX 15957990 15959857 -150690439 + L1_Mus1 LINE L1 3722 5585 -298 6 706 7968 58 2 0 chrX 15959858 15960852 -150689444 + L1Md_F2 LINE L1 5587 6582 0 6 706 257 360 0 0 chrX 15960852 15960952 -150689344 + LTR86A2 LTR ERVL 132 231 -277 6 706 272 176 71 29 chrX 15961058 15961128 -150689168 + MER89 LTR ERV1 487 559 0 6 706 842 293 18 79 chrX 15961163 15961315 -150688981 + MER89 LTR ERV1 240 387 -172 6 706 745 157 242 0 chrX 15961315 15961493 -150688803 + URR1B DNA MER1_type 4 224 -1 6 706 842 293 18 79 chrX 15961493 15961670 -150688626 + MER89 LTR ERV1 388 549 -10 6 706 342 171 94 35 chrX 15962018 15962042 -150688254 + RMER19A LTR ERVK 15 40 -697 6 706 625 161 0 31 chrX 15962042 15962170 -150688126 - Lx2B LINE L1 -5 6995 6872 6 706 3324 154 103 2 chrX 15962170 15962745 -150687551 + RMER19A LTR ERVK 41 737 0 6 706 2508 122 0 0 chrX 15962746 15963172 -150687124 - Lx2B LINE L1 -1031 5969 5547 6 706 495 246 62 61 chrX 15963252 15963659 -150686637 + L1_Mur3 LINE L1 522 804 -6924 6 706 2653 164 26 23 chrX 15963652 15964220 -150686076 + L1_Mur3 LINE L1 4587 5156 -724 6 706 1741 194 88 8 chrX 15964221 15964574 -150685722 - RLTR18B LTR ERVK -121 391 11 6 706 721 155 116 29 chrX 15964582 15964755 -150685541 + L1_Mur3 LINE L1 5200 5387 -493 6 706 450 0 0 0 chrX 15964755 15964805 -150685491 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 706 369 0 0 0 chrX 15964805 15964845 -150685451 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 706 516 267 54 39 chrX 15964923 15965254 -150685042 + Lx7 LINE L1 7361 7696 0 6 706 6449 123 15 11 chrX 15966193 15967233 -150683063 + Lx LINE L1 5611 6654 0 6 706 382 336 33 29 chrX 15967452 15967708 -150682588 + Tigger5 DNA MER2_type 89 285 -2121 6 706 339 258 0 53 chrX 15969356 15969450 -150680846 + PB1 SINE Alu 37 125 -2 6 706 1797 288 175 18 chrX 15969967 15970148 -150680148 - Lx8 LINE L1 -8 7465 7275 6 706 936 183 119 0 chrX 15970148 15970350 -150679946 - URR1A DNA MER1_type 0 226 1 6 706 1797 288 175 18 chrX 15970350 15970984 -150679312 - Lx8 LINE L1 -199 7274 6522 6 706 415 289 6 19 chrX 15970981 15971143 -150679153 - L1_Rod LINE L1 -2842 3005 2846 6 706 849 290 73 58 chrX 15971146 15971912 -150678384 - L1_Rod LINE L1 -3859 2021 1230 6 706 6882 81 10 6 chrX 15972107 15973154 -150677142 - L1Md_F2 LINE L1 -13 6569 5517 6 706 2156 27 114 0 chrX 15973154 15973416 -150676880 - RLTR10B LTR ERVK 0 292 1 6 706 4661 70 0 12 chrX 15973416 15973682 -150676614 - L1Md_F2 LINE L1 -367 5516 5252 6 706 38382 19 5 6 chrX 15973680 15980267 -150670029 - L1Md_A LINE L1 0 6582 8 6 706 26911 95 18 4 chrX 15980268 15985116 -150665180 - L1Md_F2 LINE L1 -616 5267 351 6 706 276 243 147 55 chrX 15985111 15985220 -150665076 + Lx8 LINE L1 7206 7324 -149 6 706 1756 211 106 32 chrX 15985246 15985754 -150664542 + RMER19C LTR ERVK 142 664 -238 6 706 231 211 13 53 chrX 15985769 15985844 -150664452 + Lx8 LINE L1 7400 7471 -2 6 706 1058 113 0 0 chrX 15986336 15986478 -150663818 + B1_Mus1 SINE Alu 1 142 -6 6 706 603 0 0 0 chrX 15986479 15986546 -150663750 + (GAA)n Simple_repeat Simple_repeat 1 67 0 6 706 1056 150 166 0 chrX 15987863 15988056 -150662240 + URR1A DNA MER1_type 2 226 0 6 706 248 361 72 0 chrX 15988210 15988307 -150661989 + LTR16E1 LTR ERVL 1 104 -434 6 706 396 336 22 0 chrX 15989629 15989766 -150660530 + B1F2 SINE Alu 1 140 -9 6 706 311 351 9 35 chrX 15989813 15989928 -150660368 + PB1D10 SINE Alu 1 112 -5 6 706 496 62 38 0 chrX 15989930 15990010 -150660286 + (TTTA)n Simple_repeat Simple_repeat 2 84 0 6 88 5013 136 68 0 chrX 15990010 15990809 -150659487 - Lx4A LINE L1 -19 7039 6187 6 707 2572 136 89 16 chrX 15990810 15991022 -150659274 + L1_Mur2 LINE L1 4380 4591 -1286 6 707 2237 115 12 0 chrX 15991022 15991345 -150658951 + ORR1A2 LTR MaLR 1 327 0 6 707 2572 136 89 16 chrX 15991345 15991624 -150658672 + L1_Mur2 LINE L1 4592 4907 -970 6 707 1025 305 55 27 chrX 15991740 15992070 -150658226 + MLT1F1 LTR MaLR 120 458 -111 6 707 3622 49 2 4 chrX 15992103 15992556 -150657740 + L1Md_F2 LINE L1 6131 6582 0 6 707 1418 227 76 54 chrX 15992572 15992978 -150657318 - MTD LTR MaLR 0 419 5 6 707 1368 143 0 18 chrX 15993374 15993601 -150656695 - Lx2 LINE L1 0 6997 6775 6 707 597 115 10 0 chrX 15993601 15993697 -150656599 - Lx2 LINE L1 -354 6643 6547 6 707 2423 102 35 0 chrX 15993697 15994070 -150656226 + L1_Mm LINE L1 5234 5619 -264 6 707 185 65 0 31 chrX 15994206 15994238 -150656058 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 6 707 472 277 10 26 chrX 15994507 15994644 -150655652 + MLT1A1 LTR MaLR 294 450 -17 6 707 852 200 0 16 chrX 15994655 15994848 -150655448 + Lx4A LINE L1 6869 7058 0 6 707 30 27 0 0 chrX 15994848 15994885 -150655411 + AT_rich Low_complexity Low_complexity 1 37 0 6 707 690 348 57 31 chrX 15994896 15995246 -150655050 - ORR1E LTR MaLR 0 359 1 6 707 453 236 38 0 chrX 15995288 15995394 -150654902 + B1_Mur1 SINE Alu 38 147 -2 6 707 258 343 53 53 chrX 15995770 15995958 -150654338 + MLT1K LTR MaLR 367 554 -41 6 707 7310 89 4 6 chrX 15996176 15997288 -150653008 - L1_Mus3 LINE L1 -2 6636 5528 6 707 312 333 25 33 chrX 15997436 15997557 -150652739 + PB1D7 SINE Alu 1 120 0 6 707 394 358 98 89 chrX 15997736 15997996 -150652300 + LTR16B1 LTR ERVL 5 270 -210 6 707 450 79 0 0 chrX 15997996 15998059 -150652237 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 707 394 358 98 89 chrX 15998059 15998270 -150652026 + LTR16B1 LTR ERVL 271 480 0 6 707 796 280 102 34 chrX 15998969 15999235 -150651061 - B4A SINE B4 -2 290 7 6 707 423 56 0 0 chrX 15999238 15999292 -150651004 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 707 2050 236 25 17 chrX 15999292 15999766 -150650530 + Lx6 LINE L1 6178 6655 -805 6 707 1031 251 38 4 chrX 15999763 15999999 -150650297 + Lx6 LINE L1 6982 7225 -235 6 707 351 0 0 0 chrX 16000269 16000308 -150649988 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 707 25 75 0 0 chrX 16000407 16000460 -150649836 + AT_rich Low_complexity Low_complexity 1 53 0 2 707 576 272 7 14 chrX 16000680 16000818 -150649478 - B1_Mm SINE Alu -2 145 9 3 707 6474 95 25 0 chrX 16000875 16002220 -150648076 - L1_Mus2 LINE L1 -2 6564 5187 4 707 3714 75 0 4 chrX 16002218 16002755 -150647541 - L1Md_F2 LINE L1 -1494 4389 3855 4 707 11295 55 2 0 chrX 16002754 16004621 -150645675 + L1Md_F2 LINE L1 4375 6244 -338 4 707 16117 149 21 68 chrX 16004618 16008613 -150641683 - L1Md_F LINE L1 -1734 4149 395 5 707 261 0 0 0 chrX 16008716 16008745 -150641551 + (TG)n Simple_repeat Simple_repeat 1 29 0 6 707 295 353 0 66 chrX 16008786 16008877 -150641419 - RSINE1 SINE B4 -27 138 54 7 707 244 286 23 23 chrX 16008885 16008971 -150641325 - B4A SINE B4 -199 93 8 8 707 1954 136 18 87 chrX 16008982 16009362 -150640934 + ORR1B1 LTR MaLR 41 394 0 9 707 472 255 130 29 chrX 16009664 16009902 -150640394 - L1MB7 LINE L1 -16 6168 5907 1 707 569 301 0 7 chrX 16010401 16010538 -150639758 + ID_B1 SINE B4 81 216 -8 1 707 273 119 0 0 chrX 16010675 16010717 -150639579 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 1 707 258 283 59 4 chrX 16011350 16011450 -150638846 - B1F1 SINE Alu -1 116 4 1 707 621 209 0 0 chrX 16012073 16012221 -150638075 + (TCTA)n Simple_repeat Simple_repeat 2 149 0 1 707 299 241 13 0 chrX 16012222 16012301 -150637995 + CT-rich Low_complexity Low_complexity 4 83 0 1 707 432 0 0 0 chrX 16012302 16012350 -150637946 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 707 1055 79 0 0 chrX 16012798 16012938 -150637358 + B1_Mus1 SINE Alu 9 148 0 1 707 320 342 147 21 chrX 16013806 16014025 -150636271 + MIRb SINE MIR 10 262 -6 1 707 493 323 55 20 chrX 16014133 16014332 -150635964 + B4A SINE B4 3 208 -84 1 707 530 305 15 0 chrX 16014579 16014710 -150635586 + ID_B1 SINE B4 87 219 -5 2 707 549 0 0 0 chrX 16014849 16014910 -150635386 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 707 216 0 0 0 chrX 16014910 16014933 -150635363 + (GA)n Simple_repeat Simple_repeat 2 25 0 2 707 234 253 141 24 chrX 16015177 16015262 -150635034 - MER34A LTR ERV1 -472 99 5 2 707 25 0 0 0 chrX 16015522 16015547 -150634749 + AT_rich Low_complexity Low_complexity 1 25 0 2 707 2164 139 10 10 chrX 16016036 16016496 -150633800 + L1VL1 LINE L1 1 400 -6022 2 707 1288 151 43 0 chrX 16016496 16016728 -150633568 + L1Md_F LINE L1 383 624 -5895 2 707 2545 95 46 0 chrX 16016734 16017123 -150633173 + L1Md_F2 LINE L1 4676 5082 -801 2 707 35869 22 4 8 chrX 16017124 16022906 -150627390 + L1Md_A LINE L1 1 5585 -298 2 707 8751 16 0 1 chrX 16022908 16023904 -150626392 + L1Md_A LINE L1 5588 6582 0 2 707 3670 81 4 0 chrX 16023947 16024465 -150625831 + L1Md_F2 LINE L1 5066 5585 -298 2 707 7514 66 1 27 chrX 16024466 16024559 -150625737 + L1Md_F2 LINE L1 5587 5663 -919 2 707 1949 164 3 3 chrX 16024559 16024870 -150625426 - RLTR10E LTR ERVK 0 311 1 2 707 7514 66 1 27 chrX 16024870 16025784 -150624512 + L1Md_F2 LINE L1 5664 6568 -14 2 707 225 284 59 15 chrX 16025983 16026051 -150624245 + B4A SINE B4 216 286 -6 3 707 466 258 168 18 chrX 16026212 16026492 -150623804 + L1MB4 LINE L1 5799 6120 -60 3 707 260 318 17 43 chrX 16026494 16026609 -150623687 + PB1D7 SINE Alu 1 112 -8 3 707 279 206 0 0 chrX 16026872 16026930 -150623366 + PB1D7 SINE Alu 30 87 -33 3 707 228 297 38 23 chrX 16026966 16027109 -150623187 + B1F2 SINE Alu 1 144 -5 3 707 342 227 0 0 chrX 16027649 16027715 -150622581 - ID2 SINE ID -17 66 1 3 707 226 345 168 15 chrX 16028617 16028814 -150621482 + LTR33 LTR ERVL 289 515 0 3 707 1014 278 80 67 chrX 16028819 16029129 -150621167 - MTEa LTR MaLR 0 379 66 3 707 1550 230 61 2 chrX 16029129 16029525 -150620771 - MTD LTR MaLR 0 419 1 3 707 1014 278 80 67 chrX 16029525 16029588 -150620708 - MTEa LTR MaLR -314 65 1 3 707 215 221 0 227 chrX 16029758 16029846 -150620450 + RSINE1 SINE B4 98 165 0 3 707 282 183 0 0 chrX 16029846 16029917 -150620379 + (CA)n Simple_repeat Simple_repeat 1 71 0 4 707 261 57 0 0 chrX 16029917 16029952 -150620344 + (ATG)n Simple_repeat Simple_repeat 2 36 0 4 707 1112 205 0 23 chrX 16029962 16030177 -150620119 + B3 SINE B2 3 212 -4 4 707 1677 220 38 57 chrX 16030569 16030963 -150619333 + MTD LTR MaLR 1 387 -32 4 707 646 12 23 11 chrX 16030963 16031050 -150619246 + (GTTTG)n Simple_repeat Simple_repeat 2 89 0 4 707 1677 220 38 57 chrX 16031050 16031074 -150619222 + MTD LTR MaLR 388 411 -8 4 707 771 237 34 53 chrX 16031297 16031506 -150618790 - RLTR31_Mm LTR ERVK 0 561 357 4 707 484 114 0 0 chrX 16031509 16031579 -150618717 - RLTR17 LTR ERVK -622 70 1 4 707 30 27 0 0 chrX 16031814 16031851 -150618445 + AT_rich Low_complexity Low_complexity 1 37 0 4 707 217 0 61 0 chrX 16032074 16032107 -150618189 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 4 707 242 300 29 0 chrX 16032223 16032293 -150618003 + GA-rich Low_complexity Low_complexity 4 75 0 4 707 448 276 83 6 chrX 16032469 16032637 -150617659 + L1MA4A LINE L1 5676 5856 -447 5 707 397 319 112 34 chrX 16033009 16033326 -150616970 + MLT2D LTR ERVL 6 553 -3 5 707 259 319 11 21 chrX 16033782 16033875 -150616421 - MER5A1 DNA MER1_type 0 166 75 5 707 378 252 23 150 chrX 16034564 16034737 -150615559 + L1VL2 LINE L1 179 353 -6069 5 707 283 248 183 18 chrX 16034782 16034946 -150615350 + L1_Mus2 LINE L1 609 799 -5817 5 707 11827 113 7 49 chrX 16034958 16037599 -150612697 + L1_Mus2 LINE L1 725 3208 -2675 5 707 6621 100 18 4 chrX 16037591 16039161 -150611135 + L1_Mus2 LINE L1 4985 6565 -1 5 707 2436 99 31 6 chrX 16039508 16039863 -150610433 + L1Md_F2 LINE L1 6209 6572 -10 5 707 378 0 0 0 chrX 16040100 16040142 -150610154 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 707 666 301 77 102 chrX 16040190 16040475 -150609821 + B4 SINE B4 4 281 -11 5 707 201 108 0 0 chrX 16040550 16040587 -150609709 + (A)n Simple_repeat Simple_repeat 1 37 0 5 707 551 335 86 52 chrX 16041384 16041652 -150608644 + B4 SINE B4 5 281 -11 5 707 850 289 43 0 chrX 16041744 16041952 -150608344 + ID_B1 SINE B4 2 218 -6 6 707 22 0 0 0 chrX 16041980 16042002 -150608294 + AT_rich Low_complexity Low_complexity 1 22 0 6 707 378 336 101 41 chrX 16042161 16042428 -150607868 - MER2 DNA MER2_type -2 343 61 6 707 776 307 0 5 chrX 16042440 16042656 -150607640 - ID_B1 SINE B4 -9 215 1 6 707 10941 109 4 9 chrX 16042797 16044811 -150605485 - L1_Mus3 LINE L1 0 6638 4641 6 707 2886 41 0 88 chrX 16044811 16045211 -150605085 - RLTR10B2 LTR ERVK 0 365 1 6 707 10941 124 5 8 chrX 16045211 16045758 -150604538 - L1_Mus3 LINE L1 -1243 4640 4088 6 707 353 250 76 23 chrX 16045911 16046042 -150604254 - RLTR40 LTR ERVK -47 770 633 6 707 483 18 0 0 chrX 16046051 16046107 -150604189 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 707 3650 2 2 0 chrX 16046207 16046613 -150603683 - L1Md_A LINE L1 0 6582 6176 6 707 4934 3 0 0 chrX 16046613 16047289 -150603007 + L1Md_A LINE L1 5483 6158 -424 6 707 1331 251 75 36 chrX 16047300 16047492 -150602804 - RLTR40 LTR ERVK -323 494 296 6 707 426 88 0 0 chrX 16047492 16047560 -150602736 + (CA)n Simple_repeat Simple_repeat 2 69 0 6 707 1331 251 75 36 chrX 16047560 16047834 -150602462 - RLTR40 LTR ERVK -522 295 11 6 707 34466 49 14 16 chrX 16048258 16053578 -150596718 + L1Md_A LINE L1 275 5586 -297 7 707 8575 24 2 0 chrX 16053578 16054572 -150595724 + L1Md_A LINE L1 5587 6582 0 7 707 2175 200 77 4 chrX 16054933 16055424 -150594872 + RLTR11A2 LTR ERVK 1 527 0 7 707 340 250 81 0 chrX 16055519 16055667 -150594629 + L1M2 LINE L1 5132 5291 -852 7 707 1725 252 51 44 chrX 16055654 16056672 -150593624 + Lx9 LINE L1 5431 6621 -1023 7 707 273 321 68 74 chrX 16056813 16056961 -150593335 + RLTR26 LTR ERVK 177 323 -319 7 707 3171 146 57 54 chrX 16056961 16057810 -150592486 - RMER17A2 LTR ERVK 0 958 107 7 707 2438 85 49 5 chrX 16057811 16058200 -150592096 + MusHAL1 LINE L1 1067 1472 -1240 7 707 4236 162 37 8 chrX 16058197 16058900 -150591396 + L1_Mus4 LINE L1 5022 5750 -133 7 707 207 0 0 0 chrX 16058900 16058923 -150591373 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 707 6609 55 1 0 chrX 16058928 16059746 -150590550 - L1Md_F2 LINE L1 -14 6568 5750 7 707 4236 90 91 20 chrX 16059746 16059901 -150590395 + L1_Mus4 LINE L1 5754 5909 -727 7 707 3678 174 36 25 chrX 16060268 16061019 -150589277 - Lx2B LINE L1 -3 6997 6239 8 707 2283 162 59 0 chrX 16061019 16061458 -150588838 + Lx2 LINE L1 5781 6245 -752 8 707 2158 103 75 21 chrX 16061482 16061858 -150588438 - Lx LINE L1 -286 6368 5973 8 707 1150 128 31 0 chrX 16061883 16062079 -150588217 + Lx2 LINE L1 6446 6647 -7 8 707 1341 145 0 5 chrX 16062108 16062323 -150587973 - RMER4A LTR ERVK -252 214 1 8 707 270 81 0 0 chrX 16062601 16062638 -150587658 + (T)n Simple_repeat Simple_repeat 1 37 0 8 707 21 0 0 0 chrX 16062705 16062726 -150587570 + AT_rich Low_complexity Low_complexity 1 21 0 8 707 24 0 0 0 chrX 16063429 16063453 -150586843 + AT_rich Low_complexity Low_complexity 1 24 0 8 707 22 35 0 0 chrX 16064625 16064654 -150585642 + AT_rich Low_complexity Low_complexity 1 29 0 8 707 235 331 64 115 chrX 16064758 16064795 -150585501 + B4 SINE B4 70 218 -74 8 707 574 283 8 0 chrX 16064795 16064915 -150585381 + B1_Mur1 SINE Alu 21 141 -8 8 707 520 288 52 18 chrX 16065035 16065321 -150584975 + L1MD LINE L1 3370 3665 -2481 9 707 356 294 103 14 chrX 16065373 16065518 -150584778 - MLT1C LTR MaLR 0 467 310 9 707 748 290 16 0 chrX 16065542 16065725 -150584571 - B3 SINE B2 -1 215 30 9 707 355 68 17 17 chrX 16065758 16065818 -150584478 + (TTA)n Simple_repeat Simple_repeat 2 61 0 9 707 622 231 45 0 chrX 16065828 16065962 -150584334 - B1_Mur2 SINE Alu -9 140 1 9 707 219 158 0 26 chrX 16066060 16066099 -150584197 + CT-rich Low_complexity Low_complexity 3 40 0 9 707 336 64 0 0 chrX 16066099 16066146 -150584150 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 707 534 242 89 0 chrX 16066174 16066298 -150583998 + ID_B1 SINE B4 88 222 -2 9 707 38206 24 1 6 chrX 16066448 16072650 -150577646 - L1Md_A LINE L1 -2 6580 413 9 707 325 341 44 37 chrX 16073194 16073425 -150576871 - ORR1E LTR MaLR -4 375 134 9 707 4786 51 2 3 chrX 16073428 16074019 -150576277 - L1Md_T LINE L1 -4 6578 5989 1 707 3175 38 0 0 chrX 16074026 16074425 -150575871 + L1Md_T LINE L1 5588 5986 -596 1 707 495 343 7 21 chrX 16074425 16074565 -150575731 - ORR1E LTR MaLR -212 147 10 9 707 6113 63 0 1 chrX 16074588 16075404 -150574892 + L1Md_F2 LINE L1 4772 5586 -297 1 707 7573 70 6 11 chrX 16075404 16076405 -150573891 + L1Md_F2 LINE L1 5587 6582 0 1 707 282 320 37 46 chrX 16076651 16076759 -150573537 - LTR33A_ LTR ERVL -309 222 116 1 707 281 336 67 0 chrX 16076890 16076994 -150573302 + PB1D10 SINE Alu 2 112 -5 1 707 2934 54 11 0 chrX 16077188 16077557 -150572739 - L1_Mus1 LINE L1 -1 6566 6194 1 707 514 217 100 8 chrX 16077704 16077834 -150572462 + B1_Mur1 SINE Alu 1 142 -7 1 707 26 0 0 0 chrX 16077881 16077907 -150572389 + AT_rich Low_complexity Low_complexity 1 26 0 1 707 4302 22 0 0 chrX 16078256 16078912 -150571384 - L1Md_A LINE L1 -556 6026 5371 1 707 4205 60 4 2 chrX 16078913 16079446 -150570850 + L1Md_F2 LINE L1 6049 6582 0 1 707 495 0 0 0 chrX 16079597 16079652 -150570644 + (TTTTG)n Simple_repeat Simple_repeat 2 56 0 1 707 368 137 0 31 chrX 16079753 16079851 -150570445 + T-rich Low_complexity Low_complexity 1 95 0 1 707 2136 155 48 31 chrX 16079968 16080381 -150569915 - RLTR25A LTR ERVK 0 1103 684 1 707 1171 123 84 0 chrX 16080383 16080495 -150569801 - Lx2 LINE L1 -1 6996 6883 1 707 180 0 0 0 chrX 16080495 16080515 -150569781 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 1 707 1171 123 84 0 chrX 16080515 16080605 -150569691 - Lx2 LINE L1 -115 6882 6779 1 707 661 85 41 33 chrX 16080606 16080727 -150569569 + Lx2 LINE L1 6595 6716 -281 1 707 2447 100 0 3 chrX 16080735 16081076 -150569220 - L1_Mus4 LINE L1 -5 6631 6292 1 707 851 19 0 0 chrX 16081076 16081179 -150569117 + L1_Mus4 LINE L1 6152 6254 -382 1 707 3797 173 32 0 chrX 16081179 16081855 -150568441 - RLTR25A LTR ERVK -405 698 1 1 707 339 247 32 0 chrX 16082272 16082365 -150567931 - L1_Rod LINE L1 -18 5829 5734 1 707 355 270 0 0 chrX 16082419 16082493 -150567803 - PB1D10 SINE Alu -39 78 5 1 707 238 370 37 9 chrX 16082493 16082528 -150567768 - B4 SINE B4 -126 166 55 1 707 423 269 138 22 chrX 16082644 16082876 -150567420 + Charlie4a DNA MER1_type 4 262 -246 1 707 266 354 49 49 chrX 16082919 16083103 -150567193 + MER44D DNA MER2_type 92 275 -430 1 707 1680 238 66 17 chrX 16083103 16083574 -150566722 - Lx8 LINE L1 -563 6910 6417 1 707 546 307 71 32 chrX 16083677 16083832 -150566464 - RSINE1 SINE B4 0 165 5 1 707 407 319 17 8 chrX 16084061 16084178 -150566118 - RLTR18 LTR ERVK -3 509 392 1 707 1151 246 25 88 chrX 16084186 16084587 -150565709 - RLTR18B LTR ERVK -12 500 144 1 707 996 281 9 59 chrX 16084566 16084888 -150565408 - RLTR18 LTR ERVK -306 310 5 1 707 388 301 30 5 chrX 16085029 16085229 -150565067 - L1M4 LINE L1 -381 5803 5599 1 707 1798 233 24 14 chrX 16085253 16085671 -150564625 + Lx6 LINE L1 6869 7290 -170 1 707 2494 238 113 9 chrX 16085685 16086322 -150563974 + Lx6 LINE L1 6598 7300 -160 1 707 272 83 40 40 chrX 16086605 16086680 -150563616 + T-rich Low_complexity Low_complexity 3 77 0 1 707 43 20 0 0 chrX 16086805 16086855 -150563441 + AT_rich Low_complexity Low_complexity 1 50 0 1 707 789 220 14 7 chrX 16087077 16087219 -150563077 - B1_Mur1 SINE Alu -1 148 6 1 707 359 298 61 24 chrX 16087252 16087417 -150562879 - Lx8 LINE L1 -117 7356 7186 1 707 240 186 0 0 chrX 16087469 16087512 -150562784 - Lx8 LINE L1 -253 7220 7178 1 707 2651 281 38 2 chrX 16087515 16088326 -150561970 - Lx8 LINE L1 -266 7207 6368 1 707 823 152 6 6 chrX 16088335 16088500 -150561796 + (TA)n Simple_repeat Simple_repeat 2 166 0 1 707 21 71 0 0 chrX 16088508 16088550 -150561746 + AT_rich Low_complexity Low_complexity 1 42 0 1 707 360 253 84 0 chrX 16088551 16088646 -150561650 + Lx8 LINE L1 6198 6300 -1173 1 707 345 140 0 0 chrX 16088694 16088751 -150561545 + (TCCC)n Simple_repeat Simple_repeat 4 60 0 1 707 597 283 0 8 chrX 16088784 16088912 -150561384 - B1_Mur1 SINE Alu -21 128 2 1 707 285 353 0 0 chrX 16088918 16088986 -150561310 - tRNA-Trp-TGG tRNA tRNA -2 73 6 1 707 306 0 0 0 chrX 16089039 16089073 -150561223 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 707 596 50 12 0 chrX 16089211 16089291 -150561005 + (GGGAGA)n Simple_repeat Simple_repeat 2 82 0 1 707 786 314 39 11 chrX 16089326 16089606 -150560690 + B4A SINE B4 1 288 -4 1 707 265 313 17 0 chrX 16089630 16089745 -150560551 - L1M4 LINE L1 -573 5591 5475 1 707 1155 289 71 28 chrX 16090601 16090954 -150559342 + ORR1D2 LTR MaLR 1 368 -2 1 707 3275 287 80 58 chrX 16090956 16092112 -150558184 + ORR1D2-int LTR MaLR 1 1186 -184 1 707 853 83 0 57 chrX 16092112 16092253 -150558043 - L1_Mus2 LINE L1 0 6566 6434 1 707 3275 287 80 58 chrX 16092253 16092282 -150558014 + ORR1D2-int LTR MaLR 1187 1212 -158 1 707 1170 250 114 22 chrX 16092286 16092630 -150557666 + ORR1D2 LTR MaLR 1 379 0 1 707 344 253 104 26 chrX 16092714 16092887 -150557409 - L1MDb LINE L1 -5162 1340 1154 1 707 707 200 7 27 chrX 16093071 16093220 -150557076 - B1_Mur4 SINE Alu 0 150 5 1 707 27159 110 6 1 chrX 16094378 16099458 -150550838 - L1_Mus1 LINE L1 0 6567 1463 1 707 297 219 0 0 chrX 16100198 16100271 -150550025 + (TTG)n Simple_repeat Simple_repeat 2 74 0 1 707 386 158 114 38 chrX 16101466 16101545 -150548751 + B4 SINE B4 1 85 -207 1 707 1048 115 0 0 chrX 16101555 16101703 -150548593 + B1_Mus1 SINE Alu 1 148 0 1 707 337 228 176 10 chrX 16101724 16101826 -150548470 + PB1D9 SINE Alu 1 119 -1 1 707 347 344 8 39 chrX 16101826 16101953 -150548343 + B4 SINE B4 88 210 -82 1 707 218 204 0 0 chrX 16101960 16102009 -150548287 + T-rich Low_complexity Low_complexity 1 49 0 1 707 387 41 0 0 chrX 16102063 16102112 -150548184 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 707 207 274 14 0 chrX 16102116 16102189 -150548107 + (CATA)n Simple_repeat Simple_repeat 3 76 0 1 707 1667 269 57 19 chrX 16102556 16103087 -150547209 - Lx8 LINE L1 -130 7343 6793 1 707 419 298 70 14 chrX 16103129 16103272 -150547024 - RSINE1 SINE B4 -2 163 13 1 707 544 249 17 46 chrX 16103281 16103454 -150546842 - Lx8 LINE L1 -672 6801 6634 1 707 310 222 33 36 chrX 16103842 16103946 -150546350 - MTC LTR MaLR -288 108 6 1 707 591 272 13 13 chrX 16104067 16104216 -150546080 + B1_Mur2 SINE Alu 1 149 0 1 707 488 251 124 76 chrX 16104434 16104619 -150545677 - B3A SINE B2 0 198 5 1 707 615 133 0 0 chrX 16104889 16104979 -150545317 + B1_Mus2 SINE Alu 19 108 -39 1 707 481 257 67 7 chrX 16104983 16105132 -150545164 - L1_Rod LINE L1 -976 4871 4714 1 707 718 367 37 20 chrX 16105165 16105621 -150544675 + Lx9 LINE L1 6377 6840 -804 1 707 368 322 43 70 chrX 16106234 16106491 -150543805 - Lx8 LINE L1 -256 7217 6968 1 707 261 359 66 0 chrX 16106519 16106625 -150543671 - PB1D10 SINE Alu 0 117 5 1 707 681 302 91 23 chrX 16108556 16108898 -150541398 - MLT1A0 LTR MaLR 0 365 1 1 707 222 297 62 0 chrX 16108933 16108997 -150541299 + MIRc SINE MIR 34 101 -167 1 707 205 250 0 0 chrX 16110942 16110986 -150539310 + MIRc SINE MIR 116 159 -109 1 707 1210 41 7 0 chrX 16111938 16112084 -150538212 - B1_Mus2 SINE Alu 0 147 1 1 707 252 295 0 0 chrX 16112299 16112377 -150537919 + L1VL1 LINE L1 198 275 -6147 1 707 470 273 14 0 chrX 16112451 16112594 -150537702 + L1VL4 LINE L1 675 819 -5797 1 707 13057 120 1 15 chrX 16112587 16115181 -150535115 + L1VL4 LINE L1 725 3283 -2600 1 707 526 315 15 0 chrX 16115181 16115311 -150534985 - B1F1 SINE Alu -9 140 9 1 707 1235 89 0 6 chrX 16115474 16115654 -150534642 + (TC)n Simple_repeat Simple_repeat 2 180 0 1 707 285 29 0 0 chrX 16115654 16115687 -150534609 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 707 486 0 0 0 chrX 16115808 16115862 -150534434 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 707 961 289 119 36 chrX 16115868 16116070 -150534226 - Lx9 LINE L1 -310 7334 7140 1 707 654 68 0 0 chrX 16116070 16116158 -150534138 + (TCTA)n Simple_repeat Simple_repeat 2 89 0 1 707 961 289 119 36 chrX 16116158 16116476 -150533820 - Lx9 LINE L1 -505 7139 6773 1 707 333 47 0 0 chrX 16116724 16116767 -150533529 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 1 707 706 189 0 7 chrX 16116767 16116906 -150533390 - B1_Mur4 SINE Alu -12 138 1 1 707 311 139 0 71 chrX 16117031 16117045 -150533251 + L1_Mur2 LINE L1 2529 2540 -3337 1 707 354 276 51 0 chrX 16117045 16117143 -150533153 + PB1D10 SINE Alu 3 105 -12 1 707 447 73 0 1 chrX 16117143 16117213 -150533083 + L1_Mur2 LINE L1 2541 2611 -1303 1 707 4962 51 21 2 chrX 16117213 16117841 -150532455 + L1_Mus2 LINE L1 5927 6566 0 1 707 252 294 56 56 chrX 16117909 16118053 -150532243 + L1MD3 LINE L1 7831 7974 -21 1 707 661 293 37 37 chrX 16118126 16118317 -150531979 - B3A SINE B2 -1 197 7 1 707 24 0 0 0 chrX 16118887 16118911 -150531385 + AT_rich Low_complexity Low_complexity 1 24 0 1 707 827 200 146 0 chrX 16119466 16119651 -150530645 + B3 SINE B2 1 212 -4 1 707 255 296 43 120 chrX 16119663 16119847 -150530449 - ORR1E LTR MaLR -52 318 149 1 707 6833 55 45 2 chrX 16119880 16120771 -150529525 + RLTR13B3 LTR ERVK 1 929 0 1 707 287 288 62 12 chrX 16120929 16121010 -150529286 - ORR1E LTR MaLR -274 85 1 1 707 215 318 30 0 chrX 16121084 16121150 -150529146 - L2a LINE L2 -263 3163 3096 1 707 931 167 6 17 chrX 16121158 16121335 -150528961 + Lx4B LINE L1 6871 7045 -13 1 707 198 0 0 0 chrX 16121335 16121357 -150528939 + (TAA)n Simple_repeat Simple_repeat 2 23 0 1 707 296 362 144 40 chrX 16121478 16121777 -150528519 - L2a LINE L2 -513 2906 2577 1 88 616 299 98 13 chrX 16121783 16121965 -150528331 + B4A SINE B4 2 197 -95 1 708 1613 60 9 5 chrX 16121965 16122183 -150528113 + L1Md_F3 LINE L1 6366 6584 0 1 708 616 322 90 20 chrX 16122183 16122268 -150528028 + B4A SINE B4 198 283 -9 1 708 769 245 25 10 chrX 16122431 16122629 -150527667 - B3 SINE B2 -12 204 4 1 708 286 326 42 14 chrX 16122893 16123036 -150527260 + B1F SINE Alu 3 149 0 1 708 243 0 0 0 chrX 16123287 16123314 -150526982 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 1 708 333 0 0 0 chrX 16123389 16123426 -150526870 + (TTA)n Simple_repeat Simple_repeat 1 37 0 1 708 258 373 26 63 chrX 16123495 16123684 -150526612 - MIRb SINE MIR -62 206 25 1 708 182 37 37 0 chrX 16123735 16123762 -150526534 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1 708 186 43 0 0 chrX 16124094 16124117 -150526179 + (A)n Simple_repeat Simple_repeat 1 23 0 1 708 640 297 221 7 chrX 16124842 16125127 -150525169 - MLT1F LTR MaLR 0 548 203 1 708 646 124 8 8 chrX 16125706 16125828 -150524468 + (TCTA)n Simple_repeat Simple_repeat 2 123 0 1 708 292 312 21 0 chrX 16125922 16126018 -150524278 - MLT1F LTR MaLR -354 215 118 1 708 3579 98 6 23 chrX 16126086 16126616 -150523680 + Lx3A LINE L1 6454 6974 -7 2 708 21 36 0 0 chrX 16126623 16126651 -150523645 + AT_rich Low_complexity Low_complexity 1 28 0 2 708 406 357 27 20 chrX 16127559 16127705 -150522591 - RSINE1 SINE B4 -9 156 10 2 708 375 228 55 82 chrX 16127715 16127731 -150522565 - B1F SINE Alu 0 149 136 2 708 864 288 27 92 chrX 16127731 16128133 -150522163 + MTE2b LTR MaLR 3 378 -1 2 708 375 228 55 82 chrX 16128133 16128226 -150522070 - B1F SINE Alu -14 135 43 2 708 359 286 40 30 chrX 16128645 16128746 -150521550 + PB1D10 SINE Alu 5 106 -11 2 708 222 91 0 0 chrX 16128751 16128784 -150521512 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2 708 626 218 7 14 chrX 16128935 16129079 -150521217 + Lx7 LINE L1 7520 7662 -34 2 708 474 18 0 0 chrX 16129677 16129732 -150520564 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 708 279 405 37 33 chrX 16130024 16130269 -150520027 - LTR16A LTR ERVL -103 348 103 2 708 702 236 28 7 chrX 16130452 16130593 -150519703 + ID_B1 SINE B4 81 224 0 2 708 289 307 58 18 chrX 16130594 16130700 -150519596 + PB1 SINE Alu 1 116 -1 2 708 201 39 0 0 chrX 16131090 16131116 -150519180 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 708 301 252 16 119 chrX 16131238 16131364 -150518932 - MLT1J1 LTR MaLR -296 148 36 2 708 863 170 158 11 chrX 16131489 16131673 -150518623 - B3 SINE B2 -3 213 3 2 708 354 267 15 77 chrX 16131686 16131816 -150518480 - BC1_Mm scRNA scRNA -30 122 1 2 708 777 199 20 0 chrX 16132130 16132276 -150518020 + B1_Mur4 SINE Alu 1 149 -1 2 708 973 93 13 0 chrX 16132454 16132605 -150517691 + (TC)n Simple_repeat Simple_repeat 1 153 0 2 708 894 50 0 0 chrX 16132621 16132741 -150517555 + (TG)n Simple_repeat Simple_repeat 1 120 0 2 708 448 349 40 35 chrX 16132979 16133205 -150517091 - L2a LINE L2 -1 3425 3199 2 708 242 282 14 14 chrX 16133266 16133338 -150516958 + ID4 SINE ID 12 83 0 2 708 252 340 75 0 chrX 16133342 16133436 -150516860 - L2 LINE L2 -3110 309 209 2 708 382 382 8 0 chrX 16133830 16133953 -150516343 + ID_B1 SINE B4 80 203 -21 2 708 797 312 20 131 chrX 16134093 16134583 -150515713 - RMER5 LTR ERV1 -28 506 71 2 708 339 242 0 0 chrX 16134689 16134751 -150515545 + ID4 SINE ID 5 66 -17 2 708 597 261 56 66 chrX 16134869 16135066 -150515230 + B2_Mm2 SINE B2 1 195 0 2 708 429 288 96 28 chrX 16135206 16135515 -150514781 + MER57C2 LTR ERV1 8 341 -70 2 708 895 278 39 28 chrX 16135740 16135995 -150514301 + MLT1F2 LTR MaLR 199 456 -104 2 708 1374 60 0 0 chrX 16136192 16136375 -150513921 - L1Md_A LINE L1 0 6582 6400 2 708 284 130 65 0 chrX 16136393 16136439 -150513857 - PB1D7 SINE Alu -64 56 8 2 708 2039 97 29 81 chrX 16136470 16136817 -150513479 - ORR1A4 LTR MaLR 0 329 1 2 708 788 337 83 4 chrX 16137214 16137467 -150512829 + B4A SINE B4 14 286 -6 2 708 288 0 0 0 chrX 16137614 16137646 -150512650 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2 708 1021 95 15 0 chrX 16137646 16137783 -150512513 - B1_Mus1 SINE Alu -9 139 1 2 708 201 100 60 0 chrX 16137907 16137957 -150512339 + T-rich Low_complexity Low_complexity 3 55 0 2 708 697 48 204 0 chrX 16137966 16138069 -150512227 - B1_Mus2 SINE Alu -2 145 22 2 708 594 349 14 0 chrX 16138105 16138320 -150511976 + ID_B1 SINE B4 1 218 -6 2 708 549 288 8 8 chrX 16138405 16138538 -150511758 + B1F1 SINE Alu 17 149 0 2 708 229 278 56 0 chrX 16138685 16138739 -150511557 + ID4_ SINE ID 6 62 -21 2 708 2426 96 2 83 chrX 16139209 16139606 -150510690 + RLTR8 LTR ERVK 1 365 0 2 708 1618 200 12 15 chrX 16140084 16140419 -150509877 - RLTR28 LTR ERVL 0 524 191 2 708 717 247 37 37 chrX 16140701 16140865 -150509431 - RSINE1 SINE B4 -1 164 1 2 708 303 49 0 0 chrX 16141013 16141054 -150509242 + (T)n Simple_repeat Simple_repeat 1 41 0 2 708 1151 82 0 0 chrX 16141054 16141201 -150509095 - B1_Mm SINE Alu 0 147 1 2 708 29 28 0 0 chrX 16141427 16141463 -150508833 + AT_rich Low_complexity Low_complexity 1 36 0 2 708 439 296 0 47 chrX 16141482 16141652 -150508644 + Lx7 LINE L1 7160 7321 -375 2 708 408 191 41 0 chrX 16142294 16142401 -150507895 + RMER10B LTR ERVL 1 117 -325 2 708 387 313 115 39 chrX 16143059 16143215 -150507081 - MER34A1 LTR ERV1 -360 227 60 2 708 307 250 45 107 chrX 16143648 16143668 -150506628 + B1_Mur1 SINE Alu 37 141 -8 2 708 374 286 0 11 chrX 16143668 16143760 -150506536 + ID_B1 SINE B4 126 216 -8 2 708 266 271 220 18 chrX 16143789 16143898 -150506398 + B1F2 SINE Alu 18 148 -1 2 708 586 200 24 8 chrX 16143898 16144024 -150506272 + Lx9 LINE L1 5853 5980 -1664 2 708 21 0 0 0 chrX 16144228 16144249 -150506047 + AT_rich Low_complexity Low_complexity 1 21 0 2 708 690 217 31 67 chrX 16144481 16144674 -150505622 - RLTR28B LTR ERVL -295 186 1 2 708 399 131 0 177 chrX 16144674 16144804 -150505492 + Lx9 LINE L1 7011 7117 -527 2 708 300 244 26 28 chrX 16144816 16144904 -150505392 - B4 SINE B4 -205 87 2 2 708 227 352 13 66 chrX 16144980 16145056 -150505240 - ID4 SINE ID -6 77 6 2 708 1931 220 21 26 chrX 16145108 16145528 -150504768 + MTD LTR MaLR 1 418 -1 2 708 370 351 43 29 chrX 16145649 16145787 -150504509 + RSINE1 SINE B4 4 143 -22 2 708 234 272 75 37 chrX 16146072 16146179 -150504117 - ORR1D1 LTR MaLR 0 374 264 2 708 3620 103 21 2 chrX 16146302 16146819 -150503477 - RMER19A LTR ERVK -21 716 190 2 708 5708 107 29 42 chrX 16146819 16146966 -150503330 + Lx2 LINE L1 5694 5842 -1155 2 708 1236 48 0 0 chrX 16146966 16147112 -150503184 + B1_Mus2 SINE Alu 2 147 0 2 708 5708 107 29 42 chrX 16147112 16147928 -150502368 + Lx2 LINE L1 5843 6645 -352 2 708 1169 143 27 36 chrX 16147926 16148151 -150502145 + Lx2 LINE L1 6775 6997 0 2 708 281 319 91 6 chrX 16149816 16149933 -150500363 + LTR16D LTR ERVL 148 269 -406 2 708 444 303 57 0 chrX 16150274 16150396 -150499900 - RSINE1 SINE B4 -31 134 6 2 708 266 318 80 26 chrX 16150398 16150511 -150499785 - PB1D7 SINE Alu -1 119 1 2 708 477 0 0 0 chrX 16150702 16150755 -150499541 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 708 700 96 239 42 chrX 16152058 16152200 -150498096 - RMER19A LTR ERVK -566 171 2 2 708 265 326 42 10 chrX 16152299 16152395 -150497901 - MLT1A1 LTR MaLR -279 129 31 2 708 613 185 109 0 chrX 16152428 16152547 -150497749 - B1_Mur4 SINE Alu -5 145 14 2 708 778 273 5 54 chrX 16152661 16152826 -150497470 + B3 SINE B2 2 165 -51 2 708 297 0 0 0 chrX 16152826 16152859 -150497437 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 708 778 273 5 54 chrX 16152859 16152898 -150497398 + B3 SINE B2 166 196 -20 2 708 279 379 95 69 chrX 16152888 16153277 -150497019 + LTR16A LTR ERVL 47 445 -6 2 708 260 323 140 10 chrX 16153413 16153513 -150496783 + PB1D9 SINE Alu 5 117 -3 2 708 590 282 0 43 chrX 16153520 16153672 -150496624 + RSINE1 SINE B4 10 156 -9 2 708 201 74 0 0 chrX 16153672 16153699 -150496597 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 708 23 33 0 0 chrX 16153718 16153748 -150496548 + AT_rich Low_complexity Low_complexity 1 30 0 2 708 3212 53 5 0 chrX 16153766 16154160 -150496136 + MTA_Mm LTR MaLR 1 396 0 2 708 7334 79 53 3 chrX 16154160 16155206 -150495090 + MTA_Mm-int LTR MaLR 1 1098 0 2 708 3101 64 8 0 chrX 16155206 16155599 -150494697 + MTA_Mm LTR MaLR 1 396 0 2 708 26982 89 5 10 chrX 16155686 16158052 -150492244 - L1_Mus1 LINE L1 -2 6565 4221 2 708 528 45 0 0 chrX 16158052 16158119 -150492177 + (TA)n Simple_repeat Simple_repeat 1 67 0 2 708 26982 113 6 14 chrX 16158119 16160852 -150489444 - L1_Mus1 LINE L1 -1663 4220 1502 2 708 351 0 0 0 chrX 16160998 16161037 -150489259 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 708 2089 166 65 0 chrX 16161127 16161494 -150488802 - ORR1B1 LTR MaLR 0 394 4 2 708 545 189 146 8 chrX 16161660 16161783 -150488513 - B1_Mus2 SINE Alu -7 140 1 2 708 726 273 44 88 chrX 16162025 16162272 -150488024 - RMER17C LTR ERVK -84 326 109 2 708 1221 106 0 0 chrX 16162272 16162452 -150487844 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 708 726 273 44 88 chrX 16162452 16162463 -150487833 - RMER17C LTR ERVK -302 108 90 2 708 458 33 17 0 chrX 16162463 16162523 -150487773 + (GA)n Simple_repeat Simple_repeat 2 62 0 2 708 726 273 44 88 chrX 16162523 16162604 -150487692 - RMER17C LTR ERVK -321 89 3 2 708 589 324 0 27 chrX 16162616 16162762 -150487534 + RSINE1 SINE B4 12 153 -12 2 708 988 92 14 7 chrX 16162810 16162953 -150487343 + B1_Mus2 SINE Alu 3 146 -1 2 708 235 288 68 14 chrX 16163432 16163506 -150486790 - ID2 SINE ID 0 83 6 2 708 368 336 23 15 chrX 16163526 16163659 -150486637 - B1F1 SINE Alu -15 134 1 2 708 212 143 0 0 chrX 16163842 16163877 -150486419 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 708 256 330 45 54 chrX 16164025 16164137 -150486159 + B1F2 SINE Alu 28 138 -11 2 708 1231 252 55 11 chrX 16164510 16164875 -150485421 - Lx8 LINE L1 -253 7220 6840 2 708 1752 258 122 14 chrX 16164875 16165430 -150484866 - Lx8 LINE L1 -762 6711 6097 2 708 539 299 0 0 chrX 16165620 16165737 -150484559 - ID_B1 SINE B4 -6 218 102 2 708 418 202 10 0 chrX 16165776 16165875 -150484421 + L1ME1 LINE L1 5505 5604 -560 2 708 934 195 49 24 chrX 16165913 16166118 -150484178 + MTD LTR MaLR 165 374 -45 2 708 458 326 58 55 chrX 16166146 16166326 -150483970 + MER34A LTR ERV1 34 207 -364 2 708 600 241 7 27 chrX 16166326 16166475 -150483821 + B1F SINE Alu 3 148 -1 2 708 458 326 58 55 chrX 16166475 16166619 -150483677 + MER34A LTR ERV1 208 358 -213 2 708 531 45 0 0 chrX 16166620 16166686 -150483610 + (TC)n Simple_repeat Simple_repeat 1 66 0 2 708 360 0 0 0 chrX 16166686 16166725 -150483571 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 708 238 297 92 33 chrX 16166727 16166880 -150483416 + MER34A LTR ERV1 419 580 -7 2 708 509 271 32 52 chrX 16166880 16167129 -150483167 + L1ME1 LINE L1 5602 5845 -334 2 708 1905 119 15 30 chrX 16167248 16167576 -150482720 - BGLII LTR ERVK -11 410 88 2 708 36674 9 0 1 chrX 16167576 16173364 -150476932 + L1Md_A LINE L1 1 5586 -297 3 708 9039 3 0 0 chrX 16173364 16174383 -150475913 + L1Md_A LINE L1 5587 6582 0 3 708 409 123 0 0 chrX 16174383 16174440 -150475856 - BGLII LTR ERVK -322 99 43 2 708 344 318 29 0 chrX 16174586 16174685 -150475611 - PB1D10 SINE Alu -10 110 3 3 708 633 106 0 0 chrX 16174712 16174816 -150475480 + (TA)n Simple_repeat Simple_repeat 1 104 0 3 708 306 300 35 84 chrX 16174945 16175087 -150475209 + ID_B1 SINE B4 6 140 -84 3 708 908 298 116 41 chrX 16175182 16175773 -150474523 - RMER13A LTR ERVK -221 737 2 3 708 2813 157 47 118 chrX 16175787 16176530 -150473766 - RMER6C LTR ERVK 0 690 1 3 708 30 45 0 0 chrX 16176543 16176587 -150473709 + AT_rich Low_complexity Low_complexity 1 44 0 3 708 315 287 9 82 chrX 16176794 16176904 -150473392 + PB1D10 SINE Alu 1 102 -15 3 708 822 87 7 14 chrX 16176925 16177065 -150473231 + (GAA)n Simple_repeat Simple_repeat 2 140 0 3 708 1412 274 45 52 chrX 16178133 16178333 -150471963 - RMER5 LTR ERV1 0 534 332 3 708 2173 133 19 6 chrX 16178333 16178696 -150471600 - RLTR9A LTR ERVK 0 368 1 3 708 1412 274 45 52 chrX 16178696 16179000 -150471296 - RMER5 LTR ERV1 -203 331 33 3 708 432 130 0 0 chrX 16179084 16179153 -150471143 + (TA)n Simple_repeat Simple_repeat 2 70 0 3 708 2349 117 60 18 chrX 16179252 16179636 -150470660 + RLTR9D LTR ERVK 1 400 -3 3 708 984 59 0 29 chrX 16179744 16179883 -150470413 - L1Md_F3 LINE L1 -15 6569 6435 3 708 1017 8 78 0 chrX 16179883 16180012 -150470284 + L1Md_F3 LINE L1 6280 6418 -166 3 708 300 127 0 0 chrX 16180060 16180115 -150470181 + (CAGA)n Simple_repeat Simple_repeat 2 56 0 3 708 402 301 19 10 chrX 16180212 16180316 -150469980 + PB1D10 SINE Alu 1 105 -12 3 708 231 235 20 0 chrX 16180354 16180405 -150469891 - MER34A1 LTR ERV1 -521 66 15 3 708 450 240 0 36 chrX 16181164 16181291 -150469005 - B1F1 SINE Alu -26 124 1 3 708 699 251 42 53 chrX 16181325 16181514 -150468782 + B3A SINE B2 6 192 -6 3 708 1032 140 9 115 chrX 16181563 16181789 -150468507 - RMER6A LTR ERVK 0 756 555 3 708 379 230 28 65 chrX 16181831 16181843 -150468453 - PB1D7 SINE Alu -1 119 109 3 708 314 0 49 0 chrX 16181843 16181884 -150468412 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 3 708 379 241 25 66 chrX 16181884 16181997 -150468299 - PB1D7 SINE Alu -12 108 3 3 708 230 247 128 12 chrX 16182003 16182089 -150468207 - LTR33 LTR ERVL -54 461 366 3 708 210 118 0 0 chrX 16183373 16183407 -150466889 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 708 640 267 123 54 chrX 16183440 16183701 -150466595 + B4 SINE B4 1 279 -13 3 708 698 164 54 20 chrX 16183796 16183945 -150466351 - MTD LTR MaLR 0 419 266 3 708 3544 46 26 19 chrX 16184017 16184483 -150465813 - MT2C_Mm LTR ERVL 0 475 7 3 708 301 315 0 0 chrX 16184502 16184575 -150465721 + ID4_ SINE ID 2 74 -9 3 708 312 27 0 0 chrX 16184581 16184618 -150465678 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 708 249 83 0 0 chrX 16184658 16184694 -150465602 + (TCTCTG)n Simple_repeat Simple_repeat 1 36 0 3 708 372 239 23 0 chrX 16184695 16184783 -150465513 - B1F1 SINE Alu -44 105 16 3 708 397 90 30 0 chrX 16184878 16184945 -150465351 + (TA)n Simple_repeat Simple_repeat 1 69 0 3 708 394 250 0 0 chrX 16184978 16185050 -150465246 + PB1D10 SINE Alu 1 72 -45 3 708 187 79 26 26 chrX 16185077 16185116 -150465180 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 708 1440 162 62 0 chrX 16185128 16185400 -150464896 - Lx9 LINE L1 -441 7203 6915 3 708 802 212 47 17 chrX 16185392 16185627 -150464669 + Lx9 LINE L1 7265 7506 -138 3 708 465 66 0 0 chrX 16185648 16185709 -150464587 + (TCTG)n Simple_repeat Simple_repeat 4 64 0 3 708 3051 29 37 3 chrX 16185709 16186084 -150464212 - MTA_Mm LTR MaLR -7 389 1 3 708 203 0 37 0 chrX 16186084 16186111 -150464185 + (TCTA)n Simple_repeat Simple_repeat 4 31 0 3 708 1901 77 19 30 chrX 16186424 16186692 -150463604 - L1_Mus1 LINE L1 -3 6564 6300 3 708 428 250 5 3 chrX 16186807 16186900 -150463396 - PB1D10 SINE Alu -35 114 21 3 708 231 277 11 108 chrX 16186825 16186918 -150463378 - MT2B2 LTR ERVL -333 251 168 3 708 1186 55 7 0 chrX 16186929 16187075 -150463221 - B1_Mus2 SINE Alu 0 147 1 3 708 306 0 0 0 chrX 16188741 16188775 -150461521 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 708 206 103 51 0 chrX 16188775 16188814 -150461482 + (CCAA)n Simple_repeat Simple_repeat 3 43 0 3 708 9780 112 12 19 chrX 16189853 16190007 -150460289 + L1_Mus2 LINE L1 4285 4438 -1445 3 708 2983 54 20 30 chrX 16190007 16190405 -150459891 + L1_Mus1 LINE L1 6174 6567 0 3 708 9780 112 12 19 chrX 16190405 16191224 -150459072 + L1_Mus2 LINE L1 4439 5235 -648 3 708 387 0 0 0 chrX 16191224 16191267 -150459029 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 708 9780 84 18 24 chrX 16191267 16192586 -150457710 + L1_Mus2 LINE L1 5236 6564 -2 3 708 605 258 9 184 chrX 16192589 16192807 -150457489 - B3A SINE B2 -8 187 8 3 708 1201 182 9 5 chrX 16192849 16193070 -150457226 + URR1A DNA MER1_type 5 226 0 3 708 619 173 0 22 chrX 16193160 16193296 -150457000 + CT-rich Low_complexity Low_complexity 3 135 0 3 708 288 0 0 0 chrX 16193296 16193328 -150456968 + (TTC)n Simple_repeat Simple_repeat 2 33 0 3 708 222 236 0 0 chrX 16193328 16193383 -150456913 + CT-rich Low_complexity Low_complexity 3 57 0 3 708 566 275 22 0 chrX 16193453 16193591 -150456705 - B1F SINE Alu -8 141 1 3 708 352 232 162 0 chrX 16193618 16193717 -150456579 - PB1D10 SINE Alu -2 115 1 3 708 626 213 0 18 chrX 16193877 16193987 -150456309 - B3 SINE B2 -103 113 6 3 708 487 121 126 179 chrX 16194301 16194452 -150455844 - B1_Mus1 SINE Alu -5 143 1 3 708 513 264 0 0 chrX 16194483 16194589 -150455707 + RSINE1 SINE B4 3 108 -57 3 708 24 53 0 0 chrX 16194594 16194632 -150455664 + AT_rich Low_complexity Low_complexity 1 38 0 3 708 468 0 0 0 chrX 16194921 16194973 -150455323 + (TA)n Simple_repeat Simple_repeat 1 52 0 3 708 373 282 76 10 chrX 16195057 16195176 -150455120 - B1F1 SINE Alu -31 119 2 3 708 546 16 0 0 chrX 16198285 16198348 -150451948 + (TTCC)n Simple_repeat Simple_repeat 1 63 0 3 708 945 255 5 18 chrX 16198644 16198864 -150451432 - ID_B1 SINE B4 -5 219 3 3 708 444 262 10 10 chrX 16199071 16199175 -150451121 - ID_B1 SINE B4 -10 214 111 3 708 548 246 22 58 chrX 16199624 16199762 -150450534 - ID_B1 SINE B4 0 224 92 3 708 370 276 23 0 chrX 16199685 16199772 -150450524 - PB1D10 SINE Alu -28 89 1 3 708 340 317 57 14 chrX 16200632 16200773 -150449523 - B1F1 SINE Alu 0 149 3 3 708 210 270 39 39 chrX 16200788 16200865 -150449431 - B4 SINE B4 -205 87 11 3 708 824 40 0 0 chrX 16201738 16201839 -150448457 + B1_Mm SINE Alu 36 136 -11 3 708 253 0 54 0 chrX 16201839 16201876 -150448420 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 708 298 333 0 49 chrX 16202673 16202755 -150447541 + ID4_ SINE ID 6 83 0 3 708 868 241 27 40 chrX 16202761 16202986 -150447310 + ID_B1 SINE B4 3 224 0 3 708 1142 58 0 0 chrX 16203513 16203651 -150446645 + B1_Mus1 SINE Alu 2 139 -9 3 708 456 51 0 0 chrX 16203933 16203992 -150446304 + (TG)n Simple_repeat Simple_repeat 1 59 0 3 708 378 309 0 11 chrX 16204038 16204133 -150446163 - RSINE1 SINE B4 -69 96 3 3 708 21 71 0 0 chrX 16204133 16204175 -150446121 + AT_rich Low_complexity Low_complexity 1 42 0 3 708 473 265 93 44 chrX 16204175 16204380 -150445916 - B3 SINE B2 0 216 2 3 708 257 391 42 71 chrX 16204437 16204605 -150445691 + B4A SINE B4 58 220 -72 3 708 580 329 7 0 chrX 16204468 16204611 -150445685 + B1F SINE Alu 6 149 0 3 708 648 293 28 96 chrX 16204614 16204905 -150445391 + B4A SINE B4 4 274 -18 3 708 653 301 21 0 chrX 16205195 16205338 -150444958 + ID_B1 SINE B4 73 218 -6 3 708 291 264 131 54 chrX 16205219 16205387 -150444909 - YREP_Mm Unknown Unknown -1512 300 120 3 708 749 210 75 42 chrX 16205471 16205685 -150444611 - ID_B1 SINE B4 0 224 4 3 708 25 31 0 0 chrX 16205768 16205800 -150444496 + AT_rich Low_complexity Low_complexity 1 32 0 3 708 432 55 0 0 chrX 16206525 16206580 -150443716 + (TTCA)n Simple_repeat Simple_repeat 1 55 0 3 708 228 289 231 11 chrX 16207906 16207997 -150442299 + PB1D9 SINE Alu 10 120 0 3 708 290 117 33 0 chrX 16208020 16208080 -150442216 + (CCAA)n Simple_repeat Simple_repeat 2 63 0 3 708 321 239 0 15 chrX 16208280 16208348 -150441948 + PB1D10 SINE Alu 24 90 -27 3 708 376 340 10 0 chrX 16208586 16208689 -150441607 - PB1D10 SINE Alu -13 104 1 3 708 575 214 0 25 chrX 16208887 16209007 -150441289 + PB1D10 SINE Alu 1 117 0 3 708 726 267 103 24 chrX 16209204 16209457 -150440839 - MER2 DNA MER2_type 0 345 73 3 708 415 264 15 52 chrX 16209472 16209608 -150440688 - ID_B1 SINE B4 -6 218 88 3 708 1498 265 74 26 chrX 16210173 16210821 -150439475 + L1MC3 LINE L1 6617 7295 -490 3 708 514 285 44 0 chrX 16211559 16211696 -150438600 - B1F SINE Alu -5 144 2 3 708 518 79 13 0 chrX 16211901 16211977 -150438319 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 708 3674 114 16 35 chrX 16211978 16212774 -150437522 + L1_Mus3 LINE L1 2292 2993 -2890 3 708 7412 92 5 3 chrX 16212780 16214181 -150436115 + L1_Mus3 LINE L1 5228 6633 -5 3 708 459 0 0 0 chrX 16214530 16214581 -150435715 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 708 414 0 0 0 chrX 16214581 16214626 -150435670 + (GA)n Simple_repeat Simple_repeat 1 46 0 3 708 482 337 169 31 chrX 16214876 16215225 -150435071 + L2 LINE L2 2590 2986 -433 3 708 31 0 0 0 chrX 16216409 16216440 -150433856 + AT_rich Low_complexity Low_complexity 1 31 0 3 708 807 296 34 58 chrX 16216545 16217132 -150433164 - L1MA4A LINE L1 -277 6023 5423 3 708 233 179 29 43 chrX 16217278 16217348 -150432948 - Lx7 LINE L1 -6 7690 7622 4 708 219 36 0 0 chrX 16217435 16217463 -150432833 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 708 566 267 139 58 chrX 16217467 16217761 -150432535 - Lx7 LINE L1 -280 7416 7099 4 708 1114 244 46 86 chrX 16217924 16218131 -150432165 - ORR1D1 LTR MaLR -2 372 167 4 708 423 0 0 0 chrX 16218131 16218178 -150432118 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 708 585 0 0 0 chrX 16218181 16218246 -150432050 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 708 1114 244 46 86 chrX 16218246 16218406 -150431890 - ORR1D1 LTR MaLR -208 166 16 4 708 5646 220 24 7 chrX 16218403 16219532 -150430764 - ORR1D1-int LTR MaLR -115 1255 108 4 708 1305 208 151 10 chrX 16219535 16219846 -150430450 + ORR1D1 LTR MaLR 20 374 0 4 708 420 37 0 0 chrX 16219958 16220012 -150430284 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 708 24 32 0 0 chrX 16220791 16220822 -150429474 + AT_rich Low_complexity Low_complexity 1 31 0 4 708 265 313 8 108 chrX 16221127 16221256 -150429040 - MIRb SINE MIR -50 218 103 4 708 189 0 0 0 chrX 16221616 16221637 -150428659 + (C)n Simple_repeat Simple_repeat 1 21 0 4 708 364 275 25 0 chrX 16221646 16221726 -150428570 - B4A SINE B4 -99 193 112 4 708 206 95 0 23 chrX 16221812 16221855 -150428441 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 4 708 21 0 0 0 chrX 16222695 16222716 -150427580 + AT_rich Low_complexity Low_complexity 1 21 0 4 708 333 0 0 0 chrX 16222783 16222820 -150427476 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 708 393 156 18 6 chrX 16223101 16223183 -150427113 - L1MB3 LINE L1 -48 6135 6052 4 708 960 126 0 0 chrX 16223346 16223497 -150426799 + (TCTA)n Simple_repeat Simple_repeat 1 151 0 4 708 217 245 54 54 chrX 16223518 16223574 -150426722 - PB1D7 SINE Alu -64 56 1 4 708 384 247 0 13 chrX 16223877 16223955 -150426341 - Lx8 LINE L1 -232 7241 7165 4 708 287 349 0 0 chrX 16223966 16224052 -150426244 + Lx8 LINE L1 7243 7328 -145 4 708 190 75 24 48 chrX 16224177 16224219 -150426077 + (GAAAA)n Simple_repeat Simple_repeat 5 45 0 4 708 252 77 0 0 chrX 16225545 16225584 -150424712 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 708 359 281 78 7 chrX 16225945 16226099 -150424197 - MER103 DNA DNA 0 166 2 4 708 345 262 19 68 chrX 16227165 16227327 -150422969 - MER20 DNA MER1_type -27 192 5 4 708 279 102 0 181 chrX 16227942 16228014 -150422282 - L1_Mm LINE L1 -452 5431 5373 4 708 2087 153 17 0 chrX 16228016 16228368 -150421928 + Lx LINE L1 6297 6654 0 4 708 626 47 12 0 chrX 16228436 16228522 -150421774 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 4 708 239 333 0 70 chrX 16228860 16228931 -150421365 + B4 SINE B4 90 155 -137 4 708 517 241 62 28 chrX 16228975 16229120 -150421176 + L1MB7 LINE L1 5447 5596 -588 4 708 512 250 49 0 chrX 16229127 16229291 -150421005 + L1MB7 LINE L1 5995 6166 -18 4 708 7234 59 2 10 chrX 16230522 16231476 -150418820 - L1_Mus1 LINE L1 0 6567 5650 4 708 193 304 29 14 chrX 16231631 16231701 -150418595 + L3 LINE CR1 6 76 -4413 4 708 747 199 0 28 chrX 16232028 16232173 -150418123 + B1_Mur1 SINE Alu 2 142 -7 4 708 477 267 21 36 chrX 16232645 16232785 -150417511 + MIRb SINE MIR 117 254 -14 4 708 1002 296 104 0 chrX 16233199 16233496 -150416800 - MER2 DNA MER2_type -1 344 17 4 708 687 327 63 7 chrX 16234535 16234806 -150415490 + B4A SINE B4 1 286 -6 4 708 182 91 30 0 chrX 16234861 16234894 -150415402 + (TCCC)n Simple_repeat Simple_repeat 1 34 0 4 708 307 216 80 13 chrX 16234988 16235063 -150415233 - ID4_ SINE ID 0 83 4 4 708 1832 221 24 43 chrX 16235089 16235509 -150414787 - Lx5 LINE L1 -3 7047 6636 4 708 451 243 19 9 chrX 16235514 16235622 -150414674 - PB1D10 SINE Alu -8 109 1 4 708 281 365 99 25 chrX 16235866 16236068 -150414228 - MIRb SINE MIR -35 233 17 4 708 297 100 0 0 chrX 16236077 16236127 -150414169 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 708 574 289 65 12 chrX 16236927 16237095 -150413201 + B3A SINE B2 3 179 -19 4 708 24 32 0 0 chrX 16237192 16237223 -150413073 + AT_rich Low_complexity Low_complexity 1 31 0 4 708 522 0 0 0 chrX 16237366 16237424 -150412872 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 708 235 354 34 20 chrX 16237509 16237656 -150412640 - L2a LINE L2 -10 3416 3268 4 708 195 42 0 0 chrX 16239189 16239213 -150411083 + (TCTTG)n Simple_repeat Simple_repeat 5 28 0 4 708 217 299 12 49 chrX 16239314 16239395 -150410901 - RSINE1 SINE B4 -2 163 86 4 708 22 0 0 0 chrX 16240669 16240691 -150409605 + AT_rich Low_complexity Low_complexity 1 22 0 4 708 1543 214 107 11 chrX 16242073 16242354 -150407942 - MTD LTR MaLR 0 419 101 4 708 1247 110 11 0 chrX 16242354 16242545 -150407751 + B2_Mm1t SINE B2 1 193 0 4 708 1543 214 107 11 chrX 16242545 16242645 -150407651 - MTD LTR MaLR -319 100 1 4 708 186 103 0 0 chrX 16243253 16243282 -150407014 + (T)n Simple_repeat Simple_repeat 1 29 0 4 708 39675 25 3 7 chrX 16243284 16249475 -150400821 - L1Md_T LINE L1 0 6582 418 4 708 25 0 0 0 chrX 16251270 16251295 -150399001 + AT_rich Low_complexity Low_complexity 1 25 0 4 708 786 256 35 0 chrX 16251296 16251533 -150398763 - L1MA6 LINE L1 -33 6279 6025 4 708 586 324 105 119 chrX 16251565 16251887 -150398409 + MER34A1 LTR ERV1 85 418 -169 4 708 4465 68 7 5 chrX 16251887 16252474 -150397822 - L1Md_F2 LINE L1 -12 6570 5983 4 708 586 324 105 119 chrX 16252474 16252589 -150397707 + MER34A1 LTR ERV1 419 516 -71 4 708 256 392 0 0 chrX 16252753 16252832 -150397464 - ID_B1 SINE B4 -70 154 76 4 709 21 0 0 0 chrX 16253164 16253185 -150397111 + AT_rich Low_complexity Low_complexity 1 21 0 4 709 22 35 0 0 chrX 16253319 16253348 -150396948 + AT_rich Low_complexity Low_complexity 1 29 0 4 709 21 0 0 0 chrX 16253660 16253681 -150396615 + AT_rich Low_complexity Low_complexity 1 21 0 4 709 312 120 0 0 chrX 16255107 16255157 -150395139 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 709 283 280 0 15 chrX 16255600 16255678 -150394618 - MER5A1 DNA MER1_type -54 112 36 4 709 396 209 0 0 chrX 16255801 16255868 -150394428 + tRNA-Ala-GCA tRNA tRNA 1 67 -8 4 709 313 333 0 36 chrX 16255868 16255880 -150394416 + ID4_ SINE ID 7 82 -1 4 709 21 57 0 0 chrX 16256030 16256065 -150394231 + AT_rich Low_complexity Low_complexity 1 35 0 4 709 2168 160 48 45 chrX 16256180 16256600 -150393696 - MTC LTR MaLR 0 421 1 4 709 27 29 0 0 chrX 16257228 16257262 -150393034 + AT_rich Low_complexity Low_complexity 1 34 0 4 709 470 229 152 0 chrX 16257589 16257707 -150392589 + B1F2 SINE Alu 1 136 -13 4 709 232 254 0 16 chrX 16259013 16259077 -150391219 - ID4 SINE ID -16 67 5 4 709 568 314 181 59 chrX 16259666 16260200 -150390096 + LTR87 LTR ERVL? 15 613 -11 4 709 244 320 0 0 chrX 16261256 16261331 -150388965 - ID4_ SINE ID -7 76 2 4 709 1547 274 38 13 chrX 16261437 16261959 -150388337 - L1MA5 LINE L1 -7 6293 5759 4 709 2112 28 0 0 chrX 16264007 16264257 -150386039 - L1Md_F3 LINE L1 -567 6017 5768 4 709 2149 30 23 0 chrX 16264257 16264523 -150385773 + L1Md_F3 LINE L1 6313 6584 0 4 709 261 295 68 30 chrX 16265137 16265270 -150385026 + MIR3 SINE MIR 31 168 -40 4 709 978 134 58 12 chrX 16265918 16266091 -150384205 + Lx4A LINE L1 6877 7057 -1 4 709 22 0 0 0 chrX 16266096 16266118 -150384178 + AT_rich Low_complexity Low_complexity 1 22 0 4 709 315 0 0 0 chrX 16266890 16266925 -150383371 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 709 3423 38 35 2 chrX 16267265 16267687 -150382609 - RLTR10C LTR ERVK 0 436 1 4 709 42036 39 3 11 chrX 16267687 16272754 -150377542 - MMERVK10C-int LTR ERVK 0 7581 2552 4 709 400 117 6 58 chrX 16272760 16272888 -150377408 - MMERVK10C-int LTR ERVK -5634 1947 1721 4 709 321 268 36 93 chrX 16272890 16273030 -150377266 - MMERVK10C-int LTR ERVK -4587 819 688 4 709 687 221 101 95 chrX 16273016 16273358 -150376938 - MMERVK10C-int LTR ERVK -4956 450 219 4 709 751 197 20 45 chrX 16273348 16273631 -150376665 - MMERVK10C-int LTR ERVK -6629 952 729 4 709 2525 90 0 3 chrX 16273629 16273962 -150376334 - MMERVK10C-int LTR ERVK -7238 343 12 4 709 3050 44 16 0 chrX 16273963 16274350 -150375946 - RLTR10C LTR ERVK -43 393 1 4 709 236 245 177 21 chrX 16274542 16274638 -150375658 - L2b LINE L2 -6 3369 3259 4 709 747 133 0 4 chrX 16274755 16274885 -150375411 - L1_Mus1 LINE L1 -35 6549 6420 4 709 3183 138 7 42 chrX 16274884 16275082 -150375214 - L1VL4 LINE L1 -5535 767 586 4 709 1359 50 55 0 chrX 16275082 16275263 -150375033 - L1Md_F3 LINE L1 -14 6570 6380 4 709 5230 54 10 3 chrX 16275266 16275937 -150374359 - L1Md_F3 LINE L1 0 6584 5909 4 709 3183 138 7 42 chrX 16275937 16276278 -150374018 - L1VL4 LINE L1 -5717 585 243 4 709 230 347 28 0 chrX 16276542 16276614 -150373682 - ID SINE ID -149 75 2 4 709 636 280 0 8 chrX 16276638 16276771 -150373525 + RSINE1 SINE B4 8 139 -26 4 709 271 0 25 25 chrX 16276810 16276850 -150373446 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 709 302 208 2 0 chrX 16277388 16277456 -150372840 + L1M2 LINE L1 5423 5491 -821 4 709 23 33 0 0 chrX 16278114 16278144 -150372152 + AT_rich Low_complexity Low_complexity 1 30 0 4 709 780 68 17 0 chrX 16279051 16279169 -150371127 + L1_Mus1 LINE L1 6443 6562 -5 4 709 447 353 72 64 chrX 16279379 16279724 -150370572 - ORR1E LTR MaLR -11 348 1 4 709 2339 124 137 19 chrX 16280096 16280572 -150369724 - RLTR47_MM LTR ERV1 0 532 1 4 709 216 0 0 0 chrX 16280789 16280813 -150369483 + (T)n Simple_repeat Simple_repeat 1 24 0 4 709 432 0 0 0 chrX 16281121 16281169 -150369127 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 709 539 285 80 7 chrX 16281169 16281307 -150368989 - B3A SINE B2 -50 148 1 4 709 461 209 15 51 chrX 16281311 16281425 -150368871 - PB1D10 SINE Alu 0 120 2 4 709 333 278 52 0 chrX 16281815 16281912 -150368384 + PB1D10 SINE Alu 3 104 -13 4 709 3706 136 13 25 chrX 16282403 16283012 -150367284 - Lx LINE L1 0 6654 6053 4 709 603 260 182 27 chrX 16283262 16283487 -150366809 - RMER15 LTR ERVL -16 559 300 4 709 1673 90 4 16 chrX 16285031 16285279 -150365017 + L1_Mus4 LINE L1 6388 6632 -4 5 709 21 0 0 0 chrX 16285405 16285426 -150364870 + AT_rich Low_complexity Low_complexity 1 21 0 5 709 605 324 78 8 chrX 16285656 16285899 -150364397 - Lx9 LINE L1 -1067 6577 6318 5 709 331 319 0 6 chrX 16287985 16288097 -150362199 - ID4 SINE ID -35 117 8 5 709 22 0 0 0 chrX 16288108 16288130 -150362166 + AT_rich Low_complexity Low_complexity 1 22 0 5 709 322 298 104 73 chrX 16288783 16288975 -150361321 - B3A SINE B2 0 198 1 5 709 208 93 0 65 chrX 16289058 16289104 -150361192 + G-rich Low_complexity Low_complexity 2 44 0 5 709 1341 46 0 0 chrX 16289106 16289279 -150361017 + (GGGAGA)n Simple_repeat Simple_repeat 5 177 0 5 709 648 297 13 0 chrX 16289279 16289434 -150360862 - B3A SINE B2 -41 157 1 5 709 1499 58 5 0 chrX 16290160 16290350 -150359946 - B2_Mm1t SINE B2 -1 192 2 5 709 318 321 37 0 chrX 16290448 16290529 -150359767 - ID SINE ID -139 85 2 5 709 748 382 117 27 chrX 16290752 16291161 -150359135 + LTR16A LTR ERVL 1 446 -5 5 709 295 320 74 34 chrX 16291201 16291376 -150358920 - MIRb SINE MIR -27 241 60 5 709 273 287 67 47 chrX 16291728 16291878 -150358418 + ORR1C2 LTR MaLR 83 235 -149 5 709 689 302 47 0 chrX 16293712 16293904 -150356392 - MER2 DNA MER2_type -1 344 144 5 709 327 327 18 45 chrX 16294111 16294223 -150356073 - PB1D10 SINE Alu -6 111 3 5 709 240 299 14 43 chrX 16294570 16294640 -150355656 + ID4_ SINE ID 3 70 -13 5 709 349 120 0 0 chrX 16294702 16294752 -150355544 + L1_Mus1 LINE L1 5956 6005 -562 5 709 1446 40 0 6 chrX 16294749 16294923 -150355373 + L1_Mus1 LINE L1 6293 6465 -102 5 709 343 296 26 52 chrX 16295588 16295741 -150354555 - B1F SINE Alu 0 149 1 5 709 256 269 108 0 chrX 16295877 16295970 -150354326 + MER5A DNA MER1_type 59 161 -28 5 709 939 236 0 28 chrX 16296274 16296488 -150353808 + B3 SINE B2 3 210 -6 5 709 8015 62 1 1 chrX 16296916 16298309 -150351987 - L1_Mus1 LINE L1 0 6567 5176 5 709 533 318 47 16 chrX 16298314 16298506 -150351790 - Lx8 LINE L1 -130 7343 7146 5 709 427 286 0 0 chrX 16298577 16298591 -150351705 + ID_B1 SINE B4 86 190 -34 5 709 492 176 33 0 chrX 16298591 16298682 -150351614 + B1F SINE Alu 19 112 -37 5 709 514 340 32 7 chrX 16298770 16298924 -150351372 + B3A SINE B2 2 159 -39 5 709 325 291 0 12 chrX 16299226 16299306 -150350990 - L2a LINE L2 -50 3376 3298 5 709 207 100 0 0 chrX 16299841 16299871 -150350425 + (GAGAA)n Simple_repeat Simple_repeat 4 33 0 5 709 325 299 11 0 chrX 16299956 16300043 -150350253 + GA-rich Low_complexity Low_complexity 2 89 0 5 709 364 278 87 36 chrX 16300592 16300730 -150349566 + MLT1A1 LTR MaLR 253 397 -11 5 709 5056 68 15 12 chrX 16300927 16301611 -150348685 + L1_Mus2 LINE L1 5881 6566 0 5 709 26 0 0 0 chrX 16301611 16301637 -150348659 + AT_rich Low_complexity Low_complexity 1 26 0 5 709 592 262 162 30 chrX 16302083 16302280 -150348016 + ID_B1 SINE B4 2 224 0 5 709 256 400 0 0 chrX 16302405 16302490 -150347806 - AluG_3 SINE Alu -89 222 138 5 709 288 298 101 60 chrX 16302691 16302760 -150347536 + MER2 DNA MER2_type 1 82 -263 5 709 646 254 7 0 chrX 16302760 16302902 -150347394 + B1_Mur2 SINE Alu 4 146 -3 5 709 288 298 101 60 chrX 16302902 16303000 -150347296 + MER2 DNA MER2_type 83 175 -170 5 709 553 307 35 50 chrX 16303008 16303210 -150347086 + MER2B DNA MER2_type 147 345 0 5 709 6445 117 60 4 chrX 16303387 16304422 -150345874 + Lx2 LINE L1 5904 6996 -1 5 709 552 111 8 41 chrX 16304574 16304696 -150345600 - L1Md_F3 LINE L1 -3 6581 6464 5 709 212 244 0 118 chrX 16306324 16306375 -150343921 + ID4_ SINE ID 36 80 -3 5 709 330 182 65 0 chrX 16306593 16306670 -150343626 + HAL1-3A_ME LINE L1 1946 2027 -831 5 709 489 244 152 8 chrX 16306674 16306806 -150343490 - RSINE1 SINE B4 -12 153 3 5 709 232 25 49 24 chrX 16306879 16306920 -150343376 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 5 709 895 133 0 0 chrX 16306943 16307071 -150343225 - B2_Mm2 SINE B2 -66 129 2 5 709 636 308 84 5 chrX 16307743 16307945 -150342351 - MER2 DNA MER2_type -127 218 1 5 709 372 309 50 0 chrX 16308269 16308408 -150341888 - MER3 DNA MER1_type -30 179 34 5 709 214 320 40 0 chrX 16308547 16308558 -150341738 - ID SINE ID -141 83 6 5 709 225 312 31 0 chrX 16308558 16308622 -150341674 - ID4 SINE ID -12 71 6 5 709 245 368 0 0 chrX 16308816 16308884 -150341412 + PB1D10 SINE Alu 1 68 -49 5 709 1341 24 12 0 chrX 16308925 16309091 -150341205 - L1_Mus1 LINE L1 -1 6566 6399 5 709 288 0 0 0 chrX 16309519 16309551 -150340745 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 709 242 349 54 34 chrX 16309617 16309822 -150340474 + L2a LINE L2 3105 3313 -113 5 709 6620 69 12 10 chrX 16309830 16310718 -150339578 + L1_Mus3 LINE L1 5749 6638 0 5 709 529 173 39 131 chrX 16310864 16311017 -150339279 - Lx4B LINE L1 -4 7054 6916 5 709 2172 66 7 3 chrX 16311458 16311760 -150338536 + L1_Mus2 LINE L1 6264 6566 0 5 709 3282 59 0 0 chrX 16312197 16312602 -150337694 + L1_Mus1 LINE L1 6163 6567 0 5 709 237 146 20 40 chrX 16312734 16312784 -150337512 + CT-rich Low_complexity Low_complexity 3 51 0 5 709 696 328 0 6 chrX 16313603 16313784 -150336512 - B3A SINE B2 -16 182 3 5 709 250 234 74 9 chrX 16313896 16314004 -150336292 - MER44A DNA MER2_type -124 215 101 5 709 272 120 20 0 chrX 16315347 16315397 -150334899 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 709 461 261 86 31 chrX 16316584 16316746 -150333550 - MER44A DNA MER2_type -158 181 11 5 709 185 319 98 32 chrX 16319316 16319439 -150330857 - MIRc SINE MIR -36 232 102 5 709 216 0 0 0 chrX 16319652 16319676 -150330620 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 709 258 106 0 0 chrX 16319857 16319904 -150330392 + (A)n Simple_repeat Simple_repeat 1 47 0 5 709 510 17 0 0 chrX 16320049 16320108 -150330188 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 709 553 329 0 6 chrX 16320552 16320720 -150329576 + Charlie1a DNA MER1_type 1039 1205 -250 5 709 450 0 0 0 chrX 16320838 16320888 -150329408 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 709 1229 264 20 43 chrX 16320987 16321339 -150328957 - Lx7 LINE L1 -424 7272 6929 5 709 1677 67 13 4 chrX 16321337 16321576 -150328720 - Lx2 LINE L1 -461 5842 5597 5 709 1571 261 40 56 chrX 16321723 16321879 -150328417 - Lx7 LINE L1 -761 6935 6779 5 709 795 115 14 0 chrX 16321879 16322018 -150328278 + Lx2A1 LINE L1 6867 7007 -1 5 709 1571 261 40 56 chrX 16322018 16322380 -150327916 - Lx7 LINE L1 -918 6778 6425 5 709 333 242 112 15 chrX 16322380 16322514 -150327782 + Charlie1a DNA MER1_type 1275 1421 -34 5 709 670 226 196 11 chrX 16322682 16322715 -150327581 - B3 SINE B2 -4 212 166 5 709 210 37 0 0 chrX 16322715 16322742 -150327554 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 709 670 226 196 11 chrX 16322742 16322887 -150327409 - B3 SINE B2 -51 165 2 5 709 474 18 0 0 chrX 16322898 16322953 -150327343 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 709 444 19 0 0 chrX 16322953 16323005 -150327291 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 709 358 332 94 78 chrX 16324911 16325231 -150325065 - L2a LINE L2 -43 3383 3059 5 709 255 370 0 0 chrX 16325865 16325938 -150324358 + ID4 SINE ID 2 74 -9 5 709 3071 54 0 5 chrX 16326720 16327110 -150323186 + L1Md_F2 LINE L1 6183 6570 -12 5 709 2663 35 32 12 chrX 16327178 16327523 -150322773 + L1Md_F3 LINE L1 6233 6584 0 5 709 214 235 73 0 chrX 16327585 16327673 -150322623 + (CAGAGA)n Simple_repeat Simple_repeat 1 94 0 5 709 329 344 11 0 chrX 16328177 16328270 -150322026 - MER2 DNA MER2_type -12 333 240 5 709 228 323 108 69 chrX 16328521 16328770 -150321526 + L2a LINE L2 2970 3226 -149 5 709 220 220 0 0 chrX 16329143 16329193 -150321103 + T-rich Low_complexity Low_complexity 1 50 0 5 709 288 311 50 16 chrX 16329263 16329384 -150320912 + L2a LINE L2 3240 3364 -62 5 709 806 295 60 30 chrX 16329669 16330071 -150320225 + Lx9 LINE L1 7228 7641 -3 5 709 402 351 67 13 chrX 16330107 16330257 -150320039 + RSINE1 SINE B4 8 165 0 5 709 230 330 62 93 chrX 16330257 16330300 -150319996 + B2_Mm1t SINE B2 7 193 0 5 709 316 241 53 0 chrX 16330313 16330483 -150319813 + (TA)n Simple_repeat Simple_repeat 1 179 0 5 709 643 263 112 35 chrX 16330575 16330772 -150319524 - B3 SINE B2 -4 212 1 5 709 399 348 45 95 chrX 16330829 16331166 -150319130 - ORR1E LTR MaLR 0 359 40 5 709 378 0 0 0 chrX 16331195 16331237 -150319059 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 709 300 240 8 16 chrX 16331240 16331363 -150318933 + (TA)n Simple_repeat Simple_repeat 2 123 0 5 709 381 102 0 0 chrX 16331363 16331422 -150318874 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 709 719 361 82 56 chrX 16331527 16332049 -150318247 - MLT1H1 LTR MaLR -12 543 8 5 709 371 355 29 0 chrX 16332110 16332248 -150318048 + B1F1 SINE Alu 1 142 -7 5 709 261 352 0 11 chrX 16332258 16332347 -150317949 + B3 SINE B2 1 88 -128 5 709 1033 170 82 5 chrX 16332341 16332536 -150317760 + ORR1B1 LTR MaLR 185 394 0 5 709 218 256 0 0 chrX 16332578 16332621 -150317675 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 709 451 250 141 0 chrX 16332641 16332769 -150317527 + B1_Mur3 SINE Alu 1 146 -3 5 709 405 0 0 0 chrX 16332769 16332814 -150317482 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 5 709 26 0 0 0 chrX 16333253 16333279 -150317017 + AT_rich Low_complexity Low_complexity 1 26 0 5 709 279 198 111 44 chrX 16333664 16333754 -150316542 - MLT1A1 LTR MaLR 0 408 313 5 709 429 54 0 0 chrX 16333912 16333968 -150316328 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 709 493 271 116 20 chrX 16333977 16334124 -150316172 - RSINE1 SINE B4 -3 162 2 5 709 213 337 152 12 chrX 16334309 16334480 -150315816 + MIR SINE MIR 54 248 -14 6 709 7610 78 6 1 chrX 16334925 16336433 -150313863 + L1_Mus1 LINE L1 5054 6567 0 6 709 238 312 88 31 chrX 16337068 16337227 -150313069 + MER33 DNA MER1_type 5 172 -152 6 709 180 0 0 0 chrX 16337249 16337269 -150313027 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 709 1071 84 0 7 chrX 16337269 16337412 -150312884 - B1_Mus1 SINE Alu -5 143 2 6 709 490 137 88 0 chrX 16337472 16337574 -150312722 + Lx9 LINE L1 7512 7622 -22 6 709 802 241 46 0 chrX 16337593 16337788 -150312508 - B3 SINE B2 -9 207 4 6 709 405 0 0 0 chrX 16337906 16337951 -150312345 + (TAA)n Simple_repeat Simple_repeat 3 47 0 6 709 255 216 40 20 chrX 16337951 16338050 -150312246 + (TA)n Simple_repeat Simple_repeat 2 102 0 6 709 234 0 0 0 chrX 16338260 16338286 -150312010 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 709 541 260 95 14 chrX 16338549 16338697 -150311599 + B3A SINE B2 15 174 -24 6 709 1014 177 31 152 chrX 16338763 16339117 -150311179 + RLTRETN_Mm LTR ERVK 12 322 0 6 709 332 153 0 12 chrX 16339165 16339251 -150311045 + (CAGA)n Simple_repeat Simple_repeat 4 88 0 6 709 1343 257 14 20 chrX 16339863 16340208 -150310088 - Lx9 LINE L1 -660 6984 6642 6 709 21 57 0 0 chrX 16342408 16342443 -150307853 + AT_rich Low_complexity Low_complexity 1 35 0 6 709 991 235 46 57 chrX 16342741 16343021 -150307275 + Lx6 LINE L1 7180 7456 -4 6 709 264 245 0 36 chrX 16344433 16344488 -150305808 - ID4_ SINE ID -3 80 28 6 709 252 320 12 49 chrX 16344488 16344515 -150305781 - ID SINE ID -141 83 5 6 709 236 305 0 0 chrX 16344528 16344587 -150305709 - ID4 SINE ID -24 59 1 6 709 441 272 0 17 chrX 16344713 16344829 -150305467 + PB1D10 SINE Alu 4 117 0 6 709 757 240 14 73 chrX 16345884 16346104 -150304192 + L1MA9 LINE L1 5821 6027 -285 6 709 5804 131 47 7 chrX 16346104 16347025 -150303271 + RMER17B LTR ERVK 1 958 0 6 709 739 258 24 64 chrX 16347025 16347053 -150303243 + L1MA9 LINE L1 6028 6058 -233 6 709 312 37 0 53 chrX 16347082 16347139 -150303157 + (TTTTTG)n Simple_repeat Simple_repeat 1 54 0 6 709 1070 109 0 0 chrX 16347140 16347287 -150303009 - B1_Mus1 SINE Alu 0 148 2 6 709 339 238 162 28 chrX 16347288 16347504 -150302792 + L1MA9 LINE L1 6047 6291 0 6 709 231 88 0 0 chrX 16347831 16347865 -150302431 + (ATGGTG)n Simple_repeat Simple_repeat 5 38 0 6 709 222 184 20 20 chrX 16347868 16347918 -150302378 + GA-rich Low_complexity Low_complexity 1 50 0 6 709 1177 61 0 0 chrX 16349544 16349691 -150300605 + B1_Mus1 SINE Alu 2 148 0 6 709 220 252 151 28 chrX 16350197 16350303 -150299993 - MIRb SINE MIR -10 258 140 6 709 1061 93 0 0 chrX 16350350 16350490 -150299806 + B1_Mus1 SINE Alu 3 142 -6 6 709 238 50 24 24 chrX 16350493 16350534 -150299762 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 6 709 21 0 0 0 chrX 16350594 16350615 -150299681 + AT_rich Low_complexity Low_complexity 1 21 0 6 709 7453 33 0 0 chrX 16350713 16351594 -150298702 + L1Md_A LINE L1 5702 6582 0 6 709 391 316 0 9 chrX 16351786 16351901 -150298395 + PB1D10 SINE Alu 4 117 0 6 709 250 340 19 39 chrX 16352751 16352855 -150297441 - MIR SINE MIR -127 135 34 6 709 260 294 236 5 chrX 16353439 16353634 -150296662 - MIRc SINE MIR -1 267 28 6 709 400 268 38 85 chrX 16355612 16355824 -150294472 + L1ME2z LINE L1 6205 6406 -38 6 709 250 308 0 37 chrX 16356129 16356210 -150294086 + ID4 SINE ID 6 83 0 6 709 759 120 0 0 chrX 16356215 16356332 -150293964 + (TTCC)n Simple_repeat Simple_repeat 1 117 0 6 709 854 275 80 75 chrX 16356597 16356959 -150293337 - MTEa LTR MaLR -15 364 1 6 709 244 64 43 0 chrX 16358350 16358397 -150291899 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 6 709 488 284 99 7 chrX 16358741 16358883 -150291413 - RSINE1 SINE B4 -8 157 3 6 709 369 323 0 10 chrX 16358940 16359037 -150291259 - RSINE1 SINE B4 -51 114 19 6 709 464 277 44 0 chrX 16359114 16359251 -150291045 + B1F SINE Alu 4 146 -3 6 709 1157 55 7 0 chrX 16361684 16361830 -150288466 - B1_Mm SINE Alu 0 147 1 6 709 260 380 0 21 chrX 16362032 16362126 -150288170 - ID4 SINE ID -59 93 2 6 709 423 0 0 0 chrX 16362188 16362235 -150288061 + (TA)n Simple_repeat Simple_repeat 2 48 0 6 709 500 306 88 44 chrX 16363933 16364138 -150286158 + B3 SINE B2 1 214 -2 6 709 7254 76 0 1 chrX 16364154 16365840 -150284456 + L1Md_F2 LINE L1 307 1991 -3892 6 709 2442 72 3 0 chrX 16365834 16366153 -150284143 + L1Md_F2 LINE L1 5266 5585 -298 6 709 6699 57 99 3 chrX 16366154 16367050 -150283246 + L1Md_F2 LINE L1 5587 6568 -14 6 709 23 0 0 0 chrX 16367320 16367343 -150282953 + AT_rich Low_complexity Low_complexity 1 23 0 6 709 937 87 0 0 chrX 16367980 16368107 -150282189 + B1_Mm SINE Alu 21 147 0 6 709 198 0 0 0 chrX 16368107 16368129 -150282167 + (A)n Simple_repeat Simple_repeat 1 22 0 6 709 827 231 83 52 chrX 16368396 16368684 -150281612 + L1MB8 LINE L1 5592 5888 -290 6 709 322 310 62 0 chrX 16368709 16368822 -150281474 - ID_B1 SINE B4 -1 223 104 6 709 367 256 55 11 chrX 16368736 16368827 -150281469 - B1F SINE Alu -36 113 19 6 709 3998 48 10 6 chrX 16368887 16369388 -150280908 - L1Md_F2 LINE L1 0 6582 6080 6 709 1458 44 0 0 chrX 16369388 16369564 -150280732 + L1Md_A LINE L1 5860 6035 -547 6 709 364 266 34 76 chrX 16369772 16369890 -150280406 + LTR16C LTR ERVL 375 487 -2 6 709 423 0 0 0 chrX 16370011 16370058 -150280238 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 709 743 177 8 8 chrX 16370055 16370308 -150279988 + GA-rich Low_complexity Low_complexity 1 253 0 6 709 24 0 0 0 chrX 16370389 16370413 -150279883 + AT_rich Low_complexity Low_complexity 1 24 0 6 709 302 282 28 0 chrX 16371299 16371370 -150278926 + ID4 SINE ID 10 82 -1 6 709 22 56 0 0 chrX 16371766 16371802 -150278494 + AT_rich Low_complexity Low_complexity 1 36 0 6 709 733 225 77 65 chrX 16371926 16371961 -150278335 + L1MB3 LINE L1 5863 5894 -289 6 709 572 27 0 13 chrX 16371961 16372036 -150278260 + (GA)n Simple_repeat Simple_repeat 1 74 0 6 709 733 225 77 65 chrX 16372036 16372261 -150278035 + L1MB3 LINE L1 5895 6126 -57 6 709 249 33 0 0 chrX 16372327 16372357 -150277939 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 6 709 340 328 103 72 chrX 16372468 16372691 -150277605 - LTR16C LTR ERVL 0 489 260 6 709 276 303 0 0 chrX 16372686 16372753 -150277543 - ID4 SINE ID -14 69 3 6 709 378 0 0 0 chrX 16374131 16374173 -150276123 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 709 183 114 0 0 chrX 16374809 16374844 -150275452 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 6 709 249 109 0 0 chrX 16375158 16375204 -150275092 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 709 297 0 0 0 chrX 16375644 16375677 -150274619 + (TTA)n Simple_repeat Simple_repeat 3 35 0 6 709 3240 41 8 2 chrX 16375706 16376100 -150274196 - MTA_Mm LTR MaLR 0 396 1 6 709 7591 69 57 4 chrX 16376100 16377143 -150273153 - MTA_Mm-int LTR MaLR 0 1098 1 6 709 3215 46 8 2 chrX 16377143 16377537 -150272759 - MTA_Mm LTR MaLR 0 396 1 6 709 188 242 43 57 chrX 16377563 16377633 -150272663 - L3 LINE CR1 -902 3587 3519 6 709 297 0 0 0 chrX 16378234 16378267 -150272029 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 709 375 368 113 21 chrX 16378622 16378861 -150271435 - LTR16A LTR ERVL -101 350 90 6 709 4469 109 21 7 chrX 16378996 16379670 -150270626 + Lx3_Mus LINE L1 6327 7009 0 6 709 198 291 36 0 chrX 16379988 16380043 -150270253 + L2a LINE L2 3369 3425 -1 6 709 571 167 56 28 chrX 16380451 16380630 -150269666 - RMER17C LTR ERVK -136 274 91 6 709 312 320 10 20 chrX 16381208 16381307 -150268989 + ID_B1 SINE B4 109 206 -18 6 709 259 235 68 68 chrX 16381502 16381575 -150268721 + Lx7 LINE L1 7118 7190 -506 6 709 341 236 144 28 chrX 16381586 16381899 -150268397 + Lx7 LINE L1 7273 7695 -1 6 709 471 18 0 0 chrX 16382836 16382892 -150267404 + (CA)n Simple_repeat Simple_repeat 2 57 0 6 709 212 180 49 0 chrX 16382911 16382972 -150267324 + A-rich Low_complexity Low_complexity 4 67 0 6 709 389 272 0 0 chrX 16383003 16383084 -150267212 + ID2 SINE ID 2 82 -1 6 709 744 290 5 27 chrX 16383690 16383910 -150266386 - ID_B1 SINE B4 -8 216 2 6 710 301 257 18 37 chrX 16384642 16384751 -150265545 + PB1D10 SINE Alu 5 111 -6 6 710 351 0 0 0 chrX 16385106 16385145 -150265151 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 710 498 304 40 53 chrX 16385238 16385464 -150264832 - MIR SINE MIR 0 262 40 6 710 530 291 74 12 chrX 16386093 16386337 -150263959 + L1MA4 LINE L1 5855 6113 -187 6 710 2520 114 54 3 chrX 16386339 16386727 -150263569 - Lx LINE L1 0 6654 6247 6 710 3462 83 0 0 chrX 16386727 16387174 -150263122 + Lx LINE L1 5782 6228 -426 6 710 357 296 0 0 chrX 16387197 16387278 -150263018 - ID4 SINE ID 0 83 3 6 710 318 26 0 0 chrX 16387409 16387448 -150262848 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 710 329 282 74 0 chrX 16387593 16387742 -150262554 + L1MA4 LINE L1 6135 6294 -6 6 710 244 225 50 49 chrX 16387714 16387823 -150262473 + L1MA4 LINE L1 6151 6258 -42 6 710 22 70 0 0 chrX 16387828 16387871 -150262425 + AT_rich Low_complexity Low_complexity 1 43 0 6 710 360 119 0 0 chrX 16388750 16388809 -150261487 + (T)n Simple_repeat Simple_repeat 1 59 0 6 710 252 0 0 0 chrX 16389901 16389929 -150260367 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 710 298 217 57 15 chrX 16389931 16390021 -150260275 + B1_Mur4 SINE Alu 46 143 -6 6 710 330 228 127 0 chrX 16390056 16390135 -150260161 - B1F SINE Alu -55 94 6 6 710 1625 219 72 49 chrX 16390207 16390735 -150259561 - Lx9 LINE L1 -1 7643 7104 6 710 313 294 11 0 chrX 16391128 16391220 -150259076 + (TG)n Simple_repeat Simple_repeat 2 94 0 6 710 558 271 33 0 chrX 16391338 16391460 -150258836 - B3 SINE B2 0 216 91 6 710 279 0 0 0 chrX 16391465 16391496 -150258800 + (TA)n Simple_repeat Simple_repeat 2 32 0 6 710 354 320 58 17 chrX 16391724 16391896 -150258400 - Lx8 LINE L1 -295 7178 7000 6 710 421 244 12 0 chrX 16391903 16391985 -150258311 - B4 SINE B4 -207 85 3 6 710 547 291 50 5 chrX 16392071 16392292 -150258004 - L1MA6 LINE L1 -18 6282 6052 7 710 232 337 51 31 chrX 16392337 16392435 -150257861 - PB1D10 SINE Alu -1 116 17 7 710 257 306 14 0 chrX 16392814 16392886 -150257410 + ID4 SINE ID 1 73 -10 7 710 219 69 0 0 chrX 16394578 16394607 -150255689 + (CCCCCG)n Simple_repeat Simple_repeat 2 30 0 7 710 207 299 39 13 chrX 16394792 16394870 -150255426 - MIRb SINE MIR -19 249 170 7 710 531 291 107 7 chrX 16394957 16395106 -150255190 + B3 SINE B2 40 203 -13 7 710 507 217 34 34 chrX 16395133 16395252 -150255044 + B3 SINE B2 93 211 -5 7 710 476 72 14 0 chrX 16395401 16395470 -150254826 + (CA)n Simple_repeat Simple_repeat 1 70 0 7 710 255 243 51 51 chrX 16395583 16395661 -150254635 + ID4 SINE ID 1 78 -5 7 710 430 111 14 0 chrX 16395955 16396027 -150254269 - L1VL1 LINE L1 -6163 259 187 7 710 11359 65 0 9 chrX 16396029 16397513 -150252783 + L1_Mm LINE L1 4113 5586 -297 7 710 7371 70 17 13 chrX 16397513 16398500 -150251796 + L1Md_F2 LINE L1 5587 6577 -5 7 710 11359 65 0 9 chrX 16398500 16398511 -150251785 + L1_Mm LINE L1 5587 5595 -288 7 710 770 193 0 6 chrX 16398518 16398569 -150251727 + polypurine Low_complexity Low_complexity 2 52 0 7 710 1202 100 0 6 chrX 16398569 16398750 -150251546 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 7 710 770 193 0 6 chrX 16398750 16398875 -150251421 + polypurine Low_complexity Low_complexity 53 177 0 7 710 1356 241 69 58 chrX 16399161 16399522 -150250774 + MTEa LTR MaLR 15 379 0 7 710 186 299 145 29 chrX 16399808 16399946 -150250350 - L4 LINE RTE -168 1861 1708 7 710 343 362 142 19 chrX 16400795 16401105 -150249191 - L2b LINE L2 -27 3348 3001 7 710 229 311 13 13 chrX 16401299 16401374 -150248922 - L2a LINE L2 0 3426 3352 7 710 1400 29 0 6 chrX 16402061 16402234 -150248062 + L1_Mus1 LINE L1 6396 6567 0 7 710 180 0 0 0 chrX 16402267 16402287 -150248009 + (A)n Simple_repeat Simple_repeat 1 20 0 7 710 325 289 29 49 chrX 16402307 16402409 -150247887 + ID_B1 SINE B4 48 147 -77 7 710 1167 223 187 44 chrX 16403071 16403456 -150246840 - Lx6 LINE L1 -2 7471 7032 7 710 510 165 0 0 chrX 16403562 16403665 -150246631 + (CA)n Simple_repeat Simple_repeat 2 104 0 7 710 911 149 37 70 chrX 16403665 16403852 -150246444 + MTC LTR MaLR 241 421 0 7 710 441 0 0 0 chrX 16403853 16403902 -150246394 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 710 493 242 116 31 chrX 16403969 16404303 -150245993 - L1M3 LINE L1 -533 5767 5219 7 710 327 281 8 8 chrX 16404336 16404465 -150245831 + L1MA7 LINE L1 6116 6244 -47 7 710 327 250 80 36 chrX 16404466 16404578 -150245718 + PB1D10 SINE Alu 1 117 0 7 710 234 0 0 0 chrX 16404609 16404635 -150245661 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 7 710 2553 200 55 60 chrX 16404635 16405557 -150244739 - Lx6 LINE L1 -1166 6294 5364 7 710 282 301 121 0 chrX 16405887 16406053 -150244243 + MER53 DNA hAT 4 189 -4 7 710 620 313 0 0 chrX 16406205 16406339 -150243957 + RSINE1 SINE B4 3 136 -29 7 710 885 57 29 0 chrX 16406370 16406510 -150243786 + (TAGA)n Simple_repeat Simple_repeat 2 145 0 7 710 1282 269 35 86 chrX 16406621 16407015 -150243281 - MTE2b LTR MaLR -5 374 1 7 710 1199 287 79 45 chrX 16407207 16407700 -150242596 - RMER5 LTR ERV1 0 534 25 7 710 347 271 26 53 chrX 16408513 16408626 -150241670 + MLT1A1 LTR MaLR 265 374 -34 7 710 245 365 19 19 chrX 16408752 16408858 -150241438 - MER20 DNA MER1_type -112 107 2 7 710 865 118 0 0 chrX 16409585 16409704 -150240592 + B2_Mm2 SINE B2 1 119 -76 7 710 38 0 0 0 chrX 16409710 16409748 -150240548 + AT_rich Low_complexity Low_complexity 1 38 0 7 710 492 18 0 0 chrX 16409837 16409894 -150240402 + (GA)n Simple_repeat Simple_repeat 2 58 0 7 710 374 262 0 0 chrX 16409897 16409977 -150240319 - ID4 SINE ID -1 82 3 7 710 360 276 31 0 chrX 16410080 16410178 -150240118 - LTR83 LTR ERVL -96 684 584 7 710 425 331 55 44 chrX 16410523 16410706 -150239590 + ID_B1 SINE B4 38 222 -2 7 710 450 226 32 41 chrX 16410575 16410722 -150239574 + B1F1 SINE Alu 13 147 -2 7 710 396 40 0 0 chrX 16410835 16410885 -150239411 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 710 699 12 0 0 chrX 16410886 16410966 -150239330 + (GA)n Simple_repeat Simple_repeat 2 81 0 7 710 266 220 31 52 chrX 16411224 16411320 -150238976 + L1MA5 LINE L1 6207 6300 0 7 710 6251 80 98 0 chrX 16411856 16412751 -150237545 + L1_Mus3 LINE L1 5654 6636 -2 7 710 266 167 17 0 chrX 16413195 16413255 -150237041 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 710 257 400 79 45 chrX 16413587 16413765 -150236531 - LTR16E2 LTR ERVL -187 381 198 7 710 282 389 31 8 chrX 16414602 16414729 -150235567 - MLT1I LTR MaLR -62 349 220 7 710 455 306 9 0 chrX 16414907 16415015 -150235281 + PB1D7 SINE Alu 4 112 -8 7 710 921 317 30 30 chrX 16415875 16416145 -150234151 - B4A SINE B4 -3 289 20 7 710 1043 298 19 11 chrX 16417092 16417357 -150232939 + B4A SINE B4 4 270 -22 7 710 327 25 0 0 chrX 16417357 16417397 -150232899 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 710 382 287 111 31 chrX 16417414 16417576 -150232720 + MER53 DNA hAT 1 175 -18 7 710 329 322 69 72 chrX 16417633 16417981 -150232315 + MLT1A0 LTR MaLR 19 365 0 7 710 700 304 98 49 chrX 16418234 16418562 -150231734 + MER2 DNA MER2_type 1 344 -1 7 710 219 139 0 0 chrX 16419329 16419365 -150230931 + (A)n Simple_repeat Simple_repeat 1 36 0 7 710 385 237 53 0 chrX 16420177 16420253 -150230043 - B1_Mur1 SINE Alu -13 136 57 7 710 1116 142 44 0 chrX 16420313 16420496 -150229800 - B2_Mm2 SINE B2 -2 193 3 7 710 216 333 14 0 chrX 16420708 16420780 -150229516 - L3 LINE CR1 -1082 3407 3335 7 710 1140 47 7 0 chrX 16421443 16421593 -150228703 + L1Md_A LINE L1 6432 6582 0 7 710 504 276 107 30 chrX 16421764 16421895 -150228401 - ID_B1 SINE B4 0 224 84 7 710 336 235 15 0 chrX 16421923 16421991 -150228305 + ID4_ SINE ID 2 70 -13 7 710 424 357 16 40 chrX 16422318 16422569 -150227727 + Lx8 LINE L1 7220 7464 -9 7 710 22 0 0 0 chrX 16422572 16422594 -150227702 + AT_rich Low_complexity Low_complexity 1 22 0 7 710 596 215 33 46 chrX 16423494 16423645 -150226651 - Lx6 LINE L1 -176 7284 7136 7 710 1241 19 123 0 chrX 16423646 16423801 -150226495 - L1_Mus2 LINE L1 -261 6305 6132 7 710 1967 60 0 0 chrX 16423801 16424050 -150226246 + L1_Mus2 LINE L1 6317 6565 -1 7 710 2245 206 91 49 chrX 16424053 16424579 -150225717 - Lx6 LINE L1 -316 7144 6597 7 710 21 36 0 0 chrX 16425005 16425033 -150225263 + AT_rich Low_complexity Low_complexity 1 28 0 7 710 639 300 57 45 chrX 16425534 16425848 -150224448 + MER33 DNA MER1_type 7 324 0 7 710 421 283 113 0 chrX 16425905 16426011 -150224285 + B1_Mur1 SINE Alu 12 129 -20 7 710 548 143 0 10 chrX 16426025 16426124 -150224172 + GA-rich Low_complexity Low_complexity 1 98 0 7 710 409 335 40 55 chrX 16426139 16426338 -150223958 + B3A SINE B2 1 196 -2 7 710 347 321 94 24 chrX 16426735 16426990 -150223306 - L1MD2 LINE L1 -169 6190 5918 7 710 377 297 9 0 chrX 16427009 16427120 -150223176 - L1MD2 LINE L1 -613 5746 5635 7 710 300 245 98 0 chrX 16427147 16427290 -150223006 - L1MD2 LINE L1 -851 5508 5352 7 710 306 0 0 0 chrX 16427953 16427987 -150222309 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 710 243 0 0 0 chrX 16427987 16428013 -150222283 + (TA)n Simple_repeat Simple_repeat 1 27 0 7 710 492 295 88 29 chrX 16428141 16428294 -150222002 + B3A SINE B2 14 180 -18 7 710 939 84 0 0 chrX 16428294 16428437 -150221859 + (TC)n Simple_repeat Simple_repeat 1 143 0 7 710 216 0 0 0 chrX 16428437 16428460 -150221836 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 710 492 295 88 29 chrX 16428460 16428476 -150221820 + B3A SINE B2 181 193 -5 7 710 404 274 78 28 chrX 16428708 16428888 -150221408 - L1M4 LINE L1 -1333 4813 4625 7 710 258 234 0 0 chrX 16429056 16429120 -150221176 - L1MC LINE L1 -1586 4560 4497 7 710 28 48 0 0 chrX 16429124 16429166 -150221130 + AT_rich Low_complexity Low_complexity 1 42 0 7 710 21 0 0 0 chrX 16429184 16429205 -150221091 + AT_rich Low_complexity Low_complexity 1 21 0 7 710 258 160 0 0 chrX 16429421 16429471 -150220825 + CT-rich Low_complexity Low_complexity 5 54 0 7 710 251 164 18 18 chrX 16429549 16429605 -150220691 + CT-rich Low_complexity Low_complexity 1 56 0 7 710 616 339 104 76 chrX 16429625 16430002 -150220294 + MLT1D-int LTR MaLR 807 1190 -181 7 710 5718 108 5 31 chrX 16430002 16430894 -150219402 + L1_Mus3 LINE L1 5768 6635 -3 7 710 616 339 104 76 chrX 16430894 16430938 -150219358 + MLT1D-int LTR MaLR 1191 1239 -132 7 710 276 260 71 30 chrX 16430939 16431038 -150219258 + MLT1D LTR MaLR 403 505 0 7 710 434 276 64 32 chrX 16431308 16431465 -150218831 + RSINE1 SINE B4 3 164 -1 7 710 639 0 0 0 chrX 16431470 16431541 -150218755 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 7 710 785 229 13 0 chrX 16431543 16431696 -150218600 + B3 SINE B2 1 155 -61 7 710 288 274 94 20 chrX 16431825 16431949 -150218347 - L1MA6 LINE L1 -47 6253 6124 7 710 456 299 0 9 chrX 16431949 16432057 -150218239 - PB1D10 SINE Alu -10 107 1 7 710 288 274 94 20 chrX 16432057 16432081 -150218215 - L1MA6 LINE L1 -177 6123 6096 7 710 29 28 0 0 chrX 16432133 16432169 -150218127 + AT_rich Low_complexity Low_complexity 1 36 0 7 710 936 223 71 0 chrX 16432170 16432367 -150217929 - B3 SINE B2 -5 211 1 7 710 21 0 0 0 chrX 16432731 16432752 -150217544 + AT_rich Low_complexity Low_complexity 1 21 0 7 710 1320 309 49 39 chrX 16433093 16433662 -150216634 - Lx8 LINE L1 0 7473 6899 7 710 207 0 0 0 chrX 16433724 16433747 -150216549 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 710 223 250 77 0 chrX 16434521 16434573 -150215723 - ID SINE ID -154 70 15 7 710 383 339 50 94 chrX 16435393 16435568 -150214728 - MLT1H LTR MaLR 0 549 384 7 710 685 239 84 17 chrX 16435568 16435747 -150214549 - MER58A DNA MER1_type 0 224 34 8 710 648 74 0 0 chrX 16435815 16435910 -150214386 + (TAGA)n Simple_repeat Simple_repeat 4 98 0 8 710 433 305 43 35 chrX 16436302 16436533 -150213763 + L1MC4 LINE L1 7784 8016 -26 8 710 207 0 0 0 chrX 16436541 16436564 -150213732 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 8 710 2906 70 0 5 chrX 16438334 16438719 -150211577 + L1Md_F2 LINE L1 6194 6576 -6 8 710 220 308 87 45 chrX 16438912 16439099 -150211197 + MIRc SINE MIR 44 245 -23 8 710 227 269 45 0 chrX 16439625 16439692 -150210604 + BC1_Mm scRNA scRNA 20 89 -63 8 710 230 81 27 0 chrX 16439809 16439846 -150210450 + (TA)n Simple_repeat Simple_repeat 2 39 0 8 710 1547 170 47 11 chrX 16439852 16440131 -150210165 + Lx4A LINE L1 6769 7057 -1 8 710 215 57 0 86 chrX 16440145 16440203 -150210093 + (TAAA)n Simple_repeat Simple_repeat 4 56 0 8 710 270 269 19 0 chrX 16440222 16440378 -150209918 + (TA)n Simple_repeat Simple_repeat 2 160 0 8 710 456 77 0 0 chrX 16440402 16440467 -150209829 + (TTTA)n Simple_repeat Simple_repeat 2 66 0 8 710 23232 121 16 6 chrX 16440645 16445116 -150205180 + L1_Mus3 LINE L1 2141 6631 -7 8 710 275 235 57 29 chrX 16445400 16445411 -150204885 - ID4_ SINE ID 0 83 12 8 710 278 237 34 0 chrX 16445411 16445470 -150204826 - tRNA-Ala-GCA tRNA tRNA -9 66 6 8 710 35286 26 0 7 chrX 16446004 16451014 -150199282 + L1Md_A LINE L1 622 5586 -297 8 710 8898 12 0 0 chrX 16451014 16452010 -150198286 + L1Md_A LINE L1 5587 6582 0 8 710 1143 22 7 0 chrX 16452022 16452161 -150198135 + L1Md_T LINE L1 5447 5586 -297 8 710 8324 37 1 0 chrX 16452161 16453154 -150197142 + L1Md_T LINE L1 5587 6580 -2 8 710 319 246 102 34 chrX 16453159 16453306 -150196990 + MER33 DNA MER1_type 100 256 -68 8 710 227 246 0 76 chrX 16453334 16453400 -150196896 - ID_B1 SINE B4 -1 223 163 8 710 303 291 169 8 chrX 16453342 16453460 -150196836 - B1F SINE Alu -7 142 6 8 710 432 294 88 74 chrX 16453495 16453859 -150196437 - Lx8 LINE L1 -3 7470 7102 8 710 590 249 99 31 chrX 16453867 16454058 -150196238 + RMER13A LTR ERVK 189 392 -468 8 710 1529 320 67 31 chrX 16454327 16455318 -150194978 - Lx7 LINE L1 -1000 6696 5671 8 710 1775 221 53 37 chrX 16455319 16455767 -150194529 - RLTR16 LTR ERVK 0 505 49 8 710 5065 43 0 5 chrX 16455767 16456375 -150193921 + L1Md_F2 LINE L1 5966 6570 -12 8 710 1775 221 53 37 chrX 16456375 16456418 -150193878 - RLTR16 LTR ERVK -457 48 7 8 710 966 273 10 20 chrX 16456421 16456720 -150193576 - Lx7 LINE L1 -207 5673 5378 8 710 4119 126 22 3 chrX 16456737 16457416 -150192880 - Lx2 LINE L1 -530 6467 5776 8 710 587 248 38 5 chrX 16457403 16457614 -150192682 - Lx7 LINE L1 -482 5398 5181 8 710 318 313 0 0 chrX 16457619 16457702 -150192594 + ID4_ SINE ID 1 83 0 8 710 525 271 48 116 chrX 16458414 16458560 -150191736 + B3A SINE B2 51 187 -8 8 710 452 282 35 7 chrX 16458683 16458826 -150191470 - B1F SINE Alu -2 147 1 8 710 228 347 0 27 chrX 16458971 16459045 -150191251 - LTR16A LTR ERVL -175 276 205 8 710 2391 104 3 6 chrX 16460981 16461329 -150188967 - Lx LINE L1 -14 6640 6294 8 710 528 267 143 0 chrX 16461385 16461546 -150188750 - B3A SINE B2 -10 188 5 8 710 376 208 13 0 chrX 16461654 16461731 -150188565 + PB1D10 SINE Alu 34 111 -6 8 710 202 114 0 28 chrX 16462590 16462626 -150187670 + (GGA)n Simple_repeat Simple_repeat 2 36 0 8 710 313 207 0 0 chrX 16464004 16464062 -150186234 + tRNA-Ala-GCY_ tRNA tRNA 4 61 -14 8 710 520 292 33 0 chrX 16464185 16464305 -150185991 + ID_B1 SINE B4 101 224 0 8 710 803 138 7 0 chrX 16464309 16464447 -150185849 + (GGGA)n Simple_repeat Simple_repeat 2 140 0 8 710 573 259 112 36 chrX 16464891 16465087 -150185209 + B3 SINE B2 6 216 0 8 710 187 303 36 100 chrX 16467114 16467224 -150183072 + L2b LINE L2 3286 3414 -12 8 710 262 407 41 9 chrX 16467894 16468112 -150182184 - MIRb SINE MIR -11 257 33 8 710 205 264 67 33 chrX 16468691 16468781 -150181515 + MIRb SINE MIR 129 221 -47 8 710 232 271 61 30 chrX 16469034 16469133 -150181163 - MamRep434 DNA TcMar -19 407 306 8 710 299 250 18 32 chrX 16469478 16469583 -150180713 - ID4 SINE ID -34 118 20 8 710 311 178 0 22 chrX 16469667 16469759 -150180537 + (TCTG)n Simple_repeat Simple_repeat 3 92 0 8 710 719 251 133 57 chrX 16471000 16471211 -150179085 - B4A SINE B4 -18 274 48 8 710 271 375 61 30 chrX 16473179 16473311 -150176985 + MIR SINE MIR 17 152 -56 8 710 1518 213 120 52 chrX 16473553 16474068 -150176228 - Lx7 LINE L1 -2 7694 7145 8 710 231 301 66 66 chrX 16474092 16474213 -150176083 - B3A SINE B2 -76 122 2 8 710 1104 181 24 5 chrX 16474279 16474485 -150175811 + B3 SINE B2 3 212 -4 8 710 581 288 48 57 chrX 16474701 16474911 -150175385 - B3 SINE B2 -6 210 3 8 710 207 69 0 0 chrX 16474919 16474948 -150175348 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 8 710 180 163 0 140 chrX 16475906 16475956 -150174340 - L2a LINE L2 -3 3423 3381 8 710 231 239 99 0 chrX 16476302 16476373 -150173923 - ID_B1 SINE B4 -1 223 146 8 710 512 163 54 0 chrX 16476317 16476409 -150173887 - B1_Mur4 SINE Alu -26 124 28 8 710 619 188 20 0 chrX 16476394 16476495 -150173801 - B1_Mur4 SINE Alu -38 112 10 8 710 206 325 13 0 chrX 16477173 16477250 -150173046 + GA-rich Low_complexity Low_complexity 3 80 0 8 710 453 19 0 0 chrX 16477353 16477407 -150172889 + (TG)n Simple_repeat Simple_repeat 2 55 0 8 710 226 308 50 61 chrX 16477705 16477916 -150172380 + MIR SINE MIR 41 239 -37 8 710 351 302 0 20 chrX 16478166 16478264 -150172032 - B1F2 SINE Alu -1 148 53 8 710 6683 63 0 0 chrX 16479063 16479949 -150170347 + L1Md_F2 LINE L1 4700 5585 -298 8 710 8127 36 21 1 chrX 16479950 16480926 -150169370 + L1Md_F2 LINE L1 5587 6582 0 8 710 558 226 43 50 chrX 16480948 16481088 -150169208 + B1F SINE Alu 3 141 -8 8 710 725 211 0 0 chrX 16480965 16481093 -150169203 + ID_B1 SINE B4 94 221 -3 8 710 1941 189 127 17 chrX 16481142 16481605 -150168691 + Lx2B LINE L1 6475 6988 -12 8 710 423 0 0 0 chrX 16481612 16481659 -150168637 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 710 726 121 0 0 chrX 16483901 16484017 -150166279 + (TC)n Simple_repeat Simple_repeat 1 116 0 8 710 899 97 13 13 chrX 16484357 16484513 -150165783 + (GGAA)n Simple_repeat Simple_repeat 1 156 0 8 710 197 342 13 13 chrX 16486390 16486467 -150163829 + L2a LINE L2 3348 3424 -2 8 710 369 0 0 0 chrX 16487422 16487463 -150162833 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 710 186 43 0 0 chrX 16488326 16488349 -150161947 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 710 450 94 0 0 chrX 16488670 16488734 -150161562 + (GA)n Simple_repeat Simple_repeat 2 65 0 8 710 268 261 58 0 chrX 16490779 16490848 -150159448 - ID4_ SINE ID -8 75 3 8 710 225 254 32 0 chrX 16491358 16491421 -150158875 + MLT1N2 LTR MaLR 489 553 -9 8 710 414 186 0 0 chrX 16491613 16491699 -150158597 + (TG)n Simple_repeat Simple_repeat 1 86 0 8 710 448 348 60 32 chrX 16491808 16492060 -150158236 - MIRb SINE MIR 0 268 10 8 710 2895 86 2 10 chrX 16492963 16493362 -150156934 - MTA_Mm LTR MaLR 0 396 1 8 710 1966 171 122 5 chrX 16493518 16493895 -150156401 - MTC LTR MaLR 0 421 1 8 710 354 281 126 148 chrX 16493936 16494166 -150156130 - MLT1L LTR MaLR -147 463 146 8 710 306 0 0 0 chrX 16494657 16494691 -150155605 + (TA)n Simple_repeat Simple_repeat 2 35 0 8 710 558 264 75 20 chrX 16494693 16494894 -150155402 - MER2 DNA MER2_type -131 214 3 8 710 760 275 97 89 chrX 16494932 16495075 -150155221 + MLT1C LTR MaLR 1 159 -308 8 710 264 30 0 0 chrX 16495075 16495108 -150155188 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 8 710 558 0 0 0 chrX 16495109 16495171 -150155125 + (GAA)n Simple_repeat Simple_repeat 1 62 0 8 710 760 275 97 89 chrX 16495171 16495488 -150154808 + MLT1C LTR MaLR 160 467 0 8 710 329 365 30 67 chrX 16495545 16495815 -150154481 - L2 LINE L2 -601 2818 2559 8 710 270 0 0 0 chrX 16496215 16496245 -150154051 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 710 698 308 0 0 chrX 16496256 16496412 -150153884 - B3A SINE B2 -38 160 5 8 710 253 330 50 10 chrX 16496486 16496587 -150153709 + MER5B DNA MER1_type 15 119 -59 8 710 678 47 0 0 chrX 16496589 16496675 -150153621 + (TTCC)n Simple_repeat Simple_repeat 3 88 0 8 710 272 308 27 45 chrX 16496793 16496905 -150153391 - PB1D10 SINE Alu -5 112 3 8 710 434 273 80 3 chrX 16496960 16497245 -150153051 + L1MC1 LINE L1 5138 5442 -2553 8 710 24 32 0 0 chrX 16497364 16497395 -150152901 + AT_rich Low_complexity Low_complexity 1 31 0 8 710 926 248 119 0 chrX 16497413 16497724 -150152572 + L1MC1 LINE L1 5479 5826 -507 8 710 272 104 0 40 chrX 16498198 16498248 -150152048 + (TCTCCC)n Simple_repeat Simple_repeat 3 50 0 8 710 951 273 81 50 chrX 16498472 16498954 -150151342 + L1MC1 LINE L1 5819 6315 -18 8 710 25 31 0 0 chrX 16499554 16499586 -150150710 + AT_rich Low_complexity Low_complexity 1 32 0 8 710 223 328 120 49 chrX 16500190 16500373 -150149923 - L2b LINE L2 -237 3138 2943 1 710 208 274 57 57 chrX 16500521 16500645 -150149651 - L2b LINE L2 -761 2658 2535 1 710 302 227 0 85 chrX 16500658 16500679 -150149617 + ID_B1 SINE B4 127 222 -1 2 710 578 71 24 0 chrX 16500679 16500763 -150149533 + B1_Mur4 SINE Alu 65 150 0 3 710 229 42 0 100 chrX 16500765 16500845 -150149451 + (CAAAAA)n Simple_repeat Simple_repeat 1 72 0 4 710 335 329 25 32 chrX 16501599 16501756 -150148540 - L2 LINE L2 -725 2694 2539 5 710 494 279 0 86 chrX 16501837 16502000 -150148296 + ID_B1 SINE B4 80 224 0 6 710 235 338 139 6 chrX 16502011 16502169 -150148127 - L2 LINE L2 -982 2437 2259 5 710 22 0 0 0 chrX 16502776 16502798 -150147498 + AT_rich Low_complexity Low_complexity 1 22 0 7 710 227 333 0 0 chrX 16502886 16502943 -150147353 + tRNA-Ala-GCY_ tRNA tRNA 1 57 -18 8 710 349 323 36 50 chrX 16503050 16503190 -150147106 - ID_B1 SINE B4 0 224 87 9 710 905 351 139 30 chrX 16504022 16504306 -150145990 - MLT1G3 LTR MaLR -39 556 239 1 710 414 0 0 0 chrX 16504306 16504352 -150145944 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 710 249 33 0 0 chrX 16504354 16504384 -150145912 + (GA)n Simple_repeat Simple_repeat 2 31 0 1 710 905 351 139 30 chrX 16504384 16504557 -150145739 - MLT1G3 LTR MaLR -357 238 46 1 710 597 254 56 0 chrX 16504560 16504686 -150145610 + ID_B1 SINE B4 89 221 -3 1 710 208 423 71 46 chrX 16505027 16505265 -150145031 + L4 LINE RTE 1004 1247 -782 1 710 243 323 0 0 chrX 16506015 16506067 -150144229 + B4 SINE B4 28 79 -213 1 710 1324 266 191 0 chrX 16506067 16506450 -150143846 - MT2A LTR ERVL 0 533 78 1 710 2685 178 2 4 chrX 16506462 16506948 -150143348 + Lx LINE L1 6161 6645 -9 1 710 490 282 92 26 chrX 16506960 16507113 -150143183 + B3A SINE B2 27 189 -9 1 710 366 241 0 75 chrX 16507135 16507229 -150143067 + PB1D9 SINE Alu 33 119 -1 1 710 186 43 0 0 chrX 16507278 16507301 -150142995 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 710 1084 76 0 0 chrX 16507301 16507445 -150142851 - B1_Mus2 SINE Alu -3 144 1 2 710 310 173 0 0 chrX 16507454 16507506 -150142790 - MT2A LTR ERVL -481 52 1 1 710 298 292 56 0 chrX 16507515 16507587 -150142709 + RSINE1 SINE B4 82 157 -8 2 710 555 144 0 0 chrX 16507591 16507688 -150142608 + (GA)n Simple_repeat Simple_repeat 1 97 0 2 710 198 0 0 0 chrX 16507994 16508016 -150142280 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 2 710 180 77 0 0 chrX 16508230 16508256 -150142040 + (T)n Simple_repeat Simple_repeat 1 26 0 2 710 2676 186 11 26 chrX 16508268 16508810 -150141486 - Lx LINE L1 -7 6647 6114 2 710 3846 161 0 22 chrX 16508810 16509560 -150140736 - L1Md_A LINE L1 -675 5907 5176 2 710 7939 145 11 16 chrX 16509564 16509968 -150140328 + L1_Mur2 LINE L1 3667 4072 -1805 2 710 441 0 0 0 chrX 16509968 16510017 -150140279 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 710 7939 145 11 16 chrX 16510017 16511101 -150139195 + L1_Mur2 LINE L1 4073 5148 -729 2 710 24 0 0 0 chrX 16511201 16511225 -150139071 + AT_rich Low_complexity Low_complexity 1 24 0 3 710 1235 301 40 8 chrX 16511607 16512006 -150138290 + Lx8 LINE L1 6779 7190 -283 3 710 485 293 0 0 chrX 16512098 16512221 -150138075 + Lx8 LINE L1 6317 6439 -1034 3 710 391 274 120 42 chrX 16512220 16512437 -150137859 + Lx8 LINE L1 7240 7473 0 3 710 556 266 12 17 chrX 16512942 16513114 -150137182 + Lx8 LINE L1 6745 6915 -558 3 710 1904 142 11 90 chrX 16513166 16513217 -150137079 + ORR1A2 LTR MaLR 1 51 -276 3 710 1307 89 10 10 chrX 16513217 16513409 -150136887 + B2_Mm1t SINE B2 2 193 0 3 710 1904 142 11 90 chrX 16513409 16513712 -150136584 + ORR1A2 LTR MaLR 52 327 0 3 710 1334 262 16 3 chrX 16513860 16514174 -150136122 + MLT1B LTR MaLR 16 333 -57 3 710 220 279 16 16 chrX 16514286 16514348 -150135948 - L2b LINE L2 -212 3163 3102 3 710 531 0 0 0 chrX 16514513 16514572 -150135724 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 3 710 435 19 0 0 chrX 16514674 16514726 -150135570 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 710 743 261 59 0 chrX 16514731 16514884 -150135412 - B3A SINE B2 -34 164 3 4 710 224 160 0 74 chrX 16514997 16515051 -150135245 + GA-rich Low_complexity Low_complexity 4 53 0 4 88 4633 199 26 40 chrX 16515051 16515102 -150135194 + Lx2B LINE L1 5875 5924 -1076 4 711 3347 33 5 8 chrX 16515102 16515499 -150134797 + MTA_Mm LTR MaLR 1 396 0 4 711 4633 199 26 40 chrX 16515499 16516584 -150133712 + Lx2B LINE L1 5925 6996 -4 4 711 5767 116 24 8 chrX 16516648 16517519 -150132777 - Lx LINE L1 -4 6650 5766 4 711 215 328 0 0 chrX 16517702 16517763 -150132533 + ID4 SINE ID 22 82 -1 4 711 3673 60 20 8 chrX 16517820 16518310 -150131986 + LTRIS2 LTR ERV1 69 564 0 4 711 237 271 125 77 chrX 16518858 16518962 -150131334 - ORR1A4 LTR MaLR -180 149 41 4 711 965 279 61 0 chrX 16519153 16519382 -150130914 + ORR1D2 LTR MaLR 60 302 -68 4 711 474 313 58 26 chrX 16519390 16519544 -150130752 - B4A SINE B4 -131 161 3 4 711 23 0 0 0 chrX 16520558 16520581 -150129715 + AT_rich Low_complexity Low_complexity 1 23 0 5 711 469 206 118 0 chrX 16520896 16521032 -150129264 + L1MC1 LINE L1 6182 6333 0 5 711 570 283 38 0 chrX 16521046 16521258 -150129038 + L1MB5 LINE L1 5945 6164 -10 5 711 361 315 27 0 chrX 16521378 16521489 -150128807 - PB1D10 SINE Alu -1 116 3 5 711 922 309 133 36 chrX 16521578 16522052 -150128244 + MLT2B1 LTR ERVL 1 520 0 5 711 259 333 126 0 chrX 16523493 16523580 -150126716 - PB1 SINE Alu -26 101 4 5 711 405 0 0 0 chrX 16524088 16524133 -150126163 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 711 13556 81 11 2 chrX 16524164 16526824 -150123472 - L1Md_F2 LINE L1 -6 6576 3888 5 711 4158 140 52 29 chrX 16526824 16528497 -150121799 - L1Md_F2 LINE L1 -4109 1774 217 5 711 382 161 0 0 chrX 16528721 16528783 -150121513 - B3A SINE B2 -123 75 14 5 711 304 296 36 36 chrX 16528850 16528987 -150121309 - MER45B DNA Tip100 -247 793 657 5 711 25 0 0 0 chrX 16528996 16529021 -150121275 + AT_rich Low_complexity Low_complexity 1 25 0 6 711 301 257 0 86 chrX 16529021 16529102 -150121194 - MLT1D LTR MaLR -553 74 1 6 711 398 428 27 0 chrX 16529201 16529388 -150120908 - MLT1H2 LTR MaLR -279 210 19 6 711 473 306 38 124 chrX 16530012 16530382 -150119914 - MLT1E2 LTR MaLR -8 497 160 6 711 249 277 48 154 chrX 16530657 16530845 -150119451 + RMER15 LTR ERVL 337 504 -71 6 711 212 77 26 0 chrX 16530845 16530884 -150119412 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 6 711 526 243 6 124 chrX 16530959 16531128 -150119168 - MLT1E2 LTR MaLR -478 149 1 6 711 552 302 20 12 chrX 16532780 16533048 -150117248 + Lx8 LINE L1 5601 5903 -1570 6 711 504 125 63 42 chrX 16533203 16533345 -150116951 - Lx9 LINE L1 0 7644 7500 6 711 231 331 184 35 chrX 16533447 16533757 -150116539 - MER99 DNA hAT? -474 357 2 6 711 30330 85 8 5 chrX 16533943 16538993 -150111303 + L1Md_F2 LINE L1 522 5586 -297 6 711 7556 65 8 2 chrX 16538993 16539980 -150110316 + L1Md_F2 LINE L1 5587 6579 -3 6 711 288 297 173 7 chrX 16540165 16540304 -150109992 + MIRb SINE MIR 99 260 -2 7 711 279 0 0 0 chrX 16540386 16540417 -150109879 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 711 270 0 0 0 chrX 16540459 16540489 -150109807 + (TC)n Simple_repeat Simple_repeat 2 31 0 7 711 342 0 0 0 chrX 16540489 16540526 -150109770 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 711 376 308 122 43 chrX 16540537 16540676 -150109620 - B3 SINE B2 -66 150 1 7 711 550 304 67 7 chrX 16540735 16540884 -150109412 - RSINE1 SINE B4 0 165 8 7 711 1164 62 0 7 chrX 16541111 16541257 -150109039 + B1_Mus1 SINE Alu 4 148 0 7 711 1048 96 0 0 chrX 16541770 16541906 -150108390 - B1_Mus1 SINE Alu -12 136 1 7 711 22 56 0 0 chrX 16542395 16542431 -150107865 + AT_rich Low_complexity Low_complexity 1 36 0 7 711 2685 40 9 0 chrX 16543423 16543751 -150106545 + L1Md_F3 LINE L1 6254 6584 0 7 711 252 0 0 0 chrX 16543951 16543979 -150106317 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 8 711 1973 266 84 31 chrX 16544140 16544791 -150105505 - MER45B DNA Tip100 0 1040 355 8 711 209 194 0 0 chrX 16544937 16544973 -150105323 + (TATATG)n Simple_repeat Simple_repeat 4 39 0 8 711 210 150 0 0 chrX 16544973 16545013 -150105283 + (TAGA)n Simple_repeat Simple_repeat 3 42 0 8 711 308 380 7 66 chrX 16545135 16545287 -150105009 - MER45B DNA Tip100 -894 146 4 8 711 1513 262 75 2 chrX 16545753 16546262 -150104034 - L1MB2 LINE L1 -2 6169 5624 8 711 1387 244 46 27 chrX 16546333 16546704 -150103592 + MTE2b LTR MaLR 1 378 -1 8 711 1013 264 144 9 chrX 16546705 16547053 -150103243 + MTE2b-int LTR MaLR 1 395 -1185 8 711 1690 292 133 18 chrX 16547065 16547630 -150102666 + MTE2b-int LTR MaLR 542 1171 -409 8 711 1008 273 117 18 chrX 16547724 16548067 -150102229 + MTE2a LTR MaLR 1 377 -2 8 711 239 365 59 52 chrX 16548514 16548667 -150101629 - MIR3 SINE MIR 0 208 55 8 711 908 279 90 26 chrX 16549531 16549969 -150100327 - LTR48 LTR ERV1 -58 729 104 8 711 284 243 57 0 chrX 16550633 16550703 -150099593 + PB1D10 SINE Alu 43 116 -1 8 711 343 284 137 0 chrX 16550956 16551051 -150099245 - B1F SINE Alu -41 108 1 9 711 182 105 0 26 chrX 16551441 16551480 -150098816 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 9 711 5938 137 21 6 chrX 16551486 16552441 -150097855 - Lx2 LINE L1 -2 6995 6027 9 711 224 336 16 32 chrX 16552462 16552588 -150097708 - MIR SINE MIR -49 213 90 9 711 293 322 128 50 chrX 16554130 16554349 -150095947 + ORR1E LTR MaLR 8 243 -116 9 711 573 339 25 38 chrX 16555264 16555503 -150094793 + MER47B DNA MER2_type 9 244 -174 9 711 1046 135 6 0 chrX 16555540 16555718 -150094578 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 9 711 855 188 0 0 chrX 16555725 16555869 -150094427 - B1_Mur1 SINE Alu -5 144 1 9 711 294 253 89 0 chrX 16555869 16555948 -150094348 + MER47B DNA MER2_type 333 418 0 9 711 198 103 0 0 chrX 16557225 16557254 -150093042 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 711 447 306 32 16 chrX 16557255 16557378 -150092918 - B1F1 SINE Alu -13 136 12 9 711 4847 62 9 2 chrX 16557513 16558142 -150092154 + L1_Mus2 LINE L1 5933 6566 0 1 711 3367 70 41 7 chrX 16558193 16558655 -150091641 + L1Md_F2 LINE L1 6102 6579 -3 1 711 954 258 114 72 chrX 16558755 16559089 -150091207 + MLT1B LTR MaLR 3 350 -40 1 711 703 302 106 47 chrX 16559868 16560188 -150090108 + MER2 DNA MER2_type 1 339 -6 1 711 864 253 11 17 chrX 16561114 16561295 -150089001 + MER5A DNA MER1_type 4 183 -6 1 711 408 317 126 33 chrX 16561612 16561883 -150088413 + MER121 Unknown Unknown 115 410 -2 1 711 210 267 0 0 chrX 16562261 16562306 -150087990 + A-rich Low_complexity Low_complexity 2 46 0 1 711 3190 61 2 2 chrX 16562411 16562807 -150087489 - MTA_Mm LTR MaLR 0 396 1 1 711 316 316 14 61 chrX 16563079 16563227 -150087069 - LTR48 LTR ERV1 -167 620 480 1 711 239 353 88 7 chrX 16563299 16563436 -150086860 - LTR48 LTR ERV1 -493 151 4 1 711 183 134 48 24 chrX 16563521 16563605 -150086691 + (TA)n Simple_repeat Simple_repeat 2 87 0 1 711 676 286 11 33 chrX 16565176 16565357 -150084939 + B3A SINE B2 1 177 -21 1 711 634 258 8 0 chrX 16565357 16565481 -150084815 - B1_Mur1 SINE Alu -24 125 1 1 711 331 311 28 70 chrX 16565359 16565501 -150084795 - MT2B LTR ERVL -322 279 144 1 711 465 206 20 20 chrX 16565816 16565915 -150084381 + MTD LTR MaLR 22 120 -299 1 711 186 158 0 0 chrX 16565915 16565941 -150084355 + T-rich Low_complexity Low_complexity 13 38 0 1 711 4974 156 14 10 chrX 16565941 16566811 -150083485 - Lx LINE L1 0 6654 5782 1 711 186 158 0 0 chrX 16566811 16566822 -150083474 + T-rich Low_complexity Low_complexity 2 12 0 1 711 4646 74 0 0 chrX 16566856 16567452 -150082844 - L1_Mus1 LINE L1 -2 6565 5970 1 711 5307 83 8 0 chrX 16567452 16568335 -150081961 + L1_Mus1 LINE L1 5082 5969 -598 1 711 4206 139 3 11 chrX 16568334 16569054 -150081242 - L1_Mm LINE L1 -87 5796 5083 1 711 2567 45 0 0 chrX 16569060 16569372 -150080924 + L1_Mus1 LINE L1 6271 6582 0 1 711 917 247 93 86 chrX 16569376 16569677 -150080619 + MTD LTR MaLR 115 417 -2 1 711 509 248 99 15 chrX 16569703 16569834 -150080462 - B1F SINE Alu -1 148 7 1 711 506 307 173 56 chrX 16570301 16570436 -150079860 + MLT1A0 LTR MaLR 1 155 -210 1 711 3007 52 0 0 chrX 16570436 16570804 -150079492 + L1Md_F2 LINE L1 6201 6568 -14 1 711 506 307 173 56 chrX 16570804 16570837 -150079459 + MLT1A0 LTR MaLR 156 178 -187 1 711 216 0 0 0 chrX 16570837 16570861 -150079435 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 1 711 506 307 173 56 chrX 16570861 16571015 -150079281 + MLT1A0 LTR MaLR 179 362 -3 1 711 327 49 0 0 chrX 16574053 16574094 -150076202 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 711 347 237 66 0 chrX 16574107 16574183 -150076113 - B3 SINE B2 -46 170 90 1 711 249 358 30 96 chrX 16574711 16574878 -150075418 + MIR3 SINE MIR 34 189 -19 1 711 1018 318 77 99 chrX 16576485 16577030 -150073266 - MLT1F2 LTR MaLR -27 533 1 1 711 258 312 56 8 chrX 16577080 16577206 -150073090 - MARNA DNA Mariner -45 541 410 1 711 496 240 96 64 chrX 16577214 16577401 -150072895 + Lx8 LINE L1 7279 7471 -2 1 711 348 297 144 28 chrX 16577489 16577669 -150072627 - MARNA DNA Mariner -222 364 164 1 711 189 0 0 0 chrX 16578142 16578163 -150072133 + (CACCC)n Simple_repeat Simple_repeat 1 21 0 1 711 317 304 0 0 chrX 16578302 16578371 -150071925 - PB1D7 SINE Alu -8 112 44 1 711 624 318 81 20 chrX 16578945 16579192 -150071104 + MLT1H2 LTR MaLR 2 263 -226 1 711 340 277 59 10 chrX 16579178 16579280 -150071016 + MTE2a LTR MaLR 184 290 -89 1 711 2242 74 21 167 chrX 16579354 16579827 -150070469 - L1_Mus3 LINE L1 -8 6630 6227 1 711 4699 102 6 0 chrX 16579821 16580948 -150069348 + L1_Mus3 LINE L1 5078 6214 -424 1 711 1915 217 60 5 chrX 16581008 16581392 -150068904 - MTD LTR MaLR -3 416 12 1 711 546 195 22 56 chrX 16581409 16581586 -150068710 - RCHARR1 DNA MER1_type -77 897 727 1 711 357 176 216 0 chrX 16581586 16581660 -150068636 + B4A SINE B4 1 90 -202 1 711 1008 301 46 0 chrX 16581668 16581927 -150068369 - RCHARR1 DNA MER1_type -699 275 5 1 711 648 306 0 48 chrX 16581940 16582105 -150068191 + RSINE1 SINE B4 9 165 0 1 711 230 231 39 0 chrX 16582199 16582251 -150068045 + MLT1H2 LTR MaLR 295 348 -141 1 711 264 130 0 0 chrX 16582416 16582462 -150067834 + (TGGA)n Simple_repeat Simple_repeat 2 47 0 1 711 264 252 18 55 chrX 16582847 16582956 -150067340 - CYRA11_Mm Unknown Y-chromosome -295 322 218 1 711 551 194 40 8 chrX 16582860 16582985 -150067311 + URR1B DNA MER1_type 86 214 -11 1 711 434 328 33 43 chrX 16582991 16583201 -150067095 + LTR33 LTR ERVL 10 217 -298 1 711 576 154 0 0 chrX 16583236 16583359 -150066937 + CT-rich Low_complexity Low_complexity 2 124 0 1 711 221 103 14 42 chrX 16583612 16583683 -150066613 + A-rich Low_complexity Low_complexity 1 69 0 1 711 186 402 21 0 chrX 16584816 16584913 -150065383 - MIRb SINE MIR -57 211 113 1 711 252 321 25 0 chrX 16585179 16585260 -150065036 - ID4_ SINE ID 0 83 1 1 711 189 107 0 0 chrX 16585785 16585813 -150064483 + (A)n Simple_repeat Simple_repeat 1 28 0 1 711 252 312 0 13 chrX 16585963 16586041 -150064255 - ID4 SINE ID -5 78 2 1 711 510 17 0 0 chrX 16587046 16587105 -150063191 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 711 822 236 53 11 chrX 16588397 16588585 -150061711 + B3A SINE B2 1 196 -2 1 711 232 352 38 96 chrX 16588827 16589066 -150061230 + ORR1E LTR MaLR 97 321 -38 1 711 576 0 0 0 chrX 16589187 16589251 -150061045 + (TTC)n Simple_repeat Simple_repeat 2 65 0 1 711 4423 129 5 1 chrX 16589267 16589936 -150060360 - Lx2 LINE L1 0 6997 6327 1 711 418 267 0 0 chrX 16590133 16590223 -150060073 - B4A SINE B4 -202 90 1 1 711 214 359 103 0 chrX 16590772 16590850 -150059446 + MER91A DNA Tip100 1 86 -110 1 711 810 256 8 71 chrX 16592307 16592415 -150057881 - L1MB3 LINE L1 -287 5896 5802 1 711 5286 107 10 7 chrX 16592415 16593189 -150057107 + L1_Mus4 LINE L1 5854 6630 -6 1 711 810 256 8 71 chrX 16593189 16593433 -150056863 - L1MB3 LINE L1 -382 5801 5566 1 711 253 257 31 16 chrX 16594827 16594913 -150055383 + ID2 SINE ID 2 88 -64 1 711 25 0 0 0 chrX 16595630 16595655 -150054641 + AT_rich Low_complexity Low_complexity 1 25 0 1 711 434 244 163 32 chrX 16595705 16595828 -150054468 + ID_B1 SINE B4 83 221 -3 1 711 218 250 200 0 chrX 16595915 16595975 -150054321 + ID4 SINE ID 3 74 -9 1 711 1952 127 36 0 chrX 16596042 16596350 -150053946 + Lx3C LINE L1 6649 6967 -9 1 711 381 272 10 10 chrX 16596746 16596850 -150053446 - PB1D10 SINE Alu -9 108 5 1 711 338 206 0 19 chrX 16596894 16596998 -150053298 - Lx5 LINE L1 0 7050 6949 1 711 306 286 0 0 chrX 16597056 16597119 -150053177 + Tigger1 DNA MER2_type 2355 2417 -1 1 711 387 0 0 0 chrX 16597469 16597512 -150052784 + (TC)n Simple_repeat Simple_repeat 1 43 0 1 711 415 343 49 16 chrX 16598628 16598812 -150051484 + ORR1E LTR MaLR 1 190 -169 1 711 276 220 43 67 chrX 16598872 16598956 -150051340 - MTEa LTR MaLR -52 327 244 1 711 283 322 161 0 chrX 16599620 16599707 -150050589 - B4 SINE B4 -8 284 184 1 711 3019 24 45 8 chrX 16599970 16600344 -150049952 - L1Md_F3 LINE L1 -15 6569 6182 1 711 2380 33 7 0 chrX 16600344 16600646 -150049650 + L1Md_F3 LINE L1 5629 5932 -652 1 711 305 255 163 0 chrX 16601154 16601252 -150049044 - MER5A1 DNA MER1_type -52 114 1 1 711 359 239 58 7 chrX 16601407 16601546 -150048750 + Lx9 LINE L1 7477 7622 -22 1 711 34 0 0 0 chrX 16601554 16601588 -150048708 + AT_rich Low_complexity Low_complexity 1 34 0 1 711 294 95 0 0 chrX 16601867 16601909 -150048387 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 711 252 402 0 0 chrX 16601973 16602055 -150048241 - ID4_ SINE ID 0 83 2 1 711 396 0 0 0 chrX 16602117 16602161 -150048135 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 711 273 29 0 0 chrX 16602201 16602235 -150048061 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 711 304 333 15 8 chrX 16603973 16604103 -150046193 - L1MC1 LINE L1 -52 6281 6151 1 711 888 10 0 0 chrX 16604186 16604287 -150046009 + (TTC)n Simple_repeat Simple_repeat 2 102 0 1 711 254 200 0 0 chrX 16604287 16604332 -150045964 - RMER12B LTR ERVK -210 1194 1150 1 711 1353 93 16 0 chrX 16604512 16604695 -150045601 + B2_Mm2 SINE B2 1 186 -9 1 711 649 280 122 0 chrX 16604810 16604962 -150045334 + B3 SINE B2 1 164 -52 1 711 591 92 0 0 chrX 16604962 16605049 -150045247 + (TA)n Simple_repeat Simple_repeat 2 88 0 1 711 649 280 122 0 chrX 16605049 16605085 -150045211 + B3 SINE B2 165 211 -5 1 711 243 250 23 35 chrX 16606074 16606161 -150044135 + MTEb LTR MaLR 282 367 -12 1 711 1108 265 109 22 chrX 16606278 16606598 -150043698 + MTE2b LTR MaLR 8 355 -24 1 711 360 274 74 45 chrX 16606825 16607035 -150043261 + L1MB5 LINE L1 5951 6163 -21 1 711 1513 204 105 15 chrX 16607196 16607539 -150042757 - ORR1D1 LTR MaLR 0 374 1 1 711 331 311 18 36 chrX 16607539 16607638 -150042658 - RSINE1 SINE B4 -66 99 2 1 711 333 0 0 0 chrX 16607803 16607840 -150042456 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 711 420 81 40 0 chrX 16608081 16608155 -150042141 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 711 629 278 103 62 chrX 16608283 16608730 -150041566 + MLT2B1 LTR ERVL 6 535 -20 1 711 341 319 87 90 chrX 16608767 16608912 -150041384 + Charlie7 DNA MER1_type 2094 2239 -373 1 711 845 235 51 5 chrX 16608912 16609109 -150041187 - B3 SINE B2 -9 207 2 1 711 341 319 87 90 chrX 16609109 16609308 -150040988 + Charlie7 DNA MER1_type 2240 2437 -175 1 711 1499 247 45 48 chrX 16609314 16609443 -150040853 + L1MC1 LINE L1 3831 3956 -2190 1 711 715 297 10 0 chrX 16609443 16609652 -150040644 + B3 SINE B2 1 211 -5 1 711 1499 247 45 48 chrX 16609652 16610148 -150040148 + L1MC1 LINE L1 3957 4454 -1692 1 711 675 261 30 17 chrX 16610180 16610414 -150039882 + L1MC1 LINE L1 5029 5265 -881 1 711 398 289 41 111 chrX 16610421 16610592 -150039704 - RMER15 LTR ERVL -12 563 405 1 711 1088 284 42 88 chrX 16610626 16611194 -150039102 - Lx8 LINE L1 -247 7226 6685 1 711 265 329 0 0 chrX 16611209 16611291 -150039005 - RMER15-int LTR ERVL -2947 2052 1971 1 711 192 217 0 0 chrX 16611308 16611354 -150038942 + (CATA)n Simple_repeat Simple_repeat 4 49 0 1 711 1017 287 11 30 chrX 16611841 16612214 -150038082 - RMER15-int LTR ERVL -3364 1635 1270 1 711 402 260 0 37 chrX 16612263 16612371 -150037925 - RMER15-int LTR ERVL -4235 764 661 1 711 694 278 34 11 chrX 16612403 16612581 -150037715 + B3A SINE B2 2 183 -15 1 711 1098 226 0 24 chrX 16612654 16612863 -150037433 + B3 SINE B2 8 211 -5 2 711 825 331 31 3 chrX 16612871 16613159 -150037137 - RMER15-int LTR ERVL -4354 645 350 1 711 318 314 8 16 chrX 16613225 16613348 -150036948 - Lx8 LINE L1 -303 7170 7049 2 711 665 251 30 5 chrX 16613366 16613656 -150036640 + L1MC1 LINE L1 5264 5575 -2420 1 711 343 318 30 83 chrX 16613657 16613711 -150036585 + L1MC1 LINE L1 6044 6088 -245 1 711 919 165 191 0 chrX 16613711 16613899 -150036397 - URR1A DNA MER1_type -1 225 2 2 711 343 318 30 83 chrX 16613899 16614074 -150036222 + L1MC1 LINE L1 6089 6261 -72 1 711 205 205 0 0 chrX 16614104 16614143 -150036153 + A-rich Low_complexity Low_complexity 1 39 0 2 711 254 248 173 0 chrX 16614560 16614693 -150035603 + Charlie7 DNA MER1_type 2402 2557 -55 1 711 227 282 84 0 chrX 16614728 16614799 -150035497 - LTR16E2 LTR ERVL -24 514 438 2 711 595 155 0 0 chrX 16614799 16614896 -150035400 + L1Md_F2 LINE L1 219 315 -6323 2 711 5489 79 23 4 chrX 16614892 16616356 -150033940 + L1Md_F2 LINE L1 639 2135 -3748 2 711 2127 55 7 7 chrX 16616349 16616640 -150033656 + L1Md_F2 LINE L1 5296 5586 -297 2 711 7223 91 2 4 chrX 16616640 16617625 -150032671 + L1Md_F2 LINE L1 5587 6569 -13 2 711 8314 86 19 20 chrX 16617627 16618896 -150031400 + L1Md_F2 LINE L1 4318 5585 -298 2 711 8042 55 0 1 chrX 16618897 16619892 -150030404 + L1Md_F2 LINE L1 5587 6580 -2 2 711 5554 87 32 1 chrX 16619994 16620766 -150029530 + L1Md_F2 LINE L1 5783 6578 -4 2 711 415 361 62 54 chrX 16620774 16621032 -150029264 - LTR16E2 LTR ERVL -87 481 222 2 711 431 326 0 0 chrX 16621461 16621559 -150028737 + ID_B1 SINE B4 80 177 -47 2 711 23 33 0 0 chrX 16621690 16621720 -150028576 + AT_rich Low_complexity Low_complexity 1 30 0 2 711 25 0 0 0 chrX 16621925 16621950 -150028346 + AT_rich Low_complexity Low_complexity 1 25 0 2 711 422 351 91 9 chrX 16622611 16622841 -150027455 + ORR1E LTR MaLR 6 254 -105 2 711 815 292 18 45 chrX 16622973 16623303 -150026993 - RMER15-int LTR ERVL -3235 1764 1444 2 711 1010 82 7 0 chrX 16623714 16623860 -150026436 + L1_Mus2 LINE L1 6419 6565 -1 2 711 201 121 0 0 chrX 16624941 16624974 -150025322 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 711 5454 90 35 4 chrX 16625320 16626092 -150024204 - L1Md_F2 LINE L1 -2 6580 5785 2 711 1130 56 19 6 chrX 16626094 16626255 -150024041 - L1Md_F3 LINE L1 0 6584 6422 2 711 34981 50 3 1 chrX 16626258 16630986 -150019310 + L1Md_F3 LINE L1 1203 5937 -647 2 711 4017 105 124 6 chrX 16630984 16631700 -150018596 - L1Md_A LINE L1 -5521 1203 441 2 711 4462 50 7 7 chrX 16631702 16632302 -150017994 - L1_Mm LINE L1 -84 5799 5200 2 711 1876 50 4 0 chrX 16632363 16632602 -150017694 + L1Md_F2 LINE L1 6112 6351 -231 2 711 14613 83 4 0 chrX 16632602 16634701 -150015595 + L1Md_F2 LINE L1 3480 5586 -297 2 711 6818 99 15 7 chrX 16634702 16635689 -150014607 + L1Md_F2 LINE L1 5588 6582 0 2 711 8309 239 84 59 chrX 16635689 16639403 -150010893 + Lx9 LINE L1 2199 6040 -1604 2 711 594 162 0 0 chrX 16639552 16639669 -150010627 + (TG)n Simple_repeat Simple_repeat 2 118 0 2 711 1625 292 30 4 chrX 16639684 16640159 -150010137 + Lx9 LINE L1 6358 6844 -800 2 711 637 258 33 87 chrX 16640192 16640434 -150009862 + Lx9 LINE L1 6947 7175 -469 2 711 225 94 0 0 chrX 16640458 16640490 -150009806 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 2 711 348 261 115 0 chrX 16640530 16640660 -150009636 + Lx9 LINE L1 7325 7469 -175 2 711 625 199 143 15 chrX 16640741 16640874 -150009422 + B1_Mur4 SINE Alu 1 150 0 2 711 222 105 0 0 chrX 16641628 16641666 -150008630 + (TTAG)n Simple_repeat Simple_repeat 3 40 0 2 711 1233 313 109 15 chrX 16641669 16642136 -150008160 - MLT2B1 LTR ERVL -5 515 5 2 711 471 294 68 31 chrX 16642598 16642924 -150007372 + L1ME2 LINE L1 5824 6161 -3 2 711 9676 78 7 34 chrX 16642906 16644862 -150005434 + Lx3_Mus LINE L1 5111 7009 0 2 711 321 309 64 0 chrX 16645003 16645097 -150005199 + B1F1 SINE Alu 1 100 -49 2 711 228 335 153 53 chrX 16645165 16645335 -150004961 + MTEa LTR MaLR 106 292 -78 2 711 395 223 124 31 chrX 16645320 16645456 -150004840 + MTEa LTR MaLR 210 376 -3 2 88 260 326 200 28 chrX 16646087 16646232 -150004064 - MER5A DNA MER1_type -6 183 14 2 712 242 295 22 11 chrX 16646828 16646917 -150003379 + GA-rich Low_complexity Low_complexity 1 90 0 2 712 240 388 0 30 chrX 16647098 16647199 -150003097 + MIRb SINE MIR 21 118 -150 2 712 1218 89 56 0 chrX 16647219 16647399 -150002897 + B2_Mm2 SINE B2 2 191 -4 2 712 3746 79 16 2 chrX 16648402 16648909 -150001387 - L1_Mus3 LINE L1 -5 6633 6120 2 712 308 315 28 0 chrX 16649220 16649328 -150000968 - HAL1 LINE L1 -1611 896 786 2 712 1088 269 0 31 chrX 16649505 16649628 -150000668 + MTD LTR MaLR 1 120 -299 2 712 1081 30 0 0 chrX 16649628 16649763 -150000533 - L1_Mus1 LINE L1 0 6567 6433 2 712 1088 269 0 31 chrX 16649763 16649900 -150000396 + MTD LTR MaLR 121 253 -166 2 712 302 301 16 45 chrX 16649965 16650055 -150000241 + MLT1G3 LTR MaLR 156 299 -296 2 712 1536 22 0 0 chrX 16650064 16650244 -150000052 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 2 712 739 80 18 0 chrX 16650245 16650357 -149999939 + (CCCCCT)n Simple_repeat Simple_repeat 1 114 0 2 712 246 292 32 43 chrX 16650544 16650637 -149999659 + L2a LINE L2 3316 3407 -19 2 712 209 320 136 0 chrX 16650801 16650904 -149999392 + MIR SINE MIR 57 173 -89 2 712 251 300 0 99 chrX 16651314 16651425 -149998871 - MER5A1 DNA MER1_type -21 145 46 2 712 36 0 0 0 chrX 16651788 16651824 -149998472 + AT_rich Low_complexity Low_complexity 1 36 0 2 712 414 0 0 0 chrX 16651998 16652044 -149998252 + (TC)n Simple_repeat Simple_repeat 1 46 0 2 712 240 35 0 0 chrX 16652053 16652082 -149998214 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 712 243 0 0 0 chrX 16652351 16652378 -149997918 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 712 1682 210 145 3 chrX 16652380 16652738 -149997558 + MTD LTR MaLR 3 411 -8 2 712 777 216 146 10 chrX 16653111 16653317 -149996979 + MTD LTR MaLR 170 403 -16 2 712 918 290 136 33 chrX 16653365 16653715 -149996581 - MTD LTR MaLR -2 377 30 2 712 399 21 0 0 chrX 16654074 16654122 -149996174 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 712 267 210 49 0 chrX 16654752 16654833 -149995463 + L1M5 LINE L1 5716 5800 -373 2 712 2787 128 171 6 chrX 16654904 16655406 -149994890 + RMER4B LTR ERVK 1 585 0 2 712 674 243 44 10 chrX 16655553 16655759 -149994537 - B3A SINE B2 -4 212 2 2 712 188 283 57 0 chrX 16656928 16656981 -149993315 - L2c LINE L2 -36 3351 3296 2 712 255 262 16 0 chrX 16657101 16657162 -149993134 + ID4_ SINE ID 21 82 -1 2 712 226 320 120 46 chrX 16657222 16657330 -149992966 + PB1D10 SINE Alu 2 117 0 2 712 782 220 51 59 chrX 16657336 16657603 -149992693 - MLT1A LTR MaLR -86 279 1 2 712 1067 289 31 49 chrX 16657620 16658009 -149992287 - MLT1B LTR MaLR -6 384 3 2 712 387 0 0 0 chrX 16658509 16658552 -149991744 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 712 378 284 0 44 chrX 16658580 16658694 -149991602 + MER34A LTR ERV1 25 133 -438 2 712 615 241 113 0 chrX 16658830 16658971 -149991325 + B3A SINE B2 1 157 -41 2 712 298 225 0 63 chrX 16659261 16659356 -149990940 + MER34A LTR ERV1 478 566 -5 2 712 518 252 0 42 chrX 16659799 16659919 -149990377 - PB1D10 SINE Alu 0 117 3 2 712 387 271 0 53 chrX 16659823 16659936 -149990360 - ID_B1 SINE B4 -48 176 70 2 712 426 165 153 0 chrX 16660373 16660458 -149989838 - MTC LTR MaLR 0 421 324 2 712 486 194 116 39 chrX 16660442 16660571 -149989725 - MTC LTR MaLR -282 139 1 2 712 303 288 118 88 chrX 16662916 16663179 -149987117 - L2a LINE L2 -70 3356 3086 2 712 490 281 149 80 chrX 16663181 16663571 -149986725 + MLT1C LTR MaLR 5 421 -46 2 712 596 227 11 182 chrX 16663589 16663858 -149986438 - Lx6 LINE L1 -26 7434 7212 2 712 207 333 65 57 chrX 16663904 16664028 -149986268 - L2a LINE L2 -336 3090 2966 2 712 841 179 37 0 chrX 16664192 16664326 -149985970 + B1_Mur3 SINE Alu 2 140 -9 2 712 183 42 0 0 chrX 16664326 16664350 -149985946 + (CAA)n Simple_repeat Simple_repeat 2 25 0 2 712 383 357 77 31 chrX 16664374 16664634 -149985662 - L2a LINE L2 -812 2607 2336 2 712 369 0 0 0 chrX 16664841 16664882 -149985414 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 712 479 293 81 39 chrX 16664979 16665315 -149984981 - L1ME1 LINE L1 -463 5881 5532 2 712 783 272 39 65 chrX 16665344 16665777 -149984519 - L1MD LINE L1 -756 5390 4969 2 712 250 288 0 0 chrX 16665815 16665874 -149984422 - MLT1A0 LTR MaLR -21 344 286 2 712 939 219 85 0 chrX 16666051 16666252 -149984044 + RLTR42 LTR ERVK 1 218 -21 2 712 3991 163 13 46 chrX 16666259 16667036 -149983260 + RLTR42-int LTR ERVK 1 751 -4771 2 712 1591 129 24 13 chrX 16667037 16667051 -149983245 - Lx2 LINE L1 -676 6321 6303 2 712 2816 91 39 2 chrX 16667051 16667459 -149982837 - Lx LINE L1 -5 6649 6227 2 712 1591 129 24 13 chrX 16667459 16667742 -149982554 - Lx2 LINE L1 -695 6302 6022 2 712 3455 127 35 26 chrX 16667742 16668348 -149981948 + RLTR42-int LTR ERVK 773 1383 -4139 2 712 2069 111 31 10 chrX 16668359 16668732 -149981564 + L1_Mur2 LINE L1 5005 5386 -461 2 712 12437 145 62 42 chrX 16668758 16671328 -149978968 + RLTR42-int LTR ERVK 2399 5020 -502 2 712 856 114 19 45 chrX 16671335 16671516 -149978780 + L1_Mus3 LINE L1 6475 6638 0 2 712 24 32 0 0 chrX 16671841 16671872 -149978424 + AT_rich Low_complexity Low_complexity 1 31 0 2 712 2687 112 76 8 chrX 16671972 16672447 -149977849 + RLTR42-int LTR ERVK 5016 5522 0 2 712 990 209 109 27 chrX 16672447 16672668 -149977628 + RLTR42 LTR ERVK 1 239 0 2 712 1773 212 80 8 chrX 16672870 16673245 -149977051 - MTD LTR MaLR 0 419 18 2 712 729 279 0 0 chrX 16673532 16673672 -149976624 + RSINE1 SINE B4 1 140 -25 2 712 204 97 0 0 chrX 16673672 16673703 -149976593 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 712 219 36 0 0 chrX 16673787 16673815 -149976481 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 712 300 172 0 0 chrX 16673886 16673944 -149976352 + (TA)n Simple_repeat Simple_repeat 2 59 0 2 712 509 350 30 43 chrX 16674948 16675112 -149975184 + RSINE1 SINE B4 4 165 0 2 712 212 281 138 116 chrX 16674953 16675134 -149975162 + B2_Mm2 SINE B2 7 191 -4 2 712 796 259 40 98 chrX 16675183 16675560 -149974736 - ORR1E LTR MaLR -4 355 1 2 712 802 178 133 48 chrX 16675620 16675833 -149974463 + MTD LTR MaLR 180 421 0 2 712 323 343 9 53 chrX 16678236 16678350 -149971946 - MER5A DNA MER1_type -13 176 68 2 712 180 0 0 0 chrX 16678353 16678373 -149971923 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 2 712 371 269 0 55 chrX 16678383 16678493 -149971803 + ID_B1 SINE B4 63 166 -58 2 712 381 272 0 11 chrX 16678411 16678504 -149971792 + PB1D10 SINE Alu 5 96 -21 2 712 228 266 109 0 chrX 16678505 16678569 -149971727 + ID4_ SINE ID 3 73 -10 2 712 467 410 61 34 chrX 16678852 16679261 -149971035 - LTR16C LTR ERVL -68 421 2 2 712 4581 142 8 0 chrX 16679867 16680672 -149969624 - L1_Mur2 LINE L1 -1157 4720 3910 2 712 6671 122 19 2 chrX 16680671 16682340 -149967956 + Lx LINE L1 4955 6653 -1 2 712 222 37 0 0 chrX 16683425 16683452 -149966844 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 712 775 265 125 13 chrX 16683581 16684263 -149966033 + L1MA4 LINE L1 5088 5936 -355 3 712 2117 129 3 21 chrX 16684626 16684959 -149965337 + ORR1A2 LTR MaLR 1 327 0 3 712 2603 94 29 11 chrX 16685295 16685671 -149964625 + RLTR9A2 LTR ERVK 1 383 0 3 712 397 317 80 46 chrX 16685948 16686123 -149964173 + MER5A DNA MER1_type 1 181 -8 3 712 243 0 0 0 chrX 16686359 16686386 -149963910 + (T)n Simple_repeat Simple_repeat 1 27 0 3 712 416 223 177 9 chrX 16686590 16686703 -149963593 - MER5A1 DNA MER1_type -1 165 34 3 712 416 223 177 9 chrX 16686927 16687040 -149963256 - MER5A1 DNA MER1_type -1 165 34 3 712 363 295 0 0 chrX 16687430 16687508 -149962788 + ID4_ SINE ID 2 79 -4 3 712 376 309 8 38 chrX 16687853 16687984 -149962312 - PB1 SINE Alu 0 127 1 3 712 3069 124 146 9 chrX 16688005 16688566 -149961730 - Lx4A LINE L1 -4 7054 6417 3 712 375 278 131 48 chrX 16688614 16688905 -149961391 - L1ME1 LINE L1 -204 5975 5661 3 712 323 261 135 42 chrX 16688942 16689038 -149961258 - PB1D10 SINE Alu -7 110 6 3 712 625 236 212 33 chrX 16689087 16689389 -149960907 - RLTR9A LTR ERVK -12 356 1 3 712 323 320 0 26 chrX 16689886 16690037 -149960259 - ETnERV2-int LTR ERVK -1195 6211 6065 3 712 1351 151 144 71 chrX 16690037 16690545 -149959751 - RMER16-int LTR ERVK -4557 849 255 3 712 683 231 191 38 chrX 16690965 16691284 -149959012 - RLTR9A LTR ERVK 0 368 1 3 712 307 294 95 10 chrX 16691337 16691559 -149958737 - L1ME1 LINE L1 -741 5603 5362 3 712 291 282 140 51 chrX 16691655 16692104 -149958192 - L1ME1 LINE L1 -2130 4016 3528 3 712 2210 137 95 23 chrX 16692290 16692625 -149957671 + RLTR20B2 LTR ERVK 97 464 -96 3 712 369 0 0 0 chrX 16692625 16692666 -149957630 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 712 2210 137 95 23 chrX 16692666 16692763 -149957533 + RLTR20B2 LTR ERVK 465 560 0 3 712 32 43 0 0 chrX 16692783 16692829 -149957467 + AT_rich Low_complexity Low_complexity 1 46 0 3 712 630 255 30 60 chrX 16692838 16692865 -149957431 - RSINE1 SINE B4 0 165 142 3 712 306 0 0 0 chrX 16692865 16692899 -149957397 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 712 630 255 30 60 chrX 16692899 16693038 -149957258 - RSINE1 SINE B4 -24 141 4 3 712 307 240 0 10 chrX 16693099 16693200 -149957096 + Lx6 LINE L1 7335 7434 -26 3 712 1001 281 92 4 chrX 16693211 16693668 -149956628 - L1MD1 LINE L1 -65 6177 5681 3 712 936 245 5 23 chrX 16694193 16694410 -149955886 + B3 SINE B2 1 213 -3 3 712 254 263 13 0 chrX 16694431 16694507 -149955789 + L1MEf LINE L1 2177 2253 -3989 3 712 2667 210 103 91 chrX 16694508 16695402 -149954894 + Lx7 LINE L1 6784 7688 -8 3 712 249 33 0 0 chrX 16695402 16695432 -149954864 + (CAA)n Simple_repeat Simple_repeat 1 30 0 3 712 231 289 0 0 chrX 16695476 16695528 -149954768 + ID SINE ID 4 55 -169 3 712 402 282 50 56 chrX 16695565 16695745 -149954551 + L1MEf LINE L1 2272 2450 -3696 3 712 394 110 267 18 chrX 16695752 16695867 -149954429 - B2_Mm1t SINE B2 -8 187 20 3 712 732 324 70 11 chrX 16695906 16696473 -149953823 + L1MEf LINE L1 2533 3133 -3013 3 712 363 296 9 18 chrX 16696504 16696614 -149953682 + PB1D7 SINE Alu 1 109 -11 3 712 23 33 0 0 chrX 16696756 16696786 -149953510 + AT_rich Low_complexity Low_complexity 1 30 0 3 712 274 242 40 40 chrX 16696949 16697048 -149953248 + L1MEf LINE L1 3494 3592 -2554 3 712 355 175 0 24 chrX 16697048 16697130 -149953166 - MERVL_2A-int LTR ERVL -27 5734 5655 3 712 441 264 122 73 chrX 16697265 16697423 -149952873 + L1MB5 LINE L1 5867 6032 -142 3 712 471 235 0 57 chrX 16697423 16697545 -149952751 - PB1D9 SINE Alu -3 117 3 3 712 441 264 122 73 chrX 16697545 16697672 -149952624 + L1MB5 LINE L1 6033 6166 -8 3 712 22 0 0 0 chrX 16697709 16697731 -149952565 + AT_rich Low_complexity Low_complexity 1 22 0 3 712 828 300 60 49 chrX 16697786 16698144 -149952152 + L1MEf LINE L1 4461 4827 -1319 3 712 1346 56 79 0 chrX 16698144 16698303 -149951993 + B2_Mm1a SINE B2 2 160 -33 3 712 459 0 0 0 chrX 16698303 16698354 -149951942 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 3 712 1346 56 79 0 chrX 16698354 16698372 -149951924 + B2_Mm1a SINE B2 161 192 -1 3 712 828 300 60 49 chrX 16698372 16698465 -149951831 + L1MEf LINE L1 4828 4917 -1229 3 712 1752 141 6 25 chrX 16698465 16698792 -149951504 + RMER16-int LTR ERVK 1612 1932 -5474 3 712 8620 94 35 0 chrX 16698792 16698962 -149951334 + L1_Mm LINE L1 4461 4630 -1253 3 712 210 37 0 0 chrX 16698962 16698989 -149951307 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 3 712 8620 94 35 0 chrX 16698989 16700105 -149950191 + L1_Mm LINE L1 4631 5790 -93 3 712 4534 78 9 0 chrX 16700102 16700739 -149949557 + L1_Mus1 LINE L1 5879 6521 -46 3 712 1727 56 43 0 chrX 16700745 16700979 -149949317 - L1Md_F2 LINE L1 -396 6186 5943 3 712 6627 171 33 29 chrX 16700979 16701442 -149948854 + RMER16-int LTR ERVK 2402 2856 -2550 3 712 344 72 43 14 chrX 16701442 16701512 -149948784 + (TA)n Simple_repeat Simple_repeat 2 73 0 3 712 6627 182 32 28 chrX 16701512 16702679 -149947617 + RMER16-int LTR ERVK 2857 3865 -1541 3 712 342 163 45 23 chrX 16702849 16702937 -149947359 + RMER16-int LTR ERVK 6336 6425 -981 3 712 2429 226 121 18 chrX 16703152 16703896 -149946400 - Lx8 LINE L1 -403 7070 6250 3 712 414 100 0 0 chrX 16703974 16704034 -149946262 + (A)n Simple_repeat Simple_repeat 1 60 0 3 712 398 252 12 164 chrX 16704277 16704448 -149945848 - RSINE1 SINE B4 -19 146 2 3 712 297 0 0 0 chrX 16704707 16704740 -149945556 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 712 24 32 0 0 chrX 16709313 16709344 -149940952 + AT_rich Low_complexity Low_complexity 1 31 0 3 712 746 285 6 23 chrX 16709611 16709787 -149940509 + B3A SINE B2 2 174 -24 3 712 212 254 0 60 chrX 16709977 16710044 -149940252 + GA-rich Low_complexity Low_complexity 4 66 0 3 712 363 305 56 21 chrX 16710487 16710631 -149939665 + B1F1 SINE Alu 1 149 0 3 712 418 297 16 56 chrX 16710890 16711015 -149939281 - RSINE1 SINE B4 0 165 46 3 712 189 236 73 0 chrX 16711568 16711623 -149938673 + L3 LINE CR1 4353 4411 -78 3 712 302 293 107 50 chrX 16712108 16712248 -149938048 + MLT1C LTR MaLR 1 148 -319 3 712 900 304 119 24 chrX 16712364 16712866 -149937430 + Lx8 LINE L1 6924 7473 0 3 712 399 346 68 26 chrX 16713152 16713386 -149936910 - MIR SINE MIR -13 249 6 3 712 37 23 0 0 chrX 16713957 16714001 -149936295 + AT_rich Low_complexity Low_complexity 1 44 0 3 712 321 243 14 0 chrX 16714957 16715027 -149935269 - ID4 SINE ID -11 72 2 3 712 864 369 55 51 chrX 16715182 16715653 -149934643 + LTR16C LTR ERVL 1 473 -16 3 712 477 0 0 0 chrX 16716061 16716114 -149934182 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 712 830 158 4 18 chrX 16716541 16716764 -149933532 + CT-rich Low_complexity Low_complexity 1 220 0 3 712 599 71 12 0 chrX 16716750 16716835 -149933461 + (TC)n Simple_repeat Simple_repeat 2 87 0 3 712 281 205 33 88 chrX 16717415 16717432 -149932864 + MT2B2 LTR ERVL 153 164 -420 3 712 537 203 92 5 chrX 16717432 16717561 -149932735 + B1_Mur2 SINE Alu 3 149 0 3 712 634 356 88 51 chrX 16718471 16718903 -149931393 + LTR33 LTR ERVL 1 448 -67 3 712 902 265 162 46 chrX 16719166 16719494 -149930802 + MTE2a LTR MaLR 1 366 -13 3 712 2976 66 8 5 chrX 16719648 16720043 -149930253 + MTA_Mm LTR MaLR 1 396 0 3 712 241 313 226 5 chrX 16720280 16720479 -149929817 - MIRb SINE MIR -6 262 20 3 712 200 329 14 0 chrX 16720646 16720719 -149929577 + GA-rich Low_complexity Low_complexity 4 77 0 3 712 223 260 0 0 chrX 16721146 16721196 -149929100 + GA-rich Low_complexity Low_complexity 3 52 0 3 712 509 316 47 110 chrX 16721303 16721458 -149928838 - MER2 DNA MER2_type -3 342 224 3 712 582 198 258 0 chrX 16721458 16721625 -149928671 - B3 SINE B2 -6 210 1 3 712 509 316 47 110 chrX 16721625 16721832 -149928464 - MER2 DNA MER2_type -122 223 3 3 712 302 383 35 23 chrX 16722067 16722238 -149928058 - LTR33 LTR ERVL -342 173 1 3 712 297 292 0 14 chrX 16722423 16722496 -149927800 - ID4_ SINE ID -9 74 3 3 712 214 264 38 0 chrX 16722515 16722568 -149927728 + MIRb SINE MIR 37 91 -177 3 712 302 151 0 0 chrX 16722801 16722854 -149927442 + MurERV4_19-int LTR ERVK 2411 2463 -3317 3 712 1278 95 0 0 chrX 16722855 16723024 -149927272 - L1_Mus3 LINE L1 -370 6268 6100 3 712 3129 173 36 92 chrX 16723024 16723686 -149926610 - RMER19B LTR ERVK -277 625 1 3 712 292 293 210 10 chrX 16723852 16723952 -149926344 + ID_B1 SINE B4 90 209 -15 3 712 910 86 7 0 chrX 16725931 16726083 -149924213 + RMER17B LTR ERVK 311 463 -495 3 712 633 289 34 23 chrX 16726279 16726456 -149923840 - B3A SINE B2 -18 180 2 3 712 25 0 0 0 chrX 16726478 16726503 -149923793 + AT_rich Low_complexity Low_complexity 1 25 0 3 712 225 94 0 0 chrX 16726532 16726564 -149923732 + (CATATA)n Simple_repeat Simple_repeat 5 36 0 3 712 323 0 48 0 chrX 16726989 16727031 -149923265 + (CAAAAA)n Simple_repeat Simple_repeat 1 44 0 3 712 645 323 90 0 chrX 16727845 16728046 -149922250 + MLT1A LTR MaLR 156 374 0 3 712 242 300 108 20 chrX 16728118 16728220 -149922076 - L2 LINE L2 -682 2737 2627 3 712 739 302 15 15 chrX 16728411 16728606 -149921690 - B3 SINE B2 -13 203 9 3 712 468 0 0 0 chrX 16728610 16728662 -149921634 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 712 327 204 22 169 chrX 16728694 16728830 -149921466 - L2 LINE L2 -1032 2387 2272 3 712 325 348 24 101 chrX 16729046 16729382 -149920914 + L2 LINE L2 2657 2966 -453 3 712 1050 97 7 0 chrX 16729965 16730110 -149920186 + B1_Mus2 SINE Alu 2 147 0 3 712 579 29 0 0 chrX 16730126 16730195 -149920101 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 712 339 292 55 106 chrX 16730326 16730544 -149919752 + HAL1 LINE L1 78 284 -2223 3 712 718 92 3 1 chrX 16730766 16730890 -149919406 + L1_Mur1 LINE L1 1319 1443 -4443 3 712 787 271 107 10 chrX 16730894 16731185 -149919111 + Lx4B LINE L1 6736 7054 -4 3 712 183 146 0 0 chrX 16731360 16731401 -149918895 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 712 337 238 50 45 chrX 16731646 16731844 -149918452 + HAL1 LINE L1 990 1188 -1319 3 712 811 294 111 20 chrX 16732915 16733266 -149917030 + MARNA DNA Mariner 191 573 -13 3 712 182 312 38 25 chrX 16736340 16736419 -149913877 - MIRc SINE MIR -120 148 69 3 712 1360 82 6 0 chrX 16736521 16736704 -149913592 + B2_Mm1t SINE B2 2 185 -8 3 712 222 351 30 45 chrX 16737698 16737832 -149912464 + MIRb SINE MIR 91 222 -46 3 712 378 0 0 0 chrX 16739039 16739081 -149911215 + (TAA)n Simple_repeat Simple_repeat 2 43 0 3 712 637 226 91 27 chrX 16739161 16739347 -149910949 + B3A SINE B2 1 198 0 4 712 238 370 12 12 chrX 16740162 16740244 -149910052 - ID4_ SINE ID 0 83 2 4 712 367 291 35 21 chrX 16740264 16740408 -149909888 - B1F1 SINE Alu -2 147 2 4 712 4281 53 12 11 chrX 16740529 16741087 -149909209 + L1_Mus3 LINE L1 6079 6637 -1 4 712 256 333 0 0 chrX 16741279 16741345 -149908951 - ID4 SINE ID 0 83 18 4 712 262 221 0 21 chrX 16741380 16741477 -149908819 + GA-rich Low_complexity Low_complexity 4 98 0 4 712 225 163 0 0 chrX 16741963 16742006 -149908290 - L1MB4 LINE L1 0 6180 6138 4 712 1330 237 53 34 chrX 16742042 16742422 -149907874 - L1MB5 LINE L1 -126 6048 5662 4 712 625 284 49 21 chrX 16742423 16742567 -149907729 - B1F SINE Alu -1 148 1 4 712 306 360 0 58 chrX 16742567 16742606 -149907690 - B4A SINE B4 -207 85 54 4 712 673 212 78 50 chrX 16742855 16742991 -149907305 + B3A SINE B2 14 159 -39 4 712 288 0 0 0 chrX 16742991 16743023 -149907273 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 712 673 212 78 50 chrX 16743023 16743065 -149907231 + B3A SINE B2 160 197 -1 4 712 181 369 74 54 chrX 16744186 16744335 -149905961 + MIRc SINE MIR 2 153 -115 4 712 527 331 87 50 chrX 16744368 16744971 -149905325 + L2a LINE L2 2798 3425 -1 4 712 184 246 101 0 chrX 16744976 16745045 -149905251 + MIRb SINE MIR 184 259 -9 4 712 21 36 0 0 chrX 16746457 16746485 -149903811 + AT_rich Low_complexity Low_complexity 1 28 0 4 712 203 308 15 0 chrX 16746553 16746618 -149903678 + GA-rich Low_complexity Low_complexity 4 69 0 4 712 39 0 0 0 chrX 16746816 16746855 -149903441 + AT_rich Low_complexity Low_complexity 1 39 0 4 712 25 51 0 0 chrX 16747066 16747105 -149903191 + AT_rich Low_complexity Low_complexity 1 39 0 4 712 3266 71 7 0 chrX 16747799 16748219 -149902077 - L1Md_F2 LINE L1 -217 6365 5943 4 712 1417 33 28 0 chrX 16748219 16748400 -149901896 + L1Md_A LINE L1 6397 6582 0 4 712 358 339 17 23 chrX 16748456 16748631 -149901665 - MIR SINE MIR -38 224 51 4 712 306 0 0 0 chrX 16749067 16749101 -149901195 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 4 712 633 193 14 41 chrX 16749104 16749250 -149901046 - B1_Mur4 SINE Alu -6 144 3 4 712 291 104 0 0 chrX 16750386 16750434 -149899862 + (GGAA)n Simple_repeat Simple_repeat 4 51 0 4 712 24 0 0 0 chrX 16750608 16750632 -149899664 + AT_rich Low_complexity Low_complexity 1 24 0 4 712 324 0 0 0 chrX 16750900 16750936 -149899360 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 712 842 243 16 33 chrX 16751345 16751528 -149898768 + B3A SINE B2 3 182 -16 4 712 586 325 13 7 chrX 16752021 16752173 -149898123 + RSINE1 SINE B4 9 161 -4 4 712 513 0 0 0 chrX 16752185 16752242 -149898054 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 712 264 200 0 0 chrX 16752287 16752337 -149897959 + MurSatRep1 Unknown Unknown 233 282 -1855 4 712 550 203 27 229 chrX 16754073 16754335 -149895961 - B3 SINE B2 -6 210 2 4 712 758 236 107 30 chrX 16754424 16754621 -149895675 + B3 SINE B2 5 216 0 4 712 242 366 68 21 chrX 16755004 16755194 -149895102 + MIR SINE MIR 38 236 -26 4 712 279 312 55 9 chrX 16755237 16755347 -149894949 + B4A SINE B4 176 290 -2 4 712 198 103 0 0 chrX 16755376 16755405 -149894891 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 712 249 33 0 0 chrX 16756351 16756381 -149893915 + (A)n Simple_repeat Simple_repeat 1 30 0 4 712 1852 58 4 8 chrX 16756546 16756791 -149893505 - L1Md_F2 LINE L1 -12 6570 6327 4 712 306 0 0 0 chrX 16757493 16757527 -149892769 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 712 4302 77 29 0 chrX 16757682 16758241 -149892055 - MERVL-int LTR ERVL -848 4637 4063 4 712 743 251 119 54 chrX 16758293 16758588 -149891708 + L1MC4a LINE L1 7201 7514 -368 4 712 1057 234 299 14 chrX 16758718 16759142 -149891154 + RMER15 LTR ERVL 29 573 -2 4 712 949 257 41 38 chrX 16759144 16759459 -149890837 + L1MC4a LINE L1 7561 7876 -6 4 712 703 205 196 12 chrX 16759715 16759888 -149890408 + B3 SINE B2 8 212 -4 4 712 290 176 226 21 chrX 16760233 16760326 -149889970 + PB1D9 SINE Alu 1 112 -8 4 712 562 266 27 20 chrX 16760851 16760997 -149889299 + B1F SINE Alu 1 147 -2 4 712 22 56 0 0 chrX 16761753 16761789 -149888507 + AT_rich Low_complexity Low_complexity 1 36 0 4 712 2525 198 108 21 chrX 16761959 16762523 -149887773 + Lx9 LINE L1 6478 7090 -554 4 712 1512 181 122 0 chrX 16762544 16762847 -149887449 + RMER1C Other Other 992 1331 -11 4 712 807 223 94 30 chrX 16762865 16763031 -149887265 + B3 SINE B2 1 165 -51 4 712 276 30 0 0 chrX 16763031 16763064 -149887232 + (CATA)n Simple_repeat Simple_repeat 2 34 0 4 712 807 223 94 30 chrX 16763064 16763100 -149887196 + B3 SINE B2 166 214 -2 4 712 553 264 23 8 chrX 16763365 16763495 -149886801 - ID_B1 SINE B4 -8 216 85 4 712 619 302 8 0 chrX 16763556 16763685 -149886611 + RSINE1 SINE B4 28 157 -8 4 712 1012 223 110 23 chrX 16763737 16764104 -149886192 + L1ME2z LINE L1 5828 6226 -218 4 712 1793 285 34 80 chrX 16764137 16764821 -149885475 + Lx8 LINE L1 6764 7415 -58 4 712 27 62 0 0 chrX 16764827 16764875 -149885421 + AT_rich Low_complexity Low_complexity 1 48 0 4 712 752 178 15 0 chrX 16764923 16765058 -149885238 + B1_Mus2 SINE Alu 11 147 0 4 712 526 259 17 0 chrX 16766153 16766269 -149884027 + PB1 SINE Alu 3 120 -7 4 712 344 88 18 0 chrX 16766521 16766578 -149883718 + (CATA)n Simple_repeat Simple_repeat 2 59 0 4 712 305 345 52 83 chrX 16766686 16767049 -149883247 - L1M5 LINE L1 -1254 4892 4541 4 712 712 231 21 0 chrX 16767335 16767478 -149882818 + B1F2 SINE Alu 2 147 -2 4 712 417 228 153 37 chrX 16768035 16768277 -149882019 - L1MA9 LINE L1 -15 6297 6028 4 712 289 375 46 29 chrX 16768295 16768468 -149881828 + MLT1N2 LTR MaLR 49 224 -338 4 712 616 331 17 0 chrX 16768635 16768810 -149881486 + MLT1N2 LTR MaLR 344 521 -41 4 712 1175 29 7 0 chrX 16769075 16769214 -149881082 + B1_Mus1 SINE Alu 1 140 -8 4 712 242 250 0 0 chrX 16769216 16769304 -149880992 + A-rich Low_complexity Low_complexity 1 88 0 4 712 310 299 0 114 chrX 16769312 16769342 -149880954 + PB1D10 SINE Alu 1 30 -87 4 712 2320 46 0 0 chrX 16769342 16769626 -149880670 - L1Md_A LINE L1 0 6582 6299 4 712 310 299 0 114 chrX 16769626 16769727 -149880569 + PB1D10 SINE Alu 31 117 0 4 712 786 288 57 53 chrX 16769728 16770010 -149880286 + B4A SINE B4 10 292 0 4 712 344 103 17 0 chrX 16770010 16770068 -149880228 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 712 2896 76 0 3 chrX 16770348 16770730 -149879566 - L1_Mus2 LINE L1 -2 6564 6184 4 712 331 365 115 39 chrX 16770890 16771098 -149879198 - MIRb SINE MIR -18 250 27 4 712 606 291 44 20 chrX 16771805 16772008 -149878288 + B3 SINE B2 3 210 -6 4 712 324 0 0 0 chrX 16772016 16772052 -149878244 + (A)n Simple_repeat Simple_repeat 1 36 0 4 712 3380 61 11 2 chrX 16772810 16773251 -149877045 + L1_Mus2 LINE L1 6122 6566 0 4 712 669 274 34 17 chrX 16773670 16773848 -149876448 + B3A SINE B2 2 182 -16 4 712 261 0 0 0 chrX 16773867 16773896 -149876400 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 4 712 309 325 43 55 chrX 16774687 16774850 -149875446 + ORR1D1 LTR MaLR 214 374 0 4 712 207 0 0 0 chrX 16775037 16775060 -149875236 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 712 306 0 0 0 chrX 16775060 16775094 -149875202 + (CAT)n Simple_repeat Simple_repeat 1 34 0 4 712 257 353 43 28 chrX 16775253 16775453 -149874843 - L2b LINE L2 -300 3087 2883 4 712 690 110 47 0 chrX 16776650 16776777 -149873519 - Lx5 LINE L1 -3 7047 6915 4 713 25 31 0 0 chrX 16777292 16777324 -149872972 + AT_rich Low_complexity Low_complexity 1 32 0 4 713 1763 118 11 7 chrX 16777743 16778025 -149872271 + L1_Mus3 LINE L1 6352 6634 -4 4 713 1258 290 96 23 chrX 16778412 16778924 -149871372 - Lx8 LINE L1 -36 7437 6889 4 713 784 305 65 45 chrX 16779904 16780246 -149870050 - Tigger5 DNA MER2_type -7 359 15 4 713 339 364 57 31 chrX 16780345 16780538 -149869758 - MIR SINE MIR -57 205 8 4 713 447 328 60 60 chrX 16780699 16780965 -149869331 + LTR16B1 LTR ERVL 188 453 -27 4 713 208 53 26 26 chrX 16781204 16781243 -149869053 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 713 279 344 10 0 chrX 16781254 16781350 -149868946 + PB1D10 SINE Alu 21 117 0 4 713 917 265 86 23 chrX 16782246 16782594 -149867702 + L1MA4 LINE L1 5519 5888 -412 4 713 377 317 66 8 chrX 16782832 16782953 -149867343 + PB1D10 SINE Alu 1 128 -21 4 713 192 213 0 0 chrX 16782980 16783041 -149867255 + GA-rich Low_complexity Low_complexity 2 62 0 4 713 229 344 53 83 chrX 16783086 16783219 -149867077 + LTR16B2 LTR ERVL 332 460 -2 4 713 363 263 10 48 chrX 16783541 16783645 -149866651 + MER63B DNA AcHobo 312 411 -25 4 713 1093 65 0 7 chrX 16783935 16784074 -149866222 - B1_Mus1 SINE Alu -10 138 1 4 713 2645 77 11 3 chrX 16784083 16784447 -149865849 - L1Md_F2 LINE L1 -11 6571 6205 4 713 6738 70 46 3 chrX 16785016 16785921 -149864375 + L1_Mus4 LINE L1 5654 6597 -39 4 713 596 301 95 38 chrX 16786023 16786164 -149864132 + B4 SINE B4 68 218 -74 4 713 230 0 33 0 chrX 16786164 16786194 -149864102 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 713 596 301 95 38 chrX 16786194 16786263 -149864033 + B4 SINE B4 219 290 -2 4 713 1181 35 28 0 chrX 16786806 16786949 -149863347 + B1_Mm SINE Alu 1 147 0 4 713 219 36 0 0 chrX 16786958 16786986 -149863310 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 4 713 435 239 98 0 chrX 16787027 16787119 -149863177 + PB1D10 SINE Alu 10 110 -7 5 713 284 180 62 47 chrX 16787062 16787126 -149863170 + ID_B1 SINE B4 160 224 0 5 713 1257 319 112 48 chrX 16788472 16789333 -149860963 + L2a LINE L2 1969 2884 -535 5 713 384 306 14 77 chrX 16789410 16789619 -149860677 + L2a LINE L2 3218 3413 -13 5 713 681 221 7 14 chrX 16789700 16789847 -149860449 - URR1B DNA MER1_type -15 210 65 5 713 721 265 53 5 chrX 16790119 16790309 -149859987 + B3 SINE B2 1 199 -17 5 713 225 390 26 26 chrX 16790532 16790724 -149859572 + MIRc SINE MIR 51 242 -26 5 713 268 328 62 31 chrX 16791301 16791430 -149858866 - MER5A DNA MER1_type -3 186 54 5 713 410 32 16 0 chrX 16791461 16791524 -149858772 + L1Md_F2 LINE L1 6519 6582 0 5 713 1068 306 39 21 chrX 16792163 16792497 -149857799 + MER58B DNA MER1_type 1 340 -1 5 713 180 229 42 0 chrX 16793984 16794032 -149856264 - L3 LINE CR1 -3477 1012 963 5 713 229 26 53 0 chrX 16795738 16795776 -149854520 + (TTTTTG)n Simple_repeat Simple_repeat 1 40 0 5 713 1194 68 0 0 chrX 16795776 16795923 -149854373 - B1_Mm SINE Alu 0 147 1 5 713 544 288 15 8 chrX 16796053 16796186 -149854110 + B1F1 SINE Alu 1 134 -15 5 713 886 244 132 0 chrX 16796774 16797024 -149853272 + B4A SINE B4 3 285 -7 5 713 23 0 0 0 chrX 16797675 16797698 -149852598 + AT_rich Low_complexity Low_complexity 1 23 0 5 713 324 182 26 0 chrX 16798517 16798594 -149851702 - Lx7 LINE L1 -17 7679 7601 5 713 459 175 78 17 chrX 16798820 16798935 -149851361 + MER2 DNA MER2_type 94 215 -130 5 713 352 312 29 19 chrX 16798935 16799041 -149851255 + PB1D10 SINE Alu 1 118 -9 5 713 285 357 24 8 chrX 16799062 16799189 -149851107 + MER2 DNA MER2_type 216 344 -1 5 713 1299 61 0 38 chrX 16799562 16799748 -149850548 + L1_Mus1 LINE L1 6388 6566 -1 5 713 281 275 89 48 chrX 16799995 16800163 -149850133 + MIRb SINE MIR 52 226 -42 5 713 38 61 0 0 chrX 16800420 16800486 -149849810 + AT_rich Low_complexity Low_complexity 1 66 0 5 713 423 369 37 82 chrX 16800592 16800837 -149849459 - B4A SINE B4 -56 236 3 5 713 385 295 78 0 chrX 16801387 16801516 -149848780 - ID_B1 SINE B4 -2 222 84 5 713 876 249 31 57 chrX 16801559 16801912 -149848384 + RLTR15 LTR ERVK 1 344 -15 5 713 222 268 121 9 chrX 16802188 16802297 -149847999 + L2c LINE L2 3298 3426 0 5 713 374 270 28 21 chrX 16802744 16802900 -149847396 - MIRb SINE MIR -95 181 19 5 713 252 59 0 0 chrX 16803075 16803109 -149847187 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 713 260 159 0 0 chrX 16803341 16803385 -149846911 + MTD LTR MaLR 18 61 -358 5 713 2078 122 73 3 chrX 16804053 16804397 -149845899 + RLTR9A LTR ERVK 1 368 0 5 713 246 288 123 0 chrX 16804518 16804591 -149845705 - ID4 SINE ID -1 82 1 5 713 3017 43 24 3 chrX 16804743 16805119 -149845177 + L1Md_F3 LINE L1 6199 6582 -2 5 713 206 321 0 0 chrX 16805144 16805197 -149845099 + (TATG)n Simple_repeat Simple_repeat 3 55 0 5 713 668 107 16 0 chrX 16806487 16806608 -149843688 + L1_Mus4 LINE L1 6511 6633 -3 5 713 514 288 72 0 chrX 16806759 16806884 -149843412 + B1F2 SINE Alu 9 142 -7 5 713 619 322 88 97 chrX 16808604 16808924 -149841372 - LTR40a LTR ERVL -200 319 3 5 713 226 193 34 34 chrX 16809147 16809206 -149841090 - L2b LINE L2 -5 3370 3312 5 713 526 287 149 38 chrX 16809621 16809882 -149840414 + B4A SINE B4 1 290 -2 5 713 1040 234 215 10 chrX 16809923 16810230 -149840066 + ORR1D2 LTR MaLR 1 370 0 5 713 187 302 73 32 chrX 16810456 16810579 -149839717 - MIRb SINE MIR -120 148 21 5 713 227 103 0 25 chrX 16810997 16811037 -149839259 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 5 713 940 275 66 4 chrX 16812484 16812758 -149837538 - B4A SINE B4 0 292 2 5 713 546 308 11 5 chrX 16812823 16813009 -149837287 + MER53 DNA hAT 7 193 0 5 713 886 262 24 5 chrX 16813249 16813456 -149836840 + B3 SINE B2 1 211 -5 5 713 205 171 0 0 chrX 16813595 16813636 -149836660 + (TTG)n Simple_repeat Simple_repeat 2 42 0 5 713 972 148 116 32 chrX 16813643 16813832 -149836464 - MTB_Mm LTR MaLR 0 407 203 5 713 356 183 0 16 chrX 16813818 16813879 -149836417 - MTB_Mm LTR MaLR -345 62 3 5 713 658 262 0 0 chrX 16813881 16814026 -149836270 - B1_Mm SINE Alu -1 146 2 5 713 447 68 0 0 chrX 16815126 16815185 -149835111 + (TG)n Simple_repeat Simple_repeat 1 59 0 5 713 1639 22 0 0 chrX 16815277 16815461 -149834835 - B2_Mm1t SINE B2 -7 186 3 5 713 459 0 0 0 chrX 16816018 16816069 -149834227 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 713 306 277 46 65 chrX 16816478 16816586 -149833710 + MTEb LTR MaLR 1 106 -273 5 713 251 302 83 23 chrX 16816586 16816610 -149833686 + MLT2B2 LTR ERVL 1 140 -375 5 713 282 56 0 0 chrX 16816826 16816862 -149833434 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 713 11528 95 11 5 chrX 16817109 16819475 -149830821 - L1_Mus2 LINE L1 0 6566 4188 5 713 4964 92 1 1 chrX 16819468 16820182 -149830114 + L1_Mus2 LINE L1 3496 4209 -1674 5 713 23 0 0 0 chrX 16820910 16820933 -149829363 + AT_rich Low_complexity Low_complexity 1 23 0 5 713 293 289 45 91 chrX 16821305 16821503 -149828793 - RMER10A LTR ERVL -25 417 229 5 713 272 299 39 0 chrX 16821712 16821789 -149828507 + RSINE1 SINE B4 58 137 -28 5 713 416 277 81 74 chrX 16821911 16822059 -149828237 + B1F SINE Alu 1 149 0 5 713 572 286 12 18 chrX 16822145 16822309 -149827987 - RSINE1 SINE B4 0 165 3 5 713 541 356 64 39 chrX 16822548 16822984 -149827312 + Kanga11a DNA Tc2 41 487 -483 5 713 442 248 67 25 chrX 16823244 16823364 -149826932 + PB1 SINE Alu 1 125 -2 5 713 24 0 0 0 chrX 16823486 16823510 -149826786 + AT_rich Low_complexity Low_complexity 1 24 0 5 713 1177 90 11 0 chrX 16824732 16824909 -149825387 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 5 713 371 349 74 0 chrX 16825096 16825245 -149825051 + RSINE1 SINE B4 1 160 -5 5 713 26 30 0 0 chrX 16825275 16825308 -149824988 + AT_rich Low_complexity Low_complexity 1 33 0 5 713 1038 76 13 40 chrX 16825638 16825789 -149824507 + B1_Mm SINE Alu 1 147 0 5 713 4605 45 3 0 chrX 16826100 16826822 -149823474 + L1Md_F3 LINE L1 5307 6030 -554 5 713 1639 213 61 15 chrX 16827781 16828177 -149822119 + Lx5 LINE L1 6634 7047 -3 5 713 207 235 29 29 chrX 16831976 16832046 -149818250 + L2a LINE L2 3105 3174 -252 5 713 316 328 42 33 chrX 16833113 16833233 -149817063 + ID_B1 SINE B4 2 122 -102 5 713 508 229 8 33 chrX 16833582 16833704 -149816592 - PB1D9 SINE Alu -1 119 1 5 713 649 316 18 6 chrX 16833724 16833893 -149816403 - B3A SINE B2 -27 171 1 5 713 265 297 0 26 chrX 16834171 16834247 -149816049 + ID4_ SINE ID 8 81 -2 5 713 228 137 0 0 chrX 16835148 16835199 -149815097 + (T)n Simple_repeat Simple_repeat 1 51 0 5 713 969 72 58 0 chrX 16835202 16835341 -149814955 - B1_Mm SINE Alu 0 147 1 5 713 288 0 0 0 chrX 16835801 16835833 -149814463 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 713 819 210 0 0 chrX 16835833 16835971 -149814325 - B1_Mm SINE Alu -9 138 1 5 713 1206 34 0 0 chrX 16836078 16836225 -149814071 + B1_Mus2 SINE Alu 1 147 0 5 713 928 142 59 0 chrX 16836341 16836510 -149813786 + URR1A DNA MER1_type 48 226 0 5 713 423 243 28 37 chrX 16837070 16837177 -149813119 - PB1D9 SINE Alu -1 119 14 5 713 462 265 154 32 chrX 16837215 16837371 -149812925 - B3A SINE B2 -23 175 1 5 713 243 0 0 0 chrX 16837401 16837428 -149812868 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 5 713 410 314 55 60 chrX 16838857 16839036 -149811260 + B3A SINE B2 6 189 -27 5 713 343 233 27 0 chrX 16839603 16839676 -149810620 - PB1D10 SINE Alu -10 107 33 5 713 365 181 0 31 chrX 16839827 16839924 -149810372 + Lx4A LINE L1 6963 7056 -2 5 713 27 0 0 0 chrX 16839924 16839951 -149810345 + AT_rich Low_complexity Low_complexity 1 27 0 5 713 735 201 56 0 chrX 16840077 16840221 -149810075 + RSINE1 SINE B4 2 153 -12 5 713 26 0 0 0 chrX 16840227 16840253 -149810043 + AT_rich Low_complexity Low_complexity 1 26 0 5 713 3006 74 2 0 chrX 16840290 16840683 -149809613 + L1_Mus1 LINE L1 6172 6565 -2 5 713 589 272 77 25 chrX 16841118 16841314 -149808982 - B3 SINE B2 -7 209 4 5 713 213 250 0 15 chrX 16841323 16841388 -149808908 + (TTA)n Simple_repeat Simple_repeat 2 65 0 5 713 1423 205 77 6 chrX 16841582 16841906 -149808390 + RMER1C Other Other 992 1338 -4 5 713 189 349 71 0 chrX 16842817 16842943 -149807353 - MIR SINE MIR -40 222 88 5 713 269 292 9 19 chrX 16843290 16843398 -149806898 + A-rich Low_complexity Low_complexity 2 108 0 5 713 23 0 0 0 chrX 16844254 16844277 -149806019 + AT_rich Low_complexity Low_complexity 1 23 0 5 713 306 197 0 0 chrX 16844315 16844376 -149805920 + L1ME3 LINE L1 5913 5973 -189 5 713 689 249 87 22 chrX 16844389 16844574 -149805722 + B3A SINE B2 1 197 -1 5 713 755 285 28 24 chrX 16844588 16844800 -149805496 + B3 SINE B2 1 213 -3 5 713 713 301 15 0 chrX 16844803 16845002 -149805294 + B3 SINE B2 2 203 -13 5 713 318 250 143 0 chrX 16845113 16845225 -149805071 + L1MC4a LINE L1 7741 7868 -14 5 713 443 196 28 38 chrX 16845504 16845610 -149804686 + MLT1B LTR MaLR 220 324 -66 5 713 723 169 93 33 chrX 16845617 16845800 -149804496 - B2_Mm2 SINE B2 -1 194 1 6 713 2251 116 59 8 chrX 16845893 16846266 -149804030 - Lx2A1 LINE L1 -3 7005 6614 6 713 404 280 269 48 chrX 16846272 16846644 -149803652 - L1ME1 LINE L1 -25 6154 5701 6 713 926 267 71 8 chrX 16846665 16846933 -149803363 + B4 SINE B4 3 287 -5 6 713 807 285 14 0 chrX 16847012 16847219 -149803077 + B3 SINE B2 1 210 -6 6 713 297 305 52 7 chrX 16847241 16847396 -149802900 - L1ME1 LINE L1 -473 5691 5530 6 713 3670 7 0 0 chrX 16847425 16847864 -149802432 + L1Md_A LINE L1 6163 6582 0 6 713 636 218 50 69 chrX 16847977 16848179 -149802117 + B3A SINE B2 1 198 0 6 713 22 0 0 0 chrX 16848204 16848226 -149802070 + AT_rich Low_complexity Low_complexity 1 22 0 6 713 582 199 125 16 chrX 16848994 16849178 -149801118 + MER90 LTR ERV1 3 206 -369 6 713 668 238 79 26 chrX 16849213 16849480 -149800816 + MER90 LTR ERV1 176 456 -119 6 713 751 234 137 58 chrX 16849523 16849764 -149800532 + B4 SINE B4 15 274 -18 6 713 249 83 0 0 chrX 16849790 16849826 -149800470 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 713 22 70 0 0 chrX 16849994 16850037 -149800259 + AT_rich Low_complexity Low_complexity 1 43 0 6 713 365 287 84 15 chrX 16850424 16850555 -149799741 - MIR3 SINE MIR -38 170 31 6 713 269 284 95 0 chrX 16850724 16850798 -149799498 - ID4 SINE ID 0 83 3 6 713 255 191 0 0 chrX 16850816 16850879 -149799417 + T-rich Low_complexity Low_complexity 1 63 0 6 713 428 281 20 20 chrX 16850879 16851028 -149799268 - B1F SINE Alu 0 149 1 6 713 573 300 69 38 chrX 16851356 16851644 -149798652 + MER96B DNA hAT 111 407 -10 6 713 557 222 60 26 chrX 16852491 16852713 -149797583 + RMER20A LTR ERVK 234 466 -161 6 713 2710 138 89 18 chrX 16852747 16853169 -149797127 + RLTR11A LTR ERVK 1 447 -81 6 713 441 0 0 0 chrX 16853169 16853218 -149797078 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 713 2710 138 89 18 chrX 16853218 16853288 -149797008 + RLTR11A LTR ERVK 448 526 -2 6 713 23 0 0 0 chrX 16853316 16853339 -149796957 + AT_rich Low_complexity Low_complexity 1 23 0 6 713 666 220 89 0 chrX 16853902 16854093 -149796203 + MYSERV16_I-int LTR ERVK 2117 2324 -2 6 713 2456 151 111 11 chrX 16854094 16854562 -149795734 + RLTR11A LTR ERVK 1 515 -13 6 713 248 413 8 31 chrX 16854624 16854754 -149795542 + RMER20A LTR ERVK 475 601 -26 6 713 1464 64 5 0 chrX 16854841 16855028 -149795268 - B2_Mm1a SINE B2 -5 188 1 6 713 455 352 124 29 chrX 16855028 16855376 -149794920 - LTR16A1 LTR ERVL -75 381 1 6 713 25 31 0 0 chrX 16855844 16855876 -149794420 + AT_rich Low_complexity Low_complexity 1 32 0 6 713 315 350 20 10 chrX 16856759 16856857 -149793439 + ID_B1 SINE B4 87 185 -39 6 713 261 327 90 9 chrX 16856857 16856870 -149793426 + B1F SINE Alu 6 125 -24 6 713 579 252 29 126 chrX 16857228 16857358 -149792938 + L1MA8 LINE L1 6013 6149 -142 6 713 591 240 20 40 chrX 16857358 16857510 -149792786 + B1_Mur1 SINE Alu 1 149 0 6 713 579 252 29 126 chrX 16857510 16857614 -149792682 + L1MA8 LINE L1 6150 6231 -60 6 713 3516 86 17 2 chrX 16857614 16858090 -149792206 - L1_Mus2 LINE L1 0 6566 6084 6 713 579 252 29 126 chrX 16858090 16858131 -149792165 + L1MA8 LINE L1 6232 6262 -29 6 713 820 282 58 4 chrX 16858190 16858432 -149791864 - MER2 DNA MER2_type -90 255 1 6 713 21 0 0 0 chrX 16858983 16859004 -149791292 + AT_rich Low_complexity Low_complexity 1 21 0 6 713 227 200 0 0 chrX 16860094 16860134 -149790162 + L1M4 LINE L1 5070 5109 -1037 6 713 251 238 0 12 chrX 16860141 16860222 -149790074 + Lx4B LINE L1 6975 7054 -4 6 713 36 0 0 0 chrX 16860266 16860302 -149789994 + AT_rich Low_complexity Low_complexity 1 36 0 6 713 448 265 154 0 chrX 16860742 16860859 -149789437 + B1F SINE Alu 1 135 -14 6 713 266 277 0 97 chrX 16861468 16861540 -149788756 + RSINE1 SINE B4 4 68 -97 6 713 949 330 139 28 chrX 16861739 16862431 -149787865 - L2 LINE L2 -692 2727 1959 6 713 267 277 28 47 chrX 16863094 16863200 -149787096 + RLTR14 LTR ERV1 279 382 0 6 713 895 212 82 5 chrX 16863869 16864063 -149786233 + B3 SINE B2 2 210 -6 6 713 46 0 0 0 chrX 16864065 16864111 -149786185 + AT_rich Low_complexity Low_complexity 1 46 0 6 713 237 310 108 0 chrX 16864189 16864291 -149786005 - PB1D10 SINE Alu -1 116 5 6 713 600 14 0 0 chrX 16865909 16865978 -149784318 + (TTCC)n Simple_repeat Simple_repeat 4 72 0 6 713 409 204 38 0 chrX 16866029 16866161 -149784135 + (TATATG)n Simple_repeat Simple_repeat 3 139 0 6 713 289 85 45 106 chrX 16866247 16866266 -149784030 - Lx8 LINE L1 -4 7469 7457 6 713 863 153 58 74 chrX 16866266 16866456 -149783840 + B2_Mm2 SINE B2 5 191 -4 6 713 289 85 45 106 chrX 16866456 16866502 -149783794 - Lx8 LINE L1 -17 7456 7408 6 713 400 280 80 0 chrX 16866506 16866606 -149783690 - Lx8 LINE L1 -220 7253 7146 6 713 636 273 196 0 chrX 16866606 16866800 -149783496 - B4A SINE B4 -60 232 1 6 713 250 244 35 82 chrX 16867079 16867164 -149783132 + ID2 SINE ID 1 81 -2 6 713 262 213 0 0 chrX 16867167 16867214 -149783082 - RSINE1 SINE B4 -115 50 4 6 713 293 346 19 9 chrX 16867233 16867338 -149782958 - PB1D10 SINE Alu 0 117 12 6 713 456 236 158 41 chrX 16868267 16868621 -149781675 + L1MD1 LINE L1 4672 5098 -1048 6 713 588 274 14 56 chrX 16868638 16868781 -149781515 + RSINE1 SINE B4 23 159 -6 6 713 359 215 173 16 chrX 16868809 16869017 -149781279 + L1MD1 LINE L1 5162 5410 -832 6 713 1128 218 9 4 chrX 16869042 16869268 -149781028 - MTD LTR MaLR 0 419 193 6 713 33291 86 13 2 chrX 16869270 16875176 -149775120 - L1Md_F2 LINE L1 -10 6572 602 6 713 519 275 109 23 chrX 16875182 16875357 -149774939 - MTD LTR MaLR -218 201 12 6 713 545 287 65 28 chrX 16875398 16875613 -149774683 + L1MD1 LINE L1 5455 5677 -682 6 713 627 277 45 13 chrX 16875613 16875770 -149774526 + RSINE1 SINE B4 4 165 0 6 713 528 293 57 26 chrX 16875790 16876018 -149774278 + L1MD1 LINE L1 5660 5894 -348 6 713 355 314 0 0 chrX 16876038 16876143 -149774153 + L1MD1 LINE L1 6084 6188 -54 6 713 447 160 13 0 chrX 16876202 16876277 -149774019 + B3A SINE B2 1 76 -122 6 713 459 267 168 64 chrX 16876664 16876754 -149773542 - RMER20B LTR ERVK -228 399 297 6 713 2118 136 3 3 chrX 16876754 16877079 -149773217 - ORR1A2 LTR MaLR 0 327 3 6 713 459 267 168 64 chrX 16877079 16877268 -149773028 - RMER20B LTR ERVK -331 296 91 6 713 229 184 58 116 chrX 16877445 16877477 -149772819 + Charlie12 DNA MER1_type 2067 2093 -780 6 713 921 188 139 26 chrX 16877477 16877790 -149772506 + MTD LTR MaLR 1 414 -5 6 713 31118 110 6 6 chrX 16877847 16883688 -149766608 + L1_Mus2 LINE L1 675 6566 0 6 713 520 277 36 97 chrX 16884181 16884334 -149765962 - MTE2a LTR MaLR 0 379 235 6 713 3122 162 60 10 chrX 16884334 16884921 -149765375 + RLTR18 LTR ERVK 1 616 0 6 713 520 277 36 97 chrX 16884921 16884963 -149765333 - MTE2a LTR MaLR -145 234 196 6 713 302 171 53 67 chrX 16885178 16885253 -149765043 + B1F SINE Alu 74 147 -2 6 713 1126 284 19 8 chrX 16885339 16885602 -149764694 + B4A SINE B4 26 291 -1 6 713 238 250 0 0 chrX 16885603 16885655 -149764641 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 713 18709 72 9 4 chrX 16885688 16891085 -149759211 + L1Md_F2 LINE L1 189 6332 -250 6 713 234 239 75 54 chrX 16891079 16891172 -149759124 - L1MB8 LINE L1 -122 6056 5962 6 713 405 0 0 0 chrX 16891216 16891261 -149759035 + (TA)n Simple_repeat Simple_repeat 1 45 0 6 713 285 285 179 0 chrX 16891356 16891479 -149758817 + B1F SINE Alu 3 147 -2 6 713 259 202 59 0 chrX 16891495 16891567 -149758729 - Lx7 LINE L1 -1937 5759 5660 6 713 213 39 0 0 chrX 16891645 16891671 -149758625 + (ATG)n Simple_repeat Simple_repeat 2 27 0 6 713 941 233 91 31 chrX 16891685 16892159 -149758137 - L1MB8 LINE L1 -481 5703 5197 6 713 295 303 107 23 chrX 16892180 16892396 -149757900 + L1MC4a LINE L1 5699 5932 -1950 6 713 775 190 207 0 chrX 16892936 16893115 -149757181 + B3 SINE B2 1 216 0 6 713 278 209 176 6 chrX 16893338 16893418 -149756878 + L1MD LINE L1 5186 5277 -869 6 713 290 26 26 0 chrX 16893418 16893457 -149756839 + (CAA)n Simple_repeat Simple_repeat 2 41 0 6 713 567 222 197 2 chrX 16893457 16893690 -149756606 + L1MD LINE L1 5278 5566 -778 6 713 390 180 117 53 chrX 16893708 16893802 -149756494 + ID_B1 SINE B4 114 213 -11 6 713 538 132 44 0 chrX 16893888 16893979 -149756317 - B1_Mur4 SINE Alu -13 137 43 6 713 823 192 45 11 chrX 16894146 16894325 -149755971 + B3A SINE B2 2 186 -12 6 713 346 274 42 68 chrX 16894627 16894825 -149755471 + L1ME3 LINE L1 5822 6017 -145 6 713 308 247 72 0 chrX 16894835 16894932 -149755364 - MER53 DNA hAT 0 193 90 6 713 242 172 347 41 chrX 16894965 16895086 -149755210 + L1ME3A LINE L1 6016 6173 0 6 713 259 252 143 9 chrX 16896004 16896116 -149754180 + MIRb SINE MIR 125 251 -17 6 713 392 283 16 53 chrX 16898212 16898348 -149751948 - PB1D7 SINE Alu -21 126 3 6 713 338 309 151 22 chrX 16898348 16898374 -149751922 - B4A SINE B4 -186 106 63 6 713 2008 126 3 71 chrX 16898420 16898771 -149751525 + ORR1A4 LTR MaLR 2 328 -1 6 713 498 159 22 22 chrX 16898801 16898891 -149751405 + PB1 SINE Alu 36 125 -2 6 713 220 250 23 0 chrX 16898945 16898989 -149751307 + ID2 SINE ID 9 53 -30 6 713 367 247 138 39 chrX 16899114 16899295 -149751001 - L1MC4 LINE L1 -289 7753 7555 6 713 273 308 21 42 chrX 16899582 16899677 -149750619 + RMER12 LTR ERVK 750 842 -480 6 713 719 349 18 35 chrX 16899655 16899937 -149750359 - B4A SINE B4 -6 286 10 6 713 3313 146 57 33 chrX 16900042 16900452 -149749844 - RMER6A LTR ERVK 0 756 320 6 713 846 30 0 0 chrX 16900452 16900553 -149749743 + (TC)n Simple_repeat Simple_repeat 2 102 0 6 713 3313 150 66 32 chrX 16900553 16900892 -149749404 - RMER6A LTR ERVK -342 348 4 6 713 245 323 67 0 chrX 16901016 16901180 -149749116 - L1MC4 LINE L1 -1479 6403 6229 6 713 341 245 17 94 chrX 16902034 16902151 -149748145 + B3A SINE B2 13 120 -78 6 713 255 350 0 0 chrX 16902229 16902309 -149747987 - ID4_ SINE ID -2 81 2 6 713 730 106 29 0 chrX 16902440 16902544 -149747752 + U6 snRNA snRNA 1 107 0 6 713 1361 137 0 0 chrX 16902544 16902749 -149747547 + Lx2 LINE L1 6747 6951 -46 6 713 378 0 0 0 chrX 16902762 16902804 -149747492 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 713 397 295 15 8 chrX 16902821 16902951 -149747345 + Lx8 LINE L1 6638 6768 -705 6 713 1963 181 19 11 chrX 16902958 16903321 -149746975 - ORR1D1 LTR MaLR -8 366 1 7 713 1770 192 127 8 chrX 16903321 16903714 -149746582 + Lx8 LINE L1 6767 7206 -267 6 713 235 26 50 25 chrX 16904085 16904125 -149746171 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 7 713 1681 244 26 6 chrX 16904131 16904482 -149745814 + MTD LTR MaLR 48 405 -14 7 713 483 293 69 9 chrX 16904548 16904765 -149745531 + L1MA5 LINE L1 6068 6297 -3 7 713 7271 110 13 1 chrX 16905371 16906749 -149743547 - L1_Mus3 LINE L1 -2 6636 5243 7 89 14811 114 55 19 chrX 16906751 16909806 -149740490 - L1_Mus3 LINE L1 0 6638 3477 7 714 183 42 0 0 chrX 16909806 16909830 -149740466 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 7 714 14811 131 12 26 chrX 16909830 16909857 -149740439 - L1_Mus3 LINE L1 -2407 3476 3450 7 714 1209 133 42 4 chrX 16909846 16910083 -149740213 - MusHAL1 LINE L1 -1589 1123 896 7 714 1816 35 9 4 chrX 16910091 16910321 -149739975 - L1Md_F3 LINE L1 -1 6583 6353 7 714 3079 169 11 48 chrX 16910322 16910932 -149739364 - L1VL1 LINE L1 -5638 784 197 7 714 475 227 119 7 chrX 16911709 16911860 -149738436 + L1MB5 LINE L1 3566 3733 -2413 7 714 251 295 12 71 chrX 16911871 16911955 -149738341 + ID4_ SINE ID 5 83 0 7 714 504 237 29 15 chrX 16911956 16912093 -149738203 + L1MB5 LINE L1 3728 3866 -2280 7 714 600 290 183 15 chrX 16912093 16912366 -149737930 + RCHARR1 DNA MER1_type 45 363 -611 7 714 1050 215 43 32 chrX 16912799 16913078 -149737218 + RCHARR1 DNA MER1_type 693 974 0 7 714 330 190 58 29 chrX 16913080 16913183 -149737113 + L1MB5 LINE L1 3874 3979 -2167 7 714 213 250 0 152 chrX 16913299 16913365 -149736931 + PB1 SINE Alu 70 125 -2 7 714 366 288 0 0 chrX 16913429 16913502 -149736794 - ID4_ SINE ID 0 83 11 7 714 535 312 0 31 chrX 16913539 16913668 -149736628 + RSINE1 SINE B4 3 127 -38 7 714 384 22 0 0 chrX 16913692 16913737 -149736559 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 714 189 0 0 0 chrX 16913743 16913764 -149736532 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 7 714 887 274 158 13 chrX 16913778 16914341 -149735955 + L1MB5 LINE L1 5320 5964 -210 7 714 817 126 0 8 chrX 16914376 16914504 -149735792 + Lx9 LINE L1 6898 7024 -620 7 714 995 143 11 28 chrX 16914502 16914682 -149735614 + Lx9 LINE L1 7280 7456 -188 7 714 252 59 0 0 chrX 16914682 16914716 -149735580 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 714 553 144 18 0 chrX 16914726 16914837 -149735459 + Lx9 LINE L1 7532 7644 0 7 714 648 261 13 6 chrX 16914864 16915022 -149735274 + RSINE1 SINE B4 4 162 -3 7 714 2025 246 38 22 chrX 16915195 16915698 -149734598 - Lx6 LINE L1 -5 7455 6945 7 714 12707 87 7 0 chrX 16915696 16918184 -149732112 + L1_Mus1 LINE L1 4061 6567 0 7 714 975 193 0 6 chrX 16918190 16918362 -149731934 - Lx7 LINE L1 -727 6969 6799 7 714 2154 191 60 2 chrX 16918352 16918767 -149731529 - L1_Mur3 LINE L1 -7 5873 5435 7 714 1982 122 10 3 chrX 16918767 16919070 -149731226 + RLTR10E LTR ERVK 1 305 -6 7 714 3929 144 164 44 chrX 16919084 16920013 -149730283 - L1_Mur3 LINE L1 -440 5440 4401 7 714 1421 135 131 7 chrX 16920010 16920293 -149730003 - L1_Mur3 LINE L1 -2149 3731 3414 7 714 2188 158 111 9 chrX 16920293 16920726 -149729570 - RMER6C LTR ERVK -213 477 1 7 714 684 148 79 135 chrX 16920726 16920861 -149729435 - L1_Mur3 LINE L1 -3748 2132 2019 7 714 327 25 0 0 chrX 16920861 16920901 -149729395 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 714 684 148 79 135 chrX 16920901 16921031 -149729265 - L1_Mur3 LINE L1 -3862 2018 1882 7 714 1363 164 23 20 chrX 16921015 16921033 -149729263 - L1_Mur3 LINE L1 -4361 1519 1507 7 714 1151 161 102 5 chrX 16921033 16921239 -149729057 - URR1A DNA MER1_type 0 226 1 7 714 4729 183 65 7 chrX 16921239 16922370 -149727926 - L1_Mur3 LINE L1 -4374 1506 298 7 714 1657 229 63 21 chrX 16922445 16922825 -149727471 - MTD LTR MaLR -12 407 12 7 714 316 270 23 149 chrX 16922867 16922913 -149727383 - MER3 DNA MER1_type -47 162 135 7 714 687 209 43 29 chrX 16922913 16923051 -149727245 + B1_Mur1 SINE Alu 3 142 -7 7 714 316 270 23 149 chrX 16923051 16923178 -149727118 - MER3 DNA MER1_type -75 134 11 7 714 38 0 0 0 chrX 16923247 16923285 -149727011 + AT_rich Low_complexity Low_complexity 1 38 0 7 714 329 248 57 50 chrX 16923353 16923493 -149726803 + L1MC5 LINE L1 7535 7675 -286 7 714 843 264 0 35 chrX 16923511 16923711 -149726585 - B3A SINE B2 -5 193 1 7 714 7966 59 10 1 chrX 16923832 16924992 -149725304 + L1_Mus1 LINE L1 5434 6654 0 7 714 427 218 39 135 chrX 16924999 16925094 -149725202 + L1MA8 LINE L1 5214 5303 -1009 7 714 1042 229 19 0 chrX 16925094 16925299 -149724997 + B3 SINE B2 2 210 -6 7 714 427 232 104 116 chrX 16925299 16925371 -149724925 + L1MA8 LINE L1 5304 5368 -944 7 714 201 74 0 0 chrX 16925371 16925398 -149724898 + (TATG)n Simple_repeat Simple_repeat 2 28 0 7 714 243 0 0 0 chrX 16925398 16925425 -149724871 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 714 427 232 104 116 chrX 16925425 16925619 -149724677 + L1MA8 LINE L1 5369 5575 -737 7 714 845 175 0 2 chrX 16925693 16925834 -149724462 - B1_Mur2 SINE Alu -8 141 10 7 714 353 293 27 92 chrX 16925840 16926024 -149724272 - L1M2 LINE L1 -514 5786 5615 7 714 978 260 70 23 chrX 16926118 16926516 -149723780 + L1MA8 LINE L1 5875 6291 0 7 714 322 266 25 0 chrX 16926520 16926599 -149723697 + ID4 SINE ID 2 82 -1 7 714 328 283 55 11 chrX 16927554 16927736 -149722560 + L1MC3 LINE L1 4318 4507 -1639 7 714 408 186 57 0 chrX 16928054 16928124 -149722172 - ID_B1 SINE B4 -7 217 144 7 714 312 350 0 33 chrX 16928067 16928188 -149722108 - B1F2 SINE Alu -27 122 6 7 714 1848 305 71 43 chrX 16928430 16928688 -149721608 + MER21B LTR ERV1 39 280 -583 7 714 265 280 13 26 chrX 16928688 16928765 -149721531 + ID4_ SINE ID 1 76 -7 7 714 1848 305 71 43 chrX 16928765 16929129 -149721167 + MER21B LTR ERV1 281 678 -185 7 714 305 214 29 0 chrX 16929167 16929237 -149721059 + MER21B LTR ERV1 772 843 -20 7 714 429 295 107 0 chrX 16929596 16929708 -149720588 - RSINE1 SINE B4 -32 133 10 7 714 273 275 66 0 chrX 16929737 16929828 -149720468 + MIRb SINE MIR 172 268 0 7 714 569 259 132 26 chrX 16929862 16930013 -149720283 + B3A SINE B2 1 167 -31 7 714 252 0 0 0 chrX 16930026 16930054 -149720242 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 714 228 239 110 27 chrX 16930090 16930163 -149720133 + ID SINE ID 2 80 -144 7 714 438 340 89 33 chrX 16930555 16930929 -149719367 + L1MEg LINE L1 866 1231 -4888 7 714 241 269 15 65 chrX 16931076 16931153 -149719143 + L1MC3 LINE L1 5526 5598 -2187 7 714 240 274 0 0 chrX 16931283 16931345 -149718951 + CT-rich Low_complexity Low_complexity 1 62 0 7 714 938 290 52 46 chrX 16931396 16931725 -149718571 - Lx6 LINE L1 -28 7432 7102 7 714 6364 190 22 28 chrX 16931734 16932020 -149718276 - L1_Mur3 LINE L1 -308 5569 5298 7 714 1210 35 0 0 chrX 16932020 16932163 -149718133 - B1_Mm SINE Alu 0 147 5 7 714 6364 190 22 28 chrX 16932163 16932833 -149717463 - L1_Mur3 LINE L1 -580 5297 4636 7 714 228 35 0 0 chrX 16932833 16932862 -149717434 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 714 6364 190 22 28 chrX 16932862 16933241 -149717055 - L1_Mur3 LINE L1 -1242 4635 4242 7 714 35586 73 3 5 chrX 16933232 16939387 -149710909 - L1Md_F3 LINE L1 -8 6576 441 7 714 7057 143 41 195 chrX 16939398 16941566 -149708730 - L1_Mur3 LINE L1 -1628 4249 2415 7 714 558 75 0 0 chrX 16941566 16941646 -149708650 + (TG)n Simple_repeat Simple_repeat 1 80 0 7 714 808 177 375 7 chrX 16941647 16941932 -149708364 - L1_Mur3 LINE L1 -3823 2057 1668 7 714 1337 163 58 10 chrX 16941905 16942338 -149707958 - L1_Mur3 LINE L1 -4430 1447 996 7 714 716 247 5 54 chrX 16942994 16943178 -149707118 - B3A SINE B2 0 198 24 7 714 589 269 79 18 chrX 16943180 16943460 -149706836 + L1MC3 LINE L1 5616 5912 -1873 7 714 371 360 9 17 chrX 16943627 16943743 -149706553 + PB1 SINE Alu 6 120 -7 7 714 315 71 0 0 chrX 16943747 16943789 -149706507 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 7 714 348 349 7 14 chrX 16943890 16944038 -149706258 + B1F1 SINE Alu 2 148 -1 7 714 491 164 196 18 chrX 16944066 16944178 -149706118 + B1_Mm SINE Alu 1 132 -15 7 714 8334 108 45 33 chrX 16944226 16945057 -149705239 - Lx2A1 LINE L1 0 7008 6151 7 714 1197 61 0 0 chrX 16945057 16945204 -149705092 - B1_Mus1 SINE Alu 0 148 2 7 714 8334 119 33 31 chrX 16945204 16946007 -149704289 - Lx2A1 LINE L1 -858 6150 5361 7 714 3561 127 3 3 chrX 16945998 16946599 -149703697 + L1_Mur2 LINE L1 3544 4144 -1733 7 714 231 65 65 0 chrX 16946620 16946666 -149703630 + (TA)n Simple_repeat Simple_repeat 2 50 0 7 714 897 226 316 28 chrX 16946772 16947352 -149702944 - RMER1B Other Other 0 1066 217 7 714 353 257 0 52 chrX 16947378 16947418 -149702878 - L1MA8 LINE L1 -167 6124 6090 7 714 2004 133 6 61 chrX 16947418 16947763 -149702533 - ORR1A3 LTR MaLR 0 326 1 7 714 353 257 0 52 chrX 16947763 16947837 -149702459 - L1MA8 LINE L1 -202 6089 6016 7 714 22 0 0 0 chrX 16947845 16947867 -149702429 + AT_rich Low_complexity Low_complexity 1 22 0 7 714 336 281 0 12 chrX 16948132 16948215 -149702081 + ID4_ SINE ID 2 83 0 7 714 16899 145 68 6 chrX 16948236 16952454 -149697842 + L1VL2 LINE L1 431 4916 -967 7 714 25 31 0 0 chrX 16952604 16952636 -149697660 + AT_rich Low_complexity Low_complexity 1 32 0 7 714 348 164 0 0 chrX 16952647 16952708 -149697588 + Lx5 LINE L1 5921 5981 -1069 7 714 246 62 0 0 chrX 16952745 16952777 -149697519 + (CAG)n Simple_repeat Simple_repeat 2 33 0 7 714 273 29 0 0 chrX 16953011 16953045 -149697251 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 7 714 439 284 17 1 chrX 16953114 16953250 -149697046 + B1F SINE Alu 7 149 0 7 714 273 119 0 0 chrX 16953281 16953323 -149696973 + (GGGA)n Simple_repeat Simple_repeat 4 45 0 7 714 840 20 0 0 chrX 16953331 16953429 -149696867 + (GGAGA)n Simple_repeat Simple_repeat 5 102 0 7 714 3438 209 55 43 chrX 16953467 16954209 -149696087 - RMER13A LTR ERVK -18 842 92 7 714 383 82 44 56 chrX 16954211 16954301 -149695995 + G-rich Low_complexity Low_complexity 4 92 0 7 714 1010 32 0 0 chrX 16954359 16954483 -149695813 - B1_Mm SINE Alu 0 147 24 7 714 207 0 0 0 chrX 16954483 16954506 -149695790 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 714 432 287 51 25 chrX 16954520 16954638 -149695658 - B1F SINE Alu -28 121 1 7 714 931 258 74 101 chrX 16956207 16956242 -149694054 + RMER13A LTR ERVK 1 28 -832 7 714 1612 209 167 63 chrX 16956242 16956752 -149693544 - RMER2 LTR ERV1 -4 563 1 7 714 931 273 82 100 chrX 16956752 16957269 -149693027 + RMER13A LTR ERVK 29 576 -51 7 714 290 297 59 10 chrX 16957506 16957608 -149692688 + MIR SINE MIR 13 119 -143 7 714 319 248 0 95 chrX 16957623 16957686 -149692610 - ORR1E LTR MaLR 0 379 307 7 714 6386 94 62 8 chrX 16957686 16958618 -149691678 + RLTR13C1 LTR ERVK 1 983 0 7 714 319 283 85 135 chrX 16958618 16958859 -149691437 - ORR1E LTR MaLR -53 306 77 7 714 315 206 176 0 chrX 16958941 16959009 -149691287 - ORR1E LTR MaLR -298 81 2 7 714 1992 212 72 138 chrX 16959231 16959883 -149690413 + RMER19C LTR ERVK 1 609 -2 7 714 29094 40 0 0 chrX 16960419 16964907 -149685389 - L1Md_Gf LINE L1 -852 5034 450 7 714 545 222 7 0 chrX 16964994 16965129 -149685167 + CT-rich Low_complexity Low_complexity 1 136 0 7 714 1918 169 58 6 chrX 16965312 16965657 -149684639 + MTB_Mm LTR MaLR 1 363 -44 7 714 897 93 43 0 chrX 16965664 16965803 -149684493 - L1_Mus4 LINE L1 -10 6626 6482 7 714 1265 92 54 0 chrX 16965834 16966019 -149684277 - B2_Mm2 SINE B2 0 195 1 7 714 243 182 0 22 chrX 16966023 16966068 -149684228 + MTB_Mm LTR MaLR 368 411 -8 7 714 2688 75 64 3 chrX 16967344 16967721 -149682575 + MTB LTR MaLR 1 400 0 7 714 1622 73 13 4 chrX 16968442 16968675 -149681621 + L1_Mus3 LINE L1 6398 6632 -6 8 714 378 139 51 0 chrX 16968676 16968755 -149681541 + L1_Mur2 LINE L1 5280 5362 -515 8 714 5963 78 21 15 chrX 16968759 16969578 -149680718 + L1_Mus3 LINE L1 5813 6636 -2 8 714 219 200 0 20 chrX 16969724 16969775 -149680521 + B4A SINE B4 3 52 -240 8 714 21 0 0 0 chrX 16969865 16969886 -149680410 + AT_rich Low_complexity Low_complexity 1 21 0 8 714 22 35 0 0 chrX 16969924 16969953 -149680343 + AT_rich Low_complexity Low_complexity 1 29 0 8 714 28 29 0 0 chrX 16970009 16970044 -149680252 + AT_rich Low_complexity Low_complexity 1 35 0 8 714 1718 153 125 3 chrX 16970144 16970471 -149679825 + ORR1B2 LTR MaLR 1 367 0 8 714 258 266 32 0 chrX 16970486 16970564 -149679732 - B4A SINE B4 -60 164 82 8 714 1148 217 144 53 chrX 16970656 16971144 -149679152 - RMER4B LTR ERVK -14 452 1 8 714 236 261 0 42 chrX 16971492 16971564 -149678732 + ID4_ SINE ID 5 73 -10 8 714 1103 33 13 13 chrX 16971580 16971734 -149678562 + (GGAGA)n Simple_repeat Simple_repeat 2 155 0 8 714 311 323 77 23 chrX 16971944 16972074 -149678222 - L2a LINE L2 -4 3422 3286 8 714 516 236 42 27 chrX 16972261 16972388 -149677908 - B1_Mur3 SINE Alu 0 120 4 8 714 861 19 0 0 chrX 16972398 16972501 -149677795 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 8 714 452 237 20 80 chrX 16972501 16972652 -149677644 - L1M3 LINE L1 -580 5591 5450 8 714 400 282 50 28 chrX 16972659 16972841 -149677455 - L1ME2z LINE L1 -172 6272 6087 8 714 423 0 0 0 chrX 16973789 16973836 -149676460 + (TTTA)n Simple_repeat Simple_repeat 1 47 0 8 714 958 242 15 25 chrX 16973837 16974036 -149676260 - B3 SINE B2 -19 197 1 8 714 258 299 37 84 chrX 16974284 16974338 -149675958 - L1ME2z LINE L1 -363 6081 6037 8 714 335 274 0 0 chrX 16974338 16974411 -149675885 - ID4_ SINE ID -10 73 1 8 714 258 299 37 84 chrX 16974411 16974546 -149675750 - L1ME2z LINE L1 -408 6036 5901 8 714 351 296 0 0 chrX 16974639 16974720 -149675576 + ID4 SINE ID 1 81 -2 8 714 554 132 18 54 chrX 16974763 16974875 -149675421 + PB1D9 SINE Alu 1 108 -12 8 714 3169 46 2 22 chrX 16974875 16975277 -149675019 + L1_Mus1 LINE L1 6172 6565 -2 8 714 297 200 0 0 chrX 16975750 16975805 -149674491 + ID4 SINE ID 6 60 -23 8 714 1152 75 0 0 chrX 16975846 16975992 -149674304 - B1_Mus2 SINE Alu 0 147 2 8 714 275 248 93 8 chrX 16976035 16976153 -149674143 + MIR SINE MIR 135 262 0 8 714 362 250 76 0 chrX 16976183 16976275 -149674021 + PB1D10 SINE Alu 4 102 -15 8 714 4093 63 86 0 chrX 16976388 16976926 -149673370 + Lx3_Mus LINE L1 6411 6994 -15 8 714 252 276 0 116 chrX 16977298 16977384 -149672912 - ID4 SINE ID -3 80 5 8 714 216 0 0 0 chrX 16978795 16978819 -149671477 + (A)n Simple_repeat Simple_repeat 1 24 0 8 714 274 311 0 39 chrX 16978855 16978932 -149671364 + LTR16C LTR ERVL 186 259 -230 8 714 2009 244 92 49 chrX 16978975 16979623 -149670673 + MTD-int LTR MaLR 494 1254 -4 8 714 1140 236 36 17 chrX 16979627 16979949 -149670347 + MTD LTR MaLR 1 417 -2 8 714 197 333 0 0 chrX 16980008 16980071 -149670225 + MIRc SINE MIR 81 143 -125 8 714 481 204 304 58 chrX 16980143 16980383 -149669913 - MT2C_Mm LTR ERVL -175 300 2 8 714 368 302 19 0 chrX 16980544 16980650 -149669646 + PB1D10 SINE Alu 1 108 -9 8 714 198 0 0 0 chrX 16980666 16980688 -149669608 + (GGA)n Simple_repeat Simple_repeat 3 24 0 8 714 208 270 0 16 chrX 16980827 16980874 -149669422 + polypyrimidine Low_complexity Low_complexity 17 63 0 8 714 297 0 0 0 chrX 16980874 16980907 -149669389 + (TCTG)n Simple_repeat Simple_repeat 4 36 0 8 714 208 270 0 16 chrX 16980907 16980923 -149669373 + polypyrimidine Low_complexity Low_complexity 2 16 0 8 714 301 365 0 70 chrX 16980925 16981040 -149669256 - B1F1 SINE Alu 0 149 43 8 714 236 346 0 36 chrX 16981528 16981612 -149668684 - ID4_ SINE ID -2 81 1 8 714 324 0 0 0 chrX 16981960 16981996 -149668300 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 714 693 270 97 48 chrX 16982004 16982210 -149668086 - B3 SINE B2 0 216 1 8 714 399 269 115 0 chrX 16982220 16982324 -149667972 - PB1D7 SINE Alu -4 116 1 8 714 271 197 0 0 chrX 16982603 16982664 -149667632 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 714 513 205 0 0 chrX 16982665 16982782 -149667514 + GA-rich Low_complexity Low_complexity 1 117 0 8 714 744 225 129 10 chrX 16983228 16983421 -149666875 + B3 SINE B2 1 216 0 8 714 324 352 19 0 chrX 16983427 16983535 -149666761 + PB1D10 SINE Alu 3 112 -5 8 714 225 324 0 13 chrX 16983536 16983611 -149666685 + GA-rich Low_complexity Low_complexity 2 75 0 8 714 231 88 0 0 chrX 16983651 16983685 -149666611 + (GA)n Simple_repeat Simple_repeat 2 35 0 8 714 843 194 80 20 chrX 16983925 16984125 -149666171 + Lx5 LINE L1 6831 7042 -8 8 714 230 219 55 0 chrX 16984146 16984219 -149666077 + L1ME3A LINE L1 5878 5954 -219 8 714 646 155 45 25 chrX 16984233 16984394 -149665902 + L1Md_F2 LINE L1 394 528 -6110 8 714 1893 100 15 53 chrX 16984380 16984906 -149665390 + L1Md_F2 LINE L1 958 1453 -4430 8 714 23346 77 1 2 chrX 16984905 16988210 -149662086 + L1Md_F2 LINE L1 2284 5586 -297 8 714 7494 73 11 2 chrX 16988210 16989196 -149661100 + L1Md_F2 LINE L1 5587 6581 -1 8 714 237 229 29 0 chrX 16989277 16989347 -149660949 + L1ME2 LINE L1 6077 6148 -16 8 714 461 267 8 8 chrX 16989619 16989736 -149660560 + PB1D7 SINE Alu 1 117 -3 8 714 991 263 28 23 chrX 16990451 16990669 -149659627 - ID_B1 SINE B4 0 224 6 8 714 222 171 0 0 chrX 16990796 16990837 -149659459 + CT-rich Low_complexity Low_complexity 3 43 0 8 714 451 274 57 0 chrX 16990892 16991016 -149659280 + B1F SINE Alu 3 133 -16 8 714 232 239 155 0 chrX 16991105 16991176 -149659120 - BC1_Mm scRNA scRNA -69 83 2 8 714 688 266 29 1 chrX 16991384 16991571 -149658725 - B3A SINE B2 -6 210 15 8 714 288 0 0 0 chrX 16992757 16992789 -149657507 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 8 714 363 287 11 0 chrX 16993378 16993465 -149656831 - PB1D10 SINE Alu -6 111 24 8 714 943 303 98 15 chrX 16993618 16993953 -149656343 + MLT1A0 LTR MaLR 1 363 -2 8 714 236 292 22 0 chrX 16993954 16994043 -149656253 - MER97c DNA MER1_type? -379 711 621 8 714 237 279 0 0 chrX 16994451 16994508 -149655788 + B1F SINE Alu 91 147 -2 8 714 371 272 44 7 chrX 16994641 16994776 -149655520 - MER97c DNA MER1_type? -757 333 194 8 714 470 292 119 0 chrX 16994776 16994944 -149655352 + MER33 DNA MER1_type 4 191 -133 8 714 1081 88 0 19 chrX 16995359 16995521 -149654775 + L1_Mus2 LINE L1 6406 6564 -2 8 714 7076 65 29 5 chrX 16995537 16996800 -149653496 - L1Md_F2 LINE L1 -14 6568 5288 8 714 21112 11 0 0 chrX 16996794 17000000 -149650296 - L1Md_A LINE L1 -3 6579 3375 8 714 17712 16 2 12 chrX 17000000 17003168 -149647128 - L1Md_A LINE L1 -2509 3374 244 1 714 7412 73 3 1 chrX 17003162 17004207 -149646089 - L1_Mm LINE L1 -582 5301 4255 2 714 273 319 0 65 chrX 17004209 17004286 -149646010 - B4A SINE B4 -126 166 95 3 714 848 247 20 5 chrX 17004325 17004524 -149645772 + B3 SINE B2 2 203 -13 4 714 367 297 101 8 chrX 17004672 17004801 -149645495 - B1F SINE Alu -8 141 1 5 714 1030 249 56 63 chrX 17004819 17004859 -149645437 + L1M4 LINE L1 4730 4768 -1378 6 714 462 18 0 0 chrX 17004859 17004914 -149645382 + (CA)n Simple_repeat Simple_repeat 1 55 0 7 714 1030 249 56 63 chrX 17004914 17005014 -149645282 + L1M4 LINE L1 4769 4853 -1293 6 714 280 310 0 0 chrX 17005014 17005085 -149645211 - ID4 SINE ID -11 72 2 8 714 1030 249 56 63 chrX 17005085 17005405 -149644891 + L1M4 LINE L1 4854 5188 -958 6 714 288 378 0 22 chrX 17005405 17005497 -149644799 + B1F1 SINE Alu 3 92 -57 9 714 191 61 0 29 chrX 17005734 17005768 -149644528 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1 714 233 193 17 17 chrX 17006022 17006080 -149644216 + GA-rich Low_complexity Low_complexity 3 60 0 1 714 536 40 13 0 chrX 17006120 17006195 -149644101 + (GA)n Simple_repeat Simple_repeat 2 77 0 1 714 910 169 14 0 chrX 17006295 17006443 -149643853 - B1_Mur4 SINE Alu 0 150 1 1 714 451 246 184 21 chrX 17006495 17006636 -149643660 - RSINE1 SINE B4 0 165 2 1 714 1179 284 41 39 chrX 17006643 17007155 -149643141 + L1M4 LINE L1 5310 5822 -356 6 714 325 265 47 38 chrX 17007160 17007266 -149643030 + MTE2a LTR MaLR 272 378 -1 1 714 1806 220 16 32 chrX 17007330 17007701 -149642595 - ORR1D2 LTR MaLR 0 370 6 1 714 943 54 131 0 chrX 17007822 17007952 -149642344 + B1_Mm SINE Alu 1 147 0 1 714 261 0 0 0 chrX 17007952 17007981 -149642315 + (A)n Simple_repeat Simple_repeat 1 29 0 1 714 268 218 129 52 chrX 17008018 17008173 -149642123 + L1MDa LINE L1 1202 1368 -5265 1 714 768 271 0 54 chrX 17008597 17008819 -149641477 + B3 SINE B2 3 212 -4 2 714 34 24 0 0 chrX 17008829 17008870 -149641426 + AT_rich Low_complexity Low_complexity 1 41 0 2 714 854 275 46 89 chrX 17008937 17009240 -149641056 + B4A SINE B4 3 292 0 2 714 2495 78 3 3 chrX 17009734 17010067 -149640229 - L1_Mus2 LINE L1 0 6566 6234 2 714 370 216 138 44 chrX 17010393 17010596 -149639700 + L1MDa LINE L1 3251 3472 -3065 1 714 228 288 24 36 chrX 17010601 17010684 -149639612 + ID4 SINE ID 2 83 0 2 714 21 0 0 0 chrX 17010778 17010799 -149639497 + AT_rich Low_complexity Low_complexity 1 21 0 2 714 1101 231 116 16 chrX 17010799 17011230 -149639066 + L1MDa LINE L1 3477 3950 -2587 1 714 3099 68 27 0 chrX 17011319 17011729 -149638567 + BGLII LTR ERVK 1 421 0 2 714 247 381 0 0 chrX 17011747 17011831 -149638465 - BC1_Mm scRNA scRNA -68 84 1 2 714 25 0 0 0 chrX 17011833 17011858 -149638438 + AT_rich Low_complexity Low_complexity 1 25 0 2 714 672 276 13 0 chrX 17011860 17012016 -149638280 - RSINE1 SINE B4 -6 159 2 2 714 1232 220 211 96 chrX 17013123 17013601 -149636695 + MT2A LTR ERVL 1 533 0 3 714 317 323 30 24 chrX 17015161 17015326 -149634970 + L1MD2 LINE L1 5962 6127 -232 3 714 848 173 25 13 chrX 17015376 17015534 -149634762 + ORR1B1 LTR MaLR 2 161 -233 3 714 7186 97 22 1 chrX 17015563 17017334 -149632962 - L1_Mus1 LINE L1 -2 6565 4759 3 714 260 267 130 26 chrX 17017554 17017631 -149632665 - ID SINE ID -138 86 2 3 714 559 228 40 24 chrX 17017965 17018091 -149632205 - ID_B1 SINE B4 -3 221 94 3 714 1240 178 33 12 chrX 17018395 17018639 -149631657 - ORR1B1 LTR MaLR -2 392 144 3 714 277 252 54 109 chrX 17018654 17018801 -149631495 + L1VL1 LINE L1 237 375 -6047 3 714 266 302 17 0 chrX 17018940 17019056 -149631240 + L1Md_F2 LINE L1 675 792 -5824 3 714 1819 185 80 41 chrX 17019066 17019254 -149631042 + L1Md_F2 LINE L1 725 949 -5667 3 714 1110 69 7 0 chrX 17019254 17019398 -149630898 + B1_Mm SINE Alu 3 147 0 3 714 228 35 0 0 chrX 17019406 17019435 -149630861 + (CAAAC)n Simple_repeat Simple_repeat 1 29 0 4 714 27980 107 8 17 chrX 17019435 17024152 -149626144 + L1Md_F2 LINE L1 950 5586 -297 3 714 8115 44 0 0 chrX 17024153 17025136 -149625160 + L1Md_F2 LINE L1 5588 6570 -12 3 714 14894 87 8 47 chrX 17025152 17025866 -149624430 + L1_Mm LINE L1 2146 2873 -3010 4 714 3292 36 0 0 chrX 17025866 17026257 -149624039 + L1Md_T LINE L1 6192 6582 0 4 714 288 303 0 15 chrX 17026258 17026325 -149623971 + B4A SINE B4 223 288 -4 4 714 14894 116 33 43 chrX 17026325 17028826 -149621470 + L1_Mm LINE L1 2869 5579 -298 4 714 7380 70 16 5 chrX 17028827 17029810 -149620486 + L1Md_F2 LINE L1 5587 6580 -2 4 714 480 355 202 36 chrX 17030227 17030618 -149619678 - MLT1H1 LTR MaLR -60 495 40 4 714 367 218 81 98 chrX 17030645 17030818 -149619478 + RLTR15 LTR ERVK 1 170 -189 4 714 287 346 39 0 chrX 17031877 17031981 -149618315 + L2 LINE L2 2680 2787 -632 4 714 584 254 90 6 chrX 17032956 17033134 -149617162 - B3A SINE B2 -5 193 1 4 714 227 152 233 17 chrX 17033180 17033240 -149617056 - ID4_ SINE ID -9 74 2 4 714 1254 325 63 5 chrX 17033470 17033896 -149616400 + LTR16A LTR ERVL 1 451 0 5 714 450 0 0 0 chrX 17033939 17033989 -149616307 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 714 447 19 0 0 chrX 17033989 17034040 -149616256 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 714 1096 63 28 0 chrX 17034360 17034503 -149615793 + B1_Mm SINE Alu 1 147 0 5 714 183 146 0 0 chrX 17034504 17034545 -149615751 + (A)n Simple_repeat Simple_repeat 1 41 0 5 714 456 19 0 0 chrX 17034604 17034657 -149615639 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 714 189 0 0 0 chrX 17034695 17034716 -149615580 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 714 716 304 111 16 chrX 17034727 17034971 -149615325 - B4A SINE B4 -18 274 8 5 714 488 277 65 59 chrX 17035021 17035190 -149615106 - LTR16A LTR ERVL -264 187 18 5 714 558 200 24 48 chrX 17035488 17035614 -149614682 + B1F2 SINE Alu 1 123 -26 5 714 966 244 5 27 chrX 17036218 17036437 -149613859 + B3 SINE B2 1 214 -2 6 714 2534 194 129 35 chrX 17036694 17037315 -149612981 - RMER1B Other Other -9 1057 379 6 714 242 304 87 0 chrX 17037994 17038063 -149612233 + ID4_ SINE ID 4 78 -5 6 714 1131 189 252 142 chrX 17038116 17038596 -149611700 + MT2A LTR ERVL 1 533 0 6 714 306 231 25 13 chrX 17038735 17038814 -149611482 - ID4 SINE ID -2 81 2 6 89 1495 229 112 46 chrX 17038881 17039379 -149610917 + MT2A LTR ERVL 1 531 -2 6 715 243 335 201 11 chrX 17039955 17040139 -149610157 - MLT1K LTR MaLR -376 219 1 6 715 695 213 103 62 chrX 17040630 17040825 -149609471 - MTD LTR MaLR -21 398 196 6 715 543 31 0 0 chrX 17040827 17040892 -149609404 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 6 715 552 100 0 0 chrX 17040882 17040962 -149609334 + (TC)n Simple_repeat Simple_repeat 2 81 0 6 715 361 189 28 56 chrX 17040976 17041105 -149609191 - B1_Mus2 SINE Alu 0 149 25 7 715 668 240 78 6 chrX 17041071 17041251 -149609045 - MTD LTR MaLR -226 193 1 6 715 276 30 0 0 chrX 17041910 17041943 -149608353 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 715 259 357 87 0 chrX 17041959 17042085 -149608211 - MLT1C LTR MaLR -110 395 259 7 715 425 184 126 104 chrX 17042111 17042138 -149608158 - B2_Mm2 SINE B2 -4 191 163 7 715 327 49 0 0 chrX 17042138 17042179 -149608117 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 715 514 184 126 104 chrX 17042179 17042333 -149607963 - B3A SINE B2 -33 162 6 7 715 349 260 125 29 chrX 17042293 17042499 -149607797 - MLT1C LTR MaLR -244 261 30 7 715 340 290 67 3 chrX 17042601 17042709 -149607587 - PB1 SINE Alu -12 115 1 7 715 1046 286 44 26 chrX 17042871 17043003 -149607293 + MLT1A0 LTR MaLR 19 145 -220 7 715 252 0 0 0 chrX 17043003 17043031 -149607265 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 7 715 1046 286 44 26 chrX 17043031 17043239 -149607057 + MLT1A0 LTR MaLR 146 364 -1 7 715 1648 179 179 3 chrX 17043975 17044333 -149605963 - MTC LTR MaLR 0 421 1 7 715 709 202 17 11 chrX 17044333 17044508 -149605788 - MTC-int LTR MaLR 0 1258 1083 7 715 1377 180 30 49 chrX 17044856 17045456 -149604840 + L1_Mur3 LINE L1 953 1531 -4349 7 715 12236 80 5 2 chrX 17045452 17047318 -149602978 + L1_Mus2 LINE L1 4109 5981 -585 8 715 334 132 108 0 chrX 17047322 17047405 -149602891 + L1Md_F2 LINE L1 6479 6570 -12 8 715 1033 297 30 28 chrX 17047377 17047845 -149602451 + L1_Rod LINE L1 3874 4342 -1505 8 715 319 235 26 0 chrX 17047979 17048094 -149602202 + L1M2 LINE L1 4562 4679 -1464 8 715 7072 93 8 10 chrX 17048192 17049541 -149600755 - L1VL4 LINE L1 -1586 1973 623 8 715 4401 18 0 0 chrX 17049541 17050034 -149600262 + MT2_Mm LTR ERVL 1 493 0 8 715 5046 90 12 18 chrX 17050034 17050387 -149599909 - L1VL4 LINE L1 -5680 622 277 8 715 1394 143 22 118 chrX 17050387 17050743 -149599553 + RLTRETN_Mm LTR ERVK 1 322 0 8 715 5046 90 12 18 chrX 17050743 17050795 -149599501 - L1VL4 LINE L1 -6026 276 224 8 715 2792 66 20 26 chrX 17050804 17051194 -149599102 + RLTR10 LTR ERVK 1 388 -2 8 715 2096 165 79 25 chrX 17051212 17051604 -149598692 - MTC LTR MaLR -8 413 1 8 715 279 150 0 0 chrX 17052206 17052266 -149598030 + (TTC)n Simple_repeat Simple_repeat 2 61 0 8 715 489 34 0 0 chrX 17052269 17052328 -149597968 + (TCC)n Simple_repeat Simple_repeat 3 61 0 9 715 246 314 9 71 chrX 17052334 17052447 -149597849 + RMER20B LTR ERVK 484 589 -38 9 715 209 100 0 91 chrX 17052730 17052753 -149597543 + (GTTTG)n Simple_repeat Simple_repeat 1 23 0 9 715 3269 21 39 0 chrX 17052753 17053134 -149597162 + MTA_Mm LTR MaLR 1 396 0 9 715 9160 33 3 2 chrX 17053134 17054229 -149596067 + MTA_Mm-int LTR MaLR 1 1096 -2 9 715 3236 21 39 3 chrX 17054231 17054613 -149595683 + MTA_Mm LTR MaLR 1 396 0 9 715 209 100 0 91 chrX 17054613 17054640 -149595656 + (GTTTG)n Simple_repeat Simple_repeat 5 30 0 9 715 239 229 206 10 chrX 17054646 17054743 -149595553 - PB1D10 SINE Alu 0 117 2 9 715 426 254 22 10 chrX 17055297 17055411 -149594885 + PB1D10 SINE Alu 1 114 -3 9 715 487 289 89 77 chrX 17055759 17055928 -149594368 - MER2B DNA MER2_type 0 336 166 9 715 431 237 0 0 chrX 17055928 17056004 -149594292 + B3A SINE B2 1 76 -122 9 715 1418 267 56 53 chrX 17056125 17056537 -149593759 + Lx5 LINE L1 6618 7030 -20 9 715 838 84 15 15 chrX 17056537 17056670 -149593626 + (GAAA)n Simple_repeat Simple_repeat 4 136 0 1 715 1878 160 2 107 chrX 17056753 17056976 -149593320 - RMER17C LTR ERVK 0 410 191 1 715 587 14 0 14 chrX 17056976 17057049 -149593247 + (GGAGA)n Simple_repeat Simple_repeat 2 73 0 1 715 1878 170 8 97 chrX 17057049 17057307 -149592989 - RMER17C LTR ERVK -540 418 17 1 715 290 347 0 0 chrX 17057403 17057478 -149592818 - MER2B DNA MER2_type -261 75 1 9 715 224 228 17 17 chrX 17058583 17058641 -149591655 + CT-rich Low_complexity Low_complexity 4 61 0 1 715 715 244 124 30 chrX 17058903 17059308 -149590988 + Lx7 LINE L1 7180 7696 0 1 715 1804 136 75 0 chrX 17059326 17059620 -149590676 - MTC LTR MaLR 0 421 106 1 715 3748 126 21 45 chrX 17059620 17060242 -149590054 - Lx4A LINE L1 -669 6389 5783 1 715 5529 82 3 1 chrX 17060272 17060958 -149589338 - L1_Mus2 LINE L1 -2 6564 5878 1 715 344 202 11 0 chrX 17060992 17061081 -149589215 - L1_Rod LINE L1 -1960 3887 3798 1 715 473 217 147 0 chrX 17061261 17061390 -149588906 + MLT1E3 LTR MaLR 4 151 -473 1 715 286 340 48 48 chrX 17061382 17061425 -149588871 + MLT1E3 LTR MaLR 395 438 -186 1 715 1417 102 0 5 chrX 17061425 17061612 -149588684 - B2_Mm2 SINE B2 -9 186 1 1 715 286 340 48 48 chrX 17061612 17061775 -149588521 + MLT1E3 LTR MaLR 439 601 -23 1 715 332 373 39 23 chrX 17061800 17062058 -149588238 + L1M5 LINE L1 4992 5253 -893 1 715 703 126 8 8 chrX 17062069 17062197 -149588099 + (TC)n Simple_repeat Simple_repeat 2 129 0 1 715 288 0 0 0 chrX 17062197 17062229 -149588067 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 715 274 344 36 27 chrX 17062381 17062602 -149587694 + L1M5 LINE L1 5469 5691 -549 1 715 478 267 85 25 chrX 17062926 17063126 -149587170 - RLTR42-int LTR ERVK -4147 1375 1164 1 715 1005 238 19 0 chrX 17063604 17063810 -149586486 - B3 SINE B2 -3 213 4 1 715 537 110 0 0 chrX 17063833 17063915 -149586381 + (TG)n Simple_repeat Simple_repeat 2 83 0 1 715 255 240 0 138 chrX 17063963 17064050 -149586246 - RSINE1 SINE B4 -68 97 23 1 715 2487 98 0 58 chrX 17064177 17064523 -149585773 - ORR1A3 LTR MaLR 0 326 1 1 715 1233 243 129 3 chrX 17064824 17065142 -149585154 + MTEa LTR MaLR 1 358 -21 1 715 3247 204 116 31 chrX 17065611 17066028 -149584268 - Lx7 LINE L1 -51 7645 7172 1 715 3201 134 48 4 chrX 17066028 17066506 -149583790 - RLTR19 LTR ERVK 0 499 1 1 715 3247 204 116 31 chrX 17066506 17066866 -149583430 - Lx7 LINE L1 -525 7171 6802 1 715 1110 171 26 10 chrX 17066882 17067077 -149583219 + ORR1D1 LTR MaLR 34 231 -143 1 715 1528 224 110 5 chrX 17067996 17068371 -149581925 + MTD LTR MaLR 1 405 -14 1 715 729 301 52 28 chrX 17068432 17068644 -149581652 + ID_B1 SINE B4 1 217 -7 1 715 241 197 48 16 chrX 17069009 17069071 -149581225 - L1MA7 LINE L1 -68 6223 6160 1 715 255 61 0 0 chrX 17069589 17069622 -149580674 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 715 611 191 86 9 chrX 17069624 17069740 -149580556 - B1_Mur4 SINE Alu -17 133 9 1 715 331 294 75 60 chrX 17069740 17069758 -149580538 - ID_B1 SINE B4 -17 207 72 1 715 256 271 88 61 chrX 17070430 17070544 -149579752 - PB1D10 SINE Alu 0 117 1 1 715 31 26 0 0 chrX 17071037 17071075 -149579221 + AT_rich Low_complexity Low_complexity 1 38 0 1 715 4270 67 2 13 chrX 17071145 17071672 -149578624 - L1_Mus1 LINE L1 -2 6565 6045 1 715 681 200 25 0 chrX 17071738 17071858 -149578438 + RSINE1 SINE B4 12 134 -31 1 715 381 58 0 0 chrX 17071863 17071915 -149578381 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 715 2741 108 63 63 chrX 17072843 17073318 -149576978 - IAPLTR2_Mm LTR ERVK 0 475 1 1 715 27199 10 2 0 chrX 17073318 17076270 -149574026 - IAPEz-int LTR ERVK 0 6481 3525 1 715 953 80 24 0 chrX 17076270 17076395 -149573901 - IAPEz-int LTR ERVK -2770 4910 4783 1 715 1883 107 4 4 chrX 17076390 17076652 -149573644 - IAPEz-int LTR ERVK -5183 2497 2236 1 715 446 66 0 32 chrX 17076641 17076704 -149573592 - IAPEz-int LTR ERVK -5062 1419 1359 1 715 5261 51 9 16 chrX 17076704 17077377 -149572919 - IAPEz-int LTR ERVK -5819 662 3 1 715 2751 103 63 63 chrX 17077379 17077854 -149572442 - IAPLTR2_Mm LTR ERVK 0 475 1 1 715 27199 10 2 0 chrX 17077854 17080806 -149569490 - IAPEz-int LTR ERVK 0 6481 3525 1 715 953 80 24 0 chrX 17080806 17080931 -149569365 - IAPEz-int LTR ERVK -2770 4910 4783 1 715 1883 107 4 4 chrX 17080926 17081188 -149569108 - IAPEz-int LTR ERVK -5183 2497 2236 1 715 446 66 0 32 chrX 17081177 17081240 -149569056 - IAPEz-int LTR ERVK -5062 1419 1359 1 715 5261 51 9 16 chrX 17081240 17081913 -149568383 - IAPEz-int LTR ERVK -5819 662 3 1 715 2751 103 63 63 chrX 17081915 17082390 -149567906 - IAPLTR2_Mm LTR ERVK 0 475 1 1 715 448 316 99 59 chrX 17082863 17083085 -149567211 - LTR40b LTR ERVL -102 360 130 1 715 868 210 38 43 chrX 17083634 17083843 -149566453 + ORR1D1 LTR MaLR 167 374 0 1 715 354 213 10 31 chrX 17083847 17083944 -149566352 + MTE2a LTR MaLR 285 379 0 1 715 588 286 16 6 chrX 17083968 17084151 -149566145 + MER2 DNA MER2_type 87 271 -74 1 715 370 284 0 0 chrX 17084191 17084272 -149566024 - ID4_ SINE ID 0 83 3 1 715 3105 140 10 11 chrX 17084317 17084838 -149565458 - RLTR28 LTR ERVL -2 522 3 1 715 3006 180 21 23 chrX 17084864 17085394 -149564902 - RMER15 LTR ERVL 0 575 47 1 715 281 122 20 0 chrX 17085390 17085439 -149564857 + MTD LTR MaLR 356 405 -14 1 715 225 171 0 0 chrX 17085543 17085578 -149564718 + URR1B DNA MER1_type 2 36 -189 1 715 360 167 0 134 chrX 17085592 17085671 -149564625 + URR1B DNA MER1_type 141 210 -15 1 715 1847 101 273 3 chrX 17085671 17085960 -149564336 + ORR1B2 LTR MaLR 1 367 0 1 715 360 167 0 134 chrX 17085960 17085977 -149564319 + URR1B DNA MER1_type 211 224 -1 1 715 482 302 85 37 chrX 17085984 17086173 -149564123 - MER58A DNA MER1_type -25 199 2 1 715 329 272 32 73 chrX 17086254 17086377 -149563919 + PB1D9 SINE Alu 2 119 -1 1 715 360 268 30 20 chrX 17086431 17086530 -149563766 + PB1D10 SINE Alu 2 101 -16 1 715 238 226 32 0 chrX 17086853 17086915 -149563381 - L3b LINE CR1 -208 274 211 1 715 773 252 107 15 chrX 17087181 17087378 -149562918 + ID_B1 SINE B4 2 216 -8 1 715 306 270 216 0 chrX 17087534 17087645 -149562651 + Arthur1 DNA Tip100 1 135 -3812 1 715 498 200 104 0 chrX 17087700 17087815 -149562481 - B1_Mur3 SINE Alu -21 128 2 1 715 269 286 17 188 chrX 17087815 17087920 -149562376 - ID SINE ID -143 81 8 1 715 312 27 0 0 chrX 17088152 17088189 -149562107 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 715 873 238 72 14 chrX 17088734 17088943 -149561353 - ID_B1 SINE B4 -2 222 2 1 715 270 333 67 33 chrX 17089044 17089224 -149561072 - MIRb SINE MIR -23 245 60 1 715 252 320 48 0 chrX 17089564 17089667 -149560629 + L1MA10 LINE L1 6227 6334 0 1 715 625 252 28 21 chrX 17089933 17090075 -149560221 + RSINE1 SINE B4 4 146 -19 1 715 513 44 0 0 chrX 17090398 17090466 -149559830 + (GA)n Simple_repeat Simple_repeat 2 69 0 1 715 735 95 0 0 chrX 17090819 17090924 -149559372 + (CGTG)n Simple_repeat Simple_repeat 1 105 0 1 715 195 42 0 0 chrX 17091482 17091506 -149558790 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 715 302 265 0 14 chrX 17091509 17091578 -149558718 - ID4 SINE ID -10 73 6 1 715 970 205 7 0 chrX 17091967 17092118 -149558178 - RSINE1 SINE B4 -13 152 1 1 715 541 220 178 67 chrX 17092154 17092334 -149557962 - MER20 DNA MER1_type -19 200 1 1 715 335 241 0 0 chrX 17092592 17092671 -149557625 + L1ME2z LINE L1 6362 6440 -4 1 715 183 365 95 0 chrX 17092888 17092962 -149557334 - MIR3 SINE MIR -20 188 108 1 715 515 307 58 17 chrX 17093375 17093670 -149556626 + L1M5 LINE L1 5371 5677 -502 1 715 1239 213 34 60 chrX 17093853 17094180 -149556116 - RMER17C LTR ERVK 0 410 89 1 715 2812 70 53 0 chrX 17094180 17094521 -149555775 + RLTR10D LTR ERVK 1 359 0 1 715 1239 213 34 60 chrX 17094521 17094542 -149555754 - RMER17C LTR ERVK -322 88 71 1 715 2200 257 153 33 chrX 17094574 17095281 -149555015 + ORR1E-int LTR MaLR 733 1527 -53 1 715 561 326 166 13 chrX 17095281 17095589 -149554707 + ORR1E LTR MaLR 1 355 -4 1 715 665 228 8 0 chrX 17096807 17096934 -149553362 + RSINE1 SINE B4 34 161 -4 1 715 180 0 0 0 chrX 17096938 17096958 -149553338 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 715 379 258 72 121 chrX 17097014 17097484 -149552812 - RMER17A2 LTR ERVK -420 486 80 1 715 716 242 21 27 chrX 17097491 17097678 -149552618 + L1MB4 LINE L1 5812 5997 -183 1 715 598 296 220 31 chrX 17097678 17097996 -149552300 + MER21B LTR ERV1 1 378 -485 1 715 239 290 0 0 chrX 17098038 17098100 -149552196 + MER21B LTR ERV1 519 580 -283 1 715 594 249 40 15 chrX 17099442 17099642 -149550654 + L1MC LINE L1 5287 5491 -2391 1 715 288 254 105 68 chrX 17099641 17099879 -149550417 - L1M5 LINE L1 -2007 4139 3866 1 715 353 222 0 0 chrX 17100182 17100245 -149550051 + RMER10A LTR ERVL 1 63 -379 1 715 1950 116 5 89 chrX 17100263 17100680 -149549616 - RMER17C LTR ERVK -28 382 1 1 715 4601 17 0 0 chrX 17100967 17101449 -149548847 - LTRIS_Mm LTR ERV1 0 482 1 1 715 1329 238 121 20 chrX 17101510 17101938 -149548358 + RLTR19-int LTR ERVK 2571 3001 -3136 1 715 285 203 0 14 chrX 17102106 17102176 -149548120 + RLTR19-int LTR ERVK 8714 8782 -177 1 715 647 248 124 109 chrX 17102341 17102952 -149547344 + RMER17C-int LTR ERVK 2607 3121 -117 1 715 2484 105 12 0 chrX 17102952 17103275 -149547021 + ORR1A2 LTR MaLR 1 327 0 1 715 647 277 112 124 chrX 17103275 17103322 -149546974 + RMER17C-int LTR ERVK 3122 3162 -76 1 715 1402 216 22 155 chrX 17103363 17103822 -149546474 + RMER10B LTR ERVL 1 398 0 1 715 858 56 8 16 chrX 17104928 17105055 -149545241 + (TTTCC)n Simple_repeat Simple_repeat 5 130 0 1 715 867 167 0 0 chrX 17105198 17105336 -149544960 + B1_Mus2 SINE Alu 9 146 -1 1 715 1172 261 55 41 chrX 17105407 17105898 -149544398 - L1M5 LINE L1 -2274 3872 3375 1 715 800 268 87 28 chrX 17106194 17106585 -149543711 + L1MC5 LINE L1 7272 7685 -276 1 715 7851 124 51 17 chrX 17106593 17107798 -149542498 - Lx4A LINE L1 0 7058 5813 1 715 1605 101 0 34 chrX 17107798 17108034 -149542262 + Lx4A LINE L1 5572 5799 -78 1 715 1433 235 72 67 chrX 17108034 17108168 -149542128 - RLTR40 LTR ERVK -302 515 393 1 715 5379 132 84 19 chrX 17108168 17109067 -149541229 + RMER17B LTR ERVK 1 958 0 1 715 1433 235 72 67 chrX 17109067 17109442 -149540854 - RLTR40 LTR ERVK -425 392 3 1 715 566 99 0 11 chrX 17109443 17109535 -149540761 + (CA)n Simple_repeat Simple_repeat 2 92 0 1 715 8123 88 13 16 chrX 17109544 17111240 -149539056 - L1Md_F3 LINE L1 -142 6916 5218 1 715 874 225 56 30 chrX 17111569 17111835 -149538461 + L1MA8 LINE L1 5993 6265 -26 1 715 393 272 0 80 chrX 17111854 17111966 -149538330 - PB1D9 SINE Alu -17 103 1 1 715 293 298 126 24 chrX 17111977 17112104 -149538192 - B1F1 SINE Alu 0 149 10 1 715 392 266 93 8 chrX 17112118 17112247 -149538049 - B1F SINE Alu -5 144 5 1 715 539 293 25 37 chrX 17112733 17112896 -149537400 + RSINE1 SINE B4 3 163 -2 2 715 280 321 0 0 chrX 17112915 17112990 -149537306 + BC1_Mm scRNA scRNA 2 76 -7 2 715 380 226 28 55 chrX 17113028 17113161 -149537135 - Lx7 LINE L1 -567 5733 5592 2 715 311 248 0 62 chrX 17113159 17113201 -149537095 + Lx7 LINE L1 5662 5697 -150 2 715 1339 95 26 5 chrX 17113201 17113392 -149536904 + B2_Mm2 SINE B2 1 195 0 2 715 311 235 8 73 chrX 17113392 17113474 -149536822 + Lx7 LINE L1 5698 5812 -1884 2 715 1805 179 154 0 chrX 17113542 17113906 -149536390 - MTC LTR MaLR 0 421 2 2 715 25 51 0 0 chrX 17114186 17114225 -149536071 + AT_rich Low_complexity Low_complexity 1 39 0 2 715 610 283 72 6 chrX 17114715 17114896 -149535400 - B3 SINE B2 -23 193 1 2 715 1427 204 75 86 chrX 17114977 17115146 -149535150 + ORR1C2 LTR MaLR 1 171 -213 2 715 450 0 0 0 chrX 17115146 17115196 -149535100 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 715 1427 204 75 86 chrX 17115196 17115412 -149534884 + ORR1C2 LTR MaLR 172 382 -2 2 715 5854 162 180 6 chrX 17115415 17116673 -149533623 + ORR1C2-int LTR MaLR 2 1478 -31 2 715 1945 169 61 3 chrX 17116782 17117145 -149533151 + ORR1C2 LTR MaLR 1 384 0 2 715 738 282 92 35 chrX 17117590 17117851 -149532445 - MLT1D LTR MaLR -3 502 227 2 715 1367 141 23 5 chrX 17118104 17118325 -149531971 - URR1B DNA MER1_type 0 225 1 2 715 242 296 185 0 chrX 17118464 17118545 -149531751 + PB1D10 SINE Alu 22 117 0 2 715 1777 150 85 12 chrX 17118591 17118921 -149531375 - ORR1B1 LTR MaLR 0 394 41 2 715 1603 245 38 87 chrX 17119037 17119655 -149530641 - RLTR18B LTR ERVK -48 568 14 2 715 28 48 0 0 chrX 17120200 17120242 -149530054 + AT_rich Low_complexity Low_complexity 1 42 0 2 715 497 221 29 14 chrX 17121946 17122084 -149528212 + RLTR19-int LTR ERVK 1169 1308 -4214 2 715 675 117 126 0 chrX 17122090 17122201 -149528095 + RMER6A LTR ERVK 1 125 -631 2 715 2421 132 111 19 chrX 17122192 17122669 -149527627 + RMER6A LTR ERVK 236 756 0 2 715 303 244 11 0 chrX 17122670 17122760 -149527536 + RLTR19-int LTR ERVK 1312 1402 -4120 2 715 482 257 88 7 chrX 17122916 17122939 -149527357 + B4 SINE B4 57 90 -202 2 715 924 87 0 0 chrX 17122939 17123066 -149527230 + B1_Mus1 SINE Alu 1 127 -21 2 715 782 212 55 155 chrX 17123122 17123412 -149526884 + RLTR19-int LTR ERVK 1604 1864 -3658 2 715 941 179 35 91 chrX 17123711 17123933 -149526363 + RMER17C LTR ERVK 1 199 -211 2 715 698 78 0 10 chrX 17123933 17124036 -149526260 + (TTC)n Simple_repeat Simple_repeat 3 104 0 2 715 941 179 35 91 chrX 17124036 17124132 -149526164 + RMER17C LTR ERVK 200 301 -109 2 715 229 175 41 89 chrX 17124199 17124368 -149525928 + (CTTG)n Simple_repeat Simple_repeat 4 164 0 2 715 7909 106 111 101 chrX 17124973 17125646 -149524650 + RMER17C-int LTR ERVK 1409 2097 -1141 2 715 1165 82 0 0 chrX 17125646 17125793 -149524503 - B1_Mus1 SINE Alu -1 147 1 2 715 7909 106 111 101 chrX 17125793 17126277 -149524019 + RMER17C-int LTR ERVK 2098 2601 -637 2 715 240 222 0 0 chrX 17126277 17126322 -149523974 - LSU-rRNA_Hsa rRNA rRNA -789 4246 4202 2 715 7909 106 111 101 chrX 17126322 17126929 -149523367 + RMER17C-int LTR ERVK 2602 3235 -3 2 715 1822 148 28 63 chrX 17126931 17127154 -149523142 + RMER17C LTR ERVK 1 231 -179 2 715 426 20 0 0 chrX 17127154 17127205 -149523091 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 715 1822 148 28 63 chrX 17127205 17127406 -149522890 + RMER17C LTR ERVK 232 410 0 2 715 442 158 10 31 chrX 17127463 17127561 -149522735 + RLTR19-int LTR ERVK 1870 1965 -3557 2 715 203 86 0 54 chrX 17127655 17127692 -149522604 + L3 LINE CR1 3707 3741 -748 2 715 441 125 0 0 chrX 17127692 17127764 -149522532 + RLTR19-int LTR ERVK 2056 2127 -3395 2 715 430 292 21 16 chrX 17127750 17127938 -149522358 + RLTR19-int LTR ERVK 2330 2518 -3619 2 715 275 203 14 63 chrX 17127947 17128089 -149522207 + (TTATA)n Simple_repeat Simple_repeat 4 138 0 2 715 414 266 166 65 chrX 17128102 17128440 -149521856 + RLTR19-int LTR ERVK 2523 2894 -3243 2 715 1733 139 60 28 chrX 17128519 17128838 -149521458 - ORR1A4 LTR MaLR 0 329 1 2 715 266 185 0 71 chrX 17129279 17129349 -149520947 + RLTR19-int LTR ERVK 3129 3193 -2944 2 715 2494 152 30 10 chrX 17129403 17129808 -149520488 + MTC LTR MaLR 1 413 -8 2 715 1361 175 40 127 chrX 17129949 17130421 -149519875 + RLTR19-int LTR ERVK 3526 3956 -2181 2 715 297 261 0 14 chrX 17130819 17130889 -149519407 + RLTR19-int LTR ERVK 4242 4310 -1827 2 715 1389 112 24 14 chrX 17131266 17131475 -149518821 + URR1B DNA MER1_type 15 225 0 2 715 24 32 0 0 chrX 17132265 17132296 -149518000 + AT_rich Low_complexity Low_complexity 1 31 0 2 715 346 206 44 0 chrX 17132344 17132412 -149517884 + MTE2a LTR MaLR 211 281 -98 2 715 768 125 35 42 chrX 17132425 17132567 -149517729 - URR1A DNA MER1_type -2 224 84 2 715 341 250 77 39 chrX 17132573 17132677 -149517619 + MTE2a LTR MaLR 272 379 0 2 715 197 65 32 0 chrX 17132970 17133001 -149517295 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 715 671 236 21 7 chrX 17133004 17133149 -149517147 - B1_Mur1 SINE Alu -1 148 2 2 715 324 319 26 26 chrX 17133150 17133266 -149517030 - PB1D10 SINE Alu -1 116 1 2 715 243 283 228 17 chrX 17135233 17135470 -149514826 + L1MB4 LINE L1 5863 6149 -31 2 715 216 97 0 0 chrX 17135542 17135573 -149514723 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2 715 433 284 165 0 chrX 17135589 17135716 -149514580 - B1F SINE Alu -1 148 1 2 715 4896 225 119 34 chrX 17136423 17138366 -149511930 + Lx9 LINE L1 5441 7603 -41 2 715 478 152 15 152 chrX 17139693 17139711 -149510585 + MT2B LTR ERVL 151 255 -346 2 715 1047 54 0 75 chrX 17139711 17139812 -149510484 + B1_Mm SINE Alu 1 91 -56 2 715 2041 47 16 0 chrX 17139812 17140065 -149510231 + L1Md_F2 LINE L1 6325 6581 -1 2 715 478 152 15 152 chrX 17140065 17140077 -149510219 + MT2B LTR ERVL 256 264 -337 2 715 1047 54 0 75 chrX 17140077 17140111 -149510185 + B1_Mm SINE Alu 92 137 -10 2 715 338 17 0 63 chrX 17140111 17140174 -149510122 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 2 715 183 100 0 0 chrX 17140187 17140217 -149510079 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 2 715 869 76 8 0 chrX 17140496 17140615 -149509681 - B1_Mus1 SINE Alu -21 127 8 2 715 501 215 107 34 chrX 17140615 17140640 -149509656 - ID_B1 SINE B4 0 219 65 2 715 383 275 0 12 chrX 17140777 17140858 -149509438 + ID4 SINE ID 2 81 -2 2 715 308 238 11 35 chrX 17140868 17140922 -149509374 + polypurine Low_complexity Low_complexity 4 54 0 2 715 258 81 0 0 chrX 17140922 17140959 -149509337 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 2 715 308 238 11 35 chrX 17140959 17140991 -149509305 + polypurine Low_complexity Low_complexity 55 87 0 2 715 308 341 0 0 chrX 17141011 17141096 -149509200 + B4 SINE B4 4 88 -204 2 715 379 191 0 29 chrX 17141187 17141257 -149509039 + ID4_ SINE ID 12 79 -4 2 715 213 319 61 50 chrX 17141189 17141288 -149509008 + B4A SINE B4 14 113 -179 2 715 254 125 21 0 chrX 17141487 17141535 -149508761 - Lx4A LINE L1 -11 7047 6999 2 715 183 139 0 0 chrX 17141786 17141822 -149508474 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 715 251 258 96 8 chrX 17141951 17142076 -149508220 + HAL1 LINE L1 1085 1220 -1287 2 715 243 286 239 25 chrX 17142303 17142500 -149507796 + HAL1 LINE L1 1469 1707 -800 2 715 371 217 133 0 chrX 17142787 17142930 -149507366 + Lx7 LINE L1 7535 7696 0 2 715 306 254 0 0 chrX 17143315 17143378 -149506918 - HY3 scRNA scRNA -37 64 2 2 715 337 228 32 179 chrX 17144561 17144684 -149505612 - PB1D10 SINE Alu -44 105 1 2 715 281 184 52 19 chrX 17144881 17144960 -149505336 - PB1 SINE Alu -58 91 12 2 715 430 255 10 0 chrX 17145936 17146034 -149504262 + MLT1C LTR MaLR 67 165 -302 2 715 483 273 139 7 chrX 17146207 17146351 -149503945 - RSINE1 SINE B4 0 165 3 2 715 529 333 46 0 chrX 17146827 17146980 -149503316 + RSINE1 SINE B4 4 163 -2 2 715 251 210 0 0 chrX 17149618 17149680 -149500616 + T-rich Low_complexity Low_complexity 1 62 0 2 715 477 300 175 49 chrX 17149749 17150057 -149500239 + MER31B LTR ERV1 12 358 -108 2 715 3873 92 2 14 chrX 17150130 17150681 -149499615 - L1_Mus4 LINE L1 -7 6629 6086 2 715 514 261 25 0 chrX 17150764 17150883 -149499413 - B1_Mur2 SINE Alu -1 148 27 2 715 432 266 0 9 chrX 17150881 17150991 -149499305 - PB1D10 SINE Alu -2 115 7 2 715 298 266 21 31 chrX 17150904 17151001 -149499295 - ID_B1 SINE B4 -50 174 79 2 715 28217 107 8 32 chrX 17151158 17157750 -149492546 + L1_Mus3 LINE L1 217 6634 -4 2 715 1704 210 16 0 chrX 17158648 17158957 -149491339 + MTC LTR MaLR 108 421 0 2 715 10630 154 38 20 chrX 17158957 17160095 -149490201 + L1_Mur3 LINE L1 1852 3002 -2878 2 715 618 51 0 0 chrX 17160095 17160173 -149490123 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 2 715 10630 154 38 20 chrX 17160173 17160810 -149489486 + L1_Mur3 LINE L1 3003 3662 -2218 2 715 1942 148 15 9 chrX 17160810 17161137 -149489159 - ORR1A4 LTR MaLR 0 329 1 2 715 10630 154 38 20 chrX 17161137 17161599 -149488697 + L1_Mur3 LINE L1 3663 4127 -1753 2 715 4202 25 12 2 chrX 17161599 17162087 -149488209 - MT2_Mm LTR ERVL 0 493 1 2 715 302 0 0 0 chrX 17162087 17162125 -149488171 - MERVL-int LTR ERVL 0 5485 5448 2 715 361 111 26 53 chrX 17162125 17162201 -149488095 - ORR1A3-int LTR MaLR -1323 640 567 2 715 30308 27 3 0 chrX 17162201 17165856 -149484440 - MERVL-int LTR ERVL -114 5371 1707 2 715 2178 19 0 0 chrX 17165856 17166112 -149484184 - MT2_Mm LTR ERVL -237 256 1 2 715 951 152 266 0 chrX 17166114 17166351 -149483945 + L1_Mur3 LINE L1 4127 4426 -1454 2 715 903 194 43 11 chrX 17166489 17166677 -149483619 - L1_Mur3 LINE L1 -1927 3953 3760 2 715 351 0 0 0 chrX 17166679 17166718 -149483578 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 715 399 292 9 36 chrX 17167195 17167305 -149482991 + PB1D10 SINE Alu 1 107 -10 2 715 420 150 0 0 chrX 17167648 17167728 -149482568 + (GGGA)n Simple_repeat Simple_repeat 3 82 0 2 715 197 83 28 0 chrX 17168371 17168407 -149481889 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 2 715 1051 274 105 3 chrX 17169312 17169656 -149480640 + MTE2a LTR MaLR 1 379 0 2 715 526 296 0 88 chrX 17169680 17169839 -149480457 - ID_B1 SINE B4 0 224 80 2 89 456 335 43 65 chrX 17170258 17170443 -149479853 + MTEa LTR MaLR 3 183 -196 2 716 2035 219 39 126 chrX 17170819 17171487 -149478809 - RMER19C LTR ERVK -1 610 1 2 716 694 215 107 0 chrX 17172476 17172709 -149477587 - Lx9 LINE L1 -8 7636 7379 2 716 871 168 0 0 chrX 17172718 17172873 -149477423 + Lx9 LINE L1 7205 7359 -285 2 716 1395 339 138 23 chrX 17173286 17173918 -149476378 + Charlie25 DNA MER1_type 237 916 -1608 2 716 180 0 0 0 chrX 17173918 17173938 -149476358 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 716 1395 339 138 23 chrX 17173938 17174477 -149475819 + Charlie25 DNA MER1_type 917 1543 -981 2 716 976 261 123 0 chrX 17174480 17174805 -149475491 - Tigger7 DNA MER2_type -50 2441 2077 2 716 1019 281 94 19 chrX 17174827 17175350 -149474946 - Lx9 LINE L1 -31 7613 7052 2 716 303 395 25 19 chrX 17175972 17176132 -149474164 + MIRb SINE MIR 31 191 -77 2 716 1458 189 100 8 chrX 17176655 17176971 -149473325 + MTD LTR MaLR 37 406 -13 2 716 554 283 70 16 chrX 17177015 17177202 -149473094 - B3A SINE B2 -1 197 1 2 716 504 250 170 113 chrX 17177292 17177504 -149472792 - ID_B1 SINE B4 0 224 1 2 716 363 23 0 0 chrX 17178080 17178124 -149472172 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 716 658 340 0 0 chrX 17178185 17178344 -149471952 - B4A SINE B4 -132 160 2 2 716 674 22 33 0 chrX 17179605 17179695 -149470601 + (TTTTC)n Simple_repeat Simple_repeat 5 97 0 3 716 1222 48 7 0 chrX 17179696 17179842 -149470454 - B1_Mm SINE Alu 0 147 1 3 716 509 299 90 69 chrX 17179879 17180299 -149469997 + MLT1E1 LTR MaLR 23 602 -52 3 716 690 318 60 17 chrX 17180326 17180624 -149469672 + MLT1E1-int LTR MaLR 1 434 -937 3 716 29 0 0 0 chrX 17180792 17180821 -149469475 + AT_rich Low_complexity Low_complexity 1 29 0 3 716 4295 54 54 3 chrX 17180829 17182005 -149468291 - L1Md_F2 LINE L1 -14 6568 5309 3 716 388 214 25 8 chrX 17182042 17182160 -149468136 + Lx7 LINE L1 7577 7696 0 3 716 1605 199 100 9 chrX 17182206 17182546 -149467750 - MTD LTR MaLR -39 380 10 3 716 196 344 74 8 chrX 17182617 17182735 -149467561 - MIRc SINE MIR -93 175 45 3 716 549 134 0 58 chrX 17182750 17182853 -149467443 - URR1B DNA MER1_type 0 225 129 3 716 721 27 36 0 chrX 17182853 17182963 -149467333 + L1Md_F3 LINE L1 6470 6583 -1 3 716 2759 185 27 2 chrX 17183015 17183572 -149466724 + L1_Mur2 LINE L1 4728 5298 -579 3 716 382 120 320 0 chrX 17183683 17183758 -149466538 - URR1B DNA MER1_type -127 98 1 3 716 282 39 58 0 chrX 17183825 17183877 -149466419 + (CAA)n Simple_repeat Simple_repeat 3 57 0 3 716 398 346 91 16 chrX 17184386 17184694 -149465602 + Tigger5 DNA MER2_type 741 1071 -1335 3 716 1947 155 13 69 chrX 17184706 17185081 -149465215 - ORR1B1 LTR MaLR 0 394 41 3 716 442 279 190 19 chrX 17185638 17185843 -149464453 + RMER15 LTR ERVL 294 533 -42 3 716 1217 219 127 18 chrX 17186163 17186503 -149463793 + MTE2a LTR MaLR 1 377 -2 3 716 700 301 169 21 chrX 17186634 17187018 -149463278 + MLT1E1-int LTR MaLR 682 1122 -367 3 716 301 306 1 133 chrX 17186988 17187131 -149463165 + MLT1E1 LTR MaLR 446 621 -33 3 716 2051 137 9 0 chrX 17187212 17187527 -149462769 - ORR1A3 LTR MaLR -8 318 1 3 716 863 317 53 7 chrX 17187741 17188024 -149462272 + Tigger7 DNA MER2_type 175 470 -2021 3 716 402 304 123 7 chrX 17188027 17188173 -149462123 + Tigger7 DNA MER2_type 2327 2489 -2 3 716 972 207 55 5 chrX 17188493 17188692 -149461604 - B3 SINE B2 -7 209 1 3 716 227 310 0 11 chrX 17188884 17188972 -149461324 - L1MA10 LINE L1 -8 6326 6240 3 716 396 346 73 0 chrX 17189010 17189146 -149461150 + RSINE1 SINE B4 3 148 -17 3 716 225 0 0 0 chrX 17189147 17189172 -149461124 + (CATA)n Simple_repeat Simple_repeat 4 28 0 3 716 450 241 128 25 chrX 17189231 17189390 -149460906 - MLT1A0 LTR MaLR -37 328 162 3 716 285 293 0 0 chrX 17189422 17189497 -149460799 + ERVL-B4-int LTR ERVL 5640 5714 0 3 716 296 342 0 0 chrX 17189542 17189615 -149460681 - ID4_ SINE ID -5 78 6 3 716 415 356 31 0 chrX 17189625 17189780 -149460516 + MLT2B3 LTR ERVL 19 178 -376 3 716 3390 183 96 8 chrX 17189780 17190432 -149459864 + RMER19B LTR ERVK 1 710 -192 3 716 2633 119 15 2 chrX 17190432 17190843 -149459453 - BGLII_Mus LTR ERVK 0 422 7 3 716 402 167 94 12 chrX 17190843 17190928 -149459368 + RMER19B LTR ERVK 544 635 -267 3 716 207 0 0 0 chrX 17190930 17190953 -149459343 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3 716 2595 115 28 2 chrX 17190959 17191387 -149458909 - L1_Mur2 LINE L1 -805 5072 4634 3 716 189 0 0 0 chrX 17191387 17191408 -149458888 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3 716 34047 68 2 14 chrX 17191410 17197569 -149452727 - L1Md_F2 LINE L1 -11 6571 485 3 716 260 241 35 49 chrX 17197576 17197720 -149452576 - L1M4b LINE L1 -3656 3678 3537 3 716 236 271 0 67 chrX 17198035 17198110 -149452186 + B1_Mus1 SINE Alu 18 87 -61 3 716 234 156 0 0 chrX 17198112 17198157 -149452139 + A-rich Low_complexity Low_complexity 3 47 0 3 716 932 118 7 36 chrX 17198170 17198443 -149451853 + GA-rich Low_complexity Low_complexity 1 265 0 3 716 601 81 80 14 chrX 17198489 17198627 -149451669 + GA-rich Low_complexity Low_complexity 5 151 0 3 716 854 159 0 6 chrX 17198683 17198835 -149451461 + GA-rich Low_complexity Low_complexity 5 155 0 3 716 1167 107 0 0 chrX 17198835 17199013 -149451283 + (GGAAA)n Simple_repeat Simple_repeat 1 178 0 3 716 854 159 0 6 chrX 17199013 17199107 -149451189 + polypurine Low_complexity Low_complexity 1 93 0 3 716 941 99 17 17 chrX 17199109 17199284 -149451012 + (GGAAA)n Simple_repeat Simple_repeat 5 179 0 3 716 22 56 0 0 chrX 17204561 17204597 -149445699 + AT_rich Low_complexity Low_complexity 1 36 0 3 716 191 170 21 0 chrX 17204643 17204690 -149445606 + GA-rich Low_complexity Low_complexity 2 49 0 3 716 435 310 24 12 chrX 17204705 17204875 -149445421 + GA-rich Low_complexity Low_complexity 3 174 0 3 716 243 246 14 27 chrX 17204893 17205039 -149445257 + GA-rich Low_complexity Low_complexity 1 144 0 3 716 425 308 19 29 chrX 17205054 17205519 -149444777 + GA-rich Low_complexity Low_complexity 1 460 0 3 716 576 143 37 19 chrX 17205541 17205648 -149444648 + B1_Mur4 SINE Alu 41 149 -1 3 716 195 114 0 0 chrX 17205648 17205683 -149444613 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 3 716 342 320 13 20 chrX 17205706 17205856 -149444440 + GA-rich Low_complexity Low_complexity 1 149 0 3 716 1510 173 89 24 chrX 17205880 17206217 -149444079 + ORR1B2 LTR MaLR 1 359 -8 3 716 2038 142 48 20 chrX 17206271 17206584 -149443712 + RMER17D2 LTR ERVK 1 325 -484 3 716 1368 67 0 0 chrX 17206584 17206764 -149443532 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 3 716 2038 142 48 20 chrX 17206764 17206846 -149443450 + RMER17D2 LTR ERVK 326 406 -403 3 716 619 217 34 34 chrX 17206818 17206966 -149443330 + MLT2B2 LTR ERVL 415 562 0 3 716 486 262 117 0 chrX 17207067 17207281 -149443015 - L1ME1 LINE L1 -298 5881 5643 3 716 3076 148 11 19 chrX 17207298 17207820 -149442476 - RLTR28 LTR ERVL -6 518 1 3 716 250 291 101 63 chrX 17207861 17208019 -149442277 + RSINE1 SINE B4 2 165 0 3 716 476 287 10 94 chrX 17208029 17208337 -149441959 - L1ME1 LINE L1 -578 5601 5320 3 716 354 207 120 54 chrX 17208347 17208439 -149441857 - ID_B1 SINE B4 -125 99 2 3 716 329 312 0 31 chrX 17208444 17208540 -149441756 - PB1D10 SINE Alu -2 115 23 3 716 25 31 0 0 chrX 17208558 17208590 -149441706 + AT_rich Low_complexity Low_complexity 1 32 0 3 716 226 210 102 31 chrX 17208715 17208843 -149441453 - L1ME1 LINE L1 -834 5312 5176 3 716 298 312 113 40 chrX 17208883 17209033 -149441263 - RSINE1 SINE B4 -4 161 1 3 716 507 236 57 0 chrX 17209341 17209514 -149440782 + L1MEc LINE L1 1694 1860 -4555 3 716 595 302 67 20 chrX 17209539 17209794 -149440502 - MLT1D LTR MaLR 0 505 322 3 716 217 329 53 0 chrX 17210249 17210325 -149439971 + ID4_ SINE ID 4 83 0 3 716 435 244 82 12 chrX 17210464 17210628 -149439668 - B3A SINE B2 -27 189 1 3 716 327 313 26 0 chrX 17210845 17210960 -149439336 - PB1D9 SINE Alu -2 118 1 3 716 262 200 154 0 chrX 17211354 17211419 -149438877 - tRNA-Ala-GCY_ tRNA tRNA 0 75 1 3 716 5940 131 78 20 chrX 17211646 17212495 -149437801 + RLTR25A LTR ERVK 7 896 -207 3 716 540 0 0 0 chrX 17212495 17212555 -149437741 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 716 5940 131 78 20 chrX 17212555 17212742 -149437554 + RLTR25A LTR ERVK 897 1102 -1 3 716 777 286 22 65 chrX 17212887 17213119 -149437177 - ID_B1 SINE B4 0 224 3 3 716 304 241 0 12 chrX 17213405 17213485 -149436811 - Kanga1 DNA Tc2 -2 1743 1665 3 716 25 0 0 0 chrX 17213526 17213551 -149436745 + AT_rich Low_complexity Low_complexity 1 25 0 3 716 1324 287 48 94 chrX 17213659 17213871 -149436425 - Lx8 LINE L1 -31 7442 7217 3 716 1674 240 34 45 chrX 17213871 17214378 -149435918 - RLTR16 LTR ERVK 0 505 5 3 716 1324 287 48 94 chrX 17214378 17214811 -149435485 - Lx8 LINE L1 -257 7216 6827 3 716 594 341 55 4 chrX 17214926 17215182 -149435114 - Kanga1 DNA Tc2 -150 1595 1327 3 716 730 328 102 10 chrX 17215204 17215595 -149434701 - Kanga1 DNA Tc2 -1293 452 26 3 716 482 264 65 73 chrX 17215948 17216209 -149434087 - L1M5 LINE L1 -2208 3938 3680 3 716 245 219 138 56 chrX 17216472 17216597 -149433699 - Lx8 LINE L1 0 7473 7340 3 716 875 10 0 9 chrX 17216597 17216702 -149433594 + (TTTTC)n Simple_repeat Simple_repeat 3 106 0 3 716 1172 63 0 0 chrX 17216704 17216846 -149433450 - B1_Mus1 SINE Alu -6 142 1 3 716 245 219 138 56 chrX 17216846 17216877 -149433419 - Lx8 LINE L1 -134 7339 7301 3 716 2165 239 133 50 chrX 17216913 17217164 -149433132 - Lx8 LINE L1 -356 7117 6852 3 716 619 145 483 0 chrX 17217164 17217309 -149432987 + B3 SINE B2 2 216 0 3 716 2165 239 133 50 chrX 17217309 17217800 -149432496 - Lx8 LINE L1 -622 6851 6313 3 716 264 387 0 0 chrX 17218063 17218138 -149432158 - B4 SINE B4 -2 290 216 3 716 859 264 53 10 chrX 17218150 17218357 -149431939 - B3 SINE B2 0 216 1 3 716 402 307 62 16 chrX 17218357 17218449 -149431847 - B4 SINE B4 -63 229 132 3 716 31949 28 0 0 chrX 17218611 17223290 -149427006 - L1Md_A LINE L1 0 6582 1904 3 716 4641 10 2 12 chrX 17223290 17223788 -149426508 - MT2_Mm LTR ERVL 0 493 1 3 716 322 0 0 0 chrX 17223788 17223826 -149426470 - MERVL-int LTR ERVL 0 5485 5448 3 716 357 191 46 35 chrX 17223826 17223913 -149426383 - ORR1A3-int LTR MaLR -1323 640 553 3 716 48314 19 2 0 chrX 17223913 17229264 -149421032 - MERVL-int LTR ERVL -125 5360 1 3 716 3930 9 117 26 chrX 17229264 17229716 -149420580 - MT2_Mm LTR ERVL 0 493 1 3 716 5431 123 57 6 chrX 17229716 17231321 -149418975 - L1Md_Gf LINE L1 -3975 1911 125 3 716 221 360 22 0 chrX 17231412 17231501 -149418795 + BC1_Mm scRNA scRNA 5 95 -57 3 716 821 273 40 44 chrX 17231974 17232295 -149418001 + Lx6 LINE L1 6078 6566 -492 3 716 1082 111 22 6 chrX 17232295 17232453 -149417843 + B2_Mm1t SINE B2 1 160 -33 3 716 228 35 0 0 chrX 17232453 17232482 -149417814 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 3 716 1082 111 22 6 chrX 17232482 17232504 -149417792 + B2_Mm1t SINE B2 161 183 -10 3 716 1234 302 33 38 chrX 17232504 17233015 -149417281 + Lx6 LINE L1 6535 7385 -75 3 716 861 299 128 79 chrX 17233031 17233576 -149416720 + MTE-int LTR MaLR 273 844 -736 3 716 323 318 18 0 chrX 17233671 17233781 -149416515 + MLT1B LTR MaLR 288 500 -5 3 716 515 272 0 9 chrX 17233815 17233838 -149416458 + B1_Mur1 SINE Alu 11 32 -117 3 716 429 20 0 0 chrX 17233838 17233888 -149416408 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 716 515 272 0 9 chrX 17233888 17233979 -149416317 + B1_Mur1 SINE Alu 33 123 -26 3 716 1118 117 6 0 chrX 17233987 17234166 -149416130 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 716 331 98 16 16 chrX 17234196 17234258 -149416038 + (CATA)n Simple_repeat Simple_repeat 1 62 0 3 716 487 209 86 53 chrX 17234822 17235009 -149415287 + MER53 DNA hAT 1 193 0 3 716 1696 148 30 96 chrX 17235507 17235902 -149414394 - Lx4B LINE L1 -4 7054 6686 3 716 1640 110 109 4 chrX 17235904 17236178 -149414118 + Lx4B LINE L1 5870 6172 -886 3 716 768 261 79 73 chrX 17236193 17236503 -149413793 - RLTR25A LTR ERVK -12 1091 761 3 716 2273 110 58 6 chrX 17236578 17236889 -149413407 + ORR1A2 LTR MaLR 1 327 0 3 716 34 24 0 0 chrX 17236929 17236970 -149413326 + AT_rich Low_complexity Low_complexity 1 41 0 3 716 2748 171 210 31 chrX 17237099 17237785 -149412511 - RLTR25B LTR ERVK -175 853 45 3 716 1198 175 0 0 chrX 17237785 17237979 -149412317 + Lx4B LINE L1 6177 6370 -688 3 716 28 29 0 0 chrX 17238061 17238096 -149412200 + AT_rich Low_complexity Low_complexity 1 35 0 3 716 599 322 105 4 chrX 17238257 17238485 -149411811 - Lx8 LINE L1 -221 7252 7002 4 716 21 36 0 0 chrX 17238498 17238526 -149411770 + AT_rich Low_complexity Low_complexity 1 28 0 4 716 389 342 0 27 chrX 17238538 17238649 -149411647 - RSINE1 SINE B4 -54 111 4 4 716 1263 235 110 42 chrX 17238649 17239057 -149411239 - Lx8 LINE L1 -455 7018 6583 4 716 254 171 375 0 chrX 17239545 17239633 -149410663 + URR1B DNA MER1_type 1 121 -104 4 716 448 55 0 0 chrX 17239635 17239690 -149410606 - L1_Mus1 LINE L1 -546 6021 5967 4 716 4342 59 2 2 chrX 17239690 17240199 -149410097 + L1_Mus1 LINE L1 6059 6567 0 4 716 765 72 0 51 chrX 17240200 17240317 -149409979 + URR1B DNA MER1_type 111 221 -4 4 716 236 53 26 0 chrX 17240440 17240478 -149409818 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 716 1294 54 0 7 chrX 17240480 17240629 -149409667 - B1_Mus1 SINE Alu 0 148 1 4 716 22 0 0 0 chrX 17240639 17240661 -149409635 + AT_rich Low_complexity Low_complexity 1 22 0 4 716 393 273 40 25 chrX 17240720 17241059 -149409237 - Lx8 LINE L1 -1538 6106 5717 4 716 846 318 100 19 chrX 17241367 17241797 -149408499 + Lx8 LINE L1 6975 7439 -34 4 716 1747 145 7 3 chrX 17241811 17242095 -149408201 + ORR1A4 LTR MaLR 1 285 -41 4 716 388 136 0 0 chrX 17242095 17242161 -149408135 + L1VL1 LINE L1 186 251 -6171 4 716 33014 86 17 12 chrX 17242169 17247583 -149402713 + L1Md_F2 LINE L1 174 5585 -298 4 716 7988 65 21 5 chrX 17247584 17248561 -149401735 + L1Md_F2 LINE L1 5587 6579 -3 4 716 342 67 0 0 chrX 17248561 17248606 -149401690 + ORR1A4 LTR MaLR 274 318 -8 4 716 3566 174 31 9 chrX 17248610 17248850 -149401446 + ORR1A4-int LTR MaLR 1 244 -1719 4 716 423 0 0 0 chrX 17248850 17248897 -149401399 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 716 3566 174 31 9 chrX 17248897 17249310 -149400986 + ORR1A4-int LTR MaLR 245 668 -1295 4 716 1321 152 28 5 chrX 17249363 17249581 -149400715 - Lx2 LINE L1 0 6997 6775 4 716 6942 124 14 13 chrX 17249581 17250928 -149399368 - Lx2 LINE L1 -354 6643 5301 4 716 318 26 0 0 chrX 17250931 17250970 -149399326 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 716 505 213 50 59 chrX 17250970 17251035 -149399261 - RMER17C LTR ERVK -135 275 208 4 716 1112 66 18 6 chrX 17251035 17251203 -149399093 + (GGGAGA)n Simple_repeat Simple_repeat 6 175 0 4 716 505 213 50 59 chrX 17251203 17251357 -149398939 - RMER17C LTR ERVK -203 207 59 4 716 605 132 104 0 chrX 17251367 17251473 -149398823 - Lx2 LINE L1 -616 5261 5145 4 716 656 168 0 124 chrX 17253483 17253612 -149396684 + MT2B LTR ERVL 175 287 -314 4 716 7462 128 30 3 chrX 17253571 17254784 -149395512 + ORR1A4-int LTR MaLR 718 1963 0 4 716 1901 119 19 72 chrX 17254784 17255126 -149395170 + ORR1A4 LTR MaLR 1 371 -8 4 716 3917 96 21 9 chrX 17255948 17256483 -149393813 - Lx3_Mus LINE L1 -4 7005 6465 4 716 392 286 83 27 chrX 17257149 17257369 -149392927 - L1MC LINE L1 -311 5813 5580 4 716 231 301 52 52 chrX 17257608 17257685 -149392611 - ID4_ SINE ID -3 80 4 4 716 2059 155 50 25 chrX 17258172 17258529 -149391767 + ORR1B2 LTR MaLR 1 366 -1 4 716 3016 219 100 22 chrX 17258689 17259501 -149390795 + RCHARR1 DNA MER1_type 93 967 -7 4 716 22 35 0 0 chrX 17259546 17259575 -149390721 + AT_rich Low_complexity Low_complexity 1 29 0 4 716 770 293 81 27 chrX 17260042 17260375 -149389921 + ORR1E LTR MaLR 1 351 -8 4 716 852 280 67 75 chrX 17260595 17261116 -149389180 + L1MC4 LINE L1 5303 5819 -2063 4 716 722 271 11 28 chrX 17261119 17261301 -149388995 + B3A SINE B2 4 182 -16 4 716 4557 173 65 8 chrX 17261341 17262097 -149388199 + Lx5 LINE L1 6249 7047 -3 4 716 21 36 0 0 chrX 17262102 17262130 -149388166 + AT_rich Low_complexity Low_complexity 1 28 0 4 716 985 286 84 110 chrX 17262146 17262587 -149387709 - MLT1C LTR MaLR 0 467 9 4 716 2138 176 55 3 chrX 17262636 17263001 -149387295 + ORR1C2 LTR MaLR 1 384 0 4 716 354 219 22 99 chrX 17263141 17263232 -149387064 - ID SINE ID -140 84 1 4 716 434 307 0 26 chrX 17263238 17263355 -149386941 - PB1D10 SINE Alu -1 116 3 4 716 387 0 0 0 chrX 17263415 17263458 -149386838 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 716 379 275 0 0 chrX 17263576 17263656 -149386640 - ID2 SINE ID -1 82 3 4 716 247 147 40 13 chrX 17264140 17264216 -149386080 + L1MC LINE L1 3154 3231 -2915 4 716 444 243 61 8 chrX 17264220 17264373 -149385923 - L1M5 LINE L1 -2748 3398 3239 4 716 517 216 25 25 chrX 17264500 17264619 -149385677 + PB1D9 SINE Alu 1 119 -1 4 716 249 293 7 57 chrX 17264796 17264937 -149385359 + L1MC4 LINE L1 7097 7230 -812 4 716 279 231 44 44 chrX 17265005 17265073 -149385223 + ID2 SINE ID 9 76 -7 4 716 387 279 133 32 chrX 17265723 17266021 -149384275 + MLT1A0 LTR MaLR 1 344 -21 4 716 1067 239 189 13 chrX 17266271 17266584 -149383712 + MTE2b LTR MaLR 1 368 -11 4 716 891 76 168 0 chrX 17266740 17266859 -149383437 + B1_Mus1 SINE Alu 1 139 -9 4 716 245 29 29 0 chrX 17266859 17266893 -149383403 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 716 261 83 0 0 chrX 17267064 17267100 -149383196 + (T)n Simple_repeat Simple_repeat 1 36 0 4 716 423 204 40 35 chrX 17267100 17267273 -149383023 - RMER17C LTR ERVK -135 275 102 4 716 1820 191 121 46 chrX 17267324 17267779 -149382517 - ORR1D1-int LTR MaLR -881 489 1 4 716 278 160 0 0 chrX 17267779 17267829 -149382467 - ORR1D1 LTR MaLR 0 374 325 4 716 954 308 28 21 chrX 17267882 17268167 -149382129 + B4 SINE B4 2 288 -4 4 716 480 18 0 0 chrX 17268168 17268225 -149382071 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 716 210 250 20 20 chrX 17268238 17268287 -149382009 + ID4 SINE ID 33 81 -2 4 716 614 54 0 0 chrX 17268466 17268540 -149381756 - Lx2 LINE L1 -230 6767 6694 4 716 1227 67 22 33 chrX 17268540 17268724 -149381572 + L1_Mus3 LINE L1 6455 6636 -2 4 716 223 189 0 0 chrX 17269367 17269404 -149380892 + MIRb SINE MIR 32 68 -200 4 716 6280 62 0 5 chrX 17269723 17270471 -149379825 - L1Md_F2 LINE L1 -12 6570 5827 4 716 253 55 0 53 chrX 17271173 17271230 -149379066 - L1Md_F2 LINE L1 0 6582 6529 4 716 183 344 0 0 chrX 17271324 17271385 -149378911 + MIRb SINE MIR 168 228 -40 4 716 507 344 51 63 chrX 17271768 17272100 -149378196 - MLT2F LTR ERVL -96 567 240 4 716 325 321 22 22 chrX 17272155 17272292 -149378004 - LTR33C LTR ERVL -487 142 6 4 716 644 144 0 43 chrX 17272835 17272951 -149377345 + Lx4B LINE L1 6716 6826 -232 4 716 315 159 12 47 chrX 17272955 17273041 -149377255 + Lx4B LINE L1 6976 7058 0 4 716 285 373 53 0 chrX 17273665 17273809 -149376487 + LTR33 LTR ERVL 54 205 -310 4 716 4753 4 0 12 chrX 17273812 17274311 -149375985 - MT2_Mm LTR ERVL 0 493 1 4 716 641 306 43 27 chrX 17274915 17275103 -149375193 + MER20 DNA MER1_type 27 217 -2 4 716 528 202 67 0 chrX 17275649 17275753 -149374543 + ORR1D2 LTR MaLR 1 111 -259 4 716 672 269 70 6 chrX 17275839 17276011 -149374285 + ORR1D2 LTR MaLR 121 303 -67 4 716 3225 17 0 23 chrX 17276289 17276643 -149373653 + ORR1A0 LTR MaLR 1 346 0 4 716 15283 52 1 1 chrX 17276643 17278434 -149371862 + ORR1A0-int LTR MaLR 1 1792 0 4 716 3019 20 0 25 chrX 17278434 17278789 -149371507 + ORR1A0 LTR MaLR 1 346 0 4 716 392 405 48 14 chrX 17278789 17278997 -149371299 - L4 LINE RTE -422 1607 1393 4 716 260 297 0 26 chrX 17279282 17279358 -149370938 + tRNA-Ala-GCY_ tRNA tRNA 1 74 -1 4 716 202 257 84 14 chrX 17279364 17279435 -149370861 - MIRc SINE MIR -119 149 74 4 716 332 290 95 85 chrX 17279446 17279657 -149370639 - MT2A LTR ERVL -187 346 134 4 716 942 311 65 69 chrX 17279790 17280325 -149369971 - MT2A LTR ERVL 0 533 1 4 716 4803 94 6 0 chrX 17280605 17281264 -149369032 + L1_Mus3 LINE L1 5976 6638 0 4 716 387 330 0 14 chrX 17281354 17281473 -149368823 + B1F1 SINE Alu 1 115 -5 4 716 1656 200 15 97 chrX 17281523 17281916 -149368380 + MTEb LTR MaLR 18 378 -1 4 716 1294 234 50 23 chrX 17281918 17282260 -149368036 + MTEb-int LTR MaLR 2 352 -1228 4 716 326 324 37 0 chrX 17282253 17282361 -149367935 + MTEb-int LTR MaLR 484 595 -985 4 716 816 193 0 21 chrX 17282361 17282504 -149367792 + B1_Mur3 SINE Alu 3 142 -7 4 716 249 57 0 0 chrX 17282507 17282542 -149367754 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 4 716 1159 320 50 26 chrX 17282593 17282972 -149367324 + MTEb-int LTR MaLR 691 1078 -502 4 716 2326 148 100 45 chrX 17282969 17283437 -149366859 + RLTR19 LTR ERVK 6 499 0 4 716 2042 266 40 26 chrX 17283437 17283935 -149366361 + MTEb-int LTR MaLR 1066 1570 -10 4 716 1110 272 57 46 chrX 17283946 17284316 -149365980 + MTEb LTR MaLR 2 375 -4 4 716 3145 63 10 0 chrX 17284683 17285077 -149365219 - L1_Mus1 LINE L1 0 6567 6170 4 716 1344 256 116 11 chrX 17285085 17285464 -149364832 + MTD LTR MaLR 1 419 0 4 716 232 363 106 0 chrX 17285535 17285648 -149364648 - LTR33A LTR ERVL -202 318 194 4 716 431 202 138 0 chrX 17285673 17285782 -149364514 - L1MB3 LINE L1 -267 5916 5793 4 716 254 51 51 0 chrX 17285897 17285936 -149364360 + (TATG)n Simple_repeat Simple_repeat 1 41 0 4 716 940 281 5 5 chrX 17285961 17286165 -149364131 - ID_B1 SINE B4 -20 204 1 4 716 21 36 0 0 chrX 17286230 17286258 -149364038 + AT_rich Low_complexity Low_complexity 1 28 0 4 716 27 73 0 0 chrX 17286786 17286841 -149363455 + AT_rich Low_complexity Low_complexity 1 55 0 4 716 5876 59 0 0 chrX 17287399 17288131 -149362165 - L1_Mus1 LINE L1 0 6567 5836 4 716 4898 92 3 0 chrX 17288131 17288824 -149361472 + L1_Mm LINE L1 5024 5718 -165 4 716 222 320 13 0 chrX 17289084 17289159 -149361137 + CT-rich Low_complexity Low_complexity 2 77 0 4 716 550 295 35 72 chrX 17289588 17290154 -149360142 + L1MEg LINE L1 971 1515 -4727 4 716 580 324 85 53 chrX 17290177 17290519 -149359777 + MLT1A0 LTR MaLR 2 354 -11 4 716 343 298 68 81 chrX 17290623 17290930 -149359366 + L1MEg LINE L1 2370 2672 -3474 4 716 224 355 0 0 chrX 17290935 17290997 -149359299 + RSINE1 SINE B4 2 63 -102 4 716 362 250 10 61 chrX 17291090 17291188 -149359108 + RSINE1 SINE B4 73 165 0 4 716 180 0 0 0 chrX 17291194 17291214 -149359082 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 4 716 357 205 22 5 chrX 17291225 17291330 -149358966 + L1ME2 LINE L1 5860 5967 -197 4 716 238 231 62 0 chrX 17291366 17291431 -149358865 + L1ME2 LINE L1 6094 6162 -17 4 716 942 284 64 55 chrX 17291525 17291685 -149358611 - MER2 DNA MER2_type 0 345 188 4 716 879 261 89 92 chrX 17291685 17292043 -149358253 + ORR1E LTR MaLR 1 357 -2 4 716 942 284 64 55 chrX 17292043 17292210 -149358086 - MER2 DNA MER2_type -158 187 15 4 716 863 310 13 43 chrX 17292375 17292678 -149357618 + MLT2F LTR ERVL 368 661 -2 4 716 34 42 0 0 chrX 17292727 17292775 -149357521 + AT_rich Low_complexity Low_complexity 1 48 0 4 716 2259 163 63 67 chrX 17293049 17293650 -149356646 + RLTR31_Mm LTR ERVK 6 558 -26 4 716 337 195 51 25 chrX 17293662 17293741 -149356555 + RLTR17 LTR ERVK 612 692 0 4 716 521 183 66 8 chrX 17293741 17293862 -149356434 - ERVL-int LTR ERVL -379 5378 5251 4 716 769 274 150 4 chrX 17293918 17294171 -149356125 + MLT2F LTR ERVL 368 657 -6 4 716 446 313 67 7 chrX 17294355 17294776 -149355520 + L1MEg LINE L1 4258 4703 -1443 4 716 287 260 96 0 chrX 17294846 17294919 -149355377 + B3 SINE B2 4 83 -133 4 716 222 330 10 52 chrX 17294975 17295071 -149355225 + B3A SINE B2 87 178 -20 4 716 723 229 0 0 chrX 17295183 17295314 -149354982 + B1_Mur2 SINE Alu 12 142 -7 5 716 23 0 0 0 chrX 17295314 17295337 -149354959 + AT_rich Low_complexity Low_complexity 1 23 0 5 716 838 276 40 17 chrX 17295797 17296014 -149354282 + B4 SINE B4 64 284 -8 5 716 495 0 0 0 chrX 17296030 17296085 -149354211 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 716 1359 168 147 39 chrX 17296164 17296498 -149353798 + ORR1D1 LTR MaLR 1 370 -4 5 716 335 317 28 47 chrX 17296522 17296628 -149353668 + RSINE1 SINE B4 60 163 -2 5 716 318 50 0 0 chrX 17296652 17296692 -149353604 + (TAA)n Simple_repeat Simple_repeat 3 42 0 5 716 2953 115 34 36 chrX 17297652 17298128 -149352168 + MT2C_Mm LTR ERVL 1 475 0 5 716 1316 279 115 45 chrX 17298139 17298694 -149351602 - Tigger7 DNA MER2_type -1877 614 21 5 716 535 202 51 26 chrX 17298720 17298837 -149351459 + MLT1A0 LTR MaLR 5 124 -241 5 716 2914 178 93 109 chrX 17298845 17299762 -149350534 + RLTR13D6 LTR ERVK 1 902 0 5 716 286 295 0 0 chrX 17299893 17299971 -149350325 + MLT1A0 LTR MaLR 284 361 -13 5 716 504 0 0 0 chrX 17301405 17301461 -149348835 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 89 419 275 11 0 chrX 17301464 17301555 -149348741 + RSINE1 SINE B4 53 144 -21 5 717 2178 259 74 79 chrX 17302256 17302380 -149347916 + RMER17B LTR ERVK 1 135 -823 5 717 185 0 40 0 chrX 17302380 17302405 -149347891 + (CCCCCA)n Simple_repeat Simple_repeat 4 29 0 5 717 2178 268 69 78 chrX 17302405 17303302 -149346994 + RMER17B LTR ERVK 136 905 -53 5 717 670 278 20 50 chrX 17303379 17303580 -149346716 + B3A SINE B2 4 198 0 5 717 929 232 77 49 chrX 17303670 17303996 -149346300 + L1MB8 LINE L1 5797 6131 -47 5 717 293 162 34 101 chrX 17304289 17304378 -149345918 - ID4 SINE ID 0 83 1 5 717 429 20 0 0 chrX 17304731 17304781 -149345515 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 717 360 0 0 0 chrX 17304781 17304820 -149345476 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 717 3004 28 8 8 chrX 17305517 17305879 -149344417 - L1Md_F3 LINE L1 -14 6570 6209 5 717 234 51 51 0 chrX 17305879 17305918 -149344378 + L1_Mur2 LINE L1 2120 2160 -3717 5 717 462 187 22 0 chrX 17305932 17306023 -149344273 + PB1D10 SINE Alu 9 101 -16 5 717 696 94 0 0 chrX 17306028 17306134 -149344162 + (CA)n Simple_repeat Simple_repeat 1 106 0 5 717 817 218 118 134 chrX 17306815 17307180 -149343116 + MTE2a LTR MaLR 19 377 -2 5 717 1483 151 0 0 chrX 17307928 17308153 -149342143 - URR1B DNA MER1_type 0 225 1 5 717 7453 67 4 4 chrX 17308799 17310193 -149340103 + L1_Mus2 LINE L1 5172 6565 -1 5 717 33 43 0 0 chrX 17310434 17310481 -149339815 + AT_rich Low_complexity Low_complexity 1 47 0 5 717 725 291 78 16 chrX 17310602 17310857 -149339439 - B4A SINE B4 -18 274 4 5 717 840 144 65 0 chrX 17311098 17311237 -149339059 + B1_Mus1 SINE Alu 1 148 0 5 717 465 90 0 0 chrX 17311249 17311316 -149338980 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 5 717 1735 189 45 60 chrX 17312255 17312637 -149337659 + ORR1C2 LTR MaLR 5 380 -4 5 717 968 193 18 26 chrX 17312836 17313028 -149337268 + MTC LTR MaLR 2 191 -230 5 717 1251 141 5 0 chrX 17313028 17313212 -149337084 + B2_Mm2 SINE B2 1 185 -10 5 717 925 186 73 0 chrX 17313283 17313460 -149336836 + MTC LTR MaLR 196 385 -36 5 717 640 266 59 16 chrX 17314443 17314630 -149335666 + B3A SINE B2 1 195 -3 5 717 327 315 13 5 chrX 17316766 17316953 -149333343 - MER52-int LTR ERV1 -5277 1814 1696 5 717 461 318 23 23 chrX 17317297 17317429 -149332867 + RSINE1 SINE B4 5 136 -29 5 717 805 245 358 18 chrX 17317460 17317693 -149332603 + L1M2 LINE L1 5157 5455 -845 5 717 2083 117 15 15 chrX 17317693 17318022 -149332274 + ORR1A4 LTR MaLR 1 329 0 5 717 805 232 84 32 chrX 17318022 17318170 -149332126 + L1M2 LINE L1 5456 5625 -675 5 717 1218 213 175 0 chrX 17318195 17318510 -149331786 - ORR1D2 LTR MaLR 0 370 1 5 717 1201 269 53 48 chrX 17318568 17318943 -149331353 - MTE2b LTR MaLR 0 379 3 5 717 397 141 0 0 chrX 17319055 17319126 -149331170 + RMER4B LTR ERVK 1 71 -514 5 717 2184 141 35 19 chrX 17319122 17319491 -149330805 + RMER4B LTR ERVK 211 585 0 5 717 237 370 38 38 chrX 17319629 17319761 -149330535 + MER5B DNA MER1_type 43 174 -4 5 717 1627 151 111 50 chrX 17319803 17320144 -149330152 - MTB_Mm LTR MaLR -43 364 3 5 717 581 207 107 0 chrX 17320760 17320881 -149329415 + B1F1 SINE Alu 1 134 -15 5 717 26 30 0 0 chrX 17321074 17321107 -149329189 + AT_rich Low_complexity Low_complexity 1 33 0 5 717 218 116 0 23 chrX 17321146 17321190 -149329106 + (CAGA)n Simple_repeat Simple_repeat 4 46 0 5 717 728 298 6 0 chrX 17321197 17321358 -149328938 - B3A SINE B2 -36 162 1 5 717 36 40 0 0 chrX 17321526 17321576 -149328720 + AT_rich Low_complexity Low_complexity 1 50 0 5 717 3220 26 8 0 chrX 17321579 17321956 -149328340 - L1Md_F2 LINE L1 -2 6580 6201 5 717 4878 101 5 1 chrX 17322219 17323233 -149327063 + L1VL4 LINE L1 601 1619 -1940 5 717 12938 105 15 17 chrX 17323229 17323866 -149326430 + L1_Mus3 LINE L1 3821 4456 -1427 5 717 1260 41 0 0 chrX 17323866 17324013 -149326283 + B1_Mm SINE Alu 1 147 0 5 717 12938 95 20 9 chrX 17324013 17326164 -149324132 + L1_Mus3 LINE L1 4457 6630 -8 5 717 285 315 31 64 chrX 17326386 17326671 -149323625 - MER2 DNA MER2_type -71 274 2 5 717 322 246 75 118 chrX 17326746 17326914 -149323382 - MIRb SINE MIR -89 179 1 5 717 349 317 69 75 chrX 17327138 17327533 -149322763 + MLT1G1 LTR MaLR 33 555 -24 5 717 432 117 0 0 chrX 17327795 17327872 -149322424 + (CAAAC)n Simple_repeat Simple_repeat 3 79 0 5 717 398 312 56 20 chrX 17328141 17328337 -149321959 + RMER15 LTR ERVL 336 538 -37 5 717 5572 89 82 11 chrX 17328457 17329299 -149320997 - RLTR13D6 LTR ERVK 0 902 1 5 717 298 292 71 121 chrX 17329386 17329687 -149320609 - ORR1C2 LTR MaLR -11 359 78 5 717 255 31 0 0 chrX 17330205 17330237 -149320059 + (T)n Simple_repeat Simple_repeat 1 32 0 5 717 232 354 101 0 chrX 17330912 17331011 -149319285 - ORR1C2 LTR MaLR -249 110 2 5 717 423 312 57 63 chrX 17331020 17331369 -149318927 - L1MC4 LINE L1 -241 7801 7455 5 717 456 19 0 0 chrX 17331385 17331438 -149318858 + (TTCC)n Simple_repeat Simple_repeat 4 56 0 5 717 1250 69 12 0 chrX 17331438 17331610 -149318686 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 5 717 972 122 7 0 chrX 17331612 17331751 -149318545 - B1_Mur4 SINE Alu -6 144 5 5 717 652 289 60 83 chrX 17332300 17332601 -149317695 + B4 SINE B4 9 290 -2 5 717 362 289 114 31 chrX 17332606 17332799 -149317497 + L1MC4a LINE L1 5399 5607 -2275 5 717 1180 265 90 35 chrX 17332810 17333244 -149317052 + Lx8 LINE L1 7011 7468 -5 5 717 27 0 0 0 chrX 17333252 17333279 -149317017 + AT_rich Low_complexity Low_complexity 1 27 0 5 717 267 134 44 15 chrX 17333587 17333655 -149316641 + GA-rich Low_complexity Low_complexity 1 70 0 5 717 236 231 63 55 chrX 17333719 17333828 -149316468 + MLT1B LTR MaLR 282 396 -12 5 717 342 282 77 5 chrX 17333838 17334045 -149316251 + L1MC4a LINE L1 5659 5880 -2002 5 717 252 239 132 15 chrX 17334142 17334210 -149316086 - ID2 SINE ID -2 81 6 5 717 1820 195 80 11 chrX 17334219 17334593 -149315703 - MTD LTR MaLR -2 417 18 5 717 1131 81 0 13 chrX 17334763 17334913 -149315383 + B1_Mus1 SINE Alu 1 148 0 5 717 598 237 44 7 chrX 17334970 17335106 -149315190 + B1_Mus1 SINE Alu 2 142 -6 5 717 630 122 0 0 chrX 17335115 17335213 -149315083 + (GGGA)n Simple_repeat Simple_repeat 4 101 0 5 717 211 222 0 22 chrX 17335214 17335260 -149315036 - B1F SINE Alu -12 137 93 5 717 201 121 0 0 chrX 17335604 17335637 -149314659 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 5 717 367 339 98 86 chrX 17335815 17336151 -149314145 + LTR16A1 LTR ERVL 90 429 -27 5 717 219 69 0 0 chrX 17336389 17336418 -149313878 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 717 657 313 10 35 chrX 17336424 17336626 -149313670 - B3A SINE B2 0 198 2 5 717 1405 244 73 31 chrX 17336654 17337039 -149313257 + MTD LTR MaLR 5 405 -14 5 717 251 83 0 40 chrX 17337422 17337441 -149312855 + (TTTTTG)n Simple_repeat Simple_repeat 6 24 0 5 717 1174 68 0 0 chrX 17337441 17337587 -149312709 - B1_Mm SINE Alu 0 147 2 5 717 251 83 0 40 chrX 17337587 17337617 -149312679 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 5 717 634 284 40 0 chrX 17337797 17337945 -149312351 - RSINE1 SINE B4 0 165 12 5 717 534 286 11 40 chrX 17337973 17338148 -149312148 + MER58B DNA MER1_type 115 284 -57 5 717 876 248 130 59 chrX 17338164 17338502 -149311794 - MTEa LTR MaLR -13 366 5 5 717 422 359 63 65 chrX 17338519 17338934 -149311362 + MLT1D LTR MaLR 37 484 -143 5 717 1095 129 0 8 chrX 17339204 17339453 -149310843 + (GAAA)n Simple_repeat Simple_repeat 1 247 0 5 717 352 259 24 24 chrX 17340426 17340509 -149309787 + ID4_ SINE ID 1 83 0 5 717 450 311 74 108 chrX 17340541 17341002 -149309294 + LTR37B LTR ERV1 6 450 -18 5 717 2950 108 13 23 chrX 17341368 17341844 -149308452 - RLTR31B_Mm LTR ERVK -86 471 1 5 717 801 58 0 0 chrX 17341904 17342007 -149308289 + (GGGA)n Simple_repeat Simple_repeat 2 104 0 5 717 268 338 112 60 chrX 17342156 17342389 -149307907 - RMER15 LTR ERVL -18 557 313 5 717 248 289 41 66 chrX 17342411 17342533 -149307763 - Lx8 LINE L1 -297 7176 7058 5 717 246 293 0 51 chrX 17342798 17342877 -149307419 - MLT1E3 LTR MaLR -19 605 531 5 717 327 345 133 25 chrX 17343062 17343258 -149307038 + LTR33 LTR ERVL 1 217 -298 5 717 1246 242 99 23 chrX 17343451 17343533 -149306763 + LTR37B LTR ERV1 1 84 -384 5 717 4224 25 2 2 chrX 17343533 17344015 -149306281 - LTRIS_Mm LTR ERV1 0 482 1 5 717 1246 242 99 23 chrX 17344015 17344367 -149305929 + LTR37B LTR ERV1 85 467 -1 5 717 21 89 0 0 chrX 17344377 17344433 -149305863 + AT_rich Low_complexity Low_complexity 1 56 0 6 717 716 200 41 155 chrX 17344433 17344526 -149305770 + RMER15 LTR ERVL 382 461 -114 6 717 1389 64 26 11 chrX 17344526 17344716 -149305580 + B2_Mm1t SINE B2 1 193 0 6 717 716 200 41 155 chrX 17344716 17344841 -149305455 + RMER15 LTR ERVL 462 575 0 6 717 752 193 14 150 chrX 17344842 17345049 -149305247 - Lx8 LINE L1 -954 6519 6341 5 717 21 36 0 0 chrX 17345133 17345161 -149305135 + AT_rich Low_complexity Low_complexity 1 28 0 6 717 189 0 0 0 chrX 17345254 17345275 -149305021 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 6 717 1013 110 0 0 chrX 17345275 17345411 -149304885 - B1_Mus1 SINE Alu -10 138 3 6 717 556 244 0 68 chrX 17345419 17345551 -149304745 - ID_B1 SINE B4 -8 216 94 6 717 305 311 25 30 chrX 17345658 17345857 -149304439 - L1MEg LINE L1 -5373 711 514 6 717 3302 100 99 21 chrX 17346400 17346923 -149303373 - LTRIS2 LTR ERV1 0 564 1 6 717 25 0 0 0 chrX 17347058 17347083 -149303213 + AT_rich Low_complexity Low_complexity 1 25 0 6 717 735 342 9 44 chrX 17347342 17347433 -149302863 + B4A SINE B4 1 88 -204 6 717 5110 112 58 23 chrX 17347433 17348290 -149302006 - RMER17D LTR ERVK -2 887 1 6 717 735 342 9 44 chrX 17348290 17348424 -149301872 + B4A SINE B4 89 218 -74 6 717 259 197 15 15 chrX 17349284 17349351 -149300945 - L1M4 LINE L1 -3662 2982 2916 6 717 1183 253 117 3 chrX 17349434 17349810 -149300486 + Lx8 LINE L1 7039 7457 -16 6 717 21 36 0 0 chrX 17349815 17349843 -149300453 + AT_rich Low_complexity Low_complexity 1 28 0 6 717 625 296 21 43 chrX 17349850 17350037 -149300259 + B3A SINE B2 1 183 -15 6 717 338 328 76 45 chrX 17350067 17350265 -149300031 - L1M4 LINE L1 -3777 2867 2664 6 717 2035 152 60 30 chrX 17350265 17350632 -149299664 - ORR1C1 LTR MaLR 0 378 1 6 717 359 269 128 6 chrX 17350817 17350989 -149299307 - L1M4 LINE L1 -6333 209 17 6 717 570 297 88 5 chrX 17351349 17351539 -149298757 - MLT1E2 LTR MaLR 0 627 422 6 717 236 329 0 37 chrX 17351539 17351621 -149298675 + ID4_ SINE ID 4 82 -1 6 717 759 271 44 57 chrX 17351686 17351913 -149298383 + B4 SINE B4 69 292 0 6 717 297 89 0 0 chrX 17351965 17352010 -149298286 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 717 180 0 0 0 chrX 17352010 17352030 -149298266 + (TGAG)n Simple_repeat Simple_repeat 2 21 0 6 717 475 301 119 0 chrX 17352142 17352285 -149298011 - RSINE1 SINE B4 -2 163 4 6 717 2311 110 62 114 chrX 17352299 17352800 -149297496 - IAPLTR2_Mm LTR ERVK 0 475 1 6 717 471 271 17 8 chrX 17352803 17352922 -149297374 - Lx8 LINE L1 -206 7267 7148 6 717 1813 245 99 4 chrX 17352922 17353439 -149296857 - Lx8 LINE L1 -270 7203 6638 6 717 2791 108 7 5 chrX 17353439 17353847 -149296449 - RLTR9E LTR ERVK 0 409 1 6 717 507 104 0 0 chrX 17353847 17353924 -149296372 - ETnERV2-int LTR ERVK 0 7406 7330 6 717 1151 147 20 5 chrX 17354140 17354338 -149295958 - ETnERV2-int LTR ERVK -984 6422 6222 6 717 15470 193 25 17 chrX 17354386 17358386 -149291910 - ETnERV2-int LTR ERVK -1179 6227 1430 6 717 1845 106 31 22 chrX 17358386 17358705 -149291591 + RLTRETN_Mm LTR ERVK 1 322 0 6 717 17451 160 26 20 chrX 17358705 17365468 -149284828 + ETnERV2-int LTR ERVK 1 7201 -205 6 717 1856 102 31 22 chrX 17365470 17365789 -149284507 + RLTRETN_Mm LTR ERVK 1 322 0 6 717 5388 209 7 6 chrX 17365789 17366868 -149283428 - ETnERV2-int LTR ERVK -1770 1544 464 6 717 795 226 69 51 chrX 17366873 17367148 -149283148 - ETnERV2-int LTR ERVK -3033 281 2 6 717 2529 98 25 98 chrX 17367149 17367590 -149282706 - RLTR9E LTR ERVK 0 409 1 6 717 1203 247 172 52 chrX 17367590 17368073 -149282223 - Lx8 LINE L1 -830 6643 6103 6 717 3030 24 5 0 chrX 17369089 17369535 -149280761 - L1Md_F2 LINE L1 -632 5950 5495 6 717 6231 67 38 0 chrX 17369535 17370401 -149279895 + L1Md_F2 LINE L1 4597 5495 -388 6 717 246 32 0 0 chrX 17370448 17370479 -149279817 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 717 225 0 0 0 chrX 17370479 17370503 -149279793 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 717 846 225 53 20 chrX 17370547 17370764 -149279532 + ORR1B2 LTR MaLR 1 247 -112 6 717 1496 148 10 209 chrX 17371317 17371805 -149278491 + RMER17C LTR ERVK 1 391 -19 6 717 401 305 17 0 chrX 17372112 17372230 -149278066 + MER58B DNA MER1_type 203 322 -19 6 717 813 249 81 64 chrX 17372311 17372594 -149277702 - B4 SINE B4 -4 288 1 6 717 474 57 0 0 chrX 17372632 17372702 -149277594 + L1_Mus3 LINE L1 6565 6634 -4 6 717 21 57 0 0 chrX 17372901 17372936 -149277360 + AT_rich Low_complexity Low_complexity 1 35 0 6 717 2666 45 42 3 chrX 17373379 17373712 -149276584 + ORR1A1 LTR MaLR 1 346 0 6 717 276 313 18 24 chrX 17373831 17374001 -149276295 + L1M5 LINE L1 3615 3783 -2363 6 717 391 266 169 9 chrX 17374033 17374188 -149276108 + MIR SINE MIR 19 184 -84 6 717 226 317 128 10 chrX 17374586 17374688 -149275608 - MT2B LTR ERVL -360 241 128 6 717 334 314 19 0 chrX 17374693 17374798 -149275498 + MIR SINE MIR 121 227 -35 6 717 1744 213 21 37 chrX 17374798 17375174 -149275122 - ORR1D1 LTR MaLR 0 374 5 6 717 655 301 100 42 chrX 17375305 17375565 -149274731 + B4A SINE B4 18 292 0 6 717 517 319 12 29 chrX 17375847 17376018 -149274278 + MER44B DNA MER2_type 188 355 -195 6 717 765 279 9 10 chrX 17376075 17376252 -149274044 + B3 SINE B2 28 204 -12 6 717 423 0 0 0 chrX 17376338 17376385 -149273911 + (TA)n Simple_repeat Simple_repeat 2 48 0 6 717 1574 154 88 20 chrX 17376456 17376761 -149273535 + ORR1A3 LTR MaLR 1 326 0 6 717 1148 267 123 34 chrX 17376915 17377272 -149273024 - MTD LTR MaLR -14 405 17 6 717 1204 240 64 21 chrX 17377249 17377530 -149272766 + ORR1D2 LTR MaLR 78 370 0 6 717 401 317 126 55 chrX 17377587 17377841 -149272455 - MLT1G LTR MaLR -309 282 11 6 717 278 286 121 60 chrX 17377845 17378027 -149272269 - B3A SINE B2 -5 193 1 6 717 1444 218 95 48 chrX 17378170 17378364 -149271932 - MTD LTR MaLR 0 419 209 6 717 1134 107 0 0 chrX 17378364 17378532 -149271764 + (TTCTC)n Simple_repeat Simple_repeat 4 171 0 6 717 1315 77 0 27 chrX 17378537 17378723 -149271573 - B2_Mm2 SINE B2 -14 181 1 6 717 1444 218 95 48 chrX 17378723 17378922 -149271374 - MTD LTR MaLR -211 208 1 6 717 457 282 49 14 chrX 17379337 17379481 -149270815 - MTEa LTR MaLR -3 376 228 6 717 296 281 55 47 chrX 17379535 17379662 -149270634 - MTEa LTR MaLR -159 200 73 6 717 563 196 0 9 chrX 17379692 17379800 -149270496 + MTC LTR MaLR 1 107 -314 6 717 239 154 19 0 chrX 17379828 17379880 -149270416 - Lx5 LINE L1 0 7050 6998 6 717 1943 119 88 12 chrX 17379889 17380229 -149270067 - RLTR9A LTR ERVK -2 366 1 6 717 294 183 27 27 chrX 17380232 17380305 -149269991 - ETnERV2-int LTR ERVK -2 7404 7332 6 717 273 207 33 33 chrX 17380514 17380604 -149269692 - ETnERV2-int LTR ERVK -981 6425 6336 6 717 11223 193 11 14 chrX 17380764 17383049 -149267247 - ETnERV2-int LTR ERVK -1195 6211 2491 6 717 2332 115 5 42 chrX 17383050 17383451 -149266845 + L1_Mm LINE L1 4463 4848 -1035 6 717 1106 65 0 7 chrX 17383476 17383630 -149266666 - L1_Mus2 LINE L1 -297 6269 6117 6 717 363 18 0 0 chrX 17383630 17383687 -149266609 + L1_Mus4 LINE L1 6579 6635 -1 6 717 4224 306 30 25 chrX 17383692 17386198 -149264098 - ETnERV2-int LTR ERVK -3707 2460 4 6 717 1932 121 76 6 chrX 17386201 17386542 -149263754 - RLTR9A LTR ERVK -1 367 3 6 717 999 253 87 7 chrX 17386543 17386830 -149263466 - Lx5 LINE L1 -58 6992 6683 6 717 7055 103 3 25 chrX 17386836 17388029 -149262267 + Lx LINE L1 5484 6647 -7 6 717 819 168 366 0 chrX 17388073 17388263 -149262033 + MTC LTR MaLR 152 411 -8 6 717 842 222 104 22 chrX 17388946 17389176 -149261120 + Lx8 LINE L1 7186 7434 -39 6 717 1209 197 14 0 chrX 17389897 17390120 -149260176 + URR1A DNA MER1_type 1 226 0 6 717 228 204 36 18 chrX 17390936 17390991 -149259305 + RMER6B LTR ERVK 368 423 -38 6 717 304 162 128 54 chrX 17391246 17391350 -149258946 - MER57-int LTR ERV1 -279 7258 7159 6 717 22 0 0 0 chrX 17391406 17391428 -149258868 + AT_rich Low_complexity Low_complexity 1 22 0 6 717 351 0 0 0 chrX 17391521 17391560 -149258736 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 717 1351 314 24 16 chrX 17391592 17392016 -149258280 + Lx8 LINE L1 6221 6647 -826 6 717 8857 95 20 1 chrX 17392007 17394055 -149256241 + L1VL4 LINE L1 1 2090 -1469 6 717 3600 147 7 0 chrX 17394054 17394611 -149255685 + L1_Mm LINE L1 5314 5874 -9 6 717 545 246 18 0 chrX 17394612 17394726 -149255570 + Lx8 LINE L1 7177 7292 -181 6 717 2021 140 69 50 chrX 17394727 17395103 -149255193 - RLTR9A2 LTR ERVK 0 383 1 6 717 386 143 37 49 chrX 17395103 17395184 -149255112 - ETnERV2-int LTR ERVK 0 7406 7327 6 717 785 92 7 39 chrX 17395258 17395384 -149254912 - B1_Mus2 SINE Alu -2 145 15 6 717 279 213 153 41 chrX 17395305 17395403 -149254893 - RLTR25B LTR ERVK -530 498 390 6 717 12455 201 62 91 chrX 17395488 17396277 -149254019 - ETnERV2-int LTR ERVK -1230 4176 2836 6 717 5921 110 64 13 chrX 17396277 17397139 -149253157 + RMER17A2 LTR ERVK 1 906 0 6 717 15697 158 54 56 chrX 17397139 17398061 -149252235 - ETnERV2-int LTR ERVK -3312 4094 2874 6 717 5149 152 94 6 chrX 17398061 17398941 -149251355 + RMER17B LTR ERVK 1 958 0 6 717 15697 151 32 62 chrX 17398941 17398952 -149251344 - ETnERV2-int LTR ERVK -3475 3931 3925 6 717 501 17 0 0 chrX 17398952 17399010 -149251286 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 6 717 15697 151 32 62 chrX 17399010 17401940 -149248356 - ETnERV2-int LTR ERVK -3482 3924 1077 6 717 335 277 84 87 chrX 17402023 17402332 -149247964 - ETnERV2-int LTR ERVK -2991 323 16 6 717 2230 127 82 6 chrX 17402348 17402704 -149247592 - RLTR9A2 LTR ERVK 0 383 1 6 717 417 211 150 39 chrX 17402717 17402870 -149247426 + Lx8 LINE L1 7302 7471 -2 6 717 1169 291 38 35 chrX 17402885 17403224 -149247072 - MLT2B2 LTR ERVL -175 340 1 6 717 2565 196 38 41 chrX 17403311 17403869 -149246427 + RLTR1D LTR ERV1 50 605 0 6 717 304 236 0 0 chrX 17404161 17404216 -149246080 - Lx8 LINE L1 -708 6765 6711 6 717 10540 257 72 28 chrX 17404849 17407129 -149243167 + MYSERV6-int LTR ERVK 310 2687 -6272 6 717 198 0 0 0 chrX 17407129 17407151 -149243145 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 6 717 10540 257 72 28 chrX 17407151 17407984 -149242312 + MYSERV6-int LTR ERVK 2688 3558 -5401 6 717 1231 147 0 0 chrX 17407985 17408169 -149242127 + MYSERV6-int LTR ERVK 3714 3897 -5062 6 717 824 271 48 62 chrX 17408169 17408523 -149241773 + RLTR10D LTR ERVK 1 349 -10 6 717 534 196 18 0 chrX 17408547 17408659 -149241637 + IAP-d-int LTR ERVK 22 135 -6407 6 717 354 189 14 0 chrX 17408655 17408729 -149241567 + IAP-d-int LTR ERVK 67 141 -6401 6 717 7809 280 23 31 chrX 17408754 17411405 -149238891 + IAP-d-int LTR ERVK 3170 5800 -742 6 717 1578 200 26 17 chrX 17411424 17411946 -149238350 + IAP-d-int LTR ERVK 5911 6542 0 6 717 909 281 50 45 chrX 17411946 17412303 -149237993 + RLTR10D LTR ERVK 1 359 0 6 717 3196 236 47 14 chrX 17412304 17413271 -149237025 + MYSERV6-int LTR ERVK 3676 4626 -1924 6 717 225 204 0 0 chrX 17413405 17413449 -149236847 - L1VL2 LINE L1 -5810 525 482 6 717 643 289 62 73 chrX 17413449 17413819 -149236477 + MYSERV6-int LTR ERVK 543 908 -1418 6 717 295 250 81 65 chrX 17413819 17413943 -149236353 + RMER4A LTR ERVK 297 422 -44 6 717 192 25 73 24 chrX 17413994 17414035 -149236261 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 717 293 153 0 48 chrX 17414035 17414097 -149236199 - B1_Mm SINE Alu 0 147 89 6 717 845 111 30 0 chrX 17414097 17414232 -149236064 + MYSERV6-int LTR ERVK 1092 1230 -1096 6 717 24152 105 33 4 chrX 17414232 17419261 -149231035 - L1Md_F2 LINE L1 0 6582 1140 6 717 4937 147 21 15 chrX 17419237 17420201 -149230095 - L1Md_F2 LINE L1 -5519 1205 244 6 717 4614 172 80 7 chrX 17420203 17421192 -149229104 + MYSERV16_I-int LTR ERVK 1221 2281 -45 6 717 1921 189 80 0 chrX 17421235 17421647 -149228649 + BGLII_A LTR ERVK 1 445 0 6 717 1641 122 8 0 chrX 17421752 17421997 -149228299 + ORR1A2 LTR MaLR 81 327 0 6 717 646 244 34 29 chrX 17422015 17422192 -149228104 - MTD LTR MaLR 0 419 210 6 717 373 348 70 37 chrX 17422221 17422463 -149227833 - MTD LTR MaLR -161 258 9 6 717 506 269 140 89 chrX 17422588 17422902 -149227394 + ORR1E LTR MaLR 19 348 -11 6 717 273 57 0 0 chrX 17422980 17423015 -149227281 + (A)n Simple_repeat Simple_repeat 1 35 0 6 717 906 276 73 32 chrX 17423760 17424154 -149226142 - L1MC4 LINE L1 -155 7727 7327 6 717 31 0 0 0 chrX 17425659 17425690 -149224606 + AT_rich Low_complexity Low_complexity 1 31 0 6 717 1267 304 66 11 chrX 17426448 17426890 -149223406 + Lx8 LINE L1 6850 7315 -158 6 717 360 231 0 32 chrX 17426904 17426998 -149223298 + Lx8 LINE L1 7381 7471 -2 6 717 8760 58 2 1 chrX 17427268 17428349 -149221947 + L1Md_F3 LINE L1 4505 5586 -297 6 717 8745 36 0 12 chrX 17428349 17428401 -149221895 + L1Md_F3 LINE L1 5587 5638 -946 6 717 3207 50 13 5 chrX 17428401 17428786 -149221510 + RLTR10 LTR ERVK 1 388 -2 7 717 8745 36 0 12 chrX 17428786 17429741 -149220555 + L1Md_F3 LINE L1 5639 6582 -2 6 717 561 153 106 78 chrX 17429746 17429888 -149220408 - RMER10A LTR ERVL -1 441 296 7 717 3687 79 32 2 chrX 17429888 17430356 -149219940 + RLTR45 LTR ERVK 1 482 0 7 717 3756 66 63 18 chrX 17430356 17430992 -149219304 + RLTR45-int LTR ERVK 1 692 -6552 7 717 1145 51 0 0 chrX 17431290 17431428 -149218868 + RLTR45-int LTR ERVK 681 818 -6426 7 89 8412 22 3 0 chrX 17431725 17433155 -149217141 - L1Md_Gf LINE L1 -5569 953 1 7 718 798 11 0 0 chrX 17433570 17433661 -149216635 + (TTC)n Simple_repeat Simple_repeat 2 92 0 7 718 1199 49 14 0 chrX 17433663 17433805 -149216491 - B1_Mm SINE Alu -3 144 1 7 718 496 238 44 44 chrX 17434034 17434192 -149216104 - MMERGLN-int LTR ERV1 -6885 671 514 7 718 1933 122 157 0 chrX 17434642 17435012 -149215284 - RLTR47_MM LTR ERV1 0 532 105 7 718 3855 56 2 0 chrX 17435012 17435479 -149214817 - L1Md_F2 LINE L1 -245 6337 5870 7 718 291 23 0 0 chrX 17435477 17435520 -149214776 + L1Md_T LINE L1 6540 6582 0 7 718 3163 122 39 0 chrX 17435539 17436023 -149214273 + L1_Mm LINE L1 4252 4754 -1129 7 718 4589 87 42 2 chrX 17436023 17436624 -149213672 + L1_Mus2 LINE L1 5938 6562 -4 7 718 606 101 101 0 chrX 17436636 17436745 -149213551 - RLTR47_MM LTR ERV1 -412 120 1 7 718 695 95 9 0 chrX 17437036 17437141 -149213155 + (GAAA)n Simple_repeat Simple_repeat 1 106 0 7 718 421 244 84 66 chrX 17437243 17437410 -149212886 + L1M4b LINE L1 1107 1276 -6058 7 718 586 251 61 16 chrX 17437515 17437724 -149212572 + L1M4b LINE L1 2278 2492 -4701 7 718 261 289 130 75 chrX 17437940 17438086 -149212210 + B4A SINE B4 2 155 -137 7 718 743 256 125 5 chrX 17438073 17438289 -149212007 + ORR1D2 LTR MaLR 129 370 0 7 718 396 0 0 0 chrX 17438298 17438342 -149211954 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 7 718 1489 252 31 6 chrX 17438346 17438673 -149211623 - MTD LTR MaLR -80 339 5 7 718 246 105 0 0 chrX 17439060 17439098 -149211198 + (TAGA)n Simple_repeat Simple_repeat 4 41 0 7 718 279 268 49 37 chrX 17439414 17439577 -149210719 + L1M4b LINE L1 2719 2883 -4451 7 718 492 68 0 0 chrX 17439908 17439981 -149210315 + (A)n Simple_repeat Simple_repeat 1 73 0 7 718 320 137 0 0 chrX 17440779 17440830 -149209466 + L1_Mur2 LINE L1 3275 3325 -2552 7 718 3893 222 33 22 chrX 17440824 17442099 -149208197 + Lx5 LINE L1 5340 6598 -460 7 718 490 259 37 79 chrX 17442133 17442322 -149207974 + Lx5 LINE L1 6866 7046 -4 7 718 333 68 0 0 chrX 17442322 17442366 -149207930 + (GA)n Simple_repeat Simple_repeat 1 44 0 7 718 398 213 20 41 chrX 17442366 17442611 -149207685 - RMER17D LTR ERVK -416 473 234 7 718 4268 200 91 35 chrX 17442635 17443475 -149206821 + RMER1B Other Other 47 934 -132 7 718 351 0 0 0 chrX 17443475 17443514 -149206782 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 718 4268 200 91 35 chrX 17443514 17443631 -149206665 + RMER1B Other Other 935 1056 -10 7 718 1133 224 86 11 chrX 17443647 17443914 -149206382 + Lx8 LINE L1 6336 6622 -851 7 718 700 224 0 0 chrX 17443916 17444041 -149206255 + Lx8 LINE L1 6552 6676 -797 7 718 340 243 27 0 chrX 17444048 17444114 -149206182 + RSINE1 SINE B4 66 133 -32 7 718 5618 112 8 98 chrX 17444114 17445182 -149205114 - RLTR13D5 LTR ERVK 0 1023 52 7 718 8717 111 13 2 chrX 17445307 17447403 -149202893 - L1_Mus3 LINE L1 -12 6626 4503 7 718 5586 129 8 45 chrX 17447400 17448839 -149201457 - L1VL4 LINE L1 -1823 1736 157 7 718 266 284 104 52 chrX 17449078 17449212 -149201084 + L1M4b LINE L1 3385 3525 -3809 7 718 2042 146 35 0 chrX 17449811 17450127 -149200169 - ORR1A2 LTR MaLR 0 327 1 7 718 467 139 0 0 chrX 17450127 17450199 -149200097 - ORR1A2-int LTR MaLR 0 1963 1892 7 718 7503 162 80 11 chrX 17450303 17451926 -149198370 - ORR1A2-int LTR MaLR -74 1718 3 7 718 2181 137 3 9 chrX 17451928 17452253 -149198043 - ORR1A2 LTR MaLR -4 323 1 7 718 1416 184 137 21 chrX 17452521 17452819 -149197477 + BGLII_B LTR ERVK 1 329 -112 7 718 282 29 0 0 chrX 17452819 17452854 -149197442 + (TAGTG)n Simple_repeat Simple_repeat 1 35 0 7 718 1416 242 76 77 chrX 17452854 17453077 -149197219 + BGLII_B LTR ERVK 229 432 -9 7 718 525 44 0 0 chrX 17454675 17454743 -149195553 + (TC)n Simple_repeat Simple_repeat 2 69 0 7 718 205 197 16 16 chrX 17454807 17454869 -149195427 + CT-rich Low_complexity Low_complexity 1 62 0 7 718 4275 137 23 49 chrX 17454891 17455722 -149194574 - RMER17D2 LTR ERVK 0 809 1 7 718 1335 183 92 24 chrX 17455776 17456112 -149194184 - ORR1B2 LTR MaLR -8 359 1 7 718 345 291 32 19 chrX 17456132 17456286 -149194010 + CT-rich Low_complexity Low_complexity 1 156 0 7 718 503 142 4 4 chrX 17456358 17456466 -149193830 - B1_Mur4 SINE Alu 0 150 40 7 718 435 302 19 37 chrX 17456488 17456951 -149193345 + CT-rich Low_complexity Low_complexity 1 454 0 7 718 457 296 5 32 chrX 17456966 17457353 -149192943 + CT-rich Low_complexity Low_complexity 1 376 0 7 718 22 56 0 0 chrX 17457407 17457443 -149192853 + AT_rich Low_complexity Low_complexity 1 36 0 7 718 725 112 0 77 chrX 17462722 17462832 -149187464 + polypyrimidine Low_complexity Low_complexity 75 180 0 7 718 1167 88 0 0 chrX 17462832 17463002 -149187294 + (TCTCC)n Simple_repeat Simple_repeat 2 171 0 7 718 725 112 0 77 chrX 17463002 17463021 -149187275 + polypyrimidine Low_complexity Low_complexity 60 74 0 7 718 1014 92 17 22 chrX 17463021 17463199 -149187097 + (TTTCC)n Simple_repeat Simple_repeat 2 178 0 7 718 725 112 0 77 chrX 17463199 17463219 -149187077 + polypyrimidine Low_complexity Low_complexity 42 59 0 7 718 1140 70 0 27 chrX 17463219 17463442 -149186854 + (TTTCC)n Simple_repeat Simple_repeat 1 217 0 7 718 725 112 0 77 chrX 17463442 17463483 -149186813 + polypyrimidine Low_complexity Low_complexity 4 41 0 7 718 543 125 21 14 chrX 17463484 17463633 -149186663 + CT-rich Low_complexity Low_complexity 1 150 0 7 718 250 224 30 0 chrX 17463642 17463709 -149186587 + T-rich Low_complexity Low_complexity 3 71 0 7 718 329 239 98 25 chrX 17464099 17464262 -149186034 + L1M4b LINE L1 3530 3704 -3630 7 718 411 250 88 12 chrX 17464234 17464404 -149185892 + L1M4b LINE L1 3243 3425 -3581 7 718 1807 197 24 11 chrX 17464404 17464784 -149185512 + ORR1B1 LTR MaLR 2 386 -8 7 718 620 217 133 36 chrX 17464784 17465009 -149185287 + L1M4b LINE L1 3429 3675 -3331 7 718 21 36 0 0 chrX 17465018 17465046 -149185250 + AT_rich Low_complexity Low_complexity 1 28 0 7 718 210 279 0 16 chrX 17465095 17465157 -149185139 + PB1D10 SINE Alu 11 71 -46 7 718 239 93 23 0 chrX 17465266 17465309 -149184987 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 7 718 1041 121 0 0 chrX 17465544 17465709 -149184587 + (GAA)n Simple_repeat Simple_repeat 2 166 0 7 718 442 227 199 13 chrX 17465797 17466005 -149184291 - ORR1C1 LTR MaLR -104 274 9 7 718 250 260 0 40 chrX 17466100 17466176 -149184120 + RLTR42-int LTR ERVK 796 868 -4654 7 718 7920 169 70 58 chrX 17466227 17467799 -149182497 + RLTR42-int LTR ERVK 956 2556 -2966 7 718 468 0 0 0 chrX 17467799 17467851 -149182445 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 7 718 7920 169 70 58 chrX 17467851 17467996 -149182300 + RLTR42-int LTR ERVK 2557 2693 -2829 7 718 732 122 184 7 chrX 17467994 17468135 -149182161 + RLTR42-int LTR ERVK 3101 3266 -2256 7 718 687 261 86 68 chrX 17468331 17468725 -149181571 - RMER13A LTR ERVK -71 556 100 7 718 3298 133 36 42 chrX 17468835 17469476 -149180820 + RLTR42-int LTR ERVK 3263 3899 -1623 7 718 27688 128 7 4 chrX 17469526 17472596 -149177700 - L1_Mus2 LINE L1 -1 6565 3486 7 718 207 0 0 0 chrX 17472596 17472619 -149177677 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 718 27688 145 9 4 chrX 17472619 17474015 -149176281 - L1_Mus2 LINE L1 -2398 3485 2088 7 718 345 82 0 0 chrX 17474015 17474064 -149176232 + (TTG)n Simple_repeat Simple_repeat 2 50 0 7 718 27688 164 16 43 chrX 17474064 17475553 -149174743 - L1_Mus2 LINE L1 -3796 2087 640 7 718 247 262 93 23 chrX 17475725 17475811 -149174485 + L1M4b LINE L1 3385 3476 -3858 7 718 2033 146 35 0 chrX 17476458 17476774 -149173522 - ORR1A2 LTR MaLR 0 327 1 7 718 494 111 0 0 chrX 17476774 17476846 -149173450 - ORR1A2-int LTR MaLR 0 1963 1892 7 718 4317 162 116 6 chrX 17476950 17477855 -149172441 - ORR1A2-int LTR MaLR -74 1718 730 7 718 4224 35 0 0 chrX 17477855 17478337 -149171959 - LTRIS_Mm LTR ERV1 0 482 1 7 718 4317 161 117 6 chrX 17478337 17478358 -149171938 - ORR1A2-int LTR MaLR -1063 729 710 7 718 35915 35 10 12 chrX 17478358 17482807 -149167489 - MuRRS-int LTR ERV1 -21 4669 1 7 718 4174 37 0 0 chrX 17482807 17483289 -149167007 - LTRIS_Mm LTR ERV1 0 482 1 7 718 3077 170 31 42 chrX 17483290 17484028 -149166268 - ORR1A2-int LTR MaLR -1060 732 3 7 718 2085 139 6 39 chrX 17484028 17484093 -149166203 - ORR1A2 LTR MaLR -2 325 270 7 718 1600 27 0 11 chrX 17484093 17484281 -149166015 - B2_Mm1a SINE B2 -6 187 2 7 718 2085 139 6 39 chrX 17484281 17484551 -149165745 - ORR1A2 LTR MaLR -58 269 1 7 718 1429 185 127 25 chrX 17484819 17485116 -149165180 + BGLII_B LTR ERVK 1 329 -112 7 718 363 23 0 0 chrX 17485116 17485160 -149165136 + (TAGTG)n Simple_repeat Simple_repeat 2 45 0 7 718 1429 235 71 81 chrX 17485160 17485389 -149164907 + BGLII_B LTR ERVK 223 433 -8 7 718 525 44 0 0 chrX 17486987 17487055 -149163241 + (TC)n Simple_repeat Simple_repeat 2 69 0 7 718 205 197 16 16 chrX 17487119 17487181 -149163115 + CT-rich Low_complexity Low_complexity 1 62 0 7 718 4275 137 23 49 chrX 17487203 17488034 -149162262 - RMER17D2 LTR ERVK 0 809 1 7 718 1335 183 92 24 chrX 17488088 17488424 -149161872 - ORR1B2 LTR MaLR -8 359 1 7 718 345 291 32 19 chrX 17488444 17488598 -149161698 + CT-rich Low_complexity Low_complexity 1 156 0 7 718 503 142 4 4 chrX 17488670 17488778 -149161518 - B1_Mur4 SINE Alu 0 150 40 7 718 435 302 19 37 chrX 17488800 17489263 -149161033 + CT-rich Low_complexity Low_complexity 1 454 0 7 718 457 296 5 32 chrX 17489278 17489665 -149160631 + CT-rich Low_complexity Low_complexity 1 376 0 7 718 22 56 0 0 chrX 17489719 17489755 -149160541 + AT_rich Low_complexity Low_complexity 1 36 0 7 718 776 103 0 74 chrX 17495021 17495102 -149155194 + polypyrimidine Low_complexity Low_complexity 105 179 0 7 718 1145 111 0 11 chrX 17495102 17495284 -149155012 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 7 718 776 103 0 74 chrX 17495284 17495391 -149154905 + polypyrimidine Low_complexity Low_complexity 5 104 0 7 718 547 189 0 53 chrX 17495395 17495585 -149154711 + CT-rich Low_complexity Low_complexity 1 180 0 7 718 554 278 75 26 chrX 17496006 17496313 -149153983 + L1M4 LINE L1 2244 2565 -3581 7 718 1775 202 24 11 chrX 17496313 17496693 -149153603 + ORR1B1 LTR MaLR 2 386 -8 7 718 654 237 103 26 chrX 17496693 17496927 -149153369 + L1M4 LINE L1 2569 2820 -3326 7 718 210 295 0 16 chrX 17497008 17497070 -149153226 + PB1D10 SINE Alu 11 71 -46 7 718 272 70 23 0 chrX 17497179 17497222 -149153074 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 7 718 1014 123 0 0 chrX 17497456 17497618 -149152678 + (GAA)n Simple_repeat Simple_repeat 2 163 0 7 718 442 227 199 13 chrX 17497706 17497914 -149152382 - ORR1C1 LTR MaLR -104 274 9 7 718 250 260 0 40 chrX 17498009 17498085 -149152211 + RLTR42-int LTR ERVK 796 868 -4654 7 718 2522 176 14 0 chrX 17498136 17498568 -149151728 + RLTR42-int LTR ERVK 956 1393 -4129 7 718 3546 181 30 71 chrX 17498599 17499443 -149150853 + RLTR42-int LTR ERVK 1490 2298 -3224 7 718 25 0 0 0 chrX 17499502 17499527 -149150769 + AT_rich Low_complexity Low_complexity 1 25 0 7 718 3465 100 0 0 chrX 17499531 17500000 -149150296 - L1_Mus1 LINE L1 -1 6566 6098 7 718 14391 108 17 1 chrX 17500000 17502512 -149147784 - L1_Mus2 LINE L1 -469 6097 3559 1 718 611 278 93 11 chrX 17502516 17502796 -149147500 + L1M4 LINE L1 3839 4141 -2005 2 718 667 275 28 12 chrX 17502821 17503075 -149147221 + L1M4 LINE L1 4468 4725 -1421 2 718 352 231 64 9 chrX 17503097 17503206 -149147090 + Lx5 LINE L1 6928 7042 -8 3 718 243 161 16 111 chrX 17503542 17503605 -149146691 + RSINE1 SINE B4 109 165 0 4 718 212 234 15 15 chrX 17503606 17503671 -149146625 + (TAAA)n Simple_repeat Simple_repeat 2 66 0 5 718 6694 84 25 2 chrX 17503768 17504850 -149145446 + L1_Mus2 LINE L1 4865 5961 -605 6 718 1473 141 0 0 chrX 17504856 17505083 -149145213 - L1_Mus2 LINE L1 -228 5655 5429 7 718 6641 75 4 0 chrX 17505081 17505993 -149144303 + L1_Mus2 LINE L1 5651 6566 0 7 718 584 281 66 22 chrX 17506016 17506336 -149143960 + L1MA6 LINE L1 5962 6295 -5 8 718 5140 104 3 23 chrX 17506344 17507377 -149142919 + L1VL4 LINE L1 182 1189 -2370 9 718 700 142 0 0 chrX 17507375 17507495 -149142801 + L1VL4 LINE L1 2094 2213 -1346 9 718 262 366 72 32 chrX 17507497 17507748 -149142548 - L2 LINE L2 -2434 985 725 1 718 528 298 144 31 chrX 17507748 17507942 -149142354 + B3 SINE B2 1 216 0 1 718 16422 100 111 23 chrX 17507956 17508634 -149141662 + L1_Mus1 LINE L1 2552 3311 -3256 1 718 606 98 0 0 chrX 17508634 17508716 -149141580 - B2_Mm1t SINE B2 -111 82 1 1 718 16422 100 111 23 chrX 17508716 17511602 -149138694 + L1_Mus1 LINE L1 3312 6553 -14 1 718 1350 218 52 0 chrX 17511623 17511931 -149138365 - L1VL1 LINE L1 -6098 324 1 1 718 1850 193 5 78 chrX 17511972 17512354 -149137942 + ORR1B1 LTR MaLR 41 394 0 1 718 2711 251 33 5 chrX 17512355 17512968 -149137328 - Lx5 LINE L1 -122 6928 6299 1 718 1307 220 44 55 chrX 17512970 17513335 -149136961 + Lx5 LINE L1 5914 6274 -776 1 718 234 0 0 0 chrX 17513358 17513384 -149136912 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1 718 198 0 0 0 chrX 17515107 17515129 -149135167 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 1 718 767 101 11 33 chrX 17515320 17515460 -149134836 + B1_Mm SINE Alu 16 147 0 1 718 1102 92 0 0 chrX 17516373 17516515 -149133781 + B1_Mm SINE Alu 1 142 -5 2 718 1280 201 274 27 chrX 17517041 17517409 -149132887 + RMER6B LTR ERVK 3 461 0 2 718 605 193 9 9 chrX 17518150 17518260 -149132036 + RMER13A LTR ERVK 3 112 -748 2 718 660 276 67 50 chrX 17519025 17519077 -149131219 + B3A SINE B2 1 61 -137 2 718 3787 153 68 30 chrX 17519077 17519771 -149130525 - RMER6D LTR ERVK 0 720 1 2 718 660 278 67 50 chrX 17519771 17519918 -149130378 + B3A SINE B2 62 204 -12 2 718 33 56 0 0 chrX 17519946 17520000 -149130296 + AT_rich Low_complexity Low_complexity 1 54 0 2 718 256 307 80 0 chrX 17520075 17520150 -149130146 - ID4 SINE ID 0 83 3 2 718 27 73 0 0 chrX 17520263 17520318 -149129978 + AT_rich Low_complexity Low_complexity 1 55 0 2 718 632 128 18 0 chrX 17520473 17520582 -149129714 + (GAAA)n Simple_repeat Simple_repeat 3 113 0 2 718 343 313 140 6 chrX 17521016 17521180 -149129116 + MLT1E2 LTR MaLR 11 196 -431 2 718 381 22 0 0 chrX 17521487 17521533 -149128763 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 718 467 361 106 50 chrX 17521677 17522056 -149128240 + MLT1E2 LTR MaLR 226 625 -2 2 718 2417 119 55 41 chrX 17522077 17522419 -149127877 + Lx LINE L1 6187 6548 -106 3 718 2077 121 10 3 chrX 17522419 17522726 -149127570 + RLTR27 LTR ERVK 1 309 0 3 718 2417 119 55 41 chrX 17522726 17522820 -149127476 + Lx LINE L1 6549 6629 -25 3 718 453 36 0 0 chrX 17522825 17522880 -149127416 + (CATA)n Simple_repeat Simple_repeat 2 56 0 3 718 3703 170 32 20 chrX 17522917 17523601 -149126695 + RLTR17 LTR ERVK 1 692 0 3 718 6947 91 9 1 chrX 17524149 17525458 -149124838 - L1_Mus2 LINE L1 -6 6560 5235 3 718 315 0 0 0 chrX 17525458 17525493 -149124803 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 718 6277 117 16 2 chrX 17525493 17525869 -149124427 - L1_Mus2 LINE L1 -649 5234 4859 3 718 2430 54 25 3 chrX 17525905 17526221 -149124075 + L1Md_A LINE L1 6260 6582 0 3 718 8408 76 5 21 chrX 17526240 17527840 -149122456 - L1Md_F LINE L1 -4364 1519 98 3 718 14827 127 3 0 chrX 17527841 17530289 -149120007 - L1_Mus2 LINE L1 -1010 4873 2420 3 718 301 317 24 12 chrX 17530371 17530454 -149119842 - RSINE1 SINE B4 0 165 82 3 718 9646 35 2 0 chrX 17530524 17532397 -149117899 - L1Md_F2 LINE L1 -1 6581 4704 4 718 502 338 49 61 chrX 17532397 17532561 -149117735 - B4A SINE B4 -129 163 2 4 718 434 263 31 10 chrX 17532638 17532734 -149117562 + B1F SINE Alu 1 98 -51 4 718 1833 106 28 31 chrX 17533203 17533526 -149116770 + RLTRETN_Mm LTR ERVK 1 322 0 4 718 10912 33 1 2 chrX 17533526 17534866 -149115430 + ETnERV-int LTR ERVK 1 1339 -1975 4 718 404 103 0 0 chrX 17534845 17534903 -149115393 + ETnERV-int LTR ERVK 1598 1655 -1659 4 718 11175 93 10 24 chrX 17534904 17536761 -149113535 + MMETn-int LTR ERVK 3219 4844 0 4 718 1871 106 28 28 chrX 17536761 17537083 -149113213 + RLTRETN_Mm LTR ERVK 1 322 0 4 718 742 251 20 70 chrX 17537083 17537284 -149113012 + B3A SINE B2 8 198 0 4 718 271 319 0 0 chrX 17537386 17537455 -149112841 + ID2 SINE ID 4 72 -11 4 718 423 0 0 0 chrX 17537457 17537504 -149112792 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 718 360 282 214 94 chrX 17537522 17537714 -149112582 + ID_B1 SINE B4 2 216 -8 4 718 249 248 83 37 chrX 17537732 17537841 -149112455 - RMER17D2 LTR ERVK -454 355 242 4 718 216 97 0 0 chrX 17538728 17538759 -149111537 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 5 718 825 218 82 10 chrX 17538760 17538955 -149111341 - ID_B1 SINE B4 -14 210 2 5 718 791 100 28 7 chrX 17538965 17539106 -149111190 + (TTCC)n Simple_repeat Simple_repeat 2 145 0 5 718 427 342 0 0 chrX 17539967 17540087 -149110209 - B3A SINE B2 -78 120 1 5 718 7085 53 7 1 chrX 17540334 17541254 -149109042 + L1_Mus1 LINE L1 5643 6567 0 5 718 297 284 12 58 chrX 17541255 17541341 -149108955 + RSINE1 SINE B4 84 165 0 5 718 343 259 259 0 chrX 17541421 17541533 -149108763 - L1MEd LINE L1 -5932 187 47 5 718 213 337 36 0 chrX 17541558 17541641 -149108655 - MIRb SINE MIR -73 195 110 5 718 533 15 0 15 chrX 17542484 17542551 -149107745 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 5 718 1312 271 99 23 chrX 17542889 17543611 -149106685 + RMER1B Other Other 1 520 -546 5 718 1617 182 42 14 chrX 17543644 17544000 -149106296 + RMER3D-int LTR ERVK 1015 1380 -1462 6 718 929 113 7 19 chrX 17544108 17544262 -149106034 + RMER3D-int LTR ERVK 1382 1533 -1309 6 718 5971 168 25 43 chrX 17544294 17545627 -149104669 + RMER3D-int LTR ERVK 1532 2841 -1 6 718 1694 211 117 58 chrX 17545628 17546150 -149104146 + RLTR31_Mur LTR ERVK 1 553 0 6 718 614 153 0 51 chrX 17546167 17546305 -149103991 + RMER3D-int LTR ERVK 2558 2688 -154 6 718 2146 169 2 76 chrX 17546305 17546502 -149103794 + ORR1A3-int LTR MaLR 249 446 -1517 6 718 1691 214 38 175 chrX 17546502 17547210 -149103086 - RMER19C LTR ERVK 0 611 1 6 718 2146 169 2 76 chrX 17547210 17547394 -149102902 + ORR1A3-int LTR MaLR 447 617 -1346 6 718 1331 98 16 0 chrX 17547394 17547578 -149102718 - B2_Mm2 SINE B2 -8 187 1 6 718 2146 169 2 76 chrX 17547578 17547618 -149102678 + ORR1A3-int LTR MaLR 618 640 -1323 6 718 1131 174 80 13 chrX 17547664 17547903 -149102393 + MT2B LTR ERVL 5 259 -342 6 718 301 265 112 0 chrX 17547819 17547917 -149102379 + PB1D9 SINE Alu 12 120 0 6 718 180 0 0 0 chrX 17547917 17547937 -149102359 + (A)n Simple_repeat Simple_repeat 1 20 0 6 718 320 230 72 99 chrX 17547937 17548048 -149102248 + MT2B LTR ERVL 155 262 -339 6 718 640 184 63 16 chrX 17548013 17548140 -149102156 + ORR1A3-int LTR MaLR 877 1009 -954 6 718 678 179 61 43 chrX 17548110 17548273 -149102023 - ORR1B1 LTR MaLR -202 192 27 6 718 2127 166 69 11 chrX 17548275 17548810 -149101486 + Lx7 LINE L1 2861 3426 -2454 7 718 1014 204 75 16 chrX 17548810 17549047 -149101249 - ORR1A3 LTR MaLR -82 285 20 7 718 2620 121 2 208 chrX 17549055 17549655 -149100641 - ORR1A3-int LTR MaLR 0 1963 1491 7 718 3458 163 52 73 chrX 17549655 17550620 -149099676 + RLTR13D6 LTR ERVK 1 983 0 7 718 7848 151 16 110 chrX 17550620 17552269 -149098027 - ORR1A3-int LTR MaLR -472 1491 1 7 718 1743 155 27 61 chrX 17552273 17552602 -149097694 - ORR1A3 LTR MaLR -8 318 1 7 718 3877 155 35 14 chrX 17552603 17553384 -149096912 + Lx7 LINE L1 3437 4233 -1647 7 718 3242 33 30 0 chrX 17553384 17553783 -149096513 + IAPLTR2a LTR ERVK 1 411 0 7 718 929 115 25 94 chrX 17553784 17553985 -149096311 + IAPEz-int LTR ERVK 9 195 -6286 7 718 239 302 0 0 chrX 17553985 17554038 -149096258 + RLTR27 LTR ERVK 223 275 -34 7 718 3774 47 2 18 chrX 17554038 17554541 -149095755 + IAPEz-int LTR ERVK 168 662 -5819 7 718 2583 61 0 3 chrX 17554541 17554884 -149095412 + IAPEz-int LTR ERVK 1359 1700 -4781 7 718 5990 58 12 18 chrX 17554879 17555711 -149094585 + IAPEz-int LTR ERVK 5653 6479 -2 7 718 3232 35 30 0 chrX 17555713 17556112 -149094184 + IAPLTR2a LTR ERVK 1 411 0 7 718 7547 164 59 20 chrX 17556113 17557908 -149092388 + Lx7 LINE L1 4229 6185 -1511 7 718 189 107 0 0 chrX 17557908 17557936 -149092360 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 718 7115 206 105 50 chrX 17557936 17558423 -149091873 + Lx7 LINE L1 6186 6726 -970 7 718 2886 81 28 2 chrX 17558423 17558820 -149091476 - MTB_Mm LTR MaLR 0 407 1 7 718 7115 206 105 50 chrX 17558820 17559650 -149090646 + Lx7 LINE L1 6727 7519 -177 7 718 5228 108 53 72 chrX 17559650 17560567 -149089729 + RMER17A2 LTR ERVK 4 903 -3 7 718 465 19 0 0 chrX 17560574 17560628 -149089668 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 718 861 70 148 0 chrX 17560638 17560766 -149089530 + B1_Mus1 SINE Alu 1 147 -1 7 718 7115 206 105 50 chrX 17560766 17560941 -149089355 + Lx7 LINE L1 7528 7693 -3 7 718 986 317 87 16 chrX 17561076 17561457 -149088839 - LTR40b LTR ERVL -2 460 53 8 718 521 304 0 48 chrX 17561441 17561586 -149088710 + B1F SINE Alu 12 149 0 8 718 315 282 97 27 chrX 17562213 17562399 -149087897 + L1MC5 LINE L1 6638 6836 -1125 8 718 294 279 13 0 chrX 17562569 17562648 -149087648 - ID4 SINE ID -2 81 2 8 718 307 154 51 13 chrX 17562695 17562774 -149087522 + L1MC5 LINE L1 6960 7041 -920 8 718 726 340 121 22 chrX 17562797 17563302 -149086994 + L2 LINE L2 2323 2877 -542 8 719 382 321 0 0 chrX 17563789 17563873 -149086423 + ID_B1 SINE B4 37 120 -104 8 719 228 86 0 0 chrX 17563893 17563928 -149086368 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 8 719 906 162 134 0 chrX 17564231 17564410 -149085886 + RLTR26 LTR ERVK 24 226 -416 8 719 2430 88 3 9 chrX 17564410 17564755 -149085541 - MERVK26-int LTR ERVK -6576 343 1 8 719 3508 164 51 11 chrX 17564755 17565364 -149084932 - RLTR26 LTR ERVK 0 642 10 8 719 1312 241 77 51 chrX 17566290 17566640 -149083656 - ORR1D2 LTR MaLR -2 368 10 8 719 595 281 61 5 chrX 17566867 17567064 -149083232 + RMER20B LTR ERVK 122 329 -298 9 719 1313 156 5 10 chrX 17567819 17568026 -149082270 + MTC LTR MaLR 5 210 -211 9 719 12776 54 2 1 chrX 17568026 17569719 -149080577 + L1Md_F3 LINE L1 3892 5586 -297 9 719 8368 33 4 0 chrX 17569719 17570712 -149079584 + L1Md_F3 LINE L1 5587 6583 -1 9 719 1247 204 0 9 chrX 17570720 17570948 -149079348 + MTC LTR MaLR 196 421 0 9 719 434 198 22 11 chrX 17571031 17571123 -149079173 - RCHARR1 DNA MER1_type -1 973 881 9 719 1148 216 182 10 chrX 17571129 17571442 -149078854 + ORR1D2 LTR MaLR 4 370 0 9 719 4412 266 44 64 chrX 17571442 17571989 -149078307 + ORR1D2-int LTR MaLR 1 541 -829 9 719 1182 55 7 0 chrX 17571989 17572135 -149078161 + B1_Mus2 SINE Alu 1 147 0 9 719 4412 266 44 64 chrX 17572135 17572582 -149077714 + ORR1D2-int LTR MaLR 542 976 -394 9 719 6320 9 0 0 chrX 17572582 17573282 -149077014 + L1Md_T LINE L1 5883 6582 0 9 719 4412 266 44 64 chrX 17573282 17573684 -149076612 + ORR1D2-int LTR MaLR 977 1370 0 9 719 1195 260 82 6 chrX 17573686 17574026 -149076270 + ORR1D2 LTR MaLR 3 368 -2 9 719 465 286 135 0 chrX 17574252 17574378 -149075918 + B1_Mur1 SINE Alu 3 145 -4 9 719 396 0 0 0 chrX 17574378 17574422 -149075874 + (GA)n Simple_repeat Simple_repeat 1 44 0 9 719 2162 190 38 104 chrX 17574422 17574950 -149075346 + RLTR16 LTR ERVK 1 493 -12 9 719 1196 228 74 3 chrX 17574981 17575280 -149075016 - RCHARR1 DNA MER1_type -149 825 506 9 719 230 231 0 15 chrX 17575303 17575369 -149074927 + L1_Mus1 LINE L1 201 265 -6351 1 719 1959 178 8 0 chrX 17575344 17575714 -149074582 + L1_Mus1 LINE L1 675 1047 -5569 1 719 10164 131 7 2 chrX 17575712 17577473 -149072823 + L1_Mus1 LINE L1 1660 3429 -2454 1 719 7066 82 11 1 chrX 17577473 17578925 -149071371 + L1_Mus1 LINE L1 5099 6566 -1 1 719 14971 107 10 18 chrX 17578934 17582142 -149068154 + L1_Mus1 LINE L1 3389 6567 0 1 719 1634 254 62 2 chrX 17582174 17582580 -149067716 - RCHARR1 DNA MER1_type -488 486 57 9 719 489 202 0 0 chrX 17582590 17582669 -149067627 - B1_Mur2 SINE Alu -32 117 39 1 719 272 339 9 0 chrX 17582674 17582783 -149067513 + (CCTG)n Simple_repeat Simple_repeat 2 111 0 1 719 231 226 19 0 chrX 17582785 17582838 -149067458 + MurSatRep1 Unknown Unknown 230 283 -1854 1 719 667 155 8 33 chrX 17583437 17583557 -149066739 + B1_Mur3 SINE Alu 33 149 0 1 719 207 0 0 0 chrX 17583942 17583965 -149066331 + (A)n Simple_repeat Simple_repeat 1 23 0 1 719 258 57 37 19 chrX 17584219 17584273 -149066023 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 1 719 922 157 7 0 chrX 17584273 17584420 -149065876 - B1_Mus1 SINE Alu 0 148 1 1 719 717 218 14 21 chrX 17584448 17584593 -149065703 - B1_Mur3 SINE Alu 0 149 6 1 719 216 97 0 0 chrX 17584625 17584656 -149065640 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1 719 245 131 66 0 chrX 17584774 17584835 -149065461 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 719 589 323 0 0 chrX 17584987 17585117 -149065179 + RSINE1 SINE B4 22 151 -14 1 719 297 51 0 0 chrX 17585132 17585171 -149065125 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1 719 21 0 0 0 chrX 17585197 17585218 -149065078 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 1555 250 65 30 chrX 17585426 17585826 -149064470 + MTD LTR MaLR 6 419 0 1 719 514 319 13 9 chrX 17585881 17586029 -149064267 + ID_B1 SINE B4 81 224 -68 1 719 361 140 0 55 chrX 17586152 17586243 -149064053 + Lx LINE L1 6567 6652 -2 1 719 3572 56 7 0 chrX 17586284 17586733 -149063563 + L1_Mus1 LINE L1 6113 6564 -3 1 719 21 0 0 0 chrX 17586737 17586758 -149063538 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 207 0 0 0 chrX 17586769 17586792 -149063504 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 719 2212 123 75 3 chrX 17586884 17587242 -149063054 + LTRIS4 LTR ERV1 124 507 0 1 719 281 275 181 13 chrX 17587528 17587760 -149062536 + L1MC LINE L1 5269 5539 -2343 1 719 23 54 0 0 chrX 17587818 17587855 -149062441 + AT_rich Low_complexity Low_complexity 1 37 0 1 719 1340 175 8 23 chrX 17587927 17588185 -149062111 + RMER10B LTR ERVL 31 284 -114 1 719 1648 182 19 100 chrX 17588182 17588474 -149061822 - RLTR41 LTR ERV1 -8 438 146 1 719 2980 35 0 0 chrX 17588474 17588820 -149061476 + ORR1A0 LTR MaLR 1 346 0 1 719 13661 50 25 1 chrX 17588820 17590569 -149059727 + ORR1A0-int LTR MaLR 1 1791 -1 1 719 2987 23 6 0 chrX 17590570 17590914 -149059382 + ORR1A0 LTR MaLR 1 346 0 1 719 1648 182 19 100 chrX 17590914 17590997 -149059299 - RLTR41 LTR ERV1 -301 145 92 1 719 590 144 0 0 chrX 17591043 17591133 -149059163 + RMER10B LTR ERVL 309 398 0 1 719 234 143 0 0 chrX 17591151 17591193 -149059103 + L1P5 LINE L1 5785 5826 -330 1 719 595 289 39 26 chrX 17591336 17591489 -149058807 + ID_B1 SINE B4 25 179 -45 1 719 334 321 74 63 chrX 17591499 17591768 -149058528 - B4A SINE B4 -19 273 2 1 719 563 62 12 0 chrX 17591896 17591976 -149058320 + (GA)n Simple_repeat Simple_repeat 2 82 0 1 719 453 116 0 0 chrX 17591972 17592041 -149058255 + (GGA)n Simple_repeat Simple_repeat 2 70 0 1 719 248 342 14 0 chrX 17592273 17592346 -149057950 + ID4 SINE ID 3 76 -7 1 719 21 0 0 0 chrX 17592382 17592403 -149057893 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 282 342 93 106 chrX 17592749 17593060 -149057236 - Charlie8 DNA MER1_type -1993 435 129 1 719 1917 164 177 31 chrX 17594395 17594784 -149055512 + RLTR41 LTR ERV1 1 446 0 1 719 189 163 0 0 chrX 17594872 17594921 -149055375 + T-rich Low_complexity Low_complexity 1 49 0 1 719 372 94 0 0 chrX 17595125 17595178 -149055118 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 719 511 297 76 23 chrX 17595355 17595617 -149054679 + L1M5 LINE L1 5499 5774 -388 1 719 317 323 20 20 chrX 17595626 17595727 -149054569 + MTD LTR MaLR 6 106 -313 1 719 502 290 106 28 chrX 17596041 17596296 -149054000 - RLTR16 LTR ERVK -207 298 24 1 719 779 280 54 68 chrX 17596297 17596520 -149053776 + MTD LTR MaLR 103 335 -84 1 719 2132 136 9 3 chrX 17596520 17596845 -149053451 + ORR1A2 LTR MaLR 1 327 0 1 719 779 280 54 68 chrX 17596845 17596916 -149053380 + MTD LTR MaLR 336 393 -26 1 719 3432 147 22 0 chrX 17596916 17597452 -149052844 + L1_Mur2 LINE L1 3520 4056 -1821 1 719 180 0 0 0 chrX 17597452 17597472 -149052824 + (TC)n Simple_repeat Simple_repeat 2 21 0 1 719 3432 147 22 0 chrX 17597472 17597561 -149052735 + L1_Mur2 LINE L1 4057 4158 -1719 1 719 26493 103 18 30 chrX 17597632 17599027 -149051269 + ETnERV3-int LTR ERVK 186 1685 -5568 1 719 195 42 0 0 chrX 17599027 17599051 -149051245 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1 719 26493 87 19 33 chrX 17599051 17602009 -149048287 + ETnERV3-int LTR ERVK 1430 4377 -1431 1 719 23 33 0 0 chrX 17602009 17602039 -149048257 + AT_rich Low_complexity Low_complexity 1 30 0 1 719 33622 72 2 14 chrX 17602042 17608213 -149042083 - L1Md_F2 LINE L1 0 6582 487 1 719 2354 126 72 30 chrX 17608214 17608674 -149041622 + ETnERV3-int LTR ERVK 4369 4847 -961 1 719 788 83 0 129 chrX 17608674 17608813 -149041483 + RLTR13B1 LTR ERVK 773 893 0 1 719 7103 122 10 1 chrX 17608813 17610466 -149039830 + L1_Mus4 LINE L1 4966 6632 -4 1 719 1103 254 82 21 chrX 17610732 17611061 -149039235 + ORR1E LTR MaLR 6 365 -5 1 719 291 246 49 0 chrX 17611106 17611167 -149039129 + ID_B1 SINE B4 136 199 -25 1 719 223 312 13 0 chrX 17611169 17611246 -149039050 + (CATA)n Simple_repeat Simple_repeat 3 80 0 1 719 26 50 0 0 chrX 17611462 17611502 -149038794 + AT_rich Low_complexity Low_complexity 1 40 0 1 719 8978 152 35 12 chrX 17611621 17612885 -149037411 + Lx4B LINE L1 4134 5445 -432 1 719 333 0 0 0 chrX 17612885 17612922 -149037374 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 1 719 8978 172 41 7 chrX 17612922 17614481 -149035815 + Lx4B LINE L1 5446 7055 -3 1 719 5129 90 57 24 chrX 17614668 17615408 -149034888 + L1Md_F2 LINE L1 271 994 -5528 1 719 3191 58 0 0 chrX 17615408 17615807 -149034489 + L1Md_T LINE L1 6184 6582 0 1 719 30715 71 6 9 chrX 17615807 17620280 -149030016 + L1Md_F2 LINE L1 995 5589 -297 1 719 7818 63 3 0 chrX 17620280 17621271 -149029025 + L1Md_F2 LINE L1 5590 6583 -2 1 719 380 55 0 18 chrX 17621275 17621331 -149028965 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 719 341 252 32 8 chrX 17621340 17621464 -149028832 + L1_Mur3 LINE L1 1455 1581 -4299 1 719 653 263 25 35 chrX 17621465 17621502 -149028794 - ORR1D2 LTR MaLR 0 370 340 1 719 2833 46 3 3 chrX 17621502 17621848 -149028448 + ORR1A1 LTR MaLR 1 346 0 1 719 653 263 25 35 chrX 17621848 17622007 -149028289 - ORR1D2 LTR MaLR -31 339 176 1 719 544 126 47 28 chrX 17621975 17622081 -149028215 + ORR1A4 LTR MaLR 222 329 0 1 719 834 273 32 0 chrX 17622081 17622252 -149028044 - ORR1D2 LTR MaLR -193 177 1 1 719 316 300 108 4 chrX 17622252 17622483 -149027813 + L1_Rod LINE L1 1665 1919 -3928 1 719 1992 116 106 9 chrX 17622505 17622854 -149027442 + RLTR9A2 LTR ERVK 1 383 0 1 719 3187 32 45 0 chrX 17622896 17623275 -149027021 - MTA_Mm LTR MaLR 0 396 1 1 719 700 274 13 0 chrX 17623470 17623627 -149026669 + B3 SINE B2 4 162 -54 1 719 1573 260 63 44 chrX 17623677 17624287 -149026009 + L1_Mur3 LINE L1 2179 2817 -3063 1 719 1109 68 0 45 chrX 17624287 17624427 -149025869 + B1_Mm SINE Alu 1 136 -11 1 719 207 0 0 0 chrX 17624427 17624450 -149025846 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1 719 1109 68 0 45 chrX 17624450 17624463 -149025833 + B1_Mm SINE Alu 137 147 0 1 719 1573 260 63 44 chrX 17624463 17624628 -149025668 + L1_Mur3 LINE L1 2818 2969 -2911 1 719 369 0 0 0 chrX 17624630 17624671 -149025625 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1 719 782 164 37 0 chrX 17624671 17624805 -149025491 - B1_Mus2 SINE Alu -7 140 2 1 719 216 0 0 0 chrX 17624811 17624835 -149025461 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1 719 417 279 143 0 chrX 17624905 17625156 -149025140 + L1_Mur3 LINE L1 2960 3246 -2634 1 719 906 266 54 147 chrX 17625159 17625199 -149025097 + RLTR18 LTR ERVK 5 53 -563 1 719 423 0 0 0 chrX 17625199 17625246 -149025050 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 1 719 906 251 53 108 chrX 17625246 17625836 -149024460 + RLTR18 LTR ERVK 54 523 -93 1 719 2255 116 2 27 chrX 17625826 17626200 -149024096 + RLTR9E LTR ERVK 6 364 -39 1 719 1256 210 67 39 chrX 17626203 17626564 -149023732 + ETnERV2-int LTR ERVK 17 387 -2927 1 719 5466 201 78 62 chrX 17626574 17629633 -149020663 + ETnERV2-int LTR ERVK 1071 4188 -3218 1 719 186 296 41 27 chrX 17629633 17629706 -149020590 - L4 LINE RTE -1231 798 725 1 719 495 99 0 0 chrX 17629706 17629777 -149020519 + ETnERV2-int LTR ERVK 4263 4333 -3073 1 719 8877 82 2 13 chrX 17629777 17631997 -149018299 + L1Md_F LINE L1 386 2580 -3303 1 719 5048 56 28 0 chrX 17631994 17632669 -149017627 + L1Md_F2 LINE L1 5866 6559 -23 1 719 216 0 0 0 chrX 17632669 17632693 -149017603 + (TAA)n Simple_repeat Simple_repeat 1 24 0 1 719 9773 96 19 14 chrX 17632693 17634103 -149016193 + ETnERV2-int LTR ERVK 4325 5742 -1664 1 719 857 163 0 20 chrX 17634103 17634253 -149016043 + RLTR9E LTR ERVK 263 409 0 1 719 243 161 15 61 chrX 17634332 17634398 -149015898 + L1_Mur3 LINE L1 3250 3312 -2568 1 719 593 61 0 12 chrX 17634401 17634484 -149015812 + (TATATG)n Simple_repeat Simple_repeat 2 83 0 1 719 3583 191 88 37 chrX 17634541 17635083 -149015213 + L1VL4 LINE L1 33 581 -5721 1 719 390 63 0 16 chrX 17635083 17635147 -149015149 + L1_Mus4 LINE L1 6561 6623 -13 1 719 672 77 0 0 chrX 17635147 17635238 -149015058 + (GGAA)n Simple_repeat Simple_repeat 2 92 0 1 719 9348 107 23 9 chrX 17635238 17636967 -149013329 + L1VL4 LINE L1 582 2359 -1200 1 719 4254 176 43 11 chrX 17637006 17637631 -149012665 + L1VL2 LINE L1 419 1059 -5575 1 719 261 0 0 0 chrX 17637631 17637660 -149012636 + (ATG)n Simple_repeat Simple_repeat 2 30 0 1 719 21008 149 13 15 chrX 17637660 17638551 -149011745 + L1VL2 LINE L1 1060 1969 -3914 1 719 3137 34 5 8 chrX 17638551 17638935 -149011361 + L1Md_F3 LINE L1 6202 6584 0 1 719 21008 145 8 15 chrX 17638935 17642127 -149008169 + L1VL2 LINE L1 1970 5128 -755 1 719 18305 151 44 70 chrX 17642146 17645997 -149004299 + Lx3C LINE L1 231 3932 -1951 1 719 185 0 0 39 chrX 17645997 17646023 -149004273 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1 719 18305 162 51 61 chrX 17646023 17649038 -149001258 + Lx3C LINE L1 3933 6970 -6 1 719 267 290 11 0 chrX 17649138 17649231 -149001065 + L1_Mur3 LINE L1 4044 4137 -1743 1 719 964 238 37 32 chrX 17649276 17649623 -149000673 + Lx7 LINE L1 5633 5996 -1477 1 719 244 179 18 0 chrX 17649793 17649849 -149000447 + L1M4 LINE L1 3257 3313 -2833 1 719 1729 188 61 40 chrX 17650525 17650901 -148999395 + ORR1C2 LTR MaLR 1 384 0 1 719 237 294 0 0 chrX 17651217 17651309 -148998987 + L1M2c LINE L1 1869 1960 -4829 1 719 462 350 6 12 chrX 17651534 17651699 -148998597 + RSINE1 SINE B4 2 165 0 1 719 232 370 83 8 chrX 17651800 17651920 -148998376 + B3 SINE B2 84 212 -4 1 719 23 33 0 0 chrX 17651946 17651976 -148998320 + AT_rich Low_complexity Low_complexity 1 30 0 1 719 2922 61 3 0 chrX 17652004 17652395 -148997901 + L1Md_F2 LINE L1 6167 6558 -24 1 719 301 246 0 0 chrX 17652398 17652455 -148997841 - PB1D9 SINE Alu -63 57 1 1 719 2420 114 8 0 chrX 17652471 17652823 -148997473 - MMETn-int LTR ERVK -619 6787 6433 1 719 4611 49 3 2 chrX 17652831 17653402 -148996894 - L1Md_F3 LINE L1 -1 6583 6012 2 719 17527 83 4 10 chrX 17653402 17656625 -148993671 - L1Md_A LINE L1 -2241 3642 441 2 719 1160 185 11 20 chrX 17656655 17657014 -148993282 - MMETn-int LTR ERVK -976 6430 6127 1 719 5010 181 42 42 chrX 17656983 17659404 -148990892 - MMETn-int LTR ERVK -3321 4085 2356 1 719 5743 135 12 92 chrX 17659484 17660710 -148989586 - MMETn-int LTR ERVK -3714 1130 3 1 719 852 192 28 140 chrX 17660714 17661072 -148989224 - RLTRETN_Mm LTR ERVK 0 322 5 1 719 462 263 102 14 chrX 17661180 17661396 -148988900 + L1ME3A LINE L1 5695 5929 -244 2 719 603 237 74 0 chrX 17661409 17661544 -148988752 + MER58A DNA MER1_type 13 157 -67 2 719 253 196 0 0 chrX 17661598 17661649 -148988647 + L1ME3A LINE L1 5925 5975 -198 2 719 4331 17 0 0 chrX 17661948 17662430 -148987866 - LTRIS_Mm LTR ERV1 0 482 1 2 719 226 303 64 26 chrX 17662432 17662510 -148987786 + MER20 DNA MER1_type 3 83 -136 2 719 878 254 15 45 chrX 17662637 17662839 -148987457 - B3A SINE B2 0 198 3 2 719 443 287 64 82 chrX 17662854 17663074 -148987222 - ORR1E LTR MaLR -70 289 74 2 719 632 244 31 0 chrX 17663367 17663494 -148986802 + RSINE1 SINE B4 6 136 -29 2 719 484 275 14 36 chrX 17663700 17663878 -148986418 + MIR SINE MIR 51 215 -53 2 719 465 240 50 0 chrX 17663883 17663983 -148986313 + PB1D7 SINE Alu 16 120 0 2 719 1348 226 71 79 chrX 17664298 17664807 -148985489 - RLTR16 LTR ERVK 0 505 1 2 719 1108 246 82 54 chrX 17664807 17665162 -148985134 - MTD LTR MaLR -20 399 1 2 719 566 348 7 14 chrX 17665215 17665358 -148984938 - RSINE1 SINE B4 -16 149 8 2 719 279 328 0 0 chrX 17665576 17665637 -148984659 + ID4_ SINE ID 22 82 -1 2 719 2138 174 120 8 chrX 17666030 17666504 -148983792 - RLTR11A2 LTR ERVK 0 527 1 2 719 239 320 35 104 chrX 17667201 17667316 -148982980 + MIRm SINE MIR 34 140 -128 2 719 182 340 20 30 chrX 17667424 17667524 -148982772 + MIRc SINE MIR 154 252 -16 2 719 183 156 0 0 chrX 17667572 17667604 -148982692 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 719 2642 187 60 25 chrX 17667628 17668181 -148982115 + RMER15 LTR ERVL 1 572 -3 2 719 189 0 0 0 chrX 17668517 17668538 -148981758 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 2 719 3039 81 2 2 chrX 17668612 17669008 -148981288 - MTA_Mm LTR MaLR 0 396 1 2 719 7501 80 9 69 chrX 17669009 17670175 -148980121 - MTA_Mm-int LTR MaLR -1 1097 1 2 719 2553 75 97 3 chrX 17670175 17670537 -148979759 - MTA_Mm LTR MaLR 0 396 1 2 719 531 45 0 0 chrX 17671044 17671110 -148979186 + (TA)n Simple_repeat Simple_repeat 2 67 0 2 719 381 43 0 0 chrX 17671110 17671156 -148979140 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 719 26 30 0 0 chrX 17671170 17671203 -148979093 + AT_rich Low_complexity Low_complexity 1 33 0 2 719 337 265 132 7 chrX 17671354 17671506 -148978790 - Charlie5 DNA MER1_type -158 2466 2296 2 719 370 383 8 0 chrX 17671513 17671641 -148978655 + ID_B1 SINE B4 82 210 -14 2 719 3419 77 12 29 chrX 17671643 17672124 -148978172 + MT2C_Mm LTR ERVL 1 473 -2 2 719 380 318 0 0 chrX 17672237 17672325 -148977971 - B3A SINE B2 -109 89 2 2 719 379 290 56 0 chrX 17672346 17672453 -148977843 - PB1D7 SINE Alu -6 114 2 2 719 7602 114 10 2 chrX 17672588 17674602 -148975694 + L1_Mus3 LINE L1 4597 6626 -12 2 719 2486 171 4 4 chrX 17674606 17675075 -148975221 + L1_Mm LINE L1 5289 5757 -126 2 719 3813 119 107 17 chrX 17675075 17675779 -148974517 + RMER17A LTR ERVK 1 750 -1 2 719 6662 150 32 38 chrX 17675779 17677032 -148973264 + Lx2 LINE L1 5751 6996 -1 2 719 1587 184 88 23 chrX 17677196 17677581 -148972715 - RLTR9F LTR ERVK 0 415 6 2 719 1847 183 19 0 chrX 17677602 17677914 -148972382 + ORR1A2 LTR MaLR 1 318 -9 2 719 459 35 0 0 chrX 17677914 17677971 -148972325 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 719 317 316 13 0 chrX 17678002 17678078 -148972218 - ID4_ SINE ID -6 77 1 2 719 350 296 12 0 chrX 17678128 17678209 -148972087 + RSINE1 SINE B4 2 83 -82 2 719 457 334 52 58 chrX 17678309 17678617 -148971679 - MT2A LTR ERVL 0 533 228 2 719 262 286 16 125 chrX 17678668 17678796 -148971500 - MTD LTR MaLR -300 119 6 2 719 648 305 76 59 chrX 17678793 17679030 -148971266 - B4 SINE B4 -51 241 1 2 719 378 351 42 38 chrX 17679326 17679539 -148970757 - Helitron3Na_Mam RC Helitron -198 288 75 2 719 418 264 103 87 chrX 17679730 17679925 -148970371 + B3A SINE B2 1 198 0 2 719 539 309 126 25 chrX 17680157 17680396 -148969900 - MLT1L LTR MaLR -45 565 303 2 719 1673 227 118 124 chrX 17680414 17680793 -148969503 - RMER6D LTR ERVK -20 700 360 2 719 252 111 0 0 chrX 17680793 17680838 -148969458 + (AACTG)n Simple_repeat Simple_repeat 3 47 0 2 719 1673 227 118 124 chrX 17680838 17681162 -148969134 - RMER6D LTR ERVK -361 359 1 2 719 1177 151 0 5 chrX 17681162 17681355 -148968941 + B2_Mm2 SINE B2 2 193 -2 2 719 398 336 108 101 chrX 17681398 17681676 -148968620 - MLT1L LTR MaLR -330 280 1 2 719 1451 216 48 114 chrX 17681990 17682196 -148968100 + MTD LTR MaLR 1 206 -213 2 719 2646 148 7 14 chrX 17682196 17682620 -148967676 + MTC LTR MaLR 1 421 0 2 719 1451 216 48 114 chrX 17682620 17682793 -148967503 + MTD LTR MaLR 207 363 -56 2 719 1429 203 80 47 chrX 17682793 17683155 -148967141 + ORR1C1 LTR MaLR 1 374 -4 2 719 1451 216 48 114 chrX 17683155 17683186 -148967110 + MTD LTR MaLR 364 385 -34 2 719 463 234 17 35 chrX 17683237 17683352 -148966944 - B3 SINE B2 -8 208 96 2 719 324 70 0 0 chrX 17683499 17683542 -148966754 + (T)n Simple_repeat Simple_repeat 1 43 0 2 719 242 260 0 0 chrX 17683649 17683699 -148966597 - Lx8 LINE L1 -250 7223 7174 2 719 456 269 28 0 chrX 17683774 17683882 -148966414 + PB1D10 SINE Alu 1 111 -6 2 719 315 0 0 0 chrX 17683997 17684032 -148966264 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 719 459 234 0 112 chrX 17684109 17684234 -148966062 - PB1D9 SINE Alu 0 120 10 2 719 270 160 0 0 chrX 17684238 17684288 -148966008 + (TTG)n Simple_repeat Simple_repeat 2 51 0 2 719 1082 84 7 0 chrX 17684288 17684443 -148965853 + (TTC)n Simple_repeat Simple_repeat 1 156 0 2 719 1491 135 0 0 chrX 17684445 17684482 -148965814 - ORR1B1 LTR MaLR -14 407 345 2 719 2296 132 43 15 chrX 17684482 17684874 -148965422 - L1Md_F2 LINE L1 -1 6581 6179 2 719 1491 171 196 6 chrX 17684874 17685157 -148965139 - ORR1B1 LTR MaLR -50 344 1 2 719 573 263 29 14 chrX 17685185 17685324 -148964972 + ID_B1 SINE B4 84 224 0 2 719 21 0 0 0 chrX 17685535 17685556 -148964740 + AT_rich Low_complexity Low_complexity 1 21 0 2 719 1879 158 53 56 chrX 17685814 17686208 -148964088 + RMER6B LTR ERVK 67 459 -2 2 719 424 239 73 0 chrX 17686210 17686319 -148963977 + MYSERV6-int LTR ERVK 4 120 -8839 2 719 1702 189 5 47 chrX 17686343 17686749 -148963547 + MYSERV6-int LTR ERVK 115 503 -8456 2 719 8283 126 23 10 chrX 17686768 17688961 -148961335 + L1VL2 LINE L1 96 2323 -1292 2 719 1631 144 124 0 chrX 17688962 17689253 -148961043 - IAPEY3_LTR LTR ERVK -5 327 1 2 719 1241 193 58 18 chrX 17689253 17689596 -148960700 - IAP-d-int LTR ERVK 0 6481 6125 2 719 1653 132 48 0 chrX 17689613 17689945 -148960351 - IAPEY3-int LTR ERVK -342 7338 6965 2 719 1242 137 101 9 chrX 17689945 17690173 -148960123 - IAP-d-int LTR ERVK -1287 5255 5007 2 719 385 329 19 19 chrX 17690246 17690524 -148959772 - IAP-d-int LTR ERVK -5520 1022 822 2 719 278 139 0 0 chrX 17690664 17690707 -148959589 - RLTR19-int LTR ERVK -995 992 950 2 719 693 196 192 40 chrX 17690702 17690952 -148959344 - RLTR19-int LTR ERVK -5475 662 375 2 719 6155 105 6 23 chrX 17690952 17691284 -148959012 + L1_Mm LINE L1 1678 2006 -3877 2 719 2170 41 37 0 chrX 17691284 17691554 -148958742 + L1Md_F3 LINE L1 6290 6569 -15 2 719 6155 105 6 23 chrX 17691554 17692246 -148958050 + L1_Mm LINE L1 2007 2684 -3199 2 719 569 356 143 51 chrX 17692835 17693226 -148957070 - LTR16C LTR ERVL -1 488 62 2 719 6249 93 79 7 chrX 17693350 17694368 -148955928 + L1_Mus3 LINE L1 5548 6638 0 2 89 3884 154 26 0 chrX 17694392 17695092 -148955204 + MYSERV6-int LTR ERVK 485 1202 -7757 2 720 2786 190 122 5 chrX 17695092 17695699 -148954597 - RLTR33 LTR ERVK 0 678 1 2 720 1229 176 81 18 chrX 17695854 17696126 -148954170 + MYSERV6-int LTR ERVK 1215 1503 -7456 2 720 2614 160 21 50 chrX 17696126 17696646 -148953650 - RLTR16 LTR ERVK 0 505 1 2 720 4929 150 87 47 chrX 17696647 17697873 -148952423 - MYSERV16_I-int LTR ERVK -1 2325 1051 2 720 2388 181 100 43 chrX 17697867 17698489 -148951807 - MYSERV16_I-int LTR ERVK -1393 933 277 2 720 564 264 8 43 chrX 17698521 17698778 -148951518 - RMER3D-int LTR ERVK -1483 1359 1112 2 720 1108 273 42 89 chrX 17699617 17700147 -148950149 - RLTR16 LTR ERVK 0 505 1 2 720 34982 50 3 0 chrX 17700162 17705575 -148944721 - L1Md_F3 LINE L1 -15 6569 1140 2 720 3194 140 2 4 chrX 17705552 17706126 -148944170 - L1Md_F3 LINE L1 -5520 1204 218 2 720 7007 62 8 11 chrX 17706127 17707045 -148943251 + L1Md_F2 LINE L1 5668 6582 0 2 720 268 215 85 37 chrX 17707045 17707127 -148943169 - MTE2b LTR MaLR -288 91 6 2 720 28 48 0 0 chrX 17707143 17707185 -148943111 + AT_rich Low_complexity Low_complexity 1 42 0 2 720 329 316 0 0 chrX 17707207 17707283 -148943013 - RSINE1 SINE B4 -28 137 62 2 720 1166 151 39 0 chrX 17707410 17707615 -148942681 - Lx2 LINE L1 -6 6991 6779 2 720 1195 188 5 0 chrX 17707620 17707844 -148942452 - Lx2 LINE L1 -355 6642 6418 2 720 5844 78 14 2 chrX 17707842 17708970 -148941326 + MusHAL1 LINE L1 414 1553 -1800 2 720 237 348 0 0 chrX 17709124 17709213 -148941083 - PB1D10 SINE Alu -2 115 27 2 720 207 0 0 0 chrX 17709964 17709987 -148940309 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 2 720 15894 133 151 5 chrX 17709999 17714218 -148936078 + L1_Mus3 LINE L1 1738 6630 -8 2 720 280 152 62 25 chrX 17714227 17714308 -148935988 - MERVL_2A-int LTR ERVL -59 5702 5619 2 720 350 117 39 13 chrX 17714321 17714399 -148935897 - RMER17C LTR ERVK 0 410 331 2 720 2971 129 25 14 chrX 17714406 17714892 -148935404 - MERVL_2A-int LTR ERVL -2844 2917 2427 2 720 4982 130 4 4 chrX 17715598 17716363 -148933933 - MERVL_2A-int LTR ERVL -3331 2430 1666 2 720 1462 181 74 14 chrX 17716363 17716648 -148933648 - ORR1B2 LTR MaLR -65 302 1 2 720 2436 194 58 6 chrX 17716667 17717148 -148933148 + RMER20A LTR ERVK 11 516 0 2 720 8164 156 78 12 chrX 17717148 17718689 -148931607 - MERVL_2A-int LTR ERVL -4117 1644 1 2 720 1055 274 39 64 chrX 17718689 17719187 -148931109 - MT2B LTR ERVL 0 601 5 2 720 334 170 0 0 chrX 17719598 17719651 -148930645 - ID4 SINE ID -26 57 5 2 720 1935 108 208 44 chrX 17719712 17720101 -148930195 - RLTR11B LTR ERVK 0 453 1 2 720 369 326 13 89 chrX 17720103 17720261 -148930035 - B4 SINE B4 -146 146 1 2 720 207 209 0 0 chrX 17720658 17720701 -148929595 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2 720 264 323 0 0 chrX 17720703 17720765 -148929531 - tRNA-Ala-GCY_ tRNA tRNA -8 67 6 2 720 21 36 0 0 chrX 17720891 17720919 -148929377 + AT_rich Low_complexity Low_complexity 1 28 0 2 720 310 323 216 8 chrX 17721054 17721188 -148929108 + RSINE1 SINE B4 4 165 0 2 720 290 237 17 0 chrX 17722032 17722091 -148928205 + ID SINE ID 3 62 -162 2 720 1189 106 0 12 chrX 17722092 17722264 -148928032 + B2_Mm2 SINE B2 15 184 -11 2 720 194 0 39 0 chrX 17722264 17722290 -148928006 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 720 643 251 86 0 chrX 17722295 17722458 -148927838 + ID_B1 SINE B4 48 224 0 2 720 342 0 0 0 chrX 17722577 17722615 -148927681 + (GGA)n Simple_repeat Simple_repeat 3 40 0 3 720 333 118 0 0 chrX 17722620 17722671 -148927625 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 720 695 95 0 9 chrX 17722677 17722783 -148927513 + (GGAA)n Simple_repeat Simple_repeat 4 108 0 3 720 396 0 0 0 chrX 17722787 17722831 -148927465 + (GA)n Simple_repeat Simple_repeat 2 45 0 3 720 1688 181 68 10 chrX 17724799 17725095 -148925201 - MTC LTR MaLR -8 413 101 3 720 878 65 17 0 chrX 17725505 17725635 -148924661 - B1_Mus1 SINE Alu 0 148 1 3 720 189 132 0 0 chrX 17726482 17726520 -148923776 + (G)n Simple_repeat Simple_repeat 1 38 0 3 720 321 284 49 14 chrX 17726715 17726858 -148923438 - L1ME1 LINE L1 -191 5988 5841 3 720 674 295 48 108 chrX 17726953 17727268 -148923028 - MLT1C LTR MaLR 0 467 172 3 720 2681 121 17 13 chrX 17728264 17728699 -148921597 + LTRIS4 LTR ERV1 11 507 0 3 720 2825 147 68 31 chrX 17728795 17729309 -148920987 + RMER16 LTR ERVK 1 533 0 3 720 399 56 0 0 chrX 17729531 17729585 -148920711 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 720 226 205 0 0 chrX 17730501 17730540 -148919756 + C-rich Low_complexity Low_complexity 4 42 0 3 720 867 20 0 0 chrX 17730540 17730641 -148919655 + (TTC)n Simple_repeat Simple_repeat 3 103 0 3 720 195 42 0 0 chrX 17730765 17730789 -148919507 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 720 588 279 12 17 chrX 17730820 17731022 -148919274 - MTEb LTR MaLR -183 196 1 3 720 874 293 24 14 chrX 17731137 17731348 -148918948 - B4 SINE B4 -14 278 66 3 720 395 325 37 31 chrX 17731438 17731600 -148918696 + RSINE1 SINE B4 3 165 0 3 720 205 356 0 0 chrX 17731600 17731673 -148918623 + (CA)n Simple_repeat Simple_repeat 1 73 0 3 720 486 0 0 0 chrX 17732146 17732200 -148918096 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 720 472 315 88 6 chrX 17732755 17732937 -148917359 - Cheshire DNA MER1_type -1305 1115 919 3 720 2604 106 74 0 chrX 17733049 17733427 -148916869 - RMER19A LTR ERVK -331 406 1 3 720 627 260 152 28 chrX 17733427 17733671 -148916625 - Cheshire DNA MER1_type -1586 834 555 3 720 871 239 92 5 chrX 17734045 17734230 -148916066 - B3 SINE B2 -1 215 15 3 720 775 272 132 62 chrX 17734571 17734985 -148915311 - L1MDa LINE L1 -5336 1297 856 3 720 1402 68 15 30 chrX 17734985 17735183 -148915113 + B2_Mm2 SINE B2 1 195 0 3 720 775 272 132 62 chrX 17735183 17735321 -148914975 - L1MDa LINE L1 -5778 855 706 3 720 381 43 0 0 chrX 17735471 17735518 -148914778 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 720 261 57 0 0 chrX 17735569 17735604 -148914692 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 720 465 231 125 0 chrX 17735606 17735710 -148914586 - RSINE1 SINE B4 -41 124 8 3 720 327 234 29 96 chrX 17735796 17735900 -148914396 - PB1D10 SINE Alu 0 117 21 3 720 444 37 0 0 chrX 17736000 17736054 -148914242 + (TTTC)n Simple_repeat Simple_repeat 3 56 0 3 720 198 0 0 0 chrX 17736290 17736312 -148913984 + (T)n Simple_repeat Simple_repeat 1 22 0 3 720 1166 62 0 0 chrX 17736312 17736457 -148913839 - B1_Mm SINE Alu 0 147 3 3 720 23 0 0 0 chrX 17736709 17736732 -148913564 + AT_rich Low_complexity Low_complexity 1 23 0 3 720 559 211 37 0 chrX 17736855 17736964 -148913332 - PB1D9 SINE Alu -1 119 7 3 720 379 151 0 141 chrX 17737018 17737103 -148913193 - RSINE1 SINE B4 0 165 93 3 720 954 106 0 34 chrX 17737300 17737311 -148912985 - B1_Mus1 SINE Alu -5 143 137 3 720 288 0 0 0 chrX 17737311 17737343 -148912953 + (TTA)n Simple_repeat Simple_repeat 2 33 0 3 720 954 106 0 34 chrX 17737343 17737478 -148912818 - B1_Mus1 SINE Alu -12 136 2 3 720 463 211 87 0 chrX 17737703 17737807 -148912489 + PB1D7 SINE Alu 2 114 -6 3 720 255 61 0 0 chrX 17740154 17740187 -148910109 + (CCG)n Simple_repeat Simple_repeat 3 35 0 3 720 225 0 0 0 chrX 17742215 17742240 -148908056 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 720 1074 77 0 0 chrX 17743159 17743302 -148906994 - B1_Mus1 SINE Alu 0 148 6 3 720 521 224 58 83 chrX 17743164 17743320 -148906976 - B4 SINE B4 -71 221 70 3 720 212 86 0 28 chrX 17743650 17743686 -148906610 + (TTA)n Simple_repeat Simple_repeat 2 36 0 3 720 1037 189 20 25 chrX 17743686 17743887 -148906409 - B3 SINE B2 -12 204 5 3 720 329 254 0 15 chrX 17744260 17744328 -148905968 + RSINE1 SINE B4 3 69 -96 3 720 327 25 0 0 chrX 17744356 17744396 -148905900 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 720 985 229 40 0 chrX 17745774 17745975 -148904321 - B3 SINE B2 -6 210 2 3 720 513 271 44 33 chrX 17746000 17746183 -148904113 - B2_Mm2 SINE B2 -2 193 9 3 720 730 238 14 87 chrX 17746190 17746397 -148903899 - B3A SINE B2 -2 196 5 3 720 183 42 0 0 chrX 17746427 17746451 -148903845 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 720 1078 44 22 0 chrX 17746451 17746586 -148903710 - B1_Mm SINE Alu -8 139 2 3 720 338 0 24 0 chrX 17746874 17746916 -148903380 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 3 720 1233 35 0 0 chrX 17746918 17747061 -148903235 - B1_Mus2 SINE Alu -4 143 1 3 720 36 62 0 0 chrX 17747184 17747248 -148903048 + AT_rich Low_complexity Low_complexity 1 64 0 3 720 237 269 109 55 chrX 17747955 17748065 -148902231 + MIR SINE MIR 64 179 -83 3 720 956 63 7 59 chrX 17748456 17748608 -148901688 + B1_Mm SINE Alu 4 147 0 3 720 243 0 0 0 chrX 17749904 17749931 -148900365 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 720 1137 44 0 0 chrX 17749931 17750068 -148900228 - B1_Mus2 SINE Alu -9 138 2 3 720 428 266 0 17 chrX 17750478 17750593 -148899703 - PB1D10 SINE Alu -3 114 2 3 720 461 292 29 80 chrX 17751080 17751255 -148899041 - B4A SINE B4 -118 174 9 3 720 477 204 151 50 chrX 17751323 17751442 -148898854 - B1F2 SINE Alu -9 140 10 3 720 352 302 82 48 chrX 17751442 17751459 -148898837 - B4 SINE B4 -66 177 76 3 720 622 195 79 79 chrX 17751488 17751677 -148898619 - B3A SINE B2 -5 193 5 3 720 266 291 77 55 chrX 17751723 17751814 -148898482 - B1F1 SINE Alu -55 94 2 3 720 439 168 294 18 chrX 17752143 17752252 -148898044 + B1_Mus1 SINE Alu 1 139 -9 3 720 377 324 81 47 chrX 17752365 17752514 -148897782 - RSINE1 SINE B4 -9 156 3 3 720 396 243 111 88 chrX 17752622 17752929 -148897367 - RLTR15 LTR ERVK -18 341 28 3 720 585 290 0 28 chrX 17752884 17753026 -148897270 + RSINE1 SINE B4 15 152 -13 3 720 345 109 0 0 chrX 17753328 17753383 -148896913 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 720 335 373 41 76 chrX 17753392 17753563 -148896733 - RSINE1 SINE B4 0 165 1 3 720 246 339 32 41 chrX 17753626 17753749 -148896547 - B4A SINE B4 -13 279 158 3 720 290 219 128 61 chrX 17753766 17753951 -148896345 - L1MD LINE L1 -1851 4295 4105 3 720 394 237 32 63 chrX 17754044 17754170 -148896126 - RSINE1 SINE B4 -28 137 16 3 720 934 145 214 5 chrX 17754583 17754770 -148895526 + URR1A DNA MER1_type 1 226 0 3 720 207 0 0 0 chrX 17755270 17755293 -148895003 + (TTTTG)n Simple_repeat Simple_repeat 4 26 0 3 720 899 284 30 53 chrX 17755307 17755646 -148894650 + RMER4A LTR ERVK 136 466 0 3 720 685 211 159 24 chrX 17755646 17755815 -148894481 - B3 SINE B2 -21 195 4 3 720 1920 229 34 9 chrX 17755873 17756318 -148893978 - Lx6 LINE L1 -11 7449 6994 3 720 245 289 100 54 chrX 17756419 17756660 -148893636 + L1M4c LINE L1 1365 1616 -4768 3 720 592 263 30 59 chrX 17757331 17757533 -148892763 + B3A SINE B2 2 197 -1 3 720 687 217 86 12 chrX 17757627 17757790 -148892506 - B3 SINE B2 0 216 42 3 720 187 287 65 54 chrX 17757791 17757883 -148892413 + MIRm SINE MIR 59 151 -125 3 720 23 33 0 0 chrX 17758450 17758480 -148891816 + AT_rich Low_complexity Low_complexity 1 30 0 3 720 374 197 30 0 chrX 17758526 17758592 -148891704 - RSINE1 SINE B4 -78 87 20 3 720 571 256 169 0 chrX 17759572 17759732 -148890564 + Tigger5 DNA MER2_type 56 242 -2164 3 720 280 293 0 23 chrX 17759776 17759872 -148890424 - AluG_3 SINE Alu -93 218 28 3 720 637 244 73 63 chrX 17760128 17760334 -148889962 - B3 SINE B2 0 216 9 3 720 1197 41 0 14 chrX 17760545 17760692 -148889604 - B1_Mm SINE Alu 0 147 3 3 720 570 242 102 62 chrX 17760725 17760901 -148889395 - MTEa LTR MaLR -196 183 1 3 720 203 407 51 0 chrX 17761428 17761546 -148888750 - MIRc SINE MIR -86 182 59 3 720 1088 157 104 38 chrX 17761747 17761959 -148888337 - URR1A DNA MER1_type 0 226 1 3 720 746 149 119 0 chrX 17762158 17762292 -148888004 - B1_Mur4 SINE Alu 0 150 1 3 720 3459 158 109 11 chrX 17762318 17762970 -148887326 + RMER6D LTR ERVK 1 716 -4 3 720 369 256 154 22 chrX 17763032 17763168 -148887128 + RSINE1 SINE B4 2 155 -10 3 720 311 94 56 19 chrX 17763194 17763248 -148887048 - RLTR24 LTR ERV1 0 529 474 3 720 492 230 12 12 chrX 17763264 17763431 -148886865 + CT-rich Low_complexity Low_complexity 3 169 0 3 720 1779 127 157 3 chrX 17763435 17763760 -148886536 - RLTR24 LTR ERV1 -149 380 6 3 720 626 269 38 48 chrX 17764028 17764317 -148885979 - RodERV21-int LTR ERV1 -198 4793 4508 3 720 1400 201 80 4 chrX 17764317 17764591 -148885705 - MTE2b LTR MaLR -24 355 61 3 720 246 184 0 0 chrX 17764626 17764664 -148885632 + ID_B1 SINE B4 158 195 -29 3 720 477 297 25 31 chrX 17764909 17765069 -148885227 - B3A SINE B2 -36 162 4 3 720 230 224 169 21 chrX 17765076 17765313 -148884983 - L1MEc LINE L1 -4476 1924 1653 4 720 233 0 62 0 chrX 17765764 17765796 -148884500 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 720 283 259 265 8 chrX 17766281 17766398 -148883898 - B4A SINE B4 -145 147 1 4 720 584 288 133 48 chrX 17767168 17767715 -148882581 - L1ME1 LINE L1 -201 5978 5385 4 720 332 207 169 22 chrX 17767780 17767869 -148882427 - B1_Mur2 SINE Alu 0 149 48 4 720 413 301 10 103 chrX 17767877 17768081 -148882215 - L1MC LINE L1 -843 5303 5119 4 720 520 311 0 125 chrX 17768158 17768342 -148881954 - RSINE1 SINE B4 -2 163 3 4 720 1531 188 151 22 chrX 17768467 17768831 -148881465 - MTD LTR MaLR -8 411 1 4 720 536 191 104 9 chrX 17769284 17769390 -148880906 - B1_Mus2 SINE Alu -21 126 11 4 720 2116 143 120 0 chrX 17769439 17769789 -148880507 - ORR1B1 LTR MaLR 0 394 3 4 720 633 229 0 0 chrX 17770374 17770483 -148879813 + B3 SINE B2 9 117 -99 4 720 384 323 7 83 chrX 17770688 17770833 -148879463 - B1F SINE Alu -15 134 1 4 720 751 250 31 6 chrX 17770924 17771085 -148879211 - B3 SINE B2 -48 168 4 4 720 340 259 40 79 chrX 17771464 17771590 -148878706 - RSINE1 SINE B4 0 165 45 4 720 400 339 111 6 chrX 17771604 17771698 -148878598 - ID_B1 SINE B4 -34 190 81 4 720 231 61 0 0 chrX 17771698 17771731 -148878565 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 720 400 339 111 6 chrX 17771731 17771808 -148878488 - ID SINE ID -144 80 2 4 720 369 279 44 18 chrX 17771899 17772012 -148878284 - PB1D7 SINE Alu 0 120 5 4 720 589 169 115 33 chrX 17773702 17773824 -148876472 - B1_Mur4 SINE Alu -8 142 11 4 720 267 344 125 0 chrX 17774563 17774659 -148875637 - PB1D7 SINE Alu 0 120 13 4 720 365 342 22 44 chrX 17774924 17775150 -148875146 - Lx8 LINE L1 -146 7327 7107 4 720 338 253 62 12 chrX 17775253 17775333 -148874963 - B4 SINE B4 -199 93 10 4 720 645 49 0 0 chrX 17775439 17775520 -148874776 + (TTTC)n Simple_repeat Simple_repeat 1 81 0 4 720 682 56 0 0 chrX 17775520 17775609 -148874687 - B1_Mus2 SINE Alu -12 135 47 4 720 260 279 62 25 chrX 17775551 17775632 -148874664 - RLTR25B LTR ERVK -519 509 426 4 720 324 0 0 0 chrX 17776151 17776187 -148874109 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 720 386 291 92 17 chrX 17777243 17777362 -148872934 - RSINE1 SINE B4 -35 130 3 4 720 469 296 11 90 chrX 17777637 17777815 -148872481 - RSINE1 SINE B4 0 165 2 4 720 602 241 31 103 chrX 17777879 17778073 -148872223 + B3A SINE B2 1 180 -18 4 720 496 227 66 36 chrX 17778074 17778211 -148872085 + B1F SINE Alu 7 147 -2 4 720 1191 41 0 0 chrX 17778239 17778384 -148871912 + B1_Mm SINE Alu 1 145 -2 4 720 432 290 98 15 chrX 17778767 17778900 -148871396 + B3 SINE B2 2 145 -71 4 720 2618 176 68 24 chrX 17779521 17780061 -148870235 + RLTR12A LTR ERVK 1 564 -4 4 720 2661 166 15 26 chrX 17780091 17780624 -148869672 - RLTR11A2 LTR ERVK 0 527 1 4 720 22 0 0 0 chrX 17781428 17781450 -148868846 + AT_rich Low_complexity Low_complexity 1 22 0 4 720 236 367 131 10 chrX 17781711 17781909 -148868387 - Helitron3Na_Mam RC Helitron -127 359 138 4 720 217 328 31 0 chrX 17782064 17782128 -148868168 - ID4_ SINE ID -10 73 8 4 720 31 44 0 0 chrX 17782145 17782190 -148868106 + AT_rich Low_complexity Low_complexity 1 45 0 4 720 222 372 51 0 chrX 17782532 17782610 -148867686 + B1F1 SINE Alu 2 83 -66 4 720 751 251 73 0 chrX 17782769 17782960 -148867336 - B3 SINE B2 -11 205 1 4 720 358 308 161 77 chrX 17784936 17785302 -148864994 - HAL1 LINE L1 -1341 1166 770 4 720 353 253 25 0 chrX 17786206 17786285 -148864011 - ID4_ SINE ID -2 81 1 4 720 637 192 16 40 chrX 17786353 17786478 -148863818 - B1_Mur4 SINE Alu -28 122 1 4 720 266 354 52 39 chrX 17786478 17786512 -148863784 - B4 SINE B4 -207 85 50 4 720 689 272 86 27 chrX 17786513 17786849 -148863447 - L1M2 LINE L1 -976 5167 4812 4 720 625 242 174 12 chrX 17786887 17787209 -148863087 - L1M2 LINE L1 -1402 4741 4368 4 720 870 326 18 3 chrX 17787288 17787574 -148862722 - B4A SINE B4 -2 290 1 4 720 2660 199 132 34 chrX 17787656 17788396 -148861900 - RLTR40 LTR ERVK -4 813 1 4 720 204 40 0 0 chrX 17788450 17788475 -148861821 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 4 720 1206 93 0 6 chrX 17788481 17788653 -148861643 - B2_Mm2 SINE B2 -23 172 2 4 720 347 314 32 1 chrX 17788662 17788800 -148861496 - L1M2 LINE L1 -1845 4301 4157 4 720 343 265 0 24 chrX 17788996 17789081 -148861215 + ID4_ SINE ID 1 83 0 4 720 339 260 133 86 chrX 17789766 17789976 -148860320 - RMER15 LTR ERVL -2 573 354 4 720 272 397 7 21 chrX 17790004 17790148 -148860148 - Lx8 LINE L1 -299 7174 7033 4 720 560 292 13 30 chrX 17790161 17790394 -148859902 - L1MC1 LINE L1 -133 6200 5972 4 720 200 167 0 0 chrX 17790406 17790436 -148859860 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 720 198 221 88 38 chrX 17790466 17790546 -148859750 + L3 LINE CR1 716 799 -3690 4 720 575 167 184 0 chrX 17790889 17791003 -148859293 - B1_Mur4 SINE Alu -15 135 1 4 720 864 267 26 0 chrX 17791003 17791235 -148859061 - L1MA4 LINE L1 -382 5918 5681 4 720 1032 186 50 0 chrX 17791244 17791443 -148858853 + URR1B DNA MER1_type 2 210 -15 4 720 481 198 9 45 chrX 17791583 17791694 -148858602 - B1_Mur2 SINE Alu 0 149 43 4 720 265 348 91 14 chrX 17791753 17791896 -148858400 + MIRb SINE MIR 26 179 -89 4 720 22 0 0 0 chrX 17792739 17792761 -148857535 + AT_rich Low_complexity Low_complexity 1 22 0 4 720 629 359 29 18 chrX 17792781 17793059 -148857237 + LTR16C LTR ERVL 199 479 -10 4 720 1104 57 0 0 chrX 17793476 17793616 -148856680 + B1_Mus2 SINE Alu 1 140 -7 4 720 356 306 31 0 chrX 17794469 17794567 -148855729 - B1F2 SINE Alu -25 124 24 4 720 990 214 270 7 chrX 17794611 17794907 -148855389 - ORR1D1 LTR MaLR 0 374 1 4 720 232 195 33 109 chrX 17795201 17795293 -148855003 - PB1D9 SINE Alu -22 98 14 4 720 243 305 129 48 chrX 17795318 17795359 -148854937 - ID_B1 SINE B4 -1 223 90 4 720 388 301 0 0 chrX 17795359 17795442 -148854854 - PB1D7 SINE Alu -29 91 9 4 720 876 152 0 0 chrX 17795840 17795991 -148854305 + CT-rich Low_complexity Low_complexity 2 152 0 4 720 1180 115 0 11 chrX 17796121 17796297 -148853999 - B2_Mm2 SINE B2 -19 176 3 4 720 186 167 0 0 chrX 17797468 17797504 -148852792 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 720 700 256 9 54 chrX 17797991 17798214 -148852082 - ID_B1 SINE B4 -1 223 11 4 720 227 275 0 91 chrX 17798139 17798227 -148852069 - ID4_ SINE ID -2 81 2 4 720 537 238 208 11 chrX 17799037 17799220 -148851076 - ID_B1 SINE B4 -3 221 3 4 720 23 0 0 0 chrX 17799387 17799410 -148850886 + AT_rich Low_complexity Low_complexity 1 23 0 4 720 250 26 51 0 chrX 17800353 17800392 -148849904 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 4 720 491 276 65 0 chrX 17802066 17802189 -148848107 + RSINE1 SINE B4 35 165 0 4 720 198 0 0 0 chrX 17802293 17802315 -148847981 + (TTG)n Simple_repeat Simple_repeat 2 23 0 4 720 919 139 198 23 chrX 17802516 17802693 -148847603 + B3 SINE B2 1 208 -8 4 720 443 343 74 42 chrX 17803029 17803312 -148846984 - B4A SINE B4 0 292 1 4 720 24 0 0 0 chrX 17803396 17803420 -148846876 + AT_rich Low_complexity Low_complexity 1 24 0 4 720 259 358 62 62 chrX 17803541 17803702 -148846594 + MIRb SINE MIR 26 186 -82 4 720 230 237 87 24 chrX 17803770 17803872 -148846424 - PB1D10 SINE Alu -11 109 1 4 720 185 0 0 39 chrX 17803911 17803937 -148846359 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 4 720 308 250 97 0 chrX 17803974 17804046 -148846250 - ID_B1 SINE B4 0 224 146 4 720 781 237 57 16 chrX 17804069 17804262 -148846034 - B3 SINE B2 -9 207 7 4 720 622 330 0 43 chrX 17805018 17805202 -148845094 + B3A SINE B2 7 182 -16 4 720 339 296 34 0 chrX 17805285 17805373 -148844923 - RSINE1 SINE B4 -31 134 44 4 720 325 320 9 55 chrX 17805907 17806016 -148844280 - PB1D10 SINE Alu -13 104 1 4 720 255 170 0 0 chrX 17807019 17807066 -148843230 + T-rich Low_complexity Low_complexity 1 47 0 4 720 1072 62 28 0 chrX 17807074 17807218 -148843078 - B1_Mus1 SINE Alu 0 148 1 4 720 1112 135 32 16 chrX 17807865 17808053 -148842243 + B2_Mm2 SINE B2 2 192 -3 4 720 768 179 0 0 chrX 17808266 17808417 -148841879 + (TA)n Simple_repeat Simple_repeat 2 152 0 4 720 879 172 0 0 chrX 17808930 17809093 -148841203 + CT-rich Low_complexity Low_complexity 2 164 0 4 720 4542 68 8 7 chrX 17809460 17810054 -148840242 + L1Md_F2 LINE L1 5982 6576 -6 4 720 203 0 37 0 chrX 17810784 17810811 -148839485 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 720 22 35 0 0 chrX 17811597 17811626 -148838670 + AT_rich Low_complexity Low_complexity 1 29 0 4 720 21 0 0 0 chrX 17812147 17812168 -148838128 + AT_rich Low_complexity Low_complexity 1 21 0 4 720 256 265 15 0 chrX 17813169 17813237 -148837059 + GA-rich Low_complexity Low_complexity 2 70 0 4 720 37 62 0 0 chrX 17813313 17813378 -148836918 + AT_rich Low_complexity Low_complexity 1 65 0 4 720 414 0 0 0 chrX 17814155 17814201 -148836095 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 720 339 247 118 0 chrX 17814240 17814333 -148835963 - B3A SINE B2 -89 109 6 5 720 21 0 0 0 chrX 17815637 17815658 -148834638 + AT_rich Low_complexity Low_complexity 1 21 0 5 720 878 233 156 80 chrX 17816695 17817021 -148833275 - ORR1D2 LTR MaLR 0 378 28 5 720 189 94 0 0 chrX 17817569 17817601 -148832695 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 5 720 198 0 0 0 chrX 17817875 17817897 -148832399 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 5 720 327 234 0 0 chrX 17817910 17817974 -148832322 - B3 SINE B2 -25 191 128 5 720 431 211 0 0 chrX 17817976 17818047 -148832249 + B1_Mm SINE Alu 21 91 -56 5 720 459 298 7 88 chrX 17818063 17818199 -148832097 - B3 SINE B2 -82 134 10 5 720 384 88 0 0 chrX 17819543 17819600 -148830696 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 720 988 286 41 137 chrX 17819740 17819987 -148830309 - Lx8 LINE L1 -681 7015 6785 5 720 1024 93 0 0 chrX 17819987 17820127 -148830169 + B1_Mus1 SINE Alu 1 140 -8 5 720 1031 286 41 137 chrX 17820127 17820462 -148829834 - Lx8 LINE L1 -687 6786 6489 5 720 259 225 24 203 chrX 17820578 17820701 -148829595 + MER20 DNA MER1_type 90 190 -29 5 720 23 0 0 0 chrX 17821899 17821922 -148828374 + AT_rich Low_complexity Low_complexity 1 23 0 5 720 425 250 19 39 chrX 17822287 17822391 -148827905 + PB1D9 SINE Alu 3 104 -16 5 720 33 85 0 0 chrX 17825208 17825290 -148825006 + AT_rich Low_complexity Low_complexity 1 82 0 5 11 1644 280 101 15 chrX 17825776 17826320 -148823976 + Tigger7 DNA MER2_type 24 614 -1877 5 721 23 68 0 0 chrX 17826442 17826486 -148823810 + AT_rich Low_complexity Low_complexity 1 44 0 5 721 238 352 0 21 chrX 17827450 17827543 -148822753 - PB1D10 SINE Alu -26 91 1 5 721 1183 185 230 3 chrX 17828864 17829151 -148821145 - ORR1C1 LTR MaLR -26 352 1 5 721 228 263 153 101 chrX 17829464 17829692 -148820604 - L2 LINE L2 -1488 1931 1692 5 721 315 291 11 34 chrX 17829921 17830010 -148820286 + PB1D10 SINE Alu 30 116 -1 5 721 24 32 0 0 chrX 17833008 17833039 -148817257 + AT_rich Low_complexity Low_complexity 1 31 0 5 721 264 331 51 91 chrX 17833168 17833188 -148817108 - B4 SINE B4 -54 238 173 5 721 428 234 133 31 chrX 17833188 17833316 -148816980 - B1_Mur1 SINE Alu -3 146 6 5 721 264 331 51 91 chrX 17833316 17833344 -148816952 - B4 SINE B4 -54 172 70 5 721 26 30 0 0 chrX 17833357 17833390 -148816906 + AT_rich Low_complexity Low_complexity 1 33 0 5 721 2084 234 61 106 chrX 17835473 17836457 -148813839 - RMER17B LTR ERVK -47 911 11 5 721 880 193 155 0 chrX 17836635 17836816 -148813480 + B3 SINE B2 1 209 -7 5 721 1045 49 0 47 chrX 17837021 17837171 -148813125 - B1_Mus1 SINE Alu -4 144 2 5 721 594 249 219 0 chrX 17837350 17837615 -148812681 - L1MB2 LINE L1 -22 6149 5827 5 721 330 278 0 13 chrX 17837713 17837801 -148812495 - ID2 SINE ID -60 92 6 5 721 489 241 77 53 chrX 17837895 17838077 -148812219 - B3A SINE B2 -9 184 2 5 721 322 245 73 21 chrX 17838102 17838198 -148812098 - PB1D9 SINE Alu -19 101 1 5 721 338 150 325 0 chrX 17839785 17839865 -148810431 - MER20 DNA MER1_type 0 219 114 5 721 22 0 0 0 chrX 17840139 17840161 -148810135 + AT_rich Low_complexity Low_complexity 1 22 0 5 721 1833 169 124 13 chrX 17840502 17840874 -148809422 - MTC LTR MaLR -8 413 1 5 721 21 0 0 0 chrX 17841468 17841489 -148808807 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 1130 56 14 0 chrX 17842140 17842283 -148808013 + B1_Mm SINE Alu 2 146 -1 5 721 315 0 0 0 chrX 17842958 17842993 -148807303 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 721 407 378 13 44 chrX 17843088 17843246 -148807050 - RSINE1 SINE B4 -12 153 1 5 721 26 30 0 0 chrX 17843377 17843410 -148806886 + AT_rich Low_complexity Low_complexity 1 33 0 5 721 25 31 0 0 chrX 17843549 17843581 -148806715 + AT_rich Low_complexity Low_complexity 1 32 0 5 721 23 68 0 0 chrX 17843679 17843723 -148806573 + AT_rich Low_complexity Low_complexity 1 44 0 5 721 1295 117 23 32 chrX 17843922 17844143 -148806153 - Lx2 LINE L1 -4 6993 6775 5 721 4210 120 27 21 chrX 17844143 17844808 -148805488 - Lx2 LINE L1 -363 6634 5966 5 721 295 289 0 0 chrX 17845313 17845396 -148804900 - L1MB4 LINE L1 -6429 178 96 5 721 495 259 155 23 chrX 17845480 17845654 -148804642 - B3A SINE B2 0 198 2 5 721 986 103 20 20 chrX 17845682 17845830 -148804466 + B1_Mus1 SINE Alu 1 148 0 5 721 454 241 45 7 chrX 17847752 17847867 -148802429 - RSINE1 SINE B4 -176 116 1 5 721 203 0 37 0 chrX 17847915 17847942 -148802354 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 5 721 216 0 0 0 chrX 17848896 17848920 -148801376 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 721 509 273 157 10 chrX 17849495 17849720 -148800576 + MIRb SINE MIR 3 260 -8 5 721 964 148 14 0 chrX 17849764 17849906 -148800390 + B1_Mur4 SINE Alu 1 144 -6 5 721 207 246 0 0 chrX 17849927 17849984 -148800312 + (TA)n Simple_repeat Simple_repeat 1 57 0 5 721 27 49 0 0 chrX 17850681 17850722 -148799574 + AT_rich Low_complexity Low_complexity 1 41 0 5 721 223 250 23 70 chrX 17851439 17851525 -148798771 - MIRc SINE MIR -109 159 78 5 721 27 29 0 0 chrX 17851540 17851574 -148798722 + AT_rich Low_complexity Low_complexity 1 34 0 5 721 1166 144 27 0 chrX 17851633 17851820 -148798476 - B2_Mm2 SINE B2 -2 193 2 5 721 222 305 60 24 chrX 17851868 17851952 -148798344 + PB1 SINE Alu 1 87 -40 5 721 1314 154 18 26 chrX 17853282 17853508 -148796788 - URR1B DNA MER1_type -1 224 1 5 721 222 258 81 126 chrX 17854019 17854130 -148796166 - L2c LINE L2 0 3387 3282 5 721 21 36 0 0 chrX 17856327 17856355 -148793941 + AT_rich Low_complexity Low_complexity 1 28 0 5 721 199 167 30 0 chrX 17856717 17856783 -148793513 + (TA)n Simple_repeat Simple_repeat 1 68 0 5 721 270 81 0 0 chrX 17857250 17857287 -148793009 + (T)n Simple_repeat Simple_repeat 1 37 0 5 721 302 314 116 0 chrX 17858973 17859059 -148791237 - B1F1 SINE Alu -53 96 1 5 721 241 316 0 0 chrX 17859009 17859066 -148791230 - B4 SINE B4 -157 135 79 5 721 278 289 163 16 chrX 17859714 17859837 -148790459 + RSINE1 SINE B4 3 143 -22 5 721 187 364 48 40 chrX 17859998 17860124 -148790172 - MIR SINE MIR -117 145 19 5 721 499 229 21 0 chrX 17860447 17860543 -148789753 + B1_Mus1 SINE Alu 1 98 -50 5 721 323 337 12 0 chrX 17860542 17860625 -148789671 - B4A SINE B4 -208 84 1 5 721 643 257 10 91 chrX 17860775 17860972 -148789324 + B3A SINE B2 2 182 -16 5 721 689 339 35 13 chrX 17861222 17861449 -148788847 - B4A SINE B4 -60 232 1 5 721 22 0 0 0 chrX 17862082 17862104 -148788192 + AT_rich Low_complexity Low_complexity 1 22 0 5 721 329 313 96 7 chrX 17862419 17862554 -148787742 + RMER15 LTR ERVL 275 421 -154 5 721 23 0 0 0 chrX 17862719 17862742 -148787554 + AT_rich Low_complexity Low_complexity 1 23 0 5 721 262 292 31 0 chrX 17863316 17863381 -148786915 - ID_B1 SINE B4 -67 157 91 5 721 501 202 332 59 chrX 17863568 17863857 -148786439 - RLTR9A LTR ERVK 0 368 1 5 721 1352 85 16 5 chrX 17864156 17864345 -148785951 - B2_Mm2 SINE B2 -4 191 1 5 721 2635 192 36 40 chrX 17864573 17864992 -148785304 - RMER16-int LTR ERVK -1540 3866 3603 5 721 4528 98 30 50 chrX 17864992 17865758 -148784538 + RMER17A LTR ERVK 1 751 0 5 721 2635 135 31 35 chrX 17865758 17865982 -148784314 - RMER16-int LTR ERVK -1804 3602 3384 5 721 32242 25 0 0 chrX 17865984 17870453 -148779843 - L1Md_T LINE L1 0 6582 2114 5 721 4328 20 2 0 chrX 17870453 17870945 -148779351 - MT2_Mm LTR ERVL 0 493 1 5 721 314 0 0 0 chrX 17870945 17870983 -148779313 - MERVL-int LTR ERVL 0 5485 5448 5 721 375 179 46 35 chrX 17870983 17871070 -148779226 - ORR1A3-int LTR MaLR -1323 640 553 5 721 47379 15 6 0 chrX 17871070 17876396 -148773900 - MERVL-int LTR ERVL -125 5360 1 5 721 4328 20 2 0 chrX 17876396 17876888 -148773408 - MT2_Mm LTR ERVL 0 493 1 5 721 8370 40 5 20 chrX 17876888 17878842 -148771454 - L1Md_A LINE L1 -3766 2117 198 5 721 5260 103 57 16 chrX 17878842 17879680 -148770616 - RMER16-int LTR ERVK -2010 3396 2524 5 721 4336 20 2 0 chrX 17879680 17880172 -148770124 - MT2_Mm LTR ERVL 0 493 1 5 721 314 0 0 0 chrX 17880172 17880210 -148770086 - MERVL-int LTR ERVL 0 5485 5448 5 721 392 167 46 35 chrX 17880210 17880297 -148769999 - ORR1A3-int LTR MaLR -1323 640 553 5 721 47420 14 6 0 chrX 17880297 17885614 -148764682 - MERVL-int LTR ERVL -125 5360 1 5 721 4336 20 2 0 chrX 17885623 17886115 -148764181 - MT2_Mm LTR ERVL 0 493 1 5 721 4604 127 55 47 chrX 17886115 17886554 -148763742 - RMER16-int LTR ERVK -2877 2529 2075 5 721 207 0 0 0 chrX 17886564 17886587 -148763709 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 721 1160 42 0 27 chrX 17886587 17886722 -148763574 - B1_Mm SINE Alu -13 134 1 5 721 4604 127 55 47 chrX 17886722 17887008 -148763288 - RMER16-int LTR ERVK -3332 2074 1799 5 721 2832 66 45 10 chrX 17887008 17887405 -148762891 - RLTR10A LTR ERVK 0 411 1 5 721 4604 221 102 108 chrX 17887405 17888367 -148761929 - RMER16-int LTR ERVK -3179 2629 1675 5 721 3128 81 34 5 chrX 17888367 17888776 -148761520 - BGLII LTR ERVK 0 421 1 5 721 2504 180 121 61 chrX 17888776 17889452 -148760844 - RMER16-int LTR ERVK -5708 1698 1074 5 721 432 0 0 0 chrX 17889452 17889500 -148760796 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 721 255 41 40 20 chrX 17889589 17889639 -148760657 + (TTTTTG)n Simple_repeat Simple_repeat 4 54 0 5 721 826 256 92 25 chrX 17890033 17890317 -148759979 - RLTR9A LTR ERVK -63 305 3 5 721 259 227 40 108 chrX 17890586 17890660 -148759636 + PB1D9 SINE Alu 1 71 -49 5 721 497 194 21 0 chrX 17891049 17891142 -148759154 + B1_Mur1 SINE Alu 55 149 0 5 721 918 180 0 0 chrX 17891142 17891320 -148758976 + GA-rich Low_complexity Low_complexity 3 180 0 5 721 2918 121 37 35 chrX 17891906 17892387 -148757909 - RLTR45 LTR ERVK 0 482 1 5 721 7479 35 0 0 chrX 17892387 17893231 -148757065 - RLTR45-int LTR ERVK 0 7244 6401 5 721 239 312 45 60 chrX 17893231 17893364 -148756932 + LTR50 LTR ERVL 136 266 -529 5 721 576 328 41 41 chrX 17893364 17893780 -148756516 - RNERVK23-int LTR ERVK -673 7544 7129 5 721 3625 79 18 32 chrX 17893869 17894366 -148755930 - RLTR45-int LTR ERVK -5596 1648 1159 5 721 1564 104 64 4 chrX 17894530 17894780 -148755516 - RLTR45-int LTR ERVK -6067 1177 913 5 721 1892 32 0 5 chrX 17894905 17895125 -148755171 - RLTR45-int LTR ERVK -6334 910 692 5 721 1131 49 0 40 chrX 17895482 17895632 -148754664 - RLTR45-int LTR ERVK -6552 692 549 5 721 3419 87 95 34 chrX 17896416 17896954 -148753342 - RLTR45-int LTR ERVK -6673 571 1 5 721 2604 137 78 37 chrX 17896954 17897417 -148752879 - RLTR45 LTR ERVK 0 482 1 5 721 4656 123 68 25 chrX 17897570 17898345 -148751951 - RMER17D2 LTR ERVK 0 809 1 5 721 470 146 79 50 chrX 17898415 17898516 -148751780 - RMER17C LTR ERVK -3 407 304 5 721 907 219 133 36 chrX 17898523 17898628 -148751668 + RMER17C LTR ERVK 17 179 -231 5 721 591 15 0 0 chrX 17898628 17898696 -148751600 + (TTCCC)n Simple_repeat Simple_repeat 3 70 0 5 721 657 63 0 0 chrX 17898702 17898797 -148751499 + (TCTCTG)n Simple_repeat Simple_repeat 2 96 0 6 721 387 0 0 0 chrX 17898798 17898841 -148751455 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 721 907 174 178 25 chrX 17898841 17899022 -148751274 + RMER17C LTR ERVK 186 403 -7 5 721 1242 152 80 69 chrX 17899022 17899298 -148750998 + RMER17C-int LTR ERVK 1 279 -2959 5 721 1474 201 115 70 chrX 17899342 17899758 -148750538 + RMER17C-int LTR ERVK 264 698 -2540 5 721 252 0 0 0 chrX 17899758 17899786 -148750510 + (CTG)n Simple_repeat Simple_repeat 3 30 0 6 721 571 123 75 9 chrX 17900458 17900565 -148749731 + RMER17C-int LTR ERVK 1338 1451 -1787 5 721 1010 92 0 0 chrX 17900568 17900688 -148749608 - 5S rRNA rRNA -1 120 1 6 721 3612 120 64 34 chrX 17900701 17901284 -148749012 - RLTR13C2 LTR ERVK 0 808 206 6 721 527 29 14 0 chrX 17901284 17901353 -148748943 + (TA)n Simple_repeat Simple_repeat 1 70 0 6 721 3612 120 64 34 chrX 17901353 17901399 -148748897 - RLTR13C2 LTR ERVK -603 205 160 6 721 2089 216 58 117 chrX 17901399 17902023 -148748273 + LTRIS_Mus LTR ERV1 1 587 0 6 721 1159 86 6 30 chrX 17902023 17902130 -148748166 - RLTR13C2 LTR ERVK -644 164 59 6 721 3628 86 40 58 chrX 17902130 17902651 -148747645 - RLTR1B LTR ERV1 0 512 1 6 721 1159 86 6 30 chrX 17902651 17902711 -148747585 - RLTR13C2 LTR ERVK -750 58 1 6 721 8420 122 127 84 chrX 17902712 17903390 -148746906 + RMER17C-int LTR ERVK 1446 2157 -1081 5 721 4508 42 10 4 chrX 17903390 17903899 -148746397 + RLTR1B LTR ERV1 1 512 0 6 721 8420 122 127 84 chrX 17903899 17904207 -148746089 + RMER17C-int LTR ERVK 2158 2466 -772 5 721 2420 211 39 13 chrX 17904207 17904750 -148745546 + RLTR31_Mm LTR ERVK 1 557 -4 6 721 8420 122 127 84 chrX 17904750 17904836 -148745460 + RMER17C-int LTR ERVK 2467 2582 -656 5 721 231 310 45 22 chrX 17904836 17904925 -148745371 - LSU-rRNA_Hsa rRNA rRNA -789 4246 4156 6 721 8420 122 127 84 chrX 17904925 17905140 -148745156 + RMER17C-int LTR ERVK 2583 2877 -361 5 721 414 0 0 0 chrX 17905140 17905186 -148745110 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 721 8420 122 127 84 chrX 17905186 17905505 -148744791 + RMER17C-int LTR ERVK 2878 3216 -22 5 721 1016 38 0 30 chrX 17905507 17905642 -148744654 - B1_Mm SINE Alu 0 147 17 6 721 1960 171 64 13 chrX 17905681 17906071 -148744225 + RMER17C LTR ERVK 1 410 0 5 721 1000 191 127 39 chrX 17906071 17906174 -148744122 - RMER17C LTR ERVK -102 308 212 6 721 261 57 0 0 chrX 17906174 17906209 -148744087 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 6 721 1000 191 127 39 chrX 17906209 17906388 -148743908 - RMER17C LTR ERVK -199 211 3 6 721 349 250 93 57 chrX 17906662 17906802 -148743494 + RLTR23 LTR ERV1 286 430 0 6 721 186 43 0 0 chrX 17906956 17906979 -148743317 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 721 343 241 29 29 chrX 17907055 17907192 -148743104 + T-rich Low_complexity Low_complexity 1 137 0 6 721 650 303 14 62 chrX 17907274 17907482 -148742814 - B3A SINE B2 0 198 1 6 721 2179 160 52 3 chrX 17907625 17907989 -148742307 + RLTR14 LTR ERV1 1 382 0 6 721 1722 207 150 31 chrX 17908243 17908696 -148741600 + RLTR11A LTR ERVK 1 507 -21 6 721 1193 75 7 0 chrX 17908696 17908842 -148741454 + B1_Mus1 SINE Alu 2 148 0 6 721 1354 176 42 0 chrX 17909040 17909256 -148741040 - URR1A DNA MER1_type 0 226 2 6 721 1143 320 91 52 chrX 17909469 17910906 -148739390 + L1M2 LINE L1 1547 3047 -3096 6 721 617 222 0 60 chrX 17910922 17911056 -148739240 + B1_Mur1 SINE Alu 23 148 -1 6 721 507 158 90 26 chrX 17911167 17911323 -148738973 + RMER17C LTR ERVK 110 275 -135 6 721 366 232 118 57 chrX 17911324 17911539 -148738757 + L1M2 LINE L1 3115 3337 -2806 6 721 679 254 20 88 chrX 17911543 17911837 -148738459 + L1M2 LINE L1 3773 4046 -2097 6 721 622 213 8 32 chrX 17911873 17911999 -148738297 + B1_Mur2 SINE Alu 27 149 0 6 721 235 316 90 0 chrX 17912079 17912234 -148738062 + L1M2 LINE L1 4103 4271 -1869 6 721 376 311 22 7 chrX 17912270 17912406 -148737890 - Lx8 LINE L1 -332 7141 7004 6 721 3069 18 0 43 chrX 17912406 17912758 -148737538 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 721 31656 22 29 3 chrX 17912758 17916377 -148733919 + IAPEz-int LTR ERVK 8 3717 -2764 6 721 9133 25 2 5 chrX 17916376 17917415 -148732881 + IAPEz-int LTR ERVK 5446 6481 0 6 721 3069 18 0 43 chrX 17917415 17917767 -148732529 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 721 964 312 89 3 chrX 17917767 17918117 -148732179 - Lx8 LINE L1 -464 7009 6630 6 721 499 271 47 6 chrX 17918117 17918288 -148732008 - L1MEc LINE L1 -5619 781 604 6 721 3136 76 2 89 chrX 17918534 17918682 -148731614 - BGLII LTR ERVK 0 421 279 6 721 1325 34 0 0 chrX 17918682 17918828 -148731468 + B1_Mm SINE Alu 2 147 0 6 721 3136 76 2 89 chrX 17918828 17919140 -148731156 - BGLII LTR ERVK -143 278 1 6 721 222 128 0 0 chrX 17919703 17919742 -148730554 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 721 203 250 0 0 chrX 17920151 17920199 -148730097 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 721 307 280 0 57 chrX 17920200 17920306 -148729990 - B3A SINE B2 -98 100 1 6 721 233 289 86 66 chrX 17920397 17920549 -148729747 - RMER12 LTR ERVK -47 1275 1121 6 721 259 244 0 126 chrX 17920740 17920843 -148729453 - RLTR22_Mur LTR ERVK -139 1709 1620 6 721 2474 219 164 57 chrX 17921197 17922079 -148728217 - RLTR22_Mur LTR ERVK -724 1124 136 6 721 325 0 44 0 chrX 17922079 17922124 -148728172 + (TA)n Simple_repeat Simple_repeat 1 47 0 6 721 2474 219 164 57 chrX 17922124 17922256 -148728040 - RLTR22_Mur LTR ERVK -1713 135 2 6 721 54 0 0 0 chrX 17922674 17922728 -148727568 + AT_rich Low_complexity Low_complexity 1 54 0 6 721 3270 304 48 30 chrX 17922793 17922945 -148727351 - Lx9 LINE L1 -146 7498 7343 6 721 1856 195 60 3 chrX 17922945 17923295 -148727001 + ORR1D2 LTR MaLR 1 370 0 6 721 3270 304 48 30 chrX 17923295 17924294 -148726002 - Lx9 LINE L1 -302 7342 6327 6 721 4181 94 2 0 chrX 17924312 17924843 -148725453 - L1_Mus1 LINE L1 -1 6566 6035 6 721 25798 101 11 14 chrX 17924843 17925082 -148725214 - L1VL1 LINE L1 -873 5010 4778 6 721 2868 66 43 58 chrX 17925082 17925499 -148724797 - RLTR10A LTR ERVK 0 411 1 6 721 25798 94 13 11 chrX 17925499 17930030 -148720266 - L1VL1 LINE L1 -1106 4777 231 6 721 22 56 0 0 chrX 17931149 17931185 -148719111 + AT_rich Low_complexity Low_complexity 1 36 0 6 721 1152 216 29 0 chrX 17931185 17931393 -148718903 - B3 SINE B2 0 216 3 6 721 545 221 37 136 chrX 17931614 17931776 -148718520 + MTE2a LTR MaLR 1 146 -233 6 721 276 178 0 0 chrX 17931808 17931881 -148718415 + A-rich Low_complexity Low_complexity 1 73 0 6 721 828 235 23 78 chrX 17931884 17932079 -148718217 + MTE2a LTR MaLR 174 356 -23 6 721 1685 250 27 14 chrX 17932079 17932444 -148717852 + ORR1D2 LTR MaLR 1 370 0 6 721 828 235 23 78 chrX 17932444 17932465 -148717831 + MTE2a LTR MaLR 357 378 -1 6 721 4658 205 26 73 chrX 17932585 17933021 -148717275 + Lx9 LINE L1 4753 5219 -2425 6 721 292 109 0 21 chrX 17933021 17933068 -148717228 + RMER17A2 LTR ERVK 1 46 -860 6 721 4658 205 26 73 chrX 17933068 17933979 -148716317 + Lx9 LINE L1 5220 6198 -1446 6 721 2567 95 3 0 chrX 17933979 17934305 -148715991 - ORR1A2 LTR MaLR 0 327 1 6 721 3013 211 101 35 chrX 17934305 17934943 -148715353 + Lx9 LINE L1 6199 6908 -736 6 721 2275 111 12 18 chrX 17935201 17935530 -148714766 + ORR1A4 LTR MaLR 1 327 -2 6 721 235 197 0 134 chrX 17935703 17935785 -148714511 + Lx9 LINE L1 6905 6975 -669 6 721 261 280 0 0 chrX 17936234 17936309 -148713987 - RLTR24 LTR ERV1 -454 75 1 6 721 422 288 48 126 chrX 17936309 17936579 -148713717 - RMER10A LTR ERVL -72 370 122 6 721 2507 136 12 31 chrX 17936619 17937036 -148713260 - RLTR9E LTR ERVK 0 409 1 6 721 476 84 56 14 chrX 17937036 17937108 -148713188 - ETnERV2-int LTR ERVK -1 7405 7331 6 721 7080 84 41 9 chrX 17937324 17938501 -148711795 - ETnERV2-int LTR ERVK -984 6422 5293 6 721 39863 35 0 0 chrX 17938501 17943914 -148706382 - L1Md_T LINE L1 0 6582 1170 6 721 5169 148 27 33 chrX 17943920 17944917 -148705379 - L1Md_T LINE L1 -5411 1205 215 6 721 14978 116 24 4 chrX 17944917 17947049 -148703247 - ETnERV2-int LTR ERVK -2103 5303 3131 6 721 888 38 0 0 chrX 17947384 17947490 -148702806 - L1Md_F3 LINE L1 -776 5808 5703 6 721 6626 34 5 4 chrX 17947490 17948238 -148702058 + L1Md_F3 LINE L1 5835 6583 -1 6 721 1276 207 81 133 chrX 17948245 17948732 -148701564 - ETnERV2-int LTR ERVK -2168 3969 3600 6 721 1659 220 48 53 chrX 17948732 17949130 -148701166 + RMER10B LTR ERVL 1 396 -2 6 721 1276 190 90 137 chrX 17949130 17949288 -148701008 - ETnERV2-int LTR ERVK -2538 3599 3454 6 721 471 190 132 138 chrX 17949303 17949462 -148700834 + Lx9 LINE L1 6972 7129 -515 6 721 285 189 0 0 chrX 17949554 17949649 -148700647 + (TG)n Simple_repeat Simple_repeat 2 96 0 6 721 489 76 0 0 chrX 17949652 17949718 -148700578 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 6 721 280 208 37 49 chrX 17949722 17949803 -148700493 + RMER10B LTR ERVL 228 307 -91 6 721 374 0 22 0 chrX 17949806 17949852 -148700444 + (TCTA)n Simple_repeat Simple_repeat 1 47 0 6 721 342 45 0 0 chrX 17949852 17949896 -148700400 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 721 304 221 47 39 chrX 17949900 17950027 -148700269 + Lx9 LINE L1 7517 7644 0 6 721 452 236 0 43 chrX 17950122 17950215 -148700081 + RSINE1 SINE B4 1 89 -76 6 721 296 284 203 39 chrX 17950406 17950534 -148699762 + B3 SINE B2 1 149 -67 6 721 396 55 0 0 chrX 17950535 17950590 -148699706 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 721 614 231 114 86 chrX 17950960 17951310 -148698986 - RLTR9A LTR ERVK -8 360 1 6 721 684 261 113 11 chrX 17951311 17951497 -148698799 - B3 SINE B2 -11 205 1 6 721 23 0 0 0 chrX 17951839 17951862 -148698434 + AT_rich Low_complexity Low_complexity 1 23 0 6 721 960 239 21 63 chrX 17951984 17952270 -148698026 - Lx9 LINE L1 -489 7155 6882 6 721 650 149 18 13 chrX 17952561 17952697 -148697599 + B2_Mm2 SINE B2 46 192 -3 6 721 2094 172 66 121 chrX 17952700 17953203 -148697093 - RLTR18 LTR ERVK -141 475 1 6 721 797 254 162 47 chrX 17953203 17953404 -148696892 - RLTR18B LTR ERVK -71 441 205 6 721 2666 102 30 68 chrX 17953404 17953802 -148696494 - RLTR9A2 LTR ERVK 0 383 1 6 721 797 254 162 47 chrX 17953802 17953897 -148696399 - RLTR18B LTR ERVK -308 204 111 6 721 593 241 121 48 chrX 17954007 17954173 -148696123 - RLTR18B LTR ERVK -438 178 1 6 721 1911 201 58 65 chrX 17954176 17954792 -148695504 - L1_Rod LINE L1 -946 4901 4290 6 721 514 199 200 27 chrX 17954777 17954927 -148695369 + RMER1C Other Other 1165 1340 -2 6 721 482 177 85 78 chrX 17954923 17955076 -148695220 - L1_Rod LINE L1 -1554 4293 4140 6 721 867 97 0 0 chrX 17955076 17955190 -148695106 - B1_Mus2 SINE Alu -32 115 2 6 721 270 257 21 35 chrX 17955190 17955225 -148695071 - ORR1B1-int LTR MaLR -861 648 616 6 721 234 0 0 0 chrX 17955251 17955277 -148695019 + (A)n Simple_repeat Simple_repeat 1 26 0 6 721 497 198 0 0 chrX 17955320 17955406 -148694890 - B3 SINE B2 -129 87 2 6 721 1377 196 70 48 chrX 17955410 17955768 -148694528 - L1_Rod LINE L1 -1868 3979 3614 6 721 1230 118 34 64 chrX 17956118 17956353 -148693943 + LTRIS2 LTR ERV1 337 564 0 6 721 1668 211 74 19 chrX 17956362 17956687 -148693609 - L1_Rod LINE L1 -2262 3585 3250 6 721 898 68 22 8 chrX 17956687 17956821 -148693475 + (TTTTC)n Simple_repeat Simple_repeat 2 137 0 6 90 1668 211 74 19 chrX 17956821 17956925 -148693371 - L1_Rod LINE L1 -2598 3249 3134 6 722 498 67 13 0 chrX 17956971 17957046 -148693250 - L1_Mus3 LINE L1 -5 6633 6558 6 722 27 81 0 0 chrX 17959099 17959161 -148691135 + AT_rich Low_complexity Low_complexity 1 62 0 6 722 342 0 0 0 chrX 17959603 17959641 -148690655 + (CCA)n Simple_repeat Simple_repeat 2 39 0 6 722 267 31 0 0 chrX 17959641 17959673 -148690623 + (TCC)n Simple_repeat Simple_repeat 2 33 0 6 722 228 213 0 0 chrX 17959827 17959888 -148690408 - L1M2 LINE L1 -2993 3150 3090 6 722 351 0 0 0 chrX 17959888 17959927 -148690369 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 6 722 7106 96 31 26 chrX 17959927 17960709 -148689587 - Lx LINE L1 -10 6644 5881 6 722 4554 21 0 0 chrX 17960709 17961191 -148689105 + LTRIS_Mm LTR ERV1 1 482 0 6 722 10290 96 31 26 chrX 17961191 17961372 -148688924 - Lx LINE L1 -774 5880 5674 6 722 2798 94 49 5 chrX 17961372 17961758 -148688538 + RLTR9D LTR ERVK 1 403 0 6 722 10290 157 76 14 chrX 17961758 17962967 -148687329 - Lx LINE L1 -210 5673 4420 6 722 3718 20 2 0 chrX 17962967 17963362 -148686934 - MTA_Mm LTR MaLR 0 396 1 6 722 9628 39 4 1 chrX 17963362 17964455 -148685841 - MTA_Mm-int LTR MaLR 0 1098 3 6 722 3743 18 2 0 chrX 17964457 17964852 -148685444 - MTA_Mm LTR MaLR 0 396 1 6 722 10290 157 76 14 chrX 17964852 17965078 -148685218 - Lx LINE L1 -1464 4419 4196 6 722 2117 206 40 187 chrX 17965078 17965784 -148684512 - RLTR1D LTR ERV1 0 605 4 6 722 10290 157 76 14 chrX 17965784 17966110 -148684186 - Lx LINE L1 -1688 4195 3791 6 722 2402 111 25 19 chrX 17966286 17966652 -148683644 + RLTR9A LTR ERVK 1 368 0 6 722 342 271 93 77 chrX 17966654 17966966 -148683330 + ETnERV2-int LTR ERVK 4 320 -2994 6 722 576 29 0 0 chrX 17967043 17967113 -148683183 + (GA)n Simple_repeat Simple_repeat 1 70 0 6 722 9312 157 53 55 chrX 17967117 17969050 -148681246 + ETnERV2-int LTR ERVK 1078 3005 -4401 6 722 5019 138 28 29 chrX 17969050 17969955 -148680341 + RMER17A2 LTR ERVK 3 906 0 6 722 4227 150 19 39 chrX 17969959 17970749 -148679547 + RMER16-int LTR ERVK 2413 3186 -2220 7 722 2789 137 51 37 chrX 17970749 17971235 -148679061 + Lx4A LINE L1 6566 7058 0 7 722 21 0 0 0 chrX 17971235 17971256 -148679040 + AT_rich Low_complexity Low_complexity 1 21 0 7 722 503 218 0 0 chrX 17971261 17971348 -148678948 - B3 SINE B2 -128 88 2 7 722 554 315 46 91 chrX 17971443 17971838 -148678458 - L1MEc LINE L1 -6002 398 22 7 722 938 293 114 60 chrX 17971853 17972318 -148677978 - RLTR19 LTR ERVK 0 499 10 7 722 864 226 7 0 chrX 17972373 17972519 -148677777 + B1_Mur1 SINE Alu 1 147 -2 7 722 1598 235 73 12 chrX 17972589 17972658 -148677638 - MTE2b LTR MaLR -12 367 300 7 722 1850 173 26 3 chrX 17972658 17972960 -148677336 + RLTR27 LTR ERVK 1 309 0 7 722 1598 235 73 12 chrX 17972960 17973234 -148677062 - MTE2b LTR MaLR -80 299 3 7 722 571 271 35 28 chrX 17973428 17973572 -148676724 - B1F2 SINE Alu -4 145 1 7 722 588 233 6 70 chrX 17974008 17974179 -148676117 + L1MA9 LINE L1 6004 6163 -149 7 722 960 263 26 46 chrX 17974194 17974544 -148675752 + RLTR15 LTR ERVK 1 343 -16 7 722 343 197 84 0 chrX 17974555 17974626 -148675670 + L1MA9 LINE L1 6182 6258 -54 7 722 288 0 0 0 chrX 17974669 17974701 -148675595 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 722 1639 175 85 9 chrX 17975002 17975319 -148674977 - MT2A LTR ERVL -190 343 3 7 722 428 243 206 0 chrX 17975471 17975578 -148674718 - ID_B1 SINE B4 -3 221 93 7 722 2470 164 102 8 chrX 17975805 17976285 -148674011 + RLTR11A2 LTR ERVK 3 527 0 7 722 357 348 15 7 chrX 17976446 17976582 -148673714 - ID_B1 SINE B4 -3 221 85 7 722 399 21 0 0 chrX 17976634 17976682 -148673614 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 722 3310 80 14 0 chrX 17976703 17977118 -148673178 + BGLII LTR ERVK 1 421 0 7 722 755 116 8 0 chrX 17977169 17977290 -148673006 + (GGAA)n Simple_repeat Simple_repeat 3 124 0 7 722 195 184 0 0 chrX 17977781 17977819 -148672477 + A-rich Low_complexity Low_complexity 1 38 0 7 722 333 0 0 0 chrX 17977915 17977952 -148672344 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 722 2416 157 26 85 chrX 17978261 17978807 -148671489 + Lx4B LINE L1 6433 6943 -115 7 722 248 311 26 39 chrX 17978887 17978964 -148671332 - PB1D10 SINE Alu 0 117 42 7 722 314 169 0 157 chrX 17979279 17979347 -148670949 - B1_Mus2 SINE Alu -13 134 78 7 722 2289 190 55 35 chrX 17979347 17979380 -148670916 - RLTR11A LTR ERVK 0 528 503 7 722 1332 157 25 131 chrX 17979380 17979740 -148670556 - RLTRETN_Mm LTR ERVK 0 322 1 7 722 2289 190 55 35 chrX 17979740 17980218 -148670078 - RLTR11A LTR ERVK -26 502 7 7 722 420 235 24 12 chrX 17980205 17980287 -148670009 - B1_Mur3 SINE Alu -63 86 4 7 722 815 168 15 0 chrX 17980291 17980428 -148669868 - B3 SINE B2 0 216 78 7 722 772 324 117 52 chrX 17980955 17981822 -148668474 - HAL1 LINE L1 -40 2467 1545 7 722 1397 279 142 45 chrX 17981864 17982042 -148668254 + L1MC4 LINE L1 6979 7180 -862 7 722 3458 41 21 0 chrX 17982042 17982430 -148667866 - MTA_Mm LTR MaLR 0 396 1 7 722 8867 69 6 5 chrX 17982430 17983527 -148666769 - MTA_Mm-int LTR MaLR 0 1098 1 7 722 3306 32 50 0 chrX 17983527 17983904 -148666392 - MTA_Mm LTR MaLR 0 396 1 7 722 1397 279 142 45 chrX 17983904 17984563 -148665733 + L1MC4 LINE L1 7181 7897 -145 7 722 233 254 15 0 chrX 17984676 17984743 -148665553 + L1MC4 LINE L1 7972 8039 -3 7 722 27 29 0 0 chrX 17985628 17985662 -148664634 + AT_rich Low_complexity Low_complexity 1 34 0 7 722 238 385 66 51 chrX 17986031 17986228 -148664068 - MamRep137 DNA TcMar? -49 395 196 7 722 191 36 36 0 chrX 17986259 17986287 -148664009 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 7 722 333 297 95 63 chrX 17986293 17986451 -148663845 + RSINE1 SINE B4 3 165 0 7 722 440 125 42 0 chrX 17986455 17986551 -148663745 + (CA)n Simple_repeat Simple_repeat 1 100 0 7 722 350 282 49 39 chrX 17986569 17986772 -148663524 - L1MD3 LINE L1 0 7995 7791 7 722 970 249 43 27 chrX 17986779 17987078 -148663218 + MER90a LTR ERV1 2 270 -344 7 722 7218 41 3 2 chrX 17987084 17987975 -148662321 - L1Md_F2 LINE L1 0 6582 5690 7 722 3485 220 44 122 chrX 17988241 17989276 -148661020 + RMER17B LTR ERVK 4 958 0 7 722 581 216 6 57 chrX 17989278 17989435 -148660861 + RMER17A-int LTR ERVK 3 151 -1577 7 722 372 18 35 17 chrX 17989435 17989493 -148660803 + (TCC)n Simple_repeat Simple_repeat 2 60 0 7 722 343 200 0 32 chrX 17990105 17990167 -148660129 - RMER17B LTR ERVK -894 64 5 7 722 207 0 0 0 chrX 17990806 17990829 -148659467 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 7 722 2919 142 83 40 chrX 17990919 17991425 -148658871 + RLTR11A LTR ERVK 1 528 0 7 722 238 299 44 44 chrX 17991936 17992027 -148658269 + MER45A DNA Tip100 80 170 -8 7 722 253 296 45 0 chrX 17992592 17992603 -148657693 - ID_B1 SINE B4 -131 93 2 7 722 307 273 26 0 chrX 17992603 17992680 -148657616 - ID2 SINE ID -3 80 2 7 722 262 316 75 56 chrX 17992854 17993116 -148657180 - MLT1D LTR MaLR -103 402 95 7 722 416 362 91 41 chrX 17993200 17993563 -148656733 - LTR16A LTR ERVL -70 381 1 7 722 320 345 77 6 chrX 17994844 17995013 -148655283 - MER115 DNA Tip100 -19 674 494 7 722 365 382 23 8 chrX 17995087 17995219 -148655077 + LTR16B2 LTR ERVL 69 202 -260 7 722 366 23 0 0 chrX 17998210 17998253 -148652043 + (TAA)n Simple_repeat Simple_repeat 2 44 0 7 722 225 259 74 0 chrX 17998271 17998325 -148651971 + PB1 SINE Alu 17 74 -53 7 722 591 269 97 8 chrX 17998657 17998904 -148651392 - Lx9 LINE L1 -30 7614 7346 7 722 272 301 14 0 chrX 17999079 17999152 -148651144 + ID SINE ID 11 84 -140 7 722 228 343 71 0 chrX 17999660 17999759 -148650537 + MIRb SINE MIR 146 251 -17 7 722 416 229 0 9 chrX 17999889 17999999 -148650297 + CT-rich Low_complexity Low_complexity 4 112 0 7 722 198 180 16 32 chrX 18000000 18000063 -148650233 + CT-rich Low_complexity Low_complexity 2 63 0 1 722 595 211 0 95 chrX 18001081 18001207 -148649089 - MTEa LTR MaLR -103 276 163 2 722 627 137 8 16 chrX 18001207 18001333 -148648963 + CT-rich Low_complexity Low_complexity 2 126 0 3 722 745 263 23 0 chrX 18001338 18001509 -148648787 - MTEa LTR MaLR -196 183 9 2 722 331 269 75 19 chrX 18001607 18001713 -148648583 + PB1D7 SINE Alu 1 112 -8 4 722 216 245 0 0 chrX 18001713 18001762 -148648534 + (CCA)n Simple_repeat Simple_repeat 3 51 0 5 722 486 0 0 0 chrX 18001768 18001822 -148648474 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 722 186 43 0 0 chrX 18002060 18002083 -148648213 + (TTTC)n Simple_repeat Simple_repeat 1 23 0 7 722 352 311 2 5 chrX 18002430 18002588 -148647708 + MURVY-int LTR ERV1 2757 3025 -4531 8 722 22686 145 62 28 chrX 18002802 18004958 -148645338 + Lx LINE L1 543 2794 -3089 9 722 414 39 0 0 chrX 18004958 18005010 -148645286 + (CCA)n Simple_repeat Simple_repeat 1 52 0 1 722 22686 167 9 38 chrX 18005010 18007050 -148643246 + Lx LINE L1 2795 4733 -1150 9 722 279 0 0 0 chrX 18007050 18007081 -148643215 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 722 22686 141 21 26 chrX 18007081 18008998 -148641298 + Lx LINE L1 4734 6654 0 9 722 458 266 78 78 chrX 18009007 18009249 -148641047 + MuRRS4-int LTR ERV1 2932 3117 -1946 1 722 891 270 189 2 chrX 18009631 18010044 -148640252 + MuRRS4-int LTR ERV1 3536 4025 -1038 1 722 398 320 56 8 chrX 18010907 18011175 -148639121 + RLTR6-int LTR ERV1 7447 7727 -51 1 722 2218 59 210 0 chrX 18011259 18011630 -148638666 + RLTR47_MM LTR ERV1 1 449 -83 1 722 330 324 81 30 chrX 18011768 18012359 -148637937 + L1ME3 LINE L1 5371 5994 -170 1 722 376 283 69 0 chrX 18012490 18012635 -148637661 + L1ME3 LINE L1 6006 6160 -2 1 722 477 279 9 26 chrX 18012655 18012769 -148637527 + PB1D10 SINE Alu 2 113 -4 1 722 911 115 6 0 chrX 18012771 18012928 -148637368 + (CCAA)n Simple_repeat Simple_repeat 2 159 0 1 722 23 0 0 0 chrX 18013446 18013469 -148636827 + AT_rich Low_complexity Low_complexity 1 23 0 1 722 213 358 44 15 chrX 18013617 18013753 -148636543 + L3 LINE CR1 3523 3662 -827 1 722 1111 72 0 0 chrX 18013794 18013932 -148636364 + B1_Mus2 SINE Alu 3 140 -7 2 722 450 94 0 0 chrX 18013937 18014001 -148636295 + (GGA)n Simple_repeat Simple_repeat 2 65 0 2 722 460 296 157 2 chrX 18014001 18014148 -148636148 + B3 SINE B2 28 197 -1 2 722 320 264 0 11 chrX 18014606 18014694 -148635602 + MTE2b LTR MaLR 238 324 -55 2 722 487 301 26 7 chrX 18014721 18014875 -148635421 - RSINE1 SINE B4 -5 160 4 2 722 22 0 0 0 chrX 18015281 18015303 -148634993 + AT_rich Low_complexity Low_complexity 1 22 0 2 722 312 309 26 79 chrX 18015576 18015766 -148634530 - Tigger7 DNA MER2_type -12 2479 2300 2 722 769 303 51 47 chrX 18015774 18015992 -148634304 + B4A SINE B4 6 226 -66 2 722 2085 144 72 16 chrX 18015992 18016365 -148633931 - ORR1B1 LTR MaLR 0 394 1 2 722 769 303 51 47 chrX 18016365 18016399 -148633897 + B4A SINE B4 227 259 -33 2 722 24 0 0 0 chrX 18016399 18016423 -148633873 + AT_rich Low_complexity Low_complexity 1 24 0 2 722 895 60 7 19 chrX 18016490 18016644 -148633652 - RMER17B LTR ERVK -495 463 312 3 722 315 282 35 23 chrX 18016646 18016733 -148633563 - Tigger7 DNA MER2_type -2402 89 2 2 722 1274 177 111 102 chrX 18017194 18017397 -148632899 - ORR1D1 LTR MaLR 0 374 154 3 722 496 81 0 22 chrX 18017397 18017486 -148632810 + (TAGA)n Simple_repeat Simple_repeat 2 88 0 3 722 1274 177 111 102 chrX 18017486 18017653 -148632643 - ORR1D1 LTR MaLR -221 153 2 3 722 267 284 161 0 chrX 18018063 18018144 -148632152 - PB1D10 SINE Alu -21 96 3 3 722 21 0 0 0 chrX 18018216 18018237 -148632059 + AT_rich Low_complexity Low_complexity 1 21 0 3 722 3431 121 54 6 chrX 18018525 18019041 -148631255 + Lx4A LINE L1 6508 7048 -10 3 722 260 37 74 0 chrX 18019101 18019155 -148631141 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 3 722 207 0 0 0 chrX 18019604 18019627 -148630669 + (A)n Simple_repeat Simple_repeat 1 23 0 3 722 227 259 0 0 chrX 18019981 18020035 -148630261 + CT-rich Low_complexity Low_complexity 13 66 0 3 722 477 50 0 0 chrX 18020122 18020182 -148630114 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 722 363 265 106 37 chrX 18020630 18020791 -148629505 - MER2 DNA MER2_type -60 285 114 4 722 392 333 0 18 chrX 18020828 18020938 -148629358 - PB1 SINE Alu -7 120 13 4 722 182 261 57 14 chrX 18021849 18021919 -148628377 - MIR3 SINE MIR 0 208 136 4 722 243 320 103 8 chrX 18022039 18022165 -148628131 + L2c LINE L2 3250 3387 0 4 722 2126 111 16 3 chrX 18022273 18022590 -148627706 - ORR1A4 LTR MaLR -8 321 1 4 722 581 274 142 28 chrX 18022692 18022784 -148627512 - CYRA11_Mm Unknown Y-chromosome -159 458 237 4 722 1002 152 6 0 chrX 18022784 18022942 -148627354 + URR1A DNA MER1_type 67 225 -1 4 722 581 274 142 28 chrX 18022942 18022981 -148627315 - CYRA11_Mm Unknown Y-chromosome -159 236 137 4 722 2129 189 117 18 chrX 18023217 18023670 -148626626 + RLTR18B LTR ERVK 11 508 -4 4 722 441 0 0 0 chrX 18023948 18023997 -148626299 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 722 459 268 0 20 chrX 18024003 18024102 -148626194 - B1F1 SINE Alu -51 98 2 4 722 321 360 19 39 chrX 18024102 18024159 -148626137 - B4 SINE B4 -105 187 35 5 722 890 143 142 44 chrX 18024429 18024634 -148625662 - URR1B DNA MER1_type 0 225 1 5 722 214 278 44 28 chrX 18025242 18025353 -148624943 - MIR SINE MIR -54 154 41 5 722 316 338 0 0 chrX 18026056 18026148 -148624148 - ID4 SINE ID -59 93 2 5 722 270 320 25 25 chrX 18026667 18026747 -148623549 - ID4 SINE ID 0 83 4 5 722 339 358 36 14 chrX 18026747 18026886 -148623410 - MIR SINE MIR -73 189 48 5 722 229 51 51 0 chrX 18027526 18027565 -148622731 + (CAA)n Simple_repeat Simple_repeat 2 42 0 5 722 265 348 112 65 chrX 18027993 18028377 -148621919 + L2c LINE L2 2986 3387 0 5 722 1117 246 45 161 chrX 18028647 18029068 -148621228 + MTEa LTR MaLR 1 372 -7 5 722 27 0 0 0 chrX 18029711 18029738 -148620558 + AT_rich Low_complexity Low_complexity 1 27 0 5 722 837 184 0 13 chrX 18029803 18029952 -148620344 - B1_Mus1 SINE Alu 0 148 2 6 722 308 397 68 0 chrX 18030417 18030563 -148619733 + HAL1-3A_ME LINE L1 2284 2439 -419 6 722 9605 128 30 95 chrX 18030632 18030712 -148619584 + Lx2B LINE L1 4003 4103 -1774 6 722 3250 58 0 2 chrX 18030712 18031109 -148619187 - MTA_Mm LTR MaLR 0 396 1 6 722 9605 155 31 66 chrX 18031109 18032428 -148617868 + Lx2B LINE L1 4104 5374 -1626 6 722 555 224 19 0 chrX 18032428 18032535 -148617761 + B3 SINE B2 21 129 -87 6 722 9605 155 31 66 chrX 18032535 18034058 -148616238 + Lx2B LINE L1 5375 6843 -157 6 722 405 0 0 0 chrX 18034058 18034103 -148616193 + (GAAA)n Simple_repeat Simple_repeat 2 46 0 6 722 277 325 25 41 chrX 18034249 18034493 -148615803 - L1M5 LINE L1 -248 5876 5637 6 722 1785 144 195 7 chrX 18034513 18034945 -148615351 + Lx4B LINE L1 6237 6750 -308 6 722 577 218 62 11 chrX 18034947 18035099 -148615197 - B4 SINE B4 -63 229 63 6 722 351 339 27 0 chrX 18035066 18035178 -148615118 - B4A SINE B4 -117 175 61 6 722 273 269 143 71 chrX 18035109 18035221 -148615075 - B3A SINE B2 -77 121 2 7 722 292 247 21 73 chrX 18035985 18036081 -148614215 + BC1_Mm scRNA scRNA 2 92 -60 7 722 920 235 51 0 chrX 18036159 18036355 -148613941 + B3 SINE B2 6 211 -5 7 722 234 0 0 0 chrX 18036393 18036419 -148613877 + (TC)n Simple_repeat Simple_repeat 1 26 0 7 722 312 206 165 53 chrX 18036433 18036566 -148613730 + L1MA4 LINE L1 5783 5930 -370 7 722 300 242 113 0 chrX 18036563 18036687 -148613609 + L1MA4 LINE L1 5795 5932 -368 7 722 330 26 0 0 chrX 18036696 18036735 -148613561 + (TA)n Simple_repeat Simple_repeat 2 40 0 7 722 28 29 0 0 chrX 18036904 18036939 -148613357 + AT_rich Low_complexity Low_complexity 1 35 0 7 722 675 0 0 0 chrX 18037573 18037648 -148612648 + (TTTC)n Simple_repeat Simple_repeat 4 78 0 7 722 203 267 213 65 chrX 18037712 18037820 -148612476 + MIR SINE MIR 21 144 -118 7 722 270 0 0 0 chrX 18038857 18038887 -148611409 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 722 210 173 28 28 chrX 18038967 18039074 -148611222 + (CA)n Simple_repeat Simple_repeat 2 108 0 8 722 202 268 24 31 chrX 18039140 18039267 -148611029 + (CA)n Simple_repeat Simple_repeat 2 127 0 8 722 187 157 0 38 chrX 18039293 18039346 -148610950 + (CATA)n Simple_repeat Simple_repeat 4 54 0 8 722 183 42 0 0 chrX 18039423 18039447 -148610849 + (TC)n Simple_repeat Simple_repeat 1 24 0 8 722 311 301 18 6 chrX 18039447 18039606 -148610690 + (CA)n Simple_repeat Simple_repeat 1 161 0 8 722 495 0 0 0 chrX 18039606 18039661 -148610635 + (CCA)n Simple_repeat Simple_repeat 2 56 0 8 722 282 253 9 142 chrX 18040375 18040481 -148609815 - B1F2 SINE Alu -57 92 1 8 722 373 281 35 121 chrX 18040481 18040561 -148609735 - B4 SINE B4 -220 72 8 8 722 481 331 73 53 chrX 18040629 18040970 -148609326 + ORR1E LTR MaLR 1 348 -11 8 722 239 212 45 0 chrX 18041039 18041105 -148609191 + CT-rich Low_complexity Low_complexity 1 69 0 8 722 297 222 0 0 chrX 18041105 18041167 -148609129 - B1F SINE Alu -7 142 49 9 722 467 72 0 0 chrX 18041174 18041243 -148609053 + L1_Mus1 LINE L1 6498 6566 -1 9 722 25 31 0 0 chrX 18041243 18041275 -148609021 + AT_rich Low_complexity Low_complexity 1 32 0 9 722 461 277 0 0 chrX 18041670 18041771 -148608525 + Lx8 LINE L1 6191 6291 -1182 9 722 236 202 171 37 chrX 18041771 18041853 -148608443 + RLTR13D3 LTR ERVK 1 93 -1021 9 722 239 158 0 0 chrX 18042260 18042298 -148607998 + B2_Mm2 SINE B2 1 38 -157 9 722 439 226 47 31 chrX 18042547 18042675 -148607621 + RLTR13D3 LTR ERVK 942 1071 -43 9 722 1528 272 91 15 chrX 18042705 18043224 -148607072 + Lx8 LINE L1 6287 6844 -629 9 722 237 139 0 0 chrX 18043328 18043364 -148606932 - Lx4A LINE L1 -227 6831 6796 9 722 316 159 0 100 chrX 18043354 18043424 -148606872 - L1_Mur2 LINE L1 -3463 2414 2352 9 722 306 0 0 0 chrX 18043424 18043458 -148606838 + (TTTTG)n Simple_repeat Simple_repeat 4 37 0 9 722 1139 182 18 9 chrX 18043470 18043692 -148606604 + Lx4B LINE L1 6834 7057 -1 9 722 471 327 78 27 chrX 18043824 18044556 -148605740 + Lx7 LINE L1 1896 2678 -3904 1 722 416 243 45 36 chrX 18044626 18044737 -148605559 - ORR1D2 LTR MaLR -2 368 257 1 722 1765 129 18 88 chrX 18044741 18045081 -148605215 - ORR1A4 LTR MaLR -8 321 6 1 722 564 245 113 180 chrX 18045077 18045361 -148604935 - ORR1D2 LTR MaLR -103 267 3 1 722 235 271 17 0 chrX 18045520 18045579 -148604717 + B4A SINE B4 2 61 -231 1 722 3008 53 42 0 chrX 18045579 18045957 -148604339 + L1_Mus1 LINE L1 6174 6567 0 1 722 792 267 109 34 chrX 18046024 18046490 -148603806 + Lx7 LINE L1 5478 5978 -867 1 722 645 114 0 0 chrX 18046497 18046611 -148603685 + (TC)n Simple_repeat Simple_repeat 1 114 0 1 722 1094 207 21 17 chrX 18046642 18046964 -148603332 + Lx7 LINE L1 5988 6359 -634 1 722 307 213 0 16 chrX 18046998 18047060 -148603236 + RMER15 LTR ERVL 4 64 -511 1 722 578 212 14 50 chrX 18047078 18047217 -148603079 + RMER15 LTR ERVL 28 161 -414 1 722 323 280 207 0 chrX 18047205 18047355 -148602941 - RMER15 LTR ERVL -225 350 170 1 722 1237 198 21 8 chrX 18047343 18047582 -148602714 + RMER15 LTR ERVL 334 575 0 1 722 575 279 50 17 chrX 18047583 18047824 -148602472 + Lx7 LINE L1 6363 6611 -1787 1 722 7484 102 24 21 chrX 18048287 18048636 -148601660 - Lx4A LINE L1 0 7058 6718 1 722 7090 52 23 0 chrX 18048636 18049509 -148600787 + RLTR13B1 LTR ERVK 1 893 0 1 722 7484 102 24 21 chrX 18049509 18050273 -148600023 - Lx4A LINE L1 -341 6717 5941 1 722 5613 76 32 11 chrX 18050932 18051714 -148598582 - L1_Mus3 LINE L1 -3 6635 5838 1 722 6262 98 1 0 chrX 18051714 18052624 -148597672 + L1_Mus3 LINE L1 4917 5827 -56 1 722 324 0 0 0 chrX 18052918 18052954 -148597342 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 722 192 40 0 0 chrX 18052954 18052979 -148597317 + (CAG)n Simple_repeat Simple_repeat 3 27 0 1 722 180 0 0 0 chrX 18052979 18052999 -148597297 + (CCA)n Simple_repeat Simple_repeat 1 20 0 1 722 21 57 0 0 chrX 18053049 18053084 -148597212 + AT_rich Low_complexity Low_complexity 1 35 0 1 722 585 76 0 0 chrX 18053149 18053228 -148597068 + (TTCC)n Simple_repeat Simple_repeat 1 79 0 1 722 225 132 0 0 chrX 18053303 18053341 -148596955 + (CAT)n Simple_repeat Simple_repeat 2 39 0 1 722 1858 277 30 22 chrX 18053341 18053923 -148596373 - Lx5 LINE L1 -17 7033 6455 1 722 2045 150 0 47 chrX 18053923 18054265 -148596031 - ORR1A3 LTR MaLR 0 326 1 1 722 1281 262 52 14 chrX 18054265 18054641 -148595655 - Lx5 LINE L1 -696 6764 6153 1 722 1279 120 11 7 chrX 18054641 18054854 -148595442 - RMER6D LTR ERVK -463 227 9 1 722 273 89 0 0 chrX 18055196 18055241 -148595055 - L1M4b LINE L1 -5807 1527 1483 1 722 429 303 25 29 chrX 18055207 18055445 -148594851 - Lx5 LINE L1 -6591 1137 901 1 722 531 233 10 0 chrX 18055667 18055770 -148594526 + RSINE1 SINE B4 24 127 -38 1 722 309 377 18 89 chrX 18055842 18056011 -148594285 + LTR16B1 LTR ERVL 55 211 -269 1 722 378 281 39 10 chrX 18056281 18056385 -148593911 - PB1D10 SINE Alu -9 108 2 1 722 562 347 59 43 chrX 18057228 18057484 -148592812 - LTR16C LTR ERVL -128 361 102 1 722 1096 255 65 68 chrX 18057695 18058032 -148592264 + ORR1E LTR MaLR 18 353 -6 1 722 244 187 40 13 chrX 18058032 18058108 -148592188 + L1M4 LINE L1 5085 5162 -984 1 722 430 189 38 60 chrX 18058090 18058224 -148592072 + L1M4 LINE L1 5345 5475 -703 1 722 23 33 0 0 chrX 18058280 18058310 -148591986 + AT_rich Low_complexity Low_complexity 1 30 0 1 722 10311 99 7 0 chrX 18058315 18060158 -148590138 + L1_Mus1 LINE L1 4300 6155 -412 1 722 326 215 31 80 chrX 18060159 18060321 -148589975 + RMER17B LTR ERVK 303 456 -502 1 722 3290 73 0 0 chrX 18060328 18060751 -148589545 + L1_Mus1 LINE L1 6144 6566 -1 1 722 22 0 0 0 chrX 18060751 18060773 -148589523 + AT_rich Low_complexity Low_complexity 1 22 0 1 722 511 71 0 0 chrX 18060773 18060843 -148589453 + B1_Mus2 SINE Alu 78 147 0 1 722 284 133 29 39 chrX 18060843 18060945 -148589351 + A-rich Low_complexity Low_complexity 3 103 0 1 722 1991 182 48 7 chrX 18060952 18061070 -148589226 + ETnERV2-int LTR ERVK 5361 5478 -1928 1 722 555 16 0 0 chrX 18061070 18061134 -148589162 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 722 1991 182 48 7 chrX 18061134 18061431 -148588865 + ETnERV2-int LTR ERVK 5479 5792 -1614 1 722 1007 151 52 0 chrX 18061480 18061652 -148588644 + RMER16-int LTR ERVK 3793 3973 -1433 1 722 2040 193 24 17 chrX 18061912 18062324 -148587972 + ETnERV2-int LTR ERVK 6644 7058 -348 1 722 459 241 0 49 chrX 18062553 18062675 -148587621 + RLTR43A LTR ERVK 249 364 0 1 722 1355 225 41 6 chrX 18062675 18062993 -148587303 + Lx6 LINE L1 7057 7385 -75 1 722 941 186 69 14 chrX 18063006 18063224 -148587072 - Lx7 LINE L1 -417 7279 7037 1 722 1060 234 39 39 chrX 18063370 18063784 -148586512 - BGLII_B LTR ERVK -6 439 66 1 722 2567 178 79 19 chrX 18063847 18064565 -148585731 - MYSERV16_I-int LTR ERVK -6 2320 1560 1 722 1010 282 55 92 chrX 18064635 18065111 -148585185 + RLTR31_Mur LTR ERVK 96 553 0 1 722 2743 151 71 6 chrX 18065111 18065132 -148585164 - Lx7 LINE L1 -627 7069 7042 1 722 1033 201 23 9 chrX 18065132 18065353 -148584943 - URR1B DNA MER1_type -1 224 1 1 722 2743 151 71 6 chrX 18065353 18065836 -148584460 - Lx7 LINE L1 -655 7041 6532 1 722 915 183 21 33 chrX 18065840 18066083 -148584213 + Lx7 LINE L1 7451 7690 -6 1 722 22 0 0 0 chrX 18066412 18066434 -148583862 + AT_rich Low_complexity Low_complexity 1 22 0 1 722 7835 93 90 30 chrX 18066434 18067344 -148582952 - Lx3_Mus LINE L1 -8 7001 6095 1 722 733 56 19 0 chrX 18067344 18067451 -148582845 + (TCCC)n Simple_repeat Simple_repeat 4 112 0 1 722 10410 80 39 16 chrX 18067451 18069150 -148581146 - Lx3_Mus LINE L1 -915 6094 4291 1 722 2433 86 0 0 chrX 18069147 18069506 -148580790 + Lx3_Mus LINE L1 3923 4281 -1605 1 722 1818 204 48 14 chrX 18069560 18069993 -148580303 - Lx5 LINE L1 -21 7029 6582 1 722 297 100 0 0 chrX 18070021 18070071 -148580225 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 1 722 1050 98 11 17 chrX 18070142 18070318 -148579978 + (TCTCC)n Simple_repeat Simple_repeat 5 179 0 1 722 541 231 132 0 chrX 18070321 18070442 -148579854 - B1_Mur2 SINE Alu 0 149 13 1 722 5114 212 97 35 chrX 18071027 18071151 -148579145 - Lx9 LINE L1 0 7644 7481 1 722 552 15 0 0 chrX 18071151 18071216 -148579080 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 722 5114 212 97 35 chrX 18071216 18072553 -148577743 - Lx9 LINE L1 -164 7480 6093 1 722 676 205 28 28 chrX 18072600 18072776 -148577520 - L1_Rod LINE L1 -1512 4335 4160 1 722 1128 207 4 54 chrX 18073056 18073316 -148576980 + RMER19B LTR ERVK 656 902 0 1 722 618 233 98 60 chrX 18073316 18073664 -148576632 - L1_Rod LINE L1 -2281 3596 3259 1 722 234 177 63 16 chrX 18073686 18073749 -148576547 - Lx7 LINE L1 0 7696 7631 1 722 603 106 0 0 chrX 18073822 18073916 -148576380 - L1_Mus2 LINE L1 0 6566 6473 1 722 21463 138 20 13 chrX 18073916 18078596 -148571700 - MusHAL1 LINE L1 -569 5314 605 1 722 240 260 0 0 chrX 18078785 18078835 -148571461 - L1VL4 LINE L1 -6063 239 190 1 722 285 282 72 72 chrX 18078837 18079032 -148571264 - B2_Mm2 SINE B2 0 195 1 1 722 425 288 70 9 chrX 18079367 18079581 -148570715 - L1MA6 LINE L1 -201 6099 5873 1 722 234 254 99 90 chrX 18079651 18079863 -148570433 + RLTR15 LTR ERVK 43 256 -103 1 722 741 229 95 11 chrX 18079927 18080117 -148570179 - MER68 LTR ERVL -306 257 52 1 722 1720 180 22 83 chrX 18080785 18081148 -148569148 - ORR1B1 LTR MaLR -13 381 41 1 722 309 258 10 82 chrX 18081180 18081277 -148569019 + RMER15 LTR ERVL 337 426 -149 1 722 231 336 56 56 chrX 18081435 18081561 -148568735 - MLT1H2 LTR MaLR -299 190 65 1 722 2162 149 38 5 chrX 18081561 18081933 -148568363 + Lx4A LINE L1 6219 6602 -456 1 722 5026 52 2 0 chrX 18081934 18082554 -148567742 - L1Md_F2 LINE L1 -12 6570 5950 1 90 33823 47 0 3 chrX 18082554 18088036 -148562260 + L1Md_T LINE L1 30 5589 -297 1 723 8496 33 0 0 chrX 18088036 18089032 -148561264 + L1Md_T LINE L1 5590 6585 0 1 723 33364 71 1 3 chrX 18089047 18094708 -148555588 - L1Md_F2 LINE L1 -624 5958 308 1 723 2417 111 6 3 chrX 18094708 18095061 -148555235 + Lx4A LINE L1 6593 6946 -112 1 723 24 32 0 0 chrX 18095069 18095100 -148555196 + AT_rich Low_complexity Low_complexity 1 31 0 1 723 207 0 0 0 chrX 18095323 18095346 -148554950 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1 723 656 207 74 0 chrX 18095366 18095487 -148554809 - B3 SINE B2 -86 130 1 1 723 521 241 60 0 chrX 18095522 18095638 -148554658 - B1_Mm SINE Alu -21 126 4 1 723 3392 154 57 67 chrX 18095741 18096463 -148553833 - RLTR13D3 LTR ERVK 0 1114 401 1 723 511 333 51 0 chrX 18096567 18096705 -148553591 - RSINE1 SINE B4 -20 145 1 1 723 271 329 10 7 chrX 18096768 18096861 -148553435 - PB1D10 SINE Alu -28 121 28 1 723 666 231 87 46 chrX 18096908 18097103 -148553193 - B3 SINE B2 -12 204 2 1 723 246 136 0 0 chrX 18097745 18097789 -148552507 + (TCC)n Simple_repeat Simple_repeat 2 45 0 1 723 218 269 71 43 chrX 18098634 18098704 -148551592 - L3b LINE CR1 -246 236 165 1 723 3571 40 2 18 chrX 18099404 18099858 -148550438 - L1Md_F2 LINE L1 0 6582 6136 1 723 1449 223 53 28 chrX 18099900 18100260 -148550036 - ORR1D2 LTR MaLR -1 369 1 1 723 374 322 133 64 chrX 18100316 18100384 -148549912 + MTE2b LTR MaLR 32 97 -322 1 723 1594 197 100 26 chrX 18100384 18100774 -148549522 - MTD LTR MaLR 0 419 1 1 723 1021 278 82 41 chrX 18100774 18101006 -148549290 + MTE2b LTR MaLR 66 318 -61 1 723 1029 62 7 0 chrX 18101006 18101151 -148549145 - L1Md_A LINE L1 0 6582 6437 1 723 1021 278 82 41 chrX 18101151 18101213 -148549083 + MTE2b LTR MaLR 319 379 0 1 723 605 100 0 20 chrX 18101453 18101539 -148548757 + (TTCC)n Simple_repeat Simple_repeat 1 86 0 1 723 1124 90 7 0 chrX 18101539 18101684 -148548612 - B1_Mus2 SINE Alu -1 146 1 1 723 605 100 0 20 chrX 18101684 18101699 -148548597 + (TTCC)n Simple_repeat Simple_repeat 4 16 0 1 723 411 277 81 54 chrX 18101712 18101861 -148548435 - MER63B DNA AcHobo 0 436 284 1 723 3612 157 57 26 chrX 18101965 18102627 -148547669 + RLTR17 LTR ERVK 1 683 -9 1 723 7675 51 0 11 chrX 18102627 18104306 -148545990 - L1Md_F2 LINE L1 -16 6566 4906 1 723 1640 199 48 28 chrX 18104346 18105014 -148545282 - ORR1D2-int LTR MaLR -858 1105 348 1 723 24 53 0 0 chrX 18105227 18105265 -148545031 + AT_rich Low_complexity Low_complexity 1 38 0 1 723 1178 62 0 0 chrX 18105353 18105499 -148544797 - B1_Mm SINE Alu 0 147 2 1 723 320 250 24 12 chrX 18105563 18105648 -148544648 + Lx9 LINE L1 7085 7170 -474 1 723 319 293 39 32 chrX 18105706 18105861 -148544435 + Lx9 LINE L1 7283 7438 -206 1 723 23 78 0 0 chrX 18105892 18105943 -148544353 + AT_rich Low_complexity Low_complexity 1 51 0 1 723 420 59 11 56 chrX 18105965 18106055 -148544241 + (TA)n Simple_repeat Simple_repeat 1 86 0 1 723 238 361 14 0 chrX 18106064 18106136 -148544160 + RSINE1 SINE B4 78 150 -15 1 723 247 290 0 0 chrX 18106655 18106717 -148543579 + MLT1F1 LTR MaLR 1 62 -507 1 723 1770 136 58 35 chrX 18106704 18107048 -148543248 + RMER6A LTR ERVK 405 756 0 1 723 6276 89 1 11 chrX 18107224 18107445 -148542851 - L1Md_F2 LINE L1 -12 6570 6352 1 723 441 0 0 0 chrX 18107445 18107494 -148542802 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 723 6276 89 1 11 chrX 18107494 18108174 -148542122 - L1Md_F2 LINE L1 -231 6351 5678 1 723 269 314 0 0 chrX 18108175 18108245 -148542051 + Arthur1 DNA Tip100 234 303 -3644 2 723 523 268 141 19 chrX 18108290 18108503 -148541793 + LTR37A LTR ERV1 3 241 -185 2 723 262 198 77 0 chrX 18108507 18108598 -148541698 + T-rich Low_complexity Low_complexity 5 102 0 2 723 231 302 59 64 chrX 18108598 18108800 -148541496 + LTR37A LTR ERV1 225 425 -1 2 723 279 327 45 18 chrX 18109437 18109549 -148540747 + PB1D10 SINE Alu 1 115 -2 2 723 441 335 18 111 chrX 18109549 18109720 -148540576 - B3 SINE B2 -3 192 38 2 723 1095 231 109 34 chrX 18109864 18110213 -148540083 + MTEa LTR MaLR 5 379 0 2 723 4107 299 88 26 chrX 18110213 18110960 -148539336 + MTEa-int LTR MaLR 1 796 -784 2 723 1196 179 119 114 chrX 18110960 18111218 -148539078 - ORR1C2 LTR MaLR 0 384 153 2 723 240 35 0 0 chrX 18111218 18111247 -148539049 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 723 1196 179 119 114 chrX 18111247 18111366 -148538930 - ORR1C2 LTR MaLR -232 152 5 2 723 4107 299 88 26 chrX 18111366 18111646 -148538650 + MTEa-int LTR MaLR 797 1084 -496 2 723 300 70 0 0 chrX 18111646 18111689 -148538607 + (CATA)n Simple_repeat Simple_repeat 2 44 0 2 723 2836 290 83 32 chrX 18111689 18112135 -148538161 + MTEa-int LTR MaLR 1085 1566 -14 2 723 1165 282 27 21 chrX 18112145 18112518 -148537778 + MTEa LTR MaLR 5 379 0 2 723 10246 105 12 18 chrX 18113211 18115566 -148534730 + L1VL4 LINE L1 190 2537 -1022 2 723 33957 34 1 0 chrX 18115564 18121813 -148528483 + L1Md_T LINE L1 1 5589 -297 2 723 9043 5 0 0 chrX 18121813 18122809 -148527487 + L1Md_T LINE L1 5590 6585 0 2 723 2395 104 2 26 chrX 18122811 18122905 -148527391 + L1VL4 LINE L1 2514 2603 -956 2 723 1127 96 0 0 chrX 18122905 18123051 -148527245 + B1_Mus1 SINE Alu 3 148 0 2 723 1197 58 0 0 chrX 18123052 18123206 -148527090 + (GAAA)n Simple_repeat Simple_repeat 4 157 0 2 723 2395 104 2 26 chrX 18123206 18123525 -148526771 + L1VL4 LINE L1 2604 2919 -640 2 723 7170 78 16 2 chrX 18123524 18125020 -148525276 + L1_Mus1 LINE L1 5050 6566 -1 2 723 3377 162 15 13 chrX 18125013 18125700 -148524596 + L1_Mur2 LINE L1 3830 4517 -1360 2 723 2156 144 19 3 chrX 18125697 18126058 -148524238 + Lx2 LINE L1 6277 6643 -354 2 723 1348 152 0 0 chrX 18126058 18126281 -148524015 + Lx2 LINE L1 6775 6997 0 2 723 301 344 47 31 chrX 18126816 18126945 -148523351 + ORR1E LTR MaLR 3 133 -226 2 723 2938 177 43 37 chrX 18126966 18127730 -148522566 + L1_Rod LINE L1 4690 5458 -389 2 723 324 161 0 0 chrX 18127761 18127823 -148522473 + CT-rich Low_complexity Low_complexity 2 63 0 2 723 333 0 0 0 chrX 18127823 18127860 -148522436 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 723 1531 318 110 2 chrX 18127925 18128442 -148521854 - MTE-int LTR MaLR -67 1513 941 2 723 800 258 106 64 chrX 18128448 18128713 -148521583 - MTE2b LTR MaLR -103 276 1 2 723 2311 214 42 94 chrX 18128777 18128944 -148521352 + RMER2 LTR ERV1 1 148 -419 2 723 2732 47 44 5 chrX 18128944 18129311 -148520985 - L1Md_F3 LINE L1 0 6584 6204 2 723 2311 214 42 94 chrX 18129311 18129741 -148520555 + RMER2 LTR ERV1 149 567 0 2 723 384 314 27 14 chrX 18129899 18130027 -148520269 - PB1D10 SINE Alu -5 145 14 2 723 2641 185 93 2 chrX 18130168 18130716 -148519580 - RMER1B Other Other -17 1049 452 2 723 769 371 68 30 chrX 18130719 18131216 -148519080 - MTE-int LTR MaLR -967 613 98 2 723 278 345 81 40 chrX 18131661 18131809 -148518487 - LTR48 LTR ERV1 -619 168 15 2 723 36859 34 1 0 chrX 18132135 18137623 -148512673 - L1Md_T LINE L1 0 6582 1108 2 723 4937 88 62 0 chrX 18137591 18138328 -148511968 - L1Md_T LINE L1 -5411 1205 423 2 723 424 285 8 61 chrX 18138463 18138593 -148511703 + MER31A LTR ERV1 7 129 -337 2 723 310 306 22 104 chrX 18138593 18138728 -148511568 - ORR1E LTR MaLR 0 379 256 2 723 604 287 90 63 chrX 18138731 18138999 -148511297 + B4 SINE B4 2 276 -16 2 723 790 259 95 80 chrX 18139124 18139530 -148510766 + MTE2a LTR MaLR 1 419 0 2 723 404 335 62 38 chrX 18139544 18139755 -148510541 - ORR1E LTR MaLR -143 216 1 2 723 565 309 47 24 chrX 18139755 18139965 -148510331 + MER31A LTR ERV1 114 328 -157 2 723 837 185 33 33 chrX 18139998 18140182 -148510114 - B2_Mm2 SINE B2 -10 185 2 2 723 22 35 0 0 chrX 18140373 18140402 -148509894 + AT_rich Low_complexity Low_complexity 1 29 0 2 723 234 278 105 53 chrX 18140424 18140500 -148509796 - ID4 SINE ID -2 81 2 2 723 372 308 11 21 chrX 18140518 18140622 -148509674 - PB1D7 SINE Alu -6 114 12 2 723 938 252 26 52 chrX 18140628 18140672 -148509624 - MT2B LTR ERVL -10 591 544 2 723 342 0 0 0 chrX 18140672 18140710 -148509586 + (TC)n Simple_repeat Simple_repeat 1 38 0 2 723 261 0 0 0 chrX 18140710 18140738 -148509558 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 723 938 239 88 83 chrX 18140738 18141149 -148509147 - MT2B LTR ERVL -58 543 1 2 723 332 131 180 0 chrX 18141290 18141351 -148508945 + RCHARR1 DNA MER1_type 549 620 -354 2 723 504 0 0 0 chrX 18141628 18141684 -148508612 + (GA)n Simple_repeat Simple_repeat 2 57 0 2 723 719 171 273 0 chrX 18141741 18141957 -148508339 + RCHARR1 DNA MER1_type 612 886 -88 2 723 1275 214 50 3 chrX 18142143 18142492 -148507804 - RLTR33 LTR ERVK -85 593 145 2 723 369 299 41 0 chrX 18142930 18143024 -148507272 + Arthur1 DNA Tip100 235 332 -3615 2 723 248 322 132 32 chrX 18143024 18143213 -148507083 - MER92B LTR ERV1 0 636 429 2 723 29561 109 30 27 chrX 18143213 18147995 -148502301 + Lx3_Mus LINE L1 7 5112 -774 2 723 1086 80 0 0 chrX 18147995 18148132 -148502164 + B1_Mus2 SINE Alu 2 138 -9 2 723 29561 103 10 21 chrX 18148132 18150079 -148500217 + Lx3_Mus LINE L1 5113 7009 0 2 723 405 39 0 0 chrX 18150215 18150266 -148500030 + (TTG)n Simple_repeat Simple_repeat 2 52 0 2 723 1231 63 0 0 chrX 18150267 18150425 -148499871 - B2_Mm2 SINE B2 -37 158 1 2 723 526 273 16 25 chrX 18150489 18150677 -148499619 - MER92B LTR ERV1 -408 228 3 2 723 691 326 9 35 chrX 18150698 18150927 -148499369 - MER2 DNA MER2_type -7 338 116 2 723 546 99 0 0 chrX 18150950 18151041 -148499255 + (CA)n Simple_repeat Simple_repeat 2 92 0 2 723 433 301 55 77 chrX 18151344 18151564 -148498732 + B3A SINE B2 2 216 0 2 723 22 0 0 0 chrX 18151564 18151586 -148498710 + AT_rich Low_complexity Low_complexity 1 22 0 2 723 272 250 83 0 chrX 18151588 18151672 -148498624 + Arthur1 DNA Tip100 3448 3538 -409 2 723 1109 97 0 6 chrX 18151676 18151842 -148498454 + (TTTC)n Simple_repeat Simple_repeat 2 166 0 2 723 5682 78 19 9 chrX 18151845 18152624 -148497672 - L1Md_F2 LINE L1 -13 6569 5783 2 723 7830 49 0 0 chrX 18152633 18154220 -148496076 - L1Md_F2 LINE L1 -14 6568 4982 2 723 4674 108 43 7 chrX 18154218 18154963 -148495333 - L1VL2 LINE L1 -5405 930 159 2 723 1269 162 97 30 chrX 18155137 18155404 -148494892 - Lx4A LINE L1 -3 7055 6771 2 723 245 263 60 24 chrX 18156068 18156161 -148494135 + MLT1H LTR MaLR 392 547 -2 2 723 1174 291 44 72 chrX 18156243 18156629 -148493667 - MTEa LTR MaLR -2 377 3 2 723 312 291 109 0 chrX 18157286 18157396 -148492900 - MER21B LTR ERV1 -21 842 721 2 723 1066 243 85 55 chrX 18158348 18158787 -148491509 + RMER15 LTR ERVL 2 536 -39 2 723 360 0 0 0 chrX 18158787 18158827 -148491469 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 723 1066 231 83 36 chrX 18158827 18158858 -148491438 + RMER15 LTR ERVL 537 573 -2 2 723 291 333 0 13 chrX 18158998 18159077 -148491219 + RSINE1 SINE B4 3 80 -85 2 723 989 288 177 0 chrX 18159086 18159419 -148490877 - MTD LTR MaLR -8 411 20 2 723 255 326 22 44 chrX 18159439 18159529 -148490767 + RSINE1 SINE B4 76 163 -2 2 723 315 0 0 0 chrX 18159567 18159602 -148490694 + (CTAAA)n Simple_repeat Simple_repeat 4 38 0 2 723 498 17 0 0 chrX 18159940 18159999 -148490297 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 723 243 295 184 26 chrX 18159999 18160150 -148490146 - Lx9 LINE L1 -175 7469 7300 2 723 4721 157 85 7 chrX 18160150 18161035 -148489261 - RMER17B LTR ERVK 0 958 5 2 723 243 295 184 26 chrX 18161035 18161116 -148489180 - Lx9 LINE L1 -345 7299 7201 2 723 5175 163 21 27 chrX 18161161 18162313 -148487983 + L1Md_T LINE L1 99 1205 -5411 2 723 34678 33 0 0 chrX 18162319 18166736 -148483560 + L1Md_T LINE L1 1170 5586 -297 2 723 7993 54 0 0 chrX 18166736 18167720 -148482576 + L1Md_T LINE L1 5587 6570 -12 2 723 588 65 0 0 chrX 18167731 18167808 -148482488 + (TCTA)n Simple_repeat Simple_repeat 3 79 0 2 723 1022 198 25 0 chrX 18167808 18168005 -148482291 - B3 SINE B2 -14 202 1 2 723 1327 304 61 46 chrX 18168005 18168638 -148481658 - Lx9 LINE L1 -695 6949 6191 2 723 338 91 0 18 chrX 18168638 18168694 -148481602 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 723 3459 262 72 35 chrX 18168694 18170104 -148480192 - Lx9 LINE L1 -1283 6190 4715 2 723 385 267 8 16 chrX 18170106 18170228 -148480068 - Lx9 LINE L1 -1066 4781 4661 2 723 216 182 0 0 chrX 18170846 18170890 -148479406 + GA-rich Low_complexity Low_complexity 1 44 0 2 723 337 316 10 10 chrX 18171364 18171460 -148478836 + RSINE1 SINE B4 53 148 -17 2 723 5389 41 11 0 chrX 18171592 18172256 -148478040 + L1Md_F3 LINE L1 5902 6572 -12 2 723 2528 152 78 4 chrX 18172271 18172774 -148477522 + RMER17D2 LTR ERVK 270 809 0 2 723 408 236 0 33 chrX 18173347 18173439 -148476857 - B1_Mur2 SINE Alu -1 148 60 2 723 1134 140 5 18 chrX 18173439 18173657 -148476639 + L1_Mur3 LINE L1 4835 5049 -831 2 723 1834 288 25 33 chrX 18173681 18174252 -148476044 + Lx5 LINE L1 6482 7047 -3 2 723 2272 213 30 22 chrX 18174343 18175041 -148475255 + L1_Mur2 LINE L1 648 1351 -4526 2 723 2349 122 58 0 chrX 18175037 18175414 -148474882 + L1_Mur2 LINE L1 5339 5737 -140 2 723 24825 134 24 8 chrX 18175413 18180895 -148469401 + L1_Mus3 LINE L1 1066 6633 -5 2 723 5821 199 38 8 chrX 18180879 18182168 -148468128 + Lx5 LINE L1 5713 7039 -11 2 723 423 55 13 52 chrX 18182261 18182338 -148467958 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 2 723 704 213 8 0 chrX 18182345 18182472 -148467824 - B1_Mur2 SINE Alu -9 140 13 2 723 1689 189 32 19 chrX 18182584 18182961 -148467335 - L1_Mur3 LINE L1 -558 5322 4939 2 723 4328 123 32 92 chrX 18182961 18183745 -148466551 + RMER19A LTR ERVK 1 737 0 2 723 1689 189 32 19 chrX 18183745 18183777 -148466519 - L1_Mur3 LINE L1 -942 4938 4908 2 723 7129 128 8 47 chrX 18183827 18185029 -148465267 - Lx3B LINE L1 0 6973 5819 2 723 1016 141 82 0 chrX 18185033 18185203 -148465093 - ORR1A2 LTR MaLR -51 276 93 2 723 712 143 68 0 chrX 18185215 18185362 -148464934 - L1_Mus3 LINE L1 -6 6632 6476 2 723 2726 106 39 0 chrX 18185372 18185788 -148464508 - Lx3B LINE L1 -96 5790 5359 2 723 31300 90 8 3 chrX 18185798 18191645 -148458651 - L1Md_F2 LINE L1 -1 6584 611 2 723 11548 136 48 9 chrX 18191670 18195098 -148455198 - Lx3B LINE L1 -519 5361 1289 2 723 1075 179 5 10 chrX 18195101 18195299 -148454997 - L1VL4 LINE L1 -6019 283 87 2 723 1501 185 75 51 chrX 18195329 18195700 -148454596 - ORR1C2 LTR MaLR -4 380 1 2 723 544 160 70 0 chrX 18195700 18195783 -148454513 - ORR1C2-int LTR MaLR -1 1369 1280 2 723 706 238 159 10 chrX 18195783 18195991 -148454305 - RLTR42 LTR ERVK 0 239 1 2 723 9741 155 96 9 chrX 18195991 18198009 -148452287 - RLTR42-int LTR ERVK 0 5522 3331 2 723 6425 165 35 68 chrX 18198019 18199509 -148450787 - RLTR42-int LTR ERVK -2552 2970 1531 2 723 2020 147 44 22 chrX 18200097 18200502 -148449794 - RLTR42-int LTR ERVK -4003 1519 1106 2 723 189 74 0 0 chrX 18200523 18200550 -148449746 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2 723 960 196 132 45 chrX 18200734 18201023 -148449273 - RLTR42-int LTR ERVK -4439 1083 770 2 723 285 197 81 40 chrX 18201023 18201097 -148449199 - RLTR25A LTR ERVK -561 542 466 2 723 1566 218 28 35 chrX 18201037 18201523 -148448773 - ORR1C2-int LTR MaLR -896 613 1 2 723 747 279 104 19 chrX 18202033 18202340 -148447956 + L1_Mur3 LINE L1 827 1159 -6553 2 723 33771 49 1 3 chrX 18202431 18208029 -148442267 + L1Md_T LINE L1 1 5589 -297 3 723 8477 33 0 0 chrX 18208029 18209025 -148441271 + L1Md_T LINE L1 5590 6585 0 3 723 760 321 18 32 chrX 18209152 18209429 -148440867 - B4A SINE B4 -18 274 2 3 723 387 203 120 32 chrX 18209478 18209636 -148440660 - MER65-int LTR ERV1 -2829 2042 1871 3 723 23 33 0 0 chrX 18209897 18209927 -148440369 + AT_rich Low_complexity Low_complexity 1 30 0 3 723 306 0 0 0 chrX 18209927 18209961 -148440335 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 723 252 0 0 0 chrX 18209961 18209988 -148440308 + (GA)n Simple_repeat Simple_repeat 1 28 0 3 723 344 281 106 30 chrX 18209991 18210123 -148440173 - RSINE1 SINE B4 -19 146 5 3 723 666 130 0 0 chrX 18210214 18210322 -148439974 + (TA)n Simple_repeat Simple_repeat 2 109 0 3 723 1105 291 35 29 chrX 18211168 18211508 -148438788 + ORR1E LTR MaLR 1 342 -17 3 723 447 264 38 0 chrX 18211535 18211641 -148438655 + MTEa LTR MaLR 1 110 -269 3 723 18401 162 146 11 chrX 18211682 18214647 -148435649 + L1_Mus3 LINE L1 504 3459 -2424 3 723 1925 78 26 4 chrX 18214647 18214916 -148435380 + L1_Mus1 LINE L1 6293 6567 0 3 723 18401 120 137 15 chrX 18214916 18217144 -148433152 + L1_Mus3 LINE L1 3460 6381 -257 3 723 565 73 23 39 chrX 18217146 18217274 -148433022 + (CAAAA)n Simple_repeat Simple_repeat 2 127 0 3 723 1543 114 16 4 chrX 18217277 18217523 -148432773 + L1_Mus3 LINE L1 6382 6630 -8 3 723 604 328 42 23 chrX 18217671 18217930 -148432366 + MT2A LTR ERVL 268 531 -2 3 723 1333 275 109 14 chrX 18217939 18218352 -148431944 + MTE-int LTR MaLR 8 459 -1121 3 723 684 219 58 0 chrX 18218381 18218536 -148431760 + L1_Mur3 LINE L1 520 683 -7029 3 723 414 309 0 43 chrX 18218575 18218690 -148431606 + MTE-int LTR MaLR 1028 1137 -443 3 723 734 282 72 12 chrX 18218699 18218988 -148431308 + ORR1E LTR MaLR 50 379 0 3 724 1003 292 126 74 chrX 18219193 18219861 -148430435 - MER21B LTR ERV1 -146 717 1 3 724 3644 70 8 4 chrX 18219940 18220427 -148429869 - RLTR1C LTR ERV1 -14 489 1 3 724 243 321 0 13 chrX 18220560 18220639 -148429657 - ID4_ SINE ID -4 79 2 3 724 338 376 8 16 chrX 18220868 18220995 -148429301 - LTR16A1 LTR ERVL -330 126 1 3 724 463 165 158 10 chrX 18221700 18221813 -148428483 - B1_Mus2 SINE Alu -11 137 1 3 724 447 292 31 49 chrX 18221967 18222129 -148428167 - RSINE1 SINE B4 -2 163 5 3 724 581 264 52 0 chrX 18222174 18222348 -148427948 - L1MB7 LINE L1 -94 6090 5908 3 724 231 202 25 12 chrX 18222361 18222441 -148427855 + CT-rich Low_complexity Low_complexity 1 81 0 3 724 522 83 0 0 chrX 18222440 18222512 -148427784 + (TCCC)n Simple_repeat Simple_repeat 3 74 0 3 724 265 290 0 28 chrX 18222518 18222589 -148427707 - ID4_ SINE ID -14 69 1 3 724 542 250 23 8 chrX 18222601 18222734 -148427562 - B1F1 SINE Alu -8 141 7 3 724 232 287 18 90 chrX 18222638 18222749 -148427547 - MT2B2 LTR ERVL -327 257 155 3 724 1137 257 132 26 chrX 18222749 18222943 -148427353 - L1MB7 LINE L1 -309 5875 5662 3 724 234 62 0 0 chrX 18222943 18222975 -148427321 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 3 724 1137 257 132 26 chrX 18222975 18223327 -148426969 - L1MB7 LINE L1 -523 5661 5272 3 724 12681 108 18 8 chrX 18223350 18226011 -148424285 - L1_Mus2 LINE L1 -1 6565 3883 3 724 9706 54 2 0 chrX 18226010 18227926 -148422370 - L1Md_F2 LINE L1 -12 6570 4653 3 724 16236 126 21 10 chrX 18227923 18231392 -148418904 - L1Md_F2 LINE L1 -1996 3887 380 3 724 315 279 53 29 chrX 18231412 18231582 -148418714 + L1M4 LINE L1 5083 5256 -890 3 724 948 224 63 35 chrX 18231608 18231962 -148418334 - LTRIS5 LTR ERV1 -3 509 126 3 724 4020 68 0 0 chrX 18231992 18232505 -148417791 - L1Md_F2 LINE L1 0 5883 5371 3 724 4527 96 1 19 chrX 18232516 18233165 -148417131 + L1Md_F2 LINE L1 5933 6570 -12 3 724 531 310 54 14 chrX 18233169 18233316 -148416980 - RSINE1 SINE B4 -10 155 3 3 724 960 57 0 0 chrX 18233331 18233454 -148416842 + (TA)n Simple_repeat Simple_repeat 2 124 0 3 724 216 0 0 0 chrX 18234622 18234646 -148415650 + (TC)n Simple_repeat Simple_repeat 2 25 0 3 724 682 263 61 51 chrX 18234728 18234924 -148415372 - B3A SINE B2 0 198 1 3 724 338 336 47 14 chrX 18235727 18235875 -148414421 - MIR SINE MIR -30 232 80 3 724 505 213 130 0 chrX 18236004 18236137 -148414159 + B3A SINE B2 1 150 -66 3 724 261 0 0 0 chrX 18236145 18236174 -148414122 + (TC)n Simple_repeat Simple_repeat 2 30 0 3 724 306 0 0 0 chrX 18236177 18236211 -148414085 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 724 810 269 128 24 chrX 18236454 18236714 -148413582 - MLT1C LTR MaLR -147 320 32 3 724 1672 37 5 9 chrX 18236714 18236932 -148413364 - L1Md_F2 LINE L1 -3 6579 6363 3 724 810 269 128 24 chrX 18236932 18236961 -148413335 - MLT1C LTR MaLR -436 31 2 3 724 645 80 0 0 chrX 18237502 18237590 -148412706 + (TC)n Simple_repeat Simple_repeat 2 89 0 3 724 738 37 269 0 chrX 18237891 18237999 -148412297 + B1_Mm SINE Alu 1 137 -10 3 724 198 0 0 0 chrX 18237999 18238021 -148412275 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 3 724 277 333 0 21 chrX 18238295 18238390 -148411906 - MLT1A1 LTR MaLR -65 343 251 3 724 251 310 99 0 chrX 18238566 18238637 -148411659 - ID4 SINE ID -4 79 2 3 724 1230 224 69 33 chrX 18238835 18239161 -148411135 + ORR1E LTR MaLR 13 379 0 3 724 361 320 31 0 chrX 18239441 18239538 -148410758 - MER5B DNA MER1_type -1 177 78 3 724 490 45 0 0 chrX 18240090 18240157 -148410139 + L1_Mus2 LINE L1 6498 6564 -2 3 724 265 270 112 0 chrX 18240749 18240838 -148409458 + MER5A1 DNA MER1_type 20 118 -48 3 724 598 281 7 0 chrX 18240838 18240973 -148409323 - ID_B1 SINE B4 -3 221 86 3 724 24 67 0 0 chrX 18241007 18241052 -148409244 + AT_rich Low_complexity Low_complexity 1 45 0 3 724 212 315 100 11 chrX 18241286 18241376 -148408920 - MIR3 SINE MIR -16 192 95 3 724 26 30 0 0 chrX 18241514 18241547 -148408749 + AT_rich Low_complexity Low_complexity 1 33 0 3 724 3353 103 28 8 chrX 18241548 18242048 -148408248 - L1_Mus3 LINE L1 -14 6624 6115 3 724 692 90 0 18 chrX 18242048 18242161 -148408135 + L1_Mus1 LINE L1 6457 6567 0 3 724 3667 102 39 1 chrX 18242260 18243080 -148407216 - L1_Mus3 LINE L1 -507 6131 5288 3 724 24763 75 30 7 chrX 18243074 18244544 -148405752 - L1Md_F2 LINE L1 -2 6580 4813 3 724 387 0 0 0 chrX 18244544 18244587 -148405709 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 724 24763 131 77 8 chrX 18244587 18244655 -148405641 - L1Md_F2 LINE L1 -1071 4812 4738 3 724 330 45 0 0 chrX 18244655 18244699 -148405597 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 3 724 24763 130 73 13 chrX 18244699 18248381 -148401915 - L1Md_F2 LINE L1 -1146 4737 1068 3 724 8351 77 6 13 chrX 18248378 18249594 -148400702 - L1_Mm LINE L1 -1374 4509 3364 3 724 8024 50 1 1 chrX 18249594 18250588 -148399708 + L1Md_F2 LINE L1 5587 6580 -2 3 724 6399 247 51 106 chrX 18250588 18252316 -148397980 - L1_Mm LINE L1 -2517 3363 1723 3 724 1373 172 37 51 chrX 18252333 18252683 -148397613 + RMER17C LTR ERVK 66 410 0 3 724 312 253 105 42 chrX 18252686 18252925 -148397371 - L1_Mm LINE L1 -4201 1679 1426 3 724 1642 179 99 22 chrX 18252943 18253298 -148396998 - ORR1C2 LTR MaLR -2 382 1 3 724 414 0 0 0 chrX 18253672 18253718 -148396578 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 724 198 0 0 0 chrX 18254316 18254338 -148395958 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 724 208 53 0 50 chrX 18255191 18255231 -148395065 + (TTG)n Simple_repeat Simple_repeat 2 39 0 3 724 330 202 24 37 chrX 18255279 18255361 -148394935 - HAL1-3A_ME LINE L1 -830 2028 1948 3 724 202 333 40 13 chrX 18255682 18255758 -148394538 + MIRm SINE MIR 199 276 0 3 724 216 67 0 0 chrX 18256291 18256321 -148393975 + (CAGGT)n Simple_repeat Simple_repeat 2 31 0 3 724 265 196 0 0 chrX 18256321 18256367 -148393929 - L5 LINE RTE -17 2248 2203 3 724 1296 116 16 0 chrX 18256591 18256780 -148393516 + B2_Mm2 SINE B2 1 192 -3 3 724 287 278 30 20 chrX 18257168 18257267 -148393029 + ORR1B1 LTR MaLR 5 104 -290 3 724 29 28 0 0 chrX 18257657 18257693 -148392603 + AT_rich Low_complexity Low_complexity 1 36 0 3 724 366 156 0 0 chrX 18257754 18257818 -148392478 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 724 945 108 0 21 chrX 18257818 18257960 -148392336 + B1_Mus1 SINE Alu 1 139 -9 3 724 1501 23 0 0 chrX 18258307 18258478 -148391818 + L1Md_T LINE L1 5416 5586 -297 3 724 8481 30 0 0 chrX 18258478 18259474 -148390822 + L1Md_T LINE L1 5587 6582 0 3 724 34 24 0 0 chrX 18259988 18260029 -148390267 + AT_rich Low_complexity Low_complexity 1 41 0 3 724 1136 282 24 20 chrX 18260188 18260485 -148389811 - Lx8 LINE L1 -285 7188 6891 3 724 1012 151 32 11 chrX 18260583 18260771 -148389525 + Lx9 LINE L1 6913 7104 -540 3 724 2036 167 64 5 chrX 18260771 18261193 -148389103 + Lx9 LINE L1 7193 7639 -5 3 724 27 29 0 0 chrX 18261323 18261357 -148388939 + AT_rich Low_complexity Low_complexity 1 34 0 3 724 21 57 0 0 chrX 18261371 18261406 -148388890 + AT_rich Low_complexity Low_complexity 1 35 0 3 724 754 281 64 101 chrX 18261890 18262187 -148388109 - MTEa LTR MaLR -93 286 1 3 724 3004 74 45 0 chrX 18262493 18262897 -148387399 + BGLII_Mus LTR ERVK 1 422 0 3 724 373 50 33 0 chrX 18263069 18263129 -148387167 + (TCTA)n Simple_repeat Simple_repeat 2 63 0 3 724 336 271 14 0 chrX 18263137 18263207 -148387089 - ID4_ SINE ID -11 72 2 3 724 21 36 0 0 chrX 18263247 18263275 -148387021 + AT_rich Low_complexity Low_complexity 1 28 0 3 724 188 333 0 44 chrX 18265032 18265123 -148385173 + MIRb SINE MIR 5 91 -177 3 724 1745 175 3 58 chrX 18265737 18266082 -148384214 - ORR1A3 LTR MaLR 0 326 1 3 724 2800 29 23 3 chrX 18266177 18266521 -148383775 + L1Md_F3 LINE L1 6220 6570 -14 3 724 4463 23 2 0 chrX 18266988 18267504 -148382792 + L1Md_T LINE L1 6066 6582 0 3 724 228 176 0 136 chrX 18267575 18267634 -148382662 + 4.5SRNA scRNA scRNA 44 94 0 3 724 254 306 20 20 chrX 18267615 18267715 -148382581 - Charlie4z DNA MER1_type -1 166 67 3 724 2279 134 3 3 chrX 18268953 18269298 -148380998 - ORR1A1 LTR MaLR -1 345 1 3 724 2981 226 160 91 chrX 18269298 18270517 -148379779 - ORR1A1-int LTR MaLR 0 1509 207 3 724 1119 254 19 4 chrX 18270517 18270782 -148379514 - Lx4A LINE L1 -349 6701 6433 3 724 347 227 47 8 chrX 18270782 18270911 -148379385 + Lx5 LINE L1 6001 6134 -916 3 724 24866 127 15 92 chrX 18270961 18272285 -148378011 - Lx4A LINE L1 -1062 5996 4701 3 724 1745 125 101 0 chrX 18272285 18272572 -148377724 + ORR1A2 LTR MaLR 1 316 -11 3 724 24866 127 15 92 chrX 18272572 18274135 -148376161 - Lx4A LINE L1 -1062 4700 3169 3 724 272 48 24 0 chrX 18274135 18274177 -148376119 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 724 24866 144 22 90 chrX 18274177 18276892 -148373404 - Lx4A LINE L1 -2709 3168 556 3 724 689 217 211 0 chrX 18276958 18277133 -148373163 - B3 SINE B2 -4 212 1 4 724 405 0 0 0 chrX 18277490 18277535 -148372761 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 724 328 305 12 0 chrX 18277722 18277804 -148372492 + MIRb SINE MIR 117 199 -69 4 724 412 286 80 9 chrX 18277807 18277920 -148372376 + B4A SINE B4 2 122 -170 4 724 272 231 92 8 chrX 18277947 18278090 -148372206 - L1_Rod LINE L1 -749 5394 5251 4 724 489 17 0 0 chrX 18278090 18278148 -148372148 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 4 724 571 209 0 22 chrX 18278148 18278285 -148372011 - L1_Rod LINE L1 -682 5165 5032 4 724 817 251 52 12 chrX 18278313 18278669 -148371627 - L1_Rod LINE L1 -1320 4820 4474 4 724 800 269 52 56 chrX 18278673 18279137 -148371159 - L1_Rod LINE L1 -2044 3803 3342 4 724 186 103 0 0 chrX 18279158 18279187 -148371109 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 4 724 1179 277 104 36 chrX 18279558 18280229 -148370067 + L1MB4 LINE L1 5463 6179 -1 4 724 268 286 24 36 chrX 18280294 18280461 -148369835 + Lx7 LINE L1 7514 7678 -18 4 724 4985 120 5 15 chrX 18280726 18281472 -148368824 - Lx2 LINE L1 -16 6981 6243 4 724 3270 176 16 0 chrX 18281472 18282096 -148368200 - L1_Mm LINE L1 -109 5774 5141 4 724 288 298 96 37 chrX 18282222 18282358 -148367938 + L2c LINE L2 3022 3165 -222 4 724 338 198 45 9 chrX 18283086 18283198 -148367098 + (TA)n Simple_repeat Simple_repeat 2 117 0 4 724 216 200 35 0 chrX 18283223 18283308 -148366988 + (TA)n Simple_repeat Simple_repeat 2 89 0 4 724 24 0 0 0 chrX 18283535 18283559 -148366737 + AT_rich Low_complexity Low_complexity 1 24 0 4 724 573 276 20 12 chrX 18283664 18283917 -148366379 + L1ME2z LINE L1 6190 6444 0 4 724 3876 65 4 33 chrX 18284169 18284712 -148365584 - L1Md_F2 LINE L1 0 6582 6065 4 724 704 256 50 27 chrX 18285438 18285659 -148364637 + MLT2C2 LTR ERVL 1 226 -238 4 724 372 258 97 157 chrX 18285742 18285839 -148364457 - ORR1E LTR MaLR 0 359 288 4 724 1314 109 5 10 chrX 18285839 18286034 -148364262 - B2_Mm2 SINE B2 0 195 2 4 724 372 258 97 157 chrX 18286034 18286152 -148364144 - ORR1E LTR MaLR -72 287 157 4 724 530 143 50 0 chrX 18286154 18286315 -148363981 + (CAGA)n Simple_repeat Simple_repeat 2 170 0 4 724 4504 102 44 50 chrX 18286336 18287092 -148363204 + RMER17A LTR ERVK 1 751 0 4 724 323 146 24 0 chrX 18287138 18287220 -148363076 + (CAGAGA)n Simple_repeat Simple_repeat 1 84 0 4 724 203 326 13 41 chrX 18287407 18287513 -148362783 - L2a LINE L2 -1 3425 3292 4 724 529 324 44 28 chrX 18287531 18287779 -148362517 - Tigger10 DNA Tigger -5 1838 1587 4 724 198 0 0 0 chrX 18288231 18288253 -148362043 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 4 724 528 314 0 0 chrX 18288352 18288492 -148361804 - ID_B1 SINE B4 -5 219 80 4 724 7442 59 3 1 chrX 18288769 18289786 -148360510 + L1_Mus1 LINE L1 5549 6567 0 4 724 779 118 108 16 chrX 18289803 18289932 -148360364 + B1_Mus1 SINE Alu 2 142 -6 4 724 288 0 0 0 chrX 18289933 18289965 -148360331 + (ATG)n Simple_repeat Simple_repeat 1 32 0 4 724 259 250 53 31 chrX 18290004 18290113 -148360183 - L1M4 LINE L1 -582 5602 5491 4 724 422 349 91 6 chrX 18290275 18290451 -148359845 + LTR16A1 LTR ERVL 133 323 -133 4 724 482 331 56 70 chrX 18291580 18291850 -148358446 - B4 SINE B4 -16 276 11 4 724 1638 156 6 89 chrX 18292249 18292608 -148357688 + ORR1A4 LTR MaLR 1 329 0 4 724 39426 8 0 1 chrX 18292691 18299891 -148350405 - L1Md_A LINE L1 0 6582 1 4 724 297 0 0 0 chrX 18299917 18299950 -148350346 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 724 1004 86 7 7 chrX 18299967 18300107 -148350189 + B1_Mm SINE Alu 7 146 -1 4 724 3074 209 109 0 chrX 18300209 18300971 -148349325 - Lx7 LINE L1 -338 7358 6514 4 724 6342 133 10 18 chrX 18300961 18302127 -148348169 - Lx LINE L1 -1 6653 5608 4 724 442 304 22 0 chrX 18302135 18302273 -148348023 - B1_Mur2 SINE Alu -7 142 2 4 724 306 301 17 62 chrX 18302878 18303055 -148347241 - L1MC4 LINE L1 -128 7914 7746 4 724 852 341 63 51 chrX 18303097 18303511 -148346785 + MLT1C LTR MaLR 45 463 -4 4 724 2787 97 35 10 chrX 18303584 18303981 -148346315 - MTB_Mm LTR MaLR 0 407 1 4 724 840 304 72 14 chrX 18304553 18304839 -148345457 + MER2 DNA MER2_type 2 304 -41 4 724 5516 122 38 10 chrX 18304839 18305717 -148344579 - RLTR13D6 LTR ERVK 0 902 1 4 724 1464 74 16 0 chrX 18306152 18306341 -148343955 - B2_Mm2 SINE B2 -2 193 2 4 724 219 291 138 12 chrX 18306756 18306836 -148343460 + MIRc SINE MIR 82 171 -97 4 724 1126 68 0 26 chrX 18307009 18307160 -148343136 - B1_Mus1 SINE Alu 0 148 2 4 724 222 37 0 0 chrX 18307160 18307187 -148343109 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 4 724 357 43 0 0 chrX 18307773 18307820 -148342476 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 724 404 319 67 24 chrX 18307822 18307986 -148342310 - MLT2D LTR ERVL -56 358 188 4 724 1419 184 12 0 chrX 18307995 18308239 -148342057 - ORR1A4 LTR MaLR -8 321 75 4 724 1760 114 26 4 chrX 18308237 18308501 -148341795 + ORR1A2 LTR MaLR 58 327 0 4 724 244 316 85 19 chrX 18308505 18308824 -148341472 - L1M3b LINE L1 -826 5521 5182 4 724 530 223 127 18 chrX 18308836 18309119 -148341177 - L1M3b LINE L1 -1559 4788 4475 4 724 378 0 0 0 chrX 18309391 18309433 -148340863 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 724 856 312 40 16 chrX 18309461 18309832 -148340464 - Lx9 LINE L1 -213 7431 7052 4 724 1026 263 38 32 chrX 18309839 18310373 -148339923 - L1M3b LINE L1 -2412 3935 3399 4 724 721 196 42 7 chrX 18310377 18310521 -148339775 - B1_Mur4 SINE Alu 0 150 2 4 724 233 314 28 19 chrX 18310580 18310678 -148339618 - L1M3b LINE L1 -5771 510 410 4 724 609 105 0 0 chrX 18310678 18310773 -148339523 + (TA)n Simple_repeat Simple_repeat 2 96 0 4 724 756 300 32 24 chrX 18311015 18311261 -148339035 + MT2A LTR ERVL 1 248 -285 4 724 2687 192 52 14 chrX 18311479 18312158 -148338138 + L1_Mus1 LINE L1 560 1208 -5411 4 724 21738 115 24 12 chrX 18312155 18317058 -148333238 + L1_Mus1 LINE L1 1784 6569 -1 4 724 4151 74 0 2 chrX 18317755 18318283 -148332013 - L1_Mus1 LINE L1 0 6567 6041 4 724 921 226 203 16 chrX 18318539 18318854 -148331442 - MTE2b LTR MaLR -4 375 2 4 724 4255 209 18 11 chrX 18318948 18319941 -148330355 + Lx2B LINE L1 5910 7009 -49 4 724 24000 119 11 46 chrX 18320030 18325243 -148325053 - L1_Mus2 LINE L1 -102 6464 1442 4 724 32849 86 4 6 chrX 18325248 18331380 -148318916 - L1Md_F2 LINE L1 0 6582 466 4 724 2265 144 93 4 chrX 18331381 18332195 -148318101 - L1_Mus2 LINE L1 -2460 1454 556 4 724 651 133 0 0 chrX 18332289 18332394 -148317902 + (TC)n Simple_repeat Simple_repeat 1 105 0 4 724 458 287 0 9 chrX 18332438 18332547 -148317749 - PB1D10 SINE Alu 0 117 10 4 724 672 316 30 17 chrX 18332749 18333222 -148317074 - L1MEd LINE L1 -3213 2933 2455 4 724 375 226 179 7 chrX 18333232 18333412 -148316884 + ORR1D1 LTR MaLR 138 376 -8 4 724 989 220 23 9 chrX 18334118 18334338 -148315958 + Lx6 LINE L1 7212 7434 -26 4 724 587 321 57 0 chrX 18334490 18334683 -148315613 + ID_B1 SINE B4 6 209 -15 4 724 22 35 0 0 chrX 18334836 18334865 -148315431 + AT_rich Low_complexity Low_complexity 1 29 0 4 724 29 0 0 0 chrX 18335125 18335154 -148315142 + AT_rich Low_complexity Low_complexity 1 29 0 4 724 4795 123 66 14 chrX 18335225 18336070 -148314226 + RMER17B LTR ERVK 1 952 -6 4 724 508 330 49 89 chrX 18336133 18336336 -148313960 + B3A SINE B2 3 197 -1 4 724 1265 27 0 0 chrX 18336367 18336514 -148313782 + B1_Mm SINE Alu 1 147 0 4 724 198 0 0 0 chrX 18336514 18336536 -148313760 + (A)n Simple_repeat Simple_repeat 1 22 0 4 724 29 47 0 0 chrX 18336634 18336677 -148313619 + AT_rich Low_complexity Low_complexity 1 43 0 4 724 385 115 41 10 chrX 18336700 18336797 -148313499 + (TA)n Simple_repeat Simple_repeat 2 101 0 4 724 234 0 0 0 chrX 18336797 18336823 -148313473 + (GA)n Simple_repeat Simple_repeat 2 27 0 4 724 1254 269 28 22 chrX 18336909 18337266 -148313030 - Lx6 LINE L1 -136 7324 6966 4 724 3658 113 66 34 chrX 18337264 18337943 -148312353 - Lx3A LINE L1 -418 6563 5863 4 724 22 94 0 0 chrX 18337950 18338014 -148312282 + AT_rich Low_complexity Low_complexity 1 64 0 4 724 312 357 51 74 chrX 18338027 18338242 -148312054 - L1MEd LINE L1 -5348 788 579 4 724 463 286 19 0 chrX 18338258 18338419 -148311877 - L1MA6 LINE L1 -8 6292 6129 4 724 814 328 51 8 chrX 18339079 18339725 -148310571 + L1_Mur3 LINE L1 1243 1916 -3964 4 724 348 210 0 0 chrX 18339780 18339861 -148310435 + A-rich Low_complexity Low_complexity 1 81 0 4 724 773 185 20 33 chrX 18339893 18340044 -148310252 + B1_Mur3 SINE Alu 1 149 0 4 724 770 49 0 10 chrX 18340062 18340166 -148310130 + (GAAA)n Simple_repeat Simple_repeat 2 104 0 4 724 1766 201 22 30 chrX 18340299 18340669 -148309627 - ORR1B2 LTR MaLR 0 367 1 4 724 532 270 43 33 chrX 18340669 18340846 -148309450 - MTC-int LTR MaLR -860 398 220 4 724 5710 219 31 14 chrX 18340846 18341841 -148308455 + Lx5 LINE L1 5721 6730 -320 4 724 3927 131 127 83 chrX 18341841 18342706 -148307590 + RMER17A2 LTR ERVK 1 903 -3 4 724 5710 219 31 14 chrX 18342706 18343005 -148307291 + Lx5 LINE L1 6731 7037 -13 4 724 21 0 0 0 chrX 18343012 18343033 -148307263 + AT_rich Low_complexity Low_complexity 1 21 0 4 724 2968 18 3 0 chrX 18344139 18344475 -148305821 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 724 20211 11 2 0 chrX 18344475 18346829 -148303467 - IAPEz-int LTR ERVK 0 6481 4123 4 724 886 73 24 0 chrX 18346831 18346954 -148303342 - IAPEz-int LTR ERVK -2770 4910 4785 4 724 1728 115 4 4 chrX 18346951 18347213 -148303083 - IAPEz-int LTR ERVK -5183 2497 2236 4 724 424 38 0 0 chrX 18347212 18347265 -148303031 - IAPEz-int LTR ERVK -5070 1411 1359 4 724 4170 66 71 9 chrX 18347265 18347893 -148302403 - IAPEz-int LTR ERVK -5819 662 3 4 724 2994 15 3 0 chrX 18347895 18348231 -148302065 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 724 465 259 42 12 chrX 18348529 18348697 -148301599 - L1MD1 LINE L1 -8 6234 6062 4 724 314 365 59 12 chrX 18348715 18348970 -148301326 - L1MC3 LINE L1 -1770 6015 5749 4 724 560 278 135 0 chrX 18349003 18349311 -148300985 - L1MC3 LINE L1 -548 5616 5271 4 724 2053 176 2 12 chrX 18349382 18349807 -148300489 - L1_Mur2 LINE L1 -1763 4114 3694 4 90 8362 163 25 5 chrX 18349802 18352104 -148298192 - Lx LINE L1 -5 6649 4316 4 725 4215 157 28 79 chrX 18352104 18353054 -148297242 + RLTR13D6 LTR ERVK 1 902 0 4 725 8362 170 33 7 chrX 18353054 18353185 -148297111 - Lx LINE L1 -1562 4315 4153 4 725 3534 123 3 16 chrX 18353180 18354240 -148296056 + L1VL4 LINE L1 194 1425 -2134 5 725 4457 170 20 3 chrX 18354247 18355140 -148295156 + L1_Mur2 LINE L1 3621 4528 -1349 5 725 3559 111 10 24 chrX 18355134 18355557 -148294739 - L1VL2 LINE L1 -1591 2024 1611 5 725 3180 51 2 8 chrX 18355557 18355953 -148294343 + MTA_Mm LTR MaLR 3 396 0 5 725 3559 111 10 24 chrX 18355953 18356148 -148294148 - L1VL2 LINE L1 -2005 1610 1415 5 725 258 32 0 0 chrX 18356153 18356184 -148294112 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 5 725 27 0 0 0 chrX 18356374 18356401 -148293895 + AT_rich Low_complexity Low_complexity 1 27 0 5 725 5699 109 41 11 chrX 18356719 18358183 -148292113 - L1VL2 LINE L1 -2105 1510 1 5 725 348 91 0 0 chrX 18358183 18358238 -148292058 - L1VL2 LINE L1 -6127 208 154 5 725 2875 95 44 4 chrX 18358236 18358763 -148291533 - L1VL4 LINE L1 -2197 1362 793 5 725 2861 89 5 5 chrX 18358763 18359158 -148291138 - MTA_Mm LTR MaLR 0 396 2 5 725 2875 128 57 59 chrX 18359158 18359581 -148290715 - L1VL4 LINE L1 -5510 792 395 5 725 311 312 114 9 chrX 18359584 18359794 -148290502 - L1M4 LINE L1 -3565 2581 2350 5 725 740 108 0 0 chrX 18359802 18359913 -148290383 - Lx3A LINE L1 -474 6507 6397 5 725 1508 141 86 4 chrX 18359914 18360171 -148290125 + RLTR9A LTR ERVK 2 279 -89 5 725 1255 178 4 4 chrX 18360178 18360421 -148289875 + RLTR45-int LTR ERVK 2957 3199 -4045 5 725 6219 232 65 48 chrX 18360522 18361081 -148289215 + ETnERV2-int LTR ERVK 2195 2575 -4831 5 725 216 86 0 0 chrX 18361081 18361116 -148289180 + (CACCT)n Simple_repeat Simple_repeat 3 37 0 5 725 6219 198 82 57 chrX 18361116 18362371 -148287925 + ETnERV2-int LTR ERVK 2576 3927 -3479 5 725 468 77 0 0 chrX 18362371 18362436 -148287860 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 725 252 0 0 0 chrX 18362437 18362465 -148287831 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 725 6219 198 82 57 chrX 18362465 18362622 -148287674 + ETnERV2-int LTR ERVK 3928 4071 -3335 5 725 2260 111 0 59 chrX 18362622 18362995 -148287301 + L1_Mus2 LINE L1 6216 6566 0 5 725 21 0 0 0 chrX 18363204 18363225 -148287071 + AT_rich Low_complexity Low_complexity 1 21 0 5 725 355 221 22 5 chrX 18363392 18363483 -148286813 - ORR1D2 LTR MaLR -14 405 296 5 725 2036 106 111 9 chrX 18363500 18363844 -148286452 + Lx LINE L1 6258 6636 -18 5 725 3233 141 36 19 chrX 18363876 18364468 -148285828 + RMER16-int LTR ERVK 2999 3589 -1817 5 725 4023 63 2 4 chrX 18364468 18364981 -148285315 - L1Md_F2 LINE L1 -19 6563 6052 5 725 1369 261 23 48 chrX 18364981 18365226 -148285070 + RMER16-int LTR ERVK 5756 5995 -1411 5 725 1536 140 37 20 chrX 18365256 18365543 -148284753 + RLTR9A LTR ERVK 109 385 -30 5 725 3188 112 4 23 chrX 18365543 18366075 -148284221 - Lx3A LINE L1 -579 6402 5881 5 725 2805 111 31 0 chrX 18366075 18366499 -148283797 + Lx3A LINE L1 6545 6981 0 5 725 231 312 38 19 chrX 18366529 18366686 -148283610 - L1MDb LINE L1 -3812 2725 2566 5 725 207 88 0 0 chrX 18366929 18366963 -148283333 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 725 1136 141 16 0 chrX 18367031 18367215 -148283081 - B2_Mm2 SINE B2 -8 187 1 5 725 27 0 0 0 chrX 18367258 18367285 -148283011 + AT_rich Low_complexity Low_complexity 1 27 0 5 725 569 273 223 28 chrX 18367341 18367526 -148282770 - L1MDb LINE L1 -4584 2049 1849 5 725 1142 85 6 0 chrX 18367526 18367690 -148282606 + (TC)n Simple_repeat Simple_repeat 2 166 0 5 725 569 273 223 28 chrX 18367690 18367903 -148282393 - L1MDb LINE L1 -4785 1848 1573 5 725 598 300 52 16 chrX 18367933 18368360 -148281936 - L1MDb LINE L1 -5000 1540 1099 5 725 310 222 0 0 chrX 18368392 18368464 -148281832 + L1_Mur3 LINE L1 2429 2500 -3380 5 725 1750 173 29 16 chrX 18368466 18368848 -148281448 + L1_Mur3 LINE L1 2615 3001 -2879 5 725 4614 260 90 46 chrX 18370010 18371383 -148278913 - L1M3c LINE L1 -831 5379 3958 5 725 1630 206 23 69 chrX 18371383 18371775 -148278521 - ORR1D1 LTR MaLR 0 374 1 5 725 4614 264 101 35 chrX 18371775 18372509 -148277787 - L1M3c LINE L1 -2247 3957 3144 5 725 414 0 0 0 chrX 18372509 18372555 -148277741 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 725 4614 264 101 35 chrX 18372555 18373195 -148277101 - L1M3c LINE L1 -3061 3143 2452 5 725 393 223 231 10 chrX 18373248 18373352 -148276944 - RSINE1 SINE B4 -34 131 5 5 725 274 230 59 67 chrX 18373355 18373490 -148276806 - L1M3c LINE L1 -3741 2466 2333 5 725 533 304 69 29 chrX 18373668 18373841 -148276455 + B3A SINE B2 1 180 -18 5 725 33714 37 1 0 chrX 18373890 18379680 -148270616 + L1Md_T LINE L1 1 5589 -297 5 725 9010 6 0 0 chrX 18379680 18380676 -148269620 + L1Md_T LINE L1 5590 6585 0 5 725 3860 29 0 0 chrX 18380679 18381160 -148269136 + L1Md_T LINE L1 5106 5586 -297 5 725 8359 40 0 0 chrX 18381160 18382181 -148268115 + L1Md_T LINE L1 5587 6582 0 5 725 627 299 85 41 chrX 18382209 18382526 -148267770 - L1M3c LINE L1 -5657 484 154 5 725 355 220 50 0 chrX 18382543 18382643 -148267653 + Ricksha_c DNA MuDR 341 445 -1603 5 725 1198 89 77 12 chrX 18383223 18383495 -148266801 - L1Md_F2 LINE L1 -4 6578 6216 5 725 3577 58 11 0 chrX 18383495 18384069 -148266227 + L1Md_F2 LINE L1 5487 6066 -516 5 725 384 133 0 0 chrX 18384060 18384120 -148266176 + L1Md_F2 LINE L1 6189 6248 -336 5 725 328 311 29 0 chrX 18384153 18384256 -148266040 + MTEb LTR MaLR 256 361 -18 5 725 3486 103 117 7 chrX 18384384 18384942 -148265354 - L1Md_F2 LINE L1 0 6582 5964 5 725 16820 95 16 1 chrX 18384943 18388207 -148262089 - L1Md_F LINE L1 -2224 3659 342 5 725 2782 82 5 14 chrX 18388382 18388410 -148261886 - L1_Mus2 LINE L1 -517 6049 6026 5 725 2984 66 5 20 chrX 18388410 18388812 -148261484 + MTA_Mm LTR MaLR 1 396 0 5 725 2782 82 5 14 chrX 18388812 18389201 -148261095 - L1_Mus2 LINE L1 -541 6025 5636 5 725 3344 93 8 34 chrX 18389201 18389701 -148260595 + L1_Mus2 LINE L1 6080 6566 0 5 725 257 355 50 29 chrX 18390456 18390595 -148259701 - L2c LINE L2 0 3387 3246 5 725 808 293 61 102 chrX 18390629 18390990 -148259306 + ORR1E LTR MaLR 7 352 -7 5 725 3690 148 85 57 chrX 18391124 18392005 -148258291 - RMER17A2 LTR ERVK 0 906 1 5 725 3928 140 78 8 chrX 18392196 18392865 -148257431 - RMER6D LTR ERVK -4 716 1 5 725 844 167 52 46 chrX 18392923 18393135 -148257161 + RLTR9C LTR ERVK 1 206 -209 5 725 1925 178 16 8 chrX 18393135 18393521 -148256775 - L1_Mur1 LINE L1 -48 5838 5450 5 725 9855 78 8 1 chrX 18393519 18395535 -148254761 - L1Md_F2 LINE L1 -12 6570 4534 5 725 11326 121 53 29 chrX 18395528 18398152 -148252144 - L1Md_F2 LINE L1 -2956 2927 245 5 725 1141 168 25 4 chrX 18398150 18398389 -148251907 - L1_Mur2 LINE L1 -419 5458 5215 5 725 1062 107 0 0 chrX 18398560 18398700 -148251596 + B1_Mus1 SINE Alu 1 140 -8 5 725 1571 167 8 101 chrX 18399597 18400071 -148250225 + RMER17C LTR ERVK 16 439 -519 5 725 940 225 167 42 chrX 18400080 18400410 -148249886 + RMER17C-int LTR ERVK 2 372 -2866 5 725 1741 148 34 72 chrX 18400679 18401262 -148249034 + RLTR1B LTR ERV1 1 624 0 5 725 260 111 0 22 chrX 18401337 18401383 -148248913 + (TCTCCC)n Simple_repeat Simple_repeat 6 50 0 5 725 1657 117 27 11 chrX 18401388 18401648 -148248648 - RLTR13D6 LTR ERVK -12 890 627 5 725 582 107 79 18 chrX 18401674 18401788 -148248508 - L1Md_F2 LINE L1 0 6582 6462 5 725 3939 88 68 20 chrX 18402111 18402545 -148247751 - RLTR13D6 LTR ERVK -313 801 179 5 725 1083 60 8 0 chrX 18402545 18402679 -148247617 + B1_Mm SINE Alu 1 135 -12 5 725 387 0 0 0 chrX 18402679 18402722 -148247574 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 5 725 3939 85 68 20 chrX 18402722 18402893 -148247403 - RLTR13D6 LTR ERVK -724 178 7 5 725 1505 132 25 0 chrX 18402915 18403158 -148247138 - ETnERV3-int LTR ERVK -31 5777 5529 5 725 3272 142 76 114 chrX 18403154 18404094 -148246202 - ETnERV2-int LTR ERVK -1163 6081 4396 5 725 5219 134 31 20 chrX 18404102 18405077 -148245219 - ETnERV2-int LTR ERVK -3934 3472 2488 5 725 636 150 154 13 chrX 18405431 18405580 -148244716 + RMER17C-int LTR ERVK 1503 1672 -1566 5 725 722 208 132 47 chrX 18405605 18405862 -148244434 + RMER17C-int LTR ERVK 1741 2019 -1219 5 725 932 154 22 0 chrX 18405862 18406044 -148244252 + RMER17C-int LTR ERVK 2174 2359 -879 5 725 2257 199 32 90 chrX 18406550 18407086 -148243210 - RLTR18B LTR ERVK 0 512 8 5 725 29611 84 47 11 chrX 18407275 18413141 -148237155 - L1Md_F2 LINE L1 -13 6569 482 5 725 390 238 61 8 chrX 18413190 18413321 -148236975 - Charlie1 DNA MER1_type 0 2781 2644 5 725 261 256 277 17 chrX 18413326 18413445 -148236851 - Charlie1 DNA MER1_type -2594 187 38 5 725 694 189 15 22 chrX 18414028 18414152 -148236144 + B1_Mus1 SINE Alu 12 135 -13 5 725 219 36 0 0 chrX 18414152 18414180 -148236116 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 5 725 703 277 137 56 chrX 18414339 18414733 -148235563 - RMER10A LTR ERVL -5 437 12 5 725 465 148 44 33 chrX 18414811 18414902 -148235394 + MT2A LTR ERVL 1 92 -441 5 725 335 229 0 119 chrX 18414899 18414984 -148235312 + MT2A LTR ERVL 466 543 -58 5 725 312 27 0 0 chrX 18414984 18415021 -148235275 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 5 725 335 229 0 119 chrX 18415021 18415044 -148235252 + MT2A LTR ERVL 544 561 -40 5 725 231 167 0 0 chrX 18415046 18415088 -148235208 + (TATG)n Simple_repeat Simple_repeat 2 43 0 5 725 1032 184 25 110 chrX 18415119 18415364 -148234932 + URR1B DNA MER1_type 1 224 -1 5 725 440 298 40 60 chrX 18415554 18415572 -148234724 - CYRA11_Mm Unknown Y-chromosome -230 387 307 5 725 1032 161 116 0 chrX 18415572 18415771 -148234525 + URR1B DNA MER1_type 4 225 0 5 725 440 298 40 60 chrX 18415771 18415804 -148234492 - CYRA11_Mm Unknown Y-chromosome -230 306 143 5 725 239 0 32 0 chrX 18416800 18416831 -148233465 + (CTATA)n Simple_repeat Simple_repeat 3 34 0 5 725 824 126 0 16 chrX 18416833 18416962 -148233334 + RMER17C LTR ERVK 284 410 0 5 725 2423 178 80 91 chrX 18416963 18417654 -148232642 + RMER17C-int LTR ERVK 1 683 -2555 5 725 7717 135 117 38 chrX 18418005 18419429 -148230867 + RMER17C-int LTR ERVK 1276 2898 -340 5 725 246 32 0 0 chrX 18419429 18419460 -148230836 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 725 7717 139 113 39 chrX 18419460 18419797 -148230499 + RMER17C-int LTR ERVK 2899 3237 -1 5 725 2004 152 22 29 chrX 18419797 18420209 -148230087 + RMER17C LTR ERVK 1 409 -1 5 725 2074 51 77 0 chrX 18420922 18421196 -148229100 - ORR1A1 LTR MaLR -51 295 1 5 725 6591 51 2 2 chrX 18421196 18422042 -148228254 - ORR1A1-int LTR MaLR 0 1792 947 5 725 24 67 0 0 chrX 18422973 18423018 -148227278 + AT_rich Low_complexity Low_complexity 1 45 0 5 725 521 276 104 52 chrX 18423596 18424371 -148225925 - L1M5 LINE L1 -574 5610 4805 5 725 400 318 68 39 chrX 18424393 18424599 -148225697 + RLTR16 LTR ERVK 32 243 -262 5 725 543 255 37 20 chrX 18424931 18425175 -148225121 - L1M5 LINE L1 -1369 4777 4530 5 725 488 288 131 14 chrX 18425195 18425417 -148224879 - L1MD LINE L1 -1756 4390 4143 5 725 1140 78 0 0 chrX 18425426 18425567 -148224729 - B1_Mm SINE Alu -6 141 1 5 725 28 0 0 0 chrX 18425576 18425604 -148224692 + AT_rich Low_complexity Low_complexity 1 28 0 5 725 536 312 119 6 chrX 18425656 18425833 -148224463 + B3 SINE B2 1 197 -19 5 725 1108 138 37 160 chrX 18425943 18426324 -148223972 - Lx9 LINE L1 -1 7643 7310 5 725 3024 186 41 23 chrX 18426291 18426902 -148223394 - Lx9 LINE L1 -607 7037 6416 5 725 420 257 0 0 chrX 18427032 18427137 -148223159 + Lx9 LINE L1 6307 6411 -1233 5 725 313 303 74 74 chrX 18427161 18427350 -148222946 - L1M5 LINE L1 -2122 4024 3836 5 725 716 243 0 0 chrX 18427360 18427496 -148222800 + B1_Mur2 SINE Alu 4 139 -10 5 725 493 279 117 25 chrX 18427509 18427877 -148222419 - L1M5 LINE L1 -2372 3774 3373 5 725 655 250 106 6 chrX 18427945 18428106 -148222190 + B3 SINE B2 40 216 0 5 725 601 282 133 26 chrX 18428111 18428333 -148221963 - L1MEc LINE L1 -2782 3537 3297 5 725 662 199 14 0 chrX 18428333 18428474 -148221822 + Lx2A1 LINE L1 6860 7002 -6 5 725 601 282 133 26 chrX 18428474 18428876 -148221420 - L1MEc LINE L1 -3023 3296 2846 5 725 22 56 0 0 chrX 18428939 18428975 -148221321 + AT_rich Low_complexity Low_complexity 1 36 0 5 725 307 286 67 0 chrX 18428988 18429156 -148221140 - L1MEc LINE L1 -3717 2602 2424 5 725 470 282 152 30 chrX 18429266 18429800 -148220496 - L1MEc LINE L1 -4112 2288 1690 5 725 3311 183 41 29 chrX 18429823 18430548 -148219748 - Lx2B LINE L1 -6 6994 6261 5 725 24 0 0 0 chrX 18430563 18430587 -148219709 + AT_rich Low_complexity Low_complexity 1 24 0 5 725 3728 208 46 75 chrX 18430591 18430951 -148219345 - Lx7 LINE L1 -2 7694 7355 5 725 252 100 0 0 chrX 18430951 18430991 -148219305 + (TAGA)n Simple_repeat Simple_repeat 4 43 0 5 725 3728 208 46 75 chrX 18430991 18431710 -148218586 - Lx7 LINE L1 -342 7354 6646 5 725 30289 88 5 8 chrX 18431711 18436688 -148213608 + L1Md_F2 LINE L1 631 5585 -298 5 725 7505 71 8 8 chrX 18436689 18437682 -148212614 + L1Md_F2 LINE L1 5587 6579 -3 5 725 761 236 0 0 chrX 18437789 18437950 -148212346 - Lx6 LINE L1 -818 6642 6482 5 725 1125 207 54 35 chrX 18438123 18438438 -148211858 + RMER17C LTR ERVK 1 321 -89 5 725 237 75 18 36 chrX 18438573 18438628 -148211668 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 6 725 949 147 62 0 chrX 18439076 18439253 -148211043 - B2_Mm2 SINE B2 -7 188 1 6 725 495 354 59 36 chrX 18440021 18440241 -148210055 - LTR33 LTR ERVL -63 452 228 6 725 428 281 109 102 chrX 18442223 18442508 -148207788 + L1M5 LINE L1 4912 5198 -948 6 725 378 299 44 29 chrX 18442538 18442821 -148207475 + L1M5 LINE L1 5291 5582 -582 6 725 973 90 15 0 chrX 18442822 18442956 -148207340 + B1_Mus1 SINE Alu 1 136 -12 6 725 519 17 0 0 chrX 18442957 18443017 -148207279 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 6 725 222 402 19 0 chrX 18443156 18443263 -148207033 - PB1D7 SINE Alu -2 118 10 6 725 377 54 18 0 chrX 18443263 18443319 -148206977 + (TCTG)n Simple_repeat Simple_repeat 2 58 0 6 725 219 69 0 0 chrX 18443319 18443347 -148206949 + (TA)n Simple_repeat Simple_repeat 2 30 0 6 725 242 210 40 16 chrX 18443386 18443512 -148206784 + (TA)n Simple_repeat Simple_repeat 1 129 0 6 725 491 292 83 15 chrX 18443527 18443732 -148206564 - ID_B1 SINE B4 -5 219 1 6 725 240 130 0 0 chrX 18443732 18443778 -148206518 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 6 725 970 199 110 9 chrX 18443880 18444098 -148206198 - RMER17C LTR ERVK 0 410 171 6 725 223 374 22 0 chrX 18444198 18444289 -148206007 + L2a LINE L2 3308 3400 -26 6 725 323 321 9 9 chrX 18444313 18444426 -148205870 - Tigger5 DNA MER2_type -1 2405 2293 6 725 309 314 23 0 chrX 18444428 18444514 -148205782 - Tigger5 DNA MER2_type -2168 238 151 6 725 522 254 67 7 chrX 18444654 18444789 -148205507 - RMER30 DNA MER1_type -46 156 14 6 725 182 270 176 20 chrX 18444964 18445066 -148205230 - L2b LINE L2 -1 3374 3257 6 725 217 265 20 0 chrX 18447597 18447646 -148202650 - MIRm SINE MIR 0 276 227 6 725 1912 73 18 18 chrX 18447676 18447954 -148202342 - Lx3_Mus LINE L1 0 7009 6732 6 725 7454 81 16 6 chrX 18448008 18449046 -148201250 - L1_Mur1 LINE L1 0 5886 4838 6 725 2335 98 2 103 chrX 18449037 18449253 -148201043 - L1_Mur1 LINE L1 -4275 1611 1436 6 725 1107 84 7 0 chrX 18449253 18449407 -148200889 - L1_Mus2 LINE L1 -4 6562 6408 6 725 2492 175 130 58 chrX 18449407 18450472 -148199824 - L1_Mur1 LINE L1 -4451 1435 14 6 725 23 0 0 0 chrX 18450475 18450498 -148199798 + AT_rich Low_complexity Low_complexity 1 23 0 6 725 188 32 0 88 chrX 18451523 18451557 -148198739 + (TTTTTG)n Simple_repeat Simple_repeat 3 33 0 6 725 318 50 0 0 chrX 18451965 18452005 -148198291 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 725 1050 171 18 81 chrX 18453609 18454110 -148196186 + RMER17C LTR ERVK 16 439 -519 6 725 361 364 20 82 chrX 18454479 18454596 -148195700 + MIRb SINE MIR 24 124 -144 6 725 430 238 50 0 chrX 18454596 18454697 -148195599 - PB1D10 SINE Alu -8 109 4 6 725 361 364 20 82 chrX 18454697 18454824 -148195472 + MIRb SINE MIR 125 253 -15 6 725 198 0 0 0 chrX 18455022 18455044 -148195252 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 6 725 225 352 0 0 chrX 18455048 18455119 -148195177 - ID4 SINE ID -8 75 5 6 725 207 0 0 0 chrX 18456030 18456053 -148194243 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 725 188 393 20 33 chrX 18457850 18458000 -148192296 + L4 LINE RTE 1266 1413 -616 6 725 1010 225 13 9 chrX 18458329 18458553 -148191743 + URR1B DNA MER1_type 1 225 0 6 725 851 53 9 0 chrX 18459114 18459227 -148191069 + (TTTTC)n Simple_repeat Simple_repeat 1 114 0 6 725 635 95 9 0 chrX 18459230 18459335 -148190961 + (TCC)n Simple_repeat Simple_repeat 1 106 0 6 725 605 314 78 68 chrX 18460448 18460847 -148189449 + MLT1H1 LTR MaLR 153 555 0 6 725 342 0 0 0 chrX 18460882 18460920 -148189376 + (TC)n Simple_repeat Simple_repeat 1 38 0 6 725 318 322 22 11 chrX 18461091 18461182 -148189114 + LTR40b LTR ERVL 17 108 -354 6 725 254 283 116 7 chrX 18461317 18461459 -148188837 + LTR40b LTR ERVL 307 519 0 6 725 243 0 0 0 chrX 18461745 18461772 -148188524 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 725 184 364 61 0 chrX 18462135 18462234 -148188062 + MIR SINE MIR 100 204 -58 6 725 374 247 76 35 chrX 18462493 18462665 -148187631 + MER121 Unknown Unknown 102 280 -132 6 725 392 210 111 0 chrX 18462897 18462978 -148187318 - B1F SINE Alu -14 135 46 6 725 300 274 78 0 chrX 18463053 18463155 -148187141 - MIRb SINE MIR -75 193 84 6 725 1322 290 38 97 chrX 18463653 18464452 -148185844 + L1MB8 LINE L1 3730 4473 -1673 6 725 545 291 43 0 chrX 18464452 18464593 -148185703 + B1F1 SINE Alu 1 147 -2 6 725 327 224 0 15 chrX 18464593 18464661 -148185635 + ID4 SINE ID 3 69 -14 6 725 1322 287 38 99 chrX 18464661 18464879 -148185417 + L1MB8 LINE L1 4474 4697 -1449 6 725 248 266 10 50 chrX 18464876 18464975 -148185321 + L1MB8 LINE L1 4864 4958 -1188 6 725 23 33 0 0 chrX 18465001 18465031 -148185265 + AT_rich Low_complexity Low_complexity 1 30 0 6 725 1819 274 72 32 chrX 18465082 18466060 -148184236 + L1MB8 LINE L1 5153 6173 -5 6 725 351 60 0 0 chrX 18466927 18466977 -148183319 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 725 478 223 137 57 chrX 18466980 18467242 -148183054 + L1MD LINE L1 2481 2763 -3383 6 725 441 313 0 9 chrX 18467255 18467371 -148182925 - MTE2a LTR MaLR -34 345 231 6 725 606 308 124 18 chrX 18467417 18467642 -148182654 + B4A SINE B4 1 249 -43 6 725 275 240 53 15 chrX 18467660 18467791 -148182505 + L1MD LINE L1 3163 3298 -2848 6 725 656 229 17 62 chrX 18467806 18467872 -148182424 - ORR1B1 LTR MaLR 0 394 327 6 725 270 56 0 0 chrX 18467872 18467908 -148182388 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 6 725 656 229 17 62 chrX 18467908 18468018 -148182278 - ORR1B1 LTR MaLR -68 326 226 6 725 677 12 0 12 chrX 18468074 18468157 -148182139 + (TTTC)n Simple_repeat Simple_repeat 3 84 0 6 725 340 289 55 27 chrX 18468165 18468311 -148181985 - MER66-int LTR ERV1 -4041 2635 2486 6 725 483 262 118 51 chrX 18469110 18469347 -148180949 + RLTR9A LTR ERVK 116 368 0 6 725 25252 130 26 65 chrX 18469460 18474758 -148175538 + L1VL1 LINE L1 641 5743 -140 6 725 7502 142 9 18 chrX 18474744 18476101 -148174195 + L1VL1 LINE L1 2723 4067 -1816 6 90 35575 36 8 7 chrX 18476098 18481190 -148169106 + L1Md_T LINE L1 498 5586 -297 6 726 8262 40 0 0 chrX 18481190 18482185 -148168111 + L1Md_T LINE L1 5587 6581 -1 6 726 7007 137 5 7 chrX 18482237 18483395 -148166901 + L1VL1 LINE L1 4067 5222 -661 6 726 1239 129 5 11 chrX 18483395 18483583 -148166713 + RLTR13B1 LTR ERVK 1 187 -706 6 726 9800 157 62 45 chrX 18483583 18485952 -148164344 - RMER16-int LTR ERVK -2947 4297 1223 6 726 1108 77 32 0 chrX 18485953 18486108 -148164188 + B2_Mm1t SINE B2 1 160 -33 6 726 360 0 0 0 chrX 18486108 18486148 -148164148 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 6 726 1747 113 25 7 chrX 18486148 18486425 -148163871 - RMER16-int LTR ERVK -4186 1220 939 6 726 389 173 24 47 chrX 18486455 18486540 -148163756 - RLTR9A LTR ERVK -285 83 1 6 726 356 312 56 51 chrX 18486738 18486946 -148163350 + MLT2D LTR ERVL 143 354 -60 6 726 281 324 95 54 chrX 18487387 18487534 -148162762 + L2a LINE L2 3273 3425 -1 6 726 1874 204 200 48 chrX 18487576 18488095 -148162201 + RMER19B LTR ERVK 305 902 0 6 726 22 35 0 0 chrX 18488167 18488196 -148162100 + AT_rich Low_complexity Low_complexity 1 29 0 6 726 228 35 0 0 chrX 18488584 18488613 -148161683 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 726 914 155 28 17 chrX 18488669 18488846 -148161450 + URR1B DNA MER1_type 47 225 0 6 726 827 331 32 57 chrX 18489141 18489295 -148161001 - MLT1C LTR MaLR -104 363 210 6 726 366 61 0 0 chrX 18489295 18489344 -148160952 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 6 726 1001 73 0 7 chrX 18489344 18489481 -148160815 - B1_Mus2 SINE Alu -10 137 2 6 726 827 331 32 57 chrX 18489481 18489696 -148160600 - MLT1C LTR MaLR -258 209 3 6 726 225 0 0 0 chrX 18489872 18489897 -148160399 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 6 726 1018 228 5 30 chrX 18489897 18490096 -148160200 - B3 SINE B2 -16 200 7 6 726 381 43 0 0 chrX 18490408 18490455 -148159841 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 726 534 296 56 0 chrX 18490467 18490592 -148159704 - RSINE1 SINE B4 -16 149 18 6 726 2546 189 62 12 chrX 18490693 18491192 -148159104 - RLTR11A LTR ERVK -4 524 1 6 726 221 250 0 91 chrX 18493094 18493160 -148157136 - RSINE1 SINE B4 -103 62 3 6 726 977 326 45 17 chrX 18494006 18494359 -148155937 - MLT1A0 LTR MaLR -2 363 1 6 726 325 239 168 0 chrX 18494965 18495132 -148155164 + L1MEc LINE L1 1743 1937 -4463 6 726 235 310 172 94 chrX 18495134 18495182 -148155114 - MER58A DNA MER1_type -1 223 177 6 726 238 253 184 0 chrX 18495182 18495269 -148155027 + PB1D7 SINE Alu 1 103 -17 6 726 235 310 172 94 chrX 18495269 18495423 -148154873 - MER58A DNA MER1_type -48 176 5 6 726 723 169 0 15 chrX 18495500 18495632 -148154664 + ORR1C1 LTR MaLR 247 376 -2 6 726 240 246 0 0 chrX 18495755 18495812 -148154484 - L1P5 LINE L1 -665 5491 5435 6 726 22 0 0 0 chrX 18495902 18495924 -148154372 + AT_rich Low_complexity Low_complexity 1 22 0 6 726 3015 55 35 2 chrX 18496030 18496429 -148153867 - L1Md_F3 LINE L1 0 6584 6173 6 726 245 293 0 0 chrX 18496447 18496522 -148153774 - L1M4 LINE L1 -2160 3986 3912 6 726 432 0 0 0 chrX 18496703 18496751 -148153545 + (TC)n Simple_repeat Simple_repeat 1 48 0 6 726 180 125 0 0 chrX 18496830 18496862 -148153434 + (TC)n Simple_repeat Simple_repeat 1 32 0 6 726 287 234 31 0 chrX 18496944 18497008 -148153288 - ID4 SINE ID -16 67 2 6 726 398 297 33 17 chrX 18497023 18497143 -148153153 - B1F SINE Alu -8 141 20 6 726 257 200 33 0 chrX 18499512 18499572 -148150724 + L1ME1 LINE L1 6117 6178 -1 6 726 773 300 81 30 chrX 18499582 18499853 -148150443 + B4A SINE B4 1 285 -7 6 726 552 106 0 0 chrX 18499862 18499956 -148150340 + (CA)n Simple_repeat Simple_repeat 1 94 0 6 726 182 349 11 78 chrX 18500152 18500242 -148150054 - L2a LINE L2 -1 3425 3342 1 726 274 259 103 0 chrX 18500984 18501066 -148149230 + MER5A DNA MER1_type 22 123 -66 2 726 1236 272 95 21 chrX 18501388 18502285 -148148011 - L1MB5 LINE L1 -43 6137 5153 3 726 757 269 29 0 chrX 18502287 18502462 -148147834 + B3A SINE B2 1 180 -18 4 726 464 293 68 35 chrX 18502540 18502558 -148147738 - L1MB5 LINE L1 -1017 5129 5117 3 726 4740 128 37 0 chrX 18502558 18503269 -148147027 - RMER19A LTR ERVK 0 737 1 5 726 464 293 68 35 chrX 18503269 18503561 -148146735 - L1MB5 LINE L1 -1030 5116 4809 3 726 671 247 83 11 chrX 18503595 18503775 -148146521 - B3A SINE B2 -5 193 1 6 726 372 22 0 0 chrX 18504036 18504081 -148146215 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 726 826 271 19 19 chrX 18504105 18504372 -148145924 - L1MA4A LINE L1 -376 5927 5661 8 726 1926 220 47 13 chrX 18504389 18504858 -148145438 + RCHARR1 DNA MER1_type 135 619 -355 9 726 5623 94 6 1 chrX 18504889 18505668 -148144628 + L1_Mus3 LINE L1 5847 6629 -9 1 726 24 0 0 0 chrX 18505668 18505692 -148144604 + AT_rich Low_complexity Low_complexity 1 24 0 1 726 4184 112 21 87 chrX 18505695 18506499 -148143797 + RMER17A LTR ERVK 1 751 0 1 726 450 270 134 6 chrX 18506521 18506700 -148143596 - B3 SINE B2 -13 203 2 1 726 1818 243 43 66 chrX 18507676 18508236 -148142060 + Lx7 LINE L1 6884 7430 -266 1 726 336 48 0 0 chrX 18508245 18508287 -148142009 + (TTG)n Simple_repeat Simple_repeat 2 43 0 1 726 1282 104 16 0 chrX 18508366 18508549 -148141747 - B2_Mm2 SINE B2 -6 189 4 1 726 246 97 47 31 chrX 18508741 18508805 -148141491 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 1 726 381 75 0 0 chrX 18508806 18508859 -148141437 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 726 328 324 69 41 chrX 18509222 18509367 -148140929 + RSINE1 SINE B4 5 153 -12 1 726 471 48 0 0 chrX 18509369 18509431 -148140865 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 726 281 338 80 12 chrX 18510083 18510245 -148140051 - MIRb SINE MIR -36 232 60 2 726 237 422 49 54 chrX 18510851 18511054 -148139242 + LTR16A1 LTR ERVL 181 382 -74 2 726 1533 307 68 8 chrX 18511077 18511668 -148138628 - Lx8 LINE L1 -1 7472 6847 2 726 36219 3 0 0 chrX 18511700 18516491 -148133805 - L1Md_A LINE L1 0 6582 1792 2 726 28 48 0 0 chrX 18516579 18516621 -148133675 + AT_rich Low_complexity Low_complexity 1 42 0 2 726 700 217 0 23 chrX 18516667 18516787 -148133509 + B1_Mur1 SINE Alu 21 140 -9 2 726 534 43 0 0 chrX 18516787 18516856 -148133440 + (CA)n Simple_repeat Simple_repeat 2 70 0 2 726 700 217 0 23 chrX 18516856 18516867 -148133429 + B1_Mur1 SINE Alu 141 149 0 2 726 448 290 63 32 chrX 18517038 18517323 -148132973 + L1MA9 LINE L1 5994 6287 -25 2 726 360 0 0 0 chrX 18517406 18517446 -148132850 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 726 837 277 84 9 chrX 18517464 18517785 -148132511 + L1MC4 LINE L1 5283 5627 -2255 3 726 461 320 0 0 chrX 18518068 18518190 -148132106 - Tigger5 DNA MER2_type -1 2405 2284 3 726 2851 262 56 19 chrX 18518193 18519065 -148131231 + RCHARR1 DNA MER1_type 5 908 -66 3 726 1059 181 28 9 chrX 18519067 18519284 -148131012 - MERVL_2A-int LTR ERVL -4432 1329 1109 3 726 559 211 158 25 chrX 18519284 18519507 -148130789 - RMER6D LTR ERVK -355 401 172 3 726 1834 307 38 15 chrX 18520354 18520887 -148129409 - Lx5 LINE L1 -33 7017 6473 3 726 225 254 0 0 chrX 18520928 18520991 -148129305 + Lx9 LINE L1 7562 7624 -20 3 726 34 24 0 0 chrX 18521004 18521045 -148129251 + AT_rich Low_complexity Low_complexity 1 41 0 3 726 2152 126 12 40 chrX 18521125 18521529 -148128767 - RLTR19-int LTR ERVK -4114 2023 1631 3 726 296 271 111 28 chrX 18521538 18521682 -148128614 - Lx9 LINE L1 -206 7438 7283 3 726 998 128 0 6 chrX 18521733 18521906 -148128390 + (GGAGA)n Simple_repeat Simple_repeat 5 176 0 4 726 240 345 60 32 chrX 18521906 18522253 -148128043 + L1MC4 LINE L1 7095 7451 -591 3 726 290 272 74 6 chrX 18522253 18522377 -148127919 - B1F1 SINE Alu -26 124 4 4 726 450 357 130 2 chrX 18522660 18522832 -148127464 - MLT1F1 LTR MaLR -83 486 274 4 726 381 279 64 96 chrX 18522877 18522895 -148127401 - CYRA11_Mm Unknown Y-chromosome -213 404 327 4 726 1003 176 20 25 chrX 18522895 18523093 -148127203 + URR1B DNA MER1_type 6 202 -23 4 726 381 279 64 96 chrX 18523093 18523127 -148127169 - CYRA11_Mm Unknown Y-chromosome -213 326 163 4 726 31219 92 10 5 chrX 18523130 18528292 -148122004 + L1Md_F2 LINE L1 400 5584 -299 4 726 7259 78 7 3 chrX 18528294 18529284 -148121012 + L1Md_F2 LINE L1 5587 6580 -2 4 726 183 42 0 0 chrX 18529309 18529333 -148120963 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 726 939 267 83 38 chrX 18529340 18529833 -148120463 - MT2B LTR ERVL -17 584 1 4 726 337 260 0 0 chrX 18530018 18530091 -148120205 - MLT1F1 LTR MaLR -496 73 1 4 726 5495 110 36 17 chrX 18530140 18531007 -148119289 - Lx LINE L1 0 6654 5772 4 726 3413 148 36 16 chrX 18531007 18531104 -148119192 - Lx LINE L1 -292 5591 5503 4 726 358 19 18 36 chrX 18531113 18531169 -148119127 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 5 726 1062 97 0 14 chrX 18531169 18531305 -148118991 - B1_Mus1 SINE Alu -12 136 2 5 726 3413 148 36 16 chrX 18531305 18531819 -148118477 - Lx LINE L1 -381 5502 4968 4 726 231 315 0 11 chrX 18532328 18532418 -148117878 + L1MA5 LINE L1 5508 5596 -704 5 726 482 282 53 15 chrX 18532487 18532620 -148117676 - B1F1 SINE Alu 0 149 12 5 726 967 278 103 7 chrX 18532630 18533199 -148117097 + L1MA5 LINE L1 5660 6300 0 5 726 281 350 14 7 chrX 18533282 18533426 -148116870 + L1MC4 LINE L1 7222 7366 -516 5 726 405 336 60 26 chrX 18533496 18533762 -148116534 + L1MC4 LINE L1 7526 7800 -242 5 726 264 371 41 35 chrX 18533871 18534016 -148116280 + MLT2B5 LTR ERVL 180 325 -392 5 726 261 314 150 17 chrX 18534057 18534177 -148116119 + MLT2B5 LTR ERVL 419 554 0 5 726 234 337 60 0 chrX 18534377 18534460 -148115836 + ORR1E LTR MaLR 52 139 -220 5 726 184 290 0 68 chrX 18534721 18534795 -148115501 - L2 LINE L2 -769 2650 2582 5 726 859 159 12 24 chrX 18534821 18534989 -148115307 + ORR1B2 LTR MaLR 1 166 -228 5 726 429 178 0 73 chrX 18535010 18535119 -148115177 - RMER1B Other Other -3 1063 963 5 726 1144 165 40 5 chrX 18535119 18535320 -148114976 + ORR1B2 LTR MaLR 160 367 0 5 726 393 129 0 0 chrX 18535419 18535481 -148114815 - Lx4A LINE L1 -180 6878 6817 6 726 432 162 0 0 chrX 18535483 18535551 -148114745 - ORR1A3 LTR MaLR 0 326 259 6 726 1277 155 168 39 chrX 18535551 18535985 -148114311 + RMER1B Other Other 568 1057 -9 6 726 842 235 39 68 chrX 18536130 18536409 -148113887 + Lx7 LINE L1 7426 7696 0 6 726 387 0 0 0 chrX 18536724 18536767 -148113529 + (TAGA)n Simple_repeat Simple_repeat 3 45 0 6 726 485 289 0 0 chrX 18537316 18537420 -148112876 + PB1D10 SINE Alu 1 104 -13 6 726 233 263 18 0 chrX 18537648 18537705 -148112591 + ID4 SINE ID 13 70 -13 6 726 499 279 37 19 chrX 18537789 18537950 -148112346 + LTR90B LTR LTR 601 764 -32 6 726 466 276 35 35 chrX 18538279 18538448 -148111848 - Lx7 LINE L1 -41 7655 7487 6 726 334 177 210 40 chrX 18538455 18538555 -148111741 - MLT1B LTR MaLR -248 142 26 6 726 477 0 0 0 chrX 18538686 18538739 -148111557 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 726 224 341 77 0 chrX 18538893 18538984 -148111312 + L2a LINE L2 3316 3413 -13 7 726 4644 157 31 0 chrX 18539553 18540305 -148109991 + L1VL2 LINE L1 14 788 -5547 7 726 4255 86 7 26 chrX 18540304 18540843 -148109453 + L1VL2 LINE L1 5048 5586 -297 7 726 7904 58 0 4 chrX 18540843 18541830 -148108466 + L1Md_F2 LINE L1 5587 6569 -13 7 726 6208 167 76 154 chrX 18541830 18544242 -148106054 + L1VL2 LINE L1 1203 5652 -231 7 726 9539 124 18 5 chrX 18544264 18546592 -148103704 - L1_Mus3 LINE L1 -15 6623 4266 7 726 305 237 86 0 chrX 18546877 18546970 -148103326 - RMER30 DNA MER1_type -85 117 17 7 726 421 241 88 22 chrX 18547137 18547273 -148103023 - MER58A DNA MER1_type -1 223 79 7 726 16678 160 13 8 chrX 18547548 18551107 -148099189 - L1_Mus3 LINE L1 -1589 4294 718 7 726 21 71 0 0 chrX 18551265 18551307 -148098989 + AT_rich Low_complexity Low_complexity 1 42 0 7 726 33 73 0 0 chrX 18551652 18551720 -148098576 + AT_rich Low_complexity Low_complexity 1 68 0 7 726 673 308 96 17 chrX 18551720 18552139 -148098157 - L1MB8 LINE L1 -9 6169 5718 8 726 387 153 34 34 chrX 18552358 18552446 -148097850 - Lx6 LINE L1 -9 7451 7364 8 726 2080 199 7 15 chrX 18552545 18552953 -148097343 - L1_Mur2 LINE L1 -6103 609 205 8 726 329 254 113 48 chrX 18552978 18553164 -148097132 - L1M3e LINE L1 -3205 3898 3701 8 726 566 292 117 9 chrX 18553173 18553387 -148096909 - L1M3e LINE L1 -6709 321 85 8 726 617 283 34 2 chrX 18553540 18553734 -148096562 + B3A SINE B2 1 199 -17 8 726 360 0 0 0 chrX 18553739 18553779 -148096517 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 8 726 7221 96 6 4 chrX 18553844 18554852 -148095444 - L1_Mus1 LINE L1 -1 6566 5587 8 726 14129 119 17 6 chrX 18554851 18557423 -148092873 - L1_Mm LINE L1 -1956 3927 1330 8 726 993 182 11 0 chrX 18557432 18557619 -148092677 - B2_Mm1t SINE B2 -4 189 1 8 726 245 288 120 63 chrX 18557638 18557938 -148092358 - L1MDa LINE L1 -966 5571 5255 8 726 226 192 174 53 chrX 18558050 18558182 -148092114 - L1MDa LINE L1 -1676 4861 4714 8 726 1813 54 0 0 chrX 18558202 18558425 -148091871 - L1_Mus1 LINE L1 0 6567 6345 9 726 298 225 176 40 chrX 18558456 18558581 -148091715 - L1MDa LINE L1 -3722 2815 2674 8 726 1082 289 164 71 chrX 18558598 18559944 -148090352 - L1MDa LINE L1 -4027 2606 1147 8 726 3732 53 12 62 chrX 18559944 18560463 -148089833 + MT2_Mm LTR ERVL 1 493 0 9 726 1082 282 79 103 chrX 18560463 18560614 -148089682 - L1MDa LINE L1 -5487 1146 988 8 726 294 224 17 17 chrX 18560621 18560680 -148089616 - MTEb-int LTR MaLR -1518 62 4 9 726 430 360 7 0 chrX 18560683 18560819 -148089477 - MTEb LTR MaLR 0 379 243 9 726 3583 186 137 40 chrX 18560832 18561778 -148088518 + Lx9 LINE L1 6606 7643 -1 9 726 407 273 9 0 chrX 18561836 18561962 -148088334 - L1MC4a LINE L1 -307 7688 7466 9 726 396 135 0 0 chrX 18562092 18562166 -148088130 + (CAAGG)n Simple_repeat Simple_repeat 2 75 0 9 726 387 0 0 0 chrX 18563114 18563157 -148087139 + (TC)n Simple_repeat Simple_repeat 2 44 0 9 726 282 115 0 0 chrX 18563711 18563763 -148086533 + (TTA)n Simple_repeat Simple_repeat 3 54 0 9 726 37 39 0 0 chrX 18565210 18565261 -148085035 + AT_rich Low_complexity Low_complexity 1 51 0 9 726 906 180 0 0 chrX 18565261 18565422 -148084874 + Lx5 LINE L1 6277 6437 -613 9 726 606 89 0 0 chrX 18565679 18565769 -148084527 + (TTTTG)n Simple_repeat Simple_repeat 3 92 0 1 726 1305 169 40 4 chrX 18566081 18566330 -148083966 + Lx5 LINE L1 4467 4724 -1156 1 726 2557 198 45 9 chrX 18566328 18566983 -148083313 + Lx5 LINE L1 5294 5979 -1071 1 726 21750 68 136 4 chrX 18567095 18569038 -148081258 - L1Md_F2 LINE L1 -12 6570 4634 1 726 302 0 0 26 chrX 18569038 18569077 -148081219 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 726 21750 100 199 15 chrX 18569077 18572523 -148077773 - L1Md_F2 LINE L1 -1250 4633 238 1 726 1224 289 43 69 chrX 18572811 18573186 -148077110 - MTEa LTR MaLR -7 372 8 1 726 391 291 81 15 chrX 18573185 18573321 -148076975 - MTEa-int LTR MaLR -4 1576 1432 1 726 1024 294 61 41 chrX 18573321 18573683 -148076613 - MTD LTR MaLR -50 369 1 1 726 2692 286 51 22 chrX 18573683 18574447 -148075849 - MTEa-int LTR MaLR -139 1441 656 1 726 561 180 0 0 chrX 18574447 18574547 -148075749 + L1_Mur1 LINE L1 5376 5475 -411 1 726 3393 162 38 21 chrX 18574669 18575300 -148074996 + RLTR26 LTR ERVK 1 642 0 1 726 308 257 14 14 chrX 18575370 18575441 -148074855 - HAL1-3A_ME LINE L1 -813 2045 1975 1 726 211 344 0 0 chrX 18575441 18575502 -148074794 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 726 569 272 24 37 chrX 18575514 18575678 -148074618 - RSINE1 SINE B4 -1 164 3 1 726 231 36 0 0 chrX 18576453 18576481 -148073815 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 1 726 1175 61 0 7 chrX 18576557 18576705 -148073591 + B1_Mus1 SINE Alu 2 148 0 1 726 1861 278 31 8 chrX 18576734 18577217 -148073079 - Lx7 LINE L1 -602 7094 6601 1 726 634 323 10 63 chrX 18577587 18577792 -148072504 + ID_B1 SINE B4 6 199 -25 1 726 365 301 88 0 chrX 18577733 18577846 -148072450 + B1F SINE Alu 25 147 -2 1 726 713 239 0 0 chrX 18577909 18578039 -148072257 + B1_Mur1 SINE Alu 9 138 -11 1 726 29 28 0 0 chrX 18578085 18578121 -148072175 + AT_rich Low_complexity Low_complexity 1 36 0 1 726 200 378 58 3 chrX 18578217 18578347 -148071949 + MIR SINE MIR 5 140 -68 1 726 314 344 21 10 chrX 18578470 18578567 -148071729 + MIR3 SINE MIR 9 106 -102 1 726 338 345 34 0 chrX 18578573 18578692 -148071604 + MTEa LTR MaLR 1 123 -256 1 726 8993 102 8 1 chrX 18579399 18581457 -148068839 - L1_Mus1 LINE L1 0 6567 4497 1 726 354 102 0 0 chrX 18581457 18581506 -148068790 + L1_Mm LINE L1 5047 5095 -788 1 726 2604 45 12 6 chrX 18581510 18581843 -148068453 + L1Md_F2 LINE L1 6248 6582 0 1 726 495 48 0 0 chrX 18581849 18581912 -148068384 - L1_Mus1 LINE L1 -1376 4507 4445 1 726 443 70 14 0 chrX 18581932 18582003 -148068293 - L1Md_F2 LINE L1 0 6582 6511 1 726 7869 82 3 58 chrX 18582004 18584071 -148066225 + L1Md_F LINE L1 113 2062 -3821 1 726 5121 134 32 8 chrX 18584069 18586392 -148063904 - L1_Mus1 LINE L1 -3836 2047 425 1 726 273 304 17 26 chrX 18586776 18586891 -148063405 + Lx7 LINE L1 6987 7100 -596 1 726 451 264 113 30 chrX 18586906 18587136 -148063160 + Lx8 LINE L1 7197 7445 -28 1 726 1349 75 32 0 chrX 18587136 18587322 -148062974 + B2_Mm2 SINE B2 2 193 -2 1 726 25 65 0 0 chrX 18587378 18587424 -148062872 + AT_rich Low_complexity Low_complexity 1 46 0 1 726 473 262 85 27 chrX 18587628 18587876 -148062420 + L1_Mur3 LINE L1 5199 5483 -400 1 726 39 22 0 0 chrX 18587968 18588014 -148062282 + AT_rich Low_complexity Low_complexity 1 46 0 1 726 3290 78 23 0 chrX 18588148 18588582 -148061714 - L1_Mus1 LINE L1 0 6567 6124 1 726 1260 75 108 0 chrX 18588582 18588768 -148061528 + L1Md_F2 LINE L1 5904 6109 -473 1 726 579 225 116 2 chrX 18588811 18589039 -148061257 + L1MA4 LINE L1 5599 5925 -375 1 726 224 190 0 33 chrX 18589266 18589326 -148060970 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 1 726 461 290 120 8 chrX 18589728 18590113 -148060183 + L1_Rod LINE L1 993 1412 -4435 1 726 245 159 16 0 chrX 18590335 18590398 -148059898 + CT-rich Low_complexity Low_complexity 1 64 0 1 726 1007 228 19 5 chrX 18590418 18590630 -148059666 + RMER5 LTR ERV1 1 215 -319 1 726 573 268 43 10 chrX 18590655 18590862 -148059434 + L1_Rod LINE L1 1452 1665 -4182 1 726 371 115 0 0 chrX 18590860 18590912 -148059384 - L1_Mur3 LINE L1 -1366 4514 4463 1 726 1624 241 114 33 chrX 18590910 18591455 -148058841 - L1Md_F LINE L1 -5619 900 312 1 726 1113 276 32 36 chrX 18591477 18591973 -148058323 + L1_Rod LINE L1 2460 2953 -2894 1 726 2069 120 104 3 chrX 18593386 18593712 -148056584 + Lx3_Mus LINE L1 6651 7009 0 1 726 561 288 104 28 chrX 18593742 18594127 -148056169 + L1_Mur3 LINE L1 3030 3450 -2430 1 726 1238 51 17 22 chrX 18594127 18594306 -148055990 + L1Md_F2 LINE L1 6405 6582 0 1 726 561 289 107 28 chrX 18594306 18594452 -148055844 + L1_Mur3 LINE L1 3450 3611 -2266 1 726 266 210 0 31 chrX 18594475 18594539 -148055757 + A-rich Low_complexity Low_complexity 3 64 0 1 726 684 67 0 0 chrX 18594545 18594635 -148055661 + (GGGGA)n Simple_repeat Simple_repeat 3 92 0 1 726 776 328 60 43 chrX 18594678 18595143 -148055153 + Lx8 LINE L1 6999 7471 -2 1 726 639 284 95 17 chrX 18595923 18596102 -148054194 - B3 SINE B2 -23 193 1 1 726 617 299 117 20 chrX 18596719 18596813 -148053483 + B4A SINE B4 2 96 -196 1 726 495 0 0 0 chrX 18596813 18596868 -148053428 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 726 255 125 0 0 chrX 18596868 18596907 -148053389 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 726 617 299 117 20 chrX 18596907 18597060 -148053236 + B4A SINE B4 97 273 -19 1 726 474 33 0 0 chrX 18597113 18597173 -148053123 + (GA)n Simple_repeat Simple_repeat 2 61 0 1 726 215 419 94 0 chrX 18597371 18597488 -148052808 - L2b LINE L2 -10 3365 3238 1 726 366 23 0 0 chrX 18597521 18597564 -148052732 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 726 692 295 124 26 chrX 18597581 18597846 -148052450 - B4 SINE B4 0 292 2 1 726 1130 88 0 0 chrX 18598023 18598171 -148052125 + B1_Mus1 SINE Alu 1 148 0 1 726 20497 106 15 2 chrX 18599025 18602806 -148047490 - L1_Mus1 LINE L1 0 6654 2742 1 726 2661 143 1 85 chrX 18602801 18603723 -148046573 - L1_Mus1 LINE L1 -2361 1553 725 1 726 467 257 43 7 chrX 18603725 18603866 -148046430 - L1_Mus1 LINE L1 -5807 809 664 1 726 362 241 86 81 chrX 18603882 18604149 -148046147 - L1VL1 LINE L1 -5933 485 45 1 726 420 20 0 0 chrX 18605121 18605170 -148045126 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 726 598 237 15 0 chrX 18605259 18605394 -148044902 - B1_Mur1 SINE Alu -11 138 2 1 726 200 34 0 33 chrX 18605545 18605575 -148044721 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 726 755 116 8 0 chrX 18605803 18605924 -148044372 + (GGAA)n Simple_repeat Simple_repeat 4 125 0 1 726 240 163 0 0 chrX 18606119 18606162 -148044134 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1 726 551 263 0 7 chrX 18606162 18606300 -148043996 - Lx6 LINE L1 -23 7437 7301 1 726 31603 78 7 4 chrX 18606314 18611491 -148038805 + L1Md_F2 LINE L1 392 5586 -297 1 90 7735 55 17 0 chrX 18611491 18612470 -148037826 + L1Md_F2 LINE L1 5587 6582 0 1 727 390 301 7 35 chrX 18612470 18612591 -148037705 - Lx6 LINE L1 -182 7278 7160 1 727 922 271 10 14 chrX 18612838 18613120 -148037176 - Lx6 LINE L1 -311 7149 6817 1 727 5089 178 78 155 chrX 18613177 18614848 -148035448 - L1_Mur3 LINE L1 -10 5870 4328 1 727 425 233 223 5 chrX 18614844 18615068 -148035228 - Lx9 LINE L1 -1215 6429 6157 1 727 396 293 8 33 chrX 18615201 18615321 -148034975 + PB1D10 SINE Alu 1 117 0 1 727 21 57 0 0 chrX 18615621 18615656 -148034640 + AT_rich Low_complexity Low_complexity 1 35 0 1 727 663 13 0 0 chrX 18615897 18615973 -148034323 + (TC)n Simple_repeat Simple_repeat 2 77 0 1 727 630 71 0 0 chrX 18615976 18616060 -148034236 + (TG)n Simple_repeat Simple_repeat 1 84 0 1 727 672 287 0 26 chrX 18616062 18616216 -148034080 - B3 SINE B2 -66 150 1 1 727 2016 199 4 113 chrX 18616399 18616903 -148033393 + RLTR25B LTR ERVK 1 449 -579 1 727 26 30 0 0 chrX 18617348 18617381 -148032915 + AT_rich Low_complexity Low_complexity 1 33 0 1 727 571 206 96 135 chrX 18617476 18617684 -148032612 + RLTR25B LTR ERVK 572 771 -257 1 727 288 273 66 8 chrX 18617670 18617792 -148032504 + RLTR25B LTR ERVK 975 1103 0 1 727 437 296 93 101 chrX 18618013 18618038 -148032258 + ORR1E LTR MaLR 11 33 -326 1 727 297 0 0 0 chrX 18618038 18618071 -148032225 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 727 437 296 93 101 chrX 18618071 18618282 -148032014 + ORR1E LTR MaLR 34 244 -115 1 727 225 305 60 12 chrX 18618361 18618444 -148031852 + ORR1E LTR MaLR 286 372 -7 1 727 1035 216 0 5 chrX 18618506 18618706 -148031590 + ORR1C1 LTR MaLR 180 378 0 1 727 4498 248 39 44 chrX 18618706 18619770 -148030526 + ORR1C1-int LTR MaLR 1 1080 -290 1 727 234 0 0 0 chrX 18619770 18619796 -148030500 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 1 727 4498 248 39 44 chrX 18619796 18620108 -148030188 + ORR1C1-int LTR MaLR 1081 1370 0 1 727 1780 182 88 6 chrX 18620108 18620403 -148029893 + ORR1C1 LTR MaLR 1 312 -66 1 727 444 77 0 0 chrX 18620403 18620468 -148029828 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 727 1780 182 88 6 chrX 18620468 18620514 -148029782 + ORR1C1 LTR MaLR 313 369 -9 1 727 321 169 0 0 chrX 18621227 18621286 -148029010 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 727 205 98 49 0 chrX 18622954 18622995 -148027301 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 727 212 231 25 33 chrX 18623015 18623136 -148027160 + (TTATA)n Simple_repeat Simple_repeat 5 124 0 1 727 21 0 0 0 chrX 18623160 18623181 -148027115 + AT_rich Low_complexity Low_complexity 1 21 0 1 727 861 328 60 21 chrX 18623193 18623573 -148026723 + MLT1D LTR MaLR 41 435 -70 1 727 1266 364 115 74 chrX 18623837 18625001 -148025295 + FordPrefect DNA Tip100 471 1682 -1 1 727 1646 21 5 0 chrX 18625047 18625239 -148025057 - B2_Mm1a SINE B2 0 193 1 1 727 187 346 37 37 chrX 18625239 18625347 -148024949 - MIRb SINE MIR -111 157 50 1 727 284 292 150 40 chrX 18625355 18625455 -148024841 - B1F SINE Alu -1 119 9 1 727 430 359 20 0 chrX 18625687 18625882 -148024414 - L1M3 LINE L1 -3431 2709 2511 1 727 273 210 0 0 chrX 18626893 18626955 -148023341 + GA-rich Low_complexity Low_complexity 3 64 0 1 727 901 204 145 9 chrX 18628395 18628622 -148021674 - Lx3C LINE L1 0 6976 6719 1 727 462 334 53 24 chrX 18628930 18629170 -148021126 - ORR1E LTR MaLR -125 269 9 1 727 1962 339 49 34 chrX 18629152 18630493 -148019803 - ORR1E-int LTR MaLR -27 1553 141 1 727 528 59 0 0 chrX 18630925 18630993 -148019303 + (TTTC)n Simple_repeat Simple_repeat 2 69 0 1 727 2473 259 62 21 chrX 18631295 18631453 -148018843 + L1_Rod LINE L1 602 763 -6845 1 727 2190 179 15 15 chrX 18631453 18631860 -148018436 + MTB_Mm LTR MaLR 1 407 0 1 727 4217 219 42 25 chrX 18631860 18633316 -148016980 + L1_Rod LINE L1 764 2241 -3606 1 727 2087 232 43 19 chrX 18633317 18633852 -148016444 + L1VL4 LINE L1 216 763 -5539 1 727 11575 142 13 80 chrX 18633837 18636689 -148013607 + L1_Mur3 LINE L1 1233 3471 -2409 1 727 274 0 73 0 chrX 18636689 18636730 -148013566 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 1 727 9111 218 18 173 chrX 18636730 18637708 -148012588 + L1_Mur3 LINE L1 3472 4468 -1412 1 727 1993 132 60 36 chrX 18637709 18638094 -148012202 + RMER17A2 LTR ERVK 1 394 -512 1 727 668 197 23 0 chrX 18638094 18638226 -148012070 + Lx2 LINE L1 5925 6059 -938 1 727 21 36 0 0 chrX 18638563 18638591 -148011705 + AT_rich Low_complexity Low_complexity 1 28 0 2 727 2211 11 114 0 chrX 18638780 18639042 -148011254 + RLTR10B LTR ERVK 1 292 0 2 727 535 138 0 0 chrX 18639045 18639132 -148011164 + ORR1A2 LTR MaLR 1 87 -240 2 727 4651 141 37 5 chrX 18639114 18639889 -148010407 + ORR1A2-int LTR MaLR 1041 1840 -123 2 727 9568 12 0 28 chrX 18639889 18641381 -148008915 - L1Md_A LINE L1 -3538 2345 896 2 727 7815 17 1 0 chrX 18641383 18642284 -148008012 + L1Md_A LINE L1 4685 5586 -297 2 727 8807 14 0 0 chrX 18642284 18643279 -148007017 + L1Md_A LINE L1 5587 6581 -1 2 727 830 85 69 196 chrX 18643279 18643483 -148006813 + ORR1A2-int LTR MaLR 1786 1963 0 2 727 1638 135 34 0 chrX 18643483 18643750 -148006546 + ORR1A2 LTR MaLR 1 276 -51 2 727 9328 207 84 43 chrX 18643750 18646612 -148003684 + Lx9 LINE L1 2232 5210 -637 2 727 198 0 0 0 chrX 18646615 18646637 -148003659 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 727 849 176 322 29 chrX 18646642 18647061 -148003235 + Lx9 LINE L1 5431 5973 -1671 2 727 503 18 0 0 chrX 18647063 18647119 -148003177 - L1_Mus1 LINE L1 -131 6436 6381 2 727 1121 76 0 7 chrX 18648408 18648554 -148001742 + B1_Mm SINE Alu 3 147 0 2 727 757 261 90 74 chrX 18649013 18649513 -148000783 - Charlie1a DNA MER1_type -16 1439 932 2 727 2023 256 36 32 chrX 18649770 18650360 -147999936 - Charlie1a DNA MER1_type -502 953 362 2 727 486 216 0 11 chrX 18650876 18650965 -147999331 + B1_Mur1 SINE Alu 56 143 -6 2 727 881 127 6 0 chrX 18650969 18651126 -147999170 + (GGGA)n Simple_repeat Simple_repeat 2 159 0 2 727 356 253 10 59 chrX 18651636 18651737 -147998559 + B4A SINE B4 197 292 0 2 727 633 286 18 6 chrX 18652746 18652915 -147997381 + MER5A DNA MER1_type 16 186 -3 2 727 414 0 0 0 chrX 18653066 18653112 -147997184 + (TAGA)n Simple_repeat Simple_repeat 2 47 0 2 727 344 320 0 19 chrX 18653534 18653639 -147996657 - L2a LINE L2 -1 3425 3323 2 727 514 296 79 8 chrX 18653644 18653770 -147996526 + B1_Mur1 SINE Alu 6 140 -9 2 727 368 40 20 0 chrX 18653771 18653821 -147996475 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 727 851 283 110 68 chrX 18653906 18654225 -147996071 + L1MC3 LINE L1 7159 7507 -278 2 727 709 244 0 0 chrX 18654225 18654360 -147995936 + B1_Mur1 SINE Alu 2 136 -13 2 727 851 283 110 68 chrX 18654360 18654568 -147995728 + L1MC3 LINE L1 7508 7708 -77 2 727 216 167 0 0 chrX 18655496 18655532 -147994764 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 727 350 225 65 33 chrX 18655916 18656008 -147994288 - ORR1E LTR MaLR -2 377 283 2 727 1299 228 91 77 chrX 18656009 18656193 -147994103 + MTE2b LTR MaLR 1 175 -204 2 727 390 21 0 0 chrX 18656193 18656240 -147994056 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 727 600 77 0 0 chrX 18656240 18656330 -147993966 + (GA)n Simple_repeat Simple_repeat 2 92 0 2 727 1299 228 91 77 chrX 18656330 18656506 -147993790 + MTE2b LTR MaLR 176 366 -13 2 727 624 271 47 21 chrX 18656556 18656748 -147993548 - ORR1E LTR MaLR -162 197 1 2 727 213 132 0 0 chrX 18657488 18657526 -147992770 + (T)n Simple_repeat Simple_repeat 1 38 0 2 727 761 135 47 7 chrX 18657621 18657770 -147992526 - Lx LINE L1 0 6654 6500 2 727 406 184 26 0 chrX 18657772 18657850 -147992446 + L1_Mus4 LINE L1 6403 6474 -162 2 727 308 337 11 21 chrX 18658245 18658339 -147991957 + ID_B1 SINE B4 117 209 -15 2 727 1262 33 0 32 chrX 18658341 18658589 -147991707 + (GGGAGA)n Simple_repeat Simple_repeat 1 239 0 2 727 3393 96 18 8 chrX 18658809 18659302 -147990994 + Lx3A LINE L1 6472 6969 -12 2 727 198 0 0 0 chrX 18659302 18659324 -147990972 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2 727 428 230 40 0 chrX 18659340 18659440 -147990856 - RMER1C Other Other -379 963 860 2 727 1392 192 120 80 chrX 18659441 18659815 -147990481 + RMER1C Other Other 943 1331 -11 2 727 685 301 4 110 chrX 18659835 18660089 -147990207 + B4 SINE B4 2 228 -64 2 727 1700 255 64 13 chrX 18660083 18660476 -147989820 - MTD LTR MaLR -6 413 1 2 727 1356 67 0 0 chrX 18660529 18660709 -147989587 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 2 727 726 212 201 0 chrX 18661425 18661604 -147988692 - B3 SINE B2 0 216 2 2 727 186 344 83 0 chrX 18662451 18662547 -147987749 - L2 LINE L2 -411 3008 2905 2 727 443 311 44 15 chrX 18662732 18662869 -147987427 + B1F SINE Alu 1 141 -8 2 727 282 116 0 0 chrX 18662870 18662913 -147987383 + (GGA)n Simple_repeat Simple_repeat 2 44 0 2 727 222 118 0 0 chrX 18662911 18662945 -147987351 + (TGG)n Simple_repeat Simple_repeat 2 35 0 2 727 1177 320 35 6 chrX 18663392 18663882 -147986414 + MLT1D LTR MaLR 2 505 0 2 727 1103 69 7 0 chrX 18663956 18664101 -147986195 + B1_Mus1 SINE Alu 3 148 0 2 727 929 144 187 0 chrX 18664730 18664917 -147985379 + URR1B DNA MER1_type 2 223 -2 2 727 2097 108 7 0 chrX 18665985 18666291 -147984005 - L1_Mus3 LINE L1 0 6638 6331 2 727 8172 90 20 30 chrX 18666291 18667627 -147982669 - L1VL1 LINE L1 -1424 2274 944 2 727 297 0 0 0 chrX 18667627 18667660 -147982636 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 727 3848 161 47 41 chrX 18667660 18668415 -147981881 - L1VL1 LINE L1 -5479 943 192 2 727 229 152 43 0 chrX 18669334 18669380 -147980916 + B1_Mur3 SINE Alu 82 129 -20 2 727 450 49 0 0 chrX 18669388 18669449 -147980847 + (GA)n Simple_repeat Simple_repeat 2 62 0 2 727 369 270 32 0 chrX 18669568 18669694 -147980602 + L1MB3 LINE L1 5787 5916 -267 2 727 392 287 40 16 chrX 18670090 18670214 -147980082 + MLT1A0 LTR MaLR 21 147 -218 2 727 387 0 0 0 chrX 18670215 18670258 -147980038 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 727 247 294 0 0 chrX 18670266 18670351 -147979945 + CT-rich Low_complexity Low_complexity 2 86 0 2 727 326 308 164 45 chrX 18670353 18670530 -147979766 + MLT1A0 LTR MaLR 173 370 -4 2 727 242 274 24 12 chrX 18670622 18670707 -147979589 + MIRb SINE MIR 125 210 -58 2 727 769 264 13 43 chrX 18670845 18671075 -147979221 + ID_B1 SINE B4 2 224 0 2 727 1126 66 0 0 chrX 18671107 18671244 -147979052 + B1_Mus1 SINE Alu 1 137 -11 2 727 324 48 0 0 chrX 18671244 18671286 -147979010 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 2 727 280 363 80 0 chrX 18671286 18671399 -147978897 + B1_Mus1 SINE Alu 4 125 -23 2 727 687 247 7 7 chrX 18672077 18672224 -147978072 + B1F SINE Alu 3 149 0 2 727 566 272 62 5 chrX 18673250 18673442 -147976854 + B3 SINE B2 1 203 -13 2 727 724 211 50 101 chrX 18673586 18673726 -147976570 - MTD LTR MaLR 0 419 271 2 727 1401 84 30 5 chrX 18673726 18673929 -147976367 + L1_Mus3 LINE L1 6422 6629 -9 2 727 724 211 50 101 chrX 18673929 18673967 -147976329 - MTD LTR MaLR -149 270 250 2 727 939 293 46 31 chrX 18674137 18674553 -147975743 + L1VL4 LINE L1 199 620 -5682 2 727 11473 159 33 15 chrX 18674552 18676871 -147973425 + L1_Mm LINE L1 1706 4067 -1816 2 727 6038 70 1 34 chrX 18676866 18677745 -147972551 + L1_Mus2 LINE L1 5717 6566 0 2 727 8683 158 38 3 chrX 18677727 18679406 -147970890 + L1_Mm LINE L1 3560 5297 -586 2 727 1255 154 10 0 chrX 18679411 18679427 -147970869 - RLTR13D4 LTR ERVK -836 197 181 2 727 5300 66 4 0 chrX 18679427 18680109 -147970187 + L1Md_F2 LINE L1 5893 6577 -5 2 727 1255 154 10 0 chrX 18680109 18680287 -147970009 - RLTR13D4 LTR ERVK -853 180 2 2 727 287 78 4 0 chrX 18680287 18680344 -147969952 + L1_Mus1 LINE L1 6523 6582 0 2 727 279 0 0 0 chrX 18680390 18680421 -147969875 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 2 727 26 0 0 0 chrX 18680803 18680829 -147969467 + AT_rich Low_complexity Low_complexity 1 26 0 2 727 746 186 8 0 chrX 18680830 18680959 -147969337 - B1_Mur4 SINE Alu -9 141 12 2 727 688 147 7 59 chrX 18681016 18681168 -147969128 - Lx2B LINE L1 -2 6998 6855 2 727 2878 122 2 0 chrX 18681182 18681624 -147968672 - L1_Mm LINE L1 -97 5786 5344 2 727 2044 140 11 0 chrX 18681610 18681960 -147968336 - L1_Mm LINE L1 -40 5843 5490 2 727 1816 267 94 4 chrX 18682003 18682545 -147967751 - Lx8 LINE L1 -324 7149 6559 2 727 708 262 19 28 chrX 18682573 18682789 -147967507 - Lx8 LINE L1 -1088 6385 6172 2 727 6092 116 4 32 chrX 18682843 18683842 -147966454 - Lx LINE L1 -3 6651 5681 2 727 502 250 46 20 chrX 18683854 18684005 -147966291 + Lx6 LINE L1 7280 7434 -26 2 727 26 30 0 0 chrX 18684010 18684043 -147966253 + AT_rich Low_complexity Low_complexity 1 33 0 2 727 693 181 96 22 chrX 18684066 18684202 -147966094 + B1_Mur1 SINE Alu 2 147 -2 2 727 682 289 29 103 chrX 18684658 18685067 -147965229 + MTE2a LTR MaLR 1 379 0 2 727 315 0 0 0 chrX 18685357 18685392 -147964904 + (TC)n Simple_repeat Simple_repeat 2 36 0 2 727 303 28 0 0 chrX 18685392 18685427 -147964869 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 727 207 69 0 0 chrX 18685427 18685456 -147964840 + (GA)n Simple_repeat Simple_repeat 2 30 0 2 727 302 272 75 37 chrX 18685668 18685775 -147964521 + PB1D7 SINE Alu 10 120 0 2 727 528 314 111 21 chrX 18685893 18686271 -147964025 + HAL1 LINE L1 107 518 -1989 2 727 344 285 130 19 chrX 18686555 18686716 -147963580 + HAL1 LINE L1 875 1053 -1454 2 727 480 330 60 84 chrX 18686723 18687008 -147963288 + B4A SINE B4 15 292 0 2 727 216 313 0 15 chrX 18687011 18687066 -147963230 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 727 183 80 0 0 chrX 18687066 18687091 -147963205 + (CCA)n Simple_repeat Simple_repeat 1 25 0 2 727 216 313 0 15 chrX 18687091 18687103 -147963193 + (CA)n Simple_repeat Simple_repeat 1 12 0 2 727 628 312 35 17 chrX 18687705 18687878 -147962418 + B3A SINE B2 10 185 -13 2 727 348 297 96 29 chrX 18687889 18688097 -147962199 + HAL1 LINE L1 1566 1787 -720 2 727 501 47 0 0 chrX 18688721 18688785 -147961511 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 727 917 248 163 4 chrX 18688795 18689022 -147961274 + B4 SINE B4 12 274 -18 2 727 752 122 8 0 chrX 18689024 18689147 -147961149 + (CA)n Simple_repeat Simple_repeat 1 124 0 2 727 964 233 19 10 chrX 18691087 18691295 -147959001 - B3 SINE B2 -5 211 2 2 727 365 221 0 0 chrX 18691318 18691386 -147958910 + ORR1C1 LTR MaLR 232 299 -79 2 727 357 363 17 0 chrX 18691626 18691805 -147958491 + L1MD LINE L1 4687 4868 -1278 2 727 760 292 57 84 chrX 18691806 18692105 -147958191 + B4 SINE B4 2 292 0 2 727 1098 182 41 48 chrX 18692320 18692614 -147957682 + Lx9 LINE L1 7226 7517 -127 2 727 602 199 15 0 chrX 18692614 18692750 -147957546 + (TATG)n Simple_repeat Simple_repeat 3 140 0 2 727 959 162 7 0 chrX 18692753 18692907 -147957389 - ORR1C1 LTR MaLR -2 376 222 3 727 2930 217 99 88 chrX 18692907 18693849 -147956447 - RMER17B LTR ERVK 0 958 7 3 727 850 209 70 87 chrX 18693855 18694085 -147956211 - ORR1C1 LTR MaLR -151 227 2 3 727 528 153 36 7 chrX 18694085 18694223 -147956073 + Lx9 LINE L1 7497 7638 -6 2 727 4020 74 4 0 chrX 18694267 18694780 -147955516 + L1_Mus1 LINE L1 6053 6567 0 3 727 516 256 211 23 chrX 18694844 18695284 -147955012 + L1MA7 LINE L1 5769 6291 0 3 727 5975 87 16 7 chrX 18695345 18697051 -147953245 + L1VL2 LINE L1 105 1826 -1789 3 727 218 322 11 43 chrX 18697188 18697282 -147953014 - PB1D10 SINE Alu 0 117 27 3 727 24 85 0 0 chrX 18697971 18698030 -147952266 + AT_rich Low_complexity Low_complexity 1 59 0 3 727 22 70 0 0 chrX 18698143 18698186 -147952110 + AT_rich Low_complexity Low_complexity 1 43 0 3 727 239 230 95 0 chrX 18698241 18698315 -147951981 + PB1D7 SINE Alu 40 120 0 3 727 442 301 0 28 chrX 18698514 18698620 -147951676 - PB1D10 SINE Alu 0 117 15 3 727 393 339 97 0 chrX 18698540 18698664 -147951632 - ID_B1 SINE B4 -49 175 40 3 727 353 318 105 64 chrX 18698686 18698820 -147951476 + L1ME1 LINE L1 5290 5436 -728 3 727 583 282 33 24 chrX 18698820 18699031 -147951265 + B3 SINE B2 3 215 -1 3 727 668 313 103 42 chrX 18699031 18699758 -147950538 + L1ME1 LINE L1 5437 6179 0 3 727 364 242 24 8 chrX 18699750 18699875 -147950421 + L1M5 LINE L1 3836 3962 -2184 3 727 37547 28 3 7 chrX 18700259 18706254 -147944042 - L1Md_T LINE L1 0 6582 618 3 727 266 311 50 116 chrX 18706254 18706617 -147943679 - RMER17A LTR ERVK -84 667 329 3 727 353 331 140 17 chrX 18706671 18706963 -147943333 + L1M5 LINE L1 4565 4892 -1254 3 727 12095 133 23 5 chrX 18707070 18709846 -147940450 + L1Md_F LINE L1 395 3221 -2662 3 727 532 301 104 3 chrX 18710027 18710334 -147939962 + L1M5 LINE L1 5309 5646 -527 3 727 222 118 0 0 chrX 18710424 18710458 -147939838 + (GGA)n Simple_repeat Simple_repeat 3 36 0 3 727 1029 49 0 20 chrX 18710477 18710624 -147939672 + (GAA)n Simple_repeat Simple_repeat 1 144 0 3 727 301 211 77 26 chrX 18710657 18710735 -147939561 + ID4 SINE ID 1 82 -1 3 727 301 280 13 13 chrX 18710834 18710910 -147939386 - ID4_ SINE ID -2 81 6 3 727 21 0 0 0 chrX 18710935 18710956 -147939340 + AT_rich Low_complexity Low_complexity 1 21 0 3 727 834 328 72 18 chrX 18711024 18711364 -147938932 - Lx8 LINE L1 -1 7472 7111 3 727 5755 107 28 32 chrX 18711364 18712302 -147937994 - Lx2 LINE L1 0 6997 6064 3 727 834 328 72 18 chrX 18712302 18712513 -147937783 - Lx8 LINE L1 -363 7110 6891 3 727 479 308 12 70 chrX 18712504 18712710 -147937586 - Lx8 LINE L1 -706 6767 6575 3 727 3035 29 0 0 chrX 18712710 18713056 -147937240 - ORR1A0 LTR MaLR 0 346 1 3 727 479 308 12 70 chrX 18713056 18713093 -147937203 - Lx8 LINE L1 -899 6574 6538 3 727 675 297 0 0 chrX 18713133 18713288 -147937008 - ID_B1 SINE B4 -68 156 2 3 727 384 330 0 9 chrX 18713297 18713404 -147936892 - PB1D10 SINE Alu -7 110 5 3 727 252 363 61 15 chrX 18713628 18713824 -147936472 + L1M5 LINE L1 5619 5823 -371 3 727 2560 121 2 0 chrX 18713837 18714242 -147936054 - L1_Mm LINE L1 -876 5007 4602 3 727 1426 98 51 0 chrX 18714242 18714457 -147935839 + L1_Mus1 LINE L1 6342 6567 0 3 727 192 40 0 0 chrX 18714465 18714490 -147935806 + (TTAAA)n Simple_repeat Simple_repeat 3 27 0 3 727 289 221 50 35 chrX 18714510 18714651 -147935645 + L1ME5 LINE L1 5858 6000 -194 3 727 252 269 51 0 chrX 18714796 18714874 -147935422 + ID4_ SINE ID 2 83 0 3 727 574 251 129 14 chrX 18714916 18715223 -147935073 + L1MC4 LINE L1 7327 7670 -212 3 727 361 269 239 19 chrX 18715464 18715623 -147934673 - L1MB7 LINE L1 -84 6100 5907 3 727 245 224 0 17 chrX 18715708 18715767 -147934529 - ID_B1 SINE B4 0 224 167 3 727 342 0 0 0 chrX 18715884 18715922 -147934374 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 727 2855 80 9 35 chrX 18715935 18716364 -147933932 + BGLII LTR ERVK 4 421 0 3 727 767 242 10 41 chrX 18716754 18717047 -147933249 + RMER3D-int LTR ERVK 652 935 -1907 3 727 612 142 35 0 chrX 18717082 18717195 -147933101 + RMER3D-int LTR ERVK 489 605 -2237 3 727 439 132 19 0 chrX 18717201 18717287 -147933009 + RMER3D-int LTR ERVK 1014 1081 -1761 3 727 2411 38 37 3 chrX 18717287 18717608 -147932688 + L1_Mus3 LINE L1 5996 6327 -311 3 727 2663 84 12 58 chrX 18717608 18718023 -147932273 + MTA_Mm LTR MaLR 1 396 0 3 727 2652 34 3 0 chrX 18718031 18718355 -147931941 + ORR1A0 LTR MaLR 22 346 0 3 727 724 35 0 0 chrX 18718355 18718441 -147931855 + MTA_Mm LTR MaLR 311 396 0 3 727 2039 100 16 10 chrX 18718441 18718755 -147931541 + L1_Mus3 LINE L1 6323 6638 0 3 727 2110 195 11 70 chrX 18718771 18719329 -147930967 + RMER3D-int LTR ERVK 1155 1679 -1163 3 727 2818 201 60 47 chrX 18719347 18720254 -147930042 + RMER3D-int LTR ERVK 1925 2842 0 3 727 2602 79 54 32 chrX 18720254 18720659 -147929637 + BGLII LTR ERVK 1 414 -7 3 727 359 349 147 12 chrX 18720907 18721159 -147929137 - MER21B LTR ERV1 -202 661 376 3 727 356 273 113 32 chrX 18721586 18721759 -147928537 + MLT1A1 LTR MaLR 160 406 -2 3 727 300 367 24 42 chrX 18721879 18722044 -147928252 - MER21B LTR ERV1 -661 202 41 3 727 2523 63 3 23 chrX 18724297 18724640 -147925656 - L1_Mus2 LINE L1 -3 6563 6228 3 727 5406 204 72 32 chrX 18725840 18726203 -147924093 + Lx6 LINE L1 5960 6349 -1111 3 727 1686 87 35 23 chrX 18726203 18726461 -147923835 + L1Md_F2 LINE L1 6322 6582 0 3 727 5406 204 72 32 chrX 18726461 18727289 -147923007 + Lx6 LINE L1 6350 7198 -262 3 727 360 193 47 102 chrX 18727525 18727652 -147922644 + L1MA10 LINE L1 6210 6329 -5 3 727 411 21 0 0 chrX 18727652 18727700 -147922596 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 727 605 324 39 35 chrX 18730141 18730423 -147919873 + B4 SINE B4 2 284 -8 3 727 218 214 143 0 chrX 18731074 18731130 -147919166 + ID4_ SINE ID 8 71 -12 3 727 217 261 84 29 chrX 18732596 18732681 -147917615 - MIRc SINE MIR -70 198 107 3 727 1282 238 125 13 chrX 18733635 18734108 -147916188 - L1M5 LINE L1 -366 5813 5288 3 727 25 0 0 0 chrX 18734458 18734483 -147915813 + AT_rich Low_complexity Low_complexity 1 25 0 3 727 405 0 0 0 chrX 18736101 18736146 -147914150 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 727 270 0 0 0 chrX 18736146 18736175 -147914121 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 727 331 393 56 33 chrX 18737862 18738075 -147912221 + MIR SINE MIR 40 257 -5 3 727 21 0 0 0 chrX 18738523 18738544 -147911752 + AT_rich Low_complexity Low_complexity 1 21 0 3 727 298 277 217 7 chrX 18740320 18740458 -147909838 + MIR SINE MIR 45 211 -51 3 727 474 18 0 0 chrX 18740652 18740707 -147909589 + (CATA)n Simple_repeat Simple_repeat 2 56 0 3 727 452 335 97 5 chrX 18740707 18740891 -147909405 - MER46C DNA MER2_type -110 228 27 3 727 441 36 0 0 chrX 18741891 18741946 -147908350 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 728 489 17 0 0 chrX 18745152 18745210 -147905086 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 728 249 57 0 0 chrX 18746230 18746265 -147904031 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 728 23 0 0 0 chrX 18746536 18746559 -147903737 + AT_rich Low_complexity Low_complexity 1 23 0 3 728 207 0 0 0 chrX 18747376 18747399 -147902897 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 728 180 0 0 0 chrX 18747407 18747427 -147902869 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 728 594 0 0 0 chrX 18747634 18747700 -147902596 + (TTTTG)n Simple_repeat Simple_repeat 2 67 0 3 728 269 321 61 52 chrX 18748609 18748724 -147901572 + PB1D10 SINE Alu 2 117 0 3 728 300 154 0 0 chrX 18749125 18749177 -147901119 + GA-rich Low_complexity Low_complexity 2 53 0 3 728 244 214 118 0 chrX 18749906 18749983 -147900313 + PB1D9 SINE Alu 19 110 -10 3 728 319 242 0 0 chrX 18750084 18750150 -147900146 - ID4 SINE ID -4 79 14 3 728 723 268 83 43 chrX 18750745 18751022 -147899274 + B4 SINE B4 5 292 0 3 728 1437 272 160 27 chrX 18751633 18752264 -147898032 + Lx9 LINE L1 6751 7465 -179 3 728 458 266 241 64 chrX 18752696 18752945 -147897351 + MTEa LTR MaLR 5 297 -82 3 728 257 294 18 27 chrX 18753532 18753644 -147896652 - Kanga1c DNA Tc2 -4 725 615 3 728 287 368 122 58 chrX 18753800 18754178 -147896118 - Kanga1c DNA Tc2 -327 402 4 3 728 2138 168 42 17 chrX 18754945 18755352 -147894944 + MTC LTR MaLR 1 417 -4 3 728 482 202 30 5 chrX 18758001 18758123 -147892173 - B1_Mur4 SINE Alu -17 132 1 3 728 593 266 28 7 chrX 18758384 18758528 -147891768 - B1F SINE Alu 0 149 3 3 728 462 18 0 0 chrX 18759654 18759709 -147890587 + (TTTTG)n Simple_repeat Simple_repeat 2 56 0 3 728 701 256 14 58 chrX 18759836 18760043 -147890253 + B3A SINE B2 1 198 0 3 728 318 270 34 51 chrX 18762188 18762305 -147887991 + PB1D10 SINE Alu 3 117 0 3 728 501 17 0 0 chrX 18762385 18762443 -147887853 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 728 297 0 0 0 chrX 18762443 18762475 -147887821 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 728 433 284 76 41 chrX 18762686 18763145 -147887151 + L1MEf LINE L1 611 1113 -5527 3 728 441 329 65 56 chrX 18763237 18763559 -147886737 + L1MEf LINE L1 1414 1738 -4902 3 728 213 39 0 0 chrX 18763690 18763716 -147886580 + (T)n Simple_repeat Simple_repeat 1 26 0 3 728 1443 51 0 0 chrX 18763720 18763898 -147886398 - ORR1A1 LTR MaLR -57 289 112 3 728 38105 29 0 0 chrX 18763898 18770362 -147879934 - L1Md_T LINE L1 0 6585 80 3 728 292 150 0 16 chrX 18770362 18770422 -147879874 - ORR1A1 LTR MaLR -209 137 82 3 728 505 268 142 4 chrX 18770443 18770731 -147879565 + L1MEf LINE L1 3109 3438 -3106 3 728 255 250 119 0 chrX 18770747 18770831 -147879465 + L1MEf LINE L1 3670 3763 -2781 3 728 280 244 206 30 chrX 18770861 18771026 -147879270 - L1M5 LINE L1 -2421 3725 3532 3 728 258 271 29 0 chrX 18771386 18771456 -147878840 + MTEb LTR MaLR 300 371 -8 3 728 335 373 25 6 chrX 18772159 18772321 -147877975 - MIR3 SINE MIR -23 185 21 3 728 4941 56 2 13 chrX 18772898 18773533 -147876763 + L1Md_F2 LINE L1 5943 6570 -12 3 728 248 260 134 31 chrX 18773925 18774052 -147876244 + B1_Mus2 SINE Alu 7 146 -1 3 728 1225 34 0 0 chrX 18775026 18775173 -147875123 - B1_Mm SINE Alu 0 147 1 3 728 330 278 11 32 chrX 18776604 18776697 -147873599 + MTEb LTR MaLR 12 102 -277 3 728 1088 174 71 5 chrX 18777492 18777689 -147872607 + B3 SINE B2 2 211 -5 3 728 22 0 0 0 chrX 18777690 18777712 -147872584 + AT_rich Low_complexity Low_complexity 1 22 0 3 728 431 231 70 8 chrX 18778175 18778362 -147871934 + L1MC4a LINE L1 7576 7878 -117 3 728 369 318 35 26 chrX 18778522 18778635 -147871661 + B1F SINE Alu 19 132 -17 4 728 216 0 0 0 chrX 18778638 18778662 -147871634 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 728 579 304 31 57 chrX 18779346 18779538 -147870758 + B3 SINE B2 23 209 -7 4 728 253 293 120 0 chrX 18779557 18779632 -147870664 + ID_B1 SINE B4 80 163 -61 4 728 252 261 76 0 chrX 18781172 18781264 -147869032 + L1ME2z LINE L1 6302 6400 -44 4 728 6042 98 27 8 chrX 18781330 18782221 -147868075 + Lx3A LINE L1 6071 6978 -3 4 728 300 299 101 22 chrX 18782265 18782354 -147867942 + MT2B LTR ERVL 162 257 -344 4 728 517 175 28 37 chrX 18782285 18782392 -147867904 + B1_Mus1 SINE Alu 34 139 -9 4 728 504 0 0 0 chrX 18782394 18782450 -147867846 + (GGAA)n Simple_repeat Simple_repeat 2 57 0 4 728 383 309 18 0 chrX 18782515 18782625 -147867671 + PB1D10 SINE Alu 1 112 -5 4 728 392 315 11 0 chrX 18782663 18782755 -147867541 + PB1D7 SINE Alu 17 109 -11 4 728 228 45 21 62 chrX 18783954 18784002 -147866294 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 4 728 1163 62 0 20 chrX 18784008 18784157 -147866139 - B1_Mus1 SINE Alu -2 146 1 4 728 198 71 0 0 chrX 18784283 18784311 -147865985 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 4 728 606 229 85 5 chrX 18784383 18784572 -147865724 + L1MB1 LINE L1 5796 5999 -190 4 728 189 74 0 0 chrX 18784750 18784777 -147865519 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 728 231 238 34 39 chrX 18786975 18787154 -147863142 + (TGAG)n Simple_repeat Simple_repeat 2 179 0 4 728 207 122 24 24 chrX 18787272 18787314 -147862982 + GA-rich Low_complexity Low_complexity 1 42 0 4 728 232 271 127 14 chrX 18787584 18787655 -147862641 + ID4_ SINE ID 2 80 -3 4 728 747 286 51 5 chrX 18787871 18788085 -147862211 + ID_B1 SINE B4 1 224 0 4 728 218 373 0 15 chrX 18789420 18789488 -147860808 + ID4_ SINE ID 15 81 -2 4 728 20649 168 7 47 chrX 18789588 18793869 -147856427 + L1_Mus2 LINE L1 388 4603 -1283 4 728 1288 56 0 0 chrX 18793869 18794029 -147856267 + B2_Mm1t SINE B2 1 160 -33 4 728 198 0 0 0 chrX 18794029 18794051 -147856245 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 4 728 20649 149 6 35 chrX 18794051 18795569 -147854727 + L1_Mus2 LINE L1 4604 6101 -465 4 728 1823 79 0 4 chrX 18795572 18795826 -147854470 - L1_Mus2 LINE L1 -43 6523 6271 4 728 1119 36 0 0 chrX 18795860 18795998 -147854298 - B1_Mus1 SINE Alu 0 148 11 4 728 495 82 0 0 chrX 18796006 18796079 -147854217 + (TG)n Simple_repeat Simple_repeat 1 73 0 4 728 745 222 0 0 chrX 18796094 18796229 -147854067 - B4A SINE B4 -36 256 122 4 728 240 270 39 39 chrX 18796324 18796401 -147853895 + ID4 SINE ID 5 81 -2 4 728 429 261 40 48 chrX 18796728 18796853 -147853443 + PB1 SINE Alu 2 125 -2 4 728 707 310 59 15 chrX 18796935 18797138 -147853158 - B4A SINE B4 -16 276 65 4 728 535 308 38 6 chrX 18797212 18797369 -147852927 - RSINE1 SINE B4 -1 164 3 4 728 425 262 39 0 chrX 18797378 18797481 -147852815 - PB1D10 SINE Alu -6 111 5 4 728 213 217 138 46 chrX 18798059 18798146 -147852150 + MIRb SINE MIR 75 169 -99 4 728 247 253 61 37 chrX 18798533 18798615 -147851681 + PB1D10 SINE Alu 34 117 0 4 728 504 0 0 0 chrX 18798870 18798926 -147851370 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 728 184 322 9 186 chrX 18799033 18799184 -147851112 - MIRc SINE MIR -32 236 111 4 728 807 227 64 20 chrX 18799184 18799386 -147850910 + B3 SINE B2 1 211 -5 4 728 184 322 9 186 chrX 18799386 18799455 -147850841 - MIRc SINE MIR -158 110 55 4 728 277 292 42 0 chrX 18800123 18800195 -147850101 + PB1D9 SINE Alu 38 112 -8 4 728 417 250 285 47 chrX 18800928 18801100 -147849196 + B4 SINE B4 1 213 -79 4 728 1649 229 96 17 chrX 18801128 18801546 -147848750 + Lx6 LINE L1 6954 7404 -56 4 728 270 240 78 26 chrX 18801908 18801985 -147848311 - B4A SINE B4 -206 86 6 4 728 255 61 0 0 chrX 18802910 18802943 -147847353 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 728 596 278 43 28 chrX 18803491 18803702 -147846594 + ID_B1 SINE B4 3 216 -8 4 728 280 247 162 20 chrX 18803736 18803835 -147846461 - PB1D10 SINE Alu 0 117 5 4 728 459 313 0 0 chrX 18804098 18804213 -147846083 - PB1D10 SINE Alu 0 117 3 4 728 527 299 23 17 chrX 18804213 18804294 -147846002 - ID SINE ID -141 83 2 4 728 230 278 97 102 chrX 18805260 18805456 -147844840 + MLT1H LTR MaLR 349 543 -6 4 728 393 277 46 42 chrX 18805654 18805777 -147844519 + PB1D10 SINE Alu 6 141 -8 4 728 754 137 56 28 chrX 18806560 18806703 -147843593 + B1_Mur4 SINE Alu 3 149 -1 4 728 352 312 0 0 chrX 18806731 18806808 -147843488 - PB1D10 SINE Alu -14 103 27 4 728 375 320 0 29 chrX 18807175 18807278 -147843018 - PB1D7 SINE Alu 0 120 21 4 728 23 0 0 0 chrX 18807535 18807558 -147842738 + AT_rich Low_complexity Low_complexity 1 23 0 4 728 22 0 0 0 chrX 18808173 18808195 -147842101 + AT_rich Low_complexity Low_complexity 1 22 0 4 728 320 213 91 126 chrX 18808197 18808358 -147841938 + L1M5 LINE L1 5069 5230 -916 4 728 377 259 26 43 chrX 18808358 18808475 -147841821 - PB1D10 SINE Alu 0 117 3 4 728 320 213 91 126 chrX 18808475 18808512 -147841784 + L1M5 LINE L1 5231 5260 -886 4 728 456 302 0 40 chrX 18808565 18808689 -147841607 + B1F SINE Alu 1 119 -30 4 728 188 34 0 33 chrX 18808696 18808726 -147841570 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 728 694 286 125 62 chrX 18808728 18809519 -147840777 + L1MB2 LINE L1 5324 6164 -7 4 728 439 298 69 0 chrX 18809709 18809927 -147840369 + L1M5 LINE L1 5513 5745 -428 4 728 519 153 243 0 chrX 18810607 18810718 -147839578 - B1_Mur3 SINE Alu -10 139 2 4 728 270 106 0 0 chrX 18810723 18810770 -147839526 + (TTTTG)n Simple_repeat Simple_repeat 1 47 0 4 728 226 229 0 0 chrX 18810800 18810848 -147839448 + MurSatRep1 Unknown Unknown 227 274 -1863 4 728 267 254 41 27 chrX 18810966 18811039 -147839257 + ID4 SINE ID 3 76 -7 4 728 273 29 0 0 chrX 18811056 18811090 -147839206 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 728 333 17 32 63 chrX 18811090 18811153 -147839143 + (CAGAGA)n Simple_repeat Simple_repeat 2 62 0 4 728 180 111 0 0 chrX 18811829 18811856 -147838440 + (A)n Simple_repeat Simple_repeat 1 27 0 4 728 358 224 207 0 chrX 18812137 18812184 -147838112 + ID SINE ID 15 85 -139 4 728 215 309 74 11 chrX 18812184 18812279 -147838017 + PB1D10 SINE Alu 1 101 -16 4 728 387 0 0 0 chrX 18813025 18813068 -147837228 + (GA)n Simple_repeat Simple_repeat 1 43 0 4 728 255 301 115 10 chrX 18813068 18813172 -147837124 + B1F SINE Alu 35 149 0 4 728 240 246 0 0 chrX 18813211 18813280 -147837016 + GA-rich Low_complexity Low_complexity 3 71 0 4 728 495 0 0 0 chrX 18814028 18814083 -147836213 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 728 24 0 0 0 chrX 18815055 18815079 -147835217 + GC_rich Low_complexity Low_complexity 1 24 0 4 728 294 50 0 0 chrX 18815593 18815633 -147834663 + (TC)n Simple_repeat Simple_repeat 2 41 0 4 728 273 119 0 0 chrX 18815633 18815674 -147834622 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 728 219 250 16 0 chrX 18816371 18816435 -147833861 - PB1D10 SINE Alu -5 112 48 4 728 180 0 0 0 chrX 18816453 18816473 -147833823 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 728 24 32 0 0 chrX 18816926 18816957 -147833339 + AT_rich Low_complexity Low_complexity 1 31 0 4 728 1227 35 14 0 chrX 18818252 18818397 -147831899 + B1_Mus1 SINE Alu 2 148 0 4 728 1572 266 8 26 chrX 18818404 18818898 -147831398 + Lx9 LINE L1 6772 7256 -388 4 728 225 0 0 0 chrX 18818905 18818930 -147831366 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 4 728 369 0 0 0 chrX 18818970 18819011 -147831285 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 728 674 213 0 28 chrX 18819095 18819254 -147831042 - B1_Mur4 SINE Alu 0 150 1 4 728 21 36 0 0 chrX 18819417 18819445 -147830851 + AT_rich Low_complexity Low_complexity 1 28 0 4 728 207 195 24 0 chrX 18819488 18819529 -147830767 + CT-rich Low_complexity Low_complexity 4 45 0 4 728 600 111 0 0 chrX 18819669 18819759 -147830537 + (GGAA)n Simple_repeat Simple_repeat 3 92 0 4 728 544 261 60 121 chrX 18819992 18820240 -147830056 + RMER15 LTR ERVL 339 571 -4 4 728 836 314 85 51 chrX 18820381 18820791 -147829505 + MLT1C LTR MaLR 10 433 -34 4 728 637 352 22 35 chrX 18820917 18821144 -147829152 + B4A SINE B4 5 228 -64 4 728 280 314 32 32 chrX 18821250 18821375 -147828921 + B4A SINE B4 168 292 0 4 728 497 326 126 38 chrX 18822067 18822294 -147828002 - MLT1A1 LTR MaLR 0 408 149 4 728 605 274 53 24 chrX 18822294 18822503 -147827793 - ID_B1 SINE B4 -9 215 1 4 728 497 326 126 38 chrX 18822503 18822648 -147827648 - MLT1A1 LTR MaLR -260 148 3 4 728 1237 67 0 16 chrX 18822677 18822860 -147827436 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 728 405 345 20 33 chrX 18823775 18823925 -147826371 - ID_B1 SINE B4 -4 220 73 4 728 1440 237 50 30 chrX 18824180 18824541 -147825755 - ORR1D2 LTR MaLR -2 368 1 4 728 2860 84 8 2 chrX 18824546 18824940 -147825356 + MTA_Mm LTR MaLR 1 396 0 4 728 497 339 52 0 chrX 18824973 18825165 -147825131 + L2a LINE L2 3216 3417 -9 4 728 702 0 0 0 chrX 18825546 18825624 -147824672 + (TTC)n Simple_repeat Simple_repeat 1 78 0 4 728 278 177 242 0 chrX 18825660 18825722 -147824574 + B1F1 SINE Alu 35 111 -38 4 728 251 219 80 27 chrX 18825678 18825753 -147824543 + ID_B1 SINE B4 145 223 -1 4 728 263 357 140 21 chrX 18825738 18825753 -147824543 + B4 SINE B4 73 123 -169 5 728 363 242 60 50 chrX 18825753 18825853 -147824443 + B1_Mur4 SINE Alu 10 110 -39 5 728 263 357 140 21 chrX 18825853 18825881 -147824415 + B4 SINE B4 124 232 -60 5 728 284 130 0 36 chrX 18825881 18825937 -147824359 + GA-rich Low_complexity Low_complexity 3 56 0 5 728 253 77 38 19 chrX 18825992 18826045 -147824251 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 5 728 1607 149 3 78 chrX 18826053 18826374 -147823922 - Lx LINE L1 -16 6638 6342 5 728 555 262 56 14 chrX 18826404 18826547 -147823749 - MER45A DNA Tip100 -29 149 1 5 728 853 122 250 22 chrX 18827687 18827871 -147822425 - URR1A DNA MER1_type 0 226 1 5 728 412 284 93 36 chrX 18828161 18828300 -147821996 + ORR1E LTR MaLR 18 164 -195 5 728 304 285 40 139 chrX 18828316 18828467 -147821829 + ORR1E LTR MaLR 231 366 -13 5 728 1504 166 153 41 chrX 18828851 18829191 -147821105 + ORR1C1 LTR MaLR 1 378 0 5 728 657 374 103 25 chrX 18829393 18829868 -147820428 - LTR33 LTR ERVL -2 513 2 5 728 295 343 28 0 chrX 18830106 18830214 -147820082 - RMER15 LTR ERVL -57 518 408 5 728 553 278 32 24 chrX 18831760 18831932 -147818364 + B3A SINE B2 1 170 -46 5 728 483 18 0 0 chrX 18831936 18831992 -147818304 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 728 372 43 0 0 chrX 18832001 18832047 -147818249 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 728 3068 56 2 18 chrX 18832266 18832665 -147817631 - L1_Mus1 LINE L1 0 6567 6175 5 728 1165 73 12 0 chrX 18832665 18832821 -147817475 + L1_Mus1 LINE L1 5994 6149 -418 5 728 222 311 0 0 chrX 18832821 18832866 -147817430 + PB1D7 SINE Alu 13 57 -63 5 728 307 306 191 0 chrX 18833038 18833195 -147817101 + MLT1D LTR MaLR 27 213 -292 5 728 7333 75 9 1 chrX 18833195 18834521 -147815775 + L1_Mus1 LINE L1 5223 6566 -1 5 728 183 80 0 0 chrX 18834534 18834559 -147815737 + (A)n Simple_repeat Simple_repeat 1 25 0 5 728 219 241 0 18 chrX 18835506 18835561 -147814735 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 728 315 0 0 0 chrX 18835563 18835598 -147814698 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 728 21 57 0 0 chrX 18835663 18835698 -147814598 + AT_rich Low_complexity Low_complexity 1 35 0 5 728 1317 138 32 14 chrX 18836083 18836303 -147813993 + URR1B DNA MER1_type 2 225 0 5 728 285 252 86 109 chrX 18836328 18836502 -147813794 - L1MC4 LINE L1 -85 7957 7788 5 728 180 0 0 0 chrX 18837428 18837448 -147812848 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 728 201 74 0 0 chrX 18837449 18837476 -147812820 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 728 500 45 0 15 chrX 18837493 18837561 -147812735 + (AGGGGG)n Simple_repeat Simple_repeat 6 72 0 5 728 1353 39 0 16 chrX 18837563 18837746 -147812550 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 5 728 292 196 0 0 chrX 18837756 18837815 -147812481 - B1F SINE Alu -14 106 48 5 728 237 190 16 49 chrX 18837765 18837826 -147812470 - ID_B1 SINE B4 -49 175 117 5 728 234 348 12 24 chrX 18837878 18838044 -147812252 - L1M4 LINE L1 -2027 4119 3950 5 728 509 189 76 0 chrX 18838539 18838671 -147811625 + Lx4A LINE L1 6917 7058 0 5 728 296 296 176 52 chrX 18838706 18838736 -147811560 + B4 SINE B4 72 243 -49 5 728 525 271 1 6 chrX 18838736 18838859 -147811437 + PB1D10 SINE Alu 9 127 -21 5 728 460 325 40 32 chrX 18839488 18839612 -147810684 - B3A SINE B2 -30 168 44 5 728 845 330 133 58 chrX 18839931 18840381 -147809915 + MLT1G LTR MaLR 72 555 0 5 728 399 349 91 16 chrX 18840643 18840885 -147809411 + MIR SINE MIR 3 262 0 5 728 4023 143 184 65 chrX 18841153 18841949 -147808347 - RLTR25B LTR ERVK 0 1028 123 5 728 186 43 0 0 chrX 18841949 18841972 -147808324 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 728 4023 143 184 65 chrX 18841972 18842094 -147808202 - RLTR25B LTR ERVK -906 122 1 5 728 292 259 0 0 chrX 18842293 18842347 -147807949 - ID4 SINE ID -28 55 2 5 728 300 258 29 29 chrX 18842392 18842460 -147807836 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 5 728 324 328 43 29 chrX 18842605 18842812 -147807484 + L1ME3 LINE L1 5856 6065 -97 5 728 658 118 67 52 chrX 18844433 18844567 -147805729 - URR1B DNA MER1_type 0 225 90 5 728 293 282 160 32 chrX 18844434 18844621 -147805675 + CYRA11_Mm Unknown Y-chromosome 172 382 -235 5 728 2218 121 9 0 chrX 18844728 18845075 -147805221 - Lx LINE L1 -3 6651 6302 5 728 17275 52 0 0 chrX 18845323 18848296 -147802000 - L1Md_F2 LINE L1 -12 6570 3598 5 728 597 238 25 0 chrX 18848388 18848510 -147801786 - B1F1 SINE Alu -19 130 6 5 728 2286 98 21 0 chrX 18848722 18849049 -147801247 - L1_Mus4 LINE L1 -2 6634 6301 5 728 243 267 0 0 chrX 18849238 18849298 -147800998 - MER46C DNA MER2_type -10 328 269 5 728 21 36 0 0 chrX 18850347 18850375 -147799921 + AT_rich Low_complexity Low_complexity 1 28 0 5 728 276 267 26 13 chrX 18850688 18850764 -147799532 + ID4_ SINE ID 4 80 -3 5 728 251 238 68 91 chrX 18851021 18851109 -147799187 - RMER15 LTR ERVL -154 421 336 5 728 6964 29 2 1 chrX 18852010 18852825 -147797471 + L1Md_T LINE L1 5766 6581 -1 5 728 254 219 0 0 chrX 18852831 18852872 -147797424 - PB1D9 SINE Alu -78 42 2 5 728 316 356 40 25 chrX 18853035 18853234 -147797062 + MIRb SINE MIR 26 227 -41 5 728 568 382 36 24 chrX 18853271 18853523 -147796773 - LTR16C LTR ERVL -13 476 222 5 728 776 143 0 5 chrX 18853560 18853682 -147796614 + B1_Mur2 SINE Alu 3 120 -29 5 728 411 38 0 0 chrX 18853702 18853755 -147796541 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 728 298 312 80 74 chrX 18853784 18854097 -147796199 - B4A SINE B4 -11 281 3 5 728 503 178 0 32 chrX 18854119 18854212 -147796084 - B1_Mur4 SINE Alu -13 137 48 5 728 888 241 60 0 chrX 18854468 18854667 -147795629 + B3 SINE B2 1 211 -5 5 728 245 51 0 25 chrX 18855421 18855461 -147794835 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 728 2575 205 41 19 chrX 18855823 18856386 -147793910 - RMER15 LTR ERVL 0 575 1 5 728 1675 298 107 34 chrX 18856519 18857230 -147793066 + Tigger6a DNA MER2_type 1 763 -320 5 728 545 297 162 0 chrX 18857709 18857894 -147792402 - B3 SINE B2 0 216 2 5 728 27 106 0 0 chrX 18858005 18858109 -147792187 + AT_rich Low_complexity Low_complexity 1 104 0 5 728 462 313 7 43 chrX 18858190 18858330 -147791966 + B3 SINE B2 28 162 -54 5 728 2422 259 65 11 chrX 18858426 18859083 -147791213 - Lx6 LINE L1 0 7460 6768 5 728 333 0 0 0 chrX 18859083 18859120 -147791176 + (TTA)n Simple_repeat Simple_repeat 1 37 0 5 728 2447 223 74 24 chrX 18859120 18860223 -147790073 - Lx6 LINE L1 -583 6475 5321 5 728 3586 176 26 40 chrX 18860599 18861299 -147788997 + RLTR17 LTR ERVK 1 690 -2 5 728 436 310 62 36 chrX 18861848 18862321 -147787975 - RLTR6-int LTR ERV1 -128 7650 7349 5 728 927 183 0 0 chrX 18863291 18863471 -147786825 + (TA)n Simple_repeat Simple_repeat 1 180 0 5 728 281 256 39 0 chrX 18863820 18863898 -147786398 - MMERGLN-int LTR ERV1 -2014 5587 5507 5 728 1469 336 71 53 chrX 18864113 18866312 -147783984 - MMERGLN-int LTR ERV1 -2384 5394 3079 5 728 394 240 47 47 chrX 18866326 18866453 -147783843 - MMERGLN-int LTR ERV1 -4558 2998 2872 5 728 17529 179 29 30 chrX 18867301 18868170 -147782126 - L1_Mur3 LINE L1 -563 5317 4446 5 728 1223 90 79 0 chrX 18868170 18868348 -147781948 - B2_Mm2 SINE B2 -3 192 1 5 728 17529 179 29 30 chrX 18868348 18870655 -147779641 - L1_Mur3 LINE L1 -1435 4445 2067 5 728 426 108 0 0 chrX 18870655 18870720 -147779576 + (TGG)n Simple_repeat Simple_repeat 1 65 0 5 728 17529 182 32 32 chrX 18870720 18871797 -147778499 - L1_Mur3 LINE L1 -3814 2066 1066 5 728 778 230 57 0 chrX 18871919 18872149 -147778147 - L1_Mur3 LINE L1 -6618 1110 868 5 728 2960 82 12 26 chrX 18872429 18872854 -147777442 - BGLII LTR ERVK -2 419 1 5 728 235 315 56 11 chrX 18873397 18873487 -147776809 - RMER12 LTR ERVK -481 841 748 5 11 866 272 11 6 chrX 18874244 18874425 -147775871 - ID_B1 SINE B4 -42 182 1 5 729 236 143 0 51 chrX 18874445 18874504 -147775792 - L1MB4 LINE L1 0 6183 6127 5 729 690 270 26 0 chrX 18874510 18874662 -147775634 + ID_B1 SINE B4 67 222 -2 5 729 433 250 36 7 chrX 18874662 18874799 -147775497 - L1MB2 LINE L1 -60 6111 5971 5 729 851 296 108 21 chrX 18874869 18875194 -147775102 + MLT1A0 LTR MaLR 5 357 -8 5 729 283 273 0 0 chrX 18876021 18876087 -147774209 - LTR40b LTR ERVL -2 460 395 5 729 406 287 14 65 chrX 18876153 18876291 -147774005 - LTR40b LTR ERVL -207 255 125 5 729 540 326 139 88 chrX 18876469 18876775 -147773521 - MER21B LTR ERV1 -158 705 367 5 729 756 97 0 0 chrX 18876775 18876888 -147773408 + L1_Mus1 LINE L1 6455 6567 0 5 729 540 326 139 88 chrX 18876888 18877112 -147773184 - MER21B LTR ERV1 -497 366 149 5 729 322 322 163 6 chrX 18877653 18877831 -147772465 - Tigger5 DNA MER2_type -2200 206 1 5 729 601 325 25 0 chrX 18877955 18878115 -147772181 + B3A SINE B2 6 169 -29 5 729 274 308 39 0 chrX 18878366 18878444 -147771852 + ID4 SINE ID 3 83 0 5 729 227 285 106 0 chrX 18878647 18878770 -147771526 - L2 LINE L2 -901 2518 2383 5 729 32 26 0 0 chrX 18878835 18878874 -147771422 + AT_rich Low_complexity Low_complexity 1 39 0 5 729 255 359 0 0 chrX 18880904 18880968 -147769328 + MIR SINE MIR 19 82 -180 5 729 381 238 28 28 chrX 18881028 18881136 -147769160 - PB1D10 SINE Alu -9 108 1 5 729 472 250 62 9 chrX 18881372 18881485 -147768811 + RSINE1 SINE B4 4 122 -43 5 729 492 270 32 26 chrX 18881521 18881677 -147768619 - MER3 DNA MER1_type -50 159 3 5 729 285 320 0 0 chrX 18882220 18882295 -147768001 - ID4 SINE ID -8 75 1 5 729 2031 165 24 34 chrX 18882866 18883248 -147767048 - ORR1C1 LTR MaLR 0 378 1 5 729 4711 227 95 32 chrX 18883249 18884536 -147765760 - ORR1C1-int LTR MaLR -1 1369 2 5 729 2164 184 5 0 chrX 18884537 18884913 -147765383 - ORR1C1 LTR MaLR 0 378 1 5 729 34 0 0 0 chrX 18884922 18884956 -147765340 + AT_rich Low_complexity Low_complexity 1 34 0 5 729 979 244 10 0 chrX 18885036 18885245 -147765051 - B3 SINE B2 -5 211 1 5 729 311 336 82 0 chrX 18886572 18886706 -147763590 + MIR3 SINE MIR 6 150 -58 5 729 339 303 44 36 chrX 18886752 18886889 -147763407 + B1F1 SINE Alu 2 139 -10 6 729 1373 188 89 7 chrX 18886980 18887237 -147763059 + ORR1B1 LTR MaLR 112 374 -5 6 729 1383 231 136 42 chrX 18887275 18887818 -147762478 + L1MA7 LINE L1 5692 6285 -6 6 729 376 253 0 0 chrX 18888008 18888087 -147762209 - ID4 SINE ID -3 80 2 6 729 400 335 102 0 chrX 18888491 18888697 -147761599 + LTR33 LTR ERVL 280 506 -9 6 729 291 317 162 21 chrX 18888696 18888980 -147761316 - LTR33A_ LTR ERVL -7 524 201 6 729 247 361 68 43 chrX 18889081 18889243 -147761053 + MIRc SINE MIR 83 248 -20 6 729 312 305 14 79 chrX 18889923 18890029 -147760267 + MER5B DNA MER1_type 2 103 -75 6 729 195 42 0 0 chrX 18890029 18890053 -147760243 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 729 312 305 14 79 chrX 18890053 18890085 -147760211 + MER5B DNA MER1_type 104 131 -47 6 729 360 0 0 0 chrX 18890115 18890155 -147760141 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 729 183 237 0 0 chrX 18890156 18890194 -147760102 + MER5B DNA MER1_type 138 175 -3 6 729 219 270 13 46 chrX 18890533 18890641 -147759655 - MIR SINE MIR -123 145 40 6 729 189 0 0 0 chrX 18891164 18891185 -147759111 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 6 729 253 279 16 0 chrX 18891513 18891574 -147758722 + B4 SINE B4 9 70 -222 6 729 1264 326 68 42 chrX 18892050 18892598 -147757698 - MER74B LTR ERVL 0 622 61 6 729 679 248 7 14 chrX 18892786 18892925 -147757371 - B1F SINE Alu -3 146 9 6 729 1269 153 163 11 chrX 18892964 18893197 -147757099 + Lx9 LINE L1 7234 7476 -168 6 729 198 0 0 0 chrX 18893197 18893219 -147757077 + (TA)n Simple_repeat Simple_repeat 2 23 0 6 729 1269 153 163 11 chrX 18893219 18893335 -147756961 + Lx9 LINE L1 7477 7635 -9 6 729 234 0 0 0 chrX 18893572 18893598 -147756698 + (TC)n Simple_repeat Simple_repeat 2 27 0 6 729 384 22 0 0 chrX 18893598 18893642 -147756654 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 729 312 70 0 0 chrX 18893642 18893684 -147756612 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 729 215 61 0 29 chrX 18894819 18894853 -147755443 + (TTA)n Simple_repeat Simple_repeat 3 35 0 6 729 401 271 46 15 chrX 18894853 18894984 -147755312 - MIRb SINE MIR -109 159 25 6 729 420 97 0 0 chrX 18895287 18895349 -147754947 + (GAA)n Simple_repeat Simple_repeat 2 63 0 6 729 389 109 0 15 chrX 18895989 18896054 -147754242 + (TCC)n Simple_repeat Simple_repeat 2 65 0 6 729 391 315 146 0 chrX 18896067 18896197 -147754099 - ID_B1 SINE B4 -27 197 49 6 729 198 71 0 0 chrX 18896198 18896226 -147754070 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 6 729 6025 66 26 0 chrX 18896232 18897051 -147753245 - L1_Mus2 LINE L1 -1 6565 5726 6 729 272 319 0 65 chrX 18897051 18897128 -147753168 - ID SINE ID -151 73 2 6 729 306 0 0 0 chrX 18897422 18897456 -147752840 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 729 765 237 131 16 chrX 18897872 18898117 -147752179 - RMER15 LTR ERVL 0 575 303 6 729 230 224 33 183 chrX 18898145 18898298 -147751998 - RMER15 LTR ERVL -443 132 3 6 729 720 294 24 5 chrX 18898465 18898670 -147751626 + B3 SINE B2 3 211 -5 6 729 449 290 0 6 chrX 18898689 18898859 -147751437 + L1MA5 LINE L1 6128 6296 -4 6 729 583 272 28 99 chrX 18898870 18899082 -147751214 + B3A SINE B2 2 198 0 6 729 1901 203 74 5 chrX 18899113 18899490 -147750806 - MTC LTR MaLR -14 407 5 6 729 382 260 67 28 chrX 18899591 18899769 -147750527 + Lx9 LINE L1 7357 7541 -103 6 729 1194 207 176 13 chrX 18900142 18900455 -147749841 - ORR1D2 LTR MaLR 0 370 7 6 729 1136 88 7 0 chrX 18900871 18901018 -147749278 - B1_Mus1 SINE Alu 0 148 1 6 729 584 289 38 41 chrX 18901639 18902069 -147748227 - L1ME1 LINE L1 -19 6165 5726 6 729 831 161 15 0 chrX 18902084 18902221 -147748075 - B1_Mur3 SINE Alu 0 149 11 6 729 841 261 83 43 chrX 18902221 18902593 -147747703 - L1ME1 LINE L1 -449 5730 5344 6 729 702 167 113 17 chrX 18902989 18903166 -147747130 - B2_Mm2 SINE B2 -1 194 1 6 729 226 337 124 38 chrX 18903182 18903287 -147747009 + ID_B1 SINE B4 80 193 -31 6 729 248 325 12 24 chrX 18903648 18903730 -147746566 - RSINE1 SINE B4 -2 163 83 6 729 1332 230 219 38 chrX 18903819 18904290 -147746006 + RMER15 LTR ERVL 19 574 -1 6 729 480 309 72 30 chrX 18904318 18904485 -147745811 - B4 SINE B4 -114 178 5 6 729 301 294 29 0 chrX 18904900 18904968 -147745328 - AluG_3 SINE Alu -90 221 152 6 729 2981 40 51 0 chrX 18905339 18905710 -147744586 - RLTR10 LTR ERVK 0 390 1 6 729 369 148 0 0 chrX 18906115 18906196 -147744100 + (TCTCTG)n Simple_repeat Simple_repeat 2 82 0 6 729 546 242 353 36 chrX 18906229 18906450 -147743846 - B4 SINE B4 0 292 2 6 729 388 115 0 47 chrX 18907285 18907348 -147742948 + ORR1C2 LTR MaLR 1 60 -324 6 729 1136 191 78 137 chrX 18907348 18907670 -147742626 - RLTR18B LTR ERVK -1 511 209 6 729 252 0 0 0 chrX 18907677 18907705 -147742591 + (TC)n Simple_repeat Simple_repeat 2 29 0 6 729 189 0 0 0 chrX 18907705 18907726 -147742570 + (CA)n Simple_repeat Simple_repeat 1 21 0 6 729 369 0 0 0 chrX 18907730 18907771 -147742525 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 729 284 389 76 0 chrX 18907780 18907911 -147742385 + MIRb SINE MIR 14 154 -114 6 729 7024 89 15 5 chrX 18908042 18909492 -147740804 - L1_Mus1 LINE L1 0 6654 5099 6 729 29940 97 5 24 chrX 18909495 18915483 -147734813 - L1Md_F2 LINE L1 0 6582 725 6 729 361 256 60 36 chrX 18915453 18915619 -147734677 - L1Md_F2 LINE L1 -5772 844 675 6 729 425 249 14 99 chrX 18915669 18915900 -147734396 - L1VL1 LINE L1 -6022 400 61 6 729 417 179 0 0 chrX 18917020 18917104 -147733192 + CT-rich Low_complexity Low_complexity 2 85 0 6 729 583 279 14 16 chrX 18917114 18917276 -147733020 - ID_B1 SINE B4 -47 245 86 6 729 21 0 0 0 chrX 18917349 18917370 -147732926 + AT_rich Low_complexity Low_complexity 1 21 0 6 729 220 247 11 22 chrX 18918113 18918204 -147732092 + T-rich Low_complexity Low_complexity 1 90 0 6 729 2475 204 98 105 chrX 18918580 18919478 -147730818 + RLTR13D6 LTR ERVK 1 892 -10 6 729 496 252 35 35 chrX 18919569 18919713 -147730583 - B1_Mus2 SINE Alu -2 145 2 6 729 300 326 152 0 chrX 18919783 18919875 -147730421 - PB1D7 SINE Alu -8 112 7 6 729 740 246 57 4 chrX 18919891 18920120 -147730176 + MER33 DNA MER1_type 40 280 -44 6 729 417 306 32 24 chrX 18920251 18920375 -147729921 + RSINE1 SINE B4 12 136 -29 6 729 270 0 0 0 chrX 18920376 18920406 -147729890 + (TC)n Simple_repeat Simple_repeat 1 30 0 6 729 741 124 0 0 chrX 18920406 18920534 -147729762 + (CA)n Simple_repeat Simple_repeat 1 129 0 6 729 227 257 207 0 chrX 18920703 18920843 -147729453 - L1MCc LINE L1 -5074 2054 1886 6 729 310 276 1 57 chrX 18920889 18921013 -147729283 - L1MCc LINE L1 -5120 1917 1767 6 729 477 284 79 69 chrX 18921063 18921252 -147729044 - B3A SINE B2 -6 192 2 6 729 195 125 0 0 chrX 18921392 18921432 -147728864 + (T)n Simple_repeat Simple_repeat 1 40 0 6 729 523 263 50 46 chrX 18921434 18921752 -147728544 - L1MCc LINE L1 -4978 1444 1126 6 729 8728 68 25 21 chrX 18922103 18923636 -147726660 + Lx3_Mus LINE L1 5359 6895 -114 6 729 4207 161 23 93 chrX 18923636 18924606 -147725690 + RLTR13D6 LTR ERVK 1 902 0 6 729 9961 138 62 32 chrX 18924621 18924838 -147725458 + ETnERV3-int LTR ERVK 2 239 -7167 6 729 2134 135 134 60 chrX 18924838 18925287 -147725009 - RLTR45 LTR ERVK 0 482 1 6 729 10236 138 62 32 chrX 18925287 18925539 -147724757 + ETnERV3-int LTR ERVK 240 655 -5153 6 729 227 0 93 0 chrX 18925539 18925582 -147724714 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 6 729 10236 180 66 68 chrX 18925582 18926123 -147724173 + ETnERV3-int LTR ERVK 656 1190 -4618 6 729 738 91 0 0 chrX 18926123 18926244 -147724052 + (GGAAA)n Simple_repeat Simple_repeat 5 125 0 6 729 10236 180 66 68 chrX 18926244 18928551 -147721745 + ETnERV3-int LTR ERVK 1191 3499 -2309 6 729 1702 194 50 48 chrX 18928557 18929012 -147721284 + ETnERV3-int LTR ERVK 4396 4851 -957 6 729 4735 160 44 10 chrX 18929799 18930701 -147719595 + ETnERV3-int LTR ERVK 4852 5784 -24 6 729 284 167 69 84 chrX 18930701 18930733 -147719563 + Lx3_Mus LINE L1 6881 6921 -88 6 729 180 0 0 0 chrX 18930733 18930753 -147719543 + (GGGTG)n Simple_repeat Simple_repeat 3 22 0 6 729 284 167 69 84 chrX 18930753 18930851 -147719445 + Lx3_Mus LINE L1 6922 7009 0 6 729 245 278 83 0 chrX 18930889 18930961 -147719335 + PB1D10 SINE Alu 33 110 -7 6 729 575 328 120 25 chrX 18930950 18931273 -147719023 - Tigger5 DNA MER2_type -2051 355 2 6 729 351 314 55 25 chrX 18931508 18931707 -147718589 - L1M5 LINE L1 -554 5686 5482 6 729 425 195 12 24 chrX 18931749 18931833 -147718463 - B4 SINE B4 -208 84 2 6 729 256 274 60 44 chrX 18931902 18932085 -147718211 - L1M5 LINE L1 -1385 4761 4576 6 729 501 233 0 0 chrX 18932126 18932229 -147718067 + U6 snRNA snRNA 1 103 -4 6 729 566 145 11 1 chrX 18932231 18932338 -147717958 + Lx9 LINE L1 5640 5770 -1874 6 729 1102 231 98 34 chrX 18932345 18932640 -147717656 - RLTR46 LTR ERVK -6 314 1 6 729 239 132 0 36 chrX 18932640 18932695 -147717601 + Lx9 LINE L1 5729 5781 -66 6 729 1326 291 23 33 chrX 18932685 18933207 -147717089 + Lx9 LINE L1 6957 7473 -171 6 729 1279 165 24 0 chrX 18933212 18933418 -147716878 - ORR1C2 LTR MaLR 0 384 174 6 729 525 71 0 0 chrX 18933420 18933490 -147716806 + (GA)n Simple_repeat Simple_repeat 1 70 0 6 729 360 276 23 0 chrX 18933498 18933585 -147716711 - ORR1C2 LTR MaLR -289 89 1 6 729 306 188 59 0 chrX 18933599 18933700 -147716596 + Lx9 LINE L1 7531 7637 -7 6 729 727 206 0 21 chrX 18933735 18933879 -147716417 + B1_Mus1 SINE Alu 3 143 -5 6 729 225 257 95 60 chrX 18934256 18934372 -147715924 - RLTR25B LTR ERVK -411 617 498 6 729 2522 200 76 54 chrX 18934296 18934590 -147715706 - ORR1D2-int LTR MaLR -750 620 337 6 729 382 173 0 0 chrX 18934590 18934671 -147715625 + Lx2A1 LINE L1 6928 7008 0 6 729 2522 200 76 54 chrX 18934671 18934943 -147715353 - ORR1D2-int LTR MaLR -1034 336 59 6 729 543 53 0 0 chrX 18934943 18935018 -147715278 + (GA)n Simple_repeat Simple_repeat 2 76 0 6 729 2522 200 76 54 chrX 18935018 18935057 -147715239 - ORR1D2-int LTR MaLR -1312 58 1 6 729 1557 245 19 14 chrX 18935057 18935425 -147714871 - ORR1D2 LTR MaLR 0 370 1 6 729 607 206 9 0 chrX 18935513 18935620 -147714676 - B3 SINE B2 -108 108 1 6 729 380 37 19 0 chrX 18935760 18935814 -147714482 + (TA)n Simple_repeat Simple_repeat 2 56 0 6 729 345 62 0 0 chrX 18935886 18935934 -147714362 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 729 948 273 92 15 chrX 18936001 18936261 -147714035 - B4A SINE B4 -8 284 5 6 729 22 35 0 0 chrX 18936344 18936373 -147713923 + AT_rich Low_complexity Low_complexity 1 29 0 6 729 1137 69 0 20 chrX 18936375 18936523 -147713773 + B1_Mm SINE Alu 3 147 0 6 729 230 51 0 49 chrX 18936523 18936564 -147713732 + (CAAAA)n Simple_repeat Simple_repeat 1 39 0 6 729 195 42 0 0 chrX 18936564 18936588 -147713708 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 6 729 28 71 0 0 chrX 18936588 18936644 -147713652 + AT_rich Low_complexity Low_complexity 1 56 0 7 729 753 222 87 5 chrX 18936645 18936840 -147713456 - B3 SINE B2 -4 212 2 7 729 472 290 0 18 chrX 18936923 18937032 -147713264 - B1F SINE Alu -31 118 12 7 729 416 316 36 14 chrX 18937083 18937221 -147713075 - B1F1 SINE Alu -2 147 7 7 729 378 0 0 0 chrX 18937229 18937271 -147713025 + (TC)n Simple_repeat Simple_repeat 1 42 0 7 729 975 202 11 33 chrX 18937399 18937417 -147712879 - B3 SINE B2 -36 180 168 7 729 390 42 0 0 chrX 18937417 18937465 -147712831 + (TATG)n Simple_repeat Simple_repeat 4 51 0 7 729 975 202 11 33 chrX 18937465 18937630 -147712666 - B3 SINE B2 -49 167 1 7 729 639 310 68 18 chrX 18937630 18937848 -147712448 - B4A SINE B4 -62 230 2 7 729 29 28 0 0 chrX 18938065 18938101 -147712195 + AT_rich Low_complexity Low_complexity 1 36 0 7 729 22 0 0 0 chrX 18938200 18938222 -147712074 + AT_rich Low_complexity Low_complexity 1 22 0 7 729 602 239 0 0 chrX 18938439 18938548 -147711748 - B1_Mur4 SINE Alu -31 119 11 7 729 423 237 0 31 chrX 18938749 18938845 -147711451 - B4 SINE B4 -2 290 198 7 729 587 261 15 0 chrX 18938854 18938988 -147711308 - B1_Mur1 SINE Alu -13 136 1 7 729 30 0 0 0 chrX 18939192 18939222 -147711074 + AT_rich Low_complexity Low_complexity 1 30 0 7 729 200 288 0 27 chrX 18939451 18939526 -147710770 + MIR SINE MIR 164 236 -26 7 729 258 81 0 0 chrX 18939572 18939609 -147710687 + (TATG)n Simple_repeat Simple_repeat 4 40 0 7 729 1875 145 55 0 chrX 18939618 18939928 -147710368 - ORR1A2 LTR MaLR 0 327 1 7 729 1498 116 17 4 chrX 18939928 18940161 -147710135 - ORR1A2-int LTR MaLR 0 1963 1728 7 729 4239 146 50 28 chrX 18940121 18940940 -147709356 - RMER17A2 LTR ERVK -69 837 1 7 729 1023 75 13 33 chrX 18940940 18941091 -147709205 - MTB_Mm LTR MaLR -259 148 1 7 729 3500 81 111 17 chrX 18941126 18941642 -147708654 - LTRIS2 LTR ERV1 0 564 1 7 729 512 242 94 0 chrX 18941684 18941812 -147708484 - B4 SINE B4 -145 147 8 7 729 396 301 37 45 chrX 18941820 18942064 -147708232 + RLTR42-int LTR ERVK 1158 1399 -4123 7 729 520 265 8 25 chrX 18943094 18943214 -147707082 - ID_B1 SINE B4 -105 119 2 7 729 23 54 0 0 chrX 18943408 18943445 -147706851 + AT_rich Low_complexity Low_complexity 1 37 0 7 729 576 358 52 15 chrX 18943476 18943748 -147706548 - B4A SINE B4 -3 289 8 7 729 302 268 0 0 chrX 18944276 18944332 -147705964 + PB1D10 SINE Alu 54 109 -8 7 729 702 190 7 60 chrX 18944342 18944493 -147705803 - B1_Mur2 SINE Alu -3 146 4 7 729 233 271 33 33 chrX 18944640 18944701 -147705595 - ID_B1 SINE B4 -130 94 34 7 729 13410 172 43 22 chrX 18944701 18944999 -147705297 + L1_Mur3 LINE L1 2932 3225 -2655 7 729 477 0 0 0 chrX 18944999 18945052 -147705244 + (GA)n Simple_repeat Simple_repeat 2 54 0 7 729 13410 172 43 22 chrX 18945052 18947533 -147702763 + L1_Mur3 LINE L1 3226 5769 -111 7 729 550 233 13 27 chrX 18947532 18947682 -147702614 + Lx6 LINE L1 7313 7460 0 7 729 23 0 0 0 chrX 18947693 18947716 -147702580 + AT_rich Low_complexity Low_complexity 1 23 0 7 729 11009 44 5 0 chrX 18947716 18949772 -147700524 - L1Md_F3 LINE L1 -17 6567 4502 7 729 828 112 120 0 chrX 18950180 18950305 -147699991 + B1_Mus1 SINE Alu 2 141 -7 7 729 252 0 0 0 chrX 18950308 18950336 -147699960 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 7 729 182 267 187 0 chrX 18950984 18951059 -147699237 - MER5A DNA MER1_type 0 189 101 7 729 325 313 0 0 chrX 18951157 18951240 -147699056 - PB1D10 SINE Alu -2 115 33 7 729 466 385 22 11 chrX 18951382 18951566 -147698730 - MER5A DNA MER1_type 0 189 4 7 729 266 299 15 0 chrX 18951630 18951697 -147698599 - ID4 SINE ID -1 82 15 7 729 243 0 0 0 chrX 18951857 18951884 -147698412 + (TA)n Simple_repeat Simple_repeat 1 27 0 7 729 980 144 60 44 chrX 18952192 18952374 -147697922 - B2_Mm2 SINE B2 -9 186 2 7 729 22 56 0 0 chrX 18952494 18952530 -147697766 + AT_rich Low_complexity Low_complexity 1 36 0 7 729 878 157 0 0 chrX 18952627 18952767 -147697529 + B1_Mur3 SINE Alu 9 148 -1 7 729 590 290 60 49 chrX 18952951 18953136 -147697160 + B3A SINE B2 3 189 -9 7 729 286 207 17 17 chrX 18953310 18953369 -147696927 + PB1D10 SINE Alu 26 84 -33 7 729 222 235 0 0 chrX 18953551 18953632 -147696664 + (TG)n Simple_repeat Simple_repeat 2 82 0 7 729 1451 86 13 35 chrX 18953937 18953968 -147696328 + L1_Mus1 LINE L1 5624 5654 -984 7 729 5533 69 1 1 chrX 18953968 18954716 -147695580 - L1_Mus1 LINE L1 0 6567 5850 7 729 1509 60 1 2 chrX 18954716 18954913 -147695383 + L1_Mus1 LINE L1 5655 5848 -719 7 729 887 159 0 21 chrX 18955139 18955280 -147695016 + B1_Mus2 SINE Alu 4 141 -6 7 729 642 185 0 0 chrX 18955307 18955437 -147694859 + GA-rich Low_complexity Low_complexity 3 132 0 7 729 420 310 8 25 chrX 18955501 18955620 -147694676 + PB1D10 SINE Alu 1 117 0 7 729 252 0 0 0 chrX 18955945 18955973 -147694323 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 7 729 2761 36 9 0 chrX 18956000 18956334 -147693962 - L1_Mus1 LINE L1 -2 6565 6229 7 729 196 321 0 0 chrX 18956352 18956405 -147693891 - L2a LINE L2 -2 3424 3372 7 729 1018 76 0 70 chrX 18956956 18957105 -147693191 + B1_Mm SINE Alu 1 138 -9 7 729 615 48 0 0 chrX 18957105 18957188 -147693108 + (CAAAC)n Simple_repeat Simple_repeat 2 84 0 7 729 293 344 154 76 chrX 18957326 18957523 -147692773 - L2a LINE L2 -5 3421 3190 7 729 405 0 0 0 chrX 18957523 18957568 -147692728 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 729 293 344 154 76 chrX 18957568 18957832 -147692464 - L2a LINE L2 -237 3189 2924 7 729 405 0 0 0 chrX 18959732 18959777 -147690519 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 729 185 0 0 39 chrX 18960087 18960113 -147690183 + (ATG)n Simple_repeat Simple_repeat 1 25 0 7 729 768 307 0 6 chrX 18960434 18960611 -147689685 - B4 SINE B4 -18 274 99 7 729 582 15 0 0 chrX 18960628 18960695 -147689601 + (TC)n Simple_repeat Simple_repeat 2 68 0 7 729 796 208 14 0 chrX 18960729 18960873 -147689423 - B1_Mm SINE Alu -1 146 1 7 729 2528 142 16 0 chrX 18961009 18961396 -147688900 - ORR1B1 LTR MaLR -1 393 1 7 729 337 246 14 0 chrX 18961662 18961731 -147688565 - RMER30 DNA MER1_type 0 202 133 7 729 781 260 75 0 chrX 18962576 18962776 -147687520 + B3 SINE B2 2 216 0 7 729 214 239 328 0 chrX 18962834 18962901 -147687395 + RSINE1 SINE B4 38 126 -39 7 729 232 284 62 0 chrX 18962956 18963037 -147687259 - L1MEg LINE L1 -4987 1097 1012 7 729 445 309 60 47 chrX 18964185 18964415 -147685881 + B4 SINE B4 75 288 -4 7 729 243 188 0 0 chrX 18964587 18964635 -147685661 + CT-rich Low_complexity Low_complexity 4 51 0 7 729 576 290 167 0 chrX 18964843 18965029 -147685267 + ID_B1 SINE B4 1 217 -7 7 729 232 228 18 82 chrX 18965305 18965415 -147684881 - L1MC5 LINE L1 -50 7911 7809 7 729 4941 94 13 1 chrX 18965464 18966156 -147684140 - L1_Mus4 LINE L1 -4 6632 5933 7 729 387 0 0 0 chrX 18966296 18966339 -147683957 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 729 356 312 139 49 chrX 18966677 18967064 -147683232 - Charlie25 DNA MER1_type -1 2523 2102 7 729 375 23 0 0 chrX 18967181 18967225 -147683071 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 729 392 311 98 0 chrX 18967810 18967932 -147682364 - RSINE1 SINE B4 -31 134 1 7 729 696 317 87 29 chrX 18967932 18968320 -147681976 - Charlie25 DNA MER1_type -544 1980 1569 7 729 213 291 150 41 chrX 18968392 18968539 -147681757 - MIR SINE MIR -97 165 3 7 729 493 340 118 43 chrX 18968723 18969179 -147681117 - MLT1G3 LTR MaLR -37 558 72 7 729 335 219 12 12 chrX 18969466 18969549 -147680747 - PB1D9 SINE Alu 0 120 38 7 729 1916 236 40 83 chrX 18969926 18970481 -147679815 + RMER5 LTR ERV1 4 534 0 7 729 591 355 90 16 chrX 18970482 18970854 -147679442 + MLT1G1 LTR MaLR 48 552 -27 7 729 3282 185 31 32 chrX 18970857 18971543 -147678753 - RMER6C LTR ERVK -5 685 1 7 729 1301 117 0 5 chrX 18971815 18972004 -147678292 - B2_Mm2 SINE B2 -7 188 1 7 729 215 373 57 29 chrX 18972034 18972139 -147678157 + MER5A DNA MER1_type 75 182 -7 7 729 1083 300 12 8 chrX 18972444 18972703 -147677593 - B4A SINE B4 -29 263 4 7 729 5115 109 26 20 chrX 18972893 18973988 -147676308 + L1Md_F LINE L1 387 1496 -4387 7 729 940 110 7 0 chrX 18974124 18974269 -147676027 + MusHAL1 LINE L1 227 372 -2340 7 729 9979 155 23 16 chrX 18974258 18976868 -147673428 + Lx LINE L1 4030 6651 -3 7 729 311 253 100 12 chrX 18977276 18977356 -147672940 + B4 SINE B4 4 90 -202 7 729 1155 273 11 3 chrX 18977362 18977645 -147672651 + B4 SINE B4 3 287 -5 7 729 435 291 52 7 chrX 18978084 18978219 -147672077 - B1F SINE Alu -7 142 2 7 729 609 261 0 9 chrX 18978325 18978441 -147671855 + B1F1 SINE Alu 1 115 -34 7 729 230 228 0 115 chrX 18978464 18978519 -147671777 - L1MA9 LINE L1 -16 6296 6247 7 729 351 197 13 26 chrX 18978519 18978597 -147671699 - ID4 SINE ID -5 78 2 7 729 230 228 0 115 chrX 18978597 18978645 -147671651 - L1MA9 LINE L1 -66 6246 6205 7 729 878 241 26 73 chrX 18979149 18979382 -147670914 + ID_B1 SINE B4 1 222 -2 7 729 183 273 75 15 chrX 18979586 18979653 -147670643 + MIRm SINE MIR 109 179 -97 7 729 297 279 90 37 chrX 18979986 18980120 -147670176 - MLT1H LTR MaLR 0 549 409 7 729 417 308 0 11 chrX 18980259 18980351 -147669945 - PB1D10 SINE Alu -25 92 2 7 729 717 284 16 27 chrX 18980698 18980886 -147669410 - B3 SINE B2 -25 191 6 7 729 389 20 20 0 chrX 18980895 18980945 -147669351 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 7 729 1046 274 9 0 chrX 18980945 18981160 -147669136 - B4A SINE B4 -75 217 1 7 729 1172 172 45 23 chrX 18981744 18981964 -147668332 + URR1A DNA MER1_type 2 226 0 7 729 8146 60 6 0 chrX 18982121 18983156 -147667140 + L1Md_F2 LINE L1 4546 5586 -297 8 729 8363 36 0 0 chrX 18983156 18984138 -147666158 + L1Md_F2 LINE L1 5587 6568 -14 8 729 362 273 119 28 chrX 18984390 18984533 -147665763 + ERVL-E-int LTR ERVL 4843 4998 -669 8 729 552 68 0 0 chrX 18984883 18984956 -147665340 + (TC)n Simple_repeat Simple_repeat 2 74 0 8 729 771 250 41 6 chrX 18984957 18985126 -147665170 - B3A SINE B2 -16 182 8 8 729 715 355 135 12 chrX 18985407 18985829 -147664467 + LTR33A_ LTR ERVL 1 474 -57 8 729 450 328 146 12 chrX 18986149 18986402 -147663894 + B4 SINE B4 1 287 -5 8 729 4603 172 57 23 chrX 18986515 18987393 -147662903 + RMER13B LTR ERVK 1 908 0 8 729 1524 286 81 75 chrX 18987648 18988571 -147661725 - L1MD2 LINE L1 -3 6356 5428 8 729 947 244 56 7 chrX 18988578 18988883 -147661413 - L1MD2 LINE L1 -1391 4755 4436 8 729 587 271 7 60 chrX 18988975 18989124 -147661172 - B1_Mur1 SINE Alu -1 148 8 8 729 677 12 0 12 chrX 18989146 18989229 -147661067 + (TCTA)n Simple_repeat Simple_repeat 2 83 0 8 729 256 320 0 104 chrX 18989229 18989344 -147660952 - PB1D10 SINE Alu -12 105 3 8 729 804 299 6 37 chrX 18989351 18989678 -147660618 - L1MD2 LINE L1 -1820 4326 4010 8 729 9165 47 0 10 chrX 18989657 18989683 -147660613 - L1Md_A LINE L1 0 5883 5859 8 729 5920 101 15 8 chrX 18989683 18990556 -147659740 - L1_Mus3 LINE L1 -2 6636 5758 8 729 9165 47 0 10 chrX 18990556 18991677 -147658619 - L1Md_A LINE L1 -25 5858 4747 8 729 6101 87 10 2 chrX 18991678 18993319 -147656977 - L1Md_A LINE L1 -3862 2021 410 8 729 23042 143 32 14 chrX 18993317 18994663 -147655633 - L1VL4 LINE L1 -424 5459 4104 8 729 3070 61 2 15 chrX 18994663 18995064 -147655232 - MTA_Mm LTR MaLR 0 396 1 8 729 23042 154 30 19 chrX 18995064 18998478 -147651818 - L1VL4 LINE L1 -1780 4103 640 8 729 252 296 24 101 chrX 18998482 18998689 -147651607 - L1MD2 LINE L1 -2104 4042 3852 8 729 22 56 0 0 chrX 18998754 18998790 -147651506 + AT_rich Low_complexity Low_complexity 1 36 0 8 729 7284 86 11 2 chrX 18998792 19000000 -147650296 - L1_Mus2 LINE L1 0 6566 5353 8 729 6163 113 28 5 chrX 19000000 19000998 -147649298 - L1_Mm LINE L1 -531 5352 4332 1 729 250 291 62 12 chrX 19001010 19001090 -147649206 - BC1_Mm scRNA scRNA -67 85 2 2 729 23 0 0 0 chrX 19001131 19001154 -147649142 + AT_rich Low_complexity Low_complexity 1 23 0 3 729 819 276 41 26 chrX 19001154 19001541 -147648755 - L1MDa LINE L1 -2372 4165 3773 4 729 747 282 42 114 chrX 19001544 19001766 -147648530 - MTD LTR MaLR -102 317 121 5 729 384 119 0 0 chrX 19001766 19001825 -147648471 + (ATG)n Simple_repeat Simple_repeat 2 60 0 6 729 747 282 42 114 chrX 19001825 19001934 -147648362 - MTD LTR MaLR -299 120 11 5 729 189 0 0 0 chrX 19002232 19002253 -147648043 + (T)n Simple_repeat Simple_repeat 1 21 0 7 729 1754 214 15 3 chrX 19002273 19002614 -147647682 - RMER15 LTR ERVL 0 575 231 8 729 663 184 27 66 chrX 19002614 19002820 -147647476 + ORR1B1 LTR MaLR 1 235 -159 9 729 1387 282 84 51 chrX 19002820 19003157 -147647139 + RLTR20D LTR ERVK 1 343 -225 1 729 374 176 73 0 chrX 19003157 19003225 -147647071 - tRNA-Lys-AAG tRNA tRNA 0 76 4 1 729 1387 282 84 51 chrX 19003225 19003346 -147646950 + RLTR20D LTR ERVK 344 464 -104 1 729 315 0 0 0 chrX 19003346 19003381 -147646915 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 729 1387 282 84 51 chrX 19003381 19003471 -147646825 + RLTR20D LTR ERVK 465 567 -1 1 729 1024 105 6 41 chrX 19003471 19003640 -147646656 + ORR1B1 LTR MaLR 232 394 0 1 729 7146 181 31 51 chrX 19003640 19005204 -147645092 + ORR1B1-int LTR MaLR 1 1533 -430 1 91 616 276 86 60 chrX 19005205 19005555 -147644741 - RMER1B Other Other -600 742 45 1 730 447 262 221 62 chrX 19005804 19006044 -147644252 - L1MDa LINE L1 -4690 1943 1666 4 730 247 278 0 0 chrX 19006868 19006922 -147643374 + polypyrimidine Low_complexity Low_complexity 1 54 0 1 730 3988 200 52 15 chrX 19007380 19008252 -147642044 - RMER13B LTR ERVK -4 904 1 1 730 207 0 0 0 chrX 19008626 19008649 -147641647 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 730 804 350 58 4 chrX 19008860 19009135 -147641161 - B4 SINE B4 -2 290 1 1 730 223 93 0 44 chrX 19009144 19009189 -147641107 + (TCTA)n Simple_repeat Simple_repeat 2 44 0 1 730 12166 159 67 10 chrX 19009231 19010930 -147639366 - Lx4A LINE L1 -1 7057 5243 2 730 2217 122 22 0 chrX 19010930 19011250 -147639046 - ORR1A2 LTR MaLR 0 327 1 2 730 12166 142 28 11 chrX 19011250 19012835 -147637461 - Lx4A LINE L1 -635 5242 3640 2 730 763 196 36 0 chrX 19012817 19012985 -147637311 - Lx4A LINE L1 -3650 2227 2052 2 730 219 88 0 0 chrX 19012985 19013019 -147637277 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 730 763 196 36 0 chrX 19013019 19013069 -147637227 - Lx4A LINE L1 -3826 2051 2002 2 730 36140 31 0 0 chrX 19013107 19019348 -147630948 - L1Md_T LINE L1 0 6585 250 2 730 244 283 0 0 chrX 19019371 19019417 -147630879 - B4A SINE B4 -161 131 86 2 730 2908 146 33 132 chrX 19020614 19021287 -147629009 + RMER6A LTR ERVK 151 756 0 2 730 1113 223 0 0 chrX 19021288 19021503 -147628793 - RodERV21-int LTR ERV1 -3414 1577 1363 2 730 2299 207 39 10 chrX 19021544 19022038 -147628258 - RMER1B Other Other -5 1061 554 2 730 262 208 0 186 chrX 19022203 19022321 -147627975 - RLTR42-int LTR ERVK -3727 1795 1700 2 730 1365 81 38 0 chrX 19022426 19022611 -147627685 - B2_Mm2 SINE B2 -3 192 1 2 730 1019 225 9 4 chrX 19022633 19022861 -147627435 + RLTR42-int LTR ERVK 1107 1335 -4187 3 730 1019 225 9 4 chrX 19023089 19023317 -147626979 - RLTR42-int LTR ERVK -4187 1335 1107 2 730 1120 161 5 0 chrX 19023573 19023766 -147626530 - RodERV21-int LTR ERV1 -4009 982 789 2 730 2081 230 26 60 chrX 19023764 19024417 -147625879 - RodERV21-int LTR ERV1 -4345 646 16 2 730 250 297 200 15 chrX 19024471 19024601 -147625695 - RMER21B LTR ERV1 -275 567 414 3 730 246 207 0 0 chrX 19025383 19025441 -147624855 + CT-rich Low_complexity Low_complexity 2 59 0 3 730 180 0 0 0 chrX 19025724 19025744 -147624552 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 730 1056 116 0 0 chrX 19026504 19026651 -147623645 - B1_Mus1 SINE Alu 0 148 2 3 730 282 245 0 0 chrX 19026673 19026726 -147623570 + B1F SINE Alu 6 58 -91 3 730 24 0 0 0 chrX 19026834 19026858 -147623438 + AT_rich Low_complexity Low_complexity 1 24 0 3 730 245 275 127 9 chrX 19026991 19027101 -147623195 + MIR SINE MIR 114 236 -26 3 730 180 0 0 0 chrX 19027409 19027429 -147622867 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 730 517 256 31 0 chrX 19027433 19027562 -147622734 + MTD LTR MaLR 3 135 -284 3 730 12775 136 8 27 chrX 19027566 19030471 -147619825 + L1Md_F LINE L1 511 3382 -2501 4 730 1300 96 0 0 chrX 19030470 19030658 -147619638 + L1_Mus3 LINE L1 5676 5863 -775 4 730 3917 85 44 0 chrX 19030661 19031203 -147619093 + L1_Mus3 LINE L1 6066 6631 -7 4 730 1511 72 10 0 chrX 19031285 19031492 -147618804 + L1_Mus2 LINE L1 6356 6564 -2 4 730 255 250 106 12 chrX 19031582 19031667 -147618629 + MER5B DNA MER1_type 81 173 -5 4 730 809 137 114 0 chrX 19032545 19032676 -147617620 - B1_Mus1 SINE Alu -2 146 1 4 730 417 20 0 0 chrX 19032684 19032734 -147617562 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 730 474 253 11 80 chrX 19033366 19033542 -147616754 - RSINE1 SINE B4 0 165 2 4 730 490 245 162 37 chrX 19033760 19033951 -147616345 + ID_B1 SINE B4 2 216 -8 4 730 1732 197 83 0 chrX 19034440 19034825 -147615471 + Lx9 LINE L1 620 1036 -6572 4 730 19316 72 127 13 chrX 19034844 19038721 -147611575 - L1Md_F2 LINE L1 -14 6568 2214 4 730 4386 160 10 3 chrX 19038705 19039626 -147610670 - L1Md_F2 LINE L1 -4504 1379 451 4 730 6419 171 96 21 chrX 19039635 19040528 -147609768 + Lx9 LINE L1 1025 1940 -3907 4 730 221 0 0 33 chrX 19040528 19040558 -147609738 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 730 6419 178 139 31 chrX 19040558 19041647 -147608649 + Lx9 LINE L1 1941 3207 -2640 4 730 3515 161 224 59 chrX 19041647 19042529 -147607767 + RLTR25B LTR ERVK 1 1028 0 5 730 12155 149 57 33 chrX 19042529 19044691 -147605605 + Lx9 LINE L1 3202 5419 -428 4 730 264 77 0 0 chrX 19044691 19044730 -147605566 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 730 12155 157 59 31 chrX 19044730 19045214 -147605082 + Lx9 LINE L1 5420 5963 -1681 4 730 4838 169 39 6 chrX 19045214 19046103 -147604193 + Lx9 LINE L1 6341 7259 -385 4 730 3211 55 25 0 chrX 19046120 19046521 -147603775 - RLTR10A LTR ERVK 0 411 1 5 730 4720 68 32 16 chrX 19046521 19047209 -147603087 - RLTR10-int LTR ERVK -1 1986 1288 5 730 1598 57 0 0 chrX 19047210 19047421 -147602875 - IAP-d-int LTR ERVK -658 5884 5674 5 730 1753 40 137 24 chrX 19047433 19047688 -147602608 - IAP-d-int LTR ERVK -1015 5527 5244 5 730 6852 22 0 0 chrX 19047688 19048522 -147601774 - L1_Mm LINE L1 -101 5782 4949 5 730 2789 73 3 0 chrX 19048522 19048891 -147601405 + L1Md_T LINE L1 6213 6582 0 5 730 1480 103 62 0 chrX 19048891 19049115 -147601181 - IAP-d-int LTR ERVK -1298 5244 5007 5 730 362 123 0 0 chrX 19049115 19049172 -147601124 - IAP-d-int LTR ERVK -6039 503 447 5 730 420 319 28 28 chrX 19049191 19049514 -147600782 - RLTR10-int LTR ERVK -6017 1564 1242 5 730 4654 72 36 9 chrX 19049609 19050282 -147600014 - RLTR10-int LTR ERVK -995 992 302 5 730 2435 45 75 0 chrX 19050282 19050613 -147599683 - RLTR10A LTR ERVK 0 411 56 5 730 1204 74 0 0 chrX 19051266 19051414 -147598882 + B1_Mus1 SINE Alu 1 148 0 5 730 258 32 0 0 chrX 19051414 19051445 -147598851 + (A)n Simple_repeat Simple_repeat 1 31 0 5 730 186 133 0 0 chrX 19051441 19051471 -147598825 + (GGA)n Simple_repeat Simple_repeat 3 32 0 6 730 247 376 20 10 chrX 19051730 19051832 -147598464 - MER5A DNA MER1_type -61 128 26 6 730 651 103 0 49 chrX 19052068 19052191 -147598105 - L1Md_F2 LINE L1 0 6582 6466 6 730 4004 132 48 7 chrX 19052191 19052836 -147597460 - ORR1A2-int LTR MaLR -106 1857 1211 6 730 321 127 0 83 chrX 19052836 19052896 -147597400 - ORR1A2 LTR MaLR 0 394 340 6 730 7202 76 4 2 chrX 19052907 19054569 -147595727 - L1Md_F2 LINE L1 -10 6572 4905 6 730 1895 128 17 0 chrX 19054569 19054857 -147595439 - ORR1A2 LTR MaLR -34 293 1 6 730 34 0 0 0 chrX 19056550 19056584 -147593712 + AT_rich Low_complexity Low_complexity 1 34 0 6 730 216 0 0 0 chrX 19056779 19056803 -147593493 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 6 730 293 312 0 12 chrX 19057148 19057229 -147593067 + ID4 SINE ID 3 82 -1 6 730 448 143 53 18 chrX 19057369 19057483 -147592813 + Lx LINE L1 6537 6654 0 6 730 557 146 16 16 chrX 19058727 19058852 -147591444 + CT-rich Low_complexity Low_complexity 1 125 0 6 730 262 333 0 32 chrX 19058861 19058954 -147591342 - PB1D10 SINE Alu -5 112 23 7 730 583 134 0 0 chrX 19059737 19059819 -147590477 + B3 SINE B2 4 85 -131 7 730 513 216 10 0 chrX 19059814 19059911 -147590385 + B1_Mur2 SINE Alu 50 147 -2 7 730 901 133 7 14 chrX 19059944 19060089 -147590207 - B1_Mur4 SINE Alu -1 149 6 7 730 1608 275 57 45 chrX 19060416 19061083 -147589213 - L1MA5 LINE L1 -368 5932 5258 7 730 339 310 43 8 chrX 19061109 19061226 -147589070 - B4A SINE B4 -164 128 8 7 730 678 282 95 28 chrX 19061228 19061553 -147588743 - L1MA5 LINE L1 -1399 4744 4398 7 730 278 167 17 0 chrX 19061553 19061613 -147588683 + (TATG)n Simple_repeat Simple_repeat 3 63 0 7 730 854 179 0 7 chrX 19061613 19061759 -147588537 - B1_Mus1 SINE Alu -2 146 2 7 730 234 237 0 0 chrX 19061908 19061967 -147588329 + L1M2 LINE L1 3028 3086 -3057 7 730 492 294 0 48 chrX 19062011 19062200 -147588096 - L1MA5 LINE L1 -2096 4047 3868 7 730 25795 104 4 2 chrX 19062198 19063292 -147587004 - L1_Mm LINE L1 -53 5830 4734 7 730 317 24 24 0 chrX 19063292 19063334 -147586962 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 8 730 25795 104 4 2 chrX 19063334 19066035 -147584261 - L1_Mm LINE L1 -1150 4733 2027 7 730 4638 220 40 55 chrX 19066880 19068019 -147582277 + RLTR21 LTR ERVK 3 1129 -443 8 730 483 63 0 0 chrX 19068019 19068082 -147582214 + (TATG)n Simple_repeat Simple_repeat 4 66 0 8 730 4638 232 44 123 chrX 19068082 19068352 -147581944 + RLTR21 LTR ERVK 1130 1398 -6 8 730 234 0 0 0 chrX 19068394 19068420 -147581876 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 8 730 487 68 9 0 chrX 19068426 19068495 -147581801 - L1Md_F2 LINE L1 -355 6227 6147 8 730 7280 75 30 3 chrX 19068551 19069667 -147580629 - L1Md_F2 LINE L1 0 6582 5439 8 730 7433 78 4 1 chrX 19069668 19071304 -147578992 - L1VL1 LINE L1 -3832 2051 409 8 730 837 216 37 5 chrX 19071305 19071496 -147578800 + Lx6 LINE L1 7264 7460 0 8 730 3290 246 62 33 chrX 19071496 19071960 -147578336 - Lx8 LINE L1 -141 7332 6859 8 730 453 36 0 0 chrX 19071960 19072015 -147578281 + (CAACC)n Simple_repeat Simple_repeat 5 59 0 8 730 3290 246 62 33 chrX 19072015 19072275 -147578021 - Lx8 LINE L1 -615 6858 6593 8 730 564 56 0 0 chrX 19072275 19072347 -147577949 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 9 730 3290 246 62 33 chrX 19072347 19072590 -147577706 - Lx8 LINE L1 -881 6592 6338 8 730 573 186 142 0 chrX 19072631 19072744 -147577552 - B1_Mur4 SINE Alu -19 131 3 9 730 324 252 9 9 chrX 19072744 19072852 -147577444 - L1M2 LINE L1 -3100 3043 2936 9 730 513 333 49 0 chrX 19072904 19073048 -147577248 - RSINE1 SINE B4 -4 161 11 9 730 231 36 0 0 chrX 19073069 19073097 -147577199 + (TG)n Simple_repeat Simple_repeat 1 28 0 9 730 333 0 0 0 chrX 19073097 19073133 -147577163 + (GA)n Simple_repeat Simple_repeat 1 37 0 9 730 665 299 48 0 chrX 19073146 19073293 -147577003 - RSINE1 SINE B4 -10 155 2 9 730 1299 122 78 125 chrX 19073302 19073583 -147576713 + MT2A LTR ERVL 1 268 -265 9 730 631 93 0 36 chrX 19073583 19073695 -147576601 - L1Md_F2 LINE L1 -2 6580 6473 9 730 692 232 54 138 chrX 19073695 19073791 -147576505 + MT2A LTR ERVL 395 490 -94 9 730 333 0 0 0 chrX 19073797 19073834 -147576462 + (CA)n Simple_repeat Simple_repeat 2 38 0 9 730 450 0 0 0 chrX 19073838 19073888 -147576408 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 730 191 133 0 22 chrX 19074353 19074399 -147575897 + (TAA)n Simple_repeat Simple_repeat 2 46 0 1 730 969 284 83 2 chrX 19074613 19074761 -147575535 - L1MC3 LINE L1 -8 7777 7627 1 730 306 0 0 0 chrX 19074761 19074795 -147575501 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 730 969 284 83 2 chrX 19074795 19075045 -147575251 - L1MC3 LINE L1 -159 7626 7348 1 730 714 297 55 0 chrX 19075148 19075421 -147574875 - L1MC3 LINE L1 -604 7181 6894 1 730 316 268 69 35 chrX 19075431 19075547 -147574749 - MTEb LTR MaLR -4 375 256 1 730 417 242 112 8 chrX 19075766 19075891 -147574405 - L1MC3 LINE L1 -921 6864 6727 1 730 1187 98 6 28 chrX 19075902 19076059 -147574237 + B2_Mm1t SINE B2 1 158 -35 1 730 414 0 0 0 chrX 19076059 19076105 -147574191 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 1 730 1187 98 6 28 chrX 19076105 19076125 -147574171 + B2_Mm1t SINE B2 159 174 -19 1 730 441 0 0 0 chrX 19076203 19076252 -147574044 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 730 1054 244 108 82 chrX 19076270 19076691 -147573605 + MT2B LTR ERVL 1 554 -47 1 730 441 268 10 49 chrX 19076677 19076817 -147573479 - B3 SINE B2 -11 184 56 1 730 231 132 0 0 chrX 19076815 19076853 -147573443 + MT2A LTR ERVL 487 524 -9 9 730 1416 299 72 52 chrX 19076899 19077709 -147572587 - L1MC3 LINE L1 -1239 6546 5721 1 730 1604 311 46 50 chrX 19077720 19078326 -147571970 + MTE-int LTR MaLR 39 642 -938 1 730 1610 212 50 92 chrX 19078350 19078787 -147571509 - MTD LTR MaLR 0 419 1 1 730 1496 218 49 74 chrX 19078789 19079195 -147571101 - MTD-int LTR MaLR -2 1256 861 1 730 306 67 0 0 chrX 19079195 19079240 -147571056 + (T)n Simple_repeat Simple_repeat 1 45 0 1 730 1907 279 67 19 chrX 19079320 19079959 -147570337 - Lx8 LINE L1 -31 7442 6773 1 730 563 278 109 42 chrX 19080188 19080590 -147569706 - L1MD LINE L1 -1855 4291 3863 1 730 3952 184 33 57 chrX 19080758 19081538 -147568758 - L1_Rod LINE L1 -2766 3081 2321 1 730 5674 95 38 9 chrX 19081538 19082402 -147567894 + RMER17D LTR ERVK 1 889 0 1 730 1884 158 36 78 chrX 19082403 19082814 -147567482 - ORR1B1 LTR MaLR 0 394 1 1 730 3952 184 33 57 chrX 19082814 19083033 -147567263 - L1_Rod LINE L1 -3527 2320 2104 1 730 1300 239 4 0 chrX 19083034 19083294 -147567002 + Lx9 LINE L1 7067 7327 -317 1 730 250 260 0 0 chrX 19083384 19083434 -147566862 + ID_B1 SINE B4 168 217 -7 1 730 698 236 0 13 chrX 19083643 19083793 -147566503 - B1_Mur2 SINE Alu -1 148 1 1 730 189 74 0 0 chrX 19084039 19084066 -147566230 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 730 273 57 0 0 chrX 19084338 19084373 -147565923 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1 730 216 97 0 0 chrX 19085496 19085527 -147564769 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 730 234 91 0 0 chrX 19085605 19085638 -147564658 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1 730 585 200 157 0 chrX 19085649 19085764 -147564532 - RSINE1 SINE B4 -31 134 2 1 730 440 246 108 17 chrX 19086196 19086316 -147563980 - B1F SINE Alu -10 139 9 1 730 354 45 0 0 chrX 19086840 19086884 -147563412 + (A)n Simple_repeat Simple_repeat 1 44 0 1 730 33837 90 10 7 chrX 19087156 19093269 -147557027 - L1Md_F2 LINE L1 -14 6568 450 1 730 404 227 140 123 chrX 19093305 19093662 -147556634 - L1MA10 LINE L1 -36 6298 5936 1 730 230 211 62 194 chrX 19093730 19093859 -147556437 - B4 SINE B4 0 292 181 1 730 297 294 36 138 chrX 19094211 19094349 -147555947 - B1F2 SINE Alu -25 124 1 1 730 515 316 26 92 chrX 19094349 19094431 -147555865 - B4 SINE B4 -219 73 5 1 730 382 259 25 17 chrX 19094438 19094556 -147555740 - L1MA10 LINE L1 -230 5938 5820 1 730 291 28 0 0 chrX 19094556 19094592 -147555704 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 730 249 308 16 93 chrX 19094649 19094778 -147555518 - B1_Mm SINE Alu -28 119 1 1 730 484 247 146 33 chrX 19094778 19094838 -147555458 - B4 SINE B4 -205 87 11 1 730 407 214 122 0 chrX 19094911 19095009 -147555287 - PB1D10 SINE Alu -7 110 1 1 730 23 0 0 0 chrX 19095063 19095086 -147555210 + AT_rich Low_complexity Low_complexity 1 23 0 1 730 38421 34 0 1 chrX 19095213 19097297 -147552999 - L1Md_A LINE L1 -1 6581 4504 1 730 3387 39 87 2 chrX 19097297 19097735 -147552561 + IAPLTR2_Mm LTR ERVK 1 475 0 1 730 38421 56 10 13 chrX 19097735 19101953 -147548343 - L1Md_A LINE L1 -1380 4503 296 1 730 200 394 62 23 chrX 19101958 19102088 -147548208 - MIRb SINE MIR -113 155 21 1 730 183 217 109 0 chrX 19102430 19102476 -147547820 - L2 LINE L2 -3277 142 92 1 730 22 35 0 0 chrX 19102538 19102567 -147547729 + AT_rich Low_complexity Low_complexity 1 29 0 1 730 423 305 80 70 chrX 19102834 19102875 -147547421 + B4 SINE B4 35 77 -215 1 730 643 277 7 0 chrX 19102875 19103023 -147547273 + B1_Mur1 SINE Alu 1 149 0 1 730 24 32 0 0 chrX 19103372 19103403 -147546893 + AT_rich Low_complexity Low_complexity 1 31 0 1 730 22 0 0 0 chrX 19104038 19104060 -147546236 + AT_rich Low_complexity Low_complexity 1 22 0 1 730 611 48 12 0 chrX 19104738 19104821 -147545475 + (TTTTC)n Simple_repeat Simple_repeat 5 88 0 1 730 841 270 29 0 chrX 19105112 19105316 -147544980 + ID_B1 SINE B4 12 221 -3 1 730 330 353 0 0 chrX 19105847 19105963 -147544333 + PB1D10 SINE Alu 2 117 0 1 730 209 108 27 0 chrX 19105975 19106012 -147544284 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1 730 205 286 0 0 chrX 19106197 19106246 -147544050 + (TATATG)n Simple_repeat Simple_repeat 1 49 0 1 730 431 133 10 39 chrX 19106483 19106585 -147543711 - Lx LINE L1 -1 6653 6555 1 730 904 132 6 6 chrX 19106912 19107079 -147543217 + (TCCCC)n Simple_repeat Simple_repeat 1 167 0 1 730 443 18 18 0 chrX 19107066 19107122 -147543174 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 730 360 0 0 0 chrX 19107122 19107162 -147543134 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 730 875 291 138 7 chrX 19108559 19108955 -147541341 - L1MB8 LINE L1 -76 6102 5652 1 730 279 0 0 0 chrX 19109138 19109169 -147541127 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 730 9050 126 16 19 chrX 19109484 19111375 -147538921 - Lx2 LINE L1 -5 6992 5111 1 730 719 204 164 30 chrX 19111426 19111475 -147538821 + Lx7 LINE L1 7393 7441 -255 1 730 279 0 0 0 chrX 19111475 19111506 -147538790 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 730 405 0 0 0 chrX 19111506 19111550 -147538746 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 730 719 204 164 30 chrX 19111550 19111767 -147538529 + Lx7 LINE L1 7442 7694 -2 1 730 823 333 124 39 chrX 19111913 19112347 -147537949 + MLT2B2 LTR ERVL 1 471 -44 1 730 310 322 140 32 chrX 19112832 19113053 -147537243 - L2 LINE L2 -846 2573 2329 1 730 406 304 9 29 chrX 19113324 19113429 -147536867 - PB1D10 SINE Alu -5 112 10 1 730 552 261 79 7 chrX 19113471 19113610 -147536686 + B1_Mur2 SINE Alu 1 149 0 1 730 2047 171 96 3 chrX 19114144 19114497 -147535799 - ORR1B1 LTR MaLR -8 386 1 1 730 1799 194 32 6 chrX 19114497 19114831 -147535465 + ORR1D1 LTR MaLR 32 374 0 1 730 1917 101 10 15 chrX 19114955 19115292 -147535004 - RLTR13C2 LTR ERVK 0 893 473 1 730 282 29 0 0 chrX 19115293 19115328 -147534968 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 730 282 357 24 0 chrX 19115366 19115450 -147534846 + ID_B1 SINE B4 97 182 -42 1 730 797 254 13 86 chrX 19115482 19115715 -147534581 + ID_B1 SINE B4 2 217 -7 1 730 1031 261 111 19 chrX 19115726 19116202 -147534094 + L1MCa LINE L1 864 1383 -5125 1 730 327 287 0 47 chrX 19116241 19116347 -147533949 + B1F SINE Alu 40 140 -9 1 730 737 271 36 40 chrX 19116362 19116666 -147533630 + L1MCa LINE L1 1411 1713 -4795 1 730 24 0 0 0 chrX 19116684 19116708 -147533588 + AT_rich Low_complexity Low_complexity 1 24 0 1 730 1067 103 7 0 chrX 19116823 19116969 -147533327 + B1_Mus1 SINE Alu 1 147 -1 1 730 336 257 52 97 chrX 19116981 19117061 -147533235 + L1MCa LINE L1 1735 1806 -4702 1 730 3072 68 0 8 chrX 19117061 19117460 -147532836 + MTA_Mm LTR MaLR 1 396 0 1 730 336 257 52 97 chrX 19117460 19117534 -147532762 + L1MCa LINE L1 1807 1881 -4627 1 730 3547 165 315 34 chrX 19117538 19117860 -147532436 + Lx3_Mus LINE L1 3 332 -6652 1 730 7216 83 38 1 chrX 19117860 19118847 -147531449 + RLTR13D5 LTR ERVK 1 1023 0 1 730 31612 99 42 16 chrX 19118847 19124165 -147526131 + Lx3_Mus LINE L1 333 5916 -1093 1 730 196 28 83 0 chrX 19124165 19124201 -147526095 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 1 730 5158 90 21 18 chrX 19124201 19124629 -147525667 + Lx3_Mus LINE L1 5917 6348 -661 1 730 1620 55 0 0 chrX 19124629 19124847 -147525449 - L1_Mm LINE L1 -2128 3755 3538 1 730 10239 24 0 0 chrX 19124844 19126035 -147524261 + L1Md_T LINE L1 4396 5586 -297 1 730 8503 30 0 0 chrX 19126035 19127030 -147523266 + L1Md_T LINE L1 5587 6581 -1 1 730 2181 143 44 3 chrX 19127151 19127515 -147522781 - Lx2A1 LINE L1 0 7008 6630 1 730 584 199 76 0 chrX 19127567 19127698 -147522598 - MTD LTR MaLR -14 405 265 1 730 220 250 23 0 chrX 19127725 19127769 -147522527 - B1F SINE Alu -93 56 12 1 730 473 323 39 0 chrX 19127783 19127910 -147522386 - MER21B LTR ERV1 -689 174 43 1 730 205 150 0 48 chrX 19128210 19128252 -147522044 + (TTTG)n Simple_repeat Simple_repeat 4 43 0 1 730 4301 206 34 30 chrX 19128281 19129185 -147521111 + RMER13B LTR ERVK 1 908 0 1 730 285 29 0 0 chrX 19129353 19129387 -147520909 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1 730 441 294 60 30 chrX 19129419 19129587 -147520709 - L1MC LINE L1 -2181 5701 5529 1 730 24 0 0 0 chrX 19129910 19129934 -147520362 + AT_rich Low_complexity Low_complexity 1 24 0 1 730 712 323 46 0 chrX 19130323 19130518 -147519778 - ID_B1 SINE B4 -16 208 5 1 730 1757 188 59 72 chrX 19131295 19131491 -147518805 + ORR1C2 LTR MaLR 1 171 -213 1 730 1329 73 0 0 chrX 19131491 19131669 -147518627 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 1 730 1757 188 59 72 chrX 19131669 19131861 -147518435 + ORR1C2 LTR MaLR 172 384 0 1 730 278 367 9 18 chrX 19132285 19132396 -147517900 - PB1D10 SINE Alu -5 112 3 1 730 279 79 0 0 chrX 19134605 19134643 -147515653 + (A)n Simple_repeat Simple_repeat 1 38 0 1 730 336 324 25 62 chrX 19135717 19135878 -147514418 + ID_B1 SINE B4 70 224 0 1 730 714 204 0 14 chrX 19135740 19135879 -147514417 + B1_Mm SINE Alu 10 146 -1 1 730 461 309 39 11 chrX 19136159 19136380 -147513916 - L1MD2 LINE L1 -342 6017 5793 1 91 38346 5 1 0 chrX 19136382 19141544 -147508752 + L1Md_A LINE L1 422 5586 -297 2 731 8927 7 0 0 chrX 19141544 19142540 -147507756 + L1Md_A LINE L1 5587 6582 0 2 731 350 100 17 0 chrX 19142570 19142630 -147507666 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 731 375 379 14 35 chrX 19142691 19142836 -147507460 - RSINE1 SINE B4 -19 146 5 2 731 728 284 95 8 chrX 19142838 19143197 -147507099 - L1MC2 LINE L1 -515 5829 5434 2 731 21 0 0 0 chrX 19143223 19143244 -147507052 + AT_rich Low_complexity Low_complexity 1 21 0 2 731 1429 80 0 21 chrX 19143325 19143517 -147506779 + B2_Mm1t SINE B2 2 189 -4 2 731 757 349 50 17 chrX 19143520 19143922 -147506374 - L1MC1 LINE L1 -18 6315 5901 2 731 280 237 174 8 chrX 19143928 19144060 -147506236 + L1MC1 LINE L1 5345 5498 -846 2 731 378 336 73 15 chrX 19144063 19144199 -147506097 + RSINE1 SINE B4 16 159 -6 2 731 1059 266 149 11 chrX 19144225 19144688 -147505608 + L1MC1 LINE L1 5505 6031 -302 2 731 1278 278 29 23 chrX 19144695 19145174 -147505122 + L1MC2 LINE L1 5545 6026 -318 2 731 304 330 92 10 chrX 19145232 19145330 -147504966 + PB1D10 SINE Alu 5 110 -7 2 731 242 204 53 97 chrX 19145373 19145487 -147504809 + L1MC2 LINE L1 6096 6204 -140 2 731 668 241 98 10 chrX 19145509 19145714 -147504582 + ID_B1 SINE B4 2 224 0 2 731 2624 42 3 3 chrX 19145767 19146099 -147504197 + L1Md_F2 LINE L1 6251 6582 0 2 731 540 158 0 0 chrX 19146622 19146717 -147503579 + (TA)n Simple_repeat Simple_repeat 1 95 0 2 731 1247 79 11 0 chrX 19146717 19146894 -147503402 + L1_Mus2 LINE L1 6387 6565 -1 2 731 1101 261 60 30 chrX 19147480 19147777 -147502519 + L1MB5 LINE L1 5484 5801 -373 2 731 459 52 0 0 chrX 19147777 19147835 -147502461 + (TATAA)n Simple_repeat Simple_repeat 2 59 0 2 731 1101 279 244 26 chrX 19147835 19148145 -147502151 + L1MB5 LINE L1 5802 6166 -8 2 731 7497 72 0 5 chrX 19148230 19149698 -147500598 - L1Md_F2 LINE L1 -12 6570 5113 2 731 5635 64 0 0 chrX 19149697 19150417 -147499879 + L1Md_F2 LINE L1 4385 5104 -779 2 731 4988 42 2 0 chrX 19150445 19151047 -147499249 + L1Md_T LINE L1 5978 6580 -2 2 731 22 56 0 0 chrX 19151047 19151083 -147499213 + AT_rich Low_complexity Low_complexity 1 36 0 2 731 2837 250 30 37 chrX 19151083 19152189 -147498107 + L1_Rod LINE L1 3528 4604 -1243 2 731 297 308 18 55 chrX 19152200 19152310 -147497986 + B3 SINE B2 98 203 -13 2 731 367 318 9 9 chrX 19153166 19153274 -147497022 - PB1D10 SINE Alu 0 117 10 2 731 459 0 0 0 chrX 19154003 19154054 -147496242 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 731 426 20 0 0 chrX 19154209 19154260 -147496036 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 731 446 131 24 0 chrX 19154456 19154540 -147495756 + CT-rich Low_complexity Low_complexity 3 88 0 2 731 378 0 0 0 chrX 19154550 19154592 -147495704 + (TAAAA)n Simple_repeat Simple_repeat 2 43 0 2 731 3007 209 51 48 chrX 19154601 19154965 -147495331 - Lx6 LINE L1 -215 7245 6867 2 731 2634 130 149 34 chrX 19154965 19155490 -147494806 - RMER4B LTR ERVK 0 585 1 2 731 3007 209 51 48 chrX 19155490 19155793 -147494503 - Lx6 LINE L1 -594 6866 6576 2 731 406 224 122 0 chrX 19157859 19157957 -147492339 + ORR1D1 LTR MaLR 1 110 -264 2 731 873 114 0 0 chrX 19157957 19158089 -147492207 + (TC)n Simple_repeat Simple_repeat 1 132 0 2 731 458 195 50 66 chrX 19158089 19158210 -147492086 + ORR1D1 LTR MaLR 182 300 -74 2 731 299 228 46 65 chrX 19158296 19158404 -147491892 + Lx7 LINE L1 7417 7522 -174 2 731 387 296 80 42 chrX 19158632 19158654 -147491642 + CYRA11_Mm Unknown Y-chromosome 155 240 -377 2 731 984 101 50 0 chrX 19158654 19158813 -147491483 - URR1A DNA MER1_type -3 223 57 2 731 387 296 80 42 chrX 19158813 19158844 -147491452 + CYRA11_Mm Unknown Y-chromosome 241 374 -243 2 731 1592 112 0 24 chrX 19160083 19160331 -147489965 - L1Md_F2 LINE L1 -12 6570 6329 2 731 393 22 0 0 chrX 19160381 19160427 -147489869 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 731 225 83 0 0 chrX 19160538 19160574 -147489722 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2 731 639 294 38 19 chrX 19161090 19161469 -147488827 + Lx5 LINE L1 279 960 -6768 2 731 2670 159 59 42 chrX 19161896 19162734 -147487562 + Lx5 LINE L1 958 1788 -4092 2 731 3465 95 9 5 chrX 19162756 19163259 -147487037 - RLTR1C LTR ERV1 0 507 1 2 731 695 202 0 0 chrX 19163259 19163388 -147486908 + Lx5 LINE L1 1839 1967 -3913 2 731 1105 217 9 0 chrX 19163391 19163608 -147486688 + URR1B DNA MER1_type 1 219 -6 2 731 2178 210 6 122 chrX 19163614 19164318 -147485978 + Lx5 LINE L1 1962 2583 -3294 2 731 6103 151 76 9 chrX 19164345 19164936 -147485360 + Lx5 LINE L1 4631 5267 -610 2 731 2911 74 5 8 chrX 19164936 19165331 -147484965 + MTA_Mm LTR MaLR 1 394 -2 2 731 6103 151 76 9 chrX 19165331 19165822 -147484474 + Lx5 LINE L1 5268 5767 -110 2 731 2907 46 4 126 chrX 19165822 19166273 -147484023 + MTA_Mm LTR MaLR 1 396 0 2 731 6103 151 76 9 chrX 19166273 19166324 -147483972 + Lx5 LINE L1 5768 5840 -37 2 731 1680 179 31 22 chrX 19166324 19166644 -147483652 + ORR1B1 LTR MaLR 37 359 -35 2 731 1590 253 34 94 chrX 19166644 19167563 -147482733 + L1_Mus2 LINE L1 272 1077 -5561 2 731 733 230 37 0 chrX 19167563 19167724 -147482572 - RLTR9D LTR ERVK -13 390 224 2 731 13915 110 10 4 chrX 19167732 19170678 -147479618 + L1_Mus2 LINE L1 3559 6526 -40 2 731 353 148 60 36 chrX 19170678 19170779 -147479517 + ORR1B2 LTR MaLR 283 366 -18 2 731 1737 219 39 14 chrX 19170779 19171219 -147479077 + Lx5 LINE L1 5845 6295 -755 2 731 1269 139 76 11 chrX 19171218 19171480 -147478816 + L1_Mur3 LINE L1 4047 4325 -1555 2 731 2513 198 57 21 chrX 19171468 19171995 -147478301 + Lx6 LINE L1 6914 7459 -1 2 731 28 48 0 0 chrX 19172307 19172349 -147477947 + AT_rich Low_complexity Low_complexity 1 42 0 2 731 182 206 29 0 chrX 19172534 19172568 -147477728 - L4 LINE RTE -757 1272 1238 2 731 6030 153 9 2 chrX 19174702 19175795 -147474501 - L1_Mm LINE L1 -562 5321 4221 2 731 26711 110 21 4 chrX 19175795 19180586 -147469710 + L1_Mus1 LINE L1 559 5434 -449 2 731 5188 103 50 2 chrX 19180582 19181398 -147468898 + L1_Mus1 LINE L1 5710 6564 -3 2 731 268 354 36 86 chrX 19181870 19182009 -147468287 - MLT1I LTR MaLR -1 410 279 2 731 480 278 71 22 chrX 19182098 19182336 -147467960 + RLTR6-int LTR ERV1 4204 4546 -3232 2 731 1577 294 40 15 chrX 19182702 19183484 -147466812 + MuRRS4-int LTR ERV1 3533 4010 -1053 2 731 931 299 18 10 chrX 19183796 19184191 -147466105 + RLTR6-int LTR ERV1 7330 7727 -51 2 731 2061 98 201 8 chrX 19184275 19184654 -147465642 + RLTR47_MM LTR ERV1 1 452 -80 2 731 5405 119 18 19 chrX 19184663 19185551 -147464745 - Lx3B LINE L1 -223 6750 5864 2 731 317 261 0 0 chrX 19186484 19186553 -147463743 - ID4_ SINE ID -11 72 4 2 731 613 212 60 15 chrX 19186728 19186862 -147463434 - B1F SINE Alu -2 147 8 2 731 239 348 73 37 chrX 19187044 19187235 -147463061 - LTR78 LTR ERV1 -42 1262 1065 2 731 256 274 110 8 chrX 19187362 19187480 -147462816 + MER58B DNA MER1_type 31 160 -181 2 731 260 391 66 29 chrX 19187609 19187746 -147462550 + LTR16C LTR ERVL 126 267 -222 2 731 201 250 0 0 chrX 19187749 19187789 -147462507 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 731 353 301 54 0 chrX 19187789 19187882 -147462414 - B1F1 SINE Alu -51 98 1 2 731 260 350 89 48 chrX 19187933 19188101 -147462195 + LTR16C LTR ERVL 310 484 -5 2 731 17114 160 23 89 chrX 19188110 19192336 -147457960 - L1_Mus3 LINE L1 -12 6629 2884 2 731 244 0 56 0 chrX 19192336 19192372 -147457924 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 2 731 17114 171 26 98 chrX 19192372 19194101 -147456195 - L1_Mus3 LINE L1 -2997 2883 1031 2 731 1809 67 50 0 chrX 19194101 19194340 -147455956 - L1_Mus1 LINE L1 0 6567 6317 2 731 566 313 82 0 chrX 19194348 19194495 -147455801 - B3 SINE B2 -56 160 2 2 731 315 344 53 32 chrX 19194525 19194714 -147455582 - Lx8 LINE L1 -146 7327 7135 2 731 26 74 0 0 chrX 19194717 19194771 -147455525 + AT_rich Low_complexity Low_complexity 1 54 0 2 731 647 148 70 0 chrX 19195204 19195332 -147454964 - Lx6 LINE L1 -11 7449 7313 2 731 1167 82 0 0 chrX 19195363 19195509 -147454787 - B1_Mus2 SINE Alu -1 146 1 2 731 251 299 0 0 chrX 19195571 19195638 -147454658 - Lx6 LINE L1 -180 7280 7214 2 731 324 321 14 74 chrX 19196442 19196590 -147453706 - RMER4A LTR ERVK -303 163 25 2 731 203 125 0 24 chrX 19196732 19196773 -147453523 + (GGGAGA)n Simple_repeat Simple_repeat 4 43 0 2 731 2201 278 20 36 chrX 19196776 19197560 -147452736 - Lx9 LINE L1 -175 7469 6698 2 731 522 265 0 0 chrX 19197625 19197727 -147452569 - PB1D7 SINE Alu -7 113 12 2 731 274 313 12 14 chrX 19197656 19197767 -147452529 - B4A SINE B4 -125 167 58 2 731 275 238 195 8 chrX 19197797 19197920 -147452376 - L2a LINE L2 -3 3423 3278 2 731 180 0 0 0 chrX 19197958 19197978 -147452318 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 731 231 375 116 48 chrX 19198070 19198085 -147452211 - L2a LINE L2 -184 3242 3228 2 731 1295 185 112 30 chrX 19198085 19198217 -147452079 + RMER10B LTR ERVL 2 145 -253 2 731 732 23 0 0 chrX 19198217 19198303 -147451993 + (TC)n Simple_repeat Simple_repeat 1 86 0 2 731 1295 185 112 30 chrX 19198303 19198537 -147451759 + RMER10B LTR ERVL 146 397 -1 2 731 276 371 74 41 chrX 19198537 19198856 -147451440 - L2a LINE L2 -199 3227 2887 2 731 195 312 41 41 chrX 19199296 19199393 -147450903 + L2c LINE L2 3114 3210 -177 2 731 812 236 26 57 chrX 19200019 19200039 -147450257 - B4 SINE B4 0 292 273 2 731 285 29 0 0 chrX 19200039 19200073 -147450223 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 731 812 236 26 57 chrX 19200073 19200245 -147450051 - B4 SINE B4 -20 272 106 2 731 745 182 35 0 chrX 19200351 19200494 -147449802 - B1_Mus1 SINE Alu 0 148 1 2 731 201 326 0 0 chrX 19201232 19201278 -147449018 - L4 LINE RTE -199 1830 1785 2 731 458 17 17 0 chrX 19201396 19201455 -147448841 + (TAA)n Simple_repeat Simple_repeat 2 61 0 2 731 364 279 58 0 chrX 19201507 19201679 -147448617 + L1_Mur3 LINE L1 86 267 -7445 2 731 434 233 6 70 chrX 19201711 19201882 -147448414 + L1_Mur3 LINE L1 844 1003 -6709 2 731 2881 226 48 15 chrX 19201963 19202538 -147447758 + L1VL4 LINE L1 158 752 -5550 2 731 842 118 7 0 chrX 19202538 19202674 -147447622 + L1Md_F2 LINE L1 6434 6570 -12 2 731 3566 118 8 3 chrX 19202674 19203350 -147446946 + L1VL4 LINE L1 753 1436 -2123 2 731 2087 95 3 69 chrX 19203355 19203704 -147446592 - IAPLTR1a_Mm LTR ERVK -11 326 1 2 731 8251 35 10 0 chrX 19203704 19204730 -147445566 - IAPEz-int LTR ERVK 0 6481 5446 2 731 1684 5 0 0 chrX 19204729 19204922 -147445374 - IAPEz-int LTR ERVK -2764 3717 3525 2 731 876 73 24 0 chrX 19204922 19205045 -147445251 - IAPEz-int LTR ERVK -2770 4910 4785 2 731 1692 127 4 4 chrX 19205042 19205304 -147444992 - IAPEz-int LTR ERVK -5183 2497 2236 2 731 429 65 0 31 chrX 19205292 19205356 -147444940 - IAPEz-int LTR ERVK -5061 1420 1359 2 731 3211 56 4 62 chrX 19205356 19206139 -147444157 - IAPEz-int LTR ERVK -5819 662 1 2 731 2087 95 3 69 chrX 19206140 19206489 -147443807 - IAPLTR1a_Mm LTR ERVK -11 326 1 2 731 1191 96 0 0 chrX 19206489 19206666 -147443630 + L1_Mm LINE L1 1783 1959 -3924 2 731 7908 174 148 9 chrX 19206665 19208705 -147441591 + L1_Mur2 LINE L1 3464 5787 -90 2 731 2940 105 11 0 chrX 19208713 19209169 -147441127 - L1_Mus2 LINE L1 -906 4977 4517 2 731 6986 96 1 11 chrX 19209172 19210740 -147439556 + L1_Mus2 LINE L1 5019 6566 0 2 731 1729 89 14 22 chrX 19210735 19210954 -147439342 + L1_Mus2 LINE L1 5783 6005 -561 2 731 3357 70 43 11 chrX 19210954 19211414 -147438882 - MT2C_Mm LTR ERVL 0 475 1 2 731 1729 90 16 22 chrX 19211414 19211474 -147438822 + L1_Mus2 LINE L1 6006 6060 -578 2 731 638 116 16 8 chrX 19211474 19211596 -147438700 + L1_Mus3 LINE L1 6515 6637 -1 2 731 1704 110 29 26 chrX 19211596 19211623 -147438673 + L1_Mus2 LINE L1 6061 6091 -547 2 731 3236 50 3 0 chrX 19211925 19212309 -147437987 - IAPEY_LTR LTR ERVK 0 385 1 2 731 466 219 114 23 chrX 19212710 19212841 -147437455 - B1_Mur1 SINE Alu -1 148 6 2 731 1432 165 309 5 chrX 19212875 19213276 -147437020 + RLTR24 LTR ERV1 1 523 -6 3 731 973 268 47 14 chrX 19213350 19213748 -147436548 - L1MD LINE L1 -357 5822 5403 3 731 324 277 133 14 chrX 19213749 19213892 -147436404 - L1MD LINE L1 -800 5442 5283 3 731 21 36 0 0 chrX 19213940 19213968 -147436328 + AT_rich Low_complexity Low_complexity 1 28 0 3 731 1750 217 16 25 chrX 19214006 19214445 -147435851 - RCHARR1 DNA MER1_type -2 972 538 3 731 1128 287 36 7 chrX 19214518 19214795 -147435501 - B4 SINE B4 0 292 8 3 731 1017 204 32 0 chrX 19214799 19215015 -147435281 - RCHARR1 DNA MER1_type -476 498 276 3 731 479 225 151 50 chrX 19215039 19215198 -147435098 - RCHARR1 DNA MER1_type -798 176 2 3 731 476 280 111 72 chrX 19215240 19215671 -147434625 - L1MD LINE L1 -1213 4933 4486 3 731 5436 118 16 6 chrX 19215704 19216536 -147433760 - Lx3A LINE L1 -8 6973 6134 3 731 8079 22 2 0 chrX 19216698 19218174 -147432122 - L1Md_T LINE L1 -1 6581 5102 3 731 4316 15 0 8 chrX 19218172 19218697 -147431599 + L1Md_T LINE L1 4568 5088 -795 3 731 4540 96 26 37 chrX 19218694 19219721 -147430575 - Lx3A LINE L1 -837 6172 5158 3 731 1183 230 89 52 chrX 19219784 19220243 -147430053 + RMER3D-int LTR ERVK 2 477 -2365 3 731 362 189 31 47 chrX 19220315 19220443 -147429853 + RMER3D-int LTR ERVK 1025 1150 -1692 3 731 6166 192 56 55 chrX 19220452 19222472 -147427824 + RMER3D-int LTR ERVK 377 2841 -1 3 731 2106 201 26 7 chrX 19222498 19222918 -147427378 + RLTR17 LTR ERVK 46 473 -219 3 731 5357 103 55 0 chrX 19223051 19223840 -147426456 + L1_Mus4 LINE L1 5805 6636 0 3 731 261 0 0 0 chrX 19223980 19224009 -147426287 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 731 395 269 75 72 chrX 19224009 19224171 -147426125 - ID_B1 SINE B4 -74 218 63 3 731 6107 85 16 0 chrX 19224182 19225063 -147425233 - L1_Mus2 LINE L1 -1 6565 5671 3 731 8866 69 4 2 chrX 19225062 19226302 -147423994 - L1_Mus2 LINE L1 -672 5211 3970 3 731 357 109 0 0 chrX 19226338 19226393 -147423903 + (TTTA)n Simple_repeat Simple_repeat 4 58 0 3 731 1996 260 100 22 chrX 19226393 19227402 -147422894 - L1M2 LINE L1 -852 5291 4204 3 731 226 200 0 20 chrX 19227451 19227502 -147422794 - L1M2 LINE L1 -2032 4111 4062 3 731 311 227 52 0 chrX 19227513 19227610 -147422686 - Lx6 LINE L1 -11 7449 7348 3 731 491 149 33 0 chrX 19227757 19227878 -147422418 + (TA)n Simple_repeat Simple_repeat 1 125 0 3 731 2568 93 18 0 chrX 19227949 19228334 -147421962 + MusHAL1 LINE L1 1446 1837 -875 3 731 33805 35 0 0 chrX 19228410 19233794 -147416502 + L1Md_T LINE L1 109 5589 -297 3 731 9040 5 0 0 chrX 19233794 19234790 -147415506 + L1Md_T LINE L1 5590 6585 0 3 731 252 0 0 0 chrX 19234883 19234911 -147415385 + (A)n Simple_repeat Simple_repeat 1 28 0 3 731 551 317 12 6 chrX 19235100 19235126 -147415170 - MLT2D LTR ERVL -10 546 520 3 731 876 114 0 0 chrX 19235126 19235284 -147415012 + (TC)n Simple_repeat Simple_repeat 1 158 0 3 731 744 301 57 50 chrX 19235284 19235586 -147414710 - MLT2D LTR ERVL -37 519 79 3 731 1456 22 0 11 chrX 19236055 19236237 -147414059 + (TC)n Simple_repeat Simple_repeat 1 180 0 3 731 297 256 37 0 chrX 19236323 19236405 -147413891 - MLT2D LTR ERVL -469 87 3 3 731 311 325 83 5 chrX 19236421 19236625 -147413671 - L1M5 LINE L1 -438 5724 5505 3 731 21 57 0 0 chrX 19237145 19237180 -147413116 + AT_rich Low_complexity Low_complexity 1 35 0 3 731 414 274 0 36 chrX 19237464 19237574 -147412722 - PB1D10 SINE Alu -6 111 6 3 731 428 321 39 17 chrX 19237597 19237859 -147412437 - L1M5 LINE L1 -694 5479 5215 3 731 363 96 0 0 chrX 19237969 19238021 -147412275 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 3 731 596 202 28 0 chrX 19238021 19238130 -147412166 - B4A SINE B4 -73 219 108 3 731 194 91 30 0 chrX 19238196 19238229 -147412067 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 731 376 307 18 118 chrX 19238256 19238426 -147411870 - RSINE1 SINE B4 0 165 13 3 731 333 0 0 0 chrX 19238462 19238499 -147411797 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 731 417 39 0 0 chrX 19238499 19238549 -147411747 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 731 3012 20 42 3 chrX 19238813 19239166 -147411130 + IAPLTR1_Mm LTR ERVK 1 367 0 3 731 53317 20 13 5 chrX 19239166 19245588 -147404708 + IAPEz-int LTR ERVK 8 6481 0 3 731 3012 20 42 3 chrX 19245588 19245941 -147404355 + IAPLTR1_Mm LTR ERVK 1 367 0 3 731 3237 246 103 4 chrX 19246010 19246278 -147404018 - Lx8 LINE L1 -234 7239 6966 3 731 369 62 0 0 chrX 19246278 19246326 -147403970 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 731 3237 246 103 4 chrX 19246326 19246999 -147403297 - Lx8 LINE L1 -508 6965 6206 3 731 22 35 0 0 chrX 19248098 19248127 -147402169 + AT_rich Low_complexity Low_complexity 1 29 0 3 731 681 299 49 74 chrX 19248823 19249252 -147401044 + L1VL1 LINE L1 15 413 -6005 3 731 238 322 0 0 chrX 19249440 19249530 -147400766 + L1_Mus2 LINE L1 703 792 -5824 3 731 995 202 58 8 chrX 19249530 19249789 -147400507 + L1_Mus2 LINE L1 708 979 -5637 3 731 18292 133 11 12 chrX 19249791 19252912 -147397384 + L1_Mus2 LINE L1 2130 5234 -649 3 731 189 0 0 0 chrX 19252912 19252933 -147397363 + (TAGA)n Simple_repeat Simple_repeat 2 22 0 3 731 18292 172 10 68 chrX 19252933 19253060 -147397236 + L1_Mus2 LINE L1 5235 5372 -511 3 731 2413 60 63 0 chrX 19253060 19253377 -147396919 + ORR1A1 LTR MaLR 3 339 -7 3 731 13459 66 8 2 chrX 19253380 19255160 -147395136 + ORR1A1-int LTR MaLR 1 1792 0 3 731 2608 61 61 0 chrX 19255160 19255486 -147394810 + ORR1A1 LTR MaLR 1 346 0 3 731 15536 94 17 36 chrX 19255486 19256689 -147393607 + L1_Mus2 LINE L1 5376 6566 0 3 731 917 330 70 5 chrX 19257451 19257850 -147392446 + MER63B DNA AcHobo 11 435 -1 3 731 363 44 0 0 chrX 19258050 19258095 -147392201 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 3 731 353 323 11 0 chrX 19258167 19258260 -147392036 - RSINE1 SINE B4 -51 114 21 3 731 375 23 0 0 chrX 19258297 19258341 -147391955 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 731 272 222 56 0 chrX 19258354 19258408 -147391888 - tRNA-Ala-GCY_ tRNA tRNA -8 67 11 3 731 260 314 43 0 chrX 19258408 19258424 -147391872 - ID4 SINE ID -10 73 1 3 731 4650 109 54 13 chrX 19258779 19259556 -147390740 - RMER17D2 LTR ERVK 0 809 1 3 731 6975 55 2 11 chrX 19260095 19261031 -147389265 - L1Md_F2 LINE L1 -2 6580 5653 3 731 242 306 75 0 chrX 19261098 19261271 -147389025 - L1MD3 LINE L1 -1978 6017 5832 3 731 482 99 29 38 chrX 19261301 19261406 -147388890 + CT-rich Low_complexity Low_complexity 6 109 0 3 731 1001 22 7 22 chrX 19261406 19261545 -147388751 + (TTCTC)n Simple_repeat Simple_repeat 4 140 0 3 731 627 158 98 45 chrX 19261546 19261679 -147388617 - B1_Mur3 SINE Alu -9 140 1 3 731 259 325 31 13 chrX 19261699 19261858 -147388438 - L1MD3 LINE L1 -424 5818 5657 3 731 1651 239 52 115 chrX 19261849 19262617 -147387679 - L1M2 LINE L1 -1015 5128 4416 3 731 261 0 0 0 chrX 19262617 19262646 -147387650 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 3 731 1651 239 52 115 chrX 19262646 19262810 -147387486 - L1M2 LINE L1 -1728 4415 4254 3 731 633 270 5 53 chrX 19263092 19263299 -147386997 - B3A SINE B2 0 198 2 3 731 978 118 0 0 chrX 19264054 19264206 -147386090 + (TTC)n Simple_repeat Simple_repeat 2 153 0 3 731 306 172 14 72 chrX 19264210 19264279 -147386017 - HAL1-3A_ME LINE L1 -825 2033 1969 3 731 200 354 131 0 chrX 19264331 19264430 -147385866 - MIR SINE MIR -133 129 18 3 731 511 313 7 26 chrX 19265367 19265518 -147384778 + ID_B1 SINE B4 77 224 0 3 731 267 312 0 0 chrX 19265569 19265633 -147384663 - PB1D10 SINE Alu -21 96 33 3 731 537 350 105 15 chrX 19266603 19266870 -147383426 - LTR16A LTR ERVL -23 428 138 3 731 211 259 10 128 chrX 19266810 19266912 -147383384 + B1_Mur2 SINE Alu 60 149 0 3 731 715 129 0 15 chrX 19267039 19267173 -147383123 + (TTCC)n Simple_repeat Simple_repeat 2 133 0 3 732 1191 287 61 31 chrX 19268131 19268586 -147381710 - MLT1C LTR MaLR -2 625 4 3 732 347 322 43 11 chrX 19268667 19268761 -147381535 - B1F1 SINE Alu -52 97 1 3 732 297 238 70 0 chrX 19268767 19268876 -147381420 - MLT1A1 LTR MaLR -42 366 201 3 732 621 244 25 6 chrX 19269087 19269244 -147381052 + MLT1D LTR MaLR 89 248 -257 3 732 352 272 0 36 chrX 19269532 19269616 -147380680 + RSINE1 SINE B4 2 82 -83 3 732 361 338 45 5 chrX 19269878 19270077 -147380219 + L1M5 LINE L1 5377 5583 -596 3 732 1384 209 5 54 chrX 19270099 19270170 -147380126 - Lx3_Mus LINE L1 -1067 5942 5889 3 732 1497 97 0 0 chrX 19270170 19270377 -147379919 - L1_Mus2 LINE L1 -4 6562 6356 3 732 4207 103 23 1 chrX 19270377 19271030 -147379266 - Lx3_Mus LINE L1 -1121 5888 5221 3 732 5383 83 9 2 chrX 19271046 19271893 -147378403 + MERVL-int LTR ERVL 4632 5629 -132 3 732 363 125 26 53 chrX 19271893 19271969 -147378327 + ORR1A3-int LTR MaLR 567 640 -1323 3 732 302 0 0 0 chrX 19271969 19272007 -147378289 + MERVL-int LTR ERVL 5448 5485 0 3 732 2583 52 9 0 chrX 19272007 19272334 -147377962 + MT2C_Mm LTR ERVL 1 330 -145 3 732 1497 78 10 5 chrX 19272327 19272532 -147377764 + MTA_Mm LTR MaLR 190 395 -1 3 732 806 318 88 27 chrX 19272562 19273151 -147377145 + L1MC4a LINE L1 5425 6049 -1833 3 732 742 266 21 68 chrX 19273231 19273457 -147376839 + Lx9 LINE L1 7282 7503 -141 3 732 3528 25 0 0 chrX 19273457 19273853 -147376443 + MTA_Mm LTR MaLR 1 396 0 3 732 742 266 21 68 chrX 19273853 19274006 -147376290 + Lx9 LINE L1 7504 7642 -2 3 732 701 261 37 30 chrX 19274055 19274324 -147375972 + L1MC4a LINE L1 6189 6459 -1423 3 732 210 91 0 0 chrX 19274363 19274396 -147375900 + (CATTG)n Simple_repeat Simple_repeat 1 33 0 3 732 239 289 135 0 chrX 19274668 19274772 -147375524 + L1MC4a LINE L1 6466 6583 -1299 3 732 374 292 14 71 chrX 19274783 19274923 -147375373 + MT2B LTR ERVL 131 262 -339 3 732 701 198 0 0 chrX 19274827 19274948 -147375348 + B1_Mus1 SINE Alu 12 132 -16 3 732 300 211 0 0 chrX 19274953 19275024 -147375272 + GA-rich Low_complexity Low_complexity 2 72 0 3 732 366 80 0 0 chrX 19275026 19275076 -147375220 + (CAGA)n Simple_repeat Simple_repeat 2 51 0 3 732 252 0 0 0 chrX 19275076 19275104 -147375192 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 732 504 272 190 30 chrX 19275111 19275505 -147374791 + L1MC4a LINE L1 6657 7113 -769 3 732 719 343 49 16 chrX 19275543 19275908 -147374388 + Lx8 LINE L1 6829 7205 -268 3 732 286 185 12 12 chrX 19276104 19276186 -147374110 + (TA)n Simple_repeat Simple_repeat 2 83 0 3 732 585 258 33 49 chrX 19276223 19276468 -147373828 + L1MC4a LINE L1 7112 7352 -530 3 732 608 204 80 0 chrX 19276639 19276776 -147373520 + B1_Mur2 SINE Alu 2 149 0 3 732 252 0 0 0 chrX 19276776 19276804 -147373492 + (GAAA)n Simple_repeat Simple_repeat 4 31 0 3 732 729 88 0 0 chrX 19276804 19276906 -147373390 + (GGGA)n Simple_repeat Simple_repeat 4 105 0 3 732 285 167 0 0 chrX 19277186 19277246 -147373050 + L1MD3 LINE L1 7918 7977 -18 3 732 462 18 0 0 chrX 19277275 19277330 -147372966 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 732 2063 162 72 3 chrX 19277446 19277805 -147372491 + ORR1C2 LTR MaLR 1 384 0 3 732 1352 76 27 0 chrX 19280180 19280365 -147369931 - B2_Mm1t SINE B2 -2 191 2 3 732 290 365 0 45 chrX 19280583 19280715 -147369581 - MARNA DNA Mariner -410 176 51 3 732 300 209 0 0 chrX 19281007 19281074 -147369222 - Lx LINE L1 0 7696 7630 3 732 3087 161 25 16 chrX 19281079 19281641 -147368655 - Lx LINE L1 -3 6651 6085 3 732 748 334 148 20 chrX 19281884 19282229 -147368067 + LTR16A LTR ERVL 5 393 -58 3 732 588 159 0 0 chrX 19282473 19282561 -147367735 + B2_Mm2 SINE B2 1 88 -107 3 732 432 0 0 0 chrX 19282564 19282612 -147367684 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 3 732 710 257 47 33 chrX 19283569 19283782 -147366514 - B3 SINE B2 0 216 1 3 732 4003 52 4 2 chrX 19283993 19284493 -147365803 + L1_Mus2 LINE L1 6062 6562 -4 4 732 1154 62 7 0 chrX 19284753 19284898 -147365398 + B1_Mus2 SINE Alu 2 147 0 4 732 328 56 18 36 chrX 19284898 19284954 -147365342 + (GAAA)n Simple_repeat Simple_repeat 4 58 0 4 732 1207 257 19 23 chrX 19285141 19285522 -147364774 - Lx9 LINE L1 -594 7050 6600 4 732 813 331 47 8 chrX 19285518 19286005 -147364291 + Lx9 LINE L1 7094 7599 -45 4 732 27 0 0 0 chrX 19286042 19286069 -147364227 + AT_rich Low_complexity Low_complexity 1 27 0 4 732 14462 128 11 37 chrX 19286235 19289360 -147360936 + L1_Mus1 LINE L1 725 3761 -2122 4 732 4298 81 17 1 chrX 19289352 19290246 -147360050 + L1_Mus1 LINE L1 5236 6143 -424 4 732 2178 74 0 0 chrX 19290246 19290530 -147359766 + L1_Mus1 LINE L1 6284 6567 0 4 732 288 318 57 69 chrX 19290779 19290839 -147359457 + ID SINE ID 32 89 -135 4 732 490 244 96 0 chrX 19290839 19290949 -147359347 + B1_Mur2 SINE Alu 1 121 -28 4 732 662 232 161 57 chrX 19290949 19291325 -147358971 + MT2B LTR ERVL 1 361 -240 4 732 1930 183 0 52 chrX 19291325 19291711 -147358585 - Lx LINE L1 0 6654 6289 4 732 919 183 16 158 chrX 19291711 19291851 -147358445 + MT2B LTR ERVL 385 497 -104 4 732 4061 63 0 8 chrX 19291851 19292376 -147357920 - L1Md_F2 LINE L1 0 6582 6062 4 732 919 183 16 158 chrX 19292376 19292488 -147357808 + MT2B LTR ERVL 498 601 0 4 732 442 274 86 32 chrX 19292831 19293110 -147357186 - L1MB8 LINE L1 -5 6173 5880 4 732 384 293 35 35 chrX 19293443 19293613 -147356683 - RLTR42-int LTR ERVK -4122 1400 1231 4 732 6762 87 24 17 chrX 19293919 19295270 -147355026 - L1_Mus3 LINE L1 -6 6632 5270 4 732 3494 181 70 10 chrX 19295262 19295333 -147354963 - L1_Mur3 LINE L1 -3727 2153 2083 4 732 444 77 0 0 chrX 19295333 19295398 -147354898 + (TGG)n Simple_repeat Simple_repeat 1 65 0 4 732 3494 186 64 42 chrX 19295398 19296579 -147353717 - L1_Mur3 LINE L1 -3798 2082 892 4 732 1885 154 26 81 chrX 19296946 19297327 -147352969 + ORR1B1 LTR MaLR 35 394 0 4 732 585 287 101 27 chrX 19297390 19297755 -147352541 - L1M4 LINE L1 -1194 4952 4561 4 732 261 304 137 21 chrX 19297767 19297909 -147352387 - ORR1E LTR MaLR -8 371 206 4 732 316 359 17 8 chrX 19297939 19298057 -147352239 - ORR1E LTR MaLR -211 148 30 4 732 303 341 91 45 chrX 19298295 19298427 -147351869 - RSINE1 SINE B4 -16 149 12 4 732 300 289 144 0 chrX 19298430 19298527 -147351769 - L1M4 LINE L1 -1727 4419 4309 4 732 237 274 16 0 chrX 19298541 19298603 -147351693 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 4 732 960 304 67 8 chrX 19298605 19298873 -147351423 - B4A SINE B4 -7 285 2 4 732 496 242 105 45 chrX 19298903 19299183 -147351113 - L1M4 LINE L1 -1852 4294 3992 4 732 402 21 0 0 chrX 19299232 19299279 -147351017 + (CATA)n Simple_repeat Simple_repeat 4 50 0 4 732 287 319 0 0 chrX 19299281 19299353 -147350943 + MER21B LTR ERV1 23 94 -769 4 732 2202 299 48 46 chrX 19299351 19300045 -147350251 + MER21B LTR ERV1 43 737 -126 4 732 404 220 86 40 chrX 19300153 19300328 -147349968 - L1M4 LINE L1 -2167 3979 3797 4 732 6923 122 56 13 chrX 19300331 19301906 -147348390 - Lx LINE L1 0 6654 5071 4 732 4157 80 16 4 chrX 19301906 19302461 -147347835 + L1_Mus2 LINE L1 6005 6566 0 4 732 5159 164 142 2 chrX 19302461 19302538 -147347758 - Lx LINE L1 -807 5070 4850 4 732 189 0 0 0 chrX 19302538 19302559 -147347737 + (CCA)n Simple_repeat Simple_repeat 3 23 0 4 732 5159 164 142 2 chrX 19302559 19302829 -147347467 - Lx LINE L1 -1028 4849 4573 4 732 2447 153 37 15 chrX 19302824 19303507 -147346789 + L1_Mur2 LINE L1 1586 2322 -3555 4 732 16373 170 24 7 chrX 19304150 19305272 -147345024 - L1VL2 LINE L1 -1273 4610 3499 4 732 7412 86 14 16 chrX 19305272 19306295 -147344001 + RLTR13D5 LTR ERVK 3 1023 0 4 732 16373 156 25 29 chrX 19306295 19309162 -147341134 - L1VL2 LINE L1 -2385 3498 611 4 732 459 0 0 0 chrX 19309176 19309227 -147341069 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 732 305 191 27 153 chrX 19309240 19309351 -147340945 - L1MC LINE L1 -2397 3749 3653 4 732 1034 286 37 154 chrX 19309351 19309515 -147340781 - MTEa LTR MaLR 0 379 206 4 732 528 266 69 7 chrX 19309515 19309659 -147340637 + RSINE1 SINE B4 4 156 -9 4 732 1034 286 37 154 chrX 19309659 19309868 -147340428 - MTEa LTR MaLR -174 205 49 4 732 388 35 17 17 chrX 19309868 19309927 -147340369 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 4 732 1190 36 0 0 chrX 19309931 19310068 -147340228 - B1_Mus1 SINE Alu -11 137 1 4 732 1034 286 37 154 chrX 19310068 19310117 -147340179 - MTEa LTR MaLR -331 48 1 4 732 655 283 124 6 chrX 19310159 19310681 -147339615 - L1M4 LINE L1 -2490 3656 3073 4 732 500 0 17 0 chrX 19310701 19310761 -147339535 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 732 243 222 0 149 chrX 19310765 19310839 -147339457 - ID4 SINE ID -19 64 2 4 732 5233 60 7 1 chrX 19311517 19312608 -147337688 + L1VL1 LINE L1 413 1509 -2189 4 732 243 217 14 28 chrX 19312820 19312891 -147337405 + L1MEc LINE L1 314 383 -6017 4 732 414 300 58 0 chrX 19313087 19313207 -147337089 + MER54A LTR ERVL 556 682 -219 4 732 714 154 0 0 chrX 19313576 19313693 -147336603 - L1_Mus3 LINE L1 -225 5658 5542 4 732 6417 103 8 5 chrX 19313690 19314658 -147335638 + L1_Mus3 LINE L1 5666 6636 -2 4 732 287 265 23 32 chrX 19315473 19315568 -147334728 + PB1D10 SINE Alu 2 102 -47 4 732 318 272 103 17 chrX 19315878 19315994 -147334302 + RSINE1 SINE B4 2 127 -38 4 732 485 232 0 20 chrX 19316298 19316399 -147333897 - PB1D10 SINE Alu -1 116 18 4 732 350 304 0 31 chrX 19316447 19316576 -147333720 + LTR33 LTR ERVL 390 514 -1 4 732 205 324 0 40 chrX 19316576 19316650 -147333646 - MIR3 SINE MIR -124 84 14 4 732 378 301 31 37 chrX 19316829 19316991 -147333305 - MER121 Unknown Unknown -160 252 92 4 732 25733 137 12 5 chrX 19317000 19323226 -147327070 + L1_Mus3 LINE L1 361 6633 -5 4 732 1223 240 112 76 chrX 19323448 19323798 -147326498 + MTEa LTR MaLR 1 369 -1 4 732 1153 289 54 28 chrX 19324547 19325163 -147325133 - L1MC4a LINE L1 -40 7842 7211 4 732 271 260 13 0 chrX 19325181 19325258 -147325038 - MTEb LTR MaLR -2 377 300 4 732 337 156 88 29 chrX 19325293 19325426 -147324870 - L1MC4a LINE L1 -871 7171 7008 4 732 31960 92 7 5 chrX 19325422 19331543 -147318753 - L1_Mus1 LINE L1 -1 6566 446 4 732 228 281 0 0 chrX 19331586 19331650 -147318646 + L1M4 LINE L1 3613 3676 -2470 4 732 1164 56 14 0 chrX 19331650 19331794 -147318502 + B1_Mm SINE Alu 2 147 0 4 732 302 0 26 0 chrX 19331803 19331841 -147318455 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 732 370 281 61 134 chrX 19331924 19332115 -147318181 + L1M4 LINE L1 3820 3990 -2150 4 732 551 298 62 68 chrX 19332115 19332407 -147317889 + B4A SINE B4 3 292 0 4 732 587 253 94 47 chrX 19332407 19332676 -147317620 + L1M4 LINE L1 3991 4252 -1894 4 732 242 254 0 17 chrX 19332676 19332736 -147317560 + (TG)n Simple_repeat Simple_repeat 1 59 0 4 732 358 262 72 78 chrX 19332759 19332912 -147317384 + L1M4 LINE L1 4223 4374 -1772 4 732 939 206 15 76 chrX 19333340 19333682 -147316614 + Lx5 LINE L1 891 1222 -6506 4 732 4438 192 60 8 chrX 19333679 19334180 -147316116 + Lx5 LINE L1 5693 6219 -831 4 732 453 19 0 0 chrX 19334180 19334234 -147316062 + (TTAGGG)n Simple_repeat Simple_repeat 3 56 0 4 732 4438 192 60 8 chrX 19334234 19334722 -147315574 + Lx5 LINE L1 6220 6731 -319 4 732 1013 230 5 0 chrX 19334718 19334927 -147315369 - Lx5 LINE L1 -694 6356 6147 4 732 1013 227 118 36 chrX 19334930 19335209 -147315087 + Lx5 LINE L1 6746 7047 -3 4 732 219 339 0 0 chrX 19335218 19335274 -147315022 + PB1D10 SINE Alu 53 108 -9 4 732 189 171 0 0 chrX 19335275 19335310 -147314986 + (CCA)n Simple_repeat Simple_repeat 1 35 0 4 732 439 305 47 35 chrX 19335476 19335592 -147314704 - B4 SINE B4 -117 175 56 4 732 4861 77 5 1 chrX 19335592 19336241 -147314055 - L1_Mus3 LINE L1 0 6638 5988 4 732 439 305 47 35 chrX 19336241 19336294 -147314002 - B4 SINE B4 -237 55 4 4 732 341 70 0 17 chrX 19336518 19336576 -147313720 + (TTTTG)n Simple_repeat Simple_repeat 4 60 0 4 732 328 251 38 87 chrX 19336576 19336842 -147313454 - L1MEc LINE L1 -4640 1775 1475 4 732 328 291 9 0 chrX 19336844 19336954 -147313342 + L1M4 LINE L1 4582 4692 -1454 4 732 666 293 91 57 chrX 19337346 19337751 -147312545 - L1MA4 LINE L1 -361 5939 5521 4 732 6889 58 3 13 chrX 19338023 19338962 -147311334 - L1Md_F2 LINE L1 -14 6568 5639 4 732 5317 86 14 20 chrX 19338963 19339793 -147310503 - L1_Mm LINE L1 -2812 3071 2247 4 732 905 56 0 0 chrX 19339793 19339900 -147310396 - U6 snRNA snRNA 0 107 1 4 732 536 270 75 29 chrX 19340854 19341094 -147309202 + RMER15 LTR ERVL 325 575 0 4 732 636 137 177 46 chrX 19341492 19341622 -147308674 - B1_Mus2 SINE Alu 0 147 1 4 732 22 35 0 0 chrX 19341641 19341670 -147308626 + AT_rich Low_complexity Low_complexity 1 29 0 4 732 182 283 0 0 chrX 19341677 19341723 -147308573 + L2 LINE L2 2239 2284 -1135 4 732 1062 241 39 7 chrX 19341906 19342190 -147308106 - MER119 DNA MER1_type -43 540 248 4 732 232 151 37 19 chrX 19342191 19342245 -147308051 + T-rich Low_complexity Low_complexity 3 57 0 4 732 402 296 73 15 chrX 19342781 19342918 -147307378 + RSINE1 SINE B4 4 148 -17 4 732 1254 203 29 40 chrX 19343648 19343925 -147306371 + RLTR46 LTR ERVK 42 315 -5 4 732 377 346 55 36 chrX 19343960 19344125 -147306171 - MLT1A0 LTR MaLR -60 305 138 4 732 369 356 38 55 chrX 19344116 19344226 -147306070 - MT2A LTR ERVL -4 529 416 4 732 3861 46 17 0 chrX 19344226 19344702 -147305594 + L1Md_F2 LINE L1 6099 6582 0 4 732 369 356 38 55 chrX 19344702 19344882 -147305414 - MT2A LTR ERVL -118 415 244 4 732 336 282 60 60 chrX 19344847 19344998 -147305298 + MLT1A0 LTR MaLR 215 365 0 4 732 846 213 75 162 chrX 19345506 19345826 -147304470 + MT2A LTR ERVL 1 292 -241 4 732 293 260 0 9 chrX 19345827 19345932 -147304364 + (TA)n Simple_repeat Simple_repeat 2 105 0 4 732 28569 124 15 9 chrX 19346597 19352398 -147297898 + L1Md_T LINE L1 245 6098 -484 4 732 331 68 0 0 chrX 19352396 19352440 -147297856 + L1Md_T LINE L1 6392 6435 -131 4 732 1269 261 38 11 chrX 19352440 19352727 -147297569 - MTEa LTR MaLR -67 312 18 4 732 224 54 54 0 chrX 19354181 19354218 -147296078 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 732 8329 77 11 6 chrX 19354231 19356124 -147294172 - L1Md_F2 LINE L1 -7 6575 4670 4 732 35851 32 1 0 chrX 19356120 19361379 -147288917 - L1Md_A LINE L1 0 6582 1317 4 732 20554 83 8 6 chrX 19361377 19362184 -147288112 - L1Md_F2 LINE L1 -1589 4294 3478 4 732 270 0 0 0 chrX 19362184 19362214 -147288082 + (TTG)n Simple_repeat Simple_repeat 1 30 0 4 732 20554 108 12 12 chrX 19362214 19365280 -147285016 - L1Md_F2 LINE L1 -2406 3477 419 4 732 891 276 40 0 chrX 19365465 19365664 -147284632 - B3 SINE B2 0 216 10 4 732 489 269 58 22 chrX 19365977 19366114 -147284182 + RSINE1 SINE B4 5 146 -19 4 732 594 70 9 0 chrX 19366256 19366355 -147283941 + ORR1A1 LTR MaLR 1 103 -226 4 732 310 336 34 0 chrX 19367567 19367686 -147282610 - B1F SINE Alu -7 142 20 4 732 262 121 15 15 chrX 19367951 19368018 -147282278 + (TTTG)n Simple_repeat Simple_repeat 1 67 0 4 732 261 319 26 0 chrX 19368084 19368197 -147282099 - PB1D10 SINE Alu 0 117 2 4 732 546 230 7 67 chrX 19368221 19368370 -147281926 - B1_Mur1 SINE Alu -8 141 2 4 732 2108 111 6 84 chrX 19369146 19369501 -147280795 + ORR1A2 LTR MaLR 1 327 0 4 732 259 82 40 27 chrX 19369858 19369933 -147280363 + (TTTG)n Simple_repeat Simple_repeat 1 76 0 5 732 1133 90 0 0 chrX 19369934 19370079 -147280217 - B1_Mm SINE Alu -2 145 1 5 732 664 147 0 14 chrX 19370110 19370248 -147280048 + (TG)n Simple_repeat Simple_repeat 1 136 0 5 732 1057 242 68 53 chrX 19370248 19370647 -147279649 - MT2B LTR ERVL -52 549 98 5 732 341 174 50 10 chrX 19370703 19370802 -147279494 - MERVL_2A-int LTR ERVL -40 5721 5619 5 732 695 177 14 0 chrX 19370800 19370941 -147279355 - MERVL_2A-int LTR ERVL -71 5690 5548 5 732 3073 168 145 29 chrX 19370932 19371596 -147278700 - MERVL_2A-int LTR ERVL -3510 2251 1511 5 732 2745 182 111 12 chrX 19371599 19372193 -147278103 + MTC-int LTR MaLR 4 656 -602 5 732 1871 156 45 18 chrX 19372185 19372519 -147277777 + MTC LTR MaLR 5 347 -74 5 732 4138 208 42 35 chrX 19372529 19373427 -147276869 - RMER13B LTR ERVK -3 905 1 5 732 290 221 14 14 chrX 19373427 19373496 -147276800 + MTC LTR MaLR 342 410 -11 5 732 7638 18 1 0 chrX 19374087 19375019 -147275277 - L1Md_A LINE L1 -987 4896 3964 5 732 5858 14 0 0 chrX 19375017 19375715 -147274581 + L1Md_A LINE L1 4889 5586 -297 5 732 8434 34 0 0 chrX 19375715 19376711 -147273585 + L1Md_A LINE L1 5587 6582 0 5 732 935 216 24 5 chrX 19377007 19377216 -147273080 + B3 SINE B2 4 216 0 5 732 416 338 20 7 chrX 19377798 19377950 -147272346 - MER58A DNA MER1_type -11 213 60 5 732 351 285 43 79 chrX 19378675 19378839 -147271457 - RLTR14 LTR ERV1 0 382 225 5 732 261 0 0 0 chrX 19379251 19379280 -147271016 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 732 405 0 0 0 chrX 19379548 19379593 -147270703 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 732 954 8 24 0 chrX 19379593 19379715 -147270581 + (TG)n Simple_repeat Simple_repeat 1 126 0 5 732 342 328 123 62 chrX 19379719 19380195 -147270101 - MER34 LTR ERV1 -37 505 1 5 732 821 279 75 17 chrX 19380356 19380651 -147269645 - Lx8 LINE L1 -1044 6429 6118 5 732 5595 168 83 17 chrX 19380690 19382023 -147268273 + L1_Mur3 LINE L1 4350 5770 -110 5 732 221 323 98 52 chrX 19382040 19382213 -147268083 + L3 LINE CR1 3577 3757 -732 5 732 1317 310 77 70 chrX 19382461 19383749 -147266547 + L1MA4 LINE L1 2202 3509 -2634 5 732 465 19 0 0 chrX 19383749 19383803 -147266493 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 732 1317 310 77 70 chrX 19383803 19384147 -147266149 + L1MA4 LINE L1 3510 3845 -2298 5 732 2901 6 0 0 chrX 19384185 19384523 -147265773 + L1Md_A LINE L1 5249 5586 -297 5 732 9033 2 0 0 chrX 19384523 19385514 -147264782 + L1Md_A LINE L1 5587 6577 -5 5 732 2344 267 56 20 chrX 19385521 19386485 -147263811 + L1MA4 LINE L1 3865 4863 -1280 5 732 1220 228 19 6 chrX 19386533 19386893 -147263403 + MTD LTR MaLR 1 411 -8 5 732 1221 244 55 101 chrX 19386896 19387261 -147263035 - MTE2b LTR MaLR -31 348 1 5 732 318 256 369 29 chrX 19387323 19387564 -147262732 + L1MA4 LINE L1 4978 5300 -843 5 732 601 244 272 13 chrX 19387572 19387800 -147262496 + B4A SINE B4 4 290 -2 5 732 635 0 13 0 chrX 19387843 19387918 -147262378 + (CA)n Simple_repeat Simple_repeat 1 76 0 5 732 445 245 11 34 chrX 19387924 19388121 -147262175 + L1M5 LINE L1 5312 5496 -682 5 732 365 280 99 10 chrX 19388157 19388258 -147262038 + B1_Mur1 SINE Alu 40 149 0 5 732 254 29 29 0 chrX 19388258 19388293 -147262003 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 5 732 700 220 15 0 chrX 19388297 19388429 -147261867 + B1_Mus2 SINE Alu 2 135 -12 5 732 219 125 0 0 chrX 19388431 19388471 -147261825 + (TC)n Simple_repeat Simple_repeat 1 40 0 5 732 630 237 38 70 chrX 19388499 19388685 -147261611 + B3A SINE B2 2 181 -17 5 732 1199 267 34 16 chrX 19388730 19389171 -147261125 + L1MA4 LINE L1 5478 5926 -374 5 732 363 23 0 0 chrX 19389183 19389227 -147261069 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 732 297 269 43 11 chrX 19391238 19391332 -147258964 - RMER10A LTR ERVL -28 414 318 5 732 1221 48 0 0 chrX 19391513 19391659 -147258637 + B1_Mus2 SINE Alu 2 147 0 5 732 225 0 0 0 chrX 19391659 19391684 -147258612 + (A)n Simple_repeat Simple_repeat 1 25 0 5 732 3351 157 51 12 chrX 19391987 19392579 -147257717 + Lx LINE L1 6038 6652 -2 5 732 216 0 0 0 chrX 19393536 19393560 -147256736 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 5 732 1915 290 68 19 chrX 19393740 19394432 -147255864 + Lx8 LINE L1 6745 7470 -3 5 732 235 240 62 0 chrX 19394830 19394926 -147255370 + L1M4 LINE L1 2512 2613 -3533 5 732 304 293 75 48 chrX 19394976 19395123 -147255173 + L1M4 LINE L1 2627 2777 -3369 5 732 614 303 80 42 chrX 19395128 19395366 -147254930 + MER2 DNA MER2_type 98 344 -1 5 732 185 273 18 18 chrX 19395531 19395587 -147254709 - MIR SINE MIR -6 256 201 5 732 757 172 221 5 chrX 19395689 19395888 -147254408 - Lx5 LINE L1 -4 7046 6805 5 732 294 95 0 0 chrX 19395900 19395942 -147254354 + (TCTG)n Simple_repeat Simple_repeat 2 43 0 5 732 570 133 0 0 chrX 19396609 19396722 -147253574 + (TAGA)n Simple_repeat Simple_repeat 4 116 0 5 732 466 320 23 11 chrX 19397792 19397969 -147252327 - B3A SINE B2 -15 183 5 5 733 196 239 0 118 chrX 19398839 19398915 -147251381 + L3 LINE CR1 4238 4304 -185 5 733 5140 167 35 6 chrX 19398928 19399809 -147250487 - RMER13B LTR ERVK -1 907 1 5 733 451 328 131 31 chrX 19400449 19400844 -147249452 + MLT1C LTR MaLR 3 459 -46 5 733 319 373 8 0 chrX 19400896 19401014 -147249282 - L3 LINE CR1 -1 4488 4370 5 733 324 217 39 178 chrX 19401920 19402049 -147248247 + L1VL1 LINE L1 16 126 -6296 5 733 460 259 14 7 chrX 19402157 19402297 -147247999 + L1_Mus2 LINE L1 663 803 -5813 5 733 28061 111 5 3 chrX 19402305 19407221 -147243075 + L1_Mus2 LINE L1 725 5650 -916 5 733 719 128 7 0 chrX 19407227 19407368 -147242928 + (GGA)n Simple_repeat Simple_repeat 3 144 0 5 733 232 186 17 0 chrX 19407370 19407429 -147242867 + GA-rich Low_complexity Low_complexity 2 61 0 5 733 1035 54 0 0 chrX 19407429 19407559 -147242737 + B1_Mm SINE Alu 17 146 -1 5 733 215 163 20 0 chrX 19407559 19407608 -147242688 + (CAAA)n Simple_repeat Simple_repeat 1 50 0 5 733 33797 36 1 0 chrX 19408166 19414229 -147236067 + L1Md_T LINE L1 1 5589 -297 5 733 8919 9 0 3 chrX 19414229 19415228 -147235068 + L1Md_T LINE L1 5590 6585 0 5 733 1081 64 0 28 chrX 19416821 19416966 -147233330 + B1_Mus1 SINE Alu 3 143 -5 5 733 4092 212 75 58 chrX 19416968 19418361 -147231935 - RMER1A Other Other -15 1015 1 5 733 1087 279 46 0 chrX 19418360 19418665 -147231631 - RMER1B Other Other -747 319 1 5 733 233 271 29 0 chrX 19418943 19419013 -147231283 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 733 702 262 125 32 chrX 19419021 19419269 -147231027 - B4A SINE B4 -18 274 4 5 733 2222 159 32 50 chrX 19419613 19419916 -147230380 + ORR1C1-int LTR MaLR 1075 1372 -137 5 733 6116 50 1 12 chrX 19419916 19420693 -147229603 + L1Md_F2 LINE L1 5813 6581 -1 5 733 2222 159 32 50 chrX 19420693 19420832 -147229464 + ORR1C1-int LTR MaLR 1373 1509 0 5 733 661 185 190 6 chrX 19420832 19420990 -147229306 + ORR1C1 LTR MaLR 1 187 -191 5 733 687 184 0 0 chrX 19420990 19421131 -147229165 + CT-rich Low_complexity Low_complexity 1 141 0 5 733 525 245 129 47 chrX 19421133 19421326 -147228970 + ORR1C1 LTR MaLR 166 374 -4 5 733 3320 48 2 0 chrX 19421489 19421884 -147228412 + MTA_Mm LTR MaLR 1 396 0 5 733 22 0 0 0 chrX 19421891 19421913 -147228383 + AT_rich Low_complexity Low_complexity 1 22 0 5 733 2652 69 46 0 chrX 19422288 19422637 -147227659 - L1_Mus2 LINE L1 0 6566 6202 5 733 1331 265 76 25 chrX 19422816 19423172 -147227124 - MTEa LTR MaLR -5 374 1 5 733 248 194 219 14 chrX 19423412 19423485 -147226811 + RMER21B LTR ERV1 480 567 -275 5 733 620 241 20 7 chrX 19423628 19423774 -147226522 + RodERV21-int LTR ERV1 127 274 -4717 5 733 27936 110 8 8 chrX 19423834 19427058 -147223238 - L1_Mus2 LINE L1 -1 6565 3344 5 733 261 0 0 0 chrX 19427058 19427087 -147223209 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 733 27936 119 7 9 chrX 19427087 19428891 -147221405 - L1_Mus2 LINE L1 -2540 3343 1555 5 733 399 41 0 0 chrX 19428891 19428940 -147221356 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 733 27936 98 28 6 chrX 19428940 19430241 -147220055 - L1_Mus2 LINE L1 -4329 1554 217 5 733 4379 252 93 60 chrX 19430318 19431508 -147218788 + RodERV21-int LTR ERV1 517 1736 -3255 5 733 4907 54 3 13 chrX 19431508 19432142 -147218154 - L1Md_F2 LINE L1 0 6582 5955 5 733 4379 252 93 60 chrX 19432142 19432463 -147217833 + RodERV21-int LTR ERV1 1737 2079 -2912 5 733 468 0 0 0 chrX 19432763 19432815 -147217481 + (TC)n Simple_repeat Simple_repeat 2 53 0 5 733 264 245 52 45 chrX 19433051 19433205 -147217091 + MER34-int LTR ERV1 4681 4835 -3372 5 733 923 302 58 35 chrX 19434199 19434423 -147215873 + L1_Mur3 LINE L1 121 343 -7385 5 733 624 27 0 0 chrX 19434423 19434497 -147215799 + (TC)n Simple_repeat Simple_repeat 1 74 0 5 733 923 305 62 33 chrX 19434497 19434890 -147215406 + L1_Mur3 LINE L1 102 681 -7047 5 733 7271 174 36 21 chrX 19434890 19436563 -147213733 + L1_Mur3 LINE L1 1496 3193 -2687 5 733 513 159 50 21 chrX 19436984 19437125 -147213171 + L1_Mur3 LINE L1 3189 3333 -2547 5 733 35223 29 0 9 chrX 19437128 19442212 -147208084 + L1Md_A LINE L1 556 5586 -297 5 733 8283 39 1 0 chrX 19442212 19443207 -147207089 + L1Md_A LINE L1 5587 6582 0 5 733 532 168 124 14 chrX 19443207 19443352 -147206944 + L1_Mur3 LINE L1 3324 3484 -2396 5 733 3768 143 47 3 chrX 19443346 19443989 -147206307 + L1_Mm LINE L1 5189 5859 -24 5 733 2201 176 29 8 chrX 19444001 19444385 -147205911 + Lx LINE L1 6256 6647 -7 5 733 582 190 0 0 chrX 19444385 19444501 -147205795 + GA-rich Low_complexity Low_complexity 1 116 0 5 733 7644 175 82 1 chrX 19444503 19446011 -147204285 + L1_Mur3 LINE L1 3445 5071 -809 5 733 3221 218 99 39 chrX 19446010 19447085 -147203211 + Lx6 LINE L1 6318 7457 -3 5 733 4564 88 0 4 chrX 19447089 19447787 -147202509 + L1Md_F2 LINE L1 5252 5946 -636 5 733 25 0 0 0 chrX 19448200 19448225 -147202071 + AT_rich Low_complexity Low_complexity 1 25 0 5 733 4415 112 25 28 chrX 19448225 19448877 -147201419 + L1Md_F2 LINE L1 5933 6582 0 5 733 238 235 0 19 chrX 19448912 19448964 -147201332 + LSU-rRNA_Hsa rRNA rRNA 4202 4252 -783 5 733 5435 128 95 98 chrX 19448964 19450092 -147200204 - RMER17C-int LTR ERVK -706 2532 1409 5 733 2598 176 152 36 chrX 19450566 19451179 -147199117 - RMER17C-int LTR ERVK -2554 684 1 5 733 645 180 16 8 chrX 19451180 19451303 -147198993 - RMER17C LTR ERVK 0 410 287 5 733 483 259 30 37 chrX 19451549 19451713 -147198583 + RNLTR23 LTR ERVK 480 642 0 5 733 1399 214 16 13 chrX 19451713 19452020 -147198276 - RMER17C LTR ERVK -102 308 1 5 733 216 0 0 0 chrX 19452371 19452395 -147197901 + (T)n Simple_repeat Simple_repeat 1 24 0 5 733 453 329 49 14 chrX 19453484 19453505 -147196791 + RSINE1 SINE B4 19 39 -126 5 733 2455 144 14 3 chrX 19453505 19453868 -147196428 - ORR1B2 LTR MaLR 0 367 1 5 733 453 329 49 14 chrX 19453868 19453988 -147196308 + RSINE1 SINE B4 40 164 -1 5 733 425 243 39 0 chrX 19454023 19454126 -147196170 - MER2 DNA MER2_type -82 263 157 5 733 1084 267 134 35 chrX 19454124 19454524 -147195772 + MT2B LTR ERVL 35 601 0 5 733 1097 176 104 5 chrX 19454525 19454747 -147195549 + MERVL_2A-int LTR ERVL 2 245 -5516 5 733 1620 166 0 11 chrX 19454747 19455015 -147195281 - ORR1B1 LTR MaLR 0 394 130 5 733 4959 56 5 2 chrX 19455015 19455627 -147194669 + L1Md_F2 LINE L1 5738 6351 -231 5 733 6973 63 3 5 chrX 19455627 19456476 -147193820 + L1Md_F2 LINE L1 5735 6582 0 5 733 721 166 14 61 chrX 19456476 19456624 -147193672 - ORR1B1 LTR MaLR -253 141 1 5 733 5589 176 36 70 chrX 19456624 19457499 -147192797 + MERVL_2A-int LTR ERVL 241 1133 -4628 5 733 2102 118 14 111 chrX 19457499 19457860 -147192436 + ORR1A4 LTR MaLR 1 326 -3 5 733 5589 176 36 70 chrX 19457860 19458193 -147192103 + MERVL_2A-int LTR ERVL 1134 1408 -4353 5 733 1252 56 0 0 chrX 19458193 19458337 -147191959 + B1_Mus1 SINE Alu 2 145 -3 5 733 627 87 29 0 chrX 19458342 19458446 -147191850 + (GGA)n Simple_repeat Simple_repeat 3 109 0 5 733 6691 157 49 14 chrX 19458446 19459597 -147190699 + MERVL_2A-int LTR ERVL 1406 2596 -3165 5 733 1477 48 5 0 chrX 19459600 19459786 -147190510 - MTB LTR MaLR -5 395 209 5 733 3362 91 39 36 chrX 19459727 19460285 -147190011 + MTA_Mm-int LTR MaLR 539 1098 0 6 733 3076 77 15 15 chrX 19460285 19460681 -147189615 + MTA_Mm LTR MaLR 1 396 0 6 733 16965 161 47 22 chrX 19460681 19463630 -147186666 + MERVL_2A-int LTR ERVL 2591 5612 -149 5 733 1726 176 18 71 chrX 19463653 19463990 -147186306 - ORR1C1 LTR MaLR -59 319 1 6 733 397 173 12 47 chrX 19463991 19464076 -147186220 + MERVL_2A-int LTR ERVL 5609 5690 -71 5 733 269 186 0 54 chrX 19464087 19464161 -147186135 + ORR1A3-int LTR MaLR 570 639 -1324 6 733 338 161 0 0 chrX 19464161 19464217 -147186079 + MERVL_2A-int LTR ERVL 5706 5761 0 5 733 792 247 172 54 chrX 19464218 19464619 -147185677 + MT2B LTR ERVL 1 492 -109 5 733 297 75 0 0 chrX 19464621 19464661 -147185635 + (TAGA)n Simple_repeat Simple_repeat 3 42 0 6 733 269 159 0 0 chrX 19464661 19464705 -147185591 + MT2B LTR ERVL 489 532 -1 5 733 281 315 0 61 chrX 19464705 19464769 -147185527 - MER2B DNA MER2_type -264 72 15 6 733 954 261 140 40 chrX 19464783 19465428 -147184868 + L1M4b LINE L1 1595 2449 -4653 6 733 511 318 7 39 chrX 19465532 19465686 -147184610 - B1_Mur1 SINE Alu 0 149 1 6 733 258 105 0 0 chrX 19465689 19465727 -147184569 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 6 733 385 313 50 50 chrX 19466107 19466248 -147184048 - B1F2 SINE Alu -7 142 2 6 733 304 324 61 26 chrX 19467201 19467315 -147182981 + MIRb SINE MIR 25 142 -126 6 733 1119 109 40 0 chrX 19467572 19467747 -147182549 + MT2C_Mm LTR ERVL 294 475 0 6 733 396 301 66 20 chrX 19467930 19468211 -147182085 + MER34A LTR ERV1 222 571 0 6 733 367 263 9 83 chrX 19469602 19469710 -147180586 + PB1 SINE Alu 24 123 -4 6 733 612 219 26 0 chrX 19471323 19471437 -147178859 + PB1D9 SINE Alu 1 117 -3 6 733 5159 60 37 2 chrX 19471620 19472549 -147177747 - L1Md_F2 LINE L1 -424 6158 5208 6 733 3531 62 2 23 chrX 19472549 19472991 -147177305 + L1Md_F2 LINE L1 6149 6581 -1 6 733 510 67 0 0 chrX 19473008 19473083 -147177213 + (CAGAGA)n Simple_repeat Simple_repeat 2 76 0 6 733 1022 225 80 0 chrX 19473323 19473523 -147176773 - B3 SINE B2 0 216 1 6 733 395 252 16 98 chrX 19473672 19473795 -147176501 + PB1D7 SINE Alu 2 114 -6 6 733 1226 243 10 68 chrX 19473803 19474034 -147176262 + B4A SINE B4 2 223 -69 6 733 514 31 0 0 chrX 19474034 19474099 -147176197 + L1Md_T LINE L1 6517 6581 -1 6 733 1226 243 10 68 chrX 19474099 19474176 -147176120 + B4A SINE B4 224 292 0 6 733 303 217 0 0 chrX 19474176 19474282 -147176014 + (CA)n Simple_repeat Simple_repeat 1 106 0 6 733 502 160 8 8 chrX 19474342 19474474 -147175822 + (CA)n Simple_repeat Simple_repeat 1 132 0 6 733 14099 86 21 2 chrX 19474748 19477214 -147173082 + L1VL4 LINE L1 21 2509 -1050 6 733 198 0 0 0 chrX 19477214 19477236 -147173060 + (GAAA)n Simple_repeat Simple_repeat 3 24 0 6 733 14099 73 22 3 chrX 19477236 19477547 -147172749 + L1VL4 LINE L1 2510 2841 -718 6 733 2654 81 16 8 chrX 19477543 19477906 -147172390 - L1Md_F2 LINE L1 -68 6514 6149 6 733 2893 35 0 0 chrX 19477905 19478247 -147172049 + L1_Mm LINE L1 5207 5548 -335 6 733 5052 75 21 10 chrX 19478239 19478906 -147171390 + L1VL4 LINE L1 2827 3503 -56 6 733 1749 20 15 15 chrX 19478906 19479112 -147171184 + L1Md_F3 LINE L1 6364 6569 -15 6 733 5052 75 21 10 chrX 19479112 19479168 -147171128 + L1VL4 LINE L1 3504 3558 -1 6 733 22 70 0 0 chrX 19479399 19479442 -147170854 + AT_rich Low_complexity Low_complexity 1 43 0 6 733 349 193 107 24 chrX 19479623 19479722 -147170574 - MER34 LTR ERV1 -72 499 382 6 733 243 231 127 56 chrX 19480010 19480135 -147170161 - LTR48 LTR ERV1 -642 145 4 6 733 283 293 19 39 chrX 19480161 19480264 -147170032 - MER34 LTR ERV1 -228 343 243 6 733 23 0 0 0 chrX 19480407 19480430 -147169866 + AT_rich Low_complexity Low_complexity 1 23 0 6 733 226 226 38 0 chrX 19480540 19480593 -147169703 + GA-rich Low_complexity Low_complexity 2 56 0 6 733 346 47 0 0 chrX 19482455 19482498 -147167798 + HY3 scRNA scRNA 5 47 -54 6 733 355 252 189 32 chrX 19482988 19483205 -147167091 + LTR37A LTR ERV1 2 252 -174 6 733 782 271 5 22 chrX 19483276 19483461 -147166835 - B3A SINE B2 -16 182 1 6 733 412 286 40 76 chrX 19484485 19484735 -147165561 - LTR37A LTR ERV1 0 426 186 6 733 1717 139 234 0 chrX 19484845 19485148 -147165148 - ORR1C1 LTR MaLR 0 378 5 6 733 679 177 15 53 chrX 19485157 19485288 -147165008 - B1F2 SINE Alu 0 149 24 6 733 433 273 40 73 chrX 19485288 19485307 -147164989 - ID_B1 SINE B4 0 224 80 6 733 7471 70 23 1 chrX 19486029 19487079 -147163217 - L1_Mus2 LINE L1 0 6566 5494 6 733 2183 142 29 61 chrX 19487609 19488020 -147162276 - RMER10B LTR ERVL 0 398 1 6 733 250 111 0 0 chrX 19488083 19488119 -147162177 + U2 snRNA snRNA 1 36 -152 6 733 372 77 0 0 chrX 19488960 19489012 -147161284 + (TCTCCC)n Simple_repeat Simple_repeat 2 53 0 6 733 482 93 676 0 chrX 19489036 19489144 -147161152 + B2_Mm2 SINE B2 1 181 -14 6 733 895 148 70 64 chrX 19489164 19489351 -147160945 - B2_Mm2 SINE B2 -5 190 3 6 733 662 265 119 14 chrX 19489443 19489661 -147160635 - B4A SINE B4 -51 241 1 6 733 2712 167 96 8 chrX 19490257 19490777 -147159519 + L1Md_F LINE L1 379 944 -5575 6 733 7448 92 17 8 chrX 19490764 19492478 -147157818 + L1_Mus2 LINE L1 4831 6564 -2 6 733 534 336 51 20 chrX 19492498 19492790 -147157506 - L1MC LINE L1 -2201 5681 5381 6 733 256 193 0 74 chrX 19492842 19492904 -147157392 + T-rich Low_complexity Low_complexity 29 89 0 6 733 536 252 118 0 chrX 19492904 19493031 -147157265 - B1_Mur1 SINE Alu -7 142 1 6 733 256 193 0 74 chrX 19493031 19493063 -147157233 + T-rich Low_complexity Low_complexity 2 28 0 6 733 209 238 0 0 chrX 19493073 19493115 -147157181 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 6 733 566 308 0 7 chrX 19493128 19493275 -147157021 - RSINE1 SINE B4 -17 148 3 6 733 628 184 93 20 chrX 19493285 19493435 -147156861 - B2_Mm2 SINE B2 -8 187 27 6 733 215 79 26 0 chrX 19493435 19493473 -147156823 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 6 733 733 108 175 0 chrX 19493474 19493594 -147156702 - B1_Mus1 SINE Alu -2 146 6 6 733 219 214 24 0 chrX 19493598 19493640 -147156656 - B2_Mm2 SINE B2 -152 43 1 6 733 207 0 0 0 chrX 19493774 19493797 -147156499 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 6 733 363 278 43 22 chrX 19493812 19493904 -147156392 - RSINE1 SINE B4 -69 96 3 6 733 328 390 82 21 chrX 19494059 19494292 -147156004 + L1MDa LINE L1 108 354 -6279 6 733 435 211 73 9 chrX 19495208 19495318 -147154978 - ERVL-B4-int LTR ERVL -1625 4089 3973 6 733 771 276 108 72 chrX 19495349 19495684 -147154612 - MTEa LTR MaLR -32 347 1 6 733 552 355 68 13 chrX 19495824 19496058 -147154238 + B4A SINE B4 43 289 -3 6 733 408 181 0 0 chrX 19496081 19496164 -147154132 + (CA)n Simple_repeat Simple_repeat 2 84 0 6 733 428 289 55 35 chrX 19496192 19496393 -147153903 + L1MD1 LINE L1 5884 6088 -154 6 733 525 307 88 22 chrX 19496424 19496697 -147153599 - MLT1B LTR MaLR -7 383 93 6 733 565 220 233 45 chrX 19496844 19497020 -147153276 - B3 SINE B2 -7 209 1 6 733 307 194 51 157 chrX 19497054 19497226 -147153070 - MER112 DNA MER1_type -104 157 6 6 733 2470 140 20 22 chrX 19497271 19497672 -147152624 - MTC LTR MaLR -20 401 2 6 733 18502 13 0 0 chrX 19497672 19499770 -147150526 + L1_Mm LINE L1 2187 4284 -1599 6 733 2051 17 0 0 chrX 19499765 19500000 -147150296 - L1_Mm LINE L1 -2364 3519 3285 6 733 14709 82 1 27 chrX 19500000 19502880 -147147416 - L1Md_F LINE L1 -2599 3284 484 1 733 19693 105 7 7 chrX 19502880 19503488 -147146808 - L1Md_F LINE L1 -1536 4347 3747 2 733 285 29 0 0 chrX 19503488 19503522 -147146774 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 733 955 109 0 35 chrX 19503522 19503665 -147146631 - B1_Mm SINE Alu -9 138 1 4 733 19693 116 7 35 chrX 19503665 19506785 -147143511 - L1Md_F LINE L1 -2137 3746 724 2 733 467 225 15 8 chrX 19506790 19506920 -147143376 - L1Md_F LINE L1 -5811 805 675 2 733 387 252 16 103 chrX 19506978 19507214 -147143082 - L1VL1 LINE L1 -6029 393 57 5 733 6554 88 14 18 chrX 19507240 19507795 -147142501 - L1VL4 LINE L1 -773 2786 2239 6 733 3824 51 8 0 chrX 19507795 19508266 -147142030 + MT2C_Mm LTR ERVL 1 475 0 7 733 6554 88 14 18 chrX 19508266 19508509 -147141787 - L1VL4 LINE L1 -1321 2238 1990 6 733 4444 75 2 18 chrX 19508509 19509106 -147141190 + LTRIS_Mus LTR ERV1 1 587 0 8 733 6554 88 14 18 chrX 19509106 19509348 -147140948 - L1VL4 LINE L1 -1570 1989 1749 6 733 16856 23 1 0 chrX 19509348 19511414 -147138882 + L1Md_T LINE L1 3520 5586 -297 9 733 8632 25 0 0 chrX 19511414 19512408 -147137888 + L1Md_T LINE L1 5587 6580 -2 9 733 5580 89 11 26 chrX 19512408 19513171 -147137125 - L1VL4 LINE L1 -1799 1760 1013 6 733 1141 88 0 0 chrX 19513171 19513318 -147136978 - B1_Mus2 SINE Alu 0 147 1 1 733 5580 128 18 7 chrX 19513318 19514104 -147136192 - L1VL4 LINE L1 -2547 1012 212 6 733 896 236 24 10 chrX 19514987 19515192 -147135104 - B3 SINE B2 -7 209 2 1 733 684 283 91 11 chrX 19515933 19516119 -147134177 - ID_B1 SINE B4 -22 202 2 1 733 679 225 0 122 chrX 19516276 19516448 -147133848 + B3A SINE B2 2 152 -46 1 733 539 15 15 0 chrX 19516450 19516518 -147133778 + (CA)n Simple_repeat Simple_repeat 1 69 0 1 733 3257 24 39 0 chrX 19516727 19517108 -147133188 - MTA_Mm LTR MaLR 0 396 1 1 733 9097 31 6 2 chrX 19517110 19518201 -147132095 - MTA_Mm-int LTR MaLR -2 1096 1 1 733 3257 24 39 0 chrX 19518201 19518582 -147131714 - MTA_Mm LTR MaLR 0 396 1 1 733 1568 213 21 70 chrX 19519501 19519664 -147130632 + ORR1D1 LTR MaLR 10 168 -206 1 733 222 37 0 0 chrX 19519664 19519691 -147130605 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 733 1568 213 21 70 chrX 19519691 19519911 -147130385 + ORR1D1 LTR MaLR 169 373 -1 1 733 2674 195 70 24 chrX 19520145 19520928 -147129368 + RLTR13D3 LTR ERVK 1 1114 0 1 733 578 100 0 10 chrX 19521109 19521210 -147129086 - L1Md_F2 LINE L1 -12 6570 6471 1 733 29 0 0 0 chrX 19521246 19521275 -147129021 + AT_rich Low_complexity Low_complexity 1 29 0 2 733 310 276 115 0 chrX 19521333 19521420 -147128876 + B3 SINE B2 85 181 -35 2 733 811 248 32 51 chrX 19521899 19522116 -147128180 + B3 SINE B2 4 216 0 2 733 1128 78 0 0 chrX 19522439 19522580 -147127716 - B1_Mus1 SINE Alu -7 141 1 2 733 321 155 68 17 chrX 19523841 19523900 -147126396 - B3 SINE B2 -154 62 1 2 733 235 273 0 0 chrX 19524804 19524859 -147125437 + CT-rich Low_complexity Low_complexity 3 57 0 2 733 1197 197 23 0 chrX 19524984 19525202 -147125094 + URR1B DNA MER1_type 3 225 0 2 733 4803 193 34 12 chrX 19525773 19526716 -147123580 - Lx5 LINE L1 -3 7047 6084 2 733 2154 165 51 18 chrX 19526919 19527313 -147122983 - MTB_Mm LTR MaLR 0 407 1 2 733 306 50 0 0 chrX 19527652 19527692 -147122604 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 733 269 269 87 15 chrX 19527706 19527855 -147122441 + MLT1A1 LTR MaLR 211 408 0 3 733 251 286 55 0 chrX 19527856 19527947 -147122349 - LTR48 LTR ERV1 -313 474 379 3 733 420 303 83 0 chrX 19528036 19528168 -147122128 - MER34A LTR ERV1 -424 147 5 3 733 771 246 54 10 chrX 19528210 19528415 -147121881 + B3 SINE B2 1 214 -2 3 733 248 292 27 14 chrX 19528423 19528496 -147121800 + L2 LINE L2 2835 2908 -511 3 733 816 196 17 105 chrX 19528506 19528745 -147121551 - Lx6 LINE L1 -30 7430 7213 3 733 239 384 32 0 chrX 19528752 19528877 -147121419 + L2 LINE L2 2930 3058 -361 3 733 1820 176 40 48 chrX 19529152 19529529 -147120767 - ORR1D1 LTR MaLR 0 374 1 3 91 249 313 207 53 chrX 19529529 19529775 -147120521 - MER34A LTR ERV1 -8 563 280 3 734 1843 9 0 0 chrX 19529790 19530005 -147120291 + L1Md_A LINE L1 5372 5586 -297 3 734 8849 14 0 0 chrX 19530005 19531001 -147119295 + L1Md_A LINE L1 5587 6582 0 3 734 572 269 35 35 chrX 19531060 19531233 -147119063 - MER34A LTR ERV1 -395 176 4 3 734 3293 71 60 11 chrX 19531272 19531725 -147118571 - MT2C_Mm LTR ERVL 0 475 1 3 734 233 182 18 0 chrX 19531746 19531801 -147118495 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 734 306 336 37 22 chrX 19532027 19532161 -147118135 + B1F SINE Alu 1 136 -13 4 734 213 65 0 0 chrX 19532161 19532192 -147118104 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 734 314 169 41 27 chrX 19532277 19532350 -147117946 - MTC LTR MaLR 0 421 348 4 734 849 128 14 0 chrX 19532395 19532543 -147117753 - L1_Mus2 LINE L1 -5 6633 6484 4 734 1053 109 0 0 chrX 19532543 19532699 -147117597 - L1_Mus2 LINE L1 -405 6161 6006 4 734 2241 151 249 0 chrX 19532682 19533200 -147117096 - L1_Mm LINE L1 -802 5081 4435 4 734 5064 143 10 65 chrX 19533196 19533366 -147116930 + L1_Mus4 LINE L1 4944 5112 -771 4 734 1122 82 0 20 chrX 19533366 19533515 -147116781 + B1_Mus2 SINE Alu 2 147 0 4 734 7425 103 8 23 chrX 19533515 19535088 -147115208 + L1_Mus4 LINE L1 5113 6630 -6 4 734 959 42 0 0 chrX 19535750 19535870 -147114426 + B1_Mm SINE Alu 28 147 0 4 734 1778 5 52 0 chrX 19536007 19536218 -147114078 - L1Md_A LINE L1 0 6582 6361 4 734 9284 94 8 4 chrX 19537188 19539330 -147110966 - L1_Mus2 LINE L1 -1 6565 4412 5 734 330 98 0 0 chrX 19539761 19539812 -147110484 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 734 186 259 172 23 chrX 19540751 19540838 -147109458 + MIRm SINE MIR 84 183 -93 5 734 23 0 0 0 chrX 19541168 19541191 -147109105 + AT_rich Low_complexity Low_complexity 1 23 0 5 734 235 284 44 15 chrX 19542217 19542285 -147108011 + ID4_ SINE ID 3 72 -11 5 734 447 218 0 0 chrX 19542646 19542724 -147107572 - PB1D10 SINE Alu 0 117 40 5 734 307 132 0 0 chrX 19542724 19542777 -147107519 - Lx2B LINE L1 -724 6276 6224 5 734 223 333 0 0 chrX 19542777 19542837 -147107459 - PB1D10 SINE Alu -56 61 2 5 734 7304 145 7 11 chrX 19542874 19544095 -147106201 - Lx2B LINE L1 -2 6998 5783 5 734 6086 88 42 86 chrX 19544116 19544733 -147105563 - L1_Mus3 LINE L1 0 6638 5992 5 734 1201 61 0 7 chrX 19544733 19544881 -147105415 + B1_Mm SINE Alu 1 147 0 6 734 6086 88 42 86 chrX 19544881 19544958 -147105338 - L1_Mus3 LINE L1 -647 5991 5991 6 734 1554 6 0 0 chrX 19544958 19545133 -147105163 + (GAA)n Simple_repeat Simple_repeat 1 175 0 6 734 6086 94 27 55 chrX 19545133 19545756 -147104540 - L1_Mus3 LINE L1 -647 5991 5368 5 734 379 0 0 0 chrX 19545755 19545804 -147104492 - MusHAL1 LINE L1 -314 2398 2350 6 734 2364 92 28 5 chrX 19545829 19546118 -147104178 - MusHAL1 LINE L1 -314 2398 2102 6 734 207 0 0 0 chrX 19546118 19546141 -147104155 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 734 2364 92 28 5 chrX 19546141 19546243 -147104053 - MusHAL1 LINE L1 -611 2101 1998 6 734 4014 184 6 35 chrX 19546256 19546686 -147103610 - Lx2B LINE L1 -130 5747 5316 5 734 243 0 0 0 chrX 19546686 19546713 -147103583 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 734 4014 184 6 35 chrX 19546713 19547164 -147103132 - Lx2B LINE L1 -562 5315 4892 5 734 21 89 0 0 chrX 19547287 19547343 -147102953 + AT_rich Low_complexity Low_complexity 1 56 0 6 734 29341 107 12 7 chrX 19547664 19553791 -147096505 + L1_Mus1 LINE L1 409 6567 0 6 734 392 292 0 22 chrX 19553840 19553931 -147096365 + B3A SINE B2 1 89 -109 6 734 917 289 83 20 chrX 19553931 19554583 -147095713 - L1M4 LINE L1 -1805 4341 3649 7 734 877 129 49 35 chrX 19554717 19554861 -147095435 + B1_Mur4 SINE Alu 1 146 -4 7 734 349 253 11 0 chrX 19554867 19554962 -147095334 - L1M4 LINE L1 -2570 3576 3481 7 734 7806 196 64 8 chrX 19555145 19557138 -147093158 - Lx6 LINE L1 -3 7457 5335 7 734 3528 158 21 35 chrX 19557115 19557684 -147092612 + L1_Mur3 LINE L1 3317 3877 -2003 7 734 2471 150 27 107 chrX 19557684 19558169 -147092127 - RLTR41 LTR ERV1 0 446 1 7 734 3528 158 21 35 chrX 19558169 19558345 -147091951 + L1_Mur3 LINE L1 3878 4052 -1828 7 734 1004 177 33 12 chrX 19558320 19558560 -147091736 + L1_Mur3 LINE L1 4277 4521 -1359 7 734 301 209 0 0 chrX 19558554 19558621 -147091675 + L1_Mur3 LINE L1 4874 4940 -937 7 734 874 224 70 56 chrX 19558712 19558925 -147091371 - B3 SINE B2 0 216 1 7 734 6135 112 5 1 chrX 19559427 19560393 -147089903 + L1_Mus3 LINE L1 4372 5341 -542 7 734 6886 86 8 8 chrX 19560388 19561396 -147088900 + L1_Mus3 LINE L1 5626 6633 -5 7 734 343 282 13 0 chrX 19561463 19561541 -147088755 - ID2 SINE ID -3 80 2 7 734 223 275 76 168 chrX 19561767 19561898 -147088398 + PB1 SINE Alu 1 119 -8 7 734 377 219 153 137 chrX 19561786 19561976 -147088320 + B4 SINE B4 100 292 0 7 734 783 101 0 0 chrX 19562010 19562129 -147088167 + (TC)n Simple_repeat Simple_repeat 1 119 0 8 734 488 16 16 0 chrX 19562130 19562191 -147088105 + (CA)n Simple_repeat Simple_repeat 1 62 0 8 734 183 184 0 0 chrX 19562352 19562390 -147087906 + CT-rich Low_complexity Low_complexity 3 40 0 8 734 450 271 82 0 chrX 19562396 19562518 -147087778 - B1_Mur1 SINE Alu -15 134 3 8 734 1322 217 16 80 chrX 19562792 19563157 -147087139 + RLTR15 LTR ERVK 1 342 -17 8 734 235 264 0 19 chrX 19563377 19563431 -147086865 - ID4_ SINE ID -29 54 2 8 734 1045 277 19 23 chrX 19563671 19563930 -147086366 + B4A SINE B4 33 290 -2 8 734 186 311 0 0 chrX 19563958 19564106 -147086190 + (CA)n Simple_repeat Simple_repeat 1 148 0 8 734 466 316 6 6 chrX 19564164 19564524 -147085772 + (CA)n Simple_repeat Simple_repeat 1 360 0 8 734 186 167 0 0 chrX 19564689 19564725 -147085571 + GA-rich Low_complexity Low_complexity 5 40 0 8 734 2442 89 6 0 chrX 19564731 19565056 -147085240 + ORR1A2 LTR MaLR 1 327 0 8 734 362 290 99 54 chrX 19565147 19565461 -147084835 + L1MEg LINE L1 1089 1416 -4668 9 734 472 263 0 0 chrX 19565471 19565568 -147084728 + B4A SINE B4 2 98 -194 9 734 581 269 8 0 chrX 19565568 19565687 -147084609 + B3A SINE B2 1 120 -78 9 734 295 342 127 8 chrX 19565785 19565903 -147084393 + B4A SINE B4 82 213 -79 9 734 8326 73 0 0 chrX 19566139 19567262 -147083034 - L1_Mm LINE L1 -92 5791 4669 9 734 1937 52 0 0 chrX 19567258 19567509 -147082787 + L1_Mm LINE L1 4433 4683 -1200 9 734 2008 33 12 0 chrX 19567510 19567750 -147082546 + L1Md_F2 LINE L1 6326 6568 -14 9 734 2557 242 47 127 chrX 19567763 19568729 -147081567 + RMER19B LTR ERVK 15 902 0 9 734 4357 118 63 7 chrX 19568962 19569656 -147080640 - L1_Mus3 LINE L1 0 6638 5906 9 734 601 298 10 54 chrX 19570087 19570304 -147079992 + ORR1D1 LTR MaLR 179 379 0 9 734 336 243 73 27 chrX 19570309 19570514 -147079782 - L1M5 LINE L1 -689 5490 5287 9 734 26 64 0 0 chrX 19570600 19570647 -147079649 + AT_rich Low_complexity Low_complexity 1 47 0 9 734 222 328 82 0 chrX 19570719 19570780 -147079516 - RSINE1 SINE B4 -91 74 9 1 734 382 312 55 28 chrX 19570785 19571075 -147079221 - L1M5 LINE L1 -937 5209 4912 9 734 710 172 82 50 chrX 19571277 19571436 -147078860 + B2_Mm2 SINE B2 4 167 -28 1 734 26 64 0 0 chrX 19571745 19571792 -147078504 + AT_rich Low_complexity Low_complexity 1 47 0 1 734 643 313 0 0 chrX 19571858 19572005 -147078291 - RSINE1 SINE B4 -16 149 3 1 734 36309 13 2 7 chrX 19572199 19577603 -147072693 + L1Md_A LINE L1 214 5586 -297 1 734 8857 14 0 0 chrX 19577603 19578599 -147071697 + L1Md_A LINE L1 5587 6582 0 1 734 24 77 0 0 chrX 19578709 19578761 -147071535 + AT_rich Low_complexity Low_complexity 1 52 0 1 734 390 288 48 9 chrX 19578775 19578880 -147071416 + PB1 SINE Alu 10 118 -9 1 734 295 152 43 35 chrX 19578884 19579000 -147071296 + (TAA)n Simple_repeat Simple_repeat 2 118 0 1 734 21 0 0 0 chrX 19579519 19579540 -147070756 + AT_rich Low_complexity Low_complexity 1 21 0 1 734 715 175 79 0 chrX 19579551 19579677 -147070619 + B1_Mur3 SINE Alu 2 137 -12 1 734 380 37 0 18 chrX 19579679 19579734 -147070562 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 1 734 333 250 10 55 chrX 19580552 19580751 -147069545 + RMER17C LTR ERVK 88 277 -133 1 734 576 250 0 71 chrX 19581531 19581686 -147068610 + B1_Mur2 SINE Alu 1 144 -5 1 734 451 271 0 0 chrX 19582025 19582121 -147068175 + MTE2b LTR MaLR 1 96 -283 1 734 2710 192 7 34 chrX 19582129 19582717 -147067579 + L1VL4 LINE L1 189 760 -5542 1 734 7155 127 163 3 chrX 19582710 19585142 -147065154 + L1_Mus4 LINE L1 3732 6629 -7 1 734 946 180 126 0 chrX 19585465 19585648 -147064648 + B3 SINE B2 1 206 -10 1 734 350 298 99 26 chrX 19585665 19585914 -147064382 + L1MD LINE L1 5016 5295 -851 1 734 709 137 114 0 chrX 19585970 19586101 -147064195 - MTC LTR MaLR -275 146 1 1 734 780 307 0 0 chrX 19586272 19586464 -147063832 - B3A SINE B2 0 198 7 1 734 662 252 14 0 chrX 19586480 19586627 -147063669 + B1_Mur1 SINE Alu 1 149 0 1 734 278 245 0 19 chrX 19586928 19586982 -147063314 + B4A SINE B4 67 119 -173 1 734 251 149 21 21 chrX 19586980 19587028 -147063268 - MTE2a LTR MaLR -6 373 326 1 734 543 302 7 26 chrX 19587029 19587182 -147063114 + RSINE1 SINE B4 2 151 -14 1 734 214 250 36 0 chrX 19587201 19587257 -147063039 + G-rich Low_complexity Low_complexity 5 62 0 1 734 846 286 107 73 chrX 19587268 19587435 -147062861 - MTE2a LTR MaLR -43 336 171 1 734 1024 204 54 19 chrX 19587435 19587640 -147062656 - B3 SINE B2 -4 212 1 1 734 846 286 107 73 chrX 19587640 19587789 -147062507 - MTE2a LTR MaLR -209 170 9 1 734 384 269 18 53 chrX 19587794 19587908 -147062388 + B4A SINE B4 142 251 -41 1 734 7077 61 21 17 chrX 19588473 19589453 -147060843 - L1Md_F2 LINE L1 -12 6570 5587 1 734 27 0 0 0 chrX 19589756 19589783 -147060513 + AT_rich Low_complexity Low_complexity 1 27 0 1 734 2646 76 0 24 chrX 19590161 19590538 -147059758 - L1Md_F2 LINE L1 -2 6580 6213 1 734 31404 101 28 13 chrX 19590538 19596271 -147054025 - L1Md_F2 LINE L1 -541 6041 214 1 734 461 278 43 0 chrX 19597487 19597602 -147052694 - B4 SINE B4 0 292 173 1 734 333 366 27 0 chrX 19597655 19597767 -147052529 - B4 SINE B4 -95 197 83 1 734 226 151 18 70 chrX 19597807 19597864 -147052432 - B3 SINE B2 -4 212 159 1 734 321 26 0 0 chrX 19598425 19598463 -147051833 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 734 906 296 168 22 chrX 19598723 19599128 -147051168 + Tigger7 DNA MER2_type 4 467 -2024 1 734 618 213 89 160 chrX 19599160 19599376 -147050920 - B4A SINE B4 0 292 98 1 734 892 249 19 14 chrX 19599376 19599588 -147050708 - B3 SINE B2 -3 213 1 1 734 618 213 89 160 chrX 19599588 19599684 -147050612 - B4A SINE B4 -195 97 2 1 734 1078 212 21 0 chrX 19599707 19599900 -147050396 + B3 SINE B2 14 210 -6 1 734 712 184 0 87 chrX 19600301 19600450 -147049846 + B1_Mur4 SINE Alu 8 143 -7 1 734 615 270 19 62 chrX 19600474 19600683 -147049613 + B3 SINE B2 5 204 -12 1 734 331 281 69 50 chrX 19600738 19600839 -147049457 + PB1D10 SINE Alu 10 112 -5 1 734 3534 65 18 89 chrX 19601099 19601707 -147048589 + L1_Mur1 LINE L1 4912 5476 -410 1 734 259 246 12 19 chrX 19601715 19601820 -147048476 - L1MD2 LINE L1 -177 6002 5897 1 734 816 203 0 0 chrX 19601910 19602038 -147048258 - B3 SINE B2 -86 130 3 1 734 322 300 62 39 chrX 19602040 19602248 -147048048 - L1MD LINE L1 -414 5828 5616 1 734 256 203 26 92 chrX 19602281 19602357 -147047939 + 4.5SRNA scRNA scRNA 10 80 -14 1 734 238 234 115 13 chrX 19602291 19602369 -147047927 + B1F1 SINE Alu 15 100 -49 1 734 2020 197 92 77 chrX 19602576 19603099 -147047197 - MT2A LTR ERVL 0 533 3 1 734 657 313 103 4 chrX 19603405 19603668 -147046628 - B4 SINE B4 -2 290 2 1 734 374 296 95 40 chrX 19603668 19603923 -147046373 - L1MC LINE L1 -739 5440 5175 1 734 4622 170 63 16 chrX 19603988 19604838 -147045458 + RMER19B LTR ERVK 1 890 -12 1 734 742 256 158 50 chrX 19604854 19605076 -147045220 - B4A SINE B4 -36 256 11 1 734 29 0 0 0 chrX 19605153 19605182 -147045114 + AT_rich Low_complexity Low_complexity 1 29 0 1 734 233 260 138 38 chrX 19605189 19605209 -147045087 - RSINE1 SINE B4 -4 161 141 1 734 330 26 0 0 chrX 19605209 19605248 -147045048 + (GA)n Simple_repeat Simple_repeat 1 39 0 1 734 233 260 138 38 chrX 19605248 19605307 -147044989 - RSINE1 SINE B4 -25 140 74 1 734 2248 179 5 0 chrX 19605333 19605708 -147044588 - ORR1C1 LTR MaLR -1 377 1 1 734 1192 278 40 46 chrX 19605777 19606128 -147044168 + ORR1E LTR MaLR 6 354 -5 1 734 3150 234 27 26 chrX 19606161 19606974 -147043322 - Lx6 LINE L1 -864 6596 5783 1 734 261 57 0 0 chrX 19606988 19607023 -147043273 + (TAG)n Simple_repeat Simple_repeat 1 35 0 1 734 2906 161 81 28 chrX 19607025 19607631 -147042665 - Lx3C LINE L1 -11 6965 6328 1 734 2930 175 67 17 chrX 19607644 19608300 -147041996 - Lx6 LINE L1 -113 5767 5079 1 734 1241 144 57 1 chrX 19608300 19608536 -147041760 - RLTR12A LTR ERVK 0 568 308 1 734 2989 148 38 44 chrX 19608536 19609167 -147041129 - Lx6 LINE L1 -1513 4367 3741 1 734 247 229 38 199 chrX 19609231 19609362 -147040934 + L1VL2 LINE L1 217 357 -6065 1 734 456 227 15 8 chrX 19609438 19609571 -147040725 + L1Md_F LINE L1 670 803 -5813 1 734 4772 121 13 34 chrX 19609579 19611069 -147039227 + L1Md_F LINE L1 725 2240 -3643 1 734 4320 12 14 0 chrX 19611069 19611555 -147038741 + MT2_Mm LTR ERVL 1 493 0 1 734 47929 17 9 0 chrX 19611555 19616868 -147033428 + MERVL-int LTR ERVL 1 5360 -125 1 734 387 167 46 35 chrX 19616868 19616955 -147033341 + ORR1E-int LTR MaLR 553 640 -1323 1 734 322 0 0 0 chrX 19616955 19616993 -147033303 + MERVL-int LTR ERVL 5448 5485 0 1 734 4599 12 14 0 chrX 19616993 19617479 -147032817 + MT2_Mm LTR ERVL 1 493 0 1 734 1581 124 4 0 chrX 19617479 19617713 -147032583 + L1Md_F2 LINE L1 2236 2470 -3413 1 734 337 240 0 40 chrX 19617714 19617814 -147032482 + CT-rich Low_complexity Low_complexity 4 99 0 1 734 711 112 8 16 chrX 19617820 19617947 -147032349 + (TCTCCC)n Simple_repeat Simple_repeat 1 126 0 1 734 1188 144 59 0 chrX 19617955 19618157 -147032139 + RMER17A-int LTR ERVK 1515 1728 0 1 734 2557 118 9 16 chrX 19618157 19618586 -147031710 + RMER17A LTR ERVK 1 426 -325 1 734 21190 101 14 20 chrX 19618599 19619412 -147030884 + L1Md_F2 LINE L1 2456 3280 -2603 1 734 2977 70 16 3 chrX 19619412 19619787 -147030509 + L1Md_F3 LINE L1 6205 6584 0 1 734 21190 101 14 20 chrX 19619787 19622123 -147028173 + L1Md_F2 LINE L1 3281 5586 -297 1 734 8992 30 4 4 chrX 19622123 19623119 -147027177 + L1Md_F2 LINE L1 5587 6582 0 1 734 7545 78 7 4 chrX 19623177 19624642 -147025654 + L1_Mus2 LINE L1 5099 6566 0 1 734 751 180 84 7 chrX 19624645 19624814 -147025482 - ORR1B1 LTR MaLR -52 342 138 1 734 7923 144 38 53 chrX 19624814 19626389 -147023907 - L1_Mur3 LINE L1 -2163 3717 1305 1 734 1658 159 23 82 chrX 19626389 19626731 -147023565 - RLTRETN_Mm LTR ERVK 0 322 1 1 734 7923 166 39 59 chrX 19626731 19627097 -147023199 - L1_Mur3 LINE L1 -6424 1304 947 1 734 867 147 157 0 chrX 19627101 19627299 -147022997 - L1_Mur3 LINE L1 -6960 768 540 1 734 238 91 0 0 chrX 19627420 19627453 -147022843 + RMER17C LTR ERVK 3 35 -375 1 734 4241 145 57 25 chrX 19627455 19628126 -147022170 - RLTR17 LTR ERVK 0 692 1 1 734 7635 176 72 51 chrX 19628126 19629572 -147020724 - RMER3D-int LTR ERVK 0 2842 1384 1 734 207 0 0 0 chrX 19629572 19629595 -147020701 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 734 7635 176 72 51 chrX 19629595 19629939 -147020357 - RMER3D-int LTR ERVK -1459 1383 1016 1 734 455 147 144 18 chrX 19629976 19630087 -147020209 - RMER3D-int LTR ERVK -2232 610 486 1 734 644 207 11 40 chrX 19630216 19630392 -147019904 - RMER3D-int LTR ERVK -1991 851 681 1 734 11080 169 107 118 chrX 19630399 19630792 -147019504 + RMER17C-int LTR ERVK 34 407 -2831 1 734 207 0 0 0 chrX 19630792 19630815 -147019481 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 1 734 11080 169 107 118 chrX 19630815 19631062 -147019234 + RMER17C-int LTR ERVK 408 710 -2528 1 734 248 0 31 0 chrX 19631062 19631094 -147019202 + (CCA)n Simple_repeat Simple_repeat 3 35 0 1 734 11080 169 107 118 chrX 19631094 19632460 -147017836 + RMER17C-int LTR ERVK 711 2022 -1216 1 734 6375 125 13 43 chrX 19632460 19633482 -147016814 + Lx2A1 LINE L1 6010 7000 -8 1 734 11080 169 107 118 chrX 19633482 19634063 -147016233 + RMER17C-int LTR ERVK 2023 2608 -630 1 734 261 216 0 19 chrX 19634063 19634115 -147016181 - LSU-rRNA_Hsa rRNA rRNA -783 4252 4202 1 734 11080 169 107 118 chrX 19634115 19634375 -147015921 + RMER17C-int LTR ERVK 2609 2872 -366 1 734 441 81 0 0 chrX 19634375 19634437 -147015859 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 734 11080 169 107 118 chrX 19634437 19634775 -147015521 + RMER17C-int LTR ERVK 2873 3236 -2 1 734 1556 171 27 30 chrX 19634775 19635113 -147015183 + RMER17C LTR ERVK 1 337 -73 1 734 594 252 28 78 chrX 19635756 19635898 -147014398 + RSINE1 SINE B4 1 135 -30 1 734 399 98 0 0 chrX 19635898 19635959 -147014337 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 734 216 0 0 0 chrX 19635970 19635994 -147014302 + (GA)n Simple_repeat Simple_repeat 1 24 0 1 734 542 271 79 0 chrX 19636175 19636315 -147013981 + B3A SINE B2 2 152 -46 1 734 21 0 0 0 chrX 19636846 19636867 -147013429 + GC_rich Low_complexity Low_complexity 1 21 0 1 734 284 301 91 73 chrX 19640196 19640361 -147009935 - MLT1L LTR MaLR -343 267 100 1 734 409 283 16 50 chrX 19640360 19640542 -147009754 - Tigger7 DNA MER2_type -38 2453 2278 1 734 599 311 53 53 chrX 19640573 19640780 -147009516 - Tigger7 DNA MER2_type -2262 229 23 1 734 189 229 0 111 chrX 19640817 19640871 -147009425 - MER5B DNA MER1_type -36 142 95 1 734 317 278 0 27 chrX 19640887 19640961 -147009335 - ID4 SINE ID -9 74 3 1 734 225 272 136 0 chrX 19640924 19641005 -147009291 - ZP3AR Satellite Satellite -78 134 43 1 734 252 262 16 0 chrX 19641007 19641068 -147009228 - MER5B DNA MER1_type -115 63 2 1 734 2076 149 104 6 chrX 19641418 19641783 -147008513 - MTC LTR MaLR 0 421 21 1 734 291 28 0 0 chrX 19641784 19641820 -147008476 + (CATA)n Simple_repeat Simple_repeat 1 36 0 1 734 351 0 0 0 chrX 19641850 19641889 -147008407 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 734 373 219 0 27 chrX 19643351 19643426 -147006870 - ID4_ SINE ID -10 73 1 1 734 381 237 56 7 chrX 19644316 19644428 -147005868 - MTD LTR MaLR -302 117 1 1 734 2161 45 0 29 chrX 19644575 19644852 -147005444 + L1Md_F3 LINE L1 6316 6584 0 1 734 1184 275 83 27 chrX 19645129 19645577 -147004719 - RMER5 LTR ERV1 -22 512 40 1 734 210 37 0 0 chrX 19645913 19645940 -147004356 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 734 323 253 60 0 chrX 19645973 19646056 -147004240 + BC1_Mm scRNA scRNA 6 93 -59 1 734 398 239 217 18 chrX 19646069 19646235 -147004061 + B3 SINE B2 1 199 -17 1 734 958 137 64 64 chrX 19646377 19646564 -147003732 + B2_Mm2 SINE B2 2 188 -7 2 734 345 24 0 0 chrX 19647004 19647046 -147003250 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 734 944 70 0 8 chrX 19648317 19648446 -147001850 - L1Md_F2 LINE L1 -12 6570 6443 2 734 965 221 13 90 chrX 19648708 19648942 -147001354 + B3 SINE B2 1 216 0 2 734 342 0 0 0 chrX 19648977 19649015 -147001281 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2 734 1377 25 0 0 chrX 19649015 19649175 -147001121 - B2_Mm1t SINE B2 -33 160 1 2 734 330 279 0 37 chrX 19649574 19649656 -147000640 + ID4_ SINE ID 5 83 0 2 734 649 191 41 68 chrX 19649716 19649862 -147000434 + ID_B1 SINE B4 79 220 -4 2 734 1449 291 74 22 chrX 19650127 19650760 -146999536 - L1MD2 LINE L1 -14 6736 6071 2 734 958 235 113 14 chrX 19650804 19651088 -146999208 - L1MA4 LINE L1 -254 5925 5611 2 734 849 236 108 20 chrX 19651088 19651283 -146999013 - ID_B1 SINE B4 -12 212 1 2 734 958 223 112 14 chrX 19651283 19651315 -146998981 - L1MA4 LINE L1 -690 5610 5577 2 734 1573 190 68 60 chrX 19651318 19651733 -146998563 + RMER10A LTR ERVL 1 418 -24 2 734 1038 39 0 0 chrX 19651733 19651860 -146998436 + (TCTCCC)n Simple_repeat Simple_repeat 6 132 0 2 734 560 315 52 62 chrX 19651868 19652247 -146998049 - L1MA4 LINE L1 -725 5572 5175 2 734 670 241 18 24 chrX 19652249 19652415 -146997881 - RMER30 DNA MER1_type -33 169 5 2 734 895 300 34 43 chrX 19652425 19652840 -146997456 - L1MA4 LINE L1 -952 5191 4781 2 734 369 0 0 0 chrX 19652849 19652890 -146997406 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 734 1098 248 80 11 chrX 19653000 19653447 -146996849 - L1MD2 LINE L1 -719 6031 5557 2 734 488 250 55 41 chrX 19653658 19653804 -146996492 - B1F1 SINE Alu -1 148 1 2 734 207 329 50 12 chrX 19653886 19653966 -146996330 - L2a LINE L2 0 3426 3344 2 734 187 200 89 0 chrX 19653998 19654043 -146996253 - L2a LINE L2 -252 3174 3126 2 734 290 346 31 43 chrX 19654107 19654270 -146996026 + RLTR17 LTR ERVK 279 439 -253 2 734 1756 90 37 4 chrX 19654375 19654620 -146995676 - ORR1A2 LTR MaLR -74 253 1 2 734 4071 155 76 96 chrX 19654641 19655549 -146994747 + RMER19B LTR ERVK 1 890 -12 2 734 303 28 0 0 chrX 19655773 19655809 -146994487 + (TTG)n Simple_repeat Simple_repeat 2 37 0 2 734 1239 279 36 4 chrX 19655813 19656094 -146994202 - B4 SINE B4 -1 291 2 2 734 340 315 87 29 chrX 19656095 19656208 -146994088 - L1MD2 LINE L1 -1474 5063 4934 2 734 330 276 57 9 chrX 19656208 19656314 -146993982 - PB1D9 SINE Alu -5 115 5 2 734 340 315 87 29 chrX 19656314 19656406 -146993890 - L1MD2 LINE L1 -1604 4933 4846 2 734 24 0 0 0 chrX 19656504 19656528 -146993768 + AT_rich Low_complexity Low_complexity 1 24 0 2 734 756 292 85 35 chrX 19656536 19656744 -146993552 + B4A SINE B4 3 230 -62 2 734 1032 221 0 42 chrX 19656744 19656961 -146993335 + B3 SINE B2 3 210 -6 2 734 756 292 85 35 chrX 19656961 19657011 -146993285 + B4A SINE B4 231 274 -18 2 734 638 262 110 131 chrX 19657055 19657186 -146993110 - L1MD2 LINE L1 -1831 4706 4556 2 734 5659 33 0 6 chrX 19657186 19657823 -146992473 + L1Md_F2 LINE L1 5950 6582 0 2 734 638 252 106 139 chrX 19657823 19657958 -146992338 - L1MD2 LINE L1 -1982 4555 4470 2 734 1177 125 10 42 chrX 19657958 19658150 -146992146 - B2_Mm2 SINE B2 -9 186 1 2 734 638 252 106 139 chrX 19658150 19658465 -146991831 - L1MD2 LINE L1 -2068 4469 4129 2 734 394 198 0 44 chrX 19658477 19658567 -146991729 + B1_Mus2 SINE Alu 62 147 0 2 734 241 339 0 142 chrX 19658576 19658617 -146991679 + ID_B1 SINE B4 81 195 -29 2 734 350 333 0 0 chrX 19658617 19658710 -146991586 + B1F SINE Alu 25 117 -32 2 734 450 218 99 61 chrX 19658727 19658908 -146991388 + Lx6 LINE L1 7226 7413 -47 2 734 464 164 87 0 chrX 19658876 19658980 -146991316 + Lx6 LINE L1 7344 7456 -4 2 734 525 296 26 5 chrX 19659103 19659293 -146991003 - L1MD2 LINE L1 -2543 3994 3801 2 734 1247 34 7 14 chrX 19659334 19659482 -146990814 - B1_Mm SINE Alu 0 147 1 2 734 24 77 0 0 chrX 19659560 19659612 -146990684 + AT_rich Low_complexity Low_complexity 1 52 0 2 91 14022 82 31 14 chrX 19659778 19662233 -146988063 - L1VL4 LINE L1 -626 2933 430 2 735 6065 47 16 7 chrX 19662286 19662996 -146987300 - L1Md_F2 LINE L1 -1 6581 5866 2 735 311 96 6 3 chrX 19663001 19663058 -146987238 - L1_Mm LINE L1 -729 5442 5358 2 735 305 198 112 97 chrX 19663060 19663194 -146987102 - L1MC LINE L1 -2990 3156 3021 2 735 257 169 16 48 chrX 19663286 19663348 -146986948 + CT-rich Low_complexity Low_complexity 2 61 0 2 735 249 232 36 0 chrX 19663353 19663409 -146986887 - ID4_ SINE ID -24 59 2 2 735 3275 62 3 3 chrX 19663531 19663922 -146986374 - L1_Mus2 LINE L1 -15 6551 6161 2 735 835 275 119 38 chrX 19663932 19664447 -146985849 - L1MD2 LINE L1 -3329 3208 2606 2 735 3178 35 0 0 chrX 19664447 19664792 -146985504 - ORR1A1 LTR MaLR 0 346 2 2 735 835 245 76 54 chrX 19664792 19664818 -146985478 - L1MD2 LINE L1 -3932 2605 2582 2 735 441 253 0 0 chrX 19664818 19664897 -146985399 + ID4 SINE ID 1 79 -4 2 735 835 285 90 27 chrX 19664897 19665325 -146984971 - L1MD2 LINE L1 -3956 2581 2136 2 735 529 332 116 12 chrX 19665326 19665567 -146984729 + B4A SINE B4 1 266 -26 2 735 1001 256 101 108 chrX 19665657 19666075 -146984221 - L1MD2 LINE L1 -4486 2147 1727 2 735 336 360 0 0 chrX 19666075 19666175 -146984121 - PB1D10 SINE Alu -17 100 1 2 735 1001 256 101 108 chrX 19666175 19666424 -146983872 - L1MD2 LINE L1 -4907 1726 1473 2 735 584 195 115 15 chrX 19666424 19666554 -146983742 - B1_Mur1 SINE Alu -4 145 3 2 735 1001 256 101 108 chrX 19666554 19666637 -146983659 - L1MD2 LINE L1 -5161 1472 1401 2 735 419 211 91 9 chrX 19666643 19666753 -146983543 - B3 SINE B2 -2 214 96 2 735 322 249 106 17 chrX 19666824 19666903 -146983393 - L1MD2 LINE L1 -5248 1385 1308 2 735 379 321 0 18 chrX 19666903 19667014 -146983282 + PB1D10 SINE Alu 4 112 -5 2 735 255 249 106 17 chrX 19667014 19667114 -146983182 - L1MD2 LINE L1 -5326 1307 1191 2 735 1495 288 52 26 chrX 19667114 19667616 -146982680 - MT2A LTR ERVL 0 601 6 2 735 268 280 31 9 chrX 19667687 19667834 -146982462 - L1MD2 LINE L1 -5402 1138 978 2 735 277 183 117 0 chrX 19667870 19667930 -146982366 + MTC LTR MaLR 1 67 -354 2 735 2019 145 27 12 chrX 19667918 19668254 -146982042 - MTC LTR MaLR -13 408 68 2 735 2500 93 83 22 chrX 19668297 19668704 -146981592 - Lx LINE L1 -1 6653 6222 2 735 506 143 10 62 chrX 19668724 19668821 -146981475 + MTD LTR MaLR 328 419 0 2 735 189 0 0 0 chrX 19668934 19668955 -146981341 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2 735 342 302 62 0 chrX 19669182 19669277 -146981019 - PB1D7 SINE Alu 0 120 20 2 735 237 184 0 0 chrX 19669277 19669315 -146980981 - MLT2B3 LTR ERVL 0 554 517 2 735 329 291 104 0 chrX 19669333 19669467 -146980829 - MT2B LTR ERVL -137 464 317 2 735 378 82 0 0 chrX 19669461 19669510 -146980786 - MT2A LTR ERVL -453 80 32 2 735 312 180 82 0 chrX 19669550 19669611 -146980685 - B3A SINE B2 -104 94 29 2 735 378 0 0 0 chrX 19669769 19669811 -146980485 + (TATG)n Simple_repeat Simple_repeat 2 43 0 2 735 829 176 19 1 chrX 19669814 19669971 -146980325 - B2_Mm2 SINE B2 -47 169 1 2 735 208 0 62 0 chrX 19670063 19670095 -146980201 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 735 442 244 78 9 chrX 19670103 19670219 -146980077 - B1_Mus2 SINE Alu -19 128 5 2 735 438 284 14 7 chrX 19670362 19670504 -146979792 + L1_Rod LINE L1 5068 5210 -637 2 735 10980 144 37 69 chrX 19670549 19671886 -146978410 - L1_Mur3 LINE L1 -1120 4760 3474 2 735 266 0 29 0 chrX 19671886 19671920 -146978376 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 735 10980 144 37 69 chrX 19671920 19673146 -146977150 - L1_Mur3 LINE L1 -2407 3473 2279 2 735 1659 129 181 0 chrX 19673138 19673503 -146976793 - L1_Mur3 LINE L1 -4247 1633 1203 2 735 1259 199 86 12 chrX 19673505 19673831 -146976465 - L1_Mur3 LINE L1 -7313 415 66 2 735 1120 218 5 0 chrX 19674841 19675043 -146975253 - B3 SINE B2 -5 211 9 2 735 660 301 20 35 chrX 19675408 19675611 -146974685 - B3 SINE B2 -10 206 7 2 735 456 296 153 36 chrX 19675640 19675836 -146974460 - MER58A DNA MER1_type 0 224 6 2 735 27 29 0 0 chrX 19675990 19676024 -146974272 + AT_rich Low_complexity Low_complexity 1 34 0 2 735 279 0 0 0 chrX 19676719 19676750 -146973546 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2 735 1178 62 0 14 chrX 19680182 19680330 -146969966 + B1_Mm SINE Alu 1 146 -1 2 735 213 39 0 0 chrX 19681679 19681705 -146968591 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 2 735 819 286 0 0 chrX 19683436 19683618 -146966678 + B3A SINE B2 1 182 -16 2 735 907 226 179 29 chrX 19684199 19684445 -146965851 - B4A SINE B4 0 292 10 2 735 1270 102 0 39 chrX 19684602 19684805 -146965491 + B2_Mm2 SINE B2 1 195 0 2 735 327 121 0 0 chrX 19685642 19685700 -146964596 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 735 768 100 0 0 chrX 19685991 19686101 -146964195 + L1_Mus2 LINE L1 776 885 -5772 2 735 5252 42 2 0 chrX 19686112 19686837 -146963459 - L1Md_F2 LINE L1 -338 6244 5519 2 735 2538 56 6 0 chrX 19686839 19687161 -146963135 + L1Md_F2 LINE L1 6257 6580 -2 2 735 5755 62 8 3 chrX 19687166 19688069 -146962227 + MusHAL1 LINE L1 599 1503 -1850 2 735 29354 107 8 16 chrX 19688096 19691734 -146958562 + L1_Mus2 LINE L1 1099 4631 -1252 2 735 243 0 0 0 chrX 19691734 19691761 -146958535 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 735 29354 95 5 9 chrX 19691761 19693248 -146957048 + L1_Mus2 LINE L1 4632 6088 -478 2 735 319 186 51 0 chrX 19693313 19693372 -146956924 - PB1D10 SINE Alu -10 107 46 2 735 476 203 39 85 chrX 19693516 19693645 -146956651 - B1F SINE Alu 0 149 27 2 735 207 69 0 0 chrX 19693654 19693683 -146956613 + (CAT)n Simple_repeat Simple_repeat 1 29 0 2 735 911 217 11 11 chrX 19694294 19694480 -146955816 + ORR1D1 LTR MaLR 1 186 -188 2 735 535 171 51 0 chrX 19694484 19694642 -146955654 + CT-rich Low_complexity Low_complexity 1 166 0 2 735 797 151 121 66 chrX 19694642 19694840 -146955456 + ORR1D1 LTR MaLR 166 374 0 2 735 296 301 132 0 chrX 19694847 19694948 -146955348 - PB1D10 SINE Alu -22 127 6 2 735 412 313 156 83 chrX 19695305 19695823 -146954473 + L1ME3A LINE L1 159 714 -5528 2 735 1090 277 113 16 chrX 19695893 19696712 -146953584 + L1ME3A LINE L1 5037 5946 -248 2 735 235 291 54 119 chrX 19696828 19696996 -146953300 + YREP_Mm Unknown Unknown 138 294 -1518 2 735 621 264 7 7 chrX 19696879 19697020 -146953276 - ID_B1 SINE B4 -4 220 80 2 735 334 354 27 67 chrX 19697926 19698072 -146952224 + ID_B1 SINE B4 10 224 0 2 735 582 64 0 0 chrX 19698072 19698150 -146952146 + B1_Mur4 SINE Alu 73 150 0 2 735 302 179 71 0 chrX 19699304 19699360 -146950936 - HAL1-3A_ME LINE L1 -823 2035 1976 2 735 319 243 58 0 chrX 19699398 19699477 -146950819 - B3A SINE B2 -128 88 6 2 735 811 193 203 27 chrX 19699532 19699930 -146950366 - RCHARR1 DNA MER1_type 0 974 507 2 735 294 353 124 7 chrX 19700517 19700654 -146949642 + MIR SINE MIR 59 215 -53 2 735 477 329 42 98 chrX 19700658 19700894 -146949402 + MER21B LTR ERV1 12 234 -629 2 735 4561 155 62 73 chrX 19702219 19703119 -146947177 + RMER19B LTR ERVK 1 890 -12 2 735 1056 78 0 0 chrX 19703521 19703663 -146946633 + B1_Mus2 SINE Alu 1 142 -5 2 735 287 150 0 48 chrX 19703666 19703750 -146946546 + A-rich Low_complexity Low_complexity 1 80 0 3 735 932 244 15 5 chrX 19704100 19704306 -146945990 - B3 SINE B2 -6 210 3 3 735 246 239 0 0 chrX 19704454 19704500 -146945796 - RSINE1 SINE B4 -94 71 26 3 735 529 305 125 0 chrX 19705642 19705842 -146944454 + MLT1E2 LTR MaLR 386 610 -17 3 735 195 290 43 14 chrX 19706062 19706132 -146944164 + L2a LINE L2 3355 3426 0 3 735 610 214 32 0 chrX 19706236 19706362 -146943934 + B1_Mm SINE Alu 18 147 0 3 735 241 356 36 15 chrX 19708683 19708820 -146941476 + MIRb SINE MIR 79 218 -50 3 735 989 50 7 0 chrX 19709471 19709611 -146940685 + (TG)n Simple_repeat Simple_repeat 2 142 0 3 735 1131 279 42 4 chrX 19709611 19709870 -146940426 - B4 SINE B4 -23 269 1 3 735 646 293 103 41 chrX 19709899 19710247 -146940049 + MER31B LTR ERV1 1 465 -20 3 735 517 211 44 0 chrX 19711484 19711598 -146938698 - B1F2 SINE Alu 0 149 31 3 735 563 242 113 13 chrX 19711863 19712022 -146938274 + MER3 DNA MER1_type 13 187 -22 3 735 314 347 17 0 chrX 19712450 19712623 -146937673 + L1MC4 LINE L1 7359 7534 -508 3 735 201 215 60 30 chrX 19713182 19713249 -146937047 + L3 LINE CR1 2109 2177 -2312 3 735 255 333 0 0 chrX 19714302 19714362 -146935934 - ID4_ SINE ID -19 64 5 3 735 2590 197 2 16 chrX 19715089 19715579 -146934717 + Lx5 LINE L1 6478 6960 -90 3 735 22 0 0 0 chrX 19715883 19715905 -146934391 + AT_rich Low_complexity Low_complexity 1 22 0 3 735 408 294 13 99 chrX 19716822 19716973 -146933323 - MER20 DNA MER1_type -3 216 79 3 735 407 265 37 93 chrX 19717098 19717260 -146933036 + MER106A DNA MER1_type 2 154 -82 3 735 2031 151 42 5 chrX 19717271 19717766 -146932530 - RLTR20D LTR ERVK 0 568 1 3 735 275 369 38 7 chrX 19718237 19718385 -146931911 - MIRb SINE MIR -111 157 4 3 735 975 216 0 0 chrX 19718413 19718594 -146931702 + L1VL4 LINE L1 55 235 -6067 3 735 5471 118 3 38 chrX 19718597 19719525 -146930771 + L1VL4 LINE L1 20 915 -5387 3 735 2937 26 12 0 chrX 19719529 19719870 -146930426 + ORR1A0 LTR MaLR 2 346 0 3 735 14132 147 21 18 chrX 19719870 19720148 -146930148 + Lx LINE L1 3198 3470 -2407 3 735 2164 92 3 3 chrX 19720148 19720454 -146929842 + L1_Mus4 LINE L1 6328 6633 -3 3 735 14132 147 21 18 chrX 19720454 19721599 -146928697 + Lx LINE L1 3471 4631 -1246 3 735 234 0 0 0 chrX 19721599 19721625 -146928671 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 735 14132 147 21 18 chrX 19721625 19721720 -146928576 + Lx LINE L1 4632 4726 -1151 3 735 185 65 32 0 chrX 19721720 19721751 -146928545 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 735 14132 129 27 13 chrX 19721751 19723648 -146926648 + Lx LINE L1 4727 6651 -3 3 735 22 56 0 0 chrX 19723650 19723686 -146926610 + AT_rich Low_complexity Low_complexity 1 36 0 3 735 24 53 0 0 chrX 19724059 19724097 -146926199 + AT_rich Low_complexity Low_complexity 1 38 0 3 735 698 206 30 0 chrX 19724203 19724334 -146925962 + B1_Mur3 SINE Alu 3 137 -12 3 735 441 243 7 198 chrX 19724825 19724954 -146925342 + L1MD LINE L1 3115 3219 -2927 3 735 748 203 36 0 chrX 19724954 19725092 -146925204 + B1_Mur2 SINE Alu 1 143 -6 3 735 441 243 7 198 chrX 19725092 19725200 -146925096 + L1MD LINE L1 3220 3299 -2847 3 735 189 107 0 0 chrX 19725200 19725228 -146925068 + (TAA)n Simple_repeat Simple_repeat 1 28 0 3 735 441 243 7 198 chrX 19725228 19725287 -146925009 + L1MD LINE L1 3300 3355 -2791 3 735 361 94 0 36 chrX 19725301 19725356 -146924940 - MTC LTR MaLR -5 416 364 3 735 663 257 14 0 chrX 19725356 19725504 -146924792 + RMER10B LTR ERVL 203 352 -46 3 735 2129 154 34 62 chrX 19725524 19725714 -146924582 - MTC LTR MaLR -44 377 210 3 735 1137 74 0 7 chrX 19725714 19725725 -146924571 - B1_Mus1 SINE Alu 0 148 138 3 735 183 42 0 0 chrX 19725725 19725749 -146924547 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 735 1137 74 0 7 chrX 19725749 19725886 -146924410 - B1_Mus1 SINE Alu -11 137 1 3 735 2129 154 34 62 chrX 19725886 19726083 -146924213 - MTC LTR MaLR -212 209 1 3 735 878 114 101 82 chrX 19726229 19726448 -146923848 - Lx2A1 LINE L1 0 7008 6786 3 735 818 274 96 6 chrX 19726451 19726814 -146923482 + L1MD LINE L1 3523 3918 -2228 3 735 523 308 13 58 chrX 19726821 19726976 -146923320 + RSINE1 SINE B4 3 150 -15 3 735 4822 58 75 0 chrX 19727021 19727697 -146922599 + L1Md_F2 LINE L1 4860 5586 -297 3 735 8100 51 1 1 chrX 19727697 19728692 -146921604 + L1Md_F2 LINE L1 5587 6581 -1 3 735 326 314 36 86 chrX 19728705 19728855 -146921441 + L1MD LINE L1 3975 4130 -2016 3 735 3045 29 0 0 chrX 19728855 19729201 -146921095 + ORR1A0 LTR MaLR 1 346 0 3 735 326 309 37 87 chrX 19729201 19729397 -146920899 + L1MD LINE L1 4126 4299 -1841 3 735 431 259 79 21 chrX 19729391 19729580 -146920716 + L1MD2 LINE L1 4419 4618 -1528 3 735 327 269 140 37 chrX 19729591 19729694 -146920602 - PB1D10 SINE Alu 0 117 12 3 735 1558 82 14 0 chrX 19729748 19729967 -146920329 + BGLII LTR ERVK 200 421 0 3 735 794 321 35 16 chrX 19730024 19730494 -146919802 + L1MD2 LINE L1 5647 6124 -55 3 735 627 230 167 42 chrX 19730618 19730881 -146919415 + Arthur1 DNA Tip100 3423 3718 -229 3 735 823 345 57 0 chrX 19731455 19731756 -146918540 + MER2 DNA MER2_type 1 318 -27 3 735 374 274 24 0 chrX 19731828 19731912 -146918384 + ID_B1 SINE B4 6 91 -133 3 735 7880 68 4 5 chrX 19732604 19734333 -146915963 - L1Md_F2 LINE L1 -10 6572 4847 3 735 552 42 0 0 chrX 19735394 19735465 -146914831 + (TC)n Simple_repeat Simple_repeat 1 71 0 3 735 21 0 0 0 chrX 19735774 19735795 -146914501 + AT_rich Low_complexity Low_complexity 1 21 0 3 735 257 288 70 31 chrX 19736530 19736659 -146913637 + YREP_Mm Unknown Unknown 163 296 -1516 3 735 652 241 23 0 chrX 19736546 19736679 -146913617 - ID_B1 SINE B4 -7 217 82 3 735 189 0 0 0 chrX 19738169 19738190 -146912106 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 3 735 234 345 26 0 chrX 19738406 19738519 -146911777 + CT-rich Low_complexity Low_complexity 4 119 0 3 735 203 217 29 0 chrX 19739456 19739525 -146910771 + CT-rich Low_complexity Low_complexity 4 74 0 3 735 210 171 0 0 chrX 19739894 19739935 -146910361 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 3 735 900 170 7 0 chrX 19739945 19740086 -146910210 - B1_Mur3 SINE Alu -7 142 1 3 735 240 323 45 8 chrX 19740222 19740356 -146909940 + L1MB4 LINE L1 5962 6100 -80 3 735 679 256 24 42 chrX 19740373 19740540 -146909756 - RSINE1 SINE B4 0 165 2 3 735 236 333 16 0 chrX 19741083 19741146 -146909150 + Charlie5 DNA MER1_type 2 65 -2559 3 735 232 203 0 30 chrX 19741750 19741816 -146908480 - Lx8 LINE L1 -3 7470 7407 3 735 456 19 0 0 chrX 19742205 19742258 -146908038 + (GA)n Simple_repeat Simple_repeat 1 53 0 3 735 1448 285 54 10 chrX 19742324 19742711 -146907585 + Tigger7 DNA MER2_type 8 411 -2080 3 735 630 256 16 124 chrX 19742697 19742947 -146907349 + Tigger7 DNA MER2_type 2256 2477 -14 3 735 503 252 39 0 chrX 19743686 19743789 -146906507 - PB1D7 SINE Alu -11 109 3 3 735 1126 261 98 11 chrX 19743919 19744298 -146905998 - Charlie1b DNA MER1_type -97 426 15 3 735 335 339 9 9 chrX 19744320 19744436 -146905860 - MER20 DNA MER1_type 0 219 104 3 735 226 297 0 63 chrX 19744581 19744660 -146905636 + MLT1L LTR MaLR 525 598 -12 3 735 208 0 62 0 chrX 19744892 19744924 -146905372 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 735 247 212 37 12 chrX 19745058 19745139 -146905157 + (TTTG)n Simple_repeat Simple_repeat 2 84 0 3 735 785 134 0 0 chrX 19745151 19745263 -146905033 - B1_Mur4 SINE Alu -37 113 2 3 735 515 226 11 0 chrX 19745263 19745356 -146904940 - PB1D9 SINE Alu -26 94 1 3 735 1218 258 13 132 chrX 19745578 19745963 -146904333 + ORR1E LTR MaLR 5 343 -16 3 735 26 0 0 0 chrX 19746159 19746185 -146904111 + AT_rich Low_complexity Low_complexity 1 26 0 3 735 496 264 0 0 chrX 19746189 19746280 -146904016 + B1_Mur2 SINE Alu 5 95 -54 3 735 2461 132 58 24 chrX 19746319 19746770 -146903526 + RMER4A LTR ERVK 1 466 0 3 735 663 142 122 47 chrX 19746772 19746920 -146903376 + RMER4A LTR ERVK 308 466 0 3 735 4497 111 15 5 chrX 19747532 19748205 -146902091 + Lx3A LINE L1 6296 6975 -6 3 735 22 0 0 0 chrX 19748206 19748228 -146902068 + AT_rich Low_complexity Low_complexity 1 22 0 3 735 298 306 66 22 chrX 19748251 19748388 -146901908 - MIR SINE MIR 0 262 120 3 735 380 242 73 95 chrX 19748429 19748566 -146901730 - MLT1J2 LTR MaLR -38 410 274 3 735 267 31 0 0 chrX 19748566 19748598 -146901698 + (A)n Simple_repeat Simple_repeat 1 32 0 3 735 562 306 139 13 chrX 19748649 19748887 -146901409 - LTR33 LTR ERVL -2 513 246 3 735 1010 282 50 108 chrX 19749118 19749347 -146900949 - MTEa LTR MaLR -5 374 157 3 735 1194 50 0 0 chrX 19749347 19749487 -146900809 + B1_Mus2 SINE Alu 2 141 -6 3 735 645 49 0 0 chrX 19749489 19749570 -146900726 + (GAAA)n Simple_repeat Simple_repeat 2 82 0 3 735 1010 282 50 108 chrX 19749570 19749616 -146900680 - MTEa LTR MaLR -223 156 108 3 735 1410 85 19 0 chrX 19749616 19749828 -146900468 - L1_Mus3 LINE L1 -2 6636 6421 3 735 1010 282 50 108 chrX 19749828 19749945 -146900351 - MTEa LTR MaLR -272 107 1 3 735 250 358 76 40 chrX 19750618 19750749 -146899547 + MER67B LTR ERV1 282 415 -246 3 735 408 267 130 0 chrX 19750749 19750880 -146899416 + B1F SINE Alu 1 148 -1 3 735 250 358 76 40 chrX 19750880 19750972 -146899324 + MER67B LTR ERV1 416 512 -149 3 735 7931 71 8 14 chrX 19751231 19753086 -146897210 - L1_Mus1 LINE L1 0 6567 4713 3 735 589 333 65 29 chrX 19753086 19753361 -146896935 + LTR31 LTR ERV1 318 602 -17 3 735 197 83 0 27 chrX 19753363 19753400 -146896896 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 3 735 309 354 86 25 chrX 19754096 19754293 -146896003 - MIRb SINE MIR -39 229 21 3 735 402 275 119 16 chrX 19754420 19754605 -146895691 - MER3 DNA MER1_type -4 205 2 3 735 877 242 75 25 chrX 19754765 19755006 -146895290 - MER2 DNA MER2_type 0 345 93 3 735 234 62 0 0 chrX 19755018 19755050 -146895246 + (TTG)n Simple_repeat Simple_repeat 2 33 0 3 735 402 152 101 0 chrX 19755052 19755151 -146895145 - Lx9 LINE L1 -8 7636 7528 3 735 242 247 65 0 chrX 19755151 19755244 -146895052 + Lx9 LINE L1 7409 7507 -137 3 735 21 0 0 0 chrX 19755353 19755374 -146894922 + AT_rich Low_complexity Low_complexity 1 21 0 3 735 738 192 0 0 chrX 19755428 19755548 -146894748 - B3 SINE B2 -96 120 1 3 735 30566 89 18 10 chrX 19755956 19761267 -146889029 + L1Md_F2 LINE L1 240 5586 -297 4 735 7683 60 9 5 chrX 19761268 19762256 -146888040 + L1Md_F2 LINE L1 5588 6579 -3 4 735 591 235 62 112 chrX 19762265 19762639 -146887657 + L1MB2 LINE L1 5814 6168 -3 4 735 1345 262 54 23 chrX 19762653 19763004 -146887292 - ORR1D2 LTR MaLR -6 364 3 4 735 352 336 30 8 chrX 19763583 19763715 -146886581 - B1F SINE Alu -10 139 5 4 735 500 300 188 0 chrX 19763609 19763769 -146886527 - ID_B1 SINE B4 -34 190 1 4 735 212 163 39 39 chrX 19764268 19764319 -146885977 + (CATG)n Simple_repeat Simple_repeat 2 52 0 4 735 1280 274 111 69 chrX 19764914 19765770 -146884526 - L1MC3 LINE L1 -176 7609 6718 4 735 289 121 56 83 chrX 19765773 19765845 -146884451 + MER3 DNA MER1_type 135 204 -5 4 735 5233 60 23 1 chrX 19766874 19767557 -146882739 - L1_Mus3 LINE L1 -7 6631 5934 4 735 833 272 93 25 chrX 19767601 19768050 -146882246 + L1MA4 LINE L1 5696 6175 -125 4 735 339 130 0 0 chrX 19768085 19768139 -146882157 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 735 814 50 200 32 chrX 19768645 19768770 -146881526 - B1_Mur4 SINE Alu 0 150 5 4 735 681 259 0 95 chrX 19768878 19769057 -146881239 + RSINE1 SINE B4 2 163 -2 4 735 2323 145 46 5 chrX 19769466 19769860 -146880436 - MTC LTR MaLR -10 411 2 4 735 2944 76 5 8 chrX 19769945 19770342 -146879954 + MTA_Mm LTR MaLR 1 396 0 4 735 254 241 0 144 chrX 19770588 19770685 -146879611 - MIRc SINE MIR -14 254 172 4 735 247 342 13 0 chrX 19770724 19770803 -146879493 - ID4 SINE ID -2 81 2 4 735 406 283 30 5 chrX 19770803 19770915 -146879381 - B1F SINE Alu -7 113 1 4 735 221 281 99 49 chrX 19770921 19771063 -146879233 - MIRb SINE MIR -118 150 2 4 735 230 176 0 19 chrX 19771285 19771337 -146878959 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 4 735 344 254 92 21 chrX 19771454 19771595 -146878701 - L1MD3 LINE L1 -13 7982 7832 4 735 399 253 166 5 chrX 19771730 19771917 -146878379 - L1MD2 LINE L1 -280 6079 5863 4 735 1409 104 5 9 chrX 19772019 19772243 -146878053 - Lx2 LINE L1 0 6997 6775 4 735 1033 116 0 0 chrX 19772243 19772389 -146877907 - Lx2 LINE L1 -363 6634 6489 4 735 1311 52 36 0 chrX 19773027 19773220 -146877076 - MusHAL1 LINE L1 -627 2085 1886 4 735 374 103 0 0 chrX 19773221 19773279 -146877017 + BGLII_Mus LTR ERVK 1 58 -364 4 735 381 43 0 0 chrX 19773291 19773338 -146876958 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 735 1615 109 19 4 chrX 19773343 19773600 -146876696 + BGLII_Mus LTR ERVK 162 422 0 4 735 2978 199 102 58 chrX 19773979 19774978 -146875318 + RMER3D-int LTR ERVK 652 1694 -1148 4 735 2958 210 33 43 chrX 19774979 19775906 -146874390 + RMER3D-int LTR ERVK 1925 2842 0 4 735 2653 92 54 17 chrX 19775906 19776313 -146873983 + BGLII_Mus LTR ERVK 1 422 0 4 735 12219 86 14 7 chrX 19776313 19778939 -146871357 - L1VL2 LINE L1 -822 2793 153 4 735 320 302 60 75 chrX 19778943 19779119 -146871177 - L1MD2 LINE L1 -560 5799 5617 4 735 377 69 28 0 chrX 19779119 19779191 -146871105 + L1_Mus2 LINE L1 6493 6566 0 4 735 320 303 52 65 chrX 19779191 19779296 -146871000 - L1MD2 LINE L1 -743 5616 5522 4 735 1731 149 26 45 chrX 19779433 19779785 -146870511 + RMER1C Other Other 990 1334 -8 4 735 23 78 0 0 chrX 19780654 19780705 -146869591 + AT_rich Low_complexity Low_complexity 1 51 0 4 735 2831 44 0 27 chrX 19780871 19781242 -146869054 - L1Md_F3 LINE L1 0 6584 6224 4 735 524 80 0 0 chrX 19781310 19781385 -146868911 - L1VL2 LINE L1 -6136 199 125 4 735 233 353 98 0 chrX 19781448 19781550 -146868746 + PB1D10 SINE Alu 1 112 -5 4 735 966 106 0 28 chrX 19781779 19781924 -146868372 + B1_Mur3 SINE Alu 9 149 0 4 735 1376 37 0 0 chrX 19782025 19782188 -146868108 + B2_Mm1a SINE B2 2 164 -29 4 735 351 0 0 0 chrX 19782188 19782227 -146868069 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 4 735 369 0 0 0 chrX 19783400 19783441 -146866855 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 735 462 35 0 0 chrX 19784317 19784335 -146865961 + (TG)n Simple_repeat Simple_repeat 1 18 0 4 735 441 0 0 0 chrX 19784335 19784384 -146865912 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 735 462 35 0 0 chrX 19784384 19784423 -146865873 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 735 225 0 0 0 chrX 19784775 19784800 -146865496 + (TATG)n Simple_repeat Simple_repeat 4 28 0 4 735 228 200 13 67 chrX 19784805 19784830 -146865466 + polypurine Low_complexity Low_complexity 2 26 0 4 735 252 0 0 0 chrX 19784830 19784858 -146865438 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 735 228 200 13 67 chrX 19784858 19784907 -146865389 + polypurine Low_complexity Low_complexity 27 72 0 4 735 240 169 175 63 chrX 19785084 19785147 -146865149 - B4A SINE B4 -221 71 2 4 735 4885 40 8 13 chrX 19785603 19786205 -146864091 - L1_Mus1 LINE L1 0 6567 5969 4 735 664 208 106 58 chrX 19786308 19786497 -146863799 + B3A SINE B2 1 198 0 4 735 4733 55 10 0 chrX 19786836 19787417 -146862879 + LTRIS_Mus LTR ERV1 1 587 0 4 735 15122 119 31 9 chrX 19788533 19791787 -146858509 + L1Md_F LINE L1 264 3594 -2289 4 736 3780 40 2 7 chrX 19791977 19792465 -146857831 + L1_Mus1 LINE L1 6107 6567 0 4 736 582 15 0 0 chrX 19792482 19792549 -146857747 + (GGAAA)n Simple_repeat Simple_repeat 3 69 0 4 736 360 0 0 0 chrX 19792770 19792810 -146857486 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 736 423 0 0 0 chrX 19792810 19792856 -146857440 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 736 250 59 38 38 chrX 19793050 19793103 -146857193 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 4 736 1030 259 11 45 chrX 19793320 19793676 -146856620 + RLTR15 LTR ERVK 1 344 -15 4 736 312 359 8 0 chrX 19793816 19793933 -146856363 - L1M4b LINE L1 -7124 210 93 4 736 774 259 5 115 chrX 19794664 19794873 -146855423 + B4A SINE B4 2 187 -105 4 736 2945 94 2 2 chrX 19794873 19795311 -146854985 - L1_Mm LINE L1 -510 5373 4936 4 736 16163 83 4 4 chrX 19795309 19798423 -146851873 + L1_Mus1 LINE L1 3454 6567 0 4 736 645 271 142 79 chrX 19799094 19799447 -146850849 - MTE2a LTR MaLR 0 379 5 4 736 390 268 100 49 chrX 19799622 19799991 -146850305 + L1MC5 LINE L1 7520 7907 -54 4 736 2258 174 11 3 chrX 19801208 19801583 -146848713 + ORR1C1 LTR MaLR 1 378 0 4 736 468 0 0 0 chrX 19802038 19802090 -146848206 + (GA)n Simple_repeat Simple_repeat 2 53 0 4 736 1041 281 132 26 chrX 19802261 19802729 -146847567 + RMER5 LTR ERV1 1 518 -16 4 736 255 61 0 0 chrX 19803216 19803249 -146847047 + (TTTC)n Simple_repeat Simple_repeat 4 36 0 4 736 294 173 19 0 chrX 19804523 19804575 -146845721 - B4A SINE B4 -239 53 1 4 736 263 301 74 66 chrX 19804620 19804741 -146845555 - MLT1J LTR MaLR -16 496 375 4 736 539 281 35 52 chrX 19804764 19804937 -146845359 - MLT1J LTR MaLR -258 254 85 4 736 237 220 17 0 chrX 19805149 19805208 -146845088 - L1M5 LINE L1 -651 5793 5734 4 736 193 359 121 58 chrX 19805383 19805690 -146844606 - L4 LINE RTE -160 1869 1542 4 736 356 239 0 27 chrX 19805690 19805763 -146844533 + ID4_ SINE ID 3 73 -10 4 736 193 359 121 58 chrX 19805763 19805819 -146844477 - L4 LINE RTE -488 1541 1483 4 736 278 247 13 0 chrX 19806140 19806217 -146844079 - L1MA5 LINE L1 -34 6266 6189 4 736 791 204 0 0 chrX 19806254 19806396 -146843900 + B1_Mus2 SINE Alu 1 142 -5 4 736 5117 44 6 5 chrX 19806653 19807291 -146843005 + L1Md_F2 LINE L1 5940 6578 -4 4 736 589 256 0 12 chrX 19807316 19807482 -146842814 + Lx7 LINE L1 5816 5979 -1717 4 736 483 70 42 0 chrX 19808446 19808517 -146841779 + B2_Mm1t SINE B2 106 179 -14 4 736 360 76 352 9 chrX 19808560 19808665 -146841631 + B2_Mm2 SINE B2 46 186 -9 4 736 213 356 0 0 chrX 19809042 19809101 -146841195 + C-rich Low_complexity Low_complexity 5 63 0 4 736 336 64 0 0 chrX 19810150 19810197 -146840099 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 736 794 229 119 40 chrX 19810712 19810989 -146839307 + Lx8 LINE L1 7173 7471 -2 4 736 8034 82 18 7 chrX 19811008 19812138 -146838158 - Lx3_Mus LINE L1 0 7009 5868 4 736 19744 120 22 12 chrX 19812229 19814962 -146835334 + L1_Mus2 LINE L1 226 3055 -2828 4 736 2036 35 0 19 chrX 19814962 19815221 -146835075 + L1Md_F3 LINE L1 6317 6570 -14 4 736 19744 93 16 8 chrX 19815221 19816507 -146833789 + L1_Mus2 LINE L1 3056 4347 -1536 4 736 4247 76 7 10 chrX 19817549 19818163 -146832133 + L1_Mus2 LINE L1 4323 4934 -949 4 736 6720 34 6 9 chrX 19818165 19819024 -146831272 - L1Md_F3 LINE L1 -2 6582 5727 4 736 7084 77 2 1 chrX 19819008 19820621 -146829675 + L1_Mus2 LINE L1 4923 6536 -30 4 736 1261 53 6 0 chrX 19820621 19820791 -146829505 + L1_Mus1 LINE L1 6396 6566 -1 4 736 403 250 154 15 chrX 19820806 19820936 -146829360 + B1_Mur2 SINE Alu 2 149 0 4 736 9175 82 9 4 chrX 19821841 19823918 -146826378 - L1_Mus1 LINE L1 0 6654 4482 4 736 317 343 0 87 chrX 19823976 19824091 -146826205 + RSINE1 SINE B4 61 165 0 4 736 26 0 0 0 chrX 19824465 19824491 -146825805 + AT_rich Low_complexity Low_complexity 1 26 0 4 736 2727 76 42 10 chrX 19824655 19825039 -146825257 - MTA_Mm LTR MaLR 0 396 1 4 736 404 121 0 0 chrX 19825039 19825105 -146825191 - MTA_Mm-int LTR MaLR 0 1098 1033 4 736 243 188 78 0 chrX 19825115 19825179 -146825117 - L1M2 LINE L1 -3330 2813 2745 4 736 315 303 0 0 chrX 19826178 19826267 -146824029 + PB1D10 SINE Alu 27 115 -2 4 736 5468 75 36 7 chrX 19826409 19827893 -146822403 - L1VL2 LINE L1 -1789 1826 296 4 736 6096 109 28 80 chrX 19827893 19829005 -146821291 - MTB-int LTR MaLR -44 1054 1 4 736 3182 50 5 5 chrX 19829005 19829405 -146820891 - MTB LTR MaLR 0 400 1 4 736 422 353 110 49 chrX 19829540 19829987 -146820309 + L1MC LINE L1 5254 5727 -2155 4 736 1497 68 0 5 chrX 19830206 19830399 -146819897 + B2_Mm2 SINE B2 2 193 -2 4 736 362 336 17 8 chrX 19830545 19830665 -146819631 + PB1 SINE Alu 5 125 -2 4 736 22 0 0 0 chrX 19830705 19830727 -146819569 + AT_rich Low_complexity Low_complexity 1 22 0 4 736 438 326 155 30 chrX 19830801 19831098 -146819198 - L1MCc LINE L1 -5217 1206 873 4 736 670 112 43 94 chrX 19831339 19831477 -146818819 - B1_Mus1 SINE Alu 0 148 18 4 736 791 176 222 6 chrX 19831519 19831690 -146818606 + B3 SINE B2 4 211 -5 5 736 184 275 0 0 chrX 19831756 19831796 -146818500 + L3b LINE CR1 322 361 -121 5 736 350 279 25 0 chrX 19832900 19832979 -146817317 - ID4 SINE ID -2 81 1 5 736 1260 129 72 29 chrX 19833619 19833898 -146816398 + MYSERV16_I-int LTR ERVK 2036 2326 0 5 736 426 282 73 0 chrX 19833898 19834008 -146816288 + RLTR20B1 LTR ERVK 1 118 -445 5 736 22554 140 60 43 chrX 19834107 19836281 -146814015 + L1_Mus3 LINE L1 396 2715 -3168 5 736 590 208 30 102 chrX 19836281 19836330 -146813966 + ID_B1 SINE B4 43 224 -68 5 736 934 113 35 0 chrX 19836330 19836472 -146813824 + B1_Mus1 SINE Alu 1 147 -1 5 736 22554 140 60 43 chrX 19836472 19838709 -146811587 + L1_Mus3 LINE L1 2716 5104 -779 5 736 5886 49 1 29 chrX 19838709 19839470 -146810826 + L1Md_F2 LINE L1 5843 6582 0 5 736 22554 97 22 21 chrX 19839470 19841019 -146809277 + L1_Mus3 LINE L1 5105 6637 -1 5 736 471 301 45 6 chrX 19841982 19842159 -146808137 + L1ME1 LINE L1 109 292 -6108 5 736 552 288 196 9 chrX 19842289 19842867 -146807429 + L1ME1 LINE L1 490 1175 -5225 5 736 438 287 0 0 chrX 19842868 19842976 -146807320 + PB1D10 SINE Alu 2 109 -8 5 736 508 257 238 0 chrX 19843007 19843332 -146806964 + L1ME1 LINE L1 3787 4206 -2113 5 736 889 123 0 8 chrX 19843441 19843572 -146806724 + B1_Mur1 SINE Alu 20 149 0 5 736 1045 297 84 22 chrX 19843591 19844461 -146805835 + L1MD LINE L1 4174 5097 -1049 5 736 482 333 127 22 chrX 19844553 19844915 -146805381 + L1ME1 LINE L1 5730 6129 -223 5 736 288 0 0 0 chrX 19844957 19844989 -146805307 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 736 428 230 178 57 chrX 19845003 19845160 -146805136 - B3A SINE B2 -19 179 4 5 736 4430 230 70 29 chrX 19845257 19847411 -146802885 + Lx6 LINE L1 5161 7413 -47 5 736 346 332 98 106 chrX 19847593 19848133 -146802163 + MER68 LTR ERVL 3 550 -57 5 736 235 267 65 26 chrX 19848296 19848373 -146801923 + Charlie13a DNA Charlie 131 210 -1304 5 736 234 297 0 45 chrX 19848597 19848664 -146801632 - MLT1J LTR MaLR -324 188 125 5 736 819 33 0 47 chrX 19848948 19849075 -146801221 + L1Md_F2 LINE L1 6462 6582 0 5 736 391 197 0 0 chrX 19849287 19849358 -146800938 + B1_Mur3 SINE Alu 5 75 -74 5 736 268 272 0 58 chrX 19849358 19849373 -146800923 + B4 SINE B4 90 170 -122 5 736 289 302 140 56 chrX 19849373 19849587 -146800709 + L1MB5 LINE L1 272 503 -6104 5 736 947 310 77 56 chrX 19849594 19850120 -146800176 + L1MB5 LINE L1 1201 1759 -4990 5 736 964 221 25 5 chrX 19850120 19850320 -146799976 + B3 SINE B2 3 206 -10 5 736 947 310 77 56 chrX 19850320 19850736 -146799560 + L1MB5 LINE L1 1760 2163 -4586 5 736 1287 238 271 14 chrX 19850965 19851520 -146798776 + L1MB5 LINE L1 5780 6477 -298 5 736 183 175 0 0 chrX 19851600 19851615 -146798681 + A-rich Low_complexity Low_complexity 1 15 0 5 736 1247 41 0 0 chrX 19851615 19851762 -146798534 + B1_Mus2 SINE Alu 1 147 0 5 736 183 175 0 0 chrX 19851762 19851786 -146798510 + A-rich Low_complexity Low_complexity 16 39 0 5 736 423 302 88 15 chrX 19851786 19852058 -146798238 + L1MB4 LINE L1 5860 6151 -29 5 736 436 277 20 9 chrX 19852122 19852231 -146798065 + PB1D10 SINE Alu 15 116 -31 5 736 363 255 19 11 chrX 19852519 19852629 -146797667 - L2a LINE L2 -11 3415 3252 5 736 243 371 19 0 chrX 19853192 19853297 -146796999 + MIR SINE MIR 121 227 -35 5 736 395 310 60 72 chrX 19853498 19853665 -146796631 + B3A SINE B2 34 198 0 5 736 301 276 23 0 chrX 19853849 19853936 -146796360 - MER5A1 DNA MER1_type -75 91 3 5 736 437 284 223 4 chrX 19854115 19854362 -146795934 + MLT1J1 LTR MaLR 1 301 -143 5 736 234 0 0 0 chrX 19854616 19854642 -146795654 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 736 423 0 0 0 chrX 19854642 19854688 -146795608 + (GA)n Simple_repeat Simple_repeat 1 47 0 5 736 626 343 17 11 chrX 19854732 19854912 -146795384 - B4A SINE B4 -111 181 1 5 736 2088 79 78 62 chrX 19854940 19855262 -146795034 + ORR1A2 LTR MaLR 1 327 0 5 736 744 232 22 0 chrX 19855271 19855409 -146794887 - ID_B1 SINE B4 0 224 84 5 736 233 29 0 29 chrX 19855515 19855550 -146794746 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 736 1167 57 0 0 chrX 19855552 19855692 -146794604 - B1_Mus2 SINE Alu -6 141 2 5 736 744 260 90 5 chrX 19855801 19856002 -146794294 - ID_B1 SINE B4 -5 219 2 5 736 1947 84 115 0 chrX 19856092 19856378 -146793918 - ORR1A2 LTR MaLR -8 319 1 5 736 764 115 282 0 chrX 19857079 19857253 -146793043 + URR1B DNA MER1_type 1 223 -2 5 736 242 245 0 0 chrX 19857299 19857352 -146792944 - Lx9 LINE L1 -740 6904 6852 5 736 6526 155 25 10 chrX 19857505 19858588 -146791708 + Lx5 LINE L1 5936 7034 -16 5 736 225 0 0 0 chrX 19858588 19858613 -146791683 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 5 736 291 54 0 0 chrX 19859026 19859063 -146791233 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 736 354 228 13 0 chrX 19859375 19859454 -146790842 - ID4_ SINE ID -2 81 2 5 736 357 315 35 7 chrX 19859461 19859605 -146790691 - B1F SINE Alu 0 149 2 5 736 1193 48 7 0 chrX 19859838 19859984 -146790312 + B1_Mm SINE Alu 1 147 0 5 736 403 286 93 26 chrX 19860429 19860580 -146789716 - MIR SINE MIR -85 177 17 5 736 804 293 84 58 chrX 19860659 19861003 -146789293 + MTEa LTR MaLR 13 365 -14 5 736 216 0 0 0 chrX 19861003 19861027 -146789269 + (TC)n Simple_repeat Simple_repeat 1 24 0 5 736 327 25 0 0 chrX 19861044 19861084 -146789212 + (TC)n Simple_repeat Simple_repeat 1 40 0 5 736 270 0 0 0 chrX 19861084 19861113 -146789183 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 736 1365 283 68 28 chrX 19861126 19861584 -146788712 + MTE-int LTR MaLR 3 478 -1102 5 736 28 0 0 0 chrX 19861661 19861689 -146788607 + AT_rich Low_complexity Low_complexity 1 28 0 5 736 1428 73 10 10 chrX 19861698 19861892 -146788404 + B2_Mm2 SINE B2 1 194 -1 5 736 761 278 0 21 chrX 19861896 19862087 -146788209 + B3A SINE B2 9 195 -3 5 736 710 178 0 37 chrX 19862125 19862259 -146788037 + B1_Mur4 SINE Alu 1 129 -21 5 736 1342 285 138 88 chrX 19862377 19862640 -146787656 + MTE-int LTR MaLR 834 1149 -431 5 736 1086 110 0 0 chrX 19862640 19862786 -146787510 + B1_Mus2 SINE Alu 2 147 0 5 736 1342 285 138 88 chrX 19862786 19863114 -146787182 + MTE-int LTR MaLR 1150 1455 -125 5 736 640 297 119 68 chrX 19863174 19863295 -146787001 + MTEa LTR MaLR 59 174 -205 5 736 1612 42 0 0 chrX 19863295 19863488 -146786808 + B2_Mm1a SINE B2 1 193 0 5 736 640 297 119 68 chrX 19863488 19863659 -146786637 + MTEa LTR MaLR 175 366 -13 5 736 2920 23 3 0 chrX 19863891 19864233 -146786063 + L1_Mus1 LINE L1 6225 6567 0 5 736 831 249 92 11 chrX 19865104 19865376 -146784920 + L1MA4A LINE L1 5634 5927 -376 5 736 877 170 133 5 chrX 19865455 19865650 -146784646 + URR1A DNA MER1_type 1 220 -6 5 736 535 215 95 15 chrX 19866573 19866710 -146783586 + B1F SINE Alu 1 148 -1 5 736 308 141 31 0 chrX 19867430 19867494 -146782802 + CT-rich Low_complexity Low_complexity 3 68 0 5 736 252 0 0 0 chrX 19868268 19868296 -146782000 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 736 233 217 0 0 chrX 19868714 19868760 -146781536 + (CAG)n Simple_repeat Simple_repeat 1 46 0 5 736 219 167 0 0 chrX 19869391 19869433 -146780863 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 736 515 219 24 63 chrX 19870476 19870603 -146779693 + PB1 SINE Alu 3 124 -3 5 736 483 314 214 23 chrX 19870605 19870993 -146779303 + L1MD2 LINE L1 97 558 -5989 5 736 420 20 0 0 chrX 19870997 19871046 -146779250 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 736 417 302 34 0 chrX 19871270 19871389 -146778907 + B1F SINE Alu 20 142 -7 5 736 278 348 0 0 chrX 19871418 19871533 -146778763 + L1MD2 LINE L1 902 1016 -5531 5 736 782 93 152 0 chrX 19871572 19871690 -146778606 - B1_Mus1 SINE Alu 0 148 13 5 736 321 311 91 0 chrX 19871734 19871866 -146778430 + L1MD2 LINE L1 1111 1254 -5293 5 736 192 40 0 0 chrX 19871868 19871893 -146778403 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 5 736 363 113 158 49 chrX 19871908 19872018 -146778278 - B2_Mm2 SINE B2 -7 186 47 5 736 1103 105 28 34 chrX 19872050 19872228 -146778068 - B2_Mm1t SINE B2 -14 179 3 5 736 382 254 14 125 chrX 19872257 19872275 -146778021 + MT2B LTR ERVL 152 276 -322 5 736 776 187 0 0 chrX 19872275 19872398 -146777898 + B1_Mur4 SINE Alu 1 123 -27 5 736 483 296 69 19 chrX 19872426 19872746 -146777550 + L1MD2 LINE L1 1282 1617 -5023 5 736 673 255 144 17 chrX 19872988 19873335 -146776961 + L1MD2 LINE L1 3963 4353 -2191 5 736 1083 70 21 7 chrX 19873355 19873500 -146776796 + B1_Mus1 SINE Alu 2 148 0 5 736 217 113 81 0 chrX 19873727 19873789 -146776507 + (TATAA)n Simple_repeat Simple_repeat 4 70 0 5 736 361 219 34 26 chrX 19873790 19873907 -146776389 + L1MD2 LINE L1 4846 4963 -1581 5 736 378 0 0 0 chrX 19873913 19873955 -146776341 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 736 30 27 0 0 chrX 19873955 19873992 -146776304 + AT_rich Low_complexity Low_complexity 1 37 0 5 736 440 301 48 0 chrX 19874135 19874219 -146776077 + L1MD2 LINE L1 5351 5436 -1108 5 736 207 0 0 0 chrX 19874219 19874242 -146776054 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 736 440 301 48 0 chrX 19874242 19874363 -146775933 + L1MD2 LINE L1 5437 5564 -980 5 736 338 231 62 80 chrX 19874456 19874569 -146775727 - PB1D9 SINE Alu 0 120 10 5 736 428 235 97 10 chrX 19874620 19874723 -146775573 - PB1D9 SINE Alu -8 112 1 5 736 309 331 65 53 chrX 19874852 19875021 -146775275 + L1MC2 LINE L1 5929 6099 -245 5 736 3518 73 28 2 chrX 19875136 19875486 -146774810 - L1_Mm LINE L1 -284 5599 5249 5 736 342 0 0 0 chrX 19875486 19875524 -146774772 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 736 3518 73 28 2 chrX 19875524 19875677 -146774619 - L1_Mm LINE L1 -635 5248 5084 5 736 6805 72 2 2 chrX 19875676 19876608 -146773688 + L1_Mus2 LINE L1 5625 6556 -10 5 736 292 353 29 22 chrX 19876908 19877047 -146773249 - LTR33A_ LTR ERVL -8 523 384 5 736 2652 90 10 0 chrX 19877157 19877544 -146772752 - L1_Mus3 LINE L1 -2 5881 5491 5 736 4337 91 35 5 chrX 19877554 19878184 -146772112 + L1_Mus3 LINE L1 5989 6637 -1 5 736 300 315 100 75 chrX 19878344 19878640 -146771656 + LTR33A LTR ERVL 245 684 -111 5 736 287 296 110 81 chrX 19879067 19879203 -146771093 - MER2 DNA MER2_type 0 345 206 5 736 444 311 89 103 chrX 19879209 19879568 -146770728 + ORR1E LTR MaLR 1 354 -5 5 736 338 238 124 0 chrX 19879571 19879676 -146770620 - MER2 DNA MER2_type -146 199 82 5 736 501 109 54 11 chrX 19879750 19879843 -146770453 - Lx3A LINE L1 -6 6975 6879 5 736 613 80 35 9 chrX 19880082 19880196 -146770100 - L1_Mus3 LINE L1 -4 6634 6518 5 736 286 271 0 0 chrX 19880324 19880383 -146769913 + L2b LINE L2 3315 3373 -2 5 736 2017 132 7 111 chrX 19880903 19881287 -146769009 + RMER10B LTR ERVL 1 343 -55 5 736 1437 34 79 0 chrX 19881287 19881305 -146768991 - B2_Mm1a SINE B2 0 193 176 6 736 237 65 0 0 chrX 19881305 19881336 -146768960 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 6 736 1437 34 79 0 chrX 19881336 19881495 -146768801 - B2_Mm1a SINE B2 -18 175 3 6 736 2017 132 7 111 chrX 19881495 19881543 -146768753 + RMER10B LTR ERVL 344 388 -10 5 736 646 83 303 0 chrX 19881866 19881975 -146768321 - B1_Mus1 SINE Alu -5 143 2 6 736 245 367 11 0 chrX 19883024 19883114 -146767182 - MLT1J LTR MaLR -309 203 113 6 736 390 276 85 165 chrX 19883316 19883728 -146766568 + RMER10A LTR ERVL 10 388 -54 6 736 23 0 0 0 chrX 19883728 19883751 -146766545 + AT_rich Low_complexity Low_complexity 1 23 0 6 736 1272 87 48 5 chrX 19883763 19883949 -146766347 + B2_Mm2 SINE B2 2 195 0 6 736 341 247 222 0 chrX 19884031 19884193 -146766103 + L1MB5 LINE L1 5967 6164 -10 6 736 343 247 141 61 chrX 19884984 19885083 -146765213 + B3 SINE B2 2 108 -108 6 736 201 102 39 39 chrX 19885197 19885248 -146765048 + (TTTG)n Simple_repeat Simple_repeat 1 51 0 6 736 1115 64 14 0 chrX 19885250 19885390 -146764906 - B1_Mus1 SINE Alu -5 143 2 6 736 593 369 67 50 chrX 19885426 19885828 -146764468 + MLT1J LTR MaLR 102 510 -2 6 736 1175 103 48 11 chrX 19886103 19886290 -146764006 - L1Md_F2 LINE L1 -1 6581 6388 6 736 987 231 23 53 chrX 19886417 19886682 -146763614 + RLTR40 LTR ERVK 50 306 -511 6 736 772 139 25 111 chrX 19887011 19887173 -146763123 - B1_Mur3 SINE Alu 0 149 2 6 736 946 239 113 67 chrX 19887175 19887609 -146762687 + RLTR40 LTR ERVK 302 755 -62 6 736 3926 182 89 87 chrX 19887609 19887721 -146762575 - RMER1A Other Other -10 1020 871 6 736 474 18 0 0 chrX 19887721 19887776 -146762520 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 736 4300 182 89 87 chrX 19887776 19888681 -146761615 - RMER1A Other Other -160 870 2 6 736 569 272 75 113 chrX 19888715 19888997 -146761299 + ORR1E LTR MaLR 55 325 -34 6 736 534 198 0 28 chrX 19889135 19889244 -146761052 - B1_Mur4 SINE Alu -2 148 43 6 736 1118 145 0 30 chrX 19889253 19889623 -146760673 + (TCTCTG)n Simple_repeat Simple_repeat 1 358 0 6 736 332 185 19 0 chrX 19889626 19889680 -146760616 - B1_Mus1 SINE Alu -93 55 1 6 736 186 133 0 0 chrX 19889814 19889844 -146760452 + (TTG)n Simple_repeat Simple_repeat 3 32 0 6 736 287 308 94 55 chrX 19889848 19890137 -146760159 - MTEb LTR MaLR -20 359 55 6 736 677 154 222 0 chrX 19890155 19890272 -146760024 - B1_Mus1 SINE Alu -3 145 3 6 736 10704 59 0 1 chrX 19890328 19891646 -146758650 + L1_Mm LINE L1 4271 5586 -297 6 736 8455 53 5 1 chrX 19891646 19892626 -146757670 + L1Md_F2 LINE L1 5587 6570 -12 6 736 467 362 66 59 chrX 19892804 19893077 -146757219 - MLT1H LTR MaLR -3 546 272 6 736 227 315 127 18 chrX 19893108 19893218 -146757078 - MLT1H LTR MaLR -337 212 91 6 736 261 133 0 0 chrX 19893541 19893548 -146756748 + (TA)n Simple_repeat Simple_repeat 1 7 0 6 736 609 52 0 0 chrX 19893548 19893625 -146756671 + (TG)n Simple_repeat Simple_repeat 2 78 0 6 736 261 133 0 0 chrX 19893625 19893662 -146756634 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 736 395 174 14 0 chrX 19893963 19894032 -146756264 + MTEa LTR MaLR 287 356 -23 6 736 236 307 155 17 chrX 19894089 19894205 -146756091 - MLT1H LTR MaLR -166 323 192 6 736 1289 28 0 0 chrX 19894266 19894408 -146755888 + B1_Mus1 SINE Alu 1 142 -6 6 736 279 0 0 0 chrX 19894410 19894441 -146755855 + (TAA)n Simple_repeat Simple_repeat 2 32 0 6 736 294 246 104 9 chrX 19894441 19894544 -146755752 - MLT1H LTR MaLR -376 173 6 6 736 337 254 0 27 chrX 19894635 19894707 -146755589 + B3A SINE B2 1 70 -128 6 736 337 254 0 27 chrX 19894707 19894779 -146755517 + B3A SINE B2 1 70 -128 6 736 689 268 92 0 chrX 19894779 19894932 -146755364 + B3A SINE B2 1 167 -31 6 736 28 48 0 0 chrX 19894955 19894997 -146755299 + AT_rich Low_complexity Low_complexity 1 42 0 6 736 459 0 0 0 chrX 19895218 19895269 -146755027 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 736 566 241 18 0 chrX 19895273 19895385 -146754911 - B1_Mur1 SINE Alu -12 137 24 6 736 449 200 19 0 chrX 19895385 19895490 -146754806 + (CATATA)n Simple_repeat Simple_repeat 3 109 0 6 736 234 333 25 62 chrX 19895600 19895680 -146754616 + ID4_ SINE ID 1 77 -6 6 736 1637 177 90 6 chrX 19895748 19896060 -146754236 + ORR1B2 LTR MaLR 29 366 -1 6 736 733 179 0 12 chrX 19896257 19896421 -146753875 + CT-rich Low_complexity Low_complexity 2 163 0 6 736 7415 101 18 87 chrX 19896436 19897662 -146752634 - Lx3C LINE L1 -9 6967 5827 6 736 285 146 0 0 chrX 19897662 19897710 -146752586 + (T)n Simple_repeat Simple_repeat 1 48 0 6 736 456 257 144 11 chrX 19897896 19898077 -146752219 + MTD LTR MaLR 213 417 -2 6 736 23 33 0 0 chrX 19898151 19898181 -146752115 + AT_rich Low_complexity Low_complexity 1 30 0 6 736 180 219 0 0 chrX 19898213 19898254 -146752042 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 736 1399 116 227 48 chrX 19898338 19898629 -146751667 - L1_Mur2 LINE L1 -137 5740 5398 6 736 3096 67 15 3 chrX 19898631 19899020 -146751276 - L1Md_F2 LINE L1 -13 6569 6176 6 736 915 55 142 0 chrX 19899020 19899147 -146751149 - Lx3A LINE L1 -1150 5831 5687 6 736 212 231 0 0 chrX 19899187 19899226 -146751070 + B3A SINE B2 2 40 -158 6 736 1273 228 63 37 chrX 19899227 19899438 -146750858 + Lx9 LINE L1 7252 7477 -167 6 736 255 61 0 0 chrX 19899438 19899471 -146750825 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 736 1273 228 63 37 chrX 19899471 19899583 -146750713 + Lx9 LINE L1 7478 7597 -47 6 736 1228 55 7 0 chrX 19899583 19899728 -146750568 + B1_Mm SINE Alu 2 147 0 6 736 189 0 0 0 chrX 19899730 19899751 -146750545 + (GA)n Simple_repeat Simple_repeat 2 22 0 6 736 2572 60 119 11 chrX 19899755 19900107 -146750189 + RLTR10 LTR ERVK 1 390 0 6 736 1273 228 63 37 chrX 19900107 19900156 -146750140 + Lx9 LINE L1 7598 7642 -2 6 736 23 0 0 0 chrX 19900195 19900218 -146750078 + AT_rich Low_complexity Low_complexity 1 23 0 6 736 871 229 60 22 chrX 19900409 19900420 -146749876 + B3 SINE B2 27 36 -180 6 736 1308 116 11 0 chrX 19900420 19900609 -146749687 + B2_Mm1a SINE B2 1 191 -2 6 736 871 229 60 22 chrX 19900609 19900780 -146749516 + B3 SINE B2 37 216 0 6 736 25 31 0 0 chrX 19900781 19900813 -146749483 + AT_rich Low_complexity Low_complexity 1 32 0 6 736 1788 21 0 0 chrX 19900888 19901081 -146749215 + B2_Mm1t SINE B2 1 193 0 6 736 196 246 121 15 chrX 19901274 19901340 -146748956 - MIRb SINE MIR -3 265 193 6 736 661 258 34 101 chrX 19901457 19901664 -146748632 - B3A SINE B2 -2 196 4 6 736 357 203 0 13 chrX 19901788 19901863 -146748433 - ORR1E LTR MaLR 0 379 306 6 736 207 0 0 0 chrX 19901864 19901887 -146748409 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 736 1305 41 0 7 chrX 19901910 19902058 -146748238 - B1_Mus2 SINE Alu 0 147 1 6 736 679 339 10 83 chrX 19902070 19902382 -146747914 - ORR1E LTR MaLR -70 289 1 6 736 227 190 0 17 chrX 19902397 19902456 -146747840 + (TTA)n Simple_repeat Simple_repeat 1 58 0 6 736 380 241 24 194 chrX 19902457 19902568 -146747728 + B1F SINE Alu 1 95 -54 6 736 1062 161 117 20 chrX 19902568 19902765 -146747531 + B3 SINE B2 1 216 0 6 736 380 241 24 194 chrX 19902765 19902823 -146747473 + B1F SINE Alu 96 141 -8 6 736 189 0 0 0 chrX 19902979 19903000 -146747296 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 6 736 4824 143 35 92 chrX 19903032 19903675 -146746621 - RMER19B LTR ERVK -12 890 242 6 736 186 43 0 0 chrX 19903675 19903698 -146746598 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 736 4824 143 35 92 chrX 19903698 19903998 -146746298 - RMER19B LTR ERVK -661 241 2 6 736 1540 234 88 18 chrX 19904001 19904445 -146745851 + L1MC1 LINE L1 5734 6208 -125 6 736 3966 236 24 7 chrX 19904430 19905291 -146745005 - Lx8 LINE L1 -374 7099 6224 6 736 3443 104 8 35 chrX 19905354 19905842 -146744454 - MT2C_Mm LTR ERVL 0 475 1 6 736 749 209 120 5 chrX 19906243 19906435 -146743861 - MTD LTR MaLR 0 419 206 6 736 9210 81 32 2 chrX 19906436 19908417 -146741879 + L1_Mus1 LINE L1 4529 6567 0 6 736 1170 54 20 0 chrX 19908674 19908822 -146741474 + L1_Mus3 LINE L1 5860 6010 -628 6 736 274 214 0 35 chrX 19908915 19908973 -146741323 + B1_Mur4 SINE Alu 5 60 -90 6 736 248 324 0 0 chrX 19908976 19909081 -146741215 + GA-rich Low_complexity Low_complexity 75 179 0 6 736 591 131 0 0 chrX 19909097 19909181 -146741115 + B1_Mus2 SINE Alu 42 125 -22 6 736 1157 69 0 6 chrX 19909181 19909342 -146740954 + (GGA)n Simple_repeat Simple_repeat 3 162 0 6 736 911 256 45 16 chrX 19909360 19909607 -146740689 + MTC LTR MaLR 124 421 0 6 736 1017 276 127 9 chrX 19909712 19910059 -146740237 + MLT1G LTR MaLR 204 591 0 6 736 215 340 9 37 chrX 19911586 19911693 -146738603 + MIRc SINE MIR 163 266 -2 6 736 666 263 10 10 chrX 19911846 19912042 -146738254 - L1MB3 LINE L1 -54 6129 5934 6 736 1778 211 102 41 chrX 19912038 19912498 -146737798 + Lx2B LINE L1 6511 6998 -2 6 736 394 310 7 7 chrX 19912497 19912640 -146737656 - L1MB3 LINE L1 -313 5870 5728 6 736 1242 188 63 30 chrX 19913406 19913674 -146736622 - MTD LTR MaLR -2 417 141 6 736 485 195 23 0 chrX 19913657 19913744 -146736552 + B1F2 SINE Alu 60 148 -1 6 736 944 46 87 58 chrX 19913750 19913888 -146736408 + B1_Mus1 SINE Alu 2 143 -5 6 736 438 317 49 22 chrX 19913910 19914094 -146736202 + ORR1E LTR MaLR 1 189 -170 6 736 7314 117 20 7 chrX 19914311 19915617 -146734679 - Lx LINE L1 -1 6653 5325 6 736 799 191 0 8 chrX 19915619 19915751 -146734545 - B1_Mur2 SINE Alu -17 132 2 6 736 24 32 0 0 chrX 19915879 19915910 -146734386 + AT_rich Low_complexity Low_complexity 1 31 0 6 736 604 281 96 0 chrX 19915986 19916132 -146734164 - RSINE1 SINE B4 -4 161 2 6 736 194 283 83 0 chrX 19916182 19916242 -146734054 - MIRc SINE MIR -116 152 88 6 736 1408 108 0 10 chrX 19917248 19917445 -146732851 - B2_Mm2 SINE B2 0 195 1 6 736 1510 69 26 5 chrX 19917474 19917664 -146732632 - B2_Mm2 SINE B2 0 195 2 6 736 581 260 136 23 chrX 19917666 19917843 -146732453 - B3A SINE B2 0 198 2 6 736 603 27 0 0 chrX 19917953 19918026 -146732270 + (TC)n Simple_repeat Simple_repeat 2 74 0 7 736 339 304 58 0 chrX 19918034 19918141 -146732155 - B1F1 SINE Alu -4 116 1 7 736 311 260 2 0 chrX 19918081 19918158 -146732138 - B4A SINE B4 -147 145 68 7 736 330 256 127 8 chrX 19918312 19918430 -146731866 + MLT1H LTR MaLR 57 188 -361 7 736 437 230 33 66 chrX 19918431 19918552 -146731744 + MT2B2 LTR ERVL 446 562 -22 7 736 1179 267 104 83 chrX 19918745 19919057 -146731239 - MT2B LTR ERVL 0 601 115 7 736 1194 100 0 6 chrX 19919057 19919218 -146731078 + B2_Mm2 SINE B2 2 161 -34 7 736 360 0 0 0 chrX 19919219 19919259 -146731037 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 7 736 1789 57 0 0 chrX 19919259 19919471 -146730825 + L1Md_F2 LINE L1 6359 6570 -12 7 736 1179 267 104 83 chrX 19919471 19919501 -146730795 - MT2B LTR ERVL -488 113 81 7 736 744 12 0 0 chrX 19919501 19919586 -146730710 + (GAAA)n Simple_repeat Simple_repeat 4 88 0 7 736 1179 267 104 83 chrX 19919586 19919668 -146730628 - MT2B LTR ERVL -521 80 4 7 736 236 257 147 37 chrX 19919668 19919776 -146730520 + MLT1E1A LTR MaLR 561 680 0 7 736 211 390 7 60 chrX 19919953 19920103 -146730193 + MIRb SINE MIR 79 220 -48 7 736 255 319 66 53 chrX 19920191 19920343 -146729953 + L2c LINE L2 3233 3386 -1 7 736 205 140 35 0 chrX 19921117 19921174 -146729122 + T-rich Low_complexity Low_complexity 3 61 0 7 736 327 347 0 8 chrX 19921203 19921322 -146728974 + L2a LINE L2 1898 2015 -1404 7 736 561 65 0 107 chrX 19921697 19921800 -146728496 + L1Md_F3 LINE L1 6492 6583 -1 7 736 353 316 174 92 chrX 19922001 19922415 -146727881 + RLTR24 LTR ERV1 1 448 -81 7 11 928 256 22 119 chrX 19922643 19922954 -146727342 + MTE2a LTR MaLR 1 281 -98 7 737 895 129 8 0 chrX 19923008 19923155 -146727141 - B1_Mur1 SINE Alu -1 148 1 7 737 1062 288 4 0 chrX 19923155 19923382 -146726914 - B4A SINE B4 -63 229 2 7 737 946 327 33 40 chrX 19923482 19923593 -146726703 - L1MDb LINE L1 -5081 1466 1355 7 737 815 163 45 75 chrX 19923593 19923736 -146726560 - B2_Mm2 SINE B2 0 195 57 7 737 898 125 70 0 chrX 19923736 19923864 -146726432 + B1_Mus1 SINE Alu 2 138 -10 7 737 210 37 0 0 chrX 19923864 19923891 -146726405 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 737 815 163 45 75 chrX 19923891 19923945 -146726351 - B2_Mm2 SINE B2 -139 56 4 7 737 946 329 40 37 chrX 19923945 19924445 -146725851 - L1MDb LINE L1 -5193 1354 839 7 737 245 349 15 30 chrX 19924697 19924796 -146725500 - L1MDb LINE L1 -6330 310 214 7 737 186 43 0 0 chrX 19924796 19924819 -146725477 + (CAA)n Simple_repeat Simple_repeat 2 24 0 7 737 245 349 15 30 chrX 19924819 19924852 -146725444 - L1MDb LINE L1 -6427 213 181 7 737 559 243 33 59 chrX 19924866 19925019 -146725277 - B1F SINE Alu 0 149 1 7 737 352 361 153 28 chrX 19925431 19925891 -146724405 + L2a LINE L2 2489 3021 -398 7 737 1013 224 52 98 chrX 19925891 19925933 -146724363 - ORR1D2 LTR MaLR -1 369 328 7 737 1241 75 0 0 chrX 19925933 19926080 -146724216 + B1_Mus2 SINE Alu 1 147 0 7 737 1013 224 52 98 chrX 19926080 19926424 -146723872 - ORR1D2 LTR MaLR -43 327 1 7 737 352 364 95 39 chrX 19926424 19926538 -146723758 + L2a LINE L2 3022 3129 -297 7 737 317 218 39 129 chrX 19926602 19926778 -146723518 - MLT1H2 LTR MaLR -24 525 353 7 737 1557 17 0 0 chrX 19926786 19926966 -146723330 + (TTC)n Simple_repeat Simple_repeat 1 180 0 7 737 244 310 141 31 chrX 19926974 19927137 -146723159 - MLT1H2 LTR MaLR -353 226 46 7 737 434 299 102 64 chrX 19927227 19927384 -146722912 - RSINE1 SINE B4 0 165 3 7 737 997 93 156 19 chrX 19927401 19927555 -146722741 - B2_Mm2 SINE B2 -19 176 2 7 737 1772 16 0 25 chrX 19927593 19927789 -146722507 + B2_Mm1a SINE B2 2 192 -1 7 737 471 256 191 22 chrX 19927807 19927917 -146722379 + B3 SINE B2 53 188 -28 7 737 270 0 0 0 chrX 19927917 19927947 -146722349 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 7 737 471 256 191 22 chrX 19927947 19927972 -146722324 + B3 SINE B2 189 211 -5 7 737 231 274 55 0 chrX 19928008 19928081 -146722215 + L2a LINE L2 3327 3403 -23 7 737 336 280 18 1 chrX 19928215 19928339 -146721957 + L1M2 LINE L1 4496 4620 -1520 7 737 665 231 0 82 chrX 19928339 19928485 -146721811 - B1_Mur1 SINE Alu -8 141 8 7 737 197 208 0 14 chrX 19928515 19928588 -146721708 + (TA)n Simple_repeat Simple_repeat 2 73 0 7 737 180 0 0 0 chrX 19928788 19928808 -146721488 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 7 737 1108 90 13 0 chrX 19928811 19928966 -146721330 - B2_Mm2 SINE B2 -38 157 1 7 737 743 311 123 23 chrX 19929248 19929424 -146720872 - MLT1C LTR MaLR -21 446 265 7 737 1186 48 0 70 chrX 19929424 19929582 -146720714 - B1_Mm SINE Alu 0 147 1 7 737 743 311 123 23 chrX 19929582 19929794 -146720502 - MLT1C LTR MaLR -203 264 19 7 737 950 233 11 0 chrX 19930171 19930360 -146719936 + B3A SINE B2 2 192 -6 7 737 354 250 0 0 chrX 19930435 19930503 -146719793 - ID4 SINE ID -14 69 2 7 737 995 60 103 22 chrX 19930541 19930677 -146719619 - B1_Mus1 SINE Alu 0 148 2 7 737 217 316 0 0 chrX 19930678 19930735 -146719561 - RSINE1 SINE B4 -46 119 63 7 737 287 261 126 119 chrX 19930754 19930950 -146719346 - RSINE1 SINE B4 -118 174 2 7 737 193 0 29 59 chrX 19930956 19930990 -146719306 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 7 737 306 323 0 21 chrX 19930990 19931074 -146719222 - B4 SINE B4 -209 83 1 7 737 243 270 98 33 chrX 19931085 19931177 -146719119 - PB1D10 SINE Alu -6 111 14 7 737 1243 183 34 0 chrX 19931950 19932158 -146718138 - B3 SINE B2 0 216 2 7 737 489 198 0 44 chrX 19932169 19932259 -146718037 - B1_Mur3 SINE Alu -44 105 20 7 737 300 343 19 77 chrX 19932289 19932444 -146717852 + Arthur1A DNA Tip100 23 168 -9 7 737 406 277 0 29 chrX 19932836 19932940 -146717356 - PB1D10 SINE Alu -5 112 12 7 737 1556 53 26 5 chrX 19933039 19933229 -146717067 - B2_Mm2 SINE B2 -1 194 1 7 737 264 239 96 55 chrX 19933392 19933538 -146716758 + L1_Mur3 LINE L1 47 198 -7530 7 737 3254 149 60 50 chrX 19933606 19934631 -146715665 + L1_Mur3 LINE L1 859 1875 -4005 7 737 185 0 40 0 chrX 19934634 19934659 -146715637 + (TTTTTG)n Simple_repeat Simple_repeat 5 30 0 7 737 1017 39 0 23 chrX 19934659 19934789 -146715507 - B1_Mus1 SINE Alu 0 148 22 7 737 563 174 41 61 chrX 19934664 19934811 -146715485 - ID_B1 SINE B4 -2 222 79 7 737 4550 57 37 2 chrX 19934826 19935367 -146714929 + LTRIS2 LTR ERV1 5 564 0 7 737 278 204 48 3 chrX 19935367 19935446 -146714850 + L1_Mur3 LINE L1 1973 2057 -3823 7 737 468 291 94 34 chrX 19935571 19935797 -146714499 + MLT1H1 LTR MaLR 14 263 -292 7 737 396 284 74 92 chrX 19935831 19935994 -146714302 + MLT1H1 LTR MaLR 417 576 -3 7 737 2587 83 3 33 chrX 19936367 19936704 -146713592 + ORR1A2 LTR MaLR 1 327 0 7 737 11832 127 74 10 chrX 19936704 19938550 -146711746 + ORR1A2-int LTR MaLR 1 1963 0 7 737 2456 92 38 3 chrX 19938550 19938866 -146711430 + ORR1A2 LTR MaLR 1 327 0 7 737 279 136 0 0 chrX 19939240 19939299 -146710997 + (CAGAGA)n Simple_repeat Simple_repeat 4 62 0 7 737 349 233 115 13 chrX 19939301 19939405 -146710891 + PB1 SINE Alu 6 120 -7 7 737 284 261 9 127 chrX 19939442 19939552 -146710744 + BC1_Mm scRNA scRNA 10 106 -46 7 737 305 258 180 0 chrX 19939624 19939713 -146710583 - PB1D10 SINE Alu -12 105 1 7 737 1422 82 11 6 chrX 19939898 19940081 -146710215 + B2_Mm2 SINE B2 2 185 -10 7 737 755 240 60 0 chrX 19941079 19941229 -146709067 + B3 SINE B2 2 160 -56 7 737 921 120 0 0 chrX 19942565 19942707 -146707589 + (TA)n Simple_repeat Simple_repeat 2 143 0 7 737 308 169 220 0 chrX 19943314 19943373 -146706923 - ID4_ SINE ID -8 75 4 7 737 360 239 223 27 chrX 19943605 19943717 -146706579 - ID_B1 SINE B4 0 224 91 7 737 494 288 8 0 chrX 19943727 19943859 -146706437 - B1F1 SINE Alu -12 137 5 7 737 368 217 28 19 chrX 19944055 19944163 -146706133 + Lx9 LINE L1 7389 7497 -147 7 737 235 129 87 19 chrX 19944252 19944355 -146705941 + (TA)n Simple_repeat Simple_repeat 1 110 0 7 737 401 167 125 0 chrX 19944370 19944442 -146705854 - ID4_ SINE ID -1 82 2 7 737 223 256 129 122 chrX 19945274 19945421 -146704875 + B1F SINE Alu 2 149 0 7 737 641 310 68 34 chrX 19945907 19946158 -146704138 - MLT1A0 LTR MaLR -27 552 318 7 737 672 250 24 109 chrX 19946275 19946486 -146703810 - B3A SINE B2 -4 194 2 7 737 755 277 63 104 chrX 19947432 19947764 -146702532 - MLT1A0 LTR MaLR -14 351 31 7 737 455 225 0 0 chrX 19947764 19947844 -146702452 + ID4_ SINE ID 3 82 -1 7 737 755 277 63 104 chrX 19947844 19947877 -146702419 - MLT1A0 LTR MaLR -335 30 1 7 737 219 36 0 0 chrX 19947963 19947991 -146702305 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 737 263 282 36 60 chrX 19948474 19948557 -146701739 - ID4_ SINE ID 0 83 3 7 737 860 178 166 6 chrX 19948662 19948843 -146701453 + B3 SINE B2 2 211 -5 7 737 822 202 58 6 chrX 19948997 19949171 -146701125 - B3A SINE B2 -15 183 1 7 737 25 31 0 0 chrX 19949289 19949321 -146700975 + AT_rich Low_complexity Low_complexity 1 32 0 7 737 290 354 24 0 chrX 19949452 19949534 -146700762 - B1F1 SINE Alu -65 84 1 7 737 992 231 55 0 chrX 19949562 19949761 -146700535 - B3 SINE B2 -6 210 1 7 737 722 322 54 21 chrX 19949937 19949997 -146700299 - B4 SINE B4 0 292 229 7 737 1323 51 0 0 chrX 19949997 19950290 -146700006 + (CA)n Simple_repeat Simple_repeat 1 293 0 7 737 722 322 54 21 chrX 19950290 19950469 -146699827 - B4 SINE B4 -64 228 45 7 737 327 240 0 0 chrX 19950515 19950590 -146699706 - PB1D10 SINE Alu 0 117 43 7 737 274 243 39 91 chrX 19950846 19950923 -146699373 - PB1D7 SINE Alu -1 119 47 7 737 593 240 90 5 chrX 19951047 19951197 -146699099 - B3A SINE B2 -6 187 27 7 737 1212 41 7 0 chrX 19951224 19951370 -146698926 - B1_Mm SINE Alu 0 147 1 7 737 432 0 0 0 chrX 19952207 19952255 -146698041 + (TC)n Simple_repeat Simple_repeat 2 49 0 7 737 246 292 29 58 chrX 19952270 19952283 -146698013 - tRNA-Ala-GCY_ tRNA tRNA 0 75 9 7 737 252 286 36 0 chrX 19952283 19952339 -146697957 - ID4_ SINE ID -11 72 15 7 737 508 99 135 0 chrX 19952674 19952785 -146697511 - Lx2 LINE L1 0 6997 6872 7 737 234 302 32 0 chrX 19952881 19952944 -146697352 - ID4_ SINE ID -16 67 3 7 737 408 184 111 10 chrX 19953024 19953123 -146697173 - PB1D7 SINE Alu -11 109 1 7 737 1426 58 16 0 chrX 19953556 19953744 -146696552 + B2_Mm1t SINE B2 1 191 -2 7 737 1211 21 0 7 chrX 19955486 19955632 -146694664 + B1_Mus1 SINE Alu 2 146 -2 7 737 223 170 0 0 chrX 19955633 19955680 -146694616 + (CAA)n Simple_repeat Simple_repeat 2 48 0 8 737 328 246 89 110 chrX 19955906 19956052 -146694244 - B1F2 SINE Alu -5 144 1 8 737 302 284 47 47 chrX 19956603 19956710 -146693586 - MIR SINE MIR -140 122 16 8 737 267 222 32 0 chrX 19956887 19956950 -146693346 + RMER15 LTR ERVL 403 467 -108 8 737 618 165 172 8 chrX 19958206 19958334 -146691962 - B1_Mur4 SINE Alu 0 150 2 8 737 186 188 0 0 chrX 19958376 19958408 -146691888 + MIR SINE MIR 78 109 -153 8 737 25 0 0 0 chrX 19958574 19958599 -146691697 + AT_rich Low_complexity Low_complexity 1 25 0 8 737 1217 79 79 0 chrX 19959312 19959490 -146690806 + B2_Mm1t SINE B2 1 192 -1 8 737 213 39 0 0 chrX 19959630 19959656 -146690640 + (CCCCCG)n Simple_repeat Simple_repeat 4 29 0 8 737 247 181 11 67 chrX 19960646 19960735 -146689561 + (ATGGTG)n Simple_repeat Simple_repeat 6 89 0 8 737 200 111 28 0 chrX 19960981 19961017 -146689279 + (GAAAA)n Simple_repeat Simple_repeat 3 39 0 8 737 367 223 34 43 chrX 19961845 19961952 -146688344 + L1MC4 LINE L1 6903 7011 -1031 8 737 240 273 15 15 chrX 19961952 19962019 -146688277 + ID4_ SINE ID 1 67 -16 8 737 604 217 143 27 chrX 19962660 19962807 -146687489 + RSINE1 SINE B4 2 165 0 8 737 180 77 0 0 chrX 19962812 19962838 -146687458 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 8 737 608 84 12 6 chrX 19962920 19963021 -146687275 - B1_Mur4 SINE Alu 0 150 17 8 737 761 236 80 5 chrX 19963078 19963278 -146687018 + B3 SINE B2 2 216 0 8 737 758 290 52 28 chrX 19963447 19963660 -146686636 - MER20 DNA MER1_type 0 219 2 8 737 239 415 22 22 chrX 19963807 19963945 -146686351 + MER5B DNA MER1_type 5 142 -36 8 737 189 309 61 12 chrX 19964018 19964100 -146686196 - L2 LINE L2 -486 2933 2848 8 737 1078 248 114 2 chrX 19964117 19964513 -146685783 - L1MD3 LINE L1 -1 7994 7555 8 737 456 263 32 0 chrX 19964609 19964704 -146685592 - RSINE1 SINE B4 -21 144 47 8 737 315 192 75 75 chrX 19964761 19964868 -146685428 - L1MA9 LINE L1 0 6312 6206 8 737 273 98 0 0 chrX 19964918 19964959 -146685337 + (TATG)n Simple_repeat Simple_repeat 2 42 0 8 737 458 252 41 69 chrX 19964969 19965114 -146685182 - RSINE1 SINE B4 -22 143 3 8 737 382 171 17 22 chrX 19965114 19965224 -146685072 - L1MA9 LINE L1 -133 6158 6051 8 737 369 0 0 0 chrX 19965526 19965567 -146684729 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 737 375 23 0 0 chrX 19965567 19965610 -146684686 + (GA)n Simple_repeat Simple_repeat 1 44 0 8 737 386 197 15 0 chrX 19965612 19965678 -146684618 - PB1D9 SINE Alu -5 115 49 8 737 1320 66 27 11 chrX 19965715 19965899 -146684397 - B2_Mm2 SINE B2 -7 188 2 8 737 913 224 97 12 chrX 19965925 19966173 -146684123 - L1MA9 LINE L1 -663 5649 5381 8 737 276 180 98 10 chrX 19966216 19966331 -146683965 - L1MEc LINE L1 -2974 3345 3222 8 737 1360 69 26 5 chrX 19966333 19966523 -146683773 + B2_Mm2 SINE B2 2 195 0 8 737 454 257 113 20 chrX 19966579 19966774 -146683522 + MER82 DNA MER2_type 301 513 -140 8 737 271 220 0 0 chrX 19966928 19966987 -146683309 - L1MEc LINE L1 -3158 3161 3103 8 737 564 282 51 0 chrX 19967001 19967157 -146683139 + MER58A DNA MER1_type 46 209 -15 8 737 309 279 47 0 chrX 19967217 19967303 -146682993 + B1F SINE Alu 55 144 -5 8 737 888 136 6 11 chrX 19967336 19967514 -146682782 + GA-rich Low_complexity Low_complexity 1 177 0 8 737 554 276 158 0 chrX 19967564 19967716 -146682580 + B3A SINE B2 1 176 -22 8 737 678 275 140 19 chrX 19967747 19968433 -146681863 - L1MEc LINE L1 -3392 2927 2146 8 737 311 311 72 18 chrX 19968484 19968651 -146681645 - L1MEc LINE L1 -4332 2068 1893 8 737 185 176 0 0 chrX 19968666 19968700 -146681596 - L2 LINE L2 -566 2853 2820 8 737 1282 77 55 0 chrX 19969346 19969528 -146680768 + B2_Mm1t SINE B2 2 193 0 8 737 222 173 0 39 chrX 19969556 19969634 -146680662 + GA-rich Low_complexity Low_complexity 2 76 0 8 737 214 208 19 0 chrX 19969802 19969855 -146680441 + T-rich Low_complexity Low_complexity 1 54 0 8 737 298 164 151 0 chrX 19969869 19969942 -146680354 - B1_Mur1 SINE Alu -22 127 44 8 737 347 330 126 68 chrX 19969953 19970366 -146679930 + L1MC5 LINE L1 6796 7232 -729 8 737 265 198 126 11 chrX 19970489 19970576 -146679720 + L1MC5 LINE L1 7274 7370 -591 8 737 432 91 34 11 chrX 19970623 19970712 -146679584 + L1Md_F3 LINE L1 6491 6581 -3 8 737 255 213 26 39 chrX 19970713 19970791 -146679505 - MTEb LTR MaLR -22 357 281 8 737 324 0 0 0 chrX 19971658 19971694 -146678602 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 8 737 5223 112 80 8 chrX 19971694 19972540 -146677756 - L1VL4 LINE L1 -5367 935 29 8 737 1245 27 0 0 chrX 19972994 19973141 -146677155 - B1_Mus2 SINE Alu 0 147 1 8 737 1210 41 0 20 chrX 19973651 19973801 -146676495 + B1_Mus2 SINE Alu 1 147 0 8 737 396 59 0 0 chrX 19973803 19973854 -146676442 + (GGA)n Simple_repeat Simple_repeat 2 52 0 8 737 237 65 0 0 chrX 19973921 19973952 -146676344 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 737 536 246 42 0 chrX 19974128 19974270 -146676026 + B1F SINE Alu 2 149 0 8 737 709 179 0 39 chrX 19974537 19974665 -146675631 + B3 SINE B2 87 209 -7 8 737 430 281 10 10 chrX 19975432 19975529 -146674767 + PB1 SINE Alu 1 97 -30 8 737 1151 48 7 0 chrX 19975708 19975854 -146674442 + B1_Mus2 SINE Alu 1 147 0 8 737 24 53 0 0 chrX 19977211 19977249 -146673047 + AT_rich Low_complexity Low_complexity 1 38 0 8 737 509 196 75 0 chrX 19977611 19977727 -146672569 + B1F SINE Alu 2 143 -6 8 737 1244 20 0 0 chrX 19978079 19978225 -146672071 + B1_Mus2 SINE Alu 2 147 0 8 737 962 282 40 31 chrX 19978305 19978656 -146671640 + Lx8 LINE L1 6914 7267 -206 8 737 1147 89 71 0 chrX 19979137 19979305 -146670991 + B2_Mm2 SINE B2 2 181 -14 8 737 761 261 28 51 chrX 19979396 19979472 -146670824 + Lx8 LINE L1 6939 7014 -459 8 737 1732 10 0 0 chrX 19979472 19979664 -146670632 + B2_Mm1t SINE B2 1 192 -1 8 737 761 261 28 51 chrX 19979664 19979801 -146670495 + Lx8 LINE L1 7015 7147 -326 8 737 294 235 14 29 chrX 19979796 19979866 -146670430 + Lx8 LINE L1 7088 7156 -317 8 737 755 178 59 0 chrX 19979974 19980109 -146670187 + B1_Mus1 SINE Alu 1 143 -5 8 737 561 99 0 0 chrX 19980113 19980194 -146670102 + (TA)n Simple_repeat Simple_repeat 1 81 0 8 737 248 311 35 107 chrX 19980322 19980491 -146669805 + MTEa LTR MaLR 201 357 -22 8 737 272 96 130 37 chrX 19981168 19981222 -146669074 - ID4 SINE ID -3 80 22 8 737 189 334 14 31 chrX 19981267 19981358 -146668938 - MIRm SINE MIR -106 170 82 8 737 408 40 0 0 chrX 19981445 19981495 -146668801 + (CA)n Simple_repeat Simple_repeat 2 51 0 8 737 22 35 0 0 chrX 19982236 19982265 -146668031 + AT_rich Low_complexity Low_complexity 1 29 0 8 737 963 181 110 0 chrX 19982268 19982450 -146667846 - B3 SINE B2 -10 206 5 8 737 367 277 19 38 chrX 19982641 19982746 -146667550 + PB1D10 SINE Alu 12 114 -3 8 737 481 238 172 0 chrX 19982806 19982928 -146667368 - B1_Mur1 SINE Alu -6 143 1 8 737 1437 51 0 6 chrX 19983815 19983993 -146666303 - B2_Mm2 SINE B2 -18 177 1 8 737 224 313 15 15 chrX 19984237 19984305 -146665991 + ID4_ SINE ID 5 72 -11 8 737 229 200 171 79 chrX 19984771 19984847 -146665449 + MIRc SINE MIR 124 206 -62 8 737 381 347 111 67 chrX 19985133 19985519 -146664777 - MLT1J LTR MaLR -97 415 13 8 737 1256 88 28 6 chrX 19985854 19986036 -146664260 - B2_Mm2 SINE B2 -9 186 1 8 737 568 302 99 55 chrX 19987292 19987565 -146662731 - MLT2C1 LTR ERVL -112 285 1 8 737 252 361 50 0 chrX 19987939 19988058 -146662238 + MIRb SINE MIR 98 222 -46 8 737 343 314 29 0 chrX 19988136 19988241 -146662055 + PB1D10 SINE Alu 2 109 -8 8 737 582 15 0 0 chrX 19988438 19988505 -146661791 + (TG)n Simple_repeat Simple_repeat 1 67 0 8 737 803 253 0 0 chrX 19988917 19989075 -146661221 - RSINE1 SINE B4 -6 159 2 8 737 3914 104 89 8 chrX 19989091 19989711 -146660585 - Lx4A LINE L1 -1 7057 6388 8 737 238 267 17 0 chrX 19989842 19989902 -146660394 - ORR1D2 LTR MaLR -53 306 246 8 737 247 290 130 9 chrX 19989998 19990106 -146660190 - ORR1D2 LTR MaLR -242 128 8 8 737 926 80 32 0 chrX 19990640 19990765 -146659531 - B1_Mus2 SINE Alu -18 129 1 8 737 649 277 14 0 chrX 19991150 19991291 -146659005 + B1F1 SINE Alu 5 147 -2 8 737 398 256 0 25 chrX 19991301 19991381 -146658915 + ID4_ SINE ID 2 79 -4 8 737 1328 111 5 0 chrX 19991417 19991606 -146658690 + B2_Mm1t SINE B2 2 191 -2 8 737 409 316 64 52 chrX 19991656 19991923 -146658373 + L1MDa LINE L1 61 330 -6303 8 737 420 308 142 94 chrX 19992237 19992679 -146657617 + L1MDa LINE L1 416 975 -5658 8 737 1019 283 177 52 chrX 19992909 19993446 -146656850 + L1MDa LINE L1 1679 2256 -4377 8 737 290 327 8 34 chrX 19993446 19993563 -146656733 + PB1D7 SINE Alu 1 114 -6 8 737 1019 268 137 30 chrX 19993563 19994438 -146655858 + L1MDa LINE L1 2257 3295 -3242 8 737 1099 82 0 7 chrX 19994442 19994590 -146655706 + B1_Mm SINE Alu 1 147 0 8 737 321 186 0 0 chrX 19994593 19994663 -146655633 + A-rich Low_complexity Low_complexity 1 70 0 8 737 372 257 115 22 chrX 19994683 19994822 -146655474 + L1MDa LINE L1 3324 3475 -3062 8 737 671 255 7 0 chrX 19994822 19994967 -146655329 + RSINE1 SINE B4 3 148 -17 8 737 202 200 0 0 chrX 19994997 19995032 -146655264 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 8 737 421 163 50 30 chrX 19995061 19995162 -146655134 + Lx9 LINE L1 7532 7634 -10 8 737 1121 63 14 0 chrX 19995215 19995357 -146654939 + B1_Mus1 SINE Alu 1 144 -4 8 737 237 33 0 0 chrX 19995357 19995387 -146654909 + (CAGAGA)n Simple_repeat Simple_repeat 1 30 0 8 737 519 257 146 28 chrX 19995387 19995675 -146654621 + L1MDa LINE L1 3692 4013 -2524 8 737 1608 261 140 14 chrX 19995678 19996163 -146654133 - MER68 LTR ERVL 0 563 18 8 737 1486 63 5 0 chrX 19996181 19996371 -146653925 + B2_Mm1t SINE B2 1 191 -2 8 737 305 343 9 0 chrX 19996395 19996500 -146653796 - MER68 LTR ERVL -390 173 68 8 737 273 206 0 16 chrX 19996524 19996588 -146653708 + L1MC LINE L1 3621 3683 -2463 9 737 487 269 25 69 chrX 19996840 19997000 -146653296 + RSINE1 SINE B4 1 153 -12 9 737 766 84 9 9 chrX 19997100 19997208 -146653088 - LTRIS2 LTR ERV1 0 564 457 9 737 558 78 0 0 chrX 19997207 19997284 -146653012 - LTRIS2 LTR ERV1 -239 325 249 9 737 486 193 266 12 chrX 19997285 19997357 -146652939 - MMERGLN-int LTR ERV1 -6948 608 526 9 737 185 0 40 0 chrX 19997357 19997382 -146652914 + (CAA)n Simple_repeat Simple_repeat 2 27 0 9 737 486 193 266 12 chrX 19997382 19997482 -146652814 - MMERGLN-int LTR ERV1 -7031 525 392 9 737 659 162 506 0 chrX 19997519 19997721 -146652575 - MMERGLN-int LTR ERV1 -7253 303 1 9 737 723 54 0 0 chrX 19997728 19997820 -146652476 + (GGGAGA)n Simple_repeat Simple_repeat 3 94 0 9 737 557 200 104 0 chrX 19997824 19997939 -146652357 - B1_Mur2 SINE Alu -22 127 1 9 737 21 0 0 0 chrX 19997943 19997964 -146652332 + AT_rich Low_complexity Low_complexity 1 21 0 9 737 542 305 165 0 chrX 19997966 19998202 -146652094 + B4A SINE B4 2 276 -16 9 737 216 263 18 0 chrX 19998219 19998276 -146652020 + (CA)n Simple_repeat Simple_repeat 1 58 0 9 737 245 234 109 0 chrX 19998345 19998409 -146651887 + PB1D9 SINE Alu 50 120 0 9 737 332 179 177 10 chrX 19998460 19998556 -146651740 + L1MDa LINE L1 4235 4346 -2191 8 737 612 83 0 0 chrX 19998569 19998653 -146651643 + BC1_Mm scRNA scRNA 1 84 -68 9 737 726 287 44 90 chrX 19998653 19999462 -146650834 + L1MDa LINE L1 4348 5056 -1481 8 737 617 208 0 16 chrX 19999467 19999589 -146650707 + PB1D9 SINE Alu 1 120 0 9 737 1149 68 0 0 chrX 19999592 19999739 -146650557 + B1_Mus2 SINE Alu 1 147 0 9 737 207 182 0 0 chrX 19999785 19999829 -146650467 + (CCA)n Simple_repeat Simple_repeat 3 46 0 9 737 245 255 181 7 chrX 19999859 19999997 -146650299 + L1MDa LINE L1 5048 5209 -1328 8 737 494 295 69 11 chrX 20000034 20000182 -146650114 + L1MD LINE L1 4866 5023 -1123 1 737 1571 22 6 0 chrX 20000182 20000361 -146649935 + B2_Mm1t SINE B2 2 181 -12 2 737 315 0 0 0 chrX 20000361 20000396 -146649900 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 3 737 494 295 69 11 chrX 20000396 20000520 -146649776 + L1MD LINE L1 5024 5153 -993 1 737 305 197 66 0 chrX 20000606 20000682 -146649614 + L1MD LINE L1 5279 5359 -1000 1 737 297 100 0 0 chrX 20000692 20000742 -146649554 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 737 444 292 66 0 chrX 20000750 20000856 -146649440 - RSINE1 SINE B4 -49 116 4 5 737 405 282 50 54 chrX 20000949 20001170 -146649126 + L1MD2 LINE L1 6078 6297 -62 6 737 25 53 0 18 chrX 20001183 20001213 -146649083 + AT_rich Low_complexity Low_complexity 1 30 0 7 737 1215 42 0 0 chrX 20001213 20001357 -146648939 - B1_Mus1 SINE Alu 0 148 5 8 737 25 53 0 18 chrX 20001357 20001383 -146648913 + AT_rich Low_complexity Low_complexity 1 26 0 9 737 321 191 85 5 chrX 20001821 20001934 -146648362 - B1_Mur3 SINE Alu 0 149 23 1 737 358 288 88 47 chrX 20001928 20002099 -146648197 - MLT2C1 LTR ERVL -207 190 13 1 737 198 118 0 0 chrX 20002558 20002592 -146647704 + (GGGTG)n Simple_repeat Simple_repeat 3 36 0 1 737 180 0 0 0 chrX 20003769 20003789 -146646507 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1 737 1236 41 0 0 chrX 20005609 20005756 -146644540 - B1_Mm SINE Alu 0 147 1 1 737 436 219 0 0 chrX 20005843 20005916 -146644380 - ID4_ SINE ID -4 79 7 1 737 944 126 73 28 chrX 20006369 20006520 -146643776 + B2_Mm2 SINE B2 1 161 -34 1 737 311 0 0 25 chrX 20006520 20006560 -146643736 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 1 737 944 126 73 28 chrX 20006560 20006587 -146643709 + B2_Mm2 SINE B2 162 187 -8 1 737 1332 77 22 6 chrX 20006597 20006780 -146643516 + B2_Mm2 SINE B2 1 186 -9 1 737 328 310 30 15 chrX 20006989 20007033 -146643263 - B1_Mur3 SINE Alu -2 147 104 1 737 1186 75 0 0 chrX 20007033 20007180 -146643116 - B1_Mm SINE Alu 0 147 1 2 737 395 208 3 25 chrX 20007180 20007266 -146643030 - PB1D10 SINE Alu -46 103 15 1 737 321 318 120 13 chrX 20007398 20007548 -146642748 - L1MC4 LINE L1 -2 8040 7875 2 737 1153 69 0 0 chrX 20007800 20007945 -146642351 - B1_Mus2 SINE Alu -2 145 1 2 737 326 236 79 0 chrX 20007959 20008048 -146642248 - L1MEg LINE L1 -4145 1939 1844 2 737 316 219 146 0 chrX 20008105 20008201 -146642095 - L2c LINE L2 -1 3386 3277 2 737 343 248 158 0 chrX 20008390 20008491 -146641805 + MIRb SINE MIR 31 147 -121 2 737 1379 82 5 0 chrX 20009384 20009568 -146640728 + B2_Mm1t SINE B2 4 188 -5 2 737 7446 68 1 4 chrX 20009893 20011023 -146639273 - L1Md_F2 LINE L1 0 6582 5455 2 737 1340 75 40 0 chrX 20011030 20011204 -146639092 - B2_Mm2 SINE B2 -14 181 1 2 737 21 36 0 0 chrX 20011286 20011314 -146638982 + AT_rich Low_complexity Low_complexity 1 28 0 2 737 1082 50 35 7 chrX 20011442 20011584 -146638712 - B1_Mm SINE Alu 0 147 2 3 737 337 317 99 84 chrX 20011644 20011970 -146638326 - MLT1H2 LTR MaLR -176 373 23 3 737 1320 86 0 60 chrX 20013031 20013230 -146637066 + B2_Mm2 SINE B2 1 187 -8 3 737 257 238 0 175 chrX 20013390 20013487 -146636809 - ID4_ SINE ID 0 83 4 3 737 395 264 133 9 chrX 20013521 20013689 -146636607 - L1M5 LINE L1 -475 5709 5524 3 737 355 286 248 39 chrX 20013693 20013846 -146636450 - L1MCa LINE L1 -1187 5754 5570 3 737 378 225 0 0 chrX 20013859 20013939 -146636357 - ID4 SINE ID 0 83 4 3 737 324 298 21 11 chrX 20014181 20014276 -146636020 + MER68 LTR ERVL 3 98 -465 3 737 981 250 101 43 chrX 20014386 20014712 -146635584 + Lx8 LINE L1 7128 7472 -1 3 737 492 271 134 50 chrX 20014757 20015074 -146635222 - L1MCa LINE L1 -4791 2337 2006 3 737 1221 54 0 0 chrX 20015074 20015221 -146635075 - B1_Mus2 SINE Alu 0 147 1 3 737 492 271 134 50 chrX 20015221 20015404 -146634892 - L1MCa LINE L1 -5123 2005 1795 3 737 989 219 11 5 chrX 20015410 20015594 -146634702 - B3 SINE B2 -27 189 5 4 737 195 114 0 0 chrX 20015603 20015638 -146634658 + (TGG)n Simple_repeat Simple_repeat 2 36 0 4 737 506 222 17 12 chrX 20015658 20015831 -146634465 + CT-rich Low_complexity Low_complexity 2 175 0 4 737 354 309 41 49 chrX 20015887 20016060 -146634236 - L1MCa LINE L1 -5388 1740 1477 3 737 1203 111 11 16 chrX 20016060 20016244 -146634052 - B2_Mm1t SINE B2 -9 184 2 4 737 354 280 13 59 chrX 20016244 20016329 -146633967 - L1MCa LINE L1 -4947 1476 1391 3 737 8043 86 9 0 chrX 20016422 20017630 -146632666 - MusHAL1 LINE L1 -624 2088 870 4 737 7438 56 4 5 chrX 20017622 20019061 -146631235 - L1Md_F2 LINE L1 -13 6569 5131 4 737 810 261 114 2 chrX 20019075 20019479 -146630817 - L1MD LINE L1 -3305 2841 2393 4 737 180 77 0 0 chrX 20019508 20019534 -146630762 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 4 737 1099 53 6 44 chrX 20019535 20019694 -146630602 - B2_Mm2 SINE B2 -41 154 2 4 737 592 241 35 7 chrX 20019934 20020076 -146630220 - B1_Mur1 SINE Alu -3 146 1 4 737 577 322 45 59 chrX 20020221 20020442 -146629854 + B4A SINE B4 3 220 -72 5 737 219 384 127 56 chrX 20020504 20020788 -146629508 - L2b LINE L2 0 3375 3072 5 737 9457 78 19 22 chrX 20020828 20022499 -146627797 - Lx3_Mus LINE L1 -13 6996 5306 5 737 1390 75 5 5 chrX 20022499 20022687 -146627609 - B2_Mm1t SINE B2 -5 188 1 5 737 7635 66 15 50 chrX 20022687 20023013 -146627283 - Lx3_Mus LINE L1 -581 5305 5015 5 737 1116 62 21 0 chrX 20023013 20023157 -146627139 - B1_Mus2 SINE Alu 0 147 1 5 737 7635 66 15 50 chrX 20023157 20023419 -146626877 - Lx3_Mus LINE L1 -872 5014 4764 5 737 342 98 0 58 chrX 20023447 20023510 -146626786 + B1_Mm SINE Alu 60 144 -3 5 737 648 219 92 13 chrX 20023552 20023705 -146626591 - MTE-int LTR MaLR -273 1307 1143 5 737 425 260 100 11 chrX 20023781 20023972 -146626324 - L1MD LINE L1 -703 5539 5328 5 737 9665 45 2 1 chrX 20023971 20025937 -146624359 - L1Md_F3 LINE L1 0 6584 4617 5 737 417 292 48 139 chrX 20025942 20025998 -146624298 - L1MD LINE L1 -818 5328 5281 5 737 1396 66 28 0 chrX 20025998 20026179 -146624117 - B2_Mm1t SINE B2 -5 188 3 5 737 417 292 48 139 chrX 20026179 20026452 -146623844 - L1MD LINE L1 -866 5280 5029 5 737 420 171 0 0 chrX 20026612 20026694 -146623602 + (TA)n Simple_repeat Simple_repeat 1 82 0 6 737 806 260 70 6 chrX 20026694 20027008 -146623288 - L1MA4 LINE L1 -368 5932 5599 6 737 473 90 0 37 chrX 20027010 20027091 -146623205 + (TA)n Simple_repeat Simple_repeat 1 78 0 6 737 237 65 0 0 chrX 20027090 20027121 -146623175 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 737 1131 104 37 0 chrX 20027121 20027285 -146623011 - B2_Mm2 SINE B2 -25 170 1 6 737 326 137 16 12 chrX 20027287 20027371 -146622925 - L1MA4 LINE L1 -695 5605 5521 6 737 228 149 0 0 chrX 20027413 20027460 -146622836 + (TTGG)n Simple_repeat Simple_repeat 1 47 0 6 737 343 328 54 54 chrX 20027463 20027592 -146622704 - ID_B1 SINE B4 -27 197 69 6 737 274 173 13 39 chrX 20027592 20027670 -146622626 - L1M LINE L1 -871 5426 5351 6 737 768 191 7 47 chrX 20027675 20027823 -146622473 - B1_Mus1 SINE Alu 0 148 7 6 737 310 211 70 134 chrX 20027719 20027861 -146622435 - MT2B LTR ERVL -344 257 125 6 737 1533 262 116 14 chrX 20027952 20028385 -146621911 + RCHARR1 DNA MER1_type 1 477 -497 7 737 557 249 125 16 chrX 20028399 20028591 -146621705 + B3 SINE B2 2 214 -2 7 737 552 217 0 0 chrX 20028644 20028736 -146621560 + B1_Mur1 SINE Alu 52 143 -6 7 737 621 211 18 55 chrX 20028743 20028781 -146621515 + RCHARR1 DNA MER1_type 510 548 -426 7 737 3059 42 39 5 chrX 20028781 20029164 -146621132 + MTA_Mm LTR MaLR 1 396 0 7 737 621 211 18 55 chrX 20029164 20029290 -146621006 + RCHARR1 DNA MER1_type 549 668 -306 7 737 795 188 0 21 chrX 20029291 20029432 -146620864 + B1_Mur3 SINE Alu 1 138 -11 7 737 243 0 0 0 chrX 20029432 20029459 -146620837 + (CAA)n Simple_repeat Simple_repeat 2 28 0 7 737 418 246 79 20 chrX 20029557 20029680 -146620616 + B3A SINE B2 61 186 -30 7 737 238 287 75 42 chrX 20029723 20029843 -146620453 + RCHARR1 DNA MER1_type 659 782 -192 7 737 42 36 0 0 chrX 20029906 20029962 -146620334 + AT_rich Low_complexity Low_complexity 1 56 0 7 737 654 354 77 21 chrX 20030092 20030418 -146619878 + MLT1D LTR MaLR 57 400 -105 7 737 270 217 107 12 chrX 20030416 20030500 -146619796 + MLT1D LTR MaLR 561 652 -2 7 737 412 289 0 17 chrX 20030560 20030676 -146619620 - PB1D10 SINE Alu -2 115 2 7 737 715 245 0 0 chrX 20030882 20031029 -146619267 - B1_Mur1 SINE Alu 0 149 3 8 737 298 229 18 54 chrX 20031074 20031185 -146619111 - L1MB7 LINE L1 -8 6176 6070 8 737 540 241 130 108 chrX 20031187 20031332 -146618964 - L1M4b LINE L1 -5116 2218 2083 8 737 1105 64 43 0 chrX 20031332 20031473 -146618823 - B1_Mus1 SINE Alu 0 148 2 8 737 540 241 130 108 chrX 20031473 20031819 -146618477 - L1M4b LINE L1 -5252 2082 1716 8 737 860 259 99 60 chrX 20031885 20032000 -146618296 - L1M4b LINE L1 -5780 1554 1439 8 737 243 0 0 0 chrX 20032000 20032027 -146618269 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 8 737 860 259 99 60 chrX 20032027 20032326 -146617970 - L1M4b LINE L1 -5896 1438 1124 8 737 270 160 0 0 chrX 20032406 20032456 -146617840 + (TTG)n Simple_repeat Simple_repeat 1 50 0 8 737 767 225 0 0 chrX 20032457 20032595 -146617701 - B1_Mur1 SINE Alu -10 139 2 8 737 180 111 0 0 chrX 20032647 20032674 -146617622 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 737 895 278 0 21 chrX 20032684 20032875 -146617421 - B3 SINE B2 -29 187 1 8 737 5512 117 23 30 chrX 20032942 20033806 -146616490 + Lx2A1 LINE L1 6150 7007 -1 8 737 213 55 33 98 chrX 20033845 20033906 -146616390 + (TTTA)n Simple_repeat Simple_repeat 2 58 0 9 737 1323 69 17 6 chrX 20033906 20034081 -146616215 - B2_Mm2 SINE B2 -18 177 1 9 737 259 273 91 0 chrX 20034134 20034200 -146616096 + ID4_ SINE ID 12 83 0 9 737 393 22 0 0 chrX 20034321 20034367 -146615929 + (TC)n Simple_repeat Simple_repeat 2 47 0 9 737 1141 69 0 0 chrX 20034383 20034527 -146615769 - B1_Mus2 SINE Alu -1 146 3 9 737 767 348 71 61 chrX 20034633 20034721 -146615575 - L1M4b LINE L1 -6744 590 507 8 737 1580 27 16 0 chrX 20034721 20034907 -146615389 - B2_Mm1a SINE B2 -3 190 2 9 737 767 348 71 61 chrX 20034907 20035308 -146614988 - L1M4b LINE L1 -6828 506 96 8 737 412 143 12 0 chrX 20036492 20036576 -146613720 - Lx LINE L1 0 6654 6570 9 737 210 71 0 0 chrX 20037772 20037800 -146612496 + (T)n Simple_repeat Simple_repeat 1 28 0 9 737 1273 20 0 0 chrX 20037800 20037947 -146612349 - B1_Mus2 SINE Alu 0 147 1 9 737 636 44 32 5 chrX 20038288 20038396 -146611900 - B1_Mus1 SINE Alu 0 120 2 9 737 372 202 0 92 chrX 20038317 20038415 -146611881 - MT2B LTR ERVL -365 236 148 1 737 471 141 0 0 chrX 20038472 20038550 -146611746 + (TC)n Simple_repeat Simple_repeat 1 78 0 1 737 212 189 0 0 chrX 20038668 20038705 -146611591 + T-rich Low_complexity Low_complexity 1 37 0 1 737 1269 65 0 0 chrX 20038724 20038892 -146611404 + (TTTC)n Simple_repeat Simple_repeat 3 170 0 1 737 981 84 7 14 chrX 20038892 20039037 -146611259 - B1_Mus1 SINE Alu -4 144 1 1 737 778 297 106 137 chrX 20039912 20040431 -146609865 - MLT1E1A LTR MaLR -11 669 62 1 737 845 221 107 10 chrX 20040604 20040775 -146609521 + B3 SINE B2 1 186 -30 1 737 405 0 0 0 chrX 20040775 20040820 -146609476 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 737 351 0 0 0 chrX 20040820 20040858 -146609438 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 737 845 221 107 10 chrX 20040858 20040882 -146609414 + B3 SINE B2 187 215 -1 1 737 278 274 50 33 chrX 20040897 20041018 -146609278 - L1MD3 LINE L1 -348 7647 7525 1 737 380 221 25 0 chrX 20041213 20041309 -146608987 - MLT1E1A LTR MaLR -13 667 583 1 737 393 110 0 0 chrX 20041317 20041390 -146608906 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 737 641 236 87 13 chrX 20041390 20041540 -146608756 + RSINE1 SINE B4 5 165 0 1 737 27 0 0 0 chrX 20041599 20041626 -146608670 + AT_rich Low_complexity Low_complexity 1 27 0 1 737 389 225 0 0 chrX 20041640 20041711 -146608585 - ID4_ SINE ID -10 73 3 1 737 311 232 40 59 chrX 20042012 20042113 -146608183 - L1MC LINE L1 -3114 3032 2934 1 737 272 238 50 0 chrX 20042148 20042228 -146608068 - L1MDa LINE L1 -3350 3187 3104 1 737 561 268 86 14 chrX 20042236 20042376 -146607920 - B3A SINE B2 -47 151 2 1 737 441 300 145 16 chrX 20042376 20042569 -146607727 - L1MDa LINE L1 -4941 1692 1475 1 737 567 231 113 53 chrX 20042711 20042919 -146607377 - L1MDa LINE L1 -5227 1406 1188 1 737 1068 62 0 52 chrX 20042919 20043073 -146607223 - B1_Mus2 SINE Alu 0 147 2 1 737 567 231 113 53 chrX 20043073 20043244 -146607052 - L1MDa LINE L1 -5446 1187 1004 1 737 382 405 45 54 chrX 20043348 20043570 -146606726 - L1MDa LINE L1 -5754 879 660 1 737 543 191 17 76 chrX 20043643 20043762 -146606534 + ID_B1 SINE B4 107 218 -6 1 737 1346 258 18 22 chrX 20043776 20044232 -146606064 - L1MB7 LINE L1 -20 6164 5711 1 737 336 256 53 19 chrX 20044730 20044836 -146605460 - B1F SINE Alu -10 139 10 1 737 578 204 0 74 chrX 20044935 20045083 -146605213 - BC1_Mm scRNA scRNA -14 138 2 1 737 404 229 48 41 chrX 20045109 20045267 -146605029 - L1MA4A LINE L1 -356 5935 5781 1 737 494 236 70 6 chrX 20045306 20045469 -146604827 - L1MA4A LINE L1 -652 5660 5487 1 737 387 0 0 0 chrX 20045469 20045512 -146604784 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 737 567 311 104 0 chrX 20046072 20046284 -146604012 - MIR SINE MIR -8 254 21 1 737 311 264 110 28 chrX 20046474 20046583 -146603713 + MLT1A1 LTR MaLR 259 376 -32 1 737 333 0 0 0 chrX 20046672 20046709 -146603587 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 737 1278 27 0 0 chrX 20047099 20047246 -146603050 - B1_Mus2 SINE Alu 0 147 1 1 737 481 266 149 19 chrX 20047327 20047488 -146602808 - MLT1C LTR MaLR 0 467 286 1 737 195 186 0 0 chrX 20047633 20047676 -146602620 + CT-rich Low_complexity Low_complexity 3 45 0 1 737 7021 68 13 11 chrX 20047896 20049238 -146601058 - L1_Mus2 LINE L1 -1 6565 5223 1 737 1405 85 0 0 chrX 20049241 20049440 -146600856 + L1_Mus2 LINE L1 5046 5244 -639 1 737 825 226 66 5 chrX 20049483 20049679 -146600617 + B3 SINE B2 3 210 -6 1 737 26 0 0 0 chrX 20050332 20050358 -146599938 + AT_rich Low_complexity Low_complexity 1 26 0 1 737 4064 123 24 2 chrX 20050366 20050984 -146599312 - Lx3A LINE L1 -7 6974 6343 1 737 17481 4 0 0 chrX 20050984 20053733 -146596563 - L1Md_A LINE L1 0 6582 3834 1 92 2891 87 50 17 chrX 20053708 20054187 -146596109 - Lx3B LINE L1 -579 6394 5900 1 738 368 306 90 27 chrX 20054909 20055020 -146595276 + PB1D7 SINE Alu 2 119 -1 1 738 265 316 0 13 chrX 20055030 20055107 -146595189 + ID4 SINE ID 1 76 -7 1 738 411 212 137 32 chrX 20055400 20055779 -146594517 + L1MC4a LINE L1 7296 7749 -133 1 738 503 286 17 26 chrX 20055787 20055902 -146594394 + PB1D7 SINE Alu 7 120 0 1 738 597 257 20 14 chrX 20055932 20056078 -146594218 + B1F2 SINE Alu 2 148 -1 1 738 318 289 41 16 chrX 20056081 20056204 -146594092 + L1MC4a LINE L1 7854 7979 -16 1 738 315 0 0 0 chrX 20056360 20056395 -146593901 + (TAA)n Simple_repeat Simple_repeat 3 37 0 1 738 252 0 0 0 chrX 20056395 20056423 -146593873 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1 738 1128 82 0 0 chrX 20057291 20057437 -146592859 + B1_Mus2 SINE Alu 2 147 0 1 738 260 237 9 93 chrX 20057648 20057755 -146592541 - RMER1C Other Other -4 1338 1241 1 738 512 30 0 15 chrX 20057772 20057839 -146592457 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 1 738 476 296 45 0 chrX 20057881 20058013 -146592283 - B1F SINE Alu -7 142 5 1 738 2219 256 73 26 chrX 20058292 20058866 -146591430 - Lx5 LINE L1 0 7050 6450 1 738 239 220 0 0 chrX 20059106 20059113 -146591183 + (TATATG)n Simple_repeat Simple_repeat 2 8 0 1 738 237 108 0 0 chrX 20059113 20059150 -146591146 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 738 239 220 0 0 chrX 20059150 20059192 -146591104 + (TATATG)n Simple_repeat Simple_repeat 2 43 0 1 738 475 129 78 14 chrX 20059196 20059296 -146591000 + L1_Mur2 LINE L1 4402 4510 -1373 1 738 1679 263 32 13 chrX 20059338 20059801 -146590495 + Lx6 LINE L1 6963 7434 -26 1 738 453 246 117 92 chrX 20059836 20059904 -146590392 - L1MD LINE L1 -2515 3631 3565 1 738 499 239 28 122 chrX 20059904 20060118 -146590178 - B3A SINE B2 -4 194 1 1 738 453 246 117 92 chrX 20060118 20060331 -146589965 - L1MD LINE L1 -2582 3564 3343 1 738 655 334 155 52 chrX 20060391 20061221 -146589075 + L1MDa LINE L1 41 1087 -5546 1 738 234 220 169 0 chrX 20061237 20061296 -146589000 + ID2 SINE ID 4 72 -11 1 738 355 350 113 45 chrX 20061897 20062183 -146588113 - MLT1G3 LTR MaLR -312 279 3 1 738 484 258 128 8 chrX 20062303 20062436 -146587860 + B1F1 SINE Alu 1 149 0 1 738 773 172 256 0 chrX 20063011 20063191 -146587105 + URR1A DNA MER1_type 1 226 0 1 738 2597 49 0 21 chrX 20063248 20063584 -146586712 - L1_Mus1 LINE L1 0 6567 6239 1 738 486 0 0 0 chrX 20063623 20063677 -146586619 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 738 1190 90 39 22 chrX 20063771 20063953 -146586343 + B2_Mm2 SINE B2 2 186 -9 1 738 573 259 0 3 chrX 20063998 20064119 -146586177 + B1_Mur2 SINE Alu 3 120 0 1 738 2231 255 87 34 chrX 20064316 20065392 -146584904 - L1ME3A LINE L1 -7 6166 5031 1 738 23 0 0 0 chrX 20066298 20066321 -146583975 + AT_rich Low_complexity Low_complexity 1 23 0 1 738 22 35 0 0 chrX 20067633 20067662 -146582634 + AT_rich Low_complexity Low_complexity 1 29 0 1 738 1093 52 0 0 chrX 20067737 20067871 -146582425 + B1_Mus2 SINE Alu 2 135 -12 1 738 207 0 0 0 chrX 20067873 20067896 -146582400 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1 738 651 267 19 35 chrX 20068160 20068420 -146581876 - L1MC3 LINE L1 -13 7772 7517 1 738 2721 179 109 11 chrX 20068439 20068980 -146581316 - Lx9 LINE L1 -329 7315 6722 1 738 1413 192 56 6 chrX 20068982 20069301 -146580995 + Lx9 LINE L1 7303 7637 -7 1 738 1190 124 41 10 chrX 20069394 20069589 -146580707 - MTC LTR MaLR 0 421 221 1 738 307 256 12 24 chrX 20069557 20069641 -146580655 - MTC LTR MaLR -322 85 3 1 738 416 266 46 0 chrX 20069641 20069775 -146580521 - B3 SINE B2 -44 172 1 1 738 24 32 0 0 chrX 20069857 20069888 -146580408 + AT_rich Low_complexity Low_complexity 1 31 0 1 738 514 250 73 42 chrX 20070305 20070497 -146579799 - Lx7 LINE L1 -1891 5805 5608 1 738 184 180 32 32 chrX 20070541 20070604 -146579692 + (TATG)n Simple_repeat Simple_repeat 1 63 0 1 738 21 36 0 0 chrX 20071246 20071274 -146579022 + AT_rich Low_complexity Low_complexity 1 28 0 1 738 348 278 93 0 chrX 20071538 20071635 -146578661 - RSINE1 SINE B4 -35 130 25 1 738 777 278 148 20 chrX 20072377 20072627 -146577669 + B4 SINE B4 11 292 0 1 738 289 317 19 56 chrX 20072779 20072886 -146577410 - L2b LINE L2 0 3375 3273 1 738 1419 128 99 93 chrX 20073433 20073735 -146576561 - ORR1C2 LTR MaLR -3 381 78 1 738 1144 200 85 34 chrX 20073765 20074060 -146576236 - Lx5 LINE L1 0 7050 6741 1 738 507 283 184 30 chrX 20074255 20074521 -146575775 + MER46C DNA MER2_type 24 330 -8 1 738 249 136 111 63 chrX 20074854 20074917 -146575379 + PB1D10 SINE Alu 47 112 -5 1 738 22 0 0 0 chrX 20075025 20075047 -146575249 + AT_rich Low_complexity Low_complexity 1 22 0 1 738 511 281 107 24 chrX 20076964 20077132 -146573164 + B3A SINE B2 1 182 -16 1 738 41 0 0 0 chrX 20077140 20077181 -146573115 + AT_rich Low_complexity Low_complexity 1 41 0 1 738 380 223 165 39 chrX 20077327 20077549 -146572747 - L1ME3 LINE L1 -170 5992 5729 1 738 428 241 53 18 chrX 20077592 20077706 -146572590 - PB1D9 SINE Alu -2 118 1 1 738 382 275 79 7 chrX 20077862 20078001 -146572295 + B1F SINE Alu 1 149 0 1 738 522 305 43 78 chrX 20078012 20078243 -146572053 + ID_B1 SINE B4 2 224 0 1 738 450 336 91 13 chrX 20078247 20078401 -146571895 + ID_B1 SINE B4 7 172 -52 1 738 468 213 42 21 chrX 20078329 20078425 -146571871 + PB1D10 SINE Alu 20 117 0 1 738 1061 243 9 36 chrX 20078594 20078816 -146571480 + B3 SINE B2 1 216 0 1 738 930 231 56 71 chrX 20079825 20080021 -146570275 - B3A SINE B2 0 195 3 1 738 419 300 8 24 chrX 20080056 20080179 -146570117 + PB1 SINE Alu 3 123 -4 1 738 753 183 200 0 chrX 20080445 20080625 -146569671 + B3 SINE B2 1 216 0 1 738 865 237 41 18 chrX 20081046 20081233 -146569063 + MTD LTR MaLR 14 207 -212 1 738 2996 76 7 38 chrX 20081233 20081683 -146568613 + L1_Mus3 LINE L1 6201 6636 -2 1 738 865 237 41 18 chrX 20081683 20081714 -146568582 + MTD LTR MaLR 208 236 -183 1 738 414 0 0 0 chrX 20081714 20081760 -146568536 + (GGAA)n Simple_repeat Simple_repeat 2 47 0 2 738 855 215 111 21 chrX 20081769 20081959 -146568337 + MTD LTR MaLR 205 411 -8 1 738 27 49 0 0 chrX 20082175 20082216 -146568080 + AT_rich Low_complexity Low_complexity 1 41 0 2 738 256 292 111 0 chrX 20082576 20082648 -146567648 - ID4 SINE ID -2 81 2 2 738 704 285 148 24 chrX 20082670 20083008 -146567288 - L2a LINE L2 -4 3422 3043 2 738 415 75 73 15 chrX 20083008 20083076 -146567220 - Lx3_Mus LINE L1 -786 6223 6152 2 738 249 191 0 21 chrX 20083076 20083124 -146567172 + B1_Mur1 SINE Alu 101 147 -2 2 738 358 224 87 0 chrX 20083133 20083226 -146567070 + PB1D10 SINE Alu 12 113 -36 2 738 208 220 9 99 chrX 20083281 20083392 -146566904 + A-rich Low_complexity Low_complexity 4 104 0 2 738 690 307 103 27 chrX 20084059 20084320 -146565976 - MER77 LTR ERVL -273 334 54 2 738 379 182 0 13 chrX 20084345 20084423 -146565873 + L1M4 LINE L1 5647 5723 -455 2 738 706 179 13 103 chrX 20085080 20085236 -146565060 + B1_Mur2 SINE Alu 3 144 -5 2 738 816 250 27 0 chrX 20085508 20085696 -146564600 + B3A SINE B2 1 193 -5 2 738 36 23 0 0 chrX 20086336 20086379 -146563917 + AT_rich Low_complexity Low_complexity 1 43 0 2 738 4213 28 4 0 chrX 20086379 20086874 -146563422 - L1Md_F2 LINE L1 -14 6568 6072 2 738 236 358 0 0 chrX 20087376 20087443 -146562853 - ID4 SINE ID 0 83 17 2 738 21 0 0 0 chrX 20087465 20087486 -146562810 + AT_rich Low_complexity Low_complexity 1 21 0 2 738 709 282 0 61 chrX 20088936 20089166 -146561130 - MER20 DNA MER1_type -2 217 2 2 738 195 69 0 0 chrX 20089498 20089527 -146560769 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 738 194 301 41 0 chrX 20089527 20089600 -146560696 - MIRc SINE MIR -111 157 82 2 738 330 107 114 45 chrX 20089681 20089769 -146560527 - L1Md_F3 LINE L1 -1 6583 6490 2 738 1081 45 30 0 chrX 20090399 20090533 -146559763 - B1_Mm SINE Alu -9 138 1 2 738 1265 169 27 9 chrX 20090641 20090862 -146559434 + URR1B DNA MER1_type 1 225 0 2 738 6008 148 122 52 chrX 20090935 20092654 -146557642 - ORR1B1-int LTR MaLR 0 1963 15 2 738 368 302 32 56 chrX 20092812 20092938 -146557358 + RSINE1 SINE B4 1 123 -42 2 738 1181 41 0 13 chrX 20092938 20093087 -146557209 + B1_Mus2 SINE Alu 1 147 0 2 738 635 247 65 33 chrX 20093494 20093678 -146556618 + B4A SINE B4 57 246 -46 2 738 330 269 0 0 chrX 20093716 20093783 -146556513 + B4A SINE B4 216 282 -10 2 738 400 242 83 10 chrX 20097216 20097312 -146552984 + PB1D10 SINE Alu 10 112 -5 2 738 1570 104 153 78 chrX 20097743 20098077 -146552219 + Lx LINE L1 6284 6642 -12 2 738 317 237 53 0 chrX 20098188 20098264 -146552032 - ID4_ SINE ID -3 80 1 2 738 1460 58 16 5 chrX 20098508 20098697 -146551599 - B2_Mm2 SINE B2 -3 192 2 2 738 243 333 91 35 chrX 20099762 20099905 -146550391 - MIR SINE MIR -83 179 29 2 738 1095 79 0 0 chrX 20100087 20100226 -146550070 + B1_Mus2 SINE Alu 1 139 -8 2 738 867 203 56 17 chrX 20100254 20100434 -146549862 + B3 SINE B2 27 213 -3 2 738 537 340 26 69 chrX 20100577 20100712 -146549584 + MLT1D LTR MaLR 10 145 -360 2 738 2836 63 199 14 chrX 20100712 20101144 -146549152 + RLTR1B LTR ERV1 1 512 0 2 738 537 340 26 69 chrX 20101144 20101239 -146549057 + MLT1D LTR MaLR 146 230 -275 2 738 261 212 392 14 chrX 20101253 20101401 -146548895 + MLT1D LTR MaLR 301 504 -1 2 738 296 273 13 13 chrX 20101523 20101601 -146548695 - ID4 SINE ID -4 79 2 2 738 3807 48 0 0 chrX 20102017 20102478 -146547818 + L1_Mus2 LINE L1 6105 6565 -1 2 738 1218 61 0 0 chrX 20102513 20102660 -146547636 + B1_Mus2 SINE Alu 1 147 0 2 738 746 139 92 15 chrX 20102715 20102846 -146547450 + B1_Mur4 SINE Alu 3 143 -7 2 738 218 344 97 0 chrX 20102892 20102985 -146547311 + B1F1 SINE Alu 5 106 -43 2 738 450 290 89 30 chrX 20103140 20103275 -146547021 + RSINE1 SINE B4 1 143 -22 2 738 305 100 20 0 chrX 20103284 20103334 -146546962 + (CCCCCT)n Simple_repeat Simple_repeat 6 56 0 2 738 392 259 217 50 chrX 20103357 20103597 -146546699 + L1MD LINE L1 2447 2726 -3420 2 738 319 268 0 0 chrX 20103600 20103656 -146546640 + ID4 SINE ID 17 72 -11 2 738 769 221 0 13 chrX 20103780 20103931 -146546365 - B1_Mur1 SINE Alu 0 149 1 2 738 536 236 71 0 chrX 20103943 20104070 -146546226 - B1F SINE Alu -9 140 5 2 738 451 280 34 0 chrX 20104115 20104233 -146546063 + MLT1D LTR MaLR 338 459 -46 2 738 347 213 65 78 chrX 20104245 20104398 -146545898 + L1MD LINE L1 2763 2913 -3233 2 738 256 197 27 108 chrX 20104401 20104475 -146545821 + tRNA-Ala-GCY_ tRNA tRNA 1 68 -7 2 738 525 132 25 0 chrX 20104487 20104608 -146545688 + (TAGA)n Simple_repeat Simple_repeat 4 127 0 2 738 212 351 13 13 chrX 20104653 20104731 -146545565 + ID4_ SINE ID 6 83 0 2 738 2592 174 9 0 chrX 20104833 20105257 -146545039 + Lx5 LINE L1 6223 6650 -400 2 738 479 92 0 0 chrX 20107457 20107522 -146542774 + Lx5 LINE L1 6636 6700 -350 2 738 307 329 0 13 chrX 20107554 20107631 -146542665 + B4A SINE B4 216 291 -1 2 738 438 221 86 26 chrX 20107843 20107959 -146542337 - ID_B1 SINE B4 0 224 102 2 738 231 114 0 0 chrX 20108019 20108054 -146542242 + (A)n Simple_repeat Simple_repeat 1 35 0 2 738 1226 77 27 16 chrX 20108080 20108265 -146542031 + B2_Mm2 SINE B2 7 193 -2 2 738 506 279 94 62 chrX 20108418 20108770 -146541526 + L1M4 LINE L1 3498 3860 -2286 2 738 293 298 165 0 chrX 20108865 20108986 -146541310 + B1_Mur3 SINE Alu 5 145 -4 2 738 255 294 0 0 chrX 20108996 20109064 -146541232 + ID4 SINE ID 5 72 -11 2 738 492 177 123 9 chrX 20109562 20109676 -146540620 - B1_Mur1 SINE Alu 0 149 23 2 738 624 261 59 7 chrX 20110093 20110228 -146540068 + RSINE1 SINE B4 2 143 -22 2 738 564 15 0 0 chrX 20110415 20110480 -146539816 + (GAAA)n Simple_repeat Simple_repeat 2 66 0 2 738 1179 112 0 0 chrX 20110496 20110675 -146539621 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 2 738 5083 102 35 12 chrX 20110769 20111532 -146538764 + Lx LINE L1 5868 6648 -6 2 738 2302 38 0 0 chrX 20111775 20112040 -146538256 + L1Md_T LINE L1 6131 6395 -187 2 738 11291 10 0 14 chrX 20112037 20112166 -146538130 + L1Md_A LINE L1 4316 4443 -1440 2 738 1544 36 0 20 chrX 20112166 20112363 -146537933 + B2_Mm1a SINE B2 1 193 0 2 738 11291 10 0 14 chrX 20112363 20113522 -146536774 + L1Md_A LINE L1 4444 5586 -297 2 738 9028 12 0 0 chrX 20113522 20114518 -146535778 + L1Md_A LINE L1 5587 6582 0 2 738 1612 59 0 0 chrX 20114526 20114728 -146535568 + L1Md_T LINE L1 6381 6582 0 2 738 634 247 82 0 chrX 20114744 20114860 -146535436 + RSINE1 SINE B4 1 120 -45 2 738 342 0 0 0 chrX 20114860 20114898 -146535398 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 738 634 247 82 0 chrX 20114898 20114927 -146535369 + RSINE1 SINE B4 121 156 -9 2 738 499 237 114 0 chrX 20115189 20115320 -146534976 - B1F2 SINE Alu -3 146 1 2 738 1003 136 197 6 chrX 20115401 20115579 -146534717 + B3 SINE B2 2 213 -3 2 738 277 246 43 0 chrX 20116092 20116161 -146534135 + ID4 SINE ID 3 74 -9 2 738 749 219 7 7 chrX 20116416 20116563 -146533733 + B1F SINE Alu 3 149 0 2 738 292 384 0 43 chrX 20116564 20116681 -146533615 + ID_B1 SINE B4 82 193 -31 2 738 490 267 63 69 chrX 20116999 20117188 -146533108 + B3A SINE B2 11 198 0 2 738 1128 86 56 17 chrX 20117483 20117661 -146532635 + B2_Mm1t SINE B2 2 186 -7 2 738 231 229 0 40 chrX 20117941 20117991 -146532305 - B1F1 SINE Alu -101 48 1 2 738 255 303 0 0 chrX 20118186 20118252 -146532044 + ID4_ SINE ID 4 69 -14 2 738 4417 96 15 28 chrX 20118334 20118986 -146531310 + Lx3A LINE L1 6334 6977 -4 2 738 209 208 0 0 chrX 20118988 20119036 -146531260 + A-rich Low_complexity Low_complexity 1 48 0 2 738 260 254 60 0 chrX 20119052 20119119 -146531177 + MER90a LTR ERV1 238 308 -306 2 738 856 244 20 20 chrX 20119178 20119379 -146530917 + B3 SINE B2 7 207 -9 2 738 1002 202 5 55 chrX 20119399 20119619 -146530677 + B3 SINE B2 1 209 -7 2 738 268 272 260 0 chrX 20119627 20119791 -146530505 + MER90a LTR ERV1 362 567 -47 2 738 231 133 0 0 chrX 20119920 20119965 -146530331 + (GA)n Simple_repeat Simple_repeat 1 45 0 2 738 351 0 0 0 chrX 20119965 20120004 -146530292 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 2 738 275 274 0 0 chrX 20120009 20120071 -146530225 + L1MC4 LINE L1 7948 8009 -33 2 738 572 255 135 140 chrX 20120072 20120451 -146529845 + MTE2a LTR MaLR 3 379 0 2 738 585 232 79 7 chrX 20120483 20120622 -146529674 + B1_Mur2 SINE Alu 1 149 0 2 738 1000 118 7 0 chrX 20120635 20120779 -146529517 + B1_Mus1 SINE Alu 4 148 0 2 738 632 313 77 5 chrX 20121314 20121529 -146528767 - B4 SINE B4 -4 220 1 2 738 237 167 0 0 chrX 20121851 20121905 -146528391 + GA-rich Low_complexity Low_complexity 1 54 0 2 738 382 245 0 78 chrX 20121906 20122008 -146528288 - RSINE1 SINE B4 -24 141 48 2 738 506 290 16 0 chrX 20122309 20122433 -146527863 + B1F1 SINE Alu 1 126 -23 2 738 376 278 57 0 chrX 20122978 20123095 -146527201 - RSINE1 SINE B4 -11 281 57 2 738 368 267 12 0 chrX 20123127 20123213 -146527083 - B4A SINE B4 -205 87 1 2 738 425 320 24 0 chrX 20123228 20123353 -146526943 - B1_Mur1 SINE Alu -7 142 15 2 738 294 29 0 0 chrX 20123379 20123414 -146526882 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 738 1074 80 0 0 chrX 20123414 20123551 -146526745 - B1_Mus1 SINE Alu -10 138 2 2 738 992 192 0 70 chrX 20123582 20123737 -146526559 + B3 SINE B2 2 154 -62 2 738 3781 132 92 38 chrX 20123737 20124454 -146525842 + RMER6A LTR ERVK 1 756 0 2 738 992 192 0 70 chrX 20124454 20124527 -146525769 + B3 SINE B2 155 214 -2 2 738 282 275 25 12 chrX 20124558 20124639 -146525657 + ID_B1 SINE B4 142 223 -1 2 738 224 307 173 0 chrX 20124671 20124746 -146525550 + B1F SINE Alu 10 97 -52 2 738 378 294 43 14 chrX 20127134 20127272 -146523024 - Tigger1 DNA MER2_type -2 2416 2275 3 738 288 298 36 0 chrX 20127327 20127411 -146522885 - Tigger1 DNA MER2_type -2296 122 36 3 738 275 277 48 12 chrX 20128519 20128603 -146521693 - RSINE1 SINE B4 -2 163 77 3 738 302 263 105 0 chrX 20128597 20128673 -146521623 - RSINE1 SINE B4 -32 133 50 3 738 248 256 22 79 chrX 20128671 20128760 -146521536 - PB1D10 SINE Alu -1 116 33 3 738 28 0 0 0 chrX 20129304 20129332 -146520964 + AT_rich Low_complexity Low_complexity 1 28 0 3 738 216 67 0 0 chrX 20129683 20129713 -146520583 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 738 204 219 0 0 chrX 20129887 20129928 -146520368 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 738 490 208 0 30 chrX 20129946 20130045 -146520251 - B1_Mur1 SINE Alu -5 144 49 3 738 755 303 89 42 chrX 20130047 20130450 -146519846 - L1MC4 LINE L1 -218 7824 7403 3 738 281 299 44 11 chrX 20130518 20130641 -146519655 - B1F SINE Alu 0 149 14 3 738 595 104 138 151 chrX 20131023 20131141 -146519155 - B2_Mm2 SINE B2 -37 158 40 3 738 1165 81 0 0 chrX 20131141 20131289 -146519007 - B1_Mus1 SINE Alu 0 148 1 3 738 595 104 138 151 chrX 20131289 20131329 -146518967 - B2_Mm2 SINE B2 -156 39 2 3 738 346 325 103 0 chrX 20131319 20131334 -146518962 + ID_B1 SINE B4 65 131 -93 3 738 393 286 0 0 chrX 20131334 20131425 -146518871 + PB1D10 SINE Alu 1 91 -26 3 738 346 325 103 0 chrX 20131425 20131436 -146518860 + ID_B1 SINE B4 132 193 -31 3 738 624 284 95 22 chrX 20131730 20132004 -146518292 - L1MEf LINE L1 -3443 3101 2808 3 738 686 280 94 28 chrX 20132018 20132484 -146517812 - L1MEf LINE L1 -4840 1800 1276 3 738 22 0 0 0 chrX 20132501 20132523 -146517773 + AT_rich Low_complexity Low_complexity 1 22 0 3 738 1250 216 78 0 chrX 20132799 20133082 -146517214 + Lx3C LINE L1 6670 6974 -2 3 738 40 67 0 28 chrX 20133082 20133190 -146517106 + AT_rich Low_complexity Low_complexity 1 105 0 3 738 279 288 0 0 chrX 20133419 20133485 -146516811 - L1MEf LINE L1 -5556 1084 1019 3 738 366 290 93 7 chrX 20133562 20133701 -146516595 - L1MEf LINE L1 -5648 899 749 3 738 1472 54 16 11 chrX 20133701 20133889 -146516407 - B2_Mm2 SINE B2 -6 189 1 3 738 985 96 59 0 chrX 20133941 20134076 -146516220 - B1_Mus1 SINE Alu -4 144 2 3 738 287 302 31 20 chrX 20136074 20136172 -146514124 + B1F SINE Alu 46 144 -5 3 738 249 325 26 0 chrX 20136181 20136298 -146513998 + BC1_Mm scRNA scRNA 11 130 -22 3 738 261 257 76 11 chrX 20136847 20136948 -146513348 + B1F1 SINE Alu 1 108 -41 3 738 1172 66 84 6 chrX 20137597 20137764 -146512532 + B2_Mm2 SINE B2 2 181 -14 3 738 1231 55 0 0 chrX 20137788 20137934 -146512362 + B1_Mus2 SINE Alu 1 146 -1 3 738 185 0 40 0 chrX 20137934 20137959 -146512337 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 738 1153 118 50 6 chrX 20138148 20138327 -146511969 + B2_Mm2 SINE B2 1 187 -8 3 738 608 164 209 0 chrX 20138395 20138505 -146511791 - B1F SINE Alu -16 133 1 3 738 902 78 8 0 chrX 20139242 20139370 -146510926 + (TC)n Simple_repeat Simple_repeat 2 130 0 3 738 689 240 14 37 chrX 20139501 20139669 -146510627 - ID_B1 SINE B4 -46 246 85 3 738 227 333 16 55 chrX 20139557 20139684 -146510612 + YREP_Mm Unknown Unknown 206 327 -1485 3 738 744 284 107 15 chrX 20139995 20140409 -146509887 - L1MEf LINE L1 -5296 1251 809 3 738 1065 255 52 110 chrX 20141018 20141445 -146508851 - MTD LTR MaLR 0 419 18 3 738 587 253 36 98 chrX 20141463 20141507 -146508789 + B3A SINE B2 2 42 -156 3 738 1256 96 34 6 chrX 20141507 20141685 -146508611 + B2_Mm2 SINE B2 4 186 -9 3 738 750 199 41 25 chrX 20141685 20141861 -146508435 + B3 SINE B2 37 210 -6 3 738 256 228 0 123 chrX 20141895 20141960 -146508336 - B4 SINE B4 -27 265 209 3 738 1478 75 0 11 chrX 20141963 20142153 -146508143 - B2_Mm1a SINE B2 -4 189 2 3 738 933 194 34 0 chrX 20142173 20142348 -146507948 + B3 SINE B2 36 216 0 3 738 774 244 147 0 chrX 20142359 20142556 -146507740 - B4 SINE B4 -66 226 1 3 738 350 346 32 38 chrX 20142844 20143030 -146507266 + LTR40c LTR ERVL 188 372 -93 3 738 1017 194 53 5 chrX 20143051 20143238 -146507058 - B3A SINE B2 -2 196 1 3 738 1112 104 65 11 chrX 20143841 20143879 -146506417 - B2_Mm2 SINE B2 0 195 157 3 738 366 23 0 0 chrX 20143879 20143922 -146506374 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 738 1112 104 65 11 chrX 20143922 20144067 -146506229 - B2_Mm2 SINE B2 -39 156 3 3 738 553 282 28 0 chrX 20144266 20144408 -146505888 + B1F1 SINE Alu 3 148 -1 3 738 337 246 29 0 chrX 20144766 20144835 -146505461 + Lx8 LINE L1 7151 7221 -252 3 738 232 351 11 0 chrX 20144841 20144935 -146505361 + RMER15 LTR ERVL 376 470 -105 3 738 687 159 44 29 chrX 20145323 20145459 -146504837 - B1_Mur3 SINE Alu -6 143 6 3 738 4551 248 74 6 chrX 20145487 20146566 -146503730 + Lx8 LINE L1 6319 7471 -2 3 738 592 229 15 44 chrX 20146577 20146714 -146503582 - B3 SINE B2 -2 214 82 3 738 1054 145 169 10 chrX 20147118 20147313 -146502983 - URR1A DNA MER1_type 0 226 1 3 738 216 0 0 0 chrX 20147356 20147380 -146502916 + (TCC)n Simple_repeat Simple_repeat 3 26 0 3 738 333 169 39 13 chrX 20147403 20147481 -146502815 + B3 SINE B2 4 83 -133 3 738 401 234 44 26 chrX 20148034 20148148 -146502148 + RSINE1 SINE B4 12 127 -38 3 738 471 208 17 58 chrX 20148186 20148329 -146501967 + RMER20B LTR ERVK 25 161 -355 3 738 228 306 41 14 chrX 20148565 20148638 -146501658 + RMER20A LTR ERVK 442 516 0 3 738 440 287 40 40 chrX 20149342 20149491 -146500805 - B3 SINE B2 0 216 68 3 738 2224 229 9 74 chrX 20150560 20150831 -146499465 + Lx7 LINE L1 6946 7207 -489 3 738 1505 44 0 6 chrX 20150831 20151012 -146499284 - B2_Mm2 SINE B2 -14 181 2 3 738 2224 229 9 74 chrX 20151012 20151305 -146498991 + Lx7 LINE L1 7208 7473 -223 3 738 393 22 0 0 chrX 20151359 20151405 -146498891 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 3 738 923 128 42 14 chrX 20151430 20151573 -146498723 - B1_Mus1 SINE Alu -1 147 1 3 738 781 217 161 0 chrX 20151641 20151821 -146498475 - B3 SINE B2 -7 209 1 3 738 265 192 110 0 chrX 20151868 20151941 -146498355 - ID4 SINE ID -1 82 2 3 738 3838 129 78 8 chrX 20151955 20152658 -146497638 - RMER6A LTR ERVK -4 752 1 3 738 290 239 184 0 chrX 20152660 20152769 -146497527 - MIR SINE MIR -11 251 123 3 738 221 246 31 0 chrX 20152951 20153016 -146497280 - MIRc SINE MIR -119 149 83 3 738 253 321 33 67 chrX 20153159 20153279 -146497017 + PB1 SINE Alu 2 117 -10 3 738 680 270 31 19 chrX 20153432 20153594 -146496702 + RSINE1 SINE B4 2 165 0 3 738 198 103 0 0 chrX 20153594 20153623 -146496673 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 3 738 353 181 61 41 chrX 20153660 20153758 -146496538 - RMER10A LTR ERVL -28 414 315 3 738 278 109 36 0 chrX 20153888 20153943 -146496353 + (CAGAGA)n Simple_repeat Simple_repeat 3 59 0 3 738 311 198 66 55 chrX 20154297 20154388 -146495908 - RMER10A LTR ERVL -332 110 19 3 738 1259 206 25 82 chrX 20154483 20154848 -146495448 - RLTR40 LTR ERVK -13 804 461 3 738 473 0 18 0 chrX 20154865 20154922 -146495374 + (TA)n Simple_repeat Simple_repeat 1 58 0 3 738 663 104 28 0 chrX 20154922 20155028 -146495268 + B2_Mm2 SINE B2 82 190 -5 3 738 399 135 167 11 chrX 20155024 20155114 -146495182 - RLTR40 LTR ERVK -570 247 144 3 738 443 244 0 0 chrX 20155135 20155221 -146495075 - B1_Mur4 SINE Alu -3 147 62 3 738 281 272 31 81 chrX 20155245 20155405 -146494891 - RLTR40 LTR ERVK -665 152 1 3 738 1315 91 11 0 chrX 20155540 20155716 -146494580 + B2_Mm1t SINE B2 2 179 -14 3 738 390 232 42 58 chrX 20155755 20155906 -146494390 - RLTR41 LTR ERV1 -56 476 264 3 738 310 75 444 10 chrX 20156122 20156214 -146494082 + B2_Mm2 SINE B2 53 184 -11 3 738 1170 81 0 0 chrX 20156235 20156383 -146493913 + B1_Mus1 SINE Alu 1 148 0 3 738 354 45 0 0 chrX 20156499 20156543 -146493753 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 3 738 621 264 0 0 chrX 20156642 20156782 -146493514 - B1_Mur1 SINE Alu -6 143 4 3 738 3085 133 30 0 chrX 20157178 20157674 -146492622 - L1_Mur3 LINE L1 -1856 4024 3514 3 738 2963 12 0 0 chrX 20157674 20158003 -146492293 + L1Md_A LINE L1 6199 6527 -55 3 738 710 92 44 118 chrX 20158017 20158152 -146492144 - L1_Mur3 LINE L1 -2353 3527 3403 3 738 6829 136 38 63 chrX 20158497 20158964 -146491332 - L1_Mur3 LINE L1 -2463 3417 2994 3 738 956 101 64 7 chrX 20158964 20159104 -146491192 - B1_Mus1 SINE Alu 0 148 1 3 738 6829 136 38 63 chrX 20159104 20159937 -146490359 - L1_Mur3 LINE L1 -2887 2993 2158 3 738 1393 90 16 0 chrX 20159937 20160125 -146490171 - B2_Mm2 SINE B2 -3 192 2 3 738 6829 136 38 63 chrX 20160125 20160219 -146490077 - L1_Mur3 LINE L1 -3723 2157 2057 3 738 456 19 0 0 chrX 20160222 20160275 -146490021 + (TA)n Simple_repeat Simple_repeat 2 54 0 3 738 2545 222 75 40 chrX 20160278 20160921 -146489375 - Lx9 LINE L1 -179 7465 6801 3 738 473 271 126 50 chrX 20160922 20161120 -146489176 - B3 SINE B2 -1 215 3 3 738 205 226 0 19 chrX 20161190 20161244 -146489052 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 738 236 65 0 0 chrX 20161696 20161726 -146488570 - ORR1C1 LTR MaLR -8 370 341 3 738 3699 216 58 112 chrX 20161726 20162982 -146487314 - ORR1C1-int LTR MaLR 0 1370 183 3 738 465 162 123 179 chrX 20163006 20163201 -146487095 - Lx5 LINE L1 -3 7047 6864 3 738 250 130 22 0 chrX 20163201 20163247 -146487049 - ORR1C1 LTR MaLR -335 49 3 3 738 730 231 121 0 chrX 20163279 20163452 -146486844 - ORR1C1-int LTR MaLR -1176 194 1 3 738 1998 162 15 66 chrX 20163452 20163848 -146486448 - ORR1C1 LTR MaLR 0 378 3 3 738 486 184 106 10 chrX 20164453 20164557 -146485739 + PB1D9 SINE Alu 5 118 -2 3 738 772 98 25 0 chrX 20164669 20164791 -146485505 - URR1B DNA MER1_type 0 225 101 3 738 1016 59 0 0 chrX 20164797 20164932 -146485364 + B1_Mus1 SINE Alu 14 148 0 3 738 249 33 0 0 chrX 20164932 20164962 -146485334 + (A)n Simple_repeat Simple_repeat 1 30 0 3 738 1361 96 16 0 chrX 20164973 20165160 -146485136 + B2_Mm2 SINE B2 2 191 -4 3 738 502 183 9 19 chrX 20165174 20165280 -146485016 - URR1B DNA MER1_type -120 105 1 3 738 5458 108 39 41 chrX 20165384 20165503 -146484793 - Lx LINE L1 0 6654 6519 3 738 180 0 0 0 chrX 20165503 20165523 -146484773 + (CCCA)n Simple_repeat Simple_repeat 1 20 0 3 738 5458 108 39 41 chrX 20165523 20165675 -146484621 - Lx LINE L1 -136 6518 6376 3 738 1389 63 0 0 chrX 20165675 20165994 -146484302 + (TTC)n Simple_repeat Simple_repeat 1 319 0 3 738 1155 71 0 0 chrX 20165996 20166137 -146484159 - B1_Mus2 SINE Alu -6 141 1 3 738 5458 108 39 41 chrX 20166137 20166713 -146483583 - Lx LINE L1 -279 6375 5805 3 738 7246 64 14 4 chrX 20167146 20168083 -146482213 - Lx LINE L1 -90 5796 4851 3 738 10533 179 8 71 chrX 20168059 20169417 -146480879 - L1_Mur1 LINE L1 -2423 3454 2102 3 738 1287 80 23 6 chrX 20169417 20169594 -146480702 + B2_Mm2 SINE B2 2 181 -14 4 738 10533 179 8 71 chrX 20169594 20169640 -146480656 - L1_Mur1 LINE L1 -3776 2101 2096 3 738 391 74 14 18 chrX 20169640 20169706 -146480590 + B2_Mm2 SINE B2 46 116 -82 4 738 297 0 0 0 chrX 20169713 20169746 -146480550 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 738 10533 168 68 55 chrX 20169746 20171395 -146478901 - L1_Mur1 LINE L1 -3783 2094 115 3 738 40811 23 0 7 chrX 20171409 20177412 -146472884 - L1Md_T LINE L1 0 6582 627 4 738 901 220 7 127 chrX 20177459 20177766 -146472530 - L1_Mur1 LINE L1 -6668 316 47 3 738 210 37 0 0 chrX 20177786 20177813 -146472483 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 4 738 908 110 0 110 chrX 20177813 20177986 -146472310 - B2_Mm2 SINE B2 -40 155 2 4 738 773 187 114 0 chrX 20178165 20178331 -146471965 + B3 SINE B2 32 216 0 4 738 284 250 73 0 chrX 20178344 20178412 -146471884 - RSINE1 SINE B4 -10 155 83 4 738 283 143 0 0 chrX 20178410 20178452 -146471844 - B1_Mus2 SINE Alu -79 68 27 4 738 329 141 321 9 chrX 20178450 20178562 -146471734 - B2_Mm2 SINE B2 -2 193 47 4 738 219 213 37 85 chrX 20178566 20178613 -146471683 - PB1D9 SINE Alu -34 86 42 4 738 1218 81 46 11 chrX 20178613 20178787 -146471509 - B2_Mm2 SINE B2 -14 181 2 4 738 219 213 37 85 chrX 20178787 20178821 -146471475 - PB1D9 SINE Alu -79 41 10 4 738 1366 97 5 0 chrX 20178889 20179074 -146471222 - B2_Mm1a SINE B2 -7 186 1 4 738 203 217 28 28 chrX 20179136 20179207 -146471089 + (TTAA)n Simple_repeat Simple_repeat 4 74 0 4 738 551 281 57 62 chrX 20179255 20179464 -146470832 - ID_B1 SINE B4 -15 209 2 4 738 434 143 0 0 chrX 20179475 20179545 -146470751 + RMER15 LTR ERVL 340 409 -166 4 738 3553 46 82 0 chrX 20179609 20180048 -146470248 - MT2C_Mm LTR ERVL 0 475 1 4 738 853 202 6 0 chrX 20180159 20180332 -146469964 - L1M2 LINE L1 -1447 4696 4523 4 738 814 279 34 5 chrX 20180368 20180577 -146469719 - Lx6 LINE L1 -27 7433 7219 4 738 625 264 53 37 chrX 20180591 20180835 -146469461 - L1_Mur3 LINE L1 -371 5509 5262 4 738 1463 153 59 144 chrX 20180869 20181259 -146469037 + RLTR41 LTR ERV1 85 441 -5 4 738 476 288 0 0 chrX 20181246 20181357 -146468939 - B3A SINE B2 -49 149 39 4 738 1617 171 77 12 chrX 20181419 20181744 -146468552 - MTC LTR MaLR -74 347 2 4 738 186 43 0 0 chrX 20181809 20181832 -146468464 + (TTA)n Simple_repeat Simple_repeat 2 24 0 4 738 1145 29 35 7 chrX 20181832 20181973 -146468323 - B1_Mm SINE Alu -2 145 1 4 738 8529 44 0 6 chrX 20181980 20183286 -146467010 - L1Md_F2 LINE L1 -1 6581 5286 4 738 513 279 106 14 chrX 20183318 20183460 -146466836 - RSINE1 SINE B4 -10 155 1 4 92 7974 91 18 3 chrX 20183486 20185112 -146465184 - L1_Mus4 LINE L1 0 6636 4984 4 739 211 176 17 50 chrX 20185218 20185278 -146465018 + T-rich Low_complexity Low_complexity 3 60 0 4 739 682 201 138 0 chrX 20185279 20185438 -146464858 + MTD LTR MaLR 15 195 -224 4 739 225 269 0 0 chrX 20185442 20185494 -146464802 + ORR1B1 LTR MaLR 145 196 -198 4 739 816 65 0 0 chrX 20185503 20185610 -146464686 + (TCTCCC)n Simple_repeat Simple_repeat 3 109 0 4 739 1299 269 103 33 chrX 20185662 20186119 -146464177 - Lx7 LINE L1 -333 7363 6875 4 739 962 184 109 10 chrX 20186563 20186755 -146463541 - B3 SINE B2 -5 211 1 4 739 242 273 0 0 chrX 20187858 20187913 -146462383 + ID4 SINE ID 19 73 -10 4 739 284 271 175 15 chrX 20187950 20188156 -146462140 + L1ME3A LINE L1 5739 5977 -196 4 739 568 292 12 24 chrX 20188156 20188321 -146461975 + RSINE1 SINE B4 3 165 0 4 739 1423 104 16 0 chrX 20188439 20188631 -146461665 + B2_Mm2 SINE B2 1 195 0 4 739 996 39 117 0 chrX 20188638 20188766 -146461530 + B1_Mus1 SINE Alu 1 143 -5 4 739 195 167 0 0 chrX 20188780 20188822 -146461474 + A-rich Low_complexity Low_complexity 1 42 0 4 739 407 257 27 18 chrX 20188875 20188986 -146461310 + PB1D7 SINE Alu 3 114 -6 4 739 397 188 0 0 chrX 20188997 20189066 -146461230 + B3 SINE B2 1 69 -147 4 739 353 280 10 20 chrX 20189634 20189736 -146460560 + B3 SINE B2 106 206 -10 4 739 6453 39 8 0 chrX 20190063 20190836 -146459460 + L1Md_T LINE L1 5804 6582 0 4 739 815 240 138 52 chrX 20190884 20190952 -146459344 - B4 SINE B4 0 292 206 4 739 1461 80 0 0 chrX 20190952 20191140 -146459156 - B2_Mm1t SINE B2 -4 189 2 4 739 815 240 138 52 chrX 20191140 20191339 -146458957 - B4 SINE B4 -87 205 2 4 739 697 172 158 48 chrX 20191654 20191819 -146458477 - U2 snRNA snRNA -3 185 3 4 739 892 176 162 20 chrX 20191948 20192145 -146458151 + URR1B DNA MER1_type 1 225 0 4 739 252 363 124 0 chrX 20193026 20193187 -146457109 + L2a LINE L2 2906 3086 -340 4 739 414 246 144 0 chrX 20193588 20193706 -146456590 - MIR SINE MIR -107 155 21 4 739 255 284 65 151 chrX 20193728 20193927 -146456369 + MIR SINE MIR 47 228 -34 4 739 228 250 26 26 chrX 20196614 20196692 -146453604 - ID4 SINE ID -3 80 3 4 739 1028 274 29 11 chrX 20197519 20197792 -146452504 - B4A SINE B4 -12 280 3 4 739 224 237 237 0 chrX 20197811 20197908 -146452388 - PB1D7 SINE Alu 0 120 1 4 739 348 287 74 0 chrX 20197926 20198034 -146452262 - PB1 SINE Alu -1 126 11 4 739 1091 75 14 0 chrX 20198243 20198389 -146451907 + B1_Mus1 SINE Alu 1 148 0 4 739 343 284 108 0 chrX 20198453 20198555 -146451741 + PB1D10 SINE Alu 2 114 -3 4 739 239 323 101 39 chrX 20198719 20198848 -146451448 - B1F SINE Alu -12 137 1 4 739 742 197 166 48 chrX 20198872 20199059 -146451237 - B3 SINE B2 -5 211 3 4 739 1482 65 16 0 chrX 20199336 20199521 -146450775 - B2_Mm2 SINE B2 -6 189 2 4 739 228 327 198 22 chrX 20199531 20199894 -146450402 - L1ME5 LINE L1 0 6194 5768 4 739 472 76 511 0 chrX 20199911 20200003 -146450293 + B1_Mus1 SINE Alu 1 139 -9 4 739 279 0 0 0 chrX 20200003 20200034 -146450262 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 739 435 252 19 9 chrX 20200055 20200163 -146450133 - B1F SINE Alu 0 149 41 4 739 549 176 90 56 chrX 20200213 20200357 -146449939 - B1_Mur2 SINE Alu 0 149 1 4 739 285 298 30 15 chrX 20200415 20200548 -146449748 - L1M3 LINE L1 -1103 5040 4903 4 739 256 262 33 0 chrX 20200727 20200788 -146449508 + tRNA-Ala-GCY_ tRNA tRNA 10 72 -3 4 739 963 39 0 0 chrX 20200832 20200959 -146449337 - B1_Mm SINE Alu 0 147 21 4 739 22 0 0 0 chrX 20201236 20201258 -146449038 + AT_rich Low_complexity Low_complexity 1 22 0 4 739 908 271 44 55 chrX 20201329 20201622 -146448674 - B4 SINE B4 0 292 3 4 739 790 142 35 28 chrX 20201637 20201782 -146448514 - B1_Mus2 SINE Alu -1 146 1 4 739 319 248 187 16 chrX 20201814 20201937 -146448359 + B1F SINE Alu 6 149 0 4 739 344 272 149 28 chrX 20201937 20201958 -146448338 + ID_B1 SINE B4 87 242 -50 4 739 303 271 0 0 chrX 20201961 20202031 -146448265 + ID4_ SINE ID 3 72 -11 4 739 488 206 0 144 chrX 20202242 20202299 -146447997 - PB1D9 SINE Alu -11 109 67 4 739 1699 26 0 0 chrX 20202299 20202492 -146447804 + B2_Mm1a SINE B2 1 193 0 4 739 488 206 0 144 chrX 20202492 20202559 -146447737 - PB1D9 SINE Alu -54 66 3 4 739 299 280 21 0 chrX 20202650 20202743 -146447553 + PB1D10 SINE Alu 22 116 -1 4 739 277 130 39 0 chrX 20203000 20203079 -146447217 - RSINE1 SINE B4 -33 132 10 4 739 487 321 73 36 chrX 20203102 20203322 -146446974 - Lx8 LINE L1 -187 7286 7059 4 739 332 200 24 24 chrX 20203402 20203484 -146446812 - PB1D9 SINE Alu -5 115 34 4 739 973 297 65 10 chrX 20203713 20204114 -146446182 - L1MA4 LINE L1 -392 5908 5486 4 739 1168 54 0 13 chrX 20204128 20204277 -146446019 + B1_Mm SINE Alu 1 147 0 4 739 198 0 0 0 chrX 20204277 20204299 -146445997 + (A)n Simple_repeat Simple_repeat 1 22 0 4 739 470 227 20 10 chrX 20204442 20204540 -146445756 + PB1D9 SINE Alu 9 107 -13 4 739 827 81 24 0 chrX 20204536 20204660 -146445636 + B1_Mus1 SINE Alu 22 148 0 4 739 1142 51 0 7 chrX 20204675 20204813 -146445483 + B1_Mm SINE Alu 1 137 -10 4 739 240 59 0 0 chrX 20204813 20204847 -146445449 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 739 593 218 87 17 chrX 20204854 20205027 -146445269 + B2_Mm2 SINE B2 1 185 -10 4 739 328 290 0 0 chrX 20205185 20205254 -146445042 - B4 SINE B4 -8 284 216 4 739 569 240 72 0 chrX 20205262 20205387 -146444909 - RSINE1 SINE B4 -6 159 26 4 739 442 181 27 45 chrX 20205453 20205563 -146444733 - B1_Mur2 SINE Alu -1 148 41 4 739 360 328 45 64 chrX 20205491 20205693 -146444603 - B4 SINE B4 -88 204 7 4 739 385 235 29 0 chrX 20205737 20205839 -146444457 - L1ME2z LINE L1 0 6444 6340 4 739 962 246 5 5 chrX 20205980 20206184 -146444112 - B3 SINE B2 -11 205 2 4 739 1357 95 5 10 chrX 20206220 20206412 -146443884 - B2_Mm1a SINE B2 0 193 3 4 739 430 212 50 58 chrX 20206442 20206562 -146443734 - PB1D9 SINE Alu 0 120 2 4 739 1114 189 127 16 chrX 20206612 20206864 -146443432 + Lx8 LINE L1 7181 7460 -13 4 739 758 247 14 0 chrX 20206921 20207067 -146443229 + B1_Mur1 SINE Alu 2 149 0 4 739 492 258 108 70 chrX 20207112 20207222 -146443074 + L1MD3 LINE L1 7313 7420 -575 4 739 734 216 108 20 chrX 20207222 20207425 -146442871 - ID_B1 SINE B4 -3 221 1 4 739 492 258 108 70 chrX 20207425 20207601 -146442695 + L1MD3 LINE L1 7421 7610 -385 4 739 518 222 37 0 chrX 20207680 20207788 -146442508 + PB1D9 SINE Alu 6 117 -3 4 739 342 286 29 133 chrX 20207856 20207888 -146442408 + B3A SINE B2 11 42 -156 4 739 951 130 0 46 chrX 20207888 20208041 -146442255 + B1_Mus2 SINE Alu 2 147 0 5 739 1417 89 5 0 chrX 20208043 20208234 -146442062 + B2_Mm1a SINE B2 2 193 0 5 739 342 286 29 133 chrX 20208234 20208408 -146441888 + B3A SINE B2 43 198 0 4 739 383 186 148 17 chrX 20208471 20208586 -146441710 + L1MD3 LINE L1 7858 7987 -8 4 739 529 238 108 10 chrX 20208575 20208770 -146441526 + L1M4 LINE L1 5133 5346 -800 5 739 337 282 14 33 chrX 20208788 20208894 -146441402 - PB1D10 SINE Alu -41 108 7 5 739 21 36 0 0 chrX 20208894 20208922 -146441374 + AT_rich Low_complexity Low_complexity 1 28 0 5 739 343 257 56 19 chrX 20208946 20209053 -146441243 - PB1D7 SINE Alu -9 111 1 5 739 276 30 0 0 chrX 20209162 20209195 -146441101 + (TTGG)n Simple_repeat Simple_repeat 3 35 0 5 739 326 63 48 48 chrX 20209198 20209281 -146441015 + T-rich Low_complexity Low_complexity 2 84 0 5 739 1162 62 7 0 chrX 20209284 20209430 -146440866 - B1_Mus1 SINE Alu 0 148 2 5 739 417 267 8 98 chrX 20209710 20209843 -146440453 - RSINE1 SINE B4 -33 132 12 5 739 328 228 250 0 chrX 20209870 20209962 -146440334 - PB1D10 SINE Alu -1 116 2 5 739 302 283 9 62 chrX 20210020 20210133 -146440163 + PB1D10 SINE Alu 6 112 -5 5 739 557 220 4 0 chrX 20210137 20210255 -146440041 + B1_Mus1 SINE Alu 1 120 0 5 739 628 225 31 4 chrX 20210343 20210517 -146439779 - B3 SINE B2 -7 188 2 5 739 23 33 0 0 chrX 20210592 20210622 -146439674 + AT_rich Low_complexity Low_complexity 1 30 0 5 739 739 240 15 40 chrX 20210628 20210828 -146439468 - B3A SINE B2 -3 195 1 5 739 237 228 35 0 chrX 20211082 20211139 -146439157 - B1_Mm SINE Alu 0 147 89 5 739 479 264 112 0 chrX 20211464 20211589 -146438707 - ID_B1 SINE B4 -16 208 70 5 739 222 278 74 0 chrX 20211833 20211887 -146438409 - PB1 SINE Alu -52 75 18 5 739 240 308 119 8 chrX 20211845 20211891 -146438405 - ID_B1 SINE B4 -85 139 9 5 739 242 292 28 0 chrX 20211891 20211963 -146438333 - ID4_ SINE ID -1 82 9 5 739 1015 92 35 7 chrX 20211986 20212129 -146438167 + B1_Mm SINE Alu 1 147 0 5 739 453 255 93 60 chrX 20212223 20212373 -146437923 - B3A SINE B2 -3 195 41 5 739 342 45 0 0 chrX 20214685 20214729 -146435567 + (GGA)n Simple_repeat Simple_repeat 1 44 0 5 739 241 305 69 58 chrX 20215656 20215743 -146434553 - MIR SINE MIR -157 105 18 5 739 196 111 44 0 chrX 20216682 20216727 -146433569 + CT-rich Low_complexity Low_complexity 2 48 0 5 739 198 0 0 0 chrX 20217115 20217137 -146433159 + (TCCC)n Simple_repeat Simple_repeat 3 24 0 5 739 308 277 20 54 chrX 20218081 20218230 -146432066 + CT-rich Low_complexity Low_complexity 3 146 0 5 739 200 314 0 0 chrX 20219381 20219432 -146430864 + C-rich Low_complexity Low_complexity 1 51 0 5 739 489 131 0 0 chrX 20219547 20219631 -146430665 + (TG)n Simple_repeat Simple_repeat 1 84 0 5 739 192 40 0 0 chrX 20220001 20220026 -146430270 + (CAG)n Simple_repeat Simple_repeat 1 25 0 5 739 220 277 186 9 chrX 20220180 20220293 -146430003 + MIR SINE MIR 5 137 -125 5 739 966 230 44 5 chrX 20223351 20223556 -146426740 - B3 SINE B2 -2 214 2 5 739 390 292 174 8 chrX 20223721 20223842 -146426454 + ID_B1 SINE B4 82 222 -2 5 739 321 316 0 69 chrX 20223881 20223983 -146426313 + B1F SINE Alu 1 95 -54 5 739 1197 56 0 0 chrX 20224191 20224333 -146425963 + B1_Mus1 SINE Alu 1 142 -6 5 739 290 147 130 14 chrX 20226069 20226138 -146424158 - MTD LTR MaLR 0 419 343 5 739 356 305 163 18 chrX 20228709 20228936 -146421360 + L1ME2 LINE L1 5717 5976 -188 5 739 300 267 63 53 chrX 20229113 20229208 -146421088 - ID_B1 SINE B4 -6 218 123 5 739 284 184 98 45 chrX 20229206 20229335 -146420961 - B3 SINE B2 -2 193 47 5 739 1000 92 0 28 chrX 20229357 20229502 -146420794 - B2_Mm2 SINE B2 -54 141 1 5 739 302 276 0 0 chrX 20229502 20229557 -146420739 - B1F2 SINE Alu -94 55 1 5 739 1295 94 22 0 chrX 20229586 20229766 -146420530 + B2_Mm2 SINE B2 2 185 -10 5 739 405 270 22 0 chrX 20230022 20230111 -146420185 - B3 SINE B2 -125 91 1 5 739 257 156 0 0 chrX 20230132 20230177 -146420119 + L1MD3 LINE L1 7406 7450 -545 5 739 1164 71 148 0 chrX 20230177 20230346 -146419950 - B2_Mm2 SINE B2 0 195 2 5 739 409 335 77 29 chrX 20230476 20230722 -146419574 + L2a LINE L2 3139 3396 -30 5 739 328 278 0 115 chrX 20230876 20230998 -146419298 + PB1 SINE Alu 1 108 -19 5 739 749 163 62 34 chrX 20231229 20231241 -146419055 - B1_Mur4 SINE Alu 0 150 141 5 739 227 54 27 0 chrX 20231241 20231278 -146419018 + (TTG)n Simple_repeat Simple_repeat 2 39 0 5 739 755 136 59 3 chrX 20231278 20231411 -146418885 - B1_Mus1 SINE Alu -10 140 1 5 739 359 0 99 0 chrX 20231470 20231541 -146418755 + (TA)n Simple_repeat Simple_repeat 1 78 0 5 739 508 246 9 0 chrX 20231706 20231820 -146418476 - ID_B1 SINE B4 -2 222 108 5 739 250 301 125 39 chrX 20231839 20231864 -146418432 - ID_B1 SINE B4 -7 217 84 5 739 379 229 61 20 chrX 20231864 20231962 -146418334 - B1F SINE Alu -45 104 3 5 739 445 350 132 25 chrX 20231981 20232342 -146417954 + L2a LINE L2 2405 2811 -608 5 739 326 250 25 12 chrX 20232342 20232423 -146417873 + ID4_ SINE ID 1 82 -1 5 739 445 350 132 25 chrX 20232423 20232462 -146417834 + L2a LINE L2 2812 2847 -572 5 739 1064 71 35 0 chrX 20232471 20232612 -146417684 + B1_Mus2 SINE Alu 2 147 0 5 739 1363 291 104 48 chrX 20232629 20232966 -146417330 - Lx9 LINE L1 -695 6949 6595 5 739 1276 188 9 0 chrX 20232966 20233190 -146417106 + URR1A DNA MER1_type 1 226 0 5 739 1363 291 104 48 chrX 20233190 20233476 -146416820 - Lx9 LINE L1 -1050 6594 6291 5 739 396 0 0 0 chrX 20233515 20233559 -146416737 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 5 739 529 289 173 0 chrX 20233570 20233743 -146416553 - B4A SINE B4 -88 204 2 5 739 194 260 115 13 chrX 20234144 20234222 -146416074 + L2a LINE L2 3160 3245 -181 5 739 307 296 46 0 chrX 20234312 20234420 -146415876 - BC1_Mm scRNA scRNA -31 121 9 5 739 668 154 8 0 chrX 20234479 20234602 -146415694 + (TA)n Simple_repeat Simple_repeat 2 125 0 5 739 445 274 37 55 chrX 20234826 20234966 -146415330 + ID_B1 SINE B4 73 202 -22 5 739 215 197 41 27 chrX 20235035 20235108 -146415188 + L2a LINE L2 3258 3331 -95 5 739 410 352 68 6 chrX 20236726 20236889 -146413407 - MIRb SINE MIR -59 209 37 5 739 540 0 0 0 chrX 20236945 20237005 -146413291 + (TCTCC)n Simple_repeat Simple_repeat 3 62 0 5 739 1327 50 6 11 chrX 20237068 20237249 -146413047 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 5 739 1167 36 30 54 chrX 20237249 20237772 -146412524 + (TCCCC)n Simple_repeat Simple_repeat 1 510 0 5 739 202 160 40 0 chrX 20237935 20237985 -146412311 + CT-rich Low_complexity Low_complexity 5 56 0 5 739 303 279 0 37 chrX 20238040 20238122 -146412174 - PB1D10 SINE Alu -34 83 5 5 739 238 213 0 0 chrX 20238180 20238227 -146412069 - MIR SINE MIR -27 235 189 5 739 180 0 0 0 chrX 20238456 20238476 -146411820 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 5 739 321 96 330 59 chrX 20238809 20238918 -146411378 - B2_Mm2 SINE B2 -9 184 47 5 739 1188 74 49 0 chrX 20238953 20239116 -146411180 - B2_Mm1t SINE B2 -21 172 2 5 739 485 194 58 0 chrX 20239122 20239225 -146411071 - PB1D9 SINE Alu -5 115 7 5 739 723 184 56 0 chrX 20239281 20239406 -146410890 - B1_Mus2 SINE Alu -13 134 3 5 739 459 0 0 0 chrX 20239445 20239496 -146410800 + (CTG)n Simple_repeat Simple_repeat 2 52 0 5 739 552 214 10 0 chrX 20241534 20241632 -146408664 - PB1D9 SINE Alu -15 105 7 5 739 233 304 30 127 chrX 20241542 20241556 -146408740 - MT2B LTR ERVL -351 250 227 5 739 329 321 24 12 chrX 20241556 20241641 -146408655 - B4 SINE B4 -124 168 83 5 739 233 304 30 127 chrX 20241641 20241708 -146408588 - MT2B LTR ERVL -351 226 101 5 739 1191 62 0 0 chrX 20242005 20242151 -146408145 + B1_Mus2 SINE Alu 2 147 0 5 739 350 186 57 0 chrX 20242772 20242842 -146407454 - PB1D9 SINE Alu -6 114 41 5 739 337 143 40 67 chrX 20242854 20242929 -146407367 + RLTR25A LTR ERVK 500 572 -531 5 739 871 62 0 26 chrX 20242866 20242981 -146407315 + B1_Mm SINE Alu 36 147 0 5 739 781 123 22 52 chrX 20242981 20243053 -146407243 - B3 SINE B2 0 216 138 5 739 243 88 0 0 chrX 20243053 20243087 -146407209 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 5 739 1147 66 20 0 chrX 20243087 20243238 -146407058 - B2_Mm1a SINE B2 -33 160 7 5 739 258 152 0 42 chrX 20243241 20243289 -146407007 - B2_Mm2 SINE B2 -102 93 48 5 739 1033 128 52 0 chrX 20243348 20243520 -146406776 - B2_Mm2 SINE B2 -14 181 1 5 739 234 283 0 0 chrX 20243520 20243573 -146406723 - B1F2 SINE Alu -96 53 1 5 739 273 265 37 64 chrX 20244539 20244648 -146405648 + MIRb SINE MIR 88 193 -75 5 739 380 356 58 22 chrX 20244658 20244882 -146405414 + MIRb SINE MIR 22 253 -15 5 739 235 294 93 12 chrX 20245161 20245247 -146405049 + L2 LINE L2 462 554 -2865 5 739 271 353 83 8 chrX 20245272 20245392 -146404904 + MIR SINE MIR 1 129 -133 5 739 289 173 0 37 chrX 20245460 20245514 -146404782 + PB1D9 SINE Alu 68 119 -1 5 739 326 258 168 66 chrX 20246623 20246760 -146403536 + MIR SINE MIR 83 240 -28 5 739 594 131 9 53 chrX 20248621 20248734 -146401562 - URR1B DNA MER1_type 0 225 118 5 739 230 98 49 0 chrX 20250262 20250303 -146399993 + (TTTTC)n Simple_repeat Simple_repeat 3 45 0 5 739 398 159 0 24 chrX 20250303 20250387 -146399909 + CT-rich Low_complexity Low_complexity 4 85 0 5 739 433 73 286 135 chrX 20250506 20250632 -146399664 - B2_Mm2 SINE B2 -4 191 47 5 739 914 87 20 61 chrX 20250635 20250782 -146399514 - B2_Mm2 SINE B2 -54 141 1 5 739 21 0 0 0 chrX 20250851 20250872 -146399424 + AT_rich Low_complexity Low_complexity 1 21 0 6 739 347 132 0 5 chrX 20250894 20250956 -146399340 + Lx5 LINE L1 6734 6809 -249 6 739 216 0 0 0 chrX 20250981 20251005 -146399291 + (TA)n Simple_repeat Simple_repeat 2 25 0 6 739 563 302 23 69 chrX 20251015 20251189 -146399107 - B3 SINE B2 -33 183 18 6 739 820 285 271 11 chrX 20251262 20251611 -146398685 - MER68 LTR ERVL -87 476 36 6 739 288 272 49 66 chrX 20251759 20251881 -146398415 + MT2B LTR ERVL 145 264 -337 6 739 379 265 71 35 chrX 20251774 20251803 -146398493 + ID_B1 SINE B4 79 224 0 6 739 579 146 27 0 chrX 20251803 20251915 -146398381 + B1_Mus2 SINE Alu 29 149 0 6 739 500 147 165 10 chrX 20251996 20252099 -146398197 + B1_Mur2 SINE Alu 30 148 -1 6 739 284 243 28 14 chrX 20252273 20252344 -146397952 - L2 LINE L2 -541 2878 2807 6 739 347 271 11 34 chrX 20253426 20253514 -146396782 + PB1D10 SINE Alu 31 116 -1 6 739 353 250 0 0 chrX 20253589 20253653 -146396643 + B1_Mus2 SINE Alu 2 65 -82 6 739 741 185 95 58 chrX 20253696 20253885 -146396411 + B3 SINE B2 9 204 -12 6 739 997 56 0 0 chrX 20253895 20254021 -146396275 - B1_Mus1 SINE Alu -21 127 2 6 739 534 213 45 52 chrX 20253915 20254038 -146396258 - B4 SINE B4 -95 197 76 6 739 931 227 11 34 chrX 20254038 20254216 -146396080 + B3A SINE B2 1 174 -24 6 739 452 195 154 41 chrX 20254221 20254344 -146395952 - ID_B1 SINE B4 0 224 88 6 739 229 255 78 87 chrX 20254266 20254369 -146395927 - MT2B2 LTR ERVL -332 252 151 6 739 396 0 0 0 chrX 20255571 20255615 -146394681 + (TC)n Simple_repeat Simple_repeat 2 45 0 6 739 534 31 0 0 chrX 20255615 20255678 -146394618 + (TA)n Simple_repeat Simple_repeat 1 64 0 6 739 235 278 258 7 chrX 20256173 20256348 -146393948 + MIRb SINE MIR 18 238 -30 6 739 316 256 61 0 chrX 20258859 20258941 -146391355 - L2 LINE L2 -520 2899 2813 6 739 210 294 35 0 chrX 20259415 20259500 -146390796 + C-rich Low_complexity Low_complexity 2 89 0 6 739 993 104 141 0 chrX 20260127 20260290 -146390006 + B2_Mm2 SINE B2 1 186 -9 6 739 951 131 28 0 chrX 20260388 20260533 -146389763 - B1_Mur4 SINE Alu 0 150 2 6 739 249 108 0 0 chrX 20260661 20260698 -146389598 + (T)n Simple_repeat Simple_repeat 1 37 0 6 739 875 65 194 0 chrX 20260698 20260822 -146389474 - B1_Mus1 SINE Alu 0 148 1 6 739 343 188 188 0 chrX 20261728 20261808 -146388488 + PB1D10 SINE Alu 23 117 0 6 739 351 283 119 40 chrX 20262114 20262265 -146388031 + B3 SINE B2 35 197 -19 6 739 688 232 63 73 chrX 20262237 20262428 -146387868 - B3 SINE B2 -26 190 2 6 739 558 287 14 14 chrX 20262468 20262526 -146387770 + ID SINE ID 25 82 -142 6 739 402 252 68 0 chrX 20262526 20262629 -146387667 + PB1D7 SINE Alu 1 110 -10 6 739 220 176 294 0 chrX 20262636 20262687 -146387609 + RSINE1 SINE B4 57 122 -43 6 739 1155 62 14 7 chrX 20262727 20262874 -146387422 - B1_Mus1 SINE Alu 0 148 1 6 739 288 337 0 24 chrX 20262952 20263037 -146387259 - RSINE1 SINE B4 -82 83 1 6 739 663 165 59 92 chrX 20263041 20263194 -146387102 - B1_Mur2 SINE Alu 0 149 2 6 739 318 50 0 0 chrX 20263236 20263276 -146387020 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 739 1218 62 0 0 chrX 20263501 20263645 -146386651 + B1_Mus1 SINE Alu 1 144 -4 6 739 521 180 140 0 chrX 20263661 20263761 -146386535 - B3A SINE B2 -84 114 1 6 739 581 204 266 6 chrX 20263826 20264003 -146386293 + ID_B1 SINE B4 2 224 0 6 739 243 330 57 0 chrX 20264173 20264261 -146386035 - L2a LINE L2 -333 3093 3001 6 739 267 54 0 0 chrX 20265720 20265757 -146384539 + (CCG)n Simple_repeat Simple_repeat 2 38 0 6 739 28 48 0 0 chrX 20265863 20265905 -146384391 + GC_rich Low_complexity Low_complexity 1 42 0 6 739 1130 108 18 0 chrX 20266867 20267034 -146383262 + URR1A DNA MER1_type 57 226 0 6 739 1292 20 7 0 chrX 20267582 20267728 -146382568 + B1_Mus2 SINE Alu 1 147 0 6 739 539 219 4 2 chrX 20267790 20267899 -146382397 + B3A SINE B2 2 112 -83 6 739 437 309 63 73 chrX 20269111 20269397 -146380899 - L2a LINE L2 -40 3386 3104 6 739 1336 87 27 0 chrX 20269515 20269699 -146380597 + B2_Mm2 SINE B2 1 189 -6 6 739 303 28 0 0 chrX 20271896 20271932 -146378364 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 6 739 1074 59 0 43 chrX 20271932 20272073 -146378223 - B1_Mus1 SINE Alu -12 136 2 6 739 1174 52 0 0 chrX 20274825 20274961 -146375335 - B1_Mus2 SINE Alu -11 136 1 6 739 490 221 38 9 chrX 20274965 20275070 -146375226 - ID_B1 SINE B4 -48 176 69 6 739 353 293 0 24 chrX 20275062 20275146 -146375150 - B1F1 SINE Alu -55 94 13 6 739 470 235 49 0 chrX 20275134 20275263 -146375033 + B1_Mur2 SINE Alu 13 149 0 6 739 571 274 77 77 chrX 20277734 20277823 -146372473 + B4 SINE B4 4 220 -68 6 739 799 126 31 8 chrX 20277823 20277951 -146372345 + B1_Mus1 SINE Alu 12 142 -6 6 739 898 240 10 5 chrX 20277944 20278153 -146372143 + B4A SINE B4 81 290 -2 6 739 775 163 0 0 chrX 20278469 20278599 -146371697 + B1_Mus1 SINE Alu 10 139 -9 6 739 216 0 0 0 chrX 20278599 20278623 -146371673 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 739 1030 45 105 0 chrX 20279462 20279595 -146370701 - B1_Mus2 SINE Alu 0 147 1 6 739 456 191 20 69 chrX 20279666 20279767 -146370529 + PB1D7 SINE Alu 22 117 -3 6 739 234 302 234 16 chrX 20279872 20280000 -146370296 - Charlie1 DNA MER1_type -2621 160 5 6 739 205 235 222 10 chrX 20280001 20280100 -146370196 + MIR SINE MIR 9 128 -134 6 739 390 294 20 14 chrX 20280249 20280397 -146369899 + B1F SINE Alu 1 149 0 6 739 698 231 154 0 chrX 20280482 20280664 -146369632 - B3 SINE B2 -5 211 2 6 739 765 232 65 119 chrX 20282211 20282597 -146367699 + L1MC4 LINE L1 7526 7890 -152 6 739 1066 201 82 7 chrX 20282614 20282895 -146367401 + L1MA8 LINE L1 5989 6290 -1 6 739 412 205 220 8 chrX 20283011 20283129 -146367167 - B1F2 SINE Alu -6 143 1 6 739 25 31 0 0 chrX 20283512 20283544 -146366752 + AT_rich Low_complexity Low_complexity 1 32 0 6 739 244 289 29 88 chrX 20283567 20283738 -146366558 + L2 LINE L2 2848 3008 -411 6 739 363 331 89 6 chrX 20283768 20283926 -146366370 - MER110-int LTR ERV1 -2315 2332 2162 6 739 690 118 78 8 chrX 20284102 20284230 -146366066 + L1MB5 LINE L1 6038 6174 0 6 739 236 254 14 27 chrX 20284627 20284700 -146365596 - B4A SINE B4 -220 72 1 6 739 328 288 88 124 chrX 20284700 20284825 -146365471 - B4A SINE B4 -64 228 105 6 739 871 179 7 0 chrX 20284825 20284970 -146365326 - B1_Mur4 SINE Alu -4 146 1 6 739 328 288 88 124 chrX 20284970 20285025 -146365271 - B4A SINE B4 -188 104 55 6 739 1377 91 16 0 chrX 20285333 20285520 -146364776 - B2_Mm1a SINE B2 -3 190 1 6 739 1339 61 72 0 chrX 20285664 20285845 -146364451 - B2_Mm2 SINE B2 0 195 2 6 739 263 321 57 0 chrX 20285879 20285985 -146364311 + PB1D10 SINE Alu 1 112 -5 6 739 268 214 269 10 chrX 20286029 20286133 -146364163 + ID_B1 SINE B4 88 218 -6 6 739 401 252 0 51 chrX 20286355 20286472 -146363824 + PB1D10 SINE Alu 5 115 -2 6 739 617 189 78 16 chrX 20286626 20286755 -146363541 + B1_Mur2 SINE Alu 13 149 0 6 739 674 192 48 109 chrX 20286759 20286969 -146363327 + B3A SINE B2 2 198 0 6 739 244 328 0 0 chrX 20287577 20287644 -146362652 - ID4 SINE ID -14 69 3 6 739 470 214 129 134 chrX 20287716 20287910 -146362386 + B3A SINE B2 1 193 -5 6 739 864 109 72 7 chrX 20287914 20288052 -146362244 + B1_Mus2 SINE Alu 1 147 0 6 739 256 137 72 121 chrX 20288436 20288519 -146361777 + PB1D9 SINE Alu 42 120 0 6 739 243 305 45 30 chrX 20288505 20288540 -146361756 + B4 SINE B4 63 196 -96 6 739 438 174 10 52 chrX 20288540 20288637 -146361659 + B1F1 SINE Alu 15 107 -42 6 739 209 215 12 81 chrX 20290764 20290850 -146359446 + CT-rich Low_complexity Low_complexity 3 82 0 6 739 218 293 0 17 chrX 20292297 20292356 -146357940 - ID4 SINE ID 0 83 26 6 739 221 57 0 28 chrX 20292358 20292394 -146357902 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 739 1005 72 65 0 chrX 20292406 20292545 -146357751 - B1_Mus1 SINE Alu 0 148 1 6 739 592 133 17 0 chrX 20292606 20292726 -146357570 + (TA)n Simple_repeat Simple_repeat 2 123 0 6 739 481 229 19 9 chrX 20292737 20292843 -146357453 - PB1D9 SINE Alu -12 108 2 6 739 23 0 0 0 chrX 20292866 20292889 -146357407 + AT_rich Low_complexity Low_complexity 1 23 0 6 739 1665 36 0 0 chrX 20292891 20293084 -146357212 - B2_Mm1a SINE B2 0 193 1 6 739 1041 174 6 12 chrX 20293377 20293573 -146356723 + B3 SINE B2 23 216 0 6 739 479 257 114 34 chrX 20293586 20293735 -146356561 + RSINE1 SINE B4 5 165 0 6 739 262 288 48 9 chrX 20294578 20294683 -146355613 + PB1D10 SINE Alu 2 110 -7 6 739 779 162 28 14 chrX 20297529 20297673 -146352623 - B1_Mus2 SINE Alu -1 146 1 6 739 336 256 91 91 chrX 20298563 20298739 -146351557 - MER21B LTR ERV1 -494 369 194 7 739 266 296 65 43 chrX 20298876 20298968 -146351328 - MER21B LTR ERV1 -666 197 104 7 739 1188 29 0 0 chrX 20299145 20299281 -146351015 + B1_Mus2 SINE Alu 1 136 -11 7 739 270 0 0 0 chrX 20299281 20299311 -146350985 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 7 739 553 304 6 42 chrX 20299417 20299585 -146350711 - RSINE1 SINE B4 0 165 4 7 739 196 53 0 50 chrX 20299593 20299633 -146350663 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 7 739 235 284 81 0 chrX 20299652 20299726 -146350570 - ID_B1 SINE B4 -2 222 143 7 739 210 35 0 0 chrX 20299815 20299844 -146350452 - B1_Mm SINE Alu -28 119 91 7 739 624 280 0 0 chrX 20299938 20300081 -146350215 - ID_B1 SINE B4 -2 222 80 7 739 958 251 108 11 chrX 20300082 20300460 -146349836 - L1M3 LINE L1 -1156 4984 4570 7 739 329 253 130 43 chrX 20300477 20300638 -146349658 - L1MEc LINE L1 -5677 723 549 7 739 323 248 76 42 chrX 20300681 20300815 -146349481 + B1F1 SINE Alu 1 138 -11 7 739 480 227 87 43 chrX 20300815 20300953 -146349343 + B3A SINE B2 2 145 -53 7 739 261 0 0 0 chrX 20300957 20300986 -146349310 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 739 305 232 36 108 chrX 20300992 20301004 -146349292 + MT2B LTR ERVL 153 255 -346 7 739 586 162 10 0 chrX 20301004 20301103 -146349193 + B1_Mur3 SINE Alu 3 102 -47 7 739 1174 76 0 0 chrX 20301126 20301270 -146349026 - B1_Mus1 SINE Alu -4 144 1 7 739 533 294 20 0 chrX 20301273 20301419 -146348877 - B1F SINE Alu 0 149 1 7 739 314 206 0 52 chrX 20301502 20301579 -146348717 - PB1D7 SINE Alu -1 119 47 7 739 281 256 242 56 chrX 20301579 20301614 -146348682 - ID_B1 SINE B4 0 224 14 7 739 281 288 0 0 chrX 20301614 20301680 -146348616 - BC1_Mm scRNA scRNA -73 79 14 7 739 302 270 45 23 chrX 20301708 20301806 -146348490 - B1F1 SINE Alu -20 107 2 7 739 22 56 0 0 chrX 20301851 20301887 -146348409 + AT_rich Low_complexity Low_complexity 1 36 0 7 739 846 98 0 0 chrX 20302202 20302324 -146347972 + (GGAA)n Simple_repeat Simple_repeat 4 125 0 7 739 212 273 15 0 chrX 20302810 20302876 -146347420 - ID4 SINE ID -16 67 1 7 739 710 188 8 0 chrX 20302895 20303023 -146347273 - B1_Mus2 SINE Alu -13 134 6 7 739 1053 240 149 7 chrX 20303322 20303624 -146346672 + Lx7 LINE L1 6184 6528 -1168 7 739 431 54 0 0 chrX 20303662 20303718 -146346578 + L1Md_F2 LINE L1 6514 6569 -13 7 739 481 73 12 147 chrX 20303725 20303855 -146346441 + L1Md_F2 LINE L1 6500 6582 0 7 739 2974 234 78 6 chrX 20303854 20304577 -146345719 + Lx7 LINE L1 6539 7313 -383 7 739 288 111 0 0 chrX 20304586 20304631 -146345665 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 7 739 312 250 20 89 chrX 20304632 20304733 -146345563 - PB1D9 SINE Alu -26 94 1 7 739 684 238 97 6 chrX 20304973 20305138 -146345158 - B3A SINE B2 -17 181 2 7 739 1101 82 7 0 chrX 20305415 20305561 -146344735 + B1_Mus1 SINE Alu 2 148 0 7 739 227 325 0 36 chrX 20305775 20305858 -146344438 - ID_B1 SINE B4 -25 199 120 7 739 1178 190 243 18 chrX 20305891 20306229 -146344067 + MTD LTR MaLR 1 414 -5 7 739 227 80 56 74 chrX 20306421 20306475 -146343821 - PB1D10 SINE Alu 0 117 65 7 739 248 227 0 0 chrX 20306482 20306526 -146343770 - RSINE1 SINE B4 -117 48 5 7 739 265 211 18 0 chrX 20306526 20306583 -146343713 - PB1D7 SINE Alu -2 118 61 7 739 191 61 30 0 chrX 20306615 20306648 -146343648 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 7 739 1313 95 16 0 chrX 20306711 20306900 -146343396 + B2_Mm1t SINE B2 1 192 -1 7 739 289 286 13 0 chrX 20306929 20307006 -146343290 - ID4_ SINE ID -1 82 5 7 739 1525 128 40 65 chrX 20307350 20307675 -146342621 + RLTRETN_Mm LTR ERVK 6 322 0 7 739 244 284 136 0 chrX 20307878 20307959 -146342337 - B1_Mm SINE Alu -55 92 1 7 739 260 286 91 45 chrX 20307888 20307974 -146342322 - MT2B2 LTR ERVL -345 239 147 7 739 795 10 29 0 chrX 20307974 20308078 -146342218 + (TCTA)n Simple_repeat Simple_repeat 2 108 0 7 739 260 286 91 45 chrX 20308078 20308123 -146342173 - MT2B2 LTR ERVL -438 146 102 7 739 288 295 39 0 chrX 20308081 20308159 -146342137 - ID_B1 SINE B4 -11 213 133 7 739 224 293 26 13 chrX 20308256 20308332 -146341964 - ID4 SINE ID -5 78 2 7 739 470 261 0 56 chrX 20308334 20308460 -146341836 - PB1D7 SINE Alu 0 120 2 7 739 30 0 0 0 chrX 20308470 20308500 -146341796 + AT_rich Low_complexity Low_complexity 1 30 0 7 739 674 224 7 26 chrX 20308599 20308750 -146341546 - B1_Mur2 SINE Alu 0 149 2 7 739 305 307 9 73 chrX 20308758 20308867 -146341429 - ID_B1 SINE B4 -8 216 115 7 739 853 258 14 14 chrX 20310034 20310246 -146340050 + B4 SINE B4 2 213 -79 7 739 266 50 25 0 chrX 20310252 20310292 -146340004 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 7 739 662 169 1 10 chrX 20310302 20310430 -146339866 - B1_Mur2 SINE Alu -20 129 3 7 739 1036 59 0 0 chrX 20310459 20310595 -146339701 + B1_Mm SINE Alu 12 147 0 7 739 818 164 13 0 chrX 20310595 20310754 -146339542 + GA-rich Low_complexity Low_complexity 3 163 0 7 739 1583 119 65 32 chrX 20310755 20311033 -146339263 + ORR1A4 LTR MaLR 43 329 0 7 739 378 42 0 0 chrX 20311050 20311098 -146339198 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 739 362 252 93 9 chrX 20311441 20311549 -146338747 - PB1D10 SINE Alu 0 117 1 7 739 198 0 0 0 chrX 20312010 20312032 -146338264 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 7 739 541 167 42 0 chrX 20312056 20312152 -146338144 - B1_Mur3 SINE Alu -8 141 42 7 739 214 0 0 157 chrX 20312155 20312257 -146338039 + (CTCTG)n Simple_repeat Simple_repeat 5 90 0 7 739 247 148 18 36 chrX 20312258 20312314 -146337982 - PB1D9 SINE Alu -61 59 5 7 739 229 306 24 47 chrX 20312314 20312385 -146337911 - B4 SINE B4 -148 144 21 7 739 550 154 135 0 chrX 20312587 20312691 -146337605 - Lx6 LINE L1 -648 6812 6695 7 739 1176 276 145 19 chrX 20312681 20313157 -146337139 + Lx4B LINE L1 6519 7054 -4 7 739 21 36 0 0 chrX 20313195 20313223 -146337073 + AT_rich Low_complexity Low_complexity 1 28 0 7 739 665 270 0 0 chrX 20313355 20313492 -146336804 - RSINE1 SINE B4 0 165 29 7 739 704 196 7 34 chrX 20313504 20313652 -146336644 - B1F SINE Alu 0 149 6 7 739 312 295 0 0 chrX 20314143 20314221 -146336075 + BC1_Mm scRNA scRNA 11 88 -64 7 739 1032 121 14 0 chrX 20314228 20314369 -146335927 + B1_Mur4 SINE Alu 3 145 -5 7 739 227 286 25 25 chrX 20314406 20314485 -146335811 + B4 SINE B4 2 80 -212 7 739 381 184 21 65 chrX 20314487 20314580 -146335716 + B3 SINE B2 128 216 0 7 739 469 206 29 0 chrX 20314603 20314705 -146335591 + MER2 DNA MER2_type 85 189 -156 7 739 270 241 0 0 chrX 20314717 20314775 -146335521 + MER2 DNA MER2_type 240 297 -48 7 739 251 250 15 15 chrX 20314776 20314841 -146335455 - Lx8 LINE L1 -253 7220 7156 7 739 278 312 0 0 chrX 20314931 20315008 -146335288 - Lx8 LINE L1 -355 7118 7042 7 739 861 272 14 0 chrX 20315268 20315485 -146334811 + ID_B1 SINE B4 4 223 -1 7 739 216 67 0 0 chrX 20315962 20315992 -146334304 + (TC)n Simple_repeat Simple_repeat 1 30 0 7 92 1053 142 0 0 chrX 20315992 20316198 -146334098 + (TG)n Simple_repeat Simple_repeat 1 206 0 7 740 478 322 14 20 chrX 20316211 20316357 -146333939 - RSINE1 SINE B4 -20 145 1 7 740 214 254 159 0 chrX 20316693 20316756 -146333540 + ID4 SINE ID 1 73 -10 7 740 234 0 0 0 chrX 20316828 20316854 -146333442 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 7 740 1201 43 0 0 chrX 20316856 20316997 -146333299 - B1_Mus2 SINE Alu -6 141 1 7 740 648 186 0 34 chrX 20317006 20317123 -146333173 - PB1D9 SINE Alu -7 113 1 7 740 222 136 0 0 chrX 20317152 20317196 -146333100 + (TCTA)n Simple_repeat Simple_repeat 3 46 0 7 740 378 0 0 0 chrX 20317198 20317240 -146333056 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 740 629 273 0 7 chrX 20317245 20317396 -146332900 - RSINE1 SINE B4 -14 151 2 7 740 383 229 97 22 chrX 20317418 20317552 -146332744 - RMER15 LTR ERVL 0 575 432 7 740 279 0 0 0 chrX 20317725 20317756 -146332540 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 740 627 243 27 40 chrX 20317764 20317914 -146332382 - B3A SINE B2 -47 151 4 7 740 263 233 135 14 chrX 20317914 20317988 -146332308 - PB1 SINE Alu -14 113 31 7 740 489 76 0 0 chrX 20317990 20318056 -146332240 + (TTCC)n Simple_repeat Simple_repeat 3 68 0 7 740 432 319 94 72 chrX 20318498 20318775 -146331521 - LTR75 LTR ERVL -86 476 194 7 740 526 263 8 8 chrX 20318960 20319079 -146331217 + B1F SINE Alu 24 142 -7 7 740 200 204 0 0 chrX 20319087 20319131 -146331165 + (CAGAGA)n Simple_repeat Simple_repeat 2 45 0 7 740 1814 257 40 37 chrX 20319580 20320160 -146330136 - Lx5 LINE L1 -16 7034 6506 7 740 197 111 0 43 chrX 20320214 20320261 -146330035 + T-rich Low_complexity Low_complexity 2 46 0 7 740 1236 61 49 0 chrX 20320542 20320706 -146329590 + L1_Mus3 LINE L1 6362 6533 -105 7 740 2306 53 56 0 chrX 20320708 20321028 -146329268 - ORR1A0 LTR MaLR -8 338 1 7 740 621 82 18 35 chrX 20321028 20321141 -146329155 + L1_Mus3 LINE L1 6527 6637 -1 7 740 232 235 20 0 chrX 20321222 20321273 -146329023 + MLT1A0 LTR MaLR 166 217 -148 7 740 369 315 0 85 chrX 20321268 20321297 -146328999 + ID_B1 SINE B4 63 224 0 7 740 714 229 0 27 chrX 20321297 20321445 -146328851 + B1_Mur2 SINE Alu 6 149 0 7 740 343 264 0 0 chrX 20321642 20321714 -146328582 - PB1D10 SINE Alu -36 81 10 7 740 257 303 0 101 chrX 20321863 20321962 -146328334 + RSINE1 SINE B4 77 165 0 8 740 1168 69 0 0 chrX 20322025 20322169 -146328127 + B1_Mus2 SINE Alu 1 144 -3 8 740 1620 6 2 0 chrX 20322169 20322697 -146327599 + (GGAGAA)n Simple_repeat Simple_repeat 1 529 0 8 740 211 202 20 29 chrX 20322849 20322951 -146327345 + CT-rich Low_complexity Low_complexity 1 101 0 8 740 1627 43 0 0 chrX 20323061 20323249 -146327047 + B2_Mm1a SINE B2 1 188 -5 8 740 281 138 0 30 chrX 20323729 20323796 -146326500 + T-rich Low_complexity Low_complexity 6 70 0 8 740 696 43 0 0 chrX 20323796 20323888 -146326408 - B1_Mm SINE Alu 0 147 56 8 740 1146 75 0 0 chrX 20323892 20324039 -146326257 - B1_Mus2 SINE Alu 0 147 1 8 740 585 239 176 11 chrX 20324040 20324222 -146326074 - B3 SINE B2 -4 212 1 8 740 382 173 12 36 chrX 20324292 20324376 -146325920 + B1F SINE Alu 68 149 0 8 740 300 263 0 38 chrX 20324637 20324716 -146325580 + B4A SINE B4 217 292 0 8 740 447 235 108 8 chrX 20324766 20324886 -146325410 + B1F SINE Alu 12 143 -6 8 740 288 318 47 0 chrX 20324907 20324992 -146325304 + B1F SINE Alu 1 89 -60 8 740 418 340 14 0 chrX 20325154 20325295 -146325001 - B1F SINE Alu -6 143 1 8 740 330 67 0 0 chrX 20325470 20325515 -146324781 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 8 740 307 299 18 53 chrX 20325515 20325620 -146324676 - PB1 SINE Alu -8 119 19 8 740 393 307 7 79 chrX 20325762 20325914 -146324382 + RSINE1 SINE B4 2 142 -23 8 740 988 244 169 0 chrX 20326058 20326337 -146323959 + Lx8 LINE L1 6197 6522 -951 8 740 835 170 7 0 chrX 20326443 20326584 -146323712 + B1_Mus1 SINE Alu 6 147 -1 8 740 468 286 0 9 chrX 20326616 20326722 -146323574 + PB1D7 SINE Alu 3 107 -13 8 740 369 278 117 27 chrX 20327290 20327401 -146322895 - RSINE1 SINE B4 -41 124 4 8 740 1136 82 0 0 chrX 20327674 20327820 -146322476 - B1_Mus2 SINE Alu 0 147 2 8 740 889 120 0 0 chrX 20328407 20328540 -146321756 - B1_Mus1 SINE Alu -3 145 13 8 740 235 293 0 0 chrX 20328680 20328738 -146321558 + B1F SINE Alu 81 138 -11 8 740 681 222 7 0 chrX 20328748 20328883 -146321413 + B1_Mur2 SINE Alu 1 136 -13 8 740 186 43 0 0 chrX 20328884 20328907 -146321389 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 8 740 297 75 0 0 chrX 20328911 20328951 -146321345 + (CAT)n Simple_repeat Simple_repeat 1 40 0 8 740 435 130 0 0 chrX 20328951 20329028 -146321268 + (TG)n Simple_repeat Simple_repeat 2 78 0 8 740 238 360 70 35 chrX 20329030 20329145 -146321151 - RSINE1 SINE B4 -46 119 1 8 740 725 263 93 4 chrX 20329209 20329434 -146320862 + L1MDb LINE L1 665 909 -5500 8 740 456 185 0 42 chrX 20329554 20329650 -146320646 + PB1D10 SINE Alu 26 117 0 8 740 240 213 82 0 chrX 20329655 20329716 -146320580 + L1MDb LINE L1 4458 4523 -1883 8 740 1069 45 0 8 chrX 20329717 20329851 -146320445 + B1_Mm SINE Alu 1 133 -14 8 740 216 0 0 0 chrX 20329851 20329875 -146320421 + (CAAAA)n Simple_repeat Simple_repeat 5 28 0 8 740 419 321 28 14 chrX 20330002 20330144 -146320152 + ID_B1 SINE B4 23 166 -58 8 740 660 173 15 73 chrX 20330685 20330822 -146319474 + B1_Mur2 SINE Alu 1 129 -20 8 740 782 191 7 7 chrX 20330859 20331007 -146319289 + B3 SINE B2 28 175 -41 8 740 1775 10 0 0 chrX 20331024 20331225 -146319071 + L1Md_A LINE L1 6382 6582 0 8 740 1034 86 0 30 chrX 20331256 20331424 -146318872 + B2_Mm1a SINE B2 28 190 -3 8 740 695 296 24 5 chrX 20331450 20331657 -146318639 - ID_B1 SINE B4 -3 221 11 8 740 908 297 42 22 chrX 20331659 20332158 -146318138 + L1M2 LINE L1 4091 4599 -1544 8 740 1100 92 20 10 chrX 20332181 20332479 -146317817 + (TTTC)n Simple_repeat Simple_repeat 1 301 0 8 740 588 191 100 31 chrX 20332479 20332609 -146317687 - B1_Mur2 SINE Alu -10 139 1 8 740 466 279 50 19 chrX 20332609 20332770 -146317526 + B3A SINE B2 31 196 -2 8 740 312 235 48 29 chrX 20332781 20332886 -146317410 + L1M2 LINE L1 4597 4703 -1440 8 740 1158 86 89 28 chrX 20332895 20333059 -146317237 + B2_Mm1t SINE B2 1 160 -33 8 740 324 0 0 0 chrX 20333059 20333095 -146317201 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 8 740 1158 86 89 28 chrX 20333095 20333110 -146317186 + B2_Mm1t SINE B2 161 189 -4 8 740 1224 55 0 0 chrX 20333120 20333266 -146317030 + B1_Mus1 SINE Alu 2 147 -1 8 740 638 109 0 10 chrX 20333267 20333369 -146316927 + (GAAAA)n Simple_repeat Simple_repeat 3 103 0 8 740 356 194 30 30 chrX 20333369 20333470 -146316826 + L1_Mur3 LINE L1 4659 4759 -1121 8 740 274 271 0 0 chrX 20333503 20333562 -146316734 + L1M2 LINE L1 4862 4920 -1223 8 740 478 25 49 12 chrX 20333599 20333680 -146316616 + (TCC)n Simple_repeat Simple_repeat 2 85 0 8 740 797 212 25 165 chrX 20333688 20333768 -146316528 - Lx6 LINE L1 -232 7228 7152 8 740 1014 116 0 7 chrX 20333768 20333916 -146316380 + B1_Mus1 SINE Alu 1 147 -1 8 740 3181 56 2 8 chrX 20333921 20334319 -146315977 - MTA_Mm LTR MaLR 0 396 1 8 740 797 212 25 165 chrX 20334319 20334469 -146315827 - Lx6 LINE L1 -309 7151 7025 8 740 570 269 145 74 chrX 20334473 20334810 -146315486 + MTE2a LTR MaLR 45 405 -14 8 740 1187 40 0 0 chrX 20334894 20335046 -146315250 - B2_Mm1t SINE B2 -7 186 35 8 740 2796 39 12 0 chrX 20335058 20335395 -146314901 - L1Md_F2 LINE L1 0 6582 6242 8 740 684 132 0 9 chrX 20335397 20335512 -146314784 - B2_Mm2 SINE B2 -81 114 1 8 740 210 250 16 16 chrX 20335576 20335637 -146314659 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 740 377 325 22 77 chrX 20335966 20336149 -146314147 - B4A SINE B4 -119 173 1 8 740 671 191 0 0 chrX 20336862 20336977 -146313319 - B3 SINE B2 -101 115 1 8 740 243 0 0 0 chrX 20337022 20337049 -146313247 + (T)n Simple_repeat Simple_repeat 1 27 0 8 740 1194 75 0 0 chrX 20337049 20337196 -146313100 - B1_Mus2 SINE Alu 0 147 1 8 740 503 234 8 46 chrX 20337380 20337510 -146312786 + B1F SINE Alu 20 144 -5 8 740 804 256 81 48 chrX 20337579 20337874 -146312422 + RMER5 LTR ERV1 1 305 -229 8 740 469 266 23 105 chrX 20337927 20338099 -146312197 + RSINE1 SINE B4 8 165 0 8 740 21 36 0 0 chrX 20338138 20338166 -146312130 + AT_rich Low_complexity Low_complexity 1 28 0 8 740 513 174 0 55 chrX 20338166 20338286 -146312010 + B1_Mur3 SINE Alu 1 108 -39 8 740 251 0 59 0 chrX 20338658 20338692 -146311604 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 8 740 265 269 60 0 chrX 20339050 20339117 -146311179 + Lx8 LINE L1 6647 6717 -756 8 740 2449 84 87 0 chrX 20339117 20339403 -146310893 + L1_Mus3 LINE L1 6249 6538 -100 8 740 186 43 0 0 chrX 20339403 20339426 -146310870 + (AGGGGG)n Simple_repeat Simple_repeat 1 23 0 8 740 2449 84 87 0 chrX 20339426 20339497 -146310799 + L1_Mus3 LINE L1 6539 6635 -3 8 740 38827 14 2 7 chrX 20339500 20344907 -146305389 + L1Md_A LINE L1 208 5586 -297 8 740 8792 22 0 0 chrX 20344908 20345901 -146304395 + L1Md_A LINE L1 5588 6580 -2 8 740 258 42 20 40 chrX 20345917 20345967 -146304329 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 8 740 302 239 265 0 chrX 20345979 20346096 -146304200 + B1_Mur1 SINE Alu 1 148 -1 8 740 399 204 56 22 chrX 20346106 20346196 -146304100 + RMER15-int LTR ERVL 4628 4720 -279 8 740 242 352 54 35 chrX 20346197 20346219 -146304077 + Lx8 LINE L1 6905 6924 -772 8 740 1188 62 0 0 chrX 20346219 20346365 -146303931 + B1_Mus1 SINE Alu 3 148 0 8 740 714 274 70 14 chrX 20346365 20346622 -146303674 + Lx8 LINE L1 6925 7201 -272 8 740 733 150 0 228 chrX 20346664 20346698 -146303598 + RLTR40 LTR ERVK 1 33 -784 8 740 867 65 169 0 chrX 20346698 20346822 -146303474 + B1_Mm SINE Alu 2 146 -1 8 740 733 150 0 228 chrX 20346822 20347011 -146303285 + RLTR40 LTR ERVK 34 173 -644 8 740 546 168 177 0 chrX 20347018 20347131 -146303165 + B1_Mur2 SINE Alu 11 143 -6 8 740 789 11 0 0 chrX 20347529 20347619 -146302677 + (TTC)n Simple_repeat Simple_repeat 2 91 0 8 740 1085 66 7 0 chrX 20347619 20347755 -146302541 - B1_Mus2 SINE Alu -9 138 2 8 740 422 211 39 0 chrX 20347840 20347944 -146302352 - PB1D9 SINE Alu 0 120 13 8 740 437 319 0 0 chrX 20348066 20348179 -146302117 - ID_B1 SINE B4 -21 203 91 8 740 419 280 24 8 chrX 20348260 20348386 -146301910 + B3 SINE B2 87 214 -2 8 740 395 239 88 122 chrX 20348431 20348566 -146301730 + B3A SINE B2 47 181 -17 8 740 572 297 35 0 chrX 20348566 20348711 -146301585 + RSINE1 SINE B4 2 151 -14 8 740 395 239 88 122 chrX 20348711 20348723 -146301573 + B3A SINE B2 182 189 -9 8 740 942 48 0 0 chrX 20348733 20348857 -146301439 + B1_Mus2 SINE Alu 1 124 -23 8 740 366 264 313 45 chrX 20348856 20349088 -146301208 - ORR1D2 LTR MaLR -69 301 8 8 740 262 280 155 35 chrX 20349107 20349281 -146301015 - Lx8 LINE L1 -436 7037 6843 8 740 659 254 0 0 chrX 20349284 20349414 -146300882 + B3 SINE B2 1 130 -86 8 740 1055 93 0 28 chrX 20349471 20349615 -146300681 - B1_Mur4 SINE Alu -10 140 1 8 740 218 268 171 23 chrX 20349744 20349832 -146300464 + B3 SINE B2 50 150 -66 8 740 276 120 0 0 chrX 20349845 20349895 -146300401 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 740 24 32 0 0 chrX 20349895 20349926 -146300370 + AT_rich Low_complexity Low_complexity 1 31 0 8 740 279 0 0 0 chrX 20350007 20350038 -146300258 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 8 740 1127 57 7 0 chrX 20350038 20350178 -146300118 - B1_Mus1 SINE Alu -7 141 1 8 740 1169 57 0 0 chrX 20350625 20350765 -146299531 + B1_Mus1 SINE Alu 1 140 -8 8 740 279 0 0 0 chrX 20350765 20350796 -146299500 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 740 546 307 0 24 chrX 20350891 20351058 -146299238 + RSINE1 SINE B4 3 165 0 8 740 646 200 14 21 chrX 20351076 20351219 -146299077 + B3 SINE B2 70 211 -5 8 740 1036 59 74 0 chrX 20351235 20351370 -146298926 - B1_Mm SINE Alu -1 146 2 9 740 320 277 41 34 chrX 20351373 20351519 -146298777 - B1F1 SINE Alu 0 149 3 9 740 935 24 16 0 chrX 20351714 20351838 -146298458 + B1_Mus2 SINE Alu 22 147 0 9 740 258 32 0 0 chrX 20351975 20352006 -146298290 + (GGAA)n Simple_repeat Simple_repeat 2 32 0 9 740 198 0 0 0 chrX 20352295 20352317 -146297979 + (T)n Simple_repeat Simple_repeat 1 22 0 9 740 858 62 108 0 chrX 20352326 20352455 -146297841 - B1_Mus1 SINE Alu 0 148 6 9 740 487 122 11 11 chrX 20353270 20353361 -146296935 + (TTCC)n Simple_repeat Simple_repeat 2 92 0 9 740 528 147 0 69 chrX 20353533 20353635 -146296661 + PB1D10 SINE Alu 21 115 -2 9 740 283 311 19 19 chrX 20353758 20353863 -146296433 - RSINE1 SINE B4 -17 148 44 9 740 257 241 0 33 chrX 20353903 20353963 -146296333 - AluF_3 SINE Alu -105 206 149 9 740 595 91 30 0 chrX 20353980 20354079 -146296217 + (TTCC)n Simple_repeat Simple_repeat 3 104 0 9 740 337 26 0 0 chrX 20354080 20354119 -146296177 + (TCC)n Simple_repeat Simple_repeat 1 39 0 9 740 671 128 0 18 chrX 20354119 20354230 -146296066 - B1_Mur3 SINE Alu -15 134 26 9 740 286 176 92 71 chrX 20354150 20354248 -146296048 - MT2B LTR ERVL -345 256 157 9 740 438 83 159 5 chrX 20354366 20354478 -146295818 - B2_Mm2 SINE B2 -3 192 46 9 740 1118 123 53 0 chrX 20354505 20354676 -146295620 - B2_Mm2 SINE B2 -14 181 2 9 740 680 156 8 23 chrX 20354701 20354832 -146295464 + MT2A LTR ERVL 1 129 -404 9 740 239 268 87 58 chrX 20354832 20354935 -146295361 + MT2A LTR ERVL 95 200 -333 9 740 1028 166 134 7 chrX 20354943 20355166 -146295130 + ORR1C2 LTR MaLR 56 331 -53 9 740 2443 187 204 19 chrX 20355166 20355788 -146294508 - RMER19A LTR ERVK 0 737 1 9 740 1028 175 145 12 chrX 20355788 20355832 -146294464 + ORR1C2 LTR MaLR 332 375 -9 9 740 237 284 20 30 chrX 20356025 20356125 -146294171 - ID4 SINE ID -41 111 13 9 740 1167 62 0 0 chrX 20356157 20356301 -146293995 - B1_Mus1 SINE Alu 0 148 5 9 740 183 129 0 0 chrX 20356326 20356357 -146293939 + (T)n Simple_repeat Simple_repeat 1 31 0 9 740 386 290 28 18 chrX 20356446 20356555 -146293741 - PB1D7 SINE Alu -7 113 4 9 740 869 242 81 23 chrX 20356693 20357009 -146293287 - L1MD1 LINE L1 -188 6054 5693 9 740 1695 36 0 0 chrX 20357038 20357231 -146293065 - B2_Mm1a SINE B2 0 193 1 9 740 540 229 80 44 chrX 20357240 20357377 -146292919 - B1_Mur2 SINE Alu -6 143 2 9 740 223 151 130 19 chrX 20357391 20357445 -146292851 - B1F2 SINE Alu -75 74 15 9 740 291 282 28 0 chrX 20357548 20357619 -146292677 - ID4 SINE ID -5 78 6 9 740 315 0 0 0 chrX 20357623 20357658 -146292638 + (TC)n Simple_repeat Simple_repeat 1 35 0 9 740 270 0 0 0 chrX 20357688 20357718 -146292578 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 740 550 256 111 0 chrX 20357912 20358137 -146292159 + L1MA5 LINE L1 5808 6055 -245 9 740 391 222 0 24 chrX 20358157 20358240 -146292056 - ID4_ SINE ID 0 83 3 9 740 336 230 11 22 chrX 20358483 20358572 -146291724 - ID_B1 SINE B4 -3 221 134 9 740 326 236 160 0 chrX 20358572 20358588 -146291708 - B1F SINE Alu -4 144 23 9 740 349 256 56 0 chrX 20358820 20358910 -146291386 + MurSatRep1 Unknown Unknown 639 733 -1404 9 740 218 351 173 14 chrX 20359601 20359884 -146290412 - L2a LINE L2 -13 3413 3086 9 740 203 189 0 0 chrX 20359992 20360029 -146290267 + T-rich Low_complexity Low_complexity 1 37 0 9 740 991 47 0 0 chrX 20360258 20360387 -146289909 + B2_Mm2 SINE B2 1 129 -66 9 740 244 333 86 0 chrX 20360388 20360481 -146289815 - LTR50 LTR ERVL -335 460 360 9 740 1552 169 78 16 chrX 20360561 20360868 -146289428 + RMER13B LTR ERVK 335 660 -248 9 740 464 216 10 19 chrX 20360852 20360956 -146289340 + RMER13B LTR ERVK 806 908 0 9 740 467 198 0 0 chrX 20361185 20361276 -146289020 - B1_Mur1 SINE Alu 0 149 59 9 740 1337 7 0 0 chrX 20361414 20361568 -146288728 - L1Md_A LINE L1 0 6582 6429 9 740 3608 129 138 35 chrX 20362000 20362398 -146287898 - RMER19A LTR ERVK 0 737 265 9 740 495 0 0 0 chrX 20362398 20362453 -146287843 + (TG)n Simple_repeat Simple_repeat 2 56 0 9 740 3608 129 138 35 chrX 20362453 20362601 -146287695 - RMER19A LTR ERVK -473 264 115 9 740 1228 48 0 0 chrX 20362601 20362747 -146287549 - B1_Mus2 SINE Alu -1 146 1 9 740 3608 129 138 35 chrX 20362747 20362865 -146287431 - RMER19A LTR ERVK -623 114 4 9 740 897 61 126 30 chrX 20363173 20363308 -146286988 - B1_Mus1 SINE Alu 0 148 1 9 740 344 325 17 81 chrX 20363525 20363699 -146286597 - RSINE1 SINE B4 0 165 3 9 740 901 32 8 16 chrX 20363813 20363938 -146286358 + B1_Mm SINE Alu 24 147 0 9 740 327 104 0 0 chrX 20363938 20363986 -146286310 + (A)n Simple_repeat Simple_repeat 1 48 0 9 740 1139 116 37 0 chrX 20364065 20364254 -146286042 + RMER6A LTR ERVK 1 196 -560 9 740 1109 88 0 0 chrX 20364255 20364415 -146285881 + B2_Mm2 SINE B2 2 161 -34 9 740 234 0 0 0 chrX 20364417 20364443 -146285853 + (CAAT)n Simple_repeat Simple_repeat 2 27 0 9 740 2875 119 36 58 chrX 20364453 20364527 -146285769 + RMER6A LTR ERVK 181 238 -518 9 740 693 234 71 201 chrX 20364527 20364712 -146285584 + RLTR23 LTR ERV1 2 152 -278 9 740 1228 115 16 21 chrX 20364712 20364898 -146285398 + B2_Mm2 SINE B2 2 186 -9 9 740 1157 57 0 0 chrX 20364904 20365045 -146285251 + B1_Mm SINE Alu 1 141 -6 9 740 343 36 35 35 chrX 20365048 20365105 -146285191 + (TAAA)n Simple_repeat Simple_repeat 2 58 0 9 740 693 234 71 201 chrX 20365105 20365272 -146285024 + RLTR23 LTR ERV1 157 293 -137 9 740 1291 25 127 18 chrX 20365272 20365438 -146284858 + B2_Mm1a SINE B2 2 185 -8 9 740 693 234 71 201 chrX 20365438 20365566 -146284730 + RLTR23 LTR ERV1 294 428 -2 9 740 2875 119 36 58 chrX 20365566 20366079 -146284217 + RMER6A LTR ERVK 239 755 -1 9 740 383 241 0 0 chrX 20366638 20366717 -146283579 - ID4_ SINE ID 0 83 5 9 740 279 224 90 49 chrX 20367070 20367192 -146283104 - RLTR9E LTR ERVK -29 380 254 9 740 336 111 0 0 chrX 20367466 20367520 -146282776 + (TG)n Simple_repeat Simple_repeat 2 55 0 9 740 587 175 110 8 chrX 20367660 20367787 -146282509 - B1_Mur1 SINE Alu -7 142 3 9 740 1834 168 12 3 chrX 20367841 20368176 -146282120 + RLTR17 LTR ERVK 204 541 -151 9 740 980 128 345 66 chrX 20368322 20368618 -146281678 - RMER10B LTR ERVL 0 398 21 9 740 322 140 0 0 chrX 20368909 20368967 -146281329 + RLTR42-int LTR ERVK 2196 2246 -3276 9 740 712 253 32 80 chrX 20368979 20369031 -146281265 + MYSERV6-int LTR ERVK 7271 7322 -1637 9 740 955 139 0 0 chrX 20369031 20369168 -146281128 + B1_Mus1 SINE Alu 1 137 -11 9 740 207 0 0 0 chrX 20369168 20369191 -146281105 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 9 740 712 253 109 93 chrX 20369191 20369621 -146280675 + MYSERV6-int LTR ERVK 7323 7506 -1453 9 740 225 83 0 0 chrX 20369786 20369822 -146280474 + (A)n Simple_repeat Simple_repeat 1 36 0 9 740 1241 34 0 7 chrX 20370061 20370209 -146280087 + B1_Mus2 SINE Alu 1 147 0 9 740 894 155 0 0 chrX 20370267 20370409 -146279887 + B1_Mus1 SINE Alu 1 142 -6 9 740 291 38 57 0 chrX 20370409 20370462 -146279834 + (CAA)n Simple_repeat Simple_repeat 2 57 0 9 740 497 136 204 0 chrX 20370474 20370577 -146279719 + B2_Mm2 SINE B2 4 127 -68 9 740 281 170 31 165 chrX 20370631 20370758 -146279538 + RMER17C-int LTR ERVK 3524 3633 -2504 9 740 909 75 315 0 chrX 20370775 20370921 -146279375 - B2_Mm2 SINE B2 0 195 4 9 740 763 210 134 121 chrX 20370921 20371402 -146278894 + RMER17C-int LTR ERVK 2608 2836 -402 9 740 270 0 0 0 chrX 20371402 20371432 -146278864 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 9 740 763 253 112 102 chrX 20371432 20371736 -146278560 + RMER17C-int LTR ERVK 2837 3150 -88 9 740 724 189 134 21 chrX 20371788 20371982 -146278314 + RMER10B LTR ERVL 1 216 -182 9 740 663 48 0 0 chrX 20371989 20372072 -146278224 + (TTTCC)n Simple_repeat Simple_repeat 1 83 0 9 740 678 238 20 13 chrX 20372140 20372289 -146278007 - B3A SINE B2 -45 153 4 9 740 474 18 0 0 chrX 20372658 20372713 -146277583 + (TTCTC)n Simple_repeat Simple_repeat 1 55 0 9 740 648 0 0 0 chrX 20372714 20372786 -146277510 + (TTTC)n Simple_repeat Simple_repeat 2 73 0 9 740 275 311 0 0 chrX 20372787 20372848 -146277448 - ID4_ SINE ID -9 74 14 9 740 370 295 30 15 chrX 20372865 20372999 -146277297 - B1F SINE Alu -8 141 6 9 740 735 52 0 0 chrX 20372995 20373091 -146277205 + B1_Mus2 SINE Alu 20 115 -32 9 740 954 288 122 45 chrX 20373101 20373501 -146276795 + Lx8 LINE L1 6856 7286 -187 9 740 391 265 20 10 chrX 20373553 20373652 -146276644 - B4A SINE B4 -192 100 1 9 740 449 311 103 7 chrX 20373858 20373994 -146276302 + RSINE1 SINE B4 6 154 -11 9 740 544 222 59 0 chrX 20374035 20374170 -146276126 + B1F1 SINE Alu 1 143 -6 9 740 259 123 53 0 chrX 20374170 20374227 -146276069 + GA-rich Low_complexity Low_complexity 1 60 0 9 740 24 0 0 0 chrX 20374738 20374762 -146275534 + AT_rich Low_complexity Low_complexity 1 24 0 9 740 2658 112 26 90 chrX 20374763 20375265 -146275031 - Lx2 LINE L1 -2 6995 6526 9 740 1141 75 0 0 chrX 20376564 20376710 -146273586 + B1_Mm SINE Alu 2 147 0 9 740 180 0 0 0 chrX 20376768 20376788 -146273508 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 9 740 1178 62 7 0 chrX 20376794 20376939 -146273357 - B1_Mus1 SINE Alu -1 147 2 9 740 828 153 0 7 chrX 20376991 20377129 -146273167 - B1_Mus2 SINE Alu 0 147 11 9 740 384 263 0 81 chrX 20377037 20377161 -146273135 - MT2B LTR ERVL -344 257 144 9 740 244 203 51 0 chrX 20377168 20377227 -146273069 - L1M5 LINE L1 -3632 2514 2453 9 740 774 96 19 0 chrX 20377457 20377561 -146272735 - U6 snRNA snRNA 0 107 2 9 740 532 54 0 0 chrX 20378459 20378533 -146271763 + B1_Mus2 SINE Alu 71 144 -3 9 740 1166 85 43 48 chrX 20378608 20378794 -146271502 - B2_Mm2 SINE B2 -9 186 2 9 740 573 206 29 29 chrX 20378891 20379031 -146271265 + B1_Mur4 SINE Alu 11 150 0 9 740 206 0 69 0 chrX 20379190 20379219 -146271077 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 1 740 1187 62 0 0 chrX 20379228 20379373 -146270923 - B1_Mus1 SINE Alu -2 146 2 1 740 180 0 0 0 chrX 20379391 20379411 -146270885 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 740 1201 49 0 0 chrX 20379420 20379563 -146270733 - B1_Mus1 SINE Alu -2 146 4 1 740 302 26 0 0 chrX 20379564 20379603 -146270693 - B2_Mm2 SINE B2 -154 41 3 1 740 789 170 44 0 chrX 20379626 20379761 -146270535 - B1_Mur1 SINE Alu -5 144 4 1 740 248 174 22 0 chrX 20379780 20379826 -146270470 + MER92A LTR ERV1 287 333 -79 1 740 377 204 81 10 chrX 20379863 20379962 -146270334 + B1_Mur4 SINE Alu 45 150 0 1 740 797 250 58 14 chrX 20379978 20380185 -146270111 + B3 SINE B2 1 216 0 1 740 210 37 0 0 chrX 20380259 20380286 -146270010 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 740 683 160 0 0 chrX 20380367 20380473 -146269823 - B3 SINE B2 -86 130 25 1 740 261 311 39 0 chrX 20380495 20380598 -146269698 - MLT1D-int LTR MaLR -1191 180 74 1 740 827 174 0 14 chrX 20380724 20380864 -146269432 + B1_Mur1 SINE Alu 5 142 -7 1 740 579 328 138 49 chrX 20380978 20381347 -146268949 - MLT1D LTR MaLR -82 423 22 1 740 1189 68 0 0 chrX 20381418 20381565 -146268731 + B1_Mm SINE Alu 1 147 0 1 740 376 234 84 0 chrX 20381898 20382005 -146268291 + B1F SINE Alu 32 147 -2 1 740 328 96 343 19 chrX 20382061 20382166 -146268130 - B2_Mm2 SINE B2 -7 188 50 1 740 1135 118 53 0 chrX 20382208 20382378 -146267918 - B2_Mm1t SINE B2 -14 179 1 1 740 707 206 15 0 chrX 20382379 20382515 -146267781 - B1_Mus1 SINE Alu -10 138 1 1 740 726 165 0 0 chrX 20382515 20382627 -146267669 + B3 SINE B2 19 130 -86 1 740 340 200 0 0 chrX 20382673 20382733 -146267563 + ID4_ SINE ID 2 61 -22 1 740 337 301 152 23 chrX 20382733 20382850 -146267446 + ID_B1 SINE B4 2 201 -23 1 740 335 274 106 31 chrX 20382902 20383093 -146267203 + L1MEc LINE L1 1069 1291 -5124 1 740 1871 81 43 60 chrX 20383118 20383419 -146266877 - ORR1A2 LTR MaLR -8 319 24 1 740 472 263 8 8 chrX 20383617 20383736 -146266560 + B1_Mur1 SINE Alu 2 120 -29 1 740 722 272 121 117 chrX 20383752 20384340 -146265956 - RLTR18 LTR ERVK -2 614 25 1 740 822 143 21 14 chrX 20384411 20384553 -146265743 + B1_Mur2 SINE Alu 7 149 0 1 740 363 216 11 54 chrX 20384554 20384647 -146265649 + MER68-int LTR ERVL 388 476 -2514 1 740 441 0 0 0 chrX 20384663 20384712 -146265584 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 740 2730 266 111 65 chrX 20385039 20385557 -146264739 + MER68-int LTR ERVL 714 1245 -1745 1 740 1202 61 0 0 chrX 20385557 20385704 -146264592 + B1_Mus1 SINE Alu 2 148 0 1 740 2730 269 153 61 chrX 20385704 20386848 -146263448 + MER68-int LTR ERVL 1246 2505 -485 1 740 278 226 263 25 chrX 20386897 20387015 -146263281 + MER68-int LTR ERVL 2636 2781 -209 1 740 416 113 0 27 chrX 20387017 20387090 -146263206 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 1 740 1143 55 7 27 chrX 20387200 20387349 -146262947 - B1_Mm SINE Alu -1 146 1 1 740 1055 64 50 0 chrX 20387848 20387988 -146262308 + B1_Mm SINE Alu 1 147 0 1 740 425 185 49 0 chrX 20388025 20388106 -146262190 + MER68-int LTR ERVL 2888 2972 -18 1 740 295 298 6 48 chrX 20388111 20388216 -146262080 + PB1 SINE Alu 3 103 -46 1 740 235 368 57 0 chrX 20388316 20388422 -146261874 + MER68 LTR ERVL 126 237 -326 1 740 342 320 0 0 chrX 20388741 20388819 -146261477 + RSINE1 SINE B4 88 165 0 1 740 24 0 0 0 chrX 20388819 20388843 -146261453 + AT_rich Low_complexity Low_complexity 1 24 0 1 740 575 41 0 0 chrX 20389056 20389129 -146261167 + L1_Mus2 LINE L1 6494 6566 0 1 740 268 274 237 19 chrX 20389680 20389836 -146260460 - L1MB3 LINE L1 -9 6174 5985 1 740 558 276 64 37 chrX 20389986 20390204 -146260092 + ID_B1 SINE B4 1 224 0 1 740 1272 97 32 26 chrX 20390324 20390514 -146259782 - B2_Mm2 SINE B2 -4 191 1 1 740 343 234 238 6 chrX 20390537 20390709 -146259587 - L1ME2z LINE L1 -1 6443 6232 1 740 992 66 80 0 chrX 20390827 20390964 -146259332 - B1_Mus1 SINE Alu 0 148 1 1 740 404 204 218 8 chrX 20391330 20391482 -146258814 + B3A SINE B2 29 209 -7 1 740 905 243 59 10 chrX 20391497 20391701 -146258595 + B3 SINE B2 1 214 -2 1 740 1235 58 81 6 chrX 20391703 20391876 -146258420 - B2_Mm2 SINE B2 -9 186 1 1 740 33 0 0 0 chrX 20391876 20391909 -146258387 + AT_rich Low_complexity Low_complexity 1 33 0 1 740 802 177 0 14 chrX 20391910 20392053 -146258243 + B1_Mus2 SINE Alu 2 142 -5 1 740 27 0 0 0 chrX 20392066 20392093 -146258203 + AT_rich Low_complexity Low_complexity 1 27 0 1 740 1233 30 36 6 chrX 20392105 20392271 -146258025 + B2_Mm2 SINE B2 1 171 -24 1 740 929 40 0 8 chrX 20392278 20392404 -146257892 - B1_Mus2 SINE Alu 0 147 23 1 740 928 215 98 30 chrX 20392455 20392719 -146257577 - L1MB7 LINE L1 -191 5993 5712 1 740 909 139 0 7 chrX 20392728 20392873 -146257423 - B1_Mur4 SINE Alu 0 150 7 1 740 747 243 0 0 chrX 20392915 20393063 -146257233 + B3 SINE B2 1 148 -68 1 740 213 35 0 0 chrX 20393587 20393616 -146256680 + B3 SINE B2 2 30 -186 1 740 273 244 88 25 chrX 20393634 20393714 -146256582 + MT2B LTR ERVL 172 256 -345 1 740 487 192 20 0 chrX 20393659 20393758 -146256538 + B1_Mur2 SINE Alu 47 147 -2 1 740 236 213 21 0 chrX 20394967 20395014 -146255282 - Alu_5 SINE Alu -125 50 3 1 740 288 0 0 0 chrX 20395213 20395245 -146255051 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 740 1143 82 0 0 chrX 20395347 20395494 -146254802 - B1_Mus1 SINE Alu 0 148 2 1 740 190 0 0 62 chrX 20395834 20395866 -146254430 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 1 740 424 218 60 60 chrX 20395910 20396027 -146254269 - B1F SINE Alu -7 142 26 1 740 558 43 0 0 chrX 20397180 20397249 -146253047 + (CA)n Simple_repeat Simple_repeat 1 69 0 1 740 225 53 0 26 chrX 20398085 20398115 -146252181 + B1_Mur4 SINE Alu 108 137 -13 1 740 239 0 0 31 chrX 20398115 20398147 -146252149 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 1 740 552 68 0 0 chrX 20398281 20398354 -146251942 + (TCCC)n Simple_repeat Simple_repeat 2 74 0 1 740 641 246 152 0 chrX 20398898 20399069 -146251227 + B3 SINE B2 1 197 -19 1 740 1154 82 0 7 chrX 20399107 20399255 -146251041 - B1_Mm SINE Alu 0 147 1 1 740 1228 28 0 0 chrX 20399345 20399486 -146250810 + B1_Mus2 SINE Alu 1 141 -6 1 740 526 284 91 16 chrX 20399526 20399780 -146250516 + L1MD2 LINE L1 5551 5823 -536 1 740 389 229 66 139 chrX 20399783 20399920 -146250376 + ID_B1 SINE B4 85 211 -13 1 740 225 318 78 137 chrX 20399920 20399933 -146250363 + B1_Mur3 SINE Alu 4 144 -5 1 740 387 300 35 92 chrX 20399950 20399999 -146250297 + L1MD2 LINE L1 5825 5867 -492 1 740 4853 51 3 3 chrX 20399999 20400586 -146249710 - LTRIS_Mus LTR ERV1 0 587 1 1 740 387 300 35 92 chrX 20400586 20400628 -146249668 + L1MD2 LINE L1 5868 5906 -453 1 740 445 231 86 43 chrX 20400628 20400768 -146249528 + B1F SINE Alu 2 147 -2 1 740 387 300 35 92 chrX 20400768 20400779 -146249517 + L1MD2 LINE L1 5907 5914 -445 1 740 288 53 0 0 chrX 20400779 20400817 -146249479 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 1 740 677 80 250 0 chrX 20400817 20400929 -146249367 - B1_Mus1 SINE Alu -8 140 1 1 740 387 300 35 92 chrX 20400929 20401084 -146249212 + L1MD2 LINE L1 5915 6068 -291 1 740 261 242 100 10 chrX 20401105 20401205 -146249091 + L1MD2 LINE L1 6244 6352 -7 1 740 981 148 7 0 chrX 20401423 20401572 -146248724 - B1_Mur4 SINE Alu 0 150 1 1 740 1412 173 16 4 chrX 20401572 20401811 -146248485 - L1_Mur3 LINE L1 -82 5798 5556 1 740 243 0 0 0 chrX 20401840 20401867 -146248429 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1 740 1214 48 0 0 chrX 20401867 20402012 -146248284 - B1_Mus2 SINE Alu -2 145 1 1 740 2232 131 58 18 chrX 20402012 20402446 -146247850 + RMER4A LTR ERVK 16 466 0 1 740 1042 146 141 0 chrX 20402446 20402638 -146247658 - L1_Mur3 LINE L1 -321 5556 5338 1 740 253 143 0 87 chrX 20402639 20402685 -146247611 - PB1D9 SINE Alu -56 64 23 1 740 225 108 0 0 chrX 20402704 20402741 -146247555 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 740 600 271 0 0 chrX 20402794 20402927 -146247369 - B3A SINE B2 -65 133 1 1 740 323 136 17 0 chrX 20402948 20403007 -146247289 + C-rich Low_complexity Low_complexity 4 63 0 1 740 591 234 21 28 chrX 20403016 20403161 -146247135 - B1_Mur1 SINE Alu -5 144 1 1 740 474 124 22 11 chrX 20403316 20403406 -146246890 + RLTR11A2 LTR ERVK 437 527 0 1 740 808 173 32 26 chrX 20403406 20403560 -146246736 - B3 SINE B2 -60 156 2 1 740 545 269 62 0 chrX 20403600 20403730 -146246566 - ID_B1 SINE B4 -5 219 82 1 740 1374 78 5 81 chrX 20403952 20404131 -146246165 + B2_Mm1a SINE B2 1 171 -22 1 740 279 0 0 0 chrX 20404131 20404162 -146246134 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 740 1007 89 0 22 chrX 20404162 20404300 -146245996 - B1_Mus1 SINE Alu -9 139 5 1 740 1374 78 5 81 chrX 20404300 20404328 -146245968 + B2_Mm1a SINE B2 172 192 -1 1 740 1205 54 0 0 chrX 20404445 20404592 -146245704 + B1_Mus2 SINE Alu 1 147 0 1 740 24 0 0 0 chrX 20404799 20404823 -146245473 + AT_rich Low_complexity Low_complexity 1 24 0 1 740 304 247 0 100 chrX 20404981 20405071 -146245225 + PB1D10 SINE Alu 31 111 -6 1 740 413 248 181 30 chrX 20405700 20405833 -146244463 + RSINE1 SINE B4 12 164 -1 1 740 22 70 0 0 chrX 20405834 20405877 -146244419 + AT_rich Low_complexity Low_complexity 1 43 0 1 740 204 40 0 0 chrX 20406645 20406670 -146243626 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1 740 477 206 75 0 chrX 20406670 20406766 -146243530 - PB1D10 SINE Alu -12 105 2 1 740 189 0 0 0 chrX 20406772 20406793 -146243503 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 740 2905 68 0 0 chrX 20407169 20407539 -146242757 - L1Md_F2 LINE L1 -1 6581 6212 1 740 1109 49 0 60 chrX 20407563 20407714 -146242582 + B1_Mus1 SINE Alu 2 143 -5 1 740 223 266 31 15 chrX 20407775 20407840 -146242456 + PB1D10 SINE Alu 9 74 -43 1 740 5528 221 53 18 chrX 20408232 20408617 -146241679 - Lx7 LINE L1 -184 7276 6871 1 740 333 0 0 0 chrX 20408617 20408654 -146241642 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 740 24004 189 48 32 chrX 20408654 20410846 -146239450 - Lx7 LINE L1 -814 6882 4682 1 740 1662 27 0 0 chrX 20410846 20411030 -146239266 - B2_Mm1t SINE B2 -8 185 2 1 740 1069 71 43 0 chrX 20411032 20411172 -146239124 - B1_Mus2 SINE Alu 0 147 2 1 740 24004 154 30 41 chrX 20411172 20412917 -146237379 - Lx7 LINE L1 -1199 4681 2892 1 740 2045 71 74 0 chrX 20412917 20412933 -146237363 - Lx3_Mus LINE L1 -4 7005 6988 1 740 333 0 0 0 chrX 20412933 20412970 -146237326 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1 740 2045 71 74 0 chrX 20412970 20413236 -146237060 - Lx3_Mus LINE L1 -22 6987 6703 1 740 24004 154 30 41 chrX 20413236 20413381 -146236915 - Lx7 LINE L1 -2989 2891 2797 1 740 1704 26 0 0 chrX 20413381 20413573 -146236723 - B2_Mm1a SINE B2 0 193 2 1 740 24004 154 30 41 chrX 20413573 20414289 -146236007 - Lx7 LINE L1 -3084 2796 2084 1 740 207 0 0 0 chrX 20414289 20414312 -146235984 + (TGG)n Simple_repeat Simple_repeat 1 23 0 1 740 24004 154 30 41 chrX 20414312 20414339 -146235957 - Lx7 LINE L1 -3797 2083 2059 1 740 297 0 0 0 chrX 20414339 20414372 -146235924 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 740 387 0 0 0 chrX 20414372 20414414 -146235882 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 740 24004 154 30 41 chrX 20414414 20414839 -146235457 - Lx7 LINE L1 -3822 2058 1614 1 740 3370 130 17 9 chrX 20414839 20415373 -146234923 - Lx2A1 LINE L1 -1 7007 6470 1 740 24004 223 56 30 chrX 20415373 20417307 -146232989 - Lx7 LINE L1 -4267 1613 17 1 740 957 231 10 5 chrX 20417458 20417658 -146232638 + B3 SINE B2 2 202 -14 1 740 180 77 0 0 chrX 20417658 20417684 -146232612 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 1 740 273 29 0 0 chrX 20417731 20417765 -146232531 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 740 603 40 0 0 chrX 20417837 20417911 -146232385 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 1 740 3129 62 5 8 chrX 20417912 20418305 -146231991 - MTA_Mm LTR MaLR -4 392 1 1 740 226 233 0 0 chrX 20418305 20418348 -146231948 + (CCTA)n Simple_repeat Simple_repeat 1 43 0 1 740 289 256 22 11 chrX 20418353 20418444 -146231852 + CT-rich Low_complexity Low_complexity 3 94 0 1 740 280 269 39 0 chrX 20418461 20418539 -146231757 - B1F2 SINE Alu -33 116 36 1 740 463 141 0 0 chrX 20418786 20418892 -146231404 - L1Md_F3 LINE L1 0 6584 6500 1 740 201 94 0 0 chrX 20419954 20419986 -146230310 + (T)n Simple_repeat Simple_repeat 1 32 0 1 740 1189 41 7 0 chrX 20419999 20420144 -146230152 - B1_Mus2 SINE Alu 0 147 2 1 740 401 316 59 23 chrX 20420146 20420366 -146229930 - LTR82A LTR ERVL -557 315 88 1 740 276 371 43 11 chrX 20420613 20420801 -146229495 + LTR16A LTR ERVL 256 449 -2 1 740 301 276 53 0 chrX 20420852 20420928 -146229368 + PB1D10 SINE Alu 1 80 -37 1 740 509 230 0 0 chrX 20421003 20421103 -146229193 - B1_Mur1 SINE Alu -6 143 44 1 740 678 252 50 37 chrX 20421189 20421351 -146228945 + ID_B1 SINE B4 2 169 -55 1 740 2303 123 56 0 chrX 20421351 20421708 -146228588 - RLTR14 LTR ERV1 -3 379 3 1 740 678 252 50 37 chrX 20421708 20421763 -146228533 + ID_B1 SINE B4 170 221 -3 1 740 1093 83 7 0 chrX 20421861 20422005 -146228291 + B1_Mus2 SINE Alu 1 145 -2 1 740 342 0 0 0 chrX 20422005 20422043 -146228253 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 1 740 21 57 0 0 chrX 20422166 20422201 -146228095 + AT_rich Low_complexity Low_complexity 1 35 0 1 740 614 245 105 22 chrX 20422257 20422430 -146227866 + B3A SINE B2 1 176 -19 1 740 757 278 113 4 chrX 20422486 20422742 -146227554 + B4A SINE B4 1 284 -8 1 740 1454 64 18 27 chrX 20422742 20422967 -146227329 + Lx3_Mus LINE L1 6787 7009 0 1 740 560 297 13 33 chrX 20423256 20423406 -146226890 - RSINE1 SINE B4 -13 152 6 1 740 612 247 161 25 chrX 20423412 20423611 -146226685 - B4A SINE B4 -62 230 5 1 740 428 267 87 116 chrX 20423803 20424138 -146226158 - L1ME2z LINE L1 -453 5991 5667 1 740 603 264 72 0 chrX 20424152 20424319 -146225977 + MER63A DNA AcHobo 29 207 -3 1 740 285 228 0 0 chrX 20424319 20424376 -146225920 - L1ME2z LINE L1 -767 5677 5621 1 740 1165 219 120 19 chrX 20424416 20424775 -146225521 - MER67C LTR ERV1 -144 567 173 1 740 267 31 0 0 chrX 20424878 20424910 -146225386 + (TCTA)n Simple_repeat Simple_repeat 2 33 0 1 740 242 29 0 28 chrX 20427785 20427821 -146222475 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 740 1233 48 0 0 chrX 20427823 20427970 -146222326 - B1_Mm SINE Alu 0 147 1 1 740 297 168 48 0 chrX 20428157 20428229 -146222067 + MIRc SINE MIR 90 164 -98 1 740 983 204 45 15 chrX 20428255 20428454 -146221842 - B3 SINE B2 -10 206 2 1 740 283 359 72 0 chrX 20429291 20429458 -146220838 + MIR SINE MIR 82 260 -2 1 740 548 147 19 19 chrX 20429732 20429836 -146220460 + ID_B1 SINE B4 121 224 0 1 740 27 29 0 0 chrX 20429946 20429980 -146220316 + AT_rich Low_complexity Low_complexity 1 34 0 1 740 348 334 183 33 chrX 20430017 20430323 -146219973 + L2a LINE L2 3073 3424 -2 1 740 589 230 23 38 chrX 20432110 20432241 -146218055 + RSINE1 SINE B4 33 161 -4 1 740 880 226 63 41 chrX 20432272 20432493 -146217803 + B4A SINE B4 4 229 -63 1 740 1248 48 0 0 chrX 20432493 20432640 -146217656 + B1_Mus2 SINE Alu 1 147 0 1 740 297 0 0 0 chrX 20432640 20432673 -146217623 + (A)n Simple_repeat Simple_repeat 1 33 0 1 740 242 299 0 69 chrX 20432680 20432752 -146217544 + B4A SINE B4 224 290 -2 1 740 335 167 0 0 chrX 20432774 20432828 -146217468 + B4A SINE B4 218 271 -21 1 740 201 74 0 0 chrX 20432906 20432933 -146217363 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 740 365 267 2 15 chrX 20432995 20433091 -146217205 + PB1D10 SINE Alu 2 77 -40 1 740 837 259 35 112 chrX 20433089 20433376 -146216920 + B4 SINE B4 25 289 -3 1 740 364 214 110 20 chrX 20433474 20433574 -146216722 + PB1D10 SINE Alu 9 117 0 1 740 1201 48 0 7 chrX 20433578 20433724 -146216572 + B1_Mus2 SINE Alu 1 145 -2 1 740 528 285 28 0 chrX 20434373 20434517 -146215779 + B1F SINE Alu 2 149 0 1 740 259 250 31 15 chrX 20441085 20441150 -146209146 + MER58B DNA MER1_type 26 91 -250 1 740 283 260 0 14 chrX 20441205 20441279 -146209017 - B1F1 SINE Alu -64 85 13 1 740 275 263 108 103 chrX 20441366 20441561 -146208735 + MER58B DNA MER1_type 119 314 -27 1 740 373 228 25 0 chrX 20442571 20442650 -146207646 - ID4 SINE ID -1 82 2 1 740 227 242 0 16 chrX 20442651 20442714 -146207582 + L1MB8 LINE L1 6112 6173 -5 1 740 1006 80 185 7 chrX 20443317 20443468 -146206828 - B2_Mm2 SINE B2 -15 180 3 1 740 1510 53 5 11 chrX 20443770 20443960 -146206336 - B2_Mm1a SINE B2 -4 189 1 1 740 212 323 71 53 chrX 20445572 20445742 -146204554 + MIR SINE MIR 90 262 0 1 740 559 272 22 22 chrX 20445826 20445965 -146204331 + RSINE1 SINE B4 3 141 -24 1 740 579 15 0 0 chrX 20445965 20446033 -146204263 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 740 180 77 0 0 chrX 20446236 20446262 -146204034 + (TCTCTG)n Simple_repeat Simple_repeat 5 30 0 1 740 375 191 45 9 chrX 20446262 20446371 -146203925 - B1_Mur2 SINE Alu -15 134 10 1 741 23 0 0 0 chrX 20448516 20448539 -146201757 + AT_rich Low_complexity Low_complexity 1 23 0 1 741 1052 265 110 39 chrX 20448580 20448803 -146201493 - MER31A LTR ERV1 -18 467 232 1 741 894 191 36 26 chrX 20448803 20448996 -146201300 - B3A SINE B2 -1 197 3 1 741 1052 265 110 39 chrX 20448996 20449008 -146201288 - MER31A LTR ERV1 -254 231 224 1 741 593 217 17 0 chrX 20449008 20449123 -146201173 - PB1D10 SINE Alu 0 117 1 1 741 1052 265 110 39 chrX 20449123 20449322 -146200974 - MER31A LTR ERV1 -262 223 1 1 741 221 261 150 11 chrX 20449380 20449462 -146200834 - ID4_ SINE ID -63 89 2 1 741 444 269 50 0 chrX 20449477 20449596 -146200700 - PB1 SINE Alu -2 125 1 1 741 454 215 98 8 chrX 20449607 20449729 -146200567 + L2a LINE L2 3288 3420 -6 1 741 1441 57 17 6 chrX 20451066 20451244 -146199052 - B2_Mm2 SINE B2 -14 181 2 1 741 355 282 0 0 chrX 20451964 20452035 -146198261 + ID4_ SINE ID 1 71 -12 1 741 371 82 0 116 chrX 20452079 20452148 -146198148 + B1_Mur3 SINE Alu 74 134 -15 1 741 396 0 0 0 chrX 20452153 20452197 -146198099 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1 741 261 286 0 0 chrX 20452604 20452660 -146197636 - B4A SINE B4 -235 57 2 1 741 314 256 3 38 chrX 20452676 20452766 -146197530 - B1F2 SINE Alu -51 99 10 1 741 258 277 15 56 chrX 20453210 20453304 -146196992 - ID4_ SINE ID 0 83 1 1 741 302 306 35 41 chrX 20453597 20453752 -146196544 + ID_B1 SINE B4 27 170 -54 1 741 423 235 16 13 chrX 20453670 20453770 -146196526 + PB1D10 SINE Alu 7 107 -10 1 741 207 0 0 0 chrX 20453770 20453793 -146196503 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 741 195 42 0 0 chrX 20453815 20453839 -146196457 + (GA)n Simple_repeat Simple_repeat 1 24 0 1 741 555 256 32 0 chrX 20454074 20454199 -146196097 - B1F SINE Alu -13 136 8 1 741 3232 82 69 4 chrX 20454232 20454268 -146196028 - L1_Mus3 LINE L1 0 6638 6624 1 741 1055 66 73 0 chrX 20454268 20454405 -146195891 - B1_Mm SINE Alu 0 147 1 1 741 3232 82 69 4 chrX 20454405 20454855 -146195441 - L1_Mus3 LINE L1 -15 6623 6143 1 741 493 286 71 0 chrX 20456554 20456694 -146193602 - B3 SINE B2 -27 189 40 1 741 28 48 0 0 chrX 20456784 20456826 -146193470 + AT_rich Low_complexity Low_complexity 1 42 0 1 741 328 349 95 21 chrX 20456828 20457044 -146193252 + MIR SINE MIR 13 234 -28 1 741 690 13 0 0 chrX 20457319 20457398 -146192898 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 1 741 1174 57 0 0 chrX 20457400 20457541 -146192755 - B1_Mus2 SINE Alu -6 141 1 1 741 305 243 14 0 chrX 20458392 20458462 -146191834 - ID4_ SINE ID -11 72 2 1 741 1175 55 7 0 chrX 20458549 20458695 -146191601 + B1_Mus1 SINE Alu 2 148 0 1 741 750 126 164 8 chrX 20458740 20458868 -146191428 - Lx4B LINE L1 -60 6998 6851 1 741 751 83 9 9 chrX 20458868 20458977 -146191319 + Lx4A LINE L1 5698 5806 -1252 1 741 440 207 35 18 chrX 20459063 20459176 -146191120 - PB1D10 SINE Alu 0 117 3 1 741 936 280 7 32 chrX 20459213 20459497 -146190799 + B4A SINE B4 2 278 -14 1 741 485 226 155 58 chrX 20459629 20459803 -146190493 + B3A SINE B2 1 191 -7 1 741 949 63 13 95 chrX 20459838 20459996 -146190300 + B1_Mus1 SINE Alu 4 148 0 1 741 263 233 4 4 chrX 20460008 20460083 -146190213 + B1F SINE Alu 43 149 0 1 741 263 250 53 40 chrX 20460092 20460167 -146190129 + ID4 SINE ID 8 83 0 1 741 206 291 0 0 chrX 20460167 20460222 -146190074 + GA-rich Low_complexity Low_complexity 1 55 0 1 741 463 226 0 0 chrX 20461256 20461349 -146188947 + PB1D9 SINE Alu 23 115 -5 1 741 369 295 0 0 chrX 20462162 20462257 -146188039 + ID_B1 SINE B4 84 178 -46 1 741 683 254 0 0 chrX 20462277 20462419 -146187877 - B1_Mur2 SINE Alu -7 142 1 1 741 296 196 0 0 chrX 20462419 20462475 -146187821 + ID_B1 SINE B4 167 222 -2 1 741 229 272 75 28 chrX 20462684 20462790 -146187506 + ORR1E LTR MaLR 26 136 -223 1 741 1108 75 14 0 chrX 20463151 20463297 -146186999 - B1_Mus1 SINE Alu 0 148 1 1 741 3967 68 55 2 chrX 20463300 20463397 -146186899 - L1_Mus3 LINE L1 -6 6632 6536 1 741 189 74 0 0 chrX 20463397 20463424 -146186872 + (CCCA)n Simple_repeat Simple_repeat 3 29 0 1 741 3967 68 55 2 chrX 20463424 20463853 -146186443 - L1_Mus3 LINE L1 -103 6535 6079 1 741 305 290 91 25 chrX 20464096 20464294 -146186002 - L1M5 LINE L1 -1726 4420 4210 1 741 216 67 0 0 chrX 20464328 20464358 -146185938 + (TTG)n Simple_repeat Simple_repeat 2 31 0 1 741 1003 53 0 0 chrX 20464358 20464491 -146185805 - B1_Mus1 SINE Alu -10 138 6 1 741 689 224 107 25 chrX 20464491 20464555 -146185741 - ID_B1 SINE B4 -10 214 2 1 741 227 303 0 0 chrX 20464654 20464720 -146185576 - L1M3 LINE L1 -2034 4106 4041 1 741 393 247 11 0 chrX 20464973 20465066 -146185230 - B1F SINE Alu 0 149 56 1 741 369 0 0 0 chrX 20465096 20465137 -146185159 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1 741 33 56 0 0 chrX 20465244 20465298 -146184998 + AT_rich Low_complexity Low_complexity 1 54 0 1 741 7069 63 13 5 chrX 20465472 20466419 -146183877 - L1_Mur1 LINE L1 -1463 4423 3470 1 741 234 152 0 0 chrX 20466420 20466479 -146183817 + T-rich Low_complexity Low_complexity 1 59 0 1 741 1142 75 0 0 chrX 20466485 20466632 -146183664 - B1_Mus2 SINE Alu 0 147 1 1 741 7388 133 0 74 chrX 20466636 20467417 -146182879 + Lx3_Mus LINE L1 4646 5406 -471 1 741 1072 82 0 14 chrX 20467417 20467565 -146182731 + B1_Mus1 SINE Alu 2 147 -1 1 741 7500 101 11 58 chrX 20467565 20468016 -146182280 + Lx3_Mus LINE L1 5407 5797 -1212 1 741 1600 37 11 0 chrX 20468016 20468207 -146182089 + B2_Mm1a SINE B2 1 193 0 1 741 7500 65 24 39 chrX 20468207 20469040 -146181256 + Lx3_Mus LINE L1 5798 6616 -393 1 741 229 182 23 0 chrX 20469059 20469103 -146181193 + ID_B1 SINE B4 133 177 -47 1 741 24 32 0 0 chrX 20469254 20469285 -146181011 + AT_rich Low_complexity Low_complexity 1 31 0 1 741 406 187 47 39 chrX 20469350 20469478 -146180818 + Lx6 LINE L1 7308 7436 -24 1 741 348 235 153 0 chrX 20469583 20469668 -146180628 + L1M4c LINE L1 691 788 -5754 1 741 455 293 0 25 chrX 20469708 20469827 -146180469 + PB1D10 SINE Alu 1 116 -1 1 741 969 173 50 65 chrX 20469857 20470117 -146180179 + Lx3C LINE L1 6717 6972 -4 1 741 589 256 112 0 chrX 20470139 20470354 -146179942 + L1M4c LINE L1 873 1111 -5431 1 741 351 0 0 0 chrX 20470451 20470490 -146179806 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 1 741 474 286 50 0 chrX 20470735 20470875 -146179421 + RodERV21-int LTR ERV1 58 204 -4787 1 741 737 249 80 22 chrX 20471102 20471328 -146178968 + RodERV21-int LTR ERV1 729 967 -4024 1 741 459 0 0 0 chrX 20471353 20471404 -146178892 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 741 25 31 0 0 chrX 20471924 20471956 -146178340 + AT_rich Low_complexity Low_complexity 1 32 0 1 741 389 290 128 54 chrX 20472330 20472534 -146177762 + RLTR42-int LTR ERVK 1570 1788 -3734 1 741 399 200 24 55 chrX 20472587 20472714 -146177582 + MYSERV-int LTR ERVK 5353 5475 -1075 1 741 374 77 0 0 chrX 20472883 20472935 -146177361 - B1_Mus2 SINE Alu -5 142 91 1 741 596 224 151 11 chrX 20472935 20473120 -146177176 + L1M4c LINE L1 1683 1893 -4753 1 741 1125 224 117 35 chrX 20473132 20473474 -146176822 + MTE2a LTR MaLR 10 379 0 1 741 1501 49 16 0 chrX 20473476 20473661 -146176635 + B2_Mm2 SINE B2 1 188 -7 1 741 227 240 104 0 chrX 20473670 20473766 -146176530 + L1M4c LINE L1 2006 2111 -4614 1 741 258 32 0 0 chrX 20473864 20473895 -146176401 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 741 428 0 19 0 chrX 20473895 20473946 -146176350 + (TTTA)n Simple_repeat Simple_repeat 1 53 0 1 741 2612 152 29 40 chrX 20474190 20474647 -146175649 - RMER6A LTR ERVK 0 756 314 1 741 4363 87 2 7 chrX 20474647 20475236 -146175060 - L1_Mus2 LINE L1 -1 6565 5980 1 741 2612 152 29 40 chrX 20475236 20475256 -146175040 - RMER6A LTR ERVK -443 313 294 1 741 342 0 0 0 chrX 20475256 20475294 -146175002 + (TC)n Simple_repeat Simple_repeat 2 39 0 1 741 2612 152 29 40 chrX 20475294 20475362 -146174934 - RMER6A LTR ERVK -463 293 217 1 741 892 130 15 0 chrX 20475493 20475624 -146174672 + B1_Mur2 SINE Alu 2 134 -15 1 741 467 246 102 0 chrX 20475630 20475748 -146174548 + B1F SINE Alu 20 149 0 1 741 275 214 71 0 chrX 20475763 20475833 -146174463 + L1M4c LINE L1 2608 2682 -3962 1 741 402 178 96 0 chrX 20475836 20475909 -146174387 + B3A SINE B2 1 80 -118 1 741 22 0 0 0 chrX 20475944 20475966 -146174330 + AT_rich Low_complexity Low_complexity 1 22 0 1 741 329 148 16 0 chrX 20475977 20476039 -146174257 + L1M4c LINE L1 2688 2752 -3988 1 741 31 0 0 0 chrX 20476039 20476070 -146174226 + AT_rich Low_complexity Low_complexity 1 31 0 1 741 593 193 102 15 chrX 20476089 20476226 -146174070 - B1_Mur2 SINE Alu 0 149 1 1 741 213 39 0 0 chrX 20476239 20476265 -146174031 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1 741 225 0 0 0 chrX 20476281 20476306 -146173990 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 741 563 280 42 7 chrX 20476332 20476476 -146173820 - RSINE1 SINE B4 -14 151 3 1 741 779 197 81 12 chrX 20476476 20476723 -146173573 + L1M4 LINE L1 2234 2497 -3649 1 741 438 182 0 0 chrX 20476733 20476810 -146173486 + RLTR23 LTR ERV1 8 84 -346 1 741 418 237 78 90 chrX 20476925 20477092 -146173204 + RLTR23 LTR ERV1 266 430 0 1 741 511 204 52 26 chrX 20477359 20477475 -146172821 - PB1D9 SINE Alu -1 119 1 1 741 521 269 151 8 chrX 20477551 20477735 -146172561 + B3A SINE B2 2 209 -7 1 741 819 192 27 0 chrX 20477735 20477881 -146172415 + B1_Mur4 SINE Alu 1 150 0 1 741 378 278 143 46 chrX 20477881 20477892 -146172404 + B3 SINE B2 210 216 0 1 741 417 232 118 38 chrX 20477917 20478268 -146172028 + L1M4 LINE L1 3048 3436 -2710 1 741 1195 68 0 0 chrX 20478268 20478416 -146171880 + B1_Mus1 SINE Alu 1 148 0 1 741 417 250 147 20 chrX 20478416 20478432 -146171864 + L1M4 LINE L1 3437 3452 -2694 1 741 229 129 111 16 chrX 20478437 20478500 -146171796 + L1M4 LINE L1 3427 3495 -2651 1 741 511 268 45 0 chrX 20478527 20478639 -146171657 + B1F SINE Alu 1 117 -32 1 741 498 33 0 0 chrX 20478653 20478713 -146171583 + (TTTTC)n Simple_repeat Simple_repeat 5 64 0 1 741 878 46 19 0 chrX 20478714 20478848 -146171448 - B1_Mus1 SINE Alu -2 148 2 1 741 422 188 8 97 chrX 20478737 20478861 -146171435 - MT2B LTR ERVL -337 264 152 1 741 495 276 214 21 chrX 20478890 20478947 -146171349 - L1_Mur3 LINE L1 -465 5415 5355 1 741 3338 38 128 0 chrX 20478947 20479368 -146170928 + IAPLTR2_Mm LTR ERVK 1 475 0 1 741 495 276 214 21 chrX 20479368 20479684 -146170612 - L1_Mur3 LINE L1 -526 5354 4970 1 741 631 258 109 2 chrX 20479683 20479981 -146170315 + L1MA4 LINE L1 5557 5932 -1712 1 741 1676 27 0 0 chrX 20480019 20480206 -146170090 + B2_Mm1a SINE B2 1 187 -6 1 741 1006 241 105 88 chrX 20480358 20480826 -146169470 + L1M4 LINE L1 3512 3987 -2159 1 741 492 357 4 16 chrX 20480837 20481082 -146169214 - MIR SINE MIR -19 243 2 1 741 759 189 20 40 chrX 20481166 20481315 -146168981 + B1_Mur3 SINE Alu 3 148 -1 1 741 298 274 90 74 chrX 20481895 20481936 -146168360 - ID_B1 SINE B4 -19 205 167 1 741 1186 68 0 0 chrX 20481936 20482082 -146168214 + B1_Mus1 SINE Alu 1 146 -2 1 741 298 274 90 74 chrX 20482082 20482162 -146168134 - ID_B1 SINE B4 -58 166 82 1 741 28 71 0 0 chrX 20482267 20482323 -146167973 + AT_rich Low_complexity Low_complexity 1 56 0 1 741 763 83 0 0 chrX 20482510 20482618 -146167678 + B1_Mus2 SINE Alu 40 147 0 1 741 219 74 36 36 chrX 20482625 20482681 -146167615 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 1 741 1235 48 0 0 chrX 20482934 20483081 -146167215 + B1_Mus1 SINE Alu 2 148 0 1 741 3233 58 13 0 chrX 20483124 20483519 -146166777 + MTB LTR MaLR 1 400 0 1 741 871 200 66 61 chrX 20483561 20483774 -146166522 + B3 SINE B2 3 216 0 1 741 961 121 96 0 chrX 20483930 20484096 -146166200 - URR1A DNA MER1_type -1 225 44 1 741 1328 67 0 6 chrX 20484512 20484693 -146165603 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 1 741 196 157 19 38 chrX 20484693 20484746 -146165550 + CT-rich Low_complexity Low_complexity 3 54 0 1 741 244 309 84 44 chrX 20485575 20485778 -146164518 + L2a LINE L2 3031 3241 -185 1 741 450 0 0 0 chrX 20485792 20485842 -146164454 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 741 649 142 96 59 chrX 20485844 20485979 -146164317 - B2_Mm2 SINE B2 -55 140 1 1 741 766 83 0 0 chrX 20485987 20486095 -146164201 - B1_Mur4 SINE Alu -2 148 41 1 741 316 210 14 108 chrX 20486016 20486155 -146164141 - RLTR25B LTR ERVK -516 512 387 1 741 257 308 0 13 chrX 20486165 20486244 -146164052 + L2a LINE L2 3338 3415 -11 1 741 194 333 28 0 chrX 20486238 20486310 -146163986 + L2b LINE L2 3300 3373 -2 1 741 464 112 22 0 chrX 20487710 20487799 -146162497 + (TCTCTG)n Simple_repeat Simple_repeat 2 92 0 1 741 389 212 0 12 chrX 20487908 20487994 -146162302 + MTC LTR MaLR 1 85 -336 1 741 337 148 19 0 chrX 20488129 20488183 -146162113 + CT-rich Low_complexity Low_complexity 6 60 0 1 741 417 89 0 48 chrX 20488183 20488266 -146162030 + (TTCCC)n Simple_repeat Simple_repeat 3 81 0 1 741 771 169 15 0 chrX 20488278 20488408 -146161888 - B1_Mur1 SINE Alu -13 136 5 1 741 872 141 184 6 chrX 20488471 20488650 -146161646 + MTC LTR MaLR 1 211 -210 1 741 1021 214 18 31 chrX 20488997 20489100 -146161196 + MTC LTR MaLR 196 299 -122 1 741 1226 109 0 40 chrX 20489100 20489301 -146160995 - B2_Mm1a SINE B2 0 193 1 1 741 1021 214 18 31 chrX 20489301 20489424 -146160872 + MTC LTR MaLR 300 419 -2 1 741 370 276 11 0 chrX 20489424 20489510 -146160786 + LTR16A LTR ERVL 209 295 -156 1 741 287 338 0 0 chrX 20490686 20490760 -146159536 + ID4 SINE ID 2 75 -8 1 741 842 348 73 27 chrX 20490782 20491329 -146158967 + HERV16-int LTR ERVL 2253 2824 -2172 1 741 473 244 26 17 chrX 20491332 20491449 -146158847 + B1F SINE Alu 32 149 0 1 741 817 337 70 48 chrX 20491462 20491918 -146158378 + HERV16-int LTR ERVL 2745 3210 -2457 1 741 507 239 18 9 chrX 20491918 20492032 -146158264 - PB1D10 SINE Alu -2 115 1 1 741 817 337 70 48 chrX 20492032 20492176 -146158120 + HERV16-int LTR ERVL 3211 3357 -2310 1 741 536 347 31 25 chrX 20492181 20492506 -146157790 + HERV16-int LTR ERVL 3772 4098 -1569 1 741 389 276 41 0 chrX 20492513 20492611 -146157685 + HERV16-int LTR ERVL 4219 4320 -1165 1 741 740 294 34 8 chrX 20492978 20493215 -146157081 + HERV16-int LTR ERVL 4646 4888 -779 1 741 284 212 45 34 chrX 20493390 20493483 -146156813 + HERV16-int LTR ERVL 5178 5359 -402 1 741 228 259 35 69 chrX 20493702 20493742 -146156554 - MER112 DNA MER1_type -68 193 154 1 741 487 275 9 0 chrX 20493742 20493851 -146156445 + PB1D10 SINE Alu 1 110 -7 1 741 228 259 35 69 chrX 20493851 20493926 -146156370 - MER112 DNA MER1_type -108 153 82 1 741 24 53 0 0 chrX 20494003 20494041 -146156255 + AT_rich Low_complexity Low_complexity 1 38 0 1 741 189 0 0 0 chrX 20494189 20494210 -146156086 + (A)n Simple_repeat Simple_repeat 1 21 0 1 741 289 277 39 12 chrX 20494216 20494307 -146155989 + B1F2 SINE Alu 15 108 -9 1 741 1356 93 16 0 chrX 20495154 20495336 -146154960 + B2_Mm2 SINE B2 2 186 -9 1 741 23 33 0 0 chrX 20497576 20497606 -146152690 + GC_rich Low_complexity Low_complexity 1 30 0 1 741 1856 169 76 38 chrX 20499163 20499320 -146150976 + ORR1C2 LTR MaLR 3 171 -213 1 741 270 0 0 0 chrX 20499320 20499350 -146150946 + (CAGC)n Simple_repeat Simple_repeat 2 31 0 1 741 309 26 0 0 chrX 20499350 20499387 -146150909 + (TCTG)n Simple_repeat Simple_repeat 4 41 0 1 741 1856 169 76 38 chrX 20499387 20499596 -146150700 + ORR1C2 LTR MaLR 172 383 -1 1 741 1450 83 16 10 chrX 20500472 20500666 -146149630 - B2_Mm2 SINE B2 0 195 1 1 741 339 285 86 14 chrX 20501619 20501758 -146148538 + MIR SINE MIR 112 260 -2 2 741 266 262 33 0 chrX 20502972 20503033 -146147263 - B1F1 SINE Alu -74 75 13 3 741 435 333 34 0 chrX 20502983 20503100 -146147196 - ID_B1 SINE B4 -81 143 23 4 741 372 305 8 17 chrX 20503164 20503284 -146147012 - ID_B1 SINE B4 -21 203 85 5 741 227 204 0 69 chrX 20503365 20503423 -146146873 + MIR SINE MIR 110 163 -99 6 741 2832 66 24 0 chrX 20505999 20506376 -146143920 + L1_Mus3 LINE L1 6246 6631 -7 7 741 1148 259 22 26 chrX 20507745 20508018 -146142278 - Lx6 LINE L1 -10 7450 7179 8 741 281 286 86 43 chrX 20508033 20508172 -146142124 + MER20 DNA MER1_type 75 219 0 9 741 194 200 39 20 chrX 20508905 20508956 -146141340 + MIRc SINE MIR 81 132 -136 1 741 249 247 110 0 chrX 20508965 20509038 -146141258 - B1_Mur2 SINE Alu 0 149 69 1 741 271 319 72 29 chrX 20509493 20509632 -146140664 - L2a LINE L2 0 3426 3282 1 741 290 289 46 37 chrX 20509680 20509788 -146140508 - MER5A DNA MER1_type -7 182 74 1 741 223 91 0 0 chrX 20509976 20510009 -146140287 - B2_Mm2 SINE B2 -99 96 64 1 741 1074 104 24 0 chrX 20510068 20510232 -146140064 - B2_Mm2 SINE B2 -26 169 2 1 741 414 0 0 0 chrX 20510297 20510343 -146139953 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 741 947 142 14 0 chrX 20510508 20510656 -146139640 - B1_Mur4 SINE Alu 0 150 1 1 741 562 288 79 6 chrX 20510849 20511027 -146139269 + B4 SINE B4 59 249 -43 1 741 231 298 84 11 chrX 20513905 20514000 -146136296 + MER5A DNA MER1_type 85 186 -3 1 741 613 257 26 19 chrX 20515204 20515359 -146134937 - RSINE1 SINE B4 -6 159 4 2 741 1316 204 153 72 chrX 20515412 20515798 -146134498 + MTD LTR MaLR 3 419 0 2 741 3699 228 73 58 chrX 20515798 20517004 -146133292 + MTD-int LTR MaLR 1 1224 -34 2 741 1929 190 47 12 chrX 20517027 20517432 -146132864 + MTD LTR MaLR 1 419 0 2 741 347 240 40 40 chrX 20518100 20518200 -146132096 + PB1D7 SINE Alu 21 120 0 2 741 477 235 58 8 chrX 20518495 20518615 -146131681 + B1F SINE Alu 24 149 0 2 741 764 264 11 11 chrX 20519092 20519272 -146131024 - B3A SINE B2 -16 182 3 2 741 634 329 177 23 chrX 20519302 20519732 -146130564 + MLT1E2 LTR MaLR 4 499 -128 2 741 511 166 89 20 chrX 20519764 20519866 -146130430 - PB1D10 SINE Alu -3 114 6 2 741 189 0 0 0 chrX 20519951 20519972 -146130324 + (TC)n Simple_repeat Simple_repeat 1 21 0 2 741 1010 71 0 7 chrX 20520318 20520459 -146129837 - B1_Mus1 SINE Alu 0 148 9 2 741 253 254 15 0 chrX 20520579 20520646 -146129650 - RMER15 LTR ERVL -105 470 403 3 741 333 0 0 0 chrX 20520718 20520755 -146129541 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 741 297 309 37 0 chrX 20520777 20520858 -146129438 - PB1D10 SINE Alu -10 107 24 3 741 448 341 17 51 chrX 20520791 20520967 -146129329 - ID_B1 SINE B4 -53 171 2 3 741 2986 77 43 5 chrX 20520982 20521399 -146128897 - Lx LINE L1 -1 6653 6221 3 741 387 303 15 15 chrX 20521489 20521623 -146128673 + MIR SINE MIR 38 171 -91 3 741 729 298 94 10 chrX 20521702 20522000 -146128296 + MER46C DNA MER2_type 4 326 -12 3 741 656 247 19 0 chrX 20522214 20522376 -146127920 - ID_B1 SINE B4 -2 222 58 3 741 643 155 39 0 chrX 20522384 20522513 -146127783 + Lx7 LINE L1 7369 7502 -194 3 741 585 191 130 0 chrX 20522562 20522693 -146127603 - B1_Mus1 SINE Alu 0 148 1 3 741 227 190 17 17 chrX 20522784 20522843 -146127453 + Lx7 LINE L1 7599 7657 -39 3 741 273 261 11 43 chrX 20523684 20523776 -146126520 - MIR SINE MIR -91 171 83 4 741 225 381 0 0 chrX 20523912 20523996 -146126300 - L2a LINE L2 -313 3113 3030 4 741 449 288 31 61 chrX 20524114 20524310 -146125986 + MIR SINE MIR 65 254 -8 4 741 720 311 119 32 chrX 20524367 20524829 -146125467 + L2a LINE L2 2917 3418 -8 4 741 433 276 39 16 chrX 20524927 20525056 -146125240 - B1F SINE Alu -8 141 10 4 741 360 300 50 6 chrX 20525640 20525801 -146124495 - L2a LINE L2 -330 3096 2929 4 741 193 317 24 24 chrX 20526140 20526224 -146124072 + MIRb SINE MIR 160 243 -25 4 741 1204 48 0 20 chrX 20526327 20526477 -146123819 + B1_Mus1 SINE Alu 2 148 0 4 741 201 222 0 0 chrX 20527652 20527688 -146122608 + (CGG)n Simple_repeat Simple_repeat 2 37 0 4 741 550 297 68 19 chrX 20528634 20528795 -146121501 - ID_B1 SINE B4 -54 170 2 4 741 621 237 8 8 chrX 20529505 20529637 -146120659 + RSINE1 SINE B4 3 134 -31 5 741 251 279 81 11 chrX 20529774 20529861 -146120435 - L2a LINE L2 -21 3405 3313 5 741 693 242 17 24 chrX 20529867 20530050 -146120246 - B3A SINE B2 -20 175 10 5 741 305 213 103 39 chrX 20530207 20530285 -146120011 - PB1D10 SINE Alu -26 91 9 5 741 660 345 98 40 chrX 20530301 20530832 -146119464 - L2a LINE L2 -337 3082 2521 5 741 186 43 0 0 chrX 20531228 20531251 -146119045 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 741 239 299 151 13 chrX 20531334 20531493 -146118803 + L2a LINE L2 2377 2557 -862 5 741 267 328 101 22 chrX 20531687 20531865 -146118431 + L2a LINE L2 3234 3425 -1 5 741 3586 238 185 35 chrX 20531943 20533560 -146116736 + Lx9 LINE L1 5613 7538 -106 5 741 219 139 0 0 chrX 20533835 20533871 -146116425 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 741 1165 82 0 0 chrX 20533958 20534105 -146116191 + B1_Mm SINE Alu 1 147 0 5 741 201 242 82 100 chrX 20534421 20534531 -146115765 + L2b LINE L2 3052 3159 -267 5 741 1014 231 10 0 chrX 20534551 20534750 -146115546 - B3 SINE B2 -12 204 4 6 741 322 284 0 24 chrX 20534971 20535054 -146115242 + ID2 SINE ID 2 82 -1 6 741 379 320 79 13 chrX 20535169 20535321 -146114975 + RSINE1 SINE B4 4 165 0 6 741 345 253 241 39 chrX 20535551 20535756 -146114540 + B4A SINE B4 2 248 -44 6 741 277 262 139 9 chrX 20535936 20536044 -146114252 + L2b LINE L2 3287 3424 -2 5 741 424 272 44 0 chrX 20536222 20536336 -146113960 - PB1D7 SINE Alu -1 119 1 6 741 280 282 0 14 chrX 20536369 20536441 -146113855 - ID4 SINE ID -10 73 3 6 741 191 327 75 19 chrX 20536626 20536732 -146113564 + L2a LINE L2 3240 3351 -75 6 741 327 186 0 0 chrX 20537246 20537305 -146112991 + PB1D10 SINE Alu 44 102 -15 6 741 259 330 103 5 chrX 20537374 20537578 -146112718 + MIR SINE MIR 38 261 -1 6 741 450 263 145 7 chrX 20537966 20538104 -146112192 - RSINE1 SINE B4 -6 159 3 6 741 426 282 20 27 chrX 20538107 20538253 -146112043 - ID_B1 SINE B4 0 224 80 7 741 326 270 7 12 chrX 20538379 20538472 -146111824 - B1_Mur4 SINE Alu 0 120 25 7 741 378 301 18 9 chrX 20539464 20539578 -146110718 - B3A SINE B2 -83 115 1 7 741 916 199 73 15 chrX 20539595 20539799 -146110497 - B3 SINE B2 0 216 1 7 741 379 233 42 33 chrX 20539820 20539940 -146110356 - Lx8 LINE L1 0 7473 7353 7 741 266 309 78 60 chrX 20540531 20540813 -146109483 + Lx8 LINE L1 6814 7100 -373 7 741 470 296 38 0 chrX 20541061 20541193 -146109103 - B1F SINE Alu -7 142 6 7 741 226 286 86 0 chrX 20541269 20541339 -146108957 + MLT1C LTR MaLR 83 158 -347 7 741 1212 61 0 0 chrX 20541361 20541508 -146108788 - B1_Mus1 SINE Alu 0 148 2 7 741 318 26 0 0 chrX 20541799 20541838 -146108458 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 741 1077 89 7 7 chrX 20542014 20542161 -146108135 - B1_Mm SINE Alu 0 147 1 8 741 312 325 0 0 chrX 20542274 20542354 -146107942 + ID4 SINE ID 2 81 -2 8 741 416 327 13 85 chrX 20542354 20542578 -146107718 + MLT1C LTR MaLR 252 459 -8 7 741 7657 62 15 16 chrX 20542861 20544144 -146106152 - L1_Mus2 LINE L1 0 6566 5293 8 741 1197 48 0 7 chrX 20544144 20544292 -146106004 - B1_Mus2 SINE Alu 0 147 1 8 741 6474 99 8 27 chrX 20544292 20544645 -146105651 - L1_Mus2 LINE L1 -591 5292 4949 8 741 3181 160 46 5 chrX 20545209 20545799 -146104497 - RLTR18 LTR ERVK -2 614 1 8 741 1260 41 0 0 chrX 20545815 20545962 -146104334 - B1_Mm SINE Alu 0 147 1 8 741 507 229 18 0 chrX 20545962 20546071 -146104225 - RLTR18-int LTR ERVK -7 5354 5244 8 741 428 58 5 5 chrX 20546072 20546131 -146104165 - Lx4B LINE L1 -1392 5666 5608 8 741 3896 41 0 0 chrX 20546131 20546590 -146103706 + L1Md_T LINE L1 6124 6582 0 8 741 268 176 0 0 chrX 20546625 20546676 -146103620 - RLTR18-int LTR ERVK -345 5016 4966 8 741 1933 212 134 25 chrX 20546717 20547386 -146102910 - RLTR18-int LTR ERVK -494 4867 4126 8 741 1153 56 0 14 chrX 20547811 20547957 -146102339 - B1_Mus2 SINE Alu -2 145 2 8 741 328 172 0 45 chrX 20548660 20548727 -146101569 - B1_Mur3 SINE Alu 0 149 86 8 741 7217 115 6 3 chrX 20548730 20550054 -146100242 - Lx LINE L1 -25 6629 5303 9 741 2215 83 26 0 chrX 20550040 20550352 -146099944 - L1_Mus2 LINE L1 -488 6078 5759 9 741 23703 145 11 55 chrX 20550358 20550686 -146099610 - L1_Mus2 LINE L1 -410 5473 5149 9 741 3570 77 2 0 chrX 20550686 20551143 -146099153 + L1_Mus1 LINE L1 6110 6567 0 9 741 23703 139 13 52 chrX 20551143 20555495 -146094801 - L1_Mus2 LINE L1 -735 5148 973 9 741 1708 161 15 132 chrX 20555495 20555959 -146094337 - RMER17C LTR ERVK 0 410 1 9 741 4320 72 39 22 chrX 20555959 20556220 -146094076 - L1_Mus2 LINE L1 -2943 972 713 9 741 512 182 157 15 chrX 20556580 20556714 -146093582 - RMER17C-int LTR ERVK -3085 153 1 9 741 462 214 0 97 chrX 20556718 20556741 -146093555 + MT2B LTR ERVL 146 156 -445 9 741 993 48 0 0 chrX 20556741 20556867 -146093429 + B1_Mm SINE Alu 2 127 -20 9 741 468 0 0 0 chrX 20556867 20556919 -146093377 + (CA)n Simple_repeat Simple_repeat 1 52 0 9 741 1348 155 23 42 chrX 20556919 20557228 -146093068 - RMER17C LTR ERVK -16 394 92 9 741 299 137 158 40 chrX 20557289 20557365 -146092931 - MTD LTR MaLR 0 419 335 9 741 625 312 46 17 chrX 20557361 20557599 -146092697 + RLTR18 LTR ERVK 59 303 -313 9 741 1057 241 19 23 chrX 20557672 20557935 -146092361 + RLTR18B LTR ERVK 186 447 -65 1 741 1069 196 99 131 chrX 20557935 20558310 -146091986 - RMER16 LTR ERVK 0 533 171 1 741 939 197 88 0 chrX 20559225 20559418 -146090878 - B3 SINE B2 -6 210 1 1 741 1487 79 0 16 chrX 20559685 20559877 -146090419 - B2_Mm2 SINE B2 -5 190 2 1 741 1586 62 0 15 chrX 20560033 20560229 -146090067 - B2_Mm2 SINE B2 -1 194 2 1 741 1488 98 0 5 chrX 20560386 20560580 -146089716 - B2_Mm2 SINE B2 -1 194 2 1 741 316 264 13 115 chrX 20560715 20560882 -146089414 + L1MC LINE L1 3962 4112 -2034 1 741 308 253 114 30 chrX 20560974 20561002 -146089294 + L1MC LINE L1 4111 4136 -2010 1 741 3265 64 8 2 chrX 20561002 20561396 -146088900 - MTA_Mm LTR MaLR 0 396 1 1 741 308 253 114 30 chrX 20561396 20561534 -146088762 + L1MC LINE L1 4137 4291 -1855 1 741 701 189 0 57 chrX 20561609 20561749 -146088547 + B2_Mm2 SINE B2 11 142 -53 1 741 311 335 94 35 chrX 20561775 20561945 -146088351 - L1MDa LINE L1 -6348 285 106 1 741 275 204 0 109 chrX 20562043 20562098 -146088198 - B3 SINE B2 -125 91 43 1 741 975 127 34 27 chrX 20562174 20562320 -146087976 - B1_Mm SINE Alu 0 147 1 1 741 200 341 158 11 chrX 20562821 20563005 -146087291 - MIRb SINE MIR -34 234 24 1 741 968 194 123 5 chrX 20563477 20563664 -146086632 - B3 SINE B2 -7 209 1 1 741 368 275 61 44 chrX 20563680 20563794 -146086502 - PB1D10 SINE Alu 0 117 2 1 741 569 127 0 0 chrX 20564053 20564132 -146086164 - BC1_Mm scRNA scRNA -73 79 1 1 741 811 148 48 34 chrX 20564140 20564180 -146086116 - B1_Mur2 SINE Alu 0 149 106 1 741 3117 40 0 0 chrX 20564180 20564526 -146085770 + ORR1A1 LTR MaLR 1 346 0 1 741 811 148 48 34 chrX 20564526 20564632 -146085664 - B1_Mur2 SINE Alu -44 105 1 1 741 23 33 0 0 chrX 20564642 20564672 -146085624 + AT_rich Low_complexity Low_complexity 1 30 0 1 741 388 357 64 0 chrX 20564790 20564930 -146085366 - B1F1 SINE Alu 0 149 1 1 741 234 324 29 0 chrX 20564930 20565032 -146085264 - L1M5 LINE L1 -537 5703 5599 1 741 569 293 138 23 chrX 20565174 20565700 -146084596 + L1M5 LINE L1 5187 5776 -397 1 741 23991 112 5 43 chrX 20565852 20568675 -146081621 - L1VL1 LINE L1 -934 4949 2156 1 741 3168 37 13 13 chrX 20568675 20569055 -146081241 - L1Md_F2 LINE L1 0 6582 6203 1 741 23991 100 14 22 chrX 20569055 20569585 -146080711 - L1VL1 LINE L1 -3728 2155 1629 1 741 792 59 0 10 chrX 20569585 20569687 -146080609 - B1_Mm SINE Alu -5 142 42 1 741 23991 100 14 22 chrX 20569687 20570882 -146079414 - L1VL1 LINE L1 -3728 1628 437 1 741 449 268 8 82 chrX 20571215 20571337 -146078959 - ID_B1 SINE B4 -109 115 3 1 741 483 303 7 58 chrX 20571347 20571501 -146078795 - ID_B1 SINE B4 -3 221 76 1 741 8155 89 24 97 chrX 20571538 20572666 -146077630 - Lx3A LINE L1 -7 6974 5847 1 741 3550 49 102 2 chrX 20572666 20573098 -146077198 - MT2C_Mm LTR ERVL 0 475 1 1 741 8155 89 24 97 chrX 20573098 20573298 -146076998 - Lx3A LINE L1 -1135 5846 5743 1 741 2357 92 93 20 chrX 20573303 20573658 -146076638 - Lx3_Mus LINE L1 0 7009 6629 1 741 306 125 0 0 chrX 20573683 20573731 -146076565 + (T)n Simple_repeat Simple_repeat 1 48 0 1 741 1251 61 0 7 chrX 20573731 20573879 -146076417 - B1_Mus1 SINE Alu 0 148 2 1 741 2873 70 43 0 chrX 20573882 20574255 -146076041 - Lx3A LINE L1 -134 5752 5364 1 741 234 329 25 12 chrX 20574293 20574373 -146075923 + ID2 SINE ID 1 81 -2 1 741 523 324 47 13 chrX 20574420 20574570 -146075726 + B3A SINE B2 2 156 -42 1 741 234 0 0 0 chrX 20574572 20574598 -146075698 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 741 411 272 93 22 chrX 20574834 20574973 -146075323 + B1F1 SINE Alu 1 149 0 1 741 714 130 157 121 chrX 20575140 20575306 -146074990 - ORR1A3 LTR MaLR -154 172 1 1 741 6991 120 54 42 chrX 20575308 20575826 -146074470 - ORR1A3-int LTR MaLR 0 1963 1488 1 741 4758 44 32 32 chrX 20575826 20576413 -146073883 - LTRIS_Mus LTR ERV1 0 587 1 1 741 6991 120 54 42 chrX 20576413 20577124 -146073172 - ORR1A3-int LTR MaLR -476 1487 719 1 741 384 92 0 198 chrX 20577084 20577165 -146073131 - MT2B LTR ERVL -314 287 223 1 741 973 244 10 19 chrX 20577190 20577399 -146072897 - ORR1D2 LTR MaLR -163 207 1 1 741 1792 170 96 11 chrX 20577705 20578061 -146072235 - ORR1B1 LTR MaLR -8 386 1 1 92 558 297 134 61 chrX 20578259 20578521 -146071775 - B4 SINE B4 -11 281 1 1 742 21 0 0 0 chrX 20578528 20578549 -146071747 + AT_rich Low_complexity Low_complexity 1 21 0 1 742 375 23 0 0 chrX 20578645 20578689 -146071607 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 742 398 212 0 165 chrX 20578689 20578768 -146071528 - B3A SINE B2 -62 136 59 1 742 527 281 83 37 chrX 20578791 20579112 -146071184 - MER92C LTR ERV1 -33 521 112 1 742 8143 61 11 13 chrX 20579408 20579992 -146070304 - L1_Mus3 LINE L1 -4 6634 6045 1 742 234 0 0 0 chrX 20579992 20580018 -146070278 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 742 1300 48 0 0 chrX 20580018 20580163 -146070133 - B1_Mm SINE Alu -2 145 1 1 742 8143 101 6 7 chrX 20580163 20581092 -146069204 - L1_Mus3 LINE L1 -594 6044 5123 1 742 192 40 0 0 chrX 20581099 20581124 -146069172 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1 742 1137 83 0 6 chrX 20581124 20581281 -146069015 - B2_Mm2 SINE B2 -38 157 2 1 742 3083 148 30 8 chrX 20581281 20581806 -146068490 - L1_Mus3 LINE L1 -747 5136 4600 1 742 314 133 63 48 chrX 20581810 20581873 -146068423 + B1_Mm SINE Alu 84 147 0 1 742 21 36 0 0 chrX 20581873 20581901 -146068395 + AT_rich Low_complexity Low_complexity 1 28 0 1 742 869 309 117 50 chrX 20581901 20582467 -146067829 + MLT1H-int LTR MaLR 320 923 -486 1 742 384 238 150 65 chrX 20582456 20582609 -146067687 + B3 SINE B2 49 214 -2 1 742 3300 51 5 27 chrX 20583178 20583583 -146066713 + MTA_Mm LTR MaLR 1 396 0 1 742 326 71 0 0 chrX 20583583 20583625 -146066671 + MTA_Mm-int LTR MaLR 1 42 -1056 1 742 4970 151 80 5 chrX 20583637 20584447 -146065849 + MERVL_2A-int LTR ERVL 4726 5596 -165 1 742 1491 186 126 31 chrX 20584447 20584460 -146065836 - RMER16 LTR ERVK 0 533 526 1 742 4709 8 0 12 chrX 20584460 20584959 -146065337 - MT2_Mm LTR ERVL 0 493 1 1 742 1491 178 105 26 chrX 20584959 20585353 -146064943 - RMER16 LTR ERVK -8 525 1 1 742 287 170 0 0 chrX 20585354 20585401 -146064895 + MERVL_2A-int LTR ERVL 5592 5638 -123 1 742 352 217 0 0 chrX 20585421 20585490 -146064806 + MERVL_2A-int LTR ERVL 5233 5301 -460 1 742 610 152 45 0 chrX 20585516 20585628 -146064668 + MERVL_2A-int LTR ERVL 5619 5735 -26 1 742 584 235 96 25 chrX 20585628 20585785 -146064511 + MTA_Mm-int LTR MaLR 955 1122 -387 1 742 482 211 0 9 chrX 20585786 20585901 -146064395 + GA-rich Low_complexity Low_complexity 1 114 0 1 742 2074 152 39 13 chrX 20585906 20586292 -146064004 + MTA_Mm-int LTR MaLR 1114 1509 0 1 742 1946 165 33 125 chrX 20586292 20586715 -146063581 + MTA_Mm LTR MaLR 1 384 0 1 742 248 70 23 0 chrX 20586902 20586945 -146063351 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 742 1228 88 0 0 chrX 20588131 20588279 -146062017 + B1_Mus1 SINE Alu 1 148 0 1 742 588 260 193 0 chrX 20588337 20588518 -146061778 + ID_B1 SINE B4 2 217 -7 1 742 249 277 43 65 chrX 20588539 20588678 -146061618 + L1MA7 LINE L1 6155 6290 -1 1 742 435 224 14 16 chrX 20588779 20588893 -146061403 + B1_Mur2 SINE Alu 3 144 -5 1 742 210 91 0 0 chrX 20589247 20589280 -146061016 + (TCTCCC)n Simple_repeat Simple_repeat 4 36 0 1 742 818 139 16 8 chrX 20589292 20589415 -146060881 - RLTR19 LTR ERVK 0 499 376 1 742 1086 106 25 138 chrX 20589417 20589657 -146060639 + RLTR19-int LTR ERVK 1167 1379 -4758 1 742 1085 184 186 151 chrX 20589657 20590025 -146060271 - RMER6C LTR ERVK -205 485 103 1 742 3137 29 0 25 chrX 20590025 20590380 -146059916 + ORR1A1 LTR MaLR 1 346 0 1 742 1085 184 186 151 chrX 20590380 20590480 -146059816 - RMER6C LTR ERVK -588 102 1 1 742 7373 61 10 29 chrX 20591254 20592236 -146058060 + L1_Mus2 LINE L1 5603 6566 0 1 742 1349 46 6 0 chrX 20592279 20592452 -146057844 + (TTC)n Simple_repeat Simple_repeat 2 175 0 1 742 233 57 0 28 chrX 20592453 20592489 -146057807 + (TCC)n Simple_repeat Simple_repeat 3 37 0 1 742 759 130 0 68 chrX 20592494 20592626 -146057670 - B1_Mus1 SINE Alu -1 147 25 1 742 4472 83 52 46 chrX 20592679 20593350 -146056946 - RLTR1B-int LTR ERV1 -2624 675 1 1 742 1117 96 13 0 chrX 20593350 20593506 -146056790 - RLTR1B LTR ERV1 0 512 355 1 742 473 69 0 0 chrX 20593507 20593565 -146056731 - RLTR1B LTR ERV1 -100 412 355 1 742 9663 200 19 221 chrX 20593565 20595027 -146055269 - L1Md_F LINE L1 -393 5484 3980 1 742 4210 118 84 24 chrX 20595027 20595740 -146054556 + RMER6A LTR ERVK 1 756 0 1 742 11548 159 24 99 chrX 20595740 20600672 -146049624 - L1Md_F LINE L1 0 5883 218 1 742 845 233 6 12 chrX 20600730 20600891 -146049405 - RSINE1 SINE B4 -4 161 2 1 742 1547 191 87 13 chrX 20602085 20602750 -146047546 + RMER13A LTR ERVK 1 860 0 1 742 230 295 0 0 chrX 20603080 20603141 -146047155 - Lx7 LINE L1 -618 7078 7018 1 742 665 176 124 31 chrX 20603496 20603625 -146046671 - B1_Mur2 SINE Alu -8 141 1 1 742 464 279 244 0 chrX 20603653 20603850 -146046446 - Tigger7 DNA MER2_type -2246 245 1 1 742 360 0 0 0 chrX 20604890 20604930 -146045366 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 1 742 268 237 102 0 chrX 20605083 20605142 -146045154 + B3A SINE B2 1 65 -133 1 742 375 321 63 36 chrX 20606273 20606574 -146043722 - L1MC4a LINE L1 -1943 5939 5631 1 742 298 313 0 0 chrX 20606601 20606684 -146043612 - L1M7 LINE L1 -5541 677 595 1 742 526 282 12 12 chrX 20607198 20608465 -146041831 - MMSAT4 Satellite Satellite -27 1267 1 1 742 7823 61 40 1 chrX 20608957 20610013 -146040283 + L1_Mus4 LINE L1 5539 6635 -1 1 742 273 206 131 21 chrX 20610072 20610168 -146040128 - PB1D7 SINE Alu -12 108 1 1 742 300 211 92 84 chrX 20610575 20610694 -146039602 + MER104 DNA Tc2 33 152 -29 1 742 317 62 0 20 chrX 20610704 20610753 -146039543 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 742 726 243 141 16 chrX 20610805 20610989 -146039307 - B3 SINE B2 -9 207 1 1 742 1279 48 0 0 chrX 20611088 20611234 -146039062 - B1_Mus2 SINE Alu 0 147 2 1 742 3294 89 24 11 chrX 20611234 20611686 -146038610 + Lx3A LINE L1 6352 6809 -172 1 742 400 241 146 29 chrX 20611732 20611903 -146038393 + Lx8 LINE L1 7283 7473 0 1 742 6164 154 43 23 chrX 20611948 20613066 -146037230 + Lx5 LINE L1 5911 7050 0 1 742 1061 73 0 0 chrX 20613091 20613228 -146037068 + B1_Mus1 SINE Alu 2 138 -10 1 742 213 65 0 0 chrX 20613228 20613259 -146037037 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 742 419 284 0 0 chrX 20613766 20613900 -146036396 - MurSatRep1 Unknown Unknown -1393 744 611 2 742 787 263 77 22 chrX 20613959 20614181 -146036115 + MTD LTR MaLR 52 285 -134 2 742 599 214 16 45 chrX 20614246 20614473 -146035823 - MTC LTR MaLR -5 416 93 2 742 676 269 92 85 chrX 20614567 20614860 -146035436 + MTEa LTR MaLR 8 302 -77 2 742 5390 184 22 161 chrX 20615033 20615659 -146034637 + Lx5 LINE L1 1426 2046 -3840 2 742 555 43 0 0 chrX 20615659 20615729 -146034567 + (CA)n Simple_repeat Simple_repeat 2 71 0 2 742 5390 184 22 161 chrX 20615729 20617027 -146033269 + Lx5 LINE L1 2047 3084 -2802 2 742 2535 163 33 18 chrX 20617023 20617457 -146032839 + Lx5 LINE L1 3934 4376 -1501 2 742 225 0 0 0 chrX 20617457 20617482 -146032814 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 2 742 2535 163 33 18 chrX 20617482 20617558 -146032738 + Lx5 LINE L1 4377 4451 -1426 2 742 12909 127 25 3 chrX 20617557 20619426 -146030870 + L1_Mus4 LINE L1 395 4066 -1817 2 742 480 35 0 0 chrX 20619426 20619484 -146030812 + (TC)n Simple_repeat Simple_repeat 2 59 0 2 742 12909 159 31 2 chrX 20619484 20619991 -146030305 + L1_Mus4 LINE L1 4067 4639 -1244 2 742 204 67 0 0 chrX 20619991 20620021 -146030275 + (CAA)n Simple_repeat Simple_repeat 2 31 0 2 742 12909 112 15 3 chrX 20620021 20622008 -146028288 + L1_Mus4 LINE L1 4640 6627 -9 2 742 7424 148 13 51 chrX 20622020 20623115 -146027181 + Lx5 LINE L1 4440 5491 -386 2 742 4706 94 134 4 chrX 20623115 20623831 -146026465 - Lx3_Mus LINE L1 -5 7004 6196 2 742 7646 145 54 17 chrX 20623831 20625334 -146024962 + Lx5 LINE L1 5492 7047 -3 2 742 446 222 126 82 chrX 20625360 20625615 -146024681 + L1ME1 LINE L1 1725 1990 -4643 2 742 397 293 24 16 chrX 20625633 20625758 -146024538 + PB1 SINE Alu 1 126 -1 2 742 24 32 0 0 chrX 20625970 20626001 -146024295 + AT_rich Low_complexity Low_complexity 1 31 0 2 742 507 248 13 7 chrX 20626333 20626483 -146023813 + L1MD2 LINE L1 30 180 -6367 2 742 444 261 65 0 chrX 20626732 20626824 -146023472 + RSINE1 SINE B4 68 165 0 2 742 398 244 124 44 chrX 20626868 20627117 -146023179 + L1ME1 LINE L1 1897 2175 -4458 2 742 358 325 48 22 chrX 20627119 20627241 -146023055 + PB1 SINE Alu 1 115 -2 2 742 5561 16 0 0 chrX 20627313 20627942 -146022354 + L1Md_A LINE L1 5954 6582 0 2 742 409 285 111 25 chrX 20627945 20628143 -146022153 + L1ME1 LINE L1 2167 2381 -4252 2 742 361 267 41 61 chrX 20628156 20628260 -146022036 + PB1D7 SINE Alu 1 104 -210 2 742 471 214 30 10 chrX 20628305 20628404 -146021892 + PB1D9 SINE Alu 12 112 -8 2 742 228 286 62 16 chrX 20628590 20628654 -146021642 + ID4_ SINE ID 17 83 0 2 742 260 240 70 39 chrX 20628700 20628856 -146021440 + L1ME1 LINE L1 2437 2597 -4036 2 742 489 280 161 86 chrX 20628867 20628972 -146021324 + MLT1B LTR MaLR 1 119 -271 2 742 255 189 105 26 chrX 20628972 20629048 -146021248 + ID4 SINE ID 2 83 0 2 742 489 280 161 86 chrX 20629048 20629302 -146020994 + MLT1B LTR MaLR 120 387 -3 2 742 540 298 21 14 chrX 20629379 20629522 -146020774 + B1F1 SINE Alu 1 144 -5 2 742 751 238 124 0 chrX 20629528 20629713 -146020583 + B3 SINE B2 1 208 -8 2 742 283 188 30 127 chrX 20629724 20629889 -146020407 + L1ME1 LINE L1 2663 2811 -3726 2 742 522 289 39 0 chrX 20629939 20630067 -146020229 + B1F SINE Alu 10 142 -7 2 742 202 309 0 14 chrX 20630187 20630256 -146020040 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 2 742 372 291 99 78 chrX 20630263 20630449 -146019847 + L1ME1 LINE L1 2882 3077 -3460 2 742 1507 22 50 0 chrX 20630449 20630629 -146019667 - B2_Mm1t SINE B2 -3 190 2 2 742 372 291 99 78 chrX 20630629 20630826 -146019470 + L1ME1 LINE L1 3078 3273 -3264 2 742 313 207 109 0 chrX 20630920 20631044 -146019252 + L1ME1 LINE L1 3288 3429 -3108 2 742 429 321 28 0 chrX 20631044 20631153 -146019143 - PB1D10 SINE Alu -5 112 1 2 742 688 262 7 28 chrX 20631153 20631218 -146019078 - ID SINE ID -143 81 20 2 742 480 224 83 18 chrX 20631247 20631356 -146018940 - RSINE1 SINE B4 -46 119 4 2 742 612 278 123 72 chrX 20631364 20631539 -146018757 + L1ME1 LINE L1 3427 3617 -2920 2 742 938 213 35 30 chrX 20631539 20631742 -146018554 + B3 SINE B2 3 206 -10 2 742 612 278 123 72 chrX 20631742 20631996 -146018300 + L1ME1 LINE L1 3618 3878 -2659 2 742 305 298 105 46 chrX 20632156 20632296 -146018000 + L1MC LINE L1 3547 3697 -2449 2 742 598 207 95 15 chrX 20632296 20632433 -146017863 + B1_Mur3 SINE Alu 1 148 -1 2 742 305 298 105 46 chrX 20632433 20632577 -146017719 + L1MC LINE L1 3698 3848 -2298 2 742 404 301 71 38 chrX 20632591 20632774 -146017522 - Lx8 LINE L1 -600 6873 6685 2 742 441 54 0 0 chrX 20632797 20632853 -146017443 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 742 1948 88 63 11 chrX 20632853 20633140 -146017156 + ORR1A2 LTR MaLR 5 306 -21 2 742 315 0 0 0 chrX 20633149 20633184 -146017112 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 742 255 308 117 60 chrX 20633271 20633554 -146016742 - L1M5 LINE L1 -1805 4341 4027 2 742 222 37 0 0 chrX 20633554 20633581 -146016715 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 2 742 1268 34 0 0 chrX 20633584 20633731 -146016565 - B1_Mm SINE Alu 0 147 1 2 742 281 294 47 13 chrX 20633731 20633878 -146016418 - L1M5 LINE L1 -2120 4026 3882 2 742 279 277 0 0 chrX 20634024 20634089 -146016207 + RMER15 LTR ERVL 403 467 -108 2 742 616 272 56 130 chrX 20634263 20634618 -146015678 + MLT1A LTR MaLR 4 332 -42 2 742 550 251 189 35 chrX 20634715 20635058 -146015238 + L1ME1 LINE L1 4819 5214 -1323 2 742 298 312 30 23 chrX 20635074 20635205 -146015091 + B1F SINE Alu 1 132 -17 2 742 331 254 50 142 chrX 20635276 20635593 -146014703 + L1M3 LINE L1 5073 5360 -780 2 742 233 284 29 43 chrX 20635600 20635670 -146014626 + PB1D10 SINE Alu 15 83 -34 2 742 213 210 457 0 chrX 20635670 20635681 -146014615 + ID_B1 SINE B4 96 213 -11 2 742 237 225 42 14 chrX 20635766 20635838 -146014458 + L1MA7 LINE L1 6159 6232 -59 2 742 783 227 66 49 chrX 20635845 20636048 -146014248 - MTD LTR MaLR -201 218 1 2 742 438 216 113 104 chrX 20636181 20636403 -146013893 + L1MD1 LINE L1 5911 6134 -108 2 742 372 315 68 28 chrX 20636513 20636736 -146013560 + L1ME1 LINE L1 6278 6509 -61 2 742 505 331 57 0 chrX 20637195 20637352 -146012944 + Tigger5 DNA MER2_type 37 202 -2204 2 742 246 258 158 21 chrX 20637367 20637462 -146012834 + Tigger5 DNA MER2_type 2299 2406 0 2 742 202 143 24 0 chrX 20637804 20637846 -146012450 + (TTTG)n Simple_repeat Simple_repeat 3 45 0 2 742 326 123 0 34 chrX 20637847 20637906 -146012390 - PB1D9 SINE Alu 0 120 64 2 742 435 295 8 83 chrX 20637892 20638025 -146012271 - ID_B1 SINE B4 -91 133 11 2 742 22 0 0 0 chrX 20638248 20638270 -146012026 + AT_rich Low_complexity Low_complexity 1 22 0 2 742 1048 58 65 0 chrX 20638386 20638524 -146011772 - B1_Mus1 SINE Alu 0 148 2 2 742 1168 28 0 40 chrX 20640211 20640361 -146009935 - B1_Mus1 SINE Alu 0 148 5 2 742 229 273 248 8 chrX 20641028 20641161 -146009135 + MIR SINE MIR 77 241 -21 2 742 212 312 179 12 chrX 20641601 20641763 -146008533 - MIRb SINE MIR -32 236 48 2 742 288 320 48 16 chrX 20642009 20642133 -146008163 + MLT1A1 LTR MaLR 6 133 -275 2 742 291 284 67 22 chrX 20642201 20642291 -146008005 + MLT1A1 LTR MaLR 32 125 -283 2 742 2510 159 12 0 chrX 20642308 20642716 -146007580 + MTC LTR MaLR 1 413 -8 2 742 453 128 50 60 chrX 20642719 20642819 -146007477 - RLTR23 LTR ERV1 0 430 332 2 742 597 261 58 13 chrX 20643394 20643549 -146006747 + MLT1A1 LTR MaLR 246 407 -1 2 742 6795 87 7 16 chrX 20643895 20645330 -146004966 - L1_Mus2 LINE L1 0 6566 5147 2 742 6858 74 31 1 chrX 20645785 20647035 -146003261 - L1_Mus1 LINE L1 -2 6565 5281 2 742 2848 36 0 3 chrX 20647035 20647373 -146002923 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 742 6955 29 2 6 chrX 20647373 20648228 -146002068 - IAPEz-int LTR ERVK 0 6481 5630 2 742 23507 35 30 12 chrX 20648214 20651228 -145999068 - IAPEz-int LTR ERVK -3405 3076 8 2 742 2848 36 0 3 chrX 20651228 20651566 -145998730 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 742 10964 96 7 6 chrX 20651566 20652653 -145997643 - L1_Mus1 LINE L1 -597 5286 4209 2 742 306 0 0 0 chrX 20652653 20652687 -145997609 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 742 10964 96 7 6 chrX 20652687 20653268 -145997028 - L1_Mus1 LINE L1 -1675 4208 3618 2 742 496 209 61 35 chrX 20653891 20654005 -145996291 - PB1D9 SINE Alu -2 118 2 2 742 315 0 0 0 chrX 20654361 20654396 -145995900 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 742 274 316 67 61 chrX 20655246 20655411 -145994885 + MIRb SINE MIR 73 238 -30 2 742 7196 84 1 3 chrX 20655430 20657176 -145993120 + L1_Mus2 LINE L1 4824 6566 0 2 742 347 279 39 0 chrX 20657195 20657299 -145992997 + PB1D10 SINE Alu 10 117 0 2 742 537 261 12 20 chrX 20658806 20659955 -145990341 - MMSAT4 Satellite Satellite -8 1140 1 2 742 300 27 0 0 chrX 20660885 20660922 -145989374 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 742 485 232 0 0 chrX 20661358 20661470 -145988826 - MurSatRep1 Unknown Unknown -1415 722 611 2 742 198 0 0 0 chrX 20661632 20661654 -145988642 + (GA)n Simple_repeat Simple_repeat 2 23 0 2 742 371 260 13 0 chrX 20661753 20661830 -145988466 + ID4_ SINE ID 1 78 -5 2 742 1125 285 80 23 chrX 20661859 20662421 -145987875 + L1ME3 LINE L1 5269 5870 -292 2 742 376 268 0 0 chrX 20662421 20662503 -145987793 + ID4_ SINE ID 2 83 0 2 742 1125 282 78 22 chrX 20662503 20662607 -145987689 + L1ME3 LINE L1 5871 5972 -190 2 742 495 290 36 10 chrX 20663268 20663407 -145986889 + PB1D10 SINE Alu 1 149 0 2 742 251 312 16 0 chrX 20663425 20663489 -145986807 + tRNA-Ala-GCY_ tRNA tRNA 2 66 -9 2 742 297 334 137 26 chrX 20663573 20663759 -145986537 + MIR SINE MIR 58 266 -2 2 742 28 0 0 0 chrX 20664267 20664295 -145986001 + AT_rich Low_complexity Low_complexity 1 28 0 2 742 229 211 86 17 chrX 20664404 20664462 -145985834 - ID4_ SINE ID -17 66 5 2 742 382 261 200 0 chrX 20664552 20664667 -145985629 - B1F1 SINE Alu -5 144 7 2 742 227 271 126 36 chrX 20665123 20665234 -145985062 + L4 LINE RTE 1707 1827 -202 2 742 571 236 196 64 chrX 20665390 20665594 -145984702 - MIR SINE MIR -30 232 2 2 742 331 244 70 106 chrX 20667473 20667510 -145982786 - MER92B LTR ERV1 -499 137 104 2 742 527 299 155 59 chrX 20667510 20667851 -145982445 + MLT1A LTR MaLR 1 374 0 2 742 331 244 70 106 chrX 20667851 20667955 -145982341 - MER92B LTR ERV1 -533 103 1 2 742 518 329 24 77 chrX 20668913 20668971 -145981325 - L1MB5 LINE L1 0 6180 6134 2 742 2529 39 3 0 chrX 20668971 20669257 -145981039 - L1Md_F3 LINE L1 -8 6576 6290 2 742 705 285 50 47 chrX 20669257 20669537 -145980759 - L1MB5 LINE L1 -36 6138 5860 2 742 345 264 9 9 chrX 20669537 20669644 -145980652 - MLT1A1 LTR MaLR 0 408 302 2 742 186 43 0 0 chrX 20670022 20670045 -145980251 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 742 9317 102 41 24 chrX 20670137 20670341 -145979955 - Lx2A1 LINE L1 -5 7003 6795 2 742 2992 61 0 0 chrX 20670341 20670687 -145979609 - ORR1A1 LTR MaLR 0 346 1 2 742 14322 63 11 3 chrX 20670687 20672465 -145977831 - ORR1A1-int LTR MaLR 0 1792 1 2 742 2789 71 15 0 chrX 20672469 20672806 -145977490 - ORR1A1 LTR MaLR -4 342 1 2 742 9317 102 41 24 chrX 20672806 20673716 -145976580 - Lx2A1 LINE L1 -214 6794 5878 2 742 338 42 21 0 chrX 20673716 20673764 -145976532 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 742 9317 131 26 14 chrX 20673764 20674216 -145976080 - Lx2A1 LINE L1 -1131 5877 5405 2 742 9165 149 7 2 chrX 20674220 20675735 -145974561 + L1_Mur2 LINE L1 3136 4658 -1219 2 742 4217 100 96 5 chrX 20675726 20676382 -145973914 - L1VL2 LINE L1 -5317 1018 303 2 742 207 0 0 0 chrX 20676434 20676457 -145973839 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 742 234 0 0 0 chrX 20676457 20676482 -145973814 + (GA)n Simple_repeat Simple_repeat 2 27 0 2 742 283 284 61 12 chrX 20678177 20678197 -145972099 - B4 SINE B4 -119 173 88 3 742 420 145 0 0 chrX 20678197 20678259 -145972037 - B1_Mus1 SINE Alu -84 64 3 3 742 2936 125 81 2 chrX 20678267 20678748 -145971548 - L1_Mm LINE L1 -91 5792 5274 3 742 4901 144 29 34 chrX 20678748 20679685 -145970611 + L1Md_T LINE L1 274 1205 -5411 3 742 37260 32 0 0 chrX 20679691 20684108 -145966188 + L1Md_T LINE L1 1170 5586 -297 3 742 8551 55 0 0 chrX 20684108 20685104 -145965192 + L1Md_T LINE L1 5587 6582 0 3 742 1888 198 41 5 chrX 20685130 20685520 -145964776 - L1_Mur2 LINE L1 -595 5282 4879 3 742 1448 308 21 30 chrX 20685550 20686122 -145964174 - MurERV4-int LTR ERVK -3071 2189 1623 3 742 353 125 0 30 chrX 20686213 20686230 -145964066 + (CATA)n Simple_repeat Simple_repeat 1 17 0 3 742 3666 20 5 0 chrX 20686230 20686624 -145963672 - MTA_Mm LTR MaLR 0 396 1 3 742 353 125 0 30 chrX 20686624 20686672 -145963624 + (CATA)n Simple_repeat Simple_repeat 2 48 0 3 742 1773 157 11 11 chrX 20686689 20686973 -145963323 - Lx3B LINE L1 0 6973 6690 3 742 2555 54 12 18 chrX 20686973 20687313 -145962983 + ORR1A1 LTR MaLR 1 338 -8 3 742 10930 123 32 4 chrX 20687315 20689597 -145960699 - Lx3B LINE L1 -363 6695 4277 3 742 234 105 0 0 chrX 20689598 20689636 -145960660 + (TTTTC)n Simple_repeat Simple_repeat 2 39 0 3 742 341 155 0 0 chrX 20690270 20690328 -145959968 - ORR1B1 LTR MaLR 0 394 337 3 742 21 0 0 0 chrX 20690328 20690349 -145959947 + AT_rich Low_complexity Low_complexity 1 21 0 3 742 910 148 17 33 chrX 20690531 20690712 -145959584 - Lx4A LINE L1 -2 7056 6879 3 742 180 0 0 0 chrX 20692027 20692047 -145958249 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 742 409 331 23 31 chrX 20692070 20692198 -145958098 - RSINE1 SINE B4 -37 128 2 3 742 273 233 0 88 chrX 20692386 20692466 -145957830 + PB1D10 SINE Alu 3 75 -42 3 742 1159 75 31 0 chrX 20692610 20692769 -145957527 + L1Md_F2 LINE L1 6418 6581 -1 3 742 405 272 0 0 chrX 20693025 20693106 -145957190 + ID4 SINE ID 2 82 -1 3 742 615 309 95 38 chrX 20694356 20694618 -145955678 + B4 SINE B4 2 278 -14 3 742 180 319 90 49 chrX 20695359 20695481 -145954815 - L3 LINE CR1 -1106 3383 3257 3 742 247 316 75 25 chrX 20697176 20697296 -145953000 - PB1 SINE Alu 0 127 2 3 742 249 222 0 0 chrX 20697644 20697698 -145952598 + A-rich Low_complexity Low_complexity 1 54 0 3 742 300 158 0 0 chrX 20698291 20698348 -145951948 + GA-rich Low_complexity Low_complexity 1 57 0 3 742 1323 72 0 0 chrX 20698348 20698528 -145951768 + (GGA)n Simple_repeat Simple_repeat 1 180 0 3 742 258 32 0 0 chrX 20698531 20698562 -145951734 + (GGAGAA)n Simple_repeat Simple_repeat 1 31 0 3 742 2379 230 11 7 chrX 20700606 20701070 -145949226 + Lx6 LINE L1 6995 7460 0 3 742 1716 239 84 43 chrX 20701084 20701330 -145948966 - L1_Rod LINE L1 -3909 1938 1665 3 742 2686 36 20 0 chrX 20701330 20701636 -145948660 - L1Md_F3 LINE L1 -14 6570 6259 3 742 1716 239 84 43 chrX 20701636 20701668 -145948628 - L1_Rod LINE L1 -4183 1664 1630 3 742 4833 76 7 0 chrX 20701668 20702248 -145948048 - MT2B2 LTR ERVL 0 584 1 3 742 1716 239 84 43 chrX 20702248 20702624 -145947672 - L1_Rod LINE L1 -4218 1629 1256 3 742 298 320 101 39 chrX 20702610 20702867 -145947429 - L1_Rod LINE L1 -6820 788 516 3 742 252 0 0 0 chrX 20702881 20702909 -145947387 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 3 742 817 184 0 0 chrX 20702956 20703103 -145947193 - L1_Mur2 LINE L1 -1774 4103 3957 3 742 7025 184 46 9 chrX 20703102 20704464 -145945832 + Lx5 LINE L1 5639 7050 0 3 742 729 246 50 16 chrX 20704537 20704719 -145945577 - B3A SINE B2 -10 188 1 3 742 392 37 0 18 chrX 20705080 20705135 -145945161 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 742 2757 223 90 40 chrX 20705657 20705693 -145944603 - Lx6 LINE L1 -665 6795 6771 3 742 6157 139 28 3 chrX 20705693 20706660 -145943636 - Lx2 LINE L1 -7 6990 6000 3 742 2757 223 90 40 chrX 20706660 20707355 -145942941 - Lx6 LINE L1 -690 6770 6027 3 742 6508 97 8 3 chrX 20707543 20709252 -145941044 + L1VL2 LINE L1 109 1826 -1789 3 743 207 0 0 0 chrX 20710134 20710157 -145940139 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 743 28 0 0 0 chrX 20710236 20710264 -145940032 + AT_rich Low_complexity Low_complexity 1 28 0 3 743 953 263 42 15 chrX 20710560 20710594 -145939702 + L1_Mur3 LINE L1 3637 3669 -2211 3 743 276 30 0 0 chrX 20710594 20710627 -145939669 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 743 953 263 42 15 chrX 20710627 20710928 -145939368 + L1_Mur3 LINE L1 3670 3981 -1899 3 743 1959 230 93 33 chrX 20710974 20711511 -145938785 - RLTR20B3 LTR ERVK -7 561 1 3 743 623 193 15 16 chrX 20711511 20711646 -145938650 + L1_Rod LINE L1 4843 5017 -869 3 743 1785 170 215 15 chrX 20711650 20711924 -145938372 - L1_Mur3 LINE L1 -2745 3135 2806 3 743 3732 50 22 18 chrX 20711924 20712375 -145937921 - L1Md_F2 LINE L1 0 6582 6130 3 743 1785 170 215 15 chrX 20712375 20712621 -145937675 - L1_Mur3 LINE L1 -3075 2805 2511 3 743 2782 114 45 5 chrX 20712621 20713043 -145937253 - BGLII_B LTR ERVK 0 441 3 3 743 4051 192 115 39 chrX 20713067 20715143 -145935153 - MYSERV16_I-int LTR ERVK -45 2281 48 3 743 8725 157 52 24 chrX 20715128 20715494 -145934802 + RMER16-int LTR ERVK 2485 2860 -2546 3 743 246 62 0 0 chrX 20715494 20715526 -145934770 + (TA)n Simple_repeat Simple_repeat 1 32 0 3 743 8725 157 52 24 chrX 20715526 20716799 -145933497 + RMER16-int LTR ERVK 2861 4169 -1237 3 743 598 248 77 135 chrX 20716813 20717162 -145933134 + ETnERV2-int LTR ERVK 6097 6425 -981 3 743 459 92 0 0 chrX 20717170 20717235 -145933061 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 3 743 496 268 71 5 chrX 20718180 20718364 -145931932 - L1MC3 LINE L1 -273 7512 7317 3 743 195 42 0 0 chrX 20718415 20718439 -145931857 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 743 484 214 29 0 chrX 20718471 20718574 -145931722 - RMER19B LTR ERVK -795 107 2 3 743 4028 65 0 14 chrX 20718695 20718718 -145931578 + L1_Mus1 LINE L1 6092 6110 -457 3 743 2006 141 16 47 chrX 20718718 20719037 -145931259 - RLTR27 LTR ERVK 0 309 1 3 743 4028 65 0 14 chrX 20719037 20719495 -145930801 + L1_Mus1 LINE L1 6111 6566 -1 3 743 2188 228 35 52 chrX 20719512 20720150 -145930146 - L1VL4 LINE L1 -5483 819 193 3 743 3997 254 31 13 chrX 20720151 20721234 -145929062 - MurERV4-int LTR ERVK -1296 3964 2862 3 743 8365 144 20 7 chrX 20721253 20722505 -145927791 - Lx4A LINE L1 -3 7055 5788 3 743 4510 148 25 8 chrX 20722524 20723280 -145927016 - Lx LINE L1 -3 6651 5883 3 743 3081 55 10 0 chrX 20723281 20723665 -145926631 - RLTR10 LTR ERVK -2 388 1 3 743 1114 29 0 0 chrX 20723665 20723803 -145926493 - RLTR10-int LTR ERVK -1 1986 1849 3 743 447 110 0 47 chrX 20724759 20724845 -145925451 + RLTR10-int LTR ERVK 74 155 -6387 3 743 3182 60 5 0 chrX 20724820 20725234 -145925062 + RLTR10-int LTR ERVK 553 968 -1019 3 743 4446 24 11 26 chrX 20725223 20725790 -145924506 + RLTR10-int LTR ERVK 1429 1986 -1 3 743 666 37 0 0 chrX 20725790 20725872 -145924424 + RLTR10 LTR ERVK 1 82 -308 3 743 10007 175 37 8 chrX 20725878 20727997 -145922299 - L1_Mm LINE L1 0 5883 3702 3 743 8284 91 28 9 chrX 20727998 20729202 -145921094 - Lx3_Mus LINE L1 0 7009 5783 3 743 3017 26 0 3 chrX 20729268 20729615 -145920681 - ORR1A0 LTR MaLR 0 346 1 3 743 12973 55 13 31 chrX 20729615 20731080 -145919216 - ORR1A0-int LTR MaLR 0 1792 372 3 743 2413 44 3 0 chrX 20731080 20731373 -145918923 - L1Md_F2 LINE L1 -12 6570 6277 3 743 12973 55 13 31 chrX 20731373 20731732 -145918564 - ORR1A0-int LTR MaLR -1421 371 1 3 743 1699 34 0 0 chrX 20731732 20731938 -145918358 - ORR1A0 LTR MaLR 0 346 141 3 743 26790 89 69 11 chrX 20731939 20733637 -145916659 - L1_Mur1 LINE L1 -89 5797 4113 3 743 5954 73 15 4 chrX 20733637 20734431 -145915865 - L1_Mus2 LINE L1 0 6566 5764 3 743 26790 112 76 17 chrX 20734431 20737959 -145912337 - L1_Mur1 LINE L1 -1774 4112 6 3 743 456 149 53 0 chrX 20737959 20738053 -145912243 - L1M4 LINE L1 -2390 3756 3658 3 743 14793 102 13 9 chrX 20738054 20738814 -145911482 - L1Md_F LINE L1 -282 3630 2855 3 743 3199 66 0 5 chrX 20738814 20739223 -145911073 - L1Md_F2 LINE L1 -6 6576 6170 3 743 14793 125 12 50 chrX 20739223 20741464 -145908832 - L1Md_F LINE L1 -1058 2854 723 3 743 388 241 52 15 chrX 20741472 20741607 -145908689 - L1Md_F LINE L1 -5813 801 662 3 743 258 318 18 9 chrX 20741886 20741997 -145908299 - Lx8 LINE L1 -655 6818 6707 3 743 196 53 53 0 chrX 20742189 20742227 -145908069 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 3 743 387 0 0 0 chrX 20742259 20742302 -145907994 + (TAA)n Simple_repeat Simple_repeat 2 44 0 3 743 882 155 0 24 chrX 20742391 20742556 -145907740 - L1Md_F2 LINE L1 0 6582 6422 3 743 764 320 28 41 chrX 20743662 20743952 -145906344 - Lx7 LINE L1 -992 6704 6419 3 743 220 270 100 11 chrX 20744176 20744266 -145906030 + MIRb SINE MIR 47 144 -124 3 743 213 64 128 0 chrX 20744361 20744408 -145905888 + A-rich Low_complexity Low_complexity 3 55 0 3 743 280 288 17 0 chrX 20745167 20745226 -145905070 - ID4 SINE ID -3 80 21 3 743 298 127 28 0 chrX 20745739 20745810 -145904486 + CT-rich Low_complexity Low_complexity 2 74 0 3 743 773 233 56 65 chrX 20746237 20746453 -145903843 + B3A SINE B2 3 216 0 3 743 363 23 0 0 chrX 20746468 20746512 -145903784 + (CAGA)n Simple_repeat Simple_repeat 1 44 0 3 743 4346 88 77 14 chrX 20747334 20748027 -145902269 + RMER17A LTR ERVK 1 736 -15 3 743 228 281 17 34 chrX 20749920 20749979 -145900317 - ID4_ SINE ID -9 74 17 3 743 228 326 11 0 chrX 20750174 20750269 -145900027 + A-rich Low_complexity Low_complexity 4 99 0 3 743 327 191 0 0 chrX 20751221 20751289 -145899007 + C-rich Low_complexity Low_complexity 4 71 0 3 743 197 119 24 0 chrX 20751953 20751995 -145898301 + (CAAA)n Simple_repeat Simple_repeat 4 46 0 3 743 247 42 0 78 chrX 20752427 20752478 -145897818 + (TCTG)n Simple_repeat Simple_repeat 4 50 0 3 743 660 127 67 7 chrX 20752534 20752669 -145897627 - Lx3_Mus LINE L1 -8 7001 6859 3 743 898 98 65 0 chrX 20753082 20753235 -145897061 + Lx3_Mus LINE L1 6838 7000 -9 3 743 227 210 48 16 chrX 20753301 20753364 -145896932 + L1MA5A LINE L1 5901 5965 -332 3 743 289 261 0 28 chrX 20754360 20754431 -145895865 + ID4_ SINE ID 1 69 -14 3 743 292 333 23 0 chrX 20754598 20754685 -145895611 + PB1D10 SINE Alu 1 89 -28 3 743 357 62 0 0 chrX 20755356 20755404 -145894892 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 743 8372 180 40 5 chrX 20756930 20759743 -145890553 - Lx5 LINE L1 -1 7049 4121 3 743 2007 145 0 15 chrX 20759767 20760109 -145890187 - Lx LINE L1 -7 6647 6311 3 743 2579 107 2 73 chrX 20760133 20760557 -145889739 - L1Md_F3 LINE L1 -16 6568 6175 3 743 1492 198 23 3 chrX 20760935 20761261 -145889035 - Lx2 LINE L1 -408 6565 6233 3 743 6625 140 11 4 chrX 20761271 20763006 -145887290 + L1_Mus4 LINE L1 4884 6633 -3 4 743 17943 159 13 26 chrX 20763019 20763556 -145886740 - L1_Mm LINE L1 -949 4934 4443 4 743 1494 53 21 0 chrX 20763556 20763744 -145886552 - B2_Mm1t SINE B2 -1 192 1 4 743 17943 159 13 26 chrX 20763744 20765297 -145884999 - L1_Mm LINE L1 -1441 4442 2889 4 743 1009 123 6 6 chrX 20765297 20765468 -145884828 + (TTCC)n Simple_repeat Simple_repeat 2 172 0 4 743 17943 159 13 26 chrX 20765468 20765493 -145884803 - L1_Mm LINE L1 -2995 2888 2867 4 743 387 0 0 0 chrX 20765493 20765536 -145884760 + (TTCC)n Simple_repeat Simple_repeat 3 45 0 4 743 17943 159 13 26 chrX 20765536 20766712 -145883584 - L1_Mm LINE L1 -3017 2866 1697 4 743 1219 61 0 0 chrX 20766712 20766859 -145883437 - B1_Mus2 SINE Alu 0 147 1 4 743 17943 159 13 26 chrX 20766859 20767282 -145883014 - L1_Mm LINE L1 -4187 1696 1267 4 743 3663 142 11 13 chrX 20767326 20767941 -145882355 - L1_Mus4 LINE L1 -3 6633 6020 4 743 3673 93 29 2 chrX 20767941 20768216 -145882080 - L1_Mus3 LINE L1 -488 6150 5876 4 743 336 24 0 0 chrX 20768216 20768257 -145882039 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 743 4652 139 12 4 chrX 20768257 20769131 -145881165 - L1_Mus3 LINE L1 -763 5875 4985 4 743 31640 86 11 8 chrX 20769128 20775280 -145875016 - L1Md_F2 LINE L1 -10 6572 400 4 743 2776 118 223 0 chrX 20775843 20776319 -145873977 - MT2B2 LTR ERVL -2 582 1 4 743 894 232 52 34 chrX 20776904 20777172 -145873124 - BGLII_B LTR ERVK -2 439 167 4 743 560 202 29 0 chrX 20777229 20777333 -145872963 - B3 SINE B2 -108 108 2 4 743 493 286 63 100 chrX 20777359 20777818 -145872478 - L1_Mur3 LINE L1 -6400 1312 871 4 743 2432 311 25 15 chrX 20778033 20778886 -145871410 + Lx7 LINE L1 6433 7293 -403 4 743 289 146 0 35 chrX 20778898 20778955 -145871341 + Lx7 LINE L1 7627 7681 -15 4 743 1045 290 90 12 chrX 20779088 20779500 -145870796 + Lx9 LINE L1 6860 7303 -341 4 743 360 0 0 0 chrX 20779686 20779726 -145870570 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 743 360 133 0 0 chrX 20779768 20779828 -145870468 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 743 295 262 25 12 chrX 20779897 20779978 -145870318 - ID4_ SINE ID 0 83 2 4 743 3239 75 5 10 chrX 20780086 20780488 -145869808 - MTB LTR MaLR 0 400 1 4 743 6053 123 30 77 chrX 20780488 20780667 -145869629 - MTB-int LTR MaLR 0 1098 926 4 743 4763 68 19 7 chrX 20780667 20781255 -145869041 - L1Md_F2 LINE L1 -1 6581 5987 4 743 6053 123 30 77 chrX 20781255 20782227 -145868069 - MTB-int LTR MaLR -173 925 3 4 743 2882 91 44 13 chrX 20782227 20782615 -145867681 - MTB LTR MaLR 0 400 1 4 743 347 304 123 5 chrX 20782769 20782964 -145867332 + L1M5 LINE L1 5606 5823 -356 4 743 851 103 0 6 chrX 20783464 20783620 -145866676 + (CA)n Simple_repeat Simple_repeat 1 155 0 4 743 201 39 0 0 chrX 20784596 20784622 -145865674 + (TTGTG)n Simple_repeat Simple_repeat 4 29 0 4 743 963 147 0 0 chrX 20784832 20784995 -145865301 + (TTC)n Simple_repeat Simple_repeat 2 164 0 4 743 691 131 8 90 chrX 20784995 20785129 -145865167 - B1_Mus2 SINE Alu -10 137 15 4 743 311 131 0 32 chrX 20785920 20785983 -145864313 - B1_Mur3 SINE Alu 0 149 89 4 743 444 62 0 0 chrX 20785983 20786047 -145864249 + (TCTCTG)n Simple_repeat Simple_repeat 2 65 0 4 743 457 210 0 0 chrX 20786049 20786141 -145864155 - B1_Mm SINE Alu -51 96 5 4 743 269 219 0 24 chrX 20786415 20786490 -145863806 + Lx9 LINE L1 5834 5941 -359 4 743 1361 127 24 0 chrX 20786620 20786832 -145863464 - ORR1A2 LTR MaLR -110 217 1 4 743 200 371 60 15 chrX 20787061 20787195 -145863101 + L2a LINE L2 3044 3183 -243 4 743 622 259 7 21 chrX 20787201 20787343 -145862953 + B1_Mur4 SINE Alu 2 141 -9 4 743 192 40 0 0 chrX 20787363 20787388 -145862908 + (CAA)n Simple_repeat Simple_repeat 3 27 0 4 743 3759 215 51 8 chrX 20787402 20788279 -145862017 + Lx9 LINE L1 6725 7639 -5 4 743 1174 191 84 50 chrX 20789336 20789633 -145860663 - Lx6 LINE L1 -1 7459 7153 4 743 454 237 91 28 chrX 20789635 20789778 -145860518 - Lx6 LINE L1 -421 7039 6888 4 743 277 280 13 0 chrX 20790580 20790655 -145859641 - ID4 SINE ID -6 77 2 4 743 381 348 41 43 chrX 20791545 20792052 -145858244 + Lx9 LINE L1 7074 7579 -65 4 743 393 269 50 36 chrX 20792281 20792420 -145857876 - B1F SINE Alu -4 145 5 4 743 191 132 12 95 chrX 20794607 20794691 -145855605 + T-rich Low_complexity Low_complexity 1 77 0 4 743 221 188 29 0 chrX 20794727 20794796 -145855500 + CT-rich Low_complexity Low_complexity 3 73 0 4 743 555 209 26 0 chrX 20794806 20794921 -145855375 - B1_Mur4 SINE Alu 0 150 33 4 743 1610 302 60 7 chrX 20796423 20796976 -145853320 + Lx6 LINE L1 6852 7433 -27 4 743 299 361 36 49 chrX 20797348 20797654 -145852642 - MLT1E2 LTR MaLR -3 624 323 4 743 343 278 120 0 chrX 20797929 20798037 -145852259 - B1_Mur2 SINE Alu 0 149 29 4 743 612 38 0 0 chrX 20799199 20799278 -145851018 + (TG)n Simple_repeat Simple_repeat 1 79 0 4 743 683 267 24 24 chrX 20799278 20799485 -145850811 - ID_B1 SINE B4 -17 207 1 4 743 214 114 91 0 chrX 20801688 20801732 -145848564 + (TCTCTG)n Simple_repeat Simple_repeat 5 52 0 4 743 985 320 142 25 chrX 20802072 20802899 -145847397 + L1_Mur3 LINE L1 65 987 -6741 4 743 1798 253 75 96 chrX 20802915 20803913 -145846383 - RMER17B LTR ERVK -11 897 2 4 743 1752 206 48 3 chrX 20803925 20804537 -145845759 + L1_Mur3 LINE L1 984 1618 -4262 4 743 7429 116 18 2 chrX 20804593 20806395 -145843901 - L1_Mus3 LINE L1 -7 6631 4801 4 743 368 61 0 0 chrX 20806388 20806437 -145843859 - L1Md_F LINE L1 -5628 891 843 4 743 7857 54 2 0 chrX 20806438 20807388 -145842908 - L1Md_F2 LINE L1 -12 6570 5619 4 743 6733 119 2 42 chrX 20807383 20808918 -145841378 - L1Md_F LINE L1 -3695 2188 725 4 743 392 280 15 8 chrX 20808926 20809059 -145841237 - L1Md_F LINE L1 -5813 803 670 4 743 398 283 0 143 chrX 20809135 20809296 -145841000 - L1VL1 LINE L1 -6065 357 220 4 743 558 242 7 0 chrX 20809411 20809560 -145840736 + MYSERV16_I-int LTR ERVK 2102 2251 -75 4 743 800 341 45 53 chrX 20809619 20809825 -145840471 + RLTR20B1 LTR ERVK 3 203 -360 4 743 246 32 0 0 chrX 20809825 20809856 -145840440 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 743 800 341 45 53 chrX 20809856 20810008 -145840288 + RLTR20B1 LTR ERVK 204 358 -205 4 743 1230 236 35 63 chrX 20811548 20811914 -145838382 - RMER6B LTR ERVK -1 460 105 4 743 1172 187 35 9 chrX 20811917 20812144 -145838152 + Lx4A LINE L1 6443 6675 -383 4 743 1386 19 0 0 chrX 20812144 20812304 -145837992 + B2_Mm1a SINE B2 1 160 -33 4 743 414 0 0 0 chrX 20812304 20812350 -145837946 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 4 743 1383 199 19 0 chrX 20812354 20812610 -145837686 + Lx4A LINE L1 6669 6929 -129 4 743 2531 194 23 4 chrX 20812612 20813131 -145837165 - MYSERV6-int LTR ERVK -6918 2041 1513 4 743 522 210 8 8 chrX 20813139 20813259 -145837037 - MYSERV6-int LTR ERVK -7608 1351 1232 4 743 22 80 0 0 chrX 20813263 20813313 -145836983 + AT_rich Low_complexity Low_complexity 1 50 0 4 743 195 69 0 0 chrX 20813315 20813344 -145836952 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 4 743 519 230 50 7 chrX 20813746 20813886 -145836410 - Lx9 LINE L1 -214 7430 7285 4 743 12953 23 0 0 chrX 20813915 20816071 -145834225 - L1Md_T LINE L1 0 6582 4427 4 743 39032 47 0 3 chrX 20816068 20823192 -145827104 - L1Md_T LINE L1 0 6585 1 4 743 4057 200 34 12 chrX 20823193 20824042 -145826254 - MYSERV6-int LTR ERVK -7716 1243 376 4 743 23 0 0 0 chrX 20824173 20824196 -145826100 + AT_rich Low_complexity Low_complexity 1 23 0 4 743 279 133 0 0 chrX 20824617 20824662 -145825634 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 743 956 256 117 56 chrX 20825069 20825259 -145825037 - BGLII_B LTR ERVK -1 440 228 4 743 315 0 0 0 chrX 20825259 20825294 -145825002 + (TCTCCC)n Simple_repeat Simple_repeat 3 37 0 4 743 956 256 117 56 chrX 20825294 20825513 -145824783 - BGLII_B LTR ERVK -214 227 6 4 743 210 37 0 0 chrX 20826122 20826149 -145824147 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 743 1092 84 14 0 chrX 20826149 20826283 -145824013 - B1_Mus1 SINE Alu -10 138 3 4 743 238 0 0 75 chrX 20828584 20828624 -145821672 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 4 743 454 0 0 0 chrX 20828629 20828682 -145821614 + B1_Mur4 SINE Alu 88 140 -10 4 743 450 0 0 0 chrX 20828682 20828732 -145821564 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 4 743 333 0 0 0 chrX 20829453 20829490 -145820806 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 743 459 0 0 0 chrX 20829490 20829540 -145820756 + (GA)n Simple_repeat Simple_repeat 2 52 0 4 743 206 116 23 0 chrX 20830081 20830124 -145820172 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 4 743 482 83 0 14 chrX 20831076 20831149 -145819147 + (TA)n Simple_repeat Simple_repeat 1 72 0 4 743 39915 65 1 22 chrX 20831755 20838890 -145811406 - L1Md_T LINE L1 0 6582 99 4 743 23 54 0 0 chrX 20839130 20839167 -145811129 + AT_rich Low_complexity Low_complexity 1 37 0 4 92 6577 160 53 8 chrX 20839837 20840977 -145809319 - Lx3B LINE L1 0 6973 5783 4 744 13578 146 60 57 chrX 20840978 20842436 -145807860 - L1_Mus2 LINE L1 0 6566 5157 4 744 1210 95 0 0 chrX 20842436 20842583 -145807713 - B1_Mus2 SINE Alu 0 147 1 4 744 13578 178 7 39 chrX 20842583 20844506 -145805790 - L1_Mus2 LINE L1 -721 5156 3244 4 744 2824 132 16 5 chrX 20845513 20845961 -145804335 - L1VL4 LINE L1 -825 2734 2282 4 744 35689 70 10 18 chrX 20845959 20852082 -145798214 - L1Md_F2 LINE L1 0 6582 511 4 744 8854 140 15 14 chrX 20852084 20854169 -145796127 - L1VL4 LINE L1 -1266 2293 207 4 744 1201 82 0 7 chrX 20854383 20854531 -145795765 + B1_Mus2 SINE Alu 1 147 0 4 744 387 0 0 0 chrX 20855149 20855192 -145795104 + (TC)n Simple_repeat Simple_repeat 2 44 0 4 744 225 0 0 0 chrX 20855192 20855216 -145795080 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 744 198 71 0 0 chrX 20857514 20857542 -145792754 + (TAA)n Simple_repeat Simple_repeat 2 29 0 4 744 204 122 0 0 chrX 20857866 20857907 -145792389 + (T)n Simple_repeat Simple_repeat 1 41 0 4 744 238 233 0 27 chrX 20858265 20858340 -145791956 + A-rich Low_complexity Low_complexity 6 78 0 4 744 1624 57 5 19 chrX 20858373 20858586 -145791710 + L1Md_F3 LINE L1 6361 6570 -14 4 744 7260 73 2 1 chrX 20858749 20859671 -145790625 + L1_Mus1 LINE L1 5645 6567 0 4 744 207 264 0 52 chrX 20860371 20860467 -145789829 + (TTTG)n Simple_repeat Simple_repeat 4 94 0 4 744 3410 44 5 16 chrX 20861175 20861610 -145788686 - L1Md_F2 LINE L1 -39 6543 6114 4 744 313 93 37 0 chrX 20861610 20861664 -145788632 + L1Md_F2 LINE L1 6521 6576 -6 4 744 23 0 0 0 chrX 20862300 20862323 -145787973 + AT_rich Low_complexity Low_complexity 1 23 0 4 744 610 191 16 0 chrX 20862324 20862450 -145787846 - Lx3A LINE L1 -7 6974 6847 4 744 2210 227 45 12 chrX 20862623 20863140 -145787156 + Lx2B LINE L1 6464 6997 -3 5 744 1586 123 60 4 chrX 20863152 20863404 -145786892 + L1VL1 LINE L1 1 266 -6156 5 744 2120 64 25 0 chrX 20863407 20863687 -145786609 + MTA_Mm LTR MaLR 110 396 0 5 744 522 0 0 0 chrX 20864214 20864272 -145786024 + (GA)n Simple_repeat Simple_repeat 2 59 0 5 744 659 65 0 11 chrX 20864272 20864366 -145785930 + (GAA)n Simple_repeat Simple_repeat 3 95 0 5 744 253 100 40 0 chrX 20864423 20864473 -145785823 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 744 1105 213 40 22 chrX 20865105 20865399 -145784897 - L1_Rod LINE L1 -2023 4123 3799 5 744 768 244 25 46 chrX 20865503 20865744 -145784552 - L1_Rod LINE L1 -231 5616 5381 5 744 1891 158 60 79 chrX 20865744 20866231 -145784065 + RLTR31A_Mm LTR ERVK 11 557 0 5 744 649 305 19 34 chrX 20866236 20866443 -145783853 - RodERV21-int LTR ERV1 -3520 1471 1268 5 744 255 206 14 14 chrX 20866820 20866889 -145783407 - Lx9 LINE L1 -47 7597 7529 5 744 600 246 61 38 chrX 20866882 20867110 -145783186 - L1_Rod LINE L1 -824 5319 5018 5 744 2345 148 2 121 chrX 20867110 20867269 -145783027 - RLTR14 LTR ERV1 0 382 239 5 744 1291 48 0 0 chrX 20867269 20867415 -145782881 + B1_Mus1 SINE Alu 2 147 -1 5 744 2345 148 2 121 chrX 20867415 20867686 -145782610 - RLTR14 LTR ERV1 -144 238 3 5 744 502 176 66 0 chrX 20867706 20867797 -145782499 - RLTR14-int LTR ERV1 -1 5316 5220 5 744 12797 176 65 27 chrX 20867820 20869506 -145780790 - RLTR14-int LTR ERV1 -205 5112 3356 5 744 1193 82 0 0 chrX 20869506 20869652 -145780644 - B1_Mm SINE Alu 0 147 2 5 744 12797 176 65 27 chrX 20869652 20870554 -145779742 - RLTR14-int LTR ERV1 -1962 3355 2428 5 744 2322 230 84 55 chrX 20871943 20872724 -145777572 + RLTR40 LTR ERVK 3 806 -11 5 744 396 0 0 0 chrX 20872875 20872919 -145777377 + (TAA)n Simple_repeat Simple_repeat 2 45 0 5 744 3204 180 132 30 chrX 20873586 20874480 -145775816 - RMER17B LTR ERVK 0 958 1 5 744 3673 110 90 2 chrX 20875147 20875667 -145774629 + RMER2 LTR ERV1 2 567 0 5 744 711 223 46 0 chrX 20875922 20876097 -145774199 - Lx9 LINE L1 -245 7399 7217 5 744 519 155 9 28 chrX 20876097 20876203 -145774093 + Lx9 LINE L1 7540 7643 -1 5 744 673 178 276 0 chrX 20876206 20876380 -145773916 + Lx5 LINE L1 6825 7046 -4 5 744 906 153 14 7 chrX 20876412 20876557 -145773739 + B1_Mur4 SINE Alu 5 150 0 5 744 743 189 6 38 chrX 20876577 20876736 -145773560 + Lx4B LINE L1 6800 6953 -105 5 744 1198 42 14 34 chrX 20877035 20877047 -145773249 - B1_Mus1 SINE Alu -2 146 139 5 744 203 0 0 36 chrX 20877047 20877075 -145773221 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 5 744 1198 42 14 34 chrX 20877075 20877210 -145773086 - B1_Mus1 SINE Alu -10 138 2 5 744 3242 131 37 39 chrX 20877847 20878545 -145771751 + RLTR13D3 LTR ERVK 301 1114 0 5 744 210 250 0 51 chrX 20879140 20879199 -145771097 + CT-rich Low_complexity Low_complexity 4 59 0 5 744 4198 93 11 2 chrX 20880595 20881142 -145769154 - L1_Mus3 LINE L1 -1 6637 6086 5 744 3283 96 9 0 chrX 20881741 20882188 -145768108 + MT2B2 LTR ERVL 1 451 -133 5 744 1106 129 12 0 chrX 20882185 20882355 -145767941 - B2_Mm2 SINE B2 -22 173 2 5 744 944 128 0 0 chrX 20882378 20882519 -145767777 - B2_Mm2 SINE B2 -53 142 2 5 744 1033 144 37 42 chrX 20882519 20882658 -145767638 + MT2B2 LTR ERVL 447 584 0 5 744 626 0 14 0 chrX 20883118 20883192 -145767104 + (TCTA)n Simple_repeat Simple_repeat 2 76 0 5 744 219 253 0 0 chrX 20883857 20883936 -145766360 + CT-rich Low_complexity Low_complexity 1 79 0 5 744 203 88 29 0 chrX 20886064 20886098 -145764198 + (TTCC)n Simple_repeat Simple_repeat 1 35 0 5 744 396 0 0 0 chrX 20887472 20887516 -145762780 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 744 3103 71 36 8 chrX 20888289 20888673 -145761623 + MTA_Mm LTR MaLR 1 395 -1 5 744 216 0 0 0 chrX 20888800 20888824 -145761472 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 744 486 118 0 0 chrX 20888824 20888917 -145761379 + (GA)n Simple_repeat Simple_repeat 2 94 0 5 744 252 0 0 0 chrX 20890089 20890117 -145760179 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 5 744 827 138 0 55 chrX 20890117 20890263 -145760033 - B1_Mus1 SINE Alu -3 145 8 5 744 293 43 0 42 chrX 20890473 20890521 -145759775 + (TTTTTG)n Simple_repeat Simple_repeat 1 46 0 5 744 247 200 0 0 chrX 20891382 20891437 -145758859 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 744 214 227 15 29 chrX 20892544 20892612 -145757684 + CT-rich Low_complexity Low_complexity 3 69 0 5 744 411 171 0 0 chrX 20893229 20893305 -145756991 + (TA)n Simple_repeat Simple_repeat 1 76 0 5 744 4182 179 43 8 chrX 20893462 20894224 -145756072 - Lx LINE L1 -6 6648 5860 5 744 208 269 0 0 chrX 20894430 20894482 -145755814 + CT-rich Low_complexity Low_complexity 3 54 0 5 744 242 29 29 0 chrX 20894620 20894655 -145755641 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 744 414 0 0 0 chrX 20894655 20894700 -145755596 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 744 446 129 0 12 chrX 20897144 20897230 -145753066 + (TA)n Simple_repeat Simple_repeat 1 85 0 5 744 3351 40 0 31 chrX 20899253 20899668 -145750628 - L1Md_F3 LINE L1 -14 6570 6169 5 744 1121 75 0 7 chrX 20899685 20899833 -145750463 - B1_Mm SINE Alu 0 147 1 5 744 749 168 0 21 chrX 20900215 20900355 -145749941 - B1_Mur3 SINE Alu -1 148 12 5 744 376 192 18 116 chrX 20900264 20900376 -145749920 - MT2B LTR ERVL -346 255 155 5 744 364 267 51 97 chrX 20900376 20900403 -145749893 - B4A SINE B4 -61 199 46 5 744 327 49 0 0 chrX 20900966 20901007 -145749289 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 744 1700 179 46 15 chrX 20902027 20902356 -145747940 - MTC LTR MaLR 0 421 83 5 744 422 36 18 0 chrX 20902365 20902421 -145747875 + (TC)n Simple_repeat Simple_repeat 1 57 0 5 744 297 219 60 17 chrX 20902422 20902443 -145747853 - Lx2B LINE L1 -4 6996 6974 5 744 612 62 0 0 chrX 20902443 20902524 -145747772 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 5 744 431 151 179 0 chrX 20902524 20902630 -145747666 - Lx4B LINE L1 -17 7041 6917 5 744 438 185 0 0 chrX 20902630 20902711 -145747585 - MTC LTR MaLR -340 81 1 5 744 232 290 9 43 chrX 20902905 20903063 -145747233 + GA-rich Low_complexity Low_complexity 1 152 0 5 744 445 174 63 27 chrX 20903849 20903927 -145746369 - MT2B2 LTR ERVL -56 545 447 5 744 818 135 0 47 chrX 20903927 20904075 -145746221 + B2_Mm2 SINE B2 2 142 -53 5 744 984 123 7 0 chrX 20904098 20904253 -145746043 + B2_Mm2 SINE B2 2 157 -38 5 744 230 0 33 0 chrX 20904253 20904283 -145746013 + (TAA)n Simple_repeat Simple_repeat 3 33 0 5 744 3053 101 9 0 chrX 20904283 20904729 -145745567 - MT2B2 LTR ERVL -134 450 1 5 744 477 50 0 0 chrX 20907387 20907447 -145742849 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 744 241 89 44 0 chrX 20908736 20908781 -145741515 + (GGAA)n Simple_repeat Simple_repeat 1 47 0 5 744 240 35 0 0 chrX 20909944 20909973 -145740323 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 744 1184 153 9 13 chrX 20912427 20912652 -145737644 + MTB_Mm LTR MaLR 1 224 -183 5 744 661 266 92 5 chrX 20913040 20913225 -145737071 - Lx8 LINE L1 -361 7112 6912 5 744 337 209 242 0 chrX 20913797 20913888 -145736408 - Lx8 LINE L1 -567 6906 6794 5 744 443 290 75 27 chrX 20914423 20914611 -145735685 - B3A SINE B2 0 198 2 5 744 261 0 0 0 chrX 20914617 20914646 -145735650 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 5 744 607 134 8 48 chrX 20914646 20914771 -145735525 - RLTR30 LTR ERV1 -57 322 203 5 744 895 245 29 14 chrX 20914810 20915017 -145735279 - RLTR30 LTR ERV1 -169 210 1 5 744 751 260 171 12 chrX 20915025 20915270 -145735026 + B4A SINE B4 2 285 -7 5 744 378 0 0 0 chrX 20915291 20915333 -145734963 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 744 500 281 91 28 chrX 20915569 20915584 -145734712 - B3 SINE B2 -10 206 196 5 744 1570 28 22 0 chrX 20915584 20915766 -145734530 - B2_Mm1a SINE B2 -6 187 2 5 744 500 281 91 28 chrX 20915766 20915926 -145734370 - B3 SINE B2 -21 195 20 5 744 661 312 45 30 chrX 20916600 20916864 -145733432 + B4A SINE B4 2 269 -23 5 744 34 42 0 0 chrX 20917010 20917058 -145733238 + AT_rich Low_complexity Low_complexity 1 48 0 5 744 427 247 30 18 chrX 20917095 20917260 -145733036 - L1MA7 LINE L1 0 6291 6125 5 744 562 228 0 30 chrX 20917260 20917391 -145732905 + RSINE1 SINE B4 3 129 -36 5 744 1228 130 11 0 chrX 20917440 20917617 -145732679 + B2_Mm1t SINE B2 1 179 -14 5 744 1439 104 91 42 chrX 20917617 20917692 -145732604 - L1Md_F2 LINE L1 -5 6577 6505 5 744 183 80 0 0 chrX 20917692 20917717 -145732579 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 5 744 1439 104 91 42 chrX 20917717 20917882 -145732414 - L1Md_F2 LINE L1 -78 6504 6326 5 744 347 206 117 10 chrX 20918335 20918438 -145731858 - L1MA7 LINE L1 -379 5921 5808 5 744 454 243 60 7 chrX 20918430 20918579 -145731717 - L1M3 LINE L1 -2005 4135 3979 5 744 588 273 69 5 chrX 20919306 20919481 -145730815 - B3A SINE B2 -32 184 4 5 744 641 179 104 0 chrX 20919622 20919756 -145730540 - B1_Mur4 SINE Alu 0 150 3 5 744 622 278 120 8 chrX 20920010 20920260 -145730036 + B4A SINE B4 4 281 -11 5 744 258 307 29 38 chrX 20920702 20920807 -145729489 - PB1D10 SINE Alu -13 104 1 5 744 301 269 26 69 chrX 20920891 20921007 -145729289 - PB1 SINE Alu -11 116 6 5 744 626 200 87 17 chrX 20921857 20922030 -145728266 + Lx6 LINE L1 7275 7459 -1 5 744 297 289 65 10 chrX 20922675 20922789 -145727507 + PB1D10 SINE Alu 7 122 -27 5 744 420 193 80 0 chrX 20922868 20922956 -145727340 + B1_Mur3 SINE Alu 24 118 -31 5 744 236 228 58 115 chrX 20922956 20922972 -145727324 + MT2B LTR ERVL 188 285 -316 5 744 907 161 33 22 chrX 20922982 20923166 -145727130 + B2_Mm2 SINE B2 2 187 -8 5 744 245 358 0 0 chrX 20923525 20923592 -145726704 - tRNA-Ala-GCY_ tRNA tRNA -8 67 1 5 744 377 197 103 18 chrX 20923720 20923867 -145726429 - B3 SINE B2 0 198 58 5 744 278 200 0 14 chrX 20923981 20924044 -145726252 + CT-rich Low_complexity Low_complexity 12 73 0 5 744 732 23 0 0 chrX 20924044 20924130 -145726166 + (TTTC)n Simple_repeat Simple_repeat 4 89 0 6 744 1259 84 45 0 chrX 20924151 20924330 -145725966 - B2_Mm1a SINE B2 -6 187 1 6 744 1040 123 7 0 chrX 20924331 20924477 -145725819 - B1_Mus2 SINE Alu 0 147 1 6 744 470 248 17 0 chrX 20924481 20924598 -145725698 - L1MA6 LINE L1 -5 6295 6177 6 744 454 369 12 0 chrX 20924622 20924782 -145725514 - RSINE1 SINE B4 -1 164 3 6 744 559 206 29 15 chrX 20924831 20924986 -145725310 - L1MA6 LINE L1 -135 6165 6010 6 744 6576 104 23 7 chrX 20925343 20926299 -145723997 - Lx3A LINE L1 -4 6977 6007 6 744 279 0 0 0 chrX 20926324 20926355 -145723941 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 6 744 736 276 43 0 chrX 20926361 20926546 -145723750 - B3 SINE B2 -19 197 5 6 744 817 138 86 7 chrX 20926870 20927009 -145723287 + B1_Mur4 SINE Alu 1 150 0 6 744 190 95 48 0 chrX 20927010 20927052 -145723244 + (CAAAA)n Simple_repeat Simple_repeat 4 47 0 6 744 758 154 58 14 chrX 20927343 20927481 -145722815 - B1_Mur3 SINE Alu -1 148 5 6 744 561 321 137 32 chrX 20927900 20928215 -145722081 - MLT1A0 LTR MaLR -17 348 1 6 744 746 295 108 26 chrX 20928525 20928904 -145721392 - MLT2B4 LTR ERVL -3 553 144 6 744 711 245 84 35 chrX 20929568 20929771 -145720525 + B3 SINE B2 2 214 -2 6 744 221 294 191 0 chrX 20930340 20930408 -145719888 - ID4 SINE ID -1 82 2 6 744 271 57 0 0 chrX 20930708 20930743 -145719553 - U2 snRNA snRNA -153 35 1 6 744 6398 218 43 24 chrX 20930759 20932191 -145718105 - Lx5 LINE L1 -5 7045 5587 6 744 2827 108 113 12 chrX 20932262 20932741 -145717555 - L1_Mur2 LINE L1 -769 5108 4582 6 744 8549 160 65 59 chrX 20932764 20932879 -145717417 - L1_Mur2 LINE L1 -2751 3126 3023 6 744 4847 88 42 7 chrX 20932879 20933564 -145716732 + Lx2 LINE L1 6288 6996 -1 6 744 8549 154 59 54 chrX 20933564 20935383 -145714913 - L1_Mur2 LINE L1 -2855 3022 1181 6 744 314 250 20 157 chrX 20935380 20935542 -145714754 - L1_Mur2 LINE L1 -6664 1064 922 6 744 207 0 0 0 chrX 20935542 20935565 -145714731 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 744 314 250 20 157 chrX 20935565 20935606 -145714690 - L1_Mur2 LINE L1 -6807 921 889 6 744 180 0 0 0 chrX 20935679 20935699 -145714597 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 744 554 124 21 0 chrX 20935699 20935796 -145714500 + (GGGAGA)n Simple_repeat Simple_repeat 4 102 0 6 744 324 0 0 0 chrX 20936027 20936063 -145714233 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 744 226 269 122 32 chrX 20936083 20936206 -145714090 - L1MA9 LINE L1 0 6312 6179 6 744 606 173 100 0 chrX 20936220 20936330 -145713966 - B1_Mur2 SINE Alu -11 138 18 6 744 236 271 73 77 chrX 20936359 20936441 -145713855 - L1MA9 LINE L1 -155 6157 6067 6 744 860 167 7 20 chrX 20936441 20936588 -145713708 - B1_Mur4 SINE Alu -1 149 5 6 744 236 271 73 77 chrX 20936588 20936725 -145713571 - L1MA9 LINE L1 -246 6066 5940 6 744 493 189 90 0 chrX 20936744 20936855 -145713441 - B3 SINE B2 0 216 96 6 744 706 154 0 23 chrX 20936866 20936999 -145713297 + L1_Mur3 LINE L1 3590 3719 -2158 6 744 2133 160 34 0 chrX 20937545 20937932 -145712364 + L1_Mur3 LINE L1 5008 5407 -473 6 744 222 37 0 0 chrX 20938754 20938781 -145711515 + (CAG)n Simple_repeat Simple_repeat 1 27 0 6 744 264 122 0 0 chrX 20939712 20939753 -145710543 + (GGA)n Simple_repeat Simple_repeat 2 42 0 6 744 26 30 0 0 chrX 20940355 20940388 -145709908 + AT_rich Low_complexity Low_complexity 1 33 0 6 744 348 24 0 0 chrX 20941096 20941137 -145709159 + (TGG)n Simple_repeat Simple_repeat 3 43 0 6 744 470 114 13 0 chrX 20941138 20941217 -145709079 + (GGA)n Simple_repeat Simple_repeat 3 82 0 6 744 22 0 0 0 chrX 20941718 20941740 -145708556 + AT_rich Low_complexity Low_complexity 1 22 0 6 744 1503 200 267 13 chrX 20941756 20942425 -145707871 + Lx6 LINE L1 5394 6225 -1235 6 744 852 102 0 0 chrX 20942437 20942565 -145707731 - RLTR12A LTR ERVK -440 128 1 6 744 3788 189 108 23 chrX 20942567 20942857 -145707439 + Lx6 LINE L1 6603 6918 -542 6 744 459 0 0 0 chrX 20942857 20942908 -145707388 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 744 3788 189 108 23 chrX 20942908 20943404 -145706892 + Lx6 LINE L1 6919 7456 -4 6 744 249 33 0 0 chrX 20943454 20943484 -145706812 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 744 1244 41 7 14 chrX 20943694 20943841 -145706455 - B1_Mm SINE Alu 0 147 2 6 744 877 171 20 46 chrX 20944138 20944334 -145705962 - B2_Mm2 SINE B2 -3 192 2 6 744 225 250 31 0 chrX 20944391 20944455 -145705841 - L1M2 LINE L1 -710 5590 5525 6 744 1110 62 43 18 chrX 20944792 20944955 -145705341 - B2_Mm1t SINE B2 0 193 27 6 744 11641 50 5 2 chrX 20945129 20947238 -145703058 - L1Md_F3 LINE L1 0 6584 4472 6 744 243 0 0 0 chrX 20947780 20947807 -145702489 + (TTC)n Simple_repeat Simple_repeat 2 28 0 6 744 286 247 161 0 chrX 20947815 20947908 -145702388 - PB1D10 SINE Alu -2 115 8 6 744 3971 78 68 4 chrX 20948280 20948807 -145701489 - L1_Mus3 LINE L1 0 6638 6078 6 744 340 290 91 25 chrX 20949051 20949249 -145701047 - L1M5 LINE L1 -1726 4420 4210 6 744 210 37 0 0 chrX 20949283 20949310 -145700986 + (TTG)n Simple_repeat Simple_repeat 2 28 0 6 744 1038 75 0 0 chrX 20949310 20949443 -145700853 - B1_Mus1 SINE Alu -10 138 6 6 744 735 240 107 25 chrX 20949443 20949507 -145700789 - ID_B1 SINE B4 -10 214 2 6 744 256 301 0 11 chrX 20949575 20949670 -145700626 - L1M5 LINE L1 -2006 4140 4047 6 744 1916 177 22 17 chrX 20949679 20950182 -145700114 + RLTR33 LTR ERVK 134 678 0 6 744 380 342 52 26 chrX 20950243 20950435 -145699861 + MTE2a LTR MaLR 4 200 -219 6 744 632 280 0 7 chrX 20950448 20950592 -145699704 + B1F2 SINE Alu 1 143 -6 6 744 188 111 28 0 chrX 20950607 20950643 -145699653 + (CAA)n Simple_repeat Simple_repeat 1 37 0 6 744 625 251 55 69 chrX 20950650 20950868 -145699428 + MTE2a LTR MaLR 197 411 -8 6 744 342 311 22 0 chrX 20950861 20950951 -145699345 - MLT1A0 LTR MaLR -273 92 1 6 744 958 258 101 36 chrX 20950973 20951420 -145698876 - L1MB4 LINE L1 -132 6048 5573 6 744 299 125 0 0 chrX 20951433 20951481 -145698815 - B1_Mm SINE Alu -19 128 81 6 744 979 113 95 6 chrX 20951487 20951656 -145698640 + RMER6C LTR ERVK 41 224 -466 6 744 1292 132 26 15 chrX 20951748 20951999 -145698297 + RMER6C LTR ERVK 456 716 -40 6 744 369 256 0 104 chrX 20951948 20952044 -145698252 - B1_Mur3 SINE Alu -56 93 8 6 744 273 221 0 218 chrX 20951956 20952089 -145698207 - MT2B LTR ERVL -361 240 137 6 744 423 278 48 18 chrX 20952089 20952291 -145698005 - L1MB4 LINE L1 -699 5481 5278 6 744 216 0 0 0 chrX 20952291 20952315 -145697981 + (TA)n Simple_repeat Simple_repeat 2 25 0 6 744 386 268 64 19 chrX 20952315 20952359 -145697937 - L1MB4 LINE L1 -869 5277 5226 6 744 953 116 0 7 chrX 20952375 20952523 -145697773 - URR1B DNA MER1_type 0 225 79 6 744 1262 21 7 0 chrX 20952605 20952745 -145697551 - B1_Mm SINE Alu -5 142 2 6 744 516 261 15 7 chrX 20952776 20952911 -145697385 + L1MA6 LINE L1 4789 4924 -1216 6 744 237 264 19 0 chrX 20953021 20953074 -145697222 + LSU-rRNA_Hsa rRNA rRNA 254 307 -4728 6 744 1152 352 24 30 chrX 20953675 20954425 -145695871 + RLTR4_MM-int LTR ERV1 2632 3392 -4386 6 744 600 337 85 29 chrX 20954426 20954876 -145695420 + RLTR4_MM-int LTR ERV1 3804 4292 -3314 6 744 5366 104 50 8 chrX 20954876 20955632 -145694664 + Lx2 LINE L1 6209 6996 -1 6 744 600 333 92 30 chrX 20955632 20955786 -145694510 + RLTR4_MM-int LTR ERV1 4293 4459 -3147 6 744 1378 306 42 19 chrX 20956119 20956601 -145693695 + MuRRS4-int LTR ERV1 3530 4022 -1041 6 744 1293 231 179 61 chrX 20957309 20957816 -145692480 + RMER2 LTR ERV1 1 567 0 6 744 651 189 152 17 chrX 20957819 20957997 -145692299 + L1MA6 LINE L1 5471 5672 -619 6 744 1997 67 7 18 chrX 20957997 20958270 -145692026 + MTB LTR MaLR 1 270 -130 6 744 3038 37 5 3 chrX 20958263 20958638 -145691658 - MTA_Mm LTR MaLR -20 376 1 6 744 8466 85 5 5 chrX 20958638 20959733 -145690563 - MTA_Mm-int LTR MaLR 0 1098 4 6 744 3374 53 5 2 chrX 20959736 20960131 -145690165 - MTA_Mm LTR MaLR 0 396 1 6 744 568 218 60 8 chrX 20960141 20960275 -145690021 + L1MA6 LINE L1 5666 5806 -485 6 744 441 122 95 0 chrX 20960281 20960355 -145689941 + MT2B LTR ERVL 1 81 -520 6 744 953 166 13 0 chrX 20960338 20960495 -145689801 + MT2B LTR ERVL 373 531 -70 6 744 3500 108 6 41 chrX 20960494 20961036 -145689260 + MT2B LTR ERVL 79 601 0 6 744 919 267 132 27 chrX 20961039 20961478 -145688818 + L1MA6 LINE L1 5813 6297 -3 6 744 759 225 110 0 chrX 20961478 20961660 -145688636 + B3 SINE B2 1 202 -14 6 744 258 39 38 38 chrX 20962606 20962659 -145687637 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 6 744 200 34 0 33 chrX 20962686 20962716 -145687580 + (TTTTTA)n Simple_repeat Simple_repeat 1 29 0 6 744 225 0 0 0 chrX 20962935 20962960 -145687336 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 744 294 50 0 0 chrX 20962960 20962999 -145687297 + (GA)n Simple_repeat Simple_repeat 2 41 0 6 744 894 215 40 35 chrX 20963249 20963447 -145686849 + B3 SINE B2 3 201 -15 6 744 681 0 0 0 chrX 20963557 20963636 -145686660 + L1Md_A LINE L1 6504 6582 0 6 744 768 299 165 16 chrX 20963691 20964061 -145686235 + Lx8 LINE L1 6823 7247 -226 6 744 1657 182 164 43 chrX 20964106 20964478 -145685818 - MTC LTR MaLR -1 420 4 6 744 1042 326 85 21 chrX 20966080 20966597 -145683699 + Lx8 LINE L1 6867 7416 -57 6 744 837 123 20 14 chrX 20966812 20966960 -145683336 + URR1A DNA MER1_type 77 225 -1 6 744 2288 155 35 3 chrX 20967482 20967857 -145682439 + MTD LTR MaLR 19 405 -14 6 744 2192 98 12 0 chrX 20968028 20968354 -145681942 + RLTR10A LTR ERVK 1 330 -81 6 744 197 82 0 75 chrX 20968357 20968410 -145681886 + GA-rich Low_complexity Low_complexity 1 49 0 6 744 274 57 0 0 chrX 20968452 20968487 -145681809 - L1Md_F3 LINE L1 -494 6090 6056 6 744 4577 28 0 0 chrX 20968487 20968983 -145681313 + L1Md_F3 LINE L1 6075 6570 -14 6 744 653 261 80 65 chrX 20969049 20969250 -145681046 + B4A SINE B4 1 204 -88 6 744 350 253 33 0 chrX 20969253 20969344 -145680952 - Lx9 LINE L1 -336 7308 7215 6 744 718 259 86 19 chrX 20969377 20969586 -145680710 - MER102a DNA MER1_type -106 224 2 6 11 1128 204 0 36 chrX 20971513 20971737 -145678559 - B3 SINE B2 0 216 1 6 745 25 51 0 0 chrX 20971742 20971781 -145678515 + AT_rich Low_complexity Low_complexity 1 39 0 6 745 345 146 22 22 chrX 20972023 20972114 -145678182 + (CATA)n Simple_repeat Simple_repeat 2 92 0 6 745 1761 240 66 10 chrX 20972175 20972699 -145677597 + Lx7 LINE L1 5505 6030 -1666 6 745 511 205 16 0 chrX 20972699 20972821 -145677475 + Lx9 LINE L1 7519 7642 -2 6 745 294 339 44 9 chrX 20972873 20972986 -145677310 + B3A SINE B2 66 182 -16 6 745 875 308 43 7 chrX 20973191 20973469 -145676827 + ORR1D2 LTR MaLR 56 343 -27 6 745 370 195 24 0 chrX 20973669 20973751 -145676545 - Lx7 LINE L1 0 7696 7613 6 745 285 29 0 0 chrX 20973778 20973812 -145676484 + (CCA)n Simple_repeat Simple_repeat 1 34 0 6 745 273 57 0 0 chrX 20973834 20973869 -145676427 + (CCAA)n Simple_repeat Simple_repeat 1 35 0 7 745 1937 134 3 59 chrX 20973976 20974316 -145675980 + ORR1A4 LTR MaLR 1 321 -8 7 745 640 64 18 35 chrX 20974938 20975052 -145675244 + L1Md_F2 LINE L1 6471 6582 0 7 745 243 200 23 81 chrX 20975190 20975277 -145675019 - L1MB4 LINE L1 -6401 206 125 7 745 1169 245 46 20 chrX 20975337 20975641 -145674655 + Lx7 LINE L1 6065 6376 -1320 6 745 674 266 32 75 chrX 20975664 20975705 -145674591 - B3A SINE B2 -18 180 153 7 745 465 34 0 0 chrX 20975705 20975764 -145674532 + (TG)n Simple_repeat Simple_repeat 2 60 0 7 745 674 266 32 75 chrX 20975764 20975909 -145674387 - B3A SINE B2 -46 152 2 7 745 2332 50 25 0 chrX 20975949 20976231 -145674065 - L1Md_F3 LINE L1 0 6584 6296 7 745 449 254 34 8 chrX 20976284 20976403 -145673893 - RMER15 LTR ERVL -13 562 441 7 745 432 0 0 0 chrX 20976708 20976756 -145673540 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 7 745 1285 35 0 0 chrX 20976758 20976899 -145673397 - B1_Mm SINE Alu -6 141 1 7 745 930 258 40 28 chrX 20976954 20977205 -145673091 + Lx6 LINE L1 7199 7452 -8 7 745 180 408 18 60 chrX 20977459 20977593 -145672703 - MIRb SINE MIR -107 161 33 7 745 1125 94 0 0 chrX 20977593 20977753 -145672543 + (TTTTC)n Simple_repeat Simple_repeat 5 164 0 7 745 180 408 18 60 chrX 20977753 20977785 -145672511 - MIRb SINE MIR -236 32 2 7 745 271 274 0 97 chrX 20977895 20977988 -145672308 + L1M1 LINE L1 5652 5735 -565 7 745 303 280 40 13 chrX 20978347 20978423 -145671873 - ID4_ SINE ID 0 83 6 7 745 432 262 123 0 chrX 20978437 20978559 -145671737 - B1F SINE Alu -12 137 1 7 745 499 238 89 0 chrX 20978616 20978717 -145671579 - B1_Mur2 SINE Alu -39 110 1 7 745 225 319 53 0 chrX 20978786 20978880 -145671416 - MIRb SINE MIR -111 157 59 7 745 1935 80 108 0 chrX 20979046 20979334 -145670962 - ORR1A2 LTR MaLR -8 319 1 7 745 4101 124 184 13 chrX 20979363 20980074 -145670222 - Lx2 LINE L1 0 6997 6165 7 745 642 60 0 0 chrX 20980075 20980158 -145670138 + (TC)n Simple_repeat Simple_repeat 2 84 0 7 745 813 222 7 0 chrX 20980163 20980307 -145669989 - B1_Mus1 SINE Alu -1 147 3 7 745 258 105 0 0 chrX 20980312 20980350 -145669946 + (T)n Simple_repeat Simple_repeat 1 38 0 7 745 38856 29 0 1 chrX 20980366 20987001 -145663295 - L1Md_T LINE L1 0 6585 1 7 745 320 179 0 0 chrX 20987034 20987090 -145663206 - Lx LINE L1 -125 6529 6474 7 745 7765 80 9 11 chrX 20987094 20988143 -145662153 + L1_Mus3 LINE L1 5587 6633 -5 7 745 1507 51 6 0 chrX 20988235 20988411 -145661885 - B2_Mm1a SINE B2 -14 179 3 7 745 3051 280 73 33 chrX 20988429 20989477 -145660819 - Lx8 LINE L1 -121 7352 6263 7 745 641 323 63 62 chrX 20989477 20989824 -145660472 + MLT1A1 LTR MaLR 15 401 -7 7 745 835 312 50 82 chrX 20989886 20990284 -145660012 + L1ME1 LINE L1 5489 5908 -271 7 745 1233 68 0 0 chrX 20990284 20990431 -145659865 + B1_Mm SINE Alu 1 147 0 7 745 835 312 50 82 chrX 20990431 20990737 -145659559 + L1ME1 LINE L1 5909 6170 -9 7 745 233 379 75 15 chrX 20990848 20991049 -145659247 - L2c LINE L2 -258 3129 2917 7 745 2609 250 115 10 chrX 20991151 20991506 -145658790 + Lx8 LINE L1 6412 6798 -675 7 745 432 0 0 0 chrX 20991506 20991554 -145658742 + (TC)n Simple_repeat Simple_repeat 1 48 0 7 745 2609 250 115 10 chrX 20991554 20991928 -145658368 + Lx8 LINE L1 6799 7217 -256 7 745 1100 316 99 37 chrX 20991962 20992608 -145657688 - Lx9 LINE L1 -171 7473 6789 7 745 3567 43 0 2 chrX 20994243 20994640 -145655656 + MTA_Mm LTR MaLR 1 396 0 7 745 4231 98 23 15 chrX 20994640 20995362 -145654934 + MTA_Mm-int LTR MaLR 1 739 -519 7 745 1040 128 0 0 chrX 20995362 20995511 -145654785 - Lx5 LINE L1 -585 6465 6317 7 745 1076 234 9 18 chrX 20995516 20995734 -145654562 + B3 SINE B2 1 216 0 7 745 2867 274 73 39 chrX 20995763 20996703 -145653593 + Lx8 LINE L1 6183 7154 -319 7 745 198 0 0 0 chrX 20997109 20997131 -145653165 + (TG)n Simple_repeat Simple_repeat 1 22 0 7 745 389 145 13 0 chrX 20997693 20997769 -145652527 + (TCTG)n Simple_repeat Simple_repeat 2 78 0 7 745 327 25 0 0 chrX 20997775 20997815 -145652481 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 745 615 272 14 62 chrX 20997822 20997967 -145652329 - RSINE1 SINE B4 -24 141 4 7 745 480 263 128 5 chrX 20997982 20998169 -145652127 + L1MA9 LINE L1 6065 6274 -38 7 745 725 281 48 6 chrX 20998337 20998674 -145651622 - L1M4 LINE L1 -757 5389 5039 7 745 825 301 51 43 chrX 20998717 20999185 -145651111 + L1M4 LINE L1 4325 4796 -1350 7 745 847 303 42 11 chrX 20999191 20999455 -145650841 + B4A SINE B4 3 274 -18 7 745 246 337 10 10 chrX 20999457 20999553 -145650743 + (CATA)n Simple_repeat Simple_repeat 3 98 0 7 745 879 164 7 0 chrX 20999824 20999964 -145650332 + B1_Mus1 SINE Alu 6 146 -2 7 745 589 319 94 45 chrX 21000060 21000326 -145649970 + ORR1E LTR MaLR 71 349 -10 1 745 23 0 0 0 chrX 21000378 21000401 -145649895 + AT_rich Low_complexity Low_complexity 1 23 0 2 745 2162 182 98 2 chrX 21000440 21000919 -145649377 - Lx9 LINE L1 -62 7582 7058 3 745 415 263 125 49 chrX 21000970 21001234 -145649062 - L1MD LINE L1 -2390 3756 3473 4 745 465 254 8 58 chrX 21001253 21001374 -145648922 - B1F1 SINE Alu -34 115 1 5 745 239 186 87 113 chrX 21001695 21001720 -145648576 - L1M2 LINE L1 -3085 3055 3038 6 745 651 221 44 0 chrX 21001720 21001856 -145648440 - B1_Mur3 SINE Alu -6 143 2 7 745 239 186 87 113 chrX 21001856 21001945 -145648351 - L1M2 LINE L1 -3103 3037 2944 6 745 602 251 154 39 chrX 21002053 21002235 -145648061 - B3 SINE B2 -13 203 1 8 745 370 298 38 66 chrX 21002239 21002422 -145647874 - L1M2 LINE L1 -3762 2381 2204 6 745 3603 177 238 13 chrX 21002725 21003558 -145646738 - RLTR25B LTR ERVK -1 1027 8 9 745 624 278 21 0 chrX 21003901 21004045 -145646251 + RSINE1 SINE B4 2 148 -17 1 745 389 20 20 0 chrX 21005198 21005248 -145645048 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 745 991 224 0 40 chrX 21005290 21005490 -145644806 - B3 SINE B2 -23 193 2 1 745 224 329 0 0 chrX 21005502 21005578 -145644718 - L3 LINE CR1 -311 4178 4103 1 745 640 259 60 46 chrX 21006115 21006420 -145643876 - L1_Mur3 LINE L1 -708 5592 5260 1 745 709 67 217 0 chrX 21006420 21006540 -145643756 - B1_Mm SINE Alu 0 147 2 1 745 560 303 78 66 chrX 21006540 21006566 -145643730 - L1_Mur3 LINE L1 -621 5259 5242 1 745 197 33 33 0 chrX 21006566 21006596 -145643700 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 745 560 303 78 66 chrX 21006596 21006776 -145643520 - L1_Mur3 LINE L1 -639 5241 5040 1 745 306 250 114 9 chrX 21006781 21006886 -145643410 - PB1D7 SINE Alu 0 120 5 1 745 414 303 89 18 chrX 21007117 21007285 -145643011 + ORR1D2 LTR MaLR 1 180 -190 1 745 255 62 0 0 chrX 21007312 21007344 -145642952 + U2 snRNA snRNA 5 36 -152 1 745 410 248 58 20 chrX 21007528 21007667 -145642629 + ORR1D2 LTR MaLR 226 374 -5 1 745 306 278 9 0 chrX 21007671 21007779 -145642517 - L1M2 LINE L1 -1138 5005 4897 2 745 182 344 32 139 chrX 21007783 21007999 -145642297 - L3 LINE CR1 -500 3989 3797 1 745 620 215 0 16 chrX 21008497 21008620 -145641676 + B1_Mur1 SINE Alu 23 143 -6 2 745 245 308 27 89 chrX 21008501 21008647 -145641649 + B4A SINE B4 112 248 -44 2 745 296 233 70 0 chrX 21008806 21008892 -145641404 + Lx7 LINE L1 6745 6836 -860 2 745 1164 292 88 25 chrX 21008888 21009414 -145640882 + Lx8 LINE L1 6906 7464 -9 2 745 228 279 51 0 chrX 21009347 21009426 -145640870 + RMER1C Other Other 1241 1323 -19 2 745 235 350 19 0 chrX 21009440 21009543 -145640753 + L3 LINE CR1 4229 4333 -156 2 745 180 328 131 15 chrX 21009548 21009746 -145640550 - L3 LINE CR1 -713 3776 3556 1 745 239 377 88 7 chrX 21009864 21010011 -145640285 - L4 LINE RTE -498 1531 1373 2 745 378 0 0 0 chrX 21010023 21010065 -145640231 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 745 932 261 9 0 chrX 21010196 21010407 -145639889 - ID_B1 SINE B4 -10 214 2 2 745 343 295 35 28 chrX 21010524 21010621 -145639675 + MIR SINE MIR 48 145 -117 3 745 249 33 0 0 chrX 21010621 21010651 -145639645 + (CTG)n Simple_repeat Simple_repeat 1 30 0 3 745 343 295 35 28 chrX 21010651 21010696 -145639600 + MIR SINE MIR 146 191 -71 3 745 711 241 11 23 chrX 21010717 21010891 -145639405 - MER5B DNA MER1_type -6 172 1 3 745 185 311 16 0 chrX 21010891 21010952 -145639344 + MIR SINE MIR 200 261 -1 3 745 242 321 76 13 chrX 21011161 21011319 -145638977 - ALINE LINE RTE -225 392 225 3 745 353 357 82 12 chrX 21012286 21012456 -145637840 - L3 LINE CR1 -951 3538 3357 1 745 6544 54 2 2 chrX 21012467 21013281 -145637015 - L1Md_F2 LINE L1 0 6582 5769 3 745 1729 75 47 0 chrX 21013641 21013894 -145636402 - L1_Mus3 LINE L1 -7 6631 6367 3 745 966 197 67 10 chrX 21014053 21014248 -145636048 - B3 SINE B2 -6 210 5 3 745 559 82 0 0 chrX 21014714 21014799 -145635497 + Lx2 LINE L1 6559 6643 -354 3 745 1394 65 60 5 chrX 21014799 21015000 -145635296 + Lx2 LINE L1 6775 6986 -11 3 745 264 59 0 0 chrX 21015196 21015230 -145635066 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 3 745 182 320 85 31 chrX 21015502 21015631 -145634665 + MIR SINE MIR 101 236 -26 3 745 320 295 117 32 chrX 21015707 21015861 -145634435 - B3 SINE B2 -3 213 47 4 745 2298 224 85 10 chrX 21016671 21017274 -145633022 - RMER1C Other Other -1 1341 694 4 745 1711 47 0 0 chrX 21017297 21017511 -145632785 + L1Md_F2 LINE L1 6367 6580 -2 4 745 206 105 26 0 chrX 21017526 21017564 -145632732 + (CAA)n Simple_repeat Simple_repeat 1 39 0 4 745 324 0 0 0 chrX 21018059 21018095 -145632201 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 745 220 196 138 35 chrX 21018096 21018154 -145632142 - RSINE1 SINE B4 -18 147 84 4 745 229 254 0 0 chrX 21019344 21019407 -145630889 - Lx3C LINE L1 -690 6286 6224 4 745 3994 143 36 16 chrX 21019407 21020094 -145630202 + Lx3C LINE L1 6274 6974 -2 4 745 3213 63 0 2 chrX 21020353 21020750 -145629546 - MTA_Mm LTR MaLR 0 396 1 4 745 1105 262 41 31 chrX 21021157 21021448 -145628848 - ORR1D2 LTR MaLR -62 308 15 4 745 270 64 0 0 chrX 21021485 21021532 -145628764 - L1Md_F2 LINE L1 -7 6575 6529 5 745 2299 295 62 24 chrX 21021796 21022745 -145627551 + Lx8 LINE L1 6127 7111 -362 5 745 336 309 82 21 chrX 21022879 21023149 -145627147 + L1M2 LINE L1 2741 3021 -3122 5 745 3153 92 2 2 chrX 21023149 21023583 -145626713 + Lx3A LINE L1 6546 6979 -2 5 745 336 309 82 21 chrX 21023583 21023643 -145626653 + L1M2 LINE L1 3022 3091 -3052 5 745 1957 41 48 7 chrX 21023645 21023915 -145626381 - L1_Mus4 LINE L1 -612 6024 5744 5 745 4169 124 5 8 chrX 21023918 21024554 -145625742 + L1_Mus4 LINE L1 5994 6627 -9 5 745 268 248 128 113 chrX 21024654 21024936 -145625360 + L1M2 LINE L1 3667 3952 -2188 5 745 299 145 60 170 chrX 21025075 21025175 -145625121 + MTD LTR MaLR 290 418 -1 5 745 429 70 0 0 chrX 21025194 21025251 -145625045 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 745 279 218 18 0 chrX 21025347 21025402 -145624894 - ID_B1 SINE B4 0 224 169 5 745 1610 158 59 10 chrX 21025405 21025711 -145624585 + Lx4B LINE L1 6738 7058 0 5 745 23 0 0 0 chrX 21025711 21025734 -145624562 + AT_rich Low_complexity Low_complexity 1 23 0 6 745 319 272 136 0 chrX 21025742 21025867 -145624429 + B1F1 SINE Alu 1 142 -7 6 745 6367 118 26 5 chrX 21026103 21027123 -145623173 + Lx3A LINE L1 5939 6980 -1 6 745 328 333 28 37 chrX 21027199 21027308 -145622988 + B1F1 SINE Alu 1 108 -41 6 745 465 274 0 61 chrX 21027219 21027351 -145622945 + ID_B1 SINE B4 100 223 -1 6 745 300 27 0 0 chrX 21027357 21027394 -145622902 + (GGA)n Simple_repeat Simple_repeat 2 38 0 6 745 201 389 39 16 chrX 21028583 21028711 -145621585 - MIRc SINE MIR -107 161 31 6 745 195 312 0 0 chrX 21029310 21029358 -145620938 - MIR SINE MIR -64 144 97 6 745 342 0 0 0 chrX 21029505 21029543 -145620753 + (TC)n Simple_repeat Simple_repeat 2 39 0 6 745 402 309 0 74 chrX 21030666 21030841 -145619455 + RSINE1 SINE B4 2 163 -2 6 745 387 0 0 0 chrX 21030849 21030892 -145619404 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 745 227 103 0 25 chrX 21030900 21030940 -145619356 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 7 745 383 238 123 27 chrX 21030998 21031158 -145619138 - L1MCa LINE L1 -4190 2318 2133 7 745 384 22 0 0 chrX 21031158 21031203 -145619093 + (TAAAA)n Simple_repeat Simple_repeat 1 45 0 7 745 383 238 123 27 chrX 21031203 21031262 -145619034 - L1MCa LINE L1 -4376 2132 2078 7 745 543 237 9 9 chrX 21031269 21031384 -145618912 - PB1D10 SINE Alu -2 115 1 7 745 255 269 98 32 chrX 21031390 21031513 -145618783 - L1MCa LINE L1 -4447 2061 1931 7 745 328 263 149 135 chrX 21031558 21031728 -145618568 - L1MCa LINE L1 -4691 1817 1631 7 745 773 335 32 7 chrX 21031728 21032008 -145618288 - B4A SINE B4 -5 287 1 7 745 328 263 149 135 chrX 21032008 21032052 -145618244 - L1MCa LINE L1 -4878 1630 1600 7 745 403 167 76 22 chrX 21032130 21032222 -145618074 - PB1D9 SINE Alu 0 120 24 7 745 263 259 142 35 chrX 21032223 21032455 -145617841 - L1MCa LINE L1 -4991 1517 1261 7 745 792 230 50 68 chrX 21032465 21032684 -145617612 - B3 SINE B2 0 216 2 7 745 419 241 36 0 chrX 21032741 21032853 -145617443 - L1MCa LINE L1 -5346 1162 1047 7 745 185 35 0 65 chrX 21032906 21032937 -145617359 + (TCCC)n Simple_repeat Simple_repeat 1 29 0 7 745 741 222 0 0 chrX 21032968 21033139 -145617157 + CT-rich Low_complexity Low_complexity 1 171 0 7 745 731 162 28 42 chrX 21033145 21033287 -145617009 - B1_Mur4 SINE Alu -9 141 2 8 745 261 316 16 82 chrX 21033314 21033497 -145616799 - L1M5 LINE L1 -566 5558 5388 8 745 4086 45 0 16 chrX 21033510 21034026 -145616270 + L1Md_F2 LINE L1 6075 6582 0 8 745 264 122 0 0 chrX 21034109 21034150 -145616146 + (TTA)n Simple_repeat Simple_repeat 2 42 0 8 745 25 51 0 0 chrX 21034256 21034295 -145616001 + AT_rich Low_complexity Low_complexity 1 39 0 8 745 695 215 48 29 chrX 21034295 21034512 -145615784 - Lx4B LINE L1 -33 7025 6732 8 745 346 85 0 33 chrX 21034624 21034685 -145615611 + (TTA)n Simple_repeat Simple_repeat 2 60 0 8 745 477 0 0 0 chrX 21034685 21034737 -145615559 + (TC)n Simple_repeat Simple_repeat 2 54 0 8 745 579 246 57 43 chrX 21034737 21034869 -145615427 - B1F1 SINE Alu -12 137 3 8 745 23 0 0 0 chrX 21035204 21035227 -145615069 + AT_rich Low_complexity Low_complexity 1 23 0 8 745 465 218 23 0 chrX 21035275 21035362 -145614934 - B3A SINE B2 -105 93 5 9 745 203 400 0 0 chrX 21035666 21035746 -145614550 + MIRb SINE MIR 22 101 -167 9 745 185 276 0 79 chrX 21035853 21035916 -145614380 + MIRm SINE MIR 82 139 -137 9 745 4355 132 12 8 chrX 21037321 21038383 -145611913 - Lx2 LINE L1 -678 6319 5253 9 745 2018 137 6 6 chrX 21038380 21038726 -145611570 + Lx2 LINE L1 6336 6681 -316 9 745 960 276 60 9 chrX 21038716 21039147 -145611149 + L1MA6 LINE L1 5785 6237 -63 9 745 1092 231 26 88 chrX 21039148 21039473 -145610823 - L1M2 LINE L1 -405 5768 5474 9 745 4365 74 35 13 chrX 21039473 21040075 -145610221 - L1Md_F2 LINE L1 -8 6574 5960 9 745 1359 240 109 30 chrX 21040075 21040684 -145609612 - L1M2 LINE L1 -827 5473 4799 9 745 1340 230 77 3 chrX 21040685 21040982 -145609314 + MTD LTR MaLR 98 416 -3 9 745 447 19 0 0 chrX 21041491 21041543 -145608753 + (GA)n Simple_repeat Simple_repeat 1 52 0 9 745 449 88 12 0 chrX 21042088 21042168 -145608128 + (GA)n Simple_repeat Simple_repeat 2 82 0 9 745 702 269 14 43 chrX 21042430 21042640 -145607656 - B3 SINE B2 -12 204 1 1 745 464 207 0 9 chrX 21043324 21043436 -145606860 + CT-rich Low_complexity Low_complexity 2 112 0 1 745 480 224 128 0 chrX 21043447 21043572 -145606724 - B1_Mur3 SINE Alu -7 142 2 1 745 33674 36 0 0 chrX 21043609 21049034 -145601262 + L1Md_T LINE L1 67 5589 -297 1 745 8841 5 0 32 chrX 21049034 21049477 -145600819 + L1Md_T LINE L1 5590 6032 -553 1 745 1627 21 0 25 chrX 21049477 21049674 -145600622 + B2_Mm1t SINE B2 2 193 0 1 745 8841 5 0 32 chrX 21049674 21050259 -145600037 + L1Md_T LINE L1 6033 6585 0 1 745 509 294 108 60 chrX 21050447 21050827 -145599469 - Lx8 LINE L1 -1 7472 7075 1 745 1095 201 34 0 chrX 21050985 21051189 -145599107 - B3 SINE B2 -4 212 2 1 745 3042 30 47 0 chrX 21051734 21052099 -145598197 + L1Md_F2 LINE L1 6198 6579 -3 1 745 319 212 23 23 chrX 21052129 21052216 -145598080 + L1MB8 LINE L1 6040 6126 -52 1 745 384 22 0 0 chrX 21052594 21052639 -145597657 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 745 1504 193 160 13 chrX 21052639 21053107 -145597189 + Lx7 LINE L1 6826 7362 -334 1 745 221 252 38 28 chrX 21053109 21053215 -145597081 + (TA)n Simple_repeat Simple_repeat 2 108 0 1 745 418 197 80 7 chrX 21053216 21053354 -145596942 + Lx7 LINE L1 7382 7529 -167 1 745 351 0 0 0 chrX 21053361 21053400 -145596896 + (TTA)n Simple_repeat Simple_repeat 3 41 0 1 745 1386 132 0 5 chrX 21053412 21053618 -145596678 - RMER4B LTR ERVK 0 585 381 1 745 796 275 5 5 chrX 21053622 21053845 -145596451 - Lx7 LINE L1 -445 7251 7029 1 745 180 0 0 0 chrX 21054490 21054510 -145595786 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 745 27 29 0 0 chrX 21054801 21054835 -145595461 + AT_rich Low_complexity Low_complexity 1 34 0 1 745 302 279 257 52 chrX 21054839 21054975 -145595321 - RSINE1 SINE B4 0 165 2 1 745 1019 250 133 39 chrX 21055896 21056258 -145594038 + MTD LTR MaLR 10 405 -14 1 745 432 267 0 0 chrX 21056310 21056411 -145593885 - PB1D10 SINE Alu -16 101 1 1 745 225 0 0 0 chrX 21057228 21057253 -145593043 + (CAGC)n Simple_repeat Simple_repeat 2 26 0 1 745 415 315 0 0 chrX 21058002 21058112 -145592184 - B1F SINE Alu -30 120 10 1 745 1189 197 9 5 chrX 21058667 21058881 -145591415 + B3 SINE B2 2 216 0 1 745 254 344 58 26 chrX 21060524 21060679 -145589617 + MIR SINE MIR 20 179 -83 1 745 369 335 130 13 chrX 21060644 21060874 -145589422 - MIR SINE MIR 0 262 6 1 745 921 190 27 41 chrX 21066322 21066541 -145583755 + B3 SINE B2 1 216 0 1 745 243 146 0 0 chrX 21066542 21066583 -145583713 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1 745 1320 132 27 42 chrX 21066930 21067192 -145583104 + Lx3C LINE L1 6717 6974 -2 1 745 234 0 0 0 chrX 21067198 21067224 -145583072 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1 745 21 0 0 0 chrX 21068360 21068381 -145581915 + AT_rich Low_complexity Low_complexity 1 21 0 1 745 985 229 5 5 chrX 21068980 21069182 -145581114 - B3 SINE B2 -14 202 1 1 745 5752 94 23 1 chrX 21069218 21070407 -145579889 + L1_Mus3 LINE L1 5229 6444 -194 1 745 629 283 40 55 chrX 21070958 21071160 -145579136 + MLT1B LTR MaLR 192 390 0 1 745 1327 320 115 23 chrX 21071161 21072291 -145578005 + ERVL-B4-int LTR ERVL 2 1191 -4523 1 745 2663 292 41 17 chrX 21072415 21072518 -145577778 + Lx8 LINE L1 6203 6304 -1169 1 745 6133 105 1 7 chrX 21072518 21073379 -145576917 - Lx LINE L1 -4 6650 5795 1 745 2663 292 41 17 chrX 21073379 21074100 -145576196 + Lx8 LINE L1 6305 7047 -426 1 745 402 367 48 4 chrX 21074109 21074339 -145575957 + ERVL-B4-int LTR ERVL 1420 1659 -4098 1 745 1727 228 117 8 chrX 21074381 21075201 -145575095 + ERVL-B4-int LTR ERVL 1730 2638 -3076 1 745 1928 88 0 0 chrX 21075260 21075520 -145574776 + MTB LTR MaLR 141 400 0 1 745 1355 279 112 87 chrX 21075618 21077272 -145573024 - RMER1A Other Other -14 1016 2 1 745 396 0 0 0 chrX 21077630 21077674 -145572622 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1 745 761 228 0 26 chrX 21077674 21077816 -145572480 - B1_Mur4 SINE Alu -8 142 1 1 745 25 0 0 0 chrX 21077832 21077857 -145572439 + AT_rich Low_complexity Low_complexity 1 25 0 1 745 388 254 37 0 chrX 21077905 21078039 -145572257 + L1MC LINE L1 5180 5318 -828 1 745 1287 168 0 0 chrX 21078210 21078413 -145571883 - MTC LTR MaLR -115 306 104 1 745 7178 71 19 0 chrX 21078432 21079872 -145570424 - L1_Mus1 LINE L1 0 6567 5102 1 745 384 292 27 54 chrX 21079872 21079984 -145570312 - RSINE1 SINE B4 -46 119 11 1 745 6333 38 5 4 chrX 21080081 21080881 -145569415 - L1Md_F2 LINE L1 -158 6424 5624 1 745 2520 42 11 174 chrX 21081340 21081776 -145568520 + RLTR10B2 LTR ERVK 1 365 0 1 745 552 287 165 0 chrX 21082759 21082996 -145567300 + Lx8 LINE L1 6356 6631 -842 1 745 574 231 116 29 chrX 21083098 21083236 -145567060 - B3A SINE B2 -48 150 1 1 745 447 152 59 7 chrX 21083261 21083372 -145566924 - ORR1C2 LTR MaLR 0 384 251 1 745 4049 76 0 0 chrX 21083372 21083979 -145566317 - L1_Mm LINE L1 -3747 2136 1530 1 745 2863 70 0 0 chrX 21083976 21084376 -145565920 + L1_Mm LINE L1 2252 2651 -3232 1 745 2277 68 37 0 chrX 21084374 21084699 -145565597 + L1_Mm LINE L1 3242 3578 -2305 1 745 2570 71 3 0 chrX 21084708 21085058 -145565238 + L1_Mm LINE L1 4895 5245 -638 1 745 1013 160 0 32 chrX 21085071 21085258 -145565038 + RMER5 LTR ERV1 346 526 -8 1 745 216 327 0 0 chrX 21085269 21085324 -145564972 + RSINE1 SINE B4 68 122 -43 1 745 408 283 163 0 chrX 21085328 21085494 -145564802 + L1MA8 LINE L1 5138 5330 -813 1 745 1290 257 73 18 chrX 21085497 21086004 -145564292 + L1MA8 LINE L1 5744 6278 -13 1 745 459 0 0 0 chrX 21086616 21086667 -145563629 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 745 37 39 0 0 chrX 21088321 21088372 -145561924 + AT_rich Low_complexity Low_complexity 1 51 0 1 745 8712 151 76 118 chrX 21088622 21089598 -145560698 + L1_Mur3 LINE L1 3481 4224 -1656 1 745 8833 15 0 0 chrX 21089598 21090593 -145559703 + L1Md_A LINE L1 5587 6581 -1 1 745 8712 151 76 118 chrX 21090593 21092009 -145558287 + L1_Mur3 LINE L1 4225 5773 -107 1 745 2568 233 100 78 chrX 21092009 21092315 -145557981 + RMER19B LTR ERVK 1 308 -594 1 745 207 0 0 0 chrX 21092315 21092338 -145557958 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 745 2568 233 100 78 chrX 21092338 21092773 -145557523 + RMER19B LTR ERVK 309 762 -140 1 745 5665 156 19 10 chrX 21092773 21092918 -145557378 - Lx2B LINE L1 -1 6999 6859 1 745 2426 88 188 0 chrX 21092918 21093318 -145556978 - IAPLTR2_Mm LTR ERVK 0 475 1 1 745 5665 156 19 10 chrX 21093318 21094154 -145556142 - Lx2B LINE L1 -142 6858 6009 1 745 2568 233 100 78 chrX 21094154 21094282 -145556014 + RMER19B LTR ERVK 763 890 -12 1 745 235 330 58 10 chrX 21094351 21094556 -145555740 + Lx6 LINE L1 5191 5405 -475 1 745 404 306 33 28 chrX 21094546 21094761 -145555535 - L1M2 LINE L1 -959 5184 4969 1 745 252 0 0 0 chrX 21094773 21094801 -145555495 + (T)n Simple_repeat Simple_repeat 1 28 0 1 745 339 304 0 0 chrX 21094801 21094870 -145555426 + RSINE1 SINE B4 4 72 -93 1 745 1582 167 73 26 chrX 21094873 21095175 -145555121 + ORR1B2 LTR MaLR 52 367 0 1 745 471 283 0 0 chrX 21095176 21095321 -145554975 - L1M2 LINE L1 -1276 4867 4723 1 745 473 197 30 22 chrX 21095348 21095483 -145554813 + Lx6 LINE L1 5769 5904 -1556 1 745 262 256 226 5 chrX 21095490 21095698 -145554598 - L1M2 LINE L1 -864 5279 5026 1 745 244 218 91 0 chrX 21095905 21095960 -145554336 + RMER15 LTR ERVL 1 60 -515 1 745 1078 252 261 27 chrX 21095982 21096431 -145553865 + RMER15 LTR ERVL 22 575 0 1 745 202 391 70 8 chrX 21096471 21096600 -145553696 + L2a LINE L2 3282 3418 -8 1 745 180 324 76 76 chrX 21096800 21096957 -145553339 - MIR SINE MIR -64 198 42 1 745 1050 91 18 0 chrX 21097488 21097653 -145552643 + (TTTC)n Simple_repeat Simple_repeat 2 169 0 1 745 25 31 0 0 chrX 21098270 21098302 -145551994 + AT_rich Low_complexity Low_complexity 1 32 0 1 745 1709 205 53 6 chrX 21098542 21098880 -145551416 + Lx5 LINE L1 6494 6847 -203 1 745 321 264 64 32 chrX 21098968 21099093 -145551203 + MTD LTR MaLR 10 138 -281 1 745 567 298 6 17 chrX 21099109 21099290 -145551006 + Lx5 LINE L1 6864 7042 -8 1 745 1550 104 35 0 chrX 21099334 21099565 -145550731 + L1_Mus3 LINE L1 6394 6632 -6 1 745 21 0 0 0 chrX 21099573 21099594 -145550702 + AT_rich Low_complexity Low_complexity 1 21 0 1 745 8225 97 6 22 chrX 21100521 21102494 -145547802 - L1Md_F2 LINE L1 -1 6566 4630 1 93 11040 72 6 7 chrX 21102471 21104725 -145545571 - L1Md_F2 LINE L1 0 6582 4329 1 746 32071 68 5 1 chrX 21104720 21110838 -145539458 - L1Md_T LINE L1 -2 6580 431 1 746 8422 34 0 0 chrX 21110965 21111956 -145538340 - L1Md_T LINE L1 0 6582 5592 1 746 361 333 82 126 chrX 21112245 21112609 -145537687 - ORR1E LTR MaLR -11 348 1 1 746 628 124 159 7 chrX 21112645 21112757 -145537539 - Lx LINE L1 -2 6652 6536 1 746 225 0 0 0 chrX 21112757 21112782 -145537514 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 1 746 628 124 159 7 chrX 21112782 21112807 -145537489 - Lx LINE L1 -119 6535 6495 1 746 289 295 75 9 chrX 21113360 21113466 -145536830 + MER53 DNA hAT 81 193 0 1 746 25 31 0 0 chrX 21113720 21113752 -145536544 + AT_rich Low_complexity Low_complexity 1 32 0 1 746 291 28 0 0 chrX 21115134 21115170 -145535126 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 746 429 20 0 0 chrX 21115170 21115219 -145535077 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 746 865 173 6 11 chrX 21115289 21115470 -145534826 + CT-rich Low_complexity Low_complexity 1 180 0 1 746 23 0 0 0 chrX 21117567 21117590 -145532706 + AT_rich Low_complexity Low_complexity 1 23 0 1 746 524 221 122 0 chrX 21117807 21117938 -145532358 - B1F2 SINE Alu 0 149 3 1 746 263 279 0 42 chrX 21118226 21118297 -145531999 - ID4 SINE ID -14 69 2 1 746 454 282 61 8 chrX 21118334 21118466 -145531830 - B1F1 SINE Alu -10 139 1 1 746 336 350 0 12 chrX 21118579 21118685 -145531611 + MIRb SINE MIR 8 118 -150 1 746 339 273 0 0 chrX 21119350 21119427 -145530869 + ID4_ SINE ID 2 78 -5 1 746 291 93 0 0 chrX 21119434 21119477 -145530819 + (CCAA)n Simple_repeat Simple_repeat 1 43 0 1 746 5731 69 8 1 chrX 21119493 21120238 -145530058 - L1_Mus2 LINE L1 -129 6438 5689 1 746 855 96 0 35 chrX 21120238 21120379 -145529917 + L1_Mus2 LINE L1 6430 6565 -1 1 746 687 256 86 4 chrX 21121313 21121568 -145528728 + L1MB2 LINE L1 5880 6155 -16 1 746 200 114 29 0 chrX 21122686 21122721 -145527575 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 1 746 1034 101 33 11 chrX 21122737 21122918 -145527378 - L1Md_F2 LINE L1 0 6582 6398 1 746 1757 34 0 0 chrX 21122918 21123125 -145527171 + L1Md_F2 LINE L1 5595 5801 -781 1 746 5361 79 4 1 chrX 21123125 21123837 -145526459 - L1Md_F2 LINE L1 -7 6575 5862 2 746 227 229 75 22 chrX 21123845 21123979 -145526317 + (TTAA)n Simple_repeat Simple_repeat 3 143 0 2 746 274 243 171 0 chrX 21123997 21124067 -145526229 - RSINE1 SINE B4 -1 164 83 2 746 244 298 90 6 chrX 21124074 21124339 -145525957 + L1ME3A LINE L1 5244 5535 -644 2 746 668 338 20 3 chrX 21124519 21124866 -145525430 - L1MB3 LINE L1 -174 6009 5657 2 746 588 254 27 55 chrX 21124909 21125092 -145525204 + B3A SINE B2 3 180 -18 2 746 631 333 61 18 chrX 21125233 21125511 -145524785 - B4A SINE B4 -2 290 1 2 746 308 337 76 22 chrX 21125542 21125698 -145524598 + L1ME3A LINE L1 5695 5861 -379 2 746 681 45 9 18 chrX 21125698 21125810 -145524486 + L1Md_F2 LINE L1 6472 6582 0 2 746 308 337 76 22 chrX 21125810 21125838 -145524458 + L1ME3A LINE L1 5862 5889 -351 2 746 361 209 77 17 chrX 21125887 21126004 -145524292 - L1M3 LINE L1 -3332 2808 2685 2 746 348 231 0 85 chrX 21126008 21126126 -145524170 - L1M3 LINE L1 -3882 2261 2154 2 746 33 66 0 0 chrX 21126132 21126193 -145524103 + AT_rich Low_complexity Low_complexity 1 61 0 2 746 391 315 45 36 chrX 21126250 21126471 -145523825 + L1ME3A LINE L1 5902 6124 -49 2 746 337 234 0 0 chrX 21126516 21126580 -145523716 + ID4_ SINE ID 6 69 -14 2 746 869 239 20 0 chrX 21126969 21127170 -145523126 + B3 SINE B2 1 205 -11 2 746 479 356 66 33 chrX 21127712 21128078 -145522218 - LTR79 LTR ERVL -64 463 86 2 746 559 298 0 0 chrX 21128075 21128206 -145522090 + ID_B1 SINE B4 81 211 -13 2 746 5547 237 86 13 chrX 21128316 21129659 -145520637 - Lx6 LINE L1 -167 7293 5853 2 746 295 276 140 20 chrX 21129662 21129762 -145520534 - PB1D10 SINE Alu 0 117 6 2 746 2319 167 39 27 chrX 21129877 21130319 -145519977 - RMER19B LTR ERVK 0 902 456 2 746 225 296 10 39 chrX 21130407 21130509 -145519787 - Lx8 LINE L1 -12 7461 7363 2 746 378 281 19 10 chrX 21130520 21130624 -145519672 - Lx8 LINE L1 -162 7311 7207 2 746 406 363 29 29 chrX 21131007 21131214 -145519082 - MIRb SINE MIR -37 231 25 2 746 840 238 114 44 chrX 21131285 21131558 -145518738 - B4A SINE B4 0 292 1 2 746 591 78 48 0 chrX 21132063 21132166 -145518130 + L1Md_F2 LINE L1 6475 6582 0 2 746 207 133 0 0 chrX 21132402 21132447 -145517849 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 2 746 2424 90 59 44 chrX 21132515 21132920 -145517376 - IAPLTR2a LTR ERVK 0 411 1 2 746 31 26 0 0 chrX 21133649 21133687 -145516609 + AT_rich Low_complexity Low_complexity 1 38 0 2 746 381 58 0 0 chrX 21133960 21134012 -145516284 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 746 582 196 9 9 chrX 21134014 21134122 -145516174 + B3 SINE B2 3 110 -106 2 746 207 389 49 78 chrX 21134195 21134479 -145515817 - L2c LINE L2 -76 3311 3036 2 746 211 231 0 0 chrX 21134587 21134626 -145515670 - B1F1 SINE Alu -19 130 92 2 746 472 79 0 62 chrX 21134703 21134784 -145515512 - B2_Mm2 SINE B2 -1 194 119 2 746 1922 172 6 6 chrX 21134784 21135117 -145515179 + Lx4A LINE L1 6725 7057 -1 2 746 189 107 0 0 chrX 21135121 21135149 -145515147 + (A)n Simple_repeat Simple_repeat 1 28 0 2 746 208 188 15 15 chrX 21135260 21135325 -145514971 + CT-rich Low_complexity Low_complexity 3 67 0 2 746 463 340 0 0 chrX 21135386 21135492 -145514804 + B1_Mur1 SINE Alu 43 148 -1 2 746 467 360 43 11 chrX 21135683 21135871 -145514425 + L2 LINE L2 2670 2863 -556 2 746 234 326 91 10 chrX 21136406 21136505 -145513791 - MIRb SINE MIR -64 204 98 2 746 310 342 19 13 chrX 21136660 21136814 -145513482 + MIR SINE MIR 20 174 -88 2 746 236 305 21 10 chrX 21136826 21136922 -145513374 - MTEb LTR MaLR -14 365 269 2 746 405 86 0 0 chrX 21137223 21137281 -145513015 + (CCTA)n Simple_repeat Simple_repeat 1 58 0 2 746 1225 290 10 14 chrX 21137281 21137575 -145512721 - Lx5 LINE L1 -7 7043 6751 2 746 361 257 0 0 chrX 21138382 21138452 -145511844 - ID4 SINE ID -2 81 12 2 746 303 121 0 0 chrX 21139150 21139208 -145511088 + (CAGA)n Simple_repeat Simple_repeat 1 58 0 2 746 399 300 155 30 chrX 21139252 21139523 -145510773 - MER121 Unknown Unknown -38 374 70 2 746 338 171 14 0 chrX 21140146 21140216 -145510080 + GA-rich Low_complexity Low_complexity 2 72 0 2 746 213 311 139 44 chrX 21141501 21141659 -145508637 - MIRc SINE MIR -53 215 43 2 746 303 378 21 5 chrX 21141977 21142166 -145508130 + L3 LINE CR1 4092 4283 -206 2 746 222 37 0 0 chrX 21142196 21142223 -145508073 + (CATA)n Simple_repeat Simple_repeat 2 28 0 2 746 229 311 30 69 chrX 21142537 21142668 -145507628 + L2c LINE L2 3034 3159 -228 2 746 1678 225 39 18 chrX 21145031 21145420 -145504876 + Lx6 LINE L1 7009 7405 -55 2 746 28 0 0 0 chrX 21145475 21145503 -145504793 + AT_rich Low_complexity Low_complexity 1 28 0 2 746 210 37 0 0 chrX 21145999 21146026 -145504270 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 746 248 240 169 0 chrX 21146034 21146111 -145504185 - L1MEb LINE L1 -376 5959 5870 2 746 661 194 194 0 chrX 21146174 21146349 -145503947 - B3 SINE B2 -5 211 3 2 746 545 265 66 117 chrX 21146709 21146970 -145503326 - L1MEb LINE L1 -813 5804 5550 2 746 1037 202 19 19 chrX 21146970 21147182 -145503114 - B3 SINE B2 -4 212 1 2 746 545 265 66 117 chrX 21147182 21147313 -145502983 - L1MEb LINE L1 -1068 5549 5433 2 746 203 200 18 0 chrX 21147472 21147527 -145502769 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 746 2058 221 34 9 chrX 21147527 21147993 -145502303 + Lx2B LINE L1 6512 6989 -11 2 746 62 44 0 0 chrX 21148007 21148097 -145502199 + AT_rich Low_complexity Low_complexity 1 90 0 2 746 393 276 46 23 chrX 21148137 21148311 -145501985 - L1MEb LINE L1 -1074 5245 5068 2 746 242 220 0 0 chrX 21148646 21148696 -145501600 - L1MEb LINE L1 -1401 4918 4869 2 746 513 266 48 0 chrX 21148699 21148823 -145501473 + ID_B1 SINE B4 86 215 -9 2 746 3149 61 5 5 chrX 21148898 21149312 -145500984 - L1_Mus1 LINE L1 -1 6566 6153 2 746 435 256 112 32 chrX 21149326 21149579 -145500717 - L1MEb LINE L1 -1471 4848 4579 2 746 360 284 19 91 chrX 21149793 21150002 -145500294 - L1MA5 LINE L1 -22 6278 6085 2 746 494 231 17 61 chrX 21150174 21150289 -145500007 + PB1D9 SINE Alu 1 110 -10 2 746 330 278 36 51 chrX 21150425 21150644 -145499652 - L1MEb LINE L1 -5204 1105 884 2 746 255 412 0 0 chrX 21151122 21151282 -145499014 - L1MEb LINE L1 -6097 303 144 2 746 1011 250 0 10 chrX 21151307 21151505 -145498791 + B3 SINE B2 20 215 -1 2 746 635 303 24 64 chrX 21151561 21151811 -145498485 + Lx8 LINE L1 6348 6587 -886 2 746 952 307 57 24 chrX 21151803 21152137 -145498159 + Lx8 LINE L1 6972 7316 -157 2 746 263 78 46 15 chrX 21152144 21152209 -145498087 + (TTATA)n Simple_repeat Simple_repeat 5 71 0 2 746 22 70 0 0 chrX 21152214 21152257 -145498039 + AT_rich Low_complexity Low_complexity 1 43 0 2 746 1314 246 90 11 chrX 21153474 21153840 -145496456 - RCHARR1 DNA MER1_type -17 957 563 2 746 315 239 34 0 chrX 21153946 21154034 -145496262 - RCHARR1 DNA MER1_type -397 577 487 2 746 560 284 20 41 chrX 21154053 21154200 -145496096 - RSINE1 SINE B4 0 165 22 2 746 1050 258 113 23 chrX 21154294 21154596 -145495700 - RCHARR1 DNA MER1_type -643 331 3 2 746 245 31 0 0 chrX 21155643 21155675 -145494621 + RLTR9B2 LTR ERVK 1 32 -388 2 746 1033 248 43 28 chrX 21156209 21156491 -145493805 + B4A SINE B4 1 286 -6 2 746 580 143 14 0 chrX 21156549 21156689 -145493607 + GA-rich Low_complexity Low_complexity 1 142 0 2 746 249 254 41 27 chrX 21157413 21157486 -145492810 + MIR3 SINE MIR 90 163 -45 2 746 361 314 138 24 chrX 21157802 21158056 -145492240 - B4A SINE B4 -8 284 2 2 746 270 0 0 0 chrX 21158392 21158422 -145491874 + (T)n Simple_repeat Simple_repeat 1 30 0 2 746 242 266 31 8 chrX 21159312 21159441 -145490855 - Lx9 LINE L1 -29 7615 7484 2 746 2061 340 117 27 chrX 21159505 21160589 -145489707 - Lx8 LINE L1 -228 7245 6053 2 746 992 90 0 7 chrX 21160589 21160735 -145489561 + (TTTC)n Simple_repeat Simple_repeat 2 146 0 2 746 2061 266 73 20 chrX 21160735 21161278 -145489018 - Lx8 LINE L1 -1421 6052 5439 2 746 509 302 15 35 chrX 21161285 21161484 -145488812 - L1MA5 LINE L1 -198 6102 5908 2 746 352 233 0 82 chrX 21161487 21161585 -145488711 + L1MA5A LINE L1 5793 5882 -415 2 746 249 241 17 0 chrX 21161611 21161669 -145488627 + L1MA5A LINE L1 5859 5917 -383 2 746 221 406 103 24 chrX 21162623 21162875 -145487421 + L2c LINE L2 3058 3329 -58 2 746 207 333 45 11 chrX 21163064 21163152 -145487144 + MER5B DNA MER1_type 6 96 -82 2 746 207 227 0 0 chrX 21163724 21163790 -145486506 + (TTA)n Simple_repeat Simple_repeat 2 67 0 2 746 1055 295 78 37 chrX 21163810 21164098 -145486198 - Lx8 LINE L1 -6 7467 7160 2 746 3276 41 5 0 chrX 21164098 21164492 -145485804 + MTA_Mm LTR MaLR 1 396 0 2 746 1055 295 78 37 chrX 21164492 21164689 -145485607 - Lx8 LINE L1 -314 7159 6962 2 746 430 286 241 27 chrX 21164696 21164883 -145485413 - B4A SINE B4 -65 227 1 2 746 262 375 128 57 chrX 21165773 21166070 -145484226 + MLT1J LTR MaLR 193 510 -2 2 746 200 357 124 0 chrX 21166311 21166440 -145483856 + MER5A DNA MER1_type 1 145 -44 2 746 1093 216 106 32 chrX 21167956 21168296 -145482000 + ORR1B2 LTR MaLR 1 365 -2 2 746 1154 180 19 14 chrX 21168642 21168851 -145481445 - B3 SINE B2 -6 210 1 2 746 433 244 0 0 chrX 21168886 21168972 -145481324 + MTE2a LTR MaLR 18 103 -276 2 746 30 0 0 0 chrX 21169168 21169198 -145481098 + AT_rich Low_complexity Low_complexity 1 30 0 2 746 417 20 0 0 chrX 21169201 21169251 -145481045 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 746 308 263 50 40 chrX 21169312 21169411 -145480885 - B3 SINE B2 -111 105 6 2 746 1050 192 75 57 chrX 21169428 21169693 -145480603 - RMER19B LTR ERVK -307 595 326 2 746 362 220 8 92 chrX 21169953 21170073 -145480223 - PB1D10 SINE Alu -7 110 1 2 746 539 200 83 8 chrX 21170143 21170264 -145480032 + B1_Mur1 SINE Alu 6 135 -14 2 746 189 0 0 0 chrX 21170436 21170457 -145479839 + (TTA)n Simple_repeat Simple_repeat 1 21 0 2 746 671 297 113 24 chrX 21170600 21170928 -145479368 + ORR1E LTR MaLR 1 357 -2 2 746 32 0 0 0 chrX 21171332 21171364 -145478932 + AT_rich Low_complexity Low_complexity 1 32 0 2 746 1569 250 48 19 chrX 21171364 21171743 -145478553 + MTD LTR MaLR 30 419 0 2 746 1113 83 0 0 chrX 21172130 21172275 -145478021 + B1_Mus2 SINE Alu 1 145 -2 2 746 279 0 0 0 chrX 21172275 21172306 -145477990 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 746 282 125 0 0 chrX 21172500 21172548 -145477748 + (T)n Simple_repeat Simple_repeat 1 48 0 3 746 497 16 0 0 chrX 21172553 21172616 -145477680 - B1_Mm SINE Alu 0 147 85 3 746 243 0 0 0 chrX 21173618 21173645 -145476651 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 746 1717 261 69 20 chrX 21174195 21174703 -145475593 - Lx8 LINE L1 -2 7471 6939 3 746 340 231 102 0 chrX 21174934 21175042 -145475254 + Lx7 LINE L1 7559 7677 -19 3 746 192 290 138 11 chrX 21175356 21175450 -145474846 - L2b LINE L2 -223 3152 3047 3 746 367 354 15 0 chrX 21176022 21176152 -145474144 - LTR16A LTR ERVL -2 449 318 3 746 579 433 11 25 chrX 21176144 21176497 -145473799 - LTR16A LTR ERVL -100 351 4 3 746 2405 92 46 0 chrX 21176890 21177237 -145473059 + Lx LINE L1 6292 6654 0 3 746 2275 162 48 29 chrX 21177442 21177804 -145472492 - MTC LTR MaLR 0 421 52 3 746 2251 99 9 55 chrX 21177804 21178147 -145472149 - ORR1A2 LTR MaLR 0 327 1 3 746 2275 162 48 29 chrX 21178147 21178197 -145472099 - MTC LTR MaLR -370 51 1 3 746 323 278 25 57 chrX 21178407 21178529 -145471767 + PB1D9 SINE Alu 3 120 0 3 746 33 66 0 0 chrX 21178710 21178771 -145471525 + AT_rich Low_complexity Low_complexity 1 61 0 3 746 397 323 0 41 chrX 21178966 21179137 -145471159 + Lx6 LINE L1 7259 7422 -38 3 746 1095 215 19 45 chrX 21179233 21179501 -145470795 + Lx8 LINE L1 6954 7214 -259 3 746 304 309 62 31 chrX 21179532 21179629 -145470667 + RSINE1 SINE B4 44 143 -22 3 746 23 0 0 0 chrX 21179659 21179682 -145470614 + AT_rich Low_complexity Low_complexity 1 23 0 3 746 285 292 65 14 chrX 21179701 21179840 -145470456 + MIR SINE MIR 73 218 -44 3 746 234 0 0 0 chrX 21179861 21179887 -145470409 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 3 746 327 275 149 32 chrX 21180222 21180376 -145469920 + L1MA6 LINE L1 4810 4981 -1162 3 746 34 55 0 0 chrX 21180479 21180534 -145469762 + AT_rich Low_complexity Low_complexity 1 55 0 3 746 1085 108 0 0 chrX 21180659 21180807 -145469489 + B1_Mus1 SINE Alu 1 148 0 3 746 215 73 49 0 chrX 21180809 21180850 -145469446 + (CAAAA)n Simple_repeat Simple_repeat 1 43 0 3 746 416 203 131 27 chrX 21180894 21181108 -145469188 + L1MA6 LINE L1 5165 5416 -773 3 746 400 295 0 19 chrX 21181147 21181254 -145469042 + B1F SINE Alu 38 142 -7 3 746 1478 274 66 94 chrX 21181358 21181495 -145468801 + Lx9 LINE L1 6761 6866 -778 3 746 905 90 0 0 chrX 21181495 21181628 -145468668 - L1_Mus2 LINE L1 0 6566 6434 3 746 1478 274 66 94 chrX 21181628 21182206 -145468090 + Lx9 LINE L1 6867 7456 -188 3 746 426 91 26 13 chrX 21182246 21182324 -145467972 + (CA)n Simple_repeat Simple_repeat 2 80 0 3 746 2753 66 0 3 chrX 21182342 21182707 -145467589 - L1Md_F2 LINE L1 -1 6581 6218 3 746 234 322 64 56 chrX 21182711 21182836 -145467460 + ID_B1 SINE B4 97 222 -2 3 746 286 221 0 0 chrX 21182846 21182923 -145467373 + A-rich Low_complexity Low_complexity 1 77 0 3 746 341 218 64 0 chrX 21182959 21183037 -145467259 + Lx8 LINE L1 6299 6381 -1092 3 746 189 0 0 0 chrX 21183060 21183081 -145467215 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 746 612 27 0 0 chrX 21183081 21183154 -145467142 + (GA)n Simple_repeat Simple_repeat 1 74 0 3 746 1068 63 34 20 chrX 21183216 21183362 -145466934 + B1_Mus1 SINE Alu 1 148 0 3 746 9300 112 17 31 chrX 21183489 21185031 -145465265 + Lx2A LINE L1 5492 7008 0 3 746 603 209 27 0 chrX 21185385 21185495 -145464801 + B1F2 SINE Alu 31 143 -6 3 746 428 281 182 35 chrX 21185497 21186190 -145464106 + L1MA6 LINE L1 5481 6293 -7 3 746 369 292 0 69 chrX 21186205 21186307 -145463989 + ID4 SINE ID 5 99 -53 3 746 1723 143 36 3 chrX 21186548 21186849 -145463447 + L1_Mur2 LINE L1 4967 5277 -600 3 746 1495 260 152 22 chrX 21186899 21187447 -145462849 + Lx8 LINE L1 6855 7473 0 3 746 3740 186 40 20 chrX 21188471 21188942 -145461354 + Lx4B LINE L1 6289 6759 -299 3 746 2841 106 72 0 chrX 21188942 21189385 -145460911 - IAPLTR2_Mm LTR ERVK 0 475 1 3 746 3740 186 40 20 chrX 21189385 21189663 -145460633 + Lx4B LINE L1 6760 7053 -5 3 746 225 0 0 0 chrX 21190347 21190372 -145459924 + (TC)n Simple_repeat Simple_repeat 2 26 0 3 746 348 24 0 0 chrX 21190372 21190412 -145459884 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 746 24 32 0 0 chrX 21190440 21190471 -145459825 + AT_rich Low_complexity Low_complexity 1 31 0 3 746 857 306 56 0 chrX 21190667 21190919 -145459377 - MLT1E2 LTR MaLR 0 627 362 3 746 334 242 22 11 chrX 21191411 21191503 -145458793 - MLT1E2 LTR MaLR -440 187 95 3 746 451 204 147 0 chrX 21191504 21191661 -145458635 - Lx9 LINE L1 -33 7611 7432 3 746 326 280 9 18 chrX 21191682 21191791 -145458505 - Lx9 LINE L1 -594 7050 6943 3 746 279 253 53 7 chrX 21191800 21191951 -145458345 + (TATAA)n Simple_repeat Simple_repeat 1 158 0 3 746 342 0 0 0 chrX 21192187 21192225 -145458071 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 746 352 258 126 15 chrX 21192227 21192360 -145457936 - B4 SINE B4 -67 225 70 3 746 479 260 118 0 chrX 21192432 21192559 -145457737 + B1_Mur2 SINE Alu 2 143 -6 3 746 929 99 14 0 chrX 21193071 21193213 -145457083 + (TTTC)n Simple_repeat Simple_repeat 1 144 0 3 746 321 290 123 15 chrX 21193344 21193477 -145456819 - MIRb SINE MIR -134 134 1 3 746 260 0 0 54 chrX 21193477 21193514 -145456782 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 3 746 228 267 0 32 chrX 21193927 21193989 -145456307 - ID SINE ID -164 60 1 3 746 413 315 58 50 chrX 21194298 21194603 -145455693 - L2b LINE L2 -243 3132 2828 3 746 693 264 62 7 chrX 21194731 21194876 -145455420 + RSINE1 SINE B4 8 160 -5 3 746 450 0 0 0 chrX 21194965 21195015 -145455281 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 746 378 254 120 41 chrX 21195720 21195987 -145454309 - Lx9 LINE L1 0 7644 7357 3 746 2030 74 31 16 chrX 21195993 21196310 -145453986 + RLTRETN_Mm LTR ERVK 1 322 0 3 746 25919 78 16 14 chrX 21196310 21202719 -145447577 + MMETn-int LTR ERVK 1 7124 -282 3 746 2030 74 31 16 chrX 21202719 21203036 -145447260 + RLTRETN_Mm LTR ERVK 1 322 0 3 746 195 42 0 0 chrX 21203045 21203069 -145447227 + (TC)n Simple_repeat Simple_repeat 1 24 0 3 746 298 225 37 24 chrX 21203123 21203205 -145447091 + Lx9 LINE L1 7188 7270 -374 3 746 350 198 21 0 chrX 21203270 21203366 -145446930 + Lx9 LINE L1 7538 7635 -9 3 746 267 160 120 0 chrX 21203539 21203614 -145446682 - Lx9 LINE L1 -137 7507 7424 3 746 2316 192 11 74 chrX 21203620 21204148 -145446148 + L1_Rod LINE L1 5279 5773 -74 3 746 444 246 52 44 chrX 21204728 21204864 -145445432 + B1F SINE Alu 12 148 -1 3 746 393 22 0 0 chrX 21204925 21204971 -145445325 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 746 291 308 95 51 chrX 21205354 21205491 -145444805 - MamSINE1 SINE tRNA -43 247 105 3 746 254 297 81 0 chrX 21205523 21205597 -145444699 + MIRb SINE MIR 26 105 -163 3 746 613 326 14 7 chrX 21205658 21205803 -145444493 + RSINE1 SINE B4 3 148 -17 3 746 24 0 0 0 chrX 21206256 21206280 -145444016 + AT_rich Low_complexity Low_complexity 1 24 0 3 746 5428 74 5 4 chrX 21206310 21206339 -145443957 - L1Md_F2 LINE L1 0 6582 6552 3 746 1602 31 11 0 chrX 21206339 21206530 -145443766 - B2_Mm1a SINE B2 0 193 1 3 746 5428 74 5 4 chrX 21206530 21207242 -145443054 - L1Md_F2 LINE L1 -31 6551 5840 3 746 188 304 66 38 chrX 21207781 21207887 -145442409 - MIR SINE MIR -12 250 142 3 746 605 83 205 36 chrX 21208237 21208349 -145441947 - B1_Mus1 SINE Alu 0 148 18 3 746 212 212 264 96 chrX 21208243 21208368 -145441928 - B4 SINE B4 -68 224 79 3 746 665 124 66 8 chrX 21208374 21208496 -145441800 - L1_Mus3 LINE L1 -46 6592 6464 3 746 1007 235 73 9 chrX 21209024 21209256 -145441040 - Lx5 LINE L1 -1 7049 6803 3 746 1175 290 92 61 chrX 21209728 21210033 -145440263 - L1MB2 LINE L1 -3 6168 5835 3 746 332 296 62 39 chrX 21210033 21210163 -145440133 + B1F SINE Alu 2 134 -15 3 746 1175 290 92 61 chrX 21210163 21210566 -145439730 - L1MB2 LINE L1 -337 5834 5438 3 746 32 57 0 0 chrX 21210655 21210708 -145439588 + AT_rich Low_complexity Low_complexity 1 53 0 3 746 267 276 13 3 chrX 21210770 21210864 -145439432 - L1MB2 LINE L1 -792 5379 5286 3 746 229 0 0 0 chrX 21210879 21210913 -145439383 + L1_Mus2 LINE L1 6532 6565 -1 3 746 209 57 0 28 chrX 21211283 21211319 -145438977 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 3 746 971 110 7 33 chrX 21211320 21211471 -145438825 - B1_Mm SINE Alu 0 147 1 3 746 516 265 48 101 chrX 21211322 21211490 -145438806 - B4 SINE B4 -69 223 65 3 746 2376 299 33 23 chrX 21211579 21212397 -145437899 - Lx9 LINE L1 -452 7192 6367 3 746 540 0 0 0 chrX 21212419 21212479 -145437817 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 746 303 288 108 52 chrX 21212665 21212810 -145437486 + Lx9 LINE L1 7339 7500 -144 3 746 399 41 0 0 chrX 21212810 21212859 -145437437 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 746 303 288 108 52 chrX 21212859 21212999 -145437297 + Lx9 LINE L1 7501 7640 -4 3 746 27 29 0 0 chrX 21213003 21213037 -145437259 + AT_rich Low_complexity Low_complexity 1 34 0 3 746 340 350 0 0 chrX 21213173 21213276 -145437020 + PB1D7 SINE Alu 13 115 -5 3 746 468 35 0 0 chrX 21213323 21213381 -145436915 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 746 348 312 147 60 chrX 21213646 21213898 -145436398 - B4 SINE B4 -18 274 1 3 746 387 0 0 0 chrX 21214187 21214230 -145436066 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 746 456 19 0 0 chrX 21214406 21214459 -145435837 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 746 706 98 161 70 chrX 21214842 21214985 -145435311 + RMER19B LTR ERVK 747 902 0 3 746 189 0 0 0 chrX 21215517 21215538 -145434758 + (A)n Simple_repeat Simple_repeat 1 21 0 3 746 5702 75 4 0 chrX 21215734 21216483 -145433813 - L1_Mus2 LINE L1 -57 5826 5075 3 746 5534 75 0 1 chrX 21216483 21217206 -145433090 + L1_Mus2 LINE L1 5845 6566 0 3 746 240 137 0 0 chrX 21217808 21217859 -145432437 + (TATATG)n Simple_repeat Simple_repeat 3 53 0 3 746 273 310 46 0 chrX 21217930 21218017 -145432279 - L2a LINE L2 -3 3423 3333 3 746 351 0 0 0 chrX 21218200 21218239 -145432057 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 746 256 190 0 0 chrX 21218472 21218530 -145431766 + A-rich Low_complexity Low_complexity 1 58 0 3 746 23 33 0 0 chrX 21218816 21218846 -145431450 + AT_rich Low_complexity Low_complexity 1 30 0 3 746 798 314 11 20 chrX 21218859 21219207 -145431089 + L1MA6 LINE L1 5643 5987 -313 4 746 2759 207 116 29 chrX 21219276 21219329 -145430967 - Lx7 LINE L1 -768 6928 6887 4 746 422 18 18 0 chrX 21219329 21219384 -145430912 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 746 2759 207 116 29 chrX 21219384 21219976 -145430320 - Lx7 LINE L1 -810 6886 6227 4 746 315 71 0 0 chrX 21220020 21220062 -145430234 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 746 3817 63 0 0 chrX 21220245 21220720 -145429576 + MT2C_Mm LTR ERVL 1 475 0 4 746 698 302 97 75 chrX 21220864 21221143 -145429153 - B4A SINE B4 0 292 8 4 746 942 305 22 122 chrX 21221280 21221642 -145428654 + MTEb LTR MaLR 1 326 -53 4 746 38 39 0 0 chrX 21221679 21221731 -145428565 + AT_rich Low_complexity Low_complexity 1 52 0 4 746 268 297 102 0 chrX 21221731 21221849 -145428447 + MTEb LTR MaLR 240 369 -10 4 746 441 0 0 0 chrX 21221917 21221966 -145428330 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 746 198 71 0 0 chrX 21223286 21223314 -145426982 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 4 746 232 298 180 5 chrX 21223396 21223523 -145426773 - MIR SINE MIR -33 235 81 4 746 278 247 27 0 chrX 21224485 21224631 -145425665 + (TCTA)n Simple_repeat Simple_repeat 2 151 0 4 746 327 228 0 0 chrX 21224673 21224765 -145425531 + (TCTG)n Simple_repeat Simple_repeat 3 94 0 4 746 1579 152 88 19 chrX 21224769 21225077 -145425219 - ORR1A4 LTR MaLR 0 329 1 4 746 7384 81 4 24 chrX 21225260 21226132 -145424164 - RLTR13D5 LTR ERVK 0 1023 161 4 746 1546 65 0 0 chrX 21226132 21226331 -145423965 + L1_Mus1 LINE L1 6369 6567 0 4 746 7384 81 4 24 chrX 21226331 21226502 -145423794 - RLTR13D5 LTR ERVK -863 160 1 4 746 462 337 87 26 chrX 21226577 21226772 -145423524 - B4A SINE B4 -64 228 22 4 746 188 67 33 0 chrX 21226893 21226923 -145423373 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 746 369 0 0 0 chrX 21226956 21226997 -145423299 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 746 521 302 125 0 chrX 21227055 21227247 -145423049 - ID_B1 SINE B4 -5 219 4 4 746 300 83 0 0 chrX 21227265 21227313 -145422983 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 4 746 1194 48 0 0 chrX 21227314 21227459 -145422837 - B1_Mus2 SINE Alu -2 145 1 4 746 408 361 0 0 chrX 21228030 21228163 -145422133 + ID_B1 SINE B4 84 216 -8 4 746 315 0 0 0 chrX 21228164 21228199 -145422097 + (TAAAA)n Simple_repeat Simple_repeat 4 38 0 4 746 242 356 9 46 chrX 21229192 21229301 -145420995 - MIR SINE MIR -83 125 21 4 746 292 354 20 53 chrX 21229519 21229558 -145420738 - B1_Mur3 SINE Alu 0 147 31 4 746 408 286 19 0 chrX 21229558 21229663 -145420633 - ID_B1 SINE B4 -28 196 90 4 746 576 293 97 14 chrX 21229689 21230039 -145420257 - L1MEc LINE L1 -3946 2454 2076 4 746 268 263 30 143 chrX 21230138 21230179 -145420117 + B1_Mur1 SINE Alu 30 143 -2 4 746 416 198 0 80 chrX 21230179 21230267 -145420029 + ID_B1 SINE B4 138 218 -6 4 746 349 309 102 8 chrX 21230302 21230429 -145419867 + RSINE1 SINE B4 3 141 -24 4 746 363 145 0 0 chrX 21230471 21230554 -145419742 + (TC)n Simple_repeat Simple_repeat 1 83 0 4 746 285 118 0 0 chrX 21230556 21230607 -145419689 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 746 205 186 0 0 chrX 21230754 21230797 -145419499 + T-rich Low_complexity Low_complexity 1 43 0 4 746 438 20 0 0 chrX 21230879 21230930 -145419366 + (TATG)n Simple_repeat Simple_repeat 2 52 0 4 746 373 341 39 8 chrX 21231093 21231223 -145419073 - B4A SINE B4 -158 134 1 4 746 2494 152 77 116 chrX 21231248 21231461 -145418835 + RLTR20A2 LTR ERVK 5 168 -410 4 746 1638 180 26 55 chrX 21231461 21231883 -145418413 - RMER17C LTR ERVK 0 410 1 4 746 2494 152 77 116 chrX 21231883 21232192 -145418104 + RLTR20A2 LTR ERVK 169 479 -99 4 746 417 20 0 0 chrX 21232192 21232242 -145418054 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 746 2494 152 77 116 chrX 21232242 21232315 -145417981 + RLTR20A2 LTR ERVK 480 577 -1 4 746 293 274 67 20 chrX 21232318 21232467 -145417829 - L1MEc LINE L1 -5222 1178 1023 4 746 388 281 25 66 chrX 21232468 21232590 -145417706 - PB1D10 SINE Alu 0 117 1 4 746 426 39 0 0 chrX 21232594 21232646 -145417650 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 746 24 0 0 0 chrX 21232647 21232671 -145417625 + AT_rich Low_complexity Low_complexity 1 24 0 4 746 371 280 103 8 chrX 21232706 21232832 -145417464 - B1_Mur1 SINE Alu -10 139 2 4 746 2099 178 50 10 chrX 21233014 21233417 -145416879 + MTD LTR MaLR 1 419 0 4 747 198 191 0 0 chrX 21234008 21234050 -145416246 + T-rich Low_complexity Low_complexity 1 42 0 4 747 281 296 0 20 chrX 21234099 21234199 -145416097 + CT-rich Low_complexity Low_complexity 1 98 0 4 747 361 361 25 0 chrX 21234217 21234336 -145415960 - B1F SINE Alu -2 147 26 4 747 184 304 0 0 chrX 21234336 21234382 -145415914 + MIR3 SINE MIR 152 197 -11 4 747 2475 41 0 0 chrX 21234393 21234687 -145415609 + L1Md_F2 LINE L1 5292 5585 -298 4 747 8022 48 4 1 chrX 21234688 21235677 -145414619 + L1Md_F2 LINE L1 5587 6578 -4 4 747 1889 73 0 0 chrX 21235773 21236021 -145414275 - L1_Mus1 LINE L1 -348 6219 5972 4 747 2634 76 3 6 chrX 21236021 21236377 -145413919 + L1_Mus1 LINE L1 6212 6566 -1 4 747 721 249 66 47 chrX 21236426 21236637 -145413659 + B3 SINE B2 2 216 0 4 747 456 348 11 63 chrX 21236854 21237044 -145413252 + ID_B1 SINE B4 6 185 -39 4 747 426 237 8 25 chrX 21237152 21237273 -145413023 - L1MB8 LINE L1 -21 6157 6039 4 747 24 0 0 0 chrX 21237350 21237374 -145412922 + AT_rich Low_complexity Low_complexity 1 24 0 4 747 315 0 0 0 chrX 21237590 21237625 -145412671 + (TTAA)n Simple_repeat Simple_repeat 2 36 0 4 747 1152 93 6 0 chrX 21237625 21237786 -145412510 - B2_Mm1t SINE B2 -31 162 1 4 747 571 304 69 34 chrX 21237804 21238008 -145412288 - B3 SINE B2 -5 211 1 4 747 22 35 0 0 chrX 21238617 21238646 -145411650 + AT_rich Low_complexity Low_complexity 1 29 0 4 747 333 247 0 23 chrX 21239093 21239180 -145411116 + MER5A1 DNA MER1_type 79 163 -3 4 747 26 30 0 0 chrX 21239505 21239538 -145410758 + AT_rich Low_complexity Low_complexity 1 33 0 4 747 373 305 49 14 chrX 21239557 21239700 -145410596 - RSINE1 SINE B4 -15 150 3 4 747 1226 111 21 10 chrX 21239703 21239895 -145410401 - B2_Mm2 SINE B2 -1 194 1 4 747 21 0 0 0 chrX 21239975 21239996 -145410300 + AT_rich Low_complexity Low_complexity 1 21 0 4 747 393 207 0 0 chrX 21239996 21240083 -145410213 + (TG)n Simple_repeat Simple_repeat 2 88 0 4 747 667 129 24 0 chrX 21240205 21240329 -145409967 + Lx2 LINE L1 6868 6994 -3 4 747 1191 55 0 0 chrX 21240451 21240597 -145409699 + B1_Mm SINE Alu 2 147 0 4 747 1249 258 126 29 chrX 21240796 21241007 -145409289 - L1MA7 LINE L1 -174 6126 5886 4 747 1592 20 5 10 chrX 21241007 21241208 -145409088 - L1Md_F2 LINE L1 -1 6581 6382 4 747 1249 257 151 25 chrX 21241208 21241707 -145408589 - L1MA7 LINE L1 -406 5885 5315 4 747 523 316 46 23 chrX 21241782 21241999 -145408297 + ID_B1 SINE B4 1 222 -2 4 747 949 328 62 3 chrX 21242166 21242524 -145407772 - Lx8 LINE L1 -234 7239 6861 4 747 553 290 15 20 chrX 21242960 21243157 -145407139 - B3A SINE B2 0 198 3 4 747 256 346 39 0 chrX 21243949 21244027 -145406269 + ID4 SINE ID 3 83 0 4 747 615 294 0 56 chrX 21244052 21244214 -145406082 + ID_B1 SINE B4 4 156 -68 4 747 391 214 38 45 chrX 21244216 21244348 -145405948 - L1MA8 LINE L1 -21 6270 6140 4 747 508 294 8 0 chrX 21244378 21244497 -145405799 + B1_Mur2 SINE Alu 11 130 -19 4 747 479 256 60 0 chrX 21244559 21244692 -145405604 + B1F SINE Alu 9 149 0 4 747 2028 190 110 17 chrX 21244798 21245473 -145404823 - RMER6A LTR ERVK 0 756 25 4 747 204 40 0 0 chrX 21245494 21245519 -145404777 + (TC)n Simple_repeat Simple_repeat 2 26 0 4 747 293 299 10 49 chrX 21245547 21245649 -145404647 + Lx8 LINE L1 7178 7275 -198 4 747 3633 138 92 16 chrX 21246130 21246758 -145403538 + RLTR33 LTR ERVK 3 678 0 4 747 730 265 58 10 chrX 21246772 21246978 -145403318 + ID_B1 SINE B4 2 217 -7 4 747 289 95 0 31 chrX 21247734 21247799 -145402497 + (CAAAAA)n Simple_repeat Simple_repeat 3 65 0 4 747 318 236 181 19 chrX 21248306 21248466 -145401830 + Charlie1a DNA MER1_type 1239 1424 -31 4 747 282 336 159 0 chrX 21248866 21248973 -145401323 + RSINE1 SINE B4 16 139 -26 4 747 449 287 27 18 chrX 21249023 21249133 -145401163 - PB1D7 SINE Alu -5 115 5 4 747 611 227 97 70 chrX 21249274 21249435 -145400861 + ID_B1 SINE B4 5 170 -54 4 747 1728 69 9 0 chrX 21249435 21249666 -145400630 + L1_Mus3 LINE L1 6400 6632 -6 4 747 611 227 97 70 chrX 21249666 21249689 -145400607 + ID_B1 SINE B4 171 193 -31 4 747 450 65 0 0 chrX 21249732 21249794 -145400502 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 747 420 20 0 0 chrX 21249794 21249842 -145400454 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 747 907 236 19 33 chrX 21249967 21250177 -145400119 + B3 SINE B2 5 211 -5 4 747 2427 80 23 12 chrX 21250599 21250942 -145399354 - Lx2 LINE L1 -6 6991 6645 4 747 236 320 20 40 chrX 21251325 21251426 -145398870 + MIRb SINE MIR 86 184 -84 4 747 2929 67 41 3 chrX 21251661 21252051 -145398245 + L1Md_F2 LINE L1 6178 6582 0 4 747 414 0 0 0 chrX 21252148 21252194 -145398102 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 747 338 339 35 0 chrX 21252549 21252664 -145397632 - PB1D7 SINE Alu -1 119 1 4 747 338 370 71 0 chrX 21252949 21253103 -145397193 + LTR88c LTR Genie? 251 415 -447 4 747 351 0 0 0 chrX 21253358 21253397 -145396899 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 747 195 42 0 0 chrX 21253996 21254020 -145396276 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4 747 432 214 110 20 chrX 21254420 21254520 -145395776 - B1F SINE Alu -31 118 10 4 747 1584 183 4 0 chrX 21254710 21254983 -145395313 - L1_Mur3 LINE L1 -181 5699 5426 5 747 1081 149 0 21 chrX 21254983 21255175 -145395121 - L1_Mur3 LINE L1 -1724 4156 3969 5 747 7446 107 18 6 chrX 21255196 21256489 -145393807 - Lx LINE L1 0 6654 5345 5 747 7241 166 47 111 chrX 21256481 21257920 -145392376 - L1_Mur3 LINE L1 -2425 3455 2104 5 747 2310 165 187 46 chrX 21257920 21258523 -145391773 + RMER6C LTR ERVK 3 690 0 5 747 7241 166 47 111 chrX 21258523 21258546 -145391750 - L1_Mur3 LINE L1 -3777 2103 2096 5 747 1321 60 39 0 chrX 21258546 21258728 -145391568 - B2_Mm2 SINE B2 -6 189 1 5 747 7241 166 47 111 chrX 21258728 21259337 -145390959 - L1_Mur3 LINE L1 -3785 2095 1516 5 747 342 0 0 0 chrX 21259337 21259375 -145390921 + (CTG)n Simple_repeat Simple_repeat 2 39 0 5 747 1284 89 0 0 chrX 21259375 21259554 -145390742 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 5 747 7241 166 47 111 chrX 21259554 21259592 -145390704 - L1_Mur3 LINE L1 -4365 1515 1479 5 747 263 322 91 52 chrX 21259983 21260137 -145390159 - MER5B DNA MER1_type -4 174 15 5 747 297 328 122 10 chrX 21260291 21260593 -145389703 - L1ME2 LINE L1 -66 6098 5763 5 747 362 204 11 0 chrX 21260601 21260694 -145389602 + (TA)n Simple_repeat Simple_repeat 2 95 0 5 747 513 0 0 0 chrX 21260914 21260971 -145389325 + (TTTC)n Simple_repeat Simple_repeat 1 57 0 5 747 663 190 48 21 chrX 21260971 21261116 -145389180 - Lx4A LINE L1 -7 7051 6903 5 747 2760 219 102 17 chrX 21261475 21262308 -145387988 - Lx3C LINE L1 -8 7050 6066 5 747 2840 154 3 10 chrX 21262306 21263029 -145387267 + Lx4B LINE L1 5372 6039 -1019 5 747 659 99 10 0 chrX 21263105 21263206 -145387090 + (CATATA)n Simple_repeat Simple_repeat 4 105 0 5 747 26 50 0 0 chrX 21263475 21263515 -145386781 + AT_rich Low_complexity Low_complexity 1 40 0 5 747 227 229 43 0 chrX 21263554 21263624 -145386672 - L1MA8 LINE L1 -134 6157 6085 5 747 630 153 0 0 chrX 21263799 21263910 -145386386 + (TCTA)n Simple_repeat Simple_repeat 4 114 0 5 747 282 279 0 29 chrX 21263927 21263997 -145386299 - RSINE1 SINE B4 -96 69 2 5 747 414 0 0 0 chrX 21264005 21264051 -145386245 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 747 480 246 192 0 chrX 21264199 21264329 -145385967 - RSINE1 SINE B4 0 165 11 5 747 411 144 0 0 chrX 21264420 21264517 -145385779 + (TCTG)n Simple_repeat Simple_repeat 4 100 0 5 747 261 254 0 141 chrX 21264530 21264608 -145385688 - ID4_ SINE ID -85 67 1 5 747 262 122 0 0 chrX 21264617 21264658 -145385638 - L1M2 LINE L1 -478 5813 5773 5 747 456 67 0 0 chrX 21264860 21264920 -145385376 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 747 272 335 51 46 chrX 21264950 21265147 -145385149 - B3A SINE B2 0 198 1 5 747 739 262 0 79 chrX 21264970 21265148 -145385148 - RSINE1 SINE B4 0 165 2 5 747 291 355 100 87 chrX 21265364 21265605 -145384691 - LTR33 LTR ERVL 0 515 272 5 747 1000 139 12 0 chrX 21265943 21266109 -145384187 - URR1A DNA MER1_type 0 226 59 5 747 281 364 86 15 chrX 21266165 21266363 -145383933 - ID_B1 SINE B4 -11 213 2 5 747 230 273 78 0 chrX 21266469 21266546 -145383750 - MER2 DNA MER2_type -170 175 93 5 747 495 286 0 15 chrX 21266859 21266994 -145383302 + B1F SINE Alu 5 137 -12 5 747 315 143 39 13 chrX 21267775 21267853 -145382443 + CT-rich Low_complexity Low_complexity 1 80 0 5 747 27 49 0 0 chrX 21267984 21268025 -145382271 + AT_rich Low_complexity Low_complexity 1 41 0 5 747 1122 48 0 46 chrX 21268653 21268805 -145381491 - B1_Mm SINE Alu -1 146 2 5 747 536 37 0 36 chrX 21268811 21268895 -145381401 + L1Md_F2 LINE L1 6492 6572 -10 5 747 24 53 0 0 chrX 21268895 21268933 -145381363 + AT_rich Low_complexity Low_complexity 1 38 0 5 747 262 249 164 71 chrX 21268998 21269266 -145381030 + L1ME3A LINE L1 3775 4067 -2079 5 747 240 200 160 9 chrX 21269321 21269427 -145380869 + L1ME3A LINE L1 4134 4255 -1891 5 747 835 221 66 15 chrX 21269532 21269730 -145380566 - B3 SINE B2 -6 210 3 5 747 611 252 14 36 chrX 21269730 21269870 -145380426 + B1_Mur1 SINE Alu 10 146 -3 5 747 592 77 11 0 chrX 21269938 21270029 -145380267 - L1_Mus2 LINE L1 -1 6565 6474 5 747 286 359 27 22 chrX 21270039 21270264 -145380032 + L1ME3A LINE L1 4801 5026 -1120 5 747 305 332 12 9 chrX 21270286 21270399 -145379897 - B1F SINE Alu -3 114 1 5 747 241 259 93 0 chrX 21270457 21270511 -145379785 - tRNA-Ala-GCA tRNA tRNA -3 72 14 5 747 712 272 37 12 chrX 21270591 21270755 -145379541 + B3A SINE B2 1 168 -30 5 747 439 330 124 37 chrX 21270788 21271386 -145378910 + L1ME3A LINE L1 5477 6126 -47 5 747 219 139 0 0 chrX 21271446 21271482 -145378814 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 747 439 311 22 7 chrX 21271500 21271636 -145378660 - B1F SINE Alu -10 139 2 5 747 363 78 0 0 chrX 21271704 21271755 -145378541 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 747 420 20 0 0 chrX 21271755 21271804 -145378492 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 747 379 320 0 0 chrX 21271804 21271907 -145378389 - RSINE1 SINE B4 -26 139 37 5 747 758 109 8 0 chrX 21272103 21272298 -145377998 + L1_Mus4 LINE L1 6496 6636 0 5 747 232 267 233 19 chrX 21273426 21273529 -145376767 - MIR SINE MIR -82 180 56 5 747 22 0 0 0 chrX 21273587 21273609 -145376687 + AT_rich Low_complexity Low_complexity 1 22 0 5 747 452 296 0 0 chrX 21273635 21273743 -145376553 - PB1D10 SINE Alu -3 114 7 5 747 511 287 25 0 chrX 21273907 21274029 -145376267 - B1F SINE Alu -11 138 14 5 747 225 154 0 0 chrX 21274154 21274193 -145376103 + CT-rich Low_complexity Low_complexity 2 40 0 5 747 868 204 0 0 chrX 21274194 21274336 -145375960 - B1_Mur2 SINE Alu -5 144 3 5 747 343 291 5 145 chrX 21274535 21274728 -145375568 + MER20 DNA MER1_type 1 166 -53 5 747 510 242 83 0 chrX 21274737 21274894 -145375402 + L1MA9 LINE L1 5990 6159 -153 5 747 182 91 30 0 chrX 21274907 21274940 -145375356 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 5 747 337 283 139 85 chrX 21274979 21275296 -145375000 - MLT1A0 LTR MaLR 0 408 25 5 747 365 267 22 0 chrX 21275397 21275487 -145374809 - MLT1A1 LTR MaLR -291 117 26 5 747 1180 62 0 0 chrX 21275661 21275806 -145374490 + B1_Mus1 SINE Alu 1 145 -3 5 747 342 0 0 0 chrX 21275806 21275844 -145374452 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 5 747 374 319 7 43 chrX 21276582 21276599 -145373697 - ID_B1 SINE B4 0 224 89 5 747 633 242 0 0 chrX 21276599 21276723 -145373573 - B1_Mur2 SINE Alu -18 131 8 5 747 215 245 0 39 chrX 21276825 21276876 -145373420 + MIRc SINE MIR 95 143 -125 5 747 242 338 0 25 chrX 21277228 21277307 -145372989 + PB1D10 SINE Alu 36 112 -5 5 747 1504 126 30 15 chrX 21277419 21277685 -145372611 + L1_Mus4 LINE L1 6361 6630 -6 5 747 1154 62 7 0 chrX 21277856 21278002 -145372294 + B1_Mus2 SINE Alu 1 147 0 5 747 269 272 116 107 chrX 21278097 21278207 -145372089 - B1F SINE Alu -5 115 6 5 747 976 270 93 18 chrX 21278740 21279128 -145371168 + Lx7 LINE L1 6870 7286 -410 5 747 349 274 66 16 chrX 21279179 21279361 -145370935 + Lx7 LINE L1 7506 7696 0 5 747 300 225 100 0 chrX 21279579 21279659 -145370637 + B4A SINE B4 82 169 -123 5 747 457 167 83 0 chrX 21279589 21279685 -145370611 + PB1D9 SINE Alu 7 110 -10 5 747 4743 42 0 2 chrX 21279910 21280487 -145369809 + L1Md_F3 LINE L1 5995 6570 -14 5 747 298 261 34 51 chrX 21281073 21281190 -145369106 + RLTR23 LTR ERV1 316 430 0 5 747 296 183 50 0 chrX 21281196 21281256 -145369040 - ID_B1 SINE B4 -39 185 123 5 747 780 251 43 32 chrX 21281336 21281521 -145368775 - B3 SINE B2 -23 193 7 5 747 183 162 0 0 chrX 21281993 21282030 -145368266 + T-rich Low_complexity Low_complexity 1 37 0 5 747 2137 102 22 117 chrX 21282037 21282447 -145367849 - Lx2A LINE L1 -9 6999 6629 5 747 21 0 0 0 chrX 21282616 21282637 -145367659 + AT_rich Low_complexity Low_complexity 1 21 0 5 747 554 326 0 5 chrX 21283096 21283284 -145367012 - B3A SINE B2 -10 188 2 5 747 351 60 0 0 chrX 21284289 21284339 -145365957 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 747 207 0 0 0 chrX 21284339 21284362 -145365934 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 747 461 261 0 70 chrX 21284559 21284687 -145365609 - PB1D9 SINE Alu -1 119 1 5 747 765 214 149 25 chrX 21284717 21284952 -145365344 + Lx4B LINE L1 6735 7053 -5 5 747 299 317 15 104 chrX 21285114 21285248 -145365048 + PB1 SINE Alu 3 124 -3 5 747 201 158 0 0 chrX 21285377 21285415 -145364881 + T-rich Low_complexity Low_complexity 1 38 0 5 747 454 267 206 0 chrX 21285585 21285765 -145364531 + ID_B1 SINE B4 4 220 -4 5 747 950 74 89 0 chrX 21286772 21286907 -145363389 + B1_Mm SINE Alu 1 147 0 5 747 212 286 44 71 chrX 21287058 21287171 -145363125 + MIR SINE MIR 79 188 -74 5 747 210 347 52 26 chrX 21288682 21288759 -145361537 + B3A SINE B2 93 171 -27 5 747 23 68 0 0 chrX 21288762 21288806 -145361490 + AT_rich Low_complexity Low_complexity 1 44 0 5 747 434 99 25 0 chrX 21289314 21289395 -145360901 + (TCTCTG)n Simple_repeat Simple_repeat 2 84 0 5 747 578 335 0 0 chrX 21289402 21289554 -145360742 - RSINE1 SINE B4 -6 159 8 5 747 243 0 0 0 chrX 21289690 21289717 -145360579 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 5 747 660 246 0 16 chrX 21289750 21289874 -145360422 - B3A SINE B2 -75 123 2 5 747 452 341 7 0 chrX 21289949 21290084 -145360212 - ID_B1 SINE B4 0 224 89 5 747 417 20 0 0 chrX 21290949 21290999 -145359297 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 747 674 107 63 0 chrX 21292707 21292866 -145357430 + GA-rich Low_complexity Low_complexity 1 169 0 5 747 412 162 67 13 chrX 21293153 21293228 -145357068 + 5S rRNA rRNA 12 90 -31 5 747 22 70 0 0 chrX 21293599 21293642 -145356654 + AT_rich Low_complexity Low_complexity 1 43 0 5 747 720 152 18 6 chrX 21295270 21295435 -145354861 + GA-rich Low_complexity Low_complexity 3 169 0 6 747 678 174 19 6 chrX 21295404 21295460 -145354836 + polypurine Low_complexity Low_complexity 3 60 0 6 747 1162 105 20 0 chrX 21295460 21295813 -145354483 + (GAAA)n Simple_repeat Simple_repeat 1 360 0 6 747 678 174 19 6 chrX 21295813 21295915 -145354381 + polypurine Low_complexity Low_complexity 61 162 0 6 747 1159 149 45 36 chrX 21296607 21296830 -145353466 + URR1B DNA MER1_type 1 225 0 6 747 667 234 0 0 chrX 21297008 21297149 -145353147 + B1_Mus2 SINE Alu 5 145 -2 6 747 352 271 76 57 chrX 21297214 21297425 -145352871 + L1MA8 LINE L1 6073 6287 -4 6 747 507 312 85 71 chrX 21297526 21297809 -145352487 - B4A SINE B4 -3 289 3 6 747 745 245 41 61 chrX 21297977 21298173 -145352123 - B3A SINE B2 -6 192 1 6 747 560 274 40 61 chrX 21298260 21298458 -145351838 + B3A SINE B2 1 194 -4 6 747 441 0 0 0 chrX 21299454 21299503 -145350793 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 6 747 554 320 0 7 chrX 21300059 21300207 -145350089 + RSINE1 SINE B4 11 157 -8 6 747 708 311 0 19 chrX 21300254 21300467 -145349829 + B3 SINE B2 2 210 -6 6 747 1563 264 8 13 chrX 21300487 21300867 -145349429 + Lx9 LINE L1 7085 7462 -182 6 747 805 209 18 35 chrX 21300906 21301134 -145349162 - L1M2 LINE L1 -508 5792 5569 6 747 212 277 0 21 chrX 21301220 21301268 -145349028 - B3A SINE B2 -104 94 48 6 747 24 0 0 0 chrX 21302700 21302724 -145347572 + AT_rich Low_complexity Low_complexity 1 24 0 6 747 403 360 96 0 chrX 21304094 21304230 -145346066 - RSINE1 SINE B4 -16 149 1 6 747 998 91 32 0 chrX 21304242 21304396 -145345900 + L1Md_F2 LINE L1 6412 6570 -12 6 747 194 365 12 12 chrX 21304482 21304568 -145345728 - L3 LINE CR1 -562 3927 3842 6 747 180 329 71 39 chrX 21305207 21305362 -145344934 - L3 LINE CR1 -1726 2763 2604 6 747 203 250 0 0 chrX 21305726 21305782 -145344514 + (CATATA)n Simple_repeat Simple_repeat 2 57 0 6 747 228 317 12 0 chrX 21306519 21306601 -145343695 + L1M2 LINE L1 4731 4813 -1330 6 747 21 0 0 0 chrX 21306601 21306622 -145343674 + AT_rich Low_complexity Low_complexity 1 21 0 6 747 555 16 0 0 chrX 21307200 21307264 -145343032 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 747 23 33 0 0 chrX 21307718 21307748 -145342548 + AT_rich Low_complexity Low_complexity 1 30 0 6 747 29 60 0 0 chrX 21307905 21307955 -145342341 + AT_rich Low_complexity Low_complexity 1 50 0 6 747 791 196 7 0 chrX 21308080 21308218 -145342078 + B1_Mus1 SINE Alu 1 139 -9 6 747 21 0 0 0 chrX 21308809 21308830 -145341466 + AT_rich Low_complexity Low_complexity 1 21 0 6 747 809 304 5 0 chrX 21308892 21309106 -145341190 + ID_B1 SINE B4 4 218 -6 6 747 21 57 0 0 chrX 21309451 21309486 -145340810 + AT_rich Low_complexity Low_complexity 1 35 0 6 747 529 230 86 29 chrX 21309871 21310010 -145340286 + B1_Mur2 SINE Alu 1 147 -2 6 747 593 261 15 0 chrX 21310157 21310287 -145340009 - ID_B1 SINE B4 -6 218 87 6 747 488 365 92 35 chrX 21310311 21310572 -145339724 + B4A SINE B4 5 280 -12 6 747 402 57 0 0 chrX 21310620 21310673 -145339623 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 747 556 280 112 0 chrX 21310840 21310983 -145339313 - RSINE1 SINE B4 -5 160 2 6 747 35 24 0 0 chrX 21311366 21311408 -145338888 + AT_rich Low_complexity Low_complexity 1 42 0 6 747 242 318 7 20 chrX 21311717 21311868 -145338428 + (TA)n Simple_repeat Simple_repeat 2 150 0 6 747 571 325 65 14 chrX 21311955 21312233 -145338063 + B4A SINE B4 1 292 0 6 747 1164 240 191 28 chrX 21312401 21312868 -145337428 - Lx8 LINE L1 -5 7468 6926 6 747 248 323 0 20 chrX 21313162 21313260 -145337036 + CT-rich Low_complexity Low_complexity 2 97 0 6 747 995 177 108 0 chrX 21314777 21314980 -145335316 - URR1B DNA MER1_type 0 225 1 6 747 321 282 43 43 chrX 21315003 21315118 -145335178 - ID_B1 SINE B4 -5 219 105 6 747 2589 101 50 21 chrX 21315144 21315568 -145334728 - Lx LINE L1 -5 6649 6214 6 747 4396 78 2 0 chrX 21315568 21316144 -145334152 + Lx LINE L1 5625 6201 -453 6 747 29 0 0 0 chrX 21316797 21316826 -145333470 + AT_rich Low_complexity Low_complexity 1 29 0 6 747 1748 189 89 39 chrX 21317515 21317929 -145332367 - Lx5 LINE L1 -49 7001 6567 6 747 198 0 0 0 chrX 21318486 21318508 -145331788 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 6 747 717 244 66 0 chrX 21318703 21318900 -145331396 + B3 SINE B2 2 211 -5 6 747 375 258 27 96 chrX 21319590 21319736 -145330560 + Charlie4z DNA MER1_type 29 164 -3 6 747 32 91 0 0 chrX 21320411 21320499 -145329797 + AT_rich Low_complexity Low_complexity 1 88 0 6 747 25 0 0 0 chrX 21321287 21321312 -145328984 + AT_rich Low_complexity Low_complexity 1 25 0 6 747 645 14 0 0 chrX 21321498 21321572 -145328724 + (GAGAA)n Simple_repeat Simple_repeat 1 74 0 6 747 553 101 0 10 chrX 21321860 21321960 -145328336 - L1_Mus3 LINE L1 -6 6632 6534 6 747 986 217 105 17 chrX 21322613 21322852 -145327444 - Lx6 LINE L1 -1038 6422 6163 6 747 2549 230 12 10 chrX 21322849 21323346 -145326950 + Lx6 LINE L1 6961 7458 -2 6 747 1603 246 53 18 chrX 21324515 21324912 -145325384 - MTD LTR MaLR 0 419 9 6 747 216 0 0 0 chrX 21324914 21324938 -145325358 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 747 1105 332 81 63 chrX 21325094 21326023 -145324273 - Lx8 LINE L1 -801 6672 5728 6 747 34 0 0 0 chrX 21326057 21326091 -145324205 + AT_rich Low_complexity Low_complexity 1 34 0 6 747 216 154 39 0 chrX 21326092 21326144 -145324152 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 747 420 20 0 0 chrX 21326179 21326228 -145324068 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 747 952 85 0 14 chrX 21326480 21326623 -145323673 - L1_Mus2 LINE L1 0 6566 6426 6 747 343 282 89 6 chrX 21326623 21326792 -145323504 - L1MEf LINE L1 -4591 1887 1656 6 747 719 257 0 51 chrX 21326798 21326954 -145323342 - B1_Mur1 SINE Alu 0 149 2 6 747 350 268 49 0 chrX 21327123 21327205 -145323091 + Lx8 LINE L1 7246 7331 -142 6 747 375 260 135 0 chrX 21327310 21327414 -145322882 + B3 SINE B2 88 205 -11 6 747 21 36 0 0 chrX 21327418 21327446 -145322850 + AT_rich Low_complexity Low_complexity 1 28 0 6 747 898 268 105 17 chrX 21327462 21327758 -145322538 + Lx8 LINE L1 6899 7220 -253 6 747 510 269 106 94 chrX 21327911 21328186 -145322110 + Lx8 LINE L1 7186 7463 -10 6 747 713 279 24 10 chrX 21328186 21328392 -145321904 + B3 SINE B2 2 210 -6 6 747 433 211 0 10 chrX 21328490 21328586 -145321710 + L1M3 LINE L1 4487 4581 -1559 6 747 21 89 0 0 chrX 21328672 21328728 -145321568 + AT_rich Low_complexity Low_complexity 1 56 0 6 747 7501 38 13 5 chrX 21329083 21330005 -145320291 + L1Md_F2 LINE L1 5653 6581 -1 6 747 338 303 0 0 chrX 21330362 21330451 -145319845 + PB1D10 SINE Alu 27 115 -2 6 747 183 80 0 0 chrX 21330584 21330609 -145319687 + (TTA)n Simple_repeat Simple_repeat 2 26 0 6 747 1065 79 0 0 chrX 21330609 21330749 -145319547 - B1_Mus1 SINE Alu -3 145 6 6 747 397 185 41 107 chrX 21330641 21330762 -145319534 - MT2B LTR ERVL -337 264 152 6 747 3857 86 30 8 chrX 21330763 21331362 -145318934 - MusHAL1 LINE L1 -1795 917 306 6 747 232 264 55 14 chrX 21331491 21331564 -145318732 - B4 SINE B4 -211 81 6 6 747 866 245 34 39 chrX 21331591 21331799 -145318497 + B3 SINE B2 6 212 -4 6 747 354 269 45 76 chrX 21332291 21332520 -145317776 - RMER5 LTR ERV1 -2 532 271 6 747 519 259 185 0 chrX 21332521 21332683 -145317613 - MTE2a LTR MaLR -1 378 187 6 747 255 346 22 29 chrX 21332834 21332971 -145317325 - RMER5 LTR ERV1 -271 263 128 6 747 37935 30 0 0 chrX 21332982 21339637 -145310659 - L1Md_T LINE L1 0 6585 1 6 747 342 0 0 0 chrX 21339827 21339865 -145310431 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 747 4445 86 21 6 chrX 21339888 21340519 -145309777 + L1_Mus4 LINE L1 5997 6636 0 6 747 7456 67 8 2 chrX 21340605 21342248 -145308048 - L1Md_F2 LINE L1 -10 6572 4918 6 747 330 261 198 43 chrX 21342248 21342364 -145307932 - B3 SINE B2 -81 135 2 6 747 322 298 90 140 chrX 21342709 21343087 -145307209 - RMER5 LTR ERV1 -124 410 52 6 747 304 341 71 24 chrX 21343315 21343441 -145306855 - B1F2 SINE Alu -12 137 6 6 747 632 175 0 8 chrX 21343978 21344105 -145306191 + CT-rich Low_complexity Low_complexity 3 128 0 6 747 344 266 42 28 chrX 21344430 21344573 -145305723 + B3 SINE B2 67 211 -5 6 747 245 341 11 0 chrX 21345020 21345111 -145305185 - L2a LINE L2 -2 3424 3333 6 747 288 111 0 0 chrX 21345506 21345560 -145304736 + (T)n Simple_repeat Simple_repeat 1 54 0 6 747 578 219 35 0 chrX 21345572 21345686 -145304610 + B1_Mur4 SINE Alu 2 119 -31 6 747 647 272 48 10 chrX 21345748 21345956 -145304340 - B3 SINE B2 0 216 1 6 747 366 301 28 3 chrX 21346355 21346573 -145303723 + L1MD LINE L1 4462 4683 -1463 6 747 22 35 0 0 chrX 21346905 21346934 -145303362 + AT_rich Low_complexity Low_complexity 1 29 0 6 747 1023 268 134 12 chrX 21347219 21347576 -145302720 + MTD LTR MaLR 18 399 -20 6 747 1274 272 120 30 chrX 21347638 21348444 -145301852 - L1MA5A LINE L1 -347 5950 5079 6 747 4470 53 5 3 chrX 21348444 21349008 -145301288 - L1Md_F2 LINE L1 0 6582 6018 6 747 820 294 68 59 chrX 21349008 21349232 -145301064 - L1MA5A LINE L1 -1065 5078 4853 6 747 335 229 143 0 chrX 21349274 21349344 -145300952 - 5S rRNA rRNA -29 92 13 6 747 242 250 25 51 chrX 21349368 21349486 -145300810 - L1MA5A LINE L1 -1316 4827 4713 6 747 1778 276 104 46 chrX 21349522 21349662 -145300634 - Lx9 LINE L1 -594 7050 6915 7 747 612 252 21 0 chrX 21349662 21349805 -145300491 + B1_Mus2 SINE Alu 1 146 -1 7 747 1778 276 104 46 chrX 21349805 21350316 -145299980 - Lx9 LINE L1 -730 6914 6361 7 747 477 0 0 0 chrX 21350343 21350396 -145299900 + (TCTA)n Simple_repeat Simple_repeat 3 55 0 7 747 767 236 106 32 chrX 21350515 21350948 -145299348 - L1MA5A LINE L1 -1407 4736 4272 6 747 736 239 125 21 chrX 21350983 21351175 -145299121 - B3 SINE B2 -4 212 1 7 747 677 248 0 7 chrX 21351500 21351646 -145298650 - B1_Mur2 SINE Alu -4 145 1 7 747 3260 234 98 24 chrX 21351646 21352615 -145297681 - Lx7 LINE L1 -22 7674 6634 7 747 574 254 71 0 chrX 21352615 21352741 -145297555 - B1_Mur2 SINE Alu -13 136 2 7 747 477 306 7 33 chrX 21352943 21353095 -145297201 - MTC LTR MaLR -254 167 20 7 747 369 0 0 0 chrX 21353098 21353139 -145297157 + (CAAAA)n Simple_repeat Simple_repeat 3 43 0 7 747 629 252 16 0 chrX 21353358 21353485 -145296811 + MT2A LTR ERVL 1 129 -404 7 747 1554 111 4 0 chrX 21353529 21353763 -145296533 - MurERV4_19-int LTR ERVK -3478 2302 2068 7 747 30 27 0 0 chrX 21353782 21353819 -145296477 + AT_rich Low_complexity Low_complexity 1 37 0 7 747 986 278 123 67 chrX 21354530 21354919 -145295377 - MTD LTR MaLR -8 411 1 7 747 638 256 100 33 chrX 21355354 21355419 -145294877 - MTD LTR MaLR 0 419 344 7 747 207 0 0 0 chrX 21355419 21355442 -145294854 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 7 747 638 256 100 33 chrX 21355442 21355586 -145294710 - MTD LTR MaLR -76 343 196 7 747 26798 129 27 27 chrX 21355620 21358572 -145291724 - L1_Mus3 LINE L1 -322 6316 3489 7 747 183 42 0 0 chrX 21358572 21358596 -145291700 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 7 747 26798 136 20 23 chrX 21358596 21359988 -145290308 - L1_Mus3 LINE L1 -2395 3488 2073 7 747 342 45 0 0 chrX 21359988 21360032 -145290264 + (TTG)n Simple_repeat Simple_repeat 2 45 0 7 747 26798 142 18 23 chrX 21360032 21361390 -145288906 - L1_Mus3 LINE L1 -3811 2072 698 7 747 5087 92 10 7 chrX 21361505 21362214 -145288082 - Lx3_Mus LINE L1 -8 7001 6291 7 747 1383 309 39 52 chrX 21362218 21363056 -145287240 - L1M2 LINE L1 -2910 3672 2846 7 747 677 138 9 0 chrX 21363107 21363216 -145287080 - B1_Mur2 SINE Alu 0 149 40 7 747 551 281 96 67 chrX 21363332 21363740 -145286556 - L1M2 LINE L1 -4246 2603 2223 7 747 259 339 31 26 chrX 21363856 21364050 -145286246 - L1M2 LINE L1 -4447 2102 1908 7 748 505 341 0 0 chrX 21365141 21365273 -145285023 - B1F1 SINE Alu -13 136 5 7 748 255 300 93 43 chrX 21365276 21365796 -145284500 - L1M2c LINE L1 -4761 2088 1524 7 748 216 102 0 58 chrX 21365955 21366007 -145284289 + CT-rich Low_complexity Low_complexity 2 50 0 7 748 538 327 12 36 chrX 21366164 21366332 -145283964 - RSINE1 SINE B4 0 165 2 7 748 660 141 20 0 chrX 21368353 21368502 -145281794 + CT-rich Low_complexity Low_complexity 1 152 0 7 748 285 29 0 0 chrX 21368502 21368536 -145281760 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 748 568 299 132 16 chrX 21368537 21368727 -145281569 - B4 SINE B4 -49 243 32 7 748 3998 78 11 30 chrX 21369174 21369742 -145280554 - L1Md_F2 LINE L1 0 6582 6026 7 748 24 53 0 0 chrX 21369795 21369833 -145280463 + AT_rich Low_complexity Low_complexity 1 38 0 7 748 495 301 0 23 chrX 21369862 21369994 -145280302 - RSINE1 SINE B4 0 165 36 7 748 569 235 73 7 chrX 21370012 21370149 -145280147 - B1_Mur1 SINE Alu -1 148 3 7 748 369 368 64 50 chrX 21370300 21370598 -145279698 - L1MDa LINE L1 -1121 5413 5112 7 748 259 306 45 0 chrX 21370868 21371002 -145279294 - L1MC3 LINE L1 -7 7778 7639 7 748 36 53 0 0 chrX 21371080 21371137 -145279159 + AT_rich Low_complexity Low_complexity 1 57 0 7 748 911 258 124 55 chrX 21371137 21371301 -145278995 - Lx9 LINE L1 -13 7631 7420 7 748 294 87 0 0 chrX 21371301 21371347 -145278949 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 748 911 258 124 55 chrX 21371347 21371691 -145278605 - Lx9 LINE L1 -225 7419 7089 7 748 1087 74 0 0 chrX 21372099 21372234 -145278062 - B1_Mus2 SINE Alu -11 136 2 7 748 654 311 68 5 chrX 21372487 21372881 -145277415 - L1MDa LINE L1 -4318 2315 1897 7 748 203 116 0 44 chrX 21372895 21372940 -145277356 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 7 748 231 300 137 20 chrX 21373449 21373602 -145276694 - L1MDa LINE L1 -4970 1663 1493 7 748 273 188 0 0 chrX 21373614 21373662 -145276634 + L1_Mm LINE L1 2677 2724 -3159 7 748 638 220 79 124 chrX 21373662 21373864 -145276432 - B3A SINE B2 -2 193 1 7 748 648 199 14 0 chrX 21373895 21374036 -145276260 - Lx7 LINE L1 0 7696 7554 7 748 259 224 94 88 chrX 21374180 21374351 -145275945 - L1MEg LINE L1 -4573 1511 1340 7 748 423 311 19 0 chrX 21374411 21374514 -145275782 - RSINE1 SINE B4 0 165 61 7 748 2715 23 2 237 chrX 21374611 21375121 -145275175 + RLTR10 LTR ERVK 1 390 0 7 748 7614 131 36 16 chrX 21375131 21376505 -145273791 + RLTR10-int LTR ERVK 41 1594 -5987 7 748 8872 17 0 0 chrX 21376587 21377584 -145272712 + RLTR10-int LTR ERVK 990 1986 -1 7 748 2715 23 2 237 chrX 21377584 21378094 -145272202 + RLTR10 LTR ERVK 1 390 0 7 748 2132 42 4 0 chrX 21378104 21378364 -145271932 + RLTR10-int LTR ERVK 41 301 -1686 7 748 201 39 0 0 chrX 21379500 21379526 -145270770 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 748 2786 57 47 26 chrX 21380039 21380421 -145269875 - RLTR10 LTR ERVK 0 390 1 7 748 1798 173 26 9 chrX 21380904 21381253 -145269043 - Lx9 LINE L1 -131 7513 7159 7 748 986 0 31 0 chrX 21381263 21381390 -145268906 - L1Md_A LINE L1 0 6582 6452 7 748 233 185 93 0 chrX 21381404 21381458 -145268838 - Lx9 LINE L1 -636 7008 6950 7 748 3835 275 65 84 chrX 21381454 21383704 -145266592 - Lx7 LINE L1 -1510 6186 3975 7 748 730 289 5 21 chrX 21383805 21383981 -145266315 + B3 SINE B2 14 188 -28 7 748 414 57 0 0 chrX 21383981 21384034 -145266262 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 748 730 289 5 21 chrX 21384034 21384048 -145266248 + B3 SINE B2 189 201 -15 7 748 1007 232 217 15 chrX 21384511 21384852 -145265444 + MTD LTR MaLR 10 419 0 7 748 639 278 108 20 chrX 21384869 21385166 -145265130 + L1M3 LINE L1 5341 5663 -505 7 748 299 253 152 11 chrX 21385174 21385266 -145265030 - PB1D7 SINE Alu -3 117 13 7 748 384 259 130 0 chrX 21385278 21385409 -145264887 + L1M3 LINE L1 5675 5822 -367 7 748 287 363 20 20 chrX 21385752 21385901 -145264395 + MER5A1 DNA MER1_type 2 150 -16 7 748 494 236 0 0 chrX 21386415 21386504 -145263792 - Lx7 LINE L1 -1386 6310 6222 7 748 2661 196 23 36 chrX 21386510 21386829 -145263467 - Lx7 LINE L1 -213 5667 5353 7 748 5358 40 0 3 chrX 21386829 21387474 -145262822 - L1Md_T LINE L1 0 6582 5940 7 748 2661 196 23 36 chrX 21387474 21387598 -145262698 - Lx7 LINE L1 -528 5352 5230 7 748 234 0 0 0 chrX 21387598 21387624 -145262672 + (TA)n Simple_repeat Simple_repeat 2 27 0 7 748 2661 196 23 36 chrX 21387624 21387736 -145262560 - Lx7 LINE L1 -651 5229 5118 7 748 3651 73 0 6 chrX 21387746 21388228 -145262068 - L1_Mus1 LINE L1 0 6567 6089 7 748 3583 59 0 13 chrX 21388228 21388692 -145261604 + L1_Mus1 LINE L1 5625 6082 -485 7 748 803 204 325 16 chrX 21388677 21388752 -145261544 - Lx7 LINE L1 -741 5139 5022 7 748 1438 53 11 0 chrX 21388752 21388940 -145261356 - L1Md_F3 LINE L1 -14 6570 6381 7 748 803 204 325 16 chrX 21388940 21389178 -145261118 - Lx7 LINE L1 -859 5021 4729 7 748 2485 176 40 2 chrX 21389228 21389683 -145260613 - Lx3C LINE L1 -2 6974 6503 7 748 4921 148 49 7 chrX 21389683 21390588 -145259708 + Lx3C LINE L1 5621 6563 -413 7 748 685 168 112 0 chrX 21390587 21390653 -145259643 - Lx7 LINE L1 -1140 4740 4669 7 748 285 29 0 0 chrX 21390653 21390687 -145259609 + (CAT)n Simple_repeat Simple_repeat 3 36 0 7 748 685 168 112 0 chrX 21390687 21390817 -145259479 - Lx7 LINE L1 -1212 4668 4524 7 748 4537 221 49 35 chrX 21390813 21391903 -145258393 + Lx7 LINE L1 6320 7424 -272 7 748 7568 46 9 2 chrX 21392377 21393363 -145256933 - L1Md_F3 LINE L1 -5 6579 5587 7 748 1356 24 0 0 chrX 21393362 21393530 -145256766 + L1_Mm LINE L1 4368 4535 -1348 7 748 1740 162 45 19 chrX 21393583 21393960 -145256336 - Lx7 LINE L1 -3420 2457 2071 7 748 198 91 0 0 chrX 21393962 21393995 -145256301 + (TAG)n Simple_repeat Simple_repeat 3 35 0 7 748 864 229 32 57 chrX 21393999 21394449 -145255847 - Lx7 LINE L1 -4560 1317 886 7 748 1054 313 130 7 chrX 21395732 21396302 -145253994 + Lx9 LINE L1 6186 6825 -819 7 748 3335 38 5 0 chrX 21396304 21396698 -145253598 - MTA_Mm LTR MaLR 0 396 1 7 748 7400 76 38 4 chrX 21396698 21397760 -145252536 - MTA_Mm-int LTR MaLR 0 1098 1 7 748 3202 46 8 2 chrX 21397761 21398155 -145252141 - MTA_Mm LTR MaLR 0 396 1 7 748 1304 284 51 33 chrX 21398202 21398774 -145251522 + Lx9 LINE L1 6902 7483 -161 7 748 28 29 0 0 chrX 21398779 21398814 -145251482 + AT_rich Low_complexity Low_complexity 1 35 0 7 748 617 38 0 12 chrX 21398951 21399032 -145251264 + (GAAA)n Simple_repeat Simple_repeat 2 81 0 7 748 6787 83 9 1 chrX 21400018 21401096 -145249200 + L1_Mus1 LINE L1 5480 6566 -1 7 748 603 84 0 0 chrX 21401294 21401389 -145248907 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 7 748 1637 276 45 22 chrX 21401389 21402012 -145248284 - Lx9 LINE L1 -188 7456 6820 7 748 8084 34 5 5 chrX 21402131 21403518 -145246778 - L1Md_F3 LINE L1 -1 6583 5204 7 748 1208 71 65 0 chrX 21403731 21403901 -145246395 - B2_Mm2 SINE B2 -14 181 1 7 748 341 292 56 0 chrX 21404801 21404890 -145245406 - B3 SINE B2 -46 170 77 7 748 23 0 0 0 chrX 21405057 21405080 -145245216 + AT_rich Low_complexity Low_complexity 1 23 0 7 748 246 333 0 0 chrX 21405102 21405168 -145245128 - tRNA-Ala-GCA tRNA tRNA -9 66 1 7 748 328 303 107 24 chrX 21405172 21405341 -145244955 - MIRb SINE MIR -59 209 27 7 748 239 250 45 30 chrX 21407007 21407139 -145243157 + (TATATG)n Simple_repeat Simple_repeat 4 137 0 7 748 331 199 5 116 chrX 21407115 21407359 -145242937 + (TTATA)n Simple_repeat Simple_repeat 1 217 0 7 748 656 303 86 14 chrX 21407777 21408061 -145242235 - MLT2D LTR ERVL -89 308 4 7 748 23 0 0 0 chrX 21408217 21408240 -145242056 + AT_rich Low_complexity Low_complexity 1 23 0 7 748 4497 61 7 0 chrX 21408305 21408875 -145241421 + L1_Mus1 LINE L1 5994 6567 0 7 748 865 83 0 0 chrX 21408901 21409021 -145241275 - Lx5 LINE L1 -1271 5779 5660 7 748 235 88 0 0 chrX 21409019 21409053 -145241243 - L1_Mur1 LINE L1 -422 5464 5431 7 748 2234 192 7 9 chrX 21409033 21409474 -145240822 + Lx5 LINE L1 6209 6648 -402 7 748 481 158 84 0 chrX 21409496 21409591 -145240705 + Lx5 LINE L1 5788 5890 -1160 7 748 360 301 127 13 chrX 21409595 21409753 -145240543 + MLT2D LTR ERVL 14 189 -225 7 748 729 271 116 10 chrX 21410023 21410325 -145239971 + Lx5 LINE L1 5890 6223 -827 7 748 329 225 62 0 chrX 21410342 21410422 -145239874 - RLTR11A2 LTR ERVK -436 91 7 7 748 926 304 46 19 chrX 21410544 21410913 -145239383 + MTE2b LTR MaLR 1 379 0 7 748 22 35 0 0 chrX 21410939 21410968 -145239328 + AT_rich Low_complexity Low_complexity 1 29 0 7 748 509 253 40 115 chrX 21411104 21411278 -145239018 - RSINE1 SINE B4 0 165 5 7 748 22 56 0 0 chrX 21411320 21411356 -145238940 + AT_rich Low_complexity Low_complexity 1 36 0 7 748 533 329 0 0 chrX 21412066 21412212 -145238084 + RSINE1 SINE B4 3 148 -17 7 748 25 31 0 0 chrX 21412232 21412264 -145238032 + AT_rich Low_complexity Low_complexity 1 32 0 7 748 589 265 91 15 chrX 21412641 21412840 -145237456 - B3 SINE B2 -1 215 2 7 748 538 202 9 9 chrX 21413412 21413517 -145236779 + ORR1C2 LTR MaLR 280 384 0 7 748 1847 259 22 15 chrX 21413520 21413978 -145236318 + ORR1C2-int LTR MaLR 4 464 -906 7 748 1141 315 31 15 chrX 21413988 21414465 -145235831 - Lx8 LINE L1 -361 7112 6628 7 748 1676 141 61 42 chrX 21414466 21414778 -145235518 + RMER4A LTR ERVK 1 318 -148 8 748 719 22 11 0 chrX 21414791 21414880 -145235416 + (TC)n Simple_repeat Simple_repeat 1 90 0 8 748 272 240 27 0 chrX 21414880 21414955 -145235341 + RMER4A LTR ERVK 386 462 -4 8 748 1350 280 23 21 chrX 21414957 21415391 -145234905 - Lx8 LINE L1 -842 6631 6197 7 748 222 128 0 0 chrX 21415393 21415432 -145234864 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 8 748 563 240 8 40 chrX 21415512 21415638 -145234658 - B1_Mur1 SINE Alu -7 142 21 8 748 1427 302 22 6 chrX 21415943 21416479 -145233817 - L1_Mur3 LINE L1 -705 5175 4631 8 748 516 253 64 26 chrX 21416480 21416744 -145233552 - L1_Mur3 LINE L1 -1477 4403 4130 8 748 3928 230 113 12 chrX 21416740 21418182 -145232114 + Lx4B LINE L1 5460 7053 -5 8 748 227 167 37 0 chrX 21418206 21418260 -145232036 + T-rich Low_complexity Low_complexity 2 57 0 8 748 537 189 32 13 chrX 21418271 21418426 -145231870 + Lx7 LINE L1 7373 7530 -166 8 748 29389 78 12 2 chrX 21418410 21423325 -145226971 - L1Md_F2 LINE L1 -1 6581 1618 8 748 6302 18 1 0 chrX 21423325 21424045 -145226251 - L1Md_A LINE L1 0 6582 5862 8 748 38737 14 3 6 chrX 21424045 21430639 -145219657 - L1Md_A LINE L1 -6 6576 1 8 748 4814 106 24 16 chrX 21430640 21431867 -145218429 - L1Md_F2 LINE L1 -4255 1628 392 8 748 743 159 28 45 chrX 21431871 21432049 -145218247 + Lx7 LINE L1 7521 7695 -1 8 748 718 238 51 17 chrX 21432092 21432267 -145218029 + MTD LTR MaLR 196 376 -43 8 748 1417 290 35 2 chrX 21432756 21433154 -145217142 + MTD LTR MaLR 1 411 -8 8 748 30 27 0 0 chrX 21433864 21433901 -145216395 + AT_rich Low_complexity Low_complexity 1 37 0 8 748 1069 227 156 174 chrX 21433922 21434364 -145215932 - MT2A LTR ERVL -74 459 26 8 748 222 146 21 0 chrX 21434532 21434580 -145215716 + (TTG)n Simple_repeat Simple_repeat 3 51 0 8 748 550 158 211 0 chrX 21434594 21434727 -145215569 + MTD LTR MaLR 255 415 -4 8 748 814 296 62 4 chrX 21435647 21435874 -145214422 + MTD LTR MaLR 91 330 -89 8 748 342 265 100 20 chrX 21439302 21439402 -145210894 + ID_B1 SINE B4 2 109 -115 8 748 32 43 0 0 chrX 21439489 21439535 -145210761 + AT_rich Low_complexity Low_complexity 1 46 0 8 748 4943 89 0 0 chrX 21439892 21440619 -145209677 - L1_Mm LINE L1 -1493 4390 3664 8 748 327 82 0 0 chrX 21440625 21440674 -145209622 + L1_Mus2 LINE L1 6518 6566 0 8 748 7190 135 31 47 chrX 21440731 21441570 -145208726 + Lx2 LINE L1 5670 6482 -515 8 748 1000 110 7 0 chrX 21441570 21441715 -145208581 - B1_Mus2 SINE Alu 0 147 2 8 748 7190 135 31 47 chrX 21441715 21442224 -145208072 + Lx2 LINE L1 6483 6996 -1 8 748 34639 39 9 0 chrX 21442234 21447720 -145202576 + L1Md_F2 LINE L1 7 5589 -297 8 748 8984 5 1 0 chrX 21447720 21448715 -145201581 + L1Md_T LINE L1 5587 6582 0 8 748 34639 73 5 3 chrX 21448715 21449635 -145200661 + L1Md_F2 LINE L1 5590 6561 -24 8 748 30 0 0 0 chrX 21449665 21449695 -145200601 + AT_rich Low_complexity Low_complexity 1 30 0 8 748 19847 86 2 1 chrX 21449695 21452574 -145197722 - L1_Mm LINE L1 -482 5401 2521 8 748 948 88 22 0 chrX 21452575 21452711 -145197585 + ORR1A0 LTR MaLR 141 279 -67 8 748 195 42 0 0 chrX 21453697 21453721 -145196575 + (A)n Simple_repeat Simple_repeat 1 24 0 8 748 9893 111 14 11 chrX 21453731 21455976 -145194320 + L1Md_A LINE L1 217 2681 -3202 8 748 8467 89 4 21 chrX 21455978 21456800 -145193496 - L1Md_F LINE L1 -3349 2534 1733 8 748 1668 10 0 0 chrX 21456800 21456992 -145193304 - L1Md_A LINE L1 0 6582 6391 8 748 8467 111 25 22 chrX 21456992 21458290 -145192006 - L1Md_F LINE L1 -4151 1732 423 8 748 1612 195 70 16 chrX 21458322 21458693 -145191603 + Lx5 LINE L1 6660 7050 0 8 748 893 91 48 18 chrX 21458803 21458970 -145191326 - L1_Mus3 LINE L1 -1 6637 6466 8 748 27 29 0 0 chrX 21459116 21459150 -145191146 + AT_rich Low_complexity Low_complexity 1 34 0 8 748 198 0 0 0 chrX 21459186 21459208 -145191088 + (TA)n Simple_repeat Simple_repeat 2 23 0 8 748 360 0 0 0 chrX 21459870 21459910 -145190386 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 748 639 219 89 0 chrX 21459917 21460040 -145190256 + RSINE1 SINE B4 17 150 -15 8 748 585 67 0 11 chrX 21460104 21460194 -145190102 - L1Md_F2 LINE L1 -1 6581 6493 8 748 187 375 11 11 chrX 21460348 21460437 -145189859 + MIRm SINE MIR 188 276 0 8 748 540 0 0 0 chrX 21461327 21461387 -145188909 + (GA)n Simple_repeat Simple_repeat 1 60 0 8 748 2055 123 62 0 chrX 21461977 21462285 -145188011 + ORR1A2 LTR MaLR 1 327 0 8 748 22 35 0 0 chrX 21462755 21462784 -145187512 + AT_rich Low_complexity Low_complexity 1 29 0 8 748 33 0 0 0 chrX 21463608 21463641 -145186655 + AT_rich Low_complexity Low_complexity 1 33 0 8 748 5449 85 104 9 chrX 21463653 21464447 -145185849 - L1_Mus3 LINE L1 -7 6631 5762 8 748 15729 127 22 7 chrX 21464447 21467165 -145183131 + L1_Mm LINE L1 2357 5115 -768 8 748 27716 66 2 2 chrX 21467164 21471695 -145178601 + L1Md_F3 LINE L1 391 4876 -1007 8 748 8235 15 2 0 chrX 21471701 21473327 -145176969 - L1Md_A LINE L1 0 6582 4955 8 748 5383 65 0 1 chrX 21473324 21474054 -145176242 + L1Md_F3 LINE L1 4858 5586 -297 8 748 8061 37 4 3 chrX 21474055 21475038 -145175258 + L1Md_F3 LINE L1 5588 6571 -13 8 748 3079 122 42 15 chrX 21475057 21475581 -145174715 + L1_Mm LINE L1 5220 5757 -126 8 748 416 296 164 31 chrX 21476815 21477070 -145173226 + RMER20B LTR ERVK 90 364 -152 8 748 334 56 19 0 chrX 21477118 21477172 -145173124 - Lx3A LINE L1 -10 6971 6917 8 748 1224 99 0 0 chrX 21477172 21477343 -145172953 - L1_Mur1 LINE L1 -187 5699 5529 8 748 1859 83 4 0 chrX 21477338 21477604 -145172692 + L1_Mur1 LINE L1 5262 5528 -358 8 748 2590 163 41 29 chrX 21477604 21478132 -145172164 + RLTR13D1 LTR ERVK 1 543 -359 8 748 3863 74 21 14 chrX 21478105 21478676 -145171620 + RLTR13D1 LTR ERVK 227 808 0 8 748 22874 94 32 39 chrX 21478677 21478862 -145171434 - L1_Mur1 LINE L1 -615 5271 5084 8 748 869 20 0 0 chrX 21478862 21478964 -145171332 - U6 snRNA snRNA -5 102 1 8 748 22874 94 32 39 chrX 21478964 21482566 -145167730 - L1_Mur1 LINE L1 -615 5083 1408 8 748 20469 105 24 4 chrX 21482572 21486563 -145163733 - L1_Mus1 LINE L1 -2 6565 2489 8 748 2073 85 48 33 chrX 21486563 21486893 -145163403 - L1_Mus2 LINE L1 0 6566 6232 8 748 20469 38 40430 0 chrX 21486893 21486972 -145163324 - L1_Mus1 LINE L1 -3395 2488 2483 8 748 7354 137 28 8 chrX 21486968 21488366 -145161930 - L1_Mur1 LINE L1 -4459 1427 3 8 748 469 325 62 42 chrX 21488545 21488853 -145161443 + L1M5 LINE L1 3815 4128 -2018 8 748 441 0 0 0 chrX 21489308 21489357 -145160939 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 748 1148 214 66 129 chrX 21489429 21489762 -145160534 - MT2A LTR ERVL -221 312 1 8 748 761 195 18 25 chrX 21491134 21491297 -145158999 + ORR1C1 LTR MaLR 1 162 -216 8 748 8388 120 28 13 chrX 21491297 21492664 -145157632 + Lx2 LINE L1 5606 6992 -5 8 748 365 349 95 0 chrX 21494329 21494455 -145155841 + RSINE1 SINE B4 3 140 -25 8 748 234 198 35 11 chrX 21494504 21494591 -145155705 + (CATA)n Simple_repeat Simple_repeat 2 90 0 8 749 3672 66 20 4 chrX 21496404 21496892 -145153404 - LTRIS2 LTR ERV1 0 564 69 8 749 3378 33 5 0 chrX 21497149 21497543 -145152753 - MTA_Mm LTR MaLR 0 396 1 8 749 259 318 5 5 chrX 21497944 21498100 -145152196 + MurSAT1 Satellite Satellite 1 156 -20 8 749 304 299 19 5 chrX 21498189 21498335 -145151961 + MurSAT1 Satellite Satellite 1 148 0 8 749 2295 207 131 77 chrX 21499182 21499997 -145150299 - RLTR13D6 LTR ERVK 0 1033 39 8 749 337 258 54 28 chrX 21500169 21500353 -145149943 + MurSAT1 Satellite Satellite 1 188 0 1 749 261 293 13 13 chrX 21500923 21500999 -145149297 + MurSAT1 Satellite Satellite 24 99 -21 2 749 231 313 30 12 chrX 21501468 21501577 -145148719 + MurSAT1 Satellite Satellite 1 110 -1 3 749 271 316 0 0 chrX 21502021 21502120 -145148176 + MurSAT1 Satellite Satellite 1 99 -1 4 749 4770 64 2 0 chrX 21502308 21502904 -145147392 - L1_Mus1 LINE L1 0 6567 5971 5 749 289 365 0 0 chrX 21503172 21503279 -145147017 + MurSAT1 Satellite Satellite 2 108 -12 6 749 365 306 21 21 chrX 21503292 21503468 -145146828 + MurSAT1 Satellite Satellite 1 176 -1 6 749 285 330 0 5 chrX 21503771 21503905 -145146391 + MurSAT1 Satellite Satellite 1 133 -5 4 749 5642 40 0 9 chrX 21503955 21504615 -145145681 - L1Md_T LINE L1 -139 6443 5785 7 749 956 24 8 0 chrX 21504615 21504742 -145145554 + L1Md_A LINE L1 6454 6581 -1 8 749 5642 40 0 9 chrX 21504742 21504765 -145145531 - L1Md_T LINE L1 -798 5784 5766 7 749 266 330 30 12 chrX 21504837 21505193 -145145103 + MurSAT1 Satellite Satellite 1 362 -4 9 749 261 357 18 0 chrX 21505228 21505340 -145144956 + MurSAT1 Satellite Satellite 1 114 -6 9 749 408 330 0 0 chrX 21505435 21505561 -145144735 + MurSAT1 Satellite Satellite 1 126 -4 1 749 318 312 27 27 chrX 21505772 21505884 -145144412 + MurSAT1 Satellite Satellite 8 119 -1 1 749 430 303 25 15 chrX 21505919 21506269 -145144027 + MurSAT1 Satellite Satellite 1 353 -10 1 749 246 312 0 0 chrX 21506335 21506415 -145143881 + MurSAT1 Satellite Satellite 17 96 -24 1 749 381 302 7 23 chrX 21506445 21506657 -145143639 + MurSAT1 Satellite Satellite 1 208 -9 1 749 255 304 76 34 chrX 21507293 21507412 -145142884 + L2c LINE L2 3029 3152 -235 1 749 508 233 73 39 chrX 21507780 21508012 -145142284 - ORSL-2b DNA Tip100 -115 393 154 1 749 441 0 0 0 chrX 21508126 21508175 -145142121 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 749 6256 56 0 18 chrX 21508363 21509178 -145141118 - L1Md_F2 LINE L1 -3 6579 5780 1 749 378 0 0 0 chrX 21509331 21509373 -145140923 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 749 434 310 165 4 chrX 21509427 21509676 -145140620 - B4A SINE B4 -2 290 2 1 749 438 231 153 37 chrX 21509678 21509894 -145140402 - L1M2 LINE L1 -1738 4405 4165 1 749 302 317 67 24 chrX 21509889 21510054 -145140242 + L1_Mur3 LINE L1 5500 5671 -209 2 749 290 296 14 14 chrX 21510057 21510129 -145140167 + B3 SINE B2 95 166 -50 2 749 1455 235 57 14 chrX 21510377 21510731 -145139565 - ORR1D2 LTR MaLR 0 370 2 2 749 1012 234 5 18 chrX 21510818 21511036 -145139260 + B3 SINE B2 1 215 -1 2 749 6639 72 24 6 chrX 21511213 21512093 -145138203 + L1_Mus1 LINE L1 5672 6567 0 2 749 376 333 39 28 chrX 21512093 21512275 -145138021 - L1M2 LINE L1 -3390 2753 2552 1 749 339 264 55 0 chrX 21512279 21512370 -145137926 + MTE2b LTR MaLR 3 98 -281 2 749 1258 284 9 55 chrX 21512352 21512699 -145137597 + MTE2b LTR MaLR 42 372 -7 2 749 2406 121 77 3 chrX 21512804 21513193 -145137103 - Lx2 LINE L1 -1 6996 6579 2 749 343 316 60 92 chrX 21513216 21513447 -145136849 - L1M2 LINE L1 -3300 2547 2310 1 749 1005 86 7 7 chrX 21513447 21513588 -145136708 + B1_Mus2 SINE Alu 5 145 -2 2 749 343 316 60 92 chrX 21513588 21513868 -145136428 - L1M2 LINE L1 -3525 2322 2052 1 749 244 345 42 45 chrX 21514018 21514355 -145135941 - L1M2 LINE L1 -4304 2545 2210 2 749 1995 106 27 0 chrX 21514428 21514729 -145135567 - L1_Mus3 LINE L1 -13 6625 6317 2 749 7893 54 4 7 chrX 21514729 21514968 -145135328 - L1Md_F2 LINE L1 -4 6578 6346 3 749 1704 121 27 66 chrX 21514968 21515303 -145134993 - RLTRETN_Mm LTR ERVK 0 322 1 3 749 11206 56 6 3 chrX 21515303 21517175 -145133121 - L1Md_F2 LINE L1 -237 6345 4461 3 749 362 238 23 45 chrX 21517856 21517944 -145132352 + MTE2b LTR MaLR 32 117 -262 3 749 656 56 19 0 chrX 21518006 21518113 -145132183 - L1_Mus1 LINE L1 0 6567 6459 3 749 796 242 264 11 chrX 21518547 21518831 -145131465 - ORR1D2 LTR MaLR 0 370 15 3 749 351 0 0 0 chrX 21518831 21518870 -145131426 + (A)n Simple_repeat Simple_repeat 1 39 0 3 749 306 0 0 0 chrX 21520197 21520231 -145130065 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 749 955 306 45 37 chrX 21521013 21521366 -145128930 + MTE2a LTR MaLR 14 369 -10 3 749 3710 97 32 0 chrX 21521644 21522172 -145128124 - L1_Mus3 LINE L1 -5 6633 6089 3 749 335 244 19 0 chrX 21522321 21522405 -145127891 - L1_Mur3 LINE L1 -689 5608 5488 3 749 1029 358 58 30 chrX 21522403 21523091 -145127205 + Lx8 LINE L1 6746 7452 -21 4 749 18254 79 4 3 chrX 21523090 21526228 -145124068 - L1Md_F2 LINE L1 -3 6579 3443 4 749 753 97 90 0 chrX 21526229 21526363 -145123933 + L1_Mm LINE L1 1300 1445 -4438 4 749 814 165 12 6 chrX 21526477 21526642 -145123654 + CT-rich Low_complexity Low_complexity 3 168 0 4 749 279 268 0 0 chrX 21526642 21526698 -145123598 - B1_Mur4 SINE Alu -90 60 5 4 749 1471 217 78 3 chrX 21526699 21527046 -145123250 - ORR1D1 LTR MaLR -1 373 1 4 749 3297 179 7 12 chrX 21527057 21527650 -145122646 + Lx4A LINE L1 6466 7055 -3 4 749 867 90 0 0 chrX 21527658 21527780 -145122516 + (GA)n Simple_repeat Simple_repeat 1 122 0 4 749 1073 96 0 14 chrX 21529263 21529411 -145120885 + B1_Mus2 SINE Alu 1 146 -1 4 749 315 194 0 0 chrX 21529412 21529510 -145120786 + A-rich Low_complexity Low_complexity 1 98 0 4 749 227 341 52 29 chrX 21529736 21529872 -145120424 - MLT1A1 LTR MaLR -2 406 268 5 749 226 342 25 0 chrX 21529971 21530050 -145120246 - MLT1A1 LTR MaLR -378 89 9 5 749 259 317 62 54 chrX 21530167 21530297 -145119999 - MLT1A0 LTR MaLR -234 131 1 5 749 1298 286 144 20 chrX 21530463 21530775 -145119521 + L1M3 LINE L1 2111 2450 -3690 5 749 360 0 0 0 chrX 21530775 21530815 -145119481 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 749 1298 286 144 20 chrX 21530815 21530924 -145119372 + L1M3 LINE L1 2451 2601 -3539 5 749 722 163 75 11 chrX 21530924 21531098 -145119198 + Lx2B LINE L1 6813 6997 -3 5 749 1298 286 144 20 chrX 21531098 21531618 -145118678 + L1M3 LINE L1 2602 3169 -2971 5 749 821 281 185 46 chrX 21531639 21532505 -145117791 - L1MA8 LINE L1 -6 6285 5300 5 749 623 335 56 21 chrX 21532650 21533080 -145117216 - L1MA6 LINE L1 -74 6226 5782 5 749 340 89 0 60 chrX 21533088 21533172 -145117124 + (TA)n Simple_repeat Simple_repeat 1 79 0 5 749 207 0 0 0 chrX 21533211 21533234 -145117062 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5 749 361 264 60 7 chrX 21533234 21533383 -145116913 - L1MA6 LINE L1 -565 5726 5570 5 749 5658 63 6 4 chrX 21533450 21534180 -145116116 + L1_Mus2 LINE L1 5836 6566 0 5 749 223 386 51 19 chrX 21534265 21534421 -145115875 - MIRb SINE MIR 0 268 108 6 749 21247 141 37 6 chrX 21534863 21537220 -145113076 - L1Md_F2 LINE L1 -12 6570 4211 6 749 417 39 0 0 chrX 21537220 21537271 -145113025 + (TA)n Simple_repeat Simple_repeat 1 51 0 6 749 21247 181 62 24 chrX 21537271 21541007 -145109289 - L1Md_F2 LINE L1 -1676 4210 217 6 749 203 290 188 0 chrX 21541767 21541836 -145108460 - MIR3 SINE MIR -35 173 92 6 749 382 211 0 37 chrX 21541900 21542008 -145108288 - L1Md_F3 LINE L1 -3 6581 6478 6 749 294 326 95 22 chrX 21542106 21542285 -145108011 - B2_Mm2 SINE B2 -2 193 2 6 749 22 0 0 0 chrX 21542577 21542599 -145107697 + AT_rich Low_complexity Low_complexity 1 22 0 6 749 267 254 21 35 chrX 21542971 21543114 -145107182 + (TA)n Simple_repeat Simple_repeat 2 142 0 6 749 1970 65 0 22 chrX 21543171 21543440 -145106856 + L1Md_F2 LINE L1 6320 6582 0 6 749 975 270 32 12 chrX 21543518 21543859 -145106437 + L1MA5 LINE L1 5594 5941 -359 6 749 642 269 64 38 chrX 21544195 21544461 -145105835 + L1M4 LINE L1 5302 5574 -610 7 749 464 256 150 37 chrX 21544462 21544649 -145105647 + B3 SINE B2 1 208 -8 7 749 2103 88 9 31 chrX 21544656 21544983 -145105313 - L1_Mus3 LINE L1 -10 6628 6309 7 749 21 36 0 0 chrX 21544993 21545021 -145105275 + AT_rich Low_complexity Low_complexity 1 28 0 7 749 346 239 87 0 chrX 21545203 21545295 -145105001 + Lx8 LINE L1 6839 6938 -535 7 749 1056 285 102 17 chrX 21545327 21545680 -145104616 + Lx8 LINE L1 7042 7424 -49 7 749 1172 53 0 0 chrX 21545729 21545880 -145104416 + L1_Mus2 LINE L1 6415 6565 -1 7 749 180 77 0 0 chrX 21545908 21545934 -145104362 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 7 749 273 179 73 10 chrX 21546008 21546104 -145104192 + L1MB7 LINE L1 6080 6181 -3 7 749 568 276 118 47 chrX 21546704 21547042 -145103254 + Lx9 LINE L1 7270 7631 -13 7 749 464 274 9 0 chrX 21547059 21547165 -145103131 + B1_Mur1 SINE Alu 21 127 -22 7 749 22 0 0 0 chrX 21547221 21547243 -145103053 + AT_rich Low_complexity Low_complexity 1 22 0 8 749 23 0 0 0 chrX 21548531 21548554 -145101742 + AT_rich Low_complexity Low_complexity 1 23 0 8 749 34310 73 3 1 chrX 21548554 21554950 -145095346 - L1Md_F2 LINE L1 -3 6579 171 8 749 619 323 18 12 chrX 21555466 21555629 -145094667 - RSINE1 SINE B4 0 165 2 8 749 430 325 12 23 chrX 21556058 21556193 -145094103 + RMER17C LTR ERVK 1 137 -273 8 749 804 21 0 0 chrX 21556193 21556287 -145094009 + (TTCTC)n Simple_repeat Simple_repeat 3 96 0 8 749 430 280 28 111 chrX 21556287 21556485 -145093811 + RMER17C LTR ERVK 138 404 -6 8 749 1721 218 176 38 chrX 21556812 21557544 -145092752 - RMER6C LTR ERVK 0 756 10 8 749 23 33 0 0 chrX 21558324 21558354 -145091942 + AT_rich Low_complexity Low_complexity 1 30 0 8 749 7028 92 1 4 chrX 21558865 21560451 -145089845 - L1_Mus1 LINE L1 0 6567 4985 8 749 6462 133 39 1 chrX 21560445 21561578 -145088718 - L1_Mm LINE L1 -3002 2881 1706 8 749 3035 62 3 0 chrX 21561578 21561962 -145088334 - L1Md_F2 LINE L1 -12 6570 6186 9 749 12309 56 1 0 chrX 21561963 21563619 -145086677 - L1_Mus1 LINE L1 -1174 4709 3052 8 749 35124 48 2 13 chrX 21563630 21565599 -145084697 - L1Md_F2 LINE L1 0 6582 4679 9 749 2613 3 0 0 chrX 21565599 21565890 -145084406 - L1Md_T LINE L1 -3 6579 6289 9 749 35124 59 8 13 chrX 21565890 21570000 -145080296 - L1Md_F2 LINE L1 -1205 4678 546 9 749 23 54 0 0 chrX 21570131 21570168 -145080128 + AT_rich Low_complexity Low_complexity 1 37 0 9 749 1296 302 17 19 chrX 21570243 21570662 -145079634 - Lx7 LINE L1 -1065 6631 6214 9 749 1320 305 125 28 chrX 21570675 21571356 -145078940 + Lx7 LINE L1 6666 7412 -284 9 749 243 286 32 48 chrX 21571343 21571468 -145078828 + Lx7 LINE L1 7561 7683 -13 9 749 840 343 3 7 chrX 21571533 21571815 -145078481 - B4 SINE B4 -8 284 4 9 749 330 327 0 83 chrX 21572565 21572685 -145077611 + RSINE1 SINE B4 48 157 -8 9 749 1318 244 138 56 chrX 21573033 21573549 -145076747 - RMER4B LTR ERVK -11 574 17 9 749 528 319 99 16 chrX 21574075 21574266 -145076030 + MER58A DNA MER1_type 12 218 -6 9 749 389 308 100 0 chrX 21574708 21574838 -145075458 - B1F1 SINE Alu -6 143 1 9 749 2349 66 119 11 chrX 21575042 21575394 -145074902 + RLTR10 LTR ERVK 1 390 0 1 749 881 307 76 16 chrX 21575733 21576434 -145073862 + L1MB5 LINE L1 4757 5482 -702 1 749 2968 35 6 0 chrX 21576434 21576778 -145073518 + ORR1A0 LTR MaLR 1 346 0 1 749 13961 55 7 1 chrX 21576778 21578560 -145071736 + ORR1A0-int LTR MaLR 1 1792 0 1 749 2939 38 6 0 chrX 21578560 21578904 -145071392 + ORR1A0 LTR MaLR 1 346 0 1 749 291 337 22 83 chrX 21578904 21579014 -145071282 + L1MB5 LINE L1 5483 5591 -593 1 749 259 327 48 38 chrX 21579030 21579051 -145071245 - B4 SINE B4 -2 290 272 1 749 288 77 0 0 chrX 21579051 21579090 -145071206 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 749 397 300 225 35 chrX 21579090 21579315 -145070981 - B4 SINE B4 -21 271 1 1 749 854 271 65 31 chrX 21579315 21579761 -145070535 + L1MB5 LINE L1 5591 6051 -123 1 749 277 284 31 10 chrX 21581034 21581130 -145069166 + GA-rich Low_complexity Low_complexity 3 100 0 1 749 780 338 100 31 chrX 21581608 21582130 -145068166 - Lx8 LINE L1 0 7473 6916 1 749 33 66 0 0 chrX 21582641 21582702 -145067594 + AT_rich Low_complexity Low_complexity 1 61 0 1 749 492 235 29 35 chrX 21583215 21583387 -145066909 - RodERV21-int LTR ERV1 -203 4788 4618 1 749 22 0 0 0 chrX 21583619 21583641 -145066655 + AT_rich Low_complexity Low_complexity 1 22 0 1 749 189 225 0 0 chrX 21583709 21583749 -145066547 + L2a LINE L2 3382 3421 -5 1 749 304 366 0 0 chrX 21583940 21584022 -145066274 - AluG_3 SINE Alu -91 220 139 1 749 421 355 24 37 chrX 21584172 21584336 -145065960 - MLT1F2 LTR MaLR -6 554 393 1 749 611 236 0 0 chrX 21584297 21584407 -145065889 - B1_Mur1 SINE Alu -5 144 35 1 749 2250 50 157 3 chrX 21584407 21584726 -145065570 + LTRIS5 LTR ERV1 1 368 -79 1 749 345 304 0 9 chrX 21584781 21584897 -145065399 - RodERV21-int LTR ERV1 -422 4569 4455 1 749 1624 351 39 39 chrX 21585151 21586399 -145063897 - RodERV21-int LTR ERV1 -860 4131 2885 1 749 324 241 24 44 chrX 21586745 21586950 -145063346 - RodERV21-int LTR ERV1 -1319 5772 5675 1 749 326 302 28 46 chrX 21587382 21587721 -145062575 - RodERV21-int LTR ERV1 -3373 4233 4018 1 749 207 114 0 0 chrX 21588002 21588037 -145062259 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 1 749 3212 123 26 30 chrX 21588299 21588827 -145061469 - RLTR1D LTR ERV1 -16 589 64 1 749 328 298 0 53 chrX 21589259 21589429 -145060867 - RodERV21-int LTR ERV1 -3188 3903 3743 1 749 540 0 0 0 chrX 21589660 21589720 -145060576 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 749 4180 297 41 50 chrX 21589762 21591121 -145059175 - RodERV21-int LTR ERV1 -2273 2718 1355 1 749 629 36 24 0 chrX 21591121 21591204 -145059092 + (TTTTC)n Simple_repeat Simple_repeat 5 89 0 1 749 4180 297 41 50 chrX 21591204 21591226 -145059070 - RodERV21-int LTR ERV1 -3637 1354 1348 1 749 4201 99 13 2 chrX 21591226 21591840 -145058456 - L1_Mus3 LINE L1 -2 6636 6016 1 749 4180 297 41 50 chrX 21591840 21592079 -145058217 - RodERV21-int LTR ERV1 -3644 1347 1112 1 749 791 312 28 51 chrX 21592175 21592530 -145057766 - RodERV21-int LTR ERV1 -3915 1076 730 1 749 240 35 0 0 chrX 21592871 21592900 -145057396 + (A)n Simple_repeat Simple_repeat 1 29 0 1 749 654 13 0 0 chrX 21593460 21593535 -145056761 + (GA)n Simple_repeat Simple_repeat 1 75 0 1 749 321 332 84 63 chrX 21593725 21594011 -145056285 - L1ME3B LINE L1 -352 5888 5597 1 749 657 320 71 78 chrX 21594035 21594343 -145055953 + MTD LTR MaLR 39 344 -75 1 749 243 88 0 0 chrX 21594523 21594557 -145055739 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 1 749 8011 113 39 40 chrX 21594557 21595713 -145054583 - Lx3A LINE L1 -11 6970 5795 1 749 305 24 24 0 chrX 21595713 21595755 -145054541 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 749 8011 85 9 45 chrX 21595755 21596582 -145053714 - Lx3A LINE L1 -89 5797 4995 1 749 9895 173 25 8 chrX 21596583 21598757 -145051539 - L1VL4 LINE L1 -2390 3496 1286 1 749 39000 9 0 0 chrX 21598742 21605298 -145044998 - L1Md_A LINE L1 0 6582 27 1 749 1790 170 48 26 chrX 21605302 21605801 -145044495 - L1VL4 LINE L1 -5332 1325 833 1 749 2406 47 6 0 chrX 21606296 21606616 -145043680 - L1Md_A LINE L1 -3213 2670 2349 1 749 8255 69 14 36 chrX 21606597 21607859 -145042437 - L1Md_A LINE L1 -5470 1254 21 1 749 7232 43 14 5 chrX 21608200 21609085 -145041211 - RLTR13B1 LTR ERVK 0 893 1 1 749 520 320 0 16 chrX 21609267 21609391 -145040905 + RSINE1 SINE B4 3 124 -41 1 749 21 36 0 0 chrX 21610316 21610344 -145039952 + AT_rich Low_complexity Low_complexity 1 28 0 1 749 453 276 40 40 chrX 21610744 21610921 -145039375 - Lx6 LINE L1 -55 7405 7229 1 749 1295 208 135 40 chrX 21610921 21611322 -145038974 + RMER17B LTR ERVK 1 439 -519 1 749 1417 203 7 36 chrX 21611339 21611646 -145038650 + RMER13B LTR ERVK 270 567 -341 1 749 975 288 47 74 chrX 21611644 21612161 -145038135 + RMER13B LTR ERVK 384 853 -7 1 749 323 234 53 11 chrX 21612196 21612291 -145038005 - Lx6 LINE L1 -261 7199 7101 1 749 1784 170 48 28 chrX 21613262 21613762 -145036534 + L1VL4 LINE L1 831 1323 -5332 1 749 36109 13 0 1 chrX 21613766 21619537 -145030759 + L1Md_T LINE L1 1 5586 -297 1 749 8290 41 0 0 chrX 21619537 21620532 -145029764 + L1Md_T LINE L1 5587 6581 -1 1 749 852 141 15 0 chrX 21620569 21620704 -145029592 + B2_Mm1a SINE B2 1 137 -56 1 749 184 30 0 57 chrX 21620710 21620745 -145029551 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 1 749 552 308 69 6 chrX 21620808 21620968 -145029328 + B3A SINE B2 13 182 -16 1 749 225 65 0 0 chrX 21620975 21621006 -145029290 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 749 239 227 0 0 chrX 21621074 21621118 -145029178 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 749 236 361 0 100 chrX 21621362 21621482 -145028814 - Charlie12 DNA MER1_type -2759 114 7 1 749 264 326 0 104 chrX 21621378 21621484 -145028812 + RMER30 DNA MER1_type 103 197 -5 1 749 4023 62 0 0 chrX 21621508 21622009 -145028287 - L1Md_T LINE L1 0 6582 6082 1 749 21837 70 22 21 chrX 21622009 21626034 -145024262 - L1Md_F LINE L1 -1794 4089 104 1 93 27602 144 16 25 chrX 21626035 21632373 -145017923 - L1_Mus2 LINE L1 -127 6439 245 1 750 2169 117 12 3 chrX 21632440 21632765 -145017531 - Lx3_Mus LINE L1 0 7009 6682 1 750 3288 79 0 0 chrX 21632765 21633210 -145017086 + L1_Mur1 LINE L1 5379 5823 -63 1 750 5452 150 22 26 chrX 21633206 21634051 -145016245 - MusHAL1 LINE L1 -507 2205 1352 1 750 251 71 24 0 chrX 21634051 21634093 -145016203 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 750 1127 81 0 7 chrX 21634096 21634245 -145016051 - B1_Mus1 SINE Alu 0 148 1 1 750 5452 150 22 26 chrX 21634245 21634507 -145015789 - MusHAL1 LINE L1 -1361 1351 1098 1 750 829 224 27 5 chrX 21634504 21634724 -145015572 + Lx4B LINE L1 6830 7054 -4 1 750 531 333 61 0 chrX 21634793 21635021 -145015275 - Lx8 LINE L1 -965 6508 6267 1 750 314 360 61 18 chrX 21635791 21635955 -145014341 - L2 LINE L2 -602 2817 2647 1 750 312 324 53 18 chrX 21636027 21636140 -145014156 + PB1D10 SINE Alu 1 117 0 1 750 2076 139 6 6 chrX 21636384 21636703 -145013593 + ORR1A2 LTR MaLR 1 319 -8 1 750 241 313 40 10 chrX 21637303 21637403 -145012893 - Lx8 LINE L1 -496 6977 6875 1 750 472 358 53 46 chrX 21637403 21637684 -145012612 + B4A SINE B4 10 292 0 1 750 333 350 81 53 chrX 21637863 21637989 -145012307 - L1MD LINE L1 -1816 4330 4198 1 750 874 330 24 21 chrX 21637989 21638367 -145011929 - MTEa LTR MaLR 0 379 1 1 750 390 321 129 26 chrX 21638367 21638849 -145011447 - L1MD LINE L1 -1949 4197 3669 1 750 204 222 0 0 chrX 21638853 21638898 -145011398 + CT-rich Low_complexity Low_complexity 2 46 0 1 750 286 80 0 0 chrX 21638946 21638996 -145011300 + Lx LINE L1 6600 6649 -5 1 750 347 299 175 37 chrX 21639022 21639404 -145010892 - L1MD LINE L1 -2507 3639 3205 1 750 1596 47 111 9 chrX 21639413 21639630 -145010666 + L1_Mus1 LINE L1 6327 6565 -2 1 750 25 65 0 0 chrX 21639651 21639697 -145010599 + AT_rich Low_complexity Low_complexity 1 46 0 1 750 726 153 0 51 chrX 21639783 21639941 -145010355 - L1Md_F3 LINE L1 -2 6582 6433 1 750 230 261 185 0 chrX 21639991 21640083 -145010213 - Lx8 LINE L1 -357 7116 7008 1 750 253 226 66 9 chrX 21640123 21640243 -145010053 - L1MD LINE L1 -3013 3133 3008 1 750 1617 172 153 6 chrX 21640291 21640618 -145009678 + ORR1C2 LTR MaLR 1 375 -9 1 750 247 321 43 7 chrX 21640712 21640850 -145009446 - L1M5 LINE L1 -3316 2830 2688 1 750 955 269 85 62 chrX 21641004 21641077 -145009219 - ORR1E LTR MaLR -6 353 286 1 750 1053 266 63 119 chrX 21641077 21641521 -145008775 - MTD LTR MaLR 0 419 1 1 750 955 269 85 62 chrX 21641521 21641736 -145008560 - ORR1E LTR MaLR -74 285 50 1 750 854 142 54 0 chrX 21641736 21641884 -145008412 + Lx3B LINE L1 6814 6969 -4 1 750 410 0 0 20 chrX 21641890 21641941 -145008355 + (TAA)n Simple_repeat Simple_repeat 3 52 0 1 750 955 269 85 62 chrX 21641941 21641985 -145008311 - ORR1E LTR MaLR -313 46 5 1 750 1489 225 64 22 chrX 21642457 21642816 -145007480 + ORR1D1 LTR MaLR 1 374 0 1 750 4158 25 19 0 chrX 21644029 21644513 -145005783 + MT2_Mm LTR ERVL 1 493 0 1 750 19636 22 20 5 chrX 21644513 21646916 -145003380 + MERVL-int LTR ERVL 1 2438 -3047 1 750 23437 26 0 0 chrX 21646911 21649711 -145000585 + MERVL-int LTR ERVL 2572 5372 -113 1 750 331 153 26 53 chrX 21649711 21649787 -145000509 + ORR1D1-int LTR MaLR 567 640 -1323 1 750 302 0 0 0 chrX 21649787 21649825 -145000471 + MERVL-int LTR ERVL 5448 5485 0 1 750 4352 24 0 0 chrX 21649825 21650318 -144999978 + MT2_Mm LTR ERVL 1 493 0 1 750 285 306 26 21 chrX 21650419 21650609 -144999687 + L1M3 LINE L1 4113 4303 -1837 1 750 1733 151 138 19 chrX 21651614 21651658 -144998638 - L1_Mur1 LINE L1 -466 5420 5383 1 750 2816 29 65 28 chrX 21651658 21652010 -144998286 - RLTR10B2 LTR ERVK 0 365 1 1 750 1733 151 138 19 chrX 21652010 21652336 -144997960 - Lx3C LINE L1 -504 5382 5006 1 750 3855 153 40 13 chrX 21652331 21652940 -144997356 + Lx3C LINE L1 5414 6029 -947 1 750 207 0 0 0 chrX 21652940 21652963 -144997333 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 1 750 3855 164 49 8 chrX 21652963 21653330 -144996966 + Lx3C LINE L1 6030 6415 -561 1 750 1111 93 0 0 chrX 21653474 21653624 -144996672 + B2_Mm2 SINE B2 11 160 -35 1 750 2036 66 0 0 chrX 21654182 21654440 -144995856 - L1_Mus1 LINE L1 -1 6566 6309 1 750 588 167 385 0 chrX 21654917 21655073 -144995223 + B3 SINE B2 1 216 0 1 750 28 0 0 0 chrX 21655073 21655101 -144995195 + AT_rich Low_complexity Low_complexity 1 28 0 1 750 227 277 85 0 chrX 21655732 21655862 -144994434 + L1M2 LINE L1 5052 5222 -921 1 750 3440 32 0 7 chrX 21657223 21657636 -144992660 + L1Md_F2 LINE L1 6158 6567 -15 1 750 1715 247 56 33 chrX 21658087 21658749 -144991547 - L1_Rod LINE L1 -357 5490 4814 1 750 258 228 0 0 chrX 21658762 21658819 -144991477 + L1_Rod LINE L1 5670 5726 -121 1 750 41 66 0 0 chrX 21659132 21659208 -144991088 + AT_rich Low_complexity Low_complexity 1 76 0 1 750 201 294 0 0 chrX 21659380 21659431 -144990865 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 750 330 87 0 0 chrX 21659431 21659477 -144990819 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 750 1244 223 141 18 chrX 21659481 21659864 -144990432 - Lx9 LINE L1 -156 7488 7059 1 750 1157 124 18 45 chrX 21659879 21660099 -144990197 + L1_Mus3 LINE L1 6424 6637 -1 1 750 30 69 0 0 chrX 21660483 21660541 -144989755 + AT_rich Low_complexity Low_complexity 1 58 0 1 750 366 159 0 0 chrX 21660672 21660741 -144989555 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 750 1289 266 80 27 chrX 21661394 21661870 -144988426 - RMER5 LTR ERV1 0 534 34 1 750 341 338 57 19 chrX 21662207 21662364 -144987932 + B4A SINE B4 2 164 -128 1 750 456 324 5 47 chrX 21662981 21663172 -144987124 - Lx9 LINE L1 -822 6822 6640 2 750 405 0 0 0 chrX 21664133 21664178 -144986118 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 750 334 248 120 28 chrX 21664215 21664323 -144985973 - L1M4 LINE L1 -703 5471 5354 2 750 44 46 0 0 chrX 21664615 21664680 -144985616 + AT_rich Low_complexity Low_complexity 1 65 0 2 750 392 359 36 20 chrX 21664680 21664930 -144985366 - L1M4 LINE L1 -1815 4331 4078 2 750 248 296 0 0 chrX 21665007 21665061 -144985235 - B3A SINE B2 -118 80 27 2 750 1147 70 0 0 chrX 21665070 21665213 -144985083 - B1_Mus2 SINE Alu 0 147 5 2 750 343 115 148 0 chrX 21665411 21665472 -144984824 - B1_Mus2 SINE Alu -1 146 77 2 750 1901 171 15 30 chrX 21665472 21665865 -144984431 + RMER17C LTR ERVK 1 387 -23 2 750 385 233 0 0 chrX 21665863 21665936 -144984360 - B1_Mus1 SINE Alu -74 74 2 2 750 227 282 10 124 chrX 21665936 21665958 -144984338 - MT2B2 LTR ERVL -352 230 147 2 750 255 342 50 12 chrX 21665958 21666198 -144984098 - L1M4 LINE L1 -2256 3884 3636 2 750 333 0 0 0 chrX 21666210 21666247 -144984049 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 750 2970 176 76 55 chrX 21666247 21667141 -144983155 + RLTR13D1 LTR ERVK 12 855 0 2 750 207 0 0 0 chrX 21667631 21667654 -144982642 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 750 198 0 0 0 chrX 21667654 21667675 -144982621 + (TA)n Simple_repeat Simple_repeat 1 22 0 2 750 451 282 10 0 chrX 21668369 21668472 -144981824 - RMER15-int LTR ERVL -741 4258 4155 2 750 23 0 0 0 chrX 21668982 21669005 -144981291 + AT_rich Low_complexity Low_complexity 1 23 0 2 750 188 35 35 0 chrX 21669337 21669366 -144980930 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 2 750 1136 68 0 0 chrX 21669369 21669515 -144980781 - B1_Mus2 SINE Alu 0 147 2 2 750 341 227 0 0 chrX 21669690 21669756 -144980540 - B4 SINE B4 -225 67 2 2 750 297 0 0 0 chrX 21670050 21670083 -144980213 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 750 500 388 0 0 chrX 21670084 21670231 -144980065 - RSINE1 SINE B4 -16 149 3 2 750 1608 188 3 19 chrX 21670371 21670691 -144979605 - RMER6C LTR ERVK 0 690 376 2 750 514 182 131 0 chrX 21670724 21670823 -144979473 - RMER6C LTR ERVK -608 112 1 2 750 406 322 68 8 chrX 21671815 21672050 -144978246 + L1_Mur3 LINE L1 4836 5084 -796 2 750 234 250 0 0 chrX 21672950 21673002 -144977294 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 750 2416 196 20 65 chrX 21673034 21673584 -144976712 - RMER5 LTR ERV1 -9 525 1 2 750 23 0 0 0 chrX 21675169 21675192 -144975104 + AT_rich Low_complexity Low_complexity 1 23 0 2 750 4378 123 24 4 chrX 21675465 21676272 -144974024 - Lx2 LINE L1 -1056 5941 5109 2 750 750 137 8 0 chrX 21676272 21676403 -144973893 + Lx LINE L1 6523 6654 0 2 750 189 0 0 0 chrX 21676427 21676448 -144973848 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2 750 272 338 0 0 chrX 21677088 21677165 -144973131 + PB1D9 SINE Alu 21 97 -23 2 750 576 302 12 0 chrX 21677173 21677335 -144972961 + ERVL-B4-int LTR ERVL 1010 1173 -4541 2 750 432 281 34 7 chrX 21677688 21677835 -144972461 + ERVL-B4-int LTR ERVL 2781 2931 -2826 2 750 419 325 46 11 chrX 21677835 21678009 -144972287 + ERVL-B4-int LTR ERVL 2864 3043 -2624 2 750 195 42 0 0 chrX 21678266 21678290 -144972006 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 750 245 0 43 43 chrX 21678864 21678911 -144971385 + (TTA)n Simple_repeat Simple_repeat 2 48 0 2 750 890 229 44 0 chrX 21678914 21679097 -144971199 - B3 SINE B2 -25 191 1 2 750 271 359 41 46 chrX 21679566 21679983 -144970313 - L1MEe LINE L1 -3386 2760 2346 2 750 305 353 60 6 chrX 21680035 21680203 -144970093 - L1MEe LINE L1 -3874 2292 2116 2 750 308 200 28 120 chrX 21680470 21680612 -144969684 - Lx9 LINE L1 0 7644 7516 2 750 288 0 0 0 chrX 21680683 21680715 -144969581 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 750 317 271 6 62 chrX 21680819 21680996 -144969300 + L1M4c LINE L1 752 918 -5466 2 750 5118 208 39 6 chrX 21681017 21682087 -144968209 - Lx9 LINE L1 -7 7637 6532 2 750 663 231 59 23 chrX 21682446 21682630 -144967666 + B3 SINE B2 5 190 -5 2 750 192 302 31 16 chrX 21682987 21683051 -144967245 - MIR3 SINE MIR -11 197 133 2 750 949 289 85 16 chrX 21683613 21683930 -144966366 + Lx8 LINE L1 7134 7472 -1 2 750 1536 149 31 38 chrX 21684266 21684553 -144965743 - Lx4A LINE L1 -490 6568 6284 2 750 932 183 27 63 chrX 21684507 21684729 -144965567 + Lx4A LINE L1 6845 7058 0 2 750 253 240 69 64 chrX 21684763 21684981 -144965315 + L1MA9 LINE L1 6093 6311 -1 2 750 323 319 58 15 chrX 21685046 21685184 -144965112 + B1F SINE Alu 1 147 -1 2 750 275 340 14 7 chrX 21685217 21685365 -144964931 - L1MCa LINE L1 -1293 5028 4880 2 750 1059 109 0 0 chrX 21685630 21685777 -144964519 - B1_Mus1 SINE Alu 0 148 2 2 750 7211 125 11 1 chrX 21686061 21687889 -144962407 - Lx LINE L1 -7 6647 4801 2 750 460 301 50 24 chrX 21688076 21688327 -144961969 - L1MCa LINE L1 -2591 3730 3473 2 750 746 311 66 19 chrX 21688436 21689026 -144961270 - L1MCa LINE L1 -2872 3449 2832 2 750 191 36 36 0 chrX 21689085 21689113 -144961183 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 750 518 110 11 0 chrX 21689254 21689345 -144960951 - Lx LINE L1 -2 6652 6561 2 750 231 182 390 0 chrX 21689383 21689542 -144960754 - Lx9 LINE L1 -127 7517 7297 2 750 1122 279 42 11 chrX 21689581 21690029 -144960267 - Lx8 LINE L1 -120 7353 6851 2 750 303 274 166 5 chrX 21690109 21690326 -144959970 - L1MCa LINE L1 -3553 2768 2517 2 750 306 217 0 0 chrX 21690427 21690496 -144959800 + (TA)n Simple_repeat Simple_repeat 1 69 0 2 750 404 158 12 35 chrX 21690680 21690765 -144959531 - B1_Mur4 SINE Alu 0 150 68 2 750 234 0 0 0 chrX 21690778 21690804 -144959492 + (T)n Simple_repeat Simple_repeat 1 26 0 2 750 344 336 17 42 chrX 21690923 21691041 -144959255 - PB1D10 SINE Alu 0 117 3 2 750 233 376 25 102 chrX 21691041 21691107 -144959189 - ID SINE ID -139 85 32 2 750 217 324 39 51 chrX 21691181 21691259 -144959037 + PB1 SINE Alu 26 102 -25 2 750 397 269 75 15 chrX 21691360 21691560 -144958736 - L1MCa LINE L1 -4675 1833 1622 2 750 261 273 224 4 chrX 21691634 21691902 -144958394 - L1MCa LINE L1 -5039 1469 1143 2 750 204 158 0 0 chrX 21692128 21692166 -144958130 + (CTTG)n Simple_repeat Simple_repeat 2 39 0 2 750 2885 26 0 0 chrX 21692446 21692792 -144957504 - MTA_Mm LTR MaLR -50 346 1 2 750 8742 47 12 0 chrX 21692792 21693877 -144956419 - MTA_Mm-int LTR MaLR 0 1098 1 2 750 3230 36 10 0 chrX 21693877 21694269 -144956027 - MTA_Mm LTR MaLR 0 396 1 2 750 270 184 264 0 chrX 21694322 21694409 -144955887 + L1MC LINE L1 3823 3932 -2214 2 750 771 304 83 40 chrX 21694417 21694863 -144955433 + L1MB5 LINE L1 5587 6051 -123 2 750 666 340 34 0 chrX 21695308 21695511 -144954785 + MER44B DNA MER2_type 28 237 -313 2 750 993 207 209 35 chrX 21695511 21695826 -144954470 - ORR1D1 LTR MaLR -3 371 2 2 750 673 275 58 31 chrX 21695826 21696084 -144954212 + MER44B DNA MER2_type 237 501 -49 2 750 543 301 20 0 chrX 21696213 21696359 -144953937 + B1F1 SINE Alu 1 149 0 2 750 2252 109 16 27 chrX 21696441 21696505 -144953791 + Lx LINE L1 6283 6345 -309 2 750 2770 74 77 3 chrX 21696505 21696897 -144953399 - BGLII LTR ERVK 0 421 1 2 750 2252 109 16 27 chrX 21696897 21697208 -144953088 + Lx LINE L1 6346 6654 0 2 750 214 226 19 0 chrX 21697248 21697301 -144952995 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 750 3046 162 36 25 chrX 21697421 21698010 -144952286 - RLTR17 LTR ERVK 0 692 98 2 750 220 372 0 0 chrX 21699073 21699151 -144951145 + ID4_ SINE ID 6 83 0 2 750 1026 112 25 0 chrX 21700249 21700409 -144949887 - B2_Mm2 SINE B2 -5 190 27 2 750 4710 78 0 8 chrX 21700421 21701065 -144949231 - L1Md_F2 LINE L1 0 6582 5944 2 750 427 279 124 56 chrX 21701773 21702217 -144948079 - L1M3c LINE L1 -4549 1592 1119 2 750 614 219 18 6 chrX 21702315 21702480 -144947816 + L1M3 LINE L1 5100 5266 -874 2 750 23 54 0 0 chrX 21702480 21702517 -144947779 + AT_rich Low_complexity Low_complexity 1 37 0 2 750 410 290 59 32 chrX 21702537 21702790 -144947506 + L1M3 LINE L1 5293 5552 -616 2 750 189 145 48 0 chrX 21702875 21702937 -144947359 + (CA)n Simple_repeat Simple_repeat 1 65 0 2 750 438 20 0 0 chrX 21702937 21702988 -144947308 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 750 1240 288 57 55 chrX 21703105 21703631 -144946665 - RMER5 LTR ERV1 -7 527 1 2 750 3073 192 47 31 chrX 21703725 21704951 -144945345 - Lx3C LINE L1 -11 6643 5447 2 750 360 253 11 11 chrX 21704973 21705065 -144945231 + MTD LTR MaLR 3 94 -325 2 750 493 282 36 6 chrX 21705066 21705239 -144945057 + MTD LTR MaLR 231 405 -14 2 750 1276 157 43 25 chrX 21705459 21705694 -144944602 + RMER19B LTR ERVK 664 902 0 2 750 246 296 0 0 chrX 21705832 21705886 -144944410 + B3 SINE B2 2 55 -161 2 750 347 39 39 0 chrX 21706042 21706094 -144944202 + (CAGAGA)n Simple_repeat Simple_repeat 1 54 0 2 750 2164 116 19 3 chrX 21706523 21706842 -144943454 - ORR1A3 LTR MaLR -2 324 1 2 750 38102 12 0 7 chrX 21707105 21712921 -144937375 + L1Md_A LINE L1 1 5585 -298 2 750 8792 14 0 1 chrX 21712922 21713919 -144936377 + L1Md_A LINE L1 5587 6582 0 2 750 273 183 0 0 chrX 21714693 21714753 -144935543 + GA-rich Low_complexity Low_complexity 1 60 0 2 750 529 247 213 23 chrX 21714805 21714979 -144935317 + B3 SINE B2 10 216 0 2 750 27 49 0 0 chrX 21716218 21716259 -144934037 + AT_rich Low_complexity Low_complexity 1 41 0 2 750 641 245 85 6 chrX 21716355 21716519 -144933777 - B3 SINE B2 -38 178 2 2 750 579 112 0 0 chrX 21716595 21716684 -144933612 + (TG)n Simple_repeat Simple_repeat 2 90 0 2 750 4099 171 64 9 chrX 21716749 21717549 -144932747 - Lx4B LINE L1 -12 7046 6203 2 750 7804 32 1 0 chrX 21717706 21718625 -144931671 - L1Md_F3 LINE L1 -14 6570 5651 2 750 21 0 0 0 chrX 21719004 21719025 -144931271 + AT_rich Low_complexity Low_complexity 1 21 0 2 750 1102 90 0 0 chrX 21719275 21719419 -144930877 + B1_Mus2 SINE Alu 2 145 -2 2 750 576 0 0 0 chrX 21720107 21720171 -144930125 + (TC)n Simple_repeat Simple_repeat 1 64 0 2 750 367 78 31 0 chrX 21720172 21720236 -144930060 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 750 415 331 14 22 chrX 21720237 21720376 -144929920 - RSINE1 SINE B4 -7 158 21 2 750 2132 147 3 6 chrX 21720494 21720822 -144929474 - ORR1A2 LTR MaLR 0 327 1 2 750 393 336 86 14 chrX 21720912 21721051 -144929245 - B1F SINE Alu 0 149 1 2 750 246 32 0 0 chrX 21721055 21721086 -144929210 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 750 951 186 0 60 chrX 21721278 21721478 -144928818 + Lx3C LINE L1 6787 6974 -2 3 750 4587 97 17 0 chrX 21721952 21722589 -144927707 - L1_Mus1 LINE L1 -1 6566 5919 3 750 6339 74 1 1 chrX 21722589 21723508 -144926788 + L1_Mus1 LINE L1 5008 5926 -641 3 750 22 88 0 0 chrX 21723583 21723640 -144926656 + AT_rich Low_complexity Low_complexity 1 57 0 3 750 309 325 183 21 chrX 21723640 21724111 -144926185 + L1MEc LINE L1 27 573 -5827 3 750 23 0 0 0 chrX 21724547 21724570 -144925726 + AT_rich Low_complexity Low_complexity 1 23 0 3 750 21 36 0 0 chrX 21724631 21724659 -144925637 + AT_rich Low_complexity Low_complexity 1 28 0 3 750 344 245 57 29 chrX 21724748 21724853 -144925443 + Lx7 LINE L1 7585 7692 -4 3 750 286 262 81 27 chrX 21724864 21725013 -144925283 + L1MEc LINE L1 1295 1451 -4949 3 750 260 294 29 14 chrX 21725375 21725513 -144924783 + L1MEc LINE L1 3520 3659 -2660 3 750 316 337 60 48 chrX 21725779 21726047 -144924249 + L1M4 LINE L1 3676 3946 -2200 3 750 318 173 2 0 chrX 21726053 21726112 -144924184 + B1_Mus2 SINE Alu 90 149 0 3 750 262 369 10 0 chrX 21726201 21726304 -144923992 + L1M3a LINE L1 294 397 -5558 3 750 1187 48 0 0 chrX 21726703 21726849 -144923447 - B1_Mm SINE Alu -1 146 1 3 750 232 233 0 16 chrX 21726864 21726925 -144923371 + L1M4 LINE L1 4104 4163 -1983 3 750 27 73 0 0 chrX 21727082 21727137 -144923159 + AT_rich Low_complexity Low_complexity 1 55 0 3 750 519 268 147 23 chrX 21727139 21727445 -144922851 + L1MEc LINE L1 5162 5505 -814 3 750 1773 181 62 125 chrX 21727544 21727798 -144922498 - MTC LTR MaLR 0 421 210 3 750 6026 55 0 57 chrX 21727798 21728669 -144921627 - L1Md_F2 LINE L1 0 6582 5784 3 750 1773 181 62 125 chrX 21728669 21728862 -144921434 - MTC LTR MaLR -212 209 2 3 750 822 313 106 31 chrX 21729102 21729526 -144920770 + L1ME2 LINE L1 5398 5859 -305 3 750 421 102 11 64 chrX 21729526 21729620 -144920676 - L1Md_F2 LINE L1 0 6582 6494 3 750 822 315 98 42 chrX 21729620 21729847 -144920449 + L1ME2 LINE L1 5860 6056 -128 3 750 319 286 0 0 chrX 21729950 21730027 -144920269 + ID4 SINE ID 7 83 0 3 750 232 317 59 15 chrX 21730150 21730352 -144919944 + L1_Rod LINE L1 1625 1835 -4012 3 750 297 257 44 0 chrX 21730388 21730501 -144919795 + (TA)n Simple_repeat Simple_repeat 1 118 0 3 750 588 313 42 6 chrX 21730506 21730834 -144919462 + L1M2 LINE L1 3447 3779 -2364 3 750 725 281 77 105 chrX 21730991 21731366 -144918930 - RLTR18 LTR ERVK 0 616 111 3 750 513 0 0 0 chrX 21731385 21731442 -144918854 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 750 437 107 0 0 chrX 21731487 21731562 -144918734 - Lx LINE L1 -1 6653 6579 3 750 1695 92 4 0 chrX 21731571 21731809 -144918487 - RLTR9D LTR ERVK -164 239 1 3 750 1291 134 21 13 chrX 21731809 21732043 -144918253 - Lx4B LINE L1 -1204 5854 5639 3 750 714 306 9 9 chrX 21732168 21732379 -144917917 + B3 SINE B2 1 211 -5 3 750 295 220 26 95 chrX 21732404 21732633 -144917663 - Lx9 LINE L1 -15 7629 7389 3 750 253 296 86 18 chrX 21733239 21733459 -144916837 + L1MCb LINE L1 918 1152 -4893 3 750 218 136 23 0 chrX 21733459 21733503 -144916793 + G-rich Low_complexity Low_complexity 6 50 0 3 750 398 336 139 28 chrX 21733560 21733990 -144916306 + Lx7 LINE L1 6947 7438 -35 3 750 1205 258 57 14 chrX 21734138 21734508 -144915788 + Lx5 LINE L1 5910 6295 -755 3 750 185 94 31 0 chrX 21734530 21734562 -144915734 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 750 23 33 0 0 chrX 21734636 21734666 -144915630 + AT_rich Low_complexity Low_complexity 1 30 0 3 750 394 266 302 6 chrX 21734739 21734898 -144915398 + B3 SINE B2 1 206 -10 3 750 278 278 133 15 chrX 21734899 21735162 -144915134 + L1MCb LINE L1 2670 2963 -3601 3 750 417 233 116 48 chrX 21735215 21735404 -144914892 + L1MCb LINE L1 3503 3704 -2860 3 750 248 282 0 78 chrX 21735404 21735421 -144914875 + B4 SINE B4 76 86 -206 3 750 322 258 0 0 chrX 21735421 21735483 -144914813 + PB1D7 SINE Alu 2 63 -57 3 750 225 258 73 31 chrX 21736315 21736411 -144913885 - L1M3de LINE L1 -1894 4835 4736 3 750 347 225 0 14 chrX 21736428 21736500 -144913796 - PB1D9 SINE Alu -3 117 47 3 750 4997 70 3 6 chrX 21736783 21737445 -144912851 - L1_Mus2 LINE L1 0 6566 5907 3 750 24441 118 3 58 chrX 21737445 21740419 -144909877 - L1VL2 LINE L1 -787 5096 2197 3 750 947 124 124 0 chrX 21740419 21740580 -144909716 - B2_Mm1t SINE B2 -6 187 7 3 750 24441 118 3 58 chrX 21740580 21741988 -144908308 - L1VL2 LINE L1 -787 2196 822 3 750 244 118 0 0 chrX 21741958 21741992 -144908304 - MusHAL1 LINE L1 -3270 84 51 3 750 658 215 0 0 chrX 21742000 21742130 -144908166 + L1Md_F LINE L1 573 702 -5817 3 750 768 182 0 0 chrX 21742239 21742376 -144907920 + L1_Mur1 LINE L1 4893 5029 -857 3 750 4670 129 3 3 chrX 21742376 21743100 -144907196 + L1_Mus4 LINE L1 5911 6634 -2 3 750 2079 297 98 29 chrX 21743227 21744088 -144906208 - Lx9 LINE L1 -172 7472 6553 3 750 279 259 108 50 chrX 21744142 21744402 -144905894 - L1M3de LINE L1 -3002 3724 3450 3 750 296 273 32 120 chrX 21744801 21744926 -144905370 + RLTR8 LTR ERVK 252 365 0 3 750 550 277 92 43 chrX 21744983 21745168 -144905128 - Lx8 LINE L1 -459 7014 6821 3 750 410 313 56 17 chrX 21745152 21745331 -144904965 + Lx8 LINE L1 7163 7348 -125 3 750 419 315 9 0 chrX 21745335 21745443 -144904853 + B3A SINE B2 5 113 -85 3 750 325 306 127 20 chrX 21745577 21745774 -144904522 + L1MA5A LINE L1 5672 5889 -408 3 750 281 360 36 14 chrX 21745856 21745994 -144904302 - L1M3de LINE L1 -5672 981 841 3 750 7348 171 47 9 chrX 21746136 21748371 -144901925 - Lx4A LINE L1 -11 7047 4731 3 750 528 68 0 0 chrX 21748427 21748500 -144901796 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 750 446 410 7 11 chrX 21748535 21748809 -144901487 - L1M3de LINE L1 -5596 1057 785 3 750 276 269 42 97 chrX 21748808 21748952 -144901344 - L1M3de LINE L1 -5480 1173 1038 3 750 26 0 0 0 chrX 21748985 21749011 -144901285 + AT_rich Low_complexity Low_complexity 1 26 0 3 750 21 57 0 0 chrX 21749162 21749197 -144901099 + AT_rich Low_complexity Low_complexity 1 35 0 3 750 278 315 26 26 chrX 21749472 21749586 -144900710 + PB1D10 SINE Alu 3 116 -1 3 750 339 296 0 0 chrX 21749596 21749677 -144900619 + ID4 SINE ID 3 83 0 3 750 1639 330 91 34 chrX 21750346 21751075 -144899221 + MER54B LTR ERVL 4 773 -20 3 750 423 0 0 0 chrX 21751846 21751893 -144898403 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 750 1592 242 19 32 chrX 21752152 21752524 -144897772 + ORR1D1 LTR MaLR 1 367 -7 3 750 2610 212 75 14 chrX 21752531 21753115 -144897181 + ORR1D1-int LTR MaLR 1 620 -750 3 750 2841 94 35 19 chrX 21754125 21754548 -144895748 - L1_Mus2 LINE L1 0 6566 6137 3 750 571 238 29 44 chrX 21754599 21754735 -144895561 + B1_Mur1 SINE Alu 14 147 -2 3 750 243 317 19 19 chrX 21755083 21755189 -144895107 - Tigger5 DNA MER2_type -10 2396 2291 3 750 374 370 36 0 chrX 21755184 21755322 -144894974 - Tigger5 DNA MER2_type -2163 243 101 3 750 535 243 80 63 chrX 21755538 21755837 -144894459 + L1MB7 LINE L1 5661 5964 -210 3 750 263 289 50 50 chrX 21756106 21756186 -144894110 - B1F2 SINE Alu -68 81 2 3 750 22 0 0 0 chrX 21756891 21756913 -144893383 + AT_rich Low_complexity Low_complexity 1 22 0 3 750 449 269 51 28 chrX 21757115 21757291 -144893005 + L1_Rod LINE L1 4957 5136 -711 3 750 296 311 173 19 chrX 21757483 21757670 -144892626 - MIRb SINE MIR -44 224 23 3 93 294 209 44 15 chrX 21757944 21758012 -144892284 - MTE2b LTR MaLR 0 379 310 3 751 679 281 44 10 chrX 21758030 21758235 -144892061 - B3 SINE B2 -4 212 1 3 751 277 323 59 45 chrX 21759344 21759769 -144890527 - L1MEc LINE L1 -3644 2675 2246 3 751 748 255 43 18 chrX 21760077 21760241 -144890055 - B3 SINE B2 -48 168 1 3 751 26 0 0 0 chrX 21760517 21760543 -144889753 + AT_rich Low_complexity Low_complexity 1 26 0 3 751 271 317 0 0 chrX 21760852 21760934 -144889362 + Lx9 LINE L1 7208 7289 -355 3 751 237 290 88 20 chrX 21761455 21761557 -144888739 + MIRc SINE MIR 48 156 -112 3 751 1167 255 28 72 chrX 21761577 21761771 -144888525 - ORR1D1 LTR MaLR 0 374 189 3 751 345 47 0 0 chrX 21761771 21761814 -144888482 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 751 1167 255 28 72 chrX 21761814 21761851 -144888445 - ORR1D1 LTR MaLR -186 188 159 3 751 1102 83 0 0 chrX 21761851 21761996 -144888300 - B1_Mus1 SINE Alu -2 146 2 3 751 1167 255 28 72 chrX 21761996 21762152 -144888144 - ORR1D1 LTR MaLR -216 158 3 3 751 625 22 0 11 chrX 21762183 21762274 -144888022 - L1Md_F3 LINE L1 -14 6570 6481 3 751 2011 300 59 23 chrX 21762286 21763016 -144887280 - Lx8 LINE L1 -28 7445 6690 3 751 22 56 0 0 chrX 21763135 21763171 -144887125 + AT_rich Low_complexity Low_complexity 1 36 0 3 751 300 53 0 0 chrX 21763172 21763210 -144887086 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 751 306 0 0 0 chrX 21763210 21763243 -144887053 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 751 1050 320 152 0 chrX 21763303 21763731 -144886565 - Lx8 LINE L1 -607 6866 6374 3 751 30300 132 16 10 chrX 21763790 21768622 -144881674 + L1_Mus1 LINE L1 222 5102 -781 3 751 1116 88 0 0 chrX 21768622 21768769 -144881527 + B1_Mus1 SINE Alu 2 148 0 3 751 30300 89 1 6 chrX 21768769 21770262 -144880034 + L1_Mus1 LINE L1 5103 6567 0 3 751 391 306 40 20 chrX 21770420 21770570 -144879726 - MLT1A0 LTR MaLR -48 317 165 3 751 571 278 8 38 chrX 21770699 21770830 -144879466 - RSINE1 SINE B4 -36 129 3 3 751 380 330 16 124 chrX 21771682 21771876 -144878420 - ID_B1 SINE B4 -8 216 44 3 751 438 20 0 0 chrX 21773237 21773288 -144877008 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 751 1153 51 0 0 chrX 21773402 21773540 -144876756 + B1_Mm SINE Alu 1 138 -9 3 751 218 32 32 0 chrX 21773557 21773588 -144876708 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 751 231 282 183 0 chrX 21774092 21774163 -144876133 - PB1 SINE Alu -7 120 37 3 751 1009 60 8 0 chrX 21775060 21775194 -144875102 - B1_Mm SINE Alu 0 147 13 3 751 850 90 7 15 chrX 21775249 21775384 -144874912 + (GAAA)n Simple_repeat Simple_repeat 2 135 0 3 751 3766 55 4 2 chrX 21775412 21775889 -144874407 - L1Md_F3 LINE L1 -14 6570 6093 3 751 181 386 14 0 chrX 21775980 21776050 -144874246 - L3 LINE CR1 -109 4380 4310 3 751 332 279 64 7 chrX 21777327 21777468 -144872828 - L1MC4a LINE L1 -17 7865 7717 3 751 567 43 0 0 chrX 21777707 21777777 -144872519 + (TA)n Simple_repeat Simple_repeat 1 70 0 4 751 305 306 110 39 chrX 21777847 21778123 -144872173 - L1MDa LINE L1 -5241 1299 991 4 751 309 406 90 7 chrX 21778326 21778770 -144871526 - L1MDa LINE L1 -6125 508 28 4 751 479 296 9 0 chrX 21778797 21778905 -144871391 + PB1D10 SINE Alu 6 114 -3 4 751 675 239 8 0 chrX 21779628 21779758 -144870538 - B1_Mur4 SINE Alu -6 144 14 4 751 351 326 34 41 chrX 21779758 21779775 -144870521 - ID_B1 SINE B4 -6 218 73 4 751 239 346 21 56 chrX 21779954 21780098 -144870198 - MIRc SINE MIR -13 255 117 4 751 217 369 0 0 chrX 21780109 21780174 -144870122 + MIRb SINE MIR 36 100 -168 4 751 698 260 71 10 chrX 21780199 21780397 -144869899 + B3 SINE B2 1 210 -6 4 751 301 269 90 0 chrX 21780412 21780490 -144869806 - Lx9 LINE L1 -740 6904 6820 4 751 1100 277 17 43 chrX 21780488 21780839 -144869457 + Lx9 LINE L1 7073 7414 -230 4 751 2538 183 74 12 chrX 21780940 21781022 -144869274 - RLTR20C LTR ERVK 0 534 436 4 751 396 0 0 0 chrX 21781022 21781066 -144869230 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 751 2538 183 74 12 chrX 21781066 21781486 -144868810 - RLTR20C LTR ERVK -99 435 2 4 751 772 185 52 0 chrX 21783641 21783776 -144866520 + B1_Mus1 SINE Alu 6 147 -1 4 751 213 209 0 0 chrX 21784235 21784302 -144865994 + GA-rich Low_complexity Low_complexity 2 68 0 4 751 408 231 13 0 chrX 21784668 21784746 -144865550 - 5S rRNA rRNA -33 88 10 4 751 963 300 67 49 chrX 21784746 21785135 -144865161 + Lx5 LINE L1 6654 7049 -1 4 751 982 317 105 49 chrX 21785155 21785370 -144864926 + Lx8 LINE L1 6840 7062 -411 4 751 1634 177 89 12 chrX 21785370 21785707 -144864589 + ORR1B2 LTR MaLR 4 366 -1 4 751 982 317 105 49 chrX 21785707 21786081 -144864215 + Lx8 LINE L1 7063 7462 -11 4 751 809 329 35 47 chrX 21786491 21786810 -144863486 - MLT1A1 LTR MaLR -43 365 51 4 751 920 306 70 12 chrX 21787497 21787838 -144862458 - MLT1A1 LTR MaLR 0 408 48 4 751 1352 266 14 23 chrX 21787875 21788306 -144861990 + Lx8 LINE L1 3478 3904 -1976 4 751 718 303 72 84 chrX 21788937 21789473 -144860823 + Lx8 LINE L1 5359 5920 -1553 4 751 213 121 0 0 chrX 21789473 21789506 -144860790 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 4 751 1084 102 0 0 chrX 21789524 21789671 -144860625 + B1_Mus2 SINE Alu 1 147 0 4 751 240 214 0 0 chrX 21789675 21789731 -144860565 + A-rich Low_complexity Low_complexity 1 56 0 4 751 335 303 19 38 chrX 21789973 21790131 -144860165 + Lx8 LINE L1 6970 7124 -349 4 751 737 107 11 45 chrX 21790267 21790444 -144859852 + (CAGAGA)n Simple_repeat Simple_repeat 2 172 0 4 751 522 0 0 0 chrX 21790451 21790509 -144859787 + (GGAA)n Simple_repeat Simple_repeat 3 60 0 4 751 1763 258 130 67 chrX 21790528 21791449 -144858847 + L1_Mur3 LINE L1 327 1305 -6407 4 751 1051 252 29 16 chrX 21791475 21791717 -144858579 + Lx6 LINE L1 7194 7438 -22 4 751 749 219 123 24 chrX 21791920 21792131 -144858165 + Lx2B LINE L1 6763 6994 -6 4 751 225 0 0 0 chrX 21792140 21792165 -144858131 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 751 255 140 0 0 chrX 21792174 21792224 -144858072 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 751 386 157 14 14 chrX 21792224 21792278 -144858018 + polypurine Low_complexity Low_complexity 3 57 0 4 751 1473 39 0 0 chrX 21792278 21792458 -144857838 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 4 751 386 157 14 14 chrX 21792458 21792474 -144857822 + polypurine Low_complexity Low_complexity 58 73 0 4 751 863 178 0 6 chrX 21792474 21792649 -144857647 + GA-rich Low_complexity Low_complexity 3 176 0 4 751 639 0 0 0 chrX 21793286 21793357 -144856939 + (TC)n Simple_repeat Simple_repeat 2 72 0 4 751 225 148 0 9 chrX 21793720 21793765 -144856531 + MIRb SINE MIR 211 256 -12 4 751 379 228 13 0 chrX 21794177 21794256 -144856040 - B3A SINE B2 -117 81 2 4 751 7666 64 21 1 chrX 21794340 21795589 -144854707 + L1_Mus1 LINE L1 5292 6565 -2 4 751 1182 193 207 0 chrX 21796384 21796669 -144853627 + MTC LTR MaLR 70 413 -8 4 751 297 109 0 0 chrX 21796774 21796820 -144853476 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 751 344 262 0 24 chrX 21796822 21796904 -144853392 - Lx8 LINE L1 -357 7116 7037 4 751 663 258 28 38 chrX 21797169 21797395 -144852901 + B3A SINE B2 2 216 0 4 751 980 185 300 53 chrX 21797535 21797834 -144852462 - ORR1C2 LTR MaLR -11 373 1 4 751 30 59 0 0 chrX 21798109 21798160 -144852136 + AT_rich Low_complexity Low_complexity 1 51 0 4 751 638 272 12 0 chrX 21798828 21798978 -144851318 - B3 SINE B2 -5 211 60 4 751 736 154 66 13 chrX 21798978 21799129 -144851167 - RMER4A LTR ERVK 0 466 308 4 751 2387 172 28 36 chrX 21799131 21799601 -144850695 - RMER4A LTR ERVK 0 466 1 4 751 1156 68 7 0 chrX 21799843 21799989 -144850307 + B1_Mus1 SINE Alu 2 148 0 4 751 233 0 62 0 chrX 21799989 21800021 -144850275 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 4 751 353 290 30 82 chrX 21800124 21800259 -144850037 - RSINE1 SINE B4 -32 133 6 4 751 550 308 103 11 chrX 21801619 21802056 -144848240 - L1M2 LINE L1 -717 5451 4970 4 751 231 342 14 14 chrX 21802057 21802131 -144848165 - MIR SINE MIR -160 102 29 4 751 465 250 28 14 chrX 21802133 21802275 -144848021 + Tigger1 DNA MER2_type 1695 1838 -580 4 751 7448 87 13 9 chrX 21803625 21804715 -144845581 + Lx3_Mus LINE L1 5916 7009 0 4 751 477 305 0 8 chrX 21805705 21805837 -144844459 + Tigger1 DNA MER2_type 1942 2072 -346 4 751 484 240 22 101 chrX 21805933 21806072 -144844224 - RSINE1 SINE B4 0 165 38 4 751 346 44 0 0 chrX 21806072 21806117 -144844179 - L1_Mus1 LINE L1 -458 6109 6065 4 751 377 152 0 0 chrX 21806106 21806165 -144844131 + L1_Mus1 LINE L1 6153 6211 -356 4 751 31 58 0 0 chrX 21806324 21806376 -144843920 + AT_rich Low_complexity Low_complexity 1 52 0 4 751 3819 69 98 0 chrX 21806413 21806936 -144843360 + L1_Mus1 LINE L1 5994 6567 0 4 751 555 118 0 0 chrX 21807320 21807405 -144842891 + (GAAA)n Simple_repeat Simple_repeat 2 86 0 4 751 194 125 21 0 chrX 21807476 21807524 -144842772 + (CAAAAA)n Simple_repeat Simple_repeat 4 52 0 4 751 398 275 20 61 chrX 21807583 21807730 -144842566 + B1F1 SINE Alu 2 142 -7 4 751 345 217 0 0 chrX 21807767 21807827 -144842469 + B3A SINE B2 2 61 -137 4 751 339 352 43 0 chrX 21808172 21808334 -144841962 + L1M2 LINE L1 4549 4717 -1426 4 751 204 244 0 44 chrX 21808336 21808426 -144841870 + A-rich Low_complexity Low_complexity 4 89 0 4 751 302 352 0 0 chrX 21808505 21808576 -144841720 - ID4 SINE ID -5 78 8 4 751 289 369 38 63 chrX 21808905 21809142 -144841154 - L2 LINE L2 -624 2795 2565 4 751 3876 187 63 33 chrX 21809276 21810037 -144840259 + Lx5 LINE L1 6258 7047 -3 4 751 634 337 66 27 chrX 21810873 21811132 -144839164 + B4A SINE B4 1 269 -23 4 751 486 33 0 0 chrX 21811134 21811194 -144839102 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 751 366 23 0 0 chrX 21811854 21811897 -144838399 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 4 751 1043 98 7 0 chrX 21811899 21812042 -144838254 - B1_Mus1 SINE Alu -4 144 1 4 751 669 231 130 0 chrX 21812144 21812313 -144837983 + MTC LTR MaLR 3 193 -226 4 751 2140 214 82 92 chrX 21812304 21813091 -144837205 - RMER17B LTR ERVK -235 723 1 4 751 1280 171 4 9 chrX 21813091 21813321 -144836975 + MTC LTR MaLR 185 413 -8 4 751 234 0 0 0 chrX 21813339 21813365 -144836931 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 4 751 435 327 79 31 chrX 21814144 21814371 -144835925 + MLT1E2 LTR MaLR 1 238 -389 4 751 228 208 68 14 chrX 21814521 21814594 -144835702 + Lx4B LINE L1 6945 7021 -37 4 751 2447 183 5 0 chrX 21815265 21815669 -144834627 - Lx5 LINE L1 -434 6616 6211 4 751 2179 202 20 2 chrX 21815669 21816071 -144834225 + Lx5 LINE L1 6633 7041 -9 4 751 914 227 55 15 chrX 21816245 21816446 -144833850 + B3 SINE B2 1 209 -7 4 751 294 203 0 0 chrX 21816456 21816515 -144833781 - Lx9 LINE L1 -390 7254 7196 4 751 785 236 105 4 chrX 21816515 21816791 -144833505 + Lx9 LINE L1 7341 7644 0 4 751 2184 111 35 0 chrX 21817046 21817361 -144832935 - ORR1A3 LTR MaLR 0 326 1 4 751 520 308 26 47 chrX 21817898 21818130 -144832166 + L1MC LINE L1 5470 5696 -2186 4 751 1060 285 99 52 chrX 21818362 21818936 -144831360 - Lx8 LINE L1 -33 7440 6840 4 751 314 281 94 72 chrX 21818937 21819019 -144831277 + RSINE1 SINE B4 22 102 -63 4 751 1034 122 96 10 chrX 21819019 21819217 -144831079 + Lx LINE L1 6440 6654 0 4 751 314 281 94 72 chrX 21819217 21819272 -144831024 + RSINE1 SINE B4 103 162 -3 4 751 317 310 70 0 chrX 21819342 21819484 -144830812 - RMER15 LTR ERVL -18 557 406 4 751 696 215 14 0 chrX 21819901 21820045 -144830251 - B1_Mur2 SINE Alu -1 148 3 4 751 607 189 34 20 chrX 21821160 21821306 -144828990 - L1MC4 LINE L1 -1131 6911 6764 4 751 357 271 131 1 chrX 21821595 21821748 -144828548 + L1MA9 LINE L1 5879 6048 -243 4 751 329 306 110 52 chrX 21821754 21821795 -144828501 + ID_B1 SINE B4 51 214 -10 4 751 564 167 149 0 chrX 21821795 21821909 -144828387 + B1_Mur4 SINE Alu 10 140 -10 4 751 210 37 0 0 chrX 21821909 21821936 -144828360 + (CAA)n Simple_repeat Simple_repeat 2 28 0 4 751 545 278 33 28 chrX 21822039 21822220 -144828076 + B3A SINE B2 1 182 -16 4 751 24 0 0 0 chrX 21822355 21822379 -144827917 + AT_rich Low_complexity Low_complexity 1 24 0 4 751 3016 63 2 22 chrX 21822936 21823340 -144826956 + MTA_Mm LTR MaLR 1 396 0 4 751 287 148 0 36 chrX 21823844 21823928 -144826368 + T-rich Low_complexity Low_complexity 1 81 0 4 751 40 21 0 0 chrX 21826562 21826609 -144823687 + AT_rich Low_complexity Low_complexity 1 47 0 4 751 3613 74 6 2 chrX 21827397 21827902 -144822394 - L1_Mus3 LINE L1 0 6638 6149 4 751 30 59 0 0 chrX 21828392 21828443 -144821853 + AT_rich Low_complexity Low_complexity 1 51 0 4 751 21 0 0 0 chrX 21828454 21828475 -144821821 + AT_rich Low_complexity Low_complexity 1 21 0 4 751 411 216 63 0 chrX 21828475 21828586 -144821710 + Lx9 LINE L1 7505 7622 -22 5 751 561 80 0 0 chrX 21828774 21828862 -144821434 + (TC)n Simple_repeat Simple_repeat 1 88 0 5 751 327 25 0 0 chrX 21828862 21828902 -144821394 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 751 323 88 18 0 chrX 21828982 21829039 -144821257 + Lx9 LINE L1 7582 7639 -5 5 751 56 79 0 0 chrX 21829211 21829337 -144820959 + AT_rich Low_complexity Low_complexity 1 126 0 5 751 230 254 0 92 chrX 21829404 21829419 -144820877 - B1_Mus1 SINE Alu -79 69 56 5 751 180 0 0 0 chrX 21829419 21829439 -144820857 + (TCTA)n Simple_repeat Simple_repeat 2 21 0 5 751 230 254 0 92 chrX 21829439 21829488 -144820808 - B1_Mus1 SINE Alu -93 55 11 5 751 218 278 0 69 chrX 21829440 21829498 -144820798 - B4 SINE B4 -154 138 85 5 751 264 292 100 40 chrX 21829675 21829825 -144820471 - MER104 DNA Tc2 -3 178 20 5 751 877 223 85 0 chrX 21829919 21830107 -144820189 - B3 SINE B2 -11 205 2 5 751 246 353 0 72 chrX 21830108 21830233 -144820063 - MIRc SINE MIR -115 153 38 5 751 736 138 0 0 chrX 21830441 21830550 -144819746 + B1_Mur3 SINE Alu 41 149 0 5 751 4103 149 38 23 chrX 21830617 21831358 -144818938 + RMER6A LTR ERVK 2 753 -3 5 751 23 33 0 0 chrX 21831511 21831541 -144818755 + AT_rich Low_complexity Low_complexity 1 30 0 5 751 485 259 103 8 chrX 21831607 21831724 -144818572 - B3 SINE B2 -5 211 84 5 751 24 0 0 0 chrX 21831824 21831848 -144818448 + AT_rich Low_complexity Low_complexity 1 24 0 5 751 1691 199 28 68 chrX 21831980 21832379 -144817917 + ORR1C2 LTR MaLR 2 384 0 5 751 1573 207 130 28 chrX 21832379 21832936 -144817360 + ORR1C2-int LTR MaLR 1 424 -1085 5 751 240 376 75 0 chrX 21833116 21833209 -144817087 + B1F SINE Alu 2 101 -48 5 751 1278 224 60 0 chrX 21833418 21833686 -144816610 - Lx3C LINE L1 -4 6972 6689 5 751 3841 137 25 5 chrX 21833685 21834462 -144815834 + Lx3C LINE L1 5501 6300 -676 5 751 25 0 0 0 chrX 21834547 21834572 -144815724 + AT_rich Low_complexity Low_complexity 1 25 0 5 751 527 269 7 0 chrX 21834700 21834841 -144815455 - Lx7 LINE L1 -348 7348 7207 5 751 263 297 13 13 chrX 21834992 21835067 -144815229 - ID4_ SINE ID -5 78 4 5 751 224 293 51 39 chrX 21835192 21835270 -144815026 - ID4_ SINE ID -3 80 2 5 751 1376 126 88 57 chrX 21835510 21835772 -144814524 + RMER21B LTR ERV1 1 270 -572 5 751 189 0 0 0 chrX 21835839 21835860 -144814436 + (T)n Simple_repeat Simple_repeat 1 21 0 5 751 365 297 47 94 chrX 21836014 21836165 -144814131 + RSINE1 SINE B4 3 146 -19 5 751 414 0 0 0 chrX 21836165 21836211 -144814085 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 751 365 297 47 94 chrX 21836211 21836230 -144814066 + RSINE1 SINE B4 147 165 0 5 751 446 217 11 21 chrX 21836568 21836662 -144813634 + PB1D9 SINE Alu 23 115 -5 5 751 1931 163 12 6 chrX 21836863 21837190 -144813106 + ORR1A4 LTR MaLR 1 329 0 5 751 309 51 0 0 chrX 21837593 21837632 -144812664 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 751 314 370 42 23 chrX 21837657 21837873 -144812423 + L1M4 LINE L1 4502 4721 -1425 5 751 23 0 0 0 chrX 21838021 21838044 -144812252 + AT_rich Low_complexity Low_complexity 1 23 0 5 751 231 260 0 0 chrX 21838463 21838513 -144811783 + L1M4 LINE L1 5509 5558 -615 5 751 762 86 0 0 chrX 21838919 21839035 -144811261 + (TA)n Simple_repeat Simple_repeat 2 117 0 5 751 282 200 0 0 chrX 21839103 21839153 -144811143 - Lx9 LINE L1 -245 7399 7350 5 751 32 57 0 0 chrX 21839178 21839231 -144811065 + AT_rich Low_complexity Low_complexity 1 53 0 5 751 226 367 78 8 chrX 21839232 21839361 -144810935 - MLT1A0 LTR MaLR -6 359 222 5 751 338 269 0 13 chrX 21839413 21839492 -144810804 - ID4 SINE ID -4 79 2 5 751 1777 215 110 10 chrX 21839514 21840012 -144810284 + Lx7 LINE L1 5603 6150 -1546 5 751 496 268 166 22 chrX 21840043 21840197 -144810099 + Lx7 LINE L1 7359 7550 -146 5 751 360 0 0 0 chrX 21840197 21840237 -144810059 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 5 751 496 268 166 22 chrX 21840237 21840360 -144809936 + Lx7 LINE L1 7551 7676 -20 5 751 1306 248 65 17 chrX 21840455 21840808 -144809488 - ORR1D2 LTR MaLR 0 370 1 5 751 335 345 15 30 chrX 21841152 21841355 -144808941 - L1MC4a LINE L1 -510 7372 7173 5 751 593 191 36 0 chrX 21841384 21841494 -144808802 - MTC LTR MaLR -76 345 232 5 751 1283 95 17 0 chrX 21841541 21841720 -144808576 - B2_Mm1t SINE B2 -10 183 2 5 751 21 0 0 0 chrX 21841743 21841764 -144808532 + AT_rich Low_complexity Low_complexity 1 21 0 5 751 348 246 174 25 chrX 21841806 21841927 -144808369 - B1_Mur1 SINE Alu -8 141 3 5 751 304 265 77 19 chrX 21841939 21842043 -144808253 - L1MC4a LINE L1 -816 7066 6957 5 751 310 185 46 0 chrX 21842066 21842131 -144808165 + LTR53 LTR ERVL 31 98 -421 5 751 584 321 57 5 chrX 21842197 21842391 -144807905 + LTR53 LTR ERVL 251 454 -65 5 751 17581 85 7 1 chrX 21842391 21844830 -144805466 + L1Md_F2 LINE L1 3134 5586 -297 5 751 7313 83 5 8 chrX 21844830 21845828 -144804468 + L1Md_F2 LINE L1 5587 6581 -1 5 751 286 204 76 0 chrX 21846846 21846978 -144803318 + RMER17D LTR ERVK 363 504 -385 5 751 316 283 54 11 chrX 21846945 21847038 -144803258 - PB1 SINE Alu -2 125 29 5 751 875 54 9 0 chrX 21847183 21847316 -144802980 + L1Md_F2 LINE L1 6225 6363 -219 5 751 371 259 20 14 chrX 21847722 21847828 -144802468 + B1_Mus2 SINE Alu 13 120 0 5 751 297 261 60 17 chrX 21847892 21848009 -144802287 - Lx9 LINE L1 -1631 6013 5892 5 751 1314 295 35 131 chrX 21848084 21848341 -144801955 - Lx9 LINE L1 -17 5830 5570 5 751 546 16 0 0 chrX 21848341 21848404 -144801892 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 751 1314 295 35 131 chrX 21848404 21848496 -144801800 - Lx9 LINE L1 -278 5569 5517 5 751 208 77 25 25 chrX 21848496 21848536 -144801760 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 751 3129 201 15 38 chrX 21848536 21849314 -144800982 - Lx9 LINE L1 -331 5516 4826 5 751 411 306 83 8 chrX 21849310 21849564 -144800732 - L1M2 LINE L1 -502 5810 5538 5 751 212 265 41 0 chrX 21850308 21850357 -144799939 + ID4_ SINE ID 5 55 -28 5 751 204 288 60 15 chrX 21850689 21850756 -144799540 - L4 LINE RTE -1662 367 298 5 751 4542 226 58 38 chrX 21851377 21852530 -144797766 - Lx7 LINE L1 -3 7693 6518 5 751 361 364 80 20 chrX 21852602 21852801 -144797495 - LTR53 LTR ERVL -293 226 16 5 751 219 323 15 0 chrX 21853235 21853300 -144796996 - ID SINE ID -157 67 2 5 751 395 286 8 8 chrX 21853583 21853703 -144796593 - LTR69 LTR ERVL -1 587 468 5 751 718 298 29 66 chrX 21853694 21853967 -144796329 - LTR69 LTR ERVL -313 275 13 5 751 198 0 0 0 chrX 21854612 21854634 -144795662 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 751 1272 42 0 0 chrX 21855409 21855576 -144794720 + (CA)n Simple_repeat Simple_repeat 1 167 0 5 751 24 0 0 0 chrX 21855775 21855799 -144794497 + AT_rich Low_complexity Low_complexity 1 24 0 5 751 474 306 43 7 chrX 21857389 21857527 -144792769 + RSINE1 SINE B4 4 146 -19 5 751 438 20 0 0 chrX 21857530 21857581 -144792715 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 751 1717 75 0 4 chrX 21857854 21858082 -144792214 - L1_Mus1 LINE L1 -1 6566 6340 5 751 1394 62 0 0 chrX 21858082 21858260 -144792036 + L1_Mm LINE L1 4962 5139 -744 5 751 23 54 0 0 chrX 21859213 21859250 -144791046 + AT_rich Low_complexity Low_complexity 1 37 0 5 751 216 253 34 22 chrX 21859334 21859423 -144790873 + A-rich Low_complexity Low_complexity 2 91 0 5 751 534 302 31 0 chrX 21859932 21860061 -144790235 + B1_Mur3 SINE Alu 1 133 -16 5 751 585 216 32 39 chrX 21860368 21860522 -144789774 + L1_Rod LINE L1 5600 5752 -95 5 751 725 314 47 0 chrX 21860523 21860695 -144789601 - B4A SINE B4 -112 180 1 5 751 489 34 0 0 chrX 21860788 21860847 -144789449 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 751 1671 203 21 50 chrX 21860888 21861331 -144788965 - Lx9 LINE L1 -1698 5946 5481 5 751 343 277 44 18 chrX 21861904 21862018 -144788278 + L1MC3 LINE L1 7259 7375 -410 5 751 390 297 76 8 chrX 21862278 21862397 -144787899 + ID_B1 SINE B4 87 213 -11 5 751 558 0 0 0 chrX 21862397 21862459 -144787837 + (TAAAA)n Simple_repeat Simple_repeat 2 63 0 5 751 372 284 2 2 chrX 21862554 21862656 -144787640 - B4 SINE B4 -119 105 4 5 751 180 0 0 0 chrX 21863096 21863116 -144787180 + (T)n Simple_repeat Simple_repeat 1 20 0 5 751 21 36 0 0 chrX 21863198 21863226 -144787070 + AT_rich Low_complexity Low_complexity 1 28 0 5 751 202 118 29 0 chrX 21863301 21863335 -144786961 + (TC)n Simple_repeat Simple_repeat 1 35 0 5 751 594 75 0 0 chrX 21863431 21863511 -144786785 + (GA)n Simple_repeat Simple_repeat 2 81 0 5 751 300 330 0 0 chrX 21863515 21863630 -144786666 - Lx7 LINE L1 -395 7301 7187 5 751 459 351 97 10 chrX 21863640 21863847 -144786449 - B4 SINE B4 -67 225 1 5 751 248 221 91 112 chrX 21864814 21864957 -144785339 - MER53 DNA hAT -41 152 13 5 751 19734 50 8 1 chrX 21865125 21867617 -144782679 + L1Md_F2 LINE L1 3077 5586 -297 5 751 7624 54 16 2 chrX 21867617 21868598 -144781698 + L1Md_F2 LINE L1 5587 6581 -1 5 751 1485 243 88 53 chrX 21868729 21869277 -144781019 + RMER2 LTR ERV1 1 567 0 5 751 520 290 61 61 chrX 21869319 21869340 -144780956 + ID SINE ID 20 40 -184 5 751 974 206 131 46 chrX 21869340 21869646 -144780650 + IAPEY3_LTR LTR ERVK 1 332 0 5 751 520 290 61 61 chrX 21869646 21869822 -144780474 + ID_B1 SINE B4 41 217 -7 5 751 2255 45 14 0 chrX 21869840 21870130 -144780166 + L1Md_F2 LINE L1 6289 6582 0 5 751 531 263 14 26 chrX 21870136 21870307 -144779989 + B3 SINE B2 27 187 -8 5 751 345 232 29 189 chrX 21870329 21870498 -144779798 + RSINE1 SINE B4 13 153 -12 5 751 204 40 0 0 chrX 21870498 21870523 -144779773 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 751 3153 68 0 0 chrX 21871401 21871811 -144778485 + L1Md_A LINE L1 6173 6582 0 5 751 189 0 0 0 chrX 21871825 21871846 -144778450 + (A)n Simple_repeat Simple_repeat 1 21 0 5 751 728 339 63 33 chrX 21872041 21872407 -144777889 - Lx7 LINE L1 -396 7300 6924 5 751 3276 196 69 27 chrX 21872612 21873383 -144776913 + RLTR40 LTR ERVK 15 817 0 5 751 323 257 30 0 chrX 21873797 21873898 -144776398 - MTEa LTR MaLR -8 371 268 5 751 495 327 77 0 chrX 21874719 21874887 -144775409 - B3A SINE B2 -12 186 6 6 751 1155 184 63 0 chrX 21874861 21875068 -144775228 + URR1A DNA MER1_type 7 226 0 6 751 310 125 0 0 chrX 21875071 21875119 -144775177 - B3 SINE B2 -168 48 1 6 751 783 32 0 0 chrX 21876361 21876455 -144773841 + (GGAGA)n Simple_repeat Simple_repeat 1 94 0 6 751 203 296 0 47 chrX 21876566 21876651 -144773645 + GA-rich Low_complexity Low_complexity 1 81 0 6 751 253 109 36 0 chrX 21876888 21876943 -144773353 + (TTTTG)n Simple_repeat Simple_repeat 4 60 0 6 751 27 0 0 0 chrX 21877166 21877193 -144773103 + AT_rich Low_complexity Low_complexity 1 27 0 6 751 2994 180 93 39 chrX 21877196 21877261 -144773035 + Lx5 LINE L1 5661 5725 -1325 6 751 210 37 0 0 chrX 21877261 21877288 -144773008 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 6 751 2994 180 93 39 chrX 21877288 21877898 -144772398 + Lx5 LINE L1 5726 6372 -678 6 751 315 49 0 0 chrX 21878568 21878609 -144771687 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 751 386 349 136 9 chrX 21878744 21878958 -144771338 - L2 LINE L2 -385 3034 2794 6 751 1222 206 55 68 chrX 21879009 21879212 -144771084 + Lx9 LINE L1 7263 7447 -197 6 751 525 58 0 0 chrX 21879212 21879281 -144771015 + (TA)n Simple_repeat Simple_repeat 2 70 0 6 751 1222 206 55 68 chrX 21879281 21879457 -144770839 + Lx9 LINE L1 7448 7637 -7 6 751 234 81 0 0 chrX 21879926 21879963 -144770333 + (A)n Simple_repeat Simple_repeat 1 37 0 6 751 232 179 71 0 chrX 21879963 21880019 -144770277 + L1MB4 LINE L1 156 215 -6392 6 751 460 312 19 42 chrX 21880065 21880279 -144770017 - B3 SINE B2 -6 210 2 6 751 953 252 97 7 chrX 21880675 21881053 -144769243 + L1MB3 LINE L1 5701 6120 -54 6 751 887 290 88 3 chrX 21881083 21881412 -144768884 + Lx8 LINE L1 6602 6958 -515 6 751 601 293 196 7 chrX 21881487 21881762 -144768534 - Lx9 LINE L1 -917 6727 6401 6 751 1768 241 78 34 chrX 21882002 21882379 -144767917 - Lx9 LINE L1 -1688 5956 5535 6 751 192 40 0 0 chrX 21882379 21882404 -144767892 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 6 751 1768 234 81 37 chrX 21882404 21882669 -144767627 - Lx9 LINE L1 -313 5534 5252 6 751 2513 278 45 142 chrX 21883465 21883524 -144766772 - L1_Mur3 LINE L1 -623 5257 5206 6 751 4291 39 2 0 chrX 21883524 21884038 -144766258 + L1Md_F2 LINE L1 6056 6570 -12 6 751 771 11 0 0 chrX 21884045 21884133 -144766163 + (GAA)n Simple_repeat Simple_repeat 2 89 0 6 751 2513 278 45 142 chrX 21884133 21885918 -144764378 - L1_Mur3 LINE L1 -678 5202 3574 6 751 1298 67 0 16 chrX 21885918 21886101 -144764195 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 6 751 2513 278 45 142 chrX 21886101 21886138 -144764158 - L1_Mur3 LINE L1 -2307 3573 3555 6 751 3514 49 50 28 chrX 21886138 21886601 -144763695 + L1_Mus1 LINE L1 6094 6566 -1 6 751 2513 278 45 142 chrX 21886601 21887076 -144763220 - L1_Mur3 LINE L1 -2326 3554 3122 6 751 569 302 0 0 chrX 21887443 21887582 -144762714 + B1_Mur2 SINE Alu 10 148 -1 6 751 446 61 15 0 chrX 21887682 21887748 -144762548 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 6 751 3698 184 26 70 chrX 21887749 21888567 -144761729 - Lx5 LINE L1 -15 7035 6254 6 752 1570 98 93 4 chrX 21890718 21890964 -144759332 - L1_Mus3 LINE L1 -1 6637 6370 6 752 313 286 158 25 chrX 21891219 21891377 -144758919 + MER63A DNA AcHobo 32 210 0 6 752 743 317 21 30 chrX 21891658 21891892 -144758404 - B4A SINE B4 -10 282 51 6 752 21 36 0 0 chrX 21892623 21892651 -144757645 + AT_rich Low_complexity Low_complexity 1 28 0 6 752 316 281 0 37 chrX 21893512 21893619 -144756677 + L1MA7 LINE L1 6163 6265 -26 6 752 2111 118 26 12 chrX 21893973 21894317 -144755979 - Lx LINE L1 -9 6645 6297 6 752 468 0 0 0 chrX 21895651 21895703 -144754593 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 752 211 150 0 48 chrX 21895787 21895829 -144754467 - PB1D9 SINE Alu -5 115 76 6 752 5582 149 64 28 chrX 21899431 21900493 -144749803 + RLTR25A LTR ERVK 1 1100 -3 6 752 404 255 59 20 chrX 21900498 21900650 -144749646 + MER53 DNA hAT 26 183 -10 6 752 315 312 0 0 chrX 21900793 21900857 -144749439 - ID4 SINE ID -3 80 17 6 752 7906 51 2 0 chrX 21900897 21901872 -144748424 + L1Md_F2 LINE L1 5594 6570 -12 6 752 200 286 170 31 chrX 21902054 21902213 -144748083 - L3 LINE CR1 -209 4280 4100 6 752 263 348 62 0 chrX 21902258 21902370 -144747926 - L2a LINE L2 -16 3410 3292 6 752 507 148 0 0 chrX 21903477 21903565 -144746731 + (TA)n Simple_repeat Simple_repeat 1 88 0 6 752 894 298 5 5 chrX 21903648 21903854 -144746442 + B3 SINE B2 6 211 -5 6 752 4080 128 21 52 chrX 21903929 21904787 -144745509 + L1VL4 LINE L1 226 1052 -2507 6 752 2268 69 20 78 chrX 21904793 21905140 -144745156 + IAPLTR2b LTR ERVK 1 327 0 6 752 23 54 0 0 chrX 21905193 21905230 -144745066 + AT_rich Low_complexity Low_complexity 1 37 0 6 752 306 206 113 36 chrX 21905419 21905581 -144744715 + L1_Mur3 LINE L1 5318 5526 -774 6 752 7332 102 15 2 chrX 21906912 21908250 -144742046 - L1_Mus3 LINE L1 -6 6632 5277 6 752 4209 146 11 14 chrX 21908249 21908964 -144741332 + L1_Mm LINE L1 4443 5155 -728 6 752 775 227 0 20 chrX 21908994 21909147 -144741149 + B1_Mur4 SINE Alu 1 150 0 6 752 21 82 0 0 chrX 21909147 21909196 -144741100 + AT_rich Low_complexity Low_complexity 1 49 0 6 752 22 0 0 0 chrX 21909261 21909283 -144741013 + AT_rich Low_complexity Low_complexity 1 22 0 6 752 301 293 31 47 chrX 21910264 21910393 -144739903 + MIR SINE MIR 118 244 -18 6 752 969 289 6 45 chrX 21910453 21910764 -144739532 + Lx8 LINE L1 6908 7206 -267 6 752 1598 126 11 0 chrX 21910790 21911053 -144739243 + Lx2A1 LINE L1 6743 7008 0 6 752 25 0 0 0 chrX 21911056 21911081 -144739215 + AT_rich Low_complexity Low_complexity 1 25 0 6 752 531 112 0 0 chrX 21911158 21911238 -144739058 + (CA)n Simple_repeat Simple_repeat 1 80 0 6 752 511 338 126 5 chrX 21911728 21911951 -144738345 - LTR75 LTR ERVL -24 538 289 6 752 253 267 0 0 chrX 21911951 21912011 -144738285 + B2_Mm2 SINE B2 1 60 -135 6 752 433 279 72 55 chrX 21912087 21912502 -144737794 + L1_Rod LINE L1 5290 5787 -504 6 752 21 0 0 0 chrX 21913276 21913297 -144736999 + AT_rich Low_complexity Low_complexity 1 21 0 6 752 285 314 76 49 chrX 21913858 21914082 -144736214 + Lx8 LINE L1 7244 7473 0 6 752 189 197 145 16 chrX 21914386 21914448 -144735848 + L2 LINE L2 2372 2441 -978 6 752 7918 60 0 4 chrX 21914544 21915805 -144734491 - L1Md_F2 LINE L1 -2 6580 5325 6 752 6358 85 1 1 chrX 21915794 21916665 -144733631 + L1Md_F2 LINE L1 4460 5330 -553 6 752 29606 64 2 1 chrX 21916682 21921286 -144729010 - L1Md_F2 LINE L1 -1 6581 1974 6 752 235 253 22 22 chrX 21923352 21923441 -144726855 - L1M2 LINE L1 -494 5806 5718 6 752 4849 50 2 2 chrX 21924367 21924971 -144725325 + L1Md_F2 LINE L1 5967 6570 -12 6 752 1169 124 27 0 chrX 21925025 21925210 -144725086 - B2_Mm2 SINE B2 -4 191 2 6 752 486 0 0 0 chrX 21925426 21925480 -144724816 + (GA)n Simple_repeat Simple_repeat 2 55 0 6 752 6156 130 58 9 chrX 21925808 21926540 -144723756 + L1Md_F2 LINE L1 184 948 -5668 6 752 3504 59 0 0 chrX 21926540 21926980 -144723316 + L1Md_F3 LINE L1 6144 6583 -1 6 752 31427 85 7 2 chrX 21926980 21931591 -144718705 + L1Md_F2 LINE L1 949 5585 -298 6 752 7388 72 4 7 chrX 21931592 21932591 -144717705 + L1Md_F2 LINE L1 5587 6582 0 6 752 1818 157 8 87 chrX 21932935 21933290 -144717006 + ORR1A2 LTR MaLR 1 327 0 6 752 419 340 35 39 chrX 21933832 21934086 -144716210 + MLT1E1A LTR MaLR 69 321 -359 6 752 359 339 144 5 chrX 21934119 21934306 -144715990 + MLT1E1A LTR MaLR 427 639 -14 6 752 496 273 85 27 chrX 21935507 21935767 -144714529 - L1MA9 LINE L1 -361 5951 5677 6 752 3263 188 34 9 chrX 21935921 21936576 -144713720 + Lx5 LINE L1 5111 5781 -96 6 752 8780 155 7 7 chrX 21936575 21938535 -144711761 + Lx2 LINE L1 5031 6997 0 6 752 1186 139 11 1 chrX 21938514 21938725 -144711571 + Lx5 LINE L1 5760 5983 -1067 6 752 1795 282 43 84 chrX 21938727 21939644 -144710652 + RMER17B LTR ERVK 1 821 -137 6 752 399 309 26 78 chrX 21939651 21939844 -144710452 + Lx8 LINE L1 7218 7400 -73 6 752 310 195 0 54 chrX 21940195 21940287 -144710009 + Lx7 LINE L1 7610 7696 0 6 752 256 262 47 28 chrX 21940933 21941039 -144709257 - Charlie1a DNA MER1_type -39 1416 1309 6 752 1280 272 45 34 chrX 21941373 21941748 -144708548 - MTE2b LTR MaLR 0 359 5 6 752 21 36 0 0 chrX 21942041 21942069 -144708227 + AT_rich Low_complexity Low_complexity 1 28 0 6 752 201 289 94 19 chrX 21942155 21942261 -144708035 - MIR SINE MIR 0 262 149 6 752 246 182 0 0 chrX 21942353 21942419 -144707877 + GA-rich Low_complexity Low_complexity 2 67 0 6 752 365 279 159 24 chrX 21942502 21942795 -144707501 + L1MD LINE L1 5279 5606 -556 6 752 1345 270 33 8 chrX 21942975 21943341 -144706955 + MTE2a LTR MaLR 1 375 -4 6 752 417 227 99 13 chrX 21943403 21943555 -144706741 - L1MA4 LINE L1 -385 5915 5751 6 752 1186 296 74 26 chrX 21943652 21944114 -144706182 - Lx8 LINE L1 -861 6612 6129 6 752 260 305 32 19 chrX 21944499 21944656 -144705640 - Lx7 LINE L1 -1795 5901 5743 6 752 712 195 24 0 chrX 21944971 21945094 -144705202 + B1_Mur3 SINE Alu 11 136 -13 6 752 438 20 0 0 chrX 21945094 21945145 -144705151 + (CAAA)n Simple_repeat Simple_repeat 1 51 0 6 752 468 51 0 0 chrX 21945185 21945244 -144705052 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 6 752 242 311 84 37 chrX 21945338 21945445 -144704851 + MER63A DNA AcHobo 13 124 -86 6 752 3906 81 15 2 chrX 21945471 21946018 -144704278 - L1_Mm LINE L1 -45 5838 5285 6 752 848 61 0 0 chrX 21946003 21946118 -144704178 - L1_Mm LINE L1 -767 5116 5002 6 752 6090 44 19 0 chrX 21946118 21946862 -144703434 + L1Md_F2 LINE L1 5814 6571 -11 6 752 23 33 0 0 chrX 21947470 21947500 -144702796 + AT_rich Low_complexity Low_complexity 1 30 0 6 752 440 289 89 67 chrX 21947534 21947816 -144702480 + L1ME2z LINE L1 5329 5616 -548 6 752 327 288 39 0 chrX 21947819 21947972 -144702324 + L1ME2z LINE L1 5833 5991 -453 6 752 547 314 77 6 chrX 21948391 21948561 -144701735 + B3 SINE B2 35 216 0 6 752 580 208 196 26 chrX 21948588 21948741 -144701555 + B2_Mm2 SINE B2 1 179 -16 6 752 19339 132 7 67 chrX 21948770 21950422 -144699874 + L1_Mus3 LINE L1 403 2033 -3850 6 752 1093 88 7 0 chrX 21950422 21950569 -144699727 + B1_Mus1 SINE Alu 1 148 0 7 752 19339 143 9 103 chrX 21950569 21955793 -144694503 + L1_Mus3 LINE L1 2034 6631 -7 6 752 1466 117 5 0 chrX 21956343 21956565 -144693731 - Lx2 LINE L1 0 6997 6775 7 752 528 157 0 0 chrX 21956565 21956654 -144693642 - Lx2 LINE L1 -354 6643 6555 7 752 552 299 14 50 chrX 21956927 21957145 -144693151 + B3 SINE B2 3 212 -4 7 752 5875 156 18 8 chrX 21957347 21958351 -144691945 - Lx3C LINE L1 -7 6969 5956 7 752 340 274 12 0 chrX 21958441 21958525 -144691771 + L2a LINE L2 3342 3426 0 7 752 297 0 0 0 chrX 21960447 21960480 -144689816 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 752 228 202 108 116 chrX 21960553 21960682 -144689614 + MER53 DNA hAT 44 171 -22 7 752 4045 147 4 56 chrX 21960780 21961496 -144688800 + Lx4A LINE L1 6380 7058 0 7 752 194 326 0 0 chrX 21961513 21961556 -144688740 + MIR3 SINE MIR 117 159 -49 7 752 1872 99 31 22 chrX 21961568 21961887 -144688409 + RLTRETN_Mm LTR ERVK 1 322 0 7 752 17425 163 32 23 chrX 21961887 21968734 -144681562 + ETnERV2-int LTR ERVK 1 7208 -198 7 752 1827 103 31 25 chrX 21968734 21969054 -144681242 + RLTRETN_Mm LTR ERVK 1 322 0 7 752 544 271 53 0 chrX 21969182 21969315 -144680981 - LSU-rRNA_Hsa rRNA rRNA -2438 2597 2458 7 752 21 0 0 0 chrX 21969772 21969793 -144680503 + AT_rich Low_complexity Low_complexity 1 21 0 7 752 3041 84 32 7 chrX 21970994 21971436 -144678860 + L1_Mus3 LINE L1 6183 6635 -3 7 752 524 243 78 0 chrX 21971776 21971982 -144678314 - L1MA8 LINE L1 -28 6263 6042 7 752 764 50 0 10 chrX 21972015 21972117 -144678179 + (TATATG)n Simple_repeat Simple_repeat 6 106 0 7 752 378 61 0 0 chrX 21972148 21972197 -144678099 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 752 2742 72 30 0 chrX 21972431 21972794 -144677502 - L1_Mus1 LINE L1 0 6567 6194 7 752 8879 139 5 34 chrX 21972794 21974813 -144675483 - L1Md_F LINE L1 -1840 4043 2229 7 752 4308 26 0 0 chrX 21974827 21975320 -144674976 + MT2_Mm LTR ERVL 1 493 0 7 752 43875 28 11 0 chrX 21975320 21980633 -144669663 + MERVL-int LTR ERVL 1 5371 -114 7 752 304 167 27 40 chrX 21980633 21980708 -144669588 + ORR1A3-int LTR MaLR 567 640 -1323 7 752 302 0 0 0 chrX 21980708 21980746 -144669550 + MERVL-int LTR ERVL 5448 5485 0 7 752 4222 29 6 0 chrX 21980746 21981236 -144669060 + MT2_Mm LTR ERVL 1 493 0 7 752 762 89 9 0 chrX 21981237 21981349 -144668947 - L1Md_F LINE L1 -3669 2214 2102 7 752 295 53 0 0 chrX 21981350 21981388 -144668908 + MT2_Mm LTR ERVL 456 493 0 7 752 6340 160 35 62 chrX 21981389 21983405 -144666891 - L1Md_F LINE L1 -3669 2214 261 7 752 4386 141 40 4 chrX 21983676 21984408 -144665888 + Lx3B LINE L1 6216 6973 0 7 752 335 267 29 10 chrX 21984425 21984527 -144665769 + L1M LINE L1 5320 5423 -701 7 752 453 286 72 27 chrX 21984527 21984750 -144665546 + L1_Rod LINE L1 5511 5743 -104 7 752 15728 51 1 2 chrX 21985286 21988079 -144662217 - L1Md_F3 LINE L1 0 6584 3804 7 752 758 43 35 0 chrX 21988594 21988709 -144661587 + (TCTA)n Simple_repeat Simple_repeat 4 122 0 7 752 26 30 0 0 chrX 21988746 21988779 -144661517 + AT_rich Low_complexity Low_complexity 1 33 0 7 752 24 0 0 0 chrX 21988826 21988850 -144661446 + AT_rich Low_complexity Low_complexity 1 24 0 7 752 213 39 0 0 chrX 21989489 21989515 -144660781 + (T)n Simple_repeat Simple_repeat 1 26 0 7 752 334 302 107 15 chrX 21989851 21990056 -144660240 + L1M3e LINE L1 139 362 -6668 7 752 1170 196 5 9 chrX 21990126 21990348 -144659948 - URR1A DNA MER1_type -1 225 5 7 752 441 254 107 8 chrX 21991309 21991440 -144658856 + B1_Mus2 SINE Alu 3 146 -1 7 752 278 324 130 39 chrX 21991564 21992396 -144657900 + L1MA7 LINE L1 5263 6170 -121 7 752 7094 143 53 9 chrX 21992424 21994721 -144655575 + Lx LINE L1 4216 6639 -15 7 752 1203 48 0 0 chrX 21994721 21994868 -144655428 + B1_Mus1 SINE Alu 2 148 0 7 752 7094 102 8 12 chrX 21994868 21994882 -144655414 + Lx LINE L1 6640 6652 -2 7 752 2802 128 13 18 chrX 21995170 21995624 -144654672 + RLTR11B LTR ERVK 2 453 0 7 752 1065 251 152 5 chrX 21995963 21996331 -144653965 - MER95 LTR ERV 0 431 10 7 752 21 0 0 0 chrX 21996331 21996352 -144653944 + AT_rich Low_complexity Low_complexity 1 21 0 7 752 450 289 144 20 chrX 21996435 21996636 -144653660 - MER2 DNA MER2_type -3 342 117 7 752 321 276 0 62 chrX 21996831 21996843 -144653453 + B4A SINE B4 81 87 -205 7 752 465 195 0 13 chrX 21996843 21996916 -144653380 + PB1D9 SINE Alu 3 74 -46 7 752 3733 120 39 21 chrX 21996916 21997697 -144652599 - RLTR13D1 LTR ERVK 0 806 175 7 752 3359 63 5 5 chrX 21997697 21998150 -144652146 - L1Md_F2 LINE L1 0 6582 6135 7 752 2992 140 22 39 chrX 21998150 21998468 -144651828 - RLTR13D1 LTR ERVK -590 312 2 7 752 283 189 57 0 chrX 21998472 21998525 -144651771 + B1_Mm SINE Alu 72 129 -20 7 752 870 193 279 126 chrX 21998538 21998963 -144651333 + MT2A LTR ERVL 1 493 -40 7 752 549 115 0 0 chrX 21998963 21999050 -144651246 + (TA)n Simple_repeat Simple_repeat 2 88 0 7 752 870 193 279 126 chrX 21999050 21999086 -144651210 + MT2A LTR ERVL 494 533 0 7 752 280 257 14 0 chrX 21999135 21999205 -144651091 - B1_Mus2 SINE Alu -69 78 8 7 752 413 236 107 67 chrX 21999258 21999408 -144650888 + MLT1C LTR MaLR 312 467 0 7 752 708 258 48 7 chrX 21999694 21999954 -144650342 - MTD LTR MaLR -14 405 109 7 752 290 234 13 0 chrX 22000017 22000094 -144650202 + HAL1b LINE L1 1664 1741 -268 1 752 252 158 0 0 chrX 22000276 22000333 -144649963 + T-rich Low_complexity Low_complexity 1 57 0 2 752 429 20 0 0 chrX 22001250 22001300 -144648996 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 752 247 355 17 52 chrX 22001307 22001423 -144648873 - MLT1A LTR MaLR -188 186 75 4 752 285 75 0 0 chrX 22002547 22002587 -144647709 + (A)n Simple_repeat Simple_repeat 1 40 0 5 752 350 318 85 0 chrX 22002807 22002936 -144647360 - B1F SINE Alu 0 149 10 6 752 250 211 27 18 chrX 22003851 22003962 -144646334 + (TA)n Simple_repeat Simple_repeat 1 112 0 7 752 593 303 6 22 chrX 22004252 22004434 -144645862 - Lx8 LINE L1 -253 7220 7042 8 752 239 191 0 16 chrX 22004574 22004593 -144645703 + (CA)n Simple_repeat Simple_repeat 1 19 0 9 752 935 63 8 0 chrX 22004593 22004720 -144645576 + (TCTCCC)n Simple_repeat Simple_repeat 3 130 0 1 752 239 191 0 16 chrX 22004720 22004764 -144645532 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 752 7806 125 36 20 chrX 22006594 22007900 -144642396 - Lx2B LINE L1 -6 6994 5688 1 752 1992 62 6 147 chrX 22007941 22008301 -144641995 + L1_Mus2 LINE L1 6258 6566 0 1 752 245 288 0 0 chrX 22008414 22008487 -144641809 + L1MB5 LINE L1 5844 5916 -258 1 752 373 280 151 24 chrX 22008567 22008779 -144641517 + L1MB5 LINE L1 5919 6157 -17 1 752 207 0 0 0 chrX 22008948 22008971 -144641325 + (TC)n Simple_repeat Simple_repeat 1 23 0 1 752 408 40 0 0 chrX 22008971 22009020 -144641276 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 752 495 0 0 0 chrX 22009020 22009074 -144641222 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 752 1123 139 113 34 chrX 22009202 22009218 -144641078 - Lx3A LINE L1 0 6981 6966 1 752 240 35 0 0 chrX 22009218 22009247 -144641049 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 1 752 1123 139 113 34 chrX 22009247 22009468 -144640828 - Lx3A LINE L1 -16 6965 6725 1 752 4949 102 61 22 chrX 22009447 22010251 -144640045 - Lx3_Mus LINE L1 -479 6530 5696 2 752 450 0 0 0 chrX 22010283 22010333 -144639963 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 752 188 143 24 0 chrX 22010907 22010949 -144639347 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 2 752 679 205 9 0 chrX 22011028 22011171 -144639125 - B1_Mus2 SINE Alu 0 147 4 2 752 426 316 72 0 chrX 22011186 22011325 -144638971 + B3 SINE B2 67 215 -1 2 752 791 69 0 0 chrX 22011541 22011642 -144638654 + U6 snRNA snRNA 7 107 0 2 752 3422 111 16 0 chrX 22011642 22012149 -144638147 + L1_Mus1 LINE L1 4131 4645 -1238 2 752 4532 76 3 5 chrX 22012143 22012755 -144637541 - L1_Mm LINE L1 -614 5269 4659 2 752 1734 133 63 0 chrX 22012728 22013014 -144637282 - Lx4A LINE L1 -396 6662 6359 2 752 1778 174 33 33 chrX 22013014 22013376 -144636920 + Lx4A LINE L1 6694 7055 -3 2 752 25 31 0 0 chrX 22013376 22013408 -144636888 + AT_rich Low_complexity Low_complexity 1 32 0 2 752 8248 101 13 4 chrX 22013408 22015324 -144634972 + L1_Mus1 LINE L1 4631 6567 0 2 752 317 43 0 42 chrX 22016723 22016771 -144633525 + (CATATA)n Simple_repeat Simple_repeat 4 49 0 3 752 285 208 0 0 chrX 22016886 22016958 -144633338 + (CAA)n Simple_repeat Simple_repeat 2 73 0 3 752 1167 124 11 0 chrX 22017578 22017755 -144632541 + B2_Mm1t SINE B2 1 179 -14 3 752 437 81 35 0 chrX 22017783 22017889 -144632407 + B2_Mm2 SINE B2 47 191 -4 3 752 245 267 71 143 chrX 22017901 22018041 -144632255 + B3A SINE B2 59 188 -10 3 11 3739 244 82 14 chrX 22019923 22020901 -144629395 + Lx6 LINE L1 6411 7454 -6 3 753 382 280 114 53 chrX 22021771 22022016 -144628280 + Lx9 LINE L1 6916 7175 -469 3 753 348 252 286 25 chrX 22021989 22022192 -144628104 + Lx8 LINE L1 7216 7471 -2 3 753 415 338 19 34 chrX 22022701 22022909 -144627387 - Lx8 LINE L1 -141 7332 7128 3 753 227 282 198 33 chrX 22023993 22024114 -144626182 - B1F2 SINE Alu -7 142 2 3 753 362 219 139 8 chrX 22024186 22024315 -144625981 - L1MC1 LINE L1 -408 5925 5780 4 753 352 314 9 9 chrX 22024583 22024689 -144625607 - Lx8 LINE L1 -244 7229 7124 4 753 233 275 133 35 chrX 22024907 22025020 -144625276 - B1_Mur4 SINE Alu -9 141 18 4 753 400 345 77 0 chrX 22025064 22025258 -144625038 - ID_B1 SINE B4 -13 211 3 4 753 227 292 57 86 chrX 22025401 22025506 -144624790 + ID_B1 SINE B4 98 199 -25 4 753 262 275 0 12 chrX 22025544 22025625 -144624671 + A-rich Low_complexity Low_complexity 5 84 0 4 753 875 187 11 28 chrX 22025641 22025817 -144624479 + B2_Mm2 SINE B2 1 173 -22 4 753 333 0 0 0 chrX 22025827 22025864 -144624432 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 753 396 0 0 0 chrX 22025864 22025907 -144624389 + (GA)n Simple_repeat Simple_repeat 2 45 0 4 753 1840 205 75 5 chrX 22025997 22026385 -144623911 - MTC LTR MaLR -6 415 1 4 753 22 35 0 0 chrX 22027612 22027641 -144622655 + AT_rich Low_complexity Low_complexity 1 29 0 5 753 483 278 156 0 chrX 22027644 22027824 -144622472 - B3 SINE B2 -8 208 1 5 753 511 302 38 32 chrX 22027856 22028041 -144622255 + B3 SINE B2 21 206 -10 5 753 363 330 17 0 chrX 22028084 22028202 -144622094 + RSINE1 SINE B4 9 128 -37 5 753 676 303 109 56 chrX 22028420 22028964 -144621332 + L1M2 LINE L1 3221 3781 -2362 5 753 378 226 80 54 chrX 22028964 22029069 -144621227 + PB1D9 SINE Alu 1 110 -10 5 753 1069 109 11 6 chrX 22029069 22029245 -144621051 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 5 753 676 303 109 56 chrX 22029251 22029513 -144620783 + L1M2 LINE L1 3782 4070 -2073 5 753 1170 91 42 0 chrX 22029535 22029700 -144620596 - B2_Mm2 SINE B2 -9 186 15 5 753 2809 100 5 10 chrX 22030370 22030775 -144619521 - RLTR9D LTR ERVK 0 403 1 5 753 233 333 0 0 chrX 22031133 22031196 -144619100 - MER5A1 DNA MER1_type -88 78 16 5 753 5375 96 1 8 chrX 22031297 22031347 -144618949 - L1VL1 LINE L1 -3867 2016 1971 6 753 180 0 0 0 chrX 22031347 22031367 -144618929 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 753 6170 94 4 41 chrX 22031367 22032985 -144617311 - L1VL1 LINE L1 -3913 1970 409 6 753 243 79 0 0 chrX 22032996 22033034 -144617262 + (T)n Simple_repeat Simple_repeat 1 38 0 6 753 5411 139 25 22 chrX 22033034 22033424 -144616872 - L1_Mur1 LINE L1 -433 5453 5061 6 753 360 0 0 0 chrX 22033424 22033464 -144616832 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 753 5411 139 25 22 chrX 22033464 22034058 -144616238 - L1_Mur1 LINE L1 -826 5060 4466 6 753 1985 111 18 12 chrX 22034056 22034393 -144615903 - L1_Mur1 LINE L1 -2514 3372 3034 6 753 774 132 40 27 chrX 22034397 22034545 -144615751 + MT2_Mm LTR ERVL 323 472 -21 6 753 6460 154 6 8 chrX 22034545 22035711 -144614585 - L1_Mur1 LINE L1 -3341 2545 1382 6 753 272 234 152 34 chrX 22035761 22035938 -144614358 - Charlie1b DNA MER1_type -72 451 254 6 753 425 353 83 19 chrX 22035955 22036160 -144614136 + B4A SINE B4 1 218 -74 6 753 243 61 0 0 chrX 22036206 22036239 -144614057 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 753 247 239 0 0 chrX 22036239 22036285 -144614011 + polypurine Low_complexity Low_complexity 3 48 0 6 753 364 318 45 39 chrX 22036287 22036441 -144613855 - Charlie1b DNA MER1_type -282 241 87 6 753 282 295 154 98 chrX 22036513 22036727 -144613569 - B4A SINE B4 -56 236 11 7 753 185 213 21 21 chrX 22037564 22037612 -144612684 + L2 LINE L2 2800 2847 -572 7 753 302 88 0 109 chrX 22037821 22037912 -144612384 - L1Md_F3 LINE L1 0 6584 6514 7 753 336 115 0 0 chrX 22038410 22038462 -144611834 - ORR1B1 LTR MaLR -54 340 289 7 753 189 0 0 0 chrX 22038558 22038579 -144611717 + (TG)n Simple_repeat Simple_repeat 2 22 0 7 753 571 82 0 10 chrX 22038591 22038690 -144611606 - Lx LINE L1 -3 6651 6554 7 753 21 0 0 0 chrX 22039757 22039778 -144610518 + AT_rich Low_complexity Low_complexity 1 21 0 7 753 29 28 0 0 chrX 22041012 22041048 -144609248 + AT_rich Low_complexity Low_complexity 1 36 0 7 753 225 0 0 0 chrX 22041235 22041260 -144609036 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 753 2892 40 0 0 chrX 22041269 22041620 -144608676 - L1Md_T LINE L1 0 6582 6232 7 753 596 278 122 6 chrX 22042481 22042662 -144607634 - B3 SINE B2 -8 208 7 8 753 388 264 177 14 chrX 22043026 22043195 -144607101 + L1_Rod LINE L1 5569 5803 -494 8 753 354 224 0 0 chrX 22043703 22043779 -144606517 + L1MA5 LINE L1 6200 6275 -25 8 753 22 0 0 0 chrX 22043787 22043809 -144606487 + AT_rich Low_complexity Low_complexity 1 22 0 8 753 334 352 119 8 chrX 22044308 22044434 -144605862 + RSINE1 SINE B4 2 141 -24 8 753 245 239 30 0 chrX 22045157 22045224 -144605072 + Lx9 LINE L1 6958 7026 -618 8 753 1010 187 104 117 chrX 22045754 22046014 -144604282 - Lx7 LINE L1 0 7696 7403 8 753 252 0 0 0 chrX 22046014 22046042 -144604254 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 8 753 1010 187 104 117 chrX 22046042 22046106 -144604190 - Lx7 LINE L1 -294 7402 7354 8 753 1815 141 161 184 chrX 22046106 22046812 -144603484 + RMER6C LTR ERVK 1 690 0 8 753 1010 187 104 117 chrX 22046812 22046898 -144603398 - Lx7 LINE L1 -343 7353 7291 8 753 989 231 19 68 chrX 22046898 22047163 -144603133 - RLTR19B LTR ERVK 0 715 464 8 753 352 240 109 43 chrX 22047139 22047317 -144602979 + RMER16 LTR ERVK 214 365 -168 9 753 718 223 71 59 chrX 22047335 22047573 -144602723 + RMER16 LTR ERVK 286 526 -7 9 753 250 245 6 206 chrX 22047605 22047780 -144602516 + RMER16-int LTR ERVK 5 144 -5262 9 753 6583 165 88 25 chrX 22047788 22048338 -144601958 + RMER16-int LTR ERVK 71 669 -4737 9 753 222 37 0 0 chrX 22048338 22048365 -144601931 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 753 6583 165 88 25 chrX 22048365 22049113 -144601183 + RMER16-int LTR ERVK 670 1449 -3957 9 753 449 150 19 39 chrX 22049112 22049216 -144601080 + RMER16-int LTR ERVK 3542 3643 -1763 9 753 365 107 0 0 chrX 22049228 22049284 -144601012 + B2_Mm2 SINE B2 1 56 -139 9 753 5211 88 31 45 chrX 22049290 22049695 -144600601 + L1_Mur3 LINE L1 1466 1867 -2047 9 753 1249 91 40 0 chrX 22049695 22049871 -144600425 + B2_Mm2 SINE B2 3 185 -10 9 753 5211 146 72 38 chrX 22049871 22050695 -144599601 + L1_Mur3 LINE L1 1868 2809 -3071 9 753 996 191 68 82 chrX 22051028 22051308 -144598988 + RMER16-int LTR ERVK 4352 4627 -895 9 753 501 348 147 8 chrX 22051696 22051948 -144598348 + MLT1D LTR MaLR 219 505 0 9 753 1633 174 133 26 chrX 22054523 22054870 -144595426 + MTC LTR MaLR 1 384 -37 9 753 186 71 0 0 chrX 22054870 22054898 -144595398 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 9 753 541 167 219 0 chrX 22054900 22055014 -144595282 + B1_Mus2 SINE Alu 9 147 0 9 753 436 45 45 0 chrX 22055016 22055082 -144595214 + (GAAA)n Simple_repeat Simple_repeat 2 70 0 1 753 598 219 8 0 chrX 22055440 22055559 -144594737 + MTC LTR MaLR 1 120 -301 1 753 7472 70 0 33 chrX 22055571 22056331 -144593965 - L1Md_F2 LINE L1 -3 6579 5853 1 753 2721 115 50 7 chrX 22056331 22056786 -144593510 - IAPLTR2_Mm LTR ERVK 0 475 1 1 753 28538 91 68 8 chrX 22056786 22061898 -144588398 - L1Md_F2 LINE L1 -31 5852 426 1 753 395 301 113 49 chrX 22061898 22062083 -144588213 + MTC LTR MaLR 92 288 -133 1 753 576 189 0 29 chrX 22062083 22062219 -144588077 - Lx3C LINE L1 -712 6264 6133 1 753 1287 327 101 25 chrX 22062360 22063131 -144587165 + Lx8 LINE L1 6636 7465 -8 1 753 1876 170 225 2 chrX 22063426 22063879 -144586417 - L1VL2 LINE L1 -5697 638 85 1 753 337 261 92 32 chrX 22063882 22064100 -144586196 + L1MA5 LINE L1 6065 6295 -5 1 753 243 263 17 0 chrX 22064121 22064209 -144586087 + L1MA4 LINE L1 6188 6277 -23 1 753 313 234 97 45 chrX 22065249 22065383 -144584913 - MIR SINE MIR 0 262 122 1 753 805 287 36 12 chrX 22065811 22066061 -144584235 - Lx6 LINE L1 -26 7434 7179 1 753 414 0 0 0 chrX 22066116 22066162 -144584134 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 753 306 0 0 0 chrX 22066162 22066195 -144584101 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 753 440 317 57 14 chrX 22066332 22066473 -144583823 - RSINE1 SINE B4 -13 152 6 1 753 234 0 0 0 chrX 22067354 22067380 -144582916 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 753 468 86 0 0 chrX 22067382 22067452 -144582844 + (CA)n Simple_repeat Simple_repeat 1 70 0 1 753 228 232 0 18 chrX 22067453 22067510 -144582786 + GA-rich Low_complexity Low_complexity 3 58 0 1 753 1637 32 23 5 chrX 22068139 22068359 -144581937 + L1Md_F3 LINE L1 6296 6519 -65 1 753 302 232 0 14 chrX 22068576 22068646 -144581650 + RMER15-int LTR ERVL 4892 4960 -39 1 753 355 106 30 0 chrX 22069240 22069306 -144580990 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 753 264 240 132 13 chrX 22069909 22069985 -144580311 + MLT1A1 LTR MaLR 305 389 -19 1 753 624 325 3 20 chrX 22070070 22070286 -144580010 - B3A SINE B2 -6 210 1 1 753 1205 178 188 39 chrX 22071321 22071678 -144578618 - RMER17C LTR ERVK 0 410 1 1 753 451 118 287 11 chrX 22072048 22072150 -144578146 - BGLII LTR ERVK -305 136 1 1 753 495 270 45 26 chrX 22073132 22073322 -144576974 + MER33 DNA MER1_type 1 179 -145 1 753 582 15 0 0 chrX 22074882 22074949 -144575347 + (GGAA)n Simple_repeat Simple_repeat 2 68 0 1 753 250 385 31 10 chrX 22074965 22075062 -144575234 + RSINE1 SINE B4 3 101 -64 1 753 25 0 0 0 chrX 22075102 22075127 -144575169 + AT_rich Low_complexity Low_complexity 1 25 0 1 753 400 222 30 0 chrX 22075277 22075376 -144574920 + Lx7 LINE L1 7205 7306 -390 1 753 22 35 0 0 chrX 22075671 22075700 -144574596 + AT_rich Low_complexity Low_complexity 1 29 0 1 753 248 203 13 26 chrX 22075717 22075793 -144574503 + (TATG)n Simple_repeat Simple_repeat 2 76 0 1 753 1496 209 35 92 chrX 22075868 22076269 -144574027 - RLTR1B LTR ERV1 0 512 135 1 753 32 81 0 0 chrX 22076379 22076453 -144573843 + AT_rich Low_complexity Low_complexity 1 74 0 1 753 225 154 0 0 chrX 22076602 22076641 -144573655 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 753 225 241 35 0 chrX 22077237 22077324 -144572972 - L1M3 LINE L1 -1438 4702 4613 1 753 229 273 39 8 chrX 22077335 22077464 -144572832 - Lx8 LINE L1 -6 7467 7335 1 753 39538 8 0 1 chrX 22077446 22084438 -144565858 - L1Md_A LINE L1 0 6582 1 1 753 232 240 89 50 chrX 22084622 22084723 -144565573 + L1M2 LINE L1 2138 2242 -3898 1 753 315 0 0 0 chrX 22085018 22085053 -144565243 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 753 498 300 59 11 chrX 22085157 22085443 -144564853 + L1M2 LINE L1 3620 3919 -2224 1 753 878 216 93 62 chrX 22085484 22085780 -144564516 + Lx7 LINE L1 7291 7595 -101 1 753 1199 121 21 10 chrX 22085780 22085972 -144564324 + B2_Mm2 SINE B2 1 194 -1 1 753 878 216 93 62 chrX 22085972 22086061 -144564235 + Lx7 LINE L1 7596 7688 -8 1 753 976 146 0 45 chrX 22086148 22086296 -144564000 + B2_Mm2 SINE B2 15 161 -34 1 753 228 67 0 0 chrX 22086296 22086326 -144563970 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 753 976 146 0 45 chrX 22086326 22086356 -144563940 + B2_Mm2 SINE B2 162 185 -10 1 753 237 295 53 18 chrX 22086356 22086470 -144563826 + L1M2 LINE L1 4051 4168 -1972 1 753 272 236 126 9 chrX 22086487 22086598 -144563698 + L1MA5 LINE L1 5845 5968 -332 1 753 243 0 0 0 chrX 22086880 22086907 -144563389 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 753 396 0 0 0 chrX 22086907 22086950 -144563346 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 753 3744 144 6 35 chrX 22087085 22087781 -144562515 - L1_Mur2 LINE L1 -818 5059 4384 1 753 3563 169 37 37 chrX 22087780 22088528 -144561768 + Lx5 LINE L1 5590 6337 -713 1 753 788 161 0 7 chrX 22088551 22088701 -144561595 + L1_Mur2 LINE L1 4384 4532 -1345 1 753 2045 225 38 13 chrX 22088692 22089283 -144561013 + Lx5 LINE L1 6339 7050 -8 1 753 23 0 0 0 chrX 22089338 22089361 -144560935 + AT_rich Low_complexity Low_complexity 1 23 0 1 753 223 146 36 0 chrX 22089746 22089801 -144560495 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 753 195 42 0 0 chrX 22089878 22089902 -144560394 + (T)n Simple_repeat Simple_repeat 1 24 0 1 753 39562 4 0 0 chrX 22089941 22096308 -144553988 - L1Md_A LINE L1 0 6582 214 1 753 207 208 18 54 chrX 22096679 22096735 -144553561 - MER5A DNA MER1_type 0 189 136 1 753 368 274 100 25 chrX 22096777 22096897 -144553399 - B1F SINE Alu -3 146 18 1 753 226 160 0 107 chrX 22096943 22096999 -144553297 + Tigger1 DNA MER2_type 1573 1622 -796 1 753 422 200 62 0 chrX 22097044 22097124 -144553172 + B3 SINE B2 129 213 -3 1 753 387 330 50 28 chrX 22097254 22097435 -144552861 + L1MC3 LINE L1 7282 7466 -319 1 753 329 287 81 40 chrX 22097529 22097678 -144552618 + L1MC3 LINE L1 7629 7783 -2 1 753 3007 231 75 19 chrX 22098847 22099145 -144551151 + Lx6 LINE L1 6446 6745 -715 1 753 819 186 149 0 chrX 22099145 22099339 -144550957 + URR1B DNA MER1_type 3 225 0 1 753 3007 231 75 19 chrX 22099339 22099841 -144550455 + Lx6 LINE L1 6746 7291 -169 1 753 305 287 23 0 chrX 22099926 22100013 -144550283 + Lx7 LINE L1 7208 7296 -400 1 753 522 286 60 0 chrX 22100149 22100282 -144550014 - B3A SINE B2 -49 149 9 1 753 22 0 0 0 chrX 22100598 22100620 -144549676 + AT_rich Low_complexity Low_complexity 1 22 0 1 753 7517 65 1 2 chrX 22100620 22102198 -144548098 - L1_Mus1 LINE L1 -2 6565 4991 1 753 755 303 9 32 chrX 22102734 22102952 -144547344 - B3 SINE B2 -2 214 2 1 753 208 121 0 0 chrX 22103001 22103034 -144547262 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 753 414 157 0 0 chrX 22103035 22103118 -144547178 + (TATATG)n Simple_repeat Simple_repeat 3 85 0 1 753 1225 90 6 0 chrX 22103281 22103448 -144546848 + B2_Mm2 SINE B2 1 168 -27 1 753 342 0 0 0 chrX 22103450 22103488 -144546808 + (GA)n Simple_repeat Simple_repeat 1 38 0 1 753 313 322 128 41 chrX 22103622 22103865 -144546431 - L1MC2 LINE L1 -238 6106 5843 1 753 353 355 22 0 chrX 22103980 22104118 -144546178 - L1MD1 LINE L1 -105 6137 5997 1 753 2729 64 6 0 chrX 22104136 22104480 -144545816 + ORR1A1 LTR MaLR 1 346 0 1 753 375 302 97 36 chrX 22104486 22104651 -144545645 - L1ME1 LINE L1 -226 5953 5779 1 753 1433 203 65 3 chrX 22104822 22105143 -144545153 - Lx3C LINE L1 -3 6973 6633 1 753 36183 30 0 0 chrX 22105150 22111591 -144538705 - L1Md_T LINE L1 0 6585 48 1 753 3270 194 15 6 chrX 22111592 22112275 -144538021 - Lx3C LINE L1 -329 6647 5959 1 753 3867 62 8 0 chrX 22112273 22112792 -144537504 + L1Md_F2 LINE L1 5064 5586 -297 1 753 8008 53 1 5 chrX 22112793 22113788 -144536508 + L1Md_F2 LINE L1 5588 6578 -4 1 753 562 250 51 27 chrX 22113789 22114060 -144536236 + Lx9 LINE L1 5703 6016 -1628 1 753 316 282 8 24 chrX 22114265 22114392 -144535904 + Lx9 LINE L1 7135 7259 -385 1 753 649 286 36 42 chrX 22115905 22116263 -144534033 - L1MA6 LINE L1 -17 6283 5928 1 753 735 224 0 0 chrX 22116344 22116518 -144533778 + (TA)n Simple_repeat Simple_repeat 1 174 0 1 753 258 348 0 0 chrX 22117300 22117369 -144532927 - MER31B LTR ERV1 -338 128 60 1 753 12131 56 5 4 chrX 22117572 22119934 -144530362 - L1Md_F2 LINE L1 -4 6578 4215 1 753 582 287 93 36 chrX 22120408 22120773 -144529523 - L1_Rod LINE L1 -31 5816 5431 1 753 871 60 0 33 chrX 22120984 22121104 -144529192 + B1_Mus2 SINE Alu 32 147 0 1 753 459 0 0 0 chrX 22121104 22121155 -144529141 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 753 530 188 26 26 chrX 22121293 22121408 -144528888 + RMER17B LTR ERVK 225 339 -619 1 753 2688 248 68 69 chrX 22121772 22122699 -144527597 + RMER17B LTR ERVK 1 926 -32 1 753 3030 281 82 130 chrX 22122681 22122960 -144527336 + Tigger1 DNA MER2_type 105 387 -2031 1 753 1741 197 24 32 chrX 22122960 22123337 -144526959 + ORR1D1 LTR MaLR 1 374 0 1 753 3030 281 82 130 chrX 22123337 22124636 -144525660 + Tigger1 DNA MER2_type 388 1610 -808 1 753 706 275 20 15 chrX 22124636 22124839 -144525457 + B3 SINE B2 2 205 -11 1 753 3030 281 82 130 chrX 22124839 22125065 -144525231 + Tigger1 DNA MER2_type 1611 1823 -595 1 753 328 333 87 58 chrX 22125076 22125318 -144524978 + Tigger1 DNA MER2_type 1914 2162 -256 1 753 818 252 99 43 chrX 22125473 22125796 -144524500 + Tigger1 DNA MER2_type 2078 2418 0 1 753 275 202 13 0 chrX 22127966 22128045 -144522251 + GA-rich Low_complexity Low_complexity 1 80 0 1 753 595 294 142 7 chrX 22128060 22128348 -144521948 + Lx9 LINE L1 7147 7473 -171 1 753 249 220 0 91 chrX 22128431 22128486 -144521810 + B1_Mur2 SINE Alu 93 142 -7 1 753 266 341 30 44 chrX 22128611 22128746 -144521550 - MER34A LTR ERV1 -438 133 1 1 753 193 385 26 0 chrX 22129280 22129358 -144520938 - L3 LINE CR1 -54 4435 4356 1 753 227 355 34 55 chrX 22129380 22129526 -144520770 - L3 LINE CR1 -193 4296 4154 1 753 256 345 119 17 chrX 22129926 22130044 -144520252 + MER92B LTR ERV1 216 345 -291 1 753 419 244 0 34 chrX 22130069 22130188 -144520108 - RMER1C Other Other -9 1333 1219 1 753 2585 272 96 91 chrX 22130198 22131381 -144518915 + Lx5 LINE L1 5844 7032 -18 1 753 357 92 46 0 chrX 22131393 22131458 -144518838 - L1Md_F3 LINE L1 -7 6577 6510 1 753 653 138 48 16 chrX 22131468 22131593 -144518703 - RMER1C Other Other -122 1220 1092 1 753 333 280 75 17 chrX 22131655 22131775 -144518521 + MER92B LTR ERV1 361 487 -149 1 753 181 320 87 29 chrX 22132389 22132492 -144517804 - L3 LINE CR1 -869 3620 3512 1 753 210 37 0 0 chrX 22132676 22132703 -144517593 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 753 774 193 7 0 chrX 22132704 22132839 -144517457 - B1_Mus1 SINE Alu -12 136 1 2 753 237 221 52 0 chrX 22133079 22133156 -144517140 - Lx5 LINE L1 -5 7045 6965 2 753 345 275 108 15 chrX 22133280 22133483 -144516813 + L1MA6 LINE L1 6047 6268 -32 2 753 438 299 43 29 chrX 22133500 22133638 -144516658 + B1F1 SINE Alu 10 149 0 2 753 398 241 174 43 chrX 22133693 22133992 -144516304 + Lx7 LINE L1 7359 7696 0 2 753 238 26 51 0 chrX 22134280 22134319 -144515977 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2 753 648 70 0 0 chrX 22134374 22134460 -144515836 + (TC)n Simple_repeat Simple_repeat 1 86 0 2 753 357 109 0 0 chrX 22134646 22134701 -144515595 + (GGGGA)n Simple_repeat Simple_repeat 1 55 0 2 753 365 321 15 83 chrX 22134810 22135014 -144515282 + Lx8 LINE L1 7079 7268 -205 2 753 313 94 15 15 chrX 22135166 22135231 -144515065 - MusHAL1 LINE L1 -12 2700 2636 2 753 216 0 0 0 chrX 22135482 22135506 -144514790 + (T)n Simple_repeat Simple_repeat 1 24 0 2 753 927 276 28 9 chrX 22135506 22135828 -144514468 - L1M2 LINE L1 -1162 4981 4654 2 753 417 56 69 0 chrX 22135957 22136029 -144514267 - L1Md_F3 LINE L1 0 6584 6508 2 753 228 307 157 42 chrX 22136094 22136162 -144514134 - L1M2 LINE L1 -1612 4531 4461 2 753 392 0 67 0 chrX 22136162 22136222 -144514074 - L1Md_F3 LINE L1 -1 6583 6520 2 753 228 307 157 42 chrX 22136222 22136334 -144513962 - L1M2 LINE L1 -1683 4460 4350 2 753 504 0 0 0 chrX 22136334 22136390 -144513906 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 753 285 300 99 26 chrX 22136390 22136616 -144513680 - L1M2 LINE L1 -1794 4349 4074 2 753 196 196 16 97 chrX 22137613 22137675 -144512621 + L3 LINE CR1 928 984 -3505 2 753 315 328 55 16 chrX 22138757 22138940 -144511356 - L1MC LINE L1 -2129 5753 5564 2 753 22 35 0 0 chrX 22139146 22139175 -144511121 + AT_rich Low_complexity Low_complexity 1 29 0 2 753 181 250 42 0 chrX 22139520 22139568 -144510728 - MIR SINE MIR -131 131 82 2 753 3586 132 83 8 chrX 22139623 22140227 -144510069 - Lx2B LINE L1 -3 6997 6349 2 753 426 308 0 17 chrX 22140240 22140359 -144509937 + PB1D7 SINE Alu 4 120 0 2 753 435 329 31 0 chrX 22140414 22140575 -144509721 + MIR SINE MIR 72 237 -25 2 753 2180 92 21 48 chrX 22141059 22141436 -144508860 - IAPLTR1_Mm LTR ERVK 0 367 1 2 753 52459 30 11 2 chrX 22141440 22147854 -144502442 - IAPEz-int LTR ERVK -3 6478 8 2 753 2180 92 21 48 chrX 22147854 22148231 -144502065 - IAPLTR1_Mm LTR ERVK 0 367 1 2 753 22 0 0 0 chrX 22148909 22148931 -144501365 + AT_rich Low_complexity Low_complexity 1 22 0 2 753 331 283 84 38 chrX 22149143 22149404 -144500892 + L1MEd LINE L1 933 1205 -4914 2 753 304 286 73 22 chrX 22149416 22149552 -144500744 + L1MEd LINE L1 1258 1400 -4825 2 753 1184 62 0 0 chrX 22149773 22149918 -144500378 + B1_Mus2 SINE Alu 1 145 -2 2 753 558 0 0 0 chrX 22149918 22149980 -144500316 + (GA)n Simple_repeat Simple_repeat 2 63 0 2 753 283 258 0 0 chrX 22150437 22150503 -144499793 + B3 SINE B2 1 66 -150 2 753 336 137 176 14 chrX 22150685 22150759 -144499537 - RLTR11A2 LTR ERVK 0 527 442 2 753 264 30 0 0 chrX 22150759 22150792 -144499504 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2 94 36458 42 1 3 chrX 22150803 22157231 -144493065 - L1Md_T LINE L1 0 6585 72 2 754 2014 214 11 56 chrX 22157231 22157697 -144492599 - RLTR11A2 LTR ERVK -82 445 1 2 754 351 0 0 0 chrX 22157736 22157775 -144492521 + (T)n Simple_repeat Simple_repeat 1 39 0 2 754 817 292 165 49 chrX 22157938 22158201 -144492095 - Lx8 LINE L1 -380 7093 6787 2 754 2372 152 78 60 chrX 22158201 22158752 -144491544 + RLTR31_Mm LTR ERVK 1 561 0 2 754 817 292 165 49 chrX 22158752 22158807 -144491489 - Lx8 LINE L1 -687 6786 6742 2 754 2332 58 10 7 chrX 22158807 22159117 -144491179 + L1Md_F3 LINE L1 6274 6584 0 2 754 817 243 194 32 chrX 22159117 22159411 -144490885 - Lx8 LINE L1 -732 6741 6395 2 754 1393 304 48 19 chrX 22159405 22160109 -144490187 + Lx8 LINE L1 5060 5784 -63 2 754 649 351 43 16 chrX 22160638 22161269 -144489027 - MMERGLN-int LTR ERV1 -3429 4172 3572 2 754 881 115 15 0 chrX 22161720 22161850 -144488446 - RLTR23 LTR ERV1 -298 132 1 2 754 458 304 80 10 chrX 22161879 22162158 -144488138 + Lx8 LINE L1 6640 7016 -457 2 754 1512 191 51 35 chrX 22162164 22162504 -144487792 + ORR1C2 LTR MaLR 6 384 0 2 754 302 343 114 14 chrX 22162523 22162733 -144487563 + Lx8 LINE L1 7058 7288 -185 2 754 311 333 0 23 chrX 22162958 22163090 -144487206 + Lx8 LINE L1 6258 6386 -1087 2 754 200 307 32 127 chrX 22163134 22163354 -144486942 + L2c LINE L2 3183 3381 -6 2 754 733 197 7 34 chrX 22163917 22164064 -144486232 - B1_Mur3 SINE Alu 0 149 7 2 754 355 298 7 82 chrX 22163967 22164102 -144486194 - MT2B LTR ERVL -344 257 133 2 754 334 238 121 36 chrX 22164105 22164271 -144486025 - L1M4b LINE L1 -3743 3591 3412 2 754 23 0 0 0 chrX 22164285 22164308 -144485988 + AT_rich Low_complexity Low_complexity 1 23 0 2 754 648 248 0 134 chrX 22164441 22164613 -144485683 + B1_Mur4 SINE Alu 1 149 -1 2 754 21 0 0 0 chrX 22165078 22165099 -144485197 + AT_rich Low_complexity Low_complexity 1 21 0 2 754 401 18 54 0 chrX 22165386 22165442 -144484854 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 2 754 859 171 57 6 chrX 22165856 22166033 -144484263 + B2_Mm2 SINE B2 2 187 -8 2 754 21 0 0 0 chrX 22166121 22166142 -144484154 + AT_rich Low_complexity Low_complexity 1 21 0 2 754 22 0 0 0 chrX 22166179 22166201 -144484095 + AT_rich Low_complexity Low_complexity 1 22 0 2 754 677 280 30 0 chrX 22166223 22166423 -144483873 - Lx7 LINE L1 -344 7352 7147 2 754 438 183 51 38 chrX 22166484 22166640 -144483656 + Lx6 LINE L1 7322 7456 -4 2 754 565 196 93 0 chrX 22167713 22167820 -144482476 - B3A SINE B2 -81 117 1 2 754 315 289 19 0 chrX 22167853 22167957 -144482339 - L1MA4 LINE L1 -364 5936 5831 2 754 264 264 26 52 chrX 22168360 22168476 -144481820 - L1MA5 LINE L1 0 6300 6188 2 754 752 281 27 58 chrX 22168487 22168744 -144481552 + Lx8 LINE L1 7070 7318 -155 2 754 582 60 0 0 chrX 22168757 22168840 -144481456 + (GTTTG)n Simple_repeat Simple_repeat 2 84 0 2 754 21 36 0 0 chrX 22169002 22169030 -144481266 + AT_rich Low_complexity Low_complexity 1 28 0 2 754 723 221 0 14 chrX 22169108 22169250 -144481046 + B1_Mur3 SINE Alu 3 142 -7 2 754 25 31 0 0 chrX 22169474 22169506 -144480790 + AT_rich Low_complexity Low_complexity 1 32 0 2 754 197 290 0 88 chrX 22170308 22170410 -144479886 - L2c LINE L2 -1 3386 3294 2 754 580 284 125 54 chrX 22170423 22170783 -144479513 - MLT1B LTR MaLR -3 408 14 2 754 21 36 0 0 chrX 22170874 22170902 -144479394 + AT_rich Low_complexity Low_complexity 1 28 0 2 754 745 266 37 50 chrX 22170971 22171189 -144479107 + B3 SINE B2 2 216 0 2 754 829 276 53 36 chrX 22171365 22171693 -144478603 + Lx7 LINE L1 5550 5914 -1782 2 754 564 337 81 37 chrX 22172261 22172745 -144477551 + Lx7 LINE L1 6931 7435 -38 2 754 32 26 0 0 chrX 22172754 22172793 -144477503 + AT_rich Low_complexity Low_complexity 1 39 0 2 754 351 283 28 28 chrX 22172805 22172914 -144477382 + PB1D10 SINE Alu 3 111 -6 2 754 291 71 0 0 chrX 22172990 22173032 -144477264 + (CAAT)n Simple_repeat Simple_repeat 2 43 0 2 754 222 293 72 60 chrX 22173059 22173226 -144477070 - MIR SINE MIR -49 213 45 2 754 1286 203 86 36 chrX 22173730 22174031 -144476265 - ORR1A4 LTR MaLR -8 321 6 2 754 400 268 78 26 chrX 22174311 22174426 -144475870 + B4A SINE B4 168 288 -4 2 754 238 253 160 0 chrX 22174677 22174752 -144475544 + B4A SINE B4 2 88 -204 2 754 314 206 0 16 chrX 22174771 22174835 -144475461 + B4 SINE B4 144 206 -86 2 754 1036 103 7 0 chrX 22174899 22175037 -144475259 + B1_Mus1 SINE Alu 1 139 -9 2 754 243 0 0 0 chrX 22175037 22175064 -144475232 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 754 184 104 0 59 chrX 22175081 22175132 -144475164 + A-rich Low_complexity Low_complexity 2 49 0 2 754 251 315 44 26 chrX 22175144 22175258 -144475038 + PB1D10 SINE Alu 1 116 -1 2 754 209 237 62 78 chrX 22175399 22175463 -144474833 + MIRb SINE MIR 133 195 -73 2 754 558 308 10 44 chrX 22175964 22176168 -144474128 + B3A SINE B2 2 198 0 2 754 839 155 21 7 chrX 22176189 22176332 -144473964 + B1_Mus1 SINE Alu 2 146 -2 2 754 234 128 0 0 chrX 22176697 22176736 -144473560 + (A)n Simple_repeat Simple_repeat 1 39 0 2 754 333 0 0 0 chrX 22177007 22177044 -144473252 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 2 754 303 93 36 18 chrX 22177468 22177523 -144472773 - RLTR10D LTR ERVK 0 359 304 2 754 451 108 10 0 chrX 22177526 22177598 -144472698 + L1Md_F2 LINE L1 5533 5615 -697 2 754 8090 52 3 0 chrX 22177598 22178589 -144471707 + L1Md_F2 LINE L1 5587 6580 -2 2 754 833 27 9 9 chrX 22178617 22178728 -144471568 + B1_Mus1 SINE Alu 38 148 0 2 754 364 284 0 12 chrX 22178833 22178915 -144471381 + B3A SINE B2 6 86 -112 2 754 264 310 18 77 chrX 22179220 22179388 -144470908 + B3 SINE B2 58 215 -1 2 754 777 344 21 28 chrX 22179509 22179945 -144470351 + Lx8 LINE L1 6894 7326 -147 2 754 200 233 17 0 chrX 22180699 22180759 -144469537 + A-rich Low_complexity Low_complexity 5 65 0 2 754 563 265 78 13 chrX 22181026 22181179 -144469117 + B3 SINE B2 51 213 -3 2 754 21 71 0 0 chrX 22181435 22181477 -144468819 + AT_rich Low_complexity Low_complexity 1 42 0 2 754 2661 31 28 0 chrX 22181770 22182088 -144468208 + IAPLTR2b LTR ERVK 1 327 0 2 754 3719 175 85 83 chrX 22182104 22182527 -144467769 + RMER19B LTR ERVK 1 434 -468 2 754 5481 43 3 3 chrX 22182527 22183210 -144467086 - L1Md_F3 LINE L1 0 6584 5902 2 754 3719 175 85 83 chrX 22183210 22183656 -144466640 + RMER19B LTR ERVK 435 872 -30 2 754 1191 48 0 0 chrX 22183656 22183803 -144466493 + B1_Mm SINE Alu 1 147 0 2 754 2377 164 27 5 chrX 22184108 22184519 -144465777 - MTC LTR MaLR -1 420 1 2 754 671 365 27 50 chrX 22184571 22184833 -144465463 + B4A SINE B4 8 263 -29 2 754 205 29 59 0 chrX 22184981 22185015 -144465281 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 2 754 257 392 8 16 chrX 22185051 22185233 -144465063 - MIR SINE MIR -48 220 35 2 754 251 347 10 10 chrX 22185557 22185653 -144464643 + L2c LINE L2 3068 3163 -224 2 754 221 286 0 0 chrX 22185830 22185893 -144464403 + GA-rich Low_complexity Low_complexity 2 64 0 3 754 194 286 0 0 chrX 22186031 22186080 -144464216 - MIRm SINE MIR -8 268 220 3 754 217 240 0 0 chrX 22186090 22186140 -144464156 + (TATATG)n Simple_repeat Simple_repeat 6 55 0 3 754 667 293 185 39 chrX 22186559 22187101 -144463195 - L1MD3 LINE L1 -62 7933 7228 3 754 428 284 80 22 chrX 22187114 22187251 -144463045 - B1F SINE Alu -2 147 3 3 754 340 349 38 15 chrX 22187271 22187402 -144462894 - B1F1 SINE Alu -13 136 3 3 754 740 42 0 10 chrX 22187516 22187613 -144462683 + (TTTA)n Simple_repeat Simple_repeat 3 98 0 3 754 701 262 25 10 chrX 22187613 22187810 -144462486 - B3 SINE B2 -16 200 1 3 754 183 42 0 0 chrX 22188088 22188112 -144462184 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 754 508 329 43 64 chrX 22188143 22188418 -144461878 + B4A SINE B4 2 292 0 3 754 405 0 0 0 chrX 22189135 22189180 -144461116 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 754 597 14 0 0 chrX 22189180 22189249 -144461047 + (TG)n Simple_repeat Simple_repeat 1 70 0 3 754 441 0 0 0 chrX 22189249 22189297 -144460999 + (GA)n Simple_repeat Simple_repeat 1 49 0 3 754 180 0 0 0 chrX 22189769 22189789 -144460507 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 754 345 158 0 0 chrX 22190367 22190449 -144459847 + (TCTG)n Simple_repeat Simple_repeat 3 84 0 3 754 464 318 58 6 chrX 22190635 22190809 -144459487 + MER5A DNA MER1_type 1 183 -6 3 754 530 289 126 33 chrX 22190850 22191065 -144459231 - MER2 DNA MER2_type -6 339 105 3 754 441 36 0 0 chrX 22191067 22191122 -144459174 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 754 1096 76 0 27 chrX 22191125 22191273 -144459023 - B1_Mus1 SINE Alu 0 148 5 3 754 5352 84 3 3 chrX 22191293 22192026 -144458270 + L1_Mus1 LINE L1 5556 6258 -309 3 754 827 271 28 24 chrX 22192026 22192279 -144458017 + ORR1D2 LTR MaLR 115 368 -2 3 754 431 293 141 13 chrX 22192280 22192459 -144457837 + B3A SINE B2 1 202 -14 3 754 440 269 9 37 chrX 22194358 22194466 -144455830 + PB1D10 SINE Alu 13 117 0 3 754 828 332 105 58 chrX 22196229 22197250 -144453046 + Lx8 LINE L1 5651 6719 -754 3 754 225 77 37 37 chrX 22197264 22197318 -144452978 + T-rich Low_complexity Low_complexity 3 56 0 3 754 1632 290 15 2 chrX 22197364 22197765 -144452531 + MTD LTR MaLR 12 417 -2 3 754 949 291 145 9 chrX 22197767 22198214 -144452082 + Lx8 LINE L1 6715 7222 -251 3 754 469 264 67 40 chrX 22198374 22198524 -144451772 + B3 SINE B2 58 211 -5 3 754 1209 271 107 12 chrX 22200178 22200600 -144449696 + Lx8 LINE L1 6999 7460 -13 3 754 1148 71 58 0 chrX 22200742 22200897 -144449399 - B2_Mm2 SINE B2 -30 165 2 3 754 346 277 36 0 chrX 22201243 22201326 -144448970 + B4A SINE B4 1 86 -206 3 754 705 194 14 36 chrX 22201372 22201511 -144448785 + B1_Mur2 SINE Alu 13 148 -1 3 754 2774 91 20 129 chrX 22201513 22202054 -144448242 - RLTR45 LTR ERVK 0 482 1 3 754 412 339 29 41 chrX 22202073 22202245 -144448051 + B4A SINE B4 80 249 -43 3 754 309 51 0 0 chrX 22202258 22202297 -144447999 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 754 393 39 0 0 chrX 22202297 22202347 -144447949 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 754 807 143 113 0 chrX 22202720 22202853 -144447443 + B1_Mur4 SINE Alu 2 149 -1 3 754 288 0 0 0 chrX 22202856 22202888 -144447408 + (TAGA)n Simple_repeat Simple_repeat 3 34 0 3 754 21 36 0 0 chrX 22202994 22203022 -144447274 + AT_rich Low_complexity Low_complexity 1 28 0 3 754 1345 71 16 0 chrX 22203338 22203520 -144446776 - B2_Mm1a SINE B2 -7 186 2 3 754 2117 148 22 25 chrX 22203899 22204267 -144446029 + ORR1B2 LTR MaLR 1 367 0 3 754 2721 74 55 8 chrX 22204714 22205096 -144445200 + MTB LTR MaLR 1 400 0 3 754 23 68 0 0 chrX 22205507 22205551 -144444745 + AT_rich Low_complexity Low_complexity 1 44 0 3 754 187 338 45 57 chrX 22205563 22205720 -144444576 + MIRb SINE MIR 97 251 -17 3 754 381 271 83 10 chrX 22205921 22206061 -144444235 + B3A SINE B2 23 184 -32 3 754 241 300 27 18 chrX 22206445 22206557 -144443739 + PB1D10 SINE Alu 5 117 0 3 754 216 0 0 0 chrX 22208594 22208618 -144441678 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 754 1108 58 0 0 chrX 22208618 22208755 -144441541 - B1_Mm SINE Alu -10 137 1 3 754 293 0 27 0 chrX 22209228 22209265 -144441031 + (TC)n Simple_repeat Simple_repeat 1 38 0 3 754 450 0 0 0 chrX 22209265 22209315 -144440981 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 754 334 363 0 0 chrX 22209315 22209417 -144440879 - PB1D7 SINE Alu -9 111 10 3 754 317 179 0 0 chrX 22209431 22209487 -144440809 + RCHARR1 DNA MER1_type 80 135 -839 3 754 642 281 60 6 chrX 22209487 22209633 -144440663 + B3 SINE B2 2 156 -60 3 754 426 53 0 0 chrX 22209633 22209690 -144440606 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 754 642 281 60 6 chrX 22209690 22209711 -144440585 + B3 SINE B2 157 178 -38 3 754 1210 41 0 0 chrX 22209737 22209884 -144440412 + B1_Mus2 SINE Alu 1 147 0 3 754 331 284 0 0 chrX 22210429 22210503 -144439793 + Lx8 LINE L1 7179 7252 -221 3 754 590 138 0 0 chrX 22210560 22210647 -144439649 - L1_Mus3 LINE L1 -421 6217 6131 3 754 1613 96 16 4 chrX 22210647 22210898 -144439398 + L1_Mus3 LINE L1 6385 6638 0 3 754 30 0 0 0 chrX 22211014 22211044 -144439252 + AT_rich Low_complexity Low_complexity 1 30 0 3 754 706 253 99 0 chrX 22211406 22211588 -144438708 + B3 SINE B2 2 201 -15 3 754 182 296 118 66 chrX 22211657 22211733 -144438563 + MIRb SINE MIR 101 180 -88 3 754 370 305 57 0 chrX 22212307 22212412 -144437884 + B1F2 SINE Alu 28 138 -11 3 754 894 123 229 0 chrX 22212564 22212743 -144437553 + URR1B DNA MER1_type 5 224 -1 3 754 302 233 0 0 chrX 22213108 22213181 -144437115 - L1M2 LINE L1 -477 5823 5751 3 754 5880 153 52 16 chrX 22213318 22214383 -144435913 - RLTR25A LTR ERVK 0 1103 1 3 754 326 183 14 0 chrX 22215369 22215440 -144434856 + GA-rich Low_complexity Low_complexity 1 72 0 3 754 32 26 0 0 chrX 22215968 22216007 -144434289 + AT_rich Low_complexity Low_complexity 1 39 0 3 754 221 149 42 21 chrX 22216731 22216779 -144433517 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 3 754 185 317 169 12 chrX 22217580 22217663 -144432633 + MIR SINE MIR 18 113 -149 3 754 558 273 69 11 chrX 22218081 22218255 -144432041 + MLT1A0 LTR MaLR 174 357 -8 3 754 348 301 113 0 chrX 22218584 22218717 -144431579 + B1_Mur2 SINE Alu 2 149 0 3 754 41 36 0 0 chrX 22218996 22219051 -144431245 + AT_rich Low_complexity Low_complexity 1 55 0 3 754 1164 245 17 57 chrX 22219546 22219845 -144430451 + MT2A LTR ERVL 7 293 -240 3 754 497 83 0 0 chrX 22219858 22219930 -144430366 + B1_Mur4 SINE Alu 79 150 0 3 754 302 235 29 0 chrX 22219941 22220009 -144430287 + L1MEg LINE L1 1882 1951 -4133 3 754 760 260 96 12 chrX 22220014 22220183 -144430113 + MT2A LTR ERVL 295 546 -55 3 754 333 0 0 0 chrX 22220183 22220220 -144430076 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 754 411 260 135 13 chrX 22220220 22220259 -144430037 + MT2A LTR ERVL 547 601 0 3 754 1090 89 0 0 chrX 22220403 22220549 -144429747 + B1_Mus2 SINE Alu 2 147 0 3 754 192 152 0 0 chrX 22220549 22220582 -144429714 + A-rich Low_complexity Low_complexity 1 33 0 3 754 329 256 0 0 chrX 22220592 22220670 -144429626 + MLT1A0 LTR MaLR 85 162 -203 3 754 431 248 79 44 chrX 22220671 22220785 -144429511 + B1_Mur4 SINE Alu 12 129 -21 3 754 1180 148 181 11 chrX 22220914 22221180 -144429116 + L1_Mus4 LINE L1 6319 6629 -7 3 754 931 228 64 20 chrX 22221274 22221510 -144428786 - ORR1C2 LTR MaLR -7 414 137 3 754 38358 6 0 0 chrX 22221511 22226879 -144423417 + L1Md_A LINE L1 218 5586 -297 3 754 8984 4 0 0 chrX 22226879 22227875 -144422421 + L1Md_A LINE L1 5587 6582 0 3 754 607 168 82 30 chrX 22227881 22228016 -144422280 - ORR1C2 LTR MaLR -232 142 1 3 754 272 218 0 0 chrX 22228024 22228079 -144422217 + MLT1A1 LTR MaLR 352 406 -2 3 754 403 324 38 55 chrX 22228272 22228507 -144421789 + MIRb SINE MIR 38 268 0 3 754 4227 36 0 0 chrX 22229444 22229943 -144420353 - L1Md_T LINE L1 0 6582 6084 3 754 713 246 39 25 chrX 22230090 22230294 -144420002 - B3 SINE B2 -9 207 1 3 754 694 298 54 78 chrX 22230300 22230558 -144419738 + MLT1A0 LTR MaLR 114 365 0 3 754 538 182 82 15 chrX 22230753 22230887 -144419409 - Lx4B LINE L1 -4 7054 6912 3 754 324 0 0 0 chrX 22231390 22231426 -144418870 + (TTA)n Simple_repeat Simple_repeat 2 37 0 3 754 384 22 0 0 chrX 22231946 22231991 -144418305 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 754 271 287 46 0 chrX 22233255 22233342 -144416954 - Tigger5 DNA MER2_type -25 2381 2291 3 754 724 349 21 4 chrX 22233338 22233574 -144416722 - Tigger5 DNA MER2_type -2164 242 3 3 754 1596 31 0 20 chrX 22233916 22234113 -144416183 - B2_Mm1a SINE B2 0 193 1 3 754 528 93 0 0 chrX 22234366 22234441 -144415855 + (TCC)n Simple_repeat Simple_repeat 2 76 0 3 754 560 40 13 0 chrX 22234442 22234517 -144415779 + (TC)n Simple_repeat Simple_repeat 1 76 0 3 754 347 0 23 0 chrX 22235468 22235511 -144414785 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 754 269 100 20 0 chrX 22235540 22235590 -144414706 + (CATA)n Simple_repeat Simple_repeat 1 51 0 3 754 444 322 68 74 chrX 22235648 22235973 -144414323 - MLT2B1 LTR ERVL -185 335 13 3 754 579 322 27 0 chrX 22236058 22236241 -144414055 - MER20 DNA MER1_type -8 211 24 3 754 483 351 20 32 chrX 22236470 22236700 -144413596 + Tigger12 DNA MER2_type 10 240 -1719 3 754 235 357 75 21 chrX 22236830 22237016 -144413280 + Tigger12 DNA MER2_type 1737 1932 -27 3 754 311 344 0 62 chrX 22237025 22237121 -144413175 + PB1D10 SINE Alu 4 93 -24 3 754 207 0 0 0 chrX 22238589 22238612 -144411684 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 754 1015 68 13 58 chrX 22238622 22238777 -144411519 - B1_Mus1 SINE Alu 0 148 1 3 754 1968 39 0 0 chrX 22238810 22239039 -144411257 - L1Md_F3 LINE L1 -241 6343 6115 4 754 2150 35 0 0 chrX 22239039 22239296 -144411000 + L1Md_F3 LINE L1 6326 6582 -2 4 754 565 313 27 0 chrX 22239411 22239561 -144410735 - MER5A DNA MER1_type -28 161 8 4 754 1764 265 82 8 chrX 22240015 22240589 -144409707 + ORR1D2-int LTR MaLR 878 1501 -79 4 754 1102 230 142 50 chrX 22240599 22240938 -144409358 + ORR1D2 LTR MaLR 1 370 0 4 754 362 346 117 8 chrX 22241787 22241915 -144408381 + RSINE1 SINE B4 7 148 -17 4 754 1323 50 0 0 chrX 22242244 22242424 -144407872 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 754 864 287 10 10 chrX 22242433 22242637 -144407659 + B3 SINE B2 7 210 -6 4 754 295 290 30 0 chrX 22242654 22242754 -144407542 - Lx8 LINE L1 -1576 5897 5795 4 754 23 33 0 0 chrX 22243019 22243049 -144407247 + AT_rich Low_complexity Low_complexity 1 30 0 4 754 694 229 0 15 chrX 22243063 22243196 -144407100 - B1_Mm SINE Alu -10 137 7 4 754 303 248 108 101 chrX 22243196 22243211 -144407085 - B4 SINE B4 -76 216 68 4 754 839 240 122 119 chrX 22243478 22243856 -144406440 + MTE2a LTR MaLR 1 379 0 4 754 1496 320 181 59 chrX 22243860 22244249 -144406047 + MTE2a-int LTR MaLR 12 460 -910 4 754 4016 140 27 5 chrX 22244249 22244886 -144405410 + Lx4A LINE L1 6405 7055 -3 4 754 2337 287 78 65 chrX 22244886 22245697 -144404599 + MTE2a-int LTR MaLR 461 1477 -103 4 754 396 0 0 0 chrX 22245697 22245741 -144404555 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 4 754 1084 67 0 0 chrX 22245741 22245875 -144404421 - B1_Mm SINE Alu -13 134 1 4 754 261 0 0 0 chrX 22245875 22245904 -144404392 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 754 2337 286 73 65 chrX 22245904 22246018 -144404278 + MTE2a-int LTR MaLR 1478 1578 -2 4 754 255 269 30 0 chrX 22246015 22246082 -144404214 + MTE2a LTR MaLR 1 69 -350 4 754 1017 227 180 126 chrX 22246453 22246891 -144403405 - MT2A LTR ERVL -71 462 1 4 754 183 320 0 0 chrX 22246891 22246941 -144403355 - MIRm SINE MIR -134 142 93 4 754 882 237 164 60 chrX 22246986 22247322 -144402974 - ORR1D1 LTR MaLR -3 371 1 4 754 3651 225 32 12 chrX 22247322 22248132 -144402164 - ORR1D1-int LTR MaLR 0 1370 545 4 754 814 277 79 140 chrX 22248113 22248571 -144401725 - ORR1D1-int LTR MaLR -940 430 1 4 754 1527 59 0 0 chrX 22248581 22248767 -144401529 - B2_Mm1t SINE B2 -6 187 2 4 754 1461 229 59 6 chrX 22248776 22249131 -144401165 - ORR1D1 LTR MaLR 0 374 1 4 754 534 289 33 137 chrX 22249145 22249386 -144400910 - B3 SINE B2 0 216 1 4 754 452 335 18 31 chrX 22249782 22249945 -144400351 - MLT1F1 LTR MaLR -12 557 397 4 754 952 310 65 27 chrX 22250484 22250776 -144399520 + Tigger7 DNA MER2_type 7 309 -2182 4 754 591 228 136 10 chrX 22250782 22250981 -144399315 + Tigger7 DNA MER2_type 2138 2361 -130 4 754 2417 171 102 2 chrX 22251194 22251674 -144398622 + Lx2B LINE L1 6463 6990 -10 4 754 324 295 0 13 chrX 22251705 22251784 -144398512 - RSINE1 SINE B4 -86 79 2 4 754 768 22 0 0 chrX 22251817 22251907 -144398389 + (TC)n Simple_repeat Simple_repeat 1 90 0 4 754 231 343 48 76 chrX 22252155 22252300 -144397996 + Tigger7 DNA MER2_type 22 162 -2329 4 754 204 328 16 0 chrX 22253138 22253199 -144397097 - L2b LINE L2 -2 3373 3312 4 754 351 167 0 0 chrX 22253694 22253760 -144396536 + (TA)n Simple_repeat Simple_repeat 1 66 0 4 754 315 0 0 0 chrX 22254344 22254379 -144395917 + (TTA)n Simple_repeat Simple_repeat 2 36 0 4 754 938 48 88 8 chrX 22255002 22255127 -144395169 + B1_Mus2 SINE Alu 1 135 -12 4 754 800 244 16 17 chrX 22255216 22255401 -144394895 - B3 SINE B2 -9 186 18 4 754 684 339 94 3 chrX 22257133 22257461 -144392835 - Lx8 LINE L1 -145 7328 6971 4 754 1098 95 0 0 chrX 22258016 22258163 -144392133 + B1_Mus2 SINE Alu 1 147 0 4 754 918 32 0 8 chrX 22260037 22260162 -144390134 - L1Md_F2 LINE L1 -12 6570 6447 4 754 2000 21 42 0 chrX 22260162 22260400 -144389896 + L1Md_F2 LINE L1 6101 6348 -234 4 754 273 288 0 36 chrX 22261509 22261592 -144388704 + L1MA8 LINE L1 41 120 -6910 4 754 412 121 48 16 chrX 22261655 22261781 -144388515 + (CAGAGA)n Simple_repeat Simple_repeat 2 131 0 4 754 1568 214 126 3 chrX 22262532 22262898 -144387398 + MTD LTR MaLR 1 411 -8 4 754 1468 247 38 142 chrX 22263639 22264379 -144385917 + RMER19C LTR ERVK 1 611 0 4 754 252 100 0 0 chrX 22264569 22264609 -144385687 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 754 368 347 79 24 chrX 22264609 22264736 -144385560 - RSINE1 SINE B4 -21 144 11 4 754 314 323 36 20 chrX 22264796 22264992 -144385304 + L1MA8 LINE L1 4995 5193 -1907 4 754 623 211 28 70 chrX 22264999 22265142 -144385154 + B1_Mur4 SINE Alu 1 137 -13 4 754 609 258 178 28 chrX 22265170 22265529 -144384767 + L1MA8 LINE L1 6444 6856 -395 4 754 267 104 0 0 chrX 22265560 22265608 -144384688 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 754 772 176 15 30 chrX 22265947 22266082 -144384214 + B1_Mus1 SINE Alu 1 133 -15 4 754 1367 254 152 27 chrX 22266113 22266369 -144383927 + L1MA6 LINE L1 5350 5641 -659 4 754 705 85 0 0 chrX 22266369 22266475 -144383821 + (TG)n Simple_repeat Simple_repeat 2 107 0 4 754 1367 254 152 27 chrX 22266475 22267020 -144383276 + L1MA6 LINE L1 5642 6251 -49 4 754 403 211 8 141 chrX 22267245 22267366 -144382930 + PB1D9 SINE Alu 3 107 -13 4 754 450 53 0 0 chrX 22267371 22267428 -144382868 + (TAAA)n Simple_repeat Simple_repeat 2 58 0 4 754 1533 221 143 48 chrX 22267485 22268112 -144382184 + L1_Mur3 LINE L1 1243 1929 -3951 4 754 678 324 67 27 chrX 22268207 22268581 -144381715 + Lx7 LINE L1 6218 6606 -1090 4 754 334 238 0 24 chrX 22268644 22268726 -144381570 + BC1_Mm scRNA scRNA 22 101 -51 4 754 437 361 0 8 chrX 22268799 22268919 -144381377 - RSINE1 SINE B4 -6 159 41 4 754 181 0 69 0 chrX 22269318 22269347 -144380949 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 754 324 0 0 0 chrX 22269811 22269847 -144380449 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 754 751 232 88 29 chrX 22270000 22270204 -144380092 + B3 SINE B2 1 216 0 4 754 1369 177 71 4 chrX 22270553 22270819 -144379477 - L1_Rod LINE L1 -6487 685 402 4 754 379 256 99 0 chrX 22270875 22271030 -144379266 - RMER21A LTR ERV1 -405 542 261 4 754 828 285 31 103 chrX 22271063 22271687 -144378609 - L1_Rod LINE L1 -6767 405 23 4 754 282 95 0 0 chrX 22271785 22271827 -144378469 + (CATA)n Simple_repeat Simple_repeat 2 43 0 4 754 287 155 35 12 chrX 22271904 22271989 -144378307 + (TA)n Simple_repeat Simple_repeat 1 87 0 4 754 357 24 0 0 chrX 22271989 22272031 -144378265 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 754 701 272 43 29 chrX 22272104 22272312 -144377984 + B3 SINE B2 1 211 -5 4 754 231 288 68 0 chrX 22272392 22272465 -144377831 - MIR3 SINE MIR -47 161 84 4 754 526 233 102 29 chrX 22273094 22273231 -144377065 - B1_Mur1 SINE Alu -1 148 2 4 754 207 0 0 0 chrX 22273547 22273570 -144376726 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 4 754 1484 171 34 113 chrX 22273571 22273979 -144376317 - Lx4A LINE L1 -16 7042 6667 4 754 1913 21 0 21 chrX 22274454 22274693 -144375603 + L1Md_F2 LINE L1 6349 6582 0 4 754 450 53 0 0 chrX 22274900 22274957 -144375339 + (GA)n Simple_repeat Simple_repeat 2 58 0 4 754 280 238 12 12 chrX 22275838 22275919 -144374377 + GA-rich Low_complexity Low_complexity 2 82 0 4 754 3039 51 54 0 chrX 22275920 22276310 -144373986 + RLTR10A LTR ERVK 1 411 0 4 754 405 262 109 11 chrX 22276463 22276637 -144373659 - L1MD3 LINE L1 -130 7865 7675 4 754 284 288 57 33 chrX 22276802 22276924 -144373372 - MLT1D LTR MaLR 0 505 381 4 754 200 277 59 24 chrX 22276970 22277055 -144373241 + L2 LINE L2 2720 2807 -612 4 754 542 279 0 60 chrX 22277303 22277452 -144372844 - B1_Mur1 SINE Alu -1 148 9 4 754 1437 172 71 111 chrX 22277458 22277566 -144372730 - ORR1C1 LTR MaLR -4 374 291 4 754 1197 48 0 0 chrX 22277566 22277711 -144372585 - B1_Mm SINE Alu -2 145 1 4 754 1444 172 71 111 chrX 22277711 22277830 -144372466 - ORR1C1 LTR MaLR -88 290 184 4 754 606 28 0 0 chrX 22277830 22277902 -144372394 + (GA)n Simple_repeat Simple_repeat 2 73 0 4 754 1444 172 71 111 chrX 22277902 22278025 -144372271 - ORR1C1 LTR MaLR -195 183 38 4 754 315 165 39 0 chrX 22278313 22278416 -144371880 + (TCTG)n Simple_repeat Simple_repeat 2 108 0 4 754 680 288 0 28 chrX 22278440 22278583 -144371713 - RSINE1 SINE B4 -12 153 15 4 754 23 0 0 0 chrX 22279043 22279066 -144371230 + AT_rich Low_complexity Low_complexity 1 23 0 4 754 1355 228 105 31 chrX 22279650 22280032 -144370264 + RLTR16 LTR ERVK 1 414 -91 4 754 423 0 0 0 chrX 22280032 22280079 -144370217 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 754 1355 228 105 31 chrX 22280079 22280153 -144370143 + RLTR16 LTR ERVK 415 491 -14 4 754 407 283 104 0 chrX 22280323 22280429 -144369867 + B3 SINE B2 1 117 -99 4 754 378 0 0 0 chrX 22280815 22280857 -144369439 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 94 210 354 113 72 chrX 22282069 22282264 -144368032 + B4 SINE B4 18 220 -72 4 94 560 219 83 38 chrX 22282132 22282265 -144368031 + B1_Mur1 SINE Alu 6 144 -5 4 755 794 196 0 20 chrX 22282272 22282418 -144367878 + B1_Mur3 SINE Alu 1 143 -6 4 755 1845 128 69 16 chrX 22283288 22283591 -144366705 - ORR1A2 LTR MaLR -8 319 1 4 755 739 157 36 22 chrX 22284542 22284679 -144365617 - B1_Mur2 SINE Alu -9 140 2 4 755 208 337 87 0 chrX 22284949 22285041 -144365255 + L2c LINE L2 2988 3087 -300 4 755 462 262 60 55 chrX 22285323 22285505 -144364791 + RMER15 LTR ERVL 386 568 -7 4 755 525 229 9 0 chrX 22285833 22285942 -144364354 - B1_Mur1 SINE Alu 0 149 40 4 755 1012 204 48 5 chrX 22286200 22286407 -144363889 - URR1B DNA MER1_type -9 216 1 4 755 618 116 0 0 chrX 22286463 22286549 -144363747 - B1_Mus2 SINE Alu -16 131 46 4 755 290 229 69 28 chrX 22286491 22286563 -144363733 - RLTR25A LTR ERVK -521 582 508 4 755 292 24 0 0 chrX 22286565 22286607 -144363689 + L1_Mus1 LINE L1 5932 5973 -594 4 755 3368 89 20 0 chrX 22286609 22287069 -144363227 + L1_Mus1 LINE L1 6099 6567 0 4 755 4314 189 96 29 chrX 22287213 22288314 -144361982 + L1Md_F LINE L1 1 1139 -5380 4 755 13785 187 194 34 chrX 22288296 22289026 -144361270 + L1_Mus1 LINE L1 1219 1992 -3885 4 755 866 19 0 0 chrX 22289026 22289131 -144361165 + B1_Mm SINE Alu 40 144 -3 4 755 1065 70 0 0 chrX 22289131 22289274 -144361022 + (GAAA)n Simple_repeat Simple_repeat 2 144 0 4 755 13785 187 194 34 chrX 22289274 22289618 -144360678 + L1_Mus1 LINE L1 1993 2325 -3552 4 755 1304 92 11 0 chrX 22289618 22289802 -144360494 + B2_Mm1t SINE B2 2 187 -6 4 755 13785 187 194 34 chrX 22289802 22290602 -144359694 + L1_Mus1 LINE L1 2326 3122 -2755 4 755 387 0 0 0 chrX 22290602 22290645 -144359651 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 4 755 13785 144 126 24 chrX 22290645 22293368 -144356928 + L1_Mus1 LINE L1 3123 6567 0 4 755 231 146 0 0 chrX 22293419 22293460 -144356836 + (CAA)n Simple_repeat Simple_repeat 2 42 0 5 755 719 211 0 0 chrX 22293615 22293743 -144356553 + B1_Mur1 SINE Alu 21 148 -1 5 755 288 67 50 0 chrX 22294621 22294681 -144355615 + (TTTTG)n Simple_repeat Simple_repeat 1 63 0 5 755 1816 202 98 18 chrX 22294991 22295430 -144354866 + RMER5 LTR ERV1 61 534 0 5 755 402 341 38 38 chrX 22295946 22296159 -144354137 - RMER15-int LTR ERVL -2776 2223 2011 5 755 1620 16 0 5 chrX 22296918 22297113 -144353183 + L1Md_F3 LINE L1 6377 6570 -14 5 755 955 90 113 0 chrX 22297127 22297260 -144353036 + B1_Mus1 SINE Alu 1 148 0 5 755 252 0 0 0 chrX 22297260 22297288 -144353008 + (TAA)n Simple_repeat Simple_repeat 1 28 0 5 755 363 44 0 0 chrX 22297288 22297333 -144352963 + (GAA)n Simple_repeat Simple_repeat 2 46 0 5 755 872 151 0 33 chrX 22297341 22297492 -144352804 + B1_Mus1 SINE Alu 1 146 -2 5 755 662 236 21 7 chrX 22297533 22297674 -144352622 + B1_Mur1 SINE Alu 1 143 -6 5 755 4590 134 30 19 chrX 22298615 22299565 -144350731 + Lx2 LINE L1 5893 6963 -37 5 755 3821 47 19 0 chrX 22299667 22300133 -144350163 - MT2C_Mm LTR ERVL 0 475 1 5 755 1159 54 0 33 chrX 22300577 22300729 -144349567 + B1_Mus2 SINE Alu 1 147 0 5 755 291 315 35 69 chrX 22301574 22301748 -144348548 + RLTR25A LTR ERVK 936 1103 0 5 755 426 198 32 67 chrX 22302110 22302240 -144348056 - B1_Mur3 SINE Alu -1 119 2 5 755 255 314 76 76 chrX 22302240 22302323 -144347973 - B4 SINE B4 -208 84 2 5 755 1271 97 17 0 chrX 22302368 22302543 -144347753 + B2_Mm2 SINE B2 3 180 -15 5 755 231 36 0 0 chrX 22302545 22302573 -144347723 + (CAA)n Simple_repeat Simple_repeat 2 29 0 5 755 739 196 28 7 chrX 22303143 22303287 -144347009 + B1_Mm SINE Alu 1 147 0 5 755 423 0 0 0 chrX 22303911 22303958 -144346338 + (TC)n Simple_repeat Simple_repeat 2 48 0 5 755 495 121 82 45 chrX 22303993 22304108 -144346188 + PB1D9 SINE Alu 1 148 0 5 755 210 71 0 0 chrX 22304122 22304150 -144346146 + (CAG)n Simple_repeat Simple_repeat 1 28 0 5 755 380 311 0 37 chrX 22305210 22305317 -144344979 + B1_Mur3 SINE Alu 1 103 -46 5 755 261 0 0 0 chrX 22306334 22306363 -144343933 + (TAA)n Simple_repeat Simple_repeat 1 29 0 5 755 1150 64 0 0 chrX 22306363 22306504 -144343792 + B1_Mm SINE Alu 2 142 -5 5 755 560 14 14 0 chrX 22306553 22306622 -144343674 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 5 755 182 290 0 46 chrX 22306652 22306717 -144343579 + L3 LINE CR1 3613 3674 -815 5 755 594 209 16 11 chrX 22306803 22306924 -144343372 - B1_Mur3 SINE Alu -2 125 9 5 755 319 268 12 15 chrX 22307025 22307127 -144343169 - PB1D9 SINE Alu -19 101 1 5 755 558 162 36 29 chrX 22307168 22307308 -144342988 - Lx9 LINE L1 -10 7634 7494 5 755 294 264 87 90 chrX 22307364 22307630 -144342666 + RMER10A LTR ERVL 165 429 -13 5 755 1035 125 0 24 chrX 22307894 22308058 -144342238 - ORR1A4 LTR MaLR -21 308 149 5 755 1218 153 5 0 chrX 22308058 22308267 -144342029 - Lx2 LINE L1 0 6997 6788 5 755 1019 128 0 0 chrX 22308271 22308427 -144341869 - Lx2 LINE L1 -352 6645 6490 5 755 426 42 14 0 chrX 22308424 22308495 -144341801 - MusHAL1 LINE L1 -599 2113 2042 5 755 11053 153 6 6 chrX 22308496 22310541 -144339755 - L1_Mur1 LINE L1 -810 5076 3031 5 755 1230 168 13 0 chrX 22310544 22310770 -144339526 - L1VL4 LINE L1 -6060 242 14 5 755 622 121 197 132 chrX 22310771 22310923 -144339373 - ORR1A4 LTR MaLR -228 166 1 5 755 468 318 53 10 chrX 22311017 22311237 -144339059 + MLT1A1 LTR MaLR 93 362 -46 5 755 199 241 12 12 chrX 22311277 22311361 -144338935 + GA-rich Low_complexity Low_complexity 3 86 0 5 755 439 276 35 0 chrX 22311591 22311707 -144338589 - B1_Mur2 SINE Alu 0 149 30 5 755 295 271 69 104 chrX 22312416 22312640 -144337656 - MIRc SINE MIR -31 237 10 5 755 22 70 0 0 chrX 22312661 22312704 -144337592 + AT_rich Low_complexity Low_complexity 1 43 0 5 755 276 30 0 0 chrX 22313196 22313229 -144337067 + (TC)n Simple_repeat Simple_repeat 2 34 0 5 755 483 18 0 0 chrX 22313229 22313284 -144337012 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 755 2909 44 8 0 chrX 22313297 22313663 -144336633 + MTA_Mm LTR MaLR 28 396 0 5 755 8547 57 6 2 chrX 22313663 22314756 -144335540 + MTA_Mm-int LTR MaLR 1 1098 0 5 755 3231 38 10 0 chrX 22314756 22315148 -144335148 + MTA_Mm LTR MaLR 1 396 0 5 755 359 316 89 15 chrX 22315592 22315727 -144334569 + B1F SINE Alu 3 147 -2 5 755 1324 249 95 3 chrX 22315734 22316072 -144334224 - MTD LTR MaLR -50 369 1 5 755 283 243 90 36 chrX 22316178 22316289 -144334007 + MER102a DNA MER1_type 11 133 -197 5 755 216 282 0 0 chrX 22316634 22316705 -144333591 - MIRc SINE MIR -4 264 194 5 755 572 319 38 46 chrX 22316751 22316988 -144333308 + MIRb SINE MIR 33 267 -1 5 755 608 270 154 5 chrX 22317430 22317832 -144332464 - L1M2 LINE L1 -1382 4761 4300 5 755 707 206 58 22 chrX 22317843 22317982 -144332314 - B1_Mur2 SINE Alu 0 149 6 5 755 441 289 55 28 chrX 22317988 22318205 -144332091 - L1M2 LINE L1 -1832 4308 4086 5 755 1057 97 14 0 chrX 22318209 22318353 -144331943 + B1_Mus1 SINE Alu 2 147 -1 5 755 219 109 21 21 chrX 22318353 22318400 -144331896 + (CAAA)n Simple_repeat Simple_repeat 1 47 0 5 755 2298 96 3 28 chrX 22318410 22318747 -144331549 + Lx3A LINE L1 6638 6967 -14 5 755 261 0 0 0 chrX 22318747 22318776 -144331520 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 5 755 2298 96 3 28 chrX 22318776 22318791 -144331505 + Lx3A LINE L1 6968 6981 0 5 755 445 279 27 38 chrX 22318795 22318981 -144331315 - L1M2 LINE L1 -2058 4082 3899 5 755 2669 123 11 0 chrX 22319071 22319453 -144330843 - ORR1B1 LTR MaLR 0 394 9 5 755 242 179 18 18 chrX 22319561 22319618 -144330678 + CT-rich Low_complexity Low_complexity 1 57 0 5 755 588 206 96 67 chrX 22319628 22319763 -144330533 - B1_Mur1 SINE Alu -9 140 2 5 755 336 291 53 24 chrX 22319980 22320322 -144329974 - L1M2 LINE L1 -3455 2685 2328 5 755 1574 186 103 0 chrX 22320338 22320639 -144329657 - ORR1B2 LTR MaLR -35 332 1 5 755 377 179 106 0 chrX 22320705 22320812 -144329484 - L1M4b LINE L1 -3837 3166 3064 5 755 615 48 0 0 chrX 22320838 22320921 -144329375 + (ATTTG)n Simple_repeat Simple_repeat 2 84 0 5 755 646 205 34 0 chrX 22320921 22321038 -144329258 - B1_Mur2 SINE Alu -10 139 19 5 755 859 234 36 21 chrX 22321109 22321301 -144328995 + ORR1D1 LTR MaLR 1 195 -179 5 755 648 351 22 86 chrX 22321662 22321815 -144328481 + MER21B LTR ERV1 403 533 -330 5 755 1253 27 0 0 chrX 22321815 22321962 -144328334 - B1_Mm SINE Alu 0 147 1 5 755 648 351 22 86 chrX 22321962 22322179 -144328117 + MER21B LTR ERV1 534 749 -114 5 755 256 326 10 10 chrX 22322507 22322603 -144327693 - L1M4c LINE L1 -4625 1759 1664 5 755 814 194 0 0 chrX 22322623 22322752 -144327544 - B1_Mur4 SINE Alu -21 129 1 5 755 378 233 46 114 chrX 22322646 22322777 -144327519 - MT2B LTR ERVL -343 258 137 5 755 824 250 38 5 chrX 22322801 22323010 -144327286 - B3 SINE B2 0 216 1 5 755 339 302 25 67 chrX 22323010 22323248 -144327048 - L1M2 LINE L1 -4337 2770 2543 5 755 703 89 0 26 chrX 22323403 22323518 -144326778 + (TTTC)n Simple_repeat Simple_repeat 1 112 0 5 755 363 299 46 0 chrX 22323518 22323605 -144326691 - B1_Mur1 SINE Alu -21 128 38 5 755 447 19 0 0 chrX 22323608 22323660 -144326636 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 755 1123 225 190 17 chrX 22324229 22324582 -144325714 - MTD LTR MaLR 0 419 6 5 755 260 286 36 0 chrX 22324830 22324942 -144325354 - L1M2 LINE L1 -6838 192 77 5 755 25 0 0 0 chrX 22325397 22325422 -144324874 + AT_rich Low_complexity Low_complexity 1 25 0 5 755 337 318 190 29 chrX 22326098 22326481 -144323815 + MLT1D LTR MaLR 61 505 0 5 755 485 308 45 60 chrX 22326588 22326854 -144323442 + MLT1B LTR MaLR 4 265 -125 5 755 1079 228 59 2 chrX 22326868 22327218 -144323078 + MTD LTR MaLR 1 419 0 5 755 325 311 131 0 chrX 22327218 22327338 -144322958 + MLT1B LTR MaLR 329 464 -3 5 755 665 171 12 99 chrX 22327463 22327625 -144322671 - B1_Mur2 SINE Alu -1 148 1 5 755 3977 82 24 2 chrX 22327843 22328382 -144321914 - L1_Mus3 LINE L1 -1 6637 6087 5 755 2114 55 0 0 chrX 22328461 22328733 -144321563 + L1Md_F2 LINE L1 5315 5586 -297 5 755 8318 40 0 6 chrX 22328733 22329734 -144320562 + L1Md_F2 LINE L1 5587 6581 -1 5 755 3650 122 5 5 chrX 22329734 22330320 -144319976 + L1_Mm LINE L1 5294 5879 -4 5 755 344 188 91 34 chrX 22330577 22330644 -144319652 + MT2A LTR ERVL 1 72 -461 5 755 400 154 0 0 chrX 22330644 22330709 -144319587 + MT2A LTR ERVL 1 65 -468 5 755 2164 198 70 4 chrX 22330733 22331216 -144319080 + MERVL_2A-int LTR ERVL 4745 5259 -502 5 755 587 119 107 33 chrX 22331217 22331286 -144319010 + MT2A LTR ERVL 402 470 -63 5 755 276 77 0 0 chrX 22331286 22331325 -144318971 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 755 587 119 107 33 chrX 22331325 22331377 -144318919 + MT2A LTR ERVL 471 532 -1 5 755 1167 75 7 0 chrX 22331717 22331864 -144318432 + B1_Mus1 SINE Alu 1 148 0 5 755 414 0 0 0 chrX 22332925 22332971 -144317325 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 755 24 0 0 0 chrX 22333025 22333049 -144317247 + AT_rich Low_complexity Low_complexity 1 24 0 5 755 379 255 19 76 chrX 22333049 22333206 -144317090 - B1_Mur1 SINE Alu 0 149 2 5 755 712 281 9 16 chrX 22333257 22333462 -144316834 - B3A SINE B2 -17 199 1 5 755 2840 153 71 4 chrX 22333729 22334239 -144316057 + L1VL2 LINE L1 283 826 -5509 5 755 1740 87 42 25 chrX 22334231 22334514 -144315782 - Lx3_Mus LINE L1 -699 6310 6023 5 755 4887 131 32 3 chrX 22334514 22335272 -144315024 + Lx LINE L1 5846 6625 -29 5 755 12731 95 12 14 chrX 22335274 22335582 -144314714 + MusHAL1 LINE L1 132 447 -2265 5 755 1616 42 0 0 chrX 22335582 22335775 -144314521 + B2_Mm1a SINE B2 1 193 0 5 755 12731 95 12 14 chrX 22335775 22337425 -144312871 + MusHAL1 LINE L1 448 2085 -627 5 755 331 244 228 0 chrX 22337515 22337638 -144312658 + RSINE1 SINE B4 3 153 -12 5 755 569 289 26 11 chrX 22337657 22337846 -144312450 + B3A SINE B2 6 197 -1 5 755 454 291 30 7 chrX 22337881 22338016 -144312280 + ID_B1 SINE B4 82 219 -5 5 755 339 333 0 51 chrX 22338025 22338123 -144312173 + RSINE1 SINE B4 27 119 -46 5 755 273 89 0 0 chrX 22338135 22338180 -144312116 + (TC)n Simple_repeat Simple_repeat 2 46 0 6 755 450 0 0 0 chrX 22338182 22338232 -144312064 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 755 240 35 0 0 chrX 22338232 22338260 -144312036 + (GA)n Simple_repeat Simple_repeat 2 30 0 6 755 26 64 0 0 chrX 22338815 22338862 -144311434 + AT_rich Low_complexity Low_complexity 1 47 0 6 755 311 319 8 8 chrX 22338872 22338989 -144311307 + PB1D10 SINE Alu 1 117 0 6 755 257 263 143 57 chrX 22339005 22339110 -144311186 - Tigger5 DNA MER2_type -90 2316 2203 6 755 3768 160 14 3 chrX 22339145 22339785 -144310511 + Lx4B LINE L1 6391 7037 -21 6 755 183 42 0 0 chrX 22339785 22339809 -144310487 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 6 755 1105 51 14 0 chrX 22339827 22339965 -144310331 - B1_Mm SINE Alu -5 142 3 6 755 22 0 0 0 chrX 22340025 22340047 -144310249 + AT_rich Low_complexity Low_complexity 1 22 0 6 755 1047 144 4 137 chrX 22341509 22341735 -144308561 + URR1B DNA MER1_type 1 196 -29 6 755 699 278 43 128 chrX 22342051 22342513 -144307783 + L1M3 LINE L1 4499 4921 -1219 6 755 999 259 15 60 chrX 22342700 22342967 -144307329 - ORR1D2 LTR MaLR -8 362 108 6 755 16684 55 82 1 chrX 22342970 22345970 -144304326 - L1Md_F2 LINE L1 0 6582 3328 6 755 325 316 25 8 chrX 22345972 22346090 -144304206 - ORR1D2 LTR MaLR -254 120 1 6 755 406 278 17 27 chrX 22346229 22346399 -144303897 + L1M3 LINE L1 5305 5476 -821 6 755 721 258 29 73 chrX 22346480 22346685 -144303611 - B3 SINE B2 -6 210 15 6 755 463 258 0 10 chrX 22347915 22348013 -144302283 - PB1D10 SINE Alu -7 110 14 6 755 428 286 186 42 chrX 22348006 22348199 -144302097 - B4 SINE B4 -62 230 10 6 755 414 0 0 0 chrX 22348224 22348270 -144302026 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 6 755 554 104 0 0 chrX 22348270 22348347 -144301949 - BC1_Mm scRNA scRNA -75 77 1 6 755 21 71 0 0 chrX 22348352 22348394 -144301902 + AT_rich Low_complexity Low_complexity 1 42 0 6 755 33759 81 4 7 chrX 22348437 22353857 -144296439 - L1Md_F2 LINE L1 -12 6570 1187 6 755 7390 2 0 0 chrX 22353857 22354674 -144295622 - L1Md_A LINE L1 0 6582 5766 6 755 6690 78 0 20 chrX 22354674 22355502 -144294794 - L1Md_F2 LINE L1 -5430 1186 360 6 755 363 44 0 0 chrX 22355708 22355753 -144294543 + (TA)n Simple_repeat Simple_repeat 1 45 0 6 755 318 316 101 0 chrX 22356594 22356673 -144293623 + B4A SINE B4 64 150 -142 6 755 775 199 14 28 chrX 22356612 22356757 -144293539 + B1_Mus2 SINE Alu 5 147 0 6 755 486 304 24 0 chrX 22356810 22356935 -144293361 + B3 SINE B2 1 128 -88 6 755 549 232 15 39 chrX 22357684 22357814 -144292482 - B1_Mur3 SINE Alu 0 149 23 6 755 1011 235 0 0 chrX 22357937 22358120 -144292176 - B3 SINE B2 -33 183 1 6 755 2793 58 0 0 chrX 22358168 22358514 -144291782 + ORR1A1 LTR MaLR 1 346 0 6 755 330 192 0 0 chrX 22358573 22358625 -144291671 - B1_Mus2 SINE Alu -94 53 2 6 755 483 18 0 0 chrX 22358961 22359017 -144291279 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 755 383 239 25 0 chrX 22359019 22359115 -144291181 - L1M3 LINE L1 -492 5688 5591 6 755 642 294 12 24 chrX 22359275 22359526 -144290770 - L1M3 LINE L1 -707 5605 5358 6 755 237 220 33 33 chrX 22359530 22359577 -144290719 + (CATATA)n Simple_repeat Simple_repeat 6 53 0 6 755 4766 53 2 34 chrX 22359577 22360200 -144290096 - L1_Mus2 LINE L1 -1 6565 5963 6 755 237 220 33 33 chrX 22360200 22360213 -144290083 + (CATATA)n Simple_repeat Simple_repeat 6 18 0 6 755 929 266 116 60 chrX 22360235 22360720 -144289576 - L1M3 LINE L1 -846 5294 4776 6 755 1187 100 0 11 chrX 22360720 22360902 -144289394 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 755 929 266 116 60 chrX 22360902 22361004 -144289292 - L1M3 LINE L1 -1365 4775 4674 6 755 279 0 0 0 chrX 22361005 22361036 -144289260 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 755 1215 48 0 0 chrX 22361036 22361181 -144289115 - B1_Mm SINE Alu -2 145 1 6 755 611 220 0 0 chrX 22361218 22361327 -144288969 + B3 SINE B2 1 109 -107 6 755 384 298 100 32 chrX 22361369 22361619 -144288677 - L1M3 LINE L1 -1476 4664 4398 6 755 234 292 342 0 chrX 22362219 22362380 -144287916 - MIR SINE MIR -46 216 1 6 755 789 154 0 0 chrX 22362609 22362739 -144287557 + L1_Mur1 LINE L1 3712 3841 -2045 6 755 186 322 17 0 chrX 22362940 22362999 -144287297 - MER5A DNA MER1_type -129 60 1 6 755 477 0 0 0 chrX 22363400 22363453 -144286843 + (TC)n Simple_repeat Simple_repeat 1 53 0 6 755 196 214 0 82 chrX 22364760 22364821 -144285475 - MIRc SINE MIR -58 210 155 6 755 871 225 75 0 chrX 22364871 22365071 -144285225 + B3 SINE B2 2 216 0 6 755 262 84 55 27 chrX 22366003 22366076 -144284220 + (TTTG)n Simple_repeat Simple_repeat 2 76 0 6 755 472 225 290 0 chrX 22366395 22366533 -144283763 - B3 SINE B2 -38 178 1 6 755 252 0 0 0 chrX 22366615 22366643 -144283653 + (TC)n Simple_repeat Simple_repeat 1 28 0 6 755 360 0 0 0 chrX 22366643 22366682 -144283614 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 755 660 326 80 25 chrX 22366743 22367105 -144283191 + MLT1D LTR MaLR 124 505 0 6 755 26 30 0 0 chrX 22367208 22367241 -144283055 + AT_rich Low_complexity Low_complexity 1 33 0 6 755 2085 121 12 64 chrX 22367578 22367923 -144282373 + ORR1A2 LTR MaLR 1 327 0 6 755 436 326 7 7 chrX 22368323 22368468 -144281828 + B1F SINE Alu 2 146 -3 6 755 230 293 69 0 chrX 22369317 22369375 -144280921 + B3 SINE B2 131 192 -24 6 755 555 286 9 47 chrX 22369453 22369666 -144280630 + L1M2 LINE L1 5568 5772 -519 6 755 381 22 0 0 chrX 22369670 22369716 -144280580 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 755 477 0 0 0 chrX 22369716 22369768 -144280528 + (TA)n Simple_repeat Simple_repeat 2 54 0 6 755 256 382 0 19 chrX 22369792 22369896 -144280400 + ID4 SINE ID 2 103 -49 6 755 611 283 78 5 chrX 22370010 22370202 -144280094 - B3 SINE B2 -10 206 1 6 755 21 0 0 0 chrX 22370321 22370342 -144279954 + AT_rich Low_complexity Low_complexity 1 21 0 6 755 285 306 83 7 chrX 22370403 22370548 -144279748 + L1MA5A LINE L1 5494 5649 -642 6 755 406 291 176 5 chrX 22370618 22370856 -144279440 + L1MA5A LINE L1 5628 5943 -357 6 755 233 57 29 0 chrX 22370964 22370999 -144279297 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 755 624 279 65 8 chrX 22371061 22371245 -144279051 - B3 SINE B2 0 198 1 6 755 1434 277 141 30 chrX 22371269 22372076 -144278220 + L1MC1 LINE L1 5417 6313 -20 6 755 634 141 33 0 chrX 22372152 22372273 -144278023 + Lx4A LINE L1 6934 7058 0 6 755 23 0 0 0 chrX 22372573 22372596 -144277700 + AT_rich Low_complexity Low_complexity 1 23 0 6 755 8652 190 43 30 chrX 22372651 22373700 -144276596 + L1_Mur3 LINE L1 549 1588 -4292 6 755 3282 29 0 0 chrX 22373700 22374084 -144276212 + L1Md_A LINE L1 6199 6582 0 6 755 8652 174 36 69 chrX 22374084 22375831 -144274465 + L1_Mur3 LINE L1 1589 3306 -2574 6 755 2889 161 77 9 chrX 22375829 22376387 -144273909 + L1_Mur3 LINE L1 5068 5663 -217 6 755 2715 218 52 91 chrX 22376385 22377127 -144273169 - Lx7 LINE L1 -92 7604 6893 6 755 816 11 0 0 chrX 22377127 22377220 -144273076 + (TC)n Simple_repeat Simple_repeat 2 94 0 6 755 2715 218 52 91 chrX 22377220 22377270 -144273026 - Lx7 LINE L1 -804 6892 6843 6 755 384 281 31 20 chrX 22377270 22377368 -144272928 - B1_Mm SINE Alu -47 100 2 6 755 232 303 22 96 chrX 22377368 22377405 -144272891 - MT2B LTR ERVL -346 255 131 6 755 381 184 0 0 chrX 22377488 22377597 -144272699 + CT-rich Low_complexity Low_complexity 1 109 0 6 755 303 28 0 0 chrX 22377632 22377668 -144272628 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 6 755 405 287 135 35 chrX 22377673 22377886 -144272410 - Lx8 LINE L1 -416 7280 7053 6 755 213 200 0 0 chrX 22378035 22378070 -144272226 + polypurine Low_complexity Low_complexity 2 36 0 6 755 387 354 30 41 chrX 22378315 22378567 -144271729 + MIRb SINE MIR 6 255 -13 6 755 679 250 72 18 chrX 22379259 22379426 -144270870 - B3A SINE B2 -18 180 5 6 755 491 251 16 29 chrX 22379537 22379661 -144270635 + B1F2 SINE Alu 2 132 -17 6 755 351 0 0 0 chrX 22380005 22380044 -144270252 + (T)n Simple_repeat Simple_repeat 1 39 0 6 755 287 265 77 88 chrX 22380483 22380665 -144269631 + L1MC4 LINE L1 7191 7370 -672 6 755 423 230 0 48 chrX 22380916 22381021 -144269275 - B3 SINE B2 0 216 117 6 755 868 132 28 0 chrX 22381059 22381203 -144269093 + B1_Mur3 SINE Alu 2 149 0 6 755 662 268 16 68 chrX 22381288 22381480 -144268816 - B3A SINE B2 -6 192 11 6 755 599 316 25 0 chrX 22383090 22383248 -144267048 + ID_B1 SINE B4 6 167 -57 6 755 4235 77 4 5 chrX 22383605 22384168 -144266128 - L1_Mus1 LINE L1 -1 6566 6005 6 755 363 73 55 0 chrX 22384168 22384223 -144266073 + L1_Mus1 LINE L1 5940 5997 -570 6 755 1986 275 65 21 chrX 22385021 22385679 -144264617 - Lx8 LINE L1 -2 7471 6785 6 755 1061 225 10 0 chrX 22385968 22386177 -144264119 - B3 SINE B2 -5 211 1 6 755 509 278 66 51 chrX 22386572 22386769 -144263527 + MLT1D LTR MaLR 1 200 -305 6 755 251 54 0 98 chrX 22386857 22386898 -144263398 - MT2A LTR ERVL 0 533 497 6 755 1228 197 56 49 chrX 22386961 22386998 -144263298 - MT2A LTR ERVL -233 300 254 6 755 1162 62 7 0 chrX 22386998 22387143 -144263153 + B1_Mus1 SINE Alu 2 147 -1 6 755 1228 197 56 49 chrX 22387143 22387393 -144262903 - MT2A LTR ERVL -280 253 11 6 755 278 233 55 0 chrX 22387454 22387527 -144262769 + MLT1D LTR MaLR 390 466 -39 6 755 586 281 14 0 chrX 22387578 22387724 -144262572 + B1_Mur1 SINE Alu 2 149 0 6 755 1346 161 4 9 chrX 22387757 22387983 -144262313 + URR1A DNA MER1_type 1 225 -1 6 755 582 54 129 0 chrX 22388258 22388351 -144261945 - L1_Mus2 LINE L1 -1 6565 6461 6 755 484 231 14 11 chrX 22388707 22388826 -144261470 + B3A SINE B2 1 116 -79 6 755 651 262 33 33 chrX 22388921 22389134 -144261162 + B3 SINE B2 4 216 0 6 755 511 280 7 7 chrX 22389174 22389318 -144260978 + B1_Mur1 SINE Alu 5 148 -1 6 755 12033 70 6 4 chrX 22391147 22392900 -144257396 - L1Md_F2 LINE L1 -636 5948 4192 6 755 5186 55 2 0 chrX 22392900 22393542 -144256754 + L1Md_F2 LINE L1 5936 6578 -4 6 755 262 286 28 101 chrX 22393587 22393696 -144256600 + MT2B LTR ERVL 152 252 -349 6 755 668 209 7 15 chrX 22393609 22393745 -144256551 + B1_Mur4 SINE Alu 14 148 -2 6 755 186 317 107 24 chrX 22394120 22394204 -144256092 + L2c LINE L2 3296 3386 -1 7 755 311 127 16 0 chrX 22394480 22394543 -144255753 + (TC)n Simple_repeat Simple_repeat 1 64 0 7 755 297 0 0 0 chrX 22394543 22394576 -144255720 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 755 281 47 0 23 chrX 22395145 22395189 -144255107 + (TTTTTG)n Simple_repeat Simple_repeat 2 44 0 7 755 929 255 26 5 chrX 22395259 22395452 -144254844 - B3 SINE B2 -6 210 14 7 755 231 338 0 75 chrX 22395460 22395540 -144254756 - ID4_ SINE ID 0 83 10 7 755 292 283 89 20 chrX 22395561 22395662 -144254634 - B1F SINE Alu -5 144 37 7 755 1833 173 24 24 chrX 22397097 22397470 -144252826 + ORR1D1 LTR MaLR 1 373 -1 7 755 3915 195 73 11 chrX 22398391 22399259 -144251037 - Lx5 LINE L1 0 7050 6130 7 755 252 0 0 0 chrX 22399864 22399892 -144250404 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 7 755 1160 160 0 31 chrX 22399892 22400118 -144250178 - Lx LINE L1 -34 6620 6402 7 755 597 374 77 10 chrX 22400190 22400490 -144249806 - MLT1A LTR MaLR -34 340 21 7 755 1350 148 49 4 chrX 22400623 22400867 -144249429 + L1VL1 LINE L1 12 266 -6156 7 755 14154 101 11 6 chrX 22400867 22403911 -144246385 + L1Md_F LINE L1 277 3334 -2549 7 755 243 373 35 50 chrX 22404128 22404269 -144246027 + MIR3 SINE MIR 7 145 -63 7 755 229 222 96 14 chrX 22404298 22404371 -144245925 + Charlie15a DNA MER1_type 128 206 -18 7 755 242 127 0 53 chrX 22404424 22404499 -144245797 + (TA)n Simple_repeat Simple_repeat 1 71 0 7 755 2348 74 6 61 chrX 22405165 22405511 -144244785 - ORR1A2 LTR MaLR 0 327 1 7 755 186 43 0 0 chrX 22405966 22405989 -144244307 + (T)n Simple_repeat Simple_repeat 1 23 0 7 755 919 148 0 34 chrX 22406201 22406348 -144243948 - B1_Mur4 SINE Alu 0 150 9 7 755 554 255 117 0 chrX 22406589 22406734 -144243562 + B3 SINE B2 49 210 -6 7 755 369 246 0 49 chrX 22407309 22407431 -144242865 + B1_Mur2 SINE Alu 35 147 -2 7 755 205 390 13 0 chrX 22408192 22408269 -144242027 + L2b LINE L2 3234 3311 -64 7 755 376 341 95 17 chrX 22408688 22408867 -144241429 - L2a LINE L2 -20 3406 3214 7 755 1660 166 73 48 chrX 22408877 22409079 -144241217 + RMER17C LTR ERVK 2 215 -195 7 755 657 86 0 0 chrX 22409079 22409172 -144241124 + (TC)n Simple_repeat Simple_repeat 2 94 0 7 755 1660 166 73 48 chrX 22409172 22409368 -144240928 + RMER17C LTR ERVK 216 410 0 7 755 180 111 0 0 chrX 22410995 22411022 -144239274 + (T)n Simple_repeat Simple_repeat 1 27 0 7 755 537 201 134 37 chrX 22411235 22411369 -144238927 + B1_Mur2 SINE Alu 1 147 -2 7 755 386 223 211 18 chrX 22411454 22411568 -144238728 - B1_Mur2 SINE Alu -2 147 12 7 755 592 198 9 0 chrX 22411843 22411949 -144238347 - B3 SINE B2 -109 107 1 7 755 373 295 88 69 chrX 22411949 22412098 -144238198 - B4 SINE B4 -61 231 80 7 755 628 261 7 21 chrX 22412280 22412421 -144237875 - B1_Mur2 SINE Alu -1 148 10 7 755 433 152 82 52 chrX 22412652 22412749 -144237547 - B1_Mur4 SINE Alu -1 149 50 7 755 339 25 0 0 chrX 22413012 22413052 -144237244 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 755 396 0 0 0 chrX 22413052 22413095 -144237201 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 756 367 281 20 50 chrX 22413322 22413423 -144236873 - B4A SINE B4 -184 108 11 7 756 688 241 82 34 chrX 22413987 22414193 -144236103 - RMER15 LTR ERVL -13 562 347 7 756 666 284 5 64 chrX 22414593 22414796 -144235500 + B3 SINE B2 26 216 0 7 756 21 0 0 0 chrX 22415164 22415185 -144235111 + AT_rich Low_complexity Low_complexity 1 21 0 7 756 722 253 25 65 chrX 22415628 22415642 -144234654 - B3A SINE B2 -7 191 183 7 756 207 125 0 0 chrX 22415642 22415682 -144234614 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 756 883 222 12 19 chrX 22415682 22415866 -144234430 - B3 SINE B2 -16 182 1 7 756 1231 124 3 126 chrX 22417581 22417867 -144232429 - Lx3B LINE L1 0 6973 6723 7 756 329 85 0 0 chrX 22418053 22418100 -144232196 - ORR1A4 LTR MaLR -8 318 272 7 756 542 80 0 0 chrX 22418124 22418199 -144232097 - B1_Mus2 SINE Alu 0 147 73 7 756 1703 106 23 57 chrX 22418194 22418494 -144231802 - ORR1A4 LTR MaLR -39 290 1 7 756 488 180 128 20 chrX 22418567 22418669 -144231627 - PB1D9 SINE Alu -1 119 7 7 756 2671 65 3 17 chrX 22418669 22419028 -144231268 + MTA_Mm LTR MaLR 1 354 -42 7 756 2969 18 3 0 chrX 22419028 22419364 -144230932 - IAPLTR1a_Mm LTR ERVK 0 337 1 7 756 7892 19 2 0 chrX 22419364 22420295 -144230001 - IAPEz-int LTR ERVK 0 6481 5549 7 756 479 49 136 0 chrX 22420289 22420370 -144229926 - IAPEz-int LTR ERVK -6382 99 8 7 756 2969 18 3 0 chrX 22420370 22420706 -144229590 - IAPLTR1a_Mm LTR ERVK 0 337 1 7 756 410 21 0 0 chrX 22420706 22420754 -144229542 + MTA_Mm LTR MaLR 353 400 0 7 756 7331 79 30 28 chrX 22420754 22421130 -144229166 + MTA_Mm-int LTR MaLR 1 379 -719 7 756 6682 69 3 2 chrX 22421130 22421998 -144228298 + L1Md_F2 LINE L1 5704 6572 -10 7 756 7331 79 30 28 chrX 22421998 22422717 -144227579 + MTA_Mm-int LTR MaLR 380 1098 0 7 756 2986 76 5 8 chrX 22422717 22423114 -144227182 + MTA_Mm LTR MaLR 1 396 0 7 756 575 286 121 0 chrX 22423142 22423324 -144226972 - B3 SINE B2 -12 204 1 7 756 478 287 77 8 chrX 22423468 22423598 -144226698 + B1_Mur2 SINE Alu 10 148 -1 7 756 23 0 0 0 chrX 22423765 22423788 -144226508 + AT_rich Low_complexity Low_complexity 1 23 0 7 756 835 138 0 21 chrX 22424014 22424155 -144226141 + B1_Mus2 SINE Alu 9 146 -1 7 756 666 95 0 0 chrX 22424186 22424281 -144226015 + (CAAG)n Simple_repeat Simple_repeat 1 95 0 7 756 223 271 0 0 chrX 22424425 22424484 -144225812 + GA-rich Low_complexity Low_complexity 1 59 0 7 756 278 296 102 48 chrX 22424705 22424828 -144225468 - L1MEc LINE L1 -5281 1119 995 7 756 882 278 0 0 chrX 22424828 22425040 -144225256 - B3 SINE B2 -4 212 1 7 756 278 296 102 48 chrX 22425040 22425250 -144225046 - L1MEc LINE L1 -5406 994 768 7 756 342 347 50 10 chrX 22425489 22425690 -144224606 - L1MEc LINE L1 -5943 457 249 7 756 238 308 9 9 chrX 22425708 22425813 -144224483 - L1MEc LINE L1 -6260 140 36 7 756 1312 239 84 40 chrX 22425896 22426397 -144223899 + Lx9 LINE L1 7102 7624 -20 7 756 897 259 35 0 chrX 22426454 22426655 -144223641 - B3 SINE B2 -6 210 3 7 756 281 281 41 10 chrX 22427041 22427138 -144223158 - MIRc SINE MIR -144 124 25 7 756 399 211 0 0 chrX 22428260 22428355 -144221941 + (TA)n Simple_repeat Simple_repeat 2 96 0 7 756 851 219 73 19 chrX 22428643 22428848 -144221448 + B3 SINE B2 1 216 0 7 756 255 282 26 26 chrX 22428952 22429065 -144221231 - Lx8 LINE L1 -6 7467 7355 7 756 276 120 0 0 chrX 22429068 22429118 -144221178 + (A)n Simple_repeat Simple_repeat 1 50 0 7 756 809 259 29 25 chrX 22429118 22429356 -144220940 - Lx8 LINE L1 -149 7324 7086 7 756 961 292 148 78 chrX 22429449 22429491 -144220805 - MLT1D LTR MaLR 0 505 474 7 756 4563 78 8 0 chrX 22429491 22430103 -144220193 + Lx3_Mus LINE L1 6391 7007 -2 7 756 961 292 148 78 chrX 22430103 22430532 -144219764 - MLT1D LTR MaLR -32 473 1 7 756 572 244 17 0 chrX 22430633 22430748 -144219548 - B3 SINE B2 -98 118 2 7 756 1214 236 94 34 chrX 22430861 22431243 -144219053 + MTD LTR MaLR 2 406 -13 7 756 1926 205 73 45 chrX 22431265 22431688 -144218608 - RLTR41 LTR ERV1 0 446 12 7 756 21 57 0 0 chrX 22432549 22432584 -144217712 + AT_rich Low_complexity Low_complexity 1 35 0 7 756 954 277 48 42 chrX 22433011 22433343 -144216953 + Lx7 LINE L1 6962 7295 -401 7 756 318 87 0 0 chrX 22433354 22433400 -144216896 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 756 188 244 0 0 chrX 22433700 22433741 -144216555 + L2a LINE L2 3365 3405 -21 7 756 219 69 0 0 chrX 22434817 22434846 -144215450 + (TTG)n Simple_repeat Simple_repeat 2 30 0 7 756 507 268 0 18 chrX 22434846 22434960 -144215336 - B1_Mur1 SINE Alu -10 139 28 7 756 4293 80 5 2 chrX 22434960 22435833 -144214463 - L1_Mus2 LINE L1 -377 6189 5315 7 756 749 301 88 18 chrX 22436031 22436143 -144214153 + Lx8 LINE L1 7100 7212 -261 7 756 539 15 15 0 chrX 22436143 22436211 -144214085 + (GA)n Simple_repeat Simple_repeat 2 70 0 7 756 749 301 88 18 chrX 22436211 22436439 -144213857 + Lx8 LINE L1 7213 7464 -9 7 756 4857 46 10 19 chrX 22436593 22437233 -144213063 + L1Md_F2 LINE L1 5967 6582 0 7 756 796 189 15 0 chrX 22438890 22439022 -144211274 + B1_Mus1 SINE Alu 8 141 -7 7 756 766 69 0 29 chrX 22439061 22439166 -144211130 + U6 snRNA snRNA 1 102 -5 7 756 587 238 29 70 chrX 22440129 22440301 -144209995 - ORR1D2 LTR MaLR 0 370 206 7 756 1077 95 0 0 chrX 22440301 22440449 -144209847 + B1_Mus1 SINE Alu 1 148 0 7 756 263 163 20 0 chrX 22440454 22440503 -144209793 - ORR1D2 LTR MaLR -153 217 168 7 756 295 54 0 0 chrX 22440498 22440535 -144209761 - ORR1D2 LTR MaLR -326 44 8 7 756 244 294 15 0 chrX 22441210 22441278 -144209018 - L2a LINE L2 -3 3423 3355 7 756 232 286 10 10 chrX 22441488 22441587 -144208709 + L1MC LINE L1 5676 5774 -2108 7 756 817 290 45 8 chrX 22441699 22441946 -144208350 + MLT1D LTR MaLR 250 505 0 7 756 248 301 28 58 chrX 22442611 22442737 -144207559 + MIR SINE MIR 18 141 -127 7 756 192 77 0 0 chrX 22443873 22443899 -144206397 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 7 756 23 0 0 0 chrX 22445401 22445424 -144204872 + AT_rich Low_complexity Low_complexity 1 23 0 7 756 416 35 17 0 chrX 22445438 22445496 -144204800 + (GA)n Simple_repeat Simple_repeat 1 59 0 7 756 928 244 15 0 chrX 22445814 22446019 -144204277 - B3 SINE B2 0 216 9 7 756 521 311 8 0 chrX 22449257 22449389 -144200907 - RSINE1 SINE B4 -17 148 16 7 756 3194 111 3 100 chrX 22449421 22450002 -144200294 + Lx2A LINE L1 6483 7007 -1 7 756 309 151 0 0 chrX 22450003 22450056 -144200240 + A-rich Low_complexity Low_complexity 1 53 0 7 756 4123 55 0 2 chrX 22450237 22450751 -144199545 - L1Md_F2 LINE L1 -5 6577 6065 7 756 195 369 19 19 chrX 22450943 22451048 -144199248 + L2b LINE L2 3270 3374 -1 7 756 2229 85 25 21 chrX 22451209 22451535 -144198761 - IAPLTR2b LTR ERVK 0 327 1 7 756 4200 43 6 0 chrX 22451537 22452073 -144198223 - IAPEz-int LTR ERVK -2 6479 5941 7 756 37402 33 0 0 chrX 22452073 22457486 -144192810 - L1Md_T LINE L1 0 6582 1170 7 756 5186 176 20 26 chrX 22457492 22458966 -144191330 - L1Md_T LINE L1 -5411 1205 99 7 756 1642 42 0 40 chrX 22458966 22459189 -144191107 - IAPEz-int LTR ERVK -532 5949 5736 7 756 2164 58 0 0 chrX 22459188 22459466 -144190830 - IAPEz-int LTR ERVK -4845 1636 1359 7 756 3666 59 2 18 chrX 22459466 22459969 -144190327 - IAPEz-int LTR ERVK -5819 662 168 7 756 240 327 0 0 chrX 22459969 22460024 -144190272 - RLTR27 LTR ERVK -34 275 221 7 756 229 267 0 0 chrX 22460050 22460095 -144190201 - RLTR27 LTR ERVK -34 275 231 7 756 511 161 25 51 chrX 22460095 22460213 -144190083 - IAPEz-int LTR ERVK -6358 123 9 7 756 2243 82 25 21 chrX 22460214 22460540 -144189756 - IAPLTR2b LTR ERVK 0 327 1 7 756 186 350 39 29 chrX 22460549 22460652 -144189644 + L2 LINE L2 2715 2818 -601 7 756 13489 94 7 1 chrX 22460851 22462928 -144187368 + L1Md_F2 LINE L1 1234 3323 -2560 8 756 6995 76 2 3 chrX 22462922 22464114 -144186182 + L1Md_F2 LINE L1 5370 6559 -23 8 756 14883 88 12 84 chrX 22464128 22466719 -144183577 + L1Md_F2 LINE L1 3183 5585 -298 8 756 7269 88 3 4 chrX 22466720 22467717 -144182579 + L1Md_F2 LINE L1 5587 6582 0 8 756 8136 95 15 3 chrX 22467717 22468950 -144181346 + L1Md_F2 LINE L1 4339 5585 -298 8 756 7563 71 2 2 chrX 22468951 22469935 -144180361 + L1Md_F2 LINE L1 5587 6570 -12 8 756 485 102 0 84 chrX 22469944 22470051 -144180245 + RLTR19-int LTR ERVK 2211 2308 -3829 8 756 517 80 0 11 chrX 22470071 22470159 -144180137 - L1Md_F2 LINE L1 -13 6569 6483 8 756 891 119 12 124 chrX 22470249 22470498 -144179798 - RLTR19-int LTR ERVK -4070 2067 1847 8 756 969 161 95 18 chrX 22470506 22470727 -144179569 - RLTR19-int LTR ERVK -4498 1639 1402 8 756 394 374 42 12 chrX 22471308 22471473 -144178823 - MIRb SINE MIR -64 204 35 8 756 181 30 59 29 chrX 22471501 22471535 -144178761 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 8 756 221 178 22 0 chrX 22471542 22471587 -144178709 + (TTG)n Simple_repeat Simple_repeat 2 47 0 8 756 1563 157 131 30 chrX 22471604 22471925 -144178371 + ORR1B1 LTR MaLR 1 336 -58 8 756 862 25 17 0 chrX 22471927 22472046 -144178250 + L1Md_F2 LINE L1 6442 6562 -20 8 756 513 0 0 0 chrX 22472046 22472103 -144178193 + (TA)n Simple_repeat Simple_repeat 1 57 0 8 756 565 89 31 31 chrX 22472111 22472238 -144178058 + L1_Mus4 LINE L1 6510 6636 0 8 756 244 195 0 0 chrX 22472238 22472279 -144178017 + ORR1B1 LTR MaLR 324 364 -14 8 756 2656 85 0 16 chrX 22472279 22472650 -144177646 + L1Md_F2 LINE L1 6206 6570 -12 8 756 721 266 6 31 chrX 22472662 22472821 -144177475 - B3 SINE B2 -61 155 1 8 756 216 0 0 0 chrX 22472998 22473022 -144177274 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 8 756 269 295 37 33 chrX 22473078 22473323 -144176973 + RMER17D2 LTR ERVK 208 453 -356 8 756 601 336 39 18 chrX 22473418 22473697 -144176599 - Lx7 LINE L1 -587 7109 6825 8 756 428 254 109 11 chrX 22473960 22474143 -144176153 + L1ME2 LINE L1 5787 5987 -177 8 756 842 175 13 7 chrX 22474463 22474618 -144175678 - URR1B DNA MER1_type 0 225 70 8 756 338 312 36 9 chrX 22474752 22474862 -144175434 + MER20 DNA MER1_type 102 214 -5 8 756 180 361 40 30 chrX 22475962 22476062 -144174234 + MIR3 SINE MIR 57 157 -51 8 756 1349 85 5 23 chrX 22477367 22477583 -144172713 - L1_Mus2 LINE L1 -429 5454 5243 8 756 7250 77 2 1 chrX 22477581 22478639 -144171657 + L1_Mus2 LINE L1 5506 6564 -2 8 756 603 147 0 0 chrX 22478647 22478749 -144171547 + (GAAA)n Simple_repeat Simple_repeat 2 103 0 8 756 267 192 38 25 chrX 22479887 22479967 -144170329 + (TCTCTG)n Simple_repeat Simple_repeat 4 84 0 8 756 946 187 9 22 chrX 22479981 22480211 -144170085 - L1_Mur3 LINE L1 -2894 2983 2757 8 756 1490 147 97 18 chrX 22480223 22480562 -144169734 - L1_Mur3 LINE L1 -2995 2885 2520 8 756 2244 262 17 6 chrX 22480712 22481245 -144169051 + Lx5 LINE L1 6503 7041 -9 8 756 2647 169 60 3 chrX 22481291 22481895 -144168401 - L1_Mur3 LINE L1 -3378 2502 1865 8 756 451 267 76 8 chrX 22482255 22482387 -144167909 + B1_Mur3 SINE Alu 1 141 -8 8 756 758 240 78 0 chrX 22483614 22483806 -144166490 + B3 SINE B2 3 209 -7 8 756 489 17 0 0 chrX 22484484 22484542 -144165754 + (CA)n Simple_repeat Simple_repeat 1 58 0 8 756 387 0 0 0 chrX 22484542 22484584 -144165712 + (GA)n Simple_repeat Simple_repeat 2 44 0 8 756 936 330 55 0 chrX 22484592 22484865 -144165431 + B4A SINE B4 1 288 -4 8 756 260 336 33 41 chrX 22485370 22485491 -144164805 - MIRb SINE MIR -39 229 110 8 756 879 71 0 0 chrX 22485675 22485788 -144164508 + B1_Mm SINE Alu 35 147 0 8 756 3156 112 7 54 chrX 22486565 22486584 -144163712 + L1VL4 LINE L1 190 208 -6094 8 756 2726 70 9 0 chrX 22486584 22486927 -144163369 - ORR1A1 LTR MaLR 0 346 1 8 756 3156 112 7 54 chrX 22486927 22487429 -144162867 + L1VL4 LINE L1 209 692 -5610 8 756 3662 125 28 101 chrX 22487429 22488239 -144162057 - RMER17A LTR ERVK 0 751 1 8 756 3156 112 7 54 chrX 22488239 22488272 -144162024 + L1VL4 LINE L1 693 719 -5583 8 756 950 248 12 29 chrX 22488276 22488521 -144161775 + Lx9 LINE L1 6485 6725 -919 8 756 7257 81 16 2 chrX 22488690 22490366 -144159930 - L1_Mus1 LINE L1 -1 6566 4878 8 756 1132 310 85 51 chrX 22490392 22491017 -144159279 - RMER13A LTR ERVK -214 646 1 8 756 2960 226 31 49 chrX 22491018 22491924 -144158372 + Lx9 LINE L1 6716 7605 -39 8 756 2895 82 64 32 chrX 22491925 22492363 -144157933 + L1Md_F2 LINE L1 6123 6574 -8 8 756 22 0 0 0 chrX 22492434 22492456 -144157840 + AT_rich Low_complexity Low_complexity 1 22 0 8 756 1249 27 0 13 chrX 22492701 22492850 -144157446 + B1_Mm SINE Alu 1 147 0 8 756 195 42 0 0 chrX 22492850 22492874 -144157422 + (A)n Simple_repeat Simple_repeat 1 24 0 8 756 307 347 46 46 chrX 22492997 22493172 -144157124 - MIR SINE MIR -58 210 31 8 756 669 324 21 11 chrX 22493234 22493421 -144156875 + B4 SINE B4 28 216 -76 8 756 440 289 47 59 chrX 22493619 22493788 -144156508 + MER5A DNA MER1_type 1 167 -22 8 756 651 238 22 100 chrX 22493800 22494029 -144156267 - B3 SINE B2 -5 211 1 8 756 208 216 0 0 chrX 22494033 22494070 -144156226 + MER5A DNA MER1_type 153 189 0 8 756 27910 103 23 3 chrX 22494668 22498002 -144152294 - L1_Mus1 LINE L1 0 6567 3141 8 756 216 0 0 0 chrX 22498002 22498026 -144152270 + (TTTG)n Simple_repeat Simple_repeat 4 27 0 8 756 27910 113 23 3 chrX 22498026 22500000 -144150296 - L1_Mus1 LINE L1 -2743 3140 1149 8 756 4169 194 50 9 chrX 22500000 22500873 -144149423 - L1Md_F LINE L1 -5486 1033 125 1 756 409 115 15 62 chrX 22500964 22501094 -144149202 + (TCTCTG)n Simple_repeat Simple_repeat 6 129 0 2 756 600 311 72 16 chrX 22501108 22501141 -144149155 - B3 SINE B2 -7 209 167 3 756 405 0 0 0 chrX 22501141 22501186 -144149110 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 756 600 311 72 16 chrX 22501186 22501345 -144148951 - B3 SINE B2 -50 166 7 3 756 227 254 18 0 chrX 22501391 22501446 -144148850 - RMER15 LTR ERVL -117 458 403 5 756 863 293 120 12 chrX 22501498 22501823 -144148473 - Lx8 LINE L1 -253 7220 6861 6 756 648 0 0 0 chrX 22501945 22502017 -144148279 + (TTC)n Simple_repeat Simple_repeat 2 73 0 7 756 1090 66 0 0 chrX 22502017 22502153 -144148143 - B1_Mus1 SINE Alu -10 138 3 8 756 404 294 23 45 chrX 22502373 22502505 -144147791 + RSINE1 SINE B4 9 137 -28 9 756 282 317 59 0 chrX 22503157 22503258 -144147038 - Tigger15a DNA TcMar -148 567 461 1 756 331 337 9 95 chrX 22503764 22504079 -144146217 + B4A SINE B4 1 288 -4 1 756 272 270 10 29 chrX 22504083 22504186 -144146110 + (CATA)n Simple_repeat Simple_repeat 3 103 0 1 756 27 29 0 0 chrX 22504193 22504227 -144146069 + AT_rich Low_complexity Low_complexity 1 34 0 1 756 196 288 34 0 chrX 22504618 22504677 -144145619 + L2a LINE L2 3366 3426 0 1 756 683 264 86 50 chrX 22505781 22506177 -144144119 + L1MA8 LINE L1 5160 5555 -736 1 756 971 200 115 0 chrX 22506177 22506377 -144143919 - URR1A DNA MER1_type -1 225 3 1 756 683 291 42 73 chrX 22506377 22506561 -144143735 + L1MA8 LINE L1 5556 5752 -539 1 756 5167 180 40 22 chrX 22506686 22507049 -144143247 + Lx7 LINE L1 4813 5191 -689 1 756 461 160 480 0 chrX 22507049 22507174 -144143122 - B2_Mm2 SINE B2 -9 186 2 1 756 5167 197 39 19 chrX 22507174 22508260 -144142036 + Lx7 LINE L1 5192 6306 -1390 1 756 717 243 34 0 chrX 22508264 22508412 -144141884 + Lx7 LINE L1 6536 6688 -1008 1 756 334 323 47 23 chrX 22508440 22508465 -144141831 - CYRA11_Mm Unknown Y-chromosome -278 339 212 1 756 785 152 7 7 chrX 22508465 22508604 -144141692 + URR1B DNA MER1_type 87 225 0 2 756 654 182 86 49 chrX 22508624 22508751 -144141545 + Lx7 LINE L1 6771 6892 -804 1 756 536 0 16 0 chrX 22508751 22508815 -144141481 + (GA)n Simple_repeat Simple_repeat 2 66 0 2 756 654 182 86 49 chrX 22508815 22508849 -144141447 + Lx7 LINE L1 6893 6937 -759 1 756 386 225 9 0 chrX 22508911 22509022 -144141274 + (TA)n Simple_repeat Simple_repeat 1 112 0 2 756 648 231 97 103 chrX 22509026 22509345 -144140951 + Lx7 LINE L1 7380 7696 0 1 756 268 226 206 0 chrX 22509363 22509518 -144140778 + L1MA8 LINE L1 6052 6238 -53 1 756 659 174 8 0 chrX 22509592 22509713 -144140583 + ORR1D1 LTR MaLR 1 122 -252 2 756 2954 201 38 101 chrX 22509942 22510838 -144139458 + L1VL2 LINE L1 1 767 -5568 2 756 8646 141 16 2 chrX 22510836 22513105 -144137191 + Lx LINE L1 4343 6638 -16 2 756 2290 90 29 38 chrX 22513106 22513451 -144136845 + L1Md_F2 LINE L1 6229 6570 -12 2 756 308 239 33 22 chrX 22513467 22513557 -144136739 - Lx9 LINE L1 -798 6846 6756 2 756 292 191 143 0 chrX 22513556 22513619 -144136677 - Lx9 LINE L1 -1033 6611 6540 2 756 1422 211 71 74 chrX 22513619 22513998 -144136298 - ORR1C2 LTR MaLR 0 384 7 2 756 768 270 5 36 chrX 22514021 22514102 -144136194 - Lx9 LINE L1 -1114 6530 6453 2 756 7000 68 7 2 chrX 22514102 22514991 -144135305 + RLTR13B1 LTR ERVK 1 893 0 2 756 768 270 5 36 chrX 22514991 22515128 -144135168 - Lx9 LINE L1 -1192 6452 6319 2 756 226 292 15 30 chrX 22516035 22516102 -144134194 - L2b LINE L2 -7 3368 3303 3 756 1430 191 142 9 chrX 22516742 22517081 -144133215 - ORR1C2 LTR MaLR 0 384 1 3 756 984 72 0 0 chrX 22517133 22517272 -144133024 - MT-int LTR MaLR -908 190 52 3 756 6835 58 7 6 chrX 22517273 22518184 -144132112 + MTA_Mm-int LTR MaLR 187 1098 0 3 756 2980 66 5 10 chrX 22518184 22518582 -144131714 + MTA_Mm LTR MaLR 1 396 0 3 756 206 266 16 0 chrX 22518741 22518805 -144131491 + (TA)n Simple_repeat Simple_repeat 2 66 0 3 756 21 0 0 0 chrX 22519015 22519036 -144131260 + AT_rich Low_complexity Low_complexity 1 21 0 3 756 627 302 0 19 chrX 22519047 22519209 -144131087 + RSINE1 SINE B4 5 163 -2 3 756 1170 291 125 23 chrX 22519311 22520222 -144130074 + L1M2 LINE L1 4671 5650 -197 3 756 356 208 10 0 chrX 22521026 22521122 -144129174 + (TCTA)n Simple_repeat Simple_repeat 3 99 0 3 756 330 294 29 0 chrX 22521147 22521215 -144129081 - PB1D9 SINE Alu -50 70 1 3 756 23 0 0 0 chrX 22521398 22521421 -144128875 + AT_rich Low_complexity Low_complexity 1 23 0 4 756 402 21 0 0 chrX 22521509 22521556 -144128740 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 756 1209 295 92 21 chrX 22521607 22522313 -144127983 - L1MA6 LINE L1 -159 6141 5386 4 756 759 240 33 133 chrX 22522432 22522672 -144127624 + B3 SINE B2 1 216 0 4 756 416 267 8 8 chrX 22522680 22522801 -144127495 + L1M2 LINE L1 3329 3449 -2694 4 756 2055 163 67 25 chrX 22522863 22523265 -144127031 - MTC LTR MaLR -2 419 1 4 756 399 21 0 0 chrX 22523425 22523473 -144126823 + (GA)n Simple_repeat Simple_repeat 2 49 0 4 756 810 210 191 11 chrX 22523870 22524053 -144126243 - B3 SINE B2 0 216 1 4 756 21 36 0 0 chrX 22524105 22524133 -144126163 + AT_rich Low_complexity Low_complexity 1 28 0 4 756 279 0 0 0 chrX 22524309 22524340 -144125956 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 756 639 288 0 32 chrX 22525002 22525160 -144125136 - RSINE1 SINE B4 -11 154 2 5 756 219 229 56 78 chrX 22525438 22525528 -144124768 + L2a LINE L2 3308 3395 -31 5 756 990 232 19 0 chrX 22525898 22526105 -144124191 - B3 SINE B2 -5 211 1 5 756 186 50 49 24 chrX 22526278 22526319 -144123977 + (TAAAA)n Simple_repeat Simple_repeat 2 43 0 5 756 699 307 55 9 chrX 22526931 22527148 -144123148 + B4A SINE B4 3 229 -63 5 756 1163 55 14 0 chrX 22527148 22527294 -144123002 + B1_Mus1 SINE Alu 1 148 0 5 756 307 0 0 44 chrX 22527294 22527339 -144122957 + (CAAAAA)n Simple_repeat Simple_repeat 6 48 0 5 756 404 250 0 0 chrX 22527345 22527421 -144122875 + B4A SINE B4 217 292 0 5 756 378 323 45 13 chrX 22527467 22527624 -144122672 + RSINE1 SINE B4 4 165 0 5 756 375 261 0 0 chrX 22527624 22527785 -144122511 + (CA)n Simple_repeat Simple_repeat 1 161 0 5 756 24 32 0 0 chrX 22527801 22527832 -144122464 + AT_rich Low_complexity Low_complexity 1 31 0 5 756 309 335 140 42 chrX 22528561 22528947 -144121349 - L1MC4a LINE L1 -1835 6047 5624 6 756 261 364 67 0 chrX 22529018 22529183 -144121113 - L2 LINE L2 -774 2645 2470 6 756 1120 106 17 11 chrX 22529618 22529799 -144120497 + L1Md_F2 LINE L1 6401 6582 0 6 756 555 290 14 14 chrX 22530400 22530547 -144119749 - B1_Mur1 SINE Alu -1 148 2 6 756 230 298 18 0 chrX 22530713 22530770 -144119526 + Lx8 LINE L1 6279 6336 -1137 6 756 675 216 132 47 chrX 22532364 22532554 -144117742 - ORR1D1 LTR MaLR 0 374 169 6 756 292 314 65 26 chrX 22533330 22533485 -144116811 + L2a LINE L2 3220 3395 -31 6 756 189 0 0 0 chrX 22533606 22533627 -144116669 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 756 405 176 45 67 chrX 22533860 22533994 -144116302 + L1M5 LINE L1 3886 4016 -2130 6 756 418 211 31 15 chrX 22534199 22534315 -144115981 + B3A SINE B2 1 115 -80 6 756 1022 126 12 12 chrX 22534514 22534683 -144115613 + URR1A DNA MER1_type 58 226 0 7 756 567 103 0 0 chrX 22535650 22535747 -144114549 + (TC)n Simple_repeat Simple_repeat 2 98 0 7 756 23 0 0 0 chrX 22535816 22535839 -144114457 + AT_rich Low_complexity Low_complexity 1 23 0 7 756 25 0 0 0 chrX 22536182 22536207 -144114089 + AT_rich Low_complexity Low_complexity 1 25 0 7 756 1059 179 57 24 chrX 22537000 22537212 -144113084 + URR1B DNA MER1_type 7 225 0 7 756 292 105 35 17 chrX 22537820 22537878 -144112418 + CT-rich Low_complexity Low_complexity 3 61 0 7 756 207 170 0 0 chrX 22537908 22537955 -144112341 + (TCTCTG)n Simple_repeat Simple_repeat 4 50 0 7 756 491 297 96 57 chrX 22538452 22538978 -144111318 + L1MB4 LINE L1 718 1145 -5821 7 756 555 297 160 66 chrX 22538980 22539510 -144110786 + L1M4c LINE L1 914 1493 -4891 7 756 1647 216 71 6 chrX 22539510 22539874 -144110422 + MTC LTR MaLR 1 388 -33 7 756 711 241 101 15 chrX 22539902 22540100 -144110196 + B3 SINE B2 1 215 -1 8 756 1029 82 0 0 chrX 22540218 22540352 -144109944 + B1_Mus1 SINE Alu 1 134 -14 8 756 915 36 0 0 chrX 22540354 22540465 -144109831 + (GGAGAA)n Simple_repeat Simple_repeat 5 115 0 8 756 340 248 39 19 chrX 22540478 22540581 -144109715 + L1M4c LINE L1 1591 1695 -4689 7 756 745 205 60 6 chrX 22540708 22540875 -144109421 - Lx5 LINE L1 -7 7043 6868 8 756 448 246 258 0 chrX 22540889 22541106 -144109190 + L1MB4 LINE L1 5691 5963 -217 8 756 22 0 0 0 chrX 22541342 22541364 -144108932 + AT_rich Low_complexity Low_complexity 1 22 0 8 756 228 301 0 117 chrX 22541960 22542054 -144108242 + B4 SINE B4 3 85 -207 8 756 1485 155 0 0 chrX 22542476 22542702 -144107594 + URR1A DNA MER1_type 1 226 0 8 756 22 35 0 0 chrX 22543126 22543155 -144107141 + AT_rich Low_complexity Low_complexity 1 29 0 8 756 5708 101 20 2 chrX 22543176 22543987 -144106309 - L1Md_F2 LINE L1 -10 6572 5748 8 756 837 21 0 0 chrX 22543987 22544081 -144106215 + L1Md_F3 LINE L1 5605 5698 -886 9 94 1407 254 60 42 chrX 22544116 22544519 -144105777 + RMER15 LTR ERVL 166 575 0 9 757 8778 5 11 3 chrX 22544691 22545679 -144104617 + L1Md_T LINE L1 5587 6582 0 9 757 618 298 0 0 chrX 22546245 22546386 -144103910 + RSINE1 SINE B4 5 145 -20 9 757 201 275 83 56 chrX 22547045 22547153 -144103143 + MIR SINE MIR 70 180 -82 9 757 438 20 0 0 chrX 22547656 22547707 -144102589 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 757 218 198 0 0 chrX 22547932 22547977 -144102319 + MIR SINE MIR 215 259 -9 9 757 585 0 0 0 chrX 22548982 22549047 -144101249 + (GA)n Simple_repeat Simple_repeat 2 66 0 9 757 225 0 0 0 chrX 22549109 22549134 -144101162 + (TG)n Simple_repeat Simple_repeat 2 26 0 9 757 442 274 19 52 chrX 22549615 22549769 -144100527 - RSINE1 SINE B4 -13 152 4 9 757 631 337 0 6 chrX 22549886 22550056 -144100240 - B3 SINE B2 -47 169 1 9 757 589 280 95 30 chrX 22550836 22551068 -144099228 + B4A SINE B4 2 248 -44 1 757 455 60 15 0 chrX 22551101 22551168 -144099128 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 757 354 61 0 0 chrX 22551407 22551456 -144098840 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 757 9641 123 42 9 chrX 22551865 22554162 -144096134 + L1VL2 LINE L1 80 2462 -1153 1 757 1895 87 58 20 chrX 22554162 22554456 -144095840 + ORR1A1 LTR MaLR 1 305 -41 1 757 14527 105 8 2 chrX 22554468 22557553 -144092743 + L1Md_F LINE L1 501 3623 -2260 1 757 33787 81 7 3 chrX 22557565 22563770 -144086526 + L1_Mus3 LINE L1 441 6632 -6 1 757 396 0 0 0 chrX 22563871 22563915 -144086381 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 757 3243 161 54 47 chrX 22564051 22564736 -144085560 - RMER6C LTR ERVK 0 690 1 1 757 1467 133 11 34 chrX 22565645 22565748 -144084548 + Lx3C LINE L1 6717 6816 -160 1 757 2891 63 60 5 chrX 22565748 22566147 -144084149 + BGLII LTR ERVK 1 421 0 1 757 1467 133 11 34 chrX 22566147 22566307 -144083989 + Lx3C LINE L1 6817 6974 -2 1 757 195 42 0 0 chrX 22566308 22566332 -144083964 + (GGAA)n Simple_repeat Simple_repeat 1 24 0 1 757 3043 62 2 35 chrX 22566552 22566953 -144083343 - RLTR10 LTR ERVK -2 388 1 1 757 8024 29 6 3 chrX 22566953 22567947 -144082349 - RLTR10-int LTR ERVK -1 1986 990 1 757 469 319 31 31 chrX 22568029 22568452 -144081844 - IAP-d-int LTR ERVK -5481 1061 738 1 757 5506 59 142 0 chrX 22568477 22569311 -144080985 - RLTR10-int LTR ERVK -995 992 41 1 757 3071 65 5 0 chrX 22569323 22569709 -144080587 - RLTR10 LTR ERVK -2 388 1 1 757 4767 50 22 5 chrX 22569795 22570398 -144079898 - L1Md_F2 LINE L1 -9 6573 5961 1 757 22 0 0 0 chrX 22570765 22570787 -144079509 + AT_rich Low_complexity Low_complexity 1 22 0 1 757 191 269 0 19 chrX 22570941 22570994 -144079302 + MIRc SINE MIR 166 217 -51 1 757 6666 94 42 0 chrX 22571855 22572792 -144077504 + RLTR13C1 LTR ERVK 1 976 -7 1 757 624 286 45 45 chrX 22573469 22573714 -144076582 - MTE2a LTR MaLR -6 373 129 1 757 1338 191 50 4 chrX 22573754 22574012 -144076284 + ORR1D1 LTR MaLR 1 270 -104 1 757 723 268 14 0 chrX 22574260 22574402 -144075894 + RSINE1 SINE B4 4 147 -18 1 757 360 94 0 0 chrX 22574407 22574460 -144075836 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 757 466 319 22 7 chrX 22574597 22574733 -144075563 - MLT1A LTR MaLR -233 141 4 1 757 22 0 0 0 chrX 22574786 22574808 -144075488 + AT_rich Low_complexity Low_complexity 1 22 0 1 757 1221 54 0 0 chrX 22575104 22575251 -144075045 + B1_Mm SINE Alu 1 147 0 1 757 468 0 0 0 chrX 22575573 22575625 -144074671 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 757 272 286 159 25 chrX 22576933 22577134 -144073162 - L1MC2 LINE L1 -10 6334 6107 1 757 226 349 16 0 chrX 22577202 22577265 -144073031 - ID4 SINE ID -18 65 2 1 757 547 259 50 23 chrX 22577270 22577491 -144072805 - L1MA9 LINE L1 -337 5963 5737 1 757 294 249 0 0 chrX 22577495 22577577 -144072719 + L1M3 LINE L1 5408 5489 -695 1 757 277 272 191 8 chrX 22577703 22577829 -144072467 + Lx8 LINE L1 7069 7217 -256 1 757 2522 125 62 7 chrX 22577855 22578274 -144072022 - BGLII_A LTR ERVK -3 442 1 1 757 3888 187 80 12 chrX 22578274 22579273 -144071023 - MYSERV16_I-int LTR ERVK 0 2326 1260 1 757 1725 247 13 26 chrX 22579738 22580120 -144070176 + MTD LTR MaLR 2 378 -41 1 757 288 0 0 0 chrX 22580154 22580186 -144070110 + (TAA)n Simple_repeat Simple_repeat 3 34 0 1 757 383 242 67 0 chrX 22580218 22580338 -144069958 + L1MA6 LINE L1 6166 6293 -7 1 757 1063 242 90 35 chrX 22580369 22580802 -144069494 - L1MC LINE L1 -1795 4351 3895 1 757 858 258 28 19 chrX 22581019 22581232 -144069064 - B3 SINE B2 -1 215 1 1 757 3395 56 2 2 chrX 22581261 22581689 -144068607 - L1_Mus1 LINE L1 0 6567 6140 1 757 836 261 42 30 chrX 22581699 22581936 -144068360 + MER82 DNA MER2_type 7 246 -407 1 757 521 305 67 6 chrX 22581935 22582100 -144068196 + MTEa LTR MaLR 5 179 -200 1 757 7184 171 22 4 chrX 22582100 22584245 -144066051 + Lx LINE L1 4465 6649 -5 1 757 22 0 0 0 chrX 22584778 22584800 -144065496 + AT_rich Low_complexity Low_complexity 1 22 0 1 757 1782 212 46 6 chrX 22584953 22585299 -144064997 + ORR1D2 LTR MaLR 3 362 -8 1 757 381 131 0 0 chrX 22585303 22585364 -144064932 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 757 943 153 50 22 chrX 22585444 22585625 -144064671 + B2_Mm2 SINE B2 1 186 -9 1 757 240 311 28 43 chrX 22585709 22585850 -144064446 - L2a LINE L2 -79 3347 3209 1 757 457 287 175 72 chrX 22586293 22586556 -144063740 + B4A SINE B4 3 292 0 1 757 222 176 0 0 chrX 22586556 22586607 -144063689 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 757 23 0 0 0 chrX 22586776 22586799 -144063497 + AT_rich Low_complexity Low_complexity 1 23 0 1 757 918 126 208 0 chrX 22587355 22587538 -144062758 - Lx LINE L1 -7 6647 6427 1 757 4914 107 15 6 chrX 22587535 22588317 -144061979 - Lx2 LINE L1 -351 6646 5857 1 757 312 70 0 0 chrX 22588872 22588915 -144061381 + (TGGA)n Simple_repeat Simple_repeat 3 45 0 1 757 725 265 29 19 chrX 22589063 22589271 -144061025 + B3 SINE B2 1 210 -6 1 757 432 0 0 0 chrX 22589599 22589647 -144060649 + (TC)n Simple_repeat Simple_repeat 2 49 0 1 757 324 0 0 0 chrX 22589647 22589682 -144060614 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 757 180 0 0 0 chrX 22589682 22589701 -144060595 + (GA)n Simple_repeat Simple_repeat 1 20 0 1 757 372 333 14 14 chrX 22590397 22590537 -144059759 - MIRb SINE MIR -34 234 95 1 757 638 275 79 22 chrX 22591359 22591586 -144058710 - MTD LTR MaLR 0 419 180 1 757 248 297 103 51 chrX 22591612 22591729 -144058567 - MIRb SINE MIR -103 165 43 1 757 333 296 26 90 chrX 22591895 22592103 -144058193 + MTEb LTR MaLR 166 373 -6 1 757 269 290 113 0 chrX 22592343 22592405 -144057891 + BC1_Mm scRNA scRNA 6 74 -78 1 757 2125 129 3 3 chrX 22594347 22594658 -144055638 - RLTR10E LTR ERVK 0 311 1 1 757 22 56 0 0 chrX 22594881 22594917 -144055379 + AT_rich Low_complexity Low_complexity 1 36 0 1 757 593 38 12 0 chrX 22595061 22595141 -144055155 + (TC)n Simple_repeat Simple_repeat 1 81 0 1 757 402 74 0 0 chrX 22595169 22595223 -144055073 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 757 248 149 0 0 chrX 22595287 22595334 -144054962 + (TTA)n Simple_repeat Simple_repeat 1 47 0 1 757 34 55 0 0 chrX 22595447 22595502 -144054794 + AT_rich Low_complexity Low_complexity 1 55 0 1 757 2890 196 2 0 chrX 22596275 22596781 -144053515 + Lx5 LINE L1 6527 7033 -17 1 757 3422 91 41 8 chrX 22596772 22597258 -144053038 + L1_Mus4 LINE L1 6134 6635 -1 1 757 278 282 57 28 chrX 22597502 22597608 -144052688 + MLT1A1 LTR MaLR 300 408 0 1 757 469 315 73 10 chrX 22597654 22597859 -144052437 - MamGypLTR2b LTR Gypsy -6 916 699 1 757 1249 48 0 0 chrX 22597888 22598035 -144052261 - B1_Mus2 SINE Alu 0 147 1 1 757 317 358 84 10 chrX 22598602 22598660 -144051636 + ID SINE ID 3 61 -163 1 757 387 0 0 0 chrX 22598660 22598703 -144051593 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 757 317 358 84 10 chrX 22598703 22598847 -144051449 + ID_B1 SINE B4 62 220 -4 1 757 1095 255 38 20 chrX 22598940 22599340 -144050956 + Lx8 LINE L1 4508 4914 -966 1 757 485 43 0 28 chrX 22599345 22599403 -144050893 + B1_Mur4 SINE Alu 80 137 -13 1 757 344 21 42 0 chrX 22599403 22599451 -144050845 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 1 757 485 43 0 28 chrX 22599451 22599464 -144050832 + B1_Mur4 SINE Alu 138 148 -2 1 757 1260 260 107 66 chrX 22599594 22600377 -144049919 + Lx8 LINE L1 5319 6163 -1310 1 757 474 18 0 0 chrX 22600377 22600432 -144049864 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 757 930 302 169 34 chrX 22600432 22600672 -144049624 + Lx8 LINE L1 6164 6444 -1029 1 757 1436 308 88 9 chrX 22600703 22601257 -144049039 + Lx8 LINE L1 6653 7250 -223 1 757 229 283 0 20 chrX 22601299 22601400 -144048896 + Lx8 LINE L1 7353 7451 -22 1 757 369 0 0 0 chrX 22601734 22601775 -144048521 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 757 240 100 0 0 chrX 22601775 22601814 -144048482 + (CAGAGA)n Simple_repeat Simple_repeat 4 43 0 1 757 3164 56 0 5 chrX 22602016 22602412 -144047884 - L1Md_F2 LINE L1 -10 6572 6179 1 757 2619 71 0 0 chrX 22602412 22602766 -144047530 + L1Md_F2 LINE L1 5674 6027 -555 1 757 376 310 78 13 chrX 22602882 22603065 -144047231 + MLT1D LTR MaLR 3 194 -433 1 757 1649 73 0 4 chrX 22603074 22603311 -144046985 + L1Md_F2 LINE L1 6352 6570 -12 1 757 338 269 41 16 chrX 22603314 22603435 -144046861 + MLT1D LTR MaLR 226 349 -156 1 757 2337 78 3 12 chrX 22603842 22604167 -144046129 - L1_Mus2 LINE L1 0 6566 6245 1 757 229 172 34 17 chrX 22604377 22604436 -144045860 - Lx8 LINE L1 -5 7468 7409 1 757 221 275 136 32 chrX 22604559 22604713 -144045583 + L2a LINE L2 3219 3388 -38 1 757 237 333 0 0 chrX 22605546 22605609 -144044687 + tRNA-Ala-GCY_ tRNA tRNA 1 63 -12 1 757 637 327 10 0 chrX 22605652 22605854 -144044442 - B3 SINE B2 -12 204 1 1 757 266 148 19 0 chrX 22605874 22605928 -144044368 + (TTA)n Simple_repeat Simple_repeat 3 57 0 1 757 1973 66 4 0 chrX 22605970 22606229 -144044067 + L1_Mus1 LINE L1 6300 6559 -8 1 757 8844 51 2 1 chrX 22606304 22608184 -144042112 - L1Md_F2 LINE L1 -13 6569 4687 1 757 25874 102 15 12 chrX 22608184 22614438 -144035858 - L1Md_F2 LINE L1 -23 6559 281 1 757 873 272 10 10 chrX 22614686 22614874 -144035422 + B3 SINE B2 1 188 -28 1 757 6345 44 1 0 chrX 22614874 22615641 -144034655 + L1Md_F2 LINE L1 5813 6580 -2 1 757 873 272 10 10 chrX 22615641 22615656 -144034640 + B3 SINE B2 189 203 -13 1 757 330 289 0 78 chrX 22615731 22615885 -144034411 - RMER10B LTR ERVL -63 335 194 1 757 181 54 0 98 chrX 22615890 22615931 -144034365 + (CAGAGA)n Simple_repeat Simple_repeat 2 38 0 1 757 28 0 0 0 chrX 22616128 22616156 -144034140 + AT_rich Low_complexity Low_complexity 1 28 0 1 757 238 345 0 0 chrX 22616560 22616618 -144033678 - tRNA-Ala-GCY_ tRNA tRNA -14 61 4 1 757 252 0 0 0 chrX 22617022 22617050 -144033246 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 757 1089 50 42 7 chrX 22617152 22617294 -144033002 + B1_Mm SINE Alu 1 147 0 2 757 358 65 16 16 chrX 22617294 22617357 -144032939 + (CAAAAA)n Simple_repeat Simple_repeat 6 68 0 2 757 387 321 89 32 chrX 22617511 22617701 -144032595 + MIRb SINE MIR 55 255 -13 2 757 364 316 24 37 chrX 22617726 22617890 -144032406 + Charlie4z DNA MER1_type 6 167 0 2 757 414 359 60 6 chrX 22618205 22618373 -144031923 + LTR90A LTR LTR 792 968 -8 2 757 21 0 0 0 chrX 22619314 22619335 -144030961 + AT_rich Low_complexity Low_complexity 1 21 0 2 757 234 0 0 0 chrX 22619339 22619365 -144030931 + (TTA)n Simple_repeat Simple_repeat 3 28 0 2 757 265 318 0 0 chrX 22619376 22619439 -144030857 - RSINE1 SINE B4 -21 144 82 2 757 2012 21 0 0 chrX 22619441 22619677 -144030619 - L1Md_A LINE L1 0 6582 6347 2 757 267 309 44 114 chrX 22619683 22619849 -144030447 - B4 SINE B4 -128 164 1 2 757 368 111 16 0 chrX 22619908 22619971 -144030325 + (TAA)n Simple_repeat Simple_repeat 2 65 0 2 757 443 340 0 85 chrX 22620168 22620332 -144029964 + LTR16A LTR ERVL 218 367 -84 2 757 190 316 117 25 chrX 22621323 22621443 -144028853 - MIRc SINE MIR -127 141 11 2 757 270 390 55 45 chrX 22621640 22621839 -144028457 + MIR SINE MIR 18 218 -44 2 757 196 302 145 8 chrX 22623240 22623357 -144026939 + MIR3 SINE MIR 2 134 -74 2 757 1798 236 9 56 chrX 22624204 22624635 -144025661 + MTD LTR MaLR 1 411 -8 2 757 595 226 0 17 chrX 22624807 22624924 -144025372 + PB1D9 SINE Alu 1 115 -5 2 757 279 54 0 0 chrX 22625473 22625510 -144024786 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 757 32 0 0 0 chrX 22625557 22625589 -144024707 + AT_rich Low_complexity Low_complexity 1 32 0 2 757 595 265 94 13 chrX 22625589 22625832 -144024464 - Lx7 LINE L1 -1876 5820 5537 2 757 329 264 54 0 chrX 22625837 22625981 -144024315 - Lx7 LINE L1 -923 5220 5049 2 757 344 149 38 68 chrX 22626279 22626399 -144023897 - Lx7 LINE L1 -863 5014 4874 2 757 21 57 0 0 chrX 22627902 22627937 -144022359 + AT_rich Low_complexity Low_complexity 1 35 0 2 757 612 0 0 0 chrX 22628345 22628413 -144021883 + (GA)n Simple_repeat Simple_repeat 1 68 0 2 757 1248 179 9 5 chrX 22629363 22629576 -144020720 - B3 SINE B2 -1 215 2 2 757 483 18 0 0 chrX 22629791 22629847 -144020449 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 757 255 191 0 0 chrX 22630340 22630387 -144019909 - L1_Mur3 LINE L1 -1076 4804 4758 2 757 607 331 50 8 chrX 22630384 22630643 -144019653 + Lx8 LINE L1 6821 7090 -383 2 757 1931 146 63 47 chrX 22630669 22631049 -144019247 - ORR1B1 LTR MaLR -8 386 1 2 757 644 303 123 15 chrX 22631102 22631370 -144018926 + Lx8 LINE L1 7167 7463 -10 2 757 22 0 0 0 chrX 22632296 22632318 -144017978 + AT_rich Low_complexity Low_complexity 1 22 0 2 757 4930 73 27 1 chrX 22632400 22633056 -144017240 + L1Md_F2 LINE L1 5898 6570 -12 2 757 231 359 28 19 chrX 22633557 22633665 -144016631 + RMER12 LTR ERVK 750 858 -464 2 757 382 282 72 103 chrX 22633741 22633786 -144016510 - B2_Mm2 SINE B2 -7 188 143 2 757 351 0 0 0 chrX 22633786 22633825 -144016471 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 757 555 276 30 15 chrX 22633825 22633973 -144016323 - B3 SINE B2 -53 142 1 2 757 450 0 0 0 chrX 22634294 22634344 -144015952 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 757 9093 147 14 44 chrX 22634362 22634649 -144015647 - RLTR21 LTR ERVK 0 1572 1291 2 757 252 0 0 0 chrX 22634649 22634677 -144015619 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 757 9093 147 14 44 chrX 22634677 22634843 -144015453 - RLTR21 LTR ERVK -282 1290 1128 2 757 195 42 0 0 chrX 22634843 22634867 -144015429 + (CATA)n Simple_repeat Simple_repeat 1 24 0 2 757 9093 147 14 44 chrX 22634867 22636033 -144014263 - RLTR21 LTR ERVK -445 1127 1 2 757 1166 295 48 25 chrX 22637676 22638111 -144012185 + Lx8 LINE L1 6792 7236 -237 2 757 333 0 0 0 chrX 22638200 22638237 -144012059 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 757 25 0 0 0 chrX 22638249 22638274 -144012022 + AT_rich Low_complexity Low_complexity 1 25 0 2 757 3013 132 36 0 chrX 22638284 22638732 -144011564 + L1VL4 LINE L1 26 489 -5813 2 757 23 33 0 0 chrX 22639335 22639365 -144010931 + AT_rich Low_complexity Low_complexity 1 30 0 2 757 502 283 131 0 chrX 22639387 22639624 -144010672 + L1MB8 LINE L1 5711 5978 -200 2 757 1113 316 42 53 chrX 22639626 22640288 -144010008 - L1MA5 LINE L1 -134 6166 5512 2 757 913 161 75 0 chrX 22640724 22640885 -144009411 + MTC LTR MaLR 8 180 -241 2 757 247 326 30 50 chrX 22641664 22641764 -144008532 - MIRc SINE MIR -70 198 101 2 757 21 36 0 0 chrX 22642149 22642177 -144008119 + AT_rich Low_complexity Low_complexity 1 28 0 2 757 263 309 69 41 chrX 22644100 22644245 -144006051 + MER5A DNA MER1_type 1 149 -40 2 757 1003 122 0 0 chrX 22644319 22644467 -144005829 - URR1A DNA MER1_type 0 226 79 2 757 26 50 0 0 chrX 22644688 22644728 -144005568 + AT_rich Low_complexity Low_complexity 1 40 0 2 757 254 228 14 11 chrX 22644758 22644829 -144005467 + B3 SINE B2 50 118 -77 2 757 450 319 132 45 chrX 22644895 22645227 -144005069 - RLTR9A LTR ERVK 0 368 8 2 757 339 299 7 87 chrX 22645391 22645541 -144004755 - ETnERV2-int LTR ERVK -31 6511 6374 2 757 1072 278 9 3 chrX 22645671 22646006 -144004290 - RLTR6-int LTR ERV1 -114 7664 7328 2 757 818 209 6 25 chrX 22646262 22646424 -144003872 - RMER16-int LTR ERVK -1428 3978 3820 2 757 432 55 0 0 chrX 22646424 22646479 -144003817 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 757 303 25 25 0 chrX 22646490 22646530 -144003766 - RMER16-int LTR ERVK -1706 3700 3660 2 757 693 246 28 0 chrX 22646532 22646711 -144003585 - ETnERV2-int LTR ERVK -1601 5805 5622 2 757 1694 201 24 9 chrX 22646702 22647034 -144003262 - RMER16-int LTR ERVK -3992 1414 1078 2 757 306 203 94 0 chrX 22647037 22647101 -144003195 - RMER16-int LTR ERVK -4587 819 750 2 757 1915 153 106 10 chrX 22647115 22647511 -144002785 - RMER16-int LTR ERVK -4736 670 237 2 757 180 0 0 0 chrX 22647709 22647729 -144002567 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 757 204 40 0 0 chrX 22647734 22647759 -144002537 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 2 757 443 330 118 56 chrX 22648028 22648368 -144001928 - RLTR9A LTR ERVK 0 368 8 2 757 22 56 0 0 chrX 22648430 22648466 -144001830 + AT_rich Low_complexity Low_complexity 1 36 0 2 757 801 250 117 21 chrX 22649265 22649453 -144000843 + B3 SINE B2 11 216 0 2 757 372 22 0 0 chrX 22649501 22649546 -144000750 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 757 290 217 130 0 chrX 22649575 22649667 -144000629 - L1M1 LINE L1 -451 5849 5746 2 757 449 245 89 85 chrX 22649660 22649919 -144000377 + L1_Rod LINE L1 5368 5627 -670 2 757 1665 223 24 45 chrX 22649950 22650325 -143999971 + ORR1D1 LTR MaLR 6 372 -2 2 757 285 344 0 19 chrX 22650327 22650338 -143999958 + L1_Rod LINE L1 5581 5591 -709 2 757 216 0 0 0 chrX 22650338 22650362 -143999934 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 757 313 334 6 26 chrX 22650362 22650522 -143999774 + L1_Rod LINE L1 5535 5734 -566 2 757 287 297 152 11 chrX 22650713 22650890 -143999406 - L2a LINE L2 0 3426 3225 2 757 3170 123 15 5 chrX 22650913 22651412 -143998884 - RLTR1C LTR ERV1 0 519 1 2 757 282 398 111 7 chrX 22651459 22651566 -143998730 - L2a LINE L2 -281 3145 3024 2 757 286 42 20 20 chrX 22651566 22651615 -143998681 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 2 757 282 387 71 10 chrX 22651615 22651771 -143998525 - L2a LINE L2 -396 3023 2856 2 757 209 318 70 70 chrX 22651896 22652011 -143998285 - MIRb SINE MIR -119 149 35 2 757 533 335 110 61 chrX 22652444 22652771 -143997525 + ORR1E LTR MaLR 12 354 -5 2 757 691 279 56 40 chrX 22653343 22653717 -143996579 + L1MB8 LINE L1 5798 6177 -1 2 757 283 263 13 13 chrX 22653873 22653950 -143996346 + L1_Rod LINE L1 5128 5204 -643 2 757 270 0 0 0 chrX 22653953 22653983 -143996313 + (TAA)n Simple_repeat Simple_repeat 1 30 0 2 757 206 245 0 0 chrX 22654165 22654218 -143996078 + (TAA)n Simple_repeat Simple_repeat 1 53 0 2 757 4942 50 0 2 chrX 22654432 22655037 -143995259 - L1Md_F2 LINE L1 -14 6568 5965 2 757 193 372 0 0 chrX 22655037 22655123 -143995173 - MIR SINE MIR -73 189 104 2 757 1453 278 15 18 chrX 22655239 22655628 -143994668 + Lx8 LINE L1 6818 7205 -268 2 757 285 29 0 0 chrX 22655715 22655749 -143994547 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 757 295 291 51 57 chrX 22657908 22658083 -143992213 + L1MB7 LINE L1 5996 6169 -15 2 757 331 372 0 0 chrX 22658252 22658365 -143991931 - MIR SINE MIR -119 143 31 2 757 826 186 0 7 chrX 22658392 22658538 -143991758 + B1_Mur3 SINE Alu 5 149 0 2 757 404 259 11 124 chrX 22658538 22658567 -143991729 + B4A SINE B4 118 244 -48 2 757 28 0 0 0 chrX 22658689 22658717 -143991579 + AT_rich Low_complexity Low_complexity 1 28 0 2 757 210 364 44 55 chrX 22658853 22659036 -143991260 - L2 LINE L2 -540 2879 2699 2 757 1963 228 10 22 chrX 22659209 22659621 -143990675 + Lx5 LINE L1 6644 7050 0 2 757 730 245 33 70 chrX 22659656 22659871 -143990425 + B3 SINE B2 1 207 -9 2 757 661 191 6 98 chrX 22659871 22659975 -143990321 + Lx7 LINE L1 7123 7222 -474 2 757 1092 73 0 0 chrX 22659975 22660111 -143990185 + B1_Mus1 SINE Alu 1 136 -12 2 757 618 51 0 0 chrX 22660111 22660189 -143990107 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 2 757 887 203 205 85 chrX 22660189 22660611 -143989685 + Lx7 LINE L1 7223 7690 -6 2 757 2791 94 5 29 chrX 22660647 22661044 -143989252 + MTB_Mm LTR MaLR 1 394 -13 2 757 2843 21 0 3 chrX 22661044 22661372 -143988924 + IAPLTR2b LTR ERVK 1 327 0 2 757 2791 94 5 29 chrX 22661372 22661391 -143988905 + MTB_Mm LTR MaLR 395 407 0 2 757 680 313 34 29 chrX 22662156 22662363 -143987933 + B3 SINE B2 3 210 -6 2 757 480 215 192 0 chrX 22662508 22662638 -143987658 + ORR1E LTR MaLR 1 155 -204 2 757 202 89 21 43 chrX 22662638 22662685 -143987611 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 2 757 325 200 19 78 chrX 22663158 22663261 -143987035 + RMER20B LTR ERVK 125 221 -406 2 757 222 37 0 0 chrX 22663403 22663430 -143986866 + (GGGAGA)n Simple_repeat Simple_repeat 4 30 0 2 757 3725 340 41 34 chrX 22663794 22665856 -143984440 - RodERV21-int LTR ERV1 -198 4793 2718 2 757 326 323 23 23 chrX 22666054 22666301 -143983995 - MER52-int LTR ERV1 -1948 3369 3170 2 757 343 313 47 46 chrX 22666680 22667019 -143983277 - MER52-int LTR ERV1 -1988 5103 4870 2 757 211 236 18 18 chrX 22668042 22668098 -143982198 + GA-rich Low_complexity Low_complexity 2 57 0 2 757 260 233 144 72 chrX 22668268 22668365 -143981931 + RMER20B LTR ERVK 296 399 -228 2 757 230 140 35 0 chrX 22668902 22668959 -143981337 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 3 757 546 16 0 0 chrX 22669073 22669136 -143981160 + (TC)n Simple_repeat Simple_repeat 1 63 0 3 757 992 221 51 0 chrX 22669151 22669346 -143980950 - B3 SINE B2 -10 206 2 3 757 359 186 101 34 chrX 22669347 22669436 -143980860 + MTEb LTR MaLR 283 377 -2 3 757 207 0 0 0 chrX 22670355 22670378 -143979918 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 757 315 0 0 0 chrX 22671924 22671959 -143978337 + (A)n Simple_repeat Simple_repeat 1 35 0 3 757 390 42 0 0 chrX 22672218 22672266 -143978030 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 757 328 260 29 0 chrX 22672399 22672503 -143977793 + L1MB7 LINE L1 6037 6143 -41 3 757 233 366 16 47 chrX 22672882 22673011 -143977285 + LTR33 LTR ERVL 37 161 -354 3 757 378 271 201 0 chrX 22673097 22673241 -143977055 + LTR33 LTR ERVL 335 507 -8 3 757 242 309 11 11 chrX 22673330 22673425 -143976871 + CT-rich Low_complexity Low_complexity 2 96 0 3 757 661 103 8 8 chrX 22673439 22673557 -143976739 + (TC)n Simple_repeat Simple_repeat 1 118 0 3 757 213 39 0 0 chrX 22673557 22673583 -143976713 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 757 570 29 0 0 chrX 22673921 22673989 -143976307 + (GAAA)n Simple_repeat Simple_repeat 2 69 0 3 757 607 255 150 0 chrX 22674245 22674398 -143975898 - B3A SINE B2 -17 181 6 3 757 768 211 28 0 chrX 22674431 22674573 -143975723 - B1_Mur1 SINE Alu -2 147 2 3 758 377 189 46 51 chrX 22675540 22675656 -143974640 + PB1D10 SINE Alu 33 149 0 3 758 1960 196 2 37 chrX 22675763 22676171 -143974125 + ORR1B1 LTR MaLR 1 394 0 3 758 473 309 34 17 chrX 22676266 22676444 -143973852 + B2_Mm2 SINE B2 1 181 -14 3 758 23 78 0 0 chrX 22676826 22676877 -143973419 + AT_rich Low_complexity Low_complexity 1 51 0 3 758 907 118 7 0 chrX 22677275 22677411 -143972885 + L1VL1 LINE L1 1 137 -6285 3 758 24179 62 1 3 chrX 22677423 22680732 -143969564 + L1Md_F3 LINE L1 2284 5586 -297 3 758 8144 42 2 3 chrX 22680733 22681731 -143968565 + L1Md_F3 LINE L1 5588 6584 0 3 758 1076 166 0 0 chrX 22681731 22681912 -143968384 + RLTR31A_Mm LTR ERVK 122 302 -282 3 758 16444 77 5 2 chrX 22681912 22684242 -143966054 + L1Md_F2 LINE L1 3250 5586 -297 3 758 8027 48 4 0 chrX 22684243 22685233 -143965063 + L1Md_F2 LINE L1 5588 6581 -1 3 758 778 223 0 7 chrX 22685541 22685681 -143964615 - B1_Mur1 SINE Alu -10 139 1 3 758 672 198 0 33 chrX 22685892 22686012 -143964284 + B3 SINE B2 19 134 -82 3 758 228 111 0 0 chrX 22686042 22686078 -143964218 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 758 940 253 119 17 chrX 22686113 22686643 -143963653 + L1M2 LINE L1 3925 4508 -1635 3 758 195 42 0 0 chrX 22686825 22686849 -143963447 + (TAAAA)n Simple_repeat Simple_repeat 5 28 0 3 758 500 220 52 29 chrX 22688243 22688379 -143961917 + B1_Mur2 SINE Alu 10 148 -1 3 758 1808 237 121 37 chrX 22688380 22688959 -143961337 + Lx9 LINE L1 7010 7636 -8 3 758 334 294 39 10 chrX 22689099 22689202 -143961094 + MLT1I LTR MaLR 306 411 0 3 758 6062 98 7 2 chrX 22689831 22690688 -143959608 + L1_Mus4 LINE L1 5775 6635 -1 3 758 397 260 0 0 chrX 22690907 22690984 -143959312 - B4A SINE B4 0 292 216 3 758 22 0 0 0 chrX 22690986 22691008 -143959288 + AT_rich Low_complexity Low_complexity 1 22 0 3 758 337 167 44 11 chrX 22691023 22691114 -143959182 - Lx7 LINE L1 0 7696 7603 3 758 448 236 155 1 chrX 22691124 22691270 -143959026 - B4A SINE B4 -49 243 76 3 758 245 51 0 25 chrX 22691343 22691383 -143958913 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 3 758 21 0 0 0 chrX 22691851 22691872 -143958424 + AT_rich Low_complexity Low_complexity 1 21 0 3 758 772 179 0 20 chrX 22692410 22692558 -143957738 + B1_Mus2 SINE Alu 1 145 -2 3 758 2357 222 51 102 chrX 22692868 22693774 -143956522 - RLTR42-int LTR ERVK -406 5116 4257 3 758 261 203 0 92 chrX 22694678 22694754 -143955542 - B4A SINE B4 -221 71 3 3 758 180 265 20 0 chrX 22694844 22694893 -143955403 - L2a LINE L2 0 3426 3377 3 758 639 260 132 28 chrX 22695047 22695214 -143955082 - B3 SINE B2 -13 203 13 3 758 2427 146 61 110 chrX 22695214 22695770 -143954526 + RLTR24 LTR ERV1 1 529 0 3 758 639 260 132 28 chrX 22695770 22695784 -143954512 - B3 SINE B2 -204 12 3 3 758 544 319 30 12 chrX 22695807 22695975 -143954321 - B3A SINE B2 -5 193 23 3 758 595 287 28 0 chrX 22697708 22697851 -143952445 - B1F SINE Alu -1 148 2 3 758 551 292 9 102 chrX 22697851 22697937 -143952359 - ID SINE ID -144 80 16 3 758 878 293 65 65 chrX 22698107 22698538 -143951758 + RMER5 LTR ERV1 12 442 -92 3 758 1466 223 123 3 chrX 22698659 22699032 -143951264 - MTD LTR MaLR -1 418 1 3 758 194 0 70 47 chrX 22699546 22699589 -143950707 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 758 308 312 70 8 chrX 22699633 22699755 -143950541 + MIR SINE MIR 22 151 -57 3 758 341 312 38 0 chrX 22699799 22699879 -143950417 + PB1D7 SINE Alu 1 83 -37 3 758 297 279 94 42 chrX 22700171 22700295 -143950001 + MIRm SINE MIR 34 158 -110 3 758 204 284 88 33 chrX 22700322 22700413 -143949883 - MIRb SINE MIR -47 221 126 3 758 1422 236 89 35 chrX 22700636 22701097 -143949199 + RMER5 LTR ERV1 1 486 -48 3 758 255 31 0 0 chrX 22701097 22701129 -143949167 + (A)n Simple_repeat Simple_repeat 1 32 0 3 758 2342 173 71 56 chrX 22701675 22702196 -143948100 - RLTR24 LTR ERV1 0 529 1 3 758 2740 105 0 0 chrX 22702353 22702763 -143947533 - Lx LINE L1 -609 6045 5636 3 758 3290 140 83 9 chrX 22702763 22703331 -143946965 + Lx LINE L1 6045 6654 0 3 758 484 266 164 26 chrX 22704315 22704504 -143945792 - B3 SINE B2 -1 215 1 3 758 373 361 21 0 chrX 22704504 22704648 -143945648 + MLT1A1 LTR MaLR 13 159 -249 3 758 332 314 8 8 chrX 22704876 22704995 -143945301 + MLT1A1 LTR MaLR 278 396 -12 3 758 676 318 61 14 chrX 22705008 22705301 -143944995 + MLT1B LTR MaLR 66 372 -18 3 758 812 287 103 50 chrX 22705451 22706336 -143943960 + L1_Rod LINE L1 4723 5722 -581 3 758 581 250 62 0 chrX 22706465 22706518 -143943778 - B3 SINE B2 -61 155 96 3 758 387 0 0 0 chrX 22706518 22706561 -143943735 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 758 581 250 62 0 chrX 22706561 22706651 -143943645 - B3 SINE B2 -121 95 4 3 758 456 225 23 4 chrX 22706918 22707018 -143943278 - PB1D7 SINE Alu -6 114 13 3 758 1440 257 55 23 chrX 22707029 22707375 -143942921 - ORR1D2 LTR MaLR -13 357 1 3 758 3083 42 10 5 chrX 22707741 22708124 -143942172 + L1Md_F3 LINE L1 6199 6583 -1 3 758 2328 190 44 37 chrX 22708309 22708827 -143941469 + RLTR11A LTR ERVK 7 528 0 3 758 1443 186 95 106 chrX 22709339 22709717 -143940579 - ORR1D1 LTR MaLR 0 374 1 3 758 340 326 37 18 chrX 22709742 22709898 -143940398 - ID_B1 SINE B4 -51 241 82 3 758 230 245 76 0 chrX 22710061 22710145 -143940151 + MTE2a LTR MaLR 1 97 -282 3 758 212 307 225 16 chrX 22710587 22710716 -143939580 + MER5A DNA MER1_type 28 183 -6 3 758 360 0 0 0 chrX 22711099 22711139 -143939157 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 758 2792 291 98 7 chrX 22711156 22712206 -143938090 + Lx9 LINE L1 6352 7497 -147 3 758 3107 47 10 0 chrX 22712355 22712739 -143937557 + RLTR10 LTR ERVK 1 388 -2 3 758 1349 262 106 14 chrX 22712867 22713216 -143937080 + MTD LTR MaLR 1 381 -38 3 758 21 0 0 0 chrX 22713466 22713487 -143936809 + AT_rich Low_complexity Low_complexity 1 21 0 3 758 327 348 17 17 chrX 22713531 22713651 -143936645 + L2a LINE L2 3303 3422 -4 3 758 583 279 96 0 chrX 22714582 22714718 -143935578 + B3 SINE B2 1 149 -67 3 758 356 265 38 29 chrX 22715084 22715189 -143935107 - MLT1C LTR MaLR -141 326 221 3 758 243 240 47 57 chrX 22715194 22715300 -143934996 - Lx2B LINE L1 -8 6992 6888 3 758 1608 200 55 0 chrX 22715297 22715622 -143934674 - Lx4B LINE L1 -373 6685 6343 3 758 3320 172 60 0 chrX 22715621 22716273 -143934023 + Lx4B LINE L1 5654 6344 -714 3 758 637 291 57 18 chrX 22716273 22716500 -143933796 - MLT1C LTR MaLR -231 236 1 3 758 840 20 0 0 chrX 22717119 22717217 -143933079 + (TTC)n Simple_repeat Simple_repeat 2 99 0 3 758 265 340 55 36 chrX 22717227 22717337 -143932959 - B1F2 SINE Alu -37 112 1 3 758 234 0 0 0 chrX 22718509 22718535 -143931761 + (T)n Simple_repeat Simple_repeat 1 26 0 3 758 391 252 103 9 chrX 22718997 22719113 -143931183 + ID_B1 SINE B4 82 208 -16 3 758 28447 11 0 6 chrX 22719252 22725426 -143924870 - L1Md_A LINE L1 0 6582 451 3 758 222 62 0 0 chrX 22725462 22725494 -143924802 + (A)n Simple_repeat Simple_repeat 1 32 0 3 758 656 267 52 10 chrX 22725732 22725925 -143924371 + B3 SINE B2 2 202 -14 3 758 195 290 96 103 chrX 22726644 22726790 -143923506 - L2 LINE L2 -444 2975 2831 3 758 641 254 101 30 chrX 22727025 22727224 -143923072 + URR1B DNA MER1_type 13 225 0 3 758 183 42 0 0 chrX 22727604 22727628 -143922668 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 758 189 0 0 0 chrX 22727648 22727669 -143922627 + (CAA)n Simple_repeat Simple_repeat 2 22 0 3 758 450 159 0 0 chrX 22727719 22727807 -143922489 + (TG)n Simple_repeat Simple_repeat 2 89 0 3 758 273 264 138 0 chrX 22727916 22728003 -143922293 + PB1 SINE Alu 27 125 -2 3 758 1995 171 51 10 chrX 22728035 22728430 -143921866 + RMER5 LTR ERV1 12 422 -112 3 758 1022 192 10 154 chrX 22728449 22728907 -143921389 + ORR1C2 LTR MaLR 42 394 0 3 758 407 200 12 12 chrX 22728916 22729002 -143921294 + RMER5 LTR ERV1 449 534 0 3 758 470 305 32 12 chrX 22729915 22730164 -143920132 + L1MA6 LINE L1 6047 6300 0 3 758 283 328 125 0 chrX 22730168 22730296 -143920000 + B1F1 SINE Alu 1 144 -5 3 758 620 338 13 6 chrX 22730297 22730455 -143919841 + RSINE1 SINE B4 3 161 -4 3 758 432 51 0 0 chrX 22730495 22730554 -143919742 + (A)n Simple_repeat Simple_repeat 1 59 0 3 758 608 314 39 0 chrX 22730557 22730710 -143919586 + B3A SINE B2 1 159 -39 3 758 2728 306 69 58 chrX 22730901 22731072 -143919224 + Lx8 LINE L1 6023 6191 -1282 4 758 495 0 0 0 chrX 22731072 22731127 -143919169 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 4 758 2728 306 69 58 chrX 22731127 22732146 -143918150 + Lx8 LINE L1 6192 7226 -247 4 758 486 107 26 18 chrX 22732148 22732262 -143918034 + (CAGA)n Simple_repeat Simple_repeat 2 116 0 4 758 514 252 132 14 chrX 22732299 22732512 -143917784 + Lx8 LINE L1 7227 7464 -9 4 758 2951 125 31 21 chrX 22732520 22733168 -143917128 + RMER17A LTR ERVK 1 887 -2 4 758 27 0 0 0 chrX 22733170 22733197 -143917099 + AT_rich Low_complexity Low_complexity 1 27 0 4 758 34 72 0 0 chrX 22734289 22734358 -143915938 + AT_rich Low_complexity Low_complexity 1 69 0 4 758 859 229 138 90 chrX 22734442 22734797 -143915499 - ORR1D1 LTR MaLR -2 372 1 4 758 522 0 0 0 chrX 22734887 22734945 -143915351 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 758 455 244 320 17 chrX 22735996 22736230 -143914066 + Lx8 LINE L1 7162 7466 -7 4 758 1299 300 98 7 chrX 22736316 22736900 -143913396 - L1M2 LINE L1 -875 5268 4632 4 758 519 324 37 43 chrX 22737098 22737285 -143913011 - MIR SINE MIR -69 193 8 4 758 206 381 47 12 chrX 22737306 22737391 -143912905 + L2b LINE L2 3270 3357 -18 4 758 679 227 7 20 chrX 22737395 22737541 -143912755 - ID_B1 SINE B4 0 224 85 4 758 243 0 0 0 chrX 22738223 22738250 -143912046 + (A)n Simple_repeat Simple_repeat 1 27 0 4 758 292 250 250 0 chrX 22739417 22739545 -143910751 + RSINE1 SINE B4 4 163 -2 4 758 351 0 0 0 chrX 22740508 22740547 -143909749 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 758 1147 212 0 0 chrX 22740664 22740886 -143909410 + Lx9 LINE L1 7197 7418 -226 4 758 417 20 0 0 chrX 22740888 22740938 -143909358 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 758 23 0 0 0 chrX 22741252 22741275 -143909021 + AT_rich Low_complexity Low_complexity 1 23 0 4 758 712 259 26 8 chrX 22741497 22741649 -143908647 + B3 SINE B2 55 207 -9 4 758 490 338 0 7 chrX 22741754 22741903 -143908393 + RSINE1 SINE B4 2 149 -16 4 758 557 348 6 6 chrX 22741954 22742113 -143908183 + RSINE1 SINE B4 2 160 -5 4 758 255 61 0 0 chrX 22742113 22742146 -143908150 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 4 758 553 248 62 100 chrX 22742239 22742561 -143907735 + MT2B LTR ERVL 1 298 -235 4 758 2115 163 14 3 chrX 22742581 22742926 -143907370 - ORR1B2 LTR MaLR -8 359 11 4 758 537 208 5 247 chrX 22742942 22743067 -143907229 + MT2B LTR ERVL 353 529 -55 4 758 4073 141 24 1 chrX 22743067 22743730 -143906566 + Lx2B LINE L1 6323 7000 0 4 758 532 208 5 247 chrX 22743730 22743827 -143906469 + MT2B LTR ERVL 530 584 0 4 758 764 260 83 17 chrX 22744102 22744282 -143906014 + B3 SINE B2 2 193 -23 4 758 2650 58 6 14 chrX 22744323 22744670 -143905626 + ORR1A1 LTR MaLR 1 344 -2 4 758 736 74 0 8 chrX 22745001 22745123 -143905173 - L1Md_F2 LINE L1 0 6582 6462 4 758 285 353 58 14 chrX 22745193 22745331 -143904965 - MIRb SINE MIR -119 149 6 4 758 23 0 0 0 chrX 22745619 22745642 -143904654 + AT_rich Low_complexity Low_complexity 1 23 0 4 758 502 255 66 0 chrX 22745644 22745750 -143904546 - B3 SINE B2 -6 210 98 4 758 2792 44 6 12 chrX 22745813 22746159 -143904137 + ORR1A1 LTR MaLR 1 344 -2 4 758 343 293 0 2 chrX 22746309 22746399 -143903897 - B3A SINE B2 -123 93 5 4 758 232 296 88 44 chrX 22746764 22746877 -143903419 - MIR3 SINE MIR -9 199 82 4 758 501 17 0 0 chrX 22747221 22747279 -143903017 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 758 7723 70 6 17 chrX 22747280 22748318 -143901978 - L1Md_F2 LINE L1 -16 6566 5507 4 758 387 0 0 0 chrX 22748856 22748899 -143901397 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 758 216 196 22 0 chrX 22748901 22748947 -143901349 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 758 404 297 50 0 chrX 22750430 22750531 -143899765 + B4A SINE B4 112 217 -75 4 758 785 178 224 16 chrX 22750510 22750693 -143899603 - URR1A DNA MER1_type -4 222 2 4 758 298 319 0 42 chrX 22750693 22750787 -143899509 + B4A SINE B4 197 286 -6 4 758 509 288 123 53 chrX 22751582 22751809 -143898487 - MIRb SINE MIR 0 268 26 4 758 225 273 63 25 chrX 22751856 22751935 -143898361 + MER5B DNA MER1_type 82 163 -15 4 758 242 29 0 28 chrX 22752648 22752684 -143897612 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 758 431 281 141 0 chrX 22752713 22752834 -143897462 + B1_Mur1 SINE Alu 5 142 -7 4 758 205 379 33 41 chrX 22752908 22753029 -143897267 + MIR SINE MIR 9 128 -134 4 758 226 305 181 0 chrX 22753094 22753199 -143897097 + MIR3 SINE MIR 9 132 -76 4 758 1532 146 238 6 chrX 22753286 22753307 -143896989 + Lx5 LINE L1 5469 5489 -388 4 758 814 225 99 5 chrX 22753307 22753499 -143896797 + B3 SINE B2 1 210 -6 4 758 7255 147 229 7 chrX 22753499 22753829 -143896467 + Lx5 LINE L1 5490 5903 -1147 4 758 2937 67 51 0 chrX 22753829 22754220 -143896076 + RLTR10A LTR ERVK 1 411 0 4 758 7255 164 84 30 chrX 22754220 22755353 -143894943 + Lx5 LINE L1 5904 7047 -3 4 758 772 160 19 0 chrX 22755367 22755523 -143894773 + GA-rich Low_complexity Low_complexity 4 162 0 4 758 430 172 20 27 chrX 22755803 22755952 -143894344 + (TA)n Simple_repeat Simple_repeat 2 149 0 4 758 21 0 0 0 chrX 22756221 22756242 -143894054 + AT_rich Low_complexity Low_complexity 1 21 0 4 758 643 295 20 35 chrX 22756294 22756491 -143893805 + B3 SINE B2 5 198 0 4 758 6582 146 15 15 chrX 22757206 22758323 -143891973 + Lx4A LINE L1 5933 7049 -9 4 758 270 0 0 0 chrX 22758341 22758371 -143891925 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 4 758 438 53 0 0 chrX 22758537 22758594 -143891702 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 758 189 121 0 0 chrX 22758594 22758627 -143891669 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 4 758 31 82 0 0 chrX 22758753 22758826 -143891470 + AT_rich Low_complexity Low_complexity 1 73 0 4 758 411 269 0 108 chrX 22759174 22759206 -143891090 - MER3 DNA MER1_type -59 150 122 4 758 2446 158 7 37 chrX 22759206 22759671 -143890625 + RLTR11B LTR ERVK 1 451 -2 4 758 411 269 0 108 chrX 22759671 22759796 -143890500 - MER3 DNA MER1_type -88 121 10 4 758 865 203 0 0 chrX 22759796 22759944 -143890352 + B1_Mur4 SINE Alu 2 149 -1 4 758 195 69 0 0 chrX 22759949 22759978 -143890318 + (A)n Simple_repeat Simple_repeat 1 29 0 4 758 417 20 0 0 chrX 22759979 22760029 -143890267 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 758 372 300 65 76 chrX 22760076 22760260 -143890036 - MLT1E2 LTR MaLR -9 618 437 4 758 1137 260 135 3 chrX 22761029 22761391 -143888905 - MTD LTR MaLR 0 419 10 4 758 18135 127 27 7 chrX 22761443 22765229 -143885067 + L1Md_F LINE L1 183 4047 -1836 4 758 291 299 108 19 chrX 22765290 22765447 -143884849 - ORR1C2 LTR MaLR -196 188 18 4 758 453 281 80 55 chrX 22765541 22765906 -143884390 - L1MC4a LINE L1 -7 7875 7502 4 758 210 336 124 9 chrX 22766865 22766970 -143883326 - MIRc SINE MIR -62 206 90 4 758 28066 129 34 6 chrX 22767700 22773750 -143876546 + L1_Mus3 LINE L1 409 6631 -7 4 758 1101 269 102 86 chrX 22774126 22774488 -143875808 - MTE2b LTR MaLR -11 368 1 4 758 333 341 11 22 chrX 22774496 22774712 -143875584 - L1MA4 LINE L1 -417 5883 5602 4 758 1717 146 99 61 chrX 22775117 22775301 -143874995 - RMER17C LTR ERVK 0 410 213 4 758 642 68 0 0 chrX 22775301 22775389 -143874907 + (GA)n Simple_repeat Simple_repeat 2 89 0 4 758 1717 146 99 61 chrX 22775389 22775599 -143874697 - RMER17C LTR ERVK -198 212 1 4 758 3885 109 36 58 chrX 22775599 22776268 -143874028 - RMER17C-int LTR ERVK 0 3238 2585 4 758 1347 77 15 20 chrX 22776268 22776468 -143873828 + L1Md_F2 LINE L1 6384 6582 0 4 758 225 0 0 0 chrX 22776495 22776520 -143873776 + (A)n Simple_repeat Simple_repeat 1 25 0 4 758 280 182 0 0 chrX 22776520 22776564 -143873732 + LSU-rRNA_Hsa rRNA rRNA 4203 4246 -789 4 758 285 99 48 24 chrX 22776595 22776678 -143873618 + (TA)n Simple_repeat Simple_repeat 1 85 0 4 758 657 166 68 47 chrX 22776727 22777009 -143873287 - RMER17C-int LTR ERVK -736 2502 2290 4 758 2670 132 51 80 chrX 22777006 22777363 -143872933 - RMER17C-int LTR ERVK -1427 1811 1437 4 758 1017 103 14 0 chrX 22777363 22777508 -143872788 + B1_Mus2 SINE Alu 1 147 0 4 758 2670 132 51 80 chrX 22777508 22777701 -143872595 - RMER17C-int LTR ERVK -1802 1436 1277 4 758 312 93 0 0 chrX 22778088 22778131 -143872165 - 7SLRNA srpRNA srpRNA -106 208 166 4 758 1855 214 90 135 chrX 22778188 22779075 -143871221 - RMER17C-int LTR ERVK -2391 847 1 4 758 1737 159 34 27 chrX 22779085 22779492 -143870804 - RMER17C LTR ERVK 0 410 1 4 758 556 311 42 31 chrX 22779574 22779881 -143870415 + L1MB8 LINE L1 5578 5888 -352 4 758 1931 100 13 46 chrX 22779884 22780189 -143870107 - RMER19A LTR ERVK 0 737 443 4 758 21332 163 70 5 chrX 22780189 22785619 -143864677 - L1_Mus3 LINE L1 -147 6491 670 4 758 2350 133 8 16 chrX 22785661 22786029 -143864267 - RMER19A LTR ERVK -372 365 1 4 758 287 255 45 76 chrX 22786038 22786195 -143864101 + L1MB8 LINE L1 5901 6052 -122 4 758 25 0 0 0 chrX 22787087 22787112 -143863184 + AT_rich Low_complexity Low_complexity 1 25 0 4 758 915 68 121 0 chrX 22787115 22787247 -143863049 + B1_Mus1 SINE Alu 1 148 0 4 758 603 0 0 0 chrX 22787253 22787320 -143862976 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 4 758 744 264 70 58 chrX 22787426 22787683 -143862613 + MT2A LTR ERVL 141 400 -133 4 758 301 0 22 43 chrX 22787684 22787730 -143862566 + (TTTTTG)n Simple_repeat Simple_repeat 3 47 0 4 758 1114 75 0 33 chrX 22787739 22787891 -143862405 - B1_Mus1 SINE Alu 0 148 2 4 758 195 42 0 0 chrX 22787945 22787969 -143862327 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 758 446 316 90 0 chrX 22788006 22788139 -143862157 + RSINE1 SINE B4 20 164 -1 4 758 1346 199 106 61 chrX 22788955 22789133 -143861163 + ORR1C2 LTR MaLR 1 171 -213 4 758 1125 0 0 0 chrX 22789133 22789258 -143861038 + (TCTCCC)n Simple_repeat Simple_repeat 3 127 0 4 758 1346 199 106 61 chrX 22789258 22789438 -143860858 + ORR1C2 LTR MaLR 172 375 -9 4 758 21 0 0 0 chrX 22789679 22789700 -143860596 + AT_rich Low_complexity Low_complexity 1 21 0 4 758 305 316 0 0 chrX 22789970 22790068 -143860228 + (TA)n Simple_repeat Simple_repeat 1 98 0 4 758 663 299 39 5 chrX 22790075 22790283 -143860013 + Lx8 LINE L1 6654 6868 -605 4 758 433 260 0 0 chrX 22790287 22790387 -143859909 - ORR1E LTR MaLR -254 105 6 4 758 546 224 0 0 chrX 22790547 22790699 -143859597 + CT-rich Low_complexity Low_complexity 3 154 0 4 758 700 194 7 65 chrX 22790701 22790855 -143859441 - B1_Mus2 SINE Alu 0 147 3 4 758 1205 220 122 32 chrX 22791437 22791780 -143858516 + ORR1D1 LTR MaLR 1 374 0 4 758 741 293 102 8 chrX 22791823 22792088 -143858208 + MER58B DNA MER1_type 17 306 -35 5 758 2699 192 21 11 chrX 22792395 22792957 -143857339 + Lx4B LINE L1 6472 7039 -19 5 758 297 0 0 0 chrX 22792957 22792990 -143857306 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 5 758 297 0 0 0 chrX 22793518 22793551 -143856745 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 5 758 315 0 0 0 chrX 22793557 22793592 -143856704 + (TTG)n Simple_repeat Simple_repeat 2 36 0 5 758 2279 167 44 7 chrX 22793820 22794225 -143856071 + MTC LTR MaLR 2 421 0 5 758 642 26 0 0 chrX 22794273 22794349 -143855947 + (CA)n Simple_repeat Simple_repeat 1 76 0 5 758 1247 76 0 11 chrX 22795021 22795195 -143855101 - L1_Mus1 LINE L1 -1 6566 6395 5 758 641 238 35 7 chrX 22795274 22795418 -143854878 + B1_Mur4 SINE Alu 2 149 -1 5 758 229 367 100 0 chrX 22795523 22795613 -143854683 + PB1 SINE Alu 7 105 -22 5 758 221 186 0 33 chrX 22799148 22799209 -143851087 + GA-rich Low_complexity Low_complexity 3 61 0 5 758 14968 125 33 19 chrX 22799441 22802405 -143847891 - L1_Mus2 LINE L1 0 6566 3560 5 758 7198 74 8 7 chrX 22802423 22804027 -143846269 - L1Md_F2 LINE L1 -12 6570 4970 5 758 6651 98 29 1 chrX 22804027 22805045 -143845251 - MusHAL1 LINE L1 -332 2380 1335 5 758 691 170 123 13 chrX 22805490 22805645 -143844651 + Lx4B LINE L1 6883 7054 -4 5 759 461 268 42 24 chrX 22807067 22807235 -143843061 - L1MA6 LINE L1 -5 6295 6125 5 759 199 341 21 42 chrX 22807551 22807646 -143842650 - L3b LINE CR1 -205 277 185 5 759 575 298 54 84 chrX 22808131 22808464 -143841832 + MER58B DNA MER1_type 1 323 -18 5 759 1182 75 75 0 chrX 22808599 22808773 -143841523 + B2_Mm2 SINE B2 2 188 -7 5 759 644 76 11 0 chrX 22809531 22809623 -143840673 + BC1_Mm scRNA scRNA 1 93 -59 5 759 252 0 0 0 chrX 22809713 22809741 -143840555 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 759 1115 75 0 0 chrX 22810156 22810303 -143839993 + B1_Mus2 SINE Alu 1 147 0 5 759 278 88 0 50 chrX 22810303 22810363 -143839933 + (A)n Simple_repeat Simple_repeat 1 57 0 5 759 656 188 98 0 chrX 22810479 22810612 -143839684 - B1_Mur3 SINE Alu -3 146 1 5 759 375 315 9 9 chrX 22810820 22810929 -143839367 - PB1D10 SINE Alu -6 111 3 5 759 333 0 0 0 chrX 22810964 22811001 -143839295 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 759 22 0 0 0 chrX 22811541 22811563 -143838733 + AT_rich Low_complexity Low_complexity 1 22 0 5 759 534 149 111 9 chrX 22811904 22812012 -143838284 - PB1D9 SINE Alu 0 120 2 5 759 312 284 12 0 chrX 22814300 22814381 -143835915 + ID4_ SINE ID 2 83 0 5 759 24 53 0 0 chrX 22814519 22814557 -143835739 + AT_rich Low_complexity Low_complexity 1 38 0 5 759 321 356 0 10 chrX 22815339 22815441 -143834855 + PB1D10 SINE Alu 5 105 -12 5 759 366 297 18 18 chrX 22815535 22815648 -143834648 + PB1D7 SINE Alu 1 113 -7 5 759 229 231 19 0 chrX 22816604 22816656 -143833640 + U5 snRNA snRNA 1 53 -63 5 759 22 0 0 0 chrX 22816740 22816762 -143833534 + AT_rich Low_complexity Low_complexity 1 22 0 5 759 315 0 0 0 chrX 22817040 22817075 -143833221 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 759 237 108 27 0 chrX 22818216 22818253 -143832043 + L1_Mur3 LINE L1 5362 5399 -481 5 759 537 276 92 68 chrX 22818652 22818990 -143831306 + L1_Mur3 LINE L1 5393 5738 -142 5 759 330 207 85 0 chrX 22818993 22819075 -143831221 + L1MA5 LINE L1 5851 5939 -361 5 759 21 36 0 0 chrX 22819100 22819128 -143831168 + AT_rich Low_complexity Low_complexity 1 28 0 5 759 517 200 340 0 chrX 22819446 22819596 -143830700 - B3 SINE B2 -14 202 2 5 759 2737 54 8 3 chrX 22820162 22820515 -143829781 + L1Md_F2 LINE L1 6228 6582 0 5 759 215 31 31 0 chrX 22820849 22820881 -143829415 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 5 759 4635 37 9 14 chrX 22821151 22821728 -143828568 + L1Md_F2 LINE L1 6008 6581 -1 5 759 1216 41 0 0 chrX 22821742 22821889 -143828407 + B1_Mus2 SINE Alu 1 147 0 5 759 541 201 96 44 chrX 22822143 22822278 -143828018 + B1_Mur1 SINE Alu 1 142 -7 5 759 391 110 44 0 chrX 22822311 22822402 -143827894 + (TCTCTG)n Simple_repeat Simple_repeat 2 96 0 5 759 342 67 0 0 chrX 22822402 22822447 -143827849 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 759 796 252 82 19 chrX 22823113 22823174 -143827122 - L1MA6 LINE L1 0 6300 6229 5 759 188 0 0 69 chrX 22823174 22823203 -143827093 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 5 759 796 259 118 24 chrX 22823203 22823614 -143826682 - L1MA6 LINE L1 -72 6228 5752 5 759 187 214 91 45 chrX 22826669 22826713 -143823583 - L3b LINE CR1 -19 463 418 5 759 453 50 0 0 chrX 22827990 22828050 -143822246 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 759 931 302 34 25 chrX 22828076 22828429 -143821867 - Lx9 LINE L1 -224 7420 7065 5 759 301 305 270 30 chrX 22829853 22830086 -143820210 + L1MEc LINE L1 35 323 -6077 5 759 392 350 85 42 chrX 22830397 22830800 -143819496 + L1MD2 LINE L1 5728 6146 -33 5 759 243 322 67 24 chrX 22830811 22831041 -143819255 + L1MEc LINE L1 2439 2677 -3642 5 759 279 0 0 0 chrX 22831041 22831072 -143819224 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 759 241 327 103 31 chrX 22831072 22831191 -143819105 + L1MEc LINE L1 2678 2813 -3506 5 759 791 264 172 25 chrX 22831232 22831551 -143818745 + Lx9 LINE L1 6741 7106 -538 5 759 277 346 58 26 chrX 22832236 22832426 -143817870 + MIRc SINE MIR 37 232 -36 5 759 249 286 0 0 chrX 22832480 22832543 -143817753 - MIRb SINE MIR -19 249 187 5 759 592 255 79 8 chrX 22832760 22833001 -143817295 + L1MA6 LINE L1 6026 6283 -17 5 759 679 257 26 22 chrX 22833308 22833606 -143816690 + L1M4 LINE L1 5174 5484 -694 5 759 332 152 15 0 chrX 22833667 22833733 -143816563 + (TA)n Simple_repeat Simple_repeat 1 67 0 5 759 297 306 47 47 chrX 22833769 22833896 -143816400 - MIRb SINE MIR -123 145 19 5 759 230 258 101 61 chrX 22834356 22834455 -143815841 - RLTR25A LTR ERVK -399 704 602 5 759 3071 264 132 24 chrX 22834463 22836110 -143814186 - Lx8 LINE L1 -318 7155 5308 5 759 480 282 9 9 chrX 22836122 22836233 -143814063 + B1F SINE Alu 38 148 -1 5 759 938 280 50 41 chrX 22836461 22836800 -143813496 + MER2 DNA MER2_type 4 345 0 5 759 555 310 14 0 chrX 22836817 22836962 -143813334 + MER5A DNA MER1_type 40 186 -3 5 759 234 0 0 0 chrX 22837111 22837137 -143813159 + (T)n Simple_repeat Simple_repeat 1 26 0 5 759 237 132 0 0 chrX 22837592 22837630 -143812666 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 759 21 57 0 0 chrX 22837630 22837665 -143812631 + AT_rich Low_complexity Low_complexity 1 35 0 5 759 402 21 0 0 chrX 22838138 22838185 -143812111 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 759 26 0 0 0 chrX 22838198 22838224 -143812072 + AT_rich Low_complexity Low_complexity 1 26 0 5 759 234 288 57 41 chrX 22838364 22838487 -143811809 - L1MC1 LINE L1 -6 6327 6203 5 759 362 97 48 0 chrX 22839167 22839229 -143811067 + (TTTTC)n Simple_repeat Simple_repeat 4 68 0 5 759 772 231 87 5 chrX 22839229 22839425 -143810871 - B3 SINE B2 -4 212 1 5 759 441 0 0 0 chrX 22839775 22839824 -143810472 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 5 759 495 0 0 0 chrX 22840547 22840602 -143809694 + (TCTA)n Simple_repeat Simple_repeat 1 55 0 5 759 328 361 50 45 chrX 22840949 22841149 -143809147 - Tigger10 DNA Tigger -37 1806 1606 5 759 529 273 71 29 chrX 22841514 22841684 -143808612 + MER20 DNA MER1_type 43 219 0 5 759 317 372 71 66 chrX 22841960 22842340 -143807956 - Tigger10 DNA Tigger -1077 766 385 5 759 292 289 48 0 chrX 22844849 22844932 -143805364 - MIRb SINE MIR -12 256 170 5 759 676 292 18 39 chrX 22845230 22845511 -143804785 + L1MA5 LINE L1 6026 6300 0 5 759 409 232 0 0 chrX 22845532 22845614 -143804682 + PB1 SINE Alu 35 116 -11 5 759 456 250 23 0 chrX 22845640 22845728 -143804568 + B3A SINE B2 2 91 -107 5 759 423 0 0 0 chrX 22845730 22845777 -143804519 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 759 29 60 0 0 chrX 22845815 22845865 -143804431 + AT_rich Low_complexity Low_complexity 1 50 0 5 759 32 57 0 0 chrX 22846358 22846411 -143803885 + AT_rich Low_complexity Low_complexity 1 53 0 5 759 1847 184 32 38 chrX 22846655 22847028 -143803268 + ORR1C1 LTR MaLR 1 371 -7 5 759 366 358 0 0 chrX 22848634 22848729 -143801567 - B3 SINE B2 -3 213 119 5 759 298 256 22 22 chrX 22848722 22848814 -143801482 - B2_Mm1a SINE B2 -88 105 14 5 759 3140 281 105 50 chrX 22848902 22849471 -143800825 + Lx8 LINE L1 6211 6785 -688 5 759 261 0 0 0 chrX 22849471 22849500 -143800796 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 759 1075 66 0 0 chrX 22849500 22849637 -143800659 - B1_Mus2 SINE Alu -9 138 2 5 759 3140 281 105 50 chrX 22849637 22850263 -143800033 + Lx8 LINE L1 6786 7472 -1 5 759 23 78 0 0 chrX 22850456 22850507 -143799789 + AT_rich Low_complexity Low_complexity 1 51 0 5 759 794 106 8 0 chrX 22851145 22851268 -143799028 + (TTCC)n Simple_repeat Simple_repeat 2 125 0 5 759 718 265 70 0 chrX 22851276 22851461 -143798835 - B3 SINE B2 -17 199 2 5 759 324 310 0 0 chrX 22852304 22852391 -143797905 + RSINE1 SINE B4 4 90 -75 5 759 1300 229 113 14 chrX 22852391 22852736 -143797560 - ORR1C2 LTR MaLR 0 384 6 5 759 363 312 25 0 chrX 22852734 22852814 -143797482 + RSINE1 SINE B4 79 160 -5 5 759 1628 33 5 9 chrX 22853466 22853680 -143796616 + L1Md_F3 LINE L1 6372 6584 0 5 759 901 293 126 3 chrX 22854312 22854769 -143795527 + MLT1E2 LTR MaLR 90 501 -4 5 759 590 171 202 8 chrX 22854959 22855083 -143795213 + B1_Mur1 SINE Alu 2 149 0 5 759 200 125 25 0 chrX 22855236 22855276 -143795020 + (CAAAA)n Simple_repeat Simple_repeat 5 45 0 5 759 284 257 14 0 chrX 22855344 22855414 -143794882 + ID4 SINE ID 7 77 -6 5 759 315 344 98 8 chrX 22855466 22855589 -143794707 + MIRb SINE MIR 18 151 -117 6 759 243 0 0 0 chrX 22856449 22856476 -143793820 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 759 347 298 39 87 chrX 22857504 22857710 -143792586 + L3 LINE CR1 4283 4478 -11 6 759 42 36 0 0 chrX 22860942 22860998 -143789298 + AT_rich Low_complexity Low_complexity 1 56 0 6 759 234 0 0 0 chrX 22862048 22862074 -143788222 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 759 234 321 117 0 chrX 22864842 22865004 -143785292 - MamRep434 DNA TcMar -244 182 2 6 759 184 184 132 0 chrX 22865445 22865483 -143784813 + MIRm SINE MIR 127 169 -107 6 759 189 74 0 0 chrX 22866133 22866160 -143784136 + (CAA)n Simple_repeat Simple_repeat 1 27 0 6 759 724 45 0 18 chrX 22866919 22867032 -143783264 + L1Md_F2 LINE L1 6469 6579 -3 6 759 832 159 0 21 chrX 22867515 22867656 -143782640 + B1_Mus1 SINE Alu 11 148 0 6 759 323 100 0 32 chrX 22867656 22867718 -143782578 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 6 759 973 38 8 8 chrX 22867817 22867949 -143782347 - B1_Mus1 SINE Alu -2 146 15 6 759 5527 85 0 15 chrX 22867949 22868727 -143781569 + L1_Mus2 LINE L1 5801 6566 0 6 759 273 57 0 0 chrX 22869458 22869493 -143780803 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 759 228 230 196 20 chrX 22870469 22870571 -143779725 - MER5A1 DNA MER1_type -1 165 46 6 759 301 334 136 14 chrX 22870964 22871180 -143779116 + MIRc SINE MIR 16 266 -2 6 759 198 0 0 0 chrX 22871285 22871307 -143778989 + (A)n Simple_repeat Simple_repeat 1 22 0 6 759 318 305 11 0 chrX 22871325 22871420 -143778876 - Tigger10 DNA Tigger -56 1787 1692 6 759 31 26 0 0 chrX 22875365 22875403 -143774893 + AT_rich Low_complexity Low_complexity 1 38 0 6 759 2125 165 34 5 chrX 22876415 22876798 -143773498 + ORR1B1 LTR MaLR 1 394 0 6 759 720 238 12 48 chrX 22876851 22877019 -143773277 + B3 SINE B2 2 163 -53 6 759 1375 150 64 144 chrX 22877020 22877498 -143772798 + RMER17C LTR ERVK 16 439 -519 6 759 186 150 0 0 chrX 22877743 22877783 -143772513 + (A)n Simple_repeat Simple_repeat 1 40 0 6 759 221 272 150 60 chrX 22877969 22878102 -143772194 - MIRc SINE MIR -96 172 28 6 759 234 0 0 0 chrX 22878117 22878143 -143772153 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 759 846 162 3 0 chrX 22878144 22878508 -143771788 + GA-rich Low_complexity Low_complexity 1 364 0 6 759 674 82 10 0 chrX 22878508 22878606 -143771690 + (GGA)n Simple_repeat Simple_repeat 2 100 0 6 759 510 114 0 0 chrX 22878983 22879062 -143771234 + (CA)n Simple_repeat Simple_repeat 2 80 0 6 759 555 302 14 0 chrX 22881336 22881475 -143768821 + RSINE1 SINE B4 16 156 -9 6 759 375 127 0 0 chrX 22881477 22881540 -143768756 + (CATA)n Simple_repeat Simple_repeat 2 64 0 6 759 2119 188 47 27 chrX 22881584 22882116 -143768180 + Lx4A LINE L1 6422 7058 0 6 759 2162 172 37 0 chrX 22882125 22882503 -143767793 + ORR1B1 LTR MaLR 1 392 -2 6 759 504 0 0 0 chrX 22884168 22884224 -143766072 + (TA)n Simple_repeat Simple_repeat 1 56 0 6 759 27 29 0 0 chrX 22884693 22884727 -143765569 + AT_rich Low_complexity Low_complexity 1 34 0 6 759 239 261 0 74 chrX 22886274 22886369 -143763927 - L1MA9 LINE L1 -38 6274 6187 6 759 2321 144 2 69 chrX 22886371 22886789 -143763507 + ORR1B1 LTR MaLR 3 392 -2 6 759 685 301 88 52 chrX 22886821 22887400 -143762896 - L1MA9 LINE L1 -159 6153 5548 6 759 306 0 0 0 chrX 22887400 22887434 -143762862 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 759 685 301 88 52 chrX 22887434 22887510 -143762786 - L1MA9 LINE L1 -765 5547 5475 6 759 467 264 54 97 chrX 22887525 22887583 -143762713 - L1MA9 LINE L1 -942 5198 5154 6 759 936 248 29 0 chrX 22887583 22887793 -143762503 - B3 SINE B2 0 216 1 6 759 467 264 54 97 chrX 22887793 22888032 -143762264 - L1MA9 LINE L1 -987 5153 4914 6 759 444 182 197 60 chrX 22888158 22888275 -143762021 + B1_Mus1 SINE Alu 1 133 -15 6 759 9994 138 86 22 chrX 22888278 22890286 -143760010 + L1_Mur2 LINE L1 1279 3414 -2463 6 759 277 114 0 0 chrX 22890293 22890337 -143759959 - L1_Mur3 LINE L1 -4377 1503 1460 6 759 815 229 16 11 chrX 22890340 22890525 -143759771 - L1_Mur3 LINE L1 -7495 233 48 6 759 23 78 0 0 chrX 22890999 22891050 -143759246 + AT_rich Low_complexity Low_complexity 1 51 0 6 759 31 0 0 0 chrX 22891312 22891343 -143758953 + AT_rich Low_complexity Low_complexity 1 31 0 6 759 294 305 12 0 chrX 22891446 22891528 -143758768 - MIRb SINE MIR -75 193 111 6 759 21 71 0 0 chrX 22891669 22891711 -143758585 + AT_rich Low_complexity Low_complexity 1 42 0 6 759 218 286 53 18 chrX 22891715 22891772 -143758524 - B1_Mur1 SINE Alu -8 141 83 6 759 216 0 0 0 chrX 22893194 22893218 -143757078 + (T)n Simple_repeat Simple_repeat 1 24 0 6 759 2550 45 0 6 chrX 22893394 22893710 -143756586 + L1_Mus1 LINE L1 6253 6566 -1 6 759 212 0 36 0 chrX 22894160 22894188 -143756108 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 6 759 2279 158 15 13 chrX 22894417 22894809 -143755487 + ORR1B1 LTR MaLR 2 394 0 6 759 255 290 29 29 chrX 22894839 22894942 -143755354 + MLT1A1 LTR MaLR 293 395 -13 6 759 309 156 0 45 chrX 22894995 22895062 -143755234 + L1_Mur2 LINE L1 2050 2113 -3764 6 759 300 297 77 81 chrX 22895062 22895271 -143755025 - RLTR31_Mm LTR ERVK 0 561 354 6 759 3346 167 34 50 chrX 22895276 22895556 -143754740 - RLTR17 LTR ERVK -23 669 387 6 759 415 0 36 0 chrX 22895556 22895611 -143754685 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 759 3346 167 34 50 chrX 22895611 22895688 -143754608 - RLTR17 LTR ERVK -306 386 300 6 759 1325 75 32 21 chrX 22895688 22895878 -143754418 - B2_Mm1t SINE B2 -1 192 1 6 759 3346 167 34 50 chrX 22895878 22896199 -143754097 - RLTR17 LTR ERVK -393 299 4 6 759 4136 151 37 5 chrX 22896200 22896958 -143753338 + L1_Mur2 LINE L1 2109 2890 -2987 6 759 329 294 109 0 chrX 22897013 22897105 -143753191 + PB1D9 SINE Alu 10 111 -9 6 759 195 42 0 0 chrX 22897155 22897179 -143753117 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 6 759 963 204 73 59 chrX 22897184 22897471 -143752825 - Lx7 LINE L1 -32 7664 7374 6 759 228 309 15 0 chrX 22897495 22897563 -143752733 + ID4 SINE ID 2 70 -13 6 759 187 200 100 0 chrX 22898169 22898209 -143752087 - L2a LINE L2 -5 3421 3378 6 759 416 288 31 82 chrX 22898471 22898630 -143751666 - MER5A1 DNA MER1_type 0 166 16 6 759 454 281 39 0 chrX 22899012 22899140 -143751156 + ORR1D2 LTR MaLR 1 133 -241 6 759 423 0 0 0 chrX 22899160 22899207 -143751089 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 759 1055 65 0 0 chrX 22899219 22899358 -143750938 - B2_Mm2 SINE B2 -56 139 1 6 759 944 281 41 12 chrX 22899358 22899598 -143750698 + ORR1D2 LTR MaLR 122 368 -2 6 759 405 102 0 0 chrX 22899781 22899840 -143750456 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 6 759 212 270 13 63 chrX 22899929 22900008 -143750288 + B1_Mus1 SINE Alu 32 106 -42 6 759 353 40 40 0 chrX 22900041 22900091 -143750205 + (CAAAAA)n Simple_repeat Simple_repeat 2 53 0 6 759 779 154 8 4 chrX 22900293 22900436 -143749860 - Lx4A LINE L1 -253 6720 6579 6 759 22 35 0 0 chrX 22900443 22900472 -143749824 + AT_rich Low_complexity Low_complexity 1 29 0 6 759 309 244 62 25 chrX 22900645 22900725 -143749571 + RSINE1 SINE B4 77 159 -6 6 759 22 56 0 0 chrX 22900746 22900782 -143749514 + AT_rich Low_complexity Low_complexity 1 36 0 6 759 6303 41 1 0 chrX 22901543 22902301 -143747995 - L1Md_F2 LINE L1 0 6582 5824 6 759 240 35 0 0 chrX 22902444 22902473 -143747823 + (CAT)n Simple_repeat Simple_repeat 1 29 0 6 759 8094 83 21 20 chrX 22902584 22904501 -143745795 + L1_Mus1 LINE L1 4677 6567 0 6 759 26 50 0 0 chrX 22904772 22904812 -143745484 + AT_rich Low_complexity Low_complexity 1 40 0 6 759 21 0 0 0 chrX 22905092 22905113 -143745183 + AT_rich Low_complexity Low_complexity 1 21 0 6 759 869 249 10 16 chrX 22905378 22905570 -143744726 - B3 SINE B2 -25 191 1 6 759 242 260 68 14 chrX 22905634 22905708 -143744588 - ID4_ SINE ID 0 83 6 6 759 4209 150 77 5 chrX 22906087 22906988 -143743308 + L1Md_F LINE L1 273 1205 -5519 6 759 7687 77 1 3 chrX 22907014 22908041 -143742255 + L1_Mm LINE L1 4854 5878 -5 6 759 3654 50 0 19 chrX 22908041 22908508 -143741788 + L1Md_F2 LINE L1 6125 6582 0 6 759 5756 72 26 0 chrX 22908508 22909366 -143740930 + L1Md_F LINE L1 1183 2067 -3816 6 759 1706 100 0 30 chrX 22909408 22909677 -143740619 + L1Md_F2 LINE L1 6322 6582 0 6 759 392 299 40 46 chrX 22909682 22909833 -143740463 + B3A SINE B2 25 174 -24 6 759 378 0 0 0 chrX 22909852 22909894 -143740402 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 759 22 0 0 0 chrX 22910498 22910520 -143739776 + AT_rich Low_complexity Low_complexity 1 22 0 6 759 312 309 0 12 chrX 22911040 22911122 -143739174 + ID4_ SINE ID 1 81 -2 6 759 671 131 25 133 chrX 22911122 22911275 -143739021 + B1_Mus2 SINE Alu 3 138 -9 6 759 282 29 0 0 chrX 22911275 22911310 -143738986 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 759 420 282 188 138 chrX 22911471 22911747 -143738549 - B4 SINE B4 0 292 3 6 759 439 317 73 8 chrX 22911920 22912044 -143738252 + RSINE1 SINE B4 2 133 -32 6 759 261 0 0 0 chrX 22912049 22912078 -143738218 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 759 7456 64 48 10 chrX 22912894 22913898 -143736398 - L1_Mus3 LINE L1 -3 6635 5594 6 759 446 315 156 10 chrX 22914123 22914342 -143735954 + L1MDa LINE L1 871 1114 -5519 6 759 342 0 0 0 chrX 22914342 22914380 -143735916 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 759 446 315 156 10 chrX 22914380 22914474 -143735822 + L1MDa LINE L1 1115 1229 -5404 6 759 941 156 31 26 chrX 22914510 22914701 -143735595 + B2_Mm2 SINE B2 2 193 -2 6 759 222 266 304 0 chrX 22914739 22914818 -143735478 + B1F1 SINE Alu 13 115 -34 6 759 401 291 35 60 chrX 22914828 22915113 -143735183 + L1MDa LINE L1 1291 1568 -5065 6 759 391 245 88 54 chrX 22915124 22915271 -143735025 - Tigger7 DNA MER2_type -1 2490 2339 6 759 299 226 0 0 chrX 22915306 22915359 -143734937 + Lx5 LINE L1 6860 6912 -138 6 759 542 278 105 12 chrX 22915449 22915620 -143734676 + B3 SINE B2 29 215 -1 6 759 384 346 29 0 chrX 22915705 22915841 -143734455 - Tigger7 DNA MER2_type -2350 141 2 6 759 837 251 80 51 chrX 22915888 22916261 -143734035 + L1MDa LINE L1 1763 2146 -4487 6 759 246 188 188 0 chrX 22916402 22916466 -143733830 - L1_Mur3 LINE L1 -7596 116 41 7 759 292 283 174 8 chrX 22916568 22916689 -143733607 - B1F2 SINE Alu -8 141 1 7 759 558 0 0 0 chrX 22916763 22916825 -143733471 + (TA)n Simple_repeat Simple_repeat 2 63 0 7 759 459 267 252 24 chrX 22916825 22916996 -143733300 - ID_B1 SINE B4 -12 212 3 7 759 7731 143 28 31 chrX 22917047 22918535 -143731761 + L1_Mur3 LINE L1 3008 4490 -1390 7 759 1239 175 125 11 chrX 22918533 22918805 -143731491 + L1_Mur3 LINE L1 4651 4953 -927 7 759 1084 322 97 77 chrX 22918852 22919636 -143730660 + RMER13A LTR ERVK 21 820 -40 7 759 750 106 145 28 chrX 22919695 22919840 -143730456 + L1_Mur3 LINE L1 4998 5159 -721 7 759 1580 168 11 10 chrX 22919815 22920162 -143730134 + L1_Mur3 LINE L1 5522 5869 -11 7 759 1993 226 172 26 chrX 22920163 22920599 -143729697 + Lx6 LINE L1 6795 7284 -176 7 759 183 42 0 0 chrX 22920599 22920623 -143729673 + (TTATA)n Simple_repeat Simple_repeat 5 28 0 7 759 1993 226 172 26 chrX 22920623 22920762 -143729534 + Lx6 LINE L1 7285 7454 -6 7 759 320 216 0 0 chrX 22921243 22921294 -143729002 + B4A SINE B4 240 290 -2 7 759 686 292 26 0 chrX 22921621 22921813 -143728483 + B3 SINE B2 14 210 -6 7 759 349 351 61 0 chrX 22922116 22922230 -143728066 + B1F SINE Alu 2 122 -27 7 759 210 37 0 0 chrX 22922761 22922788 -143727508 + (CAAAAA)n Simple_repeat Simple_repeat 5 31 0 7 759 432 0 0 0 chrX 22923281 22923329 -143726967 + (TC)n Simple_repeat Simple_repeat 1 48 0 7 759 270 345 126 46 chrX 22923591 22924028 -143726268 - L2c LINE L2 0 3387 2916 7 759 298 403 28 7 chrX 22924571 22924716 -143725580 + MLT1J LTR MaLR 82 229 -283 7 759 1259 162 13 26 chrX 22925448 22925676 -143724620 - URR1B DNA MER1_type 0 225 1 7 759 492 186 10 30 chrX 22926857 22926957 -143723339 + B1F2 SINE Alu 48 145 -4 7 759 228 67 0 0 chrX 22927036 22927066 -143723230 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 7 759 826 204 0 7 chrX 22927067 22927215 -143723081 - B1_Mur2 SINE Alu -2 147 1 7 759 490 296 91 7 chrX 22927288 22927431 -143722865 + B3 SINE B2 5 159 -57 7 759 384 362 52 21 chrX 22927579 22927771 -143722525 + MIR SINE MIR 37 234 -28 7 759 27 0 0 0 chrX 22927999 22928026 -143722270 + AT_rich Low_complexity Low_complexity 1 27 0 7 759 195 220 0 0 chrX 22928208 22928258 -143722038 + CT-rich Low_complexity Low_complexity 3 52 0 7 759 879 185 0 0 chrX 22928296 22928442 -143721854 - B1_Mur4 SINE Alu 0 150 5 7 759 216 122 0 0 chrX 22928542 22928583 -143721713 + (TA)n Simple_repeat Simple_repeat 2 42 0 7 759 26 50 0 0 chrX 22928608 22928648 -143721648 + AT_rich Low_complexity Low_complexity 1 40 0 7 759 642 200 0 0 chrX 22928929 22929039 -143721257 + B3A SINE B2 1 110 -88 7 759 282 116 0 0 chrX 22929051 22929094 -143721202 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 759 560 328 16 11 chrX 22929210 22929401 -143720895 + B3A SINE B2 1 192 -6 7 759 207 0 0 0 chrX 22929444 22929467 -143720829 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 759 386 313 6 75 chrX 22930045 22930062 -143720234 + B1F2 SINE Alu 1 17 -132 7 759 3382 36 77 2 chrX 22930062 22930504 -143719792 + IAPLTR2_Mm LTR ERVK 1 475 0 7 759 386 313 6 75 chrX 22930504 22930645 -143719651 + B1F2 SINE Alu 18 148 -1 7 759 1032 77 0 47 chrX 22930743 22930892 -143719404 - B1_Mus1 SINE Alu 0 148 7 7 759 311 321 34 95 chrX 22930924 22931072 -143719224 - MIRb SINE MIR -120 148 7 7 759 704 252 0 7 chrX 22932172 22932312 -143717984 + B3 SINE B2 3 141 -75 7 759 1060 158 117 19 chrX 22932425 22932631 -143717665 - URR1A DNA MER1_type 0 226 1 7 759 9108 131 23 44 chrX 22932646 22932844 -143717452 + Lx4A LINE L1 5545 5753 -1305 7 759 1042 83 14 0 chrX 22932844 22932989 -143717307 + B1_Mus2 SINE Alu 1 147 0 7 759 9108 118 21 55 chrX 22932989 22934340 -143715956 + Lx4A LINE L1 5754 7054 -4 7 759 399 98 0 0 chrX 22934340 22934401 -143715895 + (GA)n Simple_repeat Simple_repeat 1 61 0 7 759 3007 35 3 8 chrX 22934621 22934991 -143715305 + L1Md_F2 LINE L1 6211 6578 -4 7 759 483 216 78 0 chrX 22935129 22935245 -143715051 - Lx5 LINE L1 0 7050 6926 7 759 387 335 52 5 chrX 22935980 22936172 -143714124 - MER46C DNA MER2_type -1 337 137 7 759 329 335 62 11 chrX 22936300 22936478 -143713818 - MIR SINE MIR -68 194 8 7 759 1185 174 52 162 chrX 22936917 22937375 -143712921 + RMER17C LTR ERVK 1 408 -2 7 760 278 230 186 20 chrX 22937703 22937805 -143712491 - PB1D9 SINE Alu 0 120 2 7 760 434 216 54 67 chrX 22938235 22938384 -143711912 - B1_Mur3 SINE Alu 0 149 3 7 760 234 0 0 0 chrX 22938399 22938425 -143711871 + (A)n Simple_repeat Simple_repeat 1 26 0 7 760 606 277 80 67 chrX 22938552 22938962 -143711334 - Ricksha_c DNA MuDR -1164 884 418 7 760 227 290 0 28 chrX 22938962 22939033 -143711263 - MLT2B5 LTR ERVL -646 71 3 7 760 320 269 93 41 chrX 22939579 22939676 -143710620 + ID_B1 SINE B4 105 206 -18 7 760 701 192 0 46 chrX 22940002 22940155 -143710141 - B1_Mur4 SINE Alu -4 146 1 7 760 208 333 69 43 chrX 22942851 22942967 -143707329 - MIR SINE MIR -142 120 2 7 760 25 0 0 0 chrX 22943027 22943052 -143707244 + AT_rich Low_complexity Low_complexity 1 25 0 7 760 458 258 15 205 chrX 22943197 22943307 -143706989 + RSINE1 SINE B4 4 102 -63 7 760 405 0 0 0 chrX 22943307 22943352 -143706944 + (TTA)n Simple_repeat Simple_repeat 1 45 0 7 760 4969 135 84 13 chrX 22943353 22944266 -143706030 - Lx3C LINE L1 -11 6965 5988 7 760 458 258 15 205 chrX 22944266 22944353 -143705943 + RSINE1 SINE B4 103 165 0 7 760 180 0 0 0 chrX 22944372 22944392 -143705904 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 7 760 9748 152 66 13 chrX 22944868 22946605 -143703691 + MERVL_2A-int LTR ERVL 85 1912 -3849 7 760 381 244 153 56 chrX 22946606 22946895 -143703401 + L1ME2 LINE L1 5670 5989 -175 7 760 4508 118 6 5 chrX 22947265 22947937 -143702359 - Lx3B LINE L1 0 6973 6301 7 760 252 381 0 2 chrX 22948344 22948421 -143701875 + PB1 SINE Alu 1 66 -61 7 760 224 227 0 0 chrX 22948574 22948618 -143701678 + T-rich Low_complexity Low_complexity 2 45 0 7 760 523 175 169 31 chrX 22948628 22948758 -143701538 - B1_Mur2 SINE Alu 0 149 2 7 760 308 254 122 65 chrX 22948639 22948778 -143701518 - B4 SINE B4 -73 219 73 7 760 266 305 12 12 chrX 22949110 22949193 -143701103 - ID4_ SINE ID 0 83 1 7 760 219 311 139 62 chrX 22949245 22949389 -143700907 + MIRc SINE MIR 68 222 -46 7 760 230 176 118 0 chrX 22949426 22949477 -143700819 - BC1_Mm scRNA scRNA -82 70 14 7 760 274 286 13 13 chrX 22950063 22950141 -143700155 + ID4_ SINE ID 2 79 -4 7 760 378 241 17 8 chrX 22950175 22950292 -143700004 + Lx7 LINE L1 4358 4475 -1405 7 760 3248 29 29 0 chrX 22950316 22950701 -143699595 + MTA_Mm LTR MaLR 1 396 0 7 760 2875 69 0 5 chrX 22950701 22951094 -143699202 + MTA_Mm-int LTR MaLR 1 391 -707 7 760 6972 40 20 2 chrX 22951094 22951960 -143698336 + L1Md_F2 LINE L1 5702 6582 0 7 760 3638 157 29 7 chrX 22951961 22952764 -143697532 + L1VL4 LINE L1 744 1563 -1996 7 760 13783 157 32 17 chrX 22952754 22956397 -143693899 + Lx3C LINE L1 3288 6974 -2 7 760 1844 303 44 41 chrX 22956396 22957371 -143692925 + Lx7 LINE L1 4602 5579 -301 7 760 458 284 69 86 chrX 22957377 22957607 -143692689 + Lx8 LINE L1 6830 7055 -641 7 760 442 276 86 54 chrX 22957743 22958023 -143692273 + L1_Mur3 LINE L1 5163 5451 -429 7 760 1066 51 0 55 chrX 22958029 22958174 -143692122 + B1_Mus1 SINE Alu 3 139 -9 7 760 282 73 0 0 chrX 22958178 22958219 -143692077 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 7 760 1010 228 44 5 chrX 22958228 22958509 -143691787 + Lx7 LINE L1 5644 5960 -1684 7 760 506 262 62 87 chrX 22958848 22959090 -143691206 + Lx8 LINE L1 6129 6364 -1109 7 760 672 319 47 65 chrX 22959134 22959456 -143690840 + MT2A LTR ERVL 69 384 -149 7 760 607 179 101 29 chrX 22959614 22959752 -143690544 + Lx7 LINE L1 7047 7194 -450 7 760 541 230 26 17 chrX 22959824 22959939 -143690357 - Lx8 LINE L1 -820 6653 6538 7 760 241 259 0 58 chrX 22959963 22960049 -143690247 + Lx7 LINE L1 7330 7410 -234 7 760 246 62 0 0 chrX 22960051 22960083 -143690213 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 760 402 57 0 0 chrX 22960122 22960175 -143690121 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 760 423 0 0 0 chrX 22960175 22960221 -143690075 + (GA)n Simple_repeat Simple_repeat 2 48 0 7 760 306 0 0 0 chrX 22960261 22960295 -143690001 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 760 468 0 0 0 chrX 22960296 22960348 -143689948 + (GA)n Simple_repeat Simple_repeat 1 52 0 7 760 723 306 65 34 chrX 22960365 22960659 -143689637 + Lx8 LINE L1 7169 7471 -2 7 760 897 288 47 27 chrX 22960667 22960741 -143689555 + L1MA5A LINE L1 5478 5546 -751 7 760 1649 197 53 17 chrX 22960741 22961102 -143689194 + ORR1D1 LTR MaLR 1 374 0 7 760 897 288 47 27 chrX 22961102 22961431 -143688865 + L1MA5A LINE L1 5547 5889 -408 7 760 225 360 81 65 chrX 22962170 22962479 -143687817 - L2a LINE L2 -86 3340 3027 7 760 341 193 30 9 chrX 22963374 22963469 -143686827 - L1MB3 LINE L1 -261 5907 5813 7 760 309 304 25 67 chrX 22963554 22963575 -143686721 - B1_Mur2 SINE Alu -29 120 103 7 760 275 85 21 0 chrX 22963575 22963622 -143686674 + (ATG)n Simple_repeat Simple_repeat 3 50 0 7 760 340 304 25 67 chrX 22963622 22963720 -143686576 - PB1D10 SINE Alu -47 102 6 7 760 181 338 86 49 chrX 22963974 22964136 -143686160 + MIR SINE MIR 46 213 -49 7 760 252 0 0 0 chrX 22964429 22964457 -143685839 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 760 1804 247 2 19 chrX 22964500 22964929 -143685367 + Lx9 LINE L1 6727 7148 -496 7 760 260 303 15 0 chrX 22964936 22965002 -143685294 - MLT1G1 LTR MaLR -327 252 186 7 760 862 262 79 46 chrX 22965539 22965867 -143684429 + MLT1B LTR MaLR 51 389 -1 7 760 8189 46 2 0 chrX 22966570 22967972 -143682324 - L1Md_F2 LINE L1 -12 6570 5167 7 760 549 277 13 25 chrX 22967973 22968132 -143682164 + Lx8 LINE L1 6845 7001 -472 7 760 634 306 55 30 chrX 22968135 22968465 -143681831 + Lx8 LINE L1 7135 7472 -1 7 760 233 220 68 0 chrX 22968675 22968734 -143681562 - MLT2C2 LTR ERVL -2 557 495 7 760 270 370 38 30 chrX 22968992 22969123 -143681173 - ORR1E LTR MaLR -213 146 15 8 760 2526 150 88 89 chrX 22969169 22969240 -143681056 - RMER4B LTR ERVK 0 585 511 8 760 321 223 11 11 chrX 22969240 22969335 -143680961 + Lx4A LINE L1 6956 7050 -8 8 760 2526 150 88 89 chrX 22969335 22969625 -143680671 - RMER4B LTR ERVK -75 510 235 8 760 2817 50 3 6 chrX 22969625 22969987 -143680309 - L1_Mus2 LINE L1 0 6566 6206 8 760 2526 150 88 89 chrX 22969987 22970194 -143680102 - RMER4B LTR ERVK -351 234 19 8 760 607 224 55 46 chrX 22970209 22970467 -143679829 - L1M2 LINE L1 -1527 4616 4364 8 760 582 107 260 41 chrX 22970434 22970538 -143679758 - Lx LINE L1 -938 6070 6005 8 760 198 0 0 0 chrX 22970538 22970560 -143679736 + (CCCA)n Simple_repeat Simple_repeat 2 23 0 8 760 780 167 13 14 chrX 22970560 22970717 -143679579 - Lx LINE L1 -1004 6004 5859 8 760 5582 139 27 6 chrX 22970710 22971609 -143678687 - Lx LINE L1 -181 6473 5583 8 760 885 254 31 33 chrX 22971622 22971981 -143678315 - L1M2 LINE L1 -1729 4414 4057 8 760 941 279 116 18 chrX 22971977 22972476 -143677820 + L1MA5 LINE L1 4732 5279 -864 8 760 1847 262 92 25 chrX 22972598 22973476 -143676820 + L1MA5 LINE L1 5287 6277 -26 8 760 40 41 0 26 chrX 22973488 22973511 -143676785 + AT_rich Low_complexity Low_complexity 1 23 0 8 760 828 273 5 37 chrX 22973511 22973728 -143676568 - B3 SINE B2 -6 210 1 8 760 40 41 0 26 chrX 22973728 22973780 -143676516 + AT_rich Low_complexity Low_complexity 1 51 0 8 760 1973 277 53 45 chrX 22973781 22974016 -143676280 - L1MB2 LINE L1 -3 6168 5938 8 760 1007 172 136 0 chrX 22974016 22974214 -143676082 - URR1A DNA MER1_type 0 226 2 8 760 1973 277 53 45 chrX 22974214 22974471 -143675825 - L1MB2 LINE L1 -234 5937 5676 8 760 820 111 32 71 chrX 22974471 22974626 -143675670 - B1_Mur2 SINE Alu 0 149 1 8 760 1973 251 117 39 chrX 22974626 22975524 -143674772 - L1MB2 LINE L1 -496 5675 4713 8 760 386 288 142 30 chrX 22976852 22977049 -143673247 + MER112 DNA MER1_type 7 225 -36 8 760 2631 86 0 65 chrX 22977760 22978158 -143672138 - L1_Mus1 LINE L1 -1 6566 6195 8 760 347 304 34 61 chrX 22979628 22979775 -143670521 + L2a LINE L2 3283 3425 -1 8 760 521 342 36 25 chrX 22980064 22980340 -143669956 - Lx8 LINE L1 -123 7350 7072 8 760 348 346 75 106 chrX 22980372 22980692 -143669604 - ORR1E LTR MaLR -49 310 1 8 760 854 288 40 7 chrX 22980692 22981011 -143669285 - ORR1E-int LTR MaLR -53 1527 1026 8 760 255 329 36 12 chrX 22982350 22982433 -143667863 + B3A SINE B2 2 86 -112 8 760 28 29 0 0 chrX 22982502 22982537 -143667759 + AT_rich Low_complexity Low_complexity 1 35 0 8 760 406 264 85 54 chrX 22982743 22982759 -143667537 - CYRA11_Mm Unknown Y-chromosome -242 375 306 8 760 940 200 6 0 chrX 22982759 22982934 -143667362 + URR1A DNA MER1_type 49 224 -2 8 760 406 264 85 54 chrX 22982934 22982967 -143667329 - CYRA11_Mm Unknown Y-chromosome -242 305 145 8 760 318 184 0 0 chrX 22983620 22983696 -143666600 + (CA)n Simple_repeat Simple_repeat 2 77 0 8 760 343 234 9 113 chrX 22984212 22984318 -143665978 + MT2B LTR ERVL 163 257 -344 8 760 549 260 16 8 chrX 22984234 22984362 -143665934 + B1_Mus2 SINE Alu 18 146 -1 8 760 1209 213 189 27 chrX 22984497 22984873 -143665423 + Lx9 LINE L1 7206 7642 -2 8 760 348 308 87 11 chrX 22985970 22986163 -143664133 - MIR SINE MIR -44 224 11 8 760 287 297 105 105 chrX 22987288 22987555 -143662741 + L2a LINE L2 2364 2630 -789 8 760 317 380 0 9 chrX 22987638 22987752 -143662544 + PB1D10 SINE Alu 3 115 -2 8 760 346 243 0 13 chrX 22987768 22987843 -143662453 + ID4 SINE ID 10 83 0 8 760 365 369 97 7 chrX 22987977 22988266 -143662030 + L2a LINE L2 2996 3310 -116 8 760 328 369 78 29 chrX 22988272 22988515 -143661781 + ORR1E LTR MaLR 4 258 -101 8 760 296 242 71 40 chrX 22988567 22988666 -143661630 + ORR1E LTR MaLR 278 379 0 8 760 255 261 17 79 chrX 22988683 22988798 -143661498 + L2a LINE L2 3274 3401 -25 8 760 269 358 0 0 chrX 22989469 22989550 -143660746 + ID2 SINE ID 3 83 0 8 760 222 191 0 41 chrX 22990922 22990971 -143659325 + CT-rich Low_complexity Low_complexity 2 48 0 8 760 230 335 102 74 chrX 22990975 22991339 -143658957 + MER102c DNA MER1_type 129 521 -1907 8 760 476 342 108 17 chrX 22991369 22991666 -143658630 - MLT1D LTR MaLR -181 324 1 8 760 279 173 0 0 chrX 22991878 22991930 -143658366 + (TTTA)n Simple_repeat Simple_repeat 4 55 0 8 760 228 182 0 0 chrX 22991964 22992008 -143658288 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 8 760 648 292 10 10 chrX 22992016 22992210 -143658086 + Lx8 LINE L1 6949 7142 -331 8 760 319 306 9 44 chrX 22992329 22992442 -143657854 + PB1D7 SINE Alu 12 120 0 8 760 270 360 28 35 chrX 22994192 22994336 -143655960 - MIR3 SINE MIR -43 165 23 8 760 1180 160 49 53 chrX 22995281 22995506 -143654790 - URR1B DNA MER1_type -1 224 1 8 760 662 82 10 0 chrX 22995588 22995686 -143654610 + (GA)n Simple_repeat Simple_repeat 2 100 0 8 760 367 297 0 35 chrX 22995720 22995835 -143654461 + MIRb SINE MIR 46 156 -112 8 760 331 344 0 11 chrX 22995841 22995935 -143654361 + MER21B LTR ERV1 2 94 -769 8 760 365 306 95 88 chrX 22996225 22996508 -143653788 + MER21B LTR ERV1 443 727 -136 8 760 1003 302 16 16 chrX 22996507 22996763 -143653533 + B4A SINE B4 33 288 -4 8 760 294 278 44 11 chrX 22996917 22997008 -143653288 - MTEb LTR MaLR -7 372 279 8 760 235 323 42 31 chrX 22997261 22997357 -143652939 - MTEb LTR MaLR -262 97 1 8 760 1384 249 41 19 chrX 22997470 22997839 -143652457 + MTEa LTR MaLR 1 377 -2 8 760 261 307 102 45 chrX 22998295 22998452 -143651844 + LTR90A LTR LTR 811 976 0 8 760 187 417 9 9 chrX 22999885 22999994 -143650302 - L4 LINE RTE -563 1466 1358 8 760 378 0 0 0 chrX 23000240 23000282 -143650014 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 760 486 319 111 5 chrX 23000740 23000957 -143649339 - MIR SINE MIR -21 241 2 2 760 461 56 28 0 chrX 23001368 23001440 -143648856 + (TTTTG)n Simple_repeat Simple_repeat 2 75 0 3 760 6040 49 9 1 chrX 23001628 23002379 -143647917 + L1Md_F2 LINE L1 5822 6578 -4 4 760 605 282 0 35 chrX 23003216 23003385 -143646911 + RSINE1 SINE B4 3 165 0 5 760 23 54 0 0 chrX 23003438 23003475 -143646821 + AT_rich Low_complexity Low_complexity 1 37 0 6 760 30972 96 12 8 chrX 23003706 23007599 -143642697 + L1Md_F2 LINE L1 373 4278 -1605 7 760 1040 106 0 0 chrX 23007599 23007741 -143642555 + B1_Mus1 SINE Alu 2 143 -5 8 760 30972 88 2 4 chrX 23007741 23009045 -143641251 + L1Md_F2 LINE L1 4279 5586 -297 7 760 7777 63 2 19 chrX 23009046 23010055 -143640241 + L1Md_F2 LINE L1 5588 6582 0 7 760 4908 111 100 10 chrX 23010146 23010923 -143639373 + Lx2 LINE L1 6146 6992 -5 9 760 227 213 0 21 chrX 23011204 23011252 -143639044 - L1_Mur1 LINE L1 -765 5121 5075 1 760 7315 85 14 16 chrX 23011251 23012287 -143638009 + L1_Mus4 LINE L1 5601 6634 -2 1 760 696 265 56 0 chrX 23014091 23014253 -143636043 + B3 SINE B2 6 176 -40 1 760 671 289 15 31 chrX 23014415 23014693 -143635603 + L1MA5 LINE L1 5657 5932 -368 1 760 786 272 44 19 chrX 23014896 23015067 -143635229 + B3 SINE B2 1 180 -36 1 760 2304 161 34 22 chrX 23015067 23015481 -143634815 + MTC LTR MaLR 3 421 0 1 760 786 272 44 19 chrX 23015481 23015515 -143634781 + B3 SINE B2 181 211 -5 1 760 193 333 0 0 chrX 23015581 23015638 -143634658 - MIRm SINE MIR -4 272 216 1 760 535 314 15 19 chrX 23015654 23015914 -143634382 - L1_Mur3 LINE L1 -407 5473 5215 1 760 411 149 0 0 chrX 23015995 23016069 -143634227 + (TG)n Simple_repeat Simple_repeat 1 74 0 1 760 343 213 34 29 chrX 23016072 23016162 -143634134 + B1_Mus2 SINE Alu 20 110 -39 1 760 474 75 0 0 chrX 23016173 23016240 -143634056 + (TG)n Simple_repeat Simple_repeat 1 67 0 2 760 469 331 37 37 chrX 23016433 23016596 -143633700 + RSINE1 SINE B4 3 165 0 2 760 444 19 0 0 chrX 23017550 23017603 -143632693 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 760 234 234 62 0 chrX 23017765 23017829 -143632467 + LTR85c LTR Gypsy? 153 220 -603 2 760 443 323 107 45 chrX 23018133 23018554 -143631742 + L1_Mur3 LINE L1 115 561 -7167 2 760 1507 195 58 106 chrX 23018548 23019131 -143631165 + L1_Mur3 LINE L1 859 1413 -4467 2 760 465 29 0 28 chrX 23019131 23019203 -143631093 + L1Md_F2 LINE L1 6508 6577 -5 2 760 1073 209 25 105 chrX 23019203 23019385 -143630911 + L1_Mur3 LINE L1 1414 1571 -4309 2 760 9020 144 13 31 chrX 23019387 23021038 -143629258 + L1_Mur1 LINE L1 2503 4122 -1764 2 760 7120 119 28 14 chrX 23021037 23022905 -143627391 + L1_Mus4 LINE L1 4743 6636 0 2 760 835 194 40 18 chrX 23022889 23023115 -143627181 + L1_Mur3 LINE L1 1664 1894 -3986 2 760 961 155 0 0 chrX 23023117 23023285 -143627011 + L1_Mm LINE L1 2728 2895 -2988 2 760 3626 174 163 24 chrX 23023282 23024315 -143625981 + L1_Mur3 LINE L1 1884 3059 -2821 2 760 2532 148 19 36 chrX 23024283 23024754 -143625542 + L1_Mur3 LINE L1 4982 5444 -433 2 760 255 333 0 0 chrX 23024817 23024883 -143625413 + PB1 SINE Alu 19 84 -43 2 760 815 298 159 0 chrX 23024934 23025186 -143625110 + B4A SINE B4 1 292 0 3 760 240 355 54 0 chrX 23025336 23025429 -143624867 + MLT1A0 LTR MaLR 251 348 -17 3 760 232 247 55 66 chrX 23025569 23025660 -143624636 - ORR1E LTR MaLR 0 359 270 3 760 358 322 81 17 chrX 23026208 23026382 -143623914 - MIR SINE MIR -11 251 67 3 760 341 352 49 32 chrX 23026940 23027125 -143623171 - MIRb SINE MIR -59 209 22 3 760 225 226 38 0 chrX 23027591 23027644 -143622652 - RMER15 LTR ERVL -96 479 425 3 760 268 203 91 30 chrX 23027708 23027774 -143622522 - Lx8 LINE L1 -250 7223 7154 3 760 287 122 0 39 chrX 23027848 23027899 -143622397 - RLTR20B3 LTR ERVK -103 474 426 3 760 3492 69 4 42 chrX 23027899 23028399 -143621897 - L1Md_F2 LINE L1 -1 6581 6101 3 760 350 310 89 28 chrX 23028488 23028667 -143621629 - Lx8 LINE L1 -250 7223 7034 3 760 180 0 0 0 chrX 23028733 23028753 -143621543 + (CCAA)n Simple_repeat Simple_repeat 4 23 0 4 760 291 285 148 35 chrX 23028766 23028908 -143621388 - MLT1B LTR MaLR -67 323 166 4 760 270 333 56 88 chrX 23029351 23029712 -143620584 + L2b LINE L2 3089 3423 -3 4 760 232 279 59 0 chrX 23029724 23029792 -143620504 + L2b LINE L2 3352 3423 -3 4 760 1473 80 0 0 chrX 23030069 23030268 -143620028 + L1Md_F2 LINE L1 6372 6570 -12 4 760 273 289 134 84 chrX 23031188 23031449 -143618847 + B4 SINE B4 1 274 -18 4 760 1133 75 0 0 chrX 23031498 23031645 -143618651 - B1_Mus2 SINE Alu 0 147 1 4 760 26 88 0 0 chrX 23032191 23032259 -143618037 + AT_rich Low_complexity Low_complexity 1 68 0 4 760 726 217 121 0 chrX 23032770 23032927 -143617369 + B3 SINE B2 3 178 -38 4 760 294 29 0 0 chrX 23032939 23032974 -143617322 + (TAA)n Simple_repeat Simple_repeat 2 36 0 4 760 319 279 0 0 chrX 23032974 23033042 -143617254 + B3A SINE B2 50 117 -81 4 760 2200 158 17 65 chrX 23033131 23033545 -143616751 + ORR1B1 LTR MaLR 1 394 0 5 760 26 0 0 0 chrX 23033860 23033886 -143616410 + AT_rich Low_complexity Low_complexity 1 26 0 5 760 660 289 72 0 chrX 23033896 23034062 -143616234 + B3A SINE B2 20 197 -1 5 760 1623 193 125 34 chrX 23034068 23034475 -143615821 - Lx5 LINE L1 -831 6219 5776 5 760 3822 218 28 20 chrX 23034472 23035290 -143615006 + Lx5 LINE L1 6226 7050 0 5 760 1972 116 69 10 chrX 23035386 23035690 -143614606 - Lx4A LINE L1 -1 7057 6736 5 760 540 282 59 84 chrX 23035788 23036144 -143614152 + L1MC5 LINE L1 6726 7072 -889 5 760 910 162 0 12 chrX 23036202 23036364 -143613932 + Lx7 LINE L1 7530 7689 -7 5 760 4002 234 45 16 chrX 23036373 23037336 -143612960 - Lx7 LINE L1 -740 6956 5966 5 760 6677 26 0 10 chrX 23038491 23039280 -143611016 - L1Md_T LINE L1 -2 6580 5800 5 760 635 322 87 20 chrX 23039460 23039680 -143610616 + Lx8 LINE L1 5929 6167 -1306 5 760 366 107 0 0 chrX 23039680 23039736 -143610560 + (TA)n Simple_repeat Simple_repeat 2 57 0 6 760 635 322 87 20 chrX 23039736 23039917 -143610379 + Lx8 LINE L1 6168 6357 -1116 5 760 558 209 27 0 chrX 23040493 23040603 -143609693 + Lx8 LINE L1 6350 6462 -1011 5 760 3472 80 15 8 chrX 23040739 23041178 -143609118 - L1_Mus3 LINE L1 -511 6127 5690 6 760 3713 73 10 4 chrX 23041178 23041676 -143608620 + L1_Mus3 LINE L1 6126 6626 -12 6 760 3472 80 15 8 chrX 23041676 23041715 -143608581 - L1_Mus3 LINE L1 -949 5689 5646 6 760 1129 257 47 18 chrX 23041700 23041990 -143608306 + Lx8 LINE L1 7038 7332 -141 5 760 1036 114 11 6 chrX 23041990 23042166 -143608130 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 6 760 1129 257 47 18 chrX 23042166 23042196 -143608100 + Lx8 LINE L1 7333 7371 -102 5 760 1218 100 0 0 chrX 23042196 23042376 -143607920 + (GAA)n Simple_repeat Simple_repeat 1 180 0 6 760 1129 257 47 18 chrX 23042376 23042394 -143607902 + Lx8 LINE L1 7372 7387 -86 5 760 3887 37 0 0 chrX 23042415 23042877 -143607419 + L1Md_F2 LINE L1 6109 6570 -12 6 760 282 250 25 33 chrX 23043090 23043210 -143607086 - L1MC5 LINE L1 -437 7524 7406 6 760 243 0 0 0 chrX 23043798 23043825 -143606471 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 6 760 387 0 0 0 chrX 23044238 23044281 -143606015 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 6 760 264 305 97 61 chrX 23045903 23046245 -143604051 + RMER10A LTR ERVL 12 365 -77 6 760 22 56 0 0 chrX 23046578 23046614 -143603682 + AT_rich Low_complexity Low_complexity 1 36 0 6 760 1541 142 27 0 chrX 23046904 23047164 -143603132 + RMER6C LTR ERVK 421 687 -3 7 760 2296 190 19 99 chrX 23047563 23048158 -143602138 - RMER6C LTR ERVK -143 547 1 7 760 335 192 123 0 chrX 23048240 23048313 -143601983 + B1F SINE Alu 45 126 -23 7 760 227 224 78 13 chrX 23049309 23049386 -143600910 + L1M4 LINE L1 5771 5852 -326 7 760 916 177 0 108 chrX 23049494 23049716 -143600580 - ORR1A4 LTR MaLR -131 198 1 7 760 260 341 44 0 chrX 23049850 23049941 -143600355 - RSINE1 SINE B4 -13 152 58 7 760 6641 80 26 2 chrX 23050532 23051444 -143598852 - L1Md_F2 LINE L1 -5 6577 5644 7 760 13176 75 1 2 chrX 23051443 23053190 -143597106 + L1Md_F2 LINE L1 3912 5657 -226 7 760 580 313 75 9 chrX 23054062 23054275 -143596021 - MIRb SINE MIR -8 260 34 7 760 594 41 0 0 chrX 23055084 23055157 -143595139 + (TAGA)n Simple_repeat Simple_repeat 1 73 0 7 760 256 321 65 36 chrX 23055161 23055300 -143594996 + MLT1B LTR MaLR 116 258 -132 7 760 263 282 81 23 chrX 23055405 23055492 -143594804 - MTE2a LTR MaLR -40 379 288 8 760 433 255 79 118 chrX 23055517 23055695 -143594601 - MTE2a LTR MaLR -203 176 6 8 760 273 320 0 39 chrX 23055701 23055779 -143594517 - MER2 DNA MER2_type -15 330 256 8 760 536 307 114 18 chrX 23055782 23056054 -143594242 - MER2 DNA MER2_type -47 298 1 8 760 3250 152 91 29 chrX 23056313 23056963 -143593333 + RMER6C LTR ERVK 1 690 0 8 760 1143 56 0 14 chrX 23057015 23057160 -143593136 + B1_Mus1 SINE Alu 5 147 -1 8 760 282 173 0 0 chrX 23057161 23057236 -143593060 + A-rich Low_complexity Low_complexity 1 75 0 8 760 238 178 151 0 chrX 23057340 23057413 -143592883 + Lx7 LINE L1 7613 7696 0 8 760 785 248 43 38 chrX 23057575 23057785 -143592511 + B3 SINE B2 4 214 -2 8 760 1008 116 40 5 chrX 23057786 23057986 -143592310 - L1_Mur2 LINE L1 -5810 902 696 8 760 1802 186 3 15 chrX 23057988 23058320 -143591976 + Lx4B LINE L1 6724 7051 -7 8 760 282 259 136 0 chrX 23058350 23058431 -143591865 - B2_Mm1t SINE B2 -100 93 2 8 760 1793 244 44 44 chrX 23058697 23059166 -143591130 - RMER5 LTR ERV1 0 534 57 9 760 288 0 0 0 chrX 23059166 23059198 -143591098 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 9 760 1793 244 44 44 chrX 23059198 23059248 -143591048 - RMER5 LTR ERV1 -478 56 15 9 760 1191 262 29 3 chrX 23060029 23060339 -143589957 + Lx8 LINE L1 6917 7234 -239 9 760 22 70 0 0 chrX 23060371 23060414 -143589882 + AT_rich Low_complexity Low_complexity 1 43 0 9 760 4484 113 19 13 chrX 23060445 23061118 -143589178 - Lx3B LINE L1 -5 6968 6292 9 760 498 61 0 0 chrX 23061425 23061491 -143588805 + (TA)n Simple_repeat Simple_repeat 2 67 0 9 760 935 222 39 0 chrX 23062082 23062289 -143588007 - B3 SINE B2 0 216 2 9 760 326 286 37 70 chrX 23062298 23062533 -143587763 - Lx8 LINE L1 -2 7471 7273 9 760 1192 221 114 46 chrX 23062660 23062844 -143587452 - ORR1D1 LTR MaLR 0 374 175 9 760 702 0 0 0 chrX 23062844 23062922 -143587374 + (GA)n Simple_repeat Simple_repeat 2 79 0 9 760 1192 221 114 46 chrX 23062922 23063087 -143587209 - ORR1D1 LTR MaLR -200 174 2 9 760 325 353 109 0 chrX 23063594 23063750 -143586546 + MIRb SINE MIR 40 212 -56 1 760 246 296 49 12 chrX 23064713 23064795 -143585501 - MIRb SINE MIR -29 239 155 1 760 2388 168 174 89 chrX 23065068 23065704 -143584592 + RMER6C LTR ERVK 1 690 0 1 760 33 0 0 0 chrX 23065990 23066023 -143584273 + AT_rich Low_complexity Low_complexity 1 33 0 1 760 280 316 13 0 chrX 23066040 23066116 -143584180 - ID4 SINE ID -5 78 2 1 760 329 324 108 0 chrX 23066126 23066228 -143584068 - PB1 SINE Alu -2 125 13 1 760 977 249 9 9 chrX 23066761 23066976 -143583320 - B3 SINE B2 0 216 2 1 760 351 0 0 0 chrX 23067337 23067376 -143582920 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 760 279 16 45 60 chrX 23067461 23067528 -143582768 + (CAAAAA)n Simple_repeat Simple_repeat 2 67 0 1 760 688 297 63 24 chrX 23067529 23067736 -143582560 - B4 SINE B4 -77 215 1 1 760 233 75 25 0 chrX 23068312 23068352 -143581944 + (CAAAA)n Simple_repeat Simple_repeat 5 45 0 1 760 545 332 70 7 chrX 23068381 23068642 -143581654 - MER47B DNA MER2_type -24 394 70 1 761 203 307 58 19 chrX 23068823 23068926 -143581370 - MIRc SINE MIR -60 208 102 1 761 267 54 0 0 chrX 23068936 23068973 -143581323 + (T)n Simple_repeat Simple_repeat 1 37 0 1 761 276 286 58 52 chrX 23069309 23069464 -143580832 - MIR3 SINE MIR -118 158 3 1 761 564 15 0 0 chrX 23070148 23070213 -143580083 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 761 294 323 141 35 chrX 23070319 23070489 -143579807 - MIRb SINE MIR -53 215 28 1 761 27 0 0 0 chrX 23070578 23070605 -143579691 + AT_rich Low_complexity Low_complexity 1 27 0 1 761 406 321 48 48 chrX 23070613 23070780 -143579516 - MIRb SINE MIR -29 239 73 1 761 277 146 0 0 chrX 23070842 23070883 -143579413 - MER63D DNA AcHobo -5 1056 1016 1 761 808 273 60 39 chrX 23070929 23071211 -143579085 + L1MD2 LINE L1 65 352 -6195 1 761 245 355 89 16 chrX 23071978 23072101 -143578195 - MIRc SINE MIR -135 133 2 1 761 269 350 40 34 chrX 23072944 23073048 -143577248 - MIR SINE MIR -69 193 88 1 761 1058 225 143 9 chrX 23073048 23073376 -143576920 - ORR1D1 LTR MaLR 0 374 3 1 761 269 350 40 34 chrX 23073376 23073419 -143576877 - MIR SINE MIR -175 87 45 1 761 212 231 0 37 chrX 23073910 23073964 -143576332 + (CAGAGA)n Simple_repeat Simple_repeat 3 54 0 1 761 651 252 60 26 chrX 23074450 23074585 -143575711 - L1ME1 LINE L1 -263 5916 5776 1 761 737 239 68 19 chrX 23074585 23074790 -143575506 - B3 SINE B2 0 216 2 1 761 651 252 60 26 chrX 23074790 23074919 -143575377 - L1ME1 LINE L1 -404 5775 5643 1 761 465 323 136 63 chrX 23075384 23075781 -143574515 - Tigger15a DNA TcMar -287 428 3 1 761 23 0 0 0 chrX 23076057 23076080 -143574216 + AT_rich Low_complexity Low_complexity 1 23 0 1 761 243 235 22 56 chrX 23077340 23077430 -143572866 - Lx9 LINE L1 -171 7473 7387 1 761 551 301 69 22 chrX 23077437 23077668 -143572628 + Lx9 LINE L1 6547 6788 -856 1 761 253 272 85 40 chrX 23077865 23078041 -143572255 + L1MC5 LINE L1 7742 7925 -36 1 761 270 0 0 0 chrX 23078605 23078635 -143571661 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 761 480 35 0 0 chrX 23078635 23078692 -143571604 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 761 254 301 23 57 chrX 23078757 23078845 -143571451 - B4 SINE B4 -22 270 186 1 761 669 13 0 0 chrX 23078854 23078932 -143571364 + (TG)n Simple_repeat Simple_repeat 1 78 0 1 761 432 0 0 0 chrX 23078932 23078979 -143571317 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 761 278 242 0 16 chrX 23078982 23079045 -143571251 - B4A SINE B4 -230 62 1 1 761 757 281 3 65 chrX 23079302 23079519 -143570777 + B3A SINE B2 2 214 -2 1 761 1243 234 138 3 chrX 23079529 23079919 -143570377 - Lx9 LINE L1 0 7644 7202 1 761 305 59 22 66 chrX 23079925 23079939 -143570357 + (CAAAA)n Simple_repeat Simple_repeat 2 15 0 1 761 871 174 0 0 chrX 23079939 23080083 -143570213 + B1_Mur4 SINE Alu 5 148 -2 1 761 305 59 22 66 chrX 23080083 23080159 -143570137 + (CAAAA)n Simple_repeat Simple_repeat 1 73 0 1 761 562 282 0 13 chrX 23080523 23080674 -143569622 + B1F1 SINE Alu 1 149 0 1 761 234 179 0 0 chrX 23080676 23080732 -143569564 + A-rich Low_complexity Low_complexity 5 60 0 1 761 26 50 0 0 chrX 23080876 23080916 -143569380 + AT_rich Low_complexity Low_complexity 1 40 0 1 761 1156 108 6 0 chrX 23081067 23081234 -143569062 - URR1A DNA MER1_type 0 226 59 1 761 644 178 154 20 chrX 23081227 23081376 -143568920 - URR1A DNA MER1_type -57 169 1 1 761 186 43 0 0 chrX 23081420 23081443 -143568853 + (TAAAA)n Simple_repeat Simple_repeat 4 26 0 1 761 3111 196 31 19 chrX 23081906 23082582 -143567714 + Lx2B LINE L1 6313 6996 -4 1 761 4303 228 14 8 chrX 23082655 23083536 -143566760 - Lx5 LINE L1 -5 7045 6160 1 761 22 80 0 0 chrX 23083607 23083657 -143566639 + AT_rich Low_complexity Low_complexity 1 50 0 1 761 736 290 0 59 chrX 23083920 23084140 -143566156 + B3 SINE B2 5 211 -5 1 761 432 0 0 0 chrX 23084357 23084405 -143565891 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 761 1158 68 0 22 chrX 23085191 23085372 -143564924 + (TTTTC)n Simple_repeat Simple_repeat 2 178 0 1 761 1184 254 14 17 chrX 23085394 23085690 -143564606 - RMER1B Other Other -15 1051 757 1 761 7741 60 1 6 chrX 23085701 23086981 -143563315 - L1Md_F2 LINE L1 -4 6578 5309 1 761 672 77 0 0 chrX 23087010 23087101 -143563195 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 1 761 283 347 10 0 chrX 23087109 23087207 -143563089 + CT-rich Low_complexity Low_complexity 2 100 0 1 761 690 290 44 58 chrX 23087718 23088011 -143562285 - B4A SINE B4 -1 291 3 1 761 312 316 0 48 chrX 23088022 23088125 -143562171 - MLT1D LTR MaLR -155 350 253 1 761 862 309 10 27 chrX 23088949 23089242 -143561054 + B4A SINE B4 5 292 0 1 761 358 287 90 30 chrX 23089705 23089838 -143560458 + B1_Mm SINE Alu 7 147 0 1 761 299 292 0 14 chrX 23089856 23089929 -143560367 + ID4 SINE ID 12 83 0 1 761 1217 217 49 89 chrX 23091030 23091556 -143558740 + L1M2 LINE L1 4764 5268 -875 1 761 3316 238 76 34 chrX 23091576 23092698 -143557598 + L1_Mur1 LINE L1 3 1171 -5813 1 761 3264 135 316 4 chrX 23093221 23094115 -143556181 + L1_Mur1 LINE L1 1173 2395 -3491 1 761 462 156 0 0 chrX 23094116 23094193 -143556103 - L1M2 LINE L1 -2413 3730 3654 1 761 15782 89 12 25 chrX 23094195 23094384 -143555912 - L1VL4 LINE L1 -284 3275 3123 1 761 1686 70 0 21 chrX 23094384 23094619 -143555677 - L1Md_F2 LINE L1 -12 6570 6341 1 761 15782 93 14 20 chrX 23094619 23097482 -143552814 - L1VL4 LINE L1 -437 3122 242 1 761 4562 104 20 4 chrX 23097481 23098092 -143552204 + L1_Mur1 LINE L1 4652 5271 -615 1 761 216 0 0 0 chrX 23098092 23098116 -143552180 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 761 4562 104 20 4 chrX 23098116 23098217 -143552079 + L1_Mur1 LINE L1 5272 5374 -512 1 761 35360 42 1 33 chrX 23098218 23103625 -143546671 + Lx3B LINE L1 86 5587 -299 1 761 8945 7 0 0 chrX 23103625 23104621 -143545675 + L1Md_T LINE L1 5587 6582 0 1 761 35360 103 11 21 chrX 23104621 23106167 -143544129 + Lx3B LINE L1 5588 6958 -18 1 761 25 0 0 0 chrX 23106188 23106213 -143544083 + AT_rich Low_complexity Low_complexity 1 25 0 1 761 308 281 39 55 chrX 23106286 23106414 -143543882 + L1M2 LINE L1 5333 5458 -901 1 761 1056 262 47 18 chrX 23106499 23106884 -143543412 + L1_Mur3 LINE L1 4022 4417 -1463 1 761 3798 169 26 19 chrX 23106884 23107571 -143542725 - RLTR17 LTR ERVK 0 692 1 1 761 7763 197 80 51 chrX 23107571 23110013 -143540283 - RMER3D-int LTR ERVK 0 2842 1 1 761 2073 170 8 43 chrX 23110013 23110381 -143539915 - RLTR17 LTR ERVK 0 692 338 1 761 950 212 37 153 chrX 23110416 23110879 -143539417 + L1_Mur3 LINE L1 4426 4834 -1046 1 761 388 267 10 10 chrX 23110906 23111008 -143539288 + MTD LTR MaLR 100 201 -218 1 761 1887 206 127 9 chrX 23111010 23111460 -143538836 + RLTR11A LTR ERVK 24 526 -2 1 761 21 57 0 0 chrX 23111636 23111671 -143538625 + AT_rich Low_complexity Low_complexity 1 35 0 1 761 480 318 76 24 chrX 23111686 23111937 -143538359 - L1M4 LINE L1 -1668 4478 4215 1 761 33758 36 1 0 chrX 23111938 23118019 -143532277 + L1Md_T LINE L1 1 5589 -297 1 761 8962 8 0 0 chrX 23118020 23119015 -143531281 + L1Md_T LINE L1 5591 6585 0 1 761 204 167 0 0 chrX 23119047 23119095 -143531201 + A-rich Low_complexity Low_complexity 1 48 0 1 761 344 250 9 99 chrX 23119378 23119489 -143530807 + PB1D10 SINE Alu 17 117 0 1 761 257 345 95 33 chrX 23119549 23119759 -143530537 - L4 LINE RTE -210 1819 1597 1 761 683 163 107 62 chrX 23120117 23120294 -143530002 + B2_Mm2 SINE B2 1 185 -10 1 761 316 236 245 11 chrX 23120551 23120645 -143529651 + B3 SINE B2 15 130 -86 1 761 15141 59 1 1 chrX 23120672 23122705 -143527591 + L1Md_F2 LINE L1 3552 5585 -298 1 761 7994 55 0 1 chrX 23122706 23123689 -143526607 + L1Md_F2 LINE L1 5587 6568 -14 1 761 21 0 0 0 chrX 23123703 23123724 -143526572 + AT_rich Low_complexity Low_complexity 1 21 0 1 761 1235 261 82 24 chrX 23123742 23124327 -143525969 - L1_Mur3 LINE L1 -2163 3717 3099 1 761 312 349 15 0 chrX 23124602 23124734 -143525562 - L1M2 LINE L1 -2990 3153 3020 1 761 495 0 0 0 chrX 23124735 23124790 -143525506 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 761 792 157 0 60 chrX 23124800 23124949 -143525347 + B1_Mur4 SINE Alu 9 148 -2 1 761 674 296 25 0 chrX 23125282 23125441 -143524855 - B3A SINE B2 -35 163 1 1 761 1001 251 92 22 chrX 23125444 23125889 -143524407 - L1MA6 LINE L1 0 6300 5825 1 761 813 222 144 0 chrX 23126149 23126329 -143523967 - B3 SINE B2 -10 206 1 1 761 769 296 11 47 chrX 23126400 23126761 -143523535 + L1MA9 LINE L1 5588 5935 -377 1 761 849 316 27 67 chrX 23127206 23127504 -143522792 - B4A SINE B4 0 292 7 1 761 873 222 156 18 chrX 23127504 23127830 -143522466 - L1MB2 LINE L1 -45 6126 5756 1 761 709 236 0 0 chrX 23128019 23128146 -143522150 + B1_Mur1 SINE Alu 1 127 -22 1 761 261 139 0 0 chrX 23128146 23128189 -143522107 + (TTCTCC)n Simple_repeat Simple_repeat 5 47 0 1 761 817 282 68 86 chrX 23128468 23128616 -143521680 - RMER13A LTR ERVK -406 454 305 1 761 4873 175 22 23 chrX 23128616 23129521 -143520775 + RMER13B LTR ERVK 5 908 0 1 761 817 282 68 86 chrX 23129521 23129814 -143520482 - RMER13A LTR ERVK -556 304 21 1 761 597 295 13 7 chrX 23129871 23130021 -143520275 + RSINE1 SINE B4 3 153 -12 1 761 28 61 0 0 chrX 23130021 23130070 -143520226 + AT_rich Low_complexity Low_complexity 1 49 0 1 761 213 47 45 23 chrX 23130776 23130820 -143519476 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 2 761 3105 162 13 7 chrX 23134855 23135118 -143515178 + L1_Mur2 LINE L1 5023 5288 -589 2 761 2045 86 0 27 chrX 23135118 23135418 -143514878 + L1Md_F2 LINE L1 6278 6569 -13 2 761 3105 162 13 7 chrX 23135418 23135749 -143514547 + L1_Mur2 LINE L1 5289 5621 -256 2 761 2310 267 116 6 chrX 23135865 23136667 -143513629 + Lx8 LINE L1 6583 7472 -1 2 761 203 371 52 0 chrX 23137543 23137640 -143512656 - MIRm SINE MIR -161 115 14 2 761 489 212 101 0 chrX 23137956 23138055 -143512241 - B1_Mur2 SINE Alu -8 141 33 2 761 387 145 0 0 chrX 23138107 23138176 -143512120 + (TA)n Simple_repeat Simple_repeat 1 69 0 2 761 210 254 17 0 chrX 23138338 23138397 -143511899 + CT-rich Low_complexity Low_complexity 1 60 0 2 761 2040 89 14 116 chrX 23138769 23139025 -143511271 - ORR1A2 LTR MaLR -8 319 66 2 761 4078 7 0 0 chrX 23139025 23139477 -143510819 - L1Md_T LINE L1 0 6582 6131 2 761 2040 89 14 116 chrX 23139477 23139574 -143510722 - ORR1A2 LTR MaLR -262 65 2 2 761 1411 138 9 5 chrX 23139676 23139895 -143510401 - URR1B DNA MER1_type -5 220 1 2 761 26 0 0 0 chrX 23140227 23140253 -143510043 + AT_rich Low_complexity Low_complexity 1 26 0 2 761 9241 12 0 1 chrX 23140950 23142796 -143507500 - L1Md_T LINE L1 0 6582 4772 2 761 351 273 129 0 chrX 23143183 23143315 -143506981 + B1_Mur1 SINE Alu 1 149 0 2 761 627 144 0 0 chrX 23143315 23143426 -143506870 + (GA)n Simple_repeat Simple_repeat 1 111 0 2 761 341 271 151 13 chrX 23143566 23143745 -143506551 - MIR SINE MIR -58 204 2 2 761 784 0 21 0 chrX 23143851 23143947 -143506349 + (TAGA)n Simple_repeat Simple_repeat 1 98 0 2 761 717 90 0 0 chrX 23144303 23144414 -143505882 + (TC)n Simple_repeat Simple_repeat 2 112 0 2 761 360 0 0 0 chrX 23144414 23144453 -143505843 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 761 506 261 13 7 chrX 23145367 23145521 -143504775 - Lx8 LINE L1 -204 7269 7115 2 761 196 149 43 0 chrX 23145554 23145601 -143504695 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 2 761 315 0 0 0 chrX 23145605 23145640 -143504656 + (TATG)n Simple_repeat Simple_repeat 2 36 0 2 761 278 333 69 50 chrX 23145844 23146046 -143504250 + MLT2B5 LTR ERVL 116 321 -396 2 761 1114 302 34 48 chrX 23145886 23146244 -143504052 + MTEa LTR MaLR 27 379 0 2 761 8404 112 27 13 chrX 23146642 23146733 -143503563 - Lx3B LINE L1 -5 6968 6876 2 761 197 33 33 0 chrX 23146733 23146763 -143503533 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 761 8404 112 27 13 chrX 23146763 23148025 -143502271 - Lx3B LINE L1 -98 6875 5595 2 761 578 275 7 14 chrX 23148264 23148404 -143501892 - B1F1 SINE Alu 0 149 11 2 761 351 314 102 13 chrX 23148512 23148673 -143501623 + MIRb SINE MIR 9 173 -89 2 761 258 412 89 15 chrX 23148927 23149186 -143501110 - LTR16E2 LTR ERVL -75 493 216 2 761 325 313 184 15 chrX 23149210 23149482 -143500814 + L2 LINE L2 1966 2283 -1136 2 761 225 123 53 0 chrX 23149705 23149762 -143500534 - Lx9 LINE L1 -1 7643 7584 2 761 3296 193 70 26 chrX 23149762 23150505 -143499791 + RMER13B LTR ERVK 124 899 -9 2 761 2441 233 30 14 chrX 23150505 23151166 -143499130 - Lx9 LINE L1 -171 7473 6802 2 761 1970 248 72 18 chrX 23151181 23151781 -143498515 - Lx2B LINE L1 0 7000 6369 2 761 7025 30 6 0 chrX 23151783 23152656 -143497640 - L1Md_F3 LINE L1 -14 6570 5693 2 761 3174 171 12 20 chrX 23152652 23153303 -143496993 - Lx2B LINE L1 -625 6375 5730 2 761 1099 185 10 0 chrX 23153301 23153501 -143496795 - Lx9 LINE L1 -846 6798 6597 2 761 1088 200 4 59 chrX 23153923 23154075 -143496221 + URR1A DNA MER1_type 1 144 -82 2 761 1194 62 7 0 chrX 23154075 23154221 -143496075 - B1_Mus2 SINE Alu 0 147 1 2 761 1088 200 4 59 chrX 23154221 23154307 -143495989 + URR1A DNA MER1_type 145 226 0 2 761 854 223 45 0 chrX 23154668 23154870 -143495426 - ORR1C1 LTR MaLR 0 384 174 2 761 225 0 0 0 chrX 23154870 23154895 -143495401 + (GA)n Simple_repeat Simple_repeat 1 25 0 2 761 567 43 0 0 chrX 23154895 23154965 -143495331 + (GGGAA)n Simple_repeat Simple_repeat 5 74 0 2 761 295 247 0 0 chrX 23154969 23155066 -143495230 + (CAGA)n Simple_repeat Simple_repeat 2 98 0 2 761 1172 133 11 5 chrX 23155070 23155259 -143495037 - ORR1C1 LTR MaLR -188 190 1 2 761 22 0 0 0 chrX 23156162 23156184 -143494112 + AT_rich Low_complexity Low_complexity 1 22 0 2 761 1076 117 6 0 chrX 23156819 23156982 -143493314 - Lx3A LINE L1 -457 6524 6361 2 761 1189 77 0 0 chrX 23156980 23157148 -143493148 + L1_Mm LINE L1 5210 5377 -506 2 761 647 99 0 0 chrX 23157146 23157247 -143493049 - L1_Mur1 LINE L1 -2274 3612 3512 2 761 1620 152 3 21 chrX 23157247 23157530 -143492766 + Lx3A LINE L1 6697 6974 -7 2 761 1046 257 68 18 chrX 23157583 23157979 -143492317 + L1MC LINE L1 4402 4817 -1329 2 761 469 173 0 36 chrX 23157979 23158063 -143492233 + ID4 SINE ID 1 81 -2 2 761 469 286 10 45 chrX 23158147 23158280 -143492016 + B1_Mur1 SINE Alu 9 143 -6 2 761 284 302 11 19 chrX 23158299 23158389 -143491907 - ID4 SINE ID -58 94 5 2 761 523 145 0 0 chrX 23158464 23158547 -143491749 + ORR1B1 LTR MaLR 311 393 -1 2 761 435 284 97 0 chrX 23158550 23158705 -143491591 + L1MC1 LINE L1 6074 6243 -90 2 761 21 36 0 0 chrX 23159195 23159223 -143491073 + AT_rich Low_complexity Low_complexity 1 28 0 2 761 3117 69 0 28 chrX 23159268 23159730 -143490566 - L1_Mus3 LINE L1 -519 6119 5671 2 761 32651 58 2 1 chrX 23159738 23164663 -143485633 + L1Md_A LINE L1 233 5526 -357 2 761 2260 115 224 26 chrX 23164663 23165128 -143485168 - RLTR6_Mm LTR ERV1 -61 593 37 2 761 225 190 349 23 chrX 23165151 23165237 -143485059 - RLTR6_Mm LTR ERV1 -540 114 1 2 761 56124 15 23 8 chrX 23165237 23172892 -143477404 - RLTR6-int LTR ERV1 0 7778 1 2 761 2351 115 207 29 chrX 23172892 23173375 -143476921 - RLTR6_Mm LTR ERV1 -49 605 37 2 761 225 190 349 23 chrX 23173398 23173484 -143476812 - RLTR6_Mm LTR ERV1 -540 114 1 2 761 7526 42 4 0 chrX 23173484 23174561 -143475735 + L1Md_F3 LINE L1 5528 6584 0 2 761 2773 105 30 0 chrX 23174561 23175000 -143475296 - L1_Mm LINE L1 -206 5677 5226 2 761 628 184 19 115 chrX 23175001 23175206 -143475090 - L1VL1 LINE L1 -6053 365 2 2 761 841 224 70 20 chrX 23175236 23175436 -143474860 - B3 SINE B2 -5 211 2 2 761 219 69 0 0 chrX 23176501 23176530 -143473766 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 2 761 445 279 0 43 chrX 23176600 23176716 -143473580 + PB1D10 SINE Alu 6 116 -1 2 761 261 327 12 56 chrX 23176999 23177238 -143473058 + L1M5 LINE L1 5572 5811 -313 2 761 873 226 38 9 chrX 23177545 23177755 -143472541 - B3 SINE B2 0 216 1 2 761 366 23 0 0 chrX 23177774 23177817 -143472479 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 761 790 275 138 14 chrX 23177910 23178257 -143472039 + MLT1B LTR MaLR 1 390 0 2 761 1706 204 8 53 chrX 23178330 23178729 -143471567 - Lx6 LINE L1 -381 7079 6699 2 761 9103 152 50 25 chrX 23178731 23180680 -143469616 - L1_Mur3 LINE L1 -1250 4630 2632 2 761 2016 196 44 68 chrX 23180680 23181250 -143469046 - RLTR31_Mm LTR ERVK 0 561 6 2 761 340 205 39 0 chrX 23181250 23181328 -143468968 - L1_Mur3 LINE L1 -3254 2626 2546 2 761 1153 177 43 62 chrX 23181328 23181788 -143468508 - RMER17C LTR ERVK 0 410 13 2 761 620 130 8 25 chrX 23181798 23181916 -143468380 - L1_Mur3 LINE L1 -3330 2550 2435 2 761 5150 198 43 4 chrX 23181902 23182055 -143468241 - L1_Mur3 LINE L1 -6453 1275 1100 2 761 468 0 0 0 chrX 23182055 23182107 -143468189 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 761 5150 198 43 4 chrX 23182107 23183058 -143467238 - L1_Mur3 LINE L1 -6629 1099 128 2 761 351 0 0 0 chrX 23183184 23183223 -143467073 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 761 375 316 28 83 chrX 23183226 23183371 -143466925 - RSINE1 SINE B4 -25 140 4 2 761 271 172 0 0 chrX 23183372 23183430 -143466866 + L1MB8 LINE L1 6112 6169 -9 2 761 865 160 77 33 chrX 23183565 23183746 -143466550 + B2_Mm2 SINE B2 2 190 -5 2 761 241 185 0 0 chrX 23183960 23184014 -143466282 + L1M5 LINE L1 3709 3762 -2384 2 761 32959 76 4 5 chrX 23184016 23189982 -143460314 - L1Md_F2 LINE L1 0 6582 217 2 761 297 316 88 29 chrX 23190167 23190304 -143459992 + B1F2 SINE Alu 1 145 -4 2 761 280 271 10 77 chrX 23190312 23190416 -143459880 + PB1D9 SINE Alu 2 98 -22 2 761 214 306 0 0 chrX 23190433 23190482 -143459814 + ID SINE ID 25 73 -151 2 761 338 107 0 18 chrX 23190483 23190540 -143459756 + (GAAAA)n Simple_repeat Simple_repeat 4 59 0 2 761 2377 58 0 0 chrX 23190542 23190836 -143459460 - MT2C_Mm LTR ERVL -1 474 181 2 761 789 179 6 22 chrX 23190837 23191020 -143459276 + GA-rich Low_complexity Low_complexity 1 180 0 2 761 522 288 0 0 chrX 23191036 23191213 -143459083 + GA-rich Low_complexity Low_complexity 1 177 0 2 761 199 241 5 94 chrX 23191250 23191442 -143458854 + G-rich Low_complexity Low_complexity 1 175 0 2 761 373 348 28 21 chrX 23191442 23191583 -143458713 + polypurine Low_complexity Low_complexity 4 145 0 2 761 909 83 0 0 chrX 23191583 23191715 -143458581 + (GAGAA)n Simple_repeat Simple_repeat 2 133 0 2 761 272 324 105 0 chrX 23192758 23192863 -143457433 + PB1 SINE Alu 1 116 -11 2 761 315 304 41 82 chrX 23192915 23193037 -143457259 - PB1D10 SINE Alu 0 117 1 2 761 320 250 59 12 chrX 23193150 23193235 -143457061 - MIR SINE MIR -170 92 4 2 761 666 221 0 45 chrX 23193337 23193493 -143456803 + B1F2 SINE Alu 1 149 0 2 761 407 321 130 37 chrX 23193745 23194153 -143456143 - L3 LINE CR1 -739 3750 3305 2 761 21 0 0 0 chrX 23194698 23194719 -143455577 + AT_rich Low_complexity Low_complexity 1 21 0 2 761 343 311 126 5 chrX 23195242 23195449 -143454847 - MIR SINE MIR 0 262 31 2 761 230 258 194 51 chrX 23195807 23195905 -143454391 - PB1D10 SINE Alu -3 114 3 2 761 21 0 0 0 chrX 23195940 23195961 -143454335 + AT_rich Low_complexity Low_complexity 1 21 0 2 761 1023 208 5 10 chrX 23196303 23196494 -143453802 - MTC LTR MaLR 0 421 232 2 761 5801 72 8 38 chrX 23196494 23197321 -143452975 - RLTR13B4 LTR ERVK 0 803 1 2 761 1030 173 116 22 chrX 23197321 23197533 -143452763 - MTC LTR MaLR -188 233 1 2 761 1888 103 34 17 chrX 23197696 23197992 -143452304 - L1Md_F2 LINE L1 0 6582 6282 3 761 271 235 0 0 chrX 23198830 23198881 -143451415 + ID4 SINE ID 33 83 0 3 761 303 250 36 71 chrX 23199581 23199693 -143450603 + PB1D10 SINE Alu 1 108 -9 3 95 366 42 0 0 chrX 23199743 23199791 -143450505 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 762 671 116 9 0 chrX 23199843 23199955 -143450341 - Lx LINE L1 -715 5939 5827 3 762 6691 130 14 4 chrX 23200573 23202362 -143447934 - Lx LINE L1 -7 6647 4844 3 762 4685 105 19 0 chrX 23202362 23203030 -143447266 + Lx LINE L1 5967 6647 -7 3 762 649 239 21 11 chrX 23203051 23203237 -143447059 + MurSatRep1 Unknown Unknown 1604 1791 -346 3 762 5838 86 27 21 chrX 23203273 23204063 -143446233 - L1VL4 LINE L1 -1750 1809 1013 3 762 1451 63 21 0 chrX 23204063 23204253 -143446043 - B2_Mm2 SINE B2 0 195 2 3 762 5838 133 29 18 chrX 23204253 23205268 -143445028 - L1VL4 LINE L1 -2547 1012 1 3 762 910 216 27 59 chrX 23205618 23205839 -143444457 - B3 SINE B2 0 216 3 3 762 217 203 30 30 chrX 23205877 23205943 -143444353 + A-rich Low_complexity Low_complexity 2 67 0 3 762 1527 132 52 122 chrX 23206066 23206411 -143443885 + ORR1A4 LTR MaLR 1 321 -8 3 762 722 185 77 0 chrX 23206443 23206573 -143443723 - B1_Mur2 SINE Alu 0 149 10 3 762 21 36 0 0 chrX 23206628 23206656 -143443640 + AT_rich Low_complexity Low_complexity 1 28 0 3 762 690 280 10 67 chrX 23207140 23207335 -143442961 + ORR1D2 LTR MaLR 1 184 -186 3 762 396 55 0 0 chrX 23207346 23207401 -143442895 + (GTTTG)n Simple_repeat Simple_repeat 4 58 0 3 762 898 138 0 21 chrX 23207408 23207549 -143442747 - B1_Mur4 SINE Alu -7 143 6 3 762 662 219 99 17 chrX 23207542 23207714 -143442582 + ORR1D2 LTR MaLR 183 368 -2 3 762 296 234 80 9 chrX 23208234 23208346 -143441950 + L1MEe LINE L1 309 428 -4426 3 762 1336 108 113 5 chrX 23209117 23209330 -143440966 - L1Md_F2 LINE L1 -13 6569 6334 3 762 22 70 0 0 chrX 23209434 23209477 -143440819 + AT_rich Low_complexity Low_complexity 1 43 0 3 762 303 328 64 68 chrX 23209558 23209777 -143440519 + L1ME4a LINE L1 5841 6058 -66 3 762 7465 57 2 1 chrX 23209779 23211232 -143439064 - L1Md_F2 LINE L1 0 6582 5129 3 762 4189 75 7 15 chrX 23211233 23211842 -143438454 + L1Md_F2 LINE L1 4522 5125 -758 3 762 1281 253 102 33 chrX 23211898 23212290 -143438006 + MTD LTR MaLR 1 419 0 3 762 514 340 50 4 chrX 23212396 23212676 -143437620 + L1MDa LINE L1 225 517 -6116 3 762 2948 136 124 2 chrX 23212779 23213301 -143436995 + Lx4A LINE L1 6271 6856 -202 3 762 6812 133 20 7 chrX 23213297 23214489 -143435807 - L1_Mur2 LINE L1 -1103 4774 3567 3 762 413 144 71 20 chrX 23214490 23214589 -143435707 + ORR1D-int LTR MaLR 348 451 -919 3 762 3451 78 0 0 chrX 23214606 23215096 -143435200 + MusHAL1 LINE L1 1291 1780 -932 3 762 414 283 20 0 chrX 23215097 23215196 -143435100 - ORR1D1 LTR MaLR -202 172 72 3 762 230 245 0 0 chrX 23215196 23215249 -143435047 + L1M2 LINE L1 5495 5547 -744 3 762 267 258 0 0 chrX 23215269 23215331 -143434965 + L1M2 LINE L1 5661 5722 -569 3 762 514 186 113 0 chrX 23215396 23215493 -143434803 + PB1D9 SINE Alu 1 108 -12 3 762 318 158 12 35 chrX 23215513 23215598 -143434698 + A-rich Low_complexity Low_complexity 2 84 0 3 762 660 250 16 0 chrX 23215604 23215732 -143434564 + B3 SINE B2 1 130 -86 3 762 441 205 71 0 chrX 23215765 23215877 -143434419 - L1_Mur3 LINE L1 -2027 3853 3734 3 762 1962 224 41 69 chrX 23215874 23216440 -143433856 + Lx5 LINE L1 6498 7047 -3 3 762 23 33 0 0 chrX 23216556 23216586 -143433710 + AT_rich Low_complexity Low_complexity 1 30 0 3 762 725 119 8 56 chrX 23216598 23216723 -143433573 - ORR1B1 LTR MaLR -14 380 262 3 762 763 221 7 0 chrX 23216723 23216872 -143433424 + B1_Mur4 SINE Alu 1 150 0 3 762 477 0 0 0 chrX 23216932 23216985 -143433311 + (GA)n Simple_repeat Simple_repeat 2 54 0 3 762 1302 93 29 0 chrX 23217031 23217235 -143433061 - Lx LINE L1 -6 6648 6439 3 762 1514 106 41 0 chrX 23217236 23217481 -143432815 - L1_Mur1 LINE L1 -683 5203 4949 3 762 517 149 0 0 chrX 23217482 23217576 -143432720 + Lx2 LINE L1 6903 6996 -1 3 762 633 317 40 18 chrX 23217624 23217852 -143432444 + RMER15 LTR ERVL 237 469 -106 3 762 218 213 0 0 chrX 23217852 23217899 -143432397 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 762 788 269 136 11 chrX 23217899 23218083 -143432213 + B4 SINE B4 86 292 0 3 762 1605 185 17 92 chrX 23218106 23218463 -143431833 + MTC LTR MaLR 1 330 -91 3 762 2158 168 42 12 chrX 23218465 23218870 -143431426 + MTC LTR MaLR 5 421 0 3 762 752 277 106 21 chrX 23218949 23219325 -143430971 + L1MD1 LINE L1 5419 5826 -416 3 762 12065 72 1 78 chrX 23219722 23220903 -143429393 + L1_Mm LINE L1 3537 4603 -1280 3 762 4569 55 5 16 chrX 23220903 23221510 -143428786 + L1Md_F2 LINE L1 5983 6582 0 3 762 12065 72 1 78 chrX 23221510 23222294 -143428002 + L1_Mm LINE L1 4604 5350 -533 3 762 1067 260 65 15 chrX 23222329 23222653 -143427643 + L1MB2 LINE L1 5622 5961 -210 3 762 4131 128 82 0 chrX 23222753 23223402 -143426894 + Lx2 LINE L1 6294 6995 -2 3 762 21 0 0 0 chrX 23223498 23223519 -143426777 + AT_rich Low_complexity Low_complexity 1 21 0 3 762 300 278 9 118 chrX 23224025 23224135 -143426161 + PB1D10 SINE Alu 12 109 -8 3 762 415 239 62 27 chrX 23224147 23224259 -143426037 + B1F SINE Alu 33 148 -1 3 762 220 300 24 36 chrX 23224283 23224366 -143425930 + ID4 SINE ID 2 83 0 3 762 396 374 38 6 chrX 23224818 23225001 -143425295 + MER45B DNA Tip100 5 193 -847 3 762 448 272 33 0 chrX 23225011 23225103 -143425193 + ID_B1 SINE B4 15 109 -115 3 762 1208 211 0 0 chrX 23225116 23225324 -143424972 + B3 SINE B2 1 208 -8 3 762 2326 152 24 24 chrX 23225535 23225945 -143424351 - RMER15 LTR ERVL 0 575 166 3 762 7444 165 30 20 chrX 23225945 23227386 -143422910 - L1_Mur2 LINE L1 -551 5326 3872 3 762 3273 170 85 77 chrX 23227386 23228150 -143422146 + RMER19B LTR ERVK 1 770 -132 3 762 2116 96 0 3 chrX 23228162 23228466 -143421830 - L1_Mus4 LINE L1 0 6636 6334 3 762 2711 138 16 5 chrX 23228467 23228897 -143421399 + L1_Mm LINE L1 5446 5880 -3 3 762 695 159 75 16 chrX 23228926 23229067 -143421229 + RMER19B LTR ERVK 756 883 -19 3 762 3682 103 3 18 chrX 23229076 23229859 -143420437 + L1Md_F2 LINE L1 658 1403 -4480 3 762 2328 72 119 11 chrX 23229859 23230211 -143420085 + RLTR10 LTR ERVK 1 390 0 3 762 5797 28 0 35 chrX 23230211 23230923 -143419373 + RLTR10-int LTR ERVK 302 988 -999 3 762 8733 20 0 1 chrX 23231002 23231998 -143418298 + RLTR10-int LTR ERVK 990 1984 -3 3 762 2234 83 119 11 chrX 23232000 23232352 -143417944 + RLTR10 LTR ERVK 1 390 0 3 762 30510 72 2 12 chrX 23232352 23236584 -143413712 + L1Md_F2 LINE L1 1398 5585 -298 3 762 7253 75 23 0 chrX 23236585 23237559 -143412737 + L1Md_F2 LINE L1 5587 6582 0 3 762 7328 212 26 157 chrX 23237589 23239785 -143410511 - L1_Mur3 LINE L1 -2001 3876 2067 3 762 186 43 0 0 chrX 23239785 23239808 -143410488 + (GGA)n Simple_repeat Simple_repeat 1 23 0 3 762 7328 212 26 157 chrX 23239808 23239831 -143410465 - L1_Mur3 LINE L1 -3811 2066 2050 3 762 369 0 0 0 chrX 23239831 23239872 -143410424 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 762 360 0 0 0 chrX 23239872 23239911 -143410385 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 762 7328 211 19 133 chrX 23239911 23241159 -143409137 - L1_Mur3 LINE L1 -3828 2049 859 3 762 2283 231 68 45 chrX 23241402 23242001 -143408295 - RLTR17 LTR ERVK -73 619 7 3 762 696 123 0 0 chrX 23243647 23243761 -143406535 + (GGA)n Simple_repeat Simple_repeat 2 115 0 3 762 186 118 0 0 chrX 23243874 23243908 -143406388 + (A)n Simple_repeat Simple_repeat 1 34 0 3 762 322 256 189 0 chrX 23244718 23244808 -143405488 - B1F2 SINE Alu -42 107 1 3 762 325 221 52 0 chrX 23244826 23244903 -143405393 - L1MA8 LINE L1 -216 6075 5995 3 762 681 250 29 86 chrX 23245091 23245301 -143404995 + B3A SINE B2 1 198 0 3 762 638 250 0 21 chrX 23245402 23245545 -143404751 - B1_Mur2 SINE Alu -7 142 3 3 762 312 311 7 53 chrX 23245663 23245768 -143404528 + B1F SINE Alu 9 114 -6 3 762 555 81 10 20 chrX 23245768 23245869 -143404427 + (GA)n Simple_repeat Simple_repeat 1 100 0 3 762 251 209 0 87 chrX 23245965 23246030 -143404266 + A-rich Low_complexity Low_complexity 3 62 0 3 762 2071 49 8 0 chrX 23246030 23246346 -143403950 + L1Md_F3 LINE L1 6302 6584 0 3 762 304 319 44 0 chrX 23246458 23246549 -143403747 + PB1D10 SINE Alu 15 109 -8 3 762 1832 267 97 34 chrX 23246721 23247453 -143402843 - Lx8 LINE L1 -1092 6381 5604 3 762 949 107 81 0 chrX 23247454 23247603 -143402693 + ORR1C1 LTR MaLR 1 161 -217 3 762 306 0 0 0 chrX 23247608 23247642 -143402654 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 762 252 0 0 0 chrX 23247642 23247669 -143402627 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 762 334 85 34 0 chrX 23247669 23247727 -143402569 + (TCTA)n Simple_repeat Simple_repeat 1 61 0 3 762 360 0 0 0 chrX 23247792 23247832 -143402464 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 762 654 162 0 0 chrX 23248245 23248344 -143401952 + B1_Mur4 SINE Alu 52 150 0 3 762 218 217 0 0 chrX 23248565 23248611 -143401685 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 762 4347 157 58 64 chrX 23248898 23249805 -143400491 - RMER19B LTR ERVK 0 902 1 3 762 342 0 0 0 chrX 23249942 23249980 -143400316 + (TC)n Simple_repeat Simple_repeat 1 38 0 3 762 323 60 20 0 chrX 23249980 23250029 -143400267 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 762 441 229 43 62 chrX 23250093 23250313 -143399983 - L1MA5 LINE L1 -384 5907 5679 3 762 444 360 105 15 chrX 23250330 23250655 -143399641 + L2b LINE L2 2783 3136 -239 3 762 353 321 34 41 chrX 23251192 23251338 -143398958 - MER5B DNA MER1_type -1 177 33 3 762 841 253 50 15 chrX 23251610 23251811 -143398485 + B3 SINE B2 1 208 -8 3 762 753 184 8 0 chrX 23252374 23252499 -143397797 + ID_B1 SINE B4 99 224 0 3 762 339 261 39 10 chrX 23252587 23252698 -143397598 + B1F2 SINE Alu 25 144 -5 4 762 208 297 125 9 chrX 23252770 23252882 -143397414 + L2c LINE L2 3018 3142 -245 4 762 691 184 27 60 chrX 23252940 23253090 -143397206 + B1_Mus2 SINE Alu 2 146 -1 4 762 223 338 0 13 chrX 23253215 23253293 -143397003 + L2c LINE L2 3268 3344 -43 4 762 25 0 0 0 chrX 23254280 23254305 -143395991 + AT_rich Low_complexity Low_complexity 1 25 0 4 762 221 361 60 0 chrX 23255504 23255587 -143394709 + PB1 SINE Alu 21 108 -19 4 762 207 0 0 0 chrX 23255602 23255625 -143394671 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 762 507 323 0 19 chrX 23255995 23256013 -143394283 + ID_B1 SINE B4 70 224 0 4 762 549 286 21 0 chrX 23256013 23256153 -143394143 + B1F SINE Alu 7 149 0 4 762 200 188 0 0 chrX 23256168 23256200 -143394096 + polypurine Low_complexity Low_complexity 1 32 0 4 762 28 0 0 0 chrX 23256489 23256517 -143393779 + AT_rich Low_complexity Low_complexity 1 28 0 4 762 319 313 61 0 chrX 23256626 23256725 -143393571 + MTEa LTR MaLR 1 105 -274 4 762 284 240 242 39 chrX 23256725 23256808 -143393488 + MT2A LTR ERVL 1 219 -314 4 762 246 62 0 0 chrX 23256809 23256841 -143393455 + (GGGA)n Simple_repeat Simple_repeat 3 34 0 4 762 26 50 0 0 chrX 23257045 23257085 -143393211 + AT_rich Low_complexity Low_complexity 1 40 0 4 762 273 29 0 0 chrX 23257501 23257535 -143392761 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 762 288 0 0 0 chrX 23257543 23257575 -143392721 + (TC)n Simple_repeat Simple_repeat 1 32 0 4 762 419 0 20 0 chrX 23257575 23257626 -143392670 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 762 1383 244 82 0 chrX 23257628 23257944 -143392352 - MTE2b LTR MaLR -37 342 1 4 762 377 244 39 0 chrX 23258518 23258596 -143391700 + ID_B1 SINE B4 101 181 -43 4 762 309 300 32 43 chrX 23258596 23258612 -143391684 + PB1D10 SINE Alu 20 112 -5 4 762 394 271 153 28 chrX 23258719 23258848 -143391448 + RSINE1 SINE B4 3 150 -15 4 762 201 39 0 0 chrX 23258848 23258874 -143391422 + (TCTCTG)n Simple_repeat Simple_repeat 3 28 0 4 762 394 271 153 28 chrX 23258874 23258888 -143391408 + RSINE1 SINE B4 151 164 -1 4 762 297 0 0 0 chrX 23258908 23258941 -143391355 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 4 762 783 143 136 7 chrX 23258964 23259119 -143391177 + B2_Mm2 SINE B2 2 176 -19 4 762 745 256 16 65 chrX 23259377 23259623 -143390673 + L1MA9 LINE L1 5875 6108 -204 4 762 328 245 28 0 chrX 23259748 23259854 -143390442 + L1MA9 LINE L1 6153 6261 -30 4 762 7401 45 4 3 chrX 23259958 23260880 -143389416 + L1Md_F2 LINE L1 5658 6580 -2 4 762 1328 324 68 48 chrX 23261343 23261413 -143388883 - MLT1E3 LTR MaLR 0 624 552 4 762 3084 147 54 25 chrX 23261413 23261964 -143388332 + Lx4A LINE L1 6492 7058 0 4 762 1328 324 68 48 chrX 23261964 23262500 -143387796 - MLT1E3 LTR MaLR -73 551 6 4 762 230 200 15 77 chrX 23262631 23262696 -143387600 + RLTR28 LTR ERVL 430 490 -34 4 762 526 377 38 8 chrX 23262925 23263163 -143387133 + MIR SINE MIR 18 262 0 4 762 247 269 158 42 chrX 23263407 23263527 -143386769 + MLT1A1 LTR MaLR 1 134 -274 4 762 341 237 50 20 chrX 23263663 23263762 -143386534 + MLT1A1 LTR MaLR 307 408 0 4 762 2181 135 12 3 chrX 23263805 23264140 -143386156 + ORR1A1 LTR MaLR 1 338 -8 4 762 221 83 0 27 chrX 23264232 23264269 -143386027 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 4 762 236 302 0 0 chrX 23264378 23264441 -143385855 - MLT1A0 LTR MaLR -284 81 19 4 762 775 194 0 0 chrX 23264645 23264774 -143385522 + B1_Mur2 SINE Alu 2 130 -19 4 762 370 235 99 0 chrX 23264779 23264860 -143385436 - B3A SINE B2 -109 89 1 4 762 468 289 16 40 chrX 23264902 23265028 -143385268 - B1F SINE Alu -8 141 19 4 762 252 0 0 0 chrX 23265578 23265606 -143384690 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 762 699 215 22 20 chrX 23265632 23265821 -143384475 - B3 SINE B2 -8 187 1 4 762 22 35 0 0 chrX 23266614 23266643 -143383653 + AT_rich Low_complexity Low_complexity 1 29 0 4 762 809 327 55 13 chrX 23266682 23266989 -143383307 - Tigger9b DNA MER2_type -266 358 39 4 762 696 145 0 0 chrX 23268044 23268161 -143382135 + (TA)n Simple_repeat Simple_repeat 1 117 0 4 762 634 254 29 0 chrX 23269089 23269227 -143381069 - ID_B1 SINE B4 0 224 83 4 762 290 169 39 13 chrX 23269236 23269314 -143380982 - L1MA7 LINE L1 -2 6289 6210 4 762 450 0 0 0 chrX 23271057 23271107 -143379189 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 762 216 157 19 19 chrX 23273099 23273151 -143377145 + (TTTA)n Simple_repeat Simple_repeat 3 54 0 4 762 325 312 35 9 chrX 23273304 23273417 -143376879 - MIRc SINE MIR -147 121 6 4 762 387 56 0 0 chrX 23273963 23274017 -143376279 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 762 240 338 26 13 chrX 23274024 23274102 -143376194 - ID4_ SINE ID -2 81 3 4 762 364 218 92 24 chrX 23274108 23274250 -143376046 - B1F SINE Alu 0 149 1 4 762 24 67 0 0 chrX 23274420 23274465 -143375831 + AT_rich Low_complexity Low_complexity 1 45 0 4 762 227 327 174 32 chrX 23274509 23274664 -143375632 - MIR3 SINE MIR -5 203 27 4 762 345 248 129 0 chrX 23275234 23275335 -143374961 - PB1D10 SINE Alu -3 114 1 4 762 561 262 24 8 chrX 23275408 23275535 -143374761 + ID_B1 SINE B4 82 210 -14 4 762 347 326 30 10 chrX 23275885 23275984 -143374312 + ID_B1 SINE B4 79 179 -45 4 762 434 327 10 23 chrX 23275897 23276034 -143374262 + PB1D10 SINE Alu 13 146 -3 4 762 8647 125 47 9 chrX 23276196 23277552 -143372744 - Lx4A LINE L1 -2 7056 5650 4 762 534 241 46 0 chrX 23277553 23277661 -143372635 - B1F2 SINE Alu -11 138 26 4 762 500 289 133 133 chrX 23277734 23277933 -143372363 - B4A SINE B4 -12 280 86 4 762 790 265 50 0 chrX 23277933 23278133 -143372163 - B3 SINE B2 -6 210 1 4 762 500 289 133 133 chrX 23278133 23278212 -143372084 - B4A SINE B4 -207 85 2 4 762 1100 91 0 0 chrX 23278824 23278967 -143371329 - B1_Mus2 SINE Alu -2 145 3 4 762 2362 256 65 20 chrX 23280220 23281658 -143368638 - L1MA6 LINE L1 -121 6179 4669 4 762 312 304 0 48 chrX 23281722 23281805 -143368491 - PB1D7 SINE Alu -41 79 1 4 762 444 249 141 6 chrX 23281805 23281995 -143368301 - L1MA6 LINE L1 -1490 4650 4444 4 762 228 185 70 53 chrX 23282050 23282107 -143368189 - ID_B1 SINE B4 -53 171 114 4 762 493 203 86 0 chrX 23282110 23282238 -143368058 - L1MA6 LINE L1 -1696 4447 4309 4 762 372 238 88 0 chrX 23282247 23282327 -143367969 - ID_B1 SINE B4 -4 220 134 4 762 247 251 104 74 chrX 23282327 23282357 -143367939 - B1F SINE Alu -1 121 3 4 762 819 176 14 0 chrX 23282381 23282529 -143367767 + B1_Mur4 SINE Alu 1 150 0 4 762 279 140 0 0 chrX 23282536 23282586 -143367710 + (ATG)n Simple_repeat Simple_repeat 2 51 0 4 762 333 0 0 0 chrX 23282606 23282643 -143367653 + (TAA)n Simple_repeat Simple_repeat 2 38 0 4 762 352 159 48 0 chrX 23282643 23282706 -143367590 + B1_Mus2 SINE Alu 78 143 -4 4 762 318 106 0 0 chrX 23282708 23282755 -143367541 + (TAA)n Simple_repeat Simple_repeat 1 47 0 4 762 306 50 0 0 chrX 23283223 23283263 -143367033 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 762 324 0 0 0 chrX 23283266 23283302 -143366994 + (TC)n Simple_repeat Simple_repeat 1 36 0 4 762 182 37 0 36 chrX 23283302 23283329 -143366967 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 762 359 157 0 11 chrX 23283371 23283461 -143366835 + CT-rich Low_complexity Low_complexity 2 90 0 4 762 360 0 0 0 chrX 23283461 23283501 -143366795 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 762 659 294 7 0 chrX 23283951 23284087 -143366209 + RSINE1 SINE B4 29 165 0 4 762 228 100 0 0 chrX 23284532 23284572 -143365724 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 4 762 26 40 0 20 chrX 23284773 23284796 -143365500 + AT_rich Low_complexity Low_complexity 1 23 0 4 762 1059 75 20 0 chrX 23284796 23284943 -143365353 - B1_Mur4 SINE Alu 0 150 1 4 762 26 40 0 20 chrX 23284943 23284970 -143365326 + AT_rich Low_complexity Low_complexity 1 27 0 4 762 239 273 39 49 chrX 23285094 23285127 -143365169 + B4A SINE B4 50 86 -206 4 762 323 224 30 0 chrX 23285127 23285194 -143365102 + B1_Mus1 SINE Alu 1 69 -79 4 762 728 270 22 13 chrX 23285354 23285559 -143364737 + B4A SINE B4 1 187 -37 4 762 268 254 48 0 chrX 23285557 23285620 -143364676 + B4A SINE B4 80 145 -147 4 762 255 273 18 0 chrX 23285626 23285681 -143364615 + B4A SINE B4 90 145 -147 4 762 228 286 48 0 chrX 23285679 23285742 -143364554 + B4A SINE B4 80 145 -147 4 762 686 287 52 16 chrX 23285801 23285992 -143364304 + B4A SINE B4 80 277 -15 4 762 812 199 0 0 chrX 23286345 23286486 -143363810 + B1_Mus1 SINE Alu 1 141 -7 4 762 309 297 53 46 chrX 23286354 23286506 -143363790 + B4A SINE B4 94 246 -46 4 762 774 199 97 0 chrX 23286623 23286839 -143363457 - Lx9 LINE L1 0 7644 7408 4 762 204 97 0 0 chrX 23287606 23287637 -143362659 + (TGG)n Simple_repeat Simple_repeat 1 31 0 4 762 613 272 40 40 chrX 23288200 23288376 -143361920 - RMER30 DNA MER1_type -7 195 20 4 762 1272 88 17 0 chrX 23289152 23289333 -143360963 + B2_Mm1a SINE B2 1 184 -9 4 762 682 204 73 0 chrX 23289968 23290105 -143360191 - B1_Mus2 SINE Alu 0 147 1 4 762 207 0 0 0 chrX 23290119 23290142 -143360154 + (CTTTG)n Simple_repeat Simple_repeat 2 24 0 4 762 916 135 0 0 chrX 23290149 23290282 -143360014 - B1_Mur4 SINE Alu -15 135 3 4 762 8786 81 16 23 chrX 23290294 23292400 -143357896 - L1_Mus1 LINE L1 -1 6566 4489 4 762 4569 54 3 0 chrX 23292395 23292985 -143357311 + L1_Mus1 LINE L1 3889 4480 -1403 4 762 22 0 0 0 chrX 23294300 23294322 -143355974 + AT_rich Low_complexity Low_complexity 1 22 0 4 762 319 312 32 84 chrX 23294446 23294600 -143355696 + L2c LINE L2 3241 3386 -1 4 762 431 343 186 31 chrX 23294866 23295420 -143354876 - L3 LINE CR1 -308 4181 3542 5 762 1308 228 128 12 chrX 23295431 23295751 -143354545 + ORR1D2 LTR MaLR 1 357 -13 5 762 291 29 0 0 chrX 23295862 23295897 -143354399 - U2 snRNA snRNA -153 35 1 5 762 309 254 60 0 chrX 23298385 23298452 -143351844 - ID4_ SINE ID -10 73 3 5 762 213 250 47 0 chrX 23298460 23298524 -143351772 + L2a LINE L2 3304 3370 -56 5 762 406 276 29 98 chrX 23298783 23298956 -143351340 - RSINE1 SINE B4 -4 161 1 5 762 4596 287 72 8 chrX 23299113 23300938 -143349358 - Lx8 LINE L1 -37 7436 5478 5 762 24 0 0 0 chrX 23301078 23301102 -143349194 + AT_rich Low_complexity Low_complexity 1 24 0 5 762 346 336 8 42 chrX 23301538 23301656 -143348640 + PB1 SINE Alu 14 127 0 5 762 665 302 8 8 chrX 23301889 23302149 -143348147 + L1MA6 LINE L1 5063 5322 -818 5 762 1019 207 54 29 chrX 23302153 23302357 -143347939 + B3 SINE B2 6 214 -2 5 762 577 219 9 9 chrX 23302379 23302494 -143347802 + ID_B1 SINE B4 99 213 -11 5 762 416 228 244 0 chrX 23302506 23302703 -143347593 + L1MA6 LINE L1 5319 5563 -734 5 762 613 254 18 40 chrX 23302709 23302869 -143347427 - ID_B1 SINE B4 -74 218 48 5 762 1111 294 30 12 chrX 23302869 23303269 -143347027 + L1MA6 LINE L1 5598 6004 -296 5 762 757 272 77 25 chrX 23303363 23303559 -143346737 + ID_B1 SINE B4 14 219 -5 5 762 440 87 29 0 chrX 23303689 23303758 -143346538 + (TCCC)n Simple_repeat Simple_repeat 4 74 0 5 762 450 0 0 0 chrX 23304282 23304332 -143345964 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 762 346 333 145 42 chrX 23304585 23304917 -143345379 + Tigger15a DNA TcMar 13 378 -337 5 762 28 29 0 0 chrX 23304980 23305015 -143345281 + AT_rich Low_complexity Low_complexity 1 35 0 5 762 1051 95 0 0 chrX 23305516 23305653 -143344643 - B1_Mus1 SINE Alu -10 138 2 5 762 11718 41 3 1 chrX 23305667 23307807 -143342489 - L1Md_F2 LINE L1 -3 6579 4435 5 762 1502 82 0 0 chrX 23307808 23308015 -143342281 + L1_Mm LINE L1 4016 4222 -1661 5 762 398 219 97 55 chrX 23308011 23308156 -143342140 + Lx4B LINE L1 6854 7004 -54 5 762 332 145 0 46 chrX 23308183 23308248 -143342048 - Lx6 LINE L1 -689 6771 6710 5 762 1943 58 19 4 chrX 23308489 23308749 -143341547 - L1_Mus2 LINE L1 0 6566 6303 5 762 1428 70 15 0 chrX 23308776 23308977 -143341319 - L1_Mus2 LINE L1 0 6566 6363 5 762 26 74 0 0 chrX 23309643 23309697 -143340599 + AT_rich Low_complexity Low_complexity 1 54 0 5 762 384 219 0 52 chrX 23309934 23310011 -143340285 - ID4 SINE ID -2 81 9 5 762 241 242 20 20 chrX 23310059 23310160 -143340136 + (TA)n Simple_repeat Simple_repeat 1 101 0 5 762 301 323 74 6 chrX 23310169 23310331 -143339965 + L1ME3B LINE L1 5808 5980 -260 5 762 675 286 0 24 chrX 23310334 23310376 -143339920 + ID SINE ID 44 81 -143 5 762 431 297 80 0 chrX 23310376 23310514 -143339782 + B1F SINE Alu 1 149 0 5 762 426 203 49 0 chrX 23310809 23310916 -143339380 - L1MD1 LINE L1 -67 6175 6079 5 762 503 238 125 0 chrX 23311044 23311212 -143339084 - L1MD2 LINE L1 -390 5969 5781 5 762 482 204 149 65 chrX 23311262 23311430 -143338866 - B3A SINE B2 -9 186 5 5 762 5160 107 57 14 chrX 23311883 23312714 -143337582 - Lx LINE L1 -6 6648 5783 5 762 535 161 47 16 chrX 23312716 23312853 -143337443 - MYSERV6-int LTR ERVK -222 8737 8644 5 762 357 24 0 0 chrX 23312853 23312895 -143337401 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 5 762 1125 82 0 0 chrX 23312919 23313066 -143337230 + B1_Mus2 SINE Alu 1 147 0 5 762 206 118 0 0 chrX 23313066 23313100 -143337196 + (A)n Simple_repeat Simple_repeat 1 34 0 5 762 26056 118 13 7 chrX 23313120 23315158 -143335138 - L1_Mus4 LINE L1 -2 6634 4613 5 762 1084 69 0 39 chrX 23315158 23315339 -143334957 + (TTTTC)n Simple_repeat Simple_repeat 4 177 0 5 762 1131 82 0 0 chrX 23315341 23315488 -143334808 - B1_Mm SINE Alu 0 147 1 5 762 26056 149 15 11 chrX 23315488 23316625 -143333671 - L1_Mus4 LINE L1 -1271 4612 3478 5 762 189 0 0 0 chrX 23316625 23316646 -143333650 + (TTG)n Simple_repeat Simple_repeat 1 21 0 5 762 26056 145 15 15 chrX 23316646 23318982 -143331314 - L1_Mus4 LINE L1 -2406 3477 1108 5 762 4555 113 20 10 chrX 23319235 23319949 -143330347 - L1_Mus3 LINE L1 -1 6637 5917 5 762 1547 218 40 54 chrX 23319949 23320376 -143329920 - L1_Mus4 LINE L1 -5537 1120 700 5 762 423 73 16 13 chrX 23320398 23320483 -143329813 - L1_Mus4 LINE L1 -1192 5808 5724 5 762 231 36 0 0 chrX 23320506 23320534 -143329762 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 5 762 1548 61 9 5 chrX 23320779 23320992 -143329304 - L1Md_F3 LINE L1 0 6584 6371 5 762 259 198 143 0 chrX 23321016 23321107 -143329189 - Lx9 LINE L1 -8 7636 7533 5 762 404 301 19 31 chrX 23321112 23321264 -143329032 - B1F SINE Alu -1 146 1 5 762 7077 200 43 19 chrX 23321373 23322760 -143327536 - Lx6 LINE L1 0 7460 6040 5 762 681 266 16 31 chrX 23322785 23322979 -143327317 + Lx6 LINE L1 5842 6032 -1428 5 762 519 60 0 0 chrX 23323374 23323441 -143326855 + (TA)n Simple_repeat Simple_repeat 1 67 0 5 762 21 0 0 0 chrX 23323921 23323942 -143326354 + AT_rich Low_complexity Low_complexity 1 21 0 5 762 7056 97 33 10 chrX 23323943 23325015 -143325281 - Lx3A LINE L1 -5 6976 5881 5 762 464 311 98 0 chrX 23325021 23325204 -143325092 + B3 SINE B2 1 201 -15 5 762 21 57 0 0 chrX 23325219 23325254 -143325042 + AT_rich Low_complexity Low_complexity 1 35 0 5 762 1310 59 0 40 chrX 23325256 23325415 -143324881 - L1Md_F3 LINE L1 -234 5649 5492 5 762 7526 36 9 4 chrX 23325415 23326346 -143323950 + L1Md_F3 LINE L1 5650 6584 0 5 762 1310 59 0 40 chrX 23326346 23326363 -143323933 - L1_Mm LINE L1 -392 5491 5480 5 762 818 165 72 62 chrX 23326358 23326394 -143323902 + Lx9 LINE L1 7293 7326 -318 5 762 1183 55 0 0 chrX 23326394 23326539 -143323757 + B1_Mus2 SINE Alu 1 145 -2 5 762 818 165 72 62 chrX 23326539 23326696 -143323600 + Lx9 LINE L1 7327 7488 -156 5 762 389 240 45 41 chrX 23327351 23327472 -143322824 + PB1D9 SINE Alu 2 127 0 5 762 688 219 36 0 chrX 23327560 23327697 -143322599 + B1_Mur2 SINE Alu 6 147 -2 5 762 612 320 48 48 chrX 23327857 23328149 -143322147 + B4A SINE B4 1 292 0 5 762 380 209 51 25 chrX 23328166 23328284 -143322012 + Lx4B LINE L1 6934 7054 -4 5 762 22 35 0 0 chrX 23328284 23328313 -143321983 + AT_rich Low_complexity Low_complexity 1 29 0 5 762 1890 191 84 10 chrX 23328331 23328734 -143321562 - Lx2B LINE L1 -20 6980 6548 5 762 31 0 0 0 chrX 23328792 23328823 -143321473 + AT_rich Low_complexity Low_complexity 1 31 0 5 762 403 306 91 108 chrX 23329034 23329210 -143321086 - MER20 DNA MER1_type -45 174 2 5 762 305 47 0 23 chrX 23329403 23329447 -143320849 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 5 762 215 160 60 0 chrX 23329545 23329595 -143320701 + T-rich Low_complexity Low_complexity 3 55 0 5 762 695 148 213 0 chrX 23329597 23329719 -143320577 - B1_Mur4 SINE Alu 0 150 3 5 762 510 281 35 21 chrX 23330238 23330380 -143319916 + ID_B1 SINE B4 79 222 -2 5 763 266 250 63 32 chrX 23331277 23331372 -143318924 + MIRc SINE MIR 57 154 -114 5 763 909 309 69 25 chrX 23331735 23332143 -143318153 - Lx8 LINE L1 -58 7415 6990 5 763 1203 54 0 0 chrX 23332144 23332292 -143318004 - B1_Mus1 SINE Alu 0 148 1 5 763 685 135 359 0 chrX 23332694 23332850 -143317446 + B3 SINE B2 4 215 -1 5 763 490 322 66 14 chrX 23333278 23333489 -143316807 + MIR SINE MIR 7 228 -34 5 763 509 295 70 0 chrX 23334292 23334421 -143315875 - B1F2 SINE Alu -11 138 1 5 763 23 33 0 0 chrX 23334619 23334649 -143315647 + AT_rich Low_complexity Low_complexity 1 30 0 5 763 216 279 16 0 chrX 23334732 23334793 -143315503 + CT-rich Low_complexity Low_complexity 4 65 0 5 763 609 210 6 22 chrX 23334816 23334996 -143315300 + CT-rich Low_complexity Low_complexity 2 178 0 5 763 221 197 15 0 chrX 23335150 23335216 -143315080 + (TTA)n Simple_repeat Simple_repeat 2 68 0 5 763 260 379 34 7 chrX 23335481 23335627 -143314669 + MIRb SINE MIR 68 217 -51 5 763 22 0 0 0 chrX 23335889 23335911 -143314385 + AT_rich Low_complexity Low_complexity 1 22 0 5 763 410 208 73 24 chrX 23336433 23336556 -143313740 + L1MB3 LINE L1 6041 6169 -14 5 763 320 267 176 0 chrX 23336560 23336725 -143313571 - L1MA5 LINE L1 -6 6294 6101 5 763 341 281 32 5 chrX 23336856 23336969 -143313327 + B1F SINE Alu 1 114 -35 5 763 290 26 26 0 chrX 23336982 23337021 -143313275 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 5 763 660 34 34 0 chrX 23337021 23337110 -143313186 - B1_Mus2 SINE Alu -13 134 43 5 763 883 239 56 0 chrX 23337249 23337446 -143312850 + B3 SINE B2 4 211 -5 5 763 324 281 48 10 chrX 23337512 23337616 -143312680 + PB1D10 SINE Alu 1 108 -9 5 763 1167 244 105 57 chrX 23337652 23338231 -143312065 + L1MB8 LINE L1 5566 6172 -6 5 763 556 286 98 17 chrX 23338309 23338483 -143311813 + B3A SINE B2 4 191 -7 5 763 23 0 0 0 chrX 23339060 23339083 -143311213 + AT_rich Low_complexity Low_complexity 1 23 0 5 763 7101 149 73 25 chrX 23340389 23341045 -143309251 - Lx2 LINE L1 0 6997 6287 5 763 2773 116 19 0 chrX 23341045 23341459 -143308837 - BGLII_Mus LTR ERVK 0 422 1 5 763 7823 155 33 14 chrX 23341459 23343230 -143307066 - Lx2 LINE L1 -711 6286 4499 5 763 3386 158 7 3 chrX 23343231 23343816 -143306480 + Lx2 LINE L1 3893 4479 -1398 5 763 226 128 0 25 chrX 23343877 23343917 -143306379 - RMER15 LTR ERVL -105 470 432 5 763 314 309 72 0 chrX 23343920 23344017 -143306279 - Lx8 LINE L1 -207 7266 7163 5 763 306 0 0 0 chrX 23344214 23344248 -143306048 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 5 763 239 338 42 95 chrX 23344419 23344558 -143305738 - PB1D9 SINE Alu 0 149 5 5 763 271 286 0 14 chrX 23344788 23344859 -143305437 + Charlie17a DNA MER1_type 6 75 -144 5 763 1091 229 60 131 chrX 23345098 23345495 -143304801 - MTE2a LTR MaLR -2 377 9 5 763 414 215 25 0 chrX 23345567 23345646 -143304650 + ID4 SINE ID 1 81 -2 6 763 266 309 0 12 chrX 23345783 23345865 -143304431 - ID4 SINE ID 0 83 3 6 763 328 341 163 28 chrX 23345979 23346341 -143303955 - L2c LINE L2 -15 3411 3001 6 763 973 245 10 14 chrX 23347404 23347611 -143302685 + B3 SINE B2 1 206 -10 6 763 2148 117 6 15 chrX 23347693 23348023 -143302273 + ORR1A4 LTR MaLR 1 327 -2 6 763 3337 178 27 47 chrX 23348023 23348934 -143301362 + ORR1A4-int LTR MaLR 3 846 -946 6 763 7034 133 32 26 chrX 23348934 23350947 -143299349 + Lx LINE L1 4636 6654 0 6 763 5217 145 10 105 chrX 23350947 23351548 -143298748 + ORR1A4-int LTR MaLR 1011 1608 -355 6 763 2978 20 0 28 chrX 23351548 23351904 -143298392 + ORR1A0 LTR MaLR 1 346 0 6 763 14098 47 11 3 chrX 23351905 23353683 -143296613 + ORR1A0-int LTR MaLR 2 1792 0 6 763 2988 20 0 23 chrX 23353683 23354037 -143296259 + ORR1A0 LTR MaLR 1 346 0 6 763 5217 145 10 105 chrX 23354037 23354485 -143295811 + ORR1A4-int LTR MaLR 1609 1962 -1 6 763 2022 105 25 13 chrX 23354485 23354802 -143295494 + ORR1A4 LTR MaLR 1 321 -8 6 763 240 356 17 119 chrX 23354826 23354944 -143295352 + B4A SINE B4 67 172 -120 6 763 235 153 0 48 chrX 23354956 23355018 -143295278 + A-rich Low_complexity Low_complexity 6 64 0 6 763 227 267 33 0 chrX 23355098 23355158 -143295138 + (CATA)n Simple_repeat Simple_repeat 3 64 0 6 763 350 330 30 0 chrX 23355169 23355269 -143295027 + RSINE1 SINE B4 2 104 -61 6 763 580 330 55 8 chrX 23355395 23355630 -143294666 - MIR SINE MIR -16 246 1 6 763 27 0 0 0 chrX 23356004 23356031 -143294265 + AT_rich Low_complexity Low_complexity 1 27 0 6 763 412 254 4 10 chrX 23356073 23356187 -143294109 + PB1D10 SINE Alu 2 117 -3 6 763 269 289 13 0 chrX 23356503 23356579 -143293717 + ID4 SINE ID 3 79 -4 6 763 311 0 0 25 chrX 23356583 23356623 -143293673 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 763 1214 48 0 0 chrX 23356693 23356840 -143293456 + B1_Mm SINE Alu 1 147 0 6 763 258 105 0 0 chrX 23356840 23356878 -143293418 + (A)n Simple_repeat Simple_repeat 1 38 0 6 763 991 130 7 0 chrX 23358098 23358244 -143292052 - B1_Mus2 SINE Alu 0 147 1 6 763 243 306 28 0 chrX 23358595 23358667 -143291629 + PB1D10 SINE Alu 43 116 -1 6 763 201 94 0 0 chrX 23358685 23358717 -143291579 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 6 763 1191 98 6 44 chrX 23359549 23359731 -143290565 - B2_Mm1t SINE B2 -18 175 1 6 763 463 280 30 8 chrX 23359783 23359916 -143290380 - B1F SINE Alu -11 138 3 6 763 28 0 0 0 chrX 23360731 23360759 -143289537 + AT_rich Low_complexity Low_complexity 1 28 0 6 763 21 0 0 0 chrX 23361359 23361380 -143288916 + AT_rich Low_complexity Low_complexity 1 21 0 6 763 25 51 0 0 chrX 23362677 23362716 -143287580 + AT_rich Low_complexity Low_complexity 1 39 0 6 763 234 0 0 0 chrX 23362837 23362863 -143287433 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 763 242 160 20 0 chrX 23362863 23362913 -143287383 + GA-rich Low_complexity Low_complexity 1 51 0 6 763 946 268 42 28 chrX 23362916 23363277 -143287019 - Lx9 LINE L1 -171 7473 7108 6 763 25 51 0 0 chrX 23363282 23363321 -143286975 + AT_rich Low_complexity Low_complexity 1 39 0 6 763 2080 223 81 11 chrX 23363413 23363943 -143286353 - Lx9 LINE L1 -524 7120 6554 6 763 368 286 244 30 chrX 23364543 23364777 -143285519 - MLT1L LTR MaLR -27 583 300 6 763 30 45 0 0 chrX 23365835 23365879 -143284417 + AT_rich Low_complexity Low_complexity 1 44 0 6 763 330 357 26 77 chrX 23366055 23366210 -143284086 - B1F2 SINE Alu -2 147 1 6 763 851 332 26 30 chrX 23366341 23366605 -143283691 + B4 SINE B4 26 288 -4 6 763 529 83 24 0 chrX 23366695 23366779 -143283517 + (TC)n Simple_repeat Simple_repeat 2 87 0 6 763 468 303 26 7 chrX 23366791 23366944 -143283352 - RSINE1 SINE B4 -7 158 3 6 763 596 216 134 25 chrX 23366988 23367226 -143283070 - L1MA5 LINE L1 0 6300 6037 6 763 261 0 0 0 chrX 23367253 23367282 -143283014 + (TG)n Simple_repeat Simple_repeat 1 29 0 6 763 286 156 50 38 chrX 23367346 23367426 -143282870 + Lx9 LINE L1 7563 7643 -1 6 763 193 312 24 48 chrX 23367515 23367599 -143282697 + MIR SINE MIR 15 96 -166 6 763 7388 88 22 4 chrX 23367609 23368674 -143281622 - L1_Mus3 LINE L1 0 6638 5558 6 763 1031 202 30 0 chrX 23368785 23368988 -143281308 + B3 SINE B2 2 210 -6 6 763 246 342 78 13 chrX 23369056 23369133 -143281163 + B3A SINE B2 64 145 -53 6 763 375 23 0 0 chrX 23369142 23369186 -143281110 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 763 237 108 0 0 chrX 23369726 23369763 -143280533 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 763 472 193 40 48 chrX 23369771 23369896 -143280400 - Lx9 LINE L1 -159 7485 7362 6 763 1168 193 232 16 chrX 23369910 23370216 -143280080 - ORR1D1 LTR MaLR 0 374 3 6 763 1037 215 29 0 chrX 23370548 23370757 -143279539 + B3 SINE B2 2 216 0 6 763 982 80 0 0 chrX 23370859 23370996 -143279300 + L1_Mus2 LINE L1 6430 6566 0 6 763 568 229 57 8 chrX 23371653 23371776 -143278520 - ID_B1 SINE B4 -8 216 88 6 763 561 306 137 20 chrX 23371863 23372060 -143278236 + MIR SINE MIR 33 252 -10 6 763 802 289 134 22 chrX 23372184 23372626 -143277670 - Kanga11a DNA Tc2 -460 510 3 6 763 1887 86 0 48 chrX 23372778 23373071 -143277225 - L1Md_F2 LINE L1 0 6582 6304 6 763 485 279 22 0 chrX 23373399 23373535 -143276761 + B1_Mur3 SINE Alu 3 141 -8 6 763 554 346 24 0 chrX 23373545 23373750 -143276546 + ID_B1 SINE B4 1 210 -14 6 763 328 345 27 0 chrX 23373916 23374026 -143276270 + PB1D9 SINE Alu 1 113 -7 6 763 821 268 26 0 chrX 23374340 23374534 -143275762 - B3 SINE B2 -9 207 9 6 763 921 241 25 30 chrX 23374536 23374771 -143275525 - B4A SINE B4 -58 234 1 6 763 288 373 50 25 chrX 23374800 23374921 -143275375 - PB1 SINE Alu -3 124 1 6 763 423 347 21 7 chrX 23374989 23375134 -143275162 + B1F SINE Alu 3 149 0 6 763 22 0 0 0 chrX 23376042 23376064 -143274232 + AT_rich Low_complexity Low_complexity 1 22 0 6 763 931 243 158 0 chrX 23376249 23376496 -143273800 - B4A SINE B4 -6 286 1 6 763 231 133 0 0 chrX 23376535 23376580 -143273716 + (TTTAA)n Simple_repeat Simple_repeat 4 48 0 6 763 241 207 52 0 chrX 23377287 23377345 -143272951 + tRNA-Ala-GCA tRNA tRNA 6 66 -9 6 763 21 0 0 0 chrX 23377702 23377723 -143272573 + AT_rich Low_complexity Low_complexity 1 21 0 6 763 203 280 18 184 chrX 23377736 23377850 -143272446 + MIR3 SINE MIR 113 207 -1 6 763 1645 27 0 0 chrX 23378357 23378545 -143271751 - B2_Mm1a SINE B2 -5 188 1 6 763 211 340 193 7 chrX 23378545 23378690 -143271606 - MIRc SINE MIR -9 259 88 6 763 471 264 45 39 chrX 23379822 23379976 -143270320 - RSINE1 SINE B4 -8 157 3 6 763 426 209 11 23 chrX 23381273 23381361 -143268935 + RSINE1 SINE B4 13 99 -66 6 763 183 224 122 0 chrX 23381938 23381987 -143268309 - L4 LINE RTE -1080 949 895 6 763 224 59 29 0 chrX 23383640 23383674 -143266622 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 763 592 235 30 22 chrX 23383675 23383810 -143266486 - B1_Mus1 SINE Alu -12 136 1 6 763 334 293 94 31 chrX 23383697 23383824 -143266472 - B4A SINE B4 -87 205 71 6 763 259 209 105 42 chrX 23384029 23384124 -143266172 + MT2B LTR ERVL 169 269 -332 6 763 246 260 167 24 chrX 23384124 23384150 -143266146 + ID_B1 SINE B4 86 224 0 6 763 288 274 0 0 chrX 23384153 23384215 -143266081 + ID4_ SINE ID 3 64 -19 6 763 4380 185 59 31 chrX 23384327 23385188 -143265108 - RMER13B LTR ERVK -23 885 1 6 763 184 329 136 32 chrX 23385221 23385375 -143264921 + MIRb SINE MIR 96 265 -3 6 763 303 28 0 0 chrX 23385487 23385523 -143264773 + (TTTTG)n Simple_repeat Simple_repeat 3 38 0 6 763 491 152 121 35 chrX 23385540 23385656 -143264640 - B1_Mur2 SINE Alu -22 127 2 6 763 249 57 0 0 chrX 23385693 23385728 -143264568 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 763 226 215 135 40 chrX 23385752 23385878 -143264418 - Charlie18a DNA MER1_type -128 214 77 6 763 533 319 24 38 chrX 23386372 23386662 -143263634 - B4A SINE B4 -4 288 3 6 763 2012 153 92 20 chrX 23386702 23387095 -143263201 - MTC LTR MaLR 0 421 1 6 763 488 280 215 22 chrX 23388055 23388278 -143262018 + B4A SINE B4 4 269 -23 6 763 290 280 107 24 chrX 23388359 23388509 -143261787 - L1MD3 LINE L1 -76 7919 7675 6 763 244 311 26 98 chrX 23388685 23388745 -143261551 - ORR1E LTR MaLR -217 142 86 6 763 844 214 19 63 chrX 23388745 23388950 -143261346 + B3A SINE B2 1 196 -2 6 763 244 311 26 98 chrX 23388950 23389042 -143261254 - ORR1E LTR MaLR -274 85 1 6 763 2073 182 53 38 chrX 23389425 23389843 -143260453 + Lx5 LINE L1 6610 7033 -17 6 763 2028 129 13 52 chrX 23389856 23390239 -143260057 - L1_Mm LINE L1 -1704 4179 3812 6 763 1950 106 66 28 chrX 23390240 23390560 -143259736 + Lx LINE L1 6322 6653 -1 6 763 1710 59 31 0 chrX 23391029 23391251 -143259045 - L1_Mus1 LINE L1 -2 6565 6337 6 763 673 206 15 7 chrX 23391259 23391396 -143258900 + B3A SINE B2 14 151 -47 6 763 1755 179 56 91 chrX 23391427 23391877 -143258419 - Lx4B LINE L1 -1 7057 6624 6 763 631 196 70 35 chrX 23392732 23392875 -143257421 + B1_Mur4 SINE Alu 3 150 0 6 763 723 146 7 14 chrX 23392876 23393022 -143257274 + GA-rich Low_complexity Low_complexity 3 147 0 6 763 399 353 53 35 chrX 23393041 23393440 -143256856 + L1MC4 LINE L1 6806 7211 -831 6 763 746 229 21 21 chrX 23393556 23393743 -143256553 + B3 SINE B2 2 188 -28 6 763 225 221 115 11 chrX 23394083 23394170 -143256126 + L1MD LINE L1 3926 4021 -2125 6 763 628 135 39 0 chrX 23394410 23394514 -143255782 + B1_Mur4 SINE Alu 42 149 -1 7 763 407 333 27 27 chrX 23394545 23394693 -143255603 + RSINE1 SINE B4 14 161 -4 7 763 3313 90 60 0 chrX 23394766 23395278 -143255018 - MusHAL1 LINE L1 -1648 1064 522 7 763 2850 65 233 2 chrX 23395997 23396413 -143253883 - RLTR1B LTR ERV1 0 512 1 7 763 7021 82 38 32 chrX 23396413 23397436 -143252860 - RLTR1B-int LTR ERV1 0 3299 2271 7 763 7074 65 2 114 chrX 23397436 23398231 -143252065 - L1Md_A LINE L1 0 6582 5795 7 763 531 14 0 0 chrX 23398231 23398305 -143251991 - B2_Mm1a SINE B2 -1 192 119 7 763 7074 65 2 114 chrX 23398305 23398655 -143251641 - L1Md_A LINE L1 0 5794 5447 7 763 3907 71 0 0 chrX 23398666 23399156 -143251140 - L1Md_T LINE L1 -3 6579 6090 7 763 8042 68 42 10 chrX 23399157 23400321 -143249975 - RLTR1B-int LTR ERV1 -2030 3033 1172 7 763 474 18 0 0 chrX 23400321 23400376 -143249920 + (TC)n Simple_repeat Simple_repeat 1 55 0 7 763 4191 208 110 100 chrX 23400376 23400823 -143249473 - RLTR1B-int LTR ERV1 -2137 1561 1109 7 763 1874 77 0 0 chrX 23401146 23401381 -143248915 - RLTR1B-int LTR ERV1 -2692 1006 772 7 763 417 20 0 0 chrX 23401662 23401712 -143248584 + (CAGA)n Simple_repeat Simple_repeat 2 51 0 7 763 3617 99 30 19 chrX 23401745 23402272 -143248024 - RLTR1B-int LTR ERV1 -7023 533 1 7 763 3164 55 178 9 chrX 23402272 23402710 -143247586 - RLTR1B LTR ERV1 0 512 1 7 763 414 0 0 0 chrX 23402793 23402839 -143247457 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 763 413 232 0 108 chrX 23404212 23404323 -143245973 - PB1D10 SINE Alu -8 109 11 7 763 1245 173 185 0 chrX 23404562 23404914 -143245382 - Lx9 LINE L1 -26 7618 7202 7 763 7435 123 16 19 chrX 23404921 23406127 -143244169 + L1_Mm LINE L1 2521 3722 -2161 7 763 7164 148 24 38 chrX 23406121 23408158 -143242138 - L1Md_F LINE L1 -3522 2361 357 7 763 349 285 13 9 chrX 23408133 23408291 -143242005 - L1VL1 LINE L1 -6147 275 151 7 763 1058 188 0 23 chrX 23408297 23408515 -143241781 - L1Md_F LINE L1 -747 5139 4927 7 763 284 68 0 0 chrX 23408511 23408555 -143241741 - L1VL1 LINE L1 -5357 1065 1022 7 763 7833 38 12 0 chrX 23408556 23409485 -143240811 - L1Md_F2 LINE L1 -2 6580 5641 7 763 6665 63 3 0 chrX 23409488 23410782 -143239514 - L1Md_F LINE L1 -3766 2117 820 7 763 2974 75 33 0 chrX 23410782 23411180 -143239116 + RLTR10A LTR ERVK 1 411 0 7 763 4934 91 27 6 chrX 23411182 23411857 -143238439 + RLTR10-int LTR ERVK 304 992 -995 7 763 561 296 31 27 chrX 23412021 23412278 -143238018 + RLTR10-int LTR ERVK 1309 1566 -6015 7 763 355 158 0 0 chrX 23412295 23412352 -143237944 + IAP-d-int LTR ERVK 447 503 -6039 7 763 1938 86 55 0 chrX 23412352 23412608 -143237688 + IAP-d-int LTR ERVK 5007 5276 -1266 7 763 432 97 0 0 chrX 23412609 23412671 -143237625 + (T)n Simple_repeat Simple_repeat 1 62 0 7 763 500 163 22 0 chrX 23412671 23412763 -143237533 - RLTR1B LTR ERV1 -76 436 343 7 763 423 53 0 0 chrX 23412767 23412824 -143237472 - RLTR1B LTR ERV1 -102 410 354 7 763 1791 32 5 23 chrX 23412836 23413057 -143237239 + IAP-d-int LTR ERVK 5311 5527 -1015 7 763 1644 74 5 5 chrX 23413061 23413279 -143237017 + IAP-d-int LTR ERVK 5667 5884 -658 7 763 4951 79 23 17 chrX 23413280 23413975 -143236321 + RLTR10-int LTR ERVK 1288 1986 -1 7 763 3230 48 30 0 chrX 23413975 23414374 -143235922 + RLTR10A LTR ERVK 1 411 0 7 763 3348 91 5 0 chrX 23414374 23414815 -143235481 - L1Md_F LINE L1 -5791 728 286 7 763 2636 199 25 6 chrX 23414821 23415383 -143234913 - L1Md_F LINE L1 -6479 1252 678 7 763 466 230 36 12 chrX 23415445 23415584 -143234712 - L1Md_F LINE L1 -5816 803 568 7 763 9486 97 15 11 chrX 23415584 23417062 -143233234 + RLTR22_Mus LTR ERVK 321 1804 -4 7 763 312 138 104 30 chrX 23417095 23417162 -143233134 - RMER12B LTR ERVK -156 1248 1177 7 763 410 145 0 14 chrX 23417214 23417284 -143233012 - RLTR14-int LTR ERV1 -198 5119 5051 7 763 3759 84 2 10 chrX 23417346 23417861 -143232435 + L1Md_F2 LINE L1 6070 6580 -2 7 763 10717 199 66 22 chrX 23417862 23420246 -143230050 - RLTR14-int LTR ERV1 -367 4950 2463 7 763 3980 171 3 8 chrX 23420255 23420973 -143229323 + Lx3B LINE L1 6006 6719 -254 7 763 263 318 46 78 chrX 23424021 23424239 -143226057 + RLTR41 LTR ERV1 191 401 -45 7 763 380 313 107 24 chrX 23424521 23424773 -143225523 - IAPLTR3-int LTR ERVK -3309 3512 3240 7 763 34904 92 6 11 chrX 23425379 23431778 -143218518 - L1Md_F2 LINE L1 0 6582 238 7 763 1939 29 16 12 chrX 23433534 23433776 -143216520 + L1Md_F3 LINE L1 6339 6581 -3 7 763 3382 133 37 4 chrX 23433796 23434223 -143216073 + Lx LINE L1 6088 6518 -136 7 763 204 40 0 0 chrX 23434223 23434248 -143216048 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 7 763 3382 133 37 4 chrX 23434248 23434363 -143215933 + Lx LINE L1 6519 6646 -8 7 763 1400 296 85 35 chrX 23434589 23435226 -143215070 + Lx9 LINE L1 6585 7253 -391 7 763 6975 159 102 72 chrX 23437024 23438747 -143211549 + ORR1A2-int LTR MaLR 18 1792 0 7 763 1557 146 0 0 chrX 23438755 23439008 -143211288 + ORR1A2 LTR MaLR 8 260 -67 7 763 1030 164 82 0 chrX 23439009 23439204 -143211092 + ORR1A2 LTR MaLR 117 327 0 7 763 296 330 35 0 chrX 23439353 23439468 -143210828 - MurSAT1 Satellite Satellite -1 119 1 7 763 6760 140 22 11 chrX 23440113 23441668 -143208628 + Lx LINE L1 5081 6654 0 7 763 32785 56 4 2 chrX 23441913 23447155 -143203141 - L1Md_F2 LINE L1 0 6582 1333 7 763 1033 219 15 15 chrX 23447166 23447435 -143202861 - L1Md_F2 LINE L1 -5680 936 668 7 763 432 223 33 8 chrX 23447504 23447626 -143202670 - L1Md_F LINE L1 -5816 703 579 7 763 9653 100 32 11 chrX 23447626 23449083 -143201213 + RLTR22_Mus LTR ERVK 321 1808 0 7 763 341 217 74 26 chrX 23449083 23449178 -143201118 - RMER12B LTR ERVK -143 1261 1177 7 763 14140 206 57 66 chrX 23449230 23453098 -143197198 - RLTR14-int LTR ERV1 -198 5119 1285 7 763 2154 235 50 90 chrX 23453185 23453938 -143196358 - RLTR14-int LTR ERV1 -4029 1288 566 7 763 593 61 0 12 chrX 23453941 23454024 -143196272 + (TTCTC)n Simple_repeat Simple_repeat 4 85 0 7 763 1553 252 40 97 chrX 23454060 23454640 -143195656 - RLTR14-int LTR ERV1 -4768 549 3 7 763 1538 249 6 42 chrX 23454642 23454999 -143195297 - RLTR14 LTR ERV1 0 382 39 7 763 1029 122 0 0 chrX 23455124 23455263 -143195033 + B1_Mus1 SINE Alu 1 139 -9 7 763 245 27 54 0 chrX 23455263 23455300 -143194996 + (CAAAC)n Simple_repeat Simple_repeat 2 40 0 7 763 308 333 10 0 chrX 23456077 23456173 -143194123 + (CA)n Simple_repeat Simple_repeat 2 98 0 7 763 513 121 0 0 chrX 23456180 23456263 -143194033 + (GA)n Simple_repeat Simple_repeat 2 84 0 7 763 6233 146 8 6 chrX 23457736 23458810 -143191486 + Lx3B LINE L1 5643 6719 -254 7 95 465 196 17 143 chrX 23461829 23461948 -143188348 + RMER19B LTR ERVK 284 387 -515 7 764 1544 194 138 20 chrX 23461970 23462360 -143187936 + MurERV4_19-int LTR ERVK 8 443 -5337 7 764 1491 239 55 29 chrX 23462374 23462571 -143187725 + MurERV4_19-int LTR ERVK 500 698 -5082 7 764 224 30 30 0 chrX 23462571 23462604 -143187692 + (TATTG)n Simple_repeat Simple_repeat 2 35 0 7 764 1491 239 55 29 chrX 23462604 23462790 -143187506 + MurERV4_19-int LTR ERVK 699 892 -4888 7 764 1524 155 75 4 chrX 23462818 23463084 -143187212 + RMER19B LTR ERVK 596 880 -22 7 764 3419 116 9 14 chrX 23463084 23463646 -143186650 - Lx3_Mus LINE L1 -385 6624 6066 7 764 2416 114 29 3 chrX 23463646 23464024 -143186272 + Lx3_Mus LINE L1 6622 7009 0 7 764 1083 95 7 0 chrX 23464045 23464192 -143186104 + B1_Mus1 SINE Alu 1 148 0 7 764 636 25 0 0 chrX 23464310 23464390 -143185906 - L1Md_F2 LINE L1 -291 6291 6212 7 764 2247 69 13 7 chrX 23464390 23464696 -143185600 + L1Md_F2 LINE L1 6274 6581 -1 7 764 260 332 33 5 chrX 23464719 23464891 -143185405 + MurSAT1 Satellite Satellite 1 176 -1 7 764 226 261 88 33 chrX 23465730 23465821 -143184475 - LTR81C LTR ERV1? -254 899 804 7 764 259 273 7 0 chrX 23466212 23466305 -143183991 + MurSAT1 Satellite Satellite 1 93 -11 7 764 287 295 9 0 chrX 23468517 23468622 -143181674 + L1MA4A LINE L1 5825 5930 -373 7 764 598 202 32 8 chrX 23468649 23468774 -143181522 - ORR1D2 LTR MaLR -241 129 2 7 764 1026 224 5 18 chrX 23468864 23469082 -143181214 + B3 SINE B2 1 215 -1 7 764 340 331 41 7 chrX 23469178 23469449 -143180847 - L1M2 LINE L1 -3289 2854 2575 7 764 978 288 63 102 chrX 23469449 23469570 -143180726 + MTE2b LTR MaLR 1 98 -281 7 764 864 130 0 0 chrX 23469570 23469708 -143180588 + (TTTC)n Simple_repeat Simple_repeat 3 140 0 7 764 978 288 63 102 chrX 23469708 23469980 -143180316 + MTE2b LTR MaLR 99 379 0 7 764 1081 84 0 7 chrX 23470141 23470285 -143180011 + B1_Mus1 SINE Alu 1 143 -5 7 764 23 0 0 0 chrX 23470313 23470336 -143179960 + AT_rich Low_complexity Low_complexity 1 23 0 7 764 1763 87 28 0 chrX 23470918 23471144 -143179152 - L1_Mm LINE L1 -290 5593 5368 7 764 3709 85 0 16 chrX 23471144 23471660 -143178636 + L1Md_F2 LINE L1 6064 6571 -11 7 764 1763 87 28 0 chrX 23471660 23471687 -143178609 - L1_Mm LINE L1 -516 5367 5334 7 764 300 83 0 0 chrX 23472445 23472493 -143177803 + (T)n Simple_repeat Simple_repeat 1 48 0 7 764 23968 117 76 10 chrX 23473662 23478938 -143171358 - L1_Mus2 LINE L1 -188 6378 725 7 764 352 266 23 15 chrX 23478944 23479074 -143171222 - L1_Mus2 LINE L1 -5811 805 675 7 764 9141 211 35 20 chrX 23479185 23480424 -143169872 - L1_Mur3 LINE L1 -1178 4702 3472 7 764 216 0 0 0 chrX 23480424 23480448 -143169848 + (TTG)n Simple_repeat Simple_repeat 2 25 0 7 764 9141 211 35 20 chrX 23480448 23481723 -143168573 - L1_Mur3 LINE L1 -2409 3471 2151 7 764 899 306 94 35 chrX 23482165 23482771 -143167525 - Lx9 LINE L1 -409 7235 6594 7 764 185 340 31 41 chrX 23482816 23482914 -143167382 + MIRb SINE MIR 93 189 -79 7 764 30 27 0 0 chrX 23483330 23483367 -143166929 + AT_rich Low_complexity Low_complexity 1 37 0 7 764 222 154 15 44 chrX 23486220 23486288 -143164008 + (TA)n Simple_repeat Simple_repeat 1 66 0 7 764 1368 281 63 76 chrX 23486578 23487364 -143162932 + RMER12 LTR ERVK 1 749 -1099 7 764 233 319 44 89 chrX 23487473 23487631 -143162665 + RMER12 LTR ERVK 942 1092 -230 7 764 4847 180 36 11 chrX 23488221 23489390 -143160906 + L1VL4 LINE L1 872 2049 -3837 7 764 528 16 0 0 chrX 23489390 23489451 -143160845 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 764 4847 188 35 8 chrX 23489451 23489705 -143160591 + L1VL4 LINE L1 2050 2335 -3551 7 764 1912 132 38 3 chrX 23489710 23490029 -143160267 - L1_Mus4 LINE L1 -6 6630 6301 7 764 15672 171 16 115 chrX 23490061 23496115 -143154181 + L1Md_F2 LINE L1 220 5586 -297 7 764 6993 90 21 2 chrX 23496115 23497080 -143153216 + L1Md_F2 LINE L1 5588 6570 -12 7 764 17986 118 4 1 chrX 23497100 23500000 -143150296 + L1_Mm LINE L1 2429 5338 -545 7 764 6751 96 2 2 chrX 23500003 23501227 -143149069 + L1_Mus2 LINE L1 5342 6565 -1 1 764 989 96 41 0 chrX 23501330 23501476 -143148820 + RMER17D LTR ERVK 1 152 -737 2 764 6958 116 41 39 chrX 23501583 23502841 -143147455 + RMER17A-int LTR ERVK 468 1728 0 2 764 1240 77 104 0 chrX 23502842 23503024 -143147272 + RMER17D LTR ERVK 1 201 -688 2 764 1832 105 11 11 chrX 23503024 23503303 -143146993 - RLTR9E LTR ERVK 0 409 131 3 764 765 136 27 0 chrX 23503294 23503441 -143146855 + RMER17D LTR ERVK 188 338 -551 2 764 1183 108 0 11 chrX 23503749 23503937 -143146359 - Lx3C LINE L1 -1027 5949 5764 4 764 4221 165 7 4 chrX 23503937 23504643 -143145653 + Lx3C LINE L1 6268 6975 -1 5 764 2395 227 58 0 chrX 23504695 23505311 -143144985 + Lx7 LINE L1 5137 5788 -92 6 764 243 329 35 58 chrX 23505929 23506100 -143144196 - RMER4A LTR ERVK -371 214 47 7 764 4497 265 48 3 chrX 23506252 23507521 -143142775 + Lx7 LINE L1 5907 7232 -464 6 764 1071 123 58 0 chrX 23507576 23507747 -143142549 - B2_Mm2 SINE B2 -14 181 1 8 764 740 262 65 27 chrX 23507747 23508041 -143142255 - L1_Rod LINE L1 -2946 2901 2597 9 764 306 206 109 27 chrX 23508074 23508184 -143142112 + Lx9 LINE L1 3419 3537 -2310 1 764 261 0 0 0 chrX 23508185 23508214 -143142082 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 764 466 76 0 0 chrX 23508259 23508325 -143141971 - L1_Mm LINE L1 -1517 4366 4301 1 764 4636 148 219 3 chrX 23508318 23509351 -143140945 + L1_Mur2 LINE L1 4325 5580 -297 1 764 7844 56 7 3 chrX 23509351 23510343 -143139953 + L1Md_F3 LINE L1 5587 6582 -2 1 764 540 267 65 20 chrX 23511004 23511157 -143139139 - RSINE1 SINE B4 -3 162 3 1 764 21 0 0 0 chrX 23511161 23511182 -143139114 + AT_rich Low_complexity Low_complexity 1 21 0 1 764 5380 244 58 45 chrX 23511227 23511935 -143138361 + Lx9 LINE L1 3582 4295 -1552 1 764 390 57 0 0 chrX 23511935 23511988 -143138308 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 764 5380 244 58 45 chrX 23511988 23512044 -143138252 + Lx9 LINE L1 4296 4362 -1485 1 764 1109 162 0 5 chrX 23512044 23512230 -143138066 + B2_Mm2 SINE B2 1 185 -10 1 764 5380 268 59 28 chrX 23512230 23515250 -143135046 + Lx9 LINE L1 4363 7643 -1 1 764 201 121 0 0 chrX 23516122 23516155 -143134141 + (T)n Simple_repeat Simple_repeat 1 33 0 1 764 3845 27 4 0 chrX 23516988 23517439 -143132857 - L1Md_T LINE L1 0 6582 6130 2 764 5927 101 12 50 chrX 23517522 23518460 -143131836 - RLTR13D6 LTR ERVK 0 902 1 2 764 335 336 53 15 chrX 23518790 23518923 -143131373 + MLT1A1 LTR MaLR 268 405 -3 2 764 1211 301 38 8 chrX 23520078 23520446 -143129850 - MTEb LTR MaLR 0 379 1 2 764 572 357 6 0 chrX 23520929 23521086 -143129210 - RSINE1 SINE B4 0 165 8 2 764 182 380 10 51 chrX 23521285 23521482 -143128814 - L2a LINE L2 0 3426 3238 2 764 1858 149 52 71 chrX 23521532 23522069 -143128227 + ORR1A1 LTR MaLR 1 386 -8 2 764 1664 244 71 80 chrX 23522140 23522874 -143127422 - RLTR14-int LTR ERV1 -4029 1288 562 2 764 280 293 12 0 chrX 23522927 23523009 -143127287 + (CA)n Simple_repeat Simple_repeat 2 84 0 2 764 16550 112 14 12 chrX 23523250 23526842 -143123454 + L1VL4 LINE L1 18 3554 -5 2 764 2289 160 79 33 chrX 23528101 23528423 -143121873 - RMER17A LTR ERVK -17 734 341 3 764 1040 64 7 0 chrX 23528423 23528564 -143121732 + (GA)n Simple_repeat Simple_repeat 1 142 0 3 764 2289 113 11 3 chrX 23528564 23528897 -143121399 - RMER17A LTR ERVK -411 340 6 3 764 2775 248 23 72 chrX 23529027 23529571 -143120725 + RLTR40 LTR ERVK 3 540 -277 3 764 660 48 0 0 chrX 23529571 23529655 -143120641 + (GA)n Simple_repeat Simple_repeat 1 84 0 3 764 2775 248 23 72 chrX 23529655 23529967 -143120329 + RLTR40 LTR ERVK 541 817 0 3 764 4818 134 66 28 chrX 23531077 23531946 -143118350 - RLTR13D6 LTR ERVK 0 902 1 3 764 374 181 21 0 chrX 23532178 23532272 -143118024 + Lx5 LINE L1 6951 7046 -4 3 764 217 235 0 0 chrX 23532285 23532319 -143117977 + B1_Mur4 SINE Alu 1 34 -116 3 764 633 237 57 0 chrX 23532726 23532903 -143117393 - Lx9 LINE L1 -243 7401 7215 3 764 437 154 22 0 chrX 23532916 23533007 -143117289 + Lx9 LINE L1 7551 7643 -1 3 764 931 231 14 0 chrX 23533010 23533226 -143117070 + Lx5 LINE L1 6825 7043 -7 3 764 622 234 15 0 chrX 23533246 23533383 -143116913 + B1_Mur4 SINE Alu 5 143 -7 3 764 1227 91 0 0 chrX 23533386 23533561 -143116735 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 4 764 232 291 13 0 chrX 23533593 23533672 -143116624 + Lx4B LINE L1 6809 6888 -170 4 764 26 30 0 0 chrX 23534013 23534046 -143116250 + AT_rich Low_complexity Low_complexity 1 33 0 4 764 1190 48 0 0 chrX 23536115 23536262 -143114034 - B1_Mm SINE Alu 0 147 1 4 764 2874 266 65 18 chrX 23536526 23537954 -143112342 + Lx6 LINE L1 5015 6729 -731 4 764 242 0 61 0 chrX 23537966 23537999 -143112297 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 764 6936 183 55 14 chrX 23538238 23539455 -143110841 + L1_Mur1 LINE L1 798 2047 -3839 4 764 547 14 28 0 chrX 23539455 23539527 -143110769 + (CA)n Simple_repeat Simple_repeat 2 75 0 4 764 6936 164 52 8 chrX 23539527 23540196 -143110100 + L1_Mur1 LINE L1 2048 2759 -3127 4 764 986 167 31 5 chrX 23540199 23540422 -143109874 + MusHAL1 LINE L1 1975 2203 -509 4 764 30157 95 4 7 chrX 23540426 23545599 -143104697 + L1Md_F2 LINE L1 446 5585 -298 4 764 7700 70 1 1 chrX 23545600 23546594 -143103702 + L1Md_F2 LINE L1 5587 6580 -2 4 764 482 242 13 20 chrX 23546611 23546763 -143103533 + MusHAL1 LINE L1 2184 2334 -378 5 764 342 165 0 0 chrX 23546763 23546842 -143103454 + T-rich Low_complexity Low_complexity 1 79 0 5 764 1092 83 0 0 chrX 23546856 23547000 -143103296 - B1_Mus2 SINE Alu -2 145 2 5 764 526 143 51 29 chrX 23547002 23547139 -143103157 + L1_Mur2 LINE L1 3515 3654 -2223 5 764 266 346 9 0 chrX 23547396 23547503 -143102793 - MurSAT1 Satellite Satellite -12 108 1 5 764 273 250 0 14 chrX 23547967 23548036 -143102260 - MurSAT1 Satellite Satellite -52 68 1 5 764 292 310 9 9 chrX 23549396 23549510 -143100786 - MurSAT1 Satellite Satellite -6 114 1 5 764 262 346 0 0 chrX 23550456 23550557 -143099739 - MurSAT1 Satellite Satellite -2 118 18 5 764 256 283 0 10 chrX 23550933 23551033 -143099263 - MurSAT1 Satellite Satellite -21 99 1 5 764 240 291 34 34 chrX 23551218 23551307 -143098989 - MurSAT1 Satellite Satellite -31 89 1 5 764 36084 6 0 1 chrX 23551434 23557419 -143092877 + L1Md_A LINE L1 1 5586 -297 6 764 8974 2 0 0 chrX 23557419 23558402 -143091894 + L1Md_A LINE L1 5587 6569 -13 6 764 286 303 16 11 chrX 23558418 23558556 -143091740 - MurSAT1 Satellite Satellite 0 138 1 6 764 240 254 0 0 chrX 23559099 23559158 -143091138 - MurSAT1 Satellite Satellite -1 119 61 6 764 2987 53 45 3 chrX 23559243 23559623 -143090673 + MTA_Mm LTR MaLR 1 396 0 6 764 234 218 18 18 chrX 23560429 23560485 -143089811 - MurSAT1 Satellite Satellite -48 72 17 6 764 237 341 0 11 chrX 23560595 23560687 -143089609 - MurSAT1 Satellite Satellite -28 92 2 6 764 272 310 35 6 chrX 23562408 23562547 -143087749 - MurSAT1 Satellite Satellite -1 143 1 6 764 1358 74 26 16 chrX 23562784 23562976 -143087320 + B2_Mm2 SINE B2 1 194 -1 6 764 181 214 70 18 chrX 23564144 23564201 -143086095 - L4 LINE RTE -1334 695 636 6 764 311 240 30 30 chrX 23566857 23566930 -143083366 + polypurine Low_complexity Low_complexity 3 78 0 6 764 1133 113 6 0 chrX 23566930 23567107 -143083189 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 6 764 311 240 30 30 chrX 23567107 23567132 -143083164 + polypurine Low_complexity Low_complexity 79 101 0 7 764 3475 172 29 3 chrX 23571505 23572157 -143078139 - L1_Mus4 LINE L1 -6 6630 5962 7 764 3494 15 5 0 chrX 23572253 23572647 -143077649 + MTA_Mm LTR MaLR 1 396 0 7 764 989 141 12 9 chrX 23573437 23573772 -143076524 + GA-rich Low_complexity Low_complexity 1 335 0 7 764 11565 162 33 10 chrX 23575988 23578012 -143072284 + L1VL4 LINE L1 194 2258 -1301 7 764 459 0 0 0 chrX 23578012 23578063 -143072233 + (TA)n Simple_repeat Simple_repeat 1 51 0 7 764 297 0 0 0 chrX 23578063 23578095 -143072201 + (GA)n Simple_repeat Simple_repeat 2 34 0 7 764 11565 128 18 9 chrX 23578095 23578785 -143071511 + L1VL4 LINE L1 2259 2969 -590 7 764 5465 170 4 38 chrX 23578786 23579907 -143070389 + L1_Mus4 LINE L1 4490 5572 -311 7 764 2225 139 0 11 chrX 23579903 23580282 -143070014 + L1_Mus4 LINE L1 5887 6261 -375 7 764 1905 145 60 81 chrX 23583109 23583506 -143066790 + RLTR9C LTR ERVK 1 389 -4 7 764 3189 167 83 103 chrX 23583641 23584828 -143065468 + ETnERV2-int LTR ERVK 108 2077 -5329 7 764 1591 149 209 14 chrX 23584861 23585281 -143065015 + ETnERV2-int LTR ERVK 2496 2997 -4409 7 764 930 146 0 18 chrX 23585281 23585449 -143064847 + RLTR13D1 LTR ERVK 486 650 -156 8 764 1516 60 127 0 chrX 23585538 23585892 -143064404 + SSU-rRNA_Hsa rRNA rRNA 537 935 -934 8 764 3891 151 20 10 chrX 23586125 23586896 -143063400 + ETnERV2-int LTR ERVK 3442 4085 -3321 7 764 2049 45 0 0 chrX 23586896 23587142 -143063154 + L1Md_F2 LINE L1 6332 6577 -5 8 764 3780 181 8 92 chrX 23587142 23588423 -143061873 + ETnERV2-int LTR ERVK 2356 3408 -1998 7 764 441 133 0 0 chrX 23588638 23588713 -143061583 + ETnERV2-int LTR ERVK 7331 7405 -1 7 764 2034 112 68 78 chrX 23588714 23589111 -143061185 + RLTR9C LTR ERVK 1 393 0 7 764 533 144 12 0 chrX 23589632 23589792 -143060504 + GA-rich Low_complexity Low_complexity 1 162 0 8 95 12179 33 3 0 chrX 23591674 23593197 -143057099 + L1_Mm LINE L1 4060 5586 -297 8 765 8359 37 1 0 chrX 23593197 23594192 -143056104 + L1Md_T LINE L1 5587 6582 0 8 765 3616 175 11 5 chrX 23596571 23597236 -143053060 - L1_Mus4 LINE L1 -6 6630 5962 8 765 771 110 22 39 chrX 23598113 23598293 -143052003 + GA-rich Low_complexity Low_complexity 4 180 0 8 765 6018 148 43 18 chrX 23599514 23600714 -143049582 + L1_Mus1 LINE L1 2884 4114 -1769 8 765 6978 103 4 0 chrX 23600707 23602199 -143048097 + L1_Mus1 LINE L1 5068 6564 -3 8 765 25772 137 14 16 chrX 23603090 23609526 -143040770 + L1_Mus3 LINE L1 218 6638 0 8 765 3646 62 8 0 chrX 23610545 23611043 -143039253 + L1Md_F3 LINE L1 5085 5586 -297 9 765 8351 33 3 7 chrX 23611043 23611283 -143039013 + L1Md_F3 LINE L1 5587 5826 -758 9 765 3531 23 0 0 chrX 23611283 23611679 -143038617 - MTA_Mm LTR MaLR 0 396 1 9 765 8351 33 3 7 chrX 23611679 23612440 -143037856 + L1Md_F3 LINE L1 5827 6584 0 9 765 3941 151 11 1 chrX 23613839 23614503 -143035793 - L1_Mus4 LINE L1 -6 6630 5961 9 765 451 165 29 0 chrX 23615377 23615480 -143034816 + GA-rich Low_complexity Low_complexity 2 107 0 9 765 198 91 0 0 chrX 23616633 23616666 -143033630 + (T)n Simple_repeat Simple_repeat 1 33 0 9 765 1689 186 113 0 chrX 23617667 23618012 -143032284 + MT2B LTR ERVL 1 384 -217 9 765 342 0 0 0 chrX 23618054 23618092 -143032204 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 765 254 91 0 0 chrX 23618092 23618125 -143032171 + MT2B LTR ERVL 544 576 -8 9 765 1846 201 9 40 chrX 23618129 23618549 -143031747 + ORR1A3-int LTR MaLR 1 407 -1556 9 765 1859 178 14 27 chrX 23618560 23618929 -143031367 + MERVL-int LTR ERVL 4017 4380 -1105 9 765 378 0 0 0 chrX 23620475 23620517 -143029779 + (TAG)n Simple_repeat Simple_repeat 2 43 0 9 765 22 35 0 0 chrX 23624231 23624260 -143026036 + AT_rich Low_complexity Low_complexity 1 29 0 1 765 342 0 0 0 chrX 23624607 23624645 -143025651 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 765 305 267 30 0 chrX 23624753 23624884 -143025412 + (TCTA)n Simple_repeat Simple_repeat 4 138 0 1 765 798 197 157 103 chrX 23624917 23625217 -143025079 + ORR1A3 LTR MaLR 3 318 -8 1 765 595 99 20 0 chrX 23625236 23625337 -143024959 + (TCTA)n Simple_repeat Simple_repeat 2 104 0 1 765 360 43 0 0 chrX 23625413 23625459 -143024837 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 765 268 259 17 0 chrX 23625495 23625553 -143024743 - RMER12 LTR ERVK -518 804 746 1 765 341 198 115 8 chrX 23625560 23625682 -143024614 - RLTR21 LTR ERVK -460 1112 978 1 765 260 294 43 14 chrX 23625678 23625747 -143024549 - RLTR21 LTR ERVK -1501 71 1 1 765 1704 293 13 36 chrX 23626113 23626747 -143023549 - Lx6 LINE L1 0 7460 6842 1 765 269 94 38 0 chrX 23626750 23626803 -143023493 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 1 765 2315 275 80 25 chrX 23626806 23627746 -143022550 - Lx6 LINE L1 -566 6894 5904 1 765 1688 263 14 19 chrX 23627751 23628174 -143022122 - MTC LTR MaLR 0 421 1 1 765 470 179 34 17 chrX 23628176 23628295 -143022001 - Lx7 LINE L1 -1795 5901 5781 1 765 8116 25 0 1 chrX 23628288 23629730 -143020566 - L1Md_T LINE L1 -1 6581 5141 1 765 1186 206 4 8 chrX 23629732 23629996 -143020300 - Lx7 LINE L1 -75 5805 5543 1 765 231 289 92 131 chrX 23630000 23630283 -143020013 + RMER10A LTR ERVL 146 417 -25 1 765 561 302 14 136 chrX 23630299 23630644 -143019652 - RMER10A LTR ERVL -18 424 122 1 765 979 115 7 0 chrX 23630653 23630801 -143019495 - Lx5 LINE L1 -1263 5787 5639 1 765 549 103 36 45 chrX 23630818 23630930 -143019366 - L1_Rod LINE L1 -1938 3909 3799 1 765 1363 218 62 36 chrX 23630993 23631431 -143018865 - L1_Rod LINE L1 -123 5724 5276 1 765 279 211 77 11 chrX 23631449 23631540 -143018756 - Lx9 LINE L1 -7 7637 7541 1 765 450 269 54 21 chrX 23631589 23631775 -143018521 - L1_Rod LINE L1 -637 5210 5019 1 765 1701 205 16 29 chrX 23631779 23632161 -143018135 - RLTR14 LTR ERV1 -3 379 3 1 765 551 124 10 20 chrX 23632181 23632280 -143018016 - RLTR14-int LTR ERV1 0 5317 5220 1 765 4333 204 88 26 chrX 23632298 23633508 -143016788 - RLTR14-int LTR ERV1 -201 5116 3832 1 765 899 121 10 1 chrX 23633519 23633682 -143016614 - ORR1A2-int LTR MaLR -1339 170 4 1 765 1774 176 12 3 chrX 23633685 23634009 -143016287 - ORR1A2 LTR MaLR 0 327 1 1 765 686 249 78 19 chrX 23634185 23634390 -143015906 - RLTR14-int LTR ERV1 -3673 1644 1428 1 765 2531 201 82 16 chrX 23634390 23635094 -143015202 - MusHAL1 LINE L1 -1367 1345 595 1 765 1274 215 139 44 chrX 23635095 23635577 -143014719 + RMER17C-int LTR ERVK 2 529 -2709 1 765 201 195 0 0 chrX 23635858 23635899 -143014397 + CT-rich Low_complexity Low_complexity 2 42 0 1 765 637 211 242 31 chrX 23636458 23636844 -143013452 + RMER17C-int LTR ERVK 1511 1978 -1260 1 765 750 184 25 0 chrX 23636860 23637018 -143013278 + RMER17C-int LTR ERVK 2170 2331 -907 1 765 719 136 278 22 chrX 23637026 23637206 -143013090 + RMER17C-int LTR ERVK 2532 2757 -481 1 765 2822 93 10 27 chrX 23637256 23637664 -143012632 + RLTR9D LTR ERVK 1 401 -2 1 765 1432 161 114 3 chrX 23637665 23637971 -143012325 + RMER17C-int LTR ERVK 2899 3238 0 1 765 493 251 36 20 chrX 23637974 23638226 -143012070 + RMER17C LTR ERVK 183 438 -520 1 765 1080 159 69 72 chrX 23638209 23638541 -143011755 + RMER17C LTR ERVK 80 410 0 1 765 3475 162 31 12 chrX 23638541 23639810 -143010486 - L1_Mur1 LINE L1 -4060 1826 91 1 765 27833 90 25 20 chrX 23639810 23640691 -143009605 - ETnERV3-int LTR ERVK -908 4900 4011 1 765 234 0 0 0 chrX 23640691 23640717 -143009579 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1 765 27833 135 25 19 chrX 23640717 23645028 -143005268 - ETnERV3-int LTR ERVK -1798 4010 186 1 765 1131 106 22 11 chrX 23645573 23645755 -143004541 - ETnERV3-int LTR ERVK -5622 186 3 1 765 4433 160 27 26 chrX 23645759 23646612 -143003684 - RLTR13A LTR ERVK 0 855 2 1 765 504 177 42 0 chrX 23646616 23646712 -143003584 - RLTR13B1 LTR ERVK -793 100 1 1 765 275 118 19 19 chrX 23646712 23646764 -143003532 - L1_Mur1 LINE L1 -6250 732 681 1 765 8239 221 51 3 chrX 23646764 23648994 -143001302 - L1_Mur1 LINE L1 -1137 4749 2413 1 765 1213 230 42 31 chrX 23649010 23649396 -143000900 - L1_Mur3 LINE L1 -3851 2029 1640 1 765 242 430 11 11 chrX 23649534 23649794 -143000502 - RMER1C Other Other -469 873 540 1 765 307 423 6 7 chrX 23651449 23651801 -142998495 - RMER1C Other Other -536 806 381 1 765 267 386 23 0 chrX 23652492 23652624 -142997672 - RMER1C Other Other -748 594 460 1 765 2372 101 0 0 chrX 23652688 23653045 -142997251 + L1_Mus4 LINE L1 5615 5971 -665 1 765 6058 101 24 22 chrX 23653043 23653987 -142996309 + L1_Mus2 LINE L1 5282 6230 -336 1 765 369 0 0 0 chrX 23653987 23654028 -142996268 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 1 765 6058 92 32 30 chrX 23654028 23654368 -142995928 + L1_Mus2 LINE L1 6231 6564 -2 1 765 6464 54 5 29 chrX 23654634 23655476 -142994820 - RLTR13B2 LTR ERVK 0 822 1 1 765 12697 112 53 16 chrX 23655490 23657205 -142993091 - ETnERV3-int LTR ERVK -28 5780 4010 1 765 422 18 18 0 chrX 23657205 23657260 -142993036 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 1 765 12697 112 53 16 chrX 23657260 23657712 -142992584 - ETnERV3-int LTR ERVK -1799 4009 3536 1 765 5881 64 32 4 chrX 23657716 23658505 -142991791 - L1Md_F2 LINE L1 0 6582 5772 1 765 7323 72 0 0 chrX 23658505 23659512 -142990784 - L1Md_F2 LINE L1 -552 5331 4325 1 765 20608 103 19 35 chrX 23659512 23663025 -142987271 - ETnERV3-int LTR ERVK -2258 3550 186 1 765 1048 127 16 27 chrX 23663202 23663388 -142986908 - ETnERV3-int LTR ERVK -5622 186 3 1 765 6499 50 5 29 chrX 23663393 23664232 -142986064 - RLTR13B2 LTR ERVK -3 819 1 1 765 494 369 32 28 chrX 23664845 23665197 -142985099 - RMER1C Other Other -541 801 393 1 765 1568 22 22 0 chrX 23665443 23665624 -142984672 + B2_Mm1a SINE B2 2 186 -7 1 765 1037 64 21 7 chrX 23666232 23666373 -142983923 + B1_Mus1 SINE Alu 1 143 -5 1 765 602 258 162 29 chrX 23666429 23666669 -142983627 - RLTR10A LTR ERVK 0 411 140 1 765 1797 204 16 26 chrX 23666704 23667115 -142983181 - RLTR45-int LTR ERVK -202 7042 6529 1 765 1232 296 55 41 chrX 23667325 23668034 -142982262 - MMERVK10C-int LTR ERVK -2050 5531 4483 1 765 724 310 56 44 chrX 23668115 23668922 -142981374 - MMERVK10C-int LTR ERVK -3237 4344 3343 1 765 354 275 62 28 chrX 23668955 23669131 -142981165 - MMERVK10C-int LTR ERVK -4124 2418 2237 1 765 406 211 61 52 chrX 23669455 23669570 -142980726 - RLTR10-int LTR ERVK -1554 433 318 1 765 552 237 183 50 chrX 23669586 23669826 -142980470 - RLTR10A LTR ERVK 0 411 140 1 765 369 0 0 0 chrX 23669890 23669931 -142980365 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 765 351 0 0 0 chrX 23669931 23669969 -142980327 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 765 537 257 7 21 chrX 23670049 23670192 -142980104 - Lx8 LINE L1 -691 6782 6642 1 765 1006 309 51 3 chrX 23670359 23670709 -142979587 - ORR1D2 LTR MaLR -3 367 1 1 765 732 276 9 18 chrX 23670813 23671031 -142979265 + L1_Mur3 LINE L1 2265 2480 -3397 1 765 1191 221 37 7 chrX 23671029 23671325 -142978971 + L1_Mur3 LINE L1 3508 3812 -2068 1 765 6908 142 49 31 chrX 23671337 23673235 -142977061 + L1Md_F LINE L1 377 2310 -3573 1 765 7078 84 38 0 chrX 23673261 23674208 -142976088 - Lx3_Mus LINE L1 0 7009 6027 1 765 198 0 0 0 chrX 23675185 23675207 -142975089 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1 765 11902 90 18 16 chrX 23675216 23677574 -142972722 - L1Md_F2 LINE L1 0 6582 4225 1 765 10991 79 3 47 chrX 23677557 23679252 -142971044 - L1Md_F2 LINE L1 -2718 3165 1546 1 765 24704 35 0 3 chrX 23679245 23682873 -142967423 - L1Md_T LINE L1 0 6582 2971 1 765 4339 161 9 21 chrX 23682869 23684038 -142966258 - L1Md_F2 LINE L1 -4302 1581 446 1 765 795 147 12 43 chrX 23684041 23684204 -142966092 - RLTR21 LTR ERVK -855 717 560 1 765 1517 208 21 45 chrX 23684256 23684588 -142965708 - RLTR21 LTR ERVK -1248 324 1 1 765 260 276 8 39 chrX 23684952 23685080 -142965216 - Lx6 LINE L1 -5 7455 7332 1 765 1659 269 20 30 chrX 23685072 23685314 -142964982 - Lx6 LINE L1 -1319 6141 5904 1 765 2228 198 17 14 chrX 23685314 23685734 -142964562 - MTC LTR MaLR 0 421 1 1 765 1659 269 20 30 chrX 23685734 23686031 -142964265 - Lx6 LINE L1 -1557 5903 5607 1 765 1193 195 24 17 chrX 23686038 23686325 -142963971 - L1_Mur3 LINE L1 -2593 3287 2999 1 765 4040 139 21 24 chrX 23686326 23686857 -142963439 - L1_Mus3 LINE L1 -7 6631 6101 1 765 2886 64 0 3 chrX 23686857 23687200 -142963096 - ORR1A1 LTR MaLR -4 342 1 1 765 4040 139 21 24 chrX 23687200 23687324 -142962972 - L1_Mus3 LINE L1 -538 6100 5978 1 765 2452 64 3 6 chrX 23687324 23687638 -142962658 + L1Md_F2 LINE L1 5273 5585 -298 1 765 7793 73 6 13 chrX 23687639 23688639 -142961657 + L1Md_F2 LINE L1 5587 6579 -3 1 765 1229 315 44 48 chrX 23688639 23689179 -142961117 - RodERV21-int LTR ERV1 -3327 1664 1127 1 765 405 247 50 43 chrX 23690670 23690831 -142959465 - L1_Rod LINE L1 -305 5542 5381 1 765 2190 213 69 32 chrX 23690831 23691385 -142958911 + RLTR31A_Mm LTR ERVK 11 584 0 1 765 297 209 105 0 chrX 23691385 23691490 -142958806 - L1_Rod LINE L1 -475 5372 5257 1 765 758 206 0 70 chrX 23691601 23691614 -142958682 - B1_Mus1 SINE Alu 0 148 139 1 765 186 43 0 0 chrX 23691614 23691637 -142958659 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1 765 758 206 0 70 chrX 23691637 23691780 -142958516 - B1_Mus1 SINE Alu -10 138 3 1 765 3683 325 36 42 chrX 23692224 23692515 -142957781 - RodERV21-int LTR ERV1 -198 4793 4499 1 765 2774 111 35 56 chrX 23692515 23692944 -142957352 - RLTR9B2 LTR ERVK 0 420 1 1 765 3683 325 36 42 chrX 23692944 23694553 -142955743 - RodERV21-int LTR ERV1 -493 4498 2905 1 765 1140 263 10 17 chrX 23695137 23695439 -142954857 - MuRRS4-int LTR ERV1 -128 4935 4636 1 765 758 217 0 6 chrX 23695430 23695588 -142954708 - RLTR1B-int LTR ERV1 -119 4944 4788 1 765 8230 135 39 85 chrX 23695579 23697870 -142952426 - RLTR1B-int LTR ERV1 -792 4271 1116 1 765 1555 251 120 11 chrX 23697936 23698401 -142951895 - MuRRS4-int LTR ERV1 -3619 1444 929 1 765 829 228 23 77 chrX 23698503 23698764 -142951532 + LSU-rRNA_Hsa rRNA rRNA 3424 3670 -1365 1 765 581 159 96 17 chrX 23698764 23698879 -142951417 - MuRRS4-int LTR ERV1 -4190 873 750 1 765 441 166 70 45 chrX 23698863 23698981 -142951315 - RMER16-int LTR ERVK -3958 1448 1354 1 765 4256 133 38 9 chrX 23699067 23699744 -142950552 - RMER16-int LTR ERVK -4045 1361 665 1 765 908 242 22 36 chrX 23699769 23700103 -142950193 - MuRRS4-int LTR ERV1 -3770 920 342 1 765 690 249 52 79 chrX 23700419 23700968 -142949328 - MuRRS4-int LTR ERV1 -4565 498 7 1 765 731 280 42 13 chrX 23700973 23701216 -142949080 - LTRIS4 LTR ERV1 0 519 276 1 765 500 352 23 40 chrX 23702016 23702495 -142947801 - RodERV21-int LTR ERV1 -3035 4056 3586 1 765 1360 275 19 49 chrX 23702624 23703052 -142947244 - RodERV21-int LTR ERV1 -2273 2718 2304 1 765 4750 98 23 0 chrX 23703057 23703722 -142946574 - L1_Mus3 LINE L1 -247 6391 5712 1 765 1537 129 4 4 chrX 23703724 23703950 -142946346 + L1_Mus3 LINE L1 5473 5698 -185 1 765 1561 196 9 42 chrX 23703950 23704214 -142946082 - RLTR14 LTR ERV1 -51 331 78 1 765 6984 38 70 2 chrX 23704214 23705015 -142945281 - RLTR13A LTR ERVK 0 855 1 1 765 1561 196 9 42 chrX 23705015 23705086 -142945210 - RLTR14 LTR ERV1 -305 77 7 1 765 518 185 0 11 chrX 23705112 23705205 -142945091 - RLTR14-int LTR ERV1 -6 5311 5220 1 765 5201 173 64 29 chrX 23705230 23706297 -142943999 - RLTR14-int LTR ERV1 -207 5110 4007 1 765 295 148 0 0 chrX 23706513 23706567 -142943729 + ETnERV2-int LTR ERVK 141 194 -5212 1 765 2937 206 57 54 chrX 23706576 23707695 -142942601 + ETnERV2-int LTR ERVK 979 3135 -4271 1 765 33179 81 6 10 chrX 23707696 23710840 -142939456 - L1Md_F2 LINE L1 -14 6568 3450 1 765 8258 45 18 2 chrX 23710840 23711783 -142938513 + RLTR13A2 LTR ERVK 1 958 0 1 765 1179 92 61 0 chrX 23711789 23711952 -142938344 - B2_Mm2 SINE B2 -19 176 4 1 765 33179 110 18 18 chrX 23711952 23715108 -142935188 - L1Md_F2 LINE L1 -2434 3449 277 1 765 1421 176 52 0 chrX 23715109 23715359 -142934937 - L1VL1 LINE L1 -6157 265 3 1 765 22253 139 8 3 chrX 23715360 23716197 -142934099 + L1_Mus1 LINE L1 2294 3132 -2751 1 765 243 0 0 0 chrX 23716197 23716224 -142934072 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 765 22253 129 7 3 chrX 23716224 23719211 -142931085 + L1_Mus1 LINE L1 3133 6136 -431 1 765 1271 70 0 0 chrX 23719211 23719369 -142930927 + L1_Mus1 LINE L1 6410 6567 0 1 765 1678 183 20 90 chrX 23719369 23719825 -142930471 + L1_Mur2 LINE L1 3320 3743 -2134 1 765 768 306 95 26 chrX 23719800 23720213 -142930083 - Lx6 LINE L1 -164 7296 6793 1 765 402 269 22 7 chrX 23720218 23720353 -142929943 - L1_Mur2 LINE L1 -1407 4470 4334 1 765 22 0 0 0 chrX 23720638 23720660 -142929636 + AT_rich Low_complexity Low_complexity 1 22 0 1 765 192 40 0 0 chrX 23722055 23722080 -142928216 + (CTTTG)n Simple_repeat Simple_repeat 3 27 0 1 765 185 0 40 0 chrX 23722525 23722550 -142927746 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1 765 1226 136 15 0 chrX 23722561 23722767 -142927529 - L1_Mus4 LINE L1 0 6636 6428 1 95 38502 63 3 37 chrX 23722773 23729495 -142920801 - L1Md_A LINE L1 0 6582 98 1 766 1150 211 21 17 chrX 23729603 23729893 -142920403 + L1_Mur2 LINE L1 3805 4095 -1782 1 766 2813 154 45 16 chrX 23729893 23730336 -142919960 + RLTR22_Mur LTR ERVK 1 442 -1406 2 766 523 78 0 22 chrX 23730336 23730428 -142919868 + (CTA)n Simple_repeat Simple_repeat 3 92 0 2 766 2813 154 45 16 chrX 23730428 23730559 -142919737 + RLTR22_Mur LTR ERVK 443 591 -1257 2 766 306 276 50 66 chrX 23730684 23730882 -142919414 + RLTR46 LTR ERVK 126 320 0 2 766 281 175 60 60 chrX 23731169 23731236 -142919060 + IAPLTR3-int LTR ERVK 379 445 -6376 2 766 38964 189 18 7 chrX 23731222 23735809 -142914487 + IAPEY3-int LTR ERVK 246 4921 -2759 2 766 3500 25 2 0 chrX 23735809 23736204 -142914092 + MTA_Mm LTR MaLR 1 396 0 2 766 38964 179 18 6 chrX 23736204 23738941 -142911355 + IAPEY3-int LTR ERVK 4922 7680 0 2 766 278 282 56 50 chrX 23739069 23739248 -142911048 + RLTR46 LTR ERVK 126 305 -15 2 766 6539 131 42 27 chrX 23739266 23740513 -142909783 + RLTR22_Mur LTR ERVK 583 1848 0 2 766 2946 173 36 2 chrX 23740513 23741103 -142909193 + L1_Mur2 LINE L1 4092 4701 -1176 1 766 24 0 0 0 chrX 23741107 23741131 -142909165 + AT_rich Low_complexity Low_complexity 1 24 0 2 766 824 242 19 14 chrX 23741139 23741353 -142908943 - Lx4B LINE L1 -35 7023 6809 2 766 240 214 0 18 chrX 23741361 23741418 -142908878 + T-rich Low_complexity Low_complexity 4 59 0 2 766 23 0 0 0 chrX 23741484 23741507 -142908789 + AT_rich Low_complexity Low_complexity 1 23 0 2 766 1964 142 29 17 chrX 23741507 23741858 -142908438 - L1_Mus3 LINE L1 0 6638 6284 2 766 651 208 34 14 chrX 23741884 23742030 -142908266 - B1_Mur3 SINE Alu 0 149 1 2 766 518 293 13 0 chrX 23742083 23742233 -142908063 - Lx5 LINE L1 -74 6976 6825 2 766 424 193 0 0 chrX 23742237 23742325 -142907971 - Lx9 LINE L1 -2 7642 7555 2 766 710 241 57 10 chrX 23742325 23742518 -142907778 + Lx9 LINE L1 7200 7401 -243 2 766 23 0 0 0 chrX 23743476 23743499 -142906797 + AT_rich Low_complexity Low_complexity 1 23 0 2 766 1077 96 0 0 chrX 23744062 23744218 -142906078 + (TTC)n Simple_repeat Simple_repeat 2 157 0 2 766 249 33 0 0 chrX 23744218 23744248 -142906048 + (TTA)n Simple_repeat Simple_repeat 2 31 0 2 766 1905 250 53 63 chrX 23744439 23744501 -142905795 - RLTR40 LTR ERVK 0 817 753 2 766 6530 86 24 5 chrX 23744501 23745377 -142904919 + RLTR13B1 LTR ERVK 1 893 0 2 766 1905 250 53 63 chrX 23745377 23745533 -142904763 - RLTR40 LTR ERVK -65 752 607 2 766 1195 74 17 0 chrX 23745533 23745708 -142904588 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 2 766 1905 250 53 63 chrX 23745708 23746292 -142904004 - RLTR40 LTR ERVK -211 606 22 2 766 3556 196 50 18 chrX 23747737 23748478 -142901818 + RLTR14-int LTR ERV1 2436 3200 -2117 2 766 767 203 0 0 chrX 23748509 23748632 -142901664 - MMETn-int LTR ERVK -745 6661 6539 2 766 3354 177 12 57 chrX 23748627 23749539 -142900757 - MMETn-int LTR ERVK -1703 3141 2554 2 766 180 0 0 0 chrX 23749539 23749559 -142900737 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2 766 4744 67 3 5 chrX 23749569 23750173 -142900123 - L1Md_F2 LINE L1 -14 6568 5966 2 766 3354 165 46 64 chrX 23750173 23750269 -142900027 - MMETn-int LTR ERVK -2291 2553 2473 2 766 31686 91 2 11 chrX 23750324 23755777 -142894519 + L1Md_F2 LINE L1 187 5586 -297 2 766 7935 58 4 1 chrX 23755778 23756768 -142893528 + L1Md_F2 LINE L1 5588 6580 -2 2 766 812 217 148 25 chrX 23756787 23757103 -142893193 - ETnERV2-int LTR ERVK -2293 4951 4597 2 766 3899 132 33 3 chrX 23757089 23757718 -142892578 - ETnERV2-int LTR ERVK -3318 4088 3441 2 766 869 147 12 58 chrX 23757943 23758116 -142892180 - MMETn-int LTR ERVK -2654 2190 2026 2 766 568 98 0 0 chrX 23758124 23758198 -142892098 + L1_Mm LINE L1 5513 5615 -2170 2 766 7869 56 6 3 chrX 23758198 23759178 -142891118 + L1Md_F2 LINE L1 5587 6569 -13 2 766 316 275 21 21 chrX 23759178 23759196 -142891100 + L1_Mm LINE L1 5616 5633 -2152 2 766 2858 216 57 55 chrX 23759200 23760302 -142889994 - ETnERV2-int LTR ERVK -4271 3135 979 2 766 292 148 0 0 chrX 23760323 23760377 -142889919 - ETnERV2-int LTR ERVK -5212 194 141 2 766 5159 174 62 27 chrX 23760593 23761660 -142888636 + RLTR14-int LTR ERV1 4007 5110 -207 2 766 513 185 0 11 chrX 23761685 23761778 -142888518 + RLTR14-int LTR ERV1 5220 5311 -6 2 766 1452 196 9 42 chrX 23761804 23761875 -142888421 + RLTR14 LTR ERV1 7 77 -305 2 766 6666 38 70 2 chrX 23761875 23762676 -142887620 + RLTR13A LTR ERVK 1 855 0 2 766 1452 196 9 42 chrX 23762676 23762940 -142887356 + RLTR14 LTR ERV1 78 331 -51 2 766 1535 129 4 4 chrX 23762940 23763166 -142887130 - L1_Mus3 LINE L1 -185 5698 5473 2 766 4747 98 23 0 chrX 23763168 23763833 -142886463 + L1_Mus3 LINE L1 5712 6391 -247 2 766 1365 275 19 49 chrX 23763838 23764266 -142886030 + RodERV21-int LTR ERV1 2304 2718 -2273 2 766 484 352 23 40 chrX 23764395 23764874 -142885422 + RodERV21-int LTR ERV1 3586 4056 -3035 2 766 659 276 42 9 chrX 23765700 23765916 -142884380 + LTRIS4 LTR ERV1 285 507 0 2 766 698 253 49 78 chrX 23765921 23766470 -142883826 + MuRRS4-int LTR ERV1 7 498 -4565 2 766 1221 243 66 22 chrX 23766806 23767126 -142883170 + MuRRS4-int LTR ERV1 342 675 -4388 2 766 4235 132 37 9 chrX 23767145 23767823 -142882473 + RMER16-int LTR ERVK 665 1361 -4045 2 766 434 166 70 45 chrX 23767909 23768027 -142882269 + RMER16-int LTR ERVK 1354 1448 -3958 2 766 606 162 92 17 chrX 23768011 23768130 -142882166 + MuRRS4-int LTR ERV1 750 877 -4186 2 766 847 232 16 78 chrX 23768130 23768387 -142881909 - LSU-rRNA_Hsa rRNA rRNA -1371 3664 3424 2 766 1579 248 120 11 chrX 23768491 23768956 -142881340 + MuRRS4-int LTR ERV1 929 1444 -3619 2 766 952 142 9 68 chrX 23768935 23769016 -142881280 + MuRRS4-int LTR ERV1 1640 1711 -3352 2 766 880 57 0 16 chrX 23769016 23769141 -142881155 + (GA)n Simple_repeat Simple_repeat 1 123 0 2 766 5499 149 69 25 chrX 23769141 23771369 -142878927 + MuRRS4-int LTR ERV1 1172 4271 -792 2 766 754 217 0 6 chrX 23771360 23771518 -142878778 + MuRRS4-int LTR ERV1 4788 4944 -119 2 766 1134 263 10 17 chrX 23771509 23771811 -142878485 + MuRRS4-int LTR ERV1 4636 4935 -128 2 766 3622 326 36 42 chrX 23772395 23774004 -142876292 + RodERV21-int LTR ERV1 2905 4498 -493 2 766 2613 111 35 56 chrX 23774004 23774433 -142875863 + RLTR9B2 LTR ERVK 1 420 0 2 766 3622 326 36 42 chrX 23774433 23774724 -142875572 + RodERV21-int LTR ERV1 4499 4793 -198 2 766 686 206 0 70 chrX 23775168 23775311 -142874985 + B1_Mus1 SINE Alu 3 138 -10 2 766 186 43 0 0 chrX 23775311 23775334 -142874962 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2 766 686 206 0 70 chrX 23775334 23775347 -142874949 + B1_Mus1 SINE Alu 139 148 0 2 766 287 209 105 0 chrX 23775458 23775563 -142874733 + L1_Rod LINE L1 5257 5372 -475 2 766 2002 221 65 29 chrX 23775563 23776117 -142874179 - RLTR31A_Mm LTR ERVK 0 584 11 2 766 400 247 50 43 chrX 23776117 23776278 -142874018 + L1_Rod LINE L1 5381 5542 -305 2 766 1141 314 33 37 chrX 23777816 23778362 -142871934 + RodERV21-int LTR ERV1 1121 1664 -3327 2 766 4421 88 134 27 chrX 23778374 23779085 -142871211 - L1Md_F2 LINE L1 -13 6569 5783 2 766 7701 35 16 0 chrX 23779085 23780369 -142869927 - L1Md_T LINE L1 -5 6577 5273 2 766 3606 149 21 24 chrX 23780369 23780493 -142869803 + L1_Mus3 LINE L1 5978 6099 -539 2 766 2507 93 0 6 chrX 23780493 23780837 -142869459 + ORR1A1 LTR MaLR 1 342 -4 2 766 3606 149 21 24 chrX 23780837 23781367 -142868929 + L1_Mus3 LINE L1 6100 6630 -8 2 766 994 204 32 4 chrX 23781369 23781650 -142868646 + L1_Mur3 LINE L1 2999 3287 -2593 2 766 1483 256 39 44 chrX 23781668 23781953 -142868343 + Lx6 LINE L1 5618 5903 -1557 2 766 2027 189 21 17 chrX 23781953 23782372 -142867924 + MTC LTR MaLR 1 421 0 2 766 1483 256 39 44 chrX 23782372 23782606 -142867690 + Lx6 LINE L1 5904 6134 -1326 2 766 240 307 0 17 chrX 23782606 23782722 -142867574 + Lx6 LINE L1 7332 7445 -15 2 766 1487 226 18 36 chrX 23783101 23783431 -142866865 + RLTR21 LTR ERVK 1 324 -1248 2 766 855 154 11 51 chrX 23783471 23783649 -142866647 + RLTR21 LTR ERVK 547 717 -855 2 766 12716 107 6 36 chrX 23783652 23786477 -142863819 + L1Md_F2 LINE L1 446 3165 -2718 2 766 9421 88 1 1 chrX 23786460 23787822 -142862474 + L1Md_F2 LINE L1 4225 5586 -297 2 766 6714 77 65 0 chrX 23787823 23788746 -142861550 + L1Md_F2 LINE L1 5588 6570 -12 2 766 1398 214 54 96 chrX 23788746 23789136 -142861160 + RLTR21 LTR ERVK 706 1062 -510 2 766 648 0 0 0 chrX 23789136 23789208 -142861088 + (TA)n Simple_repeat Simple_repeat 2 73 0 2 766 1398 214 54 96 chrX 23789208 23789277 -142861019 + RLTR21 LTR ERVK 1063 1146 -426 2 766 2923 87 12 2 chrX 23789476 23789893 -142860403 - BGLII LTR ERVK 0 421 1 2 766 2725 203 113 8 chrX 23789893 23790815 -142859481 - MYSERV16_I-int LTR ERVK 0 2326 1308 2 766 533 221 40 33 chrX 23790837 23790987 -142859309 - RMER3D-int LTR ERVK -1164 1678 1528 2 766 1665 191 8 33 chrX 23791015 23791172 -142859124 - RMER3D-int LTR ERVK -1309 1533 1386 2 766 3372 35 2 0 chrX 23791172 23791567 -142858729 + MTA_Mm LTR MaLR 1 396 0 2 766 1665 195 10 30 chrX 23791567 23791890 -142858406 - RMER3D-int LTR ERVK -1457 1385 1014 2 766 599 116 33 60 chrX 23791935 23792118 -142858178 + CT-rich Low_complexity Low_complexity 3 180 0 2 766 492 229 27 32 chrX 23792189 23792525 -142857771 - RMER3D-int LTR ERVK -2038 804 354 2 766 561 223 25 40 chrX 23792611 23792812 -142857484 - RMER3D-int LTR ERVK -1993 849 652 2 766 477 132 3 0 chrX 23792827 23792915 -142857381 - RMER3D-int LTR ERVK -2278 564 489 2 766 1899 246 34 135 chrX 23793179 23794067 -142856229 - Lx7 LINE L1 -1042 6654 5857 2 766 382 96 0 27 chrX 23794078 23794153 -142856143 + (TA)n Simple_repeat Simple_repeat 1 73 0 2 766 667 266 51 6 chrX 23794399 23794577 -142855719 + B3A SINE B2 1 186 -12 2 766 420 111 0 0 chrX 23794672 23794735 -142855561 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 2 766 860 278 10 0 chrX 23794811 23795016 -142855280 - B3 SINE B2 -9 207 1 2 766 1066 260 84 0 chrX 23795436 23795732 -142854564 - MER2 DNA MER2_type -24 321 1 2 766 396 0 0 0 chrX 23795892 23795936 -142854360 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 766 812 150 71 16 chrX 23795946 23796129 -142854167 + L1_Mm LINE L1 5259 5451 -432 2 766 535 291 30 105 chrX 23796163 23796651 -142853645 + L1VL1 LINE L1 261 691 -5943 2 766 468 215 55 14 chrX 23796677 23796823 -142853473 + L1Md_F LINE L1 567 718 -5801 2 766 2101 208 11 0 chrX 23796820 23797296 -142853000 + L1Md_F LINE L1 628 1108 -5411 2 766 20355 183 10 48 chrX 23797302 23802273 -142848023 + L1VL1 LINE L1 1080 5824 -62 2 766 4377 166 46 4 chrX 23802276 23803400 -142846896 - Lx3C LINE L1 -458 6518 5354 2 766 10181 181 30 8 chrX 23803413 23806400 -142843896 + Lx4A LINE L1 3725 6779 -279 2 766 280 385 57 27 chrX 23806665 23806964 -142843332 - RMER1C Other Other -494 848 541 2 766 485 401 16 4 chrX 23807378 23807626 -142842670 - RMER1C Other Other -597 745 495 2 766 22 0 0 0 chrX 23807778 23807800 -142842496 + AT_rich Low_complexity Low_complexity 1 22 0 2 766 243 417 26 19 chrX 23807903 23808167 -142842129 - RMER1C Other Other -613 729 464 2 766 273 420 14 35 chrX 23808283 23808628 -142841668 - RMER1C Other Other -496 846 509 2 766 270 395 18 18 chrX 23809286 23809451 -142840845 - RMER1C Other Other -536 806 642 2 766 334 421 37 22 chrX 23810591 23811232 -142839064 - RMER1C Other Other -574 768 378 2 766 243 0 0 0 chrX 23811489 23811516 -142838780 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 766 226 328 36 29 chrX 23811644 23811782 -142838514 - RMER1C Other Other -753 589 451 2 766 470 391 33 17 chrX 23811903 23812449 -142837847 - RMER1C Other Other -468 874 375 2 766 231 61 0 0 chrX 23813592 23813625 -142836671 + (T)n Simple_repeat Simple_repeat 1 33 0 2 766 5340 128 15 25 chrX 23814757 23816304 -142833992 + L1Md_A LINE L1 233 1759 -4124 2 766 851 125 7 14 chrX 23816306 23816452 -142833844 - L1Md_F2 LINE L1 -10 6572 6428 2 766 732 11 0 0 chrX 23816556 23816643 -142833653 - L1Md_T LINE L1 -473 6109 6023 2 766 4155 13 0 8 chrX 23816643 23817114 -142833182 + L1Md_T LINE L1 6116 6582 0 2 766 257 300 60 74 chrX 23817359 23817643 -142832653 - RMER17C LTR ERVK -48 362 83 2 766 5328 137 10 14 chrX 23818076 23819004 -142831292 + Lx3B LINE L1 5997 6920 -53 2 766 226 331 36 29 chrX 23819843 23819983 -142830313 + L2 LINE L2 1519 1659 -1760 2 766 210 326 52 10 chrX 23820344 23820440 -142829856 + L2 LINE L2 1926 2025 -1394 2 766 604 314 40 15 chrX 23820454 23820661 -142829635 - B4A SINE B4 -2 290 83 2 766 261 98 0 0 chrX 23820702 23820743 -142829553 + (TGG)n Simple_repeat Simple_repeat 1 41 0 2 766 397 324 116 34 chrX 23820839 23821072 -142829224 + L2 LINE L2 2049 2300 -1119 2 766 4433 142 12 19 chrX 23821077 23821874 -142828422 + YREP_Mm Unknown Unknown 986 1777 -35 2 766 443 294 0 0 chrX 23822717 23822819 -142827477 + B3 SINE B2 100 201 -15 2 766 430 321 57 0 chrX 23822859 23822999 -142827297 + B1F SINE Alu 1 148 -1 2 766 1012 218 19 0 chrX 23823146 23823352 -142826944 + B3 SINE B2 2 211 -5 3 766 2614 56 9 3 chrX 23823377 23823702 -142826594 + IAPLTR2b LTR ERVK 1 327 0 3 766 621 324 89 26 chrX 23823914 23824183 -142826113 + B4A SINE B4 4 289 -3 3 766 4650 149 48 37 chrX 23824313 23826111 -142824185 + L1VL2 LINE L1 23 1682 -1933 3 766 2007 108 3 74 chrX 23826111 23826462 -142823834 + IAPLTR1a_Mm LTR ERVK 1 326 -11 3 766 21236 15 7 11 chrX 23826463 23829027 -142821269 + IAPEz-int LTR ERVK 1 2555 -3926 3 766 30710 12 3 2 chrX 23829017 23832614 -142817682 + IAPEz-int LTR ERVK 2881 6481 0 3 766 2841 39 0 3 chrX 23832614 23832952 -142817344 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 766 2578 37 3 3 chrX 23832952 23833252 -142817044 + IAPEz-int LTR ERVK 6182 6481 0 3 766 2061 109 3 73 chrX 23833252 23833609 -142816687 + IAPLTR1a_Mm LTR ERVK 1 332 -5 3 766 12036 171 15 60 chrX 23833611 23834516 -142815780 + L1_Mm LINE L1 1975 2796 -3087 3 766 1037 90 0 0 chrX 23834516 23834650 -142815646 + B1_Mus2 SINE Alu 1 134 -13 3 766 12036 171 15 60 chrX 23834650 23836656 -142813640 + L1_Mm LINE L1 2797 4756 -1127 3 766 5185 145 19 1 chrX 23836657 23837508 -142812788 + Lx LINE L1 5787 6652 -2 3 766 21 82 0 0 chrX 23837596 23837645 -142812651 + AT_rich Low_complexity Low_complexity 1 49 0 3 766 21 95 0 0 chrX 23838536 23838599 -142811697 + AT_rich Low_complexity Low_complexity 1 63 0 3 766 318 50 0 0 chrX 23838661 23838701 -142811595 + (TC)n Simple_repeat Simple_repeat 2 41 0 3 766 309 68 0 0 chrX 23838702 23838746 -142811550 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 766 260 286 134 60 chrX 23839049 23839183 -142811113 + B1F SINE Alu 4 147 -2 3 766 224 333 47 70 chrX 23839178 23839198 -142811098 + ID_B1 SINE B4 70 195 -29 3 766 257 283 101 28 chrX 23839198 23839307 -142810989 + B1F SINE Alu 1 117 -32 3 766 859 291 14 24 chrX 23840091 23840302 -142809994 - B3 SINE B2 -6 210 2 3 766 1058 97 7 0 chrX 23840556 23840701 -142809595 - B1_Mus1 SINE Alu -1 147 2 3 766 357 254 162 10 chrX 23840701 23840899 -142809397 - B4A SINE B4 -63 229 2 3 766 180 0 0 0 chrX 23841152 23841172 -142809124 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 766 227 283 0 0 chrX 23841342 23841388 -142808908 + B3 SINE B2 115 160 -56 3 766 28 0 0 0 chrX 23841531 23841559 -142808737 + AT_rich Low_complexity Low_complexity 1 28 0 3 766 325 322 49 8 chrX 23841807 23841929 -142808367 - B1F SINE Alu -3 146 20 3 766 12699 122 10 6 chrX 23842180 23844356 -142805940 + MusHAL1 LINE L1 243 2427 -285 3 766 402 239 0 0 chrX 23844360 23844448 -142805848 + L1M4 LINE L1 3658 3745 -2401 3 766 3813 137 1 100 chrX 23844463 23845374 -142804922 - L1Md_F LINE L1 -5313 1247 422 3 766 6399 95 8 7 chrX 23845375 23846305 -142803991 - L1Md_F LINE L1 -5494 1025 95 3 766 2992 156 6 40 chrX 23846369 23846462 -142803834 + MMETn-int LTR ERVK 2473 2542 -2302 3 766 4842 53 3 7 chrX 23846462 23847069 -142803227 + L1Md_F2 LINE L1 5966 6570 -12 3 766 2992 159 11 79 chrX 23847069 23847081 -142803215 + MMETn-int LTR ERVK 2543 2544 -2300 3 766 262 0 53 0 chrX 23847081 23847119 -142803177 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 3 766 2992 178 15 57 chrX 23847119 23848033 -142802263 + MMETn-int LTR ERVK 2545 3719 -1125 3 766 704 203 0 0 chrX 23848028 23848151 -142802145 + MMETn-int LTR ERVK 6539 6661 -745 3 766 3128 208 44 16 chrX 23848182 23848926 -142801370 - RLTR14-int LTR ERV1 -2117 3200 2436 3 766 1988 246 47 115 chrX 23850380 23851169 -142799127 + RLTR40 LTR ERVK 22 752 -65 3 766 6161 95 25 8 chrX 23851169 23852047 -142798249 - RLTR13B1 LTR ERVK 0 893 1 3 766 1988 246 47 115 chrX 23852047 23852102 -142798194 + RLTR40 LTR ERVK 753 809 -8 3 766 450 0 0 0 chrX 23852299 23852349 -142797947 + (TAA)n Simple_repeat Simple_repeat 2 51 0 3 766 627 243 58 11 chrX 23853893 23854084 -142796212 - Lx9 LINE L1 -243 7401 7202 3 766 417 179 0 0 chrX 23854085 23854169 -142796127 + Lx9 LINE L1 7554 7637 -7 3 766 464 300 13 0 chrX 23854178 23854328 -142795968 + Lx5 LINE L1 6825 6976 -74 3 766 180 77 0 0 chrX 23854347 23854373 -142795923 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 3 766 535 264 21 0 chrX 23854385 23854529 -142795767 + B1_Mus2 SINE Alu 1 147 0 3 766 1876 166 27 0 chrX 23854559 23854897 -142795399 + L1_Mus3 LINE L1 6284 6630 -8 3 766 28 48 0 0 chrX 23854909 23854951 -142795345 + AT_rich Low_complexity Low_complexity 1 42 0 3 95 718 240 19 28 chrX 23855080 23855294 -142795002 + Lx4B LINE L1 6809 7020 -38 3 767 2654 187 31 3 chrX 23855317 23855923 -142794373 - L1_Mur2 LINE L1 -1163 4714 4092 3 767 10028 139 41 24 chrX 23855924 23857291 -142793005 - RLTR22_Mur LTR ERVK -1 1847 461 3 767 397 71 0 28 chrX 23857291 23857363 -142792933 + (TAG)n Simple_repeat Simple_repeat 3 72 0 3 767 10028 139 41 24 chrX 23857363 23857810 -142792486 - RLTR22_Mur LTR ERVK -1388 460 3 3 767 1100 205 21 14 chrX 23857810 23858097 -142792199 - L1_Mur2 LINE L1 -1782 4095 3807 3 767 1280 142 25 4 chrX 23858141 23858382 -142791914 + L1_Mus4 LINE L1 6391 6636 0 3 767 180 0 0 0 chrX 23858875 23858895 -142791401 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 3 767 24 0 0 0 chrX 23860287 23860311 -142789985 + AT_rich Low_complexity Low_complexity 1 24 0 3 767 352 261 22 7 chrX 23860596 23860731 -142789565 + L1_Mur2 LINE L1 4334 4470 -1407 3 767 851 315 39 30 chrX 23860736 23861174 -142789122 + Lx6 LINE L1 6506 7296 -164 3 767 1503 184 20 88 chrX 23861151 23861603 -142788693 - L1_Mur2 LINE L1 -2136 3741 3321 3 767 1196 70 0 0 chrX 23861606 23861764 -142788532 - L1_Mus1 LINE L1 0 6567 6410 3 767 20254 107 5 16 chrX 23861764 23862973 -142787323 - L1_Mus1 LINE L1 -431 6136 4981 3 767 2865 63 58 112 chrX 23862973 23863473 -142786823 + IAPLTR2_Mm LTR ERVK 3 475 0 3 767 20254 133 8 29 chrX 23863473 23865347 -142784949 - L1_Mus1 LINE L1 -903 4980 3134 3 767 222 37 0 0 chrX 23865347 23865374 -142784922 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 767 20254 133 8 29 chrX 23865374 23866216 -142784080 - L1_Mus1 LINE L1 -2750 3133 2288 3 767 1181 208 56 4 chrX 23866212 23866463 -142783833 + L1VL1 LINE L1 3 266 -6156 3 767 28873 112 17 10 chrX 23866463 23869618 -142780678 + L1Md_F2 LINE L1 277 3462 -2421 3 767 1257 78 56 0 chrX 23869618 23869798 -142780498 + B2_Mm2 SINE B2 4 193 -2 3 767 28873 93 5 5 chrX 23869798 23871928 -142778368 + L1Md_F2 LINE L1 3463 5585 -298 3 767 7893 49 2 2 chrX 23871929 23872911 -142777385 + L1Md_F2 LINE L1 5587 6568 -14 3 767 2520 205 50 57 chrX 23872912 23873862 -142776434 - ETnERV2-int LTR ERVK -4308 3098 2496 3 767 1349 264 113 6 chrX 23874070 23874536 -142775760 + MuRRS4-int LTR ERV1 929 1444 -3619 3 767 3652 190 67 72 chrX 23874529 23874597 -142775699 + MuRRS4-int LTR ERV1 1123 1171 -2128 3 767 843 102 0 0 chrX 23874597 23874734 -142775562 + (GA)n Simple_repeat Simple_repeat 1 137 0 3 767 4718 171 40 32 chrX 23874734 23876951 -142773345 + MuRRS4-int LTR ERV1 1172 4271 -792 3 767 663 179 0 7 chrX 23876956 23877091 -142773205 + MuRRS4-int LTR ERV1 4802 4935 -128 3 767 949 274 7 10 chrX 23877091 23877401 -142772895 + MuRRS4-int LTR ERV1 4637 4945 -118 3 767 2881 337 32 36 chrX 23877984 23879581 -142770715 + RodERV21-int LTR ERV1 2912 4498 -493 3 767 2632 106 35 56 chrX 23879581 23880010 -142770286 + RLTR9B2 LTR ERVK 1 420 0 3 767 2881 337 32 36 chrX 23880010 23880302 -142769994 + RodERV21-int LTR ERV1 4499 4793 -198 3 767 232 333 61 68 chrX 23880358 23880490 -142769806 + RMER4B LTR ERVK 347 477 -108 3 767 828 159 13 46 chrX 23880745 23880897 -142769399 + B1_Mus1 SINE Alu 2 148 0 3 767 1112 266 48 65 chrX 23880980 23881839 -142768457 + L1VL1 LINE L1 205 1040 -5684 3 767 30755 61 2 0 chrX 23881837 23886051 -142764245 + L1Md_F3 LINE L1 1367 5586 -297 3 767 7728 64 7 0 chrX 23886052 23887042 -142763254 + L1Md_F3 LINE L1 5588 6584 0 3 767 264 395 22 39 chrX 23887106 23887646 -142762650 - RMER1C Other Other -473 869 375 3 767 285 145 0 0 chrX 23888888 23888950 -142761346 + (T)n Simple_repeat Simple_repeat 1 62 0 3 767 245 448 0 0 chrX 23889370 23889600 -142760696 - RMER1C Other Other -701 641 412 3 767 298 391 6 0 chrX 23889703 23889859 -142760437 - RMER1C Other Other -685 657 501 3 767 225 442 0 0 chrX 23890147 23890285 -142760011 - RMER1C Other Other -670 672 535 3 767 466 256 8 23 chrX 23890683 23890815 -142759481 - Lx8 LINE L1 -704 6769 6640 3 767 999 281 47 22 chrX 23890970 23891330 -142758966 - ORR1D2 LTR MaLR -1 369 1 3 767 411 400 0 0 chrX 23891444 23891679 -142758617 - Lx8 LINE L1 -283 7190 6956 3 767 654 321 46 14 chrX 23891681 23891899 -142758397 + ORR1D2 LTR MaLR 1 225 -145 3 767 613 214 18 88 chrX 23891905 23892131 -142758165 + Lx6 LINE L1 2265 2474 -3403 3 767 1112 219 40 12 chrX 23892135 23892463 -142757833 + Lx6 LINE L1 3508 3844 -2033 3 767 2718 248 21 12 chrX 23892468 23893459 -142756837 + Lx6 LINE L1 5105 6108 -1352 3 767 232 228 35 0 chrX 23893522 23893579 -142756717 - B4 SINE B4 -232 60 2 3 767 369 284 71 47 chrX 23893826 23893996 -142756300 - RLTR1B LTR ERV1 -173 339 166 3 767 13744 166 13 7 chrX 23893998 23896785 -142753511 - L1_Mm LINE L1 -1634 4249 1445 3 767 315 322 49 8 chrX 23897036 23897158 -142753138 + B1F SINE Alu 20 146 -3 3 767 232 346 0 0 chrX 23897447 23897499 -142752797 - ID4 SINE ID -28 55 4 3 767 217 310 127 0 chrX 23897732 23897803 -142752493 + ID4 SINE ID 4 83 0 3 767 372 256 160 10 chrX 23898073 23898273 -142752023 + B4 SINE B4 1 230 -62 3 767 964 126 7 0 chrX 23898274 23898417 -142751879 + B1_Mus1 SINE Alu 4 147 -1 3 767 794 294 39 24 chrX 23898672 23898878 -142751418 + B3 SINE B2 2 210 -6 3 767 247 276 76 24 chrX 23899665 23899770 -142750526 - B1F SINE Alu -36 113 1 3 767 214 324 35 79 chrX 23899676 23899790 -142750506 - ID_B1 SINE B4 -46 178 70 3 767 281 278 134 60 chrX 23899785 23899919 -142750377 - B1F SINE Alu -2 147 4 3 767 24 0 0 0 chrX 23899919 23899943 -142750353 + AT_rich Low_complexity Low_complexity 1 24 0 3 767 432 0 0 0 chrX 23900223 23900271 -142750025 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 767 417 81 0 0 chrX 23900273 23900335 -142749961 + (GA)n Simple_repeat Simple_repeat 2 63 0 3 767 24 0 0 0 chrX 23900649 23900673 -142749623 + AT_rich Low_complexity Low_complexity 1 24 0 3 767 21 82 0 0 chrX 23901494 23901543 -142748753 + AT_rich Low_complexity Low_complexity 1 49 0 3 767 5249 141 19 1 chrX 23901633 23902484 -142747812 - Lx LINE L1 -2 6652 5787 3 767 16036 161 19 49 chrX 23902485 23904490 -142745806 - L1VL2 LINE L1 -1127 4756 2797 3 767 1007 97 0 0 chrX 23904490 23904624 -142745672 - B1_Mus2 SINE Alu -13 134 1 3 767 16036 173 33 57 chrX 23904624 23907324 -142742972 - L1VL2 LINE L1 -3087 2796 300 3 767 579 323 95 30 chrX 23907454 23907716 -142742580 - B4A SINE B4 -3 289 11 3 767 1040 214 19 0 chrX 23907952 23908158 -142742138 - B3 SINE B2 -5 211 2 3 767 430 267 67 0 chrX 23908305 23908425 -142741871 - B1F SINE Alu -1 148 21 3 767 441 308 0 0 chrX 23908485 23908589 -142741707 - B3 SINE B2 -15 201 98 3 767 4481 132 15 19 chrX 23909425 23910220 -142740076 - YREP_Mm Unknown Unknown -35 1777 986 4 767 281 313 164 74 chrX 23910225 23910456 -142739840 - L2 LINE L2 -1119 2300 2049 4 767 282 73 0 0 chrX 23910552 23910593 -142739703 + (CCA)n Simple_repeat Simple_repeat 1 41 0 4 767 569 313 40 7 chrX 23910686 23910834 -142739462 + B4A SINE B4 131 283 -9 4 767 213 324 43 35 chrX 23911314 23911455 -142738841 - L2 LINE L2 -1760 1659 1518 4 767 5728 132 7 36 chrX 23912793 23913768 -142736528 - Lx3A LINE L1 -7 6974 6028 4 767 306 303 56 70 chrX 23914231 23914515 -142735781 + RMER17C LTR ERVK 83 362 -48 4 767 917 99 7 14 chrX 23914796 23914940 -142735356 + L1Md_F2 LINE L1 6428 6570 -12 4 767 1774 48 0 0 chrX 23914950 23915198 -142735098 - L1_Mm LINE L1 -4124 1759 1512 4 767 1513 198 8 28 chrX 23915204 23915410 -142734886 + RMER3D-int LTR ERVK 1177 1383 -1459 4 767 3190 58 2 0 chrX 23915410 23915805 -142734491 - MTA_Mm LTR MaLR 0 396 1 4 767 1513 198 8 28 chrX 23915805 23915962 -142734334 + RMER3D-int LTR ERVK 1384 1533 -1309 4 767 565 194 47 40 chrX 23915990 23916140 -142734156 + RMER3D-int LTR ERVK 1528 1678 -1164 4 767 2813 200 112 9 chrX 23916163 23917087 -142733209 + MYSERV16_I-int LTR ERVK 1308 2326 0 4 767 2891 103 5 2 chrX 23917087 23917507 -142732789 + BGLII LTR ERVK 1 421 0 4 767 1316 207 67 38 chrX 23917745 23918174 -142732122 - RLTR21 LTR ERVK -150 1254 706 4 767 18564 101 202 12 chrX 23918174 23923273 -142727023 - L1Md_F2 LINE L1 -12 6570 446 4 767 787 155 17 51 chrX 23923276 23923453 -142726843 - RLTR21 LTR ERVK -855 717 547 4 767 243 0 0 0 chrX 23923461 23923488 -142726808 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 767 1440 221 21 42 chrX 23923505 23923836 -142726460 - RLTR21 LTR ERVK -1248 324 1 4 767 1460 272 25 26 chrX 23924345 23924577 -142725719 - Lx6 LINE L1 -1326 6134 5904 4 767 1979 205 17 14 chrX 23924577 23924997 -142725299 - MTC LTR MaLR 0 421 1 4 767 1460 272 25 26 chrX 23924997 23925293 -142725003 - Lx6 LINE L1 -1557 5903 5607 4 767 1018 210 28 7 chrX 23925300 23925583 -142724713 - L1_Mur3 LINE L1 -2593 3287 2999 4 767 3463 164 20 21 chrX 23925584 23926115 -142724181 - L1_Mus3 LINE L1 -7 6631 6097 4 767 2640 73 0 3 chrX 23926115 23926458 -142723838 - ORR1A1 LTR MaLR -4 342 1 4 767 3463 164 20 21 chrX 23926458 23926581 -142723715 - L1_Mus3 LINE L1 -542 6096 5978 4 767 2183 89 3 3 chrX 23926581 23926895 -142723401 + L1Md_F2 LINE L1 5273 5586 -297 4 767 7299 75 3 14 chrX 23926896 23927900 -142722396 + L1Md_F2 LINE L1 5588 6580 -2 4 767 1120 304 42 48 chrX 23927912 23928454 -142721842 - RodERV21-int LTR ERV1 -3339 1652 1114 4 767 234 152 49 33 chrX 23929770 23929831 -142720465 + GA-rich Low_complexity Low_complexity 2 63 0 4 767 302 266 56 21 chrX 23929987 23930129 -142720167 - L1_Rod LINE L1 -305 5542 5396 4 767 2185 216 66 38 chrX 23930148 23930706 -142719590 + RLTR31A_Mm LTR ERVK 11 584 0 4 767 854 152 7 46 chrX 23930954 23931106 -142719190 - B1_Mus2 SINE Alu 0 147 2 4 767 2951 329 37 42 chrX 23931550 23931841 -142718455 - RodERV21-int LTR ERV1 -198 4793 4497 4 767 2487 119 37 56 chrX 23931841 23932269 -142718027 - RLTR9B2 LTR ERVK 0 420 1 4 767 2951 329 37 42 chrX 23932269 23933875 -142716421 - RodERV21-int LTR ERV1 -495 4496 2905 4 767 1058 268 3 7 chrX 23934445 23934746 -142715550 - MuRRS4-int LTR ERV1 -128 4935 4636 4 767 711 182 0 7 chrX 23934737 23934881 -142715415 - MuRRS4-int LTR ERV1 -119 4944 4802 4 767 5006 156 42 36 chrX 23934882 23937189 -142713107 - MuRRS4-int LTR ERV1 -2331 5225 1116 4 767 1284 254 63 10 chrX 23937219 23937632 -142712664 - MuRRS4-int LTR ERV1 -3617 1446 1012 4 767 565 283 16 74 chrX 23937781 23938037 -142712259 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 4 767 516 179 92 17 chrX 23938037 23938156 -142712140 - MuRRS4-int LTR ERV1 -4186 877 750 4 767 361 185 10 98 chrX 23938142 23938244 -142712052 - RMER16-int LTR ERVK -3960 1446 1354 4 767 4018 131 28 9 chrX 23938345 23939029 -142711267 - RMER16-int LTR ERVK -4045 1361 665 4 767 187 244 22 0 chrX 23939029 23939074 -142711222 + MIR SINE MIR 31 76 -132 4 767 809 272 24 6 chrX 23939078 23939370 -142710926 - MuRRS4-int LTR ERV1 -6926 852 374 4 767 604 244 51 79 chrX 23939704 23940255 -142710041 - MuRRS4-int LTR ERV1 -4565 498 5 4 767 664 266 93 40 chrX 23940257 23940535 -142709761 - LTRIS4 LTR ERV1 0 507 215 4 767 367 346 9 34 chrX 23941448 23941774 -142708522 - RodERV21-int LTR ERV1 -3188 3903 3586 4 767 1160 285 19 49 chrX 23941899 23942327 -142707969 - RodERV21-int LTR ERV1 -2273 2718 2304 4 767 4183 106 29 5 chrX 23942332 23942996 -142707300 - L1_Mus3 LINE L1 -247 6391 5712 4 767 1394 138 4 0 chrX 23942998 23943223 -142707073 + L1_Mus3 LINE L1 5473 5698 -185 4 767 1645 196 12 21 chrX 23943223 23943551 -142706745 - RLTR14 LTR ERV1 -51 331 7 4 767 455 194 0 11 chrX 23943576 23943670 -142706626 - RLTR14-int LTR ERV1 -5 5312 5220 4 767 2775 194 88 6 chrX 23943693 23944348 -142705948 - RLTR14-int LTR ERV1 -205 5112 4404 4 767 1051 119 0 6 chrX 23944382 23944543 -142705753 - L1_Mus3 LINE L1 -211 5672 5513 4 767 793 147 12 58 chrX 23944551 23944724 -142705572 + MMETn-int LTR ERVK 2026 2190 -2654 4 767 3630 126 48 3 chrX 23944946 23945566 -142704730 + ETnERV2-int LTR ERVK 3438 4085 -3321 4 767 674 204 114 19 chrX 23945543 23945873 -142704423 + ETnERV2-int LTR ERVK 4585 4945 -2299 4 767 18863 78 3 6 chrX 23945896 23949341 -142700955 - L1Md_F2 LINE L1 -12 6570 3137 4 767 7167 89 1 15 chrX 23949334 23950841 -142699455 - L1Md_F2 LINE L1 -4208 1675 192 4 767 690 249 33 134 chrX 23950905 23950998 -142699298 + ETnERV2-int LTR ERVK 5040 5120 -2124 4 767 4667 66 2 5 chrX 23950998 23951603 -142698693 + L1Md_F2 LINE L1 5966 6568 -14 4 767 3030 178 18 41 chrX 23951603 23952539 -142697757 + ETnERV2-int LTR ERVK 2541 3719 -1125 4 767 750 187 0 0 chrX 23952534 23952657 -142697639 + ETnERV2-int LTR ERVK 6539 6661 -745 4 767 3163 203 43 24 chrX 23952688 23952815 -142697481 - RLTR14-int LTR ERV1 -2117 3200 3078 4 767 4175 59 2 8 chrX 23952815 23953330 -142696966 + LTRIS3 LTR ERV1 1 512 0 4 767 3163 203 43 24 chrX 23953330 23953953 -142696343 - RLTR14-int LTR ERV1 -2240 3077 2436 4 767 1993 242 129 45 chrX 23955392 23955905 -142694391 + RLTR40 LTR ERVK 20 552 -265 4 767 833 89 8 0 chrX 23955905 23956029 -142694267 + (GA)n Simple_repeat Simple_repeat 2 126 0 4 767 1993 242 129 45 chrX 23956029 23956188 -142694108 + RLTR40 LTR ERVK 553 751 -66 4 767 6206 91 26 5 chrX 23956188 23957062 -142693234 - RLTR13B1 LTR ERVK 0 893 1 4 767 1993 242 129 45 chrX 23957062 23957124 -142693172 + RLTR40 LTR ERVK 752 816 -1 4 767 189 0 0 0 chrX 23957315 23957336 -142692960 + (TAA)n Simple_repeat Simple_repeat 2 22 0 4 767 474 18 0 0 chrX 23957336 23957391 -142692905 + (GAA)n Simple_repeat Simple_repeat 2 56 0 4 767 667 232 57 10 chrX 23958941 23959133 -142691163 - Lx9 LINE L1 -243 7401 7201 4 767 359 214 0 0 chrX 23959133 23959217 -142691079 + Lx9 LINE L1 7554 7637 -7 4 767 471 293 13 0 chrX 23959226 23959376 -142690920 + Lx5 LINE L1 6825 6976 -74 4 767 207 0 0 0 chrX 23959384 23959407 -142690889 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 4 767 687 240 7 0 chrX 23959422 23959568 -142690728 + B1_Mus2 SINE Alu 1 147 0 4 767 2005 134 36 0 chrX 23959599 23959934 -142690362 + L1_Mus3 LINE L1 6284 6630 -8 4 767 31 26 0 0 chrX 23959946 23959984 -142690312 + AT_rich Low_complexity Low_complexity 1 38 0 4 767 227 263 0 0 chrX 23960050 23960107 -142690189 + A-rich Low_complexity Low_complexity 4 60 0 4 767 751 246 19 14 chrX 23960116 23960330 -142689966 + Lx4B LINE L1 6809 7023 -35 4 767 1320 175 35 0 chrX 23960366 23960652 -142689644 - L1_Mur2 LINE L1 -1176 4701 4406 4 767 2204 84 42 0 chrX 23960649 23960983 -142689313 - L1Md_A LINE L1 -6162 562 215 4 767 4559 92 6 5 chrX 23960983 23961626 -142688670 + L1_Mus1 LINE L1 5924 6567 0 4 767 4117 175 19 5 chrX 23961636 23962442 -142687854 + Lx2 LINE L1 5827 6643 -354 4 767 1214 176 5 0 chrX 23962442 23962658 -142687638 + Lx2 LINE L1 6775 6991 -6 4 767 387 245 39 10 chrX 23962950 23963053 -142687243 - ID_B1 SINE B4 -2 222 117 4 767 5925 180 38 9 chrX 23963053 23964577 -142685719 - Lx3C LINE L1 -57 6919 5354 4 767 9619 184 31 14 chrX 23964590 23967584 -142682712 + Lx4A LINE L1 3725 6779 -279 4 767 332 396 44 26 chrX 23967849 23968455 -142681841 - RMER1C Other Other -458 884 374 4 767 448 415 13 10 chrX 23968563 23968872 -142681424 - RMER1C Other Other -523 819 510 4 767 23 0 0 0 chrX 23968964 23968987 -142681309 + AT_rich Low_complexity Low_complexity 1 23 0 4 767 302 405 29 22 chrX 23969080 23969355 -142680941 - RMER1C Other Other -602 740 464 4 767 236 451 4 8 chrX 23969577 23969816 -142680480 - RMER1C Other Other -559 783 546 4 767 282 382 39 13 chrX 23971471 23971625 -142678671 - RMER1C Other Other -766 576 419 4 767 362 422 32 21 chrX 23971782 23972428 -142677868 - RMER1C Other Other -509 833 412 4 767 406 406 16 33 chrX 23973165 23973593 -142676703 - RMER1C Other Other -475 867 447 4 767 3326 167 9 3 chrX 23976183 23976830 -142673466 + L1Md_A LINE L1 441 1091 -5633 4 767 2547 94 0 2 chrX 23976828 23977223 -142673073 + L1Md_A LINE L1 1977 2370 -3513 4 767 19559 73 0 3 chrX 23977234 23979978 -142670318 + L1Md_A LINE L1 2850 5586 -297 4 767 7763 61 2 0 chrX 23979978 23980960 -142669336 + L1Md_F2 LINE L1 5587 6570 -12 4 767 3748 81 0 0 chrX 23980963 23981799 -142668497 + L1Md_Gf LINE L1 830 1762 -4124 4 767 806 127 35 21 chrX 23981803 23981948 -142668348 - L1_Mus1 LINE L1 0 6567 6421 4 767 284 328 53 67 chrX 23982228 23982512 -142667784 - RMER17C LTR ERVK -48 362 83 4 767 5742 132 9 29 chrX 23982975 23983941 -142666355 + Lx3A LINE L1 6028 6974 -7 4 767 207 333 62 37 chrX 23985256 23985418 -142664878 + L2 LINE L2 1494 1659 -1760 4 767 531 339 40 15 chrX 23985891 23986098 -142664198 - B4A SINE B4 -2 290 83 4 95 261 57 0 0 chrX 23986144 23986179 -142664117 + (TGG)n Simple_repeat Simple_repeat 1 35 0 4 768 346 341 111 34 chrX 23986275 23986509 -142663787 + L2 LINE L2 2049 2300 -1119 4 768 4538 134 14 19 chrX 23986514 23987310 -142662986 + YREP_Mm Unknown Unknown 986 1777 -35 4 768 449 335 62 19 chrX 23988099 23988260 -142662036 + B3 SINE B2 34 201 -15 4 768 364 261 75 8 chrX 23988320 23988440 -142661856 + B1F SINE Alu 21 148 -1 4 768 968 227 19 0 chrX 23988586 23988793 -142661503 + B3 SINE B2 1 211 -5 4 768 660 327 84 26 chrX 23989024 23989297 -142660999 + B4A SINE B4 4 292 0 4 768 22 56 0 0 chrX 23989302 23989338 -142660958 + AT_rich Low_complexity Low_complexity 1 36 0 4 768 15662 177 34 58 chrX 23989421 23992101 -142658195 + L1VL2 LINE L1 321 2807 -3076 4 768 980 119 0 0 chrX 23992101 23992235 -142658061 + B1_Mus2 SINE Alu 1 134 -13 4 768 15662 163 19 55 chrX 23992235 23994282 -142656014 + L1VL2 LINE L1 2808 4756 -1127 4 768 5175 145 19 2 chrX 23994283 23995135 -142655161 + Lx LINE L1 5787 6652 -2 4 768 21 0 0 0 chrX 23995135 23995156 -142655140 + AT_rich Low_complexity Low_complexity 1 21 0 4 768 26 88 0 0 chrX 23995199 23995267 -142655029 + AT_rich Low_complexity Low_complexity 1 68 0 4 768 764 305 29 10 chrX 23996763 23996968 -142653328 - B3 SINE B2 -6 210 2 4 768 933 132 0 20 chrX 23997220 23997367 -142652929 - B1_Mus1 SINE Alu -1 147 4 4 768 290 213 39 26 chrX 23997368 23997445 -142652851 - B4A SINE B4 -62 230 153 4 768 372 301 0 0 chrX 23997474 23997567 -142652729 - B4 SINE B4 -199 93 1 4 768 294 50 0 0 chrX 23997825 23997865 -142652431 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 4 768 21 36 0 0 chrX 23998226 23998254 -142652042 + AT_rich Low_complexity Low_complexity 1 28 0 4 768 325 322 49 8 chrX 23998502 23998624 -142651672 - B1F SINE Alu -3 146 20 4 768 6631 110 12 1 chrX 23998851 23999880 -142650416 + L1_Mus3 LINE L1 5595 6634 -4 4 768 201 121 0 0 chrX 24000311 24000344 -142649952 + (A)n Simple_repeat Simple_repeat 1 33 0 1 768 336 169 0 0 chrX 24000517 24000567 -142649729 + (TATATG)n Simple_repeat Simple_repeat 4 53 0 2 768 312 27 0 0 chrX 24000567 24000604 -142649692 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 768 336 169 0 0 chrX 24000604 24000618 -142649678 + (TATATG)n Simple_repeat Simple_repeat 2 15 0 4 768 284 281 24 35 chrX 24001187 24001272 -142649024 + B4A SINE B4 82 165 -127 5 768 232 364 22 11 chrX 24002196 24002285 -142648011 - B3 SINE B2 -14 202 113 6 768 225 278 0 65 chrX 24002289 24002366 -142647930 - B4A SINE B4 -139 153 82 7 768 410 300 70 14 chrX 24002372 24002514 -142647782 - B3 SINE B2 -64 152 3 8 768 333 0 0 0 chrX 24002598 24002635 -142647661 + (CA)n Simple_repeat Simple_repeat 2 38 0 9 768 6960 104 24 9 chrX 24002755 24004532 -142645764 - L1_Mus1 LINE L1 0 6567 4778 1 768 7378 77 8 7 chrX 24004513 24005693 -142644603 - L1Md_F2 LINE L1 0 6582 5405 1 768 17859 156 11 15 chrX 24005691 24009022 -142641274 - L1_Mus1 LINE L1 -1075 4808 1492 1 768 6766 158 27 9 chrX 24009020 24010348 -142639948 - L1_Mus3 LINE L1 -690 5948 4601 1 768 638 189 9 0 chrX 24010347 24010458 -142639838 - Lx4A LINE L1 -228 6830 6719 1 768 2172 258 67 13 chrX 24011319 24011931 -142638365 - Lx2B LINE L1 -14 6986 6342 1 768 3191 163 34 10 chrX 24011928 24012086 -142638210 + Lx6 LINE L1 4537 4710 -1167 1 768 225 0 0 0 chrX 24012086 24012111 -142638185 + (TTA)n Simple_repeat Simple_repeat 1 25 0 1 768 3191 163 34 10 chrX 24012111 24012579 -142637717 + Lx6 LINE L1 4711 5177 -700 1 768 501 167 0 44 chrX 24012752 24012865 -142637431 - URR1B DNA MER1_type 0 225 118 1 768 327 311 59 35 chrX 24013196 24013366 -142636930 + RLTR1B LTR ERV1 166 339 -173 1 768 1827 237 8 17 chrX 24013675 24014274 -142636022 - Lx6 LINE L1 -1352 6108 5512 1 768 8366 33 1 0 chrX 24014273 24015580 -142634716 - L1Md_T LINE L1 -1 6581 5273 2 768 3645 150 20 23 chrX 24015580 24015704 -142634592 + L1_Mus3 LINE L1 5978 6100 -538 2 768 2590 82 0 3 chrX 24015704 24016047 -142634249 + ORR1A1 LTR MaLR 1 342 -4 2 768 3645 150 20 23 chrX 24016047 24016577 -142633719 + L1_Mus3 LINE L1 6101 6630 -8 2 768 1057 210 28 3 chrX 24016578 24016860 -142633436 + L1_Mur3 LINE L1 2999 3287 -2593 2 768 1612 273 21 26 chrX 24016867 24017163 -142633133 + Lx6 LINE L1 5607 5903 -1557 1 768 1976 205 17 14 chrX 24017163 24017583 -142632713 + MTC LTR MaLR 1 421 0 2 768 1612 273 21 26 chrX 24017583 24017817 -142632479 + Lx6 LINE L1 5904 6134 -1326 1 768 238 283 46 19 chrX 24017820 24017928 -142632368 + Lx6 LINE L1 7335 7445 -15 1 768 2677 63 23 6 chrX 24018084 24018437 -142631859 + L1Md_F2 LINE L1 6214 6572 -10 2 768 1334 204 74 42 chrX 24018438 24018865 -142631431 + RLTR21 LTR ERVK 711 1254 -150 2 768 2896 96 7 2 chrX 24019103 24019521 -142630775 - BGLII LTR ERVK 0 421 2 2 768 2885 213 44 54 chrX 24019523 24020447 -142629849 - RMER3D-int LTR ERVK -1 2841 1927 2 768 2219 205 88 79 chrX 24020469 24020804 -142629492 - RMER3D-int LTR ERVK -1164 1678 1386 2 768 3072 49 26 3 chrX 24020804 24021191 -142629105 + MTA_Mm LTR MaLR 1 396 0 2 768 2219 205 88 79 chrX 24021191 24021512 -142628784 - RMER3D-int LTR ERVK -1457 1385 1016 2 768 527 73 75 56 chrX 24021558 24021718 -142628578 + CT-rich Low_complexity Low_complexity 3 165 0 2 768 641 254 66 41 chrX 24021773 24022348 -142627948 - RMER3D-int LTR ERVK -1993 849 331 2 768 456 140 0 0 chrX 24022363 24022451 -142627845 - RMER3D-int LTR ERVK -2278 564 489 3 768 1990 265 47 17 chrX 24022715 24023292 -142627004 - Lx7 LINE L1 -1042 6654 6061 3 768 727 255 51 29 chrX 24023328 24023603 -142626693 - Lx7 LINE L1 -1559 6137 5857 3 768 645 282 51 6 chrX 24023899 24024077 -142626219 + B3A SINE B2 1 186 -12 3 768 339 25 0 0 chrX 24024168 24024208 -142626088 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 3 768 856 289 0 0 chrX 24024293 24024497 -142625799 - B3 SINE B2 -12 204 1 3 768 971 278 107 0 chrX 24024904 24025213 -142625083 - MER2 DNA MER2_type -3 342 1 3 768 825 189 62 14 chrX 24025377 24025586 -142624710 + L1_Mm LINE L1 5235 5453 -430 3 768 2046 233 19 116 chrX 24025621 24026731 -142623565 + L1_Mus1 LINE L1 264 1209 -5425 3 768 17290 191 11 59 chrX 24026723 24032548 -142617748 + L1_Mus1 LINE L1 1071 6567 0 3 768 4478 181 18 2 chrX 24032556 24033374 -142616922 + Lx2 LINE L1 5813 6643 -354 3 768 1252 162 5 0 chrX 24033374 24033590 -142616706 + Lx2 LINE L1 6775 6991 -6 3 768 336 227 0 13 chrX 24033882 24033958 -142616338 - ID_B1 SINE B4 -2 222 148 3 768 510 17 0 0 chrX 24033961 24034020 -142616276 + (TA)n Simple_repeat Simple_repeat 2 60 0 4 768 270 265 80 20 chrX 24034020 24034040 -142616256 - B1F SINE Alu -85 64 42 4 768 6457 181 30 8 chrX 24034042 24035591 -142614705 - Lx3C LINE L1 -34 6942 5353 4 768 10410 191 27 9 chrX 24035598 24038592 -142611704 + Lx4A LINE L1 3720 6772 -286 4 768 394 405 42 31 chrX 24038863 24039519 -142610777 - RMER1C Other Other -466 876 362 4 768 431 421 19 13 chrX 24039579 24039887 -142610409 - RMER1C Other Other -523 819 491 4 768 22 0 0 0 chrX 24039979 24040001 -142610295 + AT_rich Low_complexity Low_complexity 1 22 0 4 768 360 415 25 18 chrX 24040094 24040369 -142609927 - RMER1C Other Other -602 740 464 4 768 352 431 11 29 chrX 24040464 24040846 -142609450 - RMER1C Other Other -475 867 493 4 768 335 419 30 47 chrX 24041485 24041846 -142608450 - RMER1C Other Other -610 732 378 4 768 334 401 42 5 chrX 24042430 24042623 -142607673 - RMER1C Other Other -681 661 419 5 768 428 428 31 19 chrX 24042753 24043288 -142607008 - RMER1C Other Other -509 833 379 5 768 369 0 0 0 chrX 24043652 24043693 -142606603 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 768 423 0 0 0 chrX 24043693 24043739 -142606557 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 768 685 385 35 29 chrX 24043770 24044656 -142605640 - RMER1C Other Other -453 889 375 5 768 346 415 33 31 chrX 24045146 24045810 -142604486 - RMER1C Other Other -457 885 370 5 768 232 427 20 41 chrX 24046182 24046526 -142603770 - RMER1C Other Other -625 717 381 5 768 3000 63 0 3 chrX 24047017 24047388 -142602908 + L1_Mm LINE L1 5216 5586 -297 5 768 7856 57 1 0 chrX 24047388 24048371 -142601925 + L1Md_F2 LINE L1 5587 6570 -12 5 768 3943 81 0 2 chrX 24048372 24049213 -142601083 + L1Md_Gf LINE L1 828 1763 -4123 5 768 854 113 35 21 chrX 24049216 24049361 -142600935 - L1_Mus1 LINE L1 0 6567 6421 6 768 248 318 56 70 chrX 24049640 24049924 -142600372 - RMER17C LTR ERVK -48 362 83 6 768 5696 133 7 28 chrX 24050389 24051355 -142598941 + Lx3A LINE L1 6029 6974 -7 6 768 557 326 40 15 chrX 24053305 24053512 -142596784 - B4A SINE B4 -2 290 83 6 768 180 77 0 0 chrX 24053558 24053584 -142596712 + (TGG)n Simple_repeat Simple_repeat 1 26 0 6 768 296 342 116 34 chrX 24053680 24053913 -142596383 + L2 LINE L2 2049 2300 -1119 6 768 4602 133 12 19 chrX 24053918 24054715 -142595581 + YREP_Mm Unknown Unknown 986 1777 -35 6 768 441 298 0 0 chrX 24055559 24055663 -142594633 + B3 SINE B2 98 201 -15 6 768 405 275 67 0 chrX 24055723 24055843 -142594453 + B1F SINE Alu 21 148 -1 6 768 954 231 19 0 chrX 24055989 24056201 -142594095 + B3 SINE B2 1 216 0 6 768 642 319 95 37 chrX 24056426 24056699 -142593597 + B4A SINE B4 4 292 0 7 768 13194 145 33 54 chrX 24056825 24059522 -142590774 + L1VL2 LINE L1 300 2804 -1110 7 768 973 106 0 0 chrX 24059522 24059654 -142590642 + B1_Mus2 SINE Alu 3 134 -13 7 768 462 49 0 0 chrX 24059664 24059725 -142590571 + (TAA)n Simple_repeat Simple_repeat 2 62 0 7 768 13194 148 20 45 chrX 24059725 24060756 -142589540 + L1VL2 LINE L1 2808 3857 -2286 7 768 2109 42 0 53 chrX 24060762 24061062 -142589234 - RLTR10B LTR ERVK 0 292 9 7 768 251 111 0 0 chrX 24061092 24061128 -142589168 - RLTR10B LTR ERVK -248 44 9 7 768 327 91 0 0 chrX 24061182 24061226 -142589070 - RLTR10B LTR ERVK -248 44 1 7 768 6944 53 0 60 chrX 24061226 24062222 -142588074 - MMERVK10C-int LTR ERVK 0 7581 6646 7 768 2408 102 50 5 chrX 24062208 24062606 -142587690 - MMERVK10C-int LTR ERVK -1771 5810 5414 7 768 348 292 41 41 chrX 24062627 24062845 -142587451 - MMERVK10C-int LTR ERVK -6017 1564 1347 7 768 2372 20 115 9 chrX 24062840 24063178 -142587118 - MMERVK10C-int LTR ERVK -1074 913 553 7 768 191 132 56 56 chrX 24063178 24063250 -142587046 + CT-rich Low_complexity Low_complexity 3 74 0 7 768 2014 56 4 0 chrX 24063326 24063592 -142586704 - MMERVK10C-int LTR ERVK -7314 267 1 7 768 2109 42 0 53 chrX 24063592 24063892 -142586404 - RLTR10B LTR ERVK 0 292 9 7 768 251 111 0 0 chrX 24063922 24063958 -142586338 - RLTR10B LTR ERVK -248 44 9 7 768 327 91 0 0 chrX 24064012 24064056 -142586240 - RLTR10B LTR ERVK -248 44 1 8 768 4370 159 19 28 chrX 24064056 24064989 -142585307 + L1_Mur2 LINE L1 3826 4750 -1127 8 768 5280 139 19 1 chrX 24064990 24065841 -142584455 + Lx LINE L1 5787 6652 -2 8 768 21 0 0 0 chrX 24065841 24065862 -142584434 + AT_rich Low_complexity Low_complexity 1 21 0 8 768 678 25 0 0 chrX 24067140 24067220 -142583076 + (TC)n Simple_repeat Simple_repeat 2 81 0 8 768 237 33 0 0 chrX 24067221 24067251 -142583045 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 768 273 269 95 69 chrX 24067571 24067687 -142582609 + B1F SINE Alu 29 147 -2 8 768 232 333 47 70 chrX 24067682 24067702 -142582594 + ID_B1 SINE B4 70 195 -29 8 768 266 283 101 28 chrX 24067702 24067811 -142582485 + B1F SINE Alu 1 117 -32 8 768 783 294 39 24 chrX 24068594 24068800 -142581496 - B3 SINE B2 -6 210 2 8 768 936 133 7 0 chrX 24069055 24069198 -142581098 - B1_Mus1 SINE Alu -1 147 4 9 768 339 294 150 0 chrX 24069199 24069399 -142580897 - B4 SINE B4 -62 230 1 9 768 204 40 0 0 chrX 24069653 24069678 -142580618 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 9 768 222 276 155 0 chrX 24069685 24069743 -142580553 - ID4 SINE ID -13 70 4 9 768 21 36 0 0 chrX 24070041 24070069 -142580227 + AT_rich Low_complexity Low_complexity 1 28 0 9 768 325 322 49 8 chrX 24070317 24070439 -142579857 - B1F SINE Alu -3 146 20 9 768 23774 148 5 2 chrX 24070689 24075865 -142574431 + L1_Mus3 LINE L1 1445 6634 -4 9 768 198 118 0 0 chrX 24076296 24076330 -142573966 + (A)n Simple_repeat Simple_repeat 1 34 0 9 768 290 140 0 34 chrX 24076506 24076553 -142573743 + (TATATG)n Simple_repeat Simple_repeat 5 50 0 9 768 381 43 0 0 chrX 24076553 24076600 -142573696 + (CA)n Simple_repeat Simple_repeat 2 48 0 9 768 290 140 0 34 chrX 24076600 24076611 -142573685 + (TATATG)n Simple_repeat Simple_repeat 6 16 0 1 768 244 360 20 10 chrX 24077186 24077287 -142573009 + PB1D10 SINE Alu 1 102 -15 1 768 246 352 22 11 chrX 24078190 24078279 -142572017 - B3 SINE B2 -14 202 113 1 768 230 269 0 69 chrX 24078283 24078355 -142571941 - B4A SINE B4 -139 153 87 1 768 471 305 65 13 chrX 24078364 24078517 -142571779 - B3 SINE B2 -53 163 3 1 768 408 20 0 0 chrX 24078601 24078650 -142571646 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 768 6717 104 25 3 chrX 24078770 24080533 -142569763 - L1_Mus1 LINE L1 -1 6566 4778 1 768 7025 78 6 10 chrX 24080515 24081693 -142568603 - L1Md_F2 LINE L1 -1 6581 5405 1 768 16358 160 13 17 chrX 24081691 24085009 -142565287 - L1_Mus1 LINE L1 -1075 4808 1502 1 768 4392 64 9 1 chrX 24085017 24085685 -142564611 - L1_Mus2 LINE L1 -618 5948 5273 1 768 3522 151 26 33 chrX 24085685 24085809 -142564487 + L1_Mus3 LINE L1 5978 6100 -538 1 768 2584 82 0 3 chrX 24085809 24086152 -142564144 + ORR1A1 LTR MaLR 1 342 -4 1 768 3522 151 26 33 chrX 24086152 24086685 -142563611 + L1_Mus3 LINE L1 6101 6630 -8 1 768 726 202 119 8 chrX 24086686 24086946 -142563350 + L1_Mur3 LINE L1 2999 3287 -2593 1 768 1528 266 23 26 chrX 24086953 24087248 -142563048 + Lx6 LINE L1 5607 5903 -1557 1 768 1986 205 17 14 chrX 24087248 24087668 -142562628 + MTC LTR MaLR 1 421 0 1 768 1528 266 23 26 chrX 24087668 24087902 -142562394 + Lx6 LINE L1 5904 6134 -1326 1 768 2707 60 23 6 chrX 24088174 24088528 -142561768 + L1Md_F2 LINE L1 6214 6573 -9 1 768 1255 209 60 55 chrX 24088528 24088928 -142561368 + RLTR21 LTR ERVK 711 1112 -460 1 768 2953 89 7 2 chrX 24089197 24089615 -142560681 - BGLII LTR ERVK 0 421 2 1 768 2744 214 42 51 chrX 24089617 24090540 -142559756 - RMER3D-int LTR ERVK -1 2841 1927 1 768 2034 194 90 79 chrX 24090563 24090897 -142559399 - RMER3D-int LTR ERVK -1164 1678 1386 1 768 3327 40 2 0 chrX 24090897 24091292 -142559004 + MTA_Mm LTR MaLR 1 396 0 1 768 2034 194 90 79 chrX 24091292 24091613 -142558683 - RMER3D-int LTR ERVK -1457 1385 1016 1 768 413 152 77 26 chrX 24091659 24091814 -142558482 + CT-rich Low_complexity Low_complexity 3 165 0 1 768 516 233 75 40 chrX 24091869 24092177 -142558119 - RMER3D-int LTR ERVK -2038 804 354 1 768 589 218 25 40 chrX 24092243 24092444 -142557852 - RMER3D-int LTR ERVK -1993 849 652 1 768 468 128 0 0 chrX 24092459 24092547 -142557749 - RMER3D-int LTR ERVK -2278 564 489 1 768 1854 261 47 19 chrX 24092811 24093389 -142556907 - Lx7 LINE L1 -1042 6654 6061 1 768 634 258 51 29 chrX 24093425 24093700 -142556596 - Lx7 LINE L1 -1559 6137 5857 1 768 561 305 51 6 chrX 24093996 24094174 -142556122 + B3A SINE B2 1 186 -12 1 768 195 42 0 0 chrX 24094265 24094289 -142556007 + (GGAA)n Simple_repeat Simple_repeat 3 26 0 1 768 891 279 0 0 chrX 24094374 24094578 -142555718 - B3 SINE B2 -12 204 1 1 768 990 269 86 0 chrX 24095004 24095294 -142555002 - MER2 DNA MER2_type -30 315 1 1 768 771 187 61 14 chrX 24095453 24095665 -142554631 + L1_Mm LINE L1 5230 5451 -432 1 768 9008 165 18 48 chrX 24095699 24098473 -142551823 + L1_Mus1 LINE L1 261 2751 -3132 1 768 33824 36 0 0 chrX 24098474 24103702 -142546594 + L1Md_T LINE L1 265 5589 -297 1 768 8984 8 0 0 chrX 24103702 24104698 -142545598 + L1Md_T LINE L1 5590 6585 0 1 768 15972 125 9 81 chrX 24104809 24108985 -142541311 + L1_Mus1 LINE L1 2723 6567 0 1 768 4165 179 19 4 chrX 24108994 24109814 -142540482 + Lx2 LINE L1 5813 6645 -352 1 768 1158 152 5 0 chrX 24109812 24110010 -142540286 + Lx2 LINE L1 6775 6973 -24 1 768 569 42 0 0 chrX 24110012 24110083 -142540213 + L1Md_T LINE L1 5516 5586 -297 1 768 8369 36 0 1 chrX 24110083 24111080 -142539216 + L1Md_T LINE L1 5587 6582 0 1 768 5779 189 22 10 chrX 24111091 24112648 -142537648 + Lx4A LINE L1 5190 6772 -286 1 768 328 389 39 29 chrX 24112973 24113539 -142536757 - RMER1C Other Other -468 874 362 1 768 447 424 19 10 chrX 24113634 24113941 -142536355 - RMER1C Other Other -523 819 510 1 768 372 415 25 18 chrX 24114146 24114421 -142535875 - RMER1C Other Other -602 740 464 1 768 352 425 11 30 chrX 24114516 24114882 -142535414 - RMER1C Other Other -475 867 509 1 768 345 409 42 58 chrX 24115536 24115897 -142534399 - RMER1C Other Other -536 806 452 1 768 291 398 47 10 chrX 24116519 24116712 -142533584 - RMER1C Other Other -681 661 462 1 11 383 409 38 26 chrX 24116841 24117491 -142532805 - RMER1C Other Other -461 881 378 1 769 292 401 32 51 chrX 24117708 24117738 -142532558 - RMER1C Other Other -475 867 840 1 769 671 44 11 0 chrX 24117738 24117829 -142532467 + (TA)n Simple_repeat Simple_repeat 2 93 0 1 769 617 389 39 30 chrX 24117829 24118743 -142531553 - RMER1C Other Other -453 889 375 1 769 393 421 42 41 chrX 24119233 24119804 -142530492 - RMER1C Other Other -465 877 390 1 769 291 413 32 53 chrX 24120268 24120608 -142529688 - RMER1C Other Other -625 717 385 1 769 4208 194 21 2 chrX 24121337 24122180 -142528116 + L1Md_F2 LINE L1 233 1091 -5633 1 769 21072 71 151 3 chrX 24122178 24125321 -142524975 + L1Md_F2 LINE L1 1977 5585 -298 1 769 7739 61 1 2 chrX 24125322 24126307 -142523989 + L1Md_F2 LINE L1 5587 6570 -12 1 769 3858 90 0 6 chrX 24126310 24127151 -142523145 + L1Md_Gf LINE L1 830 1762 -4124 1 769 867 106 7 14 chrX 24127155 24127299 -142522997 - L1Md_F2 LINE L1 -12 6570 6428 1 769 247 333 45 56 chrX 24127600 24127867 -142522429 - RMER17C LTR ERVK -64 346 83 1 769 5756 129 7 28 chrX 24128330 24129297 -142520999 + Lx3A LINE L1 6028 6974 -7 1 769 248 306 57 50 chrX 24130637 24130778 -142519518 + L2 LINE L2 1518 1659 -1760 1 769 194 337 52 10 chrX 24131141 24131237 -142519059 + L2 LINE L2 1926 2025 -1394 1 769 586 319 40 15 chrX 24131251 24131458 -142518838 - B4A SINE B4 -2 290 83 1 769 366 324 113 35 chrX 24131627 24131857 -142518439 + L2 LINE L2 2053 2300 -1119 1 769 4597 133 12 19 chrX 24131862 24132659 -142517637 + YREP_Mm Unknown Unknown 986 1777 -35 1 769 468 279 0 0 chrX 24133502 24133606 -142516690 + B3 SINE B2 98 201 -15 1 769 362 261 75 8 chrX 24133666 24133786 -142516510 + B1F SINE Alu 21 148 -1 1 769 990 225 19 0 chrX 24133932 24134141 -142516155 + B3 SINE B2 1 213 -3 1 769 672 323 86 22 chrX 24134374 24134643 -142515653 + B4A SINE B4 4 289 -3 1 769 13894 176 36 68 chrX 24134773 24137462 -142512834 + L1VL2 LINE L1 300 2796 -3087 1 769 968 105 8 0 chrX 24137462 24137595 -142512701 + B1_Mus2 SINE Alu 1 134 -13 1 769 13894 161 17 68 chrX 24137595 24139130 -142511166 + L1VL2 LINE L1 2797 4223 -1660 1 769 5243 143 16 1 chrX 24139163 24140016 -142510280 + Lx LINE L1 5787 6652 -2 1 769 21 0 0 0 chrX 24140016 24140037 -142510259 + AT_rich Low_complexity Low_complexity 1 21 0 1 769 25 95 0 0 chrX 24140080 24140154 -142510142 + AT_rich Low_complexity Low_complexity 1 74 0 1 769 528 30 0 0 chrX 24141287 24141353 -142508943 + (TC)n Simple_repeat Simple_repeat 2 67 0 1 769 375 23 0 0 chrX 24141354 24141398 -142508898 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 769 24 0 0 0 chrX 24141676 24141700 -142508596 + AT_rich Low_complexity Low_complexity 1 24 0 1 769 254 278 134 60 chrX 24141700 24141834 -142508462 + B1F SINE Alu 4 147 -2 1 769 233 325 47 70 chrX 24141829 24141849 -142508447 + ID_B1 SINE B4 70 195 -29 1 769 266 274 101 28 chrX 24141849 24141958 -142508338 + B1F SINE Alu 1 117 -32 1 769 789 294 39 24 chrX 24142738 24142944 -142507352 - B3 SINE B2 -6 210 2 1 769 940 126 7 0 chrX 24143200 24143343 -142506953 - B1_Mus1 SINE Alu -1 147 4 1 769 357 266 160 10 chrX 24143344 24143544 -142506752 - B4 SINE B4 -62 230 1 1 769 225 0 0 0 chrX 24143806 24143831 -142506465 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1 769 21 36 0 0 chrX 24144192 24144220 -142506076 + AT_rich Low_complexity Low_complexity 1 28 0 1 769 321 322 49 8 chrX 24144468 24144590 -142505706 - B1F SINE Alu -3 146 20 1 769 25353 147 6 1 chrX 24144840 24150010 -142500286 + L1_Mus3 LINE L1 1445 6634 -4 1 769 219 114 0 0 chrX 24150438 24150473 -142499823 + (A)n Simple_repeat Simple_repeat 1 35 0 1 769 324 224 9 75 chrX 24150583 24150689 -142499607 - HAL1-3A_ME LINE L1 -784 2074 1976 1 769 285 182 0 0 chrX 24150690 24150745 -142499551 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 769 279 281 24 35 chrX 24151314 24151399 -142498897 + B4A SINE B4 82 165 -127 1 769 235 322 45 11 chrX 24152327 24152415 -142497881 - B3 SINE B2 -13 203 113 1 769 467 298 65 13 chrX 24152500 24152653 -142497643 - B3 SINE B2 -53 163 3 1 769 279 0 0 0 chrX 24152737 24152768 -142497528 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 769 7683 98 7 2 chrX 24152883 24154646 -142495650 - L1_Mus1 LINE L1 -1 6566 4795 1 769 5822 74 5 19 chrX 24154646 24155457 -142494839 - L1Md_F2 LINE L1 0 6582 5783 1 769 8420 56 20 2 chrX 24155458 24157227 -142493069 - L1Md_T LINE L1 0 6582 4795 1 769 6002 78 5 14 chrX 24157227 24158060 -142492236 - L1Md_F2 LINE L1 0 6582 5758 1 769 25277 20 0 0 chrX 24158073 24161028 -142489268 + L1_Mm LINE L1 2735 5689 -194 1 769 2984 79 8 0 chrX 24161025 24161417 -142488879 - L1_Mm LINE L1 -84 5799 5405 1 769 17868 155 11 17 chrX 24161415 24164753 -142485543 - L1Md_T LINE L1 -1075 4808 1492 1 769 6722 154 28 13 chrX 24164751 24166083 -142484213 - L1_Mus3 LINE L1 -690 5948 4601 1 769 638 189 9 0 chrX 24166082 24166193 -142484103 - Lx4A LINE L1 -228 6830 6719 1 769 2051 257 68 3 chrX 24167054 24167660 -142482636 - Lx2B LINE L1 -14 6986 6342 1 769 2734 169 64 15 chrX 24167657 24167819 -142482477 + L1_Mur2 LINE L1 4537 4730 -1147 1 769 180 0 0 0 chrX 24167819 24167839 -142482457 + (TAA)n Simple_repeat Simple_repeat 1 20 0 1 769 2734 169 64 15 chrX 24167839 24168288 -142482008 + L1_Mur2 LINE L1 4731 5178 -699 1 769 410 182 22 11 chrX 24168461 24168550 -142481746 - URR1B DNA MER1_type 0 225 136 1 769 24 32 0 0 chrX 24168654 24168685 -142481611 + AT_rich Low_complexity Low_complexity 1 31 0 1 769 2798 241 23 10 chrX 24168825 24169813 -142480483 - Lx6 LINE L1 -1352 6108 5105 1 769 1121 220 37 9 chrX 24169818 24170144 -142480152 - Lx6 LINE L1 -2035 3845 3511 1 769 515 250 77 43 chrX 24170144 24170306 -142479990 - Lx6 LINE L1 -3397 2480 2324 1 769 315 0 0 0 chrX 24170306 24170341 -142479955 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 769 515 250 77 43 chrX 24170341 24170387 -142479909 - Lx6 LINE L1 -3554 2323 2267 1 769 643 302 60 28 chrX 24170393 24170611 -142479685 - ORR1D2 LTR MaLR -145 225 1 1 769 404 393 4 0 chrX 24170613 24170847 -142479449 + Lx8 LINE L1 6956 7190 -283 1 769 551 325 0 6 chrX 24170957 24171121 -142479175 + ORR1D2 LTR MaLR 1 163 -207 1 769 17498 29 0 0 chrX 24171122 24173315 -142476981 + L1_Mm LINE L1 2699 4891 -992 1 769 671 276 49 0 chrX 24173315 24173518 -142476778 + ORR1D2 LTR MaLR 157 369 -1 1 769 479 248 8 8 chrX 24173673 24173795 -142476501 + Lx8 LINE L1 6640 6761 -712 1 769 254 379 0 0 chrX 24174656 24174772 -142475524 + RMER1C Other Other 537 652 -690 2 769 311 41 52 39 chrX 24175528 24175605 -142474691 + (CAAAAA)n Simple_repeat Simple_repeat 1 78 0 2 769 258 325 138 19 chrX 24175725 24175885 -142474411 + RMER1C Other Other 488 666 -676 2 769 10350 109 6 19 chrX 24176394 24178895 -142471401 - L1Md_A LINE L1 -3185 2698 233 2 769 269 410 37 23 chrX 24180648 24181002 -142469294 + RMER1C Other Other 487 845 -497 2 769 433 388 32 17 chrX 24181499 24181947 -142468349 + RMER1C Other Other 375 864 -478 2 769 432 0 0 0 chrX 24182416 24182464 -142467832 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 769 250 432 23 20 chrX 24182827 24183248 -142467048 + RMER1C Other Other 412 833 -509 2 769 244 393 47 10 chrX 24183488 24183681 -142466615 + RMER1C Other Other 462 661 -681 2 769 229 425 35 38 chrX 24184499 24184844 -142465452 + RMER1C Other Other 494 837 -505 2 769 249 418 20 29 chrX 24185314 24185676 -142464620 + RMER1C Other Other 398 783 -559 2 769 240 405 26 22 chrX 24185774 24186001 -142464295 + RMER1C Other Other 464 691 -651 2 769 264 438 16 4 chrX 24186318 24186561 -142463735 + RMER1C Other Other 499 744 -598 2 769 272 397 45 13 chrX 24186762 24187276 -142463020 + RMER1C Other Other 466 865 -477 2 769 9778 189 28 8 chrX 24187540 24190526 -142459770 - Lx4A LINE L1 -279 6779 3725 2 769 5983 189 36 7 chrX 24190538 24192106 -142458190 + Lx3C LINE L1 5353 6964 -12 2 769 4179 179 44 6 chrX 24192112 24193106 -142457190 - Lx2 LINE L1 -43 6957 5822 2 769 4428 103 5 5 chrX 24193118 24193762 -142456534 - L1_Mus1 LINE L1 0 6567 5924 2 769 35094 33 5 7 chrX 24193762 24199561 -142450735 + L1Md_A LINE L1 1 5587 -296 2 769 8319 39 0 0 chrX 24199562 24200555 -142449741 + L1Md_A LINE L1 5589 6581 -1 2 769 24861 134 6 75 chrX 24200567 24205958 -142444338 - L1_Mus1 LINE L1 -630 5937 968 2 769 331 113 0 27 chrX 24206236 24206309 -142443987 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 769 614 252 55 33 chrX 24206320 24206595 -142443701 + Lx7 LINE L1 5857 6137 -1559 2 769 1703 279 47 17 chrX 24206631 24207208 -142443088 + Lx7 LINE L1 6061 6654 -1042 2 769 443 145 0 0 chrX 24207472 24207560 -142442736 + RMER3D-int LTR ERVK 489 564 -2278 2 769 605 207 25 40 chrX 24207575 24207776 -142442520 + RMER3D-int LTR ERVK 652 849 -1993 2 769 511 226 32 31 chrX 24207862 24208197 -142442099 + RMER3D-int LTR ERVK 354 804 -2038 2 769 472 84 89 30 chrX 24208208 24208343 -142441953 + GA-rich Low_complexity Low_complexity 3 145 0 2 769 2087 197 90 82 chrX 24208388 24208708 -142441588 + RMER3D-int LTR ERVK 1014 1383 -1459 2 769 3208 56 2 0 chrX 24208708 24209103 -142441193 - MTA_Mm LTR MaLR 0 396 1 2 769 2087 197 90 82 chrX 24209103 24209457 -142440839 + RMER3D-int LTR ERVK 1384 1694 -1148 2 769 2565 201 118 15 chrX 24209460 24210384 -142439912 + MYSERV16_I-int LTR ERVK 1308 2326 0 2 769 2889 98 5 2 chrX 24210384 24210804 -142439492 + BGLII LTR ERVK 1 421 0 2 769 1339 196 76 52 chrX 24211043 24211474 -142438822 - RLTR21 LTR ERVK -150 1254 706 2 769 11090 91 3 2 chrX 24211474 24213805 -142436491 - L1Md_F2 LINE L1 -13 6569 4237 2 769 12241 112 20 31 chrX 24213801 24216569 -142433727 - L1Md_F2 LINE L1 -2718 3165 450 2 769 824 148 11 56 chrX 24216572 24216751 -142433545 - RLTR21 LTR ERVK -855 717 547 2 769 198 0 0 0 chrX 24216758 24216780 -142433516 + (A)n Simple_repeat Simple_repeat 1 22 0 2 769 1475 226 18 39 chrX 24216797 24217128 -142433168 - RLTR21 LTR ERVK -1248 324 1 2 769 281 289 0 17 chrX 24217511 24217627 -142432669 - Lx6 LINE L1 -15 7445 7332 2 769 350 326 26 18 chrX 24217627 24217855 -142432441 - Lx6 LINE L1 -1326 6134 5905 2 769 2187 191 15 15 chrX 24217861 24218270 -142432026 - MTC LTR MaLR 0 421 13 2 769 1196 222 17 14 chrX 24218280 24218577 -142431719 - Lx7 LINE L1 -1792 5904 5607 2 769 1028 199 28 3 chrX 24218584 24218866 -142431430 - L1_Mur3 LINE L1 -2593 3287 2999 2 769 3651 145 21 24 chrX 24218867 24219398 -142430898 - L1_Mus3 LINE L1 -7 6631 6101 2 769 2471 65 62 3 chrX 24219398 24219721 -142430575 - ORR1A1 LTR MaLR -4 342 1 2 769 3651 145 21 24 chrX 24219721 24219845 -142430451 - L1_Mus3 LINE L1 -538 6100 5978 2 769 2132 54 57 13 chrX 24219845 24220145 -142430151 + L1Md_F2 LINE L1 5273 5585 -298 2 769 7078 82 5 14 chrX 24220146 24221148 -142429148 + L1Md_F2 LINE L1 5587 6579 -3 2 769 242 161 35 35 chrX 24222475 24222533 -142427763 + GA-rich Low_complexity Low_complexity 2 59 0 2 769 438 241 24 65 chrX 24222692 24222861 -142427435 - L1_Rod LINE L1 -305 5542 5381 2 769 2163 201 78 42 chrX 24222861 24223415 -142426881 + RLTR31A_Mm LTR ERVK 11 584 0 2 769 282 200 104 9 chrX 24223415 24223521 -142426775 - L1_Rod LINE L1 -475 5372 5257 2 769 812 159 13 46 chrX 24223660 24223812 -142426484 - B1_Mus1 SINE Alu 0 148 2 2 769 3099 325 32 26 chrX 24224253 24224547 -142425749 - RodERV21-int LTR ERV1 -195 4796 4501 2 769 2687 123 35 58 chrX 24224547 24224977 -142425319 - RLTR9B2 LTR ERVK 0 420 1 2 769 3099 325 32 26 chrX 24224977 24226111 -142424185 - RodERV21-int LTR ERV1 -491 4500 3359 2 769 38258 48 1 3 chrX 24226118 24232604 -142417692 - L1Md_T LINE L1 0 6585 53 2 769 1137 284 0 6 chrX 24233654 24233966 -142416330 - MuRRS4-int LTR ERV1 -118 4945 4636 2 769 811 204 0 6 chrX 24233957 24234115 -142416181 - MuRRS4-int LTR ERV1 -119 4944 4788 2 769 1754 146 8 0 chrX 24234238 24234492 -142415804 - MuRRS4-int LTR ERV1 -2872 2191 1936 2 769 1022 106 9 83 chrX 24234500 24234717 -142415579 - MuRRS4-int LTR ERV1 -1995 1304 1104 2 769 1590 255 113 6 chrX 24234739 24235207 -142415089 - MuRRS4-int LTR ERV1 -3617 1446 929 2 769 755 262 16 74 chrX 24235312 24235568 -142414728 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 2 769 569 139 111 17 chrX 24235568 24235685 -142414611 - MuRRS4-int LTR ERV1 -4186 877 750 2 769 422 222 9 66 chrX 24235669 24235775 -142414521 - RMER16-int LTR ERVK -3958 1448 1349 2 769 4347 137 23 3 chrX 24235874 24236557 -142413739 - RMER16-int LTR ERVK -4045 1361 665 2 769 1244 238 65 22 chrX 24236577 24236899 -142413397 - MuRRS4-int LTR ERV1 -4388 675 340 2 769 644 256 55 81 chrX 24237243 24237793 -142412503 - MuRRS4-int LTR ERV1 -4565 498 5 2 769 669 287 69 40 chrX 24237795 24238071 -142412225 - LTRIS4 LTR ERV1 0 507 224 2 769 425 302 59 78 chrX 24238836 24239156 -142411140 - RodERV21-int LTR ERV1 -3035 4056 3743 2 769 1340 277 16 51 chrX 24239438 24239868 -142410428 - RodERV21-int LTR ERV1 -2273 2718 2304 2 769 4785 93 23 0 chrX 24239873 24240538 -142409758 - L1_Mus3 LINE L1 -247 6391 5712 2 769 1452 159 0 0 chrX 24240540 24240766 -142409530 + L1_Mus3 LINE L1 5473 5698 -185 2 769 1723 172 15 27 chrX 24240766 24241095 -142409201 - RLTR14 LTR ERV1 -51 331 7 2 769 512 194 0 11 chrX 24241120 24241214 -142409082 - RLTR14-int LTR ERV1 -5 5312 5220 2 769 1640 178 118 6 chrX 24241237 24241594 -142408702 - RLTR14-int LTR ERV1 -205 5112 4716 2 769 1914 115 27 66 chrX 24241594 24241929 -142408367 - RLTRETN_Mm LTR ERVK 0 322 1 2 769 10634 153 57 54 chrX 24241929 24245328 -142404968 - MMETn-int LTR ERVK 0 4844 1 2 769 236 242 45 116 chrX 24245333 24245445 -142404851 - RLTRETN_Mm LTR ERVK 0 420 304 2 96 31514 82 28 5 chrX 24245445 24250361 -142399935 - L1Md_F LINE L1 -532 5351 315 2 770 6847 93 11 8 chrX 24250362 24251295 -142399001 - L1Md_F LINE L1 -5494 1025 90 2 770 362 176 286 0 chrX 24251347 24251438 -142398858 + MMETn-int LTR ERVK 2473 2546 -2298 2 770 4707 69 5 10 chrX 24251438 24252039 -142398257 + L1Md_F2 LINE L1 5954 6554 -28 2 770 3934 34 2 0 chrX 24252039 24252480 -142397816 + L1Md_T LINE L1 6140 6581 -1 2 770 4707 66 5 10 chrX 24252480 24252496 -142397800 + L1Md_F2 LINE L1 6555 6572 -10 2 770 203 0 0 36 chrX 24252505 24252533 -142397763 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2 770 3057 188 18 42 chrX 24252537 24253450 -142396846 + MMETn-int LTR ERVK 2542 3719 -1125 2 770 779 195 0 0 chrX 24253445 24253568 -142396728 + MMETn-int LTR ERVK 6539 6661 -745 2 770 3486 201 50 18 chrX 24253599 24254340 -142395956 - RLTR14-int LTR ERV1 -2117 3200 2436 2 770 1838 223 55 32 chrX 24255795 24256318 -142393978 + RLTR40 LTR ERVK 22 556 -261 2 770 446 155 10 0 chrX 24256320 24256417 -142393879 + GA-rich Low_complexity Low_complexity 2 99 0 2 770 595 284 52 44 chrX 24256417 24256604 -142393692 + RLTR40 LTR ERVK 566 752 -65 2 770 6608 92 30 2 chrX 24256604 24257021 -142393275 - RLTR13B1 LTR ERVK 0 893 471 2 770 552 15 0 0 chrX 24257021 24257086 -142393210 + (TG)n Simple_repeat Simple_repeat 2 66 0 2 770 6608 92 30 2 chrX 24257086 24257537 -142392759 - RLTR13B1 LTR ERVK -423 470 2 2 770 595 284 52 44 chrX 24257537 24257599 -142392697 + RLTR40 LTR ERVK 753 817 0 2 770 396 0 0 0 chrX 24257790 24257834 -142392462 + (TAA)n Simple_repeat Simple_repeat 2 45 0 2 770 680 245 68 11 chrX 24259366 24259556 -142390740 - Lx9 LINE L1 -243 7401 7201 2 770 338 253 0 0 chrX 24259554 24259645 -142390651 + Lx9 LINE L1 7552 7642 -2 2 770 529 268 14 7 chrX 24259649 24259792 -142390504 + Lx5 LINE L1 6825 6968 -82 2 770 213 39 0 0 chrX 24259807 24259833 -142390463 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 2 770 667 225 35 14 chrX 24259845 24259989 -142390307 + B1_Mur2 SINE Alu 1 147 -2 2 770 2037 170 31 0 chrX 24259997 24260356 -142389940 + L1_Mus3 LINE L1 6261 6630 -8 2 770 30 45 0 0 chrX 24260369 24260413 -142389883 + AT_rich Low_complexity Low_complexity 1 44 0 2 770 222 192 0 71 chrX 24260479 24260535 -142389761 + A-rich Low_complexity Low_complexity 4 55 0 2 770 764 265 19 14 chrX 24260544 24260758 -142389538 + Lx4B LINE L1 6809 7023 -35 2 770 2952 183 32 2 chrX 24260794 24261386 -142388910 - L1_Mur2 LINE L1 -1176 4701 4092 2 770 9922 141 39 23 chrX 24261386 24262756 -142387540 - RLTR22_Mur LTR ERVK 0 1848 461 2 770 457 55 0 27 chrX 24262756 24262831 -142387465 + (TAG)n Simple_repeat Simple_repeat 3 75 0 2 770 9922 141 39 23 chrX 24262831 24263278 -142387018 - RLTR22_Mur LTR ERVK -1388 460 3 2 770 835 177 198 0 chrX 24263278 24263521 -142386775 - L1_Mur2 LINE L1 -1782 4095 3805 2 770 1468 141 21 4 chrX 24263563 24263805 -142386491 + L1_Mus4 LINE L1 6391 6636 0 2 770 225 0 0 0 chrX 24264294 24264319 -142385977 + (CAAAG)n Simple_repeat Simple_repeat 3 27 0 2 770 24 0 0 0 chrX 24265712 24265736 -142384560 + AT_rich Low_complexity Low_complexity 1 24 0 2 770 398 269 22 7 chrX 24266021 24266156 -142384140 + L1_Mur2 LINE L1 4334 4470 -1407 2 770 940 316 45 30 chrX 24266161 24266596 -142383700 + Lx6 LINE L1 6506 7296 -164 2 770 1695 188 20 90 chrX 24266571 24267027 -142383269 - L1_Mur2 LINE L1 -2134 3743 3320 2 770 1302 63 0 0 chrX 24267028 24267186 -142383110 - L1_Mus1 LINE L1 0 6567 6410 2 770 22297 128 5 4 chrX 24267186 24270186 -142380110 - L1_Mus1 LINE L1 -431 6136 3134 2 770 243 0 0 0 chrX 24270186 24270213 -142380083 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 770 22297 137 6 5 chrX 24270213 24271050 -142379246 - L1_Mus1 LINE L1 -2750 3133 2295 2 770 1403 183 52 0 chrX 24271051 24271302 -142378994 + L1VL1 LINE L1 3 266 -6156 2 770 5260 133 29 14 chrX 24271302 24272998 -142377298 + L1Md_F LINE L1 277 1998 -3885 2 770 9945 61 18 32 chrX 24272997 24274360 -142375936 + L1Md_T LINE L1 2 1344 -5380 2 770 15551 26 3 0 chrX 24276665 24278597 -142371699 + L1Md_T LINE L1 3650 5586 -297 2 770 7718 45 40 0 chrX 24278597 24279554 -142370742 + L1Md_T LINE L1 5587 6581 -1 2 770 25535 89 2 30 chrX 24279555 24281030 -142369266 + L1Md_F2 LINE L1 1987 3462 -2421 2 770 1198 84 73 0 chrX 24281030 24281209 -142369087 + B2_Mm2 SINE B2 4 195 0 2 770 25535 84 2 27 chrX 24281209 24283873 -142366423 + L1Md_F2 LINE L1 3463 6015 -567 2 770 1879 142 29 6 chrX 24283873 24284220 -142366076 - ETnERV2-int LTR ERVK -3611 3795 3441 2 770 780 158 6 58 chrX 24284445 24284619 -142365677 - ETnERV2-int LTR ERVK -2654 2190 2026 2 770 557 82 0 0 chrX 24284627 24284700 -142365596 + L1Md_F2 LINE L1 5513 5585 -298 2 770 7874 58 1 2 chrX 24284701 24285685 -142364611 + L1Md_F2 LINE L1 5587 6569 -13 2 770 2444 173 37 34 chrX 24285686 24286340 -142363956 - ETnERV2-int LTR ERVK -4297 3109 1934 2 770 1402 157 18 18 chrX 24286364 24286649 -142363647 - ETnERV2-int LTR ERVK -5321 2085 1801 2 770 1325 272 34 7 chrX 24286898 24287313 -142362983 + MuRRS4-int LTR ERV1 1019 1444 -3619 2 770 332 224 53 101 chrX 24287335 24287374 -142362922 + MuRRS4-int LTR ERV1 1610 1648 -3042 2 770 465 34 0 0 chrX 24287374 24287433 -142362863 + (GA)n Simple_repeat Simple_repeat 1 59 0 2 770 4961 158 34 30 chrX 24287433 24289666 -142360630 + MuRRS4-int LTR ERV1 1300 4276 -787 2 770 630 210 0 7 chrX 24289667 24289811 -142360485 + MuRRS4-int LTR ERV1 4802 4944 -119 2 770 981 283 0 7 chrX 24289802 24290104 -142360192 + MuRRS4-int LTR ERV1 4636 4935 -128 2 770 2900 338 28 36 chrX 24290686 24292297 -142357999 + RodERV21-int LTR ERV1 2905 4500 -491 2 770 2509 110 40 61 chrX 24292297 24292724 -142357572 + RLTR9B2 LTR ERVK 3 420 0 2 770 2900 338 28 36 chrX 24292724 24293016 -142357280 + RodERV21-int LTR ERV1 4501 4793 -198 2 770 857 142 7 47 chrX 24293463 24293611 -142356685 + B1_Mus1 SINE Alu 7 148 0 2 770 837 243 31 54 chrX 24293696 24294355 -142355941 + L1Md_F2 LINE L1 217 1040 -5684 2 770 30502 60 1 11 chrX 24294353 24298616 -142351680 + L1Md_F2 LINE L1 1367 5586 -297 2 770 7531 62 21 0 chrX 24298616 24299580 -142350716 + L1Md_F2 LINE L1 5587 6570 -12 2 770 1198 208 84 47 chrX 24299580 24300008 -142350288 + RLTR21 LTR ERVK 707 1254 -150 2 770 2428 92 6 3 chrX 24300246 24300605 -142349691 - BGLII LTR ERVK 0 421 62 3 770 2509 213 101 8 chrX 24300612 24301442 -142348854 - MYSERV16_I-int LTR ERVK -112 2214 1308 3 770 1933 200 90 82 chrX 24301465 24301800 -142348496 - RMER3D-int LTR ERVK -1164 1678 1384 3 770 3240 51 2 0 chrX 24301800 24302195 -142348101 + MTA_Mm LTR MaLR 1 396 0 3 770 1933 200 90 82 chrX 24302195 24302517 -142347779 - RMER3D-int LTR ERVK -1459 1383 1016 3 770 407 207 0 63 chrX 24302563 24302754 -142347542 + CT-rich Low_complexity Low_complexity 2 180 0 3 770 411 177 13 0 chrX 24302772 24302851 -142347445 - RMER3D-int LTR ERVK -2274 568 489 3 770 520 194 16 35 chrX 24302923 24303070 -142347226 - RMER3D-int LTR ERVK -2069 773 650 3 770 607 212 25 40 chrX 24303160 24303361 -142346935 - RMER3D-int LTR ERVK -1993 849 652 3 770 390 184 0 0 chrX 24303388 24303464 -142346832 - RMER3D-int LTR ERVK -2278 564 489 3 770 1778 264 42 28 chrX 24303731 24304305 -142345991 - Lx7 LINE L1 -1042 6654 6073 3 770 593 262 51 29 chrX 24304343 24304618 -142345678 - Lx7 LINE L1 -1559 6137 5857 3 770 231 190 17 17 chrX 24304629 24304688 -142345608 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 770 658 284 39 78 chrX 24304932 24305138 -142345158 + B3A SINE B2 1 198 0 3 770 339 25 0 0 chrX 24305202 24305242 -142345054 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 3 770 793 288 10 0 chrX 24305326 24305531 -142344765 - B3 SINE B2 -9 207 1 3 770 1023 271 82 0 chrX 24305951 24306243 -142344053 - MER2 DNA MER2_type -24 321 6 3 770 809 197 48 5 chrX 24306408 24306617 -142343679 + L1_Mm LINE L1 5234 5451 -432 3 770 447 283 38 123 chrX 24306663 24307030 -142343266 + L1VL1 LINE L1 57 392 -6030 3 770 470 230 16 8 chrX 24307164 24307291 -142343005 + L1_Mus1 LINE L1 675 802 -5814 3 770 24210 132 11 66 chrX 24307300 24313511 -142336785 + L1_Mus1 LINE L1 725 6567 0 3 770 4276 172 17 5 chrX 24313523 24314336 -142335960 + Lx2 LINE L1 5823 6645 -352 3 770 1113 184 23 0 chrX 24314331 24314548 -142335748 + Lx2 LINE L1 6770 6991 -6 3 770 385 235 39 19 chrX 24314841 24314945 -142335351 - ID_B1 SINE B4 -2 222 117 3 770 606 241 50 50 chrX 24314945 24315124 -142335172 - Lx3C LINE L1 -57 6919 6741 3 770 353 394 26 19 chrX 24315254 24315518 -142334778 - RMER1C Other Other -613 729 464 3 770 256 435 8 12 chrX 24315736 24315978 -142334318 - RMER1C Other Other -593 749 509 3 770 275 406 17 11 chrX 24316640 24316817 -142333479 - RMER1C Other Other -691 651 474 3 770 241 394 36 36 chrX 24317626 24317821 -142332475 - RMER1C Other Other -581 761 567 3 770 290 420 35 14 chrX 24317938 24318323 -142331973 - RMER1C Other Other -540 802 379 3 770 426 20 0 0 chrX 24318837 24318888 -142331408 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 770 189 0 0 0 chrX 24318888 24318908 -142331388 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 770 537 379 40 17 chrX 24319479 24319825 -142330471 - RMER1C Other Other -468 874 521 3 770 229 424 28 31 chrX 24320621 24320979 -142329317 - RMER1C Other Other -468 874 518 3 770 2616 133 2 4 chrX 24322415 24322868 -142327428 + L1Md_F2 LINE L1 640 1091 -5633 3 770 2593 96 0 2 chrX 24322866 24323261 -142327035 + L1Md_F2 LINE L1 1977 2370 -3513 3 770 19378 75 0 3 chrX 24323274 24326014 -142324282 + L1Md_F2 LINE L1 2852 5585 -298 3 770 7814 60 4 2 chrX 24326015 24327008 -142323288 + L1Md_F2 LINE L1 5587 6581 -1 3 770 3844 78 0 0 chrX 24327008 24327844 -142322452 + L1Md_Gf LINE L1 830 1762 -4124 3 770 838 120 35 21 chrX 24327848 24327993 -142322303 - L1_Mus1 LINE L1 0 6567 6421 3 770 283 311 56 70 chrX 24328272 24328556 -142321740 - RMER17C LTR ERVK -48 362 83 3 770 5862 135 13 28 chrX 24328994 24329987 -142320309 + Lx3A LINE L1 5997 6974 -7 3 770 219 343 35 28 chrX 24331323 24331464 -142318832 + L2 LINE L2 1518 1659 -1760 3 770 181 347 52 10 chrX 24331827 24331923 -142318373 + L2 LINE L2 1926 2025 -1394 3 770 546 333 40 15 chrX 24331937 24332144 -142318152 - B4A SINE B4 -2 290 83 3 770 228 86 0 0 chrX 24332190 24332225 -142318071 + (TGG)n Simple_repeat Simple_repeat 1 35 0 3 770 334 345 112 30 chrX 24332321 24332554 -142317742 + L2 LINE L2 2049 2300 -1119 3 770 4454 142 12 19 chrX 24332559 24333356 -142316940 + YREP_Mm Unknown Unknown 986 1777 -35 3 770 24 109 0 0 chrX 24333610 24333711 -142316585 + AT_rich Low_complexity Low_complexity 1 101 0 3 770 423 279 0 37 chrX 24334201 24334309 -142315987 + B3 SINE B2 98 201 -15 3 770 384 252 75 8 chrX 24334369 24334489 -142315807 + B1F SINE Alu 21 148 -1 3 770 964 227 19 0 chrX 24334635 24334842 -142315454 + B3 SINE B2 1 211 -5 3 770 621 319 95 37 chrX 24335077 24335350 -142314946 + B4A SINE B4 4 292 0 3 770 17095 178 36 51 chrX 24335476 24338179 -142312117 + L1VL2 LINE L1 300 2807 -3076 3 770 1000 97 0 0 chrX 24338179 24338313 -142311983 + B1_Mus2 SINE Alu 1 134 -13 3 770 633 110 0 0 chrX 24338323 24338423 -142311873 + (TAA)n Simple_repeat Simple_repeat 2 101 0 3 770 17095 164 18 40 chrX 24338423 24340386 -142309910 + L1VL2 LINE L1 2811 4755 -1128 3 770 5259 140 19 1 chrX 24340387 24341238 -142309058 + Lx LINE L1 5787 6652 -2 3 770 21 89 0 0 chrX 24341302 24341358 -142308938 + AT_rich Low_complexity Low_complexity 1 56 0 3 770 591 15 0 0 chrX 24342535 24342603 -142307693 + (TC)n Simple_repeat Simple_repeat 2 69 0 3 770 237 33 0 0 chrX 24342604 24342634 -142307662 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 770 269 269 95 69 chrX 24342954 24343070 -142307226 + B1F SINE Alu 29 147 -2 3 770 225 333 47 70 chrX 24343065 24343085 -142307211 + ID_B1 SINE B4 70 195 -29 3 770 257 283 101 28 chrX 24343085 24343194 -142307102 + B1F SINE Alu 1 117 -32 3 770 773 294 39 24 chrX 24343977 24344183 -142306113 - B3 SINE B2 -6 210 2 3 770 987 114 0 0 chrX 24344441 24344581 -142305715 - B1_Mus1 SINE Alu -5 143 4 3 770 475 286 106 51 chrX 24344582 24344799 -142305497 - B4 SINE B4 -63 229 1 3 770 180 0 0 0 chrX 24345057 24345077 -142305219 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 770 231 346 0 0 chrX 24345375 24345427 -142304869 + ID4 SINE ID 4 55 -28 3 770 21 36 0 0 chrX 24345440 24345468 -142304828 + AT_rich Low_complexity Low_complexity 1 28 0 3 770 311 331 49 8 chrX 24345716 24345838 -142304458 - B1F SINE Alu -3 146 20 3 770 4022 116 16 14 chrX 24346088 24346777 -142303519 + MusHAL1 LINE L1 243 932 -1780 3 770 225 0 0 0 chrX 24346789 24346814 -142303482 + (A)n Simple_repeat Simple_repeat 1 25 0 3 770 16225 136 7 2 chrX 24346814 24350303 -142299993 + L1_Mus3 LINE L1 3132 6633 -5 3 770 208 147 0 0 chrX 24350734 24350768 -142299528 + (A)n Simple_repeat Simple_repeat 1 34 0 3 770 240 111 0 0 chrX 24350954 24350990 -142299306 + (TATATG)n Simple_repeat Simple_repeat 3 38 0 3 770 381 43 0 0 chrX 24350990 24351036 -142299260 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 770 264 350 20 10 chrX 24351623 24351724 -142298572 + PB1D10 SINE Alu 1 102 -15 3 770 261 341 22 11 chrX 24352629 24352718 -142297578 - B3 SINE B2 -14 202 113 3 770 221 269 0 69 chrX 24352722 24352794 -142297502 - B4A SINE B4 -139 153 87 3 770 411 304 67 13 chrX 24352803 24352953 -142297343 - B3 SINE B2 -53 163 6 3 770 369 0 0 0 chrX 24353040 24353081 -142297215 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 770 6905 102 25 22 chrX 24353201 24354983 -142295313 - L1_Mus1 LINE L1 0 6567 4795 3 770 7312 78 4 10 chrX 24354992 24356159 -142294137 - L1Md_F2 LINE L1 -15 6567 5405 3 770 17860 157 11 14 chrX 24356157 24359487 -142290809 - L1_Mus1 LINE L1 -1075 4808 1492 3 770 6597 158 27 16 chrX 24359485 24360824 -142289472 - L1_Mus3 LINE L1 -690 5948 4601 3 770 624 189 9 0 chrX 24360823 24360934 -142289362 - Lx4A LINE L1 -228 6830 6719 3 770 2204 260 68 3 chrX 24361794 24362400 -142287896 - Lx2B LINE L1 -14 6986 6342 3 770 3064 157 73 13 chrX 24362397 24362552 -142287744 + Lx6 LINE L1 4537 4702 -1175 3 770 282 29 0 0 chrX 24362552 24362587 -142287709 + (TAA)n Simple_repeat Simple_repeat 2 36 0 3 770 3064 157 73 13 chrX 24362587 24363037 -142287259 + Lx6 LINE L1 4703 5178 -699 3 770 284 129 111 16 chrX 24363210 24363273 -142287023 - URR1B DNA MER1_type 0 225 157 3 770 432 0 0 0 chrX 24363275 24363323 -142286973 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 770 336 290 71 47 chrX 24363679 24363849 -142286447 + RLTR1B LTR ERV1 166 339 -173 3 770 24 32 0 0 chrX 24363984 24364015 -142286281 + AT_rich Low_complexity Low_complexity 1 31 0 3 770 1821 238 8 24 chrX 24364155 24364757 -142285539 - Lx6 LINE L1 -1352 6108 5512 3 770 8230 36 1 0 chrX 24364756 24366063 -142284233 - L1Md_T LINE L1 -1 6581 5273 3 770 3577 161 17 20 chrX 24366063 24366187 -142284109 + L1_Mus3 LINE L1 5978 6100 -538 3 770 2634 76 0 3 chrX 24366187 24366530 -142283766 + ORR1A1 LTR MaLR 1 342 -4 3 770 3577 161 17 20 chrX 24366530 24367060 -142283236 + L1_Mus3 LINE L1 6101 6630 -8 3 770 1086 199 28 11 chrX 24367061 24367345 -142282951 + L1_Mur3 LINE L1 2999 3287 -2593 3 770 1642 265 20 28 chrX 24367374 24367648 -142282648 + Lx6 LINE L1 5630 5903 -1557 3 770 1943 205 17 17 chrX 24367648 24368069 -142282227 + MTC LTR MaLR 1 421 0 3 770 1642 265 20 28 chrX 24368069 24368303 -142281993 + Lx6 LINE L1 5904 6134 -1326 3 770 2637 63 25 6 chrX 24368573 24368926 -142281370 + L1Md_F2 LINE L1 6214 6573 -9 3 770 1254 208 76 40 chrX 24368926 24369351 -142280945 + RLTR21 LTR ERVK 711 1254 -150 3 770 2947 86 7 2 chrX 24369589 24370007 -142280289 - BGLII LTR ERVK 0 421 2 3 770 2905 218 44 50 chrX 24370009 24370940 -142279356 - RMER3D-int LTR ERVK -1 2841 1917 3 770 2193 205 88 79 chrX 24370954 24371289 -142279007 - RMER3D-int LTR ERVK -1164 1678 1386 3 770 3328 38 2 0 chrX 24371289 24371684 -142278612 + MTA_Mm LTR MaLR 1 396 0 3 770 2193 205 88 79 chrX 24371684 24372005 -142278291 - RMER3D-int LTR ERVK -1457 1385 1016 3 770 491 141 75 25 chrX 24372051 24372211 -142278085 + CT-rich Low_complexity Low_complexity 3 170 0 3 770 541 233 70 39 chrX 24372273 24372575 -142277721 - RMER3D-int LTR ERVK -2038 804 354 3 770 666 207 25 40 chrX 24372641 24372842 -142277454 - RMER3D-int LTR ERVK -1993 849 652 3 770 448 152 0 0 chrX 24372857 24372945 -142277351 - RMER3D-int LTR ERVK -2280 562 489 3 770 1982 264 52 19 chrX 24373208 24373786 -142276510 - Lx7 LINE L1 -1042 6654 6058 3 770 712 258 51 29 chrX 24373824 24374099 -142276197 - Lx7 LINE L1 -1559 6137 5857 3 770 610 299 51 6 chrX 24374395 24374573 -142275723 + B3A SINE B2 1 186 -12 3 770 252 86 0 0 chrX 24374663 24374698 -142275598 + (GGAA)n Simple_repeat Simple_repeat 3 37 0 3 770 4403 18 0 0 chrX 24374790 24375296 -142275000 + L1Md_T LINE L1 5081 5586 -297 3 770 8936 5 0 4 chrX 24375296 24376296 -142274000 + L1Md_T LINE L1 5587 6582 0 3 770 819 299 0 0 chrX 24376361 24376565 -142273731 - B3 SINE B2 -12 204 1 3 770 980 280 84 0 chrX 24376985 24377281 -142273015 - MER2 DNA MER2_type -24 321 1 3 770 900 180 61 14 chrX 24377440 24377654 -142272642 + L1_Mm LINE L1 5230 5453 -430 3 770 2137 248 53 57 chrX 24377698 24378817 -142271479 + L1_Mus1 LINE L1 217 1205 -5433 4 96 17262 192 12 64 chrX 24378814 24384672 -142265624 + L1_Mus1 LINE L1 1071 6565 -2 4 771 4662 169 19 4 chrX 24384668 24385505 -142264791 + Lx2 LINE L1 5793 6648 -349 4 771 1303 155 14 0 chrX 24385497 24385716 -142264580 + Lx2 LINE L1 6770 6991 -6 4 771 381 200 0 13 chrX 24386008 24386084 -142264212 - ID_B1 SINE B4 -2 222 148 4 771 6258 187 38 8 chrX 24386105 24387660 -142262636 - Lx3C LINE L1 -12 6964 5354 4 771 7148 178 32 10 chrX 24387668 24389113 -142261183 + Lx4A LINE L1 3720 5196 -681 4 771 4651 32 0 0 chrX 24389108 24389787 -142260509 - L1Md_T LINE L1 -595 5987 5309 4 771 581 64 0 0 chrX 24389782 24389860 -142260436 + L1Md_T LINE L1 5509 5586 -297 4 771 7854 39 39 0 chrX 24389861 24390819 -142259477 + L1Md_T LINE L1 5588 6582 0 4 771 5343 190 23 10 chrX 24390830 24392393 -142257903 + Lx4A LINE L1 5190 6779 -279 4 771 258 336 34 34 chrX 24392761 24392909 -142257387 - RMER1C Other Other -758 584 437 4 771 228 423 20 15 chrX 24393067 24393264 -142257032 - RMER1C Other Other -585 757 560 4 771 439 415 12 0 chrX 24393373 24393626 -142256670 - RMER1C Other Other -523 819 564 4 771 319 395 33 26 chrX 24393892 24394162 -142256134 - RMER1C Other Other -607 735 464 4 771 286 423 8 12 chrX 24394380 24394622 -142255674 - RMER1C Other Other -593 749 509 4 771 405 0 0 0 chrX 24395038 24395083 -142255213 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 771 275 415 19 27 chrX 24395291 24395652 -142254644 - RMER1C Other Other -536 806 378 4 771 258 405 31 31 chrX 24396289 24396480 -142253816 - RMER1C Other Other -585 757 567 4 771 366 23 0 0 chrX 24397479 24397522 -142252774 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 771 465 378 43 20 chrX 24398090 24398436 -142251860 - RMER1C Other Other -468 874 521 4 771 245 425 25 19 chrX 24398973 24399287 -142251009 - RMER1C Other Other -540 802 487 4 771 23649 128 17 52 chrX 24450076 24454352 -142195944 + L1_Mm LINE L1 1616 5738 -145 4 771 1604 63 13 5 chrX 24454352 24454576 -142195720 + MT2_Mm LTR ERVL 268 493 0 4 771 977 139 0 0 chrX 24454586 24454744 -142195552 - L1_Mm LINE L1 -1520 4363 4206 4 771 3879 180 50 5 chrX 24454737 24455769 -142194527 - Lx3C LINE L1 -553 6423 5353 4 771 10493 183 30 14 chrX 24455781 24458635 -142191661 + Lx4A LINE L1 3725 6631 -427 4 771 26923 43 0 0 chrX 24458635 24461976 -142188320 + L1_Mm LINE L1 1710 5051 -832 4 771 362 383 46 10 chrX 24462796 24462991 -142187305 - RMER1C Other Other -679 663 462 4 771 411 421 42 30 chrX 24463121 24463656 -142186640 - RMER1C Other Other -509 833 378 4 771 289 375 47 34 chrX 24464045 24464370 -142185926 - RMER1C Other Other -605 737 414 4 771 582 385 40 17 chrX 24464598 24464944 -142185352 - RMER1C Other Other -468 874 521 4 771 338 431 30 39 chrX 24465448 24465983 -142184313 - RMER1C Other Other -444 898 375 4 771 243 436 12 32 chrX 24466467 24466806 -142183490 - RMER1C Other Other -625 717 386 4 771 3608 167 8 3 chrX 24467536 24468184 -142182112 + L1Md_F2 LINE L1 441 1091 -5633 4 771 2683 96 0 2 chrX 24468182 24468577 -142181719 + L1Md_F2 LINE L1 1977 2370 -3513 4 771 20600 71 0 3 chrX 24468588 24471330 -142178966 + L1Md_F2 LINE L1 2850 5585 -298 4 771 7718 65 4 0 chrX 24471331 24472323 -142177973 + L1Md_F2 LINE L1 5587 6582 0 4 771 4034 75 0 0 chrX 24472323 24473156 -142177140 + L1Md_Gf LINE L1 833 1762 -4124 4 771 800 127 35 21 chrX 24473160 24473305 -142176991 - L1_Mus1 LINE L1 0 6567 6421 4 771 273 307 56 70 chrX 24473584 24473868 -142176428 - RMER17C LTR ERVK -48 362 83 4 771 24 0 0 0 chrX 24474172 24474196 -142176100 + AT_rich Low_complexity Low_complexity 1 24 0 4 771 5828 130 6 27 chrX 24474332 24475299 -142174997 + Lx3A LINE L1 6028 6974 -7 4 771 231 320 62 37 chrX 24476612 24476774 -142173522 + L2 LINE L2 1494 1659 -1760 4 771 181 347 52 10 chrX 24477137 24477233 -142173063 + L2 LINE L2 1926 2025 -1394 4 771 574 320 40 15 chrX 24477247 24477454 -142172842 - B4A SINE B4 -2 290 83 4 771 228 86 0 0 chrX 24477500 24477535 -142172761 + (TGG)n Simple_repeat Simple_repeat 1 35 0 4 771 346 325 115 39 chrX 24477631 24477865 -142172431 + L2 LINE L2 2049 2300 -1119 4 771 4625 131 12 19 chrX 24477870 24478667 -142171629 + YREP_Mm Unknown Unknown 986 1777 -35 4 771 454 289 0 0 chrX 24479508 24479612 -142170684 + B3 SINE B2 98 201 -15 4 771 384 252 75 8 chrX 24479672 24479792 -142170504 + B1F SINE Alu 21 148 -1 4 771 912 237 19 0 chrX 24479938 24480145 -142170151 + B3 SINE B2 1 211 -5 4 771 624 327 97 34 chrX 24480378 24480647 -142169649 + B4A SINE B4 4 289 -3 4 771 17325 176 37 49 chrX 24480777 24483470 -142166826 + L1VL2 LINE L1 300 2807 -3076 4 771 893 127 0 0 chrX 24483470 24483604 -142166692 + B1_Mus2 SINE Alu 1 134 -13 4 771 267 93 0 0 chrX 24483614 24483657 -142166639 + (TAA)n Simple_repeat Simple_repeat 2 44 0 4 771 17325 161 20 38 chrX 24483657 24485613 -142164683 + L1VL2 LINE L1 2809 4755 -1128 4 771 5186 145 19 1 chrX 24485614 24486465 -142163831 + Lx LINE L1 5787 6652 -2 4 771 21 0 0 0 chrX 24486465 24486486 -142163810 + AT_rich Low_complexity Low_complexity 1 21 0 4 771 26 88 0 0 chrX 24486529 24486597 -142163699 + AT_rich Low_complexity Low_complexity 1 68 0 4 771 519 17 0 0 chrX 24487761 24487821 -142162475 + (TC)n Simple_repeat Simple_repeat 2 61 0 4 771 471 18 0 0 chrX 24487822 24487878 -142162418 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 771 280 259 95 69 chrX 24488198 24488314 -142161982 + B1F SINE Alu 29 147 -2 4 771 228 333 47 70 chrX 24488309 24488329 -142161967 + ID_B1 SINE B4 70 195 -29 4 771 248 292 101 28 chrX 24488329 24488438 -142161858 + B1F SINE Alu 1 117 -32 4 771 805 275 44 29 chrX 24489221 24489427 -142160869 - B3 SINE B2 -6 210 2 4 771 921 127 14 0 chrX 24489682 24489824 -142160472 - B1_Mus1 SINE Alu -1 147 4 4 771 358 264 162 10 chrX 24489825 24490023 -142160273 - B4 SINE B4 -62 230 3 4 771 21 36 0 0 chrX 24490660 24490688 -142159608 + AT_rich Low_complexity Low_complexity 1 28 0 4 771 321 322 49 8 chrX 24490936 24491058 -142159238 - B1F SINE Alu -3 146 20 4 771 25339 147 6 2 chrX 24491308 24496479 -142153817 + L1_Mus3 LINE L1 1445 6634 -4 4 771 208 147 0 0 chrX 24496910 24496944 -142153352 + (A)n Simple_repeat Simple_repeat 1 34 0 4 771 195 129 0 0 chrX 24497126 24497157 -142153139 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 771 387 0 0 0 chrX 24497159 24497202 -142153094 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 771 351 0 0 0 chrX 24497202 24497241 -142153055 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 771 264 350 20 10 chrX 24497816 24497917 -142152379 + PB1D10 SINE Alu 1 102 -15 4 771 235 352 22 11 chrX 24498821 24498910 -142151386 - B3 SINE B2 -14 202 113 4 771 213 284 0 69 chrX 24498914 24498986 -142151310 - B4A SINE B4 -139 153 87 4 771 445 305 65 13 chrX 24498995 24499148 -142151148 - B3 SINE B2 -53 163 3 4 771 441 0 0 0 chrX 24499232 24499281 -142151015 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 771 4356 96 2 7 chrX 24499401 24500000 -142150296 - L1_Mus1 LINE L1 0 6567 5972 4 771 6615 113 35 1 chrX 24500022 24501191 -142149105 - L1_Mus1 LINE L1 -595 5972 4778 1 771 6894 82 8 6 chrX 24501172 24502350 -142147946 - L1Md_F2 LINE L1 0 6582 5405 2 771 16688 159 11 15 chrX 24502348 24505680 -142144616 - L1_Mus1 LINE L1 -1075 4808 1492 1 771 6390 157 27 7 chrX 24505678 24507002 -142143294 - L1_Mus3 LINE L1 -690 5948 4601 3 771 567 207 9 0 chrX 24507001 24507112 -142143184 - Lx4A LINE L1 -228 6830 6719 4 771 1879 264 69 15 chrX 24507968 24508580 -142141716 - Lx2B LINE L1 -14 6986 6342 5 771 2923 156 66 13 chrX 24508577 24508737 -142141559 + L1_Mur2 LINE L1 4537 4730 -1147 6 771 188 35 35 0 chrX 24508737 24508766 -142141530 + (TAA)n Simple_repeat Simple_repeat 1 30 0 7 771 2923 156 66 13 chrX 24508766 24509215 -142141081 + L1_Mur2 LINE L1 4731 5178 -699 6 771 471 111 97 39 chrX 24509388 24509462 -142140834 - URR1B DNA MER1_type 0 225 150 8 771 216 0 0 0 chrX 24509462 24509486 -142140810 + (TA)n Simple_repeat Simple_repeat 2 25 0 9 771 471 111 97 39 chrX 24509486 24509514 -142140782 - URR1B DNA MER1_type -76 149 117 8 771 326 252 45 0 chrX 24509888 24510015 -142140281 + RLTR1B LTR ERV1 259 454 -170 1 771 24 32 0 0 chrX 24510153 24510184 -142140112 + AT_rich Low_complexity Low_complexity 1 31 0 1 96 1700 237 7 15 chrX 24510324 24510923 -142139373 - Lx6 LINE L1 -1352 6108 5512 1 772 24404 49 150 3 chrX 24510922 24516230 -142134066 - L1Md_T LINE L1 -1 6584 335 1 772 1351 237 44 2 chrX 24516226 24516636 -142133660 - Lx6 LINE L1 -349 5531 5105 1 772 1117 220 37 9 chrX 24516641 24516967 -142133329 - Lx6 LINE L1 -2035 3845 3511 1 772 644 240 57 33 chrX 24516967 24517131 -142133165 - Lx6 LINE L1 -3397 2480 2324 1 772 495 0 0 0 chrX 24517131 24517186 -142133110 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 772 644 240 57 33 chrX 24517186 24517232 -142133064 - Lx6 LINE L1 -3554 2323 2266 1 772 650 322 50 18 chrX 24517238 24517456 -142132840 - ORR1D2 LTR MaLR -145 225 1 1 772 397 393 4 0 chrX 24517458 24517692 -142132604 + Lx8 LINE L1 6956 7190 -283 1 772 941 287 47 22 chrX 24517794 24518154 -142132142 + ORR1D2 LTR MaLR 1 369 -1 1 772 441 264 8 23 chrX 24518309 24518441 -142131855 + Lx8 LINE L1 6640 6769 -704 1 772 233 244 12 25 chrX 24518696 24518776 -142131520 - Lx9 LINE L1 -1398 6246 6168 1 772 225 442 0 0 chrX 24518829 24518967 -142131329 + RMER1C Other Other 535 672 -670 2 772 260 379 0 0 chrX 24519290 24519406 -142130890 + RMER1C Other Other 537 652 -690 2 772 231 441 4 4 chrX 24519514 24519744 -142130552 + RMER1C Other Other 412 641 -701 2 772 297 164 0 0 chrX 24520164 24520237 -142130059 + A-rich Low_complexity Low_complexity 1 73 0 2 772 250 366 6 16 chrX 24521504 24521717 -142128579 + RMER1C Other Other 626 874 -468 2 772 32904 70 4 8 chrX 24522081 24526723 -142123573 - L1Md_F3 LINE L1 0 6584 1970 2 772 207 0 0 0 chrX 24526723 24526746 -142123550 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 772 32904 122 11 28 chrX 24526746 24528509 -142121787 - L1Md_F3 LINE L1 -3914 1969 233 2 772 288 0 0 0 chrX 24529713 24529745 -142120551 + (A)n Simple_repeat Simple_repeat 1 32 0 2 772 493 386 35 15 chrX 24531165 24531613 -142118683 + RMER1C Other Other 375 874 -468 2 772 227 403 35 22 chrX 24531739 24531970 -142118326 + RMER1C Other Other 504 737 -605 2 772 378 0 0 0 chrX 24532082 24532124 -142118172 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 772 297 0 0 0 chrX 24532124 24532156 -142118140 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 772 316 436 21 19 chrX 24532516 24533051 -142117245 + RMER1C Other Other 378 833 -509 3 772 261 409 26 0 chrX 24533213 24533367 -142116929 + RMER1C Other Other 419 576 -766 3 772 275 422 22 28 chrX 24534000 24534543 -142115753 + RMER1C Other Other 378 726 -616 3 772 245 428 12 29 chrX 24535015 24535359 -142114937 + RMER1C Other Other 509 846 -496 3 772 300 405 26 19 chrX 24535475 24535739 -142114557 + RMER1C Other Other 464 729 -613 3 772 369 423 12 0 chrX 24536015 24536263 -142114033 + RMER1C Other Other 421 671 -671 3 772 290 393 25 31 chrX 24536371 24536875 -142113421 + RMER1C Other Other 374 865 -477 3 772 27401 38 0 0 chrX 24536979 24541615 -142108681 - L1Md_Gf LINE L1 -1059 4827 95 3 772 3375 8 0 0 chrX 24541615 24541993 -142108303 + L1Md_T LINE L1 6205 6582 0 3 772 227 411 20 13 chrX 24542002 24542155 -142108141 + RMER1C Other Other 498 651 -691 4 772 234 0 0 0 chrX 24542370 24542396 -142107900 + (TA)n Simple_repeat Simple_repeat 1 26 0 4 772 326 401 26 19 chrX 24543272 24543536 -142106760 + RMER1C Other Other 464 729 -613 4 772 21 0 0 0 chrX 24543640 24543661 -142106635 + AT_rich Low_complexity Low_complexity 1 21 0 4 772 295 424 43 10 chrX 24543752 24544052 -142106244 + RMER1C Other Other 510 819 -523 4 772 324 390 47 29 chrX 24544160 24544766 -142105530 + RMER1C Other Other 374 884 -458 4 772 9729 183 33 11 chrX 24545031 24548013 -142102283 - Lx4A LINE L1 -279 6779 3725 4 772 3206 172 49 10 chrX 24548025 24548958 -142101338 + Lx3C LINE L1 5353 6316 -660 4 772 1403 204 16 3 chrX 24548960 24549274 -142101022 - Lx2 LINE L1 -857 6140 5823 4 772 15964 194 11 61 chrX 24549287 24555115 -142095181 - L1_Mus1 LINE L1 0 6567 1071 4 772 1903 206 23 0 chrX 24555112 24555582 -142094714 - L1Md_F LINE L1 -5411 1108 628 5 772 464 259 21 7 chrX 24555579 24555723 -142094573 - L1Md_F LINE L1 -5801 718 573 5 772 495 289 15 116 chrX 24555778 24556236 -142094060 - L1VL1 LINE L1 -6030 392 48 5 772 816 189 68 20 chrX 24556273 24556489 -142093807 - Lx2 LINE L1 -694 5479 5252 4 772 808 283 10 0 chrX 24556605 24556810 -142093486 + B3 SINE B2 1 207 -9 5 772 417 39 0 0 chrX 24556894 24556945 -142093351 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 5 772 577 297 29 68 chrX 24557013 24557219 -142093077 - B3A SINE B2 0 198 1 5 772 686 265 49 35 chrX 24557521 24557806 -142092490 + Lx7 LINE L1 5857 6145 -1551 5 772 1977 262 50 21 chrX 24557832 24558409 -142091887 + Lx7 LINE L1 6061 6654 -1042 5 772 513 133 0 0 chrX 24558673 24558761 -142091535 + RMER3D-int LTR ERVK 489 564 -2278 5 772 569 225 35 40 chrX 24558776 24558975 -142091321 + RMER3D-int LTR ERVK 652 849 -1993 5 772 616 233 30 39 chrX 24559061 24559359 -142090937 + RMER3D-int LTR ERVK 354 810 -2032 5 772 503 184 0 63 chrX 24559372 24559563 -142090733 + GA-rich Low_complexity Low_complexity 2 180 0 5 772 2376 189 85 60 chrX 24559585 24559931 -142090365 + RMER3D-int LTR ERVK 1016 1383 -1459 5 772 3411 35 2 0 chrX 24559931 24560326 -142089970 - MTA_Mm LTR MaLR 0 396 1 6 772 2376 192 88 79 chrX 24560326 24560661 -142089635 + RMER3D-int LTR ERVK 1384 1678 -1164 5 772 2698 228 46 52 chrX 24560684 24561605 -142088691 + RMER3D-int LTR ERVK 1927 2841 -1 5 772 2872 98 7 7 chrX 24561606 24562027 -142088269 + BGLII LTR ERVK 1 421 0 5 772 1120 214 70 57 chrX 24562297 24562699 -142087597 - RLTR21 LTR ERVK -460 1112 706 6 772 12115 86 5 1 chrX 24562700 24565038 -142085258 - L1Md_F2 LINE L1 -12 6570 4225 6 772 9704 115 129 6 chrX 24565020 24566015 -142084281 - L1Md_A LINE L1 -750 3164 1961 6 772 211 71 48 0 chrX 24566015 24566057 -142084239 + (TTG)n Simple_repeat Simple_repeat 2 45 0 6 772 9704 152 69 19 chrX 24566057 24567600 -142082696 - L1Md_A LINE L1 -1954 1960 446 6 772 621 191 17 51 chrX 24567603 24567780 -142082516 - RLTR21 LTR ERVK -855 717 547 6 772 198 0 0 0 chrX 24567788 24567810 -142082486 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 6 772 1374 215 24 40 chrX 24567827 24568156 -142082140 - RLTR21 LTR ERVK -1248 324 1 6 772 257 307 0 17 chrX 24568552 24568668 -142081628 - Lx6 LINE L1 -15 7445 7332 6 772 464 317 26 18 chrX 24568668 24568896 -142081400 - Lx6 LINE L1 -1326 6134 5905 6 772 1926 201 17 15 chrX 24568902 24569311 -142080985 - MTC LTR MaLR 0 421 12 6 772 1285 218 14 21 chrX 24569321 24569611 -142080685 - Lx7 LINE L1 -1792 5904 5617 6 772 1127 203 28 3 chrX 24569626 24569908 -142080388 - L1_Mur3 LINE L1 -2593 3287 2999 6 772 3612 153 18 23 chrX 24569909 24570440 -142079856 - L1_Mus3 LINE L1 -8 6630 6101 7 772 2741 67 0 3 chrX 24570440 24570783 -142079513 - ORR1A1 LTR MaLR -4 342 1 7 772 3612 153 18 23 chrX 24570783 24570907 -142079389 - L1_Mus3 LINE L1 -538 6100 5978 7 772 2506 58 3 3 chrX 24570908 24571221 -142079075 + L1Md_F2 LINE L1 5274 5586 -297 7 772 7285 78 6 14 chrX 24571222 24572223 -142078073 + L1Md_F2 LINE L1 5588 6580 -2 7 772 1383 309 37 43 chrX 24572235 24572775 -142077521 - RodERV21-int LTR ERV1 -3339 1652 1116 7 772 209 169 49 33 chrX 24574094 24574155 -142076141 + GA-rich Low_complexity Low_complexity 2 63 0 7 772 484 227 25 62 chrX 24574320 24574480 -142075816 - L1_Rod LINE L1 -313 5534 5381 7 772 2036 216 65 29 chrX 24574480 24575034 -142075262 + RLTR31A_Mm LTR ERVK 11 584 0 7 772 258 196 107 10 chrX 24575034 24575137 -142075159 - L1_Rod LINE L1 -475 5372 5260 7 772 799 142 7 47 chrX 24575280 24575428 -142074868 - B1_Mus1 SINE Alu 0 148 7 7 772 292 260 30 30 chrX 24575676 24575775 -142074521 - RMER17C-int LTR ERVK -2 3236 3138 7 772 3635 317 40 48 chrX 24575843 24576134 -142074162 - RodERV21-int LTR ERV1 -198 4793 4501 7 772 2461 123 35 54 chrX 24576134 24576562 -142073734 - RLTR9B2 LTR ERVK 0 420 1 8 772 3635 317 40 48 chrX 24576562 24578174 -142072122 - RodERV21-int LTR ERV1 -491 4500 2905 7 772 3352 78 20 16 chrX 24578289 24578783 -142071513 + LTRIS2 LTR ERV1 69 564 0 8 772 730 120 52 10 chrX 24578932 24579103 -142071193 + RLTR1B-int LTR ERV1 63 293 -3006 8 772 957 126 90 17 chrX 24579447 24579625 -142070671 + RMER16-int LTR ERVK 141 331 -5075 8 772 4097 153 52 18 chrX 24579611 24580316 -142069980 + RMER16-int LTR ERVK 690 1418 -3988 8 772 2668 202 108 43 chrX 24580320 24581218 -142069078 + RLTR1B-int LTR ERV1 835 1797 -3266 8 772 183 42 0 0 chrX 24581218 24581242 -142069054 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8 772 5280 87 151 88 chrX 24581242 24582484 -142067812 + RLTR1B-int LTR ERV1 1260 2555 -744 8 772 1126 150 58 5 chrX 24582471 24582732 -142067564 + RLTR1B-int LTR ERV1 2669 2813 -486 8 772 1089 167 54 25 chrX 24582958 24583198 -142067098 + RLTR1B-int LTR ERV1 4791 5037 -26 8 772 3480 64 20 12 chrX 24583198 24583690 -142066606 + LTRIS2 LTR ERV1 69 564 0 8 772 1170 273 3 7 chrX 24584164 24584474 -142065822 - MuRRS4-int LTR ERV1 -118 4945 4637 8 772 751 196 0 7 chrX 24584474 24584623 -142065673 - MuRRS4-int LTR ERV1 -128 4935 4788 8 772 5300 155 58 32 chrX 24584614 24586921 -142063375 - MuRRS4-int LTR ERV1 -792 4271 1104 8 772 1482 272 33 7 chrX 24586943 24587365 -142062931 - MuRRS4-int LTR ERV1 -3619 1444 1012 8 772 763 192 0 79 chrX 24587607 24587771 -142062525 + LSU-rRNA_Hsa rRNA rRNA 3514 3664 -1371 8 772 627 145 92 17 chrX 24587771 24587890 -142062406 - MuRRS4-int LTR ERV1 -4186 877 750 8 772 333 172 80 34 chrX 24587874 24587992 -142062304 - RMER16-int LTR ERVK -3958 1448 1386 9 772 4312 128 25 10 chrX 24588081 24588767 -142061529 - RMER16-int LTR ERVK -4045 1361 666 9 772 1201 240 66 22 chrX 24588796 24589116 -142061180 - MuRRS4-int LTR ERV1 -4388 675 342 8 772 672 242 51 77 chrX 24589451 24590002 -142060294 - MuRRS4-int LTR ERV1 -4565 498 5 9 772 606 227 96 29 chrX 24590004 24590213 -142060083 - LTRIS4 LTR ERV1 0 507 285 9 772 305 24 24 0 chrX 24590878 24590920 -142059376 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 9 772 481 347 27 42 chrX 24591079 24591557 -142058739 - RodERV21-int LTR ERV1 -3035 4056 3586 9 772 1350 284 14 49 chrX 24591682 24592112 -142058184 - RodERV21-int LTR ERV1 -2273 2718 2304 9 772 4497 110 24 0 chrX 24592117 24592781 -142057515 - L1_Mus3 LINE L1 -247 6391 5712 9 772 1531 137 0 0 chrX 24592783 24593009 -142057287 + L1_Mus3 LINE L1 5473 5698 -185 9 772 1542 193 12 21 chrX 24593009 24593337 -142056959 - RLTR14 LTR ERV1 -51 331 7 9 772 8785 191 104 25 chrX 24593362 24595324 -142054972 - RLTR14-int LTR ERV1 -5 5312 3195 9 772 1120 170 190 48 chrX 24595324 24595682 -142054614 + RLTR9E LTR ERVK 1 409 0 9 772 715 217 11 56 chrX 24595684 24595947 -142054349 + ETnERV2-int LTR ERVK 2 317 -2997 9 772 346 146 0 18 chrX 24596002 24596058 -142054238 + ETnERV2-int LTR ERVK 1074 1128 -6278 9 772 290 167 0 0 chrX 24596493 24596547 -142053749 + RMER16-int LTR ERVK 141 194 -5212 9 772 708 12 0 0 chrX 24596550 24596631 -142053665 + (TTC)n Simple_repeat Simple_repeat 2 82 0 9 772 1923 176 64 12 chrX 24596638 24597057 -142053239 + ETnERV2-int LTR ERVK 1648 2088 -5318 9 772 2865 175 38 30 chrX 24597078 24597732 -142052564 + ETnERV2-int LTR ERVK 1934 3135 -4271 9 772 7715 73 1 9 chrX 24597733 24598798 -142051498 - L1Md_F2 LINE L1 -14 6568 5513 1 772 843 142 6 105 chrX 24598798 24598979 -142051317 + ETnERV2-int LTR ERVK 2028 2190 -2654 9 772 3788 134 47 3 chrX 24599204 24599825 -142050471 + ETnERV2-int LTR ERVK 3441 4088 -3318 1 772 812 224 148 10 chrX 24599811 24600121 -142050175 + ETnERV2-int LTR ERVK 4597 4949 -2295 1 772 34011 90 4 18 chrX 24600147 24606494 -142043802 - L1Md_F2 LINE L1 -12 6570 315 1 772 7082 89 1 7 chrX 24606495 24607437 -142042859 - L1Md_F LINE L1 -5494 1025 90 1 772 382 177 271 0 chrX 24607496 24607592 -142042704 + MMETn-int LTR ERVK 2473 2554 -2290 1 772 4928 55 0 7 chrX 24607592 24608201 -142042095 + L1Md_F2 LINE L1 5966 6570 -12 1 772 382 192 0 88 chrX 24608201 24608231 -142042065 + MMETn-int LTR ERVK 2555 2576 -2268 1 772 222 116 0 0 chrX 24608232 24608275 -142042021 + (A)n Simple_repeat Simple_repeat 1 43 0 1 772 3169 181 13 40 chrX 24608275 24609194 -142041102 + MMETn-int LTR ERVK 2541 3719 -1125 1 772 718 219 0 0 chrX 24609189 24609312 -142040984 + MMETn-int LTR ERVK 6539 6661 -745 1 772 3446 206 44 17 chrX 24609343 24610088 -142040208 - RLTR14-int LTR ERV1 -2117 3200 2436 1 772 1856 217 63 44 chrX 24611531 24612056 -142038240 + RLTR40 LTR ERVK 22 556 -261 1 772 329 149 15 0 chrX 24612056 24612123 -142038173 + GA-rich Low_complexity Low_complexity 2 69 0 1 772 497 292 73 53 chrX 24612140 24612323 -142037973 + RLTR40 LTR ERVK 567 752 -65 1 772 6211 96 24 5 chrX 24612323 24613199 -142037097 - RLTR13B1 LTR ERVK 0 893 1 1 772 497 292 73 53 chrX 24613199 24613261 -142037035 + RLTR40 LTR ERVK 753 817 0 1 772 423 0 0 0 chrX 24613452 24613499 -142036797 + (TAA)n Simple_repeat Simple_repeat 2 48 0 1 772 207 0 0 0 chrX 24613499 24613522 -142036774 + (GAA)n Simple_repeat Simple_repeat 1 23 0 1 772 1276 27 0 0 chrX 24613895 24614042 -142036254 + B1_Mus2 SINE Alu 1 147 0 1 772 180 0 0 0 chrX 24614042 24614062 -142036234 + (A)n Simple_repeat Simple_repeat 1 20 0 1 772 645 228 60 11 chrX 24615259 24615441 -142034855 - Lx9 LINE L1 -253 7391 7201 1 772 401 191 0 0 chrX 24615441 24615525 -142034771 + Lx9 LINE L1 7554 7637 -7 1 772 488 287 13 0 chrX 24615534 24615684 -142034612 + Lx5 LINE L1 6825 6976 -74 1 772 315 0 0 0 chrX 24615692 24615727 -142034569 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 1 772 646 208 34 14 chrX 24615742 24615888 -142034408 + B1_Mur3 SINE Alu 1 149 0 1 772 276 30 0 0 chrX 24615888 24615921 -142034375 + (A)n Simple_repeat Simple_repeat 1 33 0 1 772 1920 159 45 0 chrX 24615929 24616282 -142034014 + L1_Mus3 LINE L1 6262 6630 -8 1 772 26 50 0 0 chrX 24616294 24616334 -142033962 + AT_rich Low_complexity Low_complexity 1 40 0 1 772 227 263 0 0 chrX 24616400 24616457 -142033839 + A-rich Low_complexity Low_complexity 4 60 0 1 772 698 261 19 14 chrX 24616466 24616680 -142033616 + Lx4B LINE L1 6809 7023 -35 1 772 2711 175 37 2 chrX 24616716 24617305 -142032991 - L1_Mur2 LINE L1 -1176 4701 4092 1 772 10085 141 39 25 chrX 24617305 24618680 -142031616 - RLTR22_Mur LTR ERVK 0 1848 461 1 772 622 87 0 19 chrX 24618680 24618785 -142031511 + (TAG)n Simple_repeat Simple_repeat 3 105 0 1 772 10085 141 39 25 chrX 24618785 24619232 -142031064 - RLTR22_Mur LTR ERVK -1388 460 3 1 772 1169 194 17 14 chrX 24619232 24619520 -142030776 - L1_Mur2 LINE L1 -1782 4095 3807 1 772 1341 138 29 4 chrX 24619564 24619804 -142030492 + L1_Mus4 LINE L1 6391 6636 0 1 772 8660 23 0 1 chrX 24619836 24620895 -142029401 + L1Md_T LINE L1 4529 5586 -297 1 772 8009 57 0 0 chrX 24620895 24621891 -142028405 + L1Md_T LINE L1 5587 6582 0 1 772 180 0 0 0 chrX 24622261 24622281 -142028015 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 1 772 24 0 0 0 chrX 24623673 24623697 -142026599 + AT_rich Low_complexity Low_complexity 1 24 0 1 772 295 276 22 7 chrX 24623981 24624116 -142026180 + L1_Mur2 LINE L1 4334 4470 -1407 1 772 718 331 43 26 chrX 24624121 24624555 -142025741 + Lx6 LINE L1 6506 7296 -164 1 772 1441 194 20 90 chrX 24624532 24624986 -142025310 - L1_Mur2 LINE L1 -2136 3741 3320 1 772 1159 70 6 0 chrX 24624988 24625145 -142025151 - L1_Mus1 LINE L1 0 6567 6410 1 772 20808 123 6 3 chrX 24625145 24628137 -142022159 - L1_Mus1 LINE L1 -431 6136 3134 1 772 210 37 0 0 chrX 24628137 24628164 -142022132 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 772 20808 135 7 4 chrX 24628164 24629003 -142021293 - L1_Mus1 LINE L1 -2750 3133 2295 1 772 1304 179 52 0 chrX 24629004 24629255 -142021041 + L1VL1 LINE L1 3 266 -6156 1 772 27420 108 16 52 chrX 24629255 24632687 -142017609 + L1Md_F2 LINE L1 277 3463 -2420 1 772 1136 90 73 0 chrX 24632687 24632865 -142017431 + B2_Mm2 SINE B2 5 195 0 1 772 27420 87 7 63 chrX 24632865 24634983 -142015313 + L1Md_F2 LINE L1 3464 5585 -298 1 772 7645 70 6 0 chrX 24634984 24635973 -142014323 + L1Md_F2 LINE L1 5587 6581 -1 1 772 3605 79 8 30 chrX 24635973 24636795 -142013501 + L1Md_A LINE L1 969 1759 -4124 1 772 812 120 35 21 chrX 24636799 24636944 -142013352 - L1_Mus1 LINE L1 0 6567 6421 1 772 305 307 56 70 chrX 24637223 24637507 -142012789 - RMER17C LTR ERVK -48 362 83 1 772 5271 123 71 29 chrX 24637959 24638880 -142011416 + Lx3A LINE L1 6016 6974 -7 1 772 228 362 28 21 chrX 24640218 24640359 -142009937 + L2 LINE L2 1518 1659 -1760 1 772 549 339 40 15 chrX 24640830 24641037 -142009259 - B4A SINE B4 -2 290 83 1 772 228 86 0 0 chrX 24641083 24641118 -142009178 + (TGG)n Simple_repeat Simple_repeat 1 35 0 1 772 334 332 111 34 chrX 24641214 24641448 -142008848 + L2 LINE L2 2049 2300 -1119 1 96 4599 132 15 18 chrX 24641453 24642247 -142008049 + YREP_Mm Unknown Unknown 986 1777 -35 1 773 427 291 10 0 chrX 24643089 24643192 -142007104 + B3 SINE B2 98 201 -15 1 773 379 283 67 0 chrX 24643252 24643372 -142006924 + B1F SINE Alu 21 148 -1 1 773 627 205 34 0 chrX 24643518 24643635 -142006661 + B3 SINE B2 1 121 -95 1 773 573 382 42 18 chrX 24693635 24693968 -141956328 - RMER1C Other Other -481 861 521 1 773 227 390 0 0 chrX 24694220 24694320 -141955976 - RMER1C Other Other -571 771 672 1 773 387 423 26 26 chrX 24694448 24695122 -141955174 - RMER1C Other Other -457 885 487 1 773 3587 164 9 5 chrX 24696561 24697209 -141953087 + L1Md_F2 LINE L1 441 1091 -5633 1 773 21013 75 149 2 chrX 24697207 24700354 -141949942 + L1Md_F2 LINE L1 1977 5585 -298 1 773 7548 70 1 3 chrX 24700355 24701341 -141948955 + L1Md_F2 LINE L1 5587 6570 -12 1 773 4001 76 0 0 chrX 24701343 24702181 -141948115 + L1Md_Gf LINE L1 828 1762 -4124 1 773 799 120 34 27 chrX 24702185 24702331 -141947965 - L1_Mus1 LINE L1 0 6567 6421 1 773 318 313 53 67 chrX 24702610 24702894 -141947402 - RMER17C LTR ERVK -48 362 83 1 773 5714 134 7 28 chrX 24703358 24704325 -141945971 + Lx3A LINE L1 6028 6974 -7 1 773 201 320 80 56 chrX 24705641 24705803 -141944493 + L2 LINE L2 1494 1659 -1760 1 773 181 347 52 10 chrX 24706166 24706262 -141944034 + L2 LINE L2 1926 2025 -1394 1 773 562 326 40 18 chrX 24706276 24706493 -141943803 - B4A SINE B4 -2 290 75 1 773 228 86 0 0 chrX 24706529 24706564 -141943732 + (TGG)n Simple_repeat Simple_repeat 1 35 0 1 773 322 315 155 69 chrX 24706660 24706892 -141943404 + L2 LINE L2 2049 2300 -1119 1 773 4566 133 12 19 chrX 24706897 24707694 -141942602 + YREP_Mm Unknown Unknown 986 1777 -35 1 773 464 279 0 0 chrX 24708535 24708639 -141941657 + B3 SINE B2 98 201 -15 1 773 384 252 75 8 chrX 24708699 24708819 -141941477 + B1F SINE Alu 21 148 -1 1 773 947 232 19 0 chrX 24708965 24709172 -141941124 + B3 SINE B2 1 211 -5 1 773 675 308 95 37 chrX 24709406 24709679 -141940617 + B4A SINE B4 4 292 0 1 773 13591 186 77 63 chrX 24709805 24712513 -141937783 + L1VL2 LINE L1 300 2799 -3087 1 773 970 104 0 0 chrX 24712513 24712647 -141937649 + B1_Mus2 SINE Alu 1 134 -13 1 773 13591 178 84 61 chrX 24712647 24714458 -141935838 + L1VL2 LINE L1 2800 4759 -1127 1 773 5152 144 20 1 chrX 24714459 24715309 -141934987 + Lx LINE L1 5787 6652 -2 1 773 21 89 0 0 chrX 24715373 24715429 -141934867 + AT_rich Low_complexity Low_complexity 1 56 0 1 773 22 70 0 0 chrX 24715636 24715679 -141934617 + AT_rich Low_complexity Low_complexity 1 43 0 1 773 951 26 0 0 chrX 24716608 24716722 -141933574 + (TC)n Simple_repeat Simple_repeat 2 115 0 1 773 201 39 0 0 chrX 24716723 24716749 -141933547 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 773 269 269 95 69 chrX 24717069 24717185 -141933111 + B1F SINE Alu 29 147 -2 1 773 2976 6 0 0 chrX 24717203 24717532 -141932764 - L1Md_A LINE L1 -259 5624 5296 1 773 8283 6 0 6 chrX 24717532 24718469 -141931827 + L1Md_A LINE L1 5652 6582 0 1 773 248 292 101 28 chrX 24718477 24718586 -141931710 + B1F SINE Alu 1 117 -32 1 773 757 294 39 24 chrX 24719361 24719567 -141930729 - B3 SINE B2 -6 210 2 1 773 991 112 7 0 chrX 24719822 24719965 -141930331 - B1_Mus1 SINE Alu -1 147 4 1 773 368 261 160 10 chrX 24719966 24720166 -141930130 - B4A SINE B4 -62 230 1 1 773 225 0 0 0 chrX 24720423 24720448 -141929848 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1 773 21 36 0 0 chrX 24720811 24720839 -141929457 + AT_rich Low_complexity Low_complexity 1 28 0 1 773 295 339 49 8 chrX 24721087 24721209 -141929087 - B1F SINE Alu -3 146 20 1 773 23676 149 6 2 chrX 24721459 24726601 -141923695 + L1_Mus3 LINE L1 1445 6607 -31 1 773 208 147 0 0 chrX 24727006 24727040 -141923256 + (A)n Simple_repeat Simple_repeat 1 34 0 1 773 429 222 0 0 chrX 24727240 24727339 -141922957 + (TA)n Simple_repeat Simple_repeat 2 100 0 1 773 267 350 20 10 chrX 24727914 24728015 -141922281 + PB1D10 SINE Alu 1 102 -15 1 773 239 352 22 11 chrX 24728919 24729008 -141921288 - B3 SINE B2 -14 202 113 1 773 479 298 65 13 chrX 24729093 24729246 -141921050 - B3 SINE B2 -53 163 3 1 773 459 0 0 0 chrX 24729330 24729381 -141920915 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 773 6569 108 25 11 chrX 24729501 24731279 -141919017 - L1_Mus1 LINE L1 0 6567 4778 1 773 6952 78 5 10 chrX 24731272 24732438 -141917858 - L1Md_F2 LINE L1 -15 6567 5405 1 773 16480 159 13 17 chrX 24732436 24735765 -141914531 - L1_Mus1 LINE L1 -1075 4808 1492 1 773 6164 161 24 16 chrX 24735763 24737103 -141913193 - L1_Mus3 LINE L1 -690 5948 4601 1 773 584 198 9 0 chrX 24737102 24737213 -141913083 - Lx4A LINE L1 -228 6830 6719 1 773 1916 260 69 13 chrX 24738072 24738683 -141911613 - Lx2B LINE L1 -14 6986 6342 1 773 2903 158 65 15 chrX 24738680 24738840 -141911456 + Lx6 LINE L1 4537 4730 -1147 1 773 216 0 0 0 chrX 24738840 24738864 -141911432 + (TAA)n Simple_repeat Simple_repeat 1 24 0 1 773 2903 158 65 15 chrX 24738864 24739314 -141910982 + Lx6 LINE L1 4731 5178 -699 1 773 448 176 0 36 chrX 24739487 24739599 -141910697 - URR1B DNA MER1_type 0 225 118 1 773 359 284 71 47 chrX 24739927 24740097 -141910199 + RLTR1B LTR ERV1 166 339 -173 1 773 8032 33 1 0 chrX 24740268 24741577 -141908719 - L1Md_A LINE L1 -1 6581 5272 1 773 642 171 0 8 chrX 24741576 24741700 -141908596 + L1_Mus3 LINE L1 5978 6100 -538 1 773 2561 76 0 3 chrX 24741700 24742042 -141908254 + ORR1A1 LTR MaLR 1 341 -5 2 773 3079 146 25 8 chrX 24742047 24742573 -141907723 + L1_Mus3 LINE L1 6096 6630 -8 1 773 1035 196 28 7 chrX 24742574 24742857 -141907439 + L1_Mur3 LINE L1 2999 3287 -2593 2 773 1487 271 21 26 chrX 24742864 24743160 -141907136 + Lx6 LINE L1 5607 5903 -1557 1 773 1938 205 17 17 chrX 24743160 24743581 -141906715 + MTC LTR MaLR 1 421 0 2 773 1487 271 21 26 chrX 24743581 24743815 -141906481 + Lx6 LINE L1 5904 6134 -1326 1 773 2650 63 25 6 chrX 24744086 24744439 -141905857 + L1Md_F2 LINE L1 6214 6573 -9 2 773 1227 208 76 40 chrX 24744439 24744864 -141905432 + RLTR21 LTR ERVK 711 1254 -150 2 773 2957 86 7 2 chrX 24745102 24745520 -141904776 - BGLII LTR ERVK 0 421 2 2 773 2657 217 44 50 chrX 24745522 24746453 -141903843 - RMER3D-int LTR ERVK -1 2841 1917 2 773 2004 205 88 79 chrX 24746467 24746802 -141903494 - RMER3D-int LTR ERVK -1164 1678 1386 2 773 3349 38 2 0 chrX 24746802 24747197 -141903099 + MTA_Mm LTR MaLR 1 396 0 2 773 2004 205 88 79 chrX 24747197 24747518 -141902778 - RMER3D-int LTR ERVK -1457 1385 1016 2 773 458 148 75 25 chrX 24747564 24747724 -141902572 + CT-rich Low_complexity Low_complexity 3 170 0 2 773 490 233 70 39 chrX 24747786 24748088 -141902208 - RMER3D-int LTR ERVK -2038 804 354 2 773 605 207 25 40 chrX 24748154 24748355 -141901941 - RMER3D-int LTR ERVK -1993 849 652 2 773 443 145 0 0 chrX 24748370 24748458 -141901838 - RMER3D-int LTR ERVK -2278 564 489 2 773 1786 263 52 21 chrX 24748722 24749301 -141900995 - Lx7 LINE L1 -1042 6654 6058 2 773 636 258 51 29 chrX 24749339 24749614 -141900682 - Lx7 LINE L1 -1559 6137 5857 2 773 600 269 39 78 chrX 24749910 24750116 -141900180 + B3A SINE B2 1 198 0 2 773 324 70 0 0 chrX 24750178 24750221 -141900075 + (GGAA)n Simple_repeat Simple_repeat 3 45 0 2 773 838 294 0 0 chrX 24750299 24750503 -141899793 - B3 SINE B2 -12 204 1 2 773 992 277 84 0 chrX 24750923 24751219 -141899077 - MER2 DNA MER2_type -24 321 1 2 773 832 177 61 14 chrX 24751378 24751590 -141898706 + L1_Mm LINE L1 5230 5451 -432 2 773 2005 245 57 52 chrX 24751636 24752755 -141897541 + L1_Mus1 LINE L1 261 1205 -5433 2 773 24812 125 10 62 chrX 24752752 24758607 -141891689 + L1_Mus1 LINE L1 1071 6565 -2 2 773 4355 166 19 4 chrX 24758618 24759439 -141890857 + Lx2 LINE L1 5813 6646 -351 2 773 1212 160 14 0 chrX 24759433 24759652 -141890644 + Lx2 LINE L1 6770 6991 -6 2 773 381 200 0 13 chrX 24759944 24760020 -141890276 - ID_B1 SINE B4 -2 222 148 2 773 507 33 0 0 chrX 24760023 24760084 -141890212 + (TA)n Simple_repeat Simple_repeat 2 62 0 2 773 315 252 56 46 chrX 24760084 24760112 -141890184 - B1F SINE Alu -85 64 39 2 773 5726 186 38 7 chrX 24760112 24761638 -141888658 - Lx3C LINE L1 -40 6936 5354 2 773 6712 177 32 10 chrX 24761651 24763092 -141887204 + Lx4A LINE L1 3725 5196 -681 2 773 4620 36 0 0 chrX 24763087 24763766 -141886530 - L1Md_T LINE L1 -595 5987 5309 2 773 581 64 0 0 chrX 24763761 24763839 -141886457 + L1Md_T LINE L1 5509 5586 -297 2 773 7866 39 39 0 chrX 24763840 24764798 -141885498 + L1Md_T LINE L1 5588 6582 0 2 773 5343 190 23 10 chrX 24764810 24766373 -141883923 + Lx4A LINE L1 5190 6779 -279 2 773 244 343 34 34 chrX 24766741 24766889 -141883407 - RMER1C Other Other -758 584 437 2 773 439 415 12 0 chrX 24767353 24767606 -141882690 - RMER1C Other Other -523 819 564 2 773 307 404 26 19 chrX 24767872 24768142 -141882154 - RMER1C Other Other -607 735 464 2 773 304 418 8 12 chrX 24768360 24768602 -141881694 - RMER1C Other Other -593 749 509 2 773 495 0 0 0 chrX 24769033 24769088 -141881208 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 773 275 415 19 27 chrX 24769296 24769657 -141880639 - RMER1C Other Other -536 806 378 2 773 258 405 31 31 chrX 24770294 24770485 -141879811 - RMER1C Other Other -585 757 567 2 773 236 387 48 41 chrX 24770817 24771229 -141879067 - RMER1C Other Other -478 864 450 2 773 474 18 0 0 chrX 24771483 24771538 -141878758 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 773 480 375 43 20 chrX 24772106 24772452 -141877844 - RMER1C Other Other -468 874 521 2 774 245 425 25 19 chrX 24772989 24773303 -141876993 - RMER1C Other Other -540 802 487 2 774 751 69 0 19 chrX 24774630 24774734 -141875562 + RLTR10 LTR ERVK 287 388 -2 2 774 7874 42 0 7 chrX 24774739 24775742 -141874554 + RLTR10-int LTR ERVK 3 998 -989 2 774 322 258 39 15 chrX 24775806 24775936 -141874360 + RLTR10-int LTR ERVK 1462 1594 -5987 2 774 8112 17 15 5 chrX 24776018 24777005 -141873291 + RLTR10-int LTR ERVK 990 1986 -1 2 774 2500 72 8 181 chrX 24777005 24777476 -141872820 + RLTR10 LTR ERVK 1 390 0 2 774 4174 193 21 4 chrX 24777893 24778737 -141871559 + L1Md_F2 LINE L1 233 1091 -5633 2 774 2704 97 0 0 chrX 24778735 24779128 -141871168 + L1Md_F2 LINE L1 1977 2369 -3514 2 774 20680 70 1 3 chrX 24779135 24781880 -141868416 + L1Md_F2 LINE L1 2845 5585 -298 2 774 7667 67 1 0 chrX 24781881 24782864 -141867432 + L1Md_F2 LINE L1 5587 6570 -12 2 774 3919 87 0 5 chrX 24782866 24783708 -141866588 + L1Md_Gf LINE L1 828 1762 -4124 2 774 779 141 7 14 chrX 24783712 24783856 -141866440 - L1Md_F2 LINE L1 -12 6570 6428 2 774 265 326 57 64 chrX 24784137 24784419 -141865877 - RMER17C LTR ERVK -48 362 83 2 774 5759 129 9 31 chrX 24784859 24785850 -141864446 + Lx3A LINE L1 6006 6974 -7 2 774 206 320 80 56 chrX 24787165 24787327 -141862969 + L2 LINE L2 1494 1659 -1760 2 774 181 347 52 10 chrX 24787690 24787786 -141862510 + L2 LINE L2 1926 2025 -1394 2 774 543 333 40 15 chrX 24787800 24788007 -141862289 - B4A SINE B4 -2 290 83 2 774 367 336 111 34 chrX 24788172 24788406 -141861890 + L2 LINE L2 2049 2300 -1119 2 774 4655 129 12 19 chrX 24788411 24789208 -141861088 + YREP_Mm Unknown Unknown 986 1777 -35 2 774 468 279 0 0 chrX 24790052 24790156 -141860140 + B3 SINE B2 98 201 -15 2 774 362 261 75 8 chrX 24790216 24790336 -141859960 + B1F SINE Alu 21 148 -1 2 774 924 237 19 0 chrX 24790482 24790689 -141859607 + B3 SINE B2 1 211 -5 2 774 563 319 95 37 chrX 24790923 24791196 -141859100 + B4A SINE B4 4 292 0 2 774 16851 177 35 61 chrX 24791312 24794016 -141856280 + L1VL2 LINE L1 300 2807 -3076 2 774 976 104 0 0 chrX 24794016 24794150 -141856146 + B1_Mus2 SINE Alu 1 134 -13 2 774 16851 163 17 58 chrX 24794150 24796194 -141854102 + L1VL2 LINE L1 2808 4756 -1127 2 774 5300 140 19 1 chrX 24796195 24797046 -141853250 + Lx LINE L1 5787 6652 -2 2 774 342 0 0 0 chrX 24798343 24798381 -141851915 + (TC)n Simple_repeat Simple_repeat 2 39 0 2 774 273 29 0 0 chrX 24798382 24798416 -141851880 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 774 24 0 0 0 chrX 24798694 24798718 -141851578 + AT_rich Low_complexity Low_complexity 1 24 0 2 774 249 278 134 60 chrX 24798718 24798852 -141851444 + B1F SINE Alu 4 147 -2 2 774 242 317 47 70 chrX 24798847 24798867 -141851429 + ID_B1 SINE B4 70 195 -29 2 774 272 264 101 28 chrX 24798867 24798976 -141851320 + B1F SINE Alu 1 117 -32 2 774 777 299 39 24 chrX 24799759 24799965 -141850331 - B3 SINE B2 -6 210 2 2 774 979 119 7 0 chrX 24800221 24800364 -141849932 - B1_Mus1 SINE Alu -1 147 4 2 774 341 267 160 10 chrX 24800365 24800565 -141849731 - B4A SINE B4 -62 230 1 2 774 253 296 127 0 chrX 24800834 24800905 -141849391 - ID4 SINE ID 0 83 4 2 774 21 36 0 0 chrX 24801203 24801231 -141849065 + AT_rich Low_complexity Low_complexity 1 28 0 2 774 311 331 49 8 chrX 24801479 24801601 -141848695 - B1F SINE Alu -3 146 20 2 774 24961 151 8 2 chrX 24801852 24807012 -141843284 + L1_Mus3 LINE L1 1445 6633 -5 2 774 23 54 0 0 chrX 24807434 24807471 -141842825 + AT_rich Low_complexity Low_complexity 1 37 0 2 774 301 235 19 67 chrX 24807583 24807688 -141842608 - HAL1-3A_ME LINE L1 -784 2074 1975 2 774 225 226 0 0 chrX 24807692 24807745 -141842551 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 774 283 295 36 0 chrX 24808314 24808415 -141841881 + B4A SINE B4 82 190 -102 2 774 242 352 22 11 chrX 24809326 24809415 -141840881 - B3 SINE B2 -14 202 113 2 774 227 242 14 83 chrX 24809419 24809491 -141840805 - B4A SINE B4 -139 153 87 2 774 471 298 65 13 chrX 24809500 24809653 -141840643 - B3 SINE B2 -53 163 3 2 774 366 23 0 0 chrX 24809737 24809780 -141840516 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 774 7272 98 7 2 chrX 24809896 24811659 -141838637 - L1_Mus1 LINE L1 0 6567 4796 2 774 18310 131 131 14 chrX 24811659 24816178 -141834118 - L1Md_F2 LINE L1 0 6582 1492 2 774 6653 158 28 12 chrX 24816176 24817508 -141832788 - L1_Mus3 LINE L1 -690 5948 4601 2 774 610 198 9 0 chrX 24817507 24817618 -141832678 - Lx4A LINE L1 -228 6830 6719 2 774 3134 26 2 37 chrX 24817792 24818193 -141832103 + RLTR10 LTR ERVK 1 387 -3 2 774 17173 19 1 1 chrX 24818208 24820154 -141830142 + RLTR10-int LTR ERVK 41 1986 -1 2 774 3073 39 2 37 chrX 24820154 24820555 -141829741 + RLTR10 LTR ERVK 1 387 -3 2 774 2241 257 68 3 chrX 24821254 24821860 -141828436 - Lx2B LINE L1 -14 6986 6342 2 774 3082 159 65 16 chrX 24821857 24822018 -141828278 + L1_Mur2 LINE L1 4537 4730 -1147 2 774 216 0 0 0 chrX 24822018 24822042 -141828254 + (TAA)n Simple_repeat Simple_repeat 1 24 0 2 774 3082 159 65 16 chrX 24822042 24822492 -141827804 + L1_Mur2 LINE L1 4731 5178 -699 2 774 409 182 22 11 chrX 24822665 24822754 -141827542 - URR1B DNA MER1_type 0 225 136 2 774 24 32 0 0 chrX 24822858 24822889 -141827407 + AT_rich Low_complexity Low_complexity 1 31 0 2 774 3039 242 21 11 chrX 24823029 24824020 -141826276 - Lx6 LINE L1 -1352 6108 5105 2 774 1182 223 37 9 chrX 24824025 24824351 -141825945 - Lx6 LINE L1 -2035 3845 3511 2 774 636 239 72 38 chrX 24824351 24824513 -141825783 - Lx6 LINE L1 -3397 2480 2324 2 774 651 26 0 0 chrX 24824513 24824590 -141825706 + (TC)n Simple_repeat Simple_repeat 2 78 0 2 774 636 239 72 38 chrX 24824590 24824636 -141825660 - Lx6 LINE L1 -3554 2323 2267 2 774 638 315 51 18 chrX 24824642 24824859 -141825437 - ORR1D2 LTR MaLR -145 225 2 2 774 389 399 8 4 chrX 24824862 24825096 -141825200 + Lx8 LINE L1 6956 7190 -283 2 774 1010 288 42 17 chrX 24825203 24825563 -141824733 + ORR1D2 LTR MaLR 1 369 -1 2 774 496 256 8 8 chrX 24825718 24825840 -141824456 + Lx8 LINE L1 6640 6761 -712 2 774 225 256 12 25 chrX 24826107 24826187 -141824109 - Lx9 LINE L1 -1398 6246 6168 2 774 262 445 0 0 chrX 24826241 24826378 -141823918 + RMER1C Other Other 536 672 -670 2 774 340 424 16 31 chrX 24826712 24827150 -141823146 + RMER1C Other Other 401 871 -471 2 774 309 0 47 47 chrX 24827580 24827644 -141822652 + (CAAAAA)n Simple_repeat Simple_repeat 3 66 0 2 774 275 350 82 18 chrX 24827764 24827929 -141822367 + RMER1C Other Other 488 639 -703 2 774 10902 70 5 0 chrX 24828431 24829154 -141821142 - L1Md_A LINE L1 -3185 2698 1976 2 774 201 39 0 0 chrX 24829154 24829180 -141821116 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 774 10902 127 10 22 chrX 24829180 24830943 -141819353 - L1Md_A LINE L1 -3908 1975 233 2 774 492 68 0 0 chrX 24832092 24832165 -141818131 + (A)n Simple_repeat Simple_repeat 1 73 0 2 774 387 418 32 29 chrX 24832455 24833100 -141817196 + RMER1C Other Other 390 877 -465 2 774 375 405 38 30 chrX 24833604 24834406 -141815890 + RMER1C Other Other 373 882 -460 2 774 522 0 0 0 chrX 24834520 24834578 -141815718 + (TA)n Simple_repeat Simple_repeat 1 58 0 2 774 273 429 29 26 chrX 24834941 24835362 -141814934 + RMER1C Other Other 412 833 -509 3 774 269 384 37 17 chrX 24835591 24835786 -141814510 + RMER1C Other Other 419 757 -585 3 774 298 417 32 35 chrX 24836614 24836959 -141813337 + RMER1C Other Other 494 837 -505 3 774 286 423 8 12 chrX 24837429 24837671 -141812625 + RMER1C Other Other 509 749 -593 3 774 263 401 26 22 chrX 24837890 24838117 -141812179 + RMER1C Other Other 464 691 -651 3 774 264 436 16 4 chrX 24838434 24838678 -141811618 + RMER1C Other Other 499 745 -597 3 774 318 388 21 26 chrX 24838878 24839288 -141811008 + RMER1C Other Other 466 865 -477 3 774 9884 185 29 8 chrX 24839654 24842638 -141807658 - Lx4A LINE L1 -279 6779 3725 3 774 5988 190 42 9 chrX 24842650 24844217 -141806079 + Lx3C LINE L1 5353 6964 -12 3 774 1030 174 0 0 chrX 24844227 24844411 -141805885 - Lx2 LINE L1 -39 6958 6775 3 774 4206 172 20 4 chrX 24844409 24845220 -141805076 - Lx2 LINE L1 -352 6645 5822 3 774 4474 100 5 5 chrX 24845232 24845876 -141804420 - L1_Mus1 LINE L1 0 6567 5924 3 774 34847 32 2 8 chrX 24845876 24851280 -141799016 + L1Md_T LINE L1 215 5587 -296 3 774 8139 48 0 0 chrX 24851281 24852275 -141798021 + L1Md_T LINE L1 5589 6582 0 3 774 25071 130 8 63 chrX 24852288 24857477 -141792819 - L1_Mus1 LINE L1 -630 5937 1085 3 774 280 261 6 107 chrX 24857475 24857634 -141792662 - L1_Mus1 LINE L1 -6043 595 453 3 774 827 163 68 15 chrX 24857668 24857874 -141792422 - L1_Mm LINE L1 -432 5451 5235 3 774 982 280 84 0 chrX 24858036 24858332 -141791964 + MER2 DNA MER2_type 1 321 -24 3 774 811 293 0 0 chrX 24858742 24858947 -141791349 + B3 SINE B2 1 205 -11 3 774 711 52 0 0 chrX 24859029 24859125 -141791171 + (TTCC)n Simple_repeat Simple_repeat 3 98 0 3 774 624 277 51 6 chrX 24859216 24859394 -141790902 - B3A SINE B2 -12 186 1 3 774 400 93 0 26 chrX 24859639 24859716 -141790580 + (TA)n Simple_repeat Simple_repeat 2 76 0 3 774 905 235 41 183 chrX 24859721 24860361 -141789935 + Lx7 LINE L1 5852 6400 -1296 3 774 2345 107 153 0 chrX 24860387 24860799 -141789497 - IAPLTR2_Mm LTR ERVK 0 475 1 3 774 5677 46 4 19 chrX 24860799 24861556 -141788740 - IAPEz-int LTR ERVK 0 6481 5736 3 774 2085 72 0 0 chrX 24861555 24861833 -141788463 - IAPEz-int LTR ERVK -4845 1636 1359 3 774 3670 57 2 18 chrX 24861833 24862336 -141787960 - IAPEz-int LTR ERVK -5819 662 168 3 774 250 302 0 0 chrX 24862336 24862389 -141787907 - RLTR27 LTR ERVK -34 275 223 3 774 963 87 10 104 chrX 24862389 24862581 -141787715 - IAPEz-int LTR ERVK -6286 195 22 3 774 2365 104 153 0 chrX 24862649 24863061 -141787235 - IAPLTR2_Mm LTR ERVK 0 475 1 3 774 797 306 8 19 chrX 24863062 24863322 -141786974 + Lx7 LINE L1 6398 6654 -1042 3 774 434 159 0 0 chrX 24863586 24863674 -141786622 + RMER3D-int LTR ERVK 489 564 -2278 3 774 550 223 25 40 chrX 24863689 24863890 -141786406 + RMER3D-int LTR ERVK 652 849 -1993 3 774 495 236 36 37 chrX 24863976 24864311 -141785985 + RMER3D-int LTR ERVK 359 804 -2038 3 774 486 85 82 41 chrX 24864322 24864469 -141785827 + GA-rich Low_complexity Low_complexity 3 155 0 3 774 2090 195 90 82 chrX 24864514 24864834 -141785462 + RMER3D-int LTR ERVK 1014 1383 -1459 3 774 3163 53 2 10 chrX 24864834 24865233 -141785063 - MTA_Mm LTR MaLR 0 396 1 3 774 2090 195 90 82 chrX 24865233 24865587 -141784709 + RMER3D-int LTR ERVK 1384 1694 -1148 3 774 2613 204 115 12 chrX 24865590 24866514 -141783782 + MYSERV16_I-int LTR ERVK 1308 2326 0 3 774 2769 97 19 2 chrX 24866514 24866928 -141783368 + BGLII LTR ERVK 1 421 0 3 774 1246 201 84 57 chrX 24867167 24867597 -141782699 - RLTR21 LTR ERVK -150 1254 706 3 774 11019 93 4 1 chrX 24867597 24869925 -141780371 - L1Md_F2 LINE L1 -13 6569 4237 3 774 12753 114 5 25 chrX 24869921 24872718 -141777578 - L1Md_F2 LINE L1 -2718 3165 446 3 774 824 148 11 56 chrX 24872721 24872900 -141777396 - RLTR21 LTR ERVK -855 717 547 3 774 270 0 0 0 chrX 24872907 24872937 -141777359 + (A)n Simple_repeat Simple_repeat 1 30 0 3 774 1404 242 18 39 chrX 24872954 24873285 -141777011 - RLTR21 LTR ERVK -1248 324 1 3 774 289 250 17 35 chrX 24873668 24873784 -141776512 - Lx6 LINE L1 -15 7445 7332 3 774 1493 269 21 26 chrX 24873784 24874018 -141776278 - Lx6 LINE L1 -1326 6134 5904 3 774 2034 201 17 14 chrX 24874018 24874438 -141775858 - MTC LTR MaLR 0 421 1 3 774 1493 269 21 26 chrX 24874438 24874734 -141775562 - Lx6 LINE L1 -1557 5903 5607 3 774 1067 196 28 3 chrX 24874741 24875023 -141775273 - L1_Mur3 LINE L1 -2593 3287 2999 3 774 3530 159 18 21 chrX 24875024 24875555 -141774741 - L1_Mus3 LINE L1 -7 6631 6101 3 774 2460 65 62 3 chrX 24875555 24875878 -141774418 - ORR1A1 LTR MaLR -4 342 1 3 774 3530 159 18 21 chrX 24875878 24876002 -141774294 - L1_Mus3 LINE L1 -538 6100 5978 3 774 2112 58 57 10 chrX 24876002 24876301 -141773995 + L1Md_F2 LINE L1 5273 5585 -298 3 774 7072 84 5 14 chrX 24876302 24877304 -141772992 + L1Md_F2 LINE L1 5587 6579 -3 3 774 242 161 35 35 chrX 24878631 24878689 -141771607 + GA-rich Low_complexity Low_complexity 2 59 0 3 774 378 248 30 40 chrX 24878848 24878998 -141771298 - L1_Rod LINE L1 -306 5580 5396 3 774 2123 209 80 38 chrX 24879017 24879568 -141770728 + RLTR31A_Mm LTR ERVK 11 584 0 3 774 261 150 126 29 chrX 24879568 24879671 -141770625 - L1_Rod LINE L1 -475 5372 5260 3 774 798 163 6 64 chrX 24879809 24879966 -141770330 - B1_Mus1 SINE Alu 0 148 1 3 774 2807 337 32 36 chrX 24880404 24880697 -141769599 - RodERV21-int LTR ERV1 -197 4794 4501 3 774 2527 121 35 58 chrX 24880697 24881127 -141769169 - RLTR9B2 LTR ERVK 0 420 1 3 774 2807 337 32 36 chrX 24881127 24882732 -141767564 - RodERV21-int LTR ERV1 -491 4500 2905 3 774 737 192 0 74 chrX 24883200 24883363 -141766933 + LSU-rRNA_Hsa rRNA rRNA 3514 3664 -1371 3 774 523 139 111 17 chrX 24883363 24883480 -141766816 - MuRRS4-int LTR ERV1 -4186 877 750 3 774 339 209 20 71 chrX 24883466 24883564 -141766732 - RMER16-int LTR ERVK -3960 1446 1354 3 774 3993 134 26 3 chrX 24883669 24884348 -141765948 - RMER16-int LTR ERVK -4045 1361 667 3 774 1126 235 65 22 chrX 24884370 24884692 -141765604 - MuRRS4-int LTR ERV1 -4388 675 340 3 774 535 243 60 86 chrX 24885036 24885586 -141764710 - MuRRS4-int LTR ERV1 -4565 498 5 3 774 731 276 69 40 chrX 24885588 24885864 -141764432 - LTRIS4 LTR ERV1 0 507 224 3 774 234 0 0 0 chrX 24886466 24886492 -141763804 + (A)n Simple_repeat Simple_repeat 1 26 0 3 774 352 281 6 53 chrX 24886795 24886964 -141763332 - RodERV21-int LTR ERV1 -3188 3903 3743 3 774 1216 281 14 49 chrX 24887246 24887676 -141762620 - RodERV21-int LTR ERV1 -2273 2718 2304 3 774 4677 101 23 0 chrX 24887681 24888346 -141761950 - L1_Mus3 LINE L1 -247 6391 5712 3 774 1478 155 0 0 chrX 24888348 24888574 -141761722 + L1_Mus3 LINE L1 5473 5698 -185 3 774 1755 174 9 21 chrX 24888574 24888903 -141761393 - RLTR14 LTR ERV1 -51 331 7 3 774 512 194 0 11 chrX 24888928 24889022 -141761274 - RLTR14-int LTR ERV1 -5 5312 5220 3 774 1675 175 118 3 chrX 24889045 24889401 -141760895 - RLTR14-int LTR ERV1 -205 5112 4716 3 774 1888 118 27 66 chrX 24889401 24889736 -141760560 - RLTRETN_Mm LTR ERVK 0 322 1 3 774 10543 157 56 53 chrX 24889737 24893133 -141757163 - MMETn-int LTR ERVK -4 4840 1 3 774 251 242 45 116 chrX 24893138 24893250 -141757046 - RLTRETN_Mm LTR ERVK 0 420 304 3 774 31175 82 31 4 chrX 24893250 24898153 -141752143 - L1Md_F LINE L1 -532 5351 315 3 774 6798 92 12 8 chrX 24898154 24899086 -141751210 - L1Md_F LINE L1 -5494 1025 90 3 774 362 176 286 0 chrX 24899138 24899229 -141751067 + MMETn-int LTR ERVK 2473 2546 -2298 3 774 4676 67 2 9 chrX 24899229 24899830 -141750466 + L1Md_F2 LINE L1 5954 6554 -28 3 774 3899 39 5 0 chrX 24899830 24900271 -141750025 + L1Md_T LINE L1 6140 6582 0 3 774 203 0 0 36 chrX 24900298 24900326 -141749970 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 774 3087 185 16 41 chrX 24900328 24901243 -141749053 + MMETn-int LTR ERVK 2541 3719 -1125 3 774 779 195 0 0 chrX 24901238 24901361 -141748935 + MMETn-int LTR ERVK 6539 6661 -745 3 774 3456 205 50 18 chrX 24901392 24902133 -141748163 - RLTR14-int LTR ERV1 -2117 3200 2436 3 96 2002 234 148 35 chrX 24903588 24904085 -141746211 + RLTR40 LTR ERVK 22 571 -246 3 775 890 107 7 0 chrX 24904085 24904235 -141746061 + (GA)n Simple_repeat Simple_repeat 2 152 0 3 775 2002 234 148 35 chrX 24904235 24904389 -141745907 + RLTR40 LTR ERVK 572 752 -65 3 775 6691 87 31 2 chrX 24904389 24904805 -141745491 - RLTR13B1 LTR ERVK 0 893 476 3 775 378 42 0 0 chrX 24904805 24904853 -141745443 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 775 6691 87 31 2 chrX 24904853 24905304 -141744992 - RLTR13B1 LTR ERVK -418 475 3 3 775 2002 234 148 35 chrX 24905304 24905359 -141744937 + RLTR40 LTR ERVK 753 809 -8 3 775 369 0 0 0 chrX 24905557 24905598 -141744698 + (TAA)n Simple_repeat Simple_repeat 2 42 0 3 775 710 239 68 11 chrX 24907130 24907320 -141742976 - Lx9 LINE L1 -243 7401 7201 3 775 354 242 0 0 chrX 24907318 24907409 -141742887 + Lx9 LINE L1 7552 7642 -2 3 775 509 275 14 7 chrX 24907413 24907556 -141742740 + Lx5 LINE L1 6825 6968 -82 3 775 213 39 0 0 chrX 24907571 24907597 -141742699 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 3 775 667 225 35 14 chrX 24907609 24907753 -141742543 + B1_Mur2 SINE Alu 1 147 -2 3 775 2088 162 31 0 chrX 24907761 24908120 -141742176 + L1_Mus3 LINE L1 6261 6630 -8 3 775 27 49 0 0 chrX 24908133 24908174 -141742122 + AT_rich Low_complexity Low_complexity 1 41 0 3 775 226 204 0 69 chrX 24908242 24908300 -141741996 + A-rich Low_complexity Low_complexity 4 57 0 3 775 791 261 19 14 chrX 24908308 24908522 -141741774 + Lx4B LINE L1 6809 7023 -35 3 775 2901 186 32 2 chrX 24908558 24909150 -141741146 - L1_Mur2 LINE L1 -1176 4701 4092 3 775 9915 142 39 25 chrX 24909150 24910524 -141739772 - RLTR22_Mur LTR ERVK 0 1848 461 3 775 364 62 0 30 chrX 24910524 24910590 -141739706 + (TAG)n Simple_repeat Simple_repeat 3 66 0 3 775 9915 142 39 25 chrX 24910590 24911037 -141739259 - RLTR22_Mur LTR ERVK -1388 460 3 3 775 847 173 198 0 chrX 24911037 24911280 -141739016 - L1_Mur2 LINE L1 -1782 4095 3805 3 775 1506 136 16 4 chrX 24911322 24911565 -141738731 + L1_Mus4 LINE L1 6391 6636 0 3 775 225 0 0 0 chrX 24912054 24912079 -141738217 + (CAAAG)n Simple_repeat Simple_repeat 3 27 0 3 775 24 0 0 0 chrX 24913476 24913500 -141736796 + AT_rich Low_complexity Low_complexity 1 24 0 3 775 398 269 22 7 chrX 24913784 24913919 -141736377 + L1_Mur2 LINE L1 4334 4470 -1407 3 775 931 304 51 33 chrX 24913924 24914358 -141735938 + Lx6 LINE L1 6506 7296 -164 3 775 1673 190 20 90 chrX 24914333 24914789 -141735507 - L1_Mur2 LINE L1 -2134 3743 3320 3 775 1315 57 0 0 chrX 24914791 24914949 -141735347 - L1_Mus1 LINE L1 0 6567 6410 3 775 22233 127 10 5 chrX 24914949 24917939 -141732357 - L1_Mus1 LINE L1 -431 6136 3134 3 775 207 0 0 0 chrX 24917939 24917962 -141732334 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 775 22233 137 8 5 chrX 24917962 24918800 -141731496 - L1_Mus1 LINE L1 -2750 3133 2295 3 775 1388 183 52 0 chrX 24918801 24919052 -141731244 + L1VL1 LINE L1 3 266 -6156 3 775 5155 136 29 13 chrX 24919052 24920747 -141729549 + L1Md_F LINE L1 277 1998 -3885 3 775 36711 40 5 7 chrX 24920746 24926346 -141723950 + L1Md_T LINE L1 2 5586 -297 3 775 8281 42 40 0 chrX 24926346 24927303 -141722993 + L1Md_T LINE L1 5587 6581 -1 3 775 27422 92 2 31 chrX 24927304 24928779 -141721517 + L1Md_F2 LINE L1 1987 3462 -2421 3 775 1340 88 55 0 chrX 24928779 24928961 -141721335 + B2_Mm2 SINE B2 4 195 0 3 775 27422 86 2 27 chrX 24928961 24931627 -141718669 + L1Md_F2 LINE L1 3463 6015 -567 3 775 2038 145 29 6 chrX 24931627 24931974 -141718322 - ETnERV2-int LTR ERVK -3611 3795 3441 3 775 809 166 12 58 chrX 24932199 24932372 -141717924 - ETnERV2-int LTR ERVK -2654 2190 2026 3 775 594 82 0 0 chrX 24932380 24932453 -141717843 + L1Md_F2 LINE L1 5513 5585 -298 3 775 8325 60 1 2 chrX 24932454 24933438 -141716858 + L1Md_F2 LINE L1 5587 6569 -13 3 775 2813 173 42 31 chrX 24933439 24934091 -141716205 - ETnERV2-int LTR ERVK -4271 3135 1934 3 775 1548 162 17 17 chrX 24934112 24934401 -141715895 - ETnERV2-int LTR ERVK -5318 2088 1800 3 775 1453 274 34 7 chrX 24934646 24935061 -141715235 + MuRRS4-int LTR ERV1 1019 1444 -3619 3 775 355 244 52 104 chrX 24935083 24935122 -141715174 + MuRRS4-int LTR ERV1 1610 1648 -3042 3 775 555 29 0 0 chrX 24935122 24935191 -141715105 + (GA)n Simple_repeat Simple_repeat 1 69 0 3 775 5302 154 65 24 chrX 24935191 24937422 -141712874 + MuRRS4-int LTR ERV1 1172 4271 -792 3 775 771 210 0 6 chrX 24937413 24937571 -141712725 + MuRRS4-int LTR ERV1 4788 4944 -119 3 775 1159 281 0 6 chrX 24937562 24937874 -141712422 + MuRRS4-int LTR ERV1 4636 4945 -118 3 775 3511 330 34 42 chrX 24938446 24940057 -141710239 + RodERV21-int LTR ERV1 2905 4500 -491 3 775 2663 112 40 61 chrX 24940057 24940484 -141709812 + RLTR9B2 LTR ERVK 3 420 0 3 775 3511 330 34 42 chrX 24940484 24940776 -141709520 + RodERV21-int LTR ERV1 4501 4793 -198 3 775 231 310 71 79 chrX 24940832 24940958 -141709338 + RMER4B LTR ERVK 347 471 -114 3 775 875 134 0 72 chrX 24941223 24941376 -141708920 + B1_Mus1 SINE Alu 7 148 0 3 775 889 266 38 65 chrX 24941454 24942115 -141708181 + L1_Mus1 LINE L1 217 1040 -5684 3 775 16826 49 2 10 chrX 24942113 24944283 -141706013 + L1_Mm LINE L1 1367 3519 -2364 3 775 7326 41 2 0 chrX 24944278 24945345 -141704951 - L1_Mm LINE L1 -1599 4284 2376 4 775 959 258 86 0 chrX 24945345 24945613 -141704683 - MER2 DNA MER2_type -47 298 8 4 775 919 164 62 19 chrX 24945780 24945991 -141704305 + L1_Mm LINE L1 5234 5453 -430 4 775 2180 251 54 61 chrX 24946035 24947156 -141703140 + L1Md_F LINE L1 120 1108 -5433 4 775 25811 127 13 58 chrX 24947153 24952958 -141697338 + L1_Mus1 LINE L1 1071 6566 -1 3 775 4525 174 17 5 chrX 24952970 24953783 -141696513 + Lx2 LINE L1 5823 6645 -352 4 775 1225 179 18 0 chrX 24953778 24953996 -141696300 + Lx2 LINE L1 6770 6991 -6 4 775 385 235 40 10 chrX 24954289 24954388 -141695908 - ID_B1 SINE B4 -2 222 121 4 775 6265 187 43 10 chrX 24954390 24955917 -141694379 - Lx3C LINE L1 -51 6925 5354 4 775 10379 186 29 15 chrX 24955930 24958935 -141691361 + Lx4A LINE L1 3725 6779 -279 4 775 363 387 33 30 chrX 24959301 24959818 -141690478 - RMER1C Other Other -477 865 362 4 775 424 427 12 0 chrX 24959913 24960161 -141690135 - RMER1C Other Other -671 671 421 4 775 460 380 30 23 chrX 24960437 24960701 -141689595 - RMER1C Other Other -613 729 464 4 775 427 427 14 24 chrX 24960796 24961321 -141688975 - RMER1C Other Other -471 871 509 4 775 369 426 37 47 chrX 24961633 24962175 -141688121 - RMER1C Other Other -505 837 379 4 775 311 394 36 36 chrX 24962809 24963004 -141687292 - RMER1C Other Other -581 761 567 4 775 407 421 36 32 chrX 24963119 24963763 -141686533 - RMER1C Other Other -461 881 379 4 775 405 0 0 0 chrX 24964018 24964063 -141686233 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 775 662 395 32 22 chrX 24964196 24964998 -141685298 - RMER1C Other Other -460 882 375 4 775 234 389 79 20 chrX 24965185 24965337 -141684959 - RMER1C Other Other -642 700 540 4 775 386 422 24 24 chrX 24965478 24966152 -141684144 - RMER1C Other Other -457 885 487 4 775 244 438 12 32 chrX 24966517 24966861 -141683435 - RMER1C Other Other -625 717 381 4 775 3519 171 9 5 chrX 24967586 24968234 -141682062 + L1Md_F2 LINE L1 441 1091 -5633 4 775 2652 102 0 2 chrX 24968232 24968627 -141681669 + L1Md_F2 LINE L1 1977 2370 -3513 4 775 20452 72 0 1 chrX 24968638 24971375 -141678921 + L1Md_F2 LINE L1 2850 5585 -298 4 775 7830 58 4 2 chrX 24971376 24972369 -141677927 + L1Md_F2 LINE L1 5587 6581 -1 4 775 4032 80 1 0 chrX 24972369 24973201 -141677095 + L1Md_Gf LINE L1 833 1762 -4124 4 775 871 113 7 14 chrX 24973205 24973349 -141676947 - L1Md_F2 LINE L1 -12 6570 6428 4 775 281 303 56 70 chrX 24973629 24973913 -141676383 - RMER17C LTR ERVK -48 362 83 4 775 5756 138 13 27 chrX 24974351 24975343 -141674953 + Lx3A LINE L1 5997 6974 -7 4 775 220 225 0 24 chrX 24976541 24976582 -141673714 - B1F1 SINE Alu -97 52 13 4 775 220 309 87 56 chrX 24976658 24976819 -141673477 + L2 LINE L2 1494 1659 -1760 4 775 181 347 52 10 chrX 24977182 24977278 -141673018 + L2 LINE L2 1926 2025 -1394 4 775 531 339 40 15 chrX 24977292 24977499 -141672797 - B4A SINE B4 -2 290 83 4 775 228 86 0 0 chrX 24977544 24977579 -141672717 + (TGG)n Simple_repeat Simple_repeat 1 35 0 4 775 294 342 116 34 chrX 24977675 24977908 -141672388 + L2 LINE L2 2049 2300 -1119 4 775 4563 134 12 19 chrX 24977913 24978710 -141671586 + YREP_Mm Unknown Unknown 986 1777 -35 4 775 441 298 0 0 chrX 24979551 24979655 -141670641 + B3 SINE B2 98 201 -15 4 775 384 252 75 8 chrX 24979715 24979835 -141670461 + B1F SINE Alu 21 148 -1 4 775 953 232 19 0 chrX 24979981 24980188 -141670108 + B3 SINE B2 1 211 -5 4 775 654 316 95 37 chrX 24980423 24980696 -141669600 + B4A SINE B4 4 292 0 4 775 16873 175 36 63 chrX 24980822 24983528 -141666768 + L1VL2 LINE L1 301 2807 -3076 4 775 988 104 0 0 chrX 24983528 24983662 -141666634 + B1_Mus2 SINE Alu 1 134 -13 4 775 16873 159 18 60 chrX 24983662 24985709 -141664587 + L1VL2 LINE L1 2808 4756 -1127 4 775 5199 144 19 1 chrX 24985710 24986561 -141663735 + Lx LINE L1 5787 6652 -2 4 775 184 159 59 73 chrX 24987368 24987436 -141662860 + L2 LINE L2 919 985 -2434 4 775 267 31 0 0 chrX 24987859 24987891 -141662405 + (TC)n Simple_repeat Simple_repeat 2 33 0 4 775 219 36 0 0 chrX 24987892 24987920 -141662376 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 775 24 0 0 0 chrX 24988198 24988222 -141662074 + AT_rich Low_complexity Low_complexity 1 24 0 4 775 241 286 134 60 chrX 24988222 24988356 -141661940 + B1F SINE Alu 4 147 -2 4 775 214 324 35 79 chrX 24988351 24988371 -141661925 + ID SINE ID 70 84 -140 4 775 246 284 105 29 chrX 24988371 24988476 -141661820 + B1F SINE Alu 1 113 -36 4 775 799 289 39 24 chrX 24989264 24989470 -141660826 - B3 SINE B2 -6 210 2 4 775 947 133 7 0 chrX 24989726 24989869 -141660427 - B1_Mus1 SINE Alu -1 147 4 4 775 374 261 160 10 chrX 24989870 24990070 -141660226 - B4 SINE B4 -62 230 1 4 775 180 0 0 0 chrX 24990327 24990347 -141659949 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 775 231 346 0 0 chrX 24990646 24990698 -141659598 + ID4 SINE ID 4 55 -28 4 775 21 36 0 0 chrX 24990711 24990739 -141659557 + AT_rich Low_complexity Low_complexity 1 28 0 4 775 318 322 49 8 chrX 24990987 24991109 -141659187 - B1F SINE Alu -3 146 20 4 775 3949 121 16 14 chrX 24991359 24992048 -141658248 + MusHAL1 LINE L1 243 932 -1780 4 775 15951 138 9 4 chrX 24992068 24995559 -141654737 + L1_Mus3 LINE L1 3132 6634 -4 4 775 208 147 0 0 chrX 24995990 24996024 -141654272 + (A)n Simple_repeat Simple_repeat 1 34 0 4 775 240 111 0 0 chrX 24996216 24996252 -141654044 + (TATATG)n Simple_repeat Simple_repeat 3 38 0 4 775 348 24 0 0 chrX 24996252 24996292 -141654004 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 775 282 344 43 0 chrX 24996877 24996970 -141653326 + B1F1 SINE Alu 1 97 -52 4 775 242 352 22 11 chrX 24997883 24997972 -141652324 - B3 SINE B2 -14 202 113 4 775 221 269 0 69 chrX 24997976 24998048 -141652248 - B4A SINE B4 -139 153 87 4 775 401 311 67 13 chrX 24998057 24998207 -141652089 - B3 SINE B2 -53 163 6 4 775 405 0 0 0 chrX 24998294 24998339 -141651957 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 775 5257 91 9 8 chrX 24998459 24999077 -141651219 - L1_Mus1 LINE L1 0 6567 5949 4 775 225 0 0 0 chrX 24999077 24999102 -141651194 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 775 5257 91 9 8 chrX 24999102 24999235 -141651061 - L1_Mus1 LINE L1 -619 5948 5815 4 775 4810 118 1 1 chrX 24999235 25000000 -141650296 - MusHAL1 LINE L1 -493 2219 1455 4 775 6323 149 3 0 chrX 25000000 25001164 -141649132 - L1_Mm LINE L1 -3225 2658 1492 1 775 6406 154 28 7 chrX 25001162 25002483 -141647813 - L1_Mus3 LINE L1 -690 5948 4602 2 775 596 180 9 0 chrX 25002480 25002591 -141647705 - Lx4A LINE L1 -228 6830 6719 3 775 1926 263 67 13 chrX 25003451 25004063 -141646233 - Lx2B LINE L1 -14 6986 6342 4 775 2940 153 65 15 chrX 25004060 25004220 -141646076 + Lx6 LINE L1 4537 4730 -1147 5 775 297 0 0 0 chrX 25004220 25004253 -141646043 + (TAA)n Simple_repeat Simple_repeat 1 33 0 6 775 2940 153 65 15 chrX 25004253 25004703 -141645593 + Lx6 LINE L1 4731 5178 -699 5 775 317 113 111 16 chrX 25004876 25004939 -141645357 - URR1B DNA MER1_type 0 225 157 7 775 414 0 0 0 chrX 25004941 25004987 -141645309 + (TA)n Simple_repeat Simple_repeat 2 47 0 8 775 341 290 71 47 chrX 25005341 25005511 -141644785 + RLTR1B LTR ERV1 166 339 -173 9 775 24 32 0 0 chrX 25005649 25005680 -141644616 + AT_rich Low_complexity Low_complexity 1 31 0 1 775 1680 238 9 18 chrX 25005820 25006419 -141643877 - Lx6 LINE L1 -1352 6108 5512 1 775 7873 38 1 0 chrX 25006420 25007729 -141642567 - L1Md_T LINE L1 0 6582 5273 1 775 3526 161 20 23 chrX 25007729 25007853 -141642443 + L1_Mus3 LINE L1 5978 6100 -538 1 775 2632 73 3 3 chrX 25007853 25008195 -141642101 + ORR1A1 LTR MaLR 1 342 -4 1 775 3526 161 20 23 chrX 25008195 25008725 -141641571 + L1_Mus3 LINE L1 6101 6630 -8 1 775 972 200 32 11 chrX 25008726 25009009 -141641287 + L1_Mur3 LINE L1 2999 3287 -2593 1 775 1550 259 20 28 chrX 25009038 25009312 -141640984 + Lx6 LINE L1 5630 5903 -1557 5 775 1978 205 17 14 chrX 25009312 25009732 -141640564 + MTC LTR MaLR 1 421 0 1 775 1550 259 20 28 chrX 25009732 25009966 -141640330 + Lx6 LINE L1 5904 6134 -1326 5 775 233 307 0 17 chrX 25009966 25010082 -141640214 + Lx6 LINE L1 7332 7445 -15 5 775 2649 68 23 6 chrX 25010238 25010592 -141639704 + L1Md_F2 LINE L1 6214 6573 -9 1 775 1268 208 71 44 chrX 25010592 25011021 -141639275 + RLTR21 LTR ERVK 711 1254 -150 1 775 2752 108 10 2 chrX 25011259 25011676 -141638620 - BGLII LTR ERVK 0 421 2 1 775 2670 215 44 50 chrX 25011678 25012609 -141637687 - RMER3D-int LTR ERVK -1 2841 1917 1 775 2046 203 88 79 chrX 25012623 25012958 -141637338 - RMER3D-int LTR ERVK -1164 1678 1386 1 775 3316 40 2 0 chrX 25012958 25013353 -141636943 + MTA_Mm LTR MaLR 1 396 0 2 775 2046 203 88 79 chrX 25013353 25013674 -141636622 - RMER3D-int LTR ERVK -1457 1385 1016 1 775 491 141 75 25 chrX 25013720 25013880 -141636416 + CT-rich Low_complexity Low_complexity 3 170 0 2 775 508 232 73 38 chrX 25013935 25014243 -141636053 - RMER3D-int LTR ERVK -2038 804 354 1 775 617 207 25 40 chrX 25014309 25014510 -141635786 - RMER3D-int LTR ERVK -1993 849 652 2 775 444 145 0 0 chrX 25014525 25014613 -141635683 - RMER3D-int LTR ERVK -2278 564 489 2 775 1708 269 49 17 chrX 25014877 25015453 -141634843 - Lx7 LINE L1 -1042 6654 6061 2 775 603 257 58 33 chrX 25015489 25015763 -141634533 - Lx7 LINE L1 -1559 6137 5857 2 775 597 269 39 78 chrX 25016059 25016265 -141634031 + B3A SINE B2 1 198 0 2 775 195 42 0 0 chrX 25016327 25016351 -141633945 + (GGAA)n Simple_repeat Simple_repeat 3 26 0 2 775 862 289 0 0 chrX 25016436 25016640 -141633656 - B3 SINE B2 -12 204 1 2 775 953 284 84 0 chrX 25017060 25017356 -141632940 - MER2 DNA MER2_type -24 321 1 2 775 832 177 61 14 chrX 25017515 25017727 -141632569 + L1_Mm LINE L1 5230 5451 -432 2 775 501 298 18 115 chrX 25017761 25018238 -141632058 + L1_Mus1 LINE L1 261 608 -6030 3 775 539 224 37 0 chrX 25018275 25018409 -141631887 + L1Md_F LINE L1 567 705 -5814 3 775 1942 211 15 0 chrX 25018418 25018892 -141631404 + L1Md_F LINE L1 628 1108 -5411 3 775 24695 124 7 67 chrX 25018889 25024785 -141625511 + L1_Mus1 LINE L1 1071 6567 0 3 775 4242 172 20 4 chrX 25024794 25025612 -141624684 + Lx2 LINE L1 5813 6643 -354 3 775 1298 157 5 0 chrX 25025612 25025828 -141624468 + Lx2 LINE L1 6775 6991 -6 3 775 372 213 0 13 chrX 25026120 25026196 -141624100 - ID_B1 SINE B4 -2 222 148 3 775 558 43 0 0 chrX 25026199 25026268 -141624028 + (TA)n Simple_repeat Simple_repeat 2 70 0 3 775 306 262 56 46 chrX 25026268 25026296 -141624000 - B1F SINE Alu -85 64 39 3 775 5839 190 37 9 chrX 25026296 25027839 -141622457 - Lx3C LINE L1 -40 6936 5354 3 775 6618 181 31 11 chrX 25027852 25029295 -141621001 + Lx4A LINE L1 3725 5196 -681 3 775 4565 32 4 0 chrX 25029290 25029967 -141620329 - L1Md_T LINE L1 -595 5987 5309 3 775 581 64 0 0 chrX 25029962 25030040 -141620256 + L1Md_T LINE L1 5509 5586 -297 3 775 7720 44 39 0 chrX 25030040 25030999 -141619297 + L1Md_T LINE L1 5587 6582 0 3 775 5230 196 22 10 chrX 25031012 25032576 -141617720 + Lx4A LINE L1 5190 6779 -279 3 775 249 378 33 30 chrX 25032940 25033448 -141616848 - RMER1C Other Other -458 884 374 4 775 472 412 13 10 chrX 25033556 25033865 -141616431 - RMER1C Other Other -523 819 510 4 775 23 0 0 0 chrX 25033957 25033980 -141616316 + AT_rich Low_complexity Low_complexity 1 23 0 4 775 281 409 26 19 chrX 25034084 25034348 -141615948 - RMER1C Other Other -613 729 464 4 96 265 427 8 12 chrX 25034567 25034809 -141615487 - RMER1C Other Other -593 749 509 4 776 441 0 0 0 chrX 25035240 25035289 -141615007 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 776 260 406 19 13 chrX 25035507 25035664 -141614632 - RMER1C Other Other -691 651 494 4 776 272 400 31 31 chrX 25036497 25036688 -141613608 - RMER1C Other Other -585 757 567 4 776 257 417 38 16 chrX 25036803 25037120 -141613176 - RMER1C Other Other -607 735 412 4 776 495 33 0 0 chrX 25037703 25037764 -141612532 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 776 226 328 36 29 chrX 25037873 25038011 -141612285 - RMER1C Other Other -753 589 451 4 776 455 378 43 20 chrX 25038332 25038678 -141611618 - RMER1C Other Other -468 874 521 5 776 256 425 25 19 chrX 25039215 25039529 -141610767 - RMER1C Other Other -540 802 487 5 776 3876 193 22 4 chrX 25041272 25042115 -141608181 + L1Md_A LINE L1 233 1091 -5633 5 776 2567 97 0 0 chrX 25042113 25042506 -141607790 + L1Md_A LINE L1 1977 2369 -3514 5 776 19845 67 1 5 chrX 25042518 25045265 -141605031 + L1Md_A LINE L1 2850 5586 -297 5 776 7633 68 2 0 chrX 25045265 25046247 -141604049 + L1Md_F2 LINE L1 5587 6570 -12 5 776 3731 87 0 7 chrX 25046248 25047092 -141603204 + L1Md_Gf LINE L1 828 1762 -4124 5 776 910 105 0 14 chrX 25047096 25047241 -141603055 - L1Md_F2 LINE L1 -12 6570 6428 5 776 281 326 57 64 chrX 25047522 25047804 -141602492 - RMER17C LTR ERVK -48 362 83 5 776 5889 126 7 26 chrX 25048267 25049232 -141601064 + Lx3A LINE L1 6028 6974 -7 5 776 242 314 80 56 chrX 25050550 25050712 -141599584 + L2 LINE L2 1494 1659 -1760 5 776 197 337 52 10 chrX 25051075 25051171 -141599125 + L2 LINE L2 1926 2025 -1394 5 776 583 318 40 15 chrX 25051185 25051392 -141598904 - B4A SINE B4 -2 290 83 5 776 373 288 158 81 chrX 25051557 25051791 -141598505 + L2 LINE L2 2049 2300 -1119 5 776 4574 132 12 20 chrX 25051796 25052594 -141597702 + YREP_Mm Unknown Unknown 986 1777 -35 6 776 440 298 0 0 chrX 25053439 25053543 -141596753 + B3 SINE B2 98 201 -15 6 776 385 252 75 8 chrX 25053603 25053723 -141596573 + B1F SINE Alu 21 148 -1 6 776 954 232 19 0 chrX 25053869 25054076 -141596220 + B3 SINE B2 1 211 -5 6 776 662 316 95 37 chrX 25054310 25054583 -141595713 + B4A SINE B4 4 292 0 6 776 16959 178 32 50 chrX 25054709 25057402 -141592894 + L1VL2 LINE L1 300 2807 -3076 6 776 992 104 0 0 chrX 25057402 25057536 -141592760 + B1_Mus2 SINE Alu 1 134 -13 6 776 582 63 0 0 chrX 25057546 25057625 -141592671 + (TAA)n Simple_repeat Simple_repeat 2 80 0 6 776 16959 166 19 38 chrX 25057625 25059588 -141590708 + L1VL2 LINE L1 2810 4755 -1128 6 776 5156 140 27 1 chrX 25059589 25060433 -141589863 + Lx LINE L1 5787 6652 -2 6 776 21 0 0 0 chrX 25060433 25060454 -141589842 + AT_rich Low_complexity Low_complexity 1 21 0 6 776 21 82 0 0 chrX 25060522 25060571 -141589725 + AT_rich Low_complexity Low_complexity 1 49 0 7 776 23 33 0 0 chrX 25061393 25061423 -141588873 + AT_rich Low_complexity Low_complexity 1 30 0 7 776 393 22 0 0 chrX 25061709 25061755 -141588541 + (TC)n Simple_repeat Simple_repeat 2 47 0 7 776 432 0 0 0 chrX 25061756 25061804 -141588492 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 776 24 0 0 0 chrX 25062082 25062106 -141588190 + AT_rich Low_complexity Low_complexity 1 24 0 7 776 233 294 134 60 chrX 25062106 25062240 -141588056 + B1F SINE Alu 4 147 -2 7 776 233 325 47 70 chrX 25062235 25062255 -141588041 + ID_B1 SINE B4 70 195 -29 7 776 266 274 101 28 chrX 25062255 25062364 -141587932 + B1F SINE Alu 1 117 -32 7 776 786 289 39 24 chrX 25063147 25063353 -141586943 - B3 SINE B2 -6 210 2 7 776 979 119 7 0 chrX 25063608 25063751 -141586545 - B1_Mus1 SINE Alu -1 147 4 7 776 369 261 160 10 chrX 25063752 25063952 -141586344 - B4 SINE B4 -62 230 1 8 776 183 42 0 0 chrX 25064209 25064233 -141586063 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 8 776 21 36 0 0 chrX 25064594 25064622 -141585674 + AT_rich Low_complexity Low_complexity 1 28 0 8 776 321 322 49 8 chrX 25064870 25064992 -141585304 - B1F SINE Alu -3 146 20 8 776 24914 150 9 1 chrX 25065243 25070392 -141579904 + L1_Mus3 LINE L1 1445 6634 -4 8 776 23 54 0 0 chrX 25070814 25070851 -141579445 + AT_rich Low_complexity Low_complexity 1 37 0 8 776 416 138 25 0 chrX 25071021 25071091 -141579205 + (TATATG)n Simple_repeat Simple_repeat 6 77 0 8 776 204 40 0 0 chrX 25071091 25071116 -141579180 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 776 416 138 25 0 chrX 25071116 25071125 -141579171 + (TATATG)n Simple_repeat Simple_repeat 3 11 0 8 776 283 295 36 0 chrX 25071696 25071797 -141578499 + B4A SINE B4 82 190 -102 8 776 227 242 14 83 chrX 25072801 25072873 -141577423 - B4A SINE B4 -139 153 87 9 776 478 291 65 13 chrX 25072882 25073035 -141577261 - B3 SINE B2 -53 163 3 9 776 225 0 0 0 chrX 25073119 25073144 -141577152 + (CA)n Simple_repeat Simple_repeat 2 26 0 9 776 7301 105 6 3 chrX 25073262 25075050 -141575246 - L1Md_F2 LINE L1 -2 6565 4771 9 776 18336 132 130 14 chrX 25075026 25079548 -141570748 - L1Md_F2 LINE L1 0 6582 1492 9 776 6594 159 27 16 chrX 25079546 25080885 -141569411 - L1_Mus3 LINE L1 -690 5948 4601 9 776 638 189 9 0 chrX 25080884 25080995 -141569301 - Lx4A LINE L1 -228 6830 6719 9 776 2202 263 68 3 chrX 25081858 25082464 -141567832 - Lx2B LINE L1 -14 6986 6342 9 776 3070 161 65 15 chrX 25082461 25082622 -141567674 + L1_Mur2 LINE L1 4537 4730 -1147 9 776 216 0 0 0 chrX 25082622 25082646 -141567650 + (TAA)n Simple_repeat Simple_repeat 1 24 0 9 776 3070 161 65 15 chrX 25082646 25083095 -141567201 + L1_Mur2 LINE L1 4731 5178 -699 9 776 398 193 22 11 chrX 25083268 25083357 -141566939 - URR1B DNA MER1_type 0 225 136 9 776 24 32 0 0 chrX 25083461 25083492 -141566804 + AT_rich Low_complexity Low_complexity 1 31 0 1 776 3037 242 21 11 chrX 25083632 25084623 -141565673 - Lx6 LINE L1 -1352 6108 5105 1 776 1204 220 37 9 chrX 25084628 25084954 -141565342 - Lx6 LINE L1 -2035 3845 3511 1 776 655 233 66 43 chrX 25084954 25085118 -141565178 - Lx6 LINE L1 -3397 2480 2311 1 776 657 0 0 0 chrX 25085118 25085191 -141565105 + (TC)n Simple_repeat Simple_repeat 2 74 0 1 776 655 233 66 43 chrX 25085191 25085237 -141565059 - Lx6 LINE L1 -3567 2310 2265 1 776 616 299 64 32 chrX 25085243 25085461 -141564835 - ORR1D2 LTR MaLR -145 225 1 1 776 420 395 8 4 chrX 25085463 25085697 -141564599 + Lx8 LINE L1 6956 7190 -283 1 776 926 290 48 22 chrX 25085806 25086162 -141564134 + ORR1D2 LTR MaLR 5 369 -1 1 776 503 256 8 8 chrX 25086317 25086439 -141563857 + Lx8 LINE L1 6640 6761 -712 1 776 225 256 12 25 chrX 25086706 25086786 -141563510 - Lx9 LINE L1 -1398 6246 6168 1 776 262 445 0 0 chrX 25086840 25086977 -141563319 + RMER1C Other Other 536 672 -670 1 776 340 424 16 31 chrX 25087311 25087749 -141562547 + RMER1C Other Other 401 871 -471 1 776 416 40 26 26 chrX 25088179 25088256 -141562040 + (CAAAAA)n Simple_repeat Simple_repeat 3 79 0 1 776 275 350 82 18 chrX 25088372 25088537 -141561759 + RMER1C Other Other 488 639 -703 1 776 10834 110 7 22 chrX 25089039 25091546 -141558750 - L1Md_A LINE L1 -3185 2698 233 1 776 355 418 42 41 chrX 25092995 25093640 -141556656 + RMER1C Other Other 390 877 -465 1 776 539 411 36 18 chrX 25094146 25094594 -141555702 + RMER1C Other Other 412 867 -475 1 776 306 421 35 26 chrX 25094636 25094948 -141555348 + RMER1C Other Other 423 737 -605 1 776 288 0 0 0 chrX 25095059 25095091 -141555205 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 776 362 434 30 23 chrX 25095336 25095984 -141554312 + RMER1C Other Other 378 833 -509 1 776 265 398 47 10 chrX 25096114 25096307 -141553989 + RMER1C Other Other 462 661 -681 1 776 375 417 46 44 chrX 25096914 25097704 -141552592 + RMER1C Other Other 414 873 -469 1 776 338 430 8 12 chrX 25097939 25098193 -141552103 + RMER1C Other Other 509 761 -581 1 776 287 400 83 14 chrX 25098394 25098613 -141551683 + RMER1C Other Other 464 802 -540 1 776 21 0 0 0 chrX 25098754 25098775 -141551521 + AT_rich Low_complexity Low_complexity 1 21 0 1 776 368 441 13 10 chrX 25098866 25099175 -141551121 + RMER1C Other Other 510 819 -523 1 776 386 388 53 32 chrX 25099284 25099887 -141550409 + RMER1C Other Other 393 848 -494 1 776 10524 185 29 8 chrX 25100151 25103140 -141547156 - Lx4A LINE L1 -279 6779 3720 1 776 6520 188 36 6 chrX 25103148 25104714 -141545582 + Lx3C LINE L1 5354 6964 -12 1 776 1059 186 5 0 chrX 25104720 25104913 -141545383 - Lx2 LINE L1 -39 6958 6765 1 776 4482 168 22 4 chrX 25104902 25105711 -141544585 - Lx2 LINE L1 -352 6645 5822 1 776 4509 97 5 5 chrX 25105722 25106366 -141543930 - L1_Mus1 LINE L1 0 6567 5924 1 776 36525 30 1 8 chrX 25106366 25111568 -141538728 + L1Md_A LINE L1 423 5587 -296 1 776 8964 34 0 0 chrX 25111569 25112563 -141537733 + L1Md_A LINE L1 5589 6582 0 1 776 15429 154 204 71 chrX 25112578 25117706 -141532590 - L1_Mus1 LINE L1 -630 5937 261 1 776 997 160 62 14 chrX 25117738 25117947 -141532349 - L1_Mm LINE L1 -430 5453 5235 1 776 969 263 95 10 chrX 25118109 25118405 -141531891 + MER2 DNA MER2_type 1 321 -24 1 776 896 293 0 0 chrX 25118820 25119025 -141531271 + B3 SINE B2 1 205 -11 1 776 216 0 0 0 chrX 25119107 25119131 -141531165 + (TTCC)n Simple_repeat Simple_repeat 3 26 0 1 776 649 254 44 82 chrX 25119196 25119402 -141530894 - B3A SINE B2 0 198 1 1 776 400 93 0 26 chrX 25119647 25119724 -141530572 + (TA)n Simple_repeat Simple_repeat 2 76 0 1 776 727 245 56 33 chrX 25119735 25120005 -141530291 + Lx7 LINE L1 5857 6132 -1564 1 776 1863 277 47 19 chrX 25120046 25120624 -141529672 + Lx7 LINE L1 6061 6654 -1042 1 776 682 222 57 56 chrX 25120888 25121237 -141529059 + RMER3D-int LTR ERVK 489 849 -1993 1 776 572 223 63 34 chrX 25121258 25121613 -141528683 + RMER3D-int LTR ERVK 359 806 -2036 1 776 514 110 80 27 chrX 25121615 25121765 -141528531 + GA-rich Low_complexity Low_complexity 3 160 0 1 776 2321 206 88 75 chrX 25121787 25122130 -141528166 + RMER3D-int LTR ERVK 1014 1383 -1459 1 776 3400 56 2 0 chrX 25122130 25122525 -141527771 - MTA_Mm LTR MaLR 0 396 1 1 776 2321 206 89 80 chrX 25122525 25122881 -141527415 + RMER3D-int LTR ERVK 1384 1696 -1146 1 776 3068 206 116 12 chrX 25122862 25123803 -141526493 + MYSERV16_I-int LTR ERVK 1288 2326 0 1 776 3009 90 22 2 chrX 25123803 25124216 -141526080 + BGLII LTR ERVK 1 421 0 1 776 1237 199 78 60 chrX 25124486 25124886 -141525410 - RLTR21 LTR ERVK -460 1112 706 1 776 11968 93 3 1 chrX 25124886 25127226 -141523070 - L1Md_F2 LINE L1 -12 6570 4226 1 776 13101 114 14 42 chrX 25127210 25130029 -141520267 - L1Md_F2 LINE L1 -2718 3165 446 1 776 833 154 11 56 chrX 25130032 25130211 -141520085 - RLTR21 LTR ERVK -855 717 547 1 776 1389 242 18 39 chrX 25130252 25130583 -141519713 - RLTR21 LTR ERVK -1248 324 1 1 776 315 250 17 35 chrX 25130966 25131082 -141519214 - Lx6 LINE L1 -15 7445 7332 1 776 415 300 54 50 chrX 25131068 25131310 -141518986 - Lx6 LINE L1 -1313 6147 5905 1 776 2166 191 15 15 chrX 25131316 25131725 -141518571 - MTC LTR MaLR 0 421 13 1 776 1324 222 17 14 chrX 25131735 25132032 -141518264 - Lx7 LINE L1 -1792 5904 5607 1 776 1193 196 28 3 chrX 25132039 25132321 -141517975 - L1_Mur3 LINE L1 -2593 3287 2999 1 776 4022 141 21 24 chrX 25132322 25132853 -141517443 - L1_Mus3 LINE L1 -7 6631 6101 1 776 2636 62 62 3 chrX 25132853 25133176 -141517120 - ORR1A1 LTR MaLR -4 342 1 1 776 4022 141 21 24 chrX 25133176 25133300 -141516996 - L1_Mus3 LINE L1 -538 6100 5978 1 776 2312 51 57 10 chrX 25133300 25133599 -141516697 + L1Md_F2 LINE L1 5273 5585 -298 1 776 7493 89 5 14 chrX 25133600 25134602 -141515694 + L1Md_F2 LINE L1 5587 6579 -3 1 776 242 161 35 35 chrX 25135927 25135985 -141514311 + GA-rich Low_complexity Low_complexity 2 59 0 1 776 419 247 24 65 chrX 25136144 25136313 -141513983 - L1_Rod LINE L1 -305 5542 5381 1 776 2139 201 78 42 chrX 25136313 25136867 -141513429 + RLTR31A_Mm LTR ERVK 11 584 0 1 776 297 146 123 28 chrX 25136867 25136973 -141513323 - L1_Rod LINE L1 -475 5372 5257 1 776 817 136 7 67 chrX 25137112 25137262 -141513034 - B1_Mus1 SINE Alu 0 148 8 1 776 3102 330 35 43 chrX 25137708 25137999 -141512297 - RodERV21-int LTR ERV1 -198 4793 4501 1 776 2648 126 35 58 chrX 25137999 25138429 -141511867 - RLTR9B2 LTR ERVK 0 420 1 1 776 3102 330 35 43 chrX 25138429 25139910 -141510386 - RodERV21-int LTR ERV1 -491 4500 3036 1 776 1114 287 0 6 chrX 25140617 25140929 -141509367 - MuRRS4-int LTR ERV1 -118 4945 4636 1 776 804 204 0 6 chrX 25140920 25141078 -141509218 - MuRRS4-int LTR ERV1 -119 4944 4788 1 776 1722 156 172 15 chrX 25141201 25141684 -141508612 - MuRRS4-int LTR ERV1 -2872 2191 1633 1 776 1620 250 35 9 chrX 25141704 25142128 -141508168 - MuRRS4-int LTR ERV1 -3617 1446 1012 1 776 722 262 16 74 chrX 25142275 25142531 -141507765 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 1 776 569 139 111 17 chrX 25142531 25142648 -141507648 - MuRRS4-int LTR ERV1 -4186 877 750 1 776 382 202 10 60 chrX 25142632 25142732 -141507564 - RMER16-int LTR ERVK -3958 1448 1354 1 776 4320 133 26 3 chrX 25142836 25143517 -141506779 - RMER16-int LTR ERVK -4045 1361 665 1 776 1260 234 70 6 chrX 25143537 25143851 -141506445 - MuRRS4-int LTR ERV1 -4388 675 342 1 776 636 251 56 83 chrX 25144203 25144753 -141505543 - MuRRS4-int LTR ERV1 -4565 498 5 1 776 700 258 58 29 chrX 25144755 25144998 -141505298 - LTRIS4 LTR ERV1 0 519 276 1 776 369 0 0 0 chrX 25145524 25145565 -141504731 + (A)n Simple_repeat Simple_repeat 1 41 0 1 776 425 326 55 65 chrX 25145724 25146200 -141504096 - RodERV21-int LTR ERV1 -3035 4056 3586 1 776 1326 284 14 49 chrX 25146327 25146757 -141503539 - RodERV21-int LTR ERV1 -2273 2718 2304 1 776 4763 95 23 0 chrX 25146762 25147427 -141502869 - L1_Mus3 LINE L1 -247 6391 5712 1 776 1514 149 0 0 chrX 25147429 25147657 -141502639 + L1_Mus3 LINE L1 5473 5700 -183 1 776 1768 169 9 21 chrX 25147658 25147984 -141502312 - RLTR14 LTR ERV1 -54 328 7 1 776 567 161 0 11 chrX 25148009 25148103 -141502193 - RLTR14-int LTR ERV1 -5 5312 5220 1 776 1651 175 118 6 chrX 25148126 25148483 -141501813 - RLTR14-int LTR ERV1 -205 5112 4716 1 776 1881 118 27 66 chrX 25148483 25148818 -141501478 - RLTRETN_Mm LTR ERVK 0 322 1 1 776 10636 152 59 57 chrX 25148818 25152220 -141498076 - MMETn-int LTR ERVK 0 4844 1 1 776 236 242 45 116 chrX 25152225 25152337 -141497959 - RLTRETN_Mm LTR ERVK 0 420 304 1 776 31551 81 1 17 chrX 25152337 25157253 -141493043 - L1Md_F LINE L1 -532 5351 519 1 776 6951 94 1 7 chrX 25157254 25158196 -141492100 - L1Md_F LINE L1 -5494 1025 90 1 776 350 164 0 16 chrX 25158248 25158339 -141491957 + MMETn-int LTR ERVK 2473 2546 -2298 1 776 4660 71 0 7 chrX 25158339 25158940 -141491356 + L1Md_F2 LINE L1 5954 6554 -28 1 776 3924 39 2 0 chrX 25158940 25159381 -141490915 + L1Md_T LINE L1 6140 6581 -1 1 776 303 0 64 0 chrX 25159409 25159456 -141490840 + (CAA)n Simple_repeat Simple_repeat 2 51 0 1 776 3046 186 16 41 chrX 25159456 25160370 -141489926 + MMETn-int LTR ERVK 2542 3719 -1125 1 776 779 195 0 0 chrX 25160365 25160488 -141489808 + MMETn-int LTR ERVK 6539 6661 -745 1 776 3464 203 50 19 chrX 25160519 25161261 -141489035 - RLTR14-int LTR ERV1 -2117 3200 2436 1 776 1824 224 57 34 chrX 25162716 25163239 -141487057 + RLTR40 LTR ERVK 22 556 -261 1 776 379 160 21 0 chrX 25163241 25163335 -141486961 + GA-rich Low_complexity Low_complexity 2 97 0 1 776 593 284 52 44 chrX 25163335 25163522 -141486774 + RLTR40 LTR ERVK 566 752 -65 1 776 6734 84 31 2 chrX 25163522 25163938 -141486358 - RLTR13B1 LTR ERVK 0 893 476 1 776 252 0 0 0 chrX 25163938 25163966 -141486330 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 776 6734 84 31 2 chrX 25163966 25164417 -141485879 - RLTR13B1 LTR ERVK -418 475 3 1 776 593 284 52 44 chrX 25164417 25164479 -141485817 + RLTR40 LTR ERVK 753 817 0 1 776 330 45 0 0 chrX 25164670 25164714 -141485582 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1 777 729 234 68 11 chrX 25166246 25166436 -141483860 - Lx9 LINE L1 -243 7401 7201 1 777 354 242 0 0 chrX 25166434 25166525 -141483771 + Lx9 LINE L1 7552 7642 -2 1 777 479 282 14 7 chrX 25166529 25166672 -141483624 + Lx5 LINE L1 6825 6968 -82 1 777 249 33 0 0 chrX 25166687 25166717 -141483579 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 1 777 706 215 34 14 chrX 25166729 25166875 -141483421 + B1_Mur2 SINE Alu 1 149 0 1 777 2064 167 31 0 chrX 25166884 25167243 -141483053 + L1_Mus3 LINE L1 6261 6630 -8 1 777 26 30 0 0 chrX 25167265 25167298 -141482998 + AT_rich Low_complexity Low_complexity 1 33 0 1 777 235 200 0 68 chrX 25167364 25167423 -141482873 + A-rich Low_complexity Low_complexity 4 58 0 1 777 743 269 14 9 chrX 25167431 25167645 -141482651 + Lx4B LINE L1 6809 7023 -35 1 777 2743 176 32 2 chrX 25167681 25168273 -141482023 - L1_Mur2 LINE L1 -1176 4701 4092 1 777 10061 141 39 23 chrX 25168273 25169644 -141480652 - RLTR22_Mur LTR ERVK 0 1848 461 1 777 484 53 0 26 chrX 25169644 25169722 -141480574 + (TAG)n Simple_repeat Simple_repeat 3 78 0 1 777 10061 141 39 23 chrX 25169722 25170169 -141480127 - RLTR22_Mur LTR ERVK -1388 460 3 1 777 725 174 199 0 chrX 25170169 25170410 -141479886 - L1_Mur2 LINE L1 -1782 4095 3807 1 777 1398 136 16 4 chrX 25170454 25170697 -141479599 + L1_Mus4 LINE L1 6391 6636 0 1 777 225 0 0 0 chrX 25171186 25171211 -141479085 + (CAAAG)n Simple_repeat Simple_repeat 3 27 0 1 777 24 0 0 0 chrX 25172605 25172629 -141477667 + AT_rich Low_complexity Low_complexity 1 24 0 1 777 304 293 30 8 chrX 25172910 25173044 -141477252 + L1_Mur2 LINE L1 4334 4470 -1407 1 777 812 326 41 26 chrX 25173049 25173484 -141476812 + Lx6 LINE L1 6506 7296 -164 1 777 1471 186 20 90 chrX 25173461 25173915 -141476381 - L1_Mur2 LINE L1 -2136 3741 3320 1 777 1238 57 0 0 chrX 25173917 25174075 -141476221 - L1_Mus1 LINE L1 0 6567 6410 1 777 16166 127 6 3 chrX 25174075 25177071 -141473225 - L1_Mus1 LINE L1 -431 6136 3134 1 777 207 0 0 0 chrX 25177071 25177094 -141473202 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 777 16166 135 7 4 chrX 25177094 25177150 -141473146 - L1_Mus1 LINE L1 -2750 3133 3077 1 777 6136 67 28 21 chrX 25177150 25177999 -141472297 - RLTR13A LTR ERVK 0 855 1 1 777 6773 60 5 22 chrX 25178007 25178965 -141471331 - ETnERV3-int LTR ERVK -11 5797 4856 1 777 306 281 30 23 chrX 25179598 25179729 -141470567 - MMTV-int LTR ERVK -1603 5650 5519 1 777 5947 319 45 37 chrX 25179758 25184325 -141465971 - MMTV-int LTR ERVK -1604 5640 915 1 777 277 287 0 0 chrX 25184707 25184808 -141465488 - MMTV-int LTR ERVK -6874 379 279 1 777 1032 152 0 11 chrX 25184880 25185066 -141465230 - MMTV-int LTR ERVK -5622 186 3 1 777 6205 64 28 21 chrX 25185068 25185917 -141464379 - RLTR13A LTR ERVK 0 855 1 1 777 4445 149 4 0 chrX 25185917 25186709 -141463587 - MusHAL1 LINE L1 -835 1877 1083 2 777 1311 183 52 0 chrX 25186705 25186956 -141463340 + L1VL1 LINE L1 3 266 -6156 2 777 4906 129 29 13 chrX 25186956 25188650 -141461646 + L1Md_F LINE L1 277 1998 -3885 2 777 34654 33 1 7 chrX 25188649 25193853 -141456443 + L1Md_A LINE L1 417 5586 -297 2 777 7679 41 45 0 chrX 25193853 25194805 -141455491 + L1Md_A LINE L1 5587 6581 -1 2 777 25533 91 2 31 chrX 25194806 25196282 -141454014 + L1Md_F2 LINE L1 1987 3462 -2421 2 777 1204 94 55 0 chrX 25196282 25196463 -141453833 + B2_Mm2 SINE B2 4 194 -1 2 777 25533 85 2 27 chrX 25196463 25199130 -141451166 + L1Md_F2 LINE L1 3463 6015 -567 2 777 1806 152 35 0 chrX 25199130 25199473 -141450823 - ETnERV2-int LTR ERVK -3611 3795 3441 2 777 682 178 12 58 chrX 25199698 25199871 -141450425 - ETnERV2-int LTR ERVK -2654 2190 2026 2 777 557 82 0 0 chrX 25199879 25199952 -141450344 + L1Md_F2 LINE L1 5513 5585 -298 2 777 7700 65 1 2 chrX 25199953 25200937 -141449359 + L1Md_F2 LINE L1 5587 6569 -13 2 777 2503 169 43 36 chrX 25200938 25201593 -141448703 - ETnERV2-int LTR ERVK -4271 3135 1934 2 777 1446 149 18 18 chrX 25201614 25201900 -141448396 - ETnERV2-int LTR ERVK -5321 2085 1800 2 777 1357 267 34 7 chrX 25202147 25202562 -141447734 + MuRRS4-int LTR ERV1 1019 1444 -3619 2 777 288 237 53 101 chrX 25202584 25202623 -141447673 + MuRRS4-int LTR ERV1 1610 1648 -3042 2 777 459 0 0 0 chrX 25202623 25202674 -141447622 + (GA)n Simple_repeat Simple_repeat 1 51 0 2 777 816 86 1 9 chrX 25202674 25202811 -141447485 + MuRRS4-int LTR ERV1 1649 1845 -3218 2 777 4987 157 67 15 chrX 25202823 25204901 -141445395 + MuRRS4-int LTR ERV1 2008 4271 -792 2 777 646 223 0 6 chrX 25204892 25205050 -141445246 + MuRRS4-int LTR ERV1 4788 4944 -119 2 777 1006 280 0 7 chrX 25205041 25205343 -141444953 + MuRRS4-int LTR ERV1 4636 4935 -128 2 777 2816 334 31 41 chrX 25205925 25207537 -141442759 + RodERV21-int LTR ERV1 2905 4500 -491 2 777 2428 117 40 61 chrX 25207537 25207964 -141442332 + RLTR9B2 LTR ERVK 3 420 0 2 777 2816 334 31 41 chrX 25207964 25208259 -141442037 + RodERV21-int LTR ERV1 4501 4793 -198 2 777 884 127 0 72 chrX 25208706 25208859 -141441437 + B1_Mus1 SINE Alu 7 148 0 2 777 823 259 42 111 chrX 25208942 25209595 -141440701 + L1Md_F2 LINE L1 217 1040 -5684 2 777 30543 60 4 5 chrX 25209593 25213816 -141436480 + L1Md_F2 LINE L1 1367 5586 -297 2 777 7374 67 22 0 chrX 25213817 25214779 -141435517 + L1Md_F2 LINE L1 5588 6570 -12 2 777 1150 213 84 48 chrX 25214779 25215208 -141435088 + RLTR21 LTR ERVK 707 1254 -150 2 777 2422 95 6 3 chrX 25215446 25215805 -141434491 - BGLII LTR ERVK 0 421 62 2 777 2531 213 101 8 chrX 25215812 25216642 -141433654 - MYSERV16_I-int LTR ERVK -112 2214 1308 2 777 2096 201 84 80 chrX 25216645 25216999 -141433297 - RMER3D-int LTR ERVK -1148 1694 1384 2 777 3255 51 2 0 chrX 25216999 25217394 -141432902 + MTA_Mm LTR MaLR 1 396 0 2 777 2096 201 84 80 chrX 25217394 25217715 -141432581 - RMER3D-int LTR ERVK -1459 1383 1016 2 777 448 184 0 72 chrX 25217761 25217954 -141432342 + CT-rich Low_complexity Low_complexity 2 180 0 2 777 399 190 13 0 chrX 25217972 25218051 -141432245 - RMER3D-int LTR ERVK -2274 568 489 2 777 543 186 16 35 chrX 25218123 25218270 -141432026 - RMER3D-int LTR ERVK -2069 773 650 2 777 594 211 80 25 chrX 25218316 25218562 -141431734 - RMER3D-int LTR ERVK -1993 849 652 2 777 417 133 0 0 chrX 25218580 25218665 -141431631 - RMER3D-int LTR ERVK -2278 564 489 2 777 1678 271 42 28 chrX 25218930 25219504 -141430792 - Lx7 LINE L1 -1042 6654 6073 2 777 603 266 51 29 chrX 25219542 25219817 -141430479 - Lx7 LINE L1 -1559 6137 5857 2 777 250 143 0 31 chrX 25219828 25219893 -141430403 + (TA)n Simple_repeat Simple_repeat 1 63 0 2 777 583 288 51 6 chrX 25220139 25220317 -141429979 + B3A SINE B2 1 186 -12 2 777 231 36 0 0 chrX 25220409 25220437 -141429859 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 2 777 826 283 10 0 chrX 25220521 25220726 -141429570 - B3 SINE B2 -9 207 1 2 777 1052 267 82 0 chrX 25221146 25221438 -141428858 - MER2 DNA MER2_type -24 321 6 2 777 852 161 62 19 chrX 25221603 25221812 -141428484 + L1_Mm LINE L1 5234 5451 -432 2 777 2144 251 52 58 chrX 25221859 25222979 -141427317 + L1_Mus1 LINE L1 217 1205 -5433 2 777 25534 130 14 59 chrX 25222975 25228779 -141421517 + L1_Mus1 LINE L1 1070 6567 0 2 777 4611 168 17 5 chrX 25228789 25229602 -141420694 + Lx2 LINE L1 5823 6645 -352 2 777 1242 174 18 0 chrX 25229597 25229815 -141420481 + Lx2 LINE L1 6770 6991 -6 2 777 386 225 38 29 chrX 25230107 25230212 -141420084 - ID_B1 SINE B4 -2 222 117 2 777 6171 188 38 9 chrX 25230212 25231736 -141418560 - Lx3C LINE L1 -57 6919 5353 2 777 10666 181 30 13 chrX 25231748 25234746 -141415550 + Lx4A LINE L1 3725 6779 -279 2 777 235 354 0 0 chrX 25234795 25234877 -141415419 - RMER1C Other Other -666 676 595 2 777 444 385 34 29 chrX 25235078 25235661 -141414635 - RMER1C Other Other -464 878 362 2 777 438 423 12 0 chrX 25235724 25235972 -141414324 - RMER1C Other Other -671 671 421 2 777 403 401 26 19 chrX 25236249 25236513 -141413783 - RMER1C Other Other -613 729 464 2 777 436 420 11 27 chrX 25236608 25236973 -141413323 - RMER1C Other Other -475 867 509 2 777 299 425 39 48 chrX 25237445 25237987 -141412309 - RMER1C Other Other -505 837 378 2 777 301 396 36 36 chrX 25238620 25238814 -141411482 - RMER1C Other Other -581 761 568 2 777 459 422 25 27 chrX 25238921 25239467 -141410829 - RMER1C Other Other -496 846 379 2 777 717 23 0 0 chrX 25239831 25239918 -141410378 + (CA)n Simple_repeat Simple_repeat 2 88 0 2 777 243 0 0 0 chrX 25239918 25239944 -141410352 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 777 584 393 38 30 chrX 25240059 25240861 -141409435 - RMER1C Other Other -460 882 375 2 777 371 422 25 24 chrX 25241365 25242015 -141408281 - RMER1C Other Other -457 885 487 2 777 237 420 0 0 chrX 25242381 25242550 -141407746 - RMER1C Other Other -625 717 549 2 777 3511 172 9 5 chrX 25243450 25244100 -141406196 + L1Md_F2 LINE L1 441 1093 -5631 2 777 2642 102 0 8 chrX 25244096 25244493 -141405803 + L1Md_F2 LINE L1 1977 2370 -3513 2 777 20705 70 0 2 chrX 25244504 25247245 -141403051 + L1Md_F2 LINE L1 2850 5585 -298 2 777 7849 58 4 0 chrX 25247246 25248238 -141402058 + L1Md_F2 LINE L1 5587 6582 0 2 777 3898 77 5 0 chrX 25248238 25249067 -141401229 + L1Md_Gf LINE L1 833 1762 -4124 2 777 865 106 35 21 chrX 25249071 25249216 -141401080 - L1_Mus1 LINE L1 0 6567 6421 2 777 270 308 57 71 chrX 25249496 25249779 -141400517 - RMER17C LTR ERVK -49 361 83 2 777 5722 136 6 28 chrX 25250243 25251211 -141399085 + Lx3A LINE L1 6028 6974 -7 2 777 205 333 62 37 chrX 25252526 25252688 -141397608 + L2 LINE L2 1494 1659 -1760 2 777 181 347 52 10 chrX 25253051 25253147 -141397149 + L2 LINE L2 1926 2025 -1394 2 777 548 331 39 7 chrX 25253161 25253316 -141396980 - B4A SINE B4 -2 290 131 2 777 228 86 0 0 chrX 25253414 25253449 -141396847 + (TGG)n Simple_repeat Simple_repeat 1 35 0 2 777 318 341 112 30 chrX 25253545 25253778 -141396518 + L2 LINE L2 2049 2300 -1119 2 777 4586 133 13 19 chrX 25253784 25254580 -141395716 + YREP_Mm Unknown Unknown 987 1777 -35 2 777 419 308 0 0 chrX 25255425 25255529 -141394767 + B3 SINE B2 98 201 -15 2 777 384 252 75 8 chrX 25255589 25255709 -141394587 + B1F SINE Alu 21 148 -1 2 777 966 231 19 0 chrX 25255855 25256067 -141394229 + B3 SINE B2 1 216 0 2 777 642 316 95 37 chrX 25256296 25256569 -141393727 + B4A SINE B4 4 292 0 2 777 17344 176 36 48 chrX 25256697 25259385 -141390911 + L1VL2 LINE L1 300 2807 -3076 2 777 1011 97 0 0 chrX 25259385 25259519 -141390777 + B1_Mus2 SINE Alu 1 134 -13 2 777 381 58 0 0 chrX 25259528 25259580 -141390716 + (TAA)n Simple_repeat Simple_repeat 2 53 0 2 777 17344 160 19 36 chrX 25259580 25261541 -141388755 + L1VL2 LINE L1 2809 4755 -1128 2 777 5175 143 19 1 chrX 25261542 25262389 -141387907 + Lx LINE L1 5787 6648 -6 2 777 24 67 0 0 chrX 25262391 25262436 -141387860 + AT_rich Low_complexity Low_complexity 1 45 0 2 777 21 82 0 0 chrX 25262482 25262531 -141387765 + AT_rich Low_complexity Low_complexity 1 49 0 2 777 570 51 0 0 chrX 25263665 25263743 -141386553 + (TC)n Simple_repeat Simple_repeat 2 79 0 2 777 363 23 0 0 chrX 25263744 25263788 -141386508 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 777 24 0 0 0 chrX 25264066 25264090 -141386206 + AT_rich Low_complexity Low_complexity 1 24 0 2 777 254 278 134 60 chrX 25264090 25264224 -141386072 + B1F SINE Alu 4 147 -2 2 777 242 274 100 36 chrX 25264239 25264349 -141385947 + B1F SINE Alu 1 117 -32 2 777 752 295 44 24 chrX 25265129 25265334 -141384962 - B3 SINE B2 -6 210 2 2 777 940 126 7 0 chrX 25265591 25265734 -141384562 - B1_Mus1 SINE Alu -1 147 4 2 777 369 261 160 10 chrX 25265735 25265935 -141384361 - B4 SINE B4 -62 230 1 2 777 180 0 0 0 chrX 25266198 25266218 -141384078 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2 777 214 365 0 0 chrX 25266517 25266569 -141383727 + ID4 SINE ID 4 55 -28 2 777 21 36 0 0 chrX 25266582 25266610 -141383686 + AT_rich Low_complexity Low_complexity 1 28 0 2 777 321 322 49 8 chrX 25266858 25266980 -141383316 - B1F SINE Alu -3 146 20 2 777 25200 148 6 2 chrX 25267230 25272398 -141377898 + L1_Mus3 LINE L1 1445 6634 -4 2 777 231 114 0 0 chrX 25272826 25272861 -141377435 + (A)n Simple_repeat Simple_repeat 1 35 0 2 777 355 253 24 0 chrX 25273030 25273113 -141377183 + RMER12 LTR ERVK 767 851 -471 2 777 207 0 0 0 chrX 25273113 25273136 -141377160 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 777 504 0 0 0 chrX 25273135 25273191 -141377105 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 777 279 281 24 35 chrX 25273759 25273844 -141376452 + B4A SINE B4 82 165 -127 2 777 233 364 22 11 chrX 25274771 25274860 -141375436 - B3 SINE B2 -14 202 113 2 777 446 305 65 13 chrX 25274945 25275098 -141375198 - B3 SINE B2 -53 163 3 2 777 351 0 0 0 chrX 25275182 25275221 -141375075 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 777 7111 112 9 2 chrX 25275338 25277118 -141373178 - L1_Mus1 LINE L1 0 6567 4773 2 777 7368 77 3 11 chrX 25277106 25278292 -141372004 - L1Md_F2 LINE L1 0 6582 5405 2 777 16926 154 11 17 chrX 25278290 25281628 -141368668 - L1_Mus1 LINE L1 -1075 4808 1492 2 777 6329 154 28 13 chrX 25281626 25282959 -141367337 - L1_Mus3 LINE L1 -690 5948 4601 2 777 392 193 22 11 chrX 25282972 25283061 -141367235 - URR1B DNA MER1_type 0 225 136 2 777 24 32 0 0 chrX 25283165 25283196 -141367100 + AT_rich Low_complexity Low_complexity 1 31 0 2 777 2730 245 22 16 chrX 25283336 25284329 -141365967 - Lx6 LINE L1 -1352 6108 5105 2 777 1094 223 37 9 chrX 25284334 25284660 -141365636 - Lx6 LINE L1 -2035 3845 3511 2 777 583 239 72 38 chrX 25284660 25284822 -141365474 - Lx6 LINE L1 -3397 2480 2324 2 777 531 0 0 0 chrX 25284822 25284881 -141365415 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 777 583 239 72 38 chrX 25284881 25284927 -141365369 - Lx6 LINE L1 -3554 2323 2267 2 777 633 307 60 28 chrX 25284933 25285151 -141365145 - ORR1D2 LTR MaLR -145 225 1 2 777 418 386 4 0 chrX 25285153 25285386 -141364910 + Lx8 LINE L1 6956 7189 -284 2 777 974 281 47 22 chrX 25285493 25285853 -141364443 + ORR1D2 LTR MaLR 1 369 -1 2 777 455 256 8 8 chrX 25286008 25286130 -141364166 + Lx8 LINE L1 6640 6761 -712 2 777 301 362 0 0 chrX 25286991 25287107 -141363189 + RMER1C Other Other 537 652 -690 2 777 405 38 49 24 chrX 25287863 25287945 -141362351 + (CAAAAA)n Simple_repeat Simple_repeat 1 84 0 3 777 10331 115 6 8 chrX 25288741 25291254 -141359042 - L1Md_A LINE L1 -3185 2698 233 3 777 278 431 17 11 chrX 25293003 25293350 -141356946 + RMER1C Other Other 487 835 -507 3 777 443 391 40 17 chrX 25293854 25294200 -141356096 + RMER1C Other Other 521 874 -468 3 777 360 0 0 0 chrX 25294771 25294811 -141355485 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 777 230 406 0 0 chrX 25295500 25295628 -141354668 + RMER1C Other Other 631 758 -584 3 777 267 387 47 10 chrX 25295832 25296025 -141354271 + RMER1C Other Other 462 661 -681 3 97 238 407 29 28 chrX 25296843 25297188 -141353108 + RMER1C Other Other 494 837 -505 3 778 235 447 4 8 chrX 25297658 25297897 -141352399 + RMER1C Other Other 546 783 -559 3 778 259 405 26 22 chrX 25298119 25298346 -141351950 + RMER1C Other Other 464 691 -651 3 778 22 0 0 0 chrX 25298487 25298509 -141351787 + AT_rich Low_complexity Low_complexity 1 22 0 3 778 279 432 16 4 chrX 25298665 25298909 -141351387 + RMER1C Other Other 499 745 -597 3 778 296 394 44 23 chrX 25299109 25299623 -141350673 + RMER1C Other Other 466 865 -477 3 778 9909 185 28 9 chrX 25299887 25302877 -141347419 - Lx4A LINE L1 -279 6779 3725 3 778 5767 185 46 12 chrX 25302889 25304411 -141345885 + Lx3C LINE L1 5353 6919 -57 3 778 362 245 39 19 chrX 25304411 25304515 -141345781 + ID_B1 SINE B4 117 222 -2 3 778 1148 179 18 0 chrX 25304801 25305019 -141345277 - Lx2 LINE L1 -6 6991 6770 3 778 4226 172 19 5 chrX 25305014 25305826 -141344470 - Lx2 LINE L1 -352 6645 5823 3 778 24318 131 12 59 chrX 25305838 25311638 -141338658 - L1_Mus1 LINE L1 0 6567 1071 3 778 2045 208 11 0 chrX 25311635 25312111 -141338185 - L1_Mus1 LINE L1 -5411 1205 725 3 778 479 222 16 8 chrX 25312120 25312247 -141338049 - L1_Mus1 LINE L1 -5814 802 675 3 778 527 295 23 100 chrX 25312278 25312756 -141337540 - L1VL1 LINE L1 -5941 477 57 3 778 829 192 48 5 chrX 25312802 25313011 -141337285 - L1_Mm LINE L1 -432 5451 5234 3 778 976 277 82 0 chrX 25313176 25313468 -141336828 + MER2 DNA MER2_type 6 321 -24 3 778 793 288 10 0 chrX 25313888 25314093 -141336203 + B3 SINE B2 1 207 -9 3 778 447 19 0 0 chrX 25314177 25314229 -141336067 + (TTCC)n Simple_repeat Simple_repeat 3 54 0 3 778 658 284 39 78 chrX 25314293 25314499 -141335797 - B3A SINE B2 0 198 1 3 778 556 93 0 20 chrX 25314745 25314844 -141335452 + (TA)n Simple_repeat Simple_repeat 2 98 0 3 778 631 258 51 29 chrX 25314855 25315130 -141335166 + Lx7 LINE L1 5857 6137 -1559 3 778 1761 264 42 28 chrX 25315168 25315742 -141334554 + Lx7 LINE L1 6073 6654 -1042 3 778 443 127 0 0 chrX 25316007 25316092 -141334204 + RMER3D-int LTR ERVK 489 564 -2278 3 778 608 191 63 31 chrX 25316110 25316356 -141333940 + RMER3D-int LTR ERVK 652 849 -1993 3 778 543 186 16 35 chrX 25316401 25316548 -141333748 + RMER3D-int LTR ERVK 650 773 -2069 3 778 411 177 13 0 chrX 25316620 25316699 -141333597 + RMER3D-int LTR ERVK 489 568 -2274 3 778 308 338 101 0 chrX 25316717 25316856 -141333440 + HAL1-3A_ME LINE L1 2286 2438 -420 3 778 185 92 136 15 chrX 25316857 25316923 -141333373 + GA-rich Low_complexity Low_complexity 2 75 0 3 778 1541 199 8 26 chrX 25316969 25317290 -141333006 + RMER3D-int LTR ERVK 1016 1383 -1459 3 778 3292 43 2 0 chrX 25317290 25317685 -141332611 - MTA_Mm LTR MaLR 0 396 1 3 778 1541 199 8 33 chrX 25317685 25317842 -141332454 + RMER3D-int LTR ERVK 1384 1533 -1309 3 778 501 221 46 40 chrX 25317869 25318020 -141332276 + RMER3D-int LTR ERVK 1527 1678 -1164 3 778 2419 219 42 56 chrX 25318044 25318877 -141331419 + RMER3D-int LTR ERVK 1927 2747 -95 3 778 2370 106 6 3 chrX 25318881 25319240 -141331056 + BGLII LTR ERVK 62 421 0 3 778 1137 223 80 42 chrX 25319478 25319907 -141330389 - RLTR21 LTR ERVK -150 1254 706 3 778 34370 60 6 10 chrX 25319907 25326497 -141323799 - L1Md_F2 LINE L1 -13 6569 2 3 778 4916 132 29 13 chrX 25326496 25328191 -141322105 - L1Md_F LINE L1 -3885 1998 277 3 778 1363 175 52 0 chrX 25328191 25328442 -141321854 - L1VL1 LINE L1 -6156 266 3 3 778 20703 137 6 3 chrX 25328443 25329280 -141321016 + L1_Mus1 LINE L1 2294 3132 -2751 3 778 207 0 0 0 chrX 25329280 25329303 -141320993 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 778 20703 128 5 3 chrX 25329303 25332298 -141317998 + L1_Mus1 LINE L1 3133 6136 -431 3 778 1145 82 0 0 chrX 25332298 25332456 -141317840 + L1_Mus1 LINE L1 6410 6567 0 3 778 1046 209 23 33 chrX 25332458 25332764 -141317532 + L1_Mur2 LINE L1 3320 3622 -2255 3 778 9027 1 0 0 chrX 25332805 25333736 -141316560 + L1Md_A LINE L1 5652 6582 0 3 778 225 139 47 0 chrX 25333737 25333780 -141316516 + L1_Mur2 LINE L1 3699 3743 -2134 3 778 925 320 45 30 chrX 25333755 25334190 -141316106 - Lx6 LINE L1 -164 7296 6506 3 778 398 269 22 7 chrX 25334195 25334330 -141315966 - L1_Mur2 LINE L1 -1407 4470 4334 3 778 24 0 0 0 chrX 25334615 25334639 -141315657 + AT_rich Low_complexity Low_complexity 1 24 0 3 778 225 0 0 0 chrX 25336032 25336057 -141314239 + (CTTTG)n Simple_repeat Simple_repeat 3 27 0 3 778 1491 137 21 4 chrX 25336546 25336788 -141313508 - L1_Mus4 LINE L1 0 6636 6391 3 778 835 177 198 0 chrX 25336830 25337073 -141313223 + L1_Mur2 LINE L1 3805 4095 -1782 3 778 9761 141 46 26 chrX 25337073 25337520 -141312776 + RLTR22_Mur LTR ERVK 1 444 -1404 3 778 457 55 0 27 chrX 25337520 25337595 -141312701 + (CTA)n Simple_repeat Simple_repeat 3 75 0 3 778 9761 141 46 26 chrX 25337595 25338960 -141311336 + RLTR22_Mur LTR ERVK 445 1847 -1 3 778 2971 181 32 2 chrX 25338960 25339552 -141310744 + L1_Mur2 LINE L1 4092 4701 -1176 3 778 780 265 19 14 chrX 25339588 25339802 -141310494 - Lx4B LINE L1 -35 7023 6809 3 778 253 193 0 66 chrX 25339810 25339871 -141310425 + T-rich Low_complexity Low_complexity 4 60 0 3 778 26 50 0 0 chrX 25339939 25339979 -141310317 + AT_rich Low_complexity Low_complexity 1 40 0 3 778 2087 164 31 0 chrX 25339992 25340351 -141309945 - L1_Mus3 LINE L1 -8 6630 6261 3 778 667 225 35 14 chrX 25340359 25340503 -141309793 - B1_Mur2 SINE Alu -2 147 1 3 778 285 29 0 0 chrX 25340515 25340549 -141309747 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 3 778 529 268 14 7 chrX 25340564 25340707 -141309589 - Lx5 LINE L1 -82 6968 6825 3 778 354 242 0 0 chrX 25340711 25340802 -141309494 - Lx9 LINE L1 -2 7642 7552 3 778 667 250 68 11 chrX 25340800 25340990 -141309306 + Lx9 LINE L1 7201 7401 -243 3 778 24 67 0 0 chrX 25341801 25341846 -141308450 + AT_rich Low_complexity Low_complexity 1 45 0 3 778 315 0 0 0 chrX 25342522 25342557 -141307739 + (TTA)n Simple_repeat Simple_repeat 2 36 0 3 778 583 289 52 44 chrX 25342748 25342810 -141307486 - RLTR40 LTR ERVK 0 817 753 3 778 6634 90 31 2 chrX 25342810 25343261 -141307035 + RLTR13B1 LTR ERVK 1 469 -424 3 778 396 0 0 0 chrX 25343261 25343305 -141306991 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 778 6634 90 31 2 chrX 25343305 25343721 -141306575 + RLTR13B1 LTR ERVK 470 892 -1 3 778 583 289 52 44 chrX 25343721 25343908 -141306388 - RLTR40 LTR ERVK -65 752 566 3 778 467 144 10 0 chrX 25343908 25344005 -141306291 + CT-rich Low_complexity Low_complexity 2 99 0 3 778 1846 222 57 34 chrX 25344007 25344530 -141305766 - RLTR40 LTR ERVK -261 556 22 3 778 3445 205 50 18 chrX 25345985 25346726 -141303570 + RLTR14-int LTR ERV1 2436 3200 -2117 3 778 779 195 0 0 chrX 25346757 25346880 -141303416 - MMETn-int LTR ERVK -745 6661 6539 3 778 3084 172 17 43 chrX 25346875 25347789 -141302507 - MMETn-int LTR ERVK -1703 3141 2541 3 778 203 0 0 36 chrX 25347792 25347820 -141302476 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 3 778 4698 72 5 7 chrX 25347829 25347846 -141302450 - L1Md_F2 LINE L1 -3 6579 6560 3 778 3954 36 0 0 chrX 25347846 25348284 -141302012 - L1Md_T LINE L1 0 6582 6145 3 778 4698 75 5 7 chrX 25348284 25348889 -141301407 - L1Md_F2 LINE L1 -23 6559 5954 3 778 362 176 286 0 chrX 25348889 25348980 -141301316 - MMETn-int LTR ERVK -2298 2546 2473 3 778 6903 95 1 7 chrX 25349032 25349974 -141300322 + L1Md_F LINE L1 90 1025 -5494 3 778 18719 90 41 7 chrX 25349975 25353290 -141297006 + L1Md_F LINE L1 315 3747 -2136 3 778 358 306 62 81 chrX 25353311 25353631 -141296665 + RLTR14-int LTR ERV1 3743 4056 -3035 3 778 207 0 0 0 chrX 25353791 25353814 -141296482 + (T)n Simple_repeat Simple_repeat 1 23 0 3 778 713 253 58 29 chrX 25354449 25354692 -141295604 + LTRIS4 LTR ERV1 276 519 0 3 778 580 256 53 81 chrX 25354694 25355244 -141295052 + MuRRS4-int LTR ERV1 5 498 -4565 3 778 1259 235 65 22 chrX 25355585 25355907 -141294389 + MuRRS4-int LTR ERV1 340 675 -4388 3 778 4373 135 23 3 chrX 25355927 25356610 -141293686 + RMER16-int LTR ERVK 665 1361 -4045 3 778 412 212 9 66 chrX 25356709 25356815 -141293481 + RMER16-int LTR ERVK 1349 1448 -3958 3 778 569 139 111 17 chrX 25356799 25356916 -141293380 + MuRRS4-int LTR ERV1 750 877 -4186 3 778 699 266 16 74 chrX 25356916 25357172 -141293124 - LSU-rRNA_Hsa rRNA rRNA -1371 3664 3424 3 778 1604 258 113 6 chrX 25357275 25357743 -141292553 + MuRRS4-int LTR ERV1 929 1446 -3617 3 778 999 102 9 84 chrX 25357765 25357980 -141292316 + MuRRS4-int LTR ERV1 1104 1302 -1997 3 778 1716 146 12 0 chrX 25357990 25358243 -141292053 + MuRRS4-int LTR ERV1 1936 2191 -2872 3 778 828 197 0 6 chrX 25358366 25358524 -141291772 + MuRRS4-int LTR ERV1 4788 4944 -119 3 778 1137 284 0 6 chrX 25358515 25358827 -141291469 + MuRRS4-int LTR ERV1 4636 4945 -118 3 778 551 279 63 89 chrX 25359195 25359589 -141290707 + RodERV21-int LTR ERV1 2702 3085 -1906 3 778 35638 52 1 3 chrX 25359876 25365332 -141284964 + L1Md_T LINE L1 53 5589 -297 3 778 8879 37 1 0 chrX 25365332 25366325 -141283971 + L1Md_T LINE L1 5590 6583 -2 3 778 333 0 0 0 chrX 25366328 25366365 -141283931 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 3 778 3049 324 33 26 chrX 25366372 25367505 -141282791 + RodERV21-int LTR ERV1 3359 4500 -491 3 778 2689 126 35 58 chrX 25367505 25367935 -141282361 + RLTR9B2 LTR ERVK 1 420 0 3 778 3049 324 33 26 chrX 25367935 25368226 -141282070 + RodERV21-int LTR ERV1 4501 4793 -198 3 778 807 172 7 46 chrX 25368670 25368822 -141281474 + B1_Mm SINE Alu 2 147 0 3 778 291 196 107 10 chrX 25368962 25369065 -141281231 + L1_Rod LINE L1 5260 5372 -475 3 778 2163 200 78 42 chrX 25369065 25369619 -141280677 - RLTR31A_Mm LTR ERVK 0 584 11 3 778 438 241 24 65 chrX 25369619 25369788 -141280508 + L1_Rod LINE L1 5381 5542 -305 3 778 242 161 35 35 chrX 25369947 25370005 -141280291 + CT-rich Low_complexity Low_complexity 2 59 0 3 778 7389 72 5 9 chrX 25371331 25372650 -141277646 - L1Md_F2 LINE L1 -2 6580 5272 3 778 646 187 0 8 chrX 25372649 25372773 -141277523 + L1_Mus3 LINE L1 5978 6100 -538 3 778 2340 68 62 3 chrX 25372773 25373095 -141277201 + ORR1A1 LTR MaLR 1 341 -5 3 778 3404 134 27 9 chrX 25373100 25373627 -141276669 + L1_Mus3 LINE L1 6096 6631 -7 3 778 1115 203 28 7 chrX 25373628 25373911 -141276385 + L1_Mur3 LINE L1 2999 3287 -2593 3 778 1646 270 22 28 chrX 25373918 25374213 -141276083 + Lx6 LINE L1 5607 5903 -1557 3 778 2212 198 17 14 chrX 25374213 25374633 -141275663 + MTC LTR MaLR 1 421 0 3 778 1646 270 22 28 chrX 25374633 25374875 -141275421 + Lx6 LINE L1 5904 6141 -1319 3 778 248 316 0 17 chrX 25374867 25374983 -141275313 + Lx6 LINE L1 7332 7445 -15 3 778 1472 226 18 39 chrX 25375366 25375697 -141274599 + RLTR21 LTR ERVK 1 324 -1248 3 778 832 142 11 56 chrX 25375738 25375917 -141274379 + RLTR21 LTR ERVK 547 717 -855 3 778 13938 113 5 20 chrX 25375920 25378701 -141271595 + L1Md_F2 LINE L1 446 3165 -2718 3 778 9965 96 0 3 chrX 25378685 25380050 -141270246 + L1Md_F2 LINE L1 4226 5586 -297 3 778 7683 82 9 2 chrX 25380051 25381027 -141269269 + L1Md_F2 LINE L1 5588 6570 -12 3 778 1193 204 72 60 chrX 25381027 25381428 -141268868 + RLTR21 LTR ERVK 707 1112 -460 3 778 3070 92 17 2 chrX 25381637 25382052 -141268244 - BGLII LTR ERVK 0 421 1 3 778 3129 207 109 8 chrX 25382052 25382996 -141267300 - MYSERV16_I-int LTR ERVK 0 2326 1288 3 778 2414 199 89 80 chrX 25382977 25383333 -141266963 - RMER3D-int LTR ERVK -1146 1696 1386 3 778 3519 43 2 0 chrX 25383333 25383728 -141266568 + MTA_Mm LTR MaLR 1 396 0 3 778 2414 199 88 75 chrX 25383728 25384071 -141266225 - RMER3D-int LTR ERVK -1457 1385 1014 3 778 481 116 80 27 chrX 25384093 25384243 -141266053 + CT-rich Low_complexity Low_complexity 3 160 0 3 778 558 227 64 29 chrX 25384245 25384600 -141265696 - RMER3D-int LTR ERVK -2036 806 354 3 778 655 218 80 25 chrX 25384621 25384867 -141265429 - RMER3D-int LTR ERVK -1993 849 652 3 778 468 159 0 0 chrX 25384882 25384970 -141265326 - RMER3D-int LTR ERVK -2278 564 489 4 778 1862 279 47 21 chrX 25385234 25385813 -141264483 - Lx7 LINE L1 -1042 6654 6061 4 778 740 255 48 26 chrX 25385853 25386123 -141264173 - Lx7 LINE L1 -1564 6132 5857 4 778 450 0 0 0 chrX 25386134 25386184 -141264112 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 778 657 249 44 78 chrX 25386205 25386410 -141263886 + B3A SINE B2 1 198 0 4 778 597 80 0 0 chrX 25386472 25386560 -141263736 + (GGAA)n Simple_repeat Simple_repeat 3 90 0 4 778 903 283 10 0 chrX 25386642 25386847 -141263449 - B3 SINE B2 -9 207 1 4 778 967 280 84 0 chrX 25387257 25387553 -141262743 - MER2 DNA MER2_type -24 321 1 4 778 997 160 62 14 chrX 25387715 25387924 -141262372 + L1_Mm LINE L1 5235 5453 -430 4 778 25142 143 12 76 chrX 25387956 25394196 -141256100 + L1_Mus1 LINE L1 261 5937 -630 4 778 37439 31 2 6 chrX 25394211 25400402 -141249894 - L1Md_T LINE L1 0 6582 423 4 778 4477 100 5 5 chrX 25400402 25401046 -141249250 + L1_Mus1 LINE L1 5924 6567 0 4 778 4215 178 44 5 chrX 25401059 25402052 -141248244 + Lx2 LINE L1 5822 6957 -43 4 778 6004 189 36 7 chrX 25402058 25403626 -141246670 - Lx3C LINE L1 -12 6964 5353 4 778 9930 186 29 8 chrX 25403638 25406624 -141243672 + Lx4A LINE L1 3725 6779 -279 4 778 296 394 44 23 chrX 25406888 25407402 -141242894 - RMER1C Other Other -477 865 466 4 778 279 432 16 4 chrX 25407602 25407846 -141242450 - RMER1C Other Other -597 745 499 4 778 22 0 0 0 chrX 25408002 25408024 -141242272 + AT_rich Low_complexity Low_complexity 1 22 0 4 778 245 410 26 22 chrX 25408165 25408392 -141241904 - RMER1C Other Other -651 691 464 4 778 270 439 4 8 chrX 25408614 25408853 -141241443 - RMER1C Other Other -559 783 546 4 778 253 381 18 10 chrX 25409511 25409668 -141240628 - RMER1C Other Other -584 758 494 4 778 249 393 47 10 chrX 25410486 25410679 -141239617 - RMER1C Other Other -681 661 462 4 778 240 429 29 26 chrX 25410919 25411340 -141238956 - RMER1C Other Other -509 833 412 4 778 342 0 0 0 chrX 25411700 25411738 -141238558 + (TA)n Simple_repeat Simple_repeat 1 38 0 4 778 420 394 40 17 chrX 25412309 25412655 -141237641 - RMER1C Other Other -468 874 521 4 778 278 431 17 11 chrX 25413159 25413506 -141236790 - RMER1C Other Other -507 835 487 4 778 10333 115 6 7 chrX 25415257 25417768 -141232528 + L1Md_A LINE L1 233 2698 -3185 4 778 513 33 43 21 chrX 25418562 25418656 -141231640 + (TTTTTG)n Simple_repeat Simple_repeat 1 96 0 4 778 301 362 0 0 chrX 25419412 25419528 -141230768 - RMER1C Other Other -690 652 537 4 778 226 445 0 0 chrX 25419851 25419988 -141230308 - RMER1C Other Other -670 672 536 4 778 455 256 8 8 chrX 25420389 25420511 -141229785 - Lx8 LINE L1 -712 6761 6640 4 778 961 291 42 17 chrX 25420666 25421026 -141229270 - ORR1D2 LTR MaLR -1 369 1 4 778 375 393 4 0 chrX 25421133 25421367 -141228929 - Lx8 LINE L1 -283 7190 6956 4 778 645 307 60 28 chrX 25421369 25421587 -141228709 + ORR1D2 LTR MaLR 1 225 -145 4 778 555 244 72 38 chrX 25421593 25421639 -141228657 + Lx6 LINE L1 2265 2310 -3567 4 778 621 0 0 0 chrX 25421639 25421708 -141228588 + (GA)n Simple_repeat Simple_repeat 2 70 0 4 778 555 244 72 38 chrX 25421708 25421870 -141228426 + Lx6 LINE L1 2311 2479 -3398 4 778 1121 220 37 9 chrX 25421870 25422196 -141228100 + Lx6 LINE L1 3511 3845 -2035 4 778 2730 244 22 14 chrX 25422201 25423193 -141227103 + Lx6 LINE L1 5105 6108 -1352 4 778 24 32 0 0 chrX 25423333 25423364 -141226932 + AT_rich Low_complexity Low_complexity 1 31 0 4 778 392 193 22 11 chrX 25423468 25423557 -141226739 + URR1B DNA MER1_type 136 225 0 4 778 6329 154 28 13 chrX 25423570 25424903 -141225393 + L1_Mus3 LINE L1 4601 5948 -690 4 97 16810 154 11 21 chrX 25424901 25428253 -141222043 + L1_Mus1 LINE L1 1492 4808 -1075 4 779 1297 78 17 0 chrX 25428251 25428430 -141221866 + L1Md_F2 LINE L1 5405 5586 -297 4 779 7290 78 2 13 chrX 25428431 25429437 -141220859 + L1Md_F2 LINE L1 5588 6582 0 4 779 6803 108 8 2 chrX 25429442 25431205 -141219091 + L1_Mus1 LINE L1 4795 6567 0 4 779 387 0 0 0 chrX 25431330 25431373 -141218923 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 779 473 298 65 13 chrX 25431457 25431610 -141218686 + B3 SINE B2 3 163 -53 4 779 224 284 0 69 chrX 25431619 25431691 -141218605 + B4A SINE B4 87 153 -139 4 779 246 352 22 11 chrX 25431695 25431784 -141218512 + B3 SINE B2 113 202 -14 4 779 266 293 24 35 chrX 25432711 25432796 -141217500 - B4A SINE B4 -127 165 82 4 779 1041 139 0 0 chrX 25433365 25433538 -141216758 + (TA)n Simple_repeat Simple_repeat 1 173 0 4 779 222 118 0 0 chrX 25433729 25433763 -141216533 + (T)n Simple_repeat Simple_repeat 1 34 0 4 779 8925 129 8 3 chrX 25434191 25436472 -141213824 - L1_Mus3 LINE L1 -4 6634 4343 4 779 5986 191 23 8 chrX 25436469 25438603 -141211693 + Lx4A LINE L1 4605 6779 -279 4 779 279 379 35 31 chrX 25438969 25439381 -141210915 - RMER1C Other Other -477 865 437 4 779 333 432 12 0 chrX 25439581 25439833 -141210463 - RMER1C Other Other -523 819 565 4 779 357 398 26 19 chrX 25440105 25440369 -141209927 - RMER1C Other Other -613 729 464 4 779 324 420 11 27 chrX 25440464 25440829 -141209467 - RMER1C Other Other -475 867 509 4 779 252 411 17 11 chrX 25441491 25441668 -141208628 - RMER1C Other Other -691 651 474 4 779 262 402 44 6 chrX 25442477 25442657 -141207639 - RMER1C Other Other -766 576 419 4 779 263 427 27 16 chrX 25442789 25443280 -141207016 - RMER1C Other Other -478 864 379 4 779 369 0 0 0 chrX 25443688 25443729 -141206567 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 779 477 0 0 0 chrX 25443729 25443781 -141206515 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 779 645 402 38 32 chrX 25443896 25444696 -141205600 - RMER1C Other Other -460 882 375 4 779 372 423 28 28 chrX 25445178 25445852 -141204444 - RMER1C Other Other -460 882 487 4 779 237 420 0 0 chrX 25446217 25446386 -141203910 - RMER1C Other Other -625 717 549 4 779 3589 167 8 3 chrX 25447285 25447932 -141202364 + L1Md_F2 LINE L1 441 1090 -5634 4 779 2684 95 0 3 chrX 25447935 25448326 -141201970 + L1Md_F2 LINE L1 1981 2370 -3513 4 779 20520 72 1 1 chrX 25448337 25451073 -141199223 + L1Md_F2 LINE L1 2850 5585 -298 4 779 7839 55 5 3 chrX 25451074 25452068 -141198228 + L1Md_F2 LINE L1 5587 6582 0 4 779 4064 74 0 0 chrX 25452068 25452898 -141197398 + L1Md_Gf LINE L1 833 1759 -4127 4 779 846 129 7 26 chrX 25452898 25453049 -141197247 - L1Md_F2 LINE L1 -7 6575 6428 4 779 303 299 56 70 chrX 25453329 25453613 -141196683 - RMER17C LTR ERVK -48 362 83 4 779 5613 134 9 28 chrX 25454076 25455041 -141195255 + Lx3A LINE L1 6028 6974 -7 4 779 205 333 62 37 chrX 25456353 25456515 -141193781 + L2 LINE L2 1494 1659 -1760 4 779 521 338 40 18 chrX 25456988 25457205 -141193091 - B4A SINE B4 -2 290 75 4 779 228 86 0 0 chrX 25457241 25457276 -141193020 + (TGG)n Simple_repeat Simple_repeat 1 35 0 4 779 333 332 115 34 chrX 25457372 25457606 -141192690 + L2 LINE L2 2049 2301 -1118 4 779 4517 133 20 19 chrX 25457610 25458401 -141191895 + YREP_Mm Unknown Unknown 986 1777 -35 4 779 442 298 0 0 chrX 25459244 25459348 -141190948 + B3 SINE B2 98 201 -15 4 779 384 252 75 8 chrX 25459408 25459528 -141190768 + B1F SINE Alu 21 148 -1 4 779 949 232 19 0 chrX 25459674 25459881 -141190415 + B3 SINE B2 1 211 -5 4 779 648 316 95 37 chrX 25460114 25460387 -141189909 + B4A SINE B4 4 292 0 4 779 17022 175 37 58 chrX 25460513 25463200 -141187096 + L1VL2 LINE L1 300 2807 -3076 4 779 1002 97 0 0 chrX 25463200 25463334 -141186962 + B1_Mus2 SINE Alu 1 134 -13 4 779 17022 159 19 53 chrX 25463334 25465370 -141184926 + L1VL2 LINE L1 2808 4756 -1127 4 779 5189 143 22 1 chrX 25465371 25466219 -141184077 + Lx LINE L1 5787 6652 -2 4 779 21 89 0 0 chrX 25466283 25466339 -141183957 + AT_rich Low_complexity Low_complexity 1 56 0 4 779 321 26 0 0 chrX 25467515 25467553 -141182743 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 779 273 29 0 0 chrX 25467554 25467588 -141182708 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 779 259 271 96 70 chrX 25467908 25468023 -141182273 + B1F SINE Alu 30 147 -2 4 779 225 333 47 70 chrX 25468018 25468038 -141182258 + ID_B1 SINE B4 70 195 -29 4 779 257 283 101 28 chrX 25468038 25468147 -141182149 + B1F SINE Alu 1 117 -32 4 779 740 304 39 24 chrX 25468930 25469136 -141181160 - B3 SINE B2 -6 210 2 4 779 989 112 7 0 chrX 25469391 25469534 -141180762 - B1_Mus1 SINE Alu -1 147 4 4 779 337 269 162 10 chrX 25469535 25469733 -141180563 - B4A SINE B4 -62 230 3 4 779 180 0 0 0 chrX 25469991 25470011 -141180285 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 779 231 346 0 0 chrX 25470309 25470361 -141179935 + ID4 SINE ID 4 55 -28 4 779 21 36 0 0 chrX 25470374 25470402 -141179894 + AT_rich Low_complexity Low_complexity 1 28 0 4 779 328 322 49 8 chrX 25470650 25470772 -141179524 - B1F SINE Alu -3 146 20 4 779 25215 148 6 1 chrX 25471023 25476189 -141174107 + L1_Mus3 LINE L1 1445 6634 -4 4 779 237 108 0 0 chrX 25476617 25476654 -141173642 + (A)n Simple_repeat Simple_repeat 1 37 0 4 779 398 141 26 0 chrX 25476822 25476890 -141173406 + (TATATG)n Simple_repeat Simple_repeat 6 75 0 4 779 186 43 0 0 chrX 25476890 25476913 -141173383 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 779 398 141 26 0 chrX 25476913 25476922 -141173374 + (TATATG)n Simple_repeat Simple_repeat 3 11 0 4 779 279 288 23 35 chrX 25477480 25477579 -141172717 + B4A SINE B4 68 165 -127 4 779 227 242 14 83 chrX 25478437 25478509 -141171787 - B4A SINE B4 -139 153 87 4 779 478 291 65 13 chrX 25478518 25478671 -141171625 - B3 SINE B2 -53 163 3 4 779 387 0 0 0 chrX 25478755 25478798 -141171498 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 779 7230 109 6 2 chrX 25478922 25480712 -141169584 - L1Md_F2 LINE L1 0 6567 4771 4 779 18350 132 131 14 chrX 25480688 25485207 -141165089 - L1Md_F2 LINE L1 0 6582 1492 4 779 6585 162 28 13 chrX 25485205 25486538 -141163758 - L1_Mus3 LINE L1 -690 5948 4601 4 779 626 189 9 0 chrX 25486537 25486648 -141163648 - Lx4A LINE L1 -228 6830 6719 4 779 2163 262 68 5 chrX 25487510 25488115 -141162181 - Lx2B LINE L1 -14 6986 6344 5 779 3059 161 67 13 chrX 25488113 25488274 -141162022 + L1_Mur2 LINE L1 4537 4730 -1147 5 779 216 0 0 0 chrX 25488274 25488298 -141161998 + (TAA)n Simple_repeat Simple_repeat 1 24 0 5 779 3059 161 67 13 chrX 25488298 25488745 -141161551 + L1_Mur2 LINE L1 4731 5178 -699 5 779 392 193 22 11 chrX 25488920 25489009 -141161287 - URR1B DNA MER1_type 0 225 136 5 779 24 32 0 0 chrX 25489113 25489144 -141161152 + AT_rich Low_complexity Low_complexity 1 31 0 5 779 2948 247 21 11 chrX 25489284 25490275 -141160021 - Lx6 LINE L1 -1352 6108 5105 5 779 1193 217 40 12 chrX 25490280 25490606 -141159690 - Lx6 LINE L1 -2033 3844 3510 5 779 607 248 67 34 chrX 25490606 25490768 -141159528 - Lx6 LINE L1 -3397 2480 2324 5 779 297 0 0 0 chrX 25490768 25490801 -141159495 + (TC)n Simple_repeat Simple_repeat 2 34 0 5 779 607 248 67 34 chrX 25490801 25490847 -141159449 - Lx6 LINE L1 -3554 2323 2266 5 779 593 322 50 18 chrX 25490853 25491071 -141159225 - ORR1D2 LTR MaLR -145 225 1 5 779 381 383 35 13 chrX 25491073 25491303 -141158993 + Lx8 LINE L1 6956 7190 -283 5 779 1004 281 47 22 chrX 25491407 25491767 -141158529 + ORR1D2 LTR MaLR 1 369 -1 5 779 496 256 8 8 chrX 25491922 25492044 -141158252 + Lx8 LINE L1 6640 6761 -712 5 779 239 453 0 0 chrX 25492445 25492582 -141157714 + RMER1C Other Other 536 672 -670 5 779 340 424 16 31 chrX 25492916 25493354 -141156942 + RMER1C Other Other 401 871 -471 5 779 183 244 89 0 chrX 25493587 25493632 -141156664 - L4 LINE RTE -1524 505 457 5 779 485 22 32 42 chrX 25493784 25493879 -141156417 + (CAAAAA)n Simple_repeat Simple_repeat 3 96 0 5 779 262 344 138 19 chrX 25493998 25494158 -141156138 + RMER1C Other Other 488 666 -676 5 779 10882 110 7 22 chrX 25494665 25497172 -141153124 - L1Md_A LINE L1 -3185 2698 233 5 779 348 419 43 42 chrX 25498719 25499276 -141151020 + RMER1C Other Other 390 877 -465 5 779 280 375 61 28 chrX 25499780 25499961 -141150335 + RMER1C Other Other 521 707 -635 5 779 272 417 26 13 chrX 25500002 25500228 -141150068 + RMER1C Other Other 489 717 -625 1 779 468 0 0 0 chrX 25500697 25500749 -141149547 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 779 240 393 47 10 chrX 25501775 25501968 -141148328 + RMER1C Other Other 462 661 -681 3 779 241 395 18 18 chrX 25502784 25502949 -141147347 + RMER1C Other Other 642 806 -536 3 779 320 425 4 8 chrX 25503599 25503841 -141146455 + RMER1C Other Other 509 749 -593 4 779 248 405 26 22 chrX 25504060 25504287 -141146009 + RMER1C Other Other 464 691 -651 5 779 298 421 16 4 chrX 25504605 25504848 -141145448 + RMER1C Other Other 426 671 -671 6 779 327 387 48 25 chrX 25505048 25505560 -141144736 + RMER1C Other Other 466 865 -477 7 779 9929 184 30 8 chrX 25505824 25508806 -141141490 - Lx4A LINE L1 -279 6779 3725 8 779 3111 177 48 6 chrX 25508818 25509724 -141140572 + Lx3C LINE L1 5353 6290 -686 9 779 4775 19 0 10 chrX 25509713 25510299 -141139997 - L1_Mm LINE L1 -834 5049 4470 1 779 23895 152 25 82 chrX 25510299 25516367 -141133929 - L1Md_F LINE L1 -91 5792 261 1 779 887 162 63 14 chrX 25516401 25516608 -141133688 - L1_Mm LINE L1 -432 5451 5235 1 779 966 284 84 0 chrX 25516770 25517066 -141133230 + MER2 DNA MER2_type 1 321 -24 1 779 768 302 0 0 chrX 25517476 25517681 -141132615 + B3 SINE B2 1 205 -11 1 779 504 59 0 0 chrX 25517765 25517833 -141132463 + (TTCC)n Simple_repeat Simple_repeat 3 70 0 1 779 648 271 51 6 chrX 25517923 25518101 -141132195 - B3A SINE B2 -12 186 1 1 779 238 123 0 34 chrX 25518346 25518405 -141131891 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 779 637 248 55 33 chrX 25518416 25518691 -141131605 + Lx7 LINE L1 5857 6137 -1559 1 779 1612 286 43 21 chrX 25518726 25519304 -141130992 + Lx7 LINE L1 6064 6654 -1042 1 779 434 159 0 0 chrX 25519568 25519656 -141130640 + RMER3D-int LTR ERVK 489 564 -2278 1 779 571 218 25 40 chrX 25519671 25519872 -141130424 + RMER3D-int LTR ERVK 652 849 -1993 2 779 495 228 31 38 chrX 25519958 25520293 -141130003 + RMER3D-int LTR ERVK 359 804 -2038 2 779 506 116 80 27 chrX 25520295 25520445 -141129851 + GA-rich Low_complexity Low_complexity 3 160 0 2 779 2125 196 89 80 chrX 25520490 25520810 -141129486 + RMER3D-int LTR ERVK 1014 1383 -1459 2 779 3086 54 26 0 chrX 25520810 25521196 -141129100 - MTA_Mm LTR MaLR 0 396 1 2 779 2125 196 89 80 chrX 25521196 25521550 -141128746 + RMER3D-int LTR ERVK 1384 1694 -1148 2 779 2677 198 115 12 chrX 25521556 25522477 -141127819 + MYSERV16_I-int LTR ERVK 1311 2326 0 2 779 2882 91 10 2 chrX 25522477 25522895 -141127401 + BGLII LTR ERVK 1 421 0 2 779 1187 206 83 63 chrX 25523163 25523562 -141126734 - RLTR21 LTR ERVK -460 1112 706 2 779 12605 139 108 24 chrX 25523562 25528700 -141121596 - L1Md_F2 LINE L1 -13 6569 446 2 779 824 148 11 56 chrX 25528703 25528882 -141121414 - RLTR21 LTR ERVK -855 717 547 2 779 234 0 0 0 chrX 25528889 25528915 -141121381 + (A)n Simple_repeat Simple_repeat 1 26 0 2 779 1401 245 18 39 chrX 25528932 25529263 -141121033 - RLTR21 LTR ERVK -1248 324 1 2 779 225 240 20 40 chrX 25529662 25529762 -141120534 - Lx6 LINE L1 -31 7429 7332 2 779 1498 269 21 25 chrX 25529762 25529996 -141120300 - Lx6 LINE L1 -1326 6134 5904 2 779 2054 198 17 14 chrX 25529996 25530416 -141119880 - MTC LTR MaLR 0 421 1 3 779 1498 269 21 25 chrX 25530416 25530711 -141119585 - Lx6 LINE L1 -1557 5903 5607 2 779 1107 189 28 3 chrX 25530718 25531000 -141119296 - L1_Mur3 LINE L1 -2593 3287 2999 3 779 3650 145 21 24 chrX 25531001 25531532 -141118764 - L1_Mus3 LINE L1 -7 6631 6101 3 779 2496 59 62 3 chrX 25531532 25531855 -141118441 - ORR1A1 LTR MaLR -4 342 1 3 779 3650 145 21 24 chrX 25531855 25531979 -141118317 - L1_Mus3 LINE L1 -538 6100 5978 3 779 2084 64 57 13 chrX 25531979 25532279 -141118017 + L1Md_F2 LINE L1 5273 5585 -298 3 779 7100 82 5 14 chrX 25532280 25533282 -141117014 + L1Md_F2 LINE L1 5587 6579 -3 3 779 242 161 35 35 chrX 25534608 25534666 -141115630 + GA-rich Low_complexity Low_complexity 2 59 0 3 779 378 248 30 40 chrX 25534825 25534975 -141115321 - L1_Rod LINE L1 -306 5580 5396 3 779 2188 208 72 36 chrX 25534994 25535548 -141114748 + RLTR31A_Mm LTR ERVK 11 584 0 3 779 260 140 126 29 chrX 25535548 25535651 -141114645 - L1_Rod LINE L1 -475 5372 5260 3 779 2442 23 0 0 chrX 25535683 25535989 -141114307 - L1_Mm LINE L1 -1458 4425 4120 3 779 34087 60 0 14 chrX 25535977 25542118 -141108178 - L1Md_A LINE L1 -8 6574 519 3 779 6436 93 1 6 chrX 25542119 25543055 -141107241 - L1Md_F LINE L1 -5494 1025 95 4 779 379 153 0 6 chrX 25543120 25543211 -141107085 + MMETn-int LTR ERVK 2473 2553 -2291 4 779 4462 59 0 7 chrX 25543212 25543805 -141106491 + L1Md_F2 LINE L1 5966 6554 -28 4 779 3726 34 2 0 chrX 25543805 25544247 -141106049 + L1Md_T LINE L1 6140 6582 0 4 779 303 0 64 0 chrX 25544276 25544323 -141105973 + (CAA)n Simple_repeat Simple_repeat 2 51 0 4 779 2739 190 15 40 chrX 25544323 25545237 -141105059 + MMETn-int LTR ERVK 2542 3719 -1125 4 779 713 203 0 0 chrX 25545232 25545355 -141104941 + MMETn-int LTR ERVK 6539 6661 -745 4 779 3147 202 51 18 chrX 25545386 25546126 -141104170 - RLTR14-int LTR ERV1 -2117 3200 2436 4 779 1848 230 57 34 chrX 25547581 25548104 -141102192 + RLTR40 LTR ERVK 22 556 -261 4 779 416 146 11 0 chrX 25548106 25548195 -141102101 + GA-rich Low_complexity Low_complexity 2 91 0 4 779 510 268 43 21 chrX 25548195 25548382 -141101914 + RLTR40 LTR ERVK 566 756 -61 4 779 5765 88 49 28 chrX 25548382 25548719 -141101577 - RLTR13B1 LTR ERVK 0 893 567 4 779 5195 8 2 5 chrX 25548719 25549305 -141100991 + L1Md_T LINE L1 5999 6582 0 4 779 5765 88 49 28 chrX 25549305 25549405 -141100891 - RLTR13B1 LTR ERVK -327 566 476 4 779 507 17 0 0 chrX 25549405 25549465 -141100831 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 779 5765 88 49 28 chrX 25549465 25549900 -141100396 - RLTR13B1 LTR ERVK -418 475 3 4 779 390 21 0 0 chrX 25550153 25550200 -141100096 + (TAA)n Simple_repeat Simple_repeat 2 48 0 5 779 656 234 68 11 chrX 25551732 25551922 -141098374 - Lx9 LINE L1 -243 7401 7201 5 779 329 226 0 0 chrX 25551922 25552006 -141098290 + Lx9 LINE L1 7554 7637 -7 5 779 467 275 14 7 chrX 25552015 25552158 -141098138 + Lx5 LINE L1 6825 6968 -82 5 779 285 29 0 0 chrX 25552173 25552207 -141098089 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 5 779 620 225 35 14 chrX 25552219 25552363 -141097933 + B1_Mur2 SINE Alu 1 147 -2 5 779 1937 154 27 0 chrX 25552392 25552730 -141097566 + L1_Mus3 LINE L1 6284 6630 -8 5 779 28 48 0 0 chrX 25552743 25552785 -141097511 + AT_rich Low_complexity Low_complexity 1 42 0 5 779 222 192 0 71 chrX 25552851 25552907 -141097389 + A-rich Low_complexity Low_complexity 4 55 0 5 779 731 261 19 14 chrX 25552915 25553129 -141097167 + Lx4B LINE L1 6809 7023 -35 5 779 2719 178 32 2 chrX 25553165 25553757 -141096539 - L1_Mur2 LINE L1 -1176 4701 4092 6 779 10014 141 39 24 chrX 25553757 25555130 -141095166 - RLTR22_Mur LTR ERVK 0 1848 461 6 779 430 57 0 28 chrX 25555130 25555202 -141095094 + (TAG)n Simple_repeat Simple_repeat 3 72 0 6 779 10014 141 39 24 chrX 25555202 25555649 -141094647 - RLTR22_Mur LTR ERVK -1388 460 3 6 779 556 219 216 17 chrX 25555649 25555890 -141094406 - L1_Mm LINE L1 -1782 4101 3813 6 779 1444 132 12 4 chrX 25555934 25556178 -141094118 + L1_Mus4 LINE L1 6391 6636 0 6 779 225 0 0 0 chrX 25556667 25556692 -141093604 + (CAAAG)n Simple_repeat Simple_repeat 3 27 0 6 779 24 0 0 0 chrX 25558085 25558109 -141092187 + AT_rich Low_complexity Low_complexity 1 24 0 6 779 261 259 45 22 chrX 25558394 25558528 -141091768 + L1_Mur2 LINE L1 4334 4470 -1407 6 779 825 310 40 19 chrX 25558533 25558953 -141091343 + Lx6 LINE L1 6506 7284 -176 6 97 1467 189 20 90 chrX 25558945 25559399 -141090897 - L1_Mur2 LINE L1 -2136 3741 3320 6 780 1238 57 0 0 chrX 25559402 25559560 -141090736 - L1_Mus1 LINE L1 0 6567 6410 7 780 20474 130 5 3 chrX 25559560 25562555 -141087741 - L1_Mus1 LINE L1 -431 6136 3134 7 780 207 0 0 0 chrX 25562555 25562578 -141087718 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 780 20474 139 6 4 chrX 25562578 25563417 -141086879 - L1_Mus1 LINE L1 -2750 3133 2295 7 780 1331 179 52 0 chrX 25563418 25563669 -141086627 + L1VL1 LINE L1 3 266 -6156 7 780 4800 134 29 13 chrX 25563669 25565363 -141084933 + L1Md_F LINE L1 277 1998 -3885 7 780 33053 37 25 7 chrX 25565362 25570853 -141079443 + L1Md_T LINE L1 2 5587 -296 7 780 7691 45 40 0 chrX 25570854 25571809 -141078487 + L1Md_T LINE L1 5589 6581 -1 7 780 25188 93 5 30 chrX 25571810 25573286 -141077010 + L1Md_F2 LINE L1 1987 3462 -2421 7 780 1198 99 55 0 chrX 25573286 25573468 -141076828 + B2_Mm2 SINE B2 4 195 0 7 780 25188 87 4 27 chrX 25573468 25576120 -141074176 + L1Md_F2 LINE L1 3463 6015 -567 7 780 1758 159 29 6 chrX 25576120 25576467 -141073829 - ETnERV2-int LTR ERVK -3611 3795 3441 7 780 722 159 12 58 chrX 25576692 25576865 -141073431 - ETnERV2-int LTR ERVK -2654 2190 2026 7 780 557 82 0 0 chrX 25576873 25576946 -141073350 + L1Md_F2 LINE L1 5513 5585 -298 7 780 7763 61 1 2 chrX 25576947 25577930 -141072366 + L1Md_F2 LINE L1 5587 6568 -14 7 780 2491 203 44 55 chrX 25577931 25578896 -141071400 - ETnERV2-int LTR ERVK -4297 3109 1934 7 780 1306 272 34 7 chrX 25579143 25579558 -141070738 + MuRRS4-int LTR ERV1 1019 1444 -3619 8 780 273 237 53 101 chrX 25579580 25579619 -141070677 + MuRRS4-int LTR ERV1 1610 1648 -3042 8 780 588 40 0 0 chrX 25579619 25579694 -141070602 + (GA)n Simple_repeat Simple_repeat 1 75 0 8 780 4948 128 39 17 chrX 25579694 25581018 -141069278 + MuRRS4-int LTR ERV1 2008 4325 -3231 8 780 4146 206 18 12 chrX 25581016 25581916 -141068380 + MuRRS4-int LTR ERV1 3367 4271 -792 8 780 653 223 0 6 chrX 25581907 25582065 -141068231 + MuRRS4-int LTR ERV1 4788 4944 -119 8 780 993 267 13 10 chrX 25582056 25582355 -141067941 + MuRRS4-int LTR ERV1 4636 4935 -128 8 780 2303 348 28 35 chrX 25582937 25584543 -141065753 + RodERV21-int LTR ERV1 2905 4498 -493 8 780 2354 145 17 38 chrX 25584548 25584965 -141065331 + RLTR9B2 LTR ERVK 3 410 -10 8 780 740 143 8 8 chrX 25584967 25585087 -141065209 + RLTR9B2 LTR ERVK 301 420 0 8 780 699 283 31 11 chrX 25585093 25585379 -141064917 + RodERV21-int LTR ERV1 4502 4793 -198 8 780 862 134 0 72 chrX 25585826 25585979 -141064317 + B1_Mus1 SINE Alu 7 148 0 8 780 848 237 32 56 chrX 25586053 25586715 -141063581 + L1Md_F2 LINE L1 217 1040 -5684 8 780 15141 57 1 0 chrX 25586714 25588722 -141061574 + L1Md_F2 LINE L1 3577 5586 -297 8 780 7418 66 21 0 chrX 25588722 25589686 -141060610 + L1Md_F2 LINE L1 5587 6570 -12 8 780 1172 204 86 48 chrX 25589686 25590114 -141060182 + RLTR21 LTR ERVK 707 1254 -150 8 780 2401 101 6 3 chrX 25590351 25590710 -141059586 - BGLII LTR ERVK 0 421 62 8 780 2435 217 109 6 chrX 25590717 25591539 -141058757 - MYSERV16_I-int LTR ERVK -112 2214 1308 9 780 2105 200 87 78 chrX 25591562 25591897 -141058399 - RMER3D-int LTR ERVK -1164 1678 1384 9 780 3227 53 2 0 chrX 25591897 25592292 -141058004 + MTA_Mm LTR MaLR 1 396 0 9 780 2105 200 87 78 chrX 25592292 25592613 -141057683 - RMER3D-int LTR ERVK -1459 1383 1016 9 780 416 202 0 68 chrX 25592661 25592852 -141057444 + CT-rich Low_complexity Low_complexity 2 179 0 9 780 400 189 0 0 chrX 25592875 25592949 -141057347 - RMER3D-int LTR ERVK -2280 562 489 9 780 543 186 16 35 chrX 25593021 25593168 -141057128 - RMER3D-int LTR ERVK -2069 773 650 9 780 533 228 25 40 chrX 25593258 25593459 -141056837 - RMER3D-int LTR ERVK -1993 849 652 9 780 418 146 0 0 chrX 25593477 25593562 -141056734 - RMER3D-int LTR ERVK -2279 563 489 9 780 691 246 106 0 chrX 25593848 25594047 -141056249 - MER2 DNA MER2_type -118 227 8 9 780 843 161 62 19 chrX 25594214 25594423 -141055873 + L1_Mm LINE L1 5234 5451 -432 9 780 548 285 25 102 chrX 25594469 25594947 -141055349 + L1_Mus1 LINE L1 273 693 -5941 9 780 438 230 26 39 chrX 25594978 25595132 -141055164 + L1Md_F LINE L1 578 729 -5790 9 780 2118 198 13 0 chrX 25595113 25595588 -141054708 + L1Md_F LINE L1 628 1108 -5411 9 780 24527 126 13 56 chrX 25595585 25601379 -141048917 + L1_Mus1 LINE L1 1071 6567 0 9 780 4320 167 17 5 chrX 25601393 25602206 -141048090 + Lx2 LINE L1 5823 6645 -352 1 780 1127 179 18 0 chrX 25602201 25602419 -141047877 + Lx2 LINE L1 6770 6991 -6 1 780 403 226 39 19 chrX 25602710 25602814 -141047482 - ID_B1 SINE B4 -2 222 117 1 780 5669 190 38 9 chrX 25602814 25604338 -141045958 - Lx3C LINE L1 -57 6919 5354 1 780 10157 179 30 10 chrX 25604351 25607338 -141042958 + Lx4A LINE L1 3725 6779 -279 1 780 308 386 32 28 chrX 25607704 25608208 -141042088 - RMER1C Other Other -477 865 374 1 780 346 407 24 12 chrX 25608315 25608566 -141041730 - RMER1C Other Other -599 743 490 1 780 340 404 25 18 chrX 25608827 25609102 -141041194 - RMER1C Other Other -602 740 464 1 780 269 425 12 26 chrX 25609218 25609561 -141040735 - RMER1C Other Other -496 846 509 1 780 250 411 17 11 chrX 25610188 25610365 -141039931 - RMER1C Other Other -691 651 474 1 780 275 397 44 6 chrX 25611174 25611354 -141038942 - RMER1C Other Other -766 576 419 1 780 35397 21 0 0 chrX 25611434 25616298 -141033998 - L1Md_A LINE L1 -2 6580 1717 1 780 345 441 31 19 chrX 25616367 25616902 -141033394 - RMER1C Other Other -509 833 379 1 780 234 0 0 0 chrX 25617258 25617284 -141033012 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 780 513 0 0 0 chrX 25617284 25617340 -141032956 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 780 620 407 34 28 chrX 25617462 25618255 -141032041 - RMER1C Other Other -475 867 393 1 780 397 415 30 30 chrX 25618737 25619411 -141030885 - RMER1C Other Other -457 885 487 1 780 3616 166 8 3 chrX 25620850 25621498 -141028798 + L1Md_F2 LINE L1 441 1091 -5633 1 780 2734 94 0 2 chrX 25621496 25621891 -141028405 + L1Md_F2 LINE L1 1977 2370 -3513 1 780 22817 74 0 2 chrX 25621902 25625371 -141024925 + L1Md_F2 LINE L1 2850 6312 -270 1 780 1674 60 0 0 chrX 25625348 25625582 -141024714 + L1Md_F2 LINE L1 1526 1759 -4124 1 780 812 127 35 21 chrX 25625586 25625731 -141024565 - L1_Mus1 LINE L1 0 6567 6421 1 780 287 317 53 67 chrX 25626010 25626294 -141024002 - RMER17C LTR ERVK -48 362 83 1 780 5841 127 7 28 chrX 25626758 25627725 -141022571 + Lx3A LINE L1 6028 6974 -7 1 780 220 327 62 37 chrX 25629037 25629199 -141021097 + L2 LINE L2 1494 1659 -1760 1 780 181 347 52 10 chrX 25629562 25629658 -141020638 + L2 LINE L2 1926 2025 -1394 1 780 562 326 40 18 chrX 25629672 25629889 -141020407 - B4A SINE B4 -2 290 75 1 780 255 79 0 0 chrX 25629922 25629960 -141020336 + (TGG)n Simple_repeat Simple_repeat 1 38 0 1 780 319 302 159 73 chrX 25630056 25630288 -141020008 + L2 LINE L2 2049 2300 -1119 1 780 4512 137 12 19 chrX 25630293 25631090 -141019206 + YREP_Mm Unknown Unknown 986 1777 -35 1 780 35325 36 0 0 chrX 25631469 25636915 -141013381 + L1Md_T LINE L1 48 5589 -297 1 780 8963 6 0 0 chrX 25636915 25637911 -141012385 + L1Md_T LINE L1 5590 6585 0 1 780 421 272 10 10 chrX 25638403 25638507 -141011789 + B3 SINE B2 98 201 -15 1 780 384 252 75 8 chrX 25638567 25638687 -141011609 + B1F SINE Alu 21 148 -1 1 780 964 227 19 0 chrX 25638833 25639040 -141011256 + B3 SINE B2 1 211 -5 1 780 652 322 92 33 chrX 25639275 25639548 -141010748 + B4A SINE B4 4 292 0 1 780 14340 176 77 62 chrX 25639674 25642379 -141007917 + L1VL2 LINE L1 300 2807 -3076 1 780 970 104 0 0 chrX 25642379 25642513 -141007783 + B1_Mus2 SINE Alu 1 134 -13 1 780 14340 162 85 58 chrX 25642513 25644312 -141005984 + L1VL2 LINE L1 2808 4756 -1127 1 780 5115 147 19 1 chrX 25644313 25645164 -141005132 + Lx LINE L1 5787 6652 -2 1 780 21 89 0 0 chrX 25645228 25645284 -141005012 + AT_rich Low_complexity Low_complexity 1 56 0 1 780 22 70 0 0 chrX 25645491 25645534 -141004762 + AT_rich Low_complexity Low_complexity 1 43 0 1 780 771 32 0 0 chrX 25646463 25646557 -141003739 + (TC)n Simple_repeat Simple_repeat 2 95 0 1 780 255 31 0 0 chrX 25646558 25646590 -141003706 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 780 269 269 95 69 chrX 25646910 25647026 -141003270 + B1F SINE Alu 29 147 -2 1 780 2985 3 0 0 chrX 25647044 25647373 -141002923 - L1Md_A LINE L1 -259 5624 5296 1 780 8398 1 0 6 chrX 25647373 25648310 -141001986 + L1Md_A LINE L1 5652 6582 0 1 780 241 278 50 43 chrX 25648317 25648426 -141001870 + PB1D10 SINE Alu 1 117 -32 1 780 751 285 44 29 chrX 25649201 25649407 -141000889 - B3 SINE B2 -6 210 2 1 780 991 112 7 0 chrX 25649662 25649805 -141000491 - B1_Mus1 SINE Alu -1 147 4 1 780 348 267 160 10 chrX 25649806 25650006 -141000290 - B4A SINE B4 -62 230 1 1 780 225 0 0 0 chrX 25650261 25650286 -141000010 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1 780 231 346 0 0 chrX 25650584 25650636 -140999660 + ID4 SINE ID 4 55 -28 1 780 21 36 0 0 chrX 25650649 25650677 -140999619 + AT_rich Low_complexity Low_complexity 1 28 0 1 780 295 339 49 8 chrX 25650925 25651047 -140999249 - B1F SINE Alu -3 146 20 1 780 25155 148 6 2 chrX 25651297 25656466 -140993830 + L1_Mus3 LINE L1 1445 6634 -4 1 780 208 147 0 0 chrX 25656897 25656931 -140993365 + (A)n Simple_repeat Simple_repeat 1 34 0 1 780 251 158 35 0 chrX 25657107 25657146 -140993150 + (TATATG)n Simple_repeat Simple_repeat 4 44 0 1 780 369 0 0 0 chrX 25657146 25657187 -140993109 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 780 251 158 35 0 chrX 25657187 25657204 -140993092 + (TATATG)n Simple_repeat Simple_repeat 5 21 0 1 780 264 350 20 10 chrX 25657779 25657880 -140992416 + PB1D10 SINE Alu 1 102 -15 1 780 235 352 22 11 chrX 25658784 25658873 -140991423 - B3 SINE B2 -14 202 113 1 780 213 284 0 69 chrX 25658877 25658949 -140991347 - B4A SINE B4 -139 153 87 1 780 470 298 65 13 chrX 25658958 25659111 -140991185 - B3 SINE B2 -53 163 3 1 780 351 0 0 0 chrX 25659195 25659234 -140991062 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 780 6819 109 24 10 chrX 25659354 25661133 -140989163 - L1_Mus1 LINE L1 0 6567 4778 1 780 7301 78 5 10 chrX 25661126 25662292 -140988004 - L1Md_F2 LINE L1 -15 6567 5405 1 780 17530 159 11 16 chrX 25662290 25665624 -140984672 - L1_Mus1 LINE L1 -1075 4808 1492 1 780 6641 159 27 13 chrX 25665622 25666957 -140983339 - L1_Mus3 LINE L1 -690 5948 4601 1 780 607 207 9 0 chrX 25666956 25667067 -140983229 - Lx4A LINE L1 -228 6830 6719 1 780 1897 265 67 11 chrX 25667926 25668537 -140981759 - Lx2B LINE L1 -14 6986 6342 1 780 2880 159 65 15 chrX 25668534 25668694 -140981602 + Lx6 LINE L1 4537 4730 -1147 1 780 270 0 0 0 chrX 25668694 25668724 -140981572 + (TAA)n Simple_repeat Simple_repeat 1 30 0 1 780 2880 159 65 15 chrX 25668724 25669174 -140981122 + Lx6 LINE L1 4731 5178 -699 1 780 443 176 0 36 chrX 25669347 25669459 -140980837 - URR1B DNA MER1_type 0 225 118 1 780 359 284 71 47 chrX 25669787 25669957 -140980339 + RLTR1B LTR ERV1 166 339 -173 1 780 8106 31 0 0 chrX 25670128 25671437 -140978859 - L1Md_A LINE L1 -1 6581 5272 1 780 642 171 0 8 chrX 25671436 25671560 -140978736 + L1_Mus3 LINE L1 5978 6100 -538 1 780 2560 76 0 3 chrX 25671560 25671902 -140978394 + ORR1A1 LTR MaLR 1 341 -5 1 780 3079 146 25 8 chrX 25671907 25672433 -140977863 + L1_Mus3 LINE L1 6096 6630 -8 1 780 1035 196 28 7 chrX 25672434 25672717 -140977579 + L1_Mur3 LINE L1 2999 3287 -2593 1 780 1446 275 21 26 chrX 25672724 25673020 -140977276 + Lx6 LINE L1 5607 5903 -1557 1 780 1978 200 17 17 chrX 25673020 25673441 -140976855 + MTC LTR MaLR 1 421 0 1 780 1446 275 21 26 chrX 25673441 25673675 -140976621 + Lx6 LINE L1 5904 6134 -1326 1 780 2691 62 23 6 chrX 25673945 25674299 -140975997 + L1Md_F2 LINE L1 6214 6573 -9 1 780 1229 208 76 45 chrX 25674299 25674723 -140975573 + RLTR21 LTR ERVK 711 1251 -153 1 780 2896 93 7 2 chrX 25674964 25675382 -140974914 - BGLII LTR ERVK 0 421 2 1 780 2668 206 112 9 chrX 25675383 25676307 -140973989 - MYSERV16_I-int LTR ERVK 0 2326 1308 1 780 2064 199 91 82 chrX 25676329 25676664 -140973632 - RMER3D-int LTR ERVK -1164 1678 1386 1 780 3211 53 2 0 chrX 25676664 25677059 -140973237 + MTA_Mm LTR MaLR 1 396 0 1 780 2064 199 91 82 chrX 25677059 25677380 -140972916 - RMER3D-int LTR ERVK -1457 1385 1016 1 780 495 122 82 35 chrX 25677426 25677596 -140972700 + CT-rich Low_complexity Low_complexity 3 180 0 1 780 496 234 74 35 chrX 25677635 25677942 -140972354 - RMER3D-int LTR ERVK -2038 804 354 1 780 610 207 25 40 chrX 25678008 25678209 -140972087 - RMER3D-int LTR ERVK -1993 849 652 1 780 424 158 0 0 chrX 25678236 25678312 -140971984 - RMER3D-int LTR ERVK -2278 564 489 1 780 1159 250 67 21 chrX 25678361 25678737 -140971559 - Lx7 LINE L1 -1243 6453 6061 1 780 589 259 65 44 chrX 25678773 25679048 -140971248 - Lx7 LINE L1 -1559 6137 5857 1 780 658 277 51 6 chrX 25679344 25679522 -140970774 + B3A SINE B2 1 186 -12 1 780 195 42 0 0 chrX 25679613 25679637 -140970659 + (GGAA)n Simple_repeat Simple_repeat 3 26 0 1 780 833 289 0 0 chrX 25679722 25679926 -140970370 - B3 SINE B2 -12 204 1 1 780 985 271 86 0 chrX 25680351 25680642 -140969654 - MER2 DNA MER2_type -29 316 1 1 780 718 188 73 15 chrX 25680806 25681011 -140969285 + L1_Mm LINE L1 5235 5451 -432 1 780 552 277 29 112 chrX 25681057 25681522 -140968774 + L1VL1 LINE L1 45 392 -6030 1 780 528 218 45 8 chrX 25681559 25681693 -140968603 + L1_Mus1 LINE L1 664 802 -5814 1 780 19062 172 11 69 chrX 25681702 25687934 -140962362 + L1_Mus1 LINE L1 725 6567 0 1 780 4144 179 20 4 chrX 25687942 25688760 -140961536 + Lx2 LINE L1 5813 6643 -354 1 780 1248 167 5 0 chrX 25688760 25688976 -140961320 + Lx2 LINE L1 6775 6991 -6 1 780 362 213 0 13 chrX 25689268 25689344 -140960952 - ID_B1 SINE B4 -2 222 148 1 780 615 27 0 0 chrX 25689347 25689420 -140960876 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 780 292 262 56 46 chrX 25689420 25689448 -140960848 - B1F SINE Alu -85 64 39 1 97 6010 186 29 6 chrX 25689448 25690992 -140959304 - Lx3C LINE L1 -40 6936 5353 1 781 6498 182 31 20 chrX 25691004 25691093 -140959203 + Lx4A LINE L1 3725 3813 -2064 1 781 3373 35 2 0 chrX 25691093 25691488 -140958808 + MTA_Mm LTR MaLR 1 396 0 1 781 9228 32 2 1 chrX 25691488 25692585 -140957711 + MTA_Mm-int LTR MaLR 1 1098 0 1 781 3418 25 2 2 chrX 25692585 25692981 -140957315 + MTA_Mm LTR MaLR 1 396 0 1 781 6498 182 31 20 chrX 25692981 25694345 -140955951 + Lx4A LINE L1 3814 5194 -683 1 781 3310 33 171 1 chrX 25694340 25694920 -140955376 - L1Md_T LINE L1 -595 5987 5309 1 781 7774 38 0 1 chrX 25694943 25695872 -140954424 + L1Md_T LINE L1 5655 6582 0 1 781 5251 190 23 11 chrX 25695884 25697447 -140952849 + Lx4A LINE L1 5190 6779 -279 1 781 264 341 21 21 chrX 25697815 25697956 -140952340 - RMER1C Other Other -536 806 666 1 781 225 401 7 21 chrX 25698121 25698266 -140952030 - RMER1C Other Other -585 757 615 1 781 430 419 12 0 chrX 25698427 25698680 -140951616 - RMER1C Other Other -523 819 564 1 781 22 0 0 0 chrX 25698829 25698851 -140951445 + AT_rich Low_complexity Low_complexity 1 22 0 1 781 325 405 25 18 chrX 25698945 25699219 -140951077 - RMER1C Other Other -603 739 464 1 781 253 431 8 12 chrX 25699438 25699680 -140950616 - RMER1C Other Other -593 749 509 1 781 477 0 0 0 chrX 25700111 25700164 -140950132 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 781 243 418 22 23 chrX 25700382 25700748 -140949548 - RMER1C Other Other -469 873 494 2 781 230 398 47 10 chrX 25701356 25701549 -140948747 - RMER1C Other Other -681 661 462 2 781 242 399 21 2 chrX 25701678 25701881 -140948415 - RMER1C Other Other -584 758 486 2 781 509 375 43 20 chrX 25703160 25703506 -140946790 - RMER1C Other Other -468 874 521 2 781 275 425 23 17 chrX 25704010 25704357 -140945939 - RMER1C Other Other -507 835 487 2 781 3110 165 6 78 chrX 25706100 25706372 -140943924 + L1Md_A LINE L1 441 695 -6029 2 781 562 0 0 0 chrX 25706372 25706442 -140943854 - L1Md_T LINE L1 0 6582 6513 2 781 3110 165 6 78 chrX 25706442 25706871 -140943425 + L1Md_A LINE L1 696 1091 -5633 2 781 20058 73 150 2 chrX 25706869 25710011 -140940285 + L1Md_A LINE L1 1977 5586 -297 2 781 7900 57 1 0 chrX 25710011 25710994 -140939302 + L1Md_F2 LINE L1 5587 6570 -12 2 781 3761 88 0 51 chrX 25710996 25711883 -140938413 + L1Md_Gf LINE L1 828 1762 -4124 2 781 871 106 7 14 chrX 25711887 25712031 -140938265 - L1Md_F2 LINE L1 -12 6570 6428 2 781 276 326 57 64 chrX 25712312 25712594 -140937702 - RMER17C LTR ERVK -48 362 83 2 781 5799 125 16 36 chrX 25713034 25714024 -140936272 + Lx3A LINE L1 6006 6975 -6 2 781 227 303 71 64 chrX 25715368 25715509 -140934787 + L2 LINE L2 1518 1659 -1760 2 781 197 337 52 10 chrX 25715872 25715968 -140934328 + L2 LINE L2 1926 2025 -1394 2 781 423 325 44 0 chrX 25715983 25716097 -140934199 - B4A SINE B4 -2 290 172 2 781 406 330 106 34 chrX 25716338 25716573 -140933723 + L2 LINE L2 2049 2300 -1119 2 781 4567 136 12 19 chrX 25716578 25717375 -140932921 + YREP_Mm Unknown Unknown 986 1777 -35 2 781 423 298 0 0 chrX 25718218 25718322 -140931974 + B3 SINE B2 98 201 -15 2 781 351 269 75 8 chrX 25718382 25718502 -140931794 + B1F SINE Alu 21 148 -1 2 781 967 232 19 0 chrX 25718648 25718855 -140931441 + B3 SINE B2 1 211 -5 2 781 648 331 86 22 chrX 25719087 25719356 -140930940 + B4A SINE B4 4 289 -3 2 781 13135 146 34 53 chrX 25719486 25722174 -140928122 + L1VL2 LINE L1 1 2506 -1109 2 781 997 104 0 0 chrX 25722174 25722308 -140927988 + B1_Mus2 SINE Alu 1 134 -13 2 781 495 60 0 0 chrX 25722318 25722385 -140927911 + (TAA)n Simple_repeat Simple_repeat 2 68 0 2 781 13027 169 15 44 chrX 25722385 25724343 -140925953 + L1_Mm LINE L1 2809 4755 -1128 2 781 5218 145 18 1 chrX 25724344 25725196 -140925100 + Lx LINE L1 5787 6652 -2 2 781 21 82 0 0 chrX 25725285 25725334 -140924962 + AT_rich Low_complexity Low_complexity 1 49 0 2 781 25 65 0 0 chrX 25726195 25726241 -140924055 + AT_rich Low_complexity Low_complexity 1 46 0 2 781 450 0 0 0 chrX 25726469 25726519 -140923777 + (TC)n Simple_repeat Simple_repeat 2 51 0 2 781 324 0 0 0 chrX 25726520 25726556 -140923740 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 781 24 0 0 0 chrX 25726834 25726858 -140923438 + AT_rich Low_complexity Low_complexity 1 24 0 2 781 254 286 134 60 chrX 25726858 25726992 -140923304 + B1F SINE Alu 4 147 -2 2 781 216 342 47 70 chrX 25726987 25727007 -140923289 + ID_B1 SINE B4 70 195 -29 2 781 260 283 101 28 chrX 25727007 25727116 -140923180 + B1F SINE Alu 1 117 -32 2 781 799 289 39 24 chrX 25727896 25728102 -140922194 - B3 SINE B2 -6 210 2 2 781 957 126 7 0 chrX 25728358 25728501 -140921795 - B1_Mus1 SINE Alu -1 147 4 2 781 557 259 165 15 chrX 25728502 25728702 -140921594 - B4A SINE B4 -62 230 1 2 781 183 42 0 0 chrX 25728961 25728985 -140921311 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 2 781 214 365 0 0 chrX 25729281 25729333 -140920963 + ID4 SINE ID 4 55 -28 2 781 21 36 0 0 chrX 25729346 25729374 -140920922 + AT_rich Low_complexity Low_complexity 1 28 0 2 781 304 331 49 8 chrX 25729622 25729744 -140920552 - B1F SINE Alu -3 146 20 2 781 25126 147 8 2 chrX 25729995 25735153 -140915143 + L1_Mus3 LINE L1 1445 6634 -4 2 781 207 114 0 0 chrX 25735584 25735619 -140914677 + (A)n Simple_repeat Simple_repeat 1 35 0 2 781 419 153 24 0 chrX 25735785 25735859 -140914437 + (TATATG)n Simple_repeat Simple_repeat 6 81 0 2 781 240 35 0 0 chrX 25735859 25735888 -140914408 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 781 419 153 24 0 chrX 25735888 25735898 -140914398 + (TATATG)n Simple_repeat Simple_repeat 2 11 0 2 781 264 279 29 0 chrX 25736470 25736538 -140913758 + PB1D10 SINE Alu 1 70 -47 2 781 256 326 34 0 chrX 25736538 25736567 -140913729 + ID_B1 SINE B4 83 190 -102 2 781 233 364 22 11 chrX 25737478 25737567 -140912729 - B3 SINE B2 -14 202 113 2 781 236 269 0 69 chrX 25737571 25737643 -140912653 - B4A SINE B4 -139 153 87 2 781 489 301 65 13 chrX 25737650 25737805 -140912491 - B3 SINE B2 -51 165 3 2 781 321 47 0 0 chrX 25737889 25737932 -140912364 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 781 7068 105 24 2 chrX 25738048 25739819 -140910477 - L1Md_F2 LINE L1 0 6567 4771 2 781 18291 131 132 14 chrX 25739795 25744303 -140905993 - L1Md_F2 LINE L1 0 6582 1501 2 781 6760 156 28 3 chrX 25744310 25745489 -140904807 - L1_Mus3 LINE L1 -690 5948 4735 2 781 246 32 0 0 chrX 25745489 25745520 -140904776 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 781 6760 171 30 4 chrX 25745520 25745655 -140904641 - L1_Mus3 LINE L1 -1149 4734 4601 2 781 610 198 9 0 chrX 25745654 25745765 -140904531 - Lx4A LINE L1 -228 6830 6719 2 781 2246 257 68 3 chrX 25746627 25747233 -140903063 - Lx2B LINE L1 -14 6986 6342 2 781 3164 170 38 14 chrX 25747230 25747857 -140902439 + L1_Mur2 LINE L1 4537 5178 -699 2 781 448 159 22 11 chrX 25748030 25748119 -140902177 - URR1B DNA MER1_type 0 225 136 2 781 24 32 0 0 chrX 25748223 25748254 -140902042 + AT_rich Low_complexity Low_complexity 1 31 0 2 781 3013 243 21 11 chrX 25748394 25749385 -140900911 - Lx6 LINE L1 -1352 6108 5105 2 781 1092 223 36 18 chrX 25749390 25749719 -140900577 - Lx6 LINE L1 -2035 3845 3511 2 781 670 238 67 34 chrX 25749719 25749881 -140900415 - Lx6 LINE L1 -3397 2480 2324 2 781 549 0 0 0 chrX 25749881 25749942 -140900354 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 781 670 238 67 34 chrX 25749942 25749988 -140900308 - Lx6 LINE L1 -3554 2323 2266 2 781 610 316 60 28 chrX 25749994 25750212 -140900084 - ORR1D2 LTR MaLR -145 225 1 2 781 337 370 0 0 chrX 25750219 25750354 -140899942 + Lx7 LINE L1 6949 7083 -613 2 781 1028 278 47 22 chrX 25750551 25750911 -140899385 + ORR1D2 LTR MaLR 1 369 -1 2 781 519 276 8 0 chrX 25751063 25751190 -140899106 + Lx8 LINE L1 6636 6763 -710 2 781 225 256 12 25 chrX 25751454 25751534 -140898762 - Lx9 LINE L1 -1398 6246 6168 2 781 262 445 0 0 chrX 25751588 25751725 -140898571 + RMER1C Other Other 536 672 -670 2 781 340 424 16 31 chrX 25752059 25752497 -140897799 + RMER1C Other Other 401 871 -471 2 781 432 53 0 38 chrX 25752932 25753011 -140897285 + (CAAAAA)n Simple_repeat Simple_repeat 3 78 0 2 781 274 324 91 28 chrX 25753130 25753273 -140897023 + RMER1C Other Other 488 639 -703 2 781 10840 69 4 1 chrX 25753799 25754522 -140895774 - L1Md_A LINE L1 -3185 2698 1976 2 781 201 39 0 0 chrX 25754522 25754548 -140895748 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 781 10840 127 10 22 chrX 25754548 25756314 -140893982 - L1Md_A LINE L1 -3908 1975 233 2 781 375 424 23 19 chrX 25757766 25758416 -140891880 + RMER1C Other Other 390 877 -465 2 781 627 398 42 25 chrX 25758921 25759369 -140890927 + RMER1C Other Other 412 867 -475 2 781 281 395 39 31 chrX 25759411 25759819 -140890477 + RMER1C Other Other 414 737 -605 2 781 531 0 0 0 chrX 25759837 25759896 -140890400 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 781 336 450 20 18 chrX 25760258 25760707 -140889589 + RMER1C Other Other 412 833 -509 2 781 308 405 31 31 chrX 25760907 25761103 -140889193 + RMER1C Other Other 566 761 -581 2 781 328 409 42 54 chrX 25761736 25762277 -140888019 + RMER1C Other Other 378 837 -505 2 781 330 432 11 31 chrX 25762747 25763110 -140887186 + RMER1C Other Other 436 783 -559 2 781 336 401 26 22 chrX 25763208 25763435 -140886861 + RMER1C Other Other 464 691 -651 2 781 352 441 13 10 chrX 25763687 25763996 -140886300 + RMER1C Other Other 510 819 -523 2 781 340 391 32 39 chrX 25764091 25764608 -140885688 + RMER1C Other Other 362 865 -477 2 781 10694 180 32 8 chrX 25764974 25767955 -140882341 - Lx4A LINE L1 -279 6779 3720 2 781 6481 182 37 6 chrX 25767962 25769499 -140880797 + Lx3C LINE L1 5353 6936 -40 2 781 224 314 36 62 chrX 25769499 25769529 -140880767 + B1_Mur1 SINE Alu 39 66 -83 2 781 186 43 0 0 chrX 25769529 25769552 -140880744 + (CATA)n Simple_repeat Simple_repeat 2 24 0 2 781 361 213 0 13 chrX 25769557 25769633 -140880663 + ID_B1 SINE B4 148 222 -2 2 781 1255 182 9 0 chrX 25769924 25770149 -140880147 - Lx2 LINE L1 -6 6991 6765 2 781 4478 171 21 4 chrX 25770138 25770948 -140879348 - Lx2 LINE L1 -352 6645 5822 2 781 4464 103 5 5 chrX 25770960 25771604 -140878692 - L1_Mus1 LINE L1 0 6567 5924 2 781 36682 31 3 7 chrX 25771604 25777003 -140873293 + L1Md_T LINE L1 215 5587 -296 2 781 8789 43 1 0 chrX 25777004 25777997 -140872299 + L1Md_T LINE L1 5589 6582 0 2 781 22296 193 18 62 chrX 25778010 25784145 -140866151 - L1_Mus1 LINE L1 -630 5937 261 2 781 977 165 62 10 chrX 25784177 25784385 -140865911 - L1_Mm LINE L1 -430 5453 5235 2 781 980 277 84 0 chrX 25784547 25784843 -140865453 + MER2 DNA MER2_type 1 321 -24 2 781 871 293 10 0 chrX 25785263 25785468 -140864828 + B3 SINE B2 1 207 -9 2 781 447 19 0 0 chrX 25785550 25785602 -140864694 + (TTCC)n Simple_repeat Simple_repeat 3 54 0 2 781 709 277 51 6 chrX 25785693 25785871 -140864425 - B3A SINE B2 -12 186 1 2 781 472 84 0 24 chrX 25786116 25786201 -140864095 + (TA)n Simple_repeat Simple_repeat 2 84 0 2 781 645 263 55 26 chrX 25786212 25786485 -140863811 + Lx7 LINE L1 5857 6137 -1559 2 781 1858 280 47 19 chrX 25786521 25787099 -140863197 + Lx7 LINE L1 6061 6654 -1042 2 781 664 228 55 53 chrX 25787363 25787712 -140862584 + RMER3D-int LTR ERVK 489 849 -1993 2 781 587 217 67 35 chrX 25787733 25788088 -140862208 + RMER3D-int LTR ERVK 354 806 -2036 2 781 502 110 80 27 chrX 25788090 25788240 -140862056 + GA-rich Low_complexity Low_complexity 3 160 0 2 781 1678 179 163 35 chrX 25788262 25788608 -140861688 + RMER3D-int LTR ERVK 1014 1383 -1459 2 781 3465 51 2 0 chrX 25788608 25789003 -140861293 - MTA_Mm LTR MaLR 0 396 1 3 781 1678 189 21 46 chrX 25789003 25789160 -140861136 + RMER3D-int LTR ERVK 1384 1533 -1309 2 781 549 245 35 47 chrX 25789188 25789359 -140860937 + RMER3D-int LTR ERVK 1528 1696 -1146 2 781 3074 220 43 52 chrX 25789340 25790283 -140860013 + RMER3D-int LTR ERVK 1907 2841 -1 2 781 3079 92 17 2 chrX 25790284 25790699 -140859597 + BGLII LTR ERVK 1 421 0 2 781 1167 215 62 47 chrX 25790969 25791370 -140858926 - RLTR21 LTR ERVK -460 1112 706 3 781 11850 93 4 2 chrX 25791370 25793709 -140856587 - L1Md_F2 LINE L1 -13 6569 4226 3 781 13673 116 5 25 chrX 25793693 25796491 -140853805 - L1Md_F2 LINE L1 -2718 3165 446 3 781 791 154 11 56 chrX 25796494 25796673 -140853623 - RLTR21 LTR ERVK -855 717 547 3 781 180 0 0 0 chrX 25796680 25796700 -140853596 + (A)n Simple_repeat Simple_repeat 1 20 0 3 781 1453 229 18 39 chrX 25796717 25797048 -140853248 - RLTR21 LTR ERVK -1248 324 1 3 781 237 316 0 17 chrX 25797431 25797547 -140852749 - Lx6 LINE L1 -15 7445 7332 3 781 1765 257 20 28 chrX 25797547 25797781 -140852515 - Lx6 LINE L1 -1326 6134 5904 3 781 2264 193 17 14 chrX 25797781 25798201 -140852095 - MTC LTR MaLR 0 421 1 3 781 1765 257 20 28 chrX 25798201 25798475 -140851821 - Lx6 LINE L1 -1557 5903 5630 3 781 1177 196 28 7 chrX 25798504 25798787 -140851509 - L1_Mur3 LINE L1 -2593 3287 2999 3 781 3687 156 37 25 chrX 25798788 25799319 -140850977 - L1_Mus3 LINE L1 -8 6630 6101 3 781 2796 82 0 3 chrX 25799319 25799662 -140850634 - ORR1A1 LTR MaLR -4 342 1 3 781 3687 156 37 25 chrX 25799662 25799775 -140850521 - L1_Mus3 LINE L1 -538 6100 5978 3 781 2291 66 36 0 chrX 25799775 25800078 -140850218 + L1Md_F2 LINE L1 5273 5586 -297 3 781 7825 73 5 12 chrX 25800079 25801079 -140849217 + L1Md_F2 LINE L1 5588 6580 -2 3 781 1312 314 35 39 chrX 25801091 25801632 -140848664 - RodERV21-int LTR ERV1 -3339 1652 1114 3 781 339 269 58 65 chrX 25801771 25801910 -140848386 - RodERV21-int LTR ERV1 -3961 1030 893 3 781 226 297 13 13 chrX 25802949 25803024 -140847272 + GA-rich Low_complexity Low_complexity 3 77 0 3 781 434 245 27 40 chrX 25803175 25803324 -140846972 - L1_Rod LINE L1 -313 5534 5388 3 781 2293 198 69 32 chrX 25803335 25803889 -140846407 + RLTR31A_Mm LTR ERVK 11 584 0 3 781 243 219 104 9 chrX 25803889 25803995 -140846301 - L1_Rod LINE L1 -475 5372 5257 3 781 841 145 13 46 chrX 25804144 25804296 -140846000 - B1_Mus1 SINE Alu 0 148 2 3 781 3608 321 45 50 chrX 25804740 25805031 -140845265 - RodERV21-int LTR ERV1 -198 4793 4501 3 781 2621 126 35 54 chrX 25805031 25805459 -140844837 - RLTR9B2 LTR ERVK 0 420 1 3 781 3608 321 45 50 chrX 25805459 25807270 -140843026 - RodERV21-int LTR ERV1 -491 4500 2702 3 781 1121 269 6 13 chrX 25807638 25807950 -140842346 - MuRRS4-int LTR ERV1 -118 4945 4636 3 781 844 191 0 6 chrX 25807941 25808099 -140842197 - MuRRS4-int LTR ERV1 -119 4944 4788 3 781 1779 174 20 34 chrX 25808222 25808621 -140841675 - RodERV21-int LTR ERV1 -2872 2191 1936 3 781 622 55 0 21 chrX 25808621 25808714 -140841582 + (TC)n Simple_repeat Simple_repeat 1 91 0 3 781 1241 222 42 92 chrX 25808714 25808790 -140841506 - RodERV21-int LTR ERV1 -2161 1138 1062 3 781 1589 261 33 7 chrX 25808773 25809197 -140841099 - MuRRS4-int LTR ERV1 -3617 1446 1012 3 781 781 249 16 74 chrX 25809344 25809600 -140840696 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 3 781 580 139 111 17 chrX 25809600 25809717 -140840579 - MuRRS4-int LTR ERV1 -4186 877 750 3 781 416 191 10 69 chrX 25809701 25809802 -140840494 - RMER16-int LTR ERVK -3958 1448 1354 3 781 4327 134 26 4 chrX 25809905 25810587 -140839709 - RMER16-int LTR ERVK -4045 1361 665 3 781 1202 244 65 22 chrX 25810607 25810929 -140839367 - MuRRS4-int LTR ERV1 -4388 675 340 3 781 622 249 56 83 chrX 25811263 25811813 -140838483 - MuRRS4-int LTR ERV1 -4565 498 5 3 781 638 270 76 47 chrX 25811815 25812091 -140838205 - LTRIS4 LTR ERV1 0 507 224 3 781 321 93 0 0 chrX 25812692 25812746 -140837550 + (A)n Simple_repeat Simple_repeat 1 54 0 3 781 426 332 52 63 chrX 25812898 25813374 -140836922 - RodERV21-int LTR ERV1 -3035 4056 3586 3 781 1353 286 21 56 chrX 25813498 25813928 -140836368 - RodERV21-int LTR ERV1 -2273 2718 2304 3 781 4681 101 23 0 chrX 25813933 25814598 -140835698 - L1_Mus3 LINE L1 -247 6391 5712 3 781 1514 149 0 0 chrX 25814600 25814828 -140835468 + L1_Mus3 LINE L1 5473 5700 -183 3 781 1746 176 9 21 chrX 25814829 25815155 -140835141 - RLTR14 LTR ERV1 -54 328 7 3 781 545 172 0 11 chrX 25815180 25815274 -140835022 - RLTR14-int LTR ERV1 -5 5312 5220 3 781 1639 178 118 6 chrX 25815297 25815654 -140834642 - RLTR14-int LTR ERV1 -205 5112 4716 3 781 1923 112 27 66 chrX 25815654 25815989 -140834307 - RLTRETN_Mm LTR ERVK 0 322 1 3 781 10394 156 56 55 chrX 25815989 25819394 -140830902 - MMETn-int LTR ERVK 0 4844 1 3 781 232 273 32 54 chrX 25819408 25819501 -140830795 - RLTRETN_Mm LTR ERVK -15 394 304 3 97 31587 81 4 17 chrX 25819501 25824414 -140825882 - L1Md_F LINE L1 -522 5361 519 3 782 5485 93 3 1 chrX 25824415 25825147 -140825149 - L1Md_F LINE L1 -5494 1025 293 3 782 376 157 0 6 chrX 25825205 25825290 -140825006 + MMETn-int LTR ERVK 2473 2546 -2298 3 782 4681 71 0 7 chrX 25825290 25825891 -140824405 + L1Md_F2 LINE L1 5954 6554 -28 3 782 3929 34 5 0 chrX 25825891 25826330 -140823966 + L1Md_T LINE L1 6140 6580 -2 3 782 248 0 0 30 chrX 25826356 25826389 -140823907 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 3 782 3044 188 15 40 chrX 25826401 25827316 -140822980 + MMETn-int LTR ERVK 2541 3719 -1125 3 782 779 195 0 0 chrX 25827311 25827434 -140822862 + MMETn-int LTR ERVK 6539 6661 -745 3 782 3520 201 50 18 chrX 25827465 25828206 -140822090 - RLTR14-int LTR ERV1 -2117 3200 2436 3 782 1766 230 59 35 chrX 25829661 25830183 -140820113 + RLTR40 LTR ERVK 22 556 -261 3 782 485 141 10 0 chrX 25830185 25830284 -140820012 + GA-rich Low_complexity Low_complexity 2 101 0 3 782 544 297 52 44 chrX 25830284 25830471 -140819825 + RLTR40 LTR ERVK 566 752 -65 3 782 6612 90 31 3 chrX 25830471 25830888 -140819408 - RLTR13B1 LTR ERVK 0 893 476 3 782 327 25 0 0 chrX 25830888 25830928 -140819368 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 782 6612 90 31 3 chrX 25830928 25831379 -140818917 - RLTR13B1 LTR ERVK -418 475 3 3 782 544 297 52 44 chrX 25831379 25831441 -140818855 + RLTR40 LTR ERVK 753 817 0 3 782 342 0 0 0 chrX 25831632 25831670 -140818626 + (TAA)n Simple_repeat Simple_repeat 2 39 0 3 782 695 226 57 10 chrX 25833200 25833392 -140816904 - Lx9 LINE L1 -243 7401 7201 3 782 329 226 0 0 chrX 25833392 25833476 -140816820 + Lx9 LINE L1 7554 7637 -7 3 782 442 275 14 7 chrX 25833485 25833628 -140816668 + Lx5 LINE L1 6825 6968 -82 3 782 321 26 0 0 chrX 25833643 25833681 -140816615 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 3 782 616 229 34 14 chrX 25833693 25833839 -140816457 + B1_Mur2 SINE Alu 1 149 0 3 782 1884 160 27 0 chrX 25833868 25834206 -140816090 + L1_Mus3 LINE L1 6284 6630 -8 3 782 29 47 0 0 chrX 25834219 25834262 -140816034 + AT_rich Low_complexity Low_complexity 1 43 0 3 782 222 192 0 71 chrX 25834328 25834384 -140815912 + A-rich Low_complexity Low_complexity 4 55 0 3 782 693 270 19 14 chrX 25834393 25834607 -140815689 + Lx4B LINE L1 6809 7023 -35 3 782 2760 173 32 2 chrX 25834643 25835235 -140815061 - L1_Mur2 LINE L1 -1176 4701 4092 3 782 10012 142 39 22 chrX 25835237 25836604 -140813692 - RLTR22_Mur LTR ERVK -2 1846 461 3 782 450 54 27 13 chrX 25836604 25836679 -140813617 + (TAG)n Simple_repeat Simple_repeat 3 78 0 3 782 10012 142 39 22 chrX 25836679 25837126 -140813170 - RLTR22_Mur LTR ERVK -1388 460 3 3 782 731 173 207 0 chrX 25837126 25837363 -140812933 - L1_Mur2 LINE L1 -1782 4095 3810 3 782 1398 136 16 4 chrX 25837410 25837653 -140812643 + L1_Mus4 LINE L1 6391 6636 0 3 782 203 54 26 51 chrX 25837658 25837697 -140812599 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 3 782 225 0 0 0 chrX 25838142 25838167 -140812129 + (CAAAG)n Simple_repeat Simple_repeat 3 27 0 3 782 280 259 45 22 chrX 25839869 25840003 -140810293 + L1_Mur2 LINE L1 4334 4470 -1407 3 782 783 335 27 11 chrX 25840034 25840426 -140809870 + Lx6 LINE L1 6506 7284 -176 3 782 1471 189 20 90 chrX 25840418 25840872 -140809424 - L1_Mur2 LINE L1 -2136 3741 3320 3 782 1238 57 0 0 chrX 25840873 25841031 -140809265 - L1_Mus1 LINE L1 0 6567 6410 3 782 2363 99 0 0 chrX 25841031 25841385 -140808911 - L1_Mus1 LINE L1 -431 6136 5783 3 782 235 324 177 14 chrX 25841396 25841537 -140808759 - LTR82A LTR ERVL -172 700 537 3 782 288 314 0 0 chrX 25841687 25841757 -140808539 - LTR82A LTR ERVL -680 192 123 3 782 180 322 55 94 chrX 25841796 25841923 -140808373 + L2a LINE L2 3305 3426 0 3 782 21 0 0 0 chrX 25841965 25841986 -140808310 + AT_rich Low_complexity Low_complexity 1 21 0 3 782 20079 139 6 4 chrX 25842450 25845109 -140805187 - L1_Mm LINE L1 -86 5797 3134 3 782 207 0 0 0 chrX 25845109 25845132 -140805164 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 782 20079 139 6 4 chrX 25845132 25845970 -140804326 - L1_Mm LINE L1 -2750 3133 2295 3 782 1307 183 52 0 chrX 25845971 25846222 -140804074 + L1VL1 LINE L1 3 266 -6156 3 782 4593 147 30 19 chrX 25846222 25847522 -140802774 + L1Md_F LINE L1 277 1591 -4292 3 782 2727 64 1 74 chrX 25847514 25848168 -140802128 + L1Md_F2 LINE L1 5432 6015 -567 3 782 1850 153 26 6 chrX 25848168 25848516 -140801780 - ETnERV2-int LTR ERVK -3611 3795 3441 3 782 746 156 12 53 chrX 25848743 25848912 -140801384 - ETnERV2-int LTR ERVK -2657 2187 2026 3 782 496 97 14 0 chrX 25848920 25848992 -140801304 + L1Md_F2 LINE L1 5513 5585 -298 3 782 7818 60 1 2 chrX 25848993 25849976 -140800320 + L1Md_F2 LINE L1 5587 6568 -14 3 782 2496 202 50 56 chrX 25849977 25850940 -140799356 - ETnERV2-int LTR ERVK -4271 3135 1934 3 782 1423 260 34 7 chrX 25851186 25851601 -140798695 + MuRRS4-int LTR ERV1 1019 1444 -3619 3 782 7392 141 42 80 chrX 25851639 25853913 -140796383 + RLTR1B-int LTR ERV1 1116 4271 -792 3 782 674 217 0 6 chrX 25853904 25854062 -140796234 + RLTR1B-int LTR ERV1 4788 4944 -119 3 782 993 267 13 10 chrX 25854053 25854352 -140795944 + MuRRS4-int LTR ERV1 4636 4935 -128 3 782 2241 348 29 36 chrX 25854934 25856539 -140793757 + RodERV21-int LTR ERV1 2905 4498 -493 3 782 2345 145 17 38 chrX 25856544 25856961 -140793335 + RLTR9B2 LTR ERVK 3 410 -10 3 782 740 143 8 8 chrX 25856963 25857083 -140793213 + RLTR9B2 LTR ERVK 301 420 0 3 782 716 279 31 11 chrX 25857089 25857375 -140792921 + RodERV21-int LTR ERV1 4502 4793 -198 3 782 862 134 0 72 chrX 25857822 25857975 -140792321 + B1_Mus1 SINE Alu 7 148 0 3 782 876 247 32 56 chrX 25858049 25858711 -140791585 + L1Md_F2 LINE L1 217 1040 -5684 3 782 30832 59 2 2 chrX 25858709 25862928 -140787368 + L1Md_F2 LINE L1 1367 5586 -297 3 782 7401 67 21 0 chrX 25862928 25863892 -140786404 + L1Md_F2 LINE L1 5587 6570 -12 3 782 1200 202 86 48 chrX 25863892 25864320 -140785976 + RLTR21 LTR ERVK 707 1254 -150 3 782 2401 101 6 3 chrX 25864557 25864916 -140785380 - BGLII LTR ERVK 0 421 62 3 782 2400 217 109 6 chrX 25864923 25865745 -140784551 - MYSERV16_I-int LTR ERVK -112 2214 1308 3 782 2151 196 87 78 chrX 25865768 25866103 -140784193 - RMER3D-int LTR ERVK -1164 1678 1384 3 782 3236 53 2 0 chrX 25866103 25866498 -140783798 + MTA_Mm LTR MaLR 1 396 0 3 782 2151 196 87 78 chrX 25866498 25866819 -140783477 - RMER3D-int LTR ERVK -1459 1383 1016 3 782 428 202 0 68 chrX 25866867 25867058 -140783238 + CT-rich Low_complexity Low_complexity 2 179 0 3 782 400 189 0 0 chrX 25867081 25867155 -140783141 - RMER3D-int LTR ERVK -2280 562 489 3 782 543 186 16 35 chrX 25867227 25867374 -140782922 - RMER3D-int LTR ERVK -2069 773 650 3 782 558 223 25 40 chrX 25867464 25867665 -140782631 - RMER3D-int LTR ERVK -1993 849 652 3 782 418 146 0 0 chrX 25867683 25867768 -140782528 - RMER3D-int LTR ERVK -2279 563 489 3 782 668 246 106 0 chrX 25868054 25868253 -140782043 - MER2 DNA MER2_type -118 227 8 3 782 843 161 62 19 chrX 25868420 25868629 -140781667 + L1_Mm LINE L1 5234 5451 -432 3 782 571 292 22 100 chrX 25868675 25869153 -140781143 + L1_Mus1 LINE L1 273 693 -5941 3 782 448 258 6 32 chrX 25869184 25869340 -140780956 + L1Md_F LINE L1 578 729 -5790 3 782 2084 202 13 0 chrX 25869321 25869796 -140780500 + L1Md_F LINE L1 628 1108 -5411 3 782 24484 127 13 56 chrX 25869793 25875588 -140774708 + L1_Mus1 LINE L1 1071 6567 0 3 782 4307 168 17 5 chrX 25875602 25876415 -140773881 + Lx2 LINE L1 5823 6645 -352 3 782 1155 174 18 0 chrX 25876410 25876628 -140773668 + Lx2 LINE L1 6770 6991 -6 3 782 380 235 39 19 chrX 25876919 25877023 -140773273 - ID_B1 SINE B4 -2 222 117 3 782 5622 190 38 9 chrX 25877023 25878546 -140771750 - Lx3C LINE L1 -57 6919 5354 3 782 9970 181 30 12 chrX 25878559 25881551 -140768745 + Lx4A LINE L1 3725 6779 -279 3 782 299 395 24 30 chrX 25881917 25882421 -140767875 - RMER1C Other Other -477 865 374 3 782 365 423 12 0 chrX 25882528 25882774 -140767522 - RMER1C Other Other -673 669 421 3 782 324 407 25 18 chrX 25883039 25883314 -140766982 - RMER1C Other Other -602 740 464 3 782 254 428 12 26 chrX 25883430 25883773 -140766523 - RMER1C Other Other -496 846 509 3 782 275 421 17 21 chrX 25884398 25884751 -140765545 - RMER1C Other Other -617 725 378 3 782 250 410 26 1 chrX 25885384 25885564 -140764732 - RMER1C Other Other -618 724 419 3 782 25732 20 0 0 chrX 25885644 25890510 -140759786 - L1Md_A LINE L1 0 6582 1717 4 782 324 0 0 0 chrX 25891470 25891506 -140758790 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 782 459 0 0 0 chrX 25891506 25891556 -140758740 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 782 550 369 43 20 chrX 25892127 25892473 -140757823 - RMER1C Other Other -468 874 521 4 782 274 408 31 28 chrX 25892988 25893627 -140756669 - RMER1C Other Other -457 885 370 4 782 3416 164 8 3 chrX 25895064 25895712 -140754584 + L1Md_A LINE L1 444 1094 -5633 4 782 19720 79 148 2 chrX 25895710 25898858 -140751438 + L1Md_A LINE L1 1980 5589 -297 4 782 7561 68 1 5 chrX 25898858 25899846 -140750450 + L1Md_F2 LINE L1 5587 6570 -12 4 782 19720 95 14147 0 chrX 25899846 25900161 -140750135 + L1Md_A LINE L1 5590 5597 -289 4 782 3809 65 0 0 chrX 25900127 25900684 -140749612 + L1_Mm LINE L1 1203 1759 -4124 4 782 812 127 35 21 chrX 25900688 25900833 -140749463 - L1_Mus1 LINE L1 0 6567 6421 4 782 325 299 56 70 chrX 25901112 25901396 -140748900 - RMER17C LTR ERVK -48 362 83 4 782 5828 131 7 28 chrX 25901860 25902827 -140747469 + Lx3A LINE L1 6028 6974 -7 4 782 224 327 62 37 chrX 25904143 25904305 -140745991 + L2 LINE L2 1494 1659 -1760 4 782 181 347 52 10 chrX 25904665 25904761 -140745535 + L2 LINE L2 1926 2025 -1394 4 782 570 326 40 18 chrX 25904775 25904992 -140745304 - B4A SINE B4 -2 290 75 4 782 228 86 0 0 chrX 25905028 25905063 -140745233 + (TGG)n Simple_repeat Simple_repeat 1 35 0 4 782 320 302 159 73 chrX 25905159 25905391 -140744905 + L2 LINE L2 2049 2300 -1119 4 782 4424 140 14 20 chrX 25905396 25906193 -140744103 + YREP_Mm Unknown Unknown 986 1777 -35 4 782 456 289 0 0 chrX 25907036 25907140 -140743156 + B3 SINE B2 98 201 -15 4 782 385 252 75 8 chrX 25907200 25907320 -140742976 + B1F SINE Alu 21 148 -1 4 782 958 231 19 0 chrX 25907466 25907678 -140742618 + B3 SINE B2 1 216 0 4 782 659 322 92 33 chrX 25907908 25908181 -140742115 + B4A SINE B4 4 292 0 4 782 13429 175 73 64 chrX 25908307 25911017 -140739279 + L1VL2 LINE L1 300 2796 -3087 4 782 985 104 0 0 chrX 25911017 25911151 -140739145 + B1_Mus2 SINE Alu 1 134 -13 4 782 13429 159 85 60 chrX 25911151 25912951 -140737345 + L1VL2 LINE L1 2797 4756 -1127 4 782 5226 145 19 1 chrX 25912952 25913803 -140736493 + Lx LINE L1 5787 6652 -2 4 782 27 81 0 0 chrX 25913861 25913923 -140736373 + AT_rich Low_complexity Low_complexity 1 62 0 4 782 642 26 0 0 chrX 25915103 25915179 -140735117 + (TC)n Simple_repeat Simple_repeat 2 77 0 4 782 255 31 0 0 chrX 25915180 25915212 -140735084 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 782 273 269 95 69 chrX 25915532 25915648 -140734648 + B1F SINE Alu 29 147 -2 4 782 2826 9 0 0 chrX 25915666 25915995 -140734301 - L1Md_A LINE L1 -259 5624 5296 4 782 8377 4 0 6 chrX 25915995 25916932 -140733364 + L1Md_A LINE L1 5652 6582 0 4 782 238 302 101 28 chrX 25916940 25917049 -140733247 + B1F SINE Alu 1 117 -32 4 782 767 294 39 24 chrX 25917824 25918030 -140732266 - B3 SINE B2 -6 210 2 4 782 1000 112 7 0 chrX 25918286 25918429 -140731867 - B1_Mus1 SINE Alu -1 147 4 4 782 358 222 158 20 chrX 25918430 25918531 -140731765 - B4A SINE B4 -62 230 116 4 782 225 0 0 0 chrX 25918888 25918913 -140731383 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 4 782 21 36 0 0 chrX 25919276 25919304 -140730992 + AT_rich Low_complexity Low_complexity 1 28 0 4 782 298 331 49 8 chrX 25919552 25919674 -140730622 - B1F SINE Alu -3 146 20 4 782 19156 160 4 3 chrX 25919925 25923572 -140726724 + L1_Mm LINE L1 1445 5096 -787 4 782 39223 10 0 6 chrX 25923572 25929960 -140720336 - L1Md_A LINE L1 0 6582 237 4 782 360 213 0 13 chrX 25930104 25930180 -140720116 - ID_B1 SINE B4 -2 222 148 4 782 3207 212 53 19 chrX 25930201 25931012 -140719284 - Lx3C LINE L1 -12 6964 6126 4 782 1738 14 0 0 chrX 25931009 25931217 -140719079 - L1Md_T LINE L1 -367 5516 5309 4 782 594 64 0 0 chrX 25931212 25931290 -140719006 + L1Md_T LINE L1 5509 5586 -297 4 782 8347 38 0 1 chrX 25931290 25932287 -140718009 + L1Md_T LINE L1 5587 6582 0 4 782 5164 198 58 13 chrX 25932291 25933810 -140716486 + Lx4A LINE L1 5184 6779 -279 4 782 273 332 10 31 chrX 25934175 25934316 -140715980 - RMER1C Other Other -540 802 651 4 782 235 404 25 20 chrX 25934481 25934678 -140715618 - RMER1C Other Other -585 757 560 4 782 456 415 12 0 chrX 25934787 25935040 -140715256 - RMER1C Other Other -523 819 564 4 782 22 0 0 0 chrX 25935190 25935212 -140715084 + AT_rich Low_complexity Low_complexity 1 22 0 4 782 281 405 36 29 chrX 25935304 25935579 -140714717 - RMER1C Other Other -602 740 464 4 782 289 427 8 12 chrX 25935798 25936040 -140714256 - RMER1C Other Other -593 749 509 4 782 263 415 19 27 chrX 25936696 25937057 -140713239 - RMER1C Other Other -536 806 378 4 782 246 411 42 5 chrX 25937678 25937871 -140712425 - RMER1C Other Other -681 661 462 4 782 636 14 0 0 chrX 25938898 25938971 -140711325 + (TA)n Simple_repeat Simple_repeat 2 74 0 4 782 230 403 35 22 chrX 25939080 25939311 -140710985 - RMER1C Other Other -605 737 504 4 782 496 378 43 20 chrX 25939539 25939885 -140710411 - RMER1C Other Other -468 874 521 4 782 277 422 23 17 chrX 25940389 25940736 -140709560 - RMER1C Other Other -507 835 487 4 782 3907 193 21 4 chrX 25942467 25943311 -140706985 + L1Md_A LINE L1 233 1091 -5633 4 782 2626 102 0 2 chrX 25943309 25943703 -140706593 + L1Md_A LINE L1 1977 2369 -3514 4 782 21098 60 1 3 chrX 25943710 25946432 -140703864 + L1Md_A LINE L1 2845 5562 -321 4 782 446 91 0 0 chrX 25946432 25946498 -140703798 + L1Md_F2 LINE L1 6505 6570 -12 4 782 3792 89 0 25 chrX 25946499 25947359 -140702937 + L1Md_Gf LINE L1 828 1762 -4124 4 782 827 118 37 0 chrX 25947372 25947508 -140702788 - L1_Mus1 LINE L1 -6 6561 6421 4 782 265 326 57 64 chrX 25947787 25948069 -140702227 - RMER17C LTR ERVK -48 362 83 4 782 24 67 0 0 chrX 25948460 25948505 -140701791 + AT_rich Low_complexity Low_complexity 1 45 0 4 782 5850 132 12 27 chrX 25948506 25949499 -140700797 + Lx3A LINE L1 5997 6974 -7 4 782 208 311 71 64 chrX 25950837 25950978 -140699318 + L2 LINE L2 1518 1659 -1760 4 782 197 337 52 10 chrX 25951341 25951437 -140698859 + L2 LINE L2 1926 2025 -1394 4 782 562 326 40 15 chrX 25951450 25951657 -140698639 - B4A SINE B4 -2 290 83 4 782 200 180 32 16 chrX 25951658 25951720 -140698576 + (TTG)n Simple_repeat Simple_repeat 1 63 0 4 782 359 333 116 34 chrX 25951817 25952050 -140698246 + L2 LINE L2 2049 2300 -1119 4 97 4658 129 12 19 chrX 25952055 25952852 -140697444 + YREP_Mm Unknown Unknown 986 1777 -35 4 783 432 289 26 0 chrX 25953704 25953818 -140696478 + B3 SINE B2 98 214 -2 4 783 362 261 75 8 chrX 25953874 25953994 -140696302 + B1F SINE Alu 21 148 -1 4 783 956 231 19 0 chrX 25954140 25954352 -140695944 + B3 SINE B2 1 216 0 4 783 654 327 86 22 chrX 25954583 25954852 -140695444 + B4A SINE B4 4 289 -3 4 783 27 0 0 0 chrX 25954870 25954897 -140695399 + AT_rich Low_complexity Low_complexity 1 27 0 4 783 16888 176 32 61 chrX 25954982 25957682 -140692614 + L1VL2 LINE L1 300 2807 -3076 4 783 957 119 0 0 chrX 25957682 25957816 -140692480 + B1_Mus2 SINE Alu 1 134 -13 4 783 16888 163 17 53 chrX 25957816 25959843 -140690453 + L1VL2 LINE L1 2808 4752 -1131 4 783 5154 141 28 1 chrX 25959844 25960691 -140689605 + Lx LINE L1 5783 6652 -2 4 783 21 82 0 0 chrX 25960780 25960829 -140689467 + AT_rich Low_complexity Low_complexity 1 49 0 4 783 22 35 0 0 chrX 25961649 25961678 -140688618 + AT_rich Low_complexity Low_complexity 1 29 0 4 783 432 0 0 0 chrX 25961966 25962014 -140688282 + (TC)n Simple_repeat Simple_repeat 2 49 0 4 783 432 0 0 0 chrX 25962015 25962063 -140688233 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 783 24 0 0 0 chrX 25962342 25962366 -140687930 + AT_rich Low_complexity Low_complexity 1 24 0 4 783 254 278 134 60 chrX 25962366 25962500 -140687796 + B1F SINE Alu 4 147 -2 4 783 239 302 54 78 chrX 25962495 25962515 -140687781 + ID_B1 SINE B4 70 195 -29 4 783 266 274 101 28 chrX 25962515 25962624 -140687672 + B1F SINE Alu 1 117 -32 4 783 776 285 44 29 chrX 25963407 25963613 -140686683 - B3 SINE B2 -6 210 2 4 783 942 133 7 0 chrX 25963864 25964007 -140686289 - B1_Mus1 SINE Alu -1 147 4 4 783 373 256 160 10 chrX 25964008 25964208 -140686088 - B4 SINE B4 -62 230 1 4 783 274 283 98 0 chrX 25964470 25964562 -140685734 - BC1_Mm scRNA scRNA -48 104 4 4 783 21 36 0 0 chrX 25964860 25964888 -140685408 + AT_rich Low_complexity Low_complexity 1 28 0 4 783 321 322 49 8 chrX 25965136 25965258 -140685038 - B1F SINE Alu -3 146 20 4 783 24948 150 6 1 chrX 25965508 25970677 -140679619 + L1_Mus3 LINE L1 1445 6634 -4 4 783 231 114 0 0 chrX 25971108 25971143 -140679153 + (A)n Simple_repeat Simple_repeat 1 35 0 4 783 447 148 0 0 chrX 25971314 25971381 -140678915 + (TATATG)n Simple_repeat Simple_repeat 6 72 0 4 783 186 43 0 0 chrX 25971381 25971404 -140678892 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 783 447 148 0 0 chrX 25971404 25971417 -140678879 + (TATATG)n Simple_repeat Simple_repeat 5 17 0 4 783 279 281 24 35 chrX 25971987 25972072 -140678224 + B4A SINE B4 82 165 -127 4 783 242 352 22 11 chrX 25972999 25973088 -140677208 - B3 SINE B2 -14 202 113 4 783 452 298 65 13 chrX 25973173 25973326 -140676970 - B3 SINE B2 -53 163 3 4 783 426 20 0 0 chrX 25973410 25973461 -140676835 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 783 18522 134 23 152 chrX 25973576 25979472 -140670824 - L1_Mus1 LINE L1 0 6567 1492 4 783 6585 160 28 15 chrX 25979470 25980805 -140669491 - L1_Mus3 LINE L1 -690 5948 4602 4 783 630 205 43 0 chrX 25980802 25980919 -140669377 - Lx4A LINE L1 -228 6830 6709 4 783 2186 265 68 3 chrX 25981775 25982381 -140667915 - Lx2B LINE L1 -14 6986 6342 4 783 3054 160 67 15 chrX 25982378 25982539 -140667757 + L1_Mur2 LINE L1 4537 4730 -1147 4 783 378 0 0 0 chrX 25982539 25982581 -140667715 + (TAA)n Simple_repeat Simple_repeat 1 42 0 4 783 3054 160 67 15 chrX 25982581 25983029 -140667267 + L1_Mur2 LINE L1 4731 5178 -699 4 783 398 193 22 11 chrX 25983202 25983291 -140667005 - URR1B DNA MER1_type 0 225 136 5 783 24 32 0 0 chrX 25983395 25983426 -140666870 + AT_rich Low_complexity Low_complexity 1 31 0 5 783 3026 240 22 14 chrX 25983566 25984558 -140665738 - Lx6 LINE L1 -1352 6108 5105 5 783 1191 220 37 9 chrX 25984563 25984889 -140665407 - Lx6 LINE L1 -2035 3845 3511 5 783 619 270 57 24 chrX 25984889 25985051 -140665245 - Lx6 LINE L1 -3397 2480 2324 5 783 567 0 0 0 chrX 25985051 25985114 -140665182 + (TC)n Simple_repeat Simple_repeat 2 64 0 5 783 619 270 57 24 chrX 25985114 25985160 -140665136 - Lx6 LINE L1 -3554 2323 2266 5 783 594 308 64 32 chrX 25985166 25985384 -140664912 - ORR1D2 LTR MaLR -145 225 1 5 783 457 393 4 0 chrX 25985386 25985620 -140664676 + Lx8 LINE L1 6956 7190 -283 5 783 973 287 47 22 chrX 25985723 25986083 -140664213 + ORR1D2 LTR MaLR 1 369 -1 5 783 496 256 8 8 chrX 25986238 25986360 -140663936 + Lx8 LINE L1 6640 6761 -712 5 783 230 221 14 29 chrX 25986627 25986697 -140663599 - Lx9 LINE L1 -1398 6246 6178 5 783 262 445 0 0 chrX 25986761 25986898 -140663398 + RMER1C Other Other 536 672 -670 5 783 350 411 6 6 chrX 25987221 25987402 -140662894 + RMER1C Other Other 537 717 -625 5 783 268 461 0 0 chrX 25987445 25987675 -140662621 + RMER1C Other Other 412 641 -701 5 783 560 10 40 30 chrX 25988105 25988205 -140662091 + (CAAAAA)n Simple_repeat Simple_repeat 3 103 0 5 783 289 331 138 19 chrX 25988321 25988481 -140661815 + RMER1C Other Other 488 666 -676 5 783 10839 112 6 20 chrX 25988990 25991497 -140658799 - L1Md_A LINE L1 -3185 2698 233 5 783 207 0 0 0 chrX 25992644 25992667 -140657629 + (A)n Simple_repeat Simple_repeat 1 23 0 5 783 361 426 27 24 chrX 25992953 25993626 -140656670 + RMER1C Other Other 487 885 -457 5 783 234 389 79 20 chrX 25993767 25993919 -140656377 + RMER1C Other Other 540 700 -642 5 783 630 407 36 29 chrX 25994107 25994907 -140655389 + RMER1C Other Other 375 882 -460 5 783 405 0 0 0 chrX 25995036 25995081 -140655215 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 783 358 415 47 21 chrX 25995336 25996300 -140653996 + RMER1C Other Other 378 898 -444 5 783 319 414 40 50 chrX 25996908 25997463 -140652833 + RMER1C Other Other 495 873 -469 5 783 331 425 14 33 chrX 25997937 25998300 -140651996 + RMER1C Other Other 398 753 -589 5 783 309 399 38 30 chrX 25998398 25998662 -140651634 + RMER1C Other Other 464 729 -613 5 783 21 0 0 0 chrX 25998766 25998787 -140651509 + AT_rich Low_complexity Low_complexity 1 21 0 5 783 413 431 13 10 chrX 25998878 25999187 -140651109 + RMER1C Other Other 510 819 -523 5 783 413 379 54 35 chrX 25999388 25999901 -140650395 + RMER1C Other Other 393 848 -494 5 783 10007 182 29 9 chrX 26000165 26003151 -140647145 - Lx4A LINE L1 -279 6779 3725 1 783 6188 184 36 6 chrX 26003163 26004727 -140645569 + Lx3C LINE L1 5353 6961 -15 2 783 477 0 0 0 chrX 26004729 26004782 -140645514 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 783 986 178 0 0 chrX 26004782 26004962 -140645334 - Lx2 LINE L1 -43 6954 6775 4 783 4273 165 21 4 chrX 26004960 26005770 -140644526 - Lx2 LINE L1 -352 6645 5822 4 783 4626 91 5 5 chrX 26005781 26006425 -140643871 - L1_Mus1 LINE L1 0 6567 5924 5 783 10723 47 10 16 chrX 26006425 26009037 -140641259 + L1Md_T LINE L1 8 2602 -3281 6 783 9866 26 0 0 chrX 26009027 26010240 -140640056 + L1Md_T LINE L1 4375 5587 -296 6 783 8374 37 0 0 chrX 26010241 26011234 -140639062 + L1Md_T LINE L1 5589 6581 -1 6 783 23677 137 23 72 chrX 26011247 26016752 -140633544 - L1_Mus1 LINE L1 -630 5937 725 5 783 517 224 37 0 chrX 26016761 26016895 -140633401 - L1_Mus1 LINE L1 -5814 802 664 5 783 472 299 21 114 chrX 26016948 26017621 -140632675 - L1VL1 LINE L1 -5919 503 1 7 783 870 162 63 14 chrX 26017658 26017865 -140632431 - L1_Mm LINE L1 -432 5451 5235 8 783 993 280 84 0 chrX 26018027 26018323 -140631973 + MER2 DNA MER2_type 1 321 -24 9 783 784 293 10 0 chrX 26018733 26018938 -140631358 + B3 SINE B2 1 207 -9 1 783 558 29 0 0 chrX 26019020 26019088 -140631208 + (TTCC)n Simple_repeat Simple_repeat 3 70 0 1 783 615 282 51 6 chrX 26019179 26019357 -140630939 - B3A SINE B2 -12 186 1 1 783 645 258 51 29 chrX 26019662 26019937 -140630359 + Lx7 LINE L1 5857 6137 -1559 1 783 1718 279 47 17 chrX 26019973 26020550 -140629746 + Lx7 LINE L1 6061 6654 -1042 1 783 434 159 0 0 chrX 26020814 26020902 -140629394 + RMER3D-int LTR ERVK 489 564 -2278 1 783 581 218 25 40 chrX 26020917 26021118 -140629178 + RMER3D-int LTR ERVK 652 849 -1993 1 783 531 219 30 35 chrX 26021204 26021539 -140628757 + RMER3D-int LTR ERVK 354 804 -2038 1 783 481 116 80 27 chrX 26021541 26021691 -140628605 + GA-rich Low_complexity Low_complexity 3 160 0 1 783 2139 195 91 80 chrX 26021736 26022055 -140628241 + RMER3D-int LTR ERVK 1014 1383 -1459 1 783 3283 46 2 0 chrX 26022055 26022450 -140627846 - MTA_Mm LTR MaLR 0 396 1 1 783 2139 195 91 80 chrX 26022450 26022804 -140627492 + RMER3D-int LTR ERVK 1384 1694 -1148 1 783 2650 198 117 14 chrX 26022807 26023731 -140626565 + MYSERV16_I-int LTR ERVK 1308 2326 0 1 783 2814 92 19 2 chrX 26023731 26024145 -140626151 + BGLII LTR ERVK 1 421 0 1 783 1185 216 67 55 chrX 26024415 26024817 -140625479 - RLTR21 LTR ERVK -460 1112 706 2 783 11021 96 4 1 chrX 26024817 26027144 -140623152 - L1Md_F2 LINE L1 -13 6569 4237 2 783 12865 115 5 18 chrX 26027140 26029915 -140620381 - L1Md_F2 LINE L1 -2718 3165 446 2 783 811 135 12 49 chrX 26029918 26030082 -140620214 - RLTR21 LTR ERVK -855 717 560 2 783 1482 226 18 39 chrX 26030132 26030463 -140619833 - RLTR21 LTR ERVK -1248 324 1 2 783 282 289 0 17 chrX 26030842 26030958 -140619338 - Lx6 LINE L1 -15 7445 7332 2 783 1103 278 22 32 chrX 26030958 26031192 -140619104 - Lx6 LINE L1 -1326 6134 5904 2 783 2069 196 17 14 chrX 26031192 26031612 -140618684 - MTC LTR MaLR 0 421 1 2 783 1103 278 22 32 chrX 26031612 26031838 -140618458 - Lx6 LINE L1 -1557 5903 5679 2 783 1094 192 28 3 chrX 26031863 26032145 -140618151 - L1_Mur3 LINE L1 -2593 3287 2999 2 783 3684 142 21 24 chrX 26032146 26032677 -140617619 - L1_Mus3 LINE L1 -7 6631 6101 2 783 2413 75 62 3 chrX 26032677 26033000 -140617296 - ORR1A1 LTR MaLR -4 342 1 2 783 3684 142 21 24 chrX 26033000 26033124 -140617172 - L1_Mus3 LINE L1 -538 6100 5978 2 783 2388 51 3 13 chrX 26033124 26033440 -140616856 + L1Md_F2 LINE L1 5273 5585 -298 2 783 7166 76 8 13 chrX 26033441 26034440 -140615856 + L1Md_F2 LINE L1 5587 6580 -2 2 783 251 158 34 34 chrX 26035767 26035826 -140614470 + GA-rich Low_complexity Low_complexity 2 60 0 2 783 373 245 27 47 chrX 26035984 26036134 -140614162 - L1_Rod LINE L1 -305 5542 5396 2 783 2225 201 76 38 chrX 26036153 26036706 -140613590 + RLTR31A_Mm LTR ERVK 11 584 0 3 783 265 196 107 10 chrX 26036706 26036809 -140613487 - L1_Rod LINE L1 -475 5372 5260 2 783 821 158 6 70 chrX 26036946 26037103 -140613193 - B1_Mus1 SINE Alu 0 148 2 3 783 394 182 10 20 chrX 26037544 26037645 -140612651 - RodERV21-int LTR ERV1 -198 4793 4694 3 783 25715 81 1 21 chrX 26037646 26042097 -140608199 - L1Md_F LINE L1 -1007 4876 519 3 783 6457 94 2 6 chrX 26042098 26043033 -140607263 - L1Md_F LINE L1 -5494 1025 95 3 783 391 145 0 6 chrX 26043097 26043189 -140607107 + MMETn-int LTR ERVK 2473 2553 -2291 3 783 4511 61 0 8 chrX 26043190 26043787 -140606509 + L1Md_F2 LINE L1 5966 6557 -25 3 783 3610 46 0 0 chrX 26043787 26044225 -140606071 + L1Md_T LINE L1 6144 6581 -1 3 783 316 16 82 0 chrX 26044254 26044315 -140605981 + (CAA)n Simple_repeat Simple_repeat 2 67 0 3 783 2751 187 16 41 chrX 26044315 26045226 -140605070 + MMETn-int LTR ERVK 2540 3719 -1125 3 783 713 203 0 0 chrX 26045221 26045344 -140604952 + MMETn-int LTR ERVK 6539 6661 -745 3 783 3208 198 50 19 chrX 26045375 26046117 -140604179 - RLTR14-int LTR ERV1 -2117 3200 2436 3 783 1981 236 122 89 chrX 26047564 26047854 -140602442 + RLTR40 LTR ERVK 22 308 -509 4 783 1220 48 0 0 chrX 26047854 26048001 -140602295 + B1_Mm SINE Alu 1 147 0 4 783 1981 236 122 89 chrX 26048001 26048263 -140602033 + RLTR40 LTR ERVK 309 571 -246 4 783 959 106 6 0 chrX 26048263 26048423 -140601873 + (GA)n Simple_repeat Simple_repeat 2 162 0 4 783 1981 236 122 89 chrX 26048423 26048577 -140601719 + RLTR40 LTR ERVK 572 752 -65 4 783 6239 87 31 2 chrX 26048577 26048993 -140601303 - RLTR13B1 LTR ERVK 0 893 476 4 783 642 26 0 0 chrX 26048993 26049069 -140601227 + (TG)n Simple_repeat Simple_repeat 2 77 0 4 783 6239 87 31 2 chrX 26049069 26049520 -140600776 - RLTR13B1 LTR ERVK -418 475 3 4 783 1981 236 122 89 chrX 26049520 26049582 -140600714 + RLTR40 LTR ERVK 753 817 0 4 783 450 0 0 0 chrX 26049773 26049823 -140600473 + (TAA)n Simple_repeat Simple_repeat 2 51 0 4 783 633 239 68 11 chrX 26051355 26051545 -140598751 - Lx9 LINE L1 -243 7401 7201 4 783 329 226 0 0 chrX 26051545 26051629 -140598667 + Lx9 LINE L1 7554 7637 -7 4 783 468 275 14 7 chrX 26051638 26051781 -140598515 + Lx5 LINE L1 6825 6968 -82 4 783 408 40 0 0 chrX 26051796 26051846 -140598450 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 4 783 556 239 35 14 chrX 26051858 26052002 -140598294 + B1_Mur2 SINE Alu 1 147 -2 4 783 1937 154 27 0 chrX 26052031 26052369 -140597927 + L1_Mus3 LINE L1 6284 6630 -8 5 783 28 48 0 0 chrX 26052382 26052424 -140597872 + AT_rich Low_complexity Low_complexity 1 42 0 5 783 235 200 0 68 chrX 26052490 26052549 -140597747 + A-rich Low_complexity Low_complexity 4 58 0 5 783 731 261 19 14 chrX 26052557 26052771 -140597525 + Lx4B LINE L1 6809 7023 -35 5 783 548 167 6 0 chrX 26052835 26053003 -140597293 + (TA)n Simple_repeat Simple_repeat 2 170 0 5 783 9626 141 41 8 chrX 26053008 26054262 -140596034 - RLTR22_Mur LTR ERVK -90 1758 461 5 783 430 57 0 28 chrX 26054262 26054334 -140595962 + (TAG)n Simple_repeat Simple_repeat 3 72 0 5 783 9626 141 41 8 chrX 26054334 26054780 -140595516 - RLTR22_Mur LTR ERVK -1388 460 4 5 783 577 216 204 0 chrX 26054781 26055012 -140595284 - L1_Mur2 LINE L1 -1784 4096 3819 5 783 1274 136 5 5 chrX 26055066 26055287 -140595009 + L1_Mus4 LINE L1 6391 6611 -25 5 783 225 0 0 0 chrX 26055795 26055820 -140594476 + (CAAAG)n Simple_repeat Simple_repeat 3 27 0 5 783 24 0 0 0 chrX 26057213 26057237 -140593059 + AT_rich Low_complexity Low_complexity 1 24 0 6 783 321 276 22 7 chrX 26057522 26057657 -140592639 + L1_Mur2 LINE L1 4334 4470 -1407 6 783 812 309 39 20 chrX 26057662 26058097 -140592199 + Lx6 LINE L1 6506 7296 -164 6 783 1478 186 20 90 chrX 26058074 26058528 -140591768 - L1_Mur2 LINE L1 -2136 3741 3320 5 783 1238 57 0 0 chrX 26058531 26058689 -140591607 - L1_Mus1 LINE L1 0 6567 6410 6 783 20528 131 5 3 chrX 26058689 26061685 -140588611 - L1_Mus1 LINE L1 -431 6136 3134 6 783 243 0 0 0 chrX 26061685 26061712 -140588584 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 783 20528 139 6 3 chrX 26061712 26062549 -140587747 - L1_Mus1 LINE L1 -2750 3133 2295 6 783 1331 179 52 0 chrX 26062550 26062801 -140587495 + L1_Mus1 LINE L1 219 482 -6156 6 783 4759 130 29 19 chrX 26062801 26064506 -140585790 + L1Md_F LINE L1 277 1998 -3885 6 783 34478 34 2 8 chrX 26064505 26069713 -140580583 + L1Md_T LINE L1 417 5586 -297 6 783 7749 43 40 0 chrX 26069713 26070669 -140579627 + L1Md_T LINE L1 5587 6580 -2 6 783 1419 120 8 0 chrX 26070670 26070911 -140579385 + L1_Mm LINE L1 1987 2229 -3654 6 783 408 240 24 8 chrX 26070910 26071036 -140579260 + L1Md_F LINE L1 578 705 -5814 6 783 2105 204 11 0 chrX 26071045 26071521 -140578775 + L1Md_F LINE L1 628 1108 -5411 6 783 24788 131 14 38 chrX 26071518 26077194 -140573102 + L1_Mus1 LINE L1 1071 6567 0 6 783 4202 180 16 4 chrX 26077207 26078020 -140572276 + Lx2 LINE L1 5823 6645 -352 7 783 1159 176 9 22 chrX 26078006 26078233 -140572063 + Lx2 LINE L1 6768 6991 -6 7 783 407 226 39 19 chrX 26078525 26078629 -140571667 - ID_B1 SINE B4 -2 222 117 7 783 5826 188 38 8 chrX 26078629 26080151 -140570145 - Lx3C LINE L1 -57 6919 5353 7 783 9936 186 29 9 chrX 26080163 26083150 -140567146 + Lx4A LINE L1 3725 6779 -279 7 784 310 394 25 31 chrX 26083512 26084020 -140566276 - RMER1C Other Other -458 884 374 7 784 344 427 12 0 chrX 26084128 26084376 -140565920 - RMER1C Other Other -671 671 421 7 784 318 401 26 19 chrX 26084652 26084916 -140565380 - RMER1C Other Other -613 729 464 7 784 287 425 12 29 chrX 26085032 26085376 -140564920 - RMER1C Other Other -496 846 509 7 784 272 433 13 17 chrX 26086040 26086393 -140563903 - RMER1C Other Other -617 725 378 7 784 271 411 25 4 chrX 26087026 26087221 -140563075 - RMER1C Other Other -581 761 419 7 784 317 420 44 15 chrX 26087343 26087866 -140562430 - RMER1C Other Other -478 864 412 8 784 798 11 0 0 chrX 26088230 26088321 -140561975 + (CA)n Simple_repeat Simple_repeat 2 92 0 8 784 330 26 0 0 chrX 26088321 26088359 -140561937 + (TA)n Simple_repeat Simple_repeat 1 39 0 8 784 490 398 34 24 chrX 26088474 26089276 -140561020 - RMER1C Other Other -460 882 375 8 784 3351 169 8 3 chrX 26091863 26092511 -140557785 + L1Md_F2 LINE L1 441 1091 -5633 8 784 2504 102 0 2 chrX 26092509 26092904 -140557392 + L1Md_F2 LINE L1 1977 2370 -3513 8 784 19305 77 0 1 chrX 26092915 26095652 -140554644 + L1Md_F2 LINE L1 2850 5585 -298 8 784 7808 60 4 2 chrX 26095653 26096646 -140553650 + L1Md_F2 LINE L1 5587 6581 -1 8 784 3853 70 1 0 chrX 26096646 26097475 -140552821 + L1Md_Gf LINE L1 833 1759 -4127 8 784 807 124 14 20 chrX 26097475 26097623 -140552673 - L1Md_F2 LINE L1 -7 6575 6429 8 784 303 303 56 70 chrX 26097904 26098188 -140552108 - RMER17C LTR ERVK -48 362 83 8 784 5785 134 6 28 chrX 26098652 26099620 -140550676 + Lx3A LINE L1 6028 6974 -7 8 784 39432 8 1 1 chrX 26100779 26107766 -140542530 - L1Md_A LINE L1 -2 6580 1 8 784 181 347 52 10 chrX 26108456 26108552 -140541744 + L2 LINE L2 1926 2025 -1394 9 784 539 322 42 15 chrX 26108574 26108774 -140541522 - B4A SINE B4 -9 283 83 9 784 228 86 0 0 chrX 26108820 26108855 -140541441 + (TGG)n Simple_repeat Simple_repeat 1 35 0 9 784 275 327 124 43 chrX 26108951 26109184 -140541112 + L2 LINE L2 2049 2300 -1119 9 784 4571 134 12 19 chrX 26109189 26109986 -140540310 + YREP_Mm Unknown Unknown 986 1777 -35 9 784 443 298 0 0 chrX 26110830 26110934 -140539362 + B3 SINE B2 98 201 -15 9 784 374 261 75 8 chrX 26110994 26111114 -140539182 + B1F SINE Alu 21 148 -1 9 784 927 237 19 0 chrX 26111260 26111467 -140538829 + B3 SINE B2 1 211 -5 9 784 620 319 95 37 chrX 26111702 26111975 -140538321 + B4A SINE B4 4 292 0 9 784 17307 177 36 48 chrX 26112109 26114792 -140535504 + L1VL2 LINE L1 300 2807 -3076 9 784 903 127 0 0 chrX 26114792 26114926 -140535370 + B1_Mus2 SINE Alu 1 134 -13 9 784 375 41 0 0 chrX 26114936 26114985 -140535311 + (TAA)n Simple_repeat Simple_repeat 2 50 0 1 784 17307 161 19 36 chrX 26114985 26116944 -140533352 + L1VL2 LINE L1 2809 4755 -1128 9 784 5189 145 19 1 chrX 26116945 26117796 -140532500 + Lx LINE L1 5787 6652 -2 1 784 21 0 0 0 chrX 26117796 26117817 -140532479 + AT_rich Low_complexity Low_complexity 1 21 0 1 784 25 90 0 0 chrX 26117860 26117927 -140532369 + AT_rich Low_complexity Low_complexity 1 67 0 1 784 645 14 0 0 chrX 26119094 26119168 -140531128 + (TC)n Simple_repeat Simple_repeat 2 75 0 1 784 269 269 95 69 chrX 26119512 26119628 -140530668 + B1F SINE Alu 29 147 -2 1 784 242 283 101 28 chrX 26119643 26119752 -140530544 + B1F SINE Alu 1 117 -32 1 784 769 299 39 24 chrX 26120534 26120740 -140529556 - B3 SINE B2 -6 210 2 1 784 931 126 14 0 chrX 26120996 26121139 -140529157 - B1_Mus1 SINE Alu 0 148 4 1 784 358 265 170 0 chrX 26121150 26121338 -140528958 - B4 SINE B4 -70 222 3 1 784 225 0 0 0 chrX 26121593 26121618 -140528678 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1 784 21 36 0 0 chrX 26121982 26122010 -140528286 + AT_rich Low_complexity Low_complexity 1 28 0 1 784 321 322 49 8 chrX 26122258 26122380 -140527916 - B1F SINE Alu -3 146 20 1 784 25312 146 6 2 chrX 26122630 26127798 -140522498 + L1_Mus3 LINE L1 1445 6634 -4 1 784 208 147 0 0 chrX 26128229 26128263 -140522033 + (A)n Simple_repeat Simple_repeat 1 34 0 1 784 195 129 0 0 chrX 26128445 26128476 -140521820 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 784 261 0 0 0 chrX 26128478 26128507 -140521789 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 784 264 350 20 10 chrX 26129097 26129198 -140521098 + PB1D10 SINE Alu 1 102 -15 1 784 235 352 22 11 chrX 26130102 26130191 -140520105 - B3 SINE B2 -14 202 113 1 784 470 298 65 13 chrX 26130276 26130429 -140519867 - B3 SINE B2 -53 163 3 1 784 387 0 0 0 chrX 26130513 26130556 -140519740 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 784 6860 109 24 10 chrX 26130676 26132455 -140517841 - L1_Mus1 LINE L1 0 6567 4778 1 784 7315 79 7 10 chrX 26132436 26133614 -140516682 - L1Md_F2 LINE L1 0 6582 5405 1 784 17629 158 11 16 chrX 26133612 26136946 -140513350 - L1_Mus1 LINE L1 -1075 4808 1492 1 784 6576 161 27 18 chrX 26136944 26138288 -140512008 - L1_Mus3 LINE L1 -690 5948 4601 1 784 601 207 9 0 chrX 26138287 26138398 -140511898 - Lx4A LINE L1 -228 6830 6719 1 784 2131 259 69 13 chrX 26139257 26139868 -140510428 - Lx2B LINE L1 -14 6986 6342 1 784 3060 159 65 15 chrX 26139865 26140025 -140510271 + Lx4A LINE L1 4537 4730 -1147 1 784 297 0 0 0 chrX 26140025 26140058 -140510238 + (TAA)n Simple_repeat Simple_repeat 1 33 0 1 784 3060 159 65 15 chrX 26140058 26140508 -140509788 + Lx4A LINE L1 4731 5178 -699 1 784 448 176 0 36 chrX 26140681 26140793 -140509503 - URR1B DNA MER1_type 0 225 118 1 784 345 284 71 47 chrX 26141121 26141291 -140509005 + RLTR1B LTR ERV1 166 339 -173 1 784 8386 32 1 0 chrX 26141466 26142739 -140507557 - L1Md_A LINE L1 0 6582 5309 1 784 7739 40 0 0 chrX 26142762 26143690 -140506606 + L1Md_T LINE L1 5655 6582 0 1 784 5582 192 23 10 chrX 26143702 26145265 -140505031 + Lx4A LINE L1 5190 6779 -279 1 784 348 409 25 25 chrX 26145633 26146084 -140504212 - RMER1C Other Other -536 806 393 1 784 499 423 12 0 chrX 26146245 26146498 -140503798 - RMER1C Other Other -523 819 564 1 784 24 0 0 0 chrX 26146647 26146671 -140503625 + AT_rich Low_complexity Low_complexity 1 24 0 1 784 405 401 26 19 chrX 26146775 26147039 -140503257 - RMER1C Other Other -613 729 464 1 784 300 442 8 12 chrX 26147246 26147500 -140502796 - RMER1C Other Other -581 761 509 1 784 486 0 0 0 chrX 26147931 26147985 -140502311 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 784 370 416 30 47 chrX 26148194 26148555 -140501741 - RMER1C Other Other -610 732 378 1 784 286 398 47 10 chrX 26149177 26149370 -140500926 - RMER1C Other Other -681 661 462 1 784 313 398 55 5 chrX 26149499 26149701 -140500595 - RMER1C Other Other -645 697 486 1 784 345 413 41 32 chrX 26149806 26150149 -140500147 - RMER1C Other Other -584 758 413 1 784 251 411 35 22 chrX 26150527 26150758 -140499538 - RMER1C Other Other -605 737 504 1 784 622 375 43 20 chrX 26150986 26151332 -140498964 - RMER1C Other Other -468 874 521 1 784 227 390 0 0 chrX 26151584 26151684 -140498612 - RMER1C Other Other -571 771 672 1 784 390 425 22 17 chrX 26151822 26152183 -140498113 - RMER1C Other Other -493 849 487 1 784 235 417 35 10 chrX 26152258 26152459 -140497837 - RMER1C Other Other -511 831 471 1 784 263 426 17 38 chrX 26152857 26153201 -140497095 - RMER1C Other Other -625 717 381 1 784 4088 201 25 6 chrX 26153926 26154769 -140495527 + L1Md_A LINE L1 233 1091 -5633 1 784 21158 72 150 2 chrX 26154767 26157908 -140492388 + L1Md_A LINE L1 1977 5586 -297 1 784 7834 57 2 0 chrX 26157908 26158890 -140491406 + L1Md_F2 LINE L1 5587 6570 -12 1 784 2165 97 0 155 chrX 26158891 26159342 -140490954 + L1Md_A LINE L1 964 1344 -5380 1 784 2081 65 0 0 chrX 26159352 26159644 -140490652 + L1Md_A LINE L1 1468 1759 -4124 1 784 799 127 7 14 chrX 26159648 26159792 -140490504 - L1Md_F2 LINE L1 -12 6570 6428 1 784 274 322 57 64 chrX 26160074 26160356 -140489940 - RMER17C LTR ERVK -48 362 83 1 784 5773 124 16 34 chrX 26160803 26161785 -140488511 + Lx3A LINE L1 6011 6975 -6 1 784 215 346 43 35 chrX 26163125 26163266 -140487030 + L2 LINE L2 1518 1659 -1760 1 784 197 337 52 10 chrX 26163629 26163725 -140486571 + L2 LINE L2 1926 2025 -1394 1 784 562 326 40 15 chrX 26163740 26163947 -140486349 - B4A SINE B4 -2 290 83 1 784 396 327 111 34 chrX 26164112 26164346 -140485950 + L2 LINE L2 2049 2300 -1119 1 784 4585 136 12 19 chrX 26164351 26165148 -140485148 + YREP_Mm Unknown Unknown 986 1777 -35 1 784 432 289 26 0 chrX 26165991 26166105 -140484191 + B3 SINE B2 98 214 -2 1 784 330 277 75 8 chrX 26166161 26166281 -140484015 + B1F SINE Alu 21 148 -1 1 784 946 237 19 0 chrX 26166427 26166634 -140483662 + B3 SINE B2 1 211 -5 1 784 667 327 86 22 chrX 26166866 26167135 -140483161 + B4A SINE B4 4 289 -3 1 784 16178 177 33 49 chrX 26167265 26169951 -140480345 + L1VL2 LINE L1 300 2807 -3076 1 784 987 112 0 0 chrX 26169951 26170085 -140480211 + B1_Mus2 SINE Alu 1 134 -13 1 784 489 47 0 0 chrX 26170095 26170159 -140480137 + (TAA)n Simple_repeat Simple_repeat 2 65 0 1 784 16178 161 19 36 chrX 26170159 26172120 -140478176 + L1VL2 LINE L1 2809 4755 -1128 1 784 5131 147 19 1 chrX 26172121 26172972 -140477324 + Lx LINE L1 5787 6652 -2 1 784 21 0 0 0 chrX 26172972 26172993 -140477303 + AT_rich Low_complexity Low_complexity 1 21 0 1 784 21 82 0 0 chrX 26173061 26173110 -140477186 + AT_rich Low_complexity Low_complexity 1 49 0 1 784 25 65 0 0 chrX 26173970 26174016 -140476280 + AT_rich Low_complexity Low_complexity 1 46 0 1 784 630 0 0 0 chrX 26174244 26174314 -140475982 + (TC)n Simple_repeat Simple_repeat 2 71 0 1 784 342 0 0 0 chrX 26174315 26174353 -140475943 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 784 24 0 0 0 chrX 26174631 26174655 -140475641 + AT_rich Low_complexity Low_complexity 1 24 0 1 784 260 286 134 60 chrX 26174655 26174789 -140475507 + B1F SINE Alu 4 147 -2 1 784 217 342 47 70 chrX 26174784 26174804 -140475492 + ID_B1 SINE B4 70 195 -29 1 784 270 283 101 28 chrX 26174804 26174913 -140475383 + PB1D10 SINE Alu 1 117 -32 1 784 783 294 39 24 chrX 26175693 26175899 -140474397 - B3 SINE B2 -6 210 2 1 784 921 145 7 0 chrX 26176156 26176301 -140473995 - B1_Mus1 SINE Alu -1 147 2 1 784 560 260 166 15 chrX 26176301 26176500 -140473796 - B4A SINE B4 -63 229 1 1 784 183 42 0 0 chrX 26176756 26176780 -140473516 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 1 784 216 365 0 0 chrX 26177076 26177128 -140473168 + ID4 SINE ID 4 55 -28 1 784 21 36 0 0 chrX 26177141 26177169 -140473127 + AT_rich Low_complexity Low_complexity 1 28 0 1 784 309 331 49 8 chrX 26177417 26177539 -140472757 - B1F SINE Alu -3 146 20 1 784 24019 147 6 1 chrX 26177790 26182958 -140467338 + L1_Mus3 LINE L1 1445 6634 -4 1 784 255 61 0 0 chrX 26183378 26183411 -140466885 + (A)n Simple_repeat Simple_repeat 1 33 0 1 784 301 235 9 75 chrX 26183523 26183629 -140466667 - HAL1-3A_ME LINE L1 -784 2074 1976 1 784 195 121 0 0 chrX 26183630 26183649 -140466647 + (TA)n Simple_repeat Simple_repeat 2 20 0 1 784 186 43 0 0 chrX 26183649 26183672 -140466624 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 784 195 121 0 0 chrX 26183672 26183685 -140466611 + (TA)n Simple_repeat Simple_repeat 1 13 0 1 784 285 281 24 35 chrX 26184253 26184338 -140465958 + B4A SINE B4 82 165 -127 1 784 246 352 22 11 chrX 26185265 26185354 -140464942 - B3 SINE B2 -14 202 113 1 784 217 299 0 69 chrX 26185358 26185430 -140464866 - B4A SINE B4 -139 153 87 1 784 451 305 65 13 chrX 26185439 26185592 -140464704 - B3 SINE B2 -53 163 3 1 784 459 0 0 0 chrX 26185678 26185729 -140464567 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 784 6796 108 38 2 chrX 26185849 26187583 -140462713 - L1_Mus1 LINE L1 0 6567 4771 1 784 7021 75 4 12 chrX 26187560 26188744 -140461552 - L1Md_F2 LINE L1 -1 6581 5405 1 784 17070 154 11 10 chrX 26188742 26192054 -140458242 - L1_Mus1 LINE L1 -1075 4808 1492 1 784 6140 160 26 12 chrX 26192052 26193381 -140456915 - L1_Mus3 LINE L1 -690 5948 4601 1 784 615 180 9 0 chrX 26193380 26193491 -140456805 - Lx4A LINE L1 -228 6830 6719 1 784 1948 260 66 23 chrX 26194353 26194971 -140455325 - Lx2B LINE L1 -14 6986 6342 1 784 2851 161 67 15 chrX 26194968 26195129 -140455167 + L1_Mur2 LINE L1 4537 4730 -1147 1 784 357 24 0 0 chrX 26195129 26195171 -140455125 + (TAA)n Simple_repeat Simple_repeat 1 42 0 1 784 2851 161 67 15 chrX 26195171 26195619 -140454677 + L1_Mur2 LINE L1 4731 5178 -699 1 784 410 182 22 11 chrX 26195792 26195881 -140454415 - URR1B DNA MER1_type 0 225 136 1 784 24 32 0 0 chrX 26195985 26196016 -140454280 + AT_rich Low_complexity Low_complexity 1 31 0 1 784 2787 243 21 11 chrX 26196156 26197147 -140453149 - Lx6 LINE L1 -1352 6108 5105 2 784 1130 220 37 9 chrX 26197152 26197478 -140452818 - Lx6 LINE L1 -2035 3845 3511 2 784 620 271 9 40 chrX 26197478 26197654 -140452642 - Lx6 LINE L1 -3397 2480 2311 2 784 342 0 0 0 chrX 26197654 26197692 -140452604 + (TC)n Simple_repeat Simple_repeat 2 39 0 2 784 620 271 9 40 chrX 26197692 26197738 -140452558 - Lx6 LINE L1 -3567 2310 2265 2 784 641 318 50 18 chrX 26197744 26197962 -140452334 - ORR1D2 LTR MaLR -145 225 1 2 784 372 397 4 0 chrX 26197964 26198198 -140452098 + Lx8 LINE L1 6956 7190 -283 2 784 1000 278 47 22 chrX 26198299 26198659 -140451637 + ORR1D2 LTR MaLR 1 369 -1 2 784 479 248 8 8 chrX 26198814 26198936 -140451360 + Lx8 LINE L1 6640 6761 -712 2 784 301 362 0 0 chrX 26199797 26199913 -140450383 + RMER1C Other Other 537 652 -690 2 784 296 46 60 30 chrX 26200676 26200743 -140449553 + (CAAAA)n Simple_repeat Simple_repeat 3 71 0 2 784 240 331 138 19 chrX 26200859 26201019 -140449277 + RMER1C Other Other 488 666 -676 2 784 4819 61 0 0 chrX 26201528 26202180 -140448116 - L1_Mm LINE L1 -3185 2698 2047 2 784 1875 131 254 31 chrX 26202180 26202628 -140447668 - RLTR6_Mm LTR ERV1 -70 584 37 2 784 229 227 194 58 chrX 26202634 26202737 -140447559 - RLTR6_Mm LTR ERV1 -537 117 1 2 784 61244 37 13 1 chrX 26202737 26210417 -140439879 - RLTR6-int LTR ERV1 0 7778 1 2 784 1965 128 244 32 chrX 26210418 26210886 -140439410 - RLTR6_Mm LTR ERV1 -51 603 37 2 784 227 228 196 56 chrX 26210888 26210995 -140439301 - RLTR6_Mm LTR ERV1 -532 122 1 2 784 5521 131 8 29 chrX 26210995 26212856 -140437440 - L1Md_A LINE L1 -3833 2050 233 2 785 290 416 29 17 chrX 26214603 26214948 -140435348 + RMER1C Other Other 487 835 -507 2 785 497 390 37 33 chrX 26215451 26216265 -140434031 + RMER1C Other Other 375 889 -453 2 785 540 0 0 0 chrX 26216368 26216428 -140433868 + (TA)n Simple_repeat Simple_repeat 1 60 0 2 785 248 409 44 35 chrX 26216687 26217006 -140433290 + RMER1C Other Other 437 758 -584 2 785 225 406 0 0 chrX 26217101 26217229 -140433067 + RMER1C Other Other 631 758 -584 2 785 292 377 47 10 chrX 26217435 26217628 -140432668 + RMER1C Other Other 462 661 -681 2 785 238 434 29 32 chrX 26218446 26218791 -140431505 + RMER1C Other Other 494 837 -505 2 785 243 420 12 16 chrX 26219259 26219501 -140430795 + RMER1C Other Other 398 638 -704 2 785 251 405 26 22 chrX 26219720 26219947 -140430349 + RMER1C Other Other 464 691 -651 2 785 274 436 16 4 chrX 26220263 26220507 -140429789 + RMER1C Other Other 499 745 -597 2 785 272 373 24 27 chrX 26220707 26221139 -140429157 + RMER1C Other Other 466 865 -477 2 785 10019 184 30 8 chrX 26221485 26224466 -140425830 - Lx4A LINE L1 -279 6779 3725 2 785 6096 185 38 6 chrX 26224478 26226043 -140424253 + Lx3C LINE L1 5353 6964 -12 2 785 980 182 11 0 chrX 26226053 26226240 -140424056 - Lx2 LINE L1 -39 6958 6770 2 785 4220 169 21 4 chrX 26226237 26227045 -140423251 - Lx2 LINE L1 -354 6643 5822 2 785 4577 94 5 5 chrX 26227057 26227701 -140422595 - L1_Mus1 LINE L1 0 6567 5924 2 785 35113 33 4 7 chrX 26227701 26233303 -140416993 + L1Md_A LINE L1 8 5587 -296 2 785 8422 35 0 0 chrX 26233304 26234298 -140415998 + L1Md_A LINE L1 5589 6582 0 2 785 24879 136 6 73 chrX 26234312 26239929 -140410367 - L1_Mus1 LINE L1 -630 5937 725 2 785 547 216 37 0 chrX 26239938 26240072 -140410224 - L1_Mus1 LINE L1 -5814 802 664 2 785 569 279 25 100 chrX 26240096 26240586 -140409710 - L1VL1 LINE L1 -5941 477 45 2 785 819 171 64 15 chrX 26240612 26240814 -140409482 - L1_Mm LINE L1 -437 5446 5235 2 785 877 293 82 0 chrX 26240990 26241270 -140409026 + MER2 DNA MER2_type 19 321 -24 2 785 745 302 10 0 chrX 26241680 26241885 -140408411 + B3 SINE B2 1 207 -9 2 785 816 39 0 0 chrX 26241967 26242071 -140408225 + (TTCC)n Simple_repeat Simple_repeat 3 106 0 2 785 622 261 56 11 chrX 26242161 26242339 -140407957 - B3A SINE B2 -12 186 1 2 785 198 0 0 0 chrX 26242623 26242645 -140407651 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 785 585 256 55 33 chrX 26242652 26242927 -140407369 + Lx7 LINE L1 5857 6137 -1559 2 785 1670 284 47 16 chrX 26242963 26243539 -140406757 + Lx7 LINE L1 6061 6654 -1042 2 785 434 159 0 0 chrX 26243803 26243891 -140406405 + RMER3D-int LTR ERVK 489 564 -2278 2 785 598 215 25 39 chrX 26243906 26244109 -140406187 + RMER3D-int LTR ERVK 652 851 -1991 2 785 511 229 32 37 chrX 26244193 26244528 -140405768 + RMER3D-int LTR ERVK 354 804 -2038 2 785 443 137 80 27 chrX 26244530 26244680 -140405616 + GA-rich Low_complexity Low_complexity 3 160 0 2 785 1985 207 92 78 chrX 26244726 26245044 -140405252 + RMER3D-int LTR ERVK 1016 1383 -1459 2 785 3165 58 2 0 chrX 26245044 26245439 -140404857 - MTA_Mm LTR MaLR 0 396 1 2 785 1985 207 92 78 chrX 26245439 26245774 -140404522 + RMER3D-int LTR ERVK 1384 1678 -1164 2 785 2687 196 117 14 chrX 26245796 26246720 -140403576 + MYSERV16_I-int LTR ERVK 1308 2326 0 2 785 2722 95 22 2 chrX 26246720 26247130 -140403166 + BGLII LTR ERVK 4 421 0 2 785 1186 212 74 68 chrX 26247369 26247801 -140402495 - RLTR21 LTR ERVK -150 1254 713 2 785 10930 95 7 1 chrX 26247802 26250133 -140400163 - L1Md_F2 LINE L1 0 6582 4237 2 785 11594 118 32 19 chrX 26250129 26252831 -140397465 - L1Md_F2 LINE L1 -2718 3165 446 2 785 824 148 11 56 chrX 26252834 26253013 -140397283 - RLTR21 LTR ERVK -855 717 547 2 785 1450 233 18 39 chrX 26253059 26253390 -140396906 - RLTR21 LTR ERVK -1248 324 1 2 785 280 271 0 65 chrX 26253752 26253890 -140396406 - Lx6 LINE L1 0 7460 7332 2 785 1103 278 22 32 chrX 26253890 26254124 -140396172 - Lx6 LINE L1 -1326 6134 5904 2 785 2077 193 17 14 chrX 26254124 26254544 -140395752 - MTC LTR MaLR 0 421 1 2 785 1103 278 22 32 chrX 26254544 26254770 -140395526 - Lx6 LINE L1 -1557 5903 5679 2 785 1053 196 28 3 chrX 26254795 26255077 -140395219 - L1_Mur3 LINE L1 -2593 3287 2999 2 785 3540 150 23 24 chrX 26255078 26255608 -140394688 - L1_Mus3 LINE L1 -7 6631 6101 2 785 2458 65 62 3 chrX 26255608 26255931 -140394365 - ORR1A1 LTR MaLR -4 342 1 2 785 3540 150 23 24 chrX 26255931 26256055 -140394241 - L1_Mus3 LINE L1 -538 6100 5978 2 785 2393 51 3 13 chrX 26256055 26256371 -140393925 + L1Md_F2 LINE L1 5273 5585 -298 2 785 7168 77 8 13 chrX 26256372 26257371 -140392925 + L1Md_F2 LINE L1 5587 6580 -2 2 785 251 158 34 34 chrX 26258698 26258757 -140391539 + GA-rich Low_complexity Low_complexity 2 60 0 2 785 332 241 40 60 chrX 26258915 26259065 -140391231 - L1_Rod LINE L1 -305 5542 5396 2 785 2200 205 74 38 chrX 26259084 26259638 -140390658 + RLTR31A_Mm LTR ERVK 11 584 0 2 785 249 208 117 19 chrX 26259638 26259741 -140390555 - L1_Rod LINE L1 -475 5372 5260 2 785 827 142 7 50 chrX 26259883 26260024 -140390272 - B1_Mus1 SINE Alu 0 148 14 2 785 2964 333 31 37 chrX 26260478 26260770 -140389526 - RodERV21-int LTR ERV1 -198 4793 4501 2 785 2426 120 50 59 chrX 26260770 26261194 -140389102 - RLTR9B2 LTR ERVK 0 420 1 2 785 2964 333 31 37 chrX 26261194 26262802 -140387494 - RodERV21-int LTR ERV1 -491 4500 2905 2 785 1021 277 0 7 chrX 26263382 26263684 -140386612 - MuRRS4-int LTR ERV1 -128 4935 4636 2 785 753 197 0 6 chrX 26263675 26263833 -140386463 - MuRRS4-int LTR ERV1 -119 4944 4788 2 785 1683 137 170 27 chrX 26263956 26264445 -140385851 - MuRRS4-int LTR ERV1 -2872 2191 1633 2 785 1432 265 38 5 chrX 26264465 26264886 -140385410 - MuRRS4-int LTR ERV1 -3617 1446 1012 2 785 745 270 16 44 chrX 26265034 26265282 -140385014 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 2 785 552 130 111 17 chrX 26265282 26265399 -140384897 - MuRRS4-int LTR ERV1 -4186 877 750 2 785 386 196 10 71 chrX 26265385 26265484 -140384812 - RMER16-int LTR ERVK -3960 1446 1354 2 785 3936 136 20 5 chrX 26265607 26266266 -140384030 - RMER16-int LTR ERVK -4067 1339 671 2 785 1085 244 65 22 chrX 26266289 26266611 -140383685 - MuRRS4-int LTR ERV1 -4388 675 340 2 785 491 258 55 81 chrX 26266952 26267502 -140382794 - MuRRS4-int LTR ERV1 -4565 498 5 2 785 675 276 69 40 chrX 26267504 26267780 -140382516 - LTRIS4 LTR ERV1 0 507 224 2 785 249 57 0 0 chrX 26268382 26268417 -140381879 + (A)n Simple_repeat Simple_repeat 1 35 0 2 785 367 314 24 62 chrX 26268552 26268888 -140381408 - RodERV21-int LTR ERV1 -3026 4065 3743 2 785 1107 296 14 49 chrX 26269174 26269604 -140380692 - RodERV21-int LTR ERV1 -2273 2718 2304 2 785 4329 102 24 0 chrX 26269609 26270273 -140380023 - L1_Mus3 LINE L1 -247 6391 5712 2 785 1391 153 0 0 chrX 26270275 26270503 -140379793 + L1_Mus3 LINE L1 5473 5700 -183 2 785 1744 172 9 21 chrX 26270504 26270830 -140379466 - RLTR14 LTR ERV1 -54 328 7 2 785 503 172 0 11 chrX 26270855 26270949 -140379347 - RLTR14-int LTR ERV1 -5 5312 5220 2 785 1380 187 118 6 chrX 26270972 26271327 -140378969 - RLTR14-int LTR ERV1 -205 5112 4718 2 785 1593 131 26 93 chrX 26271329 26271674 -140378622 - RLTRETN_Mm LTR ERVK 0 322 1 2 785 9604 162 58 51 chrX 26271674 26275063 -140375233 - MMETn-int LTR ERVK 0 4844 1 2 785 236 271 64 27 chrX 26275063 26275173 -140375123 - RLTRETN_Mm LTR ERVK 0 322 209 2 785 24617 83 1 17 chrX 26275173 26280095 -140370201 - L1Md_F LINE L1 -525 5358 519 2 785 6563 93 1 6 chrX 26280096 26281032 -140369264 - L1Md_F LINE L1 -5494 1025 95 2 785 658 258 26 142 chrX 26281096 26281189 -140369107 + RLTR45-int LTR ERVK 5040 5120 -2124 2 785 4807 62 3 3 chrX 26281189 26281805 -140368491 + L1Md_F2 LINE L1 5966 6581 -1 2 785 658 258 26 142 chrX 26281805 26281835 -140368461 + RLTR45-int LTR ERVK 5121 5146 -2098 2 785 190 0 67 0 chrX 26281835 26281865 -140368431 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 785 2853 184 15 40 chrX 26281865 26282780 -140367516 + MMETn-int LTR ERVK 2541 3719 -1125 2 785 713 203 0 0 chrX 26282775 26282898 -140367398 + MMETn-int LTR ERVK 6539 6661 -745 2 785 3157 201 51 18 chrX 26282929 26283669 -140366627 - RLTR14-int LTR ERV1 -2117 3200 2436 2 785 1725 225 59 77 chrX 26285124 26285414 -140364882 + RLTR40 LTR ERVK 22 308 -509 2 785 1221 41 0 0 chrX 26285414 26285561 -140364735 + B1_Mm SINE Alu 1 147 0 2 785 1725 225 59 77 chrX 26285561 26285815 -140364481 + RLTR40 LTR ERVK 309 556 -261 2 785 362 169 11 0 chrX 26285817 26285906 -140364390 + GA-rich Low_complexity Low_complexity 2 91 0 2 785 610 289 52 44 chrX 26285906 26286093 -140364203 + RLTR40 LTR ERVK 566 752 -65 2 785 6132 92 35 3 chrX 26286093 26286509 -140363787 - RLTR13B1 LTR ERVK 0 893 468 2 785 342 0 0 0 chrX 26286509 26286547 -140363749 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 785 6132 92 35 3 chrX 26286547 26286996 -140363300 - RLTR13B1 LTR ERVK -426 467 1 2 785 610 289 52 44 chrX 26286996 26287058 -140363238 + RLTR40 LTR ERVK 753 817 0 2 785 369 0 0 0 chrX 26287249 26287290 -140363006 + (TAA)n Simple_repeat Simple_repeat 2 42 0 2 785 630 239 68 11 chrX 26288822 26289012 -140361284 - Lx9 LINE L1 -243 7401 7201 2 785 329 226 0 0 chrX 26289012 26289096 -140361200 + Lx9 LINE L1 7554 7637 -7 2 785 494 269 20 7 chrX 26289105 26289255 -140361041 + Lx5 LINE L1 6825 6976 -74 2 785 389 36 0 18 chrX 26289263 26289319 -140360977 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 2 785 592 232 36 14 chrX 26289334 26289474 -140360822 + B1_Mur2 SINE Alu 1 143 -6 2 785 1894 157 27 0 chrX 26289508 26289846 -140360450 + L1_Mus3 LINE L1 6284 6630 -8 2 785 29 47 0 0 chrX 26289859 26289902 -140360394 + AT_rich Low_complexity Low_complexity 1 43 0 2 785 185 194 0 61 chrX 26289968 26290034 -140360262 + A-rich Low_complexity Low_complexity 4 65 0 2 785 719 265 19 14 chrX 26290043 26290257 -140360039 + Lx4B LINE L1 6809 7023 -35 2 785 2739 178 32 2 chrX 26290293 26290885 -140359411 - L1_Mur2 LINE L1 -1176 4701 4092 2 785 9983 143 39 24 chrX 26290885 26292257 -140358039 - RLTR22_Mur LTR ERVK 0 1848 461 2 785 424 89 0 25 chrX 26292257 26292338 -140357958 + (TAG)n Simple_repeat Simple_repeat 3 81 0 2 785 9983 143 39 24 chrX 26292338 26292785 -140357511 - RLTR22_Mur LTR ERVK -1388 460 3 2 785 718 174 225 0 chrX 26292785 26293021 -140357275 - L1_Mur2 LINE L1 -1782 4095 3807 2 785 1409 129 25 4 chrX 26293065 26293306 -140356990 + L1_Mus4 LINE L1 6391 6636 0 2 785 192 40 0 0 chrX 26293795 26293820 -140356476 + (CAAAG)n Simple_repeat Simple_repeat 3 27 0 2 785 24 0 0 0 chrX 26295213 26295237 -140355059 + AT_rich Low_complexity Low_complexity 1 24 0 2 785 327 276 22 7 chrX 26295522 26295657 -140354639 + L1_Mur2 LINE L1 4334 4470 -1407 2 785 830 324 41 26 chrX 26295662 26296097 -140354199 + Lx6 LINE L1 6506 7296 -164 2 785 1504 184 20 90 chrX 26296074 26296528 -140353768 - L1_Mur2 LINE L1 -2136 3741 3320 2 785 1200 70 0 0 chrX 26296530 26296688 -140353608 - L1_Mus1 LINE L1 0 6567 6410 2 785 20395 130 6 3 chrX 26296688 26299684 -140350612 - L1_Mus1 LINE L1 -431 6136 3134 2 785 186 43 0 0 chrX 26299684 26299707 -140350589 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 785 20395 140 7 3 chrX 26299707 26300540 -140349756 - L1_Mus1 LINE L1 -2750 3133 2295 2 785 1331 179 52 0 chrX 26300541 26300792 -140349504 + L1VL1 LINE L1 3 266 -6156 3 785 4825 133 29 14 chrX 26300792 26302488 -140347808 + L1Md_F LINE L1 277 1998 -3885 3 785 33990 38 3 8 chrX 26302487 26307687 -140342609 + L1Md_T LINE L1 417 5586 -297 3 785 7591 38 52 8 chrX 26307687 26308121 -140342175 + L1Md_T LINE L1 5587 6032 -550 3 785 3484 23 2 0 chrX 26308121 26308516 -140341780 - MTA_Mm LTR MaLR 0 396 1 3 785 9661 15 2 0 chrX 26308516 26309612 -140340684 - MTA_Mm-int LTR MaLR 0 1098 1 3 785 3484 23 2 0 chrX 26309612 26310007 -140340289 - MTA_Mm LTR MaLR 0 396 1 3 785 7591 38 52 8 chrX 26310007 26310523 -140339773 + L1Md_T LINE L1 6033 6579 -3 3 785 1372 126 0 0 chrX 26310524 26310755 -140339541 + L1_Mm LINE L1 1987 2217 -3666 3 785 495 222 16 8 chrX 26310764 26310891 -140339405 + L1_Mus1 LINE L1 675 802 -5814 3 785 23845 136 13 66 chrX 26310900 26317102 -140333194 + L1_Mus1 LINE L1 725 6567 0 3 785 4283 183 43 5 chrX 26317116 26318135 -140332161 + Lx2 LINE L1 5823 6983 -17 3 785 404 226 39 19 chrX 26318434 26318538 -140331758 - ID_B1 SINE B4 -2 222 117 3 785 5672 192 38 8 chrX 26318538 26320060 -140330236 - Lx3C LINE L1 -57 6919 5353 3 785 9932 182 30 18 chrX 26320072 26323083 -140327213 + Lx4A LINE L1 3725 6779 -279 3 785 277 382 27 23 chrX 26323449 26323861 -140326435 - RMER1C Other Other -477 865 437 3 785 353 427 12 0 chrX 26324059 26324307 -140325989 - RMER1C Other Other -671 671 421 3 785 240 402 38 30 chrX 26324583 26324847 -140325449 - RMER1C Other Other -613 729 464 3 785 275 429 9 18 chrX 26324945 26325313 -140324983 - RMER1C Other Other -589 753 392 3 785 262 411 17 11 chrX 26325969 26326146 -140324150 - RMER1C Other Other -691 651 474 3 785 259 392 33 13 chrX 26326955 26327150 -140323146 - RMER1C Other Other -581 761 419 3 785 350 428 23 21 chrX 26327267 26327802 -140322494 - RMER1C Other Other -509 833 378 3 785 405 0 0 0 chrX 26328166 26328211 -140322085 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 785 984 18 0 0 chrX 26328211 26328324 -140321972 + (TA)n Simple_repeat Simple_repeat 2 115 0 3 785 525 395 34 24 chrX 26328436 26329238 -140321058 - RMER1C Other Other -460 882 375 3 785 265 399 16 5 chrX 26329753 26329947 -140320349 - RMER1C Other Other -777 565 370 3 785 213 39 0 0 chrX 26330677 26330703 -140319593 + (T)n Simple_repeat Simple_repeat 1 26 0 3 785 3384 169 8 3 chrX 26331836 26332484 -140317812 + L1Md_A LINE L1 441 1091 -5633 3 785 2413 117 0 2 chrX 26332482 26332877 -140317419 + L1Md_A LINE L1 1977 2370 -3513 3 785 20329 76 1 1 chrX 26332888 26335624 -140314672 + L1Md_A LINE L1 2850 5586 -297 3 785 7764 60 1 2 chrX 26335624 26336609 -140313687 + L1Md_F2 LINE L1 5587 6570 -12 3 785 4012 72 2 0 chrX 26336610 26337446 -140312850 + L1Md_Gf LINE L1 828 1762 -4124 3 785 777 121 42 21 chrX 26337450 26337594 -140312702 - L1_Mus1 LINE L1 0 6567 6421 3 785 294 317 53 67 chrX 26337873 26338157 -140312139 - RMER17C LTR ERVK -48 362 83 3 785 5659 129 11 30 chrX 26338621 26339586 -140310710 + Lx3A LINE L1 6028 6974 -7 3 785 186 321 26 35 chrX 26340950 26341063 -140309233 + L2 LINE L2 1548 1659 -1760 3 785 181 347 52 10 chrX 26341426 26341522 -140308774 + L2 LINE L2 1926 2025 -1394 3 785 543 333 40 15 chrX 26341536 26341743 -140308553 - B4A SINE B4 -2 290 83 3 785 228 86 0 0 chrX 26341789 26341824 -140308472 + (TGG)n Simple_repeat Simple_repeat 1 35 0 3 785 242 377 103 21 chrX 26341920 26342153 -140308143 + L2 LINE L2 2049 2300 -1119 3 785 4614 132 12 19 chrX 26342158 26342955 -140307341 + YREP_Mm Unknown Unknown 986 1777 -35 3 785 476 279 0 0 chrX 26343800 26343904 -140306392 + B3 SINE B2 98 201 -15 3 785 369 269 60 9 chrX 26343964 26344080 -140306216 + B1F SINE Alu 21 142 -7 3 785 987 222 19 0 chrX 26344230 26344437 -140305859 + B3 SINE B2 1 211 -5 3 785 626 323 97 34 chrX 26344670 26344939 -140305357 + B4A SINE B4 4 289 -3 3 98 17404 177 32 49 chrX 26345069 26347756 -140302540 + L1VL2 LINE L1 300 2807 -3076 3 786 925 119 0 0 chrX 26347756 26347890 -140302406 + B1_Mus2 SINE Alu 1 134 -13 3 786 423 52 0 0 chrX 26347900 26347958 -140302338 + (TAA)n Simple_repeat Simple_repeat 2 59 0 3 786 17404 161 18 35 chrX 26347958 26349919 -140300377 + L1VL2 LINE L1 2809 4755 -1128 3 786 5041 141 41 1 chrX 26349920 26350753 -140299543 + Lx LINE L1 5787 6652 -2 3 786 21 0 0 0 chrX 26350753 26350774 -140299522 + AT_rich Low_complexity Low_complexity 1 21 0 3 786 26 88 0 0 chrX 26350817 26350885 -140299411 + AT_rich Low_complexity Low_complexity 1 68 0 3 786 501 17 0 0 chrX 26352052 26352110 -140298186 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 786 513 44 0 0 chrX 26352111 26352179 -140298117 + (CA)n Simple_repeat Simple_repeat 2 69 0 3 786 269 269 95 69 chrX 26352499 26352615 -140297681 + B1F SINE Alu 29 147 -2 3 786 216 342 47 70 chrX 26352610 26352630 -140297666 + ID_B1 SINE B4 70 195 -29 3 786 248 292 101 28 chrX 26352630 26352739 -140297557 + B1F SINE Alu 1 117 -32 3 786 659 294 39 24 chrX 26353522 26353728 -140296568 - B3 SINE B2 -6 210 2 3 786 921 127 14 0 chrX 26353984 26354126 -140296170 - B1_Mus1 SINE Alu -1 147 4 3 786 373 256 160 10 chrX 26354127 26354327 -140295969 - B4 SINE B4 -62 230 1 3 786 225 0 0 0 chrX 26354581 26354606 -140295690 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 3 786 21 36 0 0 chrX 26354970 26354998 -140295298 + AT_rich Low_complexity Low_complexity 1 28 0 3 786 304 331 49 8 chrX 26355246 26355368 -140294928 - B1F SINE Alu -3 146 20 3 786 25113 148 6 2 chrX 26355618 26360786 -140289510 + L1_Mus3 LINE L1 1445 6634 -4 3 786 208 147 0 0 chrX 26361217 26361251 -140289045 + (A)n Simple_repeat Simple_repeat 1 34 0 3 786 438 256 0 0 chrX 26361429 26361550 -140288746 + (TA)n Simple_repeat Simple_repeat 2 122 0 3 786 264 350 20 10 chrX 26362125 26362226 -140288070 + PB1D10 SINE Alu 1 102 -15 3 786 235 352 22 11 chrX 26363130 26363219 -140287077 - B3 SINE B2 -14 202 113 3 786 234 269 0 69 chrX 26363223 26363295 -140287001 - B4A SINE B4 -139 153 87 3 786 445 311 65 13 chrX 26363304 26363457 -140286839 - B3 SINE B2 -53 163 3 3 786 387 0 0 0 chrX 26363541 26363584 -140286712 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 786 6790 108 25 9 chrX 26363704 26365479 -140284817 - L1_Mus1 LINE L1 0 6567 4778 3 786 7387 75 7 10 chrX 26365460 26366638 -140283658 - L1Md_F2 LINE L1 0 6582 5405 3 786 17604 158 11 17 chrX 26366636 26369974 -140280322 - L1_Mus1 LINE L1 -1075 4808 1492 3 786 6598 158 27 16 chrX 26369972 26371310 -140278986 - L1_Mus3 LINE L1 -690 5948 4601 3 786 637 189 9 0 chrX 26371309 26371420 -140278876 - Lx4A LINE L1 -228 6830 6719 3 786 2157 260 67 13 chrX 26372279 26372891 -140277405 - Lx2B LINE L1 -14 6986 6342 3 786 3099 156 65 15 chrX 26372888 26373048 -140277248 + Lx6 LINE L1 4537 4730 -1147 3 786 324 0 0 0 chrX 26373048 26373084 -140277212 + (TAA)n Simple_repeat Simple_repeat 1 36 0 3 786 3099 156 65 15 chrX 26373084 26373534 -140276762 + Lx6 LINE L1 4731 5178 -699 3 786 433 168 9 53 chrX 26373707 26373820 -140276476 - URR1B DNA MER1_type 0 225 118 3 786 389 272 71 47 chrX 26374147 26374317 -140275979 + RLTR1B LTR ERV1 166 339 -173 3 786 8396 33 1 0 chrX 26374484 26375792 -140274504 - L1Md_A LINE L1 -1 6581 5273 3 786 3570 153 20 24 chrX 26375792 26375916 -140274380 + L1_Mus3 LINE L1 5978 6095 -543 3 786 2574 85 0 3 chrX 26375916 26376259 -140274037 + ORR1A1 LTR MaLR 1 342 -4 3 786 3570 153 20 24 chrX 26376259 26376790 -140273506 + L1_Mus3 LINE L1 6096 6630 -8 3 786 1060 203 28 7 chrX 26376791 26377074 -140273222 + L1_Mur3 LINE L1 2999 3287 -2593 3 786 1621 271 21 26 chrX 26377081 26377377 -140272919 + Lx6 LINE L1 5607 5903 -1557 3 786 1984 200 17 17 chrX 26377377 26377798 -140272498 + MTC LTR MaLR 1 421 0 3 786 1621 271 21 26 chrX 26377798 26378032 -140272264 + Lx6 LINE L1 5904 6134 -1326 3 786 244 301 9 17 chrX 26378032 26378147 -140272149 + Lx6 LINE L1 7332 7445 -15 3 786 2661 65 23 6 chrX 26378302 26378656 -140271640 + L1Md_F2 LINE L1 6214 6573 -9 3 786 1277 203 82 47 chrX 26378656 26379081 -140271215 + RLTR21 LTR ERVK 711 1254 -150 3 786 2935 89 7 2 chrX 26379319 26379737 -140270559 - BGLII LTR ERVK 0 421 2 3 786 2965 205 112 9 chrX 26379738 26380662 -140269634 - MYSERV16_I-int LTR ERVK 0 2326 1308 3 786 2252 199 91 82 chrX 26380684 26381019 -140269277 - RMER3D-int LTR ERVK -1164 1678 1386 3 786 3267 46 2 0 chrX 26381019 26381414 -140268882 + MTA_Mm LTR MaLR 1 396 0 3 786 2252 191 88 63 chrX 26381414 26381760 -140268536 - RMER3D-int LTR ERVK -1457 1385 1016 3 786 495 122 82 35 chrX 26381781 26381951 -140268345 + CT-rich Low_complexity Low_complexity 3 180 0 3 786 598 227 73 38 chrX 26381990 26382298 -140267998 - RMER3D-int LTR ERVK -2036 806 354 3 786 689 202 25 40 chrX 26382364 26382565 -140267731 - RMER3D-int LTR ERVK -1993 849 652 3 786 494 128 0 0 chrX 26382580 26382668 -140267628 - RMER3D-int LTR ERVK -2278 564 489 3 786 1962 268 47 19 chrX 26382932 26383510 -140266786 - Lx7 LINE L1 -1042 6654 6061 3 786 669 255 65 44 chrX 26383546 26383821 -140266475 - Lx7 LINE L1 -1559 6137 5857 3 786 646 288 51 6 chrX 26384117 26384295 -140266001 + B3A SINE B2 1 186 -12 3 786 186 43 0 0 chrX 26384387 26384410 -140265886 + (GGAA)n Simple_repeat Simple_repeat 3 25 0 3 786 861 284 0 0 chrX 26384496 26384700 -140265596 - B3 SINE B2 -12 204 1 3 786 986 271 86 0 chrX 26385125 26385416 -140264880 - MER2 DNA MER2_type -29 316 1 3 786 752 187 78 15 chrX 26385580 26385786 -140264510 + L1_Mm LINE L1 5235 5453 -430 3 786 16392 175 12 49 chrX 26385818 26392718 -140257578 + L1_Mus1 LINE L1 217 6567 0 3 786 4282 180 25 4 chrX 26392730 26393534 -140256762 + Lx2 LINE L1 5813 6633 -364 3 786 1224 173 9 0 chrX 26393535 26393760 -140256536 + Lx2 LINE L1 6765 6991 -6 3 786 361 213 0 13 chrX 26394052 26394128 -140256168 - ID_B1 SINE B4 -2 222 148 3 786 603 0 0 0 chrX 26394131 26394198 -140256098 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 786 289 262 56 46 chrX 26394198 26394226 -140256070 - B1F SINE Alu -85 64 39 3 786 6409 186 29 6 chrX 26394226 26395769 -140254527 - Lx3C LINE L1 -40 6936 5353 3 786 7547 220 79 31 chrX 26395776 26395870 -140254426 + Lx4A LINE L1 3729 3819 -2067 3 786 3335 35 2 0 chrX 26395870 26396265 -140254031 + MTA_Mm LTR MaLR 1 396 0 3 786 9087 35 3 1 chrX 26396265 26397361 -140252935 + MTA_Mm-int LTR MaLR 1 1098 0 3 786 3405 23 2 2 chrX 26397361 26397757 -140252539 + MTA_Mm LTR MaLR 1 396 0 3 786 8553 188 34 24 chrX 26397757 26400597 -140249699 + Lx4A LINE L1 3820 6779 -279 3 786 327 391 35 30 chrX 26400963 26401479 -140248817 - RMER1C Other Other -477 865 362 3 786 475 415 12 0 chrX 26401574 26401822 -140248474 - RMER1C Other Other -671 671 421 3 786 419 398 26 19 chrX 26402098 26402362 -140247934 - RMER1C Other Other -613 729 464 3 786 342 431 11 27 chrX 26402457 26402822 -140247474 - RMER1C Other Other -475 867 509 4 786 358 417 34 45 chrX 26403294 26403837 -140246459 - RMER1C Other Other -579 763 378 4 786 338 396 42 5 chrX 26404446 26404639 -140245657 - RMER1C Other Other -681 661 462 4 786 398 434 29 24 chrX 26404769 26405419 -140244877 - RMER1C Other Other -509 833 379 4 786 207 0 0 0 chrX 26405668 26405691 -140244605 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 786 315 0 0 0 chrX 26405691 26405725 -140244571 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 786 694 379 47 26 chrX 26405848 26406666 -140243630 - RMER1C Other Other -468 874 129 4 786 315 428 28 25 chrX 26407178 26407794 -140242502 - RMER1C Other Other -471 871 487 4 786 227 441 12 32 chrX 26408161 26408505 -140241791 - RMER1C Other Other -625 717 381 4 786 3587 163 9 5 chrX 26409230 26409878 -140240418 + L1Md_A LINE L1 444 1094 -5633 4 786 2625 99 2 2 chrX 26409876 26410270 -140240026 + L1Md_A LINE L1 1980 2373 -3513 4 786 20275 77 0 2 chrX 26410281 26413024 -140237272 + L1Md_A LINE L1 2853 5589 -297 4 786 7794 59 1 2 chrX 26413024 26414009 -140236287 + L1Md_F2 LINE L1 5587 6570 -12 4 786 20275 98 14143 0 chrX 26414009 26414324 -140235972 + L1Md_A LINE L1 5590 5597 -289 4 786 4058 63 0 0 chrX 26414290 26414847 -140235449 + L1_Mm LINE L1 1203 1759 -4124 4 786 846 113 35 21 chrX 26414851 26414996 -140235300 - L1_Mus1 LINE L1 0 6567 6421 4 786 226 303 81 66 chrX 26415294 26415552 -140234744 - RMER17C LTR ERVK -64 346 85 4 786 5733 132 7 30 chrX 26416022 26416990 -140233306 + Lx3A LINE L1 6028 6973 -8 4 786 211 333 62 37 chrX 26418309 26418471 -140231825 + L2 LINE L2 1494 1659 -1760 4 786 518 358 37 33 chrX 26418944 26419158 -140231138 - B4A SINE B4 -2 290 76 4 786 228 86 0 0 chrX 26419194 26419229 -140231067 + (TGG)n Simple_repeat Simple_repeat 1 35 0 4 786 363 329 116 34 chrX 26419325 26419558 -140230738 + L2 LINE L2 2049 2300 -1119 4 786 4585 133 12 19 chrX 26419563 26420360 -140229936 + YREP_Mm Unknown Unknown 986 1777 -35 4 786 23 54 0 0 chrX 26420614 26420651 -140229645 + AT_rich Low_complexity Low_complexity 1 37 0 4 786 455 289 0 0 chrX 26421201 26421305 -140228991 + B3 SINE B2 98 201 -15 4 786 397 252 75 8 chrX 26421365 26421485 -140228811 + B1F SINE Alu 21 148 -1 4 786 955 236 19 0 chrX 26421631 26421843 -140228453 + B3 SINE B2 1 216 0 4 786 637 316 95 37 chrX 26422071 26422344 -140227952 + B4A SINE B4 4 292 0 4 786 17086 177 34 52 chrX 26422470 26425176 -140225120 + L1VL2 LINE L1 300 2807 -3076 4 786 990 104 0 0 chrX 26425176 26425310 -140224986 + B1_Mus2 SINE Alu 1 134 -13 4 786 432 104 0 0 chrX 26425320 26425387 -140224909 + (TAA)n Simple_repeat Simple_repeat 2 68 0 4 786 17086 162 21 41 chrX 26425387 26427339 -140222957 + L1VL2 LINE L1 2811 4755 -1128 4 786 5294 140 19 1 chrX 26427340 26428191 -140222105 + Lx LINE L1 5787 6652 -2 4 786 21 89 0 0 chrX 26428255 26428311 -140221985 + AT_rich Low_complexity Low_complexity 1 56 0 4 786 594 0 0 0 chrX 26429670 26429736 -140220560 + (TC)n Simple_repeat Simple_repeat 2 67 0 4 786 237 33 0 0 chrX 26429737 26429767 -140220529 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 786 269 269 95 69 chrX 26430086 26430202 -140220094 + B1F SINE Alu 29 147 -2 4 786 225 333 47 70 chrX 26430197 26430217 -140220079 + ID_B1 SINE B4 70 195 -29 4 786 257 283 101 28 chrX 26430217 26430326 -140219970 + B1F SINE Alu 1 117 -32 4 786 788 289 39 24 chrX 26431109 26431315 -140218981 - B3 SINE B2 -6 210 2 4 786 928 132 0 14 chrX 26431565 26431711 -140218585 - B1_Mus1 SINE Alu -1 147 4 4 786 312 224 26 26 chrX 26431712 26431790 -140218506 - B4A SINE B4 -62 230 153 4 786 333 312 0 0 chrX 26431819 26431912 -140218384 - B4 SINE B4 -199 93 1 4 786 183 42 0 0 chrX 26432168 26432192 -140218104 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 4 786 21 36 0 0 chrX 26432553 26432581 -140217715 + AT_rich Low_complexity Low_complexity 1 28 0 4 786 321 322 49 8 chrX 26432829 26432951 -140217345 - B1F SINE Alu -3 146 20 4 786 25245 149 6 2 chrX 26433202 26438373 -140211923 + L1_Mus3 LINE L1 1445 6634 -4 4 786 27 29 0 0 chrX 26438798 26438832 -140211464 + AT_rich Low_complexity Low_complexity 1 34 0 4 786 419 153 24 0 chrX 26438998 26439072 -140211224 + (TATATG)n Simple_repeat Simple_repeat 6 81 0 4 786 204 40 0 0 chrX 26439072 26439097 -140211199 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 786 419 153 24 0 chrX 26439097 26439107 -140211189 + (TATATG)n Simple_repeat Simple_repeat 2 11 0 4 786 264 279 29 0 chrX 26439679 26439747 -140210549 + PB1D10 SINE Alu 1 70 -47 4 786 256 326 34 0 chrX 26439747 26439776 -140210520 + ID_B1 SINE B4 83 190 -102 4 786 261 341 22 11 chrX 26440687 26440776 -140209520 - B3 SINE B2 -14 202 113 4 786 214 284 0 69 chrX 26440780 26440852 -140209444 - B4A SINE B4 -139 153 87 4 786 436 293 72 20 chrX 26440861 26441014 -140209282 - B3 SINE B2 -53 163 3 4 786 249 57 0 0 chrX 26441098 26441133 -140209163 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 786 6952 106 26 3 chrX 26441253 26443022 -140207274 - L1_Mus1 LINE L1 0 6567 4771 4 786 7447 70 5 12 chrX 26442999 26444180 -140206116 - L1Md_F2 LINE L1 -1 6581 5405 4 786 17673 157 11 16 chrX 26444178 26447504 -140202792 - L1_Mus1 LINE L1 -1075 4808 1501 4 786 6670 159 28 2 chrX 26447511 26448688 -140201608 - L1_Mus3 LINE L1 -690 5948 4735 4 786 216 86 0 0 chrX 26448688 26448723 -140201573 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 786 6670 174 30 2 chrX 26448723 26448858 -140201438 - L1_Mus3 LINE L1 -1149 4734 4601 4 786 597 207 9 0 chrX 26448857 26448968 -140201328 - Lx4A LINE L1 -228 6830 6719 4 786 2287 253 68 3 chrX 26449830 26450436 -140199860 - Lx2B LINE L1 -14 6986 6342 4 786 3176 164 40 16 chrX 26450433 26451060 -140199236 + L1_Mur2 LINE L1 4537 5178 -699 4 786 448 159 22 11 chrX 26451233 26451322 -140198974 - URR1B DNA MER1_type 0 225 136 4 786 23 33 0 0 chrX 26451427 26451457 -140198839 + AT_rich Low_complexity Low_complexity 1 30 0 4 786 3064 239 22 11 chrX 26451597 26452587 -140197709 - Lx6 LINE L1 -1352 6108 5105 4 786 1046 230 40 18 chrX 26452592 26452920 -140197376 - Lx6 LINE L1 -2035 3845 3511 4 786 680 233 67 34 chrX 26452920 26453082 -140197214 - Lx6 LINE L1 -3397 2480 2324 4 786 513 0 0 0 chrX 26453082 26453139 -140197157 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 786 680 233 67 34 chrX 26453139 26453185 -140197111 - Lx6 LINE L1 -3554 2323 2266 4 786 620 311 60 28 chrX 26453191 26453409 -140196887 - ORR1D2 LTR MaLR -145 225 1 4 786 337 370 0 0 chrX 26453416 26453551 -140196745 + Lx7 LINE L1 6949 7083 -613 4 786 848 280 87 23 chrX 26453749 26454096 -140196200 + ORR1D2 LTR MaLR 1 369 -1 4 786 529 269 14 14 chrX 26454248 26454395 -140195901 + Lx8 LINE L1 6636 6782 -691 4 786 225 256 12 25 chrX 26454639 26454719 -140195577 - Lx9 LINE L1 -1398 6246 6168 4 786 262 445 0 0 chrX 26454773 26454910 -140195386 + RMER1C Other Other 536 672 -670 4 786 340 419 12 27 chrX 26455233 26455682 -140194614 + RMER1C Other Other 401 871 -471 4 786 381 154 0 0 chrX 26456101 26456192 -140194104 + A-rich Low_complexity Low_complexity 1 91 0 4 786 274 324 91 28 chrX 26456309 26456452 -140193844 + RMER1C Other Other 488 639 -703 4 786 10915 69 4 0 chrX 26456978 26457701 -140192595 - L1Md_A LINE L1 -3185 2698 1976 4 786 201 39 0 0 chrX 26457701 26457727 -140192569 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 786 10915 128 10 22 chrX 26457727 26459491 -140190805 - L1Md_A LINE L1 -3908 1975 233 4 786 363 420 30 27 chrX 26460949 26461594 -140188702 + RMER1C Other Other 390 877 -465 4 786 225 390 0 0 chrX 26461746 26461846 -140188450 + RMER1C Other Other 672 771 -571 4 786 569 410 40 23 chrX 26462100 26462999 -140187297 + RMER1C Other Other 392 867 -475 4 786 567 0 0 0 chrX 26463011 26463074 -140187222 + (TA)n Simple_repeat Simple_repeat 2 64 0 4 786 349 438 29 13 chrX 26463436 26463971 -140186325 + RMER1C Other Other 412 833 -509 4 786 295 411 31 31 chrX 26464085 26464281 -140186015 + RMER1C Other Other 566 761 -581 4 786 328 410 47 57 chrX 26464914 26465455 -140184841 + RMER1C Other Other 494 873 -469 4 786 313 425 9 32 chrX 26465925 26466288 -140184008 + RMER1C Other Other 476 783 -559 4 786 336 401 26 22 chrX 26466386 26466613 -140183683 + RMER1C Other Other 464 691 -651 4 786 21 0 0 0 chrX 26466754 26466775 -140183521 + AT_rich Low_complexity Low_complexity 1 21 0 4 786 357 441 13 7 chrX 26466866 26467174 -140183122 + RMER1C Other Other 510 819 -523 4 786 386 380 38 23 chrX 26467269 26467820 -140182476 + RMER1C Other Other 362 865 -477 4 786 10716 182 29 8 chrX 26468152 26471136 -140179160 - Lx4A LINE L1 -279 6779 3725 4 786 6488 185 36 6 chrX 26471148 26472686 -140177610 + Lx3C LINE L1 5353 6936 -40 4 786 224 314 36 62 chrX 26472686 26472716 -140177580 + B1_Mur1 SINE Alu 39 66 -83 4 786 258 32 0 0 chrX 26472716 26472747 -140177549 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4 786 361 213 0 13 chrX 26472752 26472828 -140177468 + ID_B1 SINE B4 148 222 -2 4 786 1322 169 9 0 chrX 26473120 26473345 -140176951 - Lx2 LINE L1 -6 6991 6765 4 786 4476 169 21 5 chrX 26473334 26474145 -140176151 - Lx2 LINE L1 -352 6645 5822 4 786 4487 101 5 5 chrX 26474157 26474801 -140175495 - L1_Mus1 LINE L1 0 6567 5924 4 98 36728 30 3 7 chrX 26474801 26480201 -140170095 + L1Md_T LINE L1 215 5587 -296 4 787 8215 43 1 0 chrX 26480202 26481195 -140169101 + L1Md_T LINE L1 5589 6582 0 4 787 9842 128 29 1 chrX 26481208 26482881 -140167415 - L1_Mus1 LINE L1 -630 5937 4229 4 787 2297 136 24 23 chrX 26532881 26533459 -140116837 - L1VL1 LINE L1 -2293 1405 864 1 787 2091 202 11 0 chrX 26533462 26533932 -140116364 - L1Md_F LINE L1 -5415 1104 630 2 787 443 246 16 8 chrX 26533943 26534070 -140116226 - L1Md_F LINE L1 -5814 705 578 2 787 505 295 25 108 chrX 26534101 26534579 -140115717 - L1VL1 LINE L1 -5941 477 1 1 787 881 161 62 14 chrX 26534625 26534833 -140115463 - L1_Mm LINE L1 -432 5451 5234 3 787 1077 267 82 0 chrX 26534997 26535289 -140115007 + MER2 DNA MER2_type 6 321 -24 4 787 871 273 10 0 chrX 26535709 26535914 -140114382 + B3 SINE B2 1 207 -9 5 787 327 25 0 0 chrX 26536000 26536040 -140114256 + (TTCC)n Simple_repeat Simple_repeat 2 41 0 6 787 602 271 29 68 chrX 26536109 26536315 -140113981 - B3A SINE B2 0 198 1 7 787 592 274 51 29 chrX 26536617 26536892 -140113404 + Lx7 LINE L1 5857 6137 -1559 8 787 1806 261 47 21 chrX 26536927 26537503 -140112793 + Lx7 LINE L1 6064 6654 -1042 8 787 451 158 0 0 chrX 26537769 26537845 -140112451 + RMER3D-int LTR ERVK 489 564 -2278 9 787 597 212 25 40 chrX 26537872 26538073 -140112223 + RMER3D-int LTR ERVK 652 849 -1993 9 787 469 226 71 39 chrX 26538139 26538495 -140111801 + RMER3D-int LTR ERVK 354 804 -2038 1 787 547 139 71 24 chrX 26538530 26538700 -140111596 + GA-rich Low_complexity Low_complexity 3 180 0 1 787 1523 183 165 29 chrX 26538745 26539067 -140111229 + RMER3D-int LTR ERVK 1014 1383 -1459 1 787 3207 53 2 0 chrX 26539067 26539462 -140110834 - MTA_Mm LTR MaLR 0 396 1 1 787 1523 193 13 36 chrX 26539462 26539619 -140110677 + RMER3D-int LTR ERVK 1384 1533 -1309 1 787 529 221 40 33 chrX 26539647 26539797 -140110499 + RMER3D-int LTR ERVK 1528 1678 -1164 1 787 2611 216 43 52 chrX 26539819 26540742 -140109554 + RMER3D-int LTR ERVK 1927 2841 -1 1 787 2847 98 7 2 chrX 26540743 26541162 -140109134 + BGLII LTR ERVK 1 421 0 1 787 1274 221 64 36 chrX 26541401 26541834 -140108462 - RLTR21 LTR ERVK -150 1254 706 1 787 11481 82 5 1 chrX 26541841 26544173 -140106123 - L1Md_F2 LINE L1 -19 6563 4225 1 787 12737 112 5 30 chrX 26544156 26546966 -140103330 - L1Md_F2 LINE L1 -2718 3165 217 1 787 850 154 11 51 chrX 26546969 26547147 -140103149 - RLTR21 LTR ERVK -855 717 547 1 787 345 24 0 0 chrX 26547154 26547196 -140103100 + (A)n Simple_repeat Simple_repeat 1 42 0 1 787 1436 220 22 40 chrX 26547213 26547535 -140102761 - RLTR21 LTR ERVK -1248 324 9 1 787 1558 261 21 28 chrX 26548041 26548275 -140102021 - Lx6 LINE L1 -1326 6134 5904 1 787 2023 198 17 14 chrX 26548275 26548695 -140101601 - MTC LTR MaLR 0 421 1 1 787 1558 261 21 28 chrX 26548695 26548992 -140101304 - Lx6 LINE L1 -1557 5903 5607 1 787 1006 206 25 3 chrX 26548999 26549282 -140101014 - L1_Mur3 LINE L1 -2593 3287 2999 1 787 3650 147 21 24 chrX 26549283 26549813 -140100483 - L1_Mus3 LINE L1 -8 6630 6101 1 787 2706 73 0 0 chrX 26549813 26550155 -140100141 - ORR1A1 LTR MaLR -4 342 1 2 787 3650 147 21 24 chrX 26550155 26550279 -140100017 - L1_Mus3 LINE L1 -538 6100 5978 1 787 4267 63 44 4 chrX 26550279 26551051 -140099245 + L1Md_F2 LINE L1 5273 6062 -520 2 787 324 78 15 15 chrX 26551051 26551116 -140099180 + L1Md_F2 LINE L1 6515 6579 -3 2 787 1129 313 7 31 chrX 26551116 26551538 -140098758 - RodERV21-int LTR ERV1 -3327 1664 1253 2 787 228 179 35 35 chrX 26552986 26553044 -140097252 + GA-rich Low_complexity Low_complexity 2 59 0 2 787 403 231 27 47 chrX 26553203 26553353 -140096943 - L1_Rod LINE L1 -305 5542 5396 2 787 2097 219 74 38 chrX 26553372 26553926 -140096370 + RLTR31A_Mm LTR ERVK 11 584 0 2 787 236 206 107 10 chrX 26553926 26554029 -140096267 - L1_Rod LINE L1 -475 5372 5260 2 787 808 150 7 52 chrX 26554168 26554326 -140095970 - B1_Mus2 SINE Alu 0 148 1 2 787 2803 328 46 49 chrX 26554731 26555022 -140095274 - RodERV21-int LTR ERV1 -198 4793 4501 2 787 2540 118 35 56 chrX 26555022 26555451 -140094845 - RLTR9B2 LTR ERVK 0 420 1 2 787 2803 328 46 49 chrX 26555451 26557260 -140093036 - RodERV21-int LTR ERV1 -491 4500 2702 2 787 662 291 22 5 chrX 26557640 26557864 -140092432 - MuRRS4-int LTR ERV1 -130 4933 4706 2 787 12642 24 10 0 chrX 26557892 26560017 -140090279 - L1Md_A LINE L1 0 6582 4445 3 787 8362 42 0 1 chrX 26560015 26561062 -140089234 - L1Md_T LINE L1 0 6582 5537 3 787 488 219 0 19 chrX 26561067 26561174 -140089122 - RLTR6-int LTR ERV1 -257 7521 7417 3 787 764 164 0 7 chrX 26561174 26561309 -140088987 - MuRRS4-int LTR ERV1 -128 4935 4802 3 787 5240 170 57 63 chrX 26561314 26563611 -140086685 - MuRRS4-int LTR ERV1 -792 4271 1116 3 787 1477 272 33 7 chrX 26563649 26564071 -140086225 - MuRRS4-int LTR ERV1 -3619 1444 1012 3 787 728 266 16 74 chrX 26564218 26564474 -140085822 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 3 787 599 130 111 17 chrX 26564474 26564591 -140085705 - MuRRS4-int LTR ERV1 -4186 877 750 3 787 441 170 10 96 chrX 26564575 26564679 -140085617 - ETnERV-int LTR ERVK -3958 1448 1354 3 787 1045 157 39 6 chrX 26564779 26564958 -140085338 - ETnERV-int LTR ERVK -4045 1361 1177 3 787 1950 74 4 7 chrX 26564955 26565226 -140085070 - ETnERV-int LTR ERVK -3982 862 593 3 787 3708 53 0 7 chrX 26565223 26565679 -140084617 - ETnERV-int LTR ERVK -2861 453 1 3 787 1142 160 30 30 chrX 26565679 26565911 -140084385 - RLTRETN_Mm LTR ERVK 0 322 91 3 787 38445 26 8 8 chrX 26565937 26572552 -140077744 + L1Md_A LINE L1 1 5586 -297 3 787 9280 17 0 0 chrX 26572553 26573543 -140076753 + L1Md_A LINE L1 5588 6577 -5 3 787 743 61 0 115 chrX 26573568 26573698 -140076598 - RLTRETN_Mm LTR ERVK -207 115 1 3 787 7125 198 43 29 chrX 26573698 26575204 -140075092 - RLTR14-int LTR ERV1 -596 4721 3195 3 787 1286 175 187 45 chrX 26575204 26575562 -140074734 + RLTR9E LTR ERVK 1 409 0 3 787 737 230 17 69 chrX 26575564 26575887 -140074409 + ETnERV2-int LTR ERVK 2 372 -2942 3 787 278 182 0 18 chrX 26575882 26575938 -140074358 + RLTR45-int LTR ERVK 2091 2145 -5099 4 787 2025 181 74 19 chrX 26576405 26576878 -140073418 + ETnERV2-int LTR ERVK 1590 2088 -5318 3 787 2834 182 34 30 chrX 26576899 26577553 -140072743 + ETnERV2-int LTR ERVK 1934 3123 -4283 3 787 33994 84 2 3 chrX 26577554 26583034 -140067262 - L1Md_F2 LINE L1 -14 6568 1105 4 787 35437 81 2 13 chrX 26583028 26589167 -140061129 - L1Md_F2 LINE L1 0 6582 519 4 787 299 83 21 0 chrX 26589168 26589216 -140061080 - L1Md_F LINE L1 -5494 1025 977 4 787 6644 117 7 50 chrX 26589207 26591134 -140059162 - L1Md_F LINE L1 -3728 2155 315 4 787 6935 93 3 7 chrX 26591135 26592075 -140058221 - L1Md_F LINE L1 -5494 1025 90 4 787 786 264 22 124 chrX 26592130 26592226 -140058070 + MMETn-int LTR ERVK 5037 5122 -2122 4 787 5127 63 0 7 chrX 26592226 26592835 -140057461 + L1Md_F2 LINE L1 5966 6570 -12 4 787 3158 183 15 42 chrX 26592835 26593774 -140056522 + MMETn-int LTR ERVK 2541 3719 -1125 4 787 779 195 0 0 chrX 26593769 26593892 -140056404 + MMETn-int LTR ERVK 6539 6661 -745 4 787 2625 203 104 17 chrX 26593922 26594626 -140055670 - RLTR14-int LTR ERV1 -2117 3200 2436 4 787 1823 231 56 31 chrX 26596083 26596605 -140053691 + RLTR40 LTR ERVK 22 556 -261 4 787 359 194 10 0 chrX 26596607 26596710 -140053586 + GA-rich Low_complexity Low_complexity 2 105 0 5 787 616 294 57 32 chrX 26596710 26596893 -140053403 + RLTR40 LTR ERVK 566 752 -65 4 787 6612 93 34 2 chrX 26596893 26597307 -140052989 - RLTR13B1 LTR ERVK 0 893 476 5 787 396 0 0 0 chrX 26597307 26597351 -140052945 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 787 6612 93 34 2 chrX 26597351 26597802 -140052494 - RLTR13B1 LTR ERVK -418 475 3 5 787 616 294 57 32 chrX 26597802 26597864 -140052432 + RLTR40 LTR ERVK 753 817 0 4 787 383 0 0 21 chrX 26598055 26598103 -140052193 + (TAA)n Simple_repeat Simple_repeat 2 48 0 5 787 771 226 57 10 chrX 26599634 26599826 -140050470 - Lx9 LINE L1 -243 7401 7201 5 787 433 191 0 0 chrX 26599826 26599910 -140050386 + Lx9 LINE L1 7554 7637 -7 5 787 516 287 13 0 chrX 26599919 26600069 -140050227 + Lx5 LINE L1 6825 6976 -74 5 787 393 22 0 0 chrX 26600077 26600123 -140050173 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 5 787 652 231 35 14 chrX 26600135 26600280 -140050016 + B1_Mur2 SINE Alu 1 148 -1 5 787 2102 162 31 0 chrX 26600288 26600647 -140049649 + L1_Mus3 LINE L1 6261 6630 -8 5 787 28 48 0 0 chrX 26600660 26600702 -140049594 + AT_rich Low_complexity Low_complexity 1 42 0 6 787 717 274 19 14 chrX 26600830 26601041 -140049255 + Lx4B LINE L1 6809 7020 -38 6 787 2951 179 32 2 chrX 26601077 26601669 -140048627 - L1_Mur2 LINE L1 -1176 4701 4092 6 787 9999 144 33 23 chrX 26601669 26603039 -140047257 - RLTR22_Mur LTR ERVK 0 1848 461 6 787 457 55 0 27 chrX 26603039 26603114 -140047182 + (TAG)n Simple_repeat Simple_repeat 3 75 0 6 787 9999 144 33 23 chrX 26603114 26603573 -140046723 - RLTR22_Mur LTR ERVK -1388 460 1 6 787 917 156 198 0 chrX 26603573 26603816 -140046480 - L1_Mur2 LINE L1 -1782 4095 3805 6 787 1458 142 25 4 chrX 26603858 26604099 -140046197 + L1_Mus4 LINE L1 6391 6636 0 6 787 180 0 0 0 chrX 26604588 26604608 -140045688 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 6 787 24 0 0 0 chrX 26606001 26606025 -140044271 + AT_rich Low_complexity Low_complexity 1 24 0 6 787 423 261 22 7 chrX 26606310 26606445 -140043851 + L1_Mur2 LINE L1 4334 4470 -1407 6 787 1688 44 44 0 chrX 26606470 26606675 -140043621 + L1Md_F2 LINE L1 6357 6570 -12 6 787 1216 187 83 64 chrX 26606675 26607105 -140043191 + RLTR21 LTR ERVK 706 1251 -153 7 98 3028 100 7 2 chrX 26607346 26607765 -140042531 - BGLII LTR ERVK 0 421 1 7 788 2844 213 119 8 chrX 26607765 26608682 -140041614 - MYSERV16_I-int LTR ERVK 0 2326 1308 7 788 2153 216 88 78 chrX 26608704 26609039 -140041257 - RMER3D-int LTR ERVK -1164 1678 1384 7 788 3403 53 5 0 chrX 26609039 26609433 -140040863 + MTA_Mm LTR MaLR 1 396 0 7 788 2153 210 85 59 chrX 26609433 26609778 -140040518 - RMER3D-int LTR ERVK -1459 1383 1016 7 788 483 158 11 68 chrX 26609800 26609990 -140040306 + CT-rich Low_complexity Low_complexity 2 180 0 7 788 607 221 73 41 chrX 26610003 26610321 -140039975 - RMER3D-int LTR ERVK -2036 806 354 7 788 690 220 59 58 chrX 26610342 26610691 -140039605 - RMER3D-int LTR ERVK -1993 849 489 7 788 1971 267 50 19 chrX 26610955 26611531 -140038765 - Lx7 LINE L1 -1042 6654 6061 7 788 709 241 69 47 chrX 26611567 26611842 -140038454 - Lx7 LINE L1 -1559 6137 5857 7 788 1101 260 82 0 chrX 26612241 26612533 -140037763 - MER2 DNA MER2_type -24 321 6 7 788 851 162 62 19 chrX 26612698 26612906 -140037390 + L1_Mm LINE L1 5234 5450 -433 7 788 507 259 35 139 chrX 26612952 26613401 -140036895 + L1VL1 LINE L1 273 608 -6030 7 788 452 238 16 8 chrX 26613461 26613588 -140036708 + L1Md_F LINE L1 578 705 -5814 8 788 2111 200 11 0 chrX 26613599 26614073 -140036223 + L1Md_F LINE L1 630 1108 -5411 8 788 18330 187 20 70 chrX 26614070 26619027 -140031269 + L1VL1 LINE L1 1071 5741 -145 7 788 1615 63 13 5 chrX 26619027 26619251 -140031045 + MT2_Mm LTR ERVL 268 493 0 8 788 957 128 0 0 chrX 26619263 26619419 -140030877 - L1_Mm LINE L1 -1522 4361 4206 8 788 521 197 74 0 chrX 26619412 26619534 -140030762 - Lx3C LINE L1 -553 6423 6293 8 788 1615 196 9 3 chrX 26619522 26619865 -140030431 - L1_Mur1 LINE L1 -189 5697 5353 8 788 10144 185 30 8 chrX 26619877 26622859 -140027437 + Lx4B LINE L1 3725 6782 -276 8 788 286 371 71 12 chrX 26623120 26623360 -140026936 - RMER1C Other Other -494 848 595 8 788 280 407 20 15 chrX 26623528 26623725 -140026571 - RMER1C Other Other -585 757 560 8 788 390 419 12 0 chrX 26623834 26624082 -140026214 - RMER1C Other Other -671 671 421 8 788 284 409 26 19 chrX 26624362 26624626 -140025670 - RMER1C Other Other -613 729 464 8 788 273 425 12 32 chrX 26624742 26625087 -140025209 - RMER1C Other Other -496 846 509 9 788 288 390 17 50 chrX 26625723 26625904 -140024392 - RMER1C Other Other -691 651 383 9 788 256 433 18 14 chrX 26627277 26627556 -140022740 - RMER1C Other Other -478 864 585 9 788 387 0 0 0 chrX 26627944 26627987 -140022309 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 788 254 328 36 29 chrX 26628103 26628241 -140022055 - RMER1C Other Other -753 589 451 9 788 412 403 41 19 chrX 26628458 26628908 -140021388 - RMER1C Other Other -468 874 412 9 788 282 422 23 17 chrX 26629411 26629758 -140020538 - RMER1C Other Other -507 835 487 9 788 294 29 0 0 chrX 26630346 26630381 -140019915 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 9 788 30738 88 4 14 chrX 26631588 26637003 -140013293 + L1Md_F3 LINE L1 233 5586 -297 9 788 7666 70 6 0 chrX 26637003 26637995 -140012301 + L1Md_F3 LINE L1 5587 6584 0 9 788 433 58 34 23 chrX 26639837 26639925 -140010371 + (TTTTG)n Simple_repeat Simple_repeat 3 91 0 9 788 288 372 0 0 chrX 26640684 26640805 -140009491 - RMER1C Other Other -685 657 537 9 788 458 256 8 23 chrX 26641654 26641786 -140008510 - Lx8 LINE L1 -704 6769 6640 1 788 906 284 35 35 chrX 26641941 26642309 -140007987 - ORR1D2 LTR MaLR -2 368 1 1 788 423 389 4 0 chrX 26642414 26642648 -140007648 - Lx8 LINE L1 -283 7190 6956 1 788 627 327 47 14 chrX 26642650 26642861 -140007435 + ORR1D2 LTR MaLR 1 218 -152 1 788 593 267 47 24 chrX 26642874 26642922 -140007374 + Lx6 LINE L1 2265 2322 -3555 1 788 477 0 0 0 chrX 26642922 26642975 -140007321 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 788 593 267 47 24 chrX 26642975 26643137 -140007159 + Lx6 LINE L1 2323 2479 -3398 1 788 1112 217 40 12 chrX 26643137 26643463 -140006833 + Lx6 LINE L1 3510 3844 -2033 1 788 2760 245 21 14 chrX 26643468 26644461 -140005835 + Lx6 LINE L1 5105 6108 -1352 1 788 25 31 0 0 chrX 26644601 26644633 -140005663 + AT_rich Low_complexity Low_complexity 1 32 0 1 788 354 284 71 47 chrX 26644771 26644941 -140005355 - RLTR1B LTR ERV1 -173 339 166 1 788 428 150 78 20 chrX 26645273 26645300 -140004996 + URR1B DNA MER1_type 118 144 -81 1 788 288 0 0 0 chrX 26645300 26645332 -140004964 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 788 428 150 78 20 chrX 26645332 26645406 -140004890 + URR1B DNA MER1_type 145 224 -1 1 788 2934 156 66 13 chrX 26645579 26646028 -140004268 - L1_Mur2 LINE L1 -699 5178 4731 1 788 216 0 0 0 chrX 26646028 26646052 -140004244 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1 788 2934 156 66 13 chrX 26646052 26646212 -140004084 - L1_Mur2 LINE L1 -1147 4730 4537 1 788 2016 258 68 3 chrX 26646209 26646815 -140003481 + Lx2B LINE L1 6342 6986 -14 1 788 571 198 9 0 chrX 26647668 26647779 -140002517 + Lx4A LINE L1 6719 6830 -228 1 788 6447 156 27 6 chrX 26647778 26649100 -140001196 + L1_Mus3 LINE L1 4601 5948 -690 1 788 22411 145 14 54 chrX 26649098 26652602 -139997694 + L1_Mus1 LINE L1 1492 4795 -1088 1 788 7223 80 5 14 chrX 26652602 26653606 -139996690 + L1Md_F2 LINE L1 5588 6582 0 1 788 22411 119 21 38 chrX 26653606 26655377 -139994919 + L1_Mus1 LINE L1 4796 6567 0 1 788 261 0 0 0 chrX 26655497 26655526 -139994770 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 788 234 202 54 18 chrX 26655615 26655693 -139994603 - LTRIS_Mus LTR ERV1 0 587 544 1 788 24951 34 20 0 chrX 26655693 26659112 -139991184 - RLTR6-int LTR ERV1 -4213 3565 2 1 788 1881 143 244 30 chrX 26659114 26659581 -139990715 - RLTR6_Mm LTR ERV1 -51 603 37 1 788 481 293 66 13 chrX 26659695 26659847 -139990449 + B3 SINE B2 4 163 -53 1 788 233 278 0 65 chrX 26659851 26659928 -139990368 + B4A SINE B4 82 153 -139 1 788 250 322 34 22 chrX 26659932 26660021 -139990275 + B3 SINE B2 113 202 -14 1 788 267 350 20 10 chrX 26660925 26661026 -139989270 - PB1D10 SINE Alu -15 102 1 1 788 287 279 15 0 chrX 26660962 26661030 -139989266 - B4A SINE B4 -142 150 82 1 788 534 103 0 0 chrX 26661634 26661712 -139988584 + (CATATA)n Simple_repeat Simple_repeat 3 80 0 1 788 24138 144 5 1 chrX 26662345 26667516 -139982780 - L1_Mus3 LINE L1 -4 6634 1445 1 788 291 339 49 8 chrX 26667767 26667889 -139982407 + B1F SINE Alu 20 146 -3 1 788 213 296 0 0 chrX 26668193 26668237 -139982059 - ID4 SINE ID -36 47 4 1 788 230 310 127 0 chrX 26668470 26668541 -139981755 + ID4 SINE ID 4 83 0 1 788 371 251 160 10 chrX 26668805 26669005 -139981291 + B4 SINE B4 1 230 -62 1 788 1052 91 7 0 chrX 26669006 26669149 -139981147 + B1_Mus1 SINE Alu 4 147 -1 1 788 841 296 14 24 chrX 26669404 26669615 -139980681 + B3 SINE B2 2 210 -6 1 788 273 274 101 28 chrX 26670398 26670507 -139979789 - B1F SINE Alu -32 117 1 1 788 241 325 47 70 chrX 26670507 26670527 -139979769 - ID_B1 SINE B4 -29 195 70 1 788 273 269 95 69 chrX 26670522 26670638 -139979658 - B1F SINE Alu -2 147 29 1 788 561 15 0 0 chrX 26670957 26671023 -139979273 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 788 555 16 0 0 chrX 26671024 26671088 -139979208 + (GA)n Simple_repeat Simple_repeat 2 65 0 1 788 5296 139 19 1 chrX 26672384 26673235 -139977061 - Lx LINE L1 -2 6652 5787 1 788 15972 158 19 53 chrX 26673236 26675172 -139975124 - L1VL2 LINE L1 -1127 4756 2824 1 788 642 13 0 0 chrX 26675172 26675247 -139975049 + (TA)n Simple_repeat Simple_repeat 2 76 0 1 788 15972 158 19 53 chrX 26675247 26675332 -139974964 - L1VL2 LINE L1 -3060 2823 2808 1 788 955 119 0 0 chrX 26675332 26675466 -139974830 - B1_Mus2 SINE Alu -13 134 1 1 788 15972 176 33 59 chrX 26675466 26678155 -139972141 - L1VL2 LINE L1 -3076 2807 300 1 788 22 56 0 0 chrX 26678248 26678284 -139972012 + AT_rich Low_complexity Low_complexity 1 36 0 1 788 672 326 93 30 chrX 26678293 26678562 -139971734 - B4A SINE B4 -3 289 4 1 788 958 227 19 0 chrX 26678795 26679002 -139971294 - B3 SINE B2 -5 211 1 1 788 379 283 67 0 chrX 26679148 26679268 -139971028 - B1F SINE Alu -1 148 21 1 788 427 291 10 0 chrX 26679328 26679431 -139970865 - B3 SINE B2 -15 201 98 1 788 4599 132 15 18 chrX 26680273 26681067 -139969229 - YREP_Mm Unknown Unknown -35 1777 986 1 788 334 332 111 34 chrX 26681072 26681306 -139968990 - L2 LINE L2 -1119 2300 2049 1 788 228 86 0 0 chrX 26681402 26681437 -139968859 + (CCA)n Simple_repeat Simple_repeat 1 35 0 1 788 549 339 40 15 chrX 26681483 26681690 -139968606 + B4A SINE B4 83 290 -2 1 788 228 362 28 21 chrX 26682161 26682302 -139967994 - L2 LINE L2 -1760 1659 1518 1 788 5271 123 71 29 chrX 26683640 26684561 -139965735 - Lx3A LINE L1 -7 6974 6016 1 788 305 307 56 70 chrX 26685013 26685297 -139964999 + RMER17C LTR ERVK 83 362 -48 1 788 812 120 35 21 chrX 26685576 26685721 -139964575 + L1_Mus1 LINE L1 6421 6567 0 1 788 3587 79 8 30 chrX 26685725 26686552 -139963744 - L1Md_A LINE L1 -4124 1759 964 1 788 29482 82 6 41 chrX 26686547 26689655 -139960641 - L1Md_F2 LINE L1 -1 6581 3464 1 788 1136 90 73 0 chrX 26689655 26689833 -139960463 - B2_Mm2 SINE B2 0 195 5 1 788 29482 108 16 49 chrX 26689833 26693265 -139957031 - L1Md_F2 LINE L1 -2420 3463 277 1 788 1304 179 52 0 chrX 26693265 26693516 -139956780 - L1VL1 LINE L1 -6156 266 3 1 788 20805 135 7 4 chrX 26693517 26694356 -139955940 + L1_Mus1 LINE L1 2294 3132 -2751 1 788 210 37 0 0 chrX 26694356 26694383 -139955913 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 788 20805 123 6 3 chrX 26694383 26697375 -139952921 + L1_Mus1 LINE L1 3133 6136 -431 1 788 1159 70 6 0 chrX 26697375 26697532 -139952764 + L1_Mus1 LINE L1 6410 6567 0 1 788 1441 194 20 90 chrX 26697534 26697988 -139952308 + L1_Mur2 LINE L1 3320 3741 -2136 1 788 718 331 43 26 chrX 26697965 26698399 -139951897 - Lx6 LINE L1 -164 7296 6506 1 788 295 276 22 7 chrX 26698404 26698539 -139951757 - L1_Mur2 LINE L1 -1407 4470 4334 1 788 24 0 0 0 chrX 26698823 26698847 -139951449 + AT_rich Low_complexity Low_complexity 1 24 0 1 788 180 0 0 0 chrX 26700239 26700259 -139950037 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 1 788 11083 35 0 1 chrX 26700630 26702685 -139947611 - L1Md_T LINE L1 0 6582 4529 1 788 1341 138 29 4 chrX 26702717 26702957 -139947339 - L1_Mus4 LINE L1 0 6636 6391 1 788 1143 197 17 14 chrX 26703001 26703289 -139947007 + L1_Mur2 LINE L1 3807 4095 -1782 1 788 10096 141 39 25 chrX 26703289 26703736 -139946560 + RLTR22_Mur LTR ERVK 1 444 -1404 1 788 595 90 0 20 chrX 26703736 26703838 -139946458 + (CTA)n Simple_repeat Simple_repeat 3 102 0 1 788 10096 141 39 25 chrX 26703838 26705213 -139945083 + RLTR22_Mur LTR ERVK 445 1847 -1 1 788 2711 175 37 2 chrX 26705213 26705802 -139944494 + L1_Mur2 LINE L1 4092 4701 -1176 1 788 698 261 19 14 chrX 26705838 26706052 -139944244 - Lx4B LINE L1 -35 7023 6809 1 788 227 263 0 0 chrX 26706060 26706117 -139944179 + T-rich Low_complexity Low_complexity 4 60 0 1 788 26 50 0 0 chrX 26706183 26706223 -139944073 + AT_rich Low_complexity Low_complexity 1 40 0 1 788 1920 159 45 0 chrX 26706235 26706588 -139943708 - L1_Mus3 LINE L1 -8 6630 6262 1 788 660 208 34 14 chrX 26706616 26706762 -139943534 - B1_Mur3 SINE Alu 0 149 1 1 788 351 0 0 0 chrX 26706777 26706816 -139943480 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1 788 488 287 13 0 chrX 26706824 26706974 -139943322 - Lx5 LINE L1 -74 6976 6825 1 788 401 191 0 0 chrX 26706983 26707067 -139943229 - Lx9 LINE L1 -7 7637 7554 1 788 645 228 60 11 chrX 26707067 26707249 -139943047 + Lx9 LINE L1 7201 7391 -253 1 788 1276 27 0 0 chrX 26708465 26708612 -139941684 - B1_Mus2 SINE Alu 0 147 1 1 788 279 0 0 0 chrX 26708985 26709016 -139941280 + (TTC)n Simple_repeat Simple_repeat 2 32 0 1 788 243 0 0 0 chrX 26709016 26709043 -139941253 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1 788 503 291 73 53 chrX 26709234 26709296 -139941000 - RLTR40 LTR ERVK 0 817 753 1 788 6211 96 24 5 chrX 26709296 26710172 -139940124 + RLTR13B1 LTR ERVK 1 893 0 1 788 503 291 73 53 chrX 26710172 26710356 -139939940 - RLTR40 LTR ERVK -65 752 566 1 788 207 69 0 0 chrX 26710356 26710385 -139939911 + (CTCG)n Simple_repeat Simple_repeat 2 30 0 1 788 329 149 15 0 chrX 26710378 26710445 -139939851 + CT-rich Low_complexity Low_complexity 2 69 0 1 788 1856 217 63 44 chrX 26710445 26710970 -139939326 - RLTR40 LTR ERVK -261 556 22 1 788 3156 206 44 17 chrX 26712413 26713158 -139937138 + RLTR14-int LTR ERV1 2436 3200 -2117 1 788 670 219 0 0 chrX 26713189 26713312 -139936984 - MMETn-int LTR ERVK -745 6661 6539 1 788 2884 171 13 41 chrX 26713307 26714226 -139936070 - MMETn-int LTR ERVK -1703 3141 2541 1 788 319 16 95 0 chrX 26714226 26714289 -139936007 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 1 788 4869 55 0 7 chrX 26714301 26714910 -139935386 - L1Md_F2 LINE L1 -12 6570 5966 1 788 379 152 0 6 chrX 26714911 26715003 -139935293 - MMETn-int LTR ERVK -2291 2553 2473 1 788 6589 88 1 6 chrX 26715071 26716007 -139934289 + L1Md_F LINE L1 95 1025 -5494 1 788 29527 99 5 21 chrX 26716008 26721371 -139928925 + L1Md_F2 LINE L1 315 5587 -296 1 788 7885 49 2 3 chrX 26721372 26722355 -139927941 + L1Md_F2 LINE L1 5589 6570 -12 1 788 1050 210 155 16 chrX 26722381 26722691 -139927605 - ETnERV2-int LTR ERVK -2295 4949 4597 1 788 3872 131 47 3 chrX 26722677 26723298 -139926998 - ETnERV2-int LTR ERVK -3318 4088 3441 1 788 841 142 6 105 chrX 26723523 26723704 -139926592 - MMETn-int LTR ERVK -2654 2190 2028 1 788 557 112 0 0 chrX 26723704 26723778 -139926518 + L1_Mm LINE L1 5513 5615 -2170 1 788 8062 70 1 10 chrX 26723778 26724769 -139925527 + L1Md_F2 LINE L1 5587 6568 -14 1 788 287 286 21 21 chrX 26724769 26724787 -139925509 + L1_Mm LINE L1 5616 5633 -2152 1 788 2902 187 40 28 chrX 26724791 26725424 -139924872 - ETnERV2-int LTR ERVK -4271 3135 2496 1 788 1960 176 64 12 chrX 26725445 26725864 -139924432 - ETnERV2-int LTR ERVK -5318 2088 1648 1 788 735 12 0 0 chrX 26725871 26725955 -139924341 + (GAA)n Simple_repeat Simple_repeat 2 85 0 1 788 292 167 0 0 chrX 26725958 26726012 -139924284 - MMETn-int LTR ERVK -5212 194 141 1 788 346 146 0 18 chrX 26726447 26726503 -139923793 - MMETn-int LTR ERVK -6278 1128 1074 1 788 765 252 12 104 chrX 26726493 26726821 -139923475 - MMETn-int LTR ERVK -4545 299 2 1 788 1248 170 190 48 chrX 26726823 26727181 -139923115 - RLTR9E LTR ERVK 0 409 1 1 788 8839 190 105 26 chrX 26727181 26729145 -139921151 + RLTR14-int LTR ERV1 3195 5312 -5 1 788 1651 193 12 21 chrX 26729170 26729498 -139920798 + RLTR14 LTR ERV1 7 331 -51 1 788 1532 137 0 0 chrX 26729498 26729724 -139920572 - L1_Mus3 LINE L1 -185 5698 5473 2 788 4530 108 24 0 chrX 26729726 26730390 -139919906 + L1_Mus3 LINE L1 5712 6391 -247 2 788 1348 284 14 49 chrX 26730395 26730825 -139919471 + RodERV21-int LTR ERV1 2304 2718 -2273 2 788 510 349 27 42 chrX 26730950 26731428 -139918868 + RodERV21-int LTR ERV1 3586 4056 -3035 2 788 305 24 24 0 chrX 26731587 26731629 -139918667 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 788 675 227 96 29 chrX 26732294 26732503 -139917793 + LTRIS4 LTR ERV1 285 507 0 2 788 691 241 51 79 chrX 26732505 26733056 -139917240 + MuRRS4-int LTR ERV1 5 498 -4565 2 788 1201 240 66 22 chrX 26733391 26733711 -139916585 + MuRRS4-int LTR ERV1 342 675 -4388 2 788 4347 128 25 10 chrX 26733740 26734426 -139915870 + RMER16-int LTR ERVK 666 1361 -4045 2 788 337 172 80 34 chrX 26734515 26734633 -139915663 + RMER16-int LTR ERVK 1386 1448 -3958 2 788 622 145 92 17 chrX 26734617 26734736 -139915560 + MuRRS4-int LTR ERV1 750 877 -4186 2 788 753 192 0 79 chrX 26734736 26734900 -139915396 - LSU-rRNA_Hsa rRNA rRNA -1371 3664 3514 2 788 1471 272 33 7 chrX 26735142 26735564 -139914732 + MuRRS4-int LTR ERV1 1012 1444 -3619 2 788 5276 155 63 24 chrX 26735586 26737893 -139912403 + MuRRS4-int LTR ERV1 1104 4271 -792 2 788 755 196 0 7 chrX 26737884 26738033 -139912263 + MuRRS4-int LTR ERV1 4788 4935 -128 2 788 1180 273 3 7 chrX 26738033 26738343 -139911953 + MuRRS4-int LTR ERV1 4637 4945 -118 2 789 3681 64 20 12 chrX 26738817 26739309 -139910987 - LTRIS2 LTR ERV1 0 564 69 2 789 1099 167 54 25 chrX 26739309 26739549 -139910747 - RLTR1B-int LTR ERV1 -26 5037 4791 2 789 1126 152 58 5 chrX 26739775 26740036 -139910260 - RLTR1B-int LTR ERV1 -486 2813 2669 2 789 5255 86 151 88 chrX 26740023 26741265 -139909031 - RLTR1B-int LTR ERV1 -744 2555 1260 2 789 183 42 0 0 chrX 26741265 26741289 -139909007 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 789 2641 199 115 44 chrX 26741289 26742186 -139908110 - RLTR1B-int LTR ERV1 -3266 1797 835 2 789 4112 155 52 18 chrX 26742190 26742895 -139907401 - RMER16-int LTR ERVK -3988 1418 690 2 789 966 126 90 17 chrX 26742881 26743059 -139907237 - RMER16-int LTR ERVK -5075 331 141 2 789 724 120 52 10 chrX 26743403 26743574 -139906722 - RLTR1B-int LTR ERV1 -3006 293 63 2 789 3555 76 20 18 chrX 26743723 26744218 -139906078 - LTRIS2 LTR ERV1 0 564 69 2 789 3666 319 40 47 chrX 26744333 26745944 -139904352 + RodERV21-int LTR ERV1 2905 4500 -491 2 789 2632 123 35 54 chrX 26745944 26746372 -139903924 + RLTR9B2 LTR ERVK 1 420 0 2 789 3666 319 40 47 chrX 26746372 26746663 -139903633 + RodERV21-int LTR ERV1 4501 4793 -198 2 789 295 260 30 30 chrX 26746731 26746830 -139903466 + RMER17C-int LTR ERVK 3138 3236 -2 2 789 853 145 13 46 chrX 26747074 26747226 -139903070 + B1_Mus1 SINE Alu 2 148 0 2 789 268 196 107 10 chrX 26747369 26747472 -139902824 + L1_Rod LINE L1 5260 5372 -475 2 789 2224 207 69 32 chrX 26747472 26748026 -139902270 - RLTR31A_Mm LTR ERVK 0 584 11 2 789 487 227 25 62 chrX 26748026 26748186 -139902110 + L1_Rod LINE L1 5381 5534 -313 2 789 209 169 49 33 chrX 26748351 26748412 -139901884 + CT-rich Low_complexity Low_complexity 2 63 0 2 789 1386 309 37 43 chrX 26749731 26750271 -139900025 + RodERV21-int LTR ERV1 1116 1652 -3339 2 789 7335 73 6 8 chrX 26750283 26751598 -139898698 - L1Md_F2 LINE L1 -2 6580 5274 2 789 3840 154 18 23 chrX 26751599 26751723 -139898573 + L1_Mus3 LINE L1 5978 6100 -538 2 789 2888 67 0 3 chrX 26751723 26752066 -139898230 + ORR1A1 LTR MaLR 1 342 -4 2 789 3840 154 18 23 chrX 26752066 26752597 -139897699 + L1_Mus3 LINE L1 6101 6630 -8 2 789 1155 203 28 3 chrX 26752598 26752880 -139897416 + L1_Mur3 LINE L1 2999 3287 -2593 2 789 1311 218 14 21 chrX 26752895 26753185 -139897111 + Lx7 LINE L1 5617 5904 -1792 2 789 2074 201 17 15 chrX 26753195 26753604 -139896692 + MTC LTR MaLR 12 421 0 2 789 462 317 26 18 chrX 26753610 26753838 -139896458 + Lx6 LINE L1 5905 6134 -1326 2 789 262 307 0 17 chrX 26753838 26753954 -139896342 + Lx6 LINE L1 7332 7445 -15 2 789 1489 215 24 40 chrX 26754350 26754679 -139895617 + RLTR21 LTR ERVK 1 324 -1248 2 789 198 0 0 0 chrX 26754696 26754718 -139895578 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2 789 674 184 17 51 chrX 26754726 26754903 -139895393 + RLTR21 LTR ERVK 547 717 -855 2 789 15980 134 211 17 chrX 26754906 26756449 -139893847 + L1Md_F2 LINE L1 446 1958 -3925 2 789 211 71 48 0 chrX 26756449 26756491 -139893805 + (CAA)n Simple_repeat Simple_repeat 2 45 0 2 789 15980 81 421 2 chrX 26756491 26758829 -139891467 + L1Md_F2 LINE L1 1959 5586 -297 2 789 7825 77 9 1 chrX 26758829 26759805 -139890491 + L1Md_F2 LINE L1 5587 6570 -12 2 789 1228 214 70 55 chrX 26759806 26760207 -139890089 + RLTR21 LTR ERVK 706 1112 -460 2 789 3031 98 7 7 chrX 26760477 26760898 -139889398 - BGLII LTR ERVK 0 421 1 2 789 2746 228 46 52 chrX 26760899 26761820 -139888476 - RMER3D-int LTR ERVK -1 2841 1927 2 789 2409 190 88 79 chrX 26761843 26762178 -139888118 - RMER3D-int LTR ERVK -1164 1678 1384 2 789 3555 38 2 0 chrX 26762178 26762573 -139887723 + MTA_Mm LTR MaLR 1 396 0 2 789 2409 188 85 60 chrX 26762573 26762919 -139887377 - RMER3D-int LTR ERVK -1459 1383 1016 2 789 503 184 0 63 chrX 26762941 26763132 -139887164 + CT-rich Low_complexity Low_complexity 2 180 0 2 789 620 233 30 39 chrX 26763145 26763443 -139886853 - RMER3D-int LTR ERVK -2032 810 354 2 789 578 225 35 40 chrX 26763529 26763728 -139886568 - RMER3D-int LTR ERVK -1993 849 652 2 789 514 133 0 0 chrX 26763743 26763831 -139886465 - RMER3D-int LTR ERVK -2278 564 489 2 789 2007 262 50 21 chrX 26764095 26764672 -139885624 - Lx7 LINE L1 -1042 6654 6061 2 789 699 265 49 35 chrX 26764698 26764983 -139885313 - Lx7 LINE L1 -1551 6145 5857 2 789 590 283 34 73 chrX 26765285 26765491 -139884805 + B3A SINE B2 1 198 0 2 789 417 39 0 0 chrX 26765559 26765610 -139884686 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 2 789 886 283 10 0 chrX 26765694 26765899 -139884397 - B3 SINE B2 -9 207 1 2 789 823 189 68 20 chrX 26766015 26766231 -139884065 + L1_Mm LINE L1 5252 5479 -694 2 789 607 289 15 116 chrX 26766268 26766726 -139883570 + L1_Mus1 LINE L1 264 608 -6030 2 789 505 255 18 36 chrX 26766774 26766941 -139883355 + L1Md_F LINE L1 566 729 -5790 2 789 2096 206 23 0 chrX 26766922 26767392 -139882904 + L1Md_F LINE L1 628 1108 -5411 2 789 17926 194 11 58 chrX 26767389 26773214 -139877082 + L1_Mus1 LINE L1 1071 6567 0 2 789 1523 208 16 3 chrX 26773227 26773541 -139876755 + Lx2 LINE L1 5823 6140 -857 2 789 3464 173 49 10 chrX 26773543 26774476 -139875820 - Lx3C LINE L1 -660 6316 5353 2 789 10678 182 33 10 chrX 26774488 26777467 -139872829 + Lx4A LINE L1 3725 6779 -279 2 789 452 384 46 51 chrX 26777570 26778386 -139871910 - RMER1C Other Other -458 884 362 2 789 396 423 43 23 chrX 26778446 26778840 -139871456 - RMER1C Other Other -523 819 418 2 789 413 401 26 19 chrX 26778962 26779226 -139871070 - RMER1C Other Other -613 729 464 2 789 286 432 12 43 chrX 26779342 26779664 -139870632 - RMER1C Other Other -496 846 535 2 789 468 0 0 0 chrX 26780102 26780154 -139870142 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 789 307 418 50 53 chrX 26780181 26780522 -139869774 - RMER1C Other Other -505 837 498 2 789 3335 11 0 0 chrX 26780530 26780908 -139869388 - L1Md_T LINE L1 0 6582 6205 2 789 30577 39 0 0 chrX 26780908 26785558 -139864738 + L1Md_Gf LINE L1 307 5054 -832 2 789 362 383 46 10 chrX 26786378 26786573 -139863723 - RMER1C Other Other -679 663 462 2 789 411 421 42 30 chrX 26786703 26787238 -139863058 - RMER1C Other Other -509 833 378 2 789 289 375 47 34 chrX 26787627 26787952 -139862344 - RMER1C Other Other -605 737 414 2 789 582 385 40 17 chrX 26788180 26788526 -139861770 - RMER1C Other Other -468 874 521 2 789 338 431 30 39 chrX 26789030 26789565 -139860731 - RMER1C Other Other -444 898 375 2 789 243 436 12 32 chrX 26790050 26790389 -139859907 - RMER1C Other Other -625 717 386 2 789 3587 169 8 3 chrX 26791119 26791767 -139858529 + L1Md_F2 LINE L1 441 1091 -5633 2 789 2683 96 0 2 chrX 26791765 26792160 -139858136 + L1Md_F2 LINE L1 1977 2370 -3513 2 789 20538 72 0 2 chrX 26792171 26794912 -139855384 + L1Md_F2 LINE L1 2850 5585 -298 2 789 7718 65 4 0 chrX 26794913 26795905 -139854391 + L1Md_F2 LINE L1 5587 6582 0 2 789 4050 74 0 0 chrX 26795905 26796738 -139853558 + L1Md_Gf LINE L1 833 1762 -4124 2 789 800 127 35 21 chrX 26796742 26796887 -139853409 - L1_Mus1 LINE L1 0 6567 6421 2 789 277 293 76 76 chrX 26797166 26797443 -139852853 - RMER17C LTR ERVK -48 362 86 2 789 5828 130 6 27 chrX 26797914 26798881 -139851415 + Lx3A LINE L1 6028 6974 -7 2 789 231 320 62 37 chrX 26800194 26800356 -139849940 + L2 LINE L2 1494 1659 -1760 2 789 181 347 52 10 chrX 26800719 26800815 -139849481 + L2 LINE L2 1926 2025 -1394 2 789 574 320 40 15 chrX 26800829 26801036 -139849260 - B4A SINE B4 -2 290 83 2 789 228 86 0 0 chrX 26801082 26801117 -139849179 + (TGG)n Simple_repeat Simple_repeat 1 35 0 2 789 346 325 115 39 chrX 26801213 26801447 -139848849 + L2 LINE L2 2049 2300 -1119 2 789 4625 131 12 19 chrX 26801452 26802249 -139848047 + YREP_Mm Unknown Unknown 986 1777 -35 2 789 454 289 0 0 chrX 26803090 26803194 -139847102 + B3 SINE B2 98 201 -15 2 789 384 252 75 8 chrX 26803254 26803374 -139846922 + B1F SINE Alu 21 148 -1 2 789 912 237 19 0 chrX 26803520 26803727 -139846569 + B3 SINE B2 1 211 -5 2 789 624 327 97 34 chrX 26803960 26804229 -139846067 + B4A SINE B4 4 289 -3 2 789 17305 176 37 49 chrX 26804359 26807052 -139843244 + L1VL2 LINE L1 300 2807 -3076 2 789 893 127 0 0 chrX 26807052 26807186 -139843110 + B1_Mus2 SINE Alu 1 134 -13 2 789 267 93 0 0 chrX 26807196 26807239 -139843057 + (TAA)n Simple_repeat Simple_repeat 2 44 0 2 789 17305 161 20 38 chrX 26807239 26809197 -139841099 + L1VL2 LINE L1 2809 4755 -1128 2 789 5186 145 19 1 chrX 26809198 26810049 -139840247 + Lx LINE L1 5787 6652 -2 2 789 21 0 0 0 chrX 26810049 26810070 -139840226 + AT_rich Low_complexity Low_complexity 1 21 0 2 789 26 88 0 0 chrX 26810113 26810181 -139840115 + AT_rich Low_complexity Low_complexity 1 68 0 2 789 375 23 0 0 chrX 26811345 26811389 -139838907 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 789 417 20 0 0 chrX 26811390 26811440 -139838856 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 789 280 259 95 69 chrX 26811760 26811876 -139838420 + B1F SINE Alu 29 147 -2 2 789 228 333 47 70 chrX 26811871 26811891 -139838405 + ID_B1 SINE B4 70 195 -29 2 789 248 292 101 28 chrX 26811891 26812000 -139838296 + B1F SINE Alu 1 117 -32 2 789 805 275 44 29 chrX 26812783 26812989 -139837307 - B3 SINE B2 -6 210 2 2 789 921 127 14 0 chrX 26813244 26813386 -139836910 - B1_Mus1 SINE Alu -1 147 4 2 789 358 264 162 10 chrX 26813387 26813585 -139836711 - B4 SINE B4 -62 230 3 2 789 21 36 0 0 chrX 26814222 26814250 -139836046 + AT_rich Low_complexity Low_complexity 1 28 0 2 789 321 322 49 8 chrX 26814498 26814620 -139835676 - B1F SINE Alu -3 146 20 2 789 25300 147 6 2 chrX 26814870 26820041 -139830255 + L1_Mus3 LINE L1 1445 6634 -4 2 789 208 147 0 0 chrX 26820472 26820506 -139829790 + (A)n Simple_repeat Simple_repeat 1 34 0 2 789 195 129 0 0 chrX 26820688 26820719 -139829577 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 789 369 0 0 0 chrX 26820721 26820762 -139829534 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 789 297 0 0 0 chrX 26820762 26820795 -139829501 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 789 264 350 20 10 chrX 26821370 26821471 -139828825 + PB1D10 SINE Alu 1 102 -15 2 789 235 352 22 11 chrX 26822375 26822464 -139827832 - B3 SINE B2 -14 202 113 2 789 213 284 0 69 chrX 26822468 26822540 -139827756 - B4A SINE B4 -139 153 87 2 789 452 305 65 13 chrX 26822549 26822702 -139827594 - B3 SINE B2 -53 163 3 3 789 441 0 0 0 chrX 26822786 26822835 -139827461 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 789 6984 105 23 16 chrX 26822955 26824747 -139825549 - L1_Mus1 LINE L1 0 6567 4778 3 789 7250 82 8 6 chrX 26824728 26825906 -139824390 - L1Md_F2 LINE L1 0 6582 5405 3 789 4670 148 12 40 chrX 26825904 26826796 -139823500 - L1_Mus1 LINE L1 -1075 4808 3942 3 790 2240 48 0 0 chrX 26876796 26877067 -139773229 + L1Md_F2 LINE L1 5315 5585 -298 3 790 7718 65 4 0 chrX 26877068 26878060 -139772236 + L1Md_F2 LINE L1 5587 6582 0 3 790 4034 75 0 0 chrX 26878060 26878893 -139771403 + L1Md_Gf LINE L1 833 1762 -4124 3 790 800 127 35 21 chrX 26878897 26879042 -139771254 - L1_Mus1 LINE L1 0 6567 6421 3 790 273 307 56 70 chrX 26879321 26879605 -139770691 - RMER17C LTR ERVK -48 362 83 3 790 24 0 0 0 chrX 26879909 26879933 -139770363 + AT_rich Low_complexity Low_complexity 1 24 0 3 790 5828 130 6 27 chrX 26880069 26881036 -139769260 + Lx3A LINE L1 6028 6974 -7 3 790 231 320 62 37 chrX 26882349 26882511 -139767785 + L2 LINE L2 1494 1659 -1760 3 790 181 347 52 10 chrX 26882874 26882970 -139767326 + L2 LINE L2 1926 2025 -1394 3 790 574 320 40 15 chrX 26882984 26883191 -139767105 - B4A SINE B4 -2 290 83 3 790 228 86 0 0 chrX 26883237 26883272 -139767024 + (TGG)n Simple_repeat Simple_repeat 1 35 0 3 790 346 325 115 39 chrX 26883368 26883602 -139766694 + L2 LINE L2 2049 2300 -1119 3 790 4625 131 12 19 chrX 26883607 26884404 -139765892 + YREP_Mm Unknown Unknown 986 1777 -35 3 790 454 289 0 0 chrX 26885245 26885349 -139764947 + B3 SINE B2 98 201 -15 3 790 384 252 75 8 chrX 26885409 26885529 -139764767 + B1F SINE Alu 21 148 -1 3 790 912 237 19 0 chrX 26885675 26885882 -139764414 + B3 SINE B2 1 211 -5 3 790 624 327 97 34 chrX 26886115 26886384 -139763912 + B4A SINE B4 4 289 -3 3 790 17325 176 37 49 chrX 26886514 26889207 -139761089 + L1VL2 LINE L1 300 2807 -3076 3 790 893 127 0 0 chrX 26889207 26889341 -139760955 + B1_Mus2 SINE Alu 1 134 -13 3 790 267 93 0 0 chrX 26889351 26889394 -139760902 + (TAA)n Simple_repeat Simple_repeat 2 44 0 3 790 17325 161 20 38 chrX 26889394 26891350 -139758946 + L1VL2 LINE L1 2809 4755 -1128 3 790 5186 145 19 1 chrX 26891351 26892202 -139758094 + Lx LINE L1 5787 6652 -2 3 790 21 0 0 0 chrX 26892202 26892223 -139758073 + AT_rich Low_complexity Low_complexity 1 21 0 3 790 26 88 0 0 chrX 26892266 26892334 -139757962 + AT_rich Low_complexity Low_complexity 1 68 0 3 790 519 17 0 0 chrX 26893498 26893558 -139756738 + (TC)n Simple_repeat Simple_repeat 2 61 0 3 790 471 18 0 0 chrX 26893559 26893615 -139756681 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 790 280 259 95 69 chrX 26893935 26894051 -139756245 + B1F SINE Alu 29 147 -2 3 790 228 333 47 70 chrX 26894046 26894066 -139756230 + ID_B1 SINE B4 70 195 -29 3 790 248 292 101 28 chrX 26894066 26894175 -139756121 + B1F SINE Alu 1 117 -32 3 790 805 275 44 29 chrX 26894958 26895164 -139755132 - B3 SINE B2 -6 210 2 3 790 921 127 14 0 chrX 26895419 26895561 -139754735 - B1_Mus1 SINE Alu -1 147 4 3 790 358 264 162 10 chrX 26895562 26895760 -139754536 - B4 SINE B4 -62 230 3 3 790 21 36 0 0 chrX 26896397 26896425 -139753871 + AT_rich Low_complexity Low_complexity 1 28 0 3 790 321 322 49 8 chrX 26896673 26896795 -139753501 - B1F SINE Alu -3 146 20 3 790 25339 147 6 2 chrX 26897045 26902216 -139748080 + L1_Mus3 LINE L1 1445 6634 -4 3 790 208 147 0 0 chrX 26902647 26902681 -139747615 + (A)n Simple_repeat Simple_repeat 1 34 0 3 790 195 129 0 0 chrX 26902863 26902894 -139747402 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 790 387 0 0 0 chrX 26902896 26902939 -139747357 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 790 351 0 0 0 chrX 26902939 26902978 -139747318 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 790 264 350 20 10 chrX 26903553 26903654 -139746642 + PB1D10 SINE Alu 1 102 -15 3 790 235 352 22 11 chrX 26904558 26904647 -139745649 - B3 SINE B2 -14 202 113 3 790 213 284 0 69 chrX 26904651 26904723 -139745573 - B4A SINE B4 -139 153 87 3 790 445 305 65 13 chrX 26904732 26904885 -139745411 - B3 SINE B2 -53 163 3 3 790 441 0 0 0 chrX 26904969 26905018 -139745278 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 790 6984 103 25 17 chrX 26905138 26906928 -139743368 - L1_Mus1 LINE L1 0 6567 4778 3 790 7250 82 8 6 chrX 26906909 26908087 -139742209 - L1Md_F2 LINE L1 0 6582 5405 3 790 17709 158 11 15 chrX 26908085 26911417 -139738879 - L1_Mus1 LINE L1 -1075 4808 1492 3 790 6794 158 27 7 chrX 26911415 26912739 -139737557 - L1_Mus3 LINE L1 -690 5948 4601 3 790 607 207 9 0 chrX 26912738 26912849 -139737447 - Lx4A LINE L1 -228 6830 6719 3 790 2071 264 69 15 chrX 26913705 26914317 -139735979 - Lx2B LINE L1 -14 6986 6342 3 790 3109 156 66 13 chrX 26914314 26914474 -139735822 + L1_Mur2 LINE L1 4537 4730 -1147 3 790 188 35 35 0 chrX 26914474 26914503 -139735793 + (TAA)n Simple_repeat Simple_repeat 1 30 0 3 790 3109 156 66 13 chrX 26914503 26914952 -139735344 + L1_Mur2 LINE L1 4731 5178 -699 3 790 472 111 97 39 chrX 26915125 26915199 -139735097 - URR1B DNA MER1_type 0 225 150 3 790 216 0 0 0 chrX 26915199 26915223 -139735073 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 790 472 111 97 39 chrX 26915223 26915251 -139735045 - URR1B DNA MER1_type -76 149 117 3 790 327 252 45 0 chrX 26915625 26915752 -139734544 + RLTR1B LTR ERV1 259 454 -170 3 790 24 32 0 0 chrX 26915890 26915921 -139734375 + AT_rich Low_complexity Low_complexity 1 31 0 3 790 1856 238 7 15 chrX 26916061 26916660 -139733636 - Lx6 LINE L1 -1352 6108 5512 3 790 25751 49 150 3 chrX 26916659 26921967 -139728329 - L1Md_T LINE L1 -1 6584 335 3 790 1475 237 44 2 chrX 26921963 26922373 -139727923 - Lx6 LINE L1 -349 5531 5105 3 790 1208 217 37 9 chrX 26922378 26922704 -139727592 - Lx6 LINE L1 -2035 3845 3511 3 790 698 240 57 33 chrX 26922704 26922868 -139727428 - Lx6 LINE L1 -3397 2480 2324 3 790 513 0 0 0 chrX 26922868 26922925 -139727371 + (TC)n Simple_repeat Simple_repeat 2 58 0 3 790 698 240 57 33 chrX 26922925 26922971 -139727325 - Lx6 LINE L1 -3554 2323 2266 3 790 653 322 50 18 chrX 26922977 26923195 -139727101 - ORR1D2 LTR MaLR -145 225 1 3 790 466 393 4 0 chrX 26923197 26923431 -139726865 + Lx8 LINE L1 6956 7190 -283 3 790 956 287 47 22 chrX 26923533 26923893 -139726403 + ORR1D2 LTR MaLR 1 369 -1 3 790 488 289 7 21 chrX 26924048 26924193 -139726103 + Lx8 LINE L1 6640 6782 -691 3 790 253 244 12 25 chrX 26924435 26924515 -139725781 - Lx9 LINE L1 -1398 6246 6168 3 790 271 442 0 0 chrX 26924568 26924706 -139725590 + RMER1C Other Other 535 672 -670 3 790 308 444 6 25 chrX 26925052 26925483 -139724813 + RMER1C Other Other 412 786 -556 3 790 297 164 0 0 chrX 26925903 26925976 -139724320 + A-rich Low_complexity Low_complexity 1 73 0 3 790 244 338 13 0 chrX 26926095 26926172 -139724124 + RMER1C Other Other 599 676 -666 3 790 330 397 43 50 chrX 26927073 26927759 -139722537 + RMER1C Other Other 375 874 -468 3 790 34507 70 4 8 chrX 26927820 26932462 -139717834 - L1Md_F3 LINE L1 0 6584 1970 3 790 207 0 0 0 chrX 26932462 26932485 -139717811 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 790 34507 122 11 28 chrX 26932485 26934248 -139716048 - L1Md_F3 LINE L1 -3914 1969 233 3 790 288 0 0 0 chrX 26935452 26935484 -139714812 + (A)n Simple_repeat Simple_repeat 1 32 0 3 790 314 430 29 30 chrX 26935749 26936424 -139713872 + RMER1C Other Other 444 858 -484 3 790 608 386 41 19 chrX 26936904 26937354 -139712942 + RMER1C Other Other 412 874 -468 3 790 322 415 35 29 chrX 26937396 26937709 -139712587 + RMER1C Other Other 423 737 -605 3 790 378 0 0 0 chrX 26937821 26937863 -139712433 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 790 297 0 0 0 chrX 26937863 26937895 -139712401 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 790 451 428 31 19 chrX 26938150 26938790 -139711506 + RMER1C Other Other 378 867 -475 3 790 313 406 43 7 chrX 26938904 26939117 -139711179 + RMER1C Other Other 419 687 -655 3 790 379 419 37 48 chrX 26939739 26940282 -139710014 + RMER1C Other Other 378 837 -505 3 790 355 428 11 27 chrX 26940754 26941119 -139709177 + RMER1C Other Other 509 867 -475 3 790 386 405 26 19 chrX 26941214 26941478 -139708818 + RMER1C Other Other 464 729 -613 3 790 449 423 12 0 chrX 26941754 26942002 -139708294 + RMER1C Other Other 421 671 -671 3 790 432 378 38 23 chrX 26942097 26942648 -139707648 + RMER1C Other Other 362 865 -477 3 790 23894 43 0 0 chrX 26942718 26945833 -139704463 - L1_Mm LINE L1 -1059 4824 1710 3 790 9848 183 30 14 chrX 26945833 26948687 -139701609 - Lx4A LINE L1 -427 6631 3725 3 790 3611 180 50 5 chrX 26948699 26949731 -139700565 + Lx3C LINE L1 5353 6423 -553 3 790 931 135 0 0 chrX 26949724 26949880 -139700416 + L1_Mm LINE L1 4206 4361 -1522 3 790 1615 63 13 5 chrX 26949892 26950116 -139700180 - MT2_Mm LTR ERVL 0 493 268 3 790 24459 132 17 48 chrX 26950116 26954964 -139695332 - L1Md_F LINE L1 -145 5738 1074 3 790 2091 202 11 0 chrX 26954967 26955437 -139694859 - L1Md_F LINE L1 -5415 1201 727 3 790 424 254 16 8 chrX 26955448 26955575 -139694721 - L1Md_F LINE L1 -5814 802 675 3 790 488 294 25 109 chrX 26955606 26956084 -139694212 - L1VL1 LINE L1 -5941 477 1 3 790 876 156 62 19 chrX 26956130 26956339 -139693957 - L1_Mm LINE L1 -432 5451 5234 3 790 1077 267 82 0 chrX 26956504 26956796 -139693500 + MER2 DNA MER2_type 6 321 -24 3 790 871 273 10 0 chrX 26957216 26957421 -139692875 + B3 SINE B2 1 207 -9 3 790 294 50 0 0 chrX 26957506 26957546 -139692750 + (TTCC)n Simple_repeat Simple_repeat 2 41 0 3 790 581 276 29 68 chrX 26957614 26957820 -139692476 - B3A SINE B2 0 198 1 3 790 602 270 51 29 chrX 26958122 26958397 -139691899 + Lx7 LINE L1 5857 6137 -1559 3 790 1790 261 47 21 chrX 26958432 26959008 -139691288 + Lx7 LINE L1 6064 6654 -1042 3 790 462 148 0 0 chrX 26959272 26959360 -139690936 + RMER3D-int LTR ERVK 489 564 -2278 3 790 597 212 25 40 chrX 26959375 26959576 -139690720 + RMER3D-int LTR ERVK 652 849 -1993 3 790 469 232 65 34 chrX 26959642 26959998 -139690298 + RMER3D-int LTR ERVK 354 804 -2038 3 790 547 139 71 24 chrX 26960033 26960203 -139690093 + GA-rich Low_complexity Low_complexity 3 180 0 3 790 1523 183 165 29 chrX 26960248 26960570 -139689726 + RMER3D-int LTR ERVK 1014 1383 -1459 3 790 3205 53 2 0 chrX 26960570 26960965 -139689331 - MTA_Mm LTR MaLR 0 396 1 3 790 1523 193 13 36 chrX 26960965 26961122 -139689174 + RMER3D-int LTR ERVK 1384 1533 -1309 3 790 529 221 40 33 chrX 26961150 26961300 -139688996 + RMER3D-int LTR ERVK 1528 1678 -1164 3 790 2646 215 43 52 chrX 26961322 26962245 -139688051 + RMER3D-int LTR ERVK 1927 2841 -1 3 790 2860 96 7 2 chrX 26962246 26962665 -139687631 + BGLII LTR ERVK 1 421 0 3 790 1299 219 64 36 chrX 26962904 26963337 -139686959 - RLTR21 LTR ERVK -150 1254 706 4 790 11529 82 5 2 chrX 26963344 26965677 -139684619 - L1Md_F2 LINE L1 -19 6563 4225 4 790 12650 113 5 36 chrX 26965660 26968487 -139681809 - L1Md_F2 LINE L1 -2718 3165 217 4 790 850 154 11 51 chrX 26968490 26968668 -139681628 - RLTR21 LTR ERVK -855 717 547 4 790 246 32 0 0 chrX 26968675 26968706 -139681590 + (A)n Simple_repeat Simple_repeat 1 31 0 4 790 1436 220 22 40 chrX 26968723 26969045 -139681251 - RLTR21 LTR ERVK -1248 324 9 4 790 1591 257 21 28 chrX 26969551 26969785 -139680511 - Lx6 LINE L1 -1326 6134 5904 4 790 1993 196 32 10 chrX 26969785 26970197 -139680099 - MTC LTR MaLR 0 421 1 4 790 1591 257 21 28 chrX 26970197 26970494 -139679802 - Lx6 LINE L1 -1557 5903 5607 4 790 1006 206 25 3 chrX 26970501 26970784 -139679512 - L1_Mur3 LINE L1 -2593 3287 2999 4 790 3691 144 21 24 chrX 26970785 26971315 -139678981 - L1_Mus3 LINE L1 -8 6630 6101 4 790 2724 70 0 0 chrX 26971315 26971657 -139678639 - ORR1A1 LTR MaLR -4 342 1 4 790 3691 144 21 24 chrX 26971657 26971781 -139678515 - L1_Mus3 LINE L1 -538 6100 5978 4 790 4260 63 44 4 chrX 26971781 26972553 -139677743 + L1Md_F2 LINE L1 5273 6062 -520 4 790 324 78 15 15 chrX 26972553 26972618 -139677678 + L1Md_F2 LINE L1 6515 6579 -3 4 790 1094 318 7 31 chrX 26972618 26973040 -139677256 - RodERV21-int LTR ERV1 -3327 1664 1253 4 790 7985 14 0 0 chrX 26974216 26975170 -139675126 + L1Md_A LINE L1 4633 5586 -297 4 790 8736 17 0 0 chrX 26975170 26976161 -139674135 + L1Md_A LINE L1 5587 6577 -5 4 790 729 61 0 115 chrX 26976186 26976316 -139673980 - RLTRETN_Mm LTR ERVK -207 115 1 4 790 6548 197 43 29 chrX 26976316 26977822 -139672474 - RLTR14-int LTR ERV1 -596 4721 3195 4 790 1146 175 187 45 chrX 26977822 26978180 -139672116 + RLTR9E LTR ERVK 1 409 0 4 790 671 230 17 69 chrX 26978182 26978505 -139671791 + MMETn-int LTR ERVK 2 372 -2942 4 790 256 182 0 18 chrX 26978500 26978556 -139671740 + MMETn-int LTR ERVK 2091 2145 -5099 4 790 1830 161 65 14 chrX 26979075 26979492 -139670804 + ETnERV2-int LTR ERVK 1648 2085 -5321 4 790 2536 182 34 30 chrX 26979516 26980170 -139670126 + ETnERV2-int LTR ERVK 1934 3123 -4283 4 790 31480 85 2 2 chrX 26980171 26985650 -139664646 - L1Md_F2 LINE L1 -14 6568 1105 4 790 32999 80 2 13 chrX 26985641 26991780 -139658516 - L1Md_F2 LINE L1 0 6582 519 4 790 6441 93 4 6 chrX 26991781 26992714 -139657582 - L1Md_F LINE L1 -5494 1025 95 4 790 637 255 35 143 chrX 26992778 26992871 -139657425 + MMETn-int LTR ERVK 5040 5120 -2124 4 790 4802 63 0 7 chrX 26992871 26993480 -139656816 + L1Md_F2 LINE L1 5966 6570 -12 4 790 2847 183 15 43 chrX 26993480 26994422 -139655874 + MMETn-int LTR ERVK 2541 3719 -1125 4 790 726 195 0 0 chrX 26994417 26994540 -139655756 + MMETn-int LTR ERVK 6539 6661 -745 4 790 3094 205 51 16 chrX 26994570 26995309 -139654987 - RLTR14-int LTR ERV1 -2117 3200 2436 4 790 1874 229 56 31 chrX 26996764 26997286 -139653010 + RLTR40 LTR ERVK 22 556 -261 4 790 515 154 8 0 chrX 26997288 26997405 -139652891 + GA-rich Low_complexity Low_complexity 2 119 0 4 790 636 280 52 44 chrX 26997405 26997592 -139652704 + RLTR40 LTR ERVK 566 752 -65 4 790 6177 91 34 2 chrX 26997592 26998006 -139652290 - RLTR13B1 LTR ERVK 0 893 476 4 790 396 0 0 0 chrX 26998006 26998050 -139652246 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 790 6177 91 34 2 chrX 26998050 26998501 -139651795 - RLTR13B1 LTR ERVK -418 475 3 4 790 636 280 52 44 chrX 26998501 26998563 -139651733 + RLTR40 LTR ERVK 753 817 0 4 790 275 0 0 28 chrX 26998754 26998790 -139651506 + (TAA)n Simple_repeat Simple_repeat 2 36 0 4 790 681 232 57 10 chrX 27000320 27000512 -139649784 - Lx9 LINE L1 -243 7401 7201 1 790 398 191 0 0 chrX 27000512 27000596 -139649700 + Lx9 LINE L1 7554 7637 -7 2 790 473 287 13 0 chrX 27000605 27000755 -139649541 + Lx5 LINE L1 6825 6976 -74 3 790 393 22 0 0 chrX 27000763 27000809 -139649487 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 4 98 597 231 35 14 chrX 27000821 27000966 -139649330 + B1_Mur2 SINE Alu 1 148 -1 5 791 1977 148 27 0 chrX 27000995 27001333 -139648963 + L1_Mus3 LINE L1 6284 6630 -8 6 791 28 48 0 0 chrX 27001346 27001388 -139648908 + AT_rich Low_complexity Low_complexity 1 42 0 7 791 691 238 7 12 chrX 27001515 27001700 -139648596 + Lx4B LINE L1 6809 6994 -64 8 791 2685 179 32 2 chrX 27001762 27002354 -139647942 - L1_Mur2 LINE L1 -1176 4701 4092 9 791 10101 145 31 24 chrX 27002354 27003723 -139646573 - RLTR22_Mur LTR ERVK 0 1848 461 1 791 403 60 0 29 chrX 27003723 27003792 -139646504 + (TAG)n Simple_repeat Simple_repeat 3 69 0 1 791 10101 145 31 24 chrX 27003792 27004257 -139646039 - RLTR22_Mur LTR ERVK -1388 460 1 1 791 805 153 199 0 chrX 27004257 27004498 -139645798 - L1_Mur2 LINE L1 -1782 4095 3807 9 791 1387 133 25 4 chrX 27004542 27004783 -139645513 + L1_Mus4 LINE L1 6391 6636 0 1 791 180 0 0 0 chrX 27005272 27005292 -139645004 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 1 791 24 0 0 0 chrX 27006685 27006709 -139643587 + AT_rich Low_complexity Low_complexity 1 24 0 1 791 367 261 22 7 chrX 27006994 27007129 -139643167 + L1_Mur2 LINE L1 4334 4470 -1407 1 791 747 331 42 19 chrX 27007134 27007569 -139642727 + Lx6 LINE L1 6506 7296 -164 1 791 1303 204 20 92 chrX 27007552 27008000 -139642296 - L1_Mur2 LINE L1 -2142 3735 3320 1 791 1156 76 0 0 chrX 27008002 27008160 -139642136 - L1_Mus1 LINE L1 0 6567 6410 1 791 20357 130 6 6 chrX 27008163 27012006 -139638290 - L1_Mus1 LINE L1 -434 6133 2294 1 791 459 207 11 0 chrX 27012007 27012094 -139638202 + L1VL1 LINE L1 195 282 -6140 1 791 29948 53 1 4 chrX 27012089 27016119 -139634177 + L1Md_F2 LINE L1 1568 5585 -298 2 791 7663 63 9 0 chrX 27016120 27017095 -139633201 + L1Md_F2 LINE L1 5587 6570 -12 2 791 1324 203 75 44 chrX 27017095 27017524 -139632772 + RLTR21 LTR ERVK 706 1251 -153 2 791 2679 104 19 2 chrX 27017765 27018179 -139632117 - BGLII LTR ERVK 0 421 1 2 791 2620 202 117 14 chrX 27018179 27019103 -139631193 - MYSERV16_I-int LTR ERVK 0 2326 1308 2 791 529 221 40 33 chrX 27019125 27019275 -139631021 - RMER3D-int LTR ERVK -1164 1678 1528 2 791 816 154 0 20 chrX 27019303 27019455 -139630841 - RMER3D-int LTR ERVK -1309 1533 1385 2 791 3909 5 0 7 chrX 27019496 27019935 -139630361 + L1Md_T LINE L1 6146 6581 -1 2 791 22439 133 17 73 chrX 27020081 27024176 -139626120 + L1_Mm LINE L1 1408 5234 -649 2 791 180 0 0 0 chrX 27024176 27024196 -139626100 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 791 22439 133 17 73 chrX 27024196 27024688 -139625608 + L1_Mm LINE L1 5235 5737 -146 2 791 1615 63 13 5 chrX 27024688 27024912 -139625384 + MT2_Mm LTR ERVL 268 493 0 2 791 957 128 0 0 chrX 27024924 27025080 -139625216 - L1_Mm LINE L1 -1522 4361 4206 2 791 932 171 123 9 chrX 27025073 27025292 -139625004 - Lx3C LINE L1 -553 6423 6180 2 791 2782 36 6 173 chrX 27025310 27025778 -139624518 - RLTR10 LTR ERVK 0 390 1 3 791 8295 16 6 1 chrX 27025780 27026768 -139623528 - RLTR10-int LTR ERVK -3 1984 992 3 791 7761 38 1 10 chrX 27026846 27027828 -139622468 - RLTR10-int LTR ERVK -999 988 16 3 791 2772 36 6 177 chrX 27027863 27028333 -139621963 - RLTR10 LTR ERVK 0 390 1 3 791 2799 170 33 1 chrX 27028337 27029133 -139621163 - Lx3C LINE L1 -809 6167 5353 2 791 7531 214 52 9 chrX 27029145 27032058 -139618238 + Lx4B LINE L1 3734 6782 -276 3 791 319 367 71 12 chrX 27032319 27032559 -139617737 - RMER1C Other Other -494 848 595 3 791 226 184 0 58 chrX 27032764 27032816 -139617480 - RMER2 LTR ERV1 -234 333 285 3 791 390 419 12 0 chrX 27033033 27033281 -139617015 - RMER1C Other Other -671 671 421 3 791 284 409 26 19 chrX 27033559 27033823 -139616473 - RMER1C Other Other -613 729 464 3 791 273 425 12 32 chrX 27033939 27034284 -139616012 - RMER1C Other Other -496 846 509 3 791 288 390 17 50 chrX 27034920 27035101 -139615195 - RMER1C Other Other -691 651 383 3 791 256 433 18 14 chrX 27036474 27036753 -139613543 - RMER1C Other Other -478 864 585 3 791 405 0 0 0 chrX 27037141 27037186 -139613110 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 791 254 328 36 29 chrX 27037302 27037440 -139612856 - RMER1C Other Other -753 589 451 3 791 412 403 41 19 chrX 27037657 27038107 -139612189 - RMER1C Other Other -468 874 412 4 791 293 418 24 18 chrX 27038621 27038957 -139611339 - RMER1C Other Other -518 824 487 4 791 294 29 0 0 chrX 27039545 27039580 -139610716 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 4 791 30881 87 4 16 chrX 27040787 27046206 -139604090 + L1Md_F3 LINE L1 233 5586 -297 4 791 7680 68 6 0 chrX 27046206 27047198 -139603098 + L1Md_F3 LINE L1 5587 6584 0 4 791 392 65 25 25 chrX 27049041 27049120 -139601176 + (TTTTG)n Simple_repeat Simple_repeat 3 81 0 4 791 266 380 0 0 chrX 27049879 27050000 -139600296 - RMER1C Other Other -685 657 537 4 791 458 256 8 23 chrX 27050850 27050982 -139599314 - Lx8 LINE L1 -704 6769 6640 4 791 887 287 35 35 chrX 27051137 27051505 -139598791 - ORR1D2 LTR MaLR -2 368 1 4 791 422 389 4 0 chrX 27051609 27051843 -139598453 - Lx8 LINE L1 -283 7190 6956 4 791 616 332 47 14 chrX 27051845 27052056 -139598240 + ORR1D2 LTR MaLR 1 218 -152 4 791 593 267 47 24 chrX 27052069 27052117 -139598179 + Lx6 LINE L1 2265 2322 -3555 5 791 585 0 0 0 chrX 27052117 27052182 -139598114 + (GA)n Simple_repeat Simple_repeat 2 66 0 5 791 593 267 47 24 chrX 27052182 27052344 -139597952 + Lx6 LINE L1 2323 2479 -3398 5 791 1091 221 40 12 chrX 27052344 27052670 -139597626 + Lx6 LINE L1 3510 3844 -2033 5 791 2815 244 21 10 chrX 27052675 27053665 -139596631 + Lx6 LINE L1 5105 6108 -1352 5 791 347 284 71 47 chrX 27053974 27054144 -139596152 - RLTR1B LTR ERV1 -173 339 166 5 791 433 148 78 19 chrX 27054477 27054505 -139595791 + URR1B DNA MER1_type 117 144 -81 5 791 468 0 0 0 chrX 27054505 27054557 -139595739 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 791 433 148 78 19 chrX 27054557 27054631 -139595665 + URR1B DNA MER1_type 145 224 -1 5 791 2930 156 66 13 chrX 27054804 27055253 -139595043 - L1_Mur2 LINE L1 -699 5178 4731 5 791 216 0 0 0 chrX 27055253 27055277 -139595019 + (TTA)n Simple_repeat Simple_repeat 1 24 0 5 791 2930 156 66 13 chrX 27055277 27055437 -139594859 - L1_Mur2 LINE L1 -1147 4730 4537 5 791 2046 257 68 3 chrX 27055434 27056040 -139594256 + Lx2B LINE L1 6342 6986 -14 5 791 589 189 9 0 chrX 27056893 27057004 -139593292 + Lx4A LINE L1 6719 6830 -228 5 791 6373 158 27 12 chrX 27057003 27058336 -139591960 + L1_Mus3 LINE L1 4601 5948 -690 5 791 22384 146 14 53 chrX 27058334 27061838 -139588458 + L1_Mus1 LINE L1 1492 4795 -1088 6 791 7226 80 5 14 chrX 27061838 27062842 -139587454 + L1Md_F2 LINE L1 5588 6582 0 6 791 22384 118 21 32 chrX 27062842 27064601 -139585695 + L1_Mus1 LINE L1 4796 6567 0 6 791 261 0 0 0 chrX 27064721 27064750 -139585546 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 791 1797 141 254 31 chrX 27064839 27065287 -139585009 - RLTR6_Mm LTR ERV1 -70 584 37 6 791 60237 36 23 1 chrX 27065400 27073014 -139577282 - RLTR6-int LTR ERV1 0 7778 2 6 791 1854 146 244 30 chrX 27073016 27073483 -139576813 - RLTR6_Mm LTR ERV1 -51 603 37 6 791 481 293 66 13 chrX 27073597 27073749 -139576547 + B3 SINE B2 4 163 -53 6 791 233 278 0 65 chrX 27073753 27073830 -139576466 + B4A SINE B4 82 153 -139 6 791 246 352 22 11 chrX 27073834 27073923 -139576373 + B3 SINE B2 113 202 -14 6 791 247 357 20 10 chrX 27074827 27074926 -139575370 - PB1D10 SINE Alu -15 102 3 6 791 266 294 15 0 chrX 27074864 27074932 -139575364 - B4A SINE B4 -142 150 82 6 791 432 143 0 0 chrX 27075503 27075514 -139574782 + (CATATA)n Simple_repeat Simple_repeat 4 14 0 7 791 204 40 0 0 chrX 27075514 27075539 -139574757 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 791 432 143 0 0 chrX 27075539 27075604 -139574692 + (CATATA)n Simple_repeat Simple_repeat 3 67 0 7 791 201 162 0 0 chrX 27075768 27075805 -139574491 + T-rich Low_complexity Low_complexity 2 38 0 7 791 23985 145 5 1 chrX 27076237 27081408 -139568888 - L1_Mus3 LINE L1 -4 6634 1445 7 791 267 355 49 8 chrX 27081659 27081781 -139568515 + B1F SINE Alu 20 146 -3 7 791 213 296 0 0 chrX 27082085 27082129 -139568167 - ID4 SINE ID -36 47 4 7 791 230 310 127 0 chrX 27082362 27082433 -139567863 + ID4 SINE ID 4 83 0 7 791 371 251 160 10 chrX 27082699 27082899 -139567397 + B4 SINE B4 1 230 -62 7 791 1052 91 7 0 chrX 27082900 27083043 -139567253 + B1_Mus1 SINE Alu 4 147 -1 7 791 864 291 14 24 chrX 27083300 27083511 -139566785 + B3 SINE B2 2 210 -6 8 791 256 292 101 28 chrX 27084294 27084403 -139565893 - B1F SINE Alu -32 117 1 8 791 235 333 47 70 chrX 27084403 27084423 -139565873 - ID_B1 SINE B4 -29 195 70 8 791 260 278 134 60 chrX 27084418 27084552 -139565744 - B1F SINE Alu -2 147 4 8 791 24 0 0 0 chrX 27084552 27084576 -139565720 + AT_rich Low_complexity Low_complexity 1 24 0 8 791 285 29 0 0 chrX 27084854 27084888 -139565408 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 791 465 19 0 0 chrX 27084889 27084943 -139565353 + (GA)n Simple_repeat Simple_repeat 2 55 0 8 791 5263 140 19 1 chrX 27086239 27087090 -139563206 - Lx LINE L1 -2 6652 5787 8 791 16180 160 20 41 chrX 27087091 27089029 -139561267 - L1VL2 LINE L1 -1127 4756 2824 8 791 423 0 0 0 chrX 27089029 27089076 -139561220 + (TA)n Simple_repeat Simple_repeat 2 48 0 8 791 16180 160 20 41 chrX 27089076 27089093 -139561203 - L1VL2 LINE L1 -3060 2823 2819 8 791 309 109 0 0 chrX 27089093 27089139 -139561157 + (TTA)n Simple_repeat Simple_repeat 2 47 0 9 791 955 119 0 0 chrX 27089149 27089283 -139561013 - B1_Mus2 SINE Alu -13 134 1 9 791 16180 177 33 52 chrX 27089283 27091981 -139558315 - L1VL2 LINE L1 -3075 2808 300 8 791 22 56 0 0 chrX 27092074 27092110 -139558186 + AT_rich Low_complexity Low_complexity 1 36 0 9 791 647 323 97 34 chrX 27092119 27092388 -139557908 - B4A SINE B4 -3 289 4 9 791 966 227 19 0 chrX 27092621 27092828 -139557468 - B3 SINE B2 -5 211 1 9 791 365 261 75 8 chrX 27092974 27093094 -139557202 - B1F SINE Alu -1 148 21 9 791 456 289 0 0 chrX 27093154 27093258 -139557038 - B3 SINE B2 -15 201 98 9 791 4600 132 15 18 chrX 27094099 27094893 -139555403 - YREP_Mm Unknown Unknown -35 1777 986 9 791 331 341 111 34 chrX 27094898 27095132 -139555164 - L2 LINE L2 -1119 2300 2049 9 791 207 114 0 0 chrX 27095228 27095263 -139555033 + (CCA)n Simple_repeat Simple_repeat 1 35 0 9 791 549 338 39 7 chrX 27095361 27095516 -139554780 + B4A SINE B4 131 290 -2 1 791 205 364 30 23 chrX 27095787 27095919 -139554377 - L2 LINE L2 -1769 1650 1518 9 791 5142 125 78 32 chrX 27097257 27098184 -139552112 - Lx3A LINE L1 -7 6974 6006 1 791 305 307 56 70 chrX 27098625 27098909 -139551387 + RMER17C LTR ERVK 83 362 -48 1 791 36595 8 0 0 chrX 27099063 27104643 -139545653 + L1Md_A LINE L1 7 5586 -297 1 791 9014 3 1 0 chrX 27104643 27105638 -139544658 + L1Md_A LINE L1 5587 6582 0 1 791 812 120 35 21 chrX 27105808 27105953 -139544343 + L1_Mus1 LINE L1 6421 6567 0 1 791 3600 77 8 30 chrX 27105957 27106784 -139543512 - L1Md_A LINE L1 -4124 1759 964 1 791 29480 82 5 41 chrX 27106785 27109887 -139540409 - L1Md_F2 LINE L1 -12 6570 3464 1 791 1136 90 73 0 chrX 27109887 27110065 -139540231 - B2_Mm2 SINE B2 0 195 5 1 791 29480 108 16 49 chrX 27110065 27113498 -139536798 - L1Md_F2 LINE L1 -2420 3463 273 1 791 1361 183 52 0 chrX 27113496 27113747 -139536549 - L1VL1 LINE L1 -6156 266 3 1 791 13855 141 7 0 chrX 27113735 27114586 -139535710 + L1_Mus1 LINE L1 2281 3132 -2751 1 791 210 37 0 0 chrX 27114586 27114613 -139535683 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 791 13855 141 7 0 chrX 27114613 27116021 -139534275 + L1_Mus1 LINE L1 3133 4553 -1330 1 791 2461 18 7 337 chrX 27116021 27116603 -139533693 + RLTR10 LTR ERVK 1 390 0 1 791 277 160 92 13 chrX 27116603 27116679 -139533617 + RLTR10-int LTR ERVK 1 82 -1905 1 791 17125 23 16 0 chrX 27116688 27118631 -139531665 + RLTR10-int LTR ERVK 11 1984 -3 1 791 2741 31 2 274 chrX 27118633 27119169 -139531127 + RLTR10 LTR ERVK 1 390 0 1 791 8636 112 6 5 chrX 27119169 27120738 -139529558 + L1_Mus1 LINE L1 4549 6118 -449 1 791 1243 109 17 0 chrX 27120739 27120914 -139529382 + L1_Mus1 LINE L1 6390 6567 0 1 791 1622 194 20 83 chrX 27120916 27121360 -139528936 + L1_Mur2 LINE L1 3320 3735 -2142 1 791 816 315 49 31 chrX 27121344 27121777 -139528519 - Lx6 LINE L1 -165 7295 6506 1 791 338 276 22 7 chrX 27121782 27121917 -139528379 - L1_Mur2 LINE L1 -1407 4470 4334 1 791 24 0 0 0 chrX 27122201 27122225 -139528071 + AT_rich Low_complexity Low_complexity 1 24 0 1 791 180 0 0 0 chrX 27123616 27123636 -139526660 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 1 791 11943 34 0 0 chrX 27124004 27126058 -139524238 - L1Md_T LINE L1 0 6582 4529 1 791 1402 143 30 0 chrX 27126090 27126321 -139523975 - L1_Mus4 LINE L1 0 6636 6399 1 791 1269 199 17 14 chrX 27126372 27126662 -139523634 + L1_Mur2 LINE L1 3805 4095 -1782 1 791 9946 142 39 25 chrX 27126662 27127109 -139523187 + RLTR22_Mur LTR ERVK 1 444 -1404 1 791 724 72 0 18 chrX 27127109 27127223 -139523073 + (CTA)n Simple_repeat Simple_repeat 3 114 0 1 791 9946 142 39 25 chrX 27127223 27128598 -139521698 + RLTR22_Mur LTR ERVK 445 1847 -1 1 791 2979 175 37 2 chrX 27128598 27129187 -139521109 + L1_Mur2 LINE L1 4092 4701 -1176 1 791 775 256 19 14 chrX 27129223 27129437 -139520859 - Lx4B LINE L1 -35 7023 6809 1 791 227 263 0 0 chrX 27129446 27129503 -139520793 + T-rich Low_complexity Low_complexity 4 60 0 1 791 26 50 0 0 chrX 27129569 27129609 -139520687 + AT_rich Low_complexity Low_complexity 1 40 0 1 791 2066 159 45 0 chrX 27129621 27129974 -139520322 - L1_Mus3 LINE L1 -8 6630 6262 1 791 717 208 34 14 chrX 27130001 27130147 -139520149 - B1_Mur3 SINE Alu 0 149 1 1 791 279 0 0 0 chrX 27130162 27130193 -139520103 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1 791 530 287 13 0 chrX 27130201 27130351 -139519945 - Lx5 LINE L1 -74 6976 6825 1 791 409 220 0 0 chrX 27130355 27130446 -139519850 - Lx9 LINE L1 -2 7642 7552 1 791 720 237 57 10 chrX 27130444 27130636 -139519660 + Lx9 LINE L1 7201 7401 -243 1 791 198 0 0 0 chrX 27131823 27131845 -139518451 + (T)n Simple_repeat Simple_repeat 1 22 0 1 98 1347 27 0 0 chrX 27131845 27131992 -139518304 - B1_Mus2 SINE Alu 0 147 1 1 792 234 0 0 0 chrX 27132382 27132408 -139517888 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1 792 490 256 56 66 chrX 27132606 27132661 -139517635 - RLTR40 LTR ERVK -8 809 753 1 792 6690 95 24 5 chrX 27132661 27133537 -139516759 + RLTR13B1 LTR ERVK 1 893 0 1 792 490 256 56 66 chrX 27133537 27133678 -139516618 - RLTR40 LTR ERVK -65 752 615 1 792 548 143 9 0 chrX 27133692 27133804 -139516492 + CT-rich Low_complexity Low_complexity 2 114 0 1 792 1810 215 63 44 chrX 27133804 27134329 -139515967 - RLTR40 LTR ERVK -261 556 22 1 792 3486 206 44 17 chrX 27135770 27136517 -139513779 + RLTR14-int LTR ERV1 2434 3200 -2117 1 792 743 211 0 0 chrX 27136548 27136671 -139513625 - MMETn-int LTR ERVK -745 6661 6539 1 792 3204 170 13 41 chrX 27136666 27137585 -139512711 - MMETn-int LTR ERVK -1703 3141 2541 1 792 266 35 103 0 chrX 27137585 27137643 -139512653 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 1 792 5183 55 0 7 chrX 27137655 27138264 -139512032 - L1Md_F2 LINE L1 -12 6570 5966 1 792 422 173 40 10 chrX 27138264 27138360 -139511936 - MMETn-int LTR ERVK -2291 2553 2473 1 792 2189 89 28 16 chrX 27138433 27138751 -139511545 - RLTRETN_Mm LTR ERVK 0 322 1 1 792 25840 33 14 9 chrX 27138751 27143636 -139506660 - MMETn-int LTR ERVK 0 4844 1 1 792 2189 89 28 16 chrX 27143636 27143954 -139506342 - RLTRETN_Mm LTR ERVK 0 322 1 1 792 6976 89 1 6 chrX 27143954 27144888 -139505408 + L1Md_F LINE L1 97 1025 -5494 1 792 31725 98 5 23 chrX 27144889 27150265 -139500031 + L1Md_F2 LINE L1 315 5587 -296 1 792 8355 51 2 5 chrX 27150266 27151251 -139499045 + L1Md_F2 LINE L1 5589 6570 -12 1 792 1050 210 155 16 chrX 27151277 27151587 -139498709 - ETnERV2-int LTR ERVK -2295 4949 4597 1 792 3858 132 47 3 chrX 27151573 27152194 -139498102 - ETnERV2-int LTR ERVK -3318 4088 3441 1 792 841 142 6 105 chrX 27152419 27152600 -139497696 - MMETn-int LTR ERVK -2654 2190 2028 1 792 581 98 0 0 chrX 27152600 27152674 -139497622 + L1_Mm LINE L1 5513 5615 -2170 1 792 8093 69 1 10 chrX 27152674 27153665 -139496631 + L1Md_F2 LINE L1 5587 6568 -14 1 792 298 286 21 21 chrX 27153665 27153683 -139496613 + L1_Mm LINE L1 5616 5633 -2152 1 792 2902 187 40 28 chrX 27153687 27154320 -139495976 - ETnERV2-int LTR ERVK -4271 3135 2496 1 792 1945 179 64 12 chrX 27154341 27154760 -139495536 - ETnERV2-int LTR ERVK -5318 2088 1648 1 792 789 11 0 0 chrX 27154767 27154857 -139495439 + (GAA)n Simple_repeat Simple_repeat 2 91 0 1 792 292 167 0 0 chrX 27154860 27154914 -139495382 - RMER16-int LTR ERVK -5212 194 141 1 792 346 146 0 18 chrX 27155349 27155405 -139494891 - ETnERV2-int LTR ERVK -6278 1128 1074 1 792 765 252 12 104 chrX 27155395 27155723 -139494573 - ETnERV2-int LTR ERVK -4545 299 2 1 792 1240 175 187 45 chrX 27155725 27156083 -139494213 - RLTR9E LTR ERVK 0 409 1 1 792 8820 191 105 27 chrX 27156083 27158048 -139492248 + RLTR14-int LTR ERV1 3195 5312 -5 1 792 1638 196 12 21 chrX 27158073 27158401 -139491895 + RLTR14 LTR ERV1 7 331 -51 1 792 1532 137 0 0 chrX 27158401 27158627 -139491669 - L1_Mus3 LINE L1 -185 5698 5473 1 792 4526 108 24 0 chrX 27158629 27159293 -139491003 + L1_Mus3 LINE L1 5712 6391 -247 1 792 1348 284 14 49 chrX 27159298 27159728 -139490568 + RodERV21-int LTR ERV1 2304 2718 -2273 1 792 498 347 27 42 chrX 27159853 27160331 -139489965 + RodERV21-int LTR ERV1 3586 4056 -3035 1 792 305 24 24 0 chrX 27160491 27160533 -139489763 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 792 675 227 96 29 chrX 27161198 27161407 -139488889 + LTRIS4 LTR ERV1 285 507 0 1 792 667 244 51 79 chrX 27161409 27161960 -139488336 + MuRRS4-int LTR ERV1 5 498 -4565 1 792 1223 236 66 22 chrX 27162295 27162615 -139487681 + MuRRS4-int LTR ERV1 342 675 -4388 1 792 4338 130 25 9 chrX 27162644 27163329 -139486967 + RMER16-int LTR ERVK 666 1361 -4045 1 792 337 172 80 34 chrX 27163416 27163534 -139486762 + RMER16-int LTR ERVK 1386 1448 -3958 1 792 622 145 92 17 chrX 27163518 27163637 -139486659 + MuRRS4-int LTR ERV1 750 877 -4186 1 792 695 270 16 78 chrX 27163637 27163894 -139486402 - LSU-rRNA_Hsa rRNA rRNA -1371 3664 3424 1 792 1471 272 33 7 chrX 27164043 27164465 -139485831 + MuRRS4-int LTR ERV1 1012 1444 -3619 1 792 5243 157 63 24 chrX 27164487 27166794 -139483502 + MuRRS4-int LTR ERV1 1104 4271 -792 1 792 755 196 0 7 chrX 27166785 27166934 -139483362 + MuRRS4-int LTR ERV1 4788 4935 -128 1 792 1179 273 3 7 chrX 27166934 27167244 -139483052 + MuRRS4-int LTR ERV1 4637 4945 -118 1 792 3671 62 20 12 chrX 27167718 27168210 -139482086 - LTRIS2 LTR ERV1 0 564 69 1 792 982 167 54 25 chrX 27168210 27168450 -139481846 - RLTR1B-int LTR ERV1 -26 5037 4791 1 792 1048 157 53 0 chrX 27168676 27168937 -139481359 - RLTR1B-int LTR ERV1 -486 2813 2669 1 792 4833 83 156 91 chrX 27168924 27170166 -139480130 - RLTR1B-int LTR ERV1 -744 2555 1256 1 792 183 42 0 0 chrX 27170166 27170190 -139480106 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 792 2436 201 117 41 chrX 27170190 27171082 -139479214 - RLTR1B-int LTR ERV1 -3270 1793 835 1 792 3832 150 52 18 chrX 27171086 27171791 -139478505 - RMER16-int LTR ERVK -3988 1418 690 1 792 833 137 90 17 chrX 27171777 27171955 -139478341 - RMER16-int LTR ERVK -5075 331 141 1 792 682 75 0 0 chrX 27172299 27172392 -139477904 - RLTR1B-int LTR ERV1 -3006 293 201 1 792 3555 74 20 16 chrX 27172619 27173113 -139477183 - LTRIS2 LTR ERV1 0 564 69 1 792 3006 324 37 44 chrX 27173228 27174837 -139475459 + RodERV21-int LTR ERV1 2905 4500 -491 1 792 2446 123 35 54 chrX 27174837 27175265 -139475031 + RLTR9B2 LTR ERVK 1 420 0 1 792 3006 324 37 44 chrX 27175265 27175556 -139474740 + RodERV21-int LTR ERV1 4501 4793 -198 1 792 272 250 30 30 chrX 27175624 27175723 -139474573 + RMER17C-int LTR ERVK 3138 3236 -2 1 792 850 145 13 46 chrX 27175967 27176119 -139474177 + B1_Mus1 SINE Alu 2 148 0 1 792 226 196 107 10 chrX 27176262 27176365 -139473931 + L1_Rod LINE L1 5260 5372 -475 1 792 2243 214 65 29 chrX 27176365 27176919 -139473377 - RLTR31A_Mm LTR ERVK 0 584 11 1 792 395 230 28 43 chrX 27176938 27177079 -139473217 + L1_Rod LINE L1 5396 5534 -313 1 792 209 169 49 33 chrX 27177244 27177305 -139472991 + CT-rich Low_complexity Low_complexity 2 63 0 1 792 292 268 59 66 chrX 27178344 27178480 -139471816 + RodERV21-int LTR ERV1 893 1027 -3964 1 792 1212 309 37 43 chrX 27178624 27179164 -139471132 + RodERV21-int LTR ERV1 1116 1652 -3339 1 792 6833 73 6 8 chrX 27179176 27180491 -139469805 - L1Md_F2 LINE L1 -2 6580 5274 1 792 3565 153 18 23 chrX 27180492 27180616 -139469680 + L1_Mus3 LINE L1 5978 6100 -538 1 792 2711 67 0 3 chrX 27180616 27180959 -139469337 + ORR1A1 LTR MaLR 1 342 -4 1 792 3565 153 18 23 chrX 27180959 27181490 -139468806 + L1_Mus3 LINE L1 6101 6630 -8 1 792 1004 206 28 3 chrX 27181491 27181773 -139468523 + L1_Mur3 LINE L1 2999 3287 -2593 1 792 1191 218 14 21 chrX 27181788 27182078 -139468218 + Lx7 LINE L1 5617 5904 -1792 1 792 2085 204 17 15 chrX 27182088 27182497 -139467799 + MTC LTR MaLR 12 421 0 1 792 400 317 26 18 chrX 27182503 27182731 -139467565 + Lx6 LINE L1 5905 6134 -1326 1 792 233 307 0 17 chrX 27182731 27182847 -139467449 + Lx6 LINE L1 7332 7445 -15 1 792 1447 218 24 42 chrX 27183243 27183573 -139466723 + RLTR21 LTR ERVK 1 324 -1248 1 792 198 0 0 0 chrX 27183590 27183612 -139466684 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1 792 692 184 17 51 chrX 27183620 27183797 -139466499 + RLTR21 LTR ERVK 547 717 -855 1 792 14481 134 211 17 chrX 27183800 27185343 -139464953 + L1Md_F2 LINE L1 446 1958 -3925 1 792 211 71 48 0 chrX 27185343 27185385 -139464911 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 792 14481 79 421 2 chrX 27185385 27187723 -139462573 + L1Md_F2 LINE L1 1959 5586 -297 1 792 7314 77 9 1 chrX 27187723 27188699 -139461597 + L1Md_F2 LINE L1 5587 6570 -12 1 792 1274 214 70 52 chrX 27188699 27189099 -139461197 + RLTR21 LTR ERVK 706 1112 -460 1 792 2824 98 7 7 chrX 27189369 27189790 -139460506 - BGLII LTR ERVK 0 421 1 1 792 2464 213 116 9 chrX 27189790 27190710 -139459586 - MYSERV16_I-int LTR ERVK 0 2326 1308 1 792 2141 195 87 78 chrX 27190733 27191068 -139459228 - RMER3D-int LTR ERVK -1164 1678 1384 1 792 3338 38 2 0 chrX 27191068 27191463 -139458833 + MTA_Mm LTR MaLR 1 396 0 1 792 2141 195 87 78 chrX 27191463 27191784 -139458512 - RMER3D-int LTR ERVK -1459 1383 1016 1 792 503 184 0 63 chrX 27191831 27192022 -139458274 + CT-rich Low_complexity Low_complexity 2 180 0 1 792 547 229 29 40 chrX 27192040 27192333 -139457963 - RMER3D-int LTR ERVK -2038 804 354 1 792 494 225 35 40 chrX 27192419 27192618 -139457678 - RMER3D-int LTR ERVK -1993 849 652 1 792 478 133 0 0 chrX 27192633 27192721 -139457575 - RMER3D-int LTR ERVK -2278 564 489 1 792 1810 267 49 20 chrX 27192985 27193574 -139456722 - Lx7 LINE L1 -1042 6654 6049 1 792 604 265 49 35 chrX 27193582 27193867 -139456429 - Lx7 LINE L1 -1551 6145 5857 1 792 653 297 29 68 chrX 27194169 27194375 -139455921 + B3A SINE B2 1 198 0 1 792 381 43 0 0 chrX 27194444 27194491 -139455805 + (GGAA)n Simple_repeat Simple_repeat 4 50 0 1 792 809 283 10 0 chrX 27194575 27194780 -139455516 - B3 SINE B2 -9 207 1 1 792 742 177 69 16 chrX 27194923 27195112 -139455184 + L1_Mm LINE L1 5252 5450 -433 1 792 509 289 15 116 chrX 27195149 27195607 -139454689 + L1_Mus1 LINE L1 264 608 -6030 1 792 464 259 21 7 chrX 27195662 27195806 -139454490 + L1Md_F LINE L1 573 718 -5801 1 792 1884 201 28 4 chrX 27195803 27196273 -139454023 + L1Md_F LINE L1 628 1108 -5411 1 792 15983 194 11 59 chrX 27196270 27202099 -139448197 + L1_Mus1 LINE L1 1071 6567 0 1 792 1439 201 16 3 chrX 27202112 27202426 -139447870 + Lx2 LINE L1 5823 6140 -857 1 792 3171 177 48 9 chrX 27202428 27203361 -139446935 - Lx3C LINE L1 -660 6316 5353 2 792 9711 183 33 10 chrX 27203373 27206352 -139443944 + Lx4A LINE L1 3725 6779 -279 2 792 347 387 47 29 chrX 27206617 27207223 -139443073 - RMER1C Other Other -458 884 374 2 792 295 424 43 10 chrX 27207331 27207631 -139442665 - RMER1C Other Other -523 819 510 2 792 21 0 0 0 chrX 27207722 27207743 -139442553 + AT_rich Low_complexity Low_complexity 1 21 0 2 792 326 401 26 19 chrX 27207847 27208111 -139442185 - RMER1C Other Other -613 729 464 2 792 396 0 0 0 chrX 27208987 27209031 -139441265 + (TA)n Simple_repeat Simple_repeat 1 44 0 2 792 227 411 20 13 chrX 27209246 27209399 -139440897 - RMER1C Other Other -691 651 498 2 792 3375 8 0 0 chrX 27209414 27209792 -139440504 - L1Md_T LINE L1 0 6582 6205 2 792 29186 38 0 0 chrX 27209792 27214655 -139435641 + L1Md_Gf LINE L1 95 5054 -832 2 792 306 383 46 10 chrX 27215475 27215670 -139434626 - RMER1C Other Other -679 663 462 2 792 298 419 42 30 chrX 27215800 27216335 -139433961 - RMER1C Other Other -509 833 378 2 792 469 385 40 17 chrX 27217277 27217623 -139432673 - RMER1C Other Other -468 874 521 2 792 3384 167 8 3 chrX 27220217 27220865 -139429431 + L1Md_A LINE L1 441 1091 -5633 2 792 2553 96 0 2 chrX 27220863 27221258 -139429038 + L1Md_A LINE L1 1977 2370 -3513 2 792 20078 73 0 2 chrX 27221269 27224009 -139426287 + L1Md_A LINE L1 2850 5586 -297 2 792 7745 61 1 2 chrX 27224009 27224994 -139425302 + L1Md_F2 LINE L1 5587 6570 -12 2 792 4031 76 0 0 chrX 27224995 27225833 -139424463 + L1Md_Gf LINE L1 828 1762 -4124 2 792 800 127 35 21 chrX 27225837 27225982 -139424314 - L1_Mus1 LINE L1 0 6567 6421 2 792 283 303 56 70 chrX 27226262 27226546 -139423750 - RMER17C LTR ERVK -48 362 83 2 792 5860 129 6 27 chrX 27227010 27227977 -139422319 + Lx3A LINE L1 6028 6974 -7 2 792 231 320 62 37 chrX 27229291 27229453 -139420843 + L2 LINE L2 1494 1659 -1760 2 792 181 347 52 10 chrX 27229816 27229912 -139420384 + L2 LINE L2 1926 2025 -1394 2 792 574 320 40 15 chrX 27229926 27230133 -139420163 - B4A SINE B4 -2 290 83 2 792 228 86 0 0 chrX 27230179 27230214 -139420082 + (TGG)n Simple_repeat Simple_repeat 1 35 0 2 792 346 325 115 39 chrX 27230310 27230544 -139419752 + L2 LINE L2 2049 2300 -1119 2 792 4612 132 12 19 chrX 27230549 27231346 -139418950 + YREP_Mm Unknown Unknown 986 1777 -35 2 792 454 289 0 0 chrX 27232188 27232292 -139418004 + B3 SINE B2 98 201 -15 2 792 384 252 75 8 chrX 27232352 27232472 -139417824 + B1F SINE Alu 21 148 -1 2 792 912 237 19 0 chrX 27232618 27232825 -139417471 + B3 SINE B2 1 211 -5 2 792 605 331 97 34 chrX 27233058 27233327 -139416969 + B4A SINE B4 4 289 -3 2 792 17389 175 37 49 chrX 27233457 27236150 -139414146 + L1VL2 LINE L1 300 2807 -3076 2 792 925 119 0 0 chrX 27236150 27236284 -139414012 + B1_Mus2 SINE Alu 1 134 -13 2 792 294 87 0 0 chrX 27236294 27236340 -139413956 + (TAA)n Simple_repeat Simple_repeat 2 47 0 2 792 17389 160 20 37 chrX 27236340 27238295 -139412001 + L1VL2 LINE L1 2809 4755 -1128 2 792 5186 145 19 1 chrX 27238296 27239147 -139411149 + Lx LINE L1 5787 6652 -2 2 792 21 0 0 0 chrX 27239147 27239168 -139411128 + AT_rich Low_complexity Low_complexity 1 21 0 2 792 26 88 0 0 chrX 27239211 27239279 -139411017 + AT_rich Low_complexity Low_complexity 1 68 0 2 792 375 23 0 0 chrX 27240443 27240487 -139409809 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 792 399 21 0 0 chrX 27240488 27240536 -139409760 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 792 280 259 95 69 chrX 27240856 27240972 -139409324 + B1F SINE Alu 29 147 -2 2 792 225 333 47 70 chrX 27240967 27240987 -139409309 + ID_B1 SINE B4 70 195 -29 2 792 257 283 101 28 chrX 27240987 27241096 -139409200 + B1F SINE Alu 1 117 -32 2 792 765 294 39 24 chrX 27241879 27242085 -139408211 - B3 SINE B2 -6 210 2 2 792 921 127 14 0 chrX 27242342 27242484 -139407812 - B1_Mus1 SINE Alu -1 147 4 2 792 358 264 162 10 chrX 27242485 27242683 -139407613 - B4 SINE B4 -62 230 3 2 792 21 36 0 0 chrX 27243319 27243347 -139406949 + AT_rich Low_complexity Low_complexity 1 28 0 2 792 321 322 49 8 chrX 27243595 27243717 -139406579 - B1F SINE Alu -3 146 20 2 792 25361 147 6 2 chrX 27243967 27249138 -139401158 + L1_Mus3 LINE L1 1445 6634 -4 2 792 208 147 0 0 chrX 27249569 27249603 -139400693 + (A)n Simple_repeat Simple_repeat 1 34 0 2 792 342 267 0 0 chrX 27249781 27249882 -139400414 + (TA)n Simple_repeat Simple_repeat 2 102 0 2 792 264 350 20 10 chrX 27250457 27250558 -139399738 + PB1D10 SINE Alu 1 102 -15 2 792 235 352 22 11 chrX 27251462 27251551 -139398745 - B3 SINE B2 -14 202 113 2 792 213 284 0 69 chrX 27251555 27251627 -139398669 - B4A SINE B4 -139 153 87 2 792 452 305 65 13 chrX 27251636 27251789 -139398507 - B3 SINE B2 -53 163 3 2 792 387 0 0 0 chrX 27251873 27251916 -139398380 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 792 6972 104 24 13 chrX 27252036 27253819 -139396477 - L1_Mus1 LINE L1 0 6567 4778 2 792 7281 81 8 5 chrX 27253800 27254977 -139395319 - L1Md_F2 LINE L1 0 6582 5405 2 792 17702 158 11 15 chrX 27254975 27258307 -139391989 - L1_Mus1 LINE L1 -1075 4808 1492 2 792 6821 158 27 6 chrX 27258305 27259627 -139390669 - L1_Mus3 LINE L1 -690 5948 4601 2 792 607 207 9 0 chrX 27259626 27259737 -139390559 - Lx4A LINE L1 -228 6830 6719 2 792 2093 262 69 15 chrX 27260593 27261205 -139389091 - Lx2B LINE L1 -14 6986 6342 2 792 3091 158 66 13 chrX 27261202 27261362 -139388934 + L1_Mur2 LINE L1 4537 4730 -1147 2 792 188 35 35 0 chrX 27261362 27261391 -139388905 + (TAA)n Simple_repeat Simple_repeat 1 30 0 2 792 3091 158 66 13 chrX 27261391 27261840 -139388456 + L1_Mur2 LINE L1 4731 5178 -699 2 792 472 111 97 39 chrX 27262013 27262087 -139388209 - URR1B DNA MER1_type 0 225 150 2 792 180 0 0 0 chrX 27262087 27262107 -139388189 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 792 472 111 97 39 chrX 27262107 27262135 -139388161 - URR1B DNA MER1_type -76 149 117 2 792 327 252 45 0 chrX 27262509 27262636 -139387660 + RLTR1B LTR ERV1 259 454 -170 2 792 24 32 0 0 chrX 27262774 27262805 -139387491 + AT_rich Low_complexity Low_complexity 1 31 0 2 12 1826 237 7 15 chrX 27262945 27263543 -139386753 - Lx6 LINE L1 -1352 6108 5512 2 793 25835 49 150 3 chrX 27263542 27268850 -139381446 - L1Md_T LINE L1 0 6585 335 2 793 1460 240 44 2 chrX 27268846 27269256 -139381040 - Lx6 LINE L1 -349 5531 5105 2 793 1208 217 37 9 chrX 27269261 27269587 -139380709 - Lx6 LINE L1 -2035 3845 3511 2 793 698 240 57 33 chrX 27269587 27269751 -139380545 - Lx6 LINE L1 -3397 2480 2324 2 793 297 0 0 0 chrX 27269751 27269784 -139380512 + (TC)n Simple_repeat Simple_repeat 2 34 0 2 793 698 240 57 33 chrX 27269784 27269830 -139380466 - Lx6 LINE L1 -3554 2323 2266 2 793 653 322 50 18 chrX 27269836 27270054 -139380242 - ORR1D2 LTR MaLR -145 225 1 2 793 493 389 4 0 chrX 27270056 27270290 -139380006 + Lx8 LINE L1 6956 7190 -283 2 793 931 290 47 22 chrX 27270397 27270757 -139379539 + ORR1D2 LTR MaLR 1 369 -1 2 793 488 289 7 21 chrX 27270912 27271057 -139379239 + Lx8 LINE L1 6640 6782 -691 2 793 22 70 0 0 chrX 27271135 27271178 -139379118 + AT_rich Low_complexity Low_complexity 1 43 0 2 793 253 244 12 25 chrX 27271299 27271379 -139378917 - Lx9 LINE L1 -1398 6246 6168 2 793 271 442 0 0 chrX 27271432 27271570 -139378726 + RMER1C Other Other 535 672 -670 2 793 316 420 13 48 chrX 27271893 27272347 -139377949 + RMER1C Other Other 412 801 -541 2 793 275 52 33 33 chrX 27272779 27272839 -139377457 + (CAAAA)n Simple_repeat Simple_repeat 3 62 0 2 793 244 338 13 0 chrX 27272956 27273033 -139377263 + RMER1C Other Other 599 676 -666 2 793 340 396 43 50 chrX 27273934 27274620 -139375676 + RMER1C Other Other 375 874 -468 2 793 24647 71 3 13 chrX 27274682 27279326 -139370970 - L1Md_F3 LINE L1 0 6584 1970 2 793 207 0 0 0 chrX 27279326 27279349 -139370947 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 793 24647 122 11 30 chrX 27279349 27281112 -139369184 - L1Md_F3 LINE L1 -3914 1969 233 2 793 210 37 0 0 chrX 27282316 27282343 -139367953 + (A)n Simple_repeat Simple_repeat 1 27 0 2 793 314 431 29 30 chrX 27282608 27283283 -139367013 + RMER1C Other Other 444 858 -484 2 793 604 383 43 21 chrX 27283763 27284213 -139366083 + RMER1C Other Other 412 874 -468 2 793 325 415 35 29 chrX 27284255 27284568 -139365728 + RMER1C Other Other 423 737 -605 2 793 275 0 29 0 chrX 27284677 27284712 -139365584 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 793 279 0 0 0 chrX 27284712 27284742 -139365554 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 793 463 429 29 17 chrX 27285102 27285641 -139364655 + RMER1C Other Other 378 833 -509 2 793 313 410 27 7 chrX 27285758 27285953 -139364343 + RMER1C Other Other 419 761 -581 2 793 379 420 37 48 chrX 27286586 27287129 -139363167 + RMER1C Other Other 378 837 -505 2 793 355 428 11 27 chrX 27287601 27287966 -139362330 + RMER1C Other Other 509 867 -475 2 793 386 405 26 19 chrX 27288061 27288325 -139361971 + RMER1C Other Other 464 729 -613 2 793 440 423 12 0 chrX 27288601 27288849 -139361447 + RMER1C Other Other 421 671 -671 2 793 432 378 38 23 chrX 27288944 27289495 -139360801 + RMER1C Other Other 362 865 -477 2 793 24896 45 0 0 chrX 27289565 27292680 -139357616 - L1_Mm LINE L1 -1059 4824 1710 2 793 10539 183 30 12 chrX 27292680 27295526 -139354770 - Lx4A LINE L1 -427 6631 3725 2 793 3928 177 50 5 chrX 27295538 27296570 -139353726 + Lx3C LINE L1 5353 6423 -553 2 793 977 139 0 0 chrX 27296563 27296721 -139353575 + L1_Mm LINE L1 4206 4363 -1520 2 793 1604 63 13 5 chrX 27296731 27296955 -139353341 - MT2_Mm LTR ERVL 0 493 268 2 793 25836 131 18 47 chrX 27296955 27297448 -139352848 - L1Md_F LINE L1 -145 5738 5245 2 793 558 0 0 0 chrX 27297448 27297510 -139352786 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 793 25836 163 31 79 chrX 27297510 27302979 -139347317 - L1Md_F LINE L1 -639 5244 217 2 793 943 159 62 19 chrX 27303011 27303222 -139347074 - L1_Mm LINE L1 -430 5453 5234 2 793 1082 267 82 0 chrX 27303387 27303679 -139346617 + MER2 DNA MER2_type 6 321 -24 2 793 849 278 10 0 chrX 27304099 27304304 -139345992 + B3 SINE B2 1 207 -9 2 793 327 25 0 0 chrX 27304389 27304429 -139345867 + (TTCC)n Simple_repeat Simple_repeat 2 41 0 3 793 606 271 29 68 chrX 27304497 27304703 -139345593 - B3A SINE B2 0 198 1 3 793 679 270 51 29 chrX 27305005 27305280 -139345016 + Lx7 LINE L1 5857 6137 -1559 3 793 2013 264 46 23 chrX 27305274 27305919 -139344377 + Lx7 LINE L1 6027 6666 -794 3 793 488 148 0 0 chrX 27306155 27306243 -139344053 + RMER3D-int LTR ERVK 489 564 -2278 3 793 657 209 88 33 chrX 27306258 27306504 -139343792 + RMER3D-int LTR ERVK 652 849 -1993 3 793 521 229 72 37 chrX 27306525 27306847 -139343449 + RMER3D-int LTR ERVK 354 804 -2038 3 793 547 166 76 17 chrX 27306855 27307093 -139343203 + GA-rich Low_complexity Low_complexity 1 251 0 3 793 1636 183 165 29 chrX 27307138 27307460 -139342836 + RMER3D-int LTR ERVK 1014 1383 -1459 3 793 3213 51 2 0 chrX 27307460 27307855 -139342441 - MTA_Mm LTR MaLR 0 396 1 3 793 1636 193 13 36 chrX 27307855 27308012 -139342284 + RMER3D-int LTR ERVK 1384 1533 -1309 3 793 577 221 40 33 chrX 27308040 27308190 -139342106 + RMER3D-int LTR ERVK 1528 1678 -1164 3 793 2920 200 117 14 chrX 27308212 27309136 -139341160 + MYSERV16_I-int LTR ERVK 1308 2326 0 3 793 2870 93 7 2 chrX 27309136 27309555 -139340741 + BGLII LTR ERVK 1 421 0 3 793 1323 219 64 36 chrX 27309794 27310227 -139340069 - RLTR21 LTR ERVK -150 1254 706 3 793 12091 82 5 2 chrX 27310234 27312567 -139337729 - L1Md_F2 LINE L1 -19 6563 4225 3 793 13353 113 6 34 chrX 27312550 27315368 -139334928 - L1Md_F2 LINE L1 -2718 3165 446 3 793 857 154 11 51 chrX 27315371 27315549 -139334747 - RLTR21 LTR ERVK -855 717 547 3 793 462 18 0 0 chrX 27315556 27315611 -139334685 + (A)n Simple_repeat Simple_repeat 1 55 0 3 793 1425 220 22 40 chrX 27315628 27315950 -139334346 - RLTR21 LTR ERVK -1248 324 9 3 793 1723 260 20 30 chrX 27316448 27316690 -139333606 - Lx6 LINE L1 -1319 6141 5904 3 793 2042 196 17 14 chrX 27316690 27317110 -139333186 - MTC LTR MaLR 0 421 1 3 793 1723 260 20 30 chrX 27317110 27317407 -139332889 - Lx6 LINE L1 -1557 5903 5607 3 793 1076 206 25 3 chrX 27317414 27317697 -139332599 - L1_Mur3 LINE L1 -2593 3287 2999 3 793 3681 144 21 24 chrX 27317698 27318228 -139332068 - L1_Mus3 LINE L1 -8 6630 6101 3 793 2730 67 0 0 chrX 27318228 27318570 -139331726 - ORR1A1 LTR MaLR -4 342 1 3 793 3681 144 21 24 chrX 27318570 27318694 -139331602 - L1_Mus3 LINE L1 -538 6100 5978 3 793 4495 63 40 7 chrX 27318694 27319467 -139330829 + L1Md_F2 LINE L1 5273 6062 -520 3 793 330 78 15 15 chrX 27319467 27319532 -139330764 + L1Md_F2 LINE L1 6515 6579 -3 3 793 1182 301 67 51 chrX 27319532 27320116 -139330180 - RodERV21-int LTR ERV1 -3327 1664 1072 3 793 8369 11 0 0 chrX 27321130 27322084 -139328212 + L1Md_A LINE L1 4633 5586 -297 3 793 8698 17 0 0 chrX 27322084 27323075 -139327221 + L1Md_A LINE L1 5587 6577 -5 3 793 712 61 0 115 chrX 27323103 27323233 -139327063 - RLTRETN_Mm LTR ERVK -207 115 1 3 793 7021 198 43 29 chrX 27323233 27324739 -139325557 - RLTR14-int LTR ERV1 -596 4721 3195 3 793 1079 173 190 48 chrX 27324739 27325097 -139325199 + RLTR9E LTR ERVK 1 409 0 3 793 714 234 22 79 chrX 27325099 27325422 -139324874 + ETnERV2-int LTR ERVK 2 372 -2942 3 793 254 200 0 18 chrX 27325417 27325473 -139324823 + RLTR45-int LTR ERVK 2091 2145 -5099 3 793 1844 169 48 17 chrX 27325963 27326409 -139323887 + ETnERV2-int LTR ERVK 1678 2085 -5321 3 793 2719 182 34 30 chrX 27326433 27327087 -139323209 + ETnERV2-int LTR ERVK 1934 3123 -4283 3 793 3997 70 0 4 chrX 27327088 27327606 -139322690 - L1Md_F2 LINE L1 -14 6568 6053 3 793 6259 67 4 19 chrX 27327610 27328478 -139321818 + RLTR13A2 LTR ERVK 1 958 0 3 793 44170 33 12 11 chrX 27328478 27332491 -139317805 + ETnERV3-int LTR ERVK 1 3978 -1830 3 793 216 86 0 0 chrX 27332491 27332526 -139317770 + (TTAA)n Simple_repeat Simple_repeat 3 37 0 3 793 44170 35 13 10 chrX 27332526 27334294 -139316002 + ETnERV3-int LTR ERVK 3979 5784 -24 3 793 6273 69 7 21 chrX 27334317 27335188 -139315108 + RLTR13A2 LTR ERVK 100 958 0 3 793 31440 88 2 2 chrX 27335188 27340152 -139310144 - L1Md_F2 LINE L1 -528 6054 1105 3 793 33083 80 1 13 chrX 27340143 27346282 -139304014 - L1Md_F2 LINE L1 0 6582 519 3 793 6461 91 4 6 chrX 27346283 27347216 -139303080 - L1Md_F LINE L1 -5494 1025 95 3 793 632 263 26 140 chrX 27347280 27347373 -139302923 + MMETn-int LTR ERVK 5040 5120 -2124 3 793 4799 63 0 7 chrX 27347373 27347982 -139302314 + L1Md_F2 LINE L1 5966 6570 -12 3 793 2873 183 15 43 chrX 27347982 27348927 -139301369 + MMETn-int LTR ERVK 2541 3719 -1125 3 793 726 195 0 0 chrX 27348922 27349045 -139301251 + MMETn-int LTR ERVK 6539 6661 -745 3 793 3082 206 51 16 chrX 27349075 27349814 -139300482 - RLTR14-int LTR ERV1 -2117 3200 2436 3 793 1874 229 56 31 chrX 27351269 27351791 -139298505 + RLTR40 LTR ERVK 22 556 -261 3 793 392 178 9 0 chrX 27351796 27351903 -139298393 + GA-rich Low_complexity Low_complexity 2 109 0 3 793 636 280 52 44 chrX 27351903 27352090 -139298206 + RLTR40 LTR ERVK 566 752 -65 3 793 6177 91 34 2 chrX 27352090 27352504 -139297792 - RLTR13B1 LTR ERVK 0 893 476 3 793 342 0 0 0 chrX 27352504 27352542 -139297754 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 793 6177 91 34 2 chrX 27352542 27352993 -139297303 - RLTR13B1 LTR ERVK -418 475 3 3 793 636 280 52 44 chrX 27352993 27353055 -139297241 + RLTR40 LTR ERVK 753 817 0 3 793 275 0 0 28 chrX 27353246 27353282 -139297014 + (TAA)n Simple_repeat Simple_repeat 2 36 0 3 793 681 232 57 10 chrX 27354813 27355005 -139295291 - Lx9 LINE L1 -243 7401 7201 3 793 398 191 0 0 chrX 27355005 27355089 -139295207 + Lx9 LINE L1 7554 7637 -7 3 793 473 287 13 0 chrX 27355098 27355248 -139295048 + Lx5 LINE L1 6825 6976 -74 3 793 357 24 0 0 chrX 27355256 27355298 -139294998 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 3 793 597 231 35 14 chrX 27355310 27355455 -139294841 + B1_Mur2 SINE Alu 1 148 -1 3 793 1907 154 30 0 chrX 27355484 27355821 -139294475 + L1_Mus3 LINE L1 6284 6630 -8 3 793 28 48 0 0 chrX 27355834 27355876 -139294420 + AT_rich Low_complexity Low_complexity 1 42 0 3 793 691 238 7 12 chrX 27356004 27356189 -139294107 + Lx4B LINE L1 6809 6994 -64 3 793 2685 179 32 2 chrX 27356251 27356843 -139293453 - L1_Mur2 LINE L1 -1176 4701 4092 3 793 10127 144 33 23 chrX 27356843 27358213 -139292083 - RLTR22_Mur LTR ERVK 0 1848 461 3 793 403 60 0 29 chrX 27358213 27358282 -139292014 + (TAG)n Simple_repeat Simple_repeat 3 69 0 3 793 10127 144 33 23 chrX 27358282 27358741 -139291555 - RLTR22_Mur LTR ERVK -1388 460 1 3 793 795 158 199 0 chrX 27358741 27358982 -139291314 - L1_Mur2 LINE L1 -1782 4095 3807 3 793 1375 138 25 4 chrX 27359026 27359267 -139291029 + L1_Mus4 LINE L1 6391 6636 0 3 793 180 0 0 0 chrX 27359756 27359776 -139290520 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 3 793 24 0 0 0 chrX 27361169 27361193 -139289103 + AT_rich Low_complexity Low_complexity 1 24 0 3 793 367 261 22 7 chrX 27361478 27361613 -139288683 + L1_Mur2 LINE L1 4334 4470 -1407 3 793 762 329 42 19 chrX 27361618 27362053 -139288243 + Lx6 LINE L1 6506 7296 -164 3 793 1303 204 20 92 chrX 27362036 27362484 -139287812 - L1_Mur2 LINE L1 -2142 3735 3320 3 793 1156 76 0 0 chrX 27362487 27362645 -139287651 - L1_Mus1 LINE L1 0 6567 6410 3 793 20388 130 6 6 chrX 27362648 27366490 -139283806 - L1_Mus1 LINE L1 -434 6133 2294 3 793 459 207 11 0 chrX 27366491 27366578 -139283718 + L1VL1 LINE L1 195 282 -6140 3 793 29797 55 1 3 chrX 27366573 27370598 -139279698 + L1Md_F2 LINE L1 1568 5585 -298 3 793 7641 64 9 0 chrX 27370599 27371574 -139278722 + L1Md_F2 LINE L1 5587 6570 -12 3 793 1325 203 75 44 chrX 27371574 27372003 -139278293 + RLTR21 LTR ERVK 706 1251 -153 3 793 2731 99 19 2 chrX 27372244 27372658 -139277638 - BGLII LTR ERVK 0 421 1 3 793 2410 215 119 7 chrX 27372658 27373574 -139276722 - MYSERV16_I-int LTR ERVK 0 2326 1308 3 793 1920 211 88 78 chrX 27373596 27373931 -139276365 - RMER3D-int LTR ERVK -1164 1678 1384 3 793 3192 53 5 0 chrX 27373931 27374325 -139275971 + MTA_Mm LTR MaLR 1 396 0 3 793 1920 211 88 78 chrX 27374325 27374645 -139275651 - RMER3D-int LTR ERVK -1459 1383 1016 3 793 483 158 11 68 chrX 27374692 27374882 -139275414 + CT-rich Low_complexity Low_complexity 2 180 0 3 793 361 130 38 25 chrX 27374895 27374974 -139275322 - RMER3D-int LTR ERVK -2274 568 489 3 793 556 179 16 35 chrX 27375046 27375193 -139275103 - RMER3D-int LTR ERVK -2069 773 650 3 793 580 218 25 40 chrX 27375279 27375480 -139274816 - RMER3D-int LTR ERVK -1993 849 652 3 793 445 145 0 0 chrX 27375495 27375583 -139274713 - RMER3D-int LTR ERVK -2278 564 489 3 793 1775 267 50 19 chrX 27375847 27376423 -139273873 - Lx7 LINE L1 -1042 6654 6061 3 793 596 244 69 47 chrX 27376459 27376734 -139273562 - Lx7 LINE L1 -1559 6137 5857 3 793 1086 264 82 0 chrX 27377133 27377425 -139272871 - MER2 DNA MER2_type -24 321 6 3 793 851 162 62 19 chrX 27377590 27377798 -139272498 + L1_Mm LINE L1 5234 5450 -433 3 793 531 270 30 126 chrX 27377844 27378322 -139271974 + L1VL1 LINE L1 273 693 -5941 3 793 452 238 16 8 chrX 27378353 27378480 -139271816 + L1Md_F LINE L1 578 705 -5814 3 793 2076 202 11 2 chrX 27378491 27378966 -139271330 + L1Md_F LINE L1 630 1108 -5411 3 793 23287 134 19 69 chrX 27378972 27383412 -139266884 + L1VL1 LINE L1 1080 5234 -649 3 793 252 0 0 0 chrX 27383412 27383440 -139266856 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 793 23287 135 19 70 chrX 27383440 27383932 -139266364 + L1VL1 LINE L1 5235 5737 -146 3 793 1615 63 13 5 chrX 27383932 27384156 -139266140 + MT2_Mm LTR ERVL 268 493 0 3 793 957 128 0 0 chrX 27384168 27384324 -139265972 - L1_Mm LINE L1 -1522 4361 4206 3 793 3675 176 50 5 chrX 27384317 27385348 -139264948 - Lx3C LINE L1 -553 6423 5353 3 793 10117 185 30 8 chrX 27385360 27388342 -139261954 + Lx4B LINE L1 3725 6782 -276 3 793 286 371 71 12 chrX 27388603 27388843 -139261453 - RMER1C Other Other -494 848 595 3 793 226 184 0 58 chrX 27389048 27389100 -139261196 - RMER2 LTR ERV1 -234 333 285 3 793 390 419 12 0 chrX 27389317 27389565 -139260731 - RMER1C Other Other -671 671 421 3 793 266 405 26 19 chrX 27389844 27390108 -139260188 - RMER1C Other Other -613 729 464 3 793 284 422 12 32 chrX 27390224 27390569 -139259727 - RMER1C Other Other -496 846 509 3 793 288 390 17 50 chrX 27391205 27391386 -139258910 - RMER1C Other Other -691 651 383 3 793 256 433 18 14 chrX 27392759 27393038 -139257258 - RMER1C Other Other -478 864 585 3 793 459 0 0 0 chrX 27393426 27393477 -139256819 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 793 254 328 36 29 chrX 27393593 27393731 -139256565 - RMER1C Other Other -753 589 451 3 99 388 405 41 19 chrX 27393948 27394398 -139255898 - RMER1C Other Other -468 874 412 3 794 299 419 23 17 chrX 27394901 27395248 -139255048 - RMER1C Other Other -507 835 487 3 794 294 29 0 0 chrX 27395836 27395871 -139254425 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 3 794 30790 87 4 19 chrX 27397078 27402517 -139247779 + L1Md_F3 LINE L1 233 5586 -297 3 794 7651 70 6 0 chrX 27402517 27403509 -139246787 + L1Md_F3 LINE L1 5587 6584 0 3 794 347 261 139 6 chrX 27405354 27405512 -139244784 - L1MEf LINE L1 -4140 2060 1882 3 794 288 372 0 0 chrX 27406209 27406330 -139243966 - RMER1C Other Other -685 657 537 3 794 225 442 0 0 chrX 27406654 27406792 -139243504 - RMER1C Other Other -670 672 535 3 794 233 244 12 25 chrX 27406845 27406925 -139243371 + Lx9 LINE L1 6168 6246 -1398 3 794 22 70 0 0 chrX 27407046 27407089 -139243207 + AT_rich Low_complexity Low_complexity 1 43 0 3 794 441 264 8 23 chrX 27407180 27407312 -139242984 - Lx8 LINE L1 -704 6769 6640 3 794 841 292 35 35 chrX 27407467 27407836 -139242460 - ORR1D2 LTR MaLR -1 369 1 3 794 422 389 4 0 chrX 27407940 27408174 -139242122 - Lx8 LINE L1 -283 7190 6956 3 794 630 327 47 14 chrX 27408176 27408387 -139241909 + ORR1D2 LTR MaLR 1 218 -152 3 794 536 277 47 24 chrX 27408400 27408448 -139241848 + Lx6 LINE L1 2265 2322 -3555 3 794 387 0 0 0 chrX 27408448 27408491 -139241805 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 794 536 277 47 24 chrX 27408491 27408653 -139241643 + Lx6 LINE L1 2323 2479 -3398 3 794 1100 221 40 12 chrX 27408653 27408979 -139241317 + Lx6 LINE L1 3510 3844 -2033 3 794 2754 246 21 14 chrX 27408984 27409977 -139240319 + Lx6 LINE L1 5105 6108 -1352 3 794 343 290 71 47 chrX 27410286 27410456 -139239840 - RLTR1B LTR ERV1 -173 339 166 4 794 433 148 78 19 chrX 27410789 27410817 -139239479 + URR1B DNA MER1_type 117 144 -81 4 794 396 0 0 0 chrX 27410817 27410861 -139239435 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 794 433 148 78 19 chrX 27410861 27410935 -139239361 + URR1B DNA MER1_type 145 224 -1 4 794 2907 158 66 13 chrX 27411108 27411557 -139238739 - L1_Mur2 LINE L1 -699 5178 4731 4 794 216 0 0 0 chrX 27411557 27411581 -139238715 + (TTA)n Simple_repeat Simple_repeat 1 24 0 4 794 2907 158 66 13 chrX 27411581 27411741 -139238555 - L1_Mur2 LINE L1 -1147 4730 4537 4 794 2063 255 68 3 chrX 27411738 27412344 -139237952 + Lx2B LINE L1 6342 6986 -14 4 794 589 189 9 0 chrX 27413197 27413308 -139236988 + Lx4A LINE L1 6719 6830 -228 4 794 6376 158 27 12 chrX 27413307 27414639 -139235657 + L1_Mus3 LINE L1 4601 5948 -690 4 794 22326 146 14 54 chrX 27414637 27418142 -139232154 + L1_Mus1 LINE L1 1492 4795 -1088 4 794 6916 78 31 14 chrX 27418142 27419121 -139231175 + L1Md_F2 LINE L1 5588 6582 0 4 794 22326 118 20 42 chrX 27419121 27420897 -139229399 + L1_Mus1 LINE L1 4796 6567 0 4 794 297 0 0 0 chrX 27421017 27421050 -139229246 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 794 1813 138 254 31 chrX 27421139 27421587 -139228709 - RLTR6_Mm LTR ERV1 -70 584 37 4 794 60254 36 23 1 chrX 27421700 27429310 -139220986 - RLTR6-int LTR ERV1 0 7778 2 4 794 1872 146 244 30 chrX 27429312 27429779 -139220517 - RLTR6_Mm LTR ERV1 -51 603 37 4 794 481 293 66 13 chrX 27429893 27430045 -139220251 + B3 SINE B2 4 163 -53 4 794 233 278 0 65 chrX 27430049 27430126 -139220170 + B4A SINE B4 82 153 -139 4 794 238 352 22 11 chrX 27430130 27430219 -139220077 + B3 SINE B2 113 202 -14 4 794 247 357 20 10 chrX 27431123 27431222 -139219074 - PB1D10 SINE Alu -15 102 3 4 794 266 294 15 0 chrX 27431160 27431228 -139219068 - B4A SINE B4 -142 150 82 4 794 204 40 0 0 chrX 27431810 27431835 -139218461 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 794 447 106 0 0 chrX 27431835 27431900 -139218396 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 4 794 210 162 0 0 chrX 27432066 27432103 -139218193 + T-rich Low_complexity Low_complexity 1 37 0 4 794 23979 146 6 2 chrX 27432534 27437705 -139212591 - L1_Mus3 LINE L1 -4 6634 1445 4 794 267 355 49 8 chrX 27437956 27438078 -139212218 + B1F SINE Alu 20 146 -3 4 794 213 296 0 0 chrX 27438382 27438426 -139211870 - ID4 SINE ID -36 47 4 4 794 230 310 127 0 chrX 27438659 27438730 -139211566 + ID4 SINE ID 4 83 0 4 794 371 251 160 10 chrX 27438992 27439192 -139211104 + B4 SINE B4 1 230 -62 4 794 1040 98 7 0 chrX 27439193 27439336 -139210960 + B1_Mus1 SINE Alu 4 147 -1 4 794 864 291 14 24 chrX 27439593 27439804 -139210492 + B3 SINE B2 2 210 -6 4 794 256 292 101 28 chrX 27440587 27440696 -139209600 - B1F SINE Alu -32 117 1 4 794 235 333 47 70 chrX 27440696 27440716 -139209580 - ID_B1 SINE B4 -29 195 70 4 794 260 278 134 60 chrX 27440711 27440845 -139209451 - B1F SINE Alu -2 147 4 4 794 24 0 0 0 chrX 27440845 27440869 -139209427 + AT_rich Low_complexity Low_complexity 1 24 0 4 794 411 21 0 0 chrX 27441147 27441195 -139209101 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 794 465 19 0 0 chrX 27441196 27441250 -139209046 + (GA)n Simple_repeat Simple_repeat 2 55 0 4 794 5251 141 19 1 chrX 27442546 27443397 -139206899 - Lx LINE L1 -2 6652 5787 4 794 15854 158 17 34 chrX 27443394 27445337 -139204959 - L1VL2 LINE L1 -1123 4760 2824 4 794 351 0 0 0 chrX 27445337 27445376 -139204920 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 794 15854 159 19 56 chrX 27445376 27445464 -139204832 - L1VL2 LINE L1 -3060 2823 2808 4 794 955 119 0 0 chrX 27445464 27445598 -139204698 - B1_Mus2 SINE Alu -13 134 1 4 794 15854 176 33 61 chrX 27445598 27448295 -139202001 - L1VL2 LINE L1 -3076 2807 300 4 794 22 56 0 0 chrX 27448388 27448424 -139201872 + AT_rich Low_complexity Low_complexity 1 36 0 4 794 658 319 97 34 chrX 27448433 27448702 -139201594 - B4A SINE B4 -3 289 4 4 794 966 227 19 0 chrX 27448935 27449142 -139201154 - B3 SINE B2 -5 211 1 4 794 352 269 75 8 chrX 27449288 27449408 -139200888 - B1F SINE Alu -1 148 21 4 794 456 289 0 0 chrX 27449468 27449572 -139200724 - B3 SINE B2 -15 201 98 4 794 4634 129 15 18 chrX 27450412 27451206 -139199090 - YREP_Mm Unknown Unknown -35 1777 986 4 794 331 341 111 34 chrX 27451211 27451445 -139198851 - L2 LINE L2 -1119 2300 2049 4 794 207 114 0 0 chrX 27451541 27451576 -139198720 + (CCA)n Simple_repeat Simple_repeat 1 35 0 4 794 549 338 39 7 chrX 27451674 27451829 -139198467 + B4A SINE B4 131 290 -2 4 794 205 364 30 23 chrX 27452100 27452232 -139198064 - L2 LINE L2 -1769 1650 1518 4 794 5129 126 78 32 chrX 27453570 27454497 -139195799 - Lx3A LINE L1 -7 6974 6006 4 794 305 307 56 70 chrX 27454938 27455222 -139195074 + RMER17C LTR ERVK 83 362 -48 4 794 36602 9 0 1 chrX 27455376 27461163 -139189133 + L1Md_A LINE L1 1 5586 -297 4 794 8993 6 0 0 chrX 27461163 27462159 -139188137 + L1Md_A LINE L1 5587 6582 0 4 794 812 120 35 21 chrX 27462325 27462470 -139187826 + L1_Mus1 LINE L1 6421 6567 0 4 794 3572 79 8 30 chrX 27462474 27463301 -139186995 - L1Md_A LINE L1 -4124 1759 964 4 794 29506 81 5 41 chrX 27463302 27466405 -139183891 - L1Md_F2 LINE L1 -12 6570 3464 4 794 1136 90 73 0 chrX 27466405 27466583 -139183713 - B2_Mm2 SINE B2 0 195 5 4 794 29506 107 17 49 chrX 27466583 27470015 -139180281 - L1Md_F2 LINE L1 -2420 3463 273 4 794 1280 183 52 0 chrX 27470013 27470264 -139180032 - L1VL1 LINE L1 -6156 266 3 4 794 20652 136 8 3 chrX 27470265 27471102 -139179194 + L1_Mus1 LINE L1 2294 3132 -2751 4 794 210 37 0 0 chrX 27471102 27471129 -139179167 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 794 20652 125 7 3 chrX 27471129 27474100 -139176196 + L1_Mus1 LINE L1 3133 6118 -449 4 794 1160 109 17 0 chrX 27474101 27474276 -139176020 + L1_Mus1 LINE L1 6390 6567 0 4 794 1415 199 20 82 chrX 27474278 27474728 -139175568 + L1_Mur2 LINE L1 3320 3741 -2136 4 794 718 331 43 26 chrX 27474705 27475139 -139175157 - Lx6 LINE L1 -164 7296 6506 4 794 268 284 22 7 chrX 27475144 27475279 -139175017 - L1_Mur2 LINE L1 -1407 4470 4334 4 794 24 0 0 0 chrX 27475563 27475587 -139174709 + AT_rich Low_complexity Low_complexity 1 24 0 4 794 180 0 0 0 chrX 27476978 27476998 -139173298 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 4 794 11140 34 0 0 chrX 27477366 27479420 -139170876 - L1Md_T LINE L1 0 6582 4529 4 794 1329 142 29 4 chrX 27479452 27479692 -139170604 - L1_Mus4 LINE L1 0 6636 6391 4 794 1169 194 17 14 chrX 27479736 27480024 -139170272 + L1_Mur2 LINE L1 3807 4095 -1782 4 794 10089 141 39 25 chrX 27480024 27480471 -139169825 + RLTR22_Mur LTR ERVK 1 444 -1404 4 794 697 73 0 18 chrX 27480471 27480582 -139169714 + (CTA)n Simple_repeat Simple_repeat 3 111 0 4 794 10089 141 39 25 chrX 27480582 27481957 -139168339 + RLTR22_Mur LTR ERVK 445 1847 -1 4 794 2711 175 37 2 chrX 27481957 27482546 -139167750 + L1_Mur2 LINE L1 4092 4701 -1176 4 794 717 256 19 14 chrX 27482582 27482796 -139167500 - Lx4B LINE L1 -35 7023 6809 4 794 227 263 0 0 chrX 27482805 27482862 -139167434 + T-rich Low_complexity Low_complexity 4 60 0 4 794 26 50 0 0 chrX 27482928 27482968 -139167328 + AT_rich Low_complexity Low_complexity 1 40 0 4 794 1935 156 45 0 chrX 27482980 27483333 -139166963 - L1_Mus3 LINE L1 -8 6630 6262 4 794 342 0 0 0 chrX 27483345 27483383 -139166913 + (T)n Simple_repeat Simple_repeat 1 38 0 4 794 660 208 34 14 chrX 27483383 27483529 -139166767 - B1_Mur3 SINE Alu 0 149 1 4 794 423 0 0 0 chrX 27483544 27483591 -139166705 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 4 794 488 287 13 0 chrX 27483599 27483749 -139166547 - Lx5 LINE L1 -74 6976 6825 4 794 401 191 0 0 chrX 27483758 27483842 -139166454 - Lx9 LINE L1 -7 7637 7554 4 794 648 237 57 10 chrX 27483842 27484034 -139166262 + Lx9 LINE L1 7201 7401 -243 4 794 198 0 0 0 chrX 27485221 27485243 -139165053 + (T)n Simple_repeat Simple_repeat 1 22 0 4 794 1276 27 0 0 chrX 27485243 27485390 -139164906 - B1_Mus2 SINE Alu 0 147 1 4 794 279 0 0 0 chrX 27485763 27485794 -139164502 + (TTC)n Simple_repeat Simple_repeat 2 32 0 4 794 1964 244 53 121 chrX 27486000 27486062 -139164234 - RLTR40 LTR ERVK 0 817 753 4 794 6252 94 24 5 chrX 27486062 27486938 -139163358 + RLTR13B1 LTR ERVK 1 893 0 4 794 1964 244 53 121 chrX 27486938 27487729 -139162567 - RLTR40 LTR ERVK -65 752 22 4 794 3156 206 44 17 chrX 27489172 27489917 -139160379 + RLTR14-int LTR ERV1 2436 3200 -2117 4 794 692 211 0 0 chrX 27489948 27490071 -139160225 - MMETn-int LTR ERVK -745 6661 6539 4 794 2909 170 13 41 chrX 27490066 27490985 -139159311 - MMETn-int LTR ERVK -1703 3141 2541 4 794 318 62 62 0 chrX 27490985 27491050 -139159246 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 4 794 4849 56 0 7 chrX 27491062 27491671 -139158625 - L1Md_F2 LINE L1 -12 6570 5966 4 794 354 158 0 6 chrX 27491672 27491764 -139158532 - MMETn-int LTR ERVK -2291 2553 2473 4 794 6589 88 1 6 chrX 27491832 27492768 -139157528 + L1Md_F LINE L1 95 1025 -5494 4 794 29416 93 5 28 chrX 27492769 27497960 -139152336 + L1Md_F2 LINE L1 519 5587 -296 4 794 7853 50 2 4 chrX 27497961 27498945 -139151351 + L1Md_F2 LINE L1 5589 6570 -12 4 794 695 231 148 10 chrX 27498971 27499281 -139151015 - ETnERV2-int LTR ERVK -2295 4949 4597 4 794 3552 130 47 3 chrX 27499270 27499888 -139150408 - ETnERV2-int LTR ERVK -3321 4085 3441 4 794 841 142 6 105 chrX 27500113 27500294 -139150002 - MMETn-int LTR ERVK -2654 2190 2028 1 794 581 98 0 0 chrX 27500294 27500368 -139149928 + L1_Mm LINE L1 5513 5615 -2170 2 794 8093 69 1 10 chrX 27500368 27501359 -139148937 + L1Md_F2 LINE L1 5587 6568 -14 3 794 298 286 21 21 chrX 27501359 27501377 -139148919 + L1_Mm LINE L1 5616 5633 -2152 2 794 2902 187 40 28 chrX 27501381 27502014 -139148282 - ETnERV2-int LTR ERVK -4271 3135 2496 4 794 1921 181 64 12 chrX 27502035 27502454 -139147842 - ETnERV2-int LTR ERVK -5318 2088 1648 4 794 735 12 0 0 chrX 27502461 27502545 -139147751 + (GAA)n Simple_repeat Simple_repeat 2 85 0 5 794 292 167 0 0 chrX 27502548 27502602 -139147694 - RMER16-int LTR ERVK -5212 194 141 6 794 346 146 0 18 chrX 27503037 27503093 -139147203 - ETnERV2-int LTR ERVK -6278 1128 1074 4 794 759 252 12 106 chrX 27503083 27503412 -139146884 - ETnERV2-int LTR ERVK -4545 299 2 4 794 1238 170 189 53 chrX 27503414 27503774 -139146522 - RLTR9E LTR ERVK 0 409 1 4 794 8883 189 105 25 chrX 27503774 27505736 -139144560 + RLTR14-int LTR ERV1 3195 5312 -5 7 794 963 151 0 0 chrX 27505761 27505913 -139144383 + RLTR14 LTR ERV1 7 158 -224 7 794 2084 200 43 32 chrX 27505913 27506382 -139143914 - ETnERV2-int LTR ERVK -4437 2969 2496 8 794 1921 181 64 12 chrX 27506403 27506822 -139143474 - ETnERV2-int LTR ERVK -5318 2088 1648 8 794 762 11 0 0 chrX 27506829 27506916 -139143380 + (GAA)n Simple_repeat Simple_repeat 2 88 0 9 794 292 167 0 0 chrX 27506919 27506973 -139143323 - RMER16-int LTR ERVK -5212 194 141 1 794 346 146 0 18 chrX 27507408 27507464 -139142832 - ETnERV2-int LTR ERVK -6278 1128 1074 8 794 715 218 11 59 chrX 27507519 27507783 -139142513 - ETnERV2-int LTR ERVK -2997 317 2 8 794 1248 170 190 48 chrX 27507785 27508143 -139142153 - RLTR9E LTR ERVK 0 409 1 8 794 8851 189 105 26 chrX 27508143 27510106 -139140190 + RLTR14-int LTR ERV1 3195 5312 -5 1 794 1673 190 12 21 chrX 27510131 27510459 -139139837 + RLTR14 LTR ERV1 7 331 -51 1 794 1532 137 0 0 chrX 27510459 27510685 -139139611 - L1_Mus3 LINE L1 -185 5698 5473 1 794 4547 107 24 0 chrX 27510687 27511351 -139138945 + L1_Mus3 LINE L1 5712 6391 -247 1 794 1352 275 16 51 chrX 27511356 27511786 -139138510 + RodERV21-int LTR ERV1 2304 2718 -2273 1 794 498 342 31 46 chrX 27511911 27512389 -139137907 + RodERV21-int LTR ERV1 3586 4056 -3035 1 794 377 20 20 0 chrX 27512549 27512599 -139137697 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1 794 636 228 101 34 chrX 27513264 27513473 -139136823 + LTRIS4 LTR ERV1 285 507 0 1 794 667 248 51 79 chrX 27513475 27514026 -139136270 + MuRRS4-int LTR ERV1 5 498 -4565 1 794 1250 233 66 22 chrX 27514361 27514681 -139135615 + MuRRS4-int LTR ERV1 342 675 -4388 1 794 4352 131 23 9 chrX 27514710 27515396 -139134900 + RMER16-int LTR ERVK 666 1361 -4045 1 794 337 172 80 34 chrX 27515483 27515601 -139134695 + RMER16-int LTR ERVK 1386 1448 -3958 1 794 622 145 92 17 chrX 27515585 27515704 -139134592 + MuRRS4-int LTR ERV1 750 877 -4186 1 794 711 266 16 78 chrX 27515704 27515961 -139134335 - LSU-rRNA_Hsa rRNA rRNA -1371 3664 3424 1 794 1471 272 33 7 chrX 27516110 27516532 -139133764 + MuRRS4-int LTR ERV1 1012 1444 -3619 1 794 5281 155 64 25 chrX 27516554 27518861 -139131435 + MuRRS4-int LTR ERV1 1104 4271 -792 2 794 755 196 0 7 chrX 27518852 27519001 -139131295 + MuRRS4-int LTR ERV1 4788 4935 -128 2 794 1172 273 3 7 chrX 27519001 27519311 -139130985 + MuRRS4-int LTR ERV1 4637 4945 -118 2 794 3700 60 20 12 chrX 27519785 27520277 -139130019 - LTRIS2 LTR ERV1 0 564 69 2 794 1099 167 54 25 chrX 27520277 27520517 -139129779 - RLTR1B-int LTR ERV1 -26 5037 4791 2 794 1126 152 58 5 chrX 27520743 27521004 -139129292 - RLTR1B-int LTR ERV1 -486 2813 2669 2 794 5227 86 154 89 chrX 27520991 27522232 -139128064 - RLTR1B-int LTR ERV1 -744 2555 1261 2 794 183 42 0 0 chrX 27522232 27522256 -139128040 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 794 2645 204 111 40 chrX 27522256 27523153 -139127143 - RLTR1B-int LTR ERV1 -3265 1798 835 2 794 4153 152 52 18 chrX 27523157 27523862 -139126434 - RMER16-int LTR ERVK -3988 1418 690 2 794 966 126 90 17 chrX 27523848 27524026 -139126270 - RMER16-int LTR ERVK -5075 331 141 2 794 724 117 52 10 chrX 27524370 27524541 -139125755 - RLTR1B-int LTR ERV1 -3006 293 63 2 99 3576 74 20 14 chrX 27524690 27525183 -139125113 - LTRIS2 LTR ERV1 0 564 69 2 795 3714 315 41 47 chrX 27525298 27526906 -139123390 + RodERV21-int LTR ERV1 2905 4500 -491 2 795 2636 123 35 54 chrX 27526906 27527334 -139122962 + RLTR9B2 LTR ERVK 1 420 0 2 795 3714 315 41 47 chrX 27527334 27527625 -139122671 + RodERV21-int LTR ERV1 4501 4793 -198 2 795 832 152 13 46 chrX 27528069 27528221 -139122075 + B1_Mus1 SINE Alu 2 148 0 2 795 243 219 104 9 chrX 27528367 27528473 -139121823 + L1_Rod LINE L1 5257 5372 -475 3 795 2265 196 70 34 chrX 27528473 27529027 -139121269 - RLTR31A_Mm LTR ERVK 0 584 11 3 795 434 245 27 40 chrX 27529038 27529187 -139121109 + L1_Rod LINE L1 5388 5534 -313 3 795 226 297 13 13 chrX 27529338 27529413 -139120883 + CT-rich Low_complexity Low_complexity 3 77 0 3 795 339 269 58 65 chrX 27530452 27530591 -139119705 + RodERV21-int LTR ERV1 893 1030 -3961 3 795 1324 311 35 39 chrX 27530730 27531271 -139119025 + RodERV21-int LTR ERV1 1114 1652 -3339 3 795 7453 74 13 6 chrX 27531283 27532586 -139117710 - L1Md_F2 LINE L1 -2 6580 5273 3 795 3864 153 20 24 chrX 27532586 27532710 -139117586 + L1_Mus3 LINE L1 5978 6100 -538 3 795 2796 82 0 3 chrX 27532710 27533053 -139117243 + ORR1A1 LTR MaLR 1 342 -4 3 795 3864 153 20 24 chrX 27533053 27533584 -139116712 + L1_Mus3 LINE L1 6101 6630 -8 3 795 1216 192 28 3 chrX 27533585 27533867 -139116429 + L1_Mur3 LINE L1 2999 3287 -2593 3 795 1765 257 20 28 chrX 27533896 27534170 -139116126 + Lx6 LINE L1 5630 5903 -1557 3 795 2202 198 17 14 chrX 27534170 27534590 -139115706 + MTC LTR MaLR 1 421 0 3 795 1765 257 20 28 chrX 27534590 27534824 -139115472 + Lx6 LINE L1 5904 6134 -1326 3 795 249 316 0 17 chrX 27534824 27534940 -139115356 + Lx6 LINE L1 7332 7445 -15 3 795 1495 220 18 39 chrX 27535332 27535663 -139114633 + RLTR21 LTR ERVK 1 324 -1248 4 795 798 159 22 49 chrX 27535709 27535894 -139114402 + RLTR21 LTR ERVK 547 726 -846 4 795 11454 130 67 17 chrX 27535905 27537436 -139112860 + L1Md_F2 LINE L1 446 1958 -3925 4 795 238 67 44 0 chrX 27537436 27537481 -139112815 + (CAA)n Simple_repeat Simple_repeat 2 48 0 4 795 11454 76 126 2 chrX 27537481 27538472 -139111824 + L1Md_F2 LINE L1 1959 3164 -2719 4 795 10173 84 2 3 chrX 27538455 27539818 -139110478 + L1Md_F2 LINE L1 4225 5586 -297 4 795 7963 72 9 0 chrX 27539818 27540793 -139109503 + L1Md_F2 LINE L1 5587 6570 -12 4 795 1249 212 74 50 chrX 27540794 27541225 -139109071 + RLTR21 LTR ERVK 706 1254 -150 4 795 3072 96 7 2 chrX 27541464 27541883 -139108413 - BGLII LTR ERVK 0 421 1 4 795 2963 213 50 55 chrX 27541884 27542840 -139107456 - RMER3D-int LTR ERVK -1 2841 1891 4 795 2521 184 88 83 chrX 27542811 27543161 -139107135 - RMER3D-int LTR ERVK -1152 1690 1384 4 795 3455 48 2 0 chrX 27543161 27543556 -139106740 + MTA_Mm LTR MaLR 1 396 0 4 795 2521 184 87 78 chrX 27543556 27543902 -139106394 - RMER3D-int LTR ERVK -1459 1383 1016 4 795 435 180 5 68 chrX 27543924 27544115 -139106181 + CT-rich Low_complexity Low_complexity 2 180 0 4 795 442 177 13 0 chrX 27544128 27544207 -139106089 - RMER3D-int LTR ERVK -2274 568 489 4 795 538 201 120 34 chrX 27544265 27544440 -139105856 - RMER3D-int LTR ERVK -2036 806 617 4 795 653 228 56 55 chrX 27544461 27544811 -139105485 - RMER3D-int LTR ERVK -1993 849 488 4 795 2038 250 35 135 chrX 27545074 27545961 -139104335 - Lx7 LINE L1 -1042 6654 5857 4 795 590 283 34 73 chrX 27546263 27546469 -139103827 + B3A SINE B2 1 198 0 4 795 381 43 0 0 chrX 27546537 27546584 -139103712 + (GGAA)n Simple_repeat Simple_repeat 4 50 0 5 795 886 283 10 0 chrX 27546668 27546873 -139103423 - B3 SINE B2 -9 207 1 5 795 823 189 68 20 chrX 27546989 27547205 -139103091 + L1_Mm LINE L1 5252 5479 -694 5 795 553 295 15 116 chrX 27547242 27547700 -139102596 + L1_Mus1 LINE L1 264 608 -6030 5 795 505 255 18 36 chrX 27547748 27547915 -139102381 + L1Md_F LINE L1 566 729 -5790 5 795 2096 206 23 0 chrX 27547896 27548366 -139101930 + L1Md_F LINE L1 628 1108 -5411 5 795 27928 124 8 37 chrX 27548363 27554071 -139096225 + L1_Mus1 LINE L1 1071 6567 0 5 795 1523 208 16 3 chrX 27554084 27554398 -139095898 + Lx2 LINE L1 5823 6140 -857 5 795 3481 172 49 10 chrX 27554400 27555333 -139094963 - Lx3C LINE L1 -660 6316 5353 5 795 10388 184 33 10 chrX 27555340 27558324 -139091972 + Lx4A LINE L1 3720 6779 -279 5 795 452 384 46 51 chrX 27558427 27559243 -139091053 - RMER1C Other Other -458 884 362 5 795 396 423 43 23 chrX 27559303 27559697 -139090599 - RMER1C Other Other -523 819 418 5 795 413 401 26 19 chrX 27559819 27560083 -139090213 - RMER1C Other Other -613 729 464 6 795 286 432 12 43 chrX 27560199 27560521 -139089775 - RMER1C Other Other -496 846 535 6 795 307 403 52 63 chrX 27560996 27561537 -139088759 - RMER1C Other Other -469 873 498 6 795 362 383 46 10 chrX 27562157 27562352 -139087944 - RMER1C Other Other -679 663 462 6 795 404 417 50 32 chrX 27562486 27563126 -139087170 - RMER1C Other Other -461 881 378 6 795 301 386 45 34 chrX 27563406 27563830 -139086466 - RMER1C Other Other -605 737 405 6 795 582 385 40 17 chrX 27563959 27564305 -139085991 - RMER1C Other Other -468 874 521 6 795 306 437 23 18 chrX 27564797 27565344 -139084952 - RMER1C Other Other -470 872 373 6 795 234 427 13 37 chrX 27565829 27566128 -139084168 - RMER1C Other Other -625 717 426 6 795 3586 169 8 3 chrX 27566898 27567546 -139082750 + L1Md_A LINE L1 441 1091 -5633 6 795 2683 96 0 2 chrX 27567544 27567939 -139082357 + L1Md_A LINE L1 1977 2370 -3513 6 795 20564 73 0 2 chrX 27567950 27570692 -139079604 + L1Md_A LINE L1 2850 5586 -297 6 795 7734 61 1 2 chrX 27570692 27571677 -139078619 + L1Md_F2 LINE L1 5587 6570 -12 7 795 4024 79 0 0 chrX 27571678 27572516 -139077780 + L1Md_Gf LINE L1 828 1762 -4124 7 795 812 120 35 21 chrX 27572520 27572665 -139077631 - L1_Mus1 LINE L1 0 6567 6421 7 795 283 303 56 70 chrX 27572944 27573228 -139077068 - RMER17C LTR ERVK -48 362 83 7 795 5730 132 12 27 chrX 27573692 27574653 -139075643 + Lx3A LINE L1 6028 6974 -7 7 795 231 320 62 37 chrX 27575966 27576128 -139074168 + L2 LINE L2 1494 1659 -1760 7 795 189 344 52 10 chrX 27576491 27576588 -139073708 + L2 LINE L2 1926 2026 -1393 7 795 574 320 40 15 chrX 27576601 27576808 -139073488 - B4A SINE B4 -2 290 83 7 795 228 86 0 0 chrX 27576854 27576889 -139073407 + (TGG)n Simple_repeat Simple_repeat 1 35 0 7 795 362 320 115 39 chrX 27576985 27577219 -139073077 + L2 LINE L2 2049 2300 -1119 7 795 4584 133 12 19 chrX 27577224 27578021 -139072275 + YREP_Mm Unknown Unknown 986 1777 -35 7 795 454 289 0 0 chrX 27578861 27578965 -139071331 + B3 SINE B2 98 201 -15 7 795 384 252 75 8 chrX 27579025 27579145 -139071151 + B1F SINE Alu 21 148 -1 8 795 912 237 19 0 chrX 27579291 27579498 -139070798 + B3 SINE B2 1 211 -5 8 795 624 327 97 34 chrX 27579731 27580000 -139070296 + B4A SINE B4 4 289 -3 8 795 17395 176 38 49 chrX 27580130 27582823 -139067473 + L1VL2 LINE L1 300 2807 -3076 8 795 925 119 0 0 chrX 27582823 27582957 -139067339 + B1_Mus2 SINE Alu 1 134 -13 8 795 267 93 0 0 chrX 27582967 27583010 -139067286 + (TAA)n Simple_repeat Simple_repeat 2 44 0 8 795 17395 160 20 38 chrX 27583010 27584966 -139065330 + L1VL2 LINE L1 2809 4755 -1128 8 795 5186 145 19 1 chrX 27584967 27585818 -139064478 + Lx LINE L1 5787 6652 -2 8 795 21 0 0 0 chrX 27585818 27585839 -139064457 + AT_rich Low_complexity Low_complexity 1 21 0 8 795 26 88 0 0 chrX 27585882 27585950 -139064346 + AT_rich Low_complexity Low_complexity 1 68 0 8 795 537 16 0 0 chrX 27587117 27587179 -139063117 + (TC)n Simple_repeat Simple_repeat 2 63 0 8 795 471 18 0 0 chrX 27587182 27587238 -139063058 + (CA)n Simple_repeat Simple_repeat 2 57 0 9 795 280 259 95 69 chrX 27587558 27587674 -139062622 + B1F SINE Alu 29 147 -2 9 795 215 333 46 84 chrX 27587669 27587689 -139062607 + ID_B1 SINE B4 70 195 -29 9 795 247 283 99 45 chrX 27587689 27587800 -139062496 + B1F SINE Alu 1 117 -32 9 795 799 289 39 24 chrX 27588583 27588789 -139061507 - B3 SINE B2 -6 210 2 9 795 921 127 14 0 chrX 27589044 27589186 -139061110 - B1_Mus1 SINE Alu -1 147 4 9 795 358 264 162 10 chrX 27589187 27589385 -139060911 - B4 SINE B4 -62 230 3 9 795 21 36 0 0 chrX 27590023 27590051 -139060245 + AT_rich Low_complexity Low_complexity 1 28 0 9 795 321 322 49 8 chrX 27590299 27590421 -139059875 - B1F SINE Alu -3 146 20 9 795 25414 146 6 2 chrX 27590671 27595842 -139054454 + L1_Mus3 LINE L1 1445 6634 -4 9 795 208 147 0 0 chrX 27596273 27596307 -139053989 + (A)n Simple_repeat Simple_repeat 1 34 0 1 795 471 230 0 0 chrX 27596485 27596598 -139053698 + (TA)n Simple_repeat Simple_repeat 2 114 0 1 795 264 350 20 10 chrX 27597173 27597274 -139053022 + PB1D10 SINE Alu 1 102 -15 1 795 235 352 22 11 chrX 27598178 27598267 -139052029 - B3 SINE B2 -14 202 113 1 795 213 284 0 69 chrX 27598271 27598343 -139051953 - B4A SINE B4 -139 153 87 1 795 452 305 65 13 chrX 27598352 27598505 -139051791 - B3 SINE B2 -53 163 3 1 795 369 0 0 0 chrX 27598589 27598630 -139051666 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 795 7006 103 24 23 chrX 27598750 27600552 -139049744 - L1_Mus1 LINE L1 0 6567 4778 1 795 7346 79 5 8 chrX 27600534 27601711 -139048585 - L1Md_F2 LINE L1 -1 6581 5405 1 795 17634 159 11 16 chrX 27601709 27605043 -139045253 - L1_Mus1 LINE L1 -1075 4808 1492 1 795 6751 158 27 10 chrX 27605041 27606371 -139043925 - L1_Mus3 LINE L1 -690 5948 4601 1 795 607 207 9 0 chrX 27606370 27606481 -139043815 - Lx4A LINE L1 -228 6830 6719 1 795 2093 262 69 15 chrX 27607337 27607949 -139042347 - Lx2B LINE L1 -14 6986 6342 1 795 3091 158 66 13 chrX 27607946 27608106 -139042190 + L1_Mur2 LINE L1 4537 4730 -1147 1 795 204 67 0 0 chrX 27608106 27608136 -139042160 + (TAA)n Simple_repeat Simple_repeat 1 30 0 1 795 3091 158 66 13 chrX 27608136 27608585 -139041711 + L1_Mur2 LINE L1 4731 5178 -699 1 795 458 121 97 39 chrX 27608758 27608832 -139041464 - URR1B DNA MER1_type 0 225 150 1 795 306 0 0 0 chrX 27608832 27608866 -139041430 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 795 458 121 97 39 chrX 27608866 27608894 -139041402 - URR1B DNA MER1_type -76 149 117 1 795 314 263 45 0 chrX 27609268 27609395 -139040901 + RLTR1B LTR ERV1 259 454 -170 1 795 24 32 0 0 chrX 27609533 27609564 -139040732 + AT_rich Low_complexity Low_complexity 1 31 0 1 795 1819 235 8 17 chrX 27609704 27610303 -139039993 - Lx6 LINE L1 -1352 6108 5512 1 795 24537 49 150 3 chrX 27610302 27615609 -139034687 - L1Md_T LINE L1 -1 6584 335 1 795 1338 240 44 2 chrX 27615605 27616015 -139034281 - Lx6 LINE L1 -349 5531 5105 1 795 1117 220 37 9 chrX 27616020 27616346 -139033950 - Lx6 LINE L1 -2035 3845 3511 1 795 644 240 57 33 chrX 27616346 27616510 -139033786 - Lx6 LINE L1 -3397 2480 2324 1 795 495 0 0 0 chrX 27616510 27616565 -139033731 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 795 644 240 57 33 chrX 27616565 27616611 -139033685 - Lx6 LINE L1 -3554 2323 2266 1 795 650 322 50 18 chrX 27616617 27616835 -139033461 - ORR1D2 LTR MaLR -145 225 1 1 795 423 389 4 0 chrX 27616837 27617071 -139033225 + Lx8 LINE L1 6956 7190 -283 1 795 941 287 47 22 chrX 27617176 27617536 -139032760 + ORR1D2 LTR MaLR 1 369 -1 1 795 426 271 8 23 chrX 27617691 27617823 -139032473 + Lx8 LINE L1 6640 6769 -704 1 795 233 244 12 25 chrX 27618078 27618158 -139032138 - Lx9 LINE L1 -1398 6246 6168 1 795 225 442 0 0 chrX 27618211 27618349 -139031947 + RMER1C Other Other 535 672 -670 1 795 260 379 0 0 chrX 27618672 27618788 -139031508 + RMER1C Other Other 537 652 -690 1 795 231 441 4 4 chrX 27618896 27619126 -139031170 + RMER1C Other Other 412 641 -701 1 795 294 162 0 0 chrX 27619546 27619620 -139030676 + A-rich Low_complexity Low_complexity 1 74 0 1 795 260 358 6 16 chrX 27620887 27621100 -139029196 + RMER1C Other Other 626 874 -468 1 795 33203 82 5 12 chrX 27621466 27627869 -139022427 - L1Md_F3 LINE L1 0 6584 233 1 795 213 65 0 0 chrX 27629073 27629104 -139021192 + (A)n Simple_repeat Simple_repeat 1 31 0 1 795 236 412 23 14 chrX 27629672 27630019 -139020277 + RMER1C Other Other 370 835 -507 1 795 469 390 35 15 chrX 27630523 27630971 -139019325 + RMER1C Other Other 375 874 -468 1 795 351 0 0 0 chrX 27631449 27631488 -139018808 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 795 312 437 26 13 chrX 27631848 27632387 -139017909 + RMER1C Other Other 378 833 -509 1 795 261 410 26 1 chrX 27632519 27632699 -139017597 + RMER1C Other Other 419 724 -618 1 795 275 422 22 28 chrX 27633332 27633875 -139016421 + RMER1C Other Other 378 726 -616 1 796 1870 233 56 31 chrX 27685905 27686427 -138963869 + RLTR40 LTR ERVK 22 556 -261 1 796 347 194 10 0 chrX 27686429 27686527 -138963769 + GA-rich Low_complexity Low_complexity 2 100 0 1 796 651 299 43 36 chrX 27686527 27686717 -138963579 + RLTR40 LTR ERVK 563 752 -65 1 796 6161 93 34 2 chrX 27686717 27687131 -138963165 - RLTR13B1 LTR ERVK 0 893 476 1 796 360 0 0 0 chrX 27687131 27687171 -138963125 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 796 6161 93 34 2 chrX 27687171 27687622 -138962674 - RLTR13B1 LTR ERVK -418 475 3 1 796 651 299 43 36 chrX 27687622 27687684 -138962612 + RLTR40 LTR ERVK 753 817 0 1 796 410 0 0 20 chrX 27687875 27687926 -138962370 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1 796 696 226 57 10 chrX 27689457 27689649 -138960647 - Lx9 LINE L1 -243 7401 7201 1 796 398 191 0 0 chrX 27689649 27689733 -138960563 + Lx9 LINE L1 7554 7637 -7 1 796 473 287 13 0 chrX 27689742 27689892 -138960404 + Lx5 LINE L1 6825 6976 -74 1 796 393 22 0 0 chrX 27689900 27689946 -138960350 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 1 796 597 231 35 14 chrX 27689958 27690103 -138960193 + B1_Mur2 SINE Alu 1 148 -1 1 796 1977 148 27 0 chrX 27690132 27690470 -138959826 + L1_Mus3 LINE L1 6284 6630 -8 1 796 28 48 0 0 chrX 27690483 27690525 -138959771 + AT_rich Low_complexity Low_complexity 1 42 0 1 796 681 244 7 12 chrX 27690652 27690837 -138959459 + Lx4B LINE L1 6809 6994 -64 1 796 2685 179 32 2 chrX 27690899 27691491 -138958805 - L1_Mur2 LINE L1 -1176 4701 4092 1 796 10143 144 33 23 chrX 27691491 27692861 -138957435 - RLTR22_Mur LTR ERVK 0 1848 461 1 796 430 57 0 28 chrX 27692861 27692933 -138957363 + (TAG)n Simple_repeat Simple_repeat 3 72 0 1 796 10143 144 33 23 chrX 27692933 27693392 -138956904 - RLTR22_Mur LTR ERVK -1388 460 1 1 796 805 153 199 0 chrX 27693392 27693633 -138956663 - L1_Mur2 LINE L1 -1782 4095 3807 1 796 1358 142 25 4 chrX 27693677 27693918 -138956378 + L1_Mus4 LINE L1 6391 6636 0 1 796 180 0 0 0 chrX 27694407 27694427 -138955869 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 1 796 24 0 0 0 chrX 27695820 27695844 -138954452 + AT_rich Low_complexity Low_complexity 1 24 0 1 796 367 261 22 7 chrX 27696129 27696264 -138954032 + L1_Mur2 LINE L1 4334 4470 -1407 1 796 1581 44 44 0 chrX 27696289 27696494 -138953802 + L1Md_F2 LINE L1 6357 6570 -12 1 796 1254 194 86 57 chrX 27696494 27696924 -138953372 + RLTR21 LTR ERVK 706 1251 -153 1 796 2822 100 7 2 chrX 27697165 27697584 -138952712 - BGLII LTR ERVK 0 421 1 1 796 2411 213 119 8 chrX 27697584 27698501 -138951795 - MYSERV16_I-int LTR ERVK 0 2326 1308 1 796 1881 216 88 78 chrX 27698523 27698858 -138951438 - RMER3D-int LTR ERVK -1164 1678 1384 1 796 3192 53 5 0 chrX 27698858 27699252 -138951044 + MTA_Mm LTR MaLR 1 396 0 1 796 1881 216 88 78 chrX 27699252 27699572 -138950724 - RMER3D-int LTR ERVK -1459 1383 1016 1 796 483 158 11 68 chrX 27699619 27699809 -138950487 + CT-rich Low_complexity Low_complexity 2 180 0 1 796 361 130 38 25 chrX 27699822 27699901 -138950395 - RMER3D-int LTR ERVK -2274 568 489 1 796 556 179 16 35 chrX 27699973 27700120 -138950176 - RMER3D-int LTR ERVK -2069 773 650 1 796 600 212 25 40 chrX 27700206 27700407 -138949889 - RMER3D-int LTR ERVK -1993 849 652 1 796 445 145 0 0 chrX 27700422 27700510 -138949786 - RMER3D-int LTR ERVK -2278 564 489 1 796 1775 267 50 19 chrX 27700774 27701350 -138948946 - Lx7 LINE L1 -1042 6654 6061 1 796 607 241 69 47 chrX 27701386 27701661 -138948635 - Lx7 LINE L1 -1559 6137 5857 1 796 1101 260 82 0 chrX 27702060 27702352 -138947944 - MER2 DNA MER2_type -24 321 6 1 796 851 162 62 19 chrX 27702517 27702725 -138947571 + L1_Mm LINE L1 5234 5450 -433 1 796 507 259 35 139 chrX 27702771 27703220 -138947076 + L1VL1 LINE L1 273 608 -6030 1 796 452 238 16 8 chrX 27703280 27703407 -138946889 + L1Md_F LINE L1 578 705 -5814 1 796 2111 200 11 0 chrX 27703418 27703892 -138946404 + L1Md_F LINE L1 630 1108 -5411 1 796 18299 187 22 68 chrX 27703889 27708332 -138941964 + L1VL1 LINE L1 1071 5237 -649 1 796 642 26 0 0 chrX 27708332 27708408 -138941888 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 796 18299 189 21 70 chrX 27708408 27708900 -138941396 + L1VL1 LINE L1 5238 5740 -146 1 796 1615 63 13 5 chrX 27708900 27709124 -138941172 + MT2_Mm LTR ERVL 268 493 0 1 796 957 128 0 0 chrX 27709136 27709292 -138941004 - L1_Mm LINE L1 -1522 4361 4206 1 796 521 197 74 0 chrX 27709285 27709407 -138940889 - Lx3C LINE L1 -553 6423 6293 1 796 1638 193 9 3 chrX 27709395 27709738 -138940558 - L1_Mur1 LINE L1 -189 5697 5353 1 796 10144 185 30 8 chrX 27709750 27712732 -138937564 + Lx4B LINE L1 3725 6782 -276 1 796 286 371 71 12 chrX 27712993 27713233 -138937063 - RMER1C Other Other -494 848 595 1 796 280 407 20 15 chrX 27713401 27713598 -138936698 - RMER1C Other Other -585 757 560 1 796 390 419 12 0 chrX 27713707 27713955 -138936341 - RMER1C Other Other -671 671 421 1 796 243 421 19 16 chrX 27714242 27714500 -138935796 - RMER1C Other Other -620 722 464 1 796 273 425 12 32 chrX 27714616 27714961 -138935335 - RMER1C Other Other -496 846 509 1 796 288 390 17 50 chrX 27715597 27715778 -138934518 - RMER1C Other Other -691 651 383 1 796 256 433 18 14 chrX 27717151 27717430 -138932866 - RMER1C Other Other -478 864 585 1 796 387 0 0 0 chrX 27717818 27717861 -138932435 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 796 254 328 36 29 chrX 27717977 27718115 -138932181 - RMER1C Other Other -753 589 451 1 796 412 403 41 19 chrX 27718332 27718782 -138931514 - RMER1C Other Other -468 874 412 1 796 282 422 23 17 chrX 27719285 27719632 -138930664 - RMER1C Other Other -507 835 487 1 796 294 29 0 0 chrX 27720220 27720255 -138930041 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1 796 30738 88 4 14 chrX 27721462 27726877 -138923419 + L1Md_F3 LINE L1 233 5586 -297 1 796 7666 70 6 0 chrX 27726877 27727869 -138922427 + L1Md_F3 LINE L1 5587 6584 0 1 796 428 62 24 24 chrX 27729714 27729797 -138920499 + (TTTTG)n Simple_repeat Simple_repeat 3 85 0 1 796 288 372 0 0 chrX 27730556 27730677 -138919619 - RMER1C Other Other -685 657 537 1 796 458 256 8 23 chrX 27731526 27731658 -138918638 - Lx8 LINE L1 -704 6769 6640 1 796 906 284 35 35 chrX 27731813 27732181 -138918115 - ORR1D2 LTR MaLR -2 368 1 1 796 423 389 4 0 chrX 27732286 27732520 -138917776 - Lx8 LINE L1 -283 7190 6956 1 796 627 327 47 14 chrX 27732522 27732733 -138917563 + ORR1D2 LTR MaLR 1 218 -152 1 796 604 264 38 24 chrX 27732746 27732794 -138917502 + Lx6 LINE L1 2265 2312 -3565 1 796 441 0 0 0 chrX 27732794 27732843 -138917453 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 796 604 264 38 24 chrX 27732843 27733007 -138917289 + Lx6 LINE L1 2313 2479 -3398 1 796 1112 217 40 12 chrX 27733007 27733333 -138916963 + Lx6 LINE L1 3510 3844 -2033 1 796 2754 245 21 16 chrX 27733338 27734332 -138915964 + Lx6 LINE L1 5105 6108 -1352 1 796 25 31 0 0 chrX 27734472 27734504 -138915792 + AT_rich Low_complexity Low_complexity 1 32 0 1 796 354 284 71 47 chrX 27734642 27734812 -138915484 - RLTR1B LTR ERV1 -173 339 166 1 796 428 150 78 20 chrX 27735145 27735172 -138915124 + URR1B DNA MER1_type 118 144 -81 1 796 342 0 0 0 chrX 27735172 27735210 -138915086 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 796 428 150 78 20 chrX 27735210 27735284 -138915012 + URR1B DNA MER1_type 145 224 -1 1 796 2957 154 66 13 chrX 27735457 27735906 -138914390 - L1_Mur2 LINE L1 -699 5178 4731 2 796 216 0 0 0 chrX 27735906 27735930 -138914366 + (TTA)n Simple_repeat Simple_repeat 1 24 0 2 796 2957 154 66 13 chrX 27735930 27736090 -138914206 - L1_Mur2 LINE L1 -1147 4730 4537 2 796 2016 258 68 3 chrX 27736087 27736693 -138913603 + Lx2B LINE L1 6342 6986 -14 2 796 571 198 9 0 chrX 27737546 27737657 -138912639 + Lx4A LINE L1 6719 6830 -228 2 796 6447 156 27 6 chrX 27737656 27738978 -138911318 + L1_Mus3 LINE L1 4601 5948 -690 2 796 22411 145 14 54 chrX 27738976 27742480 -138907816 + L1_Mus1 LINE L1 1492 4795 -1088 2 796 7223 80 5 14 chrX 27742480 27743484 -138906812 + L1Md_F2 LINE L1 5588 6582 0 2 796 22411 119 21 39 chrX 27743484 27745256 -138905040 + L1_Mus1 LINE L1 4796 6567 0 2 796 261 0 0 0 chrX 27745376 27745405 -138904891 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 796 234 202 54 18 chrX 27745494 27745572 -138904724 - LTRIS_Mus LTR ERV1 0 587 544 2 796 24951 34 20 0 chrX 27745572 27748991 -138901305 - RLTR6-int LTR ERV1 -4213 3565 2 2 796 1881 143 244 30 chrX 27748993 27749460 -138900836 - RLTR6_Mm LTR ERV1 -51 603 37 2 796 481 293 66 13 chrX 27749574 27749726 -138900570 + B3 SINE B2 4 163 -53 2 796 233 278 0 65 chrX 27749730 27749807 -138900489 + B4A SINE B4 82 153 -139 2 796 250 322 34 22 chrX 27749811 27749900 -138900396 + B3 SINE B2 113 202 -14 2 796 267 350 20 10 chrX 27750804 27750905 -138899391 - PB1D10 SINE Alu -15 102 1 2 796 287 279 15 0 chrX 27750841 27750909 -138899387 - B4A SINE B4 -142 150 82 2 796 588 95 0 0 chrX 27751513 27751597 -138898699 + (CATATA)n Simple_repeat Simple_repeat 3 86 0 2 796 24015 144 7 1 chrX 27752230 27757391 -138892905 - L1_Mus3 LINE L1 -4 6634 1445 2 796 291 339 49 8 chrX 27757642 27757764 -138892532 + B1F SINE Alu 20 146 -3 2 796 213 296 0 0 chrX 27758068 27758112 -138892184 - ID4 SINE ID -36 47 4 2 796 230 310 127 0 chrX 27758345 27758416 -138891880 + ID4 SINE ID 4 83 0 2 796 371 251 160 10 chrX 27758681 27758881 -138891415 + B4 SINE B4 1 230 -62 2 796 1052 91 7 0 chrX 27758882 27759025 -138891271 + B1_Mus1 SINE Alu 4 147 -1 2 796 841 296 14 24 chrX 27759280 27759491 -138890805 + B3 SINE B2 2 210 -6 2 796 273 274 101 28 chrX 27760274 27760383 -138889913 - B1F SINE Alu -32 117 1 2 796 241 325 47 70 chrX 27760383 27760403 -138889893 - ID_B1 SINE B4 -29 195 70 2 796 273 269 95 69 chrX 27760398 27760514 -138889782 - B1F SINE Alu -2 147 29 2 796 561 15 0 0 chrX 27760833 27760899 -138889397 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 796 519 17 0 0 chrX 27760900 27760960 -138889336 + (GA)n Simple_repeat Simple_repeat 2 61 0 2 796 5314 138 19 1 chrX 27762256 27763107 -138887189 - Lx LINE L1 -2 6652 5787 2 796 15928 159 19 54 chrX 27763108 27765044 -138885252 - L1VL2 LINE L1 -1127 4756 2824 2 796 570 15 0 0 chrX 27765044 27765111 -138885185 + (TA)n Simple_repeat Simple_repeat 2 68 0 2 796 15928 159 19 54 chrX 27765111 27765199 -138885097 - L1VL2 LINE L1 -3060 2823 2808 2 796 955 119 0 0 chrX 27765199 27765333 -138884963 - B1_Mus2 SINE Alu -13 134 1 2 796 15928 176 33 60 chrX 27765333 27768023 -138882273 - L1VL2 LINE L1 -3076 2807 300 2 796 22 56 0 0 chrX 27768116 27768152 -138882144 + AT_rich Low_complexity Low_complexity 1 36 0 2 796 672 326 93 30 chrX 27768161 27768430 -138881866 - B4A SINE B4 -3 289 4 2 796 958 227 19 0 chrX 27768663 27768870 -138881426 - B3 SINE B2 -5 211 1 2 796 379 283 67 0 chrX 27769016 27769136 -138881160 - B1F SINE Alu -1 148 21 2 796 427 291 10 0 chrX 27769196 27769299 -138880997 - B3 SINE B2 -15 201 98 2 796 4599 132 15 18 chrX 27770141 27770935 -138879361 - YREP_Mm Unknown Unknown -35 1777 986 2 796 334 332 111 34 chrX 27770940 27771174 -138879122 - L2 LINE L2 -1119 2300 2049 2 796 228 86 0 0 chrX 27771270 27771305 -138878991 + (CCA)n Simple_repeat Simple_repeat 1 35 0 2 796 549 339 40 15 chrX 27771351 27771558 -138878738 + B4A SINE B4 83 290 -2 2 796 228 362 28 21 chrX 27772029 27772170 -138878126 - L2 LINE L2 -1760 1659 1518 2 796 5271 123 71 29 chrX 27773508 27774429 -138875867 - Lx3A LINE L1 -7 6974 6016 2 796 305 307 56 70 chrX 27774881 27775165 -138875131 + RMER17C LTR ERVK 83 362 -48 2 796 812 120 35 21 chrX 27775444 27775589 -138874707 + L1_Mus1 LINE L1 6421 6567 0 2 796 3587 79 8 30 chrX 27775593 27776420 -138873876 - L1Md_A LINE L1 -4124 1759 964 2 796 31885 81 6 41 chrX 27776415 27779523 -138870773 - L1Md_F2 LINE L1 -1 6581 3464 2 796 1232 90 73 0 chrX 27779523 27779701 -138870595 - B2_Mm2 SINE B2 0 195 5 2 796 31885 108 16 49 chrX 27779701 27783133 -138867163 - L1Md_F2 LINE L1 -2420 3463 277 2 796 1385 179 52 0 chrX 27783133 27783384 -138866912 - L1VL1 LINE L1 -6156 266 3 2 796 22560 136 7 4 chrX 27783385 27784224 -138866072 + L1_Mus1 LINE L1 2294 3132 -2751 2 796 210 37 0 0 chrX 27784224 27784251 -138866045 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 796 22560 124 6 3 chrX 27784251 27787243 -138863053 + L1_Mus1 LINE L1 3133 6136 -431 2 99 1236 70 6 0 chrX 27787243 27787400 -138862896 + L1_Mus1 LINE L1 6410 6567 0 2 797 1627 195 20 90 chrX 27787402 27787858 -138862438 + L1_Mur2 LINE L1 3320 3743 -2134 2 797 810 321 49 31 chrX 27787833 27788267 -138862029 - Lx6 LINE L1 -164 7296 6506 2 797 347 276 22 7 chrX 27788272 27788407 -138861889 - L1_Mur2 LINE L1 -1407 4470 4334 2 797 24 0 0 0 chrX 27788691 27788715 -138861581 + AT_rich Low_complexity Low_complexity 1 24 0 2 797 180 0 0 0 chrX 27790107 27790127 -138860169 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 2 797 11848 35 0 1 chrX 27790498 27792553 -138857743 - L1Md_T LINE L1 0 6582 4529 2 797 1439 138 29 4 chrX 27792585 27792825 -138857471 - L1_Mus4 LINE L1 0 6636 6391 2 797 1269 199 17 14 chrX 27792867 27793157 -138857139 + L1_Mur2 LINE L1 3805 4095 -1782 2 797 9979 141 39 25 chrX 27793157 27793604 -138856692 + RLTR22_Mur LTR ERVK 1 444 -1404 2 797 595 90 0 20 chrX 27793604 27793706 -138856590 + (CTA)n Simple_repeat Simple_repeat 3 102 0 2 797 9979 141 39 25 chrX 27793706 27795081 -138855215 + RLTR22_Mur LTR ERVK 445 1847 -1 2 797 2979 175 37 2 chrX 27795081 27795670 -138854626 + L1_Mur2 LINE L1 4092 4701 -1176 2 797 756 261 19 14 chrX 27795706 27795920 -138854376 - Lx4B LINE L1 -35 7023 6809 2 797 227 263 0 0 chrX 27795928 27795985 -138854311 + T-rich Low_complexity Low_complexity 4 60 0 2 797 26 50 0 0 chrX 27796051 27796091 -138854205 + AT_rich Low_complexity Low_complexity 1 40 0 2 797 2072 159 45 0 chrX 27796103 27796456 -138853840 - L1_Mus3 LINE L1 -8 6630 6262 2 797 717 208 34 14 chrX 27796478 27796624 -138853672 - B1_Mur3 SINE Alu 0 149 1 2 797 315 0 0 0 chrX 27796639 27796674 -138853622 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 2 797 530 287 13 0 chrX 27796682 27796832 -138853464 - Lx5 LINE L1 -74 6976 6825 2 797 435 191 0 0 chrX 27796841 27796925 -138853371 - Lx9 LINE L1 -7 7637 7554 2 797 715 228 60 11 chrX 27796925 27797107 -138853189 + Lx9 LINE L1 7201 7391 -253 2 797 189 0 0 0 chrX 27798304 27798325 -138851971 + (T)n Simple_repeat Simple_repeat 1 21 0 2 797 1347 27 0 0 chrX 27798325 27798472 -138851824 - B1_Mus2 SINE Alu 0 147 1 2 797 234 0 0 0 chrX 27798845 27798871 -138851425 + (TTC)n Simple_repeat Simple_repeat 1 26 0 2 797 288 0 0 0 chrX 27798871 27798903 -138851393 + (TTA)n Simple_repeat Simple_repeat 2 33 0 2 797 491 262 59 64 chrX 27799094 27799156 -138851140 - RLTR40 LTR ERVK 0 817 753 2 797 6663 96 24 5 chrX 27799156 27800032 -138850264 + RLTR13B1 LTR ERVK 1 893 0 2 797 491 262 59 64 chrX 27800032 27800173 -138850123 - RLTR40 LTR ERVK -65 752 615 2 797 551 147 9 0 chrX 27800187 27800303 -138849993 + CT-rich Low_complexity Low_complexity 2 118 0 2 797 1810 215 63 44 chrX 27800303 27800828 -138849468 - RLTR40 LTR ERVK -261 556 22 2 797 3466 206 44 17 chrX 27802271 27803016 -138847280 + RLTR14-int LTR ERV1 2436 3200 -2117 2 797 719 219 0 0 chrX 27803047 27803170 -138847126 - MMETn-int LTR ERVK -745 6661 6539 2 797 3190 171 13 41 chrX 27803165 27804084 -138846212 - MMETn-int LTR ERVK -1703 3141 2541 2 797 222 116 0 0 chrX 27804084 27804127 -138846169 + (T)n Simple_repeat Simple_repeat 1 43 0 2 797 385 200 0 87 chrX 27804128 27804159 -138846137 - MMETn-int LTR ERVK -2267 2577 2555 2 797 5156 56 0 7 chrX 27804159 27804768 -138845528 - L1Md_F2 LINE L1 -12 6570 5966 2 797 385 177 271 0 chrX 27804768 27804864 -138845432 - MMETn-int LTR ERVK -2290 2554 2473 2 797 7028 89 1 7 chrX 27804923 27805865 -138844431 + L1Md_F LINE L1 90 1025 -5494 2 797 31788 98 5 21 chrX 27805866 27811229 -138839067 + L1Md_F2 LINE L1 315 5587 -296 2 797 8407 49 2 4 chrX 27811230 27812214 -138838082 + L1Md_F2 LINE L1 5589 6570 -12 2 797 1050 210 155 16 chrX 27812240 27812550 -138837746 - ETnERV2-int LTR ERVK -2295 4949 4597 2 797 3872 131 47 3 chrX 27812536 27813157 -138837139 - ETnERV2-int LTR ERVK -3318 4088 3441 2 797 841 142 6 105 chrX 27813382 27813563 -138836733 - MMETn-int LTR ERVK -2654 2190 2028 2 797 557 112 0 0 chrX 27813563 27813637 -138836659 + L1_Mm LINE L1 5513 5615 -2170 2 797 8062 70 1 10 chrX 27813637 27814628 -138835668 + L1Md_F2 LINE L1 5587 6568 -14 2 797 287 286 21 21 chrX 27814628 27814646 -138835650 + L1_Mm LINE L1 5616 5633 -2152 2 797 2902 187 40 28 chrX 27814650 27815283 -138835013 - ETnERV2-int LTR ERVK -4271 3135 2496 2 797 1960 176 64 12 chrX 27815304 27815723 -138834573 - ETnERV2-int LTR ERVK -5318 2088 1648 2 797 816 11 0 0 chrX 27815730 27815823 -138834473 + (GAA)n Simple_repeat Simple_repeat 2 94 0 2 797 292 167 0 0 chrX 27815826 27815880 -138834416 - RMER16-int LTR ERVK -5212 194 141 2 797 346 146 0 18 chrX 27816315 27816371 -138833925 - ETnERV2-int LTR ERVK -6278 1128 1074 2 797 765 252 12 104 chrX 27816361 27816689 -138833607 - ETnERV2-int LTR ERVK -4545 299 2 2 797 1248 170 190 48 chrX 27816691 27817049 -138833247 - RLTR9E LTR ERVK 0 409 1 2 797 8855 189 105 26 chrX 27817049 27819013 -138831283 + RLTR14-int LTR ERV1 3195 5312 -5 2 797 1651 193 12 21 chrX 27819038 27819366 -138830930 + RLTR14 LTR ERV1 7 331 -51 2 797 1532 137 0 0 chrX 27819366 27819592 -138830704 - L1_Mus3 LINE L1 -185 5698 5473 2 797 4530 108 24 0 chrX 27819594 27820258 -138830038 + L1_Mus3 LINE L1 5712 6391 -247 2 797 1348 284 14 49 chrX 27820263 27820693 -138829603 + RodERV21-int LTR ERV1 2304 2718 -2273 2 797 498 347 27 42 chrX 27820818 27821296 -138829000 + RodERV21-int LTR ERV1 3586 4056 -3035 2 797 269 26 26 0 chrX 27821455 27821493 -138828803 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 797 675 227 96 29 chrX 27822158 27822367 -138827929 + LTRIS4 LTR ERV1 285 507 0 2 797 691 241 51 79 chrX 27822369 27822920 -138827376 + MuRRS4-int LTR ERV1 5 498 -4565 2 797 1201 240 66 22 chrX 27823255 27823575 -138826721 + MuRRS4-int LTR ERV1 342 675 -4388 2 797 4347 128 25 10 chrX 27823604 27824290 -138826006 + RMER16-int LTR ERVK 666 1361 -4045 2 797 337 172 80 34 chrX 27824379 27824497 -138825799 + RMER16-int LTR ERVK 1386 1448 -3958 2 797 622 145 92 17 chrX 27824481 27824600 -138825696 + MuRRS4-int LTR ERV1 750 877 -4186 2 797 753 192 0 79 chrX 27824600 27824764 -138825532 - LSU-rRNA_Hsa rRNA rRNA -1371 3664 3514 2 797 1471 272 33 7 chrX 27825006 27825428 -138824868 + MuRRS4-int LTR ERV1 1012 1444 -3619 2 797 5276 155 63 24 chrX 27825450 27827757 -138822539 + MuRRS4-int LTR ERV1 1104 4271 -792 2 797 755 196 0 7 chrX 27827748 27827897 -138822399 + MuRRS4-int LTR ERV1 4788 4935 -128 2 797 1180 273 3 7 chrX 27827897 27828207 -138822089 + MuRRS4-int LTR ERV1 4637 4945 -118 2 797 3681 64 20 12 chrX 27828681 27829173 -138821123 - LTRIS2 LTR ERV1 0 564 69 2 797 1099 167 54 25 chrX 27829173 27829413 -138820883 - RLTR1B-int LTR ERV1 -26 5037 4791 3 797 1126 152 58 5 chrX 27829639 27829900 -138820396 - RLTR1B-int LTR ERV1 -486 2813 2669 3 797 5255 85 151 88 chrX 27829887 27831129 -138819167 - RLTR1B-int LTR ERV1 -744 2555 1260 3 797 183 42 0 0 chrX 27831129 27831153 -138819143 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 797 2641 198 115 43 chrX 27831153 27832049 -138818247 - RLTR1B-int LTR ERV1 -3266 1797 835 3 797 4126 153 52 18 chrX 27832053 27832758 -138817538 - RMER16-int LTR ERVK -3988 1418 690 3 797 966 126 90 17 chrX 27832744 27832922 -138817374 - RMER16-int LTR ERVK -5075 331 141 3 797 682 81 0 2 chrX 27833266 27833375 -138816921 - RLTR1B-int LTR ERV1 -3006 293 139 3 797 3540 76 20 18 chrX 27833586 27834081 -138816215 - LTRIS2 LTR ERV1 0 564 69 3 797 3021 325 37 44 chrX 27834196 27835806 -138814490 + RodERV21-int LTR ERV1 2905 4500 -491 3 797 2446 123 35 54 chrX 27835806 27836234 -138814062 + RLTR9B2 LTR ERVK 1 420 0 3 797 3021 325 37 44 chrX 27836234 27836525 -138813771 + RodERV21-int LTR ERV1 4501 4793 -198 3 797 259 260 30 30 chrX 27836593 27836692 -138813604 + RMER17C-int LTR ERVK 3138 3236 -2 3 797 850 145 13 46 chrX 27836936 27837088 -138813208 + B1_Mus1 SINE Alu 2 148 0 3 797 226 196 107 10 chrX 27837231 27837334 -138812962 + L1_Rod LINE L1 5260 5372 -475 3 797 2243 214 65 29 chrX 27837334 27837888 -138812408 - RLTR31A_Mm LTR ERVK 0 584 11 3 797 422 222 28 43 chrX 27837907 27838048 -138812248 + L1_Rod LINE L1 5396 5534 -313 3 797 209 169 49 33 chrX 27838213 27838274 -138812022 + CT-rich Low_complexity Low_complexity 2 63 0 3 797 1212 309 37 43 chrX 27839593 27840133 -138810163 + RodERV21-int LTR ERV1 1116 1652 -3339 3 797 6833 73 6 8 chrX 27840145 27841460 -138808836 - L1Md_F2 LINE L1 -2 6580 5274 3 797 3545 154 18 23 chrX 27841461 27841585 -138808711 + L1_Mus3 LINE L1 5978 6100 -538 3 797 2711 67 0 3 chrX 27841585 27841928 -138808368 + ORR1A1 LTR MaLR 1 342 -4 3 797 3545 154 18 23 chrX 27841928 27842459 -138807837 + L1_Mus3 LINE L1 6101 6630 -8 3 797 1032 203 28 3 chrX 27842460 27842742 -138807554 + L1_Mur3 LINE L1 2999 3287 -2593 3 797 1182 218 14 21 chrX 27842757 27843047 -138807249 + Lx7 LINE L1 5617 5904 -1792 3 797 2097 201 17 15 chrX 27843057 27843466 -138806830 + MTC LTR MaLR 12 421 0 3 797 400 317 26 18 chrX 27843472 27843700 -138806596 + Lx6 LINE L1 5905 6134 -1326 3 797 233 307 0 17 chrX 27843700 27843816 -138806480 + Lx6 LINE L1 7332 7445 -15 3 797 1497 215 24 40 chrX 27844212 27844541 -138805755 + RLTR21 LTR ERVK 1 324 -1248 3 797 198 0 0 0 chrX 27844558 27844580 -138805716 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 3 797 692 184 17 51 chrX 27844588 27844765 -138805531 + RLTR21 LTR ERVK 547 717 -855 3 797 14378 134 211 17 chrX 27844768 27846311 -138803985 + L1Md_F2 LINE L1 446 1958 -3925 3 797 211 71 48 0 chrX 27846311 27846353 -138803943 + (CAA)n Simple_repeat Simple_repeat 2 45 0 3 797 14378 81 421 2 chrX 27846353 27848691 -138801605 + L1Md_F2 LINE L1 1959 5586 -297 3 797 7314 77 9 1 chrX 27848691 27849667 -138800629 + L1Md_F2 LINE L1 5587 6570 -12 3 797 1269 214 70 55 chrX 27849668 27850069 -138800227 + RLTR21 LTR ERVK 706 1112 -460 3 797 2824 98 7 7 chrX 27850339 27850760 -138799536 - BGLII LTR ERVK 0 421 1 3 797 2351 228 46 52 chrX 27850761 27851682 -138798614 - RMER3D-int LTR ERVK -1 2841 1927 3 797 2127 196 87 78 chrX 27851705 27852040 -138798256 - RMER3D-int LTR ERVK -1164 1678 1384 3 797 3342 38 2 0 chrX 27852040 27852435 -138797861 + MTA_Mm LTR MaLR 1 396 0 3 797 2127 196 87 78 chrX 27852435 27852756 -138797540 - RMER3D-int LTR ERVK -1459 1383 1016 3 797 503 184 0 63 chrX 27852803 27852994 -138797302 + CT-rich Low_complexity Low_complexity 2 180 0 3 797 547 229 29 40 chrX 27853012 27853305 -138796991 - RMER3D-int LTR ERVK -2038 804 354 3 797 494 225 35 40 chrX 27853391 27853590 -138796706 - RMER3D-int LTR ERVK -1993 849 652 3 797 478 133 0 0 chrX 27853605 27853693 -138796603 - RMER3D-int LTR ERVK -2278 564 489 3 797 1807 262 50 21 chrX 27853957 27854534 -138795762 - Lx7 LINE L1 -1042 6654 6061 3 797 603 265 49 35 chrX 27854560 27854845 -138795451 - Lx7 LINE L1 -1551 6145 5857 3 797 653 297 29 68 chrX 27855147 27855353 -138794943 + B3A SINE B2 1 198 0 3 797 417 39 0 0 chrX 27855421 27855472 -138794824 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 3 797 809 283 10 0 chrX 27855556 27855761 -138794535 - B3 SINE B2 -9 207 1 3 797 742 177 69 16 chrX 27855904 27856093 -138794203 + L1_Mm LINE L1 5252 5450 -433 3 797 509 289 15 116 chrX 27856130 27856588 -138793708 + L1_Mus1 LINE L1 264 608 -6030 3 797 464 259 21 7 chrX 27856643 27856787 -138793509 + L1Md_F LINE L1 573 718 -5801 3 797 1903 206 23 0 chrX 27856784 27857254 -138793042 + L1Md_F LINE L1 628 1108 -5411 3 797 15944 194 11 59 chrX 27857251 27863078 -138787218 + L1_Mus1 LINE L1 1071 6567 0 3 797 1403 204 16 3 chrX 27863091 27863405 -138786891 + Lx2 LINE L1 5823 6140 -857 3 797 3190 173 49 10 chrX 27863407 27864340 -138785956 - Lx3C LINE L1 -660 6316 5353 3 797 9715 184 33 10 chrX 27864352 27867332 -138782964 + Lx4A LINE L1 3725 6779 -279 3 797 324 390 47 29 chrX 27867597 27868203 -138782093 - RMER1C Other Other -458 884 374 3 797 295 424 43 10 chrX 27868311 27868611 -138781685 - RMER1C Other Other -523 819 510 3 797 21 0 0 0 chrX 27868702 27868723 -138781573 + AT_rich Low_complexity Low_complexity 1 21 0 3 797 326 401 26 19 chrX 27868827 27869091 -138781205 - RMER1C Other Other -613 729 464 3 797 414 0 0 0 chrX 27869967 27870013 -138780283 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 797 3375 8 0 0 chrX 27870390 27870768 -138779528 - L1Md_T LINE L1 0 6582 6205 3 797 29226 38 0 0 chrX 27870768 27875630 -138774666 + L1Md_Gf LINE L1 95 5054 -832 3 797 296 383 46 10 chrX 27876450 27876645 -138773651 - RMER1C Other Other -679 663 462 3 797 289 393 32 35 chrX 27877007 27877323 -138772973 - RMER1C Other Other -478 864 550 3 797 469 385 40 17 chrX 27878252 27878598 -138771698 - RMER1C Other Other -468 874 521 3 797 226 437 17 11 chrX 27879102 27879449 -138770847 - RMER1C Other Other -507 835 487 3 797 3363 169 8 3 chrX 27881191 27881839 -138768457 + L1Md_F2 LINE L1 441 1091 -5633 3 797 2553 96 0 2 chrX 27881837 27882232 -138768064 + L1Md_F2 LINE L1 1977 2370 -3513 3 797 19595 72 0 2 chrX 27882243 27884983 -138765313 + L1Md_F2 LINE L1 2850 5585 -298 3 797 7759 63 4 0 chrX 27884984 27885976 -138764320 + L1Md_F2 LINE L1 5587 6582 0 3 797 3871 74 0 0 chrX 27885976 27886809 -138763487 + L1Md_Gf LINE L1 833 1762 -4124 3 797 800 127 35 21 chrX 27886813 27886958 -138763338 - L1_Mus1 LINE L1 0 6567 6421 3 797 294 293 76 76 chrX 27887237 27887514 -138762782 - RMER17C LTR ERVK -48 362 86 3 797 5883 130 6 27 chrX 27887985 27888952 -138761344 + Lx3A LINE L1 6028 6974 -7 3 797 231 320 62 37 chrX 27890265 27890427 -138759869 + L2 LINE L2 1494 1659 -1760 3 797 181 347 52 10 chrX 27890790 27890886 -138759410 + L2 LINE L2 1926 2025 -1394 3 797 574 320 40 15 chrX 27890900 27891107 -138759189 - B4A SINE B4 -2 290 83 3 797 228 86 0 0 chrX 27891153 27891188 -138759108 + (TGG)n Simple_repeat Simple_repeat 1 35 0 3 797 346 325 115 39 chrX 27891284 27891518 -138758778 + L2 LINE L2 2049 2300 -1119 3 797 4625 131 12 19 chrX 27891523 27892320 -138757976 + YREP_Mm Unknown Unknown 986 1777 -35 3 797 454 289 0 0 chrX 27893161 27893265 -138757031 + B3 SINE B2 98 201 -15 3 797 384 252 75 8 chrX 27893325 27893445 -138756851 + B1F SINE Alu 21 148 -1 3 797 912 237 19 0 chrX 27893591 27893798 -138756498 + B3 SINE B2 1 211 -5 3 797 624 327 97 34 chrX 27894031 27894300 -138755996 + B4A SINE B4 4 289 -3 3 797 17317 176 37 49 chrX 27894430 27897123 -138753173 + L1VL2 LINE L1 300 2807 -3076 3 797 893 127 0 0 chrX 27897123 27897257 -138753039 + B1_Mus2 SINE Alu 1 134 -13 3 797 267 93 0 0 chrX 27897267 27897310 -138752986 + (TAA)n Simple_repeat Simple_repeat 2 44 0 3 797 17317 161 20 38 chrX 27897310 27899266 -138751030 + L1VL2 LINE L1 2809 4755 -1128 3 797 5186 145 19 1 chrX 27899267 27900118 -138750178 + Lx LINE L1 5787 6652 -2 3 797 21 0 0 0 chrX 27900118 27900139 -138750157 + AT_rich Low_complexity Low_complexity 1 21 0 3 797 26 88 0 0 chrX 27900182 27900250 -138750046 + AT_rich Low_complexity Low_complexity 1 68 0 3 797 357 24 0 0 chrX 27901414 27901456 -138748840 + (TC)n Simple_repeat Simple_repeat 2 43 0 3 797 435 19 0 0 chrX 27901457 27901509 -138748787 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 797 280 259 95 69 chrX 27901829 27901945 -138748351 + B1F SINE Alu 29 147 -2 3 797 228 333 47 70 chrX 27901940 27901960 -138748336 + ID_B1 SINE B4 70 195 -29 3 797 248 292 101 28 chrX 27901960 27902069 -138748227 + B1F SINE Alu 1 117 -32 3 797 805 275 44 29 chrX 27902852 27903058 -138747238 - B3 SINE B2 -6 210 2 3 797 921 127 14 0 chrX 27903313 27903455 -138746841 - B1_Mus1 SINE Alu -1 147 4 3 797 358 264 162 10 chrX 27903456 27903654 -138746642 - B4 SINE B4 -62 230 3 3 797 21 36 0 0 chrX 27904293 27904321 -138745975 + AT_rich Low_complexity Low_complexity 1 28 0 3 797 321 322 49 8 chrX 27904569 27904691 -138745605 - B1F SINE Alu -3 146 20 3 797 25318 147 6 2 chrX 27904941 27910112 -138740184 + L1_Mus3 LINE L1 1445 6634 -4 3 797 208 147 0 0 chrX 27910543 27910577 -138739719 + (A)n Simple_repeat Simple_repeat 1 34 0 3 797 195 129 0 0 chrX 27910759 27910790 -138739506 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 797 369 0 0 0 chrX 27910792 27910833 -138739463 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 797 315 0 0 0 chrX 27910833 27910868 -138739428 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 797 264 350 20 10 chrX 27911443 27911544 -138738752 + PB1D10 SINE Alu 1 102 -15 3 797 235 352 22 11 chrX 27912448 27912537 -138737759 - B3 SINE B2 -14 202 113 3 797 213 284 0 69 chrX 27912541 27912613 -138737683 - B4A SINE B4 -139 153 87 3 797 452 305 65 13 chrX 27912622 27912775 -138737521 - B3 SINE B2 -53 163 3 3 797 441 0 0 0 chrX 27912859 27912908 -138737388 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 797 6984 103 25 18 chrX 27913028 27914820 -138735476 - L1_Mus1 LINE L1 0 6567 4778 3 797 7250 82 8 6 chrX 27914801 27915979 -138734317 - L1Md_F2 LINE L1 0 6582 5405 3 99 17708 158 11 15 chrX 27915977 27919309 -138730987 - L1_Mus1 LINE L1 -1075 4808 1492 3 798 6778 158 27 7 chrX 27919307 27920631 -138729665 - L1_Mus3 LINE L1 -690 5948 4601 3 798 607 207 9 0 chrX 27920630 27920741 -138729555 - Lx4A LINE L1 -228 6830 6719 3 798 2071 264 69 15 chrX 27921597 27922209 -138728087 - Lx2B LINE L1 -14 6986 6342 3 798 3063 159 66 13 chrX 27922206 27922366 -138727930 + L1_Mur2 LINE L1 4537 4730 -1147 3 798 188 35 35 0 chrX 27922366 27922395 -138727901 + (TAA)n Simple_repeat Simple_repeat 1 30 0 3 798 3063 159 66 13 chrX 27922395 27922844 -138727452 + L1_Mur2 LINE L1 4731 5178 -699 3 798 472 111 97 39 chrX 27923017 27923091 -138727205 - URR1B DNA MER1_type 0 225 150 3 798 432 0 0 0 chrX 27923091 27923139 -138727157 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 798 472 111 97 39 chrX 27923139 27923167 -138727129 - URR1B DNA MER1_type -76 149 117 3 798 327 252 45 0 chrX 27923541 27923668 -138726628 + RLTR1B LTR ERV1 259 454 -170 3 798 24 32 0 0 chrX 27923806 27923837 -138726459 + AT_rich Low_complexity Low_complexity 1 31 0 3 798 1878 237 7 15 chrX 27923977 27924576 -138725720 - Lx6 LINE L1 -1352 6108 5512 3 798 25736 50 150 3 chrX 27924575 27929881 -138720415 - L1Md_T LINE L1 -1 6584 335 4 798 1475 237 44 2 chrX 27929877 27930287 -138720009 - Lx6 LINE L1 -349 5531 5105 3 798 1208 217 37 9 chrX 27930292 27930618 -138719678 - Lx6 LINE L1 -2035 3845 3511 3 798 698 240 57 33 chrX 27930618 27930782 -138719514 - Lx6 LINE L1 -3397 2480 2324 3 798 567 0 0 0 chrX 27930782 27930845 -138719451 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 798 698 240 57 33 chrX 27930845 27930891 -138719405 - Lx6 LINE L1 -3554 2323 2266 3 798 653 322 50 18 chrX 27930897 27931115 -138719181 - ORR1D2 LTR MaLR -145 225 1 4 798 493 389 4 0 chrX 27931117 27931351 -138718945 + Lx8 LINE L1 6956 7190 -283 4 798 956 287 47 22 chrX 27931458 27931818 -138718478 + ORR1D2 LTR MaLR 1 369 -1 4 798 488 289 7 21 chrX 27931973 27932118 -138718178 + Lx8 LINE L1 6640 6782 -691 4 798 22 70 0 0 chrX 27932196 27932239 -138718057 + AT_rich Low_complexity Low_complexity 1 43 0 4 798 253 244 12 25 chrX 27932360 27932440 -138717856 - Lx9 LINE L1 -1398 6246 6168 4 798 271 442 0 0 chrX 27932493 27932631 -138717665 + RMER1C Other Other 535 672 -670 4 798 308 444 6 25 chrX 27932977 27933408 -138716888 + RMER1C Other Other 412 786 -556 4 798 297 164 0 0 chrX 27933828 27933901 -138716395 + A-rich Low_complexity Low_complexity 1 73 0 4 798 244 338 13 0 chrX 27934020 27934097 -138716199 + RMER1C Other Other 599 676 -666 4 798 340 395 43 50 chrX 27934998 27935684 -138714612 + RMER1C Other Other 375 874 -468 4 798 34481 70 4 8 chrX 27935745 27940387 -138709909 - L1Md_F3 LINE L1 0 6584 1970 4 798 207 0 0 0 chrX 27940387 27940410 -138709886 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 798 34481 122 11 28 chrX 27940410 27942173 -138708123 - L1Md_F3 LINE L1 -3914 1969 233 4 798 230 420 0 0 chrX 27943140 27943309 -138706987 + RMER1C Other Other 549 717 -625 4 798 243 0 0 0 chrX 27943377 27943404 -138706892 + (A)n Simple_repeat Simple_repeat 1 27 0 4 798 493 386 35 15 chrX 27944824 27945272 -138705024 + RMER1C Other Other 375 874 -468 4 798 227 403 35 22 chrX 27945398 27945629 -138704667 + RMER1C Other Other 504 737 -605 4 798 522 0 0 0 chrX 27945741 27945799 -138704497 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 798 333 0 0 0 chrX 27945799 27945835 -138704461 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 798 328 436 21 19 chrX 27946195 27946730 -138703566 + RMER1C Other Other 378 833 -509 4 798 261 409 26 0 chrX 27946892 27947046 -138703250 + RMER1C Other Other 419 576 -766 4 798 275 423 22 28 chrX 27947679 27948222 -138702074 + RMER1C Other Other 378 726 -616 4 798 245 428 12 29 chrX 27948694 27949038 -138701258 + RMER1C Other Other 509 846 -496 4 798 300 405 26 19 chrX 27949154 27949418 -138700878 + RMER1C Other Other 464 729 -613 4 798 369 423 12 0 chrX 27949694 27949942 -138700354 + RMER1C Other Other 421 671 -671 4 798 290 393 25 31 chrX 27950050 27950554 -138699742 + RMER1C Other Other 374 865 -477 4 798 23877 44 0 0 chrX 27950658 27953773 -138696523 - L1_Mm LINE L1 -1059 4824 1710 4 798 9872 182 30 14 chrX 27953773 27956627 -138693669 - Lx4A LINE L1 -427 6631 3725 4 798 3611 180 50 5 chrX 27956639 27957671 -138692625 + Lx3C LINE L1 5353 6423 -553 4 798 931 135 0 0 chrX 27957664 27957820 -138692476 + L1_Mm LINE L1 4206 4361 -1522 4 798 1615 63 13 5 chrX 27957832 27958056 -138692240 - MT2_Mm LTR ERVL 0 493 268 4 798 24383 130 18 47 chrX 27958056 27958549 -138691747 - L1Md_F LINE L1 -145 5738 5245 4 798 594 0 0 0 chrX 27958549 27958615 -138691681 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 798 24383 132 19 47 chrX 27958615 27962953 -138687343 - L1Md_F LINE L1 -639 5244 1074 4 798 2075 204 11 0 chrX 27962956 27963426 -138686870 - L1Md_F LINE L1 -5415 1201 727 4 798 424 254 16 8 chrX 27963437 27963564 -138686732 - L1Md_F LINE L1 -5814 802 675 4 798 488 294 25 109 chrX 27963595 27964073 -138686223 - L1VL1 LINE L1 -5941 477 1 4 798 876 156 62 19 chrX 27964119 27964328 -138685968 - L1_Mm LINE L1 -432 5451 5234 4 798 1077 267 82 0 chrX 27964493 27964785 -138685511 + MER2 DNA MER2_type 6 321 -24 4 798 857 278 10 0 chrX 27965205 27965410 -138684886 + B3 SINE B2 1 207 -9 4 798 294 50 0 0 chrX 27965495 27965535 -138684761 + (TTCC)n Simple_repeat Simple_repeat 2 41 0 4 798 602 271 29 68 chrX 27965603 27965809 -138684487 - B3A SINE B2 0 198 1 4 798 602 270 51 29 chrX 27966111 27966386 -138683910 + Lx7 LINE L1 5857 6137 -1559 4 798 1790 261 47 21 chrX 27966421 27966997 -138683299 + Lx7 LINE L1 6064 6654 -1042 4 798 462 148 0 0 chrX 27967261 27967349 -138682947 + RMER3D-int LTR ERVK 489 564 -2278 4 798 597 212 25 40 chrX 27967364 27967565 -138682731 + RMER3D-int LTR ERVK 652 849 -1993 4 798 469 232 65 34 chrX 27967631 27967987 -138682309 + RMER3D-int LTR ERVK 354 804 -2038 4 798 547 139 71 24 chrX 27968022 27968192 -138682104 + GA-rich Low_complexity Low_complexity 3 180 0 4 798 1523 183 165 29 chrX 27968237 27968559 -138681737 + RMER3D-int LTR ERVK 1014 1383 -1459 4 798 3231 51 2 0 chrX 27968559 27968954 -138681342 - MTA_Mm LTR MaLR 0 396 1 4 798 1523 193 13 36 chrX 27968954 27969111 -138681185 + RMER3D-int LTR ERVK 1384 1533 -1309 4 798 529 221 40 33 chrX 27969139 27969289 -138681007 + RMER3D-int LTR ERVK 1528 1678 -1164 4 798 2646 215 43 52 chrX 27969311 27970234 -138680062 + RMER3D-int LTR ERVK 1927 2841 -1 4 798 2860 96 7 2 chrX 27970235 27970654 -138679642 + BGLII LTR ERVK 1 421 0 4 798 1294 219 64 38 chrX 27970893 27971327 -138678969 - RLTR21 LTR ERVK -150 1254 706 4 798 11507 82 5 2 chrX 27971334 27973667 -138676629 - L1Md_F2 LINE L1 -19 6563 4225 4 798 12660 113 5 35 chrX 27973650 27976472 -138673824 - L1Md_F2 LINE L1 -2718 3165 217 4 798 850 154 11 51 chrX 27976475 27976653 -138673643 - RLTR21 LTR ERVK -855 717 547 4 798 255 31 0 0 chrX 27976660 27976692 -138673604 + (A)n Simple_repeat Simple_repeat 1 32 0 4 798 1436 220 22 40 chrX 27976709 27977031 -138673265 - RLTR21 LTR ERVK -1248 324 9 4 798 1591 257 21 28 chrX 27977537 27977771 -138672525 - Lx6 LINE L1 -1326 6134 5904 4 798 1993 196 32 10 chrX 27977771 27978183 -138672113 - MTC LTR MaLR 0 421 1 4 798 1591 257 21 28 chrX 27978183 27978480 -138671816 - Lx6 LINE L1 -1557 5903 5607 4 798 1006 206 25 3 chrX 27978487 27978770 -138671526 - L1_Mur3 LINE L1 -2593 3287 2999 4 798 3691 144 21 24 chrX 27978771 27979301 -138670995 - L1_Mus3 LINE L1 -8 6630 6101 4 798 2724 70 0 0 chrX 27979301 27979643 -138670653 - ORR1A1 LTR MaLR -4 342 1 4 798 3691 144 21 24 chrX 27979643 27979767 -138670529 - L1_Mus3 LINE L1 -538 6100 5978 4 798 4260 63 44 4 chrX 27979767 27980539 -138669757 + L1Md_F2 LINE L1 5273 6062 -520 4 798 324 78 15 15 chrX 27980539 27980604 -138669692 + L1Md_F2 LINE L1 6515 6579 -3 4 798 1094 318 7 31 chrX 27980604 27981026 -138669270 - RodERV21-int LTR ERV1 -3327 1664 1253 4 798 8000 13 0 0 chrX 27982202 27983156 -138667140 + L1Md_A LINE L1 4633 5586 -297 4 798 8736 17 0 0 chrX 27983156 27984147 -138666149 + L1Md_A LINE L1 5587 6577 -5 4 798 729 61 0 115 chrX 27984172 27984302 -138665994 - RLTRETN_Mm LTR ERVK -207 115 1 4 798 6535 198 43 29 chrX 27984302 27985808 -138664488 - RLTR14-int LTR ERV1 -596 4721 3195 4 798 1146 175 187 45 chrX 27985808 27986166 -138664130 + RLTR9E LTR ERVK 1 409 0 4 798 671 230 17 69 chrX 27986168 27986491 -138663805 + MMETn-int LTR ERVK 2 372 -2942 4 798 256 182 0 18 chrX 27986486 27986542 -138663754 + RLTR45-int LTR ERVK 2091 2145 -5099 4 798 1830 161 65 14 chrX 27987061 27987478 -138662818 + ETnERV2-int LTR ERVK 1648 2085 -5321 4 798 2536 182 34 30 chrX 27987502 27988156 -138662140 + ETnERV2-int LTR ERVK 1934 3123 -4283 4 798 31454 86 2 2 chrX 27988157 27993636 -138656660 - L1Md_F2 LINE L1 -14 6568 1105 4 798 33021 80 2 13 chrX 27993627 27999766 -138650530 - L1Md_F2 LINE L1 0 6582 519 4 798 1745 43 4 0 chrX 27999767 28000000 -138650296 - L1Md_F LINE L1 -5494 1025 792 4 798 4610 109 4 9 chrX 28000000 28000700 -138649596 - L1Md_F LINE L1 -5728 791 95 1 798 648 258 35 142 chrX 28000764 28000857 -138649439 + MMETn-int LTR ERVK 5040 5120 -2124 2 798 4789 64 0 7 chrX 28000857 28001466 -138648830 + L1Md_F2 LINE L1 5966 6570 -12 3 798 2873 182 15 42 chrX 28001466 28002407 -138647889 + MMETn-int LTR ERVK 2541 3719 -1125 2 798 726 195 0 0 chrX 28002402 28002525 -138647771 + MMETn-int LTR ERVK 6539 6661 -745 2 798 3094 205 51 16 chrX 28002555 28003294 -138647002 - RLTR14-int LTR ERV1 -2117 3200 2436 4 798 1874 229 56 31 chrX 28004749 28005271 -138645025 + RLTR40 LTR ERVK 22 556 -261 5 798 425 168 9 0 chrX 28005273 28005380 -138644916 + GA-rich Low_complexity Low_complexity 2 109 0 6 798 636 280 52 44 chrX 28005380 28005567 -138644729 + RLTR40 LTR ERVK 566 752 -65 5 798 6177 91 34 2 chrX 28005567 28005981 -138644315 - RLTR13B1 LTR ERVK 0 893 476 7 798 396 0 0 0 chrX 28005981 28006025 -138644271 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 798 6177 91 34 2 chrX 28006025 28006476 -138643820 - RLTR13B1 LTR ERVK -418 475 3 7 798 636 280 52 44 chrX 28006476 28006538 -138643758 + RLTR40 LTR ERVK 753 817 0 5 798 275 0 0 28 chrX 28006729 28006765 -138643531 + (TAA)n Simple_repeat Simple_repeat 2 36 0 9 798 681 232 57 10 chrX 28008296 28008488 -138641808 - Lx9 LINE L1 -243 7401 7201 1 798 398 191 0 0 chrX 28008488 28008572 -138641724 + Lx9 LINE L1 7554 7637 -7 1 798 473 287 13 0 chrX 28008581 28008731 -138641565 + Lx5 LINE L1 6825 6976 -74 1 798 321 26 0 0 chrX 28008739 28008777 -138641519 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 1 798 594 230 35 14 chrX 28008789 28008930 -138641366 + B1_Mur2 SINE Alu 1 144 -5 1 798 1977 148 27 0 chrX 28008961 28009299 -138640997 + L1_Mus3 LINE L1 6284 6630 -8 1 798 28 48 0 0 chrX 28009312 28009354 -138640942 + AT_rich Low_complexity Low_complexity 1 42 0 1 798 691 238 7 12 chrX 28009481 28009666 -138640630 + Lx4B LINE L1 6809 6994 -64 1 798 2712 178 32 2 chrX 28009728 28010320 -138639976 - L1_Mur2 LINE L1 -1176 4701 4092 1 798 10099 146 30 24 chrX 28010320 28011690 -138638606 - RLTR22_Mur LTR ERVK 0 1848 461 1 798 376 62 0 30 chrX 28011690 28011756 -138638540 + (TAG)n Simple_repeat Simple_repeat 3 66 0 2 798 10099 146 30 24 chrX 28011756 28012221 -138638075 - RLTR22_Mur LTR ERVK -1388 460 1 1 798 805 153 199 0 chrX 28012221 28012462 -138637834 - L1_Mur2 LINE L1 -1782 4095 3807 1 798 1387 133 25 4 chrX 28012506 28012747 -138637549 + L1_Mus4 LINE L1 6391 6636 0 2 798 180 0 0 0 chrX 28013236 28013256 -138637040 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 2 798 24 0 0 0 chrX 28014649 28014673 -138635623 + AT_rich Low_complexity Low_complexity 1 24 0 2 798 367 261 22 7 chrX 28014958 28015093 -138635203 + L1_Mur2 LINE L1 4334 4470 -1407 2 798 747 331 42 19 chrX 28015098 28015533 -138634763 + Lx6 LINE L1 6506 7296 -164 2 798 1303 204 20 92 chrX 28015516 28015964 -138634332 - L1_Mur2 LINE L1 -2142 3735 3320 2 798 1156 76 0 0 chrX 28015966 28016124 -138634172 - L1_Mus1 LINE L1 0 6567 6410 2 798 20383 130 6 6 chrX 28016127 28019970 -138630326 - L1_Mus1 LINE L1 -434 6133 2294 2 798 459 207 11 0 chrX 28019971 28020058 -138630238 + L1VL1 LINE L1 195 282 -6140 2 798 29876 54 1 3 chrX 28020053 28024081 -138626215 + L1Md_F2 LINE L1 1568 5585 -298 2 798 7663 63 9 0 chrX 28024082 28025057 -138625239 + L1Md_F2 LINE L1 5587 6570 -12 2 798 1285 208 75 44 chrX 28025057 28025486 -138624810 + RLTR21 LTR ERVK 706 1251 -153 3 798 2700 102 19 2 chrX 28025727 28026141 -138624155 - BGLII LTR ERVK 0 421 1 3 798 2620 202 117 14 chrX 28026141 28027065 -138623231 - MYSERV16_I-int LTR ERVK 0 2326 1308 3 798 529 221 40 33 chrX 28027087 28027237 -138623059 - RMER3D-int LTR ERVK -1164 1678 1528 3 798 816 154 0 20 chrX 28027265 28027417 -138622879 - RMER3D-int LTR ERVK -1309 1533 1385 3 798 3909 5 0 7 chrX 28027458 28027897 -138622399 + L1Md_T LINE L1 6146 6581 -1 3 798 22398 133 17 73 chrX 28028045 28032140 -138618156 + L1_Mm LINE L1 1408 5234 -649 3 798 198 0 0 0 chrX 28032140 28032162 -138618134 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 798 22398 133 17 73 chrX 28032162 28032654 -138617642 + L1_Mm LINE L1 5235 5737 -146 3 798 1615 63 13 5 chrX 28032654 28032878 -138617418 + MT2_Mm LTR ERVL 268 493 0 3 798 969 122 0 0 chrX 28032890 28033046 -138617250 - L1_Mm LINE L1 -1522 4361 4206 3 798 932 171 123 9 chrX 28033039 28033258 -138617038 - Lx3C LINE L1 -553 6423 6180 3 798 2769 39 6 173 chrX 28033276 28033744 -138616552 - RLTR10 LTR ERVK 0 390 1 3 798 8295 16 6 1 chrX 28033746 28034734 -138615562 - RLTR10-int LTR ERVK -3 1984 992 3 798 7761 38 1 10 chrX 28034812 28035794 -138614502 - RLTR10-int LTR ERVK -999 988 16 3 798 2760 39 6 177 chrX 28035829 28036299 -138613997 - RLTR10 LTR ERVK 0 390 1 3 798 2799 170 33 1 chrX 28036303 28037099 -138613197 - Lx3C LINE L1 -809 6167 5353 3 798 7504 214 52 9 chrX 28037111 28040024 -138610272 + Lx4B LINE L1 3734 6782 -276 4 798 319 367 71 12 chrX 28040285 28040525 -138609771 - RMER1C Other Other -494 848 595 4 798 226 184 0 58 chrX 28040730 28040782 -138609514 - RMER2 LTR ERV1 -234 333 285 4 798 390 419 12 0 chrX 28040999 28041247 -138609049 - RMER1C Other Other -671 671 421 4 798 284 409 26 19 chrX 28041526 28041790 -138608506 - RMER1C Other Other -613 729 464 4 798 273 425 12 32 chrX 28041906 28042251 -138608045 - RMER1C Other Other -496 846 509 4 798 288 390 17 50 chrX 28042887 28043068 -138607228 - RMER1C Other Other -691 651 383 4 798 267 433 24 14 chrX 28044209 28044720 -138605576 - RMER1C Other Other -478 864 378 4 798 423 0 0 0 chrX 28045108 28045155 -138605141 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 798 254 328 36 29 chrX 28045271 28045409 -138604887 - RMER1C Other Other -753 589 451 4 798 412 403 41 19 chrX 28045626 28046076 -138604220 - RMER1C Other Other -468 874 412 4 798 293 418 24 18 chrX 28046590 28046926 -138603370 - RMER1C Other Other -518 824 487 5 798 294 29 0 0 chrX 28047514 28047549 -138602747 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 5 99 30946 125 9 25 chrX 28048756 28050533 -138599763 + L1Md_F3 LINE L1 233 1973 -3910 5 799 180 0 0 0 chrX 28050533 28050553 -138599743 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 799 30946 69 2 7 chrX 28050553 28054180 -138596116 + L1Md_F3 LINE L1 1974 5586 -297 5 799 7650 71 6 0 chrX 28054180 28055172 -138595124 + L1Md_F3 LINE L1 5587 6584 0 5 799 392 65 25 25 chrX 28057015 28057094 -138593202 + (TTTTG)n Simple_repeat Simple_repeat 3 81 0 5 799 266 380 0 0 chrX 28057853 28057974 -138592322 - RMER1C Other Other -685 657 537 5 799 458 256 8 23 chrX 28058824 28058956 -138591340 - Lx8 LINE L1 -704 6769 6640 5 799 887 287 35 35 chrX 28059111 28059479 -138590817 - ORR1D2 LTR MaLR -2 368 1 5 799 422 389 4 0 chrX 28059584 28059818 -138590478 - Lx8 LINE L1 -283 7190 6956 5 799 616 332 47 14 chrX 28059820 28060031 -138590265 + ORR1D2 LTR MaLR 1 218 -152 5 799 593 267 47 24 chrX 28060044 28060092 -138590204 + Lx6 LINE L1 2265 2322 -3555 6 799 495 0 0 0 chrX 28060092 28060147 -138590149 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 799 593 267 47 24 chrX 28060147 28060309 -138589987 + Lx6 LINE L1 2323 2479 -3398 6 799 1091 221 40 12 chrX 28060309 28060635 -138589661 + Lx6 LINE L1 3510 3844 -2033 6 799 2815 244 21 10 chrX 28060640 28061630 -138588666 + Lx6 LINE L1 5105 6108 -1352 6 799 347 284 71 47 chrX 28061939 28062109 -138588187 - RLTR1B LTR ERV1 -173 339 166 6 799 433 148 78 19 chrX 28062442 28062470 -138587826 + URR1B DNA MER1_type 117 144 -81 6 799 522 0 0 0 chrX 28062470 28062528 -138587768 + (TA)n Simple_repeat Simple_repeat 2 59 0 6 799 433 148 78 19 chrX 28062528 28062602 -138587694 + URR1B DNA MER1_type 145 224 -1 6 799 2930 156 66 13 chrX 28062775 28063224 -138587072 - L1_Mur2 LINE L1 -699 5178 4731 6 799 216 0 0 0 chrX 28063224 28063248 -138587048 + (TTA)n Simple_repeat Simple_repeat 1 24 0 6 799 2930 156 66 13 chrX 28063248 28063408 -138586888 - L1_Mur2 LINE L1 -1147 4730 4537 6 799 2046 257 68 3 chrX 28063405 28064011 -138586285 + Lx2B LINE L1 6342 6986 -14 6 799 589 189 9 0 chrX 28064864 28064975 -138585321 + Lx4A LINE L1 6719 6830 -228 6 799 6397 158 27 10 chrX 28064974 28066303 -138583993 + L1_Mus3 LINE L1 4601 5948 -690 6 799 22401 146 14 53 chrX 28066301 28069805 -138580491 + L1_Mus1 LINE L1 1492 4795 -1088 7 799 7257 80 4 14 chrX 28069805 28070810 -138579486 + L1Md_F2 LINE L1 5588 6582 0 7 799 22401 118 20 32 chrX 28070810 28072568 -138577728 + L1_Mus1 LINE L1 4796 6567 0 7 799 261 0 0 0 chrX 28072688 28072717 -138577579 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 799 1797 141 254 31 chrX 28072806 28073254 -138577042 - RLTR6_Mm LTR ERV1 -70 584 37 7 799 60209 36 23 1 chrX 28073367 28080980 -138569316 - RLTR6-int LTR ERV1 0 7778 2 7 799 1853 146 244 30 chrX 28080982 28081449 -138568847 - RLTR6_Mm LTR ERV1 -51 603 37 7 799 481 293 66 13 chrX 28081563 28081715 -138568581 + B3 SINE B2 4 163 -53 7 799 233 278 0 65 chrX 28081719 28081796 -138568500 + B4A SINE B4 82 153 -139 7 799 246 352 22 11 chrX 28081800 28081889 -138568407 + B3 SINE B2 113 202 -14 7 799 247 357 20 10 chrX 28082793 28082892 -138567404 - PB1D10 SINE Alu -15 102 3 7 799 266 294 15 0 chrX 28082830 28082898 -138567398 - B4A SINE B4 -142 150 82 7 799 432 143 0 0 chrX 28083469 28083480 -138566816 + (CATATA)n Simple_repeat Simple_repeat 4 14 0 8 799 186 43 0 0 chrX 28083480 28083503 -138566793 + (TG)n Simple_repeat Simple_repeat 2 24 0 8 799 432 143 0 0 chrX 28083503 28083568 -138566728 + (CATATA)n Simple_repeat Simple_repeat 3 67 0 8 799 201 162 0 0 chrX 28083732 28083769 -138566527 + T-rich Low_complexity Low_complexity 2 38 0 8 799 23999 145 5 1 chrX 28084201 28089372 -138560924 - L1_Mus3 LINE L1 -4 6634 1445 8 799 267 355 49 8 chrX 28089623 28089745 -138560551 + B1F SINE Alu 20 146 -3 8 799 213 296 0 0 chrX 28090049 28090093 -138560203 - ID4 SINE ID -36 47 4 8 799 230 310 127 0 chrX 28090326 28090397 -138559899 + ID4 SINE ID 4 83 0 8 799 371 251 160 10 chrX 28090662 28090862 -138559434 + B4 SINE B4 1 230 -62 8 799 1052 91 7 0 chrX 28090863 28091006 -138559290 + B1_Mus1 SINE Alu 4 147 -1 8 799 864 291 14 24 chrX 28091265 28091476 -138558820 + B3 SINE B2 2 210 -6 9 799 256 292 101 28 chrX 28092259 28092368 -138557928 - B1F SINE Alu -32 117 1 9 799 235 333 47 70 chrX 28092368 28092388 -138557908 - ID_B1 SINE B4 -29 195 70 9 799 260 278 134 60 chrX 28092383 28092517 -138557779 - B1F SINE Alu -2 147 4 9 799 24 0 0 0 chrX 28092517 28092541 -138557755 + AT_rich Low_complexity Low_complexity 1 24 0 9 799 411 21 0 0 chrX 28092819 28092867 -138557429 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 799 447 19 0 0 chrX 28092868 28092920 -138557376 + (GA)n Simple_repeat Simple_repeat 2 53 0 9 799 5274 140 19 1 chrX 28094216 28095067 -138555229 - Lx LINE L1 -2 6652 5787 9 799 15901 159 19 55 chrX 28095068 28097006 -138553290 - L1VL2 LINE L1 -1127 4756 2824 9 799 243 0 0 0 chrX 28097006 28097033 -138553263 + (TA)n Simple_repeat Simple_repeat 2 28 0 9 799 15901 159 19 55 chrX 28097033 28097115 -138553181 - L1VL2 LINE L1 -3060 2823 2808 9 799 955 119 0 0 chrX 28097115 28097249 -138553047 - B1_Mus2 SINE Alu -13 134 1 1 799 15901 176 33 60 chrX 28097249 28099947 -138550349 - L1VL2 LINE L1 -3076 2807 300 9 799 22 56 0 0 chrX 28100040 28100076 -138550220 + AT_rich Low_complexity Low_complexity 1 36 0 1 799 648 323 97 34 chrX 28100085 28100354 -138549942 - B4A SINE B4 -3 289 4 1 799 966 227 19 0 chrX 28100587 28100794 -138549502 - B3 SINE B2 -5 211 1 1 799 365 261 75 8 chrX 28100940 28101060 -138549236 - B1F SINE Alu -1 148 21 1 799 456 289 0 0 chrX 28101120 28101224 -138549072 - B3 SINE B2 -15 201 98 1 799 4613 131 15 18 chrX 28102065 28102859 -138547437 - YREP_Mm Unknown Unknown -35 1777 986 1 799 331 341 111 34 chrX 28102864 28103098 -138547198 - L2 LINE L2 -1119 2300 2049 1 799 207 114 0 0 chrX 28103194 28103229 -138547067 + (CCA)n Simple_repeat Simple_repeat 1 35 0 1 799 549 338 39 7 chrX 28103327 28103482 -138546814 + B4A SINE B4 131 290 -2 1 799 205 364 30 23 chrX 28103753 28103885 -138546411 - L2 LINE L2 -1769 1650 1518 1 799 5142 125 78 32 chrX 28105223 28106150 -138544146 - Lx3A LINE L1 -7 6974 6006 1 799 305 307 56 70 chrX 28106591 28106875 -138543421 + RMER17C LTR ERVK 83 362 -48 1 799 9394 11 1 0 chrX 28107029 28108159 -138542137 + L1Md_A LINE L1 214 1344 -5380 1 799 14710 6 0 0 chrX 28110666 28112401 -138537895 + L1Md_A LINE L1 3852 5586 -297 1 799 9014 3 1 0 chrX 28112401 28113396 -138536900 + L1Md_A LINE L1 5587 6582 0 1 799 812 120 35 21 chrX 28113563 28113708 -138536588 + L1_Mus1 LINE L1 6421 6567 0 1 799 3583 78 8 30 chrX 28113712 28114539 -138535757 - L1Md_A LINE L1 -4124 1759 964 1 799 29440 82 5 42 chrX 28114540 28117645 -138532651 - L1Md_F2 LINE L1 -12 6570 3464 1 799 1136 90 73 0 chrX 28117645 28117823 -138532473 - B2_Mm2 SINE B2 0 195 5 1 799 29440 108 16 49 chrX 28117823 28121256 -138529040 - L1Md_F2 LINE L1 -2420 3463 273 1 799 1280 183 52 0 chrX 28121254 28121505 -138528791 - L1VL1 LINE L1 -6156 266 3 1 799 12748 139 7 0 chrX 28121506 28122344 -138527952 + L1_Mus1 LINE L1 2294 3132 -2751 1 799 210 37 0 0 chrX 28122344 28122371 -138527925 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 799 12748 139 7 0 chrX 28122371 28123778 -138526518 + L1_Mus1 LINE L1 3133 4553 -1330 1 799 2270 18 7 337 chrX 28123778 28124360 -138525936 + RLTR10 LTR ERVK 1 390 0 1 799 294 161 0 0 chrX 28124360 28124416 -138525880 + RLTR10-int LTR ERVK 1 56 -1931 1 799 16112 22 16 0 chrX 28124447 28126388 -138523908 + RLTR10-int LTR ERVK 13 1984 -3 1 799 2546 31 2 274 chrX 28126390 28126926 -138523370 + RLTR10 LTR ERVK 1 390 0 1 799 7986 110 6 6 chrX 28126926 28128495 -138521801 + L1_Mus1 LINE L1 4549 6118 -449 1 799 1160 109 17 0 chrX 28128496 28128671 -138521625 + L1_Mus1 LINE L1 6390 6567 0 1 799 1449 192 20 83 chrX 28128673 28129117 -138521179 + L1_Mur2 LINE L1 3320 3735 -2142 1 799 733 324 44 26 chrX 28129106 28129534 -138520762 - Lx6 LINE L1 -180 7280 6506 1 799 287 276 22 7 chrX 28129539 28129674 -138520622 - L1_Mur2 LINE L1 -1407 4470 4334 1 799 24 0 0 0 chrX 28129958 28129982 -138520314 + AT_rich Low_complexity Low_complexity 1 24 0 1 799 180 0 0 0 chrX 28131373 28131393 -138518903 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 1 799 11175 34 0 0 chrX 28131762 28133816 -138516480 - L1Md_T LINE L1 0 6582 4529 1 799 1309 143 30 0 chrX 28133848 28134079 -138516217 - L1_Mus4 LINE L1 0 6636 6399 1 799 1148 197 17 14 chrX 28134132 28134420 -138515876 + L1_Mur2 LINE L1 3807 4095 -1782 1 799 10063 142 39 25 chrX 28134420 28134867 -138515429 + RLTR22_Mur LTR ERVK 1 444 -1404 1 799 805 66 0 16 chrX 28134867 28134990 -138515306 + (CTA)n Simple_repeat Simple_repeat 3 123 0 1 799 10063 142 39 25 chrX 28134990 28136365 -138513931 + RLTR22_Mur LTR ERVK 445 1847 -1 1 799 2711 175 37 2 chrX 28136365 28136954 -138513342 + L1_Mur2 LINE L1 4092 4701 -1176 1 799 717 256 19 14 chrX 28136990 28137204 -138513092 - Lx4B LINE L1 -35 7023 6809 1 799 231 271 0 0 chrX 28137212 28137271 -138513025 + T-rich Low_complexity Low_complexity 4 62 0 1 799 26 50 0 0 chrX 28137337 28137377 -138512919 + AT_rich Low_complexity Low_complexity 1 40 0 1 799 1914 159 45 0 chrX 28137389 28137742 -138512554 - L1_Mus3 LINE L1 -8 6630 6262 1 799 660 208 34 14 chrX 28137768 28137914 -138512382 - B1_Mur3 SINE Alu 0 149 1 1 799 351 0 0 0 chrX 28137929 28137968 -138512328 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1 799 488 287 13 0 chrX 28137976 28138126 -138512170 - Lx5 LINE L1 -74 6976 6825 1 799 380 202 0 0 chrX 28138135 28138219 -138512077 - Lx9 LINE L1 -7 7637 7554 1 799 648 237 57 10 chrX 28138219 28138411 -138511885 + Lx9 LINE L1 7201 7401 -243 1 799 180 0 0 0 chrX 28139598 28139618 -138510678 + (T)n Simple_repeat Simple_repeat 1 20 0 1 799 1276 27 0 0 chrX 28139618 28139765 -138510531 - B1_Mus2 SINE Alu 0 147 1 1 799 225 0 0 0 chrX 28140138 28140163 -138510133 + (TTC)n Simple_repeat Simple_repeat 2 26 0 1 799 189 0 0 0 chrX 28140163 28140184 -138510112 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1 799 501 286 71 54 chrX 28140382 28140437 -138509859 - RLTR40 LTR ERVK -8 809 753 1 799 6252 94 24 5 chrX 28140437 28141313 -138508983 + RLTR13B1 LTR ERVK 1 893 0 1 799 501 286 71 54 chrX 28141313 28141497 -138508799 - RLTR40 LTR ERVK -65 752 566 1 799 377 161 11 0 chrX 28141497 28141584 -138508712 + CT-rich Low_complexity Low_complexity 2 89 0 1 799 1856 217 63 44 chrX 28141584 28142109 -138508187 - RLTR40 LTR ERVK -261 556 22 1 799 3175 206 44 17 chrX 28143550 28144297 -138505999 + RLTR14-int LTR ERV1 2434 3200 -2117 1 799 692 211 0 0 chrX 28144328 28144451 -138505845 - MMETn-int LTR ERVK -745 6661 6539 1 799 2898 170 13 41 chrX 28144446 28145365 -138504931 - MMETn-int LTR ERVK -1703 3141 2541 1 799 257 51 85 0 chrX 28145365 28145424 -138504872 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 1 799 4845 56 0 7 chrX 28145436 28146045 -138504251 - L1Md_F2 LINE L1 -12 6570 5966 1 799 379 152 0 6 chrX 28146046 28146138 -138504158 - MMETn-int LTR ERVK -2291 2553 2473 1 799 2041 89 28 16 chrX 28146214 28146532 -138503764 - RLTRETN_Mm LTR ERVK 0 322 1 1 799 24094 31 15 10 chrX 28146532 28151092 -138499204 - MMETn-int LTR ERVK 0 4844 180 1 799 2856 34 0 0 chrX 28151063 28151417 -138498879 - ETnERV-int LTR ERVK -2960 354 1 1 799 2041 89 28 16 chrX 28151417 28151735 -138498561 - RLTRETN_Mm LTR ERVK 0 322 1 1 799 6570 88 1 6 chrX 28151735 28152669 -138497627 + L1Md_F LINE L1 97 1025 -5494 1 799 29527 98 5 21 chrX 28152670 28158033 -138492263 + L1Md_F2 LINE L1 315 5587 -296 1 799 7880 49 2 4 chrX 28158034 28159018 -138491278 + L1Md_F2 LINE L1 5589 6570 -12 1 799 905 210 155 16 chrX 28159044 28159354 -138490942 - ETnERV2-int LTR ERVK -2295 4949 4597 1 799 3552 130 47 3 chrX 28159343 28159961 -138490335 - ETnERV2-int LTR ERVK -3321 4085 3441 1 799 758 149 39 55 chrX 28160186 28160367 -138489929 - ETnERV2-int LTR ERVK -2654 2190 2040 1 799 521 110 0 0 chrX 28160367 28160440 -138489856 + L1Md_F2 LINE L1 5513 5585 -298 1 799 7546 70 1 10 chrX 28160441 28161432 -138488864 + L1Md_F2 LINE L1 5587 6568 -14 1 799 2597 175 38 30 chrX 28161433 28162087 -138488209 - ETnERV2-int LTR ERVK -4271 3135 1934 1 799 1754 173 65 12 chrX 28162111 28162527 -138487769 - ETnERV2-int LTR ERVK -5321 2085 1648 1 799 681 13 0 0 chrX 28162534 28162612 -138487684 + (GAA)n Simple_repeat Simple_repeat 2 79 0 1 799 268 167 0 0 chrX 28162615 28162669 -138487627 - RMER16-int LTR ERVK -5212 194 141 1 799 320 146 0 18 chrX 28163104 28163160 -138487136 - ETnERV2-int LTR ERVK -6278 1128 1074 1 799 652 255 12 104 chrX 28163150 28163478 -138486818 - ETnERV2-int LTR ERVK -4545 299 2 1 799 1099 175 187 45 chrX 28163480 28163838 -138486458 - RLTR9E LTR ERVK 0 409 1 1 799 8009 191 105 28 chrX 28163838 28165805 -138484491 + RLTR14-int LTR ERV1 3195 5312 -5 1 799 1637 196 12 21 chrX 28165830 28166158 -138484138 + RLTR14 LTR ERV1 7 331 -51 1 799 1432 137 0 0 chrX 28166158 28166384 -138483912 - L1_Mus3 LINE L1 -185 5698 5473 1 799 4574 105 24 0 chrX 28166386 28167050 -138483246 + L1_Mus3 LINE L1 5712 6391 -247 1 799 1348 284 14 49 chrX 28167055 28167485 -138482811 + RodERV21-int LTR ERV1 2304 2718 -2273 1 799 498 347 27 42 chrX 28167610 28168088 -138482208 + RodERV21-int LTR ERV1 3586 4056 -3035 1 799 341 22 22 0 chrX 28168248 28168294 -138482002 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1 799 675 227 96 29 chrX 28168959 28169168 -138481128 + LTRIS4 LTR ERV1 285 507 0 1 799 676 242 51 79 chrX 28169170 28169721 -138480575 + MuRRS4-int LTR ERV1 5 498 -4565 1 799 1223 236 66 22 chrX 28170056 28170376 -138479920 + MuRRS4-int LTR ERV1 342 675 -4388 1 799 4338 130 25 9 chrX 28170405 28171090 -138479206 + RMER16-int LTR ERVK 666 1361 -4045 1 799 337 172 80 34 chrX 28171177 28171295 -138479001 + RMER16-int LTR ERVK 1386 1448 -3958 1 799 622 145 92 17 chrX 28171279 28171398 -138478898 + MuRRS4-int LTR ERV1 750 877 -4186 1 799 687 274 16 78 chrX 28171398 28171655 -138478641 - LSU-rRNA_Hsa rRNA rRNA -1371 3664 3424 1 799 1471 272 33 7 chrX 28171804 28172226 -138478070 + MuRRS4-int LTR ERV1 1012 1444 -3619 1 799 5254 156 63 24 chrX 28172248 28174555 -138475741 + MuRRS4-int LTR ERV1 1104 4271 -792 1 799 755 196 0 7 chrX 28174546 28174695 -138475601 + MuRRS4-int LTR ERV1 4788 4935 -128 1 799 1179 273 3 7 chrX 28174695 28175005 -138475291 + MuRRS4-int LTR ERV1 4637 4945 -118 1 799 3700 60 20 12 chrX 28175479 28175971 -138474325 - LTRIS2 LTR ERV1 0 564 69 1 799 1099 167 54 25 chrX 28175971 28176211 -138474085 - RLTR1B-int LTR ERV1 -26 5037 4791 1 799 1126 150 58 5 chrX 28176437 28176698 -138473598 - RLTR1B-int LTR ERV1 -486 2813 2669 1 799 5255 83 156 91 chrX 28176685 28177927 -138472369 - RLTR1B-int LTR ERV1 -744 2555 1256 1 799 183 42 0 0 chrX 28177927 28177951 -138472345 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 799 2641 198 119 42 chrX 28177951 28178843 -138471453 - RLTR1B-int LTR ERV1 -3270 1793 835 1 799 4153 152 52 18 chrX 28178847 28179552 -138470744 - RMER16-int LTR ERVK -3988 1418 690 1 799 946 131 90 17 chrX 28179538 28179716 -138470580 - RMER16-int LTR ERVK -5075 331 141 1 799 724 75 0 0 chrX 28180060 28180153 -138470143 - RLTR1B-int LTR ERV1 -3006 293 201 1 99 3571 74 20 16 chrX 28180380 28180874 -138469422 - LTRIS2 LTR ERV1 0 564 69 1 800 3635 318 40 47 chrX 28180989 28182598 -138467698 + RodERV21-int LTR ERV1 2905 4500 -491 1 800 2632 123 35 54 chrX 28182598 28183026 -138467270 + RLTR9B2 LTR ERVK 1 420 0 1 800 3635 318 40 47 chrX 28183026 28183317 -138466979 + RodERV21-int LTR ERV1 4501 4793 -198 1 800 310 250 30 30 chrX 28183385 28183484 -138466812 + RMER17C-int LTR ERVK 3138 3236 -2 1 800 853 145 13 46 chrX 28183728 28183880 -138466416 + B1_Mus1 SINE Alu 2 148 0 1 800 268 196 107 10 chrX 28184023 28184126 -138466170 + L1_Rod LINE L1 5260 5372 -475 1 800 2224 207 69 32 chrX 28184126 28184680 -138465616 - RLTR31A_Mm LTR ERVK 0 584 11 1 800 466 227 25 62 chrX 28184680 28184840 -138465456 + L1_Rod LINE L1 5381 5534 -313 1 800 209 169 49 33 chrX 28185005 28185066 -138465230 + CT-rich Low_complexity Low_complexity 2 63 0 1 800 335 268 59 66 chrX 28186105 28186241 -138464055 + RodERV21-int LTR ERV1 893 1027 -3964 1 800 1386 309 37 43 chrX 28186385 28186925 -138463371 + RodERV21-int LTR ERV1 1116 1652 -3339 1 800 7335 73 6 8 chrX 28186937 28188252 -138462044 - L1Md_F2 LINE L1 -2 6580 5274 1 800 3838 154 18 23 chrX 28188253 28188377 -138461919 + L1_Mus3 LINE L1 5978 6100 -538 1 800 2888 67 0 3 chrX 28188377 28188720 -138461576 + ORR1A1 LTR MaLR 1 342 -4 1 800 3838 154 18 23 chrX 28188720 28189251 -138461045 + L1_Mus3 LINE L1 6101 6630 -8 1 800 1125 206 28 3 chrX 28189252 28189534 -138460762 + L1_Mur3 LINE L1 2999 3287 -2593 1 800 1291 222 14 21 chrX 28189549 28189839 -138460457 + Lx7 LINE L1 5617 5904 -1792 1 800 2061 204 17 15 chrX 28189849 28190258 -138460038 + MTC LTR MaLR 12 421 0 1 800 462 317 26 18 chrX 28190264 28190492 -138459804 + Lx6 LINE L1 5905 6134 -1326 1 800 262 307 0 17 chrX 28190492 28190608 -138459688 + Lx6 LINE L1 7332 7445 -15 1 800 1439 218 24 42 chrX 28191004 28191334 -138458962 + RLTR21 LTR ERVK 1 324 -1248 1 800 198 0 0 0 chrX 28191351 28191373 -138458923 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1 800 674 184 17 51 chrX 28191381 28191558 -138458738 + RLTR21 LTR ERVK 547 717 -855 1 800 16087 134 211 17 chrX 28191561 28193104 -138457192 + L1Md_F2 LINE L1 446 1958 -3925 1 800 211 71 48 0 chrX 28193104 28193146 -138457150 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 800 16087 79 421 2 chrX 28193146 28195484 -138454812 + L1Md_F2 LINE L1 1959 5586 -297 1 800 7845 76 9 1 chrX 28195484 28196460 -138453836 + L1Md_F2 LINE L1 5587 6570 -12 1 800 1233 211 70 57 chrX 28196460 28196862 -138453434 + RLTR21 LTR ERVK 706 1112 -460 1 800 3031 98 7 7 chrX 28197132 28197553 -138452743 - BGLII LTR ERVK 0 421 1 1 800 2896 212 116 9 chrX 28197553 28198473 -138451823 - MYSERV16_I-int LTR ERVK 0 2326 1308 1 800 2424 188 88 79 chrX 28198496 28198831 -138451465 - RMER3D-int LTR ERVK -1164 1678 1384 1 800 3552 38 2 0 chrX 28198831 28199226 -138451070 + MTA_Mm LTR MaLR 1 396 0 1 800 2424 187 85 60 chrX 28199226 28199572 -138450724 - RMER3D-int LTR ERVK -1459 1383 1016 1 800 503 184 0 63 chrX 28199594 28199785 -138450511 + CT-rich Low_complexity Low_complexity 2 180 0 1 800 620 230 30 40 chrX 28199798 28200096 -138450200 - RMER3D-int LTR ERVK -2036 806 354 1 800 557 213 50 55 chrX 28200182 28200381 -138449915 - RMER3D-int LTR ERVK -1993 849 652 1 800 514 133 0 0 chrX 28200396 28200484 -138449812 - RMER3D-int LTR ERVK -2278 564 489 1 800 1994 264 50 21 chrX 28200748 28201325 -138448971 - Lx7 LINE L1 -1042 6654 6061 1 800 700 265 49 35 chrX 28201351 28201636 -138448660 - Lx7 LINE L1 -1551 6145 5857 1 800 590 283 34 73 chrX 28201938 28202144 -138448152 + B3A SINE B2 1 198 0 2 800 489 34 0 0 chrX 28202213 28202272 -138448024 + (GGAA)n Simple_repeat Simple_repeat 4 62 0 2 800 886 283 10 0 chrX 28202356 28202561 -138447735 - B3 SINE B2 -9 207 1 2 800 823 189 68 20 chrX 28202677 28202893 -138447403 + L1_Mm LINE L1 5252 5479 -694 2 800 607 289 15 116 chrX 28202930 28203388 -138446908 + L1_Mus1 LINE L1 264 608 -6030 2 800 505 255 18 36 chrX 28203436 28203603 -138446693 + L1Md_F LINE L1 566 729 -5790 2 800 2079 201 28 4 chrX 28203584 28204054 -138446242 + L1Md_F LINE L1 628 1108 -5411 2 800 17878 194 11 60 chrX 28204051 28209883 -138440413 + L1_Mus1 LINE L1 1071 6567 0 2 800 1560 201 16 3 chrX 28209896 28210210 -138440086 + Lx2 LINE L1 5823 6140 -857 2 800 3446 177 48 9 chrX 28210212 28211145 -138439151 - Lx3C LINE L1 -660 6316 5353 2 800 10610 183 33 10 chrX 28211157 28214137 -138436159 + Lx4A LINE L1 3725 6779 -279 2 800 420 374 50 55 chrX 28214240 28215021 -138435275 - RMER1C Other Other -458 884 362 2 800 342 424 43 10 chrX 28215116 28215416 -138434880 - RMER1C Other Other -523 819 510 2 800 21 0 0 0 chrX 28215507 28215528 -138434768 + AT_rich Low_complexity Low_complexity 1 21 0 2 800 368 401 26 19 chrX 28215632 28215896 -138434400 - RMER1C Other Other -613 729 464 2 800 262 435 9 26 chrX 28216103 28216334 -138433962 - RMER1C Other Other -581 761 535 2 800 378 0 0 0 chrX 28216772 28216814 -138433482 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 800 262 411 20 13 chrX 28217029 28217182 -138433114 - RMER1C Other Other -691 651 498 2 800 3578 8 0 0 chrX 28217202 28217580 -138432716 - L1Md_T LINE L1 0 6582 6205 2 800 31339 39 0 0 chrX 28217580 28222443 -138427853 + L1Md_Gf LINE L1 95 5054 -832 2 800 373 383 46 10 chrX 28223263 28223458 -138426838 - RMER1C Other Other -679 663 462 2 800 435 404 41 29 chrX 28223588 28224238 -138426058 - RMER1C Other Other -461 881 378 2 800 269 342 42 33 chrX 28224512 28224744 -138425552 - RMER1C Other Other -694 648 414 2 800 582 385 40 17 chrX 28225065 28225411 -138424885 - RMER1C Other Other -468 874 521 2 800 324 433 30 39 chrX 28225915 28226450 -138423846 - RMER1C Other Other -444 898 375 2 800 233 416 20 43 chrX 28226934 28227233 -138423063 - RMER1C Other Other -625 717 426 2 800 3608 167 8 3 chrX 28228003 28228651 -138421645 + L1Md_F2 LINE L1 441 1091 -5633 2 800 2683 96 0 2 chrX 28228649 28229044 -138421252 + L1Md_F2 LINE L1 1977 2370 -3513 2 800 20607 71 0 1 chrX 28229055 28231794 -138418502 + L1Md_F2 LINE L1 2850 5585 -298 2 800 7706 65 4 0 chrX 28231795 28232787 -138417509 + L1Md_F2 LINE L1 5587 6582 0 2 800 4031 75 0 0 chrX 28232787 28233620 -138416676 + L1Md_Gf LINE L1 833 1762 -4124 2 800 800 127 35 21 chrX 28233624 28233769 -138416527 - L1_Mus1 LINE L1 0 6567 6421 2 800 283 303 56 70 chrX 28234049 28234333 -138415963 - RMER17C LTR ERVK -48 362 83 2 800 5860 129 6 27 chrX 28234797 28235764 -138414532 + Lx3A LINE L1 6028 6974 -7 2 800 231 320 62 37 chrX 28237078 28237240 -138413056 + L2 LINE L2 1494 1659 -1760 2 800 181 347 52 10 chrX 28237603 28237699 -138412597 + L2 LINE L2 1926 2025 -1394 2 800 574 320 40 15 chrX 28237713 28237920 -138412376 - B4A SINE B4 -2 290 83 2 800 228 86 0 0 chrX 28237966 28238001 -138412295 + (TGG)n Simple_repeat Simple_repeat 1 35 0 2 800 346 325 115 39 chrX 28238097 28238331 -138411965 + L2 LINE L2 2049 2300 -1119 2 800 4625 131 12 19 chrX 28238336 28239133 -138411163 + YREP_Mm Unknown Unknown 986 1777 -35 2 800 454 289 0 0 chrX 28239976 28240080 -138410216 + B3 SINE B2 98 201 -15 2 800 384 252 75 8 chrX 28240140 28240260 -138410036 + B1F SINE Alu 21 148 -1 2 800 912 237 19 0 chrX 28240406 28240613 -138409683 + B3 SINE B2 1 211 -5 2 800 624 327 97 34 chrX 28240846 28241115 -138409181 + B4A SINE B4 4 289 -3 2 800 17406 175 37 49 chrX 28241245 28243938 -138406358 + L1VL2 LINE L1 300 2807 -3076 2 800 925 119 0 0 chrX 28243938 28244072 -138406224 + B1_Mus2 SINE Alu 1 134 -13 2 800 267 93 0 0 chrX 28244082 28244125 -138406171 + (TAA)n Simple_repeat Simple_repeat 2 44 0 2 800 17406 160 20 38 chrX 28244125 28246081 -138404215 + L1VL2 LINE L1 2809 4755 -1128 2 800 5186 145 19 1 chrX 28246082 28246933 -138403363 + Lx LINE L1 5787 6652 -2 2 800 21 0 0 0 chrX 28246933 28246954 -138403342 + AT_rich Low_complexity Low_complexity 1 21 0 2 800 26 88 0 0 chrX 28246997 28247065 -138403231 + AT_rich Low_complexity Low_complexity 1 68 0 2 800 375 23 0 0 chrX 28248229 28248273 -138402023 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 800 399 21 0 0 chrX 28248274 28248322 -138401974 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 800 280 259 95 69 chrX 28248642 28248758 -138401538 + B1F SINE Alu 29 147 -2 2 800 225 333 47 70 chrX 28248753 28248773 -138401523 + ID_B1 SINE B4 70 195 -29 2 800 257 283 101 28 chrX 28248773 28248882 -138401414 + B1F SINE Alu 1 117 -32 2 800 765 294 39 24 chrX 28249665 28249871 -138400425 - B3 SINE B2 -6 210 2 2 800 943 120 14 0 chrX 28250126 28250268 -138400028 - B1_Mus1 SINE Alu -1 147 4 2 800 358 264 162 10 chrX 28250269 28250467 -138399829 - B4 SINE B4 -62 230 3 2 800 21 36 0 0 chrX 28251103 28251131 -138399165 + AT_rich Low_complexity Low_complexity 1 28 0 2 800 321 322 49 8 chrX 28251379 28251501 -138398795 - B1F SINE Alu -3 146 20 2 800 25361 147 6 2 chrX 28251751 28256922 -138393374 + L1_Mus3 LINE L1 1445 6634 -4 2 800 208 147 0 0 chrX 28257353 28257387 -138392909 + (A)n Simple_repeat Simple_repeat 1 34 0 2 800 360 262 0 0 chrX 28257565 28257668 -138392628 + (TA)n Simple_repeat Simple_repeat 2 104 0 2 800 264 350 20 10 chrX 28258243 28258344 -138391952 + PB1D10 SINE Alu 1 102 -15 2 800 235 352 22 11 chrX 28259248 28259337 -138390959 - B3 SINE B2 -14 202 113 2 800 213 284 0 69 chrX 28259341 28259413 -138390883 - B4A SINE B4 -139 153 87 2 800 452 305 65 13 chrX 28259422 28259575 -138390721 - B3 SINE B2 -53 163 3 2 800 405 0 0 0 chrX 28259659 28259704 -138390592 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 800 6972 104 24 15 chrX 28259824 28261612 -138388684 - L1_Mus1 LINE L1 0 6567 4778 2 800 7281 81 8 5 chrX 28261593 28262770 -138387526 - L1Md_F2 LINE L1 0 6582 5405 2 800 17654 159 11 16 chrX 28262768 28266101 -138384195 - L1_Mus1 LINE L1 -1075 4808 1492 2 800 6791 158 27 6 chrX 28266099 28267422 -138382874 - L1_Mus3 LINE L1 -690 5948 4601 2 800 607 207 9 0 chrX 28267421 28267532 -138382764 - Lx4A LINE L1 -228 6830 6719 2 800 2093 262 69 15 chrX 28268388 28269000 -138381296 - Lx2B LINE L1 -14 6986 6342 2 800 3091 158 66 13 chrX 28268997 28269157 -138381139 + L1_Mur2 LINE L1 4537 4730 -1147 2 800 188 35 35 0 chrX 28269157 28269186 -138381110 + (TAA)n Simple_repeat Simple_repeat 1 30 0 2 800 3091 158 66 13 chrX 28269186 28269635 -138380661 + L1_Mur2 LINE L1 4731 5178 -699 2 800 486 138 0 92 chrX 28269808 28269928 -138380368 - URR1B DNA MER1_type 0 225 117 2 800 327 252 45 0 chrX 28270302 28270429 -138379867 + RLTR1B LTR ERV1 259 454 -170 2 800 24 32 0 0 chrX 28270567 28270598 -138379698 + AT_rich Low_complexity Low_complexity 1 31 0 2 800 1826 237 7 15 chrX 28270738 28271336 -138378960 - Lx6 LINE L1 -1352 6108 5512 2 800 25816 49 150 3 chrX 28271335 28276641 -138373655 - L1Md_T LINE L1 -1 6584 335 2 800 1448 242 44 2 chrX 28276637 28277047 -138373249 - Lx6 LINE L1 -349 5531 5105 2 800 1208 217 37 9 chrX 28277052 28277378 -138372918 - Lx6 LINE L1 -2035 3845 3511 2 800 698 240 57 33 chrX 28277378 28277542 -138372754 - Lx6 LINE L1 -3397 2480 2324 2 800 603 0 0 0 chrX 28277542 28277609 -138372687 + (TC)n Simple_repeat Simple_repeat 2 68 0 2 800 698 240 57 33 chrX 28277609 28277655 -138372641 - Lx6 LINE L1 -3554 2323 2266 2 800 653 322 50 18 chrX 28277661 28277879 -138372417 - ORR1D2 LTR MaLR -145 225 1 2 800 423 389 4 0 chrX 28277881 28278115 -138372181 + Lx8 LINE L1 6956 7190 -283 2 800 941 287 47 22 chrX 28278220 28278580 -138371716 + ORR1D2 LTR MaLR 1 369 -1 2 800 441 264 8 23 chrX 28278735 28278867 -138371429 + Lx8 LINE L1 6640 6769 -704 2 800 22 70 0 0 chrX 28278958 28279001 -138371295 + AT_rich Low_complexity Low_complexity 1 43 0 2 800 233 244 12 25 chrX 28279122 28279202 -138371094 - Lx9 LINE L1 -1398 6246 6168 2 800 225 442 0 0 chrX 28279255 28279393 -138370903 + RMER1C Other Other 535 672 -670 2 800 260 379 0 0 chrX 28279716 28279832 -138370464 + RMER1C Other Other 537 652 -690 2 800 231 441 4 4 chrX 28279940 28280170 -138370126 + RMER1C Other Other 412 641 -701 2 800 275 52 33 33 chrX 28280611 28280671 -138369625 + (CAAAA)n Simple_repeat Simple_repeat 3 62 0 2 800 260 358 6 16 chrX 28281936 28282149 -138368147 + RMER1C Other Other 626 874 -468 2 800 32744 72 4 8 chrX 28282513 28287160 -138363136 - L1Md_F3 LINE L1 0 6584 1970 2 800 207 0 0 0 chrX 28287160 28287183 -138363113 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 800 32744 123 11 29 chrX 28287183 28288946 -138361350 - L1Md_F3 LINE L1 -3914 1969 233 2 800 210 37 0 0 chrX 28290150 28290177 -138360119 + (A)n Simple_repeat Simple_repeat 1 27 0 2 800 490 383 38 18 chrX 28291597 28292045 -138358251 + RMER1C Other Other 375 874 -468 2 800 229 403 35 22 chrX 28292171 28292402 -138357894 + RMER1C Other Other 504 737 -605 2 800 365 0 22 0 chrX 28292511 28292556 -138357740 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 800 297 0 0 0 chrX 28292556 28292588 -138357708 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 800 328 436 21 19 chrX 28292948 28293487 -138356809 + RMER1C Other Other 378 833 -509 2 800 262 402 44 6 chrX 28293619 28293799 -138356497 + RMER1C Other Other 419 576 -766 2 800 275 423 22 28 chrX 28294432 28294975 -138355321 + RMER1C Other Other 378 726 -616 2 800 245 428 12 29 chrX 28295447 28295791 -138354505 + RMER1C Other Other 509 846 -496 2 800 300 405 26 19 chrX 28295907 28296171 -138354125 + RMER1C Other Other 464 729 -613 2 800 360 423 12 0 chrX 28296447 28296695 -138353601 + RMER1C Other Other 421 671 -671 2 800 290 393 25 31 chrX 28296803 28297307 -138352989 + RMER1C Other Other 374 865 -477 2 800 23869 44 0 0 chrX 28297411 28300526 -138349770 - L1_Mm LINE L1 -1059 4824 1710 2 800 9874 183 30 12 chrX 28300526 28303372 -138346924 - Lx4A LINE L1 -427 6631 3725 2 800 3658 177 50 5 chrX 28303384 28304416 -138345880 + Lx3C LINE L1 5353 6423 -553 2 800 931 135 0 0 chrX 28304409 28304565 -138345731 + L1_Mm LINE L1 4206 4361 -1522 3 800 1615 63 13 5 chrX 28304577 28304801 -138345495 - MT2_Mm LTR ERVL 0 493 268 3 800 24377 131 18 47 chrX 28304801 28305294 -138345002 - L1Md_F LINE L1 -145 5738 5245 3 800 648 0 0 0 chrX 28305294 28305366 -138344930 + (TA)n Simple_repeat Simple_repeat 2 73 0 3 800 24377 132 17 49 chrX 28305366 28309703 -138340593 - L1Md_F LINE L1 -639 5244 1080 3 800 2075 204 11 0 chrX 28309706 28310176 -138340120 - L1Md_F LINE L1 -5415 1201 727 3 800 424 254 16 8 chrX 28310187 28310314 -138339982 - L1Md_F LINE L1 -5814 802 675 3 800 488 294 25 109 chrX 28310345 28310823 -138339473 - L1VL1 LINE L1 -5941 477 1 3 800 876 156 62 19 chrX 28310869 28311078 -138339218 - L1_Mm LINE L1 -432 5451 5234 3 800 1077 267 82 0 chrX 28311243 28311535 -138338761 + MER2 DNA MER2_type 6 321 -24 3 801 871 273 10 0 chrX 28311955 28312160 -138338136 + B3 SINE B2 1 207 -9 3 801 327 25 0 0 chrX 28312247 28312287 -138338009 + (TTCC)n Simple_repeat Simple_repeat 2 41 0 3 801 602 271 29 68 chrX 28312355 28312561 -138337735 - B3A SINE B2 0 198 1 3 801 602 270 51 29 chrX 28312863 28313138 -138337158 + Lx7 LINE L1 5857 6137 -1559 3 801 1832 257 47 21 chrX 28313173 28313749 -138336547 + Lx7 LINE L1 6064 6654 -1042 3 801 462 148 0 0 chrX 28314013 28314101 -138336195 + RMER3D-int LTR ERVK 489 564 -2278 3 801 597 212 25 40 chrX 28314116 28314317 -138335979 + RMER3D-int LTR ERVK 652 849 -1993 3 801 469 229 72 37 chrX 28314383 28314705 -138335591 + RMER3D-int LTR ERVK 354 804 -2038 3 801 547 166 76 17 chrX 28314713 28314951 -138335345 + GA-rich Low_complexity Low_complexity 1 251 0 3 801 1523 183 165 29 chrX 28314996 28315318 -138334978 + RMER3D-int LTR ERVK 1014 1383 -1459 3 801 3231 51 2 0 chrX 28315318 28315713 -138334583 - MTA_Mm LTR MaLR 0 396 1 3 801 1523 193 13 36 chrX 28315713 28315870 -138334426 + RMER3D-int LTR ERVK 1384 1533 -1309 3 801 529 221 40 33 chrX 28315898 28316048 -138334248 + RMER3D-int LTR ERVK 1528 1678 -1164 3 801 2659 200 117 14 chrX 28316070 28316994 -138333302 + MYSERV16_I-int LTR ERVK 1308 2326 0 3 801 2802 103 7 2 chrX 28316994 28317413 -138332883 + BGLII LTR ERVK 1 421 0 3 801 1280 221 64 36 chrX 28317652 28318085 -138332211 - RLTR21 LTR ERVK -150 1254 706 3 801 11496 82 5 2 chrX 28318092 28320425 -138329871 - L1Md_F2 LINE L1 -19 6563 4225 3 801 12704 113 5 33 chrX 28320408 28323226 -138327070 - L1Md_F2 LINE L1 -2718 3165 217 3 801 850 154 11 51 chrX 28323229 28323407 -138326889 - RLTR21 LTR ERVK -855 717 547 3 801 309 26 0 0 chrX 28323414 28323452 -138326844 + (A)n Simple_repeat Simple_repeat 1 38 0 3 801 1436 220 22 40 chrX 28323469 28323791 -138326505 - RLTR21 LTR ERVK -1248 324 9 3 801 1574 259 21 28 chrX 28324297 28324531 -138325765 - Lx6 LINE L1 -1326 6134 5904 3 801 2039 196 17 14 chrX 28324531 28324951 -138325345 - MTC LTR MaLR 0 421 1 3 801 1574 259 21 28 chrX 28324951 28325248 -138325048 - Lx6 LINE L1 -1557 5903 5607 3 801 1006 206 25 3 chrX 28325255 28325538 -138324758 - L1_Mur3 LINE L1 -2593 3287 2999 3 801 3674 142 21 24 chrX 28325539 28326069 -138324227 - L1_Mus3 LINE L1 -8 6630 6101 3 801 2745 67 0 0 chrX 28326069 28326411 -138323885 - ORR1A1 LTR MaLR -4 342 1 3 801 3674 142 21 24 chrX 28326411 28326535 -138323761 - L1_Mus3 LINE L1 -538 6100 5978 3 801 4282 63 40 6 chrX 28326535 28327307 -138322989 + L1Md_F2 LINE L1 5273 6062 -520 3 801 324 78 15 15 chrX 28327307 28327372 -138322924 + L1Md_F2 LINE L1 6515 6579 -3 3 801 1094 318 7 31 chrX 28327372 28327794 -138322502 - RodERV21-int LTR ERV1 -3327 1664 1253 3 801 7985 13 0 0 chrX 28328970 28329924 -138320372 + L1Md_A LINE L1 4633 5586 -297 3 801 8709 18 0 0 chrX 28329924 28330915 -138319381 + L1Md_A LINE L1 5587 6577 -5 3 801 729 61 0 115 chrX 28330942 28331072 -138319224 - RLTRETN_Mm LTR ERVK -207 115 1 3 801 6535 198 43 29 chrX 28331072 28332578 -138317718 - RLTR14-int LTR ERV1 -596 4721 3195 3 801 1123 178 187 45 chrX 28332578 28332936 -138317360 + RLTR9E LTR ERVK 1 409 0 3 801 645 234 17 69 chrX 28332938 28333261 -138317035 + ETnERV2-int LTR ERVK 2 372 -2942 3 801 1730 169 48 17 chrX 28333802 28334248 -138316048 + ETnERV2-int LTR ERVK 1678 2085 -5321 3 801 2538 182 34 30 chrX 28334272 28334926 -138315370 + ETnERV2-int LTR ERVK 1934 3123 -4283 3 801 31457 86 2 3 chrX 28334927 28340406 -138309890 - L1Md_F2 LINE L1 -14 6568 1105 3 801 33096 80 2 13 chrX 28340397 28346535 -138303761 - L1Md_F2 LINE L1 0 6582 519 3 801 6461 91 4 6 chrX 28346536 28347469 -138302827 - L1Md_F LINE L1 -5494 1025 95 3 801 635 256 31 143 chrX 28347533 28347626 -138302670 + MMETn-int LTR ERVK 5040 5120 -2124 3 801 4799 63 0 7 chrX 28347626 28348235 -138302061 + L1Md_F2 LINE L1 5966 6570 -12 3 801 2873 182 15 43 chrX 28348235 28349179 -138301117 + MMETn-int LTR ERVK 2541 3719 -1125 3 801 726 195 0 0 chrX 28349174 28349297 -138300999 + MMETn-int LTR ERVK 6539 6661 -745 3 801 3082 206 51 16 chrX 28349327 28350066 -138300230 - RLTR14-int LTR ERV1 -2117 3200 2436 3 801 1874 229 56 31 chrX 28351521 28352043 -138298253 + RLTR40 LTR ERVK 22 556 -261 3 801 392 178 9 0 chrX 28352045 28352152 -138298144 + GA-rich Low_complexity Low_complexity 2 109 0 3 801 636 280 52 44 chrX 28352152 28352339 -138297957 + RLTR40 LTR ERVK 566 752 -65 3 801 6177 91 34 2 chrX 28352339 28352753 -138297543 - RLTR13B1 LTR ERVK 0 893 476 3 801 342 0 0 0 chrX 28352753 28352791 -138297505 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 801 6177 91 34 2 chrX 28352791 28353242 -138297054 - RLTR13B1 LTR ERVK -418 475 3 3 801 636 280 52 44 chrX 28353242 28353304 -138296992 + RLTR40 LTR ERVK 753 817 0 3 801 275 0 0 28 chrX 28353495 28353531 -138296765 + (TAA)n Simple_repeat Simple_repeat 2 36 0 3 801 681 232 57 10 chrX 28355062 28355254 -138295042 - Lx9 LINE L1 -243 7401 7201 3 801 398 191 0 0 chrX 28355254 28355338 -138294958 + Lx9 LINE L1 7554 7637 -7 3 801 473 287 13 0 chrX 28355347 28355497 -138294799 + Lx5 LINE L1 6825 6976 -74 3 801 393 22 0 0 chrX 28355505 28355551 -138294745 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 3 801 597 231 35 14 chrX 28355563 28355708 -138294588 + B1_Mur2 SINE Alu 1 148 -1 3 801 1935 148 30 0 chrX 28355737 28356074 -138294222 + L1_Mus3 LINE L1 6284 6630 -8 3 801 28 48 0 0 chrX 28356087 28356129 -138294167 + AT_rich Low_complexity Low_complexity 1 42 0 3 801 691 238 7 12 chrX 28356258 28356443 -138293853 + Lx4B LINE L1 6809 6994 -64 3 801 2685 179 32 2 chrX 28356505 28357097 -138293199 - L1_Mur2 LINE L1 -1176 4701 4092 3 801 10123 143 34 22 chrX 28357097 28358467 -138291829 - RLTR22_Mur LTR ERVK 0 1848 461 3 801 457 55 0 27 chrX 28358467 28358542 -138291754 + (TAG)n Simple_repeat Simple_repeat 3 75 0 3 801 10123 143 34 22 chrX 28358542 28358998 -138291298 - RLTR22_Mur LTR ERVK -1388 460 3 3 801 795 158 199 0 chrX 28358998 28359239 -138291057 - L1_Mur2 LINE L1 -1782 4095 3807 3 801 1375 138 25 4 chrX 28359283 28359524 -138290772 + L1_Mus4 LINE L1 6391 6636 0 3 801 180 0 0 0 chrX 28360013 28360033 -138290263 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 3 801 24 0 0 0 chrX 28361426 28361450 -138288846 + AT_rich Low_complexity Low_complexity 1 24 0 3 801 367 261 22 7 chrX 28361735 28361870 -138288426 + L1_Mur2 LINE L1 4334 4470 -1407 3 801 762 329 42 19 chrX 28361875 28362310 -138287986 + Lx6 LINE L1 6506 7296 -164 3 801 1296 204 20 92 chrX 28362293 28362741 -138287555 - L1_Mur2 LINE L1 -2142 3735 3320 3 801 1156 76 0 0 chrX 28362743 28362901 -138287395 - L1_Mus1 LINE L1 0 6567 6410 3 801 20374 131 6 6 chrX 28362904 28366746 -138283550 - L1_Mus1 LINE L1 -434 6133 2294 3 801 459 207 11 0 chrX 28366747 28366834 -138283462 + L1VL1 LINE L1 195 282 -6140 3 801 29799 55 1 4 chrX 28366829 28370856 -138279440 + L1Md_F2 LINE L1 1568 5585 -298 3 801 7641 64 9 0 chrX 28370857 28371832 -138278464 + L1Md_F2 LINE L1 5587 6570 -12 3 801 1325 203 75 44 chrX 28371832 28372261 -138278035 + RLTR21 LTR ERVK 706 1251 -153 3 801 2711 102 19 2 chrX 28372502 28372916 -138277380 - BGLII LTR ERVK 0 421 1 3 801 2419 214 119 7 chrX 28372916 28373832 -138276464 - MYSERV16_I-int LTR ERVK 0 2326 1308 3 801 1920 211 88 78 chrX 28373854 28374189 -138276107 - RMER3D-int LTR ERVK -1164 1678 1384 3 801 3192 53 5 0 chrX 28374189 28374583 -138275713 + MTA_Mm LTR MaLR 1 396 0 3 801 1920 211 88 78 chrX 28374583 28374903 -138275393 - RMER3D-int LTR ERVK -1459 1383 1016 3 801 483 158 11 68 chrX 28374950 28375140 -138275156 + CT-rich Low_complexity Low_complexity 2 180 0 3 801 361 130 38 25 chrX 28375153 28375232 -138275064 - RMER3D-int LTR ERVK -2274 568 489 3 801 556 179 16 35 chrX 28375304 28375451 -138274845 - RMER3D-int LTR ERVK -2069 773 650 3 801 580 218 25 40 chrX 28375537 28375738 -138274558 - RMER3D-int LTR ERVK -1993 849 652 3 801 445 145 0 0 chrX 28375753 28375841 -138274455 - RMER3D-int LTR ERVK -2278 564 489 3 801 1775 267 50 19 chrX 28376105 28376681 -138273615 - Lx7 LINE L1 -1042 6654 6061 3 801 596 244 69 47 chrX 28376717 28376992 -138273304 - Lx7 LINE L1 -1559 6137 5857 3 801 1089 264 82 0 chrX 28377391 28377683 -138272613 - MER2 DNA MER2_type -24 321 6 3 801 851 162 62 19 chrX 28377848 28378056 -138272240 + L1_Mm LINE L1 5234 5450 -433 3 801 531 270 30 126 chrX 28378102 28378580 -138271716 + L1VL1 LINE L1 273 693 -5941 3 801 452 238 16 8 chrX 28378611 28378738 -138271558 + L1Md_F LINE L1 578 705 -5814 3 801 2074 202 11 2 chrX 28378749 28379224 -138271072 + L1Md_F LINE L1 630 1108 -5411 3 801 23371 134 19 68 chrX 28379230 28383667 -138266629 + L1VL1 LINE L1 1080 5234 -649 3 801 576 0 0 0 chrX 28383667 28383731 -138266565 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 801 23371 134 19 70 chrX 28383731 28384223 -138266073 + L1VL1 LINE L1 5235 5737 -146 3 801 1615 63 13 5 chrX 28384223 28384447 -138265849 + MT2_Mm LTR ERVL 268 493 0 3 801 957 128 0 0 chrX 28384459 28384615 -138265681 - L1_Mm LINE L1 -1522 4361 4206 3 801 3675 176 50 5 chrX 28384608 28385639 -138264657 - Lx3C LINE L1 -553 6423 5353 3 801 10144 184 30 8 chrX 28385651 28388633 -138261663 + Lx4B LINE L1 3725 6782 -276 3 801 286 397 36 17 chrX 28388894 28389447 -138260849 - RMER1C Other Other -477 865 466 3 801 366 423 12 0 chrX 28389608 28389856 -138260440 - RMER1C Other Other -671 671 421 3 801 283 409 26 19 chrX 28390135 28390399 -138259897 - RMER1C Other Other -613 729 464 3 801 284 422 12 32 chrX 28390515 28390860 -138259436 - RMER1C Other Other -496 846 509 3 801 288 390 17 50 chrX 28391496 28391677 -138258619 - RMER1C Other Other -691 651 383 3 801 256 433 18 14 chrX 28393050 28393329 -138256967 - RMER1C Other Other -478 864 585 3 801 387 0 0 0 chrX 28393717 28393760 -138256536 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 801 254 328 36 29 chrX 28393876 28394014 -138256282 - RMER1C Other Other -753 589 451 3 801 388 405 41 19 chrX 28394231 28394681 -138255615 - RMER1C Other Other -468 874 412 3 801 299 419 23 17 chrX 28395184 28395531 -138254765 - RMER1C Other Other -507 835 487 3 801 30832 86 4 16 chrX 28397341 28402766 -138247530 + L1Md_F3 LINE L1 233 5586 -297 3 801 7680 68 6 0 chrX 28402766 28403758 -138246538 + L1Md_F3 LINE L1 5587 6584 0 3 801 347 261 139 6 chrX 28405602 28405760 -138244536 - L1MEf LINE L1 -4140 2060 1882 3 801 288 372 0 0 chrX 28406457 28406578 -138243718 - RMER1C Other Other -685 657 537 3 801 225 442 0 0 chrX 28406902 28407040 -138243256 - RMER1C Other Other -670 672 535 3 801 233 244 12 25 chrX 28407093 28407173 -138243123 + Lx9 LINE L1 6168 6246 -1398 3 801 22 70 0 0 chrX 28407294 28407337 -138242959 + AT_rich Low_complexity Low_complexity 1 43 0 3 801 441 264 8 23 chrX 28407428 28407560 -138242736 - Lx8 LINE L1 -704 6769 6640 3 801 841 292 35 35 chrX 28407715 28408084 -138242212 - ORR1D2 LTR MaLR -1 369 1 3 801 422 389 4 0 chrX 28408188 28408422 -138241874 - Lx8 LINE L1 -283 7190 6956 3 801 630 327 47 14 chrX 28408424 28408635 -138241661 + ORR1D2 LTR MaLR 1 218 -152 3 801 536 277 47 24 chrX 28408648 28408696 -138241600 + Lx6 LINE L1 2265 2322 -3555 3 801 387 0 0 0 chrX 28408696 28408739 -138241557 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 801 536 277 47 24 chrX 28408739 28408901 -138241395 + Lx6 LINE L1 2323 2479 -3398 3 801 1112 217 40 12 chrX 28408901 28409227 -138241069 + Lx6 LINE L1 3510 3844 -2033 3 801 2754 246 21 14 chrX 28409232 28410225 -138240071 + Lx6 LINE L1 5105 6108 -1352 3 801 354 284 71 47 chrX 28410534 28410704 -138239592 - RLTR1B LTR ERV1 -173 339 166 4 801 433 148 78 19 chrX 28411037 28411065 -138239231 + URR1B DNA MER1_type 117 144 -81 4 801 396 0 0 0 chrX 28411065 28411109 -138239187 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 801 433 148 78 19 chrX 28411109 28411183 -138239113 + URR1B DNA MER1_type 145 224 -1 4 801 2907 158 66 13 chrX 28411356 28411805 -138238491 - L1_Mur2 LINE L1 -699 5178 4731 4 801 216 0 0 0 chrX 28411805 28411829 -138238467 + (TTA)n Simple_repeat Simple_repeat 1 24 0 4 801 2907 158 66 13 chrX 28411829 28411989 -138238307 - L1_Mur2 LINE L1 -1147 4730 4537 4 801 2063 255 68 3 chrX 28411986 28412592 -138237704 + Lx2B LINE L1 6342 6986 -14 4 801 589 189 9 0 chrX 28413445 28413556 -138236740 + Lx4A LINE L1 6719 6830 -228 4 801 6376 158 27 12 chrX 28413555 28414887 -138235409 + L1_Mus3 LINE L1 4601 5948 -690 4 801 22326 146 14 54 chrX 28414885 28418390 -138231906 + L1_Mus1 LINE L1 1492 4795 -1088 4 801 6916 78 31 14 chrX 28418390 28419369 -138230927 + L1Md_F2 LINE L1 5588 6582 0 4 801 22326 118 20 41 chrX 28419369 28421144 -138229152 + L1_Mus1 LINE L1 4796 6567 0 4 801 297 0 0 0 chrX 28421264 28421297 -138228999 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 801 1813 138 254 31 chrX 28421386 28421834 -138228462 - RLTR6_Mm LTR ERV1 -70 584 37 4 801 60275 36 23 1 chrX 28421947 28429557 -138220739 - RLTR6-int LTR ERV1 0 7778 2 4 801 1872 146 244 30 chrX 28429559 28430026 -138220270 - RLTR6_Mm LTR ERV1 -51 603 37 4 801 481 293 66 13 chrX 28430140 28430292 -138220004 + B3 SINE B2 4 163 -53 4 801 233 278 0 65 chrX 28430296 28430373 -138219923 + B4A SINE B4 82 153 -139 4 801 238 352 22 11 chrX 28430377 28430466 -138219830 + B3 SINE B2 113 202 -14 4 801 247 357 20 10 chrX 28431370 28431469 -138218827 - PB1D10 SINE Alu -15 102 3 4 801 266 294 15 0 chrX 28431407 28431475 -138218821 - B4A SINE B4 -142 150 82 4 801 204 40 0 0 chrX 28432057 28432082 -138218214 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 801 447 106 0 0 chrX 28432082 28432147 -138218149 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 4 801 180 158 0 0 chrX 28432313 28432351 -138217945 + T-rich Low_complexity Low_complexity 1 38 0 4 801 23979 146 6 2 chrX 28432782 28437953 -138212343 - L1_Mus3 LINE L1 -4 6634 1445 4 801 267 355 49 8 chrX 28438204 28438326 -138211970 + B1F SINE Alu 20 146 -3 4 801 213 296 0 0 chrX 28438630 28438674 -138211622 - ID4 SINE ID -36 47 4 4 801 230 310 127 0 chrX 28438907 28438978 -138211318 + ID4 SINE ID 4 83 0 4 801 371 251 160 10 chrX 28439240 28439440 -138210856 + B4 SINE B4 1 230 -62 4 801 1040 98 7 0 chrX 28439441 28439584 -138210712 + B1_Mus1 SINE Alu 4 147 -1 4 801 864 291 14 24 chrX 28439841 28440052 -138210244 + B3 SINE B2 2 210 -6 4 801 256 292 101 28 chrX 28440835 28440944 -138209352 - B1F SINE Alu -32 117 1 4 801 235 333 47 70 chrX 28440944 28440964 -138209332 - ID_B1 SINE B4 -29 195 70 4 801 260 278 134 60 chrX 28440959 28441093 -138209203 - B1F SINE Alu -2 147 4 4 801 24 0 0 0 chrX 28441093 28441117 -138209179 + AT_rich Low_complexity Low_complexity 1 24 0 4 801 432 0 0 0 chrX 28441395 28441443 -138208853 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 801 501 17 0 0 chrX 28441444 28441502 -138208794 + (GA)n Simple_repeat Simple_repeat 2 59 0 4 802 5274 140 19 1 chrX 28442797 28443648 -138206648 - Lx LINE L1 -2 6652 5787 4 802 15827 159 19 57 chrX 28443649 28445588 -138204708 - L1VL2 LINE L1 -1127 4756 2824 4 802 405 0 0 0 chrX 28445588 28445633 -138204663 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 802 15827 159 19 57 chrX 28445633 28445724 -138204572 - L1VL2 LINE L1 -3060 2823 2808 4 802 955 119 0 0 chrX 28445724 28445858 -138204438 - B1_Mus2 SINE Alu -13 134 1 4 802 15827 176 33 62 chrX 28445858 28448555 -138201741 - L1VL2 LINE L1 -3076 2807 300 4 802 22 56 0 0 chrX 28448648 28448684 -138201612 + AT_rich Low_complexity Low_complexity 1 36 0 4 802 658 319 97 34 chrX 28448693 28448962 -138201334 - B4A SINE B4 -3 289 4 4 802 966 227 19 0 chrX 28449195 28449402 -138200894 - B3 SINE B2 -5 211 1 4 802 352 269 75 8 chrX 28449548 28449668 -138200628 - B1F SINE Alu -1 148 21 4 802 456 289 0 0 chrX 28449728 28449832 -138200464 - B3 SINE B2 -15 201 98 4 802 4634 129 15 18 chrX 28450672 28451466 -138198830 - YREP_Mm Unknown Unknown -35 1777 986 4 802 331 341 111 34 chrX 28451471 28451705 -138198591 - L2 LINE L2 -1119 2300 2049 4 802 207 114 0 0 chrX 28451801 28451836 -138198460 + (CCA)n Simple_repeat Simple_repeat 1 35 0 4 802 549 338 39 7 chrX 28451934 28452089 -138198207 + B4A SINE B4 131 290 -2 4 802 205 364 30 23 chrX 28452360 28452492 -138197804 - L2 LINE L2 -1769 1650 1518 4 802 5129 126 78 32 chrX 28453830 28454757 -138195539 - Lx3A LINE L1 -7 6974 6006 4 802 305 307 56 70 chrX 28455198 28455482 -138194814 + RMER17C LTR ERVK 83 362 -48 4 802 36650 9 0 1 chrX 28455636 28461423 -138188873 + L1Md_A LINE L1 1 5586 -297 4 802 9015 5 0 0 chrX 28461423 28462419 -138187877 + L1Md_A LINE L1 5587 6582 0 4 802 812 120 35 21 chrX 28462586 28462731 -138187565 + L1_Mus1 LINE L1 6421 6567 0 4 802 3572 79 8 30 chrX 28462735 28463562 -138186734 - L1Md_A LINE L1 -4124 1759 964 4 802 29542 81 5 41 chrX 28463563 28466666 -138183630 - L1Md_F2 LINE L1 -12 6570 3464 4 802 1136 90 73 0 chrX 28466666 28466844 -138183452 - B2_Mm2 SINE B2 0 195 5 4 802 29542 107 16 49 chrX 28466844 28470277 -138180019 - L1Md_F2 LINE L1 -2420 3463 273 4 802 1280 183 52 0 chrX 28470275 28470526 -138179770 - L1VL1 LINE L1 -6156 266 3 4 802 20678 136 8 3 chrX 28470527 28471364 -138178932 + L1_Mus1 LINE L1 2294 3132 -2751 4 802 210 37 0 0 chrX 28471364 28471391 -138178905 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 802 20678 124 7 3 chrX 28471391 28474362 -138175934 + L1_Mus1 LINE L1 3133 6118 -449 4 802 1160 109 17 0 chrX 28474363 28474538 -138175758 + L1_Mus1 LINE L1 6390 6567 0 4 802 1415 199 20 82 chrX 28474540 28474990 -138175306 + L1_Mur2 LINE L1 3320 3741 -2136 4 802 718 331 43 26 chrX 28474967 28475401 -138174895 - Lx6 LINE L1 -164 7296 6506 4 802 268 284 22 7 chrX 28475406 28475541 -138174755 - L1_Mur2 LINE L1 -1407 4470 4334 4 802 24 0 0 0 chrX 28475825 28475849 -138174447 + AT_rich Low_complexity Low_complexity 1 24 0 4 802 180 0 0 0 chrX 28477240 28477260 -138173036 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 4 802 11165 34 0 0 chrX 28477628 28479682 -138170614 - L1Md_T LINE L1 0 6582 4529 4 802 1329 142 29 4 chrX 28479714 28479954 -138170342 - L1_Mus4 LINE L1 0 6636 6391 4 802 1169 194 17 14 chrX 28479998 28480286 -138170010 + L1_Mur2 LINE L1 3807 4095 -1782 4 802 10089 141 39 25 chrX 28480286 28480733 -138169563 + RLTR22_Mur LTR ERVK 1 444 -1404 4 802 697 73 0 18 chrX 28480733 28480844 -138169452 + (CTA)n Simple_repeat Simple_repeat 3 111 0 4 802 10089 141 39 25 chrX 28480844 28482219 -138168077 + RLTR22_Mur LTR ERVK 445 1847 -1 4 802 2711 175 37 2 chrX 28482219 28482808 -138167488 + L1_Mur2 LINE L1 4092 4701 -1176 4 802 717 256 19 14 chrX 28482844 28483058 -138167238 - Lx4B LINE L1 -35 7023 6809 4 802 227 263 0 0 chrX 28483067 28483124 -138167172 + T-rich Low_complexity Low_complexity 4 60 0 4 802 26 50 0 0 chrX 28483190 28483230 -138167066 + AT_rich Low_complexity Low_complexity 1 40 0 4 802 1935 156 45 0 chrX 28483242 28483595 -138166701 - L1_Mus3 LINE L1 -8 6630 6262 4 802 243 0 0 0 chrX 28483607 28483634 -138166662 + (T)n Simple_repeat Simple_repeat 1 27 0 4 802 660 208 34 14 chrX 28483634 28483780 -138166516 - B1_Mur3 SINE Alu 0 149 1 4 802 423 0 0 0 chrX 28483795 28483842 -138166454 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 4 802 488 287 13 0 chrX 28483850 28484000 -138166296 - Lx5 LINE L1 -74 6976 6825 4 802 401 191 0 0 chrX 28484009 28484093 -138166203 - Lx9 LINE L1 -7 7637 7554 4 802 648 237 57 10 chrX 28484093 28484285 -138166011 + Lx9 LINE L1 7201 7401 -243 4 802 198 0 0 0 chrX 28485472 28485494 -138164802 + (T)n Simple_repeat Simple_repeat 1 22 0 4 802 1276 27 0 0 chrX 28485494 28485641 -138164655 - B1_Mus2 SINE Alu 0 147 1 4 802 225 0 0 0 chrX 28486014 28486039 -138164257 + (TTC)n Simple_repeat Simple_repeat 2 26 0 4 802 189 0 0 0 chrX 28486039 28486060 -138164236 + (TTA)n Simple_repeat Simple_repeat 2 22 0 4 802 1964 244 53 121 chrX 28486251 28486313 -138163983 - RLTR40 LTR ERVK 0 817 753 4 802 6252 94 24 5 chrX 28486313 28487189 -138163107 + RLTR13B1 LTR ERVK 1 893 0 4 802 1964 244 53 121 chrX 28487189 28487980 -138162316 - RLTR40 LTR ERVK -65 752 22 4 802 3156 206 44 17 chrX 28489423 28490168 -138160128 + RLTR14-int LTR ERV1 2436 3200 -2117 4 802 692 211 0 0 chrX 28490199 28490322 -138159974 - MMETn-int LTR ERVK -745 6661 6539 4 802 2909 170 13 41 chrX 28490317 28491236 -138159060 - MMETn-int LTR ERVK -1703 3141 2541 4 802 318 62 62 0 chrX 28491236 28491301 -138158995 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 4 802 4849 56 0 7 chrX 28491313 28491922 -138158374 - L1Md_F2 LINE L1 -12 6570 5966 4 802 354 158 0 6 chrX 28491923 28492015 -138158281 - MMETn-int LTR ERVK -2291 2553 2473 4 802 6589 88 1 6 chrX 28492083 28493019 -138157277 + L1Md_F LINE L1 95 1025 -5494 4 802 29449 93 5 27 chrX 28493020 28498206 -138152090 + L1Md_F2 LINE L1 519 5587 -296 4 802 7853 50 2 4 chrX 28498207 28499191 -138151105 + L1Md_F2 LINE L1 5589 6570 -12 4 802 725 226 70 12 chrX 28499217 28499459 -138150837 - RLTR45-int LTR ERVK -2295 4949 4694 4 802 2875 135 51 2 chrX 28499458 28499998 -138150298 - MMETn-int LTR ERVK -3321 4085 3581 4 802 692 152 45 15 chrX 28500000 28500134 -138150162 - ETnERV2-int LTR ERVK -3828 3578 3441 1 802 758 149 39 55 chrX 28500359 28500540 -138149756 - ETnERV2-int LTR ERVK -2654 2190 2040 1 802 543 96 0 0 chrX 28500540 28500613 -138149683 + L1Md_F2 LINE L1 5513 5585 -298 2 802 7576 69 1 10 chrX 28500614 28501605 -138148691 + L1Md_F2 LINE L1 5587 6568 -14 2 802 2597 175 38 30 chrX 28501606 28502260 -138148036 - ETnERV2-int LTR ERVK -4271 3135 1934 1 802 1718 178 65 12 chrX 28502284 28502700 -138147596 - ETnERV2-int LTR ERVK -5321 2085 1648 1 802 573 15 0 0 chrX 28502707 28502773 -138147523 + (GAA)n Simple_repeat Simple_repeat 2 67 0 3 802 268 167 0 0 chrX 28502776 28502830 -138147466 - RMER16-int LTR ERVK -5212 194 141 4 802 320 146 0 18 chrX 28503265 28503321 -138146975 - ETnERV2-int LTR ERVK -6278 1128 1074 1 802 652 255 12 104 chrX 28503311 28503639 -138146657 - ETnERV2-int LTR ERVK -4545 299 2 1 802 1098 170 189 53 chrX 28503641 28504001 -138146295 - RLTR9E LTR ERVK 0 409 1 1 802 8077 189 105 26 chrX 28504001 28505964 -138144332 + RLTR14-int LTR ERV1 3195 5312 -5 5 802 959 151 0 0 chrX 28505989 28506141 -138144155 + RLTR14 LTR ERV1 7 158 -224 5 802 1867 200 43 32 chrX 28506141 28506610 -138143686 - ETnERV2-int LTR ERVK -4437 2969 2496 6 802 1718 178 65 12 chrX 28506634 28507050 -138143246 - ETnERV2-int LTR ERVK -5321 2085 1648 6 802 789 11 0 0 chrX 28507057 28507147 -138143149 + (GAA)n Simple_repeat Simple_repeat 2 91 0 7 802 268 167 0 0 chrX 28507150 28507204 -138143092 - RMER16-int LTR ERVK -5212 194 141 8 802 320 146 0 18 chrX 28507639 28507695 -138142601 - ETnERV2-int LTR ERVK -6278 1128 1074 6 802 650 214 11 44 chrX 28507780 28508014 -138142282 - ETnERV2-int LTR ERVK -3020 294 2 6 802 1108 170 190 48 chrX 28508016 28508374 -138141922 - RLTR9E LTR ERVK 0 409 1 6 802 8059 189 105 25 chrX 28508374 28510336 -138139960 + RLTR14-int LTR ERV1 3195 5312 -5 9 802 1672 190 12 21 chrX 28510361 28510689 -138139607 + RLTR14 LTR ERV1 7 331 -51 9 802 1432 137 0 0 chrX 28510689 28510915 -138139381 - L1_Mus3 LINE L1 -185 5698 5473 1 802 4233 107 24 0 chrX 28510917 28511581 -138138715 + L1_Mus3 LINE L1 5712 6391 -247 1 802 1228 275 16 51 chrX 28511586 28512016 -138138280 + RodERV21-int LTR ERV1 2304 2718 -2273 1 802 403 338 12 34 chrX 28512141 28512466 -138137830 + RodERV21-int LTR ERV1 3586 3903 -3188 1 802 377 20 20 0 chrX 28512778 28512828 -138137468 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1 802 634 228 101 34 chrX 28513493 28513702 -138136594 + LTRIS4 LTR ERV1 285 507 0 1 802 552 255 45 73 chrX 28513704 28514255 -138136041 + MuRRS4-int LTR ERV1 5 498 -4565 1 802 1132 240 60 9 chrX 28514593 28514910 -138135386 + MuRRS4-int LTR ERV1 374 793 -6763 1 802 4018 131 23 9 chrX 28514939 28515625 -138134671 + RMER16-int LTR ERVK 666 1361 -4045 1 802 308 162 57 22 chrX 28515712 28515828 -138134468 + RMER16-int LTR ERVK 1389 1446 -3960 1 802 576 145 92 17 chrX 28515814 28515933 -138134363 + MuRRS4-int LTR ERV1 750 877 -4186 1 802 656 266 16 78 chrX 28515933 28516190 -138134106 - LSU-rRNA_Hsa rRNA rRNA -1371 3664 3424 1 802 1320 272 33 7 chrX 28516339 28516761 -138133535 + MuRRS4-int LTR ERV1 1012 1444 -3619 1 802 1170 170 0 19 chrX 28516780 28517183 -138133113 + MuRRS4-int LTR ERV1 1636 2112 -2951 1 802 399 260 0 0 chrX 28517183 28517279 -138133017 + B3 SINE B2 116 211 -5 1 802 637 323 97 34 chrX 28517512 28517781 -138132515 + B4A SINE B4 4 289 -3 1 802 16329 177 32 49 chrX 28517911 28520598 -138129698 + L1VL2 LINE L1 300 2807 -3076 1 802 938 119 0 0 chrX 28520598 28520732 -138129564 + B1_Mus2 SINE Alu 1 134 -13 2 802 423 52 0 0 chrX 28520742 28520800 -138129496 + (TAA)n Simple_repeat Simple_repeat 2 59 0 2 802 16329 161 18 35 chrX 28520800 28522761 -138127535 + L1VL2 LINE L1 2809 4755 -1128 1 802 5058 141 41 1 chrX 28522762 28523595 -138126701 + Lx LINE L1 5787 6652 -2 2 802 21 0 0 0 chrX 28523595 28523616 -138126680 + AT_rich Low_complexity Low_complexity 1 21 0 2 802 26 88 0 0 chrX 28523659 28523727 -138126569 + AT_rich Low_complexity Low_complexity 1 68 0 2 802 501 17 0 0 chrX 28524894 28524952 -138125344 + (TC)n Simple_repeat Simple_repeat 2 59 0 2 802 513 44 0 0 chrX 28524953 28525021 -138125275 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 802 273 269 95 69 chrX 28525341 28525457 -138124839 + B1F SINE Alu 29 147 -2 2 802 223 342 47 70 chrX 28525452 28525472 -138124824 + ID_B1 SINE B4 70 195 -29 2 802 256 292 101 28 chrX 28525472 28525581 -138124715 + B1F SINE Alu 1 117 -32 2 802 648 276 48 34 chrX 28526364 28526570 -138123726 - B3 SINE B2 -6 210 2 3 802 930 127 14 0 chrX 28526826 28526968 -138123328 - B1_Mus1 SINE Alu -1 147 4 3 802 375 256 160 10 chrX 28526969 28527169 -138123127 - B4 SINE B4 -62 230 1 3 802 225 0 0 0 chrX 28527423 28527448 -138122848 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 3 802 21 36 0 0 chrX 28527812 28527840 -138122456 + AT_rich Low_complexity Low_complexity 1 28 0 3 802 309 331 49 8 chrX 28528088 28528210 -138122086 - B1F SINE Alu -3 146 20 3 802 23709 148 6 2 chrX 28528460 28533628 -138116668 + L1_Mus3 LINE L1 1445 6634 -4 3 802 208 147 0 0 chrX 28534059 28534093 -138116203 + (A)n Simple_repeat Simple_repeat 1 34 0 3 802 456 252 0 0 chrX 28534271 28534394 -138115902 + (TA)n Simple_repeat Simple_repeat 2 124 0 3 802 267 350 20 10 chrX 28534969 28535070 -138115226 + PB1D10 SINE Alu 1 102 -15 3 802 239 352 22 11 chrX 28535974 28536063 -138114233 - B3 SINE B2 -14 202 113 4 802 241 269 0 69 chrX 28536067 28536139 -138114157 - B4A SINE B4 -139 153 87 4 802 452 311 65 13 chrX 28536148 28536301 -138113995 - B3 SINE B2 -53 163 3 4 802 387 0 0 0 chrX 28536385 28536428 -138113868 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 802 6423 108 25 9 chrX 28536548 28538323 -138111973 - L1_Mus1 LINE L1 0 6567 4778 4 802 7024 75 7 10 chrX 28538304 28539482 -138110814 - L1Md_F2 LINE L1 0 6582 5405 4 802 16582 158 11 17 chrX 28539480 28542818 -138107478 - L1_Mus1 LINE L1 -1075 4808 1492 4 802 6192 158 27 16 chrX 28542816 28544154 -138106142 - L1_Mus3 LINE L1 -690 5948 4601 4 802 597 189 9 0 chrX 28544153 28544264 -138106032 - Lx4A LINE L1 -228 6830 6719 4 802 1963 260 67 13 chrX 28545123 28545735 -138104561 - Lx2B LINE L1 -14 6986 6342 4 802 2912 156 65 15 chrX 28545732 28545892 -138104404 + Lx6 LINE L1 4537 4730 -1147 4 802 324 0 0 0 chrX 28545892 28545928 -138104368 + (TAA)n Simple_repeat Simple_repeat 1 36 0 5 802 2912 156 65 15 chrX 28545928 28546378 -138103918 + Lx6 LINE L1 4731 5178 -699 4 802 428 168 9 53 chrX 28546551 28546664 -138103632 - URR1B DNA MER1_type 0 225 118 5 802 393 272 71 47 chrX 28546991 28547161 -138103135 + RLTR1B LTR ERV1 166 339 -173 5 802 8016 33 1 0 chrX 28547328 28548636 -138101660 - L1Md_A LINE L1 -1 6581 5273 5 802 3578 153 20 24 chrX 28548636 28548760 -138101536 + L1_Mus3 LINE L1 5978 6095 -543 5 802 2586 85 0 3 chrX 28548760 28549103 -138101193 + ORR1A1 LTR MaLR 1 342 -4 5 802 3578 153 20 24 chrX 28549103 28549634 -138100662 + L1_Mus3 LINE L1 6096 6630 -8 5 802 987 203 28 7 chrX 28549635 28549918 -138100378 + L1_Mur3 LINE L1 2999 3287 -2593 5 802 1473 271 21 26 chrX 28549925 28550221 -138100075 + Lx6 LINE L1 5607 5903 -1557 4 802 1978 200 17 17 chrX 28550221 28550642 -138099654 + MTC LTR MaLR 1 421 0 5 802 1473 271 21 26 chrX 28550642 28550876 -138099420 + Lx6 LINE L1 5904 6134 -1326 4 802 2674 65 23 6 chrX 28551146 28551500 -138098796 + L1Md_F2 LINE L1 6214 6573 -9 5 802 1252 203 82 47 chrX 28551500 28551925 -138098371 + RLTR21 LTR ERVK 711 1254 -150 5 802 2944 89 7 2 chrX 28552163 28552581 -138097715 - BGLII LTR ERVK 0 421 2 6 802 2691 205 112 9 chrX 28552582 28553506 -138096790 - MYSERV16_I-int LTR ERVK 0 2326 1308 6 802 2063 199 91 82 chrX 28553528 28553863 -138096433 - RMER3D-int LTR ERVK -1164 1678 1386 6 802 3287 46 2 0 chrX 28553863 28554258 -138096038 + MTA_Mm LTR MaLR 1 396 0 6 802 2063 199 91 82 chrX 28554258 28554579 -138095717 - RMER3D-int LTR ERVK -1457 1385 1016 6 802 495 122 82 35 chrX 28554625 28554795 -138095501 + CT-rich Low_complexity Low_complexity 3 180 0 6 802 546 227 73 38 chrX 28554834 28555142 -138095154 - RMER3D-int LTR ERVK -2036 806 354 6 802 629 202 25 40 chrX 28555208 28555409 -138094887 - RMER3D-int LTR ERVK -1993 849 652 6 802 468 128 0 0 chrX 28555424 28555512 -138094784 - RMER3D-int LTR ERVK -2278 564 489 6 802 1962 268 47 19 chrX 28555776 28556354 -138093942 - Lx7 LINE L1 -1042 6654 6061 6 802 669 255 65 44 chrX 28556390 28556665 -138093631 - Lx7 LINE L1 -1559 6137 5857 6 802 646 288 51 6 chrX 28556961 28557139 -138093157 + B3A SINE B2 1 186 -12 6 802 186 43 0 0 chrX 28557231 28557254 -138093042 + (GGAA)n Simple_repeat Simple_repeat 3 25 0 6 802 861 284 0 0 chrX 28557340 28557544 -138092752 - B3 SINE B2 -12 204 1 6 802 986 271 86 0 chrX 28557969 28558260 -138092036 - MER2 DNA MER2_type -29 316 1 7 802 752 187 78 15 chrX 28558424 28558630 -138091666 + L1_Mm LINE L1 5235 5453 -430 7 802 17324 200 14 70 chrX 28558662 28565562 -138084734 + L1_Mus1 LINE L1 217 6567 0 7 802 4282 180 25 4 chrX 28565574 28566378 -138083918 + Lx2 LINE L1 5813 6633 -364 7 802 1224 173 9 0 chrX 28566379 28566604 -138083692 + Lx2 LINE L1 6765 6991 -6 7 802 361 213 0 13 chrX 28566896 28566972 -138083324 - ID_B1 SINE B4 -2 222 148 7 802 621 0 0 0 chrX 28566975 28567044 -138083252 + (TA)n Simple_repeat Simple_repeat 2 70 0 7 802 289 262 56 46 chrX 28567044 28567072 -138083224 - B1F SINE Alu -85 64 39 7 802 6409 186 29 6 chrX 28567072 28568615 -138081681 - Lx3C LINE L1 -40 6936 5353 7 802 7547 220 79 31 chrX 28568622 28568716 -138081580 + Lx4A LINE L1 3729 3819 -2067 7 802 3335 35 2 0 chrX 28568716 28569111 -138081185 + MTA_Mm LTR MaLR 1 396 0 7 802 9104 34 3 1 chrX 28569111 28570207 -138080089 + MTA_Mm-int LTR MaLR 1 1098 0 7 802 3405 23 2 2 chrX 28570207 28570603 -138079693 + MTA_Mm LTR MaLR 1 396 0 7 802 8553 188 34 24 chrX 28570603 28573443 -138076853 + Lx4A LINE L1 3820 6779 -279 7 803 327 391 35 30 chrX 28573809 28574325 -138075971 - RMER1C Other Other -477 865 362 8 803 475 415 12 0 chrX 28574420 28574668 -138075628 - RMER1C Other Other -671 671 421 8 803 419 398 26 19 chrX 28574944 28575208 -138075088 - RMER1C Other Other -613 729 464 8 803 342 431 11 27 chrX 28575303 28575668 -138074628 - RMER1C Other Other -475 867 509 8 803 358 417 34 45 chrX 28576140 28576683 -138073613 - RMER1C Other Other -579 763 378 8 803 338 396 42 5 chrX 28577292 28577485 -138072811 - RMER1C Other Other -681 661 462 8 803 398 434 29 24 chrX 28577615 28578265 -138072031 - RMER1C Other Other -509 833 379 8 803 207 0 0 0 chrX 28578514 28578537 -138071759 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 803 315 0 0 0 chrX 28578537 28578571 -138071725 + (TA)n Simple_repeat Simple_repeat 1 35 0 8 803 694 379 47 26 chrX 28578694 28579512 -138070784 - RMER1C Other Other -468 874 129 8 803 315 428 28 25 chrX 28580024 28580640 -138069656 - RMER1C Other Other -471 871 487 9 803 227 441 12 32 chrX 28581007 28581351 -138068945 - RMER1C Other Other -625 717 381 9 803 3587 163 9 5 chrX 28582076 28582724 -138067572 + L1Md_A LINE L1 444 1094 -5633 9 803 2625 99 2 2 chrX 28582722 28583116 -138067180 + L1Md_A LINE L1 1980 2373 -3513 9 803 20275 77 0 2 chrX 28583127 28585870 -138064426 + L1Md_A LINE L1 2853 5589 -297 9 803 7794 59 1 2 chrX 28585870 28586855 -138063441 + L1Md_F2 LINE L1 5587 6570 -12 9 803 20275 98 14143 0 chrX 28586855 28587170 -138063126 + L1Md_A LINE L1 5590 5597 -289 9 803 4058 63 0 0 chrX 28587136 28587693 -138062603 + L1_Mm LINE L1 1203 1759 -4124 9 803 846 113 35 21 chrX 28587697 28587842 -138062454 - L1_Mus1 LINE L1 0 6567 6421 9 803 226 303 81 66 chrX 28588140 28588398 -138061898 - RMER17C LTR ERVK -64 346 85 9 803 5733 132 7 30 chrX 28588868 28589836 -138060460 + Lx3A LINE L1 6028 6973 -8 9 803 211 333 62 37 chrX 28591155 28591317 -138058979 + L2 LINE L2 1494 1659 -1760 9 803 518 358 37 33 chrX 28591790 28592004 -138058292 - B4A SINE B4 -2 290 76 9 803 228 86 0 0 chrX 28592040 28592075 -138058221 + (TGG)n Simple_repeat Simple_repeat 1 35 0 1 803 363 329 116 34 chrX 28592171 28592404 -138057892 + L2 LINE L2 2049 2300 -1119 9 803 4585 133 12 19 chrX 28592409 28593206 -138057090 + YREP_Mm Unknown Unknown 986 1777 -35 1 803 23 54 0 0 chrX 28593460 28593497 -138056799 + AT_rich Low_complexity Low_complexity 1 37 0 1 803 455 289 0 0 chrX 28594047 28594151 -138056145 + B3 SINE B2 98 201 -15 1 803 397 252 75 8 chrX 28594211 28594331 -138055965 + B1F SINE Alu 21 148 -1 1 803 955 236 19 0 chrX 28594477 28594689 -138055607 + B3 SINE B2 1 216 0 1 803 637 316 95 37 chrX 28594917 28595190 -138055106 + B4A SINE B4 4 292 0 1 803 17086 177 34 52 chrX 28595316 28598022 -138052274 + L1VL2 LINE L1 300 2807 -3076 1 803 990 104 0 0 chrX 28598022 28598156 -138052140 + B1_Mus2 SINE Alu 1 134 -13 1 803 432 104 0 0 chrX 28598166 28598233 -138052063 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 803 17086 162 21 41 chrX 28598233 28600185 -138050111 + L1VL2 LINE L1 2811 4755 -1128 1 803 5294 140 19 1 chrX 28600186 28601037 -138049259 + Lx LINE L1 5787 6652 -2 1 803 21 89 0 0 chrX 28601101 28601157 -138049139 + AT_rich Low_complexity Low_complexity 1 56 0 1 803 594 0 0 0 chrX 28602516 28602582 -138047714 + (TC)n Simple_repeat Simple_repeat 2 67 0 1 803 237 33 0 0 chrX 28602583 28602613 -138047683 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 803 269 269 95 69 chrX 28602932 28603048 -138047248 + B1F SINE Alu 29 147 -2 1 803 225 333 47 70 chrX 28603043 28603063 -138047233 + ID_B1 SINE B4 70 195 -29 1 803 257 283 101 28 chrX 28603063 28603172 -138047124 + B1F SINE Alu 1 117 -32 1 803 788 289 39 24 chrX 28603955 28604161 -138046135 - B3 SINE B2 -6 210 2 1 803 928 132 0 14 chrX 28604411 28604557 -138045739 - B1_Mus1 SINE Alu -1 147 4 1 803 312 224 26 26 chrX 28604558 28604636 -138045660 - B4A SINE B4 -62 230 153 1 803 333 312 0 0 chrX 28604665 28604758 -138045538 - B4 SINE B4 -199 93 1 1 803 183 42 0 0 chrX 28605014 28605038 -138045258 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 1 803 21 36 0 0 chrX 28605399 28605427 -138044869 + AT_rich Low_complexity Low_complexity 1 28 0 1 803 321 322 49 8 chrX 28605675 28605797 -138044499 - B1F SINE Alu -3 146 20 1 803 25245 149 6 2 chrX 28606048 28611219 -138039077 + L1_Mus3 LINE L1 1445 6634 -4 1 803 27 29 0 0 chrX 28611644 28611678 -138038618 + AT_rich Low_complexity Low_complexity 1 34 0 1 803 419 153 24 0 chrX 28611844 28611918 -138038378 + (TATATG)n Simple_repeat Simple_repeat 6 81 0 1 803 204 40 0 0 chrX 28611918 28611943 -138038353 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 803 419 153 24 0 chrX 28611943 28611953 -138038343 + (TATATG)n Simple_repeat Simple_repeat 2 11 0 1 803 268 279 29 0 chrX 28612525 28612593 -138037703 + PB1D10 SINE Alu 1 70 -47 1 803 262 326 34 0 chrX 28612593 28612622 -138037674 + ID_B1 SINE B4 83 190 -102 1 803 266 341 22 11 chrX 28613533 28613622 -138036674 - B3 SINE B2 -14 202 113 1 803 222 284 0 69 chrX 28613626 28613698 -138036598 - B4A SINE B4 -139 153 87 1 803 443 293 72 20 chrX 28613707 28613860 -138036436 - B3 SINE B2 -53 163 3 1 803 249 57 0 0 chrX 28613944 28613979 -138036317 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 803 6581 106 26 3 chrX 28614099 28615868 -138034428 - L1_Mus1 LINE L1 0 6567 4771 1 803 7083 71 5 12 chrX 28615845 28617026 -138033270 - L1Md_F2 LINE L1 -1 6581 5405 1 803 16656 157 11 16 chrX 28617024 28620350 -138029946 - L1_Mus1 LINE L1 -1075 4808 1501 1 803 6265 159 28 2 chrX 28620357 28621534 -138028762 - L1_Mus3 LINE L1 -690 5948 4735 1 803 216 86 0 0 chrX 28621534 28621569 -138028727 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 803 6265 174 30 2 chrX 28621569 28621704 -138028592 - L1_Mus3 LINE L1 -1149 4734 4601 1 803 558 207 9 0 chrX 28621703 28621814 -138028482 - Lx4A LINE L1 -228 6830 6719 1 803 2091 253 68 3 chrX 28622676 28623282 -138027014 - Lx2B LINE L1 -14 6986 6342 1 803 2985 164 40 16 chrX 28623279 28623906 -138026390 + L1_Mur2 LINE L1 4537 5178 -699 1 803 450 159 22 11 chrX 28624079 28624168 -138026128 - URR1B DNA MER1_type 0 225 136 1 803 23 33 0 0 chrX 28624273 28624303 -138025993 + AT_rich Low_complexity Low_complexity 1 30 0 1 803 2829 239 22 11 chrX 28624443 28625433 -138024863 - Lx6 LINE L1 -1352 6108 5105 1 803 956 233 40 18 chrX 28625438 28625766 -138024530 - Lx6 LINE L1 -2035 3845 3511 1 803 627 233 67 34 chrX 28625766 28625928 -138024368 - Lx6 LINE L1 -3397 2480 2324 1 803 513 0 0 0 chrX 28625928 28625985 -138024311 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 803 627 233 67 34 chrX 28625985 28626031 -138024265 - Lx6 LINE L1 -3554 2323 2266 1 803 621 311 60 28 chrX 28626037 28626255 -138024041 - ORR1D2 LTR MaLR -145 225 1 1 803 295 370 0 0 chrX 28626262 28626397 -138023899 + Lx7 LINE L1 6949 7083 -613 1 803 835 280 87 23 chrX 28626595 28626942 -138023354 + ORR1D2 LTR MaLR 1 369 -1 1 803 480 248 8 15 chrX 28627097 28627228 -138023068 + Lx8 LINE L1 6640 6769 -704 1 803 301 362 0 0 chrX 28628079 28628195 -138022101 + RMER1C Other Other 537 652 -690 1 803 381 154 0 0 chrX 28628947 28629038 -138021258 + A-rich Low_complexity Low_complexity 1 91 0 1 803 228 316 100 25 chrX 28629155 28629275 -138021021 + RMER1C Other Other 488 616 -726 1 803 10417 69 4 0 chrX 28629824 28630547 -138019749 - L1Md_A LINE L1 -3185 2698 1976 1 803 201 39 0 0 chrX 28630547 28630573 -138019723 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 803 10417 128 10 22 chrX 28630573 28632337 -138017959 - L1Md_A LINE L1 -3908 1975 233 1 803 248 424 26 20 chrX 28634093 28634440 -138015856 + RMER1C Other Other 487 835 -507 1 803 467 384 41 16 chrX 28634944 28635390 -138014906 + RMER1C Other Other 375 874 -468 1 803 603 0 0 0 chrX 28635857 28635924 -138014372 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 803 229 419 41 32 chrX 28636177 28636520 -138013776 + RMER1C Other Other 413 758 -584 1 803 237 398 47 10 chrX 28636949 28637142 -138013154 + RMER1C Other Other 462 661 -681 1 803 225 406 19 13 chrX 28637960 28638117 -138012179 + RMER1C Other Other 494 651 -691 1 803 239 451 4 8 chrX 28638775 28639014 -138011282 + RMER1C Other Other 546 783 -559 1 803 263 401 26 22 chrX 28639236 28639463 -138010833 + RMER1C Other Other 464 691 -651 1 803 21 0 0 0 chrX 28639604 28639625 -138010671 + AT_rich Low_complexity Low_complexity 1 21 0 1 803 273 426 16 4 chrX 28639781 28640024 -138010272 + RMER1C Other Other 426 671 -671 1 803 280 371 25 22 chrX 28640185 28640636 -138009660 + RMER1C Other Other 464 865 -477 1 803 10066 182 29 8 chrX 28641002 28643986 -138006310 - Lx4A LINE L1 -279 6779 3725 1 803 6035 185 36 6 chrX 28643998 28645536 -138004760 + Lx3C LINE L1 5353 6936 -40 1 803 223 314 36 62 chrX 28645536 28645566 -138004730 + B1_Mur1 SINE Alu 39 66 -83 1 803 258 32 0 0 chrX 28645566 28645597 -138004699 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1 803 360 213 0 13 chrX 28645602 28645678 -138004618 + ID_B1 SINE B4 148 222 -2 1 803 1258 162 5 0 chrX 28645970 28646186 -138004110 - Lx2 LINE L1 -6 6991 6775 1 803 4190 169 21 5 chrX 28646184 28646995 -138003301 - Lx2 LINE L1 -352 6645 5822 1 803 4499 101 5 5 chrX 28647007 28647651 -138002645 - L1_Mus1 LINE L1 0 6567 5924 1 803 35156 30 3 7 chrX 28647651 28653051 -137997245 + L1Md_T LINE L1 215 5587 -296 1 803 8249 43 1 0 chrX 28653052 28654045 -137996251 + L1Md_T LINE L1 5589 6582 0 1 803 11815 123 25 0 chrX 28654058 28656131 -137994165 - L1_Mus1 LINE L1 -630 5937 3825 1 803 14622 146 5 33 chrX 28656327 28659534 -137990762 - L1_Mus1 LINE L1 -2054 3829 725 1 803 519 224 37 0 chrX 28659543 28659677 -137990619 - L1_Mus1 LINE L1 -5814 802 664 1 803 514 283 18 118 chrX 28659730 28660190 -137990106 - L1VL1 LINE L1 -6030 392 45 1 803 880 162 63 10 chrX 28660224 28660430 -137989866 - L1_Mm LINE L1 -432 5451 5235 1 803 1019 274 84 0 chrX 28660592 28660888 -137989408 + MER2 DNA MER2_type 1 321 -24 1 803 796 293 10 0 chrX 28661308 28661513 -137988783 + B3 SINE B2 1 207 -9 1 803 522 31 0 0 chrX 28661595 28661659 -137988637 + (TTCC)n Simple_repeat Simple_repeat 3 66 0 1 803 648 271 51 6 chrX 28661749 28661927 -137988369 - B3A SINE B2 -12 186 1 1 803 400 93 0 26 chrX 28662172 28662249 -137988047 + (TA)n Simple_repeat Simple_repeat 2 76 0 1 803 580 259 55 26 chrX 28662260 28662533 -137987763 + Lx7 LINE L1 5857 6137 -1559 1 803 1670 280 47 19 chrX 28662569 28663147 -137987149 + Lx7 LINE L1 6061 6654 -1042 1 803 434 159 0 0 chrX 28663411 28663499 -137986797 + RMER3D-int LTR ERVK 489 564 -2278 1 803 577 218 80 25 chrX 28663514 28663760 -137986536 + RMER3D-int LTR ERVK 652 849 -1993 1 803 511 222 32 37 chrX 28663801 28664136 -137986160 + RMER3D-int LTR ERVK 354 804 -2038 1 803 469 116 80 27 chrX 28664138 28664288 -137986008 + GA-rich Low_complexity Low_complexity 3 160 0 1 803 1489 179 170 36 chrX 28664333 28664656 -137985640 + RMER3D-int LTR ERVK 1014 1383 -1459 1 803 3253 51 2 0 chrX 28664656 28665051 -137985245 - MTA_Mm LTR MaLR 0 396 1 1 803 1489 191 21 46 chrX 28665051 28665208 -137985088 + RMER3D-int LTR ERVK 1384 1533 -1309 1 803 482 242 35 47 chrX 28665236 28665405 -137984891 + RMER3D-int LTR ERVK 1528 1694 -1148 1 803 2672 202 111 8 chrX 28665411 28666332 -137983964 + MYSERV16_I-int LTR ERVK 1311 2326 0 1 803 2851 94 17 2 chrX 28666332 28666747 -137983549 + BGLII LTR ERVK 1 421 0 1 803 1167 217 67 45 chrX 28666986 28667418 -137982878 - RLTR21 LTR ERVK -150 1254 706 1 803 11874 94 4 2 chrX 28667418 28669757 -137980539 - L1Md_F2 LINE L1 -13 6569 4226 1 803 13580 117 5 25 chrX 28669741 28672539 -137977757 - L1Md_F2 LINE L1 -2718 3165 446 1 803 791 154 11 56 chrX 28672542 28672721 -137977575 - RLTR21 LTR ERVK -855 717 547 1 803 1453 229 18 39 chrX 28672763 28673094 -137977202 - RLTR21 LTR ERVK -1248 324 1 1 803 1765 257 20 28 chrX 28673593 28673827 -137976469 - Lx6 LINE L1 -1326 6134 5904 1 803 2238 196 17 14 chrX 28673827 28674247 -137976049 - MTC LTR MaLR 0 421 1 1 803 1765 257 20 28 chrX 28674247 28674521 -137975775 - Lx6 LINE L1 -1557 5903 5630 1 803 1171 192 28 11 chrX 28674550 28674834 -137975462 - L1_Mur3 LINE L1 -2593 3287 2999 1 803 3687 156 37 25 chrX 28674835 28675366 -137974930 - L1_Mus3 LINE L1 -8 6630 6101 1 803 2796 82 0 3 chrX 28675366 28675709 -137974587 - ORR1A1 LTR MaLR -4 342 1 1 803 3687 156 37 25 chrX 28675709 28675822 -137974474 - L1_Mus3 LINE L1 -538 6100 5978 1 803 2291 66 36 0 chrX 28675822 28676125 -137974171 + L1Md_F2 LINE L1 5273 5586 -297 1 803 7769 75 5 14 chrX 28676126 28677128 -137973168 + L1Md_F2 LINE L1 5588 6580 -2 1 803 1324 311 35 39 chrX 28677140 28677681 -137972615 - RodERV21-int LTR ERV1 -3339 1652 1114 1 803 339 269 58 65 chrX 28677820 28677959 -137972337 - RodERV21-int LTR ERV1 -3961 1030 893 1 803 226 297 13 13 chrX 28678998 28679073 -137971223 + GA-rich Low_complexity Low_complexity 3 77 0 1 803 434 245 27 40 chrX 28679224 28679373 -137970923 - L1_Rod LINE L1 -313 5534 5388 1 803 2280 194 70 34 chrX 28679384 28679938 -137970358 + RLTR31A_Mm LTR ERVK 11 584 0 1 803 23 0 0 0 chrX 28680036 28680059 -137970237 + AT_rich Low_complexity Low_complexity 1 23 0 1 803 841 145 13 46 chrX 28680193 28680345 -137969951 - B1_Mus1 SINE Alu 0 148 2 2 803 3600 320 46 51 chrX 28680789 28681080 -137969216 - RodERV21-int LTR ERV1 -198 4793 4501 2 803 2621 126 35 54 chrX 28681080 28681508 -137968788 - RLTR9B2 LTR ERVK 0 420 1 2 803 3600 320 46 51 chrX 28681508 28683319 -137966977 - RodERV21-int LTR ERV1 -491 4500 2702 2 803 1121 269 6 13 chrX 28683687 28683999 -137966297 - MuRRS4-int LTR ERV1 -118 4945 4636 2 803 844 191 0 6 chrX 28683990 28684148 -137966148 - MuRRS4-int LTR ERV1 -119 4944 4788 2 803 1561 213 81 88 chrX 28684271 28684827 -137965469 - MuRRS4-int LTR ERV1 -2872 2191 1640 2 803 1589 261 33 7 chrX 28684804 28685228 -137965068 - MuRRS4-int LTR ERV1 -3617 1446 1012 2 803 750 268 8 66 chrX 28685375 28685631 -137964665 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 2 803 580 139 111 17 chrX 28685631 28685748 -137964548 - MuRRS4-int LTR ERV1 -4186 877 750 2 803 416 191 10 69 chrX 28685732 28685833 -137964463 - RMER16-int LTR ERVK -3958 1448 1354 2 803 4326 136 28 4 chrX 28685936 28686617 -137963679 - RMER16-int LTR ERVK -4045 1361 665 2 803 1202 244 65 22 chrX 28686637 28686959 -137963337 - MuRRS4-int LTR ERV1 -4388 675 340 2 803 622 249 56 83 chrX 28687293 28687843 -137962453 - MuRRS4-int LTR ERV1 -4565 498 5 2 803 638 270 76 47 chrX 28687845 28688121 -137962175 - LTRIS4 LTR ERV1 0 507 224 2 803 423 87 0 0 chrX 28688722 28688791 -137961505 + (A)n Simple_repeat Simple_repeat 1 69 0 2 803 426 332 52 63 chrX 28688943 28689419 -137960877 - RodERV21-int LTR ERV1 -3035 4056 3586 2 803 1371 283 21 56 chrX 28689543 28689973 -137960323 - RodERV21-int LTR ERV1 -2273 2718 2304 2 803 4681 101 23 0 chrX 28689978 28690643 -137959653 - L1_Mus3 LINE L1 -247 6391 5712 2 803 1514 149 0 0 chrX 28690645 28690873 -137959423 + L1_Mus3 LINE L1 5473 5700 -183 2 803 1733 179 9 21 chrX 28690874 28691200 -137959096 - RLTR14 LTR ERV1 -54 328 7 2 803 545 172 0 11 chrX 28691225 28691319 -137958977 - RLTR14-int LTR ERV1 -5 5312 5220 2 803 1639 178 118 6 chrX 28691342 28691699 -137958597 - RLTR14-int LTR ERV1 -205 5112 4716 2 803 1923 112 27 66 chrX 28691699 28692034 -137958262 - RLTRETN_Mm LTR ERVK 0 322 1 2 803 10474 155 56 54 chrX 28692034 28695437 -137954859 - MMETn-int LTR ERVK 0 4844 1 2 803 232 273 32 54 chrX 28695451 28695544 -137954752 - RLTRETN_Mm LTR ERVK -15 394 304 2 803 31561 81 4 17 chrX 28695544 28700457 -137949839 - L1Md_F LINE L1 -522 5361 519 2 803 5520 90 3 1 chrX 28700458 28701190 -137949106 - L1Md_F LINE L1 -5494 1025 293 2 803 376 157 0 6 chrX 28701248 28701333 -137948963 + MMETn-int LTR ERVK 2473 2546 -2298 2 803 4693 69 0 7 chrX 28701333 28701934 -137948362 + L1Md_F2 LINE L1 5954 6554 -28 2 803 3978 34 2 0 chrX 28701934 28702375 -137947921 + L1Md_T LINE L1 6140 6581 -1 2 803 250 24 47 23 chrX 28702400 28702443 -137947853 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 2 803 3044 188 15 40 chrX 28702444 28703359 -137946937 + MMETn-int LTR ERVK 2541 3719 -1125 2 803 779 195 0 0 chrX 28703354 28703477 -137946819 + MMETn-int LTR ERVK 6539 6661 -745 2 803 3520 201 50 18 chrX 28703508 28704249 -137946047 - RLTR14-int LTR ERV1 -2117 3200 2436 2 804 1766 230 59 35 chrX 28705704 28706226 -137944070 + RLTR40 LTR ERVK 22 556 -261 2 804 287 182 13 0 chrX 28706228 28706305 -137943991 + GA-rich Low_complexity Low_complexity 2 79 0 2 804 544 297 52 44 chrX 28706305 28706492 -137943804 + RLTR40 LTR ERVK 566 752 -65 2 804 6581 90 32 3 chrX 28706492 28706908 -137943388 - RLTR13B1 LTR ERVK 0 893 476 2 804 327 25 0 0 chrX 28706908 28706948 -137943348 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 804 6581 90 32 3 chrX 28706948 28707399 -137942897 - RLTR13B1 LTR ERVK -418 475 3 2 804 544 297 52 44 chrX 28707399 28707461 -137942835 + RLTR40 LTR ERVK 753 817 0 2 804 477 0 0 0 chrX 28707652 28707705 -137942591 + (TAA)n Simple_repeat Simple_repeat 2 54 0 2 804 757 232 57 10 chrX 28709236 28709428 -137940868 - Lx9 LINE L1 -243 7401 7201 2 804 354 242 0 0 chrX 28709426 28709517 -137940779 + Lx9 LINE L1 7552 7642 -2 2 804 513 268 14 7 chrX 28709521 28709664 -137940632 + Lx5 LINE L1 6825 6968 -82 2 804 372 43 0 0 chrX 28709679 28709725 -137940571 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 2 804 672 229 34 14 chrX 28709737 28709883 -137940413 + B1_Mur2 SINE Alu 1 149 0 2 804 2009 173 31 0 chrX 28709892 28710251 -137940045 + L1_Mus3 LINE L1 6261 6630 -8 2 804 29 47 0 0 chrX 28710264 28710307 -137939989 + AT_rich Low_complexity Low_complexity 1 43 0 2 804 235 200 0 68 chrX 28710373 28710432 -137939864 + A-rich Low_complexity Low_complexity 4 58 0 2 804 727 275 19 14 chrX 28710440 28710654 -137939642 + Lx4B LINE L1 6809 7023 -35 2 804 3030 173 32 2 chrX 28710690 28711282 -137939014 - L1_Mur2 LINE L1 -1176 4701 4092 2 804 9796 144 40 22 chrX 28711284 28712650 -137937646 - RLTR22_Mur LTR ERVK -2 1846 461 2 804 496 73 0 24 chrX 28712650 28712734 -137937562 + (TAG)n Simple_repeat Simple_repeat 3 84 0 2 804 9796 144 40 22 chrX 28712734 28713181 -137937115 - RLTR22_Mur LTR ERVK -1388 460 3 2 804 842 178 202 0 chrX 28713181 28713423 -137936873 - L1_Mur2 LINE L1 -1782 4095 3805 2 804 1489 133 25 4 chrX 28713465 28713706 -137936590 + L1_Mus4 LINE L1 6391 6636 0 2 804 203 54 26 51 chrX 28713711 28713750 -137936546 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 2 804 225 0 0 0 chrX 28714195 28714220 -137936076 + (CAAAG)n Simple_repeat Simple_repeat 3 27 0 2 804 24 0 0 0 chrX 28715613 28715637 -137934659 + AT_rich Low_complexity Low_complexity 1 24 0 2 804 356 252 45 22 chrX 28715922 28716056 -137934240 + L1_Mur2 LINE L1 4334 4470 -1407 2 804 956 308 47 31 chrX 28716061 28716496 -137933800 + Lx6 LINE L1 6506 7296 -164 2 804 1682 186 20 90 chrX 28716471 28716927 -137933369 - L1_Mur2 LINE L1 -2134 3743 3320 2 804 1283 63 0 0 chrX 28716928 28717086 -137933210 - L1_Mus1 LINE L1 0 6567 6410 2 804 2569 96 0 0 chrX 28717086 28717440 -137932856 - L1_Mus1 LINE L1 -431 6136 5783 2 804 262 314 169 14 chrX 28717452 28717594 -137932702 - LTR82A LTR ERVL -172 700 537 2 804 286 314 0 0 chrX 28717744 28717814 -137932482 - LTR82A LTR ERVL -680 192 123 2 804 252 0 0 0 chrX 28717878 28717906 -137932390 + (T)n Simple_repeat Simple_repeat 1 28 0 2 804 215 259 158 12 chrX 28717906 28717988 -137932308 + L2a LINE L2 3333 3426 0 2 804 21 0 0 0 chrX 28718030 28718051 -137932245 + AT_rich Low_complexity Low_complexity 1 21 0 2 804 21854 138 6 4 chrX 28718521 28721178 -137929118 - L1_Mm LINE L1 -86 5797 3134 2 804 207 0 0 0 chrX 28721178 28721201 -137929095 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 804 21854 138 6 4 chrX 28721201 28722039 -137928257 - L1_Mm LINE L1 -2750 3133 2295 2 804 1392 187 52 0 chrX 28722040 28722291 -137928005 + L1VL1 LINE L1 3 266 -6156 2 804 4981 131 29 15 chrX 28722291 28723990 -137926306 + L1Md_F LINE L1 277 1998 -3885 2 804 33078 50 4 7 chrX 28723989 28729593 -137920703 + L1Md_F2 LINE L1 2 5586 -297 2 804 7304 73 21 0 chrX 28729593 28730557 -137919739 + L1Md_F2 LINE L1 5587 6570 -12 2 804 1190 204 86 48 chrX 28730557 28730985 -137919311 + RLTR21 LTR ERVK 707 1254 -150 2 804 2387 103 6 3 chrX 28731223 28731582 -137918714 - BGLII LTR ERVK 0 421 62 2 804 2410 215 109 6 chrX 28731589 28732411 -137917885 - MYSERV16_I-int LTR ERVK -112 2214 1308 2 804 2066 195 88 79 chrX 28732434 28732769 -137917527 - RMER3D-int LTR ERVK -1164 1678 1384 2 804 3209 56 2 0 chrX 28732769 28733164 -137917132 + MTA_Mm LTR MaLR 1 396 0 2 804 2066 195 88 79 chrX 28733164 28733485 -137916811 - RMER3D-int LTR ERVK -1459 1383 1016 2 804 449 197 0 68 chrX 28733533 28733724 -137916572 + CT-rich Low_complexity Low_complexity 2 179 0 2 804 410 141 25 13 chrX 28733742 28733821 -137916475 - RMER3D-int LTR ERVK -2274 568 489 2 804 543 186 16 35 chrX 28733893 28734040 -137916256 - RMER3D-int LTR ERVK -2069 773 650 2 804 562 223 25 40 chrX 28734130 28734331 -137915965 - RMER3D-int LTR ERVK -1993 849 652 2 804 426 133 0 0 chrX 28734349 28734434 -137915862 - RMER3D-int LTR ERVK -2278 564 489 2 804 1757 267 42 26 chrX 28734698 28735271 -137915025 - Lx7 LINE L1 -1042 6654 6073 2 804 598 266 51 29 chrX 28735309 28735584 -137914712 - Lx7 LINE L1 -1559 6137 5857 2 804 470 17 0 17 chrX 28735595 28735655 -137914641 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 804 540 305 51 6 chrX 28735924 28736102 -137914194 + B3A SINE B2 1 186 -12 2 804 276 100 0 0 chrX 28736188 28736228 -137914068 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 2 804 756 302 10 0 chrX 28736310 28736515 -137913781 - B3 SINE B2 -9 207 1 2 804 1024 274 82 0 chrX 28736934 28737226 -137913070 - MER2 DNA MER2_type -24 321 6 2 804 848 161 62 19 chrX 28737391 28737600 -137912696 + L1_Mm LINE L1 5234 5451 -432 2 804 532 281 19 116 chrX 28737646 28738094 -137912202 + L1_Mus1 LINE L1 217 608 -6030 2 804 441 242 19 39 chrX 28738154 28738309 -137911987 + L1Md_F LINE L1 578 729 -5790 2 804 2050 208 11 0 chrX 28738290 28738766 -137911530 + L1Md_F LINE L1 628 1108 -5411 2 804 15697 196 16 59 chrX 28738763 28744559 -137905737 + L1_Mus1 LINE L1 1071 6567 0 2 804 4343 167 17 5 chrX 28744572 28745385 -137904911 + Lx2 LINE L1 5823 6645 -352 2 804 1186 165 18 0 chrX 28745380 28745598 -137904698 + Lx2 LINE L1 6770 6991 -6 2 804 405 226 39 19 chrX 28745890 28745994 -137904302 - ID_B1 SINE B4 -2 222 117 2 804 2960 201 31 15 chrX 28745994 28746662 -137903634 - Lx3C LINE L1 -57 6919 6241 2 804 9640 11 0 0 chrX 28746679 28748535 -137901761 - L1Md_T LINE L1 0 6582 4727 2 804 10086 180 30 14 chrX 28748544 28751544 -137898752 + Lx4A LINE L1 3725 6779 -279 2 804 288 392 32 28 chrX 28751910 28752414 -137897882 - RMER1C Other Other -477 865 374 2 804 358 423 12 0 chrX 28752522 28752770 -137897526 - RMER1C Other Other -671 671 421 2 804 300 409 26 19 chrX 28753046 28753310 -137896986 - RMER1C Other Other -613 729 464 2 804 284 422 12 26 chrX 28753426 28753769 -137896527 - RMER1C Other Other -496 846 509 2 804 265 406 17 11 chrX 28754431 28754608 -137895688 - RMER1C Other Other -691 651 474 2 804 275 404 26 1 chrX 28755417 28755597 -137894699 - RMER1C Other Other -618 724 419 2 804 33803 23 1 0 chrX 28755679 28760539 -137889757 - L1Md_A LINE L1 -4 6578 1717 2 804 249 430 14 20 chrX 28760651 28761000 -137889296 - RMER1C Other Other -588 754 408 2 804 528 16 0 0 chrX 28761501 28761562 -137888734 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 804 315 0 0 0 chrX 28761562 28761596 -137888700 + (TA)n Simple_repeat Simple_repeat 1 35 0 2 804 515 379 40 17 chrX 28762167 28762513 -137887783 - RMER1C Other Other -468 874 521 2 804 256 423 25 24 chrX 28763017 28763667 -137886629 - RMER1C Other Other -457 885 487 2 804 3364 170 8 3 chrX 28765103 28765751 -137884545 + L1Md_F2 LINE L1 441 1091 -5633 2 804 2551 99 0 2 chrX 28765749 28766144 -137884152 + L1Md_F2 LINE L1 1977 2370 -3513 2 804 19650 72 0 0 chrX 28766155 28768892 -137881404 + L1Md_F2 LINE L1 2850 5585 -298 2 804 7660 62 1 5 chrX 28768893 28769881 -137880415 + L1Md_F2 LINE L1 5587 6570 -12 2 804 3684 81 1 0 chrX 28769882 28770719 -137879577 + L1Md_Gf LINE L1 828 1762 -4124 2 804 806 120 34 27 chrX 28770723 28770869 -137879427 - L1_Mus1 LINE L1 0 6567 6421 2 804 283 303 56 70 chrX 28771148 28771432 -137878864 - RMER17C LTR ERVK -48 362 83 2 804 5819 129 8 28 chrX 28771896 28772862 -137877434 + Lx3A LINE L1 6028 6974 -7 2 804 193 333 62 37 chrX 28774177 28774339 -137875957 + L2 LINE L2 1494 1659 -1760 2 804 551 322 46 18 chrX 28774812 28775028 -137875268 - B4A SINE B4 -2 290 75 2 804 228 86 0 0 chrX 28775064 28775099 -137875197 + (TGG)n Simple_repeat Simple_repeat 1 35 0 2 804 294 342 116 34 chrX 28775195 28775428 -137874868 + L2 LINE L2 2049 2300 -1119 2 804 4483 138 12 19 chrX 28775433 28776230 -137874066 + YREP_Mm Unknown Unknown 986 1777 -35 2 804 456 289 0 0 chrX 28777071 28777175 -137873121 + B3 SINE B2 98 201 -15 2 804 400 256 59 8 chrX 28777235 28777353 -137872943 + B1F SINE Alu 21 144 -5 2 804 919 241 19 0 chrX 28777501 28777713 -137872583 + B3 SINE B2 1 216 0 2 804 662 311 94 34 chrX 28777949 28778215 -137872081 + B4A SINE B4 11 292 0 2 804 15191 176 31 64 chrX 28778341 28781047 -137869249 + L1VL2 LINE L1 300 2807 -3076 2 804 1014 97 0 0 chrX 28781047 28781181 -137869115 + B1_Mus2 SINE Alu 1 134 -13 3 804 15191 161 17 60 chrX 28781181 28783078 -137867218 + L1VL2 LINE L1 2808 4610 -1273 2 804 3405 137 29 2 chrX 28783079 28783629 -137866667 + Lx LINE L1 6088 6652 -2 3 804 21 0 0 0 chrX 28783629 28783650 -137866646 + AT_rich Low_complexity Low_complexity 1 21 0 3 804 2854 24 6 0 chrX 28784232 28784565 -137865731 + IAPLTR1a_Mm LTR ERVK 1 335 -2 3 804 28390 30 16 16 chrX 28784565 28788143 -137862153 + IAPEz-int LTR ERVK 6 3585 -2896 3 804 19938 17 2 2 chrX 28788135 28790501 -137859795 + IAPEz-int LTR ERVK 4117 6481 0 3 804 2914 27 3 0 chrX 28790501 28790837 -137859459 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 804 450 0 0 0 chrX 28791540 28791590 -137858706 + (TC)n Simple_repeat Simple_repeat 2 51 0 3 804 237 33 0 0 chrX 28791591 28791621 -137858675 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 804 241 278 95 69 chrX 28791937 28792053 -137858243 + B1F SINE Alu 29 147 -2 3 804 220 272 95 36 chrX 28792086 28792170 -137858126 + B1F SINE Alu 29 117 -32 3 804 798 289 39 24 chrX 28792953 28793159 -137857137 - B3 SINE B2 -6 210 2 3 804 1021 105 7 0 chrX 28793416 28793559 -137856737 - B1_Mus1 SINE Alu -1 147 4 3 804 372 261 160 10 chrX 28793560 28793760 -137856536 - B4 SINE B4 -62 230 1 3 804 225 0 0 0 chrX 28794015 28794040 -137856256 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 3 804 21 36 0 0 chrX 28794403 28794431 -137855865 + AT_rich Low_complexity Low_complexity 1 28 0 3 804 325 322 49 8 chrX 28794679 28794801 -137855495 - B1F SINE Alu -3 146 20 3 804 23528 149 6 1 chrX 28795052 28800222 -137850074 + L1_Mus3 LINE L1 1445 6634 -4 3 804 208 147 0 0 chrX 28800653 28800687 -137849609 + (A)n Simple_repeat Simple_repeat 1 34 0 3 804 240 111 0 0 chrX 28800879 28800915 -137849381 + (TATATG)n Simple_repeat Simple_repeat 3 38 0 3 804 333 0 0 0 chrX 28800915 28800951 -137849345 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 804 283 282 14 40 chrX 28801537 28801611 -137848685 + PB1D7 SINE Alu 1 72 -48 3 804 266 341 22 11 chrX 28802543 28802632 -137847664 - B3 SINE B2 -14 202 113 3 804 222 284 0 69 chrX 28802636 28802708 -137847588 - B4A SINE B4 -139 153 87 3 804 443 293 72 20 chrX 28802717 28802870 -137847426 - B3 SINE B2 -53 163 3 3 804 531 0 0 0 chrX 28802954 28803013 -137847283 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 804 6644 100 25 11 chrX 28803136 28804896 -137845400 - L1_Mus1 LINE L1 0 6567 4795 3 804 7016 77 7 13 chrX 28804897 28806078 -137844218 - L1Md_F2 LINE L1 0 6582 5405 3 804 16865 153 13 16 chrX 28806076 28809404 -137840892 - L1Md_F2 LINE L1 -1075 4808 1492 3 804 6116 157 27 29 chrX 28809402 28810762 -137839534 - L1_Mus3 LINE L1 -690 5948 4601 3 804 624 180 9 0 chrX 28810761 28810872 -137839424 - Lx4A LINE L1 -228 6830 6719 3 804 1886 262 70 13 chrX 28811731 28812341 -137837955 - Lx2B LINE L1 -14 6986 6342 3 804 2975 153 65 15 chrX 28812338 28812498 -137837798 + L1_Mur2 LINE L1 4537 4730 -1147 3 804 297 0 0 0 chrX 28812498 28812531 -137837765 + (TAA)n Simple_repeat Simple_repeat 1 33 0 3 804 2975 153 65 15 chrX 28812531 28812981 -137837315 + L1_Mur2 LINE L1 4731 5178 -699 3 804 506 159 0 27 chrX 28813154 28813264 -137837032 - URR1B DNA MER1_type 0 225 119 3 804 351 284 71 47 chrX 28813594 28813764 -137836532 + RLTR1B LTR ERV1 166 339 -173 3 804 24 32 0 0 chrX 28813902 28813933 -137836363 + AT_rich Low_complexity Low_complexity 1 31 0 3 804 1693 242 7 18 chrX 28814073 28814670 -137835626 - Lx6 LINE L1 -1352 6108 5515 3 804 35276 48 2 3 chrX 28814672 28820790 -137829506 - L1Md_T LINE L1 -1 6584 374 3 804 1203 256 43 12 chrX 28820781 28821197 -137829099 - Lx6 LINE L1 -347 5533 5105 3 804 1081 221 40 9 chrX 28821202 28821527 -137828769 - Lx6 LINE L1 -2035 3845 3511 3 804 644 240 57 33 chrX 28821527 28821691 -137828605 - Lx6 LINE L1 -3397 2480 2324 3 804 549 0 0 0 chrX 28821691 28821752 -137828544 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 804 644 240 57 33 chrX 28821752 28821798 -137828498 - Lx6 LINE L1 -3554 2323 2266 3 804 650 322 50 18 chrX 28821804 28822022 -137828274 - ORR1D2 LTR MaLR -145 225 1 3 804 407 393 4 0 chrX 28822024 28822258 -137828038 + Lx8 LINE L1 6956 7190 -283 3 804 935 287 47 22 chrX 28822364 28822724 -137827572 + ORR1D2 LTR MaLR 1 369 -1 3 804 450 256 8 23 chrX 28822879 28823011 -137827285 + Lx8 LINE L1 6640 6769 -704 3 804 242 442 0 0 chrX 28823400 28823538 -137826758 + RMER1C Other Other 535 672 -670 3 804 273 380 0 0 chrX 28823860 28823981 -137826315 + RMER1C Other Other 537 657 -685 3 804 368 68 27 27 chrX 28824741 28824816 -137825480 + (CAAAA)n Simple_repeat Simple_repeat 3 77 0 3 804 260 386 10 25 chrX 28826092 28826294 -137824002 + RMER1C Other Other 626 824 -518 3 804 233 55 47 0 chrX 28826656 28826711 -137823585 - L1Md_F3 LINE L1 0 6582 6526 3 804 280 29 0 0 chrX 28826702 28826736 -137823560 + L1Md_F LINE L1 1034 1067 -5549 3 804 2555 99 0 2 chrX 28826734 28827129 -137823167 + L1Md_F LINE L1 1977 2370 -3513 3 804 824 62 0 0 chrX 28827140 28827252 -137823044 + L1Md_F LINE L1 2850 2961 -2922 3 804 3030 12 0 0 chrX 28827255 28827592 -137822704 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 804 52990 24 5 8 chrX 28827592 28834058 -137816238 - IAPEz-int LTR ERVK 0 6481 8 3 804 3027 9 6 0 chrX 28834058 28834393 -137815903 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 804 10247 80 0 6 chrX 28834393 28835797 -137814499 + L1Md_F LINE L1 2959 4353 -1530 3 100 2075 247 58 45 chrX 28835790 28837080 -137813216 - L1Md_F LINE L1 -5407 1207 280 3 805 822 177 69 16 chrX 28837117 28837306 -137812990 - L1_Mm LINE L1 -433 5450 5252 3 805 849 273 10 0 chrX 28837449 28837654 -137812642 + B3 SINE B2 1 207 -9 3 805 540 45 0 0 chrX 28837738 28837805 -137812491 + (TTCC)n Simple_repeat Simple_repeat 4 70 0 3 805 464 307 29 68 chrX 28837872 28838078 -137812218 - B3A SINE B2 0 198 1 3 805 645 270 51 29 chrX 28838380 28838655 -137811641 + Lx7 LINE L1 5857 6137 -1559 3 805 1914 264 50 24 chrX 28838691 28839270 -137811026 + Lx7 LINE L1 6061 6654 -1042 3 805 656 225 56 55 chrX 28839533 28839883 -137810413 + RMER3D-int LTR ERVK 488 849 -1993 3 805 533 201 120 34 chrX 28839904 28840079 -137810217 + RMER3D-int LTR ERVK 617 806 -2036 3 805 467 165 13 0 chrX 28840137 28840216 -137810080 + RMER3D-int LTR ERVK 489 568 -2274 3 805 435 180 5 68 chrX 28840229 28840420 -137809876 + GA-rich Low_complexity Low_complexity 2 180 0 3 805 2451 182 89 82 chrX 28840442 28840788 -137809508 + RMER3D-int LTR ERVK 1016 1383 -1459 3 805 3300 46 2 0 chrX 28840788 28841183 -137809113 - MTA_Mm LTR MaLR 0 396 1 3 805 2451 181 91 88 chrX 28841183 28841534 -137808762 + RMER3D-int LTR ERVK 1384 1690 -1152 3 805 2860 215 50 55 chrX 28841505 28842461 -137807835 + RMER3D-int LTR ERVK 1891 2841 -1 3 805 2916 96 7 2 chrX 28842462 28842881 -137807415 + BGLII LTR ERVK 1 421 0 3 805 1108 214 70 55 chrX 28843151 28843552 -137806744 - RLTR21 LTR ERVK -460 1112 706 3 805 12359 106 38 2 chrX 28843553 28846864 -137803432 - L1Md_F2 LINE L1 -12 6570 1960 3 805 238 67 44 0 chrX 28846864 28846909 -137803387 + (TTG)n Simple_repeat Simple_repeat 2 48 0 3 805 7950 128 11 16 chrX 28846909 28848440 -137801856 - L1Md_F2 LINE L1 -3924 1959 446 3 805 754 159 22 49 chrX 28848451 28848636 -137801660 - RLTR21 LTR ERVK -846 726 547 3 805 1379 220 18 39 chrX 28848682 28849013 -137801283 - RLTR21 LTR ERVK -1248 324 1 3 805 243 316 0 17 chrX 28849405 28849521 -137800775 - Lx6 LINE L1 -15 7445 7332 3 805 1740 257 20 28 chrX 28849521 28849755 -137800541 - Lx6 LINE L1 -1326 6134 5904 3 805 2061 196 17 14 chrX 28849755 28850175 -137800121 - MTC LTR MaLR 0 421 1 3 805 1740 257 20 28 chrX 28850175 28850449 -137799847 - Lx6 LINE L1 -1557 5903 5630 3 805 1188 192 28 3 chrX 28850478 28850760 -137799536 - L1_Mur3 LINE L1 -2593 3287 2999 3 805 3605 155 20 24 chrX 28850761 28851292 -137799004 - L1_Mus3 LINE L1 -8 6630 6101 3 805 2650 82 0 3 chrX 28851292 28851635 -137798661 - ORR1A1 LTR MaLR -4 342 1 3 805 3605 155 20 24 chrX 28851635 28851759 -137798537 - L1_Mus3 LINE L1 -538 6100 5978 3 805 2302 69 33 0 chrX 28851759 28852063 -137798233 + L1Md_F2 LINE L1 5273 5586 -297 3 805 7378 76 5 10 chrX 28852064 28853062 -137797234 + L1Md_F2 LINE L1 5588 6580 -2 3 805 1298 314 35 39 chrX 28853074 28853615 -137796681 - RodERV21-int LTR ERV1 -3339 1652 1114 3 805 336 269 58 65 chrX 28853754 28853893 -137796403 - RodERV21-int LTR ERV1 -3961 1030 893 3 805 226 297 13 13 chrX 28854932 28855007 -137795289 + GA-rich Low_complexity Low_complexity 3 77 0 3 805 431 245 27 40 chrX 28855158 28855307 -137794989 - L1_Rod LINE L1 -313 5534 5388 3 805 2076 205 67 31 chrX 28855318 28855872 -137794424 + RLTR31A_Mm LTR ERVK 11 584 0 3 805 21 0 0 0 chrX 28855970 28855991 -137794305 + AT_rich Low_complexity Low_complexity 1 21 0 3 805 778 149 7 47 chrX 28856125 28856273 -137794023 - B1_Mus1 SINE Alu 0 148 7 3 805 3677 313 42 48 chrX 28856721 28857012 -137793284 - RodERV21-int LTR ERV1 -198 4793 4501 3 805 2465 123 35 54 chrX 28857012 28857440 -137792856 - RLTR9B2 LTR ERVK 0 420 1 3 805 3677 313 42 48 chrX 28857440 28859048 -137791248 - RodERV21-int LTR ERV1 -491 4500 2905 3 805 3373 74 20 16 chrX 28859163 28859657 -137790639 + LTRIS2 LTR ERV1 69 564 0 3 805 730 120 52 10 chrX 28859806 28859977 -137790319 + RLTR1B-int LTR ERV1 63 293 -3006 3 805 957 126 90 17 chrX 28860321 28860499 -137789797 + RMER16-int LTR ERVK 141 331 -5075 3 805 4097 153 52 18 chrX 28860485 28861190 -137789106 + RMER16-int LTR ERVK 690 1418 -3988 3 805 2657 201 109 41 chrX 28861194 28862090 -137788206 + RLTR1B-int LTR ERV1 835 1797 -3266 3 805 183 42 0 0 chrX 28862090 28862114 -137788182 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 805 5262 87 152 89 chrX 28862114 28863357 -137786939 + RLTR1B-int LTR ERV1 1260 2555 -744 3 805 1126 152 58 5 chrX 28863344 28863605 -137786691 + RLTR1B-int LTR ERV1 2669 2813 -486 3 805 1089 167 54 25 chrX 28863831 28864071 -137786225 + RLTR1B-int LTR ERV1 4791 5037 -26 3 805 3475 62 20 12 chrX 28864071 28864563 -137785733 + LTRIS2 LTR ERV1 69 564 0 3 805 1163 273 3 7 chrX 28865037 28865347 -137784949 - MuRRS4-int LTR ERV1 -118 4945 4637 3 805 751 196 0 7 chrX 28865347 28865496 -137784800 - MuRRS4-int LTR ERV1 -128 4935 4788 3 805 5304 155 58 32 chrX 28865487 28867794 -137782502 - MuRRS4-int LTR ERV1 -792 4271 1104 3 805 1455 277 33 7 chrX 28867816 28868238 -137782058 - MuRRS4-int LTR ERV1 -3619 1444 1012 3 805 707 270 16 78 chrX 28868387 28868644 -137781652 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 3 805 627 145 92 17 chrX 28868644 28868763 -137781533 - MuRRS4-int LTR ERV1 -4186 877 750 3 805 333 172 80 34 chrX 28868747 28868865 -137781431 - RMER16-int LTR ERVK -3958 1448 1386 3 805 4324 129 23 10 chrX 28868953 28869640 -137780656 - RMER16-int LTR ERVK -4045 1361 666 3 805 1251 233 66 22 chrX 28869669 28869989 -137780307 - MuRRS4-int LTR ERV1 -4388 675 342 3 805 697 243 51 77 chrX 28870324 28870875 -137779421 - MuRRS4-int LTR ERV1 -4565 498 5 3 805 567 228 101 34 chrX 28870877 28871086 -137779210 - LTRIS4 LTR ERV1 0 507 285 3 805 341 22 22 0 chrX 28871751 28871797 -137778499 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 3 805 481 347 27 42 chrX 28871957 28872435 -137777861 - RodERV21-int LTR ERV1 -3035 4056 3586 3 805 1331 277 16 51 chrX 28872560 28872990 -137777306 - RodERV21-int LTR ERV1 -2273 2718 2304 3 805 4527 108 24 0 chrX 28872995 28873659 -137776637 - L1_Mus3 LINE L1 -247 6391 5712 3 805 1531 137 0 0 chrX 28873661 28873887 -137776409 + L1_Mus3 LINE L1 5473 5698 -185 3 805 1563 190 12 21 chrX 28873887 28874215 -137776081 - RLTR14 LTR ERV1 -51 331 7 3 805 8839 189 104 24 chrX 28874240 28876201 -137774095 - RLTR14-int LTR ERV1 -5 5312 3195 3 805 1120 170 190 48 chrX 28876201 28876559 -137773737 + RLTR9E LTR ERVK 1 409 0 3 805 715 220 11 56 chrX 28876561 28876824 -137773472 + ETnERV2-int LTR ERVK 2 317 -2997 3 805 346 146 0 18 chrX 28876879 28876935 -137773361 + ETnERV2-int LTR ERVK 1074 1128 -6278 3 805 627 14 0 0 chrX 28877427 28877499 -137772797 + (TTC)n Simple_repeat Simple_repeat 2 73 0 3 805 1902 179 65 12 chrX 28877507 28877925 -137772371 + ETnERV2-int LTR ERVK 1649 2088 -5318 3 805 2865 175 38 30 chrX 28877946 28878600 -137771696 + ETnERV2-int LTR ERVK 1934 3135 -4271 3 805 7744 72 1 9 chrX 28878601 28879666 -137770630 - L1Md_F2 LINE L1 -14 6568 5513 3 805 843 142 6 105 chrX 28879666 28879847 -137770449 + ETnERV2-int LTR ERVK 2028 2190 -2654 3 805 3818 131 47 3 chrX 28880072 28880693 -137769603 + ETnERV2-int LTR ERVK 3441 4088 -3318 3 805 812 224 148 10 chrX 28880679 28880989 -137769307 + ETnERV2-int LTR ERVK 4597 4949 -2295 3 805 33995 89 4 20 chrX 28881015 28887373 -137762923 - L1Md_F2 LINE L1 -12 6570 315 3 805 7028 89 1 6 chrX 28887374 28888308 -137761988 - L1Md_F LINE L1 -5494 1025 97 3 805 2073 89 28 16 chrX 28888308 28888626 -137761670 + RLTRETN_Mm LTR ERVK 1 322 0 3 805 2857 34 0 0 chrX 28888626 28888980 -137761316 + ETnERV-int LTR ERVK 1 354 -2960 3 805 24092 31 15 10 chrX 28888951 28893511 -137756785 + MMETn-int LTR ERVK 180 4844 0 3 805 2041 89 28 16 chrX 28893511 28893829 -137756467 + RLTRETN_Mm LTR ERVK 1 322 0 3 805 379 152 0 6 chrX 28893905 28893997 -137756299 + MMETn-int LTR ERVK 2473 2553 -2291 3 805 4869 55 0 7 chrX 28893998 28894607 -137755689 + L1Md_F2 LINE L1 5966 6570 -12 3 805 273 67 67 0 chrX 28894619 28894679 -137755617 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 4 805 2898 180 13 40 chrX 28894679 28895598 -137754698 + MMETn-int LTR ERVK 2541 3719 -1125 3 805 692 211 0 0 chrX 28895593 28895716 -137754580 + MMETn-int LTR ERVK 6539 6661 -745 3 805 3156 206 44 17 chrX 28895747 28896492 -137753804 - RLTR14-int LTR ERV1 -2117 3200 2436 4 805 1856 217 63 44 chrX 28897935 28898460 -137751836 + RLTR40 LTR ERVK 22 556 -261 4 805 350 134 15 0 chrX 28898460 28898527 -137751769 + (GA)n Simple_repeat Simple_repeat 2 69 0 4 805 503 291 73 53 chrX 28898545 28898729 -137751567 + RLTR40 LTR ERVK 566 752 -65 4 805 6228 95 24 5 chrX 28898729 28899605 -137750691 - RLTR13B1 LTR ERVK 0 893 1 4 805 503 291 73 53 chrX 28899605 28899667 -137750629 + RLTR40 LTR ERVK 753 817 0 4 805 315 0 0 0 chrX 28899858 28899893 -137750403 + (TAA)n Simple_repeat Simple_repeat 2 36 0 4 805 207 0 0 0 chrX 28899893 28899916 -137750380 + (GAA)n Simple_repeat Simple_repeat 1 23 0 4 805 1276 27 0 0 chrX 28900289 28900436 -137749860 + B1_Mus2 SINE Alu 1 147 0 4 805 648 237 57 10 chrX 28901642 28901834 -137748462 - Lx9 LINE L1 -243 7401 7201 4 805 381 202 0 0 chrX 28901834 28901918 -137748378 + Lx9 LINE L1 7554 7637 -7 4 805 488 287 13 0 chrX 28901927 28902077 -137748219 + Lx5 LINE L1 6825 6976 -74 4 805 387 0 0 0 chrX 28902085 28902128 -137748168 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 4 805 660 208 34 14 chrX 28902143 28902289 -137748007 + B1_Mur3 SINE Alu 1 149 0 4 805 1914 159 45 0 chrX 28902312 28902665 -137747631 + L1_Mus3 LINE L1 6262 6630 -8 4 805 26 50 0 0 chrX 28902677 28902717 -137747579 + AT_rich Low_complexity Low_complexity 1 40 0 4 805 227 263 0 0 chrX 28902783 28902840 -137747456 + A-rich Low_complexity Low_complexity 4 60 0 4 805 717 256 19 14 chrX 28902849 28903063 -137747233 + Lx4B LINE L1 6809 7023 -35 4 805 2711 175 37 2 chrX 28903099 28903688 -137746608 - L1_Mur2 LINE L1 -1176 4701 4092 4 805 10063 142 39 25 chrX 28903688 28905063 -137745233 - RLTR22_Mur LTR ERVK 0 1848 461 4 805 670 75 0 19 chrX 28905063 28905171 -137745125 + (TAG)n Simple_repeat Simple_repeat 3 108 0 4 805 10063 142 39 25 chrX 28905171 28905618 -137744678 - RLTR22_Mur LTR ERVK -1388 460 3 4 805 1140 188 24 21 chrX 28905618 28905906 -137744390 - L1_Mur2 LINE L1 -1782 4095 3807 4 805 1309 143 30 0 chrX 28905959 28906190 -137744106 + L1_Mus4 LINE L1 6399 6636 0 4 805 8752 20 0 0 chrX 28906222 28907280 -137743016 + L1Md_T LINE L1 4529 5586 -297 4 805 7995 57 0 0 chrX 28907280 28908276 -137742020 + L1Md_T LINE L1 5587 6582 0 4 805 180 0 0 0 chrX 28908645 28908665 -137741631 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 4 805 24 0 0 0 chrX 28910056 28910080 -137740216 + AT_rich Low_complexity Low_complexity 1 24 0 4 805 287 276 22 7 chrX 28910364 28910499 -137739797 + L1_Mur2 LINE L1 4334 4470 -1407 4 805 733 324 44 26 chrX 28910504 28910932 -137739364 + Lx6 LINE L1 6506 7280 -180 4 805 1421 197 20 83 chrX 28910921 28911365 -137738931 - L1_Mur2 LINE L1 -2142 3735 3320 4 805 1160 109 17 0 chrX 28911368 28911543 -137738753 - L1_Mus1 LINE L1 0 6567 6390 4 805 7986 109 6 6 chrX 28911544 28913113 -137737183 - L1_Mus1 LINE L1 -449 6118 4549 4 805 2534 34 2 274 chrX 28913113 28913649 -137736647 - RLTR10 LTR ERVK 0 390 1 4 805 16080 23 16 0 chrX 28913651 28915592 -137734704 - RLTR10-int LTR ERVK -3 1984 13 4 805 295 143 0 0 chrX 28915623 28915679 -137734617 - RLTR10-int LTR ERVK -1931 56 1 4 805 958 46 15 15 chrX 28915679 28915811 -137734485 - RLTR10 LTR ERVK 0 390 259 4 805 275 100 0 62 chrX 28915822 28915886 -137734410 - RLTR10 LTR ERVK -70 320 261 4 805 2148 40 11 126 chrX 28915887 28916261 -137734035 - RLTR10 LTR ERVK -59 331 1 4 805 12751 139 7 0 chrX 28916261 28917668 -137732628 - L1_Mus1 LINE L1 -1329 4554 3134 4 805 210 37 0 0 chrX 28917668 28917695 -137732601 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 805 12751 139 7 0 chrX 28917695 28918533 -137731763 - L1_Mus1 LINE L1 -2750 3133 2295 4 805 1280 183 52 0 chrX 28918534 28918785 -137731511 + L1VL1 LINE L1 3 266 -6156 4 805 27336 109 17 52 chrX 28918783 28922216 -137728080 + L1Md_F2 LINE L1 273 3463 -2420 4 805 1136 90 73 0 chrX 28922216 28922394 -137727902 + B2_Mm2 SINE B2 5 195 0 4 805 27336 88 7 64 chrX 28922394 28924514 -137725782 + L1Md_F2 LINE L1 3464 5585 -298 4 805 7605 70 2 0 chrX 28924515 28925497 -137724799 + L1Md_F2 LINE L1 5587 6570 -12 4 805 3600 77 8 30 chrX 28925498 28926325 -137723971 + L1Md_A LINE L1 964 1759 -4124 4 805 812 120 35 21 chrX 28926329 28926474 -137723822 - L1_Mus1 LINE L1 0 6567 6421 4 805 39158 10 0 1 chrX 28926642 28933634 -137716662 - L1Md_A LINE L1 0 6582 1 4 805 305 307 56 70 chrX 28933788 28934072 -137716224 - RMER17C LTR ERVK -48 362 83 4 805 5119 126 78 32 chrX 28934513 28935440 -137714856 + Lx3A LINE L1 6006 6974 -7 4 805 205 364 30 23 chrX 28936778 28936910 -137713386 + L2 LINE L2 1518 1650 -1769 4 805 549 338 39 7 chrX 28937181 28937336 -137712960 - B4A SINE B4 -2 290 131 4 805 207 114 0 0 chrX 28937434 28937469 -137712827 + (TGG)n Simple_repeat Simple_repeat 1 35 0 4 805 331 341 111 34 chrX 28937565 28937799 -137712497 + L2 LINE L2 2049 2300 -1119 4 805 4588 132 15 18 chrX 28937804 28938598 -137711698 + YREP_Mm Unknown Unknown 986 1777 -35 4 805 456 289 0 0 chrX 28939441 28939545 -137710751 + B3 SINE B2 98 201 -15 4 805 365 261 75 8 chrX 28939605 28939725 -137710571 + B1F SINE Alu 21 148 -1 4 805 966 227 19 0 chrX 28939871 28940078 -137710218 + B3 SINE B2 1 211 -5 4 805 658 319 97 34 chrX 28940311 28940580 -137709716 + B4A SINE B4 4 289 -3 4 805 22 56 0 0 chrX 28940589 28940625 -137709671 + AT_rich Low_complexity Low_complexity 1 36 0 4 805 12595 147 35 69 chrX 28940718 28943416 -137706880 + L1VL2 LINE L1 1 2495 -1120 4 805 955 119 0 0 chrX 28943416 28943550 -137706746 + B1_Mus2 SINE Alu 1 134 -13 4 805 12595 112 22 68 chrX 28943550 28943632 -137706664 + L1VL2 LINE L1 2496 2522 -1093 4 805 387 0 0 0 chrX 28943632 28943675 -137706621 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 805 11534 164 17 70 chrX 28943675 28945615 -137704681 + L1_Mm LINE L1 2824 4756 -1127 4 805 5287 139 19 1 chrX 28945616 28946467 -137703829 + Lx LINE L1 5787 6652 -2 4 805 447 19 0 0 chrX 28947763 28947815 -137702481 + (TC)n Simple_repeat Simple_repeat 2 53 0 4 805 423 0 0 0 chrX 28947816 28947863 -137702433 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 805 24 0 0 0 chrX 28948142 28948166 -137702130 + AT_rich Low_complexity Low_complexity 1 24 0 4 805 260 278 134 60 chrX 28948166 28948300 -137701996 + B1F SINE Alu 4 147 -2 4 805 224 342 47 70 chrX 28948295 28948315 -137701981 + ID_B1 SINE B4 70 195 -29 4 805 256 292 101 28 chrX 28948315 28948424 -137701872 + B1F SINE Alu 1 117 -32 4 805 864 291 14 24 chrX 28949207 28949418 -137700878 - B3 SINE B2 -6 210 2 4 805 1052 91 7 0 chrX 28949676 28949819 -137700477 - B1_Mus1 SINE Alu -1 147 4 4 805 371 251 160 10 chrX 28949820 28950020 -137700276 - B4 SINE B4 -62 230 1 4 805 230 310 127 0 chrX 28950283 28950354 -137699942 - ID4 SINE ID 0 83 4 4 805 213 296 0 0 chrX 28950587 28950631 -137699665 + ID4 SINE ID 4 47 -36 4 805 267 355 49 8 chrX 28950935 28951057 -137699239 - B1F SINE Alu -3 146 20 4 805 23987 146 5 1 chrX 28951308 28956479 -137693817 + L1_Mus3 LINE L1 1445 6634 -4 4 805 201 162 0 0 chrX 28956911 28956948 -137693348 + A-rich Low_complexity Low_complexity 2 38 0 4 805 432 143 0 0 chrX 28957112 28957177 -137693119 + (TATATG)n Simple_repeat Simple_repeat 4 68 0 4 805 186 43 0 0 chrX 28957177 28957200 -137693096 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 805 432 143 0 0 chrX 28957200 28957211 -137693085 + (TATATG)n Simple_repeat Simple_repeat 5 15 0 4 805 247 357 20 10 chrX 28957788 28957887 -137692409 + PB1D10 SINE Alu 3 102 -15 4 805 246 352 22 11 chrX 28958791 28958880 -137691416 - B3 SINE B2 -14 202 113 4 805 213 292 0 65 chrX 28958884 28958961 -137691335 - B4A SINE B4 -139 153 82 4 805 481 293 66 13 chrX 28958965 28959117 -137691179 - B3 SINE B2 -53 163 4 4 805 1831 148 244 30 chrX 28959231 28959698 -137690598 + RLTR6_Mm LTR ERV1 37 603 -51 4 100 60198 36 23 1 chrX 28959700 28967309 -137682987 + RLTR6-int LTR ERV1 2 7778 0 4 806 1793 141 254 31 chrX 28967422 28967870 -137682426 + RLTR6_Mm LTR ERV1 37 584 -70 4 806 261 0 0 0 chrX 28967959 28967988 -137682308 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 806 6507 108 24 10 chrX 28968108 28969869 -137680427 - L1_Mus1 LINE L1 0 6567 4795 4 806 6943 81 5 12 chrX 28969869 28971051 -137679245 - L1Md_F2 LINE L1 0 6582 5405 4 806 17002 154 12 16 chrX 28971049 28974378 -137675918 - L1Md_F2 LINE L1 -1075 4808 1492 4 806 6409 158 27 6 chrX 28974376 28975699 -137674597 - L1_Mus3 LINE L1 -690 5948 4601 4 806 589 189 9 0 chrX 28975698 28975809 -137674487 - Lx4A LINE L1 -228 6830 6719 4 806 2046 257 68 3 chrX 28976662 28977268 -137673028 - Lx2B LINE L1 -14 6986 6342 4 806 2907 158 66 13 chrX 28977265 28977425 -137672871 + L1_Mur2 LINE L1 4537 4730 -1147 4 806 270 0 0 0 chrX 28977425 28977455 -137672841 + (TAA)n Simple_repeat Simple_repeat 1 30 0 4 806 2907 158 66 13 chrX 28977455 28977904 -137672392 + L1_Mur2 LINE L1 4731 5178 -699 4 806 433 148 78 19 chrX 28978077 28978151 -137672145 - URR1B DNA MER1_type 0 225 146 4 806 432 0 0 0 chrX 28978151 28978199 -137672097 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 806 433 148 78 19 chrX 28978199 28978227 -137672069 - URR1B DNA MER1_type -80 145 118 4 806 347 284 71 47 chrX 28978560 28978730 -137671566 + RLTR1B LTR ERV1 166 339 -173 4 806 2796 245 21 12 chrX 28979039 28980030 -137670266 - Lx6 LINE L1 -1352 6108 5105 4 806 1091 221 40 12 chrX 28980035 28980361 -137669935 - Lx6 LINE L1 -2033 3844 3510 4 806 593 267 47 24 chrX 28980361 28980523 -137669773 - Lx6 LINE L1 -3397 2480 2324 4 806 567 0 0 0 chrX 28980523 28980586 -137669710 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 806 593 267 47 24 chrX 28980586 28980634 -137669662 - Lx6 LINE L1 -3554 2323 2266 4 806 631 327 47 14 chrX 28980647 28980858 -137669438 - ORR1D2 LTR MaLR -152 218 1 4 806 422 389 4 0 chrX 28980860 28981094 -137669202 + Lx8 LINE L1 6956 7190 -283 4 806 906 284 35 35 chrX 28981199 28981567 -137668729 + ORR1D2 LTR MaLR 1 368 -2 4 806 458 256 8 23 chrX 28981722 28981854 -137668442 + Lx8 LINE L1 6640 6769 -704 4 806 288 372 0 0 chrX 28982704 28982825 -137667471 + RMER1C Other Other 537 657 -685 4 806 383 66 26 26 chrX 28983584 28983662 -137666634 + (CAAAA)n Simple_repeat Simple_repeat 3 80 0 4 806 32606 71 9 5 chrX 28985507 28990088 -137660208 - L1Md_F3 LINE L1 0 6584 1974 4 806 180 0 0 0 chrX 28990088 28990108 -137660188 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 806 32606 124 12 24 chrX 28990108 28991882 -137658414 - L1Md_F3 LINE L1 -3910 1973 233 4 806 294 29 0 0 chrX 28993089 28993124 -137657172 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 4 806 293 418 24 18 chrX 28993712 28994048 -137656248 + RMER1C Other Other 487 824 -518 4 806 412 403 41 19 chrX 28994562 28995012 -137655284 + RMER1C Other Other 412 874 -468 4 806 265 328 36 29 chrX 28995229 28995367 -137654929 + RMER1C Other Other 451 589 -753 5 806 423 0 0 0 chrX 28995481 28995528 -137654768 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 806 256 433 18 14 chrX 28995916 28996195 -137654101 + RMER1C Other Other 585 864 -478 5 806 288 390 17 50 chrX 28997568 28997749 -137652547 + RMER1C Other Other 383 651 -691 5 806 261 434 4 9 chrX 28998394 28998624 -137651672 + RMER1C Other Other 555 783 -559 5 806 284 409 26 19 chrX 28998846 28999110 -137651186 + RMER1C Other Other 464 729 -613 5 806 390 419 12 0 chrX 28999390 28999638 -137650658 + RMER1C Other Other 421 671 -671 5 806 268 407 20 15 chrX 28999747 28999944 -137650352 + RMER1C Other Other 560 757 -585 5 806 319 367 71 12 chrX 29000112 29000352 -137649944 + RMER1C Other Other 595 848 -494 1 806 7504 215 52 9 chrX 29000613 29003526 -137646770 - Lx4B LINE L1 -276 6782 3734 2 806 2799 170 33 1 chrX 29003538 29004334 -137645962 + Lx3C LINE L1 5353 6167 -809 3 806 2760 39 6 177 chrX 29004338 29004808 -137645488 + RLTR10 LTR ERVK 1 390 0 4 806 7772 37 1 10 chrX 29004843 29005825 -137644471 + RLTR10-int LTR ERVK 16 988 -999 4 806 8286 17 6 1 chrX 29005903 29006891 -137643405 + RLTR10-int LTR ERVK 992 1984 -3 4 806 2782 36 6 173 chrX 29006893 29007361 -137642935 + RLTR10 LTR ERVK 1 390 0 4 806 932 171 123 9 chrX 29007379 29007598 -137642698 + Lx3C LINE L1 6180 6423 -553 3 806 969 122 0 0 chrX 29007591 29007747 -137642549 + L1_Mm LINE L1 4206 4361 -1522 5 806 1615 63 13 5 chrX 29007759 29007983 -137642313 - MT2_Mm LTR ERVL 0 493 268 6 806 22588 132 15 74 chrX 29007983 29012588 -137637708 - L1_Mm LINE L1 -145 5738 1408 7 806 3897 11 0 0 chrX 29012739 29013176 -137637120 - L1Md_T LINE L1 0 6582 6146 8 806 816 154 0 20 chrX 29013217 29013369 -137636927 + RMER3D-int LTR ERVK 1385 1533 -1309 9 806 529 221 40 33 chrX 29013397 29013547 -137636749 + RMER3D-int LTR ERVK 1528 1678 -1164 9 806 2620 202 117 14 chrX 29013569 29014493 -137635803 + MYSERV16_I-int LTR ERVK 1308 2326 0 1 806 2700 102 19 2 chrX 29014493 29014907 -137635389 + BGLII LTR ERVK 1 421 0 1 806 1324 203 75 44 chrX 29015148 29015577 -137634719 - RLTR21 LTR ERVK -153 1251 706 1 806 32020 57 2 4 chrX 29015577 29020586 -137629710 - L1Md_F2 LINE L1 -12 6570 1568 1 806 459 207 11 0 chrX 29020581 29020668 -137629628 - L1VL1 LINE L1 -6140 282 195 1 806 20424 130 6 6 chrX 29020669 29024511 -137625785 + L1_Mus1 LINE L1 2294 6133 -434 1 806 1156 76 0 0 chrX 29024514 29024672 -137625624 + L1_Mus1 LINE L1 6410 6567 0 1 806 1303 204 20 92 chrX 29024674 29025122 -137625174 + L1_Mur2 LINE L1 3320 3735 -2142 1 806 747 331 42 19 chrX 29025105 29025540 -137624756 - Lx6 LINE L1 -164 7296 6506 1 806 367 261 22 7 chrX 29025545 29025680 -137624616 - L1_Mur2 LINE L1 -1407 4470 4334 1 806 24 0 0 0 chrX 29025965 29025989 -137624307 + AT_rich Low_complexity Low_complexity 1 24 0 1 806 180 0 0 0 chrX 29027382 29027402 -137622894 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 1 806 1387 133 25 4 chrX 29027891 29028132 -137622164 - L1_Mus4 LINE L1 0 6636 6391 2 806 805 153 199 0 chrX 29028176 29028417 -137621879 + L1_Mur2 LINE L1 3807 4095 -1782 2 806 10122 145 30 24 chrX 29028417 29028882 -137621414 + RLTR22_Mur LTR ERVK 1 460 -1388 2 806 349 66 0 32 chrX 29028882 29028945 -137621351 + (CTA)n Simple_repeat Simple_repeat 3 63 0 2 806 10122 145 30 24 chrX 29028945 29030315 -137619981 + RLTR22_Mur LTR ERVK 461 1848 0 2 806 2685 179 32 2 chrX 29030315 29030907 -137619389 + L1_Mur2 LINE L1 4092 4701 -1176 2 806 691 238 7 12 chrX 29030969 29031154 -137619142 - Lx4B LINE L1 -64 6994 6809 2 806 28 48 0 0 chrX 29031281 29031323 -137618973 + AT_rich Low_complexity Low_complexity 1 42 0 2 806 1977 148 27 0 chrX 29031336 29031674 -137618622 - L1_Mus3 LINE L1 -8 6630 6284 2 806 591 232 35 14 chrX 29031703 29031847 -137618449 - B1_Mur2 SINE Alu -2 147 1 2 806 321 26 0 0 chrX 29031859 29031897 -137618399 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2 806 473 287 13 0 chrX 29031905 29032055 -137618241 - Lx5 LINE L1 -74 6976 6825 2 806 398 191 0 0 chrX 29032064 29032148 -137618148 - Lx9 LINE L1 -7 7637 7554 3 806 681 232 57 10 chrX 29032148 29032340 -137617956 + Lx9 LINE L1 7201 7401 -243 3 806 275 0 0 28 chrX 29033871 29033907 -137616389 + (TTA)n Simple_repeat Simple_repeat 2 36 0 3 806 636 280 52 44 chrX 29034098 29034160 -137616136 - RLTR40 LTR ERVK 0 817 753 3 806 6177 91 34 2 chrX 29034160 29034611 -137615685 + RLTR13B1 LTR ERVK 1 469 -424 3 806 396 0 0 0 chrX 29034611 29034655 -137615641 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 806 6177 91 34 2 chrX 29034655 29035069 -137615227 + RLTR13B1 LTR ERVK 470 892 -1 3 806 636 280 52 44 chrX 29035069 29035256 -137615040 - RLTR40 LTR ERVK -65 752 566 3 806 515 154 8 0 chrX 29035256 29035373 -137614923 + CT-rich Low_complexity Low_complexity 2 119 0 3 806 1874 229 56 31 chrX 29035375 29035897 -137614399 - RLTR40 LTR ERVK -261 556 22 3 806 3094 205 51 16 chrX 29037352 29038091 -137612205 + RLTR14-int LTR ERV1 2436 3200 -2117 3 806 726 195 0 0 chrX 29038121 29038244 -137612052 - MMETn-int LTR ERVK -745 6661 6539 3 806 2873 176 15 44 chrX 29038239 29039182 -137611114 - MMETn-int LTR ERVK -1703 3141 2541 3 806 4774 64 0 7 chrX 29039182 29039791 -137610505 - L1Md_F2 LINE L1 -12 6570 5966 3 806 646 259 31 141 chrX 29039791 29039884 -137610412 - MMETn-int LTR ERVK -2124 5120 5040 3 806 6445 93 4 6 chrX 29039948 29040881 -137609415 + L1Md_F2 LINE L1 192 1122 -5494 4 806 30950 80 1 16 chrX 29040882 29046029 -137604267 + L1Md_F2 LINE L1 519 5586 -297 4 806 7560 74 4 0 chrX 29046029 29047021 -137603275 + L1Md_F2 LINE L1 5587 6582 0 4 806 29333 93 2 1 chrX 29047021 29051508 -137598788 + L1Md_F2 LINE L1 1114 5586 -297 4 806 7825 56 1 2 chrX 29051509 29052491 -137597805 + L1Md_F2 LINE L1 5588 6568 -14 4 806 2536 182 34 30 chrX 29052492 29053146 -137597150 - ETnERV2-int LTR ERVK -4283 3123 1934 4 806 1830 161 65 14 chrX 29053170 29053587 -137596709 - ETnERV2-int LTR ERVK -5321 2085 1648 4 806 256 182 0 18 chrX 29054106 29054162 -137596134 - RLTR45-int LTR ERVK -5099 2145 2091 4 806 671 233 17 69 chrX 29054157 29054480 -137595816 - MMETn-int LTR ERVK -2942 372 2 4 806 1146 175 187 45 chrX 29054482 29054840 -137595456 - RLTR9E LTR ERVK 0 409 1 4 806 6535 198 43 29 chrX 29054840 29056346 -137593950 + RLTR14-int LTR ERV1 3195 4721 -596 4 806 729 61 0 115 chrX 29056346 29056476 -137593820 + RLTRETN_Mm LTR ERVK 1 115 -207 4 806 10520 14 0 0 chrX 29056501 29058446 -137591850 - L1Md_A LINE L1 -5 6577 4633 4 806 1094 318 7 31 chrX 29059622 29060044 -137590252 + RodERV21-int LTR ERV1 1253 1664 -3327 4 806 324 78 15 15 chrX 29060044 29060109 -137590187 - L1Md_F2 LINE L1 -3 6579 6515 4 806 4260 64 44 4 chrX 29060109 29060881 -137589415 - L1Md_F2 LINE L1 -520 6062 5273 4 806 3676 144 21 24 chrX 29060881 29061005 -137589291 + L1_Mus3 LINE L1 5978 6100 -538 5 806 2724 70 0 0 chrX 29061005 29061347 -137588949 + ORR1A1 LTR MaLR 1 342 -4 5 806 3676 144 21 24 chrX 29061347 29061877 -137588419 + L1_Mus3 LINE L1 6101 6630 -8 5 806 1006 206 25 3 chrX 29061878 29062161 -137588135 + L1_Mur3 LINE L1 2999 3287 -2593 5 806 1572 259 21 28 chrX 29062168 29062465 -137587831 + Lx6 LINE L1 5607 5903 -1557 5 806 2039 196 17 14 chrX 29062465 29062885 -137587411 + MTC LTR MaLR 1 421 0 5 806 1572 259 21 28 chrX 29062885 29063119 -137587177 + Lx6 LINE L1 5904 6134 -1326 5 806 1436 220 22 40 chrX 29063625 29063947 -137586349 + RLTR21 LTR ERVK 9 324 -1248 5 806 291 28 0 0 chrX 29063964 29064000 -137586296 + (T)n Simple_repeat Simple_repeat 1 36 0 5 806 845 154 11 56 chrX 29064007 29064186 -137586110 + RLTR21 LTR ERVK 547 717 -855 5 806 12682 112 5 34 chrX 29064189 29067009 -137583287 + L1Md_F2 LINE L1 217 3165 -2718 5 806 9563 82 0 4 chrX 29066992 29068359 -137581937 + L1Md_F2 LINE L1 4225 5586 -297 5 806 7306 75 11 2 chrX 29068359 29069334 -137580962 + L1Md_F2 LINE L1 5587 6570 -12 5 806 1286 220 65 36 chrX 29069334 29069765 -137580531 + RLTR21 LTR ERVK 708 1254 -150 5 806 2860 96 7 2 chrX 29070004 29070423 -137579873 - BGLII LTR ERVK 0 421 1 5 806 2646 215 43 52 chrX 29070424 29071347 -137578949 - RMER3D-int LTR ERVK -1 2841 1927 5 806 2079 195 90 79 chrX 29071369 29071704 -137578592 - RMER3D-int LTR ERVK -1164 1678 1384 5 806 3231 51 2 0 chrX 29071704 29072099 -137578197 + MTA_Mm LTR MaLR 1 396 0 5 806 2079 195 90 79 chrX 29072099 29072421 -137577875 - RMER3D-int LTR ERVK -1459 1383 1014 5 806 547 139 71 24 chrX 29072466 29072636 -137577660 + CT-rich Low_complexity Low_complexity 3 180 0 6 806 262 326 45 0 chrX 29072636 29072725 -137577571 + polypyrimidine Low_complexity Low_complexity 2 94 0 6 806 469 229 72 37 chrX 29072733 29073055 -137577241 - RMER3D-int LTR ERVK -2038 804 354 5 806 597 212 25 40 chrX 29073121 29073322 -137576974 - RMER3D-int LTR ERVK -1993 849 652 6 806 462 148 0 0 chrX 29073337 29073425 -137576871 - RMER3D-int LTR ERVK -2278 564 489 6 806 1819 259 47 21 chrX 29073689 29074265 -137576031 - Lx7 LINE L1 -1042 6654 6064 6 806 602 270 51 29 chrX 29074300 29074575 -137575721 - Lx7 LINE L1 -1559 6137 5857 6 806 602 271 29 68 chrX 29074877 29075083 -137575213 + B3A SINE B2 1 198 0 6 806 327 25 0 0 chrX 29075152 29075192 -137575104 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 6 806 871 273 10 0 chrX 29075277 29075482 -137574814 - B3 SINE B2 -9 207 1 6 806 1077 267 82 0 chrX 29075902 29076194 -137574102 - MER2 DNA MER2_type -24 321 6 6 806 857 161 62 19 chrX 29076359 29076568 -137573728 + L1_Mm LINE L1 5234 5451 -432 6 806 488 298 21 113 chrX 29076614 29077092 -137573204 + L1VL1 LINE L1 217 693 -5941 7 806 424 254 16 8 chrX 29077123 29077250 -137573046 + L1Md_F LINE L1 578 705 -5814 7 806 2091 202 11 0 chrX 29077261 29077731 -137572565 + L1Md_F LINE L1 630 1104 -5415 7 806 24411 130 18 46 chrX 29077734 29082073 -137568223 + L1VL1 LINE L1 1080 5234 -649 7 806 504 0 0 0 chrX 29082073 29082129 -137568167 + (TA)n Simple_repeat Simple_repeat 2 57 0 7 806 24411 130 18 47 chrX 29082129 29082622 -137567674 + L1VL1 LINE L1 5235 5737 -146 7 806 1615 63 13 5 chrX 29082622 29082846 -137567450 + MT2_Mm LTR ERVL 268 493 0 7 806 931 135 0 0 chrX 29082858 29083014 -137567282 - L1_Mm LINE L1 -1522 4361 4206 7 806 3611 180 50 5 chrX 29083007 29084039 -137566257 - Lx3C LINE L1 -553 6423 5353 7 806 9870 184 30 14 chrX 29084051 29086904 -137563392 + Lx4A LINE L1 3725 6631 -427 7 806 23864 44 0 0 chrX 29086904 29090019 -137560277 + L1_Mm LINE L1 1710 4824 -1059 7 806 290 393 25 31 chrX 29090123 29090627 -137559669 - RMER1C Other Other -477 865 374 7 806 369 423 12 0 chrX 29090735 29090983 -137559313 - RMER1C Other Other -671 671 421 7 806 300 405 26 19 chrX 29091259 29091523 -137558773 - RMER1C Other Other -613 729 464 8 806 245 428 12 29 chrX 29091639 29091983 -137558313 - RMER1C Other Other -496 846 509 8 806 275 422 23 29 chrX 29092453 29092996 -137557300 - RMER1C Other Other -616 726 378 8 806 262 402 44 6 chrX 29093629 29093809 -137556487 - RMER1C Other Other -766 576 419 8 806 328 436 21 19 chrX 29093941 29094480 -137555816 - RMER1C Other Other -509 833 378 8 806 441 0 0 0 chrX 29094840 29094889 -137555407 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 806 216 0 0 0 chrX 29094889 29094912 -137555384 + (TA)n Simple_repeat Simple_repeat 2 25 0 8 806 227 403 35 22 chrX 29095021 29095252 -137555044 - RMER1C Other Other -605 737 504 8 806 493 386 35 15 chrX 29095378 29095826 -137554470 - RMER1C Other Other -468 874 375 8 806 264 30 0 0 chrX 29097246 29097279 -137553017 + (T)n Simple_repeat Simple_repeat 1 33 0 8 807 30935 120 11 28 chrX 29098483 29100246 -137550050 + L1Md_F3 LINE L1 233 1968 -3915 9 807 207 0 0 0 chrX 29100246 29100269 -137550027 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9 807 30935 69 2 10 chrX 29100269 29103922 -137546374 + L1Md_F3 LINE L1 1969 5585 -298 9 807 7682 63 10 0 chrX 29103923 29104910 -137545386 + L1Md_F3 LINE L1 5588 6584 0 9 807 260 358 6 16 chrX 29105275 29105488 -137544808 - RMER1C Other Other -468 874 626 9 807 306 162 0 0 chrX 29106755 29106829 -137543467 + T-rich Low_complexity Low_complexity 1 74 0 9 807 231 441 4 4 chrX 29107249 29107479 -137542817 - RMER1C Other Other -701 641 412 9 807 260 379 0 0 chrX 29107587 29107703 -137542593 - RMER1C Other Other -690 652 537 9 807 225 442 0 0 chrX 29108026 29108164 -137542132 - RMER1C Other Other -670 672 535 9 807 233 244 12 25 chrX 29108217 29108297 -137541999 + Lx9 LINE L1 6168 6246 -1398 9 807 441 264 8 23 chrX 29108552 29108684 -137541612 - Lx8 LINE L1 -704 6769 6640 9 807 916 290 47 22 chrX 29108839 29109199 -137541097 - ORR1D2 LTR MaLR -1 369 1 9 807 423 389 4 0 chrX 29109302 29109536 -137540760 - Lx8 LINE L1 -283 7190 6956 9 807 650 322 50 18 chrX 29109538 29109756 -137540540 + ORR1D2 LTR MaLR 1 225 -145 1 807 644 240 57 33 chrX 29109762 29109808 -137540488 + L1_Mur3 LINE L1 2265 2310 -3567 1 807 423 0 0 0 chrX 29109808 29109855 -137540441 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 807 644 240 57 33 chrX 29109855 29110019 -137540277 + L1_Mur3 LINE L1 2311 2478 -3399 1 807 1117 220 37 9 chrX 29110019 29110345 -137539951 + L1_Mur3 LINE L1 3511 3845 -2035 1 807 1351 237 44 2 chrX 29110350 29110760 -137539536 + L1_Mur3 LINE L1 5105 5531 -349 1 807 18171 72 5 20 chrX 29110756 29115070 -137535226 + Lx2B LINE L1 335 5589 -297 1 807 8396 35 0 2 chrX 29115070 29116067 -137534229 + L1Md_T LINE L1 5587 6581 -1 1 807 18171 139 13 29 chrX 29116067 29116665 -137533631 + Lx2B LINE L1 5590 6111 -1352 1 807 24 32 0 0 chrX 29116805 29116836 -137533460 + AT_rich Low_complexity Low_complexity 1 31 0 1 807 320 254 46 0 chrX 29116974 29117101 -137533195 - RLTR1B LTR ERV1 -170 454 260 1 807 504 128 0 92 chrX 29117475 29117595 -137532701 + URR1B DNA MER1_type 117 225 0 1 807 3089 159 66 11 chrX 29117768 29118216 -137532080 - L1_Mur2 LINE L1 -699 5178 4731 1 807 188 35 35 0 chrX 29118216 29118245 -137532051 + (TTA)n Simple_repeat Simple_repeat 1 30 0 1 807 3089 159 66 11 chrX 29118245 29118405 -137531891 - L1_Mur2 LINE L1 -1147 4730 4537 1 807 2052 265 69 15 chrX 29118402 29119014 -137531282 + Lx2B LINE L1 6345 6989 -14 1 807 607 207 9 0 chrX 29119870 29119981 -137530315 + Lx4A LINE L1 6719 6830 -228 1 807 6812 158 26 6 chrX 29119980 29121304 -137528992 + L1_Mus1 LINE L1 4601 5948 -690 1 807 23594 146 13 53 chrX 29121302 29124809 -137525487 + L1_Mm LINE L1 1492 4795 -1088 1 807 7201 83 4 10 chrX 29124809 29125810 -137524486 + L1Md_F2 LINE L1 5588 6582 0 1 807 23594 146 13 53 chrX 29125810 29126858 -137523438 + L1_Mm LINE L1 4796 5867 -16 1 807 16942 51 0 0 chrX 29126862 29129020 -137521276 - L1_Mm LINE L1 -1982 3901 1744 1 807 4378 97 8 6 chrX 29129021 29129644 -137520652 + L1_Mus1 LINE L1 5944 6567 0 1 807 351 0 0 0 chrX 29129764 29129803 -137520493 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 807 452 305 65 13 chrX 29129887 29130040 -137520256 + B3 SINE B2 3 163 -53 1 807 213 284 0 69 chrX 29130049 29130121 -137520175 + B4A SINE B4 87 153 -139 1 807 235 352 22 11 chrX 29130125 29130214 -137520082 + B3 SINE B2 113 202 -14 1 807 264 350 20 10 chrX 29131118 29131219 -137519077 - PB1D10 SINE Alu -15 102 1 1 807 283 279 15 0 chrX 29131155 29131223 -137519073 - B4A SINE B4 -142 150 82 1 807 225 0 0 0 chrX 29131794 29131819 -137518477 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 807 369 0 0 0 chrX 29131819 29131860 -137518436 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 807 195 129 0 0 chrX 29131862 29131893 -137518403 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 807 208 147 0 0 chrX 29132075 29132109 -137518187 + (T)n Simple_repeat Simple_repeat 1 34 0 1 807 25317 147 6 2 chrX 29132540 29137711 -137512585 - L1_Mus3 LINE L1 -4 6634 1445 1 807 321 322 49 8 chrX 29137961 29138083 -137512213 + B1F SINE Alu 20 146 -3 1 807 21 36 0 0 chrX 29138331 29138359 -137511937 + AT_rich Low_complexity Low_complexity 1 28 0 1 807 358 297 0 0 chrX 29138994 29139085 -137511211 + B4 SINE B4 3 93 -199 1 807 296 200 39 26 chrX 29139114 29139191 -137511105 + B4A SINE B4 153 230 -62 1 807 921 127 14 0 chrX 29139192 29139334 -137510962 + B1_Mus1 SINE Alu 4 147 -1 1 807 799 289 39 24 chrX 29139589 29139795 -137510501 + B3 SINE B2 2 210 -6 1 807 248 292 101 28 chrX 29140578 29140687 -137509609 - B1F SINE Alu -32 117 1 1 807 228 333 47 70 chrX 29140687 29140707 -137509589 - ID_B1 SINE B4 -29 195 70 1 807 280 259 95 69 chrX 29140702 29140818 -137509478 - B1F SINE Alu -2 147 29 1 807 366 42 0 0 chrX 29141138 29141186 -137509110 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 807 393 22 0 0 chrX 29141187 29141233 -137509063 + (GA)n Simple_repeat Simple_repeat 2 47 0 1 807 26 88 0 0 chrX 29142397 29142465 -137507831 + AT_rich Low_complexity Low_complexity 1 68 0 1 807 21 0 0 0 chrX 29142508 29142529 -137507767 + AT_rich Low_complexity Low_complexity 1 21 0 1 807 5186 145 19 1 chrX 29142529 29143380 -137506916 - Lx LINE L1 -2 6652 5787 1 807 17275 161 20 38 chrX 29143381 29145336 -137504960 - L1VL2 LINE L1 -1127 4756 2810 1 807 294 87 0 0 chrX 29145336 29145382 -137504914 + (TTA)n Simple_repeat Simple_repeat 2 47 0 1 807 893 127 0 0 chrX 29145392 29145526 -137504770 - B1_Mus2 SINE Alu -13 134 1 1 807 17275 176 38 49 chrX 29145526 29148220 -137502076 - L1VL2 LINE L1 -3075 2808 300 1 807 624 327 97 34 chrX 29148350 29148619 -137501677 - B4A SINE B4 -3 289 4 1 807 900 241 19 0 chrX 29148852 29149059 -137501237 - B3 SINE B2 -5 211 1 1 807 384 252 75 8 chrX 29149205 29149325 -137500971 - B1F SINE Alu -1 148 21 1 807 454 289 0 0 chrX 29149385 29149489 -137500807 - B3 SINE B2 -15 201 98 1 807 4625 131 12 19 chrX 29150331 29151128 -137499168 - YREP_Mm Unknown Unknown -35 1777 986 1 807 342 333 115 39 chrX 29151133 29151367 -137498929 - L2 LINE L2 -1119 2300 2049 1 807 228 86 0 0 chrX 29151463 29151498 -137498798 + (CCA)n Simple_repeat Simple_repeat 1 35 0 1 807 574 320 40 15 chrX 29151544 29151751 -137498545 + B4A SINE B4 83 290 -2 1 807 181 347 52 10 chrX 29151765 29151861 -137498435 - L2 LINE L2 -1394 2025 1926 1 807 231 320 62 37 chrX 29152224 29152386 -137497910 - L2 LINE L2 -1760 1659 1494 1 807 5860 129 6 27 chrX 29153698 29154665 -137495631 - Lx3A LINE L1 -7 6974 6028 1 807 283 303 56 70 chrX 29155129 29155413 -137494883 + RMER17C LTR ERVK 83 362 -48 1 807 800 127 35 21 chrX 29155692 29155837 -137494459 + L1_Mus1 LINE L1 6421 6567 0 1 807 4050 67 0 33 chrX 29155841 29156679 -137493617 - L1Md_A LINE L1 -4124 1759 964 1 807 22860 69 2 2 chrX 29156674 29160409 -137489887 - L1Md_F2 LINE L1 -1 6581 2850 1 807 2683 96 0 2 chrX 29160420 29160815 -137489481 - L1Md_F2 LINE L1 -3513 2370 1977 1 807 3608 167 8 3 chrX 29160813 29161461 -137488835 - L1Md_F2 LINE L1 -5633 1091 441 1 807 234 427 13 37 chrX 29162231 29162530 -137487766 + RMER1C Other Other 426 717 -625 1 807 323 433 30 39 chrX 29163014 29163549 -137486747 + RMER1C Other Other 375 898 -444 1 807 582 385 40 17 chrX 29164053 29164399 -137485897 + RMER1C Other Other 521 874 -468 1 807 289 375 47 34 chrX 29164627 29164952 -137485344 + RMER1C Other Other 414 737 -605 1 807 399 433 38 23 chrX 29165341 29165875 -137484421 + RMER1C Other Other 378 833 -509 1 807 362 383 46 10 chrX 29166005 29166200 -137484096 + RMER1C Other Other 462 663 -679 1 807 31308 39 0 0 chrX 29167020 29171882 -137478414 - L1Md_Gf LINE L1 -832 5054 95 1 807 3578 8 0 0 chrX 29171882 29172260 -137478036 + L1Md_T LINE L1 6205 6582 0 1 807 262 411 20 13 chrX 29172271 29172424 -137477872 + RMER1C Other Other 498 651 -691 1 807 414 0 0 0 chrX 29172639 29172685 -137477611 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 807 262 435 9 26 chrX 29173123 29173354 -137476942 + RMER1C Other Other 535 761 -581 1 807 368 401 26 19 chrX 29173561 29173825 -137476471 + RMER1C Other Other 464 729 -613 1 807 21 0 0 0 chrX 29173929 29173950 -137476346 + AT_rich Low_complexity Low_complexity 1 21 0 1 807 342 424 43 10 chrX 29174041 29174341 -137475955 + RMER1C Other Other 510 819 -523 1 807 398 373 54 54 chrX 29174436 29175217 -137475079 + RMER1C Other Other 362 884 -458 1 807 10717 182 33 10 chrX 29175320 29178298 -137471998 - Lx4A LINE L1 -279 6779 3725 1 807 3452 173 49 10 chrX 29178310 29179243 -137471053 + Lx3C LINE L1 5353 6316 -660 1 807 1523 208 16 3 chrX 29179245 29179559 -137470737 - Lx2 LINE L1 -857 6140 5823 1 807 17956 193 11 60 chrX 29179572 29185399 -137464897 - L1_Mus1 LINE L1 0 6567 1071 1 807 2096 206 23 0 chrX 29185396 29185866 -137464430 - L1Md_F LINE L1 -5411 1108 628 1 807 505 255 18 36 chrX 29185847 29186014 -137464282 - L1Md_F LINE L1 -5790 729 566 1 807 607 289 15 116 chrX 29186062 29186520 -137463776 - L1VL1 LINE L1 -6030 392 48 1 807 764 188 69 16 chrX 29186557 29186746 -137463550 - Lx2 LINE L1 -433 5450 5252 1 807 886 283 10 0 chrX 29186889 29187094 -137463202 + B3 SINE B2 1 207 -9 1 807 309 51 0 0 chrX 29187178 29187217 -137463079 + (TTCC)n Simple_repeat Simple_repeat 4 42 0 1 807 590 283 34 73 chrX 29187285 29187491 -137462805 - B3A SINE B2 0 198 1 1 807 699 265 49 35 chrX 29187793 29188078 -137462218 + Lx7 LINE L1 5857 6145 -1551 1 807 2007 262 50 21 chrX 29188104 29188681 -137461615 + Lx7 LINE L1 6061 6654 -1042 1 807 514 133 0 0 chrX 29188945 29189033 -137461263 + RMER3D-int LTR ERVK 489 564 -2278 1 807 571 225 35 40 chrX 29189048 29189247 -137461049 + RMER3D-int LTR ERVK 652 849 -1993 1 807 620 233 30 39 chrX 29189333 29189631 -137460665 + RMER3D-int LTR ERVK 354 810 -2032 1 807 491 184 0 63 chrX 29189644 29189835 -137460461 + GA-rich Low_complexity Low_complexity 2 180 0 1 807 2403 185 86 62 chrX 29189857 29190203 -137460093 + RMER3D-int LTR ERVK 1016 1383 -1459 1 807 3579 35 2 0 chrX 29190203 29190598 -137459698 - MTA_Mm LTR MaLR 0 396 1 1 807 2403 186 90 81 chrX 29190598 29190933 -137459363 + RMER3D-int LTR ERVK 1384 1678 -1164 1 807 2746 228 46 52 chrX 29190956 29191877 -137458419 + RMER3D-int LTR ERVK 1927 2841 -1 1 807 3031 98 7 7 chrX 29191878 29192299 -137457997 + BGLII LTR ERVK 1 421 0 1 807 1218 214 70 60 chrX 29192569 29192972 -137457324 - RLTR21 LTR ERVK -460 1112 706 1 807 12166 86 5 1 chrX 29192973 29195311 -137454985 - L1Md_F2 LINE L1 -12 6570 4225 1 807 9735 116 129 6 chrX 29195293 29196287 -137454009 - L1Md_A LINE L1 -750 3164 1961 1 807 211 71 48 0 chrX 29196287 29196329 -137453967 + (TTG)n Simple_repeat Simple_repeat 2 45 0 1 807 9735 153 69 19 chrX 29196329 29197872 -137452424 - L1Md_A LINE L1 -1954 1960 446 1 807 674 184 17 51 chrX 29197875 29198052 -137452244 - RLTR21 LTR ERVK -855 717 547 1 807 198 0 0 0 chrX 29198060 29198082 -137452214 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1 807 1489 215 24 40 chrX 29198099 29198428 -137451868 - RLTR21 LTR ERVK -1248 324 1 1 807 262 307 0 17 chrX 29198824 29198940 -137451356 - Lx6 LINE L1 -15 7445 7332 1 807 462 317 26 18 chrX 29198940 29199168 -137451128 - Lx6 LINE L1 -1326 6134 5905 1 807 2074 201 17 15 chrX 29199174 29199583 -137450713 - MTC LTR MaLR 0 421 12 1 807 1286 222 14 21 chrX 29199593 29199883 -137450413 - Lx7 LINE L1 -1792 5904 5617 1 807 1155 203 28 3 chrX 29199898 29200180 -137450116 - L1_Mur3 LINE L1 -2593 3287 2999 1 807 3861 153 18 23 chrX 29200181 29200712 -137449584 - L1_Mus3 LINE L1 -8 6630 6101 1 807 2888 67 0 3 chrX 29200712 29201055 -137449241 - ORR1A1 LTR MaLR -4 342 1 1 807 3861 153 18 23 chrX 29201055 29201179 -137449117 - L1_Mus3 LINE L1 -538 6100 5978 1 807 2506 58 3 3 chrX 29201180 29201493 -137448803 + L1Md_F2 LINE L1 5274 5586 -297 1 807 7666 78 6 14 chrX 29201494 29202495 -137447801 + L1Md_F2 LINE L1 5588 6580 -2 1 807 1386 309 37 43 chrX 29202507 29203047 -137447249 - RodERV21-int LTR ERV1 -3339 1652 1116 1 807 209 169 49 33 chrX 29204366 29204427 -137445869 + GA-rich Low_complexity Low_complexity 2 63 0 1 807 487 227 25 62 chrX 29204592 29204752 -137445544 - L1_Rod LINE L1 -313 5534 5381 1 807 2224 207 69 32 chrX 29204752 29205306 -137444990 + RLTR31A_Mm LTR ERVK 11 584 0 2 807 268 196 107 10 chrX 29205306 29205409 -137444887 - L1_Rod LINE L1 -475 5372 5260 1 807 853 145 13 46 chrX 29205552 29205704 -137444592 - B1_Mus1 SINE Alu 0 148 2 2 807 295 260 30 30 chrX 29205948 29206047 -137444249 - RMER17C-int LTR ERVK -2 3236 3138 2 807 3639 319 41 47 chrX 29206115 29206406 -137443890 - RodERV21-int LTR ERV1 -198 4793 4501 2 807 2619 126 35 54 chrX 29206406 29206834 -137443462 - RLTR9B2 LTR ERVK 0 420 1 2 807 3639 319 41 47 chrX 29206834 29208443 -137441853 - RodERV21-int LTR ERV1 -491 4500 2905 2 807 3561 76 20 16 chrX 29208558 29209052 -137441244 + LTRIS2 LTR ERV1 69 564 0 2 807 724 75 0 0 chrX 29209279 29209372 -137440924 + RLTR1B-int LTR ERV1 201 293 -3006 2 807 966 126 90 17 chrX 29209716 29209894 -137440402 + RMER16-int LTR ERVK 141 331 -5075 2 807 4133 153 52 18 chrX 29209880 29210585 -137439711 + RMER16-int LTR ERVK 690 1418 -3988 2 807 2616 202 115 43 chrX 29210589 29211482 -137438814 + RLTR1B-int LTR ERV1 835 1793 -3270 2 807 183 42 0 0 chrX 29211482 29211506 -137438790 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 807 5255 83 156 91 chrX 29211506 29212748 -137437548 + RLTR1B-int LTR ERV1 1256 2555 -744 2 807 1126 150 58 5 chrX 29212735 29212996 -137437300 + RLTR1B-int LTR ERV1 2669 2813 -486 2 807 1082 171 54 25 chrX 29213222 29213462 -137436834 + RLTR1B-int LTR ERV1 4791 5037 -26 2 807 3676 62 20 12 chrX 29213462 29213954 -137436342 + LTRIS2 LTR ERV1 69 564 0 2 807 1180 273 3 7 chrX 29214428 29214738 -137435558 - MuRRS4-int LTR ERV1 -118 4945 4637 2 807 755 196 0 7 chrX 29214738 29214887 -137435409 - MuRRS4-int LTR ERV1 -128 4935 4788 2 807 5251 154 59 33 chrX 29214878 29217185 -137433111 - MuRRS4-int LTR ERV1 -792 4271 1104 2 807 1471 272 33 7 chrX 29217207 29217629 -137432667 - MuRRS4-int LTR ERV1 -3619 1444 1012 2 807 753 192 0 79 chrX 29217871 29218035 -137432261 + LSU-rRNA_Hsa rRNA rRNA 3514 3664 -1371 2 807 622 145 92 17 chrX 29218035 29218154 -137432142 - MuRRS4-int LTR ERV1 -4186 877 750 2 807 337 172 80 34 chrX 29218138 29218256 -137432040 - RMER16-int LTR ERVK -3958 1448 1386 2 807 4347 128 25 10 chrX 29218344 29219030 -137431266 - RMER16-int LTR ERVK -4045 1361 666 2 807 1201 240 66 22 chrX 29219059 29219379 -137430917 - MuRRS4-int LTR ERV1 -4388 675 342 2 807 643 245 51 77 chrX 29219714 29220265 -137430031 - MuRRS4-int LTR ERV1 -4565 498 5 2 807 653 231 96 29 chrX 29220267 29220476 -137429820 - LTRIS4 LTR ERV1 0 507 285 2 807 341 22 22 0 chrX 29221141 29221187 -137429109 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 807 498 347 27 42 chrX 29221347 29221825 -137428471 - RodERV21-int LTR ERV1 -3035 4056 3586 2 807 1348 284 14 49 chrX 29221950 29222380 -137427916 - RodERV21-int LTR ERV1 -2273 2718 2304 2 807 4192 110 24 0 chrX 29222385 29223049 -137427247 - L1_Mus3 LINE L1 -247 6391 5712 2 807 1432 137 0 0 chrX 29223051 29223277 -137427019 + L1_Mus3 LINE L1 5473 5698 -185 2 807 1650 193 12 21 chrX 29223277 29223605 -137426691 - RLTR14 LTR ERV1 -51 331 7 2 807 8062 189 105 26 chrX 29223630 29225593 -137424703 - RLTR14-int LTR ERV1 -5 5312 3195 2 807 1080 173 190 48 chrX 29225593 29225951 -137424345 + RLTR9E LTR ERVK 1 409 0 2 807 650 214 11 44 chrX 29225953 29226187 -137424109 + ETnERV2-int LTR ERVK 2 294 -3020 2 807 320 146 0 18 chrX 29226271 29226327 -137423969 + ETnERV2-int LTR ERVK 1074 1128 -6278 2 807 268 167 0 0 chrX 29226762 29226816 -137423480 + RMER16-int LTR ERVK 141 194 -5212 2 807 627 14 0 0 chrX 29226819 29226891 -137423405 + (TTC)n Simple_repeat Simple_repeat 2 73 0 2 807 1740 175 65 12 chrX 29226898 29227314 -137422982 + ETnERV2-int LTR ERVK 1648 2085 -5321 2 807 2597 175 38 30 chrX 29227338 29227992 -137422304 + ETnERV2-int LTR ERVK 1934 3135 -4271 2 100 7192 74 1 9 chrX 29227993 29229058 -137421238 - L1Md_F2 LINE L1 -14 6568 5513 2 808 758 149 39 55 chrX 29229058 29229239 -137421057 + ETnERV2-int LTR ERVK 2040 2190 -2654 2 808 3552 130 47 3 chrX 29229464 29230082 -137420214 + ETnERV2-int LTR ERVK 3441 4085 -3321 2 808 698 231 148 10 chrX 29230071 29230381 -137419915 + ETnERV2-int LTR ERVK 4597 4949 -2295 2 808 31761 89 4 18 chrX 29230408 29236753 -137413543 - L1Md_F2 LINE L1 -12 6570 315 2 808 6589 88 1 6 chrX 29236754 29237690 -137412606 - L1Md_F LINE L1 -5494 1025 95 2 808 379 152 0 6 chrX 29237758 29237850 -137412446 + MMETn-int LTR ERVK 2473 2553 -2291 2 808 4725 55 10 7 chrX 29237851 29238454 -137411842 + L1Md_F2 LINE L1 5966 6570 -12 2 808 313 81 32 0 chrX 29238466 29238528 -137411768 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 2 808 2884 181 13 40 chrX 29238528 29239447 -137410849 + MMETn-int LTR ERVK 2541 3719 -1125 2 808 670 219 0 0 chrX 29239442 29239565 -137410731 + MMETn-int LTR ERVK 6539 6661 -745 2 808 3167 206 44 17 chrX 29239596 29240341 -137409955 - RLTR14-int LTR ERV1 -2117 3200 2436 2 808 1856 217 63 44 chrX 29241784 29242309 -137407987 + RLTR40 LTR ERVK 22 556 -261 2 808 398 161 11 0 chrX 29242309 29242402 -137407894 + GA-rich Low_complexity Low_complexity 2 95 0 2 808 503 291 73 53 chrX 29242402 29242586 -137407710 + RLTR40 LTR ERVK 566 752 -65 2 808 6228 95 24 5 chrX 29242586 29243462 -137406834 - RLTR13B1 LTR ERVK 0 893 1 2 808 503 291 73 53 chrX 29243462 29243524 -137406772 + RLTR40 LTR ERVK 753 817 0 2 808 243 0 0 0 chrX 29243715 29243742 -137406554 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2 808 333 0 0 0 chrX 29243742 29243779 -137406517 + (GAA)n Simple_repeat Simple_repeat 2 38 0 2 808 1276 27 0 0 chrX 29244152 29244299 -137405997 + B1_Mus2 SINE Alu 1 147 0 2 808 189 0 0 0 chrX 29244299 29244320 -137405976 + (A)n Simple_repeat Simple_repeat 1 21 0 2 808 645 228 60 11 chrX 29245517 29245699 -137404597 - Lx9 LINE L1 -253 7391 7201 2 808 401 191 0 0 chrX 29245699 29245783 -137404513 + Lx9 LINE L1 7554 7637 -7 2 808 467 293 13 0 chrX 29245792 29245942 -137404354 + Lx5 LINE L1 6825 6976 -74 2 808 387 0 0 0 chrX 29245950 29245993 -137404303 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 2 808 660 208 34 14 chrX 29246008 29246154 -137404142 + B1_Mur3 SINE Alu 1 149 0 2 808 243 0 0 0 chrX 29246154 29246181 -137404115 + (A)n Simple_repeat Simple_repeat 1 27 0 2 808 1935 156 45 0 chrX 29246189 29246542 -137403754 + L1_Mus3 LINE L1 6262 6630 -8 2 808 26 50 0 0 chrX 29246554 29246594 -137403702 + AT_rich Low_complexity Low_complexity 1 40 0 2 808 227 263 0 0 chrX 29246660 29246717 -137403579 + A-rich Low_complexity Low_complexity 4 60 0 2 808 717 256 19 14 chrX 29246725 29246939 -137403357 + Lx4B LINE L1 6809 7023 -35 2 808 2722 174 37 2 chrX 29246975 29247564 -137402732 - L1_Mur2 LINE L1 -1176 4701 4092 2 808 10074 141 39 25 chrX 29247564 29248939 -137401357 - RLTR22_Mur LTR ERVK 0 1848 461 2 808 649 85 0 19 chrX 29248939 29249047 -137401249 + (TAG)n Simple_repeat Simple_repeat 3 108 0 2 808 10074 141 39 25 chrX 29249047 29249494 -137400802 - RLTR22_Mur LTR ERVK -1388 460 3 2 808 1169 194 17 14 chrX 29249494 29249782 -137400514 - L1_Mur2 LINE L1 -1782 4095 3807 2 808 1341 138 29 4 chrX 29249826 29250066 -137400230 + L1_Mus4 LINE L1 6391 6636 0 2 808 8675 22 0 1 chrX 29250098 29251157 -137399139 + L1Md_T LINE L1 4529 5586 -297 2 808 8022 56 0 0 chrX 29251157 29252153 -137398143 + L1Md_T LINE L1 5587 6582 0 2 808 180 0 0 0 chrX 29252523 29252543 -137397753 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 2 808 24 0 0 0 chrX 29253935 29253959 -137396337 + AT_rich Low_complexity Low_complexity 1 24 0 2 808 295 276 22 7 chrX 29254243 29254378 -137395918 + L1_Mur2 LINE L1 4334 4470 -1407 2 808 718 331 43 26 chrX 29254383 29254817 -137395479 + Lx6 LINE L1 6506 7296 -164 2 808 1441 194 20 90 chrX 29254794 29255248 -137395048 - L1_Mur2 LINE L1 -2136 3741 3320 2 808 1159 70 6 0 chrX 29255250 29255407 -137394889 - L1_Mus1 LINE L1 0 6567 6410 2 808 20769 124 6 3 chrX 29255407 29258399 -137391897 - L1_Mus1 LINE L1 -431 6136 3134 2 808 210 37 0 0 chrX 29258399 29258426 -137391870 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 808 20769 136 7 4 chrX 29258426 29259265 -137391031 - L1_Mus1 LINE L1 -2750 3133 2295 2 808 1304 179 52 0 chrX 29259266 29259517 -137390779 + L1VL1 LINE L1 3 266 -6156 2 808 27465 108 16 52 chrX 29259517 29262948 -137387348 + L1Md_F2 LINE L1 277 3463 -2420 2 808 1136 90 73 0 chrX 29262948 29263126 -137387170 + B2_Mm2 SINE B2 5 195 0 2 808 27465 86 7 64 chrX 29263126 29265246 -137385050 + L1Md_F2 LINE L1 3464 5585 -298 2 808 7636 70 1 0 chrX 29265247 29266230 -137384066 + L1Md_F2 LINE L1 5587 6570 -12 2 808 3572 82 13 0 chrX 29266232 29267059 -137383237 + L1Md_Gf LINE L1 828 1762 -4124 2 808 797 127 35 21 chrX 29267063 29267208 -137383088 - L1_Mus1 LINE L1 0 6567 6421 2 808 39116 9 0 1 chrX 29267371 29274155 -137376141 - L1Md_A LINE L1 0 6582 1 2 808 305 307 56 70 chrX 29274309 29274593 -137375703 - RMER17C LTR ERVK -48 362 83 2 808 5252 125 70 32 chrX 29275034 29275968 -137374328 + Lx3A LINE L1 6006 6974 -7 2 808 228 362 28 21 chrX 29277306 29277447 -137372849 + L2 LINE L2 1518 1659 -1760 2 808 543 338 39 7 chrX 29277918 29278073 -137372223 - B4A SINE B4 -2 290 131 2 808 207 114 0 0 chrX 29278170 29278205 -137372091 + (TGG)n Simple_repeat Simple_repeat 1 35 0 2 808 335 332 111 34 chrX 29278301 29278535 -137371761 + L2 LINE L2 2049 2300 -1119 2 808 4650 129 15 18 chrX 29278540 29279334 -137370962 + YREP_Mm Unknown Unknown 986 1777 -35 2 808 455 289 0 0 chrX 29280175 29280279 -137370017 + B3 SINE B2 98 201 -15 2 808 352 269 75 8 chrX 29280339 29280459 -137369837 + B1F SINE Alu 21 148 -1 2 808 964 227 19 0 chrX 29280605 29280812 -137369484 + B3 SINE B2 1 211 -5 2 808 650 319 97 34 chrX 29281045 29281314 -137368982 + B4A SINE B4 4 289 -3 2 808 22 56 0 0 chrX 29281323 29281359 -137368937 + AT_rich Low_complexity Low_complexity 1 36 0 2 808 17010 176 37 59 chrX 29281444 29284147 -137366149 + L1VL2 LINE L1 300 2807 -3076 2 808 942 119 0 0 chrX 29284147 29284281 -137366015 + B1_Mus2 SINE Alu 1 134 -13 2 808 17010 158 19 54 chrX 29284281 29284366 -137365930 + L1VL2 LINE L1 2808 2823 -3060 2 808 660 13 0 0 chrX 29284366 29284443 -137365853 + (TA)n Simple_repeat Simple_repeat 1 77 0 2 808 17010 158 19 54 chrX 29284443 29286379 -137363917 + L1VL2 LINE L1 2824 4756 -1127 2 808 5291 138 19 1 chrX 29286380 29287231 -137363065 + Lx LINE L1 5787 6652 -2 2 808 501 17 0 0 chrX 29288527 29288585 -137361711 + (TC)n Simple_repeat Simple_repeat 2 59 0 2 808 489 17 0 0 chrX 29288586 29288644 -137361652 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 808 269 269 95 69 chrX 29288963 29289079 -137361217 + B1F SINE Alu 29 147 -2 2 808 233 325 47 70 chrX 29289074 29289094 -137361202 + ID_B1 SINE B4 70 195 -29 2 808 263 274 101 28 chrX 29289094 29289203 -137361093 + B1F SINE Alu 1 117 -32 2 808 842 296 14 24 chrX 29289986 29290197 -137360099 - B3 SINE B2 -6 210 2 2 808 1042 91 7 0 chrX 29290453 29290596 -137359700 - B1_Mus1 SINE Alu -1 147 4 2 808 369 256 160 10 chrX 29290597 29290797 -137359499 - B4 SINE B4 -62 230 1 2 808 229 310 127 0 chrX 29291061 29291132 -137359164 - ID4 SINE ID 0 83 4 2 808 210 296 0 0 chrX 29291365 29291409 -137358887 + ID4 SINE ID 4 47 -36 2 808 288 339 49 8 chrX 29291713 29291835 -137358461 - B1F SINE Alu -3 146 20 2 808 25573 144 5 1 chrX 29292086 29297257 -137353039 + L1_Mus3 LINE L1 1445 6634 -4 2 808 201 167 0 0 chrX 29297688 29297724 -137352572 + A-rich Low_complexity Low_complexity 1 36 0 2 808 534 103 0 0 chrX 29297891 29297969 -137352327 + (TATATG)n Simple_repeat Simple_repeat 3 80 0 2 808 264 350 20 10 chrX 29298577 29298678 -137351618 + PB1D10 SINE Alu 1 102 -15 2 808 242 352 22 11 chrX 29299582 29299671 -137350625 - B3 SINE B2 -14 202 113 2 808 225 278 0 65 chrX 29299675 29299752 -137350544 - B4A SINE B4 -139 153 82 2 808 473 293 66 13 chrX 29299756 29299908 -137350388 - B3 SINE B2 -53 163 4 2 808 1846 143 244 30 chrX 29300022 29300489 -137349807 + RLTR6_Mm LTR ERV1 37 603 -51 2 808 26393 34 21 0 chrX 29300491 29303943 -137346353 + RLTR6-int LTR ERV1 2 3602 -4176 2 808 227 159 0 22 chrX 29303943 29303988 -137346308 + LTRIS_Mus LTR ERV1 544 587 0 2 808 387 0 0 0 chrX 29304077 29304120 -137346176 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 808 6862 108 24 17 chrX 29304240 29306015 -137344281 - L1_Mus1 LINE L1 0 6567 4795 3 808 7288 82 5 12 chrX 29306015 29307197 -137343099 - L1Md_F2 LINE L1 0 6582 5405 3 808 18049 153 12 16 chrX 29307195 29310524 -137339772 - L1Md_F2 LINE L1 -1075 4808 1492 3 808 6871 156 27 7 chrX 29310522 29311846 -137338450 - L1_Mus3 LINE L1 -690 5948 4601 3 808 629 189 9 0 chrX 29311845 29311956 -137338340 - Lx4A LINE L1 -228 6830 6719 3 808 2213 258 68 3 chrX 29312809 29313415 -137336881 - Lx2B LINE L1 -14 6986 6342 3 808 3123 156 66 13 chrX 29313412 29313572 -137336724 + L1_Mur2 LINE L1 4537 4730 -1147 3 808 216 0 0 0 chrX 29313572 29313596 -137336700 + (TAA)n Simple_repeat Simple_repeat 1 24 0 3 808 3123 156 66 13 chrX 29313596 29314045 -137336251 + L1_Mur2 LINE L1 4731 5178 -699 3 808 428 150 78 20 chrX 29314218 29314292 -137336004 - URR1B DNA MER1_type 0 225 146 3 808 180 0 0 0 chrX 29314292 29314312 -137335984 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 808 428 150 78 20 chrX 29314312 29314339 -137335957 - URR1B DNA MER1_type -80 145 119 3 808 350 284 71 47 chrX 29314672 29314842 -137335454 + RLTR1B LTR ERV1 166 339 -173 3 808 24 32 0 0 chrX 29314980 29315011 -137335285 + AT_rich Low_complexity Low_complexity 1 31 0 3 808 2988 245 21 15 chrX 29315151 29316145 -137334151 - Lx6 LINE L1 -1352 6108 5105 3 808 1202 217 40 12 chrX 29316150 29316476 -137333820 - Lx6 LINE L1 -2033 3844 3510 3 808 647 267 47 24 chrX 29316476 29316638 -137333658 - Lx6 LINE L1 -3397 2480 2324 3 808 567 0 0 0 chrX 29316638 29316701 -137333595 + (TC)n Simple_repeat Simple_repeat 2 64 0 3 808 647 267 47 24 chrX 29316701 29316749 -137333547 - Lx6 LINE L1 -3554 2323 2266 3 808 631 327 47 14 chrX 29316762 29316973 -137333323 - ORR1D2 LTR MaLR -152 218 1 3 808 507 385 4 0 chrX 29316975 29317209 -137333087 + Lx8 LINE L1 6956 7190 -283 3 808 921 284 35 35 chrX 29317314 29317682 -137332614 + ORR1D2 LTR MaLR 1 368 -2 3 808 504 282 7 21 chrX 29317837 29317982 -137332314 + Lx8 LINE L1 6640 6782 -691 3 808 232 445 7 0 chrX 29318357 29318494 -137331802 + RMER1C Other Other 535 672 -670 3 808 337 411 6 6 chrX 29318818 29318999 -137331297 + RMER1C Other Other 537 717 -625 3 808 288 445 4 0 chrX 29319042 29319271 -137331025 + RMER1C Other Other 412 641 -701 3 808 428 62 24 24 chrX 29319698 29319781 -137330515 + (CAAAA)n Simple_repeat Simple_repeat 3 85 0 3 808 236 350 138 19 chrX 29319900 29320060 -137330236 + RMER1C Other Other 488 666 -676 3 808 304 418 58 47 chrX 29320673 29321118 -137329178 + RMER1C Other Other 420 869 -473 3 808 328 409 40 57 chrX 29321141 29321564 -137328732 + RMER1C Other Other 375 790 -552 3 808 34384 72 2 9 chrX 29321628 29326280 -137324016 - L1Md_F3 LINE L1 0 6584 1973 3 808 180 0 0 0 chrX 29326280 29326300 -137323996 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 808 34384 125 9 27 chrX 29326300 29328067 -137322229 - L1Md_F3 LINE L1 -3911 1972 233 3 808 294 29 0 0 chrX 29329274 29329309 -137320987 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3 808 402 428 25 24 chrX 29329599 29330268 -137320028 + RMER1C Other Other 412 883 -459 3 808 234 382 79 20 chrX 29330408 29330560 -137319736 + RMER1C Other Other 540 700 -642 3 808 542 416 33 41 chrX 29330666 29331196 -137319100 + RMER1C Other Other 412 874 -468 3 808 340 415 35 29 chrX 29331238 29331551 -137318745 + RMER1C Other Other 423 737 -605 3 808 369 0 0 0 chrX 29331667 29331708 -137318588 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 808 357 437 27 15 chrX 29332072 29332607 -137317689 + RMER1C Other Other 378 833 -509 3 808 271 409 32 6 chrX 29332739 29332919 -137317377 + RMER1C Other Other 419 724 -618 3 808 288 390 17 50 chrX 29333748 29333929 -137316367 + RMER1C Other Other 383 651 -691 3 808 273 425 12 32 chrX 29334565 29334910 -137315386 + RMER1C Other Other 509 846 -496 3 808 284 409 26 19 chrX 29335026 29335290 -137315006 + RMER1C Other Other 464 729 -613 3 808 390 419 12 0 chrX 29335569 29335817 -137314479 + RMER1C Other Other 421 671 -671 3 808 226 184 0 58 chrX 29336034 29336086 -137314210 + RMER2 LTR ERV1 285 333 -234 3 808 286 371 71 12 chrX 29336291 29336531 -137313765 + RMER1C Other Other 595 848 -494 3 808 10108 186 29 8 chrX 29336792 29339771 -137310525 - Lx4B LINE L1 -276 6782 3729 3 808 1615 196 9 3 chrX 29339787 29340130 -137310166 + L1_Mur1 LINE L1 5353 5697 -189 3 808 521 197 74 0 chrX 29340118 29340240 -137310056 + Lx3C LINE L1 6293 6423 -553 3 808 932 135 0 0 chrX 29340233 29340389 -137309907 + L1_Mm LINE L1 4206 4361 -1522 3 808 1615 63 13 5 chrX 29340401 29340625 -137309671 - MT2_Mm LTR ERVL 0 493 268 3 808 18247 189 21 70 chrX 29340625 29341117 -137309179 - L1VL1 LINE L1 -145 5741 5239 3 808 504 0 0 0 chrX 29341117 29341173 -137309123 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 808 18247 188 22 68 chrX 29341173 29345616 -137304680 - L1VL1 LINE L1 -648 5238 1071 3 808 2102 202 11 0 chrX 29345613 29346087 -137304209 - L1Md_F LINE L1 -5411 1108 630 3 808 452 238 16 8 chrX 29346098 29346225 -137304071 - L1Md_F LINE L1 -5814 705 578 3 808 507 258 35 139 chrX 29346285 29346734 -137303562 - L1VL1 LINE L1 -6030 608 273 3 808 851 162 62 19 chrX 29346780 29346988 -137303308 - L1_Mm LINE L1 -433 5450 5234 3 808 1101 260 82 0 chrX 29347153 29347445 -137302851 + MER2 DNA MER2_type 6 321 -24 3 808 607 241 69 47 chrX 29347844 29348119 -137302177 + Lx7 LINE L1 5857 6137 -1559 3 808 1775 267 50 19 chrX 29348155 29348731 -137301565 + Lx7 LINE L1 6061 6654 -1042 3 808 445 145 0 0 chrX 29348995 29349083 -137301213 + RMER3D-int LTR ERVK 489 564 -2278 3 808 600 212 25 40 chrX 29349098 29349299 -137300997 + RMER3D-int LTR ERVK 652 849 -1993 3 808 556 179 16 35 chrX 29349385 29349532 -137300764 + RMER3D-int LTR ERVK 650 773 -2069 3 808 361 130 38 25 chrX 29349604 29349683 -137300613 + RMER3D-int LTR ERVK 489 568 -2274 3 808 483 158 11 68 chrX 29349696 29349886 -137300410 + GA-rich Low_complexity Low_complexity 2 180 0 3 808 1920 211 88 78 chrX 29349933 29350253 -137300043 + RMER3D-int LTR ERVK 1016 1383 -1459 3 808 3192 53 5 0 chrX 29350253 29350647 -137299649 - MTA_Mm LTR MaLR 0 396 1 3 808 1920 211 88 78 chrX 29350647 29350982 -137299314 + RMER3D-int LTR ERVK 1384 1678 -1164 3 808 2419 214 119 7 chrX 29351004 29351920 -137298376 + MYSERV16_I-int LTR ERVK 1308 2326 0 3 808 2731 99 19 2 chrX 29351920 29352334 -137297962 + BGLII LTR ERVK 1 421 0 3 808 1325 203 75 44 chrX 29352575 29353004 -137297292 - RLTR21 LTR ERVK -153 1251 706 3 808 31939 58 2 3 chrX 29353004 29358005 -137292291 - L1Md_F2 LINE L1 -12 6570 1568 3 808 459 207 11 0 chrX 29358000 29358087 -137292209 - L1VL1 LINE L1 -6140 282 195 3 12 20400 130 6 6 chrX 29358088 29361930 -137288366 + L1_Mus1 LINE L1 2294 6133 -434 3 809 1156 76 0 0 chrX 29361933 29362091 -137288205 + L1_Mus1 LINE L1 6410 6567 0 3 809 1303 204 20 92 chrX 29362094 29362542 -137287754 + L1_Mur2 LINE L1 3320 3735 -2142 3 809 738 329 42 19 chrX 29362525 29362960 -137287336 - Lx6 LINE L1 -164 7296 6506 3 809 367 261 22 7 chrX 29362965 29363100 -137287196 - L1_Mur2 LINE L1 -1407 4470 4334 3 809 24 0 0 0 chrX 29363385 29363409 -137286887 + AT_rich Low_complexity Low_complexity 1 24 0 3 809 180 0 0 0 chrX 29364802 29364822 -137285474 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 3 809 1375 138 25 4 chrX 29365311 29365552 -137284744 - L1_Mus4 LINE L1 0 6636 6391 3 809 775 162 199 0 chrX 29365596 29365837 -137284459 + L1_Mur2 LINE L1 3807 4095 -1782 3 809 10147 143 34 22 chrX 29365837 29366293 -137284003 + RLTR22_Mur LTR ERVK 1 453 -1395 3 809 484 53 0 26 chrX 29366293 29366371 -137283925 + (CTA)n Simple_repeat Simple_repeat 3 78 0 3 809 10147 143 34 22 chrX 29366371 29367741 -137282555 + RLTR22_Mur LTR ERVK 454 1847 -1 3 809 2685 179 32 2 chrX 29367741 29368333 -137281963 + L1_Mur2 LINE L1 4092 4701 -1176 3 809 691 238 7 12 chrX 29368395 29368580 -137281716 - Lx4B LINE L1 -64 6994 6809 3 809 28 48 0 0 chrX 29368709 29368751 -137281545 + AT_rich Low_complexity Low_complexity 1 42 0 3 809 1977 148 27 0 chrX 29368764 29369102 -137281194 - L1_Mus3 LINE L1 -8 6630 6284 3 809 591 232 35 14 chrX 29369131 29369275 -137281021 - B1_Mur2 SINE Alu -2 147 1 3 809 393 22 0 0 chrX 29369287 29369333 -137280963 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 3 809 473 287 13 0 chrX 29369341 29369491 -137280805 - Lx5 LINE L1 -74 6976 6825 3 809 398 191 0 0 chrX 29369500 29369584 -137280712 - Lx9 LINE L1 -7 7637 7554 3 809 681 232 57 10 chrX 29369584 29369776 -137280520 + Lx9 LINE L1 7201 7401 -243 3 809 356 0 0 22 chrX 29371307 29371352 -137278944 + (TTA)n Simple_repeat Simple_repeat 2 45 0 3 809 636 280 52 44 chrX 29371543 29371605 -137278691 - RLTR40 LTR ERVK 0 817 753 3 809 6224 90 27 16 chrX 29371605 29372488 -137277808 + RLTR13B1 LTR ERVK 1 893 0 3 809 636 280 52 44 chrX 29372488 29372675 -137277621 - RLTR40 LTR ERVK -65 752 566 3 809 521 165 8 0 chrX 29372675 29372796 -137277500 + CT-rich Low_complexity Low_complexity 2 123 0 3 809 1870 233 56 31 chrX 29372798 29373320 -137276976 - RLTR40 LTR ERVK -261 556 22 3 809 2380 203 104 17 chrX 29374777 29375481 -137274815 + RLTR14-int LTR ERV1 2436 3200 -2117 3 809 726 195 0 0 chrX 29375511 29375634 -137274662 - MMETn-int LTR ERVK -745 6661 6539 3 809 2852 177 15 43 chrX 29375629 29376568 -137273728 - MMETn-int LTR ERVK -1703 3141 2541 3 809 4814 63 0 7 chrX 29376568 29377177 -137273119 - L1Md_F2 LINE L1 -12 6570 5966 3 809 631 266 22 124 chrX 29377177 29377270 -137273026 - MMETn-int LTR ERVK -2122 5122 5040 3 809 6496 93 3 6 chrX 29377334 29378268 -137272028 + L1Md_F2 LINE L1 192 1122 -5494 3 809 6165 116 7 50 chrX 29378269 29380196 -137270100 + L1Md_F LINE L1 315 2155 -3728 3 809 276 83 21 0 chrX 29380187 29380235 -137270061 + L1Md_F2 LINE L1 1074 1122 -5494 3 809 31021 80 1 16 chrX 29380236 29385383 -137264913 + L1Md_F2 LINE L1 519 5586 -297 3 809 7599 72 4 0 chrX 29385383 29386375 -137263921 + L1Md_F2 LINE L1 5587 6582 0 3 809 25664 93 2 1 chrX 29386376 29390866 -137259430 + L1Md_F2 LINE L1 1111 5586 -297 3 809 8292 59 1 2 chrX 29390867 29391849 -137258447 + L1Md_F2 LINE L1 5588 6568 -14 3 809 2806 184 34 31 chrX 29391850 29392505 -137257791 - ETnERV2-int LTR ERVK -4283 3123 1934 3 809 2025 181 74 19 chrX 29392526 29392999 -137257297 - ETnERV2-int LTR ERVK -5318 2088 1590 3 809 278 182 0 18 chrX 29393466 29393522 -137256774 - RLTR45-int LTR ERVK -5099 2145 2091 3 809 737 230 17 69 chrX 29393517 29393840 -137256456 - ETnERV2-int LTR ERVK -2942 372 2 3 809 1281 175 187 47 chrX 29393842 29394201 -137256095 - RLTR9E LTR ERVK 0 409 1 3 809 7098 198 43 29 chrX 29394201 29395707 -137254589 + RLTR14-int LTR ERV1 3195 4721 -596 3 809 743 61 0 115 chrX 29395707 29395837 -137254459 + RLTRETN_Mm LTR ERVK 1 115 -207 3 809 40968 27 7 7 chrX 29395863 29403470 -137246826 - L1Md_A LINE L1 -5 6577 1 3 809 1142 160 30 30 chrX 29403496 29403728 -137246568 + RLTRETN_Mm LTR ERVK 91 322 0 3 809 3708 53 0 7 chrX 29403728 29404184 -137246112 + ETnERV-int LTR ERVK 1 453 -2861 3 809 1950 74 4 7 chrX 29404181 29404452 -137245844 + ETnERV-int LTR ERVK 593 862 -3982 3 809 1045 157 39 6 chrX 29404449 29404628 -137245668 + ETnERV-int LTR ERVK 1177 1361 -4045 3 809 441 170 10 96 chrX 29404728 29404832 -137245464 + ETnERV-int LTR ERVK 1354 1448 -3958 3 809 599 130 111 17 chrX 29404816 29404933 -137245363 + MuRRS4-int LTR ERV1 750 877 -4186 3 809 720 270 16 74 chrX 29404933 29405189 -137245107 - LSU-rRNA_Hsa rRNA rRNA -1371 3664 3424 3 809 1477 272 33 7 chrX 29405335 29405757 -137244539 + MuRRS4-int LTR ERV1 1012 1444 -3619 3 809 5240 161 40 37 chrX 29405785 29408092 -137242204 + MuRRS4-int LTR ERV1 1104 4271 -792 3 809 764 164 0 7 chrX 29408097 29408232 -137242064 + MuRRS4-int LTR ERV1 4802 4935 -128 3 809 488 219 0 19 chrX 29408232 29408339 -137241957 + RLTR6-int LTR ERV1 7417 7521 -257 3 809 380 100 0 0 chrX 29408344 29408394 -137241902 + L1Md_T LINE L1 5537 5586 -297 3 809 8781 41 0 1 chrX 29408395 29409391 -137240905 + L1Md_T LINE L1 5588 6582 0 3 809 10187 12 1 0 chrX 29409392 29410530 -137239766 + L1Md_A LINE L1 4448 5586 -297 4 809 8609 43 12 0 chrX 29410530 29411514 -137238782 + L1Md_A LINE L1 5587 6582 0 4 809 231 61 0 0 chrX 29411517 29411550 -137238746 + (A)n Simple_repeat Simple_repeat 1 33 0 4 809 654 293 9 5 chrX 29411550 29411766 -137238530 + MuRRS4-int LTR ERV1 4717 4933 -130 4 809 3466 323 48 53 chrX 29412146 29413955 -137236341 + RodERV21-int LTR ERV1 2702 4500 -491 4 809 2727 118 35 56 chrX 29413955 29414384 -137235912 + RLTR9B2 LTR ERVK 1 420 0 4 809 3466 323 48 53 chrX 29414384 29414675 -137235621 + RodERV21-int LTR ERV1 4501 4793 -198 4 809 253 253 12 37 chrX 29414743 29414825 -137235471 + RMER17C-int LTR ERVK 3138 3217 -21 4 809 814 143 7 73 chrX 29415087 29415238 -137235058 + B1_Mus1 SINE Alu 8 148 0 4 809 277 196 107 10 chrX 29415377 29415480 -137234816 + L1_Rod LINE L1 5260 5372 -475 4 809 2097 205 78 42 chrX 29415480 29416034 -137234262 - RLTR31A_Mm LTR ERVK 0 584 11 4 809 469 228 24 65 chrX 29416034 29416203 -137234093 + L1_Rod LINE L1 5381 5542 -305 4 809 228 179 35 35 chrX 29416362 29416420 -137233876 + CT-rich Low_complexity Low_complexity 2 59 0 4 809 1233 304 44 55 chrX 29417746 29418290 -137232006 + RodERV21-int LTR ERV1 1127 1664 -3327 4 809 355 78 15 15 chrX 29418290 29418355 -137231941 - L1Md_F2 LINE L1 -3 6579 6515 4 809 4576 63 44 5 chrX 29418355 29419128 -137231168 - L1Md_F2 LINE L1 -520 6062 5273 4 809 3970 146 21 24 chrX 29419128 29419252 -137231044 + L1_Mus3 LINE L1 5978 6100 -538 4 809 2908 70 0 0 chrX 29419252 29419594 -137230702 + ORR1A1 LTR MaLR 1 342 -4 4 809 3970 146 21 24 chrX 29419594 29420124 -137230172 + L1_Mus3 LINE L1 6101 6630 -8 4 809 1124 206 25 3 chrX 29420125 29420408 -137229888 + L1_Mur3 LINE L1 2999 3287 -2593 4 809 1748 261 20 30 chrX 29420415 29420712 -137229584 + Lx6 LINE L1 5607 5903 -1557 4 809 2223 196 17 14 chrX 29420712 29421132 -137229164 + MTC LTR MaLR 1 421 0 4 809 1748 261 20 30 chrX 29421132 29421374 -137228922 + Lx6 LINE L1 5904 6141 -1319 4 809 231 286 47 19 chrX 29421366 29421473 -137228823 + Lx6 LINE L1 7332 7441 -19 4 809 1428 220 22 40 chrX 29421872 29422194 -137228102 + RLTR21 LTR ERVK 9 324 -1248 4 809 345 24 0 0 chrX 29422211 29422253 -137228043 + (T)n Simple_repeat Simple_repeat 1 42 0 4 809 838 154 11 51 chrX 29422260 29422438 -137227858 + RLTR21 LTR ERVK 547 717 -855 4 809 13676 113 6 31 chrX 29422441 29425251 -137225045 + L1Md_F2 LINE L1 446 3165 -2718 4 809 10297 82 0 3 chrX 29425234 29426600 -137223696 + L1Md_F2 LINE L1 4225 5586 -297 4 809 7858 73 11 2 chrX 29426600 29427578 -137222718 + L1Md_F2 LINE L1 5587 6573 -9 4 809 1193 218 67 38 chrX 29427578 29428006 -137222290 + RLTR21 LTR ERVK 711 1254 -150 4 809 3067 96 7 2 chrX 29428245 29428664 -137221632 - BGLII LTR ERVK 0 421 1 4 809 3054 202 117 14 chrX 29428664 29429588 -137220708 - MYSERV16_I-int LTR ERVK 0 2326 1308 4 809 586 221 40 33 chrX 29429610 29429760 -137220536 - RMER3D-int LTR ERVK -1164 1678 1528 4 809 1700 193 13 36 chrX 29429788 29429945 -137220351 - RMER3D-int LTR ERVK -1309 1533 1384 4 809 3419 53 2 0 chrX 29429945 29430340 -137219956 + MTA_Mm LTR MaLR 1 396 0 4 809 1700 199 14 33 chrX 29430340 29430685 -137219611 - RMER3D-int LTR ERVK -1459 1383 1014 4 809 547 139 71 24 chrX 29430707 29430877 -137219419 + CT-rich Low_complexity Low_complexity 3 180 0 4 809 548 226 75 38 chrX 29430936 29431275 -137219021 - RMER3D-int LTR ERVK -2036 806 354 4 809 686 212 25 40 chrX 29431341 29431542 -137218754 - RMER3D-int LTR ERVK -1993 849 652 4 809 497 148 0 0 chrX 29431557 29431645 -137218651 - RMER3D-int LTR ERVK -2278 564 489 4 809 2007 259 47 21 chrX 29431909 29432485 -137217811 - Lx7 LINE L1 -1042 6654 6064 4 809 701 270 51 29 chrX 29432520 29432795 -137217501 - Lx7 LINE L1 -1559 6137 5857 4 809 673 257 34 73 chrX 29433097 29433303 -137216993 + B3A SINE B2 1 198 0 4 809 327 25 0 0 chrX 29433372 29433412 -137216884 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 4 809 950 273 10 0 chrX 29433499 29433704 -137216592 - B3 SINE B2 -9 207 1 4 809 1056 267 82 0 chrX 29434124 29434416 -137215880 - MER2 DNA MER2_type -24 321 6 4 809 980 164 62 14 chrX 29434580 29434790 -137215506 + L1_Mm LINE L1 5234 5453 -430 4 809 2289 251 62 55 chrX 29434822 29435951 -137214345 + L1Md_F LINE L1 217 1201 -5437 4 809 26534 132 18 46 chrX 29435954 29440290 -137210006 + L1Md_F LINE L1 1080 5234 -649 4 809 432 0 0 0 chrX 29440290 29440338 -137209958 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 809 26534 131 18 46 chrX 29440338 29440831 -137209465 + L1Md_F LINE L1 5235 5737 -146 4 809 1617 63 13 5 chrX 29440831 29441055 -137209241 + MT2_Mm LTR ERVL 268 493 0 4 809 1036 138 0 0 chrX 29441065 29441225 -137209071 - L1_Mm LINE L1 -1520 4363 4204 4 809 3953 176 52 7 chrX 29441216 29442247 -137208049 - Lx3C LINE L1 -553 6423 5353 4 809 10935 183 30 10 chrX 29442259 29445246 -137205050 + Lx4A LINE L1 3725 6779 -279 4 809 424 401 31 24 chrX 29445578 29446472 -137203824 - RMER1C Other Other -464 878 362 4 809 386 405 26 19 chrX 29446748 29447012 -137203284 - RMER1C Other Other -613 729 464 4 809 342 431 11 27 chrX 29447107 29447472 -137202824 - RMER1C Other Other -475 867 509 4 809 379 419 37 48 chrX 29447944 29448487 -137201809 - RMER1C Other Other -505 837 378 4 809 313 409 55 20 chrX 29449120 29449322 -137200974 - RMER1C Other Other -618 724 419 4 809 447 430 29 17 chrX 29449432 29449971 -137200325 - RMER1C Other Other -509 833 378 4 809 387 0 0 0 chrX 29450331 29450374 -137199922 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 809 589 403 41 34 chrX 29450499 29451299 -137198997 - RMER1C Other Other -460 882 375 4 809 234 389 79 20 chrX 29451488 29451640 -137198656 - RMER1C Other Other -642 700 540 4 809 354 430 27 27 chrX 29451781 29452455 -137197841 - RMER1C Other Other -484 858 444 4 809 249 57 0 0 chrX 29452720 29452755 -137197541 + (T)n Simple_repeat Simple_repeat 1 35 0 4 809 230 405 6 6 chrX 29452823 29452992 -137197304 - RMER1C Other Other -625 717 549 4 809 32456 120 11 26 chrX 29453959 29455718 -137194578 + L1Md_F3 LINE L1 233 1968 -3915 4 809 207 0 0 0 chrX 29455718 29455741 -137194555 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 809 32456 69 2 10 chrX 29455741 29459393 -137190903 + L1Md_F3 LINE L1 1969 5585 -298 4 809 7648 62 11 0 chrX 29459394 29460380 -137189916 + L1Md_F3 LINE L1 5588 6584 0 4 809 340 393 42 48 chrX 29460462 29461128 -137189168 - RMER1C Other Other -461 881 401 4 809 244 338 13 0 chrX 29462029 29462106 -137188190 - RMER1C Other Other -666 676 599 4 809 292 111 0 31 chrX 29462226 29462291 -137188005 + (TTTTG)n Simple_repeat Simple_repeat 3 65 0 4 809 308 444 6 25 chrX 29462718 29463149 -137187147 - RMER1C Other Other -556 786 412 4 809 271 442 0 0 chrX 29463495 29463633 -137186663 - RMER1C Other Other -670 672 535 4 809 253 244 12 25 chrX 29463686 29463766 -137186530 + Lx9 LINE L1 6168 6246 -1398 4 809 472 296 7 21 chrX 29464008 29464153 -137186143 - Lx8 LINE L1 -691 6782 6640 4 809 956 287 47 22 chrX 29464308 29464668 -137185628 - ORR1D2 LTR MaLR -1 369 1 4 809 494 389 4 0 chrX 29464774 29465008 -137185288 - Lx8 LINE L1 -283 7190 6956 4 809 653 322 50 18 chrX 29465010 29465228 -137185068 + ORR1D2 LTR MaLR 1 225 -145 4 809 698 240 57 33 chrX 29465234 29465280 -137185016 + L1_Mur3 LINE L1 2265 2310 -3567 4 809 351 0 0 0 chrX 29465280 29465319 -137184977 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 809 698 240 57 33 chrX 29465319 29465483 -137184813 + L1_Mur3 LINE L1 2311 2478 -3399 4 809 1208 217 37 9 chrX 29465483 29465809 -137184487 + L1_Mur3 LINE L1 3511 3845 -2035 4 809 1460 240 44 2 chrX 29465814 29466224 -137184072 + L1_Mur3 LINE L1 5105 5531 -349 4 809 18143 70 5 19 chrX 29466220 29470531 -137179765 + Lx2B LINE L1 335 5589 -297 4 809 8397 35 0 1 chrX 29470531 29471527 -137178769 + L1Md_T LINE L1 5587 6581 -1 4 809 18143 141 13 29 chrX 29471527 29472125 -137178171 + Lx2B LINE L1 5590 6111 -1352 4 809 24 32 0 0 chrX 29472265 29472296 -137178000 + AT_rich Low_complexity Low_complexity 1 31 0 4 809 314 263 45 0 chrX 29472434 29472561 -137177735 - RLTR1B LTR ERV1 -170 454 259 4 809 472 111 97 39 chrX 29472935 29472963 -137177333 + URR1B DNA MER1_type 117 149 -76 4 809 414 0 0 0 chrX 29472963 29473009 -137177287 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 809 472 111 97 39 chrX 29473009 29473083 -137177213 + URR1B DNA MER1_type 150 225 0 4 809 3091 158 66 13 chrX 29473256 29473705 -137176591 - L1_Mur2 LINE L1 -699 5178 4731 4 809 204 67 0 0 chrX 29473705 29473735 -137176561 + (TTA)n Simple_repeat Simple_repeat 1 30 0 4 809 3091 158 66 13 chrX 29473735 29473895 -137176401 - L1_Mur2 LINE L1 -1147 4730 4537 4 809 2093 262 69 15 chrX 29473892 29474504 -137175792 + Lx2B LINE L1 6345 6989 -14 4 809 607 207 9 0 chrX 29475360 29475471 -137174825 + Lx4A LINE L1 6719 6830 -228 4 809 6775 158 24 8 chrX 29475470 29476795 -137173501 + L1_Mus3 LINE L1 4601 5948 -690 4 809 23483 148 13 53 chrX 29476793 29480302 -137169994 + L1_Mus1 LINE L1 1492 4795 -1088 4 809 7271 80 4 10 chrX 29480302 29481303 -137168993 + L1Md_F2 LINE L1 5588 6582 0 4 809 23483 118 20 38 chrX 29481303 29483071 -137167225 + L1_Mus1 LINE L1 4796 6567 0 4 809 369 0 0 0 chrX 29483191 29483232 -137167064 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 809 452 305 65 13 chrX 29483316 29483469 -137166827 + B3 SINE B2 3 163 -53 4 809 213 284 0 69 chrX 29483478 29483550 -137166746 + B4A SINE B4 87 153 -139 4 809 235 352 22 11 chrX 29483554 29483643 -137166653 + B3 SINE B2 113 202 -14 4 809 264 350 20 10 chrX 29484547 29484648 -137165648 - PB1D10 SINE Alu -15 102 1 4 809 283 279 15 0 chrX 29484584 29484652 -137165644 - B4A SINE B4 -142 150 82 4 809 459 224 0 0 chrX 29485223 29485330 -137164966 + (TA)n Simple_repeat Simple_repeat 1 107 0 4 809 208 147 0 0 chrX 29485508 29485542 -137164754 + (T)n Simple_repeat Simple_repeat 1 34 0 4 809 25377 146 6 2 chrX 29485973 29491144 -137159152 - L1_Mus3 LINE L1 -4 6634 1445 4 810 321 322 49 8 chrX 29491395 29491517 -137158779 + B1F SINE Alu 20 146 -3 4 810 21 36 0 0 chrX 29491765 29491793 -137158503 + AT_rich Low_complexity Low_complexity 1 28 0 4 810 213 319 130 0 chrX 29492091 29492160 -137158136 + ID4 SINE ID 4 81 -2 4 810 358 264 162 10 chrX 29492430 29492628 -137157668 + B4 SINE B4 3 230 -62 4 810 967 113 14 0 chrX 29492629 29492771 -137157525 + B1_Mus1 SINE Alu 4 147 -1 4 810 799 289 39 24 chrX 29493026 29493232 -137157064 + B3 SINE B2 2 210 -6 4 810 247 283 99 45 chrX 29494015 29494126 -137156170 - B1F SINE Alu -32 117 1 4 810 215 333 46 84 chrX 29494126 29494146 -137156150 - ID_B1 SINE B4 -29 195 70 4 810 280 259 95 69 chrX 29494141 29494257 -137156039 - B1F SINE Alu -2 147 29 4 810 453 19 0 0 chrX 29494577 29494631 -137155665 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 810 555 16 0 0 chrX 29494632 29494696 -137155600 + (GA)n Simple_repeat Simple_repeat 2 65 0 4 810 26 88 0 0 chrX 29495863 29495931 -137154365 + AT_rich Low_complexity Low_complexity 1 68 0 4 810 21 0 0 0 chrX 29495974 29495995 -137154301 + AT_rich Low_complexity Low_complexity 1 21 0 4 810 5225 142 19 1 chrX 29495995 29496846 -137153450 - Lx LINE L1 -2 6652 5787 4 810 13824 168 16 45 chrX 29496847 29498804 -137151492 - L1_Mm LINE L1 -1127 4756 2810 4 810 267 93 0 0 chrX 29498804 29498847 -137151449 + (TTA)n Simple_repeat Simple_repeat 2 44 0 5 810 900 127 0 0 chrX 29498857 29498991 -137151305 - B1_Mus2 SINE Alu -13 134 1 5 810 13824 168 16 45 chrX 29498991 29500000 -137150296 - L1_Mm LINE L1 -3075 2808 1866 4 810 4181 155 55 42 chrX 29500000 29501684 -137148612 - L1VL2 LINE L1 -2050 1565 1 1 810 616 327 97 34 chrX 29501814 29502083 -137148213 - B4A SINE B4 -3 289 4 2 810 991 237 19 0 chrX 29502316 29502523 -137147773 - B3 SINE B2 -5 211 1 3 810 375 252 75 8 chrX 29502669 29502789 -137147507 - B1F SINE Alu -1 148 21 4 810 444 289 0 0 chrX 29502849 29502953 -137147343 - B3 SINE B2 -15 201 98 5 810 4570 131 12 19 chrX 29503794 29504591 -137145705 - YREP_Mm Unknown Unknown -35 1777 986 6 810 331 325 115 39 chrX 29504596 29504830 -137145466 - L2 LINE L2 -1119 2300 2049 7 810 255 79 0 0 chrX 29504926 29504964 -137145332 + (CCA)n Simple_repeat Simple_repeat 1 38 0 8 810 583 320 40 15 chrX 29505007 29505214 -137145082 + B4A SINE B4 83 290 -2 9 810 228 320 62 37 chrX 29505687 29505849 -137144447 - L2 LINE L2 -1760 1659 1494 7 810 6195 135 17 27 chrX 29507162 29508151 -137142145 - Lx3A LINE L1 -6 6975 5997 1 810 301 303 56 70 chrX 29508588 29508872 -137141424 + RMER17C LTR ERVK 83 362 -48 1 810 877 120 35 21 chrX 29509151 29509296 -137141000 + L1_Mus1 LINE L1 6421 6567 0 1 810 4127 70 0 33 chrX 29509300 29510138 -137140158 - L1Md_A LINE L1 -4124 1759 964 1 810 23452 68 1 2 chrX 29510139 29513866 -137136430 - L1Md_F2 LINE L1 -12 6570 2850 1 810 2744 96 0 2 chrX 29513877 29514272 -137136024 - L1Md_F2 LINE L1 -3513 2370 1977 1 810 3652 167 8 3 chrX 29514270 29514918 -137135378 - L1Md_F2 LINE L1 -5633 1091 441 1 810 255 435 19 13 chrX 29516657 29516971 -137133325 + RMER1C Other Other 487 802 -540 1 810 535 385 40 17 chrX 29517508 29517854 -137132442 + RMER1C Other Other 521 874 -468 1 810 254 336 33 27 chrX 29518175 29518325 -137131971 + RMER1C Other Other 451 601 -741 1 810 348 395 48 39 chrX 29518783 29519327 -137130969 + RMER1C Other Other 378 864 -478 1 810 338 383 46 10 chrX 29519461 29519656 -137130640 + RMER1C Other Other 462 663 -679 1 810 262 402 42 57 chrX 29520276 29520629 -137129667 + RMER1C Other Other 498 873 -469 2 810 262 435 9 26 chrX 29521288 29521519 -137128777 + RMER1C Other Other 535 761 -581 2 810 368 401 26 19 chrX 29521726 29521990 -137128306 + RMER1C Other Other 464 729 -613 2 810 21 0 0 0 chrX 29522094 29522115 -137128181 + AT_rich Low_complexity Low_complexity 1 21 0 2 810 342 424 43 10 chrX 29522206 29522506 -137127790 + RMER1C Other Other 510 819 -523 2 810 380 376 54 54 chrX 29522601 29523382 -137126914 + RMER1C Other Other 362 884 -458 2 810 2503 215 25 6 chrX 29523462 29523990 -137126306 - Lx4B LINE L1 -257 6801 6264 2 810 1780 191 24 3 chrX 29523992 29524369 -137125927 + L1_Mur2 LINE L1 4352 4736 -1141 2 810 673 221 59 58 chrX 29524664 29525014 -137125282 + RMER3D-int LTR ERVK 488 849 -1993 2 810 538 201 120 34 chrX 29525035 29525210 -137125086 + RMER3D-int LTR ERVK 617 806 -2036 2 810 469 165 13 0 chrX 29525268 29525347 -137124949 + RMER3D-int LTR ERVK 489 568 -2274 3 810 435 180 5 68 chrX 29525360 29525551 -137124745 + GA-rich Low_complexity Low_complexity 2 180 0 3 810 2521 184 87 78 chrX 29525573 29525919 -137124377 + RMER3D-int LTR ERVK 1016 1383 -1459 3 810 3479 46 2 0 chrX 29525919 29526314 -137123982 - MTA_Mm LTR MaLR 0 396 1 3 810 2521 184 88 83 chrX 29526314 29526664 -137123632 + RMER3D-int LTR ERVK 1384 1690 -1152 3 810 2963 213 50 55 chrX 29526635 29527591 -137122705 + RMER3D-int LTR ERVK 1891 2841 -1 3 810 3072 96 7 2 chrX 29527592 29528011 -137122285 + BGLII LTR ERVK 1 421 0 3 810 1249 212 74 50 chrX 29528250 29528681 -137121615 - RLTR21 LTR ERVK -150 1254 706 3 810 12388 121 34 17 chrX 29528682 29533568 -137116728 - L1Md_F2 LINE L1 -12 6570 446 3 810 798 159 22 49 chrX 29533579 29533764 -137116532 - RLTR21 LTR ERVK -846 726 547 3 810 1495 220 18 39 chrX 29533810 29534141 -137116155 - RLTR21 LTR ERVK -1248 324 1 3 810 249 316 0 17 chrX 29534533 29534649 -137115647 - Lx6 LINE L1 -15 7445 7332 3 810 1765 257 20 28 chrX 29534649 29534883 -137115413 - Lx6 LINE L1 -1326 6134 5904 3 810 2202 198 17 14 chrX 29534883 29535303 -137114993 - MTC LTR MaLR 0 421 1 3 810 1765 257 20 28 chrX 29535303 29535577 -137114719 - Lx6 LINE L1 -1557 5903 5630 3 810 1216 192 28 3 chrX 29535606 29535888 -137114408 - L1_Mur3 LINE L1 -2593 3287 2999 3 810 3851 155 20 24 chrX 29535889 29536420 -137113876 - L1_Mus3 LINE L1 -8 6630 6101 3 810 2796 82 0 3 chrX 29536420 29536763 -137113533 - ORR1A1 LTR MaLR -4 342 1 3 810 3851 155 20 24 chrX 29536763 29536887 -137113409 - L1_Mus3 LINE L1 -538 6100 5978 3 810 2293 66 36 3 chrX 29536887 29537191 -137113105 + L1Md_F2 LINE L1 5273 5586 -297 4 810 7812 74 5 10 chrX 29537192 29538190 -137112106 + L1Md_F2 LINE L1 5588 6580 -2 4 810 1324 311 35 39 chrX 29538202 29538743 -137111553 - RodERV21-int LTR ERV1 -3339 1652 1114 4 810 339 269 58 65 chrX 29538882 29539021 -137111275 - RodERV21-int LTR ERV1 -3961 1030 893 4 810 226 297 13 13 chrX 29540060 29540135 -137110161 + GA-rich Low_complexity Low_complexity 3 77 0 4 810 434 245 27 40 chrX 29540286 29540435 -137109861 - L1_Rod LINE L1 -313 5534 5388 4 810 2265 196 70 34 chrX 29540446 29541000 -137109296 + RLTR31A_Mm LTR ERVK 11 584 0 4 810 243 219 104 9 chrX 29541000 29541106 -137109190 - L1_Rod LINE L1 -475 5372 5257 4 810 832 152 13 46 chrX 29541251 29541403 -137108893 - B1_Mus1 SINE Alu 0 148 2 4 810 3714 315 41 47 chrX 29541847 29542138 -137108158 - RodERV21-int LTR ERV1 -198 4793 4501 4 810 2648 121 35 54 chrX 29542138 29542566 -137107730 - RLTR9B2 LTR ERVK 0 420 1 4 810 3714 315 41 47 chrX 29542566 29544174 -137106122 - RodERV21-int LTR ERV1 -491 4500 2905 4 810 3576 74 20 14 chrX 29544289 29544782 -137105514 + LTRIS2 LTR ERV1 69 564 0 4 810 724 117 52 10 chrX 29544931 29545102 -137105194 + RLTR1B-int LTR ERV1 63 293 -3006 4 810 966 126 90 17 chrX 29545446 29545624 -137104672 + RMER16-int LTR ERVK 141 331 -5075 5 810 4153 152 52 18 chrX 29545610 29546315 -137103981 + RMER16-int LTR ERVK 690 1418 -3988 5 810 2648 201 110 45 chrX 29546319 29547218 -137103078 + RLTR1B-int LTR ERV1 835 1797 -3266 4 810 183 42 0 0 chrX 29547218 29547242 -137103054 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 810 5238 87 152 89 chrX 29547242 29548485 -137101811 + RLTR1B-int LTR ERV1 1260 2555 -744 4 810 1126 152 58 5 chrX 29548472 29548733 -137101563 + RLTR1B-int LTR ERV1 2669 2813 -486 4 810 1099 167 54 25 chrX 29548959 29549199 -137101097 + RLTR1B-int LTR ERV1 4791 5037 -26 4 810 3675 62 20 12 chrX 29549199 29549691 -137100605 + LTRIS2 LTR ERV1 69 564 0 5 810 1172 273 3 7 chrX 29550165 29550475 -137099821 - MuRRS4-int LTR ERV1 -118 4945 4637 5 810 755 196 0 7 chrX 29550475 29550624 -137099672 - MuRRS4-int LTR ERV1 -128 4935 4788 5 810 5281 155 59 33 chrX 29550615 29552922 -137097374 - MuRRS4-int LTR ERV1 -792 4271 1104 5 810 1445 277 33 7 chrX 29552944 29553366 -137096930 - MuRRS4-int LTR ERV1 -3619 1444 1012 5 810 688 270 16 78 chrX 29553515 29553772 -137096524 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 5 810 622 145 92 17 chrX 29553772 29553891 -137096405 - MuRRS4-int LTR ERV1 -4186 877 750 5 810 337 172 80 34 chrX 29553875 29553993 -137096303 - RMER16-int LTR ERVK -3958 1448 1386 5 810 4359 129 23 10 chrX 29554081 29554768 -137095528 - RMER16-int LTR ERVK -4045 1361 666 5 810 1250 233 66 22 chrX 29554797 29555117 -137095179 - MuRRS4-int LTR ERV1 -4388 675 342 5 810 691 243 51 77 chrX 29555452 29556003 -137094293 - MuRRS4-int LTR ERV1 -4565 498 5 5 810 636 228 101 34 chrX 29556005 29556214 -137094082 - LTRIS4 LTR ERV1 0 507 285 5 810 305 24 24 0 chrX 29556879 29556921 -137093375 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 6 810 403 338 12 34 chrX 29557233 29557558 -137092738 - RodERV21-int LTR ERV1 -3188 3903 3586 6 810 1220 275 16 51 chrX 29557683 29558113 -137092183 - RodERV21-int LTR ERV1 -2273 2718 2304 6 810 4243 107 24 0 chrX 29558118 29558782 -137091514 - L1_Mus3 LINE L1 -247 6391 5712 6 810 1432 137 0 0 chrX 29558784 29559010 -137091286 + L1_Mus3 LINE L1 5473 5698 -185 6 810 1672 190 12 21 chrX 29559010 29559338 -137090958 - RLTR14 LTR ERV1 -51 331 7 6 810 8053 189 105 28 chrX 29559363 29561330 -137088966 - RLTR14-int LTR ERV1 -5 5312 3195 6 810 1103 170 189 50 chrX 29561330 29561689 -137088607 + RLTR9E LTR ERVK 1 409 0 6 810 650 214 11 44 chrX 29561691 29561925 -137088371 + ETnERV2-int LTR ERVK 2 294 -3020 6 810 320 146 0 18 chrX 29562009 29562065 -137088231 + ETnERV2-int LTR ERVK 1074 1128 -6278 6 810 268 167 0 0 chrX 29562500 29562554 -137087742 + RMER16-int LTR ERVK 141 194 -5212 6 810 762 11 0 0 chrX 29562557 29562644 -137087652 + (TTC)n Simple_repeat Simple_repeat 2 88 0 6 810 1718 178 65 12 chrX 29562651 29563067 -137087229 + ETnERV2-int LTR ERVK 1648 2085 -5321 6 810 2597 175 38 30 chrX 29563091 29563745 -137086551 + ETnERV2-int LTR ERVK 1934 3135 -4271 6 810 7255 71 1 9 chrX 29563746 29564811 -137085485 - L1Md_F2 LINE L1 -14 6568 5513 6 810 758 149 39 55 chrX 29564811 29564992 -137085304 + ETnERV2-int LTR ERVK 2040 2190 -2654 6 810 3526 132 47 3 chrX 29565217 29565835 -137084461 + ETnERV2-int LTR ERVK 3441 4085 -3321 6 810 725 227 148 10 chrX 29565824 29566134 -137084162 + ETnERV2-int LTR ERVK 4597 4949 -2295 6 810 31840 89 4 18 chrX 29566160 29572505 -137077791 - L1Md_F2 LINE L1 -12 6570 315 6 810 6581 89 1 6 chrX 29572506 29573442 -137076854 - L1Md_F LINE L1 -5494 1025 95 6 810 379 152 0 6 chrX 29573510 29573602 -137076694 + MMETn-int LTR ERVK 2473 2553 -2291 7 810 4849 56 0 7 chrX 29573603 29574212 -137076084 + L1Md_F2 LINE L1 5966 6570 -12 7 810 288 138 0 0 chrX 29574223 29574288 -137076008 + (A)n Simple_repeat Simple_repeat 1 65 0 7 810 2909 180 13 40 chrX 29574288 29575207 -137075089 + MMETn-int LTR ERVK 2541 3719 -1125 7 810 692 211 0 0 chrX 29575202 29575325 -137074971 + MMETn-int LTR ERVK 6539 6661 -745 7 810 3175 206 44 17 chrX 29575356 29576103 -137074193 - RLTR14-int LTR ERV1 -2117 3200 2434 7 810 1856 217 63 44 chrX 29577544 29578069 -137072227 + RLTR40 LTR ERVK 22 556 -261 7 810 350 134 15 0 chrX 29578069 29578136 -137072160 + (GA)n Simple_repeat Simple_repeat 2 69 0 7 810 501 286 71 54 chrX 29578154 29578338 -137071958 + RLTR40 LTR ERVK 566 752 -65 7 810 6252 94 24 5 chrX 29578338 29579214 -137071082 - RLTR13B1 LTR ERVK 0 893 1 7 810 501 286 71 54 chrX 29579214 29579269 -137071027 + RLTR40 LTR ERVK 753 809 -8 7 810 252 0 0 0 chrX 29579485 29579513 -137070783 + (GAA)n Simple_repeat Simple_repeat 2 29 0 7 810 1276 27 0 0 chrX 29579886 29580033 -137070263 + B1_Mus2 SINE Alu 1 147 0 7 810 198 0 0 0 chrX 29580033 29580055 -137070241 + (A)n Simple_repeat Simple_repeat 1 22 0 7 810 648 237 57 10 chrX 29581242 29581434 -137068862 - Lx9 LINE L1 -243 7401 7201 8 810 380 202 0 0 chrX 29581434 29581518 -137068778 + Lx9 LINE L1 7554 7637 -7 8 810 488 287 13 0 chrX 29581527 29581677 -137068619 + Lx5 LINE L1 6825 6976 -74 8 810 351 0 0 0 chrX 29581685 29581724 -137068572 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 8 810 660 208 34 14 chrX 29581739 29581885 -137068411 + B1_Mur3 SINE Alu 1 149 0 8 810 360 0 0 0 chrX 29581885 29581925 -137068371 + (A)n Simple_repeat Simple_repeat 1 40 0 8 810 1914 159 45 0 chrX 29581937 29582290 -137068006 + L1_Mus3 LINE L1 6262 6630 -8 8 810 26 50 0 0 chrX 29582302 29582342 -137067954 + AT_rich Low_complexity Low_complexity 1 40 0 8 810 231 271 0 0 chrX 29582408 29582467 -137067829 + A-rich Low_complexity Low_complexity 4 62 0 8 810 717 256 19 14 chrX 29582475 29582689 -137067607 + Lx4B LINE L1 6809 7023 -35 8 810 2711 175 37 2 chrX 29582725 29583314 -137066982 - L1_Mur2 LINE L1 -1176 4701 4092 9 810 10094 141 39 26 chrX 29583314 29584690 -137065606 - RLTR22_Mur LTR ERVK 0 1848 461 9 810 670 75 0 19 chrX 29584690 29584798 -137065498 + (TAG)n Simple_repeat Simple_repeat 3 108 0 9 810 10094 141 39 26 chrX 29584798 29585245 -137065051 - RLTR22_Mur LTR ERVK -1388 460 3 9 810 1169 194 17 14 chrX 29585245 29585533 -137064763 - L1_Mur2 LINE L1 -1782 4095 3807 9 810 1329 142 29 4 chrX 29585577 29585817 -137064479 + L1_Mus4 LINE L1 6391 6636 0 9 810 8717 21 0 0 chrX 29585849 29586907 -137063389 + L1Md_T LINE L1 4529 5586 -297 9 810 7970 58 0 0 chrX 29586907 29587903 -137062393 + L1Md_T LINE L1 5587 6582 0 9 810 180 0 0 0 chrX 29588271 29588291 -137062005 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 9 810 24 0 0 0 chrX 29589682 29589706 -137060590 + AT_rich Low_complexity Low_complexity 1 24 0 9 810 268 284 22 7 chrX 29589990 29590125 -137060171 + L1_Mur2 LINE L1 4334 4470 -1407 9 810 718 331 43 26 chrX 29590130 29590564 -137059732 + Lx6 LINE L1 6506 7296 -164 9 810 1415 199 20 82 chrX 29590541 29590991 -137059305 - L1_Mur2 LINE L1 -2136 3741 3320 9 810 1160 109 17 0 chrX 29590992 29591167 -137059129 - L1_Mus1 LINE L1 0 6567 6390 9 810 30771 100 6 19 chrX 29591168 29597144 -137053152 - L1_Mus1 LINE L1 -449 6118 233 9 811 386 405 26 19 chrX 29649144 29649408 -137000888 + RMER1C Other Other 464 729 -613 1 811 440 423 12 0 chrX 29649684 29649932 -137000364 + RMER1C Other Other 421 671 -671 1 811 432 378 38 23 chrX 29650027 29650578 -136999718 + RMER1C Other Other 362 865 -477 1 811 24972 44 0 0 chrX 29650648 29653763 -136996533 - L1_Mm LINE L1 -1059 4824 1710 1 811 10501 184 30 12 chrX 29653763 29656609 -136993687 - Lx4A LINE L1 -427 6631 3725 1 811 3931 177 50 5 chrX 29656621 29657653 -136992643 + Lx3C LINE L1 5353 6423 -553 1 811 977 139 0 0 chrX 29657646 29657804 -136992492 + L1_Mm LINE L1 4206 4363 -1520 1 811 1581 67 13 5 chrX 29657814 29658038 -136992258 - MT2_Mm LTR ERVL 0 493 268 1 811 25031 134 15 70 chrX 29658038 29658530 -136991766 - L1Md_F LINE L1 -145 5738 5245 1 811 252 0 0 0 chrX 29658530 29658558 -136991738 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 811 25031 162 28 97 chrX 29658558 29664144 -136986152 - L1Md_F LINE L1 -639 5244 273 1 811 914 162 62 19 chrX 29664190 29664398 -136985898 - L1_Mm LINE L1 -433 5450 5234 1 811 1092 264 82 0 chrX 29664563 29664855 -136985441 + MER2 DNA MER2_type 6 321 -24 1 811 673 244 69 47 chrX 29665254 29665529 -136984767 + Lx7 LINE L1 5857 6137 -1559 1 811 1947 266 62 19 chrX 29665565 29666148 -136984148 + Lx7 LINE L1 6061 6668 -1028 1 811 471 145 0 0 chrX 29666405 29666493 -136983803 + RMER3D-int LTR ERVK 489 564 -2278 1 811 638 218 25 40 chrX 29666508 29666709 -136983587 + RMER3D-int LTR ERVK 652 849 -1993 1 811 573 217 39 43 chrX 29666795 29667093 -136983203 + RMER3D-int LTR ERVK 354 773 -2069 1 811 483 158 11 68 chrX 29667106 29667296 -136983000 + GA-rich Low_complexity Low_complexity 2 180 0 1 811 1920 211 88 78 chrX 29667343 29667663 -136982633 + RMER3D-int LTR ERVK 1016 1383 -1459 1 811 3192 53 5 0 chrX 29667663 29668057 -136982239 - MTA_Mm LTR MaLR 0 396 1 1 811 1920 211 88 78 chrX 29668057 29668392 -136981904 + RMER3D-int LTR ERVK 1384 1678 -1164 1 811 2419 214 119 7 chrX 29668414 29669330 -136980966 + MYSERV16_I-int LTR ERVK 1308 2326 0 1 811 2731 99 19 2 chrX 29669330 29669744 -136980552 + BGLII LTR ERVK 1 421 0 1 811 1344 201 75 44 chrX 29669985 29670414 -136979882 - RLTR21 LTR ERVK -153 1251 706 1 811 31942 58 2 3 chrX 29670414 29675416 -136974880 - L1Md_F2 LINE L1 -12 6570 1568 1 811 459 207 11 0 chrX 29675411 29675498 -136974798 - L1VL1 LINE L1 -6140 282 195 1 811 20402 130 6 6 chrX 29675499 29679341 -136970955 + L1_Mus1 LINE L1 2294 6133 -434 1 811 1156 76 0 0 chrX 29679344 29679502 -136970794 + L1_Mus1 LINE L1 6410 6567 0 1 811 1303 204 20 92 chrX 29679504 29679952 -136970344 + L1_Mur2 LINE L1 3320 3735 -2142 1 811 762 329 42 19 chrX 29679935 29680370 -136969926 - Lx6 LINE L1 -164 7296 6506 1 811 367 261 22 7 chrX 29680375 29680510 -136969786 - L1_Mur2 LINE L1 -1407 4470 4334 1 811 24 0 0 0 chrX 29680795 29680819 -136969477 + AT_rich Low_complexity Low_complexity 1 24 0 1 811 180 0 0 0 chrX 29682212 29682232 -136968064 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 1 811 1354 142 25 4 chrX 29682721 29682962 -136967334 - L1_Mus4 LINE L1 0 6636 6391 1 811 795 158 199 0 chrX 29683006 29683247 -136967049 + L1_Mur2 LINE L1 3807 4095 -1782 1 811 10151 143 33 23 chrX 29683247 29683706 -136966590 + RLTR22_Mur LTR ERVK 1 460 -1388 1 811 403 60 0 29 chrX 29683706 29683775 -136966521 + (CTA)n Simple_repeat Simple_repeat 3 69 0 1 811 10151 143 33 23 chrX 29683775 29685145 -136965151 + RLTR22_Mur LTR ERVK 461 1848 0 1 811 2685 179 32 2 chrX 29685145 29685737 -136964559 + L1_Mur2 LINE L1 4092 4701 -1176 1 811 691 238 7 12 chrX 29685799 29685984 -136964312 - Lx4B LINE L1 -64 6994 6809 1 811 208 254 0 0 chrX 29685993 29686048 -136964248 + T-rich Low_complexity Low_complexity 1 55 0 1 811 28 48 0 0 chrX 29686114 29686156 -136964140 + AT_rich Low_complexity Low_complexity 1 42 0 1 811 1977 148 27 0 chrX 29686169 29686507 -136963789 - L1_Mus3 LINE L1 -8 6630 6284 1 811 591 232 35 14 chrX 29686536 29686680 -136963616 - B1_Mur2 SINE Alu -2 147 1 1 811 321 26 0 0 chrX 29686692 29686730 -136963566 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 1 811 473 287 13 0 chrX 29686738 29686888 -136963408 - Lx5 LINE L1 -74 6976 6825 1 811 398 191 0 0 chrX 29686897 29686981 -136963315 - Lx9 LINE L1 -7 7637 7554 1 811 681 232 57 10 chrX 29686981 29687173 -136963123 + Lx9 LINE L1 7201 7401 -243 1 811 275 0 0 28 chrX 29688704 29688740 -136961556 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1 811 636 280 52 44 chrX 29688931 29688993 -136961303 - RLTR40 LTR ERVK 0 817 753 1 811 6161 90 35 2 chrX 29688993 29689444 -136960852 + RLTR13B1 LTR ERVK 1 469 -424 1 811 360 0 0 0 chrX 29689444 29689484 -136960812 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 811 6161 90 35 2 chrX 29689484 29689897 -136960399 + RLTR13B1 LTR ERVK 470 892 -1 1 811 636 280 52 44 chrX 29689897 29690084 -136960212 - RLTR40 LTR ERVK -65 752 566 1 811 425 168 9 0 chrX 29690084 29690191 -136960105 + CT-rich Low_complexity Low_complexity 2 109 0 1 811 1874 229 56 31 chrX 29690193 29690715 -136959581 - RLTR40 LTR ERVK -261 556 22 1 811 3082 206 51 16 chrX 29692170 29692909 -136957387 + RLTR14-int LTR ERV1 2436 3200 -2117 1 811 726 195 0 0 chrX 29692939 29693062 -136957234 - MMETn-int LTR ERVK -745 6661 6539 1 811 2873 176 15 44 chrX 29693057 29694000 -136956296 - MMETn-int LTR ERVK -1703 3141 2541 1 811 4773 64 0 7 chrX 29694000 29694609 -136955687 - L1Md_F2 LINE L1 -12 6570 5966 1 811 646 259 31 141 chrX 29694609 29694702 -136955594 - MMETn-int LTR ERVK -2124 5120 5040 1 811 6461 91 4 6 chrX 29694766 29695699 -136954597 + L1Md_F2 LINE L1 192 1122 -5494 1 811 30975 80 1 16 chrX 29695700 29700847 -136949449 + L1Md_F2 LINE L1 519 5586 -297 1 811 7547 75 4 0 chrX 29700847 29701839 -136948457 + L1Md_F2 LINE L1 5587 6582 0 1 811 29352 92 2 1 chrX 29701839 29706326 -136943970 + L1Md_F2 LINE L1 1115 5586 -297 1 811 7772 59 1 2 chrX 29706327 29707309 -136942987 + L1Md_F2 LINE L1 5588 6568 -14 1 811 2514 183 34 30 chrX 29707310 29707964 -136942332 - ETnERV2-int LTR ERVK -4283 3123 1934 1 811 1730 169 48 17 chrX 29707988 29708434 -136941862 - ETnERV2-int LTR ERVK -5321 2085 1678 1 811 671 230 17 69 chrX 29708975 29709298 -136940998 - ETnERV2-int LTR ERVK -2942 372 2 1 811 1146 175 187 45 chrX 29709300 29709658 -136940638 - RLTR9E LTR ERVK 0 409 1 1 811 6482 199 41 31 chrX 29709658 29709803 -136940493 + RLTR14-int LTR ERV1 3195 3347 -1970 1 811 4414 14 2 0 chrX 29709803 29710295 -136940001 - MT2_Mm LTR ERVL 0 493 1 1 811 6482 199 41 31 chrX 29710295 29711661 -136938635 + RLTR14-int LTR ERV1 3348 4721 -596 1 811 729 61 0 115 chrX 29711661 29711791 -136938505 + RLTRETN_Mm LTR ERVK 1 115 -207 1 811 10540 14 0 0 chrX 29711819 29713764 -136936532 - L1Md_A LINE L1 -5 6577 4633 1 811 1117 315 7 31 chrX 29714940 29715362 -136934934 + RodERV21-int LTR ERV1 1253 1664 -3327 1 811 324 78 15 15 chrX 29715362 29715427 -136934869 - L1Md_F2 LINE L1 -3 6579 6515 1 811 4288 63 40 4 chrX 29715427 29716198 -136934098 - L1Md_F2 LINE L1 -520 6062 5273 1 811 3691 144 21 24 chrX 29716198 29716322 -136933974 + L1_Mus3 LINE L1 5978 6100 -538 1 811 2745 67 0 0 chrX 29716322 29716664 -136933632 + ORR1A1 LTR MaLR 1 342 -4 1 811 3691 144 21 24 chrX 29716664 29717194 -136933102 + L1_Mus3 LINE L1 6101 6630 -8 1 811 1006 206 25 3 chrX 29717195 29717478 -136932818 + L1_Mur3 LINE L1 2999 3287 -2593 1 811 1574 259 21 28 chrX 29717485 29717782 -136932514 + Lx6 LINE L1 5607 5903 -1557 1 811 2039 196 17 14 chrX 29717782 29718202 -136932094 + MTC LTR MaLR 1 421 0 1 811 1574 259 21 28 chrX 29718202 29718436 -136931860 + Lx6 LINE L1 5904 6134 -1326 1 811 1436 220 22 40 chrX 29718942 29719264 -136931032 + RLTR21 LTR ERVK 9 324 -1248 1 811 850 154 11 51 chrX 29719305 29719483 -136930813 + RLTR21 LTR ERVK 547 717 -855 1 811 12692 112 5 34 chrX 29719486 29722306 -136927990 + L1Md_F2 LINE L1 217 3165 -2718 1 811 9559 83 0 4 chrX 29722289 29723656 -136926640 + L1Md_F2 LINE L1 4225 5586 -297 1 811 7338 73 11 2 chrX 29723656 29724631 -136925665 + L1Md_F2 LINE L1 5587 6570 -12 1 811 1301 220 65 34 chrX 29724631 29725061 -136925235 + RLTR21 LTR ERVK 708 1254 -150 1 811 2839 98 7 2 chrX 29725300 29725719 -136924577 - BGLII LTR ERVK 0 421 1 1 811 2623 202 117 14 chrX 29725719 29726643 -136923653 - MYSERV16_I-int LTR ERVK 0 2326 1308 1 811 529 221 40 33 chrX 29726665 29726815 -136923481 - RMER3D-int LTR ERVK -1164 1678 1528 1 811 1523 193 13 36 chrX 29726843 29727000 -136923296 - RMER3D-int LTR ERVK -1309 1533 1384 1 811 3231 51 2 0 chrX 29727000 29727395 -136922901 + MTA_Mm LTR MaLR 1 396 0 1 811 1523 183 165 29 chrX 29727395 29727717 -136922579 - RMER3D-int LTR ERVK -1459 1383 1014 1 811 547 166 76 17 chrX 29727762 29728000 -136922296 + CT-rich Low_complexity Low_complexity 1 251 0 1 811 469 229 72 37 chrX 29728008 29728330 -136921966 - RMER3D-int LTR ERVK -2038 804 354 1 811 597 212 25 40 chrX 29728396 29728597 -136921699 - RMER3D-int LTR ERVK -1993 849 652 1 811 462 148 0 0 chrX 29728612 29728700 -136921596 - RMER3D-int LTR ERVK -2278 564 489 1 811 1832 257 47 21 chrX 29728964 29729540 -136920756 - Lx7 LINE L1 -1042 6654 6064 1 811 602 270 51 29 chrX 29729575 29729850 -136920446 - Lx7 LINE L1 -1559 6137 5857 1 811 590 276 29 68 chrX 29730152 29730358 -136919938 + B3A SINE B2 1 198 0 1 811 327 25 0 0 chrX 29730426 29730466 -136919830 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 1 811 871 273 10 0 chrX 29730552 29730757 -136919539 - B3 SINE B2 -9 207 1 1 811 1077 267 82 0 chrX 29731177 29731469 -136918827 - MER2 DNA MER2_type -24 321 6 1 811 876 156 62 19 chrX 29731634 29731843 -136918453 + L1_Mm LINE L1 5234 5451 -432 1 811 466 298 21 113 chrX 29731889 29732367 -136917929 + L1VL1 LINE L1 217 693 -5941 1 811 424 254 16 8 chrX 29732398 29732525 -136917771 + L1Md_F LINE L1 578 705 -5814 1 811 2091 202 11 0 chrX 29732536 29733006 -136917290 + L1Md_F LINE L1 630 1104 -5415 1 811 24294 131 19 46 chrX 29733009 29737345 -136912951 + L1VL1 LINE L1 1080 5234 -649 1 811 468 0 0 0 chrX 29737345 29737397 -136912899 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 811 24294 131 18 47 chrX 29737397 29737890 -136912406 + L1VL1 LINE L1 5235 5737 -146 1 811 1615 63 13 5 chrX 29737890 29738114 -136912182 + MT2_Mm LTR ERVL 268 493 0 1 811 931 135 0 0 chrX 29738126 29738282 -136912014 - L1_Mm LINE L1 -1522 4361 4206 1 811 3675 176 50 5 chrX 29738275 29739306 -136910990 - Lx3C LINE L1 -553 6423 5353 1 811 10144 184 30 8 chrX 29739318 29742300 -136907996 + Lx4B LINE L1 3725 6782 -276 1 811 286 371 71 12 chrX 29742561 29742801 -136907495 - RMER1C Other Other -494 848 595 1 811 226 184 0 58 chrX 29743006 29743058 -136907238 - RMER2 LTR ERV1 -234 333 285 1 811 390 419 12 0 chrX 29743275 29743523 -136906773 - RMER1C Other Other -671 671 421 1 811 283 409 26 19 chrX 29743801 29744065 -136906231 - RMER1C Other Other -613 729 464 1 811 284 422 12 32 chrX 29744181 29744526 -136905770 - RMER1C Other Other -496 846 509 1 811 288 390 17 50 chrX 29745162 29745343 -136904953 - RMER1C Other Other -691 651 383 1 811 256 433 18 14 chrX 29746716 29746995 -136903301 - RMER1C Other Other -478 864 585 1 811 459 0 0 0 chrX 29747383 29747434 -136902862 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 811 254 328 36 29 chrX 29747550 29747688 -136902608 - RMER1C Other Other -753 589 451 1 811 388 405 41 19 chrX 29747905 29748355 -136901941 - RMER1C Other Other -468 874 412 1 811 299 419 23 17 chrX 29748858 29749205 -136901091 - RMER1C Other Other -507 835 487 1 811 294 29 0 0 chrX 29749793 29749828 -136900468 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1 101 30873 86 5 16 chrX 29751035 29756456 -136893840 + L1Md_F3 LINE L1 233 5586 -297 1 812 7680 68 6 0 chrX 29756456 29757448 -136892848 + L1Md_F3 LINE L1 5587 6584 0 1 812 449 69 11 33 chrX 29759294 29759384 -136890912 + (TTTTG)n Simple_repeat Simple_repeat 3 90 0 1 812 288 372 0 0 chrX 29760143 29760264 -136890032 - RMER1C Other Other -685 657 537 1 812 458 256 8 23 chrX 29761114 29761246 -136889050 - Lx8 LINE L1 -704 6769 6640 1 812 902 284 35 35 chrX 29761401 29761769 -136888527 - ORR1D2 LTR MaLR -2 368 1 1 812 422 389 4 0 chrX 29761872 29762106 -136888190 - Lx8 LINE L1 -283 7190 6956 2 812 630 327 47 14 chrX 29762108 29762319 -136887977 + ORR1D2 LTR MaLR 1 218 -152 2 812 536 277 47 24 chrX 29762332 29762380 -136887916 + Lx6 LINE L1 2265 2322 -3555 2 812 690 13 0 0 chrX 29762380 29762459 -136887837 + (GA)n Simple_repeat Simple_repeat 2 80 0 2 812 536 277 47 24 chrX 29762459 29762621 -136887675 + Lx6 LINE L1 2323 2479 -3398 2 812 1112 217 40 12 chrX 29762621 29762947 -136887349 + Lx6 LINE L1 3510 3844 -2033 2 812 2796 245 21 12 chrX 29762952 29763943 -136886353 + Lx6 LINE L1 5105 6108 -1352 2 812 354 284 71 47 chrX 29764252 29764422 -136885874 - RLTR1B LTR ERV1 -173 339 166 2 812 432 167 68 10 chrX 29764755 29764783 -136885513 + URR1B DNA MER1_type 117 146 -79 2 812 324 0 0 0 chrX 29764783 29764819 -136885477 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 812 432 167 68 10 chrX 29764819 29764893 -136885403 + URR1B DNA MER1_type 147 224 -1 2 812 2895 159 66 13 chrX 29765066 29765515 -136884781 - L1_Mur2 LINE L1 -699 5178 4731 2 812 216 0 0 0 chrX 29765515 29765539 -136884757 + (TTA)n Simple_repeat Simple_repeat 1 24 0 2 812 2895 159 66 13 chrX 29765539 29765699 -136884597 - L1_Mur2 LINE L1 -1147 4730 4537 2 812 2063 255 68 3 chrX 29765696 29766302 -136883994 + Lx2B LINE L1 6342 6986 -14 2 812 589 189 9 0 chrX 29767155 29767266 -136883030 + Lx4A LINE L1 6719 6830 -228 2 812 6194 158 27 28 chrX 29767265 29768624 -136881672 + L1_Mus3 LINE L1 4601 5948 -690 2 812 22338 146 14 54 chrX 29768622 29772127 -136878169 + L1_Mus1 LINE L1 1492 4795 -1088 2 812 7255 80 4 14 chrX 29772127 29773132 -136877164 + L1Md_F2 LINE L1 5588 6582 0 2 812 22338 119 20 35 chrX 29773132 29774896 -136875400 + L1_Mus1 LINE L1 4796 6567 0 2 812 279 0 0 0 chrX 29775016 29775047 -136875249 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 812 1832 140 252 31 chrX 29775136 29775585 -136874711 - RLTR6_Mm LTR ERV1 -70 584 37 2 812 52257 37 23 1 chrX 29775698 29783306 -136866990 - RLTR6-int LTR ERV1 0 7778 2 2 812 1872 146 244 30 chrX 29783308 29783775 -136866521 - RLTR6_Mm LTR ERV1 -51 603 37 2 812 481 293 66 13 chrX 29783889 29784041 -136866255 + B3 SINE B2 4 163 -53 2 812 233 278 0 65 chrX 29784045 29784122 -136866174 + B4A SINE B4 82 153 -139 2 812 238 352 22 11 chrX 29784126 29784215 -136866081 + B3 SINE B2 113 202 -14 2 812 247 357 20 10 chrX 29785119 29785218 -136865078 - PB1D10 SINE Alu -15 102 3 2 812 266 294 15 0 chrX 29785156 29785224 -136865072 - B4A SINE B4 -142 150 82 2 812 204 40 0 0 chrX 29785806 29785831 -136864465 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 812 447 106 0 0 chrX 29785831 29785896 -136864400 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 2 812 210 162 0 0 chrX 29786062 29786099 -136864197 + T-rich Low_complexity Low_complexity 1 37 0 2 812 23964 146 6 2 chrX 29786530 29791701 -136858595 - L1_Mus3 LINE L1 -4 6634 1445 2 812 267 355 49 8 chrX 29791952 29792074 -136858222 + B1F SINE Alu 20 146 -3 2 812 213 296 0 0 chrX 29792378 29792422 -136857874 - ID4 SINE ID -36 47 4 2 812 230 310 127 0 chrX 29792655 29792726 -136857570 + ID4 SINE ID 4 83 0 2 812 371 256 160 10 chrX 29792988 29793188 -136857108 + B4 SINE B4 1 230 -62 2 812 1040 98 7 0 chrX 29793189 29793332 -136856964 + B1_Mus1 SINE Alu 4 147 -1 2 812 864 291 14 24 chrX 29793589 29793800 -136856496 + B3 SINE B2 2 210 -6 2 812 256 292 101 28 chrX 29794583 29794692 -136855604 - B1F SINE Alu -32 117 1 2 812 235 333 47 70 chrX 29794692 29794712 -136855584 - ID_B1 SINE B4 -29 195 70 2 812 283 270 134 60 chrX 29794707 29794841 -136855455 - B1F SINE Alu -2 147 4 2 812 24 0 0 0 chrX 29794841 29794865 -136855431 + AT_rich Low_complexity Low_complexity 1 24 0 2 812 375 23 0 0 chrX 29795143 29795187 -136855109 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 812 483 18 0 0 chrX 29795188 29795244 -136855052 + (GA)n Simple_repeat Simple_repeat 2 57 0 2 812 5274 140 19 1 chrX 29796540 29797391 -136852905 - Lx LINE L1 -2 6652 5787 2 812 15821 159 19 57 chrX 29797392 29799331 -136850965 - L1VL2 LINE L1 -1127 4756 2824 2 812 441 0 0 0 chrX 29799331 29799380 -136850916 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 812 15821 159 19 57 chrX 29799380 29799471 -136850825 - L1VL2 LINE L1 -3060 2823 2808 2 812 955 119 0 0 chrX 29799471 29799605 -136850691 - B1_Mus2 SINE Alu -13 134 1 2 812 15821 176 33 62 chrX 29799605 29802301 -136847995 - L1VL2 LINE L1 -3076 2807 300 2 812 22 56 0 0 chrX 29802394 29802430 -136847866 + AT_rich Low_complexity Low_complexity 1 36 0 2 812 658 319 97 34 chrX 29802439 29802708 -136847588 - B4A SINE B4 -3 289 4 2 812 966 227 19 0 chrX 29802941 29803148 -136847148 - B3 SINE B2 -5 211 1 2 812 352 269 75 8 chrX 29803294 29803414 -136846882 - B1F SINE Alu -1 148 21 2 812 456 289 0 0 chrX 29803474 29803578 -136846718 - B3 SINE B2 -15 201 98 2 812 4630 132 11 18 chrX 29804418 29805215 -136845081 - YREP_Mm Unknown Unknown -35 1777 986 2 812 331 341 111 34 chrX 29805220 29805454 -136844842 - L2 LINE L2 -1119 2300 2049 2 812 207 114 0 0 chrX 29805550 29805585 -136844711 + (CCA)n Simple_repeat Simple_repeat 1 35 0 2 812 549 338 39 7 chrX 29805683 29805838 -136844458 + B4A SINE B4 131 290 -2 2 812 205 364 30 23 chrX 29806109 29806241 -136844055 - L2 LINE L2 -1769 1650 1518 2 812 5129 126 78 32 chrX 29807579 29808506 -136841790 - Lx3A LINE L1 -7 6974 6006 2 812 305 307 56 70 chrX 29808947 29809231 -136841065 + RMER17C LTR ERVK 83 362 -48 2 812 36661 8 0 1 chrX 29809385 29815172 -136835124 + L1Md_A LINE L1 1 5586 -297 2 812 8958 7 0 0 chrX 29815172 29816168 -136834128 + L1Md_A LINE L1 5587 6582 0 2 812 812 120 35 21 chrX 29816339 29816484 -136833812 + L1_Mus1 LINE L1 6421 6567 0 2 812 3572 79 8 30 chrX 29816488 29817315 -136832981 - L1Md_A LINE L1 -4124 1759 964 2 812 29568 81 5 41 chrX 29817316 29820419 -136829877 - L1Md_F2 LINE L1 -12 6570 3464 2 812 1136 90 73 0 chrX 29820419 29820597 -136829699 - B2_Mm2 SINE B2 0 195 5 2 812 29568 107 16 49 chrX 29820597 29824030 -136826266 - L1Md_F2 LINE L1 -2420 3463 273 2 812 1280 183 52 0 chrX 29824028 29824279 -136826017 - L1VL1 LINE L1 -6156 266 3 2 812 20701 135 8 3 chrX 29824280 29825117 -136825179 + L1_Mus1 LINE L1 2294 3132 -2751 2 812 210 37 0 0 chrX 29825117 29825144 -136825152 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 812 20701 124 7 3 chrX 29825144 29828115 -136822181 + L1_Mus1 LINE L1 3133 6118 -449 2 812 1160 109 17 0 chrX 29828116 29828291 -136822005 + L1_Mus1 LINE L1 6390 6567 0 2 812 1426 196 20 82 chrX 29828293 29828743 -136821553 + L1_Mur2 LINE L1 3320 3741 -2136 2 812 718 331 43 26 chrX 29828720 29829154 -136821142 - Lx6 LINE L1 -164 7296 6506 2 812 268 284 22 7 chrX 29829159 29829294 -136821002 - L1_Mur2 LINE L1 -1407 4470 4334 2 812 24 0 0 0 chrX 29829578 29829602 -136820694 + AT_rich Low_complexity Low_complexity 1 24 0 2 812 225 0 0 0 chrX 29830993 29831018 -136819278 + (CTTTG)n Simple_repeat Simple_repeat 3 27 0 2 812 10139 45 21 21 chrX 29831386 29833036 -136817260 - L1Md_T LINE L1 0 6582 4880 2 812 228 167 46 77 chrX 29833036 29833101 -136817195 + RMER20A LTR ERVK 186 248 -268 2 812 10139 45 21 21 chrX 29833101 29833440 -136816856 - L1Md_T LINE L1 0 4879 4529 2 812 1427 142 29 4 chrX 29833472 29833712 -136816584 - L1_Mus4 LINE L1 0 6636 6391 2 812 1297 196 17 14 chrX 29833754 29834044 -136816252 + L1_Mur2 LINE L1 3805 4095 -1782 2 812 9967 141 39 26 chrX 29834044 29834491 -136815805 + RLTR22_Mur LTR ERVK 1 444 -1404 2 812 724 72 0 18 chrX 29834491 29834605 -136815691 + (CTA)n Simple_repeat Simple_repeat 3 114 0 2 812 9967 141 39 26 chrX 29834605 29835981 -136814315 + RLTR22_Mur LTR ERVK 445 1847 -1 2 812 2979 175 37 2 chrX 29835981 29836570 -136813726 + L1_Mur2 LINE L1 4092 4701 -1176 2 812 775 256 19 14 chrX 29836606 29836820 -136813476 - Lx4B LINE L1 -35 7023 6809 2 812 227 263 0 0 chrX 29836829 29836886 -136813410 + T-rich Low_complexity Low_complexity 4 60 0 2 812 26 50 0 0 chrX 29836952 29836992 -136813304 + AT_rich Low_complexity Low_complexity 1 40 0 2 812 2087 156 45 0 chrX 29837004 29837357 -136812939 - L1_Mus3 LINE L1 -8 6630 6262 2 812 252 0 0 0 chrX 29837369 29837397 -136812899 + (T)n Simple_repeat Simple_repeat 1 28 0 2 812 717 208 34 14 chrX 29837397 29837543 -136812753 - B1_Mur3 SINE Alu 0 149 1 2 812 459 0 0 0 chrX 29837558 29837609 -136812687 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 2 812 530 287 13 0 chrX 29837617 29837767 -136812529 - Lx5 LINE L1 -74 6976 6825 2 812 435 191 0 0 chrX 29837776 29837860 -136812436 - Lx9 LINE L1 -7 7637 7554 2 812 720 237 57 10 chrX 29837860 29838052 -136812244 + Lx9 LINE L1 7201 7401 -243 2 812 207 0 0 0 chrX 29839239 29839262 -136811034 + (T)n Simple_repeat Simple_repeat 1 23 0 2 812 1347 27 0 0 chrX 29839262 29839409 -136810887 - B1_Mus2 SINE Alu 0 147 1 2 812 252 0 0 0 chrX 29839782 29839810 -136810486 + (TTC)n Simple_repeat Simple_repeat 2 29 0 2 812 1886 242 53 121 chrX 29840019 29840081 -136810215 - RLTR40 LTR ERVK 0 817 753 2 812 6706 94 24 5 chrX 29840081 29840957 -136809339 + RLTR13B1 LTR ERVK 1 893 0 2 812 1886 242 53 121 chrX 29840957 29841748 -136808548 - RLTR40 LTR ERVK -65 752 22 2 812 3466 206 44 17 chrX 29843191 29843936 -136806360 + RLTR14-int LTR ERV1 2436 3200 -2117 2 812 743 211 0 0 chrX 29843967 29844090 -136806206 - MMETn-int LTR ERVK -745 6661 6539 2 812 3217 170 13 41 chrX 29844085 29845004 -136805292 - MMETn-int LTR ERVK -1703 3141 2541 2 812 276 102 0 0 chrX 29845004 29845053 -136805243 + (T)n Simple_repeat Simple_repeat 1 49 0 2 812 385 200 0 87 chrX 29845054 29845085 -136805211 - MMETn-int LTR ERVK -2267 2577 2555 2 812 5139 58 0 7 chrX 29845085 29845694 -136804602 - L1Md_F2 LINE L1 -12 6570 5966 2 812 385 177 271 0 chrX 29845694 29845790 -136804506 - MMETn-int LTR ERVK -2290 2554 2473 2 812 7028 89 1 7 chrX 29845849 29846791 -136803505 + L1Md_F LINE L1 90 1025 -5494 2 812 31778 97 5 25 chrX 29846792 29852177 -136798119 + L1Md_F2 LINE L1 315 5587 -296 2 812 8380 50 2 5 chrX 29852178 29853163 -136797133 + L1Md_F2 LINE L1 5589 6570 -12 2 812 1050 210 155 16 chrX 29853189 29853499 -136796797 - ETnERV2-int LTR ERVK -2295 4949 4597 2 812 3872 131 47 3 chrX 29853485 29854106 -136796190 - ETnERV2-int LTR ERVK -3318 4088 3441 2 812 841 142 6 105 chrX 29854331 29854512 -136795784 - MMETn-int LTR ERVK -2654 2190 2028 2 812 581 98 0 0 chrX 29854512 29854586 -136795710 + L1_Mm LINE L1 5513 5615 -2170 2 812 8116 68 1 10 chrX 29854586 29855577 -136794719 + L1Md_F2 LINE L1 5587 6568 -14 2 812 298 286 21 21 chrX 29855577 29855595 -136794701 + L1_Mm LINE L1 5616 5633 -2152 2 812 2902 187 40 28 chrX 29855599 29856232 -136794064 - ETnERV2-int LTR ERVK -4271 3135 2496 2 812 1921 181 64 12 chrX 29856253 29856672 -136793624 - ETnERV2-int LTR ERVK -5318 2088 1648 2 812 573 15 0 0 chrX 29856679 29856745 -136793551 + (GAA)n Simple_repeat Simple_repeat 2 67 0 2 812 292 167 0 0 chrX 29856748 29856802 -136793494 - RMER16-int LTR ERVK -5212 194 141 2 812 346 146 0 18 chrX 29857237 29857293 -136793003 - ETnERV2-int LTR ERVK -6278 1128 1074 2 812 759 252 12 106 chrX 29857283 29857612 -136792684 - ETnERV2-int LTR ERVK -4545 299 2 2 812 1243 170 189 50 chrX 29857614 29857973 -136792323 - RLTR9E LTR ERVK 0 409 1 2 812 8871 189 105 26 chrX 29857973 29859937 -136790359 + RLTR14-int LTR ERV1 3195 5312 -5 2 812 1673 190 12 21 chrX 29859962 29860290 -136790006 + RLTR14 LTR ERV1 7 331 -51 2 812 1532 137 0 0 chrX 29860290 29860516 -136789780 - L1_Mus3 LINE L1 -185 5698 5473 2 812 4547 107 24 0 chrX 29860518 29861182 -136789114 + L1_Mus3 LINE L1 5712 6391 -247 2 812 1352 275 16 51 chrX 29861187 29861617 -136788679 + RodERV21-int LTR ERV1 2304 2718 -2273 3 812 498 347 27 42 chrX 29861742 29862220 -136788076 + RodERV21-int LTR ERV1 3586 4056 -3035 3 812 341 22 22 0 chrX 29862379 29862425 -136787871 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 3 812 636 228 101 34 chrX 29863090 29863299 -136786997 + LTRIS4 LTR ERV1 285 507 0 3 812 691 245 51 79 chrX 29863301 29863852 -136786444 + MuRRS4-int LTR ERV1 5 498 -4565 3 812 1250 233 66 22 chrX 29864187 29864507 -136785789 + MuRRS4-int LTR ERV1 342 675 -4388 3 812 4384 129 23 7 chrX 29864536 29865221 -136785075 + RMER16-int LTR ERVK 666 1361 -4045 3 812 337 172 80 34 chrX 29865308 29865426 -136784870 + RMER16-int LTR ERVK 1386 1448 -3958 3 812 622 145 92 17 chrX 29865410 29865529 -136784767 + MuRRS4-int LTR ERV1 750 877 -4186 3 812 711 266 16 78 chrX 29865529 29865786 -136784510 - LSU-rRNA_Hsa rRNA rRNA -1371 3664 3424 3 812 1471 272 33 7 chrX 29865935 29866357 -136783939 + MuRRS4-int LTR ERV1 1012 1444 -3619 3 812 5281 156 64 25 chrX 29866379 29868686 -136781610 + MuRRS4-int LTR ERV1 1104 4271 -792 3 812 755 196 0 7 chrX 29868677 29868826 -136781470 + MuRRS4-int LTR ERV1 4788 4935 -128 3 812 1172 273 3 7 chrX 29868826 29869136 -136781160 + MuRRS4-int LTR ERV1 4637 4945 -118 3 812 3700 60 20 12 chrX 29869610 29870102 -136780194 - LTRIS2 LTR ERV1 0 564 69 3 812 1099 167 54 25 chrX 29870102 29870342 -136779954 - RLTR1B-int LTR ERV1 -26 5037 4791 3 812 1126 153 58 5 chrX 29870568 29870829 -136779467 - RLTR1B-int LTR ERV1 -486 2813 2669 3 812 5220 88 151 88 chrX 29870816 29872058 -136778238 - RLTR1B-int LTR ERV1 -744 2555 1261 3 812 183 42 0 0 chrX 29872058 29872082 -136778214 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 812 2648 198 115 46 chrX 29872082 29872981 -136777315 - RLTR1B-int LTR ERV1 -3265 1798 835 3 812 4153 152 52 18 chrX 29872985 29873690 -136776606 - RMER16-int LTR ERVK -3988 1418 690 3 812 966 126 90 17 chrX 29873676 29873854 -136776442 - RMER16-int LTR ERVK -5075 331 141 3 812 724 117 52 10 chrX 29874198 29874369 -136775927 - RLTR1B-int LTR ERV1 -3006 293 63 3 812 3576 74 20 14 chrX 29874518 29875011 -136775285 - LTRIS2 LTR ERV1 0 564 69 3 812 3714 315 41 47 chrX 29875126 29876734 -136773562 + RodERV21-int LTR ERV1 2905 4500 -491 3 812 2609 126 35 54 chrX 29876734 29877162 -136773134 + RLTR9B2 LTR ERVK 1 420 0 3 812 3714 315 41 47 chrX 29877162 29877453 -136772843 + RodERV21-int LTR ERV1 4501 4793 -198 3 812 832 152 13 46 chrX 29877897 29878049 -136772247 + B1_Mus1 SINE Alu 2 148 0 3 812 243 219 104 9 chrX 29878194 29878300 -136771996 + L1_Rod LINE L1 5257 5372 -475 3 812 2265 196 70 34 chrX 29878300 29878854 -136771442 - RLTR31A_Mm LTR ERVK 0 584 11 3 812 434 245 27 40 chrX 29878865 29879014 -136771282 + L1_Rod LINE L1 5388 5534 -313 3 812 226 297 13 13 chrX 29879165 29879240 -136771056 + CT-rich Low_complexity Low_complexity 3 77 0 3 812 339 269 58 65 chrX 29880279 29880418 -136769878 + RodERV21-int LTR ERV1 893 1030 -3961 3 812 1324 311 35 39 chrX 29880557 29881098 -136769198 + RodERV21-int LTR ERV1 1114 1652 -3339 3 812 7476 74 13 6 chrX 29881110 29882413 -136767883 - L1Md_F2 LINE L1 -2 6580 5273 3 812 3864 153 20 24 chrX 29882413 29882537 -136767759 + L1_Mus3 LINE L1 5978 6100 -538 3 812 2796 82 0 3 chrX 29882537 29882880 -136767416 + ORR1A1 LTR MaLR 1 342 -4 3 812 3864 153 20 24 chrX 29882880 29883411 -136766885 + L1_Mus3 LINE L1 6101 6630 -8 3 812 1216 192 28 3 chrX 29883412 29883694 -136766602 + L1_Mur3 LINE L1 2999 3287 -2593 3 812 1765 257 20 28 chrX 29883723 29883997 -136766299 + Lx6 LINE L1 5630 5903 -1557 3 101 2202 198 17 14 chrX 29883997 29884417 -136765879 + MTC LTR MaLR 1 421 0 3 813 1765 257 20 28 chrX 29884417 29884651 -136765645 + Lx6 LINE L1 5904 6134 -1326 3 813 249 316 0 17 chrX 29884651 29884767 -136765529 + Lx6 LINE L1 7332 7445 -15 3 813 1495 220 18 39 chrX 29885159 29885490 -136764806 + RLTR21 LTR ERVK 1 324 -1248 3 813 798 159 22 49 chrX 29885536 29885721 -136764575 + RLTR21 LTR ERVK 547 726 -846 3 813 7986 128 11 16 chrX 29885732 29887263 -136763033 + L1Md_F2 LINE L1 446 1958 -3925 3 813 238 67 44 0 chrX 29887263 29887308 -136762988 + (CAA)n Simple_repeat Simple_repeat 2 48 0 3 813 7986 156 88 7 chrX 29887308 29888300 -136761996 + L1Md_F2 LINE L1 1959 3160 -2717 3 813 9915 85 2 3 chrX 29888282 29889645 -136760651 + L1Md_F2 LINE L1 4225 5586 -297 3 813 7431 72 9 0 chrX 29889645 29890620 -136759676 + L1Md_F2 LINE L1 5587 6570 -12 3 813 1314 212 74 50 chrX 29890621 29891052 -136759244 + RLTR21 LTR ERVK 706 1254 -150 3 813 2855 96 7 2 chrX 29891291 29891710 -136758586 - BGLII LTR ERVK 0 421 1 3 813 2827 221 45 51 chrX 29891711 29892632 -136757664 - RMER3D-int LTR ERVK -1 2841 1927 3 813 2429 179 89 85 chrX 29892638 29892988 -136757308 - RMER3D-int LTR ERVK -1152 1690 1384 3 813 3222 48 2 0 chrX 29892988 29893383 -136756913 + MTA_Mm LTR MaLR 1 396 0 3 813 2429 179 86 65 chrX 29893383 29893729 -136756567 - RMER3D-int LTR ERVK -1459 1383 1016 3 813 435 180 5 68 chrX 29893751 29893942 -136756354 + CT-rich Low_complexity Low_complexity 2 180 0 3 813 461 165 13 0 chrX 29893955 29894034 -136756262 - RMER3D-int LTR ERVK -2274 568 489 3 813 518 211 52 39 chrX 29894094 29894247 -136756049 - RMER3D-int LTR ERVK -2038 804 650 3 813 641 206 63 31 chrX 29894288 29894534 -136755762 - RMER3D-int LTR ERVK -1993 849 652 3 813 540 124 0 0 chrX 29894549 29894638 -136755658 - RMER3D-int LTR ERVK -2278 564 488 3 813 1916 266 52 22 chrX 29894901 29895478 -136754818 - Lx7 LINE L1 -1042 6654 6061 3 813 680 265 49 35 chrX 29895504 29895789 -136754507 - Lx7 LINE L1 -1551 6145 5857 3 813 648 297 29 68 chrX 29896091 29896297 -136753999 + B3A SINE B2 1 198 0 3 813 345 47 0 0 chrX 29896365 29896408 -136753888 + (GGAA)n Simple_repeat Simple_repeat 4 46 0 3 813 813 283 10 0 chrX 29896492 29896697 -136753599 - B3 SINE B2 -9 207 1 3 813 797 177 69 16 chrX 29896840 29897029 -136753267 + L1_Mm LINE L1 5252 5450 -433 3 813 27197 143 14 52 chrX 29897066 29903894 -136746402 + L1_Mus1 LINE L1 217 6567 0 3 813 1567 195 16 3 chrX 29903907 29904221 -136746075 + Lx2 LINE L1 5823 6140 -857 3 813 3441 173 48 9 chrX 29904223 29905156 -136745140 - Lx3C LINE L1 -660 6316 5353 3 813 10360 185 30 11 chrX 29905163 29908157 -136742139 + Lx4A LINE L1 3720 6779 -279 3 813 435 386 46 51 chrX 29908260 29909076 -136741220 - RMER1C Other Other -458 884 362 3 813 396 423 43 23 chrX 29909136 29909530 -136740766 - RMER1C Other Other -523 819 418 3 813 413 401 26 19 chrX 29909652 29909916 -136740380 - RMER1C Other Other -613 729 464 3 813 286 432 12 43 chrX 29910032 29910354 -136739942 - RMER1C Other Other -496 846 535 3 813 307 403 52 63 chrX 29910829 29911370 -136738926 - RMER1C Other Other -469 873 498 3 813 362 383 46 10 chrX 29911990 29912185 -136738111 - RMER1C Other Other -679 663 462 3 813 404 417 50 32 chrX 29912319 29912959 -136737337 - RMER1C Other Other -461 881 378 3 813 301 386 45 34 chrX 29913239 29913663 -136736633 - RMER1C Other Other -605 737 405 3 813 582 385 40 17 chrX 29913792 29914138 -136736158 - RMER1C Other Other -468 874 521 3 813 306 437 23 18 chrX 29914630 29915177 -136735119 - RMER1C Other Other -470 872 373 3 813 234 427 13 37 chrX 29915661 29915960 -136734336 - RMER1C Other Other -625 717 426 3 813 3608 167 8 3 chrX 29916730 29917378 -136732918 + L1Md_F2 LINE L1 441 1091 -5633 3 813 2683 96 0 2 chrX 29917376 29917771 -136732525 + L1Md_F2 LINE L1 1977 2370 -3513 3 813 20559 72 0 2 chrX 29917782 29920522 -136729774 + L1Md_F2 LINE L1 2850 5585 -298 3 813 7734 63 4 0 chrX 29920523 29921515 -136728781 + L1Md_F2 LINE L1 5587 6582 0 3 813 4024 78 0 0 chrX 29921515 29922348 -136727948 + L1Md_Gf LINE L1 833 1762 -4124 3 813 812 120 35 21 chrX 29922352 29922497 -136727799 - L1_Mus1 LINE L1 0 6567 6421 3 813 283 303 56 70 chrX 29922776 29923060 -136727236 - RMER17C LTR ERVK -48 362 83 3 813 5783 129 12 27 chrX 29923524 29924485 -136725811 + Lx3A LINE L1 6028 6974 -7 3 813 231 320 62 37 chrX 29925798 29925960 -136724336 + L2 LINE L2 1494 1659 -1760 3 813 181 347 52 10 chrX 29926323 29926419 -136723877 + L2 LINE L2 1926 2025 -1394 3 813 574 320 40 15 chrX 29926433 29926640 -136723656 - B4A SINE B4 -2 290 83 3 813 228 86 0 0 chrX 29926686 29926721 -136723575 + (TGG)n Simple_repeat Simple_repeat 1 35 0 3 813 362 320 115 39 chrX 29926817 29927051 -136723245 + L2 LINE L2 2049 2300 -1119 3 813 4643 133 11 18 chrX 29927056 29927853 -136722443 + YREP_Mm Unknown Unknown 986 1777 -35 3 813 454 289 0 0 chrX 29928693 29928797 -136721499 + B3 SINE B2 98 201 -15 3 813 384 252 75 8 chrX 29928857 29928977 -136721319 + B1F SINE Alu 21 148 -1 3 813 912 237 19 0 chrX 29929123 29929330 -136720966 + B3 SINE B2 1 211 -5 3 813 626 327 97 34 chrX 29929563 29929832 -136720464 + B4A SINE B4 4 289 -3 3 813 17412 175 38 49 chrX 29929962 29932655 -136717641 + L1VL2 LINE L1 300 2807 -3076 3 813 925 119 0 0 chrX 29932655 29932789 -136717507 + B1_Mus2 SINE Alu 1 134 -13 3 813 267 93 0 0 chrX 29932799 29932842 -136717454 + (TAA)n Simple_repeat Simple_repeat 2 44 0 3 813 17412 159 20 38 chrX 29932842 29934799 -136715497 + L1VL2 LINE L1 2809 4755 -1128 3 813 5186 145 19 1 chrX 29934800 29935651 -136714645 + Lx LINE L1 5787 6652 -2 3 813 21 0 0 0 chrX 29935651 29935672 -136714624 + AT_rich Low_complexity Low_complexity 1 21 0 3 813 26 88 0 0 chrX 29935715 29935783 -136714513 + AT_rich Low_complexity Low_complexity 1 68 0 3 813 519 17 0 0 chrX 29936950 29937010 -136713286 + (TC)n Simple_repeat Simple_repeat 2 61 0 3 813 489 17 0 0 chrX 29937013 29937071 -136713225 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 813 280 259 95 69 chrX 29937391 29937507 -136712789 + B1F SINE Alu 29 147 -2 3 813 215 333 46 84 chrX 29937502 29937522 -136712774 + ID_B1 SINE B4 70 195 -29 3 813 247 283 99 45 chrX 29937522 29937633 -136712663 + B1F SINE Alu 1 117 -32 3 813 799 289 39 24 chrX 29938416 29938622 -136711674 - B3 SINE B2 -6 210 2 3 813 921 127 14 0 chrX 29938877 29939019 -136711277 - B1_Mus1 SINE Alu -1 147 4 3 813 358 264 162 10 chrX 29939020 29939218 -136711078 - B4 SINE B4 -62 230 3 3 813 213 319 130 0 chrX 29939489 29939558 -136710738 - ID4 SINE ID -2 81 4 3 813 21 36 0 0 chrX 29939856 29939884 -136710412 + AT_rich Low_complexity Low_complexity 1 28 0 3 813 321 322 49 8 chrX 29940132 29940254 -136710042 - B1F SINE Alu -3 146 20 3 813 23859 140 6 2 chrX 29940504 29945675 -136704621 + L1_Mus3 LINE L1 1445 6634 -4 3 813 208 147 0 0 chrX 29946106 29946140 -136704156 + (A)n Simple_repeat Simple_repeat 1 34 0 3 813 549 205 0 0 chrX 29946318 29946435 -136703861 + (TA)n Simple_repeat Simple_repeat 2 118 0 3 813 264 350 20 10 chrX 29947010 29947111 -136703185 + PB1D10 SINE Alu 1 102 -15 3 813 235 352 22 11 chrX 29948015 29948104 -136702192 - B3 SINE B2 -14 202 113 3 813 213 284 0 69 chrX 29948108 29948180 -136702116 - B4A SINE B4 -139 153 87 3 813 452 305 65 13 chrX 29948189 29948342 -136701954 - B3 SINE B2 -53 163 3 3 813 333 0 0 0 chrX 29948426 29948463 -136701833 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 813 6999 103 24 18 chrX 29948583 29950375 -136699921 - L1_Mus1 LINE L1 0 6567 4778 3 813 7353 79 5 8 chrX 29950356 29951534 -136698762 - L1Md_F2 LINE L1 0 6582 5405 3 813 17613 160 11 16 chrX 29951532 29954866 -136695430 - L1_Mus1 LINE L1 -1075 4808 1492 3 813 6719 159 27 10 chrX 29954864 29956194 -136694102 - L1_Mus3 LINE L1 -690 5948 4601 3 813 607 207 9 0 chrX 29956193 29956304 -136693992 - Lx4A LINE L1 -228 6830 6719 3 813 2093 262 69 15 chrX 29957160 29957772 -136692524 - Lx2B LINE L1 -14 6986 6342 3 813 3091 158 66 13 chrX 29957769 29957929 -136692367 + L1_Mur2 LINE L1 4537 4730 -1147 3 813 204 67 0 0 chrX 29957929 29957959 -136692337 + (TAA)n Simple_repeat Simple_repeat 1 30 0 4 813 3091 158 66 13 chrX 29957959 29958408 -136691888 + L1_Mur2 LINE L1 4731 5178 -699 3 813 458 121 97 39 chrX 29958581 29958655 -136691641 - URR1B DNA MER1_type 0 225 150 4 813 558 0 0 0 chrX 29958655 29958717 -136691579 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 813 458 121 97 39 chrX 29958717 29958745 -136691551 - URR1B DNA MER1_type -76 149 117 4 813 314 263 45 0 chrX 29959119 29959246 -136691050 + RLTR1B LTR ERV1 259 454 -170 4 813 24 32 0 0 chrX 29959384 29959415 -136690881 + AT_rich Low_complexity Low_complexity 1 31 0 4 813 1819 235 8 17 chrX 29959555 29960154 -136690142 - Lx6 LINE L1 -1352 6108 5512 4 813 25932 48 150 3 chrX 29960153 29965460 -136684836 - L1Md_T LINE L1 -1 6584 335 4 813 1448 242 44 2 chrX 29965456 29965866 -136684430 - Lx6 LINE L1 -349 5531 5105 4 813 1208 217 37 9 chrX 29965871 29966197 -136684099 - Lx6 LINE L1 -2035 3845 3511 4 813 683 245 57 33 chrX 29966197 29966361 -136683935 - Lx6 LINE L1 -3397 2480 2324 4 813 531 0 0 0 chrX 29966361 29966420 -136683876 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 813 683 245 57 33 chrX 29966420 29966466 -136683830 - Lx6 LINE L1 -3554 2323 2266 4 813 653 322 50 18 chrX 29966472 29966690 -136683606 - ORR1D2 LTR MaLR -145 225 1 4 813 494 389 4 0 chrX 29966692 29966926 -136683370 + Lx8 LINE L1 6956 7190 -283 4 813 956 287 47 22 chrX 29967033 29967393 -136682903 + ORR1D2 LTR MaLR 1 369 -1 4 813 472 296 7 21 chrX 29967548 29967693 -136682603 + Lx8 LINE L1 6640 6782 -691 4 813 253 244 12 25 chrX 29967935 29968015 -136682281 - Lx9 LINE L1 -1398 6246 6168 4 813 271 442 0 0 chrX 29968068 29968206 -136682090 + RMER1C Other Other 535 672 -670 4 813 308 444 6 25 chrX 29968552 29968983 -136681313 + RMER1C Other Other 412 786 -556 4 813 294 162 0 0 chrX 29969403 29969477 -136680819 + A-rich Low_complexity Low_complexity 1 74 0 4 813 244 338 13 0 chrX 29969596 29969673 -136680623 + RMER1C Other Other 599 676 -666 4 813 340 394 43 49 chrX 29970574 29971240 -136679056 + RMER1C Other Other 401 881 -461 4 813 34550 69 4 7 chrX 29971323 29975961 -136674335 - L1Md_F3 LINE L1 0 6584 1970 4 813 207 0 0 0 chrX 29975961 29975984 -136674312 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 813 34550 120 11 26 chrX 29975984 29977743 -136672553 - L1Md_F3 LINE L1 -3914 1969 233 4 813 230 405 6 6 chrX 29978710 29978879 -136671417 + RMER1C Other Other 549 717 -625 4 813 240 59 0 0 chrX 29978947 29978981 -136671315 + (A)n Simple_repeat Simple_repeat 1 34 0 4 813 354 430 27 27 chrX 29979246 29979920 -136670376 + RMER1C Other Other 444 858 -484 4 813 234 389 79 20 chrX 29980061 29980213 -136670083 + RMER1C Other Other 540 700 -642 4 813 589 403 41 34 chrX 29980402 29981202 -136669094 + RMER1C Other Other 375 882 -460 4 813 405 0 0 0 chrX 29981329 29981374 -136668922 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 813 447 430 29 17 chrX 29981734 29982273 -136668023 + RMER1C Other Other 378 833 -509 4 813 296 417 26 1 chrX 29982405 29982585 -136667711 + RMER1C Other Other 419 724 -618 4 813 379 419 37 48 chrX 29983218 29983761 -136666535 + RMER1C Other Other 378 837 -505 4 813 342 431 11 27 chrX 29984233 29984598 -136665698 + RMER1C Other Other 509 867 -475 4 813 386 405 26 19 chrX 29984693 29984957 -136665339 + RMER1C Other Other 464 729 -613 4 813 424 395 35 22 chrX 29985233 29986127 -136664169 + RMER1C Other Other 362 878 -464 4 813 10603 182 30 11 chrX 29986459 29989448 -136660848 - Lx4A LINE L1 -279 6779 3725 4 813 3920 178 50 5 chrX 29989460 29990491 -136659805 + Lx3C LINE L1 5353 6423 -553 4 813 977 139 0 0 chrX 29990484 29990642 -136659654 + L1_Mm LINE L1 4206 4363 -1520 4 813 1604 63 13 5 chrX 29990652 29990876 -136659420 - MT2_Mm LTR ERVL 0 493 268 4 813 25872 131 18 47 chrX 29990876 29991369 -136658927 - L1Md_F LINE L1 -145 5738 5245 4 813 324 0 0 0 chrX 29991369 29991405 -136658891 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 813 25872 163 31 79 chrX 29991405 29996874 -136653422 - L1Md_F LINE L1 -639 5244 217 4 813 947 164 62 14 chrX 29996906 29997116 -136653180 - L1_Mm LINE L1 -430 5453 5234 4 813 1082 267 82 0 chrX 29997280 29997572 -136652724 + MER2 DNA MER2_type 6 321 -24 4 813 874 273 10 0 chrX 29997992 29998197 -136652099 + B3 SINE B2 1 207 -9 4 813 327 25 0 0 chrX 29998282 29998322 -136651974 + (TTCC)n Simple_repeat Simple_repeat 2 41 0 4 813 606 271 29 68 chrX 29998391 29998597 -136651699 - B3A SINE B2 0 198 1 4 813 667 274 51 29 chrX 29998899 29999174 -136651122 + Lx7 LINE L1 5857 6137 -1559 4 813 1987 261 47 21 chrX 29999209 29999785 -136650511 + Lx7 LINE L1 6064 6654 -1042 4 813 486 162 0 0 chrX 30000049 30000137 -136650159 + RMER3D-int LTR ERVK 489 564 -2278 1 813 686 205 88 33 chrX 30000152 30000398 -136649898 + RMER3D-int LTR ERVK 652 849 -1993 2 813 548 226 75 38 chrX 30000419 30000758 -136649538 + RMER3D-int LTR ERVK 354 806 -2036 3 813 547 139 71 24 chrX 30000817 30000987 -136649309 + GA-rich Low_complexity Low_complexity 3 180 0 4 813 1700 199 12 33 chrX 30001009 30001354 -136648942 + RMER3D-int LTR ERVK 1014 1383 -1459 5 813 3419 53 2 0 chrX 30001354 30001749 -136648547 - MTA_Mm LTR MaLR 0 396 1 6 813 1700 193 13 36 chrX 30001749 30001906 -136648390 + RMER3D-int LTR ERVK 1384 1533 -1309 5 813 586 221 40 33 chrX 30001934 30002084 -136648212 + RMER3D-int LTR ERVK 1528 1678 -1164 5 813 3054 202 117 14 chrX 30002106 30003030 -136647266 + MYSERV16_I-int LTR ERVK 1308 2326 0 7 813 3067 96 7 2 chrX 30003030 30003449 -136646847 + BGLII LTR ERVK 1 421 0 7 813 1230 218 67 38 chrX 30003688 30004121 -136646175 - RLTR21 LTR ERVK -150 1254 706 8 813 12345 81 5 1 chrX 30004128 30006460 -136643836 - L1Md_F2 LINE L1 -19 6563 4225 9 813 13682 112 6 32 chrX 30006443 30009257 -136641039 - L1Md_F2 LINE L1 -2718 3165 446 9 813 838 154 11 51 chrX 30009260 30009438 -136640858 - RLTR21 LTR ERVK -855 717 547 8 813 354 23 0 0 chrX 30009445 30009488 -136640808 + (A)n Simple_repeat Simple_repeat 1 43 0 1 813 1428 220 22 40 chrX 30009505 30009827 -136640469 - RLTR21 LTR ERVK -1248 324 9 8 813 231 286 47 19 chrX 30010226 30010333 -136639963 - Lx6 LINE L1 -19 7441 7332 1 813 1748 261 20 30 chrX 30010325 30010567 -136639729 - Lx6 LINE L1 -1319 6141 5904 1 813 2205 198 17 14 chrX 30010567 30010987 -136639309 - MTC LTR MaLR 0 421 1 1 813 1748 261 20 30 chrX 30010987 30011284 -136639012 - Lx6 LINE L1 -1557 5903 5607 1 813 1124 206 25 3 chrX 30011291 30011574 -136638722 - L1_Mur3 LINE L1 -2593 3287 2999 1 813 3947 147 21 24 chrX 30011575 30012105 -136638191 - L1_Mus3 LINE L1 -8 6630 6101 1 813 2908 70 0 0 chrX 30012105 30012447 -136637849 - ORR1A1 LTR MaLR -4 342 1 1 813 3947 147 21 24 chrX 30012447 30012571 -136637725 - L1_Mus3 LINE L1 -538 6100 5978 1 813 4582 63 44 4 chrX 30012571 30013343 -136636953 + L1Md_F2 LINE L1 5273 6062 -520 1 813 355 78 15 15 chrX 30013343 30013408 -136636888 + L1Md_F2 LINE L1 6515 6579 -3 1 813 1283 300 44 55 chrX 30013408 30013952 -136636344 - RodERV21-int LTR ERV1 -3327 1664 1127 1 813 228 179 35 35 chrX 30015278 30015336 -136634960 + GA-rich Low_complexity Low_complexity 2 59 0 1 814 485 221 24 65 chrX 30015495 30015664 -136634632 - L1_Rod LINE L1 -305 5542 5381 1 814 2106 203 78 42 chrX 30015664 30016218 -136634078 + RLTR31A_Mm LTR ERVK 11 584 0 2 814 277 196 107 10 chrX 30016218 30016321 -136633975 - L1_Rod LINE L1 -475 5372 5260 1 814 814 143 7 73 chrX 30016460 30016611 -136633685 - B1_Mus1 SINE Alu 0 148 8 2 814 253 253 12 37 chrX 30016873 30016955 -136633341 - RMER17C-int LTR ERVK -21 3217 3138 2 814 3482 322 48 53 chrX 30017023 30017314 -136632982 - RodERV21-int LTR ERV1 -198 4793 4501 2 814 2727 118 35 56 chrX 30017314 30017743 -136632553 - RLTR9B2 LTR ERVK 0 420 1 2 814 3482 322 48 53 chrX 30017743 30019552 -136630744 - RodERV21-int LTR ERV1 -491 4500 2702 2 814 662 291 22 5 chrX 30019932 30020156 -136630140 - MuRRS4-int LTR ERV1 -130 4933 4706 2 814 12658 24 10 0 chrX 30020182 30022307 -136627989 - L1Md_A LINE L1 0 6582 4445 2 814 8392 42 0 1 chrX 30022305 30023352 -136626944 - L1Md_T LINE L1 0 6582 5537 2 814 488 219 0 19 chrX 30023357 30023464 -136626832 - RLTR6-int LTR ERV1 -257 7521 7417 2 814 764 164 0 7 chrX 30023464 30023599 -136626697 - MuRRS4-int LTR ERV1 -128 4935 4802 2 814 5240 170 57 63 chrX 30023604 30025901 -136624395 - MuRRS4-int LTR ERV1 -792 4271 1116 2 814 1477 272 33 7 chrX 30025939 30026361 -136623935 - MuRRS4-int LTR ERV1 -3619 1444 1012 3 814 728 266 16 74 chrX 30026507 30026763 -136623533 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 3 814 599 130 111 17 chrX 30026763 30026880 -136623416 - MuRRS4-int LTR ERV1 -4186 877 750 3 814 441 170 10 96 chrX 30026864 30026968 -136623328 - ETnERV-int LTR ERVK -3958 1448 1354 3 814 1045 157 39 6 chrX 30027068 30027247 -136623049 - ETnERV-int LTR ERVK -4045 1361 1177 3 814 1950 74 4 7 chrX 30027244 30027515 -136622781 - ETnERV-int LTR ERVK -3982 862 593 3 814 3708 53 0 7 chrX 30027512 30027968 -136622328 - ETnERV-int LTR ERVK -2861 453 1 3 814 1142 160 30 30 chrX 30027968 30028200 -136622096 - RLTRETN_Mm LTR ERVK 0 322 91 3 814 38480 26 8 8 chrX 30028226 30034842 -136615454 + L1Md_A LINE L1 1 5586 -297 3 814 9280 17 0 0 chrX 30034843 30035833 -136614463 + L1Md_A LINE L1 5588 6577 -5 3 814 743 61 0 115 chrX 30035859 30035989 -136614307 - RLTRETN_Mm LTR ERVK -207 115 1 3 814 7149 198 43 29 chrX 30035989 30037495 -136612801 - RLTR14-int LTR ERV1 -596 4721 3195 3 814 1286 175 187 45 chrX 30037495 30037853 -136612443 + RLTR9E LTR ERVK 1 409 0 3 814 737 230 17 69 chrX 30037855 30038178 -136612118 + ETnERV2-int LTR ERVK 2 372 -2942 3 814 278 182 0 18 chrX 30038173 30038229 -136612067 + RLTR45-int LTR ERVK 2091 2145 -5099 3 814 2025 181 74 19 chrX 30038696 30039169 -136611127 + ETnERV2-int LTR ERVK 1590 2088 -5318 3 814 2834 182 34 30 chrX 30039190 30039844 -136610452 + ETnERV2-int LTR ERVK 1934 3123 -4283 3 814 34015 83 2 1 chrX 30039845 30045322 -136604974 - L1Md_F2 LINE L1 -14 6571 996 3 814 35498 80 1 13 chrX 30045315 30051457 -136598839 - L1Md_F2 LINE L1 0 6582 519 3 814 299 83 21 0 chrX 30051458 30051506 -136598790 - L1Md_F LINE L1 -5494 1025 977 3 814 6644 117 7 50 chrX 30051497 30053424 -136596872 - L1Md_F LINE L1 -3728 2155 315 4 814 6923 94 3 7 chrX 30053425 30054365 -136595931 - L1Md_F LINE L1 -5494 1025 90 4 814 786 264 22 124 chrX 30054420 30054516 -136595780 + MMETn-int LTR ERVK 5037 5122 -2122 4 814 5127 63 0 7 chrX 30054516 30055125 -136595171 + L1Md_F2 LINE L1 5966 6570 -12 4 814 3158 183 15 42 chrX 30055125 30056064 -136594232 + MMETn-int LTR ERVK 2541 3719 -1125 4 814 779 195 0 0 chrX 30056059 30056182 -136594114 + MMETn-int LTR ERVK 6539 6661 -745 4 814 2564 206 104 17 chrX 30056212 30056916 -136593380 - RLTR14-int LTR ERV1 -2117 3200 2436 4 814 2190 249 123 33 chrX 30058373 30058885 -136591411 + RLTR40 LTR ERVK 22 571 -246 4 814 905 134 6 0 chrX 30058885 30059057 -136591239 + (GA)n Simple_repeat Simple_repeat 2 174 0 4 814 2190 249 123 33 chrX 30059057 30059211 -136591085 + RLTR40 LTR ERVK 572 752 -65 4 814 6154 93 34 2 chrX 30059211 30059625 -136590671 - RLTR13B1 LTR ERVK 0 893 476 4 814 360 0 0 0 chrX 30059625 30059665 -136590631 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 814 6154 93 34 2 chrX 30059665 30060116 -136590180 - RLTR13B1 LTR ERVK -418 475 3 4 814 2190 249 123 33 chrX 30060116 30060178 -136590118 + RLTR40 LTR ERVK 753 817 0 4 814 383 0 0 21 chrX 30060369 30060417 -136589879 + (TAA)n Simple_repeat Simple_repeat 2 48 0 4 814 756 226 57 10 chrX 30061948 30062140 -136588156 - Lx9 LINE L1 -243 7401 7201 5 814 403 191 0 0 chrX 30062140 30062224 -136588072 + Lx9 LINE L1 7554 7637 -7 5 814 517 287 13 0 chrX 30062233 30062383 -136587913 + Lx5 LINE L1 6825 6976 -74 5 814 393 22 0 0 chrX 30062391 30062437 -136587859 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 5 814 598 231 35 14 chrX 30062449 30062594 -136587702 + B1_Mur2 SINE Alu 1 148 -1 5 814 1934 151 27 0 chrX 30062623 30062961 -136587335 + L1_Mus3 LINE L1 6284 6630 -8 5 814 28 48 0 0 chrX 30062974 30063016 -136587280 + AT_rich Low_complexity Low_complexity 1 42 0 5 814 733 274 19 14 chrX 30063143 30063354 -136586942 + Lx4B LINE L1 6809 7020 -38 5 814 2868 179 32 2 chrX 30063390 30063982 -136586314 - L1_Mur2 LINE L1 -1176 4701 4092 5 814 10163 144 33 23 chrX 30063982 30065352 -136584944 - RLTR22_Mur LTR ERVK 0 1848 461 5 814 457 55 0 27 chrX 30065352 30065427 -136584869 + (TAG)n Simple_repeat Simple_repeat 3 75 0 6 814 10163 144 33 23 chrX 30065427 30065886 -136584410 - RLTR22_Mur LTR ERVK -1388 460 1 5 814 868 157 194 0 chrX 30065886 30066128 -136584168 - L1_Mur2 LINE L1 -1782 4095 3807 5 814 1352 142 25 4 chrX 30066172 30066413 -136583883 + L1_Mus4 LINE L1 6391 6636 0 6 814 180 0 0 0 chrX 30066902 30066922 -136583374 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 6 814 24 0 0 0 chrX 30068315 30068339 -136581957 + AT_rich Low_complexity Low_complexity 1 24 0 6 814 403 261 22 7 chrX 30068624 30068759 -136581537 + L1_Mur2 LINE L1 4334 4470 -1407 6 814 1571 44 44 0 chrX 30068784 30068989 -136581307 + L1Md_F2 LINE L1 6357 6570 -12 6 814 1269 194 86 61 chrX 30068989 30069421 -136580875 + RLTR21 LTR ERVK 706 1251 -153 6 814 2811 100 7 2 chrX 30069662 30070081 -136580215 - BGLII LTR ERVK 0 421 1 6 814 2687 212 119 8 chrX 30070081 30070998 -136579298 - MYSERV16_I-int LTR ERVK 0 2326 1308 6 814 2068 216 88 78 chrX 30071020 30071355 -136578941 - RMER3D-int LTR ERVK -1164 1678 1384 6 814 3176 53 5 0 chrX 30071355 30071749 -136578547 + MTA_Mm LTR MaLR 1 396 0 6 814 2068 206 85 60 chrX 30071749 30072094 -136578202 - RMER3D-int LTR ERVK -1459 1383 1016 6 814 483 158 11 68 chrX 30072116 30072306 -136577990 + CT-rich Low_complexity Low_complexity 2 180 0 7 814 599 216 35 39 chrX 30072319 30072617 -136577679 - RMER3D-int LTR ERVK -2069 773 329 6 814 659 204 63 31 chrX 30072658 30072904 -136577392 - RMER3D-int LTR ERVK -1993 849 652 7 814 471 145 0 0 chrX 30072919 30073007 -136577289 - RMER3D-int LTR ERVK -2278 564 489 7 814 1955 267 50 19 chrX 30073271 30073847 -136576449 - Lx7 LINE L1 -1042 6654 6061 7 814 684 241 69 47 chrX 30073883 30074158 -136576138 - Lx7 LINE L1 -1559 6137 5857 7 814 1106 260 82 0 chrX 30074557 30074849 -136575447 - MER2 DNA MER2_type -24 321 6 7 814 914 162 62 19 chrX 30075014 30075222 -136575074 + L1_Mm LINE L1 5234 5450 -433 7 814 2257 243 55 55 chrX 30075268 30076389 -136573907 + L1Md_F LINE L1 250 1205 -5433 7 814 19645 186 22 68 chrX 30076386 30080830 -136569466 + L1Md_F LINE L1 1071 5237 -649 7 814 306 0 0 0 chrX 30080830 30080864 -136569432 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 814 19645 188 21 71 chrX 30080864 30081356 -136568940 + L1Md_F LINE L1 5238 5740 -146 7 814 1604 63 13 5 chrX 30081356 30081580 -136568716 + MT2_Mm LTR ERVL 268 493 0 7 814 1004 133 0 0 chrX 30081590 30081748 -136568548 - L1_Mm LINE L1 -1520 4363 4206 7 814 562 197 74 0 chrX 30081741 30081863 -136568433 - Lx3C LINE L1 -553 6423 6293 8 814 1727 196 9 3 chrX 30081851 30082194 -136568102 - L1_Mur1 LINE L1 -189 5697 5353 8 814 10791 185 30 7 chrX 30082201 30085188 -136565108 + Lx4B LINE L1 3720 6782 -276 8 814 371 383 60 30 chrX 30085449 30085748 -136564548 - RMER1C Other Other -494 848 541 8 814 225 184 0 58 chrX 30085894 30085946 -136564350 - RMER2 LTR ERV1 -234 333 285 8 814 471 419 12 0 chrX 30086163 30086411 -136563885 - RMER1C Other Other -671 671 421 8 814 370 409 26 19 chrX 30086691 30086955 -136563341 - RMER1C Other Other -613 729 464 8 814 378 425 11 30 chrX 30087050 30087416 -136562880 - RMER1C Other Other -475 867 509 8 814 390 411 42 53 chrX 30087886 30088429 -136561867 - RMER1C Other Other -505 837 452 8 814 271 409 32 6 chrX 30089062 30089242 -136561054 - RMER1C Other Other -618 724 419 8 814 368 437 27 15 chrX 30089374 30089909 -136560387 - RMER1C Other Other -509 833 378 9 814 351 0 0 0 chrX 30090273 30090312 -136559984 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 814 340 415 35 29 chrX 30090428 30090741 -136559555 - RMER1C Other Other -605 737 423 9 814 542 416 33 41 chrX 30090783 30091313 -136558983 - RMER1C Other Other -468 874 412 9 814 234 382 79 20 chrX 30091420 30091572 -136558724 - RMER1C Other Other -642 700 540 9 814 403 419 40 40 chrX 30091712 30092381 -136557915 - RMER1C Other Other -459 883 390 9 814 294 29 0 0 chrX 30092671 30092706 -136557590 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 9 814 266 415 26 47 chrX 30092776 30093120 -136557176 - RMER1C Other Other -625 717 381 9 814 32392 124 9 24 chrX 30093913 30095680 -136554616 + L1Md_F3 LINE L1 233 1972 -3911 9 814 180 0 0 0 chrX 30095680 30095700 -136554596 + (CAA)n Simple_repeat Simple_repeat 2 21 0 9 814 32392 70 2 5 chrX 30095700 30099327 -136550969 + L1Md_F3 LINE L1 1973 5586 -297 9 814 7653 70 6 0 chrX 30099327 30100319 -136549977 + L1Md_F3 LINE L1 5587 6584 0 9 814 328 409 40 57 chrX 30100383 30100806 -136549490 - RMER1C Other Other -552 790 375 1 814 304 418 58 47 chrX 30100829 30101274 -136549022 - RMER1C Other Other -473 869 420 1 814 236 350 138 19 chrX 30101887 30102047 -136548249 - RMER1C Other Other -676 666 488 1 814 437 61 24 24 chrX 30102163 30102247 -136548049 + (TTTTG)n Simple_repeat Simple_repeat 3 86 0 1 814 288 445 4 0 chrX 30102674 30102903 -136547393 - RMER1C Other Other -701 641 412 1 814 337 411 6 6 chrX 30102946 30103127 -136547169 - RMER1C Other Other -625 717 537 1 814 232 445 7 0 chrX 30103451 30103588 -136546708 - RMER1C Other Other -670 672 535 1 814 504 282 7 21 chrX 30103963 30104108 -136546188 - Lx8 LINE L1 -691 6782 6640 1 814 921 284 35 35 chrX 30104263 30104631 -136545665 - ORR1D2 LTR MaLR -2 368 1 1 814 493 389 4 0 chrX 30104736 30104970 -136545326 - Lx8 LINE L1 -283 7190 6956 1 814 631 327 47 14 chrX 30104972 30105183 -136545113 + ORR1D2 LTR MaLR 1 218 -152 1 814 647 267 47 24 chrX 30105196 30105244 -136545052 + Lx6 LINE L1 2265 2322 -3555 1 814 477 0 0 0 chrX 30105244 30105297 -136544999 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 814 647 267 47 24 chrX 30105297 30105459 -136544837 + Lx6 LINE L1 2323 2479 -3398 1 814 1202 217 40 12 chrX 30105459 30105785 -136544511 + Lx6 LINE L1 3510 3844 -2033 1 814 2970 243 20 17 chrX 30105790 30106785 -136543511 + Lx6 LINE L1 5105 6108 -1352 1 814 24 32 0 0 chrX 30106925 30106956 -136543340 + AT_rich Low_complexity Low_complexity 1 31 0 1 814 350 284 71 47 chrX 30107094 30107264 -136543032 - RLTR1B LTR ERV1 -173 339 166 1 814 428 150 78 20 chrX 30107597 30107624 -136542672 + URR1B DNA MER1_type 118 144 -81 1 814 450 0 0 0 chrX 30107624 30107674 -136542622 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 814 428 150 78 20 chrX 30107674 30107748 -136542548 + URR1B DNA MER1_type 145 224 -1 1 814 3123 156 66 13 chrX 30107921 30108370 -136541926 - L1_Mur2 LINE L1 -699 5178 4731 1 814 216 0 0 0 chrX 30108370 30108394 -136541902 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1 814 3123 156 66 13 chrX 30108394 30108554 -136541742 - L1_Mur2 LINE L1 -1147 4730 4537 1 814 2213 258 68 3 chrX 30108551 30109157 -136541139 + Lx2B LINE L1 6342 6986 -14 1 814 610 198 9 0 chrX 30110010 30110121 -136540175 + Lx4A LINE L1 6719 6830 -228 1 814 6725 158 27 14 chrX 30110120 30111457 -136538839 + L1_Mus3 LINE L1 4601 5948 -690 1 814 24432 146 14 53 chrX 30111455 30114959 -136535337 + L1_Mus1 LINE L1 1492 4795 -1088 1 814 7777 80 4 14 chrX 30114959 30115964 -136534332 + L1Md_F2 LINE L1 5588 6582 0 1 814 24432 119 20 34 chrX 30115964 30117725 -136532571 + L1_Mus1 LINE L1 4796 6567 0 1 814 261 0 0 0 chrX 30117845 30117874 -136532422 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 814 1807 143 254 31 chrX 30117963 30118411 -136531885 - RLTR6_Mm LTR ERV1 -70 584 37 1 814 64208 36 23 1 chrX 30118524 30126133 -136524163 - RLTR6-int LTR ERV1 0 7778 2 1 814 1848 150 244 30 chrX 30126135 30126602 -136523694 - RLTR6_Mm LTR ERV1 -51 603 37 1 814 474 293 66 13 chrX 30126716 30126868 -136523428 + B3 SINE B2 4 163 -53 1 814 217 292 0 65 chrX 30126872 30126949 -136523347 + B4A SINE B4 82 153 -139 1 814 239 352 22 11 chrX 30126953 30127042 -136523254 + B3 SINE B2 113 202 -14 1 814 227 304 72 0 chrX 30127976 30128045 -136522251 - PB1 SINE Alu -51 76 3 1 814 261 294 15 0 chrX 30127983 30128051 -136522245 - B4A SINE B4 -142 150 82 1 814 432 143 0 0 chrX 30128622 30128633 -136521663 + (CATATA)n Simple_repeat Simple_repeat 4 14 0 1 814 186 43 0 0 chrX 30128633 30128656 -136521640 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 814 432 143 0 0 chrX 30128656 30128721 -136521575 + (CATATA)n Simple_repeat Simple_repeat 3 67 0 1 814 201 162 0 0 chrX 30128885 30128922 -136521374 + T-rich Low_complexity Low_complexity 2 38 0 1 814 25567 150 6 1 chrX 30129350 30134524 -136515772 - L1_Mus3 LINE L1 0 6638 1445 1 814 317 322 49 8 chrX 30134775 30134897 -136515399 + B1F SINE Alu 20 146 -3 1 814 21 36 0 0 chrX 30135145 30135173 -136515123 + AT_rich Low_complexity Low_complexity 1 28 0 1 814 225 0 0 0 chrX 30135536 30135561 -136514735 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1 814 366 261 160 10 chrX 30135816 30136016 -136514280 + B4 SINE B4 1 230 -62 1 814 1087 105 7 0 chrX 30136017 30136160 -136514136 + B1_Mus1 SINE Alu 4 147 -1 1 814 748 271 48 34 chrX 30136417 30136623 -136513673 + B3 SINE B2 2 210 -6 1 814 222 272 95 36 chrX 30137406 30137490 -136512806 - B1F SINE Alu -32 117 29 1 814 232 278 95 69 chrX 30137523 30137639 -136512657 - B1F SINE Alu -2 147 29 1 814 237 33 0 0 chrX 30137955 30137985 -136512311 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 814 450 0 0 0 chrX 30137986 30138036 -136512260 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 814 3089 27 3 0 chrX 30138739 30139075 -136511221 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 814 21292 17 2 2 chrX 30139075 30141441 -136508855 - IAPEz-int LTR ERVK 0 6481 4117 1 814 30311 30 16 16 chrX 30141433 30145011 -136505285 - IAPEz-int LTR ERVK -2896 3585 6 1 814 3028 24 6 0 chrX 30145011 30145344 -136504952 - IAPLTR1a_Mm LTR ERVK -2 335 1 1 814 21 0 0 0 chrX 30145926 30145947 -136504349 + AT_rich Low_complexity Low_complexity 1 21 0 1 814 3651 137 29 2 chrX 30145947 30146497 -136503799 - Lx LINE L1 -2 6652 6088 1 101 16714 160 17 60 chrX 30146498 30148395 -136501901 - L1VL2 LINE L1 -1273 4610 2808 1 815 1072 97 0 0 chrX 30148395 30148529 -136501767 - B1_Mus2 SINE Alu -13 134 1 1 815 16714 175 36 62 chrX 30148529 30151235 -136499061 - L1VL2 LINE L1 -3076 2807 300 1 815 643 311 94 34 chrX 30151361 30151627 -136498669 - B4A SINE B4 0 292 11 1 815 998 241 19 0 chrX 30151863 30152075 -136498221 - B3 SINE B2 0 216 1 1 815 390 256 59 8 chrX 30152223 30152341 -136497955 - B1F SINE Alu -5 144 21 1 815 446 289 0 0 chrX 30152401 30152505 -136497791 - B3 SINE B2 -15 201 98 1 815 4436 138 12 19 chrX 30153346 30154143 -136496153 - YREP_Mm Unknown Unknown -35 1777 986 1 815 272 342 116 34 chrX 30154148 30154381 -136495915 - L2 LINE L2 -1119 2300 2049 1 815 228 86 0 0 chrX 30154477 30154512 -136495784 + (CCA)n Simple_repeat Simple_repeat 1 35 0 1 815 553 322 46 18 chrX 30154548 30154764 -136495532 + B4A SINE B4 75 290 -2 1 815 188 333 62 37 chrX 30155237 30155399 -136494897 - L2 LINE L2 -1760 1659 1494 1 815 6214 129 11 31 chrX 30156714 30157703 -136492593 - Lx3A LINE L1 -7 6974 6006 1 815 281 303 56 70 chrX 30158144 30158428 -136491868 + RMER17C LTR ERVK 83 362 -48 1 815 872 120 34 27 chrX 30158707 30158853 -136491443 + L1_Mus1 LINE L1 6421 6567 0 1 815 3961 76 2 33 chrX 30158857 30159694 -136490602 - L1Md_A LINE L1 -4124 1759 964 1 815 15001 69 3 1 chrX 30159693 30162328 -136487968 - L1Md_F2 LINE L1 0 6582 3942 1 815 697 188 18 99 chrX 30212328 30212499 -136437797 - RLTR13B1 LTR ERVK -736 157 1 1 815 216 0 0 0 chrX 30212500 30212524 -136437772 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 815 517 161 131 0 chrX 30212592 30212722 -136437574 - Lx5 LINE L1 0 7050 6904 1 815 559 253 48 59 chrX 30212735 30213162 -136437134 - L1_Mur3 LINE L1 -4451 1429 1006 1 815 209 108 27 0 chrX 30213162 30213199 -136437097 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 1 815 3018 122 12 37 chrX 30213590 30214077 -136436219 - MT2C_Mm LTR ERVL 0 475 1 1 815 1569 128 75 0 chrX 30214998 30215264 -136435032 - ORR1C2 LTR MaLR -4 380 95 1 815 2065 93 64 72 chrX 30215265 30215624 -136434672 + RLTR10B2 LTR ERVK 1 356 -9 1 815 587 179 27 0 chrX 30215628 30215740 -136434556 - ORR1C2 LTR MaLR -263 115 1 1 815 460 224 65 20 chrX 30215796 30215917 -136434379 - MTD LTR MaLR -14 405 287 1 815 801 184 114 6 chrX 30215987 30216162 -136434134 - URR1A DNA MER1_type 0 226 33 1 815 350 290 85 18 chrX 30216016 30216181 -136434115 + CYRA11_Mm Unknown Y-chromosome 216 391 -226 1 815 698 332 68 0 chrX 30216275 30216480 -136433816 + B4A SINE B4 1 219 -73 1 815 384 77 0 0 chrX 30216547 30216599 -136433697 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 815 1049 109 0 0 chrX 30216676 30216823 -136433473 + B1_Mus1 SINE Alu 1 147 -1 1 815 425 259 144 63 chrX 30217276 30217659 -136432637 - MER106B DNA MER1_type -201 858 445 1 815 231 356 16 41 chrX 30217675 30217798 -136432498 - MER106B DNA MER1_type -674 385 266 1 815 503 324 66 59 chrX 30218007 30218263 -136432033 - MER106B DNA MER1_type -801 258 1 1 815 708 271 28 11 chrX 30218393 30218570 -136431726 + MTE2b LTR MaLR 5 184 -195 1 815 1520 231 87 12 chrX 30218570 30218916 -136431380 - ORR1D1 LTR MaLR 0 374 3 1 815 560 291 26 68 chrX 30218919 30219111 -136431185 + MTE2b LTR MaLR 181 364 -15 1 815 1975 159 13 0 chrX 30219179 30219493 -136430803 + ORR1A3 LTR MaLR 1 318 -8 1 815 2011 118 30 31 chrX 30219628 30219984 -136430312 + MT2B2 LTR ERVL 189 582 -2 1 815 9605 157 61 14 chrX 30219986 30221862 -136428434 + ORR1A3-int LTR MaLR 1 1963 0 1 815 1790 188 0 9 chrX 30221862 30222185 -136428111 + ORR1A3 LTR MaLR 1 320 -6 1 815 3738 133 69 16 chrX 30222185 30222676 -136427620 + Lx LINE L1 6012 6518 -136 1 815 204 40 0 0 chrX 30222676 30222701 -136427595 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 1 815 3738 133 69 16 chrX 30222701 30222820 -136427476 + Lx LINE L1 6519 6653 -1 1 815 628 227 35 0 chrX 30222910 30223051 -136427245 - B1_Mur1 SINE Alu -2 147 2 1 815 1709 142 101 39 chrX 30223840 30224178 -136426118 + ORR1B2 LTR MaLR 1 359 -8 1 815 23 33 0 0 chrX 30224880 30224910 -136425386 + AT_rich Low_complexity Low_complexity 1 30 0 1 815 315 359 65 64 chrX 30224954 30225542 -136424754 + L2a LINE L2 2796 3386 -40 1 815 2850 233 30 58 chrX 30225835 30226199 -136424097 - RMER6D LTR ERVK -4 716 368 1 815 180 0 0 0 chrX 30226199 30226219 -136424077 + (CCA)n Simple_repeat Simple_repeat 1 20 0 1 815 2850 233 30 58 chrX 30226219 30226279 -136424017 - RMER6D LTR ERVK -353 367 315 1 815 2041 137 92 3 chrX 30226279 30226617 -136423679 + RLTR9A LTR ERVK 1 368 0 1 815 2850 233 30 58 chrX 30226617 30226703 -136423593 - RMER6D LTR ERVK -406 314 231 1 815 2494 66 122 11 chrX 30226703 30227054 -136423242 - RLTR10 LTR ERVK 0 390 1 1 815 2850 233 30 58 chrX 30227054 30227262 -136423034 - RMER6D LTR ERVK -490 230 16 1 815 2025 197 36 0 chrX 30227288 30227714 -136422582 + L1_Mur2 LINE L1 383 814 -6272 1 815 1447 108 23 19 chrX 30227717 30227973 -136422323 + L1_Mur2 LINE L1 1484 1740 -4137 1 815 5623 165 11 88 chrX 30227951 30228679 -136421617 + L1_Mur2 LINE L1 2141 2863 -3023 1 815 1905 201 48 2 chrX 30228679 30229098 -136421198 - BGLII_A LTR ERVK -7 438 1 1 815 5623 165 11 88 chrX 30229098 30230018 -136420278 + L1_Mur2 LINE L1 2864 3779 -2107 1 815 4681 217 53 4 chrX 30230455 30230978 -136419318 + L1VL4 LINE L1 859 1410 -4476 1 815 2210 107 10 0 chrX 30230978 30231288 -136419008 + L1_Mus1 LINE L1 6255 6567 0 1 815 4681 188 63 8 chrX 30231288 30232131 -136418165 + L1VL4 LINE L1 1411 2304 -3582 1 815 1957 279 68 51 chrX 30232134 30232764 -136417532 + RLTR26 LTR ERVK 2 642 0 1 815 1429 141 15 12 chrX 30232771 30233030 -136417266 + L1VL4 LINE L1 2308 2567 -3319 1 815 31808 91 19 7 chrX 30233032 30237750 -136412546 + L1_Mus2 LINE L1 199 5038 -848 2 815 6002 107 6 0 chrX 30237750 30238548 -136411748 + L1_Mus1 LINE L1 5765 6567 0 2 815 31808 94 20 2 chrX 30238548 30240016 -136410280 + L1_Mus2 LINE L1 5039 6568 -1 2 815 912 184 113 7 chrX 30240034 30240318 -136409978 + L1_Mur3 LINE L1 3073 3386 -2494 2 815 5761 188 40 49 chrX 30240324 30241655 -136408641 + L1_Mur3 LINE L1 4418 5736 -144 2 815 713 346 70 19 chrX 30242834 30243317 -136406979 - Lx8 LINE L1 -236 7237 6730 2 815 1548 299 79 21 chrX 30243332 30243902 -136406394 - Lx8 LINE L1 -800 6673 6071 2 815 719 276 11 50 chrX 30244250 30244609 -136405687 + RMER19A LTR ERVK 1 259 -478 2 815 414 0 0 0 chrX 30244817 30244863 -136405433 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 815 352 284 0 61 chrX 30245215 30245380 -136404916 + GA-rich Low_complexity Low_complexity 4 158 0 2 815 890 285 77 35 chrX 30247853 30248191 -136402105 - MTE2a LTR MaLR 0 379 28 2 815 476 284 60 7 chrX 30248193 30248342 -136401954 - MTE2a-int LTR MaLR 0 1580 1424 2 815 803 180 29 23 chrX 30248343 30248514 -136401782 - L1_Mur3 LINE L1 -1120 4760 4589 2 815 29 0 0 0 chrX 30250782 30250811 -136399485 + AT_rich Low_complexity Low_complexity 1 29 0 2 815 14385 137 10 8 chrX 30250840 30253939 -136396357 - L1_Mus3 LINE L1 0 6638 3531 2 815 979 158 10 13 chrX 30253921 30254114 -136396182 - L1_Mus3 LINE L1 -3724 2422 2228 2 815 625 303 25 21 chrX 30254554 30254837 -136395459 + RLTR15 LTR ERVK 3 286 -73 2 815 1613 236 40 0 chrX 30254898 30255225 -136395071 + ORR1B1 LTR MaLR 14 353 -41 2 815 474 186 0 183 chrX 30255225 30255389 -136394907 + B1_Mus2 SINE Alu 1 134 -13 2 815 231 197 14 27 chrX 30255396 30255469 -136394827 + (CAGAGA)n Simple_repeat Simple_repeat 4 75 0 2 815 351 44 0 0 chrX 30255469 30255514 -136394782 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 815 279 0 0 0 chrX 30255516 30255547 -136394749 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 815 414 94 0 0 chrX 30256116 30256180 -136394116 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 2 815 279 197 212 0 chrX 30256273 30256339 -136393957 + RLTR6_Mm LTR ERV1 2 81 -573 2 815 1932 131 252 32 chrX 30256379 30256844 -136393452 + RLTR6_Mm LTR ERV1 37 603 -51 2 815 33184 34 26 0 chrX 30256845 30261080 -136389216 + RLTR6-int LTR ERV1 1 4421 -3357 2 815 7323 37 1 0 chrX 30261075 30261920 -136388376 + RLTR6-int LTR ERV1 6933 7778 0 2 815 1860 190 135 81 chrX 30261920 30262476 -136387820 + RLTR6_Mm LTR ERV1 1 586 -68 2 815 488 234 114 21 chrX 30262474 30262614 -136387682 + ORR1D1 LTR MaLR 205 357 -17 2 815 310 93 164 18 chrX 30262883 30262938 -136387358 + RMER10B LTR ERVL 1 63 -335 2 815 423 184 48 75 chrX 30262964 30263111 -136387185 + RMER17C-int LTR ERVK 2733 2875 -363 2 815 320 212 83 66 chrX 30263150 30263271 -136387025 + RMER17C-int LTR ERVK 2972 3094 -144 2 815 1506 161 75 117 chrX 30263337 30263765 -136386531 - RMER17C LTR ERVK 0 410 1 2 815 1552 183 182 6 chrX 30263780 30264115 -136386181 + RMER10B LTR ERVL 5 398 0 2 815 1216 179 13 22 chrX 30264380 30264554 -136385742 - URR1A DNA MER1_type 0 226 52 2 815 516 81 0 0 chrX 30264554 30264628 -136385668 + (TA)n Simple_repeat Simple_repeat 2 75 0 2 815 1216 179 13 22 chrX 30264628 30264681 -136385615 - URR1A DNA MER1_type -175 51 1 2 815 29 0 0 0 chrX 30265666 30265695 -136384601 + AT_rich Low_complexity Low_complexity 1 29 0 2 815 814 203 13 20 chrX 30265930 30266081 -136384215 - B1_Mur4 SINE Alu 0 150 1 2 815 411 78 130 0 chrX 30266357 30266434 -136383862 + ORR1A2 LTR MaLR 1 87 -240 2 815 1829 110 250 0 chrX 30266436 30266764 -136383532 - ORR1A2-int LTR MaLR -535 1428 1019 2 815 289 342 51 0 chrX 30266769 30266886 -136383410 + ETnERV2-int LTR ERVK 7074 7196 -210 2 815 2986 194 35 29 chrX 30267159 30267737 -136382559 - ORR1A2-int LTR MaLR -936 1027 394 2 815 2908 73 7 120 chrX 30267737 30267994 -136382302 - MTB LTR MaLR 0 400 183 2 815 1159 82 0 7 chrX 30267994 30268141 -136382155 - B1_Mm SINE Alu 0 147 2 2 815 2908 73 7 120 chrX 30268141 30268333 -136381963 - MTB LTR MaLR -218 182 2 2 815 2986 176 20 20 chrX 30268333 30268720 -136381576 - ORR1A2-int LTR MaLR -1395 397 1 2 815 2320 125 25 0 chrX 30268720 30269039 -136381257 - ORR1A2 LTR MaLR 0 327 1 2 815 1683 131 11 0 chrX 30269039 30269314 -136380982 + ORR1A2-int LTR MaLR 1686 1963 0 2 815 2085 153 3 58 chrX 30269314 30269660 -136380636 + ORR1A2 LTR MaLR 1 327 0 2 815 308 388 33 48 chrX 30269878 30270486 -136379810 + L2a LINE L2 2791 3386 -40 2 815 2824 217 69 35 chrX 30270780 30271116 -136379180 - RMER6D LTR ERVK 0 720 366 2 815 300 91 0 0 chrX 30271116 30271160 -136379136 + (CCA)n Simple_repeat Simple_repeat 3 46 0 2 815 2824 217 69 35 chrX 30271160 30271217 -136379079 - RMER6D LTR ERVK -355 365 315 2 815 2123 145 69 6 chrX 30271217 30271563 -136378733 + RLTR9A LTR ERVK 1 368 0 2 815 2824 217 69 35 chrX 30271563 30271850 -136378446 - RMER6D LTR ERVK -406 314 16 2 815 270 139 0 0 chrX 30271876 30271919 -136378377 + L1_Mur2 LINE L1 151 193 -6519 2 815 347 45 0 0 chrX 30271936 30271980 -136378316 + RLTR1 LTR ERV1 581 624 0 2 815 4031 134 202 2 chrX 30271980 30273081 -136377215 + L1_Mur2 LINE L1 410 1746 -4131 2 815 9272 132 30 17 chrX 30273052 30273776 -136376520 + L1_Mur2 LINE L1 2140 2850 -3027 2 815 2179 188 45 2 chrX 30273776 30274203 -136376093 - BGLII_A LTR ERVK 0 445 1 2 815 9272 132 30 17 chrX 30274203 30275088 -136375208 + L1_Mur2 LINE L1 2851 3769 -2108 2 815 3656 217 52 18 chrX 30275466 30275936 -136374360 + L1VL4 LINE L1 820 1414 -2500 2 815 2092 130 7 0 chrX 30275936 30276243 -136374053 + L1_Mus1 LINE L1 6259 6567 0 2 815 4156 178 48 12 chrX 30276243 30277101 -136373195 + L1VL4 LINE L1 1415 2304 -3582 2 815 1497 264 38 30 chrX 30277109 30277573 -136372723 + RLTR26 LTR ERVK 1 496 -146 2 816 8874 173 22 12 chrX 30277649 30277801 -136372495 + L1VL4 LINE L1 2298 2451 -3435 2 816 2898 84 5 2 chrX 30277801 30278196 -136372100 + MTA_Mm LTR MaLR 1 396 0 2 816 8874 173 22 12 chrX 30278196 30279987 -136370309 + L1VL4 LINE L1 2452 4260 -1626 2 816 1138 144 0 5 chrX 30279987 30280176 -136370120 + B2_Mm2 SINE B2 1 188 -7 2 816 4412 145 45 2 chrX 30280196 30281046 -136369250 + L1VL4 LINE L1 4871 5793 -371 2 816 2289 204 19 7 chrX 30281036 30281501 -136368795 + Lx4A LINE L1 6493 6963 -95 2 816 1035 31 0 0 chrX 30281501 30281629 -136368667 - RLTR6-int LTR ERV1 -7650 128 1 2 816 1931 131 249 32 chrX 30281630 30282096 -136368200 - RLTR6_Mm LTR ERV1 -51 603 37 2 816 259 228 200 38 chrX 30282098 30282203 -136368093 - RLTR6_Mm LTR ERV1 -532 122 1 2 816 486 83 0 0 chrX 30282295 30282367 -136367929 + (TTCC)n Simple_repeat Simple_repeat 3 74 0 2 816 387 0 0 0 chrX 30282936 30282979 -136367317 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 816 459 35 0 0 chrX 30282981 30283038 -136367258 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 816 206 211 14 27 chrX 30283038 30283111 -136367185 + (TCTCTG)n Simple_repeat Simple_repeat 4 75 0 2 816 464 186 0 183 chrX 30283118 30283282 -136367014 - B1_Mus2 SINE Alu -13 134 1 2 816 1626 236 40 0 chrX 30283282 30283609 -136366687 - ORR1B1 LTR MaLR -41 353 14 2 816 637 307 25 21 chrX 30283670 30283953 -136366343 - RLTR15 LTR ERVK -73 286 3 2 816 891 111 0 7 chrX 30284429 30284574 -136365722 + L1_Mus3 LINE L1 2241 2384 -3499 2 816 13481 135 9 8 chrX 30284568 30287665 -136362631 + L1_Mus3 LINE L1 3531 6632 -6 2 816 29 0 0 0 chrX 30287699 30287728 -136362568 + AT_rich Low_complexity Low_complexity 1 29 0 2 816 723 180 29 23 chrX 30289998 30290169 -136360127 + L1_Mur3 LINE L1 4589 4760 -1120 2 816 460 291 60 7 chrX 30290170 30290319 -136359977 + MTE2a-int LTR MaLR 1424 1580 0 2 816 854 301 77 35 chrX 30290321 30290659 -136359637 + MTE2a LTR MaLR 28 379 0 2 816 377 277 0 61 chrX 30293132 30293297 -136356999 + CT-rich Low_complexity Low_complexity 4 158 0 2 816 414 0 0 0 chrX 30293649 30293695 -136356601 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 816 740 279 6 44 chrX 30293903 30294262 -136356034 - RMER19A LTR ERVK -478 259 1 2 816 1328 301 79 21 chrX 30294610 30295180 -136355116 + Lx8 LINE L1 6071 6673 -800 2 816 562 350 70 17 chrX 30295195 30295677 -136354619 + Lx8 LINE L1 6730 7237 -236 2 816 5116 190 40 50 chrX 30296856 30298188 -136352108 - L1_Mur3 LINE L1 -144 5736 4418 2 816 828 191 113 7 chrX 30298194 30298478 -136351818 - L1_Mur3 LINE L1 -2494 3386 3073 2 816 6516 116 12 2 chrX 30298496 30299953 -136350343 - L1_Mus2 LINE L1 -1 6565 5092 2 816 21760 125 13 8 chrX 30299965 30304509 -136345787 - L1_Mus1 LINE L1 0 6567 2001 2 816 204 67 0 0 chrX 30304509 30304539 -136345757 + (T)n Simple_repeat Simple_repeat 1 30 0 2 816 317 0 0 0 chrX 30304542 30304586 -136345710 - L1Md_T LINE L1 -2 6580 6537 2 816 26088 78 53 2 chrX 30304586 30309905 -136340391 - L1Md_T LINE L1 -3 6582 527 2 816 571 273 66 123 chrX 30309911 30310388 -136339908 - L1VL1 LINE L1 -6027 395 27 2 816 642 151 33 46 chrX 30310588 30310741 -136339555 - L1Md_F2 LINE L1 -4 6580 6430 2 816 28234 101 35 11 chrX 30310753 30312729 -136337567 - L1Md_F2 LINE L1 -262 6320 4352 2 816 3315 28 15 0 chrX 30312729 30313119 -136337177 + MTA_Mm LTR MaLR 1 396 0 2 816 28234 100 35 14 chrX 30313119 30313887 -136336409 - L1Md_F2 LINE L1 -1532 4351 3489 2 816 318 26 0 0 chrX 30313887 30313926 -136336370 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 2 816 28234 100 29 13 chrX 30313926 30316432 -136333864 - L1Md_F2 LINE L1 -2395 3488 951 2 816 2031 206 77 2 chrX 30316432 30316874 -136333422 - MERVL_2A-int LTR ERVL -2157 3604 3130 2 816 269 161 18 0 chrX 30316911 30316967 -136333329 + MERVL_2A-int LTR ERVL 2209 2265 -3496 2 816 4655 103 39 12 chrX 30317474 30318250 -136332046 + L1_Mur2 LINE L1 4827 5623 -254 2 816 4616 161 8 3 chrX 30318244 30319119 -136331177 - L1_Mur2 LINE L1 -1052 4825 3947 2 816 180 0 0 0 chrX 30319209 30319229 -136331067 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 2 816 603 205 160 28 chrX 30319230 30319447 -136330849 + Lx4B LINE L1 6788 7054 -4 2 816 189 0 0 0 chrX 30319903 30319924 -136330372 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2 816 4792 72 11 5 chrX 30319953 30320592 -136329704 - L1_Mus1 LINE L1 0 6567 5925 2 816 4175 138 8 56 chrX 30320592 30321394 -136328902 - RMER17A LTR ERVK -2 749 1 2 816 4826 72 5 26 chrX 30321394 30322201 -136328095 - L1_Mus1 LINE L1 -635 5932 5154 2 816 1039 97 0 0 chrX 30322198 30322353 -136327943 + L1_Mus1 LINE L1 4992 5146 -737 2 816 931 163 0 0 chrX 30322941 30323082 -136327214 - B1_Mur4 SINE Alu -9 141 1 2 816 784 279 66 52 chrX 30323143 30323488 -136326808 + MTEa LTR MaLR 13 379 0 2 816 357 109 0 0 chrX 30323749 30323813 -136326483 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 816 396 0 0 0 chrX 30323813 30323856 -136326440 + (GA)n Simple_repeat Simple_repeat 2 45 0 2 816 1394 179 14 0 chrX 30324565 30324862 -136325434 + L1Md_F LINE L1 166 466 -6053 2 816 33382 34 3 1 chrX 30324859 30329136 -136321160 + L1Md_T LINE L1 1301 5586 -297 2 816 8119 39 15 1 chrX 30329136 30330116 -136320180 + L1Md_T LINE L1 5587 6580 -2 2 816 23 33 0 0 chrX 30331595 30331625 -136318671 + AT_rich Low_complexity Low_complexity 1 30 0 2 816 537 266 148 10 chrX 30331883 30332194 -136318102 - L1MD2 LINE L1 -368 5991 5638 2 816 5403 119 20 5 chrX 30332216 30333055 -136317241 - L1_Mus3 LINE L1 0 6638 5787 2 816 2358 85 0 0 chrX 30333073 30333413 -136316883 + L1_Mm LINE L1 4190 4529 -1354 2 816 762 122 0 0 chrX 30333775 30333890 -136316406 - ORR1A2 LTR MaLR 0 327 213 2 816 669 197 0 15 chrX 30333945 30334079 -136316217 - MT2B LTR ERVL -469 132 1 2 816 771 188 17 29 chrX 30334083 30334258 -136316038 - L1_Mur3 LINE L1 -1807 4073 3901 2 816 316 190 0 187 chrX 30334258 30334381 -136315915 + MT2B LTR ERVL 157 256 -345 2 816 890 187 0 0 chrX 30334277 30334427 -136315869 + B1_Mur4 SINE Alu 1 150 0 3 816 2000 243 53 43 chrX 30334455 30334707 -136315589 - L1_Mur3 LINE L1 -1997 3883 3621 2 816 6335 124 19 15 chrX 30334707 30335726 -136314570 + RLTR13D5 LTR ERVK 1 1023 0 3 816 2000 243 53 43 chrX 30335726 30336147 -136314149 - L1_Mur3 LINE L1 -2260 3620 3188 2 816 956 148 21 52 chrX 30336147 30336339 -136313957 - B2_Mm2 SINE B2 -8 187 2 3 816 2000 243 53 43 chrX 30336339 30336493 -136313803 - L1_Mur3 LINE L1 -2693 3187 3047 2 816 406 147 0 31 chrX 30336494 30336592 -136313704 + CT-rich Low_complexity Low_complexity 2 96 0 3 816 6716 102 11 3 chrX 30336615 30337642 -136312654 - L1_Mus3 LINE L1 0 6638 5604 3 816 1998 226 28 46 chrX 30337648 30338361 -136311935 - L1_Mur3 LINE L1 -3722 2158 1459 2 816 976 137 7 0 chrX 30338363 30338509 -136311787 + B1_Mus1 SINE Alu 1 147 -1 3 816 5071 110 26 54 chrX 30338539 30339424 -136310872 - RLTR13A3 LTR ERVK 0 978 119 3 816 216 0 0 0 chrX 30339441 30339465 -136310831 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 816 526 154 131 0 chrX 30339533 30339663 -136310633 - Lx5 LINE L1 0 7050 6904 3 816 690 259 67 54 chrX 30339676 30340088 -136310208 - L1_Mur3 LINE L1 -4451 1429 1005 2 816 289 58 39 0 chrX 30340088 30340140 -136310156 + (TTTG)n Simple_repeat Simple_repeat 1 54 0 3 816 690 251 77 68 chrX 30340140 30340255 -136310041 - L1_Mur3 LINE L1 -6724 1004 894 2 816 2883 122 35 7 chrX 30340530 30340992 -136309304 - MT2C_Mm LTR ERVL 0 475 1 3 816 1598 124 75 0 chrX 30341913 30342179 -136308117 - ORR1C2 LTR MaLR -4 380 95 3 816 2088 90 64 72 chrX 30342180 30342539 -136307757 + RLTR10B2 LTR ERVK 1 356 -9 3 816 587 179 27 0 chrX 30342543 30342655 -136307641 - ORR1C2 LTR MaLR -263 115 1 3 816 471 218 59 27 chrX 30342711 30342832 -136307464 - MTD LTR MaLR -14 405 282 3 816 801 184 114 6 chrX 30342902 30343077 -136307219 - URR1A DNA MER1_type 0 226 33 3 816 363 288 84 18 chrX 30342931 30343097 -136307199 + CYRA11_Mm Unknown Y-chromosome 216 392 -225 3 816 698 332 68 0 chrX 30343190 30343395 -136306901 + B4A SINE B4 1 219 -73 3 816 384 77 0 0 chrX 30343462 30343514 -136306782 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 816 1038 116 0 0 chrX 30343589 30343736 -136306560 + B1_Mus1 SINE Alu 1 147 -1 3 816 26 0 0 0 chrX 30344161 30344187 -136306109 + AT_rich Low_complexity Low_complexity 1 26 0 3 816 435 251 143 65 chrX 30344189 30344573 -136305723 - MER106B DNA MER1_type -201 858 445 3 816 247 350 106 0 chrX 30344589 30344712 -136305584 - MER106B DNA MER1_type -658 401 266 3 816 504 245 71 41 chrX 30344914 30345084 -136305212 - MER106B DNA MER1_type -801 258 84 3 816 668 288 28 11 chrX 30345300 30345477 -136304819 + MTE2b LTR MaLR 5 184 -195 3 816 1553 225 87 12 chrX 30345477 30345823 -136304473 - ORR1D1 LTR MaLR 0 374 3 3 816 508 307 26 68 chrX 30345826 30346018 -136304278 + MTE2b LTR MaLR 181 364 -15 3 816 1935 162 13 0 chrX 30346086 30346400 -136303896 + ORR1A3 LTR MaLR 1 318 -8 3 816 344 324 61 20 chrX 30346785 30346933 -136303363 + RMER15 LTR ERVL 422 575 0 3 816 2078 125 29 45 chrX 30346933 30347328 -136302968 + MT2B2 LTR ERVL 155 582 -2 3 816 9753 152 63 14 chrX 30347330 30349202 -136301094 + ORR1A3-int LTR MaLR 1 1963 0 3 816 1653 188 19 9 chrX 30349202 30349524 -136300772 + ORR1A3 LTR MaLR 1 325 -1 3 816 3602 132 42 24 chrX 30349524 30350151 -136300145 + Lx LINE L1 6017 6654 0 3 816 24 0 0 0 chrX 30350178 30350202 -136300094 + AT_rich Low_complexity Low_complexity 1 24 0 3 816 551 241 35 0 chrX 30350251 30350392 -136299904 - B1_Mur1 SINE Alu -2 147 2 3 816 1762 135 101 36 chrX 30351181 30351518 -136298778 + ORR1B2 LTR MaLR 1 359 -8 3 816 23 33 0 0 chrX 30352222 30352252 -136298044 + AT_rich Low_complexity Low_complexity 1 30 0 3 816 324 359 69 70 chrX 30352296 30352882 -136297414 + L2a LINE L2 2796 3383 -43 3 816 3032 218 38 53 chrX 30353173 30353541 -136296755 - RMER6D LTR ERVK 0 720 363 3 816 387 0 0 0 chrX 30353541 30353584 -136296712 + (CCA)n Simple_repeat Simple_repeat 2 44 0 3 816 3032 218 38 53 chrX 30353584 30353642 -136296654 - RMER6D LTR ERVK -358 362 315 3 816 1795 148 92 3 chrX 30353642 30353980 -136296316 + RLTR9A LTR ERVK 1 368 0 3 816 3032 218 38 53 chrX 30353980 30354268 -136296028 - RMER6D LTR ERVK -406 314 16 3 816 3986 138 200 5 chrX 30354294 30355406 -136294890 + L1_Mur2 LINE L1 383 1713 -4164 3 816 9141 122 13 22 chrX 30355411 30356135 -136294161 + L1_Mur2 LINE L1 2141 2850 -3027 3 816 1891 202 45 2 chrX 30356135 30356562 -136293734 - BGLII_A LTR ERVK 0 445 1 3 816 9141 122 13 22 chrX 30356562 30357483 -136292813 + L1_Mur2 LINE L1 2851 3770 -2107 3 816 4262 213 53 5 chrX 30357929 30358443 -136291853 + L1VL4 LINE L1 869 1410 -4476 3 816 2234 93 3 0 chrX 30358443 30358755 -136291541 + L1_Mus1 LINE L1 6255 6567 0 3 816 4262 189 65 9 chrX 30358755 30359597 -136290699 + L1VL4 LINE L1 1411 2304 -3582 3 816 2031 266 68 54 chrX 30359600 30360232 -136290064 + RLTR26 LTR ERVK 2 642 0 3 816 1378 118 19 19 chrX 30360239 30360499 -136289797 + L1_Mur2 LINE L1 2308 2567 -3319 3 816 30571 80 3 4 chrX 30360503 30365800 -136284496 + L1Md_F2 LINE L1 201 5589 -297 3 816 7757 62 4 3 chrX 30365800 30366795 -136283501 + L1Md_F2 LINE L1 5590 6585 0 3 816 243 61 0 0 chrX 30367217 30367250 -136283046 + (A)n Simple_repeat Simple_repeat 1 33 0 3 816 5212 234 122 64 chrX 30367251 30369383 -136280913 + L1_Mur2 LINE L1 2558 4832 -1045 3 816 1326 107 0 5 chrX 30369383 30369571 -136280725 + B2_Mm2 SINE B2 1 187 -8 3 816 5212 234 122 64 chrX 30369571 30369648 -136280648 + L1_Mur2 LINE L1 4833 4926 -951 3 816 213 39 0 0 chrX 30369648 30369674 -136280622 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 3 816 976 137 0 0 chrX 30369678 30369817 -136280479 - B1_Mus2 SINE Alu -4 143 5 3 816 5212 239 115 61 chrX 30369817 30370631 -136279665 + L1_Mur2 LINE L1 4927 5792 -388 3 816 2599 197 30 15 chrX 30370639 30371174 -136279122 + Lx4A LINE L1 6515 7057 -1 3 816 24 0 0 0 chrX 30371174 30371198 -136279098 + AT_rich Low_complexity Low_complexity 1 24 0 3 816 4224 215 42 13 chrX 30371818 30372694 -136277602 - RMER19B LTR ERVK 0 902 1 3 816 225 83 0 0 chrX 30375903 30375939 -136274357 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 3 816 867 69 7 40 chrX 30376819 30376970 -136273326 + (TA)n Simple_repeat Simple_repeat 2 147 0 3 816 6367 115 15 2 chrX 30377584 30378690 -136271606 - L1_Mus3 LINE L1 0 6638 5515 3 816 17178 154 18 19 chrX 30378708 30381030 -136269266 - L1_Mus3 LINE L1 -1270 4613 2278 3 816 2549 84 6 3 chrX 30381030 30381375 -136268921 + ORR1A1 LTR MaLR 1 346 0 3 816 17178 154 19 36 chrX 30381375 30383297 -136266999 - L1_Mus3 LINE L1 -3606 2277 410 3 816 902 252 58 10 chrX 30383761 30383969 -136266327 + RLTR41 LTR ERV1 229 446 0 3 816 1350 230 56 6 chrX 30383973 30384303 -136265993 - ORR1B1-int LTR MaLR -852 728 325 3 816 2911 105 75 2 chrX 30384303 30384799 -136265497 - RLTR47_MM LTR ERV1 0 532 1 3 816 189 0 0 0 chrX 30385084 30385105 -136265191 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 3 816 1745 184 37 26 chrX 30385408 30385788 -136264508 + LTRIS4 LTR ERV1 124 507 0 3 816 2297 144 17 22 chrX 30385915 30386326 -136263970 + RLTR9E LTR ERVK 1 409 0 3 816 639 214 17 72 chrX 30386328 30386595 -136263701 + MMETn-int LTR ERVK 2 317 -2997 3 816 308 100 0 20 chrX 30386650 30386701 -136263595 + ETnERV2-int LTR ERVK 2091 2140 -5104 3 816 272 111 0 0 chrX 30387151 30387196 -136263100 + RMER16-int LTR ERVK 144 188 -5218 3 816 597 165 26 9 chrX 30387271 30387387 -136262909 + RMER16-int LTR ERVK 1089 1206 -4200 3 816 564 229 12 73 chrX 30387404 30387569 -136262727 + ETnERV2-int LTR ERVK 2454 2608 -4798 3 816 20715 114 22 22 chrX 30387569 30390237 -136260059 + ETnERV2-int LTR ERVK 3055 5779 -1627 3 816 1319 100 16 0 chrX 30390237 30390427 -136259869 + B2_Mm1t SINE B2 1 193 0 3 816 20715 158 19 46 chrX 30390427 30391177 -136259119 + ETnERV2-int LTR ERVK 5780 6221 -1185 3 817 24919 96 9 8 chrX 30441205 30446297 -136203999 - L1Md_A LINE L1 -563 5320 238 3 817 982 183 168 0 chrX 30446297 30446488 -136203808 - URR1B DNA MER1_type -2 223 1 3 817 432 163 46 6 chrX 30446510 30446683 -136203613 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 817 726 309 61 61 chrX 30446687 30446983 -136203313 - MT2A LTR ERVL -65 468 173 3 817 1861 159 16 86 chrX 30447038 30447410 -136202886 - ORR1B1 LTR MaLR -8 386 41 3 817 487 365 28 24 chrX 30447755 30447968 -136202328 + MER76 LTR ERVL 1 214 -477 3 817 7658 53 10 0 chrX 30448065 30448949 -136201347 - RLTR13B1 LTR ERVK 0 893 1 3 817 248 254 0 48 chrX 30449312 30449374 -136200922 + ID4 SINE ID 2 60 -23 3 817 30192 90 12 6 chrX 30450225 30455230 -136195066 + L1Md_Gf LINE L1 278 5413 -473 3 817 3536 62 73 0 chrX 30455230 30455694 -136194602 + L1Md_F2 LINE L1 5089 5586 -297 3 817 8121 72 1 2 chrX 30455694 30456691 -136193605 + L1Md_F2 LINE L1 5587 6582 0 3 817 207 0 0 0 chrX 30456751 30456774 -136193522 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 3 817 250 333 36 0 chrX 30457013 30457097 -136193199 + RLTR19-int LTR ERVK 4389 4475 -1662 3 817 531 171 220 39 chrX 30457174 30457356 -136192940 + Lx9 LINE L1 7423 7637 -7 3 817 446 300 0 8 chrX 30457636 30457757 -136192539 - B1F SINE Alu -1 148 29 3 817 283 314 11 44 chrX 30457782 30457872 -136192424 - MLT1-int LTR MaLR -346 1025 939 3 817 511 264 65 58 chrX 30457897 30458174 -136192122 + L1M4 LINE L1 5511 5789 -395 3 817 496 148 198 0 chrX 30458342 30458443 -136191853 - ORR1B2 LTR MaLR -246 121 1 3 817 875 268 15 108 chrX 30458485 30458832 -136191464 + Lx7 LINE L1 7235 7550 -146 3 817 1215 56 7 0 chrX 30458832 30458974 -136191322 - B1_Mm SINE Alu 0 147 5 3 817 875 268 15 108 chrX 30458974 30459099 -136191197 + Lx7 LINE L1 7551 7663 -33 3 817 573 192 144 29 chrX 30459103 30459354 -136190942 + ORR1D2-int LTR MaLR 1216 1563 -17 3 817 584 277 65 5 chrX 30459367 30459552 -136190744 + ORR1D2 LTR MaLR 158 353 -17 3 817 332 74 164 18 chrX 30459820 30459875 -136190421 + RMER10B LTR ERVL 1 63 -335 3 817 352 231 50 33 chrX 30460087 30460208 -136190088 + RMER17C-int LTR ERVK 2972 3094 -144 3 817 1543 156 75 117 chrX 30460274 30460702 -136189594 - RMER17C LTR ERVK 0 410 1 3 817 3160 21 0 0 chrX 30460747 30461084 -136189212 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 817 56246 22 17 7 chrX 30461084 30467490 -136182806 - IAPEz-int LTR ERVK 0 6481 8 3 817 3099 24 3 0 chrX 30467490 30467826 -136182470 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 817 685 209 6 65 chrX 30467858 30468027 -136182269 - MMETn-int LTR ERVK -4676 168 10 3 817 2376 159 17 22 chrX 30468036 30468447 -136181849 - RLTR9E LTR ERVK 0 409 1 3 817 1728 161 44 42 chrX 30468574 30468957 -136181339 - LTRIS4 LTR ERV1 0 507 124 3 817 200 61 61 0 chrX 30469248 30469281 -136181015 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 817 357 271 74 34 chrX 30469332 30469481 -136180815 + RLTR6-int LTR ERV1 7573 7727 -51 3 817 3091 109 75 2 chrX 30469566 30470062 -136180234 + RLTR47_MM LTR ERV1 1 532 0 3 817 1388 220 56 5 chrX 30470062 30470392 -136179904 + ORR1B1-int LTR MaLR 325 728 -852 3 817 900 225 76 29 chrX 30470396 30470606 -136179690 - RLTR41 LTR ERV1 0 446 227 3 817 18817 162 25 23 chrX 30471065 30472999 -136177297 + L1_Mus3 LINE L1 361 2277 -3606 3 817 2733 84 6 3 chrX 30472999 30473344 -136176952 - ORR1A1 LTR MaLR 0 346 1 3 817 18817 152 19 20 chrX 30473344 30475659 -136174637 + L1_Mus3 LINE L1 2278 4613 -1270 3 817 6899 113 12 2 chrX 30475677 30476785 -136173511 + L1_Mus3 LINE L1 5515 6638 0 3 817 283 129 42 31 chrX 30477399 30477495 -136172801 + (TA)n Simple_repeat Simple_repeat 1 97 0 3 817 222 62 0 0 chrX 30478346 30478378 -136171918 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 3 817 4110 222 42 13 chrX 30481590 30482466 -136167830 + RMER19B LTR ERVK 1 902 0 3 817 24 0 0 0 chrX 30483086 30483110 -136167186 + AT_rich Low_complexity Low_complexity 1 24 0 3 817 2842 194 30 13 chrX 30483110 30483644 -136166652 - Lx4A LINE L1 -1 7057 6515 3 817 6565 221 112 63 chrX 30483655 30484465 -136165831 - Lx4A LINE L1 -1183 5875 4928 3 817 974 154 0 0 chrX 30484465 30484601 -136165695 + B1_Mus2 SINE Alu 5 140 -7 4 817 297 0 0 0 chrX 30484608 30484641 -136165655 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 4 817 6565 229 122 66 chrX 30484641 30484719 -136165577 - Lx4A LINE L1 -950 4927 4833 3 817 1437 102 0 5 chrX 30484719 30484907 -136165389 - B2_Mm2 SINE B2 -8 187 1 4 817 6565 229 122 66 chrX 30484907 30487040 -136163256 - Lx4A LINE L1 -1045 4832 2558 3 817 285 98 0 0 chrX 30487041 30487082 -136163214 + (T)n Simple_repeat Simple_repeat 1 41 0 4 817 35194 77 4 3 chrX 30487506 30493788 -136156508 - L1Md_F2 LINE L1 -1 6584 199 4 817 1507 133 16 8 chrX 30493790 30494048 -136156248 - Lx4A LINE L1 -3319 2567 2308 3 817 2055 272 65 51 chrX 30494055 30494687 -136155609 - RLTR26 LTR ERVK 0 642 2 4 817 4608 192 65 9 chrX 30494690 30495532 -136154764 - L1VL4 LINE L1 -3582 2304 1411 4 817 2338 99 3 0 chrX 30495532 30495844 -136154452 - L1_Mus1 LINE L1 0 6567 6255 4 817 4608 220 54 5 chrX 30495844 30496367 -136153929 - L1VL4 LINE L1 -4476 1410 859 4 817 9839 114 275 18 chrX 30496804 30497721 -136152575 - L1_Mur2 LINE L1 -2107 3770 2851 4 817 2163 190 45 2 chrX 30497721 30498148 -136152148 + BGLII_A LTR ERVK 1 445 0 4 817 9839 129 220 11 chrX 30498148 30499993 -136150303 - L1_Mur2 LINE L1 -3027 2850 383 4 817 2811 215 38 53 chrX 30500019 30500307 -136149989 + RMER6D LTR ERVK 16 314 -406 1 817 1888 140 95 6 chrX 30500307 30500645 -136149651 - RLTR9A LTR ERVK 0 368 1 2 817 2811 215 38 53 chrX 30500645 30500703 -136149593 + RMER6D LTR ERVK 315 362 -358 1 817 360 0 0 0 chrX 30500703 30500743 -136149553 + (TGG)n Simple_repeat Simple_repeat 2 41 0 3 817 2811 215 38 53 chrX 30500743 30501111 -136149185 + RMER6D LTR ERVK 363 720 0 1 817 252 348 58 57 chrX 30501399 30501988 -136148308 - L2b LINE L2 -40 3386 2796 4 817 23 33 0 0 chrX 30502032 30502062 -136148234 + AT_rich Low_complexity Low_complexity 1 30 0 5 817 1606 138 101 36 chrX 30502765 30503102 -136147194 - ORR1B2 LTR MaLR -8 359 1 6 817 567 231 35 0 chrX 30503885 30504028 -136146268 + B1_Mur1 SINE Alu 2 149 0 7 817 3454 138 70 10 chrX 30504126 30504245 -136146051 - Lx LINE L1 0 6654 6536 8 817 204 40 0 0 chrX 30504245 30504270 -136146026 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 9 817 3454 138 70 10 chrX 30504270 30504752 -136145544 - Lx LINE L1 -119 6535 6018 8 817 1746 191 0 9 chrX 30504752 30505080 -136145216 - ORR1A3 LTR MaLR -1 325 1 1 817 2971 134 46 8 chrX 30505080 30505597 -136144699 - ORR1A3-int LTR MaLR 0 1963 1427 1 817 866 256 111 12 chrX 30505596 30505849 -136144447 + ORR1D1 LTR MaLR 97 374 0 1 817 613 271 28 11 chrX 30505849 30506026 -136144270 - MTE2b LTR MaLR -195 184 5 1 817 430 261 59 29 chrX 30506242 30506412 -136143884 + MER106B DNA MER1_type 84 258 -801 1 817 277 267 142 53 chrX 30506760 30507140 -136143156 + MER106B DNA MER1_type 445 858 -201 1 817 982 95 0 45 chrX 30507592 30507746 -136142550 - B1_Mus1 SINE Alu -1 147 1 1 817 531 45 0 0 chrX 30507823 30507889 -136142407 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 817 613 332 68 0 chrX 30507956 30508161 -136142135 - B4A SINE B4 -73 219 1 1 817 765 192 198 0 chrX 30508262 30508449 -136141847 + URR1A DNA MER1_type 3 226 0 1 817 432 218 59 27 chrX 30508520 30508641 -136141655 + MTD LTR MaLR 282 405 -14 1 817 549 170 27 0 chrX 30508697 30508809 -136141487 + ORR1C2 LTR MaLR 1 115 -263 1 817 1990 96 64 72 chrX 30508813 30509172 -136141124 - RLTR10B2 LTR ERVK -9 356 1 2 817 1463 128 75 0 chrX 30509173 30509439 -136140857 + ORR1C2 LTR MaLR 95 380 -4 1 817 3057 124 12 37 chrX 30510360 30510847 -136139449 + MT2C_Mm LTR ERVL 1 475 0 2 817 762 259 41 86 chrX 30511122 30511684 -136138612 + L1_Mur3 LINE L1 894 1431 -4449 2 817 602 147 139 0 chrX 30511695 30511824 -136138472 + Lx5 LINE L1 6904 7050 0 2 817 1915 109 3 46 chrX 30511912 30512258 -136138038 + RLTR13A LTR ERVK 1 331 -524 2 817 2277 84 132 11 chrX 30512258 30512606 -136137690 + RLTR10 LTR ERVK 1 390 0 2 817 5956 29 0 35 chrX 30512606 30513321 -136136975 + RLTR10-int LTR ERVK 302 991 -996 2 817 703 327 64 10 chrX 30513378 30513770 -136136526 + IAP-d-int LTR ERVK 738 1150 -5392 2 817 8590 34 1 7 chrX 30513852 30514855 -136135441 + RLTR10-int LTR ERVK 990 1986 -1 2 817 2280 92 123 6 chrX 30514855 30515204 -136135092 + RLTR10 LTR ERVK 1 390 0 2 817 294 289 0 0 chrX 30515638 30515721 -136134575 + MurSAT1 Satellite Satellite 5 87 -33 2 817 738 140 72 14 chrX 30516953 30517091 -136133205 + B1_Mus2 SINE Alu 2 147 0 2 817 725 142 7 0 chrX 30517105 30517246 -136133050 + (GAAA)n Simple_repeat Simple_repeat 3 144 0 2 817 33075 86 3 1 chrX 30517576 30523318 -136126978 + L1Md_F2 LINE L1 98 5586 -297 3 817 8128 44 11 0 chrX 30523319 30524297 -136125999 + L1Md_F2 LINE L1 5588 6576 -6 3 817 807 151 7 20 chrX 30524354 30524503 -136125793 + B1_Mus1 SINE Alu 2 148 0 3 817 352 104 15 15 chrX 30524504 30524572 -136125724 + (GAAA)n Simple_repeat Simple_repeat 2 69 0 3 817 186 71 0 0 chrX 30524800 30524828 -136125468 + (TTG)n Simple_repeat Simple_repeat 1 28 0 3 817 488 56 28 0 chrX 30524940 30525011 -136125285 + (GAAA)n Simple_repeat Simple_repeat 2 74 0 3 817 743 141 8 8 chrX 30525112 30525234 -136125062 + RLTR1B-int LTR ERV1 547 668 -2631 3 817 1546 49 236 4 chrX 30525243 30525468 -136124828 + RLTR1B-int LTR ERV1 3023 3299 0 3 817 2072 65 209 3 chrX 30525468 30525808 -136124488 + RLTR1B LTR ERV1 1 410 -102 3 817 617 161 34 0 chrX 30525812 30525930 -136124366 + RLTR1B LTR ERV1 343 464 -48 3 817 339 136 0 0 chrX 30526088 30526147 -136124149 + (T)n Simple_repeat Simple_repeat 1 59 0 3 817 292 49 24 0 chrX 30526171 30526212 -136124084 + RLTR1B LTR ERV1 471 512 0 3 817 14780 82 22 29 chrX 30526212 30528420 -136121876 + RLTR1B-int LTR ERV1 1 2109 -1190 3 817 5346 48 37 0 chrX 30528417 30529058 -136121238 + RLTR1B-int LTR ERV1 2635 3299 0 3 817 2717 66 145 139 chrX 30529058 30529567 -136120729 + RLTR1B LTR ERV1 1 512 0 3 817 555 203 35 70 chrX 30529567 30529710 -136120586 + RMER16-int LTR ERVK 1308 1445 -3961 3 817 1722 253 94 6 chrX 30529701 30530423 -136119873 + MuRRS4-int LTR ERV1 760 1545 -3518 3 817 6256 82 121 117 chrX 30530439 30531589 -136118707 + RLTR1B-int LTR ERV1 1125 2278 -1021 4 817 754 277 149 8 chrX 30531598 30531860 -136118436 - RLTR26 LTR ERVK -342 300 2 4 817 4496 195 63 5 chrX 30531863 30532703 -136117593 - L1VL4 LINE L1 -3582 2304 1416 4 817 2155 103 3 0 chrX 30532703 30533015 -136117281 - L1_Mus1 LINE L1 0 6567 6255 4 817 4496 221 53 3 chrX 30533015 30533538 -136116758 - L1VL4 LINE L1 -4471 1415 859 4 817 9614 117 277 20 chrX 30533968 30534888 -136115408 - L1_Mur2 LINE L1 -2107 3770 2851 4 817 1913 202 45 2 chrX 30534888 30535315 -136114981 + BGLII_A LTR ERVK 1 445 0 4 817 9614 133 222 13 chrX 30535315 30537158 -136113138 - L1_Mur2 LINE L1 -3027 2850 383 4 817 2698 216 45 55 chrX 30537184 30537471 -136112825 + RMER6D LTR ERVK 16 314 -406 4 817 1779 151 92 3 chrX 30537471 30537809 -136112487 - RLTR9A LTR ERVK 0 368 1 4 817 2698 216 45 55 chrX 30537809 30537867 -136112429 + RMER6D LTR ERVK 315 362 -358 4 817 360 0 0 0 chrX 30537867 30537907 -136112389 + (TGG)n Simple_repeat Simple_repeat 2 41 0 4 817 2698 216 45 55 chrX 30537907 30538272 -136112024 + RMER6D LTR ERVK 363 720 0 4 817 237 365 54 47 chrX 30538873 30539149 -136111147 - L2 LINE L2 -346 3073 2796 4 817 23 33 0 0 chrX 30539193 30539223 -136111073 + AT_rich Low_complexity Low_complexity 1 30 0 5 818 1640 135 101 36 chrX 30539927 30540264 -136110032 - ORR1B2 LTR MaLR -8 359 1 5 818 538 234 35 0 chrX 30541051 30541192 -136109104 + B1_Mur1 SINE Alu 2 147 -2 5 818 3408 139 71 15 chrX 30541283 30541402 -136108894 - Lx LINE L1 0 6654 6536 5 818 204 40 0 0 chrX 30541402 30541427 -136108869 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 5 818 3408 139 71 15 chrX 30541427 30541911 -136108385 - Lx LINE L1 -119 6535 6019 5 818 1756 188 0 9 chrX 30541911 30542239 -136108057 - ORR1A3 LTR MaLR -1 325 1 5 818 6899 159 70 16 chrX 30542239 30543712 -136106584 - ORR1A3-int LTR MaLR 0 1963 412 5 818 3929 31 100 18 chrX 30543714 30544272 -136106024 + RLTR6_Mm LTR ERV1 1 604 -50 5 818 3770 89 64 37 chrX 30544273 30545354 -136104942 + MMVL30-int LTR ERV1 1 747 -2951 5 818 17186 40 39 7 chrX 30545702 30548537 -136101759 + MMVL30-int LTR ERV1 772 3698 0 5 818 3812 28 104 19 chrX 30548537 30549077 -136101219 + RLTR6_Mm LTR ERV1 1 586 -68 5 818 2372 122 32 2 chrX 30549075 30549476 -136100820 - ORR1A3-int LTR MaLR -1550 413 1 5 818 1914 132 29 45 chrX 30549478 30549873 -136100423 - MT2B2 LTR ERVL -2 582 155 5 818 269 333 68 27 chrX 30549873 30550021 -136100275 - RMER15 LTR ERVL 0 575 422 5 818 1834 159 13 0 chrX 30550406 30550720 -136099576 - ORR1A3 LTR MaLR -8 318 1 5 818 464 296 26 68 chrX 30550788 30550980 -136099316 - MTE2b LTR MaLR -15 364 181 6 818 1430 222 87 12 chrX 30550983 30551329 -136098967 + ORR1D1 LTR MaLR 3 374 0 6 818 625 277 28 11 chrX 30551329 30551506 -136098790 - MTE2b LTR MaLR -195 184 5 6 818 458 255 59 29 chrX 30551722 30551892 -136098404 + MER106B DNA MER1_type 84 258 -801 6 818 313 247 104 68 chrX 30552233 30552541 -136097755 + MER106B DNA MER1_type 445 763 -296 6 818 1075 102 0 0 chrX 30553069 30553216 -136097080 - B1_Mus1 SINE Alu -1 147 1 6 818 456 67 0 0 chrX 30553293 30553353 -136096943 + (TG)n Simple_repeat Simple_repeat 2 61 0 6 818 613 332 68 0 chrX 30553420 30553625 -136096671 - B4A SINE B4 -73 219 1 6 818 740 198 198 0 chrX 30553726 30553913 -136096383 + URR1A DNA MER1_type 3 226 0 6 818 407 236 92 11 chrX 30553984 30554109 -136096187 + MTD LTR MaLR 258 405 -14 6 818 535 170 27 0 chrX 30554160 30554272 -136096024 + ORR1C2 LTR MaLR 1 115 -263 6 818 2065 78 64 72 chrX 30554276 30554635 -136095661 - RLTR10B2 LTR ERVK -9 356 1 6 818 1410 143 75 0 chrX 30554636 30554902 -136095394 + ORR1C2 LTR MaLR 95 380 -4 6 818 3082 122 12 37 chrX 30555823 30556310 -136093986 + MT2C_Mm LTR ERVL 1 475 0 7 818 556 270 34 92 chrX 30556587 30557154 -136093142 + L1_Mur3 LINE L1 894 1429 -4451 7 818 560 146 131 0 chrX 30557167 30557297 -136092999 + Lx5 LINE L1 6904 7050 0 7 818 216 0 0 0 chrX 30557365 30557389 -136092907 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 7 818 5364 99 13 54 chrX 30557406 30558302 -136091994 + RLTR13A3 LTR ERVK 119 978 0 7 818 990 129 7 0 chrX 30558337 30558484 -136091812 - B1_Mus1 SINE Alu 0 148 1 7 818 2013 226 28 46 chrX 30558486 30559199 -136091097 + L1_Mur3 LINE L1 1459 2158 -3722 7 818 6836 95 13 3 chrX 30559205 30560230 -136090066 + L1_Mus3 LINE L1 5604 6638 0 7 818 466 140 10 10 chrX 30560253 30560354 -136089942 + GA-rich Low_complexity Low_complexity 2 102 0 7 818 2703 232 45 68 chrX 30560357 30560510 -136089786 + L1_Mur3 LINE L1 3047 3187 -2693 7 818 985 137 21 62 chrX 30560510 30560704 -136089592 + B2_Mm2 SINE B2 2 187 -8 7 818 2703 232 45 68 chrX 30560704 30561125 -136089171 + L1_Mur3 LINE L1 3188 3620 -2260 7 818 6114 135 20 15 chrX 30561125 30562143 -136088153 - RLTR13D5 LTR ERVK 0 1023 1 7 818 2703 232 45 68 chrX 30562143 30562424 -136087872 + L1_Mur3 LINE L1 3621 3889 -1991 7 818 913 173 0 0 chrX 30562424 30562574 -136087722 - B1_Mur4 SINE Alu 0 150 1 8 818 2703 232 45 68 chrX 30562574 30562768 -136087528 + L1_Mur3 LINE L1 3890 4073 -1807 7 818 718 174 0 15 chrX 30562772 30562906 -136087390 + MT2B LTR ERVL 1 132 -469 8 818 786 113 0 0 chrX 30562961 30563076 -136087220 + ORR1A2 LTR MaLR 213 327 0 8 818 2361 82 0 0 chrX 30563444 30563784 -136086512 - L1_Mm LINE L1 -1354 4529 4190 8 818 5553 112 17 5 chrX 30563802 30564644 -136085652 + L1_Mus3 LINE L1 5787 6638 0 8 818 525 273 148 10 chrX 30564662 30564973 -136085323 + L1MD2 LINE L1 5638 5991 -368 8 818 22 0 0 0 chrX 30565229 30565251 -136085045 + AT_rich Low_complexity Low_complexity 1 22 0 8 818 660 26 0 0 chrX 30567417 30567495 -136082801 + (TC)n Simple_repeat Simple_repeat 2 79 0 8 818 591 78 0 0 chrX 30567495 30567584 -136082712 + (TG)n Simple_repeat Simple_repeat 1 90 0 8 818 189 0 0 0 chrX 30567650 30567671 -136082625 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 8 818 828 281 48 50 chrX 30567850 30568199 -136082097 - MTEa LTR MaLR 0 379 13 9 818 21 0 0 0 chrX 30568239 30568260 -136082036 + AT_rich Low_complexity Low_complexity 1 21 0 9 818 916 170 0 0 chrX 30568260 30568401 -136081895 + B1_Mur4 SINE Alu 1 141 -9 9 818 1026 92 13 0 chrX 30568977 30569130 -136081166 - L1_Mus1 LINE L1 -737 5146 4992 9 818 7105 77 4 32 chrX 30569127 30569940 -136080356 + L1_Mus1 LINE L1 5154 5932 -635 9 818 4337 126 125 26 chrX 30569940 30570747 -136079549 + RMER17D LTR ERVK 1 887 -2 9 818 7105 65 7 12 chrX 30570747 30571386 -136078910 + L1_Mus1 LINE L1 5933 6567 0 9 818 252 0 0 0 chrX 30571412 30571440 -136078856 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 9 818 1049 156 166 22 chrX 30571893 30572122 -136078174 - Lx5 LINE L1 -1 7049 6788 9 818 4620 163 9 2 chrX 30572233 30573107 -136077189 + L1_Mur2 LINE L1 3947 4826 -1051 9 818 4776 96 37 14 chrX 30573103 30573878 -136076418 - L1_Mur2 LINE L1 -258 5619 4827 9 818 269 161 18 0 chrX 30574386 30574442 -136075854 - MERVL_2A-int LTR ERVL -3496 2265 2209 9 818 2010 206 77 2 chrX 30574479 30574921 -136075375 + MERVL_2A-int LTR ERVL 3130 3604 -2157 1 818 28367 100 30 9 chrX 30574921 30577420 -136072876 + L1Md_F2 LINE L1 951 3476 -2407 1 818 318 26 0 0 chrX 30577420 30577459 -136072837 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 1 818 28367 100 35 9 chrX 30577459 30578227 -136072069 + L1Md_F2 LINE L1 3477 4350 -1533 1 818 3305 28 15 0 chrX 30578227 30578617 -136071679 - MTA_Mm LTR MaLR 0 396 1 1 818 28367 101 36 7 chrX 30578617 30580576 -136069720 + L1Md_F2 LINE L1 4351 6320 -262 1 818 716 123 33 46 chrX 30580588 30580741 -136069555 + L1Md_F2 LINE L1 6430 6580 -4 1 818 491 286 66 123 chrX 30580941 30581418 -136068878 + L1VL1 LINE L1 27 395 -6027 1 818 492 225 50 14 chrX 30581424 30581602 -136068694 + L1Md_T LINE L1 527 820 -5799 1 818 24577 65 164 1 chrX 30581605 30585740 -136064556 + L1Md_T LINE L1 773 5589 -297 1 818 8342 38 0 0 chrX 30585740 30586734 -136063562 + L1Md_T LINE L1 5590 6583 -2 1 818 251 0 0 104 chrX 30586734 30586782 -136063514 + L1Md_T LINE L1 6537 6579 -3 1 818 21728 124 13 13 chrX 30586812 30591379 -136058917 + L1_Mus1 LINE L1 2001 6567 0 1 818 6592 111 12 2 chrX 30591395 30592852 -136057444 + L1_Mus2 LINE L1 5092 6565 -1 1 818 840 188 113 7 chrX 30592870 30593154 -136057142 + L1_Mur3 LINE L1 3073 3386 -2494 1 818 5145 190 40 47 chrX 30593160 30594489 -136055807 + L1_Mur3 LINE L1 4418 5736 -144 1 818 589 334 85 31 chrX 30595668 30596150 -136054146 - Lx8 LINE L1 -236 7237 6730 1 818 1290 305 79 21 chrX 30596165 30596735 -136053561 - Lx8 LINE L1 -800 6673 6071 1 818 727 280 6 44 chrX 30597083 30597442 -136052854 + RMER19A LTR ERVK 1 259 -478 1 818 348 24 0 0 chrX 30597650 30597691 -136052605 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 818 377 277 0 61 chrX 30598044 30598209 -136052087 + GA-rich Low_complexity Low_complexity 4 158 0 1 818 885 291 77 35 chrX 30600681 30601019 -136049277 - MTE2a LTR MaLR 0 379 28 1 818 467 288 61 7 chrX 30601021 30601168 -136049128 - MTE2a-int LTR MaLR 0 1580 1426 1 818 728 183 29 23 chrX 30601169 30601342 -136048954 - L1_Mur3 LINE L1 -1118 4762 4589 1 818 29 0 0 0 chrX 30603611 30603640 -136046656 + AT_rich Low_complexity Low_complexity 1 29 0 1 818 13350 135 11 8 chrX 30603675 30606767 -136043529 - L1_Mus3 LINE L1 -6 6632 3531 1 818 913 105 0 7 chrX 30606762 30606906 -136043390 - L1_Mus3 LINE L1 -3500 2383 2241 1 818 649 303 25 21 chrX 30607382 30607665 -136042631 + RLTR15 LTR ERVK 3 286 -73 1 818 1585 235 41 0 chrX 30607732 30608051 -136042245 + ORR1B1 LTR MaLR 20 351 -43 1 818 464 186 0 183 chrX 30608053 30608217 -136042079 + B1_Mus2 SINE Alu 1 134 -13 1 818 231 197 14 27 chrX 30608224 30608297 -136041999 + (CAGAGA)n Simple_repeat Simple_repeat 4 75 0 1 818 405 0 0 0 chrX 30608297 30608342 -136041954 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 818 207 0 0 0 chrX 30608344 30608367 -136041929 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 818 393 109 0 0 chrX 30608936 30609000 -136041296 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 1 818 255 238 200 38 chrX 30609092 30609197 -136041099 + RLTR6_Mm LTR ERV1 1 122 -532 1 818 1982 121 258 29 chrX 30609199 30609649 -136040647 + RLTR6_Mm LTR ERV1 37 589 -65 1 818 27227 34 27 0 chrX 30609649 30613892 -136036404 + RLTR6-int LTR ERV1 1 4414 -3364 1 818 7335 38 1 0 chrX 30613894 30614739 -136035557 + RLTR6-int LTR ERV1 6933 7778 0 1 818 226 185 239 30 chrX 30614739 30614806 -136035490 + RLTR6_Mm LTR ERV1 1 81 -573 1 818 1694 138 272 47 chrX 30614846 30615295 -136035001 + RLTR6_Mm LTR ERV1 37 586 -68 1 818 436 252 71 7 chrX 30615293 30615433 -136034863 + ORR1D2 LTR MaLR 205 353 -17 1 818 294 49 0 24 chrX 30615702 30615744 -136034552 + RMER10B LTR ERVL 1 41 -357 1 818 325 212 83 66 chrX 30615969 30616090 -136034206 + RMER17C-int LTR ERVK 2972 3094 -144 1 818 1360 161 75 117 chrX 30616156 30616584 -136033712 - RMER17C LTR ERVK 0 410 1 1 818 1414 186 182 6 chrX 30616599 30616934 -136033362 + RMER10B LTR ERVL 5 398 0 1 818 1157 167 22 26 chrX 30617199 30617372 -136032924 - URR1A DNA MER1_type 0 226 52 1 818 678 65 0 0 chrX 30617372 30617464 -136032832 + (TA)n Simple_repeat Simple_repeat 2 93 0 1 818 1157 167 22 26 chrX 30617464 30617517 -136032779 - URR1A DNA MER1_type -175 51 1 1 818 29 0 0 0 chrX 30618500 30618529 -136031767 + AT_rich Low_complexity Low_complexity 1 29 0 1 818 794 189 13 20 chrX 30618764 30618915 -136031381 - B1_Mur4 SINE Alu 0 150 1 1 818 385 78 130 0 chrX 30619191 30619268 -136031028 + ORR1A2 LTR MaLR 1 87 -240 1 818 1738 110 250 0 chrX 30619270 30619598 -136030698 - ORR1A2-int LTR MaLR -535 1428 1019 1 818 273 350 51 0 chrX 30619603 30619720 -136030576 + ETnERV2-int LTR ERVK 7074 7196 -210 1 818 3813 189 78 16 chrX 30619993 30620571 -136029725 - ORR1A2-int LTR MaLR -936 1027 389 1 818 2647 68 6 161 chrX 30620571 30620850 -136029446 - MTB LTR MaLR 0 400 187 1 818 1124 82 0 0 chrX 30620850 30620996 -136029300 - B1_Mm SINE Alu 0 147 2 1 818 2647 68 6 161 chrX 30620996 30621188 -136029108 - MTB LTR MaLR -214 186 2 1 818 3813 189 78 16 chrX 30621188 30621576 -136028720 - ORR1A2-int LTR MaLR -1575 388 1 1 818 2195 125 25 0 chrX 30621576 30621895 -136028401 - ORR1A2 LTR MaLR 0 327 1 1 818 1565 134 11 0 chrX 30621895 30622170 -136028126 + ORR1A2-int LTR MaLR 1686 1963 0 1 818 1909 159 3 58 chrX 30622170 30622516 -136027780 + ORR1A2 LTR MaLR 1 327 0 1 818 198 389 28 55 chrX 30622734 30623025 -136027271 + L2b LINE L2 2791 3073 -346 1 818 212 342 66 58 chrX 30623219 30623340 -136026956 + L2b LINE L2 3214 3335 -40 1 818 2477 222 72 37 chrX 30623646 30623970 -136026326 - RMER6D LTR ERVK -13 707 366 1 818 321 68 0 0 chrX 30623970 30624014 -136026282 + (CCA)n Simple_repeat Simple_repeat 3 46 0 1 818 2477 222 72 37 chrX 30624014 30624071 -136026225 - RMER6D LTR ERVK -355 365 315 1 818 1848 149 95 6 chrX 30624071 30624409 -136025887 + RLTR9A LTR ERVK 1 368 0 1 818 2477 222 72 37 chrX 30624409 30624695 -136025601 - RMER6D LTR ERVK -406 314 16 1 818 274 139 0 0 chrX 30624721 30624764 -136025532 + L1_Mur2 LINE L1 151 193 -6519 1 818 299 68 0 0 chrX 30624781 30624825 -136025471 + RLTR1 LTR ERV1 581 624 0 1 818 9109 137 240 10 chrX 30624825 30626619 -136023677 + L1_Mur2 LINE L1 410 2850 -3027 1 818 2018 184 47 5 chrX 30626619 30627046 -136023250 - BGLII_A LTR ERVK 0 445 1 1 818 9109 123 295 16 chrX 30627046 30627935 -136022361 + L1_Mur2 LINE L1 2851 3769 -2108 1 818 3673 211 51 15 chrX 30628374 30628785 -136021511 + Lx4A LINE L1 859 1422 -2492 1 818 2010 130 3 0 chrX 30628785 30629093 -136021203 + L1_Mus1 LINE L1 6259 6567 0 1 818 4126 179 45 12 chrX 30629093 30629953 -136020343 + Lx4A LINE L1 1423 2304 -3582 1 818 1491 281 73 62 chrX 30629954 30630505 -136019791 + RLTR26 LTR ERVK 1 557 -85 1 818 9409 174 20 19 chrX 30630507 30630668 -136019628 + Lx4A LINE L1 2306 2451 -3435 1 818 2941 84 5 2 chrX 30630668 30631063 -136019233 + MTA_Mm LTR MaLR 1 396 0 1 818 9409 174 20 19 chrX 30631063 30632855 -136017441 + Lx4A LINE L1 2452 4260 -1626 1 818 1162 144 0 5 chrX 30632855 30633044 -136017252 + B2_Mm2 SINE B2 1 188 -7 1 818 4664 149 47 3 chrX 30633064 30633912 -136016384 + Lx4A LINE L1 4871 5875 -1183 1 818 2713 212 32 14 chrX 30633905 30634460 -136015836 + Lx4A LINE L1 6493 7057 -1 1 818 24 0 0 0 chrX 30634460 30634484 -136015812 + AT_rich Low_complexity Low_complexity 1 24 0 1 818 3672 214 46 14 chrX 30635113 30635961 -136014335 - RMER19B LTR ERVK -27 875 1 1 818 3197 52 12 19 chrX 30638859 30639273 -136011023 - IAPLTR2a LTR ERVK 0 411 1 1 818 6276 65 13 13 chrX 30639275 30640102 -136010194 - IAPEz-int LTR ERVK -2 6479 5653 1 818 10849 59 51 31 chrX 30640097 30641673 -136008623 - IAPEz-int LTR ERVK -4781 1700 168 1 818 226 267 0 0 chrX 30641673 30641718 -136008578 - RLTR27 LTR ERVK -34 275 231 1 818 969 124 30 92 chrX 30641725 30641938 -136008358 - IAPEz-int LTR ERVK -1785 202 3 1 818 3223 47 12 19 chrX 30641940 30642354 -136007942 - IAPLTR2a LTR ERVK 0 411 1 1 818 2680 124 50 38 chrX 30642768 30643244 -136007052 + RLTR45 LTR ERVK 1 482 0 1 818 2854 97 9 19 chrX 30643792 30644223 -136006073 - L1Md_F2 LINE L1 0 6582 6156 1 818 1031 92 0 21 chrX 30644468 30644613 -136005683 + B1_Mus2 SINE Alu 1 142 -5 1 818 207 0 0 0 chrX 30644628 30644651 -136005645 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 818 974 227 140 48 chrX 30644736 30644999 -136005297 + ORR1B2 LTR MaLR 1 292 -75 1 818 2255 127 16 69 chrX 30644999 30645432 -136004864 - MT2B LTR ERVL 0 601 192 1 818 1152 76 7 0 chrX 30645464 30645609 -136004687 - B1_Mus2 SINE Alu 0 147 2 1 818 1041 8 0 0 chrX 30645683 30645800 -136004496 - L1Md_A LINE L1 -249 6333 6217 1 818 398 219 31 20 chrX 30646403 30646501 -136003795 - RLTR23 LTR ERV1 0 430 332 1 818 333 329 38 31 chrX 30646879 30647039 -136003257 - Lx9 LINE L1 -218 7426 7266 1 818 1123 197 98 0 chrX 30647087 30647392 -136002904 - Lx9 LINE L1 -1 7643 7309 1 818 413 75 104 0 chrX 30647393 30647460 -136002836 + RLTR11B LTR ERVK 3 76 -377 1 819 2472 102 2 2 chrX 30697756 30698134 -135952162 - L1_Mm LINE L1 -1558 4582 4190 1 819 5529 112 17 5 chrX 30698145 30698987 -135951309 + L1_Mus3 LINE L1 5787 6638 0 1 819 597 276 148 10 chrX 30699005 30699316 -135950980 + L1MD2 LINE L1 5638 5991 -368 1 819 22 0 0 0 chrX 30699573 30699595 -135950701 + AT_rich Low_complexity Low_complexity 1 22 0 1 819 468 0 0 0 chrX 30701761 30701813 -135948483 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 819 678 62 0 0 chrX 30701813 30701908 -135948388 + (TG)n Simple_repeat Simple_repeat 1 96 0 1 819 189 0 0 0 chrX 30701974 30701995 -135948301 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1 819 818 285 48 50 chrX 30702174 30702523 -135947773 - MTEa LTR MaLR 0 379 13 1 819 21 0 0 0 chrX 30702563 30702584 -135947712 + AT_rich Low_complexity Low_complexity 1 21 0 1 819 910 170 0 0 chrX 30702584 30702725 -135947571 + B1_Mur4 SINE Alu 1 141 -9 1 819 205 288 0 0 chrX 30702888 30702947 -135947349 + A-rich Low_complexity Low_complexity 1 59 0 1 819 1079 92 13 0 chrX 30703302 30703455 -135946841 - L1_Mus1 LINE L1 -737 5146 4992 1 819 7462 84 4 31 chrX 30703452 30704265 -135946031 + L1_Mus1 LINE L1 5154 5932 -635 1 819 4298 126 125 26 chrX 30704265 30705072 -135945224 + RMER17D LTR ERVK 1 887 -2 1 819 7462 66 7 12 chrX 30705072 30705711 -135944585 + L1_Mus1 LINE L1 5933 6567 0 1 819 252 0 0 0 chrX 30705737 30705765 -135944531 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 1 819 1131 156 166 22 chrX 30706218 30706447 -135943849 - Lx5 LINE L1 -1 7049 6788 1 819 4875 164 9 2 chrX 30706558 30707432 -135942864 + L1_Mur2 LINE L1 3947 4826 -1051 1 819 5030 98 35 13 chrX 30707428 30708204 -135942092 - L1_Mur2 LINE L1 -258 5619 4827 1 819 286 161 18 0 chrX 30708711 30708767 -135941529 - MERVL_2A-int LTR ERVL -3496 2265 2209 1 819 2154 209 77 2 chrX 30708804 30709246 -135941050 + MERVL_2A-int LTR ERVL 3130 3604 -2157 1 819 29916 100 30 8 chrX 30709246 30711746 -135938550 + L1Md_F2 LINE L1 951 3476 -2407 1 819 318 26 0 0 chrX 30711746 30711785 -135938511 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 1 819 29916 100 36 7 chrX 30711785 30712553 -135937743 + L1Md_F2 LINE L1 3477 4350 -1533 1 819 3283 28 15 0 chrX 30712553 30712943 -135937353 - MTA_Mm LTR MaLR 0 396 1 1 819 29916 101 36 6 chrX 30712943 30714891 -135935405 + L1Md_F2 LINE L1 4351 6320 -262 1 819 720 123 33 46 chrX 30714903 30715056 -135935240 + L1Md_F2 LINE L1 6430 6580 -4 1 819 26041 92 159 9 chrX 30715256 30720057 -135930239 + L1Md_T LINE L1 220 5586 -297 1 819 8245 39 1 0 chrX 30720057 30721050 -135929246 + L1Md_T LINE L1 5587 6580 -2 1 819 318 0 0 0 chrX 30721050 30721093 -135929203 + L1Md_T LINE L1 6537 6579 -3 1 819 204 67 0 0 chrX 30721096 30721126 -135929170 + (A)n Simple_repeat Simple_repeat 1 30 0 1 819 22131 122 19 21 chrX 30721126 30725693 -135924603 + L1_Mus1 LINE L1 2001 6654 0 1 819 7053 111 12 2 chrX 30725702 30727159 -135923137 + L1_Mus2 LINE L1 5092 6565 -1 1 819 944 181 113 7 chrX 30727177 30727461 -135922835 + L1_Mur3 LINE L1 3073 3386 -2494 1 819 5666 190 40 52 chrX 30727467 30728802 -135921494 + L1_Mur3 LINE L1 4418 5736 -144 1 819 754 346 70 17 chrX 30729981 30730463 -135919833 - Lx8 LINE L1 -236 7237 6730 1 819 1477 306 79 21 chrX 30730478 30731048 -135919248 - Lx8 LINE L1 -800 6673 6071 1 819 722 272 11 50 chrX 30731396 30731755 -135918541 + RMER19A LTR ERVK 1 259 -478 2 819 438 20 0 0 chrX 30731963 30732014 -135918282 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 819 377 277 0 61 chrX 30732367 30732532 -135917764 + GA-rich Low_complexity Low_complexity 4 158 0 2 819 866 291 77 35 chrX 30735005 30735343 -135914953 - MTE2a LTR MaLR 0 379 28 2 819 476 284 60 7 chrX 30735345 30735494 -135914802 - MTE2a-int LTR MaLR 0 1580 1424 2 819 782 186 29 23 chrX 30735495 30735666 -135914630 - L1_Mur3 LINE L1 -1120 4760 4589 2 819 29 0 0 0 chrX 30737933 30737962 -135912334 + AT_rich Low_complexity Low_complexity 1 29 0 2 819 14494 135 11 8 chrX 30737991 30741087 -135909209 - L1_Mus3 LINE L1 0 6638 3531 2 819 996 104 0 7 chrX 30741081 30741226 -135909070 - L1_Mus3 LINE L1 -3499 2384 2241 2 819 629 294 24 34 chrX 30741702 30741994 -135908302 + RLTR15 LTR ERVK 3 291 -68 2 819 1613 236 40 0 chrX 30742046 30742373 -135907923 + ORR1B1 LTR MaLR 14 353 -41 2 819 475 216 0 183 chrX 30742373 30742537 -135907759 + B1_Mus2 SINE Alu 1 134 -13 2 819 231 197 14 27 chrX 30742544 30742617 -135907679 + (CAGAGA)n Simple_repeat Simple_repeat 4 75 0 2 819 261 57 0 0 chrX 30742617 30742652 -135907644 + (TC)n Simple_repeat Simple_repeat 2 36 0 2 819 441 0 0 0 chrX 30742654 30742703 -135907593 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 819 414 94 0 0 chrX 30743272 30743336 -135906960 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 2 819 264 228 200 38 chrX 30743428 30743533 -135906763 + RLTR6_Mm LTR ERV1 1 122 -532 2 819 1929 133 254 29 chrX 30743535 30743984 -135906312 + RLTR6_Mm LTR ERV1 37 586 -68 2 819 481 252 71 7 chrX 30743982 30744122 -135906174 + ORR1D2 LTR MaLR 205 353 -17 2 819 35538 37 6 0 chrX 30744180 30749789 -135900507 + L1Md_T LINE L1 1 5589 -297 2 819 9589 5 0 0 chrX 30749789 30750785 -135899511 + L1Md_T LINE L1 5590 6585 0 2 819 231 114 0 0 chrX 30750791 30750835 -135899461 + (A)n Simple_repeat Simple_repeat 1 44 0 2 819 246 32 0 0 chrX 30751085 30751116 -135899180 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 2 819 311 49 0 24 chrX 30751323 30751365 -135898931 + RMER10B LTR ERVL 1 41 -357 2 819 320 212 83 66 chrX 30751590 30751711 -135898585 + RMER17C-int LTR ERVK 2972 3094 -144 2 819 1512 161 75 117 chrX 30751777 30752205 -135898091 - RMER17C LTR ERVK 0 410 1 2 819 1592 186 182 6 chrX 30752220 30752555 -135897741 + RMER10B LTR ERVL 5 398 0 2 819 1167 175 12 82 chrX 30752820 30753063 -135897233 - URR1A DNA MER1_type 0 226 1 2 819 29 0 0 0 chrX 30754046 30754075 -135896221 + AT_rich Low_complexity Low_complexity 1 29 0 2 819 856 189 13 20 chrX 30754310 30754461 -135895835 - B1_Mur4 SINE Alu 0 150 1 2 819 411 78 130 0 chrX 30754737 30754814 -135895482 + ORR1A2 LTR MaLR 1 87 -240 2 819 1854 107 250 0 chrX 30754816 30755144 -135895152 - ORR1A2-int LTR MaLR -535 1428 1019 2 819 289 342 51 0 chrX 30755149 30755266 -135895030 + ETnERV2-int LTR ERVK 7074 7196 -210 2 819 3043 188 35 30 chrX 30755539 30756117 -135894179 - ORR1A2-int LTR MaLR -936 1027 394 2 819 2954 66 7 122 chrX 30756117 30756375 -135893921 - MTB LTR MaLR 0 400 183 2 819 1200 75 0 0 chrX 30756375 30756521 -135893775 - B1_Mm SINE Alu 0 147 2 2 819 2954 66 7 122 chrX 30756521 30756713 -135893583 - MTB LTR MaLR -218 182 2 2 819 3043 174 18 20 chrX 30756713 30757101 -135893195 - ORR1A2-int LTR MaLR -1395 397 1 2 819 2320 125 25 0 chrX 30757101 30757420 -135892876 - ORR1A2 LTR MaLR 0 327 1 2 819 1683 131 11 0 chrX 30757420 30757695 -135892601 + ORR1A2-int LTR MaLR 1686 1963 0 2 819 2059 156 3 58 chrX 30757695 30758041 -135892255 + ORR1A2 LTR MaLR 1 327 0 2 819 290 385 41 57 chrX 30758259 30758867 -135891429 + L2a LINE L2 2791 3386 -40 2 819 2764 219 70 37 chrX 30759161 30759497 -135890799 - RMER6D LTR ERVK 0 720 366 2 819 321 68 0 0 chrX 30759497 30759541 -135890755 + (CCA)n Simple_repeat Simple_repeat 3 46 0 2 819 2764 219 70 37 chrX 30759541 30759598 -135890698 - RMER6D LTR ERVK -355 365 315 2 819 2123 145 69 6 chrX 30759598 30759944 -135890352 + RLTR9A LTR ERVK 1 368 0 2 819 2764 219 70 37 chrX 30759944 30760231 -135890065 - RMER6D LTR ERVK -406 314 16 2 819 275 116 0 0 chrX 30760257 30760300 -135889996 + L1_Mur2 LINE L1 151 193 -6519 2 819 319 91 0 0 chrX 30760317 30760361 -135889935 + RLTR1 LTR ERV1 581 624 0 2 819 4114 132 203 2 chrX 30760361 30761461 -135888835 + L1_Mur2 LINE L1 410 1746 -4131 2 819 9212 131 31 20 chrX 30761432 30762156 -135888140 + L1_Mur2 LINE L1 2140 2850 -3027 2 819 2242 176 45 2 chrX 30762156 30762583 -135887713 - BGLII_A LTR ERVK 0 445 1 2 819 9212 131 31 20 chrX 30762583 30763472 -135886824 + L1_Mur2 LINE L1 2851 3769 -2108 2 819 3774 210 50 17 chrX 30763850 30764321 -135885975 + Lx4A LINE L1 820 1414 -2500 2 819 2195 120 3 0 chrX 30764321 30764629 -135885667 + L1_Mus1 LINE L1 6259 6567 0 2 819 10661 183 167 161 chrX 30764629 30765492 -135884804 + Lx4A LINE L1 1415 2288 -3589 2 819 2155 267 66 54 chrX 30765492 30766126 -135884170 + RLTR26 LTR ERVK 1 642 0 2 819 10661 183 167 161 chrX 30766126 30766277 -135884019 + Lx4A LINE L1 2289 2442 -3435 2 819 3114 84 5 2 chrX 30766277 30766672 -135883624 + MTA_Mm LTR MaLR 1 396 0 2 819 10661 183 168 162 chrX 30766672 30768465 -135881831 + Lx4A LINE L1 2443 4251 -1626 2 819 1269 138 0 5 chrX 30768465 30768654 -135881642 + B2_Mm2 SINE B2 1 188 -7 2 819 10661 183 155 147 chrX 30768654 30769514 -135880782 + Lx4A LINE L1 4252 5868 -1190 2 819 2866 206 36 7 chrX 30769514 30770062 -135880234 + Lx4A LINE L1 6493 7056 -2 2 819 25 0 0 0 chrX 30770062 30770087 -135880209 + AT_rich Low_complexity Low_complexity 1 25 0 2 819 3932 214 50 15 chrX 30770714 30771560 -135878736 - RMER19B LTR ERVK -27 875 1 2 819 2855 121 55 38 chrX 30774876 30775350 -135874946 + RLTR45 LTR ERVK 1 482 0 2 819 3027 95 9 19 chrX 30775895 30776326 -135873970 - L1Md_F2 LINE L1 0 6582 6156 2 819 1067 110 0 20 chrX 30776571 30776719 -135873577 + B1_Mus2 SINE Alu 1 145 -2 2 819 279 0 0 0 chrX 30776730 30776761 -135873535 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 819 1084 240 140 48 chrX 30776847 30777110 -135873186 + ORR1B2 LTR MaLR 1 292 -75 2 819 2408 134 16 69 chrX 30777110 30777543 -135872753 - MT2B LTR ERVL 0 601 192 2 819 229 221 159 14 chrX 30777487 30777556 -135872740 - PB1 SINE Alu -28 99 21 2 819 1226 69 7 0 chrX 30777575 30777720 -135872576 - B1_Mus2 SINE Alu 0 147 2 2 819 301 291 8 106 chrX 30778190 30778313 -135871983 + RSINE1 SINE B4 55 165 0 2 819 447 298 32 53 chrX 30778342 30778530 -135871766 - RLTR23 LTR ERV1 0 430 247 2 819 283 355 38 31 chrX 30778818 30778978 -135871318 - Lx9 LINE L1 -218 7426 7266 2 819 1156 197 98 0 chrX 30779026 30779331 -135870965 - Lx9 LINE L1 -1 7643 7309 2 819 2475 153 56 12 chrX 30779333 30779762 -135870534 + RLTR11B LTR ERVK 3 450 -3 2 819 482 151 22 55 chrX 30779764 30779855 -135870441 - Lx9 LINE L1 -427 7217 7130 2 819 1274 146 28 28 chrX 30779854 30780065 -135870231 + Lx9 LINE L1 6810 7020 -624 2 819 695 180 78 0 chrX 30780104 30780232 -135870064 + B1_Mur2 SINE Alu 12 149 0 2 819 640 179 16 41 chrX 30780426 30780548 -135869748 - PB1D9 SINE Alu -1 119 1 2 819 293 68 23 0 chrX 30780629 30780673 -135869623 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 2 819 708 133 16 8 chrX 30780673 30780802 -135869494 - Lx LINE L1 -19 7039 6910 2 819 899 80 14 0 chrX 30780889 30781027 -135869269 - Lx LINE L1 -4 6650 6511 2 819 1269 300 63 48 chrX 30781639 30781732 -135868564 - Lx7 LINE L1 -1384 6312 6209 2 819 1309 131 0 37 chrX 30781732 30781946 -135868350 + Lx2 LINE L1 6792 6997 0 2 819 1269 300 63 48 chrX 30781946 30782004 -135868292 - Lx7 LINE L1 -1488 6208 6160 2 819 3318 96 22 39 chrX 30782004 30782494 -135867802 - RLTR45 LTR ERVK 0 482 1 2 819 1269 300 63 48 chrX 30782494 30782946 -135867350 - Lx7 LINE L1 -1537 6159 5699 2 819 885 81 0 0 chrX 30782948 30783071 -135867225 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 2 819 1125 73 44 0 chrX 30783071 30783208 -135867088 - B1_Mm SINE Alu -2 145 3 2 819 325 230 138 0 chrX 30783240 30783327 -135866969 - B1_Mur2 SINE Alu -2 147 49 2 819 991 297 46 123 chrX 30783332 30783988 -135866308 + RLTR18 LTR ERVK 3 607 -9 2 819 287 256 0 0 chrX 30783986 30784050 -135866246 - B1_Mus1 SINE Alu -85 64 1 2 819 803 324 55 24 chrX 30784051 30784309 -135865987 - Lx8 LINE L1 -485 6988 6721 2 819 1883 174 128 93 chrX 30784309 30784740 -135865556 + RLTR41 LTR ERV1 1 446 0 2 819 803 324 55 24 chrX 30784740 30784795 -135865501 - Lx8 LINE L1 -753 6720 6667 2 819 1828 181 31 116 chrX 30784795 30785277 -135865019 + RMER10A LTR ERVL 2 442 0 2 819 803 324 55 24 chrX 30785277 30785345 -135864951 - Lx8 LINE L1 -807 6666 6594 2 819 1589 165 98 98 chrX 30785345 30785774 -135864522 - RMER16 LTR ERVK 0 533 105 2 819 998 290 51 34 chrX 30785818 30786186 -135864110 - Lx8 LINE L1 -919 6554 6192 2 819 477 0 0 0 chrX 30786186 30786239 -135864057 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 819 998 290 51 34 chrX 30786239 30786280 -135864016 - Lx8 LINE L1 -1282 6191 6138 2 819 693 114 73 0 chrX 30786283 30786406 -135863890 - L1Md_F2 LINE L1 -1 6581 6450 2 819 4506 147 9 25 chrX 30786407 30787352 -135862944 + L1Md_A LINE L1 498 1423 -4460 2 819 264 246 0 0 chrX 30787385 30787442 -135862854 + Lx9 LINE L1 7201 7257 -387 2 819 13432 91 2 1 chrX 30787444 30788063 -135862233 - L1_Mm LINE L1 -116 5767 5150 2 819 225 0 0 0 chrX 30788063 30788088 -135862208 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 819 13432 91 2 1 chrX 30788088 30789294 -135861002 - L1_Mm LINE L1 -734 5149 3941 2 819 11128 94 5 0 chrX 30789292 30790946 -135859350 + L1Md_A LINE L1 1129 2790 -3093 2 819 42122 5 0 0 chrX 30790949 30797531 -135852765 - L1Md_A LINE L1 0 6582 1 2 819 8309 97 3 2 chrX 30797528 30798701 -135851595 + L1Md_A LINE L1 2773 3946 -1937 2 819 1114 260 19 58 chrX 30798703 30798825 -135851471 - ORR1D2-int LTR MaLR -749 621 472 2 819 2261 142 67 6 chrX 30798825 30799171 -135851125 - ORR1B2 LTR MaLR 0 367 1 2 819 1356 269 44 35 chrX 30799171 30799388 -135850908 - ORR1D2-int LTR MaLR -1038 471 232 2 819 699 204 411 7 chrX 30799388 30799555 -135850741 + RMER17C LTR ERVK 1 204 -206 2 819 843 28 27 34 chrX 30799555 30799703 -135850593 + (TTCTC)n Simple_repeat Simple_repeat 5 151 0 2 819 699 204 411 7 chrX 30799703 30799827 -135850469 + RMER17C LTR ERVK 205 409 -1 2 819 1356 266 35 35 chrX 30799827 30800064 -135850232 - ORR1D2-int LTR MaLR -1138 232 2 2 819 1359 263 56 20 chrX 30800064 30800421 -135849875 - ORR1D2 LTR MaLR 0 370 1 2 819 3188 277 83 45 chrX 30800539 30800868 -135849428 - Lx8 LINE L1 -2 7471 7123 2 819 729 53 0 0 chrX 30800868 30800962 -135849334 + (TTTC)n Simple_repeat Simple_repeat 2 95 0 2 819 3188 277 83 45 chrX 30800962 30800988 -135849308 - Lx8 LINE L1 -351 7122 7120 2 819 1195 83 0 0 chrX 30800988 30801133 -135849163 - B1_Mus2 SINE Alu -2 145 1 2 819 3188 277 83 45 chrX 30801133 30801685 -135848611 - Lx8 LINE L1 -354 7119 6511 2 819 594 28 0 0 chrX 30801685 30801757 -135848539 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 102 3188 277 83 45 chrX 30801757 30802100 -135848196 - Lx8 LINE L1 -963 6510 6173 2 820 433 80 0 26 chrX 30802111 30802188 -135848108 + (TA)n Simple_repeat Simple_repeat 2 76 0 2 820 580 266 198 36 chrX 30802207 30802652 -135847644 - L1M2 LINE L1 -1328 4815 4299 2 820 14028 99 65 11 chrX 30802652 30806078 -135844218 - MuRRS4-int LTR ERV1 -1276 3787 180 2 820 2668 140 7 17 chrX 30806168 30806581 -135843715 - RLTR9E LTR ERVK 0 409 1 2 820 524 93 0 26 chrX 30806581 30806658 -135843638 - ETnERV2-int LTR ERVK -1 7405 7331 2 820 22949 112 20 27 chrX 30806869 30807592 -135842704 - ETnERV2-int LTR ERVK -984 6422 5780 2 820 1234 102 78 11 chrX 30807592 30807611 -135842685 - B2_Mm1t SINE B2 -2 191 161 2 820 193 0 29 59 chrX 30807611 30807645 -135842651 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 2 820 1234 102 78 11 chrX 30807645 30807804 -135842492 - B2_Mm1t SINE B2 -33 160 1 2 820 22949 112 20 27 chrX 30807804 30809641 -135840655 - ETnERV2-int LTR ERVK -1627 5779 3934 2 820 516 32 0 0 chrX 30809641 30809703 -135840593 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 820 22949 112 20 27 chrX 30809703 30810534 -135839762 - ETnERV2-int LTR ERVK -3473 3933 3056 2 820 609 235 12 73 chrX 30810534 30810699 -135839597 - ETnERV2-int LTR ERVK -4798 2608 2454 2 820 650 165 26 9 chrX 30810716 30810832 -135839464 - RMER16-int LTR ERVK -4200 1206 1089 3 820 294 111 0 0 chrX 30810907 30810952 -135839344 - RMER16-int LTR ERVK -5218 188 144 3 820 331 100 0 20 chrX 30811402 30811453 -135838843 - ETnERV2-int LTR ERVK -5104 2140 2091 2 820 729 228 25 84 chrX 30811448 30811768 -135838528 - MMETn-int LTR ERVK -2942 372 10 3 820 2432 149 17 22 chrX 30811777 30812188 -135838108 - RLTR9E LTR ERVK 0 409 1 3 820 1674 182 39 34 chrX 30812315 30812697 -135837599 - LTRIS4 LTR ERV1 0 507 124 3 820 189 0 0 0 chrX 30813000 30813021 -135837275 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 3 820 3145 107 75 2 chrX 30813307 30813803 -135836493 + RLTR47_MM LTR ERV1 1 532 0 3 820 1349 226 56 5 chrX 30813803 30814133 -135836163 + ORR1B1-int LTR MaLR 325 728 -852 3 820 927 250 57 9 chrX 30814137 30814347 -135835949 - RLTR41 LTR ERV1 0 446 227 3 820 18410 166 27 21 chrX 30814806 30816512 -135833784 + L1_Mus3 LINE L1 361 2070 -3813 3 820 180 0 0 0 chrX 30816512 30816532 -135833764 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 820 18410 158 22 18 chrX 30816532 30816732 -135833564 + L1_Mus3 LINE L1 2071 2277 -3606 3 820 2762 78 6 3 chrX 30816732 30817077 -135833219 - ORR1A1 LTR MaLR 0 346 1 3 820 18410 158 22 18 chrX 30817077 30819399 -135830897 + L1_Mus3 LINE L1 2278 4613 -1270 3 820 6892 116 12 2 chrX 30819417 30820525 -135829771 + L1_Mus3 LINE L1 5515 6638 0 3 820 532 106 32 24 chrX 30821139 30821265 -135829031 + (TA)n Simple_repeat Simple_repeat 1 127 0 3 820 189 94 0 0 chrX 30822116 30822148 -135828148 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 3 820 4184 211 42 17 chrX 30825335 30826209 -135824087 + RMER19B LTR ERVK 1 896 -6 3 820 24 0 0 0 chrX 30826834 30826858 -135823438 + AT_rich Low_complexity Low_complexity 1 24 0 3 820 2832 195 30 11 chrX 30826858 30827391 -135822905 - Lx4A LINE L1 -1 7057 6515 3 820 4736 231 136 74 chrX 30827399 30828211 -135822085 - L1_Mur2 LINE L1 -371 5793 4927 3 820 952 156 0 0 chrX 30828211 30828346 -135821950 + B1_Mus2 SINE Alu 5 139 -8 3 820 306 0 0 0 chrX 30828356 30828390 -135821906 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 3 820 4736 225 144 78 chrX 30828390 30828467 -135821829 - L1_Mur2 LINE L1 -951 4926 4833 3 820 1379 112 0 5 chrX 30828467 30828655 -135821641 - B2_Mm2 SINE B2 -8 187 1 3 820 4736 225 144 78 chrX 30828655 30830320 -135819976 - L1_Mur2 LINE L1 -1045 4832 3025 3 820 29447 28 1 6 chrX 30830316 30836497 -135813799 - L1Md_T LINE L1 -1 6581 439 3 820 1832 228 6 2 chrX 30836494 30836987 -135813309 - MusHAL1 LINE L1 -871 1841 1347 3 820 247 237 33 17 chrX 30837018 30837078 -135813218 - MLT1G3 LTR MaLR -114 481 421 3 820 32796 77 4 4 chrX 30837445 30843732 -135806564 - L1Md_F2 LINE L1 0 6585 199 3 820 1330 129 15 23 chrX 30843734 30843996 -135806300 - L1_Mur2 LINE L1 -3319 2567 2308 3 820 2007 269 71 54 chrX 30844003 30844633 -135805663 - RLTR26 LTR ERVK 0 642 2 3 820 4235 189 66 8 chrX 30844636 30845477 -135804819 - L1VL4 LINE L1 -3582 2304 1411 3 820 2120 103 6 0 chrX 30845477 30845788 -135804508 - L1_Mus1 LINE L1 0 6567 6255 3 820 4235 217 54 4 chrX 30845788 30846301 -135803995 - L1VL4 LINE L1 -4476 1410 869 3 820 5248 173 9 124 chrX 30846747 30847667 -135802629 - L1_Mur2 LINE L1 -2109 3771 2871 3 820 1807 204 76 2 chrX 30847667 30848075 -135802221 + BGLII_A LTR ERVK 1 438 -7 3 820 5248 173 9 124 chrX 30848075 30848788 -135801508 - L1_Mur2 LINE L1 -2109 2870 2171 3 820 1293 116 24 12 chrX 30848783 30849037 -135801259 - L1_Mur2 LINE L1 -4137 1740 1484 3 820 1929 189 43 0 chrX 30849040 30849466 -135800830 - L1_Mur2 LINE L1 -6272 814 383 3 820 2869 231 35 56 chrX 30849492 30849700 -135800596 + RMER6D LTR ERVK 16 230 -490 3 820 2283 72 122 11 chrX 30849700 30850051 -135800245 + RLTR10 LTR ERVK 1 390 0 3 820 2869 231 35 56 chrX 30850051 30850137 -135800159 + RMER6D LTR ERVK 231 314 -406 3 820 1857 137 95 3 chrX 30850137 30850474 -135799822 - RLTR9A LTR ERVK 0 368 1 3 820 2869 231 35 56 chrX 30850474 30850532 -135799764 + RMER6D LTR ERVK 315 362 -358 3 820 198 0 0 0 chrX 30850532 30850554 -135799742 + (TGG)n Simple_repeat Simple_repeat 2 23 0 3 820 2869 231 35 56 chrX 30850554 30850919 -135799377 + RMER6D LTR ERVK 363 720 0 3 820 339 358 65 64 chrX 30851208 30851796 -135798500 - L2a LINE L2 -40 3386 2796 3 820 23 33 0 0 chrX 30851840 30851870 -135798426 + AT_rich Low_complexity Low_complexity 1 30 0 3 820 1771 135 101 36 chrX 30852572 30852909 -135797387 - ORR1B2 LTR MaLR -8 359 1 3 820 566 234 35 0 chrX 30853698 30853839 -135796457 + B1_Mur1 SINE Alu 2 147 -2 3 820 3336 141 69 18 chrX 30853929 30854048 -135796248 - Lx LINE L1 0 6654 6536 3 820 204 40 0 0 chrX 30854048 30854073 -135796223 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 3 820 3336 141 69 18 chrX 30854073 30854560 -135795736 - Lx LINE L1 -119 6535 6019 3 820 1780 179 3 9 chrX 30854560 30854887 -135795409 - ORR1A3 LTR MaLR -1 325 1 3 820 9861 151 62 14 chrX 30854887 30856760 -135793536 - ORR1A3-int LTR MaLR 0 1963 1 3 820 2025 114 30 31 chrX 30856762 30857118 -135793178 - MT2B2 LTR ERVL -2 582 189 3 820 285 350 68 27 chrX 30857158 30857305 -135792991 - RMER15 LTR ERVL -1 574 422 3 820 1996 156 13 0 chrX 30857690 30858004 -135792292 - ORR1A3 LTR MaLR -8 318 1 3 820 594 279 26 68 chrX 30858072 30858264 -135792032 - MTE2b LTR MaLR -15 364 181 3 820 1489 237 87 12 chrX 30858267 30858613 -135791683 + ORR1D1 LTR MaLR 3 374 0 3 820 694 271 28 11 chrX 30858613 30858790 -135791506 - MTE2b LTR MaLR -195 184 5 3 820 484 326 62 55 chrX 30858920 30859176 -135791120 + MER106B DNA MER1_type 1 258 -801 3 820 398 262 144 63 chrX 30859524 30859907 -135790389 + MER106B DNA MER1_type 445 858 -201 3 820 1072 102 0 0 chrX 30860357 30860504 -135789792 - B1_Mus1 SINE Alu -1 147 1 3 820 333 100 0 0 chrX 30860582 30860632 -135789664 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 820 686 337 68 0 chrX 30860699 30860904 -135789392 - B4A SINE B4 -73 219 1 3 820 822 186 202 0 chrX 30861009 30861192 -135789104 + URR1A DNA MER1_type 7 226 0 3 820 471 218 59 27 chrX 30861263 30861384 -135788912 + MTD LTR MaLR 282 405 -14 3 820 596 170 27 0 chrX 30861440 30861552 -135788744 + ORR1C2 LTR MaLR 1 115 -263 3 820 2127 93 64 72 chrX 30861556 30861915 -135788381 - RLTR10B2 LTR ERVK -9 356 1 3 820 1322 130 87 0 chrX 30861916 30862147 -135788149 + ORR1C2 LTR MaLR 95 345 -39 3 820 18821 83 3 6 chrX 30912147 30915804 -135734492 - L1Md_Gf LINE L1 -1944 3942 201 3 820 1331 133 15 15 chrX 30915808 30916068 -135734228 - L1_Mur1 LINE L1 -3319 2567 2308 3 820 2009 274 67 52 chrX 30916075 30916707 -135733589 - RLTR26 LTR ERVK 0 642 2 3 820 4208 190 63 8 chrX 30916710 30917554 -135732742 - L1_Mur1 LINE L1 -3582 2304 1411 3 820 2216 96 3 0 chrX 30917554 30917866 -135732430 - L1_Mus1 LINE L1 0 6567 6255 3 820 4208 219 54 4 chrX 30917866 30918382 -135731914 - L1_Mur1 LINE L1 -4476 1410 866 3 820 6487 128 9 222 chrX 30918825 30919746 -135730550 - L1_Mur2 LINE L1 -2107 3770 2862 3 820 1989 196 45 2 chrX 30919746 30920166 -135730130 + BGLII_A LTR ERVK 1 438 -7 3 820 6487 128 9 222 chrX 30920166 30920895 -135729401 - L1_Mur2 LINE L1 -2107 2861 2141 3 820 4032 136 198 9 chrX 30920900 30922017 -135728279 - L1_Mur2 LINE L1 -4164 1713 383 3 820 2955 219 42 53 chrX 30922043 30922331 -135727965 + RMER6D LTR ERVK 16 314 -406 3 820 1846 137 92 3 chrX 30922331 30922669 -135727627 - RLTR9A LTR ERVK 0 368 1 3 820 2955 219 42 53 chrX 30922669 30922727 -135727569 + RMER6D LTR ERVK 315 362 -358 3 820 279 0 0 0 chrX 30922727 30922758 -135727538 + (TGG)n Simple_repeat Simple_repeat 2 32 0 3 820 2955 219 42 53 chrX 30922758 30923123 -135727173 + RMER6D LTR ERVK 363 720 0 3 820 304 365 64 65 chrX 30923414 30924000 -135726296 - L2a LINE L2 -43 3383 2796 3 820 23 33 0 0 chrX 30924044 30924074 -135726222 + AT_rich Low_complexity Low_complexity 1 30 0 3 820 1760 135 101 36 chrX 30924778 30925115 -135725181 - ORR1B2 LTR MaLR -8 359 1 3 820 559 234 35 0 chrX 30925904 30926045 -135724251 + B1_Mur1 SINE Alu 2 147 -2 3 820 21 0 0 0 chrX 30926094 30926115 -135724181 + AT_rich Low_complexity Low_complexity 1 21 0 3 820 3398 138 69 15 chrX 30926137 30926256 -135724040 - Lx LINE L1 0 6654 6536 3 820 204 40 0 0 chrX 30926256 30926281 -135724015 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 3 820 3398 138 69 15 chrX 30926281 30926766 -135723530 - Lx LINE L1 -119 6535 6019 3 820 1710 191 3 12 chrX 30926766 30927094 -135723202 - ORR1A3 LTR MaLR -1 325 1 3 820 9726 152 63 19 chrX 30927094 30928974 -135721322 - ORR1A3-int LTR MaLR 0 1963 1 3 820 2108 117 29 45 chrX 30928976 30929371 -135720925 - MT2B2 LTR ERVL -2 582 155 3 820 321 333 68 27 chrX 30929371 30929519 -135720777 - RMER15 LTR ERVL 0 575 422 3 820 1942 162 13 0 chrX 30929904 30930218 -135720078 - ORR1A3 LTR MaLR -8 318 1 3 820 521 302 26 68 chrX 30930286 30930478 -135719818 - MTE2b LTR MaLR -15 364 181 3 820 1563 224 84 11 chrX 30930481 30930828 -135719468 + ORR1D1 LTR MaLR 3 374 0 3 820 647 288 28 11 chrX 30930828 30931005 -135719291 - MTE2b LTR MaLR -195 184 5 3 820 500 322 62 55 chrX 30931135 30931391 -135718905 + MER106B DNA MER1_type 1 258 -801 3 820 233 350 106 0 chrX 30931593 30931716 -135718580 + MER106B DNA MER1_type 266 401 -658 3 820 405 254 144 63 chrX 30931732 30932115 -135718181 + MER106B DNA MER1_type 445 858 -201 3 820 1046 109 0 0 chrX 30932570 30932717 -135717579 - B1_Mus1 SINE Alu -1 147 1 3 820 420 71 0 0 chrX 30932793 30932849 -135717447 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 102 686 337 68 0 chrX 30932916 30933121 -135717175 - B4A SINE B4 -73 219 1 3 821 790 192 198 0 chrX 30933222 30933409 -135716887 + URR1A DNA MER1_type 3 226 0 3 821 471 218 59 27 chrX 30933480 30933601 -135716695 + MTD LTR MaLR 282 405 -14 3 821 596 170 27 0 chrX 30933657 30933769 -135716527 + ORR1C2 LTR MaLR 1 115 -263 3 821 2191 78 64 72 chrX 30933773 30934132 -135716164 - RLTR10B2 LTR ERVK -9 356 1 3 821 1507 143 75 0 chrX 30934133 30934399 -135715897 + ORR1C2 LTR MaLR 95 380 -4 3 821 3055 117 12 37 chrX 30935320 30935807 -135714489 + MT2C_Mm LTR ERVL 1 475 0 3 821 573 249 47 61 chrX 30936237 30936665 -135713631 + L1_Mur3 LINE L1 1006 1429 -4451 3 821 529 161 131 0 chrX 30936678 30936808 -135713488 + Lx5 LINE L1 6904 7050 0 3 821 216 0 0 0 chrX 30936876 30936900 -135713396 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 3 821 5382 97 15 55 chrX 30936901 30937813 -135712483 + RLTR13A3 LTR ERVK 1 978 0 3 821 976 122 7 13 chrX 30937840 30937989 -135712307 - B1_Mus1 SINE Alu 0 148 1 3 821 2011 226 28 46 chrX 30937991 30938704 -135711592 + L1_Mur3 LINE L1 1459 2158 -3722 3 821 6737 102 12 3 chrX 30938710 30939736 -135710560 + L1_Mus3 LINE L1 5604 6638 0 3 821 469 162 0 18 chrX 30939758 30939871 -135710425 + GA-rich Low_complexity Low_complexity 2 112 0 3 821 2710 233 45 68 chrX 30939872 30940025 -135710271 + L1_Mur3 LINE L1 3047 3187 -2693 3 821 960 143 21 62 chrX 30940025 30940219 -135710077 + B2_Mm2 SINE B2 2 187 -8 3 821 2710 233 45 68 chrX 30940219 30940640 -135709656 + L1_Mur3 LINE L1 3188 3620 -2260 3 821 5986 138 24 17 chrX 30940640 30941656 -135708640 - RLTR13D5 LTR ERVK 0 1023 1 3 821 2710 233 45 68 chrX 30941656 30941936 -135708360 + L1_Mur3 LINE L1 3621 3889 -1991 3 821 902 180 0 0 chrX 30941936 30942086 -135708210 - B1_Mur4 SINE Alu 0 150 1 3 821 2710 233 45 68 chrX 30942086 30942280 -135708016 + L1_Mur3 LINE L1 3890 4073 -1807 3 821 718 174 0 15 chrX 30942284 30942418 -135707878 + MT2B LTR ERVL 1 132 -469 3 821 800 104 0 0 chrX 30942473 30942588 -135707708 + ORR1A2 LTR MaLR 213 327 0 3 821 2369 79 0 0 chrX 30942957 30943297 -135706999 - L1_Mm LINE L1 -1354 4529 4190 3 821 5508 112 18 5 chrX 30943315 30944156 -135706140 + L1_Mus3 LINE L1 5787 6638 0 3 821 549 269 148 10 chrX 30944174 30944485 -135705811 + L1MD2 LINE L1 5638 5991 -368 3 821 22 0 0 0 chrX 30944741 30944763 -135705533 + AT_rich Low_complexity Low_complexity 1 22 0 4 821 396 0 0 0 chrX 30946929 30946973 -135703323 + (TC)n Simple_repeat Simple_repeat 2 45 0 4 821 549 83 0 0 chrX 30946973 30947056 -135703240 + (TG)n Simple_repeat Simple_repeat 1 84 0 4 821 513 0 0 0 chrX 30947122 30947179 -135703117 + (TTTA)n Simple_repeat Simple_repeat 2 58 0 4 821 828 281 48 50 chrX 30947358 30947707 -135702589 - MTEa LTR MaLR 0 379 13 4 821 21 0 0 0 chrX 30947747 30947768 -135702528 + AT_rich Low_complexity Low_complexity 1 21 0 4 821 916 170 0 0 chrX 30947768 30947909 -135702387 + B1_Mur4 SINE Alu 1 141 -9 4 821 1010 98 13 0 chrX 30948485 30948638 -135701658 - L1_Mus1 LINE L1 -737 5146 4992 4 821 7118 80 4 32 chrX 30948635 30949448 -135700848 + L1_Mus1 LINE L1 5154 5932 -635 4 821 4290 132 126 24 chrX 30949448 30950253 -135700043 + RMER17D LTR ERVK 1 887 -2 4 821 7118 63 7 12 chrX 30950253 30950892 -135699404 + L1_Mus1 LINE L1 5933 6567 0 4 821 189 0 0 0 chrX 30950922 30950943 -135699353 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 821 1049 156 166 22 chrX 30951396 30951625 -135698671 - Lx5 LINE L1 -1 7049 6788 4 821 4668 161 8 2 chrX 30951736 30952611 -135697685 + L1_Mur2 LINE L1 3947 4826 -1051 4 821 4756 97 38 13 chrX 30952607 30953381 -135696915 - L1_Mur2 LINE L1 -258 5619 4827 4 821 269 161 18 0 chrX 30953888 30953944 -135696352 - MERVL_2A-int LTR ERVL -3496 2265 2209 4 821 2030 206 77 2 chrX 30953981 30954423 -135695873 + MERVL_2A-int LTR ERVL 3130 3604 -2157 4 821 28567 99 27 9 chrX 30954423 30956936 -135693360 + L1Md_F2 LINE L1 951 3476 -2407 4 821 282 29 0 0 chrX 30956936 30956971 -135693325 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 4 821 28567 100 32 9 chrX 30956971 30957739 -135692557 + L1Md_F2 LINE L1 3477 4350 -1533 4 821 3259 33 15 0 chrX 30957739 30958129 -135692167 - MTA_Mm LTR MaLR 0 396 1 4 821 28567 102 33 7 chrX 30958129 30960087 -135690209 + L1Md_F2 LINE L1 4351 6320 -262 4 821 684 130 33 46 chrX 30960099 30960252 -135690044 + L1Md_F2 LINE L1 6430 6580 -4 4 821 24504 88 150 6 chrX 30960452 30965279 -135685017 + L1Md_T LINE L1 220 5586 -297 4 821 8310 40 0 0 chrX 30965279 30966273 -135684023 + L1Md_T LINE L1 5587 6580 -2 4 821 317 0 0 0 chrX 30966273 30966317 -135683979 + L1Md_T LINE L1 6537 6580 -2 4 821 21504 127 15 7 chrX 30966338 30970874 -135679422 + L1_Mus1 LINE L1 2001 6654 0 4 821 6518 115 12 2 chrX 30970880 30972337 -135677959 + L1_Mus2 LINE L1 5092 6565 -1 4 821 794 195 113 7 chrX 30972355 30972639 -135677657 + L1_Mur3 LINE L1 3073 3386 -2494 4 821 5122 190 40 49 chrX 30972645 30973976 -135676320 + L1_Mur3 LINE L1 4418 5736 -144 4 821 478 311 21 5 chrX 30975444 30975638 -135674658 - Lx8 LINE L1 -547 6926 6730 4 821 1244 312 75 21 chrX 30975653 30976225 -135674071 - Lx8 LINE L1 -800 6673 6071 4 821 742 281 19 25 chrX 30976573 30976936 -135673360 + RMER19C LTR ERVK 1 273 -338 4 821 297 0 0 0 chrX 30977140 30977173 -135673123 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 821 182 211 0 34 chrX 30977536 30977595 -135672701 + GA-rich Low_complexity Low_complexity 1 57 0 4 821 257 238 37 24 chrX 30977608 30977690 -135672606 + GA-rich Low_complexity Low_complexity 1 83 0 4 821 911 285 77 35 chrX 30980164 30980502 -135669794 - MTE2a LTR MaLR 0 379 28 4 821 483 284 60 7 chrX 30980504 30980653 -135669643 - MTE2a-int LTR MaLR 0 1580 1424 4 821 703 186 29 23 chrX 30980654 30980825 -135669471 - L1_Mur3 LINE L1 -1120 4760 4589 4 821 29 0 0 0 chrX 30983092 30983121 -135667175 + AT_rich Low_complexity Low_complexity 1 29 0 4 821 13320 136 11 8 chrX 30983156 30986247 -135664049 - L1_Mus3 LINE L1 -6 6632 3531 4 821 924 104 0 7 chrX 30986241 30986386 -135663910 - L1_Mus3 LINE L1 -3499 2384 2241 4 821 649 303 25 21 chrX 30986862 30987145 -135663151 + RLTR15 LTR ERVK 3 286 -73 4 821 1612 239 40 0 chrX 30987206 30987533 -135662763 + ORR1B1 LTR MaLR 14 353 -41 4 821 464 186 0 183 chrX 30987533 30987697 -135662599 + B1_Mus2 SINE Alu 1 134 -13 4 821 231 197 14 27 chrX 30987704 30987777 -135662519 + (CAGAGA)n Simple_repeat Simple_repeat 4 75 0 4 821 531 31 0 0 chrX 30987777 30987842 -135662454 + (TC)n Simple_repeat Simple_repeat 2 66 0 4 821 276 30 0 0 chrX 30987844 30987877 -135662419 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 821 450 88 0 0 chrX 30988446 30988514 -135661782 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 4 821 1986 171 135 79 chrX 30988606 30989177 -135661119 + RLTR6_Mm LTR ERV1 1 603 -51 4 821 31267 32 26 0 chrX 30989178 30993407 -135656889 + RLTR6-int LTR ERV1 1 4414 -3364 4 821 6842 37 1 1 chrX 30993409 30994255 -135656041 + RLTR6-int LTR ERV1 6933 7778 0 4 821 251 248 200 38 chrX 30994255 30994360 -135655936 + RLTR6_Mm LTR ERV1 1 122 -532 4 821 1889 133 254 29 chrX 30994362 30994811 -135655485 + RLTR6_Mm LTR ERV1 37 586 -68 4 821 466 259 71 7 chrX 30994809 30994949 -135655347 + ORR1D2 LTR MaLR 205 353 -17 4 821 329 74 164 18 chrX 30995218 30995273 -135655023 + RMER10B LTR ERVL 1 63 -335 4 821 282 214 91 64 chrX 30995496 30995606 -135654690 + RMER17C-int LTR ERVK 2982 3094 -144 4 821 1353 164 75 117 chrX 30995672 30996100 -135654196 - RMER17C LTR ERVK 0 410 1 4 821 1364 184 186 6 chrX 30996115 30996449 -135653847 + RMER10B LTR ERVL 5 398 0 4 821 1007 179 12 119 chrX 30996714 30996967 -135653329 - URR1A DNA MER1_type 0 226 1 4 821 188 35 35 0 chrX 30997952 30997981 -135652315 + (TTA)n Simple_repeat Simple_repeat 2 31 0 4 821 788 199 20 0 chrX 30998223 30998369 -135651927 - B1_Mur4 SINE Alu -1 149 1 4 821 401 78 130 0 chrX 30998645 30998722 -135651574 + ORR1A2 LTR MaLR 1 87 -240 4 821 1845 113 250 0 chrX 30998724 30999052 -135651244 - ORR1A3-int LTR MaLR -535 1428 1019 4 821 1915 200 134 16 chrX 30999447 31000000 -135650296 - ORR1A3-int LTR MaLR -936 1027 410 4 821 2178 170 27 17 chrX 31000001 31000025 -135650271 - ORR1A2-int LTR MaLR -1376 416 398 1 821 2855 61 7 104 chrX 31000025 31000274 -135650022 - MTB LTR MaLR 0 400 183 2 821 1119 69 7 0 chrX 31000274 31000419 -135649877 - B1_Mm SINE Alu 0 147 2 3 821 2855 61 7 104 chrX 31000419 31000611 -135649685 - MTB LTR MaLR -218 182 2 2 821 2178 170 27 17 chrX 31000611 31000998 -135649298 - ORR1A2-int LTR MaLR -1395 397 1 1 821 2110 132 25 0 chrX 31000998 31001317 -135648979 - ORR1A2 LTR MaLR 0 327 1 1 821 1693 131 11 0 chrX 31001317 31001592 -135648704 + ORR1A2-int LTR MaLR 1686 1963 0 4 821 1909 156 3 58 chrX 31001592 31001938 -135648358 + ORR1A2 LTR MaLR 1 327 0 4 821 319 387 42 59 chrX 31002156 31002764 -135647532 + L2a LINE L2 2791 3386 -40 5 821 2794 218 70 37 chrX 31003058 31003394 -135646902 - RMER6D LTR ERVK 0 720 366 6 821 321 68 0 0 chrX 31003394 31003438 -135646858 + (CCA)n Simple_repeat Simple_repeat 3 46 0 7 821 2794 218 70 37 chrX 31003438 31003495 -135646801 - RMER6D LTR ERVK -355 365 315 6 821 1990 148 66 6 chrX 31003495 31003842 -135646454 + RLTR9A LTR ERVK 1 368 0 8 821 2794 218 70 37 chrX 31003842 31004129 -135646167 - RMER6D LTR ERVK -406 314 16 6 821 255 139 0 0 chrX 31004155 31004198 -135646098 + L1_Mur2 LINE L1 151 193 -6519 9 821 345 45 0 0 chrX 31004215 31004259 -135646037 + RLTR1 LTR ERV1 581 624 0 1 821 3639 145 202 1 chrX 31004259 31005359 -135644937 + L1_Mur2 LINE L1 410 1746 -4131 1 821 8573 128 30 18 chrX 31005338 31006053 -135644243 + L1_Mur2 LINE L1 2149 2850 -3027 1 821 1989 181 47 5 chrX 31006053 31006480 -135643816 - BGLII_A LTR ERVK 0 445 1 1 821 8573 128 30 18 chrX 31006480 31007366 -135642930 + L1_Mur2 LINE L1 2851 3769 -2108 1 821 1468 220 47 2 chrX 31007813 31008214 -135642082 + L1VL4 LINE L1 514 932 -5370 1 821 1942 130 7 0 chrX 31008214 31008521 -135641775 + L1_Mus1 LINE L1 6259 6567 0 1 821 9270 183 172 145 chrX 31008528 31009378 -135640918 + Lx4A LINE L1 1426 2283 -3594 1 821 1648 279 74 63 chrX 31009378 31009929 -135640367 + RLTR26 LTR ERVK 1 557 -85 1 821 9270 183 172 145 chrX 31009929 31010085 -135640211 + Lx4A LINE L1 2284 2442 -3435 1 821 2950 79 5 2 chrX 31010085 31010480 -135639816 + MTA_Mm LTR MaLR 1 396 0 1 821 9270 183 172 145 chrX 31010480 31012271 -135638025 + Lx4A LINE L1 2443 4457 -1420 1 821 1145 144 0 5 chrX 31012271 31012460 -135637836 + B2_Mm2 SINE B2 1 188 -7 1 821 9270 182 159 135 chrX 31012460 31013328 -135636968 + Lx4A LINE L1 4458 5875 -1183 1 821 2505 210 31 14 chrX 31013321 31013877 -135636419 + Lx4A LINE L1 6493 7057 -1 1 821 24 0 0 0 chrX 31013877 31013901 -135636395 + AT_rich Low_complexity Low_complexity 1 24 0 1 821 3991 215 45 15 chrX 31014530 31015380 -135634916 - RMER19B LTR ERVK -27 875 1 2 821 2663 122 50 38 chrX 31018478 31018954 -135631342 + RLTR45 LTR ERVK 1 482 0 2 821 2832 91 9 14 chrX 31019499 31019922 -135630374 - L1Md_F2 LINE L1 0 6582 6162 2 821 1017 103 0 20 chrX 31020175 31020323 -135629973 + B1_Mus2 SINE Alu 1 145 -2 2 821 243 0 0 0 chrX 31020334 31020361 -135629935 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 821 1089 217 139 54 chrX 31020447 31020710 -135629586 + ORR1B2 LTR MaLR 1 290 -77 2 821 2465 122 16 69 chrX 31020710 31021143 -135629153 - MT2B LTR ERVL 0 601 192 2 821 226 221 159 14 chrX 31021087 31021156 -135629140 - PB1 SINE Alu -28 99 21 2 821 1050 97 7 14 chrX 31021175 31021322 -135628974 - B1_Mus2 SINE Alu 0 147 2 2 821 302 291 8 106 chrX 31021792 31021915 -135628381 + RSINE1 SINE B4 55 165 0 2 821 415 307 27 54 chrX 31021947 31022133 -135628163 - RLTR23 LTR ERV1 -3 427 247 3 821 312 273 0 33 chrX 31022424 31022515 -135627781 - Lx9 LINE L1 -218 7426 7339 3 821 1008 197 98 0 chrX 31022632 31022937 -135627359 - Lx9 LINE L1 -1 7643 7309 3 821 2378 137 56 12 chrX 31022938 31023367 -135626929 + RLTR11B LTR ERVK 3 450 -3 3 821 427 163 22 55 chrX 31023369 31023460 -135626836 - Lx9 LINE L1 -427 7217 7130 3 821 1176 146 28 28 chrX 31023459 31023670 -135626626 + Lx9 LINE L1 6810 7020 -624 3 821 730 164 78 0 chrX 31023710 31023838 -135626458 + B1_Mur2 SINE Alu 12 149 0 3 821 566 195 16 41 chrX 31024034 31024157 -135626139 - PB1D9 SINE Alu 0 120 1 3 821 437 50 17 0 chrX 31024237 31024297 -135625999 + (TTTA)n Simple_repeat Simple_repeat 2 62 0 3 821 661 126 23 8 chrX 31024297 31024425 -135625871 - Lx LINE L1 -19 7039 6910 3 821 834 92 14 0 chrX 31024515 31024657 -135625639 - Lx LINE L1 0 6654 6511 3 821 1109 303 57 39 chrX 31025269 31025362 -135624934 - Lx7 LINE L1 -1384 6312 6209 3 821 1245 131 0 33 chrX 31025362 31025575 -135624721 + Lx2 LINE L1 6792 6997 0 3 821 1109 303 57 39 chrX 31025575 31025632 -135624664 - Lx7 LINE L1 -1488 6208 6160 3 821 3062 96 25 39 chrX 31025632 31026121 -135624175 - RLTR45 LTR ERVK 0 482 1 4 821 1109 303 57 39 chrX 31026121 31026580 -135623716 - Lx7 LINE L1 -1537 6159 5691 3 821 572 98 0 21 chrX 31026583 31026677 -135623619 + (TTTC)n Simple_repeat Simple_repeat 3 94 0 4 821 1067 79 43 0 chrX 31026677 31026816 -135623480 - B1_Mm SINE Alu 0 147 3 4 821 326 230 138 0 chrX 31026848 31026935 -135623361 - B1_Mur2 SINE Alu -2 147 49 4 821 978 308 40 116 chrX 31026940 31027594 -135622702 + RLTR18 LTR ERVK 3 606 -10 4 821 270 290 0 14 chrX 31027587 31027657 -135622639 - B1F2 SINE Alu -80 69 1 4 821 219 357 29 0 chrX 31027597 31027667 -135622629 - ID_B1 SINE B4 -83 141 70 4 821 546 326 16 16 chrX 31027671 31027914 -135622382 - Lx8 LINE L1 -507 6966 6724 4 821 1840 199 75 40 chrX 31027916 31028345 -135621951 + RLTR41 LTR ERV1 1 444 -2 4 821 1730 174 31 116 chrX 31028402 31028884 -135621412 + RMER10A LTR ERVL 2 442 0 4 821 1578 173 95 100 chrX 31028952 31029383 -135620913 - RMER16 LTR ERVK 0 533 105 5 821 844 297 23 40 chrX 31029455 31029851 -135620445 - Lx8 LINE L1 -947 6526 6138 4 821 624 114 73 0 chrX 31029854 31029977 -135620319 - L1Md_F2 LINE L1 -1 6581 6450 5 821 4214 145 9 25 chrX 31029978 31030923 -135619373 + L1Md_A LINE L1 498 1423 -4460 5 821 235 263 0 0 chrX 31030956 31031013 -135619283 + Lx9 LINE L1 7201 7257 -387 5 821 12144 96 1 9 chrX 31031015 31032858 -135617438 - L1_Mm LINE L1 -116 5767 3940 5 821 17525 99 2 14 chrX 31032864 31035699 -135614597 + L1_Mm LINE L1 1147 3946 -1937 5 821 612 260 20 57 chrX 31035701 31035823 -135614473 - ORR1D2-int LTR MaLR -749 621 476 5 821 2083 145 67 6 chrX 31035823 31036169 -135614127 - ORR1B2 LTR MaLR 0 367 1 5 821 634 257 73 41 chrX 31036169 31036389 -135613907 - ORR1D2-int LTR MaLR -1034 475 231 5 821 571 217 99 20 chrX 31036390 31036555 -135613741 + RMER17C LTR ERVK 3 185 -225 5 821 871 64 14 21 chrX 31036555 31036698 -135613598 + (TTCTC)n Simple_repeat Simple_repeat 5 146 0 5 821 571 217 99 20 chrX 31036698 31036734 -135613562 + RMER17C LTR ERVK 186 220 -190 5 821 806 262 9 27 chrX 31036838 31037058 -135613238 - ORR1D2-int LTR MaLR -1154 216 1 5 821 1179 266 56 28 chrX 31037058 31037418 -135612878 - ORR1D2 LTR MaLR 0 370 1 5 821 22 35 0 0 chrX 31037511 31037540 -135612756 + AT_rich Low_complexity Low_complexity 1 29 0 5 821 2720 272 88 48 chrX 31037540 31037866 -135612430 - Lx8 LINE L1 -5 7468 7123 6 821 1026 60 0 0 chrX 31037866 31038000 -135612296 + (TTTC)n Simple_repeat Simple_repeat 2 135 0 6 821 2720 272 88 48 chrX 31038000 31038024 -135612272 - Lx8 LINE L1 -351 7122 7119 6 821 1149 76 0 0 chrX 31038024 31038169 -135612127 - B1_Mus2 SINE Alu -2 145 1 6 821 2720 272 88 48 chrX 31038169 31038723 -135611573 - Lx8 LINE L1 -355 7118 6511 6 821 612 27 0 0 chrX 31038723 31038797 -135611499 + (CA)n Simple_repeat Simple_repeat 1 74 0 6 821 2720 272 88 48 chrX 31038797 31039136 -135611160 - Lx8 LINE L1 -963 6510 6175 6 821 265 187 13 13 chrX 31039136 31039212 -135611084 + (TATATG)n Simple_repeat Simple_repeat 4 79 0 6 821 506 257 183 37 chrX 31039255 31039610 -135610686 - L1M2 LINE L1 -1353 4790 4384 6 821 13011 102 64 11 chrX 31039674 31043103 -135607193 - MuRRS4-int LTR ERV1 -1274 3789 180 6 821 2452 143 7 17 chrX 31043193 31043606 -135606690 - RLTR9E LTR ERVK 0 409 1 6 821 389 132 0 14 chrX 31043608 31043677 -135606619 - ETnERV2-int LTR ERVK -3 7403 7336 6 821 19947 156 14 43 chrX 31043893 31044616 -135605680 - ETnERV2-int LTR ERVK -1185 6221 5780 6 821 1097 107 83 11 chrX 31044616 31044637 -135605659 - B2_Mm1t SINE B2 0 193 161 6 821 193 0 29 59 chrX 31044637 31044671 -135605625 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 6 821 1097 107 83 11 chrX 31044671 31044829 -135605467 - B2_Mm1t SINE B2 -33 160 1 6 821 19947 112 15 22 chrX 31044829 31047546 -135602750 - ETnERV2-int LTR ERVK -1627 5779 3055 6 821 486 271 0 61 chrX 31047546 31047711 -135602585 - ETnERV2-int LTR ERVK -4798 2608 2454 6 821 597 165 26 9 chrX 31047728 31047844 -135602452 - RMER16-int LTR ERVK -4200 1206 1089 7 821 267 133 0 0 chrX 31047919 31047964 -135602332 - RMER16-int LTR ERVK -5218 188 144 7 821 308 100 0 20 chrX 31048414 31048465 -135601831 - ETnERV2-int LTR ERVK -5104 2140 2091 6 821 648 205 18 79 chrX 31048520 31048780 -135601516 - MMETn-int LTR ERVK -2997 317 10 7 821 2285 149 17 22 chrX 31048789 31049200 -135601096 - RLTR9E LTR ERVK 0 409 1 7 821 1695 184 39 31 chrX 31049326 31049707 -135600589 - LTRIS4 LTR ERV1 0 507 124 7 821 192 40 0 0 chrX 31050010 31050035 -135600261 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 7 821 2910 107 75 2 chrX 31050319 31050815 -135599481 + RLTR47_MM LTR ERV1 1 532 0 7 821 1326 235 56 6 chrX 31050815 31051145 -135599151 + ORR1B1-int LTR MaLR 325 728 -852 7 821 935 243 58 10 chrX 31051149 31051357 -135598939 - RLTR41 LTR ERV1 0 446 229 7 821 16630 167 30 24 chrX 31051817 31053699 -135596597 + L1_Mus3 LINE L1 361 2282 -3601 7 821 2598 75 6 6 chrX 31053699 31054045 -135596251 - ORR1A1 LTR MaLR 0 346 1 7 821 16630 151 21 16 chrX 31054045 31056402 -135593894 + L1_Mus3 LINE L1 2283 4615 -1262 7 821 6412 112 12 2 chrX 31056409 31057517 -135592779 + L1_Mus3 LINE L1 5515 6638 0 7 821 281 151 35 11 chrX 31058131 31058218 -135592078 + (TA)n Simple_repeat Simple_repeat 1 89 0 7 821 222 105 0 0 chrX 31059071 31059109 -135591187 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 8 821 4184 214 42 13 chrX 31062265 31063135 -135587161 + RMER19B LTR ERVK 1 896 -6 8 821 24 0 0 0 chrX 31063762 31063786 -135586510 + AT_rich Low_complexity Low_complexity 1 24 0 8 102 2563 204 26 11 chrX 31063786 31064321 -135585975 - Lx4A LINE L1 -1 7057 6515 8 822 5407 237 115 58 chrX 31064329 31065140 -135585156 - L1_Mur2 LINE L1 -388 5792 4928 8 822 906 161 0 0 chrX 31065140 31065277 -135585019 + B1_Mus2 SINE Alu 5 141 -6 8 822 192 40 0 0 chrX 31065283 31065308 -135584988 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 8 822 5407 232 121 61 chrX 31065308 31065386 -135584910 - L1_Mur2 LINE L1 -950 4927 4833 8 822 1345 107 0 5 chrX 31065386 31065574 -135584722 - B2_Mm2 SINE B2 -8 187 1 8 822 5407 232 121 61 chrX 31065574 31067697 -135582599 - L1_Mur2 LINE L1 -1045 4832 2558 8 822 207 100 0 0 chrX 31067698 31067728 -135582568 + (T)n Simple_repeat Simple_repeat 1 30 0 8 822 32921 75 3 3 chrX 31068151 31074443 -135575853 - L1Md_F2 LINE L1 0 6585 199 8 822 1350 133 15 15 chrX 31074445 31074705 -135575591 - L1_Mur2 LINE L1 -3319 2567 2308 8 822 1992 280 65 49 chrX 31074712 31075343 -135574953 - RLTR26 LTR ERVK 0 642 2 9 822 4126 194 65 9 chrX 31075346 31076188 -135574108 - L1VL4 LINE L1 -3582 2304 1411 9 822 2172 103 3 0 chrX 31076188 31076500 -135573796 - L1_Mus1 LINE L1 0 6567 6255 9 822 4126 220 51 5 chrX 31076500 31077016 -135573280 - L1VL4 LINE L1 -4476 1410 869 9 822 6834 128 116 69 chrX 31077462 31078224 -135572072 - L1_Mur2 LINE L1 -2107 3770 2936 9 822 393 181 0 0 chrX 31078224 31078296 -135572000 + BGLII_A LTR ERVK 374 445 0 9 822 6834 128 116 69 chrX 31078296 31079020 -135571276 - L1_Mur2 LINE L1 -2107 2935 2141 9 822 1325 121 22 29 chrX 31078998 31079271 -135571025 - L1_Mur2 LINE L1 -4137 1740 1470 9 822 4141 158 137 0 chrX 31079284 31080140 -135570156 - L1_Mur2 LINE L1 -5743 1343 383 9 822 2964 223 38 53 chrX 31080166 31080454 -135569842 + RMER6D LTR ERVK 16 314 -406 9 822 1873 151 88 3 chrX 31080454 31080793 -135569503 - RLTR9A LTR ERVK 0 368 1 9 822 2964 223 38 53 chrX 31080793 31080851 -135569445 + RMER6D LTR ERVK 315 362 -358 9 822 360 0 0 0 chrX 31080851 31080891 -135569405 + (TGG)n Simple_repeat Simple_repeat 2 41 0 9 822 2964 223 38 53 chrX 31080891 31081259 -135569037 + RMER6D LTR ERVK 363 720 0 9 822 297 354 67 71 chrX 31081548 31082076 -135568220 - L2a LINE L2 -40 3386 2866 9 822 1781 132 101 36 chrX 31082275 31082612 -135567684 - ORR1B2 LTR MaLR -8 359 1 9 822 564 234 35 0 chrX 31083401 31083542 -135566754 + B1_Mur1 SINE Alu 2 147 -2 1 822 3595 129 41 35 chrX 31083632 31084266 -135566030 - Lx LINE L1 0 6654 6017 1 822 1727 194 0 9 chrX 31084266 31084594 -135565702 - ORR1A3 LTR MaLR -1 325 1 1 822 9697 153 62 19 chrX 31084594 31086476 -135563820 - ORR1A3-int LTR MaLR 0 1963 1 1 822 2035 138 24 45 chrX 31086478 31086875 -135563421 - MT2B2 LTR ERVL -2 582 155 1 822 321 333 68 27 chrX 31086875 31087023 -135563273 - RMER15 LTR ERVL 0 575 422 1 822 1910 169 13 0 chrX 31087408 31087722 -135562574 - ORR1A3 LTR MaLR -8 318 1 1 822 567 291 26 68 chrX 31087790 31087982 -135562314 - MTE2b LTR MaLR -15 364 181 1 822 1520 231 87 12 chrX 31087985 31088331 -135561965 + ORR1D1 LTR MaLR 3 374 0 1 822 718 266 28 11 chrX 31088331 31088508 -135561788 - MTE2b LTR MaLR -195 184 5 1 822 498 322 62 55 chrX 31088638 31088894 -135561402 + MER106B DNA MER1_type 1 258 -801 1 822 231 356 16 41 chrX 31089103 31089226 -135561070 + MER106B DNA MER1_type 266 385 -674 1 822 408 265 144 63 chrX 31089242 31089625 -135560671 + MER106B DNA MER1_type 445 858 -201 1 822 1052 109 0 0 chrX 31090079 31090226 -135560070 - B1_Mus1 SINE Alu -1 147 1 1 822 453 81 0 0 chrX 31090304 31090366 -135559930 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 822 686 337 68 0 chrX 31090433 31090638 -135559658 - B4A SINE B4 -73 219 1 1 822 790 192 198 0 chrX 31090739 31090926 -135559370 + URR1A DNA MER1_type 3 226 0 1 822 471 218 59 27 chrX 31090997 31091118 -135559178 + MTD LTR MaLR 282 405 -14 1 822 616 161 27 0 chrX 31091174 31091286 -135559010 + ORR1C2 LTR MaLR 1 115 -263 1 822 2152 84 64 72 chrX 31091290 31091649 -135558647 - RLTR10B2 LTR ERVK -9 356 1 1 822 1512 143 75 0 chrX 31091650 31091916 -135558380 + ORR1C2 LTR MaLR 95 380 -4 1 822 3003 122 12 37 chrX 31092837 31093324 -135556972 + MT2C_Mm LTR ERVL 1 475 0 1 822 397 243 59 79 chrX 31093742 31094046 -135556250 + L1_Mur3 LINE L1 1006 1303 -6425 1 822 1509 123 79 0 chrX 31094047 31094299 -135555997 + ORR1C2 LTR MaLR 109 380 -4 1 822 5452 121 11 14 chrX 31094348 31095187 -135555109 - RLTR13D5 LTR ERVK -187 836 1 1 822 1514 201 40 77 chrX 31095191 31095466 -135554830 + L1_Mur3 LINE L1 3621 3889 -1991 1 822 888 180 0 0 chrX 31095466 31095616 -135554680 - B1_Mur4 SINE Alu 0 150 1 1 822 1514 201 40 77 chrX 31095616 31095810 -135554486 + L1_Mur3 LINE L1 3890 4073 -1807 1 822 723 174 0 15 chrX 31095814 31095948 -135554348 + MT2B LTR ERVL 1 132 -469 1 822 765 122 0 0 chrX 31096003 31096118 -135554178 + ORR1A2 LTR MaLR 213 327 0 1 822 36456 46 9 0 chrX 31097190 31103453 -135546843 - L1Md_T LINE L1 -1 6581 263 1 822 378 0 0 0 chrX 31104160 31104202 -135546094 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 822 306 129 0 0 chrX 31104202 31104263 -135546033 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 822 748 287 65 51 chrX 31104524 31104869 -135545427 - MTEa LTR MaLR 0 379 13 1 822 21 0 0 0 chrX 31104909 31104930 -135545366 + AT_rich Low_complexity Low_complexity 1 21 0 1 822 902 170 0 0 chrX 31104930 31105071 -135545225 + B1_Mur4 SINE Alu 1 141 -9 1 822 210 268 0 0 chrX 31105234 31105290 -135545006 + A-rich Low_complexity Low_complexity 1 56 0 1 822 1069 90 0 0 chrX 31105645 31105800 -135544496 - L1Md_F2 LINE L1 -737 5146 4992 1 822 4702 84 5 26 chrX 31105797 31106603 -135543693 + L1Md_F2 LINE L1 5154 5931 -651 1 822 4215 130 8 56 chrX 31106604 31107406 -135542890 + RMER17A LTR ERVK 1 749 -2 1 822 4721 77 11 5 chrX 31107406 31108045 -135542251 + L1_Mus1 LINE L1 5925 6567 0 1 822 189 0 0 0 chrX 31108073 31108094 -135542202 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 822 718 200 109 26 chrX 31108549 31108775 -135541521 - Lx4B LINE L1 -4 7054 6788 1 822 180 0 0 0 chrX 31108776 31108796 -135541500 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 1 822 3586 194 73 1 chrX 31108883 31109703 -135540593 + L1_Mur3 LINE L1 3944 4822 -1058 1 822 4693 103 39 12 chrX 31109701 31110477 -135539819 - L1_Mur2 LINE L1 -254 5623 4827 1 822 269 161 18 0 chrX 31110984 31111040 -135539256 - MERVL_2A-int LTR ERVL -3496 2265 2209 1 822 1980 209 79 2 chrX 31111077 31111518 -135538778 + MERVL_2A-int LTR ERVL 3130 3604 -2157 1 822 27816 104 29 9 chrX 31111518 31114029 -135536267 + L1Md_F2 LINE L1 951 3476 -2407 1 822 213 39 0 0 chrX 31114029 31114055 -135536241 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 1 822 27816 106 34 9 chrX 31114055 31114820 -135535476 + L1Md_F2 LINE L1 3477 4350 -1533 1 822 3256 39 15 0 chrX 31114820 31115210 -135535086 - MTA_Mm LTR MaLR 0 396 1 1 822 27816 108 81 9 chrX 31115210 31117311 -135532985 + L1Md_F2 LINE L1 4351 6561 -21 1 822 532 103 19 0 chrX 31117311 31117418 -135532878 + (TA)n Simple_repeat Simple_repeat 1 109 0 1 822 25389 141 16 35 chrX 31117649 31124218 -135526078 + L1_Mus1 LINE L1 220 6654 0 1 822 6651 108 12 2 chrX 31124227 31125683 -135524613 + L1_Mus2 LINE L1 5092 6565 -1 1 822 266 180 69 10 chrX 31125693 31125794 -135524502 + L1_Mur3 LINE L1 3061 3167 -2710 1 822 4921 195 40 51 chrX 31125801 31127112 -135523184 + L1_Mur3 LINE L1 4441 5736 -144 1 822 548 321 65 23 chrX 31128421 31128775 -135521521 - Lx8 LINE L1 -375 7098 6730 1 822 1306 303 81 21 chrX 31128790 31129359 -135520937 - Lx8 LINE L1 -800 6673 6071 1 822 715 284 6 44 chrX 31129706 31130065 -135520231 + RMER19A LTR ERVK 1 259 -478 1 822 459 0 0 0 chrX 31130273 31130324 -135519972 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 822 349 290 0 61 chrX 31130677 31130842 -135519454 + GA-rich Low_complexity Low_complexity 4 158 0 1 822 852 294 77 35 chrX 31133314 31133652 -135516644 - MTE2a LTR MaLR 0 379 28 1 822 492 277 60 7 chrX 31133654 31133803 -135516493 - MTE2a-int LTR MaLR 0 1580 1424 1 822 674 202 23 18 chrX 31133804 31133975 -135516321 - L1_Mur3 LINE L1 -1120 4760 4589 1 822 29 0 0 0 chrX 31136115 31136144 -135514152 + AT_rich Low_complexity Low_complexity 1 29 0 1 822 549 0 0 0 chrX 31136187 31136248 -135514048 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 822 6297 123 9 6 chrX 31136248 31137882 -135512414 - L1_Mus3 LINE L1 -30 6608 4969 1 822 4231 211 42 13 chrX 31188678 31189548 -135460748 + RMER19B LTR ERVK 1 896 -6 1 822 2545 203 30 11 chrX 31190197 31190730 -135459566 - Lx4A LINE L1 -1 7057 6515 1 822 3799 157 66 6 chrX 31190730 31191525 -135458771 - Lx4A LINE L1 -1168 5882 4922 1 822 916 148 0 0 chrX 31191532 31191667 -135458629 + B1_Mus2 SINE Alu 5 139 -8 1 822 429 20 0 0 chrX 31191676 31191726 -135458570 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 1 822 1368 96 0 5 chrX 31191803 31191991 -135458305 - B2_Mm2 SINE B2 -8 187 1 1 822 2825 178 11 0 chrX 31191991 31192553 -135457743 - Lx4A LINE L1 -1626 4251 3684 1 822 586 214 43 0 chrX 31192937 31193054 -135457242 - ETnERV2-int LTR ERVK -214 7192 7071 1 822 2456 151 123 18 chrX 31193057 31193657 -135456639 - Lx4A LINE L1 -2190 3696 3034 1 102 33765 67 2 4 chrX 31193653 31199955 -135450341 - L1Md_A LINE L1 -1 6584 199 1 823 1350 129 15 15 chrX 31199957 31200217 -135450079 - Lx4A LINE L1 -3319 2567 2308 1 823 1868 286 68 51 chrX 31200224 31200854 -135449442 - RLTR26 LTR ERVK 0 642 2 1 823 4221 191 65 7 chrX 31200857 31201697 -135448599 - L1VL4 LINE L1 -3582 2304 1411 1 823 2045 110 10 0 chrX 31201697 31202007 -135448289 - L1_Mus1 LINE L1 0 6567 6255 1 823 4221 218 54 4 chrX 31202007 31202521 -135447775 - L1VL4 LINE L1 -4476 1410 869 1 823 5236 163 11 92 chrX 31202967 31203888 -135446408 - L1_Mur2 LINE L1 -2107 3779 2866 1 823 1952 196 48 2 chrX 31203888 31204307 -135445989 + BGLII_A LTR ERVK 1 438 -7 1 823 5236 163 11 92 chrX 31204307 31205028 -135445268 - L1_Mur2 LINE L1 -2107 2865 2149 1 823 1288 112 23 23 chrX 31205013 31205270 -135445026 - L1_Mur2 LINE L1 -4137 1740 1484 1 823 1883 196 43 0 chrX 31205273 31205699 -135444597 - L1_Mur2 LINE L1 -6272 814 383 1 823 3001 222 30 55 chrX 31205725 31205933 -135444363 + RMER6D LTR ERVK 16 230 -490 1 823 2305 69 122 11 chrX 31205933 31206284 -135444012 + RLTR10 LTR ERVK 1 390 0 1 823 3001 222 30 55 chrX 31206284 31206370 -135443926 + RMER6D LTR ERVK 231 314 -406 1 823 1897 133 92 3 chrX 31206370 31206708 -135443588 - RLTR9A LTR ERVK 0 368 1 1 823 3001 222 30 55 chrX 31206708 31206766 -135443530 + RMER6D LTR ERVK 315 362 -358 1 823 198 0 0 0 chrX 31206766 31206788 -135443508 + (TGG)n Simple_repeat Simple_repeat 2 23 0 1 823 3001 222 30 55 chrX 31206788 31207156 -135443140 + RMER6D LTR ERVK 363 720 0 1 823 320 358 65 64 chrX 31207445 31208033 -135442263 - L2a LINE L2 -40 3386 2796 1 823 23 33 0 0 chrX 31208077 31208107 -135442189 + AT_rich Low_complexity Low_complexity 1 30 0 1 823 1726 138 101 39 chrX 31208809 31209147 -135441149 - ORR1B2 LTR MaLR -8 359 1 1 823 582 227 35 0 chrX 31209936 31210077 -135440219 + B1_Mur1 SINE Alu 2 147 -2 1 823 3527 130 69 16 chrX 31210167 31210286 -135440010 - Lx LINE L1 0 6654 6536 1 823 204 40 0 0 chrX 31210286 31210311 -135439985 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 1 823 3527 130 69 16 chrX 31210311 31210802 -135439494 - Lx LINE L1 -119 6535 6014 1 823 1782 188 0 9 chrX 31210802 31211125 -135439171 - ORR1A3 LTR MaLR -6 320 1 1 823 9852 152 61 14 chrX 31211125 31213000 -135437296 - ORR1A3-int LTR MaLR 0 1963 1 1 823 2108 117 29 45 chrX 31213002 31213397 -135436899 - MT2B2 LTR ERVL -2 582 155 1 823 303 340 68 27 chrX 31213397 31213545 -135436751 - RMER15 LTR ERVL 0 575 422 1 823 1975 159 13 0 chrX 31213930 31214244 -135436052 - ORR1A3 LTR MaLR -8 318 1 1 823 560 291 26 68 chrX 31214312 31214504 -135435792 - MTE2b LTR MaLR -15 364 181 1 823 1520 231 87 12 chrX 31214507 31214853 -135435443 + ORR1D1 LTR MaLR 3 374 0 1 823 706 271 28 11 chrX 31214853 31215030 -135435266 - MTE2b LTR MaLR -195 184 5 1 823 487 326 62 55 chrX 31215160 31215416 -135434880 + MER106B DNA MER1_type 1 258 -801 1 823 231 356 16 41 chrX 31215625 31215748 -135434548 + MER106B DNA MER1_type 266 385 -674 1 823 425 259 144 63 chrX 31215764 31216147 -135434149 + MER106B DNA MER1_type 445 858 -201 1 823 1049 109 0 0 chrX 31216600 31216747 -135433549 - B1_Mus1 SINE Alu -1 147 1 1 823 402 74 0 0 chrX 31216824 31216878 -135433418 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 823 684 332 68 0 chrX 31216945 31217150 -135433146 - B4A SINE B4 -73 219 1 1 823 363 288 84 18 chrX 31217243 31217409 -135432887 - CYRA11_Mm Unknown Y-chromosome -225 392 216 1 823 801 184 114 6 chrX 31217263 31217438 -135432858 + URR1A DNA MER1_type 33 226 0 1 823 471 218 59 27 chrX 31217508 31217629 -135432667 + MTD LTR MaLR 282 405 -14 1 823 573 179 27 0 chrX 31217685 31217797 -135432499 + ORR1C2 LTR MaLR 1 115 -263 1 823 2028 99 64 72 chrX 31217801 31218160 -135432136 - RLTR10B2 LTR ERVK -9 356 1 1 823 1567 124 79 0 chrX 31218161 31218426 -135431870 + ORR1C2 LTR MaLR 95 380 -4 1 823 3011 122 12 37 chrX 31219347 31219834 -135430462 + MT2C_Mm LTR ERVL 1 475 0 1 823 643 257 75 70 chrX 31220109 31220226 -135430070 + L1_Mur3 LINE L1 894 1006 -6722 1 823 237 43 42 21 chrX 31220226 31220274 -135430022 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 1 823 643 264 66 56 chrX 31220274 31220686 -135429610 + L1_Mur3 LINE L1 1007 1429 -4451 1 823 537 143 135 0 chrX 31220703 31220829 -135429467 + Lx5 LINE L1 6908 7050 0 1 823 216 0 0 0 chrX 31220897 31220921 -135429375 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 823 5179 111 16 55 chrX 31220927 31221835 -135428461 + RLTR13A3 LTR ERVK 106 978 0 1 823 995 122 7 0 chrX 31221871 31222018 -135428278 - B1_Mus1 SINE Alu 0 148 1 1 823 1968 226 32 47 chrX 31222020 31222730 -135427566 + L1_Mur3 LINE L1 1459 2158 -3722 1 823 6771 101 11 3 chrX 31222736 31223763 -135426533 + L1_Mus3 LINE L1 5604 6638 0 2 823 460 139 0 29 chrX 31223781 31223885 -135426411 + GA-rich Low_complexity Low_complexity 4 104 0 2 823 2575 238 45 69 chrX 31223886 31224041 -135426255 + L1_Mur3 LINE L1 3047 3187 -2693 1 823 972 143 21 52 chrX 31224041 31224233 -135426063 + B2_Mm2 SINE B2 2 187 -8 2 823 2575 238 45 69 chrX 31224233 31224654 -135425642 + L1_Mur3 LINE L1 3188 3620 -2260 1 823 6265 128 19 15 chrX 31224654 31225673 -135424623 - RLTR13D5 LTR ERVK 0 1023 1 2 823 2575 238 45 69 chrX 31225673 31225953 -135424343 + L1_Mur3 LINE L1 3621 3889 -1991 1 823 893 180 0 0 chrX 31225953 31226103 -135424193 - B1_Mur4 SINE Alu 0 150 1 2 823 2575 238 45 69 chrX 31226103 31226297 -135423999 + L1_Mur3 LINE L1 3890 4073 -1807 1 823 693 189 0 15 chrX 31226301 31226435 -135423861 + MT2B LTR ERVL 1 132 -469 2 823 764 122 0 0 chrX 31226490 31226605 -135423691 + ORR1A2 LTR MaLR 213 327 0 2 823 2406 77 0 0 chrX 31226967 31227307 -135422989 - L1_Mm LINE L1 -1354 4529 4190 2 823 5385 120 20 5 chrX 31227325 31228164 -135422132 + L1_Mus3 LINE L1 5787 6638 0 2 823 540 266 148 10 chrX 31228186 31228497 -135421799 + L1MD2 LINE L1 5638 5991 -368 2 823 23 33 0 0 chrX 31228758 31228788 -135421508 + AT_rich Low_complexity Low_complexity 1 30 0 2 823 35622 36 4 1 chrX 31230268 31235527 -135414769 - L1Md_T LINE L1 -2 6580 1301 2 823 1451 174 10 0 chrX 31235524 31235822 -135414474 - L1Md_T LINE L1 -6053 563 263 2 823 306 0 0 0 chrX 31236529 31236563 -135413733 + (TC)n Simple_repeat Simple_repeat 2 35 0 2 823 534 75 0 0 chrX 31236563 31236642 -135413654 + (TG)n Simple_repeat Simple_repeat 1 80 0 2 823 791 279 66 52 chrX 31236902 31237247 -135413049 - MTEa LTR MaLR 0 379 13 2 823 21 0 0 0 chrX 31237287 31237308 -135412988 + AT_rich Low_complexity Low_complexity 1 21 0 2 823 957 156 0 0 chrX 31237308 31237449 -135412847 + B1_Mur4 SINE Alu 1 141 -9 2 823 1025 103 0 0 chrX 31238036 31238191 -135412105 - L1_Mus1 LINE L1 -737 5146 4992 2 823 4852 71 1 25 chrX 31238188 31238998 -135411298 + L1_Mus1 LINE L1 5154 5932 -635 2 823 4237 132 8 56 chrX 31238998 31239800 -135410496 + RMER17A LTR ERVK 1 749 -2 2 823 4759 74 11 5 chrX 31239800 31240439 -135409857 + L1_Mus1 LINE L1 5925 6567 0 2 823 189 0 0 0 chrX 31240467 31240488 -135409808 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2 823 603 205 160 28 chrX 31240944 31241161 -135409135 - Lx4B LINE L1 -4 7054 6788 2 823 180 0 0 0 chrX 31241162 31241182 -135409114 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 2 823 4627 161 8 3 chrX 31241272 31242147 -135408149 + L1_Mur2 LINE L1 3947 4825 -1052 2 823 4710 100 39 12 chrX 31242141 31242917 -135407379 - L1_Mur2 LINE L1 -254 5623 4827 2 823 254 179 18 0 chrX 31243425 31243481 -135406815 - MERVL_2A-int LTR ERVL -3496 2265 2209 2 823 1979 213 77 2 chrX 31243518 31243960 -135406336 + MERVL_2A-int LTR ERVL 3130 3604 -2157 2 823 26658 105 29 41 chrX 31243960 31246468 -135403828 + L1Md_F2 LINE L1 951 3476 -2407 2 823 270 0 0 0 chrX 31246468 31246498 -135403798 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 2 823 26658 106 34 47 chrX 31246498 31247262 -135403034 + L1Md_F2 LINE L1 3477 4350 -1533 2 823 3317 26 15 3 chrX 31247262 31247653 -135402643 - MTA_Mm LTR MaLR 0 396 1 2 823 26658 106 34 47 chrX 31247653 31247944 -135402352 + L1Md_F2 LINE L1 4351 4491 -1392 2 823 8009 56 0 0 chrX 31247944 31248940 -135401356 + L1Md_T LINE L1 5587 6582 0 2 823 26658 107 35 37 chrX 31248940 31250782 -135399514 + L1Md_F2 LINE L1 4492 6317 -265 2 823 855 111 34 27 chrX 31250782 31250930 -135399366 + L1Md_F2 LINE L1 6416 6564 -18 2 823 423 117 29 0 chrX 31250930 31251033 -135399263 + (TA)n Simple_repeat Simple_repeat 1 106 0 2 823 689 299 18 120 chrX 31251264 31251752 -135398544 + L1VL1 LINE L1 4 395 -6027 2 823 537 233 32 11 chrX 31251758 31251938 -135398358 + L1Md_T LINE L1 527 820 -5799 2 823 24057 135 16 39 chrX 31251942 31256905 -135393391 + L1Md_T LINE L1 747 5591 -295 2 823 7922 57 1 0 chrX 31256908 31257898 -135392398 + L1Md_T LINE L1 5595 6585 0 2 823 2457 151 124 19 chrX 31257898 31258494 -135391802 + Lx4A LINE L1 3038 3696 -2190 2 823 586 214 43 0 chrX 31258497 31258614 -135391682 + ETnERV2-int LTR ERVK 7071 7192 -214 2 823 2825 178 11 0 chrX 31258998 31259560 -135390736 + Lx4A LINE L1 3684 4251 -1626 2 823 1368 96 0 5 chrX 31259560 31259748 -135390548 + B2_Mm2 SINE B2 1 187 -8 2 823 501 17 0 0 chrX 31259825 31259883 -135390413 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 2 823 911 148 0 0 chrX 31259892 31260027 -135390269 - B1_Mus2 SINE Alu -8 139 5 2 823 3783 158 67 6 chrX 31260034 31260829 -135389467 + Lx4A LINE L1 4922 5882 -1168 2 823 2545 203 30 11 chrX 31260829 31261362 -135388934 + Lx4A LINE L1 6515 7057 -1 2 823 4188 213 42 13 chrX 31262011 31262881 -135387415 - RMER19B LTR ERVK -6 896 1 2 823 228 100 0 0 chrX 31266095 31266135 -135384161 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 2 823 180 159 28 42 chrX 31267006 31267078 -135383218 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 823 6296 117 12 1 chrX 31267597 31268697 -135381599 - L1_Mus3 LINE L1 -6 6632 5515 2 823 17095 155 22 17 chrX 31268715 31271035 -135379261 - L1_Mus3 LINE L1 -1270 4613 2278 2 823 2556 87 6 3 chrX 31271035 31271380 -135378916 + ORR1A1 LTR MaLR 1 346 0 2 823 17095 155 22 17 chrX 31271380 31271580 -135378716 - L1_Mus3 LINE L1 -3606 2277 2071 2 823 180 0 0 0 chrX 31271580 31271600 -135378696 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 823 17095 157 21 37 chrX 31271600 31273302 -135376994 - L1_Mus3 LINE L1 -3813 2070 410 2 823 935 243 58 10 chrX 31273766 31273974 -135376322 + RLTR41 LTR ERV1 229 446 0 2 823 1347 230 56 6 chrX 31273978 31274308 -135375988 - ORR1B1-int LTR MaLR -852 728 325 2 823 2888 107 75 2 chrX 31274308 31274804 -135375492 - RLTR47_MM LTR ERV1 0 532 1 2 823 189 0 0 0 chrX 31275091 31275112 -135375184 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 2 823 1728 180 39 29 chrX 31275412 31275795 -135374501 + LTRIS4 LTR ERV1 121 507 0 2 823 2287 149 17 22 chrX 31275922 31276333 -135373963 + RLTR9E LTR ERVK 1 409 0 2 823 647 205 18 79 chrX 31276342 31276602 -135373694 + MMETn-int LTR ERVK 10 317 -2997 2 823 308 100 0 20 chrX 31276657 31276708 -135373588 + ETnERV2-int LTR ERVK 2091 2140 -5104 2 823 272 111 0 0 chrX 31277158 31277203 -135373093 + RMER16-int LTR ERVK 144 188 -5218 2 823 597 165 26 9 chrX 31277278 31277394 -135372902 + RMER16-int LTR ERVK 1089 1206 -4200 2 823 408 208 0 73 chrX 31277445 31277554 -135372742 + ETnERV2-int LTR ERVK 2508 2608 -4798 2 823 22927 110 21 28 chrX 31277554 31278388 -135371908 + ETnERV2-int LTR ERVK 3055 3932 -3474 2 823 504 0 0 0 chrX 31278388 31278444 -135371852 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 823 22927 110 21 28 chrX 31278444 31280278 -135370018 + ETnERV2-int LTR ERVK 3933 5778 -1628 2 823 1186 107 83 11 chrX 31280278 31280436 -135369860 + B2_Mm1t SINE B2 1 160 -33 2 823 193 0 29 59 chrX 31280436 31280470 -135369826 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 2 823 1186 107 83 11 chrX 31280470 31280491 -135369805 + B2_Mm1t SINE B2 161 193 0 2 823 22927 110 21 28 chrX 31280491 31281213 -135369083 + ETnERV2-int LTR ERVK 5779 6421 -985 2 823 452 114 0 28 chrX 31281429 31281501 -135368795 + ETnERV2-int LTR ERVK 7336 7405 -1 2 823 2538 152 17 12 chrX 31281501 31281908 -135368388 + RLTR9E LTR ERVK 1 409 0 2 823 14032 100 64 12 chrX 31281989 31285426 -135364870 + MuRRS4-int LTR ERV1 170 3787 -1276 2 823 589 263 198 36 chrX 31285426 31285871 -135364425 + L1M2 LINE L1 4299 4815 -1328 2 823 295 145 0 28 chrX 31285890 31285961 -135364335 + (TA)n Simple_repeat Simple_repeat 1 69 0 2 823 3082 276 84 50 chrX 31285968 31286311 -135363985 + Lx8 LINE L1 6172 6509 -964 2 823 357 24 0 0 chrX 31286311 31286353 -135363943 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 823 3082 276 84 50 chrX 31286353 31286905 -135363391 + Lx8 LINE L1 6510 7118 -355 2 823 1204 83 0 0 chrX 31286905 31287050 -135363246 + B1_Mus2 SINE Alu 1 145 -2 2 823 3082 276 84 50 chrX 31287050 31287080 -135363216 + Lx8 LINE L1 7119 7121 -352 2 823 869 44 0 9 chrX 31287080 31287195 -135363101 + (GAAA)n Simple_repeat Simple_repeat 2 115 0 2 823 3082 276 84 50 chrX 31287195 31287524 -135362772 + Lx8 LINE L1 7122 7470 -3 2 823 1349 263 56 20 chrX 31287643 31288000 -135362296 + ORR1D2 LTR MaLR 1 370 0 2 823 771 266 9 27 chrX 31288000 31288220 -135362076 + ORR1D2-int LTR MaLR 1 216 -1154 2 823 599 215 98 20 chrX 31288324 31288360 -135361936 - RMER17C LTR ERVK -190 220 186 2 823 816 59 25 32 chrX 31288360 31288518 -135361778 + (GAGAA)n Simple_repeat Simple_repeat 5 161 0 2 823 599 215 98 20 chrX 31288518 31288685 -135361611 - RMER17C LTR ERVK -225 185 1 2 823 622 250 77 46 chrX 31288685 31288905 -135361391 + ORR1D2-int LTR MaLR 230 471 -1038 2 823 2183 151 67 6 chrX 31288905 31289251 -135361045 + ORR1B2 LTR MaLR 1 367 0 2 823 614 266 29 41 chrX 31289251 31289373 -135360923 + ORR1D2-int LTR MaLR 472 621 -749 2 823 18655 100 2 21 chrX 31289375 31292233 -135358063 - L1_Mm LINE L1 -1937 3946 1147 2 823 13257 94 1 10 chrX 31292239 31294084 -135356212 + L1_Mm LINE L1 3940 5767 -116 2 823 254 263 0 0 chrX 31294086 31294143 -135356153 - Lx9 LINE L1 -387 7257 7201 2 823 4492 142 13 25 chrX 31294176 31295118 -135355178 - L1Md_A LINE L1 -4460 1423 498 2 823 697 114 73 0 chrX 31295119 31295242 -135355054 + L1Md_F2 LINE L1 6450 6581 -1 2 823 982 301 25 41 chrX 31295245 31295688 -135354608 + Lx8 LINE L1 6138 6573 -900 2 823 1577 165 98 98 chrX 31295713 31296142 -135354154 + RMER16 LTR ERVK 105 533 0 2 823 699 342 35 27 chrX 31296142 31296210 -135354086 + Lx8 LINE L1 6594 6666 -807 2 823 1906 174 31 116 chrX 31296210 31296692 -135353604 - RMER10A LTR ERVL 0 442 2 2 823 699 342 35 27 chrX 31296692 31296747 -135353549 + Lx8 LINE L1 6667 6720 -753 2 823 1908 169 128 93 chrX 31296747 31297178 -135353118 - RLTR41 LTR ERV1 0 446 1 2 823 699 342 35 27 chrX 31297178 31297423 -135352873 + Lx8 LINE L1 6721 6966 -507 2 823 263 274 0 0 chrX 31297437 31297501 -135352795 + B1F2 SINE Alu 1 64 -85 2 823 828 294 45 35 chrX 31297517 31297806 -135352490 - RLTR18B LTR ERVK -28 484 193 2 823 514 320 34 79 chrX 31297889 31298154 -135352142 - RLTR18 LTR ERVK -361 255 3 2 823 325 230 138 0 chrX 31298159 31298246 -135352050 + B1_Mur2 SINE Alu 49 147 -2 2 823 1052 90 45 0 chrX 31298278 31298411 -135351885 + B1_Mm SINE Alu 3 141 -6 2 823 880 97 14 14 chrX 31298413 31298559 -135351737 + (GAAA)n Simple_repeat Simple_repeat 3 148 0 2 823 1265 307 56 40 chrX 31298561 31299013 -135351283 + Lx7 LINE L1 5699 6159 -1537 2 823 3322 96 22 39 chrX 31299013 31299503 -135350793 + RLTR45 LTR ERVK 1 482 0 2 823 1265 307 56 40 chrX 31299503 31299560 -135350736 + Lx7 LINE L1 6160 6208 -1488 2 823 1312 136 0 33 chrX 31299560 31299773 -135350523 - Lx2 LINE L1 0 6997 6792 2 823 1265 307 56 40 chrX 31299773 31299866 -135350430 + Lx7 LINE L1 6209 6312 -1384 2 823 876 99 14 0 chrX 31300478 31300620 -135349676 + Lx LINE L1 6511 6654 0 2 823 800 116 22 7 chrX 31300710 31300849 -135349447 + Lx4A LINE L1 6910 7050 -8 2 823 297 0 0 0 chrX 31300849 31300882 -135349414 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2 823 624 186 16 41 chrX 31300963 31301086 -135349210 + PB1D9 SINE Alu 1 120 0 2 823 742 156 78 0 chrX 31301282 31301410 -135348886 - B1_Mur2 SINE Alu 0 149 12 2 823 1269 156 28 28 chrX 31301442 31301660 -135348636 - Lx9 LINE L1 -617 7027 6810 2 823 482 151 22 55 chrX 31301659 31301750 -135348546 + Lx9 LINE L1 7130 7217 -427 2 823 2559 144 56 12 chrX 31301752 31302181 -135348115 - RLTR11B LTR ERVK -3 450 3 2 823 1144 197 98 0 chrX 31302182 31302487 -135347809 + Lx9 LINE L1 7309 7643 -1 2 823 337 323 38 31 chrX 31302535 31302695 -135347601 + Lx9 LINE L1 7266 7426 -218 2 823 429 219 31 20 chrX 31303077 31303175 -135347121 + RLTR23 LTR ERV1 332 430 0 2 823 302 291 8 106 chrX 31303204 31303327 -135346969 - RSINE1 SINE B4 0 165 55 2 823 1171 76 7 14 chrX 31303797 31303944 -135346352 + B1_Mus2 SINE Alu 2 147 0 2 823 229 221 159 14 chrX 31303963 31304032 -135346264 + PB1 SINE Alu 21 99 -28 2 823 2402 129 16 69 chrX 31303976 31304409 -135345887 + MT2B LTR ERVL 192 601 0 2 823 1080 230 140 48 chrX 31304409 31304672 -135345624 - ORR1B2 LTR MaLR -75 292 1 2 823 207 0 0 0 chrX 31304758 31304781 -135345515 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 823 1072 99 0 21 chrX 31304796 31304941 -135345355 - B1_Mus2 SINE Alu -5 142 1 2 823 3040 97 9 14 chrX 31305186 31305615 -135344681 + L1Md_F2 LINE L1 6156 6582 0 3 823 2871 118 55 38 chrX 31306159 31306633 -135343663 - RLTR45 LTR ERVK 0 482 1 3 823 3390 49 12 19 chrX 31307047 31307461 -135342835 + IAPLTR2a LTR ERVK 1 411 0 3 823 1011 116 30 86 chrX 31307462 31307660 -135342636 + IAPEz-int LTR ERVK 9 195 -6286 3 823 241 321 0 0 chrX 31307660 31307713 -135342583 + RLTR27 LTR ERVK 223 275 -34 3 823 10759 59 51 31 chrX 31307713 31309290 -135341006 + IAPEz-int LTR ERVK 168 1700 -4781 3 823 6254 65 13 13 chrX 31309285 31310112 -135340184 + IAPEz-int LTR ERVK 5653 6479 -2 3 823 3410 47 12 19 chrX 31310114 31310528 -135339768 + IAPLTR2a LTR ERVK 1 411 0 3 823 4020 211 45 15 chrX 31313440 31314290 -135336006 + RMER19B LTR ERVK 1 875 -27 3 823 24 0 0 0 chrX 31314919 31314943 -135335353 + AT_rich Low_complexity Low_complexity 1 24 0 3 823 2708 212 32 14 chrX 31314943 31315498 -135334798 - Lx4A LINE L1 -1 7057 6493 3 823 10877 188 159 132 chrX 31315491 31316358 -135333938 - Lx4A LINE L1 -1183 5875 4265 3 823 1256 138 0 5 chrX 31316358 31316547 -135333749 - B2_Mm2 SINE B2 -7 188 1 3 823 10877 190 171 142 chrX 31316547 31318334 -135331962 - Lx4A LINE L1 -1613 4264 2444 3 823 3116 81 5 2 chrX 31318334 31318729 -135331567 - MTA_Mm LTR MaLR 0 396 1 3 823 10877 190 171 142 chrX 31318729 31318881 -135331415 - Lx4A LINE L1 -3434 2443 2291 3 823 1664 277 74 69 chrX 31318881 31319435 -135330861 - RLTR26 LTR ERVK -85 557 1 3 823 10877 190 171 142 chrX 31319435 31320296 -135330000 - Lx4A LINE L1 -3434 2290 1417 3 823 2145 127 3 0 chrX 31320296 31320604 -135329692 - L1_Mus1 LINE L1 0 6567 6259 3 823 10877 211 87 57 chrX 31320604 31321075 -135329221 - Lx4A LINE L1 -4461 1416 820 3 823 9390 127 30 16 chrX 31321453 31322337 -135327959 - L1_Mur2 LINE L1 -2107 3770 2878 3 823 2162 175 52 9 chrX 31322337 31322764 -135327532 + BGLII_A LTR ERVK 1 445 0 3 823 9390 127 30 16 chrX 31322764 31323487 -135326809 - L1_Mur2 LINE L1 -3000 2877 2142 3 823 4009 139 203 2 chrX 31323458 31324558 -135325738 - L1_Mur2 LINE L1 -4131 1746 410 3 823 347 45 0 0 chrX 31324558 31324602 -135325694 - RLTR1 LTR ERV1 0 624 581 3 823 270 139 0 0 chrX 31324619 31324662 -135325634 - L1_Mur2 LINE L1 -6519 193 151 3 823 2762 218 70 37 chrX 31324688 31324975 -135325321 + RMER6D LTR ERVK 16 314 -406 3 823 2120 145 69 6 chrX 31324975 31325321 -135324975 - RLTR9A LTR ERVK 0 368 1 3 823 2762 218 70 37 chrX 31325321 31325378 -135324918 + RMER6D LTR ERVK 315 365 -355 3 823 321 68 0 0 chrX 31325378 31325422 -135324874 + (TGG)n Simple_repeat Simple_repeat 3 46 0 3 823 2762 218 70 37 chrX 31325422 31325758 -135324538 + RMER6D LTR ERVK 366 720 0 3 102 320 382 46 62 chrX 31326052 31326660 -135323636 - L2a LINE L2 -40 3386 2791 3 824 2060 156 3 58 chrX 31326878 31327224 -135323072 - ORR1A2 LTR MaLR 0 327 1 3 824 1683 131 11 0 chrX 31327224 31327499 -135322797 - ORR1A2-int LTR MaLR 0 1963 1686 3 824 2262 132 25 0 chrX 31327499 31327818 -135322478 + ORR1A2 LTR MaLR 1 327 0 3 824 4100 179 90 27 chrX 31327818 31328205 -135322091 + ORR1A2-int LTR MaLR 1 384 -1579 3 824 3046 66 7 96 chrX 31328205 31328397 -135321899 + MTB LTR MaLR 2 182 -218 3 824 1187 69 7 0 chrX 31328397 31328542 -135321754 + B1_Mm SINE Alu 2 147 0 3 824 3046 66 7 96 chrX 31328542 31328787 -135321509 + MTB LTR MaLR 183 400 0 3 824 4100 179 90 27 chrX 31328787 31329365 -135320931 + ORR1A2-int LTR MaLR 385 1027 -936 3 824 1867 107 250 0 chrX 31329760 31330088 -135320208 + ORR1A2-int LTR MaLR 1019 1428 -535 3 824 411 78 130 0 chrX 31330090 31330167 -135320129 - ORR1A2 LTR MaLR -240 87 1 3 824 838 196 13 20 chrX 31330443 31330594 -135319702 + B1_Mur4 SINE Alu 1 150 0 3 824 188 35 35 0 chrX 31330831 31330860 -135319436 + (TAA)n Simple_repeat Simple_repeat 2 31 0 3 824 1103 184 12 112 chrX 31331844 31332095 -135318201 + URR1A DNA MER1_type 1 226 0 3 824 1599 186 182 6 chrX 31332360 31332695 -135317601 - RMER10B LTR ERVL 0 398 5 3 824 1527 159 75 117 chrX 31332710 31333138 -135317158 + RMER17C LTR ERVK 1 410 0 3 824 320 212 83 66 chrX 31333204 31333325 -135316971 - RMER17C-int LTR ERVK -144 3094 2972 3 824 311 49 0 24 chrX 31333550 31333592 -135316704 - RMER10B LTR ERVL -357 41 1 3 824 481 252 71 7 chrX 31333861 31334001 -135316295 - ORR1D2 LTR MaLR -17 353 205 3 824 1909 135 254 29 chrX 31333999 31334448 -135315848 - RLTR6_Mm LTR ERV1 -68 586 37 3 824 227 257 200 38 chrX 31334450 31334555 -135315741 - RLTR6_Mm LTR ERV1 -532 122 1 3 824 7353 37 1 0 chrX 31334555 31335400 -135314896 - RLTR6-int LTR ERV1 0 7778 6933 3 824 33324 31 26 0 chrX 31335402 31339631 -135310665 - RLTR6-int LTR ERV1 -3364 4414 1 3 824 1943 177 136 82 chrX 31339632 31340204 -135310092 - RLTR6_Mm LTR ERV1 -51 603 1 3 824 357 117 0 0 chrX 31340296 31340356 -135309940 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 3 824 240 35 0 0 chrX 31340925 31340954 -135309342 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 824 441 36 0 0 chrX 31340956 31341011 -135309285 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 824 231 197 14 27 chrX 31341011 31341084 -135309212 + (TCTCTG)n Simple_repeat Simple_repeat 4 75 0 3 824 474 186 0 183 chrX 31341091 31341255 -135309041 - B1_Mus2 SINE Alu -13 134 1 3 824 1635 232 40 0 chrX 31341255 31341582 -135308714 - ORR1B1 LTR MaLR -41 353 14 3 824 588 311 25 21 chrX 31341643 31341926 -135308370 - RLTR15 LTR ERVK -73 286 3 3 824 996 104 0 7 chrX 31342401 31342546 -135307750 + L1_Mus3 LINE L1 2241 2384 -3499 3 824 14510 135 11 8 chrX 31342540 31345639 -135304657 + L1_Mus3 LINE L1 3531 6638 0 3 824 29 0 0 0 chrX 31345668 31345697 -135304599 + AT_rich Low_complexity Low_complexity 1 29 0 3 824 827 176 29 23 chrX 31347961 31348135 -135302161 + L1_Mur3 LINE L1 4586 4760 -1120 3 824 459 291 60 7 chrX 31348136 31348285 -135302011 + MTE2a-int LTR MaLR 1424 1580 0 3 824 878 288 77 35 chrX 31348287 31348625 -135301671 + MTE2a LTR MaLR 28 379 0 3 824 257 238 37 24 chrX 31351099 31351181 -135299115 + CT-rich Low_complexity Low_complexity 1 83 0 3 824 182 211 0 34 chrX 31351194 31351253 -135299043 + CT-rich Low_complexity Low_complexity 1 57 0 3 824 405 0 0 0 chrX 31351616 31351661 -135298635 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 824 707 277 13 51 chrX 31351865 31352228 -135298068 - RMER19C LTR ERVK -338 273 1 3 824 1453 306 83 21 chrX 31352576 31353144 -135297152 + Lx8 LINE L1 6071 6673 -800 3 824 718 342 79 27 chrX 31353159 31353642 -135296654 + Lx8 LINE L1 6730 7237 -236 3 824 5648 191 41 47 chrX 31354821 31356148 -135294148 - L1_Mur3 LINE L1 -144 5736 4418 3 824 922 184 113 7 chrX 31356154 31356438 -135293858 - L1_Mur3 LINE L1 -2494 3386 3073 3 824 6992 117 12 2 chrX 31356456 31357913 -135292383 - L1_Mus2 LINE L1 -1 6565 5092 3 824 23376 127 18 8 chrX 31357920 31362445 -135287851 - L1_Mus1 LINE L1 0 6654 2001 3 824 340 0 0 0 chrX 31362470 31362514 -135287782 - L1Md_T LINE L1 -2 6580 6537 3 824 27850 101 41 20 chrX 31362514 31368338 -135281958 - L1Md_T LINE L1 -2 6580 243 3 824 748 130 33 46 chrX 31368538 31368691 -135281605 - L1Md_F2 LINE L1 -4 6580 6430 3 824 30849 102 34 7 chrX 31368703 31370662 -135279634 - L1Md_F2 LINE L1 -262 6320 4352 3 824 3495 31 15 0 chrX 31370662 31371052 -135279244 + MTA_Mm LTR MaLR 1 396 0 3 824 30849 101 33 9 chrX 31371052 31371820 -135278476 - L1Md_F2 LINE L1 -1532 4351 3489 3 824 282 29 0 0 chrX 31371820 31371855 -135278441 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 3 824 30849 99 27 9 chrX 31371855 31374368 -135275928 - L1Md_F2 LINE L1 -2395 3488 951 3 824 2222 204 77 2 chrX 31374368 31374810 -135275486 - MERVL_2A-int LTR ERVL -2157 3604 3130 3 824 292 161 18 0 chrX 31374847 31374903 -135275393 + MERVL_2A-int LTR ERVL 2209 2265 -3496 3 824 5143 97 38 13 chrX 31375410 31376184 -135274112 + L1_Mur2 LINE L1 4827 5619 -258 3 824 5064 161 8 2 chrX 31376180 31377055 -135273241 - L1_Mur2 LINE L1 -1051 4826 3947 3 824 829 184 112 30 chrX 31377166 31377395 -135272901 + Lx4B LINE L1 6788 7057 -1 3 824 189 0 0 0 chrX 31377848 31377869 -135272427 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 3 824 5159 68 11 6 chrX 31377897 31378537 -135271759 - L1_Mus1 LINE L1 0 6567 5925 3 824 4244 135 8 56 chrX 31378537 31379339 -135270957 - RMER17A LTR ERVK -2 749 1 3 824 5172 73 5 26 chrX 31379339 31380146 -135270150 - L1_Mus1 LINE L1 -635 5932 5154 3 824 1146 90 0 0 chrX 31380143 31380298 -135269998 + L1_Mus1 LINE L1 4992 5146 -737 3 824 1002 163 0 0 chrX 31380874 31381015 -135269281 - B1_Mur4 SINE Alu -9 141 1 3 824 21 0 0 0 chrX 31381015 31381036 -135269260 + AT_rich Low_complexity Low_complexity 1 21 0 3 824 816 283 48 50 chrX 31381076 31381425 -135268871 + MTEa LTR MaLR 13 379 0 3 824 411 100 0 0 chrX 31381685 31381755 -135268541 + (CA)n Simple_repeat Simple_repeat 1 70 0 3 824 378 0 0 0 chrX 31381755 31381796 -135268500 + (GA)n Simple_repeat Simple_repeat 2 43 0 3 824 9483 80 23 2 chrX 31382495 31384652 -135265644 + L1Md_F LINE L1 254 2456 -3427 3 824 8274 25 1 0 chrX 31384649 31385812 -135264484 + L1Md_T LINE L1 4937 6100 -482 3 824 1588 120 75 0 chrX 31386377 31386643 -135263653 - ORR1C2 LTR MaLR -4 380 95 3 824 2092 99 64 72 chrX 31386644 31387003 -135263293 + RLTR10B2 LTR ERVK 1 356 -9 3 824 589 170 27 0 chrX 31387007 31387119 -135263177 - ORR1C2 LTR MaLR -263 115 1 3 824 468 218 59 27 chrX 31387175 31387296 -135263000 - MTD LTR MaLR -14 405 282 3 824 647 198 279 0 chrX 31387367 31387539 -135262757 - URR1A DNA MER1_type 0 226 7 3 824 669 337 68 0 chrX 31387644 31387849 -135262447 + B4A SINE B4 1 219 -73 3 824 315 104 0 0 chrX 31387916 31387964 -135262332 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 824 1139 102 0 0 chrX 31388043 31388190 -135262106 + B1_Mus1 SINE Alu 1 147 -1 3 824 398 262 144 63 chrX 31388639 31389022 -135261274 - MER106B DNA MER1_type -201 858 445 3 824 493 261 59 29 chrX 31389370 31389540 -135260756 - MER106B DNA MER1_type -801 258 84 3 824 694 271 28 11 chrX 31389723 31389900 -135260396 + MTE2b LTR MaLR 5 184 -195 3 824 1478 240 87 12 chrX 31389900 31390246 -135260050 - ORR1D1 LTR MaLR 0 374 3 3 824 594 279 26 68 chrX 31390249 31390441 -135259855 + MTE2b LTR MaLR 181 364 -15 3 824 1977 159 13 0 chrX 31390509 31390823 -135259473 + ORR1A3 LTR MaLR 1 318 -8 3 824 285 350 68 27 chrX 31391208 31391355 -135258941 + RMER15 LTR ERVL 422 574 -1 3 824 2064 108 30 31 chrX 31391395 31391751 -135258545 + MT2B2 LTR ERVL 189 582 -2 3 824 9821 152 62 14 chrX 31391753 31393626 -135256670 + ORR1A3-int LTR MaLR 1 1963 0 3 824 1795 176 3 9 chrX 31393626 31393953 -135256343 + ORR1A3 LTR MaLR 1 325 -1 3 824 3363 139 69 16 chrX 31393953 31394439 -135255857 + Lx LINE L1 6017 6518 -136 3 824 204 40 0 0 chrX 31394439 31394464 -135255832 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 3 824 3363 139 69 16 chrX 31394464 31394583 -135255713 + Lx LINE L1 6519 6653 -1 3 824 566 234 35 0 chrX 31394673 31394814 -135255482 - B1_Mur1 SINE Alu -2 147 2 3 824 1772 135 101 36 chrX 31395603 31395940 -135254356 + ORR1B2 LTR MaLR 1 359 -8 3 824 338 358 65 64 chrX 31396716 31397304 -135252992 + L2a LINE L2 2796 3386 -40 3 824 1751 223 45 29 chrX 31397593 31398038 -135252258 - RMER6C LTR ERVK 0 720 310 3 824 1872 137 92 3 chrX 31398038 31398376 -135251920 + RLTR9A LTR ERVK 1 368 0 3 824 1751 225 37 118 chrX 31398376 31398462 -135251834 - RMER6C LTR ERVK -381 309 227 3 824 2283 72 122 11 chrX 31398462 31398813 -135251483 - RLTR10 LTR ERVK 0 390 1 3 824 1751 225 37 118 chrX 31398813 31399021 -135251275 - RMER6C LTR ERVK -464 226 16 3 824 1930 189 43 0 chrX 31399047 31399473 -135250823 + L1_Mur2 LINE L1 383 814 -6272 3 824 1293 116 24 12 chrX 31399476 31399730 -135250566 + L1_Mur2 LINE L1 1484 1740 -4137 3 824 5225 174 9 124 chrX 31399725 31400438 -135249858 + L1_Mur2 LINE L1 2171 2868 -3012 3 824 1809 204 76 2 chrX 31400438 31400846 -135249450 - BGLII_A LTR ERVK -7 438 1 3 824 5225 174 9 124 chrX 31400846 31401766 -135248530 + L1_Mur2 LINE L1 2869 3771 -2109 3 824 4265 217 53 4 chrX 31402212 31402725 -135247571 + L1VL4 LINE L1 869 1410 -4476 3 824 2120 103 6 0 chrX 31402725 31403036 -135247260 + L1_Mus1 LINE L1 6255 6567 0 3 824 4265 188 65 8 chrX 31403036 31403878 -135246418 + L1VL4 LINE L1 1411 2304 -3582 3 824 2022 265 71 54 chrX 31403881 31404511 -135245785 + RLTR26 LTR ERVK 2 642 0 4 824 1330 129 15 23 chrX 31404518 31404780 -135245516 + L1_Mur2 LINE L1 2308 2567 -3319 4 824 30637 80 2 5 chrX 31404782 31410089 -135240207 + L1Md_F2 LINE L1 199 5589 -297 4 824 7709 56 15 2 chrX 31410090 31411072 -135239224 + L1Md_F2 LINE L1 5591 6585 0 4 824 267 220 33 17 chrX 31411440 31411500 -135238796 + MLT1G3 LTR MaLR 421 481 -114 4 824 273 119 0 0 chrX 31411501 31411543 -135238753 + (A)n Simple_repeat Simple_repeat 1 42 0 4 824 1804 230 6 2 chrX 31411543 31412036 -135238260 + MusHAL1 LINE L1 1347 1841 -871 4 824 36181 16 2 7 chrX 31412033 31417213 -135233083 + L1Md_A LINE L1 439 5585 -298 4 824 8863 12 1 0 chrX 31417214 31418209 -135232087 + L1Md_A LINE L1 5587 6582 0 4 824 213 39 0 0 chrX 31418213 31418239 -135232057 + (A)n Simple_repeat Simple_repeat 1 26 0 4 824 25425 30 1 0 chrX 31418449 31421647 -135228649 + L1Md_T LINE L1 2387 5586 -297 4 824 8272 40 1 0 chrX 31421647 31422641 -135227655 + L1Md_T LINE L1 5587 6581 -1 4 824 2518 142 128 20 chrX 31422641 31423236 -135227060 + L1_Mur2 LINE L1 3038 3696 -2190 4 824 587 222 43 0 chrX 31423239 31423356 -135226940 + ETnERV2-int LTR ERVK 7071 7192 -214 4 824 2767 185 11 0 chrX 31423740 31424302 -135225994 + L1_Mur2 LINE L1 3684 4251 -1626 4 824 1288 112 0 5 chrX 31424302 31424490 -135225806 + B2_Mm2 SINE B2 1 187 -8 4 824 270 0 0 0 chrX 31424567 31424597 -135225699 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 4 824 917 148 0 0 chrX 31424606 31424741 -135225555 - B1_Mus2 SINE Alu -8 139 5 4 824 3997 158 44 7 chrX 31424748 31425553 -135224743 + L1_Mur2 LINE L1 4922 5792 -388 4 824 2626 195 30 11 chrX 31425561 31426094 -135224202 + Lx4A LINE L1 6515 7057 -1 4 824 24 0 0 0 chrX 31426094 31426118 -135224178 + AT_rich Low_complexity Low_complexity 1 24 0 4 824 4225 211 42 13 chrX 31426743 31427613 -135222683 - RMER19B LTR ERVK -6 896 1 4 824 222 62 0 0 chrX 31430798 31430830 -135219466 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 4 824 691 98 27 20 chrX 31431681 31431827 -135218469 + (TA)n Simple_repeat Simple_repeat 2 148 0 4 824 6329 119 12 2 chrX 31432444 31433552 -135216744 - L1_Mus3 LINE L1 0 6638 5515 4 824 16900 158 21 18 chrX 31433570 31435892 -135214404 - L1_Mus3 LINE L1 -1270 4613 2278 4 824 2586 78 6 3 chrX 31435892 31436237 -135214059 + ORR1A1 LTR MaLR 1 346 0 4 824 16900 158 21 18 chrX 31436237 31436437 -135213859 - L1_Mus3 LINE L1 -3606 2277 2071 4 824 180 0 0 0 chrX 31436437 31436457 -135213839 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 824 16900 170 24 18 chrX 31436457 31438167 -135212129 - L1_Mus3 LINE L1 -3813 2070 361 4 824 943 245 57 9 chrX 31438626 31438836 -135211460 + RLTR41 LTR ERV1 227 446 0 4 824 1379 223 56 6 chrX 31438840 31439170 -135211126 - ORR1B1-int LTR MaLR -852 728 325 4 824 2831 113 75 2 chrX 31439170 31439666 -135210630 - RLTR47_MM LTR ERV1 0 532 1 4 824 189 0 0 0 chrX 31439952 31439973 -135210323 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 4 824 1691 178 39 34 chrX 31440273 31440657 -135209639 + LTRIS4 LTR ERV1 122 507 0 4 824 2255 152 17 22 chrX 31440784 31441195 -135209101 + RLTR9E LTR ERVK 1 409 0 4 824 633 208 18 79 chrX 31441204 31441464 -135208832 + MMETn-int LTR ERVK 10 317 -2997 4 824 308 100 0 20 chrX 31441519 31441570 -135208726 + ETnERV2-int LTR ERVK 2091 2140 -5104 4 824 272 111 0 0 chrX 31442020 31442065 -135208231 + RMER16-int LTR ERVK 144 188 -5218 4 824 597 165 26 9 chrX 31442140 31442256 -135208040 + RMER16-int LTR ERVK 1089 1206 -4200 4 824 511 258 0 61 chrX 31442273 31442438 -135207858 + ETnERV2-int LTR ERVK 2454 2608 -4798 4 824 13058 135 35 3 chrX 31442438 31443269 -135207027 + ETnERV2-int LTR ERVK 3055 3932 -3474 4 824 585 42 0 0 chrX 31443269 31443341 -135206955 + (TA)n Simple_repeat Simple_repeat 2 73 0 4 824 21408 112 22 29 chrX 31443341 31445168 -135205128 + ETnERV2-int LTR ERVK 3933 5778 -1628 4 824 1251 101 77 11 chrX 31445168 31445327 -135204969 + B2_Mm1t SINE B2 1 160 -33 4 824 193 0 29 59 chrX 31445327 31445361 -135204935 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 4 824 1251 101 77 11 chrX 31445361 31445382 -135204914 + B2_Mm1t SINE B2 161 193 0 4 824 21408 112 22 29 chrX 31445382 31446105 -135204191 + ETnERV2-int LTR ERVK 5779 6421 -985 4 824 524 93 0 26 chrX 31446316 31446393 -135203903 + ETnERV2-int LTR ERVK 7331 7405 -1 4 824 2651 140 7 17 chrX 31446393 31446806 -135203490 + RLTR9E LTR ERVK 1 409 0 4 824 9789 113 81 13 chrX 31446896 31449662 -135200634 + MuRRS4-int LTR ERV1 180 3132 -1931 4 824 2938 15 95 6 chrX 31449662 31449999 -135200297 + IAPLTR1_Mm LTR ERVK 1 367 0 4 824 1035 119 74 0 chrX 31449999 31450175 -135200121 + IAPEz-int LTR ERVK 8 196 -6285 4 824 6736 77 155 34 chrX 31450146 31451308 -135198988 + IAPEz-int LTR ERVK 67 1313 -5168 4 824 29343 23 1 1 chrX 31451306 31454578 -135195718 + IAPEz-int LTR ERVK 3209 6481 0 4 824 2952 12 95 6 chrX 31454578 31454915 -135195381 + IAPLTR1_Mm LTR ERVK 1 367 0 4 824 5431 52 9 1 chrX 31454915 31455570 -135194726 + MuRRS4-int LTR ERV1 3123 3783 -1280 4 824 589 263 198 36 chrX 31455570 31456015 -135194281 + L1M2 LINE L1 4299 4815 -1328 4 824 256 164 0 29 chrX 31456034 31456103 -135194193 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 4 824 3159 280 83 45 chrX 31456106 31456447 -135193849 + Lx8 LINE L1 6172 6509 -964 4 824 489 47 0 0 chrX 31456447 31456511 -135193785 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 824 3159 280 83 45 chrX 31456511 31457063 -135193233 + Lx8 LINE L1 6510 7118 -355 4 824 1195 83 0 0 chrX 31457063 31457208 -135193088 + B1_Mus2 SINE Alu 1 145 -2 4 824 3159 280 83 45 chrX 31457208 31457235 -135193061 + Lx8 LINE L1 7119 7121 -352 4 12 693 56 0 0 chrX 31457235 31457325 -135192971 + (GAAA)n Simple_repeat Simple_repeat 2 91 0 4 825 3159 280 83 45 chrX 31457325 31457654 -135192642 + Lx8 LINE L1 7122 7470 -3 4 825 1369 263 56 14 chrX 31457772 31458127 -135192169 + ORR1D2 LTR MaLR 1 370 0 4 825 802 261 37 25 chrX 31458127 31458364 -135191932 + ORR1D2-int LTR MaLR 1 240 -1130 4 825 422 231 97 146 chrX 31458364 31458795 -135191501 - RMER17C LTR ERVK 0 410 1 4 825 634 244 77 46 chrX 31458795 31459015 -135191281 + ORR1D2-int LTR MaLR 230 471 -1038 4 825 2246 145 67 6 chrX 31459015 31459361 -135190935 + ORR1B2 LTR MaLR 1 367 0 4 825 630 235 62 91 chrX 31459361 31459482 -135190814 + ORR1D2-int LTR MaLR 472 621 -749 4 825 19325 95 4 1 chrX 31459484 31462295 -135188001 - L1_Mm LINE L1 -1937 3946 1129 4 825 13384 91 3 1 chrX 31462293 31463499 -135186797 + L1_Mm LINE L1 3940 5148 -735 4 825 180 0 0 0 chrX 31463499 31463519 -135186777 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 4 825 13384 91 3 1 chrX 31463519 31464137 -135186159 + L1_Mm LINE L1 5149 5766 -117 4 825 239 246 0 17 chrX 31464139 31464197 -135186099 - Lx9 LINE L1 -387 7257 7201 4 825 4491 148 9 25 chrX 31464230 31465175 -135185121 - L1Md_A LINE L1 -4460 1423 498 4 825 693 114 73 0 chrX 31465176 31465299 -135184997 + L1Md_F2 LINE L1 6450 6581 -1 4 825 1004 290 51 34 chrX 31465302 31465343 -135184953 + Lx8 LINE L1 6138 6191 -1282 4 825 423 0 0 0 chrX 31465343 31465390 -135184906 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 825 1004 290 51 34 chrX 31465390 31465758 -135184538 + Lx8 LINE L1 6192 6554 -919 4 825 1549 165 98 100 chrX 31465802 31466232 -135184064 + RMER16 LTR ERVK 105 533 0 4 825 740 338 32 24 chrX 31466232 31466300 -135183996 + Lx8 LINE L1 6594 6666 -807 4 825 1891 176 31 116 chrX 31466300 31466782 -135183514 - RMER10A LTR ERVL 0 442 2 4 825 740 338 32 24 chrX 31466782 31466837 -135183459 + Lx8 LINE L1 6667 6720 -753 4 825 1884 171 128 93 chrX 31466837 31467268 -135183028 - RLTR41 LTR ERV1 0 446 1 4 825 740 338 32 24 chrX 31467268 31467513 -135182783 + Lx8 LINE L1 6721 6966 -507 4 825 287 256 0 0 chrX 31467527 31467591 -135182705 + B1_Mus1 SINE Alu 1 64 -85 4 825 994 299 46 122 chrX 31467589 31468244 -135182052 - RLTR18 LTR ERVK -9 607 3 4 825 325 230 138 0 chrX 31468249 31468336 -135181960 + B1_Mur2 SINE Alu 49 147 -2 4 825 1056 81 52 0 chrX 31468368 31468504 -135181792 + B1_Mm SINE Alu 3 145 -2 4 825 960 105 0 0 chrX 31468504 31468647 -135181649 + (GAAA)n Simple_repeat Simple_repeat 2 144 0 4 825 1288 299 63 48 chrX 31468649 31469101 -135181195 + Lx7 LINE L1 5699 6159 -1537 4 825 3322 96 22 39 chrX 31469101 31469591 -135180705 + RLTR45 LTR ERVK 1 482 0 4 825 1288 299 63 48 chrX 31469591 31469649 -135180647 + Lx7 LINE L1 6160 6208 -1488 4 825 1309 131 0 37 chrX 31469649 31469863 -135180433 - Lx2 LINE L1 0 6997 6792 4 825 1288 299 63 48 chrX 31469863 31469956 -135180340 + Lx7 LINE L1 6209 6312 -1384 4 825 899 80 14 0 chrX 31470566 31470704 -135179592 + Lx LINE L1 6511 6650 -4 4 825 745 117 16 8 chrX 31470791 31470920 -135179376 + Lx4A LINE L1 6910 7039 -19 4 825 365 58 19 0 chrX 31470920 31470972 -135179324 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 4 825 640 179 16 41 chrX 31471053 31471175 -135179121 + PB1D9 SINE Alu 1 119 -1 4 825 695 180 78 0 chrX 31471369 31471497 -135178799 - B1_Mur2 SINE Alu 0 149 12 4 825 1274 146 28 28 chrX 31471536 31471747 -135178549 - Lx9 LINE L1 -624 7020 6810 4 825 480 151 22 55 chrX 31471746 31471837 -135178459 + Lx9 LINE L1 7130 7217 -427 4 825 2520 149 56 12 chrX 31471839 31472268 -135178028 - RLTR11B LTR ERVK -3 450 3 4 825 1156 197 98 0 chrX 31472270 31472575 -135177721 + Lx9 LINE L1 7309 7643 -1 4 825 283 355 38 31 chrX 31472623 31472783 -135177513 + Lx9 LINE L1 7266 7426 -218 4 825 447 298 32 53 chrX 31473071 31473259 -135177037 + RLTR23 LTR ERV1 247 430 0 4 825 301 291 8 106 chrX 31473288 31473411 -135176885 - RSINE1 SINE B4 0 165 55 4 825 1226 69 7 0 chrX 31473881 31474026 -135176270 + B1_Mus2 SINE Alu 2 147 0 4 825 229 221 159 14 chrX 31474045 31474114 -135176182 + PB1 SINE Alu 21 99 -28 4 825 2430 129 16 69 chrX 31474058 31474491 -135175805 + MT2B LTR ERVL 192 601 0 4 825 1094 237 140 48 chrX 31474491 31474754 -135175542 - ORR1B2 LTR MaLR -75 292 1 4 825 243 0 0 0 chrX 31474840 31474867 -135175429 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 825 1093 103 0 20 chrX 31474878 31475026 -135175270 - B1_Mus2 SINE Alu -2 145 1 4 825 233 37 0 0 chrX 31475256 31475283 -135175013 - L1Md_F2 LINE L1 -752 5830 5804 4 825 861 71 0 17 chrX 31475271 31475386 -135174910 + L1Md_F2 LINE L1 6156 6268 -314 4 825 3167 18 0 0 chrX 31475386 31475723 -135174573 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 825 42434 13 1 0 chrX 31475723 31480348 -135169948 - IAPEz-int LTR ERVK 0 6481 1853 4 825 2857 118 55 38 chrX 31532821 31533295 -135117001 + RLTR45 LTR ERVK 1 482 0 1 825 2983 85 9 24 chrX 31533850 31534271 -135116025 - L1Md_F2 LINE L1 -12 6570 6156 2 825 1121 90 0 20 chrX 31534516 31534664 -135115632 + B1_Mus2 SINE Alu 1 145 -2 3 825 207 0 0 0 chrX 31534675 31534698 -135115598 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 825 1060 229 158 48 chrX 31534784 31535047 -135115249 + ORR1B2 LTR MaLR 1 298 -69 5 825 2385 132 16 69 chrX 31535047 31535480 -135114816 - MT2B LTR ERVL 0 601 192 6 825 229 221 159 14 chrX 31535424 31535493 -135114803 - PB1 SINE Alu -28 99 21 7 825 1196 69 7 7 chrX 31535512 31535658 -135114638 - B1_Mus2 SINE Alu 0 147 2 8 825 305 292 15 98 chrX 31536118 31536251 -135114045 + RSINE1 SINE B4 44 165 0 9 825 429 219 31 20 chrX 31536280 31536378 -135113918 - RLTR23 LTR ERV1 0 430 332 1 825 315 335 38 31 chrX 31536760 31536920 -135113376 - Lx9 LINE L1 -218 7426 7266 1 825 1078 207 98 0 chrX 31536968 31537273 -135113023 - Lx9 LINE L1 -1 7643 7309 1 825 2548 142 56 12 chrX 31537274 31537703 -135112593 + RLTR11B LTR ERVK 3 450 -3 1 825 482 151 22 55 chrX 31537705 31537796 -135112500 - Lx9 LINE L1 -427 7217 7130 1 825 1294 141 28 28 chrX 31537795 31538006 -135112290 + Lx9 LINE L1 6810 7020 -624 1 825 240 279 52 104 chrX 31538037 31538133 -135112163 + MT2B LTR ERVL 167 257 -344 1 825 743 156 78 0 chrX 31538047 31538175 -135112121 + B1_Mur2 SINE Alu 12 149 0 1 825 610 203 16 41 chrX 31538371 31538494 -135111802 - PB1D9 SINE Alu 0 120 1 1 825 297 0 0 0 chrX 31538575 31538608 -135111688 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1 825 800 116 22 7 chrX 31538608 31538747 -135111549 - Lx LINE L1 -8 7050 6910 1 825 876 99 14 0 chrX 31538837 31538979 -135111317 - Lx LINE L1 0 6654 6511 1 825 1265 307 56 40 chrX 31539591 31539684 -135110612 - Lx7 LINE L1 -1384 6312 6209 1 825 1312 136 0 33 chrX 31539684 31539897 -135110399 + Lx2 LINE L1 6792 6997 0 2 825 1265 307 56 40 chrX 31539897 31539954 -135110342 - Lx7 LINE L1 -1488 6208 6160 1 825 3322 96 22 39 chrX 31539954 31540444 -135109852 - RLTR45 LTR ERVK 0 482 1 2 825 1265 307 56 40 chrX 31540444 31540896 -135109400 - Lx7 LINE L1 -1537 6159 5699 1 825 880 97 14 14 chrX 31540898 31541044 -135109252 + (TTTC)n Simple_repeat Simple_repeat 3 148 0 2 825 1052 90 45 0 chrX 31541046 31541179 -135109117 - B1_Mm SINE Alu -6 141 3 2 825 325 230 138 0 chrX 31541211 31541298 -135108998 - B1_Mur2 SINE Alu -2 147 49 2 825 514 320 34 79 chrX 31541303 31541568 -135108728 + RLTR18 LTR ERVK 3 255 -361 2 825 828 294 45 35 chrX 31541651 31541940 -135108356 + RLTR18B LTR ERVK 193 484 -28 2 825 263 274 0 0 chrX 31541956 31542020 -135108276 - B1F2 SINE Alu -85 64 1 2 825 213 357 29 0 chrX 31541960 31542030 -135108266 - ID_B1 SINE B4 -83 141 70 2 825 699 342 35 27 chrX 31542034 31542279 -135108017 - Lx8 LINE L1 -507 6966 6721 2 825 1908 169 128 93 chrX 31542279 31542710 -135107586 + RLTR41 LTR ERV1 1 446 0 3 825 699 342 35 27 chrX 31542710 31542765 -135107531 - Lx8 LINE L1 -753 6720 6667 2 825 1906 174 31 116 chrX 31542765 31543247 -135107049 + RMER10A LTR ERVL 2 442 0 3 825 699 342 35 27 chrX 31543247 31543315 -135106981 - Lx8 LINE L1 -807 6666 6594 2 825 1577 165 98 98 chrX 31543315 31543744 -135106552 - RMER16 LTR ERVK 0 533 105 3 825 982 301 25 41 chrX 31543769 31544212 -135106084 - Lx8 LINE L1 -900 6573 6138 2 825 697 114 73 0 chrX 31544215 31544338 -135105958 - L1Md_F2 LINE L1 -1 6581 6450 3 825 4492 142 13 25 chrX 31544339 31545281 -135105015 + L1Md_A LINE L1 498 1423 -4460 3 825 254 263 0 0 chrX 31545314 31545371 -135104925 + Lx9 LINE L1 7201 7257 -387 3 825 13257 94 1 10 chrX 31545373 31547218 -135103078 - L1_Mm LINE L1 -116 5767 3940 3 825 18673 100 2 20 chrX 31547224 31550079 -135100217 + L1_Mm LINE L1 1147 3946 -1937 3 825 614 266 29 41 chrX 31550081 31550203 -135100093 - ORR1D2-int LTR MaLR -749 621 472 3 825 2183 151 67 6 chrX 31550203 31550549 -135099747 - ORR1B2 LTR MaLR 0 367 1 3 825 622 250 77 46 chrX 31550549 31550769 -135099527 - ORR1D2-int LTR MaLR -1038 471 230 3 825 599 215 98 20 chrX 31550769 31550936 -135099360 + RMER17C LTR ERVK 1 185 -225 3 825 816 59 25 32 chrX 31550936 31551094 -135099202 + (TTCTC)n Simple_repeat Simple_repeat 5 161 0 4 825 599 215 98 20 chrX 31551094 31551130 -135099166 + RMER17C LTR ERVK 186 220 -190 3 825 771 266 9 27 chrX 31551234 31551454 -135098842 - ORR1D2-int LTR MaLR -1154 216 1 3 825 1349 263 56 20 chrX 31551454 31551811 -135098485 - ORR1D2 LTR MaLR 0 370 1 3 825 3082 276 84 50 chrX 31551930 31552259 -135098037 - Lx8 LINE L1 -2 7471 7123 4 825 869 44 0 9 chrX 31552259 31552374 -135097922 + (TTTC)n Simple_repeat Simple_repeat 2 115 0 4 825 3082 276 84 50 chrX 31552374 31552404 -135097892 - Lx8 LINE L1 -351 7122 7120 4 825 1204 83 0 0 chrX 31552404 31552549 -135097747 - B1_Mus2 SINE Alu -2 145 1 4 825 3082 276 84 50 chrX 31552549 31553101 -135097195 - Lx8 LINE L1 -354 7119 6511 4 825 357 24 0 0 chrX 31553101 31553143 -135097153 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 825 3082 276 84 50 chrX 31553143 31553486 -135096810 - Lx8 LINE L1 -963 6510 6173 4 825 295 145 0 28 chrX 31553493 31553564 -135096732 + (TA)n Simple_repeat Simple_repeat 2 70 0 4 825 589 263 198 36 chrX 31553583 31554028 -135096268 - L1M2 LINE L1 -1328 4815 4299 4 825 14032 102 64 11 chrX 31554028 31557465 -135092831 - MuRRS4-int LTR ERV1 -1276 3787 170 4 825 2364 152 17 12 chrX 31557546 31557953 -135092343 - RLTR9E LTR ERVK 0 409 1 4 825 414 103 0 29 chrX 31557955 31558025 -135092271 - ETnERV2-int LTR ERVK -3 7403 7336 4 825 21161 110 21 28 chrX 31558241 31558963 -135091333 - ETnERV2-int LTR ERVK -984 6422 5780 4 825 1097 107 83 11 chrX 31558963 31558984 -135091312 - B2_Mm1t SINE B2 0 193 161 4 825 193 0 29 59 chrX 31558984 31559018 -135091278 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 5 825 1097 107 83 11 chrX 31559018 31559176 -135091120 - B2_Mm1t SINE B2 -33 160 1 4 825 21161 110 21 28 chrX 31559176 31561010 -135089286 - ETnERV2-int LTR ERVK -1627 5779 3934 4 825 504 0 0 0 chrX 31561010 31561066 -135089230 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 825 21161 110 21 28 chrX 31561066 31561900 -135088396 - ETnERV2-int LTR ERVK -3473 3933 3056 4 825 408 208 0 73 chrX 31561900 31562009 -135088287 - ETnERV2-int LTR ERVK -4798 2608 2508 4 825 597 165 26 9 chrX 31562060 31562176 -135088120 - RMER16-int LTR ERVK -4200 1206 1089 5 825 272 111 0 0 chrX 31562251 31562296 -135088000 - RMER16-int LTR ERVK -5218 188 144 5 825 308 100 0 20 chrX 31562746 31562797 -135087499 - ETnERV2-int LTR ERVK -5104 2140 2091 4 825 647 205 18 79 chrX 31562852 31563112 -135087184 - MMETn-int LTR ERVK -2997 317 10 5 825 2287 149 17 22 chrX 31563121 31563532 -135086764 - RLTR9E LTR ERVK 0 409 1 5 825 1728 180 39 29 chrX 31563659 31564042 -135086254 - LTRIS4 LTR ERV1 0 507 121 5 825 189 0 0 0 chrX 31564342 31564363 -135085933 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 5 825 2888 107 75 2 chrX 31564650 31565146 -135085150 + RLTR47_MM LTR ERV1 1 532 0 5 825 1347 230 56 6 chrX 31565146 31565476 -135084820 + ORR1B1-int LTR MaLR 325 728 -852 5 825 935 243 58 10 chrX 31565480 31565688 -135084608 - RLTR41 LTR ERV1 0 446 229 5 825 17095 157 21 37 chrX 31566152 31567854 -135082442 + L1_Mus3 LINE L1 410 2070 -3813 5 825 180 0 0 0 chrX 31567854 31567874 -135082422 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 825 17095 155 22 17 chrX 31567874 31568074 -135082222 + L1_Mus3 LINE L1 2071 2277 -3606 5 825 2556 87 6 3 chrX 31568074 31568419 -135081877 - ORR1A1 LTR MaLR 0 346 1 6 825 17095 155 22 17 chrX 31568419 31570739 -135079557 + L1_Mus3 LINE L1 2278 4613 -1270 5 825 6296 117 12 1 chrX 31570757 31571857 -135078439 + L1_Mus3 LINE L1 5515 6632 -6 5 825 180 159 28 42 chrX 31572376 31572448 -135077848 + (TA)n Simple_repeat Simple_repeat 1 71 0 6 825 228 100 0 0 chrX 31573319 31573359 -135076937 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 6 825 4188 213 42 13 chrX 31576573 31577443 -135072853 + RMER19B LTR ERVK 1 896 -6 6 825 2545 203 30 11 chrX 31578092 31578625 -135071671 - Lx4A LINE L1 -1 7057 6515 6 825 3799 157 66 6 chrX 31578625 31579420 -135070876 - Lx4A LINE L1 -1168 5882 4922 6 825 916 148 0 0 chrX 31579427 31579562 -135070734 + B1_Mus2 SINE Alu 5 139 -8 6 825 429 20 0 0 chrX 31579571 31579621 -135070675 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 6 825 1368 96 0 5 chrX 31579698 31579886 -135070410 - B2_Mm2 SINE B2 -8 187 1 6 825 2825 178 11 0 chrX 31579886 31580448 -135069848 - Lx4A LINE L1 -1626 4251 3684 6 825 586 214 43 0 chrX 31580832 31580949 -135069347 - ETnERV2-int LTR ERVK -214 7192 7071 6 825 2456 151 123 18 chrX 31580952 31581552 -135068744 - Lx4A LINE L1 -2190 3696 3034 6 825 33765 67 2 4 chrX 31581548 31587850 -135062446 - L1Md_A LINE L1 -1 6584 199 7 825 1350 129 15 15 chrX 31587852 31588112 -135062184 - Lx4A LINE L1 -3319 2567 2308 6 103 1868 286 68 51 chrX 31588119 31588749 -135061547 - RLTR26 LTR ERVK 0 642 2 7 826 4221 191 65 7 chrX 31588752 31589592 -135060704 - L1VL4 LINE L1 -3582 2304 1411 7 826 2045 110 10 0 chrX 31589592 31589902 -135060394 - L1_Mus1 LINE L1 0 6567 6255 7 826 4221 218 54 4 chrX 31589902 31590416 -135059880 - L1VL4 LINE L1 -4476 1410 869 7 826 5236 163 11 92 chrX 31590862 31591783 -135058513 - L1_Mur2 LINE L1 -2107 3779 2866 7 826 1952 196 48 2 chrX 31591783 31592202 -135058094 + BGLII_A LTR ERVK 1 438 -7 7 826 5236 163 11 92 chrX 31592202 31592923 -135057373 - L1_Mur2 LINE L1 -2107 2865 2149 7 826 1288 112 23 23 chrX 31592908 31593165 -135057131 - L1_Mur2 LINE L1 -4137 1740 1484 7 826 1883 196 43 0 chrX 31593168 31593594 -135056702 - L1_Mur2 LINE L1 -6272 814 383 7 826 3001 222 30 55 chrX 31593620 31593828 -135056468 + RMER6D LTR ERVK 16 230 -490 7 826 2305 69 122 11 chrX 31593828 31594179 -135056117 + RLTR10 LTR ERVK 1 390 0 7 826 3001 222 30 55 chrX 31594179 31594265 -135056031 + RMER6D LTR ERVK 231 314 -406 7 826 1897 133 92 3 chrX 31594265 31594603 -135055693 - RLTR9A LTR ERVK 0 368 1 7 826 3001 222 30 55 chrX 31594603 31594661 -135055635 + RMER6D LTR ERVK 315 362 -358 7 826 198 0 0 0 chrX 31594661 31594683 -135055613 + (TGG)n Simple_repeat Simple_repeat 2 23 0 7 826 3001 222 30 55 chrX 31594683 31595051 -135055245 + RMER6D LTR ERVK 363 720 0 7 826 320 358 65 64 chrX 31595340 31595928 -135054368 - L2a LINE L2 -40 3386 2796 8 826 23 33 0 0 chrX 31595972 31596002 -135054294 + AT_rich Low_complexity Low_complexity 1 30 0 8 826 1726 138 101 39 chrX 31596704 31597042 -135053254 - ORR1B2 LTR MaLR -8 359 1 8 826 582 227 35 0 chrX 31597831 31597972 -135052324 + B1_Mur1 SINE Alu 2 147 -2 8 826 3527 130 69 16 chrX 31598062 31598181 -135052115 - Lx LINE L1 0 6654 6536 8 826 204 40 0 0 chrX 31598181 31598206 -135052090 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 8 826 3527 130 69 16 chrX 31598206 31598697 -135051599 - Lx LINE L1 -119 6535 6014 8 826 1782 188 0 9 chrX 31598697 31599020 -135051276 - ORR1A3 LTR MaLR -6 320 1 8 826 9852 152 61 14 chrX 31599020 31600895 -135049401 - ORR1A3-int LTR MaLR 0 1963 1 8 826 2108 117 29 45 chrX 31600897 31601292 -135049004 - MT2B2 LTR ERVL -2 582 155 8 826 303 340 68 27 chrX 31601292 31601440 -135048856 - RMER15 LTR ERVL 0 575 422 8 826 1975 159 13 0 chrX 31601825 31602139 -135048157 - ORR1A3 LTR MaLR -8 318 1 8 826 560 291 26 68 chrX 31602207 31602399 -135047897 - MTE2b LTR MaLR -15 364 181 9 826 1520 231 87 12 chrX 31602402 31602748 -135047548 + ORR1D1 LTR MaLR 3 374 0 9 826 706 271 28 11 chrX 31602748 31602925 -135047371 - MTE2b LTR MaLR -195 184 5 9 826 487 326 62 55 chrX 31603055 31603311 -135046985 + MER106B DNA MER1_type 1 258 -801 9 826 231 356 16 41 chrX 31603520 31603643 -135046653 + MER106B DNA MER1_type 266 385 -674 9 826 425 259 144 63 chrX 31603659 31604042 -135046254 + MER106B DNA MER1_type 445 858 -201 9 826 1049 109 0 0 chrX 31604495 31604642 -135045654 - B1_Mus1 SINE Alu -1 147 1 9 826 402 74 0 0 chrX 31604719 31604773 -135045523 + (TG)n Simple_repeat Simple_repeat 2 55 0 9 826 684 332 68 0 chrX 31604840 31605045 -135045251 - B4A SINE B4 -73 219 1 9 826 363 288 84 18 chrX 31605138 31605304 -135044992 - CYRA11_Mm Unknown Y-chromosome -225 392 216 9 826 801 184 114 6 chrX 31605158 31605333 -135044963 + URR1A DNA MER1_type 33 226 0 9 826 471 218 59 27 chrX 31605403 31605524 -135044772 + MTD LTR MaLR 282 405 -14 9 826 573 179 27 0 chrX 31605580 31605692 -135044604 + ORR1C2 LTR MaLR 1 115 -263 9 826 2028 99 64 72 chrX 31605696 31606055 -135044241 - RLTR10B2 LTR ERVK -9 356 1 1 826 1567 124 79 0 chrX 31606056 31606321 -135043975 + ORR1C2 LTR MaLR 95 380 -4 9 826 3011 122 12 37 chrX 31607242 31607729 -135042567 + MT2C_Mm LTR ERVL 1 475 0 1 826 643 257 75 70 chrX 31608004 31608121 -135042175 + L1_Mur3 LINE L1 894 1006 -6722 1 826 237 43 42 21 chrX 31608121 31608169 -135042127 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 1 826 643 264 66 56 chrX 31608169 31608581 -135041715 + L1_Mur3 LINE L1 1007 1429 -4451 1 826 537 143 135 0 chrX 31608598 31608724 -135041572 + Lx5 LINE L1 6908 7050 0 1 826 216 0 0 0 chrX 31608792 31608816 -135041480 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 826 5179 111 16 55 chrX 31608822 31609730 -135040566 + RLTR13A3 LTR ERVK 106 978 0 1 826 995 122 7 0 chrX 31609766 31609913 -135040383 - B1_Mus1 SINE Alu 0 148 1 1 826 1968 226 32 47 chrX 31609915 31610625 -135039671 + L1_Mur3 LINE L1 1459 2158 -3722 1 826 6771 101 11 3 chrX 31610631 31611658 -135038638 + L1_Mus3 LINE L1 5604 6638 0 1 826 460 139 0 29 chrX 31611676 31611780 -135038516 + GA-rich Low_complexity Low_complexity 4 104 0 1 826 2575 238 45 69 chrX 31611781 31611936 -135038360 + L1_Mur3 LINE L1 3047 3187 -2693 1 826 972 143 21 52 chrX 31611936 31612128 -135038168 + B2_Mm2 SINE B2 2 187 -8 1 826 2575 238 45 69 chrX 31612128 31612549 -135037747 + L1_Mur3 LINE L1 3188 3620 -2260 1 826 6265 128 19 15 chrX 31612549 31613568 -135036728 - RLTR13D5 LTR ERVK 0 1023 1 1 826 2575 238 45 69 chrX 31613568 31613848 -135036448 + L1_Mur3 LINE L1 3621 3889 -1991 1 826 893 180 0 0 chrX 31613848 31613998 -135036298 - B1_Mur4 SINE Alu 0 150 1 1 826 2575 238 45 69 chrX 31613998 31614192 -135036104 + L1_Mur3 LINE L1 3890 4073 -1807 1 826 693 189 0 15 chrX 31614196 31614330 -135035966 + MT2B LTR ERVL 1 132 -469 1 826 764 122 0 0 chrX 31614385 31614500 -135035796 + ORR1A2 LTR MaLR 213 327 0 1 826 2406 77 0 0 chrX 31614862 31615202 -135035094 - L1_Mm LINE L1 -1354 4529 4190 1 826 5385 120 20 5 chrX 31615220 31616059 -135034237 + L1_Mus3 LINE L1 5787 6638 0 1 826 540 266 148 10 chrX 31616081 31616392 -135033904 + L1MD2 LINE L1 5638 5991 -368 1 826 23 33 0 0 chrX 31616653 31616683 -135033613 + AT_rich Low_complexity Low_complexity 1 30 0 1 826 35622 36 4 1 chrX 31618163 31623422 -135026874 - L1Md_T LINE L1 -2 6580 1301 1 826 1451 174 10 0 chrX 31623419 31623717 -135026579 - L1Md_T LINE L1 -6053 563 263 1 826 306 0 0 0 chrX 31624424 31624458 -135025838 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 826 534 75 0 0 chrX 31624458 31624537 -135025759 + (TG)n Simple_repeat Simple_repeat 1 80 0 1 826 791 279 66 52 chrX 31624797 31625142 -135025154 - MTEa LTR MaLR 0 379 13 1 826 21 0 0 0 chrX 31625182 31625203 -135025093 + AT_rich Low_complexity Low_complexity 1 21 0 1 826 957 156 0 0 chrX 31625203 31625344 -135024952 + B1_Mur4 SINE Alu 1 141 -9 1 826 1025 103 0 0 chrX 31625931 31626086 -135024210 - L1_Mus1 LINE L1 -737 5146 4992 1 826 4852 71 1 25 chrX 31626083 31626893 -135023403 + L1_Mus1 LINE L1 5154 5932 -635 1 826 4237 132 8 56 chrX 31626893 31627695 -135022601 + RMER17A LTR ERVK 1 749 -2 1 826 4759 74 11 5 chrX 31627695 31628334 -135021962 + L1_Mus1 LINE L1 5925 6567 0 1 826 189 0 0 0 chrX 31628362 31628383 -135021913 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 826 603 205 160 28 chrX 31628839 31629056 -135021240 - Lx4B LINE L1 -4 7054 6788 1 826 180 0 0 0 chrX 31629057 31629077 -135021219 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 1 826 4627 161 8 3 chrX 31629167 31630042 -135020254 + L1_Mur2 LINE L1 3947 4825 -1052 1 826 4710 100 39 12 chrX 31630036 31630812 -135019484 - L1_Mur2 LINE L1 -254 5623 4827 1 826 254 179 18 0 chrX 31631320 31631376 -135018920 - MERVL_2A-int LTR ERVL -3496 2265 2209 1 826 1979 213 77 2 chrX 31631413 31631855 -135018441 + MERVL_2A-int LTR ERVL 3130 3604 -2157 1 826 26658 105 29 41 chrX 31631855 31634363 -135015933 + L1Md_F2 LINE L1 951 3476 -2407 1 826 270 0 0 0 chrX 31634363 31634393 -135015903 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 1 826 26658 106 34 47 chrX 31634393 31635157 -135015139 + L1Md_F2 LINE L1 3477 4350 -1533 1 826 3317 26 15 3 chrX 31635157 31635548 -135014748 - MTA_Mm LTR MaLR 0 396 1 1 826 26658 106 34 47 chrX 31635548 31635839 -135014457 + L1Md_F2 LINE L1 4351 4491 -1392 1 826 8009 56 0 0 chrX 31635839 31636835 -135013461 + L1Md_T LINE L1 5587 6582 0 1 826 26658 107 35 37 chrX 31636835 31638677 -135011619 + L1Md_F2 LINE L1 4492 6317 -265 1 826 855 111 34 27 chrX 31638677 31638825 -135011471 + L1Md_F2 LINE L1 6416 6564 -18 1 826 423 117 29 0 chrX 31638825 31638928 -135011368 + (TA)n Simple_repeat Simple_repeat 1 106 0 1 826 689 299 18 120 chrX 31639159 31639647 -135010649 + L1VL1 LINE L1 4 395 -6027 1 826 537 233 32 11 chrX 31639653 31639833 -135010463 + L1Md_T LINE L1 527 820 -5799 1 826 24057 135 16 39 chrX 31639837 31644800 -135005496 + L1Md_T LINE L1 747 5591 -295 1 826 7922 57 1 0 chrX 31644803 31645793 -135004503 + L1Md_T LINE L1 5595 6585 0 1 826 2457 151 124 19 chrX 31645793 31646389 -135003907 + Lx4A LINE L1 3038 3696 -2190 1 826 586 214 43 0 chrX 31646392 31646509 -135003787 + ETnERV2-int LTR ERVK 7071 7192 -214 1 826 2825 178 11 0 chrX 31646893 31647455 -135002841 + Lx4A LINE L1 3684 4251 -1626 1 826 1368 96 0 5 chrX 31647455 31647643 -135002653 + B2_Mm2 SINE B2 1 187 -8 1 826 501 17 0 0 chrX 31647720 31647778 -135002518 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 1 826 911 148 0 0 chrX 31647787 31647922 -135002374 - B1_Mus2 SINE Alu -8 139 5 1 826 3783 158 67 6 chrX 31647929 31648724 -135001572 + Lx4A LINE L1 4922 5882 -1168 1 826 2545 203 30 11 chrX 31648724 31649257 -135001039 + Lx4A LINE L1 6515 7057 -1 1 826 4231 211 42 13 chrX 31649906 31650776 -134999520 - RMER19B LTR ERVK -6 896 1 1 826 254 176 0 42 chrX 31653981 31654052 -134996244 + (TTGG)n Simple_repeat Simple_repeat 2 69 0 1 826 287 180 43 33 chrX 31654873 31654965 -134995331 + (TA)n Simple_repeat Simple_repeat 2 94 0 1 826 6288 120 12 1 chrX 31655587 31656687 -134993609 - L1_Mus3 LINE L1 -6 6632 5515 1 826 17156 153 22 22 chrX 31656705 31659043 -134991253 - L1_Mus3 LINE L1 -1270 4613 2278 1 826 2556 87 6 3 chrX 31659043 31659388 -134990908 + ORR1A1 LTR MaLR 1 346 0 1 826 17156 153 22 22 chrX 31659388 31659588 -134990708 - L1_Mus3 LINE L1 -3606 2277 2071 1 826 180 0 0 0 chrX 31659588 31659608 -134990688 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 826 17156 153 21 40 chrX 31659608 31661310 -134988986 - L1_Mus3 LINE L1 -3813 2070 410 1 826 925 248 58 10 chrX 31661774 31661982 -134988314 + RLTR41 LTR ERV1 229 446 0 1 826 1353 229 56 6 chrX 31661986 31662316 -134987980 - ORR1B1-int LTR MaLR -852 728 325 1 826 2929 105 75 2 chrX 31662316 31662812 -134987484 - RLTR47_MM LTR ERV1 0 532 1 1 826 192 40 0 0 chrX 31663096 31663121 -134987175 + (TTTTTG)n Simple_repeat Simple_repeat 4 28 0 1 826 1700 184 40 29 chrX 31663424 31663804 -134986492 + LTRIS4 LTR ERV1 124 507 0 1 826 2273 152 17 22 chrX 31663930 31664341 -134985955 + RLTR9E LTR ERVK 1 409 0 1 826 627 209 18 79 chrX 31664350 31664610 -134985686 + MMETn-int LTR ERVK 10 317 -2997 1 826 308 100 0 20 chrX 31664665 31664716 -134985580 + ETnERV2-int LTR ERVK 2091 2140 -5104 1 826 267 133 0 0 chrX 31665166 31665211 -134985085 + RMER16-int LTR ERVK 144 188 -5218 1 826 597 165 26 9 chrX 31665286 31665402 -134984894 + RMER16-int LTR ERVK 1089 1206 -4200 1 826 486 271 0 61 chrX 31665419 31665584 -134984712 + ETnERV2-int LTR ERVK 2454 2608 -4798 1 826 14783 124 29 5 chrX 31665584 31666418 -134983878 + ETnERV2-int LTR ERVK 3055 3932 -3474 1 826 393 22 0 0 chrX 31666418 31666464 -134983832 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 826 19534 102 18 16 chrX 31666464 31668298 -134981998 + ETnERV2-int LTR ERVK 3933 5778 -1628 1 826 1188 102 84 11 chrX 31668298 31668456 -134981840 + B2_Mm1t SINE B2 1 160 -33 1 826 193 0 29 59 chrX 31668456 31668490 -134981806 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 1 826 1188 102 84 11 chrX 31668490 31668509 -134981787 + B2_Mm1t SINE B2 161 191 -2 1 826 19534 147 16 40 chrX 31668509 31669236 -134981060 + ETnERV2-int LTR ERVK 5779 6220 -1186 1 826 3199 15 0 0 chrX 31669357 31669694 -134980602 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 826 57050 22 9 6 chrX 31669694 31676147 -134974149 + IAPEz-int LTR ERVK 8 6481 0 1 826 3209 12 0 0 chrX 31676147 31676484 -134973812 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 826 426 143 0 14 chrX 31676585 31676656 -134973640 + ETnERV2-int LTR ERVK 7336 7405 -1 1 826 2680 138 7 17 chrX 31676656 31677069 -134973227 + RLTR9E LTR ERVK 1 409 0 1 826 13903 102 64 11 chrX 31677159 31680588 -134969708 + MuRRS4-int LTR ERV1 180 3789 -1274 1 826 1264 137 120 6 chrX 31682298 31682654 -134967642 - RMER1A Other Other 0 1030 534 1 826 276 225 386 0 chrX 31682656 31682783 -134967513 - RMER1A Other Other -679 351 176 1 826 255 289 103 45 chrX 31682763 31682919 -134967377 - RMER1B Other Other -684 382 218 1 826 187 304 22 0 chrX 31684053 31684099 -134966197 + MER5B DNA MER1_type 1 47 -131 1 826 201 108 0 0 chrX 31684146 31684183 -134966113 + (T)n Simple_repeat Simple_repeat 1 37 0 1 826 615 264 172 39 chrX 31684293 31684700 -134965596 + L1M2 LINE L1 4355 4815 -1328 1 826 256 164 0 29 chrX 31684719 31684788 -134965508 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 1 826 3167 272 86 48 chrX 31684791 31685132 -134965164 + Lx8 LINE L1 6172 6509 -964 1 826 594 28 0 0 chrX 31685132 31685204 -134965092 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 826 3167 272 86 48 chrX 31685204 31685758 -134964538 + Lx8 LINE L1 6510 7117 -356 1 826 1204 83 0 0 chrX 31685758 31685903 -134964393 + B1_Mus2 SINE Alu 1 145 -2 1 826 3167 272 86 48 chrX 31685903 31685928 -134964368 + Lx8 LINE L1 7118 7121 -352 1 826 666 85 0 0 chrX 31685928 31686022 -134964274 + (GAAA)n Simple_repeat Simple_repeat 2 95 0 1 826 3167 272 86 48 chrX 31686022 31686351 -134963945 + Lx8 LINE L1 7122 7470 -3 1 826 1314 269 56 20 chrX 31686470 31686827 -134963469 + ORR1D2 LTR MaLR 1 370 0 1 826 1340 264 35 44 chrX 31686827 31687064 -134963232 + ORR1D2-int LTR MaLR 1 231 -1139 1 826 608 198 158 168 chrX 31687064 31687476 -134962820 - RMER17C LTR ERVK 0 410 3 1 826 1340 267 43 44 chrX 31687476 31687697 -134962599 + ORR1D2-int LTR MaLR 229 471 -1038 1 826 2261 142 67 6 chrX 31687697 31688043 -134962253 + ORR1B2 LTR MaLR 1 367 0 1 826 1083 266 28 42 chrX 31688043 31688165 -134962131 + ORR1D2-int LTR MaLR 472 621 -749 1 826 18974 99 2 10 chrX 31688167 31690988 -134959308 - L1_Mm LINE L1 -1937 3946 1147 1 826 13084 94 1 21 chrX 31690994 31692861 -134957435 + L1_Mm LINE L1 3940 5767 -116 1 826 254 263 0 0 chrX 31692863 31692920 -134957376 - Lx9 LINE L1 -387 7257 7201 1 826 4618 141 10 25 chrX 31692953 31693898 -134956398 - L1Md_A LINE L1 -4460 1423 498 1 826 696 123 49 0 chrX 31693899 31694021 -134956275 + L1Md_F2 LINE L1 6450 6577 -5 1 826 970 304 25 41 chrX 31694024 31694467 -134955829 + Lx8 LINE L1 6138 6573 -900 1 826 1579 165 97 102 chrX 31694492 31694923 -134955373 + RMER16 LTR ERVK 105 533 0 1 826 230 279 73 0 chrX 31694923 31694991 -134955305 + Lx8 LINE L1 6594 6666 -807 1 826 1920 174 31 116 chrX 31694991 31695473 -134954823 - RMER10A LTR ERVL 0 442 2 1 826 1835 224 56 21 chrX 31695530 31695959 -134954337 - RLTR41 LTR ERV1 -2 444 1 1 826 624 326 16 16 chrX 31695961 31696204 -134954092 + Lx8 LINE L1 6724 6966 -507 1 826 262 281 0 15 chrX 31696218 31696283 -134954013 + B1F2 SINE Alu 1 64 -85 1 826 952 306 40 116 chrX 31696281 31696935 -134953361 - RLTR18 LTR ERVK -10 606 3 1 826 339 218 138 0 chrX 31696940 31697027 -134953269 + B1_Mur2 SINE Alu 49 147 -2 1 826 1114 80 44 0 chrX 31697059 31697196 -134953100 + B1_Mm SINE Alu 3 145 -2 1 826 905 114 13 0 chrX 31697196 31697345 -134952951 + (GAAA)n Simple_repeat Simple_repeat 2 152 0 1 826 1274 307 56 40 chrX 31697347 31697799 -134952497 + Lx7 LINE L1 5699 6159 -1537 1 826 3302 94 25 39 chrX 31697799 31698288 -134952008 + RLTR45 LTR ERVK 1 482 0 1 826 1274 307 56 40 chrX 31698288 31698345 -134951951 + Lx7 LINE L1 6160 6208 -1488 1 826 1346 126 0 33 chrX 31698345 31698558 -134951738 - Lx2 LINE L1 0 6997 6792 1 826 1274 307 56 40 chrX 31698558 31698651 -134951645 + Lx7 LINE L1 6209 6312 -1384 1 826 890 92 14 0 chrX 31699263 31699405 -134950891 + Lx LINE L1 6511 6654 0 1 826 699 126 23 8 chrX 31699495 31699623 -134950673 + Lx4A LINE L1 6910 7039 -19 1 826 329 62 21 0 chrX 31699623 31699671 -134950625 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 1 826 614 195 16 41 chrX 31699752 31699875 -134950421 + PB1D9 SINE Alu 1 120 0 1 826 732 164 78 0 chrX 31700071 31700199 -134950097 - B1_Mur2 SINE Alu 0 149 12 2 826 1278 146 28 28 chrX 31700241 31700452 -134949844 - Lx9 LINE L1 -624 7020 6810 2 826 468 163 22 55 chrX 31700451 31700542 -134949754 + Lx9 LINE L1 7130 7217 -427 2 826 2588 137 56 12 chrX 31700544 31700973 -134949323 - RLTR11B LTR ERVK -3 450 3 2 826 1144 197 98 0 chrX 31700974 31701279 -134949017 + Lx9 LINE L1 7309 7643 -1 2 826 337 329 38 31 chrX 31701327 31701487 -134948809 + Lx9 LINE L1 7266 7426 -218 2 826 414 215 32 21 chrX 31701869 31701964 -134948332 + RLTR23 LTR ERV1 332 427 -3 2 826 302 291 8 106 chrX 31701996 31702119 -134948177 - RSINE1 SINE B4 0 165 55 2 826 1142 90 7 14 chrX 31702589 31702736 -134947560 + B1_Mus2 SINE Alu 2 147 0 2 826 229 221 159 14 chrX 31702755 31702824 -134947472 + PB1 SINE Alu 21 99 -28 2 826 2445 124 16 69 chrX 31702768 31703201 -134947095 + MT2B LTR ERVL 192 601 0 2 826 1091 217 139 54 chrX 31703201 31703464 -134946832 - ORR1B2 LTR MaLR -77 290 1 2 826 279 0 0 0 chrX 31703550 31703581 -134946715 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 826 1081 103 0 20 chrX 31703592 31703740 -134946556 - B1_Mus2 SINE Alu -2 145 1 2 826 3103 87 9 16 chrX 31703985 31704415 -134945881 + L1Md_F2 LINE L1 6156 6582 0 2 826 2896 120 50 38 chrX 31704963 31705439 -134944857 - RLTR45 LTR ERVK 0 482 1 2 826 4017 210 45 15 chrX 31708537 31709387 -134940909 + RMER19B LTR ERVK 1 875 -27 2 826 24 0 0 0 chrX 31710018 31710042 -134940254 + AT_rich Low_complexity Low_complexity 1 24 0 2 826 2708 210 31 14 chrX 31710042 31710598 -134939698 - Lx4A LINE L1 -1 7057 6493 2 826 10877 185 158 134 chrX 31710591 31711458 -134938838 - Lx4A LINE L1 -1183 5875 4252 2 826 1256 138 0 5 chrX 31711458 31711647 -134938649 - B2_Mm2 SINE B2 -7 188 1 2 826 10877 186 170 144 chrX 31711647 31713438 -134936858 - Lx4A LINE L1 -1626 4251 2443 2 826 3130 81 5 2 chrX 31713438 31713833 -134936463 - MTA_Mm LTR MaLR 0 396 1 2 826 10877 186 170 144 chrX 31713833 31713986 -134936310 - Lx4A LINE L1 -3435 2442 2288 2 826 1667 277 74 63 chrX 31713986 31714537 -134935759 - RLTR26 LTR ERVK -85 557 1 2 826 10877 186 170 144 chrX 31714537 31715395 -134934901 - Lx4A LINE L1 -3435 2287 1415 2 826 2085 130 7 0 chrX 31715395 31715702 -134934594 - L1_Mus1 LINE L1 0 6567 6259 2 826 10877 214 72 35 chrX 31715702 31716112 -134934184 - Lx4A LINE L1 -4463 1414 859 2 826 8460 124 31 6 chrX 31716550 31717433 -134932863 - L1_Mur2 LINE L1 -2107 3770 2878 2 826 2143 184 47 5 chrX 31717433 31717860 -134932436 + BGLII_A LTR ERVK 1 445 0 2 826 8460 124 31 6 chrX 31717860 31718372 -134931924 - L1_Mur2 LINE L1 -3000 2877 2342 2 826 3968 152 124 3 chrX 31718372 31719256 -134931040 - L1_Mur2 LINE L1 -4348 1532 410 2 826 347 45 0 0 chrX 31719256 31719300 -134930996 - RLTR1 LTR ERV1 0 624 581 2 826 270 139 0 0 chrX 31719317 31719360 -134930936 - L1_Mur2 LINE L1 -6519 193 151 2 103 2810 219 69 35 chrX 31719386 31719673 -134930623 + RMER6D LTR ERVK 16 314 -406 2 827 2123 145 69 6 chrX 31719673 31720019 -134930277 - RLTR9A LTR ERVK 0 368 1 2 827 2810 219 69 35 chrX 31720019 31720076 -134930220 + RMER6D LTR ERVK 315 365 -355 2 827 321 68 0 0 chrX 31720076 31720120 -134930176 + (TGG)n Simple_repeat Simple_repeat 3 46 0 2 827 2810 219 69 35 chrX 31720120 31720456 -134929840 + RMER6D LTR ERVK 366 720 0 2 827 322 385 34 50 chrX 31720750 31721358 -134928938 - L2a LINE L2 -40 3386 2791 2 827 2035 159 3 58 chrX 31721576 31721922 -134928374 - ORR1A2 LTR MaLR 0 327 1 2 827 1683 131 11 0 chrX 31721922 31722197 -134928099 - ORR1A2-int LTR MaLR 0 1963 1686 2 827 2295 128 25 0 chrX 31722197 31722516 -134927780 + ORR1A2 LTR MaLR 1 327 0 2 827 2829 178 18 20 chrX 31722516 31722904 -134927392 + ORR1A2-int LTR MaLR 1 397 -1395 2 827 2776 68 7 124 chrX 31722904 31723096 -134927200 + MTB LTR MaLR 2 182 -218 2 827 1137 75 0 0 chrX 31723096 31723242 -134927054 + B1_Mm SINE Alu 2 147 0 2 827 2776 68 7 124 chrX 31723242 31723501 -134926795 + MTB LTR MaLR 183 400 0 2 827 2829 188 36 25 chrX 31723501 31724079 -134926217 + ORR1A2-int LTR MaLR 393 1027 -936 2 827 299 342 51 0 chrX 31724352 31724469 -134925827 - ETnERV2-int LTR ERVK -210 7196 7074 2 827 1710 115 249 0 chrX 31724474 31724804 -134925492 + ORR1A2-int LTR MaLR 1019 1430 -533 2 827 393 100 125 0 chrX 31724801 31724881 -134925415 - ORR1A2 LTR MaLR -237 90 1 2 827 794 189 13 20 chrX 31725157 31725308 -134924988 + B1_Mur4 SINE Alu 1 150 0 2 827 29 0 0 0 chrX 31725543 31725572 -134924724 + AT_rich Low_complexity Low_complexity 1 29 0 2 827 1117 184 13 22 chrX 31726554 31726607 -134923689 + URR1A DNA MER1_type 1 51 -175 2 827 282 125 0 0 chrX 31726607 31726655 -134923641 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 827 1117 184 13 22 chrX 31726655 31726829 -134923467 + URR1A DNA MER1_type 52 226 0 2 827 1368 192 182 6 chrX 31727093 31727428 -134922868 - RMER10B LTR ERVL 0 398 5 2 827 1405 156 75 117 chrX 31727443 31727871 -134922425 + RMER17C LTR ERVK 1 410 0 2 827 325 212 83 66 chrX 31727937 31728058 -134922238 - RMER17C-int LTR ERVK -144 3094 2972 2 827 309 74 164 18 chrX 31728270 31728325 -134921971 - RMER10B LTR ERVL -335 63 1 2 827 442 234 114 21 chrX 31728594 31728734 -134921562 - ORR1D1 LTR MaLR -17 357 205 2 827 1755 128 272 47 chrX 31728732 31729181 -134921115 - RLTR6_Mm LTR ERV1 -68 586 37 2 827 268 194 209 0 chrX 31729221 31729288 -134921008 - RLTR6_Mm LTR ERV1 -573 81 1 2 827 36101 37 0 1 chrX 31729317 31734997 -134915299 + L1Md_T LINE L1 1 5589 -297 2 827 9166 5 0 0 chrX 31734997 31736038 -134914258 + L1Md_T LINE L1 5590 6585 0 2 827 7240 34 1 0 chrX 31736038 31736868 -134913428 - RLTR6-int LTR ERV1 -15 7763 6933 2 827 33066 36 26 0 chrX 31736863 31741076 -134909220 - RLTR6-int LTR ERV1 -3357 4421 1 2 827 1807 117 275 49 chrX 31741076 31741527 -134908769 - RLTR6_Mm LTR ERV1 -65 589 37 2 827 257 209 209 0 chrX 31741567 31741634 -134908662 - RLTR6_Mm LTR ERV1 -573 81 1 2 827 537 88 0 0 chrX 31741726 31741806 -134908490 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 2 827 405 0 0 0 chrX 31742375 31742420 -134907876 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 827 441 36 0 0 chrX 31742422 31742477 -134907819 + (GA)n Simple_repeat Simple_repeat 2 56 0 2 827 231 197 14 27 chrX 31742477 31742550 -134907746 + (TCTCTG)n Simple_repeat Simple_repeat 4 75 0 2 827 448 176 0 183 chrX 31742557 31742710 -134907586 - B1_Mus2 SINE Alu -13 134 10 2 827 1496 236 40 0 chrX 31742720 31743047 -134907249 - ORR1B1 LTR MaLR -41 353 14 2 827 503 300 25 16 chrX 31743147 31743391 -134906905 - RLTR15 LTR ERVK -111 248 3 2 827 972 158 10 13 chrX 31743831 31744024 -134906272 + L1_Mus3 LINE L1 2228 2422 -3724 2 827 14234 137 9 8 chrX 31744006 31747108 -134903188 + L1_Mus3 LINE L1 3531 6638 0 2 827 29 0 0 0 chrX 31747137 31747166 -134903130 + AT_rich Low_complexity Low_complexity 1 29 0 2 827 850 168 29 23 chrX 31749433 31749604 -134900692 + L1_Mur3 LINE L1 4589 4760 -1120 2 827 423 297 60 7 chrX 31749605 31749754 -134900542 + MTE2a-int LTR MaLR 1424 1580 0 2 827 748 254 53 26 chrX 31749756 31749982 -134900314 + MTE2a LTR MaLR 28 259 -120 2 827 377 277 0 61 chrX 31752567 31752732 -134897564 + CT-rich Low_complexity Low_complexity 4 158 0 2 827 252 0 0 0 chrX 31753084 31753112 -134897184 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 827 677 277 6 44 chrX 31753320 31753679 -134896617 - RMER19A LTR ERVK -478 259 1 2 827 1496 301 79 21 chrX 31754027 31754597 -134895699 + Lx8 LINE L1 6071 6673 -800 2 827 733 342 70 19 chrX 31754612 31755095 -134895201 + Lx8 LINE L1 6730 7237 -236 2 827 5737 186 40 50 chrX 31756274 31757606 -134892690 - L1_Mur3 LINE L1 -144 5736 4418 2 827 859 191 113 7 chrX 31757612 31757896 -134892400 - L1_Mur3 LINE L1 -2494 3386 3073 2 827 31791 93 21 4 chrX 31757914 31759381 -134890915 - L1_Mus2 LINE L1 -1 6568 5058 2 827 5814 99 6 0 chrX 31759381 31760179 -134890117 - L1_Mus1 LINE L1 0 6567 5765 2 827 31791 91 19 9 chrX 31760179 31764911 -134885385 - L1_Mus2 LINE L1 -829 5057 199 2 827 1442 122 19 19 chrX 31764913 31765173 -134885123 - L1_Mur1 LINE L1 -3319 2567 2308 2 827 1716 281 68 51 chrX 31765180 31765810 -134884486 - RLTR26 LTR ERVK 0 642 2 2 827 4566 190 65 8 chrX 31765816 31766654 -134883642 - L1VL4 LINE L1 -3585 2301 1411 2 827 2115 109 6 0 chrX 31766654 31766965 -134883331 - L1_Mus1 LINE L1 0 6567 6255 2 827 4566 218 54 4 chrX 31766965 31767488 -134882808 - L1VL4 LINE L1 -4476 1410 859 2 827 5575 164 11 91 chrX 31767925 31768845 -134881451 - L1_Mur2 LINE L1 -2107 3779 2866 2 827 1762 201 48 2 chrX 31768845 31769264 -134881032 + BGLII_A LTR ERVK 1 438 -7 2 827 5575 164 11 91 chrX 31769264 31769992 -134880304 - L1_Mur2 LINE L1 -2107 2865 2141 2 827 1409 112 23 19 chrX 31769970 31770226 -134880070 - L1_Mur2 LINE L1 -4137 1740 1484 2 827 2038 203 43 0 chrX 31770229 31770655 -134879641 - L1_Mur2 LINE L1 -6272 814 383 2 827 2653 227 31 56 chrX 31770681 31770889 -134879407 + RMER6D LTR ERVK 16 230 -490 2 827 2353 66 122 11 chrX 31770889 31771240 -134879056 + RLTR10 LTR ERVK 1 390 0 2 827 2653 227 31 56 chrX 31771240 31771326 -134878970 + RMER6D LTR ERVK 231 314 -406 2 827 1918 133 92 3 chrX 31771326 31771664 -134878632 - RLTR9A LTR ERVK 0 368 1 2 827 2653 227 31 56 chrX 31771664 31771722 -134878574 + RMER6D LTR ERVK 315 362 -358 2 827 225 0 0 0 chrX 31771722 31771747 -134878549 + (TGG)n Simple_repeat Simple_repeat 2 26 0 2 827 2653 227 31 56 chrX 31771747 31772111 -134878185 + RMER6D LTR ERVK 363 716 -4 2 827 231 296 77 58 chrX 31772404 31772508 -134877788 - L2b LINE L2 -40 3335 3230 2 827 219 348 69 62 chrX 31772716 31772992 -134877304 - L2b LINE L2 -346 3073 2796 2 827 23 33 0 0 chrX 31773036 31773066 -134877230 + AT_rich Low_complexity Low_complexity 1 30 0 2 827 1595 142 101 39 chrX 31773768 31774106 -134876190 - ORR1B2 LTR MaLR -8 359 1 2 827 559 227 35 0 chrX 31774895 31775036 -134875260 + B1_Mur1 SINE Alu 2 147 -2 2 827 3516 133 69 18 chrX 31775126 31775245 -134875051 - Lx LINE L1 0 6654 6536 2 827 204 40 0 0 chrX 31775245 31775270 -134875026 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 2 827 3516 133 69 18 chrX 31775270 31775762 -134874534 - Lx LINE L1 -119 6535 6014 2 827 1664 188 0 9 chrX 31775762 31776085 -134874211 - ORR1A3 LTR MaLR -6 320 1 2 827 9941 153 63 16 chrX 31776085 31777959 -134872337 - ORR1A3-int LTR MaLR 0 1963 1 2 827 2042 126 29 44 chrX 31777961 31778356 -134871940 - MT2B2 LTR ERVL -2 582 155 2 827 310 336 68 27 chrX 31778357 31778504 -134871792 - RMER15 LTR ERVL -1 574 422 2 827 1965 162 13 0 chrX 31778889 31779203 -134871093 - ORR1A3 LTR MaLR -8 318 1 2 827 551 296 26 68 chrX 31779271 31779463 -134870833 - MTE2b LTR MaLR -15 364 181 2 827 1520 231 87 12 chrX 31779466 31779812 -134870484 + ORR1D1 LTR MaLR 3 374 0 2 827 706 271 28 11 chrX 31779812 31779989 -134870307 - MTE2b LTR MaLR -195 184 5 2 827 508 322 62 55 chrX 31780119 31780375 -134869921 + MER106B DNA MER1_type 1 258 -801 2 827 238 378 0 0 chrX 31780584 31780658 -134869638 + MER106B DNA MER1_type 266 339 -720 2 827 427 266 138 57 chrX 31780723 31781106 -134869190 + MER106B DNA MER1_type 445 858 -201 2 827 1023 116 0 0 chrX 31781559 31781706 -134868590 - B1_Mus1 SINE Alu -1 147 1 2 827 402 74 0 0 chrX 31781782 31781836 -134868460 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 827 670 337 68 0 chrX 31781903 31782108 -134868188 - B4A SINE B4 -73 219 1 2 827 347 294 84 18 chrX 31782201 31782367 -134867929 - CYRA11_Mm Unknown Y-chromosome -225 392 216 2 827 785 190 114 6 chrX 31782221 31782396 -134867900 + URR1A DNA MER1_type 33 226 0 2 827 471 218 59 27 chrX 31782466 31782587 -134867709 + MTD LTR MaLR 282 405 -14 2 827 616 161 27 0 chrX 31782643 31782755 -134867541 + ORR1C2 LTR MaLR 1 115 -263 2 827 2083 90 64 72 chrX 31782759 31783118 -134867178 - RLTR10B2 LTR ERVK -9 356 1 2 827 1515 143 75 0 chrX 31783119 31783385 -134866911 + ORR1C2 LTR MaLR 95 380 -4 2 827 3030 119 12 37 chrX 31784306 31784793 -134865503 + MT2C_Mm LTR ERVL 1 475 0 2 827 189 94 0 0 chrX 31785183 31785215 -134865081 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 2 827 555 251 47 61 chrX 31785220 31785648 -134864648 + L1_Mur3 LINE L1 1006 1429 -4451 2 827 554 146 131 0 chrX 31785661 31785791 -134864505 + Lx5 LINE L1 6904 7050 0 2 827 183 42 0 0 chrX 31785859 31785883 -134864413 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 3 827 5252 108 13 54 chrX 31785900 31786796 -134863500 + RLTR13A3 LTR ERVK 119 978 0 3 827 983 136 7 0 chrX 31786826 31786973 -134863323 - B1_Mus1 SINE Alu 0 148 1 3 827 1987 226 28 46 chrX 31786975 31787688 -134862608 + L1_Mur3 LINE L1 1459 2158 -3722 2 827 6770 100 11 3 chrX 31787694 31788721 -134861575 + L1_Mus3 LINE L1 5604 6638 0 3 827 460 139 0 29 chrX 31788739 31788843 -134861453 + GA-rich Low_complexity Low_complexity 4 104 0 3 827 2565 239 45 68 chrX 31788844 31788998 -134861298 + L1_Mur3 LINE L1 3047 3187 -2693 2 827 956 148 21 52 chrX 31788998 31789190 -134861106 + B2_Mm2 SINE B2 2 187 -8 3 827 2565 239 45 68 chrX 31789190 31789611 -134860685 + L1_Mur3 LINE L1 3188 3620 -2260 2 827 6281 127 19 15 chrX 31789611 31790630 -134859666 - RLTR13D5 LTR ERVK 0 1023 1 3 827 2565 239 45 68 chrX 31790630 31790910 -134859386 + L1_Mur3 LINE L1 3621 3889 -1991 2 827 893 180 0 0 chrX 31790910 31791060 -134859236 - B1_Mur4 SINE Alu 0 150 1 3 827 2565 239 45 68 chrX 31791060 31791254 -134859042 + L1_Mur3 LINE L1 3890 4073 -1807 2 827 693 189 0 15 chrX 31791258 31791392 -134858904 + MT2B LTR ERVL 1 132 -469 3 827 762 122 0 0 chrX 31791447 31791562 -134858734 + ORR1A2 LTR MaLR 213 327 0 3 827 2406 77 0 0 chrX 31791924 31792264 -134858032 - L1_Mm LINE L1 -1354 4529 4190 3 827 5440 116 20 5 chrX 31792282 31793121 -134857175 + L1_Mus3 LINE L1 5787 6638 0 3 827 561 263 148 10 chrX 31793143 31793454 -134856842 + L1MD2 LINE L1 5638 5991 -368 3 827 23 33 0 0 chrX 31793712 31793742 -134856554 + AT_rich Low_complexity Low_complexity 1 30 0 3 827 35762 34 4 1 chrX 31795221 31800481 -134849815 - L1Md_T LINE L1 -2 6580 1301 3 827 1406 181 10 0 chrX 31800478 31800776 -134849520 - L1Md_F LINE L1 -6053 466 166 3 827 375 23 0 0 chrX 31801483 31801527 -134848769 + (TC)n Simple_repeat Simple_repeat 2 45 0 3 827 303 121 0 0 chrX 31801527 31801584 -134848712 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 827 791 279 66 52 chrX 31801845 31802190 -134848106 - MTEa LTR MaLR 0 379 13 3 827 21 0 0 0 chrX 31802230 31802251 -134848045 + AT_rich Low_complexity Low_complexity 1 21 0 3 827 957 156 0 0 chrX 31802251 31802392 -134847904 + B1_Mur4 SINE Alu 1 141 -9 3 827 1008 115 5 0 chrX 31802959 31803134 -134847162 - L1_Mus1 LINE L1 -710 5176 4992 3 827 4812 73 5 26 chrX 31803131 31803938 -134846358 + L1_Mus1 LINE L1 5154 5932 -635 3 827 4185 135 9 56 chrX 31803938 31804739 -134845557 + RMER17A LTR ERVK 1 749 -2 3 827 4768 74 11 5 chrX 31804739 31805378 -134844918 + L1_Mus1 LINE L1 5925 6567 0 3 827 189 0 0 0 chrX 31805407 31805428 -134844868 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 3 827 603 205 160 28 chrX 31805884 31806101 -134844195 - Lx4B LINE L1 -4 7054 6788 3 827 180 0 0 0 chrX 31806102 31806122 -134844174 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 3 827 4627 161 8 3 chrX 31806212 31807087 -134843209 + L1_Mur2 LINE L1 3947 4825 -1052 3 827 4706 100 39 12 chrX 31807081 31807857 -134842439 - L1_Mur2 LINE L1 -254 5623 4827 3 827 269 161 18 0 chrX 31808364 31808420 -134841876 - MERVL_2A-int LTR ERVL -3496 2265 2209 3 827 2031 206 77 2 chrX 31808457 31808899 -134841397 + MERVL_2A-int LTR ERVL 3130 3604 -2157 3 827 28186 101 31 10 chrX 31808899 31811411 -134838885 + L1Md_F2 LINE L1 951 3476 -2407 3 827 318 26 0 0 chrX 31811411 31811450 -134838846 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 3 827 28186 101 35 10 chrX 31811450 31812214 -134838082 + L1Md_F2 LINE L1 3477 4350 -1533 3 827 3329 26 15 0 chrX 31812214 31812604 -134837692 - MTA_Mm LTR MaLR 0 396 1 3 827 28186 102 36 8 chrX 31812604 31814555 -134835741 + L1Md_F2 LINE L1 4351 6317 -265 3 827 759 142 35 7 chrX 31814555 31814697 -134835599 + L1Md_F2 LINE L1 6410 6555 -12 3 827 545 274 66 123 chrX 31814923 31815400 -134834896 + L1VL1 LINE L1 27 395 -6027 3 827 492 225 50 14 chrX 31815406 31815584 -134834712 + L1Md_T LINE L1 527 820 -5799 3 827 24582 62 162 1 chrX 31815587 31819738 -134830558 + L1Md_T LINE L1 773 5589 -297 3 827 8328 39 0 0 chrX 31819738 31820731 -134829565 + L1Md_T LINE L1 5590 6582 -3 3 827 317 0 0 0 chrX 31820731 31820775 -134829521 + L1Md_T LINE L1 6537 6580 -2 3 827 21807 124 13 7 chrX 31820797 31825340 -134824956 + L1_Mus1 LINE L1 2001 6654 0 3 827 6549 114 13 2 chrX 31825349 31826804 -134823492 + L1_Mus2 LINE L1 5092 6565 -1 3 827 840 188 113 7 chrX 31826822 31827106 -134823190 + L1_Mur3 LINE L1 3073 3386 -2494 3 827 5122 190 40 48 chrX 31827112 31828442 -134821854 + L1_Mur3 LINE L1 4418 5736 -144 3 827 578 321 65 20 chrX 31829756 31830109 -134820187 - Lx8 LINE L1 -375 7098 6730 3 827 1312 303 79 21 chrX 31830124 31830694 -134819602 - Lx8 LINE L1 -800 6673 6071 3 827 740 277 6 44 chrX 31831042 31831401 -134818895 + RMER19A LTR ERVK 1 259 -478 3 827 288 0 0 0 chrX 31831609 31831641 -134818655 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 827 393 271 0 61 chrX 31831993 31832158 -134818138 + GA-rich Low_complexity Low_complexity 4 158 0 3 827 855 291 77 35 chrX 31834631 31834969 -134815327 - MTE2a LTR MaLR 0 379 28 3 827 476 284 60 7 chrX 31834971 31835120 -134815176 - MTE2a-int LTR MaLR 0 1580 1424 3 827 821 174 29 23 chrX 31835121 31835292 -134815004 - L1_Mur3 LINE L1 -1120 4760 4589 3 827 29 0 0 0 chrX 31837559 31837588 -134812708 + AT_rich Low_complexity Low_complexity 1 29 0 3 827 14338 137 11 8 chrX 31837617 31840713 -134809583 - L1_Mus3 LINE L1 0 6638 3531 3 827 966 165 10 13 chrX 31840695 31840888 -134809408 - L1_Mus3 LINE L1 -3724 2422 2228 3 827 614 303 25 21 chrX 31841328 31841611 -134808685 + RLTR15 LTR ERVK 3 286 -73 3 827 1635 232 40 0 chrX 31841672 31841999 -134808297 + ORR1B1 LTR MaLR 14 353 -41 3 827 474 186 0 183 chrX 31841999 31842163 -134808133 + B1_Mus2 SINE Alu 1 134 -13 3 827 231 197 14 27 chrX 31842170 31842243 -134808053 + (CAGAGA)n Simple_repeat Simple_repeat 4 75 0 3 827 351 44 0 0 chrX 31842243 31842288 -134808008 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 827 387 0 0 0 chrX 31842290 31842333 -134807963 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 827 393 109 0 0 chrX 31842902 31842966 -134807330 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 3 827 1194 176 88 93 chrX 31843058 31843609 -134806687 + RLTR6_Mm LTR ERV1 1 603 -51 3 827 32789 35 26 0 chrX 31843610 31847807 -134802489 + RLTR6-int LTR ERV1 1 4421 -3357 3 827 7332 37 1 0 chrX 31847802 31848647 -134801649 + RLTR6-int LTR ERV1 6933 7778 0 3 827 289 194 209 0 chrX 31848647 31848714 -134801582 + RLTR6_Mm LTR ERV1 1 81 -573 3 827 1916 135 254 29 chrX 31848754 31849203 -134801093 + RLTR6_Mm LTR ERV1 37 586 -68 3 827 488 234 114 21 chrX 31849201 31849341 -134800955 + ORR1D1 LTR MaLR 205 357 -17 3 827 315 93 164 18 chrX 31849610 31849665 -134800631 + RMER10B LTR ERVL 1 63 -335 3 827 320 212 83 66 chrX 31849877 31849998 -134800298 + RMER17C-int LTR ERVK 2972 3094 -144 3 827 1498 164 75 117 chrX 31850064 31850492 -134799804 - RMER17C LTR ERVK 0 410 1 3 828 1560 183 182 6 chrX 31850507 31850842 -134799454 + RMER10B LTR ERVL 5 398 0 3 828 348 309 49 38 chrX 31850849 31851034 -134799262 - HERVL40-int LTR ERVL -2043 3487 3301 3 828 947 157 17 6 chrX 31851107 31851280 -134799016 - URR1A DNA MER1_type 0 226 52 3 828 264 130 0 0 chrX 31851281 31851327 -134798969 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 828 22 35 0 0 chrX 31852364 31852393 -134797903 + AT_rich Low_complexity Low_complexity 1 29 0 3 828 856 189 13 20 chrX 31852628 31852779 -134797517 - B1_Mur4 SINE Alu 0 150 1 3 828 411 78 130 0 chrX 31853055 31853132 -134797164 + ORR1A2 LTR MaLR 1 87 -240 3 828 1816 113 250 0 chrX 31853134 31853462 -134796834 - ORR1A2-int LTR MaLR -535 1428 1019 3 828 282 342 51 0 chrX 31853467 31853584 -134796712 + ETnERV2-int LTR ERVK 7074 7196 -210 3 828 2962 190 38 33 chrX 31853857 31854435 -134795861 - ORR1A2-int LTR MaLR -936 1027 394 3 828 2923 69 14 109 chrX 31854435 31854686 -134795610 - MTB LTR MaLR 0 400 183 3 828 1163 89 0 0 chrX 31854686 31854832 -134795464 - B1_Mm SINE Alu 0 147 2 3 828 2923 69 14 109 chrX 31854832 31855021 -134795275 - MTB LTR MaLR -218 182 2 3 828 2962 181 18 20 chrX 31855021 31855409 -134794887 - ORR1A2-int LTR MaLR -1395 397 1 3 828 2295 128 25 0 chrX 31855409 31855728 -134794568 - ORR1A2 LTR MaLR 0 327 1 3 828 1683 131 11 0 chrX 31855728 31856003 -134794293 + ORR1A2-int LTR MaLR 1686 1963 0 3 828 2060 156 3 58 chrX 31856003 31856349 -134793947 + ORR1A2 LTR MaLR 1 327 0 3 828 2680 221 70 40 chrX 31856397 31856703 -134793593 - RMER6D LTR ERVK -31 689 366 3 828 300 91 0 0 chrX 31856703 31856747 -134793549 + (CCA)n Simple_repeat Simple_repeat 3 46 0 3 828 2680 221 70 40 chrX 31856747 31856804 -134793492 - RMER6D LTR ERVK -355 365 315 3 828 2103 146 70 6 chrX 31856804 31857148 -134793148 + RLTR9A LTR ERVK 1 366 -2 3 828 2680 221 70 40 chrX 31857148 31857437 -134792859 - RMER6D LTR ERVK -406 314 16 3 828 270 139 0 0 chrX 31857463 31857506 -134792790 + L1VL4 LINE L1 525 567 -6519 3 828 347 45 0 0 chrX 31857523 31857567 -134792729 + RLTR1 LTR ERV1 581 624 0 3 828 4032 138 203 2 chrX 31857567 31858667 -134791629 + L1_Mur2 LINE L1 410 1746 -4131 3 828 9282 130 31 18 chrX 31858638 31859361 -134790935 + L1_Mur2 LINE L1 2140 2850 -3027 3 828 2160 184 47 5 chrX 31859361 31859788 -134790508 - BGLII_A LTR ERVK 0 445 1 3 828 9282 130 31 18 chrX 31859788 31860674 -134789622 + L1_Mur2 LINE L1 2851 3769 -2108 3 828 3229 221 48 7 chrX 31861111 31861521 -134788775 + L1VL4 LINE L1 859 1414 -4463 3 828 2092 127 7 0 chrX 31861521 31861828 -134788468 + L1_Mus1 LINE L1 6259 6567 0 3 828 4091 182 48 12 chrX 31861828 31862686 -134787610 + L1VL4 LINE L1 1415 2304 -3582 3 828 1532 266 37 26 chrX 31862694 31863156 -134787140 + RLTR26 LTR ERVK 1 496 -146 3 828 4726 171 19 19 chrX 31863232 31863385 -134786911 + L1VL4 LINE L1 2298 2451 -3435 3 828 3130 81 5 2 chrX 31863385 31863780 -134786516 + MTA_Mm LTR MaLR 1 396 0 3 828 4726 171 19 19 chrX 31863780 31864598 -134785698 + L1VL4 LINE L1 2452 3269 -2617 3 828 4689 160 53 5 chrX 31864599 31865509 -134784787 + Lx4A LINE L1 4829 5875 -1183 3 828 2419 208 19 7 chrX 31865502 31865967 -134784329 + Lx4A LINE L1 6493 6963 -95 3 828 1116 23 0 0 chrX 31865967 31866095 -134784201 - RLTR6-int LTR ERV1 -7650 128 1 3 828 1957 129 252 32 chrX 31866096 31866561 -134783735 - RLTR6_Mm LTR ERV1 -51 603 37 3 828 259 238 200 38 chrX 31866563 31866668 -134783628 - RLTR6_Mm LTR ERV1 -532 122 1 3 828 486 83 0 0 chrX 31866760 31866832 -134783464 + (TTCC)n Simple_repeat Simple_repeat 3 74 0 3 828 387 0 0 0 chrX 31867401 31867444 -134782852 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 828 564 42 0 0 chrX 31867446 31867517 -134782779 + (GA)n Simple_repeat Simple_repeat 2 72 0 3 828 231 197 14 27 chrX 31867517 31867590 -134782706 + (TCTCTG)n Simple_repeat Simple_repeat 4 75 0 3 828 474 186 0 183 chrX 31867597 31867761 -134782535 - B1_Mus2 SINE Alu -13 134 1 3 828 1657 229 40 0 chrX 31867761 31868088 -134782208 - ORR1B1 LTR MaLR -41 353 14 3 828 625 303 25 21 chrX 31868149 31868432 -134781864 - RLTR15 LTR ERVK -73 286 3 3 828 979 158 10 13 chrX 31868872 31869065 -134781231 + L1_Mus3 LINE L1 2228 2422 -3724 3 828 14427 136 11 8 chrX 31869047 31872143 -134778153 + L1_Mus3 LINE L1 3531 6638 0 3 828 29 0 0 0 chrX 31872172 31872201 -134778095 + AT_rich Low_complexity Low_complexity 1 29 0 3 828 852 168 29 23 chrX 31874468 31874639 -134775657 + L1_Mur3 LINE L1 4589 4760 -1120 3 828 476 284 60 7 chrX 31874640 31874789 -134775507 + MTE2a-int LTR MaLR 1424 1580 0 3 828 855 291 77 35 chrX 31874791 31875129 -134775167 + MTE2a LTR MaLR 28 379 0 3 828 377 277 0 61 chrX 31877602 31877767 -134772529 + CT-rich Low_complexity Low_complexity 4 158 0 3 828 321 26 0 0 chrX 31878119 31878157 -134772139 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 828 739 265 26 31 chrX 31878361 31878724 -134771572 - RMER19C LTR ERVK -338 273 1 3 828 1467 305 79 21 chrX 31879072 31879642 -134770654 + Lx8 LINE L1 6071 6673 -800 4 828 700 342 70 23 chrX 31879657 31880142 -134770154 + Lx8 LINE L1 6730 7237 -236 4 828 5700 190 40 48 chrX 31881321 31882651 -134767645 - L1_Mur3 LINE L1 -144 5736 4418 4 828 922 184 113 7 chrX 31882657 31882941 -134767355 - L1_Mur3 LINE L1 -2494 3386 3073 4 828 6998 116 12 2 chrX 31882959 31884416 -134765880 - L1_Mus2 LINE L1 -1 6565 5092 4 828 23573 126 13 7 chrX 31884430 31888967 -134761329 - L1_Mus1 LINE L1 0 6570 2004 4 828 317 0 0 0 chrX 31888995 31889039 -134761257 - L1Md_T LINE L1 -2 6580 6537 4 828 25976 28 1 0 chrX 31889039 31892955 -134757341 - L1Md_T LINE L1 -3 6579 2661 4 828 4604 161 63 8 chrX 31892955 31894364 -134755932 - L1_Mus1 LINE L1 -1901 2016 527 4 828 545 274 66 123 chrX 31894370 31894847 -134755449 - L1VL1 LINE L1 -6027 395 27 4 828 674 144 33 46 chrX 31895047 31895200 -134755096 - L1Md_F2 LINE L1 -4 6580 6430 4 828 28226 102 35 10 chrX 31895212 31897181 -134753115 - L1Md_F2 LINE L1 -262 6320 4352 4 828 3291 31 15 0 chrX 31897181 31897571 -134752725 + MTA_Mm LTR MaLR 1 396 0 4 828 28226 101 34 13 chrX 31897571 31898335 -134751961 - L1Md_F2 LINE L1 -1532 4351 3489 4 828 285 51 0 0 chrX 31898335 31898374 -134751922 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 4 828 28226 101 31 13 chrX 31898374 31900888 -134749408 - L1Md_F2 LINE L1 -2395 3488 951 4 828 2045 204 77 2 chrX 31900888 31901330 -134748966 - MERVL_2A-int LTR ERVL -2157 3604 3130 4 828 269 161 18 0 chrX 31901367 31901423 -134748873 + MERVL_2A-int LTR ERVL 2209 2265 -3496 4 828 4774 96 37 14 chrX 31901930 31902705 -134747591 + L1_Mur2 LINE L1 4827 5619 -258 4 828 4620 163 9 2 chrX 31902701 31903575 -134746721 - L1_Mur2 LINE L1 -1051 4826 3947 4 828 1049 156 166 22 chrX 31903686 31903915 -134746381 + Lx5 LINE L1 6788 7049 -1 4 828 252 0 0 0 chrX 31904368 31904396 -134745900 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 4 828 7078 67 7 12 chrX 31904422 31905061 -134745235 - L1_Mus1 LINE L1 0 6567 5933 4 828 4360 125 125 26 chrX 31905061 31905868 -134744428 - RMER17D LTR ERVK -2 887 1 4 828 7078 78 4 32 chrX 31905868 31906681 -134743615 - L1_Mus1 LINE L1 -635 5932 5154 4 828 1026 92 13 0 chrX 31906678 31906831 -134743465 + L1_Mus1 LINE L1 4992 5146 -737 4 828 916 170 0 0 chrX 31907407 31907548 -134742748 - B1_Mur4 SINE Alu -9 141 1 4 828 21 0 0 0 chrX 31907548 31907569 -134742727 + AT_rich Low_complexity Low_complexity 1 21 0 4 828 806 285 48 50 chrX 31907609 31907958 -134742338 + MTEa LTR MaLR 13 379 0 4 828 189 0 0 0 chrX 31908137 31908158 -134742138 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 4 828 624 48 0 0 chrX 31908224 31908308 -134741988 + (CA)n Simple_repeat Simple_repeat 1 84 0 4 828 414 0 0 0 chrX 31908308 31908353 -134741943 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 828 22 0 0 0 chrX 31910519 31910541 -134739755 + AT_rich Low_complexity Low_complexity 1 22 0 4 828 549 269 148 10 chrX 31910798 31911109 -134739187 - L1MD2 LINE L1 -368 5991 5638 4 828 5588 110 17 5 chrX 31911127 31911969 -134738327 - L1_Mus3 LINE L1 0 6638 5787 4 828 2334 85 0 0 chrX 31911987 31912327 -134737969 + L1_Mm LINE L1 4190 4529 -1354 4 828 768 97 9 0 chrX 31912697 31912811 -134737485 - ORR1A2 LTR MaLR 0 327 213 4 828 718 174 0 15 chrX 31912866 31913000 -134737296 - MT2B LTR ERVL -469 132 1 4 828 2658 233 45 69 chrX 31913004 31913198 -134737098 - L1_Mur3 LINE L1 -1807 4073 3890 4 828 902 180 0 0 chrX 31913198 31913348 -134736948 + B1_Mur4 SINE Alu 1 150 0 4 828 2658 233 45 69 chrX 31913348 31913630 -134736666 - L1_Mur3 LINE L1 -1991 3889 3621 4 828 5942 144 20 15 chrX 31913630 31914648 -134735648 + RLTR13D5 LTR ERVK 1 1023 0 4 828 2658 233 45 69 chrX 31914648 31915069 -134735227 - L1_Mur3 LINE L1 -2260 3620 3188 4 828 890 159 21 62 chrX 31915069 31915263 -134735033 - B2_Mm2 SINE B2 -8 187 2 4 828 2658 233 45 69 chrX 31915263 31915416 -134734880 - L1_Mur3 LINE L1 -2693 3187 3047 4 828 469 152 9 9 chrX 31915417 31915523 -134734773 + CT-rich Low_complexity Low_complexity 3 108 0 4 828 6885 95 12 3 chrX 31915544 31916570 -134733726 - L1_Mus3 LINE L1 0 6638 5604 4 828 1998 228 28 46 chrX 31916576 31917289 -134733007 - L1_Mur3 LINE L1 -3722 2158 1459 4 828 990 129 7 0 chrX 31917291 31917438 -134732858 + B1_Mus1 SINE Alu 1 148 0 4 828 5328 104 15 55 chrX 31917470 31918382 -134731914 - RLTR13A3 LTR ERVK 0 978 1 4 828 234 0 0 0 chrX 31918383 31918409 -134731887 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 4 828 560 146 131 0 chrX 31918475 31918605 -134731691 - Lx5 LINE L1 0 7050 6904 4 828 519 260 42 101 chrX 31918618 31919186 -134731110 - L1_Mur3 LINE L1 -4451 1429 894 4 828 3037 119 12 37 chrX 31919463 31919950 -134730346 - MT2C_Mm LTR ERVL 0 475 1 4 828 1517 143 75 0 chrX 31920871 31921137 -134729159 - ORR1C2 LTR MaLR -4 380 95 4 828 2173 81 64 72 chrX 31921138 31921497 -134728799 + RLTR10B2 LTR ERVK 1 356 -9 4 828 581 170 27 0 chrX 31921501 31921613 -134728683 - ORR1C2 LTR MaLR -263 115 1 4 828 453 232 86 10 chrX 31921669 31921790 -134728506 - MTD LTR MaLR -14 405 282 4 828 790 192 198 0 chrX 31921861 31922048 -134728248 - URR1A DNA MER1_type 0 226 3 4 828 697 332 68 0 chrX 31922149 31922354 -134727942 + B4A SINE B4 1 219 -73 4 828 348 83 0 0 chrX 31922421 31922469 -134727827 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 828 1033 109 0 0 chrX 31922548 31922695 -134727601 + B1_Mus1 SINE Alu 1 147 -1 4 828 426 251 146 65 chrX 31923146 31923529 -134726767 - MER106B DNA MER1_type -201 858 445 4 828 468 267 59 29 chrX 31923870 31924040 -134726256 - MER106B DNA MER1_type -801 258 84 4 828 701 271 28 11 chrX 31924256 31924433 -134725863 + MTE2b LTR MaLR 5 184 -195 4 828 1552 227 84 11 chrX 31924433 31924780 -134725516 - ORR1D1 LTR MaLR 0 374 3 4 828 521 302 26 68 chrX 31924783 31924975 -134725321 + MTE2b LTR MaLR 181 364 -15 4 828 1942 162 13 0 chrX 31925043 31925357 -134724939 + ORR1A3 LTR MaLR 1 318 -8 4 828 343 326 68 27 chrX 31925742 31925890 -134724406 + RMER15 LTR ERVL 422 575 0 4 828 2108 117 29 45 chrX 31925890 31926285 -134724011 + MT2B2 LTR ERVL 155 582 -2 4 828 9600 156 63 14 chrX 31926287 31928159 -134722137 + ORR1A3-int LTR MaLR 1 1963 0 4 828 1702 194 0 9 chrX 31928159 31928487 -134721809 + ORR1A3 LTR MaLR 1 325 -1 4 828 3374 139 69 15 chrX 31928487 31928972 -134721324 + Lx LINE L1 6017 6518 -136 4 828 204 40 0 0 chrX 31928972 31928997 -134721299 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 4 828 3374 139 69 15 chrX 31928997 31929116 -134721180 + Lx LINE L1 6519 6653 -1 4 828 582 227 35 0 chrX 31929208 31929349 -134720947 - B1_Mur1 SINE Alu -2 147 2 4 828 1760 135 101 36 chrX 31930138 31930475 -134719821 + ORR1B2 LTR MaLR 1 359 -8 4 828 23 33 0 0 chrX 31931178 31931208 -134719088 + AT_rich Low_complexity Low_complexity 1 30 0 4 828 336 353 69 70 chrX 31931252 31931838 -134718458 + L2a LINE L2 2796 3383 -43 4 828 2919 222 42 53 chrX 31932094 31932459 -134717837 - RMER6D LTR ERVK 0 720 363 4 828 285 29 0 0 chrX 31932459 31932493 -134717803 + (CCA)n Simple_repeat Simple_repeat 2 35 0 4 828 2919 222 42 53 chrX 31932493 31932551 -134717745 - RMER6D LTR ERVK -358 362 315 4 828 1877 137 92 3 chrX 31932551 31932889 -134717407 + RLTR9A LTR ERVK 1 368 0 4 828 2919 222 42 53 chrX 31932889 31933177 -134717119 - RMER6D LTR ERVK -406 314 16 4 828 4076 135 199 5 chrX 31933203 31934315 -134715981 + L1_Mur2 LINE L1 383 1713 -4164 4 828 9115 126 12 21 chrX 31934320 31935044 -134715252 + L1_Mur2 LINE L1 2141 2850 -3027 4 828 1847 204 45 2 chrX 31935044 31935471 -134714825 - BGLII_A LTR ERVK 0 445 1 4 828 9115 126 12 21 chrX 31935471 31936391 -134713905 + L1_Mur2 LINE L1 2851 3770 -2107 4 828 4151 219 55 6 chrX 31936837 31937351 -134712945 + L1VL4 LINE L1 869 1410 -4476 4 828 2195 99 3 0 chrX 31937351 31937663 -134712633 + L1_Mus1 LINE L1 6255 6567 0 4 828 4151 190 69 11 chrX 31937663 31938504 -134711792 + L1VL4 LINE L1 1411 2304 -3582 4 828 2003 277 65 51 chrX 31938507 31939139 -134711157 + RLTR26 LTR ERVK 2 642 0 4 828 1330 133 15 15 chrX 31939146 31939406 -134710890 + Lx4A LINE L1 2308 2567 -3319 4 828 29961 81 1 3 chrX 31939408 31944711 -134705585 + L1Md_F2 LINE L1 199 5589 -297 4 828 7884 62 3 2 chrX 31944711 31945705 -134704591 + L1Md_F2 LINE L1 5590 6584 -1 4 828 288 77 0 0 chrX 31946128 31946167 -134704129 + (A)n Simple_repeat Simple_repeat 1 39 0 4 828 6280 233 122 65 chrX 31946168 31948296 -134702000 + Lx4A LINE L1 2558 4832 -1045 4 828 1340 107 0 5 chrX 31948296 31948484 -134701812 + B2_Mm2 SINE B2 1 187 -8 4 828 6280 233 122 65 chrX 31948484 31948562 -134701734 + Lx4A LINE L1 4833 4927 -950 4 828 369 0 0 0 chrX 31948562 31948603 -134701693 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 4 828 873 162 0 0 chrX 31948610 31948746 -134701550 - B1_Mus2 SINE Alu -7 140 5 4 828 6280 226 112 63 chrX 31948746 31949557 -134700739 + Lx4A LINE L1 4928 5875 -1183 4 828 2483 205 30 11 chrX 31949568 31950101 -134700195 + Lx4A LINE L1 6515 7057 -1 4 828 24 0 0 0 chrX 31950101 31950125 -134700171 + AT_rich Low_complexity Low_complexity 1 24 0 4 828 3905 211 42 13 chrX 31950750 31951620 -134698676 - RMER19B LTR ERVK -6 896 1 4 828 279 71 0 0 chrX 31954803 31954845 -134695451 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 4 828 202 175 40 30 chrX 31955694 31955794 -134694502 + (TA)n Simple_repeat Simple_repeat 2 102 0 4 828 6911 112 12 2 chrX 31956409 31957517 -134692779 - L1_Mus3 LINE L1 0 6638 5515 4 828 18538 153 22 21 chrX 31957535 31959867 -134690429 - L1_Mus3 LINE L1 -1270 4613 2285 4 828 2643 82 0 3 chrX 31959867 31960210 -134690086 + ORR1A1 LTR MaLR 1 342 -4 4 828 18538 153 22 21 chrX 31960210 31960412 -134689884 - L1_Mus3 LINE L1 -3599 2284 2071 4 828 180 0 0 0 chrX 31960412 31960432 -134689864 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 828 18538 165 27 22 chrX 31960432 31962138 -134688158 - L1_Mus3 LINE L1 -3813 2070 361 4 828 827 255 57 9 chrX 31962597 31962807 -134687489 + RLTR41 LTR ERV1 227 446 0 4 828 1273 204 39 4 chrX 31962861 31963141 -134687155 - ORR1B1-int LTR MaLR -895 614 325 4 828 2865 117 75 2 chrX 31963141 31963637 -134686659 - RLTR47_MM LTR ERV1 0 532 1 4 828 200 61 61 0 chrX 31963922 31963955 -134686341 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 4 828 1578 154 50 42 chrX 31964246 31964625 -134685671 + LTRIS4 LTR ERV1 124 505 -2 4 828 2223 148 27 22 chrX 31964750 31965157 -134685139 + RLTR9E LTR ERVK 1 409 0 4 828 718 234 20 80 chrX 31965166 31965486 -134684810 + MMETn-int LTR ERVK 10 372 -2942 4 828 333 100 0 20 chrX 31965481 31965532 -134684764 + ETnERV2-int LTR ERVK 2091 2140 -5104 4 828 290 111 0 0 chrX 31965982 31966027 -134684269 + RMER16-int LTR ERVK 144 188 -5218 4 828 288 250 59 50 chrX 31965997 31966098 -134684198 + RMER16-int LTR ERVK 718 819 -4587 4 828 643 165 26 9 chrX 31966102 31966218 -134684078 + RMER16-int LTR ERVK 1089 1206 -4200 4 828 507 247 58 52 chrX 31966235 31966389 -134683907 + ETnERV2-int LTR ERVK 2454 2608 -4798 4 828 22672 110 25 28 chrX 31966389 31967204 -134683092 + ETnERV2-int LTR ERVK 3055 3932 -3474 4 828 432 0 0 0 chrX 31967204 31967252 -134683044 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 828 22672 110 25 28 chrX 31967252 31969089 -134681207 + ETnERV2-int LTR ERVK 3933 5778 -1628 4 828 1168 101 77 11 chrX 31969089 31969248 -134681048 + B2_Mm1a SINE B2 1 160 -33 4 828 193 0 29 59 chrX 31969248 31969282 -134681014 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 4 828 1168 101 77 11 chrX 31969282 31969303 -134680993 + B2_Mm1a SINE B2 161 193 0 4 828 22672 110 25 28 chrX 31969303 31970025 -134680271 + ETnERV2-int LTR ERVK 5779 6421 -985 4 828 520 93 0 26 chrX 31970236 31970313 -134679983 + ETnERV2-int LTR ERVK 7331 7405 -1 4 828 2485 136 10 17 chrX 31970313 31970725 -134679571 + RLTR9E LTR ERVK 1 409 0 4 828 13963 103 63 10 chrX 31970815 31974243 -134676053 + MuRRS4-int LTR ERV1 180 3789 -1274 4 828 595 256 182 42 chrX 31974307 31974686 -134675610 + L1M2 LINE L1 4384 4815 -1328 4 828 544 167 0 16 chrX 31974705 31974827 -134675469 + (TA)n Simple_repeat Simple_repeat 2 121 0 4 828 2996 277 87 51 chrX 31974827 31975166 -134675130 + Lx8 LINE L1 6172 6509 -964 4 828 612 27 0 0 chrX 31975166 31975240 -134675056 + (TG)n Simple_repeat Simple_repeat 1 74 0 4 828 2996 277 87 51 chrX 31975240 31975792 -134674504 + Lx8 LINE L1 6510 7118 -355 4 828 1092 77 14 0 chrX 31975792 31975935 -134674361 + B1_Mus2 SINE Alu 1 145 -2 4 828 2996 277 87 51 chrX 31975935 31975970 -134674326 + Lx8 LINE L1 7119 7121 -352 4 828 537 16 0 0 chrX 31975970 31976032 -134674264 + (GAAA)n Simple_repeat Simple_repeat 2 63 0 4 828 2996 277 87 51 chrX 31976032 31976358 -134673938 + Lx8 LINE L1 7122 7470 -3 4 828 1126 271 56 28 chrX 31976477 31976837 -134673459 + ORR1D2 LTR MaLR 1 370 0 5 828 714 266 9 27 chrX 31976837 31977057 -134673239 + ORR1D2-int LTR MaLR 1 216 -1154 5 828 376 193 45 0 chrX 31977074 31977162 -134673134 - RMER17C LTR ERVK 0 410 319 5 828 498 205 101 45 chrX 31977161 31977191 -134673105 - RMER17C LTR ERVK -200 210 185 5 828 789 29 28 35 chrX 31977191 31977333 -134672963 + (GAGAA)n Simple_repeat Simple_repeat 5 145 0 5 828 498 205 101 45 chrX 31977333 31977501 -134672795 - RMER17C LTR ERVK -226 184 1 5 828 591 244 80 29 chrX 31977501 31977717 -134672579 + ORR1D2-int LTR MaLR 230 471 -1038 5 828 2107 145 67 6 chrX 31977717 31978063 -134672233 + ORR1B2 LTR MaLR 1 367 0 5 828 547 232 53 90 chrX 31978063 31978185 -134672111 + ORR1D2-int LTR MaLR 472 621 -749 5 828 18908 100 3 1 chrX 31978187 31981002 -134669294 - L1Md_A LINE L1 -1937 3946 1129 5 103 12145 97 1 22 chrX 31981000 31982756 -134667540 + L1_Mus4 LINE L1 3940 5658 -225 5 829 2178 109 227 44 chrX 31982865 31983346 -134666950 + RLTR6_Mm LTR ERV1 37 605 -49 5 829 68173 19 12 1 chrX 31983346 31991033 -134659263 + RLTR6-int LTR ERV1 1 7778 0 5 829 2077 111 236 43 chrX 31991142 31991604 -134658692 + RLTR6_Mm LTR ERV1 37 587 -67 5 829 941 42 10 0 chrX 31991604 31991728 -134658568 + L1_Mus4 LINE L1 5658 5815 -368 5 829 253 263 0 0 chrX 31991715 31991772 -134658524 - Lx9 LINE L1 -387 7257 7201 5 829 4565 142 10 25 chrX 31991805 31992750 -134657546 - L1Md_A LINE L1 -4460 1423 498 5 829 612 121 48 16 chrX 31992751 31992877 -134657419 + L1Md_F2 LINE L1 6450 6579 -3 5 829 929 297 52 34 chrX 31992880 31992919 -134657377 + Lx8 LINE L1 6140 6191 -1282 5 829 369 0 0 0 chrX 31992919 31992960 -134657336 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 829 929 297 52 34 chrX 31992960 31993328 -134656968 + Lx8 LINE L1 6192 6554 -919 5 829 1458 168 98 96 chrX 31993356 31993801 -134656495 + RMER16 LTR ERVK 1 533 0 5 829 229 279 73 0 chrX 31993801 31993869 -134656427 + Lx8 LINE L1 6594 6666 -807 5 829 1729 176 31 116 chrX 31993869 31994351 -134655945 - RMER10A LTR ERVL 0 442 2 5 829 1681 206 75 40 chrX 31994408 31994837 -134655459 - RLTR41 LTR ERV1 -2 444 1 5 829 718 270 66 31 chrX 31994839 31995095 -134655201 + Lx8 LINE L1 6724 6988 -485 5 829 244 274 0 0 chrX 31995096 31995160 -134655136 + B1_Mus1 SINE Alu 1 64 -85 5 829 781 309 44 121 chrX 31995158 31995813 -134654483 - RLTR18 LTR ERVK -9 607 3 5 829 295 230 138 0 chrX 31995818 31995905 -134654391 + B1_Mur2 SINE Alu 49 147 -2 5 829 1055 73 44 0 chrX 31995938 31996074 -134654222 + B1_Mm SINE Alu 3 144 -3 5 829 938 85 14 0 chrX 31996074 31996215 -134654081 + (GAAA)n Simple_repeat Simple_repeat 2 144 0 5 829 1204 302 63 48 chrX 31996217 31996669 -134653627 + Lx7 LINE L1 5699 6159 -1537 5 829 3116 100 22 39 chrX 31996669 31997159 -134653137 + RLTR45 LTR ERVK 1 482 0 5 829 1204 302 63 48 chrX 31997159 31997217 -134653079 + Lx7 LINE L1 6160 6208 -1488 5 829 1220 136 0 37 chrX 31997217 31997431 -134652865 - Lx2 LINE L1 0 6997 6792 5 829 1204 302 63 48 chrX 31997431 31997524 -134652772 + Lx7 LINE L1 6209 6312 -1384 5 829 858 92 14 0 chrX 31998136 31998278 -134652018 + Lx LINE L1 6511 6654 0 5 829 653 148 16 8 chrX 31998368 31998497 -134651799 + Lx4A LINE L1 6910 7039 -19 5 829 365 58 19 0 chrX 31998497 31998549 -134651747 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 5 829 584 178 16 41 chrX 31998630 31998753 -134651543 + PB1D9 SINE Alu 1 120 0 5 829 689 156 78 0 chrX 31998949 31999077 -134651219 - B1_Mur2 SINE Alu 0 149 12 5 829 266 313 43 51 chrX 31998954 31999092 -134651204 - B4A SINE B4 -73 219 83 5 829 1244 151 28 28 chrX 31999118 31999329 -134650967 - Lx9 LINE L1 -624 7020 6810 5 829 424 186 22 55 chrX 31999328 31999419 -134650877 + Lx9 LINE L1 7130 7217 -427 5 829 2368 151 56 12 chrX 31999421 31999850 -134650446 - RLTR11B LTR ERVK -3 450 3 5 829 627 161 208 0 chrX 31999851 32000000 -134650296 + Lx9 LINE L1 7309 7488 -156 5 829 446 255 25 0 chrX 32000000 32000157 -134650139 + Lx9 LINE L1 7483 7643 -1 1 829 301 335 38 31 chrX 32000205 32000365 -134649931 + Lx9 LINE L1 7266 7426 -218 2 829 445 302 26 53 chrX 32000653 32000842 -134649454 + RLTR23 LTR ERV1 247 430 0 3 829 302 291 8 106 chrX 32000871 32000994 -134649302 - RSINE1 SINE B4 0 165 55 4 829 3499 3 0 0 chrX 32001445 32001811 -134648485 + L1Md_A LINE L1 6217 6582 0 5 829 1193 83 7 0 chrX 32001841 32001986 -134648310 + B1_Mus2 SINE Alu 2 147 0 6 829 229 221 159 14 chrX 32002005 32002074 -134648222 + PB1 SINE Alu 21 99 -28 7 829 2450 108 23 76 chrX 32002018 32002451 -134647845 + MT2B LTR ERVL 192 601 0 8 829 1085 227 140 48 chrX 32002451 32002714 -134647582 - ORR1B2 LTR MaLR -75 292 1 9 829 243 0 0 0 chrX 32002800 32002827 -134647469 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 829 1070 110 0 20 chrX 32002838 32002986 -134647310 - B1_Mus2 SINE Alu -2 145 1 1 829 3014 97 9 16 chrX 32003231 32003661 -134646635 + L1Md_F2 LINE L1 6156 6582 0 1 829 2813 125 55 38 chrX 32004206 32004680 -134645616 - RLTR45 LTR ERVK 0 482 1 1 829 3946 218 52 15 chrX 32007997 32008849 -134641447 + RMER19B LTR ERVK 1 883 -19 1 829 25 0 0 0 chrX 32009469 32009494 -134640802 + AT_rich Low_complexity Low_complexity 1 25 0 1 829 2872 210 31 7 chrX 32009494 32010045 -134640251 - Lx4A LINE L1 -2 7056 6493 1 829 11079 179 234 9 chrX 32010045 32010904 -134639392 - Lx4A LINE L1 -1190 5868 4252 1 829 1278 133 0 5 chrX 32010904 32011093 -134639203 - B2_Mm2 SINE B2 -7 188 1 1 829 11079 176 242 9 chrX 32011093 32012886 -134637410 - Lx4A LINE L1 -1626 4251 2443 1 829 3022 94 5 2 chrX 32012886 32013281 -134637015 - MTA_Mm LTR MaLR 0 396 1 1 829 11079 176 242 9 chrX 32013281 32013432 -134636864 - Lx4A LINE L1 -3435 2442 2295 1 829 2078 276 65 52 chrX 32013435 32014069 -134636227 - RLTR26 LTR ERVK 0 642 1 1 829 4180 182 43 12 chrX 32014071 32014923 -134635373 - Lx4A LINE L1 -3582 2304 1426 1 829 2194 117 3 0 chrX 32014931 32015239 -134635057 - L1_Mus1 LINE L1 0 6567 6259 2 829 1622 229 44 8 chrX 32015239 32015710 -134634586 - L1VL4 LINE L1 -5346 989 522 2 829 2023 130 35 0 chrX 32016103 32016450 -134633846 - L1_Mur2 LINE L1 -2140 3737 3379 2 829 3760 62 90 37 chrX 32016450 32017038 -134633258 - RLTR6_Mm LTR ERV1 -35 619 1 2 829 24270 31 26 14 chrX 32017038 32019930 -134630366 - MMVL30-int LTR ERV1 0 3698 772 2 829 414 287 0 59 chrX 32020278 32020430 -134629866 - MMVL30-int LTR ERV1 -7023 533 391 2 829 6540 29 46 17 chrX 32020425 32021230 -134629066 - RLTR6-int LTR ERV1 -6950 828 1 2 829 3939 60 87 36 chrX 32021231 32021839 -134628457 - RLTR6_Mm LTR ERV1 -15 639 1 2 829 6902 136 30 25 chrX 32021840 32022350 -134627946 - L1_Mur2 LINE L1 -2496 3381 2878 2 829 2118 186 47 5 chrX 32022350 32022777 -134627519 + BGLII_A LTR ERVK 1 445 0 2 829 6902 136 30 25 chrX 32022777 32023502 -134626794 - L1_Mur2 LINE L1 -3000 2877 2142 2 829 2135 106 286 1 chrX 32023473 32024124 -134626172 - L1_Mur2 LINE L1 -4131 1746 878 2 829 3784 66 30 2 chrX 32024124 32024593 -134625703 + RLTR45 LTR ERVK 1 482 0 2 829 4383 78 107 16 chrX 32024593 32025227 -134625069 + RLTR45-int LTR ERVK 1 692 -6552 2 829 1132 65 0 0 chrX 32025525 32025663 -134624633 + RLTR45-int LTR ERVK 681 818 -6426 2 829 12229 38 47 3 chrX 32026459 32028264 -134622032 + RLTR45-int LTR ERVK 1329 3212 -4032 2 829 3931 100 28 28 chrX 32028234 32028841 -134621455 + RLTR45-int LTR ERVK 3380 3986 -3258 2 829 8372 47 1 8 chrX 32028834 32029849 -134620447 + RLTR45-int LTR ERVK 5065 6072 -1172 2 829 2052 91 13 3 chrX 32029871 32030170 -134620126 + RLTR13B1 LTR ERVK 207 508 -385 2 829 7766 49 1 3 chrX 32030170 32031084 -134619212 + RLTR45-int LTR ERVK 6333 7244 0 2 829 3822 64 32 2 chrX 32031084 32031552 -134618744 + RLTR45 LTR ERVK 1 482 0 2 829 2083 198 44 2 chrX 32031552 32032007 -134618289 - L1_Mur2 LINE L1 -6203 883 410 2 829 347 45 0 0 chrX 32032007 32032051 -134618245 - RLTR1 LTR ERV1 0 624 581 2 829 275 116 0 0 chrX 32032068 32032111 -134618185 - L1_Mur2 LINE L1 -6519 193 151 3 829 2982 214 44 36 chrX 32032137 32032424 -134617872 + RMER6D LTR ERVK 16 314 -406 3 829 2015 150 79 6 chrX 32032424 32032767 -134617529 - RLTR9A LTR ERVK 0 368 1 3 829 2982 214 44 36 chrX 32032767 32032824 -134617472 + RMER6D LTR ERVK 315 363 -357 3 829 300 91 0 0 chrX 32032824 32032868 -134617428 + (TGG)n Simple_repeat Simple_repeat 3 46 0 3 829 2982 214 44 36 chrX 32032868 32033221 -134617075 + RMER6D LTR ERVK 364 720 0 3 829 340 364 54 57 chrX 32033494 32034123 -134616173 - L2a LINE L2 -40 3386 2791 3 829 2157 144 3 58 chrX 32034340 32034686 -134615610 - ORR1A2 LTR MaLR 0 327 1 3 829 1711 124 11 0 chrX 32034686 32034961 -134615335 - ORR1A2-int LTR MaLR 0 1963 1686 3 829 2317 125 25 0 chrX 32034961 32035280 -134615016 + ORR1A2 LTR MaLR 1 327 0 3 829 4158 183 80 18 chrX 32035280 32035669 -134614627 + ORR1A2-int LTR MaLR 1 385 -1578 3 829 2993 76 5 87 chrX 32035669 32035861 -134614435 + MTB LTR MaLR 2 182 -218 3 829 1182 75 0 0 chrX 32035861 32036007 -134614289 + B1_Mm SINE Alu 2 147 0 3 829 2993 76 5 87 chrX 32036007 32036249 -134614047 + MTB LTR MaLR 183 400 0 3 829 4158 183 80 18 chrX 32036249 32036826 -134613470 + ORR1A2-int LTR MaLR 386 1027 -936 3 829 1867 107 250 0 chrX 32037221 32037549 -134612747 + ORR1A2-int LTR MaLR 1019 1428 -535 3 829 411 78 130 0 chrX 32037551 32037628 -134612668 - ORR1A2 LTR MaLR -240 87 1 3 829 844 186 7 7 chrX 32037904 32038050 -134612246 + B1_Mus2 SINE Alu 1 146 -1 4 829 215 31 31 0 chrX 32038292 32038324 -134611972 + (TAA)n Simple_repeat Simple_repeat 2 34 0 4 829 1271 170 8 43 chrX 32039308 32039365 -134610931 + URR1A DNA MER1_type 1 51 -175 4 829 357 24 0 0 chrX 32039365 32039407 -134610889 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 829 1271 170 8 43 chrX 32039407 32039583 -134610713 + URR1A DNA MER1_type 52 226 0 4 829 305 322 48 37 chrX 32039656 32039843 -134610453 + HERVL40-int LTR ERVL 3301 3489 -2041 4 829 1577 180 181 9 chrX 32039848 32040184 -134610112 - RMER10B LTR ERVL 0 398 5 4 829 1528 159 75 117 chrX 32040199 32040627 -134609669 + RMER17C LTR ERVK 1 410 0 4 829 342 231 50 33 chrX 32040693 32040814 -134609482 - RMER17C-int LTR ERVK -144 3094 2972 4 829 312 93 164 18 chrX 32041026 32041081 -134609215 - RMER10B LTR ERVL -335 63 1 4 829 533 290 53 16 chrX 32041349 32041538 -134608758 - ORR1D2 LTR MaLR -17 353 158 4 829 562 189 121 25 chrX 32041551 32041772 -134608524 - ORR1D2-int LTR MaLR -17 1563 1216 4 829 965 261 17 102 chrX 32041794 32041931 -134608365 - Lx7 LINE L1 -21 7675 7551 5 829 1218 56 7 0 chrX 32041931 32042073 -134608223 + B1_Mm SINE Alu 5 147 0 5 829 965 261 17 102 chrX 32042073 32042417 -134607879 - Lx7 LINE L1 -146 7550 7235 5 829 461 158 198 0 chrX 32042459 32042560 -134607736 + ORR1B2 LTR MaLR 1 121 -246 5 829 496 268 65 58 chrX 32042726 32043003 -134607293 - L1M4 LINE L1 -395 5789 5511 5 829 283 314 11 44 chrX 32043028 32043118 -134607178 + MLT1-int LTR MaLR 939 1025 -346 5 829 525 275 0 8 chrX 32043143 32043264 -134607032 + B1F SINE Alu 29 148 -1 5 829 418 192 240 39 chrX 32043545 32043673 -134606623 - Lx9 LINE L1 -7 7637 7475 5 829 276 30 0 0 chrX 32043673 32043706 -134606590 + (TA)n Simple_repeat Simple_repeat 1 33 0 5 829 418 192 240 39 chrX 32043706 32043756 -134606540 - Lx9 LINE L1 -170 7474 7424 5 829 250 333 36 0 chrX 32043833 32043917 -134606379 - RLTR19-int LTR ERVK -1662 4475 4389 5 829 252 0 0 0 chrX 32044156 32044184 -134606112 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 5 829 32470 83 10 48 chrX 32044236 32050707 -134599589 - L1Md_F2 LINE L1 0 6585 278 6 829 248 254 0 48 chrX 32051558 32051620 -134598676 - ID4 SINE ID -23 60 2 6 829 7579 58 10 0 chrX 32051995 32052879 -134597417 + RLTR13B1 LTR ERVK 1 893 0 6 829 487 365 28 24 chrX 32052976 32053189 -134597107 - MER76 LTR ERVL -477 214 1 6 829 1853 159 16 86 chrX 32053534 32053906 -134596390 + ORR1B1 LTR MaLR 41 386 -8 6 829 733 303 74 74 chrX 32053961 32054257 -134596039 + MT2A LTR ERVL 173 468 -65 6 829 360 147 46 7 chrX 32054261 32054420 -134595876 + (TA)n Simple_repeat Simple_repeat 1 165 0 6 829 982 183 168 0 chrX 32054442 32054633 -134595663 + URR1B DNA MER1_type 1 223 -2 6 829 31139 93 19 5 chrX 32054633 32060894 -134589402 + L1Md_F2 LINE L1 238 6570 -12 6 829 1353 102 0 5 chrX 32060996 32061184 -134589112 - B2_Mm2 SINE B2 -8 187 1 6 829 721 257 9 8 chrX 32061338 32061511 -134588785 - RMER16 LTR ERVK -274 259 1 7 829 422 147 0 0 chrX 32061511 32061586 -134588710 - RMER16-int LTR ERVK -2 5404 5330 7 829 6323 141 36 30 chrX 32061693 32062879 -134587417 - RMER16-int LTR ERVK -103 5303 4111 7 829 19599 108 40 47 chrX 32063355 32066349 -134583947 - RMER16-int LTR ERVK -1534 3872 931 7 829 4727 60 3 0 chrX 32066349 32066934 -134583362 + LTRIS_Mus LTR ERV1 1 587 0 7 829 19599 108 40 47 chrX 32066934 32067156 -134583140 - RMER16-int LTR ERVK -4476 930 706 7 829 732 23 0 0 chrX 32067156 32067242 -134583054 + (TC)n Simple_repeat Simple_repeat 2 87 0 7 829 19599 108 40 47 chrX 32067242 32067509 -134582787 - RMER16-int LTR ERVK -4701 705 415 7 829 595 140 0 0 chrX 32067509 32067602 -134582694 + RMER19B LTR ERVK 798 890 -12 7 829 1538 252 64 13 chrX 32067612 32068063 -134582233 + Lx8 LINE L1 6566 7039 -434 7 829 299 172 0 17 chrX 32068063 32068122 -134582174 + LTRIS_Mus LTR ERV1 264 321 -266 7 829 293 191 16 16 chrX 32068131 32068195 -134582101 + Lx8 LINE L1 7095 7158 -315 7 829 227 31 31 0 chrX 32068328 32068360 -134581936 + (TA)n Simple_repeat Simple_repeat 2 34 0 7 829 459 0 0 0 chrX 32068361 32068412 -134581884 + (GA)n Simple_repeat Simple_repeat 1 51 0 7 829 354 251 140 25 chrX 32068537 32068737 -134581559 + L1M2 LINE L1 3039 3261 -2882 7 829 897 293 67 56 chrX 32069550 32069941 -134580355 - LTR55 LTR ERV -149 399 5 7 829 649 304 17 62 chrX 32070851 32071139 -134579157 + LTR55 LTR ERV 4 278 -270 8 829 239 258 32 0 chrX 32071228 32071290 -134579006 + ID_B1 SINE B4 161 224 0 8 829 672 158 174 41 chrX 32071347 32071519 -134578777 - B2_Mm2 SINE B2 0 195 1 8 829 6618 100 9 12 chrX 32071717 32073273 -134577023 + L1_Mus2 LINE L1 5016 6565 -1 8 829 198 103 0 0 chrX 32073447 32073476 -134576820 + (T)n Simple_repeat Simple_repeat 1 29 0 8 829 1233 48 0 0 chrX 32073476 32073623 -134576673 - B1_Mus2 SINE Alu 0 147 1 8 829 1250 199 36 68 chrX 32073843 32074124 -134576172 + ORR1C1 LTR MaLR 3 274 -104 8 829 2632 59 0 6 chrX 32074113 32074452 -134575844 - IAPLTR4 LTR ERVK -8 337 1 8 829 5643 196 3 7 chrX 32074452 32075508 -134574788 - IAPLTR3-int LTR ERVK -20 6801 5750 8 829 583 261 35 46 chrX 32075860 32076121 -134574175 - IAPLTR3-int LTR ERVK -819 5723 5466 8 829 855 210 73 12 chrX 32076357 32076685 -134573611 - ETnERV3-int LTR ERVK -974 5507 5068 8 829 711 124 28 28 chrX 32076796 32076937 -134573359 - ETnERV3-int LTR ERVK -2911 4670 4530 8 829 515 178 9 0 chrX 32076963 32077070 -134573226 - MMETn-int LTR ERVK -2380 2464 2357 8 829 6048 121 54 6 chrX 32077075 32078438 -134571858 - ETnERV3-int LTR ERVK -3135 4271 2735 8 829 288 259 0 66 chrX 32078451 32078542 -134571754 - ETnERV3-int LTR ERVK -4868 2538 2454 8 829 432 183 92 0 chrX 32078553 32078673 -134571623 - ETnERV3-int LTR ERVK -5557 1849 1719 8 829 1146 206 124 37 chrX 32078719 32079154 -134571142 - ETnERV3-int LTR ERVK -4783 623 255 8 829 294 148 178 22 chrX 32079275 32079365 -134570931 - IAPLTR3-int LTR ERVK -6629 952 849 9 829 437 50 26 124 chrX 32079378 32079491 -134570805 - IAPLTR3-int LTR ERVK -5886 935 834 9 829 443 188 9 38 chrX 32079491 32079596 -134570700 - IAPLTR3-int LTR ERVK -6704 117 16 9 829 2608 65 0 6 chrX 32079603 32079942 -134570354 - IAPLTR4 LTR ERVK -8 337 1 9 829 650 218 0 0 chrX 32079943 32080067 -134570229 + ORR1C1 LTR MaLR 255 378 0 8 829 2016 173 8 3 chrX 32080267 32080644 -134569652 + RLTR14 LTR ERV1 2 380 -2 9 829 1182 227 18 54 chrX 32080646 32080981 -134569315 + RLTR14-int LTR ERV1 1 323 -4994 9 829 325 213 0 0 chrX 32081216 32081277 -134569019 - ORR1A4 LTR MaLR -8 321 261 9 829 1022 215 4 83 chrX 32081273 32081527 -134568769 - ORR1A4-int LTR MaLR -192 1771 1538 9 829 6924 81 2 5 chrX 32081527 32082772 -134567524 - L1Md_F2 LINE L1 -5 6577 5337 9 829 10753 98 12 1 chrX 32082768 32085084 -134565212 - L1Md_F LINE L1 -3006 2877 536 9 829 4751 160 20 6 chrX 32085084 32085919 -134564377 - ORR1A4-int LTR MaLR -405 1558 712 9 829 4227 164 32 44 chrX 32085917 32086200 -134564096 - ORR1A4-int LTR MaLR -1137 826 568 9 829 180 0 0 0 chrX 32086200 32086220 -134564076 + (CAA)n Simple_repeat Simple_repeat 2 21 0 9 829 4227 164 32 44 chrX 32086220 32086772 -134563524 - ORR1A4-int LTR MaLR -1396 567 2 9 829 279 214 0 0 chrX 32086772 32086828 -134563468 - ORR1A4 LTR MaLR 0 329 274 9 829 1929 86 25 11 chrX 32088634 32088917 -134561379 - ORR1A4 LTR MaLR -42 287 1 9 829 1182 196 185 22 chrX 32088917 32089216 -134561080 - RLTR33 LTR ERVK -152 526 177 9 829 660 171 0 2 chrX 32089358 32089484 -134560812 + ORR1B2 LTR MaLR 1 113 -233 9 829 3873 132 98 142 chrX 32089637 32090585 -134559711 - RMER17A2 LTR ERVK 0 906 1 9 829 635 25 12 0 chrX 32095011 32095092 -134555204 + (CA)n Simple_repeat Simple_repeat 2 83 0 1 829 1977 134 0 0 chrX 32098337 32098635 -134551661 + L1_Mus4 LINE L1 6330 6627 -9 1 829 5341 93 8 5 chrX 32107415 32108217 -134542079 - L1_Mm LINE L1 -264 5619 4816 1 829 2312 91 17 6 chrX 32108218 32108571 -134541725 + L1Md_F2 LINE L1 5230 5586 -297 1 829 7319 80 4 6 chrX 32108571 32109557 -134540739 + L1Md_F2 LINE L1 5587 6570 -12 1 103 15856 155 7 41 chrX 32109557 32114773 -134535523 + L1_Mus3 LINE L1 1637 6631 -7 1 830 424 339 40 35 chrX 32115311 32115485 -134534811 - MTEa LTR MaLR 0 379 205 1 830 380 263 0 0 chrX 32115538 32115614 -134534682 + RSINE1 SINE B4 5 80 -85 1 830 265 195 115 115 chrX 32115688 32115775 -134534521 - MTEa LTR MaLR -226 133 47 1 830 1938 118 261 29 chrX 32116178 32116623 -134533673 - RLTR6_Mm LTR ERV1 -70 584 37 1 830 240 238 200 38 chrX 32116625 32116730 -134533566 - RLTR6_Mm LTR ERV1 -532 122 1 1 830 2824 42 0 3 chrX 32116750 32117088 -134533208 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 830 6951 28 2 7 chrX 32117088 32117950 -134532346 - IAPEz-int LTR ERVK 0 6481 5624 1 830 20577 38 40 14 chrX 32117934 32120609 -134529687 - IAPEz-int LTR ERVK -3729 2752 8 1 830 2824 42 0 3 chrX 32120609 32120947 -134529349 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 830 525 88 0 0 chrX 32121025 32121105 -134529191 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 1 830 279 0 0 0 chrX 32121674 32121705 -134528591 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 830 405 39 0 0 chrX 32121707 32121758 -134528538 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 830 231 197 14 27 chrX 32121758 32121831 -134528465 + (TCTCTG)n Simple_repeat Simple_repeat 4 75 0 1 830 489 219 0 165 chrX 32121838 32122002 -134528294 - B1_Mur4 SINE Alu -13 137 1 1 830 1658 229 40 0 chrX 32122002 32122329 -134527967 - ORR1B1 LTR MaLR -41 353 14 1 830 664 300 25 21 chrX 32122390 32122673 -134527623 - RLTR15 LTR ERVK -73 286 3 1 830 924 104 0 7 chrX 32123149 32123294 -134527002 + L1_Mus3 LINE L1 2241 2384 -3499 1 830 13321 137 10 8 chrX 32123288 32126382 -134523914 + L1_Mus3 LINE L1 3531 6632 -6 1 830 29 0 0 0 chrX 32126417 32126446 -134523850 + AT_rich Low_complexity Low_complexity 1 29 0 1 830 770 168 29 23 chrX 32128712 32128883 -134521413 + L1_Mur3 LINE L1 4589 4760 -1120 1 830 483 284 60 7 chrX 32128884 32129033 -134521263 + MTE2a-int LTR MaLR 1424 1580 0 1 830 937 288 65 24 chrX 32129035 32129373 -134520923 + MTE2a LTR MaLR 28 379 0 1 830 368 277 0 61 chrX 32131846 32132011 -134518285 + CT-rich Low_complexity Low_complexity 4 158 0 1 830 724 282 6 44 chrX 32132585 32132944 -134517352 - RMER19A LTR ERVK -478 259 1 1 830 1244 312 75 21 chrX 32133292 32133864 -134516432 + Lx8 LINE L1 6071 6673 -800 1 830 555 350 77 25 chrX 32133879 32134362 -134515934 + Lx8 LINE L1 6730 7237 -236 1 830 5034 194 40 50 chrX 32135541 32136873 -134513423 - L1_Mur3 LINE L1 -144 5736 4418 1 830 829 187 112 7 chrX 32136879 32137164 -134513132 - L1_Mur3 LINE L1 -2494 3386 3072 1 830 17272 124 109 10 chrX 32137181 32141300 -134508996 - L1_Mus2 LINE L1 -1 6565 2001 1 830 279 104 0 0 chrX 32141300 32141348 -134508948 + (T)n Simple_repeat Simple_repeat 1 48 0 1 830 323 0 0 0 chrX 32141350 32141396 -134508900 - L1Md_T LINE L1 0 6582 6537 1 830 26973 64 130 2 chrX 32141396 32146701 -134503595 - L1Md_T LINE L1 -2 6583 548 1 830 599 283 73 108 chrX 32146719 32147200 -134503096 - L1VL1 LINE L1 -6027 395 4 1 830 729 116 33 46 chrX 32147400 32147553 -134502743 - L1Md_F2 LINE L1 -4 6580 6430 1 830 28453 102 34 6 chrX 32147565 32149517 -134500779 - L1Md_F2 LINE L1 -262 6320 4352 1 830 3302 28 15 0 chrX 32149517 32149907 -134500389 + MTA_Mm LTR MaLR 1 396 0 1 830 28453 101 33 8 chrX 32149907 32150675 -134499621 - L1Md_F2 LINE L1 -1532 4351 3489 1 830 279 0 0 0 chrX 32150675 32150706 -134499590 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 1 830 28453 101 30 8 chrX 32150706 32153218 -134497078 - L1Md_F2 LINE L1 -2395 3488 951 1 830 2018 209 77 2 chrX 32153218 32153660 -134496636 - MERVL_2A-int LTR ERVL -2157 3604 3130 1 830 269 161 18 0 chrX 32153697 32153753 -134496543 + MERVL_2A-int LTR ERVL 2209 2265 -3496 1 830 4750 101 36 9 chrX 32154260 32155032 -134495264 + L1_Mur2 LINE L1 4827 5619 -258 1 830 4679 157 13 2 chrX 32155028 32155899 -134494397 - L1_Mur2 LINE L1 -1051 4826 3947 1 830 989 170 166 22 chrX 32156010 32156239 -134494057 + Lx5 LINE L1 6788 7049 -1 1 830 252 0 0 0 chrX 32156692 32156720 -134493576 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 1 830 7009 68 7 12 chrX 32156746 32157385 -134492911 - L1_Mus1 LINE L1 0 6567 5933 1 830 4257 134 123 20 chrX 32157385 32158189 -134492107 - RMER17D LTR ERVK -2 887 1 1 830 7009 81 4 32 chrX 32158189 32159002 -134491294 - L1_Mus1 LINE L1 -635 5932 5154 1 830 1035 85 13 0 chrX 32158999 32159152 -134491144 + L1_Mus1 LINE L1 4992 5146 -737 1 830 205 288 0 0 chrX 32159507 32159566 -134490730 + T-rich Low_complexity Low_complexity 1 59 0 1 830 929 163 0 0 chrX 32159729 32159870 -134490426 - B1_Mur4 SINE Alu -9 141 1 1 830 21 0 0 0 chrX 32159870 32159891 -134490405 + AT_rich Low_complexity Low_complexity 1 21 0 1 830 745 286 69 55 chrX 32159931 32160276 -134490020 + MTEa LTR MaLR 13 379 0 1 830 711 69 0 0 chrX 32160537 32160639 -134489657 + (CA)n Simple_repeat Simple_repeat 1 102 0 1 830 288 0 0 0 chrX 32160639 32160670 -134489626 + (GA)n Simple_repeat Simple_repeat 2 33 0 1 830 22 0 0 0 chrX 32162836 32162858 -134487438 + AT_rich Low_complexity Low_complexity 1 22 0 1 830 549 269 148 10 chrX 32163116 32163427 -134486869 - L1MD2 LINE L1 -368 5991 5638 1 830 5579 111 17 5 chrX 32163445 32164287 -134486009 - L1_Mus3 LINE L1 0 6638 5787 1 830 2271 94 0 0 chrX 32164305 32164645 -134485651 + L1_Mm LINE L1 4190 4529 -1354 1 830 762 122 0 0 chrX 32165015 32165130 -134485166 - ORR1A2 LTR MaLR 0 327 213 1 830 670 197 0 15 chrX 32165185 32165319 -134484977 - MT2B LTR ERVL -469 132 1 1 830 2644 230 44 74 chrX 32165323 32165517 -134484779 - L1_Mur3 LINE L1 -1807 4073 3892 1 830 906 168 0 0 chrX 32165517 32165660 -134484636 + B1_Mur4 SINE Alu 1 143 -7 1 830 2644 230 44 74 chrX 32165660 32165947 -134484349 - L1_Mur3 LINE L1 -1989 3891 3621 1 830 6074 137 20 15 chrX 32165947 32166965 -134483331 + RLTR13D5 LTR ERVK 1 1023 0 1 830 2644 230 44 74 chrX 32166965 32167386 -134482910 - L1_Mur3 LINE L1 -2260 3620 3188 1 830 981 143 21 52 chrX 32167386 32167578 -134482718 - B2_Mm2 SINE B2 -8 187 2 1 830 1202 255 49 50 chrX 32167578 32167731 -134482565 - L1_Mur3 LINE L1 -2693 3187 3047 1 830 421 167 10 10 chrX 32167732 32167835 -134482461 + CT-rich Low_complexity Low_complexity 2 104 0 1 830 6805 100 12 3 chrX 32167857 32168883 -134481413 - L1_Mus3 LINE L1 0 6638 5604 1 830 1933 232 26 50 chrX 32168889 32169606 -134480690 - L1_Mur3 LINE L1 -3722 2158 1459 1 830 1022 116 7 0 chrX 32169608 32169755 -134480541 + B1_Mus1 SINE Alu 1 148 0 1 830 5280 103 14 54 chrX 32169781 32170676 -134479620 - RLTR13A3 LTR ERVK 0 978 119 1 830 216 0 0 0 chrX 32170693 32170717 -134479579 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 830 558 146 131 0 chrX 32170785 32170915 -134479381 - Lx5 LINE L1 0 7050 6904 1 830 515 260 50 56 chrX 32170928 32171347 -134478949 - L1_Mur3 LINE L1 -4451 1429 1012 1 830 2935 130 12 37 chrX 32171771 32172258 -134478038 - MT2C_Mm LTR ERVL 0 475 1 1 830 243 232 119 41 chrX 32173025 32173176 -134477120 - ORR1B2 LTR MaLR -122 262 75 1 830 2150 87 64 72 chrX 32173176 32173535 -134476761 + RLTR10B2 LTR ERVK 1 356 -9 1 830 591 170 27 0 chrX 32173539 32173651 -134476645 - ORR1C1 LTR MaLR -263 115 1 1 830 471 218 59 27 chrX 32173707 32173828 -134476468 - MTD LTR MaLR -14 405 282 1 830 790 192 198 0 chrX 32173899 32174086 -134476210 - URR1A DNA MER1_type 0 226 3 1 830 679 337 68 0 chrX 32174187 32174392 -134475904 + B4A SINE B4 1 219 -73 1 830 258 136 0 0 chrX 32174459 32174503 -134475793 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 830 981 129 0 0 chrX 32174579 32174726 -134475570 + B1_Mus1 SINE Alu 1 147 -1 1 830 26 0 0 0 chrX 32175150 32175176 -134475120 + AT_rich Low_complexity Low_complexity 1 26 0 1 830 421 254 143 65 chrX 32175178 32175562 -134474734 - MER106B DNA MER1_type -201 858 445 1 830 247 350 106 0 chrX 32175578 32175701 -134474595 - MER106B DNA MER1_type -658 401 266 1 830 504 245 71 41 chrX 32175903 32176073 -134474223 - MER106B DNA MER1_type -801 258 84 1 830 680 282 28 11 chrX 32176289 32176466 -134473830 + MTE2b LTR MaLR 5 184 -195 1 830 1553 225 87 12 chrX 32176466 32176812 -134473484 - ORR1D1 LTR MaLR 0 374 3 1 830 527 302 26 68 chrX 32176815 32177007 -134473289 + MTE2b LTR MaLR 181 364 -15 1 830 1935 162 13 0 chrX 32177075 32177389 -134472907 + ORR1A3 LTR MaLR 1 318 -8 1 830 344 324 61 20 chrX 32177774 32177922 -134472374 + RMER15 LTR ERVL 422 575 0 1 830 2078 125 29 45 chrX 32177922 32178317 -134471979 + MT2B2 LTR ERVL 155 582 -2 1 830 9760 152 62 16 chrX 32178319 32180194 -134470102 + ORR1A3-int LTR MaLR 1 1963 0 1 830 1653 188 19 9 chrX 32180194 32180516 -134469780 + ORR1A3 LTR MaLR 1 325 -1 1 830 3571 134 41 27 chrX 32180516 32181145 -134469151 + Lx LINE L1 6017 6654 0 1 830 566 234 35 0 chrX 32181240 32181381 -134468915 - B1_Mur1 SINE Alu -2 147 2 1 830 1751 138 101 36 chrX 32182170 32182507 -134467789 + ORR1B2 LTR MaLR 1 359 -8 1 830 23 33 0 0 chrX 32183211 32183241 -134467055 + AT_rich Low_complexity Low_complexity 1 30 0 1 830 324 362 67 68 chrX 32183285 32183871 -134466425 + L2a LINE L2 2796 3383 -43 1 830 3059 214 38 53 chrX 32184162 32184530 -134465766 - RMER6D LTR ERVK 0 720 363 1 830 387 0 0 0 chrX 32184530 32184573 -134465723 + (CCA)n Simple_repeat Simple_repeat 2 44 0 1 830 3059 214 38 53 chrX 32184573 32184631 -134465665 - RMER6D LTR ERVK -358 362 315 1 830 1845 142 92 3 chrX 32184631 32184969 -134465327 + RLTR9A LTR ERVK 1 368 0 1 830 3059 214 38 53 chrX 32184969 32185257 -134465039 - RMER6D LTR ERVK -406 314 16 1 830 3980 138 200 8 chrX 32185283 32186398 -134463898 + L1_Mur2 LINE L1 383 1713 -4164 1 830 9161 123 11 21 chrX 32186403 32187126 -134463170 + L1_Mur2 LINE L1 2141 2850 -3027 1 830 1842 207 45 2 chrX 32187126 32187553 -134462743 - BGLII_A LTR ERVK 0 445 1 1 830 9161 123 11 21 chrX 32187553 32188475 -134461821 + L1_Mur2 LINE L1 2851 3770 -2107 1 830 4264 214 52 4 chrX 32188921 32189435 -134460861 + L1VL4 LINE L1 869 1410 -4476 1 830 2234 93 3 0 chrX 32189435 32189747 -134460549 + L1_Mus1 LINE L1 6255 6567 0 1 830 4264 190 61 8 chrX 32189747 32190592 -134459704 + L1VL4 LINE L1 1411 2304 -3582 1 830 2031 266 68 54 chrX 32190595 32191227 -134459069 + RLTR26 LTR ERVK 2 642 0 1 830 1378 118 19 19 chrX 32191234 32191494 -134458802 + L1_Mur2 LINE L1 2308 2567 -3319 1 830 30529 81 2 4 chrX 32191498 32196799 -134453497 + L1Md_F2 LINE L1 201 5589 -297 1 830 7831 60 4 2 chrX 32196799 32197793 -134452503 + L1Md_F2 LINE L1 5590 6585 0 1 830 258 32 0 0 chrX 32198214 32198245 -134452051 + (A)n Simple_repeat Simple_repeat 1 31 0 1 830 5299 233 122 64 chrX 32198246 32200378 -134449918 + L1_Mur2 LINE L1 2558 4832 -1045 1 830 1341 102 0 5 chrX 32200378 32200566 -134449730 + B2_Mm2 SINE B2 1 187 -8 1 830 5299 233 122 64 chrX 32200566 32200643 -134449653 + L1_Mur2 LINE L1 4833 4926 -951 1 830 234 0 0 0 chrX 32200643 32200669 -134449627 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1 830 976 137 0 0 chrX 32200673 32200812 -134449484 - B1_Mus2 SINE Alu -4 143 5 1 830 5299 237 115 61 chrX 32200812 32201624 -134448672 + L1_Mur2 LINE L1 4927 5792 -388 1 830 2570 199 30 15 chrX 32201632 32202167 -134448129 + Lx4A LINE L1 6515 7057 -1 1 830 24 0 0 0 chrX 32202167 32202191 -134448105 + AT_rich Low_complexity Low_complexity 1 24 0 1 830 4172 219 42 13 chrX 32202810 32203686 -134446610 - RMER19B LTR ERVK 0 902 1 2 831 469 385 40 17 chrX 32305483 32305829 -134344467 + RMER1C Other Other 521 874 -468 2 831 289 393 32 35 chrX 32306758 32307074 -134343222 + RMER1C Other Other 550 864 -478 2 831 296 383 46 10 chrX 32307436 32307631 -134342665 + RMER1C Other Other 462 663 -679 2 831 228 405 19 19 chrX 32308451 32308612 -134341684 + RMER1C Other Other 646 806 -536 2 831 326 401 26 19 chrX 32309705 32309969 -134340327 + RMER1C Other Other 464 729 -613 2 831 21 0 0 0 chrX 32310073 32310094 -134340202 + AT_rich Low_complexity Low_complexity 1 21 0 2 831 295 424 43 10 chrX 32310185 32310485 -134339811 + RMER1C Other Other 510 819 -523 2 831 308 393 47 29 chrX 32310593 32311199 -134339097 + RMER1C Other Other 374 884 -458 2 831 9712 184 31 12 chrX 32311464 32314454 -134335842 - Lx4A LINE L1 -279 6779 3725 2 831 3204 173 48 9 chrX 32314466 32315399 -134334897 + Lx3C LINE L1 5353 6316 -660 2 831 1467 195 16 3 chrX 32315401 32315715 -134334581 - Lx2 LINE L1 -857 6140 5823 2 831 25694 125 9 38 chrX 32315728 32321435 -134328861 - L1_Mus1 LINE L1 0 6567 1071 2 831 1903 206 23 0 chrX 32321432 32321902 -134328394 - L1_Mus1 LINE L1 -5411 1205 725 2 831 464 259 21 7 chrX 32321899 32322043 -134328253 - L1_Mus1 LINE L1 -5801 815 670 2 831 455 295 15 116 chrX 32322098 32322556 -134327740 - L1VL1 LINE L1 -6030 392 48 2 831 742 177 69 16 chrX 32322593 32322782 -134327514 - L1_Mm LINE L1 -433 5450 5252 2 831 809 283 10 0 chrX 32322925 32323130 -134327166 + B3 SINE B2 1 207 -9 2 831 345 47 0 0 chrX 32323214 32323257 -134327039 + (TTCC)n Simple_repeat Simple_repeat 4 46 0 2 831 653 297 29 68 chrX 32323325 32323531 -134326765 - B3A SINE B2 0 198 1 2 831 603 265 49 35 chrX 32323833 32324118 -134326178 + Lx7 LINE L1 5857 6145 -1551 2 831 1736 266 52 22 chrX 32324144 32324721 -134325575 + Lx7 LINE L1 6061 6654 -1042 2 831 512 124 0 0 chrX 32324984 32325073 -134325223 + RMER3D-int LTR ERVK 488 564 -2278 2 831 583 218 25 40 chrX 32325088 32325289 -134325007 + RMER3D-int LTR ERVK 652 849 -1993 2 831 474 211 52 39 chrX 32325375 32325528 -134324768 + RMER3D-int LTR ERVK 650 804 -2038 2 831 435 165 13 0 chrX 32325588 32325667 -134324629 + RMER3D-int LTR ERVK 489 568 -2274 2 831 435 180 5 68 chrX 32325680 32325871 -134324425 + GA-rich Low_complexity Low_complexity 2 180 0 2 831 2232 185 88 83 chrX 32325918 32326239 -134324057 + RMER3D-int LTR ERVK 1016 1383 -1459 2 831 3244 48 2 0 chrX 32326239 32326634 -134323662 - MTA_Mm LTR MaLR 0 396 1 2 831 2232 185 88 83 chrX 32326634 32326984 -134323312 + RMER3D-int LTR ERVK 1384 1690 -1152 2 831 2568 221 45 51 chrX 32326990 32327911 -134322385 + RMER3D-int LTR ERVK 1927 2841 -1 2 831 2865 96 7 2 chrX 32327912 32328331 -134321965 + BGLII LTR ERVK 1 421 0 2 831 1290 212 74 50 chrX 32328570 32329001 -134321295 - RLTR21 LTR ERVK -150 1254 706 2 831 11509 80 5 1 chrX 32329002 32331340 -134318956 - L1Md_F2 LINE L1 -12 6570 4225 2 831 7421 143 86 2 chrX 32331322 32332314 -134317982 - L1Md_F2 LINE L1 -2717 3169 1960 2 831 238 67 44 0 chrX 32332314 32332359 -134317937 + (TTG)n Simple_repeat Simple_repeat 2 48 0 2 831 7713 127 11 16 chrX 32332359 32333890 -134316406 - L1Md_F2 LINE L1 -3924 1959 446 2 831 740 165 22 49 chrX 32333901 32334086 -134316210 - RLTR21 LTR ERVK -846 726 547 2 831 1379 220 18 39 chrX 32334132 32334463 -134315833 - RLTR21 LTR ERVK -1248 324 1 2 831 243 316 0 17 chrX 32334855 32334971 -134315325 - Lx6 LINE L1 -15 7445 7332 2 831 1740 257 20 28 chrX 32334971 32335205 -134315091 - Lx6 LINE L1 -1326 6134 5904 2 831 2034 198 17 14 chrX 32335205 32335625 -134314671 - MTC LTR MaLR 0 421 1 2 831 1740 257 20 28 chrX 32335625 32335899 -134314397 - Lx6 LINE L1 -1557 5903 5630 2 831 1188 192 28 3 chrX 32335928 32336210 -134314086 - L1_Mur3 LINE L1 -2593 3287 2999 2 831 3617 153 20 24 chrX 32336211 32336742 -134313554 - L1_Mus3 LINE L1 -8 6630 6101 2 831 2650 82 0 3 chrX 32336742 32337085 -134313211 - ORR1A1 LTR MaLR -4 342 1 2 831 3617 153 20 24 chrX 32337085 32337209 -134313087 - L1_Mus3 LINE L1 -538 6100 5978 2 831 2294 66 36 3 chrX 32337209 32337513 -134312783 + L1Md_F2 LINE L1 5273 5586 -297 2 831 7423 74 5 10 chrX 32337514 32338512 -134311784 + L1Md_F2 LINE L1 5588 6580 -2 2 831 1320 311 35 39 chrX 32338524 32339065 -134311231 - RodERV21-int LTR ERV1 -3339 1652 1114 2 831 336 269 58 65 chrX 32339204 32339343 -134310953 - RodERV21-int LTR ERV1 -3961 1030 893 2 831 226 297 13 13 chrX 32340382 32340457 -134309839 + GA-rich Low_complexity Low_complexity 3 77 0 2 831 431 245 27 40 chrX 32340608 32340757 -134309539 - L1_Rod LINE L1 -313 5534 5388 2 831 2076 205 67 31 chrX 32340768 32341322 -134308974 + RLTR31A_Mm LTR ERVK 11 584 0 2 831 233 219 104 9 chrX 32341322 32341428 -134308868 - L1_Rod LINE L1 -475 5372 5257 2 831 778 149 7 47 chrX 32341573 32341721 -134308575 - B1_Mus1 SINE Alu 0 148 7 2 831 3684 313 42 48 chrX 32342169 32342460 -134307836 - RodERV21-int LTR ERV1 -198 4793 4501 2 831 2440 126 35 54 chrX 32342460 32342888 -134307408 - RLTR9B2 LTR ERVK 0 420 1 2 831 3684 313 42 48 chrX 32342888 32344496 -134305800 - RodERV21-int LTR ERV1 -491 4500 2905 2 831 3378 74 20 14 chrX 32344611 32345104 -134305192 + LTRIS2 LTR ERV1 69 564 0 2 831 730 117 52 10 chrX 32345253 32345424 -134304872 + RLTR1B-int LTR ERV1 63 293 -3006 2 831 957 126 90 17 chrX 32345768 32345946 -134304350 + RMER16-int LTR ERVK 141 331 -5075 2 831 4119 152 52 18 chrX 32345932 32346637 -134303659 + RMER16-int LTR ERVK 690 1418 -3988 2 831 2657 201 110 45 chrX 32346641 32347540 -134302756 + RLTR1B-int LTR ERV1 835 1797 -3266 2 831 183 42 0 0 chrX 32347540 32347564 -134302732 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 831 5243 88 152 88 chrX 32347564 32348806 -134301490 + RLTR1B-int LTR ERV1 1260 2555 -744 2 831 1126 153 58 5 chrX 32348793 32349054 -134301242 + RLTR1B-int LTR ERV1 2669 2813 -486 2 831 1089 167 54 25 chrX 32349280 32349520 -134300776 + RLTR1B-int LTR ERV1 4791 5037 -26 2 831 3499 60 20 12 chrX 32349520 32350012 -134300284 + LTRIS2 LTR ERV1 69 564 0 2 831 1163 273 3 7 chrX 32350486 32350796 -134299500 - MuRRS4-int LTR ERV1 -118 4945 4637 2 831 751 196 0 7 chrX 32350796 32350945 -134299351 - MuRRS4-int LTR ERV1 -128 4935 4788 2 831 5304 154 59 33 chrX 32350936 32353243 -134297053 - MuRRS4-int LTR ERV1 -792 4271 1104 2 831 1482 272 33 7 chrX 32353265 32353687 -134296609 - MuRRS4-int LTR ERV1 -3619 1444 1012 2 831 729 266 16 78 chrX 32353836 32354093 -134296203 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 2 831 627 145 92 17 chrX 32354093 32354212 -134296084 - MuRRS4-int LTR ERV1 -4186 877 750 2 831 333 172 80 34 chrX 32354196 32354314 -134295982 - RMER16-int LTR ERVK -3958 1448 1386 2 831 4349 129 23 7 chrX 32354401 32355086 -134295210 - RMER16-int LTR ERVK -4045 1361 666 2 831 1251 233 66 22 chrX 32355115 32355435 -134294861 - MuRRS4-int LTR ERV1 -4388 675 342 2 831 697 244 51 77 chrX 32355770 32356321 -134293975 - MuRRS4-int LTR ERV1 -4565 498 5 2 831 567 228 101 34 chrX 32356323 32356532 -134293764 - LTRIS4 LTR ERV1 0 507 285 2 831 341 22 22 0 chrX 32357197 32357243 -134293053 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 831 481 347 27 42 chrX 32357402 32357880 -134292416 - RodERV21-int LTR ERV1 -3035 4056 3586 2 831 1355 275 16 51 chrX 32358005 32358435 -134291861 - RodERV21-int LTR ERV1 -2273 2718 2304 2 831 4542 107 24 0 chrX 32358440 32359104 -134291192 - L1_Mus3 LINE L1 -247 6391 5712 2 831 1531 137 0 0 chrX 32359106 32359332 -134290964 + L1_Mus3 LINE L1 5473 5698 -185 2 831 1563 190 12 21 chrX 32359332 32359660 -134290636 - RLTR14 LTR ERV1 -51 331 7 2 831 8806 190 104 25 chrX 32359685 32361649 -134288647 - RLTR14-int LTR ERV1 -5 5312 3195 2 831 1115 170 189 50 chrX 32361649 32362008 -134288288 + RLTR9E LTR ERVK 1 409 0 2 831 715 218 11 59 chrX 32362010 32362274 -134288022 + ETnERV2-int LTR ERVK 2 317 -2997 2 831 346 146 0 18 chrX 32362329 32362385 -134287911 + ETnERV2-int LTR ERVK 1074 1128 -6278 2 831 290 167 0 0 chrX 32362820 32362874 -134287422 + RMER16-int LTR ERVK 141 194 -5212 2 831 573 15 0 0 chrX 32362877 32362943 -134287353 + (TTC)n Simple_repeat Simple_repeat 2 67 0 2 831 1885 181 64 12 chrX 32362950 32363369 -134286927 + ETnERV2-int LTR ERVK 1648 2088 -5318 2 831 2865 175 38 30 chrX 32363390 32364044 -134286252 + ETnERV2-int LTR ERVK 1934 3135 -4271 2 831 7767 71 1 9 chrX 32364045 32365110 -134285186 - L1Md_F2 LINE L1 -14 6568 5513 2 831 843 142 6 105 chrX 32365110 32365291 -134285005 + ETnERV2-int LTR ERVK 2028 2190 -2654 2 831 3818 131 47 3 chrX 32365516 32366137 -134284159 + ETnERV2-int LTR ERVK 3441 4088 -3318 2 831 812 224 148 10 chrX 32366123 32366433 -134283863 + ETnERV2-int LTR ERVK 4597 4949 -2295 2 831 34022 88 4 21 chrX 32366459 32372830 -134277466 - L1Md_F2 LINE L1 -12 6570 315 2 831 7082 89 1 7 chrX 32372831 32373773 -134276523 - L1Md_F LINE L1 -5494 1025 90 2 831 372 177 271 0 chrX 32373832 32373928 -134276368 + MMETn-int LTR ERVK 2473 2554 -2290 2 831 4885 58 0 7 chrX 32373928 32374537 -134275759 + L1Md_F2 LINE L1 5966 6570 -12 2 831 372 200 0 87 chrX 32374537 32374568 -134275728 + MMETn-int LTR ERVK 2555 2577 -2267 2 831 276 102 0 0 chrX 32374569 32374618 -134275678 + (A)n Simple_repeat Simple_repeat 1 49 0 2 103 3189 180 13 40 chrX 32374618 32375537 -134274759 + MMETn-int LTR ERVK 2541 3719 -1125 2 832 742 211 0 0 chrX 32375532 32375655 -134274641 + MMETn-int LTR ERVK 6539 6661 -745 2 832 3446 206 44 17 chrX 32375686 32376431 -134273865 - RLTR14-int LTR ERV1 -2117 3200 2436 2 832 1664 242 53 121 chrX 32377874 32378665 -134271631 + RLTR40 LTR ERVK 22 752 -65 2 832 6365 94 24 5 chrX 32378665 32379541 -134270755 - RLTR13B1 LTR ERVK 0 893 1 2 832 1664 242 53 121 chrX 32379541 32379603 -134270693 + RLTR40 LTR ERVK 753 817 0 2 832 252 0 0 0 chrX 32379812 32379840 -134270456 + (GAA)n Simple_repeat Simple_repeat 2 29 0 2 832 1284 27 0 0 chrX 32380213 32380360 -134269936 + B1_Mus2 SINE Alu 1 147 0 2 832 207 0 0 0 chrX 32380360 32380383 -134269913 + (A)n Simple_repeat Simple_repeat 1 23 0 2 832 694 239 58 11 chrX 32381570 32381760 -134268536 - Lx9 LINE L1 -243 7401 7203 2 832 408 209 0 0 chrX 32381760 32381851 -134268445 + Lx9 LINE L1 7552 7642 -2 2 832 543 287 13 0 chrX 32381855 32382005 -134268291 + Lx5 LINE L1 6825 6976 -74 2 832 459 0 0 0 chrX 32382013 32382064 -134268232 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 2 832 651 208 34 14 chrX 32382079 32382225 -134268071 + B1_Mur3 SINE Alu 1 149 0 2 832 252 0 0 0 chrX 32382225 32382253 -134268043 + (A)n Simple_repeat Simple_repeat 1 28 0 2 832 1950 156 45 0 chrX 32382265 32382618 -134267678 + L1_Mus3 LINE L1 6262 6630 -8 2 832 26 50 0 0 chrX 32382630 32382670 -134267626 + AT_rich Low_complexity Low_complexity 1 40 0 2 832 227 263 0 0 chrX 32382736 32382793 -134267503 + A-rich Low_complexity Low_complexity 4 60 0 2 832 783 256 19 14 chrX 32382802 32383016 -134267280 + Lx4B LINE L1 6809 7023 -35 2 832 2944 175 37 2 chrX 32383052 32383641 -134266655 - L1_Mur2 LINE L1 -1176 4701 4092 2 832 9356 141 39 26 chrX 32383641 32385017 -134265279 - RLTR22_Mur LTR ERVK 0 1848 461 2 832 724 72 0 18 chrX 32385017 32385131 -134265165 + (TAG)n Simple_repeat Simple_repeat 3 114 0 2 832 9356 141 39 26 chrX 32385131 32385578 -134264718 - RLTR22_Mur LTR ERVK -1388 460 3 2 832 1279 196 17 14 chrX 32385578 32385868 -134264428 - L1_Mur2 LINE L1 -1782 4095 3805 2 832 1337 142 29 4 chrX 32385910 32386150 -134264146 + L1_Mus4 LINE L1 6391 6636 0 2 832 9318 20 0 0 chrX 32386182 32387240 -134263056 + L1Md_T LINE L1 4529 5586 -297 2 832 8107 58 0 0 chrX 32387240 32388236 -134262060 + L1Md_T LINE L1 5587 6582 0 2 832 225 0 0 0 chrX 32388604 32388629 -134261667 + (CAAAG)n Simple_repeat Simple_repeat 3 27 0 2 832 24 0 0 0 chrX 32390020 32390044 -134260252 + AT_rich Low_complexity Low_complexity 1 24 0 2 832 268 284 22 7 chrX 32390328 32390463 -134259833 + L1_Mur2 LINE L1 4334 4470 -1407 2 832 718 331 43 26 chrX 32390468 32390902 -134259394 + Lx6 LINE L1 6506 7296 -164 2 832 1426 196 20 82 chrX 32390879 32391329 -134258967 - L1_Mur2 LINE L1 -2136 3741 3320 2 832 1160 109 17 0 chrX 32391331 32391506 -134258790 - L1_Mus1 LINE L1 0 6567 6390 2 832 20701 124 7 3 chrX 32391507 32394478 -134255818 - L1_Mus1 LINE L1 -449 6118 3134 2 832 210 37 0 0 chrX 32394478 32394505 -134255791 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 832 20701 135 8 3 chrX 32394505 32395342 -134254954 - L1_Mus1 LINE L1 -2750 3133 2295 2 832 1280 183 52 0 chrX 32395343 32395594 -134254702 + L1VL1 LINE L1 3 266 -6156 2 832 27481 107 17 51 chrX 32395592 32399025 -134251271 + L1Md_F2 LINE L1 273 3463 -2420 2 832 1136 90 73 0 chrX 32399025 32399203 -134251093 + B2_Mm2 SINE B2 5 195 0 2 832 27481 86 7 64 chrX 32399203 32401322 -134248974 + L1Md_F2 LINE L1 3464 5585 -298 2 832 7636 70 1 0 chrX 32401323 32402306 -134247990 + L1Md_F2 LINE L1 5587 6570 -12 2 832 3572 82 13 0 chrX 32402307 32403134 -134247162 + L1Md_Gf LINE L1 828 1762 -4124 2 832 812 120 35 21 chrX 32403138 32403283 -134247013 - L1_Mus1 LINE L1 0 6567 6421 2 832 39199 8 0 1 chrX 32403454 32410237 -134240059 - L1Md_A LINE L1 0 6582 1 2 832 305 307 56 70 chrX 32410391 32410675 -134239621 - RMER17C LTR ERVK -48 362 83 2 832 5129 126 78 32 chrX 32411116 32412043 -134238253 + Lx3A LINE L1 6006 6974 -7 2 832 205 364 30 23 chrX 32413381 32413513 -134236783 + L2 LINE L2 1518 1650 -1769 3 832 549 338 39 7 chrX 32413784 32413939 -134236357 - B4A SINE B4 -2 290 131 3 832 207 114 0 0 chrX 32414037 32414072 -134236224 + (TGG)n Simple_repeat Simple_repeat 1 35 0 3 832 331 341 111 34 chrX 32414168 32414402 -134235894 + L2 LINE L2 2049 2300 -1119 3 832 4630 132 11 18 chrX 32414407 32415204 -134235092 + YREP_Mm Unknown Unknown 986 1777 -35 3 832 456 289 0 0 chrX 32416044 32416148 -134234148 + B3 SINE B2 98 201 -15 3 832 352 269 75 8 chrX 32416208 32416328 -134233968 + B1F SINE Alu 21 148 -1 3 832 966 227 19 0 chrX 32416474 32416681 -134233615 + B3 SINE B2 1 211 -5 3 832 658 319 97 34 chrX 32416914 32417183 -134233113 + B4A SINE B4 4 289 -3 3 832 22 56 0 0 chrX 32417192 32417228 -134233068 + AT_rich Low_complexity Low_complexity 1 36 0 3 832 15821 176 33 62 chrX 32417321 32420017 -134230279 + L1VL2 LINE L1 300 2807 -3076 3 832 955 119 0 0 chrX 32420017 32420151 -134230145 + B1_Mus2 SINE Alu 1 134 -13 3 832 15821 159 19 57 chrX 32420151 32420242 -134230054 + L1VL2 LINE L1 2808 2823 -3060 3 832 441 0 0 0 chrX 32420242 32420291 -134230005 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 832 15821 159 19 57 chrX 32420291 32422230 -134228066 + L1VL2 LINE L1 2824 4756 -1127 3 832 5274 140 19 1 chrX 32422231 32423082 -134227214 + Lx LINE L1 5787 6652 -2 3 832 483 18 0 0 chrX 32424378 32424434 -134225862 + (TC)n Simple_repeat Simple_repeat 2 57 0 3 832 375 23 0 0 chrX 32424435 32424479 -134225817 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 832 24 0 0 0 chrX 32424757 32424781 -134225515 + AT_rich Low_complexity Low_complexity 1 24 0 3 832 283 270 134 60 chrX 32424781 32424915 -134225381 + B1F SINE Alu 4 147 -2 3 832 235 333 47 70 chrX 32424910 32424930 -134225366 + ID_B1 SINE B4 70 195 -29 3 832 256 292 101 28 chrX 32424930 32425039 -134225257 + B1F SINE Alu 1 117 -32 3 832 864 291 14 24 chrX 32425822 32426033 -134224263 - B3 SINE B2 -6 210 2 3 832 1040 98 7 0 chrX 32426290 32426433 -134223863 - B1_Mus1 SINE Alu -1 147 4 3 832 371 256 160 10 chrX 32426434 32426634 -134223662 - B4 SINE B4 -62 230 1 3 832 230 310 127 0 chrX 32426896 32426967 -134223329 - ID4 SINE ID 0 83 4 3 832 213 296 0 0 chrX 32427200 32427244 -134223052 + ID4 SINE ID 4 47 -36 3 832 267 355 49 8 chrX 32427548 32427670 -134222626 - B1F SINE Alu -3 146 20 3 832 23964 146 6 2 chrX 32427921 32433092 -134217204 + L1_Mus3 LINE L1 1445 6634 -4 3 832 210 162 0 0 chrX 32433523 32433560 -134216736 + A-rich Low_complexity Low_complexity 1 37 0 3 832 447 106 0 0 chrX 32433726 32433792 -134216504 + (TATATG)n Simple_repeat Simple_repeat 3 68 0 3 832 204 40 0 0 chrX 32433792 32433816 -134216480 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 832 247 357 20 10 chrX 32434404 32434503 -134215793 + PB1D10 SINE Alu 3 102 -15 3 832 238 352 22 11 chrX 32435407 32435496 -134214800 - B3 SINE B2 -14 202 113 3 832 233 278 0 65 chrX 32435500 32435577 -134214719 - B4A SINE B4 -139 153 82 3 832 481 293 66 13 chrX 32435581 32435733 -134214563 - B3 SINE B2 -53 163 4 3 832 1872 146 244 30 chrX 32435847 32436314 -134213982 + RLTR6_Mm LTR ERV1 37 603 -51 3 832 60245 36 23 1 chrX 32436316 32443924 -134206372 + RLTR6-int LTR ERV1 2 7778 0 3 832 1802 140 252 31 chrX 32444037 32444486 -134205810 + RLTR6_Mm LTR ERV1 37 584 -70 3 832 279 0 0 0 chrX 32444575 32444606 -134205690 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 832 6852 108 24 12 chrX 32444726 32446490 -134203806 - L1_Mus1 LINE L1 0 6567 4795 3 832 7302 81 5 12 chrX 32446490 32447672 -134202624 - L1Md_F2 LINE L1 0 6582 5405 3 832 18032 154 12 16 chrX 32447670 32451000 -134199296 - L1Md_F2 LINE L1 -1075 4808 1492 3 832 6608 158 27 27 chrX 32450998 32452356 -134197940 - L1_Mus3 LINE L1 -690 5948 4601 3 832 629 189 9 0 chrX 32452355 32452466 -134197830 - Lx4A LINE L1 -228 6830 6719 3 832 2261 255 68 3 chrX 32453319 32453925 -134196371 - Lx2B LINE L1 -14 6986 6342 3 832 3081 159 66 13 chrX 32453922 32454082 -134196214 + L1_Mur2 LINE L1 4537 4730 -1147 3 832 216 0 0 0 chrX 32454082 32454106 -134196190 + (TAA)n Simple_repeat Simple_repeat 1 24 0 3 832 3081 159 66 13 chrX 32454106 32454555 -134195741 + L1_Mur2 LINE L1 4731 5178 -699 3 832 434 167 68 10 chrX 32454728 32454802 -134195494 - URR1B DNA MER1_type 0 225 148 3 832 324 0 0 0 chrX 32454802 32454838 -134195458 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 832 434 167 68 10 chrX 32454838 32454866 -134195430 - URR1B DNA MER1_type -78 147 118 3 832 350 284 71 47 chrX 32455199 32455369 -134194927 + RLTR1B LTR ERV1 166 339 -173 3 832 3030 246 21 11 chrX 32455678 32456669 -134193627 - Lx6 LINE L1 -1352 6108 5105 3 832 1202 217 40 12 chrX 32456674 32457000 -134193296 - Lx6 LINE L1 -2033 3844 3510 3 832 589 277 47 24 chrX 32457000 32457162 -134193134 - Lx6 LINE L1 -3397 2480 2324 3 832 690 13 0 0 chrX 32457162 32457241 -134193055 + (TC)n Simple_repeat Simple_repeat 2 80 0 3 832 589 277 47 24 chrX 32457241 32457289 -134193007 - Lx6 LINE L1 -3554 2323 2266 3 832 634 327 47 14 chrX 32457302 32457513 -134192783 - ORR1D2 LTR MaLR -152 218 1 3 832 492 389 4 0 chrX 32457515 32457749 -134192547 + Lx8 LINE L1 6956 7190 -283 3 832 918 284 35 35 chrX 32457852 32458220 -134192076 + ORR1D2 LTR MaLR 1 368 -2 3 832 504 282 7 21 chrX 32458375 32458520 -134191776 + Lx8 LINE L1 6640 6782 -691 3 832 232 445 7 0 chrX 32458896 32459033 -134191263 + RMER1C Other Other 535 672 -670 3 832 337 411 6 6 chrX 32459357 32459538 -134190758 + RMER1C Other Other 537 717 -625 3 832 288 445 4 0 chrX 32459581 32459810 -134190486 + RMER1C Other Other 412 641 -701 3 832 449 69 11 33 chrX 32460237 32460327 -134189969 + (CAAAA)n Simple_repeat Simple_repeat 3 90 0 3 832 236 350 138 19 chrX 32460446 32460606 -134189690 + RMER1C Other Other 488 666 -676 3 832 304 418 58 47 chrX 32461219 32461664 -134188632 + RMER1C Other Other 420 869 -473 3 832 328 409 40 57 chrX 32461687 32462110 -134188186 + RMER1C Other Other 375 790 -552 3 832 34535 84 5 14 chrX 32462173 32468586 -134181710 - L1Md_F3 LINE L1 0 6584 233 3 832 266 415 26 47 chrX 32469379 32469723 -134180573 + RMER1C Other Other 381 717 -625 3 832 294 29 0 0 chrX 32469793 32469828 -134180468 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3 832 415 426 24 25 chrX 32470118 32470787 -134179509 + RMER1C Other Other 412 883 -459 3 832 234 382 79 20 chrX 32470927 32471079 -134179217 + RMER1C Other Other 540 700 -642 3 832 530 416 35 43 chrX 32471186 32472068 -134178228 + RMER1C Other Other 375 882 -460 3 832 459 0 0 0 chrX 32472187 32472238 -134178058 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 832 368 437 27 15 chrX 32472602 32473137 -134177159 + RMER1C Other Other 378 833 -509 3 832 271 409 32 6 chrX 32473269 32473449 -134176847 + RMER1C Other Other 419 724 -618 3 832 391 411 42 53 chrX 32474082 32474625 -134175671 + RMER1C Other Other 452 837 -505 3 832 390 422 11 30 chrX 32475095 32475461 -134174835 + RMER1C Other Other 509 867 -475 3 832 368 409 26 19 chrX 32475556 32475820 -134174476 + RMER1C Other Other 464 729 -613 3 832 471 392 36 29 chrX 32476098 32476482 -134173814 + RMER1C Other Other 418 671 -671 3 832 225 184 0 58 chrX 32476563 32476615 -134173681 + RMER2 LTR ERV1 285 333 -234 3 832 371 383 60 30 chrX 32476761 32477060 -134173236 + RMER1C Other Other 541 848 -494 3 832 10791 185 30 7 chrX 32477321 32480308 -134169988 - Lx4B LINE L1 -276 6782 3720 3 832 3944 176 50 5 chrX 32480315 32481346 -134168950 + Lx3C LINE L1 5353 6423 -553 3 832 977 139 0 0 chrX 32481339 32481497 -134168799 + L1_Mm LINE L1 4206 4363 -1520 3 832 1581 67 13 5 chrX 32481507 32481731 -134168565 - MT2_Mm LTR ERVL 0 493 268 3 832 25031 134 15 70 chrX 32481731 32482223 -134168073 - L1Md_F LINE L1 -145 5738 5245 3 832 252 0 0 0 chrX 32482223 32482251 -134168045 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 832 25031 162 28 97 chrX 32482251 32487837 -134162459 - L1Md_F LINE L1 -639 5244 273 3 832 914 162 62 19 chrX 32487883 32488091 -134162205 - L1_Mm LINE L1 -433 5450 5234 3 832 1092 264 82 0 chrX 32488256 32488548 -134161748 + MER2 DNA MER2_type 6 321 -24 3 832 673 244 69 47 chrX 32488947 32489222 -134161074 + Lx7 LINE L1 5857 6137 -1559 3 832 1947 266 62 19 chrX 32489258 32489841 -134160455 + Lx7 LINE L1 6061 6668 -1028 3 832 471 145 0 0 chrX 32490098 32490186 -134160110 + RMER3D-int LTR ERVK 489 564 -2278 3 832 638 218 25 40 chrX 32490201 32490402 -134159894 + RMER3D-int LTR ERVK 652 849 -1993 3 832 573 217 39 43 chrX 32490488 32490786 -134159510 + RMER3D-int LTR ERVK 354 773 -2069 3 832 483 158 11 68 chrX 32490799 32490989 -134159307 + GA-rich Low_complexity Low_complexity 2 180 0 3 832 2108 203 85 60 chrX 32491011 32491356 -134158940 + RMER3D-int LTR ERVK 1016 1383 -1459 3 832 3176 53 5 0 chrX 32491356 32491750 -134158546 - MTA_Mm LTR MaLR 0 396 1 3 832 2108 211 88 78 chrX 32491750 32492085 -134158211 + RMER3D-int LTR ERVK 1384 1678 -1164 3 832 2697 213 119 7 chrX 32492107 32493023 -134157273 + MYSERV16_I-int LTR ERVK 1308 2326 0 3 832 2719 99 19 2 chrX 32493023 32493437 -134156859 + BGLII LTR ERVK 1 421 0 3 832 1368 201 75 44 chrX 32493678 32494107 -134156189 - RLTR21 LTR ERVK -153 1251 706 3 832 33456 58 2 3 chrX 32494107 32499109 -134151187 - L1Md_F2 LINE L1 -12 6570 1568 3 832 492 207 11 0 chrX 32499104 32499191 -134151105 - L1VL1 LINE L1 -6140 282 195 3 832 4643 152 5 0 chrX 32499192 32500000 -134150296 + MusHAL1 LINE L1 1090 1901 -811 3 832 16096 122 6 7 chrX 32500006 32503034 -134147262 + L1_Mus1 LINE L1 3112 6133 -434 1 832 1156 76 0 0 chrX 32503037 32503195 -134147101 + L1_Mus1 LINE L1 6410 6567 0 1 832 1303 204 20 92 chrX 32503197 32503645 -134146651 + L1_Mur2 LINE L1 3320 3735 -2142 2 832 762 329 42 19 chrX 32503628 32504063 -134146233 - Lx6 LINE L1 -164 7296 6506 3 832 367 261 22 7 chrX 32504068 32504203 -134146093 - L1_Mur2 LINE L1 -1407 4470 4334 4 832 24 0 0 0 chrX 32504488 32504512 -134145784 + AT_rich Low_complexity Low_complexity 1 24 0 5 833 180 0 0 0 chrX 32505905 32505925 -134144371 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 6 833 1354 142 25 4 chrX 32506414 32506655 -134143641 - L1_Mus4 LINE L1 0 6636 6391 7 833 795 158 199 0 chrX 32506699 32506940 -134143356 + L1_Mur2 LINE L1 3807 4095 -1782 8 833 10151 143 33 23 chrX 32506940 32507399 -134142897 + RLTR22_Mur LTR ERVK 1 460 -1388 9 833 403 60 0 29 chrX 32507399 32507468 -134142828 + (CTA)n Simple_repeat Simple_repeat 3 69 0 1 833 10151 143 33 23 chrX 32507468 32508838 -134141458 + RLTR22_Mur LTR ERVK 461 1848 0 9 833 2685 179 32 2 chrX 32508838 32509430 -134140866 + L1_Mur2 LINE L1 4092 4701 -1176 8 833 691 238 7 12 chrX 32509492 32509677 -134140619 - Lx4B LINE L1 -64 6994 6809 1 833 208 254 0 0 chrX 32509686 32509741 -134140555 + T-rich Low_complexity Low_complexity 1 55 0 1 833 28 48 0 0 chrX 32509807 32509849 -134140447 + AT_rich Low_complexity Low_complexity 1 42 0 1 833 1977 148 27 0 chrX 32509862 32510200 -134140096 - L1_Mus3 LINE L1 -8 6630 6284 1 833 591 232 35 14 chrX 32510229 32510373 -134139923 - B1_Mur2 SINE Alu -2 147 1 1 833 321 26 0 0 chrX 32510385 32510423 -134139873 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 1 833 473 287 13 0 chrX 32510431 32510581 -134139715 - Lx5 LINE L1 -74 6976 6825 1 833 398 191 0 0 chrX 32510590 32510674 -134139622 - Lx9 LINE L1 -7 7637 7554 1 833 681 232 57 10 chrX 32510674 32510866 -134139430 + Lx9 LINE L1 7201 7401 -243 1 833 275 0 0 28 chrX 32512397 32512433 -134137863 + (TTA)n Simple_repeat Simple_repeat 2 36 0 2 833 636 280 52 44 chrX 32512624 32512686 -134137610 - RLTR40 LTR ERVK 0 817 753 2 833 6161 90 35 2 chrX 32512686 32513137 -134137159 + RLTR13B1 LTR ERVK 1 469 -424 2 833 360 0 0 0 chrX 32513137 32513177 -134137119 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 833 6161 90 35 2 chrX 32513177 32513590 -134136706 + RLTR13B1 LTR ERVK 470 892 -1 2 833 636 280 52 44 chrX 32513590 32513777 -134136519 - RLTR40 LTR ERVK -65 752 566 2 833 425 168 9 0 chrX 32513777 32513884 -134136412 + CT-rich Low_complexity Low_complexity 2 109 0 2 833 1874 229 56 31 chrX 32513886 32514408 -134135888 - RLTR40 LTR ERVK -261 556 22 2 833 3082 206 51 16 chrX 32515863 32516602 -134133694 + RLTR14-int LTR ERV1 2436 3200 -2117 2 833 726 195 0 0 chrX 32516632 32516755 -134133541 - MMETn-int LTR ERVK -745 6661 6539 2 833 2873 176 15 44 chrX 32516750 32517693 -134132603 - MMETn-int LTR ERVK -1703 3141 2541 2 833 4773 64 0 7 chrX 32517693 32518302 -134131994 - L1Md_F2 LINE L1 -12 6570 5966 2 833 646 259 31 141 chrX 32518302 32518395 -134131901 - MMETn-int LTR ERVK -2124 5120 5040 2 833 6461 91 4 6 chrX 32518459 32519392 -134130904 + L1Md_F2 LINE L1 192 1122 -5494 2 833 30975 80 1 16 chrX 32519393 32524540 -134125756 + L1Md_F2 LINE L1 519 5586 -297 2 833 7547 75 4 0 chrX 32524540 32525532 -134124764 + L1Md_F2 LINE L1 5587 6582 0 2 833 29352 92 2 1 chrX 32525532 32530019 -134120277 + L1Md_F2 LINE L1 1115 5586 -297 2 833 7772 59 1 2 chrX 32530020 32531002 -134119294 + L1Md_F2 LINE L1 5588 6568 -14 2 833 2514 183 34 30 chrX 32531003 32531657 -134118639 - ETnERV2-int LTR ERVK -4283 3123 1934 3 833 1730 169 48 17 chrX 32531681 32532127 -134118169 - ETnERV2-int LTR ERVK -5321 2085 1678 3 833 671 230 17 69 chrX 32532668 32532991 -134117305 - ETnERV2-int LTR ERVK -2942 372 2 3 833 1146 175 187 45 chrX 32532993 32533351 -134116945 - RLTR9E LTR ERVK 0 409 1 3 833 6482 199 41 31 chrX 32533351 32533496 -134116800 + RLTR14-int LTR ERV1 3195 3347 -1970 3 833 4414 14 2 0 chrX 32533496 32533988 -134116308 - MT2_Mm LTR ERVL 0 493 1 3 833 6482 199 41 31 chrX 32533988 32535354 -134114942 + RLTR14-int LTR ERV1 3348 4721 -596 3 833 729 61 0 115 chrX 32535354 32535484 -134114812 + RLTRETN_Mm LTR ERVK 1 115 -207 3 833 10540 14 0 0 chrX 32535512 32537457 -134112839 - L1Md_A LINE L1 -5 6577 4633 3 833 1117 315 7 31 chrX 32538633 32539055 -134111241 + RodERV21-int LTR ERV1 1253 1664 -3327 3 833 324 78 15 15 chrX 32539055 32539120 -134111176 - L1Md_F2 LINE L1 -3 6579 6515 3 833 4288 63 40 4 chrX 32539120 32539891 -134110405 - L1Md_F2 LINE L1 -520 6062 5273 3 833 3691 144 21 24 chrX 32539891 32540015 -134110281 + L1_Mus3 LINE L1 5978 6100 -538 3 833 2745 67 0 0 chrX 32540015 32540357 -134109939 + ORR1A1 LTR MaLR 1 342 -4 3 833 3691 144 21 24 chrX 32540357 32540887 -134109409 + L1_Mus3 LINE L1 6101 6630 -8 3 833 1006 206 25 3 chrX 32540888 32541171 -134109125 + L1_Mur3 LINE L1 2999 3287 -2593 3 833 1574 259 21 28 chrX 32541178 32541475 -134108821 + Lx6 LINE L1 5607 5903 -1557 4 833 2039 196 17 14 chrX 32541475 32541895 -134108401 + MTC LTR MaLR 1 421 0 4 833 1574 259 21 28 chrX 32541895 32542129 -134108167 + Lx6 LINE L1 5904 6134 -1326 4 833 1436 220 22 40 chrX 32542635 32542957 -134107339 + RLTR21 LTR ERVK 9 324 -1248 4 833 850 154 11 51 chrX 32542998 32543176 -134107120 + RLTR21 LTR ERVK 547 717 -855 4 833 12692 112 5 34 chrX 32543179 32545999 -134104297 + L1Md_F2 LINE L1 217 3165 -2718 4 833 9559 83 0 4 chrX 32545982 32547349 -134102947 + L1Md_F2 LINE L1 4225 5586 -297 4 833 7338 73 11 2 chrX 32547349 32548324 -134101972 + L1Md_F2 LINE L1 5587 6570 -12 4 833 1301 220 65 34 chrX 32548324 32548754 -134101542 + RLTR21 LTR ERVK 708 1254 -150 4 833 2839 98 7 2 chrX 32548993 32549412 -134100884 - BGLII LTR ERVK 0 421 1 4 833 2623 202 117 14 chrX 32549412 32550336 -134099960 - MYSERV16_I-int LTR ERVK 0 2326 1308 4 833 529 221 40 33 chrX 32550358 32550508 -134099788 - RMER3D-int LTR ERVK -1164 1678 1528 4 833 1523 193 13 36 chrX 32550536 32550693 -134099603 - RMER3D-int LTR ERVK -1309 1533 1384 4 833 3231 51 2 0 chrX 32550693 32551088 -134099208 + MTA_Mm LTR MaLR 1 396 0 4 833 1523 183 165 29 chrX 32551088 32551410 -134098886 - RMER3D-int LTR ERVK -1459 1383 1014 4 833 547 166 76 17 chrX 32551455 32551693 -134098603 + CT-rich Low_complexity Low_complexity 1 251 0 4 833 469 229 72 37 chrX 32551701 32552023 -134098273 - RMER3D-int LTR ERVK -2038 804 354 4 833 597 212 25 40 chrX 32552089 32552290 -134098006 - RMER3D-int LTR ERVK -1993 849 652 4 833 462 148 0 0 chrX 32552305 32552393 -134097903 - RMER3D-int LTR ERVK -2278 564 489 4 833 1832 257 47 21 chrX 32552657 32553233 -134097063 - Lx7 LINE L1 -1042 6654 6064 5 833 602 270 51 29 chrX 32553268 32553543 -134096753 - Lx7 LINE L1 -1559 6137 5857 5 833 590 276 29 68 chrX 32553845 32554051 -134096245 + B3A SINE B2 1 198 0 5 833 327 25 0 0 chrX 32554119 32554159 -134096137 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 5 833 871 273 10 0 chrX 32554245 32554450 -134095846 - B3 SINE B2 -9 207 1 5 833 1077 267 82 0 chrX 32554870 32555162 -134095134 - MER2 DNA MER2_type -24 321 6 5 833 876 156 62 19 chrX 32555327 32555536 -134094760 + L1_Mm LINE L1 5234 5451 -432 5 833 25745 154 23 62 chrX 32555582 32561038 -134089258 + L1Md_F LINE L1 217 5234 -649 5 833 468 0 0 0 chrX 32561038 32561090 -134089206 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 833 25745 131 18 47 chrX 32561090 32561583 -134088713 + L1Md_F LINE L1 5235 5737 -146 5 833 1604 63 13 5 chrX 32561583 32561807 -134088489 + MT2_Mm LTR ERVL 268 493 0 5 833 977 139 0 0 chrX 32561817 32561975 -134088321 - L1_Mm LINE L1 -1520 4363 4206 5 833 3931 177 50 5 chrX 32561968 32563000 -134087296 - Lx3C LINE L1 -553 6423 5353 6 833 10501 184 30 12 chrX 32563012 32565858 -134084438 + Lx4A LINE L1 3725 6631 -427 6 833 24972 44 0 0 chrX 32565858 32568973 -134081323 + L1_Mm LINE L1 1710 4824 -1059 6 833 432 382 35 29 chrX 32569043 32569594 -134080702 - RMER1C Other Other -477 865 362 6 833 440 423 12 0 chrX 32569689 32569937 -134080359 - RMER1C Other Other -671 671 421 6 833 386 405 26 19 chrX 32570213 32570477 -134079819 - RMER1C Other Other -613 729 464 6 833 332 430 11 28 chrX 32570572 32570935 -134079361 - RMER1C Other Other -475 867 511 6 833 379 420 37 48 chrX 32571409 32571952 -134078344 - RMER1C Other Other -505 837 378 6 833 313 410 27 7 chrX 32572585 32572780 -134077516 - RMER1C Other Other -581 761 419 6 833 463 427 29 17 chrX 32572897 32573436 -134076860 - RMER1C Other Other -509 833 378 6 833 333 0 0 0 chrX 32573796 32573833 -134076463 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 833 275 0 29 0 chrX 32573833 32573867 -134076429 + (TA)n Simple_repeat Simple_repeat 2 37 0 7 833 325 415 35 29 chrX 32573976 32574289 -134076007 - RMER1C Other Other -605 737 423 7 833 604 383 43 21 chrX 32574331 32574781 -134075515 - RMER1C Other Other -468 874 412 7 833 314 430 29 30 chrX 32575261 32575936 -134074360 - RMER1C Other Other -484 858 444 7 833 213 65 0 0 chrX 32576201 32576232 -134074064 + (T)n Simple_repeat Simple_repeat 1 31 0 7 833 32296 121 11 29 chrX 32577436 32579199 -134071097 + L1Md_F3 LINE L1 233 1968 -3915 7 833 207 0 0 0 chrX 32579199 32579222 -134071074 + (CAA)n Simple_repeat Simple_repeat 2 24 0 7 833 32296 70 2 11 chrX 32579222 32582879 -134067417 + L1Md_F3 LINE L1 1969 5585 -298 7 833 7613 66 10 0 chrX 32582880 32583867 -134066429 + L1Md_F3 LINE L1 5588 6584 0 7 833 340 393 42 48 chrX 32583928 32584614 -134065682 - RMER1C Other Other -468 874 375 7 833 244 338 13 0 chrX 32585515 32585592 -134064704 - RMER1C Other Other -666 676 599 7 833 275 52 33 33 chrX 32585709 32585769 -134064527 + (TTTTG)n Simple_repeat Simple_repeat 3 62 0 8 833 308 444 6 25 chrX 32586197 32586628 -134063668 - RMER1C Other Other -556 786 412 7 833 290 424 66 4 chrX 32586840 32587112 -134063184 - RMER1C Other Other -519 823 535 8 833 253 244 12 25 chrX 32587165 32587245 -134063051 + Lx9 LINE L1 6168 6246 -1398 8 833 504 282 7 21 chrX 32587487 32587632 -134062664 - Lx8 LINE L1 -691 6782 6640 8 833 956 287 47 22 chrX 32587787 32588147 -134062149 - ORR1D2 LTR MaLR -1 369 1 8 833 493 389 4 0 chrX 32588252 32588486 -134061810 - Lx8 LINE L1 -283 7190 6956 8 833 653 322 50 18 chrX 32588488 32588706 -134061590 + ORR1D2 LTR MaLR 1 225 -145 8 833 698 240 57 33 chrX 32588712 32588758 -134061538 + L1_Mur3 LINE L1 2265 2310 -3567 8 833 351 0 0 0 chrX 32588758 32588797 -134061499 + (GA)n Simple_repeat Simple_repeat 2 40 0 8 833 698 240 57 33 chrX 32588797 32588961 -134061335 + L1_Mur3 LINE L1 2311 2478 -3399 8 833 1208 217 37 9 chrX 32588961 32589287 -134061009 + L1_Mur3 LINE L1 3511 3845 -2035 8 833 1460 240 44 2 chrX 32589292 32589702 -134060594 + L1_Mur3 LINE L1 5105 5531 -349 8 833 23596 69 181 20 chrX 32589698 32594008 -134056288 + Lx2B LINE L1 335 5589 -297 8 833 8431 33 0 1 chrX 32594008 32595004 -134055292 + L1Md_T LINE L1 5587 6581 -1 9 833 23596 143 144 22 chrX 32595004 32595602 -134054694 + Lx2B LINE L1 5590 6111 -1352 8 833 24 32 0 0 chrX 32595742 32595773 -134054523 + AT_rich Low_complexity Low_complexity 1 31 0 9 833 327 252 45 0 chrX 32595911 32596038 -134054258 - RLTR1B LTR ERV1 -170 454 259 9 833 472 111 97 39 chrX 32596412 32596440 -134053856 + URR1B DNA MER1_type 117 149 -76 9 833 216 0 0 0 chrX 32596440 32596464 -134053832 + (TA)n Simple_repeat Simple_repeat 2 25 0 9 833 472 111 97 39 chrX 32596464 32596538 -134053758 + URR1B DNA MER1_type 150 225 0 9 833 3091 158 66 13 chrX 32596711 32597160 -134053136 - L1_Mur2 LINE L1 -699 5178 4731 9 833 188 35 35 0 chrX 32597160 32597189 -134053107 + (TTA)n Simple_repeat Simple_repeat 1 30 0 9 833 3091 158 66 13 chrX 32597189 32597349 -134052947 - L1_Mur2 LINE L1 -1147 4730 4537 9 833 2093 262 69 15 chrX 32597346 32597958 -134052338 + Lx2B LINE L1 6345 6989 -14 8 833 607 207 9 0 chrX 32598814 32598925 -134051371 + Lx4A LINE L1 6719 6830 -228 9 833 6793 158 27 7 chrX 32598924 32600248 -134050048 + L1_Mus3 LINE L1 4601 5948 -690 9 833 23516 148 13 53 chrX 32600246 32603753 -134046543 + L1_Mus1 LINE L1 1492 4795 -1088 9 833 7212 82 4 9 chrX 32603753 32604753 -134045543 + L1Md_F2 LINE L1 5588 6582 0 1 833 23516 117 20 32 chrX 32604753 32606511 -134043785 + L1_Mus1 LINE L1 4796 6567 0 9 833 261 0 0 0 chrX 32606631 32606660 -134043636 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 833 452 305 65 13 chrX 32606744 32606897 -134043399 + B3 SINE B2 3 163 -53 1 833 213 284 0 69 chrX 32606906 32606978 -134043318 + B4A SINE B4 87 153 -139 1 833 235 352 22 11 chrX 32606982 32607071 -134043225 + B3 SINE B2 113 202 -14 1 833 264 350 20 10 chrX 32607975 32608076 -134042220 - PB1D10 SINE Alu -15 102 1 1 833 283 279 15 0 chrX 32608012 32608080 -134042216 - B4A SINE B4 -142 150 82 1 833 474 225 0 0 chrX 32608651 32608762 -134041534 + (TA)n Simple_repeat Simple_repeat 1 111 0 1 833 208 147 0 0 chrX 32608940 32608974 -134041322 + (T)n Simple_repeat Simple_repeat 1 34 0 1 833 22061 143 6 2 chrX 32609405 32614576 -134035720 - L1_Mus3 LINE L1 -4 6634 1445 1 833 321 322 49 8 chrX 32614826 32614948 -134035348 + B1F SINE Alu 20 146 -3 1 833 21 36 0 0 chrX 32615196 32615224 -134035072 + AT_rich Low_complexity Low_complexity 1 28 0 1 833 358 264 162 10 chrX 32615859 32616057 -134034239 + B4 SINE B4 3 230 -62 1 833 921 127 14 0 chrX 32616058 32616200 -134034096 + B1_Mus1 SINE Alu 4 147 -1 1 833 799 289 39 24 chrX 32616455 32616661 -134033635 + B3 SINE B2 2 210 -6 1 833 247 283 99 45 chrX 32617444 32617555 -134032741 - B1F SINE Alu -32 117 1 1 833 215 333 46 84 chrX 32617555 32617575 -134032721 - ID_B1 SINE B4 -29 195 70 1 833 280 259 95 69 chrX 32617570 32617686 -134032610 - B1F SINE Alu -2 147 29 1 833 615 14 0 0 chrX 32618006 32618078 -134032218 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 833 465 19 0 0 chrX 32618079 32618133 -134032163 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 833 26 88 0 0 chrX 32619297 32619365 -134030931 + AT_rich Low_complexity Low_complexity 1 68 0 1 833 21 0 0 0 chrX 32619408 32619429 -134030867 + AT_rich Low_complexity Low_complexity 1 21 0 1 833 5167 146 19 1 chrX 32619429 32620280 -134030016 - Lx LINE L1 -2 6652 5787 1 833 17325 161 20 37 chrX 32620281 32622236 -134028060 - L1VL2 LINE L1 -1127 4756 2810 1 833 267 93 0 0 chrX 32622236 32622279 -134028017 + (TTA)n Simple_repeat Simple_repeat 2 44 0 1 833 913 127 0 0 chrX 32622289 32622423 -134027873 - B1_Mus2 SINE Alu -13 134 1 1 833 17325 177 39 46 chrX 32622423 32625108 -134025188 - L1VL2 LINE L1 -3075 2808 300 1 833 624 327 97 34 chrX 32625238 32625507 -134024789 - B4A SINE B4 -3 289 4 1 833 912 237 19 0 chrX 32625740 32625947 -134024349 - B3 SINE B2 -5 211 1 1 833 384 252 75 8 chrX 32626093 32626213 -134024083 - B1F SINE Alu -1 148 21 1 833 454 289 0 0 chrX 32626273 32626377 -134023919 - B3 SINE B2 -15 201 98 1 833 4625 131 12 19 chrX 32627219 32628016 -134022280 - YREP_Mm Unknown Unknown -35 1777 986 1 833 346 325 115 39 chrX 32628021 32628255 -134022041 - L2 LINE L2 -1119 2300 2049 1 833 228 86 0 0 chrX 32628351 32628386 -134021910 + (CCA)n Simple_repeat Simple_repeat 1 35 0 1 833 574 320 40 15 chrX 32628432 32628639 -134021657 + B4A SINE B4 83 290 -2 1 833 181 347 52 10 chrX 32628653 32628749 -134021547 - L2 LINE L2 -1394 2025 1926 1 833 231 320 62 37 chrX 32629112 32629274 -134021022 - L2 LINE L2 -1760 1659 1494 1 833 5837 131 6 27 chrX 32630589 32631556 -134018740 - Lx3A LINE L1 -7 6974 6028 1 833 283 303 56 70 chrX 32632020 32632304 -134017992 + RMER17C LTR ERVK 83 362 -48 1 833 800 127 35 21 chrX 32632584 32632729 -134017567 + L1_Mus1 LINE L1 6421 6567 0 1 833 4050 68 0 33 chrX 32632733 32633571 -134016725 - L1Md_A LINE L1 -4124 1759 964 1 104 22874 69 2 1 chrX 32633566 32637299 -134012997 - L1Md_F2 LINE L1 -1 6581 2850 1 834 2683 96 0 2 chrX 32637310 32637705 -134012591 - L1Md_F2 LINE L1 -3513 2370 1977 1 834 3608 167 8 3 chrX 32637703 32638351 -134011945 - L1Md_F2 LINE L1 -5633 1091 441 1 834 233 416 20 43 chrX 32639121 32639420 -134010876 + RMER1C Other Other 426 717 -625 1 834 338 431 30 39 chrX 32639905 32640440 -134009856 + RMER1C Other Other 375 898 -444 1 834 582 385 40 17 chrX 32640944 32641290 -134009006 + RMER1C Other Other 521 874 -468 1 834 269 342 42 33 chrX 32641611 32641843 -134008453 + RMER1C Other Other 414 648 -694 1 834 435 410 32 28 chrX 32642117 32642767 -134007529 + RMER1C Other Other 378 881 -461 1 834 362 383 46 10 chrX 32642897 32643092 -134007204 + RMER1C Other Other 462 663 -679 1 834 30669 37 0 0 chrX 32643912 32648775 -134001521 - L1Md_Gf LINE L1 -832 5054 95 1 834 3347 8 0 0 chrX 32648775 32649153 -134001143 + L1Md_T LINE L1 6205 6582 0 1 834 307 418 50 53 chrX 32649173 32649514 -134000782 + RMER1C Other Other 498 837 -505 1 834 468 0 0 0 chrX 32649541 32649593 -134000703 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 834 286 432 12 43 chrX 32650031 32650353 -133999943 + RMER1C Other Other 535 846 -496 1 834 413 401 26 19 chrX 32650469 32650733 -133999563 + RMER1C Other Other 464 729 -613 1 834 396 423 43 23 chrX 32650855 32651249 -133999047 + RMER1C Other Other 418 819 -523 1 834 452 379 50 51 chrX 32651309 32652125 -133998171 + RMER1C Other Other 362 884 -458 1 834 10394 183 33 10 chrX 32652228 32655212 -133995084 - Lx4A LINE L1 -279 6779 3720 1 834 3435 176 48 9 chrX 32655219 32656152 -133994144 + Lx3C LINE L1 5353 6316 -660 1 834 1553 198 16 3 chrX 32656154 32656468 -133993828 - Lx2 LINE L1 -857 6140 5823 1 834 17297 193 11 61 chrX 32656481 32662309 -133987987 - L1_Mus1 LINE L1 0 6567 1071 1 834 2013 251 63 55 chrX 32662306 32663430 -133986866 - L1Md_F LINE L1 -5433 1108 120 1 834 797 177 69 16 chrX 32663467 32663656 -133986640 - L1_Mm LINE L1 -433 5450 5252 1 834 813 283 10 0 chrX 32663799 32664004 -133986292 + B3 SINE B2 1 207 -9 1 834 381 43 0 0 chrX 32664088 32664135 -133986161 + (TTCC)n Simple_repeat Simple_repeat 4 50 0 1 834 648 297 29 68 chrX 32664203 32664409 -133985887 - B3A SINE B2 0 198 1 1 834 680 265 49 35 chrX 32664711 32664996 -133985300 + Lx7 LINE L1 5857 6145 -1551 1 834 1999 262 50 21 chrX 32665022 32665599 -133984697 + Lx7 LINE L1 6061 6654 -1042 1 834 506 133 0 0 chrX 32665863 32665951 -133984345 + RMER3D-int LTR ERVK 489 564 -2278 1 834 552 225 35 40 chrX 32665966 32666165 -133984131 + RMER3D-int LTR ERVK 652 849 -1993 1 834 594 228 31 40 chrX 32666251 32666549 -133983747 + RMER3D-int LTR ERVK 354 804 -2038 1 834 503 184 0 63 chrX 32666562 32666753 -133983543 + GA-rich Low_complexity Low_complexity 2 180 0 1 834 2406 183 85 61 chrX 32666775 32667121 -133983175 + RMER3D-int LTR ERVK 1016 1383 -1459 1 834 3384 38 2 0 chrX 32667121 32667516 -133982780 - MTA_Mm LTR MaLR 0 396 1 1 834 2406 188 88 79 chrX 32667516 32667851 -133982445 + RMER3D-int LTR ERVK 1384 1678 -1164 1 834 2848 211 116 9 chrX 32667874 32668794 -133981502 + MYSERV16_I-int LTR ERVK 1308 2326 0 1 834 2872 98 7 7 chrX 32668794 32669215 -133981081 + BGLII LTR ERVK 1 421 0 1 834 1135 214 70 50 chrX 32669485 32669884 -133980412 - RLTR21 LTR ERVK -460 1112 706 1 834 12078 86 5 1 chrX 32669884 32672222 -133978074 - L1Md_F2 LINE L1 -12 6570 4225 1 834 9773 115 129 5 chrX 32672204 32673197 -133977099 - L1Md_A LINE L1 -750 3164 1961 1 834 211 71 48 0 chrX 32673197 32673239 -133977057 + (TTG)n Simple_repeat Simple_repeat 2 45 0 1 834 9773 151 69 19 chrX 32673239 32674782 -133975514 - L1Md_A LINE L1 -1954 1960 446 1 834 621 191 17 51 chrX 32674785 32674962 -133975334 - RLTR21 LTR ERVK -855 717 547 1 834 198 0 0 0 chrX 32674970 32674992 -133975304 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1 834 1325 218 24 42 chrX 32675009 32675339 -133974957 - RLTR21 LTR ERVK -1248 324 1 1 834 257 307 0 17 chrX 32675735 32675851 -133974445 - Lx6 LINE L1 -15 7445 7332 1 834 464 317 26 18 chrX 32675851 32676079 -133974217 - Lx6 LINE L1 -1326 6134 5905 1 834 1914 204 17 15 chrX 32676085 32676494 -133973802 - MTC LTR MaLR 0 421 12 1 834 1295 218 14 21 chrX 32676504 32676794 -133973502 - Lx7 LINE L1 -1792 5904 5617 1 834 1111 206 28 3 chrX 32676809 32677091 -133973205 - L1_Mur3 LINE L1 -2593 3287 2999 1 834 3612 153 18 23 chrX 32677092 32677623 -133972673 - L1_Mus3 LINE L1 -8 6630 6101 1 834 2717 70 0 3 chrX 32677623 32677966 -133972330 - ORR1A1 LTR MaLR -4 342 1 1 834 3612 153 18 23 chrX 32677966 32678090 -133972206 - L1_Mus3 LINE L1 -538 6100 5978 1 834 2476 58 3 6 chrX 32678091 32678405 -133971891 + L1Md_F2 LINE L1 5274 5586 -297 1 834 7266 79 6 14 chrX 32678406 32679407 -133970889 + L1Md_F2 LINE L1 5588 6580 -2 1 834 1360 311 37 43 chrX 32679419 32679959 -133970337 - RodERV21-int LTR ERV1 -3339 1652 1116 1 834 331 268 59 66 chrX 32680103 32680239 -133970057 - RodERV21-int LTR ERV1 -3964 1027 893 1 834 209 169 49 33 chrX 32681278 32681339 -133968957 + GA-rich Low_complexity Low_complexity 2 63 0 1 834 451 227 25 62 chrX 32681504 32681664 -133968632 - L1_Rod LINE L1 -313 5534 5381 1 834 2036 216 65 29 chrX 32681664 32682218 -133968078 + RLTR31A_Mm LTR ERVK 11 584 0 1 834 258 196 107 10 chrX 32682218 32682321 -133967975 - L1_Rod LINE L1 -475 5372 5260 1 834 799 142 7 47 chrX 32682464 32682612 -133967684 - B1_Mus1 SINE Alu 0 148 7 1 834 307 250 30 30 chrX 32682860 32682959 -133967337 - RMER17C-int LTR ERVK -2 3236 3138 1 834 3625 317 42 48 chrX 32683027 32683318 -133966978 - RodERV21-int LTR ERV1 -198 4793 4501 1 834 2461 123 35 54 chrX 32683318 32683746 -133966550 - RLTR9B2 LTR ERVK 0 420 1 1 834 3625 317 42 48 chrX 32683746 32685355 -133964941 - RodERV21-int LTR ERV1 -491 4500 2905 1 834 3368 74 20 18 chrX 32685470 32685965 -133964331 + LTRIS2 LTR ERV1 69 564 0 1 834 730 75 0 0 chrX 32686192 32686285 -133964011 + RLTR1B-int LTR ERV1 201 293 -3006 1 834 957 126 90 17 chrX 32686629 32686807 -133963489 + RMER16-int LTR ERVK 141 331 -5075 1 834 4104 153 52 18 chrX 32686793 32687498 -133962798 + RMER16-int LTR ERVK 690 1418 -3988 1 834 2657 199 112 40 chrX 32687502 32688395 -133961901 + RLTR1B-int LTR ERV1 835 1796 -3267 1 834 183 42 0 0 chrX 32688395 32688419 -133961877 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 834 5238 85 156 91 chrX 32688419 32689662 -133960634 + RLTR1B-int LTR ERV1 1259 2555 -744 1 834 1126 150 58 5 chrX 32689649 32689910 -133960386 + RLTR1B-int LTR ERV1 2669 2813 -486 1 834 1089 167 54 25 chrX 32690136 32690376 -133959920 + RLTR1B-int LTR ERV1 4791 5037 -26 1 834 3499 60 20 12 chrX 32690376 32690868 -133959428 + LTRIS2 LTR ERV1 69 564 0 1 834 1170 273 3 7 chrX 32691342 32691652 -133958644 - MuRRS4-int LTR ERV1 -118 4945 4637 1 834 751 196 0 7 chrX 32691652 32691801 -133958495 - MuRRS4-int LTR ERV1 -128 4935 4788 1 834 5277 156 58 32 chrX 32691792 32694099 -133956197 - MuRRS4-int LTR ERV1 -792 4271 1104 1 834 1482 272 33 7 chrX 32694121 32694543 -133955753 - MuRRS4-int LTR ERV1 -3619 1444 1012 1 834 692 274 16 78 chrX 32694692 32694949 -133955347 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 1 834 627 145 92 17 chrX 32694949 32695068 -133955228 - MuRRS4-int LTR ERV1 -4186 877 750 1 834 333 172 80 34 chrX 32695052 32695170 -133955126 - RMER16-int LTR ERVK -3958 1448 1386 1 834 4284 131 25 9 chrX 32695257 32695942 -133954354 - RMER16-int LTR ERVK -4045 1361 666 1 834 1223 236 66 22 chrX 32695971 32696291 -133954005 - MuRRS4-int LTR ERV1 -4388 675 342 1 834 672 242 51 77 chrX 32696626 32697177 -133953119 - MuRRS4-int LTR ERV1 -4565 498 5 1 834 606 227 96 29 chrX 32697179 32697388 -133952908 - LTRIS4 LTR ERV1 0 507 285 1 834 341 22 22 0 chrX 32698053 32698099 -133952197 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 834 481 347 27 42 chrX 32698259 32698737 -133951559 - RodERV21-int LTR ERV1 -3035 4056 3586 2 834 1350 284 14 49 chrX 32698862 32699292 -133951004 - RodERV21-int LTR ERV1 -2273 2718 2304 2 834 4569 105 24 0 chrX 32699297 32699961 -133950335 - L1_Mus3 LINE L1 -247 6391 5712 2 834 1531 137 0 0 chrX 32699963 32700189 -133950107 + L1_Mus3 LINE L1 5473 5698 -185 2 834 1529 196 12 21 chrX 32700189 32700517 -133949779 - RLTR14 LTR ERV1 -51 331 7 2 834 8769 191 104 26 chrX 32700542 32702507 -133947789 - RLTR14-int LTR ERV1 -5 5312 3195 2 834 1111 175 187 45 chrX 32702507 32702865 -133947431 + RLTR9E LTR ERVK 1 409 0 2 834 715 217 11 56 chrX 32702867 32703130 -133947166 + ETnERV2-int LTR ERVK 2 317 -2997 2 834 346 146 0 18 chrX 32703185 32703241 -133947055 + ETnERV2-int LTR ERVK 1074 1128 -6278 2 834 290 167 0 0 chrX 32703676 32703730 -133946566 + RMER16-int LTR ERVK 141 194 -5212 2 834 492 18 0 0 chrX 32703733 32703790 -133946506 + (TTC)n Simple_repeat Simple_repeat 2 58 0 2 834 1892 181 64 12 chrX 32703797 32704216 -133946080 + ETnERV2-int LTR ERVK 1648 2088 -5318 2 834 2865 175 38 30 chrX 32704237 32704891 -133945405 + ETnERV2-int LTR ERVK 1934 3135 -4271 2 834 7722 71 1 10 chrX 32704892 32705958 -133944338 - L1Md_F2 LINE L1 -14 6568 5513 2 834 843 142 6 105 chrX 32705958 32706139 -133944157 + ETnERV2-int LTR ERVK 2028 2190 -2654 2 834 3818 131 47 3 chrX 32706364 32706985 -133943311 + ETnERV2-int LTR ERVK 3441 4088 -3318 2 834 800 227 148 10 chrX 32706971 32707281 -133943015 + ETnERV2-int LTR ERVK 4597 4949 -2295 2 834 34010 89 4 18 chrX 32707307 32713653 -133936643 - L1Md_F2 LINE L1 -12 6570 315 2 834 7082 89 1 7 chrX 32713654 32714596 -133935700 - L1Md_F LINE L1 -5494 1025 90 2 834 414 173 40 10 chrX 32714655 32714751 -133935545 + MMETn-int LTR ERVK 2473 2553 -2291 2 834 4928 55 0 7 chrX 32714751 32715360 -133934936 + L1Md_F2 LINE L1 5966 6570 -12 2 834 322 66 49 0 chrX 32715373 32715434 -133934862 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 2 834 3160 179 13 39 chrX 32715434 32716352 -133933944 + MMETn-int LTR ERVK 2541 3719 -1125 2 834 742 211 0 0 chrX 32716347 32716470 -133933826 + MMETn-int LTR ERVK 6539 6661 -745 2 834 3446 206 44 17 chrX 32716501 32717246 -133933050 - RLTR14-int LTR ERV1 -2117 3200 2436 2 834 1659 215 63 44 chrX 32718689 32719214 -133931082 + RLTR40 LTR ERVK 22 556 -261 2 834 623 127 8 0 chrX 32719214 32719332 -133930964 + (GA)n Simple_repeat Simple_repeat 2 120 0 2 834 431 262 59 64 chrX 32719346 32719487 -133930809 + RLTR40 LTR ERVK 615 752 -65 2 834 6326 96 24 5 chrX 32719487 32720363 -133929933 - RLTR13B1 LTR ERVK 0 893 1 2 834 431 262 59 64 chrX 32720363 32720425 -133929871 + RLTR40 LTR ERVK 753 817 0 2 834 270 0 0 0 chrX 32720616 32720646 -133929650 + (TAA)n Simple_repeat Simple_repeat 2 31 0 2 834 333 0 0 0 chrX 32720646 32720683 -133929613 + (GAA)n Simple_repeat Simple_repeat 2 38 0 2 834 1284 27 0 0 chrX 32721056 32721203 -133929093 + B1_Mus2 SINE Alu 1 147 0 2 834 198 0 0 0 chrX 32721203 32721225 -133929071 + (A)n Simple_repeat Simple_repeat 1 22 0 2 834 648 237 57 10 chrX 32722412 32722604 -133927692 - Lx9 LINE L1 -243 7401 7201 2 834 401 191 0 0 chrX 32722604 32722688 -133927608 + Lx9 LINE L1 7554 7637 -7 2 834 488 287 13 0 chrX 32722697 32722847 -133927449 + Lx5 LINE L1 6825 6976 -74 2 834 387 0 0 0 chrX 32722855 32722898 -133927398 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 2 834 646 208 34 14 chrX 32722913 32723059 -133927237 + B1_Mur3 SINE Alu 1 149 0 2 834 1914 159 45 0 chrX 32723074 32723427 -133926869 + L1_Mus3 LINE L1 6262 6630 -8 2 834 26 50 0 0 chrX 32723439 32723479 -133926817 + AT_rich Low_complexity Low_complexity 1 40 0 2 834 227 263 0 0 chrX 32723545 32723602 -133926694 + A-rich Low_complexity Low_complexity 4 60 0 2 834 717 256 19 14 chrX 32723611 32723825 -133926471 + Lx4B LINE L1 6809 7023 -35 2 834 2717 174 37 2 chrX 32723861 32724450 -133925846 - L1_Mur2 LINE L1 -1176 4701 4092 2 834 10099 141 39 25 chrX 32724450 32725825 -133924471 - RLTR22_Mur LTR ERVK 0 1848 461 2 834 676 83 0 18 chrX 32725825 32725936 -133924360 + (TAG)n Simple_repeat Simple_repeat 3 111 0 2 834 10099 141 39 25 chrX 32725936 32726383 -133923913 - RLTR22_Mur LTR ERVK -1388 460 3 2 834 1169 194 17 14 chrX 32726383 32726671 -133923625 - L1_Mur2 LINE L1 -1782 4095 3807 2 834 1278 142 25 4 chrX 32726715 32726956 -133923340 + L1_Mus4 LINE L1 6391 6636 0 2 834 8680 23 0 0 chrX 32726988 32728046 -133922250 + L1Md_T LINE L1 4529 5586 -297 2 834 8006 57 0 0 chrX 32728046 32729042 -133921254 + L1Md_T LINE L1 5587 6582 0 2 834 180 0 0 0 chrX 32729411 32729431 -133920865 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 2 834 24 0 0 0 chrX 32730823 32730847 -133919449 + AT_rich Low_complexity Low_complexity 1 24 0 2 834 295 276 22 7 chrX 32731131 32731266 -133919030 + L1_Mur2 LINE L1 4334 4470 -1407 2 834 718 331 43 26 chrX 32731271 32731705 -133918591 + Lx6 LINE L1 6506 7296 -164 2 834 1441 194 20 90 chrX 32731682 32732136 -133918160 - L1_Mur2 LINE L1 -2136 3741 3320 2 834 1159 70 6 0 chrX 32732138 32732295 -133918001 - L1_Mus1 LINE L1 0 6567 6410 2 834 20887 122 6 3 chrX 32732295 32735286 -133915010 - L1_Mus1 LINE L1 -431 6136 3134 2 834 210 37 0 0 chrX 32735286 32735313 -133914983 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 834 20887 134 7 4 chrX 32735313 32736152 -133914144 - L1_Mus1 LINE L1 -2750 3133 2295 2 834 1304 179 52 0 chrX 32736153 32736404 -133913892 + L1VL1 LINE L1 3 266 -6156 2 834 27454 108 16 51 chrX 32736404 32739835 -133910461 + L1Md_F2 LINE L1 277 3463 -2420 2 834 1136 90 73 0 chrX 32739835 32740013 -133910283 + B2_Mm2 SINE B2 5 195 0 2 834 27454 87 7 63 chrX 32740013 32742131 -133908165 + L1Md_F2 LINE L1 3464 5585 -298 2 834 7623 71 1 0 chrX 32742132 32743115 -133907181 + L1Md_F2 LINE L1 5587 6570 -12 2 834 3587 77 8 30 chrX 32743116 32743943 -133906353 + L1Md_A LINE L1 964 1759 -4124 2 834 812 120 35 21 chrX 32743947 32744092 -133906204 - L1_Mus1 LINE L1 0 6567 6421 2 834 305 307 56 70 chrX 32744370 32744654 -133905642 - RMER17C LTR ERVK -48 362 83 2 834 5254 122 72 29 chrX 32745106 32746026 -133904270 + Lx3A LINE L1 6016 6974 -7 2 834 228 362 28 21 chrX 32747364 32747505 -133902791 + L2 LINE L2 1518 1659 -1760 2 834 549 339 40 15 chrX 32747976 32748183 -133902113 - B4A SINE B4 -2 290 83 2 834 228 86 0 0 chrX 32748229 32748264 -133902032 + (TGG)n Simple_repeat Simple_repeat 1 35 0 2 834 331 341 111 34 chrX 32748360 32748594 -133901702 + L2 LINE L2 2049 2300 -1119 2 834 4623 129 15 18 chrX 32748599 32749393 -133900903 + YREP_Mm Unknown Unknown 986 1777 -35 2 834 427 291 10 0 chrX 32750235 32750338 -133899958 + B3 SINE B2 98 201 -15 2 834 365 261 75 8 chrX 32750398 32750518 -133899778 + B1F SINE Alu 21 148 -1 2 834 958 227 19 0 chrX 32750664 32750871 -133899425 + B3 SINE B2 1 211 -5 2 834 673 322 93 30 chrX 32751104 32751373 -133898923 + B4A SINE B4 4 289 -3 2 834 22 56 0 0 chrX 32751382 32751418 -133898878 + AT_rich Low_complexity Low_complexity 1 36 0 2 834 15780 176 33 65 chrX 32751511 32754205 -133896091 + L1VL2 LINE L1 300 2807 -3076 2 834 955 119 0 0 chrX 32754205 32754339 -133895957 + B1_Mus2 SINE Alu 1 134 -13 2 834 15780 159 19 61 chrX 32754339 32756389 -133893907 + L1VL2 LINE L1 2808 4756 -1127 2 834 5301 139 19 1 chrX 32756390 32757241 -133893055 + Lx LINE L1 5787 6652 -2 2 834 375 23 0 0 chrX 32758538 32758582 -133891714 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 834 453 19 0 0 chrX 32758583 32758637 -133891659 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 834 273 269 95 69 chrX 32758956 32759072 -133891224 + B1F SINE Alu 29 147 -2 2 834 241 325 47 70 chrX 32759067 32759087 -133891209 + ID_B1 SINE B4 70 195 -29 2 834 273 274 101 28 chrX 32759087 32759196 -133891100 + B1F SINE Alu 1 117 -32 2 834 841 296 14 24 chrX 32759979 32760190 -133890106 - B3 SINE B2 -6 210 2 2 834 1052 91 7 0 chrX 32760446 32760589 -133889707 - B1_Mus1 SINE Alu -1 147 4 2 834 371 251 160 10 chrX 32760590 32760790 -133889506 - B4 SINE B4 -62 230 1 2 834 230 310 127 0 chrX 32761050 32761121 -133889175 - ID4 SINE ID 0 83 4 2 834 213 296 0 0 chrX 32761354 32761398 -133888898 + ID4 SINE ID 4 47 -36 2 834 291 339 49 8 chrX 32761702 32761824 -133888472 - B1F SINE Alu -3 146 20 2 834 24129 145 5 2 chrX 32762075 32767247 -133883049 + L1_Mus3 LINE L1 1445 6634 -4 2 834 540 193 0 0 chrX 32767880 32767989 -133882307 + (TATATG)n Simple_repeat Simple_repeat 2 110 0 2 835 267 350 20 10 chrX 32768566 32768667 -133881629 + PB1D10 SINE Alu 1 102 -15 2 835 246 352 22 11 chrX 32769571 32769660 -133880636 - B3 SINE B2 -14 202 113 2 835 233 278 0 65 chrX 32769664 32769741 -133880555 - B4A SINE B4 -139 153 82 2 835 481 293 66 13 chrX 32769745 32769897 -133880399 - B3 SINE B2 -53 163 4 2 835 1881 143 244 30 chrX 32770011 32770478 -133879818 + RLTR6_Mm LTR ERV1 37 603 -51 2 835 24977 33 20 0 chrX 32770480 32773899 -133876397 + RLTR6-int LTR ERV1 2 3565 -4213 2 835 234 202 54 18 chrX 32773899 32773977 -133876319 + LTRIS_Mus LTR ERV1 544 587 0 2 835 297 0 0 0 chrX 32774066 32774099 -133876197 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 835 6551 108 24 17 chrX 32774219 32775993 -133874303 - L1_Mus1 LINE L1 0 6567 4795 2 835 6893 82 4 14 chrX 32775992 32777178 -133873118 - L1Md_F2 LINE L1 -1 6581 5405 2 835 17994 154 12 16 chrX 32777176 32780506 -133869790 - L1Md_F2 LINE L1 -1075 4808 1492 2 835 6851 158 27 6 chrX 32780504 32781826 -133868470 - L1_Mus3 LINE L1 -690 5948 4601 2 835 629 189 9 0 chrX 32781825 32781936 -133868360 - Lx4A LINE L1 -228 6830 6719 2 835 2213 258 68 3 chrX 32782789 32783395 -133866901 - Lx2B LINE L1 -14 6986 6342 2 835 3100 158 66 13 chrX 32783392 32783552 -133866744 + L1_Mur2 LINE L1 4537 4730 -1147 2 835 216 0 0 0 chrX 32783552 32783576 -133866720 + (TAA)n Simple_repeat Simple_repeat 1 24 0 2 835 3100 158 66 13 chrX 32783576 32784025 -133866271 + L1_Mur2 LINE L1 4731 5178 -699 2 835 435 148 78 19 chrX 32784198 32784272 -133866024 - URR1B DNA MER1_type 0 225 146 2 835 288 0 0 0 chrX 32784272 32784304 -133865992 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 835 435 148 78 19 chrX 32784304 32784332 -133865964 - URR1B DNA MER1_type -80 145 118 2 835 350 284 71 47 chrX 32784664 32784834 -133865462 + RLTR1B LTR ERV1 166 339 -173 2 835 3030 246 21 11 chrX 32785143 32786134 -133864162 - Lx6 LINE L1 -1352 6108 5105 2 835 1202 217 40 12 chrX 32786139 32786465 -133863831 - Lx6 LINE L1 -2033 3844 3510 2 835 647 267 47 24 chrX 32786465 32786627 -133863669 - Lx6 LINE L1 -3397 2480 2324 2 835 495 0 0 0 chrX 32786627 32786682 -133863614 + (TC)n Simple_repeat Simple_repeat 2 56 0 2 835 647 267 47 24 chrX 32786682 32786730 -133863566 - Lx6 LINE L1 -3554 2323 2266 2 835 631 327 47 14 chrX 32786743 32786954 -133863342 - ORR1D2 LTR MaLR -152 218 1 2 835 492 389 4 0 chrX 32786956 32787190 -133863106 + Lx8 LINE L1 6956 7190 -283 2 835 921 284 35 35 chrX 32787297 32787665 -133862631 + ORR1D2 LTR MaLR 1 368 -2 2 835 504 282 7 21 chrX 32787820 32787965 -133862331 + Lx8 LINE L1 6640 6782 -691 2 835 232 445 7 0 chrX 32788340 32788477 -133861819 + RMER1C Other Other 535 672 -670 2 835 337 411 6 6 chrX 32788801 32788982 -133861314 + RMER1C Other Other 537 717 -625 2 835 288 445 4 0 chrX 32789025 32789254 -133861042 + RMER1C Other Other 412 641 -701 2 835 302 252 162 19 chrX 32789619 32789773 -133860523 + L1MEf LINE L1 1882 2057 -4143 3 835 236 350 138 19 chrX 32789889 32790049 -133860247 + RMER1C Other Other 488 666 -676 3 835 304 418 58 47 chrX 32790662 32791107 -133859189 + RMER1C Other Other 420 869 -473 3 835 303 411 40 57 chrX 32791130 32791553 -133858743 + RMER1C Other Other 375 790 -552 3 835 34562 71 3 2 chrX 32791615 32796224 -133854072 - L1Md_F3 LINE L1 0 6584 1970 3 835 234 0 0 0 chrX 32796224 32796250 -133854046 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 835 34562 125 10 23 chrX 32796250 32798013 -133852283 - L1Md_F3 LINE L1 -3914 1969 233 3 835 234 418 26 47 chrX 32798806 32799150 -133851146 + RMER1C Other Other 381 717 -625 3 835 294 29 0 0 chrX 32799220 32799255 -133851041 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3 835 419 426 25 24 chrX 32799545 32800214 -133850082 + RMER1C Other Other 412 883 -459 3 835 234 382 79 20 chrX 32800354 32800506 -133849790 + RMER1C Other Other 540 700 -642 3 835 542 416 33 41 chrX 32800613 32801143 -133849153 + RMER1C Other Other 412 874 -468 3 835 314 418 35 29 chrX 32801185 32801498 -133848798 + RMER1C Other Other 423 737 -605 3 835 408 20 0 0 chrX 32801614 32801663 -133848633 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 835 368 437 27 15 chrX 32802027 32802562 -133847734 + RMER1C Other Other 378 833 -509 3 835 271 409 32 6 chrX 32802694 32802874 -133847422 + RMER1C Other Other 419 724 -618 3 835 391 412 42 53 chrX 32803507 32804050 -133846246 + RMER1C Other Other 452 837 -505 3 835 378 425 11 30 chrX 32804520 32804886 -133845410 + RMER1C Other Other 509 867 -475 3 835 370 409 26 19 chrX 32804981 32805245 -133845051 + RMER1C Other Other 464 729 -613 3 835 471 419 12 0 chrX 32805524 32805772 -133844524 + RMER1C Other Other 421 671 -671 3 835 225 184 0 58 chrX 32805989 32806041 -133844255 + RMER2 LTR ERV1 285 333 -234 3 835 371 383 60 30 chrX 32806187 32806486 -133843810 + RMER1C Other Other 541 848 -494 3 835 10774 184 30 8 chrX 32806747 32809735 -133840561 - Lx4B LINE L1 -276 6782 3720 3 835 1727 196 9 3 chrX 32809742 32810085 -133840211 + L1_Mur1 LINE L1 5353 5697 -189 3 835 562 197 74 0 chrX 32810073 32810195 -133840101 + Lx3C LINE L1 6293 6423 -553 3 835 1004 133 0 0 chrX 32810188 32810346 -133839950 + L1_Mm LINE L1 4206 4363 -1520 3 835 1594 67 13 5 chrX 32810356 32810580 -133839716 - MT2_Mm LTR ERVL 0 493 268 3 835 24671 134 20 70 chrX 32810580 32811072 -133839224 - L1Md_F LINE L1 -145 5738 5245 3 835 630 0 0 0 chrX 32811072 32811142 -133839154 + (TA)n Simple_repeat Simple_repeat 2 71 0 3 835 24671 162 34 92 chrX 32811142 32816704 -133833592 - L1Md_F LINE L1 -639 5244 250 3 835 914 162 62 19 chrX 32816750 32816958 -133833338 - L1_Mm LINE L1 -433 5450 5234 3 835 1106 260 82 0 chrX 32817123 32817415 -133832881 + MER2 DNA MER2_type 6 321 -24 3 835 666 244 69 47 chrX 32817814 32818089 -133832207 + Lx7 LINE L1 5857 6137 -1559 3 835 1956 267 50 19 chrX 32818125 32818701 -133831595 + Lx7 LINE L1 6061 6654 -1042 3 835 471 145 0 0 chrX 32818965 32819053 -133831243 + RMER3D-int LTR ERVK 489 564 -2278 3 835 641 206 63 31 chrX 32819068 32819314 -133830982 + RMER3D-int LTR ERVK 652 849 -1993 3 835 599 214 39 43 chrX 32819355 32819653 -133830643 + RMER3D-int LTR ERVK 354 773 -2069 3 835 483 158 11 68 chrX 32819666 32819856 -133830440 + GA-rich Low_complexity Low_complexity 2 180 0 3 835 2091 205 85 60 chrX 32819878 32820223 -133830073 + RMER3D-int LTR ERVK 1016 1383 -1459 3 835 3176 53 5 0 chrX 32820223 32820617 -133829679 - MTA_Mm LTR MaLR 0 396 1 3 835 2091 215 88 78 chrX 32820617 32820952 -133829344 + RMER3D-int LTR ERVK 1384 1678 -1164 3 835 2792 212 112 8 chrX 32820974 32821897 -133828399 + MYSERV16_I-int LTR ERVK 1308 2326 0 3 835 2811 100 7 2 chrX 32821897 32822316 -133827980 + BGLII LTR ERVK 1 421 0 3 835 1284 194 86 55 chrX 32822557 32822986 -133827310 - RLTR21 LTR ERVK -153 1251 706 3 835 1571 44 44 0 chrX 32822986 32823191 -133827105 - L1Md_F2 LINE L1 -12 6570 6357 3 835 403 261 22 7 chrX 32823216 32823351 -133826945 - L1_Mur2 LINE L1 -1407 4470 4334 3 835 24 0 0 0 chrX 32823636 32823660 -133826636 + AT_rich Low_complexity Low_complexity 1 24 0 3 835 180 0 0 0 chrX 32825053 32825073 -133825223 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 3 835 1352 142 25 4 chrX 32825562 32825803 -133824493 - L1_Mus4 LINE L1 0 6636 6391 3 835 879 153 199 0 chrX 32825847 32826088 -133824208 + L1_Mur2 LINE L1 3807 4095 -1782 3 835 10219 143 33 23 chrX 32826088 32826547 -133823749 + RLTR22_Mur LTR ERVK 1 460 -1388 3 835 403 60 0 29 chrX 32826547 32826616 -133823680 + (CTA)n Simple_repeat Simple_repeat 3 69 0 3 835 10219 143 33 23 chrX 32826616 32827986 -133822310 + RLTR22_Mur LTR ERVK 461 1848 0 3 835 2868 179 32 2 chrX 32827986 32828578 -133821718 + L1_Mur2 LINE L1 4092 4701 -1176 3 835 740 269 19 14 chrX 32828614 32828825 -133821471 - Lx4B LINE L1 -38 7020 6809 3 835 28 48 0 0 chrX 32828952 32828994 -133821302 + AT_rich Low_complexity Low_complexity 1 42 0 3 835 1964 148 27 0 chrX 32829007 32829345 -133820951 - L1_Mus3 LINE L1 -8 6630 6284 3 835 598 231 35 14 chrX 32829374 32829519 -133820777 - B1_Mur2 SINE Alu -1 148 1 3 835 357 24 0 0 chrX 32829531 32829573 -133820723 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 3 835 517 287 13 0 chrX 32829581 32829731 -133820565 - Lx5 LINE L1 -74 6976 6825 3 835 403 191 0 0 chrX 32829740 32829824 -133820472 - Lx9 LINE L1 -7 7637 7554 3 835 740 232 57 10 chrX 32829824 32830016 -133820280 + Lx9 LINE L1 7201 7401 -243 3 835 329 0 0 24 chrX 32831547 32831589 -133818707 + (TTA)n Simple_repeat Simple_repeat 2 42 0 3 835 662 295 44 36 chrX 32831780 32831842 -133818454 - RLTR40 LTR ERVK 0 817 753 3 835 6186 90 34 2 chrX 32831842 32832293 -133818003 + RLTR13B1 LTR ERVK 1 469 -424 3 835 360 0 0 0 chrX 32832293 32832333 -133817963 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 835 6186 90 34 2 chrX 32832333 32832747 -133817549 + RLTR13B1 LTR ERVK 470 892 -1 3 835 662 295 44 36 chrX 32832747 32832934 -133817362 - RLTR40 LTR ERVK -65 752 566 3 835 515 154 8 0 chrX 32832934 32833051 -133817245 + CT-rich Low_complexity Low_complexity 2 119 0 3 835 1674 231 56 31 chrX 32833053 32833575 -133816721 - RLTR40 LTR ERVK -261 556 22 3 835 2610 202 104 17 chrX 32835030 32835734 -133814562 + RLTR14-int LTR ERV1 2436 3200 -2117 3 835 780 195 0 0 chrX 32835764 32835887 -133814409 - MMETn-int LTR ERVK -745 6661 6539 3 835 3128 177 19 44 chrX 32835882 32836821 -133813475 - MMETn-int LTR ERVK -1703 3141 2541 3 835 4854 64 0 5 chrX 32836821 32837429 -133812867 - L1Md_F2 LINE L1 -12 6570 5966 3 835 710 258 35 142 chrX 32837429 32837525 -133812771 - MMETn-int LTR ERVK -2124 5120 5037 3 835 6995 92 3 7 chrX 32837580 32838520 -133811776 + L1Md_F2 LINE L1 187 1122 -5494 3 835 6640 117 7 50 chrX 32838521 32840447 -133809849 + L1Md_F LINE L1 315 2155 -3728 3 835 296 83 21 0 chrX 32840438 32840486 -133809810 + L1Md_F2 LINE L1 1074 1122 -5494 3 835 33179 80 1 16 chrX 32840487 32845634 -133804662 + L1Md_F2 LINE L1 519 5586 -297 3 835 7660 74 4 0 chrX 32845634 32846626 -133803670 + L1Md_F2 LINE L1 5587 6582 0 3 835 31482 92 2 1 chrX 32846626 32851111 -133799185 + L1Md_F2 LINE L1 1115 5586 -297 3 835 7813 59 4 2 chrX 32851112 32852091 -133798205 + L1Md_F2 LINE L1 5588 6568 -14 3 835 2776 183 34 30 chrX 32852092 32852746 -133797550 - ETnERV2-int LTR ERVK -4283 3123 1934 3 835 1963 183 74 19 chrX 32852767 32853240 -133797056 - ETnERV2-int LTR ERVK -5318 2088 1590 3 835 279 182 0 18 chrX 32853707 32853763 -133796533 - RLTR45-int LTR ERVK -5099 2145 2091 3 835 736 228 17 69 chrX 32853758 32854081 -133796215 - ETnERV2-int LTR ERVK -2942 372 2 3 835 1181 172 187 45 chrX 32854083 32854441 -133795855 - RLTR9E LTR ERVK 0 409 1 3 835 7063 198 43 29 chrX 32854441 32855947 -133794349 + RLTR14-int LTR ERV1 3195 4721 -596 3 835 695 61 0 115 chrX 32855947 32856077 -133794219 + RLTRETN_Mm LTR ERVK 1 115 -207 3 835 41052 26 7 7 chrX 32856104 32863711 -133786585 - L1Md_A LINE L1 -5 6577 1 3 835 1061 160 30 30 chrX 32863737 32863969 -133786327 + RLTRETN_Mm LTR ERVK 91 322 0 3 835 3700 55 0 7 chrX 32863969 32864425 -133785871 + ETnERV-int LTR ERVK 1 453 -2861 3 835 1930 74 4 7 chrX 32864422 32864693 -133785603 + ETnERV-int LTR ERVK 593 862 -3982 3 835 1037 157 39 6 chrX 32864690 32864869 -133785427 + ETnERV-int LTR ERVK 1177 1361 -4045 3 835 434 170 10 96 chrX 32864969 32865073 -133785223 + ETnERV-int LTR ERVK 1354 1448 -3958 3 835 604 130 111 17 chrX 32865057 32865174 -133785122 + MuRRS4-int LTR ERV1 750 877 -4186 3 835 733 266 16 74 chrX 32865174 32865430 -133784866 - LSU-rRNA_Hsa rRNA rRNA -1371 3664 3424 3 835 1533 267 33 7 chrX 32865577 32865999 -133784297 + MuRRS4-int LTR ERV1 1012 1444 -3619 3 835 5263 161 40 37 chrX 32866027 32868334 -133781962 + MuRRS4-int LTR ERV1 1104 4271 -792 3 835 758 164 0 7 chrX 32868339 32868474 -133781822 + MuRRS4-int LTR ERV1 4802 4935 -128 3 835 487 219 0 19 chrX 32868474 32868581 -133781715 + RLTR6-int LTR ERV1 7417 7521 -257 3 835 379 100 0 0 chrX 32868586 32868636 -133781660 + L1Md_T LINE L1 5537 5586 -297 3 835 8341 43 0 1 chrX 32868637 32869633 -133780663 + L1Md_T LINE L1 5588 6582 0 3 835 10136 12 2 0 chrX 32869634 32870771 -133779525 + L1Md_A LINE L1 4448 5586 -297 3 835 8238 42 12 0 chrX 32870771 32871755 -133778541 + L1Md_A LINE L1 5587 6582 0 3 835 664 291 22 5 chrX 32871779 32872003 -133778293 + MuRRS4-int LTR ERV1 4706 4933 -130 3 835 3477 322 46 51 chrX 32872400 32874195 -133776101 + RodERV21-int LTR ERV1 2718 4500 -491 3 835 2558 118 35 56 chrX 32874195 32874624 -133775672 + RLTR9B2 LTR ERVK 1 420 0 3 835 3477 322 46 51 chrX 32874624 32874915 -133775381 + RodERV21-int LTR ERV1 4501 4793 -198 3 835 252 253 12 37 chrX 32874983 32875065 -133775231 + RMER17C-int LTR ERVK 3138 3217 -21 3 835 768 142 7 50 chrX 32875337 32875478 -133774818 + B1_Mus1 SINE Alu 14 148 0 3 835 267 196 107 10 chrX 32875617 32875720 -133774576 + L1_Rod LINE L1 5260 5372 -475 3 835 1919 212 74 38 chrX 32875720 32876274 -133774022 - RLTR31A_Mm LTR ERVK 0 584 11 3 835 463 228 24 65 chrX 32876274 32876443 -133773853 + L1_Rod LINE L1 5381 5542 -305 3 835 228 179 35 35 chrX 32876602 32876660 -133773636 + CT-rich Low_complexity Low_complexity 2 59 0 3 835 1255 301 44 55 chrX 32877986 32878530 -133771766 + RodERV21-int LTR ERV1 1127 1664 -3327 3 835 336 78 15 15 chrX 32878530 32878595 -133771701 - L1Md_F2 LINE L1 -3 6579 6515 3 835 4581 63 40 6 chrX 32878595 32879366 -133770930 - L1Md_F2 LINE L1 -520 6062 5274 3 835 3756 142 21 24 chrX 32879367 32879491 -133770805 + L1_Mus3 LINE L1 5978 6100 -538 3 835 2743 67 0 3 chrX 32879491 32879834 -133770462 + ORR1A1 LTR MaLR 1 342 -4 3 835 3756 142 21 24 chrX 32879834 32880364 -133769932 + L1_Mus3 LINE L1 6101 6630 -8 3 835 1097 206 25 3 chrX 32880365 32880648 -133769648 + L1_Mur3 LINE L1 2999 3287 -2593 3 835 1741 260 20 30 chrX 32880655 32880952 -133769344 + Lx6 LINE L1 5607 5903 -1557 3 835 2057 196 17 14 chrX 32880952 32881372 -133768924 + MTC LTR MaLR 1 421 0 3 835 1741 260 20 30 chrX 32881372 32881614 -133768682 + Lx6 LINE L1 5904 6141 -1319 3 835 1315 220 22 40 chrX 32882112 32882434 -133767862 + RLTR21 LTR ERVK 9 324 -1248 3 835 390 21 0 0 chrX 32882451 32882498 -133767798 + (T)n Simple_repeat Simple_repeat 1 47 0 3 835 783 160 11 51 chrX 32882505 32882683 -133767613 + RLTR21 LTR ERVK 547 717 -855 3 835 13575 112 5 33 chrX 32882686 32885504 -133764792 + L1Md_F2 LINE L1 217 3165 -2718 3 835 10236 83 0 3 chrX 32885487 32886853 -133763443 + L1Md_F2 LINE L1 4225 5586 -297 3 835 7442 74 11 2 chrX 32886853 32887831 -133762465 + L1Md_F2 LINE L1 5587 6573 -9 3 835 1116 218 70 38 chrX 32887831 32888258 -133762038 + RLTR21 LTR ERVK 711 1254 -150 3 835 2849 96 7 2 chrX 32888497 32888916 -133761380 - BGLII LTR ERVK 0 421 1 3 835 2885 201 117 14 chrX 32888916 32889840 -133760456 - MYSERV16_I-int LTR ERVK 0 2326 1308 3 835 577 221 40 33 chrX 32889862 32890012 -133760284 - RMER3D-int LTR ERVK -1164 1678 1528 3 835 1636 193 13 36 chrX 32890040 32890197 -133760099 - RMER3D-int LTR ERVK -1309 1533 1384 3 835 3213 51 2 0 chrX 32890197 32890592 -133759704 + MTA_Mm LTR MaLR 1 396 0 3 835 1636 183 165 29 chrX 32890592 32890914 -133759382 - RMER3D-int LTR ERVK -1459 1383 1014 3 835 547 166 76 17 chrX 32890959 32891197 -133759099 + CT-rich Low_complexity Low_complexity 1 251 0 3 835 521 233 72 37 chrX 32891205 32891527 -133758769 - RMER3D-int LTR ERVK -2038 804 354 3 835 657 209 88 33 chrX 32891548 32891794 -133758502 - RMER3D-int LTR ERVK -1993 849 652 3 835 488 148 0 0 chrX 32891809 32891897 -133758399 - RMER3D-int LTR ERVK -2278 564 489 3 835 1987 267 46 23 chrX 32892133 32892778 -133757518 - Lx7 LINE L1 -794 6666 6027 4 835 679 270 51 29 chrX 32892772 32893047 -133757249 - Lx7 LINE L1 -1559 6137 5857 4 835 606 271 29 68 chrX 32893349 32893555 -133756741 + B3A SINE B2 1 198 0 4 835 327 25 0 0 chrX 32893624 32893664 -133756632 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 4 835 874 273 10 0 chrX 32893750 32893955 -133756341 - B3 SINE B2 -9 207 1 4 835 1082 267 82 0 chrX 32894375 32894667 -133755629 - MER2 DNA MER2_type -24 321 6 4 835 947 164 62 14 chrX 32894831 32895041 -133755255 + L1_Mm LINE L1 5234 5453 -430 4 104 25992 152 21 63 chrX 32895073 32901049 -133749247 + L1Md_F LINE L1 217 5738 -145 4 836 1594 67 13 5 chrX 32901049 32901273 -133749023 + MT2_Mm LTR ERVL 268 493 0 4 836 1004 133 0 0 chrX 32901283 32901441 -133748855 - L1_Mm LINE L1 -1520 4363 4206 4 836 3920 178 50 5 chrX 32901434 32902466 -133747830 - Lx3C LINE L1 -553 6423 5353 4 836 10653 181 30 11 chrX 32902478 32905470 -133744826 + Lx4A LINE L1 3725 6779 -279 4 836 449 400 31 24 chrX 32905802 32906696 -133743600 - RMER1C Other Other -464 878 362 4 836 386 405 26 19 chrX 32906972 32907236 -133743060 - RMER1C Other Other -613 729 464 4 836 319 426 27 36 chrX 32907334 32907699 -133742597 - RMER1C Other Other -589 753 392 4 836 379 419 37 48 chrX 32908165 32908708 -133741588 - RMER1C Other Other -505 837 378 4 836 307 396 38 10 chrX 32909341 32909543 -133740753 - RMER1C Other Other -618 724 419 4 836 447 430 29 17 chrX 32909653 32910192 -133740104 - RMER1C Other Other -509 833 378 4 836 477 0 0 0 chrX 32910552 32910605 -133739691 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 836 590 401 41 34 chrX 32910724 32911524 -133738772 - RMER1C Other Other -460 882 375 4 836 234 389 73 18 chrX 32911713 32911878 -133738418 - RMER1C Other Other -571 771 540 4 836 338 432 27 27 chrX 32912006 32912680 -133737616 - RMER1C Other Other -484 858 444 4 836 230 405 6 6 chrX 32913039 32913208 -133737088 - RMER1C Other Other -625 717 549 4 836 32499 119 11 26 chrX 32914175 32915934 -133734362 + L1Md_F3 LINE L1 233 1968 -3915 4 836 207 0 0 0 chrX 32915934 32915957 -133734339 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 836 32499 68 2 11 chrX 32915957 32919612 -133730684 + L1Md_F3 LINE L1 1969 5585 -298 4 836 7662 61 11 0 chrX 32919613 32920599 -133729697 + L1Md_F3 LINE L1 5588 6584 0 4 836 340 393 42 48 chrX 32920681 32921347 -133728949 - RMER1C Other Other -461 881 401 4 836 244 338 13 0 chrX 32922248 32922325 -133727971 - RMER1C Other Other -666 676 599 4 836 292 111 0 31 chrX 32922445 32922510 -133727786 + (TTTTG)n Simple_repeat Simple_repeat 3 65 0 4 836 308 444 6 25 chrX 32922937 32923368 -133726928 - RMER1C Other Other -556 786 412 4 836 271 442 0 0 chrX 32923714 32923852 -133726444 - RMER1C Other Other -670 672 535 4 836 253 244 12 25 chrX 32923905 32923985 -133726311 + Lx9 LINE L1 6168 6246 -1398 4 836 472 296 7 21 chrX 32924227 32924372 -133725924 - Lx8 LINE L1 -691 6782 6640 4 836 956 287 47 22 chrX 32924527 32924887 -133725409 - ORR1D2 LTR MaLR -1 369 1 4 836 486 391 4 0 chrX 32924993 32925226 -133725070 - Lx8 LINE L1 -284 7189 6956 4 836 653 322 50 18 chrX 32925228 32925446 -133724850 + ORR1D2 LTR MaLR 1 225 -145 4 836 698 240 57 33 chrX 32925452 32925498 -133724798 + L1_Mur3 LINE L1 2265 2310 -3567 4 836 297 0 0 0 chrX 32925498 32925531 -133724765 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 836 698 240 57 33 chrX 32925531 32925695 -133724601 + L1_Mur3 LINE L1 2311 2478 -3399 4 836 1208 217 37 9 chrX 32925695 32926021 -133724275 + L1_Mur3 LINE L1 3511 3845 -2035 4 836 1475 237 44 2 chrX 32926026 32926436 -133723860 + L1_Mur3 LINE L1 5105 5531 -349 4 836 18123 71 5 19 chrX 32926432 32930743 -133719553 + Lx2B LINE L1 335 5589 -297 4 836 8409 34 0 1 chrX 32930743 32931739 -133718557 + L1Md_T LINE L1 5587 6581 -1 4 836 18123 141 13 29 chrX 32931739 32932337 -133717959 + Lx2B LINE L1 5590 6111 -1352 4 836 24 32 0 0 chrX 32932477 32932508 -133717788 + AT_rich Low_complexity Low_complexity 1 31 0 4 836 314 263 45 0 chrX 32932646 32932773 -133717523 - RLTR1B LTR ERV1 -170 454 259 4 836 472 111 97 39 chrX 32933148 32933176 -133717120 + URR1B DNA MER1_type 117 149 -76 4 836 504 0 0 0 chrX 32933176 32933232 -133717064 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 836 472 111 97 39 chrX 32933232 32933306 -133716990 + URR1B DNA MER1_type 150 225 0 4 836 3091 158 66 13 chrX 32933479 32933928 -133716368 - L1_Mur2 LINE L1 -699 5178 4731 4 836 188 35 35 0 chrX 32933928 32933957 -133716339 + (TTA)n Simple_repeat Simple_repeat 1 30 0 4 836 3091 158 66 13 chrX 32933957 32934117 -133716179 - L1_Mur2 LINE L1 -1147 4730 4537 4 836 2093 262 69 15 chrX 32934114 32934726 -133715570 + Lx2B LINE L1 6345 6989 -14 4 836 607 207 9 0 chrX 32935582 32935693 -133714603 + Lx4A LINE L1 6719 6830 -228 4 836 6778 158 27 6 chrX 32935692 32937015 -133713281 + L1_Mus3 LINE L1 4601 5948 -690 4 836 23692 146 13 53 chrX 32937013 32940521 -133709775 + L1_Mus1 LINE L1 1492 4795 -1088 4 836 7289 79 4 10 chrX 32940521 32941522 -133708774 + L1Md_F2 LINE L1 5588 6582 0 4 836 23692 116 20 40 chrX 32941522 32943294 -133707002 + L1_Mus1 LINE L1 4796 6567 0 4 836 441 0 0 0 chrX 32943414 32943463 -133706833 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 836 452 305 65 13 chrX 32943547 32943700 -133706596 + B3 SINE B2 3 163 -53 4 836 213 284 0 69 chrX 32943709 32943781 -133706515 + B4A SINE B4 87 153 -139 4 836 235 352 22 11 chrX 32943785 32943874 -133706422 + B3 SINE B2 113 202 -14 4 836 264 350 20 10 chrX 32944778 32944879 -133705417 - PB1D10 SINE Alu -15 102 1 4 836 283 279 15 0 chrX 32944815 32944883 -133705413 - B4A SINE B4 -142 150 82 4 836 339 247 0 0 chrX 32945454 32945543 -133704753 + (TA)n Simple_repeat Simple_repeat 1 89 0 4 836 208 147 0 0 chrX 32945721 32945755 -133704541 + (T)n Simple_repeat Simple_repeat 1 34 0 4 836 25431 146 6 2 chrX 32946186 32951357 -133698939 - L1_Mus3 LINE L1 -4 6634 1445 4 836 321 322 49 8 chrX 32951607 32951729 -133698567 + B1F SINE Alu 20 146 -3 4 836 21 36 0 0 chrX 32951977 32952005 -133698291 + AT_rich Low_complexity Low_complexity 1 28 0 4 836 213 319 130 0 chrX 32952303 32952372 -133697924 + ID4 SINE ID 4 81 -2 4 836 358 264 162 10 chrX 32952642 32952840 -133697456 + B4 SINE B4 3 230 -62 4 836 967 113 14 0 chrX 32952841 32952983 -133697313 + B1_Mus1 SINE Alu 4 147 -1 4 836 799 289 39 24 chrX 32953239 32953445 -133696851 + B3 SINE B2 2 210 -6 4 836 247 283 99 45 chrX 32954228 32954339 -133695957 - B1F SINE Alu -32 117 1 4 836 215 333 46 84 chrX 32954339 32954359 -133695937 - ID_B1 SINE B4 -29 195 70 4 836 280 259 95 69 chrX 32954354 32954470 -133695826 - B1F SINE Alu -2 147 29 4 836 543 16 0 0 chrX 32954790 32954854 -133695442 + (TG)n Simple_repeat Simple_repeat 2 65 0 4 836 357 24 0 0 chrX 32954855 32954897 -133695399 + (GA)n Simple_repeat Simple_repeat 2 43 0 4 836 26 88 0 0 chrX 32956064 32956132 -133694164 + AT_rich Low_complexity Low_complexity 1 68 0 4 836 21 0 0 0 chrX 32956175 32956196 -133694100 + AT_rich Low_complexity Low_complexity 1 21 0 4 836 5222 141 19 1 chrX 32956196 32957041 -133693255 - Lx LINE L1 -2 6652 5793 4 836 17363 160 19 37 chrX 32957048 32959006 -133691290 - L1VL2 LINE L1 -1127 4756 2810 4 836 267 93 0 0 chrX 32959006 32959049 -133691247 + (TTA)n Simple_repeat Simple_repeat 2 44 0 4 836 925 119 0 0 chrX 32959059 32959193 -133691103 - B1_Mus2 SINE Alu -13 134 1 4 836 17363 176 37 48 chrX 32959193 32961887 -133688409 - L1VL2 LINE L1 -3075 2808 300 4 836 624 327 97 34 chrX 32962017 32962286 -133688010 - B4A SINE B4 -3 289 4 4 836 912 237 19 0 chrX 32962519 32962726 -133687570 - B3 SINE B2 -5 211 1 4 836 384 252 75 8 chrX 32962872 32962992 -133687304 - B1F SINE Alu -1 148 21 4 836 454 289 0 0 chrX 32963052 32963156 -133687140 - B3 SINE B2 -15 201 98 4 836 4625 131 12 19 chrX 32963998 32964795 -133685501 - YREP_Mm Unknown Unknown -35 1777 986 4 836 347 325 115 39 chrX 32964800 32965034 -133685262 - L2 LINE L2 -1119 2300 2049 4 836 219 88 0 0 chrX 32965131 32965165 -133685131 + (CCA)n Simple_repeat Simple_repeat 1 34 0 4 836 574 320 40 15 chrX 32965211 32965418 -133684878 + B4A SINE B4 83 290 -2 4 836 181 347 52 10 chrX 32965432 32965528 -133684768 - L2 LINE L2 -1394 2025 1926 4 836 231 320 62 37 chrX 32965891 32966053 -133684243 - L2 LINE L2 -1760 1659 1494 4 836 5685 134 12 27 chrX 32967366 32968327 -133681969 - Lx3A LINE L1 -7 6974 6028 4 836 283 303 56 70 chrX 32968791 32969075 -133681221 + RMER17C LTR ERVK 83 362 -48 4 836 791 127 35 21 chrX 32969354 32969499 -133680797 + L1_Mus1 LINE L1 6421 6567 0 4 836 4024 70 0 33 chrX 32969503 32970341 -133679955 - L1Md_A LINE L1 -4124 1759 964 4 836 22878 68 1 1 chrX 32970342 32974067 -133676229 - L1Md_F2 LINE L1 -12 6570 2850 4 836 2683 96 0 2 chrX 32974078 32974473 -133675823 - L1Md_F2 LINE L1 -3513 2370 1977 4 836 3608 167 8 3 chrX 32974471 32975119 -133675177 - L1Md_F2 LINE L1 -5633 1091 441 4 836 234 427 13 37 chrX 32975889 32976188 -133674108 + RMER1C Other Other 426 717 -625 4 836 306 437 20 12 chrX 32976672 32977219 -133673077 + RMER1C Other Other 373 872 -470 4 836 582 385 40 17 chrX 32977711 32978057 -133672239 + RMER1C Other Other 521 874 -468 4 836 289 403 35 22 chrX 32978285 32978516 -133671780 + RMER1C Other Other 504 737 -605 4 836 411 410 34 28 chrX 32978884 32979530 -133670766 + RMER1C Other Other 378 881 -461 4 836 353 383 46 10 chrX 32979664 32979859 -133670437 + RMER1C Other Other 462 663 -679 4 836 307 420 43 51 chrX 32980479 32981020 -133669276 + RMER1C Other Other 378 837 -505 4 836 450 0 0 0 chrX 32981047 32981097 -133669199 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 836 286 432 12 43 chrX 32981535 32981857 -133668439 + RMER1C Other Other 535 846 -496 4 836 413 401 26 19 chrX 32981973 32982237 -133668059 + RMER1C Other Other 464 729 -613 4 836 396 423 43 23 chrX 32982359 32982753 -133667543 + RMER1C Other Other 418 819 -523 4 836 430 379 50 51 chrX 32982813 32983629 -133666667 + RMER1C Other Other 362 884 -458 4 836 10430 185 31 9 chrX 32983732 32986720 -133663576 - Lx4A LINE L1 -279 6779 3720 4 836 3448 173 48 9 chrX 32986727 32987660 -133662636 + Lx3C LINE L1 5353 6316 -660 4 836 1567 195 16 3 chrX 32987662 32987976 -133662320 - Lx2 LINE L1 -857 6140 5823 4 836 21636 187 20 68 chrX 32987989 32994830 -133655466 - L1_Mus1 LINE L1 0 6567 217 5 836 797 177 69 16 chrX 32994867 32995056 -133655240 - L1_Mm LINE L1 -433 5450 5252 5 836 813 283 10 0 chrX 32995199 32995404 -133654892 + B3 SINE B2 1 207 -9 5 836 417 39 0 0 chrX 32995488 32995539 -133654757 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 5 836 627 302 29 68 chrX 32995607 32995813 -133654483 - B3A SINE B2 0 198 1 5 836 662 269 49 35 chrX 32996115 32996400 -133653896 + Lx7 LINE L1 5857 6145 -1551 5 836 1999 262 50 21 chrX 32996426 32997003 -133653293 + Lx7 LINE L1 6061 6654 -1042 5 836 506 133 0 0 chrX 32997267 32997355 -133652941 + RMER3D-int LTR ERVK 489 564 -2278 5 836 552 225 35 40 chrX 32997370 32997569 -133652727 + RMER3D-int LTR ERVK 652 849 -1993 5 836 571 232 29 40 chrX 32997655 32997948 -133652348 + RMER3D-int LTR ERVK 354 804 -2038 5 836 503 184 0 63 chrX 32997966 32998157 -133652139 + GA-rich Low_complexity Low_complexity 2 180 0 5 836 2315 184 85 61 chrX 32998179 32998525 -133651771 + RMER3D-int LTR ERVK 1016 1383 -1459 5 836 3319 38 2 0 chrX 32998525 32998920 -133651376 - MTA_Mm LTR MaLR 0 396 1 5 836 2315 190 88 79 chrX 32998920 32999255 -133651041 + RMER3D-int LTR ERVK 1384 1678 -1164 5 836 2394 198 114 15 chrX 32999278 33000000 -133650296 + MYSERV16_I-int LTR ERVK 1308 2100 -226 5 836 463 225 102 17 chrX 33000023 33000199 -133650097 + RMER3D-int LTR ERVK 2651 2841 -1 1 836 2816 97 19 2 chrX 33000200 33000614 -133649682 + BGLII LTR ERVK 1 421 0 1 836 1119 216 70 52 chrX 33000884 33001284 -133649012 - RLTR21 LTR ERVK -460 1112 706 2 836 12148 84 5 1 chrX 33001284 33003622 -133646674 - L1Md_F2 LINE L1 -12 6570 4225 3 836 9792 114 129 5 chrX 33003604 33004597 -133645699 - L1Md_A LINE L1 -750 3164 1961 4 836 211 71 48 0 chrX 33004597 33004639 -133645657 + (TTG)n Simple_repeat Simple_repeat 2 45 0 5 836 9792 152 69 19 chrX 33004639 33006182 -133644114 - L1Md_A LINE L1 -1954 1960 446 4 836 621 191 17 51 chrX 33006185 33006362 -133643934 - RLTR21 LTR ERVK -855 717 547 2 836 234 0 0 0 chrX 33006370 33006396 -133643900 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 6 836 1374 215 24 40 chrX 33006413 33006742 -133643554 - RLTR21 LTR ERVK -1248 324 1 2 836 257 307 0 17 chrX 33007138 33007254 -133643042 - Lx6 LINE L1 -15 7445 7332 7 836 464 317 26 18 chrX 33007254 33007482 -133642814 - Lx6 LINE L1 -1326 6134 5905 7 836 1924 201 17 15 chrX 33007488 33007897 -133642399 - MTC LTR MaLR 0 421 12 8 836 1286 218 14 21 chrX 33007907 33008197 -133642099 - Lx7 LINE L1 -1792 5904 5617 9 836 1127 203 28 3 chrX 33008212 33008494 -133641802 - L1_Mur3 LINE L1 -2593 3287 2999 1 836 3574 156 18 23 chrX 33008495 33009026 -133641270 - L1_Mus3 LINE L1 -8 6630 6101 1 836 2774 67 0 0 chrX 33009026 33009368 -133640928 - ORR1A1 LTR MaLR -4 342 1 1 836 3574 156 18 23 chrX 33009368 33009492 -133640804 - L1_Mus3 LINE L1 -538 6100 5978 1 836 2484 61 3 3 chrX 33009493 33009806 -133640490 + L1Md_F2 LINE L1 5274 5586 -297 1 836 7291 78 6 15 chrX 33009807 33010809 -133639487 + L1Md_F2 LINE L1 5588 6580 -2 1 836 1379 309 37 43 chrX 33010821 33011361 -133638935 - RodERV21-int LTR ERV1 -3339 1652 1116 1 836 318 277 58 65 chrX 33011502 33011641 -133638655 - RodERV21-int LTR ERV1 -3961 1030 893 1 836 209 169 49 33 chrX 33012680 33012741 -133637555 + GA-rich Low_complexity Low_complexity 2 63 0 1 836 479 220 25 62 chrX 33012906 33013066 -133637230 - L1_Rod LINE L1 -313 5534 5381 1 836 2021 218 65 29 chrX 33013066 33013620 -133636676 + RLTR31A_Mm LTR ERVK 11 584 0 1 836 258 196 107 10 chrX 33013620 33013723 -133636573 - L1_Rod LINE L1 -475 5372 5260 1 836 799 142 7 47 chrX 33013867 33014015 -133636281 - B1_Mus1 SINE Alu 0 148 7 1 836 307 250 30 30 chrX 33014263 33014362 -133635934 - RMER17C-int LTR ERVK -2 3236 3138 1 836 3601 317 42 48 chrX 33014430 33014721 -133635575 - RodERV21-int LTR ERV1 -198 4793 4501 2 836 2461 123 35 54 chrX 33014721 33015149 -133635147 - RLTR9B2 LTR ERVK 0 420 1 2 836 3601 317 42 48 chrX 33015149 33016758 -133633538 - RodERV21-int LTR ERV1 -491 4500 2905 2 836 3373 74 20 16 chrX 33016873 33017367 -133632929 + LTRIS2 LTR ERV1 69 564 0 2 836 730 75 0 0 chrX 33017594 33017687 -133632609 + RLTR1B-int LTR ERV1 201 293 -3006 2 836 957 126 90 17 chrX 33018031 33018209 -133632087 + RMER16-int LTR ERVK 141 331 -5075 2 836 4119 152 52 18 chrX 33018195 33018900 -133631396 + RMER16-int LTR ERVK 690 1418 -3988 2 836 2653 201 112 40 chrX 33018904 33019797 -133630499 + RLTR1B-int LTR ERV1 835 1796 -3267 2 836 183 42 0 0 chrX 33019797 33019821 -133630475 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 836 5273 84 156 89 chrX 33019821 33021062 -133629234 + RLTR1B-int LTR ERV1 1259 2555 -744 2 836 1126 152 58 5 chrX 33021049 33021310 -133628986 + RLTR1B-int LTR ERV1 2669 2813 -486 2 836 1089 167 54 25 chrX 33021536 33021776 -133628520 + RLTR1B-int LTR ERV1 4791 5037 -26 2 836 3465 64 20 12 chrX 33021776 33022268 -133628028 + LTRIS2 LTR ERV1 69 564 0 2 836 1163 273 3 7 chrX 33022742 33023052 -133627244 - MuRRS4-int LTR ERV1 -118 4945 4637 2 836 751 196 0 7 chrX 33023052 33023201 -133627095 - RLTR1B-int LTR ERV1 -128 4935 4788 2 836 8310 136 36 82 chrX 33023192 33025498 -133624798 - RLTR1B-int LTR ERV1 -792 4271 1104 2 836 1473 272 33 7 chrX 33025520 33025942 -133624354 - MuRRS4-int LTR ERV1 -3619 1444 1012 2 836 678 280 8 66 chrX 33026091 33026347 -133623949 + LSU-rRNA_Hsa rRNA rRNA 3424 3664 -1371 3 836 604 154 92 17 chrX 33026347 33026466 -133623830 - MuRRS4-int LTR ERV1 -4186 877 750 2 836 361 223 10 69 chrX 33026450 33026551 -133623745 - RMER16-int LTR ERVK -3958 1448 1354 3 836 4341 136 17 10 chrX 33026656 33027348 -133622948 - RMER16-int LTR ERVK -4045 1361 665 3 836 815 277 26 5 chrX 33027373 33027687 -133622609 - MuRRS4-int LTR ERV1 -3710 980 374 3 836 729 246 51 77 chrX 33028023 33028574 -133621722 - MuRRS4-int LTR ERV1 -4565 498 5 3 836 542 236 96 29 chrX 33028576 33028785 -133621511 - LTRIS4 LTR ERV1 0 507 285 3 836 435 357 25 42 chrX 33029614 33030093 -133620203 - RodERV21-int LTR ERV1 -3035 4056 3586 3 837 1340 281 14 49 chrX 33030219 33030649 -133619647 - RodERV21-int LTR ERV1 -2273 2718 2304 3 837 4496 99 31 11 chrX 33030654 33031320 -133618976 - L1_Mus3 LINE L1 -247 6391 5712 3 837 1515 142 0 0 chrX 33031322 33031548 -133618748 + L1_Mus3 LINE L1 5473 5698 -185 3 837 1554 193 12 21 chrX 33031548 33031876 -133618420 - RLTR14 LTR ERV1 -51 331 7 3 837 499 194 0 11 chrX 33031901 33031995 -133618301 - RLTR14-int LTR ERV1 -5 5312 5220 3 837 8680 194 58 24 chrX 33032018 33033873 -133616423 - RLTR14-int LTR ERV1 -205 5112 3195 3 837 1079 179 188 55 chrX 33033873 33034234 -133616062 + RLTR9E LTR ERVK 1 409 0 3 837 690 225 11 56 chrX 33034236 33034499 -133615797 + MMETn-int LTR ERVK 2 317 -2997 3 837 347 146 0 18 chrX 33034554 33034610 -133615686 + RLTR45-int LTR ERVK 2091 2145 -5099 3 837 255 204 0 0 chrX 33035044 33035098 -133615198 + RMER16-int LTR ERVK 141 194 -5212 3 837 1794 208 61 17 chrX 33035077 33035552 -133614744 + ETnERV2-int LTR ERVK 1590 2085 -5321 4 837 2858 170 43 30 chrX 33035576 33036226 -133614070 + ETnERV2-int LTR ERVK 1934 3135 -4271 4 837 7743 77 1 0 chrX 33036227 33037282 -133613014 - L1Md_F2 LINE L1 -14 6568 5513 4 837 845 153 12 58 chrX 33037290 33037463 -133612833 + ETnERV2-int LTR ERVK 2026 2190 -2654 4 837 2551 124 61 5 chrX 33037688 33038100 -133612196 + ETnERV2-int LTR ERVK 3441 3875 -3531 4 837 25621 5 0 0 chrX 33038100 33041631 -133608665 - L1Md_A LINE L1 0 6582 3052 4 837 1548 20 0 61 chrX 33041631 33041868 -133608428 - L1Md_F2 LINE L1 0 6582 6382 4 837 336 45 0 0 chrX 33041868 33041888 -133608408 + (T)n Simple_repeat Simple_repeat 1 20 0 4 837 41420 19 0 2 chrX 33041888 33048896 -133601400 - L1Md_T LINE L1 0 6582 1 4 837 1460 149 29 9 chrX 33048899 33049175 -133601121 + ETnERV2-int LTR ERVK 3863 4088 -3318 4 837 803 198 73 32 chrX 33049174 33049420 -133600876 + MMETn-int LTR ERVK 4694 4949 -2295 4 837 20237 77 3 6 chrX 33049447 33052894 -133597402 - L1Md_F2 LINE L1 -12 6570 3137 4 837 7326 95 15 16 chrX 33052886 33054378 -133595918 - L1Md_F2 LINE L1 -4207 1676 187 4 837 834 247 33 133 chrX 33054433 33054529 -133595767 + MMETn-int LTR ERVK 5037 5122 -2122 4 837 4729 70 0 5 chrX 33054529 33055135 -133595161 + L1Md_F2 LINE L1 5966 6568 -14 4 837 3225 181 16 41 chrX 33055135 33056072 -133594224 + MMETn-int LTR ERVK 2541 3719 -1125 4 837 779 195 0 0 chrX 33056067 33056190 -133594106 + MMETn-int LTR ERVK 6539 6661 -745 4 837 3211 199 44 25 chrX 33056221 33056348 -133593948 - RLTR14-int LTR ERV1 -2117 3200 3078 5 837 4159 61 2 8 chrX 33056348 33056863 -133593433 + LTRIS3 LTR ERV1 1 512 0 5 837 3211 199 44 25 chrX 33056863 33057486 -133592810 - RLTR14-int LTR ERV1 -2240 3077 2436 5 837 2051 242 127 43 chrX 33058940 33059452 -133590844 + RLTR40 LTR ERVK 22 552 -265 5 837 818 83 8 0 chrX 33059452 33059572 -133590724 + (GA)n Simple_repeat Simple_repeat 2 122 0 5 837 2051 242 127 43 chrX 33059572 33059731 -133590565 + RLTR40 LTR ERVK 553 751 -66 5 837 6441 85 24 5 chrX 33059731 33060607 -133589689 - RLTR13B1 LTR ERVK 0 893 1 5 837 2051 242 127 43 chrX 33060607 33060669 -133589627 + RLTR40 LTR ERVK 752 816 -1 5 837 1363 51 0 6 chrX 33060879 33061197 -133589099 + (GAA)n Simple_repeat Simple_repeat 1 315 0 5 837 588 250 68 11 chrX 33062746 33062936 -133587360 - Lx9 LINE L1 -243 7401 7201 5 837 400 191 0 0 chrX 33062936 33063020 -133587276 + Lx9 LINE L1 7554 7637 -7 5 837 503 291 7 0 chrX 33063029 33063177 -133587119 + Lx5 LINE L1 6825 6973 -77 5 837 387 0 0 0 chrX 33063187 33063230 -133587066 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 5 837 652 210 35 14 chrX 33063245 33063390 -133586906 + B1_Mur3 SINE Alu 1 148 -1 6 837 2043 131 36 0 chrX 33063419 33063754 -133586542 + L1_Mus3 LINE L1 6284 6630 -8 6 837 32 43 0 0 chrX 33063767 33063813 -133586483 + AT_rich Low_complexity Low_complexity 1 46 0 6 837 203 173 0 88 chrX 33063879 33063936 -133586360 + A-rich Low_complexity Low_complexity 4 55 0 6 837 715 256 19 14 chrX 33063944 33064158 -133586138 + Lx4B LINE L1 6809 7023 -35 6 837 2781 173 32 2 chrX 33064194 33064786 -133585510 - L1_Mur2 LINE L1 -1176 4701 4092 6 837 9972 141 42 26 chrX 33064786 33066156 -133584140 - RLTR22_Mur LTR ERVK 0 1848 461 6 837 415 82 0 27 chrX 33066156 33066231 -133584065 + (TAG)n Simple_repeat Simple_repeat 3 75 0 6 837 9972 141 42 26 chrX 33066231 33066678 -133583618 - RLTR22_Mur LTR ERVK -1388 460 3 6 837 1146 188 24 21 chrX 33066678 33066966 -133583330 - L1_Mur2 LINE L1 -1782 4095 3807 6 837 1393 141 16 4 chrX 33067010 33067253 -133583043 + L1_Mus4 LINE L1 6391 6636 0 6 837 180 0 0 0 chrX 33067741 33067761 -133582535 + (CAAAG)n Simple_repeat Simple_repeat 3 22 0 6 837 320 276 22 7 chrX 33069455 33069590 -133580706 + L1_Mur2 LINE L1 4334 4470 -1407 7 837 828 325 168 9 chrX 33069595 33070030 -133580266 + Lx6 LINE L1 6793 7296 -164 7 837 1414 199 20 90 chrX 33070007 33070461 -133579835 - L1_Mur2 LINE L1 -2136 3741 3320 6 837 1159 70 6 0 chrX 33070464 33070621 -133579675 - L1_Mus1 LINE L1 0 6567 6410 7 837 20963 121 6 3 chrX 33070621 33073613 -133576683 - L1_Mus1 LINE L1 -431 6136 3134 7 837 210 37 0 0 chrX 33073613 33073640 -133576656 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 837 20963 133 7 4 chrX 33073640 33074478 -133575818 - L1_Mus1 LINE L1 -2750 3133 2295 7 837 1304 179 52 0 chrX 33074479 33074730 -133575566 + L1VL1 LINE L1 3 266 -6156 7 837 29202 110 16 9 chrX 33074730 33077881 -133572415 + L1Md_F2 LINE L1 277 3452 -2431 7 837 1189 89 67 0 chrX 33077881 33078061 -133572235 + B2_Mm2 SINE B2 4 195 0 7 837 29202 89 5 4 chrX 33078061 33080194 -133570102 + L1Md_F2 LINE L1 3453 5585 -298 7 837 7967 52 1 2 chrX 33080195 33081191 -133569105 + L1Md_F2 LINE L1 5587 6581 -1 7 837 707 221 143 24 chrX 33081213 33081541 -133568755 - ETnERV2-int LTR ERVK -2293 4951 4585 7 837 3691 128 34 3 chrX 33081518 33082144 -133568152 - ETnERV2-int LTR ERVK -3321 4085 3441 7 837 742 159 12 58 chrX 33082369 33082542 -133567754 - MMETn-int LTR ERVK -2654 2190 2026 7 837 569 68 0 0 chrX 33082550 33082623 -133567673 + L1Md_F2 LINE L1 5513 5585 -298 7 837 7554 66 16 0 chrX 33082624 33083591 -133566705 + L1Md_F2 LINE L1 5587 6568 -14 7 837 2251 198 72 27 chrX 33083622 33084223 -133566073 - ETnERV2-int LTR ERVK -4283 3123 2496 7 837 1757 173 65 12 chrX 33084247 33084663 -133565633 - ETnERV2-int LTR ERVK -5321 2085 1648 7 837 25125 60 1 25 chrX 33084691 33088899 -133561397 + L1Md_F LINE L1 389 4493 -1390 8 837 5270 38 2 0 chrX 33088899 33089529 -133560767 + L1Md_A LINE L1 5952 6582 0 8 837 268 167 0 0 chrX 33089545 33089599 -133560697 - RMER16-int LTR ERVK -5212 194 141 8 837 322 151 0 0 chrX 33090034 33090087 -133560209 - RLTR45-int LTR ERVK -5099 2145 2093 8 837 536 232 12 58 chrX 33090124 33090363 -133559933 - MMETn-int LTR ERVK -2997 317 25 8 837 181 321 59 59 chrX 33090363 33090389 -133559907 + L2 LINE L2 2817 2843 -576 8 837 1154 164 190 48 chrX 33090389 33090747 -133559549 - RLTR9E LTR ERVK 0 409 1 8 837 181 321 59 59 chrX 33090747 33090839 -133559457 + L2 LINE L2 2844 2935 -484 8 837 6979 194 75 29 chrX 33090840 33092514 -133557782 + RLTR14-int LTR ERV1 3296 5023 -294 8 837 198 0 0 0 chrX 33092514 33092536 -133557760 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 8 837 6979 194 75 29 chrX 33092536 33092598 -133557698 + RLTR14-int LTR ERV1 5024 5111 -206 8 837 487 183 0 11 chrX 33092621 33092715 -133557581 + RLTR14-int LTR ERV1 5220 5312 -5 8 837 1660 184 12 21 chrX 33092740 33093068 -133557228 + RLTR14 LTR ERV1 7 331 -51 8 837 1291 156 4 4 chrX 33093068 33093294 -133557002 - L1_Mus3 LINE L1 -185 5698 5473 8 837 4229 96 35 1 chrX 33093296 33093954 -133556342 + L1_Mus3 LINE L1 5712 6391 -247 8 837 1263 276 21 56 chrX 33093959 33094389 -133555907 + RodERV21-int LTR ERV1 2304 2718 -2273 8 837 400 341 29 46 chrX 33094516 33094995 -133555301 + RodERV21-int LTR ERV1 3586 4056 -3035 8 837 342 100 0 0 chrX 33095149 33095209 -133555087 + (T)n Simple_repeat Simple_repeat 1 60 0 9 837 653 264 94 40 chrX 33095805 33096081 -133554215 + LTRIS4 LTR ERV1 217 507 0 9 837 800 254 38 124 chrX 33096083 33096617 -133553679 + MuRRS4-int LTR ERV1 5 492 -4571 9 837 901 238 35 11 chrX 33096952 33097302 -133552994 + MuRRS4-int LTR ERV1 374 744 -6708 9 837 4001 134 19 6 chrX 33097314 33097989 -133552307 + RMER16-int LTR ERVK 678 1361 -4045 9 837 402 163 19 90 chrX 33098073 33098189 -133552107 + RMER16-int LTR ERVK 1354 1446 -3960 9 837 559 162 92 17 chrX 33098175 33098294 -133552002 + MuRRS4-int LTR ERV1 750 877 -4186 9 837 583 279 16 78 chrX 33098294 33098551 -133551745 - LSU-rRNA_Hsa rRNA rRNA -1371 3664 3424 9 837 574 298 47 8 chrX 33098588 33098845 -133551451 + MuRRS4-int LTR ERV1 1178 1444 -3619 9 837 270 0 0 0 chrX 33098906 33098936 -133551360 + (GA)n Simple_repeat Simple_repeat 1 30 0 9 837 7396 137 35 84 chrX 33098936 33101210 -133549086 + RLTR1B-int LTR ERV1 1139 4271 -792 9 837 657 223 0 6 chrX 33101201 33101359 -133548937 + RLTR1B-int LTR ERV1 4788 4944 -119 9 837 919 290 0 7 chrX 33101350 33101652 -133548644 + MuRRS4-int LTR ERV1 4636 4935 -128 9 837 2859 336 33 37 chrX 33102233 33103838 -133546458 + RodERV21-int LTR ERV1 2905 4500 -491 9 837 2510 123 35 56 chrX 33103838 33104267 -133546029 + RLTR9B2 LTR ERVK 1 420 0 9 837 2859 336 33 37 chrX 33104267 33104558 -133545738 + RodERV21-int LTR ERV1 4501 4793 -198 9 837 833 152 13 46 chrX 33105002 33105154 -133545142 + B1_Mus1 SINE Alu 2 148 0 1 837 2248 212 67 29 chrX 33105403 33105956 -133544340 - RLTR31A_Mm LTR ERVK 0 584 11 1 837 368 248 30 40 chrX 33105975 33106125 -133544171 + L1_Rod LINE L1 5396 5580 -306 1 837 1594 168 7 10 chrX 33106490 33106790 -133543506 + L1_Mus3 LINE L1 6333 6631 -7 1 837 1025 199 28 3 chrX 33106791 33107073 -133543223 + L1_Mur3 LINE L1 2999 3287 -2593 1 837 1138 232 17 17 chrX 33107080 33107378 -133542918 + Lx7 LINE L1 5607 5904 -1792 1 837 2114 199 17 15 chrX 33107388 33107797 -133542499 + MTC LTR MaLR 12 421 0 1 837 389 321 26 18 chrX 33107803 33108031 -133542265 + Lx6 LINE L1 5905 6134 -1326 1 837 1497 223 18 39 chrX 33108543 33108874 -133541422 + RLTR21 LTR ERVK 1 324 -1248 1 837 23 0 0 0 chrX 33108891 33108914 -133541382 + AT_rich Low_complexity Low_complexity 1 23 0 1 837 796 155 17 51 chrX 33108921 33109098 -133541198 + RLTR21 LTR ERVK 547 717 -855 1 837 7057 124 110 21 chrX 33109101 33111687 -133538609 + L1Md_F2 LINE L1 446 3165 -2718 1 837 9505 84 1 2 chrX 33111669 33113032 -133537264 + L1Md_F2 LINE L1 4225 5586 -297 1 837 7204 85 9 0 chrX 33113032 33114007 -133536289 + L1Md_F2 LINE L1 5587 6570 -12 1 837 1290 211 70 52 chrX 33114008 33114408 -133535888 + RLTR21 LTR ERVK 706 1112 -460 1 837 2852 98 7 2 chrX 33114678 33115097 -133535199 - BGLII LTR ERVK 0 421 1 1 837 2576 220 45 51 chrX 33115098 33116019 -133534277 - RMER3D-int LTR ERVK -1 2841 1927 1 837 2218 185 88 83 chrX 33116025 33116375 -133533921 - RMER3D-int LTR ERVK -1152 1690 1384 1 837 3256 48 2 0 chrX 33116375 33116770 -133533526 + MTA_Mm LTR MaLR 1 396 0 1 837 2218 185 88 83 chrX 33116770 33117091 -133533205 - RMER3D-int LTR ERVK -1459 1383 1016 1 837 503 184 0 63 chrX 33117138 33117329 -133532967 + CT-rich Low_complexity Low_complexity 2 180 0 1 837 435 165 13 0 chrX 33117342 33117421 -133532875 - RMER3D-int LTR ERVK -2274 568 489 1 837 449 218 52 39 chrX 33117481 33117634 -133532662 - RMER3D-int LTR ERVK -2038 804 650 1 837 535 223 25 40 chrX 33117720 33117921 -133532375 - RMER3D-int LTR ERVK -1993 849 652 1 837 503 125 0 0 chrX 33117936 33118024 -133532272 - RMER3D-int LTR ERVK -2278 564 489 1 837 1673 266 52 20 chrX 33118260 33118868 -133531428 - Lx7 LINE L1 -794 6666 6061 1 837 638 258 51 29 chrX 33118904 33119179 -133531117 - Lx7 LINE L1 -1559 6137 5857 1 837 540 311 51 6 chrX 33119481 33119659 -133530637 + B3A SINE B2 1 186 -12 1 837 540 45 0 0 chrX 33119755 33119822 -133530474 + (GGAA)n Simple_repeat Simple_repeat 4 70 0 1 837 849 273 10 0 chrX 33119906 33120111 -133530185 - B3 SINE B2 -9 207 1 1 837 728 182 68 16 chrX 33120254 33120444 -133529852 + L1_Mm LINE L1 5252 5451 -432 1 837 2109 229 68 58 chrX 33120490 33121607 -133528689 + L1_Mus1 LINE L1 273 1205 -5433 1 837 25990 126 7 38 chrX 33121604 33127322 -133522974 + L1_Mus1 LINE L1 1071 6567 0 1 837 4240 169 20 4 chrX 33127334 33128143 -133522153 + Lx2 LINE L1 5822 6643 -354 1 837 1198 185 5 0 chrX 33128143 33128359 -133521937 + Lx2 LINE L1 6775 6991 -6 1 837 349 227 0 13 chrX 33128651 33128727 -133521569 - ID_B1 SINE B4 -2 222 148 1 837 600 101 0 0 chrX 33128730 33128819 -133521477 + (TA)n Simple_repeat Simple_repeat 2 90 0 1 837 271 281 56 46 chrX 33128819 33128847 -133521449 - B1F SINE Alu -85 64 39 1 837 5926 184 40 11 chrX 33128847 33130387 -133519909 - Lx3C LINE L1 -40 6936 5353 1 837 10155 181 27 11 chrX 33130399 33133396 -133516900 + Lx4A LINE L1 3725 6779 -279 1 837 244 430 18 4 chrX 33133689 33133941 -133516355 - RMER1C Other Other -614 728 495 1 837 276 407 30 19 chrX 33134153 33134416 -133515880 - RMER1C Other Other -613 729 464 1 837 258 435 4 9 chrX 33134638 33134870 -133515426 - RMER1C Other Other -559 783 553 1 837 296 387 19 13 chrX 33135539 33135696 -133514600 - RMER1C Other Other -691 651 494 1 837 251 428 23 17 chrX 33136634 33136981 -133513315 - RMER1C Other Other -507 835 487 1 837 207 88 0 0 chrX 33137565 33137599 -133512697 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 1 837 30233 86 13 19 chrX 33138795 33144185 -133506111 + L1Md_T LINE L1 233 5586 -297 1 837 8238 37 5 0 chrX 33144185 33145175 -133505121 + L1Md_T LINE L1 5587 6581 -1 1 837 3549 137 18 24 chrX 33145175 33145805 -133504491 - YREP_Mm Unknown Unknown -128 1684 1059 1 837 4621 121 24 11 chrX 33145805 33146590 -133503706 - Lx3A LINE L1 -158 6823 6029 1 837 292 304 60 74 chrX 33147048 33147332 -133502964 + RMER17C LTR ERVK 83 362 -48 1 837 851 127 7 14 chrX 33147616 33147760 -133502536 + L1Md_F2 LINE L1 6428 6570 -12 1 837 4472 130 26 14 chrX 33147764 33149228 -133501068 - L1Md_F LINE L1 -4124 1759 277 1 837 1262 191 52 0 chrX 33149228 33149479 -133500817 - L1VL1 LINE L1 -6156 266 3 1 837 13118 141 9 0 chrX 33149475 33150313 -133499983 + L1_Mm LINE L1 2287 3132 -2751 1 837 207 0 0 0 chrX 33150313 33150336 -133499960 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 837 13118 141 9 0 chrX 33150336 33151829 -133498467 + L1_Mm LINE L1 3133 4638 -1245 1 837 1365 78 0 0 chrX 33151821 33152013 -133498283 + L1_Mus1 LINE L1 5945 6136 -431 1 837 1132 95 0 0 chrX 33152013 33152171 -133498125 + L1_Mus1 LINE L1 6410 6567 0 1 837 1408 191 24 90 chrX 33152173 33152628 -133497668 + L1_Mur2 LINE L1 3320 3744 -2133 1 837 812 300 46 26 chrX 33152602 33153037 -133497259 - Lx6 LINE L1 -164 7296 6506 1 837 358 261 22 7 chrX 33153042 33153177 -133497119 - L1_Mur2 LINE L1 -1407 4470 4334 1 837 24 0 0 0 chrX 33153462 33153486 -133496810 + AT_rich Low_complexity Low_complexity 1 24 0 1 837 180 0 0 0 chrX 33154878 33154898 -133495398 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 1 837 1384 138 25 4 chrX 33155387 33155628 -133494668 - L1_Mus4 LINE L1 0 6636 6391 1 837 790 157 194 0 chrX 33155672 33155914 -133494382 + L1_Mur2 LINE L1 3807 4095 -1782 1 837 10106 142 39 23 chrX 33155914 33156361 -133493935 + RLTR22_Mur LTR ERVK 1 444 -1404 1 837 457 55 0 27 chrX 33156361 33156436 -133493860 + (CTA)n Simple_repeat Simple_repeat 3 75 0 1 837 10106 142 39 23 chrX 33156436 33157806 -133492490 + RLTR22_Mur LTR ERVK 445 1847 -1 1 837 2694 179 32 2 chrX 33157806 33158398 -133491898 + L1_Mur2 LINE L1 4092 4701 -1176 1 837 640 275 19 14 chrX 33158434 33158648 -133491648 - Lx4B LINE L1 -35 7023 6809 1 837 29 47 0 0 chrX 33158776 33158819 -133491477 + AT_rich Low_complexity Low_complexity 1 43 0 1 837 1925 149 36 0 chrX 33158832 33159167 -133491129 - L1_Mus3 LINE L1 -8 6630 6284 1 837 616 215 36 15 chrX 33159197 33159334 -133490962 - B1_Mur2 SINE Alu -5 144 5 1 837 393 22 0 0 chrX 33159350 33159396 -133490900 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1 837 455 300 13 0 chrX 33159404 33159554 -133490742 - Lx5 LINE L1 -74 6976 6825 1 837 400 191 0 0 chrX 33159563 33159647 -133490649 - Lx9 LINE L1 -7 7637 7554 1 837 641 233 60 11 chrX 33159647 33159829 -133490467 + Lx9 LINE L1 7201 7391 -253 1 838 324 0 0 0 chrX 33161382 33161418 -133488878 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1 838 615 284 52 44 chrX 33161609 33161671 -133488625 - RLTR40 LTR ERVK 0 817 753 1 838 6245 91 30 2 chrX 33161671 33162122 -133488174 + RLTR13B1 LTR ERVK 1 469 -424 1 838 342 0 0 0 chrX 33162122 33162160 -133488136 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 838 6245 91 30 2 chrX 33162160 33162577 -133487719 + RLTR13B1 LTR ERVK 470 892 -1 1 838 615 284 52 44 chrX 33162577 33162764 -133487532 - RLTR40 LTR ERVK -65 752 566 1 838 608 143 0 8 chrX 33162764 33162891 -133487405 + CT-rich Low_complexity Low_complexity 2 127 0 1 838 1916 231 53 31 chrX 33162893 33163416 -133486880 - RLTR40 LTR ERVK -261 556 22 1 838 3140 205 50 18 chrX 33164871 33165612 -133484684 + RLTR14-int LTR ERV1 2436 3200 -2117 1 838 696 203 0 0 chrX 33165643 33165766 -133484530 - MMETn-int LTR ERVK -745 6661 6539 1 838 2923 174 16 41 chrX 33165761 33166675 -133483621 - MMETn-int LTR ERVK -1703 3141 2541 1 838 2880 58 0 11 chrX 33166703 33167071 -133483225 - L1Md_F2 LINE L1 -12 6570 6207 1 838 869 44 0 0 chrX 33167071 33167184 -133483112 - L1Md_F2 LINE L1 -504 6078 5966 1 838 372 169 0 6 chrX 33167185 33167277 -133483019 - MMETn-int LTR ERVK -2291 2553 2473 1 838 6554 95 1 6 chrX 33167341 33168277 -133482019 + L1Md_F LINE L1 95 1025 -5494 1 838 397 214 19 37 chrX 33168278 33168385 -133481911 + L1Md_F2 LINE L1 112 216 -6400 1 838 30167 76 1 1 chrX 33168373 33172658 -133477638 + L1Md_F2 LINE L1 1300 5586 -297 1 838 7820 57 4 2 chrX 33172659 33173652 -133476644 + L1Md_F2 LINE L1 5588 6582 0 1 838 222 150 0 0 chrX 33173665 33173705 -133476591 + (A)n Simple_repeat Simple_repeat 1 40 0 1 838 257 425 23 17 chrX 33174424 33174771 -133475525 + RMER1C Other Other 487 835 -507 1 838 397 384 40 25 chrX 33175290 33175723 -133474573 + RMER1C Other Other 385 864 -478 1 838 242 289 11 46 chrX 33176005 33176092 -133474204 + RMER1C Other Other 666 749 -593 1 838 330 420 33 15 chrX 33176456 33177073 -133473223 + RMER1C Other Other 378 833 -509 1 838 274 388 33 30 chrX 33177190 33177396 -133472900 + RMER1C Other Other 462 751 -591 1 838 266 392 43 52 chrX 33178214 33178561 -133471735 + RMER1C Other Other 420 763 -579 1 838 267 429 5 23 chrX 33179037 33179254 -133471042 + RMER1C Other Other 571 783 -559 1 838 318 401 27 15 chrX 33179476 33179739 -133470557 + RMER1C Other Other 464 729 -613 1 838 442 409 16 4 chrX 33180015 33180263 -133470033 + RMER1C Other Other 495 745 -597 1 838 298 359 71 12 chrX 33180737 33180977 -133469319 + RMER1C Other Other 595 848 -494 1 838 9999 182 28 10 chrX 33181241 33184235 -133466061 - Lx4A LINE L1 -279 6779 3725 1 838 5883 193 26 6 chrX 33184247 33185822 -133464474 + Lx3C LINE L1 5353 6964 -12 1 838 372 200 0 13 chrX 33185843 33185919 -133464377 + ID_B1 SINE B4 148 222 -2 1 838 1194 176 5 0 chrX 33186211 33186427 -133463869 - Lx2 LINE L1 -6 6991 6775 1 838 4135 174 20 4 chrX 33186427 33187235 -133463061 - Lx2 LINE L1 -354 6643 5823 1 838 10757 102 7 3 chrX 33187263 33188572 -133461724 - L1_Mus1 LINE L1 -12 6555 5245 1 838 630 0 0 0 chrX 33188572 33188642 -133461654 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 838 10757 131 17 1 chrX 33188642 33189814 -133460482 - L1_Mus1 LINE L1 -639 5244 4046 1 838 12939 7 0 1 chrX 33189802 33191329 -133458967 + L1Md_A LINE L1 4061 5586 -297 1 838 9033 4 0 0 chrX 33191329 33192325 -133457971 + L1Md_A LINE L1 5587 6582 0 1 838 1409 162 0 0 chrX 33192326 33192585 -133457711 - L1_Mus1 LINE L1 -1800 4083 3825 1 838 296 73 0 0 chrX 33192781 33192822 -133457474 - L1_Mus1 LINE L1 -2054 3829 3789 1 838 14205 125 293 7 chrX 33192824 33196951 -133453345 - L1Md_F LINE L1 -299 5584 277 1 838 1202 199 52 0 chrX 33196951 33197202 -133453094 - L1VL1 LINE L1 -6156 266 3 1 838 20282 139 10 7 chrX 33197203 33198036 -133452260 + L1_Mus1 LINE L1 2294 3132 -2751 1 838 243 0 0 0 chrX 33198036 33198063 -133452233 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 838 20282 128 8 6 chrX 33198063 33201063 -133449233 + L1_Mus1 LINE L1 3133 6136 -431 1 838 1196 70 0 0 chrX 33201063 33201221 -133449075 + L1_Mus1 LINE L1 6410 6567 0 1 838 20730 99 20 17 chrX 33201221 33205239 -133445057 + L1VL1 LINE L1 499 4525 -1358 1 838 3118 97 11 0 chrX 33205240 33205268 -133445028 + L1_Mus1 LINE L1 4172 4199 -1684 1 838 189 0 0 0 chrX 33205268 33205289 -133445007 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 838 3118 97 11 0 chrX 33205289 33205733 -133444563 + L1_Mus1 LINE L1 4200 4648 -1235 1 838 806 50 134 0 chrX 33205733 33205852 -133444444 - MT2C_Mm LTR ERVL 0 475 341 1 838 2119 21 6 152 chrX 33205852 33206194 -133444102 + RLTR10B LTR ERVK 1 292 0 1 838 2544 100 31 3 chrX 33206194 33206576 -133443720 + MMERVK10C-int LTR ERVK 1 393 -7188 1 838 38677 51 2 1 chrX 33206580 33211515 -133438781 + MMERVK10C-int LTR ERVK 870 5810 -1771 1 838 6669 68 2 62 chrX 33211501 33212497 -133437799 + MMERVK10C-int LTR ERVK 6646 7581 0 1 838 277 56 0 0 chrX 33212497 33212533 -133437763 + RLTR10B LTR ERVK 1 36 -256 1 838 2166 35 0 78 chrX 33212533 33212841 -133437455 + RLTR10B LTR ERVK 9 292 0 1 838 2541 74 27 0 chrX 33212841 33213178 -133437118 - MT2C_Mm LTR ERVL -129 346 1 1 838 7027 91 54 20 chrX 33213178 33214994 -133435302 + L1_Mus1 LINE L1 4645 6565 -2 1 838 3137 152 31 41 chrX 33215128 33215560 -133434736 - RLTR22_Mur LTR ERVK -1239 609 185 1 838 1125 69 14 0 chrX 33215560 33215705 -133434591 - B1_Mus1 SINE Alu 0 148 2 2 838 3137 152 31 41 chrX 33215705 33215887 -133434409 - RLTR22_Mur LTR ERVK -1664 184 1 1 838 696 197 0 0 chrX 33215887 33216034 -133434262 - L1_Mur2 LINE L1 -1782 4095 3949 2 838 1195 124 0 0 chrX 33216046 33216223 -133434073 + BGLII LTR ERVK 245 421 0 2 838 426 270 14 43 chrX 33216608 33216817 -133433479 + RMER3D-int LTR ERVK 652 854 -1988 2 838 502 188 43 0 chrX 33216947 33217064 -133433232 + MMETn-int LTR ERVK 489 610 -2232 2 838 1546 195 112 15 chrX 33217088 33217559 -133432737 + MMETn-int LTR ERVK 1017 1533 -1309 2 838 478 196 105 59 chrX 33217591 33217743 -133432553 + MMETn-int LTR ERVK 1532 1690 -1152 2 838 1010 136 0 0 chrX 33217744 33217891 -133432405 + B1_Mus2 SINE Alu 1 147 0 2 838 1520 194 35 53 chrX 33217911 33218364 -133431932 + MMETn-int LTR ERVK 1926 2370 -472 2 838 1214 171 24 12 chrX 33218991 33219240 -133431056 - Lx2 LINE L1 -3 6994 6743 2 838 189 0 0 0 chrX 33219387 33219408 -133430888 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 2 838 388 368 0 9 chrX 33219934 33220049 -133430247 - PB1 SINE Alu -2 125 12 2 838 819 160 76 0 chrX 33220203 33220347 -133429949 + ORR1C2 LTR MaLR 230 384 0 2 838 13466 110 27 14 chrX 33220439 33223242 -133427054 + L1Md_F LINE L1 217 3066 -2817 2 838 291 294 46 61 chrX 33223244 33223440 -133426856 - RLTR46 LTR ERVK -2 318 126 2 838 2805 111 17 5 chrX 33223569 33223978 -133426318 - IAPEY3-int LTR ERVK 0 7680 7267 2 838 2804 41 3 0 chrX 33223978 33224323 -133425973 - MTA_Mm LTR MaLR 0 396 51 2 838 2955 188 15 41 chrX 33224323 33225211 -133425085 + MMETn-int LTR ERVK 2568 3719 -1125 2 838 751 203 0 0 chrX 33225206 33225329 -133424967 + MMETn-int LTR ERVK 6539 6661 -745 2 838 3396 204 56 18 chrX 33225360 33226097 -133424199 - RLTR14-int LTR ERV1 -2117 3200 2436 2 838 2075 239 127 38 chrX 33227552 33228065 -133422231 + RLTR40 LTR ERVK 22 571 -246 2 838 976 114 6 6 chrX 33228065 33228242 -133422054 + (GA)n Simple_repeat Simple_repeat 2 178 0 2 838 2075 239 127 38 chrX 33228242 33228396 -133421900 + RLTR40 LTR ERVK 572 752 -65 2 838 6719 87 32 2 chrX 33228396 33228813 -133421483 - RLTR13B1 LTR ERVK 0 893 476 2 838 414 0 0 0 chrX 33228813 33228859 -133421437 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 838 6719 87 32 2 chrX 33228859 33229308 -133420988 - RLTR13B1 LTR ERVK -418 475 3 2 838 2075 239 127 38 chrX 33229308 33229370 -133420926 + RLTR40 LTR ERVK 753 817 0 2 838 429 20 0 0 chrX 33229560 33229610 -133420686 + (TAA)n Simple_repeat Simple_repeat 2 51 0 2 838 739 222 60 11 chrX 33231151 33231333 -133418963 - Lx9 LINE L1 -253 7391 7201 2 838 416 202 0 0 chrX 33231333 33231417 -133418879 + Lx9 LINE L1 7554 7637 -7 2 838 518 300 13 0 chrX 33231426 33231576 -133418720 + Lx5 LINE L1 6825 6976 -74 2 838 393 22 0 0 chrX 33231584 33231630 -133418666 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 2 838 627 225 35 21 chrX 33231642 33231787 -133418509 + B1_Mur2 SINE Alu 1 147 -2 2 838 2202 150 31 0 chrX 33231795 33232154 -133418142 + L1_Mus3 LINE L1 6261 6630 -8 2 838 29 47 0 0 chrX 33232167 33232210 -133418086 + AT_rich Low_complexity Low_complexity 1 43 0 2 838 219 196 18 18 chrX 33232276 33232333 -133417963 + A-rich Low_complexity Low_complexity 4 60 0 2 838 762 261 19 14 chrX 33232342 33232556 -133417740 + Lx4B LINE L1 6809 7023 -35 2 838 3049 174 32 2 chrX 33232592 33233184 -133417112 - L1_Mur2 LINE L1 -1176 4701 4092 2 838 10042 138 41 24 chrX 33233184 33234554 -133415742 - RLTR22_Mur LTR ERVK 0 1848 461 2 838 400 105 0 26 chrX 33234554 33234632 -133415664 + (TAG)n Simple_repeat Simple_repeat 3 78 0 2 838 10042 138 41 24 chrX 33234632 33235079 -133415217 - RLTR22_Mur LTR ERVK -1388 460 3 2 838 1235 210 17 14 chrX 33235079 33235369 -133414927 - L1_Mur2 LINE L1 -1782 4095 3805 2 838 1520 136 12 4 chrX 33235411 33235655 -133414641 + L1_Mus4 LINE L1 6391 6636 0 2 838 225 0 0 0 chrX 33236126 33236151 -133414145 + (CAAAG)n Simple_repeat Simple_repeat 3 27 0 2 838 454 246 22 7 chrX 33237847 33237982 -133412314 + L1_Mur2 LINE L1 4334 4470 -1407 2 838 978 322 168 9 chrX 33237987 33238422 -133411874 + Lx6 LINE L1 6793 7296 -164 2 838 1644 195 18 90 chrX 33238397 33238854 -133411442 - L1_Mur2 LINE L1 -2134 3743 3320 2 838 1223 70 6 0 chrX 33238855 33239012 -133411284 - L1_Mus1 LINE L1 0 6567 6410 2 838 6300 99 6 6 chrX 33239012 33240240 -133410056 - L1_Mus1 LINE L1 -431 6136 4908 2 838 6235 89 4 4 chrX 33240237 33241074 -133409222 + L1_Mus1 LINE L1 5731 6567 0 2 838 4639 178 44 3 chrX 33241081 33242108 -133408188 + Lx2 LINE L1 5813 6983 -17 2 838 258 103 0 0 chrX 33242076 33242115 -133408181 + L1_Mus2 LINE L1 6522 6560 -6 2 838 377 227 40 20 chrX 33242407 33242506 -133407790 - ID_B1 SINE B4 -2 222 122 2 838 6767 174 28 6 chrX 33242506 33244040 -133406256 - Lx3C LINE L1 -52 6924 5353 2 838 1129 145 0 0 chrX 33244052 33244231 -133406065 + L1_Mur2 LINE L1 3725 3903 -1974 2 838 2807 239 32 45 chrX 33244218 33245088 -133405208 + L1_Mur2 LINE L1 3636 4494 -1383 2 838 822 333 46 48 chrX 33245063 33245517 -133404779 + Lx5 LINE L1 6457 6909 -141 2 838 1788 160 25 114 chrX 33245498 33245815 -133404481 - L1_Mur2 LINE L1 -2134 3743 3472 2 838 288 0 0 0 chrX 33245815 33245847 -133404449 + (ATTG)n Simple_repeat Simple_repeat 2 33 0 2 838 1788 160 25 114 chrX 33245847 33246002 -133404294 - L1_Mur2 LINE L1 -2406 3471 3313 2 838 5608 80 7 3 chrX 33246002 33246705 -133403591 - L1Md_F2 LINE L1 -15 6567 5862 2 838 255 187 117 127 chrX 33246712 33246858 -133403438 - RLTR9B2 LTR ERVK -300 120 1 2 838 228 67 0 0 chrX 33247201 33247231 -133403065 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 838 389 432 16 16 chrX 33247590 33248454 -133401842 + RMER1C Other Other 373 882 -460 2 838 382 368 97 21 chrX 33249062 33249392 -133400904 + RMER1C Other Other 415 769 -573 2 838 409 409 27 27 chrX 33249878 33250310 -133399986 + RMER1C Other Other 420 814 -528 2 838 470 395 13 16 chrX 33250506 33250829 -133399467 + RMER1C Other Other 412 764 -578 2 838 499 402 22 8 chrX 33250948 33251314 -133398982 + RMER1C Other Other 449 819 -523 2 838 357 377 57 33 chrX 33251377 33252020 -133398276 + RMER1C Other Other 364 874 -468 2 838 4757 193 25 16 chrX 33252283 33253226 -133397070 - Lx4A LINE L1 -279 6779 5828 2 838 238 26 51 0 chrX 33253226 33253265 -133397031 + (TTTTTG)n Simple_repeat Simple_repeat 4 44 0 2 838 1260 61 7 0 chrX 33253266 33253413 -133396883 - B1_Mus1 SINE Alu 0 148 1 2 838 276 0 68 0 chrX 33253415 33253459 -133396837 + (TTG)n Simple_repeat Simple_repeat 2 48 0 2 838 6154 154 21 19 chrX 33253460 33254582 -133395714 - Lx4A LINE L1 -40 5837 4713 2 838 2253 160 20 60 chrX 33254582 33254981 -133395315 + RLTR9A2 LTR ERVK 1 383 0 2 838 4604 302 43 32 chrX 33254982 33258101 -133392195 + ETnERV-int LTR ERVK 3 3106 -3061 2 838 5471 158 50 40 chrX 33258101 33259111 -133391185 - RLTR13D2 LTR ERVK 0 1023 3 2 838 4050 302 65 50 chrX 33259111 33259615 -133390681 + ETnERV-int LTR ERVK 3107 3602 -2565 2 838 2175 187 3 0 chrX 33259626 33259974 -133390322 + ETnERV-int LTR ERVK 4483 4831 -2575 2 838 3412 92 117 4 chrX 33259974 33260434 -133389862 + RLTR1B LTR ERV1 1 512 0 2 838 62976 52 3 5 chrX 33260434 33268002 -133382294 + MMERGLN-int LTR ERV1 1 7556 0 2 838 3416 85 117 4 chrX 33268002 33268462 -133381834 + RLTR1B LTR ERV1 1 512 0 2 838 3108 177 0 0 chrX 33268462 33268948 -133381348 + ETnERV-int LTR ERVK 4828 5313 -2093 2 838 22852 23 1 1 chrX 33268948 33272262 -133378034 - L1Md_A LINE L1 -1 6581 3266 2 838 30942 21 2 9 chrX 33272259 33276661 -133373635 - L1Md_A LINE L1 -1099 4784 416 2 838 286 188 15 15 chrX 33276653 33276718 -133373578 - L1_Mur3 LINE L1 -3934 1946 1882 2 838 2724 219 37 9 chrX 33276869 33277946 -133372350 - L1_Mur3 LINE L1 -3986 1894 785 2 838 4102 192 12 15 chrX 33278517 33279742 -133370554 + L1_Mur1 LINE L1 866 2092 -3794 2 838 8643 89 4 4 chrX 33279739 33281058 -133369238 - L1_Mur1 LINE L1 -1849 4037 2719 2 838 1728 55 0 0 chrX 33281066 33281284 -133369012 + L1Md_T LINE L1 6365 6582 0 2 838 717 68 26 0 chrX 33282611 33282728 -133367568 + L1Md_F3 LINE L1 6464 6583 -1 2 838 396 241 35 28 chrX 33282854 33282995 -133367301 - Charlie4a DNA MER1_type -7 501 360 2 838 207 0 0 0 chrX 33283010 33283033 -133367263 + (A)n Simple_repeat Simple_repeat 1 23 0 2 838 324 0 0 0 chrX 33283466 33283502 -133366794 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 838 3060 127 269 9 chrX 33283504 33284280 -133366016 + L1_Mur1 LINE L1 2541 3518 -2359 2 838 789 152 0 0 chrX 33285836 33285974 -133364322 + (CTA)n Simple_repeat Simple_repeat 2 139 0 2 838 3215 31 5 37 chrX 33286169 33286576 -133363720 + MTA_Mm LTR MaLR 3 396 0 2 838 710 105 9 0 chrX 33286576 33286690 -133363606 + (TA)n Simple_repeat Simple_repeat 1 115 0 2 838 416 276 17 18 chrX 33287106 33287296 -133363000 + L1VL1 LINE L1 87 400 -6022 2 838 454 236 43 7 chrX 33287347 33287488 -133362808 + L1Md_F LINE L1 567 712 -5807 2 838 2289 161 18 53 chrX 33287490 33288076 -133362220 + L1Md_F LINE L1 628 1127 -5433 2 838 212 0 36 0 chrX 33288118 33288146 -133362150 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2 838 1161 75 7 0 chrX 33288150 33288297 -133361999 - B1_Mus1 SINE Alu 0 148 1 2 838 2128 168 76 11 chrX 33288327 33288761 -133361535 - MERVL_2A-int LTR ERVL -1174 4587 4126 2 838 1454 189 14 41 chrX 33288761 33289054 -133361242 - ORR1A3-int LTR MaLR -1537 426 142 2 838 1339 159 18 0 chrX 33289049 33289276 -133361020 - ORR1A3-int LTR MaLR -1732 231 1 2 838 929 193 66 24 chrX 33289276 33289488 -133360808 - MT2B2 LTR ERVL 0 584 364 2 838 1077 101 0 22 chrX 33290800 33290982 -133359314 + (TTCC)n Simple_repeat Simple_repeat 2 179 0 2 838 207 69 0 0 chrX 33290982 33291011 -133359285 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 2 839 248 359 8 0 chrX 33295172 33295289 -133355007 + MurSAT1 Satellite Satellite 1 118 -2 2 839 231 343 9 19 chrX 33295476 33295583 -133354713 + MurSAT1 Satellite Satellite 6 111 -9 2 839 267 122 0 0 chrX 33296212 33296261 -133354035 + (GA)n Simple_repeat Simple_repeat 2 50 0 2 839 290 341 0 0 chrX 33296718 33296809 -133353487 + MurSAT1 Satellite Satellite 2 92 -28 2 839 27190 111 34 8 chrX 33297851 33304065 -133346231 + L1_Mus3 LINE L1 329 6636 -2 2 839 246 323 97 69 chrX 33304794 33305010 -133345286 + MIRb SINE MIR 37 258 -10 2 839 213 200 67 0 chrX 33305670 33305715 -133344581 - MIR SINE MIR -101 161 114 2 839 5670 33 0 6 chrX 33305943 33306616 -133343680 - L1Md_T LINE L1 0 6582 5914 2 839 967 138 32 27 chrX 33306621 33306807 -133343489 - B2_Mm2 SINE B2 -8 187 1 2 839 318 282 0 0 chrX 33306827 33306926 -133343370 + MurSAT1 Satellite Satellite 1 99 -3 2 839 308 268 11 11 chrX 33307063 33307150 -133343146 + MurSAT1 Satellite Satellite 3 89 -31 2 839 305 316 17 25 chrX 33307788 33307908 -133342388 + MurSAT1 Satellite Satellite 1 119 -1 2 839 329 295 21 10 chrX 33308818 33308957 -133341339 + MurSAT1 Satellite Satellite 1 140 -6 2 839 257 299 0 0 chrX 33308969 33309036 -133341260 + MurSAT1 Satellite Satellite 7 73 -47 2 839 468 0 0 0 chrX 33309631 33309683 -133340613 + (TTTTG)n Simple_repeat Simple_repeat 3 54 0 2 839 238 314 35 0 chrX 33310044 33310130 -133340166 + MurSAT1 Satellite Satellite 15 103 -17 2 839 4635 73 0 0 chrX 33310344 33310933 -133339363 - L1_Mus1 LINE L1 0 6567 5979 2 839 264 343 5 25 chrX 33312218 33312366 -133337930 + MurSAT1 Satellite Satellite 1 145 -5 2 839 387 300 9 0 chrX 33312420 33312586 -133337710 + MurSAT1 Satellite Satellite 1 167 -2 2 839 388 275 25 25 chrX 33312993 33313169 -133337127 + MurSAT1 Satellite Satellite 1 176 -1 3 839 6878 78 6 19 chrX 33313306 33314450 -133335846 + L1_Mus2 LINE L1 5428 6555 -11 3 839 180 0 0 0 chrX 33314450 33314470 -133335826 + (TAA)n Simple_repeat Simple_repeat 3 22 0 3 839 225 259 46 23 chrX 33314508 33314595 -133335701 + MurSAT1 Satellite Satellite 1 89 -31 3 839 6075 152 20 30 chrX 33315028 33315682 -133334614 - L1VL4 LINE L1 -2238 3648 3017 3 839 1474 50 33 0 chrX 33315682 33315864 -133334432 + B2_Mm2 SINE B2 2 189 -6 3 839 6075 152 20 30 chrX 33315864 33316461 -133333835 - L1VL4 LINE L1 -2870 3016 2409 3 839 2192 198 25 17 chrX 33316460 33316985 -133333311 + L1_Mur1 LINE L1 1881 2409 -3477 3 839 1121 156 0 5 chrX 33316985 33317191 -133333105 + L1_Mur1 LINE L1 4182 4386 -1491 3 839 1958 181 75 6 chrX 33317187 33317749 -133332547 - L1VL4 LINE L1 -2514 1400 798 3 839 27 0 0 0 chrX 33317964 33317991 -133332305 + AT_rich Low_complexity Low_complexity 1 27 0 3 839 1880 304 27 33 chrX 33318002 33318845 -133331451 - Lx5 LINE L1 -731 6729 5675 3 839 1972 208 25 2 chrX 33318860 33319342 -133330954 - L1_Mur2 LINE L1 -3245 2632 2140 3 839 1364 317 23 24 chrX 33319347 33319891 -133330405 - Lx6 LINE L1 -31 7429 6506 3 839 2982 89 58 39 chrX 33319891 33320357 -133329939 - IAPLTR2_Mm LTR ERVK 0 475 1 3 839 1118 279 12 78 chrX 33320357 33320458 -133329838 - Lx6 LINE L1 -545 6505 6478 3 839 515 255 46 23 chrX 33320473 33320690 -133329606 - L1_Mur2 LINE L1 -3715 2165 1944 3 839 1174 188 24 4 chrX 33321050 33321301 -133328995 + Lx2B LINE L1 5888 6143 -857 3 839 1353 246 16 54 chrX 33321365 33321752 -133328544 + Lx2B LINE L1 6616 6987 -13 3 839 1093 110 0 0 chrX 33321799 33321954 -133328342 - Lx2 LINE L1 -146 6851 6697 3 839 504 117 0 11 chrX 33321956 33322051 -133328245 + Lx2B LINE L1 6896 6989 -11 3 839 1190 100 0 6 chrX 33322051 33322232 -133328064 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 839 3637 31 48 15 chrX 33322321 33322781 -133327515 - IAPLTR2_Mm LTR ERVK 0 475 1 3 839 1716 14 19 0 chrX 33322883 33323096 -133327200 - L1Md_F2 LINE L1 -596 5986 5770 3 839 4815 43 5 2 chrX 33323096 33323683 -133326613 + L1Md_F2 LINE L1 5993 6581 -1 3 839 2826 177 92 13 chrX 33324596 33325283 -133325013 - Lx LINE L1 -9 6645 5905 3 839 1216 170 46 4 chrX 33325282 33325542 -133324754 - L1_Mur2 LINE L1 -553 5324 5054 3 839 3986 123 21 0 chrX 33325547 33326157 -133324139 + L1_Mus3 LINE L1 6016 6638 0 3 839 8663 143 84 16 chrX 33326379 33327182 -133323114 - Lx2 LINE L1 -884 6113 5286 3 839 3560 161 24 5 chrX 33327182 33327812 -133322484 - Lx LINE L1 -9 6645 6004 3 839 8663 213 164 45 chrX 33327812 33328440 -133321856 - Lx2 LINE L1 -598 5285 4623 3 839 2926 74 10 8 chrX 33328440 33328835 -133321461 + MTA_Mm LTR MaLR 1 396 0 3 839 8663 213 164 45 chrX 33328835 33331256 -133319040 - Lx2 LINE L1 -1261 4622 1805 3 839 1274 269 46 27 chrX 33331266 33331705 -133318591 - L1VL4 LINE L1 -5674 628 182 3 839 326 282 18 18 chrX 33333855 33333967 -133316329 - Lx9 LINE L1 -390 7254 7143 3 839 7571 76 2 3 chrX 33333963 33335127 -133315169 - L1Md_F2 LINE L1 0 6582 5421 3 839 240 146 188 0 chrX 33335127 33335175 -133315121 - Lx9 LINE L1 -486 7158 7102 3 839 22 56 0 0 chrX 33335250 33335286 -133315010 + AT_rich Low_complexity Low_complexity 1 36 0 3 839 688 299 21 11 chrX 33335304 33335493 -133314803 + RMER30 DNA MER1_type 10 200 -2 3 839 5336 90 21 8 chrX 33335585 33336332 -133313964 - L1_Mus2 LINE L1 -1 6565 5809 3 839 6351 186 67 0 chrX 33336307 33337547 -133312749 - L1_Mur1 LINE L1 -134 5752 4430 3 839 15749 104 10 3 chrX 33337573 33340572 -133309724 - L1_Mus1 LINE L1 0 6567 3550 3 839 229 208 0 0 chrX 33340567 33340615 -133309681 - L1VL1 LINE L1 -6185 237 190 3 839 654 144 9 0 chrX 33340685 33340796 -133309500 - Lx2 LINE L1 -1 6996 6885 3 839 387 0 0 0 chrX 33342705 33342748 -133307548 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 839 2245 197 48 24 chrX 33343373 33343964 -133306332 + RLTR26 LTR ERVK 1 642 0 3 839 281 320 71 32 chrX 33345208 33345363 -133304933 - RLTR25B LTR ERVK 0 1028 868 3 839 432 313 56 81 chrX 33346150 33346470 -133303826 - RLTR25B LTR ERVK -716 312 1 3 839 292 253 13 0 chrX 33346870 33346949 -133303347 - Lx4B LINE L1 -169 6889 6810 3 839 875 139 15 0 chrX 33347012 33347149 -133303147 - B1_Mm SINE Alu 0 147 9 3 839 636 227 119 15 chrX 33347169 33347370 -133302926 - Lx5 LINE L1 0 7050 6829 3 839 391 217 0 0 chrX 33347384 33347467 -133302829 - Lx9 LINE L1 -8 7636 7554 3 839 724 264 42 0 chrX 33347467 33347660 -133302636 + Lx9 LINE L1 7201 7401 -243 3 839 253 111 0 22 chrX 33347663 33347709 -133302587 - Lx9 LINE L1 -2 7642 7598 3 839 1036 113 161 0 chrX 33348667 33348853 -133301443 - Lx2 LINE L1 -5 6992 6777 3 839 7255 130 52 14 chrX 33348854 33350370 -133299926 - Lx2 LINE L1 -353 6644 5030 3 839 2158 215 134 56 chrX 33351266 33351466 -133298830 - RLTR40 LTR ERVK -66 751 544 3 839 450 36 0 0 chrX 33351466 33351522 -133298774 + (TC)n Simple_repeat Simple_repeat 1 56 0 3 839 2158 215 134 56 chrX 33351522 33352015 -133298281 - RLTR40 LTR ERVK -274 543 4 3 839 3069 72 41 17 chrX 33352593 33353004 -133297292 + BGLII LTR ERVK 1 421 0 3 839 6486 69 6 1 chrX 33353825 33354619 -133295677 - L1_Mus3 LINE L1 -16 6622 5825 3 839 1778 189 55 0 chrX 33354804 33355116 -133295180 - RLTR20B1 LTR ERVK -234 329 1 3 839 737 321 91 19 chrX 33355125 33355697 -133294599 - L1MB7 LINE L1 -56 6128 5516 3 839 846 268 115 0 chrX 33356296 33356505 -133293791 - B4A SINE B4 -59 233 1 3 839 216 0 0 0 chrX 33356538 33356562 -133293734 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 839 30 45 0 0 chrX 33357630 33357674 -133292622 + AT_rich Low_complexity Low_complexity 1 44 0 3 839 4325 62 54 35 chrX 33357674 33358246 -133292050 - L1_Mus2 LINE L1 0 6566 5984 3 839 1050 85 18 12 chrX 33358242 33358409 -133291887 + L1_Mus3 LINE L1 6470 6637 -1 3 839 3504 49 19 3 chrX 33358453 33359031 -133291265 - L1_Mus2 LINE L1 -569 5997 5414 3 839 629 253 6 38 chrX 33360869 33361029 -133289267 - RSINE1 SINE B4 -8 157 3 3 839 1591 148 14 4 chrX 33362254 33362532 -133287764 + Lx3C LINE L1 3698 3978 -1899 3 839 36282 35 1 0 chrX 33362533 33368468 -133281828 + L1Md_T LINE L1 1 5589 -297 3 839 9564 6 0 0 chrX 33368468 33369464 -133280832 + L1Md_T LINE L1 5590 6585 0 3 839 10550 159 14 60 chrX 33369471 33372620 -133277676 + Lx3C LINE L1 3955 6972 -4 3 839 701 200 20 52 chrX 33372743 33372896 -133277400 - B1_Mur2 SINE Alu -1 148 1 3 839 251 303 158 39 chrX 33373120 33373247 -133277049 + ID_B1 SINE B4 81 222 -2 3 839 248 333 0 0 chrX 33373251 33373314 -133276982 + ID4 SINE ID 3 65 -18 3 839 639 0 0 0 chrX 33373318 33373389 -133276907 + (TAGA)n Simple_repeat Simple_repeat 3 73 0 3 839 4672 14 0 0 chrX 33373695 33374212 -133276084 - L1Md_A LINE L1 -248 6334 5818 3 839 2380 16 0 0 chrX 33374212 33374510 -133275786 + L1Md_A LINE L1 6328 6582 0 3 839 198 0 0 0 chrX 33374545 33374567 -133275729 + (A)n Simple_repeat Simple_repeat 1 22 0 3 839 1867 66 4 0 chrX 33375030 33375258 -133275038 - L1_Mus1 LINE L1 -2 6565 6337 3 839 686 216 29 0 chrX 33375262 33375401 -133274895 + B3A SINE B2 10 152 -46 3 839 1706 217 86 39 chrX 33375426 33375551 -133274745 - Lx5 LINE L1 0 7050 6917 3 839 195 42 0 0 chrX 33375551 33375575 -133274721 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 839 1706 217 86 39 chrX 33375575 33375880 -133274416 - Lx5 LINE L1 -134 6916 6600 3 839 260 181 0 172 chrX 33376210 33376297 -133273999 - B1_Mur1 SINE Alu 0 149 78 3 839 442 185 19 115 chrX 33376302 33376406 -133273890 + B3 SINE B2 123 216 0 3 839 8737 21 0 0 chrX 33376550 33377895 -133272401 - L1Md_T LINE L1 -1 6581 5237 3 839 365 291 129 26 chrX 33377910 33378065 -133272231 - L1MC3 LINE L1 -1265 6520 6350 3 839 650 182 8 8 chrX 33378621 33378748 -133271548 - URR1B DNA MER1_type 0 225 99 3 839 855 234 61 94 chrX 33379261 33379591 -133270705 - MLT1B LTR MaLR 0 390 72 3 839 362 308 87 0 chrX 33379629 33379733 -133270563 - PB1 SINE Alu -14 113 1 3 839 1498 244 146 20 chrX 33380048 33380597 -133269699 - L1MB7 LINE L1 -39 6145 5528 3 839 27 0 0 0 chrX 33380629 33380656 -133269640 + AT_rich Low_complexity Low_complexity 1 27 0 3 839 754 242 136 5 chrX 33380658 33380849 -133269447 - B3 SINE B2 0 216 1 3 839 499 261 73 118 chrX 33380857 33381061 -133269235 - B3A SINE B2 -2 196 2 3 839 2565 86 6 15 chrX 33381184 33381514 -133268782 + ORR1A2 LTR MaLR 1 327 0 3 839 23 33 0 0 chrX 33382047 33382077 -133268219 + AT_rich Low_complexity Low_complexity 1 30 0 3 839 358 278 22 11 chrX 33382159 33382250 -133268046 + PB1D10 SINE Alu 26 117 0 3 839 199 351 21 11 chrX 33383044 33383139 -133267157 + MER5A DNA MER1_type 90 185 -4 3 839 314 317 8 54 chrX 33383218 33383348 -133266948 - MER63B DNA AcHobo -2 434 311 3 839 579 279 38 31 chrX 33383481 33383640 -133266656 + RSINE1 SINE B4 2 161 -4 3 839 30 27 0 0 chrX 33383666 33383703 -133266593 + AT_rich Low_complexity Low_complexity 1 37 0 3 839 318 290 131 40 chrX 33384319 33384495 -133265801 + Charlie2a DNA MER1_type 70 261 -2600 3 839 902 271 144 20 chrX 33384533 33385082 -133265214 + Charlie2a DNA MER1_type 2037 2653 -208 3 839 281 317 0 68 chrX 33385272 33385360 -133264936 + ID2 SINE ID 3 84 -68 3 839 290 321 36 0 chrX 33385488 33385572 -133264724 - L2 LINE L2 -649 2770 2684 3 839 2110 115 0 127 chrX 33385782 33386151 -133264145 - ORR1A3 LTR MaLR 0 326 5 3 839 232 139 0 0 chrX 33386153 33386189 -133264107 - ORR1A3-int LTR MaLR -1 1962 1927 3 839 1056 208 234 6 chrX 33386157 33386408 -133263888 - ORR1A3-int LTR MaLR -761 1031 706 3 839 459 0 0 0 chrX 33386408 33386459 -133263837 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 839 1056 198 98 4 chrX 33386459 33386594 -133263702 - ORR1A3-int LTR MaLR -1088 875 629 3 839 258 32 0 0 chrX 33386924 33386955 -133263341 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 839 260 295 19 104 chrX 33386978 33387084 -133263212 - PB1D10 SINE Alu -3 114 18 3 839 829 104 96 14 chrX 33387249 33387395 -133262901 - URR1B DNA MER1_type 0 225 68 3 839 321 62 0 59 chrX 33387557 33387625 -133262671 + (TTTG)n Simple_repeat Simple_repeat 1 64 0 3 839 1163 71 43 0 chrX 33387928 33388069 -133262227 + B1_Mus1 SINE Alu 2 148 0 3 839 350 48 0 0 chrX 33388079 33388121 -133262175 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 839 547 113 20 10 chrX 33388122 33388220 -133262076 + (GGAA)n Simple_repeat Simple_repeat 2 100 0 3 839 726 231 27 21 chrX 33388479 33388665 -133261631 + B3 SINE B2 2 188 -28 3 839 492 32 0 0 chrX 33388787 33388849 -133261447 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 839 1538 33 16 11 chrX 33388870 33389055 -133261241 + B2_Mm1a SINE B2 2 187 -6 3 839 1210 48 0 7 chrX 33389117 33389264 -133261032 + B1_Mm SINE Alu 2 147 0 4 839 225 196 0 0 chrX 33389266 33389317 -133260979 + A-rich Low_complexity Low_complexity 1 51 0 4 839 383 264 0 0 chrX 33389490 33389562 -133260734 + PB1D10 SINE Alu 1 72 -45 4 839 508 283 87 79 chrX 33389638 33390168 -133260128 + L1MC4 LINE L1 7481 8014 -28 4 839 338 260 0 27 chrX 33390928 33391003 -133259293 - ID4_ SINE ID -4 79 7 4 839 24 32 0 0 chrX 33391014 33391045 -133259251 + AT_rich Low_complexity Low_complexity 1 31 0 4 839 3693 68 2 2 chrX 33391389 33391891 -133258405 - RLTR13D1 LTR ERVK 0 806 305 4 839 471 329 7 7 chrX 33391913 33392060 -133258236 - RSINE1 SINE B4 -15 150 4 4 839 306 0 0 0 chrX 33392258 33392292 -133258004 + (TTG)n Simple_repeat Simple_repeat 3 36 0 4 839 329 322 69 13 chrX 33392432 33392665 -133257631 - L1ME4a LINE L1 -194 5930 5685 4 839 602 214 0 78 chrX 33392922 33393064 -133257232 + B1F2 SINE Alu 2 132 -17 4 839 642 236 27 14 chrX 33393386 33393532 -133256764 + B1_Mur1 SINE Alu 2 149 0 4 839 486 136 0 0 chrX 33393563 33393644 -133256652 + (CA)n Simple_repeat Simple_repeat 1 81 0 4 839 288 0 0 0 chrX 33393938 33393970 -133256326 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 4 839 537 30 0 0 chrX 33394005 33394072 -133256224 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 839 207 0 0 0 chrX 33394536 33394559 -133255737 + (A)n Simple_repeat Simple_repeat 1 23 0 4 839 1217 41 0 27 chrX 33394566 33394716 -133255580 + B1_Mus2 SINE Alu 2 147 0 4 839 2201 190 52 7 chrX 33395548 33395951 -133254345 - MTC LTR MaLR 0 421 1 4 839 417 308 108 0 chrX 33396014 33396144 -133254152 + B1F SINE Alu 3 146 -3 4 839 21 71 0 0 chrX 33396736 33396778 -133253518 + AT_rich Low_complexity Low_complexity 1 42 0 4 839 2648 235 50 84 chrX 33396778 33397048 -133253248 - RCHARR1 DNA MER1_type -111 863 583 4 839 1995 146 58 21 chrX 33397048 33397425 -133252871 + ORR1B1 LTR MaLR 2 392 -2 4 839 2648 235 50 84 chrX 33397425 33397672 -133252624 - RCHARR1 DNA MER1_type -392 582 368 4 839 890 188 0 7 chrX 33397672 33397817 -133252479 + B1_Mus1 SINE Alu 3 146 -2 4 839 2648 235 50 84 chrX 33397817 33398191 -133252105 - RCHARR1 DNA MER1_type -607 367 1 4 839 1138 59 0 0 chrX 33398196 33398332 -133251964 + B1_Mm SINE Alu 1 136 -11 4 839 308 43 22 0 chrX 33398332 33398378 -133251918 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 4 839 1670 61 9 9 chrX 33398715 33398946 -133251350 - L1_Mus3 LINE L1 -6 6632 6402 4 839 1649 21 5 0 chrX 33398956 33399143 -133251153 - B2_Mm1t SINE B2 -5 188 1 4 839 889 203 17 0 chrX 33399172 33399349 -133250947 + B3 SINE B2 3 182 -34 4 839 259 247 24 12 chrX 33399349 33399431 -133250865 + (TA)n Simple_repeat Simple_repeat 2 84 0 4 839 215 386 11 0 chrX 33399453 33399541 -133250755 + L2 LINE L2 2666 2754 -665 4 839 865 219 0 24 chrX 33399561 33399584 -133250712 - RSINE1 SINE B4 -2 163 141 4 839 387 0 0 0 chrX 33399584 33399627 -133250669 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 839 865 219 0 24 chrX 33399627 33399767 -133250529 - RSINE1 SINE B4 -25 140 4 4 839 276 30 0 0 chrX 33399922 33399955 -133250341 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 839 39413 9 0 3 chrX 33400109 33406386 -133243910 + L1Md_A LINE L1 1 5586 -297 4 839 9216 2 0 0 chrX 33406386 33407382 -133242914 + L1Md_A LINE L1 5587 6582 0 4 839 303 287 158 44 chrX 33407868 33408220 -133242076 + L1M5 LINE L1 3840 4240 -1906 4 839 1252 33 0 0 chrX 33408220 33408372 -133241924 + L1Md_A LINE L1 6431 6582 0 4 839 303 287 158 44 chrX 33408372 33408431 -133241865 + L1M5 LINE L1 4241 4298 -1848 4 839 238 182 0 83 chrX 33408443 33408503 -133241793 + 4.5SRNA scRNA scRNA 32 86 -8 4 839 673 148 0 0 chrX 33408452 33408560 -133241736 + B1_Mur4 SINE Alu 42 149 -1 4 839 464 329 27 27 chrX 33408591 33408741 -133241555 + RSINE1 SINE B4 14 163 -2 4 839 1284 27 0 0 chrX 33408788 33408934 -133241362 + B1_Mm SINE Alu 1 146 -1 4 839 393 75 0 0 chrX 33409249 33409302 -133240994 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 839 1059 52 0 0 chrX 33409475 33409609 -133240687 + (GAAAA)n Simple_repeat Simple_repeat 4 137 0 4 839 726 263 89 33 chrX 33409612 33409883 -133240413 + B4 SINE B4 2 287 -5 4 839 315 105 0 0 chrX 33409897 33409954 -133240342 + (CAGA)n Simple_repeat Simple_repeat 2 58 0 4 839 180 158 0 0 chrX 33410207 33410245 -133240051 + A-rich Low_complexity Low_complexity 1 38 0 4 839 1085 71 0 0 chrX 33410245 33410386 -133239910 - Lx LINE L1 -573 6081 5941 4 839 4130 98 12 0 chrX 33410386 33410959 -133239337 + Lx LINE L1 6071 6650 -4 4 839 23 54 0 0 chrX 33410993 33411030 -133239266 + AT_rich Low_complexity Low_complexity 1 37 0 4 839 23 33 0 0 chrX 33411070 33411100 -133239196 + AT_rich Low_complexity Low_complexity 1 30 0 4 839 26 30 0 0 chrX 33411378 33411411 -133238885 + AT_rich Low_complexity Low_complexity 1 33 0 4 839 1129 228 75 52 chrX 33411509 33411686 -133238610 + MTD LTR MaLR 6 198 -221 4 839 1982 138 123 39 chrX 33411686 33412124 -133238172 - IAPLTR2_Mm LTR ERVK 0 475 1 4 839 1129 221 72 41 chrX 33412124 33412321 -133237975 + MTD LTR MaLR 170 398 -21 4 839 3790 154 25 67 chrX 33412947 33413038 -133237258 + Lx2B LINE L1 5747 5826 -1174 4 839 1129 82 0 0 chrX 33413038 33413185 -133237111 + B1_Mus2 SINE Alu 1 147 0 4 839 3790 154 25 67 chrX 33413185 33413867 -133236429 + Lx2B LINE L1 5827 6487 -513 4 839 469 222 27 57 chrX 33413857 33414022 -133236274 + Lx2B LINE L1 6916 7050 -8 4 839 1124 215 5 5 chrX 33414032 33414242 -133236054 + B3 SINE B2 1 210 -6 4 839 331 268 28 0 chrX 33414371 33414442 -133235854 + PB1D10 SINE Alu 13 85 -32 4 839 273 57 0 0 chrX 33414458 33414493 -133235803 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 839 301 203 22 8 chrX 33414498 33414634 -133235662 + GA-rich Low_complexity Low_complexity 1 138 0 4 839 346 230 135 96 chrX 33416004 33416028 -133234268 - B2_Mm2 SINE B2 -9 186 165 4 839 231 60 60 0 chrX 33416028 33416078 -133234218 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 839 349 230 135 96 chrX 33416078 33416231 -133234065 - B3 SINE B2 -38 178 2 4 839 509 291 35 7 chrX 33416354 33416496 -133233800 - RSINE1 SINE B4 -7 158 13 4 839 314 313 3 38 chrX 33416520 33416641 -133233655 - PB1D10 SINE Alu 0 120 1 4 839 24 32 0 0 chrX 33416901 33416932 -133233364 + AT_rich Low_complexity Low_complexity 1 31 0 4 839 2522 91 11 16 chrX 33417141 33417511 -133232785 - Lx LINE L1 -6 6648 6281 4 839 846 308 81 18 chrX 33417682 33418228 -133232068 - L2a LINE L2 -6 3420 2834 4 839 573 55 0 0 chrX 33418314 33418387 -133231909 + (CTTG)n Simple_repeat Simple_repeat 2 74 0 4 839 422 255 17 43 chrX 33418489 33418604 -133231692 + B1F1 SINE Alu 6 117 0 4 839 207 0 0 0 chrX 33418803 33418826 -133231470 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 839 303 283 47 0 chrX 33419104 33419210 -133231086 - Charlie14a DNA MER1_type -916 248 138 4 839 741 250 61 0 chrX 33419465 33419661 -133230635 - B3 SINE B2 -5 211 4 4 839 254 247 59 40 chrX 33419691 33419792 -133230504 - Lx8 LINE L1 -9 7464 7362 4 839 593 231 114 79 chrX 33419807 33420009 -133230287 - B3 SINE B2 -3 213 5 4 839 978 161 0 0 chrX 33420019 33420193 -133230103 + GA-rich Low_complexity Low_complexity 3 176 0 4 839 1097 219 19 0 chrX 33420200 33420415 -133229881 - Lx8 LINE L1 -142 7331 7113 4 839 1912 231 69 13 chrX 33420413 33420890 -133229406 - Lx8 LINE L1 -570 6903 6400 4 839 204 232 14 28 chrX 33420927 33420998 -133229298 + A-rich Low_complexity Low_complexity 4 73 0 4 839 415 288 33 80 chrX 33421371 33421426 -133228870 - MLT1G1 LTR MaLR -435 144 95 4 839 448 261 133 6 chrX 33421426 33421584 -133228712 + MER45A DNA Tip100 1 178 0 4 839 415 288 33 80 chrX 33421584 33421679 -133228617 - MLT1G1 LTR MaLR -485 94 1 4 839 1072 174 14 19 chrX 33422314 33422530 -133227766 - MTD LTR MaLR 0 419 205 4 839 1965 160 51 27 chrX 33422681 33423053 -133227243 + RMER19B LTR ERVK 509 889 -13 4 839 315 0 0 0 chrX 33423129 33423164 -133227132 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 839 253 244 200 0 chrX 33423237 33423327 -133226969 - PB1D10 SINE Alu -2 115 8 4 840 26 0 0 0 chrX 33423656 33423682 -133226614 + AT_rich Low_complexity Low_complexity 1 26 0 4 840 820 282 5 5 chrX 33423749 33423959 -133226337 + B3 SINE B2 1 210 -6 4 840 402 315 20 27 chrX 33424486 33424636 -133225660 - B1F SINE Alu 0 149 1 4 840 1501 46 5 35 chrX 33425322 33425523 -133224773 - B2_Mm2 SINE B2 0 195 1 4 840 270 318 0 15 chrX 33425787 33425854 -133224442 + tRNA-Ala-GCY_ tRNA tRNA 2 67 -8 4 840 210 254 54 40 chrX 33425868 33425942 -133224354 + B1F SINE Alu 65 139 -10 4 840 930 8 8 16 chrX 33426125 33426246 -133224050 + (TCTCC)n Simple_repeat Simple_repeat 2 121 0 4 840 244 70 0 44 chrX 33426323 33426368 -133223928 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 4 840 1206 28 7 0 chrX 33426369 33426510 -133223786 - B1_Mus1 SINE Alu -2 146 5 4 840 233 313 47 47 chrX 33426689 33426880 -133223416 + RMER15 LTR ERVL 378 568 -7 4 840 800 258 10 15 chrX 33426883 33427084 -133223212 - B3 SINE B2 -16 200 1 4 840 387 0 0 0 chrX 33427503 33427546 -133222750 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 840 21 0 0 0 chrX 33428865 33428886 -133221410 + GC_rich Low_complexity Low_complexity 1 21 0 4 840 183 162 0 0 chrX 33429508 33429545 -133220751 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 840 413 232 0 108 chrX 33430942 33431053 -133219243 - PB1D10 SINE Alu -8 109 11 4 840 285 29 0 0 chrX 33431200 33431234 -133219062 + (T)n Simple_repeat Simple_repeat 1 34 0 4 840 261 0 0 0 chrX 33431435 33431464 -133218832 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 840 252 0 0 0 chrX 33431464 33431491 -133218805 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 840 180 0 0 103 chrX 33431591 33431630 -133218666 + (TTG)n Simple_repeat Simple_repeat 2 36 0 4 840 235 353 10 19 chrX 33432833 33432863 -133217433 - B4A SINE B4 -105 187 86 4 840 311 239 14 27 chrX 33432863 33432936 -133217360 - PB1D10 SINE Alu -45 72 1 4 840 216 0 0 0 chrX 33433213 33433237 -133217059 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 840 26 30 0 0 chrX 33433690 33433723 -133216573 + AT_rich Low_complexity Low_complexity 1 33 0 5 840 434 88 15 0 chrX 33433914 33433982 -133216314 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 840 386 260 74 131 chrX 33434020 33434317 -133215979 - B4 SINE B4 -11 281 2 5 840 335 271 174 18 chrX 33434386 33434495 -133215801 - PB1D10 SINE Alu 0 127 2 5 840 300 261 34 0 chrX 33434498 33434586 -133215710 - Charlie5 DNA MER1_type -2525 99 9 5 840 225 342 25 0 chrX 33434735 33434814 -133215482 + ID2 SINE ID 2 82 -1 5 840 195 42 0 0 chrX 33434829 33434853 -133215443 + (CAAAC)n Simple_repeat Simple_repeat 5 28 0 5 840 448 319 69 0 chrX 33434856 33435060 -133215236 - L1M5 LINE L1 -539 5585 5368 5 840 397 333 36 21 chrX 33435376 33435569 -133214727 - L3 LINE CR1 -266 4223 4028 5 840 263 295 122 8 chrX 33435767 33435890 -133214406 + Lx8 LINE L1 7219 7355 -118 5 840 414 0 0 0 chrX 33435941 33435987 -133214309 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 840 23 0 0 0 chrX 33437057 33437080 -133213216 + AT_rich Low_complexity Low_complexity 1 23 0 5 840 324 0 0 0 chrX 33437318 33437354 -133212942 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 840 342 289 22 11 chrX 33437380 33437471 -133212825 - RSINE1 SINE B4 -72 93 2 5 840 405 109 0 0 chrX 33437617 33437681 -133212615 + (CA)n Simple_repeat Simple_repeat 2 65 0 5 840 198 0 0 0 chrX 33437807 33437829 -133212467 + (T)n Simple_repeat Simple_repeat 1 22 0 5 840 568 302 72 40 chrX 33438274 33438470 -133211826 + B4 SINE B4 7 204 -88 5 840 450 0 0 0 chrX 33438470 33438520 -133211776 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 840 568 302 72 40 chrX 33438520 33438599 -133211697 + B4 SINE B4 205 290 -2 5 840 324 94 0 0 chrX 33438635 33438688 -133211608 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 840 354 244 12 12 chrX 33438730 33438813 -133211483 - ID4_ SINE ID 0 83 1 5 840 661 222 25 23 chrX 33439352 33439539 -133210757 - B3 SINE B2 -3 192 2 5 840 357 250 186 35 chrX 33440629 33440828 -133209468 + L1MC4 LINE L1 7690 7918 -124 5 840 212 0 0 35 chrX 33440978 33441007 -133209289 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 5 840 223 182 45 0 chrX 33441199 33441243 -133209053 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 5 840 221 222 41 33 chrX 33441298 33441419 -133208877 + (TTATA)n Simple_repeat Simple_repeat 2 123 0 5 840 748 229 14 0 chrX 33441420 33441564 -133208732 + B1_Mur1 SINE Alu 2 147 -2 5 840 249 57 0 0 chrX 33441574 33441609 -133208687 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 840 3674 177 147 46 chrX 33442038 33442142 -133208154 - Lx7 LINE L1 0 7696 7552 5 840 225 0 0 0 chrX 33442142 33442167 -133208129 + (TAA)n Simple_repeat Simple_repeat 1 25 0 5 840 3674 177 147 46 chrX 33442167 33442909 -133207387 - Lx7 LINE L1 -145 7551 6753 5 840 1289 128 108 0 chrX 33442909 33443112 -133207184 - URR1A DNA MER1_type -1 225 1 5 840 3674 177 147 46 chrX 33443112 33443170 -133207126 - Lx7 LINE L1 -944 6752 6701 5 840 633 281 40 17 chrX 33443190 33443364 -133206932 - MLT1D LTR MaLR -79 426 249 5 840 288 0 0 0 chrX 33443505 33443537 -133206759 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 5 840 249 347 0 0 chrX 33443537 33443612 -133206684 - ID4_ SINE ID -6 77 3 5 840 372 273 78 140 chrX 33443615 33443678 -133206618 - MLT1D LTR MaLR -325 180 119 5 840 351 0 0 0 chrX 33443678 33443717 -133206579 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 840 372 273 78 140 chrX 33443717 33443832 -133206464 - MLT1D LTR MaLR -387 118 13 5 840 297 0 0 0 chrX 33445607 33445640 -133204656 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 840 268 216 28 59 chrX 33446175 33446283 -133204013 - ID2 SINE ID -54 98 2 5 840 302 143 13 0 chrX 33446469 33446546 -133203750 + CT-rich Low_complexity Low_complexity 1 78 0 5 840 1465 45 80 0 chrX 33447296 33447312 -133202984 - B2_Mm1a SINE B2 -2 191 176 5 840 216 0 0 0 chrX 33447312 33447336 -133202960 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 5 840 1465 45 80 0 chrX 33447336 33447495 -133202801 - B2_Mm1a SINE B2 -18 175 3 5 840 361 0 0 39 chrX 33447898 33447949 -133202347 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 5 840 747 295 152 50 chrX 33447986 33448407 -133201889 - MLT1D LTR MaLR -32 473 10 5 840 440 231 197 8 chrX 33448715 33448837 -133201459 + B3A SINE B2 1 145 -53 5 840 306 73 0 0 chrX 33448848 33448889 -133201407 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 840 355 308 54 7 chrX 33449082 33449229 -133201067 + MIR SINE MIR 98 251 -11 5 840 255 224 58 29 chrX 33449583 33449652 -133200644 + L1MC1 LINE L1 6082 6152 -181 5 840 505 283 20 27 chrX 33449688 33449837 -133200459 - B1F2 SINE Alu 0 149 2 5 840 533 307 0 14 chrX 33449996 33450135 -133200161 - B1F1 SINE Alu -8 141 5 5 840 668 287 15 49 chrX 33450137 33450164 -133200132 - B3A SINE B2 0 198 174 5 840 188 86 29 0 chrX 33450164 33450199 -133200097 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 840 668 287 15 49 chrX 33450199 33450376 -133199920 - B3A SINE B2 -25 173 1 5 840 369 0 0 0 chrX 33450378 33450419 -133199877 + (TTA)n Simple_repeat Simple_repeat 2 42 0 5 840 575 202 70 0 chrX 33450423 33450537 -133199759 - B1_Mur2 SINE Alu -27 122 1 5 840 1436 143 9 0 chrX 33450765 33450982 -133199314 - URR1B DNA MER1_type -1 224 6 5 840 225 348 71 36 chrX 33450974 33450990 -133199306 - B4 SINE B4 -76 216 156 5 840 413 276 57 0 chrX 33450990 33451095 -133199201 - PB1D10 SINE Alu -33 116 6 5 840 225 348 71 36 chrX 33451095 33451114 -133199182 - B4 SINE B4 -76 155 72 5 840 459 256 82 44 chrX 33451134 33451269 -133199027 - B1F2 SINE Alu 0 149 10 5 840 231 36 0 0 chrX 33451350 33451378 -133198918 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 5 840 21 36 0 0 chrX 33451951 33451979 -133198317 + AT_rich Low_complexity Low_complexity 1 28 0 5 840 420 243 9 46 chrX 33452134 33452242 -133198054 + PB1D10 SINE Alu 7 110 -7 5 840 283 298 131 68 chrX 33452242 33452257 -133198039 + B4A SINE B4 92 235 -57 5 840 816 251 148 12 chrX 33452257 33452507 -133197789 + B4A SINE B4 3 286 -6 5 840 283 298 131 68 chrX 33452507 33452572 -133197724 + B4A SINE B4 236 292 0 5 840 325 254 16 7 chrX 33452759 33452853 -133197443 + PB1D10 SINE Alu 24 120 0 5 840 255 224 58 29 chrX 33452878 33452947 -133197349 - L1MC1 LINE L1 -181 6152 6082 5 840 22 35 0 0 chrX 33453054 33453083 -133197213 + AT_rich Low_complexity Low_complexity 1 29 0 5 840 559 237 34 0 chrX 33453351 33453469 -133196827 - B1_Mur1 SINE Alu -7 142 21 5 840 2777 187 100 4 chrX 33453522 33454218 -133196078 - Lx9 LINE L1 -1 7643 6881 5 840 474 167 10 19 chrX 33454302 33454406 -133195890 - Lx6 LINE L1 0 7460 7358 5 840 392 215 12 25 chrX 33454412 33454493 -133195803 - PB1D10 SINE Alu -37 80 1 5 840 2274 127 15 6 chrX 33455011 33455345 -133194951 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 840 6694 58 13 12 chrX 33455347 33456196 -133194100 - IAPEz-int LTR ERVK -2 6479 5630 5 840 24068 47 36 18 chrX 33456182 33459196 -133191100 - IAPEz-int LTR ERVK -3405 3076 8 5 840 2378 118 15 3 chrX 33459196 33459529 -133190767 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 840 295 278 9 22 chrX 33460866 33460981 -133189315 - ID2 SINE ID -26 126 15 5 840 1291 144 123 43 chrX 33461109 33461385 -133188911 - Lx4B LINE L1 -3 7055 6758 5 840 853 289 115 33 chrX 33461421 33461846 -133188450 - MLT1E1A LTR MaLR -9 671 212 5 840 261 329 37 42 chrX 33461993 33462152 -133188144 + MIR SINE MIR 90 252 -16 5 840 413 298 39 0 chrX 33462310 33462414 -133187882 + PB1D7 SINE Alu 11 118 -2 5 840 684 170 94 94 chrX 33462469 33462618 -133187678 + B1_Mur2 SINE Alu 1 149 0 5 840 392 91 0 15 chrX 33462724 33462791 -133187505 + (TG)n Simple_repeat Simple_repeat 2 67 0 5 840 278 288 91 106 chrX 33463044 33463176 -133187120 + B3A SINE B2 33 162 -36 5 840 355 331 142 0 chrX 33463324 33463451 -133186845 + B1F1 SINE Alu 5 149 0 5 840 874 281 80 117 chrX 33463481 33464428 -133185868 + L1MB3 LINE L1 5203 6103 -80 5 840 447 287 14 2 chrX 33464440 33464554 -133185742 - PB1D10 SINE Alu -3 124 2 5 840 246 241 23 11 chrX 33464556 33464644 -133185652 + L1MB4 LINE L1 6091 6179 -1 5 840 351 0 0 0 chrX 33464740 33464779 -133185517 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 840 237 286 8 125 chrX 33464985 33465113 -133185183 + RMER21A LTR ERV1 231 343 -604 5 840 611 61 12 0 chrX 33465660 33465742 -133184554 + B1_Mm SINE Alu 65 147 0 5 840 595 252 95 7 chrX 33466167 33466315 -133183981 + RSINE1 SINE B4 3 163 -2 5 840 25 51 0 0 chrX 33466477 33466516 -133183780 + AT_rich Low_complexity Low_complexity 1 39 0 5 840 264 318 19 9 chrX 33466679 33466787 -133183509 - PB1D10 SINE Alu -4 113 5 5 840 339 164 0 0 chrX 33467091 33467152 -133183144 + T-rich Low_complexity Low_complexity 1 61 0 5 840 979 104 0 0 chrX 33467152 33467286 -133183010 - B1_Mus1 SINE Alu 0 148 15 5 840 995 153 0 39 chrX 33467337 33467479 -133182817 + B1_Mur4 SINE Alu 1 142 -8 5 840 260 27 27 0 chrX 33467479 33467516 -133182780 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 5 840 995 153 0 39 chrX 33467516 33467529 -133182767 + B1_Mur4 SINE Alu 143 150 0 5 840 212 184 20 0 chrX 33469729 33469805 -133180491 + (CAAA)n Simple_repeat Simple_repeat 1 77 0 5 840 466 294 36 7 chrX 33470339 33470476 -133179820 + RMER15 LTR ERVL 422 562 -13 5 840 208 311 99 45 chrX 33470520 33470631 -133179665 + L2b LINE L2 3236 3352 -23 5 840 213 94 0 0 chrX 33470876 33470908 -133179388 + (T)n Simple_repeat Simple_repeat 1 32 0 5 840 1393 225 33 16 chrX 33471027 33471348 -133178948 + MTD LTR MaLR 1 313 -66 5 840 856 181 35 0 chrX 33472034 33472178 -133178118 - B1_Mur4 SINE Alu -1 149 1 5 840 232 349 45 0 chrX 33472198 33472264 -133178032 - PB1 SINE Alu -32 95 27 5 840 180 0 0 0 chrX 33473273 33473293 -133177003 + (T)n Simple_repeat Simple_repeat 1 20 0 5 840 757 204 0 14 chrX 33473491 33473624 -133176672 + B1_Mur3 SINE Alu 8 138 -11 5 840 189 0 0 0 chrX 33473624 33473645 -133176651 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 6 840 180 242 81 40 chrX 33473831 33473930 -133176366 + MIR SINE MIR 118 220 -42 6 840 804 263 146 28 chrX 33474121 33474375 -133175921 + B4A SINE B4 2 285 -7 6 840 552 30 0 0 chrX 33474494 33474560 -133175736 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 840 284 272 49 0 chrX 33474591 33474672 -133175624 - B1F1 SINE Alu -64 85 1 6 840 216 329 29 0 chrX 33474614 33474684 -133175612 - B4A SINE B4 -147 145 74 6 840 281 314 70 31 chrX 33474897 33475025 -133175271 + L2b LINE L2 3226 3358 -17 6 840 488 204 108 58 chrX 33475297 33475417 -133174879 + B1F SINE Alu 24 149 0 6 840 418 263 34 109 chrX 33475848 33476023 -133174273 - RSINE1 SINE B4 0 165 4 6 840 1204 30 0 0 chrX 33476089 33476222 -133174074 - B1_Mm SINE Alu -14 133 1 6 840 240 59 0 0 chrX 33477276 33477310 -133172986 + (CAAAC)n Simple_repeat Simple_repeat 2 35 0 6 840 219 280 0 0 chrX 33477697 33477790 -133172506 + T-rich Low_complexity Low_complexity 1 93 0 6 840 646 133 141 8 chrX 33477790 33477911 -133172385 - B1_Mur1 SINE Alu 0 149 13 6 840 27 62 0 0 chrX 33477917 33477965 -133172331 + AT_rich Low_complexity Low_complexity 1 48 0 6 840 1149 153 118 10 chrX 33478236 33478440 -133171856 - URR1A DNA MER1_type 0 226 1 6 840 25 0 0 0 chrX 33478823 33478848 -133171448 + AT_rich Low_complexity Low_complexity 1 25 0 6 840 254 355 0 0 chrX 33478849 33478911 -133171385 - ID4_ SINE ID -4 79 18 6 840 796 204 35 0 chrX 33478947 33479089 -133171207 - B1_Mus2 SINE Alu 0 147 1 6 840 299 225 108 0 chrX 33479107 33479218 -133171078 - L1MA6 LINE L1 -21 6279 6157 6 840 32 57 0 0 chrX 33479220 33479273 -133171023 + AT_rich Low_complexity Low_complexity 1 53 0 6 840 271 160 80 0 chrX 33479334 33479384 -133170912 - B3A SINE B2 -142 56 3 6 840 271 304 192 32 chrX 33479892 33480079 -133170217 + MIRb SINE MIR 4 220 -48 6 840 614 274 104 42 chrX 33480080 33480320 -133169976 + Lx8 LINE L1 7200 7454 -19 6 840 16676 64 4 2 chrX 33480803 33483623 -133166673 - L1Md_F2 LINE L1 0 7000 3794 6 840 2006 116 6 1 chrX 33483622 33483985 -133166311 - L1Md_F LINE L1 -5693 1031 669 6 840 1007 105 0 14 chrX 33484156 33484301 -133165995 - B1_Mur4 SINE Alu -1 149 7 6 840 614 316 42 11 chrX 33484745 33484762 -133165534 - B3A SINE B2 -1 197 181 6 840 360 0 0 0 chrX 33484762 33484802 -133165494 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 840 614 316 42 11 chrX 33484802 33484973 -133165323 - B3A SINE B2 -18 180 3 6 840 1201 162 0 0 chrX 33485262 33485447 -133164849 - URR1B DNA MER1_type -5 220 36 6 840 311 247 160 11 chrX 33485541 33485635 -133164661 - PB1D10 SINE Alu -9 108 1 6 840 203 250 0 0 chrX 33485823 33485863 -133164433 + (CAT)n Simple_repeat Simple_repeat 2 41 0 6 840 239 347 6 102 chrX 33488437 33488604 -133161692 - MIRb SINE MIR -13 255 105 6 840 812 306 26 22 chrX 33488617 33488884 -133161412 + B4A SINE B4 2 269 -23 6 840 309 262 30 60 chrX 33489152 33489286 -133161010 - L1MA5 LINE L1 0 6300 6171 6 840 1576 235 133 37 chrX 33489792 33490252 -133160044 + MLT1D LTR MaLR 1 504 -1 6 840 268 396 21 7 chrX 33490297 33490442 -133159854 - MER102a DNA MER1_type -2 328 182 6 840 388 212 0 59 chrX 33490487 33490572 -133159724 - ID_B1 SINE B4 -47 177 98 6 840 293 246 0 16 chrX 33490545 33490607 -133159689 - ID4_ SINE ID -17 66 6 6 840 387 289 18 0 chrX 33491353 33491467 -133158829 + PB1D10 SINE Alu 1 116 -1 6 840 537 190 76 25 chrX 33491526 33491645 -133158651 - B1_Mus1 SINE Alu 0 148 24 6 840 424 286 8 8 chrX 33493844 33493964 -133156332 + PB1D7 SINE Alu 1 120 0 6 840 606 118 0 0 chrX 33493964 33494057 -133156239 + (GGGA)n Simple_repeat Simple_repeat 1 93 0 6 840 211 391 51 6 chrX 33495381 33495538 -133154758 - L2a LINE L2 -293 3133 2970 6 840 864 250 60 39 chrX 33495555 33495771 -133154525 + B4A SINE B4 3 224 -68 6 840 1449 76 16 5 chrX 33495771 33495957 -133154339 + B2_Mm2 SINE B2 3 190 -5 6 840 864 250 60 39 chrX 33495957 33495973 -133154323 + B4A SINE B4 225 240 -52 6 840 189 121 0 0 chrX 33495973 33496006 -133154290 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 840 204 97 0 0 chrX 33496068 33496099 -133154197 + (TTG)n Simple_repeat Simple_repeat 2 32 0 6 840 393 321 28 0 chrX 33496106 33496215 -133154081 - PB1D10 SINE Alu -4 113 2 6 840 320 259 241 17 chrX 33496242 33496478 -133153818 - L1MA6 LINE L1 -29 6271 5983 6 840 1096 200 5 50 chrX 33496907 33497128 -133153168 + B3 SINE B2 5 215 -1 6 840 387 278 18 27 chrX 33497259 33497370 -133152926 + PB1 SINE Alu 18 127 0 6 840 1540 6 0 0 chrX 33498284 33498451 -133151845 + L1Md_A LINE L1 6416 6582 0 6 840 591 252 82 0 chrX 33498506 33498641 -133151655 - ID_B1 SINE B4 0 224 79 6 840 200 196 0 56 chrX 33498672 33498726 -133151570 + (TATATG)n Simple_repeat Simple_repeat 3 53 0 6 840 189 94 0 0 chrX 33499612 33499644 -133150652 + (A)n Simple_repeat Simple_repeat 1 32 0 6 840 24 32 0 0 chrX 33500225 33500256 -133150040 + AT_rich Low_complexity Low_complexity 1 31 0 1 840 678 264 19 0 chrX 33500285 33500444 -133149852 - RSINE1 SINE B4 -1 164 3 2 840 818 225 46 46 chrX 33501053 33501249 -133149047 - B3A SINE B2 -1 197 2 3 840 180 377 13 13 chrX 33501812 33501890 -133148406 + L2b LINE L2 3288 3365 -10 4 840 635 94 10 0 chrX 33504045 33504141 -133146155 + (TTTC)n Simple_repeat Simple_repeat 2 98 0 5 840 22 70 0 0 chrX 33504200 33504243 -133146053 + AT_rich Low_complexity Low_complexity 1 43 0 6 840 424 319 26 53 chrX 33505585 33505597 -133144699 - RSINE1 SINE B4 -8 157 147 7 840 348 24 0 0 chrX 33505597 33505638 -133144658 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 840 424 319 26 53 chrX 33505638 33505777 -133144519 - RSINE1 SINE B4 -19 146 10 7 840 26 0 0 0 chrX 33505783 33505809 -133144487 + AT_rich Low_complexity Low_complexity 1 26 0 9 840 818 300 46 27 chrX 33506016 33506276 -133144020 - B4A SINE B4 -10 282 18 1 840 220 241 0 0 chrX 33506363 33506379 -133143917 + (CA)n Simple_repeat Simple_repeat 2 17 0 1 840 311 309 152 41 chrX 33506379 33506524 -133143772 + RSINE1 SINE B4 5 165 0 1 840 220 241 0 0 chrX 33506524 33506561 -133143735 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 840 237 132 0 0 chrX 33507870 33507908 -133142388 + (TCTCCC)n Simple_repeat Simple_repeat 1 38 0 1 840 263 130 0 18 chrX 33508285 33508340 -133141956 + (GGA)n Simple_repeat Simple_repeat 2 55 0 1 840 236 326 0 11 chrX 33509046 33509136 -133141160 - LTR90B LTR LTR -355 441 353 1 840 241 280 0 0 chrX 33509173 33509223 -133141073 - Tigger12c DNA MER2_type -526 208 159 1 840 33 43 0 0 chrX 33509800 33509847 -133140449 + AT_rich Low_complexity Low_complexity 1 47 0 1 840 513 248 42 17 chrX 33510966 33511085 -133139211 - PB1 SINE Alu 0 127 6 1 840 280 333 81 0 chrX 33511168 33511279 -133139017 - MIRb SINE MIR -99 169 50 2 840 752 277 33 57 chrX 33511640 33511939 -133138357 + B4A SINE B4 1 292 0 2 840 229 316 48 57 chrX 33512008 33512132 -133138164 + MIRb SINE MIR 113 235 -33 2 840 2817 133 8 6 chrX 33512498 33512981 -133137315 + Lx2 LINE L1 5983 6466 -531 2 840 1132 132 53 0 chrX 33512982 33513171 -133137125 + Lx2 LINE L1 6798 6996 -1 2 840 243 204 0 0 chrX 33513281 33513325 -133136971 + PB1 SINE Alu 64 107 -20 2 840 323 295 43 75 chrX 33513338 33513499 -133136797 + HAL1-3A_ME LINE L1 2284 2439 -419 2 840 1197 255 45 30 chrX 33513601 33513937 -133136359 + RMER5 LTR ERV1 175 515 -19 2 840 191 296 37 0 chrX 33514221 33514275 -133136021 - MIR SINE MIR -188 74 19 2 840 420 20 0 0 chrX 33514606 33514655 -133135641 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 840 351 0 0 0 chrX 33514846 33514885 -133135411 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 840 318 257 14 0 chrX 33514923 33514993 -133135303 - B4A SINE B4 -6 286 216 2 840 24 67 0 0 chrX 33514994 33515039 -133135257 + AT_rich Low_complexity Low_complexity 1 45 0 3 840 438 300 33 73 chrX 33515066 33515217 -133135079 - B3A SINE B2 -19 179 35 3 840 692 281 100 20 chrX 33515207 33515460 -133134836 - B4A SINE B4 -27 265 1 3 840 289 250 35 103 chrX 33515763 33515879 -133134417 + PB1D7 SINE Alu 9 119 -1 3 840 299 291 44 78 chrX 33516335 33516540 -133133756 + Charlie18a DNA MER1_type 115 312 -30 3 840 221 305 17 0 chrX 33516549 33516608 -133133688 - MIR3 SINE MIR -52 156 97 3 840 216 97 0 0 chrX 33517214 33517245 -133133051 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 840 269 94 0 36 chrX 33517242 33517297 -133132999 + (CAGAGA)n Simple_repeat Simple_repeat 6 58 0 3 840 23 0 0 0 chrX 33517345 33517368 -133132928 + AT_rich Low_complexity Low_complexity 1 23 0 3 840 1093 93 0 0 chrX 33517928 33518068 -133132228 + B1_Mus1 SINE Alu 2 141 -7 3 840 21 0 0 0 chrX 33518714 33518735 -133131561 + AT_rich Low_complexity Low_complexity 1 21 0 4 840 339 383 7 21 chrX 33518795 33518939 -133131357 - B1F2 SINE Alu -6 143 2 4 840 212 226 75 0 chrX 33518959 33519012 -133131284 - MIR SINE MIR -94 168 112 4 840 661 159 113 64 chrX 33519486 33519627 -133130669 + B1_Mur1 SINE Alu 2 149 0 4 840 358 265 194 11 chrX 33519830 33520093 -133130203 - L1ME2 LINE L1 -131 6033 5723 4 840 287 370 60 48 chrX 33520795 33521064 -133129232 - L2a LINE L2 -305 3121 2843 4 840 691 243 105 4 chrX 33521147 33521302 -133128994 + B3A SINE B2 1 169 -26 4 840 225 94 0 0 chrX 33521302 33521334 -133128962 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 840 368 272 122 66 chrX 33521334 33521359 -133128937 + B2_Mm2 SINE B2 170 191 -4 4 840 256 311 53 12 chrX 33521602 33521771 -133128525 + L1ME4a LINE L1 5949 6124 0 4 840 274 239 0 155 chrX 33523001 33523085 -133127211 + ID4_ SINE ID 2 72 -11 4 840 714 165 21 76 chrX 33524151 33524295 -133126001 + B1_Mur1 SINE Alu 13 148 -1 5 840 231 114 0 0 chrX 33524933 33524968 -133125328 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 5 840 555 303 15 0 chrX 33525375 33525507 -133124789 + ID_B1 SINE B4 81 214 -10 5 840 254 274 27 27 chrX 33525525 33525600 -133124696 + ID4_ SINE ID 5 79 -4 5 840 259 200 11 101 chrX 33525826 33525915 -133124381 + LTRIS3 LTR ERV1 1 81 -431 5 840 339 25 0 0 chrX 33527627 33527667 -133122629 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 840 408 355 8 0 chrX 33527785 33527906 -133122390 + PB1 SINE Alu 1 122 -5 5 840 1744 212 25 102 chrX 33528439 33528880 -133121416 - MTD LTR MaLR -8 411 5 5 840 193 270 60 130 chrX 33528961 33529161 -133121135 - L2c LINE L2 -162 3225 3040 5 840 356 267 23 0 chrX 33529569 33529655 -133120641 + PB1D7 SINE Alu 33 120 0 5 840 990 259 38 26 chrX 33529799 33530065 -133120231 - B4 SINE B4 -23 269 1 6 840 689 198 8 8 chrX 33530096 33530213 -133120083 + B1_Mur2 SINE Alu 1 117 -32 6 840 277 0 0 85 chrX 33530225 33530272 -133120024 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 6 840 367 325 200 20 chrX 33530276 33530471 -133119825 + MER2 DNA MER2_type 74 303 -42 6 840 337 298 86 17 chrX 33531003 33531119 -133119177 + L1MB8 LINE L1 5940 6063 -115 6 840 490 88 235 17 chrX 33531358 33531473 -133118823 - Lx9 LINE L1 -80 7564 7425 6 840 375 23 0 0 chrX 33531489 33531533 -133118763 + (TA)n Simple_repeat Simple_repeat 1 44 0 6 840 936 178 80 8 chrX 33531576 33531814 -133118482 - Lx9 LINE L1 -132 7512 7258 6 840 242 319 49 49 chrX 33535212 33535334 -133114962 + MIRc SINE MIR 2 123 -145 6 840 286 296 223 29 chrX 33535465 33535577 -133114719 - L2a LINE L2 -76 3350 3219 6 840 1307 124 71 5 chrX 33535577 33535788 -133114508 + URR1A DNA MER1_type 2 226 0 7 840 286 296 223 29 chrX 33535788 33535985 -133114311 - L2a LINE L2 -208 3218 2981 6 840 297 0 0 0 chrX 33536053 33536086 -133114210 + (TTG)n Simple_repeat Simple_repeat 1 33 0 7 840 286 273 0 83 chrX 33536144 33536228 -133114068 - ID2 SINE ID 0 83 7 7 840 1167 254 11 11 chrX 33536301 33536588 -133113708 - B4 SINE B4 -4 288 2 7 840 388 285 31 117 chrX 33536592 33536755 -133113541 - B1F SINE Alu 0 149 1 7 840 229 273 62 49 chrX 33537244 33537325 -133112971 - MIR SINE MIR -97 111 30 7 840 279 294 0 0 chrX 33537648 33537716 -133112580 - L2b LINE L2 0 3375 3308 7 840 254 267 27 90 chrX 33538087 33538198 -133112098 - L2b LINE L2 -574 2845 2742 7 840 441 295 126 25 chrX 33538690 33538888 -133111408 - MER20 DNA MER1_type 0 219 2 7 840 263 227 75 15 chrX 33538922 33538989 -133111307 + ID4_ SINE ID 3 73 -10 7 840 573 235 45 140 chrX 33539405 33539583 -133110713 + RSINE1 SINE B4 3 163 -2 7 840 249 228 124 16 chrX 33540247 33540376 -133109920 - L1M3 LINE L1 -3101 3042 2900 8 840 23 33 0 0 chrX 33540390 33540420 -133109876 + AT_rich Low_complexity Low_complexity 1 30 0 8 840 752 247 81 34 chrX 33540873 33541255 -133109041 - L1M3 LINE L1 -3227 2913 2514 8 840 334 295 125 20 chrX 33541305 33541457 -133108839 + MER3 DNA MER1_type 37 204 -5 8 840 492 309 77 6 chrX 33541735 33541904 -133108392 + MER5A DNA MER1_type 2 182 -7 8 840 566 183 26 9 chrX 33542003 33542119 -133108177 - PB1D7 SINE Alu -1 119 2 8 840 314 20 0 0 chrX 33542892 33542941 -133107355 - Lx2 LINE L1 0 6997 6949 8 840 421 272 61 0 chrX 33543578 33543692 -133106604 + MER97c DNA MER1_type? 64 184 -906 8 840 236 254 0 0 chrX 33543731 33543794 -133106502 - Lx7 LINE L1 -384 7312 7250 8 840 374 220 171 0 chrX 33544117 33544207 -133106089 - B1F SINE Alu -9 108 1 8 840 673 264 51 0 chrX 33544536 33544714 -133105582 + B3A SINE B2 4 190 -8 8 840 205 159 22 22 chrX 33545332 33545377 -133104919 + (TTA)n Simple_repeat Simple_repeat 3 47 0 9 840 435 238 15 80 chrX 33545403 33545540 -133104756 - RSINE1 SINE B4 -34 131 4 9 840 252 0 0 85 chrX 33546030 33546077 -133104219 + (TAAAA)n Simple_repeat Simple_repeat 2 44 0 9 840 1461 102 28 0 chrX 33546210 33546426 -133103870 + URR1A DNA MER1_type 5 226 0 9 840 261 284 27 0 chrX 33546855 33546929 -133103367 - ID4 SINE ID 0 83 8 9 840 429 20 0 0 chrX 33547238 33547288 -133103008 + (TG)n Simple_repeat Simple_repeat 1 50 0 9 840 369 0 0 0 chrX 33547288 33547328 -133102968 + (GA)n Simple_repeat Simple_repeat 1 41 0 9 840 510 290 69 90 chrX 33547335 33547641 -133102655 - B4A SINE B4 0 292 1 9 840 352 320 69 46 chrX 33548300 33548431 -133101865 - MER68 LTR ERVL 0 563 430 9 840 246 214 18 18 chrX 33548820 33548877 -133101419 + MER68 LTR ERVL 171 227 -336 9 840 365 271 47 0 chrX 33549097 33549204 -133101092 - MER68 LTR ERVL -451 112 1 9 840 194 262 10 125 chrX 33549358 33549454 -133100842 - L4 LINE RTE -616 1413 1329 1 840 198 0 0 0 chrX 33550385 33550407 -133099889 + (A)n Simple_repeat Simple_repeat 1 22 0 1 840 3619 106 10 0 chrX 33552005 33552524 -133097772 - L1_Mus3 LINE L1 -6 6632 6109 1 840 257 311 0 63 chrX 33552546 33552625 -133097671 - ID4_ SINE ID -9 74 1 1 840 25 0 0 0 chrX 33552632 33552657 -133097639 + AT_rich Low_complexity Low_complexity 1 25 0 1 840 21 0 0 0 chrX 33552703 33552724 -133097572 + AT_rich Low_complexity Low_complexity 1 21 0 1 840 799 243 22 28 chrX 33552791 33552973 -133097323 + B3A SINE B2 1 181 -17 1 1 456 73 0 0 chrX 33554375 33554443 -133095853 - L1_Mus3 LINE L1 -11 6627 6560 1 841 245 338 198 9 chrX 33554742 33554954 -133095342 - L3 LINE CR1 -238 4251 4000 1 841 220 311 95 0 chrX 33554964 33555038 -133095258 + PB1D10 SINE Alu 31 111 -6 1 841 315 0 0 0 chrX 33555115 33555150 -133095146 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 841 471 78 0 0 chrX 33555194 33555258 -133095038 + (TA)n Simple_repeat Simple_repeat 1 64 0 1 841 487 286 119 10 chrX 33555417 33555611 -133094685 - B3 SINE B2 0 216 2 1 841 414 260 0 63 chrX 33555625 33555736 -133094560 - PB1D10 SINE Alu -13 104 1 1 841 248 256 106 43 chrX 33557120 33557214 -133093082 - B1F SINE Alu -9 140 41 1 841 378 330 46 74 chrX 33557215 33557323 -133092973 - PB1 SINE Alu -44 105 1 1 841 551 232 155 0 chrX 33557839 33557994 -133092302 - MER5A DNA MER1_type -10 179 1 1 841 6301 113 98 21 chrX 33558420 33559488 -133090808 - Lx4A LINE L1 -2 7056 5907 1 841 27 29 0 0 chrX 33559706 33559740 -133090556 + AT_rich Low_complexity Low_complexity 1 34 0 1 841 280 304 26 29 chrX 33560947 33561035 -133089261 + ID4_ SINE ID 7 92 -60 1 841 388 242 215 8 chrX 33561193 33561314 -133088982 - B1_Mur1 SINE Alu 0 149 4 1 841 1003 246 0 0 chrX 33561316 33561507 -133088789 - B3 SINE B2 -25 191 1 1 841 435 283 38 0 chrX 33561519 33561625 -133088671 - PB1D10 SINE Alu -7 110 1 1 841 217 311 20 91 chrX 33561755 33561774 -133088522 - ID_B1 SINE B4 -128 96 80 1 841 438 20 0 0 chrX 33561774 33561825 -133088471 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 841 223 304 13 92 chrX 33561828 33561904 -133088392 - ID4 SINE ID -9 74 5 1 841 218 259 36 18 chrX 33561922 33561977 -133088319 - ID4_ SINE ID -1 82 27 1 841 338 82 0 0 chrX 33562013 33562074 -133088222 + L1_Mus3 LINE L1 6578 6638 0 1 841 329 333 24 0 chrX 33562192 33562276 -133088020 - PB1D10 SINE Alu -31 86 1 1 841 233 362 0 28 chrX 33562519 33562590 -133087706 - PB1D10 SINE Alu -22 95 27 1 841 23 33 0 0 chrX 33563628 33563658 -133086638 + AT_rich Low_complexity Low_complexity 1 30 0 1 841 221 311 0 0 chrX 33564904 33565010 -133085286 + (TCTCTG)n Simple_repeat Simple_repeat 5 110 0 1 841 180 0 0 0 chrX 33566073 33566093 -133084203 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 841 219 280 109 27 chrX 33566125 33566235 -133084061 + B1F SINE Alu 13 131 -18 1 841 252 355 108 0 chrX 33566346 33566439 -133083857 + RSINE1 SINE B4 46 148 -17 1 841 21 57 0 0 chrX 33566793 33566828 -133083468 + AT_rich Low_complexity Low_complexity 1 35 0 1 841 439 286 44 9 chrX 33566833 33566946 -133083350 + PB1D10 SINE Alu 1 117 0 1 841 248 270 40 10 chrX 33567128 33567229 -133083067 - Charlie24 DNA MER1_type -6 2444 2341 1 841 229 233 9 189 chrX 33567427 33567533 -133082763 + B1_Mm SINE Alu 7 93 -54 1 841 305 257 186 10 chrX 33567445 33567547 -133082749 + ID_B1 SINE B4 99 218 -6 1 841 1127 55 7 7 chrX 33567556 33567704 -133082592 + B1_Mus1 SINE Alu 1 148 0 1 841 513 47 0 0 chrX 33567713 33567777 -133082519 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 841 312 27 0 0 chrX 33567778 33567815 -133082481 + (GA)n Simple_repeat Simple_repeat 1 37 0 1 841 1012 40 8 0 chrX 33567835 33567961 -133082335 + B2_Mm2 SINE B2 27 153 -42 1 841 834 64 0 0 chrX 33567970 33568079 -133082217 + (GAAA)n Simple_repeat Simple_repeat 1 109 0 1 841 22 0 0 0 chrX 33568476 33568498 -133081798 + AT_rich Low_complexity Low_complexity 1 22 0 1 841 26 74 0 0 chrX 33569549 33569603 -133080693 + AT_rich Low_complexity Low_complexity 1 54 0 1 841 366 186 23 144 chrX 33570482 33570614 -133079682 + ID4 SINE ID 1 116 -36 1 841 327 273 0 13 chrX 33570621 33570699 -133079597 + ID4_ SINE ID 5 81 -2 1 841 589 279 39 7 chrX 33570835 33570990 -133079306 - RSINE1 SINE B4 0 165 6 1 841 555 234 0 59 chrX 33571085 33571221 -133079075 - ID_B1 SINE B4 -16 208 81 1 841 1010 54 0 125 chrX 33571670 33571838 -133078458 - B1_Mus2 SINE Alu 0 147 1 1 841 842 186 0 7 chrX 33572100 33572241 -133078055 - B1_Mur2 SINE Alu -9 140 1 1 841 1056 212 19 0 chrX 33572596 33572808 -133077488 - B3 SINE B2 0 216 1 1 841 360 295 71 9 chrX 33572940 33573053 -133077243 + PB1D7 SINE Alu 1 120 0 1 841 387 0 0 0 chrX 33573057 33573100 -133077196 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 841 396 0 0 0 chrX 33573100 33573144 -133077152 + (CATA)n Simple_repeat Simple_repeat 2 45 0 1 841 312 280 0 62 chrX 33573144 33573224 -133077072 + ID4 SINE ID 6 80 -3 1 841 23 0 0 0 chrX 33573371 33573394 -133076902 + AT_rich Low_complexity Low_complexity 1 23 0 1 841 1537 125 0 26 chrX 33573561 33573831 -133076465 - Lx3B LINE L1 -2 6971 6709 1 841 337 363 16 0 chrX 33574688 33574812 -133075484 + B1_Mus1 SINE Alu 2 127 -21 1 841 183 80 0 0 chrX 33575215 33575240 -133075056 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 841 220 146 104 0 chrX 33575590 33575638 -133074658 - B4 SINE B4 -205 87 35 1 841 271 277 15 0 chrX 33575599 33575664 -133074632 - tRNA-Ala-GCY_ tRNA tRNA -8 67 2 1 841 313 324 33 33 chrX 33575673 33575855 -133074441 + L1MB7 LINE L1 5987 6168 -16 1 841 237 268 42 0 chrX 33576153 33576224 -133074072 + (TATATG)n Simple_repeat Simple_repeat 6 79 0 1 841 399 280 81 77 chrX 33576273 33576482 -133073814 - B4 SINE B4 -81 211 2 1 841 252 175 0 0 chrX 33576488 33576551 -133073745 + T-rich Low_complexity Low_complexity 1 63 0 1 841 247 250 0 161 chrX 33576551 33576632 -133073664 - ID4_ SINE ID 0 83 16 1 841 827 20 0 10 chrX 33577114 33577216 -133073080 + (GGAAA)n Simple_repeat Simple_repeat 3 103 0 1 841 1622 152 56 7 chrX 33577901 33578185 -133072111 - MTC LTR MaLR 0 421 124 1 841 1858 250 9 28 chrX 33578197 33578633 -133071663 - Lx5 LINE L1 -8 7042 6615 1 841 477 165 11 23 chrX 33578633 33578720 -133071576 - MTC LTR MaLR -325 96 11 1 841 22 0 0 0 chrX 33579066 33579088 -133071208 + AT_rich Low_complexity Low_complexity 1 22 0 1 841 200 337 69 0 chrX 33579334 33579435 -133070861 - L2 LINE L2 -522 2897 2790 1 841 228 226 36 54 chrX 33579466 33579522 -133070774 + 4.5SRNA scRNA scRNA 29 83 -11 1 841 480 202 0 0 chrX 33579473 33579557 -133070739 + B1_Mur1 SINE Alu 40 123 -26 1 841 296 221 13 0 chrX 33579583 33579660 -133070636 + GA-rich Low_complexity Low_complexity 6 83 0 1 841 192 77 0 0 chrX 33579963 33579989 -133070307 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 841 21 0 0 0 chrX 33580690 33580711 -133069585 + AT_rich Low_complexity Low_complexity 1 21 0 1 841 764 289 8 114 chrX 33581360 33581442 -133068854 + B4 SINE B4 4 69 -223 1 841 924 234 10 38 chrX 33581442 33581651 -133068645 + B3 SINE B2 1 203 -13 1 841 764 289 8 114 chrX 33581651 33581830 -133068466 + B4 SINE B4 70 237 -55 1 841 3677 45 5 0 chrX 33581830 33582433 -133067863 - L1_Mus1 LINE L1 -541 6026 5421 1 841 4181 60 0 2 chrX 33582438 33582959 -133067337 + L1_Mus1 LINE L1 6047 6566 -1 1 841 273 324 49 0 chrX 33583091 33583193 -133067103 + B1_Mus2 SINE Alu 41 147 0 1 841 439 219 0 0 chrX 33583203 33583285 -133067011 + ID4_ SINE ID 2 83 0 1 841 376 181 231 60 chrX 33583311 33583493 -133066803 + MER33 DNA MER1_type 21 233 -91 1 841 439 283 159 38 chrX 33583493 33583625 -133066671 + RSINE1 SINE B4 2 149 -16 1 841 225 0 0 0 chrX 33583627 33583652 -133066644 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 841 269 271 102 31 chrX 33583739 33583911 -133066385 + MIRb SINE MIR 19 207 -61 1 841 332 319 9 26 chrX 33584000 33584116 -133066180 + PB1D10 SINE Alu 2 115 -2 1 841 467 282 0 17 chrX 33584139 33584258 -133066038 + PB1 SINE Alu 3 119 -8 1 841 460 270 98 10 chrX 33584283 33584507 -133065789 + MIR SINE MIR 18 245 -23 1 841 244 289 82 24 chrX 33584707 33584792 -133065504 + PB1 SINE Alu 21 110 -17 1 841 236 53 26 0 chrX 33585605 33585643 -133064653 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 1 841 342 324 45 9 chrX 33586530 33586740 -133063556 + MIR SINE MIR 21 262 0 1 841 22 35 0 0 chrX 33586863 33586892 -133063404 + AT_rich Low_complexity Low_complexity 1 29 0 1 841 643 266 134 11 chrX 33588227 33588413 -133061883 - ID_B1 SINE B4 -12 212 4 1 841 413 252 65 8 chrX 33588481 33588605 -133061691 + B1F SINE Alu 1 131 -18 1 841 332 155 235 12 chrX 33590464 33590549 -133059747 + B1F SINE Alu 1 104 -45 1 841 342 247 21 75 chrX 33591400 33591494 -133058802 + PB1D7 SINE Alu 1 94 -53 1 841 1095 224 15 0 chrX 33592798 33593003 -133057293 + B3 SINE B2 3 210 -6 1 841 696 280 18 32 chrX 33593506 33593724 -133056572 + ID_B1 SINE B4 3 217 -7 2 841 10330 132 23 1 chrX 33593729 33595418 -133054878 + L1_Mm LINE L1 3319 5044 -839 2 841 620 92 26 35 chrX 33595440 33595553 -133054743 + Lx LINE L1 6542 6653 -1 2 841 22 35 0 0 chrX 33595950 33595979 -133054317 + AT_rich Low_complexity Low_complexity 1 29 0 2 841 25 75 0 0 chrX 33596065 33596118 -133054178 + AT_rich Low_complexity Low_complexity 1 53 0 2 841 880 176 7 0 chrX 33596123 33596271 -133054025 - B1_Mur4 SINE Alu 0 150 2 2 841 326 309 18 18 chrX 33596304 33596416 -133053880 + PB1D10 SINE Alu 4 115 -2 2 841 328 274 102 19 chrX 33596445 33596553 -133053743 + B1F SINE Alu 23 139 -10 2 841 26 50 0 0 chrX 33596779 33596819 -133053477 + AT_rich Low_complexity Low_complexity 1 40 0 2 841 217 302 0 0 chrX 33596946 33596999 -133053297 + B1F SINE Alu 20 72 -77 2 841 411 256 7 15 chrX 33597002 33597278 -133053018 + CT-rich Low_complexity Low_complexity 1 273 0 2 841 526 328 51 92 chrX 33597647 33597933 -133052363 - MLT1C LTR MaLR -163 304 32 2 841 937 183 84 28 chrX 33597933 33598147 -133052149 - URR1A DNA MER1_type 0 226 1 2 841 526 328 51 92 chrX 33598147 33598176 -133052120 - MLT1C LTR MaLR -436 31 2 2 841 264 325 0 11 chrX 33599044 33599131 -133051165 + B1F1 SINE Alu 9 94 -55 2 841 1621 70 0 5 chrX 33599231 33599445 -133050851 + L1_Mus2 LINE L1 6354 6566 0 2 841 999 275 207 21 chrX 33600282 33600616 -133049680 + RMER15 LTR ERVL 74 469 -106 2 841 798 232 108 0 chrX 33600647 33600832 -133049464 + B3 SINE B2 2 206 -10 2 841 232 221 176 0 chrX 33600905 33600973 -133049323 - ID4 SINE ID -3 80 1 2 841 226 243 42 28 chrX 33600984 33601056 -133049240 - PB1 SINE Alu -7 120 48 2 841 23 33 0 0 chrX 33601603 33601633 -133048663 + AT_rich Low_complexity Low_complexity 1 30 0 2 841 36 23 0 0 chrX 33601740 33601783 -133048513 + AT_rich Low_complexity Low_complexity 1 43 0 2 841 1603 197 139 16 chrX 33601787 33602153 -133048143 - MTD LTR MaLR -8 411 1 2 841 338 284 102 17 chrX 33603432 33603550 -133046746 + MER2 DNA MER2_type 1 128 -217 2 841 288 221 0 93 chrX 33603548 33603623 -133046673 - B1F SINE Alu 0 149 82 2 841 1282 261 178 34 chrX 33603623 33604118 -133046178 - RMER15 LTR ERVL 0 575 10 2 841 343 274 147 0 chrX 33604270 33604365 -133045931 - PB1D10 SINE Alu -5 112 4 2 841 430 285 25 25 chrX 33604372 33604534 -133045762 + MER2 DNA MER2_type 115 276 -69 2 841 669 58 0 0 chrX 33605205 33605291 -133045005 + (TTCC)n Simple_repeat Simple_repeat 3 88 0 2 841 189 0 0 0 chrX 33605545 33605566 -133044730 + (CTG)n Simple_repeat Simple_repeat 3 23 0 2 841 262 229 0 0 chrX 33605574 33605622 -133044674 - ID4_ SINE ID -13 70 23 2 841 551 274 8 124 chrX 33605720 33605962 -133044334 + B3 SINE B2 3 216 0 2 841 434 292 68 76 chrX 33605987 33606224 -133044072 + L1M5 LINE L1 5523 5757 -367 2 841 399 336 22 22 chrX 33606271 33606408 -133043888 + B1F SINE Alu 12 148 -1 2 841 22 56 0 0 chrX 33606500 33606536 -133043760 + AT_rich Low_complexity Low_complexity 1 36 0 2 841 802 211 0 17 chrX 33609463 33609618 -133040678 - B1_Mur1 SINE Alu 0 149 1 2 841 698 271 8 0 chrX 33610213 33610346 -133039950 - RSINE1 SINE B4 -29 136 3 2 841 736 164 35 21 chrX 33610627 33610770 -133039526 + B1_Mur3 SINE Alu 5 149 0 2 841 720 248 162 35 chrX 33610818 33611077 -133039219 + B4A SINE B4 1 292 0 2 841 549 236 102 31 chrX 33611522 33611649 -133038647 - ID_B1 SINE B4 -1 223 88 2 841 415 308 40 34 chrX 33611687 33611835 -133038461 + B1F SINE Alu 1 149 0 2 841 394 121 0 29 chrX 33612214 33612282 -133038014 - ORR1B2 LTR MaLR -52 315 250 2 841 868 222 64 6 chrX 33612416 33612588 -133037708 - B4A SINE B4 -72 220 39 2 841 899 205 202 30 chrX 33614042 33614357 -133035939 - MTD LTR MaLR 0 421 20 2 841 4944 61 104 33 chrX 33614362 33615022 -133035274 + L1_Mus2 LINE L1 5860 6566 0 2 841 279 0 0 0 chrX 33615160 33615191 -133035105 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 841 660 183 82 22 chrX 33615209 33615343 -133034953 - B3A SINE B2 -53 145 4 2 841 234 0 0 0 chrX 33616728 33616754 -133033542 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2 841 180 77 0 0 chrX 33617563 33617589 -133032707 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 841 666 68 0 0 chrX 33617589 33617676 -133032620 + (GA)n Simple_repeat Simple_repeat 1 88 0 2 841 1513 277 114 34 chrX 33618031 33618774 -133031522 - L1MB7 LINE L1 -16 6168 5366 2 841 257 352 11 21 chrX 33618901 33618994 -133031302 - PB1 SINE Alu -2 125 34 2 841 567 242 113 62 chrX 33619194 33619485 -133030811 - L1MB7 LINE L1 -1374 4772 4467 2 841 767 244 56 17 chrX 33619506 33619685 -133030611 - B3 SINE B2 -6 210 25 2 841 246 219 73 0 chrX 33619753 33619835 -133030461 - L1MB7 LINE L1 -1736 4410 4323 2 841 872 148 56 7 chrX 33619928 33620071 -133030225 - B1_Mur4 SINE Alu 0 150 1 2 841 361 271 122 25 chrX 33620071 33620266 -133030030 - L1MD LINE L1 -1957 4189 3974 2 841 586 257 71 108 chrX 33620761 33620781 -133029515 + B4 SINE B4 62 83 -209 2 841 698 90 0 0 chrX 33620781 33620870 -133029426 + 4.5SRNA scRNA scRNA 3 91 -3 2 841 1119 63 0 0 chrX 33620875 33621018 -133029278 + B1_Mus1 SINE Alu 6 148 0 2 841 586 257 71 108 chrX 33621018 33621089 -133029207 + B4 SINE B4 89 292 0 2 841 234 0 0 0 chrX 33621094 33621120 -133029176 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 841 217 314 0 41 chrX 33621457 33621530 -133028766 + MIR SINE MIR 101 170 -92 2 841 881 291 33 55 chrX 33621574 33621847 -133028449 + B4 SINE B4 8 274 -18 2 841 252 0 0 0 chrX 33622147 33622175 -133028121 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 841 375 282 89 18 chrX 33622484 33622596 -133027700 - PB1D7 SINE Alu 0 120 1 2 841 1039 146 154 45 chrX 33623354 33623555 -133026741 + URR1B DNA MER1_type 1 223 -2 2 841 619 287 62 19 chrX 33623574 33623734 -133026562 + MER20 DNA MER1_type 3 169 -50 2 841 600 203 99 124 chrX 33623750 33623952 -133026344 + B3A SINE B2 2 198 0 2 841 370 169 0 33 chrX 33624385 33624446 -133025850 + B1_Mus2 SINE Alu 1 59 -88 2 841 713 111 0 9 chrX 33624498 33624607 -133025689 + B1_Mur4 SINE Alu 43 150 0 2 841 365 252 79 20 chrX 33624873 33624974 -133025322 + PB1D10 SINE Alu 4 110 -7 2 841 235 262 45 90 chrX 33625176 33625243 -133025053 + ID4_ SINE ID 9 72 -11 2 841 1009 133 267 0 chrX 33625283 33625478 -133024818 + ORR1B2 LTR MaLR 2 248 -119 2 841 734 116 9 9 chrX 33625528 33625641 -133024655 - ORR1B2 LTR MaLR -8 359 247 2 841 444 236 121 38 chrX 33625667 33625799 -133024497 + B1F1 SINE Alu 1 143 -6 2 841 334 234 105 2 chrX 33625800 33625924 -133024372 + L1M LINE L1 5321 5461 -710 2 841 893 27 9 0 chrX 33626044 33626156 -133024140 + (GAAAA)n Simple_repeat Simple_repeat 5 117 0 2 841 366 352 43 16 chrX 33626669 33626854 -133023442 - MIRb SINE MIR -35 233 44 2 841 603 268 35 0 chrX 33627338 33627480 -133022816 - B1F SINE Alu -2 147 1 2 841 216 275 14 28 chrX 33627553 33627624 -133022672 - BC1_Mm scRNA scRNA -60 92 23 2 841 233 241 19 0 chrX 33627573 33627627 -133022669 - ID SINE ID -149 75 21 2 841 1022 264 76 56 chrX 33627705 33628062 -133022234 - MTD LTR MaLR -39 380 17 2 841 198 0 0 0 chrX 33628076 33628098 -133022198 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 841 655 263 95 8 chrX 33628098 33628362 -133021934 - L1MA7 LINE L1 -1 6290 6004 2 841 1328 239 107 32 chrX 33628523 33628869 -133021427 - MTEa LTR MaLR -3 376 5 2 841 618 303 59 18 chrX 33629176 33629398 -133020898 - Lx8 LINE L1 -2 7471 7241 2 841 2471 247 99 10 chrX 33629484 33630110 -133020186 - Lx8 LINE L1 -381 7092 6411 2 841 33 73 0 0 chrX 33630292 33630360 -133019936 + AT_rich Low_complexity Low_complexity 1 68 0 2 841 717 272 12 0 chrX 33630373 33630546 -133019750 - Lx8 LINE L1 -1102 6371 6197 2 841 894 251 56 5 chrX 33630550 33630746 -133019550 - B3 SINE B2 -10 206 1 2 841 339 184 220 0 chrX 33630749 33630858 -133019438 - MER2 DNA MER2_type -127 218 86 2 841 552 244 43 9 chrX 33630870 33630986 -133019310 - B1F SINE Alu -29 120 1 2 841 269 310 0 0 chrX 33631265 33631336 -133018960 + ID_B1 SINE B4 127 197 -27 2 841 439 335 6 54 chrX 33631706 33631873 -133018423 - MTEb LTR MaLR -14 365 207 2 841 386 246 0 154 chrX 33631903 33632052 -133018244 - PB1 SINE Alu 0 127 2 2 841 468 319 81 31 chrX 33632065 33632388 -133017908 + L2 LINE L2 2470 2808 -611 2 841 339 315 0 0 chrX 33632440 33632513 -133017783 - B4 SINE B4 -2 290 218 2 841 325 202 74 25 chrX 33632620 33632701 -133017595 - B4A SINE B4 -59 233 149 2 841 381 351 62 50 chrX 33632714 33632972 -133017324 + MLT1J LTR MaLR 252 512 0 2 841 2349 132 3 21 chrX 33633048 33633426 -133016870 - L1_Mus4 LINE L1 -841 5042 4672 2 841 7790 100 19 5 chrX 33633433 33634964 -133015332 + L1_Mus4 LINE L1 5092 6636 0 2 841 23 0 0 0 chrX 33635040 33635063 -133015233 + AT_rich Low_complexity Low_complexity 1 23 0 2 841 554 279 21 0 chrX 33635069 33635209 -133015087 + ID_B1 SINE B4 82 224 0 2 841 761 141 0 15 chrX 33635242 33635379 -133014917 + CT-rich Low_complexity Low_complexity 1 135 0 2 841 831 204 14 0 chrX 33635379 33635521 -133014775 - B1_Mur2 SINE Alu -1 148 5 2 841 1237 75 0 0 chrX 33635560 33635706 -133014590 + B1_Mus1 SINE Alu 2 147 -1 2 841 1110 96 0 0 chrX 33635723 33635858 -133014438 + B1_Mus2 SINE Alu 1 135 -12 2 841 450 0 0 0 chrX 33635858 33635908 -133014388 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 3 841 680 325 20 8 chrX 33636075 33636320 -133013976 - MIR SINE MIR 0 262 15 3 841 421 182 0 0 chrX 33636777 33636843 -133013453 + ID4 SINE ID 5 70 -13 3 841 329 306 94 0 chrX 33636895 33637055 -133013241 - L1MB8 LINE L1 -149 6029 5855 3 841 251 315 0 14 chrX 33637083 33637157 -133013139 - ID4 SINE ID -2 81 9 3 841 660 262 128 43 chrX 33637200 33637387 -133012909 + B3 SINE B2 1 203 -13 3 841 408 40 0 0 chrX 33637434 33637484 -133012812 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 3 841 797 215 0 26 chrX 33637484 33637637 -133012659 - B1_Mur1 SINE Alu 0 149 1 3 841 865 227 60 5 chrX 33637715 33637914 -133012382 - ID_B1 SINE B4 -9 215 6 3 841 873 294 82 26 chrX 33637986 33638244 -133012052 - L1MB3 LINE L1 -298 5885 5607 3 841 297 338 0 0 chrX 33638244 33638324 -133011972 - ID4_ SINE ID 0 83 4 3 841 873 294 82 26 chrX 33638324 33638453 -133011843 - L1MB3 LINE L1 -577 5606 5476 3 841 385 261 261 0 chrX 33638496 33638607 -133011689 - B1F2 SINE Alu -9 140 1 3 841 248 244 48 24 chrX 33638664 33638748 -133011548 - L1MB3 LINE L1 -693 5490 5405 3 841 450 0 0 0 chrX 33639082 33639132 -133011164 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 841 857 326 55 15 chrX 33639171 33639445 -133010851 - B4A SINE B4 -6 286 2 3 841 3868 159 86 11 chrX 33639627 33640293 -133010003 + RMER6D LTR ERVK 1 716 -4 3 841 213 178 0 0 chrX 33640966 33641011 -133009285 + (CATA)n Simple_repeat Simple_repeat 4 48 0 3 841 420 264 129 50 chrX 33641816 33642321 -133007975 + L1MEe LINE L1 2064 2597 -3549 3 841 491 260 24 31 chrX 33642343 33642470 -133007826 + B1F SINE Alu 24 149 0 3 841 570 184 39 0 chrX 33642468 33642571 -133007725 + B1_Mur2 SINE Alu 43 149 0 3 841 207 0 0 0 chrX 33642589 33642612 -133007684 + (CCAA)n Simple_repeat Simple_repeat 2 24 0 3 841 373 335 26 19 chrX 33642614 33642769 -133007527 + L1MEe LINE L1 2615 2770 -3376 3 841 360 264 19 23 chrX 33643423 33643538 -133006758 + B1F SINE Alu 1 120 0 3 841 202 29 0 54 chrX 33643545 33643582 -133006714 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 3 841 986 95 0 7 chrX 33644189 33644338 -133005958 + (TCTCC)n Simple_repeat Simple_repeat 2 149 0 3 841 427 33 0 32 chrX 33644460 33644523 -133005773 + (TTA)n Simple_repeat Simple_repeat 3 63 0 3 841 22 0 0 0 chrX 33645028 33645050 -133005246 + AT_rich Low_complexity Low_complexity 1 22 0 3 841 307 232 36 12 chrX 33645053 33645136 -133005160 + CT-rich Low_complexity Low_complexity 1 85 0 3 841 427 293 23 124 chrX 33645473 33645691 -133004605 + ID_B1 SINE B4 4 199 -25 3 841 663 205 8 0 chrX 33645581 33645698 -133004598 + B1_Mur2 SINE Alu 11 128 -21 3 841 420 250 62 71 chrX 33645727 33645839 -133004457 + ID_B1 SINE B4 63 173 -51 3 841 254 51 0 49 chrX 33645847 33645888 -133004408 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 3 841 788 170 88 7 chrX 33645889 33646025 -133004271 - B1_Mus2 SINE Alu 0 147 1 3 841 441 275 0 160 chrX 33646149 33646234 -133004062 - B4 SINE B4 0 292 229 3 841 755 240 187 0 chrX 33646234 33646405 -133003891 - B3 SINE B2 -9 207 5 3 841 441 275 0 160 chrX 33646405 33646488 -133003808 - B4 SINE B4 -64 228 151 3 841 640 195 331 6 chrX 33646544 33646704 -133003592 - B3 SINE B2 0 216 5 3 841 521 313 22 58 chrX 33647423 33647647 -133002649 - MER20 DNA MER1_type -2 217 2 3 841 477 267 43 22 chrX 33647986 33648124 -133002172 + B1F SINE Alu 1 141 -8 3 841 360 0 0 0 chrX 33648337 33648377 -133001919 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 841 283 254 14 29 chrX 33649509 33649578 -133000718 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 3 841 853 297 134 58 chrX 33649897 33649995 -133000301 + MLT1D LTR MaLR 34 127 -378 3 841 708 241 296 26 chrX 33649995 33650056 -133000240 - B4A SINE B4 0 292 237 3 841 441 0 0 0 chrX 33650056 33650105 -133000191 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 841 708 241 296 26 chrX 33650105 33650273 -133000023 - B4A SINE B4 -56 236 3 3 841 853 297 134 58 chrX 33650273 33650303 -132999993 + MLT1D LTR MaLR 128 157 -348 3 841 3827 43 2 0 chrX 33650303 33650740 -132999556 - L1Md_F2 LINE L1 -4 6578 6141 3 841 853 297 134 58 chrX 33650740 33651042 -132999254 + MLT1D LTR MaLR 158 497 -8 3 841 466 244 0 0 chrX 33651188 33651274 -132999022 - RSINE1 SINE B4 0 165 80 3 841 208 211 0 0 chrX 33651310 33651348 -132998948 + C-rich Low_complexity Low_complexity 1 38 0 3 841 208 284 30 0 chrX 33651713 33651780 -132998516 - MIRc SINE MIR -196 72 4 3 841 288 0 0 0 chrX 33653126 33653158 -132997138 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 841 315 0 0 0 chrX 33653160 33653195 -132997101 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 841 224 321 125 27 chrX 33653276 33653550 -132996746 - L2b LINE L2 -10 3416 3111 3 841 309 109 0 0 chrX 33654843 33654889 -132995407 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 841 605 284 0 0 chrX 33655750 33655891 -132994405 - B1F SINE Alu 0 149 9 3 841 287 290 39 110 chrX 33655753 33655908 -132994388 - B4A SINE B4 -68 224 81 3 841 383 276 165 0 chrX 33655944 33656071 -132994225 - MIR SINE MIR -113 149 2 3 841 239 239 0 0 chrX 33656223 33656269 -132994027 - ID4_ SINE ID -4 79 34 3 841 287 222 252 0 chrX 33656274 33656373 -132993923 + Tigger5 DNA MER2_type 2213 2336 -70 3 841 247 277 77 0 chrX 33656424 33656489 -132993807 - ID4_ SINE ID -12 71 2 3 841 539 259 20 40 chrX 33656504 33656653 -132993643 - B1F SINE Alu 0 149 4 3 841 1359 273 108 44 chrX 33656724 33657622 -132992674 - L1M4c LINE L1 -2163 4481 3536 3 841 599 221 0 42 chrX 33657663 33657781 -132992515 - ID_B1 SINE B4 -8 216 104 3 841 226 302 0 0 chrX 33657794 33657847 -132992449 + polypyrimidine Low_complexity Low_complexity 3 55 0 3 841 626 279 40 47 chrX 33657852 33658055 -132992241 - B4 SINE B4 -34 258 59 3 841 293 272 114 0 chrX 33658071 33658185 -132992111 - L1M4c LINE L1 -4956 1586 1460 3 841 492 257 136 45 chrX 33658201 33658356 -132991940 - Lx8 LINE L1 -201 7272 7104 3 841 261 0 0 0 chrX 33658398 33658427 -132991869 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 3 841 3142 254 60 13 chrX 33658933 33659756 -132990540 - Lx8 LINE L1 -374 7099 6239 3 841 616 273 30 0 chrX 33659887 33660019 -132990277 - RSINE1 SINE B4 -27 138 3 3 841 425 255 62 21 chrX 33660245 33660389 -132989907 - L1M4c LINE L1 -5174 1472 1323 3 841 459 233 63 55 chrX 33660408 33660535 -132989761 - B1F1 SINE Alu -21 128 1 3 841 389 208 284 11 chrX 33660535 33660725 -132989571 - L1M4c LINE L1 -5308 1338 1097 3 841 236 250 0 0 chrX 33660741 33660781 -132989515 + ID4 SINE ID 8 47 -36 3 841 948 307 47 37 chrX 33660906 33661336 -132988960 - Lx8 LINE L1 0 7473 7040 3 841 1140 297 78 46 chrX 33661444 33661878 -132988418 - L1M4c LINE L1 -5802 844 397 3 841 367 305 15 0 chrX 33661954 33662066 -132988230 - B1F SINE Alu 0 120 6 3 841 219 114 0 0 chrX 33662151 33662186 -132988110 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 841 462 215 90 36 chrX 33662189 33662300 -132987996 - B1F SINE Alu -10 139 23 3 841 247 260 119 50 chrX 33662613 33662714 -132987582 + B1F SINE Alu 42 149 0 3 841 275 0 0 28 chrX 33662891 33662927 -132987369 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 841 1787 134 134 0 chrX 33662928 33663256 -132987040 - ORR1B1 LTR MaLR -22 372 1 3 841 391 308 52 10 chrX 33663351 33663466 -132986830 - B1F1 SINE Alu -19 130 11 3 841 336 273 26 13 chrX 33663794 33663872 -132986424 - ID4_ SINE ID -4 79 1 3 841 397 248 55 9 chrX 33663916 33664026 -132986270 - PB1D10 SINE Alu 0 117 3 3 841 320 256 36 58 chrX 33664026 33664085 -132986211 - B4A SINE B4 -204 88 26 3 841 182 62 31 0 chrX 33664298 33664330 -132985966 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 3 841 624 215 8 47 chrX 33664489 33664616 -132985680 + B1_Mur1 SINE Alu 21 142 -7 3 841 284 241 189 74 chrX 33664743 33664833 -132985463 + MER2 DNA MER2_type 91 170 -175 3 841 2946 130 77 21 chrX 33664833 33665312 -132984984 + Lx2B LINE L1 6490 6995 -5 3 841 284 241 189 74 chrX 33665312 33665369 -132984927 + MER2 DNA MER2_type 171 255 -90 3 841 476 54 0 13 chrX 33665443 33665518 -132984778 - L1Md_F3 LINE L1 0 6584 6511 3 841 21 36 0 0 chrX 33665518 33665546 -132984750 + AT_rich Low_complexity Low_complexity 1 28 0 3 841 237 308 51 13 chrX 33665563 33665642 -132984654 + ID4 SINE ID 2 83 0 3 841 491 252 55 0 chrX 33665668 33665795 -132984501 + ID_B1 SINE B4 89 222 -2 3 841 545 308 19 12 chrX 33665914 33666075 -132984221 - RSINE1 SINE B4 0 165 4 3 841 236 337 0 10 chrX 33666077 33666156 -132984140 + T-rich Low_complexity Low_complexity 21 98 0 3 841 464 122 0 24 chrX 33666156 33666240 -132984056 - Lx2B LINE L1 -1 6999 6918 3 841 236 337 0 10 chrX 33666240 33666256 -132984040 + T-rich Low_complexity Low_complexity 5 20 0 3 841 624 186 124 0 chrX 33666259 33666388 -132983908 - B1F SINE Alu 0 149 5 3 841 548 268 8 0 chrX 33668256 33668383 -132981913 - ID_B1 SINE B4 -8 216 89 3 841 23 54 0 0 chrX 33668392 33668429 -132981867 + AT_rich Low_complexity Low_complexity 1 37 0 3 841 1107 75 0 14 chrX 33668623 33668758 -132981538 + B1_Mus1 SINE Alu 1 135 -13 3 841 185 0 40 0 chrX 33668758 33668783 -132981513 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 3 841 1107 75 0 14 chrX 33668783 33668795 -132981501 + B1_Mus1 SINE Alu 136 146 -2 3 841 245 333 14 0 chrX 33668807 33668879 -132981417 - ID4_ SINE ID -7 76 4 3 841 251 238 84 36 chrX 33669150 33669233 -132981063 - MamRep605 Unknown Unknown -308 568 482 3 841 525 241 6 108 chrX 33670263 33670421 -132979875 - MER20 DNA MER1_type -39 180 39 3 841 282 56 0 0 chrX 33670980 33671016 -132979280 + (TCCC)n Simple_repeat Simple_repeat 4 39 0 3 841 466 261 107 47 chrX 33671320 33671489 -132978807 + MIR SINE MIR 15 193 -69 3 841 424 252 16 13 chrX 33671905 33672005 -132978291 + AluG_3 SINE Alu 137 224 -87 3 841 517 268 63 0 chrX 33672044 33672171 -132978125 + B1F1 SINE Alu 10 144 -5 3 841 515 248 46 46 chrX 33672302 33672454 -132977842 + B3A SINE B2 34 185 -13 4 841 492 211 171 14 chrX 33672454 33672665 -132977631 + Lx9 LINE L1 7399 7642 -2 4 841 780 190 0 27 chrX 33673183 33673329 -132976967 - B1_Mur3 SINE Alu -7 142 1 4 841 668 180 101 8 chrX 33673380 33673509 -132976787 + B1_Mur2 SINE Alu 2 142 -7 4 841 262 273 0 0 chrX 33673521 33673576 -132976720 - ID4 SINE ID -28 55 1 4 841 813 21 0 0 chrX 33673670 33673765 -132976531 + (GGAAA)n Simple_repeat Simple_repeat 3 97 0 4 841 407 328 120 8 chrX 33673765 33673882 -132976414 + RSINE1 SINE B4 5 134 -31 4 841 207 0 0 0 chrX 33673979 33674002 -132976294 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 4 841 474 243 120 80 chrX 33674177 33674486 -132975810 - L1MD2 LINE L1 -121 6238 5901 4 841 426 241 58 33 chrX 33674579 33674699 -132975597 - B1F SINE Alu 0 149 27 4 841 236 272 47 37 chrX 33674788 33674895 -132975401 - L1MA6 LINE L1 -26 6274 6167 4 841 1845 218 35 27 chrX 33674995 33675400 -132974896 - MTD LTR MaLR -11 408 1 4 841 263 306 66 54 chrX 33675569 33675735 -132974561 + Charlie16a DNA MER1_type 33 200 -142 4 841 284 216 0 26 chrX 33675746 33675822 -132974474 - L1MA5 LINE L1 -3 6297 6224 4 841 567 29 0 0 chrX 33676074 33676143 -132974153 + (CTTA)n Simple_repeat Simple_repeat 3 71 0 4 841 475 318 127 26 chrX 33676396 33676664 -132973632 + L2c LINE L2 3074 3368 -19 4 841 2033 193 16 5 chrX 33677486 33677856 -132972440 - ORR1D1 LTR MaLR 0 374 1 4 841 333 270 113 35 chrX 33678046 33678161 -132972135 + MIR SINE MIR 103 226 -36 4 841 195 100 0 0 chrX 33678432 33678462 -132971834 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 4 841 565 254 43 41 chrX 33678897 33679048 -132971248 + ID_B1 SINE B4 89 246 -46 4 841 270 125 0 0 chrX 33679406 33679454 -132970842 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 841 22 0 0 0 chrX 33679518 33679540 -132970756 + AT_rich Low_complexity Low_complexity 1 22 0 4 841 1227 48 0 0 chrX 33680020 33680167 -132970129 + B1_Mus2 SINE Alu 1 147 0 4 841 705 245 0 0 chrX 33680207 33680350 -132969946 + B1_Mur3 SINE Alu 7 149 0 4 841 868 278 71 36 chrX 33680475 33680755 -132969541 + B4A SINE B4 1 290 -2 4 841 260 377 13 0 chrX 33681753 33681764 -132968532 - ID2 SINE ID 0 83 7 4 841 270 354 15 0 chrX 33681764 33681829 -132968467 - tRNA-Ala-GCY_ tRNA tRNA -9 66 1 4 841 1731 211 129 0 chrX 33681944 33682309 -132967987 - MTD LTR MaLR -5 414 3 4 841 383 258 73 139 chrX 33682991 33683073 -132967223 - L1MB2 LINE L1 -60 6111 6057 4 841 548 207 17 8 chrX 33683073 33683190 -132967106 - PB1D9 SINE Alu -1 119 2 4 841 383 258 73 139 chrX 33683190 33683409 -132966887 - L1MB2 LINE L1 -115 6056 5830 4 841 508 261 116 34 chrX 33685067 33685214 -132965082 + RSINE1 SINE B4 5 163 -2 4 841 606 63 0 0 chrX 33685218 33685297 -132964999 + (CA)n Simple_repeat Simple_repeat 1 79 0 4 842 675 179 204 11 chrX 33686153 33686334 -132963962 + B3 SINE B2 1 216 0 4 842 733 168 0 46 chrX 33686384 33686515 -132963781 - B1_Mus1 SINE Alu -21 127 3 4 842 784 166 278 0 chrX 33686546 33686715 -132963581 - B3 SINE B2 0 216 1 4 842 343 179 66 24 chrX 33687522 33687688 -132962608 + (TA)n Simple_repeat Simple_repeat 2 174 0 4 842 240 333 51 0 chrX 33687776 33687854 -132962442 - ID4 SINE ID 0 83 2 4 842 349 279 153 29 chrX 33687929 33688099 -132962197 + MIR SINE MIR 72 262 0 4 842 565 200 220 39 chrX 33688122 33688304 -132961992 + B3 SINE B2 2 216 0 4 842 25 0 0 0 chrX 33688313 33688338 -132961958 + AT_rich Low_complexity Low_complexity 1 25 0 4 842 672 218 0 16 chrX 33688418 33688544 -132961752 - B3 SINE B2 -91 125 2 4 842 24 0 0 0 chrX 33688602 33688626 -132961670 + AT_rich Low_complexity Low_complexity 1 24 0 4 842 1148 55 0 14 chrX 33689234 33689381 -132960915 + B1_Mm SINE Alu 2 146 -1 4 842 254 385 21 14 chrX 33689457 33689602 -132960694 + L3 LINE CR1 3517 3662 -827 4 842 1061 110 0 0 chrX 33689822 33689968 -132960328 + B1_Mus1 SINE Alu 3 148 0 4 842 251 294 91 169 chrX 33690411 33690458 -132959838 - MLT1F2 LTR MaLR 0 548 505 4 842 393 279 48 48 chrX 33690458 33690605 -132959691 + B1F SINE Alu 3 149 0 4 842 334 294 92 167 chrX 33690605 33690804 -132959492 - MLT1F2 LTR MaLR -24 629 326 4 842 550 264 198 18 chrX 33690814 33691077 -132959219 + MLT1C LTR MaLR 171 505 0 4 842 763 314 35 45 chrX 33691087 33691374 -132958922 - MLT1F2 LTR MaLR -276 284 1 4 842 334 359 13 46 chrX 33692462 33692614 -132957682 + RSINE1 SINE B4 9 155 -10 4 842 259 282 62 25 chrX 33692672 33692752 -132957544 + ID4_ SINE ID 1 83 0 4 842 211 264 0 0 chrX 33692903 33692956 -132957340 + PB1D7 SINE Alu 7 59 -61 4 842 444 337 84 83 chrX 33693244 33693761 -132956535 - L2a LINE L2 -184 3242 2693 4 842 838 193 0 0 chrX 33693761 33693901 -132956395 - B1_Mur1 SINE Alu -5 144 5 4 842 444 356 124 71 chrX 33693901 33694249 -132956047 - L2a LINE L2 -727 2692 2332 4 842 449 306 73 0 chrX 33694495 33694619 -132955677 + ID_B1 SINE B4 88 220 -4 4 842 189 0 0 0 chrX 33694640 33694661 -132955635 + (A)n Simple_repeat Simple_repeat 1 21 0 4 842 295 279 0 37 chrX 33694676 33694758 -132955538 - ID4_ SINE ID -2 81 3 4 842 281 330 92 10 chrX 33694772 33694870 -132955426 - PB1D10 SINE Alu -11 106 1 4 842 269 0 56 0 chrX 33694933 33694969 -132955327 + (TTTTA)n Simple_repeat Simple_repeat 1 38 0 4 842 878 182 0 0 chrX 33694969 33695106 -132955190 - B1_Mur1 SINE Alu -12 137 1 4 842 835 142 37 0 chrX 33695273 33695407 -132954889 - B1_Mur3 SINE Alu 0 149 11 4 842 1088 262 26 6 chrX 33695675 33696020 -132954276 - L1MB4 LINE L1 -10 6170 5819 4 842 634 324 16 32 chrX 33696862 33697114 -132953182 + MIR SINE MIR 5 252 -10 4 842 290 288 43 35 chrX 33697415 33697530 -132952766 + MER5A DNA MER1_type 44 159 -30 4 842 432 333 39 39 chrX 33697600 33697699 -132952597 - MIR SINE MIR -10 252 155 4 842 1241 264 37 32 chrX 33697699 33698074 -132952222 + MTE2a LTR MaLR 1 377 -2 4 842 432 333 39 39 chrX 33698074 33698177 -132952119 - MIR SINE MIR -108 154 50 4 842 1399 187 127 21 chrX 33698703 33699041 -132951255 + ORR1D1 LTR MaLR 1 374 0 4 842 1144 82 0 0 chrX 33699084 33699231 -132951065 + B1_Mus2 SINE Alu 1 147 0 4 842 635 179 9 18 chrX 33699374 33699488 -132950808 - B1_Mur1 SINE Alu -2 147 35 4 842 1192 48 7 0 chrX 33699707 33699853 -132950443 + B1_Mus2 SINE Alu 1 147 0 4 842 274 212 89 20 chrX 33700411 33700512 -132949784 + L1ME4a LINE L1 6015 6122 -2 4 842 189 159 0 0 chrX 33701043 33701087 -132949209 + A-rich Low_complexity Low_complexity 2 45 0 4 842 445 259 40 61 chrX 33701098 33701246 -132949050 - RSINE1 SINE B4 -19 146 2 4 842 233 160 20 0 chrX 33701969 33702019 -132948277 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 4 842 351 298 111 59 chrX 33703302 33703609 -132946687 - Lx8 LINE L1 -1306 6167 5845 4 842 246 222 19 0 chrX 33703664 33703718 -132946578 + Lx7 LINE L1 7047 7101 -595 4 842 663 37 0 0 chrX 33703786 33703868 -132946428 + (CA)n Simple_repeat Simple_repeat 1 82 0 4 842 387 294 0 0 chrX 33704938 33705047 -132945249 - PB1D9 SINE Alu -10 110 2 4 842 21 36 0 0 chrX 33705259 33705287 -132945009 + AT_rich Low_complexity Low_complexity 1 28 0 4 842 252 221 0 0 chrX 33705738 33705815 -132944481 + CT-rich Low_complexity Low_complexity 2 78 0 4 842 340 278 34 25 chrX 33705922 33706040 -132944256 + L1MC4a LINE L1 5761 5879 -2003 4 842 879 68 0 17 chrX 33706327 33706447 -132943849 - B1_Mus1 SINE Alu -2 146 29 4 842 195 42 0 0 chrX 33706652 33706676 -132943620 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 842 1152 151 42 0 chrX 33707018 33707210 -132943086 + URR1B DNA MER1_type 25 224 -1 4 842 459 232 41 34 chrX 33707080 33707227 -132943069 - CYRA11_Mm Unknown Y-chromosome -314 303 156 4 842 908 279 78 9 chrX 33707230 33707574 -132942722 - L1ME1 LINE L1 -208 5971 5604 4 842 246 324 14 0 chrX 33708025 33708099 -132942197 - MER58A DNA MER1_type -145 79 5 4 842 186 43 0 0 chrX 33708100 33708123 -132942173 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 842 23 78 0 0 chrX 33711329 33711380 -132938916 + AT_rich Low_complexity Low_complexity 1 51 0 4 842 958 273 9 13 chrX 33711990 33712220 -132938076 - B4A SINE B4 -4 288 60 4 842 4327 69 1 10 chrX 33712393 33713148 -132937148 - L1_Mus1 LINE L1 -557 6010 5260 4 842 4350 37 40 6 chrX 33713148 33713698 -132936598 + L1_Mus1 LINE L1 5998 6566 -1 4 842 198 103 0 0 chrX 33713785 33713814 -132936482 + (TATATG)n Simple_repeat Simple_repeat 1 29 0 4 842 504 259 30 0 chrX 33713817 33713948 -132936348 - B1F SINE Alu -14 135 1 4 842 487 274 33 147 chrX 33714005 33714189 -132936107 + RSINE1 SINE B4 3 165 0 4 842 248 183 50 0 chrX 33714241 33714301 -132935995 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 842 5310 135 41 15 chrX 33714385 33715331 -132934965 - Lx2B LINE L1 -20 6980 6010 4 842 205 407 72 30 chrX 33715510 33715677 -132934619 - MIRb SINE MIR -60 208 35 4 842 225 284 29 15 chrX 33715996 33716064 -132934232 + MIR3 SINE MIR 88 156 -52 4 842 266 291 12 12 chrX 33716154 33716234 -132934062 + MIR3 SINE MIR 81 160 -48 4 842 229 161 101 90 chrX 33716552 33716641 -132933655 - RLTR13D3 LTR ERVK -83 1031 942 4 842 286 263 47 110 chrX 33717137 33717246 -132933050 + MLT1E3 LTR MaLR 506 581 -43 4 842 381 335 22 28 chrX 33717595 33717773 -132932523 - HAL1 LINE L1 -517 1990 1814 5 842 33 56 0 0 chrX 33718179 33718233 -132932063 + AT_rich Low_complexity Low_complexity 1 54 0 5 842 402 260 0 16 chrX 33718406 33718531 -132931765 - HAL1 LINE L1 -1260 1247 1125 5 842 825 99 0 0 chrX 33718907 33719028 -132931268 + (TTCC)n Simple_repeat Simple_repeat 4 124 0 5 842 233 333 14 0 chrX 33719456 33719528 -132930768 + ID4_ SINE ID 2 74 -9 5 842 349 256 13 0 chrX 33719908 33719986 -132930310 + B4 SINE B4 1 79 -213 5 842 887 288 16 28 chrX 33719982 33720232 -132930064 + B4 SINE B4 46 292 0 5 842 328 309 33 42 chrX 33720595 33720808 -132929488 - L1MC5 LINE L1 -45 7916 7706 5 842 333 323 10 0 chrX 33720837 33720933 -132929363 + PB1 SINE Alu 6 102 -25 5 842 1497 44 11 0 chrX 33720981 33721164 -132929132 + B2_Mm1t SINE B2 2 186 -7 5 842 231 203 15 30 chrX 33721199 33721265 -132929031 - L1MC5 LINE L1 -294 7667 7603 5 842 205 53 51 26 chrX 33721577 33721616 -132928680 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 5 842 215 324 84 0 chrX 33721618 33721689 -132928607 + ID2 SINE ID 2 78 -5 5 842 552 30 0 0 chrX 33722547 33722613 -132927683 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 842 734 204 0 7 chrX 33722620 33722758 -132927538 - MTD LTR MaLR -264 155 19 5 842 416 278 0 0 chrX 33722858 33722966 -132927330 + PB1D10 SINE Alu 5 112 -5 5 842 250 320 13 0 chrX 33723191 33723269 -132927027 + GA-rich Low_complexity Low_complexity 2 80 0 5 842 518 296 34 14 chrX 33723456 33723603 -132926693 + RSINE1 SINE B4 4 153 -12 5 842 21 36 0 0 chrX 33723623 33723651 -132926645 + AT_rich Low_complexity Low_complexity 1 28 0 5 842 208 236 187 9 chrX 33724047 33724154 -132926142 - L2c LINE L2 0 3426 3289 5 842 263 242 0 16 chrX 33724163 33724226 -132926070 - tRNA-Ala-GCY_ tRNA tRNA -4 71 10 5 842 351 224 15 0 chrX 33724173 33724240 -132926056 - ID2 SINE ID -15 68 1 5 842 474 212 40 10 chrX 33724324 33724424 -132925872 - B1F SINE Alu -46 103 1 5 842 379 244 0 0 chrX 33724580 33724658 -132925638 + ID4 SINE ID 4 81 -2 5 842 3618 44 19 0 chrX 33724901 33725330 -132924966 + L1_Mus1 LINE L1 6130 6566 -1 5 842 387 0 0 0 chrX 33725388 33725431 -132924865 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 842 329 219 75 0 chrX 33725472 33725572 -132924724 - PB1D10 SINE Alu -34 115 7 5 842 21 0 0 0 chrX 33725615 33725636 -132924660 + AT_rich Low_complexity Low_complexity 1 21 0 5 842 186 200 133 0 chrX 33725697 33725757 -132924539 - L3 LINE CR1 -243 4246 4179 5 842 198 313 88 29 chrX 33726149 33726251 -132924045 - L2b LINE L2 0 3375 3268 5 842 289 216 33 63 chrX 33727213 33727317 -132922979 - MIR SINE MIR -37 231 120 5 842 360 111 0 0 chrX 33727342 33727405 -132922891 + (TG)n Simple_repeat Simple_repeat 1 63 0 5 842 582 285 71 18 chrX 33727415 33727640 -132922656 - B4A SINE B4 0 292 56 5 842 2309 69 62 21 chrX 33728011 33728281 -132922015 - Lx3_Mus LINE L1 -800 6209 5923 5 842 213 65 0 0 chrX 33728281 33728312 -132921984 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 842 2309 69 62 21 chrX 33728312 33728381 -132921915 - Lx3_Mus LINE L1 -1087 5922 5856 5 842 5812 67 30 1 chrX 33728381 33729154 -132921142 + Lx3_Mus LINE L1 6207 7001 -8 5 842 300 272 8 116 chrX 33729172 33729301 -132920995 - B3A SINE B2 -3 195 81 5 842 705 22 0 21 chrX 33729355 33729450 -132920846 + B1_Mm SINE Alu 55 147 0 5 842 1473 80 0 0 chrX 33729586 33729774 -132920522 + B2_Mm2 SINE B2 1 188 -7 5 842 334 301 81 49 chrX 33729835 33730020 -132920276 + ORR1E LTR MaLR 1 191 -168 5 842 380 250 7 0 chrX 33730166 33730310 -132919986 + (TG)n Simple_repeat Simple_repeat 2 146 0 5 842 1142 259 72 18 chrX 33730319 33730941 -132919355 - L1M4 LINE L1 -541 5643 4967 5 842 269 160 25 51 chrX 33730953 33731050 -132919246 + (TTA)n Simple_repeat Simple_repeat 1 94 0 5 842 503 300 112 6 chrX 33731466 33731627 -132918669 + B3A SINE B2 1 178 -20 5 842 2557 74 6 0 chrX 33731904 33732229 -132918067 + ORR1A2 LTR MaLR 1 327 0 5 842 1936 130 20 196 chrX 33732766 33733225 -132917071 - ORR1C1 LTR MaLR 0 378 1 5 842 1548 164 27 37 chrX 33733228 33733556 -132916740 - ORR1D1 LTR MaLR -49 325 1 5 842 662 199 7 58 chrX 33734957 33735112 -132915184 + B1F SINE Alu 1 147 -2 5 842 531 0 0 0 chrX 33735298 33735357 -132914939 + (GA)n Simple_repeat Simple_repeat 1 59 0 5 842 383 287 0 0 chrX 33735371 33735472 -132914824 - ID_B1 SINE B4 -33 191 91 5 842 515 383 38 44 chrX 33737553 33738140 -132912156 + MamGyp-int LTR Gypsy 591 1173 -3889 5 842 233 234 47 0 chrX 33739322 33739386 -132910910 + B1F SINE Alu 49 115 -34 5 842 333 271 2 2 chrX 33739424 33739492 -132910804 + ID4 SINE ID 5 74 -78 5 842 192 77 0 0 chrX 33739492 33739518 -132910778 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 842 314 282 23 23 chrX 33739518 33739536 -132910760 + BC1_Mm scRNA scRNA 75 91 -61 5 842 268 250 0 0 chrX 33739533 33739581 -132910715 + ID4 SINE ID 26 73 -10 5 842 262 270 0 16 chrX 33739581 33739597 -132910699 + ID SINE ID 27 89 -135 5 842 279 0 0 0 chrX 33739597 33739628 -132910668 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 842 364 93 19 0 chrX 33739669 33739723 -132910573 + HAL1-3A_ME LINE L1 1976 2030 -828 5 842 387 0 0 0 chrX 33739776 33739819 -132910477 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 842 323 231 209 39 chrX 33741162 33741315 -132908981 - MTEb LTR MaLR 0 379 201 5 842 234 0 0 0 chrX 33741321 33741347 -132908949 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 842 546 89 0 0 chrX 33741347 33741437 -132908859 + (GA)n Simple_repeat Simple_repeat 1 90 0 5 842 882 216 0 29 chrX 33741484 33741689 -132908607 - MTEb LTR MaLR -180 199 1 5 842 479 123 0 12 chrX 33741969 33742051 -132908245 + (TCTCCC)n Simple_repeat Simple_repeat 5 85 0 5 842 223 326 21 21 chrX 33742508 33742602 -132907694 - MIRb SINE MIR -52 216 123 5 842 1267 146 56 9 chrX 33742668 33742883 -132907413 + URR1B DNA MER1_type 1 225 0 5 842 935 168 162 0 chrX 33744231 33744404 -132905892 + B3 SINE B2 2 202 -14 5 842 455 215 123 8 chrX 33744947 33745069 -132905227 - B4 SINE B4 -153 139 4 5 842 786 269 31 31 chrX 33745198 33745421 -132904875 + ID_B1 SINE B4 2 224 0 5 842 499 184 0 0 chrX 33745421 33745508 -132904788 + B3A SINE B2 1 87 -111 5 842 1567 42 0 21 chrX 33745801 33745994 -132904302 - B2_Mm1a SINE B2 -3 190 2 5 842 224 203 12 48 chrX 33746368 33746451 -132903845 + A-rich Low_complexity Low_complexity 3 82 0 5 842 329 314 6 23 chrX 33747134 33747307 -132902989 + (CTAGG)n Simple_repeat Simple_repeat 5 174 0 5 842 1074 255 57 70 chrX 33748502 33748991 -132901305 - L1MB7 LINE L1 -189 5995 5513 5 842 617 254 111 19 chrX 33749120 33749381 -132900915 - RMER20B LTR ERVK -215 412 128 5 842 281 47 0 23 chrX 33749600 33749644 -132900652 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 5 842 545 292 22 14 chrX 33749836 33749975 -132900321 + RSINE1 SINE B4 14 153 -12 5 842 402 21 0 0 chrX 33749977 33750024 -132900272 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 842 226 175 35 0 chrX 33750089 33750146 -132900150 + L1_Rod LINE L1 5735 5793 -54 5 842 216 0 0 0 chrX 33750242 33750266 -132900030 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 842 823 176 20 0 chrX 33750674 33750827 -132899469 - B3 SINE B2 -9 207 52 5 842 2844 156 40 65 chrX 33750943 33751049 -132899247 - RMER20B LTR ERVK -44 583 483 5 842 267 31 0 0 chrX 33751049 33751081 -132899215 + (TGG)n Simple_repeat Simple_repeat 3 34 0 5 842 2844 156 40 65 chrX 33751081 33751572 -132898724 - RMER20B LTR ERVK -145 482 1 5 842 368 98 33 0 chrX 33751917 33751978 -132898318 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 5 842 215 170 0 21 chrX 33752290 33752338 -132897958 + (TTA)n Simple_repeat Simple_repeat 2 48 0 5 842 598 100 124 0 chrX 33753013 33753120 -132897176 + Lx5 LINE L1 5636 5757 -1224 5 842 667 152 112 0 chrX 33753125 33753250 -132897046 - B1_Mur2 SINE Alu -2 147 9 5 842 841 213 86 0 chrX 33753260 33753434 -132896862 - B3A SINE B2 -6 192 4 5 842 441 0 0 0 chrX 33753450 33753499 -132896797 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 5 842 327 49 0 0 chrX 33754277 33754318 -132895978 + (TC)n Simple_repeat Simple_repeat 2 42 0 5 842 374 245 149 0 chrX 33754488 33754582 -132895714 - ID_B1 SINE B4 -24 200 93 5 842 22 35 0 0 chrX 33754679 33754708 -132895588 + AT_rich Low_complexity Low_complexity 1 29 0 5 842 386 152 38 0 chrX 33754794 33754873 -132895423 - L1Md_F2 LINE L1 0 6582 6501 5 842 2233 51 0 0 chrX 33754873 33755146 -132895150 - L1_Mus1 LINE L1 -219 6348 6076 5 842 1050 215 128 36 chrX 33755681 33755985 -132894311 - IAPEY3_LTR LTR ERVK 0 332 1 5 842 713 304 29 0 chrX 33756060 33756264 -132894032 - B4A SINE B4 -82 210 1 5 842 934 150 14 0 chrX 33756305 33756452 -132893844 - B1_Mur4 SINE Alu 0 150 2 5 842 825 183 120 0 chrX 33756476 33756667 -132893629 - RMER1B Other Other -5 1061 848 5 842 430 321 25 93 chrX 33756688 33756925 -132893371 + MER58A DNA MER1_type 4 224 0 5 842 276 330 23 85 chrX 33757068 33757197 -132893099 + MamRep605 Unknown Unknown 717 837 -39 5 842 211 154 26 0 chrX 33757208 33757247 -132893049 + (TATG)n Simple_repeat Simple_repeat 4 43 0 5 842 237 163 0 0 chrX 33757267 33757316 -132892980 + (TGG)n Simple_repeat Simple_repeat 1 49 0 5 842 557 116 39 34 chrX 33757323 33757502 -132892794 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 842 356 294 26 58 chrX 33757503 33757658 -132892638 - RSINE1 SINE B4 0 165 16 6 842 202 219 45 45 chrX 33757853 33757920 -132892376 + MIR SINE MIR 118 184 -78 6 842 207 268 18 18 chrX 33758118 33758175 -132892121 + CT-rich Low_complexity Low_complexity 1 57 0 6 842 242 354 68 70 chrX 33758218 33758633 -132891663 - L2b LINE L2 -3 3384 2976 6 842 592 264 7 0 chrX 33758704 33758848 -132891448 - B1F2 SINE Alu -4 145 1 6 842 342 275 0 11 chrX 33758873 33758965 -132891331 + PB1D10 SINE Alu 15 105 -12 6 842 1298 288 77 9 chrX 33758968 33759424 -132890872 + MLT1D LTR MaLR 2 488 -17 6 842 507 174 211 55 chrX 33759742 33759870 -132890426 + B1_Mus1 SINE Alu 1 148 0 6 842 793 114 15 0 chrX 33759870 33760002 -132890294 + (GAAA)n Simple_repeat Simple_repeat 3 136 0 6 842 265 246 53 40 chrX 33760015 33760091 -132890205 - B3A SINE B2 -22 176 100 6 842 411 197 0 50 chrX 33760183 33760263 -132890033 - B3A SINE B2 -122 76 1 6 842 426 289 65 109 chrX 33760334 33760410 -132889886 + ORR1E LTR MaLR 9 81 -278 6 842 2352 142 64 30 chrX 33760410 33760817 -132889479 - MTC LTR MaLR 0 421 1 6 842 426 283 40 104 chrX 33760817 33761105 -132889191 + ORR1E LTR MaLR 82 368 -11 6 842 406 264 52 44 chrX 33761229 33761364 -132888932 + MLT1A LTR MaLR 1 136 -238 6 842 1025 177 11 0 chrX 33761494 33761675 -132888621 - B3 SINE B2 -30 186 4 6 842 261 0 0 0 chrX 33761705 33761734 -132888562 + (T)n Simple_repeat Simple_repeat 1 29 0 6 842 1246 41 0 0 chrX 33761738 33761885 -132888411 - B1_Mus2 SINE Alu 0 147 1 6 842 282 267 0 0 chrX 33761957 33762017 -132888279 - MER5A DNA MER1_type -1 188 129 6 842 437 297 131 0 chrX 33762038 33762267 -132888029 + L1MC4a LINE L1 6355 6613 -1269 6 842 35 24 0 0 chrX 33762321 33762363 -132887933 + AT_rich Low_complexity Low_complexity 1 42 0 6 842 1127 82 0 7 chrX 33762363 33762510 -132887786 - B1_Mm SINE Alu 0 147 2 6 842 7879 64 0 2 chrX 33762526 33763801 -132886495 - L1_Mus2 LINE L1 -1 6565 5295 6 842 360 229 41 20 chrX 33763830 33763928 -132886368 + L1MC4a LINE L1 7240 7339 -703 6 842 483 248 21 50 chrX 33764124 33764264 -132886032 - ID_B1 SINE B4 -3 221 86 6 842 243 234 30 60 chrX 33764329 33764429 -132885867 - Lx9 LINE L1 -31 7613 7517 6 842 486 0 0 0 chrX 33764463 33764517 -132885779 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 842 1140 169 30 15 chrX 33764517 33764715 -132885581 + Lx9 LINE L1 6586 6786 -858 6 842 320 284 42 25 chrX 33764715 33764834 -132885462 + L1MC4a LINE L1 7761 7881 -1 6 842 182 295 122 26 chrX 33764917 33765032 -132885264 - L2 LINE L2 -661 2758 2633 6 842 1193 126 11 16 chrX 33766482 33766667 -132883629 - B2_Mm1t SINE B2 -9 184 1 6 842 561 212 182 14 chrX 33766692 33766840 -132883456 - B3 SINE B2 0 216 44 6 842 199 302 36 100 chrX 33766950 33767090 -132883206 + MIRb SINE MIR 110 240 -28 6 842 324 215 9 18 chrX 33767258 33767367 -132882929 + (TA)n Simple_repeat Simple_repeat 2 109 0 6 842 895 300 8 26 chrX 33767446 33767713 -132882583 + B4A SINE B4 17 278 -14 6 842 242 351 60 26 chrX 33767780 33767897 -132882399 + MIR SINE MIR 29 149 -113 6 842 283 277 0 15 chrX 33768589 33768655 -132881641 + ID4_ SINE ID 5 69 -14 6 842 464 31 31 0 chrX 33769652 33769717 -132880579 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 6 842 276 288 12 12 chrX 33770252 33770333 -132879963 - MLT1J1 LTR MaLR -283 161 81 6 842 378 42 0 0 chrX 33770605 33770653 -132879643 + (TCCC)n Simple_repeat Simple_repeat 3 50 0 6 842 369 0 0 0 chrX 33771123 33771164 -132879132 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 842 315 0 0 0 chrX 33771235 33771270 -132879026 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 842 324 83 0 0 chrX 33771424 33771472 -132878824 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 842 700 268 110 75 chrX 33771974 33772256 -132878040 - B4 SINE B4 0 292 1 6 842 240 374 36 2 chrX 33772804 33772916 -132877380 - B1F1 SINE Alu -7 110 1 6 842 517 316 59 0 chrX 33773010 33773197 -132877099 + B3A SINE B2 1 198 0 6 842 488 126 31 93 chrX 33773227 33773420 -132876876 + RMER17C LTR ERVK 95 275 -135 6 842 423 0 0 0 chrX 33774096 33774143 -132876153 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 842 297 68 0 0 chrX 33774146 33774190 -132876106 + (GA)n Simple_repeat Simple_repeat 1 44 0 6 842 445 216 14 0 chrX 33774853 33774954 -132875342 + PB1D10 SINE Alu 10 114 -6 6 842 288 0 0 0 chrX 33774958 33774990 -132875306 + (CAAA)n Simple_repeat Simple_repeat 3 34 0 6 842 217 264 0 54 chrX 33775074 33775130 -132875166 + ID SINE ID 12 64 -160 6 842 224 285 0 14 chrX 33775084 33775153 -132875143 + ID4 SINE ID 18 83 0 6 842 219 69 0 0 chrX 33775407 33775436 -132874860 + (T)n Simple_repeat Simple_repeat 1 29 0 6 842 299 291 12 0 chrX 33776139 33776225 -132874071 + MIRc SINE MIR 24 110 -158 6 842 613 98 10 19 chrX 33776930 33777034 -132873262 + (TCCC)n Simple_repeat Simple_repeat 3 105 0 6 842 21 0 0 0 chrX 33777824 33777845 -132872451 + AT_rich Low_complexity Low_complexity 1 21 0 6 842 801 206 14 0 chrX 33778242 33778388 -132871908 + B1_Mur1 SINE Alu 2 149 0 6 842 584 277 23 0 chrX 33778868 33778998 -132871298 - RSINE1 SINE B4 -31 134 2 6 842 252 0 0 0 chrX 33779689 33779717 -132870579 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 6 842 601 298 144 61 chrX 33779839 33779905 -132870391 - B4 SINE B4 -4 288 224 6 842 408 88 0 0 chrX 33779905 33779962 -132870334 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 842 601 298 144 61 chrX 33779962 33780096 -132870200 - B4 SINE B4 -69 223 72 6 842 366 23 0 0 chrX 33780096 33780139 -132870157 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 842 601 298 144 61 chrX 33780139 33780201 -132870095 - B4 SINE B4 -221 71 4 6 842 369 280 11 0 chrX 33780233 33780326 -132869970 - ID4_ SINE ID -59 93 1 6 842 360 0 0 0 chrX 33780438 33780478 -132869818 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 842 255 61 0 0 chrX 33780603 33780636 -132869660 + (TC)n Simple_repeat Simple_repeat 1 33 0 6 842 583 285 0 0 chrX 33780810 33780975 -132869321 - Lx7 LINE L1 -663 7033 6869 6 842 308 212 148 20 chrX 33781067 33781168 -132869128 + L1ME4a LINE L1 6011 6124 0 6 842 288 77 0 0 chrX 33781251 33781290 -132869006 + (A)n Simple_repeat Simple_repeat 1 39 0 6 842 423 0 0 0 chrX 33782396 33782443 -132867853 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 842 924 297 3 24 chrX 33782449 33782739 -132867557 - B4A SINE B4 -7 285 2 6 842 3311 308 27 25 chrX 33784355 33785624 -132864672 - Lx8 LINE L1 -153 7320 6050 6 842 806 189 65 50 chrX 33785627 33785827 -132864469 - ORR1D1 LTR MaLR -8 376 174 6 842 378 159 0 0 chrX 33785827 33785896 -132864400 + GA-rich Low_complexity Low_complexity 1 69 0 6 842 1179 35 0 7 chrX 33785950 33786092 -132864204 - B1_Mus2 SINE Alu -5 142 2 6 842 921 133 13 0 chrX 33786096 33786246 -132864050 - ORR1D1 LTR MaLR -222 152 1 6 842 767 228 94 0 chrX 33786322 33786524 -132863772 - Lx7 LINE L1 -746 6950 6730 6 842 1069 289 17 22 chrX 33786525 33786886 -132863410 + Lx7 LINE L1 7001 7359 -337 6 842 291 231 87 11 chrX 33787126 33787218 -132863078 + MER3 DNA MER1_type 90 188 -21 6 842 496 333 61 20 chrX 33787272 33787517 -132862779 + MIRb SINE MIR 13 267 -1 6 842 479 307 43 0 chrX 33787814 33787954 -132862342 - ID_B1 SINE B4 -7 217 72 6 842 582 324 81 0 chrX 33787977 33788199 -132862097 + MIR SINE MIR 15 254 -8 6 842 217 350 39 20 chrX 33788536 33788638 -132861658 - L2 LINE L2 -464 2955 2852 6 842 570 298 0 0 chrX 33788655 33788786 -132861510 - ID_B1 SINE B4 -1 223 93 6 842 384 326 120 37 chrX 33789123 33789422 -132860874 + L2a LINE L2 3103 3426 0 6 842 619 232 73 26 chrX 33789739 33789973 -132860323 - L1MB8 LINE L1 -6 6172 5928 6 842 485 269 76 8 chrX 33789981 33790112 -132860184 - B1F SINE Alu -5 144 5 6 842 6761 42 11 22 chrX 33790112 33791019 -132859277 + L1_Mus2 LINE L1 5669 6565 -1 6 842 249 156 94 0 chrX 33791102 33791166 -132859130 - L1MB8 LINE L1 -312 5866 5797 6 842 311 80 40 0 chrX 33791167 33791217 -132859079 + (TCTCCC)n Simple_repeat Simple_repeat 4 55 0 6 842 430 288 90 3 chrX 33791326 33791514 -132858782 - L1MB8 LINE L1 -489 5682 5482 6 842 1248 208 71 54 chrX 33791545 33791580 -132858716 - B4 SINE B4 0 292 270 6 842 312 27 0 0 chrX 33791580 33791617 -132858679 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 842 1248 208 71 54 chrX 33791617 33791861 -132858435 - B4 SINE B4 -23 269 8 6 842 234 282 103 0 chrX 33792074 33792152 -132858144 - L2 LINE L2 -661 2758 2673 6 842 238 250 35 23 chrX 33792428 33792514 -132857782 - Tigger15a DNA TcMar -126 589 503 6 842 252 244 169 12 chrX 33792876 33792922 -132857374 + RMER30 DNA MER1_type 38 83 -119 6 842 186 43 0 0 chrX 33792922 33792945 -132857351 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 6 842 252 244 169 12 chrX 33792945 33792981 -132857315 + RMER30 DNA MER1_type 84 133 -69 6 842 303 262 175 49 chrX 33792983 33793109 -132857187 - Lx7 LINE L1 -4 7692 7555 6 842 390 21 0 0 chrX 33793109 33793156 -132857140 + (TAA)n Simple_repeat Simple_repeat 2 48 0 6 842 303 262 175 49 chrX 33793156 33793334 -132856962 - Lx7 LINE L1 -142 7554 7352 6 842 1021 68 0 120 chrX 33793334 33793501 -132856795 + B1_Mm SINE Alu 1 147 0 6 842 303 262 175 49 chrX 33793501 33793520 -132856776 - Lx7 LINE L1 -345 7351 7328 6 842 297 0 0 0 chrX 33793551 33793584 -132856712 + (A)n Simple_repeat Simple_repeat 1 33 0 6 842 2443 188 20 8 chrX 33793614 33794117 -132856179 - Lx7 LINE L1 -361 7335 6827 6 842 374 257 19 19 chrX 33794317 33794424 -132855872 - MLT1D LTR MaLR 0 505 399 6 842 428 315 169 66 chrX 33794439 33794711 -132855585 - MLT1D LTR MaLR -203 302 3 6 842 1713 327 115 20 chrX 33795224 33796254 -132854042 + L1MDb LINE L1 52 1178 -5231 6 842 3523 217 68 39 chrX 33796440 33797505 -132852791 - L1_Rod LINE L1 -964 4883 3787 6 842 788 216 13 7 chrX 33797588 33797737 -132852559 + 7SK RNA RNA 2 151 -180 6 842 300 200 0 0 chrX 33797737 33797807 -132852489 + Lx5 LINE L1 6981 7050 0 6 842 282 56 0 0 chrX 33797821 33797857 -132852439 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 6 842 327 192 0 0 chrX 33797886 33797959 -132852337 + GA-rich Low_complexity Low_complexity 2 74 0 6 842 388 192 12 25 chrX 33797959 33798039 -132852257 + 7SK RNA RNA 160 238 -93 6 842 392 239 134 40 chrX 33798043 33798296 -132852000 + L1MD2 LINE L1 4886 5162 -984 6 842 527 250 146 3 chrX 33798600 33798843 -132851453 + L1MD2 LINE L1 5194 5473 -886 6 842 254 210 138 138 chrX 33798847 33798963 -132851333 + PB1D10 SINE Alu 2 117 0 7 842 331 237 144 0 chrX 33799056 33799174 -132851122 + L1MD2 LINE L1 5750 5884 -475 6 842 1824 157 37 6 chrX 33799177 33799498 -132850798 + Lx4A LINE L1 6669 6999 -59 7 842 300 324 118 17 chrX 33799504 33799859 -132850437 + L1MD2 LINE L1 5893 6283 -76 6 842 230 226 60 11 chrX 33800767 33800857 -132849439 - L1MD2 LINE L1 -416 5943 5850 7 842 432 0 0 0 chrX 33801075 33801123 -132849173 + (TAA)n Simple_repeat Simple_repeat 2 49 0 7 842 1152 68 0 26 chrX 33801130 33801281 -132849015 + B1_Mus2 SINE Alu 1 147 0 7 842 1199 279 23 0 chrX 33801929 33802194 -132848102 + MTE2b LTR MaLR 3 273 -106 7 842 522 252 13 129 chrX 33802492 33802647 -132847649 + RSINE1 SINE B4 29 165 0 7 842 1201 99 0 0 chrX 33803211 33803372 -132846924 + B2_Mm2 SINE B2 1 161 -34 7 842 192 77 0 0 chrX 33803372 33803398 -132846898 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 7 842 647 312 35 42 chrX 33804341 33804629 -132845667 + B4A SINE B4 1 286 -6 7 842 690 203 72 0 chrX 33804685 33804823 -132845473 - B1_Mus1 SINE Alu 0 148 1 7 842 4806 123 75 8 chrX 33804853 33805621 -132844675 - Lx4A LINE L1 -5 7053 6234 7 842 1416 147 4 9 chrX 33805982 33806209 -132844087 - URR1A DNA MER1_type 0 226 1 7 842 6497 53 22 5 chrX 33806882 33807715 -132842581 + L1Md_F2 LINE L1 5733 6579 -3 7 842 2412 290 88 66 chrX 33807801 33807916 -132842380 - L1M3 LINE L1 -1425 4715 4591 7 842 186 43 0 0 chrX 33807916 33807939 -132842357 + (TTTTG)n Simple_repeat Simple_repeat 4 26 0 7 842 2412 290 88 66 chrX 33807939 33807983 -132842313 - L1M3 LINE L1 -1550 4590 4549 7 842 1655 34 5 0 chrX 33807983 33808187 -132842109 - L1Md_F2 LINE L1 -12 6570 6366 7 842 2412 290 88 66 chrX 33808187 33808562 -132841734 - L1M3 LINE L1 -1592 4548 4165 7 842 423 0 0 0 chrX 33808562 33808609 -132841687 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 842 2412 290 88 66 chrX 33808609 33809807 -132840489 - L1M3 LINE L1 -1976 4164 2947 7 842 662 306 33 11 chrX 33809807 33810078 -132840218 - B4A SINE B4 -15 277 1 7 842 2412 290 88 66 chrX 33810078 33810645 -132839651 - L1M3 LINE L1 -3194 2946 2363 7 842 360 0 0 0 chrX 33810654 33810694 -132839602 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 842 612 289 108 12 chrX 33810744 33810993 -132839303 - B4A SINE B4 -18 274 2 7 842 764 21 11 0 chrX 33811237 33811331 -132838965 + (GA)n Simple_repeat Simple_repeat 1 95 0 7 842 550 291 138 69 chrX 33811485 33811862 -132838434 - LTR82B Low_complexity ERVL -427 403 1 7 842 269 342 18 9 chrX 33812086 33812198 -132838098 + L2c LINE L2 3044 3156 -231 7 842 222 316 76 42 chrX 33812697 33812816 -132837480 + MIR SINE MIR 12 134 -128 7 842 1220 269 93 23 chrX 33813719 33814160 -132836136 - Lx8 LINE L1 -2 7471 7000 7 842 252 143 0 0 chrX 33814446 33814488 -132835808 + (GTATG)n Simple_repeat Simple_repeat 4 45 0 7 842 311 256 13 0 chrX 33814980 33815058 -132835238 - ID4_ SINE ID -1 82 4 7 842 183 240 39 20 chrX 33815459 33815510 -132834786 - MER5A DNA MER1_type -74 115 64 7 842 1211 65 0 12 chrX 33815626 33815798 -132834498 - L1Md_A LINE L1 0 6582 6413 7 843 209 57 29 0 chrX 33816685 33816720 -132833576 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 7 843 648 0 0 0 chrX 33816721 33816793 -132833503 + (GTTTG)n Simple_repeat Simple_repeat 2 73 0 7 843 484 248 15 81 chrX 33816796 33816932 -132833364 - ID_B1 SINE B4 -14 210 84 7 843 252 122 0 0 chrX 33817002 33817043 -132833253 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 7 843 500 328 24 72 chrX 33817106 33817313 -132832983 - B4 SINE B4 -60 232 36 7 843 245 29 29 0 chrX 33817903 33817937 -132832359 + (TG)n Simple_repeat Simple_repeat 1 35 0 7 843 440 222 94 8 chrX 33817981 33818108 -132832188 - B1F SINE Alu -2 147 10 7 843 229 226 32 16 chrX 33818129 33818192 -132832104 + CT-rich Low_complexity Low_complexity 3 66 0 7 843 557 275 8 0 chrX 33818290 33818410 -132831886 - ID_B1 SINE B4 -4 220 100 7 843 743 279 105 105 chrX 33818723 33819191 -132831105 + LTR50 LTR ERVL 3 470 -325 7 843 608 323 39 12 chrX 33819327 33819680 -132830616 - L1MD2 LINE L1 -127 6052 5694 7 843 319 326 0 30 chrX 33819689 33819790 -132830506 - PB1D10 SINE Alu -1 116 19 7 843 816 267 60 24 chrX 33819792 33820167 -132830129 - L1MD2 LINE L1 -545 5697 5304 7 843 263 308 94 44 chrX 33820201 33820520 -132829776 - L1MD2 LINE L1 -908 5238 4904 7 843 668 210 45 11 chrX 33820990 33821164 -132829132 + B3 SINE B2 1 189 -6 7 843 1296 243 7 13 chrX 33821293 33821597 -132828699 - Lx5 LINE L1 -234 6816 6515 7 843 1614 229 35 3 chrX 33821599 33821940 -132828356 + MTD LTR MaLR 53 404 -15 7 843 604 263 44 0 chrX 33822416 33822553 -132827743 - B1_Mur1 SINE Alu 0 149 7 7 843 597 310 48 70 chrX 33822928 33823191 -132827105 - L1MA4 LINE L1 -283 6017 5741 7 843 3764 69 49 2 chrX 33823191 33823701 -132826595 + L1_Mus1 LINE L1 6028 6561 -6 7 843 597 308 45 70 chrX 33823701 33824001 -132826295 - L1MA4 LINE L1 -560 5740 5464 7 843 220 342 71 88 chrX 33824005 33824175 -132826121 + B4A SINE B4 55 221 -71 7 843 413 288 42 17 chrX 33824058 33824178 -132826118 + B1F SINE Alu 24 146 -3 7 843 213 211 0 0 chrX 33824222 33824274 -132826022 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 843 234 0 0 0 chrX 33824721 33824747 -132825549 + (TTG)n Simple_repeat Simple_repeat 2 27 0 7 843 592 256 74 8 chrX 33824747 33824869 -132825427 - B1_Mus2 SINE Alu -8 139 10 7 843 1246 107 21 0 chrX 33825028 33825215 -132825081 - B2_Mm2 SINE B2 -4 191 1 7 843 4163 70 29 2 chrX 33825414 33825974 -132824322 + L1_Mus3 LINE L1 6057 6631 -7 7 843 24 0 0 0 chrX 33825974 33825998 -132824298 + AT_rich Low_complexity Low_complexity 1 24 0 7 843 426 343 83 47 chrX 33826009 33826393 -132823903 - MLT1D LTR MaLR -59 408 1 7 843 248 296 10 0 chrX 33826398 33826496 -132823800 - L1MEc LINE L1 -3851 2468 2370 7 843 21 0 0 0 chrX 33826507 33826528 -132823768 + AT_rich Low_complexity Low_complexity 1 21 0 7 843 459 297 98 88 chrX 33826535 33826934 -132823362 - L1MEc LINE L1 -5936 464 62 7 843 310 297 33 33 chrX 33826964 33827086 -132823210 - Charlie5 DNA MER1_type -2502 122 1 7 843 22 0 0 0 chrX 33827210 33827232 -132823064 + AT_rich Low_complexity Low_complexity 1 22 0 7 843 823 132 0 62 chrX 33828061 33828206 -132822090 + B1_Mus1 SINE Alu 1 136 -12 7 843 546 57 0 0 chrX 33828209 33828279 -132822017 + (GAAA)n Simple_repeat Simple_repeat 2 71 0 7 843 934 155 0 0 chrX 33828288 33828436 -132821860 + B1_Mus1 SINE Alu 1 148 0 7 843 210 71 0 0 chrX 33828437 33828465 -132821831 + (A)n Simple_repeat Simple_repeat 1 28 0 7 843 549 274 39 6 chrX 33828992 33829172 -132821124 + Lx6 LINE L1 7232 7417 -43 7 843 347 305 89 42 chrX 33829239 33829460 -132820836 + MIR SINE MIR 20 266 -2 7 843 208 357 0 17 chrX 33829518 33829590 -132820706 - L2c LINE L2 -70 3317 3220 7 843 276 281 163 30 chrX 33830155 33830357 -132819939 - Lx8 LINE L1 0 7473 7245 7 843 401 200 284 9 chrX 33831545 33831661 -132818635 + B1F SINE Alu 1 148 -1 7 843 892 296 52 49 chrX 33832345 33832584 -132817712 + Lx8 LINE L1 6967 7212 -261 7 843 797 177 186 11 chrX 33832584 33832772 -132817524 + URR1B DNA MER1_type 1 221 -4 7 843 892 296 52 49 chrX 33832772 33832880 -132817416 + Lx8 LINE L1 7213 7315 -158 7 843 798 187 0 14 chrX 33832895 33833036 -132817260 + B1_Mur1 SINE Alu 3 141 -8 7 843 1483 267 150 15 chrX 33833632 33833671 -132816625 - L1_Rod LINE L1 -82 5765 5721 7 843 201 121 0 0 chrX 33833671 33833704 -132816592 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 843 1483 267 150 15 chrX 33833704 33834484 -132815812 - L1_Rod LINE L1 -127 5720 4836 7 843 3331 141 58 135 chrX 33834545 33835325 -132814971 + RMER6D LTR ERVK 1 720 0 7 843 278 267 74 121 chrX 33835456 33835591 -132814705 - L1M2 LINE L1 -1302 4841 4692 7 843 5112 71 16 10 chrX 33835591 33836272 -132814024 + Lx3_Mus LINE L1 6321 7005 -4 7 843 240 267 74 121 chrX 33836272 33836392 -132813904 - L1M2 LINE L1 -1448 4695 4599 7 843 369 0 0 0 chrX 33836396 33836437 -132813859 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 843 627 233 0 0 chrX 33836461 33836590 -132813706 - B3 SINE B2 -77 139 11 7 843 1326 259 122 19 chrX 33836628 33837159 -132813137 - L1M2 LINE L1 -1570 4573 3988 7 843 30 27 0 0 chrX 33837176 33837213 -132813083 + AT_rich Low_complexity Low_complexity 1 37 0 7 843 226 276 9 28 chrX 33837279 33837387 -132812909 + A-rich Low_complexity Low_complexity 3 108 0 7 843 441 36 0 0 chrX 33837402 33837457 -132812839 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 843 274 225 113 0 chrX 33837460 33837531 -132812765 - Lx7 LINE L1 -375 7321 7243 7 843 997 275 62 50 chrX 33837532 33837914 -132812382 - L1M2 LINE L1 -2183 3957 3574 7 843 1360 95 26 5 chrX 33837914 33838104 -132812192 + B2_Mm2 SINE B2 1 194 -1 7 843 997 275 62 50 chrX 33838104 33838345 -132811951 - L1M2 LINE L1 -2567 3573 3326 7 843 448 171 227 17 chrX 33838329 33838448 -132811848 - RMER1B Other Other -14 1052 872 7 843 1592 165 95 46 chrX 33838872 33839238 -132811058 - ORR1C2 LTR MaLR 0 421 1 7 843 477 0 0 0 chrX 33839445 33839498 -132810798 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 843 347 233 21 56 chrX 33839731 33839855 -132810441 - L1_Rod LINE L1 -1993 3893 3771 7 843 496 276 42 5 chrX 33839964 33840157 -132810139 - Lx9 LINE L1 -119 7525 7326 7 843 21 36 0 0 chrX 33840416 33840444 -132809852 + AT_rich Low_complexity Low_complexity 1 28 0 7 843 294 213 112 52 chrX 33840469 33840603 -132809693 - Lx8 LINE L1 -1 7472 7331 7 843 272 158 18 0 chrX 33841140 33841197 -132809099 + (CATA)n Simple_repeat Simple_repeat 3 60 0 7 843 483 100 0 0 chrX 33841256 33841326 -132808970 + (GGA)n Simple_repeat Simple_repeat 3 72 0 7 843 339 85 0 0 chrX 33842607 33842654 -132807642 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 7 843 4384 151 43 114 chrX 33842792 33843891 -132806405 - ORR1A4-int LTR MaLR -942 1021 1 7 843 1786 121 107 10 chrX 33843891 33844191 -132806105 - ORR1A4 LTR MaLR 0 329 1 7 843 484 203 25 8 chrX 33844191 33844310 -132805986 - L1_Mur3 LINE L1 -2075 3805 3685 7 843 724 340 77 8 chrX 33844311 33844664 -132805632 - Lx8 LINE L1 -600 6873 6497 7 843 598 298 132 30 chrX 33844693 33844792 -132805504 - L1_Mur3 LINE L1 -3442 2438 2341 7 843 3729 52 0 0 chrX 33844792 33845237 -132805059 - L1_Mus1 LINE L1 -1 6566 6122 7 843 598 298 132 30 chrX 33845237 33845569 -132804727 - L1_Mur3 LINE L1 -3540 2340 1964 7 843 573 129 0 0 chrX 33845770 33845863 -132804433 + B1_Mus2 SINE Alu 55 147 0 7 843 192 77 0 0 chrX 33845864 33845890 -132804406 + (A)n Simple_repeat Simple_repeat 1 26 0 7 843 1007 294 94 12 chrX 33845891 33846205 -132804091 - L1_Rod LINE L1 -4024 1823 1494 8 843 900 28 0 0 chrX 33846205 33846312 -132803984 + (TTTTC)n Simple_repeat Simple_repeat 1 107 0 8 843 1007 274 117 20 chrX 33846312 33846731 -132803565 - L1_Rod LINE L1 -4354 1493 1025 8 843 216 0 0 0 chrX 33847410 33847434 -132802862 + (TTG)n Simple_repeat Simple_repeat 1 24 0 8 843 180 0 0 0 chrX 33847434 33847454 -132802842 + (TGG)n Simple_repeat Simple_repeat 3 22 0 8 843 308 24 24 0 chrX 33847468 33847509 -132802787 + (TG)n Simple_repeat Simple_repeat 1 42 0 8 843 685 287 146 12 chrX 33847645 33847966 -132802330 + L1M2 LINE L1 4627 4990 -1153 8 843 349 286 20 20 chrX 33847966 33848066 -132802230 + B3A SINE B2 2 101 -97 8 843 1926 280 148 31 chrX 33848066 33849612 -132800684 + Lx8 LINE L1 5501 7265 -208 8 843 703 252 147 4 chrX 33850031 33850262 -132800034 + L1MB7 LINE L1 4721 4984 -1162 8 843 387 237 54 0 chrX 33850262 33850354 -132799942 + MTD LTR MaLR 1 97 -324 8 843 1108 76 6 0 chrX 33850354 33850511 -132799785 + B2_Mm1t SINE B2 1 158 -35 8 843 306 0 0 0 chrX 33850511 33850545 -132799751 + (TAA)n Simple_repeat Simple_repeat 3 36 0 8 843 261 0 0 0 chrX 33850545 33850574 -132799722 + (GAA)n Simple_repeat Simple_repeat 1 29 0 8 843 836 184 98 44 chrX 33850574 33850779 -132799517 + MTD LTR MaLR 84 299 -120 8 843 271 191 42 56 chrX 33850917 33850989 -132799307 + L1MB7 LINE L1 5333 5403 -775 8 843 320 275 0 0 chrX 33851151 33851220 -132799076 + ID4_ SINE ID 6 74 -9 8 843 782 252 96 4 chrX 33851224 33851463 -132798833 + L1MB7 LINE L1 5716 5976 -208 8 843 5593 214 144 35 chrX 33851475 33852099 -132798197 - L1_Mur3 LINE L1 -230 5650 5045 8 843 3936 103 7 5 chrX 33852099 33852663 -132797633 + Lx3C LINE L1 6403 6967 -9 8 843 5593 214 144 35 chrX 33852663 33852745 -132797551 - L1_Mur3 LINE L1 -836 5044 4891 8 843 3210 58 24 5 chrX 33852745 33853158 -132797138 + L1Md_F2 LINE L1 6160 6580 -2 8 843 5593 214 144 35 chrX 33853158 33854174 -132796122 - L1_Mur3 LINE L1 -990 4890 3739 8 843 1408 227 95 11 chrX 33854163 33854541 -132795755 - Lx9 LINE L1 -3 7641 7232 8 843 903 289 12 16 chrX 33854530 33854853 -132795443 - L1_Mur3 LINE L1 -3922 1958 1637 8 843 6209 37 5 8 chrX 33855729 33856483 -132793813 + L1Md_F3 LINE L1 5832 6583 -1 8 843 283 260 40 0 chrX 33856514 33856614 -132793682 - L1MEc LINE L1 -6277 123 20 8 843 750 234 0 14 chrX 33856827 33856974 -132793322 - RSINE1 SINE B4 -18 147 3 8 843 324 264 75 0 chrX 33859674 33859780 -132790516 - L1MA4A LINE L1 -375 5928 5815 8 843 229 179 0 45 chrX 33860418 33860490 -132789806 + B1F1 SINE Alu 55 120 0 8 843 455 283 29 7 chrX 33861283 33861422 -132788874 - B1F1 SINE Alu -7 142 1 8 843 864 280 154 24 chrX 33861482 33861983 -132788313 + L1M3 LINE L1 5170 5748 -423 8 843 21 0 0 0 chrX 33862102 33862123 -132788173 + AT_rich Low_complexity Low_complexity 1 21 0 8 843 2571 167 35 7 chrX 33862156 33862619 -132787677 - Lx3C LINE L1 -2 6974 6499 8 843 2235 76 38 6 chrX 33862619 33862935 -132787361 - Lx3C LINE L1 -571 6405 6080 8 843 1096 189 8 44 chrX 33862936 33863185 -132787111 - Lx2B LINE L1 -5 6995 6756 8 843 384 77 0 0 chrX 33863633 33863685 -132786611 + (T)n Simple_repeat Simple_repeat 1 52 0 8 843 275 304 38 0 chrX 33864002 33864081 -132786215 + ID4_ SINE ID 2 83 0 8 843 230 322 61 18 chrX 33864547 33864703 -132785593 + MIRm SINE MIR 23 185 -91 8 843 234 0 0 0 chrX 33865093 33865119 -132785177 + (T)n Simple_repeat Simple_repeat 1 26 0 8 843 21 0 0 0 chrX 33867540 33867561 -132782735 + GC_rich Low_complexity Low_complexity 1 21 0 8 843 27 29 0 0 chrX 33869204 33869238 -132781058 + GC_rich Low_complexity Low_complexity 1 34 0 8 843 198 0 0 0 chrX 33869522 33869544 -132780752 + (CG)n Simple_repeat Simple_repeat 1 22 0 8 843 306 73 0 0 chrX 33870127 33870168 -132780128 + (CGGG)n Simple_repeat Simple_repeat 4 44 0 8 843 323 224 94 0 chrX 33871495 33871580 -132778716 + MIR3 SINE MIR 62 154 -54 8 843 194 83 63 48 chrX 33871761 33871824 -132778472 + T-rich Low_complexity Low_complexity 3 66 0 8 843 193 29 59 0 chrX 33871838 33871872 -132778424 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 8 843 961 72 65 0 chrX 33871889 33872027 -132778269 - B1_Mus2 SINE Alu 0 147 1 8 843 360 330 53 48 chrX 33872872 33873079 -132777217 + MIR SINE MIR 34 241 -21 8 843 267 31 0 0 chrX 33873083 33873115 -132777181 + (CCA)n Simple_repeat Simple_repeat 3 34 0 8 843 271 349 20 14 chrX 33873487 33873635 -132776661 + MIRc SINE MIR 87 235 -33 8 843 454 319 88 31 chrX 33873687 33874007 -132776289 - MER46C DNA MER2_type 0 338 1 8 843 220 281 105 19 chrX 33874970 33875075 -132775221 + MIRm SINE MIR 70 183 -93 8 843 219 69 0 0 chrX 33876674 33876703 -132773593 + (T)n Simple_repeat Simple_repeat 1 29 0 8 843 255 103 0 0 chrX 33878019 33878058 -132772238 + (CATA)n Simple_repeat Simple_repeat 2 40 0 8 843 1544 182 62 19 chrX 33878476 33878846 -132771450 - MTD LTR MaLR -2 417 32 8 843 586 282 28 0 chrX 33879147 33879324 -132770972 - B3A SINE B2 -16 182 1 8 843 185 374 26 17 chrX 33880289 33880406 -132769890 + MIR SINE MIR 21 138 -70 8 843 261 330 133 9 chrX 33883413 33883624 -132766672 + MIR SINE MIR 12 248 -14 8 843 303 250 0 0 chrX 33883997 33884081 -132766215 + (TA)n Simple_repeat Simple_repeat 2 85 0 8 843 1011 260 20 92 chrX 33885115 33885462 -132764834 - MTEa LTR MaLR 0 379 58 8 843 2576 41 6 0 chrX 33885468 33885808 -132764488 + MTA_Mm LTR MaLR 55 396 0 8 843 628 240 8 0 chrX 33886051 33886180 -132764116 + ID_B1 SINE B4 82 211 -13 8 843 180 0 0 0 chrX 33886180 33886200 -132764096 + (T)n Simple_repeat Simple_repeat 1 20 0 8 843 341 288 57 33 chrX 33887061 33887218 -132763078 + MIR3 SINE MIR 1 167 -101 8 843 23 54 0 0 chrX 33887218 33887255 -132763041 + AT_rich Low_complexity Low_complexity 1 37 0 8 843 255 61 0 0 chrX 33887288 33887321 -132762975 + (TATG)n Simple_repeat Simple_repeat 3 35 0 8 843 342 0 0 0 chrX 33887711 33887749 -132762547 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 843 354 343 0 0 chrX 33887945 33888047 -132762249 + PB1D10 SINE Alu 13 114 -3 8 843 351 354 0 26 chrX 33888062 33888178 -132762118 + PB1D7 SINE Alu 3 115 -5 8 843 1442 197 138 6 chrX 33888538 33888865 -132761431 + ORR1D2 LTR MaLR 1 370 0 8 843 299 305 162 8 chrX 33888897 33889154 -132761142 - L1ME3B LINE L1 -242 5998 5701 8 843 1483 267 77 70 chrX 33889173 33889885 -132760411 - L1ME3B LINE L1 -818 5328 4612 8 843 369 299 37 0 chrX 33891829 33891936 -132758360 + PB1D10 SINE Alu 5 115 -2 8 843 291 121 0 0 chrX 33892366 33892424 -132757872 + (T)n Simple_repeat Simple_repeat 1 58 0 8 843 23 0 0 0 chrX 33892681 33892704 -132757592 + AT_rich Low_complexity Low_complexity 1 23 0 8 843 1565 263 19 10 chrX 33892840 33893258 -132757038 - Lx9 LINE L1 -171 7473 7052 8 843 283 349 81 23 chrX 33893993 33894166 -132756130 + MER63A DNA AcHobo 23 205 -5 8 843 184 269 77 0 chrX 33894442 33894520 -132755776 + MIR SINE MIR 152 235 -27 8 843 1170 75 0 0 chrX 33894909 33895056 -132755240 - B1_Mm SINE Alu 0 147 1 8 843 232 277 107 25 chrX 33895389 33895511 -132754785 - MER5B DNA MER1_type -46 132 1 8 843 677 277 69 5 chrX 33896453 33896656 -132753640 + ID_B1 SINE B4 9 224 0 8 843 344 157 0 0 chrX 33896787 33896838 -132753458 - ID4_ SINE ID -15 68 18 8 843 220 380 88 9 chrX 33896852 33896966 -132753330 - PB1 SINE Alu -2 125 3 8 843 491 314 18 76 chrX 33896984 33897013 -132753283 - MLT1A1 LTR MaLR -197 211 186 8 843 415 37 0 0 chrX 33897013 33897067 -132753229 + L1Md_F3 LINE L1 6517 6570 -14 8 843 491 314 18 76 chrX 33897067 33897261 -132753035 - MLT1A1 LTR MaLR -223 185 1 8 843 181 212 0 0 chrX 33897261 33897294 -132753002 + MIRb SINE MIR 227 259 -9 8 843 255 240 132 19 chrX 33899560 33899666 -132750630 + MIR3 SINE MIR 85 202 -6 8 843 835 78 146 15 chrX 33900818 33900948 -132749348 + B1_Mus2 SINE Alu 1 147 0 8 843 261 0 0 0 chrX 33900948 33900977 -132749319 + (A)n Simple_repeat Simple_repeat 1 29 0 8 843 913 137 128 23 chrX 33901234 33901442 -132748854 + B3 SINE B2 7 209 -7 8 843 301 382 56 45 chrX 33901444 33901622 -132748674 - MLT1J LTR MaLR -262 250 71 8 843 246 266 12 37 chrX 33903806 33903888 -132746408 + MIRc SINE MIR 68 147 -121 8 843 540 192 29 0 chrX 33903893 33903997 -132746299 + U6 snRNA snRNA 1 107 0 8 843 252 100 0 0 chrX 33905422 33905462 -132744834 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 843 216 305 134 0 chrX 33906906 33906988 -132743308 + PB1 SINE Alu 5 97 -30 8 843 331 331 22 8 chrX 33907019 33907153 -132743143 + B1F SINE Alu 5 140 -9 8 843 213 65 0 0 chrX 33907154 33907185 -132743111 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 843 280 264 27 14 chrX 33907196 33907269 -132743027 + ID4 SINE ID 10 83 0 8 843 627 244 129 36 chrX 33907755 33907980 -132742316 - Lx8 LINE L1 -56 7417 7172 8 843 322 237 39 26 chrX 33908302 33908380 -132741916 - ID2 SINE ID -3 80 2 8 843 1105 59 7 0 chrX 33908593 33908729 -132741567 + B1_Mus2 SINE Alu 2 138 -9 8 843 279 0 0 0 chrX 33908729 33908760 -132741536 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 843 3071 120 107 0 chrX 33908891 33909375 -132740921 - Lx4A LINE L1 -3 7055 6520 8 843 203 88 0 29 chrX 33909460 33909495 -132740801 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 8 843 264 304 0 0 chrX 33909497 33909566 -132740730 + ID4_ SINE ID 15 83 0 8 843 418 241 33 67 chrX 33909728 33909848 -132740448 + PB1D10 SINE Alu 2 117 0 8 843 1172 82 16 21 chrX 33910262 33910450 -132739846 + L1_Mus3 LINE L1 6452 6638 0 8 843 682 187 37 18 chrX 33910550 33910713 -132739583 - Lx5 LINE L1 0 7050 6885 8 843 1663 193 110 33 chrX 33911413 33911804 -132738492 + MTC LTR MaLR 1 421 0 9 843 223 204 0 36 chrX 33912023 33912079 -132738217 + GA-rich Low_complexity Low_complexity 2 55 0 9 843 3358 85 0 5 chrX 33912137 33912584 -132737712 - L1_Mm LINE L1 -935 4948 4504 9 843 7202 100 54 1 chrX 33912578 33913792 -132736504 + L1_Mus4 LINE L1 5371 6636 0 9 843 1380 95 11 0 chrX 33914029 33914218 -132736078 - B2_Mm1t SINE B2 -2 191 1 9 843 1141 82 0 0 chrX 33914592 33914739 -132735557 + B1_Mus1 SINE Alu 2 148 0 9 843 192 40 0 0 chrX 33914740 33914765 -132735531 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 9 843 4581 171 65 43 chrX 33914782 33915671 -132734625 - Lx5 LINE L1 0 7050 6142 9 843 3016 144 21 28 chrX 33915682 33916356 -132733940 + Lx5 LINE L1 5478 6157 -893 9 843 1359 74 17 6 chrX 33916574 33916751 -132733545 + B2_Mm2 SINE B2 2 180 -15 9 843 441 0 0 0 chrX 33916751 33916800 -132733496 + (CA)n Simple_repeat Simple_repeat 2 50 0 9 843 9305 113 24 3 chrX 33917451 33919083 -132731213 - Lx2 LINE L1 0 6997 5327 9 843 180 0 0 0 chrX 33919265 33919285 -132731011 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 9 843 884 258 47 89 chrX 33920896 33921300 -132728996 + MLT1B LTR MaLR 1 387 -3 9 843 474 33 0 0 chrX 33921380 33921440 -132728856 + (CAG)n Simple_repeat Simple_repeat 1 60 0 9 843 511 315 130 25 chrX 33921581 33921858 -132728438 - MTEa LTR MaLR -61 318 13 9 843 351 232 0 14 chrX 33922741 33922811 -132727485 - ID4_ SINE ID -13 70 2 9 843 317 324 42 7 chrX 33922823 33922966 -132727330 - B1F1 SINE Alu 0 149 2 9 843 26 30 0 0 chrX 33922979 33923012 -132727284 + AT_rich Low_complexity Low_complexity 1 33 0 9 843 241 268 34 59 chrX 33923264 33923383 -132726913 - PB1D10 SINE Alu 0 117 2 9 843 698 245 26 26 chrX 33924270 33924459 -132725837 + ORR1E LTR MaLR 1 189 -170 9 843 859 141 0 0 chrX 33924505 33924633 -132725663 + B1_Mur2 SINE Alu 2 129 -20 9 843 296 333 8 26 chrX 33924674 33924791 -132725505 + ORR1E LTR MaLR 265 379 0 9 843 369 0 0 0 chrX 33925640 33925681 -132724615 + (TTA)n Simple_repeat Simple_repeat 1 41 0 9 843 208 336 85 65 chrX 33925688 33925841 -132724455 + MIRb SINE MIR 56 211 -57 9 843 851 278 32 21 chrX 33925855 33926134 -132724162 + B4A SINE B4 8 289 -3 9 843 21 36 0 0 chrX 33926376 33926404 -132723892 + AT_rich Low_complexity Low_complexity 1 28 0 9 843 5127 57 8 0 chrX 33926407 33927053 -132723243 - L1_Mus2 LINE L1 -1 6565 5915 9 843 234 331 63 31 chrX 33928143 33928287 -132722009 - MIR3 SINE MIR -21 187 38 9 843 195 306 75 17 chrX 33928393 33928512 -132721784 - MIRb SINE MIR -53 215 86 9 843 891 186 24 0 chrX 33929309 33929476 -132720820 + Lx4B LINE L1 6848 7018 -40 9 843 421 344 19 0 chrX 33929674 33929834 -132720462 + RSINE1 SINE B4 3 165 0 9 843 343 228 13 0 chrX 33930187 33930266 -132720030 - MIR SINE MIR -179 83 4 9 843 315 0 0 0 chrX 33930519 33930554 -132719742 + (CA)n Simple_repeat Simple_repeat 2 36 0 9 843 1457 248 55 30 chrX 33930627 33931096 -132719200 - MER90a LTR ERV1 -133 481 1 9 843 665 222 146 0 chrX 33931280 33931451 -132718845 - MTD LTR MaLR -17 402 207 9 843 296 296 0 0 chrX 33931734 33931815 -132718481 + PB1D10 SINE Alu 3 83 -34 9 843 2578 124 140 28 chrX 33931815 33932278 -132718018 + Lx3B LINE L1 6456 6970 -3 9 843 358 259 56 28 chrX 33932298 33932313 -132717983 + ID_B1 SINE B4 78 224 0 9 843 607 181 86 8 chrX 33932313 33932441 -132717855 + B1_Mur1 SINE Alu 11 148 -1 9 843 414 57 0 0 chrX 33933339 33933392 -132716904 + (CA)n Simple_repeat Simple_repeat 1 53 0 9 843 30 45 0 0 chrX 33933846 33933890 -132716406 + AT_rich Low_complexity Low_complexity 1 44 0 9 843 964 260 188 21 chrX 33933903 33934508 -132715788 + L1_Rod LINE L1 4559 5264 -583 9 843 533 217 47 119 chrX 33934516 33934751 -132715545 + Lx9 LINE L1 7391 7608 -36 9 843 922 274 13 0 chrX 33934761 33934995 -132715301 - RMER15-int LTR ERVL -617 4382 4146 9 843 6233 289 71 77 chrX 33935009 33937559 -132712737 - RMER15-int LTR ERVL -2447 2552 19 9 843 298 309 39 45 chrX 33937589 33937745 -132712551 - RMER15 LTR ERVL -15 560 406 9 843 423 0 0 0 chrX 33937798 33937845 -132712451 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 843 729 292 102 39 chrX 33938250 33938632 -132711664 + Lx8 LINE L1 7040 7445 -28 9 843 348 99 0 40 chrX 33938727 33938801 -132711495 + (TA)n Simple_repeat Simple_repeat 2 72 0 9 843 315 0 0 0 chrX 33938801 33938836 -132711460 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 843 2394 281 41 71 chrX 33938838 33939310 -132710986 + Lx9 LINE L1 6341 6819 -825 9 843 399 68 0 0 chrX 33939310 33939369 -132710927 + (TG)n Simple_repeat Simple_repeat 2 60 0 9 843 2394 281 41 71 chrX 33939369 33939741 -132710555 + Lx9 LINE L1 6820 7160 -484 9 843 272 218 0 158 chrX 33939760 33939880 -132710416 + RMER1C Other Other 1232 1332 -10 9 843 23 66 0 16 chrX 33940220 33940236 -132710060 + AT_rich Low_complexity Low_complexity 1 16 0 9 843 966 225 14 23 chrX 33940236 33940454 -132709842 - B3 SINE B2 0 216 1 9 843 23 66 0 16 chrX 33940454 33940499 -132709797 + AT_rich Low_complexity Low_complexity 1 45 0 9 843 443 237 195 21 chrX 33940514 33940755 -132709541 + Cheshire DNA MER1_type 2102 2384 -36 9 843 398 275 84 32 chrX 33940838 33940992 -132709304 + B3A SINE B2 2 163 -35 9 843 211 325 9 9 chrX 33942197 33942312 -132707984 + (CAG)n Simple_repeat Simple_repeat 2 116 0 9 843 413 226 40 99 chrX 33942596 33942748 -132707548 - B1F2 SINE Alu -1 148 6 9 843 246 237 34 0 chrX 33942773 33942832 -132707464 - ID_B1 SINE B4 -5 219 159 9 843 261 0 0 0 chrX 33944321 33944350 -132705946 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 843 242 307 27 0 chrX 33945109 33945184 -132705112 + MER33 DNA MER1_type 20 96 -228 9 843 25 51 0 0 chrX 33945232 33945271 -132705025 + AT_rich Low_complexity Low_complexity 1 39 0 9 843 625 271 94 17 chrX 33945316 33945496 -132704800 - B3A SINE B2 -4 194 1 9 843 1674 68 0 68 chrX 33945578 33945815 -132704481 - L1_Mus2 LINE L1 -1 6565 6345 9 843 533 307 7 7 chrX 33946567 33946708 -132703588 - B1F SINE Alu -8 141 1 9 843 22 0 0 0 chrX 33947350 33947372 -132702924 + AT_rich Low_complexity Low_complexity 1 22 0 9 844 7641 59 7 20 chrX 33947652 33948714 -132701582 - L1_Mus2 LINE L1 0 6566 5519 9 844 372 22 0 0 chrX 33948729 33948774 -132701522 + (TG)n Simple_repeat Simple_repeat 1 45 0 9 844 300 288 24 104 chrX 33948886 33948968 -132701328 - L1MA4 LINE L1 -279 6024 5947 9 844 225 0 0 0 chrX 33948968 33948993 -132701303 + (CA)n Simple_repeat Simple_repeat 2 26 0 9 844 459 0 0 0 chrX 33948993 33949043 -132701253 + (GA)n Simple_repeat Simple_repeat 2 52 0 9 844 300 244 11 90 chrX 33949043 33949220 -132701076 - L1MA4 LINE L1 -354 5946 5786 9 844 705 112 92 0 chrX 33949604 33949702 -132700594 - U6 snRNA snRNA 0 107 1 9 844 864 293 50 43 chrX 33949702 33950332 -132699964 - L1MA4 LINE L1 -562 5738 5093 9 844 2541 60 31 9 chrX 33950332 33950654 -132699642 + L1Md_F2 LINE L1 6252 6580 -2 9 844 710 315 64 16 chrX 33950654 33950817 -132699479 - L1MA4 LINE L1 -1051 5092 4923 9 844 662 244 15 0 chrX 33950826 33950961 -132699335 - B1_Mur2 SINE Alu -11 138 2 9 844 1047 177 46 56 chrX 33951873 33952165 -132698131 - LTRIS5 LTR ERV1 0 447 3 9 844 1174 178 62 0 chrX 33952166 33952374 -132697922 - MuRRS4-int LTR ERV1 0 4690 4470 9 844 3951 266 12 17 chrX 33952374 33953400 -132696896 - MuRRS4-int LTR ERV1 -1549 3514 2494 9 844 9477 154 10 26 chrX 33953392 33954985 -132695311 - MuRRS-int LTR ERV1 -1274 3416 1849 9 844 1277 241 80 70 chrX 33954985 33955538 -132694758 - MuRRS4-int LTR ERV1 -4495 568 11 9 844 243 79 0 0 chrX 33956563 33956601 -132693695 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 9 844 916 184 7 0 chrX 33956607 33956754 -132693542 - B1_Mur4 SINE Alu -2 148 1 9 844 192 40 0 0 chrX 33956975 33957000 -132693296 + (TTTTTG)n Simple_repeat Simple_repeat 3 27 0 9 844 1908 172 43 9 chrX 33957125 33957453 -132692843 + RLTR30 LTR ERV1 25 363 -16 9 844 1305 212 161 52 chrX 33957602 33957626 -132692670 - Lx6 LINE L1 -6 7454 7441 9 844 302 0 0 26 chrX 33957631 33957670 -132692626 + (TTTTG)n Simple_repeat Simple_repeat 1 38 0 9 844 1161 71 0 7 chrX 33957670 33957805 -132692491 - B1_Mus1 SINE Alu -13 135 1 9 844 1305 212 161 52 chrX 33957805 33958128 -132692168 - Lx6 LINE L1 -20 7440 7069 9 844 880 158 26 53 chrX 33958160 33958337 -132691959 + ORR1C1 LTR MaLR 41 213 -157 9 844 970 222 133 4 chrX 33958346 33958572 -132691724 - Lx6 LINE L1 -26 7434 7180 9 844 961 204 0 0 chrX 33958575 33958737 -132691559 + ORR1C1 LTR MaLR 204 365 -13 9 844 337 309 13 38 chrX 33958739 33958897 -132691399 - L1M2 LINE L1 -2047 4096 3943 9 844 3110 200 73 11 chrX 33958865 33959536 -132690760 - RMER1B Other Other -14 1052 22 9 844 507 283 17 39 chrX 33959578 33959758 -132690538 - L1_Mur3 LINE L1 -1934 3946 3771 9 844 1225 88 0 0 chrX 33959830 33959978 -132690318 - B1_Mus1 SINE Alu 0 148 1 9 844 455 313 16 73 chrX 33960084 33960273 -132690023 - L1M2 LINE L1 -2415 3728 3546 9 844 4865 56 17 17 chrX 33960273 33960871 -132689425 + L1Md_F2 LINE L1 5972 6569 -13 9 844 455 313 16 73 chrX 33960871 33960929 -132689367 - L1M2 LINE L1 -2598 3545 3495 9 844 715 213 36 7 chrX 33961798 33961935 -132688361 - B1_Mus1 SINE Alu -2 146 6 9 844 1178 276 52 31 chrX 33963045 33963370 -132686926 + MTE2a LTR MaLR 47 378 -1 9 844 1025 140 7 0 chrX 33964320 33964463 -132685833 - B1_Mus1 SINE Alu 0 148 5 9 844 21 0 0 0 chrX 33964552 33964573 -132685723 + AT_rich Low_complexity Low_complexity 1 21 0 9 844 276 239 28 56 chrX 33964765 33964830 -132685466 - MER5B DNA MER1_type 0 178 116 9 844 322 222 0 0 chrX 33964830 33964884 -132685412 + B1F1 SINE Alu 3 56 -93 9 844 196 208 42 0 chrX 33965041 33965089 -132685207 - MER5B DNA MER1_type -126 52 3 9 844 1134 101 107 0 chrX 33965523 33965692 -132684604 + L1_Mus3 LINE L1 6451 6637 -1 9 844 672 195 39 268 chrX 33966352 33966475 -132683821 - B3 SINE B2 0 216 85 9 844 1898 171 9 27 chrX 33966475 33966805 -132683491 + Lx4A LINE L1 6731 7054 -4 9 844 672 195 39 268 chrX 33966805 33966856 -132683440 - B3 SINE B2 -132 84 84 9 844 1057 128 0 11 chrX 33966856 33967038 -132683258 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 9 844 405 0 0 0 chrX 33967038 33967083 -132683213 + (GAAA)n Simple_repeat Simple_repeat 1 45 0 9 844 672 195 39 268 chrX 33967083 33967186 -132683110 - B3 SINE B2 -132 84 2 9 844 330 276 35 0 chrX 33967321 33967408 -132682888 + 5S rRNA rRNA 1 90 -31 1 844 1349 302 52 19 chrX 33968135 33968617 -132681679 + Tigger7 DNA MER2_type 2 499 -1992 1 844 22 0 0 0 chrX 33969819 33969841 -132680455 + AT_rich Low_complexity Low_complexity 1 22 0 1 844 310 264 0 0 chrX 33973332 33973423 -132676873 + (CAT)n Simple_repeat Simple_repeat 1 91 0 1 844 1061 217 28 37 chrX 33974640 33974855 -132675441 - B3 SINE B2 -2 214 2 1 844 708 265 53 18 chrX 33976227 33976396 -132673900 - B3A SINE B2 -22 176 2 1 844 824 108 7 0 chrX 33976675 33976823 -132673473 + (GA)n Simple_repeat Simple_repeat 2 150 0 1 844 520 176 56 0 chrX 33977029 33977154 -132673142 - Lx9 LINE L1 0 7644 7513 1 844 351 0 0 0 chrX 33977157 33977196 -132673100 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 844 1577 158 22 8 chrX 33977201 33977468 -132672828 - Lx9 LINE L1 -179 7465 7195 1 844 667 194 62 0 chrX 33977518 33977647 -132672649 - B3A SINE B2 -61 137 1 1 844 662 272 35 6 chrX 33978109 33978283 -132672013 - RMER30 DNA MER1_type -1 201 23 1 844 982 142 0 26 chrX 33979674 33979826 -132670470 - B1_Mus1 SINE Alu 0 148 1 1 844 5298 108 74 102 chrX 33980055 33980353 -132669943 + RMER17A2 LTR ERVK 1 293 -613 1 844 456 51 0 0 chrX 33980353 33980412 -132669884 + (TC)n Simple_repeat Simple_repeat 1 59 0 1 844 5298 108 74 102 chrX 33980412 33981045 -132669251 + RMER17A2 LTR ERVK 294 905 -1 1 844 1660 174 32 5 chrX 33981494 33981840 -132668456 + L1Md_T LINE L1 220 808 -5919 1 844 2508 51 0 0 chrX 33981840 33982132 -132668164 + L1Md_A LINE L1 6291 6582 0 1 844 36050 42 3 0 chrX 33982135 33986576 -132663720 + L1Md_T LINE L1 996 5589 -297 1 844 9000 34 0 0 chrX 33986576 33987572 -132662724 + L1Md_T LINE L1 5590 6585 0 1 844 33135 73 7 1 chrX 33987574 33992006 -132658290 + L1Md_F2 LINE L1 996 5589 -297 1 844 8136 70 0 9 chrX 33992006 33993009 -132657287 + L1Md_F2 LINE L1 5590 6583 -2 1 844 1653 42 11 0 chrX 33993087 33993277 -132657019 + B2_Mm1a SINE B2 2 193 0 1 844 517 177 13 0 chrX 33993339 33993418 -132656878 + ID4_ SINE ID 4 83 0 1 844 291 28 0 0 chrX 33993733 33993769 -132656527 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 844 2851 156 3 93 chrX 33994263 33994842 -132655454 + RLTR24 LTR ERV1 1 527 -2 1 844 315 284 124 0 chrX 33994906 33995019 -132655277 + B1F SINE Alu 1 128 -21 1 844 246 310 14 14 chrX 33995494 33995566 -132654730 + ID2 SINE ID 1 72 -11 1 844 396 295 239 5 chrX 33995592 33995776 -132654520 + MIRb SINE MIR 31 257 -11 1 844 477 294 34 0 chrX 33995893 33996039 -132654257 + MIRc SINE MIR 11 161 -107 1 844 769 300 76 19 chrX 33996726 33997154 -132653142 + L1MB5 LINE L1 5753 6180 0 1 844 3842 83 120 0 chrX 33997155 33997820 -132652476 + L1Md_F LINE L1 591 1331 -5393 1 844 16185 77 5 1 chrX 33997827 34000000 -132650296 + L1Md_F LINE L1 1450 3631 -2252 1 844 725 103 0 0 chrX 34000000 34000107 -132650189 + L1Md_F2 LINE L1 3632 3738 -2145 1 844 38871 11 0 7 chrX 34000098 34005502 -132644794 + L1Md_A LINE L1 225 5586 -297 2 844 9069 10 0 0 chrX 34005502 34006498 -132643798 + L1Md_A LINE L1 5587 6582 0 2 844 13544 57 12 92 chrX 34006677 34007700 -132642596 + L1Md_F2 LINE L1 3710 4737 -1146 1 844 228 35 0 0 chrX 34007700 34007729 -132642567 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 3 844 13544 57 12 92 chrX 34007729 34008745 -132641551 + L1Md_F2 LINE L1 4738 5586 -297 1 844 8226 46 5 0 chrX 34008745 34009726 -132640570 + L1Md_F2 LINE L1 5587 6572 -10 1 844 446 313 37 73 chrX 34011031 34011324 -132638972 + B4A SINE B4 2 278 -14 4 844 226 121 259 0 chrX 34011453 34011511 -132638785 + ORR1B1-int LTR MaLR 1298 1370 0 5 844 1736 165 38 0 chrX 34011511 34011827 -132638469 + ORR1B1 LTR MaLR 1 328 -66 5 844 310 99 17 49 chrX 34011823 34011898 -132638398 + MTD LTR MaLR 19 84 -294 6 844 1357 122 43 25 chrX 34011898 34011967 -132638329 + RLTR20A LTR ERVK 3 72 -469 7 844 441 0 0 0 chrX 34011967 34012016 -132638280 + (CA)n Simple_repeat Simple_repeat 1 49 0 8 844 1357 122 43 25 chrX 34012016 34012181 -132638115 + RLTR20A LTR ERVK 73 241 -300 7 844 697 73 0 0 chrX 34012181 34012277 -132638019 + B1_Mus1 SINE Alu 1 96 -52 9 844 223 240 0 20 chrX 34012755 34012806 -132637490 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1 844 510 250 170 7 chrX 34013439 34013580 -132636716 + B3A SINE B2 5 168 -30 1 844 459 0 0 0 chrX 34013591 34013642 -132636654 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 844 404 281 41 41 chrX 34013743 34013888 -132636408 - B1F SINE Alu -3 146 2 1 844 764 150 45 0 chrX 34014020 34014153 -132636143 - B1_Mur4 SINE Alu -5 145 7 1 844 1728 213 51 5 chrX 34014180 34014553 -132635743 + MTD LTR MaLR 30 419 0 6 844 1354 156 24 0 chrX 34015400 34015611 -132634685 - B3 SINE B2 0 216 1 1 844 399 324 7 7 chrX 34015621 34015767 -132634529 - MIRb SINE MIR -73 195 50 1 844 2326 136 14 8 chrX 34015767 34016130 -132634166 + ORR1B2 LTR MaLR 1 365 -2 1 844 556 147 42 0 chrX 34016134 34016229 -132634067 + ORR1B2-int LTR MaLR 3 101 -1408 1 844 1462 12 0 0 chrX 34016229 34016397 -132633899 - L1Md_A LINE L1 -487 5396 5229 1 844 1669 11 0 0 chrX 34016396 34016578 -132633718 + L1Md_A LINE L1 5405 5586 -297 1 844 9016 11 1 0 chrX 34016578 34017573 -132632723 + L1Md_A LINE L1 5587 6582 0 1 844 7151 149 45 7 chrX 34017608 34018979 -132631317 + ORR1B2-int LTR MaLR 88 1509 0 1 844 2010 142 83 3 chrX 34018981 34019319 -132630977 + ORR1B2 LTR MaLR 3 367 0 1 844 284 113 0 36 chrX 34020164 34020219 -132630077 + (CATA)n Simple_repeat Simple_repeat 4 56 0 1 844 481 169 0 0 chrX 34020394 34020483 -132629813 + Lx9 LINE L1 7555 7643 -1 2 844 341 93 19 0 chrX 34020720 34020774 -132629522 + (TCTG)n Simple_repeat Simple_repeat 4 58 0 2 844 634 236 48 14 chrX 34020774 34020920 -132629376 - RSINE1 SINE B4 -13 152 2 2 844 684 234 157 0 chrX 34021532 34021767 -132628529 - Lx9 LINE L1 -2 7642 7371 2 844 1041 240 106 8 chrX 34021768 34022024 -132628272 - Lx8 LINE L1 -62 7411 7131 2 844 693 216 289 33 chrX 34022081 34022386 -132627910 + RCHARR1 DNA MER1_type 95 477 -497 2 844 213 39 0 0 chrX 34022392 34022418 -132627878 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 844 654 223 43 14 chrX 34022418 34022552 -132627744 - B1F2 SINE Alu -6 143 5 2 844 799 171 44 12 chrX 34022574 34022734 -132627562 + ORR1A3 LTR MaLR 1 165 -161 2 844 1924 145 3 9 chrX 34022734 34023074 -132627222 + ORR1A1 LTR MaLR 1 338 -8 2 844 207 200 22 0 chrX 34024661 34024706 -132625590 + (CTTTG)n Simple_repeat Simple_repeat 3 48 0 3 844 349 226 21 11 chrX 34024729 34024823 -132625473 - PB1D10 SINE Alu -18 99 5 3 844 207 0 0 0 chrX 34025180 34025203 -132625093 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 3 844 250 264 14 0 chrX 34025206 34025278 -132625018 - ID_B1 SINE B4 -68 156 84 3 844 210 340 29 39 chrX 34025484 34025588 -132624708 - PB1D10 SINE Alu -4 113 11 3 844 215 327 66 19 chrX 34025655 34025761 -132624535 - PB1D10 SINE Alu -6 111 1 3 844 250 280 39 20 chrX 34025843 34025945 -132624351 - PB1D7 SINE Alu -15 105 2 3 844 226 220 0 0 chrX 34026007 34026060 -132624236 - PB1D7 SINE Alu -12 115 63 3 844 3242 59 10 0 chrX 34026079 34026471 -132623825 + MTA_Mm LTR MaLR 1 396 0 3 844 1460 70 5 11 chrX 34026549 34026738 -132623558 - B2_Mm1t SINE B2 -5 188 1 3 844 25 0 0 0 chrX 34026745 34026770 -132623526 + AT_rich Low_complexity Low_complexity 1 25 0 4 844 265 309 10 30 chrX 34026799 34026899 -132623397 - PB1D10 SINE Alu -19 98 1 4 844 389 255 11 0 chrX 34026981 34027075 -132623221 - PB1D10 SINE Alu -13 104 10 4 844 279 321 46 0 chrX 34027118 34027227 -132623069 - PB1D10 SINE Alu -3 114 1 4 844 282 312 21 0 chrX 34027135 34027228 -132623068 - ID_B1 SINE B4 -49 175 81 4 844 1660 178 10 0 chrX 34028416 34028720 -132621576 - Lx3C LINE L1 -753 6223 5917 4 844 3890 169 26 19 chrX 34028725 34029455 -132620841 + Lx3C LINE L1 6238 6972 -4 4 844 210 265 0 0 chrX 34030289 34030338 -132619958 + (TTCA)n Simple_repeat Simple_repeat 3 51 0 4 844 1354 96 21 0 chrX 34030668 34030856 -132619440 - B2_Mm2 SINE B2 -2 193 2 4 844 26 30 0 0 chrX 34031082 34031115 -132619181 + AT_rich Low_complexity Low_complexity 1 33 0 4 844 312 374 24 0 chrX 34032646 34032812 -132617484 + L2 LINE L2 2093 2262 -1157 4 844 509 254 25 15 chrX 34032844 34033040 -132617256 - MER33 DNA MER1_type -11 313 116 5 844 396 0 0 0 chrX 34033805 34033849 -132616447 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 844 827 208 149 0 chrX 34034126 34034367 -132615929 + Lx9 LINE L1 7368 7644 0 5 844 434 279 112 22 chrX 34034475 34034677 -132615619 + MLT1E LTR MaLR 168 403 -250 5 844 286 269 30 0 chrX 34034674 34034741 -132615555 + ID_B1 SINE B4 73 141 -83 5 844 358 258 41 41 chrX 34034688 34034785 -132615511 + PB1 SINE Alu 8 104 -16 5 844 531 221 0 0 chrX 34034855 34034959 -132615337 + B1_Mur3 SINE Alu 3 106 -43 5 844 811 0 20 0 chrX 34034973 34035072 -132615224 + (TAGA)n Simple_repeat Simple_repeat 1 101 0 5 844 398 20 20 0 chrX 34035256 34035307 -132614989 + (TTTG)n Simple_repeat Simple_repeat 4 55 0 5 844 919 251 8 60 chrX 34036317 34036567 -132613729 + Lx8 LINE L1 6546 6782 -691 5 844 707 171 0 72 chrX 34036637 34036776 -132613520 + B1_Mur4 SINE Alu 1 129 -21 6 844 948 297 84 44 chrX 34036846 34037434 -132612862 + Lx9 LINE L1 5295 5947 -1697 6 844 504 0 0 0 chrX 34038183 34038239 -132612057 + (CA)n Simple_repeat Simple_repeat 2 57 0 6 844 525 308 0 79 chrX 34038777 34038992 -132611304 + B3A SINE B2 1 198 0 6 844 511 322 17 0 chrX 34039323 34039500 -132610796 - RMER30 DNA MER1_type -18 184 5 6 844 564 248 27 7 chrX 34039492 34039638 -132610658 + B4 SINE B4 134 282 -10 6 844 795 75 0 0 chrX 34039647 34039767 -132610529 + (CA)n Simple_repeat Simple_repeat 2 121 0 6 844 340 263 59 29 chrX 34040311 34040413 -132609883 + PB1D10 SINE Alu 8 112 -5 6 844 522 197 161 8 chrX 34040425 34040543 -132609753 + B1_Mur2 SINE Alu 1 136 -13 6 844 654 13 0 0 chrX 34040548 34040623 -132609673 + (GA)n Simple_repeat Simple_repeat 2 76 0 6 844 197 178 0 22 chrX 34040634 34040680 -132609616 + GA-rich Low_complexity Low_complexity 4 48 0 7 844 653 269 5 39 chrX 34041378 34041583 -132608713 - B3A SINE B2 0 198 1 7 844 625 99 0 26 chrX 34042125 34042239 -132608057 + (TTTTG)n Simple_repeat Simple_repeat 4 114 0 7 844 299 230 42 50 chrX 34042239 34042358 -132607938 - B4A SINE B4 -68 224 107 7 844 1136 98 29 0 chrX 34042993 34043167 -132607129 + URR1A DNA MER1_type 46 224 -2 7 844 282 306 61 0 chrX 34043174 34043272 -132607024 + MIRb SINE MIR 70 173 -95 7 844 192 296 158 9 chrX 34043480 34043601 -132606695 + MIR SINE MIR 41 170 -92 7 844 21 36 0 0 chrX 34043934 34043962 -132606334 + AT_rich Low_complexity Low_complexity 1 28 0 7 844 31 26 0 0 chrX 34044099 34044137 -132606159 + AT_rich Low_complexity Low_complexity 1 38 0 7 844 357 239 138 0 chrX 34044166 34044275 -132606021 - MER3 DNA MER1_type -19 190 67 7 844 2654 39 0 0 chrX 34044381 34044692 -132605604 - L1Md_F2 LINE L1 -111 6471 6161 8 844 896 74 72 14 chrX 34044693 34044831 -132605465 + L1Md_F2 LINE L1 6431 6576 -6 8 844 7936 57 0 0 chrX 34044834 34045802 -132604494 + L1Md_F2 LINE L1 4619 5586 -297 8 844 8585 30 2 1 chrX 34045802 34046797 -132603499 + L1Md_F2 LINE L1 5587 6582 0 8 844 1173 49 0 0 chrX 34046798 34046942 -132603354 + B1_Mus2 SINE Alu 4 147 0 8 844 508 282 8 0 chrX 34046972 34047096 -132603200 - MER20 DNA MER1_type -79 140 16 8 844 248 53 0 26 chrX 34047412 34047451 -132602845 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 8 844 1245 28 0 0 chrX 34047454 34047597 -132602699 - B1_Mus1 SINE Alu -5 143 1 8 844 679 223 168 57 chrX 34047802 34048064 -132602232 + B4A SINE B4 2 292 0 8 844 2044 223 107 30 chrX 34048764 34049393 -132600903 + Lx9 LINE L1 6967 7643 -1 8 844 1080 191 19 19 chrX 34049407 34049621 -132600675 - B3 SINE B2 -2 214 1 8 844 825 251 15 20 chrX 34051488 34051687 -132598609 - ID_B1 SINE B4 -20 204 7 8 844 344 316 32 0 chrX 34052777 34052872 -132597424 + PB1D10 SINE Alu 15 112 -5 9 844 253 0 54 0 chrX 34052973 34053010 -132597286 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 9 844 217 282 16 141 chrX 34054456 34054584 -132595712 + PB1 SINE Alu 13 124 -3 9 844 211 222 36 18 chrX 34054609 34054664 -132595632 + ID4_ SINE ID 25 80 -3 9 844 288 0 0 0 chrX 34054911 34054943 -132595353 + (CA)n Simple_repeat Simple_repeat 2 33 0 9 844 277 160 93 0 chrX 34055448 34055523 -132594773 - Tigger7 DNA MER2_type -148 2343 2262 9 844 483 48 0 0 chrX 34055537 34055599 -132594697 + (TG)n Simple_repeat Simple_repeat 2 63 0 9 844 239 289 53 0 chrX 34055603 34055679 -132594617 - Tigger7 DNA MER2_type -2411 80 1 9 844 234 238 15 31 chrX 34055714 34055779 -132594517 + CT-rich Low_complexity Low_complexity 1 64 0 9 844 350 123 358 0 chrX 34056763 34056844 -132593452 - URR1B DNA MER1_type -115 110 1 9 844 454 235 59 0 chrX 34057002 34057104 -132593192 - PB1D10 SINE Alu -9 108 1 9 844 342 0 0 0 chrX 34057199 34057237 -132593059 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 844 366 312 85 33 chrX 34057340 34057687 -132592609 - RMER10A LTR ERVL -13 429 50 1 844 207 0 0 0 chrX 34057832 34057855 -132592441 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1 844 4740 134 65 30 chrX 34057910 34058769 -132591527 + RMER19B LTR ERVK 2 890 -12 1 844 596 307 12 0 chrX 34058784 34058950 -132591346 - B3A SINE B2 -30 168 1 1 844 1036 109 20 0 chrX 34059017 34059164 -132591132 + B1_Mur4 SINE Alu 1 150 0 1 844 1183 227 51 42 chrX 34059318 34059649 -132590647 - MTE2b LTR MaLR -1 378 45 1 844 372 43 0 0 chrX 34059963 34060009 -132590287 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 844 319 258 86 0 chrX 34060521 34060614 -132589682 + ID_B1 SINE B4 95 195 -29 1 844 736 285 92 27 chrX 34060841 34061242 -132589054 + Lx7 LINE L1 5590 6016 -1680 1 844 181 224 67 33 chrX 34061368 34061428 -132588868 + MIRb SINE MIR 61 122 -146 1 844 301 348 20 47 chrX 34061780 34061928 -132588368 + MIRb SINE MIR 68 211 -57 1 844 209 288 37 12 chrX 34062308 34062389 -132587907 + MIRc SINE MIR 76 158 -110 1 844 765 192 121 8 chrX 34062515 34062849 -132587447 + L1M3 LINE L1 5149 5503 -676 1 844 1580 38 0 16 chrX 34063016 34063205 -132587091 + B2_Mm1t SINE B2 2 187 -6 1 844 23 0 0 0 chrX 34063209 34063232 -132587064 + AT_rich Low_complexity Low_complexity 1 23 0 1 844 500 245 41 20 chrX 34063245 34063391 -132586905 + B1F SINE Alu 1 149 0 1 844 245 224 25 50 chrX 34063425 34063505 -132586791 + ID2 SINE ID 5 82 -1 1 844 295 265 15 0 chrX 34063505 34063573 -132586723 + GA-rich Low_complexity Low_complexity 1 69 0 1 844 428 220 8 0 chrX 34064894 34065012 -132585284 + GA-rich Low_complexity Low_complexity 3 121 0 1 844 332 325 24 54 chrX 34065473 34065639 -132584657 + MIR SINE MIR 14 174 -88 1 844 432 0 0 0 chrX 34066016 34066064 -132584232 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 844 199 277 84 11 chrX 34066206 34066301 -132583995 + MIR3 SINE MIR 88 189 -19 1 844 976 269 76 25 chrX 34067368 34067722 -132582574 - MTE2b LTR MaLR -4 375 4 1 844 273 119 0 0 chrX 34067766 34067808 -132582488 + (GAAAA)n Simple_repeat Simple_repeat 4 45 0 1 844 571 312 10 19 chrX 34068152 34068358 -132581938 + B4A SINE B4 2 205 -87 1 844 224 289 102 42 chrX 34068864 34069030 -132581266 + L2 LINE L2 2877 3052 -367 1 844 360 218 13 13 chrX 34069757 34069836 -132580460 + B4A SINE B4 6 84 -208 1 844 261 57 0 0 chrX 34069880 34069915 -132580381 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 844 277 391 0 26 chrX 34070671 34070784 -132579512 - PB1D10 SINE Alu -7 110 1 1 844 524 233 0 0 chrX 34070793 34070909 -132579387 - ID_B1 SINE B4 0 224 109 1 844 354 270 14 14 chrX 34071200 34071307 -132578989 - MIRb SINE MIR -145 117 13 1 844 218 268 18 0 chrX 34071337 34071393 -132578903 + MER5A DNA MER1_type 66 122 -67 1 844 275 293 12 0 chrX 34071537 34071619 -132578677 + ID_B1 SINE B4 93 175 -49 1 844 564 247 46 7 chrX 34071641 34071815 -132578481 + L1M2 LINE L1 5128 5323 -820 1 844 309 273 13 13 chrX 34071964 34072042 -132578254 + 4.5SRNA scRNA scRNA 6 83 -11 1 844 546 16 0 0 chrX 34072042 34072105 -132578191 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 844 402 108 0 0 chrX 34072105 34072179 -132578117 + (GA)n Simple_repeat Simple_repeat 1 74 0 1 844 201 259 0 18 chrX 34072202 34072257 -132578039 + MIR SINE MIR 132 185 -77 1 844 391 282 0 25 chrX 34073217 34073337 -132576959 - PB1D10 SINE Alu 0 117 1 1 844 905 279 84 78 chrX 34073481 34074017 -132576279 - RCHARR1 DNA MER1_type -297 677 139 1 844 1022 149 14 95 chrX 34074402 34074624 -132575672 - URR1A DNA MER1_type -22 204 1 1 844 195 42 0 0 chrX 34075755 34075779 -132574517 + (GAGAA)n Simple_repeat Simple_repeat 1 24 0 1 844 760 242 5 33 chrX 34075814 34075998 -132574298 - B3A SINE B2 -16 182 4 1 844 586 188 0 83 chrX 34076033 34076178 -132574118 - B1_Mur1 SINE Alu 0 149 17 1 844 1514 284 55 27 chrX 34076346 34077053 -132573243 - Lx6 LINE L1 -1361 6099 5378 1 844 24 0 0 0 chrX 34077415 34077439 -132572857 + AT_rich Low_complexity Low_complexity 1 24 0 1 844 1580 248 161 44 chrX 34077502 34078087 -132572209 + L1MD1 LINE L1 4293 4956 -1190 1 844 3518 33 0 0 chrX 34078087 34078483 -132571813 + MTA_Mm LTR MaLR 1 396 0 1 105 1580 248 161 44 chrX 34078483 34078790 -132571506 + L1MD1 LINE L1 4957 5290 -856 1 845 10137 86 2 4 chrX 34078896 34081002 -132569294 - L1_Mus1 LINE L1 0 6567 4468 1 845 2180 266 66 65 chrX 34081352 34081730 -132568566 + L1MD1 LINE L1 5319 5696 -546 1 845 348 77 0 0 chrX 34081730 34081782 -132568514 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 845 2180 266 66 65 chrX 34081782 34082140 -132568156 + L1MD1 LINE L1 5697 6052 -190 1 845 5270 56 14 6 chrX 34082140 34082806 -132567490 + L1Md_F2 LINE L1 5900 6570 -12 1 845 2180 266 66 65 chrX 34082806 34082989 -132567307 + L1MD1 LINE L1 6053 6240 -2 1 845 7682 28 7 19 chrX 34083093 34084009 -132566287 - L1Md_F2 LINE L1 -1 6581 5677 1 845 3282 51 2 0 chrX 34084132 34084527 -132565769 - MTA_Mm LTR MaLR 0 396 1 1 845 7578 82 8 80 chrX 34084527 34085710 -132564586 - MTA_Mm-int LTR MaLR 0 1098 1 1 845 2770 26 168 0 chrX 34085710 34086049 -132564247 - MTA_Mm LTR MaLR 0 396 1 1 845 396 174 0 115 chrX 34086159 34086263 -132564033 + MT2B LTR ERVL 173 264 -337 1 845 945 48 0 0 chrX 34086171 34086297 -132563999 + B1_Mus1 SINE Alu 22 147 -1 1 845 207 0 0 0 chrX 34086588 34086611 -132563685 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1 845 231 279 0 0 chrX 34086611 34086672 -132563624 + ID4 SINE ID 4 64 -19 1 845 459 291 217 59 chrX 34086782 34087174 -132563122 - MER21B LTR ERV1 -85 778 322 1 845 860 120 8 0 chrX 34087174 34087307 -132562989 - ORR1A2 LTR MaLR 0 327 194 1 845 386 319 85 118 chrX 34087385 34087751 -132562545 + ORR1E LTR MaLR 6 359 0 1 845 658 184 8 39 chrX 34088222 34088352 -132561944 + B1_Mur3 SINE Alu 5 130 -19 1 845 585 42 0 0 chrX 34088357 34088429 -132561867 + (GA)n Simple_repeat Simple_repeat 1 72 0 1 845 1804 112 261 0 chrX 34088452 34088766 -132561530 - RMER10B LTR ERVL 0 398 3 1 845 387 0 0 0 chrX 34089295 34089338 -132560958 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 845 231 238 93 23 chrX 34089340 34089426 -132560870 + RLTR23 LTR ERV1 339 430 0 1 845 326 110 183 99 chrX 34089430 34089523 -132560773 + RMER10A LTR ERVL 261 352 -90 1 845 446 0 0 18 chrX 34089523 34089578 -132560718 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 845 326 110 183 99 chrX 34089578 34089615 -132560681 + RMER10A LTR ERVL 353 401 -41 1 845 1818 135 22 58 chrX 34089615 34090032 -132560264 + RMER17C LTR ERVK 1 402 -8 1 845 28 29 0 0 chrX 34090082 34090117 -132560179 + AT_rich Low_complexity Low_complexity 1 35 0 1 845 1394 189 124 14 chrX 34090186 34090541 -132559755 - RMER10A LTR ERVL -30 412 19 1 845 23 0 0 0 chrX 34090628 34090651 -132559645 + AT_rich Low_complexity Low_complexity 1 23 0 1 845 537 110 0 52 chrX 34090651 34090747 -132559549 - B2_Mm2 SINE B2 -103 92 2 1 845 23 0 0 0 chrX 34091180 34091203 -132559093 + AT_rich Low_complexity Low_complexity 1 23 0 1 845 227 260 19 65 chrX 34092599 34092706 -132557590 - L2a LINE L2 -48 3378 3277 1 845 993 124 0 7 chrX 34092973 34093127 -132557169 + B2_Mm2 SINE B2 6 158 -37 1 845 360 0 0 0 chrX 34093127 34093167 -132557129 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 1 845 23 0 0 0 chrX 34093285 34093308 -132556988 + AT_rich Low_complexity Low_complexity 1 23 0 1 845 436 219 37 45 chrX 34093440 34093574 -132556722 - Lx8 LINE L1 -326 7147 7015 1 845 1478 193 35 43 chrX 34093576 34093959 -132556337 + MTC LTR MaLR 1 379 0 1 845 585 266 204 17 chrX 34094089 34094437 -132555859 - L1MA8 LINE L1 -281 6010 5598 1 845 271 281 112 12 chrX 34094453 34094584 -132555712 + L1M2 LINE L1 4293 4437 -1706 1 845 4466 72 132 15 chrX 34094584 34094958 -132555338 - RMER17A LTR ERVK 0 751 366 1 845 1202 17 11 28 chrX 34094958 34095136 -132555160 + (GGAGA)n Simple_repeat Simple_repeat 2 176 0 1 845 4466 72 132 15 chrX 34095136 34095433 -132554863 - RMER17A LTR ERVK -386 365 2 1 845 271 281 112 12 chrX 34095433 34095470 -132554826 + L1M2 LINE L1 4438 4477 -1666 1 845 377 278 52 9 chrX 34095481 34095597 -132554699 + B1F SINE Alu 21 141 -8 1 845 326 267 27 0 chrX 34095612 34095687 -132554609 + ID4_ SINE ID 4 80 -3 1 845 1424 289 104 49 chrX 34095689 34095972 -132554324 + L1M2 LINE L1 4478 4759 -1384 1 845 1231 151 43 5 chrX 34095972 34096179 -132554117 + B3 SINE B2 1 215 -1 1 845 1424 284 90 38 chrX 34096179 34096872 -132553424 + L1M2 LINE L1 4760 5505 -663 1 845 1621 216 259 8 chrX 34096869 34097368 -132552928 + Lx6 LINE L1 6810 7433 -27 1 845 332 344 23 8 chrX 34097468 34097597 -132552699 - RSINE1 SINE B4 -10 155 25 1 845 302 211 0 13 chrX 34097622 34097699 -132552597 - Lx4B LINE L1 -5 7053 6978 1 845 450 245 92 40 chrX 34097918 34098169 -132552127 + L1MD2 LINE L1 5839 6094 -85 1 845 924 137 242 0 chrX 34098482 34098664 -132551632 - URR1A DNA MER1_type 0 226 1 1 845 1898 255 102 66 chrX 34099037 34099381 -132550915 - L1MC1 LINE L1 -18 6315 5937 1 845 5091 45 0 37 chrX 34099381 34100026 -132550270 - L1Md_F2 LINE L1 -14 6568 5948 1 845 1898 255 102 66 chrX 34100026 34100499 -132549797 - L1MC1 LINE L1 -397 5936 5469 1 845 217 324 0 0 chrX 34100518 34100592 -132549704 - ID4_ SINE ID 0 83 10 1 845 324 216 196 0 chrX 34100596 34100693 -132549603 - L1MC1 LINE L1 -899 5434 5319 1 845 240 35 0 0 chrX 34100757 34100786 -132549510 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 845 1197 86 96 41 chrX 34100800 34100917 -132549379 - Lx LINE L1 -7 6647 6535 1 845 195 42 0 0 chrX 34100917 34100941 -132549355 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 1 845 1197 86 96 41 chrX 34100941 34101042 -132549254 - Lx LINE L1 -120 6534 6418 1 845 618 271 33 125 chrX 34101051 34101234 -132549062 - L1MC1 LINE L1 -860 5286 5135 1 845 1076 71 43 0 chrX 34101234 34101375 -132548921 - B1_Mus2 SINE Alu 0 147 1 1 845 618 271 33 125 chrX 34101375 34101520 -132548776 - L1MC1 LINE L1 -1012 5134 4988 1 845 186 208 0 0 chrX 34101707 34101755 -132548541 + GA-rich Low_complexity Low_complexity 1 48 0 1 845 315 324 122 34 chrX 34101785 34102047 -132548249 + MER90a LTR ERV1 241 525 -89 2 845 225 0 0 0 chrX 34102259 34102284 -132548012 + (A)n Simple_repeat Simple_repeat 1 25 0 2 845 22 0 0 0 chrX 34102944 34102966 -132547330 + AT_rich Low_complexity Low_complexity 1 22 0 2 845 239 243 83 55 chrX 34103032 34103141 -132547155 - Lx8 LINE L1 -73 7400 7289 2 845 469 291 35 35 chrX 34103244 34103500 -132546796 - L1M4 LINE L1 -2415 3731 3476 2 845 4317 182 32 6 chrX 34103771 34104580 -132545716 + Lx2B LINE L1 6169 6998 -2 2 845 1349 286 105 27 chrX 34105176 34105993 -132544303 - L1MD LINE L1 -2685 3461 2581 2 845 429 81 0 0 chrX 34106939 34107001 -132543295 + (GGA)n Simple_repeat Simple_repeat 3 64 0 2 845 268 83 42 0 chrX 34107169 34107217 -132543079 + (TTG)n Simple_repeat Simple_repeat 2 51 0 2 845 251 303 30 10 chrX 34107217 34107310 -132542986 - PB1D10 SINE Alu -9 108 14 2 845 405 0 0 0 chrX 34107643 34107688 -132542608 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 845 334 283 248 0 chrX 34107725 34107838 -132542458 - B4 SINE B4 -47 245 105 2 845 1076 208 70 21 chrX 34109427 34109712 -132540584 + L1MB8 LINE L1 5879 6177 -1 2 845 183 100 0 0 chrX 34109898 34109928 -132540368 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 845 573 266 182 24 chrX 34110893 34111140 -132539156 + B4 SINE B4 1 286 -6 2 845 200 257 14 0 chrX 34111160 34111230 -132539066 + (CATA)n Simple_repeat Simple_repeat 1 71 0 2 845 617 217 0 0 chrX 34111282 34111411 -132538885 + B1_Mur4 SINE Alu 22 150 0 2 845 889 252 40 0 chrX 34111411 34111613 -132538683 - B3 SINE B2 -6 210 1 2 845 335 354 0 0 chrX 34111845 34111941 -132538355 - PB1 SINE Alu -31 96 1 2 845 395 356 79 8 chrX 34112458 34112699 -132537597 + MIR SINE MIR 1 258 -4 2 845 1529 239 33 11 chrX 34112938 34113297 -132536999 + ORR1D2 LTR MaLR 2 368 -2 2 845 420 221 0 69 chrX 34113482 34113584 -132536712 + PB1D10 SINE Alu 23 117 0 2 845 2428 71 0 0 chrX 34114096 34114404 -132535892 + L1Md_F2 LINE L1 5932 6239 -343 2 845 1523 88 9 27 chrX 34114404 34114626 -132535670 + L1Md_F2 LINE L1 6365 6582 0 2 845 192 77 0 0 chrX 34114677 34114703 -132535593 + (ATTG)n Simple_repeat Simple_repeat 2 27 0 2 845 1245 231 66 0 chrX 34114709 34115012 -132535284 - Lx3C LINE L1 -19 6957 6635 2 845 4460 43 14 2 chrX 34115369 34115885 -132534411 + L1Md_F2 LINE L1 6061 6582 0 2 845 945 214 128 5 chrX 34116065 34116253 -132534043 - B3 SINE B2 -5 211 1 2 845 277 145 51 38 chrX 34116610 34116689 -132533607 + T-rich Low_complexity Low_complexity 2 81 0 2 845 2153 214 43 34 chrX 34116714 34117251 -132533045 + L1_Rod LINE L1 5276 5817 -30 2 845 277 403 15 7 chrX 34117371 34117506 -132532790 + Lx8 LINE L1 7199 7334 -139 2 845 288 0 0 0 chrX 34117509 34117541 -132532755 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 845 743 165 86 8 chrX 34117621 34117749 -132532547 + B1F2 SINE Alu 1 138 -11 2 845 635 235 76 0 chrX 34117829 34117961 -132532335 + B1_Mur1 SINE Alu 1 142 -7 2 845 3162 282 33 40 chrX 34118042 34119132 -132531164 - Lx9 LINE L1 -154 7490 6408 2 845 995 123 20 20 chrX 34119132 34119281 -132531015 - B1_Mur3 SINE Alu 0 149 1 2 845 189 0 0 0 chrX 34119344 34119365 -132530931 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 845 1147 264 28 14 chrX 34119393 34119677 -132530619 - B4A SINE B4 -4 288 1 2 845 21 36 0 0 chrX 34119931 34119959 -132530337 + AT_rich Low_complexity Low_complexity 1 28 0 2 845 307 292 0 0 chrX 34120026 34120098 -132530198 + MIR SINE MIR 72 143 -119 2 845 408 40 0 0 chrX 34120199 34120249 -132530047 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 845 2645 105 23 26 chrX 34120722 34121113 -132529183 + Lx3C LINE L1 6575 6964 -12 2 845 369 0 0 0 chrX 34121113 34121154 -132529142 + (TAA)n Simple_repeat Simple_repeat 2 42 0 2 845 5782 128 61 20 chrX 34121154 34122152 -132528144 - MTC-int LTR MaLR -214 1044 6 2 845 229 222 78 16 chrX 34122791 34122855 -132527441 - L1MC LINE L1 -1904 4242 4175 2 845 1041 194 36 5 chrX 34123005 34123197 -132527099 - B3 SINE B2 -18 198 1 2 845 396 0 0 0 chrX 34123206 34123250 -132527046 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 845 1261 48 0 14 chrX 34123250 34123388 -132526908 - B1_Mm SINE Alu -9 138 1 2 845 352 273 146 34 chrX 34123404 34123609 -132526687 - Lx8 LINE L1 -3 7470 7243 2 845 362 131 13 17 chrX 34123609 34123718 -132526578 - B2_Mm2 SINE B2 -5 190 47 2 845 1210 141 11 0 chrX 34123769 34123946 -132526350 - B2_Mm1t SINE B2 -14 179 1 2 845 4724 76 4 0 chrX 34123992 34124790 -132525506 - L1_Mus1 LINE L1 -500 6067 5266 2 845 4042 73 0 2 chrX 34124790 34125281 -132525015 + L1_Mus1 LINE L1 6077 6566 -1 2 845 207 0 0 0 chrX 34125444 34125467 -132524829 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 845 1168 70 0 7 chrX 34125467 34125610 -132524686 - B1_Mm SINE Alu -3 144 3 2 845 839 232 77 0 chrX 34125638 34125845 -132524451 - L1_Mur3 LINE L1 -724 5156 4934 2 845 455 230 227 99 chrX 34125976 34126241 -132524055 - L1_Mur3 LINE L1 -967 4913 4597 2 845 715 143 95 29 chrX 34126241 34126378 -132523918 + B1_Mus1 SINE Alu 3 148 0 2 845 455 230 227 99 chrX 34126378 34126416 -132523880 - L1_Mur3 LINE L1 -1284 4596 4571 2 845 353 289 15 38 chrX 34126416 34126549 -132523747 - Lx9 LINE L1 -354 7290 7161 2 845 296 339 72 62 chrX 34126790 34126806 -132523490 - MLT1A LTR MaLR -177 197 182 2 845 336 24 0 0 chrX 34126806 34126847 -132523449 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 845 296 339 72 62 chrX 34126847 34127025 -132523271 - MLT1A LTR MaLR -193 181 2 2 845 381 22 0 0 chrX 34127071 34127117 -132523179 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 845 244 235 161 23 chrX 34127860 34127947 -132522349 - MLT1A0 LTR MaLR -4 404 306 2 845 254 321 0 35 chrX 34128034 34128121 -132522175 - MLT1A0 LTR MaLR -237 128 45 2 845 1181 284 78 27 chrX 34128148 34128557 -132521739 + Lx8 LINE L1 7039 7468 -5 2 845 387 270 78 29 chrX 34128783 34128886 -132521410 - PB1D7 SINE Alu 0 120 13 2 845 690 257 28 0 chrX 34129095 34129239 -132521057 + B1F2 SINE Alu 2 149 0 2 845 1110 218 18 32 chrX 34129243 34129461 -132520835 + B3 SINE B2 2 216 0 2 845 1305 171 96 4 chrX 34129576 34129846 -132520450 - Lx9 LINE L1 -147 7497 7203 2 845 411 230 27 61 chrX 34129847 34129995 -132520301 + Lx9 LINE L1 7502 7644 0 2 845 580 252 83 8 chrX 34130002 34130134 -132520162 + B3A SINE B2 2 143 -55 2 845 297 320 0 74 chrX 34130684 34130792 -132519504 - MER5A1 DNA MER1_type -58 108 9 2 845 360 0 0 0 chrX 34130937 34130977 -132519319 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 845 344 306 129 10 chrX 34131068 34131265 -132519031 + MIR SINE MIR 1 220 -48 2 845 256 329 120 29 chrX 34131372 34131547 -132518749 - LTR16A1 LTR ERVL -8 448 258 2 845 599 304 59 31 chrX 34131956 34132211 -132518085 + MIR SINE MIR 1 262 0 2 845 1764 210 59 5 chrX 34132236 34132595 -132517701 - MTD LTR MaLR -20 399 39 2 845 324 120 0 0 chrX 34132599 34132649 -132517647 + (CAA)n Simple_repeat Simple_repeat 2 51 0 2 845 226 309 44 126 chrX 34132710 34132869 -132517427 - L2 LINE L2 -423 2996 2851 2 845 399 303 39 25 chrX 34132872 34133075 -132517221 - L1M5 LINE L1 -371 5753 5548 2 845 274 182 73 0 chrX 34133086 34133141 -132517155 - L2a LINE L2 -9 3417 3359 2 845 1040 236 14 0 chrX 34133792 34134000 -132516296 + B3 SINE B2 1 211 -5 2 845 22 0 0 0 chrX 34134005 34134027 -132516269 + AT_rich Low_complexity Low_complexity 1 22 0 2 845 385 247 35 23 chrX 34134213 34134300 -132515996 - PB1D10 SINE Alu -20 97 10 2 845 251 287 19 96 chrX 34134215 34134319 -132515977 - MT2B2 LTR ERVL -333 251 156 2 845 446 88 15 0 chrX 34134380 34134448 -132515848 + (TTTC)n Simple_repeat Simple_repeat 2 70 0 2 845 1094 118 7 0 chrX 34134681 34134825 -132515471 + B1_Mus1 SINE Alu 3 147 -1 2 845 1487 22 0 6 chrX 34134842 34135022 -132515274 + (GGGAGA)n Simple_repeat Simple_repeat 1 179 0 2 845 330 26 0 0 chrX 34135022 34135060 -132515236 + (GGAA)n Simple_repeat Simple_repeat 1 39 0 2 845 3127 98 2 10 chrX 34135150 34135553 -132514743 - MTB LTR MaLR 0 400 1 2 845 345 277 142 26 chrX 34135562 34135829 -132514467 - L1ME4a LINE L1 -207 5917 5620 2 845 180 77 0 0 chrX 34136105 34136131 -132514165 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 2 845 250 203 26 104 chrX 34136175 34136252 -132514044 - B4A SINE B4 0 292 222 2 845 354 263 50 50 chrX 34136280 34136420 -132513876 - B4A SINE B4 -152 140 1 2 845 198 97 0 0 chrX 34136463 34136473 -132513823 + (T)n Simple_repeat Simple_repeat 1 10 0 2 845 1607 68 5 0 chrX 34136473 34136665 -132513631 - B2_Mm1t SINE B2 0 193 1 2 845 198 97 0 0 chrX 34136665 34136685 -132513611 + (T)n Simple_repeat Simple_repeat 1 20 0 2 845 333 0 0 0 chrX 34139094 34139131 -132511165 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 845 227 310 40 72 chrX 34139549 34139674 -132510622 - MER5A DNA MER1_type -6 183 63 2 845 239 308 39 43 chrX 34140259 34140390 -132509906 + MIR SINE MIR 6 139 -129 2 845 208 293 64 39 chrX 34140498 34140576 -132509720 - L2a LINE L2 -24 3402 3323 2 845 996 96 21 29 chrX 34141837 34141977 -132508319 + B1_Mur4 SINE Alu 1 139 -11 2 845 207 0 0 0 chrX 34141977 34142000 -132508296 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 845 255 308 109 15 chrX 34144202 34144450 -132505846 + L2b LINE L2 2825 3091 -335 2 845 879 245 219 41 chrX 34146101 34146493 -132503803 + Lx8 LINE L1 7010 7471 -2 2 845 443 299 144 5 chrX 34146813 34147008 -132503288 - Lx8 LINE L1 -7 7466 7245 2 845 576 216 18 0 chrX 34147354 34147465 -132502831 + PB1D10 SINE Alu 2 114 -3 3 845 1757 248 120 8 chrX 34147468 34147959 -132502337 + Lx8 LINE L1 6921 7466 -7 3 845 265 83 0 0 chrX 34152475 34152511 -132497785 + U2 snRNA snRNA 1 36 -152 3 845 671 232 0 58 chrX 34152707 34152881 -132497415 + RSINE1 SINE B4 2 165 0 3 845 211 278 0 22 chrX 34152881 34152973 -132497323 + (CAAA)n Simple_repeat Simple_repeat 2 91 0 3 845 1407 95 39 0 chrX 34154063 34154242 -132496054 + B2_Mm2 SINE B2 2 187 -8 3 845 1068 211 135 41 chrX 34155091 34155358 -132494938 + B4 SINE B4 1 292 0 3 845 291 54 0 0 chrX 34155369 34155406 -132494890 + (CATA)n Simple_repeat Simple_repeat 4 40 0 3 845 180 0 0 0 chrX 34155736 34155756 -132494540 + (G)n Simple_repeat Simple_repeat 1 20 0 3 845 1478 45 44 11 chrX 34156352 34156534 -132493762 + B2_Mm1t SINE B2 1 188 -5 3 845 967 216 100 0 chrX 34156738 34156928 -132493368 - B3 SINE B2 -7 209 1 3 845 428 289 25 95 chrX 34157020 34157252 -132493044 + L1_Mur3 LINE L1 5160 5416 -884 3 845 908 228 79 0 chrX 34157252 34157441 -132492855 + B3 SINE B2 3 206 -10 3 845 428 284 20 96 chrX 34157441 34157557 -132492739 + L1_Mur3 LINE L1 5417 5524 -776 3 845 364 267 0 0 chrX 34158179 34158267 -132492029 + ID4_ SINE ID 12 99 -53 3 845 339 25 0 0 chrX 34158267 34158307 -132491989 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 845 180 176 0 0 chrX 34158612 34158646 -132491650 + T-rich Low_complexity Low_complexity 4 37 0 3 845 261 234 0 129 chrX 34159017 34159164 -132491132 - Lx8 LINE L1 -2 7471 7344 3 845 411 262 0 0 chrX 34159556 34159636 -132490660 + ID4_ SINE ID 2 81 -2 3 845 297 0 0 0 chrX 34159707 34159740 -132490556 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 845 416 267 0 108 chrX 34161407 34161537 -132488759 + PB1D10 SINE Alu 2 117 0 3 845 396 0 0 0 chrX 34162108 34162152 -132488144 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 845 215 179 94 125 chrX 34162296 34162360 -132487936 - ID SINE ID -162 62 1 3 845 262 388 0 12 chrX 34162388 34162474 -132487822 - PB1D10 SINE Alu -32 85 1 3 845 239 0 0 31 chrX 34162627 34162659 -132487637 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 3 845 909 180 7 0 chrX 34162659 34162809 -132487487 - B3 SINE B2 -16 200 50 3 845 1413 239 120 92 chrX 34164472 34164595 -132485701 + L1MC LINE L1 4259 4366 -1780 3 845 534 278 30 8 chrX 34164595 34164729 -132485567 + B1F SINE Alu 3 139 -10 3 845 1413 239 120 92 chrX 34164729 34164999 -132485297 + L1MC LINE L1 4367 4637 -1509 3 845 880 182 0 26 chrX 34164999 34165151 -132485145 + B1_Mur1 SINE Alu 2 149 0 3 845 1413 239 120 92 chrX 34165151 34165416 -132484880 + L1MC LINE L1 4638 4936 -1210 3 845 514 243 115 55 chrX 34165436 34165619 -132484677 + B3A SINE B2 2 195 -3 3 845 4959 115 56 1 chrX 34165633 34166350 -132483946 + RMER6A LTR ERVK 1 756 0 3 845 353 275 0 24 chrX 34166365 34166447 -132483849 + ID4 SINE ID 2 81 -2 3 845 357 284 12 0 chrX 34166597 34166678 -132483618 - ID4_ SINE ID 0 83 2 3 845 1052 208 29 14 chrX 34166805 34167015 -132483281 - B3 SINE B2 0 216 4 3 845 664 226 97 6 chrX 34167020 34167226 -132483070 + L1MA4 LINE L1 4103 4323 -1820 3 845 1088 181 53 14 chrX 34167230 34167437 -132482859 + B3 SINE B2 2 216 0 3 845 618 233 0 36 chrX 34167456 34167594 -132482702 - B1_Mur1 SINE Alu -7 142 10 3 845 1714 226 89 81 chrX 34167612 34168229 -132482067 + L1MA4 LINE L1 4326 4947 -1196 3 845 1661 251 128 17 chrX 34168239 34168838 -132481458 + L1MA4 LINE L1 5588 6253 -47 3 845 331 197 23 0 chrX 34169283 34169415 -132480881 + (CAGA)n Simple_repeat Simple_repeat 2 136 0 3 845 238 276 53 0 chrX 34169485 34169561 -132480735 + GA-rich Low_complexity Low_complexity 3 82 0 3 845 366 192 0 14 chrX 34170149 34170223 -132480073 + ID4 SINE ID 2 74 -9 3 845 1198 61 0 7 chrX 34170350 34170499 -132479797 - B1_Mus1 SINE Alu 0 148 1 3 845 391 258 37 47 chrX 34170511 34170652 -132479644 - L1MA10 LINE L1 -67 6267 6169 3 845 921 113 4 7 chrX 34170906 34171075 -132479221 - B2_Mm2 SINE B2 -26 167 1 3 845 329 172 31 15 chrX 34171084 34171149 -132479147 - B1_Mur3 SINE Alu -6 143 78 3 845 2367 284 55 17 chrX 34171300 34172076 -132478220 + Lx8 LINE L1 6619 7424 -49 3 845 1390 277 260 34 chrX 34172257 34172612 -132477684 - MTD-int LTR MaLR -153 945 699 3 845 4345 35 18 0 chrX 34172612 34173122 -132477174 + MURVY-LTR LTR ERV1 1 519 0 3 845 1960 244 43 60 chrX 34173122 34173850 -132476446 - MTD-int LTR MaLR -400 698 5 3 845 438 228 79 0 chrX 34173853 34173980 -132476316 - MTD LTR MaLR 0 419 283 3 845 255 79 0 0 chrX 34174115 34174153 -132476143 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 3 845 672 231 13 20 chrX 34174156 34174306 -132475990 - B1_Mur2 SINE Alu 0 149 1 3 845 220 136 23 0 chrX 34174703 34174747 -132475549 + T-rich Low_complexity Low_complexity 2 46 0 3 845 452 262 0 9 chrX 34175456 34175564 -132474732 + PB1D10 SINE Alu 3 109 -8 3 845 686 227 62 62 chrX 34175646 34175857 -132474439 + ID_B1 SINE B4 11 221 -3 3 845 186 133 0 0 chrX 34175859 34175889 -132474407 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 3 845 1071 277 111 14 chrX 34176814 34177166 -132473130 + MTD LTR MaLR 19 404 -15 3 845 474 256 38 15 chrX 34177229 34177360 -132472936 - B1F SINE Alu -15 134 1 3 845 377 192 79 88 chrX 34178128 34178242 -132472054 - B1F SINE Alu -5 144 32 3 845 272 270 122 61 chrX 34178414 34178627 -132471669 + L2 LINE L2 2805 3030 -389 3 845 247 361 18 44 chrX 34179343 34179456 -132470840 + MER20B DNA MER1_type 56 165 -618 3 845 262 345 57 79 chrX 34179513 34179793 -132470503 + B4 SINE B4 1 274 -18 3 845 240 77 0 71 chrX 34179945 34179987 -132470309 - Lx9 LINE L1 -7 7637 7599 3 845 214 258 0 0 chrX 34180001 34180067 -132470229 + T-rich Low_complexity Low_complexity 1 66 0 3 845 517 237 8 25 chrX 34180609 34180730 -132469566 + PB1D9 SINE Alu 2 120 0 3 845 476 266 117 51 chrX 34181025 34181282 -132469014 + B4 SINE B4 3 276 -16 3 845 180 0 0 0 chrX 34181740 34181760 -132468536 + (T)n Simple_repeat Simple_repeat 1 20 0 3 845 1155 88 0 0 chrX 34181760 34181908 -132468388 - B1_Mus1 SINE Alu 0 148 1 3 845 320 250 165 26 chrX 34182207 34182322 -132467974 - ID_B1 SINE B4 -10 214 84 3 845 615 27 0 0 chrX 34182322 34182395 -132467901 + (TC)n Simple_repeat Simple_repeat 2 74 0 3 845 662 246 208 17 chrX 34182751 34182987 -132467309 + Lx8 LINE L1 7192 7472 -1 3 845 1168 55 7 0 chrX 34182997 34183142 -132467154 + B1_Mus1 SINE Alu 3 148 0 3 845 216 0 0 0 chrX 34183332 34183356 -132466940 + (TC)n Simple_repeat Simple_repeat 1 24 0 3 845 1142 75 0 0 chrX 34183808 34183955 -132466341 + B1_Mm SINE Alu 1 147 0 3 845 267 103 0 0 chrX 34183957 34183996 -132466300 + (A)n Simple_repeat Simple_repeat 1 39 0 3 845 533 28 0 14 chrX 34185665 34185737 -132464559 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 845 696 12 0 0 chrX 34185737 34185817 -132464479 + (GA)n Simple_repeat Simple_repeat 2 82 0 3 845 835 78 38 15 chrX 34185820 34185951 -132464345 + B1_Mus2 SINE Alu 12 145 -2 3 845 813 248 7 112 chrX 34185992 34186269 -132464027 + B4A SINE B4 41 288 -4 3 845 946 92 23 0 chrX 34187388 34187519 -132462777 - B1_Mus2 SINE Alu -13 134 1 3 845 655 88 0 0 chrX 34188989 34189080 -132461216 - B1_Mm SINE Alu -56 91 1 3 845 385 193 0 102 chrX 34188997 34189095 -132461201 - MT2B LTR ERVL -361 240 153 3 845 1167 75 0 0 chrX 34189227 34189374 -132460922 + B1_Mus1 SINE Alu 2 148 0 3 845 275 0 0 28 chrX 34189374 34189410 -132460886 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 845 2721 47 6 180 chrX 34189541 34190013 -132460283 + RLTR10 LTR ERVK 1 390 0 3 845 6149 59 62 106 chrX 34190023 34191015 -132459281 + RLTR10-int LTR ERVK 41 988 -999 3 845 8978 19 0 0 chrX 34191094 34192089 -132458207 + RLTR10-int LTR ERVK 990 1984 -3 3 845 2721 47 6 180 chrX 34192091 34192563 -132457733 + RLTR10 LTR ERVK 1 390 0 3 845 2600 80 3 0 chrX 34192818 34193144 -132457152 + ORR1A2 LTR MaLR 1 327 0 3 845 458 229 46 28 chrX 34193454 34193562 -132456734 + RSINE1 SINE B4 6 115 -50 3 845 588 29 0 0 chrX 34193565 34193635 -132456661 + (TC)n Simple_repeat Simple_repeat 1 70 0 3 845 300 53 0 0 chrX 34193635 34193672 -132456624 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 845 288 132 0 56 chrX 34193685 34193757 -132456539 + GA-rich Low_complexity Low_complexity 2 69 0 3 845 409 288 17 0 chrX 34194245 34194363 -132455933 + MIR SINE MIR 30 149 -59 3 845 1028 175 58 5 chrX 34194381 34194588 -132455708 + URR1B DNA MER1_type 5 222 -3 3 845 486 244 0 8 chrX 34195325 34195441 -132454855 + PB1 SINE Alu 12 119 -1 3 845 28 29 0 0 chrX 34195528 34195563 -132454733 + AT_rich Low_complexity Low_complexity 1 35 0 3 845 2840 286 47 27 chrX 34195582 34196212 -132454084 + Lx8 LINE L1 6310 6943 -530 3 845 951 18 0 0 chrX 34196212 34196325 -132453971 + (TG)n Simple_repeat Simple_repeat 1 113 0 3 845 288 0 0 0 chrX 34196325 34196356 -132453940 + (GA)n Simple_repeat Simple_repeat 1 32 0 3 845 2840 286 47 27 chrX 34196356 34196674 -132453622 + Lx8 LINE L1 6944 7277 -196 3 845 192 294 0 0 chrX 34197005 34197073 -132453223 + C-rich Low_complexity Low_complexity 5 72 0 3 845 340 55 36 0 chrX 34197171 34197226 -132453070 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 845 489 34 0 0 chrX 34198776 34198835 -132451461 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 845 229 310 122 17 chrX 34199395 34199417 -132450879 + B4 SINE B4 65 98 -194 3 845 420 252 68 0 chrX 34199417 34199520 -132450776 + PB1D10 SINE Alu 1 110 -7 3 845 477 280 0 41 chrX 34199685 34199808 -132450488 - PB1D7 SINE Alu -2 118 1 3 845 378 0 0 0 chrX 34199836 34199878 -132450418 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 845 246 62 0 0 chrX 34200655 34200687 -132449609 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 4 845 759 118 0 16 chrX 34200688 34200809 -132449487 - B1_Mur4 SINE Alu -2 148 30 4 845 989 220 19 5 chrX 34200811 34201021 -132449275 - B3 SINE B2 -2 214 2 4 845 696 65 0 0 chrX 34201447 34201540 -132448756 + B1_Mus2 SINE Alu 55 147 0 4 845 1965 126 27 59 chrX 34201631 34201969 -132448327 - ORR1A4 LTR MaLR 0 329 3 4 845 473 251 53 92 chrX 34202051 34202257 -132448039 + B3A SINE B2 1 198 0 4 845 330 296 128 17 chrX 34202441 34202613 -132447683 + L1M5 LINE L1 5283 5473 -767 4 845 312 27 0 0 chrX 34202632 34202669 -132447627 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 845 25 65 0 0 chrX 34202697 34202743 -132447553 + AT_rich Low_complexity Low_complexity 1 46 0 4 845 808 190 178 32 chrX 34202743 34202928 -132447368 - B3 SINE B2 -3 213 2 4 845 321 287 11 11 chrX 34203349 34203444 -132446852 + RMER15-int LTR ERVL 10 104 -4895 4 845 1515 151 43 0 chrX 34203775 34204033 -132446263 + ORR1C1 LTR MaLR 1 269 -109 4 845 1007 305 13 3 chrX 34204033 34204342 -132445954 + RMER15-int LTR ERVL 1303 1614 -3385 4 845 274 333 29 43 chrX 34204710 34204848 -132445448 + RMER15-int LTR ERVL 1739 1874 -3125 4 845 1581 311 111 64 chrX 34205109 34205174 -132445122 + Lx8 LINE L1 6189 6251 -1222 4 845 1589 238 36 3 chrX 34205174 34205532 -132444764 + ORR1D2 LTR MaLR 1 370 0 4 845 1581 311 111 64 chrX 34205532 34206419 -132443877 + Lx8 LINE L1 6252 7186 -287 4 845 403 333 100 0 chrX 34206546 34206726 -132443570 + RMER15 LTR ERVL 362 559 -16 4 845 425 290 59 6 chrX 34206873 34207043 -132443253 - L2a LINE L2 -5 3421 3243 4 845 358 254 0 106 chrX 34207230 34207353 -132442943 - MLT1E1 LTR MaLR -386 268 159 4 845 270 239 0 27 chrX 34207716 34207789 -132442507 - Lx8 LINE L1 -10 7463 7393 4 845 1965 174 71 3 chrX 34207794 34208174 -132442122 + MTD LTR MaLR 6 411 -8 4 845 292 317 89 6 chrX 34209358 34209526 -132440770 - MER5A DNA MER1_type -3 186 5 4 845 454 225 115 18 chrX 34209598 34209711 -132440585 + B3A SINE B2 1 124 -74 4 845 288 0 0 0 chrX 34209711 34209743 -132440553 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 846 352 308 94 20 chrX 34210174 34210323 -132439973 - MLT1E1 LTR MaLR -493 160 1 4 846 871 310 149 22 chrX 34210326 34210572 -132439724 - L2a LINE L2 -998 2421 2136 4 846 676 265 0 0 chrX 34210572 34210708 -132439588 + B1_Mur1 SINE Alu 1 136 -13 4 846 871 310 149 22 chrX 34210708 34211064 -132439232 - L2a LINE L2 -1284 2135 1743 4 846 1159 105 41 0 chrX 34211718 34211890 -132438406 + B2_Mm1t SINE B2 1 179 -14 4 846 361 126 13 18 chrX 34211921 34211986 -132438310 + B2_Mm2 SINE B2 46 115 -83 4 846 28 0 0 0 chrX 34212000 34212028 -132438268 + AT_rich Low_complexity Low_complexity 1 28 0 4 846 1278 45 0 0 chrX 34212085 34212240 -132438056 + L1_Mus2 LINE L1 6411 6565 -1 4 846 291 267 13 0 chrX 34212360 34212435 -132437861 + MLT1E2 LTR MaLR 546 621 -6 4 846 278 277 0 0 chrX 34213822 34213887 -132436409 + ID4 SINE ID 2 66 -17 4 846 640 200 0 39 chrX 34214199 34214329 -132435967 + RSINE1 SINE B4 3 127 -38 4 846 881 142 0 7 chrX 34214327 34214469 -132435827 - RLTR20D LTR ERVK -427 141 1 4 846 392 229 152 0 chrX 34214469 34214587 -132435709 + L1MD LINE L1 2407 2542 -3604 4 846 363 102 17 0 chrX 34214676 34214735 -132435561 + ORR1B1 LTR MaLR 335 394 0 4 846 579 233 139 113 chrX 34214842 34214953 -132435343 - L1MA8 LINE L1 -3 6288 6186 4 846 945 248 9 0 chrX 34214953 34215167 -132435129 + B3 SINE B2 1 216 0 4 846 579 233 139 113 chrX 34215167 34215399 -132434897 - L1MA8 LINE L1 -106 6185 5936 4 846 1259 130 20 15 chrX 34215399 34215594 -132434702 - L1VL2 LINE L1 -6039 296 101 4 846 573 232 0 74 chrX 34215622 34215771 -132434525 - B3A SINE B2 -1 197 60 4 846 325 277 0 60 chrX 34216067 34216167 -132434129 - PB1D7 SINE Alu -21 99 6 4 846 1214 61 0 0 chrX 34216205 34216352 -132433944 - B1_Mus2 SINE Alu 0 147 1 4 846 551 258 152 0 chrX 34216400 34216551 -132433745 - B3A SINE B2 -22 176 3 4 846 378 317 78 5 chrX 34216614 34216833 -132433463 - L1MDa LINE L1 -5506 1127 893 4 846 1127 320 142 10 chrX 34216917 34217410 -132432886 - L1MDa LINE L1 -6026 607 50 4 846 598 298 7 0 chrX 34217458 34217599 -132432697 - B3A SINE B2 -49 149 8 4 846 21 0 0 0 chrX 34217615 34217636 -132432660 + AT_rich Low_complexity Low_complexity 1 21 0 4 846 398 259 97 69 chrX 34217640 34217785 -132432511 + MLT1A0 LTR MaLR 4 152 -222 4 846 229 301 103 41 chrX 34217962 34218059 -132432237 + MLT1A0 LTR MaLR 305 407 -1 4 846 329 278 0 0 chrX 34218086 34218158 -132432138 + ID4 SINE ID 12 83 0 4 846 253 351 100 33 chrX 34218288 34218468 -132431828 - L3 LINE CR1 -910 3579 3388 4 846 2686 87 120 2 chrX 34218889 34219314 -132430982 + IAPLTR2_Mm LTR ERVK 1 475 0 4 846 266 217 16 16 chrX 34219372 34219433 -132430863 + MER5A DNA MER1_type 26 86 -103 4 846 1074 93 0 32 chrX 34219664 34219819 -132430477 + B1_Mur4 SINE Alu 1 150 0 4 846 1528 57 0 44 chrX 34219981 34220184 -132430112 + B2_Mm2 SINE B2 2 195 0 4 846 307 262 0 12 chrX 34220238 34220319 -132429977 + CT-rich Low_complexity Low_complexity 1 80 0 4 846 1118 96 0 0 chrX 34220779 34220925 -132429371 + B1_Mus2 SINE Alu 2 147 0 4 846 267 219 131 15 chrX 34221014 34221160 -132429136 + L1MEg LINE L1 1290 1469 -4539 4 846 1388 92 0 39 chrX 34221247 34221450 -132428846 + B2_Mm2 SINE B2 1 195 0 4 846 2016 212 19 21 chrX 34221501 34221921 -132428375 + MTD LTR MaLR 1 419 0 4 846 321 236 199 0 chrX 34222589 34222750 -132427546 + Lx8 LINE L1 7253 7445 -28 4 846 180 0 0 0 chrX 34223084 34223104 -132427192 + (CAAAT)n Simple_repeat Simple_repeat 2 21 0 4 846 1423 260 11 48 chrX 34223255 34223321 -132426975 + RMER1B Other Other 7 72 -994 4 846 3086 58 8 13 chrX 34223321 34223719 -132426577 - MTA_Mm LTR MaLR 0 396 1 4 846 4136 33 0 102 chrX 34223728 34224306 -132425990 + MURVY-LTR LTR ERV1 1 519 0 4 846 1423 268 12 37 chrX 34224306 34224890 -132425406 + RMER1B Other Other 43 450 -616 4 846 3097 160 55 161 chrX 34224891 34225609 -132424687 + RMER1A Other Other 81 714 -316 4 846 1940 111 43 22 chrX 34225609 34225931 -132424365 - ORR1A4 LTR MaLR 0 329 1 4 846 3097 160 55 161 chrX 34225931 34226099 -132424197 + RMER1A Other Other 715 873 -157 4 846 12315 69 18 68 chrX 34226099 34228002 -132422294 + RLTR22_Mus LTR ERVK 1 1808 0 4 846 469 153 173 15 chrX 34228004 34228137 -132422159 + RMER1A Other Other 875 1028 -2 4 846 1365 87 38 0 chrX 34228209 34228394 -132421902 + B2_Mm2 SINE B2 3 194 -1 4 846 774 234 0 0 chrX 34228732 34228877 -132421419 + RSINE1 SINE B4 3 147 -18 4 846 323 282 34 117 chrX 34229429 34229634 -132420662 - L2a LINE L2 0 3426 3239 4 846 610 248 20 54 chrX 34230206 34230355 -132419941 - B1F SINE Alu 0 149 6 4 846 557 298 75 6 chrX 34231080 34231358 -132418938 - Lx9 LINE L1 -171 7473 7163 4 846 502 281 32 90 chrX 34231462 34231794 -132418502 + ORR1E LTR MaLR 39 365 -14 4 846 413 325 17 9 chrX 34231852 34231967 -132418329 + PB1D10 SINE Alu 1 116 -1 4 846 1319 256 50 11 chrX 34232381 34232740 -132417556 - MTE2b LTR MaLR -4 375 3 4 846 2354 225 86 26 chrX 34232778 34232907 -132417389 + RCHARR1 DNA MER1_type 3 131 -843 4 846 5442 85 20 64 chrX 34232907 34233747 -132416549 + RLTR13B4 LTR ERVK 1 803 0 4 846 2354 225 86 26 chrX 34233747 34234237 -132416059 + RCHARR1 DNA MER1_type 132 659 -315 4 846 758 268 30 0 chrX 34234247 34234411 -132415885 + ID_B1 SINE B4 2 170 -54 4 846 246 333 39 65 chrX 34234516 34234547 -132415749 + Tigger6a DNA MER2_type 496 582 -501 4 846 337 297 39 19 chrX 34234547 34234650 -132415646 - RMER15 LTR ERVL -102 473 369 4 846 246 333 39 65 chrX 34234650 34234670 -132415626 + Tigger6a DNA MER2_type 583 645 -438 4 846 282 299 27 74 chrX 34234692 34234840 -132415456 - RMER15 LTR ERVL -390 185 45 4 846 1030 244 104 35 chrX 34234928 34235187 -132415109 - B4 SINE B4 -14 278 2 4 846 371 290 87 68 chrX 34235318 34235631 -132414665 + ORR1E LTR MaLR 11 327 -57 4 846 464 206 31 10 chrX 34235656 34235754 -132414542 - ID_B1 SINE B4 -2 222 123 4 846 254 374 59 20 chrX 34235782 34235883 -132414413 + ID_B1 SINE B4 82 186 -38 4 846 7336 71 8 6 chrX 34235883 34237498 -132412798 + L1_Mus1 LINE L1 4965 6567 0 4 846 1164 74 0 0 chrX 34237511 34237659 -132412637 + B1_Mus1 SINE Alu 1 148 0 4 846 287 252 104 86 chrX 34238832 34239053 -132411243 - RLTR42-int LTR ERVK -4123 1399 1175 4 846 483 271 166 63 chrX 34239122 34239472 -132410824 + L1MA4 LINE L1 5551 5936 -364 4 846 301 297 92 21 chrX 34239524 34239665 -132410631 + HAL1-3A_ME LINE L1 2288 2438 -420 4 846 622 208 159 22 chrX 34239789 34239971 -132410325 + B4 SINE B4 5 211 -81 4 846 246 105 0 0 chrX 34239971 34240009 -132410287 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 846 384 308 15 8 chrX 34240496 34240630 -132409666 - RMER15 LTR ERVL -37 538 404 4 846 258 32 0 0 chrX 34240855 34240886 -132409410 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 846 495 0 0 0 chrX 34240886 34240940 -132409356 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 846 963 0 0 0 chrX 34240941 34241048 -132409248 + (GAA)n Simple_repeat Simple_repeat 2 108 0 4 846 365 269 11 0 chrX 34241054 34241147 -132409149 - Lx8 LINE L1 -348 7125 7032 4 846 1110 117 18 0 chrX 34241464 34241635 -132408661 - B2_Mm2 SINE B2 -20 175 2 4 846 230 372 12 94 chrX 34241558 34241718 -132408578 + ID_B1 SINE B4 1 147 -77 4 846 270 0 0 0 chrX 34242299 34242329 -132407967 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 846 843 279 53 53 chrX 34242346 34242482 -132407814 - L1MC4 LINE L1 -497 7545 7419 4 846 1290 78 50 0 chrX 34242482 34242662 -132407634 + B2_Mm2 SINE B2 1 189 -6 4 846 843 279 53 53 chrX 34242662 34242976 -132407320 - L1MC4 LINE L1 -624 7418 7095 4 846 501 331 12 24 chrX 34242981 34243148 -132407148 + B3A SINE B2 2 166 -32 4 846 480 229 41 12 chrX 34243286 34243457 -132406839 + L1MA6 LINE L1 5758 5934 -245 4 846 270 243 27 0 chrX 34243749 34243823 -132406473 + Charlie1a DNA MER1_type 80 155 -1300 4 846 262 244 0 0 chrX 34243822 34243864 -132406432 + ID_B1 SINE B4 79 120 -104 4 846 387 262 0 0 chrX 34243864 34243944 -132406352 + RSINE1 SINE B4 2 81 -84 5 846 243 327 56 37 chrX 34244122 34244230 -132406066 + Charlie1a DNA MER1_type 306 415 -1040 4 846 857 233 24 19 chrX 34244292 34244502 -132405794 - B3 SINE B2 -5 211 1 5 846 873 143 7 7 chrX 34244580 34244721 -132405575 - B1_Mur3 SINE Alu -8 141 1 5 846 327 304 78 0 chrX 34244813 34244928 -132405368 + Arthur1B DNA Tip100 630 753 -472 5 846 33564 62 21 6 chrX 34244928 34250810 -132399486 - L1Md_F2 LINE L1 -6 6576 630 5 846 21 0 0 0 chrX 34250815 34250836 -132399460 + AT_rich Low_complexity Low_complexity 1 21 0 5 846 395 263 9 0 chrX 34250836 34250950 -132399346 - L1MA6 LINE L1 -420 5880 5766 5 846 342 199 229 55 chrX 34250948 34251241 -132399055 + L1M2 LINE L1 5147 5488 -695 5 846 235 222 118 53 chrX 34251870 34251946 -132398350 + ID4_ SINE ID 1 81 -2 5 846 245 204 26 120 chrX 34251966 34252083 -132398213 + L1MB3 LINE L1 6071 6176 -7 5 846 240 275 78 108 chrX 34252313 34252428 -132397868 - L2a LINE L2 0 3426 3323 5 846 777 242 15 64 chrX 34252428 34252631 -132397665 - B3A SINE B2 -4 194 2 5 846 240 275 78 108 chrX 34252631 34252747 -132397549 - L2a LINE L2 -104 3322 3202 5 846 354 262 27 45 chrX 34252907 34253019 -132397277 + PB1D10 SINE Alu 1 110 -7 5 846 413 330 23 11 chrX 34253154 34253329 -132396967 + MER2 DNA MER2_type 111 287 -58 5 846 726 270 83 68 chrX 34253400 34253678 -132396618 - L2a LINE L2 -528 2891 2610 5 846 321 244 0 89 chrX 34253778 34253868 -132396428 + BC1_Mm scRNA scRNA 2 83 -69 5 846 396 0 0 0 chrX 34253915 34253959 -132396337 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 5 846 361 263 110 73 chrX 34254028 34254070 -132396226 - Arthur1 DNA Tip100 -102 3845 3808 5 846 432 0 0 0 chrX 34254070 34254118 -132396178 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 5 846 361 263 110 73 chrX 34254118 34254131 -132396165 - Arthur1 DNA Tip100 -140 3807 3797 5 846 637 251 39 83 chrX 34254131 34254301 -132395995 + B3A SINE B2 2 174 -24 5 846 546 57 0 0 chrX 34254301 34254371 -132395925 + (GA)n Simple_repeat Simple_repeat 2 71 0 5 846 637 251 39 83 chrX 34254371 34254404 -132395892 + B3A SINE B2 175 196 -2 5 846 361 263 110 73 chrX 34254404 34254593 -132395703 - Arthur1 DNA Tip100 -151 3796 3591 5 846 1262 301 104 13 chrX 34254635 34255184 -132395112 - Arthur1 DNA Tip100 -2643 1304 706 5 846 1085 275 61 55 chrX 34255196 34255688 -132394608 + L1MB1 LINE L1 5579 6073 -95 5 846 225 132 0 0 chrX 34255690 34255728 -132394568 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 846 835 332 126 31 chrX 34255820 34256208 -132394088 - Arthur1 DNA Tip100 -3308 639 215 5 846 552 248 78 0 chrX 34256309 34256438 -132393858 - ID_B1 SINE B4 -4 220 82 5 846 287 284 225 16 chrX 34256444 34256573 -132393723 - Arthur1 DNA Tip100 -3785 162 7 5 846 282 299 0 29 chrX 34256607 34256676 -132393620 + ID4 SINE ID 3 69 -14 5 846 280 359 0 11 chrX 34256687 34256780 -132393516 - L2a LINE L2 -830 2589 2498 5 846 2659 234 35 51 chrX 34256820 34257056 -132393240 + Lx9 LINE L1 6687 6922 -722 5 846 1319 29 92 6 chrX 34257056 34257229 -132393067 - B2_Mm2 SINE B2 -7 188 1 5 846 2659 234 35 51 chrX 34257229 34257790 -132392506 + Lx9 LINE L1 6923 7471 -173 5 846 898 157 0 36 chrX 34257931 34258096 -132392200 - B2_Mm2 SINE B2 -9 186 28 5 846 1263 95 15 69 chrX 34258093 34258257 -132392039 - B2_Mm2 SINE B2 -1 194 41 5 846 2988 50 0 13 chrX 34258257 34258644 -132391652 - L1Md_F2 LINE L1 0 6582 6201 5 846 1263 95 15 69 chrX 34258644 34258682 -132391614 - B2_Mm2 SINE B2 -155 40 3 5 846 220 167 0 67 chrX 34258684 34258729 -132391567 - B3 SINE B2 -174 42 1 5 846 693 107 170 0 chrX 34258787 34258899 -132391397 + B1_Mus1 SINE Alu 5 135 -13 5 846 246 32 0 0 chrX 34258901 34258932 -132391364 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 846 579 232 105 76 chrX 34258944 34259154 -132391142 + B3 SINE B2 1 216 0 5 846 257 347 66 46 chrX 34259169 34259320 -132390976 - L2a LINE L2 -979 2440 2287 5 846 628 316 30 50 chrX 34259394 34259594 -132390702 + B4A SINE B4 1 196 -96 5 846 269 290 156 29 chrX 34259666 34259904 -132390392 - L2a LINE L2 -1135 2284 2017 5 846 899 148 32 64 chrX 34260202 34260436 -132389860 + B2_Mm1a SINE B2 1 215 -1 5 846 329 248 158 60 chrX 34260515 34260730 -132389566 - L1M5 LINE L1 -537 5587 5352 5 846 32 0 0 0 chrX 34261921 34261953 -132388343 + AT_rich Low_complexity Low_complexity 1 32 0 5 846 484 16 16 0 chrX 34262064 34262126 -132388170 - B1_Mm SINE Alu 0 147 85 5 846 1090 37 0 0 chrX 34262149 34262283 -132388013 + L1Md_F2 LINE L1 5453 5586 -297 5 846 8355 37 1 1 chrX 34262284 34263279 -132387017 + L1Md_F2 LINE L1 5588 6582 0 5 846 24 0 0 0 chrX 34263449 34263473 -132386823 + AT_rich Low_complexity Low_complexity 1 24 0 5 846 516 250 10 10 chrX 34263518 34263619 -132386677 + RSINE1 SINE B4 47 147 -18 5 846 180 0 0 0 chrX 34263621 34263641 -132386655 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 846 824 0 10 0 chrX 34263641 34263736 -132386560 + (GA)n Simple_repeat Simple_repeat 2 98 0 5 846 419 315 46 66 chrX 34264677 34264745 -132385551 + MER58B DNA MER1_type 17 87 -254 5 846 1461 195 156 141 chrX 34264745 34265270 -132385026 - MT2A LTR ERVL 0 533 1 5 846 419 315 46 66 chrX 34265270 34265398 -132384898 + MER58B DNA MER1_type 88 209 -132 5 846 707 199 32 6 chrX 34265398 34265555 -132384741 + Lx7 LINE L1 7095 7255 -441 5 846 261 0 0 0 chrX 34265570 34265599 -132384697 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 5 846 5983 75 17 7 chrX 34265614 34266489 -132383807 - Lx3_Mus LINE L1 -47 6962 6079 5 846 675 277 21 0 chrX 34266489 34266630 -132383666 - RSINE1 SINE B4 -18 147 4 5 846 347 250 52 83 chrX 34266812 34266908 -132383388 - PB1D10 SINE Alu -24 93 1 5 846 261 0 0 0 chrX 34267099 34267128 -132383168 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 5 846 505 224 7 10 chrX 34267188 34267304 -132382992 - PB1D10 SINE Alu -34 114 1 5 846 231 283 47 110 chrX 34267304 34267355 -132382941 - B4A SINE B4 -201 91 49 5 846 424 158 117 56 chrX 34267490 34267619 -132382677 - RMER1C Other Other -14 1328 1215 5 846 364 321 81 40 chrX 34267640 34267887 -132382409 - L1ME3B LINE L1 -356 5884 5628 5 846 444 288 95 8 chrX 34267893 34268019 -132382277 - ID_B1 SINE B4 0 224 88 5 846 405 333 77 20 chrX 34268041 34268390 -132381906 - L1ME3B LINE L1 -615 5625 5257 5 846 561 349 121 14 chrX 34268434 34268789 -132381507 - L2a LINE L2 -15 3411 3019 5 846 301 319 95 18 chrX 34268883 34269052 -132381244 - L1ME3B LINE L1 -922 5224 5043 5 846 769 264 0 6 chrX 34269116 34269280 -132381016 + RSINE1 SINE B4 2 164 -1 5 846 419 304 201 14 chrX 34269322 34269606 -132380690 - L1ME3B LINE L1 -1145 5001 4665 5 846 903 290 60 54 chrX 34269740 34270090 -132380206 + ORR1E LTR MaLR 3 354 -5 5 846 4362 175 33 25 chrX 34270404 34271229 -132379067 + Lx5 LINE L1 6205 7035 -15 5 846 1173 61 0 13 chrX 34271230 34271379 -132378917 + B1_Mus2 SINE Alu 1 147 0 5 846 360 248 75 30 chrX 34271609 34271742 -132378554 + L1ME4a LINE L1 5984 6122 -2 5 846 794 271 0 68 chrX 34271866 34272056 -132378240 + B3A SINE B2 1 177 -21 5 846 324 0 0 0 chrX 34272058 34272094 -132378202 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 846 463 131 103 0 chrX 34272129 34272236 -132378060 - Lx9 LINE L1 -2 7642 7525 5 846 14901 33 1 10 chrX 34272313 34274625 -132375671 - L1Md_F2 LINE L1 -4 6578 4279 5 846 2275 41 0 0 chrX 34274625 34274895 -132375401 - L1Md_T LINE L1 -3 6579 6310 5 846 14901 27 0 14 chrX 34274895 34275162 -132375134 - L1Md_F2 LINE L1 -1605 4278 4025 5 846 12389 34 0 0 chrX 34275161 34276739 -132373557 + L1Md_F2 LINE L1 2448 4025 -1858 5 846 346 278 87 0 chrX 34276779 34276905 -132373391 - L1ME3B LINE L1 -2385 3761 3625 5 846 222 37 0 0 chrX 34276908 34276935 -132373361 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 5 846 1072 106 0 0 chrX 34276937 34277078 -132373218 - B1_Mus2 SINE Alu -6 141 1 5 846 599 222 77 0 chrX 34277260 34277377 -132372919 - RSINE1 SINE B4 -37 128 3 5 846 1182 174 80 17 chrX 34277394 34277633 -132372663 - ORR1D1 LTR MaLR -119 255 2 5 846 415 125 0 0 chrX 34277723 34277787 -132372509 + MTE2b LTR MaLR 3 66 -313 5 846 252 0 0 0 chrX 34277787 34277815 -132372481 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 5 846 1017 31 0 0 chrX 34277817 34277945 -132372351 - B1_Mus2 SINE Alu -6 141 14 5 846 32 26 0 0 chrX 34277945 34277984 -132372312 + AT_rich Low_complexity Low_complexity 1 39 0 5 846 186 191 0 0 chrX 34278134 34278181 -132372115 + GA-rich Low_complexity Low_complexity 2 48 0 5 846 192 308 0 0 chrX 34278257 34278309 -132371987 - L2b LINE L2 -217 3158 3107 5 846 29 60 0 0 chrX 34278416 34278466 -132371830 + AT_rich Low_complexity Low_complexity 1 50 0 5 846 565 254 0 8 chrX 34278509 34278628 -132371668 - RSINE1 SINE B4 -45 120 3 5 846 408 300 118 81 chrX 34278649 34278972 -132371324 - MTE2a LTR MaLR -44 335 1 5 846 252 276 0 26 chrX 34278983 34279061 -132371235 + MER20B DNA MER1_type 353 428 -355 5 846 210 250 0 19 chrX 34279343 34279396 -132370900 + GA-rich Low_complexity Low_complexity 4 55 0 5 846 273 29 0 0 chrX 34279506 34279540 -132370756 + (TATG)n Simple_repeat Simple_repeat 4 37 0 5 846 1105 100 54 32 chrX 34279694 34279855 -132370441 + B2_Mm2 SINE B2 5 162 -33 5 846 234 0 0 0 chrX 34279855 34279881 -132370415 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 5 846 990 111 123 0 chrX 34279882 34280044 -132370252 - B2_Mm1t SINE B2 -10 183 2 5 846 1105 100 54 32 chrX 34280044 34280066 -132370230 + B2_Mm2 SINE B2 163 192 -3 5 846 263 246 0 0 chrX 34280519 34280576 -132369720 + ID4_ SINE ID 17 73 -10 5 846 255 31 0 0 chrX 34280852 34280884 -132369412 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 5 846 285 245 0 0 chrX 34280958 34281011 -132369285 + ID4 SINE ID 2 54 -29 5 846 291 0 0 0 chrX 34281244 34281279 -132369017 + U2 snRNA snRNA 1 35 -153 5 846 340 141 15 15 chrX 34281693 34281758 -132368538 - L1MA5 LINE L1 -131 6169 6105 5 846 367 172 0 0 chrX 34281759 34281823 -132368473 + L1MA5 LINE L1 6175 6238 -62 5 846 239 347 0 27 chrX 34282155 34282229 -132368067 - B4A SINE B4 -2 290 219 5 846 320 261 427 40 chrX 34282309 34282487 -132367809 - B4A SINE B4 -39 253 7 5 846 270 232 0 0 chrX 34282535 34282591 -132367705 + L1MA5 LINE L1 6232 6287 -13 5 846 228 314 159 25 chrX 34283094 34283251 -132367045 - MIR SINE MIR -56 206 29 5 846 245 51 0 25 chrX 34284399 34284439 -132365857 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 846 1153 44 0 0 chrX 34284440 34284576 -132365720 - B1_Mus2 SINE Alu -10 137 2 5 846 1122 29 0 29 chrX 34285204 34285344 -132364952 - B1_Mus2 SINE Alu -10 137 2 5 846 306 0 0 0 chrX 34285560 34285594 -132364702 + (T)n Simple_repeat Simple_repeat 1 34 0 5 846 1098 79 0 0 chrX 34285605 34285744 -132364552 - B1_Mus2 SINE Alu -7 140 2 5 846 1356 51 28 0 chrX 34285926 34286102 -132364194 - B2_Mm2 SINE B2 -14 181 1 6 846 576 124 76 0 chrX 34286402 34286507 -132363789 + PB1D9 SINE Alu 8 120 0 6 846 198 0 0 0 chrX 34286507 34286529 -132363767 + (GAAA)n Simple_repeat Simple_repeat 2 23 0 6 846 189 292 85 42 chrX 34286685 34286803 -132363493 - L2b LINE L2 -215 3160 3038 6 846 1203 148 39 24 chrX 34287943 34288150 -132362146 - B3 SINE B2 -6 210 1 6 846 385 264 47 0 chrX 34289299 34289405 -132360891 - B1F SINE Alu -8 141 31 6 846 392 241 0 0 chrX 34289481 34289564 -132360732 - ID4 SINE ID 0 83 1 6 846 272 260 0 27 chrX 34289593 34289668 -132360628 - PB1 SINE Alu -34 93 21 6 846 311 323 114 14 chrX 34289926 34290012 -132360284 - L1M5 LINE L1 -412 5828 5735 6 846 1307 86 6 6 chrX 34290012 34290028 -132360268 - B2_Mm1t SINE B2 -17 176 161 6 846 342 0 0 0 chrX 34290028 34290066 -132360230 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 6 846 1307 86 6 6 chrX 34290066 34290225 -132360071 - B2_Mm1t SINE B2 -33 160 1 6 846 311 323 114 14 chrX 34290225 34290358 -132359938 - L1M5 LINE L1 -506 5734 5587 6 846 236 228 45 112 chrX 34290518 34290696 -132359600 - MER57D LTR ERV1 -3 408 243 6 846 1139 69 14 0 chrX 34291294 34291439 -132358857 + B1_Mus1 SINE Alu 2 148 0 6 846 1611 209 42 48 chrX 34291462 34291554 -132358742 + ORR1B1 LTR MaLR 20 96 -298 6 846 1388 76 43 0 chrX 34291554 34291738 -132358558 + B2_Mm2 SINE B2 2 193 -2 6 846 1611 209 42 48 chrX 34291738 34292022 -132358274 + ORR1B1 LTR MaLR 97 394 0 6 846 1626 42 16 0 chrX 34292509 34292701 -132357595 + B2_Mm2 SINE B2 1 195 0 6 846 603 270 0 20 chrX 34293113 34293128 -132357168 - B1F2 SINE Alu 0 149 137 6 846 198 0 0 0 chrX 34293128 34293150 -132357146 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 6 846 603 270 0 20 chrX 34293150 34293285 -132357011 - B1F2 SINE Alu -13 136 2 6 846 265 248 24 110 chrX 34293476 34293603 -132356693 - RMER1C Other Other 0 1342 1227 6 846 636 252 76 9 chrX 34293503 34293727 -132356569 - Lx8 LINE L1 -2 7471 7233 6 846 22 70 0 0 chrX 34293728 34293771 -132356525 + AT_rich Low_complexity Low_complexity 1 43 0 6 846 474 253 204 13 chrX 34293778 34293930 -132356366 - B3A SINE B2 -16 182 2 6 846 1356 62 17 0 chrX 34293943 34294119 -132356177 - B2_Mm1t SINE B2 -14 179 1 6 846 964 192 18 94 chrX 34294124 34294177 -132356119 - L1MA6 LINE L1 0 6300 6253 6 846 1367 73 45 0 chrX 34294177 34294356 -132355940 - B2_Mm2 SINE B2 -8 187 1 6 846 964 192 18 94 chrX 34294356 34294578 -132355718 - L1MA6 LINE L1 -48 6252 6046 6 846 643 223 36 0 chrX 34294591 34294730 -132355566 - B1F1 SINE Alu 0 149 6 6 846 30 0 0 0 chrX 34294757 34294787 -132355509 + AT_rich Low_complexity Low_complexity 1 30 0 6 846 227 79 26 0 chrX 34294817 34294855 -132355441 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 846 401 255 0 70 chrX 34294857 34294971 -132355325 - B1_Mus2 SINE Alu 0 147 42 6 846 197 145 0 61 chrX 34295001 34295067 -132355229 + (TCTCTG)n Simple_repeat Simple_repeat 4 65 0 6 846 391 284 18 44 chrX 34295535 34295649 -132354647 + PB1D10 SINE Alu 1 111 -6 6 846 285 259 115 44 chrX 34295664 34295777 -132354519 + B1F SINE Alu 21 141 -8 6 846 604 222 44 15 chrX 34295923 34296060 -132354236 - B1F SINE Alu -8 141 1 6 846 216 97 0 0 chrX 34296168 34296199 -132354097 + (T)n Simple_repeat Simple_repeat 1 31 0 6 846 797 289 9 19 chrX 34296246 34296461 -132353835 - B3 SINE B2 -2 214 2 6 846 514 234 226 6 chrX 34296701 34296731 -132353565 - B3A SINE B2 0 198 164 6 846 414 0 0 0 chrX 34296731 34296777 -132353519 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 846 514 234 226 6 chrX 34296777 34296905 -132353391 - B3A SINE B2 -35 163 5 6 846 39 0 0 20 chrX 34296990 34297007 -132353289 + AT_rich Low_complexity Low_complexity 1 17 0 6 846 1243 27 7 0 chrX 34297007 34297153 -132353143 + B1_Mus2 SINE Alu 1 147 0 6 846 39 0 0 20 chrX 34297153 34297185 -132353111 + AT_rich Low_complexity Low_complexity 1 32 0 6 846 388 266 84 0 chrX 34297208 34297362 -132352934 - L1ME2z LINE L1 -107 6337 6171 6 846 483 270 0 75 chrX 34297365 34297525 -132352771 - B1F2 SINE Alu -1 148 1 6 846 230 310 0 40 chrX 34299517 34299591 -132350705 - ID4_ SINE ID -10 73 3 6 846 364 275 42 28 chrX 34299601 34299743 -132350553 - B1F SINE Alu -5 144 1 6 846 204 67 0 0 chrX 34299785 34299815 -132350481 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 6 846 270 218 0 42 chrX 34299837 34299905 -132350391 - B2_Mm2 SINE B2 -52 141 81 6 846 853 130 14 7 chrX 34299923 34300062 -132350234 - B1_Mus2 SINE Alu -1 146 7 6 846 667 139 0 9 chrX 34300082 34300191 -132350105 + B1_Mur4 SINE Alu 43 150 0 6 846 189 0 0 0 chrX 34300193 34300214 -132350082 + (GA)n Simple_repeat Simple_repeat 2 22 0 6 846 243 0 0 0 chrX 34300220 34300247 -132350049 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 846 285 301 72 47 chrX 34300668 34300812 -132349484 + PB1D10 SINE Alu 2 148 -1 6 846 645 198 103 0 chrX 34301951 34302077 -132348219 + B1_Mur1 SINE Alu 2 140 -9 6 846 219 329 0 13 chrX 34302435 34302512 -132347784 + AmnSINE1 SINE SINE 11 86 -489 6 846 423 68 0 0 chrX 34303197 34303256 -132347040 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 846 523 254 21 71 chrX 34303256 34303396 -132346900 - RSINE1 SINE B4 -25 140 8 6 846 236 380 29 29 chrX 34304860 34304963 -132345333 + B4A SINE B4 21 123 -169 6 846 27 29 0 0 chrX 34305173 34305207 -132345089 + AT_rich Low_complexity Low_complexity 1 34 0 6 846 1336 101 11 0 chrX 34305400 34305589 -132344707 - B2_Mm1t SINE B2 -1 192 2 6 846 1251 65 64 6 chrX 34305600 34305771 -132344525 - B2_Mm2 SINE B2 -14 181 1 6 846 191 344 103 37 chrX 34305803 34305939 -132344357 + L2c LINE L2 3241 3385 -2 6 846 480 322 20 0 chrX 34306230 34306376 -132343920 + B1F1 SINE Alu 1 149 0 6 846 427 267 7 56 chrX 34306686 34306736 -132343560 - MIR SINE MIR -66 196 148 6 846 1580 48 5 0 chrX 34306736 34306924 -132343372 - B2_Mm1a SINE B2 -3 190 2 6 846 427 269 39 47 chrX 34306924 34307053 -132343243 - MIR SINE MIR -122 154 17 6 846 485 272 56 0 chrX 34307229 34307354 -132342942 - MLT1A0 LTR MaLR -37 328 197 6 846 669 100 10 0 chrX 34307372 34307472 -132342824 - B1_Mus2 SINE Alu 0 147 47 6 846 725 255 57 9 chrX 34307463 34307673 -132342623 - MLT1A0 LTR MaLR -145 220 1 6 846 312 250 60 38 chrX 34309288 34309410 -132340886 + B1F SINE Alu 14 139 -10 6 846 351 141 0 0 chrX 34309432 34309496 -132340800 + (TG)n Simple_repeat Simple_repeat 1 64 0 6 846 228 100 0 0 chrX 34309495 34309535 -132340761 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 846 313 309 49 0 chrX 34309544 34309667 -132340629 - RSINE1 SINE B4 -34 131 3 6 846 312 306 0 0 chrX 34309690 34309762 -132340534 + ID4_ SINE ID 2 73 -10 6 846 323 301 98 31 chrX 34310423 34310677 -132339619 - L1MC4a LINE L1 -1981 5901 5631 6 846 816 277 11 0 chrX 34310825 34311009 -132339287 + ID_B1 SINE B4 10 195 -29 6 846 468 0 0 0 chrX 34311009 34311061 -132339235 + (TA)n Simple_repeat Simple_repeat 1 52 0 6 846 351 314 78 28 chrX 34311521 34311662 -132338634 - MIR3 SINE MIR -25 183 36 6 846 551 277 44 0 chrX 34311958 34312117 -132338179 - MIR SINE MIR -13 249 84 6 846 253 224 0 20 chrX 34312272 34312322 -132337974 + tRNA-Ala-GCY_ tRNA tRNA 20 68 -7 6 846 248 283 0 0 chrX 34312496 34312549 -132337747 + polypyrimidine Low_complexity Low_complexity 6 58 0 6 846 524 249 234 9 chrX 34312595 34312822 -132337474 - B4 SINE B4 -14 278 1 6 846 652 229 94 11 chrX 34312828 34313009 -132337287 - ID_B1 SINE B4 -1 223 28 6 846 382 281 24 32 chrX 34313540 34313665 -132336631 - L1ME1 LINE L1 -50 6129 6006 6 846 882 189 5 140 chrX 34313837 34314059 -132336237 - B3A SINE B2 -5 193 2 6 846 25 31 0 0 chrX 34314077 34314109 -132336187 + AT_rich Low_complexity Low_complexity 1 32 0 6 846 921 149 140 60 chrX 34314822 34315022 -132335274 + B3 SINE B2 1 216 0 6 846 495 198 10 19 chrX 34315205 34315308 -132334988 + PB1D10 SINE Alu 10 111 -6 6 846 1405 75 16 11 chrX 34315943 34316132 -132334164 + B2_Mm2 SINE B2 5 194 -1 6 846 1180 61 0 20 chrX 34316133 34316284 -132334012 + B1_Mus1 SINE Alu 1 148 0 6 846 207 88 0 0 chrX 34316287 34316321 -132333975 + (A)n Simple_repeat Simple_repeat 1 34 0 6 846 28 71 0 0 chrX 34316693 34316749 -132333547 + AT_rich Low_complexity Low_complexity 1 56 0 6 846 537 310 54 0 chrX 34316761 34316945 -132333351 + B3A SINE B2 3 196 -2 6 846 1242 38 0 0 chrX 34317422 34317582 -132332714 + B2_Mm1a SINE B2 1 160 -33 6 846 195 42 0 0 chrX 34317582 34317606 -132332690 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 6 846 231 36 0 0 chrX 34317610 34317638 -132332658 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 6 846 277 299 36 45 chrX 34317916 34318028 -132332268 - PB1D10 SINE Alu 0 117 7 6 846 403 158 208 10 chrX 34318139 34318235 -132332061 - B1_Mus1 SINE Alu -32 116 2 6 846 407 286 75 8 chrX 34318610 34318744 -132331552 + B1F1 SINE Alu 1 143 -6 6 846 702 281 66 0 chrX 34318881 34319077 -132331219 + B3 SINE B2 1 209 -7 6 846 771 40 0 0 chrX 34319247 34319348 -132330948 - B1_Mus2 SINE Alu -8 139 39 6 846 277 108 73 98 chrX 34319282 34319364 -132330932 - RLTR25B LTR ERVK -519 509 430 6 846 1040 159 0 32 chrX 34319367 34319679 -132330617 + (TCTCTG)n Simple_repeat Simple_repeat 1 301 0 6 846 358 68 0 33 chrX 34319687 34319748 -132330548 - B1_Mus2 SINE Alu -88 59 1 6 846 490 268 94 68 chrX 34320047 34320239 -132330057 - B3A SINE B2 -1 197 1 6 846 1353 75 17 6 chrX 34320719 34320893 -132329403 - B2_Mm2 SINE B2 -18 177 2 7 846 237 191 221 0 chrX 34320927 34320995 -132329301 - B1F1 SINE Alu -50 99 17 7 846 398 193 177 35 chrX 34321073 34321186 -132329110 - B1F SINE Alu -2 147 19 7 846 358 312 0 18 chrX 34321207 34321321 -132328975 - PB1D10 SINE Alu 0 117 6 7 846 1119 240 107 38 chrX 34321351 34321697 -132328599 + ORR1D2 LTR MaLR 1 370 0 7 846 372 300 82 16 chrX 34321784 34322099 -132328197 - L2a LINE L2 -48 3378 3043 7 846 2294 103 3 17 chrX 34322103 34322450 -132327846 + MTB_Mm LTR MaLR 58 399 -8 7 846 388 323 60 8 chrX 34322452 34322586 -132327710 + B3A SINE B2 36 176 -22 7 846 1225 54 0 0 chrX 34322620 34322767 -132327529 + B1_Mus2 SINE Alu 1 147 0 7 846 872 228 56 0 chrX 34322808 34323005 -132327291 + B3 SINE B2 1 208 -8 7 846 234 305 68 41 chrX 34323140 34323287 -132327009 - L2a LINE L2 -894 2525 2375 7 846 254 229 33 0 chrX 34323307 34323368 -132326928 + MLT1E2 LTR MaLR 1 63 -442 7 846 336 221 161 11 chrX 34323390 34323477 -132326819 - PB1D10 SINE Alu -8 109 10 7 846 1073 308 173 13 chrX 34323484 34323958 -132326338 + MLT1E2 LTR MaLR 74 623 -4 7 846 817 214 88 0 chrX 34324077 34324269 -132326027 + B3 SINE B2 1 209 -7 7 846 654 58 0 0 chrX 34324475 34324562 -132325734 + (GGAA)n Simple_repeat Simple_repeat 4 90 0 7 846 1084 184 82 137 chrX 34324566 34324981 -132325315 - RLTR9C LTR ERVK 0 393 2 7 846 612 38 0 0 chrX 34324981 34325060 -132325236 + (GGAA)n Simple_repeat Simple_repeat 4 82 0 7 846 326 333 89 20 chrX 34325122 34325370 -132324926 + L1ME2 LINE L1 5863 6127 -37 7 846 465 242 0 0 chrX 34325376 34325475 -132324821 + PB1D10 SINE Alu 9 107 -10 7 846 1478 96 33 12 chrX 34325835 34326077 -132324219 - RLTR9A LTR ERVK -1 367 121 7 846 1396 175 11 26 chrX 34326077 34326347 -132323949 - ETnERV2-int LTR ERVK -4509 2897 2632 7 846 950 105 20 7 chrX 34326362 34326515 -132323781 + RMER16 LTR ERVK 379 533 0 7 846 260 275 108 40 chrX 34326691 34326839 -132323457 - L3 LINE CR1 -2183 2306 2149 7 846 466 295 49 0 chrX 34326856 34326978 -132323318 + RSINE1 SINE B4 28 155 -10 7 846 253 318 189 0 chrX 34327029 34327177 -132323119 - L3 LINE CR1 -2332 2157 1982 7 846 236 299 67 67 chrX 34327180 34327345 -132322951 + YREP_Mm Unknown Unknown 128 292 -1520 7 846 412 232 97 9 chrX 34327246 34327359 -132322937 - B1F SINE Alu -17 132 10 7 846 822 99 129 8 chrX 34327396 34327528 -132322768 + B1_Mus1 SINE Alu 1 148 0 7 846 772 147 0 23 chrX 34327576 34327708 -132322588 + B1_Mur3 SINE Alu 1 129 -20 7 846 558 124 0 0 chrX 34327711 34327800 -132322496 + (GGAA)n Simple_repeat Simple_repeat 3 91 0 7 846 267 54 0 0 chrX 34327869 34327906 -132322390 + (GA)n Simple_repeat Simple_repeat 1 37 0 7 846 341 236 96 3 chrX 34328026 34328126 -132322170 - PB1D10 SINE Alu 0 117 13 7 846 275 250 125 0 chrX 34328187 34328259 -132322037 + ID4 SINE ID 1 81 -2 7 846 309 204 57 0 chrX 34328261 34328349 -132321947 + L1MA4 LINE L1 5231 5323 -817 7 846 1262 91 28 0 chrX 34328351 34328527 -132321769 + B2_Mm2 SINE B2 2 182 -13 7 846 225 0 0 0 chrX 34328650 34328675 -132321621 + (CAAT)n Simple_repeat Simple_repeat 1 25 0 7 846 706 193 89 0 chrX 34328728 34328863 -132321433 + B1_Mus1 SINE Alu 2 148 0 7 846 1117 289 80 26 chrX 34328928 34329393 -132320903 + L1MA4 LINE L1 5324 5811 -548 7 846 377 286 8 10 chrX 34329605 34329736 -132320560 + L1MA4 LINE L1 5716 5846 -454 7 846 441 0 0 0 chrX 34329739 34329788 -132320508 + (TAAAA)n Simple_repeat Simple_repeat 2 50 0 7 846 270 346 0 0 chrX 34329789 34329870 -132320426 + ID4_ SINE ID 3 83 0 7 846 443 293 152 43 chrX 34329881 34330045 -132320251 + B3A SINE B2 1 182 -16 7 846 423 0 0 0 chrX 34330058 34330105 -132320191 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 7 846 675 208 23 0 chrX 34330120 34330250 -132320046 + B1_Mur1 SINE Alu 2 134 -15 7 846 415 196 36 0 chrX 34330250 34330388 -132319908 + GA-rich Low_complexity Low_complexity 1 143 0 7 846 232 245 0 0 chrX 34330427 34330476 -132319820 + ID4 SINE ID 33 81 -2 7 846 238 31 0 0 chrX 34330669 34330701 -132319595 + L1_Mus1 LINE L1 6522 6553 -14 7 846 274 247 40 45 chrX 34330772 34330926 -132319370 + Lx7 LINE L1 7563 7681 -15 7 846 1245 41 0 0 chrX 34330956 34331102 -132319194 + B1_Mm SINE Alu 1 146 -1 7 846 191 61 0 29 chrX 34331113 34331147 -132319149 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 7 846 269 231 0 4 chrX 34331244 34331325 -132318971 + L1_Mur3 LINE L1 4206 4285 -1595 7 846 359 256 0 12 chrX 34331406 34331489 -132318807 + B4A SINE B4 135 216 -76 7 846 189 0 0 0 chrX 34331544 34331565 -132318731 + (GGAA)n Simple_repeat Simple_repeat 1 21 0 7 846 278 284 0 0 chrX 34331662 34331736 -132318560 + B4A SINE B4 11 84 -208 7 846 344 297 9 9 chrX 34331763 34331875 -132318421 + B4A SINE B4 160 271 -21 7 846 1874 261 46 56 chrX 34331903 34332246 -132318050 + L1MA6 LINE L1 4409 4756 -1387 7 846 336 64 0 0 chrX 34332246 34332293 -132318003 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 7 846 1874 261 46 56 chrX 34332293 34332392 -132317904 + L1MA6 LINE L1 4757 4848 -1295 7 846 1044 30 114 0 chrX 34332392 34332523 -132317773 - B1_Mus2 SINE Alu -1 146 1 7 846 1874 261 46 56 chrX 34332523 34332925 -132317371 + L1MA6 LINE L1 4849 5246 -897 7 846 552 27 14 0 chrX 34332960 34333034 -132317262 + BC1_Mm scRNA scRNA 1 75 -77 7 846 811 94 8 8 chrX 34333034 34333162 -132317134 + (GAA)n Simple_repeat Simple_repeat 1 128 0 7 846 396 309 13 7 chrX 34333163 34333337 -132316959 + L1MA6 LINE L1 5794 5969 -1675 7 846 1878 180 59 34 chrX 34333720 34334049 -132316247 + MTD LTR MaLR 1 342 -77 7 846 1358 66 55 6 chrX 34334049 34334231 -132316065 + B2_Mm2 SINE B2 2 192 -3 7 846 1878 180 59 34 chrX 34334231 34334310 -132315986 + MTD LTR MaLR 343 419 0 7 846 248 188 13 80 chrX 34334969 34335044 -132315252 + MER96B DNA hAT 72 141 -276 7 846 329 0 24 0 chrX 34335301 34335342 -132314954 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 7 846 282 254 113 0 chrX 34337370 34337441 -132312855 - ID4_ SINE ID -4 79 1 7 846 263 169 0 110 chrX 34337451 34337524 -132312772 - ID_B1 SINE B4 -1 223 159 7 846 433 186 47 0 chrX 34337462 34337548 -132312748 - B1_Mur1 SINE Alu -7 142 53 7 846 318 275 0 0 chrX 34337966 34338035 -132312261 + ID4 SINE ID 2 70 -13 7 846 287 182 73 0 chrX 34338213 34338268 -132312028 + tRNA-Ala-GCY_ tRNA tRNA 8 66 -9 7 846 248 258 61 0 chrX 34338268 34338279 -132312017 + BC1_Mm scRNA scRNA 14 83 -69 7 846 390 163 346 30 chrX 34338864 34338965 -132311331 - B1_Mus1 SINE Alu -15 133 1 7 846 207 100 0 0 chrX 34339920 34339950 -132310346 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 7 846 1185 56 0 36 chrX 34339950 34340117 -132310179 - B2_Mm2 SINE B2 -34 161 1 7 846 242 331 133 7 chrX 34340190 34340333 -132309963 + MIRb SINE MIR 98 258 -10 7 846 348 291 27 18 chrX 34340371 34340483 -132309813 + MIRc SINE MIR 85 197 -71 7 847 333 0 0 0 chrX 34341597 34341634 -132308662 + (T)n Simple_repeat Simple_repeat 1 37 0 7 847 268 256 23 70 chrX 34343156 34343304 -132306992 + Arthur1B DNA Tip100 50 177 0 7 847 261 291 12 25 chrX 34343498 34343579 -132306717 + MIR SINE MIR 100 179 -83 7 847 411 38 0 0 chrX 34343653 34343706 -132306590 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 7 847 261 83 0 0 chrX 34343829 34343865 -132306431 + (T)n Simple_repeat Simple_repeat 1 36 0 7 847 912 62 139 0 chrX 34343865 34343994 -132306302 - B1_Mus1 SINE Alu 0 148 2 7 847 228 351 52 0 chrX 34344065 34344142 -132306154 - ID4_ SINE ID 0 83 3 7 847 265 24 48 0 chrX 34344581 34344623 -132305673 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 7 847 263 198 139 50 chrX 34344675 34344776 -132305520 + ID2 SINE ID 7 116 -36 7 847 369 0 0 0 chrX 34344985 34345026 -132305270 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 847 368 287 0 94 chrX 34345065 34345192 -132305104 - PB1D10 SINE Alu -2 115 1 7 847 333 254 94 39 chrX 34345347 34345474 -132304822 - MIRb SINE MIR -36 232 99 7 847 346 240 94 19 chrX 34345563 34345669 -132304627 + PB1D10 SINE Alu 2 115 -2 7 847 252 0 0 0 chrX 34345921 34345949 -132304347 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 847 235 303 0 15 chrX 34346258 34346325 -132303971 - RSINE1 SINE B4 -4 161 96 7 847 479 200 9 45 chrX 34346517 34346627 -132303669 + L2a LINE L2 3309 3414 -12 7 847 235 351 22 30 chrX 34347276 34347411 -132302885 - MIRb SINE MIR -11 257 124 7 847 514 172 11 0 chrX 34347434 34347527 -132302769 - MTD LTR MaLR -223 196 103 7 847 273 252 78 39 chrX 34347531 34347634 -132302662 + MIR SINE MIR 92 198 -64 7 847 189 26 51 26 chrX 34347654 34347693 -132302603 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 7 847 233 230 93 13 chrX 34348690 34348765 -132301531 + MIR SINE MIR 58 138 -70 7 847 23 0 0 0 chrX 34349785 34349808 -132300488 + AT_rich Low_complexity Low_complexity 1 23 0 7 847 838 42 219 0 chrX 34349809 34349928 -132300368 - B1_Mus1 SINE Alu -2 146 2 7 847 216 0 0 0 chrX 34349931 34349955 -132300341 + (TAA)n Simple_repeat Simple_repeat 1 24 0 7 847 281 297 126 8 chrX 34350009 34350128 -132300168 + MIRc SINE MIR 2 134 -134 7 847 308 174 310 60 chrX 34350177 34350293 -132300003 - B2_Mm2 SINE B2 -1 194 50 7 847 1243 90 11 22 chrX 34350367 34350548 -132299748 - B2_Mm1t SINE B2 -14 179 1 7 847 1623 232 30 18 chrX 34350556 34350956 -132299340 - MTD LTR MaLR -14 405 1 7 847 264 30 0 0 chrX 34351616 34351649 -132298647 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 7 847 618 153 76 8 chrX 34352006 34352125 -132298171 - B1_Mur4 SINE Alu -18 132 6 7 847 344 269 77 26 chrX 34352127 34352337 -132297959 + MIR SINE MIR 39 255 -7 8 847 572 219 103 6 chrX 34352776 34352941 -132297355 - B3 SINE B2 -13 203 23 8 847 762 252 109 73 chrX 34353105 34353186 -132297110 - B4A SINE B4 0 292 226 8 847 1212 41 0 13 chrX 34353186 34353335 -132296961 - B1_Mus1 SINE Alu 0 148 2 8 847 762 252 109 73 chrX 34353335 34353527 -132296769 - B4A SINE B4 -67 225 9 8 847 1199 54 0 0 chrX 34353580 34353727 -132296569 - B1_Mus2 SINE Alu 0 147 1 8 847 806 247 50 40 chrX 34353753 34353955 -132296341 - B3 SINE B2 -6 210 7 8 847 974 242 188 7 chrX 34354737 34355162 -132295134 - RMER5 LTR ERV1 0 534 33 8 847 403 297 24 72 chrX 34355256 34355423 -132294873 + RSINE1 SINE B4 5 163 -2 8 847 265 292 0 0 chrX 34355661 34355726 -132294570 + B1F SINE Alu 34 98 -51 8 847 180 0 0 0 chrX 34355727 34355747 -132294549 + (T)n Simple_repeat Simple_repeat 1 20 0 8 847 1249 34 0 0 chrX 34355747 34355894 -132294402 - B1_Mus2 SINE Alu 0 147 1 8 847 202 241 0 36 chrX 34355951 34356007 -132294289 + GA-rich Low_complexity Low_complexity 3 56 0 8 847 1857 150 80 18 chrX 34356091 34356477 -132293819 + RMER17C LTR ERVK 1 410 0 8 847 219 258 0 31 chrX 34357180 34357244 -132293052 + C-rich Low_complexity Low_complexity 1 62 0 8 847 349 363 39 35 chrX 34357383 34357637 -132292659 + MIR SINE MIR 2 256 -6 8 847 609 167 0 34 chrX 34357741 34357859 -132292437 - B1_Mur3 SINE Alu -1 148 35 8 847 277 249 83 172 chrX 34357889 34358093 -132292203 - Lx8 LINE L1 -5 7468 7283 8 847 217 173 19 0 chrX 34358093 34358145 -132292151 + (TTTG)n Simple_repeat Simple_repeat 3 55 0 8 847 482 263 26 0 chrX 34358147 34358261 -132292035 - ID_B1 SINE B4 -5 219 103 8 847 204 40 0 0 chrX 34358273 34358298 -132291998 + (TC)n Simple_repeat Simple_repeat 1 25 0 8 847 536 144 10 0 chrX 34358298 34358395 -132291901 + B2_Mm1t SINE B2 87 184 -9 8 847 1208 43 0 0 chrX 34358404 34358545 -132291751 + B1_Mus1 SINE Alu 1 141 -7 8 847 180 0 0 0 chrX 34358545 34358565 -132291731 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 847 704 241 0 7 chrX 34358645 34358787 -132291509 + B1_Mur1 SINE Alu 3 143 -6 8 847 374 296 71 0 chrX 34359881 34359979 -132290317 + RSINE1 SINE B4 57 161 -4 8 847 411 21 0 0 chrX 34359993 34360041 -132290255 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 847 459 0 0 0 chrX 34360041 34360091 -132290205 + (GA)n Simple_repeat Simple_repeat 2 52 0 8 847 502 225 69 142 chrX 34360754 34360987 -132289309 - B3 SINE B2 0 216 1 8 847 521 229 16 41 chrX 34361023 34361146 -132289150 + PB1D7 SINE Alu 1 120 0 8 847 894 122 0 0 chrX 34361549 34361688 -132288608 - B1_Mus1 SINE Alu 0 148 10 8 847 1404 80 21 0 chrX 34361902 34362090 -132288206 - B2_Mm2 SINE B2 -3 192 1 8 847 477 245 0 0 chrX 34362246 34362352 -132287944 + B1_Mur1 SINE Alu 44 149 0 8 847 315 0 0 0 chrX 34362835 34362870 -132287426 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 8 847 1010 70 6 97 chrX 34362870 34362928 -132287368 - B2_Mm1a SINE B2 -33 160 119 8 847 1596 47 0 10 chrX 34362928 34363122 -132287174 + B2_Mm1a SINE B2 1 192 -1 8 847 1010 70 6 97 chrX 34363122 34363238 -132287058 - B2_Mm1a SINE B2 -75 118 2 8 847 348 191 29 0 chrX 34363343 34363411 -132286885 - B3A SINE B2 -128 70 1 8 847 21 36 0 0 chrX 34363419 34363447 -132286849 + AT_rich Low_complexity Low_complexity 1 28 0 8 847 804 165 8 0 chrX 34363447 34363574 -132286722 + B1_Mus1 SINE Alu 1 128 -20 8 847 192 125 0 0 chrX 34363577 34363609 -132286687 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 847 540 229 0 18 chrX 34363611 34363722 -132286574 - PB1D10 SINE Alu -8 109 1 8 847 450 0 0 0 chrX 34364262 34364312 -132285984 + (GA)n Simple_repeat Simple_repeat 1 50 0 8 847 459 250 21 0 chrX 34364879 34364975 -132285321 + PB1D7 SINE Alu 13 110 -10 8 847 210 37 0 0 chrX 34364977 34365004 -132285292 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 847 591 284 102 16 chrX 34365628 34365882 -132284414 + B4A SINE B4 2 277 -15 8 847 210 150 0 0 chrX 34365887 34365927 -132284369 + (CAGA)n Simple_repeat Simple_repeat 3 42 0 8 847 843 276 171 73 chrX 34366085 34366407 -132283889 + MER63C DNA AcHobo 115 500 -430 8 847 180 0 0 0 chrX 34366407 34366427 -132283869 + (GA)n Simple_repeat Simple_repeat 2 21 0 8 847 843 276 171 73 chrX 34366427 34366758 -132283538 + MER63C DNA AcHobo 501 841 -89 8 847 1122 54 0 93 chrX 34366758 34366920 -132283376 - B1_Mus2 SINE Alu 0 147 1 8 847 843 276 171 73 chrX 34366920 34367003 -132283293 + MER63C DNA AcHobo 842 923 -7 8 847 327 127 0 0 chrX 34367121 34367184 -132283112 + (TCTG)n Simple_repeat Simple_repeat 4 66 0 8 847 436 169 46 46 chrX 34367190 34367277 -132283019 - B1_Mur1 SINE Alu 0 149 63 8 847 339 25 0 0 chrX 34367277 34367317 -132282979 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 847 1208 47 0 13 chrX 34367451 34367601 -132282695 - B1_Mus1 SINE Alu 0 148 1 8 847 204 343 46 9 chrX 34368053 34368162 -132282134 + MIR SINE MIR 37 149 -113 8 847 295 349 94 20 chrX 34368590 34368792 -132281504 - B4A SINE B4 -75 217 1 8 847 618 191 79 29 chrX 34369175 34369315 -132280981 - B1_Mur4 SINE Alu -2 148 2 8 847 544 323 6 25 chrX 34369350 34369512 -132280784 - B3A SINE B2 -7 191 33 8 847 518 265 14 22 chrX 34369524 34369663 -132280633 - B1F1 SINE Alu -2 147 10 8 847 452 264 24 66 chrX 34369531 34369697 -132280599 - ID_B1 SINE B4 -7 217 59 8 847 272 283 98 0 chrX 34370016 34370108 -132280188 - MIRc SINE MIR -135 133 33 8 847 991 251 5 0 chrX 34370663 34370878 -132279418 + ID_B1 SINE B4 9 224 0 8 847 1478 36 46 5 chrX 34370900 34371094 -132279202 + L1Md_F3 LINE L1 6382 6583 -1 8 847 271 250 29 0 chrX 34371179 34371247 -132279049 + BC1_Mm scRNA scRNA 1 70 -82 8 847 231 146 0 0 chrX 34371328 34371383 -132278913 + (CAGA)n Simple_repeat Simple_repeat 2 56 0 8 847 268 258 45 0 chrX 34371593 34371659 -132278637 + ID2 SINE ID 15 83 0 8 847 1400 146 14 0 chrX 34372343 34372562 -132277734 - URR1A DNA MER1_type -2 224 3 8 847 292 202 31 125 chrX 34373150 34373246 -132277050 + PB1D10 SINE Alu 31 117 0 8 847 762 252 24 14 chrX 34373479 34373692 -132276604 - B3 SINE B2 0 216 2 8 847 790 248 24 5 chrX 34374448 34374660 -132275636 - ID_B1 SINE B4 -3 221 7 8 847 4386 70 23 5 chrX 34375129 34375705 -132274591 - L1Md_F2 LINE L1 -12 6570 5985 8 847 239 194 48 16 chrX 34375768 34375831 -132274465 - B3 SINE B2 0 216 152 8 847 203 250 0 37 chrX 34375833 34375887 -132274409 - MIR SINE MIR -203 59 8 8 847 318 50 0 0 chrX 34376248 34376288 -132274008 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 847 452 250 43 22 chrX 34376566 34376705 -132273591 - L1MA5 LINE L1 -18 6282 6141 8 847 404 276 99 72 chrX 34377013 34377306 -132272990 - L2a LINE L2 -191 3235 2935 8 847 313 283 170 52 chrX 34377445 34377598 -132272698 - B4A SINE B4 -120 172 2 8 847 411 236 95 27 chrX 34377599 34377737 -132272559 - L1M5 LINE L1 -1533 4613 4464 8 847 1172 48 21 0 chrX 34377737 34377882 -132272414 - B1_Mus1 SINE Alu 0 148 1 8 847 854 95 260 13 chrX 34377928 34378078 -132272218 - B2_Mm2 SINE B2 -8 187 1 8 847 180 0 0 0 chrX 34378154 34378174 -132272122 + (TG)n Simple_repeat Simple_repeat 1 20 0 8 847 594 0 0 0 chrX 34378177 34378243 -132272053 + (GA)n Simple_repeat Simple_repeat 1 66 0 8 847 342 317 40 0 chrX 34378252 34378353 -132271943 - PB1 SINE Alu -16 111 7 8 847 597 222 0 8 chrX 34378384 34378502 -132271794 - PB1D10 SINE Alu 0 117 1 8 847 389 310 0 0 chrX 34378663 34378763 -132271533 + ID_B1 SINE B4 1 100 -124 8 847 264 183 83 0 chrX 34378761 34378821 -132271475 + B1F SINE Alu 78 142 -7 8 847 280 331 45 17 chrX 34379378 34379556 -132270740 + L2 LINE L2 1920 2102 -1317 8 847 648 356 55 4 chrX 34379584 34379821 -132270475 + LTR33A LTR ERVL 44 292 -228 8 847 276 100 0 0 chrX 34379911 34379951 -132270345 + (TC)n Simple_repeat Simple_repeat 1 40 0 8 847 1337 64 47 0 chrX 34379972 34380144 -132270152 - B2_Mm2 SINE B2 -14 181 2 8 847 270 247 38 25 chrX 34380487 34380566 -132269730 + L2 LINE L2 2388 2467 -952 8 847 370 200 233 9 chrX 34380566 34380682 -132269614 + RSINE1 SINE B4 3 144 -21 8 847 262 346 88 27 chrX 34380736 34380997 -132269299 + L2 LINE L2 2517 2793 -626 8 847 508 273 82 5 chrX 34381016 34381184 -132269112 + B3A SINE B2 1 180 -18 8 847 279 0 0 0 chrX 34381184 34381215 -132269081 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 847 508 273 82 5 chrX 34381215 34381230 -132269066 + B3A SINE B2 181 197 -1 8 847 368 227 0 26 chrX 34381248 34381325 -132268971 + ID4_ SINE ID 1 75 -8 8 847 651 240 45 0 chrX 34381370 34381549 -132268747 + Lx9 LINE L1 7236 7422 -222 8 847 1148 44 0 0 chrX 34381580 34381716 -132268580 + B1_Mus2 SINE Alu 3 138 -9 8 847 210 37 0 0 chrX 34381716 34381743 -132268553 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 847 1183 62 7 0 chrX 34382118 34382263 -132268033 - B1_Mus2 SINE Alu -1 146 1 8 847 312 292 146 64 chrX 34382276 34382543 -132267753 - B4 SINE B4 0 292 4 8 847 967 88 184 0 chrX 34382589 34382736 -132267560 - B2_Mm1t SINE B2 -19 174 1 8 847 333 297 93 8 chrX 34382777 34382906 -132267390 - RSINE1 SINE B4 -4 161 22 8 847 281 167 0 60 chrX 34383390 34383467 -132266829 + L1MA5 LINE L1 5841 5936 -364 8 847 430 259 64 14 chrX 34383674 34383815 -132266481 + ID_B1 SINE B4 77 224 0 9 847 903 195 92 0 chrX 34383828 34384013 -132266283 + B3 SINE B2 2 203 -13 9 847 292 271 16 54 chrX 34384093 34384222 -132266074 + L1MB3 LINE L1 4382 4505 -1641 9 847 408 20 0 0 chrX 34384321 34384370 -132265926 + (TATG)n Simple_repeat Simple_repeat 4 52 0 9 847 1163 50 0 0 chrX 34384370 34384510 -132265786 - B1_Mm SINE Alu -7 140 1 9 847 334 272 69 26 chrX 34384795 34384984 -132265312 + L1MC LINE L1 4571 4767 -1379 9 847 464 278 0 0 chrX 34384992 34385100 -132265196 + PB1 SINE Alu 1 108 -19 9 847 635 226 7 27 chrX 34385244 34385394 -132264902 - B1_Mur1 SINE Alu 0 149 3 9 847 357 330 35 6 chrX 34385399 34385573 -132264723 + L1MD LINE L1 4850 5028 -1118 9 847 775 198 14 81 chrX 34385624 34385833 -132264463 + B3A SINE B2 4 198 0 9 847 248 273 60 60 chrX 34385845 34386028 -132264268 + L1MB3 LINE L1 5188 5370 -776 9 847 1131 42 28 0 chrX 34386070 34386213 -132264083 + B1_Mus1 SINE Alu 1 147 -1 9 847 319 268 316 38 chrX 34386254 34386466 -132263830 + L1MB3 LINE L1 5336 5606 -583 9 847 247 315 78 35 chrX 34386466 34386506 -132263790 + PB1 SINE Alu 1 47 -80 9 847 387 0 0 0 chrX 34386506 34386549 -132263747 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 9 847 293 260 4 2 chrX 34386549 34386623 -132263673 + B1F SINE Alu 48 141 -8 9 847 236 314 43 0 chrX 34386635 34386705 -132263591 + ID4_ SINE ID 9 81 -2 9 847 1188 68 0 13 chrX 34386825 34386974 -132263322 - B1_Mus1 SINE Alu 0 148 2 9 847 804 295 155 5 chrX 34386977 34387376 -132262920 + L1MB3 LINE L1 5676 6134 -49 9 847 684 191 114 0 chrX 34387384 34387515 -132262781 + B1_Mur2 SINE Alu 2 147 -2 9 847 228 250 50 50 chrX 34387592 34387672 -132262624 + ID2 SINE ID 4 83 0 9 847 1215 116 30 45 chrX 34387744 34387942 -132262354 + B2_Mm2 SINE B2 1 195 0 9 847 638 206 222 6 chrX 34387973 34388144 -132262152 + B3 SINE B2 1 208 -8 9 847 403 302 8 0 chrX 34388192 34388311 -132261985 + ID_B1 SINE B4 105 224 0 9 847 226 79 53 0 chrX 34388406 34388444 -132261852 + L1MC LINE L1 5391 5430 -2355 9 847 187 274 78 67 chrX 34389250 34389340 -132260956 + MIR SINE MIR 122 212 -50 9 847 333 208 125 0 chrX 34390246 34390318 -132259978 - ID4_ SINE ID 0 83 3 9 847 284 308 38 9 chrX 34390725 34390760 -132259536 + PB1D10 SINE Alu 1 35 -82 9 847 351 0 0 0 chrX 34390760 34390799 -132259497 + (GA)n Simple_repeat Simple_repeat 2 40 0 9 847 284 308 38 9 chrX 34390799 34390868 -132259428 + PB1D10 SINE Alu 36 107 -10 9 847 546 243 53 3 chrX 34391437 34391571 -132258725 + ID_B1 SINE B4 103 245 -47 9 847 204 179 0 0 chrX 34391573 34391612 -132258684 + GA-rich Low_complexity Low_complexity 2 40 0 9 847 1088 97 0 7 chrX 34391965 34392101 -132258195 + B1_Mus1 SINE Alu 4 139 -9 9 847 212 0 0 35 chrX 34392101 34392130 -132258166 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 9 847 186 43 0 0 chrX 34392148 34392171 -132258125 + (CATA)n Simple_repeat Simple_repeat 3 25 0 9 847 382 220 97 21 chrX 34393001 34393094 -132257202 - PB1D10 SINE Alu 0 117 18 9 847 206 317 87 0 chrX 34393177 34393281 -132257015 - MIR3 SINE MIR -92 116 4 9 847 741 156 26 78 chrX 34393598 34393751 -132256545 - B1_Mur4 SINE Alu 0 150 6 9 847 286 279 42 31 chrX 34393779 34393798 -132256498 - B3 SINE B2 -118 98 2 9 847 315 286 26 0 chrX 34393798 34393875 -132256421 - B4A SINE B4 -212 80 2 9 847 287 226 46 89 chrX 34394137 34394160 -132256136 + ID SINE ID 4 53 -171 9 847 265 189 113 0 chrX 34394160 34394213 -132256083 + ID4 SINE ID 15 73 -10 9 847 287 226 46 89 chrX 34394213 34394227 -132256069 + ID SINE ID 54 88 -136 9 847 202 280 18 115 chrX 34394546 34394659 -132255637 - MER5A DNA MER1_type -25 164 63 9 847 194 294 9 105 chrX 34394808 34394922 -132255374 - L4 LINE RTE -582 1447 1345 9 847 1070 61 44 22 chrX 34395134 34395269 -132255027 + B1_Mus1 SINE Alu 2 139 -9 9 847 594 178 93 0 chrX 34395295 34395402 -132254894 + B1_Mur2 SINE Alu 31 147 -2 9 847 272 198 301 24 chrX 34395543 34395709 -132254587 + L1ME1 LINE L1 5608 5819 -360 9 847 620 248 39 0 chrX 34395825 34395954 -132254342 + RSINE1 SINE B4 2 135 -30 9 847 656 135 0 7 chrX 34395956 34396105 -132254191 + (CAGG)n Simple_repeat Simple_repeat 2 149 0 9 847 343 291 99 7 chrX 34396276 34396418 -132253878 + L1ME1 LINE L1 5989 6143 -36 9 847 386 117 0 0 chrX 34396461 34396521 -132253775 + B1_Mus2 SINE Alu 88 147 0 9 847 389 268 35 9 chrX 34396541 34396654 -132253642 + PB1D10 SINE Alu 2 117 0 9 847 199 274 70 23 chrX 34397071 34397157 -132253139 - L2b LINE L2 0 3375 3286 9 847 246 290 116 0 chrX 34397237 34397306 -132252990 + MER2 DNA MER2_type 16 92 -253 9 847 827 317 14 14 chrX 34397307 34397592 -132252704 + B4A SINE B4 1 285 -7 9 847 405 0 0 0 chrX 34397614 34397659 -132252637 + (CA)n Simple_repeat Simple_repeat 1 45 0 9 847 279 0 0 0 chrX 34397786 34397817 -132252479 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 847 239 331 67 54 chrX 34398153 34398459 -132251837 + L2a LINE L2 2851 3167 -259 9 847 1152 190 29 20 chrX 34398628 34398832 -132251464 + B3 SINE B2 2 207 -9 9 847 508 294 7 27 chrX 34398930 34399077 -132251219 - B1F SINE Alu -5 144 1 9 847 2018 48 0 0 chrX 34399206 34399433 -132250863 + L1_Mus1 LINE L1 6341 6567 0 9 847 344 179 0 37 chrX 34399560 34399593 -132250703 + L1M4 LINE L1 3312 3342 -2804 9 847 243 0 0 0 chrX 34399593 34399620 -132250676 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 9 847 344 179 0 37 chrX 34399620 34399667 -132250629 + L1M4 LINE L1 3343 3389 -2757 9 847 485 225 17 43 chrX 34399697 34399813 -132250483 + PB1D10 SINE Alu 5 117 0 9 847 4662 93 7 2 chrX 34400205 34400786 -132249510 - MT2B2 LTR ERVL 0 584 1 9 847 262 279 161 16 chrX 34400897 34401021 -132249275 + ID_B1 SINE B4 80 221 -3 9 847 1232 172 35 0 chrX 34401060 34401263 -132249033 + B3 SINE B2 1 210 -6 9 847 242 226 38 0 chrX 34401446 34401499 -132248797 + RSINE1 SINE B4 89 143 -22 9 847 563 220 0 0 chrX 34401576 34401676 -132248620 + PB1D9 SINE Alu 2 101 -19 9 847 414 86 82 0 chrX 34401730 34401822 -132248474 + B1_Mur4 SINE Alu 45 150 0 9 847 339 280 52 81 chrX 34401842 34401978 -132248318 + MLT1C LTR MaLR 336 467 0 9 847 187 271 27 67 chrX 34401982 34402057 -132248239 + L2a LINE L2 3355 3426 0 9 847 888 150 0 0 chrX 34402077 34402210 -132248086 - B3 SINE B2 -82 134 2 9 847 486 0 0 0 chrX 34402337 34402391 -132247905 + (TA)n Simple_repeat Simple_repeat 1 54 0 9 847 287 291 208 100 chrX 34402391 34402521 -132247775 - ID_B1 SINE B4 -75 149 6 9 847 783 232 25 75 chrX 34402637 34402837 -132247459 + B3A SINE B2 1 190 -8 9 847 273 315 152 58 chrX 34402984 34403260 -132247036 + L2c LINE L2 3054 3355 -32 9 847 263 270 40 0 chrX 34403266 34403340 -132246956 + ID4_ SINE ID 3 79 -4 9 847 399 255 53 11 chrX 34403815 34403910 -132246386 + B1F SINE Alu 50 148 -1 9 847 299 250 133 20 chrX 34404467 34404565 -132245731 - RSINE1 SINE B4 -54 111 3 9 847 345 277 0 35 chrX 34404725 34404811 -132245485 - ID4_ SINE ID 0 83 1 9 847 744 219 53 27 chrX 34404816 34405014 -132245282 - B3 SINE B2 -1 194 1 9 847 856 194 71 39 chrX 34405053 34405235 -132245061 - B3 SINE B2 -2 214 27 9 847 1017 117 99 6 chrX 34405613 34405785 -132244511 - B2_Mm2 SINE B2 0 195 8 9 847 723 63 0 0 chrX 34405779 34405874 -132244422 - B1_Mus2 SINE Alu -52 95 1 9 847 1202 209 0 23 chrX 34406045 34406261 -132244035 + B3 SINE B2 1 211 -5 9 847 247 312 0 10 chrX 34406306 34406403 -132243893 - Lx8 LINE L1 -8 7465 7370 9 847 495 87 0 0 chrX 34406486 34406555 -132243741 + (TC)n Simple_repeat Simple_repeat 1 69 0 9 847 420 273 0 0 chrX 34406556 34406644 -132243652 - Lx8 LINE L1 -247 7226 7139 9 847 1047 251 54 29 chrX 34406659 34406938 -132243358 - Lx8 LINE L1 -411 7062 6777 9 847 4655 115 54 15 chrX 34406972 34407698 -132242598 + RMER6A LTR ERVK 3 756 0 9 847 29 28 0 0 chrX 34407706 34407742 -132242554 + AT_rich Low_complexity Low_complexity 1 36 0 9 847 342 293 20 10 chrX 34407845 34407945 -132242351 - PB1D10 SINE Alu -15 102 2 9 847 282 308 27 128 chrX 34407945 34408025 -132242271 - ID SINE ID -141 83 19 9 847 610 318 115 92 chrX 34408227 34408427 -132241869 - Cheshire DNA MER1_type -2 2418 2202 9 847 383 68 17 0 chrX 34408427 34408486 -132241810 + (TTTA)n Simple_repeat Simple_repeat 3 62 0 9 847 980 44 161 0 chrX 34408486 34408623 -132241673 - B2_Mm1a SINE B2 -33 160 2 9 847 610 318 115 92 chrX 34408623 34408734 -132241562 - Cheshire DNA MER1_type -219 2201 1905 9 847 1214 69 0 7 chrX 34408734 34408880 -132241416 - B1_Mus2 SINE Alu 0 147 3 9 847 610 318 115 92 chrX 34408880 34409148 -132241148 - Cheshire DNA MER1_type -516 1904 1668 9 847 297 0 0 0 chrX 34409148 34409181 -132241115 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 847 610 318 115 92 chrX 34409181 34409514 -132240782 - Cheshire DNA MER1_type -753 1667 1344 9 847 368 221 28 120 chrX 34409982 34410050 -132240246 - B1F SINE Alu -51 98 39 9 847 1422 82 22 11 chrX 34410050 34410235 -132240061 - B2_Mm2 SINE B2 -8 187 1 9 847 368 221 28 120 chrX 34410235 34410274 -132240022 - B1F SINE Alu -111 38 1 9 847 519 318 7 36 chrX 34410468 34410605 -132239691 + B1F SINE Alu 6 138 -11 9 847 3999 78 12 0 chrX 34410959 34411459 -132238837 - L1Md_F2 LINE L1 -3 6579 6074 9 847 238 299 134 0 chrX 34411510 34411577 -132238719 - ID4 SINE ID 0 83 8 9 847 729 344 23 19 chrX 34411620 34411881 -132238415 + MLT1E3 LTR MaLR 148 409 -215 9 847 337 311 82 0 chrX 34412425 34412438 -132237858 + MLT1E3 LTR MaLR 206 218 -406 9 847 414 0 0 0 chrX 34412438 34412484 -132237812 + (GA)n Simple_repeat Simple_repeat 1 46 0 9 847 337 311 82 0 chrX 34412484 34412592 -132237704 + MLT1E3 LTR MaLR 219 336 -288 9 847 202 192 248 20 chrX 34412706 34412807 -132237489 - L3 LINE CR1 -144 4345 4222 9 847 218 57 0 54 chrX 34413107 34413144 -132237152 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 9 847 1136 29 0 0 chrX 34413144 34413284 -132237012 - B1_Mus2 SINE Alu 0 147 8 1 847 442 207 48 102 chrX 34413179 34413346 -132236950 - MT2B LTR ERVL -337 264 107 1 847 243 0 0 0 chrX 34413414 34413441 -132236855 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1 847 201 74 0 0 chrX 34413761 34413788 -132236508 + (CAAT)n Simple_repeat Simple_repeat 1 27 0 1 847 732 238 18 9 chrX 34413838 34414005 -132236291 + ID_B1 SINE B4 80 251 -41 1 847 258 32 0 0 chrX 34414563 34414594 -132235702 + (CCTG)n Simple_repeat Simple_repeat 3 33 0 1 847 1262 54 0 7 chrX 34415953 34416102 -132234194 - B1_Mus1 SINE Alu 0 148 1 1 847 684 196 107 14 chrX 34416102 34416242 -132234054 - Lx6 LINE L1 -764 6696 6544 1 847 296 250 0 30 chrX 34416249 34416315 -132233981 - B1_Mur3 SINE Alu -85 64 1 1 847 464 264 98 53 chrX 34416381 34416513 -132233783 + B1_Mur1 SINE Alu 10 147 -2 1 847 227 276 10 58 chrX 34416533 34416637 -132233659 - L1MD2 LINE L1 -18 6341 6243 1 847 206 32 0 31 chrX 34416643 34416675 -132233621 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 1 847 889 66 8 16 chrX 34416675 34416798 -132233498 - B1_Mus1 SINE Alu 0 148 27 1 847 225 185 130 0 chrX 34416798 34416852 -132233444 - L1MD2 LINE L1 -105 6254 6194 1 847 1121 84 0 7 chrX 34417281 34417424 -132232872 + B1_Mus2 SINE Alu 1 142 -5 1 847 511 158 316 0 chrX 34417562 34417676 -132232620 - B1_Mur4 SINE Alu 0 150 1 1 847 1352 146 22 31 chrX 34417717 34417944 -132232352 - URR1B DNA MER1_type 0 225 1 1 847 1254 55 0 0 chrX 34418465 34418610 -132231686 + B1_Mus2 SINE Alu 1 145 -2 1 847 1014 85 0 0 chrX 34418766 34418930 -132231366 + (TA)n Simple_repeat Simple_repeat 2 165 0 1 847 1105 72 14 7 chrX 34418935 34419075 -132231221 - B1_Mus2 SINE Alu -6 141 1 1 847 378 232 253 0 chrX 34419576 34419671 -132230625 - B3 SINE B2 -41 175 57 1 847 688 193 59 0 chrX 34419942 34420077 -132230219 + B1_Mur2 SINE Alu 2 144 -5 1 847 232 316 0 25 chrX 34420280 34420361 -132229935 - ID4 SINE ID -4 79 1 1 847 325 293 80 0 chrX 34420474 34420549 -132229747 - RSINE1 SINE B4 -28 137 57 1 847 193 222 16 16 chrX 34420549 34420613 -132229683 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 847 779 115 60 23 chrX 34420636 34420769 -132229527 - B1_Mus1 SINE Alu -4 144 7 1 847 320 279 92 62 chrX 34420656 34420786 -132229510 - B4 SINE B4 -82 210 77 1 847 212 330 32 80 chrX 34420796 34420921 -132229375 - RSINE1 SINE B4 0 165 47 1 847 215 179 70 56 chrX 34422048 34422119 -132228177 - MER5A DNA MER1_type -5 184 113 1 847 199 318 16 0 chrX 34422068 34422131 -132228165 + MER5A DNA MER1_type 37 100 -89 1 847 24 0 0 0 chrX 34424338 34424362 -132225934 + AT_rich Low_complexity Low_complexity 1 24 0 1 847 711 180 57 14 chrX 34424636 34424777 -132225519 + B1_Mur1 SINE Alu 1 147 -2 1 847 889 219 23 55 chrX 34424788 34425005 -132225291 + B3 SINE B2 1 210 -6 1 847 21 71 0 0 chrX 34425022 34425064 -132225232 + AT_rich Low_complexity Low_complexity 1 42 0 1 847 1229 67 127 0 chrX 34425995 34426160 -132224136 - B2_Mm1t SINE B2 -7 186 1 1 847 647 182 188 62 chrX 34427003 34427179 -132223117 + B3A SINE B2 1 198 0 1 847 617 195 133 0 chrX 34431354 34431482 -132218814 + B1_Mus2 SINE Alu 3 147 0 1 847 1092 226 14 14 chrX 34431970 34432185 -132218111 + B3 SINE B2 1 215 -1 1 847 765 219 238 31 chrX 34432355 34432708 -132217588 + L1MC5 LINE L1 6692 7117 -844 1 847 1304 48 0 0 chrX 34432723 34432869 -132217427 + B1_Mus2 SINE Alu 2 147 0 1 847 545 243 149 8 chrX 34432902 34433073 -132217223 - B3A SINE B2 -19 197 2 1 847 484 274 123 58 chrX 34433178 34433456 -132216840 + L1MD2 LINE L1 4817 5114 -1032 1 847 723 250 70 0 chrX 34433456 34433656 -132216640 + B3 SINE B2 3 216 0 1 847 484 274 123 58 chrX 34433656 34433792 -132216504 + L1MD2 LINE L1 5115 5258 -888 1 847 1040 308 10 50 chrX 34433841 34434142 -132216154 + B4A SINE B4 2 290 -2 1 847 1442 259 76 47 chrX 34434183 34434420 -132215876 + L1MD2 LINE L1 5344 5592 -767 1 847 1296 27 0 27 chrX 34434420 34434570 -132215726 - B1_Mus2 SINE Alu 0 147 2 1 847 1442 259 76 47 chrX 34434570 34434819 -132215477 + L1MD2 LINE L1 5593 5844 -515 1 847 588 217 13 74 chrX 34434935 34435084 -132215212 - RSINE1 SINE B4 -24 141 2 1 847 430 280 178 31 chrX 34435217 34435346 -132214950 - RSINE1 SINE B4 -14 151 4 1 847 345 200 27 9 chrX 34435396 34435483 -132214813 - B1F1 SINE Alu -56 91 1 1 847 25 102 0 0 chrX 34435971 34436059 -132214237 + AT_rich Low_complexity Low_complexity 1 88 0 1 847 1081 234 5 43 chrX 34436065 34436275 -132214021 - B3 SINE B2 -13 203 2 1 847 333 282 0 13 chrX 34437067 34437146 -132213150 - ID4_ SINE ID -3 80 3 1 847 221 203 0 181 chrX 34437662 34437693 -132212603 + PB1D9 SINE Alu 1 26 -94 1 847 603 200 304 6 chrX 34437693 34437854 -132212442 - B3 SINE B2 -3 213 5 1 847 221 203 0 181 chrX 34437854 34437894 -132212402 + PB1D9 SINE Alu 27 59 -61 1 847 587 159 0 36 chrX 34437910 34438021 -132212275 + B1_Mur4 SINE Alu 43 149 -1 1 847 235 179 14 43 chrX 34438022 34438092 -132212204 + A-rich Low_complexity Low_complexity 2 69 0 1 847 210 37 0 0 chrX 34438213 34438240 -132212056 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 847 183 267 48 48 chrX 34438573 34438636 -132211660 + L4 LINE RTE 1002 1064 -965 1 847 967 248 38 9 chrX 34438771 34438983 -132211313 + ID_B1 SINE B4 2 219 -5 1 847 963 145 12 12 chrX 34439005 34439172 -132211124 + B2_Mm2 SINE B2 2 168 -27 1 847 324 0 0 0 chrX 34439175 34439211 -132211085 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1 847 943 86 107 0 chrX 34439211 34439351 -132210945 - B2_Mm2 SINE B2 -39 156 2 1 847 252 0 0 0 chrX 34439374 34439402 -132210894 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 1 847 1322 38 0 0 chrX 34439402 34439562 -132210734 - B2_Mm1a SINE B2 -33 160 1 1 847 383 343 36 7 chrX 34439605 34439743 -132210553 + MER5A DNA MER1_type 18 159 -30 1 847 382 267 9 62 chrX 34439750 34439862 -132210434 - PB1D10 SINE Alu -2 115 10 1 847 744 262 106 57 chrX 34439940 34440229 -132210067 + B4A SINE B4 3 292 0 1 847 208 121 0 0 chrX 34440240 34440273 -132210023 + (CAGAGA)n Simple_repeat Simple_repeat 6 38 0 1 847 262 223 110 19 chrX 34440998 34441119 -132209177 + MIRc SINE MIR 79 199 -63 1 847 267 164 0 0 chrX 34442895 34442956 -132207340 + (CGG)n Simple_repeat Simple_repeat 2 62 0 1 847 226 170 21 21 chrX 34443341 34443389 -132206907 + GA-rich Low_complexity Low_complexity 2 49 0 1 847 324 0 0 0 chrX 34443968 34444004 -132206292 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 847 223 268 8 242 chrX 34444007 34444027 -132206269 - PB1D7 SINE Alu -15 105 8 1 847 394 315 19 0 chrX 34444027 34444135 -132206161 - ID_B1 SINE B4 -26 198 89 1 847 320 233 0 14 chrX 34445036 34445110 -132205186 + MLT1A1 LTR MaLR 14 86 -279 1 847 736 220 196 0 chrX 34445113 34445286 -132205010 + B3 SINE B2 4 210 -6 1 847 271 300 104 57 chrX 34445308 34445414 -132204882 + PB1D10 SINE Alu 1 111 -6 1 847 396 0 0 0 chrX 34445419 34445463 -132204833 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 847 762 257 75 34 chrX 34445475 34445753 -132204543 + MLT1A1 LTR MaLR 72 391 -17 1 847 408 155 0 0 chrX 34446409 34446480 -132203816 + GA-rich Low_complexity Low_complexity 1 71 0 1 847 406 164 0 0 chrX 34446731 34446798 -132203498 + ID4_ SINE ID 2 68 -15 1 847 34 0 0 0 chrX 34447458 34447492 -132202804 + AT_rich Low_complexity Low_complexity 1 34 0 1 847 388 202 0 37 chrX 34447648 34447730 -132202566 - PB1D7 SINE Alu 0 120 42 1 847 306 0 0 0 chrX 34448049 34448083 -132202213 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 847 342 0 0 0 chrX 34448235 34448273 -132202023 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 847 1460 73 0 20 chrX 34448314 34448509 -132201787 + B2_Mm2 SINE B2 1 191 -4 1 847 294 143 0 0 chrX 34448513 34448562 -132201734 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 847 290 372 19 19 chrX 34449025 34449046 -132201250 - RSINE1 SINE B4 -4 161 142 1 847 315 0 0 0 chrX 34449046 34449081 -132201215 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 847 290 372 19 19 chrX 34449081 34449218 -132201078 - RSINE1 SINE B4 -24 141 3 1 847 502 254 79 7 chrX 34449273 34449412 -132200884 + B3 SINE B2 1 149 -67 1 847 369 0 0 0 chrX 34449417 34449458 -132200838 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 847 22 35 0 0 chrX 34449458 34449487 -132200809 + AT_rich Low_complexity Low_complexity 1 29 0 1 847 3106 39 39 0 chrX 34449661 34450042 -132200254 + MTA_Mm LTR MaLR 1 396 0 1 847 320 306 37 9 chrX 34450079 34450188 -132200108 - B1F SINE Alu -37 112 1 1 847 703 241 19 0 chrX 34450188 34450260 -132200036 - ID SINE ID -142 82 8 1 847 424 236 57 68 chrX 34450428 34450605 -132199691 - B3A SINE B2 -19 179 5 1 847 1220 34 7 0 chrX 34450635 34450781 -132199515 - B1_Mus1 SINE Alu 0 148 2 1 847 600 248 7 14 chrX 34450822 34450961 -132199335 - RSINE1 SINE B4 -25 140 3 1 847 273 325 108 0 chrX 34451058 34451178 -132199118 - B1F2 SINE Alu -6 143 11 1 847 272 346 70 76 chrX 34451178 34451230 -132199066 - ID_B1 SINE B4 -6 218 48 1 847 248 130 22 0 chrX 34451244 34451290 -132199006 + CT-rich Low_complexity Low_complexity 3 49 0 1 847 243 0 0 0 chrX 34451290 34451317 -132198979 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1 847 549 227 0 15 chrX 34451352 34451486 -132198810 - RSINE1 SINE B4 -5 160 29 1 847 200 344 82 0 chrX 34454101 34454223 -132196073 + MIRc SINE MIR 18 149 -119 1 847 618 250 28 7 chrX 34454464 34454609 -132195687 + B1_Mur1 SINE Alu 1 148 -1 1 847 207 0 0 0 chrX 34455161 34455184 -132195112 + (CAAAAA)n Simple_repeat Simple_repeat 1 23 0 1 847 393 22 0 0 chrX 34456814 34456860 -132193436 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 847 261 0 0 0 chrX 34458684 34458713 -132191583 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 1 847 255 291 97 54 chrX 34458737 34459035 -132191261 + L1MC5 LINE L1 7619 7929 -32 1 847 369 0 0 0 chrX 34459319 34459360 -132190936 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 847 622 283 0 32 chrX 34459361 34459518 -132190778 - B3A SINE B2 -46 152 1 1 847 21 0 0 0 chrX 34459520 34459541 -132190755 + AT_rich Low_complexity Low_complexity 1 21 0 1 847 428 244 51 25 chrX 34459552 34459670 -132190626 - RSINE1 SINE B4 -6 159 39 1 847 495 0 0 0 chrX 34460108 34460163 -132190133 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 847 235 325 39 0 chrX 34460914 34460991 -132189305 + ID4 SINE ID 2 81 -2 1 847 359 125 22 101 chrX 34461233 34461322 -132188974 - B1_Mm SINE Alu -7 140 59 1 847 1085 186 71 0 chrX 34462118 34462328 -132187968 - URR1A DNA MER1_type 0 226 2 1 847 402 69 0 0 chrX 34462680 34462738 -132187558 + (TC)n Simple_repeat Simple_repeat 1 58 0 1 847 456 19 0 0 chrX 34462763 34462816 -132187480 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 847 220 224 47 106 chrX 34463278 34463363 -132186933 - 7SLRNA srpRNA srpRNA -234 80 1 1 847 683 243 13 7 chrX 34463292 34463445 -132186851 - B4A SINE B4 -133 159 6 1 847 870 226 0 40 chrX 34463584 34463608 -132186688 - B3 SINE B2 -25 191 168 1 847 450 0 0 0 chrX 34463608 34463658 -132186638 + (TC)n Simple_repeat Simple_repeat 2 51 0 1 847 870 226 0 40 chrX 34463658 34463831 -132186465 - B3 SINE B2 -49 167 2 1 847 1027 248 128 18 chrX 34464362 34464698 -132185598 + MTEb LTR MaLR 2 374 -5 1 847 1082 198 5 42 chrX 34464839 34465055 -132185241 + B3 SINE B2 2 209 -7 1 847 400 318 82 86 chrX 34465085 34465377 -132184919 - B4 SINE B4 0 292 2 1 847 198 0 0 0 chrX 34465577 34465599 -132184697 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1 847 261 305 57 64 chrX 34465824 34465964 -132184332 + MER3 DNA MER1_type 4 142 -67 1 847 417 211 0 26 chrX 34466015 34466093 -132184203 - ID4 SINE ID -7 76 1 1 847 250 266 63 11 chrX 34466101 34466196 -132184100 - PB1D10 SINE Alu 0 117 18 1 847 468 244 25 13 chrX 34466212 34466370 -132183926 + L1MA7 LINE L1 6132 6291 0 1 847 397 304 0 26 chrX 34466377 34466492 -132183804 + PB1D10 SINE Alu 5 116 -1 1 847 408 20 0 0 chrX 34467109 34467158 -132183138 + (TCTCTG)n Simple_repeat Simple_repeat 4 52 0 1 847 302 200 13 13 chrX 34467158 34467234 -132183062 - MIR SINE MIR -70 138 63 1 847 185 320 109 53 chrX 34468018 34468414 -132181882 - L2 LINE L2 -854 2565 2148 1 847 273 296 39 48 chrX 34469389 34469416 -132180880 - BC1_Mm scRNA scRNA -49 103 2 1 847 310 250 66 0 chrX 34469416 34469492 -132180804 - ID SINE ID -142 82 2 1 847 441 250 34 27 chrX 34469517 34469665 -132180631 - B1F1 SINE Alu 0 149 1 1 847 238 329 89 30 chrX 34470609 34470778 -132179518 - L2c LINE L2 -33 3354 3176 1 847 1416 147 23 0 chrX 34471570 34471788 -132178508 - URR1A DNA MER1_type -3 223 1 1 105 564 286 0 29 chrX 34471910 34472047 -132178249 + ID_B1 SINE B4 84 216 -8 1 848 324 271 0 48 chrX 34472533 34472630 -132177666 + ID4 SINE ID 3 95 -57 1 848 474 18 0 0 chrX 34472970 34473025 -132177271 + (CATAG)n Simple_repeat Simple_repeat 5 59 0 1 848 426 39 0 0 chrX 34473107 34473159 -132177137 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 848 255 301 50 73 chrX 34473159 34473378 -132176918 - L1ME3B LINE L1 -43 6197 5984 1 848 575 250 82 44 chrX 34473400 34473559 -132176737 - RSINE1 SINE B4 0 165 1 1 848 619 277 54 0 chrX 34473578 34473762 -132176534 - B3A SINE B2 -3 195 2 1 848 448 280 95 18 chrX 34473855 34474077 -132176219 - L1ME3B LINE L1 -321 5919 5681 1 848 548 159 0 6 chrX 34474732 34474836 -132175460 + GA-rich Low_complexity Low_complexity 2 105 0 1 848 920 111 0 6 chrX 34474836 34475017 -132175279 + (GGA)n Simple_repeat Simple_repeat 1 180 0 1 848 548 159 0 6 chrX 34475017 34475070 -132175226 + polypurine Low_complexity Low_complexity 106 158 0 1 848 4692 57 10 8 chrX 34476180 34476779 -132173517 - L1Md_F2 LINE L1 0 6582 5983 1 848 567 268 88 65 chrX 34477172 34477458 -132172838 - MLT1A0 LTR MaLR -3 405 73 1 848 301 0 22 43 chrX 34477481 34477527 -132172769 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 1 848 590 150 135 48 chrX 34477527 34477653 -132172643 - B1_Mur4 SINE Alu -13 137 1 1 848 754 255 70 16 chrX 34477688 34477875 -132172421 - B3A SINE B2 -1 197 1 1 848 274 265 0 56 chrX 34477898 34477970 -132172326 - ID4_ SINE ID -13 70 3 1 848 445 219 79 21 chrX 34477984 34478124 -132172172 - B1F SINE Alu 0 149 2 1 848 180 0 0 0 chrX 34478315 34478335 -132171961 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1 848 360 0 0 0 chrX 34478737 34478777 -132171519 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1 848 620 198 0 0 chrX 34478778 34478889 -132171407 - ID_B1 SINE B4 -15 209 99 1 848 443 271 9 0 chrX 34478927 34479034 -132171262 + PB1D10 SINE Alu 1 108 -9 1 848 456 19 0 0 chrX 34479724 34479777 -132170519 + (TTTTC)n Simple_repeat Simple_repeat 2 54 0 1 848 329 271 90 40 chrX 34479778 34479878 -132170418 - PB1D10 SINE Alu -12 105 1 1 848 923 180 107 10 chrX 34481016 34481212 -132169084 + B3 SINE B2 2 216 0 1 848 747 300 78 7 chrX 34481454 34481723 -132168573 + B4A SINE B4 2 289 -3 1 848 464 309 120 5 chrX 34482353 34482561 -132167735 - MIR SINE MIR 0 262 31 1 848 549 230 283 6 chrX 34482881 34483047 -132167249 + ID_B1 SINE B4 2 213 -11 1 848 333 301 58 1 chrX 34483856 34483991 -132166305 + MIRc SINE MIR 36 179 -89 1 848 4802 206 77 7 chrX 34484010 34484980 -132165316 + Lx7 LINE L1 6386 7423 -273 1 848 570 67 0 0 chrX 34485000 34485075 -132165221 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 848 341 148 0 0 chrX 34485104 34485165 -132165131 + Lx7 LINE L1 7615 7675 -21 1 848 27 0 0 0 chrX 34485187 34485214 -132165082 + AT_rich Low_complexity Low_complexity 1 27 0 1 848 439 326 44 35 chrX 34485271 34485497 -132164799 + B4A SINE B4 63 290 -2 1 848 206 307 27 0 chrX 34485502 34485577 -132164719 + (CATA)n Simple_repeat Simple_repeat 2 78 0 1 848 2651 44 9 3 chrX 34485678 34485999 -132164297 - L1_Mus1 LINE L1 -1 6566 6244 1 848 739 245 75 15 chrX 34486037 34486236 -132164060 + B3 SINE B2 1 211 -5 1 848 231 291 60 60 chrX 34486337 34486454 -132163842 + MamSINE1 SINE tRNA 172 288 -2 1 848 333 47 0 0 chrX 34487517 34487560 -132162736 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 1 848 741 167 15 0 chrX 34487560 34487692 -132162604 - B1_Mur2 SINE Alu -9 140 7 1 848 310 245 0 102 chrX 34487594 34487712 -132162584 - MT2B LTR ERVL -344 257 152 1 848 591 288 22 0 chrX 34487711 34487850 -132162446 - B1F1 SINE Alu -7 142 1 1 848 320 280 27 0 chrX 34487878 34487953 -132162343 + Lx8 LINE L1 7192 7268 -205 1 848 619 274 0 104 chrX 34488047 34488230 -132162066 + RSINE1 SINE B4 2 165 0 1 848 1286 20 0 0 chrX 34488350 34488496 -132161800 + B1_Mus1 SINE Alu 1 146 -2 1 848 698 0 12 0 chrX 34488743 34488825 -132161471 + (TTCC)n Simple_repeat Simple_repeat 3 85 0 1 848 23 0 0 0 chrX 34488825 34488848 -132161448 + AT_rich Low_complexity Low_complexity 1 23 0 1 848 672 259 7 14 chrX 34488849 34488994 -132161302 - RSINE1 SINE B4 -14 151 8 1 848 204 67 0 0 chrX 34489400 34489430 -132160866 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 1 848 1023 228 19 5 chrX 34490206 34490413 -132159883 - B3 SINE B2 -3 213 4 1 848 980 278 122 12 chrX 34490455 34490881 -132159415 + Charlie4a DNA MER1_type 17 489 -19 1 848 890 146 0 0 chrX 34491155 34491292 -132159004 + B1_Mur4 SINE Alu 2 138 -12 1 848 261 0 0 0 chrX 34491292 34491321 -132158975 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 1 848 419 293 23 25 chrX 34491582 34491718 -132158578 + L1MB2 LINE L1 5898 6028 -146 1 848 1538 38 0 0 chrX 34491718 34491901 -132158395 - L1_Mus1 LINE L1 0 6567 6385 1 848 270 311 53 153 chrX 34491901 34492007 -132158289 + L1MB2 LINE L1 6029 6117 -57 1 848 307 283 65 9 chrX 34492099 34492206 -132158090 + L2 LINE L2 456 568 -2851 1 848 587 209 18 0 chrX 34492646 34492756 -132157540 - PB1 SINE Alu -11 116 5 1 848 484 156 0 0 chrX 34493951 34494028 -132156268 - ID_B1 SINE B4 -5 219 143 1 848 2008 254 41 2 chrX 34494028 34494489 -132155807 + Lx7 LINE L1 6842 7320 -376 1 848 201 222 12 24 chrX 34494502 34494585 -132155711 + T-rich Low_complexity Low_complexity 4 85 0 1 848 292 274 17 17 chrX 34494585 34494700 -132155596 + Lx7 LINE L1 7565 7679 -17 1 848 706 250 91 11 chrX 34494729 34494915 -132155381 - B3 SINE B2 -10 206 6 1 848 503 331 37 12 chrX 34495091 34495253 -132155043 - B3A SINE B2 -30 168 3 1 848 360 282 0 0 chrX 34495257 34495335 -132154961 - ID_B1 SINE B4 -68 156 79 1 848 543 279 7 7 chrX 34495825 34495966 -132154330 + RSINE1 SINE B4 4 144 -21 1 848 2922 159 21 36 chrX 34495990 34496570 -132153726 + RMER15 LTR ERVL 5 575 0 1 848 411 296 151 37 chrX 34497146 34497586 -132152710 - L1M5 LINE L1 -2073 5809 5330 1 848 27 62 0 0 chrX 34497690 34497738 -132152558 + AT_rich Low_complexity Low_complexity 1 48 0 1 848 726 209 75 27 chrX 34497738 34497925 -132152371 - B3A SINE B2 -1 197 2 1 848 306 308 88 34 chrX 34497998 34498203 -132152093 - L1M5 LINE L1 -1056 5090 4875 1 848 258 291 17 60 chrX 34498617 34498734 -132151562 - MIRb SINE MIR -111 157 46 1 848 358 188 0 14 chrX 34498900 34498970 -132151326 - B1_Mur1 SINE Alu -3 146 78 1 848 453 19 0 0 chrX 34498976 34499030 -132151266 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 848 377 241 0 22 chrX 34499032 34499121 -132151175 - ID_B1 SINE B4 -9 215 129 1 848 771 276 28 5 chrX 34499216 34499434 -132150862 - ID_B1 SINE B4 -1 223 1 1 848 386 244 35 0 chrX 34499444 34499530 -132150766 - PB1D7 SINE Alu -7 113 25 1 848 286 299 19 116 chrX 34499714 34499869 -132150427 + B1F1 SINE Alu 5 144 -5 1 848 1077 31 0 0 chrX 34499869 34499998 -132150298 + (GGAGAA)n Simple_repeat Simple_repeat 5 133 0 1 848 635 0 0 13 chrX 34500000 34500076 -132150220 + (GAA)n Simple_repeat Simple_repeat 1 75 0 1 848 333 284 0 0 chrX 34500079 34500160 -132150136 + ID4_ SINE ID 3 83 0 2 848 344 292 57 0 chrX 34500326 34500432 -132149864 - PB1D10 SINE Alu 0 117 6 3 848 446 340 0 0 chrX 34500749 34500899 -132149397 + RSINE1 SINE B4 4 153 -12 4 848 27 62 0 0 chrX 34500931 34500979 -132149317 + AT_rich Low_complexity Low_complexity 1 48 0 5 848 531 228 30 10 chrX 34501175 34501294 -132149002 + B3A SINE B2 33 145 -50 6 848 1203 236 128 3 chrX 34501363 34501661 -132148635 + Lx8 LINE L1 6191 6525 -948 7 848 387 297 126 61 chrX 34501688 34501950 -132148346 + B4 SINE B4 2 280 -12 8 848 11311 136 12 24 chrX 34503031 34504275 -132146021 + Lx LINE L1 4048 5286 -597 9 848 2653 86 8 0 chrX 34504275 34504635 -132145661 + L1_Mus3 LINE L1 6276 6638 0 1 848 11311 99 43 26 chrX 34504635 34505963 -132144333 + Lx LINE L1 5287 6649 -5 9 848 535 299 75 0 chrX 34507796 34507970 -132142326 + ID_B1 SINE B4 4 190 -34 1 848 731 181 71 0 chrX 34508000 34508127 -132142169 + B1_Mur3 SINE Alu 5 140 -9 1 848 873 203 96 10 chrX 34509826 34510025 -132140271 + B3 SINE B2 1 216 0 1 848 499 149 23 0 chrX 34510151 34510238 -132140058 + B1_Mus2 SINE Alu 59 147 0 1 848 195 42 0 0 chrX 34510386 34510410 -132139886 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 848 325 279 0 0 chrX 34510577 34510656 -132139640 - ID4 SINE ID -1 82 4 1 848 218 306 28 0 chrX 34510938 34511010 -132139286 - MIRb SINE MIR -165 103 30 1 848 210 342 9 43 chrX 34511059 34511175 -132139121 - L2a LINE L2 0 3426 3315 1 848 195 125 0 0 chrX 34511856 34511896 -132138400 + (T)n Simple_repeat Simple_repeat 1 40 0 1 848 445 321 24 18 chrX 34513375 34513540 -132136756 + Tigger12c DNA MER2_type 82 247 -487 2 848 192 77 0 0 chrX 34513636 34513662 -132136634 + (TTAG)n Simple_repeat Simple_repeat 3 28 0 2 848 466 281 0 0 chrX 34513662 34513758 -132136538 - PB1D10 SINE Alu -12 105 10 2 848 240 250 83 0 chrX 34513707 34513767 -132136529 - B4 SINE B4 -147 145 81 2 848 497 309 85 10 chrX 34513765 34514080 -132136216 + Tigger12c DNA MER2_type 382 734 0 2 848 501 210 24 32 chrX 34514473 34514596 -132135700 + B1F SINE Alu 28 149 0 2 848 619 227 39 0 chrX 34515741 34515869 -132134427 + RSINE1 SINE B4 3 135 -30 2 848 294 29 0 0 chrX 34515897 34515932 -132134364 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 2 848 378 0 0 0 chrX 34516759 34516801 -132133495 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 848 390 237 0 13 chrX 34517383 34517460 -132132836 + ID4_ SINE ID 2 77 -6 2 848 798 194 44 59 chrX 34517724 34517927 -132132369 + B3 SINE B2 17 216 0 2 848 360 328 39 0 chrX 34518097 34518225 -132132071 - ID_B1 SINE B4 -8 216 84 3 848 720 271 17 6 chrX 34518485 34518663 -132131633 - B3A SINE B2 -18 180 1 3 848 276 170 0 0 chrX 34518856 34518909 -132131387 + (TATG)n Simple_repeat Simple_repeat 4 56 0 3 848 596 325 18 43 chrX 34518913 34519077 -132131219 - RSINE1 SINE B4 0 165 6 3 848 348 24 0 0 chrX 34519667 34519708 -132130588 + (A)n Simple_repeat Simple_repeat 1 41 0 3 848 209 57 29 0 chrX 34519838 34519873 -132130423 + (TTG)n Simple_repeat Simple_repeat 2 37 0 3 848 251 161 36 0 chrX 34521872 34521928 -132128368 + L1ME4a LINE L1 6064 6121 -3 3 848 289 280 14 96 chrX 34523009 34523155 -132127141 - MIR3 SINE MIR -23 185 52 3 848 220 373 17 43 chrX 34525197 34525312 -132124984 + L2b LINE L2 3263 3374 -1 3 848 249 310 14 27 chrX 34525651 34525724 -132124572 - RSINE1 SINE B4 -91 74 3 3 848 345 140 0 0 chrX 34525823 34525880 -132124416 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 848 535 154 279 0 chrX 34525881 34525985 -132124311 - B1_Mur3 SINE Alu -16 133 1 4 848 405 0 0 0 chrX 34529791 34529836 -132120460 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 848 706 279 19 24 chrX 34531917 34532130 -132118166 + ID_B1 SINE B4 1 212 -12 4 848 561 196 9 9 chrX 34532211 34532319 -132117977 + ID_B1 SINE B4 104 211 -13 4 848 433 273 81 16 chrX 34532428 34532551 -132117745 + RSINE1 SINE B4 11 141 -24 4 848 418 33 0 32 chrX 34532556 34532618 -132117678 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 848 416 203 0 0 chrX 34532710 34532784 -132117512 + RSINE1 SINE B4 90 163 -2 4 848 218 195 0 0 chrX 34532827 34532868 -132117428 + GA-rich Low_complexity Low_complexity 3 43 0 4 848 278 209 191 15 chrX 34532874 34532942 -132117354 + ID4 SINE ID 4 83 0 4 848 1149 263 39 52 chrX 34533200 34533585 -132116711 + Charlie22a DNA MER1_type 106 485 -6 5 848 286 228 0 0 chrX 34533848 34533905 -132116391 + MLT1A LTR MaLR 75 131 -243 5 848 558 270 116 5 chrX 34533963 34534153 -132116143 - B3 SINE B2 0 216 6 5 848 315 248 41 2 chrX 34534156 34534239 -132116057 - ID_B1 SINE B4 -67 157 77 5 848 650 210 51 0 chrX 34534341 34534479 -132115817 + ID_B1 SINE B4 80 224 0 5 848 263 319 0 0 chrX 34534523 34534592 -132115704 + ID4 SINE ID 4 72 -11 5 848 536 223 70 59 chrX 34534603 34534789 -132115507 + L1MA6 LINE L1 6062 6249 -51 5 848 206 349 46 28 chrX 34535016 34535125 -132115171 - L2b LINE L2 -204 3171 3061 5 848 285 295 39 0 chrX 34535125 34535203 -132115093 - PB1D9 SINE Alu -11 109 29 5 848 632 262 40 23 chrX 34535133 34535309 -132114987 - ID_B1 SINE B4 -45 179 1 5 848 724 298 113 46 chrX 34535449 34535461 -132114835 + MTD LTR MaLR 6 13 -387 6 848 291 54 0 0 chrX 34535461 34535498 -132114798 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 6 848 1109 249 99 19 chrX 34535498 34535855 -132114441 + MTD LTR MaLR 14 419 0 6 848 180 225 0 0 chrX 34536155 34536195 -132114101 - L2b LINE L2 -3 3372 3333 6 848 929 146 0 6 chrX 34536428 34536594 -132113702 + GA-rich Low_complexity Low_complexity 1 165 0 6 848 2553 157 14 9 chrX 34536793 34537212 -132113084 - MTC LTR MaLR 0 421 1 6 848 264 399 43 53 chrX 34537360 34537664 -132112632 + L4 LINE RTE 1053 1353 -676 6 848 29 0 0 0 chrX 34537767 34537796 -132112500 + AT_rich Low_complexity Low_complexity 1 29 0 6 848 588 271 66 46 chrX 34537923 34538225 -132112071 - Charlie13a DNA Charlie -87 1427 1120 6 848 726 122 7 58 chrX 34538228 34538367 -132111929 + B1_Mur4 SINE Alu 9 140 -10 6 848 207 0 0 0 chrX 34538369 34538392 -132111904 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 848 736 196 136 0 chrX 34538398 34538582 -132111714 + B3 SINE B2 1 209 -7 7 848 452 294 9 153 chrX 34538621 34538711 -132111585 + ID SINE ID 16 72 -152 7 848 560 290 0 46 chrX 34538711 34538863 -132111433 + B1F2 SINE Alu 1 145 -4 7 848 822 194 206 0 chrX 34538967 34539142 -132111154 + B3 SINE B2 2 212 -4 7 848 387 0 0 0 chrX 34539153 34539196 -132111100 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 848 613 263 8 0 chrX 34539269 34539402 -132110894 - ID_B1 SINE B4 -13 211 78 7 848 404 219 31 20 chrX 34539558 34539656 -132110640 + PB1D10 SINE Alu 18 116 -1 7 848 260 307 13 13 chrX 34539656 34539732 -132110564 + ID4_ SINE ID 3 78 -5 7 848 1128 156 18 32 chrX 34539825 34540043 -132110253 + B3 SINE B2 2 216 0 7 848 922 250 123 13 chrX 34540367 34540683 -132109613 - Charlie13a DNA Charlie -661 853 503 6 848 433 329 132 0 chrX 34540702 34540915 -132109381 - Charlie13a DNA Charlie -1092 422 182 6 848 381 356 13 44 chrX 34540998 34541227 -132109069 + MIR SINE MIR 20 241 -21 7 848 411 279 17 43 chrX 34541250 34541366 -132108930 - PB1D10 SINE Alu 0 117 5 8 848 849 243 6 11 chrX 34541268 34541451 -132108845 - ID_B1 SINE B4 -42 182 1 8 848 30 0 0 0 chrX 34541540 34541570 -132108726 + AT_rich Low_complexity Low_complexity 1 30 0 8 848 2116 82 19 59 chrX 34541570 34541892 -132108404 - Lx3A LINE L1 -3 6978 6670 8 848 461 241 9 0 chrX 34541894 34542006 -132108290 + MLT1A0 LTR MaLR 42 154 -211 8 848 506 234 118 15 chrX 34542061 34542265 -132108031 + L1MB5 LINE L1 2887 3111 -3035 8 848 542 235 121 69 chrX 34542265 34542439 -132107857 + B3A SINE B2 1 183 -15 8 848 969 246 14 5 chrX 34542467 34542679 -132107617 + B3 SINE B2 1 214 -2 8 848 23 33 0 0 chrX 34542680 34542710 -132107586 + AT_rich Low_complexity Low_complexity 1 30 0 8 848 491 264 70 90 chrX 34542724 34543069 -132107227 + L1MB5 LINE L1 3121 3458 -2688 8 848 588 225 32 7 chrX 34543152 34543299 -132106997 - ID_B1 SINE B4 0 224 73 8 848 721 286 22 96 chrX 34543478 34543791 -132106505 - B4A SINE B4 -2 290 1 9 848 492 269 17 23 chrX 34543828 34544003 -132106293 + L1MB5 LINE L1 4525 4698 -1448 8 848 416 267 4 187 chrX 34544023 34544108 -132106188 + ID_B1 SINE B4 23 214 -10 9 848 488 244 7 100 chrX 34544108 34544258 -132106038 + B1F1 SINE Alu 4 139 -10 9 848 423 0 0 0 chrX 34544416 34544463 -132105833 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 848 347 0 23 0 chrX 34544463 34544505 -132105791 + (GA)n Simple_repeat Simple_repeat 1 44 0 9 848 475 318 48 45 chrX 34544541 34544831 -132105465 + B4A SINE B4 2 292 0 9 848 378 0 0 0 chrX 34544839 34544881 -132105415 + (TC)n Simple_repeat Simple_repeat 1 42 0 9 848 368 20 20 0 chrX 34544881 34544929 -132105367 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 848 469 198 28 0 chrX 34544943 34545049 -132105247 + L1MB5 LINE L1 4762 4870 -1276 8 848 494 250 8 8 chrX 34545050 34545171 -132105125 - MLT1A0 LTR MaLR 0 365 245 9 848 25 0 0 0 chrX 34545248 34545273 -132105023 + AT_rich Low_complexity Low_complexity 1 25 0 9 848 2316 199 152 20 chrX 34545305 34545895 -132104401 - Lx9 LINE L1 0 7644 6977 1 848 1218 192 4 13 chrX 34545924 34546161 -132104135 + Lx9 LINE L1 6693 6927 -717 1 848 842 272 5 9 chrX 34546180 34546399 -132103897 - ID_B1 SINE B4 -1 223 6 1 848 336 271 80 10 chrX 34546451 34546652 -132103644 + L1MB5 LINE L1 5131 5345 -801 8 848 297 0 0 0 chrX 34546712 34546745 -132103551 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 848 1239 247 21 112 chrX 34546903 34547406 -132102890 + L1MB5 LINE L1 5670 6129 -45 8 848 1204 180 19 0 chrX 34547406 34547617 -132102679 - B3 SINE B2 0 216 2 1 848 743 231 4 112 chrX 34547617 34547690 -132102606 + L1MB5 LINE L1 6120 6184 0 8 848 315 312 62 0 chrX 34547860 34547940 -132102356 - PB1D10 SINE Alu -32 85 1 1 848 598 219 16 0 chrX 34548009 34548137 -132102159 + B3 SINE B2 44 173 -43 1 848 593 288 0 36 chrX 34548210 34548376 -132101920 - RSINE1 SINE B4 -4 161 2 1 848 785 223 0 7 chrX 34548564 34548713 -132101583 - B1_Mur2 SINE Alu -1 148 1 1 848 405 283 49 28 chrX 34548713 34548855 -132101441 - Lx8 LINE L1 -145 7328 7184 1 848 232 388 82 42 chrX 34549170 34549375 -132100921 + L2c LINE L2 3006 3228 -159 1 848 552 30 0 0 chrX 34549375 34549441 -132100855 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 848 232 390 67 35 chrX 34549441 34549602 -132100694 + L2c LINE L2 3229 3413 -13 1 848 681 301 82 22 chrX 34549602 34550020 -132100276 + L1M5 LINE L1 5376 5823 -301 1 848 295 291 40 71 chrX 34550029 34550155 -132100141 + B4 SINE B4 2 123 -169 1 848 539 269 52 0 chrX 34550433 34550567 -132099729 - RSINE1 SINE B4 -22 143 3 1 848 595 255 57 0 chrX 34550606 34550747 -132099549 + B1F1 SINE Alu 1 149 0 1 848 29 60 0 0 chrX 34550806 34550856 -132099440 + AT_rich Low_complexity Low_complexity 1 50 0 1 848 232 321 28 9 chrX 34551181 34551288 -132099008 - MamRep605 Unknown Unknown -376 500 392 1 848 333 183 0 0 chrX 34551378 34551438 -132098858 - ID4 SINE ID -22 61 2 1 848 226 250 67 0 chrX 34552030 34552090 -132098206 - B1F SINE Alu -1 148 85 1 848 416 216 60 30 chrX 34552276 34552376 -132097920 - PB1D7 SINE Alu -5 115 13 1 848 635 176 17 0 chrX 34552477 34552596 -132097700 + B3 SINE B2 2 122 -94 1 848 766 182 15 0 chrX 34552605 34552737 -132097559 - B1_Mur2 SINE Alu -13 136 3 1 848 689 242 124 124 chrX 34553192 34553659 -132096637 - MLT1C LTR MaLR 0 467 1 1 848 310 315 27 9 chrX 34554079 34554191 -132096105 - MIRb SINE MIR -114 154 41 1 848 288 0 0 0 chrX 34554632 34554664 -132095632 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 848 438 20 0 0 chrX 34554666 34554717 -132095579 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 848 575 222 0 31 chrX 34555122 34555252 -132095044 - ORR1D1 LTR MaLR -82 292 167 1 848 348 244 24 0 chrX 34555259 34555341 -132094955 + ID_B1 SINE B4 55 138 -86 1 848 205 29 59 0 chrX 34555345 34555379 -132094917 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 1 848 670 188 60 116 chrX 34555387 34555586 -132094710 + B2_Mm2 SINE B2 3 190 -5 1 848 225 108 0 0 chrX 34555629 34555666 -132094630 + (A)n Simple_repeat Simple_repeat 1 37 0 1 848 521 286 27 48 chrX 34556633 34556763 -132093533 + B1F SINE Alu 5 132 -17 1 848 1632 183 118 15 chrX 34556763 34556971 -132093325 + ORR1D1 LTR MaLR 1 246 -128 1 848 216 0 0 0 chrX 34556971 34556995 -132093301 + (CCTG)n Simple_repeat Simple_repeat 3 26 0 1 848 1632 183 118 15 chrX 34556995 34557125 -132093171 + ORR1D1 LTR MaLR 247 373 -1 1 848 521 286 27 48 chrX 34557125 34557141 -132093155 + B1F SINE Alu 133 148 -1 1 848 193 304 18 0 chrX 34557297 34557353 -132092943 + L2b LINE L2 3272 3328 -47 1 848 223 193 52 17 chrX 34557444 34557502 -132092794 + CT-rich Low_complexity Low_complexity 5 64 0 1 848 344 360 7 14 chrX 34557508 34557649 -132092647 - B1_Mm SINE Alu -7 140 1 1 848 464 203 493 0 chrX 34557845 34557983 -132092313 + B3 SINE B2 2 207 -9 1 848 198 209 0 0 chrX 34557993 34558036 -132092260 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1 848 215 348 22 0 chrX 34558085 34558177 -132092119 - L2a LINE L2 -36 3390 3297 1 848 1274 252 103 60 chrX 34558185 34558706 -132091590 + L1MA6 LINE L1 5405 6010 -290 1 848 502 250 27 0 chrX 34558719 34558831 -132091465 + PB1D7 SINE Alu 1 115 -5 1 848 262 282 67 75 chrX 34558911 34559045 -132091251 + ID_B1 SINE B4 91 223 -1 1 848 352 209 12 21 chrX 34559049 34559142 -132091154 + L1MA6 LINE L1 6048 6143 -154 1 848 893 202 5 21 chrX 34559146 34559333 -132090963 + B2_Mm2 SINE B2 12 195 0 1 848 305 218 79 0 chrX 34559341 34559442 -132090854 + L1MA6 LINE L1 6121 6229 -71 1 848 398 212 140 10 chrX 34559442 34559542 -132090754 + PB1D10 SINE Alu 5 117 0 1 848 819 239 69 5 chrX 34559545 34559747 -132090549 + B3 SINE B2 2 216 0 1 848 254 270 178 10 chrX 34559765 34559866 -132090430 - Charlie7 DNA MER1_type -305 2307 2190 1 848 332 173 327 28 chrX 34559871 34559978 -132090318 + B1_Mur2 SINE Alu 1 139 -10 1 848 841 112 78 224 chrX 34559978 34560197 -132090099 - URR1A DNA MER1_type -13 213 27 1 848 732 224 28 7 chrX 34560319 34560463 -132089833 - B1_Mur2 SINE Alu -2 147 1 1 848 371 292 8 84 chrX 34560463 34560491 -132089805 - MT2B LTR ERVL -448 153 136 1 848 264 256 138 25 chrX 34560518 34560598 -132089698 + PB1D10 SINE Alu 40 128 -20 1 848 213 65 0 0 chrX 34560883 34560914 -132089382 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 848 482 148 241 0 chrX 34560920 34561028 -132089268 - B1_Mur3 SINE Alu -6 143 10 1 848 243 146 0 0 chrX 34561233 34561274 -132089022 + (T)n Simple_repeat Simple_repeat 1 41 0 1 848 388 295 70 45 chrX 34561349 34561505 -132088791 + MIR SINE MIR 100 259 -3 1 848 3486 157 49 51 chrX 34561546 34562158 -132088138 + RMER19C LTR ERVK 1 611 0 1 848 273 118 0 0 chrX 34562363 34562414 -132087882 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 848 601 288 22 0 chrX 34562417 34562556 -132087740 - RSINE1 SINE B4 -22 143 2 1 848 207 344 93 10 chrX 34562645 34562742 -132087554 - MIR SINE MIR -68 140 36 1 848 276 315 149 20 chrX 34563020 34563221 -132087075 - L2a LINE L2 -171 3255 3029 1 848 246 300 6 0 chrX 34563302 34563383 -132086913 + ID4 SINE ID 2 85 -67 1 848 430 285 43 31 chrX 34564204 34564367 -132085929 + RMER15 LTR ERVL 346 510 -65 1 848 2431 83 6 15 chrX 34564780 34565110 -132085186 + ORR1A2 LTR MaLR 1 327 0 1 848 870 219 20 66 chrX 34565153 34565349 -132084947 + B3A SINE B2 1 187 -11 1 848 21 71 0 0 chrX 34565349 34565391 -132084905 + AT_rich Low_complexity Low_complexity 1 42 0 1 848 1423 229 75 17 chrX 34565510 34565857 -132084439 + MTE2b LTR MaLR 1 367 -12 1 848 238 298 75 28 chrX 34565877 34565984 -132084312 - L3 LINE CR1 -52 4437 4326 1 848 771 247 13 0 chrX 34566032 34566186 -132084110 + B3A SINE B2 1 156 -42 1 848 512 297 150 12 chrX 34566211 34566378 -132083918 + B3A SINE B2 2 191 -7 1 848 381 287 0 0 chrX 34566445 34566532 -132083764 - ID_B1 SINE B4 -59 165 79 1 848 1269 190 109 43 chrX 34567132 34567455 -132082841 + MTD LTR MaLR 54 419 0 1 848 478 278 76 35 chrX 34567735 34567933 -132082363 - MIRb SINE MIR -58 210 5 1 848 266 287 56 87 chrX 34568691 34568817 -132081479 - B2_Mm2 SINE B2 -71 124 3 1 848 195 42 0 0 chrX 34568817 34568841 -132081455 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1 848 802 245 31 0 chrX 34568842 34568863 -132081433 - B3A SINE B2 0 198 177 1 848 297 0 0 0 chrX 34568863 34568896 -132081400 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 848 802 245 31 0 chrX 34568896 34568919 -132081377 - B3A SINE B2 -22 176 153 1 848 429 81 0 0 chrX 34568919 34568981 -132081315 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 848 802 245 31 0 chrX 34568981 34569127 -132081169 - B3A SINE B2 -46 152 3 1 848 460 198 23 0 chrX 34569347 34569433 -132080863 + B1_Mur2 SINE Alu 35 122 -27 1 848 481 295 124 48 chrX 34569686 34569896 -132080400 + MIR SINE MIR 18 243 -19 1 848 697 268 7 13 chrX 34569959 34570114 -132080182 - RSINE1 SINE B4 -11 154 1 1 848 520 144 108 49 chrX 34571295 34571397 -132078899 + B1F SINE Alu 1 108 -41 1 848 317 246 89 73 chrX 34571397 34571415 -132078881 + ID_B1 SINE B4 82 203 -21 1 848 248 49 0 47 chrX 34571415 34571458 -132078838 + (CAGAGA)n Simple_repeat Simple_repeat 3 43 0 1 848 478 250 0 0 chrX 34571728 34571816 -132078480 - RSINE1 SINE B4 -19 146 59 1 848 1105 112 55 22 chrX 34571854 34572003 -132078293 + B2_Mm2 SINE B2 2 158 -37 1 848 341 43 21 0 chrX 34572003 34572050 -132078246 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 1 848 1105 112 55 22 chrX 34572050 34572082 -132078214 + B2_Mm2 SINE B2 159 189 -6 1 848 349 246 118 44 chrX 34572467 34572603 -132077693 + MIRb SINE MIR 46 191 -77 1 848 303 49 0 0 chrX 34572617 34572658 -132077638 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 848 726 241 0 38 chrX 34572682 34572867 -132077429 - B3A SINE B2 -18 180 3 1 848 232 224 231 26 chrX 34573502 34573580 -132076716 + Charlie7 DNA MER1_type 1 94 -2518 1 848 312 27 0 0 chrX 34573592 34573629 -132076667 + (CAAT)n Simple_repeat Simple_repeat 3 39 0 1 848 1024 219 1 24 chrX 34573629 34573844 -132076452 + B3A SINE B2 3 210 -6 1 848 771 338 72 51 chrX 34573876 34574291 -132076005 + Charlie7 DNA MER1_type 148 571 -2041 1 848 718 201 28 28 chrX 34574411 34574554 -132075742 - B1_Mus1 SINE Alu -5 143 1 1 848 935 157 0 89 chrX 34574686 34574889 -132075407 + B2_Mm2 SINE B2 2 186 -9 1 848 23 0 0 0 chrX 34575027 34575050 -132075246 + AT_rich Low_complexity Low_complexity 1 23 0 1 848 1650 16 0 35 chrX 34575296 34575495 -132074801 + B2_Mm1t SINE B2 2 193 0 1 848 1469 157 72 22 chrX 34575564 34575876 -132074420 - ORR1C1 LTR MaLR 0 378 41 1 848 255 237 0 26 chrX 34575878 34575956 -132074340 - ORR1B1 LTR MaLR -257 137 62 1 848 612 156 42 43 chrX 34575994 34576139 -132074157 - ORR1D1 LTR MaLR -253 141 5 2 848 2725 53 59 6 chrX 34576622 34576963 -132073333 - RLTR10D LTR ERVK 0 359 1 2 848 600 121 8 16 chrX 34577445 34577571 -132072725 + L1_Mus4 LINE L1 6509 6633 -3 2 848 606 334 49 64 chrX 34577766 34578175 -132072121 + Charlie7 DNA MER1_type 848 1250 -1362 1 848 898 138 69 6 chrX 34578357 34578532 -132071764 + B2_Mm2 SINE B2 1 186 -9 2 848 10942 175 22 18 chrX 34578870 34579441 -132070855 + L1_Mur3 LINE L1 868 1431 -4446 2 848 1313 93 33 0 chrX 34579441 34579624 -132070672 + B2_Mm2 SINE B2 2 190 -5 2 848 10942 119 29 31 chrX 34579624 34580268 -132070028 + L1_Mur3 LINE L1 1432 2056 -3821 2 848 387 0 0 0 chrX 34580268 34580311 -132069985 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 848 10942 119 29 31 chrX 34580311 34580637 -132069659 + L1_Mur3 LINE L1 2057 2405 -3472 2 848 1224 113 32 0 chrX 34580637 34580822 -132069474 - B2_Mm1a SINE B2 -2 191 1 2 848 10942 119 29 31 chrX 34580822 34581522 -132068774 + L1_Mur3 LINE L1 2406 3111 -2766 2 848 805 174 121 29 chrX 34581522 34581746 -132068550 - ORR1C2 LTR MaLR -6 378 112 2 848 966 234 20 15 chrX 34581908 34582112 -132068184 + B3 SINE B2 3 207 -9 2 848 739 195 0 0 chrX 34582127 34582250 -132068046 + B1_Mus1 SINE Alu 9 131 -17 2 848 323 268 125 66 chrX 34582130 34582266 -132068030 + MT2B2 LTR ERVL 175 318 -266 2 848 334 269 26 0 chrX 34582281 34582359 -132067937 + PB1 SINE Alu 42 121 -6 2 848 242 314 0 28 chrX 34582369 34582441 -132067855 + ID4_ SINE ID 2 71 -12 2 848 429 20 0 0 chrX 34582446 34582496 -132067800 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 848 333 269 13 0 chrX 34582583 34582661 -132067635 - ID4 SINE ID -3 80 2 2 848 437 276 12 94 chrX 34583345 34583505 -132066791 + RSINE1 SINE B4 4 150 -15 2 848 209 83 0 27 chrX 34583538 34583575 -132066721 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 848 1293 211 154 3 chrX 34583701 34584020 -132066276 - ORR1D1 LTR MaLR -14 360 3 2 848 487 228 29 10 chrX 34584089 34584191 -132066105 + PB1D9 SINE Alu 3 106 -14 2 848 364 301 0 37 chrX 34584490 34584597 -132065699 + PB1D10 SINE Alu 13 115 -2 2 848 322 304 128 0 chrX 34584615 34584740 -132065556 + PB1D10 SINE Alu 2 142 -7 2 848 3824 116 38 14 chrX 34584798 34585385 -132064911 + MT2B LTR ERVL 1 601 0 2 848 329 180 16 0 chrX 34585520 34585581 -132064715 + ID4 SINE ID 5 66 -17 2 848 315 0 0 0 chrX 34585705 34585740 -132064556 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 848 385 221 26 88 chrX 34586728 34586842 -132063454 + B1F SINE Alu 40 146 -3 2 848 457 242 0 0 chrX 34586843 34586938 -132063358 + PB1D10 SINE Alu 1 95 -22 2 848 360 287 154 12 chrX 34587150 34587319 -132062977 + MIR SINE MIR 65 257 -5 2 848 507 262 33 0 chrX 34587661 34587783 -132062513 + ID_B1 SINE B4 92 217 -7 2 848 211 250 58 0 chrX 34587738 34587790 -132062506 + PB1D7 SINE Alu 66 120 0 2 848 189 0 0 0 chrX 34588211 34588232 -132062064 + (CTG)n Simple_repeat Simple_repeat 1 21 0 2 848 378 0 0 0 chrX 34590983 34591025 -132059271 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 848 1217 157 45 31 chrX 34592613 34592836 -132057460 - URR1A DNA MER1_type 0 226 1 2 848 309 237 208 56 chrX 34593003 34593128 -132057168 + MIRb SINE MIR 14 157 -111 2 848 698 99 0 29 chrX 34593360 34593464 -132056832 + B2_Mm1a SINE B2 84 184 -9 2 848 667 286 115 20 chrX 34593458 34593575 -132056721 + ID_B1 SINE B4 6 144 -80 2 848 180 0 0 0 chrX 34593575 34593595 -132056701 + (TG)n Simple_repeat Simple_repeat 2 21 0 2 848 667 286 115 20 chrX 34593595 34593677 -132056619 + ID_B1 SINE B4 145 224 0 2 848 403 216 100 30 chrX 34593907 34594007 -132056289 - PB1D7 SINE Alu -2 118 12 2 848 316 0 45 0 chrX 34594008 34594052 -132056244 + (TC)n Simple_repeat Simple_repeat 1 46 0 2 848 370 232 32 101 chrX 34594067 34594225 -132056071 - B1F SINE Alu -2 147 1 2 848 228 279 0 16 chrX 34594233 34594295 -132056001 + ID4_ SINE ID 3 63 -20 2 848 671 257 7 14 chrX 34594556 34594702 -132055594 + ID_B1 SINE B4 1 145 -79 2 848 360 169 169 0 chrX 34594645 34594716 -132055580 + B1F2 SINE Alu 8 90 -59 2 848 614 264 7 13 chrX 34594751 34594901 -132055395 + B1F2 SINE Alu 1 149 0 2 848 537 302 73 88 chrX 34594919 34595191 -132055105 - MLT1A0 LTR MaLR -23 342 75 2 848 562 217 101 0 chrX 34595553 34595682 -132054614 - B1_Mur2 SINE Alu 0 149 8 2 848 225 248 116 62 chrX 34595597 34595726 -132054570 - MT2B LTR ERVL -344 257 122 2 848 494 67 529 0 chrX 34595845 34595947 -132054349 + B2_Mm2 SINE B2 2 157 -38 2 848 270 0 0 0 chrX 34595947 34595977 -132054319 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 2 848 859 98 0 8 chrX 34595984 34596099 -132054197 - B2_Mm2 SINE B2 -72 123 9 2 848 207 0 0 0 chrX 34596099 34596122 -132054174 + (CCA)n Simple_repeat Simple_repeat 2 24 0 2 848 982 137 20 0 chrX 34596381 34596527 -132053769 + B1_Mur4 SINE Alu 2 150 0 2 848 1266 192 98 37 chrX 34596702 34596999 -132053297 - RLTR46 LTR ERVK -5 315 1 2 848 567 263 96 34 chrX 34596999 34597176 -132053120 - ID_B1 SINE B4 -36 188 1 2 848 425 302 69 53 chrX 34597345 34597534 -132052762 + B3A SINE B2 7 198 0 2 848 23 33 0 0 chrX 34597632 34597662 -132052634 + AT_rich Low_complexity Low_complexity 1 30 0 2 848 728 170 0 0 chrX 34597681 34597787 -132052509 + B1_Mus2 SINE Alu 30 135 -12 2 848 279 0 0 0 chrX 34597792 34597823 -132052473 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 848 258 179 0 0 chrX 34597868 34597924 -132052372 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 848 316 242 17 63 chrX 34598012 34598128 -132052168 + PB1D10 SINE Alu 2 115 -5 2 848 336 24 0 0 chrX 34598258 34598299 -132051997 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 848 540 189 118 29 chrX 34598299 34598424 -132051872 - B1_Mur4 SINE Alu -10 140 2 2 848 300 330 0 20 chrX 34598431 34598533 -132051763 + L1M5 LINE L1 5343 5442 -722 2 848 480 302 23 23 chrX 34598533 34598665 -132051631 + ID_B1 SINE B4 2 133 -91 2 848 602 262 84 12 chrX 34598684 34598830 -132051466 + B3A SINE B2 3 160 -38 2 848 240 35 0 0 chrX 34598830 34598859 -132051437 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 848 602 262 84 12 chrX 34598859 34598878 -132051418 + B3A SINE B2 161 179 -19 2 848 520 289 67 39 chrX 34598948 34599128 -132051168 + B3A SINE B2 6 190 -8 2 848 742 247 15 79 chrX 34599151 34599183 -132051113 + B3 SINE B2 2 32 -184 2 848 1133 45 0 0 chrX 34599183 34599317 -132050979 + B1_Mus1 SINE Alu 2 135 -13 2 848 206 32 32 0 chrX 34599317 34599348 -132050948 + (CAAAA)n Simple_repeat Simple_repeat 1 32 0 2 848 742 247 15 79 chrX 34599348 34599516 -132050780 + B3 SINE B2 33 189 -27 2 848 22 35 0 0 chrX 34599558 34599587 -132050709 + AT_rich Low_complexity Low_complexity 1 29 0 2 848 241 327 99 86 chrX 34600486 34600881 -132049415 + MLT2D LTR ERVL 13 412 -2 2 848 472 231 142 56 chrX 34600895 34601092 -132049204 + B3 SINE B2 2 215 -1 2 848 2430 55 3 3 chrX 34601322 34601633 -132048663 + L1Md_F2 LINE L1 6271 6581 -1 2 848 294 171 0 0 chrX 34601655 34601725 -132048571 + CT-rich Low_complexity Low_complexity 1 70 0 2 848 252 0 0 0 chrX 34601725 34601753 -132048543 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 848 407 255 13 0 chrX 34601758 34601881 -132048415 - PB1D10 SINE Alu -20 129 2 2 848 1127 292 68 5 chrX 34601881 34602280 -132048016 + L1MC3 LINE L1 7132 7555 -230 2 848 637 293 0 0 chrX 34602322 34602455 -132047841 + B1F SINE Alu 12 144 -5 2 848 1118 121 0 0 chrX 34602462 34602611 -132047685 + B1_Mur4 SINE Alu 1 149 -1 2 848 461 32 32 0 chrX 34602612 34602674 -132047622 + (CATA)n Simple_repeat Simple_repeat 2 65 0 2 848 680 260 24 81 chrX 34602748 34602957 -132047339 + B3A SINE B2 1 197 -1 2 849 928 169 0 0 chrX 34603092 34603240 -132047056 + B1_Mus1 SINE Alu 1 148 0 2 849 327 213 0 0 chrX 34603240 34603315 -132046981 + A-rich Low_complexity Low_complexity 1 75 0 2 849 221 299 33 33 chrX 34603484 34603574 -132046722 - MIRb SINE MIR -56 212 123 2 849 196 375 71 22 chrX 34603798 34604022 -132046274 + L2 LINE L2 2388 2622 -797 2 849 267 312 84 21 chrX 34604221 34604316 -132045980 + B1F SINE Alu 1 101 -48 2 849 204 97 0 0 chrX 34604316 34604347 -132045949 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 849 378 140 11 23 chrX 34604349 34604437 -132045859 + CT-rich Low_complexity Low_complexity 3 89 0 2 849 1097 255 82 48 chrX 34604439 34604818 -132045478 + Lx7 LINE L1 7051 7442 -254 2 849 3641 15 0 0 chrX 34604806 34605215 -132045081 + L1Md_T LINE L1 5178 5586 -297 2 849 8081 38 25 9 chrX 34605215 34606194 -132044102 + L1Md_T LINE L1 5587 6581 -1 2 849 263 197 0 32 chrX 34606213 34606276 -132044020 + Lx7 LINE L1 7615 7675 -21 2 849 270 0 0 0 chrX 34606277 34606307 -132043989 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 2 849 189 0 0 0 chrX 34606323 34606344 -132043952 + (GGGAGA)n Simple_repeat Simple_repeat 6 26 0 2 849 370 263 69 131 chrX 34606656 34606831 -132043465 - RSINE1 SINE B4 0 165 2 2 849 1611 57 0 0 chrX 34606915 34607107 -132043189 + B2_Mm1a SINE B2 1 192 -1 2 849 391 266 117 0 chrX 34607109 34607203 -132043093 - PB1D10 SINE Alu -12 105 1 2 849 352 284 35 0 chrX 34608070 34608186 -132042110 + PB1D9 SINE Alu 1 120 0 2 849 1394 100 16 0 chrX 34608222 34608412 -132041884 + B2_Mm2 SINE B2 1 193 -2 2 849 926 240 83 0 chrX 34608556 34608760 -132041536 - ID_B1 SINE B4 0 224 4 2 849 703 195 0 0 chrX 34608772 34608895 -132041401 + ID_B1 SINE B4 93 215 -9 2 849 2174 157 118 11 chrX 34608996 34609376 -132040920 - MTC LTR MaLR 0 421 1 3 849 279 0 0 0 chrX 34609547 34609578 -132040718 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 849 455 214 106 9 chrX 34610084 34610197 -132040099 + B1F SINE Alu 13 136 -13 3 849 209 30 0 57 chrX 34610368 34610403 -132039893 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 3 849 445 301 13 123 chrX 34610404 34610559 -132039737 - ID_B1 SINE B4 -11 213 76 3 849 566 312 84 44 chrX 34610667 34610942 -132039354 + B4A SINE B4 2 287 -5 3 849 186 167 0 0 chrX 34610953 34610989 -132039307 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 849 785 152 8 0 chrX 34611013 34611131 -132039165 + PB1D9 SINE Alu 2 120 0 3 849 1688 207 148 51 chrX 34611188 34611368 -132038928 - RMER5 LTR ERV1 0 534 340 3 849 1472 68 11 0 chrX 34611368 34611559 -132038737 + B2_Mm1t SINE B2 1 193 0 3 849 1688 207 148 51 chrX 34611559 34611852 -132038444 - RMER5 LTR ERV1 -195 339 15 3 849 1080 115 0 0 chrX 34611940 34612088 -132038208 + B1_Mur4 SINE Alu 2 149 -1 3 849 1227 41 7 0 chrX 34612112 34612258 -132038038 - B1_Mus2 SINE Alu 0 147 1 3 849 456 19 0 0 chrX 34612378 34612431 -132037865 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 849 1222 253 253 16 chrX 34612508 34612995 -132037301 - Lx8 LINE L1 -248 7225 6624 3 849 547 235 91 0 chrX 34613051 34613183 -132037113 - ID_B1 SINE B4 -1 223 80 3 849 602 208 100 0 chrX 34613220 34613340 -132036956 - B1_Mur1 SINE Alu -13 136 5 3 849 901 286 5 0 chrX 34613388 34613594 -132036702 - ID_B1 SINE B4 -17 207 1 3 849 283 250 56 0 chrX 34613646 34613718 -132036578 + ID_B1 SINE B4 82 157 -67 3 849 477 0 0 0 chrX 34613719 34613772 -132036524 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 849 204 287 0 33 chrX 34613778 34613868 -132036428 + (CAGAGA)n Simple_repeat Simple_repeat 4 90 0 3 849 38 81 0 0 chrX 34614188 34614275 -132036021 + AT_rich Low_complexity Low_complexity 1 87 0 3 849 733 157 85 57 chrX 34614275 34614451 -132035845 - B2_Mm2 SINE B2 -13 182 2 3 849 345 236 60 60 chrX 34614832 34614949 -132035347 - PB1D10 SINE Alu 0 117 1 3 849 344 318 165 8 chrX 34614979 34615112 -132035184 + RSINE1 SINE B4 12 165 0 3 849 1323 85 23 0 chrX 34615680 34615857 -132034439 + B2_Mm2 SINE B2 1 181 -14 3 849 252 146 0 40 chrX 34615889 34615939 -132034357 + B2_Mm2 SINE B2 47 94 -101 3 849 287 176 14 68 chrX 34616227 34616300 -132033996 - B3A SINE B2 -129 69 1 3 849 1208 68 0 0 chrX 34616341 34616489 -132033807 + B1_Mus1 SINE Alu 1 148 0 3 849 274 236 101 89 chrX 34616513 34616671 -132033625 - Lx8 LINE L1 -8 7465 7306 3 849 380 250 28 37 chrX 34616720 34616828 -132033468 - Lx8 LINE L1 -299 7174 7068 3 849 461 290 0 0 chrX 34616828 34616935 -132033361 + B1_Mur2 SINE Alu 2 108 -41 3 849 860 150 34 0 chrX 34617361 34617508 -132032788 + B2_Mm1t SINE B2 40 191 -2 3 849 854 87 0 0 chrX 34617507 34617622 -132032674 + B1_Mus1 SINE Alu 1 115 -33 3 849 471 221 64 29 chrX 34617622 34617642 -132032654 + ID_B1 SINE B4 83 222 -2 3 849 465 19 0 0 chrX 34618133 34618187 -132032109 + (GGA)n Simple_repeat Simple_repeat 2 55 0 3 849 373 265 154 41 chrX 34618356 34618525 -132031771 - MER20 DNA MER1_type 0 219 32 3 849 384 22 0 0 chrX 34618627 34618672 -132031624 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 3 849 1090 45 0 7 chrX 34618672 34618807 -132031489 - B1_Mus2 SINE Alu -13 134 1 3 849 670 241 21 7 chrX 34619073 34619231 -132031065 + ID_B1 SINE B4 82 244 -48 3 849 430 232 87 77 chrX 34619287 34619483 -132030813 + B3A SINE B2 1 198 0 3 849 1243 54 0 0 chrX 34619490 34619637 -132030659 + B1_Mus1 SINE Alu 2 148 0 3 849 665 232 25 55 chrX 34619663 34619864 -132030432 + B3A SINE B2 1 195 -3 3 849 334 267 60 43 chrX 34619869 34620015 -132030281 - PB1D7 SINE Alu -3 144 3 3 849 316 237 105 0 chrX 34620244 34620320 -132029976 + B1_Mur1 SINE Alu 29 112 -37 3 849 1715 21 0 0 chrX 34620565 34620757 -132029539 + B2_Mm1a SINE B2 1 192 -1 3 849 310 238 79 79 chrX 34620767 34620881 -132029415 - PB1D9 SINE Alu -6 114 1 3 849 425 231 104 49 chrX 34620901 34621065 -132029231 - B3A SINE B2 -24 174 2 3 849 749 85 16 71 chrX 34621129 34621256 -132029040 + PB1D9 SINE Alu 1 120 0 3 849 218 245 0 0 chrX 34621290 34621343 -132028953 - ID4 SINE ID -3 80 28 3 849 282 200 92 13 chrX 34621692 34621768 -132028528 + B3 SINE B2 1 82 -134 3 849 583 169 214 6 chrX 34621797 34621970 -132028326 - URR1B DNA MER1_type 0 225 17 3 849 219 254 72 29 chrX 34621977 34622046 -132028250 + ID4_ SINE ID 2 73 -10 3 849 938 89 67 0 chrX 34622072 34622207 -132028089 + B1_Mus1 SINE Alu 5 148 0 3 849 266 299 26 13 chrX 34622389 34622467 -132027829 - B3A SINE B2 -119 79 1 3 849 313 161 220 44 chrX 34623058 34623149 -132027147 + PB1D10 SINE Alu 11 117 0 3 849 229 275 29 0 chrX 34623751 34623820 -132026476 + RSINE1 SINE B4 45 115 -50 3 849 473 279 131 6 chrX 34625582 34625767 -132024529 + B3A SINE B2 1 202 -14 3 849 951 123 190 6 chrX 34625806 34625969 -132024327 + B2_Mm2 SINE B2 1 193 -2 3 849 801 140 46 8 chrX 34625972 34626102 -132024194 + B1_Mus1 SINE Alu 2 136 -12 3 849 554 194 55 31 chrX 34626213 34626341 -132023955 + B1_Mur1 SINE Alu 5 135 -14 3 849 213 39 0 0 chrX 34626343 34626369 -132023927 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 3 849 277 373 54 18 chrX 34626571 34626683 -132023613 + PB1D10 SINE Alu 1 116 -1 3 849 865 69 0 0 chrX 34627168 34627284 -132023012 + B1_Mus1 SINE Alu 1 116 -32 3 849 309 179 22 87 chrX 34627214 34627306 -132022990 + RLTR25A LTR ERVK 522 607 -496 3 849 241 231 77 0 chrX 34627297 34627362 -132022934 + PB1D7 SINE Alu 36 105 -15 3 849 293 0 0 26 chrX 34627363 34627401 -132022895 + (CATA)n Simple_repeat Simple_repeat 3 39 0 3 849 387 0 0 0 chrX 34627417 34627460 -132022836 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 3 849 1234 28 0 0 chrX 34627462 34627603 -132022693 - B1_Mm SINE Alu -6 141 1 3 849 296 22 22 0 chrX 34627641 34627687 -132022609 - B1_Mus2 SINE Alu -1 146 100 3 849 1047 91 7 0 chrX 34627707 34627850 -132022446 + B1_Mm SINE Alu 2 145 -2 3 849 280 289 13 26 chrX 34627966 34628044 -132022252 - ID4_ SINE ID -6 77 1 3 849 532 252 63 28 chrX 34628068 34628211 -132022085 - B1F SINE Alu -1 148 1 3 849 726 73 121 0 chrX 34628269 34628393 -132021903 + B1_Mur4 SINE Alu 11 149 -1 3 849 315 0 0 0 chrX 34628397 34628432 -132021864 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 849 217 232 107 0 chrX 34628534 34628590 -132021706 + RSINE1 SINE B4 92 153 -12 3 849 25 31 0 0 chrX 34628595 34628627 -132021669 + AT_rich Low_complexity Low_complexity 1 32 0 3 849 551 164 125 0 chrX 34628676 34628780 -132021516 - B1_Mur2 SINE Alu -10 139 23 3 849 255 118 258 124 chrX 34628698 34628795 -132021501 - MT2B LTR ERVL -334 267 158 3 849 226 312 53 21 chrX 34629162 34629257 -132021039 + L2c LINE L2 3289 3386 -1 3 849 1241 48 0 0 chrX 34629579 34629725 -132020571 + B1_Mus2 SINE Alu 2 147 0 3 849 228 67 0 0 chrX 34629725 34629755 -132020541 + (A)n Simple_repeat Simple_repeat 1 30 0 3 849 589 275 15 0 chrX 34630060 34630191 -132020105 - ID_B1 SINE B4 -8 216 84 3 849 690 249 91 20 chrX 34630678 34630875 -132019421 + B3 SINE B2 1 211 -5 3 849 1181 75 7 0 chrX 34630947 34631094 -132019202 - B1_Mus1 SINE Alu 0 148 1 3 849 560 266 7 47 chrX 34631231 34631381 -132018915 - B1F SINE Alu 0 149 6 3 849 366 234 0 38 chrX 34631560 34631640 -132018656 + ID4_ SINE ID 1 77 -6 3 849 216 86 0 0 chrX 34632807 34632842 -132017454 + (A)n Simple_repeat Simple_repeat 1 35 0 3 849 277 279 38 0 chrX 34632855 34632934 -132017362 - ID4 SINE ID 0 83 2 3 849 292 275 72 18 chrX 34632936 34633047 -132017249 - PB1D10 SINE Alu 0 117 1 3 849 748 201 7 14 chrX 34633055 34633196 -132017100 - B1_Mur2 SINE Alu -5 144 5 3 849 1430 65 22 0 chrX 34633262 34633446 -132016850 - B2_Mm2 SINE B2 -7 188 1 3 849 28 0 0 0 chrX 34633448 34633476 -132016820 + AT_rich Low_complexity Low_complexity 1 28 0 3 849 267 206 176 0 chrX 34633894 34633962 -132016334 + BC1_Mm scRNA scRNA 10 89 -63 3 849 281 219 62 0 chrX 34633971 34634035 -132016261 - PB1D9 SINE Alu -51 69 2 3 849 21 71 0 0 chrX 34634036 34634078 -132016218 + AT_rich Low_complexity Low_complexity 1 42 0 3 849 342 252 99 20 chrX 34634135 34634236 -132016060 - B3 SINE B2 -107 109 1 3 849 536 218 52 15 chrX 34634239 34634374 -132015922 - B1_Mur2 SINE Alu -3 146 7 3 849 303 215 118 0 chrX 34634417 34634510 -132015786 + MER58B DNA MER1_type 198 301 -40 3 849 28 48 0 0 chrX 34634535 34634577 -132015719 + AT_rich Low_complexity Low_complexity 1 42 0 3 849 992 134 7 0 chrX 34634905 34635054 -132015242 + B1_Mur4 SINE Alu 1 150 0 3 849 284 189 14 0 chrX 34635057 34635131 -132015165 + GA-rich Low_complexity Low_complexity 2 76 0 3 849 736 235 6 41 chrX 34635139 34635308 -132014988 + RSINE1 SINE B4 3 165 0 4 849 210 246 0 62 chrX 34635838 34635903 -132014393 + ID SINE ID 2 62 -162 4 849 200 225 0 0 chrX 34635918 34635958 -132014338 + A-rich Low_complexity Low_complexity 2 41 0 4 849 763 199 28 120 chrX 34636100 34636317 -132013979 + B3A SINE B2 2 198 0 4 849 1374 89 0 31 chrX 34636469 34636665 -132013631 - B2_Mm2 SINE B2 -4 191 2 4 849 464 184 47 37 chrX 34636670 34636777 -132013519 - PB1D10 SINE Alu -1 116 9 4 849 425 208 125 0 chrX 34637293 34637389 -132012907 - PB1D10 SINE Alu -9 108 1 4 849 216 0 0 0 chrX 34637435 34637459 -132012837 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 4 849 1271 40 0 0 chrX 34637464 34637612 -132012684 - B1_Mus1 SINE Alu 0 148 1 4 849 21 0 0 0 chrX 34639377 34639398 -132010898 + GC_rich Low_complexity Low_complexity 1 21 0 4 849 251 225 9 29 chrX 34639571 34639676 -132010620 + T-rich Low_complexity Low_complexity 5 107 0 4 849 318 224 33 56 chrX 34640340 34640430 -132009866 + ID_B1 SINE B4 136 223 -1 4 849 492 174 0 0 chrX 34640436 34640528 -132009768 + GA-rich Low_complexity Low_complexity 2 93 0 4 849 672 114 0 26 chrX 34640917 34641034 -132009262 + B1_Mur4 SINE Alu 36 149 -1 4 849 1422 38 0 0 chrX 34641147 34641330 -132008966 - B2_Mm1a SINE B2 -4 189 7 4 849 216 0 0 0 chrX 34641350 34641374 -132008922 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 4 849 482 254 55 16 chrX 34641374 34641502 -132008794 - ID_B1 SINE B4 -1 223 91 4 849 232 144 0 0 chrX 34641552 34641594 -132008702 - L1M5 LINE L1 -468 5656 5614 4 849 1258 40 0 0 chrX 34642449 34642597 -132007699 - B1_Mus1 SINE Alu 0 148 1 4 849 742 237 55 15 chrX 34642957 34643158 -132007138 + B3 SINE B2 3 211 -5 4 849 475 283 0 16 chrX 34643423 34643545 -132006751 + RSINE1 SINE B4 10 129 -36 4 849 1084 193 69 5 chrX 34643598 34643801 -132006495 + B3 SINE B2 1 216 0 4 849 897 142 41 57 chrX 34643935 34644129 -132006167 - B2_Mm2 SINE B2 -3 192 2 4 849 1200 68 0 0 chrX 34644713 34644861 -132005435 + B1_Mus1 SINE Alu 1 148 0 4 849 397 224 17 2 chrX 34645149 34645250 -132005046 + PB1D10 SINE Alu 10 110 -7 4 849 379 284 16 65 chrX 34645308 34645432 -132004864 - ID_B1 SINE B4 -8 216 99 4 849 233 303 101 0 chrX 34645474 34645563 -132004733 + PB1D10 SINE Alu 7 104 -13 4 849 670 213 32 79 chrX 34645600 34645737 -132004559 + L1MB7 LINE L1 6003 6141 -43 4 849 705 239 0 0 chrX 34645737 34645879 -132004417 + B1_Mus1 SINE Alu 2 143 -5 4 849 670 213 32 79 chrX 34645879 34645930 -132004366 + L1MB7 LINE L1 6142 6182 -2 4 849 263 259 47 12 chrX 34645933 34646019 -132004277 + L1MA9 LINE L1 6167 6255 -57 4 849 347 269 26 8 chrX 34646020 34646133 -132004163 + PB1D7 SINE Alu 33 145 -4 4 849 763 220 63 88 chrX 34646134 34646348 -132003948 + L1MB8 LINE L1 5902 6123 -55 4 849 444 69 14 0 chrX 34646348 34646420 -132003876 + L1Md_F2 LINE L1 6499 6571 -11 4 849 763 220 63 88 chrX 34646420 34646489 -132003807 + L1MB8 LINE L1 6124 6178 0 4 849 228 288 15 15 chrX 34646935 34647002 -132003294 + ID4_ SINE ID 4 70 -13 4 849 258 136 0 0 chrX 34647113 34647157 -132003139 + (A)n Simple_repeat Simple_repeat 1 44 0 4 849 324 70 0 0 chrX 34647147 34647190 -132003106 + (GGAA)n Simple_repeat Simple_repeat 3 45 0 4 849 942 205 39 29 chrX 34647229 34647435 -132002861 + B3 SINE B2 1 208 -8 4 849 462 209 11 0 chrX 34647491 34647582 -132002714 + RSINE1 SINE B4 4 95 -70 4 849 1140 58 0 0 chrX 34647713 34647851 -132002445 + B1_Mus2 SINE Alu 1 138 -9 4 849 188 34 0 33 chrX 34647859 34647889 -132002407 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 849 261 212 164 15 chrX 34648324 34648391 -132001905 - ID4_ SINE ID -4 79 3 4 849 310 215 49 25 chrX 34648766 34648847 -132001449 - B1F2 SINE Alu -55 94 12 4 849 22 0 0 0 chrX 34649119 34649141 -132001155 + AT_rich Low_complexity Low_complexity 1 22 0 4 849 1147 68 0 7 chrX 34650735 34650884 -131999412 - B1_Mus1 SINE Alu 0 148 1 4 849 318 309 31 31 chrX 34650960 34651087 -131999209 + B1F2 SINE Alu 21 147 -2 4 849 278 250 38 0 chrX 34651337 34651416 -131998880 + L1M5 LINE L1 5733 5814 -477 4 849 237 246 33 0 chrX 34651461 34651522 -131998774 + PB1 SINE Alu 1 63 -64 4 849 214 250 0 0 chrX 34651550 34651594 -131998702 + GA-rich Low_complexity Low_complexity 2 45 0 4 849 288 0 0 0 chrX 34652096 34652128 -131998168 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 4 849 693 163 61 23 chrX 34652135 34652267 -131998029 - B1_Mur4 SINE Alu -12 138 2 4 849 4258 167 38 25 chrX 34652327 34653144 -131997152 + Lx5 LINE L1 6220 7047 -3 4 849 22 0 0 30 chrX 34653164 34653178 -131997118 + AT_rich Low_complexity Low_complexity 1 14 0 4 849 866 152 0 40 chrX 34653178 34653329 -131996967 + B1_Mus1 SINE Alu 1 145 -3 4 849 22 0 0 30 chrX 34653329 34653347 -131996949 + AT_rich Low_complexity Low_complexity 1 18 0 4 849 660 132 0 0 chrX 34653817 34653923 -131996373 + (GAAA)n Simple_repeat Simple_repeat 3 108 0 4 849 1140 96 0 0 chrX 34654040 34654186 -131996110 + B1_Mus1 SINE Alu 1 146 -2 4 849 302 98 0 19 chrX 34654273 34654325 -131995971 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 849 376 267 0 11 chrX 34654375 34654466 -131995830 - RSINE1 SINE B4 -73 92 3 4 849 743 289 5 0 chrX 34654627 34654835 -131995461 - B3 SINE B2 -5 211 3 4 849 1171 74 117 0 chrX 34654844 34655006 -131995290 - B2_Mm2 SINE B2 -14 181 1 4 849 1712 21 0 0 chrX 34655098 34655287 -131995009 - B2_Mm1a SINE B2 -3 190 2 4 849 382 115 0 89 chrX 34655347 34655538 -131994758 + GA-rich Low_complexity Low_complexity 3 176 0 4 849 533 103 0 76 chrX 34655551 34655816 -131994480 + GA-rich Low_complexity Low_complexity 1 244 0 4 849 597 83 0 77 chrX 34655828 34656023 -131994273 + GA-rich Low_complexity Low_complexity 1 180 0 4 849 467 94 0 86 chrX 34656069 34656256 -131994040 + GA-rich Low_complexity Low_complexity 3 173 0 4 849 340 99 0 105 chrX 34656297 34656478 -131993818 + GA-rich Low_complexity Low_complexity 3 164 0 4 849 480 95 0 82 chrX 34656489 34656672 -131993624 + GA-rich Low_complexity Low_complexity 3 170 0 4 849 512 99 0 77 chrX 34656683 34656947 -131993349 + GA-rich Low_complexity Low_complexity 1 243 0 4 849 494 78 0 101 chrX 34657015 34657214 -131993082 + GA-rich Low_complexity Low_complexity 1 179 0 4 849 384 59 0 0 chrX 34657238 34657289 -131993007 + (CGGGGG)n Simple_repeat Simple_repeat 5 55 0 4 849 485 209 0 79 chrX 34657290 34657404 -131992892 + B1_Mm SINE Alu 42 146 -1 4 849 282 116 0 0 chrX 34657436 34657479 -131992817 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 849 295 207 59 35 chrX 34657523 34657608 -131992688 - RSINE1 SINE B4 -68 97 11 4 849 317 264 69 0 chrX 34657778 34657865 -131992431 - RSINE1 SINE B4 -70 95 3 4 849 202 239 0 0 chrX 34657865 34657911 -131992385 + T-rich Low_complexity Low_complexity 1 46 0 4 849 207 0 0 0 chrX 34657911 34657934 -131992362 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 849 525 219 9 0 chrX 34657939 34658044 -131992252 - PB1D7 SINE Alu -5 115 10 4 849 4150 205 47 38 chrX 34658086 34658226 -131992070 + Lx6 LINE L1 6255 6394 -1066 4 849 414 0 0 0 chrX 34658226 34658272 -131992024 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 849 4150 205 47 38 chrX 34658272 34658540 -131991756 + Lx6 LINE L1 6395 6695 -765 4 849 1252 47 0 0 chrX 34658540 34658688 -131991608 + B1_Mus1 SINE Alu 1 148 0 4 849 4150 205 47 38 chrX 34658688 34658700 -131991596 + Lx6 LINE L1 6696 6696 -764 4 849 513 0 0 0 chrX 34658700 34658757 -131991539 + (GA)n Simple_repeat Simple_repeat 2 58 0 4 849 4150 205 47 38 chrX 34658757 34659221 -131991075 + Lx6 LINE L1 6696 7148 -312 4 849 581 13 0 0 chrX 34659233 34659309 -131990987 - BC1_Mm scRNA scRNA -76 76 1 4 849 1408 229 16 3 chrX 34659309 34659620 -131990676 + Lx6 LINE L1 7135 7449 -11 4 849 668 228 20 14 chrX 34659632 34659779 -131990517 + B1_Mur1 SINE Alu 1 148 -1 4 849 3924 141 76 8 chrX 34659787 34660422 -131989874 - RLTR33 LTR ERVK 0 678 1 4 849 1057 176 42 0 chrX 34660654 34660847 -131989449 - RMER15 LTR ERVL -2 573 373 4 849 448 179 28 28 chrX 34660864 34660973 -131989323 - RMER15 LTR ERVL -445 130 22 4 849 262 214 0 0 chrX 34660986 34661042 -131989254 - URR1B DNA MER1_type 0 225 170 4 849 385 76 0 29 chrX 34661042 34661110 -131989186 + (TTTTTG)n Simple_repeat Simple_repeat 6 71 0 4 849 1207 54 0 13 chrX 34661110 34661260 -131989036 - B1_Mus1 SINE Alu 0 148 1 4 849 1027 156 0 75 chrX 34661260 34661302 -131988994 - URR1B DNA MER1_type -40 185 156 4 849 1598 36 0 45 chrX 34661302 34661504 -131988792 - B2_Mm1a SINE B2 0 193 1 4 849 1027 156 0 75 chrX 34661504 34661662 -131988634 - URR1B DNA MER1_type -70 155 1 4 849 312 200 0 44 chrX 34661672 34661740 -131988556 - RMER15 LTR ERVL -510 65 1 4 849 565 235 19 51 chrX 34661751 34661908 -131988388 + ORR1B1 LTR MaLR 41 192 -202 4 849 4565 164 37 30 chrX 34661875 34662722 -131987574 - RMER13A LTR ERVK -7 853 1 4 849 1217 114 25 5 chrX 34662727 34662929 -131987367 + ORR1A4 LTR MaLR 116 321 -8 4 849 1715 26 0 0 chrX 34663615 34663807 -131986489 - B2_Mm1t SINE B2 0 193 2 4 849 334 352 34 48 chrX 34664204 34664413 -131985883 - RLTR25A LTR ERVK -895 208 3 4 849 798 232 340 0 chrX 34664422 34664692 -131985604 + Lx9 LINE L1 6431 6792 -852 4 849 2463 198 57 86 chrX 34664870 34665555 -131984741 + Lx9 LINE L1 6796 7460 -184 4 849 1253 143 46 5 chrX 34665575 34665793 -131984503 + RLTR14 LTR ERV1 3 229 -153 4 849 387 0 0 0 chrX 34665794 34665837 -131984459 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 849 1151 56 0 0 chrX 34665847 34665989 -131984307 - B1_Mus1 SINE Alu -2 146 5 4 849 344 183 0 0 chrX 34665999 34666059 -131984237 + RLTR14 LTR ERV1 323 382 0 4 849 367 230 70 16 chrX 34666073 34666201 -131984095 + Lx9 LINE L1 7510 7644 0 4 849 219 125 0 0 chrX 34666843 34666883 -131983413 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 4 849 244 253 114 0 chrX 34668015 34668094 -131982202 + ID_B1 SINE B4 129 216 -8 4 849 232 293 0 96 chrX 34668086 34668110 -131982186 + B4 SINE B4 66 81 -211 4 849 462 250 37 52 chrX 34668110 34668245 -131982051 + B1F SINE Alu 1 133 -16 4 849 182 259 69 0 chrX 34668521 34668579 -131981717 + MIRc SINE MIR 83 144 -124 4 849 256 237 26 0 chrX 34668586 34668662 -131981634 + ID2 SINE ID 1 78 -5 4 849 244 340 51 10 chrX 34668796 34668894 -131981402 + PB1D9 SINE Alu 18 119 -1 4 849 1465 70 16 0 chrX 34669255 34669441 -131980855 - B2_Mm2 SINE B2 -5 190 2 4 849 25 0 0 0 chrX 34669513 34669538 -131980758 + AT_rich Low_complexity Low_complexity 1 25 0 5 849 675 197 37 15 chrX 34669550 34669684 -131980612 - B1_Mur2 SINE Alu -10 139 3 5 849 635 258 25 64 chrX 34669698 34669901 -131980395 - B3A SINE B2 -2 196 2 5 849 541 67 55 11 chrX 34670401 34670492 -131979804 - B1_Mur3 SINE Alu -13 136 42 5 849 234 152 0 0 chrX 34670494 34670553 -131979743 + CT-rich Low_complexity Low_complexity 4 62 0 5 849 342 167 0 32 chrX 34670664 34670726 -131979570 - B1_Mur4 SINE Alu -90 60 1 5 849 480 182 116 1 chrX 34670777 34670879 -131979417 + PB1 SINE Alu 22 128 -21 5 849 945 172 13 0 chrX 34671148 34671305 -131978991 - RSINE1 SINE B4 -4 161 3 5 849 198 0 0 0 chrX 34671478 34671500 -131978796 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 5 849 482 265 14 29 chrX 34671500 34671640 -131978656 - B1F SINE Alu -11 138 1 5 849 26 30 0 0 chrX 34671698 34671731 -131978565 + AT_rich Low_complexity Low_complexity 1 33 0 5 849 23 54 0 0 chrX 34671992 34672029 -131978267 + AT_rich Low_complexity Low_complexity 1 37 0 5 849 505 279 18 76 chrX 34672054 34672225 -131978071 - RSINE1 SINE B4 -2 163 3 5 849 480 258 72 1 chrX 34672227 34672365 -131977931 - B4A SINE B4 -64 228 82 5 849 1154 86 103 0 chrX 34672365 34672539 -131977757 - B2_Mm1a SINE B2 0 193 2 5 849 475 321 65 88 chrX 34672549 34672967 -131977329 - L1MA5A LINE L1 -399 5898 5474 5 849 3894 65 99 0 chrX 34672967 34673502 -131976794 - L1_Mus3 LINE L1 -6 6632 6045 5 849 475 321 65 88 chrX 34673502 34673608 -131976688 - L1MA5A LINE L1 -824 5473 5386 5 849 345 111 0 0 chrX 34673612 34673666 -131976630 - B3 SINE B2 -162 54 1 5 849 412 241 152 22 chrX 34673669 34673847 -131976449 - L1_Rod LINE L1 -641 5206 5006 5 849 787 230 67 10 chrX 34673865 34674058 -131976238 - B3 SINE B2 -11 205 2 5 849 520 82 62 3 chrX 34674137 34674239 -131976057 + B1_Mus2 SINE Alu 2 147 0 5 849 26 30 0 0 chrX 34674313 34674346 -131975950 + AT_rich Low_complexity Low_complexity 1 33 0 5 849 210 156 0 0 chrX 34674572 34674604 -131975692 - PB1D9 SINE Alu -88 32 1 5 849 1251 41 0 0 chrX 34674782 34674929 -131975367 - B1_Mus2 SINE Alu 0 147 1 5 849 763 219 14 7 chrX 34675039 34675186 -131975110 - B1_Mur1 SINE Alu -1 148 1 5 849 451 286 29 29 chrX 34675221 34675358 -131974938 - B3A SINE B2 -24 174 38 5 849 760 276 25 5 chrX 34675374 34675571 -131974725 + ID_B1 SINE B4 20 220 -4 5 849 274 79 0 0 chrX 34675924 34675962 -131974334 - PB1D9 SINE Alu -82 38 1 5 849 583 257 128 5 chrX 34676157 34676345 -131973951 + B3 SINE B2 1 211 -5 5 849 190 95 48 0 chrX 34676347 34676389 -131973907 + (TAA)n Simple_repeat Simple_repeat 1 44 0 5 849 916 214 0 6 chrX 34676948 34677127 -131973169 - B3 SINE B2 -38 178 1 5 849 192 77 0 0 chrX 34677190 34677216 -131973080 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 5 849 7635 124 32 19 chrX 34677218 34678481 -131971815 - Lx4B LINE L1 -1 7057 5779 5 849 681 288 0 18 chrX 34678711 34678874 -131971422 - RSINE1 SINE B4 0 165 6 5 849 500 265 38 44 chrX 34679329 34679487 -131970809 - RSINE1 SINE B4 -6 159 3 5 849 392 0 21 0 chrX 34679788 34679836 -131970460 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 849 200 59 29 0 chrX 34679956 34679990 -131970306 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 849 1229 41 0 0 chrX 34679997 34680144 -131970152 - B1_Mus2 SINE Alu 0 147 1 5 849 250 272 0 11 chrX 34680553 34680646 -131969650 + T-rich Low_complexity Low_complexity 2 93 0 5 849 771 256 5 35 chrX 34680651 34680853 -131969443 - B3A SINE B2 0 198 3 5 849 528 311 0 0 chrX 34680861 34680993 -131969303 - ID_B1 SINE B4 -7 217 86 5 849 649 187 234 19 chrX 34681074 34681232 -131969064 - B2_Mm2 SINE B2 -3 192 1 5 849 750 193 197 39 chrX 34681359 34681537 -131968759 + B3 SINE B2 1 206 -10 5 849 359 275 9 27 chrX 34682069 34682181 -131968115 + ID_B1 SINE B4 87 196 -28 5 849 427 260 7 93 chrX 34682202 34682342 -131967954 - RSINE1 SINE B4 -35 130 3 5 849 917 26 8 0 chrX 34682522 34682639 -131967657 - B2_Mm2 SINE B2 -76 119 2 5 849 369 0 0 0 chrX 34683158 34683199 -131967097 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 849 2205 98 6 0 chrX 34684056 34684374 -131965922 - ORR1A2 LTR MaLR 0 327 8 5 849 424 231 50 185 chrX 34684356 34684435 -131965861 - ORR1A2 LTR MaLR -141 243 171 5 849 867 118 0 0 chrX 34684435 34684570 -131965726 + (GAA)n Simple_repeat Simple_repeat 3 137 0 5 849 525 215 21 98 chrX 34684570 34684771 -131965525 - ORR1A2 LTR MaLR -214 170 1 5 849 257 234 147 88 chrX 34684774 34684910 -131965386 + L1M2 LINE L1 5696 5839 -461 5 849 213 39 0 0 chrX 34684910 34684936 -131965360 + (A)n Simple_repeat Simple_repeat 1 26 0 5 849 25 51 0 0 chrX 34684956 34684995 -131965301 + AT_rich Low_complexity Low_complexity 1 39 0 5 849 805 163 187 22 chrX 34685086 34685268 -131965028 + B3 SINE B2 1 212 -4 5 849 898 178 7 0 chrX 34685500 34685646 -131964650 + B1_Mus2 SINE Alu 1 147 0 5 849 1122 88 0 0 chrX 34685651 34685798 -131964498 + B1_Mus2 SINE Alu 1 147 0 5 849 339 281 97 28 chrX 34685842 34686058 -131964238 + L1M5 LINE L1 4483 4713 -1433 5 849 207 0 0 0 chrX 34686300 34686323 -131963973 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 5 849 236 271 75 20 chrX 34686350 34686497 -131963799 + L1M5 LINE L1 5151 5305 -841 5 849 415 352 51 34 chrX 34686558 34686852 -131963444 + L1M5 LINE L1 5415 5713 -527 5 849 500 233 26 0 chrX 34687370 34687486 -131962810 + B1_Mur1 SINE Alu 23 141 -8 5 849 445 248 75 62 chrX 34688042 34688060 -131962236 - B1F1 SINE Alu 0 149 3 5 849 590 221 39 0 chrX 34688060 34688187 -131962109 - ID_B1 SINE B4 -9 215 84 5 849 303 194 111 0 chrX 34688760 34688832 -131961464 + ID4 SINE ID 3 82 -1 5 849 596 174 0 0 chrX 34689049 34689158 -131961138 - PB1D9 SINE Alu -6 114 6 5 849 333 100 0 0 chrX 34689863 34689913 -131960383 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 849 1029 78 0 0 chrX 34690937 34691079 -131959217 - B1_Mus2 SINE Alu 0 147 6 5 849 412 198 116 0 chrX 34691285 34691371 -131958925 - PB1D7 SINE Alu -8 112 17 5 849 344 260 0 0 chrX 34691439 34691512 -131958784 + ID4_ SINE ID 2 74 -9 5 849 323 243 36 45 chrX 34692336 34692448 -131957848 - PB1 SINE Alu 0 127 17 5 849 546 192 87 8 chrX 34692474 34692600 -131957696 - ID_B1 SINE B4 -7 217 82 5 849 686 218 49 0 chrX 34692642 34692784 -131957512 + B1_Mur4 SINE Alu 2 150 0 5 849 421 284 91 58 chrX 34692785 34693028 -131957268 - ORR1E LTR MaLR -46 313 63 5 849 281 336 8 42 chrX 34693046 34693164 -131957132 - PB1D7 SINE Alu -6 114 1 5 849 1408 92 11 0 chrX 34693173 34693358 -131956938 - B2_Mm1t SINE B2 -6 187 1 5 849 1194 48 0 7 chrX 34693380 34693528 -131956768 - B1_Mus2 SINE Alu 0 147 1 5 849 201 74 0 0 chrX 34693613 34693640 -131956656 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 849 620 258 0 0 chrX 34693649 34693777 -131956519 - B3A SINE B2 -38 160 33 5 849 1115 184 43 24 chrX 34693796 34694007 -131956289 - B3 SINE B2 -1 215 1 5 849 423 0 0 0 chrX 34694063 34694110 -131956186 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 5 849 727 180 22 0 chrX 34694112 34694251 -131956045 - B1_Mur4 SINE Alu -5 145 4 5 849 1235 35 7 0 chrX 34694507 34694651 -131955645 + B1_Mus1 SINE Alu 4 148 0 5 849 714 170 89 0 chrX 34694683 34694818 -131955478 + B1_Mus1 SINE Alu 1 147 -1 5 849 1603 42 0 0 chrX 34694975 34695164 -131955132 + B2_Mm1t SINE B2 2 190 -3 5 849 396 241 144 96 chrX 34695188 34695376 -131954920 + B3A SINE B2 1 197 -1 5 849 311 280 13 0 chrX 34695613 34695688 -131954608 + ID4_ SINE ID 2 77 -6 5 849 1072 169 56 10 chrX 34695870 34696067 -131954229 - B3 SINE B2 -2 214 9 5 849 254 29 29 0 chrX 34696084 34696119 -131954177 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 849 577 247 60 27 chrX 34696121 34696271 -131954025 - B3A SINE B2 -42 156 2 5 849 314 286 107 0 chrX 34696376 34696460 -131953836 - PB1 SINE Alu -21 106 14 5 849 417 335 116 11 chrX 34696464 34696748 -131953548 - L2 LINE L2 -1084 2335 2022 5 849 320 279 0 0 chrX 34696753 34696821 -131953475 + ID4_ SINE ID 4 71 -12 5 849 365 300 73 67 chrX 34697743 34697893 -131952403 + RSINE1 SINE B4 6 156 -9 5 849 321 118 116 105 chrX 34697987 34698082 -131952214 + B2_Mm2 SINE B2 81 176 -19 5 849 383 296 142 5 chrX 34698650 34698840 -131951456 - B4A SINE B4 -8 284 69 5 849 738 277 30 5 chrX 34698912 34699115 -131951181 - ID_B1 SINE B4 -15 209 2 5 849 339 195 168 140 chrX 34699231 34699374 -131950922 - PB1 SINE Alu -1 148 2 5 849 797 232 82 24 chrX 34699599 34699807 -131950489 - ID_B1 SINE B4 0 224 5 5 849 407 228 47 10 chrX 34699812 34699923 -131950373 - PB1D10 SINE Alu 0 117 3 5 849 361 265 29 0 chrX 34700516 34700618 -131949678 + ID_B1 SINE B4 87 191 -33 5 849 434 310 191 4 chrX 34700708 34701169 -131949127 - L2a LINE L2 0 3426 2877 5 849 713 233 14 14 chrX 34702063 34702211 -131948085 + B1_Mur1 SINE Alu 2 149 0 5 849 272 244 194 82 chrX 34702213 34702334 -131947962 + B2_Mm2 SINE B2 2 145 -50 5 849 510 99 0 32 chrX 34702334 34702428 -131947868 + (CA)n Simple_repeat Simple_repeat 2 92 0 6 849 272 244 194 82 chrX 34702428 34702476 -131947820 + B2_Mm2 SINE B2 146 190 -5 5 849 333 0 0 0 chrX 34704093 34704130 -131946166 + (A)n Simple_repeat Simple_repeat 1 37 0 6 849 762 246 12 6 chrX 34704223 34704391 -131945905 - B3 SINE B2 -11 205 37 6 849 223 67 43 22 chrX 34704398 34704444 -131945852 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 6 849 454 295 0 80 chrX 34704767 34704918 -131945378 - B3A SINE B2 -5 193 55 6 849 562 173 6 0 chrX 34704955 34705068 -131945228 - B1_Mus2 SINE Alu 0 150 33 6 849 517 295 0 15 chrX 34705471 34705602 -131944694 + B1F1 SINE Alu 1 129 -20 6 849 203 105 50 50 chrX 34705611 34705671 -131944625 + (CAAAC)n Simple_repeat Simple_repeat 5 64 0 6 849 506 266 41 41 chrX 34705676 34705821 -131944475 + ID_B1 SINE B4 64 208 -16 6 849 564 87 0 0 chrX 34705821 34705913 -131944383 + (GA)n Simple_repeat Simple_repeat 1 92 0 6 849 460 231 25 85 chrX 34705920 34706038 -131944258 + PB1D10 SINE Alu 1 111 -6 6 849 677 184 0 9 chrX 34706049 34706164 -131944132 + PB1D9 SINE Alu 2 115 -5 6 849 607 184 463 0 chrX 34706168 34706315 -131943981 + B3 SINE B2 2 216 0 6 849 1175 54 7 0 chrX 34706383 34706530 -131943766 - B1_Mus1 SINE Alu 0 148 1 6 849 1176 8 0 0 chrX 34706781 34706914 -131943382 + (TTTC)n Simple_repeat Simple_repeat 4 136 0 6 849 411 235 118 34 chrX 34706918 34707037 -131943259 - B1_Mur1 SINE Alu -19 130 2 6 849 22 0 0 0 chrX 34707104 34707126 -131943170 + AT_rich Low_complexity Low_complexity 1 22 0 6 849 493 251 2 36 chrX 34707565 34707731 -131942565 - B3A SINE B2 0 216 65 6 849 500 218 118 15 chrX 34707774 34707898 -131942398 + B1_Mur3 SINE Alu 1 140 -9 6 849 321 26 0 0 chrX 34707898 34707936 -131942360 + (CAAG)n Simple_repeat Simple_repeat 2 39 0 6 849 337 264 252 9 chrX 34708059 34708170 -131942126 - RSINE1 SINE B4 -27 138 1 6 849 666 118 0 0 chrX 34708528 34708630 -131941666 + (GGGA)n Simple_repeat Simple_repeat 3 104 0 6 849 309 219 14 14 chrX 34709405 34709479 -131940817 - PB1D10 SINE Alu -10 107 34 6 849 906 116 0 0 chrX 34709507 34709654 -131940642 + (TCCC)n Simple_repeat Simple_repeat 4 150 0 6 849 3552 70 13 6 chrX 34709656 34710131 -131940165 + L1_Mus3 LINE L1 6154 6631 -7 6 849 25 31 0 0 chrX 34710151 34710183 -131940113 + AT_rich Low_complexity Low_complexity 1 32 0 6 849 22 0 0 0 chrX 34710315 34710337 -131939959 + AT_rich Low_complexity Low_complexity 1 22 0 6 849 341 307 253 11 chrX 34710348 34710526 -131939770 - ID_B1 SINE B4 -2 222 2 6 849 182 83 0 53 chrX 34710552 34710590 -131939706 + (TTG)n Simple_repeat Simple_repeat 1 36 0 6 849 603 171 0 25 chrX 34710603 34710723 -131939573 - B1_Mur1 SINE Alu -2 147 31 6 849 980 246 0 18 chrX 34710870 34711089 -131939207 - B3 SINE B2 0 216 2 6 849 916 123 25 28 chrX 34711131 34711336 -131938960 - B2_Mm2 SINE B2 -10 206 1 6 849 265 257 14 41 chrX 34711763 34711836 -131938460 + PB1D7 SINE Alu 1 71 -49 6 849 314 174 19 119 chrX 34711885 34711991 -131938305 + ORR1D2 LTR MaLR 1 96 -278 6 849 4247 162 53 57 chrX 34712000 34712884 -131937412 + RMER19B LTR ERVK 6 886 -16 6 849 1403 77 11 5 chrX 34712886 34713070 -131937226 + B2_Mm2 SINE B2 2 186 -9 6 849 501 121 72 0 chrX 34713159 34713242 -131937054 + B2_Mm2 SINE B2 57 145 -50 6 849 792 0 0 0 chrX 34713266 34713354 -131936942 + (TAGA)n Simple_repeat Simple_repeat 4 91 0 6 849 293 242 15 0 chrX 34713356 34713422 -131936874 - B3A SINE B2 -128 70 4 6 849 200 330 16 25 chrX 34713892 34714013 -131936283 + (CAGAG)n Simple_repeat Simple_repeat 1 120 0 6 849 284 303 5 84 chrX 34715125 34715316 -131934980 + (CAGAG)n Simple_repeat Simple_repeat 4 179 0 6 849 403 318 0 13 chrX 34715763 34715916 -131934380 + (CAGAG)n Simple_repeat Simple_repeat 4 154 0 6 849 248 285 5 113 chrX 34716767 34716961 -131933335 + (CAGAG)n Simple_repeat Simple_repeat 2 174 0 6 849 344 219 70 67 chrX 34718099 34718238 -131932058 - MTD LTR MaLR -16 403 249 6 849 4332 131 77 53 chrX 34718239 34718410 -131931886 - RMER12B LTR ERVK -1 1403 1206 6 849 1284 44 0 0 chrX 34718410 34718569 -131931727 + (CA)n Simple_repeat Simple_repeat 2 160 0 6 849 4332 131 77 53 chrX 34718569 34719297 -131930999 - RMER12B LTR ERVK -199 1205 483 6 849 817 124 0 0 chrX 34719329 34719450 -131930846 + RMER19B LTR ERVK 84 204 -698 6 849 2593 144 141 23 chrX 34719470 34719989 -131930307 + RMER19B LTR ERVK 304 885 -17 6 849 1607 37 16 0 chrX 34719989 34720179 -131930117 + B2_Mm1a SINE B2 1 193 0 6 849 1086 212 8 56 chrX 34720217 34720467 -131929829 - RMER12B LTR ERVK -1166 238 1 6 849 831 238 79 18 chrX 34720467 34720694 -131929602 - MTD LTR MaLR -161 258 18 6 849 1243 112 153 0 chrX 34720905 34721101 -131929195 + URR1A DNA MER1_type 1 226 0 6 849 357 167 0 0 chrX 34721493 34721553 -131928743 - ID4 SINE ID -19 64 5 6 849 876 220 14 54 chrX 34721767 34721988 -131928308 - B3 SINE B2 -1 215 4 6 849 488 223 125 26 chrX 34722046 34722198 -131928098 - B3A SINE B2 -30 168 2 6 849 225 130 0 42 chrX 34722220 34722268 -131928028 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 6 849 974 185 60 5 chrX 34722352 34722553 -131927743 - B3 SINE B2 -4 212 1 6 849 297 334 6 17 chrX 34722893 34723047 -131927249 + RMER12B LTR ERVK 14 165 -1407 6 849 486 136 0 0 chrX 34723058 34723139 -131927157 + (TTTC)n Simple_repeat Simple_repeat 2 82 0 6 849 1628 43 0 0 chrX 34723281 34723468 -131926828 + B2_Mm1t SINE B2 2 188 -5 6 849 214 65 0 0 chrX 34723999 34724030 -131926266 + B3A SINE B2 2 32 -166 6 849 370 263 28 50 chrX 34724033 34724221 -131926075 + RLTR21 LTR ERVK 729 943 -461 6 849 639 95 191 0 chrX 34724279 34724384 -131925912 + B2_Mm2 SINE B2 1 125 -70 6 849 4240 293 51 47 chrX 34724423 34726383 -131923913 + MMERGLN-int LTR ERV1 712 2679 -4877 6 849 736 85 0 0 chrX 34726645 34726751 -131923545 + B2_Mm2 SINE B2 2 107 -88 6 849 1593 194 109 8 chrX 34727021 34727389 -131922907 + MTC LTR MaLR 9 413 -8 6 849 23 68 0 0 chrX 34727565 34727609 -131922687 + AT_rich Low_complexity Low_complexity 1 44 0 6 849 490 250 20 0 chrX 34727942 34728042 -131922254 - PB1D9 SINE Alu -13 107 6 6 849 465 219 167 0 chrX 34728074 34728188 -131922108 - ID_B1 SINE B4 -7 217 85 6 849 255 293 6 214 chrX 34728546 34728619 -131921677 + ID_B1 SINE B4 81 220 -3 6 849 367 301 0 10 chrX 34728619 34728723 -131921573 + B1F1 SINE Alu 42 144 -5 6 849 223 295 8 76 chrX 34729081 34729213 -131921083 + RSINE1 SINE B4 43 165 0 6 849 438 255 9 19 chrX 34729246 34729354 -131920942 - PB1D10 SINE Alu -1 116 10 6 849 232 214 0 0 chrX 34729384 34729426 -131920870 + RSINE1 SINE B4 100 141 -24 6 849 680 215 15 0 chrX 34729469 34729604 -131920692 + B1_Mur1 SINE Alu 3 139 -10 6 849 351 96 0 0 chrX 34729711 34729763 -131920533 + (TA)n Simple_repeat Simple_repeat 1 52 0 6 849 325 348 15 80 chrX 34730043 34730243 -131920053 + B3A SINE B2 1 187 -11 6 849 213 211 0 17 chrX 34730424 34730482 -131919814 - B1_Mur4 SINE Alu 0 150 94 6 849 413 277 40 13 chrX 34730488 34730638 -131919658 + B3A SINE B2 39 192 -6 6 849 316 256 11 11 chrX 34732857 34732944 -131917352 + MER3 DNA MER1_type 20 106 -103 6 849 1278 27 0 0 chrX 34733333 34733480 -131916816 + B1_Mm SINE Alu 1 147 0 6 849 328 257 94 34 chrX 34733731 34733848 -131916448 + RSINE1 SINE B4 4 127 -38 6 849 22 0 0 0 chrX 34733861 34733883 -131916413 + AT_rich Low_complexity Low_complexity 1 22 0 6 106 1104 92 110 0 chrX 34734035 34734198 -131916098 + B2_Mm1t SINE B2 1 181 -12 6 850 337 127 0 0 chrX 34734243 34734298 -131915998 + B2_Mm2 SINE B2 47 101 -94 6 850 235 143 0 0 chrX 34734297 34734339 -131915957 + B2_Mm1t SINE B2 138 179 -14 6 850 381 288 184 0 chrX 34734339 34734464 -131915832 - B3A SINE B2 -50 148 1 6 850 2691 16 42 0 chrX 34734665 34734974 -131915322 - RLTRETN_Mm LTR ERVK 0 322 1 6 850 407 314 70 21 chrX 34735009 34735152 -131915144 + B4A SINE B4 3 152 -140 6 850 263 297 0 13 chrX 34735166 34735241 -131915055 + B4A SINE B4 8 81 -211 6 850 318 26 0 0 chrX 34735241 34735280 -131915016 + (CAA)n Simple_repeat Simple_repeat 2 40 0 6 850 419 195 61 11 chrX 34735443 34735560 -131914736 + B3A SINE B2 4 139 -59 6 850 313 111 0 0 chrX 34735625 34735670 -131914626 + HAL1-3A_ME LINE L1 1976 2020 -838 6 850 288 0 0 0 chrX 34735732 34735764 -131914532 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 6 850 227 219 108 12 chrX 34735788 34735871 -131914425 + RSINE1 SINE B4 5 95 -70 6 850 315 0 0 0 chrX 34735995 34736030 -131914266 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 850 31 44 0 0 chrX 34736092 34736137 -131914159 + AT_rich Low_complexity Low_complexity 1 45 0 6 850 947 245 59 49 chrX 34736137 34736403 -131913893 + B4 SINE B4 3 276 -16 6 850 405 0 0 0 chrX 34736403 34736448 -131913848 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 850 947 245 59 49 chrX 34736448 34736468 -131913828 + B4 SINE B4 277 292 0 6 850 806 209 94 25 chrX 34736482 34736521 -131913775 - B3 SINE B2 0 216 183 6 850 366 23 0 0 chrX 34736521 34736564 -131913732 + (TATG)n Simple_repeat Simple_repeat 4 46 0 6 850 806 209 94 25 chrX 34736564 34736725 -131913571 - B3 SINE B2 -34 182 3 6 850 394 322 8 0 chrX 34736756 34736877 -131913419 + RSINE1 SINE B4 3 124 -41 6 850 315 0 0 0 chrX 34736892 34736927 -131913369 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 850 26 30 0 0 chrX 34737092 34737125 -131913171 + AT_rich Low_complexity Low_complexity 1 33 0 7 850 452 333 28 0 chrX 34737130 34737274 -131913022 - RSINE1 SINE B4 -14 151 4 7 850 483 279 10 28 chrX 34737530 34737674 -131912622 - B3 SINE B2 -6 192 53 7 850 2209 183 56 56 chrX 34737709 34738108 -131912188 + RLTR14-int LTR ERV1 3926 4331 -986 7 850 348 24 0 0 chrX 34738108 34738149 -131912147 + (TA)n Simple_repeat Simple_repeat 1 41 0 7 850 2209 183 56 56 chrX 34738149 34738264 -131912032 + RLTR14-int LTR ERV1 4332 4439 -878 7 850 1931 155 69 69 chrX 34738445 34738882 -131911414 + RLTR26 LTR ERVK 1 437 -205 7 850 431 134 153 10 chrX 34738918 34739016 -131911280 + RLTR26 LTR ERVK 531 642 0 7 850 277 159 0 0 chrX 34739072 34739116 -131911180 + RLTR14-int LTR ERV1 4488 4531 -786 7 850 1178 76 122 0 chrX 34739135 34739307 -131910989 - B2_Mm1t SINE B2 0 193 1 7 850 1746 150 24 30 chrX 34739333 34739628 -131910668 + RLTR14-int LTR ERV1 4544 4836 -481 7 850 2462 147 52 33 chrX 34739828 34740307 -131909989 + RLTR14-int LTR ERV1 4830 5317 0 7 850 2045 172 58 3 chrX 34740307 34740669 -131909627 + RLTR14 LTR ERV1 1 382 0 7 850 282 29 0 0 chrX 34741247 34741282 -131909014 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 7 850 336 301 35 0 chrX 34741397 34741510 -131908786 - B1F2 SINE Alu -32 117 1 7 850 295 207 0 0 chrX 34741590 34741648 -131908648 + BC1_Mm scRNA scRNA 13 70 -82 7 850 342 0 0 0 chrX 34741673 34741711 -131908585 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 7 850 4350 58 2 7 chrX 34741733 34742285 -131908011 - L1Md_F3 LINE L1 -4 6580 6032 7 850 304 236 73 27 chrX 34742316 34742414 -131907882 + PB1D10 SINE Alu 2 107 -13 7 850 251 28 0 27 chrX 34742414 34742451 -131907845 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 7 850 1098 234 30 13 chrX 34742598 34742961 -131907335 + MTD LTR MaLR 12 419 0 7 850 988 234 5 0 chrX 34743330 34743544 -131906752 + B3 SINE B2 1 215 -1 7 850 663 253 26 13 chrX 34744583 34744739 -131905557 + RSINE1 SINE B4 3 160 -5 7 850 1280 111 16 5 chrX 34745123 34745314 -131904982 - B2_Mm2 SINE B2 -1 194 2 7 850 268 299 42 49 chrX 34745798 34745942 -131904354 + RLTR14 LTR ERV1 225 367 -15 7 850 1387 70 5 11 chrX 34745985 34746172 -131904124 - B2_Mm2 SINE B2 -8 187 2 7 850 24 67 0 0 chrX 34746208 34746253 -131904043 + AT_rich Low_complexity Low_complexity 1 45 0 7 850 758 204 5 130 chrX 34746258 34746466 -131903830 - B3A SINE B2 -16 182 1 7 850 536 220 8 17 chrX 34746514 34746634 -131903662 - B1_Mur1 SINE Alu -23 126 8 7 850 241 279 61 61 chrX 34746551 34746650 -131903646 - B4 SINE B4 -114 178 80 7 850 662 233 0 20 chrX 34746670 34746823 -131903473 - B1_Mur4 SINE Alu 0 150 1 7 850 755 100 83 0 chrX 34746823 34746943 -131903353 - L1_Mus2 LINE L1 -77 6489 6360 7 850 229 302 49 59 chrX 34747040 34747142 -131903154 - PB1D10 SINE Alu -9 108 8 7 850 273 299 0 38 chrX 34747074 34747154 -131903142 - ID_B1 SINE B4 -68 156 80 7 850 702 271 50 10 chrX 34747150 34747351 -131902945 - ID_B1 SINE B4 0 224 16 7 850 620 236 0 0 chrX 34747538 34747661 -131902635 - B1_Mur2 SINE Alu -6 143 21 7 850 522 291 38 12 chrX 34747670 34747830 -131902466 - RSINE1 SINE B4 0 165 2 7 850 21 0 0 0 chrX 34747899 34747920 -131902376 + AT_rich Low_complexity Low_complexity 1 21 0 7 850 360 0 0 0 chrX 34748040 34748080 -131902216 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 850 504 68 0 0 chrX 34748080 34748153 -131902143 + (GA)n Simple_repeat Simple_repeat 2 74 0 7 850 607 264 38 0 chrX 34748159 34748318 -131901978 - B3A SINE B2 -33 165 1 7 850 248 271 18 61 chrX 34748480 34748594 -131901702 + B1F1 SINE Alu 40 148 -1 7 850 386 286 86 59 chrX 34748699 34748885 -131901411 - B3A SINE B2 -6 192 2 7 850 344 257 130 17 chrX 34748931 34749046 -131901250 - RSINE1 SINE B4 -36 129 2 7 850 1026 120 63 42 chrX 34751775 34751966 -131898330 + B2_Mm2 SINE B2 1 195 0 7 850 376 327 54 41 chrX 34752438 34752881 -131897415 + L1M3 LINE L1 5355 5803 -380 7 850 257 212 16 53 chrX 34753053 34753174 -131897122 - PB1 SINE Alu -3 124 1 7 850 569 276 64 37 chrX 34754924 34755112 -131895184 + B3A SINE B2 2 194 -4 7 850 948 230 19 14 chrX 34755143 34755350 -131894946 + B3 SINE B2 1 208 -8 7 850 186 43 0 0 chrX 34755403 34755426 -131894870 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 850 309 342 61 0 chrX 34756113 34756227 -131894069 - RSINE1 SINE B4 -23 142 22 7 850 357 330 0 0 chrX 34756293 34756399 -131893897 - ID_B1 SINE B4 -19 205 100 7 850 298 205 0 90 chrX 34756405 34756494 -131893802 - B1F SINE Alu 0 149 48 7 850 1123 70 0 14 chrX 34756684 34756828 -131893468 + B1_Mus1 SINE Alu 1 142 -6 7 850 225 0 0 0 chrX 34756832 34756857 -131893439 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7 850 945 197 78 0 chrX 34756911 34756937 -131893359 - B3 SINE B2 -8 208 183 7 850 207 0 0 0 chrX 34756937 34756960 -131893336 + (TATG)n Simple_repeat Simple_repeat 4 26 0 7 850 945 197 78 0 chrX 34756960 34757126 -131893170 - B3 SINE B2 -34 182 3 7 850 264 311 68 0 chrX 34757373 34757521 -131892775 + RSINE1 SINE B4 4 161 -4 7 850 974 46 8 0 chrX 34758608 34758739 -131891557 + B1_Mus2 SINE Alu 16 147 0 7 850 210 156 0 0 chrX 34758740 34758785 -131891511 + A-rich Low_complexity Low_complexity 1 45 0 7 850 288 0 0 0 chrX 34759481 34759513 -131890783 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 850 22 35 0 0 chrX 34759940 34759969 -131890327 + AT_rich Low_complexity Low_complexity 1 29 0 7 850 250 185 8 0 chrX 34760085 34760145 -131890151 - B1_Mur2 SINE Alu 0 149 85 7 850 4684 208 97 4 chrX 34760651 34761664 -131888632 - Lx9 LINE L1 -154 7490 6384 7 850 1463 242 71 113 chrX 34761667 34762365 -131887931 + RLTR19-int LTR ERVK 2345 3011 -3126 7 850 3269 62 7 0 chrX 34762365 34762769 -131887527 + MTB_Mm LTR MaLR 1 407 0 7 850 1463 257 90 113 chrX 34762769 34762978 -131887318 + RLTR19-int LTR ERVK 3012 3075 -3062 7 850 331 166 6 208 chrX 34763135 34763303 -131886993 + RLTR19-int LTR ERVK 3413 3546 -2591 7 850 1814 192 136 52 chrX 34763341 34763885 -131886411 + RMER19B LTR ERVK 309 898 -4 7 850 2640 50 3 0 chrX 34763885 34764208 -131886088 + L1Md_F2 LINE L1 6247 6570 -12 7 850 207 0 0 0 chrX 34764238 34764261 -131886035 + (TCC)n Simple_repeat Simple_repeat 1 23 0 7 850 1180 120 33 0 chrX 34764261 34764444 -131885852 - B2_Mm1t SINE B2 -3 190 2 7 850 997 212 83 93 chrX 34764445 34764855 -131885441 + RLTR19-int LTR ERVK 3551 3956 -2181 7 850 385 174 44 44 chrX 34765180 34765270 -131885026 + RLTR19-int LTR ERVK 4230 4319 -1818 7 850 285 298 30 152 chrX 34765322 34765515 -131884781 + RMER10A LTR ERVL 13 177 -265 7 850 1388 65 43 0 chrX 34765515 34765700 -131884596 - B2_Mm1t SINE B2 0 193 1 7 850 285 298 30 152 chrX 34765700 34765966 -131884330 + RMER10A LTR ERVL 178 415 -27 7 850 327 132 0 0 chrX 34766082 34766135 -131884161 + RMER6C LTR ERVK 12 64 -656 7 850 1082 108 0 0 chrX 34766145 34766311 -131883985 - Lx2 LINE L1 0 6997 6832 7 850 940 159 0 6 chrX 34766313 34766471 -131883825 + Lx2 LINE L1 6538 6694 -303 7 850 28 0 0 0 chrX 34767087 34767115 -131883181 + AT_rich Low_complexity Low_complexity 1 28 0 7 850 3176 71 2 7 chrX 34767115 34767525 -131882771 + L1_Mus1 LINE L1 6160 6567 0 7 850 1072 138 17 0 chrX 34767540 34767721 -131882575 + B2_Mm2 SINE B2 12 195 0 7 850 2137 176 53 78 chrX 34767717 34767922 -131882374 + RMER6C LTR ERVK 53 257 -433 7 850 245 29 0 29 chrX 34767922 34767957 -131882339 + (AATAG)n Simple_repeat Simple_repeat 4 37 0 7 850 450 0 0 0 chrX 34767957 34768006 -131882290 + (GA)n Simple_repeat Simple_repeat 2 51 0 7 850 2137 176 43 64 chrX 34768006 34768583 -131881713 + RMER6C LTR ERVK 257 717 -39 7 850 3271 196 114 156 chrX 34768587 34768781 -131881515 - RMER1B Other Other -5 1061 848 7 850 1385 45 0 11 chrX 34768781 34768963 -131881333 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 850 3271 196 114 156 chrX 34768963 34768991 -131881305 - RMER1B Other Other -219 847 847 7 850 1469 23 0 6 chrX 34768991 34769169 -131881127 + (TTC)n Simple_repeat Simple_repeat 3 179 0 7 850 3271 196 114 156 chrX 34769169 34770053 -131880243 - RMER1B Other Other -219 847 1 7 850 326 272 168 66 chrX 34770088 34770332 -131879964 - Lx8 LINE L1 0 7473 7205 7 850 1327 66 11 11 chrX 34770346 34770531 -131879765 - L1Md_F2 LINE L1 -14 6568 6384 7 850 382 83 0 0 chrX 34770574 34770622 -131879674 - Lx4A LINE L1 -671 6387 6340 7 850 7150 48 3 1 chrX 34770620 34771498 -131878798 - L1Md_F2 LINE L1 -12 6570 5679 7 850 254 292 77 45 chrX 34771510 34771757 -131878539 - RLTR15 LTR ERVK -60 299 45 7 850 298 289 44 0 chrX 34771947 34772037 -131878259 - Lx8 LINE L1 -1018 6455 6362 7 850 1218 283 16 22 chrX 34772037 34772405 -131877891 + ORR1D2 LTR MaLR 1 366 -4 7 850 2462 237 55 46 chrX 34772409 34773149 -131877147 + ORR1D2-int LTR MaLR 1 747 -623 7 850 310 293 49 138 chrX 34773599 34773924 -131876372 + RMER10A LTR ERVL 122 417 -25 7 850 2205 176 102 43 chrX 34774068 34774537 -131875759 - RLTR19 LTR ERVK -2 497 1 7 850 2769 148 136 64 chrX 34775327 34775969 -131874327 + RMER6C LTR ERVK 3 690 0 7 850 4118 60 2 26 chrX 34776505 34777037 -131873259 - L1Md_F2 LINE L1 0 6582 6064 7 850 868 240 15 24 chrX 34777409 34777614 -131872682 + B3 SINE B2 1 203 -13 7 850 24 0 0 0 chrX 34777614 34777638 -131872658 + AT_rich Low_complexity Low_complexity 1 24 0 7 850 1731 187 91 39 chrX 34777651 34778013 -131872283 + ORR1C2 LTR MaLR 1 381 -3 7 850 978 221 37 5 chrX 34778017 34778208 -131872088 - B3 SINE B2 -18 198 2 7 850 480 229 0 0 chrX 34779711 34779851 -131870445 + (TA)n Simple_repeat Simple_repeat 1 140 0 7 850 1091 259 99 59 chrX 34779992 34780496 -131869800 - Lx7 LINE L1 -1742 5954 5398 7 850 261 0 0 0 chrX 34780559 34780588 -131869708 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 7 850 21 0 0 0 chrX 34782100 34782121 -131868175 + AT_rich Low_complexity Low_complexity 1 21 0 7 850 496 239 176 25 chrX 34782435 34782594 -131867702 + B3A SINE B2 1 183 -15 7 850 192 111 0 0 chrX 34782662 34782698 -131867598 + (CCA)n Simple_repeat Simple_repeat 3 38 0 7 850 510 307 15 5 chrX 34782868 34783074 -131867222 + L1_Mur3 LINE L1 5117 5324 -556 7 850 416 375 67 7 chrX 34783084 34783369 -131866927 + Lx8 LINE L1 7079 7380 -93 7 850 429 300 29 70 chrX 34783629 34783801 -131866495 - ID_B1 SINE B4 -56 168 4 8 850 208 255 0 0 chrX 34784097 34784144 -131866152 + (CATATA)n Simple_repeat Simple_repeat 6 52 0 8 850 324 0 0 0 chrX 34784233 34784269 -131866027 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 850 22 35 0 0 chrX 34785748 34785777 -131864519 + AT_rich Low_complexity Low_complexity 1 29 0 8 850 216 111 0 0 chrX 34785814 34785850 -131864446 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 850 410 282 74 30 chrX 34785861 34785996 -131864300 - RSINE1 SINE B4 0 165 25 8 850 237 352 121 0 chrX 34786134 34786225 -131864071 + ID_B1 SINE B4 86 187 -37 8 850 316 304 144 0 chrX 34786524 34786649 -131863647 + RSINE1 SINE B4 12 154 -11 8 850 22 35 0 0 chrX 34787368 34787397 -131862899 + AT_rich Low_complexity Low_complexity 1 29 0 8 850 282 339 49 71 chrX 34787816 34788000 -131862296 - B3A SINE B2 -17 181 2 8 850 180 200 0 0 chrX 34788285 34788330 -131861966 + (TA)n Simple_repeat Simple_repeat 2 46 0 8 850 815 179 21 0 chrX 34788372 34788517 -131861779 - B1_Mur4 SINE Alu -1 149 2 8 850 246 283 0 0 chrX 34788814 34788874 -131861422 - Lx8 LINE L1 -121 7352 7293 8 850 354 23 0 0 chrX 34788886 34788929 -131861367 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 850 664 339 80 30 chrX 34788981 34789343 -131860953 - Lx8 LINE L1 -467 7006 6627 8 850 302 245 75 47 chrX 34790557 34790664 -131859632 + ID_B1 SINE B4 104 213 -11 8 850 649 275 47 12 chrX 34790894 34791106 -131859190 + B3A SINE B2 3 216 0 8 850 326 319 65 32 chrX 34791114 34791237 -131859059 + B3A SINE B2 28 154 -44 8 850 600 111 0 0 chrX 34791238 34791328 -131858968 + (CA)n Simple_repeat Simple_repeat 2 91 0 8 850 31 26 0 0 chrX 34791689 34791727 -131858569 + AT_rich Low_complexity Low_complexity 1 38 0 8 850 417 266 122 17 chrX 34791732 34791847 -131858449 + RSINE1 SINE B4 3 129 -36 8 850 236 245 0 0 chrX 34791987 34792040 -131858256 + L1M4 LINE L1 1410 1462 -5080 8 850 236 245 0 0 chrX 34792049 34792102 -131858194 + L1M4 LINE L1 1410 1462 -5080 8 850 245 178 0 0 chrX 34792115 34792160 -131858136 + L1M4 LINE L1 1414 1458 -5084 8 850 437 352 21 0 chrX 34792239 34792381 -131857915 + RSINE1 SINE B4 2 146 -19 8 850 23 33 0 0 chrX 34792397 34792427 -131857869 + AT_rich Low_complexity Low_complexity 1 30 0 8 850 329 297 120 13 chrX 34792928 34793174 -131857122 + L1M4 LINE L1 2999 3270 -3371 8 850 240 264 0 0 chrX 34793382 34793435 -131856861 - ID SINE ID -170 54 2 8 850 342 0 0 0 chrX 34793827 34793865 -131856431 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 850 1426 194 9 93 chrX 34794115 34794439 -131855857 - ORR1D1 LTR MaLR -77 297 1 8 850 438 301 51 6 chrX 34795846 34796003 -131854293 - RSINE1 SINE B4 0 165 2 8 850 563 240 31 8 chrX 34796351 34796481 -131853815 - B1F2 SINE Alu -16 133 1 8 850 281 278 63 94 chrX 34796621 34796748 -131853548 - B1_Mur4 SINE Alu -18 132 10 8 850 549 315 0 59 chrX 34796840 34796992 -131853304 + RSINE1 SINE B4 1 143 -22 8 850 261 330 21 31 chrX 34797724 34797821 -131852475 - B3 SINE B2 -25 191 96 8 850 481 295 8 8 chrX 34797823 34797953 -131852343 - B3A SINE B2 -60 138 9 8 850 1707 271 57 30 chrX 34800151 34800840 -131849456 + L1_Rod LINE L1 1704 2410 -3437 8 850 367 265 26 0 chrX 34800846 34800997 -131849299 + (CA)n Simple_repeat Simple_repeat 2 156 0 8 850 183 204 0 0 chrX 34801010 34801059 -131849237 + (CA)n Simple_repeat Simple_repeat 1 49 0 8 850 3889 166 2 2 chrX 34801109 34801724 -131848572 + Lx LINE L1 5849 6463 -191 8 850 262 221 35 26 chrX 34801827 34801943 -131848353 + (TTATA)n Simple_repeat Simple_repeat 3 119 0 8 850 713 264 42 69 chrX 34802049 34802309 -131847987 - Lx6 LINE L1 0 7460 7208 8 850 514 224 17 25 chrX 34802326 34802445 -131847851 + B3 SINE B2 72 189 -27 8 850 794 210 46 7 chrX 34802918 34803114 -131847182 - Lx4B LINE L1 -274 6784 6583 8 850 356 252 15 30 chrX 34803287 34803422 -131846874 + L1M3 LINE L1 4273 4405 -1735 8 850 846 135 53 77 chrX 34803427 34803596 -131846700 + B2_Mm2 SINE B2 4 168 -27 8 850 806 237 114 47 chrX 34803596 34803937 -131846359 + L1_Rod LINE L1 5174 5537 -310 8 850 270 169 17 17 chrX 34803948 34804008 -131846288 + B1_Mus2 SINE Alu 86 145 -2 8 850 258 156 0 0 chrX 34804039 34804084 -131846212 + A-rich Low_complexity Low_complexity 1 45 0 8 850 420 254 47 22 chrX 34804858 34804997 -131845299 - B1_Mur2 SINE Alu -8 142 1 8 850 185 0 0 39 chrX 34805714 34805740 -131844556 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 8 850 270 274 105 0 chrX 34806286 34806381 -131843915 - RSINE1 SINE B4 -13 152 48 8 850 435 226 0 0 chrX 34806570 34806663 -131843633 + MTC LTR MaLR 1 93 -328 8 850 593 244 0 0 chrX 34806691 34806810 -131843486 + B3 SINE B2 12 130 -86 8 850 1591 198 66 3 chrX 34806871 34807191 -131843105 + MTC LTR MaLR 82 421 0 8 850 381 131 0 0 chrX 34807414 34807475 -131842821 + (TG)n Simple_repeat Simple_repeat 2 62 0 8 850 1016 93 0 0 chrX 34807510 34807649 -131842647 + B1_Mus2 SINE Alu 9 147 0 8 850 296 152 15 0 chrX 34807649 34807715 -131842581 + A-rich Low_complexity Low_complexity 3 69 0 8 850 1002 205 200 57 chrX 34807963 34808278 -131842018 - ORR1D1 LTR MaLR 0 374 15 8 850 608 172 0 0 chrX 34808328 34808427 -131841869 - B1_Mur4 SINE Alu -27 123 25 8 850 522 221 182 31 chrX 34808791 34808950 -131841346 - B3A SINE B2 -15 183 1 8 850 901 312 18 10 chrX 34810754 34811139 -131839157 + L1_Mur3 LINE L1 4931 5318 -562 8 850 422 371 73 8 chrX 34811155 34811525 -131838771 + Lx8 LINE L1 7079 7472 -1 8 850 419 310 27 66 chrX 34811691 34811874 -131838422 - ID_B1 SINE B4 -45 179 4 8 850 657 144 0 0 chrX 34812183 34812301 -131837995 + (TA)n Simple_repeat Simple_repeat 2 119 0 8 850 334 298 74 30 chrX 34812453 34812588 -131837708 - RSINE1 SINE B4 0 165 25 8 850 219 376 101 0 chrX 34812729 34812838 -131837458 + ID_B1 SINE B4 86 205 -19 8 850 216 328 144 0 chrX 34813119 34813244 -131837052 + RSINE1 SINE B4 12 154 -11 8 850 220 203 29 14 chrX 34813952 34814022 -131836274 + T-rich Low_complexity Low_complexity 6 76 0 8 850 225 200 0 0 chrX 34814885 34814930 -131835366 + (TA)n Simple_repeat Simple_repeat 2 46 0 8 850 803 179 21 0 chrX 34814972 34815117 -131835179 - B1_Mur4 SINE Alu -1 149 2 8 850 195 42 0 0 chrX 34815464 34815488 -131834808 + (CA)n Simple_repeat Simple_repeat 2 25 0 8 850 312 27 0 0 chrX 34815488 34815525 -131834771 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 850 2238 189 102 43 chrX 34815638 34816107 -131834189 - RLTR19 LTR ERVK -2 497 1 8 850 2770 158 123 51 chrX 34816896 34817538 -131832758 + RMER6C LTR ERVK 3 690 0 8 850 270 0 0 0 chrX 34818019 34818049 -131832247 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 850 4158 72 4 21 chrX 34818091 34818619 -131831677 - L1Md_F2 LINE L1 0 6582 6064 8 850 952 240 15 24 chrX 34818991 34819196 -131831100 + B3 SINE B2 1 203 -13 8 850 24 0 0 0 chrX 34819196 34819220 -131831076 + AT_rich Low_complexity Low_complexity 1 24 0 8 850 1731 187 91 39 chrX 34819233 34819595 -131830701 + ORR1C2 LTR MaLR 1 381 -3 8 850 978 221 37 5 chrX 34819599 34819790 -131830506 - B3 SINE B2 -18 198 2 8 850 546 224 0 0 chrX 34821293 34821445 -131828851 + (TA)n Simple_repeat Simple_repeat 1 152 0 8 850 1085 259 99 61 chrX 34821586 34822091 -131828205 - Lx7 LINE L1 -1742 5954 5398 8 850 297 0 0 0 chrX 34822154 34822187 -131828109 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 8 850 21 0 0 0 chrX 34823699 34823720 -131826576 + AT_rich Low_complexity Low_complexity 1 21 0 8 850 496 239 176 25 chrX 34824034 34824193 -131826103 + B3A SINE B2 1 183 -15 8 850 192 111 0 0 chrX 34824261 34824297 -131825999 + (CCA)n Simple_repeat Simple_repeat 3 38 0 8 850 510 307 15 5 chrX 34824467 34824673 -131825623 + L1_Mur3 LINE L1 5117 5324 -556 8 850 416 375 67 7 chrX 34824683 34824968 -131825328 + Lx8 LINE L1 7079 7380 -93 8 850 429 300 29 70 chrX 34825228 34825400 -131824896 - ID_B1 SINE B4 -56 168 4 8 850 208 255 0 0 chrX 34825696 34825743 -131824553 + (CATATA)n Simple_repeat Simple_repeat 6 52 0 8 850 360 0 0 0 chrX 34825832 34825872 -131824424 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 850 22 35 0 0 chrX 34827351 34827380 -131822916 + AT_rich Low_complexity Low_complexity 1 29 0 8 850 405 0 0 0 chrX 34827399 34827444 -131822852 + (TC)n Simple_repeat Simple_repeat 2 46 0 8 850 180 125 0 0 chrX 34827444 34827475 -131822821 + (TG)n Simple_repeat Simple_repeat 1 32 0 8 850 369 298 74 30 chrX 34827486 34827621 -131822675 - RSINE1 SINE B4 0 165 25 8 850 214 363 121 0 chrX 34827762 34827853 -131822443 + ID_B1 SINE B4 86 187 -37 8 850 276 312 143 8 chrX 34828151 34828277 -131822019 + RSINE1 SINE B4 12 154 -11 8 850 23 33 0 0 chrX 34828996 34829026 -131821270 + AT_rich Low_complexity Low_complexity 1 30 0 8 850 262 345 49 71 chrX 34829444 34829628 -131820668 - B3A SINE B2 -17 181 2 8 850 180 200 0 0 chrX 34829913 34829958 -131820338 + (TA)n Simple_repeat Simple_repeat 2 46 0 8 850 815 179 21 0 chrX 34830000 34830145 -131820151 - B1_Mur4 SINE Alu -1 149 2 8 850 246 283 0 0 chrX 34830442 34830502 -131819794 - Lx8 LINE L1 -121 7352 7293 8 850 339 44 0 0 chrX 34830514 34830559 -131819737 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 850 662 328 81 42 chrX 34830590 34830972 -131819324 - Lx8 LINE L1 -450 7023 6627 8 850 326 235 75 47 chrX 34832162 34832269 -131818027 + ID_B1 SINE B4 104 213 -11 8 850 210 351 86 26 chrX 34832280 34832432 -131817864 + ID_B1 SINE B4 1 161 -63 9 850 658 278 44 9 chrX 34832499 34832711 -131817585 + B3A SINE B2 3 216 0 9 850 326 319 65 32 chrX 34832719 34832842 -131817454 + B3A SINE B2 28 154 -44 9 850 522 83 0 0 chrX 34832843 34832915 -131817381 + (CA)n Simple_repeat Simple_repeat 2 73 0 9 850 31 26 0 0 chrX 34833276 34833314 -131816982 + AT_rich Low_complexity Low_complexity 1 38 0 9 850 427 257 122 17 chrX 34833319 34833434 -131816862 + RSINE1 SINE B4 3 129 -36 9 850 236 245 0 0 chrX 34833574 34833627 -131816669 + L1M4 LINE L1 1410 1462 -5080 9 850 236 245 0 0 chrX 34833636 34833689 -131816607 + L1M4 LINE L1 1410 1462 -5080 9 850 245 178 0 0 chrX 34833764 34833809 -131816487 + L1M4 LINE L1 1414 1458 -5084 9 850 461 345 21 0 chrX 34833888 34834030 -131816266 + RSINE1 SINE B4 2 146 -19 9 850 23 33 0 0 chrX 34834046 34834076 -131816220 + AT_rich Low_complexity Low_complexity 1 30 0 9 850 236 311 67 6 chrX 34834583 34834826 -131815470 + L1M4 LINE L1 3002 3270 -3368 9 850 240 264 0 0 chrX 34835034 34835087 -131815209 - ID SINE ID -170 54 2 9 850 537 16 0 0 chrX 34835480 34835542 -131814754 + (TG)n Simple_repeat Simple_repeat 1 62 0 9 850 1426 194 9 93 chrX 34835792 34836116 -131814180 - ORR1D1 LTR MaLR -77 297 1 9 850 470 304 12 19 chrX 34837519 34837680 -131812616 - RSINE1 SINE B4 -4 161 2 9 850 562 240 31 8 chrX 34838028 34838158 -131812138 - B1F2 SINE Alu -16 133 1 9 850 276 244 62 102 chrX 34838296 34838424 -131811872 - B1_Mur4 SINE Alu -18 132 10 9 850 539 322 0 59 chrX 34838516 34838668 -131811628 + RSINE1 SINE B4 1 143 -22 9 850 506 324 7 7 chrX 34839487 34839630 -131810666 - B3A SINE B2 -47 151 9 9 850 1640 276 57 30 chrX 34841818 34842507 -131807789 + L1_Rod LINE L1 1704 2410 -3437 9 850 367 265 26 0 chrX 34842513 34842664 -131807632 + (CA)n Simple_repeat Simple_repeat 2 156 0 9 850 183 204 0 0 chrX 34842677 34842726 -131807570 + (CA)n Simple_repeat Simple_repeat 1 49 0 9 850 3732 171 10 2 chrX 34842776 34843386 -131806910 + Lx LINE L1 5849 6463 -191 9 850 250 218 17 52 chrX 34843489 34843605 -131806691 + (TTATA)n Simple_repeat Simple_repeat 3 114 0 9 850 588 274 113 54 chrX 34843711 34843950 -131806346 - Lx6 LINE L1 0 7460 7208 9 850 534 216 17 25 chrX 34843967 34844086 -131806210 + B3 SINE B2 72 189 -27 9 850 21 36 0 0 chrX 34844488 34844516 -131805780 + AT_rich Low_complexity Low_complexity 1 28 0 9 850 826 205 46 7 chrX 34844559 34844755 -131805541 - Lx4B LINE L1 -274 6784 6583 9 850 365 215 14 14 chrX 34844925 34845061 -131805235 + L1_Rod LINE L1 4235 4370 -1477 9 850 803 141 52 98 chrX 34845068 34845241 -131805055 + B2_Mm2 SINE B2 4 168 -27 9 850 776 240 114 52 chrX 34845241 34845584 -131804712 + L1_Rod LINE L1 5174 5537 -310 9 850 290 152 17 17 chrX 34845595 34845655 -131804641 + B1_Mus2 SINE Alu 86 145 -2 9 850 292 60 60 0 chrX 34845686 34845736 -131804560 + (GAAAA)n Simple_repeat Simple_repeat 2 54 0 9 850 434 246 49 24 chrX 34846520 34846658 -131803638 - B1_Mur2 SINE Alu -8 141 1 9 850 185 0 0 39 chrX 34847340 34847366 -131802930 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 9 850 274 263 105 0 chrX 34847912 34848007 -131802289 - RSINE1 SINE B4 -13 152 48 9 850 435 226 0 0 chrX 34848196 34848289 -131802007 + MTC LTR MaLR 1 93 -328 9 850 593 244 0 0 chrX 34848317 34848436 -131801860 + B3 SINE B2 12 130 -86 9 850 1514 196 75 6 chrX 34848497 34848815 -131801481 + MTC LTR MaLR 82 421 0 9 850 207 0 0 0 chrX 34848979 34849002 -131801294 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 850 249 196 0 0 chrX 34849046 34849097 -131801199 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 850 402 214 38 114 chrX 34849108 34849240 -131801056 + MT2B LTR ERVL 147 268 -333 9 850 1016 93 0 0 chrX 34849132 34849271 -131801025 + B1_Mus2 SINE Alu 9 147 0 9 850 326 129 16 0 chrX 34849272 34849334 -131800962 + (GAAAA)n Simple_repeat Simple_repeat 2 64 0 9 850 1012 202 200 57 chrX 34849582 34849897 -131800399 - ORR1D1 LTR MaLR 0 374 15 9 850 608 172 0 0 chrX 34849947 34850046 -131800250 - B1_Mur4 SINE Alu -27 123 25 9 850 504 221 182 31 chrX 34850410 34850569 -131799727 - B3A SINE B2 -15 183 1 9 850 435 38 0 0 chrX 34850802 34850855 -131799441 + (TA)n Simple_repeat Simple_repeat 1 53 0 9 850 973 300 18 10 chrX 34852410 34852801 -131797495 + L1_Mur3 LINE L1 4931 5324 -556 9 850 372 396 50 0 chrX 34852811 34853129 -131797167 + Lx8 LINE L1 7079 7412 -61 9 850 410 307 45 67 chrX 34853355 34853533 -131796763 - ID_B1 SINE B4 -47 177 4 9 850 543 164 0 0 chrX 34853842 34853946 -131796350 + (TA)n Simple_repeat Simple_repeat 2 105 0 9 850 337 298 74 30 chrX 34854096 34854231 -131796065 - RSINE1 SINE B4 0 165 25 9 850 217 367 100 9 chrX 34854372 34854482 -131795814 + ID_B1 SINE B4 86 205 -19 9 850 253 312 144 0 chrX 34854763 34854888 -131795408 + RSINE1 SINE B4 12 154 -11 9 850 22 35 0 0 chrX 34855606 34855635 -131794661 + AT_rich Low_complexity Low_complexity 1 29 0 9 850 229 282 0 0 chrX 34856489 34856560 -131793736 + (TA)n Simple_repeat Simple_repeat 2 72 0 9 850 818 179 21 0 chrX 34856602 34856747 -131793549 - B1_Mur4 SINE Alu -1 149 2 9 850 231 36 0 0 chrX 34857094 34857122 -131793174 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 850 351 44 0 0 chrX 34857122 34857167 -131793129 + (TG)n Simple_repeat Simple_repeat 1 45 0 9 850 2238 189 102 43 chrX 34857280 34857749 -131792547 - RLTR19 LTR ERVK -2 497 1 9 850 2839 157 137 64 chrX 34858540 34859181 -131791115 + RMER6C LTR ERVK 3 690 0 9 850 324 0 0 0 chrX 34859662 34859698 -131790598 + (TG)n Simple_repeat Simple_repeat 1 36 0 9 850 4113 73 4 26 chrX 34859740 34860271 -131790025 - L1Md_F2 LINE L1 0 6582 6064 9 850 935 245 15 24 chrX 34860643 34860848 -131789448 + B3 SINE B2 1 203 -13 9 850 24 0 0 0 chrX 34860848 34860872 -131789424 + AT_rich Low_complexity Low_complexity 1 24 0 9 850 1713 190 91 39 chrX 34860885 34861247 -131789049 + ORR1C2 LTR MaLR 1 381 -3 9 850 978 221 37 5 chrX 34861251 34861442 -131788854 - B3 SINE B2 -18 198 2 9 850 387 60 0 0 chrX 34862944 34862994 -131787302 + (TATG)n Simple_repeat Simple_repeat 3 52 0 9 850 1103 261 100 54 chrX 34863174 34863683 -131786613 - Lx7 LINE L1 -1731 5965 5398 9 850 207 0 0 0 chrX 34863746 34863769 -131786527 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 9 851 21 0 0 0 chrX 34865277 34865298 -131784998 + AT_rich Low_complexity Low_complexity 1 21 0 9 851 496 239 176 25 chrX 34865610 34865769 -131784527 + B3A SINE B2 1 183 -15 9 851 192 111 0 0 chrX 34865837 34865873 -131784423 + (CCA)n Simple_repeat Simple_repeat 3 38 0 9 851 489 312 15 5 chrX 34866043 34866249 -131784047 + L1_Mur3 LINE L1 5117 5324 -556 9 851 416 375 67 7 chrX 34866259 34866544 -131783752 + Lx8 LINE L1 7079 7380 -93 9 851 429 300 29 70 chrX 34866804 34866976 -131783320 - ID_B1 SINE B4 -56 168 4 9 851 208 255 0 0 chrX 34867272 34867319 -131782977 + (CATATA)n Simple_repeat Simple_repeat 6 52 0 9 851 360 0 0 0 chrX 34867408 34867448 -131782848 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 851 22 35 0 0 chrX 34868927 34868956 -131781340 + AT_rich Low_complexity Low_complexity 1 29 0 9 851 207 0 0 0 chrX 34868975 34868998 -131781298 + (TC)n Simple_repeat Simple_repeat 2 24 0 9 851 270 95 0 0 chrX 34868998 34869039 -131781257 + (TG)n Simple_repeat Simple_repeat 1 42 0 9 851 390 290 74 30 chrX 34869050 34869185 -131781111 - RSINE1 SINE B4 0 165 25 9 851 214 363 121 0 chrX 34869326 34869417 -131780879 + ID_B1 SINE B4 86 187 -37 9 851 295 312 144 0 chrX 34869716 34869841 -131780455 + RSINE1 SINE B4 12 154 -11 9 851 23 33 0 0 chrX 34870560 34870590 -131779706 + AT_rich Low_complexity Low_complexity 1 30 0 9 851 262 345 49 71 chrX 34871008 34871192 -131779104 - B3A SINE B2 -17 181 2 9 851 180 200 0 0 chrX 34871477 34871522 -131778774 + (TA)n Simple_repeat Simple_repeat 2 46 0 9 851 815 179 21 0 chrX 34871564 34871709 -131778587 - B1_Mur4 SINE Alu -1 149 2 9 851 411 38 0 0 chrX 34872079 34872132 -131778164 + (TG)n Simple_repeat Simple_repeat 2 54 0 9 851 662 328 81 42 chrX 34872163 34872545 -131777751 - Lx8 LINE L1 -450 7023 6627 9 851 302 245 75 47 chrX 34873735 34873842 -131776454 + ID_B1 SINE B4 104 213 -11 9 851 218 351 86 26 chrX 34873853 34874005 -131776291 + ID_B1 SINE B4 1 161 -63 9 851 671 273 44 9 chrX 34874072 34874284 -131776012 + B3A SINE B2 3 216 0 9 851 322 302 8 57 chrX 34874292 34874415 -131775881 + B3A SINE B2 28 144 -54 9 851 390 129 0 0 chrX 34874416 34874478 -131775818 + (CA)n Simple_repeat Simple_repeat 2 63 0 9 851 31 26 0 0 chrX 34874838 34874876 -131775420 + AT_rich Low_complexity Low_complexity 1 38 0 9 851 427 257 122 17 chrX 34874881 34874996 -131775300 + RSINE1 SINE B4 3 129 -36 9 851 249 226 0 0 chrX 34875136 34875189 -131775107 + L1M4 LINE L1 1410 1462 -5080 9 851 280 175 0 17 chrX 34875322 34875380 -131774916 + L1M4 LINE L1 1410 1466 -5076 9 851 450 352 21 0 chrX 34875450 34875592 -131774704 + RSINE1 SINE B4 2 146 -19 9 851 23 33 0 0 chrX 34875608 34875638 -131774658 + AT_rich Low_complexity Low_complexity 1 30 0 9 851 301 271 160 57 chrX 34875679 34875961 -131774335 + L1MEc LINE L1 1284 1594 -4806 9 851 38748 43 0 3 chrX 34876312 34882572 -131767724 - L1Md_T LINE L1 0 6585 249 9 851 301 302 25 17 chrX 34882573 34882691 -131767605 + L1M2 LINE L1 2654 2772 -3371 9 851 240 264 0 0 chrX 34882898 34882951 -131767345 - ID SINE ID -170 54 2 9 851 387 0 0 0 chrX 34883323 34883366 -131766930 + (TG)n Simple_repeat Simple_repeat 1 43 0 9 851 1456 187 9 93 chrX 34883616 34883940 -131766356 - ORR1D1 LTR MaLR -77 297 1 1 851 475 288 51 6 chrX 34885348 34885505 -131764791 - RSINE1 SINE B4 0 165 2 1 851 555 222 55 8 chrX 34885853 34885980 -131764316 - B1_Mur1 SINE Alu -16 133 1 1 851 248 252 62 102 chrX 34886120 34886248 -131764048 - B1_Mur4 SINE Alu -18 132 10 1 851 430 327 11 95 chrX 34886340 34886519 -131763777 + RSINE1 SINE B4 1 164 -1 1 851 234 340 21 31 chrX 34887219 34887316 -131762980 - B3 SINE B2 -25 191 96 1 851 472 302 8 8 chrX 34887318 34887448 -131762848 - B3A SINE B2 -60 138 9 1 851 1629 272 57 30 chrX 34889650 34890339 -131759957 + L1_Rod LINE L1 1704 2410 -3437 1 851 367 265 26 0 chrX 34890345 34890496 -131759800 + (CA)n Simple_repeat Simple_repeat 2 156 0 1 851 183 204 0 0 chrX 34890509 34890558 -131759738 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 851 3912 164 2 2 chrX 34890608 34891223 -131759073 + Lx LINE L1 5849 6463 -191 1 851 262 221 35 26 chrX 34891326 34891442 -131758854 + (TTATA)n Simple_repeat Simple_repeat 3 119 0 1 851 692 252 42 76 chrX 34891548 34891810 -131758486 - Lx6 LINE L1 0 7460 7208 1 851 501 223 18 0 chrX 34891834 34891946 -131758350 + B3 SINE B2 76 189 -27 1 851 21 36 0 0 chrX 34892348 34892376 -131757920 + AT_rich Low_complexity Low_complexity 1 28 0 1 851 803 212 46 8 chrX 34892402 34892615 -131757681 - Lx4B LINE L1 -212 6796 6583 1 851 319 261 36 36 chrX 34892785 34892924 -131757372 + L1_Rod LINE L1 4235 4373 -1474 1 851 776 135 53 77 chrX 34892927 34893096 -131757200 + B2_Mm2 SINE B2 4 168 -27 1 851 809 244 49 55 chrX 34893102 34893446 -131756850 + L1_Rod LINE L1 5239 5607 -693 1 851 277 115 15 62 chrX 34893448 34893513 -131756783 + B1_Mus2 SINE Alu 86 147 0 1 851 251 73 49 0 chrX 34893547 34893588 -131756708 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 1 851 378 246 50 25 chrX 34894373 34894494 -131755802 - B1_Mur2 SINE Alu -8 141 18 1 851 257 0 0 29 chrX 34895200 34895234 -131755062 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 851 236 274 105 0 chrX 34895775 34895870 -131754426 - RSINE1 SINE B4 -13 152 48 1 851 427 215 0 0 chrX 34896059 34896152 -131754144 + MTC LTR MaLR 1 93 -328 1 851 568 229 0 24 chrX 34896174 34896299 -131753997 + B3 SINE B2 9 130 -86 1 851 1467 204 66 3 chrX 34896360 34896680 -131753616 + MTC LTR MaLR 82 421 0 1 851 243 0 0 0 chrX 34896843 34896870 -131753426 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 851 303 175 0 0 chrX 34896914 34896971 -131753325 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 851 380 209 34 103 chrX 34896983 34897100 -131753196 + MT2B LTR ERVL 149 257 -344 1 851 888 122 0 0 chrX 34897006 34897145 -131753151 + B1_Mus2 SINE Alu 9 147 0 1 851 450 127 0 0 chrX 34897145 34897216 -131753080 + (GAAAA)n Simple_repeat Simple_repeat 4 74 0 1 851 869 216 200 57 chrX 34897464 34897779 -131752517 - ORR1D1 LTR MaLR 0 374 15 1 851 576 176 0 0 chrX 34897826 34897928 -131752368 - B1_Mur4 SINE Alu -24 126 25 1 851 415 234 182 31 chrX 34898293 34898452 -131751844 - B3A SINE B2 -15 183 1 1 851 21 0 0 0 chrX 34898763 34898784 -131751512 + AT_rich Low_complexity Low_complexity 1 21 0 1 851 853 297 43 13 chrX 34900255 34900637 -131749659 + L1_Mur3 LINE L1 4931 5323 -554 1 851 324 372 40 0 chrX 34900647 34900795 -131749501 + Lx8 LINE L1 7079 7232 -241 1 851 33734 22 2 0 chrX 34900855 34904754 -131745542 + L1Md_T LINE L1 1679 5586 -297 1 851 7907 43 0 74 chrX 34904754 34905830 -131744466 + L1Md_T LINE L1 5587 6582 0 1 851 574 346 43 23 chrX 34905910 34906212 -131744084 + Lx8 LINE L1 7079 7386 -87 1 851 344 316 27 66 chrX 34906444 34906627 -131743669 - ID_B1 SINE B4 -45 179 4 1 851 744 161 0 0 chrX 34906931 34907074 -131743222 + (CA)n Simple_repeat Simple_repeat 2 144 0 1 851 390 21 0 0 chrX 34907164 34907211 -131743085 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 851 542 28 14 0 chrX 34908735 34908807 -131741489 + (TC)n Simple_repeat Simple_repeat 2 74 0 1 851 275 312 110 16 chrX 34908848 34908975 -131741321 - RSINE1 SINE B4 -2 163 25 1 851 743 186 21 0 chrX 34910933 34911078 -131739218 - B1_Mur4 SINE Alu -1 149 2 1 851 595 337 72 19 chrX 34911459 34911881 -131738415 - Lx8 LINE L1 -628 7068 6616 1 851 265 255 75 47 chrX 34913094 34913201 -131737095 + ID_B1 SINE B4 104 213 -11 1 851 565 258 52 15 chrX 34913429 34913640 -131736656 + B3A SINE B2 3 216 0 1 851 275 319 65 32 chrX 34913648 34913771 -131736525 + B3A SINE B2 28 154 -44 1 851 252 0 0 0 chrX 34913772 34913800 -131736496 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 851 2879 95 10 0 chrX 34914003 34914403 -131735893 - L1Md_F2 LINE L1 -5 6577 6174 1 851 30 27 0 0 chrX 34914772 34914809 -131735487 + AT_rich Low_complexity Low_complexity 1 37 0 1 851 344 250 132 19 chrX 34914823 34914929 -131735367 + RSINE1 SINE B4 12 129 -36 1 851 249 226 0 0 chrX 34915254 34915307 -131734989 + L1M4 LINE L1 1410 1462 -5080 1 851 236 245 0 0 chrX 34915502 34915555 -131734741 + L1M4 LINE L1 1410 1462 -5080 1 851 292 163 0 0 chrX 34915564 34915613 -131734683 + L1M4 LINE L1 1410 1458 -5084 1 851 463 345 21 0 chrX 34915692 34915834 -131734462 + RSINE1 SINE B4 2 146 -19 1 851 23 33 0 0 chrX 34915850 34915880 -131734416 + AT_rich Low_complexity Low_complexity 1 30 0 1 851 26 30 0 0 chrX 34916437 34916470 -131733826 + AT_rich Low_complexity Low_complexity 1 33 0 1 851 221 264 0 0 chrX 34916848 34916901 -131733395 - ID SINE ID -170 54 2 1 851 429 20 0 0 chrX 34917292 34917342 -131732954 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 851 1310 197 9 93 chrX 34917592 34917916 -131732380 - ORR1D1 LTR MaLR -77 297 1 1 851 369 331 12 6 chrX 34919321 34919482 -131730814 - RSINE1 SINE B4 -2 163 2 1 851 513 240 31 8 chrX 34919830 34919960 -131730336 - B1F2 SINE Alu -16 133 1 1 851 247 232 70 67 chrX 34920098 34920226 -131730070 - B1_Mur4 SINE Alu -18 132 9 1 851 496 315 0 59 chrX 34920318 34920470 -131729826 + RSINE1 SINE B4 1 143 -22 1 851 443 292 8 9 chrX 34921328 34921474 -131728822 - B3A SINE B2 -63 153 9 1 851 1633 267 66 29 chrX 34923676 34924358 -131725938 + L1_Rod LINE L1 1704 2410 -3437 1 851 367 265 26 0 chrX 34924364 34924515 -131725781 + (CA)n Simple_repeat Simple_repeat 2 156 0 1 851 183 204 0 0 chrX 34924528 34924577 -131725719 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 851 3886 168 2 2 chrX 34924627 34925242 -131725054 + Lx LINE L1 5849 6463 -191 1 851 262 221 35 26 chrX 34925345 34925461 -131724835 + (TTATA)n Simple_repeat Simple_repeat 3 119 0 1 851 698 260 42 69 chrX 34925567 34925827 -131724469 - Lx6 LINE L1 0 7460 7208 1 851 481 232 18 0 chrX 34925851 34925963 -131724333 + B3 SINE B2 76 189 -27 1 851 21 36 0 0 chrX 34926365 34926393 -131723903 + AT_rich Low_complexity Low_complexity 1 28 0 1 851 825 205 46 7 chrX 34926436 34926632 -131723664 - Lx4B LINE L1 -274 6784 6583 1 851 339 240 16 31 chrX 34926805 34926934 -131723362 + L1M3 LINE L1 4273 4399 -1741 1 851 778 142 35 88 chrX 34926941 34927111 -131723185 + B2_Mm2 SINE B2 4 164 -31 1 851 787 228 116 58 chrX 34927112 34927456 -131722840 + L1_Rod LINE L1 5174 5537 -310 1 851 277 115 15 62 chrX 34927467 34927532 -131722764 + B1_Mus2 SINE Alu 86 147 0 1 851 218 98 49 0 chrX 34927566 34927607 -131722689 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 1 851 378 254 47 22 chrX 34928391 34928530 -131721766 - B1_Mur2 SINE Alu -8 142 1 1 851 185 0 0 39 chrX 34929254 34929280 -131721016 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 851 244 275 22 11 chrX 34929829 34929921 -131720375 - RSINE1 SINE B4 -25 140 48 1 851 404 226 0 0 chrX 34930110 34930203 -131720093 + MTC LTR MaLR 1 93 -328 1 851 559 237 0 0 chrX 34930236 34930350 -131719946 + B3 SINE B2 17 130 -86 1 851 1422 193 75 6 chrX 34930411 34930729 -131719567 + MTC LTR MaLR 82 421 0 1 851 207 0 0 0 chrX 34930893 34930916 -131719380 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 851 492 99 0 0 chrX 34930960 34931031 -131719265 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 851 940 101 0 0 chrX 34931066 34931205 -131719091 + B1_Mus2 SINE Alu 9 147 0 1 851 338 115 16 0 chrX 34931205 34931266 -131719030 + (GAAAA)n Simple_repeat Simple_repeat 3 64 0 1 851 920 202 200 57 chrX 34931514 34931829 -131718467 - ORR1D1 LTR MaLR 0 374 15 1 851 552 182 0 0 chrX 34931879 34931978 -131718318 - B1_Mur4 SINE Alu -27 123 25 1 851 422 227 182 31 chrX 34932343 34932502 -131717794 - B3A SINE B2 -15 183 1 1 851 925 307 18 10 chrX 34934306 34934691 -131715605 + L1_Mur3 LINE L1 4931 5318 -562 1 851 408 359 78 16 chrX 34934707 34935078 -131715218 + Lx8 LINE L1 7079 7472 -1 1 851 364 310 27 66 chrX 34935243 34935426 -131714870 - ID_B1 SINE B4 -45 179 4 1 851 576 164 0 0 chrX 34935735 34935845 -131714451 + (TA)n Simple_repeat Simple_repeat 2 111 0 1 851 307 318 19 9 chrX 34936000 34936108 -131714188 - RSINE1 SINE B4 -2 163 55 1 851 1059 8 0 0 chrX 34937248 34937372 -131712924 - L1_Mm LINE L1 -2680 3203 3080 1 851 5924 5 0 0 chrX 34937369 34938020 -131712276 + L1Md_A LINE L1 4936 5586 -297 1 851 9195 2 0 0 chrX 34938021 34939015 -131711281 + L1Md_A LINE L1 5588 6581 -1 1 851 366 23 0 0 chrX 34939733 34939776 -131710520 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1 851 201 74 0 0 chrX 34939776 34939803 -131710493 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 851 1090 258 94 47 chrX 34939995 34940495 -131709801 - Lx7 LINE L1 -1743 5953 5398 1 851 225 0 0 0 chrX 34940558 34940583 -131709713 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1 851 21 0 0 0 chrX 34942089 34942110 -131708186 + AT_rich Low_complexity Low_complexity 1 21 0 1 851 428 227 182 31 chrX 34942422 34942581 -131707715 + B3A SINE B2 1 183 -15 1 851 21 36 0 0 chrX 34942598 34942626 -131707670 + AT_rich Low_complexity Low_complexity 1 28 0 1 851 192 111 0 0 chrX 34942650 34942686 -131707610 + (CCA)n Simple_repeat Simple_repeat 3 38 0 1 851 483 312 15 5 chrX 34942856 34943062 -131707234 + L1_Mur3 LINE L1 5117 5324 -556 1 851 297 392 73 11 chrX 34943072 34943443 -131706853 + Lx8 LINE L1 7079 7472 -1 1 851 378 300 29 70 chrX 34943617 34943789 -131706507 - ID_B1 SINE B4 -56 168 4 1 851 208 255 0 0 chrX 34944085 34944132 -131706164 + (CATATA)n Simple_repeat Simple_repeat 6 52 0 1 851 324 0 0 0 chrX 34944221 34944257 -131706039 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 851 22 35 0 0 chrX 34945736 34945765 -131704531 + AT_rich Low_complexity Low_complexity 1 29 0 1 851 345 47 0 0 chrX 34945784 34945827 -131704469 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 851 360 77 0 0 chrX 34945827 34945878 -131704418 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 851 351 297 85 15 chrX 34945894 34946024 -131704272 - RSINE1 SINE B4 -2 163 25 1 851 39818 54 11 4 chrX 34946511 34953081 -131697215 - L1Md_T LINE L1 0 6582 99 1 851 272 304 144 0 chrX 34953150 34953275 -131697021 + RSINE1 SINE B4 12 154 -11 1 851 22 35 0 0 chrX 34953994 34954023 -131696273 + AT_rich Low_complexity Low_complexity 1 29 0 1 851 180 200 0 0 chrX 34954910 34954955 -131695341 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 851 754 179 21 0 chrX 34954997 34955142 -131695154 - B1_Mur4 SINE Alu -1 149 2 1 851 228 300 0 0 chrX 34955438 34955498 -131694798 - Lx8 LINE L1 -121 7352 7293 1 851 489 17 0 0 chrX 34955507 34955565 -131694731 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 851 654 340 81 29 chrX 34955571 34955980 -131694316 - Lx8 LINE L1 -642 7054 6616 1 851 265 255 75 47 chrX 34957169 34957276 -131693020 + ID_B1 SINE B4 104 213 -11 1 851 588 279 43 12 chrX 34957506 34957718 -131692578 + B3A SINE B2 3 216 0 1 851 279 328 65 32 chrX 34957726 34957849 -131692447 + B3A SINE B2 28 154 -44 1 851 594 75 0 0 chrX 34957850 34957930 -131692366 + (CA)n Simple_repeat Simple_repeat 2 81 0 1 851 31 26 0 0 chrX 34958290 34958328 -131691968 + AT_rich Low_complexity Low_complexity 1 38 0 1 851 362 274 122 17 chrX 34958333 34958448 -131691848 + RSINE1 SINE B4 3 129 -36 1 851 236 245 0 0 chrX 34958587 34958640 -131691656 + L1M4 LINE L1 1410 1462 -5080 1 851 236 245 0 0 chrX 34958649 34958702 -131691594 + L1M4 LINE L1 1410 1462 -5080 1 851 246 178 0 0 chrX 34958715 34958760 -131691536 + L1M4 LINE L1 1414 1458 -5084 1 851 463 345 21 0 chrX 34958839 34958981 -131691315 + RSINE1 SINE B4 2 146 -19 1 851 23 33 0 0 chrX 34958997 34959027 -131691269 + AT_rich Low_complexity Low_complexity 1 30 0 1 851 26 30 0 0 chrX 34959585 34959618 -131690678 + AT_rich Low_complexity Low_complexity 1 33 0 1 851 221 264 0 0 chrX 34959996 34960049 -131690247 - ID SINE ID -170 54 2 1 851 306 0 0 0 chrX 34960440 34960474 -131689822 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 851 1319 194 9 93 chrX 34960724 34961048 -131689248 - ORR1D1 LTR MaLR -77 297 1 1 851 395 325 12 6 chrX 34962451 34962612 -131687684 - RSINE1 SINE B4 -2 163 2 1 851 510 240 31 8 chrX 34962960 34963090 -131687206 - B1F2 SINE Alu -16 133 1 1 851 254 261 62 102 chrX 34963230 34963358 -131686938 - B1_Mur4 SINE Alu -18 132 10 1 851 496 315 0 59 chrX 34963450 34963602 -131686694 + RSINE1 SINE B4 1 143 -22 1 851 456 331 7 7 chrX 34964420 34964563 -131685733 - B3A SINE B2 -47 151 9 1 851 1671 271 57 30 chrX 34966760 34967449 -131682847 + L1_Rod LINE L1 1704 2410 -3437 1 851 367 265 26 0 chrX 34967455 34967606 -131682690 + (CA)n Simple_repeat Simple_repeat 2 156 0 1 851 183 204 0 0 chrX 34967619 34967668 -131682628 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 851 3920 164 2 2 chrX 34967718 34968333 -131681963 + Lx LINE L1 5849 6463 -191 1 851 262 221 35 26 chrX 34968436 34968552 -131681744 + (TTATA)n Simple_repeat Simple_repeat 3 119 0 1 851 698 260 42 69 chrX 34968658 34968918 -131681378 - Lx6 LINE L1 0 7460 7208 1 851 481 232 18 0 chrX 34968942 34969054 -131681242 + B3 SINE B2 76 189 -27 1 851 807 210 46 7 chrX 34969527 34969723 -131680573 - Lx4B LINE L1 -274 6784 6583 1 851 346 252 15 30 chrX 34969896 34970031 -131680265 + L1M3 LINE L1 4273 4405 -1735 1 851 780 122 53 82 chrX 34970036 34970206 -131680090 + B2_Mm2 SINE B2 4 168 -27 1 851 738 238 117 53 chrX 34970206 34970548 -131679748 + L1_Rod LINE L1 5174 5537 -310 1 851 248 169 17 17 chrX 34970559 34970619 -131679677 + B1_Mus2 SINE Alu 86 145 -2 1 851 230 98 49 0 chrX 34970650 34970691 -131679605 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 1 851 378 254 47 22 chrX 34971465 34971604 -131678692 - B1_Mur2 SINE Alu -8 142 1 1 851 185 0 0 39 chrX 34972349 34972375 -131677921 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 851 227 263 105 0 chrX 34972921 34973016 -131677280 - RSINE1 SINE B4 -13 152 48 1 851 404 226 0 0 chrX 34973205 34973298 -131676998 + MTC LTR MaLR 1 93 -328 1 851 559 237 0 0 chrX 34973331 34973445 -131676851 + B3 SINE B2 17 130 -86 1 851 1428 199 72 3 chrX 34973506 34973824 -131676472 + MTC LTR MaLR 82 421 0 1 851 333 118 0 0 chrX 34974047 34974098 -131676198 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 851 351 228 31 116 chrX 34974112 34974241 -131676055 + MT2B LTR ERVL 151 268 -333 1 851 941 101 0 0 chrX 34974133 34974272 -131676024 + B1_Mus2 SINE Alu 9 147 0 1 851 302 123 18 0 chrX 34974279 34974336 -131675960 + (GAAAA)n Simple_repeat Simple_repeat 2 59 0 1 851 930 199 200 57 chrX 34974584 34974899 -131675397 - ORR1D1 LTR MaLR 0 374 15 1 851 552 182 0 0 chrX 34974949 34975048 -131675248 - B1_Mur4 SINE Alu -27 123 25 1 851 438 227 182 31 chrX 34975412 34975571 -131674725 - B3A SINE B2 -15 183 1 1 851 453 36 0 0 chrX 34975804 34975859 -131674437 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 851 945 299 18 10 chrX 34977414 34977799 -131672497 + L1_Mur3 LINE L1 4931 5318 -562 1 851 384 393 50 0 chrX 34977815 34978133 -131672163 + Lx8 LINE L1 7079 7412 -61 1 851 368 301 45 67 chrX 34978357 34978535 -131671761 - ID_B1 SINE B4 -47 177 4 1 851 847 177 90 17 chrX 34978776 34978954 -131671342 + ORR1C2 LTR MaLR 191 381 -3 1 851 882 226 37 5 chrX 34978958 34979149 -131671147 - B3 SINE B2 -18 198 2 1 851 444 37 0 0 chrX 34980652 34980706 -131669590 + (TATG)n Simple_repeat Simple_repeat 3 56 0 1 851 294 29 0 0 chrX 34980741 34980776 -131669520 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 851 1043 262 98 60 chrX 34980906 34981422 -131668874 - Lx7 LINE L1 -1731 5965 5398 1 851 333 0 0 0 chrX 34981485 34981522 -131668774 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1 851 404 242 178 25 chrX 34983368 34983525 -131666771 + B3A SINE B2 3 183 -15 1 851 455 315 15 5 chrX 34983800 34984004 -131666292 + L1_Mur3 LINE L1 5117 5322 -558 1 851 383 375 70 11 chrX 34984016 34984388 -131665908 + Lx8 LINE L1 7079 7472 -1 1 851 342 332 41 60 chrX 34984515 34984733 -131665563 - ID_B1 SINE B4 -7 217 4 1 851 288 0 0 0 chrX 34985178 34985210 -131665086 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 851 297 0 0 0 chrX 34986738 34986771 -131663525 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 851 300 27 0 0 chrX 34986771 34986807 -131663489 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 851 351 297 85 15 chrX 34986832 34986962 -131663334 - RSINE1 SINE B4 -2 163 25 1 851 266 318 143 0 chrX 34987495 34987621 -131662675 + RSINE1 SINE B4 12 155 -10 1 851 23 33 0 0 chrX 34988341 34988371 -131661925 + AT_rich Low_complexity Low_complexity 1 30 0 1 851 206 217 0 14 chrX 34989232 34989302 -131660994 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 851 734 192 20 0 chrX 34989343 34989489 -131660807 - B1_Mur4 SINE Alu 0 150 2 1 851 447 35 0 0 chrX 34989857 34989914 -131660382 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 851 750 324 77 30 chrX 34989966 34990329 -131659967 - Lx8 LINE L1 -467 7006 6627 1 851 289 245 75 47 chrX 34991521 34991628 -131658668 + ID_B1 SINE B4 104 213 -11 1 851 642 265 40 9 chrX 34991859 34992071 -131658225 + B3A SINE B2 3 216 0 1 851 252 328 65 32 chrX 34992079 34992202 -131658094 + B3A SINE B2 28 154 -44 1 851 459 78 0 0 chrX 34992203 34992267 -131658029 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 851 31 26 0 0 chrX 34992626 34992664 -131657632 + AT_rich Low_complexity Low_complexity 1 38 0 1 851 377 266 122 17 chrX 34992669 34992784 -131657512 + RSINE1 SINE B4 3 129 -36 1 851 236 245 0 0 chrX 34992924 34992977 -131657319 + L1M4 LINE L1 1410 1462 -5080 1 851 236 245 0 0 chrX 34993048 34993101 -131657195 + L1M4 LINE L1 1410 1462 -5080 1 851 278 175 0 17 chrX 34993110 34993168 -131657128 + L1M4 LINE L1 1410 1466 -5076 1 851 433 352 21 0 chrX 34993238 34993380 -131656916 + RSINE1 SINE B4 2 146 -19 1 851 23 33 0 0 chrX 34993396 34993426 -131656870 + AT_rich Low_complexity Low_complexity 1 30 0 1 851 221 264 0 0 chrX 34994393 34994446 -131655850 - ID SINE ID -170 54 2 1 851 387 0 0 0 chrX 34994809 34994852 -131655444 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 851 1299 209 9 88 chrX 34995087 34995425 -131654871 - ORR1D1 LTR MaLR -77 297 1 1 852 378 335 13 7 chrX 34996828 34996981 -131653315 - RSINE1 SINE B4 -2 163 10 1 852 497 248 31 8 chrX 34997337 34997467 -131652829 - B1F2 SINE Alu -16 133 1 1 852 236 244 62 102 chrX 34997606 34997734 -131652562 - B1_Mur4 SINE Alu -18 132 10 1 852 487 325 6 94 chrX 34997826 34998006 -131652290 + RSINE1 SINE B4 1 164 -1 1 852 228 330 21 31 chrX 34998707 34998804 -131651492 - B3 SINE B2 -25 191 96 1 852 449 287 8 8 chrX 34998848 34998978 -131651318 - B3A SINE B2 -60 138 9 1 852 1666 276 47 28 chrX 35001166 35001866 -131648430 + L1_Rod LINE L1 1704 2410 -3437 1 852 198 71 0 0 chrX 35001866 35001894 -131648402 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 852 421 292 93 77 chrX 35001894 35002022 -131648274 + L1_Rod LINE L1 2402 2537 -3349 1 852 183 204 0 0 chrX 35002036 35002085 -131648211 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 852 4023 164 2 5 chrX 35002236 35002875 -131647421 + Lx LINE L1 5826 6462 -192 4 852 264 208 33 59 chrX 35002942 35003095 -131647201 + (TTATA)n Simple_repeat Simple_repeat 3 151 0 5 852 756 252 42 69 chrX 35003202 35003462 -131646834 - Lx6 LINE L1 0 7460 7208 6 852 558 234 14 28 chrX 35003486 35003600 -131646696 + B3 SINE B2 76 189 -27 7 852 210 91 0 0 chrX 35003600 35003633 -131646663 + (TG)n Simple_repeat Simple_repeat 2 34 0 8 852 558 234 14 28 chrX 35003633 35003659 -131646637 + B3 SINE B2 190 214 -2 7 852 892 206 12 7 chrX 35004052 35004274 -131646022 - Lx4B LINE L1 -169 6807 6582 9 852 225 0 0 0 chrX 35005566 35005591 -131644705 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1 852 1041 265 100 55 chrX 35005654 35006156 -131644140 + Lx7 LINE L1 5398 5954 -1742 1 852 205 152 0 0 chrX 35006340 35006373 -131643923 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 852 375 78 0 0 chrX 35006373 35006424 -131643872 + (CATA)n Simple_repeat Simple_repeat 2 52 0 1 852 885 221 37 5 chrX 35007928 35008119 -131642177 + B3 SINE B2 2 198 -18 1 852 1623 184 91 39 chrX 35008123 35008485 -131641811 - ORR1C2 LTR MaLR -3 381 1 1 852 25 0 0 0 chrX 35008498 35008523 -131641773 + AT_rich Low_complexity Low_complexity 1 25 0 1 852 771 258 15 25 chrX 35008524 35008727 -131641569 - B3 SINE B2 -15 201 1 1 852 4046 66 4 17 chrX 35009099 35009625 -131640671 + L1Md_F2 LINE L1 6064 6582 0 1 852 378 0 0 0 chrX 35009667 35009709 -131640587 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 852 2626 152 137 65 chrX 35010190 35010832 -131639464 - RMER6C LTR ERVK 0 690 3 2 852 912 77 194 61 chrX 35011619 35011799 -131638497 + RLTR19 LTR ERVK 1 204 -295 2 852 571 244 0 0 chrX 35011800 35011919 -131638377 + RLTR33 LTR ERVK 558 676 -2 2 852 405 0 0 0 chrX 35012032 35012077 -131638219 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 852 767 172 21 0 chrX 35012440 35012585 -131637711 + B1_Mur4 SINE Alu 2 149 -1 2 852 208 305 0 0 chrX 35012587 35012646 -131637650 + (CATATA)n Simple_repeat Simple_repeat 6 64 0 2 852 22 35 0 0 chrX 35013533 35013562 -131636734 + AT_rich Low_complexity Low_complexity 1 29 0 2 852 352 302 77 8 chrX 35014938 35015068 -131635228 + RSINE1 SINE B4 25 163 -2 2 852 245 137 0 38 chrX 35015225 35015278 -131635018 + (TATG)n Simple_repeat Simple_repeat 1 51 0 2 852 285 226 261 0 chrX 35015278 35015393 -131634903 - L1MC4 LINE L1 -1340 6702 6558 2 852 311 328 27 66 chrX 35015660 35015843 -131634453 + ID_B1 SINE B4 4 179 -45 3 852 365 382 67 5 chrX 35016005 35016376 -131633920 - Lx8 LINE L1 -1 7472 7079 3 852 959 300 18 10 chrX 35016386 35016777 -131633519 - L1_Mur3 LINE L1 -556 5324 4931 3 852 444 239 176 25 chrX 35018581 35018740 -131631556 + B3A SINE B2 1 183 -15 3 852 577 162 0 0 chrX 35019104 35019203 -131631093 + B1_Mur4 SINE Alu 25 123 -27 3 852 921 199 200 57 chrX 35019253 35019568 -131630728 + ORR1D1 LTR MaLR 15 374 0 3 852 290 115 19 0 chrX 35019816 35019868 -131630428 + (TTTTC)n Simple_repeat Simple_repeat 2 54 0 3 852 922 93 0 21 chrX 35019869 35020011 -131630285 - B1_Mus2 SINE Alu 0 147 9 3 852 371 197 63 112 chrX 35019903 35020046 -131630250 - MT2B LTR ERVL -333 268 133 3 852 411 73 0 0 chrX 35020046 35020101 -131630195 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 852 210 37 0 0 chrX 35020145 35020172 -131630124 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 852 1461 193 73 3 chrX 35020336 35020653 -131629643 - MTC LTR MaLR -1 420 82 4 852 553 246 0 0 chrX 35020714 35020828 -131629468 - B3 SINE B2 -86 130 17 4 852 451 204 0 0 chrX 35020861 35020954 -131629342 - MTC LTR MaLR -328 93 1 4 852 240 263 105 0 chrX 35021143 35021238 -131629058 + RSINE1 SINE B4 48 152 -13 4 852 185 0 0 39 chrX 35021784 35021810 -131628486 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 852 378 246 50 25 chrX 35022544 35022665 -131627631 + B1_Mur2 SINE Alu 18 141 -8 4 852 192 152 0 0 chrX 35023453 35023486 -131626810 + T-rich Low_complexity Low_complexity 1 33 0 4 852 241 169 17 17 chrX 35023517 35023577 -131626719 - B1_Mus2 SINE Alu -2 145 86 4 852 807 249 33 43 chrX 35023588 35023890 -131626406 - L1_Rod LINE L1 -310 5537 5239 4 852 821 122 53 77 chrX 35023933 35024102 -131626194 - B2_Mm2 SINE B2 -27 168 4 4 852 376 252 29 29 chrX 35024105 35024244 -131626052 - L1_Rod LINE L1 -1474 4373 4235 4 852 826 205 46 7 chrX 35024413 35024609 -131625687 + Lx4B LINE L1 6583 6784 -274 5 852 501 223 18 0 chrX 35025078 35025190 -131625106 - B3 SINE B2 -27 189 76 5 852 678 264 42 69 chrX 35025214 35025474 -131624822 + Lx6 LINE L1 7208 7460 0 5 852 262 221 35 26 chrX 35025581 35025697 -131624599 + (TATAA)n Simple_repeat Simple_repeat 3 119 0 5 852 2845 188 14 2 chrX 35025800 35026302 -131623994 - Lx LINE L1 -191 6463 5956 5 852 41451 14 4 6 chrX 35026300 35032690 -131617606 - L1Md_A LINE L1 0 6582 214 5 852 911 97 0 0 chrX 35032690 35032814 -131617482 - Lx LINE L1 -682 5972 5849 5 852 183 204 0 0 chrX 35032864 35032913 -131617383 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 852 367 265 26 0 chrX 35032926 35033077 -131617219 + (TG)n Simple_repeat Simple_repeat 2 156 0 5 852 1110 254 59 39 chrX 35033083 35033522 -131616774 - L1_Rod LINE L1 -3437 2410 1963 4 852 290 93 0 36 chrX 35033576 35033632 -131616664 + (CAAAA)n Simple_repeat Simple_repeat 3 56 0 5 852 210 91 0 0 chrX 35033977 35034010 -131616286 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 852 525 248 14 28 chrX 35034164 35034190 -131616106 - B3 SINE B2 -2 214 190 5 852 210 91 0 0 chrX 35034190 35034223 -131616073 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 852 525 248 14 28 chrX 35034223 35034337 -131615959 - B3 SINE B2 -27 189 76 5 852 702 264 42 69 chrX 35034361 35034621 -131615675 + Lx6 LINE L1 7208 7460 0 6 852 279 196 60 40 chrX 35034730 35034879 -131615417 + (TATAA)n Simple_repeat Simple_repeat 2 153 0 6 852 4010 166 5 2 chrX 35034948 35035583 -131614713 - Lx LINE L1 -191 6463 5827 6 852 207 307 17 26 chrX 35035676 35035793 -131614503 + (TATG)n Simple_repeat Simple_repeat 1 116 0 6 852 409 263 29 0 chrX 35035740 35035911 -131614385 + (TG)n Simple_repeat Simple_repeat 2 177 0 6 852 216 67 0 0 chrX 35035931 35035961 -131614335 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 852 1657 276 46 27 chrX 35035967 35036661 -131613635 - L1_Rod LINE L1 -3437 2410 1704 6 852 466 279 8 8 chrX 35038849 35038979 -131611317 + B3A SINE B2 9 138 -60 6 852 214 340 21 31 chrX 35038981 35039078 -131611218 + B3 SINE B2 96 191 -25 6 852 335 230 18 115 chrX 35040695 35040808 -131609488 - RSINE1 SINE B4 -63 102 1 6 852 240 210 106 47 chrX 35040941 35041027 -131609269 + B1_Mur4 SINE Alu 41 132 -18 7 852 466 256 31 8 chrX 35041167 35041297 -131608999 + B1F2 SINE Alu 1 133 -16 7 852 401 304 12 19 chrX 35041645 35041806 -131608490 + RSINE1 SINE B4 2 161 -4 7 852 1346 194 9 93 chrX 35043209 35043533 -131606763 + ORR1D1 LTR MaLR 1 297 -77 7 852 414 0 0 0 chrX 35043783 35043829 -131606467 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 852 221 264 0 0 chrX 35044221 35044274 -131606022 + ID SINE ID 2 54 -170 7 852 23 33 0 0 chrX 35045233 35045263 -131605033 + AT_rich Low_complexity Low_complexity 1 30 0 7 852 416 352 21 0 chrX 35045279 35045421 -131604875 - RSINE1 SINE B4 -19 146 2 7 852 274 184 0 0 chrX 35045499 35045548 -131604748 - L1M4 LINE L1 -5084 1458 1410 7 852 340 313 104 0 chrX 35045750 35045865 -131604431 - RSINE1 SINE B4 -36 129 3 7 852 29 28 0 0 chrX 35045870 35045906 -131604390 + AT_rich Low_complexity Low_complexity 1 36 0 8 852 21 0 0 0 chrX 35046223 35046244 -131604052 + AT_rich Low_complexity Low_complexity 1 21 0 8 852 2930 92 8 0 chrX 35046275 35046677 -131603619 + L1Md_F2 LINE L1 6174 6578 -4 8 852 324 0 0 0 chrX 35046877 35046913 -131603383 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 852 293 325 57 32 chrX 35046914 35047038 -131603258 - B3A SINE B2 -44 154 28 8 852 578 254 52 15 chrX 35047046 35047257 -131603039 - B3A SINE B2 0 216 3 8 852 265 255 75 47 chrX 35047487 35047594 -131602702 - ID_B1 SINE B4 -11 213 104 8 852 14294 71 0 6 chrX 35048259 35051451 -131598845 + L1Md_Gf LINE L1 1 3079 -2807 8 852 6731 34 1 0 chrX 35052611 35053395 -131596901 + L1Md_T LINE L1 5798 6582 0 8 852 740 335 78 25 chrX 35053959 35054380 -131595916 + Lx8 LINE L1 6616 7067 -629 8 852 283 58 77 0 chrX 35054381 35054433 -131595863 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 9 852 757 179 21 0 chrX 35054784 35054929 -131595367 + B1_Mur4 SINE Alu 2 149 -1 9 852 246 304 143 8 chrX 35056233 35056359 -131593937 - RSINE1 SINE B4 -11 154 12 9 852 202 163 0 39 chrX 35056769 35056820 -131593476 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 9 852 368 273 85 15 chrX 35056888 35057018 -131593278 + RSINE1 SINE B4 25 163 -2 9 852 302 294 92 8 chrX 35057034 35057154 -131593142 + HAL1-3A_ME LINE L1 1983 2112 -746 9 852 252 0 0 0 chrX 35058678 35058706 -131591590 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 852 260 150 0 32 chrX 35058795 35058857 -131591439 + (TATG)n Simple_repeat Simple_repeat 1 60 0 9 852 265 307 35 28 chrX 35058857 35059001 -131591295 - L1MC4 LINE L1 -1340 6702 6558 9 852 335 322 27 66 chrX 35059267 35059450 -131590846 + ID_B1 SINE B4 4 179 -45 9 852 496 359 64 12 chrX 35059665 35059995 -131590301 - Lx8 LINE L1 -61 7412 7066 1 852 915 299 17 15 chrX 35059996 35060384 -131589912 - L1_Mur3 LINE L1 -559 5327 4931 1 852 488 225 172 36 chrX 35062185 35062366 -131587930 + B3A SINE B2 1 213 -3 1 852 571 172 0 0 chrX 35062725 35062824 -131587472 + B1_Mur4 SINE Alu 25 123 -27 1 852 869 212 200 57 chrX 35062874 35063189 -131587107 + ORR1D1 LTR MaLR 15 374 0 1 852 842 98 45 0 chrX 35063472 35063605 -131586691 - B1_Mus2 SINE Alu 0 147 9 1 852 267 189 0 0 chrX 35063638 35063691 -131586605 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 852 1460 207 66 3 chrX 35063921 35064241 -131586055 - MTC LTR MaLR 0 421 82 1 852 553 246 0 0 chrX 35064302 35064416 -131585880 - B3 SINE B2 -86 130 17 1 852 404 226 0 0 chrX 35064449 35064542 -131585754 - MTC LTR MaLR -328 93 1 1 852 224 274 105 0 chrX 35064731 35064826 -131585470 + RSINE1 SINE B4 48 152 -13 1 852 217 0 0 57 chrX 35065367 35065402 -131584894 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 852 378 246 50 25 chrX 35066162 35066283 -131584013 + B1_Mur2 SINE Alu 18 141 -8 1 852 185 111 56 0 chrX 35067067 35067103 -131583193 + T-rich Low_complexity Low_complexity 2 39 0 1 852 278 136 17 17 chrX 35067134 35067194 -131583102 - B1_Mus2 SINE Alu -2 145 86 1 852 772 247 24 64 chrX 35067205 35067489 -131582807 - L1_Rod LINE L1 -310 5537 5266 1 852 477 0 0 0 chrX 35067489 35067542 -131582754 + (TTTC)n Simple_repeat Simple_repeat 2 54 0 1 852 772 247 24 64 chrX 35067542 35067555 -131582741 - L1_Rod LINE L1 -582 5265 5253 1 852 820 103 59 83 chrX 35067588 35067757 -131582539 - B2_Mm2 SINE B2 -27 168 4 1 852 357 252 29 29 chrX 35067760 35067899 -131582397 - L1_Rod LINE L1 -1474 4373 4235 1 852 916 203 11 7 chrX 35068069 35068271 -131582025 + Lx4B LINE L1 6583 6784 -274 1 852 213 39 0 0 chrX 35068719 35068745 -131581551 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 852 438 234 27 9 chrX 35068747 35068859 -131581437 - B3 SINE B2 -27 189 76 1 852 757 267 23 50 chrX 35068883 35069143 -131581153 + Lx6 LINE L1 7208 7460 0 1 852 22 88 0 0 chrX 35069207 35069264 -131581032 + AT_rich Low_complexity Low_complexity 1 57 0 1 852 227 202 26 68 chrX 35069279 35069396 -131580900 + (TATAA)n Simple_repeat Simple_repeat 5 116 0 1 852 3677 173 11 2 chrX 35069463 35070072 -131580224 - Lx LINE L1 -191 6463 5849 1 852 204 184 0 0 chrX 35070122 35070171 -131580125 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 852 231 214 0 0 chrX 35070267 35070337 -131579959 + (TG)n Simple_repeat Simple_repeat 2 71 0 1 852 1707 266 49 30 chrX 35070347 35071037 -131579259 - L1_Rod LINE L1 -3441 2406 1704 1 852 466 271 8 8 chrX 35073221 35073351 -131576945 + B3A SINE B2 9 138 -60 1 852 420 312 13 60 chrX 35074182 35074332 -131575964 - RSINE1 SINE B4 -22 143 1 1 852 236 210 106 47 chrX 35074466 35074552 -131575744 + B1_Mur4 SINE Alu 41 132 -18 1 852 501 222 55 8 chrX 35074692 35074819 -131575477 + B1_Mur1 SINE Alu 1 133 -16 1 852 397 316 13 7 chrX 35075175 35075328 -131574968 + RSINE1 SINE B4 10 163 -2 1 852 1346 197 9 93 chrX 35076731 35077055 -131573241 + ORR1D1 LTR MaLR 1 297 -77 1 852 474 33 0 0 chrX 35077305 35077365 -131572931 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 852 221 264 0 0 chrX 35077755 35077808 -131572488 + ID SINE ID 2 54 -170 1 852 26 30 0 0 chrX 35078186 35078219 -131572077 + AT_rich Low_complexity Low_complexity 1 33 0 1 852 23 33 0 0 chrX 35078775 35078805 -131571491 + AT_rich Low_complexity Low_complexity 1 30 0 1 852 418 304 27 0 chrX 35078846 35078958 -131571338 - RSINE1 SINE B4 -49 116 2 1 852 274 184 0 0 chrX 35079037 35079086 -131571210 - L1M4 LINE L1 -5084 1458 1410 1 852 236 245 0 0 chrX 35079095 35079148 -131571148 - L1M4 LINE L1 -5080 1462 1410 1 852 231 245 0 0 chrX 35079281 35079334 -131570962 - L1M4 LINE L1 -5080 1462 1410 1 852 236 245 0 0 chrX 35079839 35079892 -131570404 - L1M4 LINE L1 -5080 1462 1410 1 852 231 245 0 0 chrX 35080025 35080078 -131570218 - L1M4 LINE L1 -5080 1462 1410 1 852 351 274 122 17 chrX 35080775 35080890 -131569406 - RSINE1 SINE B4 -36 129 3 1 852 29 28 0 0 chrX 35080895 35080931 -131569365 + AT_rich Low_complexity Low_complexity 1 36 0 1 852 21 0 0 0 chrX 35081250 35081271 -131569025 + AT_rich Low_complexity Low_complexity 1 21 0 1 852 3036 78 8 0 chrX 35081304 35081703 -131568593 + L1Md_F2 LINE L1 6176 6577 -5 1 852 360 0 0 0 chrX 35081906 35081946 -131568350 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 852 286 325 57 32 chrX 35081947 35082071 -131568225 - B3A SINE B2 -44 154 28 1 852 574 251 49 6 chrX 35082126 35082290 -131568006 - B3A SINE B2 -25 173 3 1 852 265 255 75 47 chrX 35082520 35082627 -131567669 - ID_B1 SINE B4 -11 213 104 1 852 579 345 76 14 chrX 35083840 35084261 -131566035 + Lx8 LINE L1 6616 7068 -628 1 852 191 105 53 0 chrX 35084263 35084301 -131565995 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 1 852 710 191 50 0 chrX 35084651 35084792 -131565504 + B1_Mur4 SINE Alu 2 149 -1 1 852 21 0 0 0 chrX 35086661 35086682 -131563614 + AT_rich Low_complexity Low_complexity 1 21 0 1 852 337 281 85 15 chrX 35086738 35086868 -131563428 + RSINE1 SINE B4 25 163 -2 1 852 573 52 0 0 chrX 35086897 35086974 -131563322 + (GA)n Simple_repeat Simple_repeat 2 78 0 1 852 338 0 24 0 chrX 35088501 35088543 -131561753 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 852 478 43 29 0 chrX 35088660 35088729 -131561567 + (TA)n Simple_repeat Simple_repeat 1 71 0 1 852 347 322 27 66 chrX 35089027 35089210 -131561086 + ID_B1 SINE B4 4 179 -45 1 852 563 353 71 7 chrX 35089458 35089755 -131560541 - Lx8 LINE L1 -93 7380 7065 1 852 872 308 23 15 chrX 35089755 35090144 -131560152 - L1_Mur3 LINE L1 -558 5322 4931 1 852 23 33 0 0 chrX 35091081 35091111 -131559185 + AT_rich Low_complexity Low_complexity 1 30 0 1 852 219 360 41 41 chrX 35091630 35091775 -131558521 + B3 SINE B2 11 155 -61 1 852 387 0 0 0 chrX 35091787 35091830 -131558466 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 852 459 0 0 0 chrX 35091830 35091880 -131558416 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 852 194 0 0 37 chrX 35092908 35092935 -131557361 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 1 852 217 266 165 0 chrX 35092997 35093076 -131557220 - ID_B1 SINE B4 -35 189 98 1 852 262 261 19 35 chrX 35093113 35093212 -131557084 - B1F SINE Alu -17 103 2 1 852 961 61 0 8 chrX 35098331 35098464 -131551832 + B1_Mus1 SINE Alu 17 148 0 1 852 447 106 0 0 chrX 35098464 35098530 -131551766 + (GAAA)n Simple_repeat Simple_repeat 3 68 0 1 852 1769 195 40 116 chrX 35098700 35099164 -131551132 + RLTR11A2 LTR ERVK 24 449 -78 1 852 271 60 20 20 chrX 35099164 35099215 -131551081 + (TTTG)n Simple_repeat Simple_repeat 1 51 0 1 852 1132 30 0 29 chrX 35099215 35099353 -131550943 - B1_Mm SINE Alu -13 134 1 1 852 1769 195 40 116 chrX 35099353 35099432 -131550864 + RLTR11A2 LTR ERVK 450 526 -1 1 852 21 71 0 0 chrX 35100048 35100090 -131550206 + AT_rich Low_complexity Low_complexity 1 42 0 1 852 456 201 40 73 chrX 35100140 35100290 -131550006 + MYSERV6-int LTR ERVK 6532 6676 -2283 1 852 390 271 40 56 chrX 35100552 35100677 -131549619 + B1_Mur3 SINE Alu 21 143 -6 1 852 21 0 0 0 chrX 35100689 35100710 -131549586 + AT_rich Low_complexity Low_complexity 1 21 0 1 852 333 0 0 0 chrX 35100775 35100812 -131549484 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 1 852 348 258 55 62 chrX 35100813 35100941 -131549355 + B1_Mur4 SINE Alu 19 145 -5 1 852 3109 220 35 84 chrX 35101064 35102106 -131548190 + MYSERV16_I-int LTR ERVK 1 911 -1415 1 852 247 259 58 58 chrX 35102106 35102192 -131548104 + RMER4A LTR ERVK 341 426 -40 1 852 472 175 7 110 chrX 35102192 35102346 -131547950 + MYSERV16_I-int LTR ERVK 1036 1173 -1153 1 852 306 167 0 0 chrX 35102356 35102416 -131547880 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 852 486 79 0 0 chrX 35102407 35102483 -131547813 + (GA)n Simple_repeat Simple_repeat 1 76 0 1 852 1413 164 74 16 chrX 35102497 35102806 -131547490 + MYSERV16_I-int LTR ERVK 1265 1591 -735 1 852 775 138 0 30 chrX 35102806 35102940 -131547356 + B2_Mm2 SINE B2 1 130 -65 1 852 2834 189 43 2 chrX 35102971 35103533 -131546763 + Lx3C LINE L1 6388 6972 -4 1 852 3383 175 69 14 chrX 35103541 35104253 -131546043 + MYSERV16_I-int LTR ERVK 1576 2326 0 1 852 254 228 0 0 chrX 35104324 35104381 -131545915 + RLTR11A2 LTR ERVK 471 527 0 1 852 239 299 67 108 chrX 35104398 35104412 -131545884 + PB1D7 SINE Alu 6 55 -65 1 852 313 289 11 11 chrX 35104412 35104503 -131545793 + ID_B1 SINE B4 106 196 -28 1 852 239 299 67 108 chrX 35104503 35104518 -131545778 + PB1D7 SINE Alu 56 120 0 1 852 210 37 0 0 chrX 35104519 35104546 -131545750 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 1 852 542 170 0 0 chrX 35105623 35105717 -131544579 + RMER15 LTR ERVL 1 94 -481 1 852 1214 265 132 60 chrX 35105867 35106384 -131543912 + Lx8 LINE L1 6474 7027 -446 1 852 2506 171 70 63 chrX 35106385 35106954 -131543342 + RMER15 LTR ERVL 1 573 -2 1 852 4434 180 23 20 chrX 35107814 35108691 -131541605 - RMER19B LTR ERVK 0 902 48 1 852 2734 159 4 38 chrX 35109192 35109720 -131540576 - RLTR28 LTR ERVL -14 510 1 1 852 1043 167 103 0 chrX 35110053 35110257 -131540039 + URR1B DNA MER1_type 1 225 0 1 852 220 173 19 19 chrX 35110530 35110583 -131539713 + T-rich Low_complexity Low_complexity 2 54 0 1 852 385 267 0 0 chrX 35111121 35111211 -131539085 - B3A SINE B2 -108 90 1 1 852 918 154 49 0 chrX 35111234 35111377 -131538919 + B1_Mur4 SINE Alu 1 150 0 1 852 1433 224 81 9 chrX 35111428 35111775 -131538521 + MTD LTR MaLR 45 416 -3 1 852 611 88 11 0 chrX 35112471 35112562 -131537734 + (GA)n Simple_repeat Simple_repeat 2 93 0 1 852 415 214 24 0 chrX 35112566 35112650 -131537646 - B1_Mur1 SINE Alu -2 147 62 1 852 308 43 22 0 chrX 35112651 35112697 -131537599 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 852 707 208 0 23 chrX 35112711 35112839 -131537457 - RSINE1 SINE B4 -31 134 10 1 852 909 253 11 0 chrX 35112978 35113160 -131537136 + B3 SINE B2 4 187 -29 1 852 441 0 0 0 chrX 35113160 35113209 -131537087 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 852 559 260 19 138 chrX 35113209 35113236 -131537060 + B2_Mm2 SINE B2 163 188 -7 2 852 429 95 0 0 chrX 35114851 35114914 -131535382 + (CCA)n Simple_repeat Simple_repeat 1 63 0 2 852 7310 76 23 3 chrX 35115082 35116056 -131534240 - RLTR13D5 LTR ERVK -30 993 1 2 852 529 313 60 40 chrX 35116056 35116440 -131533856 + MER31A LTR ERV1 40 415 -70 2 852 653 225 144 17 chrX 35116799 35116980 -131533316 - B3 SINE B2 -11 205 2 2 852 455 262 78 42 chrX 35117085 35117252 -131533044 - RLTR41 LTR ERV1 -1 445 273 2 852 240 265 14 56 chrX 35117769 35117841 -131532455 + B4A SINE B4 78 146 -146 2 853 942 139 0 20 chrX 35169824 35169971 -131480325 - B1_Mur4 SINE Alu -1 149 6 2 853 836 151 14 14 chrX 35173074 35173222 -131477074 + B1_Mus1 SINE Alu 1 148 0 2 853 592 294 118 27 chrX 35173319 35173581 -131476715 + RMER15 LTR ERVL 275 560 -15 2 853 324 0 0 0 chrX 35174040 35174076 -131476220 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 853 246 148 0 0 chrX 35174120 35174174 -131476122 + (A)n Simple_repeat Simple_repeat 1 54 0 2 853 467 17 17 0 chrX 35176823 35176883 -131473413 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 853 224 211 0 0 chrX 35176883 35176935 -131473361 + (CAGAGA)n Simple_repeat Simple_repeat 3 54 0 2 853 789 135 53 88 chrX 35177526 35177696 -131472600 + URR1B DNA MER1_type 62 225 0 2 853 1036 89 0 0 chrX 35178920 35179055 -131471241 + B1_Mus1 SINE Alu 2 136 -12 2 853 198 0 0 0 chrX 35179060 35179082 -131471214 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 2 853 230 329 0 0 chrX 35182629 35182699 -131467597 + tRNA-Ala-GCY_ tRNA tRNA 2 71 -4 2 853 1003 118 7 7 chrX 35188361 35188506 -131461790 - B1_Mus2 SINE Alu 0 147 3 2 853 210 398 0 0 chrX 35189815 35189898 -131460398 - ID4 SINE ID 0 83 1 2 853 270 193 0 0 chrX 35190318 35190375 -131459921 + (TG)n Simple_repeat Simple_repeat 1 57 0 2 853 402 79 0 0 chrX 35193361 35193424 -131456872 + (TC)n Simple_repeat Simple_repeat 1 63 0 2 853 189 0 0 0 chrX 35193424 35193445 -131456851 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 853 244 352 59 52 chrX 35193448 35193601 -131456695 - B3A SINE B2 -52 164 11 2 853 375 150 0 48 chrX 35194536 35194620 -131455676 - Lx2A LINE L1 -6 7002 6923 2 853 4950 126 36 5 chrX 35194621 35195396 -131454900 - Lx2A LINE L1 -42 6966 6168 2 853 210 143 0 0 chrX 35195686 35195721 -131454575 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 853 1493 231 81 8 chrX 35195797 35196181 -131454115 + MTD LTR MaLR 12 405 -14 2 853 218 32 32 0 chrX 35196277 35196308 -131453988 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2 853 243 271 52 10 chrX 35196367 35196464 -131453832 - B3A SINE B2 -92 106 6 2 853 315 0 0 0 chrX 35196511 35196546 -131453750 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 853 423 0 0 0 chrX 35196785 35196832 -131453464 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 853 504 329 76 61 chrX 35197004 35197623 -131452673 - Lx9 LINE L1 -43 7601 6974 2 853 1052 96 7 0 chrX 35197658 35197804 -131452492 - B1_Mus1 SINE Alu -1 147 1 2 853 4198 186 42 66 chrX 35197804 35198421 -131451875 - RMER19B LTR ERVK -13 889 243 2 853 465 19 0 0 chrX 35198421 35198475 -131451821 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 2 853 4198 186 42 66 chrX 35198475 35198768 -131451528 - RMER19B LTR ERVK -660 242 2 2 853 273 253 154 0 chrX 35198817 35198908 -131451388 - Lx8 LINE L1 -2 7471 7367 2 853 285 29 0 0 chrX 35198922 35198956 -131451340 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 2 853 483 304 163 9 chrX 35198958 35199035 -131451261 - Lx8 LINE L1 -38 7435 7343 2 853 243 0 0 0 chrX 35199035 35199062 -131451234 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 2 853 483 304 163 9 chrX 35199062 35199316 -131450980 - Lx8 LINE L1 -131 7342 7055 2 853 522 31 0 0 chrX 35199347 35199411 -131450885 + (TC)n Simple_repeat Simple_repeat 1 64 0 2 853 555 66 0 0 chrX 35199411 35199486 -131450810 + (CA)n Simple_repeat Simple_repeat 1 76 0 2 853 325 265 40 10 chrX 35199655 35199754 -131450542 + B3A SINE B2 2 103 -95 2 853 778 98 90 8 chrX 35199981 35200114 -131450182 - BC1_Mm scRNA scRNA -8 144 1 2 853 198 208 0 0 chrX 35200403 35200456 -131449840 + (TCTG)n Simple_repeat Simple_repeat 4 56 0 2 853 435 266 39 31 chrX 35200500 35200628 -131449668 - ID_B1 SINE B4 -5 219 91 2 853 633 86 0 0 chrX 35201421 35201514 -131448782 + (GA)n Simple_repeat Simple_repeat 2 94 0 2 853 367 305 76 0 chrX 35201541 35201659 -131448637 - B4 SINE B4 -4 288 162 2 853 515 306 8 0 chrX 35201659 35201793 -131448503 + RMER15-int LTR ERVL 2006 2140 -2859 2 853 279 191 0 0 chrX 35202383 35202451 -131447845 + GA-rich Low_complexity Low_complexity 1 68 0 2 853 216 158 0 0 chrX 35203111 35203149 -131447147 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2 853 759 212 20 0 chrX 35203271 35203417 -131446879 - Lx5 LINE L1 -94 6956 6808 2 853 464 296 98 61 chrX 35203418 35203663 -131446633 - B4 SINE B4 -37 255 2 2 853 207 69 0 0 chrX 35204653 35204682 -131445614 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2 853 2430 191 17 15 chrX 35204682 35205154 -131445142 - Lx5 LINE L1 -19 7031 6559 2 853 340 247 44 22 chrX 35205404 35205484 -131444812 + MTE2b LTR MaLR 1 82 -297 2 853 368 200 93 0 chrX 35205484 35205559 -131444737 - ORR1D2 LTR MaLR 0 370 289 2 853 264 167 0 0 chrX 35205604 35205652 -131444644 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 2 853 538 188 107 23 chrX 35205954 35206085 -131444211 - ORR1D2 LTR MaLR -74 296 155 2 853 306 276 0 48 chrX 35207830 35207933 -131442363 + RMER10A LTR ERVL 318 415 -27 2 853 720 267 24 53 chrX 35208611 35208781 -131441515 - RSINE1 SINE B4 0 165 1 2 853 530 345 63 15 chrX 35209297 35209568 -131440728 - Lx8 LINE L1 -145 7328 7045 2 853 380 327 42 56 chrX 35210262 35210476 -131439820 + MER102b DNA MER1_type 119 329 -12 2 853 316 71 0 0 chrX 35211485 35211527 -131438769 + MTD LTR MaLR 1 42 -379 2 853 528 216 20 0 chrX 35211552 35211654 -131438642 - B1_Mus1 SINE Alu -44 104 1 2 853 288 77 0 0 chrX 35211671 35211710 -131438586 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 853 243 0 0 0 chrX 35211791 35211818 -131438478 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 853 689 264 47 24 chrX 35211896 35212109 -131438187 - RLTR45 LTR ERVK 0 482 265 2 853 1345 239 0 4 chrX 35212459 35212728 -131437568 + ORR1D1 LTR MaLR 1 268 -106 2 853 1871 216 13 19 chrX 35212766 35213139 -131437157 + MTD LTR MaLR 48 418 -1 2 853 22 35 0 0 chrX 35214524 35214553 -131435743 + AT_rich Low_complexity Low_complexity 1 29 0 2 853 258 32 0 0 chrX 35214620 35214651 -131435645 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 853 282 386 110 0 chrX 35214739 35214768 -131435528 + B4 SINE B4 58 100 -192 2 853 475 243 97 0 chrX 35214768 35214871 -131435425 + B1_Mur1 SINE Alu 2 114 -35 2 853 188 35 35 0 chrX 35216274 35216303 -131433993 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 2 853 1748 191 71 39 chrX 35216471 35216879 -131433417 - MTC LTR MaLR 0 421 1 2 853 891 257 15 0 chrX 35217036 35217238 -131433058 - B3 SINE B2 -7 209 5 2 853 433 180 292 0 chrX 35217716 35217877 -131432419 + Lx9 LINE L1 7427 7634 -10 2 853 788 250 58 14 chrX 35218317 35218524 -131431772 - B3 SINE B2 0 216 1 2 853 433 312 35 28 chrX 35218664 35218806 -131431490 + RSINE1 SINE B4 23 165 0 2 853 184 213 106 0 chrX 35218937 35218984 -131431312 + MIR SINE MIR 94 145 -63 2 853 262 312 13 25 chrX 35219144 35219223 -131431073 - ID4 SINE ID -1 82 5 2 853 5017 86 6 56 chrX 35219721 35220346 -131429950 - MusHAL1 LINE L1 -729 1983 1392 2 853 1062 109 0 0 chrX 35220346 35220493 -131429803 - B1_Mus1 SINE Alu 0 148 2 2 853 5017 86 6 56 chrX 35220493 35220652 -131429644 - MusHAL1 LINE L1 -1321 1391 1238 2 853 5856 147 1 3 chrX 35220653 35221567 -131428729 + Lx LINE L1 5742 6653 -1 2 853 622 13 13 0 chrX 35221737 35221814 -131428482 - B1_Mus2 SINE Alu 0 147 70 2 853 295 193 17 50 chrX 35223957 35224017 -131426279 + B1_Mus1 SINE Alu 4 61 -87 2 853 440 284 36 30 chrX 35224101 35224484 -131425812 - Lx7 LINE L1 -1530 6114 5709 2 853 1132 250 137 19 chrX 35224484 35224843 -131425453 + MTD LTR MaLR 5 405 -14 2 853 264 258 15 0 chrX 35224850 35224916 -131425380 - Lx7 LINE L1 -1951 5745 5679 2 853 426 65 0 0 chrX 35225033 35225095 -131425201 + (T)n Simple_repeat Simple_repeat 1 62 0 2 853 246 264 139 0 chrX 35225095 35225167 -131425129 - ID4 SINE ID 0 83 2 2 853 402 234 63 11 chrX 35225305 35225400 -131424896 - B1_Mur1 SINE Alu -19 130 31 2 853 1020 205 11 0 chrX 35225454 35225644 -131424652 + ID_B1 SINE B4 30 221 -3 2 853 1043 75 0 0 chrX 35227020 35227154 -131423142 + B1_Mus1 SINE Alu 2 135 -13 2 853 282 56 0 0 chrX 35227154 35227190 -131423106 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 2 853 974 282 57 38 chrX 35227228 35227490 -131422806 + B4 SINE B4 1 267 -25 2 853 336 24 0 0 chrX 35227496 35227537 -131422759 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 853 694 203 79 14 chrX 35229139 35229279 -131421017 + B1_Mur2 SINE Alu 1 149 0 2 853 242 56 0 27 chrX 35229756 35229793 -131420503 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 2 853 241 171 85 0 chrX 35230040 35230104 -131420192 + B1_Mur2 SINE Alu 46 114 -6 2 853 195 224 8 49 chrX 35230104 35230226 -131420070 + GA-rich Low_complexity Low_complexity 1 117 0 2 853 271 254 105 48 chrX 35230269 35230393 -131419903 - ID_B1 SINE B4 -4 220 90 3 853 477 92 0 0 chrX 35230400 35230476 -131419820 + (TTTG)n Simple_repeat Simple_repeat 1 76 0 3 853 1389 72 0 0 chrX 35231291 35231640 -131418656 + (TTC)n Simple_repeat Simple_repeat 1 349 0 3 853 2482 46 10 0 chrX 35232784 35233088 -131417208 + L1Md_F3 LINE L1 6275 6581 -3 3 853 384 219 0 0 chrX 35233361 35233434 -131416862 + ID_B1 SINE B4 151 223 -1 3 853 429 153 14 42 chrX 35233480 35233623 -131416673 + (CAGAGA)n Simple_repeat Simple_repeat 6 144 0 3 853 778 98 90 8 chrX 35233949 35234082 -131416214 + BC1_Mm scRNA scRNA 1 144 -8 3 853 325 265 40 10 chrX 35234309 35234408 -131415888 - B3A SINE B2 -95 103 2 3 853 555 66 0 0 chrX 35234577 35234653 -131415643 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 853 522 31 0 0 chrX 35234653 35234716 -131415580 + (GA)n Simple_repeat Simple_repeat 1 64 0 3 853 483 304 163 9 chrX 35234747 35235001 -131415295 + Lx8 LINE L1 7053 7335 -138 3 853 243 0 0 0 chrX 35235001 35235028 -131415268 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 3 853 483 304 163 9 chrX 35235028 35235105 -131415191 + Lx8 LINE L1 7336 7434 -39 3 853 357 24 0 0 chrX 35235107 35235149 -131415147 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 3 853 273 253 154 0 chrX 35235163 35235254 -131415042 + Lx8 LINE L1 7367 7471 -2 3 853 4198 186 42 66 chrX 35235303 35235596 -131414700 + RMER19B LTR ERVK 1 241 -661 3 853 465 19 0 0 chrX 35235596 35235650 -131414646 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 3 853 4198 186 42 66 chrX 35235650 35236267 -131414029 + RMER19B LTR ERVK 242 888 -14 3 853 1052 96 7 0 chrX 35236267 35236413 -131413883 + B1_Mus1 SINE Alu 1 147 -1 3 853 504 329 76 61 chrX 35236448 35237067 -131413229 + Lx9 LINE L1 6974 7601 -43 3 853 423 0 0 0 chrX 35237239 35237286 -131413010 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 853 315 0 0 0 chrX 35237525 35237560 -131412736 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 853 243 271 52 10 chrX 35237607 35237704 -131412592 + B3A SINE B2 6 106 -92 3 853 218 32 32 0 chrX 35237763 35237794 -131412502 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 3 853 1493 231 81 8 chrX 35237890 35238274 -131412022 - MTD LTR MaLR -14 405 12 3 853 210 143 0 0 chrX 35238350 35238385 -131411911 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 853 4950 126 36 5 chrX 35238675 35239450 -131410846 + Lx2A LINE L1 6168 6966 -42 3 853 375 150 0 48 chrX 35239451 35239535 -131410761 + Lx2A LINE L1 6923 7002 -6 3 853 283 345 59 52 chrX 35240469 35240622 -131409674 + B3A SINE B2 11 164 -52 3 853 387 0 0 0 chrX 35240625 35240668 -131409628 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 853 357 75 0 0 chrX 35240668 35240721 -131409575 + (GA)n Simple_repeat Simple_repeat 1 53 0 3 853 230 266 165 0 chrX 35241818 35241897 -131408399 - ID_B1 SINE B4 -35 189 98 3 853 288 266 27 34 chrX 35241919 35242033 -131408263 - B1F SINE Alu -21 128 2 3 853 291 175 0 0 chrX 35244896 35244953 -131405343 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 853 210 398 0 0 chrX 35245374 35245457 -131404839 + ID4 SINE ID 1 83 0 3 853 231 216 75 75 chrX 35245442 35245522 -131404774 + MTC-int LTR MaLR 715 794 -464 3 853 1003 118 7 7 chrX 35246766 35246911 -131403385 + B1_Mus2 SINE Alu 3 147 0 3 853 227 212 35 132 chrX 35250999 35251113 -131399183 - RMER10B LTR ERVL -58 340 238 3 853 360 0 0 0 chrX 35251887 35251927 -131398369 + (GA)n Simple_repeat Simple_repeat 2 41 0 3 853 230 329 0 0 chrX 35252577 35252647 -131397649 - tRNA-Ala-GCY_ tRNA tRNA -4 71 2 3 853 1054 96 0 27 chrX 35256065 35256215 -131394081 - B1_Mus1 SINE Alu -1 147 2 3 853 188 200 71 107 chrX 35257434 35257490 -131392806 - L4 LINE RTE -930 1099 1046 3 854 225 0 0 0 chrX 35258480 35258505 -131391791 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 3 854 406 167 185 42 chrX 35258505 35258624 -131391672 - B2_Mm2 SINE B2 0 195 60 3 854 1348 89 6 0 chrX 35258674 35258853 -131391443 - B2_Mm1t SINE B2 -13 180 1 3 854 320 274 60 18 chrX 35258870 35259037 -131391259 - Lx7 LINE L1 -1578 6118 5945 3 854 216 97 0 0 chrX 35259662 35259693 -131390603 + (CTTG)n Simple_repeat Simple_repeat 1 31 0 3 854 915 159 7 0 chrX 35259699 35259844 -131390452 - B1_Mus1 SINE Alu 0 148 3 3 854 26 0 0 0 chrX 35259879 35259905 -131390391 + AT_rich Low_complexity Low_complexity 1 26 0 3 854 601 332 26 15 chrX 35261349 35261618 -131388678 + RLTR42-int LTR ERVK 1115 1386 -4136 3 854 744 200 22 0 chrX 35261933 35262068 -131388228 - B3 SINE B2 -76 140 3 3 854 244 132 27 68 chrX 35262159 35262206 -131388090 + A-rich Low_complexity Low_complexity 3 49 0 3 854 225 0 0 0 chrX 35262206 35262231 -131388065 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 3 854 244 132 27 68 chrX 35262231 35262256 -131388040 + A-rich Low_complexity Low_complexity 50 72 0 3 854 188 67 33 0 chrX 35262654 35262684 -131387612 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 854 36021 34 0 0 chrX 35262901 35268540 -131381756 + L1Md_T LINE L1 1 5589 -297 3 854 9016 9 3 0 chrX 35268540 35269533 -131380763 + L1Md_T LINE L1 5590 6585 0 3 854 246 95 0 0 chrX 35269537 35269579 -131380717 + (A)n Simple_repeat Simple_repeat 1 42 0 3 854 1035 220 5 9 chrX 35269584 35269795 -131380501 + B3 SINE B2 1 210 -6 3 854 189 0 0 0 chrX 35271161 35271182 -131379114 + (TTA)n Simple_repeat Simple_repeat 2 22 0 3 854 194 0 39 0 chrX 35271285 35271311 -131378985 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 3 854 814 132 0 0 chrX 35271312 35271433 -131378863 - B1_Mus2 SINE Alu -12 135 15 3 854 1999 257 61 22 chrX 35271472 35272049 -131378247 + Lx8 LINE L1 6741 7339 -134 3 854 2823 284 50 13 chrX 35272058 35272984 -131377312 + Lx9 LINE L1 6358 7353 -291 3 854 3392 142 14 7 chrX 35272988 35273562 -131376734 - RMER6A LTR ERVK 0 756 179 3 854 2916 26 3 0 chrX 35273578 35273921 -131376375 - RLTR1C LTR ERV1 -159 344 1 3 854 889 170 24 36 chrX 35273921 35274078 -131376218 - RMER6A LTR ERVK -508 182 28 3 854 394 282 91 62 chrX 35274084 35274360 -131375936 + Lx9 LINE L1 7358 7641 -3 3 854 1168 81 0 0 chrX 35274781 35274929 -131375367 + B1_Mus1 SINE Alu 1 148 0 3 854 406 212 69 55 chrX 35274997 35275142 -131375154 + L1MB4 LINE L1 5449 5595 -585 3 854 268 283 67 86 chrX 35275142 35275351 -131374945 - RLTR21 LTR ERVK -199 1373 1169 3 854 466 350 0 0 chrX 35275362 35275587 -131374709 + (CA)n Simple_repeat Simple_repeat 1 225 0 3 854 302 255 128 24 chrX 35275590 35275780 -131374516 + L1MB4 LINE L1 5659 5846 -332 3 854 288 297 30 23 chrX 35275808 35275939 -131374357 + L1MB4 LINE L1 5839 5970 -210 3 854 1734 158 69 69 chrX 35275952 35276298 -131373998 - ORR1B1 LTR MaLR -8 386 41 3 854 228 303 13 26 chrX 35276675 35276753 -131373543 + ID4_ SINE ID 2 78 -5 3 854 237 271 118 39 chrX 35277760 35277887 -131372409 + MURVY-LTR LTR ERV1 27 163 -356 3 854 494 267 81 7 chrX 35278222 35278358 -131371938 - B1_Mur3 SINE Alu -2 147 2 3 854 940 232 66 0 chrX 35278373 35278571 -131371725 - B3 SINE B2 -5 211 1 3 854 6821 48 0 12 chrX 35278763 35279600 -131370696 - L1Md_F2 LINE L1 0 6582 5756 3 854 6593 108 28 8 chrX 35279601 35280590 -131369706 + RLTR22_Mur LTR ERVK 837 1845 -3 3 854 1605 132 8 4 chrX 35280963 35281222 -131369074 + L1_Mur2 LINE L1 5068 5327 -550 3 854 3336 117 68 27 chrX 35281225 35281654 -131368642 + Lx LINE L1 6077 6518 -136 3 854 231 36 0 0 chrX 35281654 35281682 -131368614 + (TGGG)n Simple_repeat Simple_repeat 2 29 0 3 854 3336 117 68 27 chrX 35281682 35281807 -131368489 + Lx LINE L1 6519 6653 -1 3 854 403 310 78 50 chrX 35281813 35281885 -131368411 + L1MCa LINE L1 2111 2181 -4327 3 854 1112 76 14 0 chrX 35281885 35282030 -131368266 + B1_Mus1 SINE Alu 2 148 0 3 854 403 310 78 50 chrX 35282030 35282137 -131368159 + L1MCa LINE L1 2182 2295 -4213 3 854 270 0 0 0 chrX 35282337 35282367 -131367929 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 854 384 22 0 0 chrX 35282548 35282593 -131367703 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 3 854 3366 56 0 0 chrX 35283224 35283635 -131366661 + L1Md_T LINE L1 6172 6582 0 3 854 21 0 0 0 chrX 35285484 35285505 -131364791 + AT_rich Low_complexity Low_complexity 1 21 0 3 854 404 252 74 9 chrX 35286070 35286178 -131364118 + B1F SINE Alu 25 139 -10 3 854 262 312 13 25 chrX 35287655 35287734 -131362562 + ID4 SINE ID 5 82 -1 3 854 191 213 106 0 chrX 35287894 35287941 -131362355 - MIR SINE MIR -63 145 94 3 854 404 340 14 34 chrX 35288044 35288190 -131362106 - RSINE1 SINE B4 0 165 23 3 854 797 240 58 14 chrX 35288330 35288537 -131361759 + B3 SINE B2 1 216 0 3 854 4785 250 99 61 chrX 35289452 35289722 -131360574 - RMER12 LTR ERVK -289 1033 954 3 854 396 0 0 0 chrX 35289722 35289766 -131360530 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 854 4785 184 50 29 chrX 35289766 35290698 -131359598 - RMER12 LTR ERVK -369 953 1 3 854 4831 196 18 8 chrX 35291056 35291966 -131358330 + RMER12B LTR ERVK 1 919 -485 3 854 403 183 17 126 chrX 35291963 35292082 -131358214 + RLTR21 LTR ERVK 1467 1572 0 3 854 459 0 0 0 chrX 35292447 35292498 -131357798 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 854 2061 146 50 35 chrX 35293303 35293679 -131356617 + ORR1C2 LTR MaLR 3 384 0 3 854 722 278 52 121 chrX 35294239 35294644 -131355652 - MTE2a LTR MaLR -2 377 1 3 854 955 278 163 18 chrX 35294645 35295037 -131355259 - MTE2a-int LTR MaLR -2 1578 1130 3 854 1188 111 11 11 chrX 35295202 35295384 -131354912 - B2_Mm2 SINE B2 -13 182 1 3 854 634 207 20 118 chrX 35295828 35295863 -131354433 - B2_Mm2 SINE B2 -8 187 152 3 854 351 44 0 0 chrX 35295863 35295908 -131354388 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 854 934 217 6 6 chrX 35295908 35296075 -131354221 - B3 SINE B2 -45 171 5 3 854 260 250 203 0 chrX 35296270 35296334 -131353962 - ID4_ SINE ID -3 80 4 3 854 1041 116 0 0 chrX 35296642 35296789 -131353507 + B1_Mus1 SINE Alu 2 148 0 4 854 401 266 65 81 chrX 35296913 35297036 -131353260 + RSINE1 SINE B4 9 129 -36 4 854 474 255 53 20 chrX 35297390 35297542 -131352754 + RSINE1 SINE B4 5 161 -4 4 854 363 253 26 76 chrX 35297649 35297875 -131352421 + L1MB3 LINE L1 5797 6005 -184 4 854 258 202 86 68 chrX 35298181 35298298 -131351998 + B1F1 SINE Alu 18 136 -13 4 854 195 100 0 0 chrX 35299167 35299197 -131351099 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 854 679 240 0 8 chrX 35299198 35299328 -131350968 - RSINE1 SINE B4 -34 131 3 4 854 214 237 220 0 chrX 35299488 35299547 -131350749 - ID4 SINE ID 0 83 12 4 854 1274 259 117 20 chrX 35299763 35300252 -131350044 + L1_Mur3 LINE L1 552 1087 -6625 4 854 2533 153 5 46 chrX 35301944 35302381 -131347915 + MTC LTR MaLR 3 421 0 4 854 1185 46 0 19 chrX 35304206 35304361 -131345935 + L1_Mus1 LINE L1 6415 6566 -1 4 854 555 29 0 0 chrX 35305557 35305626 -131344670 + (CAAAC)n Simple_repeat Simple_repeat 2 70 0 4 854 231 61 0 0 chrX 35306842 35306875 -131343421 + (CAGG)n Simple_repeat Simple_repeat 2 34 0 4 854 243 0 0 0 chrX 35306978 35307005 -131343291 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 854 1757 83 45 0 chrX 35307027 35307269 -131343027 - L1_Mus3 LINE L1 -2 6636 6384 4 854 1189 42 0 0 chrX 35307270 35307413 -131342883 + L1_Mus3 LINE L1 6198 6340 -298 4 854 885 78 15 15 chrX 35309127 35309257 -131341039 + B1_Mus1 SINE Alu 19 148 0 4 854 369 0 0 0 chrX 35309589 35309630 -131340666 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 854 451 185 0 23 chrX 35309630 35309807 -131340489 + (CAGAGA)n Simple_repeat Simple_repeat 6 178 0 4 854 531 158 35 0 chrX 35309786 35309957 -131340339 + (CAGA)n Simple_repeat Simple_repeat 2 178 0 4 854 225 88 70 0 chrX 35309970 35310027 -131340269 + (CAGA)n Simple_repeat Simple_repeat 4 64 0 4 854 213 210 48 0 chrX 35310027 35310089 -131340207 + GA-rich Low_complexity Low_complexity 1 65 0 4 854 421 201 11 11 chrX 35310090 35310266 -131340030 + (CAGAGA)n Simple_repeat Simple_repeat 5 180 0 4 854 281 327 0 0 chrX 35310266 35310416 -131339880 + GA-rich Low_complexity Low_complexity 1 150 0 4 854 338 219 7 18 chrX 35310423 35310711 -131339585 + (CAGAGA)n Simple_repeat Simple_repeat 1 284 0 4 854 325 138 16 65 chrX 35310755 35310879 -131339417 + (CAGAGA)n Simple_repeat Simple_repeat 3 120 0 4 854 195 237 0 0 chrX 35310906 35310999 -131339297 + (CAGAGA)n Simple_repeat Simple_repeat 4 96 0 4 854 186 156 0 0 chrX 35311065 35311110 -131339186 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 854 492 130 10 83 chrX 35311181 35311187 -131339109 + (CAGAGA)n Simple_repeat Simple_repeat 2 7 0 4 854 189 0 0 0 chrX 35311187 35311208 -131339088 + (CAGA)n Simple_repeat Simple_repeat 4 24 0 4 854 492 130 10 83 chrX 35311208 35311394 -131338902 + (CAGAGA)n Simple_repeat Simple_repeat 2 173 0 4 854 307 169 56 0 chrX 35311402 35311473 -131338823 + (CAGA)n Simple_repeat Simple_repeat 3 77 0 4 854 239 168 32 32 chrX 35311477 35311600 -131338696 + (CAGAGA)n Simple_repeat Simple_repeat 4 126 0 4 854 215 204 47 21 chrX 35311608 35311804 -131338492 + (CAGA)n Simple_repeat Simple_repeat 1 201 0 4 854 356 188 38 38 chrX 35311806 35311911 -131338385 + (CAGAGA)n Simple_repeat Simple_repeat 5 109 0 4 854 315 180 72 0 chrX 35311917 35312084 -131338212 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 4 854 229 141 62 0 chrX 35312161 35312225 -131338071 + (CAGA)n Simple_repeat Simple_repeat 2 69 0 4 854 287 151 26 52 chrX 35312229 35312306 -131337990 + (CAGAGA)n Simple_repeat Simple_repeat 2 76 0 4 854 245 150 19 57 chrX 35312330 35312436 -131337860 + (CAGAGA)n Simple_repeat Simple_repeat 1 102 0 4 854 262 175 73 0 chrX 35312445 35312582 -131337714 + (CAGA)n Simple_repeat Simple_repeat 2 148 0 4 854 234 151 30 67 chrX 35312640 35312775 -131337521 + (CAGAGA)n Simple_repeat Simple_repeat 1 130 0 4 854 287 190 26 26 chrX 35312835 35312986 -131337310 + (CAGA)n Simple_repeat Simple_repeat 2 152 0 4 854 339 174 28 75 chrX 35312999 35313437 -131336859 + (CAGAGA)n Simple_repeat Simple_repeat 1 417 0 4 854 463 212 48 34 chrX 35313447 35313926 -131336370 + (CAGA)n Simple_repeat Simple_repeat 1 485 0 4 854 343 157 14 63 chrX 35313956 35314099 -131336197 + (CAGAGA)n Simple_repeat Simple_repeat 1 136 0 4 854 433 218 46 23 chrX 35314119 35314375 -131335921 + (CAGA)n Simple_repeat Simple_repeat 1 261 0 4 854 253 205 36 0 chrX 35314332 35314415 -131335881 + (CAGAGA)n Simple_repeat Simple_repeat 2 87 0 4 854 201 39 0 0 chrX 35314416 35314442 -131335854 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 854 282 299 0 21 chrX 35314483 35314623 -131335673 + (CA)n Simple_repeat Simple_repeat 2 138 0 4 854 472 178 7 7 chrX 35314635 35314782 -131335514 + (CAGA)n Simple_repeat Simple_repeat 2 148 0 4 854 249 289 0 29 chrX 35314785 35314924 -131335372 + (CAGAGA)n Simple_repeat Simple_repeat 4 138 0 4 854 306 212 0 0 chrX 35314933 35315032 -131335264 + GA-rich Low_complexity Low_complexity 2 100 0 4 854 403 307 12 0 chrX 35315032 35315198 -131335098 + (CAGAGA)n Simple_repeat Simple_repeat 1 168 0 4 854 227 211 0 19 chrX 35315212 35315318 -131334978 + (CAGAGA)n Simple_repeat Simple_repeat 5 108 0 4 854 303 247 0 0 chrX 35315365 35315539 -131334757 + (CAGAGA)n Simple_repeat Simple_repeat 4 177 0 4 854 241 246 0 0 chrX 35315550 35315615 -131334681 + GA-rich Low_complexity Low_complexity 1 65 0 4 854 347 226 12 0 chrX 35315621 35315789 -131334507 + (CAGAGA)n Simple_repeat Simple_repeat 2 171 0 4 854 228 262 0 0 chrX 35315841 35316009 -131334287 + (CAGAGA)n Simple_repeat Simple_repeat 4 171 0 4 854 442 262 0 13 chrX 35316023 35316174 -131334122 + (CAGAGA)n Simple_repeat Simple_repeat 2 150 0 4 854 188 266 12 0 chrX 35316191 35316364 -131333932 + (CAGAGA)n Simple_repeat Simple_repeat 6 180 0 4 854 469 272 12 0 chrX 35316390 35316563 -131333733 + (CAGAGA)n Simple_repeat Simple_repeat 3 177 0 4 854 348 253 0 0 chrX 35316585 35316860 -131333436 + GA-rich Low_complexity Low_complexity 1 275 0 4 854 287 236 12 0 chrX 35316863 35317028 -131333268 + (CAGAGA)n Simple_repeat Simple_repeat 2 168 0 4 854 186 174 22 44 chrX 35317102 35317192 -131333104 + (CAGAGA)n Simple_repeat Simple_repeat 3 90 0 4 854 314 240 0 6 chrX 35317219 35317545 -131332751 + (CAGAGA)n Simple_repeat Simple_repeat 1 323 0 4 854 381 249 0 0 chrX 35317567 35317842 -131332454 + GA-rich Low_complexity Low_complexity 1 275 0 4 854 266 242 12 0 chrX 35317845 35318010 -131332286 + (CAGAGA)n Simple_repeat Simple_repeat 2 168 0 4 854 207 163 22 44 chrX 35318084 35318174 -131332122 + (CAGAGA)n Simple_repeat Simple_repeat 3 90 0 4 854 437 244 12 3 chrX 35318201 35318527 -131331769 + (CAGAGA)n Simple_repeat Simple_repeat 1 329 0 4 854 244 289 0 0 chrX 35318486 35318583 -131331713 + (CA)n Simple_repeat Simple_repeat 2 98 0 4 854 404 166 11 59 chrX 35318594 35318780 -131331516 + (CAGAGA)n Simple_repeat Simple_repeat 4 180 0 4 854 363 251 42 12 chrX 35318789 35318954 -131331342 + (CAGA)n Simple_repeat Simple_repeat 2 171 0 4 854 262 181 22 55 chrX 35318960 35319141 -131331155 + (CAGAGA)n Simple_repeat Simple_repeat 4 178 0 4 854 419 216 21 74 chrX 35319165 35319355 -131330941 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 4 854 474 224 52 14 chrX 35319342 35319626 -131330670 + (CAGA)n Simple_repeat Simple_repeat 1 294 0 4 854 291 180 22 44 chrX 35319641 35319821 -131330475 + (CAGA)n Simple_repeat Simple_repeat 2 177 0 4 854 432 230 33 33 chrX 35319824 35320004 -131330292 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 4 854 406 250 47 23 chrX 35319917 35320089 -131330207 + (CAGA)n Simple_repeat Simple_repeat 2 177 0 4 854 221 215 27 27 chrX 35320126 35320274 -131330022 + (CAGAGA)n Simple_repeat Simple_repeat 1 148 0 4 854 450 188 21 64 chrX 35320298 35320554 -131329742 + (CAGAGA)n Simple_repeat Simple_repeat 1 245 0 4 854 400 153 67 0 chrX 35320565 35320715 -131329581 + (CAGA)n Simple_repeat Simple_repeat 2 161 0 4 854 408 221 23 57 chrX 35320717 35320894 -131329402 + (CAGAGA)n Simple_repeat Simple_repeat 6 176 0 4 854 270 265 10 20 chrX 35320916 35321016 -131329280 + (CAGAGA)n Simple_repeat Simple_repeat 5 103 0 4 854 243 185 36 18 chrX 35321022 35321132 -131329164 + (CAGA)n Simple_repeat Simple_repeat 2 113 0 4 854 298 215 53 13 chrX 35321150 35321451 -131328845 + (CAGA)n Simple_repeat Simple_repeat 1 313 0 4 854 203 239 12 12 chrX 35321499 35321669 -131328627 + (CAGA)n Simple_repeat Simple_repeat 1 170 0 4 854 186 122 32 80 chrX 35321676 35321801 -131328495 + (CAGAGA)n Simple_repeat Simple_repeat 2 120 0 4 854 249 257 32 39 chrX 35321812 35321966 -131328330 + (CAGAGA)n Simple_repeat Simple_repeat 4 156 0 4 854 187 162 37 37 chrX 35321977 35322086 -131328210 + (CAGAGA)n Simple_repeat Simple_repeat 6 114 0 4 854 204 181 0 60 chrX 35322197 35322297 -131327999 + (CAGAGA)n Simple_repeat Simple_repeat 1 94 0 4 854 467 225 46 26 chrX 35322324 35322680 -131327616 + (CAGA)n Simple_repeat Simple_repeat 1 363 0 4 854 373 215 49 11 chrX 35322709 35323086 -131327210 + (CAGA)n Simple_repeat Simple_repeat 1 391 0 4 854 384 253 28 44 chrX 35323114 35323350 -131326946 + (CAGAGA)n Simple_repeat Simple_repeat 1 232 0 4 854 225 180 66 13 chrX 35323422 35323574 -131326722 + (CAGA)n Simple_repeat Simple_repeat 2 161 0 4 854 294 165 55 0 chrX 35323670 35323779 -131326517 + (CAGA)n Simple_repeat Simple_repeat 2 116 0 4 854 249 233 47 0 chrX 35323785 35323871 -131326425 + (CAGAGA)n Simple_repeat Simple_repeat 5 94 0 4 854 339 271 13 25 chrX 35323884 35324043 -131326253 + (CAGAGA)n Simple_repeat Simple_repeat 4 160 0 4 854 236 155 0 58 chrX 35324082 35324185 -131326111 + (CAGAGA)n Simple_repeat Simple_repeat 6 102 0 4 854 236 306 0 0 chrX 35324235 35324333 -131325963 + (CA)n Simple_repeat Simple_repeat 1 98 0 4 854 284 188 29 29 chrX 35324353 35324490 -131325806 + (CAGA)n Simple_repeat Simple_repeat 4 140 0 4 854 231 146 0 0 chrX 35324603 35324644 -131325652 + (GGGAGA)n Simple_repeat Simple_repeat 6 46 0 4 854 366 229 0 0 chrX 35324681 35324962 -131325334 + (CAGAGA)n Simple_repeat Simple_repeat 1 281 0 4 854 240 163 0 0 chrX 35325028 35325071 -131325225 + GA-rich Low_complexity Low_complexity 4 46 0 4 854 266 262 0 0 chrX 35325078 35325162 -131325134 + (CAGAGA)n Simple_repeat Simple_repeat 4 87 0 4 854 378 318 6 6 chrX 35325132 35325376 -131324920 + (CA)n Simple_repeat Simple_repeat 1 244 0 4 854 733 215 0 17 chrX 35325454 35325814 -131324482 + (CAGA)n Simple_repeat Simple_repeat 1 353 0 4 854 797 197 60 77 chrX 35325826 35326114 -131324182 - RLTRETN_Mm LTR ERVK 0 393 108 4 854 1023 179 65 13 chrX 35326114 35326371 -131323925 - MMETn-int LTR ERVK -982 6424 6222 4 854 5263 115 49 21 chrX 35326407 35327450 -131322846 - MMETn-int LTR ERVK -1703 3141 2356 4 854 362 261 0 0 chrX 35327426 35327495 -131322801 - MMETn-int LTR ERVK -3321 4085 4017 4 854 8894 36 1 5 chrX 35327740 35329471 -131320825 - L1Md_F2 LINE L1 -3 6579 4858 4 854 3394 136 35 3 chrX 35329471 35330047 -131320249 - MMETn-int LTR ERVK -3371 4035 3442 4 854 3044 136 29 92 chrX 35330588 35331177 -131319119 - MMETn-int LTR ERVK -4290 554 3 4 854 1028 210 99 122 chrX 35331181 35331583 -131318713 - RLTR9C LTR ERVK 0 393 1 4 854 286 267 0 0 chrX 35331590 35331665 -131318631 + (CA)n Simple_repeat Simple_repeat 2 76 0 4 854 186 220 0 0 chrX 35331677 35331736 -131318560 + GA-rich Low_complexity Low_complexity 2 60 0 4 854 326 324 0 0 chrX 35331736 35331906 -131318390 + (CA)n Simple_repeat Simple_repeat 1 170 0 4 854 388 256 17 22 chrX 35331855 35332035 -131318261 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 4 854 452 274 0 38 chrX 35331982 35332168 -131318128 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 854 430 238 23 28 chrX 35332098 35332275 -131318021 + (CAGA)n Simple_repeat Simple_repeat 4 179 0 4 854 219 123 26 52 chrX 35332275 35332352 -131317944 + (CAGAGA)n Simple_repeat Simple_repeat 2 76 0 4 854 435 202 34 24 chrX 35332376 35332672 -131317624 + (CAGA)n Simple_repeat Simple_repeat 1 299 0 4 854 183 162 0 0 chrX 35332713 35332750 -131317546 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 854 486 153 0 35 chrX 35332825 35332967 -131317329 + (CAGA)n Simple_repeat Simple_repeat 4 140 0 4 854 319 261 40 108 chrX 35333001 35333177 -131317119 + L1M4b LINE L1 1761 1924 -5410 4 854 356 174 17 0 chrX 35333333 35333448 -131316848 + (CAGA)n Simple_repeat Simple_repeat 4 120 0 4 854 255 240 0 40 chrX 35333450 35333550 -131316746 + (CAGAGA)n Simple_repeat Simple_repeat 1 96 0 4 854 321 172 0 0 chrX 35333564 35333657 -131316639 + (CAGA)n Simple_repeat Simple_repeat 4 96 0 4 854 346 253 33 7 chrX 35333660 35333875 -131316421 + (CAGAGA)n Simple_repeat Simple_repeat 1 220 0 4 854 318 149 21 50 chrX 35333958 35334099 -131316197 + (CAGAGA)n Simple_repeat Simple_repeat 6 142 0 5 854 477 211 0 0 chrX 35334124 35334347 -131315949 + (CA)n Simple_repeat Simple_repeat 1 223 0 5 854 369 0 0 0 chrX 35335069 35335110 -131315186 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 854 249 196 0 0 chrX 35337561 35337607 -131312689 - L1_Rod LINE L1 -6805 367 322 5 854 3088 71 8 5 chrX 35338064 35338463 -131311833 - MTB LTR MaLR 0 400 1 5 854 8120 56 2 2 chrX 35340892 35342328 -131307968 - L1Md_F2 LINE L1 0 6582 5148 5 854 19326 98 18 14 chrX 35342329 35345799 -131304497 - L1Md_F2 LINE L1 -2177 3706 238 5 854 12509 82 10 37 chrX 35345799 35348600 -131301696 - L1VL2 LINE L1 -903 2712 1 5 854 1012 102 0 0 chrX 35348606 35348743 -131301553 - L1VL2 LINE L1 -6133 202 66 5 854 741 295 83 65 chrX 35352960 35353297 -131296999 - MTD LTR MaLR -53 366 1 5 854 2131 152 38 55 chrX 35353344 35353762 -131296534 + RLTR19 LTR ERVK 1 411 -88 5 854 1078 177 9 61 chrX 35353883 35354112 -131296184 - URR1A DNA MER1_type 0 226 10 5 854 1590 117 40 8 chrX 35355115 35355364 -131294932 - ORR1A3 LTR MaLR 0 326 70 5 854 2026 131 22 0 chrX 35355368 35355680 -131294616 - ORR1A2 LTR MaLR -8 319 1 5 854 11075 129 38 59 chrX 35355680 35357685 -131292611 - ORR1A2-int LTR MaLR 0 1963 2 5 854 465 94 0 0 chrX 35357691 35357755 -131292541 - ORR1A2 LTR MaLR -8 386 323 5 854 6502 73 28 2 chrX 35357763 35358600 -131291696 - L1_Mus1 LINE L1 -1 6566 5709 5 854 1380 151 75 12 chrX 35358600 35358855 -131291441 - ORR1A2 LTR MaLR -75 271 1 5 854 507 14 27 14 chrX 35360862 35360935 -131289361 + (CA)n Simple_repeat Simple_repeat 2 75 0 5 854 266 278 226 6 chrX 35360935 35361116 -131289180 - Lx7 LINE L1 -16 7680 7460 5 854 966 285 25 37 chrX 35361112 35361436 -131288860 - Lx7 LINE L1 -376 7320 7001 5 854 1122 156 79 15 chrX 35361640 35361842 -131288454 - URR1B DNA MER1_type 0 225 11 5 854 8220 116 38 8 chrX 35362254 35363491 -131286805 - Lx4A LINE L1 -2 7056 5783 5 854 4577 24 3 45 chrX 35363497 35364068 -131286228 - L1Md_F2 LINE L1 0 6582 6036 5 854 3103 95 114 21 chrX 35364085 35364603 -131285693 + L1_Mur2 LINE L1 5178 5743 -134 5 854 970 43 101 0 chrX 35368694 35368832 -131281464 - L1Md_F3 LINE L1 -1 6583 6432 5 854 213 39 0 0 chrX 35369474 35369500 -131280796 + (GA)n Simple_repeat Simple_repeat 2 27 0 5 854 617 108 0 70 chrX 35372344 35372444 -131277852 - B1_Mus2 SINE Alu 0 147 55 5 854 387 0 16 49 chrX 35372601 35372662 -131277634 + (TATAA)n Simple_repeat Simple_repeat 4 62 0 5 854 940 162 12 0 chrX 35373166 35373333 -131276963 - ORR1A2-int LTR MaLR -1623 169 1 5 854 2069 147 22 0 chrX 35373333 35373653 -131276643 - ORR1A2 LTR MaLR 0 327 1 5 854 4436 132 64 0 chrX 35373653 35374374 -131275922 + L1_Mur2 LINE L1 4843 5609 -268 5 854 2909 75 22 7 chrX 35374374 35374789 -131275507 + BGLII LTR ERVK 1 421 0 5 854 3497 28 2 0 chrX 35376791 35377186 -131273110 + MTA_Mm LTR MaLR 1 396 0 5 854 297 0 0 0 chrX 35380137 35380170 -131270126 + (ATG)n Simple_repeat Simple_repeat 1 33 0 5 854 261 75 0 0 chrX 35383877 35383917 -131266379 + (A)n Simple_repeat Simple_repeat 1 40 0 5 854 7183 11 0 0 chrX 35385216 35386015 -131264281 + L1Md_A LINE L1 4788 5586 -297 5 854 9212 3 0 0 chrX 35386015 35387011 -131263285 + L1Md_A LINE L1 5587 6582 0 5 854 4778 45 0 0 chrX 35387385 35387946 -131262350 - L1Md_T LINE L1 0 6582 6022 5 855 231 0 77 0 chrX 35389790 35389829 -131260467 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 5 855 186 176 0 0 chrX 35390119 35390170 -131260126 + T-rich Low_complexity Low_complexity 1 51 0 5 855 2120 85 10 16 chrX 35390190 35390500 -131259796 - L1_Mus3 LINE L1 -6 6632 6325 5 855 2984 33 19 11 chrX 35390604 35390975 -131259321 + L1_Mus1 LINE L1 6193 6566 -1 5 855 282 270 74 142 chrX 35391039 35391229 -131259067 + B3 SINE B2 5 216 0 5 855 419 0 20 0 chrX 35394682 35394733 -131255563 + (TC)n Simple_repeat Simple_repeat 2 53 0 5 855 252 0 0 0 chrX 35394733 35394760 -131255536 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 855 263 28 28 0 chrX 35394764 35394800 -131255496 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 855 586 116 0 0 chrX 35396656 35396742 -131253554 - B1_Mus2 SINE Alu -7 140 55 5 855 2091 204 4 50 chrX 35397053 35397513 -131252783 + Lx5 LINE L1 6481 6919 -131 5 855 5203 107 38 4 chrX 35398325 35399098 -131251198 + Lx LINE L1 5851 6649 -5 5 855 26 30 0 0 chrX 35399112 35399145 -131251151 + AT_rich Low_complexity Low_complexity 1 33 0 5 855 495 33 0 0 chrX 35399622 35399683 -131250613 + (TTG)n Simple_repeat Simple_repeat 2 62 0 5 855 502 299 6 33 chrX 35401927 35402205 -131248091 + G-rich Low_complexity Low_complexity 1 270 0 5 855 1421 79 26 0 chrX 35402331 35402520 -131247776 + B2_Mm2 SINE B2 2 195 0 5 855 865 62 8 8 chrX 35402822 35402952 -131247344 + L1Md_F2 LINE L1 6453 6582 0 5 855 22 0 0 0 chrX 35403210 35403232 -131247064 + AT_rich Low_complexity Low_complexity 1 22 0 5 855 7337 158 34 7 chrX 35404966 35406907 -131243389 - Lx5 LINE L1 -109 6941 4935 5 855 295 106 0 21 chrX 35406950 35406998 -131243298 - RLTR25B LTR ERVK -607 421 375 5 855 342 200 24 36 chrX 35406991 35407074 -131243222 - RLTR25B LTR ERVK -946 82 1 5 855 361 0 0 23 chrX 35407074 35407118 -131243178 - Lx LINE L1 -800 5854 5812 5 855 1792 156 63 41 chrX 35407118 35407485 -131242811 - RLTR25B LTR ERVK -653 375 1 5 855 1836 140 21 62 chrX 35407485 35407821 -131242475 - L1_Mur2 LINE L1 -29 5848 5527 5 855 4375 129 27 12 chrX 35407827 35408562 -131241734 - L1_Mur2 LINE L1 -1813 4064 3319 5 855 215 272 0 52 chrX 35409521 35409618 -131240678 + C-rich Low_complexity Low_complexity 4 95 0 5 855 381 181 46 265 chrX 35409925 35410121 -131240175 + RLTR42-int LTR ERVK 1689 1841 -3681 5 855 342 170 83 19 chrX 35410088 35410196 -131240100 + MYSERV-int LTR ERVK 5339 5453 -1097 5 855 612 187 101 18 chrX 35410510 35410679 -131239617 + RLTR42-int LTR ERVK 1919 2101 -3421 5 855 259 308 48 0 chrX 35410679 35410783 -131239513 + L1M3 LINE L1 5657 5765 -418 5 855 775 229 18 0 chrX 35412108 35412278 -131238018 - B3 SINE B2 -4 212 40 5 855 434 274 133 56 chrX 35413182 35413527 -131236769 - MER31A LTR ERV1 -70 415 63 5 855 423 0 0 0 chrX 35414303 35414350 -131235946 + (TTTTC)n Simple_repeat Simple_repeat 5 51 0 5 855 654 224 75 80 chrX 35414355 35414554 -131235742 - B3 SINE B2 -14 202 5 5 855 243 0 0 0 chrX 35414596 35414623 -131235673 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 5 855 1159 58 0 0 chrX 35414626 35414764 -131235532 - B1_Mus2 SINE Alu -5 142 5 5 855 437 149 373 0 chrX 35414857 35414991 -131235305 - B2_Mm2 SINE B2 -7 188 5 5 855 374 332 123 32 chrX 35415315 35415623 -131234673 - Lx8 LINE L1 -1 7472 7137 5 855 207 0 0 0 chrX 35416084 35416107 -131234189 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 855 865 107 122 0 chrX 35416891 35417022 -131233274 + B1_Mus1 SINE Alu 1 147 -1 5 855 411 240 105 30 chrX 35417278 35417411 -131232885 - RSINE1 SINE B4 -12 153 11 5 855 1342 291 89 19 chrX 35417455 35417925 -131232371 + Lx9 LINE L1 6409 6911 -733 5 855 210 91 0 0 chrX 35417925 35417958 -131232338 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 5 855 453 243 9 27 chrX 35418008 35418118 -131232178 - RSINE1 SINE B4 -5 160 53 5 855 531 0 0 0 chrX 35418752 35418811 -131231485 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 5 855 1416 61 33 0 chrX 35418813 35418993 -131231303 - B2_Mm2 SINE B2 -9 186 1 5 855 185 35 0 65 chrX 35420207 35420238 -131230058 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 855 264 186 64 31 chrX 35421104 35421208 -131229088 - L1M3 LINE L1 -497 5677 5570 5 855 2106 246 19 7 chrX 35421855 35422317 -131227979 - Lx6 LINE L1 -1 7459 6992 5 855 221 273 28 3 chrX 35422378 35422458 -131227838 + MIR SINE MIR 76 161 -115 5 855 3126 225 13 17 chrX 35423027 35423719 -131226577 - Lx5 LINE L1 -78 6972 6284 5 855 1067 164 38 0 chrX 35423845 35424028 -131226268 + B2_Mm2 SINE B2 2 191 -4 5 855 3743 90 0 2 chrX 35425492 35425982 -131224314 - L1Md_F2 LINE L1 -131 6451 5963 5 855 678 102 0 45 chrX 35425982 35426115 -131224181 + L1Md_F2 LINE L1 6453 6579 -3 5 855 288 77 0 0 chrX 35426166 35426205 -131224091 + (A)n Simple_repeat Simple_repeat 1 39 0 5 855 21 0 0 0 chrX 35426213 35426234 -131224062 + AT_rich Low_complexity Low_complexity 1 21 0 5 855 21 57 0 0 chrX 35426313 35426348 -131223948 + AT_rich Low_complexity Low_complexity 1 35 0 5 855 357 43 0 0 chrX 35426707 35426754 -131223542 + (TGG)n Simple_repeat Simple_repeat 3 49 0 5 855 516 222 0 0 chrX 35426759 35426858 -131223438 + B1_Mur4 SINE Alu 20 118 -32 5 855 504 0 0 0 chrX 35426858 35426914 -131223382 + (CAGAGA)n Simple_repeat Simple_repeat 6 61 0 5 855 444 135 0 0 chrX 35426915 35426989 -131223307 + (GGGGA)n Simple_repeat Simple_repeat 3 76 0 5 855 444 163 0 0 chrX 35428704 35428790 -131221506 + (CATA)n Simple_repeat Simple_repeat 4 89 0 5 855 405 281 63 28 chrX 35429000 35429143 -131221153 - RSINE1 SINE B4 -12 153 6 5 855 5462 118 14 0 chrX 35430582 35431553 -131218743 - Lx4B LINE L1 -1043 6015 5022 5 855 3872 160 20 3 chrX 35431551 35432191 -131218105 + Lx4B LINE L1 6013 6663 -395 5 855 410 75 0 0 chrX 35432187 35432240 -131218056 - Lx LINE L1 -935 5719 5667 5 855 2000 186 5 65 chrX 35432541 35432961 -131217335 + Lx4B LINE L1 6649 7043 -15 5 855 234 0 0 0 chrX 35432961 35432987 -131217309 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 5 855 2000 186 5 65 chrX 35432987 35432998 -131217298 + Lx4B LINE L1 7044 7054 -4 5 855 214 254 45 0 chrX 35433205 35433272 -131217024 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 5 855 513 0 0 0 chrX 35433272 35433329 -131216967 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 5 855 2031 245 170 25 chrX 35433884 35434984 -131215312 + L1_Mur3 LINE L1 920 2189 -3691 5 855 1007 155 6 0 chrX 35434981 35435149 -131215147 + L1_Mur3 LINE L1 4989 5157 -723 5 855 260 237 17 0 chrX 35435161 35435220 -131215076 + Lx7 LINE L1 7261 7320 -376 5 855 261 233 0 0 chrX 35435228 35435288 -131215008 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 855 208 247 12 36 chrX 35435293 35435377 -131214919 + T-rich Low_complexity Low_complexity 4 85 0 5 855 41 21 0 0 chrX 35435430 35435478 -131214818 + AT_rich Low_complexity Low_complexity 1 48 0 6 855 647 305 67 60 chrX 35435854 35436629 -131213667 + L1MB3 LINE L1 5369 6154 -17 6 855 294 261 26 43 chrX 35437318 35437434 -131212862 + B1F SINE Alu 20 133 -16 6 855 478 288 68 17 chrX 35438558 35438851 -131211445 + RCHARR1 DNA MER1_type 516 823 -151 6 855 1767 162 0 3 chrX 35438906 35439204 -131211092 - RLTR14 LTR ERV1 -85 297 1 6 855 369 301 23 0 chrX 35439209 35439342 -131210954 + RCHARR1 DNA MER1_type 838 973 -1 6 855 213 65 0 0 chrX 35439848 35439879 -131210417 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 855 1095 85 0 0 chrX 35439881 35440022 -131210274 - B1_Mus1 SINE Alu -6 142 2 6 855 297 235 49 12 chrX 35440130 35440212 -131210084 + MTEa LTR MaLR 14 98 -281 6 855 407 305 54 12 chrX 35441174 35441340 -131208956 + ERVL-int LTR ERVL 936 1159 -4602 6 855 1894 305 81 28 chrX 35441340 35441411 -131208885 - Lx9 LINE L1 -7 7637 7574 6 855 943 68 62 0 chrX 35441411 35441572 -131208724 + (TCCC)n Simple_repeat Simple_repeat 3 173 0 6 855 1894 305 81 28 chrX 35441572 35442384 -131207912 - Lx9 LINE L1 -71 7573 6708 6 855 680 304 63 3 chrX 35442392 35442725 -131207571 - L1_Rod LINE L1 -450 5430 5081 6 855 427 273 63 28 chrX 35443904 35444047 -131206249 + RSINE1 SINE B4 6 153 -12 6 855 333 118 0 0 chrX 35444258 35444309 -131205987 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 855 477 0 0 0 chrX 35444309 35444361 -131205935 + (GA)n Simple_repeat Simple_repeat 1 53 0 6 855 399 167 0 0 chrX 35444704 35444794 -131205502 + A-rich Low_complexity Low_complexity 1 90 0 6 855 298 298 106 0 chrX 35444795 35444889 -131205407 - B4 SINE B4 -67 225 122 6 855 313 292 125 40 chrX 35444946 35445274 -131205022 + L1MB2 LINE L1 5795 6150 -21 6 855 569 307 108 33 chrX 35445384 35445764 -131204532 + ERVL-int LTR ERVL 1261 1638 -4119 6 855 275 229 29 0 chrX 35445961 35446031 -131204265 - MIR SINE MIR -61 147 76 6 855 2136 257 26 12 chrX 35446046 35446554 -131203742 + Lx6 LINE L1 6945 7459 -1 6 855 7699 66 10 2 chrX 35446733 35448133 -131202163 + L1_Mus1 LINE L1 5314 6567 0 6 855 1188 103 0 0 chrX 35448923 35449097 -131201199 + (TCTCC)n Simple_repeat Simple_repeat 5 178 0 6 855 658 162 79 29 chrX 35449128 35449268 -131201028 - B1_Mur3 SINE Alu 0 149 3 6 855 30 0 0 0 chrX 35449795 35449825 -131200471 + AT_rich Low_complexity Low_complexity 1 30 0 6 855 2461 55 26 0 chrX 35449825 35450136 -131200160 - L1_Mus1 LINE L1 -1 6566 6248 6 855 627 54 0 0 chrX 35450136 35450210 -131200086 + L1Md_F2 LINE L1 6174 6247 -335 6 855 4532 125 19 10 chrX 35450282 35450985 -131199311 + Lx2 LINE L1 5932 6640 -357 6 855 1326 146 0 0 chrX 35450988 35451200 -131199096 + Lx LINE L1 6427 6638 -16 6 855 210 71 0 0 chrX 35452406 35452434 -131197862 + (TTG)n Simple_repeat Simple_repeat 2 29 0 6 855 206 225 0 0 chrX 35452621 35452661 -131197635 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 6 855 1059 177 15 10 chrX 35452661 35452866 -131197430 - Lx4B LINE L1 -4 7054 6849 6 855 353 333 0 0 chrX 35453891 35453990 -131196306 - PB1D10 SINE Alu -12 105 7 6 855 553 283 80 10 chrX 35454067 35454267 -131196029 + B3 SINE B2 3 216 0 6 855 2962 174 23 21 chrX 35454864 35455435 -131194861 - RMER15 LTR ERVL -3 572 1 6 855 22 35 0 0 chrX 35457594 35457623 -131192673 + AT_rich Low_complexity Low_complexity 1 29 0 6 855 384 88 0 0 chrX 35457678 35457735 -131192561 + (TC)n Simple_repeat Simple_repeat 1 57 0 6 855 308 294 135 9 chrX 35457745 35458029 -131192267 - Lx7 LINE L1 -282 7414 7106 6 855 715 204 0 0 chrX 35458492 35458624 -131191672 + Lx7 LINE L1 6908 7039 -657 6 855 26 0 0 0 chrX 35458768 35458794 -131191502 + AT_rich Low_complexity Low_complexity 1 26 0 6 855 285 244 99 88 chrX 35460359 35460530 -131189766 + L1MB2 LINE L1 5998 6170 -1 6 855 216 312 47 0 chrX 35460552 35460616 -131189680 + ID4_ SINE ID 7 73 -10 6 855 599 129 14 54 chrX 35461501 35461648 -131188648 + Lx4B LINE L1 6900 7040 -18 6 855 180 111 0 0 chrX 35461650 35461677 -131188619 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 6 855 4850 58 0 13 chrX 35461879 35462491 -131187805 - L1Md_F2 LINE L1 0 6582 5979 6 855 648 26 0 0 chrX 35462629 35462707 -131187589 + (TG)n Simple_repeat Simple_repeat 1 78 0 6 855 444 256 137 0 chrX 35462728 35462845 -131187451 - B3A SINE B2 -65 133 1 6 855 589 246 37 15 chrX 35463086 35463222 -131187074 - RSINE1 SINE B4 -13 152 14 6 855 2014 209 138 14 chrX 35463722 35464223 -131186073 - RMER15 LTR ERVL -12 563 1 6 855 1202 155 110 0 chrX 35464792 35464992 -131185304 - URR1A DNA MER1_type 0 226 5 6 855 410 82 0 16 chrX 35465456 35465518 -131184778 + B2_Mm2 SINE B2 1 61 -134 6 855 864 268 5 14 chrX 35466334 35466546 -131183750 + B3 SINE B2 1 210 -6 6 855 302 318 103 19 chrX 35466574 35466837 -131183459 - MER31A LTR ERV1 -138 347 63 6 855 356 287 127 48 chrX 35467468 35467850 -131182446 + L1MB1 LINE L1 5597 6009 -180 6 855 441 295 75 34 chrX 35468249 35468536 -131181760 - RMER20B LTR ERVK -209 418 127 6 855 24 53 0 0 chrX 35468676 35468714 -131181582 + AT_rich Low_complexity Low_complexity 1 38 0 6 855 377 211 93 8 chrX 35468795 35468924 -131181372 + Lx9 LINE L1 7504 7643 -1 6 855 1644 159 144 15 chrX 35469304 35469637 -131180659 - ORR1C1 LTR MaLR 0 378 3 6 855 1163 139 5 31 chrX 35469639 35469862 -131180434 - ORR1C1-int LTR MaLR 0 1509 1293 6 855 275 233 65 32 chrX 35469968 35470061 -131180235 + MER102a DNA MER1_type 213 308 -22 6 855 201 74 0 0 chrX 35470123 35470150 -131180146 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 855 899 205 104 16 chrX 35470150 35470333 -131179963 - B3 SINE B2 -13 203 1 6 855 405 0 0 0 chrX 35472073 35472118 -131178178 + (TC)n Simple_repeat Simple_repeat 1 45 0 6 855 1131 82 0 36 chrX 35472142 35472307 -131177989 - L1_Mus2 LINE L1 0 6566 6408 6 855 652 267 5 70 chrX 35472545 35472746 -131177550 - B3A SINE B2 0 198 11 6 855 230 149 43 0 chrX 35472766 35472813 -131177483 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 6 855 847 193 0 0 chrX 35473238 35473388 -131176908 - B1_Mur4 SINE Alu 0 150 1 6 855 235 216 0 0 chrX 35474799 35474850 -131175446 + (CTG)n Simple_repeat Simple_repeat 2 52 0 6 855 297 0 0 0 chrX 35475594 35475627 -131174669 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 855 405 0 0 0 chrX 35475627 35475671 -131174625 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 855 198 0 0 0 chrX 35475715 35475737 -131174559 + (TA)n Simple_repeat Simple_repeat 1 22 0 6 855 358 247 12 12 chrX 35475746 35475790 -131174506 - Lx9 LINE L1 -333 7311 7267 6 855 432 130 0 0 chrX 35475790 35475859 -131174437 + (CTG)n Simple_repeat Simple_repeat 1 69 0 6 855 358 247 12 12 chrX 35475859 35475900 -131174396 - Lx9 LINE L1 -378 7266 7226 6 855 328 360 95 8 chrX 35476531 35476783 -131173513 - B4A SINE B4 -18 274 1 6 855 452 271 0 18 chrX 35477196 35477305 -131172991 - ID_B1 SINE B4 -18 206 100 6 855 351 309 57 0 chrX 35477305 35477319 -131172977 - B1F1 SINE Alu -18 131 2 6 855 198 0 0 0 chrX 35477512 35477534 -131172762 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 6 855 297 0 0 0 chrX 35478763 35478796 -131171500 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 6 855 7633 73 0 2 chrX 35478818 35480102 -131170194 - L1_Mus2 LINE L1 0 6566 5286 6 855 7532 88 10 48 chrX 35480222 35482173 -131168123 - L1_Mus1 LINE L1 -1 6635 4722 6 855 1198 136 11 0 chrX 35482438 35482614 -131167682 + B2_Mm1t SINE B2 2 179 -14 6 855 371 107 308 43 chrX 35482702 35482819 -131167477 + B2_Mm2 SINE B2 48 195 0 6 855 574 173 69 30 chrX 35483474 35483605 -131166691 - Lx7 LINE L1 0 7696 7561 6 855 1032 58 0 0 chrX 35483611 35483748 -131166548 + B1_Mus1 SINE Alu 12 148 0 6 855 352 118 0 29 chrX 35483748 35483818 -131166478 + (GGAA)n Simple_repeat Simple_repeat 4 71 0 6 855 238 171 23 68 chrX 35483818 35483906 -131166390 - Lx7 LINE L1 -122 7574 7491 6 855 1018 265 118 86 chrX 35484546 35485463 -131164833 - RLTR19-int LTR ERVK -1762 4375 3430 6 855 431 274 68 37 chrX 35485647 35485810 -131164486 - MYSERV6-int LTR ERVK -251 8708 8541 6 855 1175 287 94 14 chrX 35485882 35486391 -131163905 - RLTR19-int LTR ERVK -3243 2894 2345 6 855 274 209 32 32 chrX 35486854 35486948 -131163348 - RLTR19-int LTR ERVK -4969 1168 1075 6 855 23 54 0 0 chrX 35486976 35487013 -131163283 + AT_rich Low_complexity Low_complexity 1 37 0 6 855 390 42 0 0 chrX 35487133 35487181 -131163115 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 855 246 95 0 0 chrX 35487277 35487319 -131162977 + (T)n Simple_repeat Simple_repeat 1 42 0 6 855 22 0 0 0 chrX 35487327 35487349 -131162947 + AT_rich Low_complexity Low_complexity 1 22 0 6 855 1116 61 0 0 chrX 35487349 35487497 -131162799 - L1Md_A LINE L1 -3 6579 6432 6 855 567 138 156 0 chrX 35487498 35487607 -131162689 + B1_Mus2 SINE Alu 15 140 -7 6 855 3343 122 90 4 chrX 35487607 35488165 -131162131 + RLTR19-int LTR ERVK 708 1313 -4824 6 855 6418 144 54 60 chrX 35488202 35489937 -131160359 - L1_Mus4 LINE L1 0 6636 4950 6 855 6616 116 98 79 chrX 35489939 35489974 -131160322 + RLTR19-int LTR ERVK 2274 2307 -3830 6 855 1284 85 31 21 chrX 35489974 35490167 -131160129 - B2_Mm2 SINE B2 0 195 1 6 855 6616 116 98 79 chrX 35490167 35490497 -131159799 + RLTR19-int LTR ERVK 2308 2609 -3528 6 855 2474 142 10 5 chrX 35490497 35490894 -131159402 - Lx4A LINE L1 -12 7046 6648 6 855 6616 113 106 53 chrX 35490894 35492541 -131157755 + RLTR19-int LTR ERVK 2610 4381 -1756 6 855 2508 196 12 16 chrX 35492672 35493180 -131157116 + RLTR19C LTR ERVK 1 506 0 6 855 4863 222 33 24 chrX 35493300 35495209 -131155087 - RMER1A Other Other -173 857 1 6 855 312 297 17 28 chrX 35495304 35495555 -131154741 + (TCTCTG)n Simple_repeat Simple_repeat 1 248 0 6 855 381 93 0 0 chrX 35495560 35495614 -131154682 + (TCC)n Simple_repeat Simple_repeat 1 54 0 6 855 504 59 0 0 chrX 35495689 35495757 -131154539 + (TAAA)n Simple_repeat Simple_repeat 2 69 0 6 855 411 98 0 16 chrX 35495796 35495858 -131154438 - L1_Mur3 LINE L1 -3528 2352 2292 7 855 4161 159 39 45 chrX 35495848 35497006 -131153290 - L1_Mur3 LINE L1 -4128 1752 515 7 855 326 306 0 0 chrX 35498035 35498120 -131152176 + RSINE1 SINE B4 2 86 -79 7 855 616 236 124 41 chrX 35498115 35498309 -131151987 + MTD LTR MaLR 158 367 -52 7 855 946 192 11 6 chrX 35498316 35498494 -131151802 + L1_Rod LINE L1 5260 5438 -409 7 855 695 256 0 0 chrX 35498498 35498635 -131151661 - ORR1D1-int LTR MaLR -1233 137 1 7 855 1887 184 5 27 chrX 35498635 35499010 -131151286 - ORR1D1 LTR MaLR 0 374 8 7 855 288 0 0 0 chrX 35499011 35499043 -131151253 + (TA)n Simple_repeat Simple_repeat 2 33 0 7 855 392 280 102 23 chrX 35499050 35499266 -131151030 - L1M4 LINE L1 -3479 2667 2435 7 855 1156 133 0 0 chrX 35499327 35499507 -131150789 + URR1A DNA MER1_type 47 226 0 7 855 387 200 12 24 chrX 35500091 35500173 -131150123 + MER76-int LTR ERVL 1555 1635 -4554 1 855 968 155 0 0 chrX 35500426 35500574 -131149722 + B1_Mur4 SINE Alu 2 149 -1 2 855 572 283 62 54 chrX 35500577 35500801 -131149495 + MER76-int LTR ERVL 1955 2180 -4009 1 855 889 200 110 5 chrX 35500852 35501043 -131149253 + B3 SINE B2 1 211 -5 3 855 1032 258 81 24 chrX 35501074 35501372 -131148924 + ORR1D2 LTR MaLR 56 370 0 4 855 252 278 176 0 chrX 35501407 35501515 -131148781 + L1M2 LINE L1 2476 2602 -4247 5 855 579 261 161 5 chrX 35501516 35501709 -131148587 + MTC LTR MaLR 12 234 -187 6 855 1133 181 49 80 chrX 35503373 35503653 -131146643 + Lx9 LINE L1 7196 7519 -125 7 855 496 53 13 13 chrX 35503653 35503730 -131146566 + (TA)n Simple_repeat Simple_repeat 1 77 0 8 855 549 139 63 90 chrX 35503730 35503848 -131146448 + Lx9 LINE L1 7520 7643 -1 7 855 23 0 0 0 chrX 35503912 35503935 -131146361 + AT_rich Low_complexity Low_complexity 1 23 0 9 855 994 185 68 29 chrX 35504057 35504263 -131146033 - B3 SINE B2 0 216 3 1 855 739 225 14 0 chrX 35504542 35504684 -131145612 + B1_Mur2 SINE Alu 1 144 -5 1 855 1098 268 36 57 chrX 35505171 35505507 -131144789 - Lx5 LINE L1 -242 6808 6480 1 855 1080 276 64 8 chrX 35505499 35505883 -131144413 - Lx5 LINE L1 -676 6374 5945 1 855 504 254 86 82 chrX 35505888 35506085 -131144211 + Lx6 LINE L1 7201 7392 -68 1 855 2022 231 25 82 chrX 35506085 35506526 -131143770 + RMER19C LTR ERVK 3 424 -187 1 855 465 92 0 0 chrX 35506526 35506602 -131143694 + (ATG)n Simple_repeat Simple_repeat 2 77 0 1 855 2022 231 25 82 chrX 35506602 35506806 -131143490 + RMER19C LTR ERVK 425 611 0 1 855 504 254 86 82 chrX 35506806 35506865 -131143431 + Lx6 LINE L1 7393 7458 -2 1 855 359 200 24 24 chrX 35507153 35507235 -131143061 + MT2B LTR ERVL 177 258 -343 1 855 831 103 0 0 chrX 35507162 35507279 -131143017 + B1_Mus1 SINE Alu 32 148 0 1 855 241 192 266 13 chrX 35507561 35507640 -131142656 + PB1D10 SINE Alu 19 117 0 1 855 198 191 0 0 chrX 35507721 35507763 -131142533 + GA-rich Low_complexity Low_complexity 1 42 0 1 855 216 86 0 0 chrX 35507778 35507813 -131142483 + (TATATG)n Simple_repeat Simple_repeat 5 39 0 2 855 690 89 57 0 chrX 35507979 35508102 -131142194 - L1_Mus3 LINE L1 -6 6632 6503 2 855 1741 89 0 0 chrX 35508102 35508326 -131141970 + L1_Mus3 LINE L1 6282 6505 -131 2 855 7635 157 39 9 chrX 35508625 35510876 -131139420 + Lx5 LINE L1 4733 7039 -11 2 855 2150 103 18 59 chrX 35511863 35512203 -131138093 - ORR1A3 LTR MaLR 0 326 1 2 855 1809 105 4 0 chrX 35512577 35512843 -131137453 - ORR1A2 LTR MaLR 0 327 61 2 855 270 344 73 8 chrX 35512842 35512965 -131137331 + B4A SINE B4 158 288 -4 2 855 221 225 0 0 chrX 35512983 35513023 -131137273 + (CACG)n Simple_repeat Simple_repeat 4 43 0 2 855 427 237 106 8 chrX 35513104 35513236 -131137060 + L1_Mur3 LINE L1 4151 4295 -1585 2 855 3098 102 15 11 chrX 35513236 35513756 -131136540 - Lx2 LINE L1 -1064 5933 5399 2 855 658 143 10 46 chrX 35513756 35514001 -131136295 - RMER17C LTR ERVK 0 410 182 2 855 580 185 85 43 chrX 35514140 35514281 -131136015 - RMER17C-int LTR ERVK -3085 153 7 2 855 1507 194 35 25 chrX 35514289 35514738 -131135558 - RMER17C LTR ERVK -519 439 16 2 855 1119 138 11 0 chrX 35514738 35514919 -131135377 - Lx2 LINE L1 -484 5399 5217 2 855 6676 111 30 11 chrX 35514921 35515949 -131134347 + Lx2 LINE L1 5948 6995 -2 3 855 375 229 31 20 chrX 35515950 35516028 -131134268 + L1_Mur3 LINE L1 4286 4363 -1517 2 855 501 48 155 0 chrX 35516028 35516112 -131134184 + L1_Mus2 LINE L1 6469 6565 -1 3 855 375 229 31 20 chrX 35516112 35516131 -131134165 + L1_Mur3 LINE L1 4364 4384 -1496 2 855 260 316 79 68 chrX 35516563 35516753 -131133543 + RLTR41 LTR ERV1 202 393 -53 3 855 24 32 0 0 chrX 35516803 35516834 -131133462 + AT_rich Low_complexity Low_complexity 1 31 0 3 855 217 179 44 15 chrX 35516944 35517012 -131133284 + (TA)n Simple_repeat Simple_repeat 1 70 0 3 855 2332 283 80 67 chrX 35517084 35517228 -131133068 + L1_Mur3 LINE L1 4373 4526 -1354 2 855 2256 142 85 32 chrX 35517228 35517628 -131132668 - MTC LTR MaLR 0 421 1 3 855 2332 283 80 67 chrX 35517628 35518963 -131131333 + L1_Mur3 LINE L1 4527 5871 -9 2 855 360 0 0 0 chrX 35519004 35519044 -131131252 + (TATG)n Simple_repeat Simple_repeat 4 43 0 3 855 1778 108 153 0 chrX 35519147 35519500 -131130796 - RLTR44E LTR ERVK -20 432 26 3 855 548 260 47 0 chrX 35519680 35519807 -131130489 - RSINE1 SINE B4 -32 133 1 3 855 24 0 0 0 chrX 35520012 35520036 -131130260 + AT_rich Low_complexity Low_complexity 1 24 0 3 855 832 289 64 67 chrX 35520115 35520504 -131129792 - MLT1B LTR MaLR 0 390 3 4 856 528 212 0 0 chrX 35520555 35520654 -131129642 - B3A SINE B2 -99 99 1 4 856 219 86 50 33 chrX 35520712 35520772 -131129524 + T-rich Low_complexity Low_complexity 6 66 0 4 856 883 25 65 8 chrX 35520772 35520895 -131129401 - B1_Mus1 SINE Alu 0 148 19 4 856 334 289 52 26 chrX 35520942 35521095 -131129201 + L1M3e LINE L1 9 165 -6865 4 856 393 294 53 25 chrX 35521542 35521691 -131128605 + ID_B1 SINE B4 84 237 -55 4 856 233 204 23 0 chrX 35521708 35521752 -131128544 + RLTR23 LTR ERV1 28 72 -358 4 856 789 200 45 45 chrX 35521753 35521952 -131128344 + RLTR23 LTR ERV1 232 430 0 4 856 242 53 52 35 chrX 35522005 35522038 -131128258 + (TTTG)n Simple_repeat Simple_repeat 4 37 0 4 856 195 42 0 0 chrX 35522038 35522062 -131128234 + (TGG)n Simple_repeat Simple_repeat 1 24 0 4 856 242 53 52 35 chrX 35522062 35522086 -131128210 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 4 856 308 283 20 20 chrX 35523149 35523250 -131127046 + RLTR4_MM-int LTR ERV1 1164 1264 -6188 5 856 210 71 0 0 chrX 35523282 35523310 -131126986 + (GA)n Simple_repeat Simple_repeat 1 28 0 5 856 380 297 89 19 chrX 35523379 35523537 -131126759 + RLTR4_MM-int LTR ERV1 1548 1716 -6062 5 856 388 271 47 34 chrX 35523927 35524076 -131126220 + RLTR4_MM-int LTR ERV1 1812 1962 -2728 5 856 1459 330 84 55 chrX 35524114 35526043 -131124253 + RLTR4_MM-int LTR ERV1 2055 5275 -2326 5 856 311 316 13 19 chrX 35526202 35526259 -131124037 + RLTR14-int LTR ERV1 3721 3858 -1459 5 856 386 295 0 0 chrX 35526259 35526354 -131123942 + RLTR19-int LTR ERVK 4378 4472 -1665 5 856 620 343 40 44 chrX 35527660 35528178 -131122118 + RLTR6-int LTR ERV1 7206 7721 -57 5 856 784 123 72 93 chrX 35528225 35528522 -131121774 + RLTR19-int LTR ERVK 1913 2300 -3837 5 856 522 0 0 0 chrX 35528522 35528580 -131121716 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 856 360 0 0 0 chrX 35528580 35528619 -131121677 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 856 15245 82 54 24 chrX 35528630 35530199 -131120097 - Lx3B LINE L1 -7 6969 5275 5 856 222 62 0 0 chrX 35530199 35530231 -131120065 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 856 15245 99 38 29 chrX 35530231 35532007 -131118289 - Lx3B LINE L1 -612 5274 3491 5 856 685 154 39 0 chrX 35532007 35532137 -131118159 + L1_Mur1 LINE L1 2065 2199 -3687 6 856 4864 124 32 2 chrX 35532130 35532170 -131118126 - Lx3B LINE L1 -3843 2043 2004 5 856 284 64 0 21 chrX 35532170 35532218 -131118078 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 6 856 4864 116 26 2 chrX 35532218 35533059 -131117237 - Lx3B LINE L1 -3883 2003 1138 5 856 1903 85 113 37 chrX 35533209 35533564 -131116732 - RLTR6_Mm LTR ERV1 -70 584 203 6 856 206 269 0 0 chrX 35534826 35534878 -131115418 + C-rich Low_complexity Low_complexity 1 52 0 6 856 225 0 0 0 chrX 35535217 35535242 -131115054 + (TGGGGG)n Simple_repeat Simple_repeat 5 29 0 6 856 210 143 0 0 chrX 35535525 35535560 -131114736 + (T)n Simple_repeat Simple_repeat 1 35 0 6 856 22 56 0 0 chrX 35536132 35536168 -131114128 + AT_rich Low_complexity Low_complexity 1 36 0 6 856 213 200 0 0 chrX 35536334 35536369 -131113927 + polypurine Low_complexity Low_complexity 2 36 0 6 856 2724 176 39 45 chrX 35536632 35537297 -131112999 - L1_Mur1 LINE L1 -5835 1147 519 6 856 1298 173 30 0 chrX 35537326 35537563 -131112733 + RLTR19-int LTR ERVK 2294 2537 -3600 6 856 3540 138 110 13 chrX 35537554 35538173 -131112123 + RLTR19-int LTR ERVK 3701 4379 -1758 6 856 363 182 15 0 chrX 35538328 35538394 -131111902 + RLTR23 LTR ERV1 6 72 -358 7 856 746 223 30 49 chrX 35538395 35538598 -131111698 + RLTR23 LTR ERV1 232 430 0 7 856 294 29 0 0 chrX 35539940 35539975 -131110321 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 7 856 1075 101 6 0 chrX 35539975 35540134 -131110162 - B2_Mm1a SINE B2 -33 160 1 7 856 30 45 0 0 chrX 35540138 35540182 -131110114 + AT_rich Low_complexity Low_complexity 1 44 0 7 856 326 272 37 0 chrX 35540263 35540344 -131109952 - PB1D10 SINE Alu -32 85 2 7 856 7079 48 23 1 chrX 35540344 35541209 -131109087 + L1Md_F3 LINE L1 4703 5586 -297 7 856 8395 36 8 0 chrX 35541209 35542197 -131108099 + L1Md_F3 LINE L1 5587 6582 -2 7 856 456 99 0 0 chrX 35544254 35544325 -131105971 + (TG)n Simple_repeat Simple_repeat 2 72 0 7 856 189 178 0 0 chrX 35548292 35548337 -131101959 + G-rich Low_complexity Low_complexity 1 45 0 7 856 258 251 5 13 chrX 35553560 35553650 -131096646 + Lx8 LINE L1 5826 5916 -1544 7 856 348 24 0 0 chrX 35553818 35553859 -131096437 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 7 856 644 184 73 7 chrX 35554490 35554627 -131095669 + B1_Mur1 SINE Alu 3 148 -1 8 856 248 152 0 0 chrX 35554637 35554683 -131095613 + MTEb LTR MaLR 307 352 -27 8 856 204 40 0 0 chrX 35554683 35554708 -131095588 + (CAA)n Simple_repeat Simple_repeat 3 27 0 8 856 254 115 19 0 chrX 35556553 35556605 -131093691 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 8 856 819 93 8 37 chrX 35556605 35556739 -131093557 - RMER16 LTR ERVK -85 448 319 8 856 252 122 0 0 chrX 35556830 35556871 -131093425 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 856 378 109 21 42 chrX 35557118 35557191 -131093105 + CT-rich Low_complexity Low_complexity 25 96 0 8 856 832 6 69 46 chrX 35557191 35557366 -131092930 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 8 856 378 109 21 42 chrX 35557366 35557388 -131092908 + polypyrimidine Low_complexity Low_complexity 3 24 0 8 856 21 0 0 0 chrX 35557623 35557644 -131092652 + AT_rich Low_complexity Low_complexity 1 21 0 8 856 224 30 30 0 chrX 35557883 35557916 -131092380 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 9 856 540 174 10 0 chrX 35558189 35558287 -131092009 + PB1D10 SINE Alu 18 116 -1 9 856 224 324 42 0 chrX 35558971 35559042 -131091254 + PB1D7 SINE Alu 10 83 -37 9 856 424 146 90 135 chrX 35559050 35559161 -131091135 + RSINE1 SINE B4 59 164 -1 9 856 218 233 0 0 chrX 35559168 35559211 -131091085 + A-rich Low_complexity Low_complexity 1 43 0 9 856 875 106 98 0 chrX 35559508 35559640 -131090656 - B1_Mus1 SINE Alu -2 146 2 9 856 1463 75 0 5 chrX 35559948 35560135 -131090161 + B2_Mm2 SINE B2 2 187 -8 9 856 1097 183 45 5 chrX 35561498 35561696 -131088600 - B3 SINE B2 -10 206 1 9 856 380 293 12 0 chrX 35561719 35561801 -131088495 + ID4 SINE ID 1 83 0 9 856 779 218 86 20 chrX 35562048 35562245 -131088051 - B3 SINE B2 -6 210 1 9 856 446 286 29 0 chrX 35562417 35562522 -131087774 - B3 SINE B2 -108 108 1 1 856 927 239 106 40 chrX 35562875 35563224 -131087072 + RMER13A LTR ERVK 95 466 -394 1 856 1167 61 0 13 chrX 35563246 35563395 -131086901 - B1_Mus1 SINE Alu -1 147 1 1 856 185 288 148 35 chrX 35565353 35565489 -131084807 + MIR3 SINE MIR 32 172 -36 1 856 1127 69 0 27 chrX 35565728 35565877 -131084419 + B1_Mus1 SINE Alu 1 145 -3 1 856 582 15 0 0 chrX 35565882 35565949 -131084347 + (TAGA)n Simple_repeat Simple_repeat 3 69 0 1 856 401 232 22 10 chrX 35565951 35566062 -131084234 + L1M4 LINE L1 5327 5439 -861 1 856 618 205 23 30 chrX 35566244 35566375 -131083921 + B3A SINE B2 1 130 -68 1 856 344 22 0 22 chrX 35566400 35566446 -131083850 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 1 856 223 265 0 0 chrX 35566524 35566573 -131083723 + GA-rich Low_complexity Low_complexity 1 49 0 1 856 1035 94 37 48 chrX 35567214 35567403 -131082893 + B2_Mm2 SINE B2 9 195 0 1 856 192 184 26 0 chrX 35567593 35567631 -131082665 - MER5B DNA MER1_type -136 42 4 1 856 503 254 121 6 chrX 35568852 35569018 -131081278 - MER3 DNA MER1_type -5 204 20 1 856 232 298 110 34 chrX 35569036 35569063 -131081233 - MIRc SINE MIR -74 194 167 1 856 1441 123 27 0 chrX 35569063 35569282 -131081014 + URR1B DNA MER1_type 1 225 0 1 856 275 255 121 10 chrX 35569282 35569381 -131080915 - MIR SINE MIR -98 164 55 1 856 186 43 0 0 chrX 35569434 35569457 -131080839 + (CCA)n Simple_repeat Simple_repeat 2 24 0 1 856 870 260 53 16 chrX 35569711 35569957 -131080339 + MER2 DNA MER2_type 87 341 -4 1 856 243 0 0 0 chrX 35570196 35570223 -131080073 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 856 423 98 0 0 chrX 35570233 35570294 -131080002 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 856 218 352 15 59 chrX 35570311 35570447 -131079849 - B3A SINE B2 -65 133 4 1 856 356 285 68 33 chrX 35570921 35571093 -131079203 + B4 SINE B4 2 170 -122 1 856 198 128 0 0 chrX 35571142 35571181 -131079115 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 856 315 0 0 0 chrX 35571181 35571216 -131079080 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 856 214 103 0 0 chrX 35571406 35571435 -131078861 + ID4 SINE ID 16 44 -39 1 856 334 293 0 0 chrX 35571837 35571912 -131078384 + RSINE1 SINE B4 1 75 -90 1 856 307 202 11 11 chrX 35572606 35572701 -131077595 + CT-rich Low_complexity Low_complexity 2 96 0 1 856 180 209 0 23 chrX 35572764 35572808 -131077488 + L2c LINE L2 3337 3379 -8 1 856 6326 176 47 34 chrX 35573757 35574830 -131075466 + Lx5 LINE L1 5744 6835 -215 1 856 1685 141 150 11 chrX 35574830 35575190 -131075106 + RMER17C LTR ERVK 1 410 0 1 856 6326 176 47 34 chrX 35575190 35575343 -131074953 + Lx5 LINE L1 6836 6986 -64 1 856 755 21 11 0 chrX 35575599 35575692 -131074604 + (TG)n Simple_repeat Simple_repeat 2 95 0 1 856 264 336 23 15 chrX 35575789 35575919 -131074377 + GA-rich Low_complexity Low_complexity 4 134 0 1 856 747 331 95 11 chrX 35576883 35577250 -131073046 + L2a LINE L2 3028 3425 -1 1 856 1089 89 7 0 chrX 35577386 35577532 -131072764 + B1_Mus1 SINE Alu 2 148 0 1 856 188 300 0 16 chrX 35577552 35577613 -131072683 + MIRb SINE MIR 183 242 -26 1 856 705 179 272 6 chrX 35579808 35579977 -131070319 + B3 SINE B2 3 216 0 1 856 477 0 0 0 chrX 35580219 35580272 -131070024 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 856 405 0 0 0 chrX 35580272 35580316 -131069980 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 856 1309 234 24 109 chrX 35581978 35582391 -131067905 + MTE2b LTR MaLR 1 378 -1 1 856 1870 260 103 12 chrX 35582483 35583125 -131067171 + L1MB7 LINE L1 5408 6107 -77 1 856 402 271 19 0 chrX 35583259 35583366 -131066930 + MIRc SINE MIR 138 246 -22 1 856 564 263 45 87 chrX 35584103 35584182 -131066114 - ORSL DNA Tip100 0 275 208 1 856 1409 77 11 0 chrX 35584182 35584365 -131065931 - B2_Mm1t SINE B2 -8 185 1 1 856 564 263 45 87 chrX 35584365 35584572 -131065724 - ORSL DNA Tip100 -68 207 1 1 856 1672 306 82 50 chrX 35584624 35585575 -131064721 + Lx8 LINE L1 6491 7471 -2 1 856 268 269 36 27 chrX 35586707 35586818 -131063478 - MIR3 SINE MIR -34 174 63 1 856 418 313 66 37 chrX 35587065 35587201 -131063095 - ID_B1 SINE B4 -3 221 82 1 856 231 70 0 81 chrX 35588260 35588322 -131061974 + T-rich Low_complexity Low_complexity 4 60 0 1 856 793 80 197 16 chrX 35588322 35588449 -131061847 - B1_Mur4 SINE Alu 0 150 1 1 856 422 312 7 34 chrX 35588473 35588619 -131061677 - ID_B1 SINE B4 -2 222 81 1 856 339 25 0 0 chrX 35589574 35589614 -131060682 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 856 898 208 58 16 chrX 35590639 35590830 -131059466 - B3 SINE B2 -7 209 11 1 856 261 83 0 0 chrX 35590832 35590868 -131059428 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1 856 649 288 7 0 chrX 35590880 35591026 -131059270 - RSINE1 SINE B4 -16 149 3 1 856 480 200 22 0 chrX 35591078 35591168 -131059128 - B3 SINE B2 -42 174 83 1 856 186 43 0 0 chrX 35591172 35591195 -131059101 + (TAGA)n Simple_repeat Simple_repeat 2 24 0 1 856 1274 271 6 12 chrX 35591218 35591561 -131058735 + MTEb LTR MaLR 37 377 -2 1 856 312 238 23 23 chrX 35591904 35591990 -131058306 + MIRc SINE MIR 64 149 -119 1 856 505 311 0 22 chrX 35591996 35592131 -131058165 + RSINE1 SINE B4 12 143 -22 1 856 449 125 0 0 chrX 35592798 35592870 -131057426 - BGLII LTR ERVK 0 421 350 1 856 552 217 7 128 chrX 35592872 35593020 -131057276 - B1_Mur3 SINE Alu -17 132 3 1 856 630 239 193 0 chrX 35593158 35593334 -131056962 + B3 SINE B2 1 210 -6 1 856 326 316 17 0 chrX 35593533 35593650 -131056646 - PB1D7 SINE Alu -1 119 1 1 856 396 267 128 24 chrX 35593864 35594113 -131056183 + MER46C DNA MER2_type 4 278 -60 1 856 654 13 0 0 chrX 35594514 35594589 -131055707 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 1 856 23 0 0 0 chrX 35594636 35594659 -131055637 + AT_rich Low_complexity Low_complexity 1 23 0 1 856 383 0 0 21 chrX 35596372 35596420 -131053876 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 856 525 121 0 0 chrX 35596527 35596610 -131053686 + (CA)n Simple_repeat Simple_repeat 1 83 0 1 856 243 146 0 0 chrX 35596617 35596658 -131053638 + (GGGA)n Simple_repeat Simple_repeat 1 41 0 1 856 330 0 60 0 chrX 35597666 35597716 -131052580 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 1 856 508 326 177 62 chrX 35597741 35598322 -131051974 + Charlie7 DNA MER1_type 12 658 -1954 1 856 183 156 0 0 chrX 35598413 35598445 -131051851 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 856 477 0 0 0 chrX 35599945 35599998 -131050298 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 856 234 81 0 0 chrX 35601203 35601240 -131049056 + (A)n Simple_repeat Simple_repeat 1 37 0 1 856 423 0 0 0 chrX 35603127 35603174 -131047122 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 856 222 37 0 0 chrX 35604351 35604378 -131045918 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 856 720 0 0 0 chrX 35604591 35604671 -131045625 + (TC)n Simple_repeat Simple_repeat 2 81 0 1 856 423 52 0 0 chrX 35604908 35604966 -131045330 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 856 411 56 0 0 chrX 35605130 35605184 -131045112 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 856 256 241 17 0 chrX 35605635 35605693 -131044603 + C-rich Low_complexity Low_complexity 2 60 0 1 856 402 69 0 0 chrX 35605993 35606051 -131044245 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 856 386 250 33 0 chrX 35606197 35606289 -131044007 + CR1_Mam LINE CR1 2016 2110 -94 1 856 236 364 61 0 chrX 35606427 35606559 -131043737 - MIRc SINE MIR -79 189 50 1 856 757 282 89 19 chrX 35606710 35606981 -131043315 + B4A SINE B4 3 292 0 1 856 432 0 0 0 chrX 35608776 35608824 -131041472 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 856 205 280 27 0 chrX 35608850 35608925 -131041371 + (CATATA)n Simple_repeat Simple_repeat 1 77 0 1 856 277 250 12 12 chrX 35609334 35609415 -131040881 - L1M5 LINE L1 -315 5809 5729 1 856 356 59 20 0 chrX 35609573 35609624 -131040672 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 856 345 75 0 0 chrX 35609624 35609677 -131040619 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 856 1121 221 91 9 chrX 35609763 35610082 -131040214 - Lx9 LINE L1 -6 7638 7294 1 856 710 208 61 25 chrX 35610395 35610558 -131039738 - B3 SINE B2 0 216 48 1 856 588 14 0 0 chrX 35611878 35611947 -131038349 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 856 780 279 122 10 chrX 35612038 35612422 -131037874 + L1ME4a LINE L1 5596 6022 -102 1 856 25 0 0 0 chrX 35612452 35612477 -131037819 + AT_rich Low_complexity Low_complexity 1 25 0 1 856 1202 89 0 16 chrX 35612621 35612804 -131037492 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 856 264 304 84 38 chrX 35613267 35613530 -131036766 - L1ME4a LINE L1 -158 5966 5692 1 856 498 266 0 0 chrX 35614554 35614731 -131035565 + CT-rich Low_complexity Low_complexity 1 177 0 1 856 1502 11 6 0 chrX 35614769 35614945 -131035351 + (TTC)n Simple_repeat Simple_repeat 2 178 0 1 856 1166 69 7 0 chrX 35614962 35615107 -131035189 - B1_Mus1 SINE Alu -2 146 1 1 856 213 121 0 0 chrX 35615897 35615930 -131034366 + (TCCCC)n Simple_repeat Simple_repeat 2 34 0 1 856 384 336 0 9 chrX 35616809 35616917 -131033379 + PB1D10 SINE Alu 1 107 -10 1 856 21 0 0 0 chrX 35617022 35617043 -131033253 + AT_rich Low_complexity Low_complexity 1 21 0 1 856 246 333 59 0 chrX 35617055 35617157 -131033139 + L2a LINE L2 3319 3426 0 2 856 421 308 0 83 chrX 35617244 35617400 -131032896 + B3A SINE B2 1 143 -55 2 856 315 0 0 0 chrX 35617408 35617443 -131032853 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 856 681 235 59 41 chrX 35617611 35617882 -131032414 - L1M4 LINE L1 -3665 2979 2704 2 856 7576 114 5 6 chrX 35618144 35619898 -131030398 - Lx LINE L1 -3 6651 4897 2 856 385 231 211 9 chrX 35619901 35620010 -131030286 - Lx8 LINE L1 -460 7013 6871 2 856 486 0 0 0 chrX 35620333 35620387 -131029909 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 2 856 1102 59 15 0 chrX 35620387 35620522 -131029774 - B1_Mm SINE Alu -10 137 1 2 856 1801 274 81 22 chrX 35620822 35621463 -131028833 + HERVL74-int LTR ERVL 1170 1848 -3837 2 856 451 331 7 7 chrX 35621562 35621702 -131028594 + HERVL74-int LTR ERVL 2546 2685 -3000 2 856 1040 292 128 0 chrX 35621722 35622129 -131028167 + HERVL74-int LTR ERVL 2743 3201 -2484 2 856 1040 319 88 24 chrX 35622486 35622939 -131027357 + LTR53 LTR ERVL 22 503 -16 2 856 324 289 92 26 chrX 35622952 35623105 -131027191 - L1M4 LINE L1 -4506 2234 2072 2 856 1914 139 16 0 chrX 35623129 35623445 -131026851 - ORR1A4 LTR MaLR -8 321 1 2 856 398 310 18 0 chrX 35623472 35623585 -131026711 - PB1D10 SINE Alu -2 115 1 2 856 1248 54 0 0 chrX 35623668 35623816 -131026480 - B1_Mus1 SINE Alu 0 148 1 2 856 352 263 40 10 chrX 35623822 35623922 -131026374 - PB1D7 SINE Alu -6 114 12 2 856 718 300 107 33 chrX 35623935 35624508 -131025788 - L1M4 LINE L1 -4759 1887 1273 2 856 602 229 13 60 chrX 35624511 35624636 -131025660 - B1_Mus2 SINE Alu -5 142 20 2 856 4975 53 15 0 chrX 35624636 35625244 -131025052 + L1_Mus2 LINE L1 5950 6566 0 2 856 602 229 13 60 chrX 35625244 35625267 -131025029 - B1_Mus2 SINE Alu -128 19 1 2 856 849 326 115 60 chrX 35625388 35625709 -131024587 - L1M4 LINE L1 -5377 1165 813 2 856 3281 43 10 2 chrX 35625709 35626106 -131024190 + MTB LTR MaLR 1 400 0 2 856 849 326 115 60 chrX 35626106 35626722 -131023574 - L1M4 LINE L1 -5730 812 176 2 856 800 261 5 14 chrX 35626730 35626944 -131023352 - B3 SINE B2 -4 212 1 2 856 360 64 0 0 chrX 35626969 35627016 -131023280 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 856 800 261 5 14 chrX 35627728 35627942 -131022354 + B3 SINE B2 1 212 -4 2 856 22 35 0 0 chrX 35628050 35628079 -131022217 + AT_rich Low_complexity Low_complexity 1 29 0 2 856 423 338 83 45 chrX 35628329 35628627 -131021669 + L1MC4 LINE L1 6169 6473 -1409 2 856 252 77 0 0 chrX 35628627 35628666 -131021630 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 856 1123 60 0 0 chrX 35628666 35628800 -131021496 - B1_Mus1 SINE Alu -10 138 5 2 856 423 338 83 45 chrX 35628800 35628922 -131021374 + L1MC4 LINE L1 6474 6605 -1277 2 856 1214 95 0 6 chrX 35628969 35629149 -131021147 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 2 856 902 277 139 15 chrX 35629150 35629626 -131020670 + L1MC4 LINE L1 6745 7279 -763 2 856 7638 66 19 6 chrX 35629626 35630935 -131019361 + L1_Mus2 LINE L1 5241 6566 0 2 856 841 256 9 19 chrX 35631149 35631360 -131018936 + B3 SINE B2 4 212 -4 2 856 1020 260 51 37 chrX 35631387 35631762 -131018534 + L1MC4 LINE L1 7444 7823 -219 2 856 745 238 20 41 chrX 35632133 35632330 -131017966 - B3A SINE B2 -5 193 1 2 856 984 186 93 0 chrX 35632523 35632716 -131017580 + B3 SINE B2 1 211 -5 2 856 317 240 13 13 chrX 35633664 35633740 -131016556 + ID4_ SINE ID 8 83 0 2 856 237 281 0 0 chrX 35634007 35634103 -131016193 + (TG)n Simple_repeat Simple_repeat 1 96 0 2 856 540 270 67 107 chrX 35634103 35634327 -131015969 - B4A SINE B4 -76 216 2 2 856 266 284 61 55 chrX 35634328 35634492 -131015804 + L1M5 LINE L1 4728 4892 -1254 2 856 816 234 23 32 chrX 35634519 35634735 -131015561 + B3 SINE B2 3 216 0 2 856 297 242 45 0 chrX 35634738 35634804 -131015492 - B2_Mm2 SINE B2 -80 115 47 2 856 358 150 50 0 chrX 35634793 35634853 -131015443 - B3 SINE B2 -127 89 27 2 856 524 187 16 0 chrX 35634858 35634981 -131015315 + ORR1A4-int LTR MaLR 144 268 -1241 2 856 4626 121 19 95 chrX 35634971 35635877 -131014419 + ORR1A4-int LTR MaLR 1127 1963 0 2 856 2216 93 14 74 chrX 35635877 35636227 -131014069 + ORR1A4 LTR MaLR 1 329 0 2 856 309 345 122 21 chrX 35636228 35636465 -131013831 - L1M4 LINE L1 -3488 2658 2398 2 856 885 242 24 5 chrX 35636639 35636847 -131013449 - B3 SINE B2 -4 212 1 2 856 507 33 0 0 chrX 35636961 35637022 -131013274 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 2 856 318 50 0 0 chrX 35637029 35637069 -131013227 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 2 856 1127 62 0 7 chrX 35637070 35637216 -131013080 - B1_Mus2 SINE Alu -1 146 2 2 856 225 281 93 37 chrX 35637289 35637396 -131012900 + L1M5 LINE L1 5537 5649 -513 2 856 230 200 40 0 chrX 35637648 35637698 -131012598 + G-rich Low_complexity Low_complexity 1 52 0 2 856 314 257 29 0 chrX 35637783 35637888 -131012408 - RMER20B LTR ERVK -271 356 249 2 856 2455 186 233 16 chrX 35639449 35640343 -131009953 + Lx5 LINE L1 5869 7054 -4 2 856 3845 53 0 0 chrX 35640343 35640810 -131009486 - L1_Mus2 LINE L1 -498 6068 5602 2 856 2861 56 3 3 chrX 35640810 35641169 -131009127 + L1_Mus2 LINE L1 6207 6565 -1 2 856 23 0 0 0 chrX 35641169 35641192 -131009104 + AT_rich Low_complexity Low_complexity 1 23 0 2 856 25 75 0 0 chrX 35641237 35641290 -131009006 + AT_rich Low_complexity Low_complexity 1 53 0 2 856 365 167 13 0 chrX 35641343 35641421 -131008875 + CT-rich Low_complexity Low_complexity 3 81 0 2 856 321 162 12 3 chrX 35641651 35641723 -131008573 - B1F1 SINE Alu -221 74 1 2 856 324 219 179 16 chrX 35641733 35641984 -131008312 - L1M4b LINE L1 -4034 3300 3009 2 856 1377 249 92 22 chrX 35642052 35642467 -131007829 + L1MC1 LINE L1 5888 6331 -2 2 856 228 354 0 0 chrX 35642480 35642562 -131007734 + ID4 SINE ID 2 83 0 2 856 279 79 0 0 chrX 35642641 35642679 -131007617 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2 856 6755 50 2 0 chrX 35642696 35643512 -131006784 - L1_Mus1 LINE L1 0 6567 5750 2 856 577 68 0 0 chrX 35643512 35643585 -131006711 + L1_Mm LINE L1 5389 5461 -422 2 856 2407 61 0 0 chrX 35643852 35644145 -131006151 + L1_Mm LINE L1 5447 5739 -144 2 856 701 200 7 35 chrX 35644153 35644298 -131005998 - B1_Mur3 SINE Alu -7 142 2 2 856 333 0 0 0 chrX 35645088 35645125 -131005171 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 856 426 250 37 9 chrX 35645374 35645483 -131004813 + PB1D10 SINE Alu 1 112 -5 2 856 373 300 17 43 chrX 35645575 35645690 -131004606 + PB1D10 SINE Alu 1 112 -5 2 856 208 245 0 19 chrX 35645690 35645744 -131004552 + GA-rich Low_complexity Low_complexity 1 53 0 2 856 237 235 45 34 chrX 35646437 35646525 -131003771 - MIR SINE MIR -55 207 119 2 856 385 305 89 51 chrX 35646568 35646782 -131003514 + LTR40b LTR ERVL 13 234 -228 2 856 765 141 0 30 chrX 35646790 35646922 -131003374 + B1_Mur4 SINE Alu 2 129 -21 2 856 500 118 32 0 chrX 35646933 35647026 -131003270 + A-rich Low_complexity Low_complexity 2 97 0 2 856 195 129 0 0 chrX 35647024 35647055 -131003241 + (GGGA)n Simple_repeat Simple_repeat 3 33 0 2 856 433 302 73 51 chrX 35647102 35647280 -131003016 + LTR40b LTR ERVL 271 452 -10 2 856 239 266 38 0 chrX 35648078 35648157 -131002139 - MIR SINE MIR -76 132 51 2 856 1257 146 61 5 chrX 35648652 35648865 -131001431 - URR1B DNA MER1_type 0 225 1 2 856 219 357 46 35 chrX 35649525 35649699 -131000597 + MER5A DNA MER1_type 1 176 -13 2 856 188 274 16 31 chrX 35649781 35649845 -131000451 + L2c LINE L2 3102 3164 -223 2 857 212 354 0 12 chrX 35652258 35652341 -130997955 - ID4 SINE ID 0 83 2 2 857 353 136 15 0 chrX 35652760 35652826 -130997470 + (TG)n Simple_repeat Simple_repeat 1 67 0 2 857 278 325 73 8 chrX 35655218 35655342 -130994954 - RSINE1 SINE B4 -32 133 2 2 857 519 102 0 0 chrX 35656079 35656167 -130994129 + (TC)n Simple_repeat Simple_repeat 1 88 0 2 857 282 29 0 0 chrX 35656167 35656202 -130994094 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 857 271 320 46 39 chrX 35656214 35656344 -130993952 - B3 SINE B2 -61 155 25 2 857 10197 82 7 0 chrX 35656365 35658426 -130991870 - L1_Mus1 LINE L1 -1 6566 4492 2 857 21 0 0 0 chrX 35658963 35658984 -130991312 + AT_rich Low_complexity Low_complexity 1 21 0 2 857 4827 122 34 64 chrX 35659396 35660261 -130990035 - Lx2A LINE L1 -2 7006 6168 2 857 226 203 15 15 chrX 35660549 35660614 -130989682 + (TTTG)n Simple_repeat Simple_repeat 2 66 0 2 857 1312 236 78 17 chrX 35660649 35661046 -130989250 + MTD LTR MaLR 3 405 -14 2 857 206 116 23 0 chrX 35661142 35661185 -130989111 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 2 857 364 296 31 31 chrX 35661211 35661340 -130988956 - RSINE1 SINE B4 -29 136 8 2 857 1735 181 93 38 chrX 35661824 35662134 -130988162 - MTC LTR MaLR 0 421 90 2 857 2671 74 0 3 chrX 35662134 35662488 -130987808 - L1Md_F2 LINE L1 0 6582 6230 2 857 1735 181 93 38 chrX 35662488 35662574 -130987722 - MTC LTR MaLR -332 89 4 2 857 256 305 84 8 chrX 35662589 35662708 -130987588 + L1MC4 LINE L1 7442 7569 -473 2 857 1590 62 29 0 chrX 35663139 35663347 -130986949 - L1_Mus1 LINE L1 0 6567 6354 2 857 503 253 20 40 chrX 35663671 35663823 -130986473 + B4A SINE B4 1 149 -143 2 857 374 304 0 0 chrX 35664008 35664100 -130986196 + ID_B1 SINE B4 85 176 -48 2 857 285 265 15 0 chrX 35664112 35664180 -130986116 + ID4 SINE ID 8 76 -7 2 857 192 77 0 0 chrX 35664181 35664207 -130986089 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2 857 2683 96 57 9 chrX 35664838 35665257 -130985039 - Lx2A LINE L1 0 7008 6570 2 857 225 154 0 0 chrX 35665304 35665343 -130984953 + (CATA)n Simple_repeat Simple_repeat 2 40 0 2 857 294 274 0 0 chrX 35665421 35665556 -130984740 + (CA)n Simple_repeat Simple_repeat 2 136 0 2 857 311 196 0 0 chrX 35667460 35667511 -130982785 - B3 SINE B2 -164 52 2 2 857 183 42 0 0 chrX 35667553 35667577 -130982719 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 857 856 275 5 5 chrX 35667812 35668002 -130982294 - B3A SINE B2 -8 190 1 2 857 531 138 0 0 chrX 35670204 35670291 -130980005 + (CA)n Simple_repeat Simple_repeat 2 88 0 2 857 336 330 33 25 chrX 35671999 35672120 -130978176 + MIR3 SINE MIR 5 126 -82 2 857 188 167 0 0 chrX 35672696 35672726 -130977570 - L2b LINE L2 -10 3365 3336 2 857 656 191 228 18 chrX 35672752 35672870 -130977426 - Lx9 LINE L1 -3 7641 7478 2 857 234 0 0 0 chrX 35672870 35672896 -130977400 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 857 656 191 228 18 chrX 35672896 35672996 -130977300 - Lx9 LINE L1 -167 7477 7378 2 857 216 0 0 0 chrX 35673630 35673654 -130976642 + (T)n Simple_repeat Simple_repeat 1 24 0 3 857 285 210 0 0 chrX 35673776 35673838 -130976458 + GA-rich Low_complexity Low_complexity 3 64 0 3 857 202 310 68 49 chrX 35674176 35674339 -130975957 + MIRc SINE MIR 14 179 -89 3 857 180 111 0 0 chrX 35674788 35674815 -130975481 + (A)n Simple_repeat Simple_repeat 1 27 0 3 857 613 219 43 12 chrX 35675743 35675909 -130974387 - MIRb SINE MIR -60 208 20 3 857 550 286 62 10 chrX 35676944 35677138 -130973158 - MIRb SINE MIR 0 268 65 3 857 24 0 0 0 chrX 35678424 35678448 -130971848 + AT_rich Low_complexity Low_complexity 1 24 0 3 857 1056 270 21 41 chrX 35678868 35679158 -130971138 + ORR1E LTR MaLR 74 357 -2 3 857 232 352 0 83 chrX 35679175 35679271 -130971025 + PB1D10 SINE Alu 10 97 -20 3 857 560 27 27 0 chrX 35679283 35679356 -130970940 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 3 857 256 299 124 43 chrX 35679529 35679690 -130970606 - MIRb SINE MIR -27 241 68 3 857 314 215 153 62 chrX 35679718 35679862 -130970434 + MER5A1 DNA MER1_type 3 159 -7 3 857 497 307 131 60 chrX 35680236 35680503 -130969793 + B4A SINE B4 3 288 -4 3 857 1322 183 9 0 chrX 35681991 35682210 -130968086 + URR1B DNA MER1_type 2 222 -3 3 857 379 255 184 0 chrX 35682864 35682962 -130967334 + PB1D10 SINE Alu 1 116 -1 3 857 1193 221 0 0 chrX 35683050 35683254 -130967042 + B3 SINE B2 10 213 -3 3 857 22 0 0 0 chrX 35683551 35683573 -130966723 + AT_rich Low_complexity Low_complexity 1 22 0 3 857 983 73 0 7 chrX 35683580 35683718 -130966578 + (TTTCC)n Simple_repeat Simple_repeat 4 140 0 3 857 459 0 0 0 chrX 35683955 35684006 -130966290 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 857 208 357 12 12 chrX 35684558 35684643 -130965653 - L2a LINE L2 -1 3425 3341 3 857 215 171 0 0 chrX 35684957 35684992 -130965304 - ID4 SINE ID -47 36 2 3 857 442 267 0 47 chrX 35686213 35686319 -130963977 - MIR3 SINE MIR -48 160 60 3 857 181 164 57 129 chrX 35687148 35687218 -130963078 + L3 LINE CR1 2091 2155 -2334 3 857 190 103 0 0 chrX 35689239 35689268 -130961028 - MIRc SINE MIR -223 45 17 3 857 981 118 255 33 chrX 35690116 35690300 -130959996 - URR1B DNA MER1_type 0 225 1 3 857 205 146 20 20 chrX 35690980 35691029 -130959267 + GA-rich Low_complexity Low_complexity 1 49 0 3 857 3156 65 0 3 chrX 35691325 35691708 -130958588 + L1Md_F2 LINE L1 6201 6582 0 3 857 263 367 82 24 chrX 35691926 35692096 -130958200 - LTR33 LTR ERVL -335 180 1 3 857 389 335 86 50 chrX 35692424 35692644 -130957652 - MLT1K LTR MaLR -102 493 266 3 857 905 301 19 32 chrX 35692659 35692979 -130957317 + L1_Mur3 LINE L1 3549 3871 -2009 3 857 1236 171 76 0 chrX 35692979 35693189 -130957107 + URR1A DNA MER1_type 1 226 0 3 857 905 301 19 32 chrX 35693189 35693280 -130957016 + L1_Mur3 LINE L1 3872 3955 -1925 3 857 556 231 107 0 chrX 35693282 35693403 -130956893 + B3 SINE B2 2 135 -81 3 857 868 196 7 0 chrX 35693452 35693590 -130956706 + B1_Mur2 SINE Alu 1 139 -10 3 857 669 45 0 0 chrX 35693592 35693681 -130956615 + (GA)n Simple_repeat Simple_repeat 2 90 0 3 857 846 277 62 23 chrX 35693681 35693988 -130956308 + L1M2 LINE L1 3991 4309 -1834 3 857 32 26 0 0 chrX 35694120 35694159 -130956137 + AT_rich Low_complexity Low_complexity 1 39 0 3 857 206 196 0 35 chrX 35694499 35694557 -130955739 + GA-rich Low_complexity Low_complexity 1 56 0 3 857 342 292 8 16 chrX 35694887 35695009 -130955287 + L1M4 LINE L1 4234 4354 -1792 3 857 876 278 19 0 chrX 35695028 35695240 -130955056 + B3 SINE B2 1 216 0 3 857 22 0 0 0 chrX 35695243 35695265 -130955031 + AT_rich Low_complexity Low_complexity 1 22 0 3 857 411 310 9 27 chrX 35695267 35695416 -130954880 - L1M2 LINE L1 -1287 4859 4709 3 857 2570 128 22 6 chrX 35695525 35695886 -130954410 + ORR1B2 LTR MaLR 1 367 0 3 857 541 294 37 6 chrX 35696486 35696647 -130953649 - MER20 DNA MER1_type -1 218 53 3 857 335 260 0 27 chrX 35696652 35696727 -130953569 + ID4_ SINE ID 8 80 -3 3 857 610 352 96 32 chrX 35696984 35697327 -130952969 - LTR75 LTR ERVL -47 515 151 3 857 1872 211 126 77 chrX 35697682 35697722 -130952574 - MT2A LTR ERVL 0 533 495 3 857 459 0 0 0 chrX 35697722 35697773 -130952523 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 857 1872 211 126 77 chrX 35697773 35698240 -130952056 - MT2A LTR ERVL -39 494 1 3 857 248 333 27 0 chrX 35698267 35698342 -130951954 - ID4 SINE ID -5 78 2 3 857 246 95 0 0 chrX 35698511 35698553 -130951743 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 857 2316 129 52 68 chrX 35698682 35699082 -130951214 + ORR1B1 LTR MaLR 1 394 0 3 857 456 198 78 43 chrX 35699329 35699445 -130950851 + MLT1A1 LTR MaLR 268 387 -21 3 857 1056 134 0 26 chrX 35699647 35699800 -130950496 + B1_Mur4 SINE Alu 2 150 0 3 857 23 0 0 0 chrX 35699907 35699930 -130950366 + AT_rich Low_complexity Low_complexity 1 23 0 3 857 392 248 0 49 chrX 35699962 35700059 -130950237 + B1F SINE Alu 54 144 -5 3 857 28 48 0 0 chrX 35700156 35700198 -130950098 + AT_rich Low_complexity Low_complexity 1 42 0 3 857 849 237 66 0 chrX 35700296 35700507 -130949789 - L1MB2 LINE L1 -123 6048 5824 3 857 273 238 0 125 chrX 35700537 35700609 -130949687 - B4A SINE B4 0 292 230 3 857 906 276 97 15 chrX 35700630 35700687 -130949609 - B4 SINE B4 0 292 228 3 857 619 329 49 35 chrX 35700687 35700974 -130949322 - B4A SINE B4 0 292 2 3 857 906 276 97 15 chrX 35700974 35701185 -130949111 - B4 SINE B4 -65 227 2 3 857 472 248 7 52 chrX 35701186 35701339 -130948957 - L1MB2 LINE L1 -340 5831 5686 3 857 416 261 106 0 chrX 35701360 35701552 -130948744 - L1MB2 LINE L1 -603 5580 5366 3 857 1189 229 181 0 chrX 35701571 35701885 -130948411 - MTE2b LTR MaLR -8 371 1 3 857 263 106 43 0 chrX 35701929 35701976 -130948320 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 3 857 555 282 156 36 chrX 35701977 35702393 -130947903 - L1MEc LINE L1 -5827 573 108 3 857 1850 141 40 78 chrX 35702510 35702527 -130947769 - ORR1C1 LTR MaLR -45 333 322 3 857 2927 103 62 11 chrX 35702527 35702960 -130947336 + Lx2 LINE L1 6543 6997 0 3 857 1850 141 40 78 chrX 35702960 35703288 -130947008 - ORR1C1 LTR MaLR -57 321 1 3 857 1351 88 16 21 chrX 35703523 35703564 -130946732 - B2_Mm2 SINE B2 -8 187 150 3 857 441 0 0 0 chrX 35703564 35703613 -130946683 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 857 1351 88 16 21 chrX 35703613 35703757 -130946539 - B2_Mm2 SINE B2 -46 149 3 3 857 541 255 0 0 chrX 35703768 35703874 -130946422 - PB1D10 SINE Alu -7 110 5 3 857 280 375 88 37 chrX 35703909 35704125 -130946171 - MLT2F LTR ERVL -85 578 352 3 857 381 302 51 80 chrX 35704185 35704361 -130945935 + RMER5 LTR ERV1 1 171 -363 3 857 1095 268 13 17 chrX 35704382 35704656 -130945640 + RMER5 LTR ERV1 225 497 -37 3 857 2199 127 41 0 chrX 35704656 35704970 -130945326 + ORR1A2 LTR MaLR 1 327 0 3 857 1095 268 13 17 chrX 35704970 35704995 -130945301 + RMER5 LTR ERV1 498 522 -12 3 857 609 307 117 68 chrX 35705029 35705121 -130945175 - ORR1E LTR MaLR 0 359 268 3 857 369 0 0 0 chrX 35705121 35705162 -130945134 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 857 609 307 117 68 chrX 35705162 35705394 -130944902 - ORR1E LTR MaLR -92 267 20 3 857 252 86 0 0 chrX 35705396 35705431 -130944865 + (T)n Simple_repeat Simple_repeat 1 35 0 3 857 415 293 318 20 chrX 35705545 35705737 -130944559 - MLT2F LTR ERVL -400 263 15 3 857 1751 163 135 3 chrX 35705764 35706097 -130944199 - MTC LTR MaLR -44 377 1 3 857 473 246 8 0 chrX 35706507 35706625 -130943671 - L1MA6 LINE L1 0 6300 6182 3 857 420 289 99 67 chrX 35707099 35707278 -130943018 + LTR52 LTR ERVL 103 296 -125 3 857 2480 138 14 6 chrX 35707278 35707642 -130942654 + ORR1B2 LTR MaLR 1 367 0 3 857 420 289 99 67 chrX 35707642 35707685 -130942611 + LTR52 LTR ERVL 297 332 -89 3 857 1382 269 54 12 chrX 35707735 35708141 -130942155 + LTR52-int LTR ERVL 7 429 -3127 3 857 377 330 0 17 chrX 35708143 35708260 -130942036 + PB1D10 SINE Alu 1 115 -2 3 857 1296 314 77 39 chrX 35708269 35708802 -130941494 + LTR52-int LTR ERVL 3004 3556 0 3 857 241 356 0 40 chrX 35708834 35708910 -130941386 - tRNA-Ala-GCG tRNA tRNA -1 74 2 3 857 297 254 0 31 chrX 35708854 35708919 -130941377 - ID4_ SINE ID -20 63 1 3 857 356 224 25 178 chrX 35708921 35708970 -130941326 + LTR52 LTR ERVL 16 65 -356 3 857 1014 212 59 20 chrX 35708970 35709172 -130941124 + B3 SINE B2 1 210 -6 3 857 356 224 25 178 chrX 35709172 35709285 -130941011 + LTR52 LTR ERVL 66 153 -268 3 857 241 88 140 0 chrX 35709285 35709342 -130940954 - RMER17A LTR ERVK -1 750 686 3 857 3484 97 3 94 chrX 35709342 35709969 -130940327 - RMER17A LTR ERVK -173 578 9 3 857 360 0 0 0 chrX 35710021 35710061 -130940235 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 857 1499 156 86 0 chrX 35710087 35710356 -130939940 - MTC-int LTR MaLR -341 917 626 3 857 21 0 0 0 chrX 35710363 35710384 -130939912 + AT_rich Low_complexity Low_complexity 1 21 0 3 857 3889 77 7 11 chrX 35710385 35710926 -130939370 - Lx3_Mus LINE L1 -47 6962 6424 3 857 1816 96 58 4 chrX 35710926 35711187 -130939109 + Lx3_Mus LINE L1 6719 6993 -16 3 857 22 56 0 0 chrX 35711187 35711223 -130939073 + AT_rich Low_complexity Low_complexity 1 36 0 3 857 611 311 83 48 chrX 35711375 35712087 -130938209 + L1M2 LINE L1 2004 2737 -3851 3 857 1023 148 0 7 chrX 35712110 35712260 -130938036 + B1_Mur4 SINE Alu 1 149 -1 3 857 614 266 14 14 chrX 35712280 35712425 -130937871 + B1_Mur1 SINE Alu 2 146 -3 3 857 520 261 130 29 chrX 35712483 35712732 -130937564 + L1M2 LINE L1 2836 3113 -3732 3 857 2345 144 183 75 chrX 35712732 35712768 -130937528 - MT2A LTR ERVL 0 533 498 3 857 387 0 0 0 chrX 35712768 35712811 -130937485 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 857 2345 144 183 75 chrX 35712811 35713255 -130937041 - MT2A LTR ERVL -36 497 1 3 857 520 261 130 29 chrX 35713255 35713281 -130937015 + L1M2 LINE L1 3114 3139 -3706 3 857 693 276 48 14 chrX 35713282 35713429 -130936867 + RSINE1 SINE B4 2 153 -12 3 857 477 50 0 0 chrX 35713443 35713503 -130936793 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 857 515 319 49 0 chrX 35713523 35713667 -130936629 + RSINE1 SINE B4 11 161 -4 3 857 261 211 102 34 chrX 35713706 35713824 -130936472 + L1M2 LINE L1 3620 3745 -3100 3 857 709 160 134 0 chrX 35713824 35713943 -130936353 + B1_Mur4 SINE Alu 3 137 -13 3 857 3262 258 66 20 chrX 35713974 35714208 -130936088 + Lx8 LINE L1 6336 6584 -889 3 857 231 36 0 0 chrX 35714208 35714236 -130936060 + (TAGA)n Simple_repeat Simple_repeat 2 29 0 3 857 3262 258 66 20 chrX 35714236 35714489 -130935807 + Lx8 LINE L1 6585 6857 -616 3 857 288 0 0 0 chrX 35714489 35714521 -130935775 + (GGTTG)n Simple_repeat Simple_repeat 5 36 0 4 857 3262 258 66 20 chrX 35714521 35714982 -130935314 + Lx8 LINE L1 6858 7328 -145 3 857 716 242 0 18 chrX 35715006 35715174 -130935122 - Lx6 LINE L1 -31 7429 7265 4 857 33203 77 1 17 chrX 35715177 35717678 -130932618 + L1_Mus1 LINE L1 218 2724 -3159 4 857 7562 67 3 0 chrX 35717678 35718568 -130931728 + RLTR13B1 LTR ERVK 1 893 0 4 857 33203 90 2 30 chrX 35718568 35719135 -130931161 + L1_Mus1 LINE L1 2725 3235 -2648 4 857 2527 112 3 75 chrX 35719135 35719522 -130930774 + RLTR10D LTR ERVK 1 359 0 4 857 33203 88 3 21 chrX 35719522 35722931 -130927365 + L1_Mus1 LINE L1 3236 6567 0 4 857 649 211 42 0 chrX 35722935 35723077 -130927219 - Lx6 LINE L1 -177 7283 7136 4 857 268 61 11 0 chrX 35723195 35723233 -130927063 + ORR1B1 LTR MaLR 337 386 -8 4 857 962 319 60 10 chrX 35723305 35724106 -130926190 + L1M2 LINE L1 3730 4570 -2275 3 857 3301 56 0 0 chrX 35724166 35724592 -130925704 + L1_Mm LINE L1 5405 5830 -53 4 857 441 294 0 48 chrX 35724590 35724779 -130925517 + L1M2 LINE L1 4570 4749 -2096 3 857 433 317 82 55 chrX 35724900 35725042 -130925254 + L1MA5 LINE L1 4226 4372 -1508 4 857 894 169 0 0 chrX 35725042 35725184 -130925112 + B1_Mus1 SINE Alu 2 143 -5 4 857 282 116 0 0 chrX 35725191 35725234 -130925062 + (CATA)n Simple_repeat Simple_repeat 2 44 0 4 857 659 269 92 25 chrX 35725234 35725560 -130924736 + L1MA5 LINE L1 4373 4744 -1399 4 857 337 319 43 8 chrX 35725560 35725677 -130924619 + B4A SINE B4 8 128 -164 4 857 1486 254 50 61 chrX 35725738 35726380 -130923916 + L1MA5 LINE L1 5298 5932 -368 4 857 956 118 7 14 chrX 35726707 35726853 -130923443 + B1_Mur4 SINE Alu 6 150 0 4 857 491 219 21 0 chrX 35726888 35726984 -130923312 - B1_Mur2 SINE Alu -1 148 51 4 857 568 146 0 0 chrX 35726980 35727062 -130923234 - B3 SINE B2 -131 85 4 4 857 274 269 46 32 chrX 35727814 35727913 -130922383 + B1_Mur4 SINE Alu 16 115 -5 4 857 323 359 54 14 chrX 35727922 35728069 -130922227 + HAL1-3A_ME LINE L1 2285 2437 -421 4 857 495 159 35 9 chrX 35729322 35729436 -130920860 - Lx LINE L1 -1 6653 6537 4 857 260 312 0 59 chrX 35729579 35729664 -130920632 - ID2 SINE ID -1 82 3 4 857 29 0 0 0 chrX 35730216 35730245 -130920051 + AT_rich Low_complexity Low_complexity 1 29 0 4 857 354 198 34 23 chrX 35731927 35731984 -130918312 + ORR1A2 LTR MaLR 1 58 -269 4 857 1399 63 5 45 chrX 35731984 35732088 -130918208 + B2_Mm1t SINE B2 2 104 -89 4 857 2952 46 43 0 chrX 35732088 35732460 -130917836 - RLTR10 LTR ERVK -2 388 1 4 857 1399 63 5 45 chrX 35732460 35732555 -130917741 + B2_Mm1t SINE B2 105 193 0 4 857 2019 73 15 0 chrX 35732555 35732827 -130917469 + ORR1A2 LTR MaLR 52 327 0 4 857 4764 126 37 4 chrX 35732827 35733579 -130916717 + ORR1A2-int LTR MaLR 1186 1962 -1 4 857 2462 83 6 0 chrX 35733580 35733905 -130916391 + ORR1A2 LTR MaLR 1 327 0 4 857 224 254 23 15 chrX 35733987 35734063 -130916233 + CT-rich Low_complexity Low_complexity 1 76 0 4 857 866 72 46 0 chrX 35734063 35734216 -130916080 + (TTCTC)n Simple_repeat Simple_repeat 5 164 0 4 857 249 284 0 161 chrX 35734219 35734349 -130915947 - B1_Mm SINE Alu -36 111 3 4 857 606 294 103 5 chrX 35734349 35734422 -130915874 - ID_B1 SINE B4 -132 92 2 4 857 235 386 20 10 chrX 35734774 35734876 -130915420 + MER5A DNA MER1_type 26 128 -61 4 857 2320 72 119 11 chrX 35735005 35735357 -130914939 + RLTR10 LTR ERVK 1 390 0 4 857 438 20 0 0 chrX 35735478 35735529 -130914767 + (TCC)n Simple_repeat Simple_repeat 3 53 0 4 857 1152 83 0 0 chrX 35735535 35735680 -130914616 - B1_Mus1 SINE Alu -3 145 1 4 857 6393 172 47 7 chrX 35736360 35737590 -130912706 - Lx9 LINE L1 -25 7619 6341 4 857 12564 148 59 28 chrX 35737590 35738074 -130912222 - Lx9 LINE L1 -1681 5963 5421 4 857 192 97 0 0 chrX 35738074 35738105 -130912191 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 857 12564 141 57 30 chrX 35738105 35740258 -130910038 - Lx9 LINE L1 -427 5420 3203 4 857 3412 147 121 62 chrX 35740258 35741137 -130909159 - RLTR25B LTR ERVK 0 1028 1 4 857 6705 180 61 16 chrX 35741145 35743478 -130906818 - Lx9 LINE L1 -2700 3180 621 4 857 480 250 162 37 chrX 35743969 35744160 -130906136 - ID_B1 SINE B4 -8 216 2 4 857 501 239 56 37 chrX 35744378 35744539 -130905757 + RSINE1 SINE B4 2 165 0 4 857 309 339 71 6 chrX 35744602 35744771 -130905525 - L1M5 LINE L1 -690 5434 5255 4 857 387 0 0 0 chrX 35745201 35745244 -130905052 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 857 952 158 0 0 chrX 35745252 35745398 -130904898 + B1_Mus1 SINE Alu 1 146 -2 4 857 1530 81 5 0 chrX 35745484 35745694 -130904602 - L1_Mus2 LINE L1 0 6566 6356 4 857 4063 79 18 7 chrX 35745774 35746334 -130903962 - L1_Mus3 LINE L1 -7 6631 6066 4 857 568 293 82 10 chrX 35746450 35746657 -130903639 - B4A SINE B4 -69 223 2 4 857 485 287 117 26 chrX 35746669 35746977 -130903319 - L1MA6 LINE L1 -10 6290 5955 4 857 3558 65 15 0 chrX 35746998 35747456 -130902840 - L1_Mus2 LINE L1 -1 6565 6101 4 857 195 341 53 32 chrX 35747558 35747652 -130902644 + MIRb SINE MIR 60 155 -113 4 857 275 207 0 33 chrX 35747906 35747996 -130902300 + Lx4B LINE L1 6967 7053 -5 4 857 2275 257 56 69 chrX 35748090 35749033 -130901263 + Lx5 LINE L1 6332 7038 -12 4 857 30 0 0 0 chrX 35749041 35749071 -130901225 + AT_rich Low_complexity Low_complexity 1 30 0 4 857 327 278 139 0 chrX 35749083 35749234 -130901062 + Lx8 LINE L1 5625 5796 -1677 4 857 577 216 196 0 chrX 35749234 35749387 -130900909 + B3A SINE B2 1 183 -15 4 857 439 227 47 87 chrX 35749545 35749700 -130900596 - B3 SINE B2 -3 195 43 4 857 378 0 0 0 chrX 35749731 35749773 -130900523 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 857 303 337 33 11 chrX 35749817 35749907 -130900389 - B4A SINE B4 0 292 201 4 857 238 256 0 11 chrX 35749976 35750063 -130900233 + A-rich Low_complexity Low_complexity 3 88 0 4 857 452 346 68 3 chrX 35750650 35750893 -130899403 + L2a LINE L2 2918 3181 -245 4 857 285 362 126 66 chrX 35750897 35751095 -130899201 + B4A SINE B4 2 211 -81 4 857 250 292 220 22 chrX 35751466 35751648 -130898648 + MIRb SINE MIR 2 219 -49 4 857 535 209 8 76 chrX 35751687 35751806 -130898490 + PB1D9 SINE Alu 9 119 -1 4 857 490 208 205 16 chrX 35751893 35752015 -130898281 + B1_Mur4 SINE Alu 5 149 -1 4 857 455 266 35 17 chrX 35752389 35752504 -130897792 + PB1D10 SINE Alu 1 117 0 4 857 595 64 0 0 chrX 35752569 35752647 -130897649 - B2_Mm2 SINE B2 -117 78 1 4 857 207 271 83 17 chrX 35753474 35753534 -130896762 - L4 LINE RTE -916 1113 1050 4 857 592 161 290 11 chrX 35753754 35753930 -130896366 - URR1B DNA MER1_type 0 225 1 4 857 231 306 111 0 chrX 35754696 35754768 -130895528 - ID4_ SINE ID -3 80 1 4 857 212 196 22 0 chrX 35754778 35754824 -130895472 - B4 SINE B4 -245 47 1 4 857 342 175 0 16 chrX 35755836 35755904 -130894392 + ID4_ SINE ID 7 73 -10 4 857 257 218 125 11 chrX 35755843 35755931 -130894365 + ID_B1 SINE B4 14 111 -113 4 857 655 250 157 5 chrX 35755973 35756158 -130894138 - B3 SINE B2 0 216 4 4 857 429 282 55 0 chrX 35757593 35757703 -130892593 + B1F2 SINE Alu 5 120 -29 4 857 962 131 28 0 chrX 35757892 35758037 -130892259 + B1_Mur4 SINE Alu 1 149 -1 4 857 306 219 49 0 chrX 35759241 35759323 -130890973 + L1M3 LINE L1 5512 5597 -700 4 857 1030 100 7 0 chrX 35759348 35759488 -130890808 + B1_Mus2 SINE Alu 1 141 -6 4 857 851 75 8 0 chrX 35759489 35759609 -130890687 + (GAAA)n Simple_repeat Simple_repeat 3 123 0 4 857 183 80 0 0 chrX 35759611 35759636 -130890660 + (GGA)n Simple_repeat Simple_repeat 3 27 0 4 857 318 50 0 0 chrX 35759636 35759676 -130890620 + (GGGGA)n Simple_repeat Simple_repeat 3 42 0 4 857 482 255 85 16 chrX 35759870 35760083 -130890213 + L1M3 LINE L1 5571 5793 -396 4 857 213 213 0 0 chrX 35760088 35760135 -130890161 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 857 245 211 110 34 chrX 35760135 35760253 -130890043 + L1M1 LINE L1 5782 5908 -392 4 857 200 254 14 14 chrX 35760434 35760506 -130889790 + (TATAA)n Simple_repeat Simple_repeat 5 76 0 4 857 873 137 27 0 chrX 35760747 35760893 -130889403 + B1_Mur4 SINE Alu 1 150 0 4 857 274 195 11 58 chrX 35760893 35760980 -130889316 + A-rich Low_complexity Low_complexity 4 86 0 4 857 189 0 0 0 chrX 35761096 35761117 -130889179 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 857 628 274 54 47 chrX 35761524 35761800 -130888496 + Lx7 LINE L1 5594 5871 -1825 4 857 873 209 59 39 chrX 35762950 35763154 -130887142 + B3 SINE B2 2 209 -7 4 857 556 265 56 7 chrX 35763833 35763979 -130886317 - ID_B1 SINE B4 -46 246 90 4 857 587 265 13 13 chrX 35764121 35764270 -130886026 - B1_Mur1 SINE Alu 0 149 1 4 857 285 274 0 0 chrX 35764313 35764375 -130885921 - tRNA-Ala-GCY_ tRNA tRNA -11 64 3 4 857 255 191 186 5 chrX 35764414 35764485 -130885811 + B1_Mur4 SINE Alu 33 104 -46 4 857 243 0 0 0 chrX 35764486 35764513 -130885783 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 857 28757 102 30 20 chrX 35764521 35770845 -130879451 + L1_Mus1 LINE L1 172 6567 0 4 857 1220 41 0 0 chrX 35770879 35771025 -130879271 + B1_Mm SINE Alu 2 147 0 4 857 243 85 50 17 chrX 35771025 35771085 -130879211 + A-rich Low_complexity Low_complexity 4 65 0 4 857 552 246 97 100 chrX 35771230 35771519 -130878777 + B4A SINE B4 5 292 0 4 857 383 36 36 0 chrX 35772349 35772405 -130877891 + (TCTCTG)n Simple_repeat Simple_repeat 2 59 0 4 857 759 283 144 7 chrX 35775501 35775800 -130874496 + MER58B DNA MER1_type 2 341 0 4 857 544 319 0 0 chrX 35776355 35776496 -130873800 - ID_B1 SINE B4 0 224 84 4 857 423 0 0 0 chrX 35777711 35777758 -130872538 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 857 1108 254 54 14 chrX 35777761 35778037 -130872259 - B4 SINE B4 -4 288 2 4 857 448 202 163 32 chrX 35778150 35778273 -130872023 - B1F1 SINE Alu 0 149 11 4 857 194 0 39 0 chrX 35778918 35778944 -130871352 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 857 667 91 27 18 chrX 35778949 35779061 -130871235 - B1_Mus1 SINE Alu 0 148 36 4 857 711 171 0 73 chrX 35779062 35779213 -130871083 + Lx5 LINE L1 5749 5888 -1162 4 857 3930 158 45 10 chrX 35779213 35779904 -130870392 + Lx5 LINE L1 6335 7049 -1 4 857 1383 79 5 5 chrX 35780020 35780210 -130870086 - B2_Mm1a SINE B2 -3 190 1 5 857 345 304 111 43 chrX 35780342 35780459 -130869837 - RSINE1 SINE B4 -8 157 33 5 857 222 91 0 0 chrX 35780480 35780513 -130869783 + (TCTG)n Simple_repeat Simple_repeat 4 36 0 5 857 338 170 183 39 chrX 35780513 35780611 -130869685 - B1_Mm SINE Alu -5 142 30 5 857 624 204 38 0 chrX 35780647 35780779 -130869517 - B1_Mur1 SINE Alu -8 141 5 5 857 766 189 14 20 chrX 35780803 35780949 -130869347 - B1_Mm SINE Alu 0 147 3 5 857 329 245 26 45 chrX 35780953 35781073 -130869223 - L1MA5 LINE L1 -23 6277 6164 5 857 1260 27 0 0 chrX 35781073 35781220 -130869076 - B1_Mm SINE Alu 0 147 1 5 857 328 288 37 90 chrX 35781220 35781343 -130868953 - L1MA5 LINE L1 -133 6167 6047 5 857 224 350 0 0 chrX 35781499 35781559 -130868737 + ID4 SINE ID 1 60 -23 5 857 227 373 0 26 chrX 35781859 35781936 -130868360 - ID4_ SINE ID -6 77 3 5 857 487 268 42 7 chrX 35781942 35782085 -130868211 - B1F SINE Alu -1 148 1 5 857 284 319 41 14 chrX 35782105 35782251 -130868045 - MIR SINE MIR -105 157 8 5 858 236 343 0 0 chrX 35782890 35782957 -130867339 + ID4_ SINE ID 1 67 -16 5 858 209 267 0 0 chrX 35782961 35783006 -130867290 + GA-rich Low_complexity Low_complexity 1 45 0 5 858 541 252 147 13 chrX 35783157 35783382 -130866914 - MER2 DNA MER2_type -5 340 86 5 858 719 170 228 12 chrX 35783575 35783742 -130866554 + B3 SINE B2 2 204 -12 5 858 257 200 0 0 chrX 35785110 35785155 -130865141 + (TTGGGG)n Simple_repeat Simple_repeat 6 50 0 5 858 1199 42 0 0 chrX 35785660 35785804 -130864492 + B1_Mus1 SINE Alu 5 148 0 5 858 198 0 0 0 chrX 35785804 35785826 -130864470 + (A)n Simple_repeat Simple_repeat 1 22 0 5 858 569 88 0 0 chrX 35785838 35785918 -130864378 + B2_Mm2 SINE B2 1 80 -115 5 858 21 0 0 31 chrX 35785968 35785984 -130864312 + AT_rich Low_complexity Low_complexity 1 16 0 5 858 1352 90 11 0 chrX 35785984 35786172 -130864124 + B2_Mm1t SINE B2 2 191 -2 5 858 21 0 0 31 chrX 35786172 35786187 -130864109 + AT_rich Low_complexity Low_complexity 1 15 0 5 858 207 226 0 0 chrX 35786385 35786393 -130863903 + (CA)n Simple_repeat Simple_repeat 1 8 0 5 858 471 35 0 0 chrX 35786393 35786450 -130863846 + (TCCC)n Simple_repeat Simple_repeat 1 57 0 5 858 207 226 0 0 chrX 35786450 35786494 -130863802 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 858 373 188 65 56 chrX 35786574 35786681 -130863615 + MT2B LTR ERVL 157 264 -337 5 858 682 112 69 0 chrX 35786589 35786705 -130863591 + B1_Mur4 SINE Alu 16 139 -11 5 858 642 26 0 0 chrX 35786706 35786782 -130863514 + (GAAA)n Simple_repeat Simple_repeat 2 77 0 5 858 1284 75 0 0 chrX 35786785 35786958 -130863338 + (GGAA)n Simple_repeat Simple_repeat 1 173 0 5 858 2161 57 0 11 chrX 35786986 35787254 -130863042 + L1Md_F2 LINE L1 5322 5586 -297 5 858 8289 45 2 0 chrX 35787254 35788282 -130862014 + L1Md_F2 LINE L1 5587 6582 0 5 858 745 137 22 30 chrX 35788387 35788522 -130861774 + B1_Mur4 SINE Alu 2 135 -15 5 858 351 0 0 0 chrX 35788524 35788563 -130861733 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 5 858 360 305 76 0 chrX 35788987 35789092 -130861204 - RSINE1 SINE B4 -39 126 14 5 858 217 312 14 79 chrX 35789638 35789777 -130860519 + ID_B1 SINE B4 74 203 -21 5 858 685 161 13 95 chrX 35789855 35790013 -130860283 + B1_Mur4 SINE Alu 6 150 0 5 858 776 154 34 34 chrX 35790397 35790545 -130859751 + B1_Mur2 SINE Alu 1 148 -1 5 858 665 209 54 0 chrX 35790781 35790910 -130859386 + B1_Mur1 SINE Alu 14 149 0 5 858 836 170 14 0 chrX 35791055 35791202 -130859094 + B1_Mur4 SINE Alu 1 149 -1 5 858 465 19 0 0 chrX 35791202 35791256 -130859040 + (CAAAG)n Simple_repeat Simple_repeat 1 54 0 5 858 207 0 0 0 chrX 35792628 35792651 -130857645 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 5 858 810 250 0 57 chrX 35793988 35794217 -130856079 + B3 SINE B2 1 216 0 5 858 933 70 12 0 chrX 35794495 35794636 -130855660 + B2_Mm2 SINE B2 1 156 -42 5 858 22 0 0 0 chrX 35794636 35794658 -130855638 + AT_rich Low_complexity Low_complexity 1 22 0 5 858 533 188 30 0 chrX 35794689 35794790 -130855506 + PB1D10 SINE Alu 1 104 -13 5 858 261 236 0 0 chrX 35794869 35794924 -130855372 + ID4_ SINE ID 20 74 -9 5 858 786 244 70 0 chrX 35794970 35795171 -130855125 + B3 SINE B2 2 216 0 5 858 261 188 116 0 chrX 35795609 35795678 -130854618 - ID SINE ID -139 85 9 5 858 1150 75 0 0 chrX 35796178 35796325 -130853971 + B1_Mus1 SINE Alu 2 148 0 5 858 180 0 0 0 chrX 35796325 35796345 -130853951 + (A)n Simple_repeat Simple_repeat 1 20 0 5 858 417 306 87 0 chrX 35796951 35797135 -130853161 - L1M2 LINE L1 -2324 3819 3589 5 858 293 335 71 51 chrX 35797094 35797430 -130852866 + L1MA6 LINE L1 5952 6294 -6 5 858 1020 215 33 9 chrX 35797553 35797764 -130852532 + B3 SINE B2 1 216 0 5 858 1105 183 9 5 chrX 35797809 35798023 -130852273 + B3 SINE B2 2 216 0 5 858 518 138 11 0 chrX 35798073 35798160 -130852136 + B1_Mur3 SINE Alu 49 136 -13 5 858 915 36 0 0 chrX 35798162 35798273 -130852023 + (GAGAA)n Simple_repeat Simple_repeat 2 112 0 5 858 1157 75 0 0 chrX 35798288 35798434 -130851862 + B1_Mus2 SINE Alu 1 146 -1 5 858 206 180 0 16 chrX 35798443 35798505 -130851791 + GA-rich Low_complexity Low_complexity 2 62 0 5 858 417 269 101 29 chrX 35799789 35799927 -130850369 - MER2 DNA MER2_type -31 314 167 5 858 231 269 104 0 chrX 35800146 35800213 -130850083 - L1M5 LINE L1 -237 5925 5852 5 858 264 117 250 0 chrX 35800537 35800597 -130849699 - PB1D9 SINE Alu -5 115 41 5 858 258 218 59 139 chrX 35800626 35800727 -130849569 - PB1D10 SINE Alu -20 97 5 5 858 241 250 14 14 chrX 35800730 35800803 -130849493 + MLT1N2 LTR MaLR 475 547 -15 5 858 511 211 0 0 chrX 35800807 35800897 -130849399 + PB1D10 SINE Alu 1 90 -27 5 858 305 261 68 31 chrX 35801119 35801248 -130849048 + L1_Mur3 LINE L1 5281 5430 -867 5 858 401 162 176 29 chrX 35802202 35802304 -130847992 + B1_Mus1 SINE Alu 16 132 -16 5 858 697 208 124 5 chrX 35802348 35802541 -130847755 + B3 SINE B2 1 216 0 5 858 185 152 0 0 chrX 35802657 35802690 -130847606 + MIR SINE MIR 72 104 -158 5 858 247 180 0 0 chrX 35802910 35802960 -130847336 + (TTTG)n Simple_repeat Simple_repeat 4 53 0 5 858 1013 210 5 10 chrX 35802983 35803185 -130847111 + B3 SINE B2 5 205 -11 5 858 426 259 68 87 chrX 35803204 35803365 -130846931 + RSINE1 SINE B4 2 159 -6 5 858 336 288 73 41 chrX 35803375 35803498 -130846798 + ID_B1 SINE B4 72 198 -26 5 858 521 246 0 18 chrX 35803396 35803508 -130846788 + B1F SINE Alu 21 130 -19 5 858 354 288 88 0 chrX 35804373 35804498 -130845798 + B1_Mur2 SINE Alu 2 137 -12 5 858 230 327 84 0 chrX 35805042 35805149 -130845147 + L2a LINE L2 3290 3405 -21 5 858 960 93 8 0 chrX 35805226 35805355 -130844941 + B1_Mus1 SINE Alu 1 130 -18 5 858 633 219 20 33 chrX 35805364 35805515 -130844781 + B1_Mur3 SINE Alu 1 149 0 5 858 530 150 230 0 chrX 35805725 35805838 -130844458 + B1_Mus2 SINE Alu 9 147 0 5 858 31 0 0 0 chrX 35805842 35805873 -130844423 + AT_rich Low_complexity Low_complexity 1 31 0 5 858 269 286 0 14 chrX 35805959 35806030 -130844266 - ID SINE ID -152 72 3 5 858 885 153 0 20 chrX 35806053 35806200 -130844096 - B1_Mus1 SINE Alu 0 148 5 5 858 1163 62 0 7 chrX 35806395 35806542 -130843754 + B1_Mm SINE Alu 2 147 0 5 858 749 201 109 35 chrX 35806661 35806862 -130843434 + B3 SINE B2 1 216 0 5 858 287 281 0 12 chrX 35807429 35807512 -130842784 - Charlie1 DNA MER1_type -51 2730 2649 5 858 241 361 37 49 chrX 35807534 35807697 -130842599 - Charlie1 DNA MER1_type -2600 181 21 5 858 356 248 27 9 chrX 35807705 35807815 -130842481 - MER20 DNA MER1_type -7 212 101 5 858 405 250 59 0 chrX 35807848 35808000 -130842296 + Lx9 LINE L1 7484 7644 0 5 858 219 107 52 26 chrX 35808567 35808644 -130841652 + A-rich Low_complexity Low_complexity 2 80 0 5 858 31 68 0 0 chrX 35809247 35809306 -130840990 + GC_rich Low_complexity Low_complexity 1 59 0 5 858 22 56 0 0 chrX 35809924 35809960 -130840336 + AT_rich Low_complexity Low_complexity 1 36 0 5 858 327 25 0 0 chrX 35810421 35810461 -130839835 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 858 247 212 15 29 chrX 35810624 35810692 -130839604 - PB1D10 SINE Alu -29 88 22 5 858 419 243 28 151 chrX 35810758 35810937 -130839359 + B4 SINE B4 67 223 -69 5 858 931 99 0 41 chrX 35810791 35810938 -130839358 + B1_Mur3 SINE Alu 8 148 -1 5 858 712 167 65 0 chrX 35811192 35811330 -130838966 - B1_Mur1 SINE Alu -2 147 1 5 858 574 179 0 82 chrX 35811518 35811652 -130838644 + B1_Mur1 SINE Alu 5 127 -22 5 858 385 75 0 0 chrX 35811648 35811701 -130838595 + B1_Mm SINE Alu 64 116 -31 5 858 28 0 0 0 chrX 35811790 35811818 -130838478 + AT_rich Low_complexity Low_complexity 1 28 0 5 858 344 286 0 0 chrX 35811824 35811901 -130838395 + PB1D10 SINE Alu 2 78 -39 5 858 275 354 0 49 chrX 35812023 35812145 -130838151 - PB1 SINE Alu -8 119 4 5 858 226 285 126 30 chrX 35812384 35812583 -130837713 - MLT2C1 LTR ERVL -177 220 3 5 858 693 78 287 0 chrX 35812815 35812930 -130837366 - B1_Mur4 SINE Alu -2 148 1 6 858 247 350 28 21 chrX 35812935 35813078 -130837218 - B1F1 SINE Alu 0 149 6 6 858 1047 132 185 0 chrX 35813101 35813290 -130837006 - URR1B DNA MER1_type 0 225 2 6 858 662 189 27 27 chrX 35813330 35813477 -130836819 + B1_Mur1 SINE Alu 1 147 -2 6 858 214 29 28 28 chrX 35813982 35814018 -130836278 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 6 858 765 167 15 15 chrX 35814018 35814152 -130836144 - B1_Mus1 SINE Alu -10 138 5 6 858 585 247 20 27 chrX 35814471 35814621 -130835675 - B1_Mur1 SINE Alu 0 149 1 6 858 234 0 0 0 chrX 35814857 35814883 -130835413 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 858 658 256 38 13 chrX 35814910 35815068 -130835228 - B3A SINE B2 -36 162 1 6 858 484 243 81 0 chrX 35815191 35815302 -130834994 - PB1D7 SINE Alu 0 120 1 6 858 24 0 0 0 chrX 35816104 35816128 -130834168 + AT_rich Low_complexity Low_complexity 1 24 0 6 858 943 122 0 33 chrX 35816135 35816287 -130834009 + B1_Mur4 SINE Alu 1 147 -3 6 858 537 192 182 8 chrX 35816508 35816634 -130833662 + B1_Mus1 SINE Alu 1 148 0 6 858 333 0 0 0 chrX 35816636 35816673 -130833623 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 6 858 242 290 29 0 chrX 35816970 35817039 -130833257 + CT-rich Low_complexity Low_complexity 4 74 0 6 858 432 0 0 0 chrX 35817090 35817138 -130833158 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 858 284 202 0 152 chrX 35817369 35817468 -130832828 + B1F SINE Alu 11 94 -55 6 858 21 0 0 0 chrX 35817469 35817490 -130832806 + AT_rich Low_complexity Low_complexity 1 21 0 6 858 655 189 0 0 chrX 35817629 35817756 -130832540 + B1_Mus2 SINE Alu 21 147 0 6 858 527 25 0 47 chrX 35817761 35817846 -130832450 + (GGA)n Simple_repeat Simple_repeat 2 82 0 6 858 333 289 75 11 chrX 35817944 35818080 -130832216 - B1F SINE Alu -2 147 2 6 858 634 248 7 7 chrX 35818346 35818488 -130831808 + B1_Mur1 SINE Alu 3 144 -5 6 858 688 63 56 12 chrX 35818488 35818648 -130831648 + (GA)n Simple_repeat Simple_repeat 1 167 0 6 858 1272 89 0 0 chrX 35818662 35818842 -130831454 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 6 858 611 81 10 0 chrX 35818843 35818942 -130831354 + (CAA)n Simple_repeat Simple_repeat 2 101 0 6 858 505 157 157 0 chrX 35818950 35819058 -130831238 + B3 SINE B2 1 125 -91 6 858 451 236 94 89 chrX 35819220 35819411 -130830885 + B3A SINE B2 2 193 -5 6 858 1059 101 7 7 chrX 35819594 35819744 -130830552 + B1_Mur4 SINE Alu 1 150 0 6 858 227 274 16 31 chrX 35820082 35820146 -130830150 + ID4_ SINE ID 2 64 -19 6 858 554 211 47 146 chrX 35820195 35820428 -130829868 - B3 SINE B2 -6 210 1 6 858 276 243 14 14 chrX 35820476 35820547 -130829749 + ID4 SINE ID 3 73 -10 6 858 620 211 149 6 chrX 35820584 35820765 -130829531 + B3 SINE B2 2 208 -8 6 858 840 174 0 14 chrX 35820805 35820945 -130829351 + B1_Mur4 SINE Alu 7 144 -6 6 858 311 269 38 108 chrX 35820808 35820966 -130829330 + B4A SINE B4 94 240 -52 6 858 1232 100 39 11 chrX 35821070 35821252 -130829044 + B2_Mm2 SINE B2 1 187 -8 6 858 400 209 139 0 chrX 35821337 35821423 -130828873 - PB1D10 SINE Alu 0 117 20 6 858 293 305 15 38 chrX 35821433 35821566 -130828730 + MLT1D LTR MaLR 113 242 -263 6 858 307 317 6 56 chrX 35821852 35822047 -130828249 + G-rich Low_complexity Low_complexity 1 185 0 6 858 256 335 3 32 chrX 35822086 35822351 -130827945 + GA-rich Low_complexity Low_complexity 1 257 0 6 858 414 297 5 69 chrX 35822429 35822617 -130827679 + GA-rich Low_complexity Low_complexity 5 180 0 6 858 330 300 0 29 chrX 35822954 35823057 -130827239 - PB1D10 SINE Alu -9 108 9 6 858 1005 218 19 5 chrX 35823175 35823387 -130826909 - B3 SINE B2 0 216 2 6 858 261 0 0 0 chrX 35823432 35823461 -130826835 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 858 243 341 22 22 chrX 35823526 35823661 -130826635 + L2a LINE L2 3292 3426 0 6 858 423 103 0 14 chrX 35824052 35824121 -130826175 - B1_Mur1 SINE Alu -4 145 78 6 858 288 188 48 36 chrX 35824053 35824136 -130826160 - ID_B1 SINE B4 -4 220 137 6 858 216 0 0 0 chrX 35824321 35824345 -130825951 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 858 267 207 268 0 chrX 35824752 35824834 -130825462 + B3A SINE B2 1 104 -94 6 858 560 131 167 32 chrX 35824837 35824942 -130825354 + B1_Mur2 SINE Alu 5 128 -21 6 858 471 18 0 0 chrX 35824942 35824998 -130825298 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 858 560 131 167 32 chrX 35824998 35825018 -130825278 + B1_Mur2 SINE Alu 129 147 -2 6 858 2122 132 32 16 chrX 35825025 35825395 -130824901 + RMER10B LTR ERVL 23 398 0 6 858 26 30 0 0 chrX 35825471 35825504 -130824792 + AT_rich Low_complexity Low_complexity 1 33 0 6 858 210 300 88 0 chrX 35825634 35825714 -130824582 - B4A SINE B4 -125 167 81 6 858 270 266 89 20 chrX 35825750 35825896 -130824400 + L1MA8 LINE L1 6062 6217 -74 6 858 541 258 74 42 chrX 35825910 35826100 -130824196 + B3A SINE B2 1 196 -2 6 858 207 0 0 0 chrX 35826355 35826378 -130823918 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 858 895 90 97 0 chrX 35826378 35826504 -130823792 - B1_Mus2 SINE Alu -7 140 2 6 858 23 0 0 0 chrX 35826635 35826658 -130823638 + AT_rich Low_complexity Low_complexity 1 23 0 6 858 666 80 14 3 chrX 35827804 35827914 -130822382 + B1_Mm SINE Alu 1 117 0 6 858 1370 89 11 0 chrX 35827925 35828115 -130822181 + B2_Mm1t SINE B2 2 193 0 6 858 540 270 196 49 chrX 35828234 35828580 -130821716 + RMER5 LTR ERV1 133 529 -5 6 858 666 46 0 0 chrX 35828567 35828654 -130821642 + B1_Mus2 SINE Alu 56 142 -5 6 858 482 31 0 15 chrX 35828658 35828723 -130821573 + (GAAA)n Simple_repeat Simple_repeat 2 65 0 6 858 278 321 0 12 chrX 35828787 35828872 -130821424 + PB1D10 SINE Alu 3 86 -31 6 858 424 243 164 14 chrX 35828961 35829107 -130821189 + ID_B1 SINE B4 48 215 -9 6 858 272 179 87 29 chrX 35829498 35829567 -130820729 + RLTR25B LTR ERVK 446 518 -510 6 858 2291 108 34 0 chrX 35829514 35829867 -130820429 + MT2B2 LTR ERVL 220 584 0 6 858 11770 135 41 11 chrX 35829867 35830117 -130820179 - MurERV4_19-int LTR ERVK -3488 2292 2048 6 858 5491 32 23 0 chrX 35830117 35830766 -130819530 - L1Md_F2 LINE L1 -2 6580 5917 6 858 11770 136 45 10 chrX 35830766 35832703 -130817593 - MurERV4_19-int LTR ERVK -3733 2047 31 6 858 343 47 47 0 chrX 35834072 35834115 -130816181 - MurERV4_19-int LTR ERVK -5735 45 1 6 858 3553 103 239 5 chrX 35834115 35834712 -130815584 - RMER19A LTR ERVK 0 737 1 6 858 650 227 60 0 chrX 35835254 35835437 -130814859 + ORR1D1 LTR MaLR 1 210 -168 6 858 6905 95 8 57 chrX 35835437 35835682 -130814614 + L1_Mus4 LINE L1 5609 5826 -810 6 858 1255 41 0 0 chrX 35835682 35835829 -130814467 + B1_Mus2 SINE Alu 1 147 0 6 858 6905 95 8 57 chrX 35835829 35836654 -130813642 + L1_Mus4 LINE L1 5827 6626 -10 6 858 214 152 0 33 chrX 35836688 35836749 -130813547 + (TA)n Simple_repeat Simple_repeat 1 59 0 6 858 785 174 91 17 chrX 35836751 35836926 -130813370 + ORR1D1 LTR MaLR 187 374 0 6 858 244 143 0 0 chrX 35837787 35837829 -130812467 - URR1B DNA MER1_type 0 225 184 6 858 2040 86 19 6 chrX 35837833 35838148 -130812148 - ORR1A2 LTR MaLR -8 319 1 6 858 570 125 0 0 chrX 35838148 35838243 -130812053 - URR1B DNA MER1_type -37 188 94 6 858 4406 14 0 0 chrX 35838243 35838725 -130811571 + LTRIS_Mm LTR ERV1 1 482 0 6 858 22883 46 12 16 chrX 35838725 35841880 -130808416 + MuRRS-int LTR ERV1 1 3277 -1413 6 858 11732 55 4 11 chrX 35841912 35843114 -130807182 + MuRRS-int LTR ERV1 3273 4471 -219 6 858 2237 15 114 0 chrX 35843114 35843376 -130806920 + RLTR10B LTR ERVK 1 292 0 6 858 11732 55 4 11 chrX 35843376 35843601 -130806695 + MuRRS-int LTR ERV1 4472 4690 0 6 858 4428 12 0 0 chrX 35843601 35844083 -130806213 + LTRIS_Mm LTR ERV1 1 482 0 6 858 1132 69 7 0 chrX 35844088 35844233 -130806063 + B1_Mus2 SINE Alu 2 147 0 6 858 198 0 0 0 chrX 35844233 35844255 -130806041 + (A)n Simple_repeat Simple_repeat 1 22 0 6 858 392 178 178 0 chrX 35844255 35844345 -130805951 - URR1B DNA MER1_type -120 105 1 6 858 776 197 0 0 chrX 35844484 35844621 -130805675 - B1_Mur1 SINE Alu -8 141 5 6 858 377 228 12 37 chrX 35844978 35845060 -130805236 - ID SINE ID -141 83 4 6 858 338 123 18 0 chrX 35845148 35845205 -130805091 - B1_Mur1 SINE Alu -6 143 86 6 858 762 180 60 7 chrX 35845205 35845356 -130804940 + ORR1D1 LTR MaLR 1 159 -215 6 858 298 88 310 34 chrX 35845356 35845472 -130804824 - B2_Mm2 SINE B2 -1 194 47 6 858 1127 153 11 0 chrX 35845504 35845680 -130804616 - B2_Mm1t SINE B2 -14 179 2 6 858 733 179 60 43 chrX 35845698 35845872 -130804424 + ORR1D1 LTR MaLR 216 419 0 6 858 251 339 15 0 chrX 35845891 35845956 -130804340 - B1F SINE Alu -78 71 6 6 858 23 0 0 0 chrX 35845971 35845994 -130804302 + AT_rich Low_complexity Low_complexity 1 23 0 6 858 314 136 95 36 chrX 35846005 35846089 -130804207 - B1_Mm SINE Alu -19 128 40 6 858 224 59 29 0 chrX 35846089 35846123 -130804173 + (TCTCCC)n Simple_repeat Simple_repeat 5 39 0 6 858 225 226 74 19 chrX 35846123 35846177 -130804119 - B1_Mus2 SINE Alu -89 58 2 6 858 718 192 216 22 chrX 35846202 35846383 -130803913 + B3 SINE B2 1 216 0 6 858 2081 158 18 18 chrX 35846387 35846768 -130803528 + L1_Mur2 LINE L1 552 932 -6154 6 858 473 155 0 23 chrX 35846768 35846854 -130803442 + RMER17B LTR ERVK 1 84 -874 6 858 2704 89 6 1 chrX 35846854 35847493 -130802803 + L1_Mur2 LINE L1 938 1580 -4297 6 858 3588 180 26 20 chrX 35847494 35848147 -130802149 + Lx5 LINE L1 6383 7039 -11 6 858 5434 61 10 14 chrX 35848563 35849194 -130801102 + L1Md_F2 LINE L1 5877 6506 -76 6 858 3145 9 0 3 chrX 35849194 35849541 -130800755 - ORR1A0 LTR MaLR 0 346 1 6 858 5434 61 10 14 chrX 35849541 35849606 -130800690 + L1Md_F2 LINE L1 6507 6570 -12 6 858 6691 125 107 7 chrX 35849608 35850725 -130799571 + Lx4A LINE L1 5829 7056 -2 6 858 1066 44 0 0 chrX 35850840 35850977 -130799319 - B1_Mm SINE Alu 0 147 11 6 858 297 209 0 0 chrX 35851138 35851205 -130799091 + CT-rich Low_complexity Low_complexity 1 67 0 6 858 240 301 110 20 chrX 35851217 35851363 -130798933 - L2c LINE L2 -8 3379 3221 6 858 423 267 40 158 chrX 35851389 35851426 -130798870 + B3A SINE B2 3 39 -159 7 858 6216 52 0 3 chrX 35851426 35852182 -130798114 + L1Md_F2 LINE L1 5828 6581 -1 7 858 423 267 40 158 chrX 35852182 35852216 -130798080 + B3A SINE B2 40 59 -139 7 858 1331 84 5 64 chrX 35852216 35852419 -130797877 + B2_Mm1a SINE B2 1 191 -2 7 858 423 267 40 158 chrX 35852419 35852568 -130797728 + B3A SINE B2 60 198 0 7 858 696 278 52 0 chrX 35852677 35852871 -130797425 - B3 SINE B2 -12 204 1 7 858 1236 126 11 0 chrX 35852894 35853077 -130797219 + B2_Mm1t SINE B2 2 186 -7 7 858 325 326 8 23 chrX 35853362 35853494 -130796802 + BLACKJACK DNA AcHobo 3 132 -2812 7 858 237 217 58 0 chrX 35853496 35853565 -130796731 + BC1_Mm scRNA scRNA 3 75 -77 7 858 222 303 136 9 chrX 35853608 35853718 -130796578 + PB1 SINE Alu 2 125 -2 7 858 1192 55 7 0 chrX 35853729 35853875 -130796421 + B1_Mus1 SINE Alu 2 148 0 7 858 196 53 26 26 chrX 35853876 35853915 -130796381 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 7 858 764 182 14 14 chrX 35853924 35854069 -130796227 - B1_Mur4 SINE Alu -4 146 2 7 858 260 175 30 45 chrX 35854088 35854154 -130796142 + BC1_Mm scRNA scRNA 3 67 -85 7 858 214 282 12 82 chrX 35854154 35854173 -130796123 + ID SINE ID 3 81 -143 7 858 398 268 23 82 chrX 35854276 35854311 -130795985 - B2_Mm2 SINE B2 -4 191 158 7 858 306 0 0 0 chrX 35854311 35854345 -130795951 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 858 523 241 89 1 chrX 35854345 35854480 -130795816 - B3 SINE B2 -41 175 31 7 858 903 230 0 0 chrX 35854480 35854654 -130795642 - B3 SINE B2 -31 185 12 7 858 1319 51 103 0 chrX 35854654 35854829 -130795467 - B2_Mm1a SINE B2 0 193 1 7 858 511 350 38 59 chrX 35854854 35855071 -130795225 + BLACKJACK DNA AcHobo 285 504 -2440 7 858 895 152 249 0 chrX 35855071 35855248 -130795048 + URR1A DNA MER1_type 5 225 -1 7 858 511 350 38 59 chrX 35855248 35855370 -130794926 + BLACKJACK DNA AcHobo 505 617 -2327 7 858 782 128 64 3 chrX 35855435 35855605 -130794691 + B2_Mm2 SINE B2 2 209 -7 7 858 1210 49 0 0 chrX 35855618 35855761 -130794535 - B1_Mus2 SINE Alu -3 144 2 7 858 21 0 0 0 chrX 35855761 35855782 -130794514 + AT_rich Low_complexity Low_complexity 1 21 0 7 858 271 329 171 12 chrX 35855782 35856034 -130794262 + BLACKJACK DNA AcHobo 735 1026 -1918 7 858 233 190 51 0 chrX 35856091 35856155 -130794141 - B1F SINE Alu 0 149 61 7 858 723 160 99 0 chrX 35856197 35856328 -130793968 + B1_Mur4 SINE Alu 6 149 -1 7 858 429 243 9 5 chrX 35856497 35856629 -130793667 + L1MA6 LINE L1 5833 5962 -341 7 858 1598 123 13 66 chrX 35856694 35856998 -130793298 + ORR1A4 LTR MaLR 1 288 -41 7 858 1144 70 0 6 chrX 35856999 35857157 -130793139 + B2_Mm2 SINE B2 1 157 -38 7 858 441 0 0 0 chrX 35857157 35857206 -130793090 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 7 858 1240 41 7 0 chrX 35857227 35857374 -130792922 + B1_Mus1 SINE Alu 1 148 0 7 858 222 37 0 0 chrX 35857376 35857403 -130792893 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 858 257 276 117 8 chrX 35857404 35857532 -130792764 + L1MA6 LINE L1 6141 6282 -18 7 858 361 235 60 3 chrX 35857608 35857725 -130792571 - B1_Mur1 SINE Alu -20 129 9 7 858 235 258 30 0 chrX 35857726 35857792 -130792504 + BLACKJACK DNA AcHobo 1310 1377 -1567 7 858 854 81 204 26 chrX 35857793 35857945 -130792351 + B2_Mm1t SINE B2 1 179 -14 7 858 264 95 0 0 chrX 35857945 35857964 -130792332 + (T)n Simple_repeat Simple_repeat 1 19 0 7 858 1245 48 0 0 chrX 35857964 35858111 -130792185 - B1_Mus2 SINE Alu 0 147 1 7 858 264 95 0 0 chrX 35858111 35858133 -130792163 + (T)n Simple_repeat Simple_repeat 1 22 0 7 858 716 231 7 0 chrX 35859556 35859699 -130790597 + B1_Mur2 SINE Alu 1 144 -5 7 858 303 162 25 12 chrX 35859720 35859801 -130790495 + GA-rich Low_complexity Low_complexity 1 82 0 7 858 302 241 161 0 chrX 35859850 35859937 -130790359 + PB1 SINE Alu 24 124 -3 7 858 1085 108 48 2 chrX 35859987 35860181 -130790115 + B2_Mm2 SINE B2 1 210 -6 7 858 417 179 0 49 chrX 35860188 35860270 -130790026 + L1_Mur3 LINE L1 4749 4826 -1054 7 858 758 196 14 0 chrX 35860278 35860416 -130789880 - B1_Mur4 SINE Alu 0 150 11 7 858 229 274 0 136 chrX 35860323 35860441 -130789855 - MT2B2 LTR ERVL -327 257 156 7 858 2173 161 46 0 chrX 35860445 35860818 -130789478 + L1_Mur3 LINE L1 4834 5223 -657 7 858 2501 235 37 9 chrX 35860824 35861398 -130788898 + Lx7 LINE L1 6819 7408 -288 7 858 234 150 0 0 chrX 35861400 35861440 -130788856 + (TCC)n Simple_repeat Simple_repeat 3 42 0 7 858 639 88 176 0 chrX 35861558 35861660 -130788636 + PB1D9 SINE Alu 1 120 0 7 858 27 29 0 0 chrX 35861679 35861713 -130788583 + AT_rich Low_complexity Low_complexity 1 34 0 7 858 432 0 0 0 chrX 35861787 35861835 -130788461 + (GA)n Simple_repeat Simple_repeat 1 48 0 7 858 1198 137 11 5 chrX 35861871 35862055 -130788241 - B2_Mm2 SINE B2 -9 186 2 7 858 198 0 0 0 chrX 35862139 35862161 -130788135 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 7 858 951 223 9 14 chrX 35862262 35862476 -130787820 + B3 SINE B2 4 216 0 7 858 356 289 122 0 chrX 35862480 35862636 -130787660 + BLACKJACK DNA AcHobo 2250 2424 -520 7 858 252 256 62 37 chrX 35862661 35862742 -130787554 + ID4_ SINE ID 1 83 0 7 858 873 174 0 20 chrX 35862749 35862901 -130787395 + B1_Mur3 SINE Alu 1 149 0 7 858 1155 221 124 24 chrX 35862902 35863282 -130787014 + L1MA4 LINE L1 5598 6015 -285 7 858 326 245 38 29 chrX 35863280 35863385 -130786911 + L1MA4 LINE L1 6192 6297 -3 7 858 936 70 85 0 chrX 35863395 35863524 -130786772 + B1_Mus1 SINE Alu 3 142 -6 7 858 462 18 0 0 chrX 35863526 35863581 -130786715 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 7 858 478 250 19 0 chrX 35863731 35863839 -130786457 - PB1D7 SINE Alu -10 110 1 7 858 451 306 0 9 chrX 35863870 35863982 -130786314 - PB1D7 SINE Alu -9 111 1 7 858 303 309 25 0 chrX 35864003 35864084 -130786212 - RSINE1 SINE B4 0 165 83 7 858 888 169 14 0 chrX 35864095 35864237 -130786059 + B1_Mus2 SINE Alu 3 146 -1 7 858 387 329 92 12 chrX 35864326 35864489 -130785807 - B4A SINE B4 -15 277 102 7 858 8711 102 42 45 chrX 35864529 35865353 -130784943 - Lx3C LINE L1 -1 6975 6123 7 858 1276 34 0 0 chrX 35865353 35865500 -130784796 + B1_Mus1 SINE Alu 2 148 0 7 858 8711 94 16 18 chrX 35865500 35866195 -130784101 - Lx3C LINE L1 -854 6122 5463 7 858 229 254 58 19 chrX 35866391 35866457 -130783839 + PB1D10 SINE Alu 33 102 -47 7 858 212 260 20 0 chrX 35866484 35866534 -130783762 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 858 466 259 11 97 chrX 35866695 35866870 -130783426 + RSINE1 SINE B4 6 165 0 7 858 274 198 184 11 chrX 35867692 35867779 -130782517 + B3 SINE B2 115 216 0 7 858 248 130 22 0 chrX 35867817 35867863 -130782433 + GA-rich Low_complexity Low_complexity 2 48 0 7 858 848 163 15 7 chrX 35868255 35868391 -130781905 + B1_Mur4 SINE Alu 5 141 -9 7 858 788 29 0 19 chrX 35868391 35868495 -130781801 + (GGAA)n Simple_repeat Simple_repeat 3 104 0 7 858 202 312 16 0 chrX 35868894 35868958 -130781338 + L2b LINE L2 3273 3337 -38 7 858 625 197 6 107 chrX 35869049 35869208 -130781088 - B1_Mur1 SINE Alu -5 144 2 7 858 933 50 0 0 chrX 35869267 35869388 -130780908 - B1_Mus1 SINE Alu -2 146 26 7 858 756 228 22 11 chrX 35869583 35869764 -130780532 - B3 SINE B2 -3 213 31 7 858 2410 114 41 36 chrX 35869764 35869860 -130780436 + MTC LTR MaLR 1 94 -327 7 858 1375 40 55 28 chrX 35869860 35870041 -130780255 + B2_Mm2 SINE B2 2 187 -8 7 858 2410 114 41 36 chrX 35870041 35870355 -130779941 + MTC LTR MaLR 95 413 -8 7 858 301 354 66 0 chrX 35870599 35870780 -130779516 - L1M5 LINE L1 -782 5364 5172 7 858 499 312 45 19 chrX 35870918 35871186 -130779110 - L1ME1 LINE L1 -111 6068 5794 7 858 753 303 94 11 chrX 35871269 35871536 -130778760 - B4 SINE B4 -2 290 2 7 858 227 182 73 0 chrX 35871537 35871592 -130778704 - L1MD LINE L1 -668 5691 5633 7 858 601 205 8 0 chrX 35871907 35872024 -130778272 - ID_B1 SINE B4 -7 217 100 7 858 449 246 57 43 chrX 35872024 35872047 -130778249 - B1F2 SINE Alu -7 142 1 7 858 378 291 98 47 chrX 35872235 35872509 -130777787 + B4A SINE B4 4 291 -1 7 858 183 80 0 0 chrX 35872510 35872535 -130777761 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 858 458 33 17 0 chrX 35872555 35872615 -130777681 + (TATG)n Simple_repeat Simple_repeat 3 63 0 7 858 25 0 0 0 chrX 35872726 35872751 -130777545 + AT_rich Low_complexity Low_complexity 1 25 0 7 858 233 140 0 0 chrX 35872838 35872888 -130777408 + MT2A LTR ERVL 484 533 0 7 858 289 290 45 45 chrX 35873317 35873429 -130776867 + B1F2 SINE Alu 25 136 -13 7 858 550 246 48 24 chrX 35873451 35873576 -130776720 + ETnERV2-int LTR ERVK 7070 7197 -209 7 858 842 145 15 0 chrX 35874103 35874234 -130776062 + B1_Mur2 SINE Alu 1 133 -16 7 858 309 318 83 22 chrX 35874417 35874597 -130775699 + MER34B-int LTR ERV1 393 583 -4773 7 858 232 276 105 0 chrX 35874646 35874751 -130775545 - PB1D7 SINE Alu -3 117 2 7 858 1534 62 0 0 chrX 35875213 35875406 -130774890 + B2_Mm1a SINE B2 1 193 0 7 858 21 36 0 0 chrX 35875786 35875814 -130774482 + AT_rich Low_complexity Low_complexity 1 28 0 7 858 273 179 146 56 chrX 35875876 35875965 -130774331 + MER34B-int LTR ERV1 1284 1380 -3556 7 858 1631 21 5 16 chrX 35876330 35876524 -130773772 - B2_Mm1t SINE B2 0 193 2 7 858 502 249 210 18 chrX 35876573 35876802 -130773494 - B4 SINE B4 -18 274 2 7 858 712 84 2 8 chrX 35876909 35877022 -130773274 + B1_Mm SINE Alu 2 108 -12 7 858 259 236 40 27 chrX 35877191 35877265 -130773031 + RMER5 LTR ERV1 432 506 -28 7 858 336 248 229 41 chrX 35877460 35877996 -130772300 + L1MB5 LINE L1 2344 3010 -3372 7 858 559 248 29 22 chrX 35878076 35878212 -130772084 + RSINE1 SINE B4 1 137 -28 7 858 385 271 0 78 chrX 35878315 35878443 -130771853 + B4A SINE B4 87 204 -88 7 858 269 278 163 51 chrX 35878910 35879088 -130771208 + L1MB5 LINE L1 3687 3884 -2492 7 858 363 279 92 8 chrX 35879121 35879251 -130771045 + RSINE1 SINE B4 17 157 -8 7 858 261 280 126 16 chrX 35879277 35879531 -130770765 + L1MB5 LINE L1 3923 4204 -2178 7 858 715 217 53 24 chrX 35879534 35879704 -130770592 + B3 SINE B2 1 175 -41 8 858 667 261 19 0 chrX 35879987 35880148 -130770148 + URR1A DNA MER1_type 63 226 0 8 858 445 286 29 18 chrX 35880341 35880512 -130769784 + L1MB5 LINE L1 4855 5027 -1349 7 858 363 149 322 0 chrX 35880527 35880614 -130769682 + PB1D9 SINE Alu 6 120 0 8 858 631 130 20 0 chrX 35880665 35880765 -130769531 + B1_Mur4 SINE Alu 1 102 -48 8 858 7919 1 0 0 chrX 35880773 35881629 -130768667 - L1Md_A LINE L1 0 6582 5727 8 858 281 157 0 19 chrX 35881629 35881681 -130768615 + B1_Mus2 SINE Alu 86 136 -11 8 858 677 211 88 7 chrX 35881941 35882089 -130768207 + RSINE1 SINE B4 6 165 0 8 858 245 307 119 19 chrX 35882164 35882442 -130767854 + L1MB5 LINE L1 5476 5787 -632 7 858 340 240 146 8 chrX 35882584 35882714 -130767582 + L1MB5 LINE L1 6040 6187 -223 7 858 272 281 149 0 chrX 35882768 35882889 -130767407 + L1MB5 LINE L1 6278 6416 0 7 858 496 176 13 40 chrX 35883165 35883300 -130766996 - PB1D9 SINE Alu -11 139 10 8 858 225 268 59 35 chrX 35883225 35883310 -130766986 - B4A SINE B4 -121 171 85 8 858 1060 123 52 17 chrX 35883364 35883538 -130766758 + B2_Mm2 SINE B2 3 182 -13 8 858 407 92 79 0 chrX 35883577 35883653 -130766643 + Lx LINE L1 6570 6651 -3 8 858 1417 64 42 16 chrX 35883823 35884013 -130766283 + B2_Mm2 SINE B2 1 195 0 8 858 268 294 12 12 chrX 35884135 35884221 -130766075 + PB1D10 SINE Alu 32 117 0 8 858 401 118 7 43 chrX 35887007 35887092 -130763204 + B1_Mus2 SINE Alu 46 119 -1 8 858 293 297 18 18 chrX 35887106 35887219 -130763077 + PB1D10 SINE Alu 1 113 -4 8 858 250 228 0 34 chrX 35887424 35887483 -130762813 + ID4 SINE ID 21 77 -6 8 858 231 159 0 0 chrX 35887994 35888007 -130762289 + A-rich Low_complexity Low_complexity 1 13 0 8 858 1065 88 0 39 chrX 35888007 35888160 -130762136 + B1_Mm SINE Alu 1 147 0 8 858 231 159 0 0 chrX 35888160 35888190 -130762106 + A-rich Low_complexity Low_complexity 14 43 0 8 858 601 158 0 10 chrX 35888348 35888450 -130761846 - B1_Mur4 SINE Alu -9 141 41 8 858 342 45 0 0 chrX 35888468 35888512 -130761784 + (TTTTC)n Simple_repeat Simple_repeat 2 45 0 8 858 1557 37 5 0 chrX 35888536 35888724 -130761572 + B2_Mm1t SINE B2 2 190 -3 8 858 940 82 0 95 chrX 35888724 35888871 -130761425 - B1_Mus2 SINE Alu -13 134 1 8 858 180 0 0 0 chrX 35888995 35889015 -130761281 + (CAAAC)n Simple_repeat Simple_repeat 2 21 0 8 858 356 195 0 22 chrX 35889320 35889409 -130760887 + Lx2B LINE L1 6912 6998 -2 8 858 1287 73 67 6 chrX 35889879 35890059 -130760237 + B2_Mm2 SINE B2 2 192 -3 8 858 544 252 51 15 chrX 35890740 35890877 -130759419 + B4 SINE B4 130 271 -21 8 858 504 238 256 0 chrX 35890944 35891116 -130759180 - B3 SINE B2 0 216 1 8 858 405 357 21 52 chrX 35891234 35891426 -130758870 - B4 SINE B4 -4 288 103 8 858 293 255 199 0 chrX 35891451 35891592 -130758704 + L1MA4 LINE L1 5725 5893 -407 8 858 280 257 40 0 chrX 35891974 35892048 -130758248 + B3 SINE B2 125 201 -15 8 858 787 291 14 5 chrX 35892836 35893050 -130757246 + B3 SINE B2 1 216 0 8 858 498 230 94 16 chrX 35893618 35893746 -130756550 - ID_B1 SINE B4 -7 217 80 8 858 583 255 27 14 chrX 35894333 35894480 -130755816 - RSINE1 SINE B4 -15 150 2 8 858 4108 92 48 2 chrX 35896720 35897322 -130752974 + L1_Mus1 LINE L1 5938 6567 0 8 858 487 269 128 62 chrX 35897515 35897788 -130752508 - B4 SINE B4 0 292 2 8 858 440 214 181 8 chrX 35898492 35898619 -130751677 - B1F1 SINE Alu 0 149 1 8 858 318 281 0 37 chrX 35899024 35899131 -130751165 + BC1_Mm scRNA scRNA 2 104 -48 8 858 26 30 0 0 chrX 35899296 35899329 -130750967 + AT_rich Low_complexity Low_complexity 1 33 0 8 858 1263 27 0 7 chrX 35900329 35900477 -130749819 + B1_Mus1 SINE Alu 2 148 0 8 858 234 156 22 0 chrX 35900544 35900589 -130749707 - U2 snRNA snRNA -131 57 12 8 858 1343 57 17 0 chrX 35900734 35900909 -130749387 - B2_Mm1t SINE B2 -14 179 2 8 858 180 0 0 0 chrX 35901344 35901364 -130748932 + (CAG)n Simple_repeat Simple_repeat 1 20 0 8 858 807 246 14 67 chrX 35901364 35901573 -130748723 - B3 SINE B2 -17 199 2 8 858 445 239 36 9 chrX 35902033 35902143 -130748153 + PB1D10 SINE Alu 1 113 -4 8 858 239 254 7 73 chrX 35903517 35903653 -130746643 + CT-rich Low_complexity Low_complexity 1 127 0 8 858 553 241 8 33 chrX 35904473 35904593 -130745703 + PB1D10 SINE Alu 1 117 0 8 858 763 202 0 117 chrX 35905336 35905532 -130744764 + B2_Mm2 SINE B2 1 173 -22 8 858 180 0 0 0 chrX 35906331 35906351 -130743945 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 858 1261 78 61 0 chrX 35906712 35906892 -130743404 - B2_Mm2 SINE B2 -4 191 1 8 858 268 303 0 15 chrX 35907517 35907584 -130742712 + ID4_ SINE ID 16 81 -2 8 858 266 309 80 26 chrX 35907584 35907630 -130742666 + ID_B1 SINE B4 16 134 -90 8 858 910 134 28 14 chrX 35907881 35908025 -130742271 - B1_Mur4 SINE Alu 0 150 5 8 858 301 102 20 0 chrX 35908252 35908301 -130741995 + L1_Mur3 LINE L1 5431 5480 -400 8 858 238 234 0 0 chrX 35908314 35908361 -130741935 + B1_Mur2 SINE Alu 43 89 -60 8 858 350 297 0 43 chrX 35908358 35908474 -130741822 + PB1D10 SINE Alu 7 117 0 8 858 1980 161 202 25 chrX 35908644 35909123 -130741173 + RMER15 LTR ERVL 12 575 0 8 858 308 204 370 0 chrX 35909288 35909396 -130740900 + B1F SINE Alu 1 148 -1 8 858 703 292 14 59 chrX 35909413 35909446 -130740850 + B3 SINE B2 2 26 -190 8 858 1162 56 0 0 chrX 35909446 35909588 -130740708 - B1_Mm SINE Alu -5 142 1 8 858 703 292 14 59 chrX 35909588 35909776 -130740520 + B3 SINE B2 27 213 -3 8 858 34 55 0 0 chrX 35909803 35909858 -130740438 + AT_rich Low_complexity Low_complexity 1 55 0 8 858 479 213 104 24 chrX 35910098 35910223 -130740073 + B1_Mur2 SINE Alu 14 148 -1 8 858 461 235 0 48 chrX 35910252 35910355 -130739941 + B1_Mur4 SINE Alu 53 150 0 8 858 1065 85 101 17 chrX 35910497 35910656 -130739640 + B2_Mm2 SINE B2 1 177 -18 8 858 3248 41 13 3 chrX 35910656 35911048 -130739248 - MTA_Mm LTR MaLR 0 396 1 8 858 1065 85 101 17 chrX 35911048 35911067 -130739229 + B2_Mm2 SINE B2 178 194 -1 8 858 470 205 0 33 chrX 35911143 35911234 -130739062 - PB1D10 SINE Alu -9 108 21 8 858 311 340 58 53 chrX 35912211 35912350 -130737946 - MIRc SINE MIR -51 217 79 8 858 1284 109 0 10 chrX 35912350 35912544 -130737752 + B2_Mm2 SINE B2 1 192 -3 8 858 311 340 58 53 chrX 35912544 35912612 -130737684 - MIRc SINE MIR -190 78 9 8 858 1190 54 0 0 chrX 35912613 35912760 -130737536 - B1_Mus1 SINE Alu 0 148 2 8 858 1072 87 0 7 chrX 35913247 35913386 -130736910 + B1_Mus2 SINE Alu 1 138 -9 8 858 1484 58 0 5 chrX 35913392 35913582 -130736714 + B2_Mm2 SINE B2 3 191 -4 8 107 544 167 200 0 chrX 35913631 35913751 -130736545 + B1_Mus1 SINE Alu 5 148 0 8 859 580 285 14 55 chrX 35913764 35913909 -130736387 + RSINE1 SINE B4 1 139 -26 8 859 279 0 0 0 chrX 35913912 35913943 -130736353 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 859 827 200 55 0 chrX 35914010 35914155 -130736141 + RSINE1 SINE B4 11 163 -2 8 859 469 279 33 73 chrX 35914519 35914643 -130735653 + B3A SINE B2 48 170 -28 8 859 300 27 0 0 chrX 35914643 35914680 -130735616 + (CA)n Simple_repeat Simple_repeat 1 37 0 8 859 469 279 33 73 chrX 35914680 35914706 -130735590 + B3A SINE B2 171 192 -6 8 859 474 335 65 20 chrX 35915233 35915434 -130734862 - MIRb SINE MIR -18 250 41 8 859 235 247 12 61 chrX 35917481 35917563 -130732733 + G-rich Low_complexity Low_complexity 5 82 0 8 859 382 312 0 30 chrX 35919568 35919667 -130730629 + PB1D10 SINE Alu 7 102 -15 8 859 312 278 224 9 chrX 35919868 35919984 -130730312 + B4 SINE B4 83 223 -69 8 859 560 184 48 0 chrX 35919883 35919986 -130730310 + PB1D7 SINE Alu 13 120 0 8 859 335 250 99 12 chrX 35920751 35920832 -130729464 + B1_Mur2 SINE Alu 14 101 -48 8 859 1613 31 0 10 chrX 35920843 35921038 -130729258 - B2_Mm1t SINE B2 0 193 1 8 859 1011 69 0 0 chrX 35921210 35921340 -130728956 - B1_Mm SINE Alu 0 147 18 8 859 1464 59 11 0 chrX 35921341 35921527 -130728769 - B2_Mm1t SINE B2 -4 189 2 8 859 552 222 162 17 chrX 35921549 35921728 -130728568 - B3 SINE B2 -11 205 1 8 859 681 193 0 0 chrX 35921789 35921929 -130728367 + (TA)n Simple_repeat Simple_repeat 1 140 0 8 859 481 252 8 25 chrX 35921946 35922064 -130728232 - PB1D7 SINE Alu -4 116 1 8 859 444 326 7 35 chrX 35922632 35922775 -130727521 + ID_B1 SINE B4 82 220 -4 8 859 1432 64 27 0 chrX 35922782 35922969 -130727327 + B2_Mm1t SINE B2 1 192 -1 8 859 765 179 14 41 chrX 35922998 35923144 -130727152 + B1_Mur3 SINE Alu 1 142 -7 8 859 206 121 0 0 chrX 35923597 35923630 -130726666 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 8 859 341 276 0 62 chrX 35923639 35923720 -130726576 + ID_B1 SINE B4 21 96 -128 8 859 225 0 0 0 chrX 35923754 35923779 -130726517 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 859 287 85 21 0 chrX 35924165 35924212 -130726084 + (GA)n Simple_repeat Simple_repeat 1 48 0 8 859 770 256 22 11 chrX 35924671 35924853 -130725443 + MER58A DNA MER1_type 9 192 -32 8 859 224 290 67 75 chrX 35925005 35925046 -130725250 + ID_B1 SINE B4 92 224 0 8 859 349 242 43 21 chrX 35925046 35925139 -130725157 + PB1D7 SINE Alu 25 119 -1 8 859 1313 93 11 0 chrX 35925809 35925991 -130724305 - B2_Mm1t SINE B2 -9 184 1 8 859 402 270 22 53 chrX 35926255 35926493 -130723803 + GA-rich Low_complexity Low_complexity 1 230 0 8 859 499 309 6 39 chrX 35926517 35926758 -130723538 + GA-rich Low_complexity Low_complexity 1 232 0 8 859 264 256 9 9 chrX 35926948 35927064 -130723232 - Lx9 LINE L1 -1701 5943 5791 9 859 395 223 54 133 chrX 35927223 35927502 -130722794 + L1M3 LINE L1 4283 4539 -1601 9 859 1475 49 33 0 chrX 35927503 35927686 -130722610 + B2_Mm1t SINE B2 2 190 -3 9 859 1183 36 0 0 chrX 35927733 35927871 -130722425 + B1_Mus2 SINE Alu 1 138 -9 9 859 279 302 22 39 chrX 35927892 35928071 -130722225 + GA-rich Low_complexity Low_complexity 3 178 0 9 859 339 330 0 38 chrX 35928164 35928350 -130721946 + GA-rich Low_complexity Low_complexity 1 179 0 9 859 202 137 38 38 chrX 35928375 35928428 -130721868 + G-rich Low_complexity Low_complexity 3 55 0 9 859 223 291 7 78 chrX 35928507 35928660 -130721636 + G-rich Low_complexity Low_complexity 1 142 0 9 859 439 251 135 48 chrX 35928690 35928937 -130721359 - B4 SINE B4 -20 272 2 9 859 234 0 0 0 chrX 35929664 35929690 -130720606 + (CAAAC)n Simple_repeat Simple_repeat 2 27 0 9 859 270 289 0 35 chrX 35929831 35929917 -130720379 - L1MDa LINE L1 -5817 816 734 9 859 341 41 0 0 chrX 35930196 35930245 -130720051 + B1_Mus2 SINE Alu 99 147 0 9 859 396 155 0 0 chrX 35930245 35930316 -130719980 + A-rich Low_complexity Low_complexity 1 71 0 9 859 281 197 58 117 chrX 35930531 35930645 -130719651 + PB1D10 SINE Alu 10 149 0 9 859 339 164 16 0 chrX 35930795 35930856 -130719440 + B1_Mus2 SINE Alu 85 146 -1 9 859 264 91 0 0 chrX 35930857 35930901 -130719395 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 9 859 218 344 61 30 chrX 35931093 35931192 -130719104 + B1F SINE Alu 8 109 -40 9 859 248 104 12 72 chrX 35931337 35931420 -130718876 + T-rich Low_complexity Low_complexity 1 78 0 9 859 782 133 0 40 chrX 35931420 35931545 -130718751 - B1_Mur4 SINE Alu 0 150 31 9 859 254 288 0 52 chrX 35931731 35931808 -130718488 + Lx8 LINE L1 7151 7223 -250 9 859 276 390 0 0 chrX 35931812 35931907 -130718389 + RMER15 LTR ERVL 371 465 -110 9 859 809 185 13 40 chrX 35931929 35932081 -130718215 + B1_Mur2 SINE Alu 2 149 0 9 859 22 0 0 0 chrX 35932257 35932279 -130718017 + AT_rich Low_complexity Low_complexity 1 22 0 9 859 797 146 39 26 chrX 35932352 35932507 -130717789 - MTD LTR MaLR -1 418 262 9 859 720 92 28 0 chrX 35932484 35932593 -130717703 + B1_Mus2 SINE Alu 36 147 0 9 859 1138 254 59 53 chrX 35932584 35932921 -130717375 - ORR1D2 LTR MaLR -29 341 3 9 859 228 188 30 141 chrX 35933010 35933024 -130717272 + MT2B2 LTR ERVL 153 155 -429 9 859 466 303 0 21 chrX 35933024 35933122 -130717174 + B1F1 SINE Alu 1 98 -51 9 859 201 147 0 0 chrX 35933122 35933156 -130717140 + (CATG)n Simple_repeat Simple_repeat 2 35 0 9 859 391 232 77 48 chrX 35933161 35933265 -130717031 + PB1D9 SINE Alu 1 107 -13 9 859 466 303 0 21 chrX 35933265 35933305 -130716991 + B1F1 SINE Alu 104 141 -8 9 859 410 298 71 77 chrX 35933305 35933340 -130716956 + B4A SINE B4 178 264 -28 9 859 1515 194 138 30 chrX 35933342 35933713 -130716583 - MTD LTR MaLR -8 411 1 9 859 205 260 0 20 chrX 35933727 35933778 -130716518 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 859 891 221 30 34 chrX 35933849 35934083 -130716213 + Lx8 LINE L1 6590 6822 -651 9 859 402 344 4 109 chrX 35934122 35934370 -130715926 + HAL1 LINE L1 1381 1602 -905 9 859 396 207 0 0 chrX 35934386 35934468 -130715828 + HAL1 LINE L1 1685 1766 -741 9 859 639 248 15 0 chrX 35934565 35934702 -130715594 + B1_Mur2 SINE Alu 1 139 -10 9 859 599 213 40 16 chrX 35934804 35934928 -130715368 + B1_Mur2 SINE Alu 21 147 -2 9 859 682 301 44 18 chrX 35935041 35935315 -130714981 + Lx8 LINE L1 6925 7205 -268 9 859 285 351 5 119 chrX 35935316 35935510 -130714786 + RMER15 LTR ERVL 300 471 -104 9 859 667 311 64 46 chrX 35935869 35936152 -130714144 + B4 SINE B4 1 288 -4 9 859 251 271 0 0 chrX 35936176 35936224 -130714072 - B4A SINE B4 -8 284 237 9 859 1133 76 0 0 chrX 35936238 35936383 -130713913 + B1_Mus2 SINE Alu 2 146 -1 9 859 257 276 13 13 chrX 35936495 35936572 -130713724 + MLT1A1 LTR MaLR 332 408 0 9 859 198 162 27 0 chrX 35936590 35936627 -130713669 - MER5A DNA MER1_type -151 38 1 9 859 338 299 79 55 chrX 35936721 35936923 -130713373 - MER3 DNA MER1_type -1 208 2 9 859 595 252 16 0 chrX 35936926 35937049 -130713247 - L2 LINE L2 -2030 1389 1265 9 859 332 335 94 54 chrX 35937087 35937384 -130712912 - MLT1A LTR MaLR -3 371 63 9 859 671 330 117 20 chrX 35937396 35937748 -130712548 - L2 LINE L2 -2810 609 224 9 859 221 57 0 28 chrX 35937749 35937785 -130712511 + (TTTTG)n Simple_repeat Simple_repeat 4 38 0 9 859 1141 57 0 0 chrX 35937798 35937939 -130712357 - B1_Mus1 SINE Alu -6 142 2 9 859 187 279 58 14 chrX 35938150 35938219 -130712077 - L2 LINE L2 -3201 218 147 9 859 395 240 63 79 chrX 35938367 35938557 -130711739 - Lx8 LINE L1 0 7473 7287 9 859 347 194 0 0 chrX 35938557 35938624 -130711672 + Lx8 LINE L1 6791 6857 -616 9 859 484 277 13 45 chrX 35938742 35938897 -130711399 + Lx8 LINE L1 6895 7044 -429 9 859 525 316 38 19 chrX 35939155 35939365 -130710931 + ID_B1 SINE B4 3 216 -8 9 859 290 247 11 0 chrX 35939396 35939489 -130710807 + GA-rich Low_complexity Low_complexity 2 95 0 9 859 532 217 9 0 chrX 35939659 35939765 -130710531 - Lx9 LINE L1 -1148 6496 6390 9 859 453 232 133 67 chrX 35939900 35940140 -130710156 - Lx9 LINE L1 -1592 6052 5797 9 859 2084 201 116 17 chrX 35940150 35940596 -130709700 + Lx9 LINE L1 7048 7487 -157 9 859 252 122 0 0 chrX 35940596 35940637 -130709659 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 859 2084 201 116 17 chrX 35940637 35940726 -130709570 + Lx9 LINE L1 7488 7635 -9 9 859 543 248 9 0 chrX 35940801 35940910 -130709386 - PB1D10 SINE Alu -5 112 3 9 859 362 80 0 0 chrX 35940943 35940993 -130709303 + RLTR45 LTR ERVK 8 57 -425 9 859 372 289 95 34 chrX 35941022 35941201 -130709095 + MIR SINE MIR 44 233 -29 9 859 472 240 47 89 chrX 35941448 35941617 -130708679 + RSINE1 SINE B4 3 164 -1 9 859 21 36 0 0 chrX 35941634 35941662 -130708634 + AT_rich Low_complexity Low_complexity 1 28 0 9 859 983 100 72 24 chrX 35941675 35941878 -130708418 + B1_Mus1 SINE Alu 23 311 0 9 859 457 234 9 27 chrX 35941914 35942024 -130708272 + PB1D9 SINE Alu 12 119 -1 9 859 310 306 81 10 chrX 35942312 35942411 -130707885 - RSINE1 SINE B4 -1 164 59 9 859 258 320 0 0 chrX 35942442 35942517 -130707779 - ID_B1 SINE B4 -1 223 149 9 859 234 306 40 27 chrX 35942742 35942816 -130707480 - B1F1 SINE Alu -68 81 7 9 859 371 304 16 73 chrX 35942758 35942882 -130707414 - ID_B1 SINE B4 -81 143 27 9 859 1262 133 100 267 chrX 35943045 35943506 -130706790 + RLTR18B LTR ERVK 1 384 -128 9 859 1253 67 30 86 chrX 35943542 35943626 -130706670 - B2_Mm2 SINE B2 -9 186 111 9 859 1203 55 0 0 chrX 35943626 35943772 -130706524 - B1_Mus1 SINE Alu -2 146 1 9 859 1253 67 30 86 chrX 35943772 35943884 -130706412 - B2_Mm2 SINE B2 -85 110 1 9 859 189 74 0 0 chrX 35943898 35943925 -130706371 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 859 1031 37 75 0 chrX 35943925 35944054 -130706242 - B1_Mus2 SINE Alu -3 144 6 9 859 758 152 8 31 chrX 35944055 35944184 -130706112 + B1_Mur4 SINE Alu 19 144 -6 9 859 525 207 0 0 chrX 35944187 35944274 -130706022 + RLTR18B LTR ERVK 372 458 -54 9 859 595 127 343 48 chrX 35944282 35944448 -130705848 - B3 SINE B2 -1 215 1 9 859 3150 162 41 21 chrX 35944496 35945125 -130705171 + Lx6 LINE L1 6235 6876 -584 9 859 1059 197 30 0 chrX 35945148 35945351 -130704945 + MTC LTR MaLR 1 209 -212 9 859 1316 65 37 26 chrX 35945417 35945607 -130704689 - B2_Mm2 SINE B2 -2 193 2 9 859 1127 260 200 28 chrX 35945763 35946386 -130703910 + Lx8 LINE L1 6715 7444 -29 9 859 1302 92 0 0 chrX 35947321 35947495 -130702801 + B2_Mm2 SINE B2 1 174 -21 9 859 329 299 81 0 chrX 35947547 35947634 -130702662 - PB1D10 SINE Alu -22 95 2 9 859 339 289 77 0 chrX 35947660 35947764 -130702532 - PB1D7 SINE Alu 0 120 9 9 859 932 101 7 28 chrX 35947775 35947918 -130702378 - B1_Mus1 SINE Alu -6 142 3 9 859 565 268 38 19 chrX 35948010 35948170 -130702126 + RSINE1 SINE B4 3 165 0 9 859 471 164 8 15 chrX 35948361 35948491 -130701805 + GA-rich Low_complexity Low_complexity 2 130 0 9 859 282 295 186 9 chrX 35948530 35948643 -130701653 + B1F SINE Alu 7 139 -10 9 859 306 0 0 0 chrX 35948643 35948677 -130701619 + (CAA)n Simple_repeat Simple_repeat 2 35 0 9 859 312 219 48 48 chrX 35948729 35948849 -130701447 + PB1D10 SINE Alu 3 117 0 9 859 344 250 0 14 chrX 35948868 35948937 -130701359 + ID4_ SINE ID 7 74 -9 9 859 29 78 0 0 chrX 35949095 35949159 -130701137 + AT_rich Low_complexity Low_complexity 1 64 0 9 859 536 236 16 39 chrX 35949159 35949287 -130701009 - B3 SINE B2 -7 209 85 9 859 235 306 0 0 chrX 35949394 35949456 -130700840 + CT-rich Low_complexity Low_complexity 1 62 0 9 859 180 111 0 0 chrX 35949871 35949898 -130700398 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 859 22 88 0 0 chrX 35949951 35950008 -130700288 + AT_rich Low_complexity Low_complexity 1 57 0 9 859 279 0 0 0 chrX 35950058 35950089 -130700207 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 9 859 1225 94 0 0 chrX 35950089 35950249 -130700047 - B2_Mm1a SINE B2 -33 160 1 9 859 549 194 0 10 chrX 35950481 35950580 -130699716 - B3 SINE B2 -118 98 1 9 859 864 188 14 0 chrX 35950615 35950759 -130699537 - B1_Mus2 SINE Alu -1 146 1 9 859 552 312 102 37 chrX 35950855 35951071 -130699225 + MER47B DNA MER2_type 43 272 -146 9 859 206 62 0 30 chrX 35951108 35951141 -130699155 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 9 859 462 35 0 0 chrX 35951141 35951198 -130699098 - B1_Mur4 SINE Alu -10 140 84 9 859 1220 81 12 0 chrX 35951198 35951370 -130698926 - B2_Mm2 SINE B2 -21 174 1 9 859 305 231 25 37 chrX 35951373 35951454 -130698842 + MER47B DNA MER2_type 339 418 0 9 859 348 369 48 5 chrX 35951697 35951885 -130698411 - MamRep605 Unknown Unknown -109 767 572 9 859 1327 57 29 0 chrX 35952216 35952391 -130697905 + B2_Mm2 SINE B2 2 181 -14 1 859 516 75 346 9 chrX 35952419 35952526 -130697770 + B2_Mm2 SINE B2 47 189 -6 1 859 728 228 20 14 chrX 35952545 35952692 -130697604 + B1_Mur1 SINE Alu 1 148 -1 1 859 533 208 28 70 chrX 35952966 35953132 -130697164 - B1_Mur3 SINE Alu -6 143 1 1 859 351 276 88 6 chrX 35953242 35953413 -130696883 - MER53 DNA hAT -4 189 5 1 859 21 57 0 0 chrX 35954956 35954991 -130695305 + AT_rich Low_complexity Low_complexity 1 35 0 1 859 394 307 9 9 chrX 35955922 35956037 -130694259 + PB1D7 SINE Alu 1 115 -5 1 859 203 0 37 0 chrX 35956079 35956106 -130694190 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 859 1106 43 0 7 chrX 35956106 35956245 -130694051 - B1_Mus1 SINE Alu -10 138 1 1 859 196 337 22 55 chrX 35956245 35956336 -130693960 - L2a LINE L2 -20 3406 3319 1 859 234 0 0 0 chrX 35956768 35956794 -130693502 + (T)n Simple_repeat Simple_repeat 1 26 0 1 859 950 65 8 0 chrX 35956794 35956917 -130693379 - B1_Mus2 SINE Alu 0 147 24 1 859 22 56 0 0 chrX 35956986 35957022 -130693274 + AT_rich Low_complexity Low_complexity 1 36 0 1 859 841 140 11 8 chrX 35957076 35957220 -130693076 + B2_Mm2 SINE B2 1 156 -42 1 859 423 0 0 0 chrX 35957230 35957277 -130693019 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 859 366 326 41 34 chrX 35957298 35957444 -130692852 - PB1D10 SINE Alu 0 147 1 1 859 227 328 0 32 chrX 35957388 35957451 -130692845 - B4A SINE B4 -151 141 81 1 859 728 223 119 31 chrX 35957484 35957678 -130692618 + B3 SINE B2 1 211 -5 1 859 1309 98 16 0 chrX 35957724 35957907 -130692389 - B2_Mm2 SINE B2 -8 187 2 1 859 979 98 0 0 chrX 35958214 35958346 -130691950 - B1_Mus1 SINE Alu -16 132 1 1 859 511 324 61 16 chrX 35958573 35958952 -130691344 - L1ME4a LINE L1 -224 5900 5505 1 859 25 0 0 0 chrX 35959340 35959365 -130690931 + AT_rich Low_complexity Low_complexity 1 25 0 1 859 379 277 24 0 chrX 35959373 35959456 -130690840 - PB1D10 SINE Alu -32 85 1 1 859 431 194 0 10 chrX 35959517 35959616 -130690680 + CT-rich Low_complexity Low_complexity 3 100 0 1 859 183 42 0 0 chrX 35959627 35959651 -130690645 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 859 1144 51 0 0 chrX 35959651 35959788 -130690508 - B1_Mus2 SINE Alu -9 138 2 1 859 593 207 11 171 chrX 35959796 35959971 -130690325 - B1F1 SINE Alu -2 147 1 1 859 495 195 212 0 chrX 35960046 35960164 -130690132 - ID_B1 SINE B4 -1 223 81 1 859 1062 103 7 0 chrX 35960193 35960338 -130689958 - B1_Mus2 SINE Alu 0 147 2 1 859 658 219 8 0 chrX 35960484 35960603 -130689693 - PB1D9 SINE Alu 0 120 1 1 859 354 136 167 0 chrX 35960620 35960686 -130689610 + HAL1-3A_ME LINE L1 1936 2012 -846 1 859 501 97 0 0 chrX 35960686 35960758 -130689538 + (TA)n Simple_repeat Simple_repeat 1 72 0 1 859 400 327 80 0 chrX 35960758 35960871 -130689425 - B1F1 SINE Alu -27 122 1 1 859 231 36 0 0 chrX 35960890 35960918 -130689378 + (TTCC)n Simple_repeat Simple_repeat 4 31 0 1 859 225 355 153 36 chrX 35960920 35961031 -130689265 - ID_B1 SINE B4 -20 204 81 1 859 483 63 0 0 chrX 35961057 35961120 -130689176 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 859 420 264 62 26 chrX 35961125 35961238 -130689058 - RSINE1 SINE B4 -46 119 3 1 859 611 186 0 26 chrX 35961593 35961709 -130688587 + PB1D9 SINE Alu 3 115 -5 1 859 411 248 152 0 chrX 35961774 35961879 -130688417 - B1F SINE Alu -26 123 3 1 859 462 252 18 45 chrX 35961944 35962056 -130688240 - PB1D7 SINE Alu 0 120 12 1 859 507 221 56 24 chrX 35962243 35962368 -130687928 - B1_Mur2 SINE Alu 0 149 21 1 859 1147 62 7 0 chrX 35962572 35962718 -130687578 + B1_Mus1 SINE Alu 1 147 -1 1 859 323 265 121 10 chrX 35962825 35962924 -130687372 + PB1D7 SINE Alu 1 110 -10 1 859 207 0 0 0 chrX 35962924 35962947 -130687349 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 859 735 245 14 0 chrX 35963029 35963176 -130687120 - B1_Mur1 SINE Alu 0 149 1 1 859 489 220 64 0 chrX 35963270 35963379 -130686917 - PB1D7 SINE Alu -1 119 4 1 859 292 311 40 0 chrX 35963401 35963475 -130686821 - PB1D10 SINE Alu -35 82 6 1 859 579 231 6 0 chrX 35963743 35963863 -130686433 + B1F SINE Alu 3 125 -24 1 859 267 278 38 182 chrX 35963751 35963883 -130686413 + MT2B2 LTR ERVL 175 287 -297 1 859 220 219 0 89 chrX 35963853 35963898 -130686398 + PB1D9 SINE Alu 5 45 -75 1 859 374 283 79 14 chrX 35964437 35964577 -130685719 - B1F SINE Alu 0 149 1 1 859 1273 27 0 0 chrX 35965358 35965506 -130684790 - B1_Mus1 SINE Alu 0 148 1 1 859 319 275 0 0 chrX 35965540 35965609 -130684687 + ID_B1 SINE B4 87 155 -69 1 859 702 253 7 0 chrX 35965831 35965977 -130684319 - B1_Mus1 SINE Alu -1 147 1 1 859 395 188 167 0 chrX 35965980 35966076 -130684220 - PB1D10 SINE Alu 0 117 6 1 859 220 208 94 0 chrX 35966029 35966082 -130684214 - B4A SINE B4 -151 141 84 1 859 303 259 0 12 chrX 35966106 35966188 -130684108 + ID4 SINE ID 2 82 -1 1 859 225 299 79 45 chrX 35967011 35967282 -130683014 - L1MC5 LINE L1 -168 7793 7519 1 859 1126 68 0 20 chrX 35967282 35967433 -130682863 - B1_Mus1 SINE Alu 0 148 1 1 859 225 299 79 45 chrX 35967433 35967515 -130682781 - L1MC5 LINE L1 -443 7518 7428 1 859 209 204 0 0 chrX 35967924 35967968 -130682328 + (CAGAGA)n Simple_repeat Simple_repeat 3 46 0 1 859 462 202 125 0 chrX 35968492 35968596 -130681700 + PB1D9 SINE Alu 2 118 -2 1 859 1209 22 0 0 chrX 35968998 35969136 -130681160 - B1_Mus2 SINE Alu -5 142 5 1 859 661 181 126 0 chrX 35969587 35969714 -130680582 + B1_Mur1 SINE Alu 2 144 -5 1 859 801 233 57 5 chrX 35969797 35969991 -130680305 + B3 SINE B2 1 204 -12 1 859 515 241 49 14 chrX 35970198 35970341 -130679955 - B1F SINE Alu -1 148 1 1 859 1399 86 5 0 chrX 35970903 35971090 -130679206 + B2_Mm1a SINE B2 1 188 -5 1 859 1138 62 7 0 chrX 35971302 35971448 -130678848 - B1_Mus1 SINE Alu -1 147 1 1 859 324 303 37 0 chrX 35971625 35971734 -130678562 + PB1D10 SINE Alu 5 117 0 1 859 317 292 30 101 chrX 35971739 35971838 -130678458 + B1_Mur2 SINE Alu 1 92 -57 1 859 252 247 68 0 chrX 35971943 35972016 -130678280 + ID_B1 SINE B4 146 223 -1 1 859 217 172 239 45 chrX 35971964 35972031 -130678265 + B1_Mur2 SINE Alu 64 143 -6 1 859 851 237 32 0 chrX 35972401 35972591 -130677705 - B3 SINE B2 -19 197 2 1 859 312 240 110 40 chrX 35972689 35972789 -130677507 - PB1D10 SINE Alu -10 107 1 1 859 235 253 33 132 chrX 35973374 35973465 -130676831 - ID2 SINE ID -1 82 1 1 859 911 57 8 0 chrX 35973583 35973706 -130676590 + B1_Mm SINE Alu 23 146 -1 1 859 690 206 30 8 chrX 35973828 35973960 -130676336 + RSINE1 SINE B4 2 136 -29 1 859 814 267 0 56 chrX 35974187 35974421 -130675875 - ID_B1 SINE B4 -2 222 2 1 859 600 14 0 0 chrX 35974673 35974742 -130675554 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 859 1131 122 0 0 chrX 35975208 35975372 -130674924 + B2_Mm2 SINE B2 2 165 -30 1 859 379 98 31 0 chrX 35975423 35975520 -130674776 + B2_Mm2 SINE B2 47 190 -5 1 859 691 178 78 56 chrX 35975531 35975710 -130674586 + B2_Mm2 SINE B2 1 183 -12 1 859 485 277 16 32 chrX 35975853 35975976 -130674320 - MIRb SINE MIR -121 147 27 1 859 420 94 0 0 chrX 35976411 35976468 -130673828 + (TTCC)n Simple_repeat Simple_repeat 1 57 0 1 859 1064 129 11 0 chrX 35976468 35976646 -130673650 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 859 420 94 0 0 chrX 35976646 35976652 -130673644 + (TTCC)n Simple_repeat Simple_repeat 3 8 0 1 859 793 151 19 70 chrX 35976916 35977073 -130673223 - B1_Mur3 SINE Alu 0 149 1 1 859 683 223 135 11 chrX 35977179 35977460 -130672836 + MER33 DNA MER1_type 5 320 -4 1 859 1008 217 45 5 chrX 35977670 35977869 -130672427 - B3 SINE B2 -8 208 2 1 859 574 237 72 0 chrX 35978053 35978192 -130672104 - RMER15 LTR ERVL -2 573 425 1 859 1013 57 42 7 chrX 35978280 35978422 -130671874 - B1_Mm SINE Alu 0 147 1 1 859 1453 63 26 0 chrX 35978434 35978623 -130671673 - B2_Mm2 SINE B2 -1 194 1 1 859 488 310 35 0 chrX 35978918 35979089 -130671207 - Lx8 LINE L1 -260 7213 7037 1 859 628 229 92 0 chrX 35979417 35979548 -130670748 - B1_Mur2 SINE Alu -6 143 1 1 859 713 51 0 30 chrX 35979599 35979700 -130670596 + B1_Mus2 SINE Alu 50 147 0 1 859 1182 86 19 0 chrX 35979727 35979889 -130670407 + B2_Mm2 SINE B2 1 165 -30 1 859 198 0 0 0 chrX 35979911 35979933 -130670363 + (T)n Simple_repeat Simple_repeat 1 22 0 1 859 239 256 176 55 chrX 35979938 35980029 -130670267 - RSINE1 SINE B4 -61 104 3 1 859 412 264 33 0 chrX 35980042 35980133 -130670163 - PB1D10 SINE Alu -5 112 19 1 859 228 212 14 83 chrX 35980074 35980146 -130670150 - MT2B2 LTR ERVL -346 238 172 1 859 368 291 8 93 chrX 35980502 35980631 -130669665 + PB1D7 SINE Alu 2 119 -1 1 859 663 241 6 64 chrX 35980635 35980808 -130669488 + RSINE1 SINE B4 1 163 -2 1 859 592 271 5 88 chrX 35980819 35981013 -130669283 + B3A SINE B2 3 180 -18 1 859 588 204 0 34 chrX 35981819 35981936 -130668360 - B1_Mur4 SINE Alu -7 143 31 1 859 542 271 60 28 chrX 35982039 35982221 -130668075 - B3A SINE B2 -10 188 1 1 859 582 285 95 0 chrX 35982246 35982383 -130667913 + RSINE1 SINE B4 5 154 -11 1 859 1413 60 16 5 chrX 35982768 35982952 -130667344 + B2_Mm2 SINE B2 2 187 -8 1 859 1212 35 0 0 chrX 35983410 35983552 -130666744 - B1_Mus1 SINE Alu -5 143 2 1 859 363 258 72 0 chrX 35983814 35983911 -130666385 + PB1D7 SINE Alu 1 104 -16 1 859 23 54 0 0 chrX 35984139 35984176 -130666120 + AT_rich Low_complexity Low_complexity 1 37 0 1 859 318 50 0 0 chrX 35985513 35985553 -130664743 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 859 773 72 8 23 chrX 35985757 35985886 -130664410 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 1 859 894 136 0 7 chrX 35985889 35986030 -130664266 - B1_Mus2 SINE Alu -2 145 6 1 859 420 202 29 101 chrX 35985922 35986060 -130664236 - MT2B LTR ERVL -337 264 137 1 859 297 215 0 0 chrX 35986067 35986160 -130664136 + (CCA)n Simple_repeat Simple_repeat 1 93 0 1 859 419 268 197 34 chrX 35986731 35986970 -130663326 + B4A SINE B4 1 278 -14 1 859 237 297 13 13 chrX 35987004 35987079 -130663217 - MIR SINE MIR -122 140 66 1 859 355 321 0 0 chrX 35987206 35987312 -130662984 - PB1D10 SINE Alu -11 106 1 1 859 258 32 0 0 chrX 35988321 35988352 -130661944 + (CGGGG)n Simple_repeat Simple_repeat 4 34 0 1 859 225 348 161 19 chrX 35988706 35988911 -130661385 + MIRb SINE MIR 35 268 0 1 859 982 75 0 183 chrX 35989139 35989319 -130660977 - B1_Mus1 SINE Alu 0 148 2 1 859 340 282 11 23 chrX 35989365 35989452 -130660844 + PB1D10 SINE Alu 18 103 -14 1 859 206 32 0 31 chrX 35989880 35989912 -130660384 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 1 859 207 204 0 0 chrX 35990098 35990142 -130660154 + T-rich Low_complexity Low_complexity 1 44 0 1 859 225 94 0 0 chrX 35990844 35990876 -130659420 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 859 498 189 31 21 chrX 35990902 35990999 -130659297 + B1_Mur4 SINE Alu 1 98 -49 1 859 1358 90 37 0 chrX 35991012 35991200 -130659096 - B2_Mm2 SINE B2 0 195 1 1 859 1067 63 7 40 chrX 35991202 35991351 -130658945 - B1_Mus1 SINE Alu 0 148 5 1 859 373 36 18 18 chrX 35991597 35991653 -130658643 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 859 398 79 0 16 chrX 35991722 35991786 -130658510 + (GA)n Simple_repeat Simple_repeat 1 63 0 1 859 441 0 0 0 chrX 35991920 35991969 -130658327 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 859 399 41 0 0 chrX 35991969 35992017 -130658279 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 859 288 196 18 0 chrX 35992269 35992325 -130657971 + B1_Mus2 SINE Alu 6 62 -85 1 859 756 87 0 0 chrX 35992320 35992423 -130657873 - B2_Mm2 SINE B2 -91 104 2 1 859 292 265 42 56 chrX 35992423 35992490 -130657806 - B1F2 SINE Alu -66 83 18 1 859 279 0 0 0 chrX 35992514 35992545 -130657751 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1 859 203 250 0 0 chrX 35992554 35992598 -130657698 + CT-rich Low_complexity Low_complexity 1 44 0 1 859 225 108 0 0 chrX 35992598 35992635 -130657661 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 859 647 302 16 22 chrX 35992643 35992826 -130657470 - B4 SINE B4 -5 287 106 1 859 238 167 24 0 chrX 35992840 35992882 -130657414 - RMER15 LTR ERVL 0 575 533 1 859 378 0 0 0 chrX 35992898 35992940 -130657356 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 859 633 246 22 0 chrX 35993253 35993387 -130656909 - ID_B1 SINE B4 0 224 88 1 859 205 205 0 0 chrX 35993503 35993542 -130656754 + A-rich Low_complexity Low_complexity 1 39 0 1 859 235 173 115 0 chrX 35993639 35993691 -130656605 + CR1_Mam LINE CR1 1474 1531 -673 1 859 744 205 151 14 chrX 35994030 35994248 -130656048 - MER2 DNA MER2_type -26 319 72 1 859 414 302 0 65 chrX 35994241 35994365 -130655931 - PB1D9 SINE Alu -2 118 3 1 859 652 183 123 33 chrX 35994452 35994686 -130655610 + MTB LTR MaLR 1 223 -156 1 859 411 281 40 46 chrX 35995094 35995269 -130655027 - MamGyp-int LTR Gypsy -2223 2839 2666 1 859 666 284 91 69 chrX 35996032 35996263 -130654033 - B4 SINE B4 -4 288 53 1 859 809 209 92 16 chrX 35996266 35996451 -130653845 + B3 SINE B2 1 199 -17 1 859 290 246 0 0 chrX 35996497 35996558 -130653738 - B4A SINE B4 -229 63 3 1 859 246 143 48 0 chrX 35996663 35996726 -130653570 + CT-rich Low_complexity Low_complexity 2 67 0 1 859 21 0 0 0 chrX 35996897 35996918 -130653378 + AT_rich Low_complexity Low_complexity 1 21 0 1 859 4638 26 6 2 chrX 35996971 35997517 -130652779 - L1Md_F3 LINE L1 -3 6581 6034 1 859 1403 172 14 54 chrX 35997705 35997754 -130652542 - ORR1C1 LTR MaLR -8 370 334 1 859 2657 25 19 0 chrX 35997754 35998074 -130652222 - L1Md_F2 LINE L1 0 6582 6257 1 859 1403 172 14 54 chrX 35998074 35998301 -130651995 - ORR1C1 LTR MaLR -45 333 105 1 859 334 191 29 14 chrX 35998340 35998409 -130651887 + ID4_ SINE ID 3 72 -11 1 859 266 305 5 57 chrX 35998532 35998638 -130651658 - ID4 SINE ID -51 101 2 1 859 253 201 4 38 chrX 35998660 35998719 -130651577 - B1F SINE Alu -2 147 60 1 859 321 26 0 0 chrX 35998898 35998936 -130651360 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 859 844 132 7 42 chrX 35999099 35999241 -130651055 - B1_Mur4 SINE Alu -13 137 1 1 859 24 0 0 0 chrX 35999253 35999277 -130651019 + AT_rich Low_complexity Low_complexity 1 24 0 1 859 978 308 50 3 chrX 35999279 35999621 -130650675 - Lx5 LINE L1 -11 7039 6682 1 859 1259 113 15 5 chrX 35999699 35999904 -130650392 - Lx2 LINE L1 -4 6993 6787 1 859 498 67 0 39 chrX 35999906 35999984 -130650312 + 4.5SRNA scRNA scRNA 4 78 -16 1 859 255 130 0 0 chrX 36000000 36000054 -130650242 + (CTG)n Simple_repeat Simple_repeat 2 55 0 1 859 420 169 0 0 chrX 36000066 36000143 -130650153 + CT-rich Low_complexity Low_complexity 2 78 0 2 859 387 174 0 0 chrX 36000143 36000212 -130650084 - B1_Mm SINE Alu -1 146 78 3 859 404 307 85 7 chrX 36000321 36000473 -130649823 - ID_B1 SINE B4 -46 246 78 4 859 342 0 0 0 chrX 36000574 36000612 -130649684 + (TAA)n Simple_repeat Simple_repeat 2 39 0 5 859 402 268 88 18 chrX 36000635 36000749 -130649547 - B1F SINE Alu -10 139 18 6 859 1049 272 144 41 chrX 36000791 36001204 -130649092 + MLT2B1 LTR ERVL 8 521 -80 7 859 347 331 59 24 chrX 36001407 36001577 -130648719 + MER2 DNA MER2_type 6 181 -164 8 859 333 0 0 0 chrX 36001666 36001703 -130648593 + (TG)n Simple_repeat Simple_repeat 1 37 0 9 859 450 0 0 0 chrX 36001703 36001752 -130648544 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 859 524 243 108 0 chrX 36001753 36001864 -130648432 - B4 SINE B4 -114 178 56 1 859 259 308 131 51 chrX 36001903 36002040 -130648256 + MER2 DNA MER2_type 179 326 -19 8 859 252 0 0 0 chrX 36002204 36002232 -130648064 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 859 454 259 0 61 chrX 36002233 36002348 -130647948 - PB1D10 SINE Alu -9 108 1 1 859 8369 42 1 3 chrX 36002366 36003695 -130646601 - L1Md_F2 LINE L1 0 6582 5257 1 859 195 139 0 0 chrX 36003707 36003743 -130646553 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 1 859 480 18 0 0 chrX 36004410 36004467 -130645829 + (GGGA)n Simple_repeat Simple_repeat 2 58 0 1 859 301 341 60 12 chrX 36004847 36005013 -130645283 + MER5B DNA MER1_type 3 176 -2 1 859 281 269 0 0 chrX 36005316 36005383 -130644913 - L2a LINE L2 0 3426 3360 1 859 650 324 88 93 chrX 36005439 36005827 -130644469 + LTR75 LTR ERVL 5 390 -172 1 859 478 263 72 7 chrX 36006263 36006401 -130643895 + B1F1 SINE Alu 1 147 -2 2 859 1052 215 45 10 chrX 36006428 36006630 -130643666 + B3 SINE B2 2 210 -6 2 859 1207 244 40 23 chrX 36006648 36006950 -130643346 - Lx5 LINE L1 -8 7042 6736 2 859 235 204 0 0 chrX 36007026 36007070 -130643226 + Lx9 LINE L1 7057 7100 -544 2 859 1035 122 0 0 chrX 36007077 36007224 -130643072 - B1_Mur4 SINE Alu 0 150 4 2 859 474 148 0 169 chrX 36007112 36007242 -130643054 - MT2B LTR ERVL -337 264 157 2 859 659 319 68 4 chrX 36007242 36007522 -130642774 + Lx8 LINE L1 6969 7266 -207 2 859 1410 92 16 16 chrX 36007641 36007828 -130642468 - B2_Mm2 SINE B2 -7 188 2 2 859 22 0 0 0 chrX 36007885 36007907 -130642389 + AT_rich Low_complexity Low_complexity 1 22 0 2 859 215 61 30 0 chrX 36007907 36007940 -130642356 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 2 859 580 226 121 121 chrX 36007941 36008147 -130642149 + B3 SINE B2 1 206 -10 3 859 2148 125 36 12 chrX 36008755 36009088 -130641208 - RLTR14 LTR ERV1 -41 341 1 3 859 405 0 0 0 chrX 36009113 36009158 -130641138 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 859 1135 157 87 0 chrX 36009308 36009493 -130640803 - B3 SINE B2 -14 202 2 3 859 370 277 129 0 chrX 36009496 36009597 -130640699 + LTR16A LTR ERVL 99 212 -239 3 859 258 277 74 11 chrX 36009623 36009718 -130640578 + LTR16A LTR ERVL 265 365 -91 3 859 392 341 24 0 chrX 36009775 36009898 -130640398 + HERV16-int LTR ERVL 9 134 -4862 3 859 281 325 8 40 chrX 36009995 36010103 -130640193 + CT-rich Low_complexity Low_complexity 19 123 0 3 859 1696 36 5 10 chrX 36010103 36010297 -130639999 - B2_Mm1a SINE B2 0 193 1 3 859 281 325 8 40 chrX 36010297 36010313 -130639983 + polypyrimidine Low_complexity Low_complexity 3 18 0 3 859 386 261 12 3 chrX 36010332 36010424 -130639872 - PB1 SINE Alu -223 91 1 3 859 264 333 52 0 chrX 36011323 36011419 -130638877 + HERV16-int LTR ERVL 1219 1319 -3677 3 859 787 301 137 50 chrX 36011461 36011944 -130638352 - MT2A LTR ERVL -8 525 1 4 859 668 262 22 39 chrX 36012108 36012287 -130638009 + B3 SINE B2 37 212 -4 4 859 480 196 98 0 chrX 36012309 36012401 -130637895 + B1_Mur4 SINE Alu 42 142 -8 4 859 951 107 0 0 chrX 36012412 36012581 -130637715 + (CA)n Simple_repeat Simple_repeat 2 170 0 4 859 21 0 0 0 chrX 36012625 36012646 -130637650 + AT_rich Low_complexity Low_complexity 1 21 0 4 859 184 200 31 0 chrX 36013258 36013323 -130636973 + CT-rich Low_complexity Low_complexity 3 69 0 4 859 1221 57 0 0 chrX 36013351 36013491 -130636805 - B1_Mus1 SINE Alu -7 141 2 4 859 1021 144 20 0 chrX 36013494 36013640 -130636656 - B1_Mur3 SINE Alu 0 149 1 4 859 231 114 0 0 chrX 36013649 36013684 -130636612 + (T)n Simple_repeat Simple_repeat 1 35 0 4 859 237 170 64 0 chrX 36014846 36014893 -130635403 - PB1D10 SINE Alu -26 91 42 4 859 42167 6 1 0 chrX 36014900 36021278 -130629018 - L1Md_A LINE L1 0 6582 201 5 859 900 228 138 0 chrX 36021363 36021552 -130628744 - B3 SINE B2 0 216 2 5 859 482 250 109 36 chrX 36021581 36021718 -130628578 - B1F SINE Alu 0 149 3 5 859 214 67 0 0 chrX 36022142 36022172 -130628124 - B3 SINE B2 -104 112 83 5 859 832 142 7 14 chrX 36022429 36022572 -130627724 + B1_Mur4 SINE Alu 9 150 0 5 859 414 0 0 0 chrX 36023155 36023201 -130627095 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 859 3468 105 25 6 chrX 36023313 36023794 -130626502 - Lx LINE L1 0 6654 6165 5 859 912 160 27 20 chrX 36023836 36023983 -130626313 - B1_Mur4 SINE Alu -1 149 2 5 859 382 266 0 31 chrX 36024256 36024353 -130625943 + ID_B1 SINE B4 119 212 -12 5 859 276 372 10 10 chrX 36024415 36024518 -130625778 - L2b LINE L2 -237 3138 3036 5 859 929 249 52 0 chrX 36024522 36024751 -130625545 + MER2 DNA MER2_type 25 265 -80 6 859 355 336 70 0 chrX 36025078 36025206 -130625090 - MLT1B LTR MaLR -29 361 225 6 859 324 360 69 77 chrX 36025310 36025397 -130624899 - B4A SINE B4 -18 274 3 6 859 656 288 32 16 chrX 36025397 36025584 -130624712 - B3A SINE B2 -6 192 3 6 859 488 252 0 66 chrX 36025584 36025708 -130624588 - B4A SINE B4 -59 233 119 6 859 235 0 0 160 chrX 36025712 36025831 -130624465 + (CAAGG)n Simple_repeat Simple_repeat 5 104 0 6 859 504 134 0 0 chrX 36025831 36025928 -130624368 + (CAG)n Simple_repeat Simple_repeat 2 98 0 6 859 576 176 0 0 chrX 36025914 36026084 -130624212 + (CAA)n Simple_repeat Simple_repeat 1 170 0 6 859 1109 269 104 3 chrX 36026440 36026749 -130623547 - MLT1A0 LTR MaLR -5 360 21 6 859 228 308 64 0 chrX 36027228 36027306 -130622990 - MIRc SINE MIR -108 160 78 6 859 216 0 0 0 chrX 36027306 36027330 -130622966 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 859 797 165 0 12 chrX 36027469 36027629 -130622667 + T-rich Low_complexity Low_complexity 1 158 0 7 859 561 176 58 88 chrX 36027629 36027766 -130622530 - B1_Mur4 SINE Alu 0 150 18 7 859 754 188 39 0 chrX 36027793 36027921 -130622375 - B1_Mur3 SINE Alu -16 133 1 7 859 23 33 0 0 chrX 36028052 36028082 -130622214 + AT_rich Low_complexity Low_complexity 1 30 0 7 859 384 77 0 0 chrX 36028228 36028280 -130622016 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 7 859 1283 93 29 0 chrX 36028339 36028511 -130621785 + B2_Mm1t SINE B2 3 179 -14 7 859 436 102 286 7 chrX 36028539 36028653 -130621643 + B2_Mm2 SINE B2 47 195 0 7 859 756 86 0 0 chrX 36028979 36029084 -130621212 + (TTCTC)n Simple_repeat Simple_repeat 1 105 0 7 859 420 151 70 16 chrX 36029086 36029214 -130621082 + CT-rich Low_complexity Low_complexity 1 135 0 7 859 1026 258 45 81 chrX 36030227 36030531 -130619765 + MLT1A0 LTR MaLR 1 299 -66 8 859 1177 76 7 0 chrX 36030531 36030675 -130619621 + B1_Mm SINE Alu 1 145 -2 8 859 390 42 0 0 chrX 36030675 36030723 -130619573 + (TA)n Simple_repeat Simple_repeat 2 49 0 8 859 1026 258 45 81 chrX 36030723 36030776 -130619520 + MLT1A0 LTR MaLR 300 345 -20 8 859 307 241 52 136 chrX 36030910 36031064 -130619232 - ORR1E LTR MaLR -41 318 178 8 859 336 24 0 0 chrX 36031172 36031213 -130619083 + (CAA)n Simple_repeat Simple_repeat 2 42 0 8 859 273 257 16 142 chrX 36031303 36031430 -130618866 + Charlie4a DNA MER1_type 244 354 -154 8 859 702 279 75 26 chrX 36031477 36031705 -130618591 + B4A SINE B4 2 240 -52 8 859 402 151 0 0 chrX 36031712 36031785 -130618511 + T-rich Low_complexity Low_complexity 1 73 0 8 859 829 204 0 70 chrX 36031785 36031801 -130618495 - B1_Mur2 SINE Alu 0 149 138 8 859 1276 41 0 13 chrX 36031801 36031950 -130618346 - B1_Mus2 SINE Alu 0 147 1 8 859 829 204 0 70 chrX 36031950 36032091 -130618205 - B1_Mur2 SINE Alu -12 137 3 8 859 297 0 0 0 chrX 36032355 36032388 -130617908 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 9 859 6316 97 18 15 chrX 36032396 36033255 -130617041 - Lx LINE L1 -6 6648 5788 9 859 180 0 0 0 chrX 36033257 36033277 -130617019 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 9 859 3914 90 50 16 chrX 36033277 36033833 -130616463 - Lx3A LINE L1 -15 6966 6392 9 859 908 66 7 0 chrX 36033845 36033982 -130616314 + (CA)n Simple_repeat Simple_repeat 2 139 0 9 859 1335 257 70 8 chrX 36035379 36035748 -130614548 - Lx7 LINE L1 -377 7319 6928 9 859 183 184 0 0 chrX 36035819 36035857 -130614439 + (TG)n Simple_repeat Simple_repeat 1 38 0 9 859 1146 266 86 0 chrX 36035867 36036134 -130614162 - B4A SINE B4 -2 290 1 9 859 266 304 17 49 chrX 36036136 36036265 -130614031 - L1MD LINE L1 -1016 5130 4970 9 859 1268 47 87 66 chrX 36036265 36036448 -130613848 + B2_Mm2 SINE B2 2 188 -7 9 859 266 286 35 101 chrX 36036448 36036582 -130613714 - L1MD LINE L1 -1177 4969 4846 9 859 307 308 0 96 chrX 36036611 36036658 -130613638 + PB1 SINE Alu 24 62 -65 1 859 5217 40 9 0 chrX 36036658 36037240 -130613056 - LTRIS_Mus LTR ERV1 0 587 1 1 859 307 308 0 96 chrX 36037240 36037307 -130612989 + PB1 SINE Alu 63 127 0 1 859 502 310 87 22 chrX 36037405 36037728 -130612568 - L1M5 LINE L1 -1302 4844 4501 1 859 698 297 61 23 chrX 36037906 36038120 -130612176 - B4A SINE B4 -67 225 4 1 859 233 109 0 21 chrX 36038506 36038553 -130611743 + (GAAAA)n Simple_repeat Simple_repeat 5 50 0 1 859 1429 82 21 16 chrX 36039474 36039661 -130610635 - B2_Mm2 SINE B2 -7 188 1 1 859 1823 133 7 0 chrX 36039661 36039940 -130610356 - ORR1A4 LTR MaLR -41 288 8 1 859 406 255 9 86 chrX 36039943 36040059 -130610237 - B3A SINE B2 -89 109 3 1 859 391 299 58 21 chrX 36040157 36040345 -130609951 - L1MC5 LINE L1 -464 7497 7303 1 859 1831 229 22 7 chrX 36040642 36041055 -130609241 + MTD LTR MaLR 1 419 0 1 859 547 205 58 148 chrX 36041127 36041168 -130609128 + B3A SINE B2 1 41 -157 1 859 704 178 145 15 chrX 36041168 36041299 -130608997 + B1_Mur3 SINE Alu 1 148 -1 1 859 363 73 0 0 chrX 36041305 36041360 -130608936 + (CAAG)n Simple_repeat Simple_repeat 2 56 0 1 859 547 205 58 148 chrX 36041360 36041466 -130608830 + B3A SINE B2 42 141 -57 1 859 441 0 0 0 chrX 36041466 36041515 -130608781 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 859 375 283 10 0 chrX 36041713 36041812 -130608484 - RMER15 LTR ERVL -105 470 371 1 859 1246 211 5 0 chrX 36042057 36042261 -130608035 + B3 SINE B2 4 208 -8 1 859 1133 198 34 0 chrX 36042308 36042515 -130607781 - Lx9 LINE L1 -343 7301 7088 1 859 390 165 57 19 chrX 36042519 36042624 -130607672 + Lx9 LINE L1 7529 7637 -7 1 859 243 326 102 11 chrX 36043404 36043581 -130606715 + MIR SINE MIR 70 262 0 1 859 331 371 45 32 chrX 36043751 36043971 -130606325 + MIR SINE MIR 6 228 -34 1 107 8195 50 7 1 chrX 36044100 36045379 -130604917 - L1_Mus1 LINE L1 0 6567 5282 1 860 479 363 132 35 chrX 36045738 36046026 -130604270 + MLT1G1 LTR MaLR 264 579 0 1 860 387 379 24 24 chrX 36046248 36046494 -130603802 + L2 LINE L2 2455 2700 -719 1 860 586 368 79 33 chrX 36046494 36046914 -130603382 + LTR16D1 LTR ERVL 3 467 -208 1 860 285 324 47 93 chrX 36046943 36047093 -130603203 + LTR16D1 LTR ERVL 509 651 0 1 860 361 151 105 0 chrX 36047131 36047217 -130603079 + Lx5 LINE L1 6956 7050 0 1 860 589 286 61 7 chrX 36047263 36047411 -130602885 - RSINE1 SINE B4 -6 159 4 1 860 385 311 41 68 chrX 36048204 36048440 -130601856 + L1ME2 LINE L1 5879 6113 -51 1 860 995 215 80 0 chrX 36048440 36048640 -130601656 + B3 SINE B2 1 216 0 1 860 385 311 41 68 chrX 36048640 36048696 -130601600 + L1ME2 LINE L1 6114 6162 -2 1 860 856 296 51 63 chrX 36049452 36049802 -130600494 - MLT1E LTR MaLR 0 653 308 1 860 227 309 0 35 chrX 36049995 36050052 -130600244 - MLT1E LTR MaLR -558 96 42 1 860 289 189 37 19 chrX 36050977 36051031 -130599265 - tRNA-Met_ tRNA tRNA -21 55 1 1 860 943 163 14 0 chrX 36051036 36051177 -130599119 - B1_Mur4 SINE Alu -7 143 1 1 860 2090 171 63 28 chrX 36051304 36051701 -130598595 - MTD LTR MaLR -8 411 1 1 860 540 311 75 35 chrX 36052225 36052452 -130597844 + MIRb SINE MIR 15 250 -18 1 860 318 320 65 65 chrX 36052817 36053141 -130597155 - HAL1 LINE L1 -981 1526 1203 1 860 1669 6 0 0 chrX 36053296 36053477 -130596819 - L1Md_A LINE L1 0 6582 6402 1 860 468 0 0 0 chrX 36053483 36053535 -130596761 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 1 860 349 286 43 43 chrX 36053895 36054012 -130596284 + HAL1 LINE L1 833 949 -1558 1 860 321 164 0 0 chrX 36054045 36054118 -130596178 + CT-rich Low_complexity Low_complexity 1 73 0 1 860 804 139 49 0 chrX 36054118 36054240 -130596056 - B1_Mus2 SINE Alu -5 142 15 1 860 5257 166 30 5 chrX 36054521 36055440 -130594856 - Lx5 LINE L1 -443 6607 5666 1 860 257 271 17 17 chrX 36055445 36055505 -130594791 + B1F1 SINE Alu 2 61 -88 1 860 563 237 6 90 chrX 36055472 36055493 -130594803 + ID SINE ID 66 72 -152 1 860 1066 63 0 3 chrX 36055493 36055642 -130594654 + B1_Mus2 SINE Alu 1 145 -3 1 860 261 0 0 0 chrX 36055642 36055671 -130594625 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1 860 1070 215 14 5 chrX 36056262 36056472 -130593824 + B3 SINE B2 5 216 0 1 860 291 300 0 0 chrX 36056940 36057010 -130593286 - RSINE1 SINE B4 -58 107 38 1 860 525 88 0 36 chrX 36056992 36057075 -130593221 - B2_Mm2 SINE B2 -109 86 7 1 860 764 243 30 70 chrX 36057656 36057792 -130592504 - Lx8 LINE L1 0 7473 7348 1 860 680 210 158 11 chrX 36057792 36057975 -130592321 - B3 SINE B2 -5 211 2 1 860 764 243 30 70 chrX 36057975 36058139 -130592157 - Lx8 LINE L1 -126 7347 7185 1 860 7477 88 4 0 chrX 36058643 36059962 -130590334 - L1_Mus4 LINE L1 0 6636 5314 1 860 338 62 0 0 chrX 36059961 36060009 -130590287 - MusHAL1 LINE L1 -1469 1243 1196 1 860 5581 109 71 7 chrX 36060006 36060920 -130589376 - L1VL4 LINE L1 -5329 973 1 1 860 541 348 32 8 chrX 36062164 36062413 -130587883 - L1M4 LINE L1 -5844 698 444 1 860 225 0 0 0 chrX 36062775 36062800 -130587496 + (T)n Simple_repeat Simple_repeat 1 25 0 1 860 401 287 104 6 chrX 36062865 36063047 -130587249 - L1MC3 LINE L1 -316 7469 7270 1 860 229 361 90 45 chrX 36063061 36063266 -130587030 + MIRb SINE MIR 3 233 -35 1 860 377 314 8 17 chrX 36063366 36063486 -130586810 + PB1D7 SINE Alu 1 119 -1 1 860 339 287 66 28 chrX 36063691 36063851 -130586445 + MIRc SINE MIR 8 175 -101 1 860 372 360 6 34 chrX 36065452 36065621 -130584675 - Charlie25 DNA MER1_type -637 1887 1724 1 860 835 155 28 0 chrX 36065621 36065763 -130584533 + B1_Mur3 SINE Alu 3 148 -1 1 860 878 232 79 0 chrX 36065832 36066022 -130584274 + B3 SINE B2 1 205 -11 1 860 2913 6 0 0 chrX 36066131 36066453 -130583843 + RLTRETN_Mm LTR ERVK 1 322 0 1 860 40773 14 1 2 chrX 36066453 36071306 -130578990 + MMETn-int LTR ERVK 1 4844 0 1 860 2913 6 0 0 chrX 36071306 36071628 -130578668 + RLTRETN_Mm LTR ERVK 1 322 0 1 860 434 384 32 24 chrX 36071861 36072112 -130578184 - Charlie25 DNA MER1_type -1016 1508 1256 1 860 948 296 82 9 chrX 36072231 36072684 -130577612 + L1MD1 LINE L1 5618 6103 -139 1 860 906 199 281 17 chrX 36072702 36072983 -130577313 - MTEa LTR MaLR -3 376 1 1 860 234 269 0 0 chrX 36072989 36073056 -130577240 + L1MD1 LINE L1 6140 6206 -36 1 860 30 27 0 0 chrX 36073078 36073115 -130577181 + AT_rich Low_complexity Low_complexity 1 37 0 1 860 31 68 0 0 chrX 36073148 36073207 -130577089 + AT_rich Low_complexity Low_complexity 1 59 0 1 860 204 40 0 0 chrX 36073278 36073303 -130576993 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 860 561 232 92 72 chrX 36073355 36073550 -130576746 - B4A SINE B4 -83 209 11 1 860 2129 297 72 54 chrX 36073555 36074195 -130576101 - Charlie25 DNA MER1_type -1288 1236 567 1 860 192 40 0 0 chrX 36074195 36074220 -130576076 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 860 2129 297 72 54 chrX 36074220 36074539 -130575757 - Charlie25 DNA MER1_type -1958 566 260 1 860 455 193 0 24 chrX 36074620 36074705 -130575591 - ID4 SINE ID 0 83 1 1 860 3611 247 49 29 chrX 36076088 36077106 -130573190 + Lx8 LINE L1 6433 7471 -2 1 860 210 298 0 0 chrX 36077242 36077289 -130573007 - MER91A DNA Tip100 -147 49 3 1 860 206 174 22 0 chrX 36077466 36077512 -130572784 + CT-rich Low_complexity Low_complexity 2 48 0 1 860 262 343 101 0 chrX 36077546 36077645 -130572651 - PB1D10 SINE Alu -1 116 8 1 860 303 289 13 13 chrX 36077942 36078019 -130572277 - ID SINE ID -147 77 1 1 860 1210 87 40 17 chrX 36078063 36078239 -130572057 - B2_Mm2 SINE B2 -15 180 1 1 860 670 280 6 6 chrX 36078292 36078450 -130571846 - RSINE1 SINE B4 0 165 8 1 860 290 304 73 30 chrX 36078760 36078903 -130571393 + MIR3 SINE MIR 14 168 -100 1 860 527 264 16 0 chrX 36079338 36079467 -130570829 + MER5A1 DNA MER1_type 36 166 0 1 860 234 304 167 0 chrX 36080594 36080696 -130569600 + MIR SINE MIR 4 122 -140 1 860 245 368 198 24 chrX 36080775 36081104 -130569192 + L2b LINE L2 2990 3375 0 1 860 1831 117 159 16 chrX 36081289 36081610 -130568686 - ORR1B2 LTR MaLR 0 367 1 1 860 210 236 18 0 chrX 36081702 36081757 -130568539 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 860 213 164 29 29 chrX 36081852 36081921 -130568375 + CT-rich Low_complexity Low_complexity 4 72 0 1 860 486 271 60 8 chrX 36081921 36082055 -130568241 - B1F SINE Alu -5 144 4 1 860 814 156 21 14 chrX 36082721 36082864 -130567432 + B1_Mur4 SINE Alu 2 145 -5 1 860 293 268 10 20 chrX 36083143 36083242 -130567054 + MER53 DNA hAT 8 105 -88 1 860 231 219 27 0 chrX 36083418 36083491 -130566805 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 860 243 0 0 0 chrX 36083562 36083589 -130566707 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 860 230 253 0 127 chrX 36084639 36084767 -130565529 + BC1_Mm scRNA scRNA 1 117 -35 1 860 201 74 0 0 chrX 36084852 36084879 -130565417 + (TCTG)n Simple_repeat Simple_repeat 3 29 0 1 860 472 252 73 0 chrX 36085223 36085346 -130564950 + MLT1A LTR MaLR 2 133 -232 1 860 694 180 70 21 chrX 36085420 36085504 -130564792 + B1_Mur4 SINE Alu 1 88 -62 1 860 243 0 0 0 chrX 36085504 36085531 -130564765 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 860 694 180 70 21 chrX 36085531 36085588 -130564708 + B1_Mur4 SINE Alu 89 149 -1 1 860 485 244 42 38 chrX 36085591 36085772 -130564524 + MLT1A LTR MaLR 211 390 0 1 860 217 171 0 24 chrX 36086329 36086371 -130563925 + A-rich Low_complexity Low_complexity 2 42 0 1 860 281 371 68 17 chrX 36086380 36086498 -130563798 + LTR88b LTR Gypsy? 350 473 -364 1 860 238 380 69 74 chrX 36086550 36086752 -130563544 + LTR88b LTR Gypsy? 625 825 -12 1 860 192 213 41 41 chrX 36087883 36087932 -130562364 - MIR SINE MIR -92 170 122 1 860 226 306 122 27 chrX 36087935 36088083 -130562213 + L2a LINE L2 3214 3375 -51 1 860 614 307 138 35 chrX 36088132 36088443 -130561853 - LTR40b LTR ERVL -15 447 105 1 860 279 407 14 0 chrX 36089010 36089150 -130561146 + MIRb SINE MIR 67 208 -60 1 860 343 214 124 0 chrX 36089157 36089246 -130561050 + L2 LINE L2 2743 2842 -577 2 860 4966 62 3 12 chrX 36089268 36089923 -130560373 - L1Md_F2 LINE L1 0 6582 5934 2 860 1100 56 0 0 chrX 36089923 36090067 -130560229 + L1Md_F2 LINE L1 5798 5941 -641 2 860 198 0 0 0 chrX 36090537 36090559 -130559737 + (T)n Simple_repeat Simple_repeat 1 22 0 2 860 3947 173 31 35 chrX 36090906 36091764 -130558532 + RLTR13A LTR ERVK 1 855 0 2 860 277 215 44 122 chrX 36091787 36091877 -130558419 - MER5B DNA MER1_type -16 162 80 2 860 380 320 75 15 chrX 36092038 36092238 -130558058 - L2a LINE L2 -76 3350 3139 2 860 1597 199 128 6 chrX 36092255 36092599 -130557697 - MTD LTR MaLR 0 419 34 2 860 403 368 48 42 chrX 36092647 36092984 -130557312 - L2a LINE L2 -337 3082 2744 2 860 543 16 0 0 chrX 36093165 36093229 -130557067 + (CA)n Simple_repeat Simple_repeat 2 65 0 2 860 1086 96 0 0 chrX 36093232 36093389 -130556907 + (TTTC)n Simple_repeat Simple_repeat 2 158 0 2 860 5266 215 76 9 chrX 36093389 36093770 -130556526 - Lx5 LINE L1 -15 7035 6638 2 860 222 37 0 0 chrX 36093770 36093797 -130556499 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 860 5266 215 76 9 chrX 36093797 36094673 -130555623 - Lx5 LINE L1 -413 6637 5694 2 860 33372 78 11 9 chrX 36094669 36100852 -130549444 - L1_Mus2 LINE L1 -1 6565 416 2 860 3977 128 37 25 chrX 36100848 36100933 -130549363 - L1_Mur3 LINE L1 -1983 3894 3813 2 860 186 43 0 0 chrX 36100933 36100956 -130549340 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 860 3977 128 37 25 chrX 36100956 36101654 -130548642 - L1_Mur3 LINE L1 -2065 3812 3104 2 860 4631 151 43 58 chrX 36101653 36102932 -130547364 - L1_Mur3 LINE L1 -3615 2262 1005 2 860 951 120 69 46 chrX 36102946 36103121 -130547175 - B2_Mm2 SINE B2 -14 181 3 2 860 207 0 0 0 chrX 36103529 36103552 -130546744 + (T)n Simple_repeat Simple_repeat 1 23 0 2 860 264 30 0 0 chrX 36104333 36104366 -130545930 + (GA)n Simple_repeat Simple_repeat 1 33 0 2 860 306 0 0 0 chrX 36105018 36105052 -130545244 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 2 860 903 295 53 15 chrX 36105054 36105316 -130544980 - Lx5 LINE L1 -21 7029 6758 2 860 328 333 35 65 chrX 36105716 36105973 -130544323 - MIRb SINE MIR -16 252 2 2 860 30 0 0 0 chrX 36106104 36106134 -130544162 + AT_rich Low_complexity Low_complexity 1 30 0 2 860 738 253 8 7 chrX 36106504 36106668 -130543628 - ID_B1 SINE B4 -43 249 81 2 860 351 342 9 18 chrX 36107162 36107275 -130543021 - PB1D10 SINE Alu -1 116 5 2 860 459 318 62 36 chrX 36107586 36107811 -130542485 + RMER15 LTR ERVL 340 570 -5 2 860 801 269 105 80 chrX 36108255 36108606 -130541690 + MLT1A0 LTR MaLR 6 365 0 2 860 346 314 16 69 chrX 36108651 36108839 -130541457 + Lx9 LINE L1 7016 7193 -451 2 860 339 168 0 0 chrX 36110035 36110130 -130540166 + (CTAGGG)n Simple_repeat Simple_repeat 6 100 0 2 860 247 237 0 0 chrX 36110203 36110262 -130540034 + (CTAGGG)n Simple_repeat Simple_repeat 1 59 0 2 860 387 0 0 0 chrX 36110443 36110486 -130539810 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 860 333 0 0 0 chrX 36110486 36110522 -130539774 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 860 597 263 50 10 chrX 36110777 36110977 -130539319 - Lx9 LINE L1 -260 7384 7177 2 860 303 202 119 81 chrX 36110974 36111184 -130539112 + Lx9 LINE L1 7425 7642 -2 2 860 795 210 0 0 chrX 36111494 36111670 -130538626 + CT-rich Low_complexity Low_complexity 3 178 0 2 860 288 0 0 0 chrX 36111672 36111704 -130538592 + (TTTC)n Simple_repeat Simple_repeat 1 32 0 2 860 674 250 0 7 chrX 36111704 36111845 -130538451 - RSINE1 SINE B4 -5 160 21 2 860 195 235 59 0 chrX 36112241 36112292 -130538004 + MIRc SINE MIR 6 59 -209 2 860 40 0 0 0 chrX 36112505 36112545 -130537751 + AT_rich Low_complexity Low_complexity 1 40 0 2 860 11597 27 1 4 chrX 36112770 36114878 -130535418 - L1Md_T LINE L1 0 6582 4481 2 860 400 283 0 0 chrX 36114893 36114999 -130535297 + MIR SINE MIR 157 262 0 2 860 184 327 0 0 chrX 36115013 36115068 -130535228 - L2a LINE L2 0 3426 3372 2 860 226 293 30 71 chrX 36115209 36115308 -130534988 + LTR48 LTR ERV1 50 144 -643 2 860 380 328 142 34 chrX 36115322 36115869 -130534427 - L1MC4 LINE L1 -150 7892 7287 2 860 395 383 48 13 chrX 36116325 36116555 -130533741 - L2a LINE L2 -375 3044 2807 2 860 297 329 24 0 chrX 36117029 36117111 -130533185 - B4 SINE B4 -181 111 28 2 860 242 312 149 29 chrX 36117243 36117418 -130532878 + MIRc SINE MIR 60 255 -13 2 860 959 149 0 0 chrX 36117497 36117638 -130532658 - B1_Mur3 SINE Alu -6 143 3 2 860 426 65 0 0 chrX 36117981 36118043 -130532253 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 860 590 245 34 44 chrX 36118231 36118436 -130531860 + Looper DNA PiggyBac 13 215 -1343 2 860 225 0 0 0 chrX 36118446 36118471 -130531825 + (TTA)n Simple_repeat Simple_repeat 1 25 0 2 860 5468 99 25 16 chrX 36118480 36119369 -130530927 - Lx3C LINE L1 -24 6952 6056 2 860 2313 91 3 12 chrX 36119369 36119715 -130530581 + L1_Mur1 LINE L1 4923 5265 -621 2 860 345 313 38 11 chrX 36119720 36119752 -130530544 + Looper DNA PiggyBac 235 266 -1292 2 860 1075 89 0 7 chrX 36119752 36119899 -130530397 - B1_Mus2 SINE Alu -1 146 1 2 860 345 313 38 11 chrX 36119899 36120050 -130530246 + Looper DNA PiggyBac 267 423 -1135 2 860 198 143 0 0 chrX 36120050 36120085 -130530211 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2 860 710 287 70 41 chrX 36120167 36120512 -130529784 + Looper DNA PiggyBac 686 1040 -518 2 860 412 299 52 15 chrX 36120537 36120673 -130529623 + B1F SINE Alu 9 149 0 2 860 263 154 0 15 chrX 36120673 36120739 -130529557 + A-rich Low_complexity Low_complexity 1 65 0 2 860 262 197 12 123 chrX 36120750 36120831 -130529465 + B4 SINE B4 2 73 -219 2 860 8940 20 0 1 chrX 36120842 36121929 -130528367 + L1Md_T LINE L1 4501 5586 -297 2 860 8195 47 0 2 chrX 36121929 36122927 -130527369 + L1Md_T LINE L1 5587 6582 0 2 860 389 319 147 47 chrX 36123321 36123512 -130526784 + B4 SINE B4 82 291 -1 2 860 848 272 58 103 chrX 36123561 36123909 -130526387 + Looper DNA PiggyBac 1047 1378 -180 2 860 1021 119 0 27 chrX 36123961 36124108 -130526188 - B1_Mus1 SINE Alu -5 143 1 2 860 1097 101 0 12 chrX 36124141 36124312 -130525984 + (TCCC)n Simple_repeat Simple_repeat 2 170 0 2 860 306 0 0 0 chrX 36124938 36124972 -130525324 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 860 421 274 342 6 chrX 36125881 36126200 -130524096 - LTR16A LTR ERVL -10 441 16 2 860 713 212 7 7 chrX 36126706 36126858 -130523438 - Lx6 LINE L1 -300 7160 7009 2 860 245 299 129 11 chrX 36126927 36127049 -130523247 - B4 SINE B4 -155 137 1 2 860 245 246 0 0 chrX 36127080 36127145 -130523151 + CT-rich Low_complexity Low_complexity 1 65 0 2 860 408 267 167 0 chrX 36127328 36127448 -130522848 + B1_Mur2 SINE Alu 2 141 -8 2 860 303 93 0 0 chrX 36127451 36127494 -130522802 + (CAG)n Simple_repeat Simple_repeat 2 44 0 2 860 31 0 0 0 chrX 36127829 36127860 -130522436 + AT_rich Low_complexity Low_complexity 1 31 0 2 860 2171 239 75 15 chrX 36128093 36128689 -130521607 + Lx6 LINE L1 6825 7456 -4 2 860 584 260 40 52 chrX 36128683 36128931 -130521365 - Lx7 LINE L1 -1781 5915 5671 2 860 296 378 60 0 chrX 36129025 36129176 -130521120 + MIRb SINE MIR 75 234 -34 2 860 543 286 86 6 chrX 36129244 36129406 -130520890 + MIRc SINE MIR 70 244 -24 2 860 1012 72 0 14 chrX 36129660 36129800 -130520496 + B1_Mus1 SINE Alu 2 139 -9 2 860 360 0 0 0 chrX 36129821 36129861 -130520435 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 2 860 685 277 23 0 chrX 36130464 36130641 -130519655 - B3A SINE B2 -17 181 1 2 860 320 253 165 0 chrX 36131203 36131294 -130519002 - PB1D10 SINE Alu -7 110 5 2 860 314 195 13 0 chrX 36131757 36131834 -130518462 + CT-rich Low_complexity Low_complexity 4 81 0 2 860 252 339 91 87 chrX 36132097 36132402 -130517894 + MER34A1 LTR ERV1 175 498 -89 2 860 3806 120 9 9 chrX 36132402 36132980 -130517316 - Lx LINE L1 -3 6651 6074 2 860 252 337 91 88 chrX 36132980 36133050 -130517246 + MER34A1 LTR ERV1 499 566 -21 2 860 643 290 20 25 chrX 36133153 36133351 -130516945 - B3A SINE B2 0 198 2 2 860 1022 53 13 26 chrX 36133412 36133566 -130516730 + L1_Mus3 LINE L1 6482 6633 -5 2 860 21 0 0 0 chrX 36133568 36133589 -130516707 + AT_rich Low_complexity Low_complexity 1 21 0 2 860 249 369 98 27 chrX 36133762 36133946 -130516350 - MIR SINE MIR -31 231 35 2 860 325 194 0 15 chrX 36134053 36134121 -130516175 + MLT1E1A LTR MaLR 614 680 0 2 860 205 272 21 52 chrX 36134318 36134415 -130515881 - MIRc SINE MIR -50 218 125 2 860 647 261 84 0 chrX 36135805 36136147 -130514149 - L1MA4 LINE L1 -353 5938 5532 2 860 762 271 7 15 chrX 36136487 36136700 -130513596 - B3A SINE B2 -11 205 1 2 860 483 281 15 96 chrX 36136743 36136940 -130513356 + Lx8 LINE L1 7172 7352 -121 2 860 432 0 0 0 chrX 36137069 36137117 -130513179 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 860 200 184 0 26 chrX 36137280 36137319 -130512977 + MIRc SINE MIR 116 153 -115 2 860 32409 35 13 12 chrX 36137321 36142214 -130508082 + L1Md_Gf LINE L1 1 4929 -957 2 860 236 191 44 73 chrX 36142214 36142282 -130508014 - RMER20A LTR ERVK -265 251 186 2 860 32409 35 13 12 chrX 36142282 36142936 -130507360 + L1Md_Gf LINE L1 4930 5589 -297 2 860 8996 6 0 0 chrX 36142936 36143932 -130506364 + L1Md_T LINE L1 5587 6582 0 2 860 2129 87 3 23 chrX 36144170 36144475 -130505821 - L1_Mus1 LINE L1 -6 6561 6263 2 860 378 0 0 0 chrX 36144604 36144646 -130505650 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 860 186 43 0 0 chrX 36144646 36144668 -130505628 + (CG)n Simple_repeat Simple_repeat 1 23 0 2 860 758 163 2 4 chrX 36145168 36145313 -130504983 - B1_Mur3 SINE Alu -7 143 1 2 860 1615 42 0 0 chrX 36145373 36145563 -130504733 - B2_Mm1t SINE B2 -2 191 2 2 860 618 266 0 0 chrX 36145649 36145777 -130504519 - B1_Mur1 SINE Alu -20 129 2 2 860 1180 49 18 0 chrX 36145859 36146022 -130504274 + (TTCTC)n Simple_repeat Simple_repeat 5 170 0 2 860 208 178 0 43 chrX 36146023 36146070 -130504226 + CT-rich Low_complexity Low_complexity 5 49 0 2 860 298 278 30 142 chrX 36146073 36146207 -130504089 - PB1D7 SINE Alu 0 120 2 2 860 184 191 106 0 chrX 36147085 36147132 -130503164 - MIRc SINE MIR -118 150 99 2 860 787 312 5 5 chrX 36148322 36148538 -130501758 + B3 SINE B2 1 216 0 2 860 842 241 34 15 chrX 36148672 36148878 -130501418 + B3 SINE B2 3 212 -4 3 860 365 224 102 26 chrX 36148982 36149114 -130501182 + MIRb SINE MIR 14 160 -116 3 860 936 332 69 60 chrX 36150500 36150807 -130499489 + MLT1F2 LTR MaLR 1 308 -252 3 860 360 0 0 0 chrX 36150807 36150847 -130499449 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 860 936 332 69 60 chrX 36150847 36150869 -130499427 + MLT1F2 LTR MaLR 309 326 -234 3 860 3777 110 15 0 chrX 36150869 36151415 -130498881 - Lx LINE L1 -12 6642 6089 3 860 936 332 69 60 chrX 36151415 36151635 -130498661 + MLT1F2 LTR MaLR 327 556 -4 3 860 276 276 244 0 chrX 36151739 36151866 -130498430 - MIRb SINE MIR -14 254 97 3 860 282 116 0 0 chrX 36152145 36152188 -130498108 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 860 750 257 70 48 chrX 36152193 36152463 -130497833 - B4A SINE B4 -14 278 3 3 860 369 0 0 0 chrX 36152706 36152747 -130497549 + (TTA)n Simple_repeat Simple_repeat 2 42 0 3 860 222 340 186 28 chrX 36153291 36153436 -130496860 - MIRc SINE MIR -83 185 18 3 860 189 74 0 0 chrX 36155169 36155196 -130495100 + (T)n Simple_repeat Simple_repeat 1 27 0 3 860 1229 315 14 33 chrX 36155529 36156018 -130494278 - Lx9 LINE L1 -267 7377 6898 3 860 222 286 36 0 chrX 36156402 36156458 -130493838 - MER5A DNA MER1_type -130 59 2 3 860 26172 18 4 9 chrX 36156527 36160736 -130489560 - L1Md_A LINE L1 -1485 4398 215 3 860 558 297 58 30 chrX 36160893 36161290 -130489006 - L1MA4 LINE L1 -280 6017 5576 3 860 222 404 20 0 chrX 36162125 36162224 -130488072 + MIRm SINE MIR 1 101 -175 3 860 1022 138 0 6 chrX 36163082 36163137 -130487159 + (TTC)n Simple_repeat Simple_repeat 1 55 0 3 860 1494 33 0 0 chrX 36163137 36163317 -130486979 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 3 860 1022 138 0 6 chrX 36163317 36163436 -130486860 + (TTC)n Simple_repeat Simple_repeat 2 120 0 3 860 260 137 20 0 chrX 36163861 36163912 -130486384 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 860 1313 266 57 0 chrX 36163940 36164274 -130486022 - MTE2b LTR MaLR -24 355 3 3 860 573 15 0 0 chrX 36164331 36164397 -130485899 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 860 2331 53 3 16 chrX 36164974 36165281 -130485015 - L1Md_F2 LINE L1 -13 6569 6267 3 860 554 279 22 13 chrX 36165286 36165515 -130484781 - L1MA7 LINE L1 0 6291 6061 3 860 786 189 178 0 chrX 36165590 36165781 -130484515 - URR1B DNA MER1_type 0 225 1 3 860 602 110 0 0 chrX 36166561 36166652 -130483644 - L1_Mus3 LINE L1 -236 6330 6240 3 860 569 111 0 0 chrX 36166652 36166733 -130483563 + L1_Mus3 LINE L1 6374 6454 -184 3 860 22 0 0 0 chrX 36166752 36166774 -130483522 + AT_rich Low_complexity Low_complexity 1 22 0 3 860 366 234 52 0 chrX 36167031 36167108 -130483188 - ID4 SINE ID -1 82 2 3 860 1233 250 4 4 chrX 36167227 36167480 -130482816 - LTR75 LTR ERVL -29 533 281 3 860 21 71 0 0 chrX 36167498 36167540 -130482756 + AT_rich Low_complexity Low_complexity 1 42 0 3 860 2403 54 0 3 chrX 36167719 36168018 -130482278 + L1_Mus1 LINE L1 6266 6563 -4 3 860 715 297 30 108 chrX 36168537 36169007 -130481289 + MTD LTR MaLR 1 405 -14 3 860 338 253 13 0 chrX 36169012 36169087 -130481209 - ID4_ SINE ID -7 76 1 3 860 301 311 54 73 chrX 36169167 36169372 -130480924 - L2a LINE L2 0 3426 3226 3 860 22 88 0 0 chrX 36169732 36169789 -130480507 + AT_rich Low_complexity Low_complexity 1 57 0 3 860 983 132 29 23 chrX 36171589 36171760 -130478536 - URR1A DNA MER1_type 0 226 55 3 860 4422 93 0 2 chrX 36171778 36172378 -130477918 - L1_Mus4 LINE L1 -1 6635 6037 3 860 2676 85 13 0 chrX 36172378 36172768 -130477528 + L1_Mus4 LINE L1 5642 6036 -600 3 860 7631 58 2 11 chrX 36173246 36174316 -130475980 - L1Md_F2 LINE L1 0 6582 5574 3 860 183 217 24 12 chrX 36174764 36174795 -130475501 + polypyrimidine Low_complexity Low_complexity 58 88 0 3 860 2377 114 3 75 chrX 36174795 36175182 -130475114 - RLTR10D LTR ERVK 0 359 1 3 860 183 217 24 12 chrX 36175182 36175234 -130475062 + CT-rich Low_complexity Low_complexity 5 57 0 3 860 886 283 27 36 chrX 36175425 36175842 -130474454 + L1MA9 LINE L1 5324 5735 -556 3 861 537 260 101 31 chrX 36175951 36175995 -130474301 + L1MA9 LINE L1 5735 5785 -506 3 861 486 0 0 0 chrX 36175995 36176049 -130474247 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 3 861 565 235 91 19 chrX 36176049 36176301 -130473995 + L1MA9 LINE L1 5786 6056 -256 3 861 33 25 0 0 chrX 36176398 36176438 -130473858 + AT_rich Low_complexity Low_complexity 1 40 0 3 861 1284 102 0 16 chrX 36176811 36177001 -130473295 - B2_Mm2 SINE B2 -6 189 3 3 861 1383 74 16 10 chrX 36178188 36178380 -130471916 - B2_Mm2 SINE B2 -2 193 1 3 861 376 301 39 0 chrX 36178458 36178561 -130471735 - B1F SINE Alu -11 138 32 3 861 199 259 18 18 chrX 36178579 36178634 -130471662 + L2a LINE L2 3286 3340 -86 3 861 2824 41 8 57 chrX 36178647 36179034 -130471262 - L1Md_A LINE L1 0 6582 6215 3 861 241 122 0 0 chrX 36179043 36179092 -130471204 - B2_Mm1t SINE B2 -7 186 138 3 861 331 140 8 34 chrX 36179082 36179148 -130471148 - B2_Mm2 SINE B2 -102 114 47 3 861 1195 114 11 0 chrX 36179204 36179380 -130470916 - B2_Mm1t SINE B2 -13 180 3 3 861 936 320 21 49 chrX 36179788 36180074 -130470222 - B4A SINE B4 -14 278 1 3 861 282 253 143 71 chrX 36180112 36180210 -130470086 - PB1D10 SINE Alu -11 106 1 3 861 748 280 34 57 chrX 36181801 36182066 -130468230 + MLT2C2 LTR ERVL 1 259 -205 3 861 3259 58 0 12 chrX 36183129 36183534 -130466762 + MTB LTR MaLR 1 400 0 3 861 470 258 192 8 chrX 36183537 36183741 -130466555 - MIR SINE MIR -10 258 2 3 861 7232 141 14 3 chrX 36184083 36186108 -130464188 - Lx LINE L1 -8 6646 4601 3 861 22474 122 6 39 chrX 36186160 36192835 -130457461 - L1Md_F2 LINE L1 -1 6584 422 3 861 2694 154 57 9 chrX 36192832 36193362 -130456934 - MusHAL1 LINE L1 -2794 560 6 3 861 21 0 0 0 chrX 36194200 36194221 -130456075 + AT_rich Low_complexity Low_complexity 1 21 0 3 861 520 294 67 78 chrX 36194227 36194716 -130455580 - L1MB1 LINE L1 -279 5910 5451 3 861 252 246 81 14 chrX 36194716 36194790 -130455506 - ID4_ SINE ID -3 80 2 3 861 480 300 79 71 chrX 36194790 36194884 -130455412 - L1MB1 LINE L1 -841 5450 5371 3 861 246 98 0 32 chrX 36194966 36195029 -130455267 + Lx7 LINE L1 7514 7574 -122 3 861 35161 68 10 17 chrX 36195028 36201267 -130449029 - L1Md_F3 LINE L1 -1 6583 396 3 861 21 0 0 0 chrX 36201305 36201326 -130448970 + AT_rich Low_complexity Low_complexity 1 21 0 3 861 429 225 76 29 chrX 36201544 36201649 -130448647 - PB1D10 SINE Alu 0 117 8 3 861 354 366 39 5 chrX 36201935 36202141 -130448155 - MIR SINE MIR -21 241 29 3 861 7849 137 17 10 chrX 36202276 36202547 -130447749 - Lx4A LINE L1 0 7058 6789 3 861 3215 24 39 3 chrX 36202547 36202929 -130447367 - MTA_Mm LTR MaLR 0 396 1 3 861 9136 35 3 2 chrX 36202931 36204026 -130446270 - MTA_Mm-int LTR MaLR -2 1096 1 3 861 3215 24 39 3 chrX 36204026 36204408 -130445888 - MTA_Mm LTR MaLR 0 396 1 3 861 7849 137 17 10 chrX 36204408 36205377 -130444919 - Lx4A LINE L1 -270 6788 5806 3 861 6718 86 17 9 chrX 36205377 36207081 -130443215 - L1Md_F2 LINE L1 -12 6570 4907 3 861 23579 110 44 5 chrX 36207079 36211400 -130438896 - L1Md_F3 LINE L1 -14 6570 2050 3 861 369 43 0 0 chrX 36211400 36211447 -130438849 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 861 23579 129 82 8 chrX 36211447 36212831 -130437465 - L1Md_F3 LINE L1 -3828 2049 571 3 861 1280 257 27 86 chrX 36213429 36213531 -130436765 - ORR1E LTR MaLR -10 349 255 3 861 877 239 69 124 chrX 36213531 36213909 -130436387 - ORR1E LTR MaLR -2 357 1 3 861 1280 257 27 86 chrX 36213909 36214177 -130436119 - ORR1E LTR MaLR -105 254 1 3 861 1484 269 105 23 chrX 36214297 36214909 -130435387 - Lx8 LINE L1 -31 7442 6781 3 861 349 283 28 19 chrX 36214897 36215005 -130435291 - Lx8 LINE L1 -830 6643 6535 3 861 560 176 49 9 chrX 36215007 36215177 -130435119 - B2_Mm1t SINE B2 0 195 14 3 861 3433 70 0 2 chrX 36215177 36215622 -130434674 - L1_Mus1 LINE L1 -8 6559 6116 3 861 1176 276 22 13 chrX 36215635 36216048 -130434248 - Lx8 LINE L1 -995 6649 6174 3 861 6935 71 20 8 chrX 36218041 36218982 -130431314 + Lx3_Mus LINE L1 6058 7009 0 3 861 303 28 0 0 chrX 36218983 36219019 -130431277 + (TAAAAA)n Simple_repeat Simple_repeat 3 38 0 3 861 267 31 0 0 chrX 36219036 36219068 -130431228 + (CCAA)n Simple_repeat Simple_repeat 2 33 0 3 861 423 0 0 0 chrX 36219103 36219150 -130431146 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 861 192 77 0 0 chrX 36219150 36219176 -130431120 + (TA)n Simple_repeat Simple_repeat 1 26 0 3 861 266 401 78 65 chrX 36219326 36219787 -130430509 - L2c LINE L2 -2 3385 2919 3 861 215 31 0 30 chrX 36220301 36220334 -130429962 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3 861 570 274 7 7 chrX 36220344 36220480 -130429816 - ID_B1 SINE B4 -2 222 87 3 861 180 383 42 0 chrX 36220800 36220920 -130429376 + MIRc SINE MIR 17 141 -127 3 861 231 303 52 52 chrX 36221564 36221679 -130428617 + MER117 DNA MER1_type 11 125 -72 3 861 234 202 35 35 chrX 36222133 36222307 -130427989 + GA-rich Low_complexity Low_complexity 2 175 0 3 861 834 177 209 5 chrX 36222440 36222627 -130427669 + URR1B DNA MER1_type 1 225 0 3 861 1234 306 64 44 chrX 36222628 36223127 -130427169 - MT2A LTR ERVL -17 516 8 3 861 327 294 0 45 chrX 36223125 36223214 -130427082 - B4 SINE B4 -81 211 127 3 861 2564 266 75 108 chrX 36223279 36223774 -130426522 - Lx8 LINE L1 -2 7471 7047 3 861 3256 42 0 7 chrX 36223774 36224177 -130426119 - L1Md_F2 LINE L1 -14 6568 6169 3 861 2564 266 75 108 chrX 36224177 36224969 -130425327 - Lx8 LINE L1 -427 7046 6227 3 861 2910 257 23 35 chrX 36225044 36226114 -130424182 + L1_Mur3 LINE L1 2119 3176 -2704 3 861 23 68 0 0 chrX 36226114 36226158 -130424138 + AT_rich Low_complexity Low_complexity 1 44 0 3 861 582 233 43 10 chrX 36226158 36226366 -130423930 - Lx9 LINE L1 -5 7639 7425 3 861 1931 277 20 55 chrX 36226474 36227074 -130423222 - Lx5 LINE L1 -17 7033 6455 3 861 324 233 39 8 chrX 36227095 36227225 -130423071 + L1_Mur3 LINE L1 3189 3322 -2558 3 861 21 82 0 0 chrX 36227595 36227644 -130422652 + AT_rich Low_complexity Low_complexity 1 49 0 3 861 184 277 0 21 chrX 36227838 36227886 -130422410 + MIRm SINE MIR 208 254 -22 3 861 270 0 0 0 chrX 36228519 36228549 -130421747 + (CCTA)n Simple_repeat Simple_repeat 4 33 0 4 861 342 0 0 0 chrX 36228553 36228591 -130421705 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 861 858 291 73 39 chrX 36228594 36228869 -130421427 - L1MA4 LINE L1 -366 5934 5640 4 861 429 20 0 0 chrX 36228869 36228919 -130421377 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 861 858 297 77 37 chrX 36228919 36229389 -130420907 - L1MA4 LINE L1 -661 5639 5084 4 861 21 0 0 0 chrX 36229564 36229585 -130420711 + AT_rich Low_complexity Low_complexity 1 21 0 4 861 850 174 0 0 chrX 36230218 36230356 -130419940 + B1_Mus1 SINE Alu 1 138 -10 4 861 231 36 0 0 chrX 36230356 36230384 -130419912 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 861 22 56 0 0 chrX 36230707 36230743 -130419553 + AT_rich Low_complexity Low_complexity 1 36 0 4 861 447 254 26 17 chrX 36232495 36232611 -130417685 + PB1D10 SINE Alu 1 117 0 4 861 234 0 0 0 chrX 36232677 36232703 -130417593 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 861 204 389 56 28 chrX 36233126 36233269 -130417027 + MIR3 SINE MIR 38 184 -24 4 861 822 186 14 0 chrX 36233739 36233884 -130416412 - B1_Mus2 SINE Alu 0 147 1 4 861 557 226 79 21 chrX 36234746 36234886 -130415410 + B1F SINE Alu 1 148 -1 4 861 315 0 0 0 chrX 36235028 36235063 -130415233 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 861 396 71 0 0 chrX 36235556 36235612 -130414684 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 861 565 244 40 8 chrX 36235616 36235740 -130414556 - RSINE1 SINE B4 -33 132 5 4 861 261 197 30 0 chrX 36235744 36235810 -130414486 - L1M3e LINE L1 -3955 3148 3081 4 861 1103 84 0 0 chrX 36236080 36236223 -130414073 - B1_Mus1 SINE Alu -5 143 1 4 861 896 222 60 0 chrX 36236500 36236685 -130413611 + B3 SINE B2 5 200 -16 4 861 4972 85 94 97 chrX 36236685 36237581 -130412715 - RLTR13B1 LTR ERVK 0 893 1 4 861 796 246 20 35 chrX 36237622 36237824 -130412472 - B3 SINE B2 0 216 18 4 861 2361 130 6 0 chrX 36238228 36238589 -130411707 - Lx5 LINE L1 -225 6825 6463 4 861 969 106 0 0 chrX 36238586 36238728 -130411568 + Lx5 LINE L1 6431 6572 -478 4 861 416 293 110 34 chrX 36238812 36239545 -130410751 - L1M3e LINE L1 -4691 2346 1549 4 861 219 103 0 0 chrX 36239758 36239797 -130410499 + (T)n Simple_repeat Simple_repeat 1 39 0 4 861 189 368 37 28 chrX 36240295 36240404 -130409892 + MIR3 SINE MIR 50 159 -49 4 861 977 240 24 14 chrX 36240676 36240883 -130409413 + B3 SINE B2 2 210 -6 4 861 243 0 0 0 chrX 36241087 36241114 -130409182 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 861 205 348 104 31 chrX 36241195 36241358 -130408938 - MER5B DNA MER1_type 0 178 4 4 861 393 22 0 0 chrX 36242123 36242169 -130408127 + (TTTTA)n Simple_repeat Simple_repeat 4 49 0 4 861 1149 45 0 0 chrX 36242169 36242303 -130407993 - B1_Mus2 SINE Alu -11 136 3 4 861 3732 230 28 90 chrX 36242465 36242944 -130407352 - Lx6 LINE L1 -31 7429 6994 4 861 3280 64 2 2 chrX 36242944 36243365 -130406931 - L1_Mus1 LINE L1 -4 6563 6143 4 861 3732 230 28 90 chrX 36243365 36243957 -130406339 - Lx6 LINE L1 -467 6993 6424 4 861 2291 239 35 18 chrX 36243958 36244610 -130405686 - Lx7 LINE L1 -1447 6249 5587 4 861 31957 98 18 12 chrX 36244611 36250930 -130399366 - L1Md_F2 LINE L1 -12 6570 230 4 861 431 171 0 0 chrX 36250943 36251013 -130399283 - Lx7 LINE L1 -281 5599 5530 4 861 540 251 130 36 chrX 36251005 36251336 -130398960 - L1MA8 LINE L1 -316 5975 5614 4 861 1026 98 0 0 chrX 36251844 36251997 -130398299 + (TTTC)n Simple_repeat Simple_repeat 2 154 0 4 861 290 250 96 14 chrX 36252958 36253031 -130397265 + RSINE1 SINE B4 68 146 -19 4 861 23 33 0 0 chrX 36253152 36253182 -130397114 + AT_rich Low_complexity Low_complexity 1 30 0 4 861 568 319 39 30 chrX 36254059 36254292 -130396004 - Lx8 LINE L1 -23 7450 7216 4 861 747 9 54 0 chrX 36255167 36255279 -130395017 + (TC)n Simple_repeat Simple_repeat 1 118 0 4 861 966 181 0 0 chrX 36255282 36255442 -130394854 - B2_Mm2 SINE B2 -35 160 1 4 861 315 0 0 0 chrX 36256358 36256393 -130393903 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 861 450 0 0 0 chrX 36256394 36256444 -130393852 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 861 2244 294 57 62 chrX 36256649 36257475 -130392821 - MTE-int LTR MaLR -182 1398 577 4 861 21 0 0 0 chrX 36257518 36257539 -130392757 + AT_rich Low_complexity Low_complexity 1 21 0 4 861 249 296 0 0 chrX 36257589 36257660 -130392636 + (TA)n Simple_repeat Simple_repeat 1 71 0 4 861 1110 119 38 0 chrX 36257664 36257824 -130392472 - B2_Mm2 SINE B2 -29 166 1 4 861 828 98 0 0 chrX 36257983 36258105 -130392191 - B1_Mus1 SINE Alu 0 148 27 4 861 2668 206 60 9 chrX 36261345 36261481 -130388815 - Lx9 LINE L1 0 7644 7476 4 861 360 0 0 0 chrX 36261481 36261521 -130388775 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 861 2668 206 60 9 chrX 36261521 36262013 -130388283 - Lx9 LINE L1 -169 7475 6984 4 861 344 257 40 0 chrX 36262181 36262255 -130388041 - PB1 SINE Alu -20 107 31 4 861 743 283 91 14 chrX 36262353 36263066 -130387230 + L1MA4 LINE L1 4975 5749 -548 4 861 887 253 133 30 chrX 36263066 36263367 -130386929 - MTD LTR MaLR 0 419 88 4 861 497 229 25 89 chrX 36263539 36263697 -130386599 + L1MA4 LINE L1 5800 5947 -365 4 861 321 321 28 78 chrX 36264299 36264441 -130385855 - MIRc SINE MIR -104 164 30 4 861 343 286 83 0 chrX 36265465 36265549 -130384747 + RSINE1 SINE B4 47 137 -28 4 861 216 0 0 0 chrX 36265561 36265585 -130384711 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 4 861 540 294 108 29 chrX 36265639 36265916 -130384380 - MLT-int LTR MaLR -55 1680 1382 4 861 336 375 10 0 chrX 36265967 36266071 -130384225 - MLT-int LTR MaLR -457 1278 1174 4 861 283 268 127 0 chrX 36266714 36266785 -130383511 + RSINE1 SINE B4 2 81 -84 4 861 265 322 122 0 chrX 36266785 36266804 -130383492 + B3 SINE B2 1 101 -115 4 861 237 297 103 0 chrX 36267062 36267217 -130383079 + L1MDa LINE L1 1395 1565 -5068 4 861 1211 253 68 58 chrX 36267242 36267653 -130382643 - BGLII_B LTR ERVK -21 420 6 4 861 715 297 66 13 chrX 36267660 36267964 -130382332 + L1MDa LINE L1 1568 1887 -4746 4 861 1027 256 43 135 chrX 36267991 36268547 -130381749 + Lx7 LINE L1 6911 7415 -281 4 861 180 0 0 0 chrX 36268557 36268577 -130381719 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 861 491 259 28 36 chrX 36268700 36268948 -130381348 + L1MDa LINE L1 1914 2159 -4474 4 861 258 235 99 42 chrX 36269214 36269285 -130381011 + ID4_ SINE ID 9 83 0 4 861 347 456 41 18 chrX 36269868 36270087 -130380209 + L1M4b LINE L1 321 544 -6790 4 861 2547 174 27 2 chrX 36270117 36270602 -130379694 - RMER1A Other Other -131 899 403 4 861 453 127 0 14 chrX 36270711 36270783 -130379513 + MTE2a LTR MaLR 309 379 0 4 861 562 154 8 8 chrX 36270807 36270938 -130379358 + CT-rich Low_complexity Low_complexity 1 131 0 4 861 982 261 135 39 chrX 36270968 36271427 -130378869 + L1M4b LINE L1 986 1488 -5846 4 861 401 233 56 40 chrX 36271845 36271970 -130378326 + B3 SINE B2 85 211 -5 4 861 201 184 0 20 chrX 36272075 36272125 -130378171 + A-rich Low_complexity Low_complexity 2 50 0 4 861 816 120 16 97 chrX 36272147 36272332 -130377964 + Lx3A LINE L1 6804 6973 -8 4 861 4645 45 5 3 chrX 36272514 36273092 -130377204 - L1Md_F2 LINE L1 0 6582 6004 4 861 269 349 36 9 chrX 36273249 36273359 -130376937 - MIR3 SINE MIR -51 157 45 4 861 181 384 47 0 chrX 36273578 36273664 -130376632 - MIRb SINE MIR -69 199 110 4 861 441 0 0 0 chrX 36274038 36274087 -130376209 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 861 353 282 14 127 chrX 36274232 36274279 -130376017 - MER2 DNA MER2_type -47 298 260 4 861 740 257 67 29 chrX 36274279 36274487 -130375809 - B3 SINE B2 0 216 1 4 861 693 233 18 7 chrX 36274487 36274661 -130375635 - MER2 DNA MER2_type -86 259 92 4 861 382 191 0 116 chrX 36274679 36274774 -130375522 - BC1_Mm scRNA scRNA -63 89 6 4 861 259 318 0 0 chrX 36274788 36274851 -130375445 - MER2 DNA MER2_type -272 73 11 4 861 4383 122 18 5 chrX 36275582 36276242 -130374054 + Lx LINE L1 5986 6654 0 4 861 23 33 0 0 chrX 36276372 36276402 -130373894 + AT_rich Low_complexity Low_complexity 1 30 0 4 861 294 29 0 0 chrX 36276402 36276437 -130373859 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 861 550 293 38 0 chrX 36276437 36276570 -130373726 - RSINE1 SINE B4 -25 140 3 4 861 898 323 35 4 chrX 36276570 36276793 -130373503 - B4A SINE B4 -62 230 1 4 861 254 315 26 20 chrX 36276912 36277064 -130373232 + L1MA8 LINE L1 6133 6285 -6 4 861 274 224 0 26 chrX 36277437 36277515 -130372781 - Lx7 LINE L1 -18 7678 7603 4 861 515 348 94 43 chrX 36277560 36278059 -130372237 + L2a LINE L2 2871 3418 -8 4 861 4344 86 29 38 chrX 36278060 36278716 -130371580 - L1Md_F2 LINE L1 0 6582 5933 4 861 12479 83 129 2 chrX 36278743 36281553 -130368743 - L1Md_F2 LINE L1 -12 6570 3346 4 861 217 333 84 15 chrX 36281593 36281724 -130368572 + MIRb SINE MIR 120 259 -9 4 861 1525 82 29 0 chrX 36282145 36282353 -130367943 - L1_Mus1 LINE L1 0 6567 6354 4 861 3537 83 12 18 chrX 36282678 36283171 -130367125 + L1Md_F2 LINE L1 6091 6580 -2 4 861 206 211 0 0 chrX 36283233 36283271 -130367025 + CT-rich Low_complexity Low_complexity 2 39 0 4 861 30812 87 3 5 chrX 36283490 36288655 -130361641 + L1Md_F2 LINE L1 217 5586 -297 4 861 7586 68 1 3 chrX 36288656 36289642 -130360654 + L1Md_F2 LINE L1 5588 6571 -11 4 861 198 0 0 0 chrX 36289645 36289667 -130360629 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 4 861 410 283 107 8 chrX 36290035 36290156 -130360140 - LTR41 LTR ERVL -578 190 58 4 861 1074 85 0 0 chrX 36290476 36290617 -130359679 + B1_Mus1 SINE Alu 2 142 -6 4 861 325 81 16 16 chrX 36290623 36290686 -130359610 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 4 861 213 238 0 70 chrX 36290705 36290791 -130359505 + (CATATA)n Simple_repeat Simple_repeat 3 82 0 4 861 1994 140 19 0 chrX 36291370 36291678 -130358618 - ORR1A2 LTR MaLR -8 319 6 4 861 240 303 127 32 chrX 36291793 36291919 -130358377 + MIRb SINE MIR 117 254 -14 4 861 665 319 38 59 chrX 36294033 36294353 -130355943 + ORR1E LTR MaLR 1 313 -46 5 861 373 55 0 0 chrX 36294396 36294451 -130355845 - L1_Mus2 LINE L1 0 6566 6512 5 861 5460 79 5 56 chrX 36294453 36295255 -130355041 - L1_Mus2 LINE L1 0 6566 5806 5 861 656 238 132 5 chrX 36295416 36295606 -130354690 + B3 SINE B2 3 216 0 5 861 273 29 0 0 chrX 36295710 36295744 -130354552 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 5 861 809 298 45 4 chrX 36295791 36296034 -130354262 - Tigger5 DNA MER2_type -2153 253 1 5 861 346 20 0 38 chrX 36296284 36296337 -130353959 + (CAAAA)n Simple_repeat Simple_repeat 3 53 0 5 861 35054 69 8 16 chrX 36296803 36302997 -130347299 - L1Md_F2 LINE L1 -13 6569 217 5 861 4238 158 19 52 chrX 36302998 36304410 -130345886 - L1Md_F LINE L1 -4290 1593 215 5 861 1088 280 54 25 chrX 36304422 36304468 -130345828 - L1MA7 LINE L1 -463 5828 5782 5 861 297 128 0 0 chrX 36304468 36304515 -130345781 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 861 1088 280 54 25 chrX 36304515 36304997 -130345299 - L1MA7 LINE L1 -510 5781 5228 5 861 2274 75 134 0 chrX 36304997 36305317 -130344979 - L1_Mus1 LINE L1 0 6567 6205 5 861 1011 302 21 23 chrX 36305317 36305580 -130344716 - L1MA7 LINE L1 -620 5227 4976 5 861 214 311 0 0 chrX 36305590 36305651 -130344645 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 861 1667 184 50 77 chrX 36305676 36306052 -130344244 + ORR1D1 LTR MaLR 1 366 -8 5 861 494 370 90 8 chrX 36306043 36306288 -130344008 - B4 SINE B4 -27 265 1 5 861 25 31 0 0 chrX 36306292 36306324 -130343972 + AT_rich Low_complexity Low_complexity 1 32 0 5 107 6342 70 8 0 chrX 36306324 36307191 -130343105 - L1_Mus1 LINE L1 0 6567 5694 5 862 550 316 4 0 chrX 36307199 36307436 -130342860 - L1_Mur2 LINE L1 -892 4985 4748 5 862 540 42 0 0 chrX 36309351 36309422 -130340874 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 5 862 262 376 0 0 chrX 36309471 36309556 -130340740 - MER90 LTR ERV1 0 575 491 5 862 448 321 0 0 chrX 36311375 36311509 -130338787 + (TTAGGC)n Simple_repeat Simple_repeat 5 138 0 5 862 1354 296 89 50 chrX 36313437 36314801 -130335495 - L1M2 LINE L1 -705 5595 4172 5 862 219 238 0 0 chrX 36315026 36315068 -130335228 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 862 27 49 0 0 chrX 36315513 36315554 -130334742 + AT_rich Low_complexity Low_complexity 1 41 0 5 862 393 39 0 0 chrX 36316031 36316082 -130334214 + (TTA)n Simple_repeat Simple_repeat 2 52 0 5 862 3289 209 21 7 chrX 36316116 36316898 -130333398 - Lx2B LINE L1 -64 6994 6106 5 862 1855 148 242 36 chrX 36316898 36317369 -130332927 - RLTR6_Mm LTR ERV1 -50 604 37 5 862 657 127 0 14 chrX 36317477 36317620 -130332676 - Lx2B LINE L1 -981 6077 5942 5 862 478 274 8 0 chrX 36317637 36317754 -130332542 + MER5A DNA MER1_type 72 189 0 5 862 995 252 29 32 chrX 36318608 36318854 -130331442 + B4 SINE B4 2 246 -46 5 862 748 233 0 0 chrX 36320131 36320277 -130330019 - B1_Mus2 SINE Alu -1 146 1 5 862 444 375 37 16 chrX 36320436 36320623 -130329673 - B4A SINE B4 -2 290 100 5 862 33 43 0 0 chrX 36320716 36320763 -130329533 + AT_rich Low_complexity Low_complexity 1 47 0 5 862 1901 82 0 8 chrX 36320946 36321203 -130329093 - L1Md_F2 LINE L1 -12 6570 6316 5 862 269 140 0 0 chrX 36321404 36321454 -130328842 - MT2A LTR ERVL 0 533 484 5 862 510 341 90 18 chrX 36321456 36321623 -130328673 - B3A SINE B2 -16 182 4 5 862 249 191 21 21 chrX 36321665 36321713 -130328583 - B1F SINE Alu -87 62 15 5 862 779 324 21 12 chrX 36321929 36322170 -130328126 - Tigger5 DNA MER2_type -2163 243 1 5 862 965 304 49 6 chrX 36322469 36322956 -130327340 + L1MA4 LINE L1 5254 5761 -542 5 862 441 228 41 15 chrX 36323405 36323571 -130326725 + L1MA4 LINE L1 5738 5907 -393 5 862 570 98 0 0 chrX 36323843 36323925 -130326371 + (GGGA)n Simple_repeat Simple_repeat 4 85 0 5 862 2763 333 42 25 chrX 36324300 36325890 -130324406 - RodERV21-int LTR ERV1 -203 4788 3172 5 862 433 318 50 71 chrX 36325936 36326318 -130323978 - RodERV21-int LTR ERV1 -1900 3091 2718 5 862 273 296 0 0 chrX 36326661 36326759 -130323537 - RodERV21-int LTR ERV1 -1319 5772 5675 5 862 297 279 39 39 chrX 36327227 36327474 -130322822 - RodERV21-int LTR ERV1 -1987 5104 4880 5 862 355 317 39 39 chrX 36328232 36328465 -130321831 - RodERV21-int LTR ERV1 -3017 4074 3842 5 862 4075 121 8 106 chrX 36328480 36329314 -130320982 + L1Md_F2 LINE L1 484 1236 -5380 5 862 12494 62 0 0 chrX 36331998 36333663 -130316633 + L1Md_F2 LINE L1 3922 5586 -297 5 862 8097 51 2 0 chrX 36333663 36334657 -130315639 + L1Md_F2 LINE L1 5587 6582 0 5 862 522 0 0 0 chrX 36334963 36335021 -130315275 + (GA)n Simple_repeat Simple_repeat 1 58 0 5 862 5755 281 39 41 chrX 36335063 36337081 -130313215 - RodERV21-int LTR ERV1 -2273 2718 706 5 862 1064 76 0 0 chrX 36337952 36338085 -130312211 + B1_Mm SINE Alu 3 135 -12 5 862 464 0 18 0 chrX 36338085 36338141 -130312155 + (CAAAA)n Simple_repeat Simple_repeat 4 60 0 5 862 1064 76 0 0 chrX 36338141 36338152 -130312144 + B1_Mm SINE Alu 136 146 -1 5 862 254 296 95 9 chrX 36338445 36338561 -130311735 - MIRc SINE MIR -46 222 97 5 862 4775 34 0 2 chrX 36339103 36339665 -130310631 - L1Md_T LINE L1 0 6582 6022 5 862 1463 76 14 9 chrX 36339950 36340163 -130310133 - L1Md_F2 LINE L1 0 6582 6369 5 862 1953 85 7 4 chrX 36340207 36340478 -130309818 - L1Md_F2 LINE L1 -19 6563 6292 5 862 312 194 59 38 chrX 36340681 36340818 -130309478 + RMER1C Other Other 1217 1342 0 5 862 1891 79 35 7 chrX 36340829 36341191 -130309105 - L1Md_F2 LINE L1 -395 6187 5909 5 862 4160 120 36 19 chrX 36341188 36342425 -130307871 - L1Md_F2 LINE L1 -4236 1647 390 5 862 393 216 0 0 chrX 36342445 36342533 -130307763 + (TCTA)n Simple_repeat Simple_repeat 3 90 0 5 862 270 241 145 36 chrX 36342533 36342671 -130307625 - Lx5 LINE L1 -2 7048 6896 5 862 315 65 0 0 chrX 36342672 36342718 -130307578 + (TTAGGG)n Simple_repeat Simple_repeat 5 50 0 5 862 891 53 0 0 chrX 36342825 36342938 -130307358 + (TCTA)n Simple_repeat Simple_repeat 4 116 0 5 862 539 283 25 32 chrX 36342938 36343095 -130307201 - RSINE1 SINE B4 -8 157 2 5 862 1256 244 113 40 chrX 36345452 36346027 -130304269 + RMER12 LTR ERVK 1 798 -606 5 862 1789 183 90 27 chrX 36346070 36346480 -130303816 + Lx2B LINE L1 6547 6982 -18 5 862 295 254 82 84 chrX 36346480 36346721 -130303575 + RMER12 LTR ERVK 597 1014 -390 5 862 810 130 0 0 chrX 36346768 36346899 -130303397 + (TTCTC)n Simple_repeat Simple_repeat 4 134 0 5 862 647 196 126 63 chrX 36346905 36347096 -130303200 + RMER12 LTR ERVK 997 1199 -123 5 862 219 69 0 0 chrX 36347182 36347211 -130303085 + (T)n Simple_repeat Simple_repeat 1 29 0 5 862 1133 88 0 0 chrX 36347211 36347358 -130302938 - B1_Mm SINE Alu 0 147 1 5 862 7929 46 1 0 chrX 36347372 36348662 -130301634 - L1Md_F3 LINE L1 0 6584 5294 5 862 2098 78 3 7 chrX 36348662 36348958 -130301338 - L1Md_F2 LINE L1 0 6582 6288 5 862 4505 47 2 4 chrX 36348952 36349512 -130300784 + L1Md_F2 LINE L1 6024 6582 0 5 862 697 230 58 0 chrX 36349512 36349686 -130300610 - L1Md_A LINE L1 -6414 310 127 5 862 351 0 0 0 chrX 36349968 36350007 -130300289 + (TC)n Simple_repeat Simple_repeat 2 40 0 5 862 405 0 0 0 chrX 36350007 36350051 -130300245 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 862 36092 31 15 7 chrX 36350074 36356172 -130294124 - L1Md_T LINE L1 -2 6580 440 5 862 1616 38 0 0 chrX 36356450 36356636 -130293660 + B2_Mm1t SINE B2 2 187 -6 5 862 1412 263 69 5 chrX 36357448 36357826 -130292470 + MTD LTR MaLR 18 419 0 5 862 316 355 86 32 chrX 36358449 36358787 -130291509 - Lx9 LINE L1 0 7473 7118 5 862 2080 109 29 0 chrX 36358794 36359105 -130291191 - Lx LINE L1 -6 6648 6329 5 862 309 294 162 52 chrX 36359157 36359311 -130290985 + MLT1A0 LTR MaLR 40 210 -155 5 862 303 368 0 0 chrX 36359369 36359442 -130290854 + polypurine Low_complexity Low_complexity 3 75 0 5 862 1528 231 204 2 chrX 36359442 36359853 -130290443 + MT2A LTR ERVL 1 500 -33 5 862 483 18 0 0 chrX 36359853 36359909 -130290387 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 862 1528 231 204 2 chrX 36359909 36359939 -130290357 + MT2A LTR ERVL 501 530 -3 5 862 303 368 0 0 chrX 36359939 36360001 -130290295 + polypurine Low_complexity Low_complexity 76 137 0 5 862 592 256 27 44 chrX 36360127 36360437 -130289859 + L1MA9 LINE L1 5642 5949 -351 5 862 234 62 0 0 chrX 36360645 36360677 -130289619 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 862 6928 76 18 0 chrX 36361765 36362613 -130287683 - L1_Mus2 LINE L1 -2 6564 5712 5 862 198 0 0 0 chrX 36362613 36362635 -130287661 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 5 862 6928 92 27 0 chrX 36362635 36363333 -130286963 - L1_Mus2 LINE L1 -172 5711 4990 5 862 1558 220 118 42 chrX 36363333 36363945 -130286351 - L1Md_F LINE L1 -5627 892 235 5 862 626 262 28 54 chrX 36363948 36364204 -130286092 - L1VL1 LINE L1 -5926 496 91 5 862 243 0 0 0 chrX 36364227 36364254 -130286042 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 862 689 45 0 11 chrX 36364254 36364336 -130285960 - B1_Mm SINE Alu -8 139 58 5 862 297 207 63 57 chrX 36365115 36365274 -130285022 - L1MDa LINE L1 -2953 3584 3425 5 862 248 259 93 12 chrX 36365440 36365526 -130284770 + ORR1E LTR MaLR 100 192 -167 5 862 2137 325 154 49 chrX 36365612 36366853 -130283443 + MTE-int LTR MaLR 98 1521 -59 5 862 603 40 0 0 chrX 36366872 36366946 -130283350 + (TTTCC)n Simple_repeat Simple_repeat 5 78 0 5 862 232 341 26 110 chrX 36366998 36367153 -130283143 + ORR1E LTR MaLR 218 359 0 5 862 376 143 26 13 chrX 36367159 36367237 -130283059 - Lx7 LINE L1 -1476 6220 6142 5 862 218 258 145 0 chrX 36367442 36367504 -130282792 - PB1D7 SINE Alu -15 105 35 5 862 374 280 53 45 chrX 36367529 36367788 -130282508 - L1MDa LINE L1 -4022 2611 2348 5 862 230 81 27 0 chrX 36367798 36367835 -130282461 + (TTA)n Simple_repeat Simple_repeat 1 38 0 5 862 260 306 163 16 chrX 36369729 36369852 -130280444 - MIRb SINE MIR -30 238 98 5 862 388 310 78 70 chrX 36371292 36371549 -130278747 + RMER15 LTR ERVL 317 575 0 5 862 213 94 0 0 chrX 36371694 36371726 -130278570 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 862 444 208 0 39 chrX 36372056 36372186 -130278110 - Lx9 LINE L1 -18 7626 7502 5 862 287 278 120 89 chrX 36372575 36372628 -130277668 - LTR84a LTR ERVL -457 300 253 5 862 228 35 0 0 chrX 36372628 36372657 -130277639 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 862 287 278 120 89 chrX 36372657 36372828 -130277468 - LTR84a LTR ERVL -505 252 69 5 862 29 60 0 0 chrX 36373081 36373131 -130277165 + AT_rich Low_complexity Low_complexity 1 50 0 5 862 302 268 84 12 chrX 36373299 36373465 -130276831 + L1ME1 LINE L1 6000 6177 -2 5 862 552 319 101 16 chrX 36373580 36373886 -130276410 - Tigger13a DNA MER2_type -432 339 8 6 862 1142 47 0 20 chrX 36373893 36374045 -130276251 + L1Md_F3 LINE L1 6419 6567 -17 6 862 339 25 0 0 chrX 36374525 36374565 -130275731 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 862 585 363 47 25 chrX 36374580 36374854 -130275442 - B4A SINE B4 -5 287 8 6 862 3184 158 191 3 chrX 36375017 36375963 -130274333 - Lx5 LINE L1 -952 6098 4972 6 862 4533 226 16 2 chrX 36375971 36376881 -130273415 + Lx5 LINE L1 6125 7047 -3 6 862 202 136 0 64 chrX 36377035 36377082 -130273214 + A-rich Low_complexity Low_complexity 2 45 0 6 862 576 42 0 0 chrX 36377463 36377534 -130272762 + (GA)n Simple_repeat Simple_repeat 2 72 0 6 862 582 15 0 0 chrX 36377690 36377757 -130272539 + (GA)n Simple_repeat Simple_repeat 2 68 0 6 862 358 316 71 10 chrX 36378477 36378576 -130271720 - PB1 SINE Alu -22 105 1 6 862 282 353 95 0 chrX 36378938 36379054 -130271242 - PB1 SINE Alu 0 127 1 6 862 1524 209 28 6 chrX 36379181 36379498 -130270798 - Lx6 LINE L1 -4 7456 7133 6 862 3910 169 90 56 chrX 36379529 36380511 -130269785 + L1Md_F LINE L1 222 1236 -5380 6 862 2382 109 0 0 chrX 36380477 36380880 -130269416 + MusHAL1 LINE L1 1 403 -2309 6 862 15795 69 16 1 chrX 36380878 36383080 -130267216 + L1Md_F2 LINE L1 3353 5586 -297 6 862 7394 74 3 4 chrX 36383081 36384077 -130266219 + L1Md_F2 LINE L1 5588 6582 0 6 862 602 95 124 0 chrX 36384089 36384194 -130266102 + L1Md_F LINE L1 2711 2828 -3055 6 862 5036 230 72 20 chrX 36384193 36384437 -130265859 - Lx6 LINE L1 -418 7042 6767 6 862 198 0 0 0 chrX 36384437 36384459 -130265837 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 6 862 5036 223 60 21 chrX 36384459 36385585 -130264711 - Lx6 LINE L1 -694 6766 5603 6 862 2800 78 72 0 chrX 36385585 36385958 -130264338 + MTB LTR MaLR 1 400 0 6 862 2399 200 21 21 chrX 36385958 36386249 -130264047 - Lx6 LINE L1 -278 5602 5311 6 862 3434 172 39 58 chrX 36386246 36387116 -130263180 - Lx6 LINE L1 -3530 2350 1497 6 862 684 91 0 0 chrX 36387126 36387151 -130263145 + (TTC)n Simple_repeat Simple_repeat 1 25 0 6 862 1175 72 0 22 chrX 36387151 36387335 -130262961 + (TCC)n Simple_repeat Simple_repeat 1 180 0 6 862 684 91 0 0 chrX 36387335 36387408 -130262888 + (TTC)n Simple_repeat Simple_repeat 3 75 0 6 862 7450 74 0 12 chrX 36387426 36388423 -130261873 - L1Md_F2 LINE L1 -11 6571 5587 6 862 2856 249 66 43 chrX 36388443 36389793 -130260503 - Lx6 LINE L1 -4370 1507 122 6 862 22 70 0 0 chrX 36390237 36390280 -130260016 + AT_rich Low_complexity Low_complexity 1 43 0 6 862 696 187 246 0 chrX 36390280 36390451 -130259845 - B3 SINE B2 -3 213 1 6 862 294 29 0 0 chrX 36391060 36391095 -130259201 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 862 228 67 0 0 chrX 36392396 36392426 -130257870 + (TCTG)n Simple_repeat Simple_repeat 2 31 0 6 862 407 315 0 0 chrX 36392432 36392524 -130257772 - RSINE1 SINE B4 -17 148 57 6 862 578 276 51 43 chrX 36392520 36392755 -130257541 - MER67C LTR ERV1 -474 237 1 6 862 378 0 0 0 chrX 36394493 36394535 -130255761 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 862 296 274 113 0 chrX 36394855 36394961 -130255335 - PB1D7 SINE Alu -2 118 1 6 862 23 0 0 0 chrX 36395242 36395265 -130255031 + AT_rich Low_complexity Low_complexity 1 23 0 6 862 1034 183 55 73 chrX 36397097 36397453 -130252843 + RLTRETN_Mm LTR ERVK 6 409 0 6 862 357 296 164 48 chrX 36397670 36397901 -130252395 - L1M5 LINE L1 -666 5574 5317 6 862 24 0 0 0 chrX 36398216 36398240 -130252056 + AT_rich Low_complexity Low_complexity 1 24 0 6 862 24 0 0 0 chrX 36398251 36398275 -130252021 + AT_rich Low_complexity Low_complexity 1 24 0 6 862 333 252 46 9 chrX 36398379 36398487 -130251809 - L1MA5 LINE L1 -13 6287 6176 6 862 7849 141 50 5 chrX 36398647 36400052 -130250244 - L1_Mur3 LINE L1 -739 5141 3674 6 862 2701 26 2 172 chrX 36400052 36400522 -130249774 + RLTR10 LTR ERVK 1 390 0 6 862 16794 25 5 0 chrX 36400532 36402466 -130247830 + RLTR10-int LTR ERVK 41 1984 -3 6 862 3014 23 2 138 chrX 36402468 36402917 -130247379 + RLTR10 LTR ERVK 1 388 -2 6 862 2350 171 27 12 chrX 36402918 36403399 -130246897 - L1_Mur3 LINE L1 -2200 3680 3193 6 862 316 186 8 89 chrX 36403396 36403520 -130246776 + L1_Mur3 LINE L1 3051 3164 -2716 6 862 318 184 0 0 chrX 36403522 36403598 -130246698 + T-rich Low_complexity Low_complexity 1 76 0 6 862 877 201 0 0 chrX 36403599 36403748 -130246548 - B1_Mur3 SINE Alu 0 149 1 6 862 23 33 0 0 chrX 36403779 36403809 -130246487 + AT_rich Low_complexity Low_complexity 1 30 0 6 862 21 0 0 0 chrX 36403955 36403976 -130246320 + AT_rich Low_complexity Low_complexity 1 21 0 6 862 357 258 153 32 chrX 36404029 36404153 -130246143 + B1_Mur2 SINE Alu 5 143 -6 6 862 215 136 45 0 chrX 36404160 36404204 -130246092 + GA-rich Low_complexity Low_complexity 3 48 0 6 862 28510 127 16 20 chrX 36404271 36408074 -130242222 - Lx LINE L1 0 6654 2889 6 862 753 93 0 0 chrX 36408074 36408181 -130242115 + (TTCC)n Simple_repeat Simple_repeat 2 108 0 6 862 28510 184 33 59 chrX 36408181 36411050 -130239246 - Lx LINE L1 -2995 2888 217 6 862 23 0 0 0 chrX 36411054 36411077 -130239219 + AT_rich Low_complexity Low_complexity 1 23 0 6 862 423 0 0 0 chrX 36412250 36412297 -130237999 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 862 566 322 114 48 chrX 36413336 36413356 -130236940 - B4 SINE B4 -2 290 271 6 862 792 74 0 0 chrX 36413356 36413477 -130236819 + (TG)n Simple_repeat Simple_repeat 2 122 0 6 862 566 322 114 48 chrX 36413477 36413727 -130236569 - B4 SINE B4 -22 270 3 6 862 378 298 112 8 chrX 36414799 36414924 -130235372 - MLT1A0 LTR MaLR -10 355 218 6 862 236 122 41 0 chrX 36414965 36415014 -130235282 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 6 862 225 333 0 29 chrX 36415204 36415272 -130235024 + B4A SINE B4 84 149 -143 6 862 348 323 10 20 chrX 36415211 36415309 -130234987 + PB1 SINE Alu 6 102 -25 6 862 1321 254 80 3 chrX 36415391 36415734 -130234562 + MTE2b LTR MaLR 3 370 0 6 862 1969 256 109 13 chrX 36415734 36416277 -130234019 + MTE2b-int LTR MaLR 1 595 -985 6 862 822 276 68 20 chrX 36416299 36416695 -130233601 + Lx9 LINE L1 7215 7629 -15 6 862 3396 262 78 39 chrX 36416933 36417889 -130232407 + MTE2b-int LTR MaLR 579 1572 -8 6 862 982 130 136 25 chrX 36417920 36418118 -130232178 - URR1A DNA MER1_type 0 226 7 6 862 342 238 0 0 chrX 36418173 36418236 -130232060 + MTEb LTR MaLR 108 170 -209 6 862 264 240 38 62 chrX 36418342 36418422 -130231874 + MTEb LTR MaLR 282 359 0 6 862 358 248 9 60 chrX 36418424 36418540 -130231756 - MLT1A0 LTR MaLR -246 119 10 6 862 202 230 26 26 chrX 36419435 36419511 -130230785 + (TATG)n Simple_repeat Simple_repeat 1 76 0 6 862 419 286 79 75 chrX 36419516 36419796 -130230500 - B4 SINE B4 -11 281 1 6 862 2966 44 0 3 chrX 36420127 36420491 -130229805 - L1Md_F3 LINE L1 0 6584 6222 6 862 381 228 74 64 chrX 36420628 36420830 -130229466 - L1MC4a LINE L1 -1 7881 7678 6 862 261 119 0 0 chrX 36420849 36420891 -130229405 + (TATG)n Simple_repeat Simple_repeat 1 42 0 6 862 204 352 27 115 chrX 36420990 36421051 -130229245 + MIRb SINE MIR 14 74 -194 6 862 2038 171 39 21 chrX 36421051 36421434 -130228862 - ORR1B1 LTR MaLR 0 394 5 6 862 220 303 54 60 chrX 36421434 36421555 -130228741 + MIR3 SINE MIR 75 180 -88 6 862 21 0 0 0 chrX 36421566 36421587 -130228709 + AT_rich Low_complexity Low_complexity 1 21 0 6 862 565 320 15 5 chrX 36422211 36422412 -130227884 + B3 SINE B2 1 203 -13 6 862 25 0 0 0 chrX 36422443 36422468 -130227828 + AT_rich Low_complexity Low_complexity 1 25 0 6 862 29 60 0 0 chrX 36422599 36422649 -130227647 + AT_rich Low_complexity Low_complexity 1 50 0 6 862 36300 17 15 20 chrX 36422650 36427289 -130223007 + L1Md_A LINE L1 261 4927 -956 6 862 228 183 46 77 chrX 36427289 36427354 -130222942 - RMER20A LTR ERVK -268 248 186 6 862 36300 17 15 20 chrX 36427354 36428007 -130222289 + L1Md_A LINE L1 4928 5586 -297 6 862 8761 13 1 0 chrX 36428007 36429000 -130221296 + L1Md_A LINE L1 5587 6580 -2 6 862 678 245 177 21 chrX 36429001 36429385 -130220911 - L1ME1 LINE L1 -260 5919 5476 6 862 563 311 124 28 chrX 36429413 36430168 -130220128 - L1ME1 LINE L1 -808 5338 4511 6 862 10993 165 146 28 chrX 36430625 36435887 -130214409 - L1_Mus3 LINE L1 -6 6632 733 6 862 3337 43 2 0 chrX 36435887 36436282 -130214014 + MTA_Mm LTR MaLR 1 396 0 6 862 4371 180 55 65 chrX 36436282 36436800 -130213496 - L1_Mus3 LINE L1 -5884 732 184 6 862 5236 98 45 1 chrX 36436799 36437555 -130212741 - L1VL1 LINE L1 -5439 983 195 6 862 304 263 8 85 chrX 36437562 36437691 -130212605 - L1ME1 LINE L1 -2190 3956 3838 6 862 546 233 24 40 chrX 36437869 36437994 -130212302 - B1F SINE Alu 0 149 27 6 863 295 412 7 29 chrX 36438176 36438316 -130211980 + B4A SINE B4 148 284 -8 6 863 431 35 18 0 chrX 36438322 36438379 -130211917 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 863 697 345 79 25 chrX 36438489 36438804 -130211492 - MLT1A0 LTR MaLR -4 361 31 6 863 278 291 47 86 chrX 36438862 36438990 -130211306 + MTEa LTR MaLR 3 125 -254 6 863 341 237 10 58 chrX 36439241 36439344 -130210952 - L1M4 LINE L1 -520 5660 5563 6 863 386 257 99 42 chrX 36439731 36439922 -130210374 - L1M4 LINE L1 -632 5546 5345 6 863 240 308 26 0 chrX 36439928 36440006 -130210290 + ID2 SINE ID 2 81 -2 6 863 289 340 29 0 chrX 36440032 36440056 -130210240 - ID4_ SINE ID -55 97 33 6 863 301 278 0 0 chrX 36440056 36440110 -130210186 - tRNA-Ala-GCY_ tRNA tRNA -17 58 5 6 863 327 25 0 0 chrX 36440170 36440210 -130210086 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 863 519 251 92 5 chrX 36440270 36440454 -130209842 - L1M4 LINE L1 -864 5282 5083 6 863 2998 282 43 27 chrX 36440518 36441798 -130208498 - Lx9 LINE L1 0 7644 6226 6 863 305 291 77 26 chrX 36441897 36442052 -130208244 - Lx9 LINE L1 -1595 6049 5887 6 863 1145 88 0 0 chrX 36442235 36442383 -130207913 + B1_Mus1 SINE Alu 1 148 0 6 863 1303 266 96 23 chrX 36442682 36443121 -130207175 - RMER20B LTR ERVK -32 595 125 6 863 1270 145 178 21 chrX 36443281 36443562 -130206734 - Lx9 LINE L1 -31 5816 5492 6 863 4136 220 69 8 chrX 36443559 36444597 -130205699 - RMER1A Other Other -4 1026 49 6 863 308 266 13 0 chrX 36444602 36444681 -130205615 - L1_Rod LINE L1 -378 5469 5390 6 863 394 267 14 30 chrX 36444680 36444865 -130205431 - L1_Mm LINE L1 -1582 4564 4396 6 863 236 219 16 0 chrX 36444844 36444908 -130205388 - L1M4 LINE L1 -1136 5004 4940 6 863 14455 121 40 23 chrX 36444960 36445723 -130204573 + Lx4A LINE L1 3233 4012 -1865 6 863 2248 91 0 16 chrX 36445723 36446046 -130204250 - L1Md_F2 LINE L1 -11 6571 6254 6 863 14455 129 44 27 chrX 36446046 36448260 -130202036 + Lx4A LINE L1 4013 6238 -820 6 863 2849 12 0 3 chrX 36448260 36448586 -130201710 - L1Md_A LINE L1 0 6582 6258 6 863 6873 164 64 44 chrX 36448586 36449361 -130200935 + Lx4A LINE L1 6239 7056 -2 6 863 399 343 62 39 chrX 36449441 36449620 -130200676 + MER5A DNA MER1_type 1 183 -6 6 863 183 314 67 26 chrX 36450156 36450276 -130200020 - MIR3 SINE MIR -34 174 50 6 863 342 0 0 0 chrX 36450477 36450515 -130199781 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 863 1521 44 19 0 chrX 36451508 36451713 -130198583 - L1Md_F2 LINE L1 -507 6075 5867 6 863 3642 74 19 0 chrX 36451713 36452188 -130198108 + L1Md_F2 LINE L1 6086 6569 -13 6 863 275 250 28 42 chrX 36452326 36452397 -130197899 - ID4_ SINE ID -12 71 2 6 863 189 224 175 33 chrX 36452705 36452825 -130197471 + MIRb SINE MIR 79 215 -53 6 863 223 335 126 0 chrX 36452880 36453062 -130197234 + L3 LINE CR1 4128 4332 -157 7 863 441 0 0 0 chrX 36453527 36453576 -130196720 + (TA)n Simple_repeat Simple_repeat 2 50 0 7 863 1275 188 29 29 chrX 36454630 36454904 -130195392 - RLTR46 LTR ERVK -5 315 42 7 863 6653 72 0 21 chrX 36454933 36455877 -130194419 - L1_Mus2 LINE L1 0 6566 5643 7 863 4457 91 9 3 chrX 36455873 36456532 -130193764 + L1_Mus2 LINE L1 4947 5609 -274 7 863 1078 221 8 0 chrX 36456538 36456782 -130193514 - L1Md_F LINE L1 -5661 858 613 7 863 407 255 13 27 chrX 36456860 36457009 -130193287 - L1Md_F LINE L1 -5800 719 573 7 863 319 286 153 0 chrX 36457111 36457209 -130193087 + B4A SINE B4 32 144 -148 7 863 293 308 0 0 chrX 36457249 36457327 -130192969 + B4A SINE B4 124 201 -91 7 863 250 171 50 33 chrX 36457353 36457474 -130192822 + (CAGAGA)n Simple_repeat Simple_repeat 2 124 0 7 863 681 345 78 19 chrX 36457916 36458185 -130192111 + LTR33 LTR ERVL 3 287 -228 7 863 285 305 57 41 chrX 36458247 36458370 -130191926 + LTR33 LTR ERVL 385 509 -6 7 863 690 347 60 16 chrX 36458672 36459041 -130191255 + MamRep605 Unknown Unknown 236 620 -256 7 863 1202 295 20 9 chrX 36459029 36459374 -130190922 + MamRep605 Unknown Unknown 484 832 -44 7 863 990 231 195 6 chrX 36459690 36460003 -130190293 - ORR1D1 LTR MaLR 0 374 3 7 863 268 252 98 13 chrX 36460006 36460159 -130190137 - L1ME3B LINE L1 -334 5906 5741 7 863 360 282 139 14 chrX 36460190 36460334 -130189962 - L1ME3B LINE L1 -536 5637 5476 7 863 1279 238 114 9 chrX 36460347 36460473 -130189823 - Lx9 LINE L1 -1 7643 7494 7 863 360 64 0 0 chrX 36460473 36460520 -130189776 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 863 1279 238 114 9 chrX 36460520 36460850 -130189446 - Lx9 LINE L1 -151 7493 7140 7 863 2973 194 7 17 chrX 36460849 36461452 -130188844 + Lx9 LINE L1 6545 7141 -503 7 863 4175 116 7 0 chrX 36461470 36462065 -130188231 - MT2B LTR ERVL 0 601 3 7 863 192 40 0 0 chrX 36462138 36462163 -130188133 + (T)n Simple_repeat Simple_repeat 1 25 0 7 863 654 271 38 6 chrX 36462855 36463015 -130187281 + MTEa LTR MaLR 9 173 -206 7 863 1037 159 94 24 chrX 36463015 36463160 -130187136 + RMER1C Other Other 951 1112 -230 7 863 2625 163 46 142 chrX 36463160 36463923 -130186373 + RMER6C LTR ERVK 1 690 0 7 863 1037 159 94 24 chrX 36463923 36463990 -130186306 + RMER1C Other Other 1113 1178 -164 7 863 364 82 16 16 chrX 36464071 36464133 -130186163 + (TCCCC)n Simple_repeat Simple_repeat 3 64 0 7 863 391 227 9 18 chrX 36464136 36464248 -130186048 + RMER1C Other Other 1222 1332 -10 7 863 861 289 103 45 chrX 36464998 36465582 -130184714 + Lx8 LINE L1 6856 7473 0 7 863 294 200 133 0 chrX 36467064 36467139 -130183157 - MTEa LTR MaLR -15 364 280 7 863 348 155 0 0 chrX 36467293 36467364 -130182932 + GA-rich Low_complexity Low_complexity 3 73 0 7 863 356 325 38 17 chrX 36467599 36467716 -130182580 - B1F2 SINE Alu 0 127 1 7 863 616 318 24 52 chrX 36468090 36468302 -130181994 - B4 SINE B4 -75 217 12 7 863 365 279 65 8 chrX 36468321 36468444 -130181852 - L1MB4 LINE L1 -219 5961 5832 7 863 464 287 9 9 chrX 36468447 36468563 -130181733 - MTE2a LTR MaLR -12 367 252 7 863 458 235 60 8 chrX 36469048 36469181 -130181115 - Lx7 LINE L1 -1936 5760 5621 7 863 2101 196 71 29 chrX 36469286 36469807 -130180489 - Lx9 LINE L1 -167 7477 6935 7 863 437 283 18 0 chrX 36469852 36469965 -130180331 - PB1D10 SINE Alu -2 115 1 7 863 321 100 0 0 chrX 36470376 36470426 -130179870 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 863 544 240 61 28 chrX 36470428 36470642 -130179654 - L1MA6 LINE L1 -77 6223 6003 7 863 1202 267 94 38 chrX 36471205 36471734 -130178562 + Lx9 LINE L1 6914 7472 -172 7 863 27 0 0 0 chrX 36471835 36471862 -130178434 + AT_rich Low_complexity Low_complexity 1 27 0 7 863 894 270 18 32 chrX 36471869 36472152 -130178144 + RMER5 LTR ERV1 246 524 -10 7 863 336 175 0 0 chrX 36473166 36473229 -130177067 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 863 326 333 14 42 chrX 36473249 36473393 -130176903 + B1F1 SINE Alu 1 140 -9 7 863 1439 179 68 28 chrX 36473641 36473962 -130176334 - Lx4B LINE L1 -167 6891 6558 7 863 1021 167 21 0 chrX 36473958 36474144 -130176152 + Lx4B LINE L1 6364 6553 -505 7 863 7345 67 3 0 chrX 36474359 36475336 -130174960 - L1_Mus1 LINE L1 -1 6566 5587 7 863 24 32 0 0 chrX 36475554 36475585 -130174711 + AT_rich Low_complexity Low_complexity 1 31 0 7 863 21 82 0 0 chrX 36475614 36475663 -130174633 + AT_rich Low_complexity Low_complexity 1 49 0 7 863 25 0 0 0 chrX 36475926 36475951 -130174345 + AT_rich Low_complexity Low_complexity 1 25 0 7 863 683 327 80 9 chrX 36476435 36476803 -130173493 - Lx7 LINE L1 -235 7238 6822 7 863 8482 11 0 0 chrX 36476974 36478299 -130171997 - L1Md_A LINE L1 0 6582 5258 7 863 2627 40 178 0 chrX 36478300 36478648 -130171648 + IAPLTR2a LTR ERVK 2 411 0 7 863 3798 92 17 28 chrX 36478649 36479400 -130170896 + IAPEz-int LTR ERVK 9 662 -5819 7 863 2494 73 3 3 chrX 36479400 36479742 -130170554 + IAPEz-int LTR ERVK 1359 1700 -4781 7 863 6514 38 2 17 chrX 36479735 36480576 -130169720 + IAPEz-int LTR ERVK 5651 6479 -2 7 863 931 56 12 11 chrX 36480578 36480707 -130169589 + IAPLTR2a LTR ERVK 1 130 -181 7 863 1812 50 35 0 chrX 36480707 36480967 -130169329 - L1Md_A LINE L1 -6076 648 380 7 863 2321 57 0 0 chrX 36480992 36481292 -130169004 - L1Md_F2 LINE L1 -459 6123 5824 7 863 3800 57 15 0 chrX 36481292 36481768 -130168528 + L1Md_F2 LINE L1 6094 6576 -6 7 863 372 167 64 0 chrX 36481774 36481852 -130168444 + Lx6 LINE L1 6823 6905 -555 7 863 180 0 0 0 chrX 36482311 36482331 -130167965 + (CACAG)n Simple_repeat Simple_repeat 1 20 0 7 863 3631 65 30 8 chrX 36482958 36483453 -130166843 - L1Md_F2 LINE L1 -1 6581 6076 7 863 405 0 0 0 chrX 36483569 36483614 -130166682 + (GA)n Simple_repeat Simple_repeat 1 45 0 7 863 221 189 19 19 chrX 36483875 36483929 -130166367 + GA-rich Low_complexity Low_complexity 1 54 0 7 863 1028 265 138 14 chrX 36484055 36484403 -130165893 + Lx6 LINE L1 7008 7398 -62 7 863 26 0 0 0 chrX 36484415 36484441 -130165855 + AT_rich Low_complexity Low_complexity 1 26 0 7 863 401 192 408 7 chrX 36485210 36485357 -130164939 + B3 SINE B2 1 206 -10 7 863 22 35 0 0 chrX 36485357 36485386 -130164910 + AT_rich Low_complexity Low_complexity 1 29 0 7 863 25 31 0 0 chrX 36485584 36485616 -130164680 + AT_rich Low_complexity Low_complexity 1 32 0 7 863 35277 28 0 7 chrX 36485714 36490862 -130159434 + L1Md_A LINE L1 482 5586 -297 7 863 8746 15 0 8 chrX 36490862 36491512 -130158784 + L1Md_A LINE L1 5587 6236 -346 7 863 3535 15 0 2 chrX 36491512 36491909 -130158387 - MTA_Mm LTR MaLR 0 396 1 7 863 9128 36 4 1 chrX 36491909 36493004 -130157292 - MTA_Mm-int LTR MaLR 0 1098 1 7 863 3535 15 0 2 chrX 36493004 36493401 -130156895 - MTA_Mm LTR MaLR 0 396 1 7 863 8746 15 0 8 chrX 36493401 36493750 -130156546 + L1Md_A LINE L1 6237 6578 -4 7 863 13176 26 0 0 chrX 36493752 36495364 -130154932 + L1Md_A LINE L1 3975 5586 -297 7 863 8353 38 0 0 chrX 36495364 36496359 -130153937 + L1Md_A LINE L1 5587 6581 -1 7 863 2118 114 0 0 chrX 36496377 36496684 -130153612 + MusHAL1 LINE L1 1 307 -3047 7 863 3801 82 37 15 chrX 36496678 36497274 -130153022 - Lx3_Mus LINE L1 -540 6469 5861 7 863 954 101 7 0 chrX 36497264 36497403 -130152893 - Lx3_Mus LINE L1 -1248 5733 5594 7 863 2319 99 48 0 chrX 36497401 36497756 -130152540 + Lx3_Mus LINE L1 6479 6850 -159 7 863 2520 183 65 10 chrX 36497759 36498376 -130151920 + L1Md_A LINE L1 406 1056 -5668 7 863 8872 12 0 0 chrX 36498376 36499370 -130150926 + L1Md_T LINE L1 5589 6582 0 7 863 3841 94 0 33 chrX 36499371 36500000 -130150296 + L1Md_A LINE L1 2996 3603 -2280 7 863 14254 69 1 1 chrX 36500000 36501984 -130148312 + L1Md_F2 LINE L1 3604 5586 -297 1 863 7721 66 3 0 chrX 36501985 36502976 -130147320 + L1Md_F2 LINE L1 5588 6581 -1 1 863 893 130 17 17 chrX 36502974 36503146 -130147150 + Lx3_Mus LINE L1 6838 7009 0 2 863 35 24 0 0 chrX 36503447 36503489 -130146807 + AT_rich Low_complexity Low_complexity 1 42 0 3 863 441 296 46 39 chrX 36503517 36503647 -130146649 - RSINE1 SINE B4 -31 134 4 4 863 21 36 0 0 chrX 36503679 36503707 -130146589 + AT_rich Low_complexity Low_complexity 1 28 0 5 863 1091 169 56 5 chrX 36503816 36504030 -130146266 + URR1A DNA MER1_type 1 225 -1 6 863 419 276 19 112 chrX 36504486 36504755 -130145541 + L1MA4 LINE L1 5664 5907 -393 7 863 5286 56 5 1 chrX 36505465 36506130 -130144166 - L1_Mus1 LINE L1 -1 6566 5900 8 863 516 311 35 35 chrX 36506452 36506652 -130143644 + RMER15 LTR ERVL 373 572 -3 9 863 717 268 71 63 chrX 36506654 36507306 -130142990 - L1M4c LINE L1 -537 5999 5339 1 863 782 59 0 0 chrX 36507645 36507747 -130142549 - L1_Mus2 LINE L1 -329 6237 6136 1 863 2311 72 3 27 chrX 36507747 36508076 -130142220 + L1_Mus2 LINE L1 6245 6565 -1 1 863 22 0 0 0 chrX 36508076 36508098 -130142198 + AT_rich Low_complexity Low_complexity 1 22 0 1 863 777 189 28 0 chrX 36508464 36508607 -130141689 - B1_Mus2 SINE Alu 0 147 1 1 863 312 333 124 41 chrX 36508723 36508917 -130141379 - L1M4c LINE L1 -4644 1740 1531 1 863 4431 16 0 0 chrX 36509485 36509978 -130140318 + MT2_Mm LTR ERVL 1 493 0 1 863 44983 16 8 0 chrX 36509978 36515296 -130135000 + MERVL-int LTR ERVL 1 5360 -125 1 863 380 179 46 35 chrX 36515296 36515383 -130134913 + ORR1A3-int LTR MaLR 553 640 -1323 1 863 302 0 0 0 chrX 36515383 36515421 -130134875 + MERVL-int LTR ERVL 5448 5485 0 1 863 4431 16 0 0 chrX 36515421 36515914 -130134382 + MT2_Mm LTR ERVL 1 493 0 1 863 2100 149 65 3 chrX 36516224 36516593 -130133703 - ORR1B1 LTR MaLR 0 394 3 1 863 398 50 33 0 chrX 36516617 36516677 -130133619 + (TCTA)n Simple_repeat Simple_repeat 3 64 0 1 863 267 233 53 40 chrX 36517906 36517982 -130132314 - ORR1E LTR MaLR -1 378 302 1 863 3479 123 2 2 chrX 36518069 36518632 -130131664 + L1Md_F2 LINE L1 4883 5445 -432 1 863 4825 71 0 11 chrX 36518649 36519310 -130130986 + L1Md_F2 LINE L1 5823 6479 -103 1 863 326 169 17 0 chrX 36519311 36519370 -130130926 + RLTR13B1 LTR ERVK 834 893 0 2 863 465 97 11 173 chrX 36519370 36519493 -130130803 + L1Md_F2 LINE L1 6483 6582 0 1 863 6828 130 56 1 chrX 36519522 36520836 -130129460 + Lx4A LINE L1 5441 6840 -218 2 863 1903 215 16 64 chrX 36520982 36521483 -130128813 + Lx2B LINE L1 6501 6977 -23 2 863 1174 114 5 90 chrX 36521547 36521759 -130128537 - B2_Mm2 SINE B2 -1 194 1 2 863 293 379 38 0 chrX 36521782 36521914 -130128382 - ORR1E LTR MaLR -222 137 1 1 863 699 236 21 7 chrX 36521930 36522075 -130128221 + ORR1D2 LTR MaLR 1 147 -223 2 863 951 151 48 6 chrX 36522081 36522248 -130128048 + URR1B DNA MER1_type 52 225 0 2 863 877 239 94 38 chrX 36522248 36522450 -130127846 + ORR1D2 LTR MaLR 146 362 -8 2 863 685 312 69 75 chrX 36522454 36522759 -130127537 - MTE-int LTR MaLR -65 1515 1213 2 863 655 333 49 46 chrX 36522918 36523223 -130127073 - MLT1D LTR MaLR -21 484 179 2 863 2813 82 48 0 chrX 36523359 36523751 -130126545 + IAPLTR2a LTR ERVK 1 411 0 2 863 949 110 25 85 chrX 36523752 36523951 -130126345 + IAPEz-int LTR ERVK 9 195 -6286 2 863 263 283 0 0 chrX 36523951 36524004 -130126292 + RLTR27 LTR ERVK 223 275 -34 3 863 3358 64 4 16 chrX 36524004 36524582 -130125714 + IAPEz-int LTR ERVK 168 662 -5819 2 863 2090 72 0 0 chrX 36524582 36524860 -130125436 + IAPEz-int LTR ERVK 1359 1636 -4845 2 863 5779 40 3 19 chrX 36524859 36525615 -130124681 + IAPEz-int LTR ERVK 5736 6479 -2 2 863 2827 79 48 0 chrX 36525617 36526009 -130124287 + IAPLTR2a LTR ERVK 1 411 0 2 863 273 276 0 13 chrX 36526306 36526383 -130123913 - B3A SINE B2 -121 77 2 3 863 231 350 43 28 chrX 36526455 36526596 -130123700 + MIRc SINE MIR 3 145 -123 3 863 22 0 0 0 chrX 36527091 36527113 -130123183 + AT_rich Low_complexity Low_complexity 1 22 0 3 863 519 297 75 57 chrX 36527239 36527521 -130122775 + MLT1B LTR MaLR 12 298 -92 3 863 258 173 80 0 chrX 36527521 36527596 -130122700 + Lx7 LINE L1 7351 7431 -265 3 863 399 230 18 0 chrX 36527673 36527786 -130122510 + Lx7 LINE L1 7578 7692 -4 3 863 2647 73 47 29 chrX 36527950 36528331 -130121965 + RLTR10 LTR ERVK 1 388 -2 3 863 4396 121 99 45 chrX 36528333 36529274 -130121022 + RLTR10-int LTR ERVK 1 992 -995 3 863 407 320 17 17 chrX 36529425 36529657 -130120639 + RLTR10-int LTR ERVK 830 1061 -5481 3 863 663 74 0 0 chrX 36529807 36529902 -130120394 + RLTR10-int LTR ERVK 990 1084 -903 3 863 5911 34 0 1 chrX 36529902 36530631 -130119665 + RLTR10-int LTR ERVK 1259 1986 -1 3 863 2288 60 2 274 chrX 36530631 36531164 -130119132 + RLTR10 LTR ERVK 1 388 -2 3 863 1110 187 140 24 chrX 36531199 36531409 -130118887 + Lx9 LINE L1 7270 7485 -159 3 863 414 100 0 0 chrX 36531409 36531469 -130118827 + (CATA)n Simple_repeat Simple_repeat 3 62 0 3 863 1110 187 140 24 chrX 36531469 36531593 -130118703 + Lx9 LINE L1 7486 7642 -2 3 863 24 32 0 0 chrX 36531594 36531625 -130118671 + AT_rich Low_complexity Low_complexity 1 31 0 4 863 21 89 0 0 chrX 36531668 36531724 -130118572 + AT_rich Low_complexity Low_complexity 1 56 0 4 863 32 43 0 0 chrX 36531810 36531856 -130118440 + AT_rich Low_complexity Low_complexity 1 46 0 4 863 290 315 0 0 chrX 36532700 36532789 -130117507 + PB1D10 SINE Alu 27 115 -2 4 863 5598 87 22 0 chrX 36532933 36533481 -130116815 - L1VL2 LINE L1 -1789 1826 1267 4 863 6027 58 1 28 chrX 36533481 36534279 -130116017 - L1Md_F2 LINE L1 0 6582 5806 4 863 6587 101 13 5 chrX 36534279 36535512 -130114784 - L1VL2 LINE L1 -2349 1266 23 4 863 1168 68 0 0 chrX 36535521 36535668 -130114628 + B1_Mus2 SINE Alu 1 147 0 4 863 181 342 43 35 chrX 36537096 36537211 -130113085 - MIRb SINE MIR -89 179 64 4 863 511 305 0 19 chrX 36537531 36537688 -130112608 - MER3 DNA MER1_type -53 156 3 4 863 329 384 68 39 chrX 36539674 36540263 -130110033 - L2c LINE L2 -10 3365 2797 4 863 294 73 0 0 chrX 36540810 36540851 -130109445 + (T)n Simple_repeat Simple_repeat 1 41 0 5 863 486 319 43 16 chrX 36541202 36541390 -130108906 - MIRc SINE MIR 0 268 76 5 863 342 0 0 0 chrX 36543190 36543228 -130107068 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 863 200 225 185 33 chrX 36543595 36543687 -130106609 - MIR SINE MIR 0 262 157 5 863 184 59 0 56 chrX 36543953 36543989 -130106307 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 863 404 305 0 8 chrX 36544068 36544197 -130106099 - Lx7 LINE L1 -398 7298 7171 5 863 1956 181 24 1 chrX 36544185 36544606 -130105690 - L1_Mur3 LINE L1 -623 5254 4831 5 863 288 338 0 24 chrX 36544606 36544688 -130105608 + B4 SINE B4 65 144 -148 5 863 340 223 13 70 chrX 36544631 36544745 -130105551 + PB1D9 SINE Alu 5 109 -38 5 863 813 190 55 35 chrX 36544754 36544956 -130105340 - Lx7 LINE L1 -1832 5864 5659 5 863 297 300 62 48 chrX 36545016 36545226 -130105070 - RLTR15 LTR ERVK -14 345 133 6 863 314 184 142 50 chrX 36545320 36545440 -130104856 - RLTR15 LTR ERVK -228 131 1 6 863 920 223 144 27 chrX 36545443 36545742 -130104554 + L1_Mur3 LINE L1 5118 5451 -429 6 863 276 345 0 23 chrX 36546093 36546179 -130104117 - ID_B1 SINE B4 -48 176 93 6 863 1292 208 9 57 chrX 36546215 36546531 -130103765 + Lx4B LINE L1 6752 7052 -6 6 863 382 364 30 0 chrX 36546558 36546690 -130103606 - ID_B1 SINE B4 -8 216 81 6 863 309 222 31 16 chrX 36546699 36546763 -130103533 - ID4_ SINE ID -14 69 5 6 863 320 331 35 35 chrX 36546777 36546946 -130103350 - L1MB3 LINE L1 -51 6127 5959 6 863 455 292 0 0 chrX 36547037 36547126 -130103170 - RSINE1 SINE B4 -29 136 48 6 863 23 54 0 0 chrX 36547481 36547518 -130102778 + AT_rich Low_complexity Low_complexity 1 37 0 6 863 368 318 50 50 chrX 36547530 36547732 -130102564 - L1MB3 LINE L1 -308 5875 5674 6 863 201 125 0 48 chrX 36547772 36547814 -130102482 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 6 863 282 289 26 0 chrX 36547814 36547890 -130102406 - ID4_ SINE ID -3 80 3 7 863 258 266 0 12 chrX 36548051 36548131 -130102165 - L1MD LINE L1 -1936 4210 4132 7 863 694 250 16 35 chrX 36548317 36548536 -130101760 + Lx9 LINE L1 6924 7270 -374 7 863 1879 234 40 109 chrX 36548777 36548964 -130101332 - L1_Rod LINE L1 -2189 3658 3473 7 863 309 100 0 0 chrX 36548964 36549014 -130101282 + (CTA)n Simple_repeat Simple_repeat 1 50 0 7 863 1879 234 40 109 chrX 36549014 36549818 -130100478 - L1_Rod LINE L1 -2375 3472 2737 7 863 488 318 137 41 chrX 36549918 36550305 -130099991 + L1ME3B LINE L1 5700 6123 -117 7 863 342 335 31 62 chrX 36550859 36551085 -130099211 - RMER15 LTR ERVL -17 558 340 7 863 396 0 0 0 chrX 36551383 36551427 -130098869 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 863 1107 44 58 0 chrX 36551652 36551789 -130098507 - B1_Mm SINE Alu 0 147 3 7 863 228 236 18 35 chrX 36551789 36551846 -130098450 + MER5A1 DNA MER1_type 49 104 -62 7 863 405 0 0 0 chrX 36551946 36551991 -130098305 + (TC)n Simple_repeat Simple_repeat 2 46 0 8 863 3010 119 20 16 chrX 36552028 36552521 -130097775 + L1_Mus3 LINE L1 6142 6636 -2 8 863 239 93 23 0 chrX 36553234 36553277 -130097019 + (TA)n Simple_repeat Simple_repeat 1 44 0 8 863 815 75 0 0 chrX 36553863 36553969 -130096327 + L1Md_F3 LINE L1 5480 5585 -298 8 863 8457 32 0 1 chrX 36553970 36554969 -130095327 + L1Md_F3 LINE L1 5587 6584 0 8 863 508 225 72 0 chrX 36555519 36555630 -130094666 + B1_Mur1 SINE Alu 25 143 -6 8 863 1426 139 39 0 chrX 36555986 36556244 -130094052 + MusHAL1 LINE L1 1529 1796 -916 8 863 27 81 0 0 chrX 36556395 36556457 -130093839 + AT_rich Low_complexity Low_complexity 1 62 0 8 863 315 301 38 88 chrX 36556589 36556651 -130093645 + L1M5 LINE L1 5428 5483 -679 8 863 739 211 14 7 chrX 36556651 36556794 -130093502 + B1_Mus1 SINE Alu 3 146 -2 8 863 315 301 38 88 chrX 36556794 36557048 -130093248 + L1M5 LINE L1 5484 5728 -434 8 863 601 140 0 0 chrX 36557057 36557157 -130093139 - MusHAL1 LINE L1 -1047 1665 1566 8 863 415 356 65 30 chrX 36557439 36557607 -130092689 - MLT1I LTR MaLR -143 268 95 9 863 1175 62 0 7 chrX 36558342 36558489 -130091807 - B1_Mm SINE Alu -1 146 1 9 863 33482 50 2 5 chrX 36558631 36564310 -130085986 + L1Md_T LINE L1 1 5589 -297 9 863 8337 40 0 0 chrX 36564310 36565306 -130084990 + L1Md_T LINE L1 5590 6585 0 9 863 2387 68 3 21 chrX 36566074 36566405 -130083891 + L1_Mus2 LINE L1 6241 6565 -1 9 863 289 297 143 0 chrX 36566836 36566927 -130083369 + PB1D9 SINE Alu 3 106 -14 9 863 1006 179 57 11 chrX 36567285 36567460 -130082836 + ORR1D1 LTR MaLR 1 183 -191 9 863 542 97 84 0 chrX 36567463 36567540 -130082756 + polypyrimidine Low_complexity Low_complexity 83 169 0 9 863 1161 78 0 32 chrX 36567540 36567726 -130082570 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 9 863 542 97 84 0 chrX 36567726 36567803 -130082493 + polypyrimidine Low_complexity Low_complexity 3 82 0 9 863 332 204 70 15 chrX 36567803 36567914 -130082382 + ORR1D1 LTR MaLR 265 370 -9 9 863 397 282 157 22 chrX 36567914 36568099 -130082197 - ID_B1 SINE B4 -13 211 2 9 863 252 86 0 0 chrX 36568398 36568433 -130081863 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 1 107 15686 75 2 7 chrX 36568451 36571359 -130078937 - L1Md_F2 LINE L1 -12 6570 3677 1 864 7727 91 2 9 chrX 36571358 36573426 -130076870 - L1Md_F2 LINE L1 -3459 2424 373 1 864 414 0 0 0 chrX 36574169 36574215 -130076081 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1 864 545 295 122 37 chrX 36574542 36574788 -130075508 - RLTR16 LTR ERVK -207 298 32 1 864 3135 207 104 12 chrX 36575440 36576182 -130074114 - RLTR40 LTR ERVK -5 812 3 1 864 204 358 36 24 chrX 36576401 36576484 -130073812 + L2c LINE L2 3223 3306 -81 1 864 3437 212 19 40 chrX 36576879 36577967 -130072329 + Lx5 LINE L1 5146 6275 -775 1 864 2065 159 0 0 chrX 36577967 36578293 -130072003 + ORR1A3 LTR MaLR 1 326 0 1 864 3437 261 103 68 chrX 36578293 36579033 -130071263 + Lx5 LINE L1 6276 7428 -32 1 864 255 79 0 0 chrX 36579033 36579071 -130071225 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 1 864 405 0 0 0 chrX 36579209 36579254 -130071042 + (T)n Simple_repeat Simple_repeat 1 45 0 1 864 522 328 120 19 chrX 36579942 36580283 -130070013 - MLT1A0 LTR MaLR 0 374 9 1 864 202 29 57 0 chrX 36580299 36580334 -130069962 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 1 864 880 297 94 78 chrX 36580336 36580720 -130069576 - MTD LTR MaLR -24 395 6 1 864 325 358 56 52 chrX 36580737 36580917 -130069379 - L1M5 LINE L1 -2262 3884 3700 1 864 224 100 25 0 chrX 36580917 36580957 -130069339 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 1 864 325 358 56 52 chrX 36580957 36581044 -130069252 - L1M5 LINE L1 -2447 3699 3616 1 864 229 343 15 0 chrX 36581047 36581114 -130069182 + L2c LINE L2 3250 3317 -70 1 864 1537 205 119 0 chrX 36581141 36581468 -130068828 + ORR1D2 LTR MaLR 1 366 -4 1 864 1217 289 76 13 chrX 36581477 36581859 -130068437 - MTD LTR MaLR 0 419 14 1 864 235 341 47 0 chrX 36581909 36581994 -130068302 - MIRc SINE MIR -115 153 65 1 864 282 235 62 0 chrX 36582262 36582343 -130067953 - Lx7 LINE L1 0 7696 7611 1 864 360 338 80 9 chrX 36582623 36582835 -130067461 + L2c LINE L2 3150 3376 -11 1 864 26 0 0 0 chrX 36584160 36584186 -130066110 + AT_rich Low_complexity Low_complexity 1 26 0 1 864 185 154 26 0 chrX 36584698 36584737 -130065559 + CT-rich Low_complexity Low_complexity 2 41 0 1 864 501 182 0 0 chrX 36585268 36585367 -130064929 + (TG)n Simple_repeat Simple_repeat 2 100 0 1 864 318 306 312 0 chrX 36585369 36585529 -130064767 - ID_B1 SINE B4 -13 211 2 1 864 332 339 62 43 chrX 36586091 36586245 -130064051 - MIRb SINE MIR -57 211 53 1 864 5230 42 0 3 chrX 36587517 36588156 -130062140 + L1Md_F2 LINE L1 5943 6579 -3 1 864 1376 132 94 40 chrX 36588534 36588811 -130061485 + Lx4A LINE L1 6328 6619 -439 1 864 222 118 0 0 chrX 36589010 36589044 -130061252 + (T)n Simple_repeat Simple_repeat 1 34 0 1 864 1102 90 7 0 chrX 36589044 36589189 -130061107 - B1_Mm SINE Alu 0 147 2 1 864 6661 84 11 1 chrX 36589639 36590575 -130059721 - L1_Mus1 LINE L1 0 6567 5623 1 864 778 309 52 47 chrX 36591987 36592330 -130057966 + MLT1A1 LTR MaLR 4 354 -54 1 864 368 366 35 14 chrX 36592335 36592479 -130057817 - B1F1 SINE Alu -2 147 1 1 864 181 333 18 0 chrX 36593650 36593707 -130056589 - MIRb SINE MIR -35 233 176 1 864 21 57 0 0 chrX 36594309 36594344 -130055952 + AT_rich Low_complexity Low_complexity 1 35 0 1 864 287 296 88 100 chrX 36594613 36594699 -130055597 + MIRb SINE MIR 26 107 -161 1 864 216 0 0 0 chrX 36594699 36594723 -130055573 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 864 547 165 62 118 chrX 36594723 36594867 -130055429 - B1_Mur2 SINE Alu -13 136 1 1 864 287 296 88 100 chrX 36594867 36595019 -130055277 + MIRb SINE MIR 108 261 -7 1 864 276 333 0 77 chrX 36595031 36595148 -130055148 + PB1D7 SINE Alu 2 109 -11 1 864 360 0 0 0 chrX 36595490 36595530 -130054766 + (TAA)n Simple_repeat Simple_repeat 2 41 0 1 864 617 260 16 0 chrX 36596485 36596612 -130053684 - RSINE1 SINE B4 -34 131 3 1 864 266 353 60 42 chrX 36596633 36596849 -130053447 + L2 LINE L2 2727 2946 -473 1 864 1139 259 114 37 chrX 36597049 36597265 -130053031 + RMER19B LTR ERVK 318 544 -358 1 864 369 0 0 0 chrX 36597265 36597306 -130052990 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 864 1139 287 116 40 chrX 36597306 36597559 -130052737 + RMER19B LTR ERVK 328 668 -234 1 864 3572 110 10 2 chrX 36597559 36598077 -130052219 + L1_Mus3 LINE L1 6116 6637 -1 1 864 1101 317 119 42 chrX 36598077 36598103 -130052193 + RMER19B LTR ERVK 571 610 -1 1 864 1118 208 33 157 chrX 36600222 36600428 -130049868 - ORR1D1 LTR MaLR 0 374 184 1 864 604 56 22 0 chrX 36600428 36600517 -130049779 + (GA)n Simple_repeat Simple_repeat 1 91 0 1 864 1118 208 33 157 chrX 36600517 36600737 -130049559 - ORR1D1 LTR MaLR -191 183 1 1 864 2646 95 0 40 chrX 36600878 36601282 -130049014 + Lx LINE L1 6260 6647 -7 1 864 627 323 108 19 chrX 36601394 36601665 -130048631 + B4A SINE B4 2 292 0 1 864 313 269 0 13 chrX 36601667 36601746 -130048550 + HAL1-3A_ME LINE L1 1975 2052 -806 1 864 256 270 11 22 chrX 36601747 36601838 -130048458 + GA-rich Low_complexity Low_complexity 1 90 0 1 864 584 273 83 7 chrX 36602027 36602171 -130048125 + B3A SINE B2 3 157 -41 1 864 952 46 0 8 chrX 36602330 36602461 -130047835 + L1Md_F2 LINE L1 6442 6571 -11 1 864 387 41 0 0 chrX 36602540 36602589 -130047707 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 864 513 0 0 0 chrX 36604065 36604122 -130046174 + (TTTA)n Simple_repeat Simple_repeat 1 57 0 1 864 5209 202 65 6 chrX 36604122 36605440 -130044856 - Lx2B LINE L1 -21 7037 5545 1 864 31341 88 14 5 chrX 36605608 36611774 -130038522 - L1Md_F2 LINE L1 -3 6579 355 1 864 1046 263 70 25 chrX 36611944 36612260 -130038036 + Lx9 LINE L1 7032 7361 -283 1 864 7783 41 20 1 chrX 36612268 36613239 -130037057 - L1_Mm LINE L1 -795 5088 4100 1 864 408 277 104 92 chrX 36613254 36613417 -130036879 + B3A SINE B2 34 198 0 1 864 360 43 0 0 chrX 36613442 36613488 -130036808 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 864 423 0 0 0 chrX 36613488 36613534 -130036762 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 864 1608 41 0 0 chrX 36614501 36614697 -130035599 - L1Md_T LINE L1 0 6582 6387 1 864 193 345 59 42 chrX 36614971 36615089 -130035207 - MIRc SINE MIR -127 141 22 1 864 7829 111 15 22 chrX 36615583 36617140 -130033156 - L1_Mus1 LINE L1 0 6997 5476 1 864 10054 162 21 9 chrX 36617140 36619585 -130030711 - Lx2 LINE L1 -452 6545 4077 1 864 759 77 0 0 chrX 36619683 36619787 -130030509 + B1_Mus1 SINE Alu 39 142 -6 1 864 205 86 0 28 chrX 36619794 36619830 -130030466 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 1 864 450 0 0 0 chrX 36619889 36619939 -130030357 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 864 989 135 0 20 chrX 36619939 36620080 -130030216 - B1_Mur4 SINE Alu -9 141 1 1 864 355 260 26 58 chrX 36620084 36620239 -130030057 - Lx9 LINE L1 0 7644 7495 1 864 24 0 0 0 chrX 36621197 36621221 -130029075 + AT_rich Low_complexity Low_complexity 1 24 0 1 864 338 330 68 0 chrX 36621305 36621423 -130028873 + MER58B DNA MER1_type 210 335 -6 1 864 9410 90 28 35 chrX 36621734 36623192 -130027104 - Lx3_Mus LINE L1 -5 7004 5586 1 864 4174 215 43 18 chrX 36623191 36624130 -130026166 - Lx2B LINE L1 -114 6886 5925 1 864 32031 107 8 3 chrX 36624590 36630745 -130019551 - L1_Mus1 LINE L1 0 6567 386 1 864 22 0 0 0 chrX 36630883 36630905 -130019391 + AT_rich Low_complexity Low_complexity 1 22 0 1 864 21 0 0 0 chrX 36631530 36631551 -130018745 + AT_rich Low_complexity Low_complexity 1 21 0 1 864 26 64 0 0 chrX 36631582 36631629 -130018667 + AT_rich Low_complexity Low_complexity 1 47 0 1 864 336 336 17 0 chrX 36631777 36631893 -130018403 - MLT1A0 LTR MaLR 0 365 248 1 864 303 298 55 69 chrX 36632053 36632327 -130017969 - L1MB8 LINE L1 -90 6088 5819 1 864 264 303 43 52 chrX 36632328 36632443 -130017853 - PB1D9 SINE Alu -6 114 1 1 864 40 37 0 0 chrX 36632519 36632573 -130017723 + AT_rich Low_complexity Low_complexity 1 54 0 1 864 1681 320 75 0 chrX 36632613 36633201 -130017095 - Lx8 LINE L1 -141 7332 6701 1 864 1313 279 5 34 chrX 36633194 36633579 -130016717 - Lx9 LINE L1 -506 7138 6765 1 864 656 235 108 0 chrX 36633619 36633785 -130016511 - Lx9 LINE L1 -771 6873 6690 1 864 278 317 16 47 chrX 36633950 36634079 -130016217 - Lx9 LINE L1 -1655 5989 5865 1 864 316 353 0 0 chrX 36634080 36634182 -130016114 - MIR SINE MIR -69 193 92 1 864 578 370 48 66 chrX 36634299 36634802 -130015494 - Lx8 LINE L1 -56 7417 6924 1 864 1772 234 117 23 chrX 36634806 36635327 -130014969 - RMER15 LTR ERVL -5 570 1 1 864 943 285 60 33 chrX 36635348 36635714 -130014582 - Lx9 LINE L1 -595 7049 6674 1 864 939 327 45 28 chrX 36635737 36636096 -130014200 + Lx9 LINE L1 6318 6682 -962 1 864 584 91 0 20 chrX 36636131 36636232 -130014064 - L1_Mus2 LINE L1 -1 6565 6467 1 864 533 277 184 3 chrX 36636386 36636669 -130013627 - Lx8 LINE L1 -363 7110 6777 1 864 4291 242 45 21 chrX 36636790 36638008 -130012288 - Lx9 LINE L1 -9 7635 6353 1 864 1140 62 0 7 chrX 36638116 36638263 -130012033 - B1_Mm SINE Alu 0 147 2 1 864 700 221 48 6 chrX 36638270 36638438 -130011858 - Lx9 LINE L1 -1675 5969 5795 1 864 1004 204 53 49 chrX 36638429 36638713 -130011583 - L1_Rod LINE L1 -3575 2272 1988 1 864 311 347 86 7 chrX 36638737 36638888 -130011408 - HAL1-3A_ME LINE L1 -412 2446 2284 1 864 706 50 0 20 chrX 36638890 36638991 -130011305 + (TTTC)n Simple_repeat Simple_repeat 3 101 0 1 864 1069 70 0 0 chrX 36639003 36639146 -130011150 - B1_Mus1 SINE Alu 0 148 6 1 864 273 219 219 32 chrX 36639047 36639170 -130011126 - RLTR25A LTR ERVK -521 582 437 1 864 418 229 82 8 chrX 36639170 36639320 -130010976 - RMER1C Other Other -24 1318 1200 2 864 338 350 16 0 chrX 36639350 36639473 -130010823 - RMER1C Other Other -687 655 531 2 864 226 316 83 41 chrX 36639543 36639761 -130010535 - L1_Rod LINE L1 -6860 312 86 2 864 1331 314 81 20 chrX 36639769 36640251 -130010045 - Lx8 LINE L1 -1 7472 6967 2 864 501 92 0 0 chrX 36640251 36640327 -130009969 + (TG)n Simple_repeat Simple_repeat 1 76 0 2 864 1331 314 81 20 chrX 36640327 36640500 -130009796 - Lx8 LINE L1 -507 6966 6777 2 864 1031 191 74 0 chrX 36641780 36641995 -130008301 + Lx3C LINE L1 6744 6974 -2 2 864 2799 50 3 6 chrX 36642006 36642369 -130007927 - L1Md_F2 LINE L1 -3 6579 6218 2 864 208 328 0 32 chrX 36642516 36642579 -130007717 + MIR3 SINE MIR 142 202 -6 2 864 290 279 190 0 chrX 36642907 36643065 -130007231 + L1MA4 LINE L1 5716 5903 -397 2 864 33400 91 2 11 chrX 36643136 36649282 -130001014 - L1Md_F2 LINE L1 -62 6520 217 2 864 191 290 146 44 chrX 36649357 36649494 -130000802 + L2a LINE L2 3274 3424 -2 2 864 10979 63 0 0 chrX 36651618 36653018 -129997278 + L1Md_F2 LINE L1 4187 5586 -297 2 864 7922 55 1 1 chrX 36653018 36654002 -129996294 + L1Md_F2 LINE L1 5587 6570 -12 2 864 24 53 0 0 chrX 36654839 36654877 -129995419 + AT_rich Low_complexity Low_complexity 1 38 0 2 864 939 84 116 0 chrX 36655142 36655297 -129994999 + Lx LINE L1 6479 6651 -3 2 864 21 0 0 0 chrX 36655356 36655377 -129994919 + AT_rich Low_complexity Low_complexity 1 21 0 2 864 32 43 0 0 chrX 36655641 36655687 -129994609 + AT_rich Low_complexity Low_complexity 1 46 0 2 864 553 182 182 0 chrX 36655867 36655988 -129994308 + B1_Mur4 SINE Alu 2 144 -6 2 864 16420 83 8 57 chrX 36655988 36658554 -129991742 - L1_Mm LINE L1 -1131 4752 2312 2 864 700 117 10 0 chrX 36658556 36658659 -129991637 - U6 snRNA snRNA -3 104 1 2 864 444 19 0 0 chrX 36658961 36659014 -129991282 + (TATAG)n Simple_repeat Simple_repeat 3 55 0 2 864 323 288 0 0 chrX 36659014 36659094 -129991202 - ID4_ SINE ID -1 82 3 2 864 21 0 0 0 chrX 36659262 36659283 -129991013 + AT_rich Low_complexity Low_complexity 1 21 0 2 864 9325 104 38 1 chrX 36659283 36660816 -129989480 - Lx3_Mus LINE L1 -8 7001 5414 2 864 483 187 0 0 chrX 36660859 36660966 -129989330 + (TA)n Simple_repeat Simple_repeat 1 107 0 2 864 369 0 0 0 chrX 36660966 36661007 -129989289 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 864 601 343 45 0 chrX 36661008 36661186 -129989110 - B3 SINE B2 -20 196 11 2 864 24 0 0 0 chrX 36662300 36662324 -129987972 + AT_rich Low_complexity Low_complexity 1 24 0 2 864 267 104 0 0 chrX 36662960 36663008 -129987288 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 2 864 236 329 13 0 chrX 36663653 36663732 -129986564 - ID4 SINE ID -2 81 2 2 864 1193 278 54 24 chrX 36663841 36664213 -129986083 + MTE2b-int LTR MaLR 1195 1577 -3 2 864 473 268 41 0 chrX 36664216 36664339 -129985957 + MTE2b LTR MaLR 1 128 -251 2 864 6851 108 7 0 chrX 36664339 36665331 -129984965 - L1_Mus1 LINE L1 -48 5835 4837 2 864 5442 82 10 0 chrX 36665331 36665449 -129984847 + L1_Mus1 LINE L1 5833 5956 -611 2 864 247 0 51 26 chrX 36665449 36665488 -129984808 + (CAAA)n Simple_repeat Simple_repeat 4 43 0 2 864 5442 82 10 0 chrX 36665488 36666096 -129984200 + L1_Mus1 LINE L1 5957 6565 -2 2 864 419 137 0 0 chrX 36666100 36666173 -129984123 + RLTR42-int LTR ERVK 2054 2126 -3396 2 864 233 337 11 11 chrX 36666220 36666307 -129983989 + MTE2b LTR MaLR 108 194 -185 2 864 4751 196 63 56 chrX 36666316 36667298 -129982998 + L1_Mus1 LINE L1 98 941 -5675 2 864 436 53 0 62 chrX 36667298 36667378 -129982918 + L1Md_F2 LINE L1 6507 6581 -1 2 864 27185 124 15 7 chrX 36667378 36672925 -129977371 + L1_Mus1 LINE L1 942 6558 -9 2 864 1177 141 66 39 chrX 36672928 36673186 -129977110 + MusHAL1 LINE L1 1246 1510 -1202 2 864 12971 161 17 13 chrX 36673181 36676794 -129973502 + L1_Mus4 LINE L1 2995 6625 -11 2 864 293 249 49 63 chrX 36676947 36677170 -129973126 - Lx9 LINE L1 0 7644 7425 2 864 564 258 65 18 chrX 36677264 36677481 -129972815 + L1_Mur3 LINE L1 2088 2314 -3566 2 864 332 271 28 94 chrX 36677487 36677740 -129972556 + L1VL1 LINE L1 41 406 -6016 2 864 394 264 43 7 chrX 36677791 36677932 -129972364 + L1_Mus1 LINE L1 664 809 -5807 2 864 24451 119 59 11 chrX 36677934 36683486 -129966810 + L1_Mus1 LINE L1 725 6565 -2 2 864 4706 196 78 63 chrX 36683497 36685029 -129965267 + L1_Mur3 LINE L1 2289 3843 -2037 2 864 33843 36 1 0 chrX 36685030 36690881 -129959415 + L1Md_T LINE L1 1 5589 -297 2 864 9009 5 0 0 chrX 36690881 36691927 -129958369 + L1Md_T LINE L1 5590 6585 0 2 864 441 156 67 0 chrX 36691927 36692017 -129958279 + L1_Mur3 LINE L1 3831 3926 -1954 2 864 303 51 0 17 chrX 36692017 36692077 -129958219 - L1Md_F2 LINE L1 0 6582 6524 2 864 290 133 267 0 chrX 36692076 36692151 -129958145 + L1_Mur3 LINE L1 3928 4022 -1858 2 864 3782 240 36 13 chrX 36692176 36692903 -129957393 + Lx6 LINE L1 6514 7252 -208 2 864 387 0 0 0 chrX 36692903 36692946 -129957350 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 864 3782 240 36 13 chrX 36692946 36693135 -129957161 + Lx6 LINE L1 7253 7450 -10 2 864 231 434 43 14 chrX 36693653 36693861 -129956435 + L4 LINE RTE 1111 1324 -705 2 864 273 75 0 0 chrX 36694440 36694480 -129955816 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 864 32 26 0 0 chrX 36694708 36694747 -129955549 + AT_rich Low_complexity Low_complexity 1 39 0 2 864 1855 315 44 39 chrX 36694889 36695932 -129954364 - Lx5 LINE L1 -20 7030 5974 2 864 566 308 129 20 chrX 36696553 36696895 -129953401 - MTEa LTR MaLR 0 379 1 2 864 858 303 8 36 chrX 36696911 36697271 -129953025 - MTEa-int LTR MaLR -13 1567 1218 2 864 7850 130 21 13 chrX 36697272 36698764 -129951532 + Lx3A LINE L1 5478 6975 -6 2 864 408 362 29 0 chrX 36698768 36698906 -129951390 + B3 SINE B2 70 211 -5 2 864 508 230 77 28 chrX 36699099 36699242 -129951054 - ORR1D1 LTR MaLR 0 374 225 2 865 486 221 0 104 chrX 36700832 36700915 -129949381 + B4 SINE B4 24 85 -207 2 865 420 240 167 0 chrX 36700915 36701011 -129949285 + PB1D9 SINE Alu 3 114 -6 2 865 443 308 27 47 chrX 36701038 36701144 -129949152 + B4 SINE B4 119 221 -71 2 865 243 0 0 0 chrX 36701144 36701171 -129949125 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 865 443 308 27 47 chrX 36701171 36701214 -129949082 + B4 SINE B4 222 265 -27 2 865 189 74 0 0 chrX 36701218 36701245 -129949051 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 865 1759 89 4 0 chrX 36701344 36701592 -129948704 + L1_Mus4 LINE L1 6383 6631 -5 2 865 1115 95 0 0 chrX 36701833 36701980 -129948316 - B1_Mus2 SINE Alu 0 147 1 2 865 2077 253 82 20 chrX 36702002 36702640 -129947656 - Lx8 LINE L1 -4 7469 6793 2 865 403 317 83 14 chrX 36702662 36702806 -129947490 - RSINE1 SINE B4 0 165 12 2 865 588 239 18 48 chrX 36702818 36702985 -129947311 - Lx8 LINE L1 -675 6798 6637 2 865 313 303 11 0 chrX 36702993 36703082 -129947214 + Lx8 LINE L1 6506 6595 -878 2 865 235 298 0 0 chrX 36703428 36703485 -129946811 - ORR1D1 LTR MaLR -317 62 6 2 865 3067 69 5 2 chrX 36703512 36703907 -129946389 - MTA_Mm LTR MaLR 0 396 1 2 865 3027 105 76 0 chrX 36703960 36704435 -129945861 + L1_Mus3 LINE L1 6126 6636 -2 2 865 558 67 0 0 chrX 36704448 36704523 -129945773 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 865 615 243 7 62 chrX 36704604 36704642 -129945654 + B1_Mur2 SINE Alu 13 51 -98 2 865 3540 182 68 78 chrX 36704642 36705635 -129944661 - RLTR13C1 LTR ERVK 0 983 1 2 865 615 243 7 62 chrX 36705635 36705741 -129944555 + B1_Mur2 SINE Alu 52 149 0 2 865 514 353 101 22 chrX 36706698 36706976 -129943320 + RMER15 LTR ERVL 276 575 0 2 865 783 200 15 7 chrX 36707431 36707567 -129942729 + B1_Mur3 SINE Alu 13 149 0 2 865 331 368 35 7 chrX 36707656 36707801 -129942495 - B1F SINE Alu 0 149 1 2 865 2660 154 67 11 chrX 36707811 36708348 -129941948 - L1_Mur2 LINE L1 -1103 4774 4208 2 865 26786 50 0 31 chrX 36708344 36709132 -129941164 - L1Md_F2 LINE L1 -12 6570 5811 2 865 1228 48 0 0 chrX 36709132 36709278 -129941018 - B1_Mm SINE Alu 0 147 2 2 865 26786 74 7 11 chrX 36709278 36713023 -129937273 - L1Md_F2 LINE L1 -73 5810 2050 2 865 1634 160 55 0 chrX 36713023 36713335 -129936961 - L1_Mur2 LINE L1 -1661 4216 3888 2 865 323 384 27 22 chrX 36713560 36713783 -129936513 + MIRb SINE MIR 20 239 -23 2 865 245 391 31 61 chrX 36713776 36713972 -129936324 + MIRb SINE MIR 7 196 -72 2 865 36530 11 0 0 chrX 36714094 36719186 -129931110 - L1Md_A LINE L1 0 6582 1492 2 865 15433 17 1 1 chrX 36721332 36723127 -129927169 + L1Md_A LINE L1 3792 5586 -297 2 865 8073 45 8 0 chrX 36723127 36724115 -129926181 + L1Md_A LINE L1 5587 6582 0 2 865 661 119 16 0 chrX 36724694 36724820 -129925476 - L1_Mus4 LINE L1 -4 6632 6505 2 865 1829 218 29 5 chrX 36724880 36725259 -129925037 + Lx5 LINE L1 6659 7046 -4 2 865 24171 154 26 18 chrX 36725366 36730478 -129919818 + L1Md_F LINE L1 233 5355 -528 2 865 5330 28 9 6 chrX 36730787 36731430 -129918866 - L1Md_F3 LINE L1 -14 6570 5926 2 865 1126 23 0 0 chrX 36731433 36731564 -129918732 + L1Md_F3 LINE L1 5785 5915 -669 2 865 214 370 10 29 chrX 36731602 36731705 -129918591 + L2b LINE L2 3069 3169 -206 2 865 1054 97 0 7 chrX 36733254 36733391 -129916905 + B1_Mus2 SINE Alu 1 137 -10 2 865 234 0 0 0 chrX 36733391 36733417 -129916879 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2 865 855 0 0 0 chrX 36733424 36733519 -129916777 + (GAA)n Simple_repeat Simple_repeat 2 96 0 2 865 196 265 69 46 chrX 36733653 36733740 -129916556 - L3 LINE CR1 -98 4391 4303 2 865 330 318 229 0 chrX 36734590 36734769 -129915527 + MIRb SINE MIR 17 236 -32 2 865 485 291 70 35 chrX 36735060 36735231 -129915065 - MLT1D LTR MaLR -314 191 15 2 865 26 50 0 0 chrX 36735532 36735572 -129914724 + AT_rich Low_complexity Low_complexity 1 40 0 2 865 390 134 0 0 chrX 36735795 36735862 -129914434 + (GA)n Simple_repeat Simple_repeat 1 67 0 2 865 23 0 0 0 chrX 36735863 36735886 -129914410 + AT_rich Low_complexity Low_complexity 1 23 0 2 865 208 186 0 44 chrX 36736742 36736787 -129913509 - L3 LINE CR1 -4348 141 99 2 865 285 333 83 6 chrX 36737826 36737983 -129912313 - L2a LINE L2 -1 3425 3257 2 865 402 286 11 33 chrX 36738581 36738678 -129911618 + polypurine Low_complexity Low_complexity 4 97 0 2 865 965 108 17 11 chrX 36738678 36738855 -129911441 + (GGGAA)n Simple_repeat Simple_repeat 3 180 0 2 865 402 286 11 33 chrX 36738855 36738938 -129911358 + polypurine Low_complexity Low_complexity 98 180 0 2 865 697 188 64 136 chrX 36739112 36739349 -129910947 - Lx9 LINE L1 -7 7637 7432 2 865 621 27 0 0 chrX 36739349 36739424 -129910872 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 865 697 188 64 136 chrX 36739424 36739451 -129910845 - Lx9 LINE L1 -213 7431 7394 2 865 934 318 75 38 chrX 36739528 36740031 -129910265 - Lx8 LINE L1 -135 7338 6817 2 865 1507 202 112 12 chrX 36740914 36741254 -129909042 + ORR1D1 LTR MaLR 1 374 0 3 865 603 40 0 0 chrX 36742816 36742890 -129907406 + (TC)n Simple_repeat Simple_repeat 2 75 0 3 865 22 0 0 0 chrX 36743909 36743931 -129906365 + AT_rich Low_complexity Low_complexity 1 22 0 3 865 858 109 0 0 chrX 36744096 36744224 -129906072 + (TC)n Simple_repeat Simple_repeat 2 129 0 3 865 399 41 0 0 chrX 36744224 36744272 -129906024 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 865 1218 326 72 29 chrX 36744329 36744818 -129905478 - MER77 LTR ERVL -2 605 96 3 865 244 232 224 0 chrX 36744965 36745090 -129905206 - L1MC LINE L1 -873 5471 5319 3 865 6946 173 21 20 chrX 36745116 36746603 -129903693 - Lx3C LINE L1 -4 6972 5488 3 865 3087 158 24 0 chrX 36746622 36747196 -129903100 + L1_Mur1 LINE L1 4170 4757 -1129 3 865 5642 165 39 12 chrX 36747445 36748505 -129901791 - Lx2B LINE L1 0 7000 5913 3 865 511 96 0 0 chrX 36748505 36748588 -129901708 + L1_Mur1 LINE L1 4846 4928 -958 3 865 6377 223 96 8 chrX 36748735 36749382 -129900914 - Lx6 LINE L1 -10 7450 6745 3 865 705 110 0 0 chrX 36749382 36749491 -129900805 + (TG)n Simple_repeat Simple_repeat 2 110 0 3 865 6377 223 96 8 chrX 36749491 36750314 -129899982 - Lx6 LINE L1 -716 6744 5851 3 865 1919 147 90 14 chrX 36750309 36750675 -129899621 + L1_Mur2 LINE L1 24 417 -6295 3 865 218 301 12 12 chrX 36750796 36750880 -129899416 + (TATATG)n Simple_repeat Simple_repeat 3 86 0 3 865 528 333 0 62 chrX 36750880 36751040 -129899256 - B4A SINE B4 -2 290 141 3 865 228 67 0 0 chrX 36751054 36751084 -129899212 + (T)n Simple_repeat Simple_repeat 1 30 0 3 865 280 152 17 0 chrX 36751095 36751154 -129899142 - Lx9 LINE L1 -1 7643 7584 3 865 279 216 49 98 chrX 36751202 36751284 -129899012 - B4 SINE B4 -205 87 10 3 865 501 17 0 0 chrX 36751324 36751382 -129898914 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 865 594 0 0 0 chrX 36751603 36751669 -129898627 + (TTTC)n Simple_repeat Simple_repeat 4 69 0 3 865 6809 118 46 59 chrX 36751676 36752176 -129898120 - Lx3_Mus LINE L1 -18 6991 6499 3 865 1495 53 11 0 chrX 36752176 36752363 -129897933 + B2_Mm1t SINE B2 1 189 -4 3 865 6809 118 46 59 chrX 36752363 36753064 -129897232 - Lx3_Mus LINE L1 -511 6498 5806 3 865 4381 77 39 2 chrX 36753064 36753661 -129896635 + Lx3_Mus LINE L1 5173 5791 -95 3 865 1119 76 0 0 chrX 36753682 36753827 -129896469 - B1_Mus2 SINE Alu -1 146 2 3 865 5578 233 61 23 chrX 36754011 36754310 -129895986 - Lx9 LINE L1 -7 7637 7320 3 865 411 68 0 0 chrX 36754310 36754369 -129895927 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 865 5578 233 61 23 chrX 36754369 36755560 -129894736 - Lx9 LINE L1 -325 7319 6092 3 865 1070 269 97 23 chrX 36757034 36757376 -129892920 + MTD LTR MaLR 51 417 -2 3 865 333 0 0 0 chrX 36757517 36757554 -129892742 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 865 415 357 80 70 chrX 36757690 36757991 -129892305 - MamGypLTR1b LTR Gypsy -13 769 466 3 865 235 343 110 9 chrX 36759808 36759841 -129890455 - MER45A DNA Tip100 -32 146 114 3 865 1069 160 28 18 chrX 36759841 36760058 -129890238 + Lx2A1 LINE L1 6788 7006 -2 3 865 235 343 110 9 chrX 36760058 36760133 -129890163 - MER45A DNA Tip100 -65 113 28 3 865 258 281 0 0 chrX 36761302 36761366 -129888930 - LTR78 LTR ERV1 -226 1078 1015 3 865 395 386 48 0 chrX 36761721 36761910 -129888386 + MLT1D LTR MaLR 1 198 -307 3 865 405 284 23 39 chrX 36761911 36762039 -129888257 + ID_B1 SINE B4 86 211 -13 3 865 324 48 0 0 chrX 36762042 36762084 -129888212 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 3 865 321 317 213 26 chrX 36762850 36763080 -129887216 + LTR81B LTR ERV1? 1101 1373 -20 3 865 22 0 0 0 chrX 36763855 36763877 -129886419 + AT_rich Low_complexity Low_complexity 1 22 0 3 865 3308 38 5 0 chrX 36764331 36764725 -129885571 - MTA_Mm LTR MaLR 0 396 1 3 865 424 325 41 83 chrX 36764776 36764994 -129885302 - MLT1I LTR MaLR -1 410 202 3 865 26 30 0 0 chrX 36765715 36765748 -129884548 + AT_rich Low_complexity Low_complexity 1 33 0 3 865 213 327 36 0 chrX 36766242 36766297 -129883999 - ID SINE ID -167 57 1 3 865 22996 112 13 3 chrX 36766331 36770647 -129879649 + L1_Mus1 LINE L1 2201 6567 0 3 865 7553 88 7 1 chrX 36772999 36774252 -129876044 + L1_Mus1 LINE L1 5301 6564 -3 3 865 180 0 0 0 chrX 36774261 36774281 -129876015 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 865 5024 144 17 15 chrX 36774281 36775147 -129875149 + Lx LINE L1 5786 6653 -1 3 865 804 299 5 14 chrX 36775147 36775361 -129874935 + MTEb LTR MaLR 162 373 -6 3 865 244 348 99 21 chrX 36775435 36775576 -129874720 + MIRb SINE MIR 116 267 -1 3 865 627 184 24 16 chrX 36776204 36776331 -129873965 + B1_Mm SINE Alu 4 131 -16 3 865 6276 138 16 26 chrX 36776333 36777401 -129872895 + Lx2 LINE L1 5941 6997 0 3 865 31 58 0 0 chrX 36777408 36777460 -129872836 + AT_rich Low_complexity Low_complexity 1 52 0 3 865 22357 150 53 6 chrX 36777460 36781805 -129868491 - L1_Mus3 LINE L1 -4 6634 2072 3 865 264 30 0 0 chrX 36781805 36781838 -129868458 + (TTG)n Simple_repeat Simple_repeat 2 34 0 3 865 22357 152 52 14 chrX 36781838 36783414 -129866882 - L1_Mus3 LINE L1 -3812 2071 422 3 865 468 314 32 80 chrX 36783419 36783537 -129866759 - MTE2b LTR MaLR -201 178 67 3 865 393 39 0 0 chrX 36783537 36783588 -129866708 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 865 468 314 32 80 chrX 36783588 36783656 -129866640 - MTE2b LTR MaLR -313 66 1 3 865 4006 323 61 19 chrX 36783659 36783708 -129866588 - MTE2b-int LTR MaLR -3 1577 1529 3 865 3001 98 0 12 chrX 36783708 36784120 -129866176 - MTB_Mm LTR MaLR 0 407 1 3 865 4006 323 61 19 chrX 36784120 36785555 -129864741 - MTE2b-int LTR MaLR -52 1528 32 3 865 1146 167 46 14 chrX 36785619 36785838 -129864458 - URR1A DNA MER1_type 0 226 1 3 865 1123 69 14 0 chrX 36786544 36786689 -129863607 + B1_Mus1 SINE Alu 2 148 0 3 865 1436 287 50 36 chrX 36788623 36789128 -129861168 + MER82 DNA MER2_type 136 647 -6 3 865 468 292 53 87 chrX 36789227 36789377 -129860919 - B3A SINE B2 -41 157 13 3 865 237 400 74 12 chrX 36790349 36790511 -129859785 + MIRb SINE MIR 86 257 -11 3 865 208 374 10 0 chrX 36790531 36790630 -129859666 - L3 LINE CR1 -578 3911 3812 3 865 396 0 0 0 chrX 36791951 36791995 -129858301 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 865 296 384 80 0 chrX 36792148 36792260 -129858036 + MER115 DNA Tip100 344 464 -229 3 865 34471 70 4 3 chrX 36792266 36798470 -129851826 - L1Md_F2 LINE L1 -1 6584 278 3 865 189 0 0 0 chrX 36798600 36798621 -129851675 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 865 348 24 0 0 chrX 36798621 36798661 -129851635 + (TA)n Simple_repeat Simple_repeat 1 41 0 3 865 340 246 0 0 chrX 36798662 36798731 -129851565 + MER115 DNA Tip100 624 692 -1 3 865 198 333 42 0 chrX 36798801 36798873 -129851423 - MIR SINE MIR -66 196 122 3 865 685 273 0 14 chrX 36798938 36799083 -129851213 + B1_Mur1 SINE Alu 2 144 -5 3 865 426 318 50 81 chrX 36799116 36799376 -129850920 + MIR SINE MIR 3 254 -8 3 865 310 324 136 115 chrX 36799667 36799946 -129850350 - MLT1F2 LTR MaLR -275 285 1 3 865 3441 106 5 40 chrX 36800438 36800989 -129849307 + Lx LINE L1 6121 6652 -2 3 865 370 323 98 21 chrX 36801062 36801255 -129849041 - MIR SINE MIR -21 241 34 3 865 214 333 58 0 chrX 36801367 36801454 -129848842 - MIRb SINE MIR -7 261 170 3 865 868 267 146 13 chrX 36801704 36801943 -129848353 + B4A SINE B4 14 284 -8 3 865 216 111 0 0 chrX 36801960 36801996 -129848300 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 865 186 169 68 0 chrX 36802085 36802144 -129848152 + CT-rich Low_complexity Low_complexity 5 67 0 3 865 251 338 0 0 chrX 36802237 36802305 -129847991 + polypyrimidine Low_complexity Low_complexity 6 73 0 3 865 311 304 15 74 chrX 36802312 36802447 -129847849 - L1M4 LINE L1 -565 5609 5483 3 865 1020 202 9 37 chrX 36802466 36802682 -129847614 - B3 SINE B2 -3 213 4 3 865 395 307 31 0 chrX 36802732 36802895 -129847401 + L1M2 LINE L1 5654 5821 -470 3 865 238 293 185 6 chrX 36803397 36803575 -129846721 + MIRb SINE MIR 48 260 -8 3 865 310 333 62 31 chrX 36804484 36804679 -129845617 + Lx8 LINE L1 7143 7468 -176 3 865 2078 294 75 52 chrX 36804730 36806072 -129844224 - Lx9 LINE L1 -369 7275 5734 3 865 185 373 0 56 chrX 36806073 36806144 -129844152 - L3 LINE CR1 -1049 3440 3374 3 865 673 214 78 0 chrX 36806342 36806496 -129843800 - Lx5 LINE L1 0 7050 6885 3 865 707 318 136 3 chrX 36808485 36808816 -129841480 + Lx9 LINE L1 7060 7434 -210 3 865 288 0 0 0 chrX 36808837 36808869 -129841427 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 865 369 0 0 0 chrX 36808869 36808909 -129841387 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 865 237 169 15 44 chrX 36808972 36809040 -129841256 + Lx9 LINE L1 7570 7635 -9 3 865 558 323 26 5 chrX 36809357 36809547 -129840749 + B3A SINE B2 2 195 -3 3 865 22 0 0 0 chrX 36809554 36809576 -129840720 + AT_rich Low_complexity Low_complexity 1 22 0 3 865 4806 54 0 10 chrX 36809766 36810381 -129839915 - L1Md_F2 LINE L1 0 6582 5974 3 865 249 81 0 0 chrX 36810381 36810418 -129839878 + L1Md_F2 LINE L1 5920 5956 -626 3 865 5006 101 1 1 chrX 36810957 36811673 -129838623 - L1_Mm LINE L1 -260 5623 4908 3 865 3551 70 0 2 chrX 36811674 36812134 -129838162 + L1_Mus2 LINE L1 6108 6566 0 3 865 331 78 15 15 chrX 36813271 36813336 -129836960 + (TTTTG)n Simple_repeat Simple_repeat 1 65 0 3 865 1870 277 62 26 chrX 36813656 36814186 -129836110 + Lx5 LINE L1 6484 7032 -18 3 865 277 290 0 0 chrX 36815050 36815119 -129835177 - ID4 SINE ID -10 73 5 3 865 212 77 26 0 chrX 36815119 36815158 -129835138 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 3 865 345 333 116 12 chrX 36816439 36816603 -129833693 - MER5A DNA MER1_type -7 182 2 3 865 218 287 77 29 chrX 36816612 36816716 -129833580 - MER5B DNA MER1_type 0 178 70 3 865 434 321 71 54 chrX 36816986 36817266 -129833030 - B4 SINE B4 -4 288 4 3 865 249 256 138 39 chrX 36817280 36817410 -129832886 - Tigger7 DNA MER2_type -35 2456 2314 4 865 226 370 140 0 chrX 36817439 36817539 -129832757 - PB1D10 SINE Alu -3 114 1 4 865 319 329 74 19 chrX 36819056 36819225 -129831071 + ORR1D2 LTR MaLR 2 184 -175 4 865 352 328 129 12 chrX 36820699 36820894 -129829402 - MIRb SINE MIR -15 253 44 4 865 522 0 0 0 chrX 36820935 36820993 -129829303 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 865 234 0 0 0 chrX 36820993 36821018 -129829278 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 865 181 365 25 93 chrX 36822028 36822146 -129828150 - L3 LINE CR1 -14 4475 4366 4 865 1624 285 76 20 chrX 36822513 36823108 -129827188 - Lx8 LINE L1 -2 7471 6844 4 865 402 330 39 41 chrX 36823105 36823345 -129826951 + Lx9 LINE L1 7155 7429 -215 4 865 1382 307 51 0 chrX 36823515 36823945 -129826351 - Lx8 LINE L1 -615 6858 6407 4 865 2121 232 51 26 chrX 36824450 36825096 -129825200 - L1_Rod LINE L1 -2511 3336 2675 4 865 700 350 82 11 chrX 36825200 36825469 -129824827 - B4A SINE B4 -4 288 1 4 865 1738 55 5 0 chrX 36825602 36825819 -129824477 + L1Md_F2 LINE L1 5369 5586 -297 4 865 7857 54 2 5 chrX 36825819 36826818 -129823478 + L1Md_F2 LINE L1 5587 6582 0 4 865 242 268 48 12 chrX 36827178 36827261 -129823035 + MIRc SINE MIR 102 187 -81 4 865 4267 93 2 3 chrX 36827334 36827928 -129822368 - L1_Mus4 LINE L1 -7 6629 6037 4 865 2124 79 79 0 chrX 36827928 36828232 -129822064 + Lx LINE L1 5642 5969 -685 4 865 4105 185 66 75 chrX 36828232 36829125 -129821171 - RMER19B LTR ERVK -17 885 1 4 865 242 309 6 134 chrX 36830388 36830560 -129819736 - ORR1E LTR MaLR -125 234 85 4 108 1558 353 52 53 chrX 36830591 36831456 -129818840 - MTE-int LTR MaLR -34 1546 683 4 866 447 35 0 0 chrX 36831671 36831728 -129818568 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 866 336 296 26 0 chrX 36832193 36832308 -129817988 + L1MC1 LINE L1 6214 6331 -2 4 866 931 315 62 7 chrX 36832367 36832674 -129817622 + MER58B DNA MER1_type 18 341 0 4 866 3781 58 56 8 chrX 36832916 36833124 -129817172 - Lx3_Mus LINE L1 -879 6130 5907 4 866 222 37 0 0 chrX 36833124 36833151 -129817145 + (TTA)n Simple_repeat Simple_repeat 3 29 0 4 866 4265 58 18 0 chrX 36833151 36833710 -129816586 - Lx3_Mus LINE L1 -1103 5906 5341 4 866 5814 97 16 3 chrX 36833713 36834560 -129815736 + Lx3_Mus LINE L1 6152 7009 0 4 866 250 398 111 6 chrX 36834978 36835150 -129815146 + MIR SINE MIR 7 196 -66 4 866 331 294 153 7 chrX 36835326 36835470 -129814826 - MIR SINE MIR -73 189 25 4 866 732 243 89 11 chrX 36835618 36835809 -129814487 - MTD LTR MaLR -1 418 213 4 866 226 247 56 0 chrX 36835865 36835954 -129814342 - Lx7 LINE L1 -2 7694 7601 4 866 313 103 14 14 chrX 36836339 36836408 -129813888 + (TTTTTG)n Simple_repeat Simple_repeat 4 72 0 4 866 356 233 66 28 chrX 36837455 36837561 -129812735 + Lx8 LINE L1 7266 7375 -98 4 866 951 268 49 30 chrX 36837560 36837864 -129812432 - Lx9 LINE L1 -263 7381 7072 4 866 477 0 0 0 chrX 36837879 36837932 -129812364 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 866 274 154 409 7 chrX 36837932 36838069 -129812227 + Lx9 LINE L1 7448 7639 -5 4 866 236 191 0 21 chrX 36838075 36838123 -129812173 + GA-rich Low_complexity Low_complexity 2 48 0 4 866 2953 31 14 0 chrX 36838885 36839241 -129811055 + L1Md_F2 LINE L1 6220 6580 -2 4 866 979 108 20 32 chrX 36839359 36839591 -129810705 + Lx LINE L1 6360 6651 -3 4 866 735 145 42 57 chrX 36840743 36840955 -129809341 - Lx9 LINE L1 -4 7640 7432 4 866 792 266 42 9 chrX 36840955 36841171 -129809125 + Lx9 LINE L1 7061 7283 -361 4 866 493 222 16 49 chrX 36841904 36842089 -129808207 + RMER17C LTR ERVK 97 275 -135 4 866 330 263 92 50 chrX 36842295 36842415 -129807881 + MER63B DNA AcHobo 312 436 0 4 866 21 36 0 0 chrX 36842587 36842615 -129807681 + AT_rich Low_complexity Low_complexity 1 28 0 4 866 324 282 102 54 chrX 36842719 36843161 -129807135 + L1M5 LINE L1 3004 3466 -2680 4 866 444 349 50 53 chrX 36843316 36843822 -129806474 - HAL1N1_MD LINE L1 -748 5825 5329 4 866 37 0 0 0 chrX 36844675 36844712 -129805584 + AT_rich Low_complexity Low_complexity 1 37 0 4 866 2017 204 55 50 chrX 36846161 36846647 -129803649 + RLTR31A_Mm LTR ERVK 2 584 0 4 866 35 63 0 0 chrX 36846759 36846822 -129803474 + AT_rich Low_complexity Low_complexity 1 63 0 4 866 763 273 54 32 chrX 36847003 36847317 -129802979 - L1MB1 LINE L1 -35 6133 5813 4 866 2183 47 22 0 chrX 36847327 36847605 -129802691 - L1Md_A LINE L1 0 6582 6299 4 866 248 0 0 0 chrX 36847605 36847632 -129802664 - L1Md_A LINE L1 -487 6095 6069 4 866 488 249 19 137 chrX 36847629 36847885 -129802411 - L1MA9 LINE L1 -441 5871 5646 4 866 829 248 150 76 chrX 36847896 36848237 -129802059 - MTE2b LTR MaLR -13 366 1 4 866 354 293 51 51 chrX 36848360 36848594 -129801702 - L1M2 LINE L1 -507 5784 5551 4 866 481 304 52 17 chrX 36848597 36848881 -129801415 + L1M3 LINE L1 3897 4227 -1913 4 866 1956 106 7 0 chrX 36848881 36849164 -129801132 - Lx LINE L1 -7 6647 6363 4 866 2103 102 48 0 chrX 36849164 36849458 -129800838 + Lx LINE L1 5983 6290 -364 4 866 2259 15 0 0 chrX 36849456 36849721 -129800575 - L1Md_T LINE L1 -1830 4053 3789 4 866 13089 20 0 0 chrX 36849719 36851241 -129799055 + L1Md_T LINE L1 4065 5586 -297 4 866 8156 46 1 0 chrX 36851242 36852235 -129798061 + L1Md_T LINE L1 5588 6581 -1 4 866 271 88 0 0 chrX 36852235 36852269 -129798027 + Lx LINE L1 6278 6311 -343 4 866 721 279 9 47 chrX 36852269 36852483 -129797813 + B3 SINE B2 11 216 0 4 866 297 277 0 12 chrX 36852541 36852625 -129797671 - Lx7 LINE L1 -496 7200 7118 4 866 239 208 0 0 chrX 36852635 36852683 -129797613 + Lx7 LINE L1 7267 7314 -382 4 866 294 239 54 0 chrX 36852735 36852827 -129797469 + Lx7 LINE L1 7600 7696 0 4 866 302 238 15 45 chrX 36852976 36853108 -129797188 + L1M3 LINE L1 4342 4469 -1674 4 866 421 287 192 7 chrX 36853140 36853291 -129797005 - B3A SINE B2 -18 180 2 4 866 704 303 116 26 chrX 36853398 36853451 -129796845 + L1M2 LINE L1 3658 3715 -2428 4 866 336 48 0 0 chrX 36853451 36853493 -129796803 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 866 704 303 116 26 chrX 36853493 36853975 -129796321 + L1M2 LINE L1 3716 4240 -1903 4 866 829 245 205 29 chrX 36854029 36854336 -129795960 - ORR1D2 LTR MaLR -5 365 5 4 866 449 268 112 26 chrX 36854478 36854896 -129795400 - L1M3c LINE L1 -4582 1559 1106 4 866 264 282 31 39 chrX 36855367 36855454 -129794842 + polypyrimidine Low_complexity Low_complexity 44 130 0 4 866 585 42 0 0 chrX 36855454 36855526 -129794770 + (TCTCC)n Simple_repeat Simple_repeat 5 76 0 4 866 264 282 31 39 chrX 36855526 36855567 -129794729 + polypyrimidine Low_complexity Low_complexity 3 43 0 4 866 504 382 6 43 chrX 36856256 36856420 -129793876 - RSINE1 SINE B4 -5 160 3 4 866 1054 116 0 0 chrX 36856662 36856809 -129793487 + B1_Mus2 SINE Alu 1 147 0 4 866 1193 275 36 56 chrX 36857054 36857412 -129792884 + ORR1E LTR MaLR 3 353 -6 4 866 1271 177 25 36 chrX 36857492 36857768 -129792528 + RLTR46 LTR ERVK 42 314 -6 4 866 437 241 42 90 chrX 36857773 36857973 -129792323 + IAPEY3-int LTR ERVK 3 198 -1272 4 866 3752 248 40 23 chrX 36857974 36858974 -129791322 + IAPEY3-int LTR ERVK 535 1551 -6129 4 866 5396 209 7 13 chrX 36858971 36860239 -129790057 + IAPEY3-int LTR ERVK 4417 5699 -1882 4 866 3154 152 6 87 chrX 36860259 36860895 -129789401 + IAPEY3-int LTR ERVK 6850 7434 -147 4 866 2561 58 0 0 chrX 36860897 36861209 -129789087 + RLTR10-int LTR ERVK 1486 1797 -190 4 866 728 111 0 0 chrX 36861234 36861342 -129788954 + IAPEY3-int LTR ERVK 7474 7581 0 4 866 1231 196 29 40 chrX 36861351 36861628 -129788668 + RLTR46 LTR ERVK 42 315 -5 4 866 630 292 5 59 chrX 36861899 36861959 -129788337 - B3A SINE B2 0 198 150 4 866 276 30 0 0 chrX 36861959 36861992 -129788304 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 866 630 292 5 59 chrX 36861992 36862135 -129788161 - B3A SINE B2 -49 149 6 4 866 301 22 0 42 chrX 36862297 36862345 -129787951 + (TTG)n Simple_repeat Simple_repeat 2 47 0 4 866 1183 68 0 0 chrX 36862345 36862493 -129787803 - B1_Mus1 SINE Alu 0 148 1 4 866 31 44 0 0 chrX 36862546 36862591 -129787705 + AT_rich Low_complexity Low_complexity 1 45 0 4 866 27 29 0 0 chrX 36862673 36862707 -129787589 + AT_rich Low_complexity Low_complexity 1 34 0 4 866 228 190 0 115 chrX 36862741 36862854 -129787442 + T-rich Low_complexity Low_complexity 6 105 0 4 866 296 364 15 15 chrX 36862895 36863026 -129787270 - B1F SINE Alu -1 148 18 4 866 35 0 0 0 chrX 36863244 36863279 -129787017 + AT_rich Low_complexity Low_complexity 1 35 0 4 866 943 258 145 24 chrX 36863513 36863843 -129786453 + MTD LTR MaLR 2 380 -39 4 866 198 0 0 0 chrX 36863843 36863865 -129786431 + (TTG)n Simple_repeat Simple_repeat 2 23 0 4 866 943 258 145 24 chrX 36863865 36863907 -129786389 + MTD LTR MaLR 381 419 0 4 866 2948 195 18 93 chrX 36863913 36864587 -129785709 + RLTR25A LTR ERVK 7 629 -474 4 866 664 215 76 24 chrX 36864688 36864898 -129785398 + MTD-int LTR MaLR 1038 1258 0 4 866 1641 256 43 5 chrX 36864898 36865294 -129785002 + MTD LTR MaLR 1 411 -8 4 866 3974 137 62 16 chrX 36865442 36865924 -129784372 - Lx3C LINE L1 -7 6969 6453 4 866 787 211 133 128 chrX 36865924 36866315 -129783981 + RLTR9C LTR ERVK 1 393 0 4 866 3974 137 62 16 chrX 36866315 36866522 -129783774 - Lx3C LINE L1 -524 6452 6248 4 866 333 0 0 0 chrX 36866643 36866680 -129783616 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 866 240 221 29 29 chrX 36866686 36866756 -129783540 - Lx8 LINE L1 -155 7318 7249 4 866 1236 159 116 4 chrX 36866773 36867006 -129783290 - RLTR22_Mur LTR ERVK 0 1848 1590 4 866 282 56 0 0 chrX 36867290 36867326 -129782970 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 866 4570 137 49 1 chrX 36867326 36868096 -129782200 - RLTR22_Mur LTR ERVK -1041 807 1 4 866 295 360 9 0 chrX 36868098 36868212 -129782084 - Lx8 LINE L1 -228 7245 7131 4 866 366 123 0 0 chrX 36868220 36868277 -129782019 + (TA)n Simple_repeat Simple_repeat 1 57 0 4 866 1625 303 32 22 chrX 36868300 36868900 -129781396 + Lx8 LINE L1 6332 6937 -536 4 866 580 305 0 13 chrX 36869900 36870056 -129780240 - Lx6 LINE L1 -976 6484 6331 4 866 1165 252 31 21 chrX 36870047 36870335 -129779961 + Lx6 LINE L1 6518 6808 -652 4 866 301 285 86 56 chrX 36870591 36870788 -129779508 + MIRb SINE MIR 64 266 -2 4 866 198 0 0 0 chrX 36871341 36871363 -129778933 + (T)n Simple_repeat Simple_repeat 1 22 0 4 866 1068 116 0 0 chrX 36871563 36871709 -129778587 + B1_Mus2 SINE Alu 2 147 0 4 866 414 301 75 0 chrX 36872063 36872262 -129778034 - L1M2 LINE L1 -1126 5017 4804 4 866 545 254 27 47 chrX 36872301 36872450 -129777846 - B1F SINE Alu -2 147 2 4 866 496 278 36 20 chrX 36872480 36872703 -129777593 - L1M2 LINE L1 -1377 4763 4535 4 866 1065 256 126 31 chrX 36872715 36873135 -129777161 - Lx9 LINE L1 -290 7354 6895 4 866 255 133 0 0 chrX 36873156 36873201 -129777095 + (TC)n Simple_repeat Simple_repeat 1 45 0 4 866 5734 251 49 58 chrX 36873203 36873488 -129776808 - Lx6 LINE L1 -4 7456 7159 5 866 2606 78 70 38 chrX 36873488 36873886 -129776410 - IAPLTR2a LTR ERVK 0 411 1 5 866 5734 251 49 58 chrX 36873886 36875015 -129775281 - Lx6 LINE L1 -302 7158 6047 5 866 978 128 0 0 chrX 36875015 36875156 -129775140 - B1_Mus1 SINE Alu -6 142 2 5 866 5734 251 49 58 chrX 36875156 36875441 -129774855 - Lx6 LINE L1 -1414 6046 5771 5 866 1656 303 31 58 chrX 36875434 36876195 -129774101 - Lx9 LINE L1 -747 6897 6157 4 866 22 0 0 0 chrX 36877060 36877082 -129773214 + AT_rich Low_complexity Low_complexity 1 22 0 5 866 4918 62 0 12 chrX 36878027 36878678 -129771618 - L1Md_F2 LINE L1 -12 6570 5928 5 866 15306 86 3 16 chrX 36878678 36880858 -129769438 + L1_Mm LINE L1 3170 5321 -562 5 866 1447 12 0 0 chrX 36881402 36881574 -129768722 - L1Md_T LINE L1 0 6582 6411 5 866 1320 197 54 35 chrX 36881666 36882069 -129768227 - RMER6C LTR ERVK 0 690 106 5 866 228 367 13 86 chrX 36882090 36882242 -129768054 + MIR SINE MIR 1 141 -121 5 866 839 311 58 18 chrX 36882574 36882849 -129767447 + B4 SINE B4 5 290 -2 5 866 333 285 105 13 chrX 36882977 36883130 -129767166 + L1MB5 LINE L1 5793 5959 -215 5 866 355 248 228 31 chrX 36883171 36883333 -129766963 + MLT-int LTR MaLR 380 573 -1162 5 866 25 0 0 0 chrX 36883437 36883462 -129766834 + AT_rich Low_complexity Low_complexity 1 25 0 5 866 750 104 0 0 chrX 36883586 36883692 -129766604 + L1_Mus3 LINE L1 5852 5957 -681 5 866 880 344 75 38 chrX 36883766 36884235 -129766061 + MLT-int LTR MaLR 1220 1705 -30 5 866 7285 148 25 15 chrX 36884484 36886693 -129763603 - Lx LINE L1 0 6654 4430 5 866 1542 240 8 54 chrX 36886712 36887072 -129763224 - Lx5 LINE L1 -7 7043 6699 5 866 294 50 0 0 chrX 36887072 36887112 -129763184 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 5 866 360 365 20 7 chrX 36887255 36887404 -129762892 + MLT1A1 LTR MaLR 252 402 -6 5 866 193 0 0 86 chrX 36887936 36887971 -129762325 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 5 866 739 67 9 21 chrX 36887972 36888096 -129762200 - B1_Mm SINE Alu 0 148 28 5 866 306 0 0 0 chrX 36889699 36889733 -129760563 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 5 866 15531 77 2 5 chrX 36889809 36891921 -129758375 + L1_Mm LINE L1 2649 4754 -1129 5 866 4985 88 8 6 chrX 36891940 36892646 -129757650 + L1Md_F2 LINE L1 5872 6579 -3 5 866 264 242 32 32 chrX 36892871 36892971 -129757325 - ORR1E LTR MaLR 0 379 262 5 866 225 0 0 0 chrX 36893209 36893234 -129757062 + (TTG)n Simple_repeat Simple_repeat 3 27 0 5 866 2235 349 45 78 chrX 36893264 36894322 -129755974 - ORR1E-int LTR MaLR -10 1570 1 5 866 1885 106 281 8 chrX 36894322 36894675 -129755621 - RLTR44B LTR ERVK 0 449 1 5 866 2235 355 43 89 chrX 36894675 36895341 -129754955 - ORR1E-int LTR MaLR -917 663 8 5 866 289 295 62 108 chrX 36895352 36895546 -129754750 - ORR1E LTR MaLR -6 353 169 5 866 402 21 0 0 chrX 36895592 36895639 -129754657 + (T)n Simple_repeat Simple_repeat 1 47 0 5 866 2140 66 0 10 chrX 36895806 36896096 -129754200 - L1Md_F2 LINE L1 -2 6580 6294 5 866 1127 74 6 0 chrX 36896284 36896460 -129753836 + (TC)n Simple_repeat Simple_repeat 2 178 0 5 866 423 0 0 0 chrX 36896460 36896506 -129753790 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 866 1302 178 99 11 chrX 36896606 36896890 -129753406 - Lx3B LINE L1 -749 6224 5916 5 866 189 0 0 0 chrX 36896892 36896913 -129753383 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5 866 30 0 0 0 chrX 36897045 36897075 -129753221 + AT_rich Low_complexity Low_complexity 1 30 0 5 866 478 331 104 70 chrX 36897085 36897413 -129752883 - MLT1I LTR MaLR 0 411 73 5 866 290 80 20 0 chrX 36897520 36897570 -129752726 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 5 866 477 276 86 5 chrX 36898852 36899038 -129751258 - Tigger7 DNA MER2_type -2 2489 2293 5 866 635 345 73 8 chrX 36899043 36899277 -129751019 + Tigger5 DNA MER2_type 2 250 -2156 5 866 779 271 31 13 chrX 36899291 36899515 -129750781 + Tigger5 DNA MER2_type 2179 2406 0 5 866 227 103 26 0 chrX 36899543 36899582 -129750714 + (TTTC)n Simple_repeat Simple_repeat 1 40 0 5 866 368 383 144 14 chrX 36899622 36900067 -129750229 + MLT2B2 LTR ERVL 1 503 -12 5 866 1093 331 118 4 chrX 36900084 36900548 -129749748 - Tigger7 DNA MER2_type -1936 555 39 5 866 21 71 0 0 chrX 36902414 36902456 -129747840 + AT_rich Low_complexity Low_complexity 1 42 0 5 866 3796 77 22 4 chrX 36903097 36903630 -129746666 + Lx3_Mus LINE L1 6457 6999 -10 5 866 358 239 149 3 chrX 36903755 36903858 -129746438 - MTE2a LTR MaLR 0 419 279 5 866 228 263 70 0 chrX 36903834 36903891 -129746405 - MTE2a LTR MaLR -244 135 75 5 866 1703 284 27 37 chrX 36903894 36904381 -129745915 + Lx5 LINE L1 6538 7019 -31 5 866 419 129 30 158 chrX 36904382 36904483 -129745813 + RLTR28B LTR ERVL 318 405 -76 5 866 21 0 0 0 chrX 36904736 36904757 -129745539 + AT_rich Low_complexity Low_complexity 1 21 0 5 866 480 18 0 0 chrX 36905554 36905611 -129744685 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 866 452 350 59 46 chrX 36906064 36906301 -129743995 - B4A SINE B4 0 292 53 5 866 279 303 133 33 chrX 36906427 36906608 -129743688 + L2 LINE L2 1560 1758 -1661 5 866 318 50 0 0 chrX 36906737 36906777 -129743519 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 866 225 242 40 40 chrX 36907088 36907187 -129743109 + L1MC5 LINE L1 7263 7361 -600 5 866 27 0 0 0 chrX 36907361 36907388 -129742908 + AT_rich Low_complexity Low_complexity 1 27 0 5 866 1363 246 101 70 chrX 36907395 36908079 -129742217 - Lx7 LINE L1 -20 7440 6783 5 866 2688 209 62 14 chrX 36908096 36908664 -129741632 - Lx7 LINE L1 -1091 6605 6011 5 866 426 256 117 55 chrX 36908665 36908810 -129741486 + ORR1D1 LTR MaLR 3 156 -218 5 866 2899 185 40 100 chrX 36908810 36909393 -129740903 + Lx4A LINE L1 6047 6610 -448 5 866 1167 62 7 0 chrX 36909393 36909538 -129740758 - B1_Mm SINE Alu 0 147 2 5 866 2899 185 40 100 chrX 36909538 36909656 -129740640 + Lx4A LINE L1 6611 6706 -352 5 866 6755 22 0 1 chrX 36909654 36910441 -129739855 + L1Md_F2 LINE L1 4801 5586 -297 5 866 7830 48 6 10 chrX 36910441 36911440 -129738856 + L1Md_F2 LINE L1 5587 6581 -1 5 866 220 353 24 40 chrX 36911466 36911590 -129738706 - L2 LINE L2 -482 2937 2816 5 866 1356 23 12 0 chrX 36911683 36911854 -129738442 + L1Md_F2 LINE L1 6409 6581 -1 5 866 384 22 0 0 chrX 36912320 36912365 -129737931 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 5 866 228 305 91 67 chrX 36912825 36912990 -129737306 - MIRb SINE MIR -46 222 54 5 866 240 111 0 0 chrX 36913265 36913301 -129736995 + (A)n Simple_repeat Simple_repeat 1 36 0 5 866 837 307 5 0 chrX 36914183 36914395 -129735901 + B3 SINE B2 1 213 -3 5 866 497 290 138 45 chrX 36914514 36914925 -129735371 - L1MEd LINE L1 -4855 1370 894 5 866 1002 275 54 35 chrX 36914948 36915261 -129735035 + ORR1E LTR MaLR 1 319 -40 5 866 2146 260 89 39 chrX 36915345 36915993 -129734303 + Lx7 LINE L1 5955 6635 -1061 5 866 7309 148 21 160 chrX 36915993 36916721 -129733575 - RLTR21 LTR ERVK 0 1572 1061 5 866 603 0 0 0 chrX 36916721 36916788 -129733508 + (TC)n Simple_repeat Simple_repeat 2 68 0 5 866 180 77 0 0 chrX 36916790 36916816 -129733480 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 866 7309 148 21 160 chrX 36916816 36917662 -129732634 - RLTR21 LTR ERVK -512 1060 252 5 866 1432 28 79 0 chrX 36917662 36917821 -129732475 + B2_Mm1a SINE B2 2 160 -33 5 866 207 0 0 0 chrX 36917821 36917844 -129732452 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 5 866 1432 28 79 0 chrX 36917844 36917862 -129732434 + B2_Mm1a SINE B2 161 191 -2 5 866 7309 148 21 160 chrX 36917862 36918054 -129732242 - RLTR21 LTR ERVK -1321 251 49 5 866 3110 242 32 73 chrX 36918073 36919001 -129731295 + Lx7 LINE L1 6631 7520 -176 5 866 2412 164 54 44 chrX 36919001 36919505 -129730791 + RLTR28 LTR ERVL 1 509 -15 5 866 288 0 0 0 chrX 36919528 36919560 -129730736 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 5 866 636 223 7 7 chrX 36919560 36919709 -129730587 + Lx7 LINE L1 7548 7696 0 5 866 671 35 12 0 chrX 36920646 36920732 -129729564 + (CA)n Simple_repeat Simple_repeat 2 88 0 5 866 333 0 0 0 chrX 36920732 36920768 -129729528 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 866 791 300 106 13 chrX 36921715 36922016 -129728280 - RMER5 LTR ERV1 -196 338 10 5 866 428 290 39 39 chrX 36922054 36922183 -129728113 + B3 SINE B2 87 215 -1 5 866 1934 136 14 66 chrX 36922419 36922766 -129727530 - ORR1A4 LTR MaLR 0 329 1 5 866 2090 162 110 30 chrX 36922766 36923437 -129726859 - ORR1A4-int LTR MaLR -191 1772 1002 5 866 319 332 50 62 chrX 36923600 36923841 -129726455 - L2a LINE L2 -136 3290 3053 5 866 21 0 0 0 chrX 36924275 36924296 -129726000 + AT_rich Low_complexity Low_complexity 1 21 0 5 866 198 136 0 0 chrX 36924598 36924642 -129725654 + (T)n Simple_repeat Simple_repeat 1 44 0 5 866 1293 232 24 110 chrX 36924958 36925630 -129724666 + RLTR18B LTR ERVK 14 484 -28 5 866 320 43 22 0 chrX 36925722 36925768 -129724528 + (GAAA)n Simple_repeat Simple_repeat 2 48 0 5 866 2178 264 11 76 chrX 36925828 36926549 -129723747 - Lx7 LINE L1 -329 7367 6694 5 866 409 208 17 71 chrX 36926930 36927023 -129723273 - L1MA9 LINE L1 -174 6117 6034 5 866 326 23 0 23 chrX 36927023 36927067 -129723229 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 5 866 907 110 0 42 chrX 36927067 36927209 -129723087 - B1_Mus2 SINE Alu -11 136 1 5 866 409 200 18 62 chrX 36927209 36927244 -129723052 - L1MA9 LINE L1 -279 6033 6001 5 866 23 54 0 0 chrX 36927275 36927312 -129722984 + AT_rich Low_complexity Low_complexity 1 37 0 5 866 492 132 0 11 chrX 36927365 36927457 -129722839 + L1_Mus3 LINE L1 6542 6632 -6 5 866 786 190 38 5 chrX 36927463 36927648 -129722648 + RCHARR1 DNA MER1_type 670 860 -114 5 866 322 232 90 10 chrX 36927731 36927831 -129722465 - MTEa LTR MaLR 0 379 272 5 866 358 276 17 50 chrX 36928037 36928216 -129722080 - Lx7 LINE L1 -13 7683 7511 5 866 1948 340 58 17 chrX 36928221 36929172 -129721124 - Lx8 LINE L1 -225 7248 6259 5 866 396 0 0 0 chrX 36929260 36929304 -129720992 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 866 22 0 0 0 chrX 36929726 36929748 -129720548 + AT_rich Low_complexity Low_complexity 1 22 0 5 866 3466 107 10 6 chrX 36930533 36931050 -129719246 - L1_Mus3 LINE L1 -257 6381 5863 5 866 1512 110 17 55 chrX 36931050 36931339 -129718957 + L1_Mus3 LINE L1 6361 6638 0 5 866 423 228 30 0 chrX 36931425 36931526 -129718770 - Lx2B LINE L1 -18 6982 6879 5 866 468 276 0 57 chrX 36931536 36931659 -129718637 - RLTR31_Mur LTR ERVK 0 553 438 5 866 4568 198 53 75 chrX 36931659 36931806 -129718490 + RMER3D-int LTR ERVK 1618 1763 -1079 5 866 266 0 29 0 chrX 36931806 36931840 -129718456 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 866 1089 73 0 0 chrX 36931840 36931977 -129718319 - B1_Mus1 SINE Alu -9 139 3 5 866 4568 198 53 75 chrX 36931977 36931997 -129718299 + RMER3D-int LTR ERVK 1764 1764 -1078 5 866 2568 89 0 16 chrX 36931997 36932372 -129717924 + L1Md_F2 LINE L1 6202 6570 -12 6 866 4568 198 53 75 chrX 36932372 36933454 -129716842 + RMER3D-int LTR ERVK 1764 2840 -2 5 866 993 180 224 20 chrX 36933455 36933852 -129716444 + RLTR31_Mur LTR ERVK 1 478 -75 5 866 484 243 10 0 chrX 36933906 36934009 -129716287 - Lx2B LINE L1 -116 6884 6781 5 866 289 329 65 0 chrX 36934074 36934247 -129716049 - L1M3 LINE L1 -2475 3665 3451 6 866 306 269 97 61 chrX 36934647 36934890 -129715406 + L1M4c LINE L1 2226 2478 -4856 6 866 255 385 24 6 chrX 36935121 36935288 -129715008 - Lx8 LINE L1 -204 7269 7100 6 866 22 35 0 0 chrX 36935474 36935503 -129714793 + AT_rich Low_complexity Low_complexity 1 29 0 6 866 268 234 9 27 chrX 36935658 36935768 -129714528 + (TATAA)n Simple_repeat Simple_repeat 2 109 0 6 866 922 147 157 0 chrX 36935787 36935978 -129714318 - Lx9 LINE L1 -202 7442 7222 6 866 354 220 220 23 chrX 36936132 36936346 -129713950 + L1M4c LINE L1 3443 3698 -3302 6 866 22 0 0 0 chrX 36936518 36936540 -129713756 + AT_rich Low_complexity Low_complexity 1 22 0 6 866 1158 267 107 47 chrX 36936570 36937085 -129713211 + Lx8 LINE L1 6923 7468 -5 6 866 551 273 41 58 chrX 36937345 36937516 -129712780 + RMER30 DNA MER1_type 8 175 -27 6 866 262 238 103 132 chrX 36938298 36938511 -129711785 + Charlie1b DNA MER1_type 317 523 0 6 866 295 51 0 0 chrX 36938515 36938554 -129711742 - B2_Mm2 SINE B2 -156 39 1 6 866 1884 194 58 0 chrX 36938563 36938953 -129711343 + ORR1B1 LTR MaLR 1 386 -8 6 866 28 91 0 0 chrX 36939100 36939177 -129711119 + AT_rich Low_complexity Low_complexity 1 77 0 6 866 375 260 21 0 chrX 36940198 36940294 -129710002 - RLTR17 LTR ERVK -97 595 498 6 866 693 288 5 43 chrX 36940293 36940357 -129709939 - RLTR17 LTR ERVK -311 381 324 6 866 1093 114 62 0 chrX 36940357 36940533 -129709763 - B2_Mm2 SINE B2 -8 187 1 6 866 693 248 185 72 chrX 36940533 36940726 -129709570 - RLTR17 LTR ERVK -369 323 105 6 866 459 0 0 0 chrX 36940737 36940788 -129709508 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 866 303 28 0 0 chrX 36940790 36940826 -129709470 + (GA)n Simple_repeat Simple_repeat 1 36 0 6 866 1774 173 26 161 chrX 36940910 36941517 -129708779 + RMER6C LTR ERVK 166 690 0 6 866 522 67 0 0 chrX 36942101 36942176 -129708120 + (CA)n Simple_repeat Simple_repeat 2 76 0 6 866 268 353 134 27 chrX 36942177 36942579 -129707717 + L2 LINE L2 1828 2272 -1147 6 866 8462 27 1 0 chrX 36942726 36943915 -129706381 - L1Md_T LINE L1 0 6582 5393 6 866 2628 191 15 9 chrX 36944323 36944847 -129705449 + RLTR11A2 LTR ERVK 1 527 0 6 866 307 403 68 5 chrX 36945362 36945569 -129704727 - RMER15 LTR ERVL -6 569 350 6 866 595 303 135 22 chrX 36945826 36946093 -129704203 - RMER15 LTR ERVL 0 575 279 6 866 38564 7 0 1 chrX 36947160 36953162 -129697134 + L1Md_A LINE L1 1 5586 -297 6 866 9034 2 0 0 chrX 36953162 36954158 -129696138 + L1Md_A LINE L1 5587 6582 0 6 866 36 0 0 0 chrX 36954333 36954369 -129695927 + AT_rich Low_complexity Low_complexity 1 36 0 6 866 281 324 19 38 chrX 36954409 36954515 -129695781 - RSINE1 SINE B4 -25 140 37 6 866 2297 204 39 27 chrX 36954551 36955070 -129695226 + RMER5 LTR ERV1 1 525 -9 6 866 188 86 29 0 chrX 36955691 36955726 -129694570 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 6 866 22 70 0 0 chrX 36955947 36955990 -129694306 + AT_rich Low_complexity Low_complexity 1 43 0 6 866 500 352 58 23 chrX 36956191 36956673 -129693623 + Lx9 LINE L1 7018 7516 -128 6 866 189 175 0 0 chrX 36956681 36956721 -129693575 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 866 3496 85 21 6 chrX 36956832 36957317 -129692979 + L1Md_F2 LINE L1 6091 6582 0 6 866 8954 134 29 1 chrX 36957563 36959004 -129691292 - Lx2A LINE L1 -9 6999 5522 6 866 1603 168 50 0 chrX 36958995 36959292 -129691004 + Lx2A LINE L1 5218 5529 -354 6 866 324 120 0 0 chrX 36961037 36961087 -129689209 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 866 5486 46 0 6 chrX 36961163 36961838 -129688458 + L1Md_F2 LINE L1 5898 6568 -14 6 108 3210 54 28 12 chrX 36962139 36962570 -129687726 + L1Md_F3 LINE L1 6147 6584 0 6 867 23 0 0 0 chrX 36963405 36963428 -129686868 + AT_rich Low_complexity Low_complexity 1 23 0 6 867 214 276 145 0 chrX 36964765 36964841 -129685455 - MIR SINE MIR -74 188 102 6 867 180 0 0 0 chrX 36965297 36965317 -129684979 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 867 27 49 0 0 chrX 36965447 36965488 -129684808 + AT_rich Low_complexity Low_complexity 1 41 0 6 867 219 69 0 0 chrX 36965634 36965663 -129684633 + (CAA)n Simple_repeat Simple_repeat 2 30 0 6 867 332 256 107 24 chrX 36965732 36965900 -129684396 + Lx5 LINE L1 6042 6223 -827 6 867 1233 257 54 51 chrX 36965899 36966288 -129684008 + Lx5 LINE L1 6648 7037 -13 6 867 522 67 0 0 chrX 36966288 36966363 -129683933 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 6 867 369 304 8 16 chrX 36966755 36966882 -129683414 + GA-rich Low_complexity Low_complexity 2 127 0 6 867 9856 65 9 9 chrX 36967082 36968381 -129681915 + L1_Mm LINE L1 4286 5586 -297 6 867 7671 67 5 0 chrX 36968381 36969371 -129680925 + L1Md_F2 LINE L1 5587 6581 -1 6 867 9856 65 9 9 chrX 36969371 36969387 -129680909 + L1_Mm LINE L1 5587 5601 -282 6 867 3656 101 4 2 chrX 36969376 36969893 -129680403 + L1Md_F2 LINE L1 5069 5586 -297 6 867 7044 83 11 11 chrX 36969894 36970889 -129679407 + L1Md_F2 LINE L1 5588 6582 0 6 867 195 189 0 0 chrX 36971094 36971147 -129679149 + (TA)n Simple_repeat Simple_repeat 1 53 0 6 867 22 0 0 0 chrX 36971373 36971395 -129678901 + AT_rich Low_complexity Low_complexity 1 22 0 6 867 7076 50 2 2 chrX 36971395 36972283 -129678013 - L1Md_F2 LINE L1 -2 6580 5689 6 867 573 139 40 34 chrX 36973339 36973488 -129676808 + RMER17B LTR ERVK 312 461 -497 6 867 217 0 29 29 chrX 36973489 36973523 -129676773 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 6 867 727 299 137 47 chrX 36973960 36974277 -129676019 - ORR1E LTR MaLR 0 379 18 6 867 1030 16 16 0 chrX 36974360 36974488 -129675808 + (TCTA)n Simple_repeat Simple_repeat 4 133 0 6 867 418 233 22 0 chrX 36974488 36974578 -129675718 - B1_Mur4 SINE Alu -11 139 48 6 867 617 222 71 11 chrX 36974737 36974919 -129675377 - Lx5 LINE L1 -1 7049 6857 6 867 6575 183 35 87 chrX 36974901 36976064 -129674232 - L1_Mur2 LINE L1 -687 5190 4102 6 867 2414 45 26 3 chrX 36976064 36976376 -129673920 - L1Md_F3 LINE L1 0 6584 6266 6 867 6575 183 35 87 chrX 36976376 36976922 -129673374 - L1_Mur2 LINE L1 -1776 4101 3571 6 867 6285 105 15 3 chrX 36976929 36977845 -129672451 - L1_Mus2 LINE L1 -4 6562 5636 6 867 16876 89 7 7 chrX 36977852 36980278 -129670018 - L1_Mus2 LINE L1 -1456 4427 2001 6 867 1722 15 0 0 chrX 36980280 36980482 -129669814 - L1Md_A LINE L1 0 6582 6381 6 867 20769 13 0 0 chrX 36980482 36983552 -129666744 - L1Md_A LINE L1 -3 6579 3510 6 867 6419 93 1 1 chrX 36983550 36985177 -129665119 - L1_Mus2 LINE L1 -3866 2017 390 6 867 22651 135 10 76 chrX 36985186 36986258 -129664038 - L1Md_F LINE L1 -521 5362 4604 6 867 791 93 8 0 chrX 36986258 36986376 -129663920 + (GAAAA)n Simple_repeat Simple_repeat 2 120 0 6 867 22651 135 10 76 chrX 36986376 36988603 -129661693 - L1Md_F LINE L1 -1280 4603 2363 6 867 215 61 30 0 chrX 36988603 36988636 -129661660 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 867 22651 151 34 52 chrX 36988636 36990354 -129659942 - L1Md_F LINE L1 -3521 2362 592 6 867 3980 128 12 6 chrX 36990354 36990998 -129659298 - L1_Mur2 LINE L1 -3183 2694 2047 6 867 8683 106 6 1 chrX 36991050 36992921 -129657375 + L1_Mus1 LINE L1 4681 6564 -3 6 867 3015 47 42 0 chrX 36993228 36993608 -129656688 - MTA_Mm LTR MaLR 0 396 1 6 867 986 268 108 31 chrX 36993610 36994091 -129656205 + Charlie2a DNA MER1_type 1851 2368 -493 6 867 314 288 75 67 chrX 36994134 36994387 -129655909 + Charlie2a DNA MER1_type 2505 2759 -102 6 867 12220 158 26 15 chrX 36994462 36997266 -129653030 + L1VL2 LINE L1 369 3201 -2682 6 867 4392 141 4 13 chrX 36997256 36998013 -129652283 + L1VL2 LINE L1 3570 4319 -1564 6 867 2375 120 3 31 chrX 36998013 36998401 -129651895 + L1_Mus1 LINE L1 6190 6566 -1 6 867 1235 171 129 42 chrX 36999254 36999319 -129650977 - Lx5 LINE L1 -671 6379 6307 6 867 333 0 0 0 chrX 36999319 36999356 -129650940 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 867 1235 171 129 42 chrX 36999356 36999601 -129650695 - Lx5 LINE L1 -744 6306 6042 6 867 984 251 9 0 chrX 37000652 37000871 -129649425 - Lx6 LINE L1 -13 7447 7227 1 867 2401 68 0 0 chrX 37001166 37001473 -129648823 + L1_Mus2 LINE L1 6260 6566 0 2 867 405 296 141 50 chrX 37001624 37002008 -129648288 - L1M4 LINE L1 -1679 4467 4049 3 867 1453 272 6 6 chrX 37002227 37002582 -129647714 - Lx5 LINE L1 -35 7015 6661 4 867 534 332 42 48 chrX 37002617 37003081 -129647215 + L1_Rod LINE L1 70 472 -6700 5 867 298 200 52 10 chrX 37003167 37003263 -129647033 + L1_Rod LINE L1 515 614 -6558 5 867 326 203 0 0 chrX 37003263 37003327 -129646969 + L1_Rod LINE L1 724 787 -6385 5 867 2830 152 13 7 chrX 37003331 37003782 -129646514 + Lx4A LINE L1 6142 6595 -463 6 867 7227 139 20 8 chrX 37003771 37004087 -129646209 + L1_Mus3 LINE L1 3881 4194 -1689 7 867 540 0 0 0 chrX 37004087 37004147 -129646149 + (TA)n Simple_repeat Simple_repeat 1 60 0 8 867 7227 139 20 8 chrX 37004147 37005047 -129645249 + L1_Mus3 LINE L1 4195 5111 -772 7 867 702 65 0 0 chrX 37005051 37005143 -129645153 + BC1_Mm scRNA scRNA 1 92 -60 9 867 624 144 0 0 chrX 37005146 37005243 -129645053 + L1_Mur2 LINE L1 5100 5196 -681 1 867 2755 148 0 5 chrX 37005243 37005676 -129644620 - RLTR10C LTR ERVK -3 433 3 1 867 4208 128 44 0 chrX 37005678 37005716 -129644580 + L1_Mus3 LINE L1 5197 5234 -649 7 867 414 0 0 0 chrX 37005716 37005762 -129644534 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 867 6856 118 20 9 chrX 37005762 37007135 -129643161 + L1_Mus3 LINE L1 5235 6638 0 7 867 5355 98 26 36 chrX 37007136 37007787 -129642509 - L1VL4 LINE L1 -1797 1762 1127 1 867 279 0 0 0 chrX 37007787 37007818 -129642478 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 867 5355 158 14 21 chrX 37007818 37008585 -129641711 - L1VL4 LINE L1 -2433 1126 355 1 867 2264 189 29 22 chrX 37008606 37009108 -129641188 - RLTR31_Mm LTR ERVK -112 580 1 1 867 365 113 41 27 chrX 37009159 37009232 -129641064 - Lx9 LINE L1 -157 7487 7414 1 867 574 325 47 71 chrX 37009233 37009641 -129640655 - L1M4c LINE L1 -2711 3671 3274 1 867 271 266 38 12 chrX 37009667 37009747 -129640549 - PB1D10 SINE Alu 0 117 36 1 867 869 192 211 0 chrX 37009831 37010096 -129640200 - Lx9 LINE L1 -26 7618 7298 1 867 707 184 26 26 chrX 37010096 37010247 -129640049 - Lx9 LINE L1 -482 7162 7012 1 867 480 254 39 22 chrX 37010263 37010444 -129639852 - L1MA9 LINE L1 -32 6280 6097 2 867 31 26 0 0 chrX 37010455 37010493 -129639803 + AT_rich Low_complexity Low_complexity 1 38 0 2 867 408 20 0 0 chrX 37010706 37010755 -129639541 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 867 4795 90 25 10 chrX 37010817 37011499 -129638797 - Lx3_Mus LINE L1 -18 6991 6300 2 867 415 310 156 11 chrX 37011648 37011834 -129638462 + ID_B1 SINE B4 3 215 -9 2 867 22 35 0 0 chrX 37011846 37011875 -129638421 + AT_rich Low_complexity Low_complexity 1 29 0 2 867 315 295 195 38 chrX 37012031 37012250 -129638046 - L1M4c LINE L1 -4832 1552 1298 1 867 374 0 22 0 chrX 37012250 37012296 -129638000 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 2 867 315 295 195 38 chrX 37012296 37012312 -129637984 - L1M4c LINE L1 -5087 1297 1281 1 867 3572 186 38 0 chrX 37012374 37013037 -129637259 - Lx4A LINE L1 -3 7055 6368 2 867 3840 136 58 63 chrX 37013037 37013814 -129636482 + Lx4A LINE L1 5458 6231 -827 2 867 1114 62 0 46 chrX 37013814 37013966 -129636330 + B1_Mm SINE Alu 3 147 0 2 867 3840 143 58 130 chrX 37013966 37014150 -129636146 + Lx4A LINE L1 6232 6374 -684 2 867 37874 30 0 0 chrX 37014328 37020786 -129629510 - L1Md_T LINE L1 0 6585 66 3 867 2057 32 0 0 chrX 37021018 37021264 -129629032 - L1Md_A LINE L1 0 6582 6337 3 867 390 21 0 0 chrX 37021492 37021539 -129628757 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 867 226 279 23 23 chrX 37022059 37022147 -129628149 + L1MA5 LINE L1 5943 6030 -270 3 867 1029 88 0 39 chrX 37022197 37022336 -129627960 + B1_Mm SINE Alu 1 138 -9 3 867 189 0 0 0 chrX 37022336 37022357 -129627939 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 3 867 1029 88 0 39 chrX 37022357 37022370 -129627926 + B1_Mm SINE Alu 139 147 0 3 867 564 15 0 0 chrX 37022947 37023012 -129627284 + (TA)n Simple_repeat Simple_repeat 1 65 0 3 867 216 0 0 0 chrX 37023012 37023035 -129627261 + (GA)n Simple_repeat Simple_repeat 2 25 0 3 867 739 362 60 0 chrX 37023749 37024017 -129626279 - Tigger7 DNA MER2_type -2178 313 30 3 867 859 336 17 14 chrX 37024527 37024817 -129625479 + B4A SINE B4 2 292 0 3 867 186 43 0 0 chrX 37024908 37024931 -129625365 + (T)n Simple_repeat Simple_repeat 1 23 0 4 867 1022 59 15 7 chrX 37024943 37025079 -129625217 - B1_Mm SINE Alu -10 137 1 4 867 1952 272 56 16 chrX 37025081 37025728 -129624568 - L1MB1 LINE L1 -67 6101 5429 4 867 3155 52 25 0 chrX 37025807 37026208 -129624088 - RLTR10A LTR ERVK 0 411 1 4 867 584 276 51 51 chrX 37026242 37026437 -129623859 + B3A SINE B2 1 195 -3 4 867 21 0 0 0 chrX 37026437 37026458 -129623838 + AT_rich Low_complexity Low_complexity 1 21 0 4 867 297 0 0 0 chrX 37026542 37026575 -129623721 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 867 353 326 93 29 chrX 37026632 37026771 -129623525 + B1F SINE Alu 1 148 -1 4 867 549 306 26 19 chrX 37026775 37027082 -129623214 - L1MB1 LINE L1 -1289 4851 4543 4 867 1126 298 33 44 chrX 37027144 37027353 -129622943 - MTE2b LTR MaLR 0 379 172 4 867 357 102 0 0 chrX 37027353 37027412 -129622884 + (TCTCTG)n Simple_repeat Simple_repeat 4 62 0 4 867 1126 298 33 44 chrX 37027412 37027567 -129622729 - MTE2b LTR MaLR -208 171 19 4 867 3050 298 79 130 chrX 37027587 37028662 -129621634 - MTE2b-int LTR MaLR -12 1568 599 4 867 1007 178 104 249 chrX 37028662 37029104 -129621192 - ORR1C1 LTR MaLR 0 378 1 5 867 3050 298 79 130 chrX 37029104 37029434 -129620862 - MTE2b-int LTR MaLR -982 598 260 4 867 905 71 53 79 chrX 37029434 37029586 -129620710 - B1_Mus1 SINE Alu 0 148 1 5 867 3050 298 79 130 chrX 37029586 37029831 -129620465 - MTE2b-int LTR MaLR -1321 259 1 4 867 863 301 75 33 chrX 37029836 37030142 -129620154 - MTE2b LTR MaLR 0 379 61 4 867 743 274 135 46 chrX 37030284 37030892 -129619404 - MTD-int LTR MaLR -405 853 1 5 867 961 297 123 19 chrX 37030904 37031213 -129619083 - MTD LTR MaLR -14 405 68 5 867 216 0 0 0 chrX 37031213 37031237 -129619059 + (CAA)n Simple_repeat Simple_repeat 1 24 0 5 867 961 297 123 19 chrX 37031237 37031294 -129619002 - MTD LTR MaLR -352 67 2 5 867 465 261 73 16 chrX 37031430 37031621 -129618675 - L1MB1 LINE L1 -3350 2790 2589 4 867 387 320 10 10 chrX 37031622 37031723 -129618573 - PB1 SINE Alu -4 123 23 5 867 368 238 85 23 chrX 37031745 37031874 -129618422 - L1MB1 LINE L1 -3540 2600 2464 4 867 36 40 0 0 chrX 37032280 37032330 -129617966 + AT_rich Low_complexity Low_complexity 1 50 0 5 867 5912 212 38 8 chrX 37032330 37033536 -129616760 - Lx5 LINE L1 -22 7028 5787 5 867 1634 178 19 35 chrX 37033543 37033845 -129616451 - L1_Mur2 LINE L1 -1093 4784 4488 5 867 6043 34 0 0 chrX 37033845 37034559 -129615737 - L1Md_A LINE L1 -1 6581 5868 5 867 1634 178 19 35 chrX 37034559 37034624 -129615672 - L1_Mur2 LINE L1 -1390 4487 4423 5 867 32442 81 2 0 chrX 37034617 37039917 -129610379 + L1Md_F2 LINE L1 276 5586 -297 5 867 8109 47 4 0 chrX 37039917 37040909 -129609387 + L1Md_F2 LINE L1 5587 6582 0 5 867 2268 179 61 18 chrX 37040933 37041444 -129608852 - L1_Mur2 LINE L1 -1440 4437 3905 5 867 9625 181 14 62 chrX 37041444 37042785 -129607511 - L1_Mur2 LINE L1 -2475 3402 2058 5 867 356 88 0 17 chrX 37042785 37042843 -129607453 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 867 9625 182 65 51 chrX 37042843 37044024 -129606272 - L1_Mur2 LINE L1 -3820 2057 901 5 867 396 275 111 30 chrX 37044910 37045045 -129605251 - B1_Mur1 SINE Alu -1 148 3 6 867 249 33 0 0 chrX 37045069 37045099 -129605197 + (T)n Simple_repeat Simple_repeat 1 30 0 6 867 1542 42 0 16 chrX 37045111 37045304 -129604992 - B2_Mm1t SINE B2 -3 190 1 6 867 22 0 0 0 chrX 37045315 37045337 -129604959 + AT_rich Low_complexity Low_complexity 1 22 0 6 867 273 123 15 30 chrX 37045616 37045683 -129604613 + (CATATA)n Simple_repeat Simple_repeat 5 70 0 6 867 2125 133 32 146 chrX 37045692 37046228 -129604068 - IAPLTR2_Mm LTR ERVK 0 475 1 6 867 6140 35 3 19 chrX 37046230 37046986 -129603310 - IAPEz-int LTR ERVK -2 6479 5736 6 867 2177 75 0 0 chrX 37046985 37047263 -129603033 - IAPEz-int LTR ERVK -4845 1636 1359 6 867 3395 85 26 36 chrX 37047263 37048095 -129602201 - IAPEz-int LTR ERVK -5819 662 9 6 867 1971 113 41 222 chrX 37048096 37048676 -129601620 - IAPLTR2_Mm LTR ERVK 0 475 1 6 867 489 34 0 0 chrX 37048676 37048735 -129601561 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 6 867 345 316 75 25 chrX 37048850 37049132 -129601164 - L1M2 LINE L1 -4245 2604 2309 6 867 232 419 36 22 chrX 37049138 37049277 -129601019 - RSINE1 SINE B4 -2 163 23 6 867 6416 37 5 0 chrX 37049277 37050052 -129600244 + L1Md_F3 LINE L1 5792 6570 -14 7 867 228 135 0 0 chrX 37050073 37050110 -129600186 + (GAAA)n Simple_repeat Simple_repeat 2 38 0 7 867 506 239 108 0 chrX 37050110 37050240 -129600056 + ID_B1 SINE B4 80 223 -1 7 867 3544 99 26 19 chrX 37050247 37050782 -129599514 + Lx LINE L1 6113 6651 -3 7 867 6761 123 6 30 chrX 37051420 37052062 -129598234 - Lx LINE L1 -9 6645 6013 7 867 2309 188 43 46 chrX 37052062 37052625 -129597671 - RLTR31_Mm LTR ERVK 0 561 1 7 867 6761 131 4 24 chrX 37052625 37053178 -129597118 - Lx LINE L1 -642 6012 5476 7 867 731 301 88 40 chrX 37054318 37055109 -129595187 - L1MA5 LINE L1 -463 5837 5008 7 867 2227 270 6 32 chrX 37055122 37055665 -129594631 - Lx7 LINE L1 -417 7279 6752 7 867 2140 116 0 71 chrX 37055665 37056017 -129594279 - ORR1A2 LTR MaLR 0 327 1 7 867 2227 270 6 32 chrX 37056017 37056094 -129594202 - Lx7 LINE L1 -945 6751 6675 7 867 1044 283 102 33 chrX 37056430 37056763 -129593533 + MTE2b LTR MaLR 1 356 -23 7 867 308 317 0 37 chrX 37056765 37056856 -129593440 + MTD LTR MaLR 3 89 -330 8 867 2753 53 20 62 chrX 37056856 37057256 -129593040 + MT2_Mm LTR ERVL 1 383 -110 8 867 2524 58 3 0 chrX 37057243 37057573 -129592723 - ORR1A0 LTR MaLR -15 331 1 8 867 1025 249 141 3 chrX 37057573 37057863 -129592433 + MTD LTR MaLR 87 417 -2 8 867 1417 42 0 0 chrX 37058011 37058178 -129592118 + L1Md_F2 LINE L1 5420 5586 -297 8 867 8029 55 1 0 chrX 37058178 37059277 -129591019 + L1Md_F2 LINE L1 5587 6582 0 8 867 407 311 93 62 chrX 37059446 37060231 -129590065 + L1MD LINE L1 3389 4197 -1949 8 867 361 270 75 86 chrX 37060633 37060888 -129589408 + L1M5 LINE L1 2869 3120 -3026 8 867 235 326 0 15 chrX 37061099 37061230 -129589066 + L1MA9 LINE L1 5182 5310 -830 8 867 236 195 296 59 chrX 37061243 37061412 -129588884 + L1MA7 LINE L1 6082 6290 -1 8 867 521 273 78 5 chrX 37061603 37061858 -129588438 + L1MA9 LINE L1 5519 5785 -404 8 867 432 295 40 0 chrX 37061896 37062045 -129588251 + L1MA9 LINE L1 5930 6084 -228 8 867 4315 74 0 5 chrX 37062056 37062612 -129587684 + L1Md_F2 LINE L1 6008 6560 -22 8 867 2884 122 39 0 chrX 37062614 37063056 -129587240 - L1Md_F LINE L1 -5926 593 135 8 867 3991 49 99 0 chrX 37063056 37063639 -129586657 + L1Md_F2 LINE L1 6002 6582 0 9 867 180 135 0 0 chrX 37063838 37063875 -129586421 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 867 315 188 85 24 chrX 37064161 37064243 -129586053 - MTEb LTR MaLR -9 370 284 9 867 504 316 105 50 chrX 37064802 37065002 -129585294 + B3A SINE B2 6 216 0 9 867 33 0 0 0 chrX 37065076 37065109 -129585187 + AT_rich Low_complexity Low_complexity 1 33 0 9 867 215 287 34 22 chrX 37065122 37065211 -129585085 + (TATATG)n Simple_repeat Simple_repeat 5 94 0 9 867 23 0 0 0 chrX 37065245 37065268 -129585028 + AT_rich Low_complexity Low_complexity 1 23 0 9 867 538 271 138 61 chrX 37065286 37065647 -129584649 + Charlie1a DNA MER1_type 267 655 -800 9 867 2093 142 47 3 chrX 37065866 37066246 -129584050 + Lx2 LINE L1 4931 5327 -550 9 867 650 226 44 39 chrX 37066745 37066792 -129583504 + ID SINE ID 32 79 -145 9 867 1027 60 0 8 chrX 37066792 37066926 -129583370 + B1_Mm SINE Alu 4 136 -11 1 867 613 0 26 0 chrX 37066932 37067009 -129583287 + (GA)n Simple_repeat Simple_repeat 2 80 0 1 867 6909 139 85 56 chrX 37067087 37068707 -129581589 + Lx2 LINE L1 5330 6996 -1 9 867 683 292 159 30 chrX 37068716 37069119 -129581177 + Charlie1a DNA MER1_type 773 1227 -228 9 867 1613 281 33 34 chrX 37069250 37069851 -129580445 - Lx5 LINE L1 -59 7401 6455 1 867 264 170 0 0 chrX 37069857 37069910 -129580386 + (TTTA)n Simple_repeat Simple_repeat 4 56 0 1 867 262 277 11 46 chrX 37069922 37070009 -129580287 - Lx5 LINE L1 -733 6727 6644 1 867 892 273 48 35 chrX 37070026 37070363 -129579933 + Lx6 LINE L1 6036 6421 -629 1 867 350 326 91 14 chrX 37070929 37071072 -129579224 + MER58A DNA MER1_type 45 198 -26 1 867 438 20 0 0 chrX 37071089 37071140 -129579156 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 867 502 264 149 0 chrX 37071146 37071354 -129578942 - Lx9 LINE L1 -181 7463 7225 1 867 333 163 48 67 chrX 37071359 37071464 -129578832 + Lx9 LINE L1 7542 7644 0 1 867 572 304 169 34 chrX 37071559 37071879 -129578417 - MLT1A0 LTR MaLR -2 363 1 1 867 2888 170 117 31 chrX 37071930 37072883 -129577413 + RLTR13D1 LTR ERVK 1 1023 0 1 867 296 297 0 0 chrX 37073272 37073373 -129576923 + Charlie15a DNA MER1_type 123 223 -1 1 867 4264 73 11 0 chrX 37073928 37074489 -129575807 - RLTR13D1 LTR ERVK -13 793 227 1 867 3302 109 35 26 chrX 37074462 37075000 -129575296 - RLTR13D1 LTR ERVK -359 543 1 1 867 229 288 0 40 chrX 37075314 37075390 -129574906 + MIRc SINE MIR 83 155 -113 1 867 249 33 0 0 chrX 37075390 37075420 -129574876 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 867 523 238 0 0 chrX 37075455 37075556 -129574740 + MTEa LTR MaLR 1 101 -278 1 867 312 276 90 180 chrX 37075595 37075917 -129574379 + MT2A LTR ERVL 233 525 -8 1 867 28 79 0 0 chrX 37076315 37076378 -129573918 + AT_rich Low_complexity Low_complexity 1 63 0 1 867 880 104 266 0 chrX 37076434 37076588 -129573708 - B2_Mm2 SINE B2 0 195 1 1 867 275 398 0 0 chrX 37077627 37077735 -129572561 - MER102a DNA MER1_type -7 323 216 1 867 2116 199 132 87 chrX 37077831 37078416 -129571880 - RMER19C LTR ERVK 0 611 1 1 867 241 419 8 0 chrX 37080022 37080151 -129570145 + MIR SINE MIR 23 152 -110 1 867 377 284 208 15 chrX 37080697 37081029 -129569267 - L1MB8 LINE L1 -50 6128 5733 1 867 23 0 0 0 chrX 37081103 37081126 -129569170 + AT_rich Low_complexity Low_complexity 1 23 0 1 867 1042 151 21 0 chrX 37081181 37081367 -129568929 + Lx LINE L1 6450 6639 -15 1 867 557 0 0 29 chrX 37081367 37081437 -129568859 + (GAA)n Simple_repeat Simple_repeat 2 69 0 1 867 370 244 28 73 chrX 37081443 37081620 -129568676 - L1MB8 LINE L1 -736 5442 5274 1 867 402 266 91 11 chrX 37081938 37082113 -129568183 - L1MB8 LINE L1 -1264 4882 4694 1 867 382 244 43 0 chrX 37082133 37082248 -129568048 - Lx9 LINE L1 -8 7636 7517 1 867 198 106 42 21 chrX 37082270 37082318 -129567978 + (TTATA)n Simple_repeat Simple_repeat 4 52 0 1 867 27 0 0 0 chrX 37082321 37082348 -129567948 + AT_rich Low_complexity Low_complexity 1 27 0 1 867 2737 217 24 10 chrX 37082407 37082998 -129567298 - Lx9 LINE L1 -179 7465 6867 1 867 2602 231 91 72 chrX 37083067 37083984 -129566312 - Lx9 LINE L1 -642 7002 5959 1 867 4849 190 28 7 chrX 37083989 37084952 -129565344 - Lx3C LINE L1 -2 6974 5992 1 867 2900 29 6 0 chrX 37084952 37085294 -129565002 + ORR1A0 LTR MaLR 1 344 -2 1 867 13217 49 6 38 chrX 37085310 37087157 -129563139 + ORR1A0-int LTR MaLR 6 1792 0 1 867 2968 38 0 0 chrX 37087157 37087503 -129562793 + ORR1A0 LTR MaLR 1 346 0 1 867 2515 131 2 40 chrX 37087504 37087985 -129562311 - Lx3C LINE L1 -981 5995 5535 1 867 1386 195 11 0 chrX 37087985 37088366 -129561930 + L1_Mur1 LINE L1 1046 1430 -2482 1 867 509 256 134 16 chrX 37088364 37088548 -129561748 - Lx9 LINE L1 -1667 5977 5734 1 867 327 49 0 0 chrX 37088548 37088589 -129561707 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 867 509 247 215 18 chrX 37088589 37088717 -129561579 - Lx9 LINE L1 -114 5733 5582 1 867 764 300 123 44 chrX 37088854 37089700 -129560596 - L1MB8 LINE L1 -2360 3786 2836 1 867 1139 120 11 5 chrX 37089700 37089884 -129560412 + L1_Mus3 LINE L1 6448 6632 -6 1 867 764 300 123 44 chrX 37089884 37089941 -129560355 - L1MB8 LINE L1 -3311 2835 2780 1 867 6949 65 10 0 chrX 37089941 37090825 -129559471 + RLTR13B1 LTR ERVK 1 893 0 1 867 764 300 123 44 chrX 37090825 37091227 -129559069 - L1MB8 LINE L1 -3367 2779 2378 1 867 733 325 10 5 chrX 37091342 37091540 -129558756 + B4 SINE B4 14 212 -80 1 867 244 297 14 0 chrX 37091575 37091649 -129558647 + (CATA)n Simple_repeat Simple_repeat 3 77 0 1 867 5065 77 14 1 chrX 37091782 37092495 -129557801 + L1Md_F2 LINE L1 2308 3014 -3042 1 108 13811 73 12 1 chrX 37092492 37094358 -129555938 + L1Md_F2 LINE L1 3872 5758 -298 1 868 7757 61 2 0 chrX 37094359 37095341 -129554955 + L1Md_F2 LINE L1 5760 6743 -12 1 868 242 191 0 0 chrX 37095699 37095746 -129554550 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 868 5090 72 0 6 chrX 37096018 37096688 -129553608 - L1Md_F2 LINE L1 -13 6569 5904 1 868 302 352 77 39 chrX 37097375 37097505 -129552791 - ID_B1 SINE B4 -6 218 84 1 868 365 356 0 9 chrX 37097401 37097506 -129552790 - B1_Mur3 SINE Alu -44 105 2 1 868 228 296 73 101 chrX 37097795 37097904 -129552392 + MER5A1 DNA MER1_type 56 161 -5 1 868 541 227 10 0 chrX 37098025 37098122 -129552174 + B3 SINE B2 2 99 -117 1 868 32 0 0 0 chrX 37098166 37098198 -129552098 + AT_rich Low_complexity Low_complexity 1 32 0 1 868 2698 160 106 25 chrX 37099307 37100065 -129550231 - RMER17B LTR ERVK 0 958 1 1 868 24 0 0 0 chrX 37100203 37100227 -129550069 + AT_rich Low_complexity Low_complexity 1 24 0 1 868 280 190 25 25 chrX 37100227 37100308 -129549988 - Lx8 LINE L1 -5 7468 7388 1 868 265 300 0 0 chrX 37100320 37100390 -129549906 - Lx8 LINE L1 -143 7330 7261 1 868 320 236 14 27 chrX 37100379 37100453 -129549843 - Lx8 LINE L1 -347 7126 7054 1 868 459 432 37 34 chrX 37100533 37100555 -129549741 + MLT1E2 LTR MaLR 225 246 -381 1 868 5164 70 53 1 chrX 37100555 37101252 -129549044 + L1_Mus2 LINE L1 5834 6566 0 1 868 459 432 37 34 chrX 37101252 37101526 -129548770 + MLT1E2 LTR MaLR 247 522 -105 1 868 229 125 138 35 chrX 37101942 37102000 -129548296 - Lx8 LINE L1 -2 7471 7408 1 868 541 227 10 0 chrX 37103122 37103219 -129547077 + B3 SINE B2 2 99 -117 1 868 32 0 0 0 chrX 37103263 37103295 -129547001 + AT_rich Low_complexity Low_complexity 1 32 0 1 868 606 310 102 47 chrX 37104958 37105300 -129544996 - RMER15 LTR ERVL -3 572 212 1 868 249 33 0 0 chrX 37105661 37105691 -129544605 + (ATG)n Simple_repeat Simple_repeat 2 31 0 1 868 970 297 100 11 chrX 37106593 37106974 -129543322 - Lx8 LINE L1 -5 7468 7054 1 868 348 304 146 0 chrX 37106966 37107137 -129543159 + Lx8 LINE L1 6891 7086 -387 1 868 956 108 7 0 chrX 37107715 37107863 -129542433 + (GGA)n Simple_repeat Simple_repeat 3 151 0 1 868 279 152 0 0 chrX 37108378 37108424 -129541872 - Lx9 LINE L1 -644 7000 6955 1 868 335 73 18 0 chrX 37108426 37108481 -129541815 + (TTG)n Simple_repeat Simple_repeat 2 57 0 1 868 695 156 16 16 chrX 37108481 37108605 -129541691 - B1_Mus2 SINE Alu -3 144 21 1 868 2121 236 98 6 chrX 37108611 37109151 -129541145 - Lx9 LINE L1 -719 6925 6336 1 868 895 108 65 12 chrX 37109153 37109322 -129540974 + L1_Mus3 LINE L1 6461 6638 0 1 868 22203 78 11 4 chrX 37109344 37111773 -129538523 + L1Md_F2 LINE L1 2801 5251 -632 1 868 715 108 0 16 chrX 37111773 37111895 -129538401 + (TA)n Simple_repeat Simple_repeat 1 120 0 1 868 10696 72 21 1 chrX 37111895 37112230 -129538066 + L1Md_F2 LINE L1 5252 5586 -297 1 868 7261 84 1 20 chrX 37112231 37113242 -129537054 + L1Md_F2 LINE L1 5588 6579 -3 1 868 234 116 0 0 chrX 37113261 37113304 -129536992 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 868 407 312 19 67 chrX 37113381 37113752 -129536544 + Lx9 LINE L1 5873 6225 -1419 1 868 1236 222 69 21 chrX 37113738 37114116 -129536180 + Lx9 LINE L1 7235 7630 -14 1 868 637 299 117 43 chrX 37114126 37114511 -129535785 + L1MCa LINE L1 965 1389 -5119 1 868 267 31 0 0 chrX 37114511 37114543 -129535753 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 868 637 299 117 43 chrX 37114543 37114668 -129535628 + L1MCa LINE L1 1390 1513 -4995 1 868 2086 284 43 13 chrX 37114675 37115286 -129535010 + Lx8 LINE L1 6638 7266 -207 1 868 345 209 0 0 chrX 37115290 37115357 -129534939 + RLTR18B LTR ERVK 247 313 -199 1 868 834 226 7 0 chrX 37115370 37115525 -129534771 + RLTR18B LTR ERVK 357 512 0 1 868 565 249 82 52 chrX 37115615 37115848 -129534448 + Lx5 LINE L1 5986 6225 -825 1 868 370 312 23 23 chrX 37116082 37116256 -129534040 + L1_Mur3 LINE L1 3694 3867 -2013 1 868 285 29 0 0 chrX 37116272 37116306 -129533990 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 868 1022 243 28 154 chrX 37116397 37116825 -129533471 + ORR1D1 LTR MaLR 1 374 0 1 868 5286 50 3 5 chrX 37116862 37117532 -129532764 - L1Md_F3 LINE L1 -1 6583 5915 1 868 348 291 0 0 chrX 37117595 37117674 -129532622 - Lx8 LINE L1 -198 7275 7197 1 868 302 308 51 0 chrX 37117811 37117967 -129532329 + L1MCa LINE L1 1964 2127 -4381 1 868 396 304 145 43 chrX 37118604 37119534 -129530762 + L1MCa LINE L1 3805 4851 -1470 1 868 1457 298 39 24 chrX 37120146 37120613 -129529683 - Lx7 LINE L1 -449 7247 6774 1 868 2725 108 27 2 chrX 37120635 37121045 -129529251 + Lx3A LINE L1 6327 6746 -235 1 868 552 203 33 87 chrX 37121045 37121215 -129529081 - ORR1A4 LTR MaLR -168 216 3 1 868 235 243 68 0 chrX 37121215 37121289 -129529007 - L1_Mur3 LINE L1 -3651 2229 2151 1 868 911 144 69 5 chrX 37121300 37121488 -129528808 + Lx3B LINE L1 6771 6970 -3 1 868 1684 315 44 40 chrX 37121511 37122195 -129528101 - Lx7 LINE L1 -915 6781 6095 1 868 781 313 74 12 chrX 37122192 37122528 -129527768 - Lx8 LINE L1 -343 7130 6774 1 868 244 220 40 0 chrX 37122520 37122570 -129527726 - Lx8 LINE L1 -849 6624 6573 1 868 474 297 202 2 chrX 37122602 37123017 -129527279 + L1MC3 LINE L1 4755 5252 -894 1 868 1221 316 42 28 chrX 37123127 37123778 -129526518 + L1MC3 LINE L1 5565 6224 -1561 1 868 188 86 29 0 chrX 37123802 37123837 -129526459 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 868 554 276 70 7 chrX 37123838 37123980 -129526316 + MTE2b LTR MaLR 15 165 -214 1 868 7208 102 18 2 chrX 37123980 37125116 -129525180 + L1_Mus4 LINE L1 5470 6623 -13 1 868 868 258 96 74 chrX 37125163 37125627 -129524669 - MT2A LTR ERVL 0 601 1 1 868 477 162 48 0 chrX 37125627 37125732 -129524564 - MERVL_2A-int LTR ERVL 0 5761 5652 1 868 5060 63 15 10 chrX 37126006 37126683 -129523613 + L1Md_F2 LINE L1 5902 6581 -1 1 868 255 279 84 28 chrX 37126854 37126961 -129523335 + L1MC2 LINE L1 5998 6110 -234 1 868 25 83 0 0 chrX 37127068 37127128 -129523168 + AT_rich Low_complexity Low_complexity 1 60 0 1 868 2416 219 95 47 chrX 37127392 37127561 -129522735 - Lx9 LINE L1 -174 7470 7284 1 868 3477 18 2 0 chrX 37127561 37127956 -129522340 - MTA_Mm LTR MaLR 0 396 1 1 868 8926 42 4 1 chrX 37127956 37129051 -129521245 - MTA_Mm-int LTR MaLR 0 1098 1 1 868 4376 10 2 12 chrX 37129053 37129551 -129520745 - MT2_Mm LTR ERVL 0 493 1 1 868 2416 219 95 47 chrX 37129551 37130018 -129520278 - Lx9 LINE L1 -361 7283 6800 1 868 204 40 0 0 chrX 37130018 37130043 -129520253 + (TTA)n Simple_repeat Simple_repeat 1 25 0 1 868 6083 127 74 2 chrX 37130043 37131133 -129519163 - L1_Mus4 LINE L1 -16 6620 5455 1 868 1730 157 23 26 chrX 37131135 37131240 -129519056 + L1_Mm LINE L1 5129 5232 -651 1 868 468 0 0 0 chrX 37131240 37131292 -129519004 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 868 1730 157 23 26 chrX 37131292 37131532 -129518764 + L1_Mm LINE L1 5233 5473 -410 1 868 798 243 6 0 chrX 37131519 37131688 -129518608 - Lx9 LINE L1 -858 6786 6617 1 868 686 209 14 14 chrX 37133374 37133515 -129516781 + B1_Mm SINE Alu 2 142 -5 1 868 243 0 0 0 chrX 37133521 37133548 -129516748 + (ATG)n Simple_repeat Simple_repeat 1 27 0 1 868 630 39 0 0 chrX 37133571 37133648 -129516648 + (GGAA)n Simple_repeat Simple_repeat 1 77 0 1 868 357 114 0 91 chrX 37133648 37133725 -129516571 + B1_Mur3 SINE Alu 79 148 -1 2 868 300 91 0 0 chrX 37133753 37133797 -129516499 + (GGA)n Simple_repeat Simple_repeat 2 45 0 2 868 210 209 93 0 chrX 37133858 37133901 -129516395 + B1F2 SINE Alu 3 49 -100 2 868 186 276 168 25 chrX 37134061 37134180 -129516116 + MIR SINE MIR 97 232 -30 2 868 347 45 0 0 chrX 37134218 37134262 -129516034 - L1_Mus4 LINE L1 -764 5872 5829 2 868 831 110 59 9 chrX 37134230 37134383 -129515913 + Lx LINE L1 5841 5996 -658 2 868 232 154 39 0 chrX 37134386 37134438 -129515858 + T-rich Low_complexity Low_complexity 1 54 0 2 868 1054 58 0 7 chrX 37134438 37134577 -129515719 - B1_Mus1 SINE Alu -1 147 10 2 868 4000 162 14 0 chrX 37134581 37135236 -129515060 + Lx LINE L1 5984 6647 -7 2 868 494 372 28 28 chrX 37136122 37136371 -129513925 + Tigger7 DNA MER2_type 7 255 -2236 2 868 800 326 83 19 chrX 37136527 37136871 -129513425 - MTE2b LTR MaLR -5 414 1 2 868 353 271 290 0 chrX 37137056 37137211 -129513085 - B3 SINE B2 0 216 17 2 868 319 332 87 16 chrX 37137232 37137497 -129512799 - Lx7 LINE L1 -440 5728 5476 2 868 29254 89 7 16 chrX 37137493 37142448 -129507848 - L1Md_F2 LINE L1 -1 6581 1672 2 868 775 78 0 0 chrX 37142447 37142549 -129507747 - L1Md_F2 LINE L1 -6074 542 441 2 868 18537 188 92 22 chrX 37142543 37147876 -129502420 - L1_Mus2 LINE L1 -405 6161 403 2 868 2761 43 0 9 chrX 37147876 37148206 -129502090 + IAPLTR2b LTR ERVK 1 327 0 2 868 1569 255 106 126 chrX 37148206 37148400 -129501896 - L1_Mus2 LINE L1 -6236 402 245 2 868 21 0 0 0 chrX 37148494 37148515 -129501781 + AT_rich Low_complexity Low_complexity 1 21 0 2 868 2399 128 30 2 chrX 37148518 37148911 -129501385 + Lx LINE L1 5044 5447 -430 2 868 2770 21 17 183 chrX 37149267 37149732 -129500564 + RLTR10 LTR ERVK 1 388 -2 2 868 5150 165 60 20 chrX 37150450 37151852 -129498444 + Lx LINE L1 5441 6958 -39 2 868 239 304 48 7 chrX 37151898 37152044 -129498252 + L1M5 LINE L1 3831 3982 -2164 2 868 393 307 83 66 chrX 37152057 37152101 -129498195 + L1M2 LINE L1 3907 3953 -1927 2 868 1091 116 0 0 chrX 37152101 37152248 -129498048 + B1_Mus2 SINE Alu 1 147 0 2 868 369 0 0 0 chrX 37152248 37152289 -129498007 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 868 406 285 72 38 chrX 37152289 37152595 -129497701 + L1M2 LINE L1 3954 4277 -1863 2 868 216 0 0 0 chrX 37152595 37152619 -129497677 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 868 406 292 75 47 chrX 37152619 37152677 -129497619 + L1M2 LINE L1 4248 4322 -1558 2 868 317 82 0 20 chrX 37152768 37152818 -129497478 + (TAAAA)n Simple_repeat Simple_repeat 3 51 0 2 868 625 107 9 18 chrX 37152819 37152933 -129497363 + (GAGAA)n Simple_repeat Simple_repeat 3 115 0 2 868 5712 130 47 16 chrX 37153270 37154230 -129496066 + Lx3B LINE L1 5982 6971 -2 2 868 549 294 99 8 chrX 37154288 37154641 -129495655 + L1M2 LINE L1 4450 4834 -1309 2 868 1653 212 97 0 chrX 37154655 37154994 -129495302 - ORR1C2 LTR MaLR 0 384 13 2 868 1133 71 0 0 chrX 37155012 37155152 -129495144 - B1_Mus1 SINE Alu -8 140 1 2 868 228 65 0 0 chrX 37155152 37155183 -129495113 - ORR1C2 LTR MaLR -353 31 1 2 868 789 300 50 38 chrX 37155192 37155687 -129494609 + L1M2 LINE L1 4852 5352 -791 2 868 252 417 16 0 chrX 37155830 37155957 -129494339 + MIRb SINE MIR 37 165 -103 2 868 693 300 12 0 chrX 37156071 37156231 -129494065 - RSINE1 SINE B4 -2 163 2 2 868 21 0 0 0 chrX 37156688 37156709 -129493587 + AT_rich Low_complexity Low_complexity 1 21 0 2 868 28 29 0 0 chrX 37157570 37157605 -129492691 + AT_rich Low_complexity Low_complexity 1 35 0 2 868 1557 212 93 152 chrX 37157708 37158269 -129492027 + RLTR11A LTR ERVK 1 528 0 2 868 475 118 12 12 chrX 37158433 37158519 -129491777 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 2 868 280 143 0 0 chrX 37158617 37158659 -129491637 + L1_Mus4 LINE L1 6245 6286 -350 2 868 35151 49 0 4 chrX 37158659 37164133 -129486163 + L1Md_T LINE L1 41 5589 -297 2 868 8055 38 17 0 chrX 37164134 37165112 -129485184 + L1Md_T LINE L1 5591 6585 0 2 868 2420 105 14 3 chrX 37165112 37165464 -129484832 + L1_Mus4 LINE L1 6271 6626 -10 2 868 809 294 41 48 chrX 37165840 37166154 -129484142 - RMER5 LTR ERV1 0 534 223 2 868 983 292 93 31 chrX 37166167 37166494 -129483802 + MTE2b LTR MaLR 1 346 -33 2 868 5725 35 4 0 chrX 37166494 37167184 -129483112 - L1Md_F3 LINE L1 -1 6583 5891 2 868 983 292 93 31 chrX 37167184 37167209 -129483087 + MTE2b LTR MaLR 347 375 -4 2 868 237 283 81 126 chrX 37167218 37167392 -129482904 - RMER5 LTR ERV1 -325 209 44 2 868 8175 41 0 1 chrX 37169092 37170182 -129480114 - L1Md_T LINE L1 0 6582 5494 2 868 227 292 143 22 chrX 37170598 37170689 -129479607 - B1F SINE Alu -38 111 10 2 868 643 262 49 18 chrX 37171071 37171234 -129479062 - MTD LTR MaLR -53 366 199 2 868 3673 128 151 0 chrX 37171258 37171896 -129478400 - L1_Mus4 LINE L1 -7 6629 5896 2 868 1384 266 72 12 chrX 37171902 37172114 -129478182 - Lx8 LINE L1 -130 7343 7124 2 868 423 0 0 0 chrX 37172114 37172161 -129478135 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 868 1384 266 72 12 chrX 37172161 37172366 -129477930 - Lx8 LINE L1 -350 7123 6903 2 868 26 88 0 0 chrX 37172572 37172640 -129477656 + AT_rich Low_complexity Low_complexity 1 68 0 2 868 356 325 23 12 chrX 37173425 37173596 -129476700 + L1MA6 LINE L1 5952 6124 -176 2 868 262 301 50 29 chrX 37173629 37173720 -129476576 + B1F SINE Alu 16 105 -15 2 868 1804 185 11 35 chrX 37173732 37174079 -129476217 + ORR1B1 LTR MaLR 47 385 -9 2 868 23 33 0 0 chrX 37174299 37174329 -129475967 + AT_rich Low_complexity Low_complexity 1 30 0 2 868 23 0 0 0 chrX 37174423 37174446 -129475850 + AT_rich Low_complexity Low_complexity 1 23 0 2 868 513 183 32 0 chrX 37174782 37174875 -129475421 - Lx8 LINE L1 -800 6673 6578 2 868 348 310 23 0 chrX 37175329 37175416 -129474880 + B3A SINE B2 6 94 -104 2 868 1873 91 11 0 chrX 37175422 37175687 -129474609 + L1_Mus3 LINE L1 6275 6542 -96 2 868 508 193 39 48 chrX 37175769 37175940 -129474356 - ORR1D1 LTR MaLR 0 374 162 2 868 1006 254 67 25 chrX 37176160 37176443 -129473853 - ORR1D1 LTR MaLR -77 297 3 2 868 235 360 63 0 chrX 37176818 37176929 -129473367 - MLT1N2 LTR MaLR 0 562 445 2 868 28 0 0 0 chrX 37177440 37177468 -129472828 + AT_rich Low_complexity Low_complexity 1 28 0 2 868 345 292 103 10 chrX 37177537 37177634 -129472662 - RSINE1 SINE B4 -56 109 4 2 868 4678 251 103 19 chrX 37177667 37178929 -129471367 - Lx6 LINE L1 -9 7451 6084 2 868 255 316 133 25 chrX 37179116 37179236 -129471060 - L2a LINE L2 -16 3410 3278 2 868 500 298 45 86 chrX 37179573 37179771 -129470525 - MTE2a LTR MaLR -189 190 1 2 868 400 423 9 9 chrX 37179780 37180009 -129470287 + MLT1G1 LTR MaLR 227 455 -124 2 868 512 152 10 0 chrX 37180266 37180365 -129469931 + (TA)n Simple_repeat Simple_repeat 2 101 0 2 868 5357 5 0 0 chrX 37180696 37181291 -129469005 - L1Md_A LINE L1 0 6582 5988 2 868 2367 140 35 0 chrX 37181732 37182126 -129468170 + L1_Mus4 LINE L1 6223 6630 -6 2 868 877 237 25 5 chrX 37182530 37182729 -129467567 - B3 SINE B2 -13 203 1 2 868 750 128 7 7 chrX 37182870 37183019 -129467277 - L1_Mus4 LINE L1 -3 6633 6485 2 868 4401 132 4 11 chrX 37183040 37184045 -129466251 + L1_Mus4 LINE L1 5234 6231 -405 2 868 192 111 0 0 chrX 37184479 37184515 -129465781 + (T)n Simple_repeat Simple_repeat 1 36 0 2 868 2042 131 61 0 chrX 37184521 37184864 -129465432 - Lx LINE L1 -7 6647 6284 2 868 1094 240 64 32 chrX 37185387 37185693 -129464603 - Lx5 LINE L1 -4 7054 6690 2 868 4502 194 55 0 chrX 37185755 37186902 -129463394 - Lx5 LINE L1 -954 6096 4882 2 868 2738 232 21 0 chrX 37186927 37187495 -129462801 + Lx5 LINE L1 6470 7049 -1 2 868 830 245 109 34 chrX 37187547 37187961 -129462335 - Lx7 LINE L1 0 7696 7252 2 868 3567 126 119 5 chrX 37187953 37188559 -129461737 + Lx LINE L1 5973 6647 -7 2 868 3540 264 21 41 chrX 37188559 37188832 -129461464 - Lx7 LINE L1 -430 7266 7024 2 868 1188 75 0 0 chrX 37188832 37188992 -129461304 + (TTTC)n Simple_repeat Simple_repeat 2 161 0 2 868 3540 264 21 41 chrX 37188992 37189655 -129460641 - Lx7 LINE L1 -673 7023 6348 2 868 32994 91 8 1 chrX 37189651 37190396 -129459900 - L1_Mus1 LINE L1 -575 5992 5244 2 868 423 0 0 0 chrX 37190396 37190443 -129459853 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 868 32994 103 10 9 chrX 37190443 37195280 -129455016 - L1_Mus1 LINE L1 -640 5243 404 2 868 2052 213 105 19 chrX 37195271 37195840 -129454456 - L1Md_F LINE L1 -5478 1041 424 2 868 2597 158 43 6 chrX 37195897 37196380 -129453916 - Lx5 LINE L1 -1445 4432 3932 2 868 6075 162 25 25 chrX 37196375 37197592 -129452704 + L1_Mur2 LINE L1 3484 4701 -1176 2 868 441 50 0 0 chrX 37197595 37197655 -129452641 + (CAAAAA)n Simple_repeat Simple_repeat 4 63 0 2 868 12568 114 61 5 chrX 37197709 37199555 -129450741 + Lx LINE L1 393 2340 -1574 2 868 3478 140 42 2 chrX 37199555 37200126 -129450170 + L1_Mus4 LINE L1 6037 6630 -6 2 868 12568 146 131 5 chrX 37200126 37203457 -129446839 + Lx LINE L1 2341 6646 -8 2 868 225 0 0 0 chrX 37203508 37203533 -129446763 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 868 707 291 147 23 chrX 37203600 37204261 -129446035 + L1MA8 LINE L1 4619 5379 -933 2 868 576 0 0 0 chrX 37204261 37204325 -129445971 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 2 868 690 287 68 52 chrX 37204325 37204656 -129445640 + L1MA8 LINE L1 5380 5718 -594 2 868 321 299 14 20 chrX 37204851 37204998 -129445298 + L1M1 LINE L1 5475 5620 -680 2 868 646 242 206 20 chrX 37205081 37205363 -129444933 - ORR1D1 LTR MaLR -8 366 34 2 868 335 280 77 36 chrX 37205368 37205564 -129444732 + L1MA8 LINE L1 5734 5937 -354 2 868 212 388 48 58 chrX 37206297 37206486 -129443810 - MIRb SINE MIR -72 196 10 2 868 333 349 53 48 chrX 37206497 37206705 -129443591 - MIRb SINE MIR -40 228 20 2 868 4358 161 71 8 chrX 37206930 37207765 -129442531 + L1_Mur2 LINE L1 3888 4774 -1103 2 868 295 350 0 47 chrX 37207774 37207790 -129442506 + ID_B1 SINE B4 81 221 -1 2 868 314 349 38 23 chrX 37207790 37207922 -129442374 + B1F SINE Alu 16 149 0 2 868 654 199 45 8 chrX 37208007 37208139 -129442157 - B1_Mur3 SINE Alu 0 149 13 2 868 581 351 74 21 chrX 37208594 37208879 -129441417 - RMER15 LTR ERVL 0 575 276 2 868 216 224 20 0 chrX 37209227 37209276 -129441020 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 2 868 623 235 7 75 chrX 37210140 37210248 -129440048 - B1_Mur2 SINE Alu 0 149 44 2 868 5730 137 121 6 chrX 37210248 37211245 -129439051 + RLTR13D3 LTR ERVK 3 1114 0 2 868 623 235 7 75 chrX 37211245 37211283 -129439013 - B1_Mur2 SINE Alu -106 43 13 2 868 333 0 0 0 chrX 37211366 37211403 -129438893 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 868 3001 116 78 0 chrX 37211415 37211890 -129438406 - L1_Mus3 LINE L1 -2 6636 6125 2 868 3090 54 18 0 chrX 37211942 37212331 -129437965 + MTA_Mm LTR MaLR 1 396 0 2 868 299 330 17 35 chrX 37212786 37212902 -129437394 - Lx8 LINE L1 -899 6574 6461 2 868 603 256 12 42 chrX 37212863 37213030 -129437266 + Lx8 LINE L1 6637 6798 -675 2 868 394 250 68 0 chrX 37213041 37213129 -129437167 + RSINE1 SINE B4 11 104 -61 3 868 2352 254 65 19 chrX 37213208 37213855 -129436441 + Lx8 LINE L1 6793 7469 -4 2 868 1717 100 8 0 chrX 37214115 37214365 -129435931 - L1_Mus4 LINE L1 -2 6634 6383 3 868 450 36 0 0 chrX 37214463 37214519 -129435777 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 868 396 0 0 0 chrX 37214567 37214611 -129435685 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 868 452 208 167 0 chrX 37214743 37214839 -129435457 - PB1D9 SINE Alu -6 114 3 3 868 522 206 0 104 chrX 37214839 37214922 -129435374 - B4 SINE B4 -207 85 24 3 868 3952 22 0 0 chrX 37214938 37215391 -129434905 - L1Md_F2 LINE L1 -14 6568 6116 3 868 433 252 77 28 chrX 37216981 37217124 -129433172 + ORR1D1 LTR MaLR 225 374 0 3 868 234 200 16 16 chrX 37217237 37217298 -129432998 + L1MDb LINE L1 1242 1302 -5107 3 868 383 355 29 0 chrX 37217317 37217455 -129432841 - B3 SINE B2 -5 211 70 3 868 8377 126 26 12 chrX 37217459 37218946 -129431350 - Lx3A LINE L1 -6 6975 5478 3 868 864 301 11 36 chrX 37218947 37219306 -129430990 + MTEa-int LTR MaLR 1218 1567 -13 3 868 624 286 137 29 chrX 37219308 37219650 -129430646 + MTEa LTR MaLR 1 379 0 3 868 2055 315 65 54 chrX 37220261 37221315 -129428981 + Lx5 LINE L1 5967 7031 -19 3 868 31 26 0 0 chrX 37221459 37221497 -129428799 + AT_rich Low_complexity Low_complexity 1 38 0 3 868 483 48 0 0 chrX 37221722 37221784 -129428512 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 868 230 333 144 29 chrX 37222029 37222168 -129428128 + MLT1A0 LTR MaLR 211 365 0 3 868 4005 248 35 13 chrX 37223090 37223276 -129427020 - Lx6 LINE L1 -12 7448 7254 3 868 351 0 0 0 chrX 37223276 37223315 -129426981 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 868 4005 248 35 13 chrX 37223315 37224061 -129426235 - Lx6 LINE L1 -207 7253 6496 3 868 313 133 267 0 chrX 37224067 37224142 -129426154 - L1_Mur3 LINE L1 -1858 4022 3928 3 868 325 83 17 0 chrX 37224139 37224199 -129426097 + L1Md_F2 LINE L1 6522 6582 0 3 108 6201 192 75 58 chrX 37224200 37226008 -129424288 - L1_Mur3 LINE L1 -1954 3926 2088 3 869 437 230 76 63 chrX 37226096 37226319 -129423977 + Lx9 LINE L1 7412 7637 -7 3 869 3326 117 4 10 chrX 37226468 37226969 -129423327 - L1_Mus4 LINE L1 -1 6635 6138 3 869 658 140 61 0 chrX 37226969 37227083 -129423213 + B1_Mus1 SINE Alu 28 148 0 3 869 13305 162 15 61 chrX 37227094 37230414 -129419882 - L1_Mus4 LINE L1 -485 6151 2996 3 869 1468 102 19 45 chrX 37230413 37230680 -129419616 - MusHAL1 LINE L1 -1202 1510 1251 3 869 7214 97 8 5 chrX 37230682 37231954 -129418342 - L1_Mus1 LINE L1 0 6567 5288 3 869 22 0 0 0 chrX 37233438 37233460 -129416836 + AT_rich Low_complexity Low_complexity 1 22 0 3 869 9087 206 130 44 chrX 37233656 37238016 -129412280 - L1_Mus1 LINE L1 -578 5305 552 3 869 241 300 49 16 chrX 37238211 37238333 -129411963 - MIR SINE MIR -11 251 126 3 869 402 290 129 14 chrX 37238572 37238719 -129411577 + B3 SINE B2 47 210 -6 3 869 775 340 137 35 chrX 37239087 37239628 -129410668 + MLT1E2 LTR MaLR 25 623 -4 3 869 3257 300 61 11 chrX 37240053 37241188 -129409108 + Lx7 LINE L1 6145 7335 -361 3 869 695 205 237 0 chrX 37241385 37241531 -129408765 + Lx9 LINE L1 7288 7477 -167 3 869 312 70 0 0 chrX 37241531 37241574 -129408722 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 869 695 205 237 0 chrX 37241574 37241710 -129408586 + Lx9 LINE L1 7478 7636 -8 3 869 21 0 0 0 chrX 37241717 37241738 -129408558 + AT_rich Low_complexity Low_complexity 1 21 0 3 869 24904 96 18 8 chrX 37241834 37246124 -129404172 - L1Md_A LINE L1 -1121 4762 410 3 869 2843 50 0 6 chrX 37246209 37246571 -129403725 + L1Md_F3 LINE L1 6224 6583 -1 3 869 28 48 0 0 chrX 37246925 37246967 -129403329 + AT_rich Low_complexity Low_complexity 1 42 0 3 869 781 90 8 8 chrX 37247131 37247265 -129403031 + (TAGA)n Simple_repeat Simple_repeat 4 137 0 3 869 366 302 93 7 chrX 37247389 37247539 -129402757 + MLT1B LTR MaLR 10 172 -218 3 869 192 40 0 0 chrX 37247883 37247908 -129402388 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 869 481 260 10 0 chrX 37247912 37248012 -129402284 - B1_Mur4 SINE Alu -36 114 14 3 869 2406 71 34 0 chrX 37248058 37248384 -129401912 + L1_Mus1 LINE L1 6225 6561 -6 3 869 1005 129 7 0 chrX 37248522 37248669 -129401627 + B1_Mus1 SINE Alu 1 148 0 3 869 1255 282 76 33 chrX 37248707 37249165 -129401131 + Lx6 LINE L1 6956 7433 -27 3 869 13206 102 5 27 chrX 37249339 37249877 -129400419 - L1_Mm LINE L1 -58 5825 5293 3 869 3262 65 0 0 chrX 37249877 37250291 -129400005 - L1Md_F2 LINE L1 -2 6580 6167 3 869 13206 102 5 27 chrX 37250291 37251754 -129398542 - L1_Mm LINE L1 -591 5292 3868 3 869 5015 104 7 0 chrX 37251754 37252493 -129397803 + L1_Mus1 LINE L1 5841 6567 0 3 869 33359 80 24 8 chrX 37252894 37258208 -129392088 + L1Md_F3 LINE L1 220 5588 -298 3 869 7706 53 3 1 chrX 37258209 37259188 -129391108 + L1Md_F3 LINE L1 5590 6570 -17 3 869 4237 89 16 6 chrX 37259345 37259989 -129390307 - MusHAL1 LINE L1 -396 2316 1667 3 869 3401 106 16 2 chrX 37259994 37260495 -129389801 - Lx3_Mus LINE L1 0 7009 6502 3 869 229 229 58 35 chrX 37260595 37260681 -129389615 + L1MDb LINE L1 1224 1311 -5098 3 869 383 362 29 0 chrX 37260695 37260833 -129389463 - B3 SINE B2 -5 211 70 3 869 8272 119 6 24 chrX 37260837 37263039 -129387257 - Lx3A LINE L1 -6 6975 4823 3 869 6302 108 22 5 chrX 37263045 37264019 -129386277 + Lx3A LINE L1 3814 4803 -1083 3 869 4294 106 3 22 chrX 37264016 37264699 -129385597 - MusHAL1 LINE L1 -1026 1686 1017 3 869 405 0 0 0 chrX 37264785 37264830 -129385466 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 869 31704 101 8 3 chrX 37264880 37270264 -129380032 + L1Md_F2 LINE L1 210 5585 -298 3 869 7177 75 16 2 chrX 37270265 37271234 -129379062 + L1Md_F2 LINE L1 5587 6568 -14 3 869 243 0 0 0 chrX 37271291 37271318 -129378978 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 3 869 251 277 68 19 chrX 37271546 37271649 -129378647 - L2 LINE L2 -939 2480 2373 3 869 616 324 70 5 chrX 37272259 37272473 -129377823 + RMER15 LTR ERVL 326 553 -22 3 869 1362 290 60 11 chrX 37273072 37273508 -129376788 + RMER15-int LTR ERVL 658 1114 -3885 3 869 527 304 54 7 chrX 37274934 37275083 -129375213 - RSINE1 SINE B4 -6 159 4 3 869 1215 207 30 8 chrX 37277159 37277393 -129372903 + RLTR42 LTR ERVK 1 239 0 3 869 957 135 25 0 chrX 37277534 37277688 -129372608 - B2_Mm1t SINE B2 -14 179 1 3 869 1101 249 12 16 chrX 37277842 37278122 -129372174 + Lx6 LINE L1 7209 7449 -11 3 869 901 221 110 82 chrX 37278374 37278501 -129371795 - Lx7 LINE L1 0 7696 7555 3 869 2575 47 0 0 chrX 37278501 37278820 -129371476 + L1Md_T LINE L1 6263 6581 -1 3 869 901 221 110 82 chrX 37278820 37279007 -129371289 - Lx7 LINE L1 -142 7554 7375 3 869 190 0 32 32 chrX 37279014 37279045 -129371251 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 869 1111 54 13 26 chrX 37279045 37279189 -129371107 - B1_Mur4 SINE Alu -6 144 1 3 869 901 221 110 82 chrX 37279189 37279337 -129370959 - Lx7 LINE L1 -322 7374 7221 3 869 454 218 144 9 chrX 37279333 37279444 -129370852 + Lx7 LINE L1 6989 7114 -582 3 869 315 96 0 0 chrX 37279873 37279925 -129370371 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 869 1098 183 26 56 chrX 37281400 37281632 -129368664 + URR1B DNA MER1_type 1 225 0 3 869 366 205 0 0 chrX 37283112 37283190 -129367106 + (TA)n Simple_repeat Simple_repeat 2 79 0 3 869 198 358 62 49 chrX 37283437 37283581 -129366715 - L2 LINE L2 -623 2796 2651 3 869 227 398 37 16 chrX 37284144 37284333 -129365963 - L2 LINE L2 -937 2482 2290 3 869 368 257 41 68 chrX 37285279 37285425 -129364871 + RMER15 LTR ERVL 342 483 -92 3 869 232 267 133 0 chrX 37286392 37286452 -129363844 - MLT1K LTR MaLR -42 553 486 3 869 38553 6 0 0 chrX 37286806 37292385 -129357911 + L1Md_A LINE L1 8 5586 -297 3 869 8970 2 3 0 chrX 37292385 37293378 -129356918 + L1Md_A LINE L1 5587 6582 0 3 869 941 260 32 21 chrX 37294241 37294524 -129355772 + MLT1A0-int LTR MaLR 1436 1721 -14 3 869 701 300 92 24 chrX 37294537 37294875 -129355421 + MLT1A0 LTR MaLR 1 361 -4 3 869 269 306 140 19 chrX 37295869 37296085 -129354211 + MIR SINE MIR 29 260 -2 3 869 357 43 0 0 chrX 37296906 37296953 -129353343 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 3 869 450 250 0 0 chrX 37297161 37297269 -129353027 - Lx9 LINE L1 -179 7465 7358 3 869 183 350 125 12 chrX 37297378 37297496 -129352800 + MIRc SINE MIR 50 189 -79 3 869 757 234 60 79 chrX 37297564 37297677 -129352619 - Lx9 LINE L1 -1 7643 7542 3 869 918 109 0 0 chrX 37297677 37297814 -129352482 + (TCTCC)n Simple_repeat Simple_repeat 4 140 0 3 869 1036 50 0 67 chrX 37297816 37298009 -129352287 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 3 869 261 0 0 0 chrX 37298009 37298038 -129352258 + (TCTCC)n Simple_repeat Simple_repeat 2 30 0 3 869 757 234 60 79 chrX 37298038 37298063 -129352233 - Lx9 LINE L1 -103 7541 7520 3 869 441 0 0 0 chrX 37298063 37298112 -129352184 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 869 1086 79 0 0 chrX 37298112 37298251 -129352045 - B1_Mus1 SINE Alu -9 139 1 3 869 757 234 60 79 chrX 37298251 37298524 -129351772 - Lx9 LINE L1 -125 7519 7239 3 869 255 318 0 16 chrX 37298658 37298722 -129351574 - ID4 SINE ID -9 74 12 3 869 279 0 0 0 chrX 37300329 37300360 -129349936 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 3 869 478 193 257 0 chrX 37300730 37300839 -129349457 + B1_Mus1 SINE Alu 5 141 -7 3 869 243 0 0 0 chrX 37300850 37300877 -129349419 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 3 869 1333 51 0 11 chrX 37300877 37301057 -129349239 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 3 869 342 0 0 0 chrX 37301775 37301813 -129348483 + (TTA)n Simple_repeat Simple_repeat 1 38 0 3 869 581 261 76 21 chrX 37302862 37303007 -129347289 + RSINE1 SINE B4 7 159 -6 3 869 23 38 0 54 chrX 37303044 37303100 -129347196 + AT_rich Low_complexity Low_complexity 1 53 0 3 869 2497 127 21 19 chrX 37303194 37303575 -129346721 - L1_Mur2 LINE L1 -872 5005 4624 3 869 240 35 0 0 chrX 37303575 37303604 -129346692 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 869 2497 127 21 19 chrX 37303604 37303640 -129346656 - L1_Mur2 LINE L1 -1254 4623 4588 3 869 3437 223 37 66 chrX 37303637 37304483 -129345813 + Lx5 LINE L1 6227 7047 -3 3 869 21 0 0 0 chrX 37304722 37304743 -129345553 + AT_rich Low_complexity Low_complexity 1 21 0 3 869 25 0 0 0 chrX 37304832 37304857 -129345439 + AT_rich Low_complexity Low_complexity 1 25 0 3 869 1539 210 73 15 chrX 37304857 37305304 -129344992 - Lx2B LINE L1 -1 6996 6510 3 869 227 245 42 11 chrX 37305295 37305390 -129344906 - Lx9 LINE L1 -20 7624 7527 3 869 237 313 128 17 chrX 37305731 37305848 -129344448 - MIRb SINE MIR -23 245 116 3 869 441 116 0 0 chrX 37306157 37306226 -129344070 + (GGAA)n Simple_repeat Simple_repeat 3 71 0 4 869 28 0 0 0 chrX 37307006 37307034 -129343262 + AT_rich Low_complexity Low_complexity 1 28 0 4 869 4418 145 70 26 chrX 37307034 37307142 -129343154 - Lx LINE L1 -25 6629 6535 4 869 180 0 0 0 chrX 37307142 37307162 -129343134 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 4 869 4418 145 70 26 chrX 37307162 37307858 -129342438 - Lx LINE L1 -120 6534 5792 4 869 3441 103 14 18 chrX 37307860 37308365 -129341931 - L1Md_F2 LINE L1 -1 6581 6079 4 869 356 89 0 0 chrX 37308365 37308410 -129341886 - L1_Mus3 LINE L1 -371 6267 6223 4 869 220 376 58 19 chrX 37309332 37309435 -129340861 - L2c LINE L2 0 3387 3281 4 869 231 61 0 0 chrX 37309761 37309794 -129340502 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 4 869 3565 33 2 0 chrX 37309875 37310299 -129339997 + L1Md_F2 LINE L1 5162 5586 -297 4 869 7687 62 3 0 chrX 37310299 37311291 -129339005 + L1Md_F2 LINE L1 5587 6581 -1 4 869 346 307 108 23 chrX 37311335 37311465 -129338831 - B1F1 SINE Alu -8 141 1 4 869 262 312 0 59 chrX 37311376 37311478 -129338818 - MT2B2 LTR ERVL -334 250 155 4 869 8698 153 52 9 chrX 37311486 37314010 -129336286 - Lx3C LINE L1 0 6976 4333 4 869 252 59 0 0 chrX 37314055 37314089 -129336207 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 4 869 192 327 80 0 chrX 37314308 37314421 -129335875 - MIR SINE MIR -13 249 128 4 869 1614 223 107 51 chrX 37314470 37315023 -129335273 + RLTR40 LTR ERVK 19 602 -215 4 869 955 311 24 33 chrX 37315030 37315363 -129334933 - Lx8 LINE L1 -144 7329 7000 4 869 191 371 0 14 chrX 37315375 37315446 -129334850 - MIRm SINE MIR -161 115 46 4 869 432 0 0 0 chrX 37317437 37317485 -129332811 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 4 869 1480 338 83 65 chrX 37317543 37318531 -129331765 + MLT1A1-int LTR MaLR 8 1013 -722 4 869 360 0 54 18 chrX 37318548 37318604 -129331692 + (TTTTTG)n Simple_repeat Simple_repeat 3 60 0 4 869 501 270 115 0 chrX 37318825 37318973 -129331323 + B3 SINE B2 52 216 0 4 869 265 361 77 16 chrX 37318976 37319159 -129331137 - MLT-int LTR MaLR -1016 719 526 4 869 311 0 0 25 chrX 37319164 37319204 -129331092 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 869 251 333 129 6 chrX 37319264 37319427 -129330869 + MLT1A1-int LTR MaLR 1338 1520 -215 4 869 3396 178 12 45 chrX 37319659 37320323 -129329973 - RLTR26 LTR ERVK 0 642 1 4 869 447 264 155 12 chrX 37320323 37320475 -129329821 + MLT1A1-int LTR MaLR 1560 1734 -1 4 869 410 339 110 87 chrX 37320476 37320867 -129329429 + MLT1A1 LTR MaLR 1 400 -8 4 869 8648 141 14 25 chrX 37322116 37324171 -129326125 + Lx2A LINE L1 4980 7006 -2 4 869 509 364 25 49 chrX 37324338 37324713 -129325583 - L1ME2 LINE L1 -244 5935 5571 4 869 8825 152 52 2 chrX 37324717 37327022 -129323274 - Lx2 LINE L1 -1 6996 4548 4 869 201 182 0 0 chrX 37327641 37327674 -129322622 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 869 22 94 0 0 chrX 37328347 37328411 -129321885 + AT_rich Low_complexity Low_complexity 1 64 0 4 869 309 25 0 0 chrX 37329216 37329256 -129321040 - L1_Mus1 LINE L1 -422 6145 6106 4 869 2204 23 0 0 chrX 37329254 37329511 -129320785 - L1_Mus1 LINE L1 -635 5932 5676 4 869 5830 146 20 2 chrX 37329511 37330447 -129319849 + Lx LINE L1 5671 6623 -31 4 869 232 254 0 40 chrX 37330453 37330527 -129319769 + L1MA5 LINE L1 6144 6214 -86 4 869 580 300 71 78 chrX 37330539 37330948 -129319348 - RMER10A LTR ERVL -25 417 12 4 869 4821 186 57 46 chrX 37331545 37332142 -129318154 - RLTR25A LTR ERVK -9 1094 517 4 869 189 0 0 0 chrX 37332142 37332163 -129318133 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 4 869 4821 186 57 46 chrX 37332163 37332633 -129317663 - RLTR25A LTR ERVK -587 516 16 4 869 386 313 0 42 chrX 37332675 37332795 -129317501 - Lx8 LINE L1 -157 7316 7202 4 869 741 312 69 7 chrX 37332805 37333108 -129317188 - Lx8 LINE L1 -904 6569 6248 4 869 28 0 0 0 chrX 37334162 37334190 -129316106 + AT_rich Low_complexity Low_complexity 1 28 0 4 869 1160 249 35 68 chrX 37334405 37334887 -129315409 + Lx7 LINE L1 7099 7564 -132 4 869 199 88 28 56 chrX 37334900 37334972 -129315324 + T-rich Low_complexity Low_complexity 3 72 0 4 869 1089 95 0 0 chrX 37334972 37335119 -129315177 - B1_Mm SINE Alu 0 147 1 4 869 673 164 23 15 chrX 37335175 37335305 -129314991 + ORR1D1-int LTR MaLR 1240 1370 0 4 869 860 253 176 6 chrX 37335305 37335623 -129314673 + ORR1D1 LTR MaLR 1 372 -2 4 869 183 80 0 0 chrX 37335739 37335764 -129314532 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 869 195 393 92 0 chrX 37335820 37336016 -129314280 - L2 LINE L2 -482 2937 2724 4 869 39 0 0 0 chrX 37336158 37336197 -129314099 + AT_rich Low_complexity Low_complexity 1 39 0 4 869 25 31 0 0 chrX 37336301 37336333 -129313963 + AT_rich Low_complexity Low_complexity 1 32 0 4 869 954 373 46 10 chrX 37336338 37336834 -129313462 - LTR40a LTR ERVL -2 517 4 4 869 4149 71 0 18 chrX 37337430 37337578 -129312718 - L1_Mm LINE L1 -442 5441 5303 4 869 1552 48 0 0 chrX 37337578 37337765 -129312531 - B2_Mm1t SINE B2 -5 188 2 4 869 4149 71 0 18 chrX 37337765 37338178 -129312118 - L1_Mm LINE L1 -581 5302 4890 4 869 4153 82 0 5 chrX 37338178 37338732 -129311564 + L1Md_F2 LINE L1 6019 6569 -13 4 869 30 0 0 0 chrX 37338785 37338815 -129311481 + AT_rich Low_complexity Low_complexity 1 30 0 4 869 2518 297 45 0 chrX 37339224 37339949 -129310347 - Lx8 LINE L1 -358 7115 6358 4 869 542 241 53 1 chrX 37340118 37340262 -129310034 - B3 SINE B2 -7 209 61 4 869 2668 144 16 5 chrX 37340429 37340863 -129309433 - Lx4A LINE L1 -3 7055 6617 4 869 293 146 44 22 chrX 37341352 37341443 -129308853 + (TTATA)n Simple_repeat Simple_repeat 3 95 0 4 869 568 250 62 26 chrX 37341625 37341851 -129308445 - Lx9 LINE L1 -1701 5943 5710 4 869 27 0 0 0 chrX 37341867 37341894 -129308402 + AT_rich Low_complexity Low_complexity 1 27 0 4 869 249 250 14 14 chrX 37341913 37341982 -129308314 - Lx9 LINE L1 -217 7427 7359 4 869 594 157 42 21 chrX 37342956 37343099 -129307197 - Lx9 LINE L1 -1 7643 7498 4 869 6000 38 0 0 chrX 37343145 37343858 -129306438 - L1Md_T LINE L1 0 6582 5870 4 869 1264 196 25 0 chrX 37343880 37344120 -129306176 - Lx9 LINE L1 -177 7467 7222 4 869 2994 317 41 16 chrX 37344330 37344402 -129305894 - Lx8 LINE L1 -189 7284 7219 4 869 3464 123 125 21 chrX 37344402 37344743 -129305553 + RMER17A LTR ERVK 1 352 -399 4 869 563 40 14 0 chrX 37344743 37344817 -129305479 + (TC)n Simple_repeat Simple_repeat 1 75 0 4 869 3464 123 125 21 chrX 37344817 37345155 -129305141 + RMER17A LTR ERVK 353 750 -1 4 869 2994 317 41 16 chrX 37345155 37346238 -129304058 - Lx8 LINE L1 -255 7218 6101 4 869 477 294 16 5 chrX 37346572 37346757 -129303539 - Lx8 LINE L1 -1796 5900 5703 4 869 483 251 185 28 chrX 37346809 37347338 -129302958 - L1_Mur3 LINE L1 -2453 3427 2816 4 869 453 324 15 7 chrX 37347497 37347634 -129302662 - B4A SINE B4 -147 145 8 4 869 198 0 0 0 chrX 37347647 37347669 -129302627 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 4 869 32 43 0 0 chrX 37347769 37347815 -129302481 + AT_rich Low_complexity Low_complexity 1 46 0 4 869 880 288 13 0 chrX 37348022 37348258 -129302038 - Lx8 LINE L1 -482 6991 6753 4 869 300 292 11 0 chrX 37348274 37348363 -129301933 + (TG)n Simple_repeat Simple_repeat 2 91 0 4 869 9267 161 19 4 chrX 37348858 37351312 -129298984 - Lx LINE L1 -1 6653 4166 4 869 1231 76 0 0 chrX 37351316 37351487 -129298809 - L1_Mus1 LINE L1 -1 6566 6396 4 869 1274 31 0 41 chrX 37351487 37351656 -129298640 + L1_Mus1 LINE L1 5996 6157 -410 4 869 8396 92 12 17 chrX 37351669 37352936 -129297360 + MusHAL1 LINE L1 926 2186 -526 4 869 3132 68 0 8 chrX 37354576 37354975 -129295321 + MTA_Mm LTR MaLR 1 396 0 4 869 935 108 10 149 chrX 37355063 37355258 -129295038 - RLTR23 LTR ERV1 -258 172 5 4 108 713 323 102 33 chrX 37355267 37355867 -129294429 - MERVK26-int LTR ERVK -4119 2800 2160 4 870 514 342 24 36 chrX 37356074 37356103 -129294193 - MERVK26-int LTR ERVK -5048 1871 1843 4 870 4212 121 41 6 chrX 37356103 37356761 -129293535 - L1_Mus4 LINE L1 0 6636 5956 4 870 514 343 25 38 chrX 37356761 37357076 -129293220 - MERVK26-int LTR ERVK -5077 1842 1471 4 870 3214 45 0 5 chrX 37357115 37357517 -129292779 - L1Md_F2 LINE L1 -1 6581 6182 4 870 3460 106 48 36 chrX 37358542 37358590 -129291706 + RMER2 LTR ERV1 1 42 -525 4 870 2852 89 12 14 chrX 37358590 37359012 -129291284 - BGLII LTR ERVK 0 421 1 4 870 3460 106 48 36 chrX 37359012 37359080 -129291216 + RMER2 LTR ERV1 43 110 -457 4 870 2941 74 15 10 chrX 37359080 37359478 -129290818 - MTB LTR MaLR 0 400 1 4 870 3460 106 48 36 chrX 37359478 37359920 -129290376 + RMER2 LTR ERV1 111 567 0 4 870 335 312 36 18 chrX 37359920 37360013 -129290283 - B4 SINE B4 -65 227 133 4 870 277 357 12 0 chrX 37360028 37360112 -129290184 - B4A SINE B4 -207 85 1 4 870 229 152 22 0 chrX 37360112 37360158 -129290138 - L1M2 LINE L1 -1970 4173 4127 4 870 242 200 0 36 chrX 37360223 37360306 -129289990 + T-rich Low_complexity Low_complexity 4 83 0 4 870 2700 239 72 7 chrX 37361906 37362500 -129287796 - Lx5 LINE L1 -28 7022 6390 4 870 6383 169 55 74 chrX 37362495 37362804 -129287492 - L1_Mur3 LINE L1 -3114 2763 2478 4 870 2470 56 6 3 chrX 37362804 37363124 -129287172 - L1_Mus1 LINE L1 0 6567 6247 4 870 6383 169 55 74 chrX 37363124 37363561 -129286735 - L1_Mur3 LINE L1 -3400 2477 2083 4 870 967 139 0 0 chrX 37363561 37363705 -129286591 - B1_Mm SINE Alu -2 145 2 4 870 6383 169 55 74 chrX 37363705 37363737 -129286559 - L1_Mur3 LINE L1 -3795 2082 2062 4 870 213 39 0 0 chrX 37363737 37363763 -129286533 + (TTG)n Simple_repeat Simple_repeat 3 28 0 4 870 6383 191 73 65 chrX 37363763 37364865 -129285431 - L1_Mur3 LINE L1 -3816 2061 881 4 870 715 315 50 3 chrX 37365214 37365586 -129284710 - L1M2 LINE L1 -2093 4047 3656 4 870 27 49 0 0 chrX 37365633 37365674 -129284622 + AT_rich Low_complexity Low_complexity 1 41 0 4 870 1344 74 42 38 chrX 37365674 37365886 -129284410 - L1_Mus1 LINE L1 -2 6565 6353 4 870 235 333 12 24 chrX 37365968 37366051 -129284245 - B1F SINE Alu 0 149 68 4 870 243 410 9 0 chrX 37366043 37366148 -129284148 - PB1D10 SINE Alu -9 108 3 4 870 551 298 12 18 chrX 37366172 37366336 -129283960 + ORR1E LTR MaLR 2 164 -195 4 870 1434 265 60 22 chrX 37366339 37366741 -129283555 + MTD LTR MaLR 1 417 -2 4 870 228 358 78 83 chrX 37367033 37367225 -129283071 - MamSINE1 SINE tRNA -8 282 92 4 870 3083 163 53 113 chrX 37368415 37369155 -129281141 - RMER6A LTR ERVK -4 752 58 4 870 618 14 0 0 chrX 37369536 37369607 -129280689 + (TA)n Simple_repeat Simple_repeat 2 72 0 4 870 656 258 58 8 chrX 37369668 37369926 -129280370 + L1MA4 LINE L1 5662 5932 -368 4 870 538 261 24 122 chrX 37370485 37370690 -129279606 - RLTR23 LTR ERV1 -25 405 221 4 870 3641 74 2 2 chrX 37370710 37371237 -129279059 + L1_Mm LINE L1 1245 1771 -4112 4 870 9022 4 0 0 chrX 37371236 37372924 -129277372 - L1Md_A LINE L1 0 6582 4895 5 870 10852 120 6 3 chrX 37372922 37374649 -129275647 + L1_Mm LINE L1 1757 3488 -2395 4 870 1584 70 60 36 chrX 37374659 37374909 -129275387 + L1_Mus1 LINE L1 6312 6567 0 5 870 33148 76 22 1 chrX 37375168 37381307 -129268989 - L1Md_F2 LINE L1 0 6582 307 5 870 1812 9 0 0 chrX 37381436 37381647 -129268649 - L1_Mm LINE L1 -484 5399 5189 5 870 248 0 0 24 chrX 37381647 37381688 -129268608 + L1Md_T LINE L1 6543 6582 0 5 870 21 57 0 0 chrX 37381816 37381851 -129268445 + AT_rich Low_complexity Low_complexity 1 35 0 5 870 22 0 0 0 chrX 37382021 37382043 -129268253 + AT_rich Low_complexity Low_complexity 1 22 0 5 870 293 359 91 10 chrX 37382682 37382879 -129267417 - MIR SINE MIR -49 213 1 5 870 231 338 82 45 chrX 37383084 37383304 -129266992 - MIR SINE MIR 0 262 35 5 870 337 281 51 22 chrX 37384255 37384393 -129265903 + L1MB7 LINE L1 5812 5953 -231 5 870 26 50 0 0 chrX 37384539 37384579 -129265717 + AT_rich Low_complexity Low_complexity 1 40 0 5 870 273 337 54 43 chrX 37384680 37384866 -129265430 - L2 LINE L2 -529 2890 2703 5 870 642 319 31 25 chrX 37384870 37385156 -129265140 - MT2A LTR ERVL -1 532 245 5 870 3494 194 54 10 chrX 37385201 37385889 -129264407 - Lx2B LINE L1 -7 6993 6276 5 870 405 213 31 124 chrX 37386475 37386636 -129263660 - Lx4B LINE L1 -4 7054 6909 5 870 410 323 152 56 chrX 37387113 37387382 -129262914 + MER67C LTR ERV1 144 438 -273 5 870 278 50 25 0 chrX 37387443 37387483 -129262813 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 870 1412 238 21 24 chrX 37387552 37387927 -129262369 - ORR1D1 LTR MaLR 0 374 1 5 870 2938 248 64 4 chrX 37387928 37388084 -129262212 - ORR1D1-int LTR MaLR 0 1370 1204 5 870 216 0 0 0 chrX 37388084 37388108 -129262188 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 870 2938 248 64 4 chrX 37388108 37388639 -129261657 - ORR1D1-int LTR MaLR -167 1203 643 5 870 1276 225 72 53 chrX 37388694 37389070 -129261226 - ORR1D1-int LTR MaLR -987 383 1 5 870 1306 241 36 14 chrX 37389072 37389270 -129261026 - ORR1D1 LTR MaLR 0 374 177 5 870 324 0 0 0 chrX 37389270 37389306 -129260990 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 870 1306 241 36 14 chrX 37389306 37389469 -129260827 - ORR1D1 LTR MaLR -198 176 6 5 870 293 380 75 40 chrX 37389954 37390302 -129259994 - L2c LINE L2 -50 3337 2978 5 870 1607 212 48 28 chrX 37390486 37390841 -129259455 + RMER19A LTR ERVK 3 364 -373 5 870 7428 78 9 7 chrX 37390841 37392539 -129257757 - L1Md_F2 LINE L1 -1 6581 4877 5 870 18172 75 5 5 chrX 37392532 37392790 -129257506 - L1Md_F2 LINE L1 -2139 3744 3487 5 870 281 47 23 0 chrX 37392790 37392833 -129257463 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 5 870 18172 103 11 15 chrX 37392833 37395920 -129254376 - L1Md_F2 LINE L1 -2397 3486 415 5 870 370 291 39 0 chrX 37395923 37396050 -129254246 + RMER19B LTR ERVK 303 434 -177 5 870 3742 119 121 95 chrX 37396060 37396923 -129253373 + RMER17D LTR ERVK 3 887 -2 5 870 465 232 10 0 chrX 37396927 37397026 -129253270 + RMER19B LTR ERVK 734 833 -69 5 870 623 197 73 0 chrX 37397050 37397187 -129253109 + RLTR40 LTR ERVK 1 147 -670 5 870 7064 198 26 12 chrX 37397203 37398733 -129251563 - Lx5 LINE L1 -1 7049 5495 5 870 249 159 0 0 chrX 37399256 37399300 -129250996 + GA-rich Low_complexity Low_complexity 1 44 0 5 870 943 137 95 0 chrX 37400362 37400530 -129249766 - Lx5 LINE L1 -1159 5891 5708 5 870 2982 146 8 6 chrX 37400517 37401035 -129249261 + L1_Mur2 LINE L1 4039 4557 -1320 5 870 258 197 14 57 chrX 37401037 37401107 -129249189 + RLTR40 LTR ERVK 131 197 -620 5 870 663 275 18 88 chrX 37401109 37401336 -129248960 + RLTR40 LTR ERVK 598 808 -9 5 870 376 369 15 8 chrX 37402671 37402805 -129247491 + B1_Mur1 SINE Alu 7 141 -8 5 870 234 274 182 12 chrX 37402913 37403083 -129247213 - L1MA6 LINE L1 -62 6238 6040 5 870 653 103 0 17 chrX 37403107 37403225 -129247071 + (TTTC)n Simple_repeat Simple_repeat 1 116 0 5 870 994 102 0 52 chrX 37403225 37403380 -129246916 - B1_Mus2 SINE Alu 0 147 1 5 870 375 121 0 0 chrX 37403432 37403490 -129246806 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 870 3755 81 0 8 chrX 37403812 37404325 -129245971 + L1Md_F2 LINE L1 6074 6582 0 5 870 996 53 0 0 chrX 37404751 37404882 -129245414 + L1_Mus2 LINE L1 6435 6565 -1 5 870 13909 87 15 10 chrX 37405036 37407064 -129243232 - L1_Mur1 LINE L1 -212 5674 3638 5 870 262 357 0 0 chrX 37407622 37407706 -129242590 - B3A SINE B2 -113 85 2 5 870 250 279 94 19 chrX 37407884 37407990 -129242306 - Charlie8 DNA MER1_type -2224 204 91 5 870 5304 142 22 7 chrX 37407994 37408869 -129241427 + Lx4A LINE L1 6171 7058 0 5 870 224 163 0 20 chrX 37408907 37408957 -129241339 + A-rich Low_complexity Low_complexity 4 52 0 5 870 21 0 0 0 chrX 37410669 37410690 -129239606 + AT_rich Low_complexity Low_complexity 1 21 0 5 870 1084 174 87 0 chrX 37410841 37411048 -129239248 - URR1A DNA MER1_type -1 225 1 5 870 184 267 184 40 chrX 37411066 37411191 -129239105 - L2c LINE L2 0 3387 3245 5 870 2974 66 15 15 chrX 37411989 37412389 -129237907 + MTB LTR MaLR 1 400 0 5 870 236 175 30 60 chrX 37412656 37412723 -129237573 + T-rich Low_complexity Low_complexity 1 65 0 5 870 1332 97 0 5 chrX 37412725 37412911 -129237385 - B2_Mm2 SINE B2 -9 186 2 5 870 505 323 75 52 chrX 37412920 37413188 -129237108 + Lx8 LINE L1 6917 7190 -283 5 870 1158 122 0 0 chrX 37413210 37413390 -129236906 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 870 324 228 26 0 chrX 37413390 37413504 -129236792 + CT-rich Low_complexity Low_complexity 2 118 0 5 870 877 246 25 12 chrX 37413504 37413747 -129236549 - Lx6 LINE L1 -27 7433 7188 5 870 426 94 0 0 chrX 37414269 37414333 -129235963 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 870 486 70 0 0 chrX 37414518 37414589 -129235707 + (CAGAGA)n Simple_repeat Simple_repeat 2 72 0 5 870 527 301 34 38 chrX 37414680 37414865 -129235431 - MER5A DNA MER1_type 0 189 1 5 870 1200 180 19 187 chrX 37415573 37416101 -129234195 + RMER17C LTR ERVK 16 439 -519 5 870 838 248 5 27 chrX 37416366 37416586 -129233710 - B3 SINE B2 0 216 2 5 870 27 49 0 0 chrX 37417052 37417093 -129233203 + AT_rich Low_complexity Low_complexity 1 41 0 5 870 233 260 10 20 chrX 37417330 37417376 -129232920 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 870 693 53 0 0 chrX 37417376 37417470 -129232826 + L1_Mus2 LINE L1 6471 6564 -2 5 870 423 136 5 11 chrX 37417470 37417575 -129232721 + (TA)n Simple_repeat Simple_repeat 1 104 0 5 870 3772 178 30 9 chrX 37417994 37418739 -129231557 - Lx4B LINE L1 -7 7051 6292 5 870 3084 154 13 6 chrX 37418739 37419267 -129231029 + L1_Mur2 LINE L1 5244 5775 -102 5 870 1471 58 5 0 chrX 37419566 37419757 -129230539 - MTA_Mm LTR MaLR 0 396 205 5 870 1055 84 7 0 chrX 37419742 37419884 -129230412 + MTB LTR MaLR 258 400 0 5 870 332 23 47 0 chrX 37419884 37419927 -129230369 + MTB-int LTR MaLR 1 45 -1053 5 870 617 195 216 0 chrX 37420684 37420869 -129229427 + URR1B DNA MER1_type 1 225 0 5 870 23 54 0 0 chrX 37421495 37421532 -129228764 + AT_rich Low_complexity Low_complexity 1 37 0 5 870 1416 284 62 29 chrX 37421657 37422273 -129228023 - L1_Mur3 LINE L1 -1842 4038 3403 5 870 1272 248 33 15 chrX 37422518 37422854 -129227442 - Lx6 LINE L1 -4 7456 7115 5 870 804 202 0 5 chrX 37422854 37423448 -129226848 + (TG)n Simple_repeat Simple_repeat 1 590 0 5 870 657 184 9 0 chrX 37423494 37423603 -129226693 - Lx6 LINE L1 -459 7001 6892 5 870 347 302 91 24 chrX 37423705 37423915 -129226381 - L1MA5 LINE L1 -18 6282 6059 5 870 34 55 0 0 chrX 37424461 37424516 -129225780 + AT_rich Low_complexity Low_complexity 1 55 0 5 870 8923 101 14 19 chrX 37424622 37426865 -129223431 - Lx3_Mus LINE L1 0 7009 4788 5 870 253 0 0 51 chrX 37427759 37427798 -129222498 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 5 870 387 89 0 0 chrX 37428054 37428110 -129222186 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 5 870 568 159 102 8 chrX 37428487 37428614 -129221682 - Lx3C LINE L1 -2 6974 6836 5 870 5568 154 10 30 chrX 37428611 37429597 -129220699 + Lx3C LINE L1 5870 6835 -141 5 870 420 289 149 52 chrX 37429599 37429968 -129220328 - L1M4c LINE L1 -5180 1204 800 5 870 230 248 205 8 chrX 37430501 37430623 -129219673 + MIR SINE MIR 88 233 -29 5 870 12384 92 14 12 chrX 37430646 37433172 -129217124 - L1_Mus2 LINE L1 -1 6565 4045 5 870 207 0 0 0 chrX 37435387 37435410 -129214886 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 870 1234 184 25 17 chrX 37435591 37435828 -129214468 + Lx9 LINE L1 6703 6941 -703 5 870 484 200 30 0 chrX 37435852 37436017 -129214279 + (TA)n Simple_repeat Simple_repeat 2 171 0 5 870 2386 217 17 59 chrX 37436068 37436665 -129213631 + Lx9 LINE L1 6837 7408 -236 5 870 1125 131 11 0 chrX 37436809 37436984 -129213312 + B2_Mm1t SINE B2 3 179 -14 5 870 357 94 11 30 chrX 37437016 37437082 -129213214 + B2_Mm2 SINE B2 47 114 -102 5 870 468 0 0 0 chrX 37437098 37437150 -129213146 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 5 870 465 315 26 33 chrX 37437167 37437318 -129212978 + B3A SINE B2 14 163 -35 5 870 392 350 102 32 chrX 37437403 37437716 -129212580 - L2 LINE L2 -576 2843 2509 5 870 286 304 11 0 chrX 37438102 37438194 -129212102 + MLT1E1A LTR MaLR 585 677 -3 5 870 553 152 76 42 chrX 37438367 37438511 -129211785 - Lx5 LINE L1 -2 7048 6900 5 870 234 150 0 0 chrX 37438800 37438840 -129211456 + (T)n Simple_repeat Simple_repeat 1 40 0 5 870 709 215 11 48 chrX 37439378 37439564 -129210732 + Lx3C LINE L1 6791 6969 -7 5 870 1108 108 0 6 chrX 37439593 37439752 -129210544 + L1_Mur2 LINE L1 5348 5505 -372 5 870 5221 64 3 3 chrX 37440069 37440742 -129209554 - L1Md_F2 LINE L1 -1 6581 5909 5 870 4805 59 2 7 chrX 37441199 37441817 -129208479 - L1Md_F2 LINE L1 -1 6581 5967 5 870 234 105 0 0 chrX 37441966 37442004 -129208292 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 870 236 357 146 45 chrX 37442506 37442726 -129207570 - LTR16A LTR ERVL -2 449 208 5 870 16687 33 6 8 chrX 37443410 37446106 -129204190 - L1Md_F2 LINE L1 0 6582 3897 5 870 1758 260 94 35 chrX 37446104 37446866 -129203430 - L1MB7 LINE L1 -61 6123 5317 5 870 1164 288 42 17 chrX 37446872 37447349 -129202947 - L1MB5 LINE L1 -13 6161 5673 6 870 658 293 128 43 chrX 37447781 37448134 -129202162 - MTD LTR MaLR -18 401 1 6 870 1779 246 24 63 chrX 37448385 37448928 -129201368 - Lx9 LINE L1 -240 7404 6883 6 870 1116 208 32 43 chrX 37448927 37448963 -129201333 + Lx9 LINE L1 6633 6662 -982 6 870 981 115 0 0 chrX 37448963 37449102 -129201194 + B1_Mus1 SINE Alu 1 139 -9 6 870 282 29 0 0 chrX 37449102 37449137 -129201159 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 870 1116 208 32 43 chrX 37449137 37449380 -129200916 + Lx9 LINE L1 6663 6909 -735 6 870 376 257 127 9 chrX 37449389 37449609 -129200687 - L1MB5 LINE L1 -795 5351 5106 6 870 471 300 61 72 chrX 37449894 37450171 -129200125 - L1MB5 LINE L1 -1287 4859 4586 6 870 2298 72 119 11 chrX 37450374 37450726 -129199570 - RLTR10 LTR ERVK 0 390 1 6 870 234 0 0 0 chrX 37450771 37450797 -129199499 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 6 870 3917 160 74 17 chrX 37450862 37451342 -129198954 - RLTR22_Mur LTR ERVK 0 1848 1331 6 870 270 73 0 0 chrX 37451342 37451383 -129198913 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 870 3917 160 74 17 chrX 37451383 37451663 -129198633 - RLTR22_Mur LTR ERVK -518 1330 1046 6 870 1157 53 0 7 chrX 37451663 37451814 -129198482 - L1_Mus1 LINE L1 0 6567 6418 6 870 2114 62 15 4 chrX 37451822 37452095 -129198201 + L1_Mus1 LINE L1 6100 6375 -192 6 870 3689 186 130 38 chrX 37452095 37453070 -129197226 - RLTR22_Mur LTR ERVK -752 1096 32 6 870 441 0 0 0 chrX 37453072 37453121 -129197175 + (TA)n Simple_repeat Simple_repeat 1 49 0 6 870 6353 214 29 12 chrX 37453134 37453149 -129197147 - Lx3C LINE L1 -1 6975 6961 6 870 1930 82 0 0 chrX 37453149 37453405 -129196891 - L1_Mus1 LINE L1 0 6567 6312 6 870 6353 199 19 9 chrX 37453405 37455189 -129195107 - Lx3C LINE L1 -16 6960 5178 6 870 437 333 0 8 chrX 37455199 37455317 -129194979 - RSINE1 SINE B4 -48 117 1 6 870 1417 298 10 36 chrX 37455343 37455757 -129194539 + MTD LTR MaLR 1 403 -16 6 870 1452 249 69 3 chrX 37455775 37456122 -129194174 - ORR1D2 LTR MaLR 0 370 1 6 870 333 47 0 0 chrX 37456169 37456212 -129194084 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 870 519 334 30 22 chrX 37456213 37456411 -129193885 - B3A SINE B2 -14 202 8 6 870 297 333 49 0 chrX 37456550 37456694 -129193602 - L1_Mm LINE L1 -360 5808 5658 6 870 1494 270 25 37 chrX 37456957 37457364 -129192932 - MTD LTR MaLR -5 414 13 6 870 308 302 42 8 chrX 37457434 37457554 -129192742 + MLT2B4 LTR ERVL 356 479 -77 6 870 387 56 0 0 chrX 37457561 37457615 -129192681 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 870 575 89 22 0 chrX 37457798 37457888 -129192408 + (TTTC)n Simple_repeat Simple_repeat 4 95 0 6 870 970 122 7 7 chrX 37457891 37458039 -129192257 - B1_Mus1 SINE Alu 0 148 1 6 870 921 261 14 35 chrX 37458062 37458415 -129191881 - Lx2B LINE L1 -2 6974 6647 6 870 443 215 142 6 chrX 37458529 37458696 -129191600 - L1_Mm LINE L1 -1103 5043 4803 6 870 1111 98 0 0 chrX 37458698 37458862 -129191434 + L1_Mus4 LINE L1 5740 5903 -733 6 870 1113 191 91 4 chrX 37458863 37459105 -129191191 + RMER6D LTR ERVK 89 351 -369 6 870 723 280 44 9 chrX 37459138 37459365 -129190931 + L1VL4 LINE L1 197 431 -5871 6 870 485 74 0 12 chrX 37459419 37459501 -129190795 - L1Md_F2 LINE L1 -1 6581 6501 6 870 366 51 0 17 chrX 37459619 37459679 -129190617 + Lx LINE L1 6591 6649 -5 6 870 3412 34 2 0 chrX 37459688 37460096 -129190200 + L1Md_A LINE L1 6172 6580 -2 6 870 2091 362 30 50 chrX 37460709 37461542 -129188754 - RodERV21-int LTR ERV1 -149 4842 4021 6 870 2388 86 0 18 chrX 37461542 37461874 -129188422 + L1_Mus1 LINE L1 6242 6567 0 6 870 2091 362 30 50 chrX 37461874 37462554 -129187742 - RodERV21-int LTR ERV1 -971 4020 3359 6 870 594 34 34 0 chrX 37462575 37462664 -129187632 + (TA)n Simple_repeat Simple_repeat 2 93 0 6 870 1854 160 36 11 chrX 37462715 37463194 -129187102 - RMER17B LTR ERVK 0 958 433 6 870 400 220 30 112 chrX 37463414 37463583 -129186713 + RNLTR23 LTR ERVK 480 634 -8 6 870 2964 101 7 25 chrX 37463593 37464038 -129186258 - RMER17B LTR ERVK -521 437 1 6 870 3599 58 19 62 chrX 37464189 37464704 -129185592 + MT2_Mm LTR ERVL 1 493 0 6 870 518 150 0 10 chrX 37464766 37464867 -129185429 + Lx3A LINE L1 6877 6976 -5 6 870 1555 27 16 0 chrX 37465161 37465347 -129184949 + B2_Mm1t SINE B2 2 190 -3 6 870 689 254 46 6 chrX 37465357 37465531 -129184765 - MTD LTR MaLR -36 383 203 6 870 3443 185 25 8 chrX 37465532 37466201 -129184095 - Lx LINE L1 -2 6652 5972 6 870 464 314 45 40 chrX 37466201 37466594 -129183702 + Lx9 LINE L1 5161 5619 -678 6 870 1632 158 7 0 chrX 37466665 37466943 -129183353 + RLTR22_Mus LTR ERVK 1 280 -1528 6 870 37943 40 3 3 chrX 37466944 37473190 -129177106 - L1Md_T LINE L1 0 6585 275 6 870 2324 76 9 9 chrX 37473190 37473521 -129176775 + RLTR22_Mus LTR ERVK 265 595 -1213 6 870 7511 50 3 1 chrX 37473607 37474535 -129175761 - L1Md_F2 LINE L1 0 6582 5653 6 870 935 120 75 35 chrX 37474601 37474800 -129175496 - Lx LINE L1 -2 6652 6446 6 870 345 326 53 62 chrX 37474907 37475116 -129175180 + RMER12 LTR ERVK 1116 1322 0 6 870 661 293 40 10 chrX 37475126 37475432 -129174864 + Lx9 LINE L1 5614 5976 -1668 6 870 793 334 92 21 chrX 37475617 37476054 -129174242 + Lx8 LINE L1 6857 7324 -149 6 870 25 31 0 0 chrX 37476261 37476293 -129174003 + AT_rich Low_complexity Low_complexity 1 32 0 6 870 189 121 0 0 chrX 37476525 37476558 -129173738 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 870 2085 304 41 20 chrX 37477144 37477895 -129172401 - Lx9 LINE L1 -325 7319 6553 6 870 510 17 0 0 chrX 37477925 37477984 -129172312 + (GA)n Simple_repeat Simple_repeat 2 60 0 6 870 235 263 0 0 chrX 37477988 37478045 -129172251 - L1M4b LINE L1 -5105 2229 2173 6 870 269 274 16 0 chrX 37478062 37478124 -129172172 + ID SINE ID 6 68 -156 6 870 226 136 88 29 chrX 37478148 37478216 -129172080 - L1M4c LINE L1 -4861 1523 1452 6 870 293 267 13 0 chrX 37478286 37478361 -129171935 + (TG)n Simple_repeat Simple_repeat 2 77 0 6 870 646 284 84 11 chrX 37478650 37479186 -129171110 + L1M2 LINE L1 5191 5791 -398 6 870 1250 27 0 0 chrX 37479276 37479423 -129170873 - B1_Mm SINE Alu 0 147 1 6 870 660 36 0 0 chrX 37479445 37479528 -129170768 + (TA)n Simple_repeat Simple_repeat 1 83 0 6 870 478 291 8 0 chrX 37479662 37479779 -129170517 + B3 SINE B2 95 212 -4 6 870 1637 345 56 20 chrX 37479846 37480885 -129169411 - Lx8 LINE L1 -61 7412 6337 6 870 249 312 0 0 chrX 37481032 37481096 -129169200 + (TG)n Simple_repeat Simple_repeat 2 65 0 6 870 180 219 0 0 chrX 37481610 37481651 -129168645 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 870 326 263 57 28 chrX 37481651 37481792 -129168504 - Lx7 LINE L1 -1508 6188 6044 6 870 7232 151 45 109 chrX 37481803 37482014 -129168282 - RLTR21 LTR ERVK -11 1561 1347 6 870 351 0 0 0 chrX 37482014 37482053 -129168243 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 870 369 0 0 0 chrX 37482053 37482093 -129168203 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 870 7232 151 45 109 chrX 37482093 37482223 -129168073 - RLTR21 LTR ERVK -226 1346 1195 6 870 516 32 0 0 chrX 37482223 37482285 -129168011 + (TA)n Simple_repeat Simple_repeat 2 63 0 6 870 7232 151 45 109 chrX 37482285 37482915 -129167381 - RLTR21 LTR ERVK -378 1194 633 6 870 1129 124 26 35 chrX 37482915 37483141 -129167155 - Lx LINE L1 -4 6650 6427 6 870 7232 151 45 109 chrX 37483141 37483830 -129166466 - RLTR21 LTR ERVK -940 632 6 6 870 1780 264 29 11 chrX 37483877 37484476 -129165820 - Lx8 LINE L1 -1512 5961 5355 6 870 1438 277 97 21 chrX 37484726 37485202 -129165094 - Lx6 LINE L1 -11 7449 6938 6 870 1860 284 36 32 chrX 37485226 37485811 -129164485 - Lx6 LINE L1 -597 6863 6277 6 108 2473 113 50 21 chrX 37486222 37486645 -129163651 - L1_Mus4 LINE L1 0 6636 6202 6 871 195 100 0 0 chrX 37486880 37486910 -129163386 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 6 871 22 35 0 0 chrX 37488749 37488778 -129161518 + AT_rich Low_complexity Low_complexity 1 29 0 6 871 350 204 11 11 chrX 37489503 37489592 -129160704 + Lx7 LINE L1 7400 7488 -208 6 871 511 250 0 23 chrX 37489609 37489740 -129160556 - Lx6 LINE L1 -381 7079 6952 6 871 380 308 76 38 chrX 37489797 37490033 -129160263 - RLTR15 LTR ERVK -70 289 45 6 871 681 13 0 0 chrX 37490076 37490154 -129160142 + (TTTC)n Simple_repeat Simple_repeat 1 78 0 6 871 613 130 0 0 chrX 37490768 37490860 -129159436 + 4.5SRNA scRNA scRNA 1 92 -2 6 871 702 164 71 71 chrX 37490889 37491059 -129159237 - Lx LINE L1 -725 6971 6802 6 871 681 159 59 61 chrX 37491057 37491243 -129159053 - L1_Mur3 LINE L1 -10 5870 5697 6 871 242 184 0 0 chrX 37491259 37491308 -129158988 + Lx6 LINE L1 7408 7456 -4 6 871 1641 133 72 38 chrX 37491536 37491855 -129158441 - Lx LINE L1 -2 6652 6323 6 871 279 157 0 0 chrX 37492985 37493036 -129157260 + GA-rich Low_complexity Low_complexity 2 52 0 6 871 21 0 0 0 chrX 37493155 37493176 -129157120 + AT_rich Low_complexity Low_complexity 1 21 0 6 871 7482 87 17 11 chrX 37493614 37494755 -129155541 + L1_Mus3 LINE L1 5492 6638 0 6 871 245 51 0 25 chrX 37494956 37494996 -129155300 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 871 329 304 32 22 chrX 37495450 37495635 -129154661 - L1M5 LINE L1 -354 5819 5633 6 871 233 304 33 118 chrX 37495761 37495914 -129154382 + L2c LINE L2 3248 3387 0 6 871 30 0 0 0 chrX 37496047 37496077 -129154219 + AT_rich Low_complexity Low_complexity 1 30 0 6 871 797 301 38 12 chrX 37497467 37497806 -129152490 + L1MC LINE L1 5311 5658 -686 6 871 1085 147 5 0 chrX 37497875 37498065 -129152231 - Lx2 LINE L1 -6 6991 6801 6 871 5141 115 73 20 chrX 37498065 37498497 -129151799 + RMER17A2 LTR ERVK 1 447 -459 6 871 723 98 0 0 chrX 37498497 37498620 -129151676 + (TC)n Simple_repeat Simple_repeat 2 124 0 6 871 5141 115 73 20 chrX 37498620 37499047 -129151249 + RMER17A2 LTR ERVK 448 905 -1 6 871 1101 78 71 18 chrX 37499052 37499221 -129151075 - RMER17A2 LTR ERVK -728 178 1 6 871 4709 152 1 13 chrX 37499221 37500000 -129150296 - Lx2 LINE L1 -191 6806 6037 6 871 953 103 0 55 chrX 37500000 37500164 -129150132 - Lx2 LINE L1 -963 6034 5880 1 871 327 284 92 64 chrX 37500149 37500367 -129149929 + L1MC2 LINE L1 5975 6198 -146 2 871 397 234 10 21 chrX 37501777 37501873 -129148423 + MTD LTR MaLR 3 97 -322 3 871 3691 121 51 18 chrX 37501875 37502479 -129147817 - Lx2 LINE L1 -16 6981 6358 4 871 588 299 34 17 chrX 37502483 37502660 -129147636 + MTD LTR MaLR 230 409 -10 3 871 348 285 71 24 chrX 37503152 37503364 -129146932 - L1MD2 LINE L1 -418 5941 5720 5 871 501 209 152 35 chrX 37503467 37503653 -129146643 - Lx4B LINE L1 -8 7050 6753 6 871 261 0 0 0 chrX 37503663 37503692 -129146604 + (TC)n Simple_repeat Simple_repeat 2 30 0 7 871 540 45 0 0 chrX 37503692 37503758 -129146538 + (TA)n Simple_repeat Simple_repeat 2 68 0 8 871 3056 44 18 18 chrX 37503758 37504151 -129146145 - L1Md_F3 LINE L1 -23 6561 6169 9 871 630 254 29 0 chrX 37504153 37504291 -129146005 + B1_Mur4 SINE Alu 5 146 -4 1 871 186 43 0 0 chrX 37504291 37504314 -129145982 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 1 871 21 36 0 0 chrX 37504314 37504342 -129145954 + AT_rich Low_complexity Low_complexity 1 28 0 1 871 647 290 121 22 chrX 37504342 37504589 -129145707 - Lx8 LINE L1 -235 7238 6957 1 871 198 0 0 0 chrX 37504589 37504611 -129145685 + (TGGGGG)n Simple_repeat Simple_repeat 1 22 0 1 871 647 290 121 22 chrX 37504611 37504726 -129145570 - Lx8 LINE L1 -517 6956 6840 1 871 2542 286 11 30 chrX 37504963 37505704 -129144592 - Lx7 LINE L1 -525 6948 6169 1 871 270 0 0 0 chrX 37505704 37505734 -129144562 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 871 486 0 0 0 chrX 37505734 37505787 -129144509 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 871 1333 337 89 38 chrX 37505787 37505900 -129144396 - Lx7 LINE L1 -1305 6168 6053 1 871 2736 98 10 8 chrX 37505917 37506316 -129143980 - L1_Mus4 LINE L1 -5 6631 6232 1 871 24 0 0 0 chrX 37506519 37506543 -129143753 + AT_rich Low_complexity Low_complexity 1 24 0 1 871 227 115 74 37 chrX 37507368 37507422 -129142874 + L1_Mur3 LINE L1 1712 1767 -4113 2 871 609 272 42 53 chrX 37507430 37507840 -129142456 - L1_Mur3 LINE L1 -4432 1448 1024 2 871 1465 196 96 61 chrX 37507840 37508031 -129142265 - RMER17C LTR ERVK 0 410 221 2 871 570 54 0 0 chrX 37508031 37508105 -129142191 + (GA)n Simple_repeat Simple_repeat 2 75 0 2 871 1465 196 96 61 chrX 37508105 37508309 -129141987 - RMER17C LTR ERVK -190 220 1 2 871 609 280 70 50 chrX 37508309 37508498 -129141798 - L1_Mur3 LINE L1 -6705 1023 834 2 871 182 316 25 38 chrX 37508527 37508606 -129141690 - L2 LINE L2 -733 2686 2609 2 871 240 323 0 0 chrX 37509443 37509508 -129140788 - ID4_ SINE ID -1 82 18 2 871 453 36 0 0 chrX 37510438 37510493 -129139803 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 871 348 284 69 64 chrX 37510851 37511069 -129139227 + L1MB2 LINE L1 5953 6171 0 2 871 206 225 42 14 chrX 37511106 37511178 -129139118 + MIRc SINE MIR 174 247 -21 2 871 180 111 0 0 chrX 37511182 37511209 -129139087 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 2 871 221 189 9 95 chrX 37512541 37512583 -129137713 + A-rich Low_complexity Low_complexity 1 42 0 3 871 567 64 333 68 chrX 37512583 37512700 -129137596 + B1_Mus1 SINE Alu 1 148 0 3 871 221 189 9 95 chrX 37512700 37512762 -129137534 + A-rich Low_complexity Low_complexity 43 96 0 3 871 553 274 39 13 chrX 37513447 37513602 -129136694 - MER5A1 DNA MER1_type -1 165 7 3 871 498 335 23 87 chrX 37514083 37514302 -129135994 + ORR1E LTR MaLR 101 305 -54 3 871 410 277 64 71 chrX 37514913 37515053 -129135243 + B4 SINE B4 91 229 -63 3 871 1859 231 20 10 chrX 37515015 37515413 -129134883 + RMER6D LTR ERVK 315 716 -4 3 871 774 292 117 12 chrX 37515589 37516206 -129134090 - Lx8 LINE L1 -1409 6287 5637 3 871 786 318 5 0 chrX 37516264 37516475 -129133821 + B3 SINE B2 4 215 -1 3 871 1233 286 51 55 chrX 37516482 37517115 -129133181 + L1_Mur3 LINE L1 4666 5295 -585 3 871 623 89 0 0 chrX 37517122 37517212 -129133084 - B1_Mus2 SINE Alu -56 91 2 4 871 1116 296 83 32 chrX 37517219 37517746 -129132550 + Lx9 LINE L1 6900 7453 -191 4 871 492 18 0 0 chrX 37517746 37517803 -129132493 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 871 731 310 23 29 chrX 37517924 37518111 -129132185 + L1_Mur3 LINE L1 5281 5466 -414 3 871 1805 160 65 23 chrX 37518111 37518463 -129131833 - Lx3C LINE L1 -8 6968 6602 4 871 731 310 23 29 chrX 37518463 37518581 -129131715 + L1_Mur3 LINE L1 5467 5584 -296 3 871 2337 242 39 11 chrX 37518623 37519257 -129131039 + Lx9 LINE L1 6987 7638 -6 4 871 563 326 0 78 chrX 37519629 37519822 -129130474 + B3 SINE B2 2 179 -37 4 871 588 29 0 0 chrX 37519823 37519893 -129130403 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 871 319 342 28 46 chrX 37520102 37520384 -129129912 + L1M3e LINE L1 1785 2061 -4969 4 871 212 344 0 0 chrX 37520685 37520749 -129129547 + ID4_ SINE ID 6 69 -14 4 871 325 349 62 37 chrX 37520784 37521028 -129129268 + L1M3e LINE L1 3070 3319 -3784 4 871 530 237 0 0 chrX 37521072 37521169 -129129127 - B1_Mur1 SINE Alu -2 147 51 4 871 263 194 0 88 chrX 37521203 37521271 -129129025 - B1_Mur4 SINE Alu -78 72 11 5 871 434 345 55 28 chrX 37521424 37521917 -129128379 + L1M3e LINE L1 3541 4046 -3054 4 871 1139 159 5 5 chrX 37521919 37522128 -129128168 + Lx2 LINE L1 6788 6996 -1 5 871 233 197 0 15 chrX 37522281 37522348 -129127948 + GA-rich Low_complexity Low_complexity 4 69 0 5 871 2605 85 8 3 chrX 37522502 37522869 -129127427 + L1_Mus3 LINE L1 6270 6638 0 5 871 335 90 30 0 chrX 37523025 37523092 -129127204 + L1Md_F2 LINE L1 6510 6578 -4 5 871 23 54 0 0 chrX 37523668 37523705 -129126591 + AT_rich Low_complexity Low_complexity 1 37 0 5 871 242 309 0 0 chrX 37523753 37523808 -129126488 + B2_Mm1t SINE B2 1 55 -138 5 871 193 279 0 0 chrX 37524378 37524421 -129125875 + MIRm SINE MIR 231 273 -3 5 871 861 62 0 0 chrX 37525277 37525389 -129124907 + (CA)n Simple_repeat Simple_repeat 2 113 0 5 871 2926 124 26 34 chrX 37526571 37527079 -129123217 - Lx LINE L1 0 6654 6151 5 871 2830 147 33 82 chrX 37527148 37527693 -129122603 - RLTR25A LTR ERVK 0 1103 526 6 871 321 145 14 42 chrX 37527693 37527756 -129122540 - MT2B2 LTR ERVL -314 270 207 6 871 1242 82 6 0 chrX 37527756 37527961 -129122335 - L1_Mus1 LINE L1 0 6567 6392 6 871 3829 75 0 0 chrX 37527968 37528605 -129121691 + L1_Mus1 LINE L1 5432 6068 -499 6 871 1201 165 8 63 chrX 37528606 37528858 -129121438 - RLTR25A LTR ERVK -566 462 225 6 871 22871 74 2 1 chrX 37528858 37532280 -129118016 - L1Md_F2 LINE L1 -327 6255 2829 6 871 3592 183 14 7 chrX 37532288 37533047 -129117249 - L1Md_F2 LINE L1 -5534 1190 446 6 871 2792 165 35 48 chrX 37533403 37533854 -129116442 + RLTR20C LTR ERVK 1 432 -102 6 871 396 0 0 0 chrX 37533854 37533898 -129116398 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 871 2792 165 35 48 chrX 37533898 37533987 -129116309 + RLTR20C LTR ERVK 433 533 -1 6 871 1289 236 91 35 chrX 37534704 37534810 -129115486 - RLTR20B3 LTR ERVK -42 535 420 6 871 378 0 0 0 chrX 37534810 37534852 -129115444 + (CCTAA)n Simple_repeat Simple_repeat 2 43 0 6 871 1289 236 91 35 chrX 37534852 37535118 -129115178 - RLTR20B3 LTR ERVK -158 419 143 6 871 1576 161 0 0 chrX 37535202 37535462 -129114834 - RMER6D LTR ERVK -460 260 1 6 871 36823 10 12 19 chrX 37535506 37540200 -129110096 + L1Md_A LINE L1 216 4928 -955 7 871 225 183 46 77 chrX 37540200 37540265 -129110031 - RMER20A LTR ERVK -268 248 186 7 871 36823 10 12 19 chrX 37540265 37540919 -129109377 + L1Md_A LINE L1 4929 5586 -297 7 871 8790 13 1 0 chrX 37540919 37541914 -129108382 + L1Md_A LINE L1 5587 6582 0 7 871 253 350 12 0 chrX 37542069 37542149 -129108147 + ID4 SINE ID 2 82 -1 7 871 406 286 0 0 chrX 37542319 37542438 -129107858 - Lx8 LINE L1 -2 7471 7353 7 871 284 339 88 8 chrX 37542449 37542574 -129107722 - MIRb SINE MIR -109 159 25 7 871 9227 93 14 24 chrX 37542574 37544677 -129105619 - L1Md_F2 LINE L1 -12 6570 4435 7 871 413 63 0 0 chrX 37544677 37544740 -129105556 + L1Md_F2 LINE L1 6517 6579 -3 7 871 7671 237 57 96 chrX 37544740 37545978 -129104318 - L1Md_F2 LINE L1 -1443 4434 3365 7 871 293 47 0 23 chrX 37545978 37546022 -129104274 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 7 871 562 181 0 52 chrX 37546022 37546156 -129104140 - Lx4A LINE L1 -19 7039 6913 7 871 7671 237 57 96 chrX 37546156 37547250 -129103046 - L1Md_F2 LINE L1 -2513 3364 2273 7 871 1414 321 31 18 chrX 37547672 37548161 -129102135 - Lx8 LINE L1 -212 7261 6767 7 871 22 0 0 0 chrX 37548221 37548243 -129102053 + AT_rich Low_complexity Low_complexity 1 22 0 8 871 336 319 113 20 chrX 37548949 37549144 -129101152 + RMER15 LTR ERVL 347 559 -16 8 871 294 125 0 0 chrX 37549855 37549903 -129100393 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 8 871 3826 201 80 8 chrX 37549917 37550704 -129099592 - Lx5 LINE L1 -3 7047 6204 8 871 2025 193 15 10 chrX 37550702 37551110 -129099186 - Lx5 LINE L1 -965 6085 5676 8 871 964 222 0 23 chrX 37551157 37551378 -129098918 + B3 SINE B2 1 216 0 8 871 32 0 0 0 chrX 37551500 37551532 -129098764 + AT_rich Low_complexity Low_complexity 1 32 0 8 871 24 77 0 0 chrX 37552048 37552100 -129098196 + AT_rich Low_complexity Low_complexity 1 52 0 8 871 402 311 53 8 chrX 37552135 37552268 -129098028 - ID_B1 SINE B4 -5 219 81 8 871 212 59 29 0 chrX 37552693 37552727 -129097569 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8 871 414 0 0 0 chrX 37553306 37553352 -129096944 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 8 871 812 352 11 21 chrX 37554078 37554357 -129095939 + MTEa LTR MaLR 1 276 -103 9 871 243 0 0 0 chrX 37555274 37555301 -129094995 + (CA)n Simple_repeat Simple_repeat 2 28 0 9 871 858 52 0 0 chrX 37555301 37555416 -129094880 + (GA)n Simple_repeat Simple_repeat 2 117 0 9 871 21 36 0 0 chrX 37556750 37556778 -129093518 + AT_rich Low_complexity Low_complexity 1 28 0 9 871 411 21 0 0 chrX 37556886 37556934 -129093362 + (TA)n Simple_repeat Simple_repeat 2 49 0 9 871 315 252 94 8 chrX 37556961 37557089 -129093207 - MER112 DNA MER1_type -122 139 1 9 871 276 100 0 0 chrX 37558235 37558275 -129092021 + (A)n Simple_repeat Simple_repeat 1 40 0 9 871 226 349 112 20 chrX 37558860 37559012 -129091284 + MER58A DNA MER1_type 31 196 -28 9 871 2116 124 50 7 chrX 37559752 37560108 -129090188 - L1_Mus3 LINE L1 -125 6883 6290 9 871 466 76 2 0 chrX 37560069 37560136 -129090160 + L1_Mus3 LINE L1 6218 6291 -293 9 871 387 60 0 0 chrX 37560431 37560481 -129089815 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 871 1005 280 71 49 chrX 37560517 37560923 -129089373 + MTD LTR MaLR 3 417 -2 1 871 1026 166 107 10 chrX 37561011 37561178 -129089118 - ORR1B1 LTR MaLR 0 394 200 1 871 976 198 60 42 chrX 37561178 37561540 -129088756 - RLTR25B LTR ERVK -2 1026 549 1 871 448 377 0 20 chrX 37561538 37561687 -129088609 - ORR1B1 LTR MaLR -223 147 2 1 871 342 358 63 76 chrX 37561687 37561801 -129088495 - MER44B DNA MER2_type -303 247 135 1 871 3315 124 15 81 chrX 37561801 37562408 -129087888 - RMER2 LTR ERV1 0 567 1 1 871 342 319 40 60 chrX 37562408 37562540 -129087756 - MER44B DNA MER2_type -416 134 3 1 871 249 347 32 116 chrX 37563398 37563587 -129086709 + LTR80B LTR ERVL 136 308 -276 1 871 320 286 130 33 chrX 37563866 37564050 -129086246 + Lx8 LINE L1 7269 7470 -3 1 871 180 111 0 0 chrX 37564127 37564154 -129086142 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 871 378 0 0 0 chrX 37564154 37564195 -129086101 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 871 211 283 21 21 chrX 37564293 37564387 -129085909 + CT-rich Low_complexity Low_complexity 4 97 0 1 871 180 0 0 0 chrX 37564390 37564410 -129085886 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 871 217 356 9 37 chrX 37564414 37564522 -129085774 - ID_B1 SINE B4 -21 203 99 1 871 337 331 50 73 chrX 37564781 37565042 -129085254 - L1M5 LINE L1 -848 5298 5044 1 871 585 318 123 26 chrX 37565209 37565669 -129084627 - L1M5 LINE L1 -1330 4816 4315 1 871 2444 108 108 0 chrX 37565669 37566050 -129084246 - BGLII_Mus LTR ERVK 0 422 1 1 871 585 318 123 26 chrX 37566050 37566119 -129084177 - L1M5 LINE L1 -1832 4314 4236 1 871 360 0 0 0 chrX 37566326 37566366 -129083930 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 871 311 0 26 0 chrX 37566368 37566407 -129083889 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 871 215 328 0 15 chrX 37566437 37566505 -129083791 - RSINE1 SINE B4 -17 148 82 1 871 28 29 0 0 chrX 37566531 37566566 -129083730 + AT_rich Low_complexity Low_complexity 1 35 0 1 871 797 191 19 223 chrX 37566668 37566836 -129083460 - RMER1C Other Other -3 1339 1204 1 871 698 191 27 41 chrX 37566836 37566983 -129083313 + B1_Mur3 SINE Alu 5 149 0 1 871 797 191 19 223 chrX 37566983 37567191 -129083105 - RMER1C Other Other -139 1203 1040 1 871 2349 124 191 2 chrX 37567188 37567623 -129082673 - Lx4A LINE L1 0 7058 6542 1 871 286 75 57 0 chrX 37567653 37567706 -129082590 + (TTTTC)n Simple_repeat Simple_repeat 4 59 0 1 871 1841 275 32 24 chrX 37567706 37568298 -129081998 - RMER1C Other Other -341 1001 228 1 871 213 194 0 0 chrX 37568314 37568350 -129081946 - RSINE1 SINE B4 -87 78 43 1 871 388 380 56 13 chrX 37568430 37568803 -129081493 - L1M5 LINE L1 -2402 3744 3356 1 871 2830 95 10 5 chrX 37569159 37569572 -129080724 - L1Md_F2 LINE L1 -5 6577 6163 1 871 6243 103 30 13 chrX 37569572 37571282 -129079014 - L1Md_F LINE L1 -3758 2125 386 1 871 938 211 31 39 chrX 37571288 37571545 -129078751 - Lx7 LINE L1 -37 7659 7405 1 871 713 289 93 15 chrX 37571655 37571859 -129078437 - RMER21B LTR ERV1 -275 567 348 1 871 227 330 0 21 chrX 37571896 37571989 -129078307 - RMER21B LTR ERV1 -665 177 87 1 871 805 268 121 23 chrX 37572027 37572291 -129078005 - RMER10A LTR ERVL -145 297 8 1 871 3313 156 16 22 chrX 37572314 37572587 -129077709 - L1_Mur2 LINE L1 -999 4878 4603 1 871 1548 160 119 54 chrX 37572587 37572957 -129077339 + ORR1B1 LTR MaLR 1 394 0 1 871 3313 156 16 22 chrX 37572957 37573325 -129076971 - L1_Mur2 LINE L1 -1275 4602 4241 1 871 7310 187 38 16 chrX 37573321 37574856 -129075440 + Lx5 LINE L1 4877 6437 -613 1 871 189 0 0 0 chrX 37574856 37574877 -129075419 + (GA)n Simple_repeat Simple_repeat 1 21 0 1 871 7310 191 57 11 chrX 37574877 37575432 -129074864 + Lx5 LINE L1 6438 7043 -7 1 871 2828 232 104 11 chrX 37575500 37576435 -129073861 - Lx7 LINE L1 -644 7052 6034 1 871 2507 48 82 0 chrX 37576435 37576751 -129073545 - ORR1A1 LTR MaLR -4 342 1 1 871 3175 201 22 145 chrX 37576751 37577553 -129072743 - Lx7 LINE L1 -1663 6033 5227 1 871 923 96 0 15 chrX 37577553 37577690 -129072606 + B1_Mm SINE Alu 12 146 -1 1 871 3175 201 22 145 chrX 37577690 37577922 -129072374 - Lx7 LINE L1 -1663 5226 4992 1 871 413 326 91 32 chrX 37579212 37579643 -129070653 - L1MB4 LINE L1 -63 6117 5662 1 871 198 118 0 0 chrX 37579648 37579682 -129070614 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 871 372 43 0 0 chrX 37579684 37579730 -129070566 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 871 248 0 31 0 chrX 37579730 37579761 -129070535 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 871 1221 368 65 54 chrX 37580416 37581482 -129068814 - Lx8 LINE L1 -200 7273 6197 1 871 621 142 0 0 chrX 37581494 37581621 -129068675 + (TC)n Simple_repeat Simple_repeat 2 128 0 1 871 21 0 0 0 chrX 37581820 37581841 -129068455 + AT_rich Low_complexity Low_complexity 1 21 0 1 871 358 204 11 11 chrX 37581851 37581945 -129068351 + (CATATA)n Simple_repeat Simple_repeat 1 94 0 1 871 386 312 18 37 chrX 37582153 37582316 -129067980 + RSINE1 SINE B4 4 163 -2 1 871 236 257 55 0 chrX 37582336 37582445 -129067851 + L1M1 LINE L1 5814 5928 -375 1 871 500 293 43 0 chrX 37582661 37582801 -129067495 + B1F1 SINE Alu 2 147 -2 1 871 270 81 0 0 chrX 37583030 37583067 -129067229 - U2 snRNA snRNA -151 37 1 1 871 401 350 43 0 chrX 37583069 37583232 -129067064 + RCHARR1 DNA MER1_type 70 239 -735 1 871 362 270 65 21 chrX 37583268 37583420 -129066876 + MTE2a LTR MaLR 18 177 -242 1 871 333 339 17 0 chrX 37583426 37583544 -129066752 + L1M3b LINE L1 295 414 -5867 1 871 339 420 42 47 chrX 37583607 37583822 -129066474 - MLT-int LTR MaLR -416 1319 1106 1 871 648 231 110 11 chrX 37584492 37584755 -129065541 + ORR1C2 LTR MaLR 1 329 -55 1 871 2146 250 80 47 chrX 37584758 37585420 -129064876 + ORR1C2-int LTR MaLR 145 828 -542 1 871 249 310 50 136 chrX 37585440 37585720 -129064576 + RMER10B LTR ERVL 15 270 -128 1 871 2025 223 27 101 chrX 37585843 37586436 -129063860 + ORR1C2-int LTR MaLR 822 1370 0 1 871 798 202 69 226 chrX 37586481 37586855 -129063441 + ORR1C2 LTR MaLR 58 377 -2 1 871 8355 153 31 68 chrX 37586997 37587901 -129062395 + RLTR21 LTR ERVK 1 904 -668 1 871 3508 20 0 0 chrX 37587901 37588297 -129061999 - MTA_Mm LTR MaLR 0 396 1 1 871 8355 153 31 68 chrX 37588297 37589026 -129061270 + RLTR21 LTR ERVK 905 1572 0 1 871 292 302 92 2 chrX 37589260 37589429 -129060867 + L1M3b LINE L1 4002 4189 -2161 1 871 189 0 0 0 chrX 37590569 37590590 -129059706 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 871 665 112 0 18 chrX 37590594 37590703 -129059593 - B2_Mm2 SINE B2 -88 107 1 1 871 388 284 48 41 chrX 37591082 37591229 -129059067 + B1F SINE Alu 1 148 -1 1 871 1050 198 71 12 chrX 37591241 37591481 -129058815 + Lx3B LINE L1 6720 6973 0 1 871 26 64 0 0 chrX 37591491 37591538 -129058758 + AT_rich Low_complexity Low_complexity 1 47 0 1 871 1336 128 72 4 chrX 37591643 37591878 -129058418 - Lx LINE L1 -1 6653 6403 1 871 231 279 38 0 chrX 37591897 37591976 -129058320 + L1MC1 LINE L1 6006 6087 -246 1 871 211 69 0 0 chrX 37592683 37592712 -129057584 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 871 315 214 0 0 chrX 37592743 37592813 -129057483 + (CATATA)n Simple_repeat Simple_repeat 5 74 0 1 871 279 276 134 0 chrX 37593414 37593541 -129056755 - L1MA6 LINE L1 -295 6005 5862 1 871 604 278 86 46 chrX 37593559 37593932 -129056364 - L1MA6 LINE L1 -1267 4876 4489 1 871 497 16 0 16 chrX 37593938 37594001 -129056295 + (CAAAA)n Simple_repeat Simple_repeat 5 66 0 1 871 549 301 58 46 chrX 37594321 37594732 -129055564 - L1MA6 LINE L1 -1638 4505 4090 1 871 41116 5 0 0 chrX 37595060 37601426 -129048870 - L1Md_A LINE L1 0 6582 214 1 871 258 267 0 0 chrX 37601898 37601958 -129048338 - L1MC LINE L1 -2303 3843 3784 1 871 316 373 20 20 chrX 37601958 37602111 -129048185 - MT2A LTR ERVL -69 464 312 1 871 31 26 0 0 chrX 37602213 37602251 -129048045 + AT_rich Low_complexity Low_complexity 1 38 0 1 871 255 158 0 11 chrX 37603008 37603069 -129047227 + L1M2 LINE L1 5677 5735 -565 1 871 3335 165 97 15 chrX 37603121 37603774 -129046522 - RMER6D LTR ERVK -4 716 11 1 871 1064 100 0 7 chrX 37603785 37603926 -129046370 + B1_Mm SINE Alu 2 141 -6 1 871 401 0 0 20 chrX 37603928 37603978 -129046318 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 1 871 1009 118 77 5 chrX 37604868 37605063 -129045233 - Lx9 LINE L1 0 7644 7436 1 871 4706 39 0 0 chrX 37605115 37605677 -129044619 - L1Md_T LINE L1 0 6582 6021 1 871 23 54 0 0 chrX 37605721 37605758 -129044538 + AT_rich Low_complexity Low_complexity 1 37 0 1 871 440 196 44 53 chrX 37606287 37606400 -129043896 - MER92A LTR ERV1 -4 408 297 1 871 188 364 50 20 chrX 37606671 37606772 -129043524 + L3 LINE CR1 4351 4454 -35 1 871 21 0 0 0 chrX 37607530 37607551 -129042745 + AT_rich Low_complexity Low_complexity 1 21 0 1 871 275 293 83 98 chrX 37608352 37608617 -129041679 - L1MD LINE L1 -531 5828 5568 1 871 1468 317 122 11 chrX 37609369 37610096 -129040200 + Zaphod DNA Tip100 6 813 -3218 1 871 287 375 6 18 chrX 37610185 37610348 -129039948 - RSINE1 SINE B4 -2 163 3 1 871 27 29 0 0 chrX 37610358 37610392 -129039904 + AT_rich Low_complexity Low_complexity 1 34 0 1 871 477 333 97 7 chrX 37610541 37610927 -129039369 - Lx9 LINE L1 -178 7466 6920 1 871 6764 11 0 0 chrX 37611013 37611777 -129038519 + L1Md_A LINE L1 4823 5586 -297 1 871 8741 17 0 0 chrX 37611777 37612772 -129037524 + L1Md_A LINE L1 5587 6581 -1 1 871 987 141 0 6 chrX 37613045 37613202 -129037094 + B2_Mm2 SINE B2 6 161 -34 1 871 467 308 81 40 chrX 37613547 37614018 -129036278 - L1MB4 LINE L1 -2 6178 5689 1 871 607 264 104 33 chrX 37614043 37614313 -129035983 - L1MB4 LINE L1 -576 5604 5316 1 871 246 219 0 0 chrX 37614332 37614396 -129035900 + (TAG)n Simple_repeat Simple_repeat 1 64 0 1 871 317 321 28 9 chrX 37614428 37614535 -129035761 - RSINE1 SINE B4 0 165 57 1 871 209 93 36 36 chrX 37614788 37614844 -129035452 + (TA)n Simple_repeat Simple_repeat 1 56 0 1 871 25 0 0 0 chrX 37614896 37614921 -129035375 + AT_rich Low_complexity Low_complexity 1 25 0 1 871 21 0 0 0 chrX 37614930 37614951 -129035345 + AT_rich Low_complexity Low_complexity 1 21 0 1 871 537 227 65 56 chrX 37615104 37615319 -129034977 - L1_Rod LINE L1 -456 5391 5175 1 871 749 260 46 10 chrX 37615309 37615503 -129034793 + Lx9 LINE L1 7125 7325 -319 1 871 297 0 0 0 chrX 37615575 37615608 -129034688 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 871 687 276 27 11 chrX 37615772 37615959 -129034337 - B3A SINE B2 -3 195 6 1 871 495 316 5 109 chrX 37616513 37616705 -129033591 + MER31B LTR ERV1 13 184 -282 1 871 787 356 13 16 chrX 37616715 37617026 -129033270 + MER54B LTR ERVL 8 317 -476 1 871 24 77 0 0 chrX 37617185 37617237 -129033059 + AT_rich Low_complexity Low_complexity 1 52 0 1 108 1193 297 28 7 chrX 37617517 37617862 -129032434 - Lx5 LINE L1 -17 7033 6719 1 872 29 0 0 0 chrX 37618690 37618719 -129031577 + AT_rich Low_complexity Low_complexity 1 29 0 2 872 960 339 72 5 chrX 37619237 37619670 -129030626 - Lx8 LINE L1 -427 7046 6585 2 872 23 54 0 0 chrX 37619677 37619714 -129030582 + AT_rich Low_complexity Low_complexity 1 37 0 2 872 1495 102 108 20 chrX 37619810 37620060 -129030236 - L1Md_F2 LINE L1 -2 6580 6309 2 872 546 143 0 0 chrX 37620715 37620806 -129029490 + (CATA)n Simple_repeat Simple_repeat 2 92 0 2 872 824 199 117 19 chrX 37620824 37621029 -129029267 + URR1A DNA MER1_type 2 226 0 2 872 316 303 30 0 chrX 37621377 37621509 -129028787 - Lx2B LINE L1 -2 6998 6863 2 872 5738 214 25 20 chrX 37621510 37622752 -129027544 - Lx2B LINE L1 -46 6954 5707 2 872 1300 203 99 19 chrX 37622752 37622941 -129027355 - RMER17C LTR ERVK 0 410 215 2 872 537 16 0 0 chrX 37622941 37623003 -129027293 + (GA)n Simple_repeat Simple_repeat 2 63 0 2 872 1300 203 99 19 chrX 37623003 37623175 -129027121 - RMER17C LTR ERVK -196 214 20 2 872 3357 162 108 0 chrX 37623175 37623843 -129026453 - L1_Mur2 LINE L1 -173 5704 4965 2 872 1897 217 37 34 chrX 37626401 37626896 -129023400 - Lx2B LINE L1 -75 6925 6146 2 872 219 103 0 0 chrX 37626986 37627025 -129023271 + (T)n Simple_repeat Simple_repeat 1 39 0 2 872 639 273 150 23 chrX 37627090 37627517 -129022779 + L1M2 LINE L1 3390 3870 -2273 2 872 577 250 167 0 chrX 37627520 37627688 -129022608 - MTD LTR MaLR -2 417 222 2 872 416 258 22 22 chrX 37627676 37627811 -129022485 - MTC-int LTR MaLR -451 807 673 2 872 282 275 43 21 chrX 37627792 37627856 -129022440 - MT2A LTR ERVL -116 417 351 2 872 1239 68 17 6 chrX 37627856 37628034 -129022262 + L1Md_F2 LINE L1 6401 6580 -2 2 872 282 275 43 21 chrX 37628034 37628062 -129022234 - MT2A LTR ERVL -183 350 323 2 872 353 266 117 18 chrX 37628222 37628333 -129021963 - MTD LTR MaLR -257 122 1 2 872 271 190 14 57 chrX 37628347 37628445 -129021851 + L1_Rod LINE L1 3858 3979 -2167 2 872 412 333 22 22 chrX 37628451 37628589 -129021707 + B1_Mur1 SINE Alu 9 146 -3 2 872 253 267 86 83 chrX 37628597 37628875 -129021421 + L1_Rod LINE L1 3958 4236 -1904 2 872 23 54 0 0 chrX 37628966 37629003 -129021293 + AT_rich Low_complexity Low_complexity 1 37 0 2 872 1087 257 37 48 chrX 37629298 37629650 -129020646 - L1_Mur3 LINE L1 -233 5647 5300 2 872 7076 154 16 36 chrX 37629649 37631396 -129018900 + Lx3B LINE L1 5270 6970 -3 2 872 1942 267 110 23 chrX 37631425 37632208 -129018088 - L1_Mur3 LINE L1 -564 5316 4466 2 872 588 111 0 0 chrX 37632216 37632306 -129017990 + (TA)n Simple_repeat Simple_repeat 2 91 0 2 872 270 246 92 79 chrX 37632310 37632539 -129017757 - L1_Mur3 LINE L1 -2164 3713 3482 2 872 664 284 56 10 chrX 37632539 37632735 -129017561 - B3 SINE B2 -10 206 2 2 872 248 240 39 39 chrX 37632738 37632816 -129017480 - L1_Mur3 LINE L1 -2405 3475 3398 2 872 543 173 0 0 chrX 37632829 37632939 -129017357 + (TA)n Simple_repeat Simple_repeat 1 110 0 2 872 333 268 6 75 chrX 37632961 37633179 -129017117 - L1_Mur3 LINE L1 -2474 3373 3175 2 872 3704 238 124 36 chrX 37633303 37634525 -129015771 - Lx9 LINE L1 -192 7452 6124 2 872 2750 196 18 8 chrX 37634524 37635082 -129015214 - Lx2A1 LINE L1 -619 6389 5820 2 872 4125 182 17 4 chrX 37635106 37635392 -129014904 + Lx2 LINE L1 5100 5394 -483 2 872 2741 31 3 3 chrX 37635392 37635719 -129014577 + IAPLTR2b LTR ERVK 1 327 0 2 872 9102 137 4 16 chrX 37635719 37637337 -129012959 + Lx2 LINE L1 5395 6997 0 2 872 2027 159 49 3 chrX 37637371 37637736 -129012560 + L1_Mm LINE L1 5441 5822 -61 2 872 2759 206 63 29 chrX 37637727 37638446 -129011850 - L1_Rod LINE L1 -370 5477 4735 2 872 309 89 0 0 chrX 37638456 37638501 -129011795 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 2 872 316 254 86 78 chrX 37638509 37638765 -129011531 - L1_Rod LINE L1 -1091 4756 4499 2 872 1936 255 43 26 chrX 37638761 37639025 -129011271 + L1_Mur3 LINE L1 4658 4915 -965 2 872 477 0 0 0 chrX 37639025 37639078 -129011218 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 872 479 17 17 0 chrX 37639078 37639137 -129011159 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 872 1936 255 43 26 chrX 37639137 37639450 -129010846 + L1_Mur3 LINE L1 4916 5244 -636 2 872 1183 277 61 27 chrX 37639443 37640036 -129010260 - L1_Mur3 LINE L1 -2869 3011 2399 2 872 2331 114 22 24 chrX 37640102 37640471 -129009825 + RLTR9A LTR ERVK 1 368 0 2 872 2828 287 57 23 chrX 37640676 37641949 -129008347 + Lx7 LINE L1 4429 5743 -1953 2 872 432 0 0 0 chrX 37641949 37641997 -129008299 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 872 681 241 124 23 chrX 37641997 37642066 -129008230 + Lx7 LINE L1 5744 5828 -1868 2 872 657 291 167 13 chrX 37642088 37642621 -129007675 + L1M2 LINE L1 4660 5274 -869 2 872 360 0 0 0 chrX 37642673 37642713 -129007583 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 872 213 39 0 0 chrX 37642713 37642738 -129007558 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 872 324 269 189 12 chrX 37642828 37642997 -129007299 - CYRA11_Mm Unknown Y-chromosome -233 384 186 2 872 590 199 28 49 chrX 37642876 37643019 -129007277 + URR1B DNA MER1_type 86 225 0 2 872 878 205 36 31 chrX 37643415 37643637 -129006659 - RMER1C Other Other 0 1342 1120 2 872 2511 157 93 0 chrX 37643648 37644099 -129006197 + Lx4A LINE L1 6563 7055 -3 2 872 22 0 0 0 chrX 37644099 37644121 -129006175 + AT_rich Low_complexity Low_complexity 1 22 0 2 872 1099 35 6 39 chrX 37644167 37644347 -129005949 + (TTCC)n Simple_repeat Simple_repeat 3 176 0 2 872 3840 98 36 25 chrX 37644389 37644977 -129005319 - Lx LINE L1 -6 6648 6055 2 872 221 322 81 0 chrX 37645171 37645258 -129005038 - MIRm SINE MIR 0 276 183 2 872 315 291 0 23 chrX 37645328 37645416 -129004880 - PB1D7 SINE Alu -26 94 9 2 872 215 203 17 0 chrX 37645684 37645743 -129004553 + CT-rich Low_complexity Low_complexity 3 62 0 2 872 22 35 0 0 chrX 37647149 37647178 -129003118 + AT_rich Low_complexity Low_complexity 1 29 0 2 872 249 87 83 55 chrX 37647298 37647407 -129002889 + (TA)n Simple_repeat Simple_repeat 1 112 0 2 872 400 193 12 12 chrX 37647413 37647497 -129002799 - Lx9 LINE L1 -307 7337 7254 2 872 21 0 0 0 chrX 37647831 37647852 -129002444 + AT_rich Low_complexity Low_complexity 1 21 0 2 872 360 0 0 0 chrX 37648083 37648123 -129002173 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 872 432 0 0 0 chrX 37648123 37648170 -129002126 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 872 26 30 0 0 chrX 37648314 37648347 -129001949 + AT_rich Low_complexity Low_complexity 1 33 0 2 872 273 29 0 0 chrX 37649670 37649704 -129000592 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 872 210 71 0 0 chrX 37649704 37649732 -129000564 + (TCTCCC)n Simple_repeat Simple_repeat 1 28 0 2 872 286 325 42 17 chrX 37650447 37650566 -128999730 - MIR3 SINE MIR -8 200 79 2 872 23 33 0 0 chrX 37650580 37650610 -128999686 + AT_rich Low_complexity Low_complexity 1 30 0 2 872 896 327 45 45 chrX 37650682 37651079 -128999217 - Lx8 LINE L1 -969 6727 6331 2 872 757 236 38 25 chrX 37651080 37651315 -128998981 - Lx9 LINE L1 -569 7075 6838 2 872 1023 117 7 0 chrX 37651328 37651482 -128998814 + B2_Mm1t SINE B2 1 155 -38 2 872 898 53 0 0 chrX 37651484 37651598 -128998698 + B1_Mus1 SINE Alu 35 148 0 2 872 25 0 0 0 chrX 37651610 37651635 -128998661 + AT_rich Low_complexity Low_complexity 1 25 0 2 872 954 263 164 36 chrX 37651896 37652369 -128997927 - RMER6D LTR ERVK -151 539 9 2 872 416 284 57 36 chrX 37652387 37652665 -128997631 - Lx8 LINE L1 -1601 6095 5807 2 872 2799 49 62 8 chrX 37652667 37653035 -128997261 - RLTR10 LTR ERVK -2 388 1 2 872 8260 43 3 2 chrX 37653035 37654031 -128996265 - RLTR10-int LTR ERVK -1 1986 990 2 872 285 248 49 61 chrX 37654113 37654276 -128996020 - RLTR10-int LTR ERVK -5987 1594 1434 2 872 3915 31 43 1 chrX 37654320 37654909 -128995387 - RLTR10-int LTR ERVK -995 992 302 2 872 274 172 57 123 chrX 37654909 37655015 -128995281 - RLTR10 LTR ERVK 0 390 292 2 872 1382 58 6 0 chrX 37655040 37655211 -128995085 - RLTR10-int LTR ERVK -1775 212 41 2 872 2665 64 78 0 chrX 37655223 37655583 -128994713 - RLTR10 LTR ERVK -2 388 1 2 872 654 273 33 14 chrX 37655583 37655836 -128994460 - Lx8 LINE L1 -1884 5812 5552 2 872 279 0 0 0 chrX 37655886 37655917 -128994379 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2 872 784 179 21 21 chrX 37656022 37656165 -128994131 - B1_Mur4 SINE Alu -7 143 1 2 872 13486 26 2 0 chrX 37656270 37657855 -128992441 - L1_Mm LINE L1 -81 5802 4214 2 872 33055 21 1 148 chrX 37657852 37665156 -128985140 - L1Md_T LINE L1 0 6582 416 2 872 552 284 74 50 chrX 37665623 37666138 -128984158 - L1MA9 LINE L1 -13 6299 5773 2 872 24 0 0 0 chrX 37666179 37666203 -128984093 + AT_rich Low_complexity Low_complexity 1 24 0 2 872 598 287 56 68 chrX 37666427 37666764 -128983532 - L1MA6 LINE L1 -369 5931 5599 2 872 29054 81 76 7 chrX 37666770 37672283 -128978013 - L1Md_F2 LINE L1 -15 6567 654 2 872 649 303 39 36 chrX 37672299 37672802 -128977494 - L1MA6 LINE L1 -683 5608 5106 2 872 1752 160 10 3 chrX 37672983 37673277 -128977019 - Lx3B LINE L1 -2 6971 6676 2 872 315 222 62 0 chrX 37673365 37673446 -128976850 - B1_Mur2 SINE Alu 0 149 64 2 872 6205 97 30 8 chrX 37673446 37674380 -128975916 + Lx3_Mus LINE L1 6031 6985 -24 2 872 270 0 0 0 chrX 37674380 37674410 -128975886 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 2 872 277 274 16 16 chrX 37674429 37674492 -128975804 - B1_Mus2 SINE Alu -84 63 1 2 872 233 213 0 0 chrX 37675249 37675310 -128974986 + T-rich Low_complexity Low_complexity 1 61 0 2 872 1170 43 0 0 chrX 37675311 37675452 -128974844 - B1_Mm SINE Alu -6 141 1 2 872 294 338 72 57 chrX 37676714 37677047 -128973249 - L1M3e LINE L1 -6651 379 42 2 872 7264 18 0 4 chrX 37677291 37678116 -128972180 - RLTR13B2 LTR ERVK 0 822 1 2 872 318 332 117 25 chrX 37678795 37679076 -128971220 - L1MD LINE L1 -1798 4348 4042 2 872 21 0 0 0 chrX 37679288 37679309 -128970987 + AT_rich Low_complexity Low_complexity 1 21 0 2 872 8262 92 14 2 chrX 37679715 37680918 -128969378 - Lx3A LINE L1 -521 5365 4149 2 872 4602 109 11 13 chrX 37680918 37681869 -128968427 + Lx3A LINE L1 5368 6305 -676 2 872 432 311 92 0 chrX 37681864 37682028 -128968268 + Lx8 LINE L1 6864 7042 -431 2 872 354 304 43 17 chrX 37682109 37682226 -128968070 + Lx8 LINE L1 7032 7151 -322 2 872 434 313 53 4 chrX 37682284 37682512 -128967784 - Lx8 LINE L1 -51 7422 7184 2 872 253 324 81 47 chrX 37682599 37682748 -128967548 + B3 SINE B2 61 214 -2 2 872 372 294 51 65 chrX 37682951 37683166 -128967130 + L1M4 LINE L1 2201 2412 -3734 2 872 384 323 60 0 chrX 37683444 37683577 -128966719 - B1F1 SINE Alu 0 149 9 2 872 3109 241 42 14 chrX 37684479 37685261 -128965035 - Lx7 LINE L1 -504 7192 6389 2 872 342 0 0 0 chrX 37685261 37685299 -128964997 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 872 9613 158 23 38 chrX 37685299 37688009 -128962287 - Lx LINE L1 -23 6631 3981 2 872 1472 89 16 35 chrX 37688002 37688258 -128962038 - MusHAL1 LINE L1 -1789 923 673 2 872 495 67 22 11 chrX 37688809 37688899 -128961397 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 3 872 25 0 0 0 chrX 37688937 37688962 -128961334 + AT_rich Low_complexity Low_complexity 1 25 0 3 872 21 36 0 0 chrX 37691075 37691103 -128959193 + AT_rich Low_complexity Low_complexity 1 28 0 3 872 3720 259 93 22 chrX 37691333 37692382 -128957914 - Lx6 LINE L1 0 7460 6337 3 872 844 96 8 0 chrX 37692577 37692702 -128957594 + L1_Mm LINE L1 5162 5287 -596 3 872 426 305 331 0 chrX 37693019 37693170 -128957126 + B3 SINE B2 1 201 -15 3 872 2425 174 45 6 chrX 37694245 37695031 -128955265 + L1_Mur1 LINE L1 830 1659 -4227 3 872 3948 69 2 13 chrX 37695031 37695557 -128954739 + L1_Mus1 LINE L1 6031 6550 -17 3 872 4813 160 14 6 chrX 37695570 37696473 -128953823 + L1_Mur1 LINE L1 3491 4401 -1485 3 872 5520 68 23 5 chrX 37696475 37697392 -128952904 - L1Md_F2 LINE L1 -1 6565 5587 3 872 1653 86 0 0 chrX 37697397 37697629 -128952667 - L1Md_F2 LINE L1 -529 5354 5123 3 872 8284 156 25 6 chrX 37697625 37699087 -128951209 + L1_Mur1 LINE L1 4386 5877 -9 3 872 3251 188 19 6 chrX 37699087 37699708 -128950588 + Lx2B LINE L1 6372 7000 0 3 872 498 337 88 16 chrX 37699802 37699995 -128950301 + B3A SINE B2 6 212 -4 3 872 342 366 21 21 chrX 37700267 37700412 -128949884 + RSINE1 SINE B4 5 149 -16 3 872 526 248 144 0 chrX 37701144 37701269 -128949027 - B3A SINE B2 -55 143 1 3 872 21 36 0 0 chrX 37701593 37701621 -128948675 + AT_rich Low_complexity Low_complexity 1 28 0 3 872 1026 68 0 15 chrX 37701718 37701852 -128948444 - B1_Mus1 SINE Alu -15 133 2 3 872 278 270 87 29 chrX 37702837 37702940 -128947356 - PB1D10 SINE Alu 0 117 9 3 872 288 0 0 0 chrX 37703221 37703253 -128947043 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 872 279 0 0 0 chrX 37704133 37704164 -128946132 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 872 1170 126 6 0 chrX 37706255 37706438 -128943858 - RMER17D2 LTR ERVK 0 809 626 3 872 761 68 0 10 chrX 37706434 37706538 -128943758 - RMER17D2 LTR ERVK -706 103 1 3 872 21 57 0 0 chrX 37706731 37706766 -128943530 + AT_rich Low_complexity Low_complexity 1 35 0 3 872 214 184 0 0 chrX 37707369 37707407 -128942889 + GA-rich Low_complexity Low_complexity 3 40 0 3 872 502 302 36 0 chrX 37707519 37707658 -128942638 - B1F SINE Alu 0 149 6 3 872 2794 143 53 8 chrX 37708528 37709021 -128941275 + Lx LINE L1 6137 6651 -3 3 872 405 0 0 0 chrX 37709117 37709162 -128941134 + (TTA)n Simple_repeat Simple_repeat 2 46 0 3 872 272 265 147 0 chrX 37710059 37710161 -128940135 - MIR SINE MIR -56 206 90 3 872 3442 100 0 22 chrX 37710833 37711343 -128938953 + Lx LINE L1 6148 6646 -8 3 872 228 158 17 34 chrX 37711680 37711739 -128938557 + T-rich Low_complexity Low_complexity 1 58 0 3 872 1346 237 22 19 chrX 37711800 37712122 -128938174 - Lx7 LINE L1 -685 7011 6689 3 872 2690 210 10 119 chrX 37712138 37712444 -128937852 + RMER19C LTR ERVK 1 270 -341 3 872 3472 25 0 0 chrX 37712444 37712840 -128937456 + MTA_Mm LTR MaLR 1 396 0 3 872 2690 210 10 119 chrX 37712840 37713219 -128937077 + RMER19C LTR ERVK 271 611 0 3 872 1674 177 50 20 chrX 37713299 37713657 -128936639 + L1_Mur3 LINE L1 4646 5014 -866 3 872 28 0 0 0 chrX 37713920 37713948 -128936348 + AT_rich Low_complexity Low_complexity 1 28 0 3 872 4986 119 87 1 chrX 37713953 37714760 -128935536 - Lx3A LINE L1 -10 6971 6096 3 872 23 54 0 0 chrX 37714782 37714819 -128935477 + AT_rich Low_complexity Low_complexity 1 37 0 3 872 1811 142 40 17 chrX 37714855 37715195 -128935101 - RLTR44B LTR ERVK 0 405 1 3 872 26 74 0 0 chrX 37715252 37715306 -128934990 + AT_rich Low_complexity Low_complexity 1 54 0 3 872 500 264 13 19 chrX 37715328 37715486 -128934810 - L1M2 LINE L1 -803 5497 5341 3 872 261 0 0 0 chrX 37715498 37715527 -128934769 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 872 1075 73 7 0 chrX 37715527 37715664 -128934632 - B1_Mus1 SINE Alu -9 139 2 3 872 360 378 0 6 chrX 37715805 37715962 -128934334 - Lx8 LINE L1 -244 7229 7074 3 872 2157 307 42 25 chrX 37716049 37716897 -128933399 - Lx8 LINE L1 -430 7043 6181 3 872 540 111 0 0 chrX 37716897 37716978 -128933318 + (TA)n Simple_repeat Simple_repeat 1 81 0 3 872 307 161 69 40 chrX 37717022 37717197 -128933099 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 872 299 221 33 50 chrX 37717120 37717301 -128932995 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 3 872 2092 131 220 42 chrX 37717407 37717879 -128932417 - RLTR6_Mm LTR ERV1 -62 592 37 3 872 296 179 209 0 chrX 37717919 37717986 -128932310 - RLTR6_Mm LTR ERV1 -573 81 1 3 872 45558 33 14 1 chrX 37717986 37725560 -128924736 - RLTR6-int LTR ERV1 0 7778 1 3 872 2070 138 215 43 chrX 37725561 37726045 -128924251 - RLTR6_Mm LTR ERV1 -51 603 37 3 872 284 194 209 0 chrX 37726085 37726152 -128924144 - RLTR6_Mm LTR ERV1 -573 81 1 3 872 2169 188 80 94 chrX 37726179 37726879 -128923417 - RMER6C LTR ERVK 0 690 1 3 872 274 279 62 0 chrX 37726881 37727010 -128923286 - L1M2 LINE L1 -847 5296 5160 3 872 371 309 30 67 chrX 37728058 37728193 -128922103 + MER5A1 DNA MER1_type 37 166 0 3 872 420 20 0 0 chrX 37728803 37728852 -128921444 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 872 423 0 0 0 chrX 37728852 37728898 -128921398 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 872 297 51 0 0 chrX 37728963 37729002 -128921294 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 872 679 261 42 5 chrX 37729817 37730029 -128920267 - L1MEg LINE L1 -3289 2857 2638 3 872 900 123 43 0 chrX 37730233 37730371 -128919925 + B1_Mm SINE Alu 4 147 0 3 872 183 80 0 0 chrX 37730371 37730396 -128919900 + (A)n Simple_repeat Simple_repeat 1 25 0 3 872 21 0 0 0 chrX 37730477 37730498 -128919798 + AT_rich Low_complexity Low_complexity 1 21 0 3 872 632 264 14 14 chrX 37730677 37730819 -128919477 - B1_Mur2 SINE Alu -2 147 6 3 872 277 258 178 13 chrX 37731356 37731513 -128918783 - L1MEg LINE L1 -4220 2022 1840 3 872 1534 148 26 0 chrX 37731824 37732088 -128918208 + Lx3B LINE L1 6702 6972 -1 3 872 369 0 0 0 chrX 37732093 37732134 -128918162 + (TAA)n Simple_repeat Simple_repeat 2 42 0 3 872 218 104 27 82 chrX 37732791 37732864 -128917432 + (TATAA)n Simple_repeat Simple_repeat 1 69 0 3 872 25 31 0 0 chrX 37733070 37733102 -128917194 + AT_rich Low_complexity Low_complexity 1 32 0 3 872 5163 58 5 3 chrX 37733145 37733815 -128916481 + L1Md_F2 LINE L1 5912 6582 0 3 872 207 0 0 0 chrX 37734566 37734589 -128915707 + (T)n Simple_repeat Simple_repeat 1 23 0 3 872 22 0 0 0 chrX 37734615 37734637 -128915659 + AT_rich Low_complexity Low_complexity 1 22 0 3 872 21 36 0 0 chrX 37736109 37736137 -128914159 + AT_rich Low_complexity Low_complexity 1 28 0 3 872 21 0 0 0 chrX 37736256 37736277 -128914019 + AT_rich Low_complexity Low_complexity 1 21 0 3 872 3688 128 90 13 chrX 37736303 37736672 -128913624 - RLTR33 LTR ERVK -6 672 264 3 872 2772 101 34 0 chrX 37736672 37737080 -128913216 + BGLII_Mus LTR ERVK 1 422 0 3 872 3688 128 90 13 chrX 37737080 37737334 -128912962 - RLTR33 LTR ERVK -415 263 1 3 872 239 333 97 0 chrX 37737806 37737899 -128912397 + MER81 DNA AcHobo 1 102 -12 3 872 200 375 14 0 chrX 37737913 37737985 -128912311 - L3 LINE CR1 -422 4067 3995 3 872 1913 157 14 59 chrX 37738846 37739243 -128911053 + RMER6A LTR ERVK 3 363 -327 3 872 1128 76 7 0 chrX 37739243 37739387 -128910909 - B1_Mus2 SINE Alu 0 147 3 3 872 2053 187 22 22 chrX 37739387 37739804 -128910492 + RMER6A LTR ERVK 334 749 -7 3 872 248 369 36 0 chrX 37740182 37740266 -128910030 + MLT1H2 LTR MaLR 40 126 -363 3 872 4710 131 7 254 chrX 37740379 37740690 -128909606 + Lx4A LINE L1 4742 5013 -864 3 872 346 274 59 0 chrX 37740690 37740792 -128909504 - RMER2 LTR ERV1 -2 565 458 3 872 4710 131 7 254 chrX 37740792 37740839 -128909457 + Lx4A LINE L1 5014 5054 -823 3 872 692 206 40 14 chrX 37740839 37740987 -128909309 - RMER2 LTR ERV1 -342 225 74 3 872 4710 131 7 254 chrX 37740987 37741232 -128909064 + Lx4A LINE L1 5055 5271 -606 3 872 1377 72 0 0 chrX 37741232 37741412 -128908884 + L1_Mus1 LINE L1 6387 6566 -1 3 872 4710 139 10 155 chrX 37741412 37742528 -128907768 + Lx4A LINE L1 5272 6347 -711 3 872 7272 71 20 0 chrX 37742560 37743505 -128906791 - L1_Mus2 LINE L1 -1 6565 5602 3 872 3739 188 27 3 chrX 37743517 37744222 -128906074 + Lx4A LINE L1 6335 7056 -2 3 872 243 214 29 0 chrX 37744644 37744714 -128905582 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 3 872 606 73 0 0 chrX 37745990 37746072 -128904224 - L1_Mus2 LINE L1 -165 6473 6360 3 872 393 20 0 0 chrX 37747137 37747187 -128903109 - L1_Mus2 LINE L1 -2 6564 6515 3 872 210 214 35 18 chrX 37747298 37747355 -128902941 - MIR SINE MIR -106 156 99 3 872 28 0 0 0 chrX 37747499 37747527 -128902769 + AT_rich Low_complexity Low_complexity 1 28 0 3 872 807 272 128 18 chrX 37747732 37748013 -128902283 + Lx3C LINE L1 6665 6976 0 3 873 252 0 0 0 chrX 37748746 37748774 -128901522 + (TA)n Simple_repeat Simple_repeat 1 28 0 3 873 1382 339 88 26 chrX 37749091 37749902 -128900394 - Lx8 LINE L1 -376 7097 6237 3 873 453 187 49 35 chrX 37750157 37750301 -128899995 - Lx8 LINE L1 -1581 5892 5747 3 873 519 17 0 0 chrX 37750405 37750465 -128899831 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 3 873 227 277 29 86 chrX 37750651 37750825 -128899471 + L1_Mur3 LINE L1 4520 4683 -1197 3 873 302 280 28 131 chrX 37750828 37750935 -128899361 - ID_B1 SINE B4 -128 96 1 3 873 432 299 21 0 chrX 37751065 37751209 -128899087 + L1_Mur3 LINE L1 4760 4906 -974 3 873 1039 350 52 37 chrX 37751622 37752250 -128898046 - Charlie25 DNA MER1_type -228 2296 1659 3 873 1225 128 0 6 chrX 37752467 37752648 -128897648 + B2_Mm2 SINE B2 1 180 -15 3 873 1797 179 45 0 chrX 37753464 37753799 -128896497 - ORR1A4-int LTR MaLR -1613 350 1 3 873 1029 152 6 18 chrX 37753801 37753968 -128896328 - ORR1A4 LTR MaLR -2 327 163 3 873 5446 182 120 24 chrX 37753991 37755558 -128894738 + Lx5 LINE L1 872 2589 -3288 3 873 307 116 0 0 chrX 37755562 37755605 -128894691 - ORR1A4 LTR MaLR -8 321 279 3 873 7594 191 53 31 chrX 37755603 37756729 -128893567 - ORR1A4-int LTR MaLR -254 1709 561 3 873 239 54 27 0 chrX 37756729 37756766 -128893530 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 3 873 7594 191 53 31 chrX 37756766 37757311 -128892985 - ORR1A4-int LTR MaLR -1403 560 1 3 873 1835 168 19 9 chrX 37757313 37757637 -128892659 - ORR1A4 LTR MaLR -2 327 1 3 873 1358 149 3 5 chrX 37757637 37757883 -128892413 + Lx5 LINE L1 2586 2839 -1075 3 873 1584 228 53 31 chrX 37757938 37758769 -128891527 + L1_Mur2 LINE L1 37 802 -5500 3 873 219 125 50 0 chrX 37758769 37758809 -128891487 + GA-rich Low_complexity Low_complexity 2 43 0 3 873 673 146 41 7 chrX 37758811 37758956 -128891340 + Lx5 LINE L1 3047 3196 -2681 3 873 413 230 29 20 chrX 37759366 37759468 -128890828 + RLTR23 LTR ERV1 324 426 -4 3 873 11396 163 69 73 chrX 37759471 37760030 -128890266 + Lx5 LINE L1 3169 3733 -2144 3 873 3064 78 0 8 chrX 37760030 37760429 -128889867 - MTA_Mm LTR MaLR 0 396 1 3 873 11396 181 59 49 chrX 37760429 37763706 -128886590 + Lx5 LINE L1 3734 7049 -1 3 873 878 105 13 32 chrX 37763765 37763923 -128886373 - L1Md_F2 LINE L1 -5 6577 6423 3 873 3743 41 0 7 chrX 37763918 37764381 -128885915 + L1Md_F2 LINE L1 6120 6579 -3 3 873 25 0 0 0 chrX 37764381 37764406 -128885890 + AT_rich Low_complexity Low_complexity 1 25 0 3 873 3556 55 36 6 chrX 37764406 37764878 -128885418 - L1Md_F2 LINE L1 -141 6441 5956 3 873 267 31 0 0 chrX 37766434 37766466 -128883830 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 873 193 394 64 0 chrX 37766563 37766657 -128883639 + MIRb SINE MIR 51 150 -118 3 873 244 0 56 0 chrX 37767069 37767105 -128883191 + (TTTTTA)n Simple_repeat Simple_repeat 5 42 0 4 873 574 66 0 0 chrX 37767105 37767181 -128883115 - B1_Mm SINE Alu 0 147 72 4 873 191 235 176 0 chrX 37767280 37767331 -128882965 - L3b LINE CR1 -270 212 153 4 873 4018 181 40 4 chrX 37767393 37768147 -128882149 - Lx4B LINE L1 -5 7053 6273 4 873 3647 155 10 60 chrX 37768147 37768786 -128881510 + Lx4B LINE L1 5207 5818 -59 4 873 1491 159 22 203 chrX 37768786 37769283 -128881013 - RMER17C LTR ERVK -3 407 1 4 873 3647 185 9 62 chrX 37769283 37769714 -128880582 + Lx4B LINE L1 5819 6251 -807 4 873 464 122 12 0 chrX 37769860 37769942 -128880354 + (CA)n Simple_repeat Simple_repeat 2 84 0 4 873 1368 158 16 20 chrX 37770482 37770727 -128879569 - RMER6C LTR ERVK -446 244 1 4 873 2171 197 3 0 chrX 37770765 37771150 -128879146 + ORR1B1 LTR MaLR 1 386 -8 4 873 1715 186 22 0 chrX 37771154 37771476 -128878820 + ORR1B1-int LTR MaLR 1 329 -1180 4 873 2276 209 65 10 chrX 37771475 37771996 -128878300 + ORR1B1-int LTR MaLR 960 1509 0 4 873 1205 210 179 0 chrX 37771996 37772287 -128878009 + ORR1B1 LTR MaLR 1 343 -51 4 873 1118 250 87 49 chrX 37772305 37772675 -128877621 + Lx2B LINE L1 6611 6994 -6 4 873 1037 102 7 0 chrX 37772684 37772831 -128877465 + B1_Mus1 SINE Alu 1 148 0 4 873 6700 71 11 0 chrX 37772832 37773709 -128876587 + L1Md_F2 LINE L1 5682 6568 -14 4 873 40 21 0 0 chrX 37773713 37773760 -128876536 + AT_rich Low_complexity Low_complexity 1 47 0 4 873 33 0 0 0 chrX 37773925 37773958 -128876338 + AT_rich Low_complexity Low_complexity 1 33 0 4 873 470 314 54 73 chrX 37774000 37774354 -128875942 - Lx8 LINE L1 -418 7055 6709 4 873 1060 335 62 32 chrX 37774442 37774973 -128875323 - Lx9 LINE L1 -517 7127 6581 4 873 1783 304 12 38 chrX 37776247 37776849 -128873447 + Lx6 LINE L1 6855 7440 -20 4 873 30 45 0 0 chrX 37776849 37776893 -128873403 + AT_rich Low_complexity Low_complexity 1 44 0 4 873 21 36 0 0 chrX 37777419 37777447 -128872849 + AT_rich Low_complexity Low_complexity 1 28 0 4 873 3738 46 4 0 chrX 37777577 37778035 -128872261 + L1Md_T LINE L1 6122 6581 -1 4 873 638 324 31 18 chrX 37778192 37778415 -128871881 - MTEb LTR MaLR 0 379 154 4 873 2069 233 98 37 chrX 37778446 37779102 -128871194 - Lx7 LINE L1 -1 7695 7000 4 873 3617 63 6 34 chrX 37779102 37779408 -128870888 - L1Md_F2 LINE L1 0 6582 6293 4 873 2209 95 119 11 chrX 37779408 37779760 -128870536 + RLTR10 LTR ERVK 1 390 0 4 873 3617 63 6 34 chrX 37779760 37779949 -128870347 - L1Md_F2 LINE L1 -290 6292 6101 4 873 4042 36 10 0 chrX 37779949 37780631 -128869665 + L1Md_F2 LINE L1 5392 6080 -502 4 873 2575 234 66 35 chrX 37780625 37782470 -128867826 - Lx7 LINE L1 -3925 1955 484 4 873 290 270 109 10 chrX 37782494 37782595 -128867701 - MTEb LTR MaLR -251 128 18 4 873 374 231 16 0 chrX 37782787 37782908 -128867388 + (CATATA)n Simple_repeat Simple_repeat 4 126 0 4 873 229 328 0 0 chrX 37783057 37783118 -128867178 + B1F SINE Alu 68 128 -21 4 873 767 280 32 3 chrX 37783185 37783468 -128866828 + L1ME2 LINE L1 5873 6163 -1 4 873 396 0 0 0 chrX 37783768 37783812 -128866484 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 873 1412 169 10 37 chrX 37783992 37784287 -128866009 - Lx3A LINE L1 -3 6978 6692 4 873 2524 148 65 11 chrX 37784287 37784745 -128865551 - Lx3A LINE L1 -520 6461 5979 4 873 954 193 14 0 chrX 37784741 37784948 -128865348 - L1_Mur3 LINE L1 -4183 1697 1488 4 873 5418 124 2 32 chrX 37785171 37786047 -128864249 - Lx LINE L1 -3 6651 5802 4 873 6923 162 39 2 chrX 37786053 37787299 -128862997 + Lx LINE L1 4517 5809 -74 4 873 1133 186 64 4 chrX 37787292 37787518 -128862778 - L1_Mur3 LINE L1 -4378 1499 1261 4 873 195 42 0 0 chrX 37787518 37787542 -128862754 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 873 1133 245 50 66 chrX 37787542 37787956 -128862340 - L1_Mur3 LINE L1 -4617 1260 854 4 873 2378 130 29 31 chrX 37788313 37788372 -128861924 - RMER17D2 LTR ERVK -359 450 395 4 873 3000 81 2 5 chrX 37788372 37788769 -128861527 - MTA_Mm LTR MaLR 0 396 1 4 873 2378 130 29 31 chrX 37788769 37789160 -128861136 - RMER17D2 LTR ERVK -415 394 1 4 873 654 302 24 0 chrX 37789174 37789386 -128860910 - Lx8 LINE L1 -948 6525 6309 4 873 278 89 0 0 chrX 37790419 37790464 -128859832 - ORR1A4-int LTR MaLR -1072 891 847 4 873 332 274 95 0 chrX 37790465 37790560 -128859736 - MT2B2 LTR ERVL -327 257 154 4 873 1138 176 98 13 chrX 37790566 37790802 -128859494 - MT2B LTR ERVL -345 256 1 4 873 3485 172 72 48 chrX 37790802 37791372 -128858924 - ORR1A4-int LTR MaLR -1372 591 3 4 873 1682 166 6 104 chrX 37791378 37791734 -128858562 - ORR1A4 LTR MaLR -8 321 1 4 873 25 0 0 0 chrX 37791757 37791782 -128858514 + AT_rich Low_complexity Low_complexity 1 25 0 4 873 1057 323 43 12 chrX 37791855 37792525 -128857771 + L1_Mur3 LINE L1 1883 2573 -3307 4 873 183 156 0 0 chrX 37792727 37792759 -128857537 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 4 873 237 296 84 0 chrX 37793575 37793646 -128856650 - B3 SINE B2 -7 209 133 4 873 427 291 10 10 chrX 37793881 37793985 -128856311 - B3 SINE B2 -78 138 35 4 873 235 287 30 91 chrX 37795446 37795611 -128854685 - L1MA9 LINE L1 -134 6178 6024 4 873 227 338 22 43 chrX 37795832 37795971 -128854325 - LTR33 LTR ERVL -2 513 378 4 873 414 0 0 0 chrX 37796072 37796118 -128854178 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 873 246 116 0 0 chrX 37796169 37796212 -128854084 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 873 279 79 0 0 chrX 37796846 37796884 -128853412 + Lx3A LINE L1 6443 6480 -501 4 873 2265 117 71 6 chrX 37796884 37797238 -128853058 + Lx3A LINE L1 6598 6974 -7 4 873 26 0 0 0 chrX 37797271 37797297 -128852999 + AT_rich Low_complexity Low_complexity 1 26 0 4 873 2426 318 77 11 chrX 37797395 37798390 -128851906 - Lx9 LINE L1 -226 7418 6358 4 873 24 32 0 0 chrX 37798447 37798478 -128851818 + AT_rich Low_complexity Low_complexity 1 31 0 4 873 525 299 0 40 chrX 37798478 37798652 -128851644 - Lx6 LINE L1 -36 7424 7258 4 873 495 0 0 0 chrX 37798679 37798734 -128851562 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 873 258 81 0 0 chrX 37798734 37798770 -128851526 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 873 646 277 139 36 chrX 37799000 37799438 -128850858 - Lx9 LINE L1 -1678 5966 5448 4 873 932 245 53 77 chrX 37799565 37799969 -128850327 - MT2A LTR ERVL 0 601 94 4 873 2252 33 0 0 chrX 37799969 37800239 -128850057 - L1_Mus2 LINE L1 -517 6049 5780 4 873 1914 71 28 0 chrX 37800239 37800494 -128849802 + L1_Mus2 LINE L1 6305 6566 0 4 873 351 0 0 0 chrX 37800503 37800542 -128849754 + (TAA)n Simple_repeat Simple_repeat 1 39 0 4 873 2599 152 8 2 chrX 37800548 37800987 -128849309 - L1ME3 LINE L1 -265 5897 5469 4 873 421 350 70 0 chrX 37802408 37802665 -128847631 + MER58B DNA MER1_type 54 328 -13 4 873 584 276 89 23 chrX 37802995 37803343 -128846953 + L1MA8 LINE L1 4904 5274 -869 4 873 1253 306 61 13 chrX 37803569 37804273 -128846023 + L1MA8 LINE L1 5549 6286 -5 4 873 343 347 78 35 chrX 37804324 37804581 -128845715 - L1MC LINE L1 -1095 5051 4784 4 873 24 67 0 0 chrX 37804586 37804631 -128845665 + AT_rich Low_complexity Low_complexity 1 45 0 4 873 340 328 34 49 chrX 37804730 37804935 -128845361 - L1M3c LINE L1 -1980 4227 4026 4 873 290 305 0 0 chrX 37804978 37805037 -128845259 - tRNA-Ala-GCY_ tRNA tRNA -12 63 5 4 873 249 83 0 0 chrX 37805216 37805252 -128845044 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 4 873 199 133 0 43 chrX 37805279 37805326 -128844970 + C-rich Low_complexity Low_complexity 1 45 0 4 873 4435 206 118 28 chrX 37806170 37807464 -128842832 + Lx4A LINE L1 4269 5684 -1374 4 873 2510 36 10 0 chrX 37807462 37807764 -128842532 - L1_Mm LINE L1 -302 5581 5277 4 873 3955 79 25 16 chrX 37807765 37808316 -128841980 + L1Md_F2 LINE L1 6027 6582 0 4 873 569 196 0 178 chrX 37808318 37808498 -128841798 + Lx4A LINE L1 5671 5818 -59 4 873 312 27 0 0 chrX 37808506 37808543 -128841753 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 4 873 1087 94 6 6 chrX 37808544 37808704 -128841592 - B2_Mm2 SINE B2 -34 161 2 4 873 186 217 0 0 chrX 37808799 37808810 -128841486 + (TA)n Simple_repeat Simple_repeat 1 11 0 4 873 207 0 0 0 chrX 37808810 37808833 -128841463 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 873 186 217 0 0 chrX 37808833 37808867 -128841429 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 873 375 266 86 0 chrX 37808999 37809127 -128841169 - L1M3c LINE L1 -3820 2384 2246 4 873 4795 49 3 0 chrX 37809116 37809984 -128840312 - L1Md_F2 LINE L1 -432 6150 5280 4 873 2331 92 3 0 chrX 37809999 37810315 -128839981 - Lx3_Mus LINE L1 -42 5844 5528 4 873 8302 80 39 4 chrX 37810315 37810540 -128839756 + Lx3_Mus LINE L1 5804 6034 -975 4 873 507 17 0 0 chrX 37810540 37810600 -128839696 + (GGGA)n Simple_repeat Simple_repeat 1 60 0 4 873 8302 80 39 4 chrX 37810600 37811540 -128838756 + Lx3_Mus LINE L1 6035 7008 -1 4 873 23 0 0 0 chrX 37811540 37811563 -128838733 + AT_rich Low_complexity Low_complexity 1 23 0 4 873 45 34 0 0 chrX 37811965 37812024 -128838272 + AT_rich Low_complexity Low_complexity 1 59 0 4 873 7045 116 18 4 chrX 37812060 37813089 -128837207 + L1_Mus4 LINE L1 5587 6629 -7 4 873 486 289 26 26 chrX 37813149 37813266 -128837030 - RSINE1 SINE B4 -45 120 4 4 873 646 188 198 57 chrX 37813563 37813755 -128836541 - Lx5 LINE L1 0 7050 6832 4 873 324 191 0 0 chrX 37813749 37813812 -128836484 - Lx4B LINE L1 -364 6694 6632 4 873 388 172 62 41 chrX 37813802 37813899 -128836397 + Lx4A LINE L1 6684 6782 -276 4 873 3366 158 33 68 chrX 37813899 37814564 -128835732 - RLTR26 LTR ERVK 0 642 1 4 873 835 204 13 0 chrX 37814565 37814717 -128835579 + Lx5 LINE L1 6754 6907 -143 4 873 549 197 52 82 chrX 37814724 37814918 -128835378 - RMER17C LTR ERVK -222 188 1 4 873 25 0 0 0 chrX 37815186 37815211 -128835085 + AT_rich Low_complexity Low_complexity 1 25 0 4 873 5323 113 11 9 chrX 37815483 37816284 -128834012 + L1_Mus4 LINE L1 5834 6636 0 4 873 233 342 0 0 chrX 37816288 37816361 -128833935 + ID_B1 SINE B4 151 223 -1 4 873 303 93 0 0 chrX 37816361 37816404 -128833892 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 4 873 407 390 37 13 chrX 37816404 37816781 -128833515 - L1M3c LINE L1 -5752 389 4 4 873 315 0 0 0 chrX 37817201 37817236 -128833060 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 873 243 122 0 0 chrX 37817237 37817286 -128833010 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 4 873 29 0 0 0 chrX 37817286 37817315 -128832981 + AT_rich Low_complexity Low_complexity 1 29 0 4 873 21 71 0 0 chrX 37817821 37817863 -128832433 + AT_rich Low_complexity Low_complexity 1 42 0 4 873 4133 108 53 6 chrX 37817882 37818541 -128831755 - Lx3_Mus LINE L1 -1 7008 6319 4 873 23 33 0 0 chrX 37819870 37819900 -128830396 + AT_rich Low_complexity Low_complexity 1 30 0 4 873 1724 103 0 11 chrX 37820493 37820757 -128829539 - L1_Mus4 LINE L1 0 6636 6376 4 873 28 0 0 0 chrX 37820777 37820805 -128829491 + AT_rich Low_complexity Low_complexity 1 28 0 4 873 563 228 7 59 chrX 37820817 37820952 -128829344 - B3 SINE B2 -86 130 3 4 873 21 0 0 0 chrX 37822101 37822122 -128828174 + AT_rich Low_complexity Low_complexity 1 21 0 5 873 1524 319 108 66 chrX 37822147 37823161 -128827135 - Lx8 LINE L1 -527 6946 5891 5 873 477 0 0 0 chrX 37823203 37823256 -128827040 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 873 402 115 0 0 chrX 37823414 37823475 -128826821 + (TAAA)n Simple_repeat Simple_repeat 2 62 0 5 873 413 348 164 32 chrX 37823564 37823941 -128826355 + MTE-int LTR MaLR 44 470 -1110 5 873 16215 77 5 1 chrX 37824006 37826188 -128824108 - L1Md_F2 LINE L1 -84 5799 3609 5 873 6134 65 12 2 chrX 37826189 37826991 -128823305 + L1Md_F2 LINE L1 5773 6582 0 5 873 2398 165 66 6 chrX 37827024 37827530 -128822766 + Lx2B LINE L1 6356 6995 -5 5 873 441 119 178 0 chrX 37828095 37828196 -128822100 - Lx9 LINE L1 -6 7638 7520 5 873 536 349 74 0 chrX 37828243 37828283 -128822013 - B3 SINE B2 -6 210 167 5 873 333 47 0 0 chrX 37828283 37828326 -128821970 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 873 536 349 74 0 chrX 37828326 37828474 -128821822 - B3 SINE B2 -50 166 9 5 873 23 0 0 0 chrX 37828484 37828507 -128821789 + AT_rich Low_complexity Low_complexity 1 23 0 5 873 23 0 0 0 chrX 37829114 37829137 -128821159 + AT_rich Low_complexity Low_complexity 1 23 0 5 873 33074 17 1 7 chrX 37829475 37835683 -128814613 - L1Md_A LINE L1 0 6582 412 5 873 28 29 0 0 chrX 37835896 37835931 -128814365 + AT_rich Low_complexity Low_complexity 1 35 0 5 873 29 47 0 0 chrX 37836174 37836217 -128814079 + AT_rich Low_complexity Low_complexity 1 43 0 5 873 431 257 233 23 chrX 37837649 37837864 -128812432 + RMER4B LTR ERVK 17 276 -309 5 873 562 307 34 48 chrX 37837902 37838111 -128812185 + RMER4B LTR ERVK 369 574 -11 5 873 227 312 117 0 chrX 37838482 37838559 -128811737 - MER58A DNA MER1_type -17 207 122 5 873 385 289 63 40 chrX 37838570 37838696 -128811600 - MER58A DNA MER1_type -71 153 25 5 873 2944 83 2 2 chrX 37838962 37839360 -128810936 - MTB LTR MaLR 0 400 3 5 873 250 370 42 35 chrX 37839393 37839536 -128810760 + B1F SINE Alu 1 144 -5 5 873 285 146 0 0 chrX 37840232 37840280 -128810016 + (T)n Simple_repeat Simple_repeat 1 48 0 5 873 225 278 0 0 chrX 37840333 37840387 -128809909 - L2a LINE L2 -12 3414 3361 5 873 326 320 10 10 chrX 37840768 37840866 -128809430 + LTR88b LTR Gypsy? 740 837 0 5 873 24 67 0 0 chrX 37841123 37841168 -128809128 + AT_rich Low_complexity Low_complexity 1 45 0 5 873 432 200 98 15 chrX 37841450 37841582 -128808714 + Lx7 LINE L1 7491 7633 -63 5 873 234 237 0 17 chrX 37841631 37841691 -128808605 + Lx6 LINE L1 7385 7443 -17 5 873 231 310 56 72 chrX 37841749 37841800 -128808496 - RLTR18 LTR ERVK -161 455 334 5 873 240 370 0 0 chrX 37841800 37841873 -128808423 + ID4_ SINE ID 4 76 -7 5 873 207 0 0 0 chrX 37842470 37842493 -128807803 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 5 873 857 288 64 11 chrX 37843704 37844093 -128806203 + L1M2 LINE L1 2515 2922 -3221 5 873 5619 113 19 22 chrX 37844093 37844972 -128805324 + Lx LINE L1 5776 6652 -2 5 873 842 292 70 32 chrX 37844972 37845081 -128805215 + L1M2 LINE L1 2921 3032 -3108 5 873 554 284 32 20 chrX 37845085 37845333 -128804963 + L1M2 LINE L1 5029 5279 -864 5 873 309 358 15 49 chrX 37845418 37845621 -128804675 + Lx8 LINE L1 7205 7400 -73 5 873 917 193 20 45 chrX 37846347 37846548 -128803748 - Lx9 LINE L1 -453 7191 6996 5 873 542 222 146 0 chrX 37846559 37846602 -128803694 + Lx9 LINE L1 7428 7480 -164 5 873 583 65 21 0 chrX 37846602 37846695 -128803601 + (TAGA)n Simple_repeat Simple_repeat 4 98 0 5 873 542 222 146 0 chrX 37846695 37846836 -128803460 + Lx9 LINE L1 7481 7638 -6 5 873 261 250 0 0 chrX 37846862 37846910 -128803386 + BC1_Mm scRNA scRNA 12 59 -93 5 873 345 171 123 9 chrX 37847785 37847891 -128802405 - Lx5 LINE L1 -2 7048 6931 5 873 389 368 92 62 chrX 37847928 37848383 -128801913 - L1MCb LINE L1 -5553 492 24 5 873 318 356 32 25 chrX 37850888 37851165 -128799131 + L1MCa LINE L1 283 561 -5947 5 873 2060 161 6 3 chrX 37851379 37851716 -128798580 - ORR1A1 LTR MaLR -8 338 1 5 873 431 248 248 0 chrX 37851773 37851902 -128798394 - Lx7 LINE L1 -1061 6635 6475 5 873 249 191 0 0 chrX 37851915 37851962 -128798334 - Lx7 LINE L1 -1298 6398 6352 5 873 1525 169 30 40 chrX 37851964 37852359 -128797937 + RMER17C LTR ERVK 20 410 0 5 873 789 162 28 0 chrX 37852359 37852501 -128797795 - Lx5 LINE L1 -1228 5822 5677 5 873 335 308 101 13 chrX 37852503 37852740 -128797556 - L1MCa LINE L1 -3512 2809 2552 5 873 323 291 64 0 chrX 37852922 37853032 -128797264 - L1MCa LINE L1 -5125 1383 1267 5 873 965 295 56 17 chrX 37853298 37853657 -128796639 + L1_Mur3 LINE L1 473 845 -6867 5 873 1085 155 5 217 chrX 37853727 37854114 -128796182 - RLTR23 LTR ERV1 -125 305 1 5 873 426 323 32 9 chrX 37854114 37854326 -128795970 - Lx5 LINE L1 -209 5671 5429 5 873 629 65 37 9 chrX 37854326 37854434 -128795862 + (TTTC)n Simple_repeat Simple_repeat 3 113 0 5 873 514 271 12 37 chrX 37854453 37854466 -128795830 - Lx5 LINE L1 -417 5430 5418 5 873 483 175 237 0 chrX 37854466 37854580 -128795716 - B1_Mur4 SINE Alu -7 143 3 5 873 514 271 12 37 chrX 37854580 37854727 -128795569 - Lx5 LINE L1 -430 5417 5274 5 873 653 262 225 24 chrX 37854728 37855017 -128795279 - ORR1D2 LTR MaLR 0 374 28 5 873 506 242 65 0 chrX 37855021 37855145 -128795151 - ORR1D2-int LTR MaLR 0 1370 1239 5 873 2831 289 51 17 chrX 37855169 37856006 -128794290 + ORR1D-int LTR MaLR 241 1106 -264 5 873 480 290 119 18 chrX 37856025 37856243 -128794053 + Lx8 LINE L1 6735 6974 -499 5 873 25 0 0 0 chrX 37857522 37857547 -128792749 + AT_rich Low_complexity Low_complexity 1 25 0 5 873 29757 89 3 11 chrX 37859111 37863445 -128786851 + L1Md_F2 LINE L1 1291 5586 -297 5 873 7265 90 0 5 chrX 37863445 37864433 -128785863 + L1Md_F2 LINE L1 5587 6569 -13 5 873 23 68 0 0 chrX 37864907 37864951 -128785345 + AT_rich Low_complexity Low_complexity 1 44 0 5 873 1068 308 70 24 chrX 37865214 37865760 -128784536 + Lx9 LINE L1 7067 7637 -7 5 873 352 351 0 22 chrX 37865828 37865965 -128784331 - Lx8 LINE L1 -322 7151 7018 5 873 227 180 20 0 chrX 37865981 37866031 -128784265 + L1_Mur3 LINE L1 5301 5351 -529 5 873 3878 135 69 8 chrX 37866051 37867173 -128783123 + L1Md_F LINE L1 184 1811 -4072 5 873 21 82 0 0 chrX 37867481 37867530 -128782766 + AT_rich Low_complexity Low_complexity 1 49 0 5 873 387 0 0 0 chrX 37868014 37868057 -128782239 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 873 1603 110 16 21 chrX 37868567 37868809 -128781487 + L1_Mus2 LINE L1 6325 6565 -1 5 873 1515 71 99 0 chrX 37868911 37869123 -128781173 - L1_Mus3 LINE L1 -798 5840 5608 5 873 5724 86 18 1 chrX 37869123 37869912 -128780384 + L1_Mus3 LINE L1 5837 6638 0 5 873 25 90 0 0 chrX 37870348 37870415 -128779881 + AT_rich Low_complexity Low_complexity 1 67 0 5 873 23 33 0 0 chrX 37870446 37870476 -128779820 + AT_rich Low_complexity Low_complexity 1 30 0 5 873 294 309 87 31 chrX 37870747 37870874 -128779422 - MER20B DNA MER1_type -617 166 33 5 873 21 36 0 0 chrX 37871220 37871248 -128779048 + AT_rich Low_complexity Low_complexity 1 28 0 5 873 26 0 0 0 chrX 37874015 37874041 -128776255 + AT_rich Low_complexity Low_complexity 1 26 0 5 873 2320 236 12 6 chrX 37874041 37874528 -128775768 + Lx5 LINE L1 6154 6643 -407 5 873 3290 90 4 0 chrX 37874526 37874981 -128775315 - L1_Mus2 LINE L1 -383 6183 5727 5 873 2569 86 0 50 chrX 37874981 37875359 -128774937 + L1_Mus2 LINE L1 6208 6566 0 5 873 1841 264 25 0 chrX 37875374 37875776 -128774520 + Lx5 LINE L1 6634 7045 -5 5 873 22 0 0 0 chrX 37875987 37876009 -128774287 + AT_rich Low_complexity Low_complexity 1 22 0 5 873 4782 139 18 89 chrX 37877679 37879324 -128770972 + Lx2 LINE L1 527 2065 -3812 5 873 414 0 0 0 chrX 37879324 37879370 -128770926 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 873 4132 136 14 144 chrX 37879370 37879483 -128770813 + Lx2 LINE L1 2066 2154 -3723 5 109 3796 141 57 47 chrX 37879476 37880393 -128769903 + L1VL4 LINE L1 186 1113 -2446 5 874 7900 180 28 13 chrX 37880389 37882488 -128767808 + Lx2 LINE L1 4238 6378 -619 5 874 9612 24 0 0 chrX 37882481 37883598 -128766698 + L1Md_T LINE L1 4469 5585 -298 5 874 8486 31 0 0 chrX 37883599 37884629 -128765667 + L1Md_T LINE L1 5587 6582 0 5 874 19364 148 16 63 chrX 37884639 37886410 -128763886 + Lx4A LINE L1 2140 3883 -1994 5 874 2470 163 15 11 chrX 37886410 37886864 -128763432 + Lx2B LINE L1 6545 7000 0 5 874 19364 148 16 63 chrX 37886864 37887451 -128762845 + Lx4A LINE L1 3884 4459 -1417 5 874 902 94 107 7 chrX 37887451 37887591 -128762705 + B2_Mm2 SINE B2 1 154 -41 5 874 324 48 0 0 chrX 37887592 37887634 -128762662 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 5 874 19364 150 14 42 chrX 37887634 37889767 -128760529 + Lx4A LINE L1 4461 6607 -451 5 874 490 162 29 0 chrX 37889780 37889885 -128760411 - Lx3C LINE L1 -2 6974 6867 5 874 2242 171 38 5 chrX 37889898 37890297 -128759999 + Lx4A LINE L1 6645 7056 -2 5 874 22 56 0 0 chrX 37891500 37891536 -128758760 + AT_rich Low_complexity Low_complexity 1 36 0 5 874 384 360 25 12 chrX 37891566 37891729 -128758567 + MTE2a LTR MaLR 7 171 -248 5 874 269 337 114 18 chrX 37891760 37891926 -128758370 + B3A SINE B2 2 183 -15 5 874 387 0 0 0 chrX 37891944 37891987 -128758309 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 874 420 20 0 0 chrX 37892071 37892120 -128758176 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 874 608 272 34 23 chrX 37892232 37892409 -128757887 + MTE2a LTR MaLR 194 372 -7 5 874 391 352 31 10 chrX 37892462 37892657 -128757639 + MER20B DNA MER1_type 436 634 -149 5 874 15537 113 2 6 chrX 37892657 37895790 -128754506 - L1_Mus1 LINE L1 -4 6563 3446 5 874 8376 28 0 1 chrX 37895790 37897179 -128753117 - L1Md_T LINE L1 0 6582 5195 5 874 459 19 0 0 chrX 37897178 37897230 -128753066 + L1Md_T LINE L1 5089 5140 -743 5 874 14462 130 15 23 chrX 37897226 37900387 -128749909 - L1_Mus1 LINE L1 -2422 3461 327 5 874 183 241 66 49 chrX 37900500 37900561 -128749735 - L2 LINE L2 -586 2833 2772 5 874 17469 204 50 63 chrX 37900795 37901577 -128748719 + Lx4B LINE L1 796 1620 -4266 5 874 391 240 9 80 chrX 37901577 37901690 -128748606 + MT2B LTR ERVL 154 258 -343 5 874 899 138 0 0 chrX 37901596 37901734 -128748562 + B1_Mus1 SINE Alu 11 148 0 5 874 17469 204 50 63 chrX 37901734 37902140 -128748156 + Lx4B LINE L1 1621 2050 -3836 5 874 288 0 0 0 chrX 37902140 37902172 -128748124 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 874 17469 202 42 82 chrX 37902172 37902957 -128747339 + Lx4B LINE L1 2051 2895 -2991 5 874 495 0 0 0 chrX 37902957 37903012 -128747284 + (TTAA)n Simple_repeat Simple_repeat 1 55 0 5 874 17469 202 42 82 chrX 37903012 37903411 -128746885 + Lx4B LINE L1 2896 3319 -2567 5 874 300 27 0 0 chrX 37903411 37903448 -128746848 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 5 874 17469 202 42 82 chrX 37903448 37904826 -128745470 + Lx4B LINE L1 3320 4543 -1343 5 874 8271 37 4 1 chrX 37904826 37905819 -128744477 + L1Md_F2 LINE L1 5587 6582 0 5 874 17469 205 41 61 chrX 37905819 37907671 -128742625 + Lx4B LINE L1 4544 6408 -650 5 874 400 405 13 7 chrX 37907858 37908007 -128742289 + RSINE1 SINE B4 12 161 -4 5 874 24 0 0 0 chrX 37908167 37908191 -128742105 + AT_rich Low_complexity Low_complexity 1 24 0 5 874 448 179 42 0 chrX 37908215 37908305 -128741991 + Lx4B LINE L1 6541 6637 -421 5 874 24 0 0 0 chrX 37908350 37908374 -128741922 + AT_rich Low_complexity Low_complexity 1 24 0 5 874 318 421 0 41 chrX 37908398 37908544 -128741752 - RSINE1 SINE B4 -23 142 3 5 874 218 364 9 0 chrX 37908573 37908668 -128741628 + PB1D10 SINE Alu 21 118 -31 5 874 1312 193 149 0 chrX 37908993 37909289 -128741007 + RMER6C LTR ERVK 1 340 -350 5 874 7273 88 2 52 chrX 37909289 37911015 -128739281 + L1_Mus1 LINE L1 4892 6567 0 6 874 258 95 0 0 chrX 37911085 37911127 -128739169 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 874 180 77 0 0 chrX 37911127 37911153 -128739143 + (GA)n Simple_repeat Simple_repeat 1 26 0 6 874 1025 206 162 62 chrX 37911153 37911636 -128738660 + RMER6C LTR ERVK 218 690 0 6 874 575 92 0 11 chrX 37912246 37912334 -128737962 + (TG)n Simple_repeat Simple_repeat 2 88 0 6 874 2209 176 9 21 chrX 37912807 37913231 -128737065 - MTC LTR MaLR -2 419 1 6 874 28 0 0 0 chrX 37913266 37913294 -128737002 + AT_rich Low_complexity Low_complexity 1 28 0 6 874 302 0 26 0 chrX 37913328 37913366 -128736930 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 6 874 255 31 0 0 chrX 37913555 37913587 -128736709 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 874 1022 245 71 68 chrX 37915025 37915305 -128734991 + MTD LTR MaLR 11 291 -128 6 874 1419 185 38 46 chrX 37915305 37915650 -128734646 + Lx2B LINE L1 6012 6353 -647 6 874 1395 152 108 31 chrX 37915643 37915929 -128734367 + Lx2B LINE L1 6651 6958 -39 6 874 1114 108 152 5 chrX 37915930 37916134 -128734162 + Lx3_Mus LINE L1 6776 7009 0 6 874 25 51 0 0 chrX 37916134 37916173 -128734123 + AT_rich Low_complexity Low_complexity 1 39 0 6 874 423 0 0 0 chrX 37916475 37916522 -128733774 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 874 233 298 35 53 chrX 37916591 37916761 -128733535 - L1M4c LINE L1 -3549 2833 2667 6 874 1005 310 25 47 chrX 37916771 37917177 -128733119 + Lx8 LINE L1 6796 7192 -281 6 874 268 314 35 0 chrX 37917305 37917391 -128732905 + MTE2b LTR MaLR 5 93 -286 6 874 337 260 94 104 chrX 37917475 37917677 -128732619 - L1M4c LINE L1 -4739 1645 1446 6 874 329 294 68 16 chrX 37917871 37918061 -128732235 - L1M4c LINE L1 -4733 1580 1381 6 874 30 0 0 0 chrX 37918183 37918213 -128732083 + AT_rich Low_complexity Low_complexity 1 30 0 6 874 22 56 0 0 chrX 37919069 37919105 -128731191 + AT_rich Low_complexity Low_complexity 1 36 0 6 874 869 191 14 77 chrX 37919621 37919838 -128730458 - Lx3B LINE L1 -6 6994 6790 6 874 189 74 0 0 chrX 37919854 37919881 -128730415 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 6 874 538 290 93 30 chrX 37922508 37922900 -128727396 - L1M4b LINE L1 -1966 5037 4617 6 874 24 32 0 0 chrX 37922908 37922939 -128727357 + AT_rich Low_complexity Low_complexity 1 31 0 6 874 257 403 14 43 chrX 37922941 37923081 -128727215 - ID_B1 SINE B4 -3 221 86 6 874 881 177 19 0 chrX 37923213 37923371 -128726925 + RMER6D LTR ERVK 1 161 -559 6 874 206 0 69 0 chrX 37923385 37923414 -128726882 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 6 874 2900 204 26 3 chrX 37923414 37924000 -128726296 - Lx4B LINE L1 -21 7037 6439 6 874 258 32 0 0 chrX 37924000 37924031 -128726265 + (CAA)n Simple_repeat Simple_repeat 3 33 0 6 874 6448 145 53 45 chrX 37924031 37925347 -128724949 + L1_Mur2 LINE L1 3482 4808 -1069 6 874 993 189 100 13 chrX 37925576 37925877 -128724419 + RMER6D LTR ERVK 140 466 -254 6 874 1669 237 57 19 chrX 37925868 37926346 -128723950 + RMER6D LTR ERVK 225 720 0 6 874 946 192 0 0 chrX 37926747 37926914 -128723382 - RMER6D LTR ERVK 0 720 554 6 874 2278 193 139 26 chrX 37926953 37927571 -128722725 - RMER6C LTR ERVK 0 690 3 6 874 943 242 35 4 chrX 37927598 37927830 -128722466 - Lx6 LINE L1 -15 7445 7207 6 874 8817 131 10 7 chrX 37927842 37929453 -128720843 - Lx2 LINE L1 0 6997 5381 6 874 477 330 93 29 chrX 37929455 37930033 -128720263 - L1M4b LINE L1 -2919 4084 3470 6 874 387 0 0 0 chrX 37930036 37930079 -128720217 + (TC)n Simple_repeat Simple_repeat 1 43 0 6 874 252 0 0 0 chrX 37930079 37930106 -128720190 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 874 566 179 9 9 chrX 37930313 37930420 -128719876 - B2_Mm1t SINE B2 -85 108 2 6 874 296 333 0 12 chrX 37930796 37930960 -128719336 + L1M2 LINE L1 2786 2947 -3196 6 874 3918 178 19 27 chrX 37931145 37931984 -128718312 - L1_Mur2 LINE L1 -1206 4671 3840 6 874 13176 81 30 8 chrX 37931977 37932836 -128717460 - L1_Mus2 LINE L1 0 6566 5684 6 874 6092 63 19 31 chrX 37932836 37933668 -128716628 + RLTR13B2 LTR ERVK 1 822 0 6 874 13176 126 23 98 chrX 37933668 37934324 -128715972 - L1_Mus2 LINE L1 -200 5683 5023 6 874 180 0 0 0 chrX 37934324 37934344 -128715952 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 874 13176 126 23 98 chrX 37934344 37936077 -128714219 - L1_Mus2 LINE L1 -861 5022 3492 6 874 291 83 0 40 chrX 37936077 37936127 -128714169 + L1_Mm LINE L1 4836 4883 -1000 6 874 5035 124 11 5 chrX 37936137 37936982 -128713314 - MusHAL1 LINE L1 -1862 850 1 6 874 3104 232 84 45 chrX 37936949 37938038 -128712258 - L1_Mus2 LINE L1 -5380 1236 105 6 874 1355 171 4 11 chrX 37938039 37938300 -128711996 - L1_Mur2 LINE L1 -2024 3853 3595 6 874 1595 142 78 0 chrX 37938298 37938593 -128711703 + L1_Mur2 LINE L1 2707 3024 -2853 6 874 1643 181 105 71 chrX 37938683 37939064 -128711232 + ORR1B1 LTR MaLR 1 394 0 6 874 512 297 35 94 chrX 37939267 37939553 -128710743 - L1M4b LINE L1 -6113 1221 953 6 874 2472 86 0 22 chrX 37941829 37942186 -128708110 + L1Md_F2 LINE L1 6234 6582 0 6 874 402 21 0 0 chrX 37942734 37942781 -128707515 + (T)n Simple_repeat Simple_repeat 1 47 0 6 874 34675 73 3 2 chrX 37942816 37949043 -128701253 - L1Md_F2 LINE L1 0 6582 347 6 874 482 295 24 8 chrX 37950365 37950488 -128699808 - B1F SINE Alu -8 141 17 6 874 265 265 89 89 chrX 37950392 37950504 -128699792 - MT2B2 LTR ERVL -315 269 158 6 874 23 54 0 0 chrX 37950920 37950957 -128699339 + AT_rich Low_complexity Low_complexity 1 37 0 6 874 201 94 0 0 chrX 37950957 37950989 -128699307 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 874 1025 317 95 17 chrX 37951294 37951509 -128698787 - Lx8 LINE L1 -978 6495 6260 6 874 1867 135 42 27 chrX 37951509 37951844 -128698452 - Lx LINE L1 -1 6653 6314 6 874 1025 317 95 17 chrX 37951844 37952145 -128698151 - Lx8 LINE L1 -1214 6259 5940 6 874 344 326 0 10 chrX 37952282 37952378 -128697918 + MTE2b LTR MaLR 72 166 -213 6 874 300 307 97 22 chrX 37952413 37952949 -128697347 - L1M4b LINE L1 -3181 3825 3250 6 874 249 302 41 16 chrX 37953018 37953139 -128697157 - L1M4b LINE L1 -4764 2244 2121 6 874 885 285 77 21 chrX 37953490 37953792 -128696504 - MTE2b LTR MaLR 0 374 58 6 874 22 0 0 0 chrX 37953909 37953931 -128696365 + AT_rich Low_complexity Low_complexity 1 22 0 6 874 310 290 105 75 chrX 37954035 37954274 -128696022 - L1M4b LINE L1 -5451 1883 1638 6 874 252 0 0 0 chrX 37954292 37954320 -128695976 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 874 404 321 31 31 chrX 37954322 37954483 -128695813 - RLTR14 LTR ERV1 -3 379 219 6 874 502 48 0 0 chrX 37954596 37954659 -128695637 - L1_Mus1 LINE L1 -909 5727 5665 6 874 6447 64 28 2 chrX 37954647 37955496 -128694800 + L1_Mus1 LINE L1 5697 6567 0 6 874 21 36 0 0 chrX 37955517 37955545 -128694751 + AT_rich Low_complexity Low_complexity 1 28 0 6 874 7381 34 0 5 chrX 37956307 37957190 -128693106 + L1Md_T LINE L1 5704 6582 0 6 874 383 306 81 0 chrX 37957995 37958119 -128692177 - MTEa LTR MaLR -12 367 234 6 874 2178 216 91 30 chrX 37958221 37958760 -128691536 - Lx5 LINE L1 0 7050 6479 6 874 1071 153 0 0 chrX 37958759 37958929 -128691367 - Lx4B LINE L1 -1182 5876 5707 6 874 579 110 9 35 chrX 37959197 37959310 -128690986 + (CATATA)n Simple_repeat Simple_repeat 4 113 0 6 874 512 231 17 8 chrX 37959645 37959763 -128690533 - Lx5 LINE L1 -392 6658 6540 6 874 277 296 23 0 chrX 37960018 37960106 -128690190 + MER20B DNA MER1_type 297 386 -397 6 874 472 278 115 35 chrX 37960126 37960439 -128689857 + MER20B DNA MER1_type 437 774 -9 6 874 23 33 0 0 chrX 37960439 37960469 -128689827 + AT_rich Low_complexity Low_complexity 1 30 0 6 874 4691 45 17 0 chrX 37960484 37961063 -128689233 + L1Md_F2 LINE L1 5992 6580 -2 6 874 562 233 80 23 chrX 37961317 37961493 -128688803 + RMER1B Other Other 881 1066 0 6 874 279 231 0 0 chrX 37961730 37961782 -128688514 - Lx8 LINE L1 -1084 6389 6338 6 874 496 181 11 0 chrX 37962206 37962300 -128687996 - Lx3A LINE L1 -280 5597 5503 6 874 662 190 9 0 chrX 37962280 37962396 -128687900 + Lx3A LINE L1 5628 5744 -1237 6 874 935 264 79 13 chrX 37962393 37962708 -128687588 + Lx4B LINE L1 6723 7058 0 6 874 335 323 136 6 chrX 37962977 37963329 -128686967 + Charlie1a DNA MER1_type 1053 1450 -5 6 874 1318 147 81 4 chrX 37963392 37963526 -128686770 + Lx2 LINE L1 6729 6866 -131 6 874 180 0 0 0 chrX 37963526 37963546 -128686750 + (TGGG)n Simple_repeat Simple_repeat 2 21 0 6 874 1318 147 81 4 chrX 37963546 37963657 -128686639 + Lx2 LINE L1 6867 6992 -5 6 874 1667 153 104 6 chrX 37963698 37964033 -128686263 - L1_Mur2 LINE L1 -1256 4621 4254 6 874 428 86 0 14 chrX 37964060 37964131 -128686165 + (TAAA)n Simple_repeat Simple_repeat 4 73 0 6 874 1148 289 33 22 chrX 37964209 37964570 -128685726 - MLT1B LTR MaLR -21 369 5 6 874 25 31 0 0 chrX 37964995 37965027 -128685269 + AT_rich Low_complexity Low_complexity 1 32 0 6 874 24 32 0 0 chrX 37965429 37965460 -128684836 + AT_rich Low_complexity Low_complexity 1 31 0 6 874 23 0 0 0 chrX 37965887 37965910 -128684386 + AT_rich Low_complexity Low_complexity 1 23 0 6 874 5605 76 0 4 chrX 37965928 37966668 -128683628 - L1_Mus1 LINE L1 0 6567 5831 6 874 277 412 86 23 chrX 37966867 37967111 -128683185 + L2a LINE L2 2713 2973 -446 6 874 216 0 0 0 chrX 37967111 37967135 -128683161 + (TC)n Simple_repeat Simple_repeat 2 25 0 6 874 277 337 94 35 chrX 37967135 37967285 -128683011 + L2a LINE L2 2974 3140 -286 6 874 3539 81 5 28 chrX 37967416 37968007 -128682289 + L1MEf LINE L1 1398 2263 -3620 6 874 214 244 11 34 chrX 37969171 37969260 -128681036 + T-rich Low_complexity Low_complexity 2 88 0 6 874 529 92 0 0 chrX 37970097 37970173 -128680123 + L1_Mus2 LINE L1 6432 6507 -59 6 874 27 0 0 0 chrX 37970493 37970520 -128679776 + AT_rich Low_complexity Low_complexity 1 27 0 6 874 388 346 46 46 chrX 37970754 37970972 -128679324 - MLT1J LTR MaLR -231 281 28 6 874 6375 183 68 14 chrX 37971171 37972504 -128677792 + Lx4B LINE L1 5653 7056 -2 6 874 414 248 68 34 chrX 37972510 37972627 -128677669 + B1_Mur1 SINE Alu 18 138 -11 6 874 297 0 0 0 chrX 37972628 37972661 -128677635 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 874 1146 257 9 12 chrX 37973999 37974330 -128675966 - L1_Mur3 LINE L1 -6606 1106 777 6 874 7693 58 10 10 chrX 37974321 37975304 -128674992 - L1Md_F2 LINE L1 -3 6579 5597 6 874 1437 84 0 0 chrX 37975302 37975493 -128674803 + L1_Mm LINE L1 5075 5265 -618 6 874 2946 128 61 0 chrX 37975637 37976099 -128674197 - Lx LINE L1 0 6654 6165 6 874 308 352 52 32 chrX 37976119 37976479 -128673817 - L1_Mur3 LINE L1 -7407 305 23 6 874 285 150 62 0 chrX 37976573 37976653 -128673643 - L1MB3 LINE L1 -2 6181 6097 7 874 772 288 71 62 chrX 37976659 37976912 -128673384 - L1M2 LINE L1 -573 5718 5463 7 874 192 40 0 0 chrX 37976912 37976937 -128673359 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 874 984 267 98 44 chrX 37976937 37977670 -128672626 - L1M2 LINE L1 -829 5462 4678 7 874 450 289 99 16 chrX 37977671 37977976 -128672320 - L1M2 LINE L1 -1918 4222 3884 7 874 395 250 80 44 chrX 37978444 37978695 -128671601 + L1MA7 LINE L1 6020 6279 -12 7 874 1049 289 96 9 chrX 37978721 37979056 -128671240 + MTD LTR MaLR 42 405 -14 7 874 965 236 7 125 chrX 37979080 37979376 -128670920 + Lx5 LINE L1 5342 5603 -277 7 874 1763 175 23 44 chrX 37979372 37979761 -128670535 + L1_Mur2 LINE L1 4611 4991 -886 7 874 1584 209 7 3 chrX 37979761 37980058 -128670238 + Lx5 LINE L1 6323 6620 -430 7 874 648 142 0 15 chrX 37980055 37980181 -128670115 + Lx5 LINE L1 5646 5795 -369 7 874 30 0 0 0 chrX 37980196 37980226 -128670070 + AT_rich Low_complexity Low_complexity 1 30 0 7 874 14815 196 103 27 chrX 37980232 37981375 -128668921 + L1_Mus4 LINE L1 492 1664 -4213 7 874 438 36 0 0 chrX 37981375 37981431 -128668865 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 874 14815 188 186 27 chrX 37981431 37981559 -128668737 + L1_Mus4 LINE L1 1665 1792 -4085 7 874 5505 80 12 4 chrX 37981559 37982323 -128667973 + L1Md_F2 LINE L1 5800 6569 -13 7 874 531 0 0 0 chrX 37982324 37982383 -128667913 + (TA)n Simple_repeat Simple_repeat 2 60 0 7 874 14815 188 186 27 chrX 37982383 37982579 -128667717 + L1_Mus4 LINE L1 1793 2008 -3869 7 874 1034 88 0 0 chrX 37982579 37982715 -128667581 + B1_Mus2 SINE Alu 2 137 -10 7 874 14815 177 155 26 chrX 37982715 37986250 -128664046 + L1_Mus4 LINE L1 2009 6164 -472 7 874 372 113 40 20 chrX 37986252 37986351 -128663945 + L1_Mus4 LINE L1 6536 6636 0 7 874 414 191 54 62 chrX 37986360 37986472 -128663824 + RMER6-int LTR ERVK 359 469 -2708 7 874 323 198 99 0 chrX 37986457 37986558 -128663738 + RMER6-int LTR ERVK 408 518 -2659 7 874 336 167 0 0 chrX 37986617 37986689 -128663607 + RMER6-int LTR ERVK 503 574 -2603 7 874 39709 22 6 6 chrX 37986691 37993276 -128657020 - L1Md_A LINE L1 0 6582 3 7 874 404 134 15 0 chrX 37993277 37993344 -128656952 + RMER6-int LTR ERVK 567 634 -2543 7 874 2276 167 146 42 chrX 37993392 37993960 -128656336 + RMER6-int LTR ERVK 2550 3176 -1 7 874 2593 189 102 39 chrX 37993961 37994610 -128655686 + RMER6C LTR ERVK 1 690 0 7 874 2192 265 28 11 chrX 37994779 37995421 -128654875 + Lx9 LINE L1 6675 7327 -317 7 874 2729 283 60 8 chrX 37995420 37996225 -128654071 + Lx6 LINE L1 6600 7446 -14 7 874 291 272 56 0 chrX 37996244 37996369 -128653927 + L1MA5 LINE L1 6164 6295 -5 7 874 228 318 45 17 chrX 37996409 37996585 -128653711 - L1MC LINE L1 -1481 4665 4485 7 874 235 279 5 67 chrX 37997164 37997276 -128653020 + PB1 SINE Alu 24 120 -7 7 874 465 19 0 0 chrX 37997741 37997795 -128652501 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 874 348 88 0 0 chrX 37998275 37998332 -128651964 + (CA)n Simple_repeat Simple_repeat 2 58 0 7 874 383 92 15 0 chrX 37998332 37998396 -128651900 + (TA)n Simple_repeat Simple_repeat 2 67 0 7 874 471 316 75 30 chrX 37998624 37998823 -128651473 - MIR SINE MIR -26 236 29 7 874 21 0 0 0 chrX 37998866 37998887 -128651409 + AT_rich Low_complexity Low_complexity 1 21 0 7 874 1096 130 0 75 chrX 37998955 37999154 -128651142 - B2_Mm2 SINE B2 -10 185 2 7 874 278 329 18 108 chrX 37999601 37999768 -128650528 - B4A SINE B4 -136 156 5 7 874 1423 199 88 22 chrX 38000064 38000382 -128649914 - Lx3C LINE L1 -48 6928 6590 1 874 580 319 5 54 chrX 38000384 38000669 -128649627 + MTEb LTR MaLR 108 365 -14 2 874 594 179 128 32 chrX 38000840 38000996 -128649300 - Lx4A LINE L1 -2 7056 6886 3 874 713 207 21 38 chrX 38000996 38001182 -128649114 + L1_Mur3 LINE L1 4140 4322 -1558 4 874 401 284 29 51 chrX 38001953 38002100 -128648196 - MLT1A1 LTR MaLR -41 367 179 5 874 22 0 0 0 chrX 38002584 38002606 -128647690 + AT_rich Low_complexity Low_complexity 1 22 0 6 874 278 369 16 8 chrX 38002739 38002862 -128647434 + MER5B DNA MER1_type 8 131 -47 7 874 7227 114 4 5 chrX 38002862 38004060 -128646236 - L1_Mus4 LINE L1 -13 6623 5429 8 874 9056 139 44 4 chrX 38004062 38006175 -128644121 - L1VL4 LINE L1 -1109 2450 254 9 874 2040 186 5 11 chrX 38006197 38006571 -128643725 - RMER6-int LTR ERVK -2805 372 1 1 874 1419 161 115 15 chrX 38006571 38006877 -128643419 - RMER6C LTR ERVK -407 283 1 1 874 625 320 11 43 chrX 38006877 38007063 -128643233 + B3 SINE B2 37 216 0 1 874 1866 250 61 21 chrX 38007295 38007899 -128642397 - Lx6 LINE L1 -19 7441 6456 1 874 252 0 0 0 chrX 38007918 38007946 -128642350 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 874 2159 208 84 4 chrX 38007946 38008164 -128642132 - RMER1B Other Other -33 1033 787 1 874 2824 55 0 14 chrX 38008164 38008534 -128641762 - L1Md_F3 LINE L1 -1 6583 6219 1 874 2159 208 84 4 chrX 38008534 38008765 -128641531 - RMER1B Other Other -280 786 550 1 874 187 92 31 94 chrX 38008773 38008869 -128641427 + T-rich Low_complexity Low_complexity 4 93 0 1 874 252 0 0 0 chrX 38008888 38008916 -128641380 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 874 22 56 0 0 chrX 38009394 38009430 -128640866 + AT_rich Low_complexity Low_complexity 1 36 0 1 874 840 20 0 0 chrX 38010759 38010857 -128639439 + (GAAA)n Simple_repeat Simple_repeat 3 100 0 1 875 602 146 8 0 chrX 38011030 38011216 -128639080 + L1_Mus4 LINE L1 6513 6636 0 2 875 948 328 46 58 chrX 38011238 38011756 -128638540 - Lx8 LINE L1 -379 7094 6583 2 875 3236 246 45 55 chrX 38011883 38012823 -128637473 + Lx9 LINE L1 6512 7441 -203 2 875 9771 53 2 0 chrX 38012879 38014134 -128636162 - L1_Mm LINE L1 -1782 4101 2845 2 875 3553 43 0 0 chrX 38014133 38014576 -128635720 + L1_Mm LINE L1 4086 4528 -1355 2 875 828 149 0 0 chrX 38015423 38015564 -128634732 + (CA)n Simple_repeat Simple_repeat 2 142 0 2 875 201 147 0 0 chrX 38015563 38015597 -128634699 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 2 875 1249 276 86 44 chrX 38016186 38016237 -128634059 + Lx9 LINE L1 5157 5215 -632 2 875 429 54 0 0 chrX 38016237 38016293 -128634003 + (CAA)n Simple_repeat Simple_repeat 2 57 0 2 875 1249 277 83 42 chrX 38016293 38016963 -128633333 + Lx9 LINE L1 5216 5941 -1703 2 875 263 357 89 0 chrX 38016975 38017087 -128633209 - ORR1E LTR MaLR -235 124 3 2 875 536 301 102 85 chrX 38017087 38017509 -128632787 + L1MA10 LINE L1 5903 6331 -3 2 875 285 238 97 36 chrX 38017489 38017685 -128632611 + L1M3 LINE L1 4276 4483 -1657 3 875 381 348 21 28 chrX 38017694 38017839 -128632457 + B1F SINE Alu 3 146 -3 3 875 870 306 99 50 chrX 38017867 38018342 -128631954 - MER34A1 LTR ERV1 -89 498 1 3 875 1554 42 23 27 chrX 38018394 38018613 -128631683 - L1Md_F3 LINE L1 0 6584 6367 3 875 6640 72 0 25 chrX 38018931 38019822 -128630474 + L1_Mus2 LINE L1 5698 6566 0 3 875 405 0 0 0 chrX 38019848 38019893 -128630403 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 875 1503 336 32 19 chrX 38019893 38020509 -128629787 - Lx8 LINE L1 -298 7175 6552 3 875 355 223 374 0 chrX 38020511 38020650 -128629646 - Lx8 LINE L1 -1069 6404 6214 3 875 1213 309 53 23 chrX 38020928 38021672 -128628624 - Lx8 LINE L1 -1396 6077 5298 3 875 2419 262 66 50 chrX 38021751 38022582 -128627714 - Lx6 LINE L1 -846 6614 5771 3 875 5202 69 0 0 chrX 38022581 38023264 -128627032 + L1_Mm LINE L1 4005 4687 -1196 3 875 2079 200 40 7 chrX 38023260 38023712 -128626584 - Lx6 LINE L1 -109 5771 5305 3 875 1137 239 8 0 chrX 38023707 38023967 -128626329 - Lx6 LINE L1 -699 5178 4917 3 875 937 168 22 6 chrX 38023968 38024162 -128626134 - RMER6C LTR ERVK -62 628 433 3 875 1511 120 4 4 chrX 38024162 38024396 -128625900 - Lx2B LINE L1 -994 6006 5773 4 875 1400 120 43 4 chrX 38024411 38024645 -128625651 - Lx LINE L1 -15 6639 6397 4 875 752 159 14 7 chrX 38024645 38024777 -128625519 - Lx2B LINE L1 -438 5439 5306 4 875 527 292 54 27 chrX 38024763 38025023 -128625273 - L1M2 LINE L1 -2405 3738 3472 4 875 188 326 23 23 chrX 38025880 38025968 -128624328 - MIR SINE MIR -122 140 53 4 875 1104 94 0 0 chrX 38025993 38026152 -128624144 + L1_Mus2 LINE L1 6407 6565 -1 4 875 25 83 0 0 chrX 38026234 38026294 -128624002 + AT_rich Low_complexity Low_complexity 1 60 0 4 875 332 197 71 64 chrX 38026525 38026666 -128623630 + Lx9 LINE L1 7501 7642 -2 4 875 782 285 39 8 chrX 38027081 38027339 -128622957 - Lx8 LINE L1 -909 6564 6299 4 875 21 0 0 0 chrX 38027341 38027362 -128622934 + AT_rich Low_complexity Low_complexity 1 21 0 4 875 339 273 25 95 chrX 38027379 38027537 -128622759 - Lx8 LINE L1 -360 5520 5374 4 875 1234 350 48 44 chrX 38027524 38028120 -128622176 + Lx8 LINE L1 6536 7138 -335 4 875 1769 216 10 29 chrX 38028120 38028530 -128621766 + MTB_Mm LTR MaLR 2 403 -4 5 875 1234 350 48 44 chrX 38028530 38028687 -128621609 + Lx8 LINE L1 7139 7292 -181 4 875 2293 197 35 16 chrX 38028794 38029310 -128620986 - RLTR11A2 LTR ERVK -1 526 1 5 875 21 0 0 0 chrX 38030335 38030356 -128619940 + AT_rich Low_complexity Low_complexity 1 21 0 5 875 24 53 0 0 chrX 38030720 38030758 -128619538 + AT_rich Low_complexity Low_complexity 1 38 0 5 875 307 315 38 38 chrX 38033049 38033181 -128617115 - B1F SINE Alu 0 149 18 5 875 434 285 103 15 chrX 38033508 38033946 -128616350 - L1M4c LINE L1 -3755 2624 2142 5 875 2230 309 66 36 chrX 38034217 38035173 -128615123 - Lx9 LINE L1 -180 7464 6480 5 875 2826 117 10 2 chrX 38035431 38035835 -128614461 - MTB_Mm LTR MaLR 0 407 1 5 875 513 340 46 5 chrX 38036173 38036368 -128613928 - Lx8 LINE L1 -154 7319 7117 5 875 537 367 5 53 chrX 38038155 38038362 -128611934 - B4A SINE B4 -6 286 90 5 875 31135 100 23 8 chrX 38038737 38041334 -128608962 + L1Md_F2 LINE L1 366 3004 -2879 6 875 281 26 26 0 chrX 38041334 38041372 -128608924 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 875 31135 88 3 2 chrX 38041372 38043951 -128606345 + L1Md_F2 LINE L1 3005 5585 -298 6 875 7186 85 14 3 chrX 38043952 38044923 -128605373 + L1Md_F2 LINE L1 5587 6568 -14 6 875 261 139 0 0 chrX 38045358 38045401 -128604895 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 875 273 98 0 0 chrX 38045420 38045461 -128604835 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 875 1385 168 11 46 chrX 38045477 38045739 -128604557 - ORR1B2 LTR MaLR -114 253 1 6 875 3356 114 8 14 chrX 38045923 38046440 -128603856 + Lx LINE L1 6141 6654 0 6 875 1034 274 18 43 chrX 38046472 38046800 -128603496 + Lx9 LINE L1 6815 7134 -510 6 875 3333 212 26 18 chrX 38046806 38047413 -128602883 + Lx5 LINE L1 6381 6979 -71 6 875 3000 49 2 68 chrX 38047413 38047828 -128602468 + RLTR10 LTR ERVK 1 388 -2 6 875 3333 212 26 18 chrX 38047828 38047882 -128602414 + Lx5 LINE L1 6980 7046 -4 6 875 342 298 168 33 chrX 38048157 38048490 -128601806 - Lx9 LINE L1 -47 7597 7220 6 875 241 311 75 0 chrX 38048490 38048596 -128601700 + RLTR13D3 LTR ERVK 846 959 -155 7 875 1852 177 61 3 chrX 38048937 38049299 -128600997 + ORR1B1 LTR MaLR 10 392 -2 7 875 282 304 31 6 chrX 38049476 38049635 -128600661 + L1MC4a LINE L1 5871 6033 -1849 7 875 23 0 0 0 chrX 38049744 38049767 -128600529 + AT_rich Low_complexity Low_complexity 1 23 0 7 875 266 0 0 29 chrX 38050450 38050485 -128599811 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 7 875 2886 169 21 23 chrX 38050503 38051039 -128599257 - Lx4B LINE L1 -37 7021 6501 7 875 406 375 77 30 chrX 38051338 38051701 -128598595 + MLT1J LTR MaLR 98 477 -35 7 875 489 278 170 0 chrX 38052571 38052783 -128597513 - Lx8 LINE L1 -2 7471 7224 7 875 23 0 0 0 chrX 38054917 38054940 -128595356 + AT_rich Low_complexity Low_complexity 1 23 0 7 875 782 268 41 15 chrX 38054994 38055191 -128595105 - B3 SINE B2 0 216 15 7 875 228 208 0 0 chrX 38055198 38055246 -128595050 + Lx8 LINE L1 6722 6769 -704 8 875 226 285 72 99 chrX 38055259 38055411 -128594885 - B2_Mm2 SINE B2 -7 188 41 8 875 2339 316 16 14 chrX 38055475 38056272 -128594024 + Lx8 LINE L1 6326 7124 -349 8 875 699 266 122 4 chrX 38056309 38056554 -128593742 + Lx8 LINE L1 7200 7473 0 8 875 932 62 8 8 chrX 38056612 38056742 -128593554 + B1_Mus2 SINE Alu 12 141 -6 8 875 617 13 0 25 chrX 38056744 38056823 -128593473 + (GAAA)n Simple_repeat Simple_repeat 2 78 0 8 875 1282 133 0 0 chrX 38056863 38057058 -128593238 - B2_Mm2 SINE B2 0 195 1 8 875 22 0 0 0 chrX 38057224 38057246 -128593050 + AT_rich Low_complexity Low_complexity 1 22 0 8 875 432 175 0 0 chrX 38057903 38058000 -128592296 + (TG)n Simple_repeat Simple_repeat 2 98 0 8 875 189 306 32 96 chrX 38059459 38059553 -128590743 - L3 LINE CR1 -11 4478 4391 8 875 217 27 81 0 chrX 38060056 38060093 -128590203 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 8 875 769 248 79 69 chrX 38060093 38060121 -128590175 - Lx6 LINE L1 -19 7441 7415 9 875 3730 81 72 13 chrX 38060121 38060650 -128589646 - LTRIS2 LTR ERV1 0 564 5 9 875 769 248 79 69 chrX 38060650 38060924 -128589372 - Lx6 LINE L1 -46 7414 7136 9 875 3380 214 53 9 chrX 38060926 38061698 -128588598 + Lx2B LINE L1 6109 6914 -86 9 875 1731 192 28 34 chrX 38061745 38062151 -128588145 - RLTR9B2 LTR ERVK 0 437 1 9 875 941 352 50 8 chrX 38062494 38062858 -128587438 - MTE2b LTR MaLR 0 379 1 9 875 606 273 131 8 chrX 38062866 38063152 -128587144 - MTE2b-int LTR MaLR -8 1572 1075 9 875 867 305 83 99 chrX 38063152 38063368 -128586928 - MTE2b LTR MaLR 0 379 167 9 875 776 275 6 6 chrX 38063368 38063547 -128586749 - B3A SINE B2 -16 182 4 9 875 867 305 83 99 chrX 38063547 38063715 -128586581 - MTE2b LTR MaLR -213 166 1 9 875 1335 342 22 24 chrX 38063715 38064209 -128586087 - MTE2b-int LTR MaLR -340 1240 748 9 875 931 307 43 6 chrX 38064235 38064704 -128585592 - L1M2 LINE L1 -1047 5096 4611 9 875 7994 30 0 0 chrX 38064847 38065789 -128584507 - L1Md_T LINE L1 0 6582 5641 9 875 475 286 83 25 chrX 38066058 38066262 -128584034 + L1_Rod LINE L1 981 1196 -6412 9 875 1177 221 21 116 chrX 38066292 38066819 -128583477 + L1_Rod LINE L1 1256 1732 -4115 9 875 797 314 4 26 chrX 38066835 38067103 -128583193 - Lx9 LINE L1 -662 6982 6721 1 875 1541 162 77 25 chrX 38067733 38068156 -128582140 + RMER17C LTR ERVK 21 441 -517 1 875 510 98 0 0 chrX 38069483 38069565 -128580731 + (TG)n Simple_repeat Simple_repeat 1 82 0 1 875 412 309 29 0 chrX 38070428 38070632 -128579664 + L1MA9 LINE L1 6093 6302 -10 1 875 399 41 0 0 chrX 38070755 38070804 -128579492 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 875 1073 363 55 150 chrX 38071164 38072151 -128578145 - MTEa-int LTR MaLR -89 1491 609 1 875 534 11 61 40 chrX 38072151 38072250 -128578046 + (TTATA)n Simple_repeat Simple_repeat 2 102 0 1 875 1073 363 55 150 chrX 38072250 38072893 -128577403 - MTEa-int LTR MaLR -972 608 15 1 875 614 342 76 49 chrX 38072903 38073272 -128577024 - MTEa LTR MaLR 0 379 1 1 875 21 57 0 0 chrX 38073449 38073484 -128576812 + AT_rich Low_complexity Low_complexity 1 35 0 1 875 4756 101 6 29 chrX 38073617 38074331 -128575965 + L1_Mus2 LINE L1 5870 6566 0 1 875 204 361 48 16 chrX 38074429 38074553 -128575743 + L2c LINE L2 3256 3383 -4 1 875 226 393 108 11 chrX 38074568 38074753 -128575543 - MIR SINE MIR -30 232 30 1 875 243 0 0 0 chrX 38074887 38074914 -128575382 + (CAAA)n Simple_repeat Simple_repeat 4 30 0 1 875 205 51 25 25 chrX 38075551 38075591 -128574705 + (TTTTTG)n Simple_repeat Simple_repeat 6 45 0 1 875 342 71 42 14 chrX 38075633 38075704 -128574592 + (TAGA)n Simple_repeat Simple_repeat 1 73 0 1 875 256 250 14 14 chrX 38076492 38076561 -128573735 + GA-rich Low_complexity Low_complexity 4 72 0 1 875 254 106 21 0 chrX 38076564 38076611 -128573685 + (GGAA)n Simple_repeat Simple_repeat 2 49 0 1 875 1149 279 17 31 chrX 38076930 38077288 -128573008 + Lx6 LINE L1 7078 7430 -30 1 875 225 0 0 0 chrX 38077433 38077458 -128572838 + (T)n Simple_repeat Simple_repeat 1 25 0 1 875 514 287 23 8 chrX 38078065 38078195 -128572101 - MT2A LTR ERVL -401 132 1 1 875 452 299 123 37 chrX 38078537 38079002 -128571294 + L1MD LINE L1 3796 4300 -1846 1 875 283 235 14 90 chrX 38079052 38079197 -128571099 + Lx9 LINE L1 7510 7643 -1 1 875 592 377 9 5 chrX 38079349 38079570 -128570726 + ID_B1 SINE B4 1 222 -2 1 875 318 341 54 18 chrX 38079671 38079838 -128570458 + L1M4 LINE L1 4986 5158 -988 1 875 361 311 66 32 chrX 38080189 38080464 -128569832 + L1M4 LINE L1 5566 5852 -312 1 875 263 324 14 0 chrX 38080467 38080538 -128569758 - ID SINE ID -142 82 11 1 875 23 54 0 0 chrX 38080571 38080608 -128569688 + AT_rich Low_complexity Low_complexity 1 37 0 1 875 2941 142 43 19 chrX 38080647 38081184 -128569112 - Lx2A1 LINE L1 -2 7006 6457 1 875 4764 131 17 1 chrX 38081184 38081940 -128568356 + Lx2A1 LINE L1 5689 6456 -552 1 875 33 80 0 0 chrX 38083230 38083305 -128566991 + AT_rich Low_complexity Low_complexity 1 75 0 1 875 491 331 0 34 chrX 38083333 38083480 -128566816 + B1F1 SINE Alu 8 149 0 1 875 26 0 0 0 chrX 38083508 38083534 -128566762 + AT_rich Low_complexity Low_complexity 1 26 0 1 875 297 0 0 0 chrX 38083604 38083637 -128566659 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 875 389 342 54 50 chrX 38083645 38083925 -128566371 - B4A SINE B4 -7 285 5 1 875 21 0 0 0 chrX 38084083 38084104 -128566192 + AT_rich Low_complexity Low_complexity 1 21 0 1 875 1763 225 17 68 chrX 38084368 38084778 -128565518 - MTC LTR MaLR 0 421 33 1 875 358 222 33 41 chrX 38084783 38084905 -128565391 - MTC-int LTR MaLR 0 1258 1138 1 875 4476 79 0 2 chrX 38084905 38085503 -128564793 + L1_Mus3 LINE L1 5817 6413 -225 1 875 494 156 37 20 chrX 38085481 38085598 -128564698 + L1_Mur2 LINE L1 5074 5191 -689 1 875 1472 171 4 8 chrX 38085998 38086264 -128564032 - L1_Mm LINE L1 -77 5806 5542 1 875 3783 158 10 0 chrX 38086258 38086928 -128563368 + L1_Mm LINE L1 4463 5139 -744 1 875 21 57 0 0 chrX 38087758 38087793 -128562503 + AT_rich Low_complexity Low_complexity 1 35 0 1 875 600 126 31 8 chrX 38087965 38088093 -128562203 - L1_Mus3 LINE L1 -2 6636 6506 1 875 12809 110 25 3 chrX 38088301 38088741 -128561555 - L1VL2 LINE L1 -627 2988 2532 1 875 474 18 0 0 chrX 38088741 38088796 -128561500 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 875 12809 103 18 6 chrX 38088796 38091002 -128559294 - L1VL2 LINE L1 -1084 2531 302 1 875 432 95 0 0 chrX 38091003 38091066 -128559230 - L1VL2 LINE L1 -6147 188 126 1 875 566 318 69 35 chrX 38091066 38091268 -128559028 + B3 SINE B2 1 209 -7 1 875 7311 69 1 16 chrX 38091335 38092297 -128557999 - L1_Mus1 LINE L1 0 6567 5620 1 875 238 355 11 0 chrX 38092742 38092835 -128557461 - B1F SINE Alu -5 144 51 1 875 450 0 0 0 chrX 38095127 38095177 -128555119 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 875 377 296 34 75 chrX 38095507 38095653 -128554643 + MIRb SINE MIR 124 263 -5 1 875 2749 312 92 16 chrX 38096193 38097345 -128552951 - Lx8 LINE L1 -37 7436 6197 1 875 309 125 0 0 chrX 38097349 38097405 -128552891 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 875 214 345 57 11 chrX 38097485 38097573 -128552723 + PB1D9 SINE Alu 23 114 -6 1 875 331 246 0 0 chrX 38097594 38097655 -128552641 + ID4 SINE ID 19 79 -4 1 875 333 187 213 0 chrX 38099537 38099612 -128550684 + ORR1E LTR MaLR 31 121 -238 1 875 8285 60 6 9 chrX 38099618 38100961 -128549335 - L1Md_F2 LINE L1 0 6582 5237 1 875 423 0 0 0 chrX 38100961 38101008 -128549288 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 875 468 51 0 0 chrX 38101008 38101066 -128549230 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 875 8285 63 7 5 chrX 38101066 38101504 -128548792 - L1Md_F2 LINE L1 -647 5236 4803 1 875 5818 123 32 6 chrX 38103052 38103986 -128546310 + RMER17B LTR ERVK 1 958 0 1 875 207 0 0 0 chrX 38104086 38104109 -128546187 + (T)n Simple_repeat Simple_repeat 1 23 0 1 875 2865 31 8 0 chrX 38104284 38104636 -128545660 - L1Md_F3 LINE L1 -2 6582 6228 1 875 1742 252 73 14 chrX 38104681 38105176 -128545120 + RMER5 LTR ERV1 1 524 -10 1 875 354 319 54 21 chrX 38106260 38106596 -128543700 - L1M4 LINE L1 -2167 3979 3633 1 875 42 65 0 0 chrX 38106599 38106676 -128543620 + AT_rich Low_complexity Low_complexity 1 77 0 1 875 674 243 74 14 chrX 38106824 38107120 -128543176 + L1MB1 LINE L1 2718 3031 -3115 1 875 395 321 133 16 chrX 38107203 38107526 -128542770 + L1MB1 LINE L1 3922 4282 -1864 1 875 939 323 123 47 chrX 38107728 38107845 -128542451 + Lx9 LINE L1 6808 6926 -718 1 875 1237 113 5 5 chrX 38107845 38108032 -128542264 - B2_Mm2 SINE B2 -8 187 1 1 875 939 323 123 47 chrX 38108032 38108184 -128542112 + Lx9 LINE L1 6927 7085 -559 1 875 342 0 0 0 chrX 38108184 38108222 -128542074 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 875 939 323 123 47 chrX 38108222 38108682 -128541614 + Lx9 LINE L1 7086 7594 -50 1 875 443 253 169 14 chrX 38108741 38109040 -128541256 + L1MB1 LINE L1 5596 5970 -204 1 875 20171 97 6 1 chrX 38109188 38113212 -128537084 + L1Md_F2 LINE L1 594 4667 -1216 1 875 3784 76 8 8 chrX 38113187 38113704 -128536592 + L1Md_F2 LINE L1 5069 5585 -298 1 875 7463 70 8 4 chrX 38113705 38114697 -128535599 + L1Md_F2 LINE L1 5587 6582 0 1 875 350 300 82 65 chrX 38114773 38115068 -128535228 + L1MD LINE L1 5031 5331 -815 1 875 2645 197 48 36 chrX 38115128 38115708 -128534588 + Lx4B LINE L1 6468 7054 -4 1 875 341 258 133 0 chrX 38115726 38115846 -128534450 + Lx9 LINE L1 5781 5916 -1728 1 875 1020 318 70 62 chrX 38116118 38116735 -128533561 + Lx8 LINE L1 6263 6884 -589 1 875 474 253 24 78 chrX 38116918 38117085 -128533211 - Lx6 LINE L1 -26 7434 7277 1 875 926 323 47 7 chrX 38117096 38117604 -128532692 + Lx6 LINE L1 6185 6897 -563 1 875 429 275 138 0 chrX 38117612 38117673 -128532623 + Lx6 LINE L1 7105 7168 -292 1 875 357 62 0 0 chrX 38117673 38117721 -128532575 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 875 429 275 138 0 chrX 38117721 38117797 -128532499 + Lx6 LINE L1 7169 7260 -200 1 875 432 309 57 14 chrX 38117795 38118005 -128532291 + L1MD LINE L1 3625 3843 -2303 1 875 450 0 0 0 chrX 38118223 38118273 -128532023 + (TAGA)n Simple_repeat Simple_repeat 2 51 0 1 875 660 291 33 4 chrX 38118834 38119076 -128531220 + L1MD LINE L1 5523 5771 -408 1 875 292 389 24 0 chrX 38119122 38119248 -128531048 + L2a LINE L2 2962 3090 -336 1 875 495 82 0 0 chrX 38120933 38121006 -128529290 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 875 439 274 0 17 chrX 38121006 38121121 -128529175 - B4A SINE B4 -22 270 158 1 875 274 81 0 0 chrX 38122230 38122267 -128528029 + U2 snRNA snRNA 1 37 -151 1 875 596 238 7 58 chrX 38122614 38122752 -128527544 - B1_Mur1 SINE Alu -9 140 10 1 875 954 58 25 13 chrX 38122753 38122911 -128527385 + (TAGA)n Simple_repeat Simple_repeat 3 162 0 1 875 1190 72 12 12 chrX 38122919 38123087 -128527209 - B2_Mm2 SINE B2 -26 169 2 1 875 597 243 43 0 chrX 38123385 38123595 -128526701 - Lx9 LINE L1 -15 7629 7411 1 875 27148 105 6 44 chrX 38123678 38124718 -128525578 - L1_Mus1 LINE L1 0 6567 5550 1 875 2394 48 6 0 chrX 38124718 38125029 -128525267 - IAPLTR4 LTR ERVK -32 313 1 1 875 27148 105 6 44 chrX 38125029 38125758 -128524538 - L1_Mus1 LINE L1 0 5549 4835 1 875 3576 39 9 5 chrX 38125758 38126201 -128524095 + L1Md_F2 LINE L1 6133 6577 -5 1 875 27148 126 15 70 chrX 38126201 38130691 -128519605 - L1_Mus1 LINE L1 -1049 4834 366 1 875 22 70 0 0 chrX 38130919 38130962 -128519334 + AT_rich Low_complexity Low_complexity 1 43 0 1 875 4474 55 5 0 chrX 38132095 38132655 -128517641 + L1Md_F2 LINE L1 6019 6581 -1 1 875 367 262 35 21 chrX 38132769 38132913 -128517383 + Lx9 LINE L1 7498 7643 -1 1 875 547 314 72 25 chrX 38133634 38133912 -128516384 + B4A SINE B4 2 292 0 1 875 219 323 15 15 chrX 38133972 38134104 -128516192 + GA-rich Low_complexity Low_complexity 1 132 0 1 875 993 201 0 0 chrX 38135517 38135691 -128514605 + Lx5 LINE L1 6726 6899 -151 1 875 1279 225 119 34 chrX 38135691 38136089 -128514207 + RLTR11A LTR ERVK 1 444 -84 1 875 410 198 86 0 chrX 38136222 38136303 -128513993 + Lx6 LINE L1 6910 6997 -463 1 875 3972 114 3 0 chrX 38136298 38136978 -128513318 - L1_Mus4 LINE L1 -718 5918 5235 1 875 4786 119 18 11 chrX 38136978 38137708 -128512588 + L1_Mus4 LINE L1 5896 6630 -6 1 875 2717 28 2 200 chrX 38137720 38138206 -128512090 - RLTR10 LTR ERVK 0 390 1 1 875 233 312 13 13 chrX 38138216 38138294 -128512002 + Lx6 LINE L1 6979 7056 -404 1 875 3084 168 11 4 chrX 38138294 38138820 -128511476 + Lx LINE L1 6117 6646 -8 1 875 1235 249 50 103 chrX 38140002 38140400 -128509896 - MTE2b LTR MaLR -2 377 1 1 875 1325 301 68 89 chrX 38140879 38141713 -128508583 + Lx9 LINE L1 6820 7636 -8 1 875 35 88 0 0 chrX 38141715 38141806 -128508490 + AT_rich Low_complexity Low_complexity 1 91 0 1 876 315 49 0 0 chrX 38144138 38144179 -128506117 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2 876 857 267 36 22 chrX 38144824 38145046 -128505250 - B4 SINE B4 -14 278 54 2 876 245 29 29 0 chrX 38145667 38145701 -128504595 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 876 1057 86 0 7 chrX 38145701 38145841 -128504455 - B1_Mus2 SINE Alu -8 139 1 2 876 219 275 29 117 chrX 38145852 38145955 -128504341 + MIR SINE MIR 96 189 -73 2 876 224 316 35 9 chrX 38147105 38147220 -128503076 + L2c LINE L2 3025 3142 -245 2 876 210 91 0 0 chrX 38147375 38147408 -128502888 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 876 617 251 11 47 chrX 38148223 38148419 -128501877 + MIR3 SINE MIR 1 197 -11 2 876 25 31 0 0 chrX 38149560 38149592 -128500704 + AT_rich Low_complexity Low_complexity 1 32 0 2 876 319 250 71 44 chrX 38149633 38149746 -128500550 + MLT1L LTR MaLR 167 282 -328 2 876 424 323 83 12 chrX 38150349 38150518 -128499778 - B3A SINE B2 -16 182 2 2 876 200 152 0 42 chrX 38150518 38150566 -128499730 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 2 876 231 61 0 0 chrX 38150584 38150617 -128499679 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 2 876 636 194 58 0 chrX 38150622 38150761 -128499535 - B1_Mus2 SINE Alu 0 147 1 2 876 393 276 54 86 chrX 38151032 38151218 -128499078 + Lx7 LINE L1 7180 7359 -337 2 876 266 265 57 38 chrX 38151189 38151346 -128498950 + Lx7 LINE L1 7516 7675 -21 2 876 25 31 0 0 chrX 38151346 38151378 -128498918 + AT_rich Low_complexity Low_complexity 1 32 0 2 876 20380 67 1 1 chrX 38151412 38154102 -128496194 + L1Md_F2 LINE L1 2895 5585 -298 2 876 8095 46 0 1 chrX 38154103 38155131 -128495165 + L1Md_F2 LINE L1 5587 6582 0 2 876 1968 254 134 19 chrX 38155132 38156134 -128494162 + Lx2B LINE L1 5779 6992 -8 2 876 689 333 25 5 chrX 38156147 38156349 -128493947 + Tigger5 DNA MER2_type 32 237 -2169 2 876 659 174 0 114 chrX 38157063 38157212 -128493084 + B1_Mur3 SINE Alu 5 136 -13 2 876 400 288 110 0 chrX 38159929 38160092 -128490204 + L1MCa LINE L1 1337 1517 -4991 2 876 1218 226 50 12 chrX 38160096 38160444 -128489852 + L1VL1 LINE L1 222 794 -5930 2 876 4011 56 2 0 chrX 38160439 38160943 -128489353 + L1Md_F2 LINE L1 5081 5585 -298 2 876 8000 46 2 1 chrX 38160944 38161927 -128488369 + L1Md_F2 LINE L1 5587 6570 -12 2 876 328 227 164 13 chrX 38161935 38162087 -128488209 + L1MCa LINE L1 3308 3482 -2839 2 876 293 355 13 59 chrX 38162163 38162385 -128487911 + MTEa LTR MaLR 1 285 -94 2 876 1555 227 52 75 chrX 38162434 38162889 -128487407 + L1_Mur3 LINE L1 4153 4605 -1275 2 876 408 71 0 0 chrX 38162889 38162945 -128487351 + (CTA)n Simple_repeat Simple_repeat 3 58 0 2 876 1555 227 52 75 chrX 38162945 38163022 -128487274 + L1_Mur3 LINE L1 4606 4673 -1207 2 876 2328 123 115 5 chrX 38163023 38163441 -128486855 + Lx LINE L1 6188 6651 -3 2 876 1691 177 3 3 chrX 38163482 38163788 -128486508 + Lx2 LINE L1 6692 6997 0 2 876 321 224 0 13 chrX 38163818 38163895 -128486401 + L1_Mur3 LINE L1 4657 4732 -1148 2 876 448 332 158 59 chrX 38163894 38164268 -128486028 + Lx8 LINE L1 6350 6760 -713 2 876 2635 170 37 0 chrX 38164279 38164762 -128485534 - L1_Mur2 LINE L1 -635 5242 4742 2 876 1357 177 48 4 chrX 38164761 38165033 -128485263 + L1_Mur2 LINE L1 4453 4736 -1141 2 876 663 324 186 32 chrX 38165062 38165620 -128484676 + Lx8 LINE L1 6830 7473 0 2 876 603 322 129 8 chrX 38165634 38166122 -128484174 + L1MC3 LINE L1 6187 6733 -1052 2 876 309 330 100 22 chrX 38166141 38166321 -128483975 - MER89 LTR ERV1 -5 554 361 2 876 528 234 67 75 chrX 38166380 38166525 -128483771 + L1MC3 LINE L1 7486 7624 -161 2 876 724 114 23 15 chrX 38166525 38166658 -128483638 + L1Md_F2 LINE L1 6448 6581 -1 2 876 528 234 67 75 chrX 38166658 38166794 -128483502 + L1MC3 LINE L1 7625 7765 -20 2 876 288 111 0 0 chrX 38167111 38167156 -128483140 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 876 876 321 45 36 chrX 38168485 38168811 -128481485 - L1M2 LINE L1 -1127 5016 4686 2 876 1181 272 59 17 chrX 38168811 38169166 -128481130 - ORR1D2 LTR MaLR 0 370 1 2 876 876 321 45 36 chrX 38169166 38169305 -128480991 - L1M2 LINE L1 -1458 4685 4547 2 876 507 292 54 19 chrX 38169311 38169766 -128480530 + L1M2 LINE L1 5030 5522 -769 2 876 1229 84 0 11 chrX 38169766 38169947 -128480349 + (GGA)n Simple_repeat Simple_repeat 2 180 0 2 876 1368 67 0 0 chrX 38169956 38170136 -128480160 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 876 741 254 90 6 chrX 38170416 38170737 -128479559 + L1_Mur3 LINE L1 4035 4382 -1498 2 876 1087 228 68 3 chrX 38170792 38171087 -128479209 + L1_Mur3 LINE L1 4674 4987 -893 2 876 412 72 29 0 chrX 38172215 38172284 -128478012 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 876 370 239 77 34 chrX 38172294 38172411 -128477885 - MIR3 SINE MIR 0 208 87 2 876 2087 236 9 119 chrX 38172635 38173281 -128477015 + RMER15 LTR ERVL 1 575 0 2 876 1496 253 94 78 chrX 38173624 38173866 -128476430 - RodERV21-int LTR ERV1 -4 4987 4749 2 876 963 122 0 26 chrX 38173866 38174017 -128476279 - B1_Mus1 SINE Alu 0 148 2 2 876 1496 253 94 78 chrX 38174017 38174263 -128476033 - RodERV21-int LTR ERV1 -243 4748 4491 2 876 656 301 37 82 chrX 38174491 38174867 -128475429 - RLTR19-int LTR ERVK -1755 4382 4024 2 876 1348 243 82 77 chrX 38174904 38175502 -128474794 - RLTR19-int LTR ERVK -2101 4036 3436 2 876 650 189 181 5 chrX 38175653 38175845 -128474451 - RLTR42-int LTR ERVK -4202 1320 1095 2 876 378 0 0 0 chrX 38176066 38176108 -128474188 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 876 315 0 0 0 chrX 38176108 38176142 -128474154 + (GA)n Simple_repeat Simple_repeat 2 36 0 2 876 8168 244 34 30 chrX 38176181 38178166 -128472130 - RodERV21-int LTR ERV1 -2275 2716 724 2 876 27652 168 52 24 chrX 38178174 38179408 -128470888 + L1Md_F2 LINE L1 387 1589 -4294 2 876 1763 111 0 11 chrX 38179408 38179672 -128470624 + L1Md_F2 LINE L1 6312 6572 -10 2 876 27652 98 31 28 chrX 38179672 38179694 -128470602 + L1Md_F2 LINE L1 1590 1590 -4293 2 876 651 26 0 0 chrX 38179694 38179771 -128470525 + (GAAA)n Simple_repeat Simple_repeat 2 78 0 2 876 27652 98 31 28 chrX 38179771 38183665 -128466631 + L1Md_F2 LINE L1 1590 5586 -297 2 876 7411 61 27 2 chrX 38183666 38184634 -128465662 + L1Md_F2 LINE L1 5588 6579 -3 2 876 5461 83 18 12 chrX 38184637 38185416 -128464880 + L1_Mus2 LINE L1 5783 6566 0 2 876 794 252 8 65 chrX 38185417 38185680 -128464616 - RodERV21-int LTR ERV1 -4258 733 486 2 876 423 38 0 0 chrX 38185879 38185932 -128464364 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 876 212 158 0 0 chrX 38186077 38186115 -128464181 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 2 876 35413 34 1 0 chrX 38186526 38192390 -128457906 + L1Md_T LINE L1 1 5589 -297 2 876 8927 8 0 0 chrX 38192390 38193412 -128456884 + L1Md_T LINE L1 5590 6585 0 2 876 1095 83 14 0 chrX 38193645 38193790 -128456506 + B1_Mus1 SINE Alu 1 147 -1 2 876 224 122 24 0 chrX 38193790 38193831 -128456465 + (GAA)n Simple_repeat Simple_repeat 1 42 0 2 876 474 75 0 0 chrX 38193846 38193913 -128456383 + (CA)n Simple_repeat Simple_repeat 1 67 0 2 876 265 258 0 16 chrX 38194036 38194099 -128456197 + CT-rich Low_complexity Low_complexity 5 66 0 2 876 648 74 0 0 chrX 38194099 38194194 -128456102 + (TG)n Simple_repeat Simple_repeat 2 96 0 2 876 769 289 28 46 chrX 38194217 38194500 -128455796 - B4A SINE B4 -14 278 1 2 876 502 323 17 29 chrX 38194699 38194871 -128455425 - B4A SINE B4 -15 277 108 2 876 1047 158 0 27 chrX 38195039 38195227 -128455069 - B2_Mm2 SINE B2 -10 185 3 2 876 305 174 14 0 chrX 38195560 38195629 -128454667 + (TA)n Simple_repeat Simple_repeat 1 70 0 2 876 304 371 132 7 chrX 38195641 38195929 -128454367 + L2b LINE L2 2279 2602 -817 2 876 337 396 40 0 chrX 38196016 38196218 -128454078 + L2b LINE L2 2613 2822 -597 2 876 1880 142 26 23 chrX 38197134 38197480 -128452816 + Lx3_Mus LINE L1 6663 7009 0 2 876 428 253 14 14 chrX 38198173 38198325 -128451971 + Lx7 LINE L1 5705 5856 -1617 2 876 618 51 0 0 chrX 38198344 38198422 -128451874 + (TAGA)n Simple_repeat Simple_repeat 1 78 0 2 876 189 281 65 32 chrX 38199060 38199144 -128451152 + L2b LINE L2 3056 3138 -249 2 876 32 43 0 0 chrX 38199232 38199278 -128451018 + AT_rich Low_complexity Low_complexity 1 46 0 2 876 503 288 15 15 chrX 38199424 38199558 -128450738 - Lx9 LINE L1 -889 6755 6622 2 876 415 234 18 18 chrX 38199556 38199669 -128450627 + Lx9 LINE L1 5862 5974 -1670 2 876 680 312 39 16 chrX 38199721 38200076 -128450220 + Lx9 LINE L1 6009 6518 -1126 2 876 988 316 74 68 chrX 38200087 38201628 -128448668 - L1M3 LINE L1 -1788 4352 2803 2 876 3677 87 0 2 chrX 38202135 38202631 -128447665 + L1_Mus1 LINE L1 6073 6567 0 2 876 244 235 8 50 chrX 38202638 38202759 -128447537 + A-rich Low_complexity Low_complexity 2 117 0 2 876 276 169 31 0 chrX 38204088 38204153 -128446143 - Lx9 LINE L1 -7 7637 7571 2 876 251 381 63 11 chrX 38204278 38204453 -128445843 + MIRc SINE MIR 14 197 -71 2 876 5181 133 24 5 chrX 38204466 38205302 -128444994 + Lx LINE L1 5803 6654 0 2 876 209 279 243 0 chrX 38205544 38205680 -128444616 + MIRb SINE MIR 60 228 -40 2 876 233 357 50 70 chrX 38205838 38206079 -128444217 - MIRb SINE MIR -16 252 17 2 876 192 125 0 0 chrX 38206388 38206420 -128443876 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 876 524 231 102 60 chrX 38206715 38206881 -128443415 - RMER1B Other Other -893 173 1 2 876 620 248 45 32 chrX 38206920 38207141 -128443155 + RMER1A Other Other 807 1030 0 2 876 259 320 0 10 chrX 38207137 38207235 -128443061 - Lx8 LINE L1 -12 7461 7365 2 876 569 96 28 19 chrX 38207241 38207347 -128442949 - L1Md_F2 LINE L1 0 6582 6476 2 876 5006 111 11 22 chrX 38207347 38208169 -128442127 + MusHAL1 LINE L1 797 1609 -1103 2 876 763 188 14 77 chrX 38209472 38209680 -128440616 + B2_Mm2 SINE B2 1 195 0 2 876 279 0 0 0 chrX 38209689 38209720 -128440576 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 876 4222 61 2 4 chrX 38209902 38210445 -128439851 + L1Md_F2 LINE L1 6040 6581 -1 2 876 33 0 0 0 chrX 38212531 38212564 -128437732 + AT_rich Low_complexity Low_complexity 1 33 0 2 876 644 264 65 39 chrX 38213247 38213401 -128436895 + RSINE1 SINE B4 8 165 0 2 876 33 25 0 0 chrX 38213539 38213579 -128436717 + AT_rich Low_complexity Low_complexity 1 40 0 2 876 547 350 6 41 chrX 38213835 38214005 -128436291 - RSINE1 SINE B4 0 165 2 2 876 443 299 92 77 chrX 38214746 38214757 -128435539 - B4 SINE B4 -56 236 221 2 876 465 34 0 0 chrX 38214763 38214822 -128435474 + (TGGA)n Simple_repeat Simple_repeat 1 59 0 2 876 837 196 0 7 chrX 38214822 38214964 -128435332 - B1_Mus1 SINE Alu -6 142 1 2 876 443 299 92 77 chrX 38214964 38215011 -128435285 - B4 SINE B4 -72 220 27 2 876 2635 114 20 2 chrX 38215388 38215794 -128434502 - L1_Mus3 LINE L1 -4 6634 6222 2 876 4883 164 2 18 chrX 38215794 38216664 -128433632 + L1_Mm LINE L1 4452 5307 -576 2 876 603 320 78 17 chrX 38216718 38216735 -128433561 - B4A SINE B4 -5 287 270 2 876 725 79 0 9 chrX 38216735 38216850 -128433446 + (TG)n Simple_repeat Simple_repeat 2 115 0 2 876 603 320 78 17 chrX 38216850 38217064 -128433232 - B4A SINE B4 -23 269 42 2 876 449 308 47 19 chrX 38217109 38217324 -128432972 - L1MA6 LINE L1 -178 6122 5902 3 876 1548 249 40 66 chrX 38217434 38217987 -128432309 + Lx8 LINE L1 5348 5920 -1553 3 876 35084 37 4 5 chrX 38217987 38223497 -128426799 + L1Md_A LINE L1 136 5585 -298 3 876 8290 37 1 0 chrX 38223498 38224492 -128425804 + L1Md_A LINE L1 5587 6581 -1 3 876 1262 322 73 26 chrX 38224637 38225243 -128425053 + Lx9 LINE L1 6580 7213 -431 3 876 280 208 34 128 chrX 38225534 38225683 -128424613 - RLTR15 LTR ERVK -191 168 34 3 876 261 322 101 32 chrX 38225708 38225897 -128424399 + Lx9 LINE L1 7216 7417 -227 3 876 44 46 0 0 chrX 38226035 38226100 -128424196 + AT_rich Low_complexity Low_complexity 1 65 0 3 876 315 316 385 30 chrX 38226117 38226449 -128423847 + Lx8 LINE L1 6829 7278 -195 3 876 24 53 0 0 chrX 38226676 38226714 -128423582 + AT_rich Low_complexity Low_complexity 1 38 0 3 876 313 287 16 32 chrX 38226885 38227011 -128423285 + L1MEg LINE L1 1815 1938 -4146 3 876 216 97 0 0 chrX 38227415 38227446 -128422850 + (GAAA)n Simple_repeat Simple_repeat 1 31 0 3 876 326 320 50 87 chrX 38228347 38228645 -128421651 - B4A SINE B4 -4 288 2 3 876 519 148 0 0 chrX 38230162 38230261 -128420035 - L1_Mur3 LINE L1 -1010 5434 5302 3 876 6946 102 36 14 chrX 38230260 38231679 -128418617 + L1_Mus3 LINE L1 5195 6635 -3 3 876 1263 169 73 0 chrX 38231675 38231936 -128418360 - L1_Mur3 LINE L1 -564 5316 5037 3 876 4727 235 78 35 chrX 38231934 38233338 -128416958 + Lx6 LINE L1 5413 6880 -816 3 876 453 116 0 0 chrX 38233338 38233407 -128416889 + (CATA)n Simple_repeat Simple_repeat 2 70 0 3 876 3915 281 104 50 chrX 38233407 38234173 -128416123 + Lx6 LINE L1 6881 7696 0 3 876 377 280 62 31 chrX 38234187 38234316 -128415980 + MER117 DNA MER1_type 12 144 -53 3 876 26 0 0 0 chrX 38235630 38235656 -128414640 + AT_rich Low_complexity Low_complexity 1 26 0 3 876 249 154 19 37 chrX 38235936 38235990 -128414306 + Lx5 LINE L1 6929 6981 -69 3 876 366 341 168 49 chrX 38236115 38236359 -128413937 - B4A SINE B4 -16 276 4 3 876 300 330 0 0 chrX 38237197 38237294 -128413002 + MIRb SINE MIR 166 262 -6 3 876 297 319 0 0 chrX 38237519 38237588 -128412708 + RMER30 DNA MER1_type 133 201 -1 3 876 220 268 23 58 chrX 38238684 38238771 -128411525 + MIRc SINE MIR 60 143 -125 3 876 691 236 39 18 chrX 38239112 38239367 -128410929 - RMER19B LTR ERVK 0 902 507 3 876 2114 84 0 14 chrX 38239367 38239656 -128410640 - L1_Mm LINE L1 -75 5808 5524 3 876 4106 74 0 6 chrX 38239659 38240203 -128410093 + L1_Mus2 LINE L1 6025 6565 -1 3 876 1313 47 0 6 chrX 38240223 38240393 -128409903 + (GAAA)n Simple_repeat Simple_repeat 2 170 0 3 876 309 178 21 46 chrX 38240403 38240517 -128409779 - RMER19B LTR ERVK -390 512 308 3 876 2981 152 7 31 chrX 38240537 38241092 -128409204 - Lx4B LINE L1 -1128 4749 4208 3 876 1209 176 41 19 chrX 38241092 38241359 -128408937 + Lx4B LINE L1 4753 5025 -852 3 876 7540 160 62 34 chrX 38241368 38242658 -128407638 + Lx4B LINE L1 5589 6937 -121 3 876 486 0 0 0 chrX 38242658 38242712 -128407584 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 876 7540 160 62 34 chrX 38242712 38242852 -128407444 + Lx4B LINE L1 6938 7058 0 3 876 4162 103 9 14 chrX 38243992 38244622 -128405674 - Lx2 LINE L1 -1 6996 6370 3 876 1381 64 82 10 chrX 38244750 38244956 -128405340 - L1_Mus2 LINE L1 -1 6565 6345 3 876 885 129 13 5 chrX 38244973 38245119 -128405177 - B2_Mm2 SINE B2 -61 155 2 3 876 301 346 118 14 chrX 38246368 38246588 -128403708 + L3 LINE CR1 3622 3864 -625 3 876 208 350 2 73 chrX 38247417 38247556 -128402740 - MIRb SINE MIR -128 140 7 3 876 1018 89 0 0 chrX 38247901 38248036 -128402260 + B1_Mus2 SINE Alu 1 135 -12 3 876 183 42 0 0 chrX 38248037 38248061 -128402235 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 876 611 273 14 94 chrX 38248262 38248537 -128401759 - Lx7 LINE L1 -286 7410 7158 3 876 511 226 214 28 chrX 38248609 38248752 -128401544 + B3 SINE B2 1 180 -36 3 876 234 62 0 0 chrX 38248752 38248784 -128401512 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 876 511 226 214 28 chrX 38248784 38248822 -128401474 + B3 SINE B2 181 216 0 3 876 371 272 63 8 chrX 38248915 38249041 -128401255 + Lx7 LINE L1 7160 7292 -404 3 876 341 184 0 9 chrX 38249094 38249204 -128401092 + GA-rich Low_complexity Low_complexity 2 110 0 3 876 3442 36 0 7 chrX 38249393 38249812 -128400484 + L1Md_F2 LINE L1 6153 6568 -14 3 876 292 312 118 9 chrX 38249822 38249932 -128400364 - MER46C DNA MER2_type -54 284 163 3 876 440 258 133 19 chrX 38250498 38250622 -128399674 - B1F SINE Alu 0 120 1 3 876 226 382 0 0 chrX 38250625 38250714 -128399582 - BC1_Mm scRNA scRNA -47 105 17 3 876 2446 91 108 15 chrX 38251448 38251837 -128398459 + Lx3_Mus LINE L1 6585 7009 0 3 876 217 341 49 49 chrX 38251886 38252071 -128398225 + L3 LINE CR1 4297 4481 -8 3 876 1030 122 50 6 chrX 38252936 38253118 -128397178 + L1_Mus3 LINE L1 6446 6635 -3 3 876 865 324 84 18 chrX 38253647 38254028 -128396268 - MLT1A1 LTR MaLR 0 408 3 3 876 370 208 72 10 chrX 38254321 38254418 -128395878 + L1MD1 LINE L1 6139 6241 -1 3 876 568 289 0 43 chrX 38254631 38254772 -128395524 - B1_Mur1 SINE Alu -8 141 7 3 876 1833 222 18 23 chrX 38254901 38255288 -128395008 + Lx5 LINE L1 6666 7050 0 3 876 249 33 0 0 chrX 38255290 38255320 -128394976 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 3 876 1516 102 43 0 chrX 38255475 38255710 -128394586 - Lx LINE L1 -1 6653 6409 3 876 892 306 30 8 chrX 38257169 38257532 -128392764 - L1M2 LINE L1 -873 5270 4900 3 876 1044 281 107 43 chrX 38257547 38258156 -128392140 + Lx9 LINE L1 3439 4086 -1761 3 876 515 268 69 32 chrX 38258929 38259118 -128391178 + Lx9 LINE L1 4088 4295 -1848 3 876 1263 173 148 21 chrX 38259126 38259410 -128390886 - ORR1A4 LTR MaLR -8 321 2 3 876 7907 153 93 144 chrX 38259412 38261478 -128388818 - ORR1A4-int LTR MaLR -2 1961 2 3 876 1113 201 145 40 chrX 38261481 38261777 -128388519 - ORR1A4 LTR MaLR -2 327 1 3 876 2408 241 85 24 chrX 38261807 38261922 -128388374 + Lx9 LINE L1 4295 4438 -1409 3 876 2126 211 7 9 chrX 38261922 38262344 -128387952 + MTC LTR MaLR 1 421 0 3 876 2408 241 85 24 chrX 38262344 38263022 -128387274 + Lx9 LINE L1 4439 5138 -709 3 876 645 14 0 0 chrX 38263022 38263096 -128387200 + (GAA)n Simple_repeat Simple_repeat 3 76 0 3 876 2408 241 85 24 chrX 38263096 38263191 -128387105 + Lx9 LINE L1 5139 5239 -608 3 876 901 116 30 30 chrX 38263271 38263440 -128386856 + MusHAL1 LINE L1 218 386 -2326 3 876 492 163 12 0 chrX 38263419 38263505 -128386791 + L1_Mm LINE L1 4848 4934 -949 3 876 1664 29 0 5 chrX 38263507 38263713 -128386583 - L1Md_F3 LINE L1 -14 6570 6366 3 876 2885 30 0 0 chrX 38263713 38264048 -128386248 + L1Md_T LINE L1 5995 6329 -253 3 876 826 130 22 0 chrX 38264037 38264175 -128386121 + L1_Mm LINE L1 4911 5051 -832 3 876 18893 41 4 0 chrX 38264175 38267091 -128383205 + L1_Mus3 LINE L1 3634 6564 -2 3 876 24874 140 18 5 chrX 38267077 38271344 -128378952 + L1_Mus3 LINE L1 1537 5864 -774 3 876 297 0 0 0 chrX 38271344 38271377 -128378919 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 876 7294 88 21 0 chrX 38271377 38272115 -128378181 + L1_Mus3 LINE L1 5865 6617 -21 3 876 422 101 14 0 chrX 38272141 38272210 -128378086 + (GA)n Simple_repeat Simple_repeat 2 71 0 3 876 1797 271 48 14 chrX 38272210 38272886 -128377410 + Lx9 LINE L1 5228 5981 -1663 3 877 234 0 0 0 chrX 38273142 38273168 -128377128 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 877 350 244 89 0 chrX 38273816 38273906 -128376390 + RMER1B Other Other 391 488 -578 3 877 658 311 26 0 chrX 38273918 38274108 -128376188 + RMER1A Other Other 1 195 -835 3 877 1645 281 49 12 chrX 38274110 38274538 -128375758 + RMER1A Other Other 9 452 -578 3 877 454 159 23 0 chrX 38274541 38274629 -128375667 + RMER1A Other Other 941 1030 0 3 877 241 233 216 40 chrX 38274806 38274931 -128375365 - B1F1 SINE Alu -2 147 1 3 877 25 0 0 0 chrX 38276462 38276487 -128373809 + AT_rich Low_complexity Low_complexity 1 25 0 3 877 831 272 57 101 chrX 38276774 38277159 -128373137 + MTE2a LTR MaLR 12 379 0 3 877 533 355 43 43 chrX 38277170 38277452 -128372844 - B4A SINE B4 0 292 11 3 877 382 280 11 0 chrX 38277750 38277843 -128372453 + LTR52 LTR ERVL 204 297 -124 3 877 432 0 0 0 chrX 38277872 38277920 -128372376 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 877 644 312 83 9 chrX 38278340 38278557 -128371739 + MER102b DNA MER1_type 29 261 -80 3 877 344 291 43 68 chrX 38279211 38279373 -128370923 + L1M4c LINE L1 1680 1920 -4543 3 877 28 48 0 0 chrX 38279478 38279520 -128370776 + AT_rich Low_complexity Low_complexity 1 42 0 3 877 456 326 51 87 chrX 38281802 38282114 -128368182 + Lx8 LINE L1 7158 7458 -15 3 877 23 0 0 0 chrX 38282271 38282294 -128368002 + AT_rich Low_complexity Low_complexity 1 23 0 3 877 21 0 0 0 chrX 38283030 38283051 -128367245 + AT_rich Low_complexity Low_complexity 1 21 0 3 877 190 160 40 0 chrX 38283692 38283742 -128366554 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 877 206 299 116 84 chrX 38283847 38283942 -128366354 + MIR3 SINE MIR 83 180 -28 3 877 413 335 91 34 chrX 38284375 38284672 -128365624 - MTE-int LTR MaLR -36 1544 1231 3 877 379 381 55 16 chrX 38284679 38284935 -128365361 - MTE-int LTR MaLR -463 1117 852 3 877 300 111 0 0 chrX 38285727 38285772 -128364524 + (TTTC)n Simple_repeat Simple_repeat 2 46 0 3 877 3386 43 0 0 chrX 38285934 38286330 -128363966 - MTA_Mm LTR MaLR 0 396 1 3 877 9333 26 2 1 chrX 38286330 38287427 -128362869 - MTA_Mm-int LTR MaLR 0 1098 1 3 877 3386 43 0 0 chrX 38287427 38287823 -128362473 - MTA_Mm LTR MaLR 0 396 1 3 877 421 391 54 57 chrX 38287888 38288219 -128362077 - MTE-int LTR MaLR -1188 392 63 3 877 1745 215 47 5 chrX 38290166 38290573 -128359723 - Lx2B LINE L1 -23 6977 6554 3 877 321 240 34 122 chrX 38291947 38292006 -128358290 + L1MB2 LINE L1 5222 5285 -858 3 877 1128 82 0 0 chrX 38292006 38292153 -128358143 + B1_Mm SINE Alu 1 147 0 3 877 321 240 34 122 chrX 38292153 38292240 -128358056 + L1MB2 LINE L1 5286 5355 -788 3 877 434 310 128 0 chrX 38292256 38292353 -128357943 + L1MB2 LINE L1 5494 5593 -587 3 877 216 0 0 0 chrX 38292353 38292377 -128357919 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 877 434 310 128 0 chrX 38292377 38292521 -128357775 + L1MB2 LINE L1 5594 5765 -415 3 877 245 287 32 65 chrX 38292521 38292614 -128357682 + MT2B LTR ERVL 168 257 -344 3 877 411 225 0 3 chrX 38292548 38292636 -128357660 + B1_Mur3 SINE Alu 40 126 -23 3 877 258 99 13 53 chrX 38292642 38292717 -128357579 + (TTTG)n Simple_repeat Simple_repeat 2 73 0 3 877 275 282 130 0 chrX 38292845 38292976 -128357320 + L1MB2 LINE L1 5977 6124 -47 3 877 196 365 71 20 chrX 38294014 38294112 -128356184 + MIR SINE MIR 46 148 -60 3 877 250 280 0 0 chrX 38294230 38294305 -128355991 + CT-rich Low_complexity Low_complexity 2 76 0 3 877 614 308 30 0 chrX 38294561 38294795 -128355501 - L1M2 LINE L1 -536 5755 5515 3 877 2263 44 0 0 chrX 38294883 38295158 -128355138 - L1Md_A LINE L1 0 6582 6308 3 877 2797 30 0 0 chrX 38295158 38295489 -128354807 + L1Md_A LINE L1 5830 6160 -422 3 877 372 316 106 67 chrX 38295526 38295601 -128354695 - L1M4 LINE L1 -3141 3005 2941 3 877 432 307 77 73 chrX 38295601 38295875 -128354421 - B4 SINE B4 -16 276 2 3 877 372 281 233 56 chrX 38295875 38296338 -128353958 - L1M4 LINE L1 -3206 2940 2382 3 877 794 289 141 0 chrX 38296352 38296454 -128353842 - Lx9 LINE L1 -1 7643 7536 4 877 1203 107 0 0 chrX 38296454 38296632 -128353664 + (TTTCC)n Simple_repeat Simple_repeat 3 180 0 4 877 276 30 0 0 chrX 38296634 38296667 -128353629 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 4 877 794 289 141 0 chrX 38296667 38296952 -128353344 - Lx9 LINE L1 -109 7535 7202 4 877 988 96 0 0 chrX 38296973 38297108 -128353188 - B1_Mus1 SINE Alu 0 148 14 4 877 235 132 0 0 chrX 38297111 38297149 -128353147 + tRNA-Arg-AGA tRNA tRNA 1 38 -38 4 877 230 209 0 0 chrX 38297175 38297218 -128353078 - Lx9 LINE L1 -465 7179 7137 4 877 1481 295 62 18 chrX 38297234 38297735 -128352561 - Lx8 LINE L1 -652 6821 6299 4 877 229 342 57 31 chrX 38299166 38299361 -128350935 - MIR SINE MIR -50 218 32 4 877 285 262 47 23 chrX 38299686 38299772 -128350524 + MER103 DNA DNA 21 108 -58 4 877 1277 288 87 29 chrX 38300639 38301409 -128348887 - L1_Mur3 LINE L1 -1983 3897 3115 4 877 38187 47 0 3 chrX 38301901 38308827 -128341469 - L1Md_T LINE L1 0 6585 1 4 877 528 275 172 13 chrX 38308982 38309459 -128340837 + L1_Mur3 LINE L1 3895 4488 -1392 4 877 318 26 0 0 chrX 38309469 38309508 -128340788 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 877 1049 68 0 14 chrX 38309797 38309945 -128340351 + (TTTTC)n Simple_repeat Simple_repeat 1 146 0 4 877 265 368 32 65 chrX 38310264 38310418 -128339878 + MER117 DNA MER1_type 1 149 -48 4 877 2881 139 22 4 chrX 38311598 38312097 -128338199 - L1_Mur2 LINE L1 -1266 4611 4104 4 877 837 141 0 7 chrX 38312095 38312231 -128338065 - L1_Mur2 LINE L1 -1998 3879 3745 4 877 2894 184 38 0 chrX 38312230 38312735 -128337561 + Lx5 LINE L1 6351 6874 -176 4 877 2197 44 36 20 chrX 38312755 38313057 -128337239 - IAPLTR2b LTR ERVK -20 307 1 4 877 674 226 6 18 chrX 38313066 38313233 -128337063 + Lx5 LINE L1 6881 7045 -5 4 877 684 289 15 39 chrX 38313506 38313711 -128336585 - B3 SINE B2 -1 215 16 4 877 322 345 0 9 chrX 38314155 38314266 -128336030 + MIRb SINE MIR 40 149 -119 4 877 207 0 0 0 chrX 38315059 38315082 -128335214 + (A)n Simple_repeat Simple_repeat 1 23 0 4 877 1296 267 65 10 chrX 38315107 38315504 -128334792 + MTD LTR MaLR 1 419 0 4 877 636 218 92 48 chrX 38315745 38315952 -128334344 - Lx4B LINE L1 -23 7035 6820 4 877 187 426 44 0 chrX 38316171 38316239 -128334057 - L3 LINE CR1 -1502 2987 2917 4 877 247 250 25 12 chrX 38316368 38316449 -128333847 + MLT1I LTR MaLR 328 409 -2 4 877 23 0 0 0 chrX 38317562 38317585 -128332711 + AT_rich Low_complexity Low_complexity 1 23 0 4 877 715 280 31 1 chrX 38317908 38318163 -128332133 + Lx8 LINE L1 5667 5927 -1546 4 877 1575 302 47 20 chrX 38318173 38318711 -128331585 + Lx8 LINE L1 6367 6918 -555 4 877 5064 24 0 0 chrX 38318715 38319305 -128330991 + L1Md_T LINE L1 4997 5586 -297 4 877 8443 33 0 0 chrX 38319305 38320301 -128329995 + L1Md_T LINE L1 5587 6582 0 4 877 465 19 0 0 chrX 38320323 38320377 -128329919 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 877 21 36 0 0 chrX 38320418 38320446 -128329850 + AT_rich Low_complexity Low_complexity 1 28 0 4 877 334 228 10 10 chrX 38320636 38320738 -128329558 + (TA)n Simple_repeat Simple_repeat 2 103 0 4 877 304 271 173 0 chrX 38320738 38320871 -128329425 - L1_Mur3 LINE L1 -2057 3823 3668 4 877 226 152 22 0 chrX 38320871 38320917 -128329379 + ORR1C2 LTR MaLR 1 47 -337 4 877 450 328 97 0 chrX 38320921 38321116 -128329180 + Lx8 LINE L1 6911 7124 -349 4 877 797 236 28 11 chrX 38321213 38321393 -128328903 + ORR1D1 LTR MaLR 1 183 -191 4 877 733 101 28 28 chrX 38321424 38321567 -128328729 + L1_Mus4 LINE L1 6484 6626 -10 4 877 357 378 12 24 chrX 38321763 38321931 -128328365 - MamRep137 DNA TcMar? -36 408 243 4 877 786 267 24 5 chrX 38322005 38322212 -128328084 + B3 SINE B2 4 214 -2 4 877 1146 82 0 0 chrX 38322439 38322585 -128327711 + B1_Mus2 SINE Alu 1 146 -1 4 877 359 16 46 31 chrX 38322586 38322651 -128327645 + (CAAAAA)n Simple_repeat Simple_repeat 4 69 0 4 877 1281 205 51 0 chrX 38322788 38323042 -128327254 - RMER6D LTR ERVK 0 720 454 4 877 574 256 52 85 chrX 38323005 38323253 -128327043 + RMER12 LTR ERVK 1081 1320 -2 4 877 1051 248 109 33 chrX 38323550 38323854 -128326442 - RMER12 LTR ERVK 0 1322 996 4 877 468 35 0 0 chrX 38323857 38323915 -128326381 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 877 873 104 0 0 chrX 38323954 38324089 -128326207 + (TGGA)n Simple_repeat Simple_repeat 1 135 0 4 877 3475 171 77 6 chrX 38324117 38324804 -128325492 - RMER12 LTR ERVK -586 736 1 4 877 845 285 52 37 chrX 38324811 38325219 -128325077 + L1MB2 LINE L1 4484 4897 -1243 4 877 594 295 5 102 chrX 38325236 38325432 -128324864 + B3 SINE B2 40 216 0 4 877 361 269 47 52 chrX 38325433 38325664 -128324632 + L1MB2 LINE L1 4895 5131 -1015 4 877 726 276 128 23 chrX 38325817 38326162 -128324134 + L1MB2 LINE L1 5628 6008 -163 4 877 498 333 11 0 chrX 38326199 38326388 -128323908 + Lx9 LINE L1 7233 7423 -221 4 877 606 28 0 0 chrX 38326680 38326752 -128323544 + (TC)n Simple_repeat Simple_repeat 1 72 0 4 877 5241 112 67 5 chrX 38326805 38327647 -128322649 - Lx2 LINE L1 -2 6995 6102 4 877 323 293 19 0 chrX 38327669 38327792 -128322504 + L1MB2 LINE L1 6025 6150 -162 4 877 1067 216 4 61 chrX 38328022 38328283 -128322013 - RLTR40 LTR ERVK -29 788 543 4 877 619 189 0 0 chrX 38328278 38328384 -128321912 - RLTR40 LTR ERVK -711 106 1 4 877 338 247 41 0 chrX 38328705 38328778 -128321518 + B3A SINE B2 1 76 -122 4 877 560 84 0 12 chrX 38329151 38329235 -128321061 + (GGGA)n Simple_repeat Simple_repeat 4 86 0 4 877 25 31 0 0 chrX 38329435 38329467 -128320829 + AT_rich Low_complexity Low_complexity 1 32 0 4 877 592 328 6 0 chrX 38329470 38329647 -128320649 - B3A SINE B2 -16 182 5 4 877 24 53 0 0 chrX 38329874 38329912 -128320384 + AT_rich Low_complexity Low_complexity 1 38 0 4 877 21 36 0 0 chrX 38330985 38331013 -128319283 + AT_rich Low_complexity Low_complexity 1 28 0 4 877 195 42 0 0 chrX 38331068 38331092 -128319204 + (CATATA)n Simple_repeat Simple_repeat 1 24 0 4 877 1153 307 56 40 chrX 38331729 38332300 -128317996 - Lx9 LINE L1 -411 7233 6654 4 877 559 277 96 17 chrX 38332335 38332636 -128317660 + Lx9 LINE L1 4457 4781 -1066 4 877 5921 105 13 4 chrX 38332690 38333742 -128316554 + L1Md_F2 LINE L1 365 1431 -4452 4 877 22848 91 3 1 chrX 38333742 38336936 -128313360 + L1Md_F2 LINE L1 2383 5584 -299 4 877 7278 80 1 13 chrX 38336938 38337560 -128312736 + L1Md_F2 LINE L1 5587 6208 -374 4 877 1613 144 196 0 chrX 38337560 38337957 -128312339 - IAPLTR2_Mm LTR ERVK 0 475 1 4 877 7278 80 1 13 chrX 38337957 38338334 -128311962 + L1Md_F2 LINE L1 6209 6574 -8 4 877 1133 221 69 114 chrX 38338335 38338816 -128311480 + Lx9 LINE L1 4770 5228 -619 4 877 1380 296 16 44 chrX 38338826 38338931 -128311365 + Lx7 LINE L1 6771 6868 -828 4 877 1879 164 68 78 chrX 38338931 38339329 -128310967 + ORR1B1 LTR MaLR 1 394 0 4 877 1380 296 16 44 chrX 38339329 38339771 -128310525 + Lx7 LINE L1 6869 7302 -394 4 877 567 0 0 0 chrX 38339772 38339835 -128310461 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 877 234 0 0 0 chrX 38339835 38339860 -128310436 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 877 235 225 27 27 chrX 38340149 38340222 -128310074 + Lx7 LINE L1 7613 7685 -11 4 877 1891 259 113 21 chrX 38340195 38340615 -128309681 + Lx9 LINE L1 5272 5756 -1717 4 877 426 20 0 0 chrX 38340615 38340666 -128309630 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 877 1891 354 66 39 chrX 38340666 38340830 -128309466 + Lx9 LINE L1 5757 5916 -1557 4 877 180 0 0 0 chrX 38340830 38340850 -128309446 + (TA)n Simple_repeat Simple_repeat 1 20 0 4 877 2965 314 47 27 chrX 38340850 38342365 -128307931 + Lx9 LINE L1 5917 7471 -2 4 877 282 95 0 0 chrX 38342608 38342650 -128307646 + (T)n Simple_repeat Simple_repeat 1 42 0 4 877 1230 171 71 57 chrX 38342657 38342954 -128307342 - Lx4B LINE L1 0 7058 6758 4 877 230 337 20 10 chrX 38344477 38344576 -128305720 - MER20 DNA MER1_type -5 214 115 4 877 601 13 26 0 chrX 38344785 38344863 -128305433 + (TAGA)n Simple_repeat Simple_repeat 2 81 0 4 877 866 359 51 49 chrX 38344877 38345366 -128304930 - MLT2B3 LTR ERVL -64 490 1 4 877 1204 339 53 34 chrX 38345762 38346491 -128303805 + Lx8 LINE L1 6700 7442 -31 4 877 41170 4 0 0 chrX 38346729 38353097 -128297199 - L1Md_A LINE L1 -1 6581 214 4 877 24 32 0 0 chrX 38353279 38353310 -128296986 + AT_rich Low_complexity Low_complexity 1 31 0 4 877 471 35 0 0 chrX 38353321 38353378 -128296918 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 877 379 345 58 0 chrX 38353395 38353534 -128296762 - RSINE1 SINE B4 -18 147 1 4 877 821 119 96 7 chrX 38353614 38353749 -128296547 - B1_Mus1 SINE Alu -1 147 1 4 877 209 324 29 0 chrX 38354261 38354329 -128295967 + GA-rich Low_complexity Low_complexity 2 71 0 4 877 239 114 0 22 chrX 38354511 38354556 -128295740 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 4 877 702 312 156 34 chrX 38354992 38355320 -128294976 - ORR1D2 LTR MaLR -2 368 1 4 877 823 278 246 17 chrX 38355431 38356100 -128294196 + L1MA6 LINE L1 5417 6238 -62 4 877 377 146 0 0 chrX 38356497 38356552 -128293744 + B3 SINE B2 2 56 -160 4 877 207 368 0 0 chrX 38356613 38356700 -128293596 + GA-rich Low_complexity Low_complexity 2 88 0 4 877 450 0 0 0 chrX 38357174 38357224 -128293072 + (A)n Simple_repeat Simple_repeat 1 50 0 4 877 337 236 0 0 chrX 38357711 38357783 -128292513 - B2_Mm2 SINE B2 -122 73 2 4 877 241 263 105 0 chrX 38357873 38357949 -128292347 - MamGypLTR2c LTR Gypsy -1 1067 984 4 877 3775 230 66 6 chrX 38358445 38359293 -128291003 + Lx5 LINE L1 6150 7048 -2 4 877 308 259 35 25 chrX 38359382 38359495 -128290801 + MIRc SINE MIR 73 189 -73 4 877 32143 81 10 6 chrX 38359497 38364624 -128285672 + L1Md_F3 LINE L1 441 5584 -299 4 877 8234 34 6 3 chrX 38364626 38365621 -128284675 + L1Md_F3 LINE L1 5587 6584 0 4 877 2405 77 0 0 chrX 38365629 38365941 -128284355 - L1Md_F2 LINE L1 -637 5945 5634 4 877 4016 98 7 10 chrX 38365941 38366528 -128283768 + L1Md_F2 LINE L1 5986 6570 -12 4 877 626 265 76 34 chrX 38366863 38367191 -128283105 - RLTR15 LTR ERVK -17 342 1 4 877 298 234 0 0 chrX 38368163 38368240 -128282056 + CT-rich Low_complexity Low_complexity 2 78 0 4 877 354 23 0 0 chrX 38368241 38368284 -128282012 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 877 279 359 57 1 chrX 38369211 38369382 -128280914 + MIRb SINE MIR 10 184 -78 4 877 848 331 90 42 chrX 38369526 38369598 -128280698 + MLT1D LTR MaLR 49 115 -390 4 877 2168 185 32 12 chrX 38369598 38370009 -128280287 + MTC LTR MaLR 3 421 0 4 877 848 331 90 42 chrX 38370009 38370368 -128279928 + MLT1D LTR MaLR 116 501 -4 4 877 856 282 52 43 chrX 38370813 38371281 -128279015 + L1_Rod LINE L1 5289 5745 -102 4 877 454 364 53 20 chrX 38371276 38371523 -128278773 + Lx8 LINE L1 7035 7289 -184 4 877 22 70 0 0 chrX 38371721 38371764 -128278532 + AT_rich Low_complexity Low_complexity 1 43 0 4 877 1536 161 17 37 chrX 38371796 38372093 -128278203 - RMER6C LTR ERVK -2 688 398 4 877 214 217 60 12 chrX 38372093 38372177 -128278119 + (AACTG)n Simple_repeat Simple_repeat 3 90 0 5 877 1635 137 111 116 chrX 38372183 38372562 -128277734 - RMER6C LTR ERVK -312 378 2 4 877 955 294 55 52 chrX 38372562 38372843 -128277453 - ORR1E LTR MaLR -75 284 3 5 877 279 325 69 38 chrX 38373564 38373695 -128276601 - L2c LINE L2 -17 3370 3236 5 877 216 67 0 0 chrX 38373743 38373773 -128276523 + (GA)n Simple_repeat Simple_repeat 1 30 0 5 877 384 111 0 0 chrX 38373773 38373836 -128276460 + (TG)n Simple_repeat Simple_repeat 1 63 0 5 877 1199 262 107 3 chrX 38373962 38374299 -128275997 + ORR1D1 LTR MaLR 1 372 -2 5 877 2493 220 40 17 chrX 38374301 38374879 -128275417 + ORR1D1-int LTR MaLR 1 591 -779 5 877 2145 186 13 5 chrX 38375073 38375521 -128274775 + L1VL4 LINE L1 482 933 -5369 5 877 22182 171 22 32 chrX 38375514 38379033 -128271263 + Lx2A LINE L1 1406 4879 -1007 5 877 2383 60 3 12 chrX 38379033 38379354 -128270942 - L1_Mus1 LINE L1 -1 6566 6249 5 877 6436 101 20 3 chrX 38379361 38380303 -128269993 - Lx3_Mus LINE L1 -5 7004 6047 5 877 22182 143 15 39 chrX 38380303 38382239 -128268057 + Lx2A LINE L1 4880 6813 -195 5 877 2873 52 52 0 chrX 38382239 38382608 -128267688 - RLTR10 LTR ERVK -2 388 1 5 877 8510 128 12 42 chrX 38382608 38382824 -128267472 + Lx2A LINE L1 6814 6997 -11 5 877 288 130 0 0 chrX 38382825 38382871 -128267425 + (GA)n Simple_repeat Simple_repeat 2 47 0 5 877 654 79 0 0 chrX 38382876 38382965 -128267331 + (GGAA)n Simple_repeat Simple_repeat 1 89 0 5 877 2969 234 55 77 chrX 38382968 38383653 -128266643 + ORR1D1-int LTR MaLR 550 1189 -181 5 877 519 45 0 0 chrX 38383653 38383719 -128266577 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 877 2969 234 55 77 chrX 38383719 38383847 -128266449 + ORR1D1-int LTR MaLR 1190 1344 -26 5 877 1440 244 50 11 chrX 38383852 38384160 -128266136 + ORR1D1 LTR MaLR 1 323 -51 5 877 4201 119 3 26 chrX 38384160 38384823 -128265473 + Lx2A1 LINE L1 6354 7001 -7 5 877 423 0 0 0 chrX 38384826 38384873 -128265423 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 877 1440 244 50 11 chrX 38384873 38384920 -128265376 + ORR1D1 LTR MaLR 324 368 -6 5 877 931 240 60 0 chrX 38384938 38385138 -128265158 - B3 SINE B2 0 216 5 5 877 5756 58 4 0 chrX 38385373 38386101 -128264195 + L1_Mus1 LINE L1 5836 6566 -1 5 877 23 33 0 0 chrX 38386101 38386131 -128264165 + AT_rich Low_complexity Low_complexity 1 30 0 5 877 531 320 15 84 chrX 38387415 38387595 -128262701 + L1ME3 LINE L1 5783 5957 -205 5 877 661 286 16 0 chrX 38387595 38387780 -128262516 - MER5A DNA MER1_type -1 188 1 5 877 531 320 15 84 chrX 38387780 38388002 -128262294 + L1ME3 LINE L1 5958 6157 -5 5 877 184 362 10 49 chrX 38388004 38388162 -128262134 + MIRm SINE MIR 23 170 -92 5 877 358 132 0 0 chrX 38389020 38389073 -128261223 + ORR1C2 LTR MaLR 1 53 -331 5 877 209 368 9 36 chrX 38389140 38389250 -128261046 + MIRc SINE MIR 20 126 -142 5 877 1596 173 89 3 chrX 38389261 38389575 -128260721 + ORR1B2 LTR MaLR 27 367 0 5 877 21 0 0 0 chrX 38389614 38389635 -128260661 + AT_rich Low_complexity Low_complexity 1 21 0 5 877 291 265 24 24 chrX 38389647 38389732 -128260564 + Lx9 LINE L1 5828 5912 -1732 5 877 21 0 0 0 chrX 38390103 38390124 -128260172 + AT_rich Low_complexity Low_complexity 1 21 0 5 877 404 259 188 7 chrX 38390124 38390268 -128260028 - MTC LTR MaLR -56 365 196 5 877 230 75 50 0 chrX 38390289 38390329 -128259967 + (TTTTG)n Simple_repeat Simple_repeat 3 44 0 5 877 8983 131 26 29 chrX 38390506 38392547 -128257749 - Lx2 LINE L1 -8 6989 4980 5 877 14888 134 39 55 chrX 38392559 38394541 -128255755 - L1_Mur2 LINE L1 -315 5562 3526 5 877 3791 43 6 0 chrX 38394541 38395009 -128255287 + L1Md_F3 LINE L1 6099 6569 -15 5 877 358 85 119 0 chrX 38395018 38395077 -128255219 + PB1D9 SINE Alu 1 66 -54 5 877 14888 134 39 55 chrX 38395077 38395615 -128254681 - L1_Mur2 LINE L1 -2352 3517 3032 5 877 3209 68 5 5 chrX 38395615 38396042 -128254254 - L1_Mus1 LINE L1 -1 6566 6140 5 877 14888 134 39 55 chrX 38396042 38396276 -128254020 - L1_Mur2 LINE L1 -2846 3031 2779 5 877 1082 103 0 0 chrX 38396276 38396422 -128253874 - B1_Mus1 SINE Alu -2 146 1 5 877 14888 134 39 55 chrX 38396422 38396473 -128253823 - L1_Mur2 LINE L1 -3099 2778 2734 5 877 384 209 0 0 chrX 38396514 38396600 -128253696 + (TA)n Simple_repeat Simple_repeat 1 86 0 5 877 514 333 49 5 chrX 38396684 38396868 -128253428 - ORR1E LTR MaLR -2 357 166 5 877 395 80 4 0 chrX 38396873 38396926 -128253370 + L1Md_F2 LINE L1 5540 5615 -568 5 877 8228 35 2 6 chrX 38396926 38397925 -128252371 + L1Md_F2 LINE L1 5587 6581 -1 5 877 226 192 38 19 chrX 38398021 38398074 -128252222 - ORR1E-int LTR MaLR -19 1944 1891 5 877 428 322 58 0 chrX 38398970 38399091 -128251205 + MIR3 SINE MIR 70 197 -11 5 877 579 165 0 0 chrX 38399484 38399593 -128250703 + (TG)n Simple_repeat Simple_repeat 2 110 0 5 877 287 257 19 139 chrX 38399963 38400121 -128250175 + MIRb SINE MIR 129 267 -1 5 877 24 0 0 0 chrX 38400405 38400429 -128249867 + AT_rich Low_complexity Low_complexity 1 24 0 5 877 30 0 0 0 chrX 38400772 38400802 -128249494 + AT_rich Low_complexity Low_complexity 1 30 0 5 877 2263 113 0 3 chrX 38401309 38401621 -128248675 + RLTR10E LTR ERVK 1 311 0 5 877 911 170 0 0 chrX 38403502 38403649 -128246647 - B1_Mus1 SINE Alu 0 148 2 5 878 21 0 0 0 chrX 38404152 38404173 -128246123 + AT_rich Low_complexity Low_complexity 1 21 0 5 878 407 380 8 0 chrX 38404478 38404607 -128245689 - L2b LINE L2 -2 3373 3244 5 878 2007 196 49 62 chrX 38404638 38404972 -128245324 - Lx7 LINE L1 0 7696 7364 5 878 278 0 54 0 chrX 38404972 38405009 -128245287 + (TAAAA)n Simple_repeat Simple_repeat 3 41 0 5 878 2007 196 49 62 chrX 38405009 38405202 -128245094 - Lx7 LINE L1 -333 7363 7176 5 878 2340 227 30 58 chrX 38405198 38405796 -128244500 - Lx7 LINE L1 -1079 6617 6037 5 878 654 292 23 14 chrX 38406549 38406821 -128243475 - L1MA6 LINE L1 0 6300 6021 5 878 29 38 0 19 chrX 38407374 38407388 -128242908 + AT_rich Low_complexity Low_complexity 1 14 0 5 878 582 293 0 47 chrX 38407388 38407560 -128242736 + RSINE1 SINE B4 1 164 -1 5 878 29 38 0 19 chrX 38407560 38407599 -128242697 + AT_rich Low_complexity Low_complexity 1 39 0 5 878 28 0 0 0 chrX 38407905 38407933 -128242363 + AT_rich Low_complexity Low_complexity 1 28 0 5 878 3575 298 52 11 chrX 38408069 38409203 -128241093 - Lx8 LINE L1 -30 7443 6263 5 878 287 25 25 0 chrX 38409250 38409290 -128241006 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 5 878 535 299 108 20 chrX 38409522 38409949 -128240347 - L1MA6 LINE L1 -356 5935 5464 5 878 1694 240 131 42 chrX 38409957 38410584 -128239712 + RMER6C LTR ERVK 7 689 -1 5 878 233 279 102 19 chrX 38410741 38410898 -128239398 - L1MA6 LINE L1 -824 5319 5150 5 878 501 306 116 25 chrX 38410975 38411381 -128238915 - L1MA6 LINE L1 -1094 5049 4607 5 878 243 173 0 0 chrX 38411520 38411572 -128238724 + CT-rich Low_complexity Low_complexity 1 52 0 5 878 483 280 75 29 chrX 38411679 38411852 -128238444 - B3A SINE B2 -16 182 2 5 878 25 0 0 0 chrX 38412392 38412417 -128237879 + AT_rich Low_complexity Low_complexity 1 25 0 5 878 418 129 12 12 chrX 38412615 38412701 -128237595 + (TA)n Simple_repeat Simple_repeat 1 86 0 5 878 3168 218 91 5 chrX 38412786 38413537 -128236759 - Lx2B LINE L1 0 7000 6186 5 878 522 154 0 46 chrX 38413533 38413621 -128236675 - L1_Mur2 LINE L1 -503 5374 5290 5 878 2666 101 8 13 chrX 38413621 38414011 -128236285 - Lx LINE L1 -2 6652 6265 5 878 522 154 0 46 chrX 38414011 38414031 -128236265 - L1_Mur2 LINE L1 -588 5289 5271 5 878 4315 128 28 4 chrX 38414031 38414743 -128235553 - L1_Mur2 LINE L1 -805 5072 4344 5 878 200 121 30 0 chrX 38414949 38414982 -128235314 + CT-rich Low_complexity Low_complexity 3 36 0 5 878 1101 102 0 0 chrX 38414982 38415129 -128235167 - B1_Mus1 SINE Alu 0 148 2 5 878 585 291 100 28 chrX 38415561 38415698 -128234598 - Lx8 LINE L1 -1576 5897 5762 5 878 360 0 0 0 chrX 38415698 38415738 -128234558 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 878 585 298 71 37 chrX 38415738 38416001 -128234295 - Lx8 LINE L1 -528 5772 5515 5 878 334 338 95 33 chrX 38417533 38417775 -128232521 - L1ME3B LINE L1 -360 5880 5624 5 878 270 0 0 0 chrX 38417779 38417809 -128232487 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 878 250 175 16 95 chrX 38417825 38417888 -128232408 - Lx8 LINE L1 -743 5569 5512 5 878 196 352 70 47 chrX 38419168 38419441 -128230855 + L2b LINE L2 3114 3371 -4 5 878 436 310 130 24 chrX 38419613 38419821 -128230475 - MIR SINE MIR -19 243 14 5 878 421 357 50 10 chrX 38420006 38420207 -128230089 + MIRb SINE MIR 29 237 -31 5 878 621 0 0 0 chrX 38421317 38421386 -128228910 + (TC)n Simple_repeat Simple_repeat 2 70 0 5 878 261 109 0 0 chrX 38421394 38421440 -128228856 + (TATG)n Simple_repeat Simple_repeat 4 49 0 5 878 202 296 209 36 chrX 38422377 38422573 -128227723 + MIRb SINE MIR 31 260 -8 5 878 1406 214 75 23 chrX 38423086 38423431 -128226865 - ORR1D1 LTR MaLR -8 366 4 5 878 495 329 7 0 chrX 38424488 38424628 -128225668 - ID_B1 SINE B4 -3 221 81 5 878 1891 184 98 16 chrX 38424934 38425321 -128224975 - MTC LTR MaLR -2 419 1 5 878 227 252 58 42 chrX 38426191 38426311 -128223985 - ORR1D1-int LTR MaLR -634 1329 1208 5 878 706 337 89 37 chrX 38426802 38426935 -128223361 - B4A SINE B4 -6 286 140 5 878 987 144 209 0 chrX 38426935 38427122 -128223174 - URR1A DNA MER1_type 0 226 1 5 878 706 337 89 37 chrX 38427122 38427259 -128223037 - B4A SINE B4 -153 139 2 5 878 4315 106 31 14 chrX 38427991 38428641 -128221655 + Lx LINE L1 5994 6654 0 5 878 275 293 39 5 chrX 38428774 38428878 -128221418 + PB1D10 SINE Alu 4 113 -7 5 878 365 131 0 0 chrX 38429062 38429123 -128221173 - Lx3B LINE L1 -1 6972 6912 5 878 405 58 0 0 chrX 38429201 38429253 -128221043 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 5 878 5463 198 60 2 chrX 38429253 38430525 -128219771 - Lx4B LINE L1 -31 6969 5610 5 878 5199 157 14 42 chrX 38430525 38431452 -128218844 + RMER19B LTR ERVK 1 901 -1 5 878 6055 161 16 3 chrX 38431453 38432425 -128217871 - Lx4B LINE L1 -268 5609 4627 5 878 221 0 35 0 chrX 38432425 38432454 -128217842 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 878 6055 161 16 3 chrX 38432454 38432570 -128217726 - Lx4B LINE L1 -1251 4626 4509 5 878 3809 134 12 3 chrX 38432590 38433183 -128217113 - Lx2 LINE L1 -19 6978 6381 5 878 519 31 0 0 chrX 38434368 38434433 -128215863 + (CTA)n Simple_repeat Simple_repeat 1 65 0 5 878 215 261 77 0 chrX 38434448 38434513 -128215783 - MIR SINE MIR -89 173 104 5 878 2131 153 11 16 chrX 38436234 38436606 -128213690 + Lx2 LINE L1 6627 6996 -1 5 878 12165 157 27 6 chrX 38436699 38439137 -128211159 - Lx2A LINE L1 -990 6018 3522 5 878 4860 150 32 88 chrX 38439130 38440169 -128210127 + Lx2A LINE L1 6027 7006 -2 5 878 4353 97 21 11 chrX 38440646 38441270 -128209026 - Lx3_Mus LINE L1 -5 7004 6375 5 878 258 331 168 6 chrX 38441672 38441845 -128208451 + L1MC LINE L1 5499 5699 -2183 5 878 477 339 76 42 chrX 38442343 38442605 -128207691 + Lx8 LINE L1 7203 7473 0 5 878 186 71 0 0 chrX 38442610 38442638 -128207658 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 5 878 718 282 56 9 chrX 38442638 38442853 -128207443 + Lx9 LINE L1 6401 6625 -1019 5 878 1879 291 87 26 chrX 38442871 38443629 -128206667 + Lx9 LINE L1 6681 7484 -160 5 878 1212 246 43 43 chrX 38444132 38444502 -128205794 - ORR1D2 LTR MaLR 0 370 1 5 878 306 286 26 74 chrX 38445744 38445933 -128204363 + L1MEe LINE L1 932 1111 -3743 6 878 413 214 0 0 chrX 38446021 38446091 -128204205 + B1_Mur4 SINE Alu 1 70 -80 6 878 524 15 15 0 chrX 38446200 38446265 -128204031 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 6 878 22 35 0 0 chrX 38446838 38446867 -128203429 + AT_rich Low_complexity Low_complexity 1 29 0 6 878 28 86 0 0 chrX 38447145 38447215 -128203081 + AT_rich Low_complexity Low_complexity 1 70 0 6 878 248 222 0 0 chrX 38447331 38447376 -128202920 - Lx5 LINE L1 -175 6875 6831 6 878 440 90 45 0 chrX 38447522 38447589 -128202707 + L1Md_A LINE L1 256 325 -6291 6 878 35716 47 27 9 chrX 38447590 38452816 -128197480 + L1Md_A LINE L1 263 5586 -297 6 878 8248 42 1 0 chrX 38452816 38453810 -128196486 + L1Md_A LINE L1 5587 6581 -1 6 878 237 392 17 0 chrX 38453826 38453946 -128196350 - MIRb SINE MIR -121 147 26 6 878 2399 148 24 17 chrX 38454432 38454850 -128195446 + MTC LTR MaLR 1 421 0 6 878 538 270 102 30 chrX 38454957 38455124 -128195172 - B3 SINE B2 -2 214 31 6 878 321 26 0 0 chrX 38455128 38455166 -128195130 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 878 2339 305 92 29 chrX 38455203 38456253 -128194043 + Lx9 LINE L1 6360 7459 -185 6 878 360 43 0 0 chrX 38456253 38456299 -128193997 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 878 2339 305 92 29 chrX 38456299 38456407 -128193889 + Lx9 LINE L1 7460 7591 -53 6 878 1510 60 0 0 chrX 38456827 38457012 -128193284 + L1Md_F2 LINE L1 5402 5586 -297 6 878 7339 78 7 2 chrX 38457013 38457995 -128192301 + L1Md_F2 LINE L1 5591 6577 -5 6 878 282 29 0 0 chrX 38457999 38458034 -128192262 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 878 288 0 0 0 chrX 38458196 38458228 -128192068 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 6 878 3176 205 96 14 chrX 38458621 38459327 -128190969 + Lx5 LINE L1 6284 7047 -3 6 878 739 299 85 77 chrX 38459952 38460235 -128190061 + RLTR40 LTR ERVK 19 296 -521 6 878 234 0 0 0 chrX 38460235 38460261 -128190035 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 878 739 299 85 77 chrX 38460261 38460447 -128189849 + RLTR40 LTR ERVK 297 492 -325 6 878 318 145 48 0 chrX 38460447 38460509 -128189787 - L1_Mur3 LINE L1 -1396 4484 4420 6 878 7545 53 1 3 chrX 38460508 38462045 -128188251 - L1Md_F2 LINE L1 -4 6578 5047 6 878 734 281 110 44 chrX 38462079 38462351 -128187945 + ORR1E LTR MaLR 1 290 -69 6 878 7016 121 21 10 chrX 38462354 38463706 -128186590 + Lx LINE L1 5272 6650 -4 6 878 219 161 172 35 chrX 38463715 38463773 -128186523 + PB1D10 SINE Alu 51 116 -1 6 878 282 167 0 18 chrX 38463822 38463877 -128186419 + ORR1E LTR MaLR 317 370 0 6 878 326 211 11 0 chrX 38463882 38463977 -128186319 - L1MCa LINE L1 -2962 3359 3264 6 878 1736 244 51 10 chrX 38464117 38464531 -128185765 - Lx6 LINE L1 -2 7458 7028 6 878 3086 138 77 95 chrX 38464531 38465195 -128185101 - RMER21B LTR ERV1 0 842 191 6 878 5865 204 79 26 chrX 38465212 38466656 -128183640 - Lx6 LINE L1 -430 7030 5522 6 878 3732 233 87 8 chrX 38466689 38467581 -128182715 - Lx5 LINE L1 -6 7044 6066 6 878 4365 158 23 14 chrX 38467577 38468392 -128181904 + L1_Mur2 LINE L1 4297 5119 -758 6 878 22 0 0 0 chrX 38468426 38468448 -128181848 + AT_rich Low_complexity Low_complexity 1 22 0 6 878 2879 65 13 3 chrX 38468448 38468832 -128181464 - Lx3_Mus LINE L1 0 7009 6622 6 878 874 291 36 36 chrX 38468841 38469269 -128181027 - L1MCa LINE L1 -3143 3172 2740 6 878 2147 127 9 0 chrX 38469269 38469593 -128180703 - ORR1A2 LTR MaLR 0 327 1 6 878 874 289 33 35 chrX 38469593 38469687 -128180609 - L1MCa LINE L1 -3582 2739 2646 6 878 306 309 70 57 chrX 38469868 38470026 -128180270 - L1MCa LINE L1 -6345 163 4 6 878 1939 229 94 11 chrX 38471306 38471849 -128178447 + Lx9 LINE L1 7049 7636 -8 6 878 330 132 0 0 chrX 38472276 38472329 -128177967 + (T)n Simple_repeat Simple_repeat 1 53 0 6 878 216 311 54 0 chrX 38472626 38472700 -128177596 + MIR SINE MIR 76 153 -115 6 878 1157 233 87 41 chrX 38472843 38473197 -128177099 - Lx5 LINE L1 -3 7047 6702 6 878 890 277 0 19 chrX 38473293 38473503 -128176793 - B3 SINE B2 -5 211 6 6 878 279 0 0 0 chrX 38474516 38474547 -128175749 + (TA)n Simple_repeat Simple_repeat 1 31 0 6 878 323 271 15 92 chrX 38474875 38475005 -128175291 - RLTR40 LTR ERVK -218 599 480 6 878 690 214 0 0 chrX 38475022 38475167 -128175129 - Lx7 LINE L1 -17 7679 7535 6 878 15896 113 42 5 chrX 38475170 38478755 -128171541 + L1Md_A LINE L1 446 4285 -1601 6 878 965 53 0 0 chrX 38478755 38478886 -128171410 + L1Md_T LINE L1 6450 6580 -2 6 878 13615 292 115 41 chrX 38478886 38479083 -128171213 + L1Md_A LINE L1 4286 4306 -1580 6 878 1110 88 0 0 chrX 38479083 38479230 -128171066 - B1_Mus1 SINE Alu 0 148 2 6 878 322 307 116 46 chrX 38479230 38479247 -128171049 + L1MC3 LINE L1 3409 3423 -2723 6 878 282 29 0 0 chrX 38479247 38479282 -128171014 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 878 322 307 116 46 chrX 38479282 38479547 -128170749 + L1MC3 LINE L1 3424 3732 -2414 6 878 567 66 0 0 chrX 38479565 38479641 -128170655 + (TA)n Simple_repeat Simple_repeat 2 77 0 6 878 453 36 0 0 chrX 38479640 38479695 -128170601 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 878 538 324 16 32 chrX 38479696 38479881 -128170415 - B3A SINE B2 -16 182 1 6 878 21 36 0 0 chrX 38480046 38480074 -128170222 + AT_rich Low_complexity Low_complexity 1 28 0 6 878 1078 313 46 17 chrX 38480089 38480499 -128169797 + Lx8 LINE L1 6278 6699 -774 6 878 251 319 10 78 chrX 38480500 38480602 -128169694 - MTE2a LTR MaLR -245 134 40 6 878 278 221 126 11 chrX 38480583 38480670 -128169626 - MTE2a LTR MaLR -282 97 1 6 878 874 294 181 14 chrX 38480679 38481565 -128168731 + L1MC3 LINE L1 5377 6450 -1545 6 878 231 299 133 21 chrX 38481583 38481725 -128168571 + L1MC3 LINE L1 6469 6618 -1167 6 878 2946 74 13 8 chrX 38481725 38482119 -128168177 + MTA_Mm LTR MaLR 1 396 0 6 878 231 299 133 21 chrX 38482119 38482164 -128168132 + L1MC3 LINE L1 6619 6676 -1109 6 878 270 0 0 0 chrX 38482210 38482240 -128168056 + (T)n Simple_repeat Simple_repeat 1 30 0 6 878 1188 43 0 0 chrX 38482242 38482383 -128167913 - B1_Mus1 SINE Alu -7 141 1 6 878 415 355 15 0 chrX 38482385 38482585 -128167711 + L1MC3 LINE L1 6719 6921 -864 6 878 282 318 67 15 chrX 38482638 38482772 -128167524 - L1MC3 LINE L1 -1400 6385 6245 6 878 302 308 70 24 chrX 38482777 38482990 -128167306 + L1MC3 LINE L1 6969 7191 -594 6 878 33 43 0 0 chrX 38483005 38483052 -128167244 + AT_rich Low_complexity Low_complexity 1 47 0 6 878 321 364 14 0 chrX 38483240 38483380 -128166916 - Lx7 LINE L1 -366 7330 7189 6 878 1123 196 18 9 chrX 38483411 38483633 -128166663 + URR1A DNA MER1_type 1 224 -2 6 878 1395 245 48 39 chrX 38483649 38483853 -128166443 - Lx6 LINE L1 -347 7113 7027 6 878 1757 159 6 63 chrX 38483853 38484202 -128166094 - ORR1A4 LTR MaLR 0 329 1 6 878 1395 181 54 29 chrX 38484202 38484386 -128165910 - Lx6 LINE L1 -434 7026 6829 6 878 339 292 69 31 chrX 38484379 38484538 -128165758 + L1MC3 LINE L1 7219 7383 -402 6 878 493 277 89 55 chrX 38484592 38484863 -128165433 + L1MA7 LINE L1 6003 6282 -9 6 878 948 123 94 0 chrX 38484869 38484988 -128165308 - Lx LINE L1 0 6654 6520 6 878 231 36 0 0 chrX 38484988 38485016 -128165280 + (CCCA)n Simple_repeat Simple_repeat 2 29 0 6 878 948 123 94 0 chrX 38485016 38485067 -128165229 - Lx LINE L1 -135 6519 6469 6 878 1044 151 0 0 chrX 38485101 38485280 -128165016 + GA-rich Low_complexity Low_complexity 2 180 0 6 878 264 244 39 45 chrX 38485331 38485424 -128164872 + PB1D10 SINE Alu 39 133 -16 6 878 351 214 42 17 chrX 38485430 38485549 -128164747 + L1MC3 LINE L1 7521 7642 -143 6 878 21 36 0 0 chrX 38486621 38486649 -128163647 + AT_rich Low_complexity Low_complexity 1 28 0 6 878 348 24 0 0 chrX 38486820 38486861 -128163435 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 878 962 101 0 11 chrX 38486861 38487041 -128163255 + (GA)n Simple_repeat Simple_repeat 2 180 0 6 878 270 366 69 76 chrX 38487116 38487261 -128163035 + RSINE1 SINE B4 16 159 -6 6 878 375 23 0 0 chrX 38487967 38488011 -128162285 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 6 878 1223 28 0 0 chrX 38488066 38488210 -128162086 - B1_Mm SINE Alu -3 144 1 6 878 678 290 81 16 chrX 38488438 38488624 -128161672 + RMER30 DNA MER1_type 5 202 0 6 878 701 289 41 15 chrX 38488633 38488830 -128161466 + MLT2C1 LTR ERVL 134 335 -62 6 878 495 0 0 0 chrX 38488830 38488885 -128161411 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 878 243 252 119 59 chrX 38488907 38489025 -128161271 - MIR SINE MIR -67 141 17 6 878 210 344 27 26 chrX 38489231 38489319 -128160977 - MIR SINE MIR -56 152 64 6 878 372 344 56 36 chrX 38489970 38490166 -128160130 - MLT1F2 LTR MaLR -335 225 26 6 878 23 0 0 0 chrX 38490986 38491009 -128159287 + AT_rich Low_complexity Low_complexity 1 23 0 6 878 218 310 17 0 chrX 38491013 38491071 -128159225 - B1F SINE Alu -88 61 3 6 878 4498 44 2 5 chrX 38491285 38491836 -128158460 - L1Md_F2 LINE L1 -4 6578 6030 6 878 302 253 0 13 chrX 38492506 38492582 -128157714 - MamRep1161 DNA TcMar -881 76 2 6 878 333 0 0 0 chrX 38492843 38492880 -128157416 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 878 381 43 0 0 chrX 38492880 38492926 -128157370 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 878 594 28 0 0 chrX 38493040 38493112 -128157184 + (TC)n Simple_repeat Simple_repeat 2 73 0 6 878 285 396 29 29 chrX 38493220 38493428 -128156868 + MIRb SINE MIR 1 208 -60 6 878 730 315 39 35 chrX 38493465 38493751 -128156545 - B4A SINE B4 0 292 6 6 878 21 36 0 0 chrX 38493846 38493874 -128156422 + AT_rich Low_complexity Low_complexity 1 28 0 6 878 310 302 74 19 chrX 38494284 38494392 -128155904 - MIRc SINE MIR -106 162 49 6 878 2284 191 61 23 chrX 38496489 38497397 -128152899 + L1_Rod LINE L1 881 1824 -4023 6 878 949 192 14 5 chrX 38497457 38497671 -128152625 + L1_Rod LINE L1 2558 2773 -3074 6 878 968 219 14 37 chrX 38497672 38497890 -128152406 - ORR1C1 LTR MaLR -2 376 164 6 878 628 216 152 31 chrX 38497915 38498137 -128152159 - ORR1D1 LTR MaLR -115 255 1 6 878 895 244 45 48 chrX 38498137 38498516 -128151780 + L1_Rod LINE L1 2773 3150 -2697 6 878 553 303 42 58 chrX 38498742 38498813 -128151483 + Lx8 LINE L1 6805 6874 -599 6 878 1310 236 35 57 chrX 38498813 38499218 -128151078 - RMER10B LTR ERVL -2 396 1 6 878 553 324 34 81 chrX 38499218 38499556 -128150740 + Lx8 LINE L1 6860 7168 -528 6 878 1429 174 58 19 chrX 38499690 38500000 -128150296 + L1_Mur2 LINE L1 2111 2432 -3445 6 878 9845 160 34 25 chrX 38500000 38501760 -128148536 + L1_Mur1 LINE L1 2443 4219 -1667 1 878 1206 81 0 0 chrX 38501760 38501933 -128148363 - L1Md_F2 LINE L1 0 6582 6410 2 878 9845 160 34 25 chrX 38501933 38502291 -128148005 + L1_Mur1 LINE L1 4220 4580 -1306 1 878 2374 243 83 14 chrX 38502293 38503007 -128147289 + Lx2B LINE L1 6233 6995 -5 3 878 661 234 76 13 chrX 38503250 38503475 -128146821 - L1_Rod LINE L1 -1091 4756 4518 4 878 259 91 78 0 chrX 38503516 38503593 -128146703 + (TTTG)n Simple_repeat Simple_repeat 3 85 0 5 878 533 141 240 0 chrX 38503593 38503714 -128146582 - B1_Mur4 SINE Alu 0 150 1 6 878 247 211 0 0 chrX 38503717 38503774 -128146522 - L1M3 LINE L1 -1587 4553 4497 7 878 1072 243 33 33 chrX 38503968 38504270 -128146026 - Lx5 LINE L1 -2 7048 6747 8 878 519 241 39 58 chrX 38504284 38504428 -128145868 - L1_Rod LINE L1 -1507 4340 4197 4 878 2621 209 43 2 chrX 38504428 38504980 -128145316 + RMER15 LTR ERVL 1 575 0 9 878 519 241 39 58 chrX 38504980 38505042 -128145254 - L1_Rod LINE L1 -1651 4196 4138 4 878 548 214 23 38 chrX 38505058 38505211 -128145085 + RLTR13D3 LTR ERVK 12 162 -952 1 878 15620 84 3 3 chrX 38505211 38508397 -128141899 + L1Md_F LINE L1 408 3592 -2291 1 878 3985 83 27 8 chrX 38508397 38508994 -128141302 + L1Md_F LINE L1 4716 5323 -560 1 878 2869 102 0 12 chrX 38508994 38509412 -128140884 + L1Md_F2 LINE L1 6170 6582 0 1 878 271 284 29 10 chrX 38509420 38509523 -128140773 - L1_Rod LINE L1 -1766 4081 3977 4 878 2363 120 3 75 chrX 38509609 38509996 -128140300 + RLTR10D LTR ERVK 1 359 0 1 878 1196 52 0 13 chrX 38509996 38510153 -128140143 + IAP-d-int LTR ERVK 1 155 -6387 1 878 731 216 5 59 chrX 38510155 38510376 -128139920 + IAP-d-int LTR ERVK 295 503 -6039 1 878 7402 60 12 38 chrX 38510376 38511418 -128138878 + IAP-d-int LTR ERVK 5007 6021 -521 1 878 3233 63 2 2 chrX 38511421 38511836 -128138460 + IAP-d-int LTR ERVK 6128 6542 0 1 878 2363 114 3 75 chrX 38511836 38512223 -128138073 + RLTR10D LTR ERVK 1 359 0 1 878 2000 301 81 51 chrX 38512223 38513391 -128136905 + Lx9 LINE L1 6422 7624 -20 1 878 657 285 59 121 chrX 38513730 38514185 -128136111 + RLTR11B LTR ERVK 31 482 -46 1 878 276 353 82 15 chrX 38514228 38514363 -128135933 - MIR SINE MIR -80 182 39 1 878 217 390 49 16 chrX 38514396 38514581 -128135715 - L3 LINE CR1 -1179 3310 3120 1 878 29 94 0 0 chrX 38515442 38515527 -128134769 + AT_rich Low_complexity Low_complexity 1 85 0 1 878 315 394 73 29 chrX 38515547 38516023 -128134273 - L2a LINE L2 -17 3409 2913 1 878 297 51 0 0 chrX 38516523 38516562 -128133734 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 878 338 310 119 96 chrX 38516586 38516804 -128133492 + ID_B1 SINE B4 2 224 0 2 878 21 0 0 0 chrX 38516847 38516868 -128133428 + AT_rich Low_complexity Low_complexity 1 21 0 2 878 781 139 0 0 chrX 38517039 38517168 -128133128 - Lx2 LINE L1 0 6997 6869 2 878 925 260 29 13 chrX 38517504 38517819 -128132477 + L1VL4 LINE L1 182 501 -5801 2 878 17092 164 24 11 chrX 38517826 38519023 -128131273 + Lx LINE L1 2396 3646 -2237 2 878 2693 77 11 3 chrX 38519023 38519399 -128130897 + L1Md_F2 LINE L1 6204 6582 0 2 878 17092 164 24 11 chrX 38519399 38520043 -128130253 + Lx LINE L1 3647 4282 -1601 2 878 1307 69 62 11 chrX 38520043 38520220 -128130076 + B2_Mm2 SINE B2 2 187 -8 2 878 17092 164 24 11 chrX 38520220 38520557 -128129739 + Lx LINE L1 4283 4615 -1268 2 878 192 77 0 0 chrX 38520557 38520583 -128129713 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 878 17092 138 18 7 chrX 38520583 38522600 -128127696 + Lx LINE L1 4616 6648 -6 2 878 286 280 216 50 chrX 38523982 38524121 -128126175 + ORR1D1 LTR MaLR 3 164 -210 2 878 674 24 12 0 chrX 38524121 38524205 -128126091 + (TC)n Simple_repeat Simple_repeat 2 86 0 3 878 302 281 52 10 chrX 38524258 38524355 -128125941 + ORR1D1 LTR MaLR 272 372 -2 2 878 1147 248 172 55 chrX 38524481 38524848 -128125448 + MTD LTR MaLR 10 419 0 3 878 260 298 87 0 chrX 38525656 38525760 -128124536 + Lx8 LINE L1 7154 7266 -207 3 878 377 212 0 0 chrX 38525762 38525828 -128124468 + RMER15 LTR ERVL 405 470 -105 3 878 480 77 0 0 chrX 38526003 38526068 -128124228 + (CTTG)n Simple_repeat Simple_repeat 2 66 0 3 878 802 194 0 0 chrX 38526068 38526207 -128124089 - B1_Mus1 SINE Alu -9 139 1 3 878 206 370 86 7 chrX 38526471 38526610 -128123686 - L2 LINE L2 -614 2805 2656 3 878 427 322 21 0 chrX 38526967 38527110 -128123186 - Lx9 LINE L1 -853 6791 6646 3 878 376 304 14 0 chrX 38527157 38527295 -128123001 + Lx9 LINE L1 6861 7000 -644 3 878 36213 31 1 0 chrX 38527315 38534172 -128116124 - L1Md_T LINE L1 0 6585 1 3 878 695 306 80 80 chrX 38534238 38534359 -128115937 + Lx9 LINE L1 7001 7116 -528 3 878 3874 108 5 16 chrX 38534359 38534934 -128115362 + Lx3A LINE L1 6398 6966 -15 4 878 441 0 0 0 chrX 38534942 38534991 -128115305 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 109 695 306 80 80 chrX 38534991 38535333 -128114963 + Lx9 LINE L1 7122 7473 -171 3 879 2810 57 20 0 chrX 38535460 38535814 -128114482 + L1_Mus1 LINE L1 6205 6565 -2 4 879 225 330 77 39 chrX 38536085 38536189 -128114107 - L2 LINE L2 -571 2848 2741 4 879 201 231 58 0 chrX 38536376 38536428 -128113868 - MIRm SINE MIR -9 267 213 4 879 17843 28 1 12 chrX 38536611 38539641 -128110655 - L1Md_A LINE L1 -2428 3455 465 4 879 5616 238 30 23 chrX 38539645 38539726 -128110570 + Lx7 LINE L1 5877 5956 -1740 4 879 3155 53 8 0 chrX 38539726 38540119 -128110177 + MTA_Mm LTR MaLR 1 396 0 4 879 5616 240 37 24 chrX 38540119 38541712 -128108584 + Lx7 LINE L1 5957 7692 -4 4 879 297 341 122 0 chrX 38542931 38543054 -128107242 - MIR SINE MIR -124 138 1 4 879 657 317 73 18 chrX 38545161 38545835 -128104461 + Lx4B LINE L1 2895 3605 -2275 4 879 21 36 0 0 chrX 38545850 38545878 -128104418 + AT_rich Low_complexity Low_complexity 1 28 0 5 879 412 286 85 25 chrX 38546028 38546229 -128104067 - Lx9 LINE L1 -207 7437 7225 5 879 570 98 0 0 chrX 38546338 38546420 -128103876 + (GAAA)n Simple_repeat Simple_repeat 1 82 0 5 879 472 281 102 0 chrX 38546440 38546636 -128103660 + Lx4B LINE L1 3675 3890 -1990 4 879 792 56 0 0 chrX 38546649 38546756 -128103540 - L1Md_F2 LINE L1 -513 6069 5963 5 879 10797 73 4 4 chrX 38546764 38548956 -128101340 - L1Md_F2 LINE L1 -4 6578 4386 5 879 3558 70 6 18 chrX 38548956 38549447 -128100849 + L1Md_F2 LINE L1 6084 6568 -14 5 879 1900 101 0 42 chrX 38549521 38549809 -128100487 - RLTR8 LTR ERVK -89 276 1 5 879 237 222 0 43 chrX 38549897 38550038 -128100258 + CT-rich Low_complexity Low_complexity 3 137 0 5 879 4137 61 19 0 chrX 38550051 38550577 -128099719 - L1Md_F2 LINE L1 -12 6570 6035 5 879 30 0 0 0 chrX 38550662 38550692 -128099604 + AT_rich Low_complexity Low_complexity 1 30 0 5 879 3843 73 2 0 chrX 38550893 38551383 -128098913 - L1_Mus1 LINE L1 0 6567 6077 6 879 2820 70 0 0 chrX 38551384 38551868 -128098428 + L1_Mus1 LINE L1 5469 5952 -615 6 879 686 266 55 29 chrX 38551938 38552285 -128098011 + Lx4B LINE L1 4039 4392 -1751 4 879 820 205 6 30 chrX 38552292 38552458 -128097838 - MTD LTR MaLR -6 413 252 6 879 4473 159 28 27 chrX 38552814 38553427 -128096869 - L1_Mur2 LINE L1 -645 5232 4632 6 879 198 0 0 0 chrX 38553427 38553449 -128096847 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 6 879 4473 159 28 27 chrX 38553449 38553749 -128096547 - L1_Mur2 LINE L1 -1246 4631 4318 6 879 6503 164 38 55 chrX 38553748 38555594 -128094702 + Lx4B LINE L1 5227 7041 -17 4 879 1003 315 14 37 chrX 38555625 38555982 -128094314 + Lx9 LINE L1 6428 6928 -716 6 879 1145 266 54 59 chrX 38555982 38556354 -128093942 + ORR1D2 LTR MaLR 1 370 0 6 879 1175 333 23 27 chrX 38556354 38556555 -128093741 + Lx8 LINE L1 6789 6984 -489 6 879 416 330 5 42 chrX 38556554 38556744 -128093552 - Lx9 LINE L1 -354 7290 7108 6 879 897 298 84 30 chrX 38557248 38557580 -128092716 + MLT1A0 LTR MaLR 10 359 -6 6 879 358 227 44 22 chrX 38558188 38558277 -128092019 + MTEb LTR MaLR 15 105 -274 6 879 2798 199 168 16 chrX 38558277 38558975 -128091321 + RLTR40 LTR ERVK 1 804 -13 7 879 816 297 62 8 chrX 38558985 38559243 -128091053 + MTEb LTR MaLR 108 379 0 6 879 654 93 0 0 chrX 38559465 38559573 -128090723 + (TAGA)n Simple_repeat Simple_repeat 1 108 0 7 879 1875 66 4 0 chrX 38561173 38561414 -128088882 - L1_Mus1 LINE L1 -719 5848 5607 7 879 5796 59 9 1 chrX 38561414 38562158 -128088138 + L1_Mus1 LINE L1 5818 6567 0 7 879 261 0 0 0 chrX 38562186 38562215 -128088081 + (A)n Simple_repeat Simple_repeat 1 29 0 7 879 488 247 6 133 chrX 38562346 38562519 -128087777 - MLT2B4 LTR ERVL -404 152 2 7 879 211 52 102 17 chrX 38564781 38564840 -128085456 + (TA)n Simple_repeat Simple_repeat 2 65 0 7 879 1219 154 109 0 chrX 38565000 38565201 -128085095 + URR1B DNA MER1_type 3 225 0 7 879 1165 219 98 28 chrX 38568389 38568540 -128081756 - Lx9 LINE L1 0 7644 7477 7 879 423 0 0 0 chrX 38568540 38568587 -128081709 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 879 1165 219 98 28 chrX 38568587 38568792 -128081504 - Lx9 LINE L1 -168 7476 7263 7 879 314 359 19 13 chrX 38569701 38569859 -128080437 - MIRb SINE MIR -8 260 102 7 879 681 138 0 0 chrX 38570535 38570680 -128079616 + (TC)n Simple_repeat Simple_repeat 2 146 0 8 879 180 0 0 0 chrX 38570680 38570700 -128079596 + (CA)n Simple_repeat Simple_repeat 1 20 0 8 879 1695 246 95 29 chrX 38572304 38572927 -128077369 + Lx9 LINE L1 1800 2463 -3384 8 879 3542 246 35 18 chrX 38572897 38574101 -128076195 + Lx9 LINE L1 4796 6053 -1591 8 879 1419 145 4 4 chrX 38574254 38574482 -128075814 + RMER6A LTR ERVK 1 228 -528 8 879 3310 107 51 6 chrX 38574482 38575314 -128074982 + L1_Mur2 LINE L1 733 1608 -4269 8 879 8500 181 71 9 chrX 38575303 38575820 -128074476 + L1_Mur2 LINE L1 3735 4311 -1566 8 879 189 0 0 0 chrX 38575820 38575841 -128074455 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 879 8500 181 71 9 chrX 38575841 38577157 -128073139 + L1_Mur2 LINE L1 4312 5682 -195 8 879 241 214 0 0 chrX 38577225 38577267 -128073029 - L1Md_A LINE L1 -6400 324 283 8 879 5575 23 6 13 chrX 38577267 38577941 -128072355 + L1Md_F3 LINE L1 5902 6570 -14 8 879 1018 87 13 0 chrX 38577996 38578146 -128072150 - L1_Mus1 LINE L1 -1 6566 6415 8 879 306 0 0 0 chrX 38578444 38578478 -128071818 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 9 879 934 135 0 0 chrX 38578480 38578621 -128071675 - B1_Mus1 SINE Alu -6 142 2 9 879 430 305 54 78 chrX 38578621 38578647 -128071649 - B4 SINE B4 -72 220 58 9 879 425 333 98 0 chrX 38578686 38578818 -128071478 + RSINE1 SINE B4 5 149 -16 9 879 26 30 0 0 chrX 38578860 38578893 -128071403 + AT_rich Low_complexity Low_complexity 1 33 0 9 879 234 343 30 0 chrX 38578934 38579033 -128071263 - L2 LINE L2 -1496 1923 1822 9 879 593 56 0 0 chrX 38579056 38579128 -128071168 + tRNA-Gly-GGA tRNA tRNA 1 72 -3 9 879 213 306 40 10 chrX 38579155 38579254 -128071042 - L2 LINE L2 -1612 1807 1706 9 879 3221 74 25 0 chrX 38579631 38580065 -128070231 + L1_Mus1 LINE L1 6123 6567 0 9 879 220 288 34 91 chrX 38580357 38580445 -128069851 - ID_B1 SINE B4 -48 176 94 9 879 21 0 0 0 chrX 38580465 38580486 -128069810 + AT_rich Low_complexity Low_complexity 1 21 0 9 879 25 65 0 0 chrX 38581398 38581444 -128068852 + AT_rich Low_complexity Low_complexity 1 46 0 1 879 405 364 0 0 chrX 38581703 38581813 -128068483 - RSINE1 SINE B4 -22 143 34 1 879 26 30 0 0 chrX 38582321 38582354 -128067942 + AT_rich Low_complexity Low_complexity 1 33 0 1 879 684 379 70 22 chrX 38582415 38582771 -128067525 - LTR33 LTR ERVL -2 513 141 1 879 211 281 100 64 chrX 38583081 38583191 -128067105 + MER5B DNA MER1_type 63 176 -2 1 879 186 275 0 0 chrX 38583225 38583265 -128067031 + MIRm SINE MIR 98 137 -139 1 879 385 250 0 12 chrX 38583532 38583617 -128066679 - Lx8 LINE L1 -586 6887 6804 1 879 6335 77 1 5 chrX 38583832 38584930 -128065366 + L1VL2 LINE L1 173 1264 -2351 1 879 35332 35 1 0 chrX 38584925 38590685 -128059611 + L1Md_T LINE L1 1 5589 -297 1 879 8973 6 0 0 chrX 38590685 38591681 -128058615 + L1Md_T LINE L1 5590 6585 0 1 879 385 212 55 100 chrX 38592903 38593013 -128057283 + PB1D9 SINE Alu 10 114 -6 1 879 478 186 82 0 chrX 38593640 38593737 -128056559 - B1_Mus1 SINE Alu -41 107 3 1 879 738 141 0 0 chrX 38594207 38594335 -128055961 + (CA)n Simple_repeat Simple_repeat 2 129 0 1 879 1523 175 142 47 chrX 38595004 38595541 -128054755 + RMER6C LTR ERVK 1 690 0 1 879 23 86 0 0 chrX 38595691 38595749 -128054547 + AT_rich Low_complexity Low_complexity 1 58 0 1 879 651 346 44 11 chrX 38595978 38596250 -128054046 - Lx8 LINE L1 -56 7417 7137 1 879 611 308 87 0 chrX 38596458 38596653 -128053643 + MIR SINE MIR 41 252 -10 1 879 975 331 13 54 chrX 38596833 38597206 -128053090 - MLT1A0 LTR MaLR 0 365 8 1 879 185 303 15 15 chrX 38597371 38597438 -128052858 + L2c LINE L2 3313 3379 -8 1 879 247 373 74 55 chrX 38597475 38597787 -128052509 - ORR1C2 LTR MaLR -4 380 63 1 879 1481 249 22 28 chrX 38597965 38598061 -128052235 + MTD LTR MaLR 43 132 -287 1 879 3315 48 0 0 chrX 38598061 38598457 -128051839 - MTA_Mm LTR MaLR 0 396 1 1 879 1481 249 22 28 chrX 38598457 38598723 -128051573 + MTD LTR MaLR 133 402 -17 1 879 3260 163 31 19 chrX 38598719 38599356 -128050940 + RMER6A LTR ERVK 112 756 0 1 879 769 190 7 7 chrX 38599356 38599499 -128050797 + Lx7 LINE L1 7074 7216 -480 1 879 10759 55 2 1 chrX 38599498 38600850 -128049446 + L1Md_F2 LINE L1 4233 5586 -297 1 879 7914 50 9 1 chrX 38600850 38601837 -128048459 + L1Md_F2 LINE L1 5587 6581 -1 1 879 686 235 44 179 chrX 38601837 38602200 -128048096 + Lx7 LINE L1 7209 7522 -174 1 879 2997 194 46 23 chrX 38602204 38603079 -128047217 + Lx4B LINE L1 6064 7000 0 1 879 256 262 0 0 chrX 38603144 38603205 -128047091 + Lx9 LINE L1 7215 7275 -369 1 879 375 251 67 77 chrX 38603226 38603420 -128046876 - Lx6 LINE L1 -43 7417 7226 1 879 415 312 70 37 chrX 38603404 38603536 -128046760 + Lx9 LINE L1 7316 7444 -200 1 879 2239 76 132 11 chrX 38603536 38603884 -128046412 + RLTR10 LTR ERVK 1 390 0 1 879 415 312 70 37 chrX 38603884 38604050 -128046246 + Lx9 LINE L1 7445 7624 -20 1 879 461 274 78 96 chrX 38604105 38604323 -128045973 + MTE2a LTR MaLR 166 379 0 1 879 21 36 0 0 chrX 38604453 38604481 -128045815 + AT_rich Low_complexity Low_complexity 1 28 0 1 879 25 31 0 0 chrX 38604989 38605021 -128045275 + AT_rich Low_complexity Low_complexity 1 32 0 1 879 531 315 30 8 chrX 38605029 38605160 -128045136 - RSINE1 SINE B4 -28 137 4 1 879 251 297 47 56 chrX 38605259 38605366 -128044930 - MIRc SINE MIR -147 121 16 1 879 1487 292 79 47 chrX 38606403 38607275 -128043021 - Lx8 LINE L1 -1560 5913 4968 1 879 446 234 81 59 chrX 38607288 38607510 -128042786 - L1M2 LINE L1 -1931 4209 3983 1 879 1297 163 15 58 chrX 38607510 38607771 -128042525 + ORR1A4 LTR MaLR 1 250 -79 1 879 2208 113 3 0 chrX 38607771 38608089 -128042207 + ORR1A2 LTR MaLR 1 319 -8 1 879 508 118 0 0 chrX 38608093 38608169 -128042127 + ORR1A4 LTR MaLR 246 321 -8 1 879 799 260 22 29 chrX 38608229 38608506 -128041790 - L1M2 LINE L1 -2273 3870 3596 1 879 21 89 0 0 chrX 38608535 38608591 -128041705 + AT_rich Low_complexity Low_complexity 1 56 0 1 879 22 0 0 0 chrX 38608835 38608857 -128041439 + AT_rich Low_complexity Low_complexity 1 22 0 1 879 925 147 76 1 chrX 38609507 38609682 -128040614 + Lx LINE L1 6086 6245 -409 1 879 255 31 0 0 chrX 38609688 38609720 -128040576 + (T)n Simple_repeat Simple_repeat 1 32 0 1 879 1137 62 14 0 chrX 38609723 38609868 -128040428 - B1_Mus2 SINE Alu 0 147 1 1 879 2508 158 10 0 chrX 38609868 38610274 -128040022 + Lx LINE L1 6243 6652 -2 1 879 2639 78 8 3 chrX 38610312 38610695 -128039601 - L1_Mur2 LINE L1 -2147 3730 3346 1 879 2807 109 33 16 chrX 38610665 38611114 -128039182 - L1_Mur2 LINE L1 -2979 2898 2442 1 879 1291 226 73 68 chrX 38611134 38611309 -128038987 - RLTR40 LTR ERVK -191 626 431 1 879 3904 129 49 3 chrX 38611309 38611944 -128038352 - Lx4A LINE L1 -3 7055 6392 1 879 1273 226 73 68 chrX 38611944 38612195 -128038101 - RLTR40 LTR ERVK -387 430 198 1 879 312 48 0 0 chrX 38612195 38612237 -128038059 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 879 947 198 96 16 chrX 38612237 38612595 -128037701 - Lx4B LINE L1 -8 7050 6590 1 879 643 183 120 32 chrX 38612596 38612754 -128037542 - RLTR40 LTR ERVK -645 172 1 1 879 1252 247 72 11 chrX 38613525 38613873 -128036423 - Lx9 LINE L1 -878 6766 6398 1 879 486 0 0 0 chrX 38613876 38613930 -128036366 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 879 408 40 0 0 chrX 38613930 38613979 -128036317 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 879 1718 231 63 10 chrX 38614037 38614435 -128035861 + MTD LTR MaLR 1 419 0 1 879 27 81 0 0 chrX 38614623 38614685 -128035611 + AT_rich Low_complexity Low_complexity 1 62 0 1 879 261 0 0 0 chrX 38614935 38614964 -128035332 + (TTTTA)n Simple_repeat Simple_repeat 5 33 0 1 879 628 202 70 0 chrX 38615000 38615114 -128035182 - B3 SINE B2 -93 123 2 1 879 190 321 0 18 chrX 38615337 38615394 -128034902 + MIR SINE MIR 40 95 -113 1 879 222 143 0 0 chrX 38615713 38615762 -128034534 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 879 201 143 0 0 chrX 38615762 38615797 -128034499 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 879 270 0 0 0 chrX 38616383 38616413 -128033883 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 879 546 181 0 0 chrX 38616814 38616919 -128033377 + (TG)n Simple_repeat Simple_repeat 2 106 0 1 879 610 281 0 7 chrX 38617970 38618110 -128032186 - ID_B1 SINE B4 -6 218 80 1 879 281 343 29 15 chrX 38618383 38618519 -128031777 + MER5B DNA MER1_type 22 159 -19 1 879 462 269 90 32 chrX 38618686 38618874 -128031422 + MamRep4096 DNA hAT? 121 319 -107 1 879 3045 73 5 2 chrX 38621166 38621565 -128028731 + MTB LTR MaLR 1 400 0 1 879 227 258 65 93 chrX 38622341 38622448 -128027848 - MIR SINE MIR -55 153 50 1 879 32924 80 10 2 chrX 38622696 38628897 -128021399 - L1Md_F2 LINE L1 -19 6563 311 1 879 261 368 41 71 chrX 38629168 38629437 -128020859 - MIRb SINE MIR 0 268 8 1 879 288 305 0 69 chrX 38629576 38629678 -128020618 - MIRb SINE MIR -48 220 126 1 879 266 330 81 81 chrX 38630670 38630967 -128019329 - L2c LINE L2 -4 3383 3087 1 879 999 238 31 41 chrX 38631093 38631441 -128018855 + RLTR20D LTR ERVK 1 444 -90 1 879 15343 68 2 1 chrX 38631495 38634305 -128015991 - L1Md_F2 LINE L1 -3 6579 3767 1 879 3369 82 2 17 chrX 38634299 38634634 -128015662 - L1Md_F2 LINE L1 -4152 1731 1396 1 879 3120 47 10 0 chrX 38634634 38635018 -128015278 + RLTR10 LTR ERVK 1 388 -2 1 879 3369 112 1 9 chrX 38635018 38635384 -128014912 - L1Md_F2 LINE L1 -4488 1395 1038 1 879 1331 213 8 17 chrX 38635384 38635735 -128014561 - L1Md_F2 LINE L1 -5936 788 220 1 879 400 238 18 73 chrX 38635735 38635844 -128014452 + RLTR20D LTR ERVK 432 539 -12 1 879 275 231 103 0 chrX 38636536 38636614 -128013682 - MER5A DNA MER1_type -44 145 60 1 879 38 22 0 0 chrX 38637943 38637988 -128012308 + AT_rich Low_complexity Low_complexity 1 45 0 1 879 249 60 0 0 chrX 38637992 38638042 -128012254 + L1_Mus2 LINE L1 6527 6579 -3 1 879 815 323 30 49 chrX 38638736 38639101 -128011195 + MT2A LTR ERVL 71 428 -105 1 879 246 95 0 0 chrX 38639246 38639288 -128011008 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 879 216 86 0 0 chrX 38639958 38639993 -128010303 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 879 226 305 16 33 chrX 38640573 38640634 -128009662 - tRNA-Ala-GCY_ tRNA tRNA -8 67 8 1 879 312 391 173 45 chrX 38642601 38643076 -128007220 + MLT1H LTR MaLR 1 536 -13 1 879 1739 165 62 89 chrX 38643507 38643912 -128006384 + ORR1B1 LTR MaLR 1 394 0 1 879 231 243 190 89 chrX 38643919 38644077 -128006219 - RMER1C Other Other -31 1311 1138 1 879 1143 330 110 18 chrX 38643942 38644612 -128005684 - Lx8 LINE L1 -40 7433 6702 1 879 1269 74 80 0 chrX 38644911 38645087 -128005209 - B2_Mm2 SINE B2 -3 192 3 1 879 1081 157 0 16 chrX 38645927 38646115 -128004181 - RMER6C LTR ERVK 0 690 506 1 879 381 141 0 0 chrX 38646128 38646199 -128004097 + (AACTG)n Simple_repeat Simple_repeat 3 73 0 1 879 474 18 0 0 chrX 38646226 38646281 -128004015 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 879 225 0 0 0 chrX 38646281 38646305 -128003991 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 879 432 55 0 0 chrX 38646457 38646512 -128003784 + (T)n Simple_repeat Simple_repeat 1 55 0 1 879 7190 68 23 1 chrX 38648325 38649637 -128000659 - L1Md_F2 LINE L1 0 6582 5251 1 879 348 83 0 0 chrX 38649637 38649685 -128000611 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 879 5123 82 26 0 chrX 38649685 38649797 -128000499 - L1Md_F2 LINE L1 -633 5250 5124 1 879 1904 46 0 8 chrX 38649816 38650058 -128000238 - L1Md_F3 LINE L1 -14 6570 6331 1 879 6296 36 3 0 chrX 38650058 38650895 -127999401 + L1Md_F3 LINE L1 5531 6370 -212 1 879 3086 84 0 4 chrX 38650890 38651342 -127998954 - L1Md_F2 LINE L1 -747 5136 4687 1 879 694 264 45 16 chrX 38651520 38651763 -127998533 - L1MA5 LINE L1 -275 6025 5776 1 879 941 284 59 26 chrX 38652337 38652832 -127997464 - L1ME3A LINE L1 -8 6165 5655 1 879 277 318 73 84 chrX 38652882 38653225 -127997071 - L1MEg LINE L1 -5492 592 254 1 879 352 273 45 0 chrX 38653381 38653513 -127996783 - L1MB5 LINE L1 -6 6168 6031 1 879 231 255 0 0 chrX 38653820 38653867 -127996429 - RMER15 LTR ERVL -105 470 424 1 879 776 311 111 19 chrX 38653885 38654256 -127996040 - Lx8 LINE L1 -252 7221 6817 1 879 7014 52 14 53 chrX 38655236 38656323 -127993973 - L1_Mus2 LINE L1 0 6566 5524 1 879 243 188 78 0 chrX 38656439 38656503 -127993793 - L1M2 LINE L1 -3330 2813 2745 1 879 21 82 0 0 chrX 38656794 38656843 -127993453 + AT_rich Low_complexity Low_complexity 1 49 0 1 879 353 263 0 0 chrX 38657514 38657590 -127992706 + PB1D10 SINE Alu 28 103 -14 2 879 2870 100 92 2 chrX 38657745 38658277 -127992019 - MusHAL1 LINE L1 -1789 923 344 2 879 36307 30 0 0 chrX 38658270 38664671 -127985625 - L1Md_T LINE L1 -1 6584 86 2 879 404 349 77 51 chrX 38665607 38666036 -127984260 + L2c LINE L2 2947 3386 -1 2 109 3742 112 34 22 chrX 38666137 38666730 -127983566 + Lx2A1 LINE L1 6409 7008 0 2 880 205 151 38 0 chrX 38666992 38667045 -127983251 + GA-rich Low_complexity Low_complexity 2 56 0 2 880 228 67 0 0 chrX 38668635 38668665 -127981631 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2 880 354 379 6 44 chrX 38668781 38668963 -127981333 + MIRc SINE MIR 19 193 -75 2 880 635 287 124 30 chrX 38669085 38669351 -127980945 + B4A SINE B4 2 292 0 2 880 214 388 0 0 chrX 38669796 38669876 -127980420 - ID4 SINE ID -1 82 3 2 880 747 219 64 13 chrX 38670535 38670692 -127979604 + B3 SINE B2 6 170 -46 2 880 26 0 0 0 chrX 38673766 38673792 -127976504 + AT_rich Low_complexity Low_complexity 1 26 0 2 880 557 55 0 0 chrX 38673949 38674022 -127976274 + BC1_Mm scRNA scRNA 1 73 -79 2 880 750 101 0 0 chrX 38674022 38674131 -127976165 + (GAAA)n Simple_repeat Simple_repeat 4 112 0 2 880 3061 58 8 0 chrX 38674650 38675043 -127975253 - MTA_Mm LTR MaLR 0 396 1 2 880 252 258 0 0 chrX 38675163 38675225 -127975071 + ID4_ SINE ID 6 67 -16 2 880 281 26 0 26 chrX 38675231 38675270 -127975026 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 2 880 6444 189 44 44 chrX 38675465 38675491 -127974805 + Lx6 LINE L1 4397 4422 -1458 2 880 189 0 0 0 chrX 38675491 38675512 -127974784 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2 880 8375 189 44 44 chrX 38675512 38676841 -127973455 + Lx6 LINE L1 4423 5776 -1684 2 880 4344 131 55 0 chrX 38676841 38677519 -127972777 + Lx3B LINE L1 6255 6969 -4 2 880 8375 228 27 33 chrX 38677519 38679187 -127971109 + Lx6 LINE L1 5777 7447 -13 2 880 405 0 0 0 chrX 38679799 38679844 -127970452 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 880 281 271 23 12 chrX 38680642 38680728 -127969568 + CT-rich Low_complexity Low_complexity 2 88 0 2 880 2529 226 16 25 chrX 38681074 38681642 -127968654 + Lx5 LINE L1 6488 7050 0 2 880 24 32 0 0 chrX 38681783 38681814 -127968482 + AT_rich Low_complexity Low_complexity 1 31 0 2 880 6123 20 0 0 chrX 38681917 38682835 -127967461 - L1Md_T LINE L1 -485 6097 5180 2 880 2996 36 0 0 chrX 38682835 38683195 -127967101 + L1Md_T LINE L1 6222 6581 -1 2 880 291 318 0 23 chrX 38683195 38683282 -127967014 - MTD LTR MaLR -48 371 287 2 880 1265 51 0 0 chrX 38684028 38684185 -127966111 + L1_Mus2 LINE L1 6407 6563 -3 2 880 238 161 31 31 chrX 38684195 38684259 -127966037 + (TAAA)n Simple_repeat Simple_repeat 2 65 0 2 880 215 341 56 70 chrX 38684828 38684970 -127965326 + MIR3 SINE MIR 37 176 -32 2 880 800 266 135 25 chrX 38686349 38686712 -127963584 - Lx9 LINE L1 0 7644 7242 2 880 1060 105 0 7 chrX 38686738 38686882 -127963414 + B1_Mus1 SINE Alu 1 143 -5 2 880 1294 38 0 0 chrX 38686891 38687051 -127963245 + B2_Mm1a SINE B2 1 160 -33 2 880 207 0 0 0 chrX 38687051 38687074 -127963222 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 2 880 22 0 0 0 chrX 38687075 38687097 -127963199 + AT_rich Low_complexity Low_complexity 1 22 0 2 880 372 301 0 47 chrX 38687097 38687226 -127963070 - Lx9 LINE L1 -431 7213 7091 2 880 4001 54 2 0 chrX 38687207 38687704 -127962592 + L1Md_F2 LINE L1 6052 6549 -33 2 880 1071 84 150 0 chrX 38687704 38687850 -127962446 + B2_Mm1t SINE B2 2 160 -33 2 880 459 0 0 0 chrX 38687850 38687901 -127962395 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 2 880 1071 84 150 0 chrX 38687901 38687921 -127962375 + B2_Mm1t SINE B2 161 191 -2 2 880 21 36 0 0 chrX 38688487 38688515 -127961781 + AT_rich Low_complexity Low_complexity 1 28 0 2 880 2898 164 80 92 chrX 38688636 38689361 -127960935 - RMER6D LTR ERVK -4 716 1 2 880 725 346 24 28 chrX 38689386 38689614 -127960682 + B4 SINE B4 43 269 -23 2 880 207 0 0 0 chrX 38689614 38689637 -127960659 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 880 725 346 24 28 chrX 38689637 38689658 -127960638 + B4 SINE B4 270 290 -2 2 880 267 146 336 28 chrX 38689835 38689942 -127960354 - B2_Mm2 SINE B2 -9 186 47 2 880 1088 136 23 0 chrX 38690008 38690184 -127960112 - B2_Mm2 SINE B2 -14 181 2 2 880 216 0 0 0 chrX 38690199 38690223 -127960073 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 880 314 257 89 27 chrX 38690654 38690766 -127959530 - MTC LTR MaLR -2 419 301 2 880 3520 152 2 18 chrX 38690777 38691398 -127958898 - Lx4B LINE L1 -731 6327 5720 2 880 445 270 8 8 chrX 38691417 38691544 -127958752 - RSINE1 SINE B4 -35 130 4 2 880 5995 54 1 1 chrX 38691638 38692384 -127957912 - L1Md_F2 LINE L1 -1 6581 5836 2 880 4556 30 0 0 chrX 38692384 38692918 -127957378 + L1Md_F2 LINE L1 5286 5819 -64 2 880 5457 166 25 5 chrX 38692916 38693891 -127956405 - Lx4B LINE L1 -131 5746 4753 2 880 3744 144 55 18 chrX 38693891 38694286 -127956010 + Lx4B LINE L1 4208 4627 -1250 2 880 279 0 0 0 chrX 38694286 38694317 -127955979 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 880 3744 144 55 18 chrX 38694317 38694606 -127955690 + L1_Mur2 LINE L1 4628 4918 -959 2 880 835 344 67 39 chrX 38694649 38695039 -127955257 - MLT2B3 LTR ERVL -142 412 12 2 880 984 248 201 16 chrX 38695138 38695441 -127954855 - MTEa LTR MaLR -5 374 16 2 880 508 275 149 26 chrX 38695616 38695810 -127954486 - ID_B1 SINE B4 -6 218 1 2 880 313 260 0 13 chrX 38695892 38695970 -127954326 - MLT1C LTR MaLR -390 77 1 2 880 21 57 0 0 chrX 38696061 38696096 -127954200 + AT_rich Low_complexity Low_complexity 1 35 0 2 880 243 342 173 6 chrX 38696417 38696579 -127953717 - MIRb SINE MIR -39 229 41 2 880 463 273 65 32 chrX 38698299 38698454 -127951842 + MIRb SINE MIR 66 225 -43 2 880 414 321 178 17 chrX 38698970 38699211 -127951085 - MLT1H LTR MaLR 0 549 270 2 880 780 248 0 0 chrX 38699960 38700117 -127950179 - Lx9 LINE L1 -418 7226 7070 2 880 1453 209 79 0 chrX 38700116 38700494 -127949802 + Lx9 LINE L1 7236 7643 -1 2 880 411 352 124 81 chrX 38703590 38704391 -127945905 - L2 LINE L2 -955 2464 1630 2 880 502 350 92 60 chrX 38704691 38705104 -127945192 - MLT1D LTR MaLR -60 445 20 2 880 1100 88 30 25 chrX 38705116 38705315 -127944981 - L1_Mus3 LINE L1 -6 6632 6433 2 880 3237 91 24 0 chrX 38705315 38705778 -127944518 + MusHAL1 LINE L1 1012 1485 -1227 2 880 6020 223 105 18 chrX 38705922 38707934 -127942362 + Lx9 LINE L1 5400 7636 -8 2 880 22 0 0 0 chrX 38708174 38708196 -127942100 + AT_rich Low_complexity Low_complexity 1 22 0 2 880 24 96 0 0 chrX 38708425 38708498 -127941798 + AT_rich Low_complexity Low_complexity 1 73 0 2 880 1662 317 31 12 chrX 38709070 38709631 -127940665 + Lx8 LINE L1 6443 7046 -598 2 880 1342 188 58 58 chrX 38709631 38709942 -127940354 - ORR1C2 LTR MaLR 0 384 74 2 880 974 308 75 19 chrX 38710031 38710099 -127940197 - L1MB7 LINE L1 -53 6131 6051 2 880 1343 67 6 0 chrX 38710099 38710310 -127939986 - L1Md_F2 LINE L1 0 6582 6384 2 880 974 308 75 19 chrX 38710310 38710825 -127939471 - L1MB7 LINE L1 -134 6050 5515 2 880 287 196 18 0 chrX 38711156 38711219 -127939077 - MIRb SINE MIR -83 179 112 2 880 235 317 99 47 chrX 38711928 38712100 -127938196 + RLTR14 LTR ERV1 202 382 0 2 880 22 0 0 0 chrX 38712284 38712306 -127937990 + AT_rich Low_complexity Low_complexity 1 22 0 2 880 250 341 0 24 chrX 38712362 38712446 -127937850 - ID4_ SINE ID -1 82 1 2 880 767 35 0 66 chrX 38712823 38712945 -127937351 + L1Md_A LINE L1 6468 6581 -1 2 880 275 378 71 24 chrX 38714539 38714707 -127935589 + MamGypLTR1d LTR Gypsy 404 579 -234 2 880 243 245 0 0 chrX 38715202 38715255 -127935041 + MER5B DNA MER1_type 125 177 -1 2 880 7676 68 4 15 chrX 38715270 38716616 -127933680 - L1_Mus2 LINE L1 0 6566 5235 2 880 4248 142 28 9 chrX 38716683 38717425 -127932871 + RMER6A LTR ERVK 1 756 0 2 880 310 276 66 66 chrX 38717537 38717673 -127932623 + B1F SINE Alu 14 149 0 2 880 227 225 0 0 chrX 38718975 38719015 -127931281 + Lx8 LINE L1 7190 7229 -244 2 880 337 333 152 31 chrX 38719219 38719476 -127930820 + B4A SINE B4 1 288 -4 2 880 558 292 141 6 chrX 38719638 38719993 -127930303 - L1MA7 LINE L1 -64 6227 5825 2 880 548 231 51 13 chrX 38720109 38720267 -127930029 - L1MA7 LINE L1 -459 5832 5669 2 880 252 279 65 10 chrX 38720277 38720476 -127929820 + L1M2 LINE L1 1809 2018 -4831 2 880 364 204 2 0 chrX 38720503 38720583 -127929713 - Lx5 LINE L1 -560 6437 6346 2 880 692 413 56 50 chrX 38720752 38721451 -127928845 - MER21B LTR ERV1 -142 721 19 2 880 459 304 64 31 chrX 38721535 38721861 -127928435 + L1M2 LINE L1 5251 5587 -1255 2 880 1652 122 15 11 chrX 38722050 38722316 -127927980 + Lx LINE L1 6387 6653 -1 2 880 302 327 9 9 chrX 38722516 38722621 -127927675 + Lx8 LINE L1 7195 7299 -174 2 880 2960 25 6 14 chrX 38722888 38723251 -127927045 - L1Md_F3 LINE L1 -1 6583 6224 2 880 2595 242 157 8 chrX 38723336 38724380 -127925916 + Lx6 LINE L1 6253 7452 -8 2 880 1109 102 7 0 chrX 38724808 38724955 -127925341 - B1_Mus1 SINE Alu 0 148 1 2 880 228 400 16 24 chrX 38725219 38725342 -127924954 - MIR SINE MIR -126 136 15 2 880 22 35 0 0 chrX 38725828 38725857 -127924439 + AT_rich Low_complexity Low_complexity 1 29 0 2 880 243 348 21 36 chrX 38725926 38726066 -127924230 + B1F SINE Alu 3 140 -9 2 880 1002 116 21 5 chrX 38726169 38726359 -127923937 - Lx2A1 LINE L1 -1 7007 6815 2 880 311 265 113 42 chrX 38726579 38726721 -127923575 + L2 LINE L2 2332 2483 -936 2 880 5367 112 32 8 chrX 38726791 38727592 -127922704 + Lx LINE L1 5828 6648 -6 2 880 306 0 0 0 chrX 38727596 38727630 -127922666 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 880 523 208 38 0 chrX 38728791 38728897 -127921399 - B1_Mur1 SINE Alu -7 142 33 2 880 264 310 69 0 chrX 38729791 38729849 -127920447 + ID4 SINE ID 12 73 -10 2 880 695 315 19 38 chrX 38730096 38730360 -127919936 + B4A SINE B4 18 276 -16 2 880 764 189 6 25 chrX 38730550 38730707 -127919589 + Lx6 LINE L1 7303 7456 -4 3 880 477 0 0 0 chrX 38730874 38730927 -127919369 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 3 880 211 294 0 0 chrX 38731095 38731146 -127919150 + A-rich Low_complexity Low_complexity 3 53 0 3 880 278 224 52 136 chrX 38731226 38731381 -127918915 - L1MC1 LINE L1 -4 6515 6370 3 880 1042 237 32 35 chrX 38731352 38731723 -127918573 - L1MC1 LINE L1 -268 6240 5871 3 880 830 265 169 87 chrX 38731811 38732108 -127918188 - L1MC1 LINE L1 -2442 3879 3534 3 880 1132 109 5 66 chrX 38732108 38732305 -127917991 - B2_Mm2 SINE B2 -7 188 4 3 880 830 265 169 87 chrX 38732305 38733079 -127917217 - L1MC1 LINE L1 -2788 3533 2720 3 880 758 216 146 0 chrX 38733203 38733388 -127916908 - B3 SINE B2 -4 212 1 3 880 485 250 51 31 chrX 38733491 38733747 -127916549 - L1MC1 LINE L1 -4106 2402 2142 3 880 5237 147 81 20 chrX 38733751 38734736 -127915560 - Lx3C LINE L1 -5 6971 5927 3 880 894 99 28 0 chrX 38734736 38734877 -127915419 + Lx3C LINE L1 5780 5924 -1052 3 880 351 287 51 83 chrX 38734895 38735007 -127915289 - L1MC1 LINE L1 -4383 2125 2014 3 880 1571 158 50 36 chrX 38735007 38735309 -127914987 - Lx4A LINE L1 -2 7056 6751 3 880 351 287 51 83 chrX 38735309 38735667 -127914629 - L1MC1 LINE L1 -4495 2013 1670 3 880 288 269 107 30 chrX 38735719 38735953 -127914343 - L1MA6 LINE L1 -9 6291 6040 3 880 253 203 0 17 chrX 38736057 38736117 -127914179 - L1MA6 LINE L1 -388 5912 5854 3 880 349 307 51 0 chrX 38736109 38736285 -127914011 - L1MC1 LINE L1 -4857 1651 1467 3 880 318 182 0 60 chrX 38736372 38736489 -127913807 + CT-rich Low_complexity Low_complexity 5 114 0 3 880 1705 82 45 0 chrX 38736616 38736859 -127913437 - L1_Mus1 LINE L1 0 6567 6314 3 880 773 75 9 0 chrX 38736865 38736971 -127913325 + L1_Mus1 LINE L1 6123 6229 -338 3 880 1158 267 280 41 chrX 38736988 38737764 -127912532 - L1MC1 LINE L1 -5489 1019 59 3 880 310 309 21 35 chrX 38737784 38737925 -127912371 - L1MC1 LINE L1 -6362 146 8 3 880 291 310 23 130 chrX 38740538 38740753 -127909543 + MER121 Unknown Unknown 146 337 -75 3 880 23 0 0 0 chrX 38740820 38740843 -127909453 + AT_rich Low_complexity Low_complexity 1 23 0 3 880 463 165 42 76 chrX 38741038 38741156 -127909140 - RMER30 DNA MER1_type -11 191 78 3 880 265 279 35 88 chrX 38741735 38741849 -127908447 + MIRb SINE MIR 153 260 -8 3 880 28 0 0 0 chrX 38743193 38743221 -127907075 + AT_rich Low_complexity Low_complexity 1 28 0 3 880 999 91 74 57 chrX 38743663 38743838 -127906458 + B2_Mm2 SINE B2 4 181 -14 3 880 21 0 0 0 chrX 38743854 38743875 -127906421 + AT_rich Low_complexity Low_complexity 1 21 0 3 880 676 190 279 0 chrX 38743878 38744036 -127906260 + B3 SINE B2 3 204 -12 3 880 758 306 73 5 chrX 38744128 38744348 -127905948 + B4A SINE B4 56 290 -2 3 880 258 32 0 0 chrX 38744425 38744456 -127905840 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 880 369 0 0 0 chrX 38744456 38744496 -127905800 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 880 475 297 65 7 chrX 38744532 38744671 -127905625 - B1F SINE Alu 0 149 3 3 880 449 272 48 8 chrX 38745724 38745850 -127904446 + MER45A DNA Tip100 47 177 -1 3 880 503 232 0 101 chrX 38745954 38746112 -127904184 - B1F2 SINE Alu -5 144 3 3 880 331 283 36 45 chrX 38746559 38746694 -127903602 - MIRc SINE MIR -113 155 27 3 880 236 310 8 94 chrX 38746751 38746879 -127903417 - MER20 DNA MER1_type -19 200 84 3 880 222 176 0 0 chrX 38747063 38747114 -127903182 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 3 880 384 347 0 16 chrX 38747122 38747245 -127903051 - B1F2 SINE Alu -10 139 19 3 880 251 378 99 65 chrX 38747929 38748223 -127902073 - MLT1H LTR MaLR -146 403 100 3 880 218 268 0 17 chrX 38748954 38749021 -127901275 + MIRc SINE MIR 72 140 -128 3 880 213 204 0 0 chrX 38749360 38749404 -127900892 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 880 366 331 41 18 chrX 38749572 38749741 -127900555 + MLT1L LTR MaLR 435 607 -3 3 880 826 159 6 6 chrX 38750270 38750435 -127899861 + GA-rich Low_complexity Low_complexity 3 167 0 3 880 332 269 79 84 chrX 38750678 38750881 -127899415 + L2c LINE L2 3182 3383 -4 3 880 531 125 0 0 chrX 38751985 38752089 -127898207 + (TAGA)n Simple_repeat Simple_repeat 3 106 0 3 880 384 348 36 50 chrX 38752333 38752554 -127897742 - MIRb SINE MIR -11 257 40 3 880 189 0 0 0 chrX 38754132 38754153 -127896143 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3 880 947 119 0 6 chrX 38754184 38754361 -127895935 + (TC)n Simple_repeat Simple_repeat 1 176 0 3 880 336 104 45 0 chrX 38754478 38754545 -127895751 + (GA)n Simple_repeat Simple_repeat 1 70 0 3 880 252 77 0 0 chrX 38756855 38756894 -127893402 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 880 216 0 0 0 chrX 38759092 38759116 -127891180 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 3 880 202 200 0 0 chrX 38762800 38762835 -127887461 - MER5A DNA MER1_type -107 82 48 3 880 235 346 12 0 chrX 38764392 38764473 -127885823 + MER5A DNA MER1_type 26 107 -82 3 880 247 326 111 44 chrX 38765025 38765250 -127885046 - MIR SINE MIR -1 261 22 3 880 303 356 60 20 chrX 38766202 38766351 -127883945 - LTR82B Low_complexity ERVL -191 639 485 3 880 339 304 117 25 chrX 38766474 38766670 -127883626 - LTR82A LTR ERVL -648 224 11 3 880 327 327 32 45 chrX 38766739 38766893 -127883403 + MIR3 SINE MIR 19 170 -38 3 880 336 294 146 32 chrX 38767110 38767268 -127883028 + MIR SINE MIR 57 232 -30 3 880 576 40 0 0 chrX 38767747 38767822 -127882474 + (CAGAGA)n Simple_repeat Simple_repeat 2 76 0 3 880 319 123 12 12 chrX 38768075 38768157 -127882139 + (TTTTTG)n Simple_repeat Simple_repeat 3 84 0 3 880 440 295 101 45 chrX 38768728 38768927 -127881369 + MIRb SINE MIR 57 266 -2 3 880 295 222 151 11 chrX 38769981 38770094 -127880202 - MIR SINE MIR -140 136 4 3 880 265 288 55 0 chrX 38770389 38770462 -127879834 - MIR3 SINE MIR -49 159 83 3 880 266 299 15 30 chrX 38770758 38770889 -127879407 + BC1_Mm scRNA scRNA 3 131 -21 3 880 28 48 0 0 chrX 38770984 38771026 -127879270 + AT_rich Low_complexity Low_complexity 1 42 0 3 880 373 311 39 0 chrX 38771281 38771384 -127878912 + ID_B1 SINE B4 69 175 -49 3 880 520 287 0 0 chrX 38771301 38771402 -127878894 + PB1D10 SINE Alu 12 112 -5 3 880 601 286 147 26 chrX 38771408 38771614 -127878682 + Lx9 LINE L1 7196 7426 -218 3 880 2477 153 22 7 chrX 38771614 38772029 -127878267 - MTC LTR MaLR 0 421 1 3 880 601 286 147 26 chrX 38772029 38772209 -127878087 + Lx9 LINE L1 7427 7629 -15 3 880 316 330 56 77 chrX 38772326 38772422 -127877874 - MIRc SINE MIR -7 261 167 3 880 1664 65 0 0 chrX 38772422 38772636 -127877660 + L1_Mus2 LINE L1 6353 6566 0 3 880 316 330 56 77 chrX 38772636 38772772 -127877524 - MIRc SINE MIR -102 166 34 3 880 311 85 0 33 chrX 38772965 38773026 -127877270 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 3 880 198 103 0 0 chrX 38773026 38773055 -127877241 + (GGGAGA)n Simple_repeat Simple_repeat 1 29 0 3 880 477 0 0 0 chrX 38774020 38774073 -127876223 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 880 1005 130 0 0 chrX 38774764 38774926 -127875370 + (GAAA)n Simple_repeat Simple_repeat 2 163 0 3 880 216 0 0 0 chrX 38774936 38774960 -127875336 + (CAGG)n Simple_repeat Simple_repeat 2 25 0 3 880 326 315 76 15 chrX 38775357 38775489 -127874807 + B1F SINE Alu 2 141 -8 3 880 300 374 14 13 chrX 38775540 38775728 -127874568 + MIRb SINE MIR 44 238 -30 3 880 788 186 7 7 chrX 38775841 38775987 -127874309 - B1_Mur1 SINE Alu -2 147 2 3 880 225 0 0 0 chrX 38776594 38776619 -127873677 + (CG)n Simple_repeat Simple_repeat 1 25 0 3 880 270 0 0 0 chrX 38776619 38776648 -127873648 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 880 786 251 0 10 chrX 38776971 38777168 -127873128 - Lx9 LINE L1 -374 7270 7076 3 880 267 246 0 14 chrX 38777284 38777354 -127872942 - MTEb LTR MaLR 0 379 311 3 880 226 294 116 77 chrX 38777761 38777916 -127872380 - MIRb SINE MIR -85 183 23 3 880 388 285 45 26 chrX 38777931 38778086 -127872210 - Tigger15a DNA TcMar -26 689 532 3 880 278 271 14 0 chrX 38778531 38778601 -127871695 - MER97c DNA MER1_type? -1004 86 16 3 880 307 351 91 8 chrX 38779975 38780107 -127870189 - MIR SINE MIR -119 143 1 3 880 267 246 44 44 chrX 38780679 38780747 -127869549 - ID_B1 SINE B4 -4 220 153 3 880 245 221 22 55 chrX 38780747 38780769 -127869527 - PB1D9 SINE Alu -4 115 29 3 880 879 10 0 0 chrX 38780823 38780923 -127869373 + (GAA)n Simple_repeat Simple_repeat 2 101 0 3 880 266 351 65 19 chrX 38781888 38782042 -127868254 + MIRb SINE MIR 47 207 -61 3 880 26 30 0 0 chrX 38782563 38782596 -127867700 + AT_rich Low_complexity Low_complexity 1 33 0 3 880 280 306 20 20 chrX 38784394 38784544 -127865752 - Tigger14a DNA MER2_type -57 267 118 3 880 777 268 11 37 chrX 38784722 38784912 -127865384 + B3 SINE B2 1 185 -31 3 880 25 31 0 0 chrX 38784949 38784981 -127865315 + AT_rich Low_complexity Low_complexity 1 32 0 3 880 279 133 0 0 chrX 38785339 38785384 -127864912 + (TAA)n Simple_repeat Simple_repeat 3 47 0 3 880 195 204 20 39 chrX 38785422 38785473 -127864823 - MIRb SINE MIR -34 234 185 3 880 522 322 38 16 chrX 38785614 38785797 -127864499 - MIRb SINE MIR -15 253 67 3 880 312 232 50 74 chrX 38786215 38786336 -127863960 + MER5A1 DNA MER1_type 47 164 -2 3 880 255 254 30 0 chrX 38786466 38786533 -127863763 - MER103 DNA DNA -31 135 67 3 880 468 0 0 0 chrX 38789066 38789118 -127861178 + (A)n Simple_repeat Simple_repeat 1 52 0 3 880 494 219 50 14 chrX 38789857 38789996 -127860300 - Lx4B LINE L1 -8 7050 6907 3 880 315 0 0 0 chrX 38791154 38791189 -127859107 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 880 627 355 45 23 chrX 38791224 38791489 -127858807 + B4A SINE B4 18 288 -4 3 880 247 255 0 0 chrX 38791837 38791888 -127858408 - MamRep38 DNA hAT -141 154 104 3 880 627 268 10 59 chrX 38792843 38793045 -127857251 - B3A SINE B2 -6 192 1 3 880 248 304 118 11 chrX 38793284 38793377 -127856919 - MIR SINE MIR -14 248 146 3 880 586 298 15 48 chrX 38794069 38794327 -127855969 + Lx9 LINE L1 6815 7170 -474 3 880 561 308 89 36 chrX 38794359 38794696 -127855600 + Lx9 LINE L1 7058 7412 -232 3 880 375 121 0 0 chrX 38794696 38794754 -127855542 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 880 657 250 29 11 chrX 38795547 38795721 -127854575 - MER5B DNA MER1_type -1 177 1 4 880 205 250 0 0 chrX 38795721 38795761 -127854535 + L3 LINE CR1 4438 4477 -12 4 880 214 241 79 22 chrX 38796844 38796933 -127853363 - L3 LINE CR1 -3176 1313 1220 4 880 22 0 0 0 chrX 38797198 38797220 -127853076 + AT_rich Low_complexity Low_complexity 1 22 0 4 13 1089 212 10 5 chrX 38797220 38797428 -127852868 - B3 SINE B2 -6 210 2 4 881 261 0 0 0 chrX 38797752 38797781 -127852515 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 881 441 0 0 0 chrX 38797781 38797830 -127852466 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 881 193 372 22 37 chrX 38797933 38798067 -127852229 + L2b LINE L2 2950 3081 -345 4 881 273 361 106 29 chrX 38798284 38798492 -127851804 + MIRb SINE MIR 31 254 -14 4 881 199 315 0 0 chrX 38798522 38798576 -127851720 + L2b LINE L2 3321 3374 -1 4 881 622 289 89 50 chrX 38799214 38799494 -127850802 + B4 SINE B4 2 292 0 4 881 210 171 0 0 chrX 38799497 38799538 -127850758 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 881 258 311 0 0 chrX 38799717 38799791 -127850505 + (CAT)n Simple_repeat Simple_repeat 1 74 0 4 881 502 258 109 36 chrX 38800562 38800783 -127849513 - Lx8 LINE L1 -4 7469 7233 4 881 26 0 0 0 chrX 38800784 38800810 -127849486 + AT_rich Low_complexity Low_complexity 1 26 0 4 881 212 281 18 0 chrX 38801115 38801172 -127849124 + L2c LINE L2 3283 3340 -47 4 881 219 139 0 0 chrX 38801217 38801253 -127849043 + (TGGA)n Simple_repeat Simple_repeat 1 36 0 4 881 369 0 0 0 chrX 38802951 38802992 -127847304 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 881 237 283 30 80 chrX 38803595 38803695 -127846601 + MT2B2 LTR ERVL 152 246 -338 4 881 491 254 45 0 chrX 38803616 38803726 -127846570 + B1F SINE Alu 8 122 -27 4 881 1872 164 32 0 chrX 38803807 38804155 -127846141 - RLTR15 LTR ERVK 0 359 1 4 881 244 336 8 114 chrX 38804396 38804527 -127845769 + PB1D10 SINE Alu 1 117 0 4 881 234 274 50 124 chrX 38804886 38805007 -127845289 - L2c LINE L2 -1 3386 3275 4 881 466 270 82 10 chrX 38806045 38806251 -127844045 + L1MB3 LINE L1 5959 6179 -4 4 881 192 400 18 9 chrX 38806376 38806487 -127843809 + L2a LINE L2 3301 3412 -14 4 881 322 204 33 52 chrX 38806733 38806864 -127843432 + MIRb SINE MIR 43 167 -41 4 881 549 235 60 13 chrX 38811634 38811785 -127838511 - MER112 DNA MER1_type -102 159 2 4 881 255 61 0 0 chrX 38811895 38811928 -127838368 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 881 408 156 0 0 chrX 38811928 38812018 -127838278 + GA-rich Low_complexity Low_complexity 1 90 0 4 881 447 292 69 0 chrX 38812868 38813012 -127837284 + MER3 DNA MER1_type 14 167 -42 4 881 435 263 5 178 chrX 38813021 38813034 -127837262 - RSINE1 SINE B4 -1 164 153 4 881 525 32 0 0 chrX 38813034 38813097 -127837199 + (GA)n Simple_repeat Simple_repeat 2 64 0 4 881 435 263 5 178 chrX 38813097 38813268 -127837028 - RSINE1 SINE B4 -13 152 12 4 881 522 311 0 0 chrX 38813283 38813415 -127836881 - B1F1 SINE Alu -9 140 9 4 881 235 281 71 0 chrX 38813410 38813497 -127836799 - MER3 DNA MER1_type -105 104 7 4 881 285 29 0 0 chrX 38814841 38814875 -127835421 + (T)n Simple_repeat Simple_repeat 1 34 0 4 881 1282 20 0 0 chrX 38814878 38815024 -127835272 - B1_Mm SINE Alu 0 147 2 4 881 292 244 34 23 chrX 38815029 38815117 -127835179 + L3 LINE CR1 3535 3623 -866 4 881 805 265 12 0 chrX 38815283 38815449 -127834847 - B3A SINE B2 -30 168 1 4 881 538 312 103 68 chrX 38815692 38815984 -127834312 + L3 LINE CR1 4023 4324 -165 4 881 475 335 37 6 chrX 38817742 38817904 -127832392 + MER20 DNA MER1_type 53 219 0 4 881 1202 127 122 0 chrX 38818163 38818360 -127831936 + URR1B DNA MER1_type 5 225 0 4 881 227 191 0 0 chrX 38818660 38818702 -127831594 + L2a LINE L2 3328 3369 -6 4 881 1257 161 5 0 chrX 38818830 38819029 -127831267 - B3 SINE B2 -6 210 11 4 881 676 353 18 16 chrX 38819603 38819876 -127830420 - MLT1D LTR MaLR -2 503 248 4 881 242 224 0 65 chrX 38820859 38820921 -127829375 + L2a LINE L2 3368 3425 -1 4 881 267 338 39 66 chrX 38820915 38821111 -127829185 - MIR SINE MIR 0 268 65 4 881 1243 204 86 0 chrX 38821122 38821377 -127828919 - MTE2b LTR MaLR -4 375 99 4 881 515 275 7 37 chrX 38822039 38822175 -127828121 + B1_Mur2 SINE Alu 1 132 -17 4 881 450 0 0 0 chrX 38822437 38822487 -127827809 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 881 331 204 265 0 chrX 38823340 38823472 -127826824 - MER53 DNA hAT -13 180 14 4 881 252 0 0 0 chrX 38823891 38823919 -127826377 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 4 881 33161 80 14 4 chrX 38823966 38830096 -127820200 - L1Md_F2 LINE L1 -2 6580 446 4 881 227 254 0 17 chrX 38831567 38831627 -127818669 + (CTTG)n Simple_repeat Simple_repeat 2 60 0 4 881 25 83 0 0 chrX 38832256 38832316 -127817980 + AT_rich Low_complexity Low_complexity 1 60 0 4 881 290 342 0 57 chrX 38832832 38832956 -127817340 + MIRc SINE MIR 22 138 -130 4 881 990 199 148 14 chrX 38833347 38833638 -127816658 + Lx9 LINE L1 7293 7622 -22 4 881 960 180 16 11 chrX 38834636 38834821 -127815475 + B2_Mm2 SINE B2 2 187 -8 4 881 33864 35 1 0 chrX 38835638 38841702 -127808594 + L1Md_T LINE L1 1 5589 -297 4 881 8955 7 0 2 chrX 38841702 38842700 -127807596 + L1Md_T LINE L1 5590 6585 0 4 881 1321 211 56 15 chrX 38843611 38843952 -127806344 - L1MA6 LINE L1 -7 6293 5939 4 881 306 0 0 0 chrX 38844743 38844777 -127805519 + (GGGA)n Simple_repeat Simple_repeat 2 35 0 4 881 1019 112 0 6 chrX 38844967 38845129 -127805167 + (TTC)n Simple_repeat Simple_repeat 1 161 0 4 881 315 0 0 0 chrX 38845196 38845231 -127805065 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 881 288 297 42 28 chrX 38845325 38845467 -127804829 - B1F SINE Alu -3 146 3 4 881 237 328 57 32 chrX 38845777 38845900 -127804396 - L3 LINE CR1 -381 4108 3983 4 881 253 307 11 64 chrX 38848070 38848164 -127802132 + MER20 DNA MER1_type 104 192 -27 4 881 209 273 36 72 chrX 38848435 38848518 -127801778 - L2b LINE L2 -189 3186 3107 4 881 1177 289 55 36 chrX 38849926 38850457 -127799839 - MER67A LTR ERV1 0 543 3 4 881 221 283 106 32 chrX 38850491 38850633 -127799663 + MIR SINE MIR 7 149 -113 4 881 239 310 60 34 chrX 38850666 38850783 -127799513 - L2c LINE L2 -46 3341 3222 4 881 588 267 112 5 chrX 38851273 38851461 -127798835 - B3 SINE B2 -6 210 3 4 881 435 119 0 0 chrX 38851647 38851714 -127798582 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 881 276 329 37 104 chrX 38851797 38851960 -127798336 + L2c LINE L2 3180 3331 -56 4 881 349 95 16 16 chrX 38853654 38853718 -127796578 + (TA)n Simple_repeat Simple_repeat 1 64 0 4 881 276 288 118 16 chrX 38854112 38854239 -127796057 + MIR SINE MIR 123 262 0 4 881 4153 195 12 6 chrX 38854849 38855575 -127794721 - Lx5 LINE L1 -2 7048 6318 4 881 685 183 48 21 chrX 38855697 38855842 -127794454 + B1_Mur3 SINE Alu 1 149 0 4 881 449 269 0 9 chrX 38856199 38856315 -127793981 - PB1D10 SINE Alu 0 117 3 4 881 374 297 35 35 chrX 38856486 38856629 -127793667 + MIRb SINE MIR 123 265 -3 4 881 289 292 33 74 chrX 38857170 38857292 -127793004 - MIR3 SINE MIR -90 118 2 4 881 473 345 97 44 chrX 38857404 38857647 -127792649 - MIR SINE MIR -17 245 6 4 881 359 92 0 136 chrX 38858110 38858198 -127792098 - L1_Mus3 LINE L1 -2 6636 6561 4 881 241 224 441 18 chrX 38858200 38858311 -127791985 + B3 SINE B2 59 216 0 4 881 608 264 18 59 chrX 38859225 38859394 -127790902 + RSINE1 SINE B4 4 165 0 4 881 58 38 0 0 chrX 38859413 38859492 -127790804 + AT_rich Low_complexity Low_complexity 1 79 0 4 881 326 213 0 0 chrX 38859612 38859673 -127790623 + Lx6 LINE L1 6271 6331 -719 4 881 228 146 24 0 chrX 38859643 38859684 -127790612 + Lx6 LINE L1 6519 6560 -900 4 881 1326 275 78 19 chrX 38859722 38860244 -127790052 + Lx6 LINE L1 6506 7434 -26 4 881 236 292 85 53 chrX 38860329 38860423 -127789873 - MIRb SINE MIR -145 123 27 4 881 344 295 102 17 chrX 38860920 38861096 -127789200 - MER53 DNA hAT 0 193 3 4 881 330 123 0 0 chrX 38861607 38861664 -127788632 + (GA)n Simple_repeat Simple_repeat 2 58 0 4 881 483 33 0 0 chrX 38861673 38861734 -127788562 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 4 881 659 275 98 9 chrX 38862059 38862283 -127788013 - MIR SINE MIR -15 247 4 4 881 318 267 146 45 chrX 38862320 38862430 -127787866 - B1F2 SINE Alu -1 148 28 4 881 377 55 36 0 chrX 38862937 38862992 -127787304 + (TATG)n Simple_repeat Simple_repeat 2 58 0 4 881 1369 235 48 8 chrX 38865741 38866097 -127784199 - ORR1D2 LTR MaLR 0 370 1 4 881 1462 176 226 18 chrX 38866744 38866870 -127783426 - Lx4B LINE L1 0 7058 6939 4 881 402 21 0 0 chrX 38866870 38866917 -127783379 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 881 1462 176 226 18 chrX 38866917 38867188 -127783108 - Lx4B LINE L1 -120 6938 6580 4 881 246 116 0 0 chrX 38867201 38867244 -127783052 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 881 735 122 114 0 chrX 38867272 38867395 -127782901 - L1Md_F2 LINE L1 -14 6568 6432 4 881 1326 53 0 0 chrX 38867395 38867566 -127782730 + L1_Mm LINE L1 5453 5623 -260 4 881 460 335 13 19 chrX 38868015 38868173 -127782123 - MER5A1 DNA MER1_type -1 165 9 4 881 414 0 0 0 chrX 38868609 38868655 -127781641 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 881 247 173 11 69 chrX 38869021 38869038 -127781258 + T-rich Low_complexity Low_complexity 72 86 0 4 881 225 0 0 0 chrX 38869038 38869063 -127781233 + (TTGG)n Simple_repeat Simple_repeat 2 26 0 4 881 247 173 11 69 chrX 38869063 38869132 -127781164 + T-rich Low_complexity Low_complexity 5 71 0 5 881 2210 71 0 17 chrX 38869224 38869525 -127780771 - Lx3_Mus LINE L1 0 7009 6714 5 881 414 0 0 0 chrX 38869562 38869608 -127780688 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 881 306 388 0 17 chrX 38869609 38869727 -127780569 - B1F SINE Alu -10 139 24 5 881 253 328 23 23 chrX 38870464 38870592 -127779704 - MIR SINE MIR 0 262 135 5 881 373 281 21 10 chrX 38870802 38870899 -127779397 + MLT1K LTR MaLR 490 587 -8 5 881 673 282 18 18 chrX 38870919 38871085 -127779211 - MIR SINE MIR -71 191 26 5 881 219 380 0 0 chrX 38871395 38871466 -127778830 + ID4 SINE ID 3 73 -10 5 881 274 138 35 35 chrX 38872897 38873010 -127777286 + (TG)n Simple_repeat Simple_repeat 1 113 0 5 881 609 102 0 0 chrX 38873566 38873674 -127776622 + (TC)n Simple_repeat Simple_repeat 1 108 0 5 881 284 48 24 0 chrX 38873674 38873716 -127776580 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 881 421 332 48 75 chrX 38875298 38875526 -127774770 + MIR SINE MIR 40 261 -1 5 881 242 234 0 0 chrX 38875553 38875600 -127774696 - MIR SINE MIR -146 116 70 5 881 23 33 0 0 chrX 38876295 38876325 -127773971 + AT_rich Low_complexity Low_complexity 1 30 0 5 881 650 197 0 7 chrX 38877122 38877265 -127773031 + CT-rich Low_complexity Low_complexity 4 145 0 5 881 277 119 0 0 chrX 38877279 38877321 -127772975 + Lx7 LINE L1 7262 7303 -393 5 881 199 319 0 68 chrX 38877823 38877897 -127772399 + MIR3 SINE MIR 135 203 -5 5 881 360 0 0 0 chrX 38879284 38879324 -127770972 + (GA)n Simple_repeat Simple_repeat 1 40 0 5 881 474 304 91 82 chrX 38879337 38879545 -127770751 - B4A SINE B4 -76 216 7 5 881 339 279 13 0 chrX 38879638 38879717 -127770579 - ID4_ SINE ID -2 81 2 5 881 400 336 14 21 chrX 38882296 38882439 -127767857 - MER5A1 DNA MER1_type 0 166 25 5 881 907 252 118 11 chrX 38883231 38883604 -127766692 - L1MA8 LINE L1 -61 6230 5818 5 881 198 0 0 0 chrX 38886427 38886449 -127763847 + (TA)n Simple_repeat Simple_repeat 2 23 0 5 881 966 241 135 16 chrX 38886680 38886992 -127763304 - ORR1E LTR MaLR -10 349 1 5 881 941 76 0 0 chrX 38888769 38888900 -127761396 + B2_Mm2 SINE B2 1 131 -64 5 881 333 118 0 0 chrX 38888901 38888952 -127761344 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 881 471 358 138 31 chrX 38889218 38889509 -127760787 - LTR16A LTR ERVL -1 450 129 5 881 252 0 0 0 chrX 38890287 38890315 -127759981 + (A)n Simple_repeat Simple_repeat 1 28 0 5 881 237 361 28 0 chrX 38891325 38891397 -127758899 + ID4_ SINE ID 3 76 -7 5 881 322 220 0 0 chrX 38891705 38891764 -127758532 + RMER15 LTR ERVL 400 458 -117 5 881 451 375 49 8 chrX 38891942 38892187 -127758109 + L3 LINE CR1 4016 4270 -219 5 881 497 281 54 0 chrX 38892235 38892402 -127757894 - MamRep434 DNA TcMar -249 177 2 5 881 220 154 0 84 chrX 38893178 38893249 -127757047 + (GTTTG)n Simple_repeat Simple_repeat 1 65 0 5 881 780 195 7 0 chrX 38893250 38893399 -127756897 - B1_Mur4 SINE Alu 0 150 1 5 881 357 343 10 0 chrX 38893408 38893510 -127756786 - PB1D7 SINE Alu -7 113 11 5 881 781 291 40 6 chrX 38895421 38895692 -127754604 + Lx7 LINE L1 7105 7373 -323 5 881 251 283 74 12 chrX 38896707 38896801 -127753495 + MIR SINE MIR 64 168 -100 5 881 901 197 112 15 chrX 38897190 38897396 -127752900 - URR1A DNA MER1_type 0 226 1 5 881 23 33 0 0 chrX 38897439 38897469 -127752827 + AT_rich Low_complexity Low_complexity 1 30 0 5 881 4169 76 0 9 chrX 38897524 38898094 -127752202 - L1Md_F2 LINE L1 -3 6579 6015 5 881 910 161 199 6 chrX 38898675 38898856 -127751440 - B3 SINE B2 0 216 1 5 881 473 208 31 31 chrX 38899137 38899296 -127751000 - Lx9 LINE L1 0 7644 7486 5 881 455 310 20 34 chrX 38899333 38899480 -127750816 - B4A SINE B4 -6 286 142 5 881 191 320 0 0 chrX 38899586 38899636 -127750660 + MIR SINE MIR 185 234 -28 5 881 427 309 39 78 chrX 38899637 38899893 -127750403 - MIRc SINE MIR -20 248 3 5 881 691 309 32 20 chrX 38899961 38900212 -127750084 + L3b LINE CR1 1 254 -228 5 881 255 299 78 33 chrX 38900433 38900523 -127749773 - MER2 DNA MER2_type -14 331 238 5 881 249 351 0 0 chrX 38900859 38900933 -127749363 - MER2 DNA MER2_type -271 74 1 5 881 266 380 24 16 chrX 38901324 38901447 -127748849 + MIRc SINE MIR 8 131 -137 5 881 243 0 0 0 chrX 38901778 38901805 -127748491 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 881 432 0 0 0 chrX 38901805 38901852 -127748444 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 881 294 298 95 0 chrX 38901852 38901936 -127748360 - MIR SINE MIR -157 105 14 5 881 1069 108 11 0 chrX 38902870 38903046 -127747250 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 5 881 909 74 0 0 chrX 38903730 38903852 -127746444 + (GGAA)n Simple_repeat Simple_repeat 2 123 0 5 881 2917 59 115 54 chrX 38905309 38905754 -127744542 - L1_Mus2 LINE L1 -1 6565 6094 5 881 646 194 2 15 chrX 38906019 38906151 -127744145 - B1_Mur1 SINE Alu 0 149 1 5 881 620 233 15 0 chrX 38906945 38907078 -127743218 + B1_Mur1 SINE Alu 2 136 -13 5 881 553 301 105 0 chrX 38908646 38908799 -127741497 + B3 SINE B2 1 169 -47 5 881 234 0 0 0 chrX 38908803 38908829 -127741467 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 881 505 205 74 0 chrX 38909669 38909789 -127740507 - B1_Mur2 SINE Alu -21 128 2 5 881 276 207 82 20 chrX 38911111 38911208 -127739088 - MIR SINE MIR -86 182 82 5 881 279 314 81 24 chrX 38912376 38912500 -127737796 + MIRb SINE MIR 46 176 -92 5 881 280 182 18 0 chrX 38912785 38912840 -127737456 + L1_Mur2 LINE L1 4844 4899 -978 5 881 515 116 0 0 chrX 38912834 38912903 -127737393 - L1_Mus4 LINE L1 -194 6442 6374 5 881 322 243 34 67 chrX 38912932 38913051 -127737245 + MIR SINE MIR 96 210 -52 5 881 800 292 0 40 chrX 38913054 38913254 -127737042 + B4A SINE B4 55 246 -46 5 881 396 0 0 0 chrX 38913274 38913318 -127736978 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 881 382 114 29 0 chrX 38913322 38913392 -127736904 + (GA)n Simple_repeat Simple_repeat 1 72 0 5 881 531 345 0 0 chrX 38913396 38913544 -127736752 + B1F1 SINE Alu 1 148 -1 5 881 815 76 42 0 chrX 38913567 38913711 -127736585 + (TAGA)n Simple_repeat Simple_repeat 1 150 0 5 881 366 141 37 49 chrX 38913758 38913840 -127736456 - ORR1D2 LTR MaLR 0 370 290 5 881 935 10 0 0 chrX 38913840 38913944 -127736352 - L1_Mm LINE L1 -35 5848 5745 5 881 675 100 0 58 chrX 38913944 38914082 -127736214 + L1Md_F3 LINE L1 6455 6584 0 5 881 1270 250 78 14 chrX 38914083 38914398 -127735898 - ORR1D2 LTR MaLR -30 349 1 5 881 272 313 40 20 chrX 38914727 38914828 -127735468 - L2c LINE L2 -224 3163 3061 5 881 196 399 21 35 chrX 38914829 38914972 -127735324 - MIRb SINE MIR -35 233 93 5 881 231 286 46 35 chrX 38915063 38915150 -127735146 - MIRb SINE MIR -120 148 61 5 881 457 228 69 10 chrX 38915219 38915321 -127734975 + PB1D10 SINE Alu 9 116 -1 5 881 24 0 0 0 chrX 38915321 38915345 -127734951 + AT_rich Low_complexity Low_complexity 1 24 0 5 881 352 342 39 15 chrX 38915573 38915767 -127734529 + L2b LINE L2 3202 3386 -1 5 881 380 266 11 11 chrX 38917009 38917104 -127733192 + B1F1 SINE Alu 55 149 0 5 881 628 270 74 0 chrX 38917142 38917290 -127733006 - RSINE1 SINE B4 -4 161 3 5 881 436 303 88 47 chrX 38919376 38919772 -127730524 - Tigger15a DNA TcMar -111 604 107 5 881 357 62 0 0 chrX 38920608 38920656 -127729640 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 881 851 239 18 32 chrX 38920823 38921043 -127729253 - Tigger5 DNA MER2_type -40 2366 2150 5 881 642 302 69 9 chrX 38921314 38921531 -127728765 - MER2 DNA MER2_type -110 235 6 5 881 337 257 187 19 chrX 38921552 38921659 -127728637 + MIRm SINE MIR 37 161 -115 5 881 271 304 85 21 chrX 38921858 38921999 -127728297 + Arthur1A DNA Tip100 23 172 -5 5 881 599 246 108 77 chrX 38922299 38922482 -127727814 - MER20 DNA MER1_type -4 215 22 5 881 425 307 50 7 chrX 38923347 38923367 -127726929 + B1F1 SINE Alu 1 147 -2 5 881 465 222 33 33 chrX 38923367 38923488 -127726808 + ID_B1 SINE B4 102 222 -2 5 881 226 346 26 0 chrX 38923514 38923592 -127726704 + ID4_ SINE ID 3 82 -1 5 881 290 324 108 36 chrX 38924659 38924854 -127725442 + MER113A DNA MER1_type 1 209 -105 5 881 729 325 33 0 chrX 38925057 38925297 -127724999 - LTR16B1 LTR ERVL -9 471 224 5 881 238 88 0 0 chrX 38925722 38925756 -127724540 + PB1D10 SINE Alu 69 102 -15 5 881 280 297 8 8 chrX 38925840 38925959 -127724337 + GA-rich Low_complexity Low_complexity 2 120 0 5 881 492 294 76 27 chrX 38927344 38927606 -127722690 + MER113A DNA MER1_type 39 313 -1 5 882 642 304 25 6 chrX 38928434 38928593 -127721703 + RSINE1 SINE B4 2 163 -2 5 882 342 322 62 20 chrX 38928640 38928786 -127721510 + ID_B1 SINE B4 73 224 0 5 882 275 303 135 45 chrX 38929856 38930144 -127720152 - MER47A DNA MER2_type -45 321 1 5 882 216 0 0 0 chrX 38930630 38930654 -127719642 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 882 226 276 218 14 chrX 38930667 38930814 -127719482 - Charlie10 DNA MER1_type -1 2821 2645 5 882 608 329 0 47 chrX 38931010 38931182 -127719114 - RSINE1 SINE B4 0 165 2 6 882 512 303 0 13 chrX 38933327 38933484 -127716812 + L1M2 LINE L1 5494 5648 -643 6 882 266 291 46 46 chrX 38933550 38933658 -127716638 + B1_Mur3 SINE Alu 1 108 -41 6 882 226 250 0 55 chrX 38933662 38933717 -127716579 - MER47A DNA MER2_type -74 292 241 5 882 312 304 87 0 chrX 38933700 38933815 -127716481 - Tigger5 DNA MER2_type -2164 242 118 5 882 1711 164 77 17 chrX 38934164 38934517 -127715779 + ORR1C1 LTR MaLR 5 378 0 6 882 225 0 0 0 chrX 38936238 38936263 -127714033 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 882 1387 55 27 0 chrX 38936968 38937151 -127713145 - B2_Mm2 SINE B2 -7 188 1 6 882 266 338 159 47 chrX 38938974 38939188 -127711108 + LTR88b LTR Gypsy? 108 345 -492 6 882 423 250 0 0 chrX 38939417 38939521 -127710775 + L1ME2z LINE L1 6064 6167 -277 6 882 217 294 0 29 chrX 38939543 38939613 -127710683 + (CATATA)n Simple_repeat Simple_repeat 6 73 0 6 882 818 305 40 87 chrX 38939892 38940190 -127710106 + B4A SINE B4 9 292 0 6 882 506 152 0 32 chrX 38940751 38940846 -127709450 - Lx7 LINE L1 -1 7695 7604 6 882 579 66 0 0 chrX 38942516 38942592 -127707704 + (TA)n Simple_repeat Simple_repeat 2 77 0 6 882 408 263 40 0 chrX 38948163 38948262 -127702034 + RSINE1 SINE B4 46 148 -17 6 882 242 228 160 47 chrX 38948349 38948455 -127701841 - MIRb SINE MIR -25 243 126 6 882 452 274 31 19 chrX 38950066 38950241 -127700055 + L1MA4 LINE L1 5734 5922 -378 6 882 528 230 189 8 chrX 38950512 38950639 -127699657 + RSINE1 SINE B4 2 151 -14 6 882 249 374 73 29 chrX 38950829 38951033 -127699263 + MIRc SINE MIR 56 268 0 6 882 417 342 65 32 chrX 38953394 38953579 -127696717 - MIRb SINE MIR -8 260 68 6 882 1018 262 82 12 chrX 38953579 38953919 -127696377 - MLT1A0 LTR MaLR -1 364 1 6 882 417 342 65 32 chrX 38953919 38953981 -127696315 - MIRb SINE MIR -201 67 6 6 882 26 30 0 0 chrX 38954015 38954048 -127696248 + AT_rich Low_complexity Low_complexity 1 33 0 6 882 5018 191 43 21 chrX 38958203 38959233 -127691063 - Lx5 LINE L1 0 7050 5999 6 882 573 281 0 0 chrX 38959604 38959732 -127690564 + B1F SINE Alu 22 149 0 6 882 224 59 0 29 chrX 38960039 38960074 -127690222 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 882 618 290 45 6 chrX 38961263 38961440 -127688856 - RMER15 LTR ERVL 0 575 392 6 882 501 292 64 32 chrX 38961520 38961739 -127688557 + MIR SINE MIR 26 251 -11 6 882 633 96 0 34 chrX 38961942 38962061 -127688235 + (TTTC)n Simple_repeat Simple_repeat 2 116 0 6 882 699 288 107 6 chrX 38963951 38964269 -127686027 + L1MB7 LINE L1 5553 5902 -282 6 882 381 314 54 42 chrX 38964473 38964639 -127685657 + MER96B DNA hAT 250 417 0 6 882 805 323 40 4 chrX 38964731 38964980 -127685316 + B4A SINE B4 33 290 -2 6 882 821 307 33 7 chrX 38965158 38965430 -127684866 + B4 SINE B4 1 279 -13 6 882 219 69 0 0 chrX 38966054 38966083 -127684213 + (CTTTG)n Simple_repeat Simple_repeat 3 31 0 6 882 309 211 28 0 chrX 38966200 38966271 -127684025 - MER112 DNA MER1_type 0 261 189 6 882 240 302 156 14 chrX 38967073 38967214 -127683082 - MIRb SINE MIR -102 166 6 6 882 324 278 86 70 chrX 38967808 38967970 -127682326 + MIR SINE MIR 5 166 -102 6 882 1113 260 99 7 chrX 38969836 38970130 -127680166 - MER2 DNA MER2_type -24 321 1 6 882 270 0 0 0 chrX 38970759 38970789 -127679507 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 882 341 253 13 0 chrX 38970796 38970875 -127679421 - RSINE1 SINE B4 -30 135 56 6 882 240 305 43 102 chrX 38970925 38971111 -127679185 + MIR SINE MIR 82 256 -6 6 882 261 0 0 0 chrX 38972194 38972223 -127678073 + (TTG)n Simple_repeat Simple_repeat 3 31 0 6 882 872 156 0 21 chrX 38972626 38972770 -127677526 + B1_Mus1 SINE Alu 8 148 0 6 882 364 272 29 10 chrX 38973152 38973256 -127677040 - MER5B DNA MER1_type 0 178 73 6 882 244 244 0 25 chrX 38973408 38973474 -127676822 - MTEa LTR MaLR -39 340 278 6 882 438 351 65 7 chrX 38974360 38974515 -127675781 + MIR3 SINE MIR 22 185 -23 6 882 1171 234 35 14 chrX 38977267 38977553 -127672743 + B4A SINE B4 1 292 0 6 882 4656 8 0 0 chrX 38977859 38978377 -127671919 + L1Md_T LINE L1 6065 6582 0 6 882 432 341 52 0 chrX 38978723 38978858 -127671438 + B1F SINE Alu 1 142 -7 6 882 389 343 40 6 chrX 38979602 38979775 -127670521 - MIRc SINE MIR -36 232 54 6 882 530 73 0 0 chrX 38981550 38981618 -127668678 - L1_Mus1 LINE L1 -95 6472 6405 6 882 484 83 0 0 chrX 38981619 38981691 -127668605 + L1_Mus1 LINE L1 6496 6567 0 6 882 223 49 49 0 chrX 38982285 38982326 -127667970 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 6 882 410 281 28 17 chrX 38982649 38982830 -127667466 - L1MA5 LINE L1 -8 6292 6110 6 882 253 68 45 0 chrX 38983313 38983357 -127666939 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 882 226 250 200 0 chrX 38983681 38983741 -127666555 + ID4_ SINE ID 5 76 -7 6 882 384 372 36 52 chrX 38983994 38984190 -127666106 + L3 LINE CR1 4114 4298 -191 6 882 821 196 180 0 chrX 38984190 38984379 -127665917 - URR1B DNA MER1_type -2 223 1 6 882 384 372 36 52 chrX 38984379 38984491 -127665805 + L3 LINE CR1 4299 4417 -72 6 882 396 317 10 0 chrX 38984559 38984663 -127665633 - PB1 SINE Alu 0 127 23 6 882 260 391 64 0 chrX 38984699 38984809 -127665487 - PB1D10 SINE Alu 0 117 1 6 882 21 0 0 0 chrX 38985719 38985740 -127664556 + AT_rich Low_complexity Low_complexity 1 21 0 6 882 524 319 0 0 chrX 38985761 38985902 -127664394 - RSINE1 SINE B4 -17 148 8 6 882 387 0 0 0 chrX 38986446 38986489 -127663807 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 882 1035 308 92 16 chrX 38988778 38989320 -127660976 - Lx7 LINE L1 -1 7472 6875 6 882 459 240 100 8 chrX 38990370 38990500 -127659796 - MER3 DNA MER1_type -26 183 42 6 882 480 308 0 27 chrX 38990640 38990790 -127659506 - MIRb SINE MIR -44 224 79 6 882 1303 263 60 28 chrX 38991622 38991986 -127658310 - MTEb LTR MaLR 0 379 4 6 882 258 133 22 0 chrX 38992065 38992110 -127658186 - ORR1E LTR MaLR -4 355 310 6 882 534 241 129 6 chrX 38992117 38992280 -127658016 + B3A SINE B2 5 187 -11 6 882 482 0 0 0 chrX 38992324 38992379 -127657917 - ORR1A0 LTR MaLR 0 346 292 6 882 28115 20 0 0 chrX 38992385 38996410 -127653886 - L1Md_T LINE L1 0 6582 2559 6 882 2433 20 0 10 chrX 38996410 38996708 -127653588 - ORR1A0 LTR MaLR -51 295 1 6 882 1556 239 81 14 chrX 38996708 38997059 -127653237 - MTD LTR MaLR -44 375 1 6 882 306 0 0 0 chrX 38997713 38997747 -127652549 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 882 212 286 12 23 chrX 38997834 38997920 -127652376 - MIR SINE MIR -6 256 172 6 882 276 234 20 50 chrX 38998695 38998794 -127651502 - L2a LINE L2 -5 3421 3326 6 882 210 399 87 32 chrX 39000443 39000720 -127649576 + L3 LINE CR1 3921 4212 -277 1 882 396 0 0 0 chrX 39000844 39000888 -127649408 + (A)n Simple_repeat Simple_repeat 1 44 0 2 882 207 288 233 36 chrX 39001006 39001229 -127649067 + L3 LINE CR1 4221 4487 -2 1 882 663 257 44 0 chrX 39001405 39001541 -127648755 + RSINE1 SINE B4 8 149 -16 3 882 278 203 0 0 chrX 39001693 39001757 -127648539 - Tigger12 DNA MER2_type -145 1814 1751 4 882 330 235 205 25 chrX 39001833 39001955 -127648341 - MIR SINE MIR -85 177 34 5 882 233 328 122 56 chrX 39002151 39002279 -127648017 - Tigger12 DNA MER2_type -1731 228 94 4 882 288 0 0 0 chrX 39002279 39002311 -127647985 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 882 233 328 122 56 chrX 39002311 39002395 -127647901 - Tigger12 DNA MER2_type -1866 93 3 4 882 25 51 0 0 chrX 39002698 39002737 -127647559 + AT_rich Low_complexity Low_complexity 1 39 0 7 882 391 247 0 0 chrX 39003808 39003885 -127646411 - PB1D10 SINE Alu -40 77 1 8 882 820 168 15 0 chrX 39004028 39004165 -127646131 - B1_Mur4 SINE Alu -11 139 1 9 882 196 333 27 96 chrX 39004218 39004364 -127645932 - L2c LINE L2 -1 3386 3251 1 882 187 329 28 31 chrX 39004478 39004595 -127645701 - L2c LINE L2 -304 3083 2969 1 882 742 321 85 32 chrX 39004986 39005195 -127645101 + L2 LINE L2 2604 2826 -593 1 882 288 0 0 0 chrX 39005195 39005227 -127645069 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 882 742 321 85 32 chrX 39005227 39005393 -127644903 + L2 LINE L2 2827 2999 -420 1 882 196 111 0 0 chrX 39006086 39006113 -127644183 + L2b LINE L2 3338 3364 -11 1 882 307 394 118 15 chrX 39006102 39006509 -127643787 + L3 LINE CR1 3848 4296 -193 1 882 482 248 113 33 chrX 39006889 39007020 -127643276 + B3A SINE B2 23 159 -34 1 882 477 34 0 0 chrX 39007020 39007079 -127643217 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 882 348 281 88 38 chrX 39007079 39007106 -127643190 + B2_Mm1a SINE B2 160 188 -5 1 882 414 146 0 0 chrX 39010037 39010119 -127640177 + (CA)n Simple_repeat Simple_repeat 1 82 0 1 882 496 333 73 47 chrX 39010676 39011085 -127639211 + MamRep434 DNA TcMar 4 423 -3 1 882 284 325 55 115 chrX 39012555 39012937 -127637359 - MamRep434 DNA TcMar -67 359 1 1 882 441 0 0 0 chrX 39013561 39013610 -127636686 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 2 882 181 210 16 16 chrX 39014301 39014364 -127635932 + (TA)n Simple_repeat Simple_repeat 2 64 0 2 882 295 341 45 0 chrX 39016840 39016928 -127633368 + B1F1 SINE Alu 2 93 -56 2 882 223 304 18 0 chrX 39016931 39016987 -127633309 + B4 SINE B4 28 84 -208 2 882 351 0 0 0 chrX 39017016 39017055 -127633241 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 882 303 93 0 0 chrX 39017360 39017403 -127632893 + (A)n Simple_repeat Simple_repeat 1 43 0 2 882 808 47 8 23 chrX 39017421 39017552 -127632744 - L1Md_F2 LINE L1 0 6582 6454 2 882 227 336 9 89 chrX 39018202 39018314 -127631982 + MIR SINE MIR 73 171 -91 2 882 501 221 0 0 chrX 39018631 39018776 -127631520 + (TG)n Simple_repeat Simple_repeat 1 145 0 2 882 472 135 31 0 chrX 39019090 39019186 -127631110 + CT-rich Low_complexity Low_complexity 4 102 0 2 882 887 236 26 0 chrX 39019279 39019474 -127630822 - MER20 DNA MER1_type -5 214 15 3 882 1158 286 58 41 chrX 39019693 39019932 -127630364 - Charlie1b DNA MER1_type 0 523 282 3 882 1103 95 0 0 chrX 39019932 39020079 -127630217 + B1_Mus2 SINE Alu 1 147 0 3 882 1158 286 58 41 chrX 39020079 39020353 -127629943 - Charlie1b DNA MER1_type -242 281 1 3 882 258 105 0 0 chrX 39023130 39023168 -127627128 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 882 188 208 147 40 chrX 39024395 39024470 -127625826 + MIRm SINE MIR 71 153 -123 3 882 240 175 0 0 chrX 39024541 39024604 -127625692 + T-rich Low_complexity Low_complexity 1 63 0 3 882 819 270 50 47 chrX 39025876 39026198 -127624098 - MER33 DNA MER1_type 0 324 2 3 882 252 0 0 0 chrX 39026998 39027026 -127623270 + (T)n Simple_repeat Simple_repeat 1 28 0 3 882 235 357 6 3 chrX 39027197 39027285 -127623011 - MIRc SINE MIR -146 130 42 3 882 1045 184 42 0 chrX 39027425 39027615 -127622681 + B3 SINE B2 12 209 -7 3 882 414 39 0 0 chrX 39027699 39027751 -127622545 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 882 369 0 0 0 chrX 39027771 39027812 -127622484 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 882 343 336 28 0 chrX 39028022 39028129 -127622167 - PB1D7 SINE Alu -10 110 1 4 882 185 284 59 15 chrX 39028297 39028365 -127621931 - MIRm SINE MIR -126 150 80 4 882 805 173 5 9 chrX 39028376 39028594 -127621702 + GA-rich Low_complexity Low_complexity 1 216 0 4 882 360 155 0 0 chrX 39029885 39029956 -127620340 + (CA)n Simple_repeat Simple_repeat 2 72 0 4 882 251 264 10 71 chrX 39030999 39031097 -127619199 - Kanga1a DNA Tc2 -458 296 205 4 882 1168 51 0 0 chrX 39032199 39032336 -127617960 - B1_Mm SINE Alu -9 138 2 4 882 806 237 42 37 chrX 39032713 39032928 -127617368 - B3 SINE B2 0 216 1 4 882 944 196 116 0 chrX 39033405 39033594 -127616702 + B3 SINE B2 1 211 -5 4 882 460 342 102 15 chrX 39035369 39035574 -127614722 + MER58A DNA MER1_type 1 223 -1 5 882 3170 84 5 9 chrX 39035646 39036081 -127614215 + L1_Mus2 LINE L1 6134 6566 0 5 882 288 311 104 0 chrX 39036088 39036194 -127614102 + PB1D10 SINE Alu 1 117 0 5 882 22 0 0 0 chrX 39036470 39036492 -127613804 + AT_rich Low_complexity Low_complexity 1 22 0 5 882 648 310 79 22 chrX 39036538 39036805 -127613491 - B4A SINE B4 -9 283 2 5 882 662 293 128 18 chrX 39037330 39037556 -127612740 + MTE2b LTR MaLR 4 254 -125 5 882 515 231 52 45 chrX 39037969 39038123 -127612173 + MTE2b LTR MaLR 225 379 0 5 882 1857 170 33 71 chrX 39038519 39038887 -127611409 - ORR1B1 LTR MaLR 0 394 41 5 882 415 248 204 0 chrX 39038964 39039121 -127611175 + MLT1B LTR MaLR 192 380 -10 5 882 2065 239 38 7 chrX 39039676 39040119 -127610177 + MT2A LTR ERVL 8 464 -69 5 882 375 335 116 18 chrX 39040783 39040947 -127609349 + LTR16B1 LTR ERVL 138 317 -163 5 882 801 176 14 21 chrX 39041340 39041485 -127608811 + B1_Mur3 SINE Alu 1 144 -5 6 882 1457 257 198 101 chrX 39042306 39042568 -127607728 + RLTR25B LTR ERVK 11 316 -787 6 882 333 0 0 0 chrX 39042568 39042605 -127607691 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 882 2220 187 134 52 chrX 39042605 39043339 -127606957 + RLTR25B LTR ERVK 317 1103 0 6 882 665 240 16 39 chrX 39043339 39043493 -127606803 + MTE2b LTR MaLR 230 379 0 6 882 1491 68 8 83 chrX 39043592 39043834 -127606462 - L1_Mus2 LINE L1 0 6566 6343 6 882 506 198 50 25 chrX 39044208 39044220 -127606076 + B4 SINE B4 77 91 -201 6 882 889 67 8 0 chrX 39044220 39044339 -127605957 + B1_Mus1 SINE Alu 2 121 -27 6 882 272 328 132 36 chrX 39044359 39044609 -127605687 - B4 SINE B4 -18 274 1 6 882 1236 92 40 0 chrX 39044639 39044812 -127605484 + B2_Mm2 SINE B2 2 181 -14 6 882 346 88 0 0 chrX 39044862 39044919 -127605377 + B2_Mm1t SINE B2 127 183 -10 6 882 415 278 157 0 chrX 39044934 39045049 -127605247 + B1F SINE Alu 10 142 -7 7 882 650 13 13 0 chrX 39045911 39045990 -127604306 + (TC)n Simple_repeat Simple_repeat 2 81 0 7 882 360 0 0 0 chrX 39046062 39046102 -127604194 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 7 882 774 270 24 108 chrX 39046290 39046631 -127603665 - LTR81A LTR ERV1? -1038 312 1 7 882 239 278 69 0 chrX 39046774 39046846 -127603450 - MIR SINE MIR -121 141 65 7 882 304 324 74 0 chrX 39047158 39047266 -127603030 - PB1D10 SINE Alu -1 116 1 7 882 627 247 56 26 chrX 39048200 39048395 -127601901 + B3 SINE B2 4 204 -12 7 882 242 233 0 0 chrX 39048663 39048706 -127601590 + B1_Mus2 SINE Alu 1 43 -104 7 882 350 289 0 130 chrX 39049334 39049465 -127600831 + MT2B LTR ERVL 151 264 -337 7 882 914 196 0 0 chrX 39049352 39049495 -127600801 + B1_Mus1 SINE Alu 1 143 -5 7 882 21 36 0 0 chrX 39049517 39049545 -127600751 + AT_rich Low_complexity Low_complexity 1 28 0 8 882 252 188 0 0 chrX 39050047 39050111 -127600185 + (TA)n Simple_repeat Simple_repeat 1 64 0 8 882 2707 165 21 19 chrX 39050138 39050620 -127599676 + RLTR19A LTR ERVK 14 496 0 8 882 486 361 97 53 chrX 39050990 39051086 -127599210 - MLT1I LTR MaLR -138 273 164 8 882 1178 161 66 5 chrX 39051086 39051298 -127598998 - URR1B DNA MER1_type 0 225 1 8 882 486 361 97 53 chrX 39051298 39051429 -127598867 - MLT1I LTR MaLR -248 163 36 8 882 439 184 81 0 chrX 39051441 39051577 -127598719 - Lx9 LINE L1 -7 7637 7491 8 882 234 338 25 76 chrX 39051610 39051767 -127598529 - L2 LINE L2 -582 2837 2689 8 882 945 123 79 6 chrX 39052035 39052199 -127598097 - ORR1B1 LTR MaLR -8 386 211 8 882 35386 57 1 23 chrX 39052199 39059066 -127591230 - L1Md_T LINE L1 0 6582 99 8 882 896 148 69 194 chrX 39059066 39059283 -127591013 - ORR1B1 LTR MaLR -165 229 1 8 110 797 245 136 10 chrX 39059366 39059564 -127590732 - ID_B1 SINE B4 0 224 2 8 883 262 280 119 8 chrX 39061249 39061375 -127588921 + LTR33B LTR ERVL 336 475 -28 9 883 4532 149 42 0 chrX 39062030 39062802 -127587494 - L1_Mur2 LINE L1 -795 5082 4279 9 883 7596 159 36 33 chrX 39062959 39062991 -127587305 + Lx2A LINE L1 4450 4482 -1395 9 883 6692 106 9 7 chrX 39062991 39063907 -127586389 - Lx2 LINE L1 -12 6985 6068 9 883 9324 133 25 17 chrX 39063907 39066368 -127583928 + Lx2A LINE L1 4483 6968 -40 9 883 406 94 0 15 chrX 39066369 39066434 -127583862 + Lx2A LINE L1 6925 6988 -20 9 883 390 256 51 0 chrX 39066434 39066551 -127583745 + URR1B DNA MER1_type 99 221 -4 9 883 909 256 59 52 chrX 39066575 39066864 -127583432 + Lx8 LINE L1 7172 7462 -11 9 883 638 291 93 44 chrX 39068131 39068498 -127581798 - Lx8 LINE L1 -1 7472 7088 9 883 307 110 55 0 chrX 39069032 39069105 -127581191 + (TCTCTG)n Simple_repeat Simple_repeat 6 82 0 9 883 1937 266 85 25 chrX 39069126 39069221 -127581075 - L1MA9 LINE L1 -198 6114 6025 9 883 3633 103 125 4 chrX 39069221 39069757 -127580539 - MT2B LTR ERVL 0 601 1 1 883 1937 266 85 25 chrX 39069757 39070387 -127579909 - L1MA9 LINE L1 -288 6024 5345 9 883 7000 58 0 2 chrX 39070401 39071274 -127579022 - L1Md_F3 LINE L1 -159 6425 5558 1 883 39 50 0 0 chrX 39071626 39071686 -127578610 + AT_rich Low_complexity Low_complexity 1 60 0 1 883 2137 293 95 37 chrX 39071725 39071856 -127578440 - L1_Rod LINE L1 0 5847 5713 1 883 1298 89 22 22 chrX 39071856 39072040 -127578256 - B2_Mm2 SINE B2 -9 186 3 1 883 2137 293 95 37 chrX 39072040 39073164 -127577132 - L1_Rod LINE L1 -135 5712 4519 1 883 565 252 28 0 chrX 39073171 39073314 -127576982 + L1_Mm LINE L1 4425 4571 -1312 1 883 441 0 0 0 chrX 39073469 39073518 -127576778 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1 883 289 340 87 22 chrX 39073716 39074194 -127576102 - L1MDa LINE L1 -4569 2064 1431 1 883 481 178 136 27 chrX 39074187 39074297 -127575999 + Lx7 LINE L1 6739 6860 -836 1 883 3121 18 0 3 chrX 39074299 39074637 -127575659 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 883 55901 26 17 7 chrX 39074637 39081043 -127569253 - IAPEz-int LTR ERVK 0 6481 8 1 883 3121 18 0 3 chrX 39081043 39081381 -127568915 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 883 459 0 0 0 chrX 39081419 39081470 -127568826 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 883 387 0 0 0 chrX 39081470 39081512 -127568784 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 883 713 297 21 9 chrX 39081530 39081804 -127568492 - L1MA4 LINE L1 -371 5929 5613 1 883 422 183 34 119 chrX 39081823 39081856 -127568440 + L1MA5 LINE L1 6144 6169 -131 1 883 587 278 118 11 chrX 39081856 39082034 -127568262 + B3 SINE B2 2 198 -18 1 883 594 41 0 0 chrX 39082034 39082107 -127568189 + (CATA)n Simple_repeat Simple_repeat 4 76 0 1 883 422 183 34 119 chrX 39082107 39082190 -127568106 + L1MA5 LINE L1 6170 6250 -50 1 883 2585 95 3 0 chrX 39082317 39082643 -127567653 - ORR1A2 LTR MaLR 0 327 1 1 883 804 249 93 12 chrX 39083617 39083865 -127566431 - MTD LTR MaLR -1 418 151 1 883 207 0 0 0 chrX 39084204 39084227 -127566069 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 1 883 217 302 188 6 chrX 39084241 39084401 -127565895 - L2a LINE L2 -27 3399 3211 1 883 244 366 0 24 chrX 39084409 39084493 -127565803 + LTR16E1 LTR ERVL 7 88 -450 1 883 1236 328 64 19 chrX 39084554 39085150 -127565146 - L2a LINE L2 -452 2967 2345 1 883 539 371 9 19 chrX 39085269 39085483 -127564813 - RMER15 LTR ERVL -17 558 347 1 883 531 192 159 48 chrX 39085744 39085870 -127564426 + B1_Mur2 SINE Alu 1 140 -9 1 883 1311 74 0 0 chrX 39085871 39086047 -127564249 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 1 883 696 24 0 0 chrX 39086047 39086128 -127564168 + (GGAA)n Simple_repeat Simple_repeat 4 85 0 1 883 403 167 33 107 chrX 39086129 39086250 -127564046 - Lx7 LINE L1 -606 7090 6979 1 883 21 0 0 0 chrX 39087484 39087505 -127562791 + AT_rich Low_complexity Low_complexity 1 21 0 1 883 726 294 76 4 chrX 39087510 39087746 -127562550 + Lx8 LINE L1 6778 7030 -443 1 883 393 215 64 11 chrX 39088154 39088248 -127562048 - B1F SINE Alu -2 147 49 1 883 286 306 43 35 chrX 39089938 39090043 -127560253 - MER5A DNA MER1_type 0 189 84 1 883 431 315 0 0 chrX 39090043 39090153 -127560143 + B4A SINE B4 1 110 -182 1 883 1215 269 122 8 chrX 39090153 39090513 -127559783 - MTD LTR MaLR 0 419 19 1 883 440 211 0 0 chrX 39090529 39090605 -127559691 + B4A SINE B4 106 181 -111 1 883 6229 60 11 3 chrX 39090730 39091479 -127558817 - L1Md_F2 LINE L1 -1 6581 5827 1 883 469 264 191 30 chrX 39091750 39091918 -127558378 + B3A SINE B2 1 195 -3 1 883 234 224 0 183 chrX 39091921 39091992 -127558304 + B4A SINE B4 219 276 -16 1 883 378 0 0 0 chrX 39091995 39092037 -127558259 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 883 217 167 18 18 chrX 39092756 39092811 -127557485 + CT-rich Low_complexity Low_complexity 4 58 0 1 883 290 102 0 0 chrX 39093286 39093335 -127556961 - Lx2 LINE L1 0 6997 6949 1 883 1746 214 128 20 chrX 39093336 39093927 -127556369 - Lx7 LINE L1 0 7696 7004 1 883 663 256 64 44 chrX 39093938 39094142 -127556154 - MER20 DNA MER1_type -6 213 6 1 883 271 283 21 32 chrX 39094246 39094341 -127555955 + MIRb SINE MIR 117 210 -58 1 883 251 275 0 70 chrX 39094491 39094577 -127555719 + MLT1A1 LTR MaLR 1 80 -328 1 883 293 167 0 0 chrX 39094789 39094837 -127555459 + B3A SINE B2 21 68 -130 1 883 2333 141 34 57 chrX 39095111 39095186 -127555110 - ORR1C1 LTR MaLR 0 378 316 1 883 1464 61 0 16 chrX 39095186 39095369 -127554927 - B2_Mm2 SINE B2 -14 181 2 1 883 2333 141 34 57 chrX 39095369 39095678 -127554618 - ORR1C1 LTR MaLR -63 315 3 1 883 1280 212 0 0 chrX 39096235 39096447 -127553849 - B3 SINE B2 -4 212 1 1 883 271 237 25 38 chrX 39096769 39096848 -127553448 + MTEb LTR MaLR 1 78 -301 1 883 621 214 17 0 chrX 39096811 39096928 -127553368 + B1_Mur2 SINE Alu 31 149 0 1 883 559 264 50 44 chrX 39096931 39097113 -127553183 + MTEb LTR MaLR 38 220 -159 1 883 230 274 81 40 chrX 39097095 39097194 -127553102 + LTR52 LTR ERVL 220 322 -99 1 883 554 250 0 0 chrX 39097271 39097375 -127552921 + B4A SINE B4 128 231 -61 1 883 382 125 0 0 chrX 39097384 39097440 -127552856 + L1_Mus2 LINE L1 6494 6549 -17 1 883 36340 45 0 3 chrX 39097440 39102894 -127547402 + L1Md_T LINE L1 57 5589 -297 1 883 9169 26 0 0 chrX 39102894 39103890 -127546406 + L1Md_T LINE L1 5590 6585 0 1 883 4314 121 56 14 chrX 39103896 39104534 -127545762 + Lx4B LINE L1 6394 7058 0 1 883 741 299 34 45 chrX 39105002 39105293 -127545003 - RMER15 LTR ERVL 0 575 288 1 883 573 15 0 0 chrX 39105631 39105697 -127544599 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 883 917 70 0 0 chrX 39105699 39105827 -127544469 - Lx2B LINE L1 -94 6906 6779 1 883 428 270 35 55 chrX 39106196 39106341 -127543955 - RSINE1 SINE B4 -15 150 9 1 883 293 324 25 133 chrX 39106348 39106381 -127543915 + B4 SINE B4 68 171 -121 1 883 581 304 7 35 chrX 39106381 39106524 -127543772 + B1_Mur1 SINE Alu 6 144 -5 1 883 293 324 25 133 chrX 39106524 39106544 -127543752 + B4 SINE B4 172 242 -50 1 883 661 283 42 130 chrX 39107210 39107629 -127542667 + L1M2 LINE L1 2543 2919 -3224 1 883 279 0 0 0 chrX 39107629 39107660 -127542636 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 1 883 594 283 43 132 chrX 39107660 39107925 -127542371 + L1M2 LINE L1 2920 3193 -2950 1 883 521 285 82 29 chrX 39107935 39108105 -127542191 + ID_B1 SINE B4 15 193 -31 1 883 497 284 30 0 chrX 39108237 39108406 -127541890 + L1_Mur3 LINE L1 4096 4269 -1611 1 883 198 0 0 0 chrX 39108411 39108433 -127541863 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 1 883 1304 294 33 63 chrX 39108884 39109580 -127540716 + L1M2 LINE L1 4568 5242 -901 1 883 1759 189 54 14 chrX 39109583 39109937 -127540359 + MTE2b LTR MaLR 6 373 -6 1 883 1222 129 52 0 chrX 39109972 39110166 -127540130 - URR1B DNA MER1_type 0 225 22 1 883 323 222 0 16 chrX 39110751 39110815 -127539481 - PB1D10 SINE Alu -1 116 54 1 883 300 331 64 91 chrX 39110834 39111240 -127539056 - LTR37B LTR ERV1 -72 396 2 1 883 25 0 0 0 chrX 39111297 39111322 -127538974 + AT_rich Low_complexity Low_complexity 1 25 0 1 883 317 278 38 7 chrX 39111395 39111500 -127538796 + PB1D10 SINE Alu 13 119 -1 1 883 967 239 14 0 chrX 39111811 39112024 -127538272 - B3 SINE B2 0 216 1 1 883 22 0 0 0 chrX 39112179 39112201 -127538095 + AT_rich Low_complexity Low_complexity 1 22 0 1 883 485 256 56 0 chrX 39112202 39112362 -127537934 - L1MA4A LINE L1 -375 5928 5760 1 883 941 220 24 0 chrX 39112598 39112807 -127537489 - B3 SINE B2 0 216 3 1 883 529 313 116 53 chrX 39112818 39113155 -127537141 + L1M4 LINE L1 4089 4446 -1700 1 883 754 243 173 65 chrX 39113300 39113687 -127536609 + Lx9 LINE L1 7161 7589 -55 1 883 1027 206 64 8 chrX 39113895 39114130 -127536166 - Lx5 LINE L1 -81 6969 6722 1 883 278 159 111 0 chrX 39114113 39114176 -127536120 + Lx5 LINE L1 6978 7047 -3 1 883 220 189 19 19 chrX 39114177 39114231 -127536065 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 1 883 439 17 33 0 chrX 39114256 39114316 -127535980 + (CAA)n Simple_repeat Simple_repeat 2 63 0 1 883 586 210 114 114 chrX 39114994 39115214 -127535082 + MT2A LTR ERVL 41 260 -273 1 883 630 323 24 1 chrX 39115221 39115563 -127534733 + L1_Mur3 LINE L1 5176 5558 -742 1 883 501 110 0 0 chrX 39115661 39115743 -127534553 + (TG)n Simple_repeat Simple_repeat 2 83 0 1 883 650 239 24 30 chrX 39115854 39116018 -127534278 + MTD LTR MaLR 4 166 -253 1 883 1028 304 101 30 chrX 39115944 39116175 -127534121 + MT2A LTR ERVL 63 303 -230 1 883 1176 161 22 44 chrX 39116175 39116403 -127533893 - URR1B DNA MER1_type -2 223 1 1 883 1028 304 101 30 chrX 39116403 39116605 -127533691 + MT2A LTR ERVL 304 526 -7 1 883 7223 80 6 11 chrX 39116618 39117664 -127532632 - L1_Mus3 LINE L1 -10 6628 5588 1 883 4165 108 2 2 chrX 39117674 39118311 -127531985 + L1_Mus3 LINE L1 4939 5575 -308 1 883 1512 126 9 4 chrX 39119043 39119274 -127531022 - RLTR10E LTR ERVK -79 232 1 1 883 644 98 0 10 chrX 39119501 39119604 -127530692 + (GA)n Simple_repeat Simple_repeat 1 102 0 1 883 207 100 0 0 chrX 39119839 39119869 -127530427 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 883 315 104 0 0 chrX 39120112 39120160 -127530136 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 883 1189 288 55 47 chrX 39120338 39120829 -127529467 - Charlie1a DNA MER1_type -410 1045 551 1 883 366 115 160 23 chrX 39120807 39120925 -127529371 - B2_Mm2 SINE B2 0 195 47 1 883 1103 113 6 0 chrX 39120977 39121136 -127529160 - B2_Mm1t SINE B2 -32 161 2 1 883 243 222 31 16 chrX 39121136 39121196 -127529100 - Charlie1a DNA MER1_type -886 569 509 1 883 1449 189 87 34 chrX 39121227 39121582 -127528714 + ORR1D1 LTR MaLR 1 374 0 1 883 255 304 168 5 chrX 39121687 39121872 -127528424 - Charlie1a DNA MER1_type -957 498 284 1 883 1131 52 13 0 chrX 39121902 39122057 -127528239 - L1Md_F2 LINE L1 -2 6580 6424 1 883 607 318 73 17 chrX 39122205 39122493 -127527803 - MLT1D LTR MaLR -3 502 199 1 883 247 344 21 21 chrX 39122500 39122595 -127527701 - LTR52 LTR ERVL -8 413 319 1 883 380 259 23 12 chrX 39122604 39122690 -127527606 + B1_Mur3 SINE Alu 2 88 -61 1 883 1934 127 53 122 chrX 39122735 39123130 -127527166 + RLTR14 LTR ERV1 3 370 -12 1 883 2225 159 225 2 chrX 39123127 39123580 -127526716 + RMER15 LTR ERVL 22 575 0 1 883 234 237 0 119 chrX 39123580 39123647 -127526649 + B1_Mur1 SINE Alu 85 143 -6 2 883 243 333 0 0 chrX 39123705 39123780 -127526516 - B4A SINE B4 -2 290 216 2 883 36448 41 0 3 chrX 39123823 39130228 -127520068 - L1Md_T LINE L1 0 6585 100 2 883 925 121 19 19 chrX 39130230 39130390 -127519906 - Lx4B LINE L1 -652 6406 6247 2 883 465 97 0 27 chrX 39130387 39130461 -127519835 + Lx4B LINE L1 6166 6237 -821 2 883 966 177 119 22 chrX 39130905 39131090 -127519206 + B3 SINE B2 1 203 -13 2 883 236 265 0 81 chrX 39132403 39132477 -127517819 + MIR SINE MIR 195 262 0 2 883 230 333 35 12 chrX 39132792 39132877 -127517419 + B3 SINE B2 69 155 -61 2 883 1567 245 50 31 chrX 39133199 39133918 -127516378 + L1_Mur3 LINE L1 279 1148 -6580 2 883 33635 65 0 8 chrX 39133917 39140232 -127510064 - L1Md_F2 LINE L1 -10 6572 307 2 883 1087 147 83 9 chrX 39140232 39140557 -127509739 + L1_Mur3 LINE L1 1134 1483 -4397 2 883 1132 143 25 11 chrX 39140557 39140763 -127509533 + B2_Mm1t SINE B2 2 216 0 2 883 1518 132 53 0 chrX 39140778 39141081 -127509215 + L1_Mur3 LINE L1 1473 1791 -4089 2 883 1337 171 19 31 chrX 39141273 39141593 -127508703 + L1_Mur3 LINE L1 2077 2392 -3488 2 883 406 88 15 0 chrX 39141690 39141758 -127508538 + L1_Mur3 LINE L1 1729 1797 -4083 2 883 23 68 0 0 chrX 39142028 39142072 -127508224 + AT_rich Low_complexity Low_complexity 1 44 0 2 883 1107 52 37 0 chrX 39142216 39142352 -127507944 + B1_Mus2 SINE Alu 2 142 -5 2 883 244 327 63 113 chrX 39144339 39144577 -127505719 - RLTR41 LTR ERV1 -156 290 65 2 883 1741 162 133 9 chrX 39144680 39145017 -127505279 - ORR1B1 LTR MaLR -14 380 2 2 883 3010 203 127 60 chrX 39145018 39145979 -127504317 + Lx7 LINE L1 6670 7694 -2 2 883 201 333 0 39 chrX 39146022 39146100 -127504196 + L4 LINE RTE 1431 1505 -524 2 883 608 201 88 22 chrX 39146174 39146311 -127503985 - B1_Mur1 SINE Alu 0 149 4 2 883 307 236 83 0 chrX 39146566 39146638 -127503658 + B1_Mus2 SINE Alu 1 78 -69 2 883 249 291 96 10 chrX 39146705 39146809 -127503487 + PB1D10 SINE Alu 3 115 -2 2 883 1326 275 34 26 chrX 39147081 39147578 -127502718 + Lx3C LINE L1 6464 6964 -12 2 883 26 0 0 0 chrX 39147584 39147610 -127502686 + AT_rich Low_complexity Low_complexity 1 26 0 2 883 1017 250 122 8 chrX 39149856 39150207 -127500089 + L1MB7 LINE L1 5746 6136 -48 2 883 473 231 68 8 chrX 39151105 39151223 -127499073 + B1F SINE Alu 18 142 -7 2 883 340 333 11 0 chrX 39153275 39153368 -127496928 + B1F SINE Alu 55 148 -1 2 883 418 186 57 0 chrX 39153689 39153759 -127496537 - ID4_ SINE ID -9 74 1 2 883 21 0 0 0 chrX 39154676 39154697 -127495599 + AT_rich Low_complexity Low_complexity 1 21 0 2 883 186 115 38 19 chrX 39154710 39154763 -127495533 + (TA)n Simple_repeat Simple_repeat 1 54 0 2 883 795 203 22 0 chrX 39154863 39155001 -127495295 + B1_Mur1 SINE Alu 1 141 -8 2 883 1919 263 85 31 chrX 39156923 39157445 -127492851 + L1MB5 LINE L1 5165 5747 -427 2 883 550 250 0 20 chrX 39157445 39157596 -127492700 + B1F SINE Alu 2 149 0 2 883 1919 256 84 33 chrX 39157596 39157946 -127492350 + L1MB5 LINE L1 5748 6118 -56 2 883 855 193 111 24 chrX 39157946 39158087 -127492209 - URR1B DNA MER1_type 0 225 82 2 883 1258 91 57 0 chrX 39158087 39158263 -127492033 + B2_Mm2 SINE B2 1 186 -9 2 883 855 193 111 24 chrX 39158263 39158328 -127491968 - URR1B DNA MER1_type -144 81 1 2 883 349 239 75 58 chrX 39158656 39158670 -127491626 + B4 SINE B4 77 102 -190 2 883 772 92 0 48 chrX 39158670 39158684 -127491612 + B1_Mus1 SINE Alu 9 18 -130 2 883 657 38 0 0 chrX 39158684 39158764 -127491532 + (TGG)n Simple_repeat Simple_repeat 1 80 0 2 883 349 239 75 58 chrX 39158764 39158855 -127491441 + B4 SINE B4 103 198 -94 2 883 772 92 0 48 chrX 39158855 39158875 -127491421 + B1_Mus1 SINE Alu 19 128 -20 2 883 463 321 6 12 chrX 39159202 39159372 -127490924 + Lx8 LINE L1 7163 7331 -142 2 883 200 319 0 32 chrX 39160210 39160304 -127489992 + CT-rich Low_complexity Low_complexity 2 92 0 2 883 208 255 0 0 chrX 39160211 39160258 -127490038 + T-rich Low_complexity Low_complexity 5 51 0 2 883 1665 44 0 0 chrX 39161158 39161361 -127488935 + L1Md_T LINE L1 6380 6582 0 2 883 1186 68 0 0 chrX 39161687 39161834 -127488462 + B1_Mm SINE Alu 1 147 0 2 883 22 0 0 0 chrX 39163298 39163320 -127486976 + AT_rich Low_complexity Low_complexity 1 22 0 2 883 319 41 20 20 chrX 39163457 39163507 -127486789 + (GAGAA)n Simple_repeat Simple_repeat 5 54 0 2 883 255 61 0 0 chrX 39163710 39163743 -127486553 + (T)n Simple_repeat Simple_repeat 1 33 0 2 883 530 122 132 11 chrX 39163743 39163834 -127486462 - MTC LTR MaLR -252 169 68 2 883 3022 33 5 5 chrX 39163841 39164209 -127486087 - L1_Mus1 LINE L1 0 6567 6200 2 883 314 12 0 0 chrX 39164215 39164260 -127486036 + L1_Mus1 LINE L1 6114 6158 -408 2 883 216 352 34 11 chrX 39164297 39164386 -127485910 + MIRc SINE MIR 123 213 -55 2 883 34 72 0 0 chrX 39165861 39165930 -127484366 + AT_rich Low_complexity Low_complexity 1 69 0 2 883 236 291 0 0 chrX 39167737 39167792 -127482504 + CT-rich Low_complexity Low_complexity 5 59 0 2 883 29 0 0 0 chrX 39167811 39167840 -127482456 + AT_rich Low_complexity Low_complexity 1 29 0 2 883 422 246 7 116 chrX 39167860 39167875 -127482421 + ID_B1 SINE B4 79 209 -15 2 883 780 151 0 45 chrX 39167875 39168007 -127482289 + B1_Mur4 SINE Alu 10 135 -15 2 883 180 200 0 0 chrX 39168016 39168056 -127482240 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 2 883 414 0 0 0 chrX 39168679 39168725 -127481571 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 883 211 262 0 0 chrX 39168725 39168767 -127481529 + G-rich Low_complexity Low_complexity 2 43 0 2 883 905 311 108 47 chrX 39168927 39169187 -127481109 + L1MA4 LINE L1 2153 2417 -3430 2 883 1304 103 16 5 chrX 39169187 39169373 -127480923 + B2_Mm2 SINE B2 3 190 -5 2 883 1119 303 102 21 chrX 39169373 39170277 -127480019 + L1MA4 LINE L1 2418 3404 -2739 2 883 225 65 0 0 chrX 39170277 39170308 -127479988 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 883 1119 303 102 21 chrX 39170308 39170377 -127479919 + L1MA4 LINE L1 3405 3482 -2661 2 883 1984 119 3 63 chrX 39170465 39170796 -127479500 + ORR1A2 LTR MaLR 1 311 -16 2 883 1280 118 0 5 chrX 39170896 39171084 -127479212 + B2_Mm2 SINE B2 2 188 -7 2 883 891 209 93 16 chrX 39171098 39171125 -127479171 - B3 SINE B2 -6 210 182 2 883 189 74 0 0 chrX 39171125 39171152 -127479144 + (TATG)n Simple_repeat Simple_repeat 4 30 0 2 883 891 209 93 16 chrX 39171152 39171318 -127478978 - B3 SINE B2 -35 181 2 2 883 527 277 209 10 chrX 39171319 39171902 -127478394 + L1MA4 LINE L1 3717 4415 -1725 2 883 768 202 67 26 chrX 39171958 39172151 -127478145 + Lx7 LINE L1 7494 7694 -2 2 883 1043 278 31 96 chrX 39172185 39172339 -127477957 + L1MA4 LINE L1 4471 4626 -1517 2 883 390 101 0 0 chrX 39172339 39172408 -127477888 + (CAGA)n Simple_repeat Simple_repeat 4 72 0 2 883 1043 278 31 96 chrX 39172408 39172837 -127477459 + L1MA4 LINE L1 4627 5016 -1127 2 883 395 228 11 0 chrX 39172846 39172938 -127477358 + L1MA4 LINE L1 5157 5249 -894 2 883 7544 71 5 1 chrX 39172965 39173940 -127476356 + L1_Mus1 LINE L1 5589 6567 0 2 883 672 303 96 12 chrX 39174025 39174349 -127475947 + L1MA4 LINE L1 5366 5716 -575 2 883 1452 80 10 0 chrX 39174349 39174548 -127475748 + L1Md_A LINE L1 6380 6580 -2 2 883 595 283 67 57 chrX 39174548 39174824 -127475472 + L1MA4 LINE L1 5717 5938 -251 2 883 508 314 90 131 chrX 39175108 39175398 -127474898 + B4 SINE B4 1 278 -14 2 883 396 0 0 0 chrX 39175461 39175505 -127474791 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 883 194 107 53 18 chrX 39177176 39177233 -127473063 + (CATATA)n Simple_repeat Simple_repeat 4 62 0 2 883 434 253 119 0 chrX 39178008 39178132 -127472164 - MIR SINE MIR -34 234 88 2 883 2058 110 12 22 chrX 39178136 39178460 -127471836 + ORR1A4 LTR MaLR 1 321 -8 2 883 627 81 0 0 chrX 39179969 39180055 -127470241 + (CATATA)n Simple_repeat Simple_repeat 4 89 0 2 883 1456 72 0 15 chrX 39182098 39182294 -127468002 - B2_Mm2 SINE B2 -1 194 2 2 883 630 26 0 0 chrX 39182485 39182561 -127467735 + (TC)n Simple_repeat Simple_repeat 1 76 0 2 883 513 0 0 0 chrX 39182576 39182633 -127467663 + (TG)n Simple_repeat Simple_repeat 1 57 0 2 883 6016 32 0 0 chrX 39184187 39184896 -127465400 - L1Md_T LINE L1 -2 6580 5872 2 883 690 52 0 0 chrX 39184891 39184988 -127465308 + L1Md_T LINE L1 6486 6582 0 2 883 617 282 152 21 chrX 39185027 39185415 -127464881 + L1MA6 LINE L1 5858 6296 -4 2 883 290 262 65 69 chrX 39185539 39185756 -127464540 + Lx9 LINE L1 5899 6114 -1530 2 883 449 296 22 29 chrX 39185839 39185978 -127464318 + Lx9 LINE L1 6343 6480 -1164 2 883 429 20 0 0 chrX 39185998 39186048 -127464248 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 883 546 302 145 4 chrX 39187346 39187458 -127462838 - Tigger7 DNA MER2_type -12 2479 2358 2 883 1779 126 78 12 chrX 39187458 39187779 -127462517 + Lx2 LINE L1 6656 6997 0 2 883 546 302 145 4 chrX 39187779 39187935 -127462361 - Tigger7 DNA MER2_type -134 2357 2174 2 883 589 347 55 22 chrX 39187985 39188259 -127462037 - Tigger7 DNA MER2_type -2195 296 14 2 883 489 283 31 8 chrX 39188791 39188919 -127461377 + ORR1E LTR MaLR 1 131 -228 2 883 549 114 0 0 chrX 39189031 39189136 -127461160 + (GGGA)n Simple_repeat Simple_repeat 2 106 0 2 883 393 132 12 62 chrX 39189387 39189468 -127460828 + B1_Mur2 SINE Alu 34 110 -39 2 883 690 13 0 0 chrX 39189474 39189553 -127460743 + (TC)n Simple_repeat Simple_repeat 1 79 0 2 883 962 209 43 14 chrX 39189886 39190095 -127460201 - B3 SINE B2 0 216 2 2 883 216 267 247 11 chrX 39190133 39190315 -127459981 - MIR SINE MIR 0 262 38 2 110 782 305 10 0 chrX 39190481 39190678 -127459618 - B3 SINE B2 -15 201 3 2 884 344 333 18 26 chrX 39190918 39191032 -127459264 - 5S rRNA rRNA -8 113 1 2 884 774 161 16 0 chrX 39191973 39192097 -127458199 + B1_Mur3 SINE Alu 23 148 -1 2 884 296 237 65 41 chrX 39192330 39192453 -127457843 + Lx7 LINE L1 7553 7678 -18 2 884 21 36 0 0 chrX 39193799 39193827 -127456469 + AT_rich Low_complexity Low_complexity 1 28 0 2 884 207 267 173 74 chrX 39193985 39194066 -127456230 - L2c LINE L2 -3 3384 3296 2 884 259 349 18 0 chrX 39194147 39194256 -127456040 - PB1D10 SINE Alu -5 112 2 2 884 1335 74 23 0 chrX 39194331 39194507 -127455789 + B2_Mm2 SINE B2 2 181 -14 2 884 658 281 32 44 chrX 39194654 39194970 -127455326 - L1MA7 LINE L1 -28 6263 5962 2 884 570 29 0 0 chrX 39194984 39195054 -127455242 + B1_Mus2 SINE Alu 72 141 -6 2 884 1146 70 0 0 chrX 39195078 39195220 -127455076 + B1_Mus1 SINE Alu 1 142 -6 2 884 229 83 0 59 chrX 39195226 39195244 -127455052 + (TAAAAA)n Simple_repeat Simple_repeat 5 21 0 2 884 1127 88 0 0 chrX 39195244 39195392 -127454904 + B1_Mus1 SINE Alu 1 148 0 3 884 229 83 0 59 chrX 39195392 39195424 -127454872 + (TAAAAA)n Simple_repeat Simple_repeat 4 34 0 3 884 425 250 43 0 chrX 39195426 39195542 -127454754 + L1MA9 LINE L1 5814 5934 -378 3 884 1376 62 0 11 chrX 39196218 39196398 -127453898 + B2_Mm2 SINE B2 2 179 -16 3 884 225 0 0 0 chrX 39196453 39196478 -127453818 + (A)n Simple_repeat Simple_repeat 1 25 0 3 884 329 355 73 7 chrX 39196866 39197002 -127453294 + RSINE1 SINE B4 12 156 -9 3 884 22 35 0 0 chrX 39197030 39197059 -127453237 + AT_rich Low_complexity Low_complexity 1 29 0 3 884 276 30 0 0 chrX 39197620 39197653 -127452643 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 884 217 200 40 0 chrX 39198235 39198285 -127452011 + GA-rich Low_complexity Low_complexity 1 52 0 3 884 386 229 342 13 chrX 39198312 39198467 -127451829 - ID_B1 SINE B4 -17 207 2 3 884 636 150 78 85 chrX 39198597 39198750 -127451546 - URR1B DNA MER1_type -1 224 73 3 884 619 197 78 16 chrX 39199031 39199160 -127451136 + B1_Mur4 SINE Alu 13 149 -1 3 884 855 226 9 96 chrX 39200681 39200901 -127449395 + B3 SINE B2 5 205 -11 3 884 244 322 81 0 chrX 39200954 39201041 -127449255 + PB1D10 SINE Alu 3 96 -21 3 884 247 241 57 31 chrX 39201077 39201270 -127449026 + RMER17C LTR ERVK 78 275 -135 3 884 435 308 24 42 chrX 39201666 39201832 -127448464 + RSINE1 SINE B4 3 165 0 3 884 207 0 0 0 chrX 39202041 39202064 -127448232 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 884 821 193 40 50 chrX 39202189 39202391 -127447905 + B3 SINE B2 3 202 -14 3 884 1291 90 96 0 chrX 39202639 39202827 -127447469 + L1_Mus1 LINE L1 6362 6567 0 3 884 526 248 101 0 chrX 39203448 39203577 -127446719 + B1_Mur3 SINE Alu 7 148 -1 3 884 975 230 25 20 chrX 39203628 39203832 -127446464 + B3 SINE B2 7 211 -5 3 884 741 253 6 41 chrX 39204020 39204189 -127446107 + RSINE1 SINE B4 3 165 0 3 884 6242 212 79 20 chrX 39204276 39206036 -127444260 + Lx7 LINE L1 5587 7459 -1 3 884 646 236 36 0 chrX 39206598 39206738 -127443558 + MER5A DNA MER1_type 14 158 -31 3 884 6644 54 59 1 chrX 39206738 39207621 -127442675 + L1_Mus1 LINE L1 5642 6654 0 3 884 284 229 212 0 chrX 39208034 39208146 -127442150 + B3A SINE B2 9 161 -37 3 884 1090 252 150 25 chrX 39208289 39208591 -127441705 + L1ME1 LINE L1 5282 5596 -583 3 884 430 252 0 112 chrX 39208591 39208725 -127441571 - PB1D9 SINE Alu 0 120 2 3 884 1090 254 161 29 chrX 39208725 39209129 -127441167 + L1ME1 LINE L1 5597 6088 -76 3 884 390 57 0 0 chrX 39209129 39209182 -127441114 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 3 884 956 266 170 33 chrX 39209182 39209193 -127441103 + L1ME1 LINE L1 6089 6099 -65 3 884 2552 65 10 61 chrX 39213619 39214012 -127436284 - L1_Mur1 LINE L1 -1734 4152 3780 3 884 916 131 0 61 chrX 39214007 39214123 -127436173 + Lx3_Mus LINE L1 5789 5904 -1105 3 884 670 12 0 0 chrX 39214123 39214207 -127436089 + L1Md_T LINE L1 6498 6581 -1 3 884 916 131 0 61 chrX 39214207 39214253 -127436043 + Lx3_Mus LINE L1 5905 5941 -1068 3 884 369 243 42 67 chrX 39214672 39214791 -127435505 - L1M4c LINE L1 -3401 2981 2866 3 884 341 253 100 20 chrX 39214801 39214902 -127435394 - PB1D10 SINE Alu 0 117 10 3 884 225 327 73 12 chrX 39215288 39215452 -127434844 - L1M4c LINE L1 -3769 2613 2440 3 884 245 237 55 73 chrX 39215487 39215651 -127434645 - L1M4c LINE L1 -3953 2431 2271 3 884 33 0 0 0 chrX 39216162 39216195 -127434101 + AT_rich Low_complexity Low_complexity 1 33 0 3 884 258 30 0 0 chrX 39217124 39217142 -127433154 + (CA)n Simple_repeat Simple_repeat 2 19 0 3 884 258 0 71 0 chrX 39217142 39217184 -127433112 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 884 258 30 0 0 chrX 39217184 39217198 -127433098 + (CA)n Simple_repeat Simple_repeat 2 15 0 3 884 551 85 12 0 chrX 39217833 39217915 -127432381 + (GA)n Simple_repeat Simple_repeat 1 83 0 3 884 1017 104 116 0 chrX 39218246 39218410 -127431886 - B2_Mm2 SINE B2 -8 187 5 3 884 668 301 5 5 chrX 39218983 39219180 -127431116 + Lx6 LINE L1 7234 7430 -30 3 884 189 74 0 0 chrX 39219223 39219250 -127431046 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 3 884 452 217 23 77 chrX 39219251 39219381 -127430915 + MT2B LTR ERVL 156 278 -323 3 884 816 131 8 0 chrX 39219265 39219387 -127430909 + B1_Mus1 SINE Alu 5 127 -21 3 884 240 35 0 0 chrX 39219394 39219423 -127430873 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 884 1513 294 60 40 chrX 39220377 39221537 -127428759 + L1M2 LINE L1 2598 3781 -2362 3 884 583 239 35 0 chrX 39221544 39221686 -127428610 + B1_Mur3 SINE Alu 3 149 0 3 884 1186 281 113 4 chrX 39221699 39222210 -127428086 + L1M2 LINE L1 4649 5215 -928 3 884 280 269 25 37 chrX 39222321 39222402 -127427894 + PB1D10 SINE Alu 38 117 0 3 884 487 290 45 40 chrX 39223426 39223627 -127426669 - MER2B DNA MER2_type -9 327 126 3 884 204 179 0 0 chrX 39224031 39224070 -127426226 + A-rich Low_complexity Low_complexity 1 39 0 3 884 281 65 0 0 chrX 39224678 39224724 -127425572 + Lx2A LINE L1 6961 7006 -2 3 884 28 61 0 0 chrX 39225264 39225313 -127424983 + AT_rich Low_complexity Low_complexity 1 49 0 3 884 1053 63 0 34 chrX 39226125 39226272 -127424024 + B1_Mus1 SINE Alu 7 148 0 3 884 734 229 130 0 chrX 39226488 39226680 -127423616 - ID_B1 SINE B4 -4 220 4 3 884 23 33 0 0 chrX 39226862 39226892 -127423404 + AT_rich Low_complexity Low_complexity 1 30 0 3 884 412 272 35 35 chrX 39227230 39227371 -127422925 + B1F2 SINE Alu 2 142 -7 3 884 209 320 39 26 chrX 39227582 39227659 -127422637 + L3 LINE CR1 4366 4443 -46 3 884 568 235 0 0 chrX 39227686 39227801 -127422495 + PB1D10 SINE Alu 1 115 -2 3 884 578 264 73 40 chrX 39227906 39228056 -127422240 - B4A SINE B4 -13 279 125 3 884 458 200 27 62 chrX 39228090 39228202 -127422094 - PB1D9 SINE Alu -8 112 5 3 884 515 275 19 84 chrX 39228132 39228287 -127422009 - B4A SINE B4 -140 152 8 3 884 224 91 0 22 chrX 39228306 39228351 -127421945 + (TTG)n Simple_repeat Simple_repeat 2 45 0 3 884 427 270 0 10 chrX 39228362 39228463 -127421833 - B1F SINE Alu -19 130 31 3 884 474 238 136 11 chrX 39228780 39228918 -127421378 - ID_B1 SINE B4 -27 265 106 3 884 249 274 0 52 chrX 39229201 39229278 -127421018 + ID4_ SINE ID 1 73 -10 3 884 631 269 0 20 chrX 39229347 39229499 -127420797 - B1_Mur1 SINE Alu 0 149 1 3 884 222 306 116 104 chrX 39230008 39230172 -127420124 + MIRb SINE MIR 103 268 0 3 884 895 31 0 59 chrX 39230239 39230374 -127419922 - L1Md_F2 LINE L1 -2 6580 6454 3 884 4057 75 0 14 chrX 39230374 39230939 -127419357 + L1_Mus1 LINE L1 5874 6430 -137 3 884 540 275 107 27 chrX 39230940 39231127 -127419169 - B3 SINE B2 -12 204 3 3 884 705 175 45 76 chrX 39231143 39231341 -127418955 - B2_Mm2 SINE B2 -2 193 2 3 884 670 38 149 9 chrX 39231746 39231853 -127418443 + L1Md_F2 LINE L1 6459 6580 -2 3 884 197 119 0 23 chrX 39232065 39232108 -127418188 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 3 884 31 26 0 0 chrX 39232884 39232922 -127417374 + AT_rich Low_complexity Low_complexity 1 38 0 3 884 398 244 13 121 chrX 39233298 39233447 -127416849 + B1_Mur1 SINE Alu 15 147 -2 3 884 29 28 0 0 chrX 39234747 39234783 -127415513 + AT_rich Low_complexity Low_complexity 1 36 0 3 884 296 236 18 0 chrX 39235519 39235574 -127414722 - ID SINE ID -166 58 3 3 884 237 306 0 28 chrX 39235593 39235673 -127414623 - B1F1 SINE Alu -72 77 2 3 884 25 31 0 0 chrX 39235928 39235960 -127414336 + AT_rich Low_complexity Low_complexity 1 32 0 3 884 717 295 58 0 chrX 39236173 39236380 -127413916 + ID_B1 SINE B4 2 220 -4 3 884 446 245 19 203 chrX 39236409 39236670 -127413626 + ID_B1 SINE B4 1 213 -11 3 884 22 0 0 0 chrX 39236727 39236749 -127413547 + AT_rich Low_complexity Low_complexity 1 22 0 3 884 4143 68 5 0 chrX 39236749 39237305 -127412991 - L1_Mus1 LINE L1 -380 6187 5629 3 884 2722 51 50 24 chrX 39237305 39237685 -127412611 + L1_Mus1 LINE L1 6178 6567 0 3 884 22 0 0 0 chrX 39238009 39238031 -127412265 + AT_rich Low_complexity Low_complexity 1 22 0 3 884 245 85 163 41 chrX 39238324 39238373 -127411923 + MTC LTR MaLR 367 421 0 3 884 922 224 167 30 chrX 39238385 39238722 -127411574 + MTC-int LTR MaLR 1 394 -864 3 884 1161 68 0 13 chrX 39238722 39238872 -127411424 + B1_Mus1 SINE Alu 1 148 0 3 884 822 145 0 0 chrX 39238872 39239010 -127411286 + (GGA)n Simple_repeat Simple_repeat 2 139 0 3 884 2522 175 43 53 chrX 39239019 39239580 -127410716 + RMER1B Other Other 494 1048 -18 3 884 4458 12 0 0 chrX 39239701 39240194 -127410102 + MT2_Mm LTR ERVL 1 493 0 3 884 38812 15 14 0 chrX 39240194 39245481 -127404815 + MERVL-int LTR ERVL 1 5360 -125 3 884 360 191 46 35 chrX 39245481 39245568 -127404728 + MTC-int LTR MaLR 553 640 -1323 3 884 302 0 0 0 chrX 39245568 39245606 -127404690 + MERVL-int LTR ERVL 5448 5485 0 3 884 4458 12 0 0 chrX 39245606 39246099 -127404197 + MT2_Mm LTR ERVL 1 493 0 3 884 438 232 12 0 chrX 39246746 39246828 -127403468 + B3 SINE B2 48 130 -86 3 884 21 36 0 0 chrX 39246870 39246898 -127403398 + AT_rich Low_complexity Low_complexity 1 28 0 3 884 2663 195 62 185 chrX 39246941 39247097 -127403199 + MTD-int LTR MaLR 380 511 -747 3 884 1407 126 9 30 chrX 39247097 39247327 -127402969 - URR1A DNA MER1_type -1 225 1 3 884 2663 195 62 185 chrX 39247327 39248173 -127402123 + MTD-int LTR MaLR 512 1258 0 3 884 1859 209 60 25 chrX 39248173 39248570 -127401726 + MTD LTR MaLR 1 411 -8 3 884 1650 230 57 69 chrX 39248768 39249400 -127400896 + Lx6 LINE L1 6455 7436 -24 3 884 360 0 0 0 chrX 39249483 39249523 -127400773 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 884 222 338 0 29 chrX 39249552 39249622 -127400674 - BC1_Mm scRNA scRNA -71 81 14 3 884 717 197 36 0 chrX 39249741 39249878 -127400418 - B1F SINE Alu -7 142 1 3 884 429 70 0 0 chrX 39250061 39250118 -127400178 + (T)n Simple_repeat Simple_repeat 1 57 0 3 884 1041 58 73 0 chrX 39250118 39250255 -127400041 - B1_Mus2 SINE Alu 0 147 1 3 884 31 58 0 0 chrX 39250302 39250354 -127399942 + AT_rich Low_complexity Low_complexity 1 52 0 3 884 308 286 130 11 chrX 39251308 39251400 -127398896 + ID_B1 SINE B4 83 185 -39 4 884 229 283 117 39 chrX 39251312 39251415 -127398881 + PB1D10 SINE Alu 6 116 -1 4 884 186 133 0 0 chrX 39251472 39251502 -127398794 + (T)n Simple_repeat Simple_repeat 1 30 0 4 884 248 222 16 0 chrX 39251785 39251848 -127398448 + L1M2 LINE L1 5650 5713 -578 4 884 687 258 20 44 chrX 39252205 39252408 -127397888 - B3A SINE B2 0 198 1 4 884 406 212 25 0 chrX 39253082 39253162 -127397134 + ID4 SINE ID 2 83 0 4 884 210 71 0 0 chrX 39253230 39253258 -127397038 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 4 884 366 311 0 0 chrX 39253329 39253432 -127396864 - PB1D10 SINE Alu -12 105 3 4 884 461 268 94 8 chrX 39253548 39253676 -127396620 - B1F SINE Alu -1 148 10 4 884 614 244 208 11 chrX 39253743 39254002 -127396294 + Charlie1a DNA MER1_type 558 835 -620 4 884 408 112 301 43 chrX 39254016 39254109 -127396187 + PB1D10 SINE Alu 1 117 0 4 884 208 229 0 0 chrX 39254111 39254172 -127396124 + A-rich Low_complexity Low_complexity 1 61 0 4 884 295 237 40 0 chrX 39254536 39254612 -127395684 - ID4_ SINE ID -3 80 2 4 884 268 216 79 26 chrX 39254619 39254695 -127395601 - B1F SINE Alu -2 147 68 4 884 1066 157 131 0 chrX 39254951 39255142 -127395154 + URR1A DNA MER1_type 1 216 -10 4 884 270 283 13 80 chrX 39255196 39255234 -127395062 + YREP_Mm Unknown Unknown 148 287 -1525 4 884 477 295 9 0 chrX 39255234 39255346 -127394950 - ID_B1 SINE B4 -1 223 111 4 884 471 299 106 5 chrX 39255385 39255573 -127394723 + ID_B1 SINE B4 2 208 -16 4 884 307 312 31 31 chrX 39255628 39255724 -127394572 + PB1D7 SINE Alu 16 111 -9 4 884 1559 52 5 0 chrX 39255932 39256124 -127394172 + B2_Mm1t SINE B2 1 193 0 4 884 257 226 48 0 chrX 39256323 39256385 -127393911 + PB1D10 SINE Alu 46 110 -7 4 884 198 0 0 0 chrX 39256386 39256408 -127393888 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 4 884 1093 76 14 0 chrX 39257045 39257190 -127393106 + B1_Mus2 SINE Alu 1 147 0 4 884 195 42 0 0 chrX 39257192 39257216 -127393080 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 4 884 795 243 60 28 chrX 39257521 39257737 -127392559 + ID_B1 SINE B4 2 224 0 4 884 352 239 99 82 chrX 39257934 39258116 -127392180 - B2_Mm2 SINE B2 -10 185 1 4 884 376 303 32 59 chrX 39258153 39258339 -127391957 - B3A SINE B2 -16 182 2 4 884 587 274 48 73 chrX 39258378 39258543 -127391753 + RSINE1 SINE B4 3 163 -2 4 884 385 144 72 0 chrX 39258739 39258836 -127391460 + Lx9 LINE L1 7540 7643 -1 4 884 1021 174 114 65 chrX 39258956 39259263 -127391033 + RLTR19-int LTR ERVK 1681 2002 -4135 4 884 186 222 0 0 chrX 39259323 39259377 -127390919 + T-rich Low_complexity Low_complexity 1 54 0 4 884 1469 216 83 98 chrX 39259422 39259890 -127390406 + RMER4A LTR ERVK 6 466 0 4 884 532 223 48 32 chrX 39260101 39260226 -127390070 + B1F SINE Alu 23 149 0 4 884 364 325 34 0 chrX 39260563 39260680 -127389616 + PB1 SINE Alu 5 125 -2 4 884 388 232 0 12 chrX 39260687 39260770 -127389526 + ID SINE ID 2 83 -141 4 884 871 237 30 15 chrX 39260770 39260967 -127389329 + ID_B1 SINE B4 20 219 -5 4 884 315 174 218 30 chrX 39260970 39261071 -127389225 + PB1D9 SINE Alu 1 120 0 4 884 249 234 0 0 chrX 39261079 39261143 -127389153 + GA-rich Low_complexity Low_complexity 2 65 0 4 884 460 177 57 89 chrX 39261324 39261448 -127388848 + MT2B LTR ERVL 145 264 -337 4 884 1056 64 14 0 chrX 39261342 39261482 -127388814 + B1_Mus1 SINE Alu 6 147 -1 4 884 289 188 42 12 chrX 39261544 39261620 -127388676 + B1_Mur1 SINE Alu 17 128 -21 4 884 197 182 0 18 chrX 39261620 39261676 -127388620 + A-rich Low_complexity Low_complexity 1 55 0 4 884 443 48 16 0 chrX 39261972 39262034 -127388262 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 884 382 261 80 0 chrX 39262035 39262123 -127388173 - B3A SINE B2 -44 154 60 4 884 446 228 35 9 chrX 39262187 39262302 -127387994 - PB1D7 SINE Alu -2 118 1 4 884 229 259 69 0 chrX 39262346 39262404 -127387892 + PB1D10 SINE Alu 51 112 -5 4 884 306 0 0 0 chrX 39262412 39262446 -127387850 + (TC)n Simple_repeat Simple_repeat 1 34 0 4 884 243 0 0 0 chrX 39262487 39262514 -127387782 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 884 198 0 0 0 chrX 39262514 39262536 -127387760 + (T)n Simple_repeat Simple_repeat 1 22 0 4 884 863 37 0 0 chrX 39262536 39262645 -127387651 - B1_Mm SINE Alu 0 147 39 4 884 326 215 61 51 chrX 39262579 39262677 -127387619 - RLTR25B LTR ERVK -519 509 411 4 884 188 34 0 33 chrX 39262965 39262995 -127387301 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 884 487 282 143 14 chrX 39263513 39263729 -127386567 - MIR SINE MIR -2 260 17 4 884 22 80 0 0 chrX 39264850 39264900 -127385396 + GC_rich Low_complexity Low_complexity 1 50 0 4 884 1047 64 0 0 chrX 39265716 39265857 -127384439 + B1_Mus1 SINE Alu 8 148 0 4 884 279 71 0 0 chrX 39265859 39265901 -127384395 + (A)n Simple_repeat Simple_repeat 1 42 0 4 884 255 302 0 0 chrX 39266007 39266070 -127384226 + PB1D7 SINE Alu 1 63 -57 4 884 273 231 0 0 chrX 39266254 39266319 -127383977 + L1MC4 LINE L1 7520 7584 -458 4 884 243 183 15 104 chrX 39266331 39266398 -127383898 + 4.5SRNA scRNA scRNA 28 88 -6 4 884 472 220 39 20 chrX 39266345 39266447 -127383849 + B1F2 SINE Alu 41 144 -5 4 884 361 176 55 0 chrX 39266490 39266581 -127383715 + L1MC4 LINE L1 7673 7768 -274 4 884 775 189 63 78 chrX 39266585 39266791 -127383505 - RLTR20B3 LTR ERVK -9 568 366 4 884 814 267 20 0 chrX 39266831 39267026 -127383270 + B3 SINE B2 3 201 -15 4 884 265 54 0 0 chrX 39267078 39267115 -127383181 - Lx LINE L1 -804 5850 5814 4 884 475 153 54 2 chrX 39267115 39267241 -127383055 + Lx2B LINE L1 6844 6943 -57 4 884 337 211 53 43 chrX 39267249 39267339 -127382957 + B1F2 SINE Alu 1 91 -58 4 884 787 194 61 6 chrX 39267339 39267417 -127382879 - RMER4A LTR ERVK -2 464 385 4 884 2959 32 0 3 chrX 39267417 39267764 -127382532 + ORR1A0 LTR MaLR 1 346 0 4 884 787 194 61 6 chrX 39267764 39267866 -127382430 - RMER4A LTR ERVK -82 384 276 4 884 1234 34 0 14 chrX 39268047 39268195 -127382101 - B1_Mus1 SINE Alu -1 147 2 4 884 474 33 0 0 chrX 39268504 39268564 -127381732 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 4 884 225 0 0 0 chrX 39269256 39269281 -127381015 + (A)n Simple_repeat Simple_repeat 1 25 0 4 884 306 333 129 44 chrX 39270902 39271244 -127379052 + Helitron1Na_Mam RC Helitron 451 821 -241 4 884 304 173 93 0 chrX 39271256 39271331 -127378965 + Helitron1Nb_Mam RC Helitron 959 1040 -76 4 884 790 208 0 7 chrX 39271566 39271716 -127378580 + B1_Mur3 SINE Alu 1 149 0 4 884 404 204 202 9 chrX 39271754 39271863 -127378433 - RSINE1 SINE B4 -33 132 3 4 884 384 22 0 0 chrX 39271870 39271915 -127378381 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 884 446 294 89 30 chrX 39272050 39272218 -127378078 - B4A SINE B4 -47 245 68 4 884 367 310 64 96 chrX 39272586 39272700 -127377596 - RSINE1 SINE B4 -12 153 41 4 884 1580 31 0 25 chrX 39272700 39272898 -127377398 - B2_Mm1a SINE B2 0 193 1 4 884 367 310 64 96 chrX 39272898 39272940 -127377356 - RSINE1 SINE B4 -125 40 2 4 884 274 312 82 9 chrX 39273531 39273574 -127376722 - MER20 DNA MER1_type -6 213 172 4 884 279 0 0 0 chrX 39273574 39273605 -127376691 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 884 274 312 82 9 chrX 39273605 39273671 -127376625 - MER20 DNA MER1_type -48 171 97 4 884 423 0 0 0 chrX 39273673 39273720 -127376576 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 884 250 86 0 0 chrX 39274961 39274996 -127375300 - ORR1C2 LTR MaLR 0 384 350 4 884 4464 205 37 52 chrX 39274997 39276063 -127374233 - ORR1C2-int LTR MaLR 0 1370 321 4 884 1102 29 0 0 chrX 39276074 39276210 -127374086 + L1_Mus2 LINE L1 6166 6301 -265 4 884 868 51 110 0 chrX 39276218 39276336 -127373960 - B2_Mm2 SINE B2 -64 131 1 4 884 326 258 111 63 chrX 39277037 39277148 -127373148 + L1MEe LINE L1 933 1055 -3799 4 884 2224 48 0 0 chrX 39277148 39277417 -127372879 + L1_Mus1 LINE L1 6299 6567 0 4 884 326 258 111 63 chrX 39277417 39277495 -127372801 + L1MEe LINE L1 1056 1131 -3723 4 884 302 80 20 0 chrX 39277497 39277547 -127372749 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 884 469 270 6 86 chrX 39278446 39278608 -127371688 + RSINE1 SINE B4 15 163 -2 4 884 285 29 0 0 chrX 39278628 39278662 -127371634 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 4 884 724 215 43 48 chrX 39279200 39279386 -127370910 + B3 SINE B2 29 213 -3 4 884 701 238 7 0 chrX 39279403 39279550 -127370746 + B1_Mur3 SINE Alu 1 148 -1 4 884 24 53 0 0 chrX 39279559 39279597 -127370699 + AT_rich Low_complexity Low_complexity 1 38 0 4 884 1225 48 0 0 chrX 39279778 39279925 -127370371 - B1_Mus2 SINE Alu 0 147 1 4 884 252 77 0 0 chrX 39280635 39280674 -127369622 + (A)n Simple_repeat Simple_repeat 1 39 0 4 884 809 138 0 0 chrX 39280835 39280965 -127369331 + B3 SINE B2 1 130 -86 4 884 207 0 0 0 chrX 39281000 39281023 -127369273 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 4 884 985 69 0 14 chrX 39281127 39281274 -127369022 + B2_Mm1t SINE B2 49 193 0 4 884 423 211 35 35 chrX 39281369 39281482 -127368814 - MTD LTR MaLR -306 113 1 4 884 2051 117 62 0 chrX 39281656 39281964 -127368332 + ORR1A2 LTR MaLR 1 327 0 4 884 467 254 136 0 chrX 39281982 39282100 -127368196 - B1_Mur1 SINE Alu -15 134 1 4 884 612 164 0 43 chrX 39282130 39282207 -127368089 + B1_Mur4 SINE Alu 2 78 -72 4 884 3904 34 46 46 chrX 39282207 39282726 -127367570 - MURVY-LTR LTR ERV1 0 519 1 5 884 612 164 0 43 chrX 39282726 39282763 -127367533 + B1_Mur4 SINE Alu 79 111 -39 4 884 2414 167 71 76 chrX 39282767 39283332 -127366964 + RMER15 LTR ERVL 14 575 0 5 884 2222 97 7 0 chrX 39283370 39283680 -127366616 + Lx2 LINE L1 6685 6996 -1 5 884 25 31 0 0 chrX 39283680 39283712 -127366584 + AT_rich Low_complexity Low_complexity 1 32 0 5 884 306 239 214 11 chrX 39283992 39284031 -127366265 + B3 SINE B2 3 47 -169 5 884 4764 86 5 2 chrX 39284031 39284663 -127365633 + L1_Mus3 LINE L1 5999 6632 -6 5 884 306 239 214 11 chrX 39284663 39284801 -127365495 + B3 SINE B2 48 215 -1 5 884 625 214 77 7 chrX 39284828 39284999 -127365297 + B3 SINE B2 1 185 -10 5 884 2508 96 30 138 chrX 39285031 39285298 -127364998 + RLTR9B2 LTR ERVK 1 261 -159 5 884 1140 75 0 0 chrX 39285298 39285445 -127364851 + B1_Mm SINE Alu 1 147 0 5 884 2508 96 30 138 chrX 39285445 39285648 -127364648 + RLTR9B2 LTR ERVK 262 420 0 5 884 942 271 63 8 chrX 39285687 39285940 -127364356 + B4A SINE B4 25 291 -1 5 884 1148 82 0 0 chrX 39287172 39287318 -127362978 - B1_Mus2 SINE Alu -1 146 1 5 884 225 0 0 0 chrX 39287329 39287354 -127362942 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 884 428 223 36 173 chrX 39287532 39287700 -127362596 - B1_Mur1 SINE Alu -2 147 3 5 884 320 241 138 12 chrX 39287785 39287945 -127362351 + L1MD LINE L1 2439 2618 -3528 5 884 1373 84 5 35 chrX 39287945 39288143 -127362153 + B2_Mm1t SINE B2 2 193 0 5 884 326 162 56 6 chrX 39288164 39288325 -127361971 + (TA)n Simple_repeat Simple_repeat 2 170 0 5 884 304 345 67 50 chrX 39288550 39288926 -127361370 + L1M5 LINE L1 2699 3080 -3066 5 884 365 331 15 51 chrX 39289011 39289148 -127361148 + ID_B1 SINE B4 2 133 -91 5 884 405 0 0 0 chrX 39289162 39289207 -127361089 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 884 1647 143 121 25 chrX 39289223 39289545 -127360751 - RMER1A Other Other -12 1018 666 5 884 424 195 0 0 chrX 39289546 39289623 -127360673 + ID_B1 SINE B4 134 210 -14 5 884 198 0 0 0 chrX 39289623 39289645 -127360651 + (CAA)n Simple_repeat Simple_repeat 3 24 0 5 884 584 235 150 21 chrX 39289855 39290042 -127360254 + B3A SINE B2 2 212 -4 5 884 634 245 7 14 chrX 39290157 39290298 -127359998 + B3 SINE B2 1 140 -76 5 884 432 80 310 26 chrX 39290298 39290414 -127359882 - B2_Mm2 SINE B2 0 195 47 5 884 1129 107 11 0 chrX 39290484 39290661 -127359635 - B2_Mm1t SINE B2 -14 179 1 5 884 1042 327 52 32 chrX 39290791 39291410 -127358886 - ERVL-E-int LTR ERVL -1085 4582 3981 5 884 185 178 22 0 chrX 39291573 39291618 -127358678 + T-rich Low_complexity Low_complexity 4 49 0 5 884 372 94 0 0 chrX 39291609 39291662 -127358634 + (CCCCCT)n Simple_repeat Simple_repeat 5 57 0 5 884 508 211 0 92 chrX 39291662 39291803 -127358493 - B1_Mur4 SINE Alu -7 143 16 5 884 458 316 43 14 chrX 39292236 39292374 -127357922 - ID_B1 SINE B4 -61 163 22 5 884 721 98 191 24 chrX 39292416 39292542 -127357754 - B1_Mm SINE Alu 0 147 1 5 884 10804 3 0 0 chrX 39292560 39294437 -127355859 - L1Md_A LINE L1 0 6582 4706 5 884 1996 127 47 9 chrX 39294522 39294863 -127355433 + ORR1B1 LTR MaLR 41 394 0 5 884 499 211 251 23 chrX 39295066 39295241 -127355055 - B3 SINE B2 0 216 2 5 884 560 278 95 0 chrX 39295338 39295507 -127354789 + B3A SINE B2 4 188 -10 5 884 412 238 98 10 chrX 39295517 39295619 -127354677 + PB1D9 SINE Alu 3 113 -7 5 884 915 142 211 22 chrX 39296099 39296279 -127354017 + B3 SINE B2 1 214 -2 5 884 1228 39 26 0 chrX 39296343 39296496 -127353800 - L1_Mus1 LINE L1 0 6567 6411 5 884 591 233 25 19 chrX 39296528 39296690 -127353606 - RMER5 LTR ERV1 -28 506 344 5 884 837 239 96 51 chrX 39296728 39296844 -127353452 - RMER5 LTR ERV1 -153 381 263 5 884 1490 64 5 0 chrX 39296844 39297031 -127353265 - B2_Mm1a SINE B2 -5 188 1 5 884 837 239 96 51 chrX 39297031 39297249 -127353047 - RMER5 LTR ERV1 -272 262 32 5 884 2717 168 81 41 chrX 39297386 39298044 -127352252 + RMER6C LTR ERVK 1 684 -6 5 884 3825 91 165 2 chrX 39298059 39298642 -127351654 - RLTR33 LTR ERVK 0 678 1 5 884 357 286 17 26 chrX 39298793 39298908 -127351388 + B1F SINE Alu 35 148 -1 5 884 742 84 8 8 chrX 39299367 39299487 -127350809 - URR1B DNA MER1_type 0 225 106 5 884 24 32 0 0 chrX 39300075 39300106 -127350190 + AT_rich Low_complexity Low_complexity 1 31 0 5 884 251 259 0 0 chrX 39300179 39300237 -127350059 - ID_B1 SINE B4 -86 138 81 5 884 605 163 0 0 chrX 39300266 39300364 -127349932 - B1_Mur3 SINE Alu -10 139 42 5 884 600 84 0 0 chrX 39301333 39301416 -127348880 + (TGG)n Simple_repeat Simple_repeat 2 84 0 5 884 799 76 16 48 chrX 39301416 39301541 -127348755 + B1_Mur4 SINE Alu 17 137 -13 5 884 221 0 0 33 chrX 39301541 39301571 -127348725 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 5 884 564 213 129 22 chrX 39301668 39301846 -127348450 + B3A SINE B2 2 198 0 5 884 760 202 6 24 chrX 39301966 39302133 -127348163 - MER5A DNA MER1_type -23 166 3 5 884 1692 132 4 16 chrX 39302446 39302700 -127347596 + MurERV4-int LTR ERVK 2830 3080 -2180 5 884 924 115 29 82 chrX 39302774 39302867 -127347429 + MurERV4-int LTR ERVK 5087 5181 -79 5 884 1657 31 0 0 chrX 39302867 39303059 -127347237 - B2_Mm1a SINE B2 0 193 2 5 884 924 115 29 82 chrX 39303059 39303136 -127347160 + MurERV4-int LTR ERVK 5182 5248 -12 5 884 1610 189 26 20 chrX 39303150 39303495 -127346801 + RMER4A LTR ERVK 6 352 -114 5 884 552 219 15 15 chrX 39303530 39303660 -127346636 + RMER4A LTR ERVK 337 466 0 5 884 406 328 0 15 chrX 39303820 39303953 -127346343 - RSINE1 SINE B4 -28 137 7 5 884 530 246 36 7 chrX 39303986 39304125 -127346171 - ID_B1 SINE B4 0 224 82 5 884 486 241 17 33 chrX 39304441 39304561 -127345735 - PB1D9 SINE Alu -2 118 1 5 884 401 118 308 60 chrX 39304578 39304695 -127345601 - B2_Mm2 SINE B2 -3 192 47 5 884 1088 102 30 0 chrX 39304765 39304931 -127345365 - B2_Mm1t SINE B2 -22 171 1 5 884 1276 97 0 6 chrX 39305051 39305227 -127345069 + B2_Mm2 SINE B2 2 176 -19 5 884 429 20 0 0 chrX 39305228 39305278 -127345018 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 884 339 253 11 33 chrX 39305497 39305587 -127344709 + MLT1D LTR MaLR 1 88 -417 5 884 3845 58 10 2 chrX 39305900 39306380 -127343916 - L1_Mus1 LINE L1 0 6567 6084 5 884 519 239 55 25 chrX 39306391 39306554 -127343742 + MLT1D LTR MaLR 338 505 0 5 884 278 369 27 54 chrX 39307483 39307669 -127342627 - ORR1E LTR MaLR -157 202 22 5 884 544 275 92 85 chrX 39307623 39307929 -127342367 + LTR16E1 LTR ERVL 231 538 0 5 884 180 77 0 0 chrX 39308232 39308258 -127342038 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 884 180 0 0 0 chrX 39308269 39308289 -127342007 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 884 672 289 40 20 chrX 39308318 39308516 -127341780 - B3 SINE B2 -14 202 1 5 884 288 287 59 0 chrX 39308961 39309062 -127341234 + U6 snRNA snRNA 1 107 0 5 884 381 306 76 22 chrX 39309073 39309350 -127340946 + L1MA4 LINE L1 2575 2866 -3277 5 884 318 283 18 9 chrX 39309352 39309466 -127340830 + Lx9 LINE L1 7374 7488 -156 5 884 237 111 0 0 chrX 39309651 39309687 -127340609 + URR1B DNA MER1_type 150 185 -40 5 884 417 39 0 0 chrX 39309687 39309738 -127340558 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 884 1054 62 144 0 chrX 39309738 39309898 -127340398 - B2_Mm1t SINE B2 -10 183 1 5 884 550 254 51 37 chrX 39310002 39310219 -127340077 + L1_Mur2 LINE L1 4121 4340 -1537 5 884 306 273 148 0 chrX 39310233 39310361 -127339935 + B1F SINE Alu 1 147 -2 5 884 766 210 102 0 chrX 39310416 39310573 -127339723 + B3 SINE B2 2 174 -42 5 884 556 261 381 9 chrX 39310573 39310892 -127339404 + L1MA4 LINE L1 5488 5925 -375 5 884 262 320 144 53 chrX 39311113 39311245 -127339051 + RSINE1 SINE B4 3 146 -19 5 884 860 90 0 0 chrX 39311304 39311426 -127338870 + B2_Mm2 SINE B2 2 123 -72 5 884 7930 109 20 4 chrX 39311426 39312587 -127337709 + Lx2 LINE L1 5818 6996 -1 5 884 711 206 0 30 chrX 39312587 39312752 -127337544 + B2_Mm2 SINE B2 31 190 -5 5 884 641 220 0 14 chrX 39313146 39313289 -127337007 + B1_Mur1 SINE Alu 9 149 0 5 884 204 67 0 0 chrX 39313364 39313394 -127336902 + (T)n Simple_repeat Simple_repeat 1 30 0 5 884 441 54 0 0 chrX 39313693 39313749 -127336547 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 884 759 236 38 33 chrX 39314360 39314570 -127335726 + ID_B1 SINE B4 4 214 -10 5 884 230 402 0 0 chrX 39314672 39314754 -127335542 + ID4_ SINE ID 2 83 0 5 884 516 16 0 0 chrX 39315094 39315155 -127335141 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 884 917 137 13 20 chrX 39315172 39315321 -127334975 - B1_Mur2 SINE Alu -1 148 1 5 884 964 223 144 153 chrX 39315434 39315885 -127334411 + MT2A LTR ERVL 1 447 -86 5 884 597 64 0 0 chrX 39315887 39315965 -127334331 + (TA)n Simple_repeat Simple_repeat 2 79 0 5 884 871 249 5 15 chrX 39315965 39316161 -127334135 - B3 SINE B2 -22 194 1 5 884 360 0 0 0 chrX 39316179 39316219 -127334077 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 884 249 241 0 0 chrX 39316301 39316359 -127333937 - MIR SINE MIR -23 239 182 5 884 4215 76 5 33 chrX 39317156 39317739 -127332557 - RMER2 LTR ERV1 0 567 1 5 884 406 282 81 0 chrX 39318085 39318234 -127332062 - B3A SINE B2 -5 193 33 5 884 1235 41 0 0 chrX 39318268 39318414 -127331882 - B1_Mm SINE Alu 0 147 2 5 884 255 103 0 0 chrX 39318464 39318503 -127331793 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 884 198 0 0 0 chrX 39318503 39318524 -127331772 + (GA)n Simple_repeat Simple_repeat 1 22 0 5 884 1645 133 29 32 chrX 39318524 39318835 -127331461 + RMER6A LTR ERVK 10 319 -437 5 884 428 0 19 0 chrX 39318835 39318887 -127331409 + (GA)n Simple_repeat Simple_repeat 1 53 0 6 884 1423 98 140 12 chrX 39318889 39319146 -127331150 + RMER6A LTR ERVK 467 756 0 5 884 215 307 76 34 chrX 39319254 39319372 -127330924 - BC1_Mm scRNA scRNA -13 139 17 6 884 295 241 0 25 chrX 39319307 39319388 -127330908 - B3A SINE B2 -119 79 1 6 884 455 254 325 14 chrX 39320645 39320857 -127329439 - B4 SINE B4 -14 278 1 6 110 984 47 0 0 chrX 39321597 39321725 -127328571 - B1_Mus2 SINE Alu 0 147 20 6 885 341 211 0 14 chrX 39321794 39321866 -127328430 + RMER5 LTR ERV1 449 519 -15 6 885 398 146 12 0 chrX 39321986 39322068 -127328228 + CT-rich Low_complexity Low_complexity 3 85 0 6 885 285 29 0 0 chrX 39322068 39322102 -127328194 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 885 243 0 0 0 chrX 39322102 39322128 -127328168 + (GA)n Simple_repeat Simple_repeat 1 27 0 6 885 1426 74 16 11 chrX 39322144 39322335 -127327961 + B2_Mm2 SINE B2 2 193 -2 6 885 294 335 89 17 chrX 39322523 39322702 -127327594 - L2a LINE L2 -241 3185 2994 6 885 752 114 91 8 chrX 39322884 39323016 -127327280 + B1_Mus1 SINE Alu 6 148 0 6 885 185 0 40 0 chrX 39323019 39323044 -127327252 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 885 576 271 27 38 chrX 39323351 39323535 -127326761 + B3A SINE B2 1 182 -16 6 885 180 0 0 0 chrX 39323844 39323864 -127326432 + (TC)n Simple_repeat Simple_repeat 1 20 0 6 885 234 81 0 0 chrX 39323874 39323911 -127326385 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 885 373 336 48 0 chrX 39323914 39324039 -127326257 + B1F1 SINE Alu 17 147 -2 6 885 1435 242 62 11 chrX 39324024 39324459 -127325837 - RMER5 LTR ERV1 -4 530 74 6 885 2333 194 111 27 chrX 39324506 39325090 -127325206 - Lx9 LINE L1 -7 7637 7005 6 885 374 284 85 14 chrX 39325179 39325434 -127324862 + L1MEe LINE L1 1335 1615 -4469 6 885 671 209 29 0 chrX 39325546 39325685 -127324611 - B1_Mur2 SINE Alu -1 148 6 6 885 605 229 15 0 chrX 39325793 39325924 -127324372 - B1_Mur2 SINE Alu -12 137 5 6 885 342 270 115 39 chrX 39326314 39326418 -127323878 + ID_B1 SINE B4 79 190 -34 6 885 276 250 75 64 chrX 39326337 39326431 -127323865 - YREP_Mm Unknown Unknown -1517 295 201 6 885 220 136 23 0 chrX 39326522 39326566 -127323730 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 6 885 343 198 34 34 chrX 39327510 39327599 -127322697 - RLTR23 LTR ERV1 -16 414 326 6 885 831 275 69 32 chrX 39327650 39328026 -127322270 + RLTR22_Mur LTR ERVK 415 804 -1044 6 885 295 290 28 18 chrX 39328091 39328200 -127322096 + RLTR22_Mur LTR ERVK 1590 1699 -149 6 885 1165 62 0 0 chrX 39328741 39328886 -127321410 + B1_Mm SINE Alu 1 145 -2 6 885 551 314 46 19 chrX 39329440 39329760 -127320536 + RLTR6-int LTR ERV1 1200 1497 -6281 6 885 268 299 73 6 chrX 39329808 39329986 -127320310 + RLTR6-int LTR ERV1 1544 1733 -3330 6 885 385 199 19 47 chrX 39330064 39330175 -127320121 + RLTR6-int LTR ERV1 2121 2225 -5553 6 885 321 326 27 27 chrX 39330184 39330332 -127319964 + RLTR6-int LTR ERV1 2876 3023 -4583 6 885 288 0 0 0 chrX 39330345 39330377 -127319919 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 885 1206 197 62 0 chrX 39330378 39330682 -127319614 + RCHARR1 DNA MER1_type 538 860 -114 6 885 673 236 7 0 chrX 39330684 39330824 -127319472 - B1_Mur1 SINE Alu -1 148 8 6 885 254 307 40 99 chrX 39330710 39330862 -127319434 - MT2B LTR ERVL -325 276 134 6 885 1074 76 14 0 chrX 39330873 39331017 -127319279 + B1_Mus1 SINE Alu 2 147 -1 6 885 1077 79 0 28 chrX 39331021 39331203 -127319093 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 6 885 490 286 8 0 chrX 39331236 39331369 -127318927 + RSINE1 SINE B4 4 137 -28 6 885 252 362 53 0 chrX 39331433 39331527 -127318769 + B1F SINE Alu 44 142 -7 6 885 1122 89 0 0 chrX 39331606 39331752 -127318544 + B1_Mus2 SINE Alu 1 146 -1 6 885 183 114 0 0 chrX 39331752 39331787 -127318509 + (CAAAC)n Simple_repeat Simple_repeat 5 39 0 6 885 637 185 77 0 chrX 39331789 39331919 -127318377 + B2_Mm2 SINE B2 45 184 -11 6 885 371 147 107 0 chrX 39331970 39332045 -127318251 - HAL1-3A_ME LINE L1 -840 2018 1936 6 885 1303 72 43 11 chrX 39332059 39332243 -127318053 + B2_Mm2 SINE B2 1 190 -5 6 885 305 307 0 81 chrX 39332319 39332443 -127317853 + B1_Mm SINE Alu 3 116 -31 6 885 793 242 4 112 chrX 39332443 39332520 -127317776 + L1MB8 LINE L1 5505 5570 -614 6 885 690 265 23 28 chrX 39332520 39332737 -127317559 - ID_B1 SINE B4 -8 216 1 6 885 793 242 4 112 chrX 39332737 39332910 -127317386 + L1MB8 LINE L1 5571 5728 -456 6 885 525 264 51 42 chrX 39332991 39333208 -127317088 + L1MB8 LINE L1 5716 5934 -244 6 885 486 0 0 0 chrX 39333465 39333519 -127316777 + (TCC)n Simple_repeat Simple_repeat 3 56 0 6 885 302 0 0 26 chrX 39333679 39333718 -127316578 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 6 885 555 269 8 0 chrX 39333833 39333963 -127316333 - RSINE1 SINE B4 -32 133 3 6 885 218 264 50 83 chrX 39334013 39334025 -127316271 - PB1D10 SINE Alu 0 117 5 6 885 334 260 9 48 chrX 39334025 39334130 -127316166 - ID_B1 SINE B4 -38 186 86 6 885 513 0 0 0 chrX 39334223 39334280 -127316016 + (TC)n Simple_repeat Simple_repeat 2 58 0 6 885 659 264 5 134 chrX 39334299 39334485 -127315811 - B3 SINE B2 -17 199 40 6 885 1146 90 0 0 chrX 39334485 39334630 -127315666 - B1_Mus2 SINE Alu -1 146 2 6 885 659 264 5 134 chrX 39334630 39334666 -127315630 - B3 SINE B2 -177 39 6 6 885 335 237 13 38 chrX 39334708 39334787 -127315509 - ID4_ SINE ID -6 77 1 6 885 814 216 79 20 chrX 39334867 39335070 -127315226 + B3 SINE B2 2 216 0 6 885 251 329 0 0 chrX 39335242 39335318 -127314978 + ID_B1 SINE B4 134 209 -15 6 885 306 312 118 9 chrX 39335347 39335457 -127314839 + PB1 SINE Alu 2 123 -4 6 885 805 179 0 0 chrX 39336443 39336583 -127313713 - B1_Mus2 SINE Alu -6 141 2 6 885 314 333 0 0 chrX 39336770 39336869 -127313427 + PB1D10 SINE Alu 1 99 -18 6 885 615 256 16 0 chrX 39337041 39337170 -127313126 + RSINE1 SINE B4 3 133 -32 6 885 255 93 0 0 chrX 39337199 39337242 -127313054 + (T)n Simple_repeat Simple_repeat 1 43 0 6 885 1141 49 35 0 chrX 39337242 39337385 -127312911 - B1_Mus1 SINE Alu 0 148 1 6 885 382 275 28 21 chrX 39337524 39337669 -127312627 + B1F SINE Alu 3 148 -1 6 885 246 286 36 0 chrX 39337682 39337738 -127312558 + ID SINE ID 5 62 -162 6 885 476 256 124 0 chrX 39337740 39337804 -127312492 + ID SINE ID 3 81 -143 6 885 218 329 21 146 chrX 39337804 39337874 -127312422 + B1F2 SINE Alu 1 64 -85 6 885 520 84 0 24 chrX 39337874 39337959 -127312337 + (CTA)n Simple_repeat Simple_repeat 1 83 0 6 885 218 319 28 130 chrX 39337959 39337996 -127312300 + B1F2 SINE Alu 65 97 -52 6 885 1330 84 6 22 chrX 39338027 39338209 -127312087 + B2_Mm1t SINE B2 1 179 -14 6 885 307 127 0 68 chrX 39338256 39338315 -127311981 + B2_Mm2 SINE B2 47 101 -94 6 885 189 0 0 0 chrX 39338343 39338364 -127311932 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 6 885 818 0 0 20 chrX 39338740 39338839 -127311457 + (TCTCCC)n Simple_repeat Simple_repeat 3 99 0 6 885 22 35 0 0 chrX 39339247 39339276 -127311020 + AT_rich Low_complexity Low_complexity 1 29 0 6 885 23 0 0 0 chrX 39339297 39339320 -127310976 + AT_rich Low_complexity Low_complexity 1 23 0 6 885 538 250 0 53 chrX 39339327 39339479 -127310817 + B1F2 SINE Alu 1 144 -5 6 885 1001 168 101 15 chrX 39339681 39339880 -127310416 - B3 SINE B2 0 216 1 6 885 543 178 8 61 chrX 39340139 39340271 -127310025 - Lx9 LINE L1 -16 7628 7504 6 885 189 0 0 0 chrX 39340276 39340297 -127309999 + (TA)n Simple_repeat Simple_repeat 2 22 0 6 885 526 101 21 73 chrX 39340317 39340413 -127309883 - Lx9 LINE L1 -718 6926 6836 6 885 228 122 0 0 chrX 39340413 39340454 -127309842 + (T)n Simple_repeat Simple_repeat 1 41 0 6 885 1275 27 0 0 chrX 39340456 39340603 -127309693 - B1_Mm SINE Alu 0 147 1 6 885 281 200 0 0 chrX 39340605 39340655 -127309641 - Lx9 LINE L1 -796 6848 6799 6 885 272 280 13 0 chrX 39340659 39340734 -127309562 + RSINE1 SINE B4 84 159 -6 6 885 47 0 0 0 chrX 39340886 39340933 -127309363 + AT_rich Low_complexity Low_complexity 1 47 0 6 885 612 256 0 21 chrX 39341043 39341183 -127309113 - ID_B1 SINE B4 -7 217 81 6 885 748 182 35 7 chrX 39341299 39341443 -127308853 + B1_Mur3 SINE Alu 2 149 0 6 885 185 178 0 22 chrX 39341448 39341494 -127308802 + GA-rich Low_complexity Low_complexity 3 47 0 6 885 459 308 0 0 chrX 39341499 39341619 -127308677 + B1_Mur2 SINE Alu 28 147 -2 6 885 409 288 52 29 chrX 39341916 39342052 -127308244 + ID_B1 SINE B4 86 224 0 6 885 38755 31 1 0 chrX 39342190 39348979 -127301317 - L1Md_T LINE L1 0 6585 1 6 885 333 232 33 74 chrX 39349008 39349129 -127301167 + MER102b DNA MER1_type 84 199 -142 6 885 732 274 14 36 chrX 39349313 39349533 -127300763 - ID_B1 SINE B4 -8 216 2 6 885 1904 216 40 2 chrX 39350108 39350503 -127299793 - MTD LTR MaLR -9 410 1 6 885 380 190 196 20 chrX 39350993 39351095 -127299201 + PB1D9 SINE Alu 1 120 0 6 885 978 82 15 22 chrX 39351117 39351254 -127299042 + B1_Mur4 SINE Alu 2 137 -13 6 885 605 121 224 0 chrX 39351688 39351804 -127298492 - B1_Mus1 SINE Alu -2 146 5 6 885 885 307 38 65 chrX 39351808 39351855 -127298441 + MTE2b LTR MaLR 7 53 -326 6 885 662 221 7 20 chrX 39351855 39352003 -127298293 + B1_Mur2 SINE Alu 2 147 -2 6 885 885 307 38 65 chrX 39352003 39352327 -127297969 + MTE2b LTR MaLR 54 368 -11 6 885 485 16 0 16 chrX 39352618 39352681 -127297615 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 885 530 250 89 13 chrX 39352892 39353050 -127297246 + B3A SINE B2 4 173 -25 6 885 575 169 280 19 chrX 39353117 39353274 -127297022 - B3 SINE B2 -16 200 3 6 885 461 216 72 0 chrX 39353299 39353410 -127296886 + B1_Mur1 SINE Alu 13 131 -18 6 885 729 0 0 0 chrX 39353410 39353491 -127296805 + (GAAA)n Simple_repeat Simple_repeat 1 81 0 6 885 1471 109 0 13 chrX 39353498 39353722 -127296574 + L1Md_F2 LINE L1 6354 6574 -8 7 885 1484 58 5 16 chrX 39353784 39353975 -127296321 - B2_Mm1a SINE B2 -3 190 2 7 885 3362 38 127 36 chrX 39354254 39354696 -127295600 + LTRIS_Mm LTR ERV1 1 482 0 7 885 267 303 66 0 chrX 39354725 39354801 -127295495 + ID4_ SINE ID 1 81 -2 7 885 507 268 14 21 chrX 39354980 39355121 -127295175 - ID_B1 SINE B4 -1 223 84 7 885 3557 65 9 13 chrX 39355172 39355638 -127294658 - L1_Mus2 LINE L1 -1 6565 6102 7 885 505 229 81 10 chrX 39355655 39355813 -127294483 - B3A SINE B2 -39 177 1 7 885 3530 20 5 0 chrX 39356260 39356654 -127293642 - MTA_Mm LTR MaLR 0 396 1 7 885 847 177 7 13 chrX 39356670 39356819 -127293477 + B1_Mur2 SINE Alu 2 149 0 7 885 677 251 6 79 chrX 39356895 39356929 -127293367 - RSINE1 SINE B4 0 165 142 7 885 3581 56 7 0 chrX 39356929 39357375 -127292921 + L1Md_F2 LINE L1 6132 6580 -2 7 885 677 251 6 79 chrX 39357375 39357517 -127292779 - RSINE1 SINE B4 -24 141 2 7 885 2401 117 70 8 chrX 39357733 39358120 -127292176 + Lx LINE L1 6244 6654 0 7 885 565 197 0 49 chrX 39359316 39359439 -127290857 + PB1D10 SINE Alu 1 117 0 7 885 249 57 0 0 chrX 39359745 39359780 -127290516 + (TTTC)n Simple_repeat Simple_repeat 1 35 0 7 885 6537 157 29 14 chrX 39359781 39361071 -127289225 - Lx4B LINE L1 0 7058 5671 7 885 407 219 18 37 chrX 39361074 39361183 -127289113 - RLTR23 LTR ERV1 0 430 324 7 885 983 274 58 24 chrX 39361239 39361617 -127288679 + RLTR22_Mur LTR ERVK 415 805 -1043 7 885 390 128 25 8 chrX 39362624 39362708 -127287588 - B2_Mm2 SINE B2 -65 133 46 7 885 1219 54 0 0 chrX 39363050 39363198 -127287098 + B1_Mus1 SINE Alu 1 148 0 7 885 229 89 44 0 chrX 39363203 39363248 -127287048 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 7 885 183 184 0 0 chrX 39364722 39364760 -127285536 + GA-rich Low_complexity Low_complexity 3 40 0 7 885 396 284 57 57 chrX 39364760 39364883 -127285413 + RSINE1 SINE B4 4 126 -39 7 885 28 0 0 0 chrX 39364883 39364911 -127285385 + AT_rich Low_complexity Low_complexity 1 28 0 7 885 627 283 37 9 chrX 39365001 39365215 -127285081 + ID_B1 SINE B4 2 221 -3 7 885 559 262 28 0 chrX 39365572 39365713 -127284583 + RSINE1 SINE B4 4 148 -17 7 885 249 83 0 0 chrX 39365769 39365805 -127284491 + (A)n Simple_repeat Simple_repeat 1 36 0 7 885 482 297 16 4 chrX 39365906 39366042 -127284254 + B1F1 SINE Alu 1 134 -15 7 885 267 347 30 40 chrX 39366290 39366488 -127283808 + LTR33 LTR ERVL 264 459 -56 7 885 640 175 119 0 chrX 39366505 39366631 -127283665 + B1_Mur2 SINE Alu 5 145 -4 7 885 414 0 0 0 chrX 39366840 39366886 -127283410 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 885 255 61 0 0 chrX 39366892 39366925 -127283371 + (GGGA)n Simple_repeat Simple_repeat 1 33 0 7 885 583 237 144 6 chrX 39366965 39367139 -127283157 - ID_B1 SINE B4 -9 215 18 7 885 510 215 7 84 chrX 39367234 39367376 -127282920 - B1F SINE Alu -1 148 18 7 885 405 225 12 3 chrX 39367433 39367545 -127282751 - ID4 SINE ID -27 125 11 7 885 259 292 85 0 chrX 39367596 39367702 -127282594 + PB1D10 SINE Alu 1 115 -2 7 885 1117 135 10 54 chrX 39368442 39368646 -127281650 - B2_Mm2 SINE B2 0 195 1 7 885 629 227 15 0 chrX 39368847 39368979 -127281317 - B3 SINE B2 -77 139 6 7 885 308 291 8 41 chrX 39369018 39369140 -127281156 - PB1D7 SINE Alu -2 118 1 7 885 360 0 0 0 chrX 39369297 39369337 -127280959 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 885 444 37 0 0 chrX 39369337 39369390 -127280906 + (GA)n Simple_repeat Simple_repeat 1 54 0 7 885 341 311 0 57 chrX 39369473 39369613 -127280683 + B1F SINE Alu 17 148 -1 7 885 754 219 14 7 chrX 39369632 39369779 -127280517 + B1_Mur1 SINE Alu 2 149 0 7 885 1209 68 0 0 chrX 39370046 39370194 -127280102 - B1_Mus1 SINE Alu 0 148 1 7 885 798 237 34 12 chrX 39370224 39370426 -127279870 - B3A SINE B2 -2 214 4 7 885 1195 75 0 0 chrX 39370453 39370600 -127279696 - B1_Mus1 SINE Alu 0 148 2 7 885 348 270 39 39 chrX 39370651 39370755 -127279541 - B1F SINE Alu -10 139 36 7 885 883 237 48 48 chrX 39370837 39371045 -127279251 - B3 SINE B2 -6 210 3 7 885 355 155 0 0 chrX 39372093 39372151 -127278145 - MT2A LTR ERVL -475 58 1 7 885 244 182 107 83 chrX 39372464 39372548 -127277748 + RMER15 LTR ERVL 371 456 -119 7 885 335 142 160 40 chrX 39373126 39373243 -127277053 - B2_Mm2 SINE B2 0 193 47 7 885 1254 97 6 17 chrX 39373294 39373473 -127276823 - B2_Mm1t SINE B2 -14 179 3 7 885 279 302 33 33 chrX 39373908 39374028 -127276268 + RMER15 LTR ERVL 453 572 -3 7 885 458 339 26 48 chrX 39374028 39374255 -127276041 - LTR33 LTR ERVL -292 223 2 7 885 637 255 7 14 chrX 39374377 39374524 -127275772 - B1_Mur2 SINE Alu -2 147 2 7 885 682 270 31 152 chrX 39374753 39375142 -127275154 - MTE2a LTR MaLR -37 342 1 7 885 448 229 27 9 chrX 39375142 39375246 -127275050 + B1F2 SINE Alu 22 127 -22 7 885 395 273 102 0 chrX 39375735 39375922 -127274374 + L1MB7 LINE L1 5259 5464 -714 7 885 396 158 0 0 chrX 39375939 39376015 -127274281 + GA-rich Low_complexity Low_complexity 2 77 0 7 885 214 257 0 2 chrX 39376043 39376106 -127274190 + PB1D9 SINE Alu 54 118 -2 7 885 870 223 118 33 chrX 39376302 39376608 -127273688 + L1MB7 LINE L1 5540 5871 -313 7 885 823 286 26 142 chrX 39376614 39377029 -127273267 + MTE2a LTR MaLR 1 367 -12 7 885 225 0 0 0 chrX 39377033 39377058 -127273238 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 885 484 250 124 11 chrX 39377058 39377270 -127273026 + L1MB7 LINE L1 5875 6108 -76 7 885 933 196 34 0 chrX 39377336 39377515 -127272781 + Lx4B LINE L1 5482 5666 -211 7 885 267 241 73 65 chrX 39377572 39377696 -127272600 - RLTR22_Mus LTR ERVK -142 1666 1542 7 885 1017 277 59 19 chrX 39377761 39378136 -127272160 - RLTR22_Mur LTR ERVK -1044 804 415 7 885 434 209 18 37 chrX 39378192 39378301 -127271995 + RLTR23 LTR ERV1 324 430 0 7 885 6456 162 29 14 chrX 39378304 39379594 -127270702 + Lx4B LINE L1 5671 7058 0 7 885 249 57 0 0 chrX 39379595 39379630 -127270666 + (GAAA)n Simple_repeat Simple_repeat 1 35 0 7 885 565 197 0 49 chrX 39379936 39380059 -127270237 - PB1D10 SINE Alu 0 117 1 7 885 22 0 0 0 chrX 39381268 39381290 -127269006 + AT_rich Low_complexity Low_complexity 1 22 0 7 885 480 324 48 0 chrX 39381464 39381609 -127268687 - RSINE1 SINE B4 -4 161 10 7 885 333 270 24 94 chrX 39381897 39382024 -127268272 - PB1D9 SINE Alu -2 118 1 7 885 887 62 23 0 chrX 39382049 39382178 -127268118 - B2_Mm2 SINE B2 -14 181 50 7 885 276 30 0 0 chrX 39382261 39382294 -127268002 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 885 1229 104 16 21 chrX 39382321 39382507 -127267789 + B2_Mm2 SINE B2 2 186 -9 7 885 880 204 43 34 chrX 39382516 39382536 -127267760 - B3 SINE B2 -5 211 196 7 885 1350 109 5 5 chrX 39382536 39382729 -127267567 - B2_Mm1a SINE B2 0 193 1 7 885 880 204 43 34 chrX 39382729 39382916 -127267380 - B3 SINE B2 -21 195 2 7 885 354 274 111 0 chrX 39382942 39383059 -127267237 - ID_B1 SINE B4 -12 212 83 7 885 339 298 77 0 chrX 39383556 39383660 -127266636 - PB1D10 SINE Alu -1 116 5 7 885 1036 222 0 10 chrX 39384011 39384220 -127266076 + B3 SINE B2 4 210 -6 7 885 1682 211 53 3 chrX 39384287 39384684 -127265612 - MTD LTR MaLR -14 405 3 7 885 270 196 0 0 chrX 39384714 39384760 -127265536 + ID SINE ID 28 73 -151 7 885 246 125 0 0 chrX 39385165 39385213 -127265083 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 7 885 306 286 28 9 chrX 39385825 39385931 -127264365 - PB1D7 SINE Alu -7 113 6 7 885 27 0 0 0 chrX 39385955 39385982 -127264314 + AT_rich Low_complexity Low_complexity 1 27 0 7 885 953 242 56 9 chrX 39386010 39386223 -127264073 - ID_B1 SINE B4 -1 223 1 7 885 328 278 52 0 chrX 39386228 39386325 -127263971 - PB1D7 SINE Alu -2 118 17 7 885 868 297 58 37 chrX 39386734 39387115 -127263181 - CR1_Mam LINE CR1 -1526 678 290 7 885 262 253 24 37 chrX 39387292 39387374 -127262922 - ID4_ SINE ID 0 83 3 7 885 373 353 84 43 chrX 39387709 39388008 -127262288 + Lx8 LINE L1 6918 7228 -245 7 885 2050 115 12 9 chrX 39388013 39388339 -127261957 - IAPLTR1a_Mm LTR ERVK -10 327 1 7 885 226 246 45 15 chrX 39388576 39388642 -127261654 - B3 SINE B2 -10 206 139 7 885 226 240 0 0 chrX 39388644 39388694 -127261602 - B2_Mm2 SINE B2 -93 102 53 7 885 1091 35 0 0 chrX 39388745 39388886 -127261410 + B1_Mus1 SINE Alu 6 146 -2 7 885 402 21 0 0 chrX 39388886 39388933 -127261363 + (TAA)n Simple_repeat Simple_repeat 2 48 0 7 885 1250 48 0 0 chrX 39389238 39389385 -127260911 + B1_Mus1 SINE Alu 1 147 -1 7 885 998 270 65 16 chrX 39389873 39390242 -127260054 - L1MC1 LINE L1 -241 6092 5706 7 885 324 336 9 26 chrX 39390243 39390356 -127259940 + ID_B1 SINE B4 74 184 -40 7 885 501 261 7 21 chrX 39390357 39390498 -127259798 - L1MC1 LINE L1 -622 5722 5584 7 885 21 0 0 0 chrX 39391114 39391135 -127259161 + AT_rich Low_complexity Low_complexity 1 21 0 7 885 503 212 132 9 chrX 39391163 39391277 -127259019 - B3A SINE B2 -61 137 10 7 885 341 323 0 16 chrX 39391479 39391608 -127258688 - L1MC LINE L1 -771 5562 5436 7 885 1124 95 0 0 chrX 39391797 39391944 -127258352 - B1_Mus1 SINE Alu 0 148 2 7 885 771 139 0 8 chrX 39391944 39392067 -127258229 - B1_Mus1 SINE Alu -16 132 11 7 885 234 0 0 0 chrX 39392081 39392107 -127258189 + (T)n Simple_repeat Simple_repeat 1 26 0 7 885 235 231 108 0 chrX 39392228 39392293 -127258003 - L1MC LINE L1 -912 5234 5163 7 885 323 248 11 69 chrX 39392295 39392393 -127257903 - ID4 SINE ID -59 93 1 8 885 368 304 98 0 chrX 39392401 39392513 -127257783 - PB1 SINE Alu -2 125 3 8 885 1224 14 21 0 chrX 39392584 39392727 -127257569 + B1_Mm SINE Alu 2 147 0 8 885 900 207 64 5 chrX 39392754 39392958 -127257338 + B3 SINE B2 1 216 0 8 885 422 190 130 0 chrX 39393143 39393243 -127257053 - B3 SINE B2 -5 211 99 8 885 1023 61 0 0 chrX 39393243 39393374 -127256922 - B1_Mus2 SINE Alu -15 132 2 8 885 694 239 38 49 chrX 39393441 39393626 -127256670 - B3A SINE B2 -15 183 1 8 885 479 51 39 0 chrX 39393651 39393729 -127256567 + MT-int LTR MaLR 969 1049 -49 8 885 192 97 0 0 chrX 39393729 39393760 -127256536 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 8 885 207 0 0 0 chrX 39393788 39393811 -127256485 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 8 885 271 298 56 40 chrX 39393845 39393971 -127256325 - ID_B1 SINE B4 -6 218 91 8 885 428 270 151 0 chrX 39394304 39394430 -127255866 - ID_B1 SINE B4 -73 151 7 8 885 280 307 159 0 chrX 39394446 39394534 -127255762 - PB1D10 SINE Alu -10 107 6 8 885 398 302 35 0 chrX 39394576 39394692 -127255604 + PB1D7 SINE Alu 1 120 0 8 885 417 287 35 0 chrX 39394695 39394810 -127255486 + ID_B1 SINE B4 85 203 -21 8 885 296 333 62 0 chrX 39394810 39394821 -127255475 + B1F2 SINE Alu 4 137 -12 8 885 468 0 0 0 chrX 39394921 39394973 -127255323 + (TA)n Simple_repeat Simple_repeat 1 52 0 8 885 252 0 0 0 chrX 39395074 39395102 -127255194 + (TA)n Simple_repeat Simple_repeat 1 28 0 8 885 261 0 0 0 chrX 39395113 39395142 -127255154 + (GA)n Simple_repeat Simple_repeat 1 29 0 8 885 333 247 13 13 chrX 39395158 39395236 -127255060 - B3A SINE B2 -129 87 10 8 885 349 255 0 45 chrX 39395244 39395355 -127254941 - ID_B1 SINE B4 0 224 119 8 885 659 284 26 8 chrX 39395378 39395612 -127254684 - L1ME2z LINE L1 -532 5912 5675 8 885 399 41 0 0 chrX 39395695 39395744 -127254552 + (TC)n Simple_repeat Simple_repeat 1 49 0 8 885 445 237 0 0 chrX 39395746 39395839 -127254457 - RSINE1 SINE B4 -70 95 3 8 885 1263 110 39 0 chrX 39396220 39396402 -127253894 - B2_Mm2 SINE B2 -5 190 2 8 885 1163 68 0 0 chrX 39396429 39396575 -127253721 - B1_Mus1 SINE Alu -1 147 2 8 885 1232 40 0 20 chrX 39396759 39396910 -127253386 + B1_Mus1 SINE Alu 1 148 0 8 885 216 0 0 0 chrX 39396910 39396934 -127253362 + (A)n Simple_repeat Simple_repeat 1 24 0 8 885 283 235 58 23 chrX 39396988 39397075 -127253221 + ID_B1 SINE B4 4 93 -131 8 885 1249 34 0 0 chrX 39397129 39397275 -127253021 + B1_Mus1 SINE Alu 3 148 0 8 885 355 209 0 149 chrX 39397282 39397334 -127252962 + RSINE1 SINE B4 44 85 -80 8 885 3246 30 40 10 chrX 39397334 39397733 -127252563 + IAPLTR2a LTR ERVK 1 411 0 8 885 355 209 0 149 chrX 39397733 39397787 -127252509 + RSINE1 SINE B4 86 134 -31 8 885 24 0 0 0 chrX 39397787 39397811 -127252485 + AT_rich Low_complexity Low_complexity 1 24 0 8 885 232 328 0 0 chrX 39397844 39397905 -127252391 + ID_B1 SINE B4 135 195 -29 8 885 431 257 9 0 chrX 39397987 39398092 -127252204 - ID_B1 SINE B4 -118 106 1 8 885 283 288 0 0 chrX 39398288 39398368 -127251928 + PB1D10 SINE Alu 2 81 -36 8 885 433 248 66 0 chrX 39398555 39398676 -127251620 + RSINE1 SINE B4 27 155 -10 8 885 681 235 47 41 chrX 39398703 39398872 -127251424 + B3A SINE B2 1 170 -28 8 885 323 253 13 0 chrX 39398889 39398964 -127251332 + PB1D9 SINE Alu 2 77 -43 8 885 1353 60 43 16 chrX 39398965 39399150 -127251146 + B2_Mm2 SINE B2 2 191 -4 8 885 1098 65 0 0 chrX 39399156 39399294 -127251002 + B1_Mus2 SINE Alu 2 139 -8 8 885 240 146 0 111 chrX 39399352 39399406 -127250890 + B1_Mur1 SINE Alu 97 144 -5 8 885 761 256 59 5 chrX 39399415 39399619 -127250677 + B3 SINE B2 2 216 0 8 885 27 0 0 0 chrX 39399619 39399646 -127250650 + AT_rich Low_complexity Low_complexity 1 27 0 8 885 762 297 66 122 chrX 39399700 39400416 -127249880 + Charlie2a DNA MER1_type 1464 2139 -722 8 885 843 189 99 25 chrX 39400423 39400624 -127249672 + B3 SINE B2 1 216 0 8 885 444 244 97 114 chrX 39400656 39400696 -127249600 + B3A SINE B2 3 40 -158 8 885 874 146 35 7 chrX 39400696 39400841 -127249455 + B1_Mur2 SINE Alu 1 149 0 8 885 444 244 97 114 chrX 39400841 39400976 -127249320 + B3A SINE B2 41 175 -23 8 885 306 0 0 0 chrX 39400980 39401014 -127249282 + (CA)n Simple_repeat Simple_repeat 2 35 0 8 885 231 219 38 76 chrX 39401015 39401094 -127249202 + Charlie2a DNA MER1_type 2123 2198 -663 8 885 447 286 45 0 chrX 39401165 39401277 -127249019 - ID_B1 SINE B4 -19 205 89 8 885 270 182 0 0 chrX 39401312 39401378 -127248918 + A-rich Low_complexity Low_complexity 1 66 0 8 885 1336 59 16 5 chrX 39401390 39401578 -127248718 + B2_Mm2 SINE B2 3 192 -3 8 885 1108 63 21 0 chrX 39401583 39401726 -127248570 + B1_Mus2 SINE Alu 1 146 -1 8 885 489 115 0 0 chrX 39401735 39401813 -127248483 + (GAAAA)n Simple_repeat Simple_repeat 3 80 0 8 885 526 309 110 50 chrX 39401830 39401950 -127248346 - MLT1A LTR MaLR -13 361 232 8 885 4983 38 3 2 chrX 39401950 39402536 -127247760 + LTRIS_Mus LTR ERV1 1 587 0 8 885 526 309 110 50 chrX 39402536 39402752 -127247544 - MLT1A LTR MaLR -143 231 6 8 885 1375 57 57 0 chrX 39402900 39403076 -127247220 - B2_Mm2 SINE B2 -9 186 1 8 885 642 189 74 22 chrX 39403087 39403222 -127247074 - B1_Mur2 SINE Alu -7 142 1 8 885 466 297 26 51 chrX 39403224 39403380 -127246916 - ID_B1 SINE B4 0 224 73 8 885 461 239 17 25 chrX 39403439 39403559 -127246737 + ID_B1 SINE B4 106 224 0 8 885 1145 75 0 0 chrX 39403611 39403757 -127246539 + B1_Mus2 SINE Alu 2 147 0 8 885 2682 170 103 30 chrX 39403797 39404362 -127245934 + RMER20B LTR ERVK 22 627 0 8 885 438 317 0 96 chrX 39404362 39404514 -127245782 + B1F2 SINE Alu 12 148 -1 8 885 281 329 0 0 chrX 39404532 39404611 -127245685 - ID4_ SINE ID -3 80 2 8 885 356 330 38 0 chrX 39404625 39404731 -127245565 - PB1 SINE Alu -17 110 1 8 885 471 217 37 19 chrX 39404887 39404995 -127245301 - PB1D9 SINE Alu -1 119 10 8 885 527 231 327 30 chrX 39404998 39405301 -127244995 - L1MA4 LINE L1 -226 6074 5682 8 885 262 123 0 34 chrX 39405426 39405485 -127244811 + T-rich Low_complexity Low_complexity 3 59 0 8 885 750 177 7 14 chrX 39405486 39405629 -127244667 - B1_Mus1 SINE Alu 0 148 7 8 885 534 91 0 0 chrX 39405642 39405719 -127244577 + (TTTC)n Simple_repeat Simple_repeat 1 77 0 8 885 986 122 0 0 chrX 39405735 39405883 -127244413 - B2_Mm2 SINE B2 -46 149 2 8 885 567 43 0 0 chrX 39406021 39406091 -127244205 + (TTTC)n Simple_repeat Simple_repeat 4 73 0 8 885 5682 37 10 1 chrX 39406126 39406800 -127243496 - L1Md_F3 LINE L1 -3 6581 5902 8 885 1031 68 7 0 chrX 39406800 39406946 -127243350 - B2_Mm1a SINE B2 -46 147 1 8 885 598 265 15 0 chrX 39406949 39407085 -127243211 - B1F SINE Alu -6 143 6 8 885 542 235 18 105 chrX 39407085 39407199 -127243097 - L1MA4 LINE L1 -707 5584 5482 8 885 597 312 36 18 chrX 39407199 39407418 -127242878 - ID_B1 SINE B4 0 224 2 8 885 542 235 18 105 chrX 39407418 39407531 -127242765 - L1MA4 LINE L1 -810 5481 5377 8 885 535 192 9 9 chrX 39407541 39407646 -127242650 - B1_Mur2 SINE Alu -8 141 37 8 885 362 274 69 0 chrX 39407754 39407856 -127242440 - PB1D10 SINE Alu -8 109 1 8 885 220 341 93 12 chrX 39408222 39408308 -127241988 + PB1D10 SINE Alu 3 95 -22 8 885 1221 113 11 11 chrX 39408360 39408539 -127241757 + B2_Mm1t SINE B2 1 179 -14 8 885 289 109 0 127 chrX 39408586 39408649 -127241647 + B2_Mm2 SINE B2 47 101 -94 8 885 234 0 0 0 chrX 39408667 39408693 -127241603 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 8 885 252 0 0 0 chrX 39408767 39408795 -127241501 + (TGAG)n Simple_repeat Simple_repeat 3 30 0 8 885 304 277 31 41 chrX 39408796 39408894 -127241402 - RSINE1 SINE B4 -41 124 28 8 885 639 266 78 16 chrX 39408899 39409090 -127241206 - B3 SINE B2 -10 206 4 8 885 307 260 39 0 chrX 39409145 39409222 -127241074 - PB1D10 SINE Alu -6 111 32 8 885 1034 79 169 41 chrX 39409350 39409522 -127240774 - B2_Mm2 SINE B2 0 195 2 8 885 404 268 7 153 chrX 39409675 39409755 -127240541 - ID_B1 SINE B4 -7 217 158 8 885 710 174 56 42 chrX 39409755 39409899 -127240397 - B1_Mus1 SINE Alu -2 146 1 8 885 404 268 7 153 chrX 39409899 39409968 -127240328 - ID_B1 SINE B4 -67 157 90 8 885 230 368 0 0 chrX 39409900 39409976 -127240320 - PB1D10 SINE Alu -41 76 1 8 885 536 251 294 33 chrX 39410128 39410461 -127239835 + MER31B LTR ERV1 1 420 -65 8 885 755 275 23 63 chrX 39410811 39411110 -127239186 - MLT1B LTR MaLR -91 299 13 8 885 249 319 14 0 chrX 39411347 39411419 -127238877 - ID4_ SINE ID -9 74 2 8 885 927 86 63 14 chrX 39411440 39411582 -127238714 + B1_Mur4 SINE Alu 1 149 -1 8 885 963 88 65 7 chrX 39411585 39411723 -127238573 + B1_Mus2 SINE Alu 2 147 0 8 885 252 0 0 0 chrX 39411760 39411788 -127238508 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 8 885 1529 68 0 5 chrX 39411818 39412011 -127238285 + B2_Mm2 SINE B2 1 192 -3 8 885 294 301 0 0 chrX 39412011 39412094 -127238202 + RSINE1 SINE B4 81 163 -2 8 885 257 289 0 71 chrX 39412737 39412849 -127237447 + PB1D7 SINE Alu 1 104 -16 8 885 216 300 25 0 chrX 39412856 39412936 -127237360 + GA-rich Low_complexity Low_complexity 2 83 0 8 885 2181 80 90 0 chrX 39413452 39413751 -127236545 + ORR1A3 LTR MaLR 1 326 0 8 885 550 287 14 20 chrX 39413800 39413946 -127236350 - ID_B1 SINE B4 0 224 80 8 885 1927 130 14 74 chrX 39414150 39414500 -127235796 + ORR1A4 LTR MaLR 1 329 0 9 885 232 280 118 0 chrX 39414542 39414635 -127235661 - L2a LINE L2 -1 3425 3322 9 885 494 244 106 0 chrX 39414721 39414844 -127235452 - B3A SINE B2 -62 136 1 9 885 298 336 9 17 chrX 39414852 39414967 -127235329 - PB1D10 SINE Alu 0 117 4 9 885 812 228 5 21 chrX 39415044 39415232 -127235064 + B3 SINE B2 31 215 -1 9 885 740 254 24 24 chrX 39415437 39415606 -127234690 + B3A SINE B2 3 171 -27 9 885 21 36 0 0 chrX 39415637 39415665 -127234631 + AT_rich Low_complexity Low_complexity 1 28 0 9 885 681 197 28 35 chrX 39415827 39415969 -127234327 + B1_Mur1 SINE Alu 3 143 -6 9 885 596 87 11 0 chrX 39415969 39416061 -127234235 + (GAAA)n Simple_repeat Simple_repeat 1 93 0 9 885 287 267 21 78 chrX 39416206 39416348 -127233948 - L2a LINE L2 -254 3172 3039 9 885 649 257 86 18 chrX 39416510 39416730 -127233566 + B4 SINE B4 2 236 -56 9 885 1759 212 32 12 chrX 39416730 39417136 -127233160 - MTD LTR MaLR 0 419 6 9 885 828 156 50 0 chrX 39417308 39417449 -127232847 - B1_Mur3 SINE Alu -1 148 1 9 885 1133 68 0 13 chrX 39417459 39417608 -127232688 - B1_Mus2 SINE Alu 0 147 1 9 885 285 196 0 18 chrX 39417608 39417665 -127232631 - ID SINE ID -161 63 8 9 885 422 254 69 69 chrX 39417869 39418000 -127232296 - ID_B1 SINE B4 0 224 94 9 885 456 104 0 0 chrX 39418013 39418080 -127232216 + (TC)n Simple_repeat Simple_repeat 2 68 0 9 885 317 336 39 47 chrX 39418082 39418210 -127232086 + RSINE1 SINE B4 10 136 -29 9 885 402 235 0 0 chrX 39418408 39418489 -127231807 + L1MB3 LINE L1 6047 6127 -56 9 885 355 279 101 47 chrX 39418555 39418852 -127231444 + RMER10A LTR ERVL 122 434 -8 9 885 365 250 77 46 chrX 39418926 39419056 -127231240 + B1F SINE Alu 5 138 -11 9 885 302 263 195 0 chrX 39419056 39419085 -127231211 + B1F1 SINE Alu 3 143 -6 9 885 459 202 0 0 chrX 39419085 39419174 -127231122 + ID_B1 SINE B4 130 218 -6 9 885 377 319 28 21 chrX 39419192 39419326 -127230970 + B1F SINE Alu 1 138 -11 9 885 220 0 0 79 chrX 39419326 39419364 -127230932 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 9 885 435 271 53 139 chrX 39419842 39420086 -127230210 - ID_B1 SINE B4 0 224 2 9 885 452 183 76 34 chrX 39420153 39420272 -127230024 + RSINE1 SINE B4 2 125 -40 9 885 206 301 97 52 chrX 39420714 39420868 -127229428 + MIRb SINE MIR 89 249 -19 9 885 482 231 18 6 chrX 39421686 39421856 -127228440 + C-rich Low_complexity Low_complexity 2 173 0 9 885 24 0 0 0 chrX 39421911 39421935 -127228361 + GC_rich Low_complexity Low_complexity 1 24 0 9 885 25 0 0 0 chrX 39422059 39422084 -127228212 + AT_rich Low_complexity Low_complexity 1 25 0 9 885 381 289 131 7 chrX 39422679 39422832 -127227464 - MIR3 SINE MIR -2 206 35 9 885 457 216 43 35 chrX 39423722 39423837 -127226459 + PB1D10 SINE Alu 1 116 -1 9 885 735 247 29 0 chrX 39423878 39424052 -127226244 + B3 SINE B2 34 212 -4 9 885 216 309 119 0 chrX 39424058 39424142 -127226154 + PB1D10 SINE Alu 9 102 -15 9 885 224 323 69 50 chrX 39424557 39424658 -127225638 + PB1D10 SINE Alu 12 114 -6 9 885 670 163 106 0 chrX 39425212 39425335 -127224961 - B1_Mus1 SINE Alu -8 140 5 9 885 224 270 31 16 chrX 39425700 39425764 -127224532 - PB1D7 SINE Alu -55 65 1 9 885 24 32 0 0 chrX 39425780 39425811 -127224485 + AT_rich Low_complexity Low_complexity 1 31 0 9 885 498 209 0 42 chrX 39425815 39425935 -127224361 - B1_Mur4 SINE Alu -8 142 28 9 885 299 45 0 22 chrX 39425965 39426011 -127224285 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 9 885 1151 65 0 0 chrX 39426011 39426165 -127224131 - B2_Mm2 SINE B2 -40 155 2 9 885 710 214 7 14 chrX 39426384 39426531 -127223765 + B1F2 SINE Alu 1 146 -3 9 885 482 237 36 66 chrX 39426584 39426751 -127223545 + B3A SINE B2 15 176 -22 9 885 1220 41 7 0 chrX 39426914 39427061 -127223235 - B1_Mus1 SINE Alu 0 148 1 9 885 214 390 35 86 chrX 39427089 39427263 -127223033 - RSINE1 SINE B4 0 165 1 9 885 296 215 24 37 chrX 39427296 39427378 -127222918 - PB1D10 SINE Alu -19 98 18 9 885 695 132 0 58 chrX 39427567 39427688 -127222608 - PB1D9 SINE Alu -6 114 1 9 885 225 160 20 0 chrX 39427696 39427746 -127222550 + L1_Mur2 LINE L1 1869 1919 -3958 9 885 195 42 0 0 chrX 39427773 39427797 -127222499 + (T)n Simple_repeat Simple_repeat 1 24 0 9 885 1204 54 0 13 chrX 39427797 39427946 -127222350 - B1_Mus2 SINE Alu 0 147 1 9 885 180 111 0 0 chrX 39428098 39428125 -127222171 + (T)n Simple_repeat Simple_repeat 1 27 0 9 885 1218 54 0 0 chrX 39428127 39428274 -127222022 - B1_Mus1 SINE Alu 0 148 2 9 885 313 289 10 20 chrX 39428458 39428557 -127221739 + PB1D10 SINE Alu 11 108 -9 9 885 493 259 28 28 chrX 39429173 39429316 -127220980 + ID_B1 SINE B4 80 222 -2 9 885 1052 58 43 7 chrX 39429446 39429585 -127220711 + B1_Mus2 SINE Alu 4 147 0 9 885 305 318 0 45 chrX 39429640 39429752 -127220544 + PB1D10 SINE Alu 5 111 -6 9 885 265 192 68 0 chrX 39429752 39429825 -127220471 + Lx4B LINE L1 6981 7058 0 9 885 241 258 0 108 chrX 39429829 39429903 -127220393 + B4A SINE B4 81 146 -146 9 885 350 250 86 8 chrX 39429908 39430025 -127220271 + RSINE1 SINE B4 1 126 -39 9 885 273 200 30 30 chrX 39430030 39430097 -127220199 + ID_B1 SINE B4 158 224 0 9 885 193 265 58 0 chrX 39430415 39430487 -127219809 + MIR SINE MIR 75 149 -113 9 885 301 108 6 129 chrX 39430824 39430994 -127219302 + CT-rich Low_complexity Low_complexity 3 151 0 9 885 653 212 15 29 chrX 39430996 39431132 -127219164 - B1_Mur2 SINE Alu -6 143 10 9 885 368 219 0 0 chrX 39431256 39431329 -127218967 + B1F SINE Alu 70 142 -7 9 885 387 274 125 6 chrX 39431596 39431772 -127218524 - LTR83 LTR ERVL -579 201 5 9 885 244 188 125 0 chrX 39431910 39431974 -127218322 - MTD LTR MaLR -56 363 292 9 885 26 30 0 0 chrX 39431994 39432027 -127218269 + AT_rich Low_complexity Low_complexity 1 33 0 9 885 457 317 14 14 chrX 39432109 39432253 -127218043 - B1F SINE Alu 0 149 6 9 885 232 237 68 0 chrX 39432344 39432403 -127217893 - tRNA-Ala-GCY_ tRNA tRNA -9 66 4 9 885 212 243 90 51 chrX 39432505 39432583 -127217713 - ID4 SINE ID -1 82 2 9 885 1051 87 36 0 chrX 39432616 39432754 -127217542 - B1_Mus2 SINE Alu -2 145 3 9 885 255 220 16 78 chrX 39432833 39432897 -127217399 - RSINE1 SINE B4 -21 144 85 9 885 240 122 0 0 chrX 39432934 39432975 -127217321 + (TCCC)n Simple_repeat Simple_repeat 4 44 0 9 885 775 186 0 33 chrX 39433173 39433323 -127216973 - B1_Mur3 SINE Alu -2 147 3 9 885 2114 118 79 9 chrX 39433515 39433858 -127216438 + ORR1B2 LTR MaLR 1 367 0 9 885 1155 75 0 0 chrX 39434193 39434353 -127215943 + B2_Mm2 SINE B2 2 161 -34 9 885 198 0 0 0 chrX 39434353 39434375 -127215921 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 9 885 235 214 68 41 chrX 39434571 39434644 -127215652 - RSINE1 SINE B4 -38 127 53 9 885 974 88 44 0 chrX 39434702 39434838 -127215458 - B1_Mus1 SINE Alu -6 142 1 9 885 224 351 54 0 chrX 39434858 39434932 -127215364 + ID_B1 SINE B4 49 126 -98 9 885 237 295 218 0 chrX 39434891 39434969 -127215327 + B1F SINE Alu 5 99 -50 9 885 414 291 35 0 chrX 39435047 39435188 -127215108 + L1P5 LINE L1 5323 5468 -688 9 885 225 0 0 0 chrX 39435189 39435214 -127215082 + (T)n Simple_repeat Simple_repeat 1 25 0 9 885 974 47 148 0 chrX 39435214 39435342 -127214954 - B1_Mm SINE Alu 0 147 1 9 885 500 230 33 78 chrX 39435572 39435751 -127214545 + L1_Mur3 LINE L1 5399 5601 -690 9 885 303 280 28 0 chrX 39435760 39435867 -127214429 - PB1D10 SINE Alu -2 115 6 9 885 354 272 0 0 chrX 39435784 39435876 -127214420 - ID_B1 SINE B4 -55 169 78 9 885 427 266 55 0 chrX 39435891 39436019 -127214277 - B1F1 SINE Alu -6 143 9 9 885 630 195 18 0 chrX 39436329 39436442 -127213854 - B1_Mur2 SINE Alu -33 116 2 9 885 979 229 19 5 chrX 39436756 39436962 -127213334 - B3 SINE B2 0 216 8 9 885 301 259 0 141 chrX 39437229 39437328 -127212968 + PB1D10 SINE Alu 23 107 -10 9 885 332 320 10 10 chrX 39437369 39437467 -127212829 + PB1D10 SINE Alu 1 98 -19 9 885 309 267 39 55 chrX 39437378 39437505 -127212791 + ID_B1 SINE B4 91 215 -9 9 885 264 314 13 81 chrX 39437514 39437663 -127212633 + RSINE1 SINE B4 3 141 -24 9 885 673 168 41 27 chrX 39437944 39438091 -127212205 + B1_Mur4 SINE Alu 2 150 0 9 885 660 167 16 17 chrX 39438111 39438233 -127212063 + PB1D9 SINE Alu 1 120 0 9 885 593 281 7 20 chrX 39438238 39438387 -127211909 + RSINE1 SINE B4 2 148 -17 9 885 280 279 12 12 chrX 39438440 39438520 -127211776 + PB1D10 SINE Alu 12 91 -26 9 885 299 284 0 0 chrX 39438907 39438974 -127211322 + ID4 SINE ID 14 80 -3 9 885 274 320 68 30 chrX 39439010 39439142 -127211154 - L1MB8 LINE L1 -74 6104 5968 9 885 525 266 128 64 chrX 39439294 39439559 -127210737 - B4 SINE B4 -8 284 3 1 885 736 130 41 0 chrX 39440004 39440150 -127210146 - Lx2A1 LINE L1 0 7008 6857 1 885 206 196 0 42 chrX 39440174 39440222 -127210074 + CT-rich Low_complexity Low_complexity 3 48 0 1 885 568 221 26 40 chrX 39440224 39440375 -127209921 - B1F SINE Alu 0 149 1 1 885 372 22 0 0 chrX 39440427 39440472 -127209824 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 885 651 215 0 69 chrX 39440472 39440617 -127209679 - B1_Mur2 SINE Alu -13 136 2 1 885 297 75 0 0 chrX 39440928 39440968 -127209328 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 885 331 230 126 0 chrX 39440984 39441071 -127209225 - ID_B1 SINE B4 -12 212 115 1 885 306 297 121 0 chrX 39441825 39441916 -127208380 - PB1D10 SINE Alu 0 117 16 1 885 686 212 13 33 chrX 39442202 39442353 -127207943 - B1_Mur3 SINE Alu 0 149 2 1 885 510 340 7 13 chrX 39442472 39442621 -127207675 + RSINE1 SINE B4 3 150 -15 1 885 324 0 0 0 chrX 39442629 39442665 -127207631 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 885 288 299 253 13 chrX 39442792 39443029 -127207267 - L3 LINE CR1 -381 4108 3815 1 885 1082 53 15 0 chrX 39443114 39443247 -127207049 - B1_Mm SINE Alu -12 135 1 1 885 21 0 0 0 chrX 39443255 39443276 -127207020 + AT_rich Low_complexity Low_complexity 1 21 0 1 885 316 212 48 48 chrX 39443701 39443785 -127206511 - PB1D7 SINE Alu -1 119 36 1 885 1008 144 190 22 chrX 39443859 39444043 -127206253 - B3 SINE B2 0 216 2 1 885 335 289 39 10 chrX 39444050 39444256 -127206040 - L1MA5 LINE L1 -3 6297 6086 1 885 628 322 69 37 chrX 39444338 39444583 -127205713 + B4A SINE B4 28 280 -12 1 885 360 0 0 0 chrX 39444605 39444645 -127205651 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 885 385 249 117 0 chrX 39444669 39444775 -127205521 + B1F1 SINE Alu 2 119 -28 1 885 610 299 82 4 chrX 39444905 39445160 -127205136 - L1MA5 LINE L1 -406 5894 5620 1 885 849 246 32 5 chrX 39445196 39445384 -127204912 - ID_B1 SINE B4 -26 198 6 1 885 518 227 175 38 chrX 39445442 39445602 -127204694 - B3A SINE B2 -16 182 1 1 885 612 250 86 17 chrX 39445798 39446091 -127204205 - L1MA5 LINE L1 -721 5591 5276 1 885 342 307 46 23 chrX 39446180 39446310 -127203986 + MER94 DNA AcHobo 1 133 -1 1 885 242 242 20 71 chrX 39446699 39446797 -127203499 - RMER1C Other Other -13 1329 1237 1 885 276 288 0 0 chrX 39447187 39447260 -127203036 + ID4 SINE ID 1 73 -10 1 885 278 328 16 65 chrX 39448797 39448823 -127201473 + ID SINE ID 58 77 -147 1 885 422 299 8 17 chrX 39448823 39448942 -127201354 + PB1D7 SINE Alu 1 118 -2 1 885 204 40 0 0 chrX 39449174 39449199 -127201097 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1 885 1147 101 0 0 chrX 39449200 39449359 -127200937 - B2_Mm2 SINE B2 -35 160 2 1 885 234 0 0 0 chrX 39450045 39450071 -127200225 + (A)n Simple_repeat Simple_repeat 1 26 0 1 885 380 226 47 38 chrX 39450289 39450395 -127199901 - B1F SINE Alu -1 148 42 1 885 857 132 34 34 chrX 39450613 39450762 -127199534 + B1_Mur4 SINE Alu 2 150 0 1 885 579 236 47 8 chrX 39450826 39450954 -127199342 - B1F2 SINE Alu 0 149 17 1 885 471 294 44 0 chrX 39450955 39451091 -127199205 - ID_B1 SINE B4 -1 223 82 1 885 360 294 64 0 chrX 39451116 39451225 -127199071 - PB1D10 SINE Alu -1 116 1 1 885 371 248 71 47 chrX 39451361 39451488 -127198808 + B1F SINE Alu 15 144 -5 1 885 545 240 0 0 chrX 39451518 39451618 -127198678 + ID_B1 SINE B4 91 190 -34 1 885 319 313 0 0 chrX 39451635 39451718 -127198578 + ID4_ SINE ID 1 83 0 1 885 1536 180 114 35 chrX 39452126 39452495 -127197801 - Lx4B LINE L1 -4 7054 6657 1 885 324 0 0 0 chrX 39452495 39452531 -127197765 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 886 185 329 22 99 chrX 39452690 39452872 -127197424 + MIRc SINE MIR 11 178 -90 1 886 351 336 65 14 chrX 39453202 39453341 -127196955 + PB1D10 SINE Alu 1 146 -1 1 886 1025 196 40 15 chrX 39453372 39453574 -127196722 - B3 SINE B2 0 216 10 1 886 323 234 85 0 chrX 39453568 39453674 -127196622 - B1F1 SINE Alu -31 118 1 1 886 234 313 50 10 chrX 39453587 39453687 -127196609 - ID_B1 SINE B4 -52 172 69 1 886 643 208 77 0 chrX 39453838 39453968 -127196328 - B1_Mur3 SINE Alu 0 149 10 1 886 1280 84 28 0 chrX 39454036 39454215 -127196081 - B2_Mm1t SINE B2 -8 185 2 1 886 180 0 0 0 chrX 39454251 39454271 -127196025 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1 886 560 246 7 43 chrX 39454271 39454411 -127195885 - B1_Mur3 SINE Alu -11 138 4 1 886 963 118 7 14 chrX 39454437 39454583 -127195713 - B1_Mus1 SINE Alu -2 146 2 1 886 186 128 0 0 chrX 39454626 39454665 -127195631 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 1 886 744 141 85 15 chrX 39454868 39454998 -127195298 - B1_Mus2 SINE Alu 0 147 9 1 886 567 322 70 5 chrX 39454876 39455076 -127195220 - ID_B1 SINE B4 -6 218 6 1 886 739 155 54 8 chrX 39455580 39455710 -127194586 - B1_Mur3 SINE Alu -12 137 2 1 886 314 154 13 34 chrX 39455760 39455827 -127194469 - B2_Mm2 SINE B2 -82 116 46 1 886 1200 87 19 0 chrX 39455878 39456039 -127194257 - B2_Mm1t SINE B2 -28 165 2 1 886 227 321 64 50 chrX 39456545 39456572 -127193724 - MER74A LTR ERVL -89 469 428 1 886 290 192 19 0 chrX 39456572 39456624 -127193672 + B1_Mus2 SINE Alu 4 56 -91 1 886 227 321 64 50 chrX 39456624 39456686 -127193610 - MER74A LTR ERVL -89 427 327 1 886 554 327 6 47 chrX 39456776 39456946 -127193350 + RSINE1 SINE B4 1 163 -2 1 886 219 264 87 155 chrX 39456778 39456984 -127193312 + B2_Mm1t SINE B2 2 193 0 1 886 216 0 0 0 chrX 39457075 39457099 -127193197 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 886 275 335 44 62 chrX 39457679 39457905 -127192391 + L2c LINE L2 3143 3364 -23 1 886 302 278 107 88 chrX 39458742 39459014 -127191282 + L1ME4a LINE L1 5840 6116 -8 1 886 210 37 0 0 chrX 39459973 39460000 -127190296 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 886 654 144 143 8 chrX 39461209 39461328 -127188968 + B1_Mus1 SINE Alu 1 135 -13 1 886 228 294 131 110 chrX 39461354 39461545 -127188751 + B4 SINE B4 82 276 -16 1 886 469 322 88 6 chrX 39461716 39461897 -127188399 + B3A SINE B2 2 197 -1 1 886 421 289 48 79 chrX 39462159 39462324 -127187972 - MIR3 SINE MIR -2 206 47 1 886 485 245 144 56 chrX 39462857 39463017 -127187279 - ID_B1 SINE B4 -1 223 50 1 886 193 29 29 29 chrX 39463023 39463058 -127187238 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1 886 331 252 144 0 chrX 39463059 39463073 -127187223 - B4 SINE B4 -71 221 95 1 886 588 134 21 0 chrX 39463073 39463170 -127187126 - PB1D9 SINE Alu -12 108 10 1 886 530 165 41 10 chrX 39463234 39463332 -127186964 + PB1D9 SINE Alu 1 101 -19 1 886 271 329 0 131 chrX 39463403 39463487 -127186809 + ID4_ SINE ID 2 74 -9 1 886 282 269 114 9 chrX 39463804 39463909 -127186387 + PB1D10 SINE Alu 1 116 -1 1 886 364 314 72 8 chrX 39464205 39464330 -127185966 + RSINE1 SINE B4 4 136 -29 1 886 510 17 0 0 chrX 39465519 39465578 -127184718 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 886 290 209 162 15 chrX 39466424 39466492 -127183804 + ID4 SINE ID 1 78 -5 1 886 213 284 108 0 chrX 39466696 39466770 -127183526 - MIRm SINE MIR -128 148 67 1 886 2345 139 102 0 chrX 39466858 39467262 -127183034 - RMER4B LTR ERVK -140 445 1 1 886 777 242 0 0 chrX 39467262 39467423 -127182873 - RSINE1 SINE B4 -2 163 3 1 886 209 238 0 24 chrX 39467675 39467757 -127182539 + T-rich Low_complexity Low_complexity 4 83 0 1 886 200 200 0 0 chrX 39468269 39468309 -127181987 + (TGAA)n Simple_repeat Simple_repeat 4 43 0 1 886 872 232 23 132 chrX 39468370 39468503 -127181793 - MTEa LTR MaLR -67 312 204 1 886 2350 89 32 0 chrX 39468503 39468819 -127181477 + ORR1A2 LTR MaLR 1 326 -1 1 886 872 232 23 132 chrX 39468819 39468988 -127181308 - MTEa LTR MaLR -176 203 43 1 886 284 286 40 20 chrX 39469011 39469111 -127181185 - PB1D10 SINE Alu -11 106 5 1 886 293 303 43 60 chrX 39469350 39469466 -127180830 - PB1D10 SINE Alu -1 116 3 1 886 612 221 145 6 chrX 39469879 39470038 -127180258 + B3A SINE B2 1 181 -17 1 886 740 229 0 0 chrX 39470084 39470215 -127180081 - B1_Mur1 SINE Alu -8 141 11 1 886 669 183 0 16 chrX 39470215 39470337 -127179959 + PB1D9 SINE Alu 1 120 0 1 886 2002 253 135 78 chrX 39470634 39471009 -127179287 + RCHARR1 DNA MER1_type 4 457 -517 1 886 846 230 66 0 chrX 39471009 39471205 -127179091 + B3 SINE B2 5 213 -3 1 886 2002 253 135 78 chrX 39471205 39471289 -127179007 + RCHARR1 DNA MER1_type 458 523 -451 1 886 566 253 29 87 chrX 39471289 39471497 -127178799 + B3A SINE B2 3 198 0 1 886 2002 253 135 78 chrX 39471497 39471955 -127178341 + RCHARR1 DNA MER1_type 524 974 0 1 886 743 192 202 6 chrX 39472039 39472212 -127178084 + B3 SINE B2 1 207 -9 1 886 333 47 0 0 chrX 39472212 39472255 -127178041 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 886 680 223 0 0 chrX 39472979 39473100 -127177196 + B1F1 SINE Alu 10 130 -19 1 886 751 98 16 8 chrX 39473100 39473223 -127177073 + (TCTCCC)n Simple_repeat Simple_repeat 3 126 0 1 886 211 136 0 22 chrX 39473362 39473407 -127176889 + A-rich Low_complexity Low_complexity 2 45 0 1 886 220 276 17 17 chrX 39473470 39473529 -127176767 - B4 SINE B4 -210 82 24 1 886 371 317 83 0 chrX 39473526 39473646 -127176650 + RSINE1 SINE B4 5 134 -31 1 886 567 211 0 0 chrX 39473681 39473785 -127176511 + PB1D9 SINE Alu 1 104 -16 1 886 1099 176 217 25 chrX 39473785 39474099 -127176197 - ORR1D1 LTR MaLR 0 374 1 1 886 1166 68 0 0 chrX 39474127 39474273 -127176023 + B1_Mus1 SINE Alu 2 147 -1 1 886 6261 194 83 18 chrX 39474286 39475739 -127174557 - Lx9 LINE L1 -7 7637 6090 1 886 309 286 71 10 chrX 39475741 39475840 -127174456 - Lx9 LINE L1 -1658 5986 5882 1 886 288 0 0 0 chrX 39475876 39475908 -127174388 + (TCTG)n Simple_repeat Simple_repeat 4 35 0 1 886 815 166 14 0 chrX 39475910 39476049 -127174247 - B1_Mur4 SINE Alu -8 142 2 1 886 315 0 0 0 chrX 39476613 39476648 -127173648 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1 886 234 0 0 0 chrX 39476731 39476757 -127173539 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 886 594 168 9 9 chrX 39476757 39476865 -127173431 + RMER19A LTR ERVK 630 737 0 1 886 244 337 20 20 chrX 39476981 39476995 -127173301 - B3A SINE B2 -97 101 2 1 886 449 221 12 0 chrX 39476995 39477081 -127173215 - B4 SINE B4 -204 88 2 1 886 322 240 55 23 chrX 39477081 39477209 -127173087 + L1MD1 LINE L1 6110 6241 -1 1 886 301 323 65 0 chrX 39477251 39477344 -127172952 + RSINE1 SINE B4 65 163 -2 1 886 238 277 231 0 chrX 39477353 39477418 -127172878 - PB1D9 SINE Alu -39 81 2 1 886 868 299 48 0 chrX 39477446 39477633 -127172663 + ID_B1 SINE B4 1 196 -28 1 886 333 0 0 0 chrX 39477701 39477738 -127172558 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 886 393 281 22 106 chrX 39477812 39477991 -127172305 - ID_B1 SINE B4 -58 166 3 1 886 778 271 81 44 chrX 39478013 39478357 -127171939 - ORR1E LTR MaLR 0 359 3 1 886 482 200 138 9 chrX 39478940 39479056 -127171240 - B1_Mus1 SINE Alu -15 133 3 1 886 883 51 0 0 chrX 39479248 39479366 -127170930 + B1_Mus1 SINE Alu 31 148 0 1 886 336 143 0 0 chrX 39479366 39479422 -127170874 + (A)n Simple_repeat Simple_repeat 1 56 0 1 886 727 288 56 8 chrX 39479498 39479512 -127170784 - B4A SINE B4 -10 282 269 1 886 387 0 0 0 chrX 39479512 39479555 -127170741 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 886 727 288 56 8 chrX 39479555 39479806 -127170490 - B4A SINE B4 -24 268 5 1 886 235 204 37 139 chrX 39479822 39479930 -127170366 - B3 SINE B2 -7 209 113 1 886 407 323 8 24 chrX 39480001 39480128 -127170168 - B4A SINE B4 -59 233 109 1 886 378 0 0 0 chrX 39480192 39480234 -127170062 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 1 886 1109 52 0 0 chrX 39480235 39480369 -127169927 - B1_Mus1 SINE Alu -12 136 3 1 886 180 158 0 0 chrX 39480599 39480637 -127169659 + A-rich Low_complexity Low_complexity 1 38 0 1 886 274 184 0 0 chrX 39480651 39480700 -127169596 + MLT2D LTR ERVL 512 560 0 1 886 24 0 0 0 chrX 39480711 39480735 -127169561 + AT_rich Low_complexity Low_complexity 1 24 0 1 886 21 36 0 0 chrX 39480770 39480798 -127169498 + AT_rich Low_complexity Low_complexity 1 28 0 1 886 468 296 8 17 chrX 39480830 39480947 -127169349 - RSINE1 SINE B4 -49 116 1 1 886 351 0 0 0 chrX 39480967 39481006 -127169290 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 886 1285 191 23 84 chrX 39481013 39481357 -127168939 + ORR1D1 LTR MaLR 52 374 0 1 886 264 200 0 0 chrX 39481426 39481481 -127168815 - MMSAT4 Satellite Satellite -1 167 113 1 886 239 328 15 15 chrX 39481672 39481889 -127168407 - MMSAT4 Satellite Satellite -5 217 1 1 886 3070 122 21 4 chrX 39482165 39482644 -127167652 - RLTR1C LTR ERV1 -16 487 1 1 886 307 283 35 35 chrX 39482974 39483176 -127167120 - MMSAT4 Satellite Satellite -20 202 1 1 886 1661 49 0 0 chrX 39483228 39483433 -127166863 + L1Md_F3 LINE L1 6366 6570 -14 1 886 257 51 26 0 chrX 39484315 39484354 -127165942 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 1 886 1094 113 0 0 chrX 39484354 39484505 -127165791 - B2_Mm2 SINE B2 -43 152 2 1 886 228 243 118 26 chrX 39485108 39485184 -127165112 - ID4 SINE ID 0 83 1 1 886 267 254 12 112 chrX 39485798 39485878 -127164418 + MT2B LTR ERVL 169 240 -361 1 886 705 235 15 0 chrX 39485807 39485939 -127164357 + B1_Mur1 SINE Alu 15 148 -1 1 886 1227 34 0 20 chrX 39486033 39486183 -127164113 + B1_Mus2 SINE Alu 1 147 0 1 886 686 272 12 30 chrX 39486983 39487150 -127163146 - RSINE1 SINE B4 0 165 2 1 886 288 191 43 29 chrX 39487178 39487248 -127163048 + ID4_ SINE ID 5 75 -8 1 886 266 202 59 71 chrX 39487817 39487902 -127162394 - PB1D9 SINE Alu -21 99 16 1 886 385 206 55 64 chrX 39488324 39488433 -127161863 - PB1D10 SINE Alu 0 117 10 1 886 21 0 0 0 chrX 39488449 39488470 -127161826 + AT_rich Low_complexity Low_complexity 1 21 0 1 886 269 337 9 37 chrX 39488514 39488622 -127161674 - MER63A DNA AcHobo -105 105 1 1 886 394 280 101 18 chrX 39488831 39488940 -127161356 - PB1 SINE Alu -9 118 1 1 886 2216 182 92 10 chrX 39489058 39489546 -127160750 - RLTR11A LTR ERVK 0 528 1 1 886 294 143 0 0 chrX 39490334 39490383 -127159913 + (CATA)n Simple_repeat Simple_repeat 4 52 0 1 886 1117 66 0 0 chrX 39490722 39490859 -127159437 - B1_Mus1 SINE Alu -10 138 2 1 886 1119 260 50 15 chrX 39490994 39491392 -127158904 - L1M2 LINE L1 -513 5784 5373 1 886 1618 37 5 0 chrX 39491401 39491592 -127158704 - B2_Mm1t SINE B2 0 193 2 1 886 281 224 52 0 chrX 39491614 39491672 -127158624 + PB1D10 SINE Alu 52 112 -5 1 886 340 196 0 0 chrX 39491620 39491676 -127158620 + ID_B1 SINE B4 168 223 -1 1 886 185 0 40 0 chrX 39491889 39491914 -127158382 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 886 1117 65 0 0 chrX 39491914 39492053 -127158243 - B1_Mus2 SINE Alu -8 139 1 1 886 598 232 96 34 chrX 39492170 39492348 -127157948 - B3 SINE B2 -1 215 27 1 886 1317 62 73 0 chrX 39492366 39492545 -127157751 - B2_Mm1t SINE B2 0 193 2 1 886 1192 236 73 31 chrX 39492741 39493096 -127157200 - ORR1D2 LTR MaLR 0 370 1 1 886 254 209 23 159 chrX 39493287 39493463 -127156833 - L1M1 LINE L1 -613 5690 5539 1 886 524 240 95 45 chrX 39493946 39494125 -127156171 - MER3 DNA MER1_type -10 199 12 1 886 780 155 34 34 chrX 39494127 39494274 -127156022 - B1_Mur2 SINE Alu 0 149 3 1 886 792 264 18 0 chrX 39494418 39494581 -127155715 + B3 SINE B2 1 166 -50 1 886 21 36 0 0 chrX 39494656 39494684 -127155612 + AT_rich Low_complexity Low_complexity 1 28 0 1 886 306 0 0 0 chrX 39495379 39495413 -127154883 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 886 816 143 67 15 chrX 39495451 39495586 -127154710 - B1_Mur4 SINE Alu -6 144 3 1 886 746 285 93 22 chrX 39495621 39496021 -127154275 - L1MA4A LINE L1 -380 5923 5515 1 886 204 400 0 57 chrX 39496215 39496321 -127153975 + MER5A DNA MER1_type 7 106 -83 1 886 750 200 0 21 chrX 39496359 39496502 -127153794 - ID_B1 SINE B4 0 224 85 1 886 450 252 40 20 chrX 39496585 39496686 -127153610 + B1_Mur2 SINE Alu 1 103 -46 1 886 294 286 65 11 chrX 39496827 39496919 -127153377 + RSINE1 SINE B4 11 107 -58 1 886 204 135 0 0 chrX 39496928 39496965 -127153331 + (A)n Simple_repeat Simple_repeat 1 37 0 1 886 180 0 0 0 chrX 39496962 39496982 -127153314 + (CAAAG)n Simple_repeat Simple_repeat 2 21 0 1 886 566 205 83 45 chrX 39496985 39497118 -127153178 + B1_Mur3 SINE Alu 1 138 -11 1 886 305 262 192 10 chrX 39497534 39497638 -127152658 - PB1 SINE Alu -4 123 1 1 886 22 0 0 0 chrX 39497644 39497666 -127152630 + AT_rich Low_complexity Low_complexity 1 22 0 1 886 210 171 0 0 chrX 39497845 39497880 -127152416 + T-rich Low_complexity Low_complexity 1 35 0 1 886 1202 43 0 0 chrX 39497882 39498022 -127152274 - B1_Mus2 SINE Alu -7 140 1 1 886 397 200 78 31 chrX 39498030 39498159 -127152137 - L1MD LINE L1 -537 5822 5688 1 886 475 232 9 35 chrX 39498195 39498311 -127151985 + PB1D10 SINE Alu 2 114 -3 1 886 181 0 69 0 chrX 39498328 39498357 -127151939 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1 886 324 70 0 0 chrX 39498381 39498424 -127151872 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 1 886 735 303 0 0 chrX 39498454 39498606 -127151690 + RSINE1 SINE B4 3 154 -11 1 886 363 44 0 0 chrX 39498611 39498656 -127151640 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 886 1193 62 0 0 chrX 39498724 39498869 -127151427 + B1_Mus2 SINE Alu 2 146 -1 1 886 304 273 15 0 chrX 39498979 39499045 -127151251 - ID4 SINE ID -2 81 15 1 886 581 183 5 33 chrX 39499004 39499148 -127151148 - B1_Mus1 SINE Alu -16 133 1 1 886 747 204 0 0 chrX 39499722 39499854 -127150442 + B1_Mus1 SINE Alu 10 141 -7 1 886 1167 50 0 0 chrX 39500140 39500281 -127150015 - B1_Mus2 SINE Alu -5 142 2 1 886 218 217 0 0 chrX 39501746 39501792 -127148504 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 886 657 137 0 0 chrX 39502528 39502645 -127147651 + (A)n Simple_repeat Simple_repeat 1 117 0 3 886 25 75 0 0 chrX 39502997 39503050 -127147246 + GC_rich Low_complexity Low_complexity 1 53 0 4 886 203 136 0 43 chrX 39503553 39503599 -127146697 + (TGG)n Simple_repeat Simple_repeat 2 45 0 5 886 514 130 8 54 chrX 39503744 39503874 -127146422 + CT-rich Low_complexity Low_complexity 4 127 0 6 886 453 273 49 16 chrX 39508315 39508438 -127141858 + B1F SINE Alu 7 133 -16 7 886 359 242 72 21 chrX 39508517 39508614 -127141682 - PB1D7 SINE Alu -2 118 17 8 886 626 128 74 0 chrX 39508599 39508722 -127141574 + B1_Mus1 SINE Alu 14 148 0 9 886 261 171 0 9 chrX 39508862 39508970 -127141326 + CT-rich Low_complexity Low_complexity 1 107 0 1 886 827 140 44 7 chrX 39508975 39509112 -127141184 - B1_Mur4 SINE Alu -8 142 1 1 886 203 226 90 15 chrX 39509121 39509186 -127141110 - MIR SINE MIR -116 160 86 1 886 381 329 14 14 chrX 39509380 39509525 -127140771 + RSINE1 SINE B4 2 146 -19 1 886 383 116 72 0 chrX 39509587 39509656 -127140640 - B1_Mur1 SINE Alu 0 149 76 1 886 521 277 136 0 chrX 39509927 39510104 -127140192 + B3 SINE B2 3 203 -13 1 886 841 116 28 42 chrX 39510636 39510780 -127139516 - B1_Mus1 SINE Alu -6 142 1 1 886 351 145 0 0 chrX 39510810 39510879 -127139417 + (T)n Simple_repeat Simple_repeat 1 69 0 1 886 1222 41 7 0 chrX 39510879 39511026 -127139270 - B1_Mus1 SINE Alu 0 148 1 1 886 270 310 20 10 chrX 39511543 39511644 -127138652 - MIR SINE MIR -1 261 160 1 886 644 195 102 0 chrX 39511682 39511810 -127138486 - B1_Mus2 SINE Alu -5 142 2 2 886 492 269 15 44 chrX 39511857 39511993 -127138303 - B1F1 SINE Alu -16 133 2 2 886 298 270 11 22 chrX 39511993 39512083 -127138213 - MER94 DNA AcHobo -25 109 21 2 886 231 88 0 0 chrX 39512310 39512344 -127137952 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2 886 1143 176 155 23 chrX 39512857 39513166 -127137130 - RMER4B LTR ERVK -9 576 227 2 886 1001 80 7 0 chrX 39513170 39513307 -127136989 - B1_Mus1 SINE Alu 0 148 11 2 886 1492 184 19 26 chrX 39513391 39513703 -127136593 - Lx5 LINE L1 -55 6995 6686 2 886 1148 44 0 0 chrX 39513833 39513969 -127136327 + B1_Mus2 SINE Alu 1 136 -11 2 886 315 0 0 0 chrX 39513969 39514004 -127136292 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 886 243 241 0 151 chrX 39514110 39514203 -127136093 - ID4_ SINE ID -3 80 2 2 886 850 125 44 0 chrX 39514412 39514548 -127135748 - B1_Mus2 SINE Alu -1 146 5 3 886 1187 41 7 0 chrX 39514574 39514719 -127135577 - B1_Mus2 SINE Alu 0 147 2 3 886 1269 27 0 0 chrX 39514771 39514917 -127135379 + B1_Mus2 SINE Alu 2 147 0 3 886 577 163 58 96 chrX 39514973 39515129 -127135167 + B1_Mur4 SINE Alu 1 150 0 3 886 216 273 0 22 chrX 39515176 39515221 -127135075 - ID4_ SINE ID 0 83 40 3 886 237 288 48 36 chrX 39515481 39515564 -127134732 - PB1D10 SINE Alu 0 117 34 3 886 263 329 10 168 chrX 39515502 39515653 -127134643 - ID_B1 SINE B4 -48 176 2 3 886 272 268 0 18 chrX 39515653 39515710 -127134586 - ID4_ SINE ID -26 57 2 3 886 203 200 0 0 chrX 39515936 39515971 -127134325 + A-rich Low_complexity Low_complexity 1 35 0 3 886 1214 115 11 5 chrX 39515978 39516162 -127134134 + B2_Mm1t SINE B2 1 185 -8 3 886 395 249 31 0 chrX 39516175 39516269 -127134027 + PB1 SINE Alu 36 221 -90 3 886 344 308 9 19 chrX 39516277 39516383 -127133913 - PB1D9 SINE Alu -2 118 14 4 886 4475 73 10 2 chrX 39516445 39517048 -127133248 - L1_Mus3 LINE L1 -9 6629 6022 4 886 311 314 0 81 chrX 39517089 39517188 -127133108 - ID4_ SINE ID -55 97 6 4 886 560 194 90 30 chrX 39517240 39517373 -127132923 + B3 SINE B2 57 197 -19 4 886 805 122 0 16 chrX 39517371 39517496 -127132800 + B1_Mur3 SINE Alu 26 148 -1 4 886 1196 207 0 0 chrX 39517513 39517716 -127132580 - B3 SINE B2 -13 203 1 4 886 479 200 82 0 chrX 39517719 39517829 -127132467 - ID_B1 SINE B4 -2 222 104 4 886 763 244 24 6 chrX 39518064 39518229 -127132067 - B3 SINE B2 -48 168 1 4 886 1347 89 21 5 chrX 39518353 39518544 -127131752 - B2_Mm2 SINE B2 0 195 2 4 886 388 355 40 0 chrX 39519580 39519704 -127130592 - MIRb SINE MIR -137 131 3 4 886 228 221 59 0 chrX 39520372 39520440 -127129856 - ID SINE ID -152 72 1 4 886 21 0 0 0 chrX 39520465 39520486 -127129810 + AT_rich Low_complexity Low_complexity 1 21 0 5 886 366 330 67 11 chrX 39520598 39520776 -127129520 - MIR SINE MIR -73 189 2 5 886 1187 48 7 0 chrX 39521120 39521265 -127129031 + B1_Mus2 SINE Alu 2 147 0 5 886 584 205 102 0 chrX 39521327 39521454 -127128842 + B3 SINE B2 1 140 -76 5 886 327 336 53 8 chrX 39521552 39521684 -127128612 + L2a LINE L2 3286 3423 -3 5 886 246 208 52 65 chrX 39522201 39522278 -127128018 - PB1D9 SINE Alu 0 120 45 5 886 618 265 0 29 chrX 39523213 39523353 -127126943 + B3A SINE B2 2 137 -61 5 886 258 236 0 18 chrX 39523490 39523546 -127126750 + ID4 SINE ID 23 77 -6 5 886 260 219 0 12 chrX 39523560 39523643 -127126653 + (TG)n Simple_repeat Simple_repeat 1 82 0 5 886 333 252 23 0 chrX 39523691 39523815 -127126481 - L1MB3 LINE L1 -43 6140 6013 5 886 590 207 183 33 chrX 39523923 39524103 -127126193 + B3 SINE B2 2 208 -8 6 886 220 352 70 21 chrX 39524438 39524580 -127125716 - L2a LINE L2 -9 3417 3269 6 886 485 242 31 39 chrX 39524785 39524914 -127125382 - B1F SINE Alu -21 128 1 6 886 291 177 0 16 chrX 39525131 39525194 -127125102 - B1_Mur4 SINE Alu 0 150 89 6 886 223 308 47 86 chrX 39525295 39525423 -127124873 - B3A SINE B2 -2 196 74 6 886 460 318 68 58 chrX 39525445 39525652 -127124644 - B3A SINE B2 -7 209 1 6 886 1056 103 14 0 chrX 39525683 39525829 -127124467 + B1_Mus1 SINE Alu 1 148 0 6 886 282 111 0 0 chrX 39525829 39525852 -127124444 + (A)n Simple_repeat Simple_repeat 1 23 0 6 886 324 0 0 0 chrX 39525852 39525888 -127124408 + (GA)n Simple_repeat Simple_repeat 2 37 0 6 886 282 111 0 0 chrX 39525888 39525909 -127124387 + (A)n Simple_repeat Simple_repeat 1 21 0 6 886 7018 113 79 6 chrX 39526005 39527094 -127123202 - Lx4A LINE L1 -14 7044 5876 7 886 1125 90 12 12 chrX 39527094 39527239 -127123057 + B2_Mm1t SINE B2 2 146 -47 7 886 324 0 0 0 chrX 39527239 39527275 -127123021 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 886 1125 90 12 12 chrX 39527275 39527298 -127122998 + B2_Mm1t SINE B2 147 168 -25 7 886 3579 122 102 13 chrX 39527303 39527390 -127122906 - L1_Mur2 LINE L1 0 5877 5791 7 886 592 106 336 7 chrX 39527390 39527533 -127122763 - B2_Mm2 SINE B2 -4 191 2 7 886 3579 125 102 14 chrX 39527533 39528133 -127122163 - L1_Mur2 LINE L1 -87 5790 5145 7 886 575 174 254 5 chrX 39528438 39528623 -127121673 + Lx5 LINE L1 6820 7050 0 7 886 553 179 67 25 chrX 39528814 39528934 -127121362 - B1F SINE Alu -7 142 18 7 886 373 264 89 83 chrX 39528934 39528975 -127121321 - B4 SINE B4 -65 203 58 7 886 230 333 0 0 chrX 39529203 39529272 -127121024 + L2a LINE L2 3342 3410 -16 7 886 262 284 129 59 chrX 39529499 39529600 -127120696 + PB1D10 SINE Alu 3 110 -7 7 886 247 279 14 29 chrX 39529605 39529675 -127120621 + ID4 SINE ID 2 70 -13 8 886 368 220 20 99 chrX 39529679 39529759 -127120537 + ID_B1 SINE B4 132 211 -13 8 886 261 0 0 0 chrX 39529759 39529788 -127120508 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 8 886 368 220 20 99 chrX 39529788 39529808 -127120488 + ID_B1 SINE B4 212 224 0 8 886 1170 115 22 0 chrX 39529887 39530069 -127120227 - BGLII_B LTR ERVK -255 186 1 8 886 396 304 44 69 chrX 39530069 39530206 -127120090 - MTEb LTR MaLR -238 141 9 8 886 258 253 54 65 chrX 39530318 39530411 -127119885 - MIRb SINE MIR -10 258 167 8 886 225 94 0 0 chrX 39530844 39530876 -127119420 + (TG)n Simple_repeat Simple_repeat 1 32 0 8 886 274 280 35 70 chrX 39531625 39531740 -127118556 - PB1D9 SINE Alu -5 115 5 8 886 1114 83 0 0 chrX 39532459 39532604 -127117692 + B1_Mus1 SINE Alu 2 146 -2 8 886 366 42 0 0 chrX 39532632 39532680 -127117616 + (CAAAC)n Simple_repeat Simple_repeat 2 49 0 8 886 248 395 86 0 chrX 39533284 39533297 -127116999 - B4 SINE B4 -58 234 166 9 886 469 298 24 0 chrX 39533297 39533421 -127116875 - B1_Mm SINE Alu -20 127 1 9 886 248 395 86 0 chrX 39533421 39533436 -127116860 - B4 SINE B4 -58 165 70 9 886 402 170 128 28 chrX 39533818 39533927 -127116369 + PB1D9 SINE Alu 1 120 0 9 886 211 271 0 79 chrX 39534065 39534141 -127116155 - RSINE1 SINE B4 -61 104 35 9 886 422 355 92 60 chrX 39534561 39534602 -127115694 - B4 SINE B4 0 292 253 9 886 495 248 82 8 chrX 39534602 39534736 -127115560 - B1_Mur4 SINE Alu -6 144 1 9 886 422 355 92 60 chrX 39534736 39534976 -127115320 - B4 SINE B4 -40 252 2 9 886 380 276 146 0 chrX 39535134 39535257 -127115039 - B1_Mur1 SINE Alu -2 147 7 9 886 422 210 210 0 chrX 39535623 39535747 -127114549 - RCHARR1 DNA MER1_type -3 971 822 9 886 431 257 9 37 chrX 39535751 39535859 -127114437 + B3A SINE B2 4 108 -90 9 886 821 176 119 87 chrX 39535859 39536077 -127114219 - URR1A DNA MER1_type -1 225 1 9 886 294 232 61 0 chrX 39536087 39536169 -127114127 + B3 SINE B2 130 216 0 9 886 1927 208 267 26 chrX 39536141 39536846 -127113450 - RCHARR1 DNA MER1_type -98 876 2 9 886 1532 148 69 52 chrX 39537096 39537445 -127112851 - RMER6A LTR ERVK -63 693 339 1 886 427 244 31 78 chrX 39537413 39537542 -127112754 - B1_Mur4 SINE Alu -23 127 5 1 886 507 178 0 130 chrX 39537514 39537637 -127112659 - MT2B LTR ERVL -314 287 181 1 886 727 163 47 0 chrX 39537598 39537727 -127112569 - RMER6A LTR ERVK -555 135 1 1 886 248 263 165 21 chrX 39538112 39538209 -127112087 - PB1D10 SINE Alu -1 116 6 1 886 635 213 73 16 chrX 39538320 39538444 -127111852 + B1_Mur1 SINE Alu 6 136 -13 1 886 342 0 0 0 chrX 39538444 39538482 -127111814 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 1 886 541 251 124 179 chrX 39538588 39538967 -127111329 - MLT1C LTR MaLR -83 384 27 1 886 192 40 0 0 chrX 39538973 39538998 -127111298 + (CAA)n Simple_repeat Simple_repeat 3 27 0 1 886 583 260 74 0 chrX 39539158 39539427 -127110869 - L1MD LINE L1 -541 5701 5413 1 886 747 83 7 64 chrX 39539438 39539579 -127110717 + L1Md_F2 LINE L1 6440 6572 -10 1 886 278 271 14 0 chrX 39539580 39539650 -127110646 - ID4_ SINE ID -11 72 2 1 886 306 0 0 0 chrX 39540280 39540314 -127109982 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 886 233 328 0 0 chrX 39540383 39540441 -127109855 - RSINE1 SINE B4 -106 59 2 1 886 628 275 130 65 chrX 39540777 39541115 -127109181 - MTEa LTR MaLR -19 360 1 1 886 1021 269 19 16 chrX 39542245 39542559 -127107737 - L1M3 LINE L1 -351 5820 5506 1 886 349 341 14 65 chrX 39542775 39542913 -127107383 - RSINE1 SINE B4 -22 143 13 1 886 732 174 0 0 chrX 39542947 39543062 -127107234 - B3A SINE B2 -57 141 27 1 886 1275 80 11 6 chrX 39543057 39543233 -127107063 - B2_Mm2 SINE B2 -7 188 12 1 886 510 250 48 8 chrX 39543310 39543435 -127106861 - B1_Mur1 SINE Alu -7 142 13 1 886 912 301 66 25 chrX 39543437 39544147 -127106149 - L1M3 LINE L1 -1397 4743 4005 1 886 277 252 66 156 chrX 39544311 39544433 -127105863 + PB1D9 SINE Alu 1 111 -9 1 886 26 0 0 0 chrX 39544508 39544534 -127105762 + AT_rich Low_complexity Low_complexity 1 26 0 1 886 6392 186 71 40 chrX 39544577 39545006 -127105290 - Lx7 LINE L1 -6 7690 7255 1 886 1145 124 16 41 chrX 39545006 39545200 -127105096 + B2_Mm2 SINE B2 2 190 -5 1 886 6392 186 71 40 chrX 39545200 39546292 -127104004 - Lx7 LINE L1 -442 7254 6122 1 886 259 229 0 0 chrX 39546301 39546349 -127103947 - ID4_ SINE ID -2 81 34 1 886 243 0 0 0 chrX 39547013 39547040 -127103256 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 886 1096 58 0 0 chrX 39547040 39547178 -127103118 - B1_Mm SINE Alu -9 138 1 1 886 588 254 121 19 chrX 39548326 39548513 -127101783 - B3 SINE B2 -8 187 1 1 886 257 286 38 25 chrX 39549133 39549212 -127101084 + ID4_ SINE ID 2 81 -2 1 886 248 297 12 86 chrX 39549380 39549461 -127100835 - PB1D10 SINE Alu -40 77 3 1 886 1384 84 5 0 chrX 39549541 39549732 -127100564 - B2_Mm1t SINE B2 0 193 2 1 886 24 0 0 0 chrX 39550149 39550173 -127100123 + AT_rich Low_complexity Low_complexity 1 24 0 1 886 399 89 0 0 chrX 39550325 39550381 -127099915 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 886 911 304 61 57 chrX 39550812 39551272 -127099024 - MER44B DNA MER2_type -49 501 40 1 886 187 141 78 0 chrX 39551591 39551655 -127098641 + (TA)n Simple_repeat Simple_repeat 1 69 0 1 886 343 287 8 80 chrX 39551834 39551959 -127098337 - PB1D10 SINE Alu -1 116 1 1 886 485 239 92 0 chrX 39552214 39552344 -127097952 + B1_Mur2 SINE Alu 5 146 -3 1 886 535 271 68 0 chrX 39552910 39553043 -127097253 - ID_B1 SINE B4 0 224 83 1 886 507 134 0 0 chrX 39553047 39553129 -127097167 + (CATA)n Simple_repeat Simple_repeat 4 85 0 1 886 470 236 26 43 chrX 39553258 39553373 -127096923 - B1_Mus2 SINE Alu -34 113 1 1 886 537 276 44 19 chrX 39553523 39553682 -127096614 - RSINE1 SINE B4 0 165 3 1 886 581 243 63 63 chrX 39553740 39553898 -127096398 + ID_B1 SINE B4 67 224 0 1 886 439 310 89 27 chrX 39553929 39554075 -127096221 + RSINE1 SINE B4 8 162 -3 1 886 238 229 49 0 chrX 39554263 39554324 -127095972 - ID_B1 SINE B4 -1 223 160 1 886 23 33 0 0 chrX 39555366 39555396 -127094900 + AT_rich Low_complexity Low_complexity 1 30 0 1 886 431 233 353 0 chrX 39555420 39555553 -127094743 - B3A SINE B2 -18 180 1 1 886 947 220 81 150 chrX 39555607 39556013 -127094283 - ORR1C1 LTR MaLR 0 378 1 1 886 599 244 45 8 chrX 39556262 39556394 -127093902 + B3 SINE B2 1 137 -79 1 886 3219 36 18 0 chrX 39556414 39556803 -127093493 - MTA_Mm LTR MaLR 0 396 1 1 886 234 0 0 0 chrX 39556945 39556971 -127093325 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 886 421 221 0 63 chrX 39556971 39557080 -127093216 - PB1D9 SINE Alu -10 110 12 1 886 629 281 111 0 chrX 39557460 39557659 -127092637 - ID_B1 SINE B4 -2 222 2 1 886 1187 62 0 0 chrX 39557771 39557917 -127092379 - B1_Mus1 SINE Alu 0 148 3 1 886 521 302 9 0 chrX 39557949 39558065 -127092231 + PB1D10 SINE Alu 1 117 0 1 886 992 80 7 7 chrX 39558312 39558450 -127091846 + B1_Mus2 SINE Alu 1 138 -9 1 886 366 208 26 0 chrX 39558496 39558573 -127091723 - B1_Mur3 SINE Alu -33 116 38 1 886 246 231 0 97 chrX 39558512 39558584 -127091712 - RLTR25A LTR ERVK -531 572 508 1 886 260 154 0 0 chrX 39558647 39558686 -127091610 - B1_Mus1 SINE Alu -108 40 2 1 886 426 20 0 0 chrX 39559427 39559478 -127090818 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 886 1170 112 0 0 chrX 39559901 39560079 -127090217 + (TC)n Simple_repeat Simple_repeat 1 178 0 1 886 213 94 0 0 chrX 39560236 39560268 -127090028 + (CATA)n Simple_repeat Simple_repeat 2 33 0 1 886 1093 52 0 0 chrX 39560613 39560749 -127089547 + B1_Mus2 SINE Alu 2 137 -10 1 886 207 0 0 0 chrX 39560749 39560772 -127089524 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1 886 221 171 24 0 chrX 39560807 39560848 -127089448 + CT-rich Low_complexity Low_complexity 1 42 0 1 886 223 310 124 41 chrX 39560848 39560969 -127089327 - ID_B1 SINE B4 -7 217 87 1 886 319 291 83 69 chrX 39561319 39561463 -127088833 + B1F SINE Alu 2 147 -2 1 886 224 303 39 13 chrX 39561469 39561546 -127088750 + ID4_ SINE ID 2 80 -3 1 886 31 68 0 0 chrX 39561704 39561763 -127088533 + AT_rich Low_complexity Low_complexity 1 59 0 1 886 240 111 0 0 chrX 39561843 39561888 -127088408 + (T)n Simple_repeat Simple_repeat 1 45 0 1 886 689 272 82 48 chrX 39561888 39562166 -127088130 + MTE2a LTR MaLR 82 419 0 1 886 748 291 0 33 chrX 39562357 39562570 -127087726 + B3 SINE B2 1 206 -10 1 886 772 266 12 116 chrX 39562607 39562858 -127087438 + Lx8 LINE L1 7097 7321 -152 1 886 207 170 0 0 chrX 39562872 39562919 -127087377 + GA-rich Low_complexity Low_complexity 2 48 0 1 886 481 89 38 0 chrX 39563030 39563109 -127087187 - Lx LINE L1 -271 6383 6302 1 886 940 171 10 20 chrX 39563110 39563307 -127086989 + Lx2 LINE L1 6789 6983 -14 1 886 189 0 0 0 chrX 39563394 39563415 -127086881 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 886 471 234 54 0 chrX 39563465 39563576 -127086720 - RSINE1 SINE B4 -43 122 6 1 886 294 241 51 0 chrX 39563735 39563814 -127086482 + CT-rich Low_complexity Low_complexity 6 88 0 1 886 437 367 50 0 chrX 39563814 39563934 -127086362 - ID_B1 SINE B4 -15 209 84 1 886 182 369 136 0 chrX 39563940 39564043 -127086253 - MIR SINE MIR -125 137 21 1 886 378 0 0 0 chrX 39564544 39564586 -127085710 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 886 329 323 6 64 chrX 39564604 39564776 -127085520 - RSINE1 SINE B4 0 165 4 1 886 381 344 31 31 chrX 39564824 39564983 -127085313 - RSINE1 SINE B4 0 165 7 1 886 802 279 57 29 chrX 39565332 39565382 -127084914 + B3 SINE B2 1 48 -168 1 886 1673 135 184 3 chrX 39565382 39565702 -127084594 - ORR1C1 LTR MaLR 0 378 1 1 886 802 279 57 29 chrX 39565702 39565861 -127084435 + B3 SINE B2 49 216 0 1 886 198 118 0 0 chrX 39566603 39566637 -127083659 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 886 272 272 12 47 chrX 39566671 39566756 -127083540 - ID SINE ID -138 86 5 1 886 919 294 53 53 chrX 39566769 39567092 -127083204 - MLT1A0 LTR MaLR -2 363 41 1 886 408 364 84 11 chrX 39567626 39567804 -127082492 - B3A SINE B2 -7 191 1 1 886 319 308 67 9 chrX 39567952 39568057 -127082239 - PB1D10 SINE Alu 0 117 7 1 886 386 287 95 69 chrX 39568109 39568225 -127082071 + B1F1 SINE Alu 9 127 -22 1 886 283 279 65 65 chrX 39568541 39568660 -127081636 - MLT1G3 LTR MaLR -220 371 253 1 886 1384 264 140 18 chrX 39569269 39569989 -127080307 - L1MB7 LINE L1 -55 6129 5325 1 886 642 220 201 0 chrX 39570009 39570168 -127080128 - B3 SINE B2 -21 195 5 1 886 228 351 128 0 chrX 39571579 39571673 -127078623 - PB1 SINE Alu -7 120 15 1 886 459 108 0 0 chrX 39572533 39572607 -127077689 - L1_Mus2 LINE L1 0 6566 6493 1 886 739 288 121 43 chrX 39572929 39573357 -127076939 - Lx8 LINE L1 -356 7117 6654 1 886 282 308 77 0 chrX 39573355 39573446 -127076850 - Lx8 LINE L1 -931 6542 6445 1 886 400 244 137 29 chrX 39573773 39573912 -127076384 + MER2 DNA MER2_type 115 268 -77 1 886 212 312 75 11 chrX 39574335 39574429 -127075867 + MIRb SINE MIR 85 184 -84 1 886 210 225 0 0 chrX 39575494 39575534 -127074762 + (CATG)n Simple_repeat Simple_repeat 4 43 0 1 886 253 242 61 0 chrX 39575535 39575601 -127074695 - ID4 SINE ID -11 72 3 1 886 602 65 0 11 chrX 39575711 39575805 -127074491 + L1Md_F2 LINE L1 6490 6582 0 1 886 298 271 14 22 chrX 39575822 39575912 -127074384 - ID4 SINE ID -47 105 15 2 886 452 214 163 0 chrX 39576734 39576832 -127073464 - B1_Mur1 SINE Alu -4 145 32 2 886 403 288 9 0 chrX 39577262 39577373 -127072923 + PB1D7 SINE Alu 1 112 -8 2 886 795 226 7 0 chrX 39577503 39577658 -127072638 - B3 SINE B2 -34 182 27 2 886 192 167 0 0 chrX 39577658 39577706 -127072590 + T-rich Low_complexity Low_complexity 1 48 0 2 886 270 128 0 0 chrX 39577727 39577766 -127072530 - B2_Mm2 SINE B2 -155 40 2 2 886 233 329 49 37 chrX 39578352 39578434 -127071862 - ID4_ SINE ID 0 83 1 2 886 195 42 0 0 chrX 39578709 39578733 -127071563 + (T)n Simple_repeat Simple_repeat 1 24 0 2 886 700 196 13 39 chrX 39578734 39578888 -127071408 - B1_Mur4 SINE Alu 0 150 1 2 886 1153 75 0 0 chrX 39578927 39579074 -127071222 - B1_Mus2 SINE Alu 0 147 1 2 886 189 0 0 0 chrX 39579361 39579382 -127070914 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2 886 728 217 14 27 chrX 39579471 39579618 -127070678 + B1_Mus2 SINE Alu 3 147 0 2 886 245 294 51 79 chrX 39579618 39579638 -127070658 + B4A SINE B4 127 248 -44 2 886 21 0 0 0 chrX 39580727 39580748 -127069548 + AT_rich Low_complexity Low_complexity 1 21 0 2 886 861 208 81 19 chrX 39580870 39581081 -127069215 + URR1B DNA MER1_type 2 225 0 2 886 219 36 0 0 chrX 39581122 39581150 -127069146 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 886 573 281 14 0 chrX 39581586 39581732 -127068564 + B1_Mur2 SINE Alu 1 148 -1 2 886 270 0 0 0 chrX 39582069 39582099 -127068197 + (TCTA)n Simple_repeat Simple_repeat 3 32 0 2 886 660 301 122 51 chrX 39583153 39583303 -127066993 - L1MB3 LINE L1 -7 6176 6039 2 886 1419 65 16 0 chrX 39583303 39583489 -127066807 - B2_Mm2 SINE B2 -5 190 2 2 110 660 301 122 51 chrX 39583489 39583887 -127066409 - L1MB3 LINE L1 -145 6038 5589 2 887 264 59 0 0 chrX 39584148 39584182 -127066114 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 2 887 603 50 50 0 chrX 39584185 39584265 -127066031 - B1_Mm SINE Alu -12 135 52 2 887 1296 77 44 0 chrX 39584398 39584581 -127065715 + B2_Mm2 SINE B2 2 192 -3 2 887 225 0 0 0 chrX 39584590 39584615 -127065681 + (TC)n Simple_repeat Simple_repeat 2 26 0 2 887 333 0 0 0 chrX 39584719 39584756 -127065540 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 887 558 0 0 0 chrX 39584756 39584817 -127065479 + (GA)n Simple_repeat Simple_repeat 1 62 0 2 887 228 308 0 43 chrX 39584855 39584933 -127065363 + B1F1 SINE Alu 3 70 -79 2 887 533 278 67 14 chrX 39585178 39585386 -127064910 - Lx4B LINE L1 -5 7053 6835 2 887 687 276 19 19 chrX 39585329 39585543 -127064753 + Lx2B LINE L1 6528 6741 -235 2 887 1128 292 52 59 chrX 39585660 39586082 -127064214 + MTD LTR MaLR 1 419 0 2 887 373 332 61 61 chrX 39586331 39586543 -127063753 + B4 SINE B4 2 213 -79 2 887 371 263 20 29 chrX 39586732 39586834 -127063462 - ID_B1 SINE B4 -22 202 102 2 887 1474 141 74 4 chrX 39588175 39588432 -127061864 - Lx4A LINE L1 -1 7057 6783 2 887 391 247 20 40 chrX 39588498 39588599 -127061697 - B1F SINE Alu -9 140 42 2 887 499 181 156 49 chrX 39588623 39588745 -127061551 - B1_Mus2 SINE Alu -8 139 5 2 887 213 300 60 0 chrX 39588750 39588800 -127061496 - B1F SINE Alu -96 53 1 2 887 436 120 93 0 chrX 39590824 39590899 -127059397 - ID4 SINE ID -1 82 1 2 887 207 0 0 0 chrX 39590907 39590930 -127059366 + (T)n Simple_repeat Simple_repeat 1 23 0 2 887 259 136 0 0 chrX 39591481 39591525 -127058771 - L1M2 LINE L1 -560 5608 5565 2 887 805 294 112 60 chrX 39591620 39591958 -127058338 - L1M2 LINE L1 -746 5394 5015 2 887 4016 39 0 8 chrX 39591958 39592452 -127057844 - L1Md_F2 LINE L1 0 6582 6093 2 887 805 286 109 65 chrX 39592452 39592970 -127057326 - L1M2 LINE L1 -1124 5019 4479 2 887 222 309 102 31 chrX 39592978 39592995 -127057301 - ID_B1 SINE B4 -3 221 86 2 887 353 312 18 9 chrX 39592995 39593105 -127057191 - B1_Mur1 SINE Alu -34 115 5 2 887 297 51 0 0 chrX 39593106 39593145 -127057151 + (CAGT)n Simple_repeat Simple_repeat 2 40 0 2 887 459 0 0 0 chrX 39593146 39593197 -127057099 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 887 702 315 131 47 chrX 39593525 39593998 -127056298 - Lx8 LINE L1 -2 7471 6959 2 887 277 265 66 7 chrX 39594026 39594193 -127056103 - L1M5 LINE L1 -1423 4460 4278 2 887 241 302 34 23 chrX 39594431 39594519 -127055777 - RSINE1 SINE B4 -73 92 4 2 887 1122 68 0 0 chrX 39594530 39594678 -127055618 + (TTTC)n Simple_repeat Simple_repeat 1 148 0 2 887 1235 86 118 0 chrX 39594683 39594869 -127055427 - L1_Mus2 LINE L1 0 6566 6359 2 887 2599 70 3 0 chrX 39594869 39595200 -127055096 + L1_Mus2 LINE L1 6043 6374 -192 2 887 301 291 129 34 chrX 39595226 39595404 -127054892 - L1_Rod LINE L1 -1882 3965 3771 2 887 231 250 155 0 chrX 39595409 39595493 -127054803 - L1M2 LINE L1 -2412 3728 3632 2 887 491 237 190 10 chrX 39595541 39595831 -127054465 - L1M2 LINE L1 -2402 3478 3137 2 887 237 57 0 28 chrX 39595831 39595867 -127054429 + RLTR11A LTR ERVK 490 524 -4 2 887 402 211 174 67 chrX 39595933 39596111 -127054185 - B3A SINE B2 0 198 2 2 887 500 297 72 100 chrX 39596111 39597103 -127053193 - L1M2 LINE L1 -3003 3140 2121 2 887 359 347 42 78 chrX 39597319 39597678 -127052618 - L1MEf LINE L1 -4737 1463 1118 2 887 562 192 57 24 chrX 39597710 39597833 -127052463 - B1_Mus1 SINE Alu 0 148 22 2 887 22 56 0 0 chrX 39598690 39598726 -127051570 + AT_rich Low_complexity Low_complexity 1 36 0 2 887 585 0 0 0 chrX 39599646 39599711 -127050585 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 2 887 380 290 11 34 chrX 39599718 39599849 -127050447 - B1F1 SINE Alu -6 143 5 2 887 251 200 58 39 chrX 39600932 39600984 -127049312 - ID4_ SINE ID -28 55 3 2 887 303 28 0 0 chrX 39601660 39601696 -127048600 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 887 461 282 0 0 chrX 39601756 39601841 -127048455 - B1_Mur3 SINE Alu -63 86 2 2 887 226 406 8 47 chrX 39601898 39602027 -127048269 + ID_B1 SINE B4 72 195 -29 2 887 379 386 0 22 chrX 39601911 39602046 -127048250 + B1F1 SINE Alu 5 136 -13 2 887 339 151 0 0 chrX 39602783 39602836 -127047460 - HAL1-3A_ME LINE L1 -830 2028 1976 2 887 202 200 0 0 chrX 39602836 39602871 -127047425 + (CGTG)n Simple_repeat Simple_repeat 1 35 0 2 887 514 226 47 0 chrX 39602871 39602977 -127047319 - PB1D9 SINE Alu -3 117 7 2 887 788 150 60 0 chrX 39603001 39603134 -127047162 - B1_Mur4 SINE Alu -1 149 9 2 887 368 189 60 86 chrX 39603035 39603151 -127047145 - MT2B LTR ERVL -337 264 152 2 887 291 202 0 0 chrX 39603328 39603412 -127046884 + CT-rich Low_complexity Low_complexity 2 85 0 2 887 710 201 156 38 chrX 39604058 39604244 -127046052 - B3 SINE B2 -6 210 3 2 887 438 244 78 9 chrX 39604503 39604619 -127045677 - B3 SINE B2 -92 124 1 2 887 1140 50 0 0 chrX 39604670 39604809 -127045487 - B1_Mm SINE Alu -7 140 2 2 887 550 221 16 8 chrX 39605077 39605205 -127045091 - MTD LTR MaLR -4 415 287 2 887 228 288 0 17 chrX 39605221 39605281 -127045015 - MTD LTR MaLR -235 184 126 2 887 503 298 148 15 chrX 39605796 39606061 -127044235 - L1MA4 LINE L1 -364 5936 5603 2 887 28 48 0 0 chrX 39606115 39606157 -127044139 + AT_rich Low_complexity Low_complexity 1 42 0 2 887 318 265 137 96 chrX 39606319 39606465 -127043831 + MTD LTR MaLR 30 181 -238 2 887 204 125 0 0 chrX 39606586 39606618 -127043678 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 887 1172 42 0 0 chrX 39609085 39609227 -127041069 - B1_Mus1 SINE Alu -5 143 2 2 887 597 94 0 0 chrX 39609294 39609379 -127040917 + (TCTA)n Simple_repeat Simple_repeat 3 87 0 2 887 241 261 122 61 chrX 39609517 39609615 -127040681 + B1_Mur1 SINE Alu 40 143 -6 2 887 604 234 78 0 chrX 39610246 39610374 -127039922 - B1_Mur2 SINE Alu -9 140 3 2 887 606 151 92 0 chrX 39610601 39610720 -127039576 + B1_Mur2 SINE Alu 12 141 -8 2 887 513 281 127 64 chrX 39611601 39611931 -127038365 - L1MA8 LINE L1 -296 5995 5645 2 887 342 317 128 27 chrX 39612857 39613006 -127037290 - B4 SINE B4 0 292 129 2 887 270 313 0 0 chrX 39613509 39613576 -127036720 + PB1D10 SINE Alu 22 88 -29 2 887 25 0 0 0 chrX 39614415 39614440 -127035856 + AT_rich Low_complexity Low_complexity 1 25 0 2 887 426 320 12 44 chrX 39614627 39614787 -127035509 - B4A SINE B4 -130 162 8 2 887 194 304 132 38 chrX 39615134 39615240 -127035056 + MIR SINE MIR 32 147 -115 2 887 1264 73 11 38 chrX 39615313 39615498 -127034798 - B2_Mm2 SINE B2 -14 181 2 2 887 787 192 19 25 chrX 39616297 39616457 -127033839 + B2_Mm2 SINE B2 15 173 -22 2 887 1308 115 5 0 chrX 39616831 39617023 -127033273 + B2_Mm1t SINE B2 1 193 0 2 887 279 326 35 0 chrX 39617196 39617282 -127033014 - PB1D10 SINE Alu -28 89 1 2 887 238 252 199 61 chrX 39617282 39617330 -127032966 - MT2B LTR ERVL -440 161 96 2 887 30 59 0 0 chrX 39617634 39617685 -127032611 + AT_rich Low_complexity Low_complexity 1 51 0 2 887 1219 89 28 11 chrX 39617935 39618116 -127032180 + B2_Mm2 SINE B2 3 186 -9 2 887 262 264 83 0 chrX 39618567 39618639 -127031657 - PB1D10 SINE Alu -8 109 32 2 887 967 124 7 0 chrX 39618724 39618869 -127031427 - B1_Mus1 SINE Alu 0 148 3 2 887 325 317 25 144 chrX 39619953 39620237 -127030059 + L2c LINE L2 2680 2929 -490 2 887 511 277 117 41 chrX 39620320 39620516 -127029780 + L2c LINE L2 3177 3387 0 2 887 280 262 58 65 chrX 39621918 39622081 -127028215 + L2c LINE L2 3212 3349 -26 2 887 231 152 43 0 chrX 39622218 39622264 -127028032 - L4 LINE RTE 0 2029 1982 2 887 22 56 0 0 chrX 39622761 39622797 -127027499 + AT_rich Low_complexity Low_complexity 1 36 0 2 887 182 118 0 29 chrX 39622986 39623021 -127027275 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 3 887 597 240 60 106 chrX 39623058 39623244 -127027052 - RLTR40 LTR ERVK -533 284 103 3 887 560 178 142 37 chrX 39623244 39623378 -127026918 + B1_Mur3 SINE Alu 1 148 -1 3 887 597 240 60 106 chrX 39623378 39623475 -127026821 - RLTR40 LTR ERVK -715 102 14 3 887 22 35 0 0 chrX 39623498 39623527 -127026769 + AT_rich Low_complexity Low_complexity 1 29 0 3 887 216 0 0 0 chrX 39623754 39623778 -127026518 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 3 887 491 235 17 42 chrX 39623778 39623888 -127026408 - PB1D9 SINE Alu -12 108 2 3 887 22 35 0 0 chrX 39625069 39625098 -127025198 + AT_rich Low_complexity Low_complexity 1 29 0 3 887 210 254 132 15 chrX 39625342 39625410 -127024886 - ID4 SINE ID -6 77 2 3 887 288 0 0 0 chrX 39626030 39626062 -127024234 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 887 23 54 0 0 chrX 39626273 39626310 -127023986 + AT_rich Low_complexity Low_complexity 1 37 0 3 887 937 254 26 0 chrX 39626998 39627191 -127023105 + B3 SINE B2 6 203 -13 3 887 237 65 0 0 chrX 39627907 39627938 -127022358 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3 887 312 172 0 0 chrX 39628123 39628181 -127022115 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 3 887 35 0 0 0 chrX 39629318 39629353 -127020943 + AT_rich Low_complexity Low_complexity 1 35 0 3 887 244 305 24 140 chrX 39630998 39631162 -127019134 - MIR SINE MIR -81 181 37 3 887 473 224 28 126 chrX 39631212 39631355 -127018941 + B1F SINE Alu 1 129 -20 3 887 360 273 0 149 chrX 39631355 39631380 -127018916 + ID_B1 SINE B4 82 224 0 3 887 436 262 92 18 chrX 39631630 39631739 -127018557 + RSINE1 SINE B4 3 119 -46 3 887 21 0 0 0 chrX 39632137 39632158 -127018138 + AT_rich Low_complexity Low_complexity 1 21 0 3 887 412 314 127 35 chrX 39632240 39632758 -127017538 - L1ME2z LINE L1 -179 6265 5700 3 887 294 261 168 7 chrX 39633263 39633406 -127016890 - L1MA9 LINE L1 -319 6695 6530 3 887 397 200 141 47 chrX 39633451 39633625 -127016671 - L1MA9 LINE L1 -754 6116 5918 3 887 627 234 129 26 chrX 39633897 39634090 -127016206 - B3 SINE B2 0 216 4 3 887 1606 250 97 13 chrX 39634104 39634631 -127015665 - L1MA9 LINE L1 -1168 5677 5107 3 887 496 239 22 0 chrX 39634696 39634788 -127015508 - RSINE1 SINE B4 -17 148 55 3 887 211 196 250 0 chrX 39634764 39634820 -127015476 - B4 SINE B4 -215 77 8 3 887 431 274 201 22 chrX 39634933 39635157 -127015139 - L1MA9 LINE L1 -1853 4989 4726 3 887 36 53 0 0 chrX 39635171 39635228 -127015068 + AT_rich Low_complexity Low_complexity 1 57 0 3 887 599 172 146 6 chrX 39635229 39635387 -127014909 - L1MA9 LINE L1 -3741 3104 2925 3 887 1240 154 185 24 chrX 39635392 39635684 -127014612 - ORR1D1 LTR MaLR -35 339 1 3 887 363 282 56 8 chrX 39635908 39636033 -127014263 - Tigger1 DNA MER2_type -16 2402 2272 3 887 1566 228 54 44 chrX 39636034 39636424 -127013872 - Lx9 LINE L1 -295 7349 6956 3 887 785 225 24 12 chrX 39636455 39636680 -127013616 + L1_Rod LINE L1 5263 5492 -394 3 887 340 284 83 6 chrX 39636679 39636835 -127013461 - L1MA9 LINE L1 -4397 2452 2285 3 887 364 159 484 0 chrX 39636987 39637105 -127013191 + MTD LTR MaLR 231 405 -14 3 887 229 139 0 0 chrX 39637073 39637109 -127013187 + ORR1D2 LTR MaLR 326 361 -9 3 887 787 257 75 28 chrX 39637115 39637367 -127012929 + ORR1D2-int LTR MaLR 2 265 -993 3 887 319 224 138 78 chrX 39637363 39637545 -127012751 + ORR1D2-int LTR MaLR 770 980 -600 3 887 226 274 97 59 chrX 39637573 39637641 -127012655 - L1MC4 LINE L1 -595 7447 7381 3 887 1103 71 0 0 chrX 39637641 39637782 -127012514 - B1_Mm SINE Alu -5 142 2 3 887 226 274 97 59 chrX 39637782 39637861 -127012435 - L1MC4 LINE L1 -662 7380 7293 3 887 725 172 265 18 chrX 39637861 39638027 -127012269 + B3 SINE B2 1 207 -9 3 887 226 274 97 59 chrX 39638027 39638064 -127012232 - L1MC4 LINE L1 -750 7292 7256 3 887 1514 258 111 4 chrX 39638107 39638628 -127011668 - Lx8 LINE L1 -3 7470 6894 3 887 846 254 189 11 chrX 39638645 39639020 -127011276 - L1MC4 LINE L1 -987 7055 6655 3 887 348 250 77 15 chrX 39639082 39639212 -127011084 - L1MC4 LINE L1 -1699 6183 6046 3 887 407 100 0 14 chrX 39639281 39639352 -127010944 + (TATG)n Simple_repeat Simple_repeat 2 71 0 3 887 390 282 51 74 chrX 39639379 39639555 -127010741 - L1MC4 LINE L1 -2238 5644 5473 3 887 844 240 29 29 chrX 39639731 39639937 -127010359 - B3 SINE B2 -9 207 2 3 887 472 273 54 15 chrX 39639944 39640074 -127010222 - B1F1 SINE Alu -8 141 7 3 887 328 333 51 136 chrX 39640074 39640180 -127010116 - ID_B1 SINE B4 -8 216 1 3 887 433 234 309 16 chrX 39640235 39640426 -127009870 + Lx8 LINE L1 7226 7472 -1 3 887 1523 215 60 23 chrX 39640908 39641255 -127009041 + ORR1D2 LTR MaLR 10 369 -1 3 887 348 346 206 0 chrX 39641284 39641420 -127008876 + B3A SINE B2 35 198 0 3 887 609 121 171 8 chrX 39641436 39641553 -127008743 - B1_Mus2 SINE Alu 0 147 12 3 887 548 289 15 7 chrX 39641567 39641703 -127008593 + ID_B1 SINE B4 79 215 -9 3 887 305 257 81 81 chrX 39641703 39641718 -127008578 - YREP_Mm Unknown Unknown -1487 269 165 3 887 238 283 81 12 chrX 39641796 39641957 -127008339 + L1M2 LINE L1 1849 2020 -4829 3 887 444 280 163 42 chrX 39642005 39642195 -127008101 + B4A SINE B4 6 218 -74 3 887 600 301 40 85 chrX 39642428 39642852 -127007444 + L1MC1 LINE L1 5815 6219 -114 3 887 1400 253 100 15 chrX 39642853 39643242 -127007054 - Lx8 LINE L1 -358 7115 6694 3 887 486 108 0 0 chrX 39643419 39643493 -127006803 + (GA)n Simple_repeat Simple_repeat 1 74 0 3 887 787 246 79 39 chrX 39643544 39643902 -127006394 - Lx9 LINE L1 -234 7239 6816 3 887 647 286 58 0 chrX 39644164 39644318 -127005978 - RSINE1 SINE B4 -2 163 1 3 887 441 81 0 0 chrX 39644388 39644450 -127005846 + (TG)n Simple_repeat Simple_repeat 2 63 0 3 887 277 281 99 0 chrX 39645258 39645379 -127004917 - L1MA4A LINE L1 -386 5917 5785 3 887 246 304 92 33 chrX 39645409 39645562 -127004734 - L1MD2 LINE L1 -6367 180 19 3 887 268 327 26 17 chrX 39645646 39645761 -127004535 - PB1D10 SINE Alu -1 116 1 3 887 247 275 181 15 chrX 39645858 39645991 -127004305 + MLT1H LTR MaLR 390 544 -5 3 887 259 303 111 0 chrX 39646702 39646801 -127003495 + PB1D10 SINE Alu 1 110 -7 3 887 23 33 0 0 chrX 39646861 39646891 -127003405 + AT_rich Low_complexity Low_complexity 1 30 0 3 887 1037 267 73 78 chrX 39647011 39647381 -127002915 - ORR1D2 LTR MaLR 0 370 3 3 887 635 293 41 16 chrX 39647384 39647627 -127002669 + L1MD3 LINE L1 7727 7975 -20 3 887 322 319 26 46 chrX 39648154 39648285 -127002011 + L1M2 LINE L1 5124 5250 -893 3 887 820 288 90 29 chrX 39648285 39648629 -127001667 + MLT1A0 LTR MaLR 1 365 0 3 887 322 319 26 46 chrX 39648629 39648648 -127001648 + L1M2 LINE L1 5251 5270 -873 3 887 715 143 0 0 chrX 39648653 39648765 -127001531 + B1_Mur2 SINE Alu 3 114 -35 3 887 3099 66 169 2 chrX 39648926 39649365 -127000931 + RLTR1B LTR ERV1 1 512 0 3 887 2713 104 198 4 chrX 39649404 39649868 -127000428 - Lx LINE L1 -3 6651 6098 3 887 993 130 0 0 chrX 39649879 39650025 -127000271 - B1_Mus1 SINE Alu -1 147 2 3 887 2147 126 0 148 chrX 39650200 39650667 -126999629 + RMER10B LTR ERVL 1 398 0 3 887 806 239 94 124 chrX 39651111 39651483 -126998813 - MTE2a LTR MaLR -10 369 9 3 887 325 216 81 20 chrX 39651485 39651584 -126998712 - ORR1D1 LTR MaLR -1 373 269 3 887 1919 87 46 18 chrX 39651591 39651871 -126998425 + L1Md_F2 LINE L1 5989 6276 -306 3 887 1180 242 47 38 chrX 39651871 39652191 -126998105 - ORR1D2 LTR MaLR -58 320 1 3 887 191 146 0 24 chrX 39652760 39652802 -126997494 + T-rich Low_complexity Low_complexity 1 41 0 3 887 1551 143 214 20 chrX 39652802 39653144 -126997152 + RLTR23 LTR ERV1 1 408 -22 3 887 37589 50 4 11 chrX 39653151 39659332 -126990964 - L1Md_F2 LINE L1 -11 6571 441 3 887 1514 28 0 0 chrX 39659350 39659560 -126990736 - L1Md_F LINE L1 -5394 1166 957 3 887 479 232 39 72 chrX 39659571 39659752 -126990544 - RLTR40 LTR ERVK -519 298 124 3 887 300 279 12 0 chrX 39660755 39660841 -126989455 + PB1D9 SINE Alu 28 114 -6 3 887 304 290 75 69 chrX 39661152 39661487 -126988809 - L1MDb LINE L1 -5127 1375 1034 3 887 1210 42 0 0 chrX 39661559 39661701 -126988595 + B1_Mus1 SINE Alu 2 143 -5 3 887 513 250 72 8 chrX 39662124 39662249 -126988047 + RSINE1 SINE B4 16 148 -17 3 887 369 0 0 0 chrX 39662253 39662294 -126988002 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 887 650 273 14 7 chrX 39662391 39662535 -126987761 + B3A SINE B2 23 167 -31 3 887 1063 215 23 0 chrX 39662598 39662812 -126987484 + URR1B DNA MER1_type 1 219 -6 3 887 394 331 100 103 chrX 39663872 39664020 -126986276 + ORR1E LTR MaLR 3 163 -196 3 887 2164 122 57 179 chrX 39664020 39664528 -126985768 - RLTR41 LTR ERV1 0 446 1 3 887 394 331 100 103 chrX 39664528 39664679 -126985617 + ORR1E LTR MaLR 164 301 -58 3 887 2003 162 97 34 chrX 39664699 39665075 -126985221 - Lx6 LINE L1 -1401 6059 5690 3 887 279 0 0 0 chrX 39665075 39665106 -126985190 + (TAA)n Simple_repeat Simple_repeat 2 32 0 3 887 2003 163 97 21 chrX 39665106 39665300 -126984996 - Lx6 LINE L1 -1771 5689 5455 3 887 789 264 27 62 chrX 39665323 39665619 -126984677 + Lx6 LINE L1 6094 6594 -866 3 887 1456 242 151 10 chrX 39665628 39666109 -126984187 + Lx6 LINE L1 6558 7460 0 3 887 553 90 0 22 chrX 39666114 39666205 -126984091 + (GAAA)n Simple_repeat Simple_repeat 4 92 0 3 887 5934 222 41 29 chrX 39666205 39667441 -126982855 + Lx6 LINE L1 6040 7289 -171 3 887 286 272 67 10 chrX 39667713 39667817 -126982479 + Lx7 LINE L1 7585 7694 -2 3 887 206 208 38 0 chrX 39668153 39668206 -126982090 + T-rich Low_complexity Low_complexity 2 56 0 3 887 644 271 28 94 chrX 39668234 39668446 -126981850 - B3A SINE B2 0 198 1 3 887 393 294 68 122 chrX 39668458 39668721 -126981575 + L2b LINE L2 3047 3295 -80 3 887 2329 90 23 64 chrX 39669007 39669350 -126980946 + ORR1A4 LTR MaLR 1 329 0 3 887 339 274 124 33 chrX 39669363 39669484 -126980812 - B1F2 SINE Alu -17 132 1 3 887 1045 211 9 67 chrX 39669503 39669727 -126980569 - B3 SINE B2 -3 213 3 3 887 250 350 0 0 chrX 39669734 39669814 -126980482 - PB1 SINE Alu 0 127 48 3 887 685 248 50 0 chrX 39669828 39669969 -126980327 + RSINE1 SINE B4 3 150 -15 3 887 384 152 0 0 chrX 39669974 39670040 -126980256 + (TGAA)n Simple_repeat Simple_repeat 3 68 0 3 887 478 0 16 16 chrX 39670138 39670201 -126980095 + (TCTA)n Simple_repeat Simple_repeat 2 64 0 4 887 618 242 0 48 chrX 39670211 39670337 -126979959 - ID_B1 SINE B4 -11 213 94 4 887 935 154 35 0 chrX 39670339 39670482 -126979814 + B1_Mur4 SINE Alu 1 148 -2 4 887 220 122 24 0 chrX 39670588 39670629 -126979667 + (TTG)n Simple_repeat Simple_repeat 1 42 0 4 887 1246 55 7 0 chrX 39670629 39670774 -126979522 - B1_Mus1 SINE Alu -2 146 1 4 887 407 317 40 73 chrX 39670882 39671059 -126979237 + B4 SINE B4 2 172 -120 4 887 1498 234 9 28 chrX 39671095 39671416 -126978880 + MTD LTR MaLR 3 317 -102 4 887 1643 269 37 9 chrX 39671416 39671873 -126978423 + Lx7 LINE L1 6836 7305 -391 4 887 378 0 0 0 chrX 39671995 39672037 -126978259 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 887 1177 83 7 0 chrX 39672428 39672572 -126977724 + B1_Mus2 SINE Alu 1 145 -2 4 887 367 260 0 0 chrX 39672635 39672708 -126977588 - ID4 SINE ID -6 77 5 4 887 315 346 0 0 chrX 39672733 39672814 -126977482 + ID4 SINE ID 2 82 -1 4 887 474 18 0 0 chrX 39673620 39673675 -126976621 + (CTG)n Simple_repeat Simple_repeat 3 57 0 4 887 203 398 23 47 chrX 39674747 39674876 -126975420 + L2b LINE L2 3242 3367 -8 4 887 206 175 50 0 chrX 39674951 39674991 -126975305 + GA-rich Low_complexity Low_complexity 3 44 0 4 887 1359 67 0 0 chrX 39674991 39675170 -126975126 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 4 887 534 175 500 7 chrX 39675181 39675325 -126974971 + B3 SINE B2 2 216 0 4 887 905 304 108 24 chrX 39676012 39676390 -126973906 - MLT1D LTR MaLR -43 462 53 4 887 477 212 50 144 chrX 39676398 39676445 -126973851 - B1_Mur4 SINE Alu 0 150 123 4 887 2879 86 67 8 chrX 39676445 39676831 -126973465 - Lx3_Mus LINE L1 0 7009 6601 4 887 482 212 50 144 chrX 39676831 39676943 -126973353 - B1_Mus1 SINE Alu -28 122 6 4 887 230 372 108 8 chrX 39677079 39677209 -126973087 + MIRm SINE MIR 133 275 -1 4 887 25 0 0 0 chrX 39677411 39677436 -126972860 + AT_rich Low_complexity Low_complexity 1 25 0 4 887 623 239 10 130 chrX 39677479 39677686 -126972610 - B3A SINE B2 -16 182 1 4 887 253 325 25 0 chrX 39677782 39677862 -126972434 - B4A SINE B4 -169 123 42 4 887 208 318 144 23 chrX 39678116 39678248 -126972048 + MIRb SINE MIR 60 207 -61 4 887 279 330 58 0 chrX 39678354 39678457 -126971839 + MER63B DNA AcHobo 327 435 -1 4 887 530 86 12 0 chrX 39678689 39678770 -126971526 + (GA)n Simple_repeat Simple_repeat 1 82 0 4 887 37 23 0 0 chrX 39679193 39679237 -126971059 + AT_rich Low_complexity Low_complexity 1 44 0 4 887 5573 186 49 30 chrX 39679238 39679472 -126970824 - Lx5 LINE L1 -3 7047 6821 4 887 257 75 25 0 chrX 39679472 39679512 -126970784 + (CAGG)n Simple_repeat Simple_repeat 2 42 0 4 887 5573 187 50 33 chrX 39679512 39680412 -126969884 - Lx5 LINE L1 -230 6820 5908 4 887 252 0 0 0 chrX 39680419 39680447 -126969849 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 4 887 563 250 54 34 chrX 39680447 39680588 -126969708 - B4 SINE B4 -75 217 72 4 887 4041 146 60 43 chrX 39680588 39681274 -126969022 - Lx5 LINE L1 -1093 5907 5202 4 887 285 202 89 0 chrX 39681271 39681350 -126968946 + L1M4 LINE L1 3377 3462 -2684 4 887 3593 50 0 0 chrX 39681354 39681754 -126968542 + MTB LTR MaLR 1 400 0 4 887 302 218 21 174 chrX 39681776 39681932 -126968364 - MTEa LTR MaLR -10 369 217 4 887 3952 53 14 62 chrX 39681932 39682450 -126967846 - MT2_Mm LTR ERVL 0 493 1 4 887 246 297 34 150 chrX 39682450 39682606 -126967690 - MTEa LTR MaLR -158 216 93 4 887 830 27 68 0 chrX 39682852 39682998 -126967298 + (TTCTCC)n Simple_repeat Simple_repeat 2 157 0 4 887 396 141 150 0 chrX 39683015 39683093 -126967203 - B1_Mur2 SINE Alu -6 143 54 4 887 830 27 68 0 chrX 39683459 39683605 -126966691 + (TTCTCC)n Simple_repeat Simple_repeat 2 157 0 4 887 613 209 73 58 chrX 39683622 39683759 -126966537 - B1_Mur2 SINE Alu -6 143 5 4 887 1080 269 92 43 chrX 39683764 39684363 -126965933 + L1M4 LINE L1 3977 4604 -1542 4 887 695 265 53 68 chrX 39684374 39684637 -126965659 + MTD LTR MaLR 14 272 -147 4 887 6090 89 12 12 chrX 39684637 39685500 -126964796 + L1Md_F LINE L1 380 1205 -5411 4 887 793 102 8 52 chrX 39685480 39685614 -126964682 + L1Md_F LINE L1 2726 2853 -3030 4 887 212 167 24 0 chrX 39685614 39685656 -126964640 + C-rich Low_complexity Low_complexity 6 48 0 4 887 461 266 28 0 chrX 39686735 39686844 -126963452 - Helitron3Na_Mam RC Helitron -53 433 322 4 887 653 254 141 6 chrX 39687536 39687706 -126962590 + B3A SINE B2 2 194 -4 4 887 253 340 27 134 chrX 39687793 39687980 -126962316 + ID_B1 SINE B4 1 167 -57 4 887 243 287 22 54 chrX 39687981 39688073 -126962223 - Helitron3Na_Mam RC Helitron -367 119 31 4 887 302 357 41 0 chrX 39688363 39688461 -126961835 - L2a LINE L2 -24 3402 3301 4 887 236 266 112 12 chrX 39688469 39688549 -126961747 + MIRb SINE MIR 112 199 -69 4 887 22 35 0 0 chrX 39688615 39688644 -126961652 + AT_rich Low_complexity Low_complexity 1 29 0 4 887 2495 105 3 3 chrX 39689376 39689702 -126960594 - ORR1A3 LTR MaLR 0 326 1 4 887 786 276 47 5 chrX 39689745 39689938 -126960358 - B3 SINE B2 -14 202 2 4 887 353 296 148 6 chrX 39690330 39690667 -126959629 - L1MC4 LINE L1 -5 8037 7614 4 887 847 278 16 85 chrX 39690798 39691046 -126959250 + B4A SINE B4 2 232 -60 4 887 590 300 77 27 chrX 39691046 39691344 -126958952 - L1MC4 LINE L1 -592 7450 7138 4 887 317 286 51 0 chrX 39691370 39691468 -126958828 - MLT1G3 LTR MaLR 0 579 477 4 887 908 324 53 68 chrX 39691490 39691889 -126958407 - MLT1G3 LTR MaLR -217 378 5 4 887 623 238 33 13 chrX 39691899 39692052 -126958244 - L1MC4 LINE L1 -957 7085 6930 4 887 21 0 0 0 chrX 39692262 39692283 -126958013 + AT_rich Low_complexity Low_complexity 1 21 0 4 887 231 36 0 0 chrX 39692419 39692447 -126957849 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 4 887 325 336 61 0 chrX 39692449 39692580 -126957716 - B1F SINE Alu -2 147 9 4 887 581 316 35 0 chrX 39692467 39692638 -126957658 - ID_B1 SINE B4 -21 203 27 4 887 1326 249 27 102 chrX 39692679 39693081 -126957215 + MTD LTR MaLR 48 419 0 4 887 2179 133 9 66 chrX 39693505 39693852 -126956444 - ORR1A4 LTR MaLR 0 329 3 4 887 329 325 46 29 chrX 39694036 39694210 -126956086 - HAL1 LINE L1 -1801 706 530 4 887 374 316 148 78 chrX 39694237 39694649 -126955647 - HAL1 LINE L1 -2065 442 2 4 887 734 286 56 39 chrX 39695055 39695361 -126954935 - Lx8 LINE L1 0 7473 7163 4 887 184 167 48 0 chrX 39696110 39696152 -126954144 - MIRc SINE MIR 0 268 225 4 887 481 264 26 26 chrX 39698210 39698362 -126951934 + L1M2 LINE L1 4727 4878 -1265 4 887 1887 197 21 21 chrX 39698362 39698402 -126951894 + ORR1D1 LTR MaLR 1 37 -337 4 887 2261 186 67 60 chrX 39698402 39698780 -126951516 + RLTR28 LTR ERVL 1 397 -127 4 887 881 44 0 9 chrX 39698780 39698895 -126951401 + (TTC)n Simple_repeat Simple_repeat 3 116 0 4 887 2261 186 67 60 chrX 39698895 39699036 -126951260 + RLTR28 LTR ERVL 398 524 0 4 887 1887 197 21 21 chrX 39699036 39699369 -126950927 + ORR1D1 LTR MaLR 38 374 0 4 887 293 255 109 48 chrX 39699383 39699548 -126950748 + L1M2 LINE L1 4887 5061 -1082 4 887 5240 154 79 9 chrX 39699727 39700688 -126949608 - RLTR25B LTR ERVK 0 1028 1 4 887 1864 208 14 74 chrX 39700926 39701106 -126949190 - MTD LTR MaLR -14 405 250 4 887 2150 40 0 4 chrX 39701106 39701354 -126948942 - L1Md_F2 LINE L1 -15 6567 6321 4 887 1864 208 14 74 chrX 39701354 39701604 -126948692 - MTD LTR MaLR -170 249 1 4 887 753 263 58 0 chrX 39701625 39701796 -126948500 + B3 SINE B2 2 182 -34 4 887 868 275 18 22 chrX 39701819 39702042 -126948254 + ID_B1 SINE B4 3 224 0 4 887 474 291 12 112 chrX 39702229 39702306 -126947990 - MTE2b LTR MaLR -222 157 90 4 887 342 0 0 0 chrX 39702306 39702344 -126947952 + (TC)n Simple_repeat Simple_repeat 1 38 0 4 887 474 291 12 112 chrX 39702344 39702436 -126947860 - MTE2b LTR MaLR -290 89 5 4 887 528 243 186 18 chrX 39703053 39703416 -126946880 + L1M2 LINE L1 5132 5563 -593 4 887 1086 133 0 0 chrX 39703479 39703691 -126946605 + (TTTC)n Simple_repeat Simple_repeat 1 212 0 4 887 621 69 0 0 chrX 39703693 39703780 -126946516 + (TTCC)n Simple_repeat Simple_repeat 3 89 0 4 887 267 271 22 0 chrX 39703794 39703862 -126946434 - MLT1A1 LTR MaLR -78 330 228 4 887 275 152 0 0 chrX 39703915 39703961 -126946335 - L1MD LINE L1 -858 5288 5243 4 887 552 108 12 0 chrX 39703976 39704059 -126946237 + (TTCC)n Simple_repeat Simple_repeat 1 84 0 4 887 836 172 6 0 chrX 39704059 39704228 -126946068 + CT-rich Low_complexity Low_complexity 4 173 0 4 887 967 290 77 140 chrX 39704259 39704504 -126945792 - L1MD LINE L1 -1516 4630 4375 4 887 545 44 0 0 chrX 39704504 39704572 -126945724 + L1_Mus2 LINE L1 6499 6566 0 4 887 967 290 77 140 chrX 39704572 39704593 -126945703 - L1MD LINE L1 -1772 4374 4362 4 887 186 71 0 0 chrX 39704593 39704621 -126945675 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 4 887 1039 290 77 140 chrX 39704621 39705376 -126944920 - L1MD LINE L1 -1785 4361 3672 4 887 882 110 79 22 chrX 39705413 39705530 -126944766 + B1_Mus2 SINE Alu 1 116 -31 4 887 378 0 0 0 chrX 39705530 39705572 -126944724 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 887 882 110 79 22 chrX 39705572 39705593 -126944703 + B1_Mus2 SINE Alu 117 147 0 4 887 183 376 31 52 chrX 39706482 39706673 -126943623 - MIRb SINE MIR -38 230 44 4 887 264 30 0 0 chrX 39707069 39707102 -126943194 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 887 329 291 101 36 chrX 39707102 39707260 -126943036 - MIR SINE MIR -81 187 19 4 887 493 263 112 18 chrX 39707260 39707430 -126942866 - MER3 DNA MER1_type -22 187 2 4 887 664 303 6 12 chrX 39707630 39707797 -126942499 + B3A SINE B2 4 169 -29 4 887 213 39 0 0 chrX 39707804 39707830 -126942466 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 887 513 346 8 0 chrX 39707868 39707998 -126942298 + RSINE1 SINE B4 21 151 -14 4 887 752 180 56 35 chrX 39708186 39708330 -126941966 - B1_Mus1 SINE Alu 0 148 2 4 887 416 284 50 33 chrX 39708341 39708461 -126941835 - B1F SINE Alu -8 141 20 4 887 250 254 0 0 chrX 39708768 39708823 -126941473 - B3 SINE B2 -7 209 155 4 887 287 217 0 42 chrX 39709021 39709093 -126941203 + 4.5SRNA scRNA scRNA 18 86 -8 4 887 295 169 90 30 chrX 39709041 39709108 -126941188 + RLTR25B LTR ERVK 439 509 -519 4 887 851 29 0 0 chrX 39709048 39709151 -126941145 + B1_Mm SINE Alu 45 147 0 4 887 393 22 0 0 chrX 39709151 39709197 -126941099 + (A)n Simple_repeat Simple_repeat 1 46 0 4 887 727 212 41 0 chrX 39709318 39709464 -126940832 - B3 SINE B2 -64 152 1 4 887 234 0 0 0 chrX 39709519 39709545 -126940751 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 887 438 342 123 0 chrX 39709548 39709694 -126940602 - RSINE1 SINE B4 0 165 2 4 887 683 160 0 40 chrX 39709694 39709815 -126940481 - RLTR20A LTR ERVK -411 130 15 5 887 329 49 0 0 chrX 39709812 39709853 -126940443 - U2 snRNA snRNA -147 41 1 5 887 5215 42 12 0 chrX 39710835 39711424 -126938872 + L1_Mus1 LINE L1 5972 6567 0 5 887 604 265 164 112 chrX 39711633 39712071 -126938225 - MER31B LTR ERV1 0 466 6 5 887 376 276 33 138 chrX 39713044 39713225 -126937071 + Lx7 LINE L1 7117 7278 -418 5 887 351 0 0 0 chrX 39713225 39713264 -126937032 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 887 396 0 0 0 chrX 39713264 39713307 -126936989 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 887 180 238 0 0 chrX 39713360 39713423 -126936873 + T-rich Low_complexity Low_complexity 1 63 0 5 887 229 325 0 0 chrX 39713511 39713591 -126936705 + G-rich Low_complexity Low_complexity 1 80 0 5 887 261 0 0 0 chrX 39713731 39713760 -126936536 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 5 888 252 346 43 99 chrX 39715064 39715205 -126935091 + MER91A DNA Tip100 57 189 -7 5 888 238 180 81 16 chrX 39715270 39715332 -126934964 + B1F2 SINE Alu 63 128 -21 5 888 243 280 25 74 chrX 39715383 39715464 -126934832 - ID4_ SINE ID 0 83 7 5 888 460 284 29 0 chrX 39715471 39715573 -126934723 - B1F SINE Alu -9 140 36 5 888 421 305 69 0 chrX 39715548 39715679 -126934617 - B1F SINE Alu -4 145 6 5 888 327 325 51 26 chrX 39715848 39715965 -126934331 - PB1D7 SINE Alu 0 120 1 5 888 514 263 54 71 chrX 39716059 39716243 -126934053 - MER5A DNA MER1_type -3 186 6 5 888 960 279 8 8 chrX 39718053 39718306 -126931990 + RMER5 LTR ERV1 271 523 -11 5 888 1031 323 105 9 chrX 39718313 39718732 -126931564 - MLT1D LTR MaLR -16 489 31 5 888 252 0 0 0 chrX 39719385 39719413 -126930883 + (ATG)n Simple_repeat Simple_repeat 3 30 0 5 888 379 223 114 3 chrX 39719834 39719957 -126930339 - L1MA4A LINE L1 -368 5935 5801 5 888 530 239 124 19 chrX 39720193 39720362 -126929934 - B3A SINE B2 -14 184 1 5 888 283 314 19 19 chrX 39720366 39720522 -126929774 - L1MA4A LINE L1 -816 5327 5172 5 888 214 227 0 26 chrX 39720539 39720616 -126929680 + (TG)n Simple_repeat Simple_repeat 2 76 0 5 888 684 287 0 7 chrX 39720659 39720810 -126929486 - MER5A DNA MER1_type -26 163 14 5 888 515 244 90 15 chrX 39720813 39720946 -126929350 - RSINE1 SINE B4 -22 143 1 5 888 690 306 58 22 chrX 39720946 39721257 -126929039 - L1MA4A LINE L1 -960 5183 4862 5 888 494 239 118 80 chrX 39721254 39721518 -126928778 - L1MA4A LINE L1 -2701 3442 3159 5 888 2188 170 27 8 chrX 39721518 39721885 -126928411 + ORR1D1 LTR MaLR 1 374 0 5 888 494 274 75 25 chrX 39721885 39722038 -126928258 - L1MA4A LINE L1 -2985 3158 2922 5 888 1530 319 69 10 chrX 39722126 39722394 -126927902 + Lx8 LINE L1 6628 6916 -557 5 888 2482 168 105 10 chrX 39722394 39722439 -126927857 - MT2A LTR ERVL 0 533 489 5 888 197 33 33 0 chrX 39722439 39722469 -126927827 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 888 2482 168 105 10 chrX 39722469 39722910 -126927386 - MT2A LTR ERVL -45 488 1 5 888 1334 319 69 10 chrX 39722910 39723250 -126927046 + Lx8 LINE L1 6917 7272 -201 5 888 183 146 0 0 chrX 39723306 39723347 -126926949 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 888 371 229 0 0 chrX 39723499 39723569 -126926727 + ID_B1 SINE B4 80 149 -75 5 888 234 357 59 30 chrX 39723530 39723631 -126926665 - B1F1 SINE Alu -44 105 2 5 888 4552 158 140 34 chrX 39724143 39724956 -126925340 - RLTR25B LTR ERVK 0 1028 118 5 888 333 0 0 0 chrX 39724956 39724993 -126925303 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 888 4552 158 140 34 chrX 39724993 39725109 -126925187 - RLTR25B LTR ERVK -911 117 2 5 888 919 209 69 28 chrX 39725138 39725355 -126924941 - URR1A DNA MER1_type 0 226 1 5 888 509 358 12 0 chrX 39726057 39726219 -126924077 - RSINE1 SINE B4 0 165 2 5 888 629 292 76 15 chrX 39726678 39726876 -126923420 + MTD LTR MaLR 3 212 -207 5 888 704 116 0 76 chrX 39726883 39727014 -126923282 + B1_Mur4 SINE Alu 28 148 -2 5 888 180 182 0 0 chrX 39727014 39727058 -126923238 + (CAA)n Simple_repeat Simple_repeat 1 44 0 5 888 542 258 230 0 chrX 39727058 39727236 -126923060 + MTD LTR MaLR 199 417 -2 5 888 1019 306 43 25 chrX 39727652 39728051 -126922245 - Lx8 LINE L1 0 7473 7068 5 888 880 252 28 5 chrX 39728052 39728263 -126922033 + B3 SINE B2 1 216 0 5 888 797 218 7 0 chrX 39728271 39728418 -126921878 + B1_Mur2 SINE Alu 2 149 0 5 888 270 341 49 28 chrX 39728546 39728736 -126921560 + MIRb SINE MIR 1 197 -79 5 888 433 302 73 13 chrX 39728771 39728922 -126921374 - RSINE1 SINE B4 -3 162 3 5 888 1158 49 21 0 chrX 39729022 39729166 -126921130 - B1_Mus1 SINE Alu 0 148 2 5 888 28 0 0 0 chrX 39729188 39729216 -126921080 + AT_rich Low_complexity Low_complexity 1 28 0 5 888 4299 79 12 16 chrX 39729216 39729794 -126920502 - Lx3_Mus LINE L1 0 7009 6434 5 888 406 212 104 83 chrX 39729802 39729946 -126920350 - B2_Mm2 SINE B2 -9 186 40 5 888 370 335 68 75 chrX 39730248 39730542 -126919754 + MLT1A0 LTR MaLR 30 321 -44 5 888 2319 135 77 2 chrX 39730546 39730947 -126919349 - Lx4A LINE L1 -51 7007 6577 5 888 894 134 12 6 chrX 39730963 39731128 -126919168 + CT-rich Low_complexity Low_complexity 1 166 0 5 888 312 341 40 51 chrX 39731129 39731305 -126918991 - HAL1-3A_ME LINE L1 -419 2439 2266 5 888 308 297 85 12 chrX 39731472 39731731 -126918565 - L1MA6 LINE L1 -2 6298 6021 5 888 825 258 51 0 chrX 39731841 39732019 -126918277 - B3 SINE B2 -29 187 1 5 888 316 246 30 3 chrX 39732043 39732160 -126918136 - L1MA6 LINE L1 -734 5437 5320 5 888 3476 258 89 11 chrX 39732206 39733285 -126917011 - Lx8 LINE L1 -5 7468 6306 5 888 21 0 0 0 chrX 39733791 39733812 -126916484 + GC_rich Low_complexity Low_complexity 1 21 0 5 888 899 215 10 16 chrX 39733812 39734006 -126916290 - RLTR17 LTR ERVK -326 366 174 5 888 739 224 68 29 chrX 39734054 39734261 -126916035 - B3 SINE B2 0 216 2 5 888 402 362 31 23 chrX 39734266 39734526 -126915770 - L1M4 LINE L1 -4467 2179 1918 5 888 804 195 155 11 chrX 39734541 39734728 -126915568 - B3 SINE B2 -1 215 2 5 888 1658 290 24 85 chrX 39734738 39735620 -126914676 - Lx9 LINE L1 -1 7472 6770 5 888 499 283 98 43 chrX 39735816 39736018 -126914278 - L1M4 LINE L1 -4899 1747 1531 5 888 1943 101 15 42 chrX 39736018 39736367 -126913929 - L1Md_F2 LINE L1 0 6582 6262 5 888 499 275 105 36 chrX 39736367 39736677 -126913619 - L1M4 LINE L1 -5008 1534 1192 5 888 7059 95 20 1 chrX 39736683 39738318 -126911978 - L1_Mus3 LINE L1 -1 6637 4971 5 888 491 348 30 18 chrX 39738334 39738501 -126911795 - B3A SINE B2 -28 170 2 5 888 318 289 95 74 chrX 39738505 39738883 -126911413 - L1M4 LINE L1 -5338 1204 819 5 888 1166 195 18 0 chrX 39739111 39739332 -126910964 - URR1B DNA MER1_type 0 225 1 5 888 276 299 0 25 chrX 39739663 39739742 -126910554 - ID4 SINE ID -4 79 3 5 888 387 272 19 28 chrX 39739821 39739927 -126910369 - PB1 SINE Alu -2 125 21 5 888 3003 273 66 60 chrX 39740094 39741274 -126909022 + Lx7 LINE L1 6223 7409 -287 5 888 461 252 43 9 chrX 39741657 39741773 -126908523 + PB1D7 SINE Alu 1 120 0 5 888 748 156 104 0 chrX 39742065 39742200 -126908096 + B1_Mur4 SINE Alu 2 150 0 5 888 527 314 86 109 chrX 39742211 39742262 -126908034 - LTR82A LTR ERVL -445 427 378 5 888 3690 34 5 0 chrX 39742262 39742701 -126907595 + L1Md_T LINE L1 6142 6582 0 5 888 527 314 86 109 chrX 39742701 39743081 -126907215 - LTR82A LTR ERVL -495 377 6 5 888 562 312 75 46 chrX 39743317 39743599 -126906697 + B4A SINE B4 1 290 -2 5 888 3170 58 8 0 chrX 39744014 39744410 -126905886 - MTB LTR MaLR 0 400 2 5 888 6519 118 94 28 chrX 39744410 39744539 -126905757 - MTB-int LTR MaLR -17 1241 1074 5 888 1193 62 0 0 chrX 39744539 39744683 -126905613 + B1_Mus2 SINE Alu 1 144 -3 5 888 336 34 17 33 chrX 39744683 39744743 -126905553 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 5 888 6519 118 94 28 chrX 39744743 39745775 -126904521 - MTB-int LTR MaLR -185 1073 3 5 888 1099 84 0 0 chrX 39745774 39745917 -126904379 - MTB LTR MaLR 0 400 258 5 888 734 131 0 0 chrX 39745902 39746009 -126904287 + MTA_Mm LTR MaLR 205 311 -85 5 888 613 300 123 16 chrX 39746136 39746387 -126903909 - B4A SINE B4 -12 280 3 5 888 386 289 155 12 chrX 39747229 39747390 -126902906 - MIRb SINE MIR -8 260 77 5 888 390 252 135 7 chrX 39747384 39747532 -126902764 + MIR3 SINE MIR 37 203 -5 5 888 925 150 24 6 chrX 39747719 39747887 -126902409 - Lx2B LINE L1 0 7000 6830 5 888 494 283 89 38 chrX 39748075 39748288 -126902008 - L2a LINE L2 -12 3414 3191 5 888 1012 316 46 51 chrX 39748343 39748737 -126901559 - MLT2F LTR ERVL 0 663 272 5 888 197 293 147 0 chrX 39749072 39749147 -126901149 + MIR SINE MIR 167 252 -10 5 888 572 312 97 47 chrX 39749645 39750048 -126900248 + L4 LINE RTE 1607 2029 0 5 888 530 286 47 7 chrX 39750589 39750737 -126899559 - RSINE1 SINE B4 -8 157 4 5 888 2246 167 154 71 chrX 39750843 39751480 -126898816 - RMER6C LTR ERVK 0 690 1 5 888 216 281 0 68 chrX 39752873 39752888 -126897408 + polypyrimidine Low_complexity Low_complexity 70 83 0 5 888 660 87 0 0 chrX 39752888 39752980 -126897316 + (TCCC)n Simple_repeat Simple_repeat 1 92 0 5 888 776 65 0 9 chrX 39752980 39753088 -126897208 + (TTTCC)n Simple_repeat Simple_repeat 2 108 0 5 888 216 281 0 68 chrX 39753088 39753159 -126897137 + polypyrimidine Low_complexity Low_complexity 3 69 0 5 888 303 151 113 0 chrX 39753163 39753216 -126897080 - PB1D10 SINE Alu -6 111 53 5 888 1473 238 118 27 chrX 39753258 39753784 -126896512 - Lx9 LINE L1 -22 7622 7049 5 888 1466 223 51 0 chrX 39753862 39754198 -126896098 - Lx9 LINE L1 -875 6769 6417 5 888 303 28 0 0 chrX 39754198 39754234 -126896062 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 5 888 977 299 83 0 chrX 39754234 39754294 -126896002 - Lx8 LINE L1 -1199 6274 6200 5 888 371 283 56 28 chrX 39754472 39754650 -126895646 - Lx9 LINE L1 -1620 6024 5842 5 888 905 202 55 28 chrX 39754655 39754945 -126895351 - Lx9 LINE L1 -499 5348 5051 5 888 249 278 27 14 chrX 39754950 39755023 -126895273 - B1F SINE Alu -72 77 4 5 888 219 88 0 0 chrX 39755505 39755539 -126894757 + (TGGGGG)n Simple_repeat Simple_repeat 6 39 0 5 888 401 43 0 68 chrX 39755681 39755755 -126894541 - B2_Mm2 SINE B2 0 195 127 5 888 557 120 11 0 chrX 39755800 39755892 -126894404 + (TTTC)n Simple_repeat Simple_repeat 1 93 0 5 888 273 198 24 12 chrX 39755879 39755961 -126894335 + C-rich Low_complexity Low_complexity 4 86 0 5 888 836 142 0 13 chrX 39755959 39756109 -126894187 + CT-rich Low_complexity Low_complexity 3 150 0 6 888 601 139 0 0 chrX 39757098 39757199 -126893097 + Lx5 LINE L1 5043 5143 -734 6 888 586 125 54 0 chrX 39757200 39757312 -126892984 - L1_Mur2 LINE L1 -1210 4667 4550 6 888 4117 150 50 11 chrX 39757307 39758055 -126892241 + Lx5 LINE L1 5675 6451 -599 6 888 212 0 36 0 chrX 39758067 39758095 -126892201 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 6 888 2111 107 20 15 chrX 39758109 39758451 -126891845 - Lx4B LINE L1 -32 7026 6683 6 888 2954 231 3 3 chrX 39758451 39759056 -126891240 + Lx5 LINE L1 6446 7050 0 6 888 22 0 0 0 chrX 39759212 39759234 -126891062 + AT_rich Low_complexity Low_complexity 1 22 0 6 888 461 313 37 63 chrX 39759238 39759410 -126890886 + B3A SINE B2 3 171 -27 6 888 315 0 0 0 chrX 39759410 39759445 -126890851 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 888 461 313 37 63 chrX 39759445 39759463 -126890833 + B3A SINE B2 172 188 -10 6 888 355 301 76 6 chrX 39759608 39759765 -126890531 - MIR SINE MIR -11 251 84 6 888 372 94 0 0 chrX 39759837 39759890 -126890406 + (TA)n Simple_repeat Simple_repeat 2 54 0 6 888 710 197 16 0 chrX 39760346 39760473 -126889823 - B1_Mus2 SINE Alu 0 147 19 6 888 1026 247 103 25 chrX 39760546 39760828 -126889468 - MTEa LTR MaLR -73 306 3 6 888 394 301 42 51 chrX 39760958 39761185 -126889111 + MIRb SINE MIR 38 266 -2 6 888 281 247 36 36 chrX 39761513 39761597 -126888699 + Charlie7 DNA MER1_type 1 84 -2528 6 888 537 312 80 111 chrX 39761858 39762013 -126888283 + Charlie7 DNA MER1_type 1534 1692 -920 6 888 2321 96 16 3 chrX 39762013 39762336 -126887960 - ORR1A2 LTR MaLR 0 327 1 6 888 537 312 80 111 chrX 39762336 39762840 -126887456 + Charlie7 DNA MER1_type 1693 2173 -439 6 888 549 270 95 19 chrX 39762851 39763115 -126887181 - Lx9 LINE L1 -20 7624 7341 6 888 1002 205 130 0 chrX 39763281 39763588 -126886708 - L1_Rod LINE L1 -2299 3548 3202 6 888 2507 39 8 183 chrX 39763588 39764058 -126886238 + RLTR10 LTR ERVK 1 388 -2 6 888 15398 30 3 29 chrX 39764070 39766064 -126884232 + RLTR10-int LTR ERVK 41 1984 -3 6 888 2651 42 8 182 chrX 39766066 39766538 -126883758 + RLTR10 LTR ERVK 1 390 0 6 888 597 175 39 50 chrX 39766538 39766664 -126883632 - L1_Rod LINE L1 -2640 3207 3064 6 888 1253 118 21 0 chrX 39766664 39766850 -126883446 - B2_Mm2 SINE B2 -4 191 2 6 888 1221 259 36 52 chrX 39766850 39767445 -126882851 - L1_Rod LINE L1 -2777 3070 2508 6 888 4875 123 19 35 chrX 39767445 39768685 -126881611 + L1Md_F LINE L1 205 1427 -4456 6 888 1169 113 26 0 chrX 39768673 39768867 -126881429 - L1Md_F3 LINE L1 -458 5425 5227 6 888 15557 57 11 1 chrX 39768850 39771514 -126878782 - L1Md_F3 LINE L1 -12 6570 3840 6 888 3342 253 47 14 chrX 39771580 39773010 -126877286 - L1_Rod LINE L1 -3472 2375 900 6 888 252 368 73 39 chrX 39773586 39773764 -126876532 + L4 LINE RTE 1296 1479 -550 6 888 354 23 0 0 chrX 39774239 39774282 -126876014 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 888 944 254 126 4 chrX 39774378 39774647 -126875649 - MTD LTR MaLR -1 418 117 6 888 459 0 0 0 chrX 39774652 39774703 -126875593 + (TTTTA)n Simple_repeat Simple_repeat 5 55 0 6 888 807 186 0 0 chrX 39774715 39774844 -126875452 - B3 SINE B2 -86 130 2 6 888 366 270 79 21 chrX 39774844 39774964 -126875332 - MTD LTR MaLR -291 128 1 6 888 206 366 12 12 chrX 39775183 39775266 -126875030 + L2b LINE L2 3292 3374 -1 6 888 412 81 11 55 chrX 39776268 39776359 -126873937 + (TCTCCC)n Simple_repeat Simple_repeat 3 89 0 6 888 445 274 97 47 chrX 39776382 39776639 -126873657 + Lx8 LINE L1 7192 7461 -12 6 888 203 169 0 72 chrX 39776647 39776730 -126873566 + (TTA)n Simple_repeat Simple_repeat 3 79 0 6 888 181 314 19 38 chrX 39776930 39776983 -126873313 + L2b LINE L2 3344 3395 -31 6 888 219 180 30 76 chrX 39778137 39778203 -126872093 + L2a LINE L2 3304 3366 -60 6 888 183 376 36 18 chrX 39778265 39778376 -126871920 + L3 LINE CR1 840 952 -3537 6 888 212 0 36 0 chrX 39778429 39778457 -126871839 + (TTA)n Simple_repeat Simple_repeat 1 29 0 6 888 2355 84 26 6 chrX 39778457 39778805 -126871491 - L1_Mus4 LINE L1 -16 6620 6266 6 888 1881 216 85 25 chrX 39778892 39779363 -126870933 - Lx7 LINE L1 -16 7680 7182 6 888 507 45 0 0 chrX 39780625 39780691 -126869605 + (CA)n Simple_repeat Simple_repeat 2 67 0 6 888 519 290 61 12 chrX 39781289 39781453 -126868843 - MER20 DNA MER1_type -9 210 39 6 888 493 236 16 39 chrX 39781607 39781735 -126868561 - MTEb LTR MaLR 0 379 255 6 888 621 271 34 15 chrX 39781770 39781976 -126868320 - L1MA8 LINE L1 -301 5990 5781 6 888 264 30 0 0 chrX 39782202 39782235 -126868061 + (CAA)n Simple_repeat Simple_repeat 2 34 0 6 888 221 308 23 93 chrX 39782413 39782499 -126867797 + MIRb SINE MIR 161 240 -28 6 888 1648 150 23 74 chrX 39782612 39783043 -126867253 - RMER17C LTR ERVK -1 409 1 6 888 4317 176 20 8 chrX 39783396 39784137 -126866159 - Lx5 LINE L1 -11 7039 6290 6 888 545 281 47 107 chrX 39784547 39784929 -126865367 - ORR1E LTR MaLR 0 359 1 6 888 1088 142 179 0 chrX 39785872 39786090 -126864206 - Lx5 LINE L1 -3 7047 6791 6 888 2265 122 130 0 chrX 39786749 39787117 -126863179 - MTC LTR MaLR -1 420 5 6 888 435 19 0 0 chrX 39787130 39787182 -126863114 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 888 2708 174 61 14 chrX 39787410 39787880 -126862416 + MT2A LTR ERVL 2 494 -39 6 888 387 0 0 0 chrX 39787880 39787923 -126862373 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 888 2708 174 61 14 chrX 39787923 39787958 -126862338 + MT2A LTR ERVL 495 530 -3 6 888 180 293 103 0 chrX 39788034 39788092 -126862204 - L2b LINE L2 -18 3357 3294 6 888 423 308 74 9 chrX 39788624 39788864 -126861432 + L1M5 LINE L1 5296 5556 -608 6 888 229 254 0 31 chrX 39789475 39789540 -126860756 - MER63D DNA AcHobo -967 94 32 6 888 23 0 0 0 chrX 39789755 39789778 -126860518 + AT_rich Low_complexity Low_complexity 1 23 0 6 888 31 44 0 0 chrX 39790714 39790759 -126859537 + AT_rich Low_complexity Low_complexity 1 45 0 6 888 2112 132 84 13 chrX 39790787 39791179 -126859117 - Lx2 LINE L1 -865 6132 5713 6 888 4672 137 48 18 chrX 39791181 39791997 -126858299 + Lx2B LINE L1 6160 6999 -1 6 888 24 53 0 0 chrX 39792055 39792093 -126858203 + AT_rich Low_complexity Low_complexity 1 38 0 6 888 229 196 0 0 chrX 39792095 39792141 -126858155 + ORR1D1 LTR MaLR 329 374 0 6 888 1593 174 222 78 chrX 39792582 39793047 -126857249 + MT2A LTR ERVL 2 533 0 6 888 618 341 24 5 chrX 39793147 39793359 -126856937 - B4A SINE B4 -75 217 2 6 888 33 0 0 0 chrX 39793758 39793791 -126856505 + AT_rich Low_complexity Low_complexity 1 33 0 6 888 458 319 122 63 chrX 39793891 39794615 -126855681 - L1M4 LINE L1 -1552 4594 3829 6 888 1520 113 18 5 chrX 39795234 39795456 -126854840 + URR1B DNA MER1_type 1 225 0 6 888 181 373 55 21 chrX 39795719 39795864 -126854432 + L2 LINE L2 2367 2516 -903 6 888 3680 120 109 3 chrX 39796003 39796571 -126853725 + Lx4A LINE L1 6429 7056 -2 6 888 1008 141 0 28 chrX 39796587 39796769 -126853527 + L1VL2 LINE L1 176 352 -5983 6 888 5756 77 15 12 chrX 39796762 39797787 -126852509 + L1VL2 LINE L1 800 1826 -1789 6 888 310 315 0 0 chrX 39797931 39798020 -126852276 - PB1D10 SINE Alu -2 115 27 6 888 1167 68 0 0 chrX 39798030 39798176 -126852120 - B1_Mus2 SINE Alu 0 147 2 6 888 251 50 0 0 chrX 39798619 39798659 -126851637 - L1Md_T LINE L1 0 6582 6543 6 888 13547 46 1 1 chrX 39799026 39801331 -126848965 + L1Md_F2 LINE L1 4091 6394 -188 6 888 1001 189 161 2 chrX 39801331 39801568 -126848728 + IAPEY3_LTR LTR ERVK 1 305 -80 6 888 6526 38 1 5 chrX 39801569 39802408 -126847888 - L1Md_F3 LINE L1 -14 6570 5735 6 888 645 136 18 9 chrX 39802408 39802519 -126847777 + RLTR10B LTR ERVK 180 291 -1 6 888 1273 53 0 0 chrX 39802519 39802688 -126847608 + L1Md_F2 LINE L1 6412 6580 -2 6 888 306 217 72 0 chrX 39803004 39803073 -126847223 + L1M2 LINE L1 2745 2818 -3325 6 888 1034 50 14 0 chrX 39803217 39803358 -126846938 + L1Md_F2 LINE L1 6437 6579 -3 6 888 446 288 31 62 chrX 39803789 39803917 -126846379 - L1ME3 LINE L1 -183 5979 5848 6 888 662 12 0 24 chrX 39803917 39804001 -126846295 + (TTTC)n Simple_repeat Simple_repeat 3 84 0 6 888 599 37 0 0 chrX 39804003 39804084 -126846212 - L1_Mus2 LINE L1 0 6566 6486 6 888 446 288 31 62 chrX 39804084 39804208 -126846088 - L1ME3 LINE L1 -315 5847 5732 6 888 735 125 22 26 chrX 39804333 39804482 -126845814 + ORR1A1 LTR MaLR 1 132 -197 6 888 1443 92 58 0 chrX 39804478 39804685 -126845611 - ORR1A2 LTR MaLR -51 276 58 6 888 349 326 0 0 chrX 39804687 39804782 -126845514 + Cheshire DNA MER1_type 178 272 -2148 6 888 189 0 0 0 chrX 39805098 39805119 -126845177 + (TG)n Simple_repeat Simple_repeat 1 21 0 6 888 403 310 86 0 chrX 39805189 39805305 -126844991 - ID_B1 SINE B4 -43 181 56 6 888 229 340 68 29 chrX 39805493 39805699 -126844597 - L1ME3B LINE L1 -30 6210 5997 6 888 261 257 0 0 chrX 39805853 39805927 -126844369 - L1MC5 LINE L1 -582 7379 7306 6 888 477 338 68 32 chrX 39806699 39806950 -126843346 + LTR33C LTR ERVL 29 288 -341 6 888 536 264 73 11 chrX 39807202 39807384 -126842912 + LTR33C LTR ERVL 440 629 0 6 888 683 288 0 0 chrX 39808086 39808225 -126842071 - ID_B1 SINE B4 0 224 86 6 888 229 267 36 90 chrX 39808338 39808449 -126841847 - B4 SINE B4 0 292 188 6 888 2323 155 60 72 chrX 39808483 39808970 -126841326 + RMER12 LTR ERVK 4 484 -838 6 888 1166 247 61 37 chrX 39808966 39809294 -126841002 + RMER12 LTR ERVK 987 1322 0 6 888 422 287 41 118 chrX 39809294 39809441 -126840855 - B4A SINE B4 -158 134 1 6 888 501 237 41 93 chrX 39809530 39809702 -126840594 + RSINE1 SINE B4 3 165 0 6 888 28 61 0 0 chrX 39810082 39810131 -126840165 + AT_rich Low_complexity Low_complexity 1 49 0 6 888 565 185 33 0 chrX 39810308 39810400 -126839896 - ID_B1 SINE B4 -21 203 109 6 888 1866 233 29 37 chrX 39810435 39810921 -126839375 + Lx5 LINE L1 6560 7041 -9 6 888 1245 270 77 45 chrX 39811205 39811950 -126838346 - L1MB7 LINE L1 -23 6151 5385 6 888 259 178 110 11 chrX 39811946 39812037 -126838259 - L1M4c LINE L1 -2818 3564 3465 6 888 243 0 0 0 chrX 39812037 39812064 -126838232 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 888 420 20 0 0 chrX 39812064 39812112 -126838184 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 888 801 287 129 9 chrX 39812124 39812356 -126837940 - B4A SINE B4 -31 261 2 7 888 253 309 68 58 chrX 39812535 39812554 -126837742 - PB1D10 SINE Alu -8 109 6 7 888 289 293 83 24 chrX 39812554 39812638 -126837658 - ID_B1 SINE B4 -49 175 87 7 888 521 292 140 6 chrX 39812656 39813014 -126837282 - L1M4c LINE L1 -3119 3263 2858 6 888 2314 139 88 0 chrX 39813091 39813501 -126836795 - Lx LINE L1 -12 6642 6197 7 888 249 223 181 11 chrX 39813617 39813794 -126836502 - L1M4c LINE L1 -3911 2473 2267 6 888 2197 64 0 30 chrX 39813812 39814117 -126836179 - L1Md_F2 LINE L1 -2 6580 6285 7 888 4201 48 0 2 chrX 39814117 39814657 -126835639 + L1Md_F2 LINE L1 5670 6208 -374 7 888 285 340 132 0 chrX 39814690 39814796 -126835500 - B1F SINE Alu -8 141 22 7 888 303 258 16 0 chrX 39814847 39814909 -126835387 - ID4 SINE ID -4 79 17 7 888 26 30 0 0 chrX 39815383 39815416 -126834880 + AT_rich Low_complexity Low_complexity 1 33 0 7 888 690 325 49 7 chrX 39815480 39815905 -126834391 - L1M4c LINE L1 -4593 1791 1349 6 888 280 263 0 0 chrX 39815909 39815966 -126834330 - B1F SINE Alu -75 74 18 7 888 324 0 0 0 chrX 39816036 39816072 -126834224 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 888 207 0 0 0 chrX 39816082 39816105 -126834191 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 888 525 219 395 6 chrX 39816532 39816846 -126833450 - Lx9 LINE L1 -7 7637 7202 7 888 262 281 76 11 chrX 39816945 39817051 -126833245 + MTE2a LTR MaLR 263 378 -6 7 888 201 39 0 0 chrX 39817305 39817331 -126832965 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 7 888 1161 62 0 0 chrX 39817334 39817478 -126832818 - B1_Mus2 SINE Alu 0 147 4 7 888 23793 134 111 11 chrX 39817846 39819256 -126831040 + L1_Mur2 LINE L1 497 2049 -3828 7 888 513 47 0 0 chrX 39819256 39819320 -126830976 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 888 23793 110 50 16 chrX 39819320 39822608 -126827688 + L1_Mur2 LINE L1 2050 5469 -408 7 888 752 264 18 0 chrX 39823264 39823431 -126826865 - B3A SINE B2 -27 171 2 7 888 348 139 0 0 chrX 39824657 39824736 -126825560 + (CCA)n Simple_repeat Simple_repeat 1 79 0 7 888 778 261 85 10 chrX 39825088 39825382 -126824914 + Charlie4a DNA MER1_type 98 413 -95 7 888 4503 70 0 0 chrX 39825382 39825954 -126824342 + L1_Mus1 LINE L1 5996 6567 0 7 888 21 36 0 0 chrX 39826044 39826072 -126824224 + AT_rich Low_complexity Low_complexity 1 28 0 7 888 2486 269 29 10 chrX 39826436 39827123 -126823173 - Lx7 LINE L1 -741 6955 6256 7 888 752 309 19 22 chrX 39827180 39827494 -126822802 + Lx7 LINE L1 7038 7350 -346 7 888 2163 137 32 3 chrX 39827568 39827913 -126822383 - MTC LTR MaLR 0 421 67 7 888 271 29 0 0 chrX 39827947 39827981 -126822315 - U2 snRNA snRNA -152 36 3 7 888 4724 107 55 3 chrX 39827981 39828676 -126821620 - Lx2 LINE L1 -18 6979 6249 7 888 213 39 0 0 chrX 39829148 39829174 -126821122 + (TTA)n Simple_repeat Simple_repeat 1 26 0 7 888 354 312 138 100 chrX 39830169 39830228 -126820068 + B4A SINE B4 2 73 -219 7 888 243 0 0 0 chrX 39830228 39830255 -126820041 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 888 354 312 138 100 chrX 39830255 39830405 -126819891 + B4A SINE B4 74 219 -73 7 888 399 73 0 0 chrX 39830468 39830523 -126819773 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 888 229 263 0 0 chrX 39831040 39831097 -126819199 + GA-rich Low_complexity Low_complexity 4 60 0 7 888 239 209 69 69 chrX 39831456 39831528 -126818768 - MLT1D LTR MaLR -2 503 432 7 888 1606 204 58 6 chrX 39831884 39832010 -126818286 - ORR1D1 LTR MaLR -3 371 244 7 888 222 37 0 0 chrX 39832010 39832037 -126818259 + (CAGG)n Simple_repeat Simple_repeat 4 30 0 7 888 1606 204 58 6 chrX 39832037 39832236 -126818060 - ORR1D1 LTR MaLR -131 243 29 7 888 27 29 0 0 chrX 39832560 39832594 -126817702 + AT_rich Low_complexity Low_complexity 1 34 0 7 888 419 250 0 0 chrX 39832715 39832807 -126817489 - Lx7 LINE L1 -395 7301 7210 7 888 27 0 0 0 chrX 39832824 39832851 -126817445 + AT_rich Low_complexity Low_complexity 1 27 0 7 888 22 56 0 0 chrX 39832964 39833000 -126817296 + AT_rich Low_complexity Low_complexity 1 36 0 7 888 245 318 99 9 chrX 39833278 39833389 -126816907 + MIRc SINE MIR 81 201 -67 7 888 1838 305 79 46 chrX 39835081 39835750 -126814546 - Lx8 LINE L1 -183 7290 6598 7 888 414 287 36 41 chrX 39835750 39835946 -126814350 - B3A SINE B2 -2 196 2 7 888 1838 305 79 46 chrX 39835946 39836139 -126814157 - Lx8 LINE L1 -876 6597 6400 7 888 201 100 0 48 chrX 39836575 39836617 -126813679 + (CCAA)n Simple_repeat Simple_repeat 2 41 0 7 888 790 314 21 11 chrX 39836638 39836921 -126813375 + B4A SINE B4 1 286 -6 7 888 728 138 137 9 chrX 39837109 39837273 -126813023 + Lx2 LINE L1 6815 7006 -2 7 888 359 319 128 82 chrX 39837369 39837758 -126812538 + L1M4 LINE L1 14 420 -6122 7 888 235 309 127 0 chrX 39837813 39837923 -126812373 + L1M4 LINE L1 619 742 -5800 7 888 1176 231 134 18 chrX 39837938 39838273 -126812023 + ORR1D1 LTR MaLR 1 374 0 7 888 981 154 7 0 chrX 39838355 39838504 -126811792 - B1_Mur4 SINE Alu 0 150 1 7 888 663 300 44 15 chrX 39838688 39838962 -126811334 - L1M4 LINE L1 -1163 4983 4702 7 888 360 0 0 0 chrX 39839536 39839576 -126810720 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 888 681 209 0 0 chrX 39839706 39839854 -126810442 + (TCTA)n Simple_repeat Simple_repeat 1 148 0 7 888 630 291 0 0 chrX 39839891 39840039 -126810257 - RSINE1 SINE B4 -16 149 2 7 888 308 267 342 13 chrX 39840047 39840181 -126810115 - B4A SINE B4 -72 220 43 7 888 318 214 101 59 chrX 39840221 39840340 -126809956 - L1_Rod LINE L1 -4170 1677 1554 7 888 326 200 62 0 chrX 39840346 39840411 -126809885 - HAL1-3A_ME LINE L1 -809 2049 1981 7 888 564 264 18 77 chrX 39840411 39840579 -126809717 - RSINE1 SINE B4 0 165 8 7 888 27 0 0 0 chrX 39840965 39840992 -126809304 + AT_rich Low_complexity Low_complexity 1 27 0 7 888 813 329 86 21 chrX 39841097 39841482 -126808814 + MTE-int LTR MaLR 767 1176 -404 7 888 2981 192 30 41 chrX 39841510 39842215 -126808081 - RCHARR1 DNA MER1_type 0 974 278 7 888 285 125 0 0 chrX 39842285 39842341 -126807955 + (A)n Simple_repeat Simple_repeat 1 56 0 7 888 316 286 154 0 chrX 39842395 39842486 -126807810 - PB1D10 SINE Alu -2 115 11 7 888 259 262 0 16 chrX 39842435 39842497 -126807799 - ID_B1 SINE B4 -83 141 81 7 888 282 324 0 0 chrX 39844158 39844294 -126806002 + GA-rich Low_complexity Low_complexity 1 136 0 7 888 30 59 0 0 chrX 39844941 39844992 -126805304 + AT_rich Low_complexity Low_complexity 1 51 0 7 888 711 0 0 0 chrX 39845119 39845198 -126805098 + (GAA)n Simple_repeat Simple_repeat 1 79 0 7 888 810 0 0 0 chrX 39845633 39845723 -126804573 + (TTC)n Simple_repeat Simple_repeat 1 90 0 7 13 494 196 5 63 chrX 39845725 39845916 -126804380 - RMER17C LTR ERVK -139 271 92 7 889 353 299 68 84 chrX 39846533 39846723 -126803573 - MTC-int LTR MaLR -706 552 404 7 889 355 337 41 0 chrX 39847090 39847188 -126803108 + MIRb SINE MIR 23 124 -144 7 889 825 148 37 0 chrX 39847220 39847233 -126803063 + MTC LTR MaLR 1 14 -407 7 889 252 59 0 0 chrX 39847233 39847267 -126803029 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 889 825 148 37 0 chrX 39847267 39847388 -126802908 + MTC LTR MaLR 15 139 -282 7 889 386 214 99 22 chrX 39847400 39847491 -126802805 - RMER10A LTR ERVL -27 415 318 7 889 286 168 18 36 chrX 39847616 39847727 -126802569 + GA-rich Low_complexity Low_complexity 6 114 0 7 889 974 226 52 9 chrX 39848070 39848280 -126802016 + MTC LTR MaLR 137 355 -66 7 889 763 258 17 0 chrX 39848318 39848496 -126801800 - B3A SINE B2 -13 185 5 7 889 232 268 28 0 chrX 39848523 39848594 -126801702 + (TATG)n Simple_repeat Simple_repeat 4 76 0 7 889 610 327 86 61 chrX 39848603 39848883 -126801413 - B4A SINE B4 0 292 6 7 889 31 44 0 0 chrX 39849211 39849256 -126801040 + AT_rich Low_complexity Low_complexity 1 45 0 7 889 1883 129 57 25 chrX 39849287 39849605 -126800691 + ORR1A4 LTR MaLR 1 328 -1 7 889 306 0 0 0 chrX 39849658 39849692 -126800604 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 889 441 257 26 0 chrX 39849830 39849943 -126800353 - Lx7 LINE L1 -375 7321 7206 7 889 2004 216 111 9 chrX 39850031 39850249 -126800047 - Lx6 LINE L1 -169 7291 7058 7 889 330 26 0 0 chrX 39850249 39850288 -126800008 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 889 2004 216 111 9 chrX 39850288 39850521 -126799775 - Lx6 LINE L1 -403 7057 6794 7 889 929 140 6 0 chrX 39850681 39850859 -126799437 + (GA)n Simple_repeat Simple_repeat 2 180 0 7 889 261 321 130 19 chrX 39851476 39851584 -126798712 - PB1 SINE Alu -7 120 1 7 889 364 294 50 91 chrX 39851949 39852317 -126797979 - ORR1E LTR MaLR 0 370 34 7 889 195 396 45 0 chrX 39852328 39852439 -126797857 + L2b LINE L2 3238 3353 -22 7 889 423 0 0 0 chrX 39852580 39852627 -126797669 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 889 225 0 0 0 chrX 39853202 39853227 -126797069 + (CTTG)n Simple_repeat Simple_repeat 1 25 0 7 889 270 81 0 0 chrX 39853228 39853265 -126797031 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 7 889 355 292 31 20 chrX 39853267 39853365 -126796931 - MIR3 SINE MIR -12 196 98 7 889 411 21 0 0 chrX 39853455 39853503 -126796793 + (TC)n Simple_repeat Simple_repeat 2 49 0 7 889 251 136 61 20 chrX 39853521 39853619 -126796677 + (CAGA)n Simple_repeat Simple_repeat 1 102 0 7 889 296 285 185 0 chrX 39853669 39853799 -126796497 - L2a LINE L2 0 3426 3273 7 889 1208 230 86 6 chrX 39854662 39855021 -126795275 + Lx9 LINE L1 7257 7644 0 7 889 217 347 80 0 chrX 39855179 39855254 -126795042 + ID4_ SINE ID 2 82 -1 7 889 576 0 0 0 chrX 39855741 39855805 -126794491 + (TC)n Simple_repeat Simple_repeat 1 64 0 7 889 481 212 25 62 chrX 39856544 39856696 -126793600 + B1_Mur1 SINE Alu 1 146 -3 7 889 583 199 20 7 chrX 39857248 39857395 -126792901 + (CATATA)n Simple_repeat Simple_repeat 2 150 0 7 889 203 331 133 51 chrX 39857961 39858254 -126792042 + L2c LINE L2 3063 3379 -8 7 889 410 0 20 0 chrX 39858715 39858765 -126791531 + (TTTTG)n Simple_repeat Simple_repeat 1 51 0 7 889 468 62 0 0 chrX 39859878 39859942 -126790354 + (CA)n Simple_repeat Simple_repeat 1 64 0 8 889 300 363 85 37 chrX 39860101 39860347 -126789949 - L1M5 LINE L1 -1098 5048 4791 8 889 22 0 0 0 chrX 39860672 39860694 -126789602 + AT_rich Low_complexity Low_complexity 1 22 0 8 889 1319 315 77 28 chrX 39860866 39861513 -126788783 - Lx8 LINE L1 -930 6543 5865 8 889 554 93 105 0 chrX 39861527 39861613 -126788683 - B2_Mm2 SINE B2 -99 96 2 8 889 333 339 113 0 chrX 39861905 39862029 -126788267 + B1F2 SINE Alu 4 141 -8 8 889 22 56 0 0 chrX 39862559 39862595 -126787701 + AT_rich Low_complexity Low_complexity 1 36 0 8 889 572 261 32 26 chrX 39862622 39862811 -126787485 - L1MA8 LINE L1 -333 5958 5769 8 889 1546 224 77 22 chrX 39863017 39863625 -126786671 - L1MA8 LINE L1 -509 5782 5138 8 889 1079 62 7 0 chrX 39863636 39863781 -126786515 - B1_Mus2 SINE Alu -1 146 1 8 889 372 238 0 56 chrX 39864077 39864192 -126786104 + B3 SINE B2 23 125 -70 8 889 986 268 50 11 chrX 39864700 39864979 -126785317 - B4 SINE B4 -1 291 2 8 889 1002 218 24 0 chrX 39865829 39866040 -126784256 + B3 SINE B2 1 216 0 8 889 1698 263 50 58 chrX 39866068 39866725 -126783571 + L1MA6 LINE L1 5385 6036 -264 8 889 1917 186 67 24 chrX 39866728 39867128 -126783168 - MTD LTR MaLR -21 398 1 8 889 942 215 131 9 chrX 39867214 39867435 -126782861 + RMER1B Other Other 386 633 -433 8 889 933 254 10 5 chrX 39867504 39867710 -126782586 - B3 SINE B2 -9 207 1 8 889 360 278 112 6 chrX 39867711 39867881 -126782415 - L1MA5 LINE L1 -319 5981 5794 8 889 24 67 0 0 chrX 39867955 39868000 -126782296 + AT_rich Low_complexity Low_complexity 1 45 0 8 889 339 85 0 0 chrX 39868809 39868856 -126781440 + (CAA)n Simple_repeat Simple_repeat 2 48 0 8 889 264 333 26 17 chrX 39869090 39869206 -126781090 + MIRb SINE MIR 138 254 -14 8 889 22 35 0 0 chrX 39870061 39870090 -126780206 + AT_rich Low_complexity Low_complexity 1 29 0 8 889 274 311 0 0 chrX 39870117 39870178 -126780118 - ID4 SINE ID -17 66 6 8 889 1249 308 80 18 chrX 39870562 39871051 -126779245 - Lx8 LINE L1 -6 7467 6949 8 889 24 0 0 0 chrX 39874763 39874787 -126775509 + AT_rich Low_complexity Low_complexity 1 24 0 8 889 319 305 24 0 chrX 39875516 39875598 -126774698 + ID_B1 SINE B4 86 169 -55 8 889 298 345 64 0 chrX 39875598 39875622 -126774674 + PB1D10 SINE Alu 5 117 0 8 889 181 298 71 41 chrX 39876037 39876135 -126774161 - L2b LINE L2 -56 3319 3219 8 889 904 287 5 0 chrX 39876525 39876734 -126773562 - ID_B1 SINE B4 -14 210 1 8 889 275 199 12 105 chrX 39876941 39877036 -126773260 + B1_Mur2 SINE Alu 35 148 -1 8 889 324 245 52 164 chrX 39877395 39877451 -126772845 - RMER10A LTR ERVL -13 429 378 8 889 785 87 9 0 chrX 39877451 39877566 -126772730 + (TTCC)n Simple_repeat Simple_repeat 3 118 0 8 889 324 245 52 164 chrX 39877566 39877577 -126772719 - RMER10A LTR ERVL -65 377 377 8 889 1235 89 6 0 chrX 39877577 39877756 -126772540 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 8 889 324 245 52 164 chrX 39877756 39878034 -126772262 - RMER10A LTR ERVL -65 377 122 8 889 763 243 11 28 chrX 39878769 39878947 -126771349 - B4 SINE B4 -26 266 92 8 889 234 0 0 0 chrX 39878995 39879021 -126771275 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 8 889 259 312 74 0 chrX 39879196 39879277 -126771019 - B4 SINE B4 -125 99 13 8 889 257 265 64 64 chrX 39879452 39879561 -126770735 + MIR3 SINE MIR 9 117 -91 8 889 235 184 20 0 chrX 39880338 39880387 -126769909 + (TA)n Simple_repeat Simple_repeat 1 50 0 8 889 282 205 0 0 chrX 39881846 39881924 -126768372 + T-rich Low_complexity Low_complexity 1 78 0 8 889 318 26 0 0 chrX 39885557 39885596 -126764700 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 8 889 1231 288 82 24 chrX 39886729 39887195 -126763101 - Lx8 LINE L1 -23 7450 6958 8 889 180 176 0 0 chrX 39888108 39888142 -126762154 + T-rich Low_complexity Low_complexity 1 34 0 8 889 258 56 0 0 chrX 39890189 39890225 -126760071 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 889 448 366 131 43 chrX 39891330 39891658 -126758638 - L2b LINE L2 0 3375 3019 8 889 396 0 0 0 chrX 39891749 39891793 -126758503 + (GA)n Simple_repeat Simple_repeat 1 44 0 8 889 438 319 21 14 chrX 39891942 39892085 -126758211 + B1F1 SINE Alu 1 144 -5 8 889 901 89 0 0 chrX 39892126 39892250 -126758046 - B1_Mus1 SINE Alu -12 136 13 8 889 330 333 0 0 chrX 39892251 39892326 -126757970 + ID4_ SINE ID 9 83 0 8 889 333 0 0 0 chrX 39892346 39892383 -126757913 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 889 490 328 120 38 chrX 39892472 39892738 -126757558 - B4A SINE B4 0 292 5 8 889 22 35 0 0 chrX 39894193 39894222 -126756074 + AT_rich Low_complexity Low_complexity 1 29 0 8 889 243 0 0 0 chrX 39894522 39894549 -126755747 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 8 889 219 339 0 0 chrX 39895418 39895474 -126754822 - PB1D7 SINE Alu -57 63 8 8 889 212 0 36 0 chrX 39895492 39895520 -126754776 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 8 889 311 221 36 12 chrX 39899328 39899414 -126750882 - B3A SINE B2 -110 106 9 8 889 811 310 161 49 chrX 39899751 39900446 -126749850 - L1ME4a LINE L1 -46 6078 5306 8 889 372 174 0 0 chrX 39902102 39902194 -126748102 + (CA)n Simple_repeat Simple_repeat 2 93 0 8 889 188 339 25 51 chrX 39902742 39902860 -126747436 + MIRb SINE MIR 113 227 -41 8 889 187 232 0 111 chrX 39903284 39903347 -126746949 + L3 LINE CR1 884 939 -3550 8 889 3612 36 0 0 chrX 39903472 39903920 -126746376 - L1_Mus1 LINE L1 -506 6061 5614 8 889 4488 50 0 0 chrX 39903920 39904456 -126745840 + L1_Mus1 LINE L1 6032 6567 0 8 889 861 294 21 17 chrX 39904700 39904935 -126745361 + B4 SINE B4 43 278 -14 8 889 306 0 0 0 chrX 39904939 39904973 -126745323 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 889 824 114 0 8 chrX 39906082 39906214 -126744082 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 8 889 671 315 97 0 chrX 39906694 39906932 -126743364 + MIRc SINE MIR 6 266 -2 8 889 348 200 85 43 chrX 39907456 39907550 -126742746 + PB1D7 SINE Alu 19 116 -4 8 889 237 180 40 0 chrX 39909065 39909115 -126741181 + GA-rich Low_complexity Low_complexity 2 53 0 8 889 231 36 0 0 chrX 39909302 39909330 -126740966 + (TCTG)n Simple_repeat Simple_repeat 2 29 0 8 889 204 40 0 0 chrX 39911234 39911259 -126739037 + (T)n Simple_repeat Simple_repeat 1 25 0 8 889 192 77 0 0 chrX 39911619 39911645 -126738651 + (TTG)n Simple_repeat Simple_repeat 2 27 0 8 889 910 186 73 21 chrX 39913712 39913904 -126736392 - B3 SINE B2 -14 202 1 8 889 23 33 0 0 chrX 39913949 39913979 -126736317 + AT_rich Low_complexity Low_complexity 1 30 0 8 889 198 313 116 74 chrX 39914962 39915083 -126735213 + L2c LINE L2 3243 3368 -19 8 889 1507 215 121 0 chrX 39915205 39915577 -126734719 + MTD LTR MaLR 3 419 0 8 889 283 341 24 0 chrX 39915894 39915976 -126734320 - ID SINE ID -139 85 2 8 889 200 73 0 68 chrX 39916552 39916596 -126733700 + (T)n Simple_repeat Simple_repeat 1 41 0 8 889 207 267 150 32 chrX 39917774 39917868 -126732428 + MIR SINE MIR 43 146 -122 8 889 269 317 0 0 chrX 39918094 39918176 -126732120 + L2a LINE L2 1703 1784 -1635 8 889 544 171 12 11 chrX 39918177 39918271 -126732025 + B1F2 SINE Alu 52 140 -9 8 889 344 290 37 30 chrX 39918291 39918426 -126731870 + L2a LINE L2 1804 1939 -1480 8 889 1057 287 61 18 chrX 39918433 39918891 -126731405 - L1MB7 LINE L1 -17 6167 5690 8 889 227 321 24 12 chrX 39919043 39919125 -126731171 - ID4 SINE ID 0 83 1 8 889 748 233 62 77 chrX 39919220 39919429 -126730867 - B3 SINE B2 0 216 11 8 889 623 252 229 19 chrX 39919438 39919648 -126730648 + MLT1A1 LTR MaLR 73 326 -82 8 889 495 285 7 58 chrX 39919644 39919782 -126730514 + RSINE1 SINE B4 6 136 -29 8 889 180 229 183 14 chrX 39919864 39919935 -126730361 + L2a LINE L2 2120 2202 -1217 8 889 36283 30 1 0 chrX 39919960 39926804 -126723492 - L1Md_T LINE L1 0 6585 1 8 889 519 347 150 9 chrX 39926860 39927200 -126723096 + L2a LINE L2 2263 2650 -769 8 889 722 93 9 0 chrX 39927229 39927337 -126722959 + (TCTA)n Simple_repeat Simple_repeat 4 112 0 8 889 758 236 7 7 chrX 39927341 39927486 -126722810 - RSINE1 SINE B4 -19 146 2 8 889 211 307 33 58 chrX 39927498 39927619 -126722677 + L2a LINE L2 3247 3364 -62 8 889 758 299 10 5 chrX 39927627 39927825 -126722471 - RMER30 DNA MER1_type -2 200 2 8 889 261 355 34 46 chrX 39928104 39928274 -126722022 + MIR SINE MIR 85 262 -6 8 889 234 0 0 0 chrX 39928303 39928329 -126721967 + (A)n Simple_repeat Simple_repeat 1 26 0 8 889 593 234 22 112 chrX 39932014 39932192 -126718104 + MER5A DNA MER1_type 2 163 -26 8 889 669 319 148 14 chrX 39932829 39933173 -126717123 + MLT1B LTR MaLR 1 390 0 8 889 217 265 78 10 chrX 39933220 39933323 -126716973 - L2 LINE L2 -558 2861 2752 8 889 184 293 0 24 chrX 39933342 39933384 -126716912 - MIRm SINE MIR -40 236 196 8 889 279 0 0 0 chrX 39935228 39935259 -126715037 + (TTTC)n Simple_repeat Simple_repeat 1 31 0 8 889 273 272 162 29 chrX 39936843 39936982 -126713314 - MER20 DNA MER1_type -30 189 23 8 889 187 393 62 7 chrX 39936987 39937133 -126713163 - L2 LINE L2 -553 2866 2713 8 889 199 336 71 8 chrX 39937415 39937541 -126712755 + MIRb SINE MIR 127 260 -8 8 889 4613 59 8 12 chrX 39937984 39938587 -126711709 - L1Md_F2 LINE L1 -1 6581 5981 8 889 195 69 0 0 chrX 39939659 39939688 -126710608 + (CAAAT)n Simple_repeat Simple_repeat 2 30 0 8 889 1336 91 0 26 chrX 39939792 39939984 -126710312 - B2_Mm1a SINE B2 -4 189 3 8 889 269 335 144 12 chrX 39940131 39940291 -126710005 + MLT1J LTR MaLR 1 181 -331 8 889 22 35 0 0 chrX 39940734 39940763 -126709533 + AT_rich Low_complexity Low_complexity 1 29 0 9 889 713 285 86 9 chrX 39940808 39941251 -126709045 - L1MA6 LINE L1 -6 6291 5828 9 889 264 358 0 0 chrX 39941817 39941884 -126708412 + Charlie1 DNA MER1_type 14 80 -2701 9 889 225 0 0 0 chrX 39941932 39941957 -126708339 + (T)n Simple_repeat Simple_repeat 1 25 0 9 889 267 265 116 13 chrX 39942000 39942111 -126708185 + B1F1 SINE Alu 3 115 -2 9 889 3371 221 82 22 chrX 39942243 39943176 -126707120 + Lx9 LINE L1 6108 7095 -549 9 889 262 242 16 0 chrX 39943200 39943262 -126707034 + Charlie1 DNA MER1_type 2713 2775 -6 9 889 558 275 86 13 chrX 39945147 39945245 -126705051 + LTR50 LTR ERVL 1 103 -692 9 889 303 28 0 0 chrX 39945245 39945281 -126705015 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 9 889 558 275 86 13 chrX 39945281 39945414 -126704882 + LTR50 LTR ERVL 104 248 -547 9 889 1621 42 0 0 chrX 39945619 39945812 -126704484 - B2_Mm1t SINE B2 0 193 1 9 889 238 289 82 10 chrX 39945876 39945974 -126704322 + LTR33A_ LTR ERVL 425 529 -2 9 889 848 292 55 41 chrX 39946052 39946316 -126703980 + MTE2a LTR MaLR 3 270 -109 9 889 6992 141 131 40 chrX 39946316 39947007 -126703289 + RLTR21 LTR ERVK 1 688 -884 9 889 5746 30 1 0 chrX 39947007 39947679 -126702617 - L1Md_F2 LINE L1 0 6582 5910 9 889 6992 141 131 40 chrX 39947679 39948138 -126702158 + RLTR21 LTR ERVK 689 1287 -285 9 889 282 56 0 0 chrX 39948138 39948174 -126702122 + (TG)n Simple_repeat Simple_repeat 1 36 0 9 889 6992 141 131 40 chrX 39948174 39948460 -126701836 + RLTR21 LTR ERVK 1288 1569 -3 9 889 225 259 90 45 chrX 39948484 39948573 -126701723 + MTE2a LTR MaLR 261 353 -6 9 889 1113 76 7 0 chrX 39949447 39949592 -126700704 - B1_Mus2 SINE Alu -1 146 1 9 889 26 30 0 0 chrX 39949613 39949646 -126700650 + AT_rich Low_complexity Low_complexity 1 33 0 9 889 299 49 31 47 chrX 39950531 39950595 -126699701 + (CAAAA)n Simple_repeat Simple_repeat 2 64 0 9 889 315 0 0 0 chrX 39950856 39950891 -126699405 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 9 889 420 275 33 16 chrX 39951428 39951550 -126698746 - MIR SINE MIR -14 248 125 9 889 207 0 0 0 chrX 39951748 39951771 -126698525 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 9 889 204 216 19 19 chrX 39951991 39952043 -126698253 - MIRc SINE MIR -7 261 210 9 889 573 15 0 0 chrX 39953467 39953533 -126696763 + (GA)n Simple_repeat Simple_repeat 1 66 0 9 889 180 288 191 79 chrX 39953764 39954005 -126696291 + L3 LINE CR1 2682 2949 -1540 9 889 216 0 0 0 chrX 39954018 39954042 -126696254 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 889 574 284 65 6 chrX 39954997 39955167 -126695129 + B3A SINE B2 1 180 -18 9 889 396 0 0 0 chrX 39956199 39956243 -126694053 + (TC)n Simple_repeat Simple_repeat 1 44 0 9 889 441 36 0 0 chrX 39956243 39956298 -126693998 + (CA)n Simple_repeat Simple_repeat 1 55 0 9 889 180 0 0 0 chrX 39957567 39957587 -126692709 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 9 889 334 370 58 53 chrX 39957665 39958082 -126692214 + L2 LINE L2 2136 2554 -865 9 889 1569 213 27 32 chrX 39958266 39958640 -126691656 + ORR1D1 LTR MaLR 1 372 -2 9 889 685 202 59 0 chrX 39958692 39958811 -126691485 - B1_Mur2 SINE Alu -23 126 1 9 889 643 201 96 15 chrX 39959076 39959212 -126691084 - B1_Mur2 SINE Alu 0 149 3 9 889 279 0 0 0 chrX 39960184 39960215 -126690081 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 889 244 333 39 0 chrX 39960277 39960379 -126689917 + MLT1L LTR MaLR 505 610 0 9 889 27 0 0 0 chrX 39960681 39960708 -126689588 + AT_rich Low_complexity Low_complexity 1 27 0 9 889 658 296 0 0 chrX 39961080 39961215 -126689081 + RSINE1 SINE B4 3 137 -28 9 889 23 0 0 0 chrX 39961236 39961259 -126689037 + AT_rich Low_complexity Low_complexity 1 23 0 9 889 23 78 0 0 chrX 39961944 39961995 -126688301 + AT_rich Low_complexity Low_complexity 1 51 0 9 889 239 325 85 6 chrX 39962339 39962503 -126687793 - Lx8 LINE L1 -2 7471 7295 9 889 726 231 25 91 chrX 39962952 39963195 -126687101 - Tigger7 DNA MER2_type -45 2446 2220 9 889 631 325 24 19 chrX 39963246 39963453 -126686843 - B4 SINE B4 -2 290 83 9 889 404 202 60 17 chrX 39963466 39963582 -126686714 - Lx4B LINE L1 -6 7052 6932 9 889 409 227 13 0 chrX 39963631 39963706 -126686590 - B4 SINE B4 -212 80 5 9 889 445 332 153 38 chrX 39963717 39963783 -126686513 - MER44D DNA MER2_type -262 443 378 9 889 1088 51 0 14 chrX 39963783 39963922 -126686374 + B1_Mus2 SINE Alu 2 138 -9 9 889 183 42 0 0 chrX 39963922 39963946 -126686350 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 9 889 629 315 72 22 chrX 39963946 39964191 -126686105 - Tigger7 DNA MER2_type -328 377 94 9 889 297 0 0 0 chrX 39964387 39964420 -126685876 + (CA)n Simple_repeat Simple_repeat 2 34 0 9 889 924 244 126 73 chrX 39964447 39964791 -126685505 + ORR1E LTR MaLR 1 394 0 9 889 420 299 0 25 chrX 39964823 39964943 -126685353 + PB1D10 SINE Alu 1 117 0 9 889 229 220 20 20 chrX 39964944 39964995 -126685301 + B4A SINE B4 1 51 -241 9 889 615 269 89 59 chrX 39965404 39965641 -126684655 + B4A SINE B4 41 284 -8 9 889 241 109 109 0 chrX 39967190 39967245 -126683051 - Lx2 LINE L1 0 6997 6937 9 889 339 25 0 0 chrX 39968242 39968282 -126682014 + (CAA)n Simple_repeat Simple_repeat 2 41 0 9 889 251 360 62 41 chrX 39969946 39970091 -126680205 - L2b LINE L2 -3 3423 3247 9 889 483 63 0 0 chrX 39970097 39970160 -126680136 + (CATAC)n Simple_repeat Simple_repeat 2 64 0 9 889 636 14 0 0 chrX 39970243 39970316 -126679980 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 9 889 346 293 56 24 chrX 39970392 39970518 -126679778 - MIRb SINE MIR -13 255 126 9 889 373 301 80 36 chrX 39972678 39972816 -126677480 + RSINE1 SINE B4 3 146 -19 9 889 369 0 0 0 chrX 39972826 39972867 -126677429 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 889 237 333 18 26 chrX 39973187 39973301 -126676995 + MIRc SINE MIR 94 206 -62 9 889 317 349 68 8 chrX 39973740 39973873 -126676423 + ID_B1 SINE B4 83 223 -1 9 889 237 160 0 57 chrX 39976198 39976251 -126674045 + Lx8 LINE L1 7408 7457 -16 9 889 301 233 23 0 chrX 39976370 39976456 -126673840 + L1MB3 LINE L1 6074 6161 -22 9 111 402 21 0 0 chrX 39976954 39977001 -126673295 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 890 368 308 41 71 chrX 39977414 39977610 -126672686 + MER97c DNA MER1_type? 12 201 -889 9 890 987 204 64 29 chrX 39978935 39979205 -126671091 + MER2 DNA MER2_type 2 288 -57 9 890 284 294 56 56 chrX 39979721 39979865 -126670431 - MIRb SINE MIR -28 240 97 9 890 474 121 0 0 chrX 39980413 39980479 -126669817 - Lx LINE L1 -549 6105 6040 9 890 882 309 37 37 chrX 39980927 39981027 -126669269 - Lx7 LINE L1 -284 7412 7309 9 890 414 0 0 0 chrX 39981027 39981073 -126669223 + (CACCC)n Simple_repeat Simple_repeat 3 48 0 9 890 882 309 37 37 chrX 39981073 39981321 -126668975 - Lx7 LINE L1 -388 7308 7064 9 890 1935 63 4 4 chrX 39981518 39981774 -126668522 + L1_Mus1 LINE L1 6312 6567 0 9 890 347 360 32 108 chrX 39983666 39983915 -126666381 + MIRb SINE MIR 36 265 -3 9 890 7774 60 4 5 chrX 39984194 39985474 -126664822 + L1_Mus2 LINE L1 5288 6565 -1 9 890 1192 137 106 14 chrX 39985744 39985951 -126664345 - URR1A DNA MER1_type 0 226 1 9 890 35431 35 0 0 chrX 39986130 39991311 -126658985 + L1Md_T LINE L1 312 5589 -297 9 890 8946 6 0 1 chrX 39991311 39992308 -126657988 + L1Md_T LINE L1 5590 6585 0 9 890 6229 7 31 0 chrX 39992494 39993200 -126657096 + L1Md_T LINE L1 5855 6582 0 9 890 240 229 71 0 chrX 39995034 39995104 -126655192 + CR1_Mam LINE CR1 2044 2118 -86 9 890 24 32 0 0 chrX 39995720 39995751 -126654545 + AT_rich Low_complexity Low_complexity 1 31 0 9 890 877 210 40 35 chrX 39996526 39996728 -126653568 - MTD LTR MaLR -14 405 203 9 890 711 0 0 0 chrX 39996728 39996807 -126653489 + (TTTC)n Simple_repeat Simple_repeat 3 81 0 9 890 761 260 35 48 chrX 39996807 39996837 -126653459 - MTD LTR MaLR -219 202 181 9 890 509 150 12 0 chrX 39996837 39996887 -126653409 - B2_Mm1t SINE B2 -112 81 1 9 890 547 199 43 71 chrX 39997070 39997211 -126653085 - MTD LTR MaLR -209 210 74 9 890 989 291 109 83 chrX 39998076 39998127 -126652169 - L1MC3 LINE L1 -164 7621 7575 9 890 182 37 0 36 chrX 39998127 39998155 -126652141 + (TTA)n Simple_repeat Simple_repeat 1 27 0 9 890 989 291 109 83 chrX 39998155 39998994 -126651302 - L1MC3 LINE L1 -211 7574 6705 9 890 198 71 0 0 chrX 39998994 39999022 -126651274 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 9 890 1039 64 7 21 chrX 39999024 39999168 -126651128 - B1_Mm SINE Alu -5 142 1 9 890 180 0 0 0 chrX 40001089 40001109 -126649187 + (A)n Simple_repeat Simple_repeat 1 20 0 1 890 182 394 18 59 chrX 40001849 40002019 -126648277 + MER5A DNA MER1_type 21 183 -6 2 890 211 283 0 19 chrX 40002011 40002065 -126648231 + MER5A DNA MER1_type 137 189 0 2 890 1750 283 34 13 chrX 40002300 40002833 -126647463 + Lx8 LINE L1 6553 7096 -377 3 890 795 276 42 23 chrX 40002831 40003094 -126647202 + Lx8 LINE L1 7206 7473 0 3 890 508 270 109 57 chrX 40004521 40004804 -126645492 - L1MB7 LINE L1 -18 6166 5869 4 890 375 23 0 0 chrX 40004835 40004879 -126645417 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 890 219 186 0 23 chrX 40006095 40006139 -126644157 + CT-rich Low_complexity Low_complexity 1 43 0 6 890 210 118 0 0 chrX 40006330 40006364 -126643932 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 890 1462 227 17 7 chrX 40007496 40007797 -126642499 + Lx6 LINE L1 7146 7449 -11 8 890 250 307 33 22 chrX 40008104 40008194 -126642102 + Charlie4z DNA MER1_type 71 161 -6 9 890 340 220 11 131 chrX 40010227 40010410 -126639886 - Lx9 LINE L1 -7 7637 7477 1 890 236 261 33 0 chrX 40010391 40010483 -126639813 - Lx9 LINE L1 -127 7517 7423 1 890 2609 96 8 3 chrX 40011599 40011976 -126638320 - L1_Mus3 LINE L1 -12 6626 6248 1 890 291 337 35 60 chrX 40012629 40012828 -126637468 + L2c LINE L2 3149 3342 -45 1 890 358 307 21 0 chrX 40015901 40016041 -126634255 + L1ME1 LINE L1 6024 6166 -13 1 890 369 0 0 0 chrX 40018483 40018524 -126631772 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 890 921 90 0 0 chrX 40018626 40018759 -126631537 + (TTTC)n Simple_repeat Simple_repeat 2 134 0 1 890 1118 57 0 7 chrX 40018759 40018895 -126631401 - B1_Mus1 SINE Alu -8 140 5 1 890 299 331 16 55 chrX 40018983 40019111 -126631185 + MER45A DNA Tip100 56 178 0 1 890 297 286 0 13 chrX 40019191 40019269 -126631027 - B4A SINE B4 0 292 216 1 890 465 353 26 0 chrX 40019334 40019490 -126630806 - RSINE1 SINE B4 -4 161 2 1 890 924 256 22 18 chrX 40019490 40019711 -126630585 - B4A SINE B4 -65 227 6 1 890 250 111 0 0 chrX 40020046 40020082 -126630214 + U2 snRNA snRNA 1 36 -152 2 890 854 167 189 27 chrX 40022124 40022309 -126627987 + B3 SINE B2 1 215 -1 2 890 246 349 28 90 chrX 40022914 40023018 -126627278 - L1M5 LINE L1 -2174 3972 3880 2 890 3039 123 94 0 chrX 40023018 40023499 -126626797 - Lx4A LINE L1 0 7058 6533 2 890 246 349 28 90 chrX 40023499 40023605 -126626691 - L1M5 LINE L1 -2267 3879 3775 2 890 467 258 18 85 chrX 40023978 40024143 -126626153 - L2a LINE L2 -1 3425 3272 2 890 239 289 30 109 chrX 40024294 40024395 -126625901 - Tigger7 DNA MER2_type -8 2483 2391 2 890 378 212 0 34 chrX 40024388 40024476 -126625820 - Tigger7 DNA MER2_type -1448 1043 959 2 890 1134 272 20 133 chrX 40024473 40024673 -126625623 - Tigger7 DNA MER2_type -2144 347 170 2 890 416 273 18 83 chrX 40024673 40024841 -126625455 - RSINE1 SINE B4 -5 160 4 2 890 1134 272 20 133 chrX 40024841 40025030 -126625266 - Tigger7 DNA MER2_type -2322 169 2 2 890 268 296 0 0 chrX 40025065 40025136 -126625160 - Tigger5 DNA MER2_type -45 2361 2291 2 890 460 331 78 0 chrX 40025183 40025325 -126624971 - Tigger5 DNA MER2_type -2250 156 4 2 890 523 294 142 52 chrX 40026132 40026441 -126623855 - ORSL-2a DNA Tip100 -5 337 1 2 890 508 258 8 30 chrX 40026632 40026764 -126623532 + MIRc SINE MIR 113 241 -27 2 890 183 42 0 0 chrX 40027709 40027733 -126622563 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 890 757 319 48 78 chrX 40028184 40028646 -126621650 - MLT1D LTR MaLR -4 501 54 3 890 9337 47 1 17 chrX 40028986 40030889 -126619407 - L1Md_F2 LINE L1 -12 6570 4705 3 890 512 241 92 88 chrX 40030920 40031225 -126619071 + Lx9 LINE L1 7338 7643 -1 3 890 202 132 38 0 chrX 40031288 40031341 -126618955 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 890 246 95 0 0 chrX 40031774 40031816 -126618480 + (A)n Simple_repeat Simple_repeat 1 42 0 3 890 355 304 22 0 chrX 40032199 40032291 -126618005 + B4 SINE B4 1 94 -198 3 890 2023 108 45 13 chrX 40032298 40032607 -126617689 - ORR1A2 LTR MaLR -8 319 1 3 890 559 315 7 34 chrX 40032614 40032762 -126617534 + B4A SINE B4 145 288 -4 3 890 1134 296 51 48 chrX 40032800 40033008 -126617288 + L1MB5 LINE L1 5557 5772 -402 3 890 408 55 0 0 chrX 40033008 40033063 -126617233 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 890 2565 51 6 6 chrX 40033063 40033399 -126616897 + L1Md_F2 LINE L1 6246 6581 -1 4 890 1134 296 51 48 chrX 40033399 40033736 -126616560 + L1MB5 LINE L1 5773 6104 -70 3 890 2559 251 188 23 chrX 40033757 40034800 -126615496 - RMER1A Other Other -1 1029 1 4 890 372 217 29 0 chrX 40035079 40035148 -126615148 - tRNA-Lys-AAG tRNA tRNA -5 71 1 4 890 323 85 0 0 chrX 40035165 40035212 -126615084 + L1MB7 LINE L1 6138 6184 0 4 890 1157 63 0 0 chrX 40035409 40035551 -126614745 + B1_Mus1 SINE Alu 1 142 -6 4 890 220 0 0 79 chrX 40035555 40035593 -126614703 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 4 890 252 77 0 0 chrX 40037291 40037330 -126612966 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 890 689 296 17 0 chrX 40038459 40038635 -126611661 - B3A SINE B2 -18 180 2 4 890 239 73 73 0 chrX 40038843 40038898 -126611398 + (TA)n Simple_repeat Simple_repeat 2 60 0 4 890 11727 15 0 0 chrX 40039204 40041244 -126609052 - L1Md_A LINE L1 0 6582 4543 4 890 1494 99 4 25 chrX 40041410 40041648 -126608648 + L1Md_F2 LINE L1 6348 6580 -2 5 890 300 211 0 0 chrX 40042343 40042414 -126607882 + GA-rich Low_complexity Low_complexity 3 73 0 5 890 21 36 0 0 chrX 40042441 40042469 -126607827 + AT_rich Low_complexity Low_complexity 1 28 0 5 890 213 114 68 0 chrX 40042743 40042827 -126607469 + (TCTA)n Simple_repeat Simple_repeat 1 89 0 5 890 234 0 0 0 chrX 40043909 40043935 -126606361 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 5 890 840 328 32 29 chrX 40044365 40044707 -126605589 + MLT2C1 LTR ERVL 1 343 -54 5 890 339 25 0 0 chrX 40044721 40044761 -126605535 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 890 284 148 0 16 chrX 40044882 40044944 -126605352 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 890 275 305 146 21 chrX 40044944 40045088 -126605208 - RMER12 LTR ERVK -466 856 695 5 890 265 274 151 45 chrX 40045643 40045836 -126604460 + MIR SINE MIR 38 255 -7 5 890 22 35 0 0 chrX 40046511 40046540 -126603756 + AT_rich Low_complexity Low_complexity 1 29 0 6 890 335 282 114 18 chrX 40046901 40047067 -126603229 - MamRep434 DNA TcMar -212 214 33 6 890 334 237 13 0 chrX 40047520 40047596 -126602700 - ID4 SINE ID -2 81 5 6 890 521 350 106 37 chrX 40048793 40049066 -126601230 - B4A SINE B4 0 292 1 6 890 701 105 19 0 chrX 40050213 40050318 -126599978 + B2_Mm2 SINE B2 1 107 -88 6 890 428 365 12 17 chrX 40050389 40050562 -126599734 - B3 SINE B2 -17 199 28 6 890 510 277 22 14 chrX 40052293 40052432 -126597864 + B1F1 SINE Alu 2 141 -8 6 890 240 262 66 0 chrX 40052464 40052525 -126597771 + ID4 SINE ID 18 82 -1 6 890 186 158 0 0 chrX 40052726 40052740 -126597556 + (TG)n Simple_repeat Simple_repeat 1 14 0 6 890 216 0 0 0 chrX 40052740 40052764 -126597532 + (TTG)n Simple_repeat Simple_repeat 3 26 0 6 890 186 158 0 0 chrX 40052764 40052787 -126597509 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 890 645 273 0 57 chrX 40054096 40054290 -126596006 - MER5A DNA MER1_type 0 189 7 7 890 330 218 13 13 chrX 40056418 40056497 -126593799 + PB1D9 SINE Alu 2 80 -40 7 890 25 0 0 0 chrX 40056773 40056798 -126593498 + AT_rich Low_complexity Low_complexity 1 25 0 7 890 986 217 89 28 chrX 40056807 40057054 -126593242 + Lx6 LINE L1 7173 7434 -26 7 890 4214 96 0 5 chrX 40057186 40057772 -126592524 - L1_Mus4 LINE L1 -4 6632 6050 7 890 207 0 0 0 chrX 40058157 40058180 -126592116 + (T)n Simple_repeat Simple_repeat 1 23 0 7 890 380 280 46 18 chrX 40058757 40058866 -126591430 - Tigger12c DNA MER2_type -609 125 14 7 890 261 329 13 0 chrX 40059365 40059441 -126590855 + L2a LINE L2 3117 3193 -233 7 890 25 31 0 0 chrX 40060177 40060209 -126590087 + AT_rich Low_complexity Low_complexity 1 32 0 7 890 301 312 0 0 chrX 40060214 40060294 -126590002 - ID4_ SINE ID -2 81 2 8 890 302 218 35 0 chrX 40060302 40060389 -126589907 - L1MA5 LINE L1 -2 6298 6209 8 890 238 370 0 27 chrX 40060399 40060510 -126589786 + L2a LINE L2 3280 3387 0 7 890 287 18 71 18 chrX 40060533 40060589 -126589707 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 8 890 1175 61 0 0 chrX 40060595 40060743 -126589553 - B1_Mus1 SINE Alu 0 148 1 8 890 304 313 12 0 chrX 40061778 40061861 -126588435 + ID_B1 SINE B4 84 167 -57 8 890 29 0 0 0 chrX 40062202 40062231 -126588065 + AT_rich Low_complexity Low_complexity 1 29 0 8 890 555 132 0 0 chrX 40062244 40062335 -126587961 + (TCTCCC)n Simple_repeat Simple_repeat 6 96 0 8 890 7017 33 0 0 chrX 40062603 40063426 -126586870 + L1Md_T LINE L1 5760 6582 0 8 890 273 140 0 0 chrX 40063445 40063502 -126586794 + (A)n Simple_repeat Simple_repeat 1 57 0 8 890 25 90 0 0 chrX 40063747 40063814 -126586482 + AT_rich Low_complexity Low_complexity 1 67 0 8 890 339 285 152 58 chrX 40063893 40064169 -126586127 - MER102a DNA MER1_type -1 329 28 9 890 242 55 0 98 chrX 40064961 40065022 -126585274 + A-rich Low_complexity Low_complexity 1 55 0 9 890 269 270 90 116 chrX 40065199 40065288 -126585008 + MIRb SINE MIR 54 150 -118 9 890 1171 68 0 0 chrX 40065288 40065436 -126584860 - B1_Mus1 SINE Alu 0 148 1 9 890 269 270 90 116 chrX 40065436 40065501 -126584795 + MIRb SINE MIR 151 204 -64 9 890 372 352 37 25 chrX 40065833 40065996 -126584300 + MIRc SINE MIR 103 267 -1 9 890 21 57 0 0 chrX 40066861 40066896 -126583400 + AT_rich Low_complexity Low_complexity 1 35 0 9 890 519 82 0 0 chrX 40067172 40067245 -126583051 + (TA)n Simple_repeat Simple_repeat 2 74 0 9 890 231 36 0 0 chrX 40067246 40067274 -126583022 + (TG)n Simple_repeat Simple_repeat 1 28 0 9 890 859 256 40 6 chrX 40067274 40067451 -126582845 - B3 SINE B2 -32 184 2 9 890 3725 68 21 14 chrX 40069389 40069908 -126580388 + L1_Mus3 LINE L1 6116 6638 0 9 890 236 262 82 0 chrX 40070910 40070971 -126579325 + Kanga1d DNA Tc2 114 179 -430 1 890 700 132 0 35 chrX 40072212 40072353 -126577943 - Lx2B LINE L1 -9 6991 6856 1 890 348 24 0 0 chrX 40072477 40072518 -126577778 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 890 214 316 33 50 chrX 40073657 40073777 -126576519 + L2a LINE L2 3225 3342 -84 1 890 318 298 81 16 chrX 40073903 40074026 -126576270 + MER3 DNA MER1_type 3 133 -76 1 890 277 311 0 0 chrX 40074444 40074518 -126575778 - B4A SINE B4 0 292 219 1 890 480 321 6 77 chrX 40074584 40074753 -126575543 - RSINE1 SINE B4 -2 163 7 1 890 1620 5 0 0 chrX 40074824 40075034 -126575262 + (TCTCCC)n Simple_repeat Simple_repeat 1 210 0 1 890 674 292 22 87 chrX 40075039 40075268 -126575028 - B4A SINE B4 -78 214 1 1 890 321 140 0 0 chrX 40077594 40077651 -126572645 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 890 180 247 112 45 chrX 40078307 40078396 -126571900 + MIR SINE MIR 155 249 -13 1 890 468 0 0 0 chrX 40078953 40079005 -126571291 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 890 219 203 0 0 chrX 40079621 40079680 -126570616 + (TAA)n Simple_repeat Simple_repeat 2 60 0 1 890 1032 266 25 99 chrX 40081548 40081953 -126568343 + MTE2a LTR MaLR 5 379 0 1 890 361 317 47 53 chrX 40082144 40082294 -126568002 + MamSINE1 SINE tRNA 138 286 -4 1 890 841 337 21 17 chrX 40084041 40084328 -126565968 - B4A SINE B4 -2 290 3 1 890 21 57 0 0 chrX 40085766 40085801 -126564495 + AT_rich Low_complexity Low_complexity 1 35 0 1 890 21 0 0 0 chrX 40085811 40085832 -126564464 + AT_rich Low_complexity Low_complexity 1 21 0 1 890 1252 253 47 40 chrX 40086107 40086510 -126563786 + Lx7 LINE L1 6975 7380 -316 1 890 241 140 17 17 chrX 40086510 40086568 -126563728 + GA-rich Low_complexity Low_complexity 2 59 0 1 890 4934 71 84 15 chrX 40086790 40088046 -126562250 + L1_Mus2 LINE L1 5198 6545 -21 1 890 3537 82 81 20 chrX 40088046 40088591 -126561705 + L1Md_F2 LINE L1 6005 6582 0 1 890 509 312 114 35 chrX 40088739 40089108 -126561188 + L1ME3B LINE L1 3401 3798 -2348 1 890 409 266 26 3 chrX 40089121 40089251 -126561045 + L1ME3B LINE L1 4411 4540 -1606 1 890 456 331 68 34 chrX 40089961 40090438 -126559858 + L1ME3B LINE L1 5457 5945 -217 1 890 356 282 33 25 chrX 40090500 40090620 -126559676 + GA-rich Low_complexity Low_complexity 5 125 0 1 890 356 243 153 26 chrX 40090754 40090944 -126559352 + L1MEe LINE L1 1957 2170 -3996 1 890 297 331 93 23 chrX 40091043 40091300 -126558996 + L1MEe LINE L1 2257 2531 -3615 1 890 287 194 0 88 chrX 40091639 40091707 -126558589 + RMER15-int LTR ERVL 4351 4412 -587 1 890 1863 316 67 25 chrX 40091716 40092601 -126557695 + Lx8 LINE L1 6546 7467 -6 1 890 21 36 0 0 chrX 40092703 40092731 -126557565 + AT_rich Low_complexity Low_complexity 1 28 0 1 890 22 35 0 0 chrX 40092745 40092774 -126557522 + AT_rich Low_complexity Low_complexity 1 29 0 1 890 2596 270 70 98 chrX 40093259 40094449 -126555847 + Lx7 LINE L1 5013 6172 -1524 1 890 387 0 0 0 chrX 40094449 40094492 -126555804 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 890 486 0 0 0 chrX 40094492 40094545 -126555751 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 890 2596 306 118 31 chrX 40094545 40095240 -126555056 + Lx7 LINE L1 6173 6929 -767 1 890 243 0 0 0 chrX 40095240 40095267 -126555029 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 890 2596 306 118 31 chrX 40095267 40095530 -126554766 + Lx7 LINE L1 6930 7230 -466 1 890 235 321 28 0 chrX 40096122 40096231 -126554065 + L1MEe LINE L1 3927 4038 -2108 1 890 475 374 0 62 chrX 40096634 40096842 -126553454 + ID_B1 SINE B4 20 214 -10 1 890 32 0 0 0 chrX 40097396 40097428 -126552868 + AT_rich Low_complexity Low_complexity 1 32 0 1 890 21 36 0 0 chrX 40098687 40098715 -126551581 + AT_rich Low_complexity Low_complexity 1 28 0 1 890 28 29 0 0 chrX 40099358 40099393 -126550903 + AT_rich Low_complexity Low_complexity 1 35 0 1 890 246 200 14 122 chrX 40099400 40099474 -126550822 + MT2B LTR ERVL 191 256 -345 1 890 610 207 9 18 chrX 40099409 40099522 -126550774 + B1_Mur1 SINE Alu 38 149 0 1 890 4484 73 21 3 chrX 40099536 40100142 -126550154 + L1Md_F2 LINE L1 5954 6570 -12 1 890 22 56 0 0 chrX 40100423 40100459 -126549837 + AT_rich Low_complexity Low_complexity 1 36 0 1 890 237 320 13 51 chrX 40101298 40101377 -126548919 - PB1D10 SINE Alu -15 102 27 1 890 9840 71 61 8 chrX 40101909 40103652 -126546644 + Lx3_Mus LINE L1 5161 7001 -8 1 890 362 187 64 27 chrX 40103666 40103776 -126546520 - Lx9 LINE L1 -13 7631 7518 1 890 290 26 26 0 chrX 40103778 40103817 -126546479 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 890 349 179 0 0 chrX 40103817 40103884 -126546412 - Lx9 LINE L1 -171 7473 7407 1 890 1132 275 25 80 chrX 40103997 40104396 -126545900 + MTE2a LTR MaLR 1 377 -2 1 890 315 0 0 0 chrX 40105055 40105090 -126545206 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 890 1166 203 259 130 chrX 40105218 40105727 -126544569 - RMER15 LTR ERVL 0 575 1 1 890 266 48 71 0 chrX 40106224 40106266 -126544030 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 1 890 228 35 0 0 chrX 40106535 40106564 -126543732 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 890 524 333 47 47 chrX 40106841 40107137 -126543159 + L1M3e LINE L1 47 342 -6688 1 890 1382 242 91 7 chrX 40107178 40107618 -126542678 + L1MA4A LINE L1 5306 5782 -518 1 890 450 305 44 31 chrX 40107618 40107777 -126542519 + RSINE1 SINE B4 3 163 -2 1 890 275 287 75 24 chrX 40107833 40108005 -126542291 + L1MA4A LINE L1 5821 6006 -306 1 891 446 281 82 23 chrX 40108338 40108701 -126541595 + L1MA9 LINE L1 5791 6189 -102 1 891 479 197 17 17 chrX 40109158 40109277 -126541019 - Lx7 LINE L1 -1 7695 7577 1 891 288 98 57 29 chrX 40109282 40109387 -126540909 + (TA)n Simple_repeat Simple_repeat 1 108 0 1 891 237 270 184 30 chrX 40109726 40109894 -126540402 + L1MA9 LINE L1 6111 6304 -8 1 891 777 22 0 0 chrX 40110886 40110977 -126539319 + (CA)n Simple_repeat Simple_repeat 1 91 0 1 891 487 321 123 55 chrX 40111485 40112012 -126538284 - L2 LINE L2 -925 2494 1932 1 891 431 340 37 65 chrX 40112015 40112370 -126537926 + L1MC4a LINE L1 6483 6827 -1055 1 891 3365 142 23 3 chrX 40112409 40112974 -126537322 - Lx2 LINE L1 0 6997 6422 1 891 333 0 0 0 chrX 40112995 40113032 -126537264 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 1 891 773 260 111 19 chrX 40113046 40113316 -126536980 - Lx2B LINE L1 -42 6958 6664 1 891 5111 51 3 2 chrX 40113318 40113963 -126536333 - L1Md_F2 LINE L1 0 6585 5940 1 891 591 124 0 0 chrX 40113966 40114055 -126536241 - L1_Mm LINE L1 -494 5389 5301 1 891 2139 39 4 0 chrX 40114057 40114317 -126535979 - L1Md_F2 LINE L1 -652 5935 5675 1 891 35314 36 0 0 chrX 40114318 40119761 -126530535 + L1Md_F2 LINE L1 50 5589 -297 1 891 8944 8 0 0 chrX 40119761 40120757 -126529539 + L1Md_T LINE L1 5590 6585 0 1 891 21 0 0 0 chrX 40120761 40120782 -126529514 + AT_rich Low_complexity Low_complexity 1 21 0 1 891 33221 82 11 6 chrX 40120782 40126017 -126524279 - L1Md_F2 LINE L1 -200 5686 449 1 891 265 91 23 0 chrX 40126013 40126057 -126524239 - Lx3B LINE L1 -278 6695 6651 1 891 378 276 104 0 chrX 40126058 40126250 -126524046 + L1MC4a LINE L1 6878 7089 -953 1 891 392 352 78 31 chrX 40126234 40126812 -126523484 + L1MC4a LINE L1 7227 7831 -211 1 891 25 51 0 0 chrX 40126839 40126878 -126523418 + AT_rich Low_complexity Low_complexity 1 39 0 1 891 237 260 146 0 chrX 40128816 40128912 -126521384 + MLT1C LTR MaLR 28 137 -368 1 891 290 313 30 10 chrX 40129071 40129171 -126521125 + MLT1C LTR MaLR 357 458 -9 1 891 182 357 97 7 chrX 40129359 40129503 -126520793 - MIR SINE MIR -75 187 31 1 891 240 355 75 0 chrX 40131746 40131839 -126518457 + MER5A DNA MER1_type 65 164 -25 1 891 219 327 68 44 chrX 40132214 40132383 -126517913 + MIRb SINE MIR 19 198 -70 1 891 722 251 61 25 chrX 40132406 40132602 -126517694 + B3 SINE B2 11 213 -3 1 891 1183 265 4 4 chrX 40132709 40132970 -126517326 - Lx9 LINE L1 -334 7310 7050 1 891 942 131 141 0 chrX 40132972 40133171 -126517125 + Lx9 LINE L1 7418 7644 0 1 891 555 328 87 101 chrX 40133565 40133803 -126516493 - L2 LINE L2 -375 3044 2805 1 891 2697 50 5 22 chrX 40133803 40134174 -126516122 - L1Md_F2 LINE L1 0 6582 6218 1 891 555 328 87 101 chrX 40134174 40134498 -126515798 - L2 LINE L2 -615 2804 2491 1 891 238 255 0 21 chrX 40136904 40136952 -126513344 + RSINE1 SINE B4 88 134 -31 1 891 564 15 0 0 chrX 40136974 40137039 -126513257 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 891 3591 70 17 2 chrX 40137283 40137758 -126512538 + L1_Mus1 LINE L1 6086 6567 0 1 891 207 0 0 0 chrX 40137919 40137942 -126512354 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 891 183 328 15 0 chrX 40140966 40141033 -126509263 + MIRb SINE MIR 94 161 -107 1 891 1751 166 39 47 chrX 40141228 40141588 -126508708 - ORR1B2 LTR MaLR -8 359 3 1 891 253 355 0 43 chrX 40141588 40141681 -126508615 + RSINE1 SINE B4 31 119 -46 1 891 441 54 0 0 chrX 40141718 40141774 -126508522 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 891 297 0 0 0 chrX 40141774 40141806 -126508490 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 891 206 211 0 0 chrX 40141806 40141844 -126508452 + (ATG)n Simple_repeat Simple_repeat 2 39 0 1 891 474 289 8 8 chrX 40141855 40141977 -126508319 - B3 SINE B2 0 216 95 1 891 527 342 50 25 chrX 40142101 40142380 -126507916 - B4A SINE B4 -2 290 5 1 891 23 0 0 0 chrX 40142543 40142566 -126507730 + AT_rich Low_complexity Low_complexity 1 23 0 1 891 318 365 33 13 chrX 40143021 40143171 -126507125 - MER5B DNA MER1_type -19 159 7 1 891 4250 118 15 35 chrX 40143220 40143880 -126506416 + Lx4A LINE L1 6412 7058 0 1 891 594 221 0 0 chrX 40144419 40144555 -126505741 + CT-rich Low_complexity Low_complexity 2 137 0 1 891 231 296 0 0 chrX 40146140 40146211 -126504085 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 891 324 319 183 37 chrX 40146376 40146617 -126503679 - L1MC4a LINE L1 -2041 5841 5566 1 891 330 314 116 21 chrX 40147004 40147193 -126503103 - L3b LINE CR1 -263 219 13 1 891 216 0 0 0 chrX 40148907 40148931 -126501365 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 891 531 0 0 0 chrX 40149542 40149601 -126500695 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 891 298 312 187 18 chrX 40149648 40149867 -126500429 - MIRb SINE MIR -3 265 10 1 891 2923 37 34 16 chrX 40150118 40150499 -126499797 + RLTR10 LTR ERVK 1 388 -2 1 891 497 235 161 46 chrX 40150681 40150855 -126499441 + B2_Mm2 SINE B2 2 195 0 1 891 348 276 58 0 chrX 40150880 40150967 -126499329 + MIRb SINE MIR 122 213 -55 1 891 185 221 202 25 chrX 40151457 40151536 -126498760 + MIRb SINE MIR 176 268 0 2 891 442 256 89 27 chrX 40151565 40151790 -126498506 + L1MA8 LINE L1 6040 6278 -13 2 891 1117 287 113 12 chrX 40151823 40152158 -126498138 - ORR1D1 LTR MaLR -5 369 1 2 891 260 212 77 154 chrX 40152250 40152344 -126497952 - MER33 DNA MER1_type -19 305 225 2 891 776 111 119 0 chrX 40152344 40152470 -126497826 - B1_Mus1 SINE Alu -5 143 3 2 891 260 212 77 154 chrX 40152470 40152570 -126497726 - MER33 DNA MER1_type -100 224 126 2 891 395 369 88 73 chrX 40152737 40153147 -126497149 + MLT1J LTR MaLR 97 512 0 2 891 540 282 48 62 chrX 40153478 40153705 -126496591 - MIRb SINE MIR 0 268 45 2 891 294 356 36 30 chrX 40153903 40154071 -126496225 + MIR3 SINE MIR 34 202 -6 2 891 232 182 23 0 chrX 40154737 40154781 -126495515 + (CATA)n Simple_repeat Simple_repeat 2 46 0 2 891 366 171 0 0 chrX 40154781 40154851 -126495445 + (TCTA)n Simple_repeat Simple_repeat 2 71 0 2 891 3332 280 47 33 chrX 40154862 40155930 -126494366 + Lx8 LINE L1 6389 7471 -2 2 891 1121 261 47 28 chrX 40155959 40156322 -126493974 + ORR1D1 LTR MaLR 5 374 0 2 891 2731 251 11 16 chrX 40156322 40156965 -126493331 + ORR1D1-int LTR MaLR 1 640 -730 2 891 1792 167 0 51 chrX 40156965 40157300 -126492996 + L1_Mur1 LINE L1 5381 5698 -188 2 891 491 236 47 129 chrX 40157300 40157470 -126492826 + ORR1D1 LTR MaLR 60 215 -159 2 891 1585 241 45 12 chrX 40157742 40158146 -126492150 + MTD LTR MaLR 1 417 -2 2 891 289 330 42 0 chrX 40160405 40160523 -126489773 - MIR3 SINE MIR 0 208 86 2 891 191 189 36 54 chrX 40160609 40160665 -126489631 + L4 LINE RTE 749 803 -1226 2 891 181 290 137 86 chrX 40160705 40160822 -126489474 - L3 LINE CR1 -382 4107 3985 2 891 354 314 0 19 chrX 40162253 40162360 -126487936 - B1F1 SINE Alu 0 149 45 2 891 1218 232 109 30 chrX 40162559 40162888 -126487408 + MTEb LTR MaLR 1 355 -24 2 891 1031 274 55 36 chrX 40162948 40163311 -126486985 + ORR1D2 LTR MaLR 1 370 0 2 891 239 335 59 71 chrX 40163783 40164037 -126486259 - Lx8 LINE L1 -1 7472 7222 2 891 198 0 0 0 chrX 40164693 40164715 -126485581 + (T)n Simple_repeat Simple_repeat 1 22 0 2 891 3075 75 0 2 chrX 40164925 40165325 -126484971 + MTB LTR MaLR 1 399 -1 2 891 316 187 39 26 chrX 40165502 40165579 -126484717 + MIR SINE MIR 85 162 -100 2 891 954 0 0 0 chrX 40166259 40166365 -126483931 + (GAA)n Simple_repeat Simple_repeat 3 108 0 2 891 519 17 0 0 chrX 40166465 40166525 -126483771 + (GA)n Simple_repeat Simple_repeat 1 60 0 2 891 288 267 270 13 chrX 40168405 40168557 -126481739 - Charlie8 DNA MER1_type -2163 265 75 2 891 22 35 0 0 chrX 40168949 40168978 -126481318 + AT_rich Low_complexity Low_complexity 1 29 0 2 891 324 0 0 0 chrX 40170488 40170524 -126479772 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 891 477 0 0 0 chrX 40170724 40170777 -126479519 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 891 2381 162 140 65 chrX 40171152 40171794 -126478502 - RMER6C LTR ERVK 0 690 1 2 891 277 277 67 59 chrX 40171949 40172068 -126478228 + MIR SINE MIR 124 243 -19 2 891 1151 160 52 33 chrX 40172178 40172345 -126477951 + URR1B DNA MER1_type 8 185 -40 2 891 5928 123 40 15 chrX 40172345 40173280 -126477016 + RMER17B LTR ERVK 1 958 0 2 891 1151 160 52 33 chrX 40173280 40173325 -126476971 + URR1B DNA MER1_type 186 224 -1 2 891 22 35 0 0 chrX 40174224 40174253 -126476043 + AT_rich Low_complexity Low_complexity 1 29 0 2 891 204 167 48 32 chrX 40174330 40174392 -126475904 + (TTGTG)n Simple_repeat Simple_repeat 3 65 0 2 891 37 39 0 0 chrX 40174488 40174539 -126475757 + AT_rich Low_complexity Low_complexity 1 51 0 2 891 3499 75 0 4 chrX 40174578 40175035 -126475261 - L1_Mus2 LINE L1 0 6566 6112 2 891 257 257 0 29 chrX 40175039 40175143 -126475153 + T-rich Low_complexity Low_complexity 5 105 0 2 891 782 122 22 34 chrX 40175142 40175320 -126474976 + CT-rich Low_complexity Low_complexity 4 179 0 2 891 1708 68 36 8 chrX 40175483 40175733 -126474563 + L1_Mus3 LINE L1 6367 6623 -15 2 891 498 33 0 0 chrX 40175733 40175793 -126474503 + (GA)n Simple_repeat Simple_repeat 1 60 0 2 891 792 276 39 0 chrX 40176309 40176512 -126473784 - B3 SINE B2 -5 211 1 2 891 328 222 15 0 chrX 40176565 40176652 -126473644 + RMER17C LTR ERVK 3 62 -348 2 891 562 227 92 7 chrX 40176653 40176795 -126473501 + RMER17C LTR ERVK 257 410 0 2 891 23 33 0 0 chrX 40177165 40177195 -126473101 + AT_rich Low_complexity Low_complexity 1 30 0 2 891 210 37 0 0 chrX 40177507 40177534 -126472762 + (T)n Simple_repeat Simple_repeat 1 27 0 2 891 252 344 0 0 chrX 40177998 40178062 -126472234 - tRNA-Ala-GCA tRNA tRNA -11 64 1 2 891 239 341 115 31 chrX 40178076 40178206 -126472090 - B1F SINE Alu -8 141 1 2 891 1150 64 0 0 chrX 40178992 40179149 -126471147 + L1Md_F2 LINE L1 6423 6579 -3 2 891 678 122 0 0 chrX 40179734 40179841 -126470455 + (TA)n Simple_repeat Simple_repeat 2 108 0 2 891 190 403 0 53 chrX 40180653 40180784 -126469512 - L2c LINE L2 -15 3372 3249 2 891 1263 238 6 107 chrX 40181399 40181762 -126468534 + Lx9 LINE L1 7107 7432 -212 2 891 3147 304 25 29 chrX 40181755 40182830 -126467466 - Lx8 LINE L1 -193 7280 6210 2 891 24 0 0 0 chrX 40184412 40184436 -126465860 + AT_rich Low_complexity Low_complexity 1 24 0 2 891 2135 326 47 30 chrX 40186447 40187424 -126462872 + Lx8 LINE L1 6480 7473 0 2 891 440 277 70 29 chrX 40187429 40187671 -126462625 + L1MB7 LINE L1 5679 5930 -254 2 891 273 290 65 7 chrX 40187724 40187863 -126462433 + L1MB7 LINE L1 6032 6178 0 2 891 342 0 0 0 chrX 40187928 40187966 -126462330 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 891 3267 49 0 7 chrX 40188727 40189135 -126461161 - L1Md_F3 LINE L1 -15 6569 6165 2 891 181 354 7 66 chrX 40189475 40189611 -126460685 + L2c LINE L2 3203 3330 -57 2 891 240 35 0 0 chrX 40189971 40190000 -126460296 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 891 238 211 184 0 chrX 40190066 40190142 -126460154 - Lx9 LINE L1 -8 7636 7547 2 891 375 98 0 0 chrX 40190178 40190239 -126460057 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 891 1044 77 0 0 chrX 40190239 40190381 -126459915 + (GA)n Simple_repeat Simple_repeat 2 144 0 2 891 226 200 171 24 chrX 40190381 40190453 -126459843 - Lx9 LINE L1 -167 7477 7393 2 891 1225 260 16 13 chrX 40190444 40190756 -126459540 + Lx9 LINE L1 7103 7415 -229 2 891 393 117 0 0 chrX 40191768 40191828 -126458468 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 2 891 2192 248 94 5 chrX 40191828 40192404 -126457892 - Lx6 LINE L1 -18 7442 6816 2 891 216 0 0 0 chrX 40192658 40192682 -126457614 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 891 246 350 50 58 chrX 40192851 40193040 -126457256 + MIR SINE MIR 22 207 -55 2 891 205 256 19 33 chrX 40193513 40193587 -126456709 - MIR SINE MIR -101 175 96 2 891 363 23 0 0 chrX 40194031 40194075 -126456221 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 891 1261 275 113 36 chrX 40194213 40194744 -126455552 + Lx9 LINE L1 6919 7490 -154 2 891 22 0 0 0 chrX 40194841 40194863 -126455433 + AT_rich Low_complexity Low_complexity 1 22 0 2 891 613 261 99 50 chrX 40194895 40195137 -126455159 + MER92C LTR ERV1 203 456 -98 2 891 206 81 27 0 chrX 40195166 40195203 -126455093 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2 891 1975 157 16 0 chrX 40195562 40195875 -126454421 - ORR1A2 LTR MaLR -8 319 2 2 891 10596 138 62 14 chrX 40195876 40197749 -126452547 - ORR1A2-int LTR MaLR 0 1963 1 2 891 2138 140 14 4 chrX 40197753 40198108 -126452188 - ORR1A2 LTR MaLR -8 386 1 2 891 1646 276 80 12 chrX 40199143 40199719 -126450577 + Lx8 LINE L1 6859 7473 0 2 891 23 0 0 0 chrX 40200167 40200190 -126450106 + AT_rich Low_complexity Low_complexity 1 23 0 2 891 252 264 46 0 chrX 40200324 40200427 -126449869 + MIR SINE MIR 38 145 -117 2 891 245 151 0 70 chrX 40200720 40200777 -126449519 + A-rich Low_complexity Low_complexity 4 56 0 2 891 474 49 0 0 chrX 40201021 40201082 -126449214 + (CAAAA)n Simple_repeat Simple_repeat 2 62 0 2 891 462 222 167 0 chrX 40201281 40201407 -126448889 + B1_Mus2 SINE Alu 1 147 0 2 891 827 198 16 122 chrX 40202707 40202998 -126447298 - RMER16 LTR ERVK -148 385 1 2 891 7931 82 4 2 chrX 40203108 40204314 -126445982 + L1_Mus3 LINE L1 5423 6631 -7 2 891 36 40 0 0 chrX 40204385 40204435 -126445861 + AT_rich Low_complexity Low_complexity 1 50 0 2 891 644 176 76 0 chrX 40205612 40205731 -126444565 + Lx9 LINE L1 7086 7213 -431 2 891 2750 194 118 131 chrX 40206212 40207126 -126443170 - RMER19B LTR ERVK -7 895 26 2 891 4726 114 19 0 chrX 40207133 40207816 -126442480 - Lx LINE L1 -3 6651 5956 2 891 424 78 0 23 chrX 40207825 40207901 -126442395 - B1_Mus2 SINE Alu 0 147 49 2 891 1655 70 0 9 chrX 40207902 40208133 -126442163 - L1_Mus4 LINE L1 -679 5957 5729 2 891 381 183 0 40 chrX 40208133 40208207 -126442089 + ORR1C2 LTR MaLR 106 176 -208 2 891 3344 89 4 4 chrX 40208207 40208680 -126441616 - L1_Mus3 LINE L1 -517 6121 5649 2 891 1294 111 21 5 chrX 40208680 40208871 -126441425 + L1_Mus3 LINE L1 5444 5637 -246 2 891 1334 68 0 2 chrX 40209031 40209223 -126441073 + L1_Mm LINE L1 3818 4005 -1881 2 891 2688 105 0 22 chrX 40209239 40209647 -126440649 + L1Md_F2 LINE L1 6182 6580 -2 2 891 297 51 0 0 chrX 40210853 40210892 -126439404 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 891 421 210 49 0 chrX 40211246 40211327 -126438969 + MTEb LTR MaLR 4 88 -291 2 891 555 276 7 29 chrX 40211317 40211455 -126438841 + MTEb LTR MaLR 40 174 -205 2 891 1706 38 0 0 chrX 40211459 40211671 -126438625 + L1Md_F2 LINE L1 6369 6580 -2 2 891 1948 72 53 33 chrX 40211694 40211998 -126438298 + L1_Mus1 LINE L1 6258 6567 0 2 891 21 36 0 0 chrX 40212000 40212028 -126438268 + AT_rich Low_complexity Low_complexity 1 28 0 2 891 719 299 43 14 chrX 40212031 40212241 -126438055 + MTEb LTR MaLR 164 379 0 2 891 192 200 0 0 chrX 40212241 40212281 -126438015 - L2b LINE L2 -213 3162 3123 2 891 1041 119 216 0 chrX 40212327 40212512 -126437784 + URR1A DNA MER1_type 1 225 -1 2 891 457 236 146 0 chrX 40213550 40213728 -126436568 + MER33 DNA MER1_type 118 321 -3 2 891 278 348 43 0 chrX 40214095 40214210 -126436086 + Lx8 LINE L1 7040 7159 -314 3 891 468 53 26 13 chrX 40214228 40214305 -126435991 + (TAGA)n Simple_repeat Simple_repeat 1 78 0 3 891 989 126 56 22 chrX 40214325 40214503 -126435793 - B2_Mm2 SINE B2 -10 185 2 3 891 2596 279 68 35 chrX 40214505 40215275 -126435021 - Lx9 LINE L1 -190 7454 6675 3 891 279 0 0 0 chrX 40215275 40215306 -126434990 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 891 2596 279 68 35 chrX 40215306 40215495 -126434801 - Lx9 LINE L1 -970 6674 6464 3 891 5563 147 19 10 chrX 40215489 40216464 -126433832 - MusHAL1 LINE L1 -697 2015 1032 3 891 303 328 81 8 chrX 40216517 40216640 -126433656 - Lx9 LINE L1 -1206 6438 6307 3 891 24 0 0 0 chrX 40216785 40216809 -126433487 + AT_rich Low_complexity Low_complexity 1 24 0 3 891 520 356 21 66 chrX 40216991 40217232 -126433064 - B4A SINE B4 -60 232 3 3 891 559 253 77 54 chrX 40217281 40217594 -126432702 + L1MC4a LINE L1 7542 7861 -21 3 891 207 186 0 0 chrX 40217621 40217664 -126432632 + GA-rich Low_complexity Low_complexity 2 44 0 3 891 228 394 11 11 chrX 40217820 40217915 -126432381 + MER63D DNA AcHobo 274 368 -693 3 891 543 263 39 39 chrX 40218272 40218384 -126431912 + Lx9 LINE L1 7074 7186 -458 3 891 1163 60 0 0 chrX 40218384 40218533 -126431763 - L1_Mus1 LINE L1 0 6567 6419 3 891 543 263 39 39 chrX 40218533 40218598 -126431698 + Lx9 LINE L1 7187 7251 -393 3 891 360 64 0 0 chrX 40218632 40218679 -126431617 + (TATG)n Simple_repeat Simple_repeat 4 50 0 3 891 642 263 7 19 chrX 40218679 40218834 -126431462 - B3A SINE B2 -33 165 13 3 891 744 99 83 15 chrX 40218990 40219123 -126431173 - L1Md_F2 LINE L1 -10 6572 6431 3 891 266 368 9 28 chrX 40221048 40221157 -126429139 - PB1D9 SINE Alu -13 107 1 3 891 865 225 133 9 chrX 40221422 40221655 -126428641 + ORR1D1 LTR MaLR 111 372 -2 3 891 504 158 0 0 chrX 40222338 40222433 -126427863 + (CA)n Simple_repeat Simple_repeat 1 95 0 3 891 703 328 36 23 chrX 40222952 40223258 -126427038 + L1M3e LINE L1 47 356 -6674 3 891 227 266 95 16 chrX 40223731 40223857 -126426439 + L1M3e LINE L1 1941 2076 -4954 3 891 468 0 0 0 chrX 40224011 40224063 -126426233 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 3 891 343 268 151 32 chrX 40224088 40224373 -126425923 + L1M3e LINE L1 1957 2275 -4833 3 891 3528 172 83 79 chrX 40224935 40225107 -126425189 + Lx3B LINE L1 5856 6041 -932 3 891 477 0 0 0 chrX 40225107 40225160 -126425136 + (GGGA)n Simple_repeat Simple_repeat 2 54 0 3 891 3528 172 83 79 chrX 40225160 40225897 -126424399 + Lx3B LINE L1 6042 6769 -204 3 891 220 331 152 21 chrX 40226256 40226401 -126423895 - RSINE1 SINE B4 0 165 2 3 891 327 269 41 55 chrX 40226405 40226552 -126423744 + L1MA9 LINE L1 6141 6284 -28 3 891 456 297 241 53 chrX 40227267 40227472 -126422824 - Lx8 LINE L1 0 7473 7240 3 891 188 0 74 0 chrX 40227472 40227499 -126422797 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 891 456 347 113 36 chrX 40227499 40227750 -126422546 - Lx8 LINE L1 -234 7239 6959 3 891 324 309 18 9 chrX 40227876 40227987 -126422309 - L1MC4 LINE L1 -1233 6809 6698 3 891 15732 124 37 16 chrX 40228293 40231619 -126418677 - L1_Mus3 LINE L1 -2 6636 3242 3 891 511 52 11 13 chrX 40231621 40231697 -126418599 + MTA_Mm LTR MaLR 1 83 -338 3 891 5592 129 49 31 chrX 40231697 40233191 -126417105 - L1VL1 LINE L1 -2133 1565 44 3 891 819 118 0 0 chrX 40233192 40233311 -126416985 + L1_Mm LINE L1 4882 5000 -883 3 111 22859 121 33 30 chrX 40233357 40239266 -126411030 + L1_Mus1 LINE L1 301 6567 0 3 892 637 48 0 0 chrX 40239271 40239355 -126410941 + L1_Mm LINE L1 4987 5070 -813 3 892 1783 96 23 4 chrX 40239860 40240123 -126410173 - Lx2 LINE L1 0 6997 6730 3 892 960 145 82 10 chrX 40240132 40240327 -126409969 + L1_Mur2 LINE L1 3671 3879 -1998 3 892 273 57 0 0 chrX 40240807 40240842 -126409454 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 892 950 146 73 0 chrX 40241209 40241373 -126408923 + B2_Mm2 SINE B2 1 176 -19 3 892 477 0 0 0 chrX 40241495 40241548 -126408748 + (TTCC)n Simple_repeat Simple_repeat 3 55 0 3 892 647 265 107 21 chrX 40241611 40241854 -126408442 - Lx2B LINE L1 -10 6990 6727 3 892 529 262 41 75 chrX 40243600 40243868 -126406428 - Charlie1b DNA MER1_type -2 521 263 3 892 4280 217 47 6 chrX 40243871 40244720 -126405576 + Lx5 LINE L1 6144 7027 -23 3 892 601 319 48 48 chrX 40244720 40245036 -126405260 - Charlie1b DNA MER1_type -204 319 4 3 892 478 237 102 27 chrX 40245476 40245750 -126404546 - L1MA6 LINE L1 -229 6062 5760 3 892 525 282 86 19 chrX 40245762 40245776 -126404520 - L1MA6 LINE L1 -613 5687 5671 3 892 5494 118 8 1 chrX 40245776 40246580 -126403716 - Lx2 LINE L1 -3 6994 6186 3 892 525 282 86 19 chrX 40246580 40246822 -126403474 - L1MA6 LINE L1 -630 5670 5415 3 892 943 285 52 1 chrX 40246837 40247222 -126403074 - L1MA6 LINE L1 -2452 3691 3248 3 892 23 0 0 0 chrX 40248598 40248621 -126401675 + AT_rich Low_complexity Low_complexity 1 23 0 3 892 348 240 42 6 chrX 40250297 40250382 -126399914 - ID4_ SINE ID -64 88 4 3 892 460 287 0 18 chrX 40251398 40251508 -126398788 - RSINE1 SINE B4 0 165 58 3 892 184 30 29 29 chrX 40252683 40252717 -126397579 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 892 423 305 25 20 chrX 40253480 40253684 -126396612 - L1ME2z LINE L1 -324 6120 5916 3 892 1143 68 0 0 chrX 40253905 40254053 -126396243 - B1_Mus1 SINE Alu 0 148 1 3 892 211 380 40 13 chrX 40254073 40254225 -126396071 - MIR SINE MIR -94 168 13 3 892 348 308 56 6 chrX 40254508 40254668 -126395628 + L1M5 LINE L1 5564 5731 -393 3 892 1391 102 0 43 chrX 40255156 40255391 -126394905 - L1Md_F3 LINE L1 -1 6583 6359 3 892 183 261 21 21 chrX 40255477 40255524 -126394772 - MIRb SINE MIR -96 172 126 3 892 227 293 119 17 chrX 40255564 40255682 -126394614 - MIR SINE MIR -63 199 70 3 892 420 262 132 36 chrX 40255876 40256042 -126394254 - MIR3 SINE MIR -5 203 22 3 892 1177 236 190 3 chrX 40256182 40256535 -126393761 + MTD LTR MaLR 1 419 0 3 892 2351 255 75 106 chrX 40256537 40256925 -126393371 + MTD-int LTR MaLR 1 380 -718 3 892 6064 53 0 1 chrX 40256925 40257681 -126392615 + L1Md_F2 LINE L1 5823 6577 -5 3 892 2351 255 75 106 chrX 40257681 40258295 -126392001 + MTD-int LTR MaLR 381 1007 -91 3 892 5292 3 0 0 chrX 40258295 40258882 -126391414 + L1Md_A LINE L1 5996 6582 0 3 892 2351 255 75 106 chrX 40258882 40259011 -126391285 + MTD-int LTR MaLR 1008 1098 0 3 892 1586 245 84 5 chrX 40259014 40259026 -126391270 + MTD LTR MaLR 8 19 -400 3 892 224 30 30 0 chrX 40259026 40259059 -126391237 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 892 1586 245 84 5 chrX 40259059 40259428 -126390868 + MTD LTR MaLR 20 419 0 3 892 1128 276 122 39 chrX 40261355 40261983 -126388313 - L1MB2 LINE L1 -23 6148 5470 3 892 727 226 64 44 chrX 40261983 40262187 -126388109 - B3 SINE B2 -7 209 2 3 892 1128 276 122 39 chrX 40262187 40262309 -126387987 - L1MB2 LINE L1 -702 5469 5335 3 892 715 234 23 29 chrX 40263021 40263193 -126387103 + Lx9 LINE L1 7196 7366 -278 3 892 297 0 0 0 chrX 40263227 40263260 -126387036 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 892 256 390 67 26 chrX 40263420 40263615 -126386681 - MIRb SINE MIR -28 240 38 3 892 200 311 65 37 chrX 40263607 40263714 -126386582 + L2a LINE L2 3302 3411 -15 3 892 329 291 132 5 chrX 40263787 40263977 -126386319 - Lx8 LINE L1 -7 7466 7253 3 892 348 257 50 20 chrX 40263997 40264166 -126386130 - Lx7 LINE L1 0 7696 7563 3 892 183 80 0 0 chrX 40264207 40264232 -126386064 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 892 2747 210 17 17 chrX 40264272 40264854 -126385442 - Lx7 LINE L1 -304 7392 6811 3 892 1296 309 16 0 chrX 40264865 40265253 -126385043 - Lx8 LINE L1 -241 7232 6839 3 892 396 285 24 0 chrX 40265272 40265395 -126384901 + Lx8 LINE L1 6722 6847 -626 3 892 1603 107 25 15 chrX 40265402 40265676 -126384620 - L1_Mus3 LINE L1 0 6638 6362 3 892 1211 54 0 0 chrX 40265683 40265831 -126384465 - B1_Mus1 SINE Alu 0 148 1 3 892 923 261 19 10 chrX 40266294 40266503 -126383793 + B3 SINE B2 1 211 -5 3 892 1442 51 0 6 chrX 40266550 40266728 -126383568 + L1_Mus1 LINE L1 6128 6304 -263 3 892 1829 86 4 0 chrX 40266845 40267089 -126383207 - Lx3_Mus LINE L1 -304 5582 5338 3 892 10131 67 21 12 chrX 40267087 40268494 -126381802 + Lx3_Mus LINE L1 5591 7009 0 3 892 437 271 73 73 chrX 40268594 40268785 -126381511 + MER20 DNA MER1_type 6 196 -23 3 892 333 0 0 0 chrX 40269825 40269862 -126380434 + (TC)n Simple_repeat Simple_repeat 1 37 0 3 892 216 0 0 0 chrX 40269862 40269885 -126380411 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 892 405 0 0 0 chrX 40269885 40269929 -126380367 + (GA)n Simple_repeat Simple_repeat 2 46 0 3 892 302 344 67 30 chrX 40270262 40270397 -126379899 - MIRc SINE MIR -120 148 9 3 892 368 312 7 71 chrX 40272363 40272518 -126377778 - B1F SINE Alu -3 146 2 3 892 478 311 152 34 chrX 40272673 40272909 -126377387 + B4 SINE B4 6 269 -23 3 892 459 52 0 0 chrX 40272909 40272967 -126377329 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 892 422 312 24 0 chrX 40273249 40273374 -126376922 - B1_Mur1 SINE Alu -17 132 5 3 892 637 320 158 9 chrX 40273433 40273750 -126376546 + MLT1A0 LTR MaLR 1 387 -3 3 892 33702 29 0 0 chrX 40273867 40280308 -126369988 - L1Md_T LINE L1 0 6585 48 3 892 1871 26 9 0 chrX 40280347 40280576 -126369720 + L1Md_F3 LINE L1 6340 6570 -14 3 892 301 253 23 11 chrX 40280591 40280679 -126369617 + L2a LINE L2 3305 3393 -33 3 892 243 0 0 0 chrX 40280818 40280845 -126369451 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 3 892 351 0 0 0 chrX 40281151 40281190 -126369106 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 892 288 53 0 0 chrX 40281190 40281228 -126369068 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 892 21 0 0 0 chrX 40281858 40281879 -126368417 + AT_rich Low_complexity Low_complexity 1 21 0 3 892 209 274 54 0 chrX 40283243 40283341 -126366955 - MIRc SINE MIR -125 151 46 3 892 204 97 0 0 chrX 40284376 40284407 -126365889 + (TTA)n Simple_repeat Simple_repeat 2 32 0 3 892 416 365 15 51 chrX 40284407 40284603 -126365693 - MIR SINE MIR -16 246 58 3 892 558 337 25 0 chrX 40285552 40285715 -126364581 + B4 SINE B4 98 264 -28 3 892 482 67 0 13 chrX 40285726 40285802 -126364494 + (CA)n Simple_repeat Simple_repeat 2 76 0 3 892 355 323 185 25 chrX 40286085 40286361 -126363935 + L3 LINE CR1 3282 3601 -888 3 892 4409 43 7 2 chrX 40286545 40287098 -126363198 - L1Md_F2 LINE L1 -3 6579 6024 3 892 281 327 18 9 chrX 40287175 40287286 -126363010 + MLT1M LTR MaLR 225 336 -336 3 892 2199 142 20 36 chrX 40287727 40288167 -126362129 + Lx LINE L1 6216 6648 -6 3 892 822 240 38 19 chrX 40289038 40289250 -126361046 - B3 SINE B2 0 216 1 4 892 204 250 0 18 chrX 40289312 40289369 -126360927 + GA-rich Low_complexity Low_complexity 2 57 0 4 892 262 297 0 0 chrX 40289908 40289972 -126360324 - ID4 SINE ID -6 77 14 4 892 233 324 0 0 chrX 40289911 40289979 -126360317 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 4 892 1018 135 11 0 chrX 40290301 40290479 -126359817 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 892 477 122 0 0 chrX 40290482 40290556 -126359740 + (TC)n Simple_repeat Simple_repeat 2 75 0 4 892 209 314 83 64 chrX 40292893 40293002 -126357294 + MIRb SINE MIR 3 113 -155 4 892 182 154 37 37 chrX 40293149 40293203 -126357093 - MIR SINE MIR -72 136 83 4 892 1527 256 40 35 chrX 40293207 40293290 -126357006 - MTE2a LTR MaLR -3 376 295 4 892 2264 179 5 8 chrX 40293290 40293684 -126356612 + ORR1B1 LTR MaLR 1 393 -1 4 892 1527 256 40 35 chrX 40293684 40293972 -126356324 - MTE2a LTR MaLR -85 294 4 4 892 241 337 18 12 chrX 40294711 40294876 -126355420 + (TA)n Simple_repeat Simple_repeat 1 166 0 4 892 404 37 0 18 chrX 40295036 40295091 -126355205 + (TTTTC)n Simple_repeat Simple_repeat 2 55 0 4 892 916 344 118 36 chrX 40295723 40295817 -126354479 - Tigger9b DNA MER2_type 0 624 522 4 892 633 337 63 19 chrX 40295817 40296180 -126354116 + MTE2b LTR MaLR 1 379 0 4 892 916 344 118 36 chrX 40296180 40296374 -126353922 - Tigger9b DNA MER2_type -103 521 321 4 892 1746 164 16 0 chrX 40296374 40296686 -126353610 + Lx2B LINE L1 6684 7000 0 4 892 916 344 118 36 chrX 40296686 40296973 -126353323 - Tigger9b DNA MER2_type -304 320 1 4 892 754 267 44 5 chrX 40298143 40298346 -126351950 - B3 SINE B2 -5 211 1 4 892 242 29 29 0 chrX 40298368 40298403 -126351893 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 892 373 170 132 0 chrX 40298544 40298650 -126351646 + Lx9 LINE L1 7520 7639 -5 4 892 405 0 0 0 chrX 40299508 40299553 -126350743 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 892 211 319 14 14 chrX 40299574 40299647 -126350649 - B3A SINE B2 -63 135 63 4 892 904 235 159 13 chrX 40299718 40299813 -126350483 - Lx9 LINE L1 -24 7620 7510 4 892 252 0 0 0 chrX 40299813 40299841 -126350455 + (TCTA)n Simple_repeat Simple_repeat 3 30 0 4 892 904 235 159 13 chrX 40299841 40300060 -126350236 - Lx9 LINE L1 -135 7509 7262 4 892 189 0 0 0 chrX 40300114 40300135 -126350161 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 892 27 29 0 0 chrX 40300170 40300204 -126350092 + AT_rich Low_complexity Low_complexity 1 34 0 4 892 21 36 0 0 chrX 40301181 40301209 -126349087 + AT_rich Low_complexity Low_complexity 1 28 0 4 892 279 130 0 0 chrX 40301249 40301303 -126348993 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 892 192 40 0 0 chrX 40303365 40303390 -126346906 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 4 892 450 339 121 61 chrX 40303448 40303888 -126346408 + Lx8 LINE L1 7003 7468 -5 4 892 268 335 122 46 chrX 40303977 40304174 -126346122 + MIRb SINE MIR 45 256 -12 4 892 669 199 40 51 chrX 40305045 40305220 -126345076 - B2_Mm2 SINE B2 -22 173 1 4 892 213 39 0 0 chrX 40305326 40305352 -126344944 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4 892 1072 275 104 60 chrX 40305381 40305718 -126344578 + Lx9 LINE L1 7052 7426 -218 4 892 1883 188 31 3 chrX 40305718 40306075 -126344221 - ORR1B2 LTR MaLR 0 367 1 4 892 6102 198 67 19 chrX 40306075 40307514 -126342782 - ORR1B2-int LTR MaLR 0 1509 1 4 892 1571 204 83 6 chrX 40307514 40307848 -126342448 - ORR1B2 LTR MaLR -2 365 4 4 892 1072 275 104 60 chrX 40307848 40308057 -126342239 + Lx9 LINE L1 7427 7622 -22 4 892 219 125 0 0 chrX 40308162 40308202 -126342094 + (A)n Simple_repeat Simple_repeat 1 40 0 4 892 220 234 0 0 chrX 40308308 40308355 -126341941 + (TATATG)n Simple_repeat Simple_repeat 4 50 0 4 892 806 316 5 23 chrX 40308748 40308968 -126341328 + ID_B1 SINE B4 3 218 -6 4 892 201 74 0 0 chrX 40309057 40309084 -126341212 + (TA)n Simple_repeat Simple_repeat 1 27 0 4 892 26 98 0 0 chrX 40309106 40309188 -126341108 + AT_rich Low_complexity Low_complexity 1 82 0 4 892 21 36 0 0 chrX 40309285 40309313 -126340983 + AT_rich Low_complexity Low_complexity 1 28 0 4 892 304 303 27 104 chrX 40309577 40309701 -126340595 + L1MB2 LINE L1 5168 5277 -863 4 892 903 249 180 58 chrX 40309701 40310029 -126340267 - ORR1D1 LTR MaLR -4 370 3 4 892 963 306 118 14 chrX 40310029 40310579 -126339717 + L1MB2 LINE L1 5282 5888 -283 4 892 605 329 65 26 chrX 40310579 40310920 -126339376 - MLT1A LTR MaLR -47 343 1 4 892 187 254 0 78 chrX 40311355 40311419 -126338877 - MIRm SINE MIR -127 149 91 4 892 826 320 16 20 chrX 40312414 40312666 -126337630 - Lx8 LINE L1 -173 7300 7050 4 892 668 244 60 16 chrX 40312647 40312830 -126337466 + Lx8 LINE L1 6829 7019 -454 4 892 270 0 0 0 chrX 40314582 40314612 -126335684 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 892 265 348 75 37 chrX 40314723 40314911 -126335385 - B3A SINE B2 0 198 4 4 892 599 325 0 30 chrX 40314747 40314915 -126335381 - RSINE1 SINE B4 -2 163 1 4 892 3345 59 2 0 chrX 40314949 40315371 -126334925 + L1_Mus1 LINE L1 6145 6567 0 4 892 186 43 0 0 chrX 40315401 40315424 -126334872 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 892 690 246 75 12 chrX 40316105 40316278 -126334018 - MIRc SINE MIR -11 257 74 4 892 304 314 127 6 chrX 40316420 40316577 -126333719 + MER112 DNA MER1_type 3 178 -83 4 892 2242 216 117 7 chrX 40316800 40317396 -126332900 - Lx9 LINE L1 -4 7640 6979 4 892 285 128 0 0 chrX 40317621 40317668 -126332628 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 4 892 2738 223 56 83 chrX 40319724 40320599 -126329697 + Lx7 LINE L1 6846 7696 0 4 892 301 343 24 49 chrX 40321613 40321750 -126328546 - MIR3 SINE MIR -37 171 37 4 892 323 157 197 22 chrX 40322003 40322140 -126328156 - Lx9 LINE L1 -1 7643 7483 4 892 594 151 19 0 chrX 40325296 40325402 -126324894 - L1_Mur3 LINE L1 -1642 4238 4131 4 892 1260 221 6 45 chrX 40325401 40325714 -126324582 + Lx6 LINE L1 7157 7457 -3 4 892 1736 44 0 26 chrX 40325725 40325958 -126324338 + L1Md_F2 LINE L1 6344 6570 -12 4 892 213 39 0 0 chrX 40326182 40326208 -126324088 + (A)n Simple_repeat Simple_repeat 1 26 0 4 892 285 362 81 13 chrX 40326388 40326623 -126323673 + LTR16B LTR ERVL 182 432 -31 4 892 310 31 62 15 chrX 40326631 40326696 -126323600 + (TTA)n Simple_repeat Simple_repeat 2 69 0 4 892 201 39 0 0 chrX 40326998 40327024 -126323272 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 4 892 849 195 207 0 chrX 40328049 40328218 -126322078 - B3 SINE B2 -10 206 3 4 892 1027 325 77 37 chrX 40329077 40329595 -126320701 + MER44B DNA MER2_type 2 540 -10 4 892 202 287 35 53 chrX 40329713 40329827 -126320469 - MIRb SINE MIR -76 192 81 4 892 738 109 0 0 chrX 40331820 40331930 -126318366 + (CA)n Simple_repeat Simple_repeat 1 110 0 4 892 239 333 18 36 chrX 40332054 40332166 -126318130 - BC1_Mm scRNA scRNA -37 115 6 4 892 256 368 178 31 chrX 40332440 40332827 -126317469 + MLT1J2 LTR MaLR 5 448 0 4 892 26 50 0 0 chrX 40333162 40333202 -126317094 + AT_rich Low_complexity Low_complexity 1 40 0 4 892 2028 298 115 75 chrX 40333838 40334926 -126315370 + Lx6 LINE L1 6059 7430 -30 4 892 278 98 20 0 chrX 40334956 40335007 -126315289 + (CAT)n Simple_repeat Simple_repeat 2 53 0 4 892 293 316 42 37 chrX 40335422 40335636 -126314660 + L1MEf LINE L1 561 775 -5425 4 892 3415 15 8 0 chrX 40336607 40337000 -126313296 - MTA_Mm LTR MaLR 0 396 1 4 892 843 225 54 49 chrX 40337157 40337381 -126312915 + URR1A DNA MER1_type 1 225 -1 4 892 1135 313 50 12 chrX 40337542 40338118 -126312178 - Tigger2b DNA MER2_type -124 602 5 4 892 217 162 0 0 chrX 40338547 40338584 -126311712 + B3A SINE B2 3 39 -159 4 892 467 337 50 10 chrX 40339405 40339603 -126310693 + Lx8 LINE L1 7135 7340 -133 4 892 315 0 0 0 chrX 40340021 40340056 -126310240 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 892 810 259 61 0 chrX 40343142 40343339 -126306957 - B3 SINE B2 -6 210 2 4 892 420 322 16 0 chrX 40343794 40343915 -126306381 + Lx8 LINE L1 7048 7170 -303 4 892 493 228 19 29 chrX 40344093 40344189 -126306107 + B3 SINE B2 106 202 -14 4 892 327 49 0 0 chrX 40344189 40344230 -126306066 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 4 892 361 261 132 33 chrX 40344242 40344424 -126305872 + L1MA5 LINE L1 4556 4755 -1388 4 892 291 294 249 23 chrX 40344443 40344704 -126305592 + L1MA5 LINE L1 4819 5138 -1005 4 892 341 257 92 33 chrX 40344711 40344864 -126305432 + L1MA5 LINE L1 5618 5779 -512 4 892 302 248 89 0 chrX 40344910 40345011 -126305285 + L1MA5 LINE L1 6174 6283 -17 4 892 4069 34 0 0 chrX 40345032 40345510 -126304786 - L1Md_T LINE L1 -1 6581 6104 4 892 247 258 29 97 chrX 40345517 40345556 -126304740 + PB1D10 SINE Alu 22 61 -56 4 892 5107 113 78 4 chrX 40345556 40346367 -126303929 + Lx3A LINE L1 6107 6977 -4 4 892 309 51 0 0 chrX 40346367 40346406 -126303890 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 4 892 247 258 29 97 chrX 40346406 40346468 -126303828 + PB1D10 SINE Alu 62 116 -1 4 892 360 0 0 0 chrX 40346518 40346558 -126303738 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 892 824 331 31 16 chrX 40346657 40346912 -126303384 + MTE2a LTR MaLR 18 276 -103 4 892 243 209 20 0 chrX 40346914 40346970 -126303326 + L2a LINE L2 3330 3425 -1 4 892 409 284 36 36 chrX 40348909 40349077 -126301219 + RLTR23 LTR ERV1 263 430 0 4 892 252 354 137 51 chrX 40350449 40350785 -126299511 + L2c LINE L2 3010 3374 -13 4 892 237 340 20 10 chrX 40352587 40352688 -126297608 + L1M5 LINE L1 5496 5597 -527 4 892 24 53 0 0 chrX 40352775 40352813 -126297483 + AT_rich Low_complexity Low_complexity 1 38 0 4 892 541 346 32 0 chrX 40352835 40353020 -126297276 + MTE-int LTR MaLR 26 216 -1364 4 892 534 173 0 41 chrX 40353108 40353253 -126297043 + CT-rich Low_complexity Low_complexity 4 142 0 4 892 23 78 0 0 chrX 40354428 40354479 -126295817 + AT_rich Low_complexity Low_complexity 1 51 0 4 892 854 318 48 45 chrX 40354858 40354897 -126295399 + B4A SINE B4 2 41 -251 4 892 338 149 64 0 chrX 40354897 40354991 -126295305 - L1Md_A LINE L1 0 6582 6483 4 892 854 318 48 45 chrX 40354991 40355241 -126295055 + B4A SINE B4 42 292 0 4 892 249 275 105 15 chrX 40355432 40355565 -126294731 - MamRep434 DNA TcMar -178 248 104 5 892 1177 218 14 28 chrX 40355693 40355976 -126294320 - Lx9 LINE L1 -169 7475 7197 5 892 1295 252 102 15 chrX 40355978 40356564 -126293732 + Lx9 LINE L1 5383 6053 -1591 5 892 1296 219 48 53 chrX 40356989 40357157 -126293139 + ORR1D1 LTR MaLR 1 166 -208 5 892 414 0 0 0 chrX 40357157 40357203 -126293093 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 892 1296 219 48 53 chrX 40357203 40357410 -126292886 + ORR1D1 LTR MaLR 167 374 0 5 892 190 316 108 79 chrX 40357456 40357659 -126292637 - MIRb SINE MIR -57 211 3 5 892 366 129 0 0 chrX 40357975 40358037 -126292259 + (T)n Simple_repeat Simple_repeat 1 62 0 5 892 1262 34 0 0 chrX 40358040 40358187 -126292109 - B1_Mm SINE Alu 0 147 1 5 892 509 340 14 0 chrX 40359048 40359195 -126291101 + ID_B1 SINE B4 69 217 -7 5 892 209 341 38 53 chrX 40359868 40360001 -126290295 + L2c LINE L2 3256 3386 -1 5 892 25 31 0 0 chrX 40360870 40360902 -126289394 + AT_rich Low_complexity Low_complexity 1 32 0 5 892 1052 301 94 6 chrX 40360908 40361236 -126289060 - MTEa LTR MaLR -5 374 18 5 892 980 362 40 31 chrX 40361278 40361328 -126288968 - Lx8 LINE L1 -6 7467 7415 5 892 4990 52 2 0 chrX 40361328 40361943 -126288353 - L1Md_F2 LINE L1 -14 6568 5953 5 892 980 362 40 31 chrX 40361943 40362539 -126287757 - Lx8 LINE L1 -59 7414 6815 5 892 811 190 28 39 chrX 40362886 40363067 -126287229 + B2_Mm2 SINE B2 1 179 -16 5 892 345 47 0 0 chrX 40364739 40364782 -126285514 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 5 892 483 87 0 0 chrX 40364997 40365066 -126285230 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 892 369 0 0 0 chrX 40365066 40365106 -126285190 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 892 333 0 0 0 chrX 40365106 40365142 -126285154 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 892 332 235 12 36 chrX 40366778 40366862 -126283434 - LFSINE_Vert SINE SINE -3 456 375 5 892 2536 72 29 6 chrX 40367573 40367921 -126282375 - L1Md_F2 LINE L1 0 6582 6227 5 892 3276 59 7 16 chrX 40368262 40368713 -126281583 - L1Md_F2 LINE L1 0 6582 6137 5 892 1737 78 9 0 chrX 40368710 40368942 -126281354 + L1Md_F2 LINE L1 5925 6158 -424 5 893 220 318 143 18 chrX 40370777 40370889 -126279407 + MIR SINE MIR 101 226 -36 5 893 25 0 0 0 chrX 40370912 40370937 -126279359 + AT_rich Low_complexity Low_complexity 1 25 0 5 893 22 35 0 0 chrX 40372092 40372121 -126278175 + AT_rich Low_complexity Low_complexity 1 29 0 5 893 191 306 0 0 chrX 40373255 40373304 -126276992 - MIR SINE MIR -69 139 91 5 893 40563 15 3 6 chrX 40374200 40380647 -126269649 - L1Md_A LINE L1 -1 6581 160 5 893 244 304 130 22 chrX 40381445 40381583 -126268713 + MIRb SINE MIR 6 158 -110 5 893 275 270 40 13 chrX 40381878 40381953 -126268343 + ID4 SINE ID 3 79 -4 5 893 264 320 130 46 chrX 40381989 40382097 -126268199 + PB1D10 SINE Alu 1 117 0 5 893 1151 233 102 77 chrX 40382141 40382504 -126267792 - MTEb LTR MaLR -3 376 5 5 893 369 0 0 0 chrX 40383081 40383122 -126267174 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 893 504 0 0 0 chrX 40383638 40383694 -126266602 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 893 201 74 0 0 chrX 40383694 40383720 -126266576 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 893 938 184 6 0 chrX 40384052 40384231 -126266065 + L1_Mur2 LINE L1 2352 2531 -3346 5 893 3771 60 6 0 chrX 40384496 40384976 -126265320 + L1Md_F2 LINE L1 6097 6579 -3 5 893 5756 57 12 16 chrX 40385072 40385833 -126264463 + L1Md_F2 LINE L1 5825 6582 0 5 893 35 54 0 0 chrX 40387944 40388000 -126262296 + AT_rich Low_complexity Low_complexity 1 56 0 5 893 566 294 19 12 chrX 40388015 40388177 -126262119 + B3 SINE B2 47 209 -7 5 893 234 236 117 39 chrX 40388409 40388537 -126261759 - Lx9 LINE L1 -51 7593 7456 5 893 1479 205 16 66 chrX 40388537 40388918 -126261378 - RMER10B LTR ERVL 0 398 37 5 893 351 0 0 0 chrX 40388937 40388976 -126261320 + (TATG)n Simple_repeat Simple_repeat 2 40 0 5 893 1236 112 78 0 chrX 40388976 40389182 -126261114 - Lx LINE L1 -14 6640 6419 5 893 355 279 41 0 chrX 40389221 40389343 -126260953 - Lx9 LINE L1 -186 7458 7332 5 893 870 297 35 35 chrX 40389367 40389684 -126260612 + Lx9 LINE L1 6857 7173 -471 5 893 320 290 3 3 chrX 40389996 40390078 -126260218 - B4A SINE B4 -71 94 12 5 893 203 167 0 0 chrX 40390179 40390221 -126260075 + (TTAA)n Simple_repeat Simple_repeat 4 45 0 5 893 24 32 0 0 chrX 40392440 40392471 -126257825 + AT_rich Low_complexity Low_complexity 1 31 0 5 893 236 188 16 0 chrX 40393030 40393094 -126257202 + CT-rich Low_complexity Low_complexity 1 65 0 5 893 23 33 0 0 chrX 40393364 40393394 -126256902 + AT_rich Low_complexity Low_complexity 1 30 0 5 893 670 364 52 65 chrX 40394199 40394581 -126255715 + MLT1E1A LTR MaLR 298 674 -6 5 893 3773 101 4 7 chrX 40394934 40395472 -126254824 - L1_Mus3 LINE L1 -78 5805 5270 5 893 4867 101 101 1 chrX 40395472 40396207 -126254089 + L1_Mus3 LINE L1 5824 6631 -7 5 893 245 189 0 0 chrX 40396320 40396373 -126253923 + A-rich Low_complexity Low_complexity 1 53 0 5 893 423 0 0 0 chrX 40397447 40397494 -126252802 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 893 342 0 0 0 chrX 40397494 40397531 -126252765 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 893 233 356 137 50 chrX 40399054 40399391 -126250905 - L2a LINE L2 -5 3421 3056 5 893 8003 126 58 84 chrX 40400178 40401731 -126248565 + RLTR21 LTR ERVK 3 1515 -57 5 893 211 207 33 33 chrX 40402415 40402505 -126247791 + (TATAA)n Simple_repeat Simple_repeat 5 94 0 5 893 27 0 0 0 chrX 40403358 40403385 -126246911 + AT_rich Low_complexity Low_complexity 1 27 0 5 893 342 0 0 0 chrX 40403622 40403660 -126246636 + (TAGA)n Simple_repeat Simple_repeat 2 39 0 5 893 21 0 0 0 chrX 40404346 40404367 -126245929 + AT_rich Low_complexity Low_complexity 1 21 0 5 893 198 0 0 0 chrX 40406293 40406315 -126243981 + (TA)n Simple_repeat Simple_repeat 2 23 0 5 893 306 308 9 46 chrX 40407289 40407398 -126242898 + RSINE1 SINE B4 4 108 -57 5 893 180 152 0 0 chrX 40407988 40408021 -126242275 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 893 22 0 0 0 chrX 40408346 40408368 -126241928 + AT_rich Low_complexity Low_complexity 1 22 0 5 893 1600 269 48 23 chrX 40408373 40408905 -126241391 - Lx6 LINE L1 -23 7437 6500 5 893 6490 50 18 2 chrX 40409069 40409888 -126240408 + L1Md_F2 LINE L1 5751 6582 0 5 893 385 338 70 64 chrX 40410100 40410442 -126239854 + L1MC LINE L1 5314 5657 -2225 5 893 191 384 0 57 chrX 40412324 40412429 -126237867 - L2c LINE L2 -11 3376 3278 5 893 3093 79 13 9 chrX 40412638 40413085 -126237211 + L1_Mur1 LINE L1 5142 5590 -296 5 893 5627 133 12 36 chrX 40413087 40414098 -126236198 + L1Md_T LINE L1 5596 6582 0 5 893 4026 130 25 21 chrX 40414101 40414285 -126236011 + Lx3A LINE L1 6296 6482 -499 5 893 2999 62 10 0 chrX 40414285 40414671 -126235625 + RLTR10 LTR ERVK 1 390 0 5 893 4026 130 25 21 chrX 40414671 40415154 -126235142 + Lx3A LINE L1 6483 6966 -15 5 893 270 0 0 0 chrX 40415156 40415186 -126235110 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 5 893 1495 218 36 12 chrX 40415470 40415805 -126234491 + MT2A LTR ERVL 191 533 0 5 893 483 288 8 25 chrX 40415884 40416005 -126234291 - B1_Mur2 SINE Alu -1 148 30 5 893 206 250 0 0 chrX 40416009 40416061 -126234235 + T-rich Low_complexity Low_complexity 1 52 0 5 893 2702 94 23 5 chrX 40416122 40416559 -126233737 - MusHAL1 LINE L1 -626 2086 1642 5 893 8062 87 16 27 chrX 40416556 40417815 -126232481 + MusHAL1 LINE L1 424 1668 -1044 5 893 22429 229 43 30 chrX 40417820 40420896 -126229400 + MERVL_2A-int LTR ERVL 73 3227 -2534 5 893 3206 34 10 5 chrX 40420896 40421282 -126229014 - L1Md_F2 LINE L1 -14 6568 6181 5 893 22429 229 43 30 chrX 40421282 40421809 -126228487 + MERVL_2A-int LTR ERVL 3228 3744 -2017 5 893 654 228 205 0 chrX 40421809 40421980 -126228316 - B3 SINE B2 -7 209 4 5 893 22429 229 43 30 chrX 40421980 40423691 -126226605 + MERVL_2A-int LTR ERVL 3745 5460 -301 5 893 337 169 25 38 chrX 40423675 40423755 -126226541 + MERVL_2A-int LTR ERVL 5682 5760 -1 5 893 2601 190 46 2 chrX 40423765 40424267 -126226029 + MT2A LTR ERVL 10 533 0 5 893 233 370 0 27 chrX 40424458 40424533 -126225763 - L2b LINE L2 -18 3357 3285 5 893 21 0 0 0 chrX 40425357 40425378 -126224918 + AT_rich Low_complexity Low_complexity 1 21 0 5 893 237 178 0 0 chrX 40428641 40428686 -126221610 + GA-rich Low_complexity Low_complexity 1 45 0 5 893 221 0 0 33 chrX 40428928 40428958 -126221338 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 5 893 863 120 114 0 chrX 40429094 40429252 -126221044 + Lx3A LINE L1 6806 6981 0 5 893 207 0 0 0 chrX 40429379 40429402 -126220894 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 893 440 295 42 83 chrX 40430404 40430596 -126219700 - MER5A DNA MER1_type -5 184 1 5 893 389 266 38 1 chrX 40431784 40431936 -126218360 + L1M5 LINE L1 5318 5473 -701 5 893 1031 258 65 16 chrX 40431979 40432227 -126218069 - ORR1C2 LTR MaLR -3 381 122 5 893 2821 79 36 22 chrX 40432227 40432528 -126217768 + L1_Mus4 LINE L1 5710 6025 -611 5 893 2771 68 16 5 chrX 40432528 40432912 -126217384 + RLTR10 LTR ERVK 1 388 -2 5 893 2821 79 36 22 chrX 40432912 40433023 -126217273 + L1_Mus4 LINE L1 6026 6128 -508 5 893 7508 49 30 2 chrX 40433031 40433975 -126216321 - L1Md_F2 LINE L1 -19 6563 5594 5 893 2717 125 89 0 chrX 40433975 40434468 -126215828 + L1_Mus4 LINE L1 6142 6636 0 5 893 553 209 0 82 chrX 40434471 40434617 -126215679 - ORR1C2 LTR MaLR -236 148 15 5 893 449 342 39 26 chrX 40434617 40434926 -126215370 + L1M5 LINE L1 5476 5788 -391 5 893 1359 282 65 18 chrX 40435076 40435459 -126214837 - MTD LTR MaLR -14 405 5 5 893 35 41 0 0 chrX 40436329 40436378 -126213918 + AT_rich Low_complexity Low_complexity 1 49 0 5 893 23 54 0 0 chrX 40436617 40436654 -126213642 + AT_rich Low_complexity Low_complexity 1 37 0 5 893 4327 192 152 14 chrX 40438862 40439938 -126210358 + Lx2B LINE L1 5834 7057 -1 5 893 232 27 0 0 chrX 40439975 40440012 -126210284 + L1_Mus4 LINE L1 6593 6629 -7 5 893 369 0 0 0 chrX 40440325 40440366 -126209930 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 893 27515 32 0 0 chrX 40440522 40445938 -126204358 + L1Md_Gf LINE L1 271 5782 -104 5 893 374 291 48 88 chrX 40446544 40446875 -126203421 + L1ME1 LINE L1 5597 5914 -265 5 893 683 307 91 48 chrX 40446956 40447295 -126203001 + MTE2b LTR MaLR 1 320 -59 6 893 2762 69 0 6 chrX 40447311 40447676 -126202620 - L1Md_A LINE L1 -1 6581 6219 6 893 3554 42 2 0 chrX 40447679 40448105 -126202191 + L1Md_F2 LINE L1 5828 6254 -328 6 893 652 337 94 33 chrX 40448139 40448248 -126202048 - Lx8 LINE L1 -4 7469 7351 6 893 672 150 24 0 chrX 40448248 40448375 -126201921 - Lx LINE L1 -10 6644 6515 6 893 652 337 94 33 chrX 40448375 40448753 -126201543 - Lx8 LINE L1 -123 7350 6953 6 893 584 171 34 0 chrX 40448759 40448876 -126201420 + B2_Mm1t SINE B2 72 192 -1 6 893 677 295 5 24 chrX 40448906 40449111 -126201185 - Lx7 LINE L1 -909 6787 6587 6 893 321 328 49 49 chrX 40449272 40449577 -126200719 + L1ME1 LINE L1 5874 6178 -1 6 893 774 237 0 0 chrX 40450136 40450275 -126200021 - B1_Mur2 SINE Alu -5 144 6 6 893 611 249 82 28 chrX 40450795 40450977 -126199319 - MIRb SINE MIR -18 250 59 6 893 603 0 0 0 chrX 40452662 40452729 -126197567 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 6 893 1545 101 12 24 chrX 40452732 40452985 -126197311 - L1_Mus3 LINE L1 -11 6627 6378 6 893 5120 32 12 14 chrX 40453665 40454306 -126195990 + L1Md_F3 LINE L1 5944 6583 -1 6 893 1514 163 0 15 chrX 40454615 40454876 -126195420 + Lx4A LINE L1 6796 7052 -6 6 893 207 0 0 0 chrX 40454878 40454901 -126195395 + (CTAA)n Simple_repeat Simple_repeat 3 25 0 6 893 23 33 0 0 chrX 40454901 40454931 -126195365 + AT_rich Low_complexity Low_complexity 1 30 0 6 893 240 291 0 0 chrX 40455177 40455232 -126195064 - B3A SINE B2 -138 60 6 6 893 675 224 347 16 chrX 40456071 40456379 -126193917 + Lx9 LINE L1 7235 7644 0 6 893 565 312 93 50 chrX 40456903 40457121 -126193175 - B4A SINE B4 0 292 60 6 893 1180 55 0 0 chrX 40457121 40457267 -126193029 + B1_Mm SINE Alu 1 146 -1 6 893 504 0 0 0 chrX 40457268 40457324 -126192972 + (CAAAA)n Simple_repeat Simple_repeat 3 58 0 6 893 565 312 93 50 chrX 40457324 40457383 -126192913 - B4A SINE B4 -233 59 1 6 893 229 118 0 0 chrX 40458399 40458433 -126191863 + Lx5 LINE L1 6219 6252 -798 6 893 183 42 0 0 chrX 40458536 40458560 -126191736 + (CAA)n Simple_repeat Simple_repeat 2 25 0 6 893 251 165 66 28 chrX 40459631 40459737 -126190559 + (TA)n Simple_repeat Simple_repeat 2 111 0 6 893 321 352 14 0 chrX 40459852 40459991 -126190305 - L1MC LINE L1 -2136 5746 5606 6 893 6734 79 24 1 chrX 40460341 40461265 -126189031 + Lx3_Mus LINE L1 6057 7001 -8 6 893 7023 49 1 1 chrX 40461297 40462162 -126188134 + L1Md_F2 LINE L1 5706 6570 -12 6 893 387 258 90 28 chrX 40462867 40463132 -126187164 + Charlie5 DNA MER1_type 2351 2585 -39 6 893 380 111 0 16 chrX 40463215 40463279 -126187017 + (TA)n Simple_repeat Simple_repeat 1 63 0 6 893 922 306 89 20 chrX 40463357 40463704 -126186592 - Tigger7 DNA MER2_type -2065 426 56 6 893 254 293 63 119 chrX 40464333 40464492 -126185804 - MT2B LTR ERVL -353 248 99 6 893 257 186 0 0 chrX 40464586 40464629 -126185667 + L1_Mur3 LINE L1 260 302 -7410 6 893 1766 229 24 2 chrX 40464625 40465040 -126185256 + Lx7 LINE L1 6804 7227 -469 6 893 1158 68 0 0 chrX 40465155 40465302 -126184994 - B1_Mus1 SINE Alu 0 148 2 6 893 24 53 0 0 chrX 40465357 40465395 -126184901 + AT_rich Low_complexity Low_complexity 1 38 0 6 893 410 212 81 0 chrX 40465472 40465571 -126184725 + Lx9 LINE L1 7536 7642 -2 6 893 798 265 154 5 chrX 40465590 40465973 -126184323 + Lx9 LINE L1 7205 7644 0 6 893 531 326 61 55 chrX 40466425 40466753 -126183543 + MLT1D LTR MaLR 1 330 -175 6 893 421 297 22 22 chrX 40467803 40468001 -126182295 - L1ME2z LINE L1 -285 5898 5703 6 893 1891 168 8 14 chrX 40468025 40468381 -126181915 - L1_Mm LINE L1 -774 5109 4756 6 893 5334 118 10 1 chrX 40468381 40469171 -126181125 + Lx LINE L1 5853 6649 -5 6 893 225 317 31 54 chrX 40469319 40469449 -126180847 + L2a LINE L2 3300 3426 0 6 893 531 45 0 0 chrX 40469499 40469565 -126180731 + (TCTA)n Simple_repeat Simple_repeat 2 67 0 6 893 325 272 0 0 chrX 40471521 40471602 -126178694 - Lx6 LINE L1 -706 6754 6674 6 893 670 170 32 0 chrX 40471577 40471722 -126178574 - Lx6 LINE L1 -889 6571 6291 6 893 2777 230 71 11 chrX 40471721 40472367 -126177929 + Lx6 LINE L1 6765 7449 -11 6 893 30 0 0 0 chrX 40472792 40472822 -126177474 + AT_rich Low_complexity Low_complexity 1 30 0 6 893 1252 204 11 82 chrX 40472824 40473048 -126177248 + Lx7 LINE L1 7355 7561 -135 6 893 1567 21 21 0 chrX 40473048 40473235 -126177061 + B2_Mm1a SINE B2 1 191 -2 6 893 1252 204 11 82 chrX 40473235 40473378 -126176918 + Lx7 LINE L1 7562 7696 0 6 893 283 398 49 0 chrX 40474284 40474407 -126175889 - B1F SINE Alu -8 141 13 6 893 198 0 0 0 chrX 40474595 40474617 -126175679 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 6 893 351 0 0 0 chrX 40474732 40474771 -126175525 + (TC)n Simple_repeat Simple_repeat 1 39 0 6 893 338 61 20 0 chrX 40475620 40475669 -126174627 + (GGA)n Simple_repeat Simple_repeat 2 51 0 6 893 185 219 49 0 chrX 40476692 40476733 -126173563 - L2c LINE L2 -14 3373 3331 6 893 396 0 0 0 chrX 40477480 40477524 -126172772 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 893 411 286 160 20 chrX 40477745 40477895 -126172401 + B3A SINE B2 5 175 -23 6 893 441 0 0 0 chrX 40477898 40477947 -126172349 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 893 24 0 0 0 chrX 40478474 40478498 -126171798 + AT_rich Low_complexity Low_complexity 1 24 0 6 893 306 0 0 0 chrX 40478617 40478651 -126171645 + (TA)n Simple_repeat Simple_repeat 1 34 0 6 893 261 337 22 0 chrX 40480228 40480320 -126169976 + L2a LINE L2 3332 3425 -1 6 893 255 311 22 0 chrX 40480419 40480509 -126169787 + L2 LINE L2 2424 2515 -904 6 893 393 75 0 0 chrX 40480610 40480663 -126169633 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 6 893 388 294 56 16 chrX 40480765 40480909 -126169387 + B1F SINE Alu 1 149 0 6 893 23 0 0 0 chrX 40480937 40480960 -126169336 + AT_rich Low_complexity Low_complexity 1 23 0 6 893 730 145 14 0 chrX 40481003 40481141 -126169155 + (CA)n Simple_repeat Simple_repeat 1 140 0 6 893 22 0 0 0 chrX 40483764 40483786 -126166510 + AT_rich Low_complexity Low_complexity 1 22 0 6 893 1676 160 33 33 chrX 40485364 40485693 -126164603 - ORR1A4 LTR MaLR 0 329 1 6 893 1812 285 18 46 chrX 40485699 40486265 -126164031 + Lx9 LINE L1 6449 6998 -646 6 893 2239 230 164 14 chrX 40486289 40486395 -126163901 - Lx9 LINE L1 -22 7622 7514 6 893 483 33 0 0 chrX 40486395 40486456 -126163840 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 893 2239 230 164 14 chrX 40486456 40487058 -126163238 - Lx9 LINE L1 -131 7513 6809 6 893 7243 89 12 2 chrX 40487066 40488680 -126161616 - L1_Mus2 LINE L1 -2 6564 4936 6 893 741 244 51 0 chrX 40488716 40488892 -126161404 - Lx9 LINE L1 -917 6727 6543 6 893 1383 280 55 65 chrX 40488892 40489552 -126160744 + Lx9 LINE L1 6985 7637 -7 6 893 402 338 6 31 chrX 40490232 40490391 -126159905 + RSINE1 SINE B4 3 157 -8 6 893 214 147 43 29 chrX 40490812 40490882 -126159414 + (TA)n Simple_repeat Simple_repeat 2 72 0 6 893 190 280 154 39 chrX 40491651 40491755 -126158541 + L2a LINE L2 3307 3422 -4 6 893 183 204 0 0 chrX 40492443 40492487 -126157809 + (TAA)n Simple_repeat Simple_repeat 2 45 0 6 893 258 192 0 0 chrX 40492725 40492777 -126157519 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 893 180 97 0 0 chrX 40492774 40492805 -126157491 + (TTA)n Simple_repeat Simple_repeat 2 32 0 6 893 658 312 23 39 chrX 40493565 40493825 -126156471 - L2 LINE L2 -573 2846 2591 6 893 404 362 17 0 chrX 40493931 40494108 -126156188 - LTR16E2 LTR ERVL -6 562 383 6 893 3084 122 69 2 chrX 40494560 40495051 -126155245 - Lx3A LINE L1 0 6981 6458 6 893 191 321 203 15 chrX 40495069 40495202 -126155094 - L2 LINE L2 -1090 2329 2172 6 893 721 246 23 4 chrX 40495323 40495571 -126154725 + Lx9 LINE L1 5695 5984 -1660 6 893 3573 226 134 7 chrX 40495630 40496599 -126153697 + Lx3C LINE L1 5881 6972 -4 6 893 5806 58 0 0 chrX 40496604 40497329 -126152967 + L1Md_F2 LINE L1 4862 5586 -297 6 893 8040 49 2 0 chrX 40497329 40498408 -126151888 + L1Md_F2 LINE L1 5587 6582 0 6 893 1520 301 118 35 chrX 40498608 40499356 -126150940 + Lx9 LINE L1 6472 7281 -363 6 893 498 61 0 0 chrX 40499492 40499558 -126150738 + (TG)n Simple_repeat Simple_repeat 2 67 0 6 893 2328 103 9 0 chrX 40499671 40500000 -126150296 + L1_Mur1 LINE L1 5533 5864 -22 6 893 6636 116 73 6 chrX 40500000 40501074 -126149222 + Lx3_Mus LINE L1 5862 7007 -2 1 894 269 309 42 22 chrX 40501307 40501426 -126148870 + MIRc SINE MIR 56 179 -89 2 894 180 0 0 0 chrX 40501586 40501606 -126148690 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 894 270 231 0 0 chrX 40502008 40502073 -126148223 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 894 303 38 18 36 chrX 40502522 40502577 -126147719 + (CAATT)n Simple_repeat Simple_repeat 5 58 0 5 894 1303 77 11 11 chrX 40503397 40503580 -126146716 + B2_Mm2 SINE B2 5 187 -8 6 894 1151 62 0 7 chrX 40503813 40503960 -126146336 + B1_Mm SINE Alu 2 147 0 7 894 256 108 30 30 chrX 40503963 40504030 -126146266 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 8 894 216 302 0 16 chrX 40504679 40504743 -126145553 - L2a LINE L2 0 3426 3364 9 894 546 91 0 0 chrX 40505929 40506006 -126144290 + (A)n Simple_repeat Simple_repeat 1 77 0 1 894 236 303 53 44 chrX 40507537 40507651 -126142645 + Charlie4z DNA MER1_type 35 149 -18 1 894 2406 85 12 6 chrX 40508151 40508484 -126141812 - L1_Mus3 LINE L1 -191 6447 6113 1 894 1239 78 11 6 chrX 40508484 40508665 -126141631 + L1_Mus3 LINE L1 6455 6636 -2 1 894 426 312 68 44 chrX 40509011 40509259 -126141037 + Lx8 LINE L1 7219 7472 -1 1 894 366 23 0 0 chrX 40509771 40509814 -126140482 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 894 183 42 0 0 chrX 40511724 40511748 -126138548 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1 894 198 342 78 25 chrX 40512552 40512756 -126137540 + L2 LINE L2 2235 2449 -970 1 894 544 319 155 50 chrX 40513099 40513584 -126136712 - Tigger7 DNA MER2_type -4 2487 1953 1 894 301 237 0 13 chrX 40513794 40513871 -126136425 - Lx8 LINE L1 0 7473 7398 1 894 346 264 22 0 chrX 40513882 40513973 -126136323 - Tigger7 DNA MER2_type -973 1518 1426 1 894 1989 304 63 9 chrX 40514082 40514748 -126135548 - Tigger7 DNA MER2_type -1079 1412 711 1 894 6731 115 24 29 chrX 40514758 40516064 -126134232 - Lx LINE L1 -3 6651 5356 1 894 228 67 0 0 chrX 40516064 40516094 -126134202 + (TTTTC)n Simple_repeat Simple_repeat 1 30 0 2 894 1846 148 210 4 chrX 40516101 40516543 -126133753 - Lx LINE L1 -7 6647 6115 2 894 2409 185 2 2 chrX 40516540 40516990 -126133306 - L1_Mur2 LINE L1 -559 5318 4869 2 894 1614 318 44 10 chrX 40516993 40517581 -126132715 - Tigger7 DNA MER2_type -1799 692 85 1 894 477 0 0 0 chrX 40517581 40517634 -126132662 + (TTTTC)n Simple_repeat Simple_repeat 3 55 0 2 894 333 0 0 0 chrX 40517634 40517670 -126132626 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 894 1393 58 0 0 chrX 40517867 40518038 -126132258 - L1Md_A LINE L1 -295 6287 6117 2 894 2879 3 0 0 chrX 40518038 40518360 -126131936 + L1Md_A LINE L1 6261 6582 0 2 894 246 391 0 0 chrX 40519295 40519364 -126130932 + tRNA-Ala-GCG tRNA tRNA 1 69 -6 2 894 424 309 89 38 chrX 40519848 40520006 -126130290 - MER5A DNA MER1_type -23 166 1 2 894 198 71 0 0 chrX 40521891 40521919 -126128377 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2 894 291 304 103 8 chrX 40522075 40522201 -126128095 - B1F SINE Alu -9 140 3 2 894 494 176 48 0 chrX 40522746 40522871 -126127425 - Lx9 LINE L1 -1 7643 7513 3 894 300 366 0 9 chrX 40522988 40523101 -126127195 + L2 LINE L2 2353 2464 -955 3 894 394 337 83 20 chrX 40523122 40523376 -126126920 + L2 LINE L2 2548 2817 -602 3 894 1016 95 0 0 chrX 40523401 40523538 -126126758 + B1_Mus1 SINE Alu 3 139 -9 3 894 246 32 0 0 chrX 40523552 40523583 -126126713 + (GAAAA)n Simple_repeat Simple_repeat 5 35 0 3 894 1914 183 25 31 chrX 40523583 40523943 -126126353 + ORR1C1 LTR MaLR 19 376 -2 3 894 310 349 135 5 chrX 40523950 40524143 -126126153 + L2 LINE L2 2822 3039 -380 3 894 333 0 0 0 chrX 40524392 40524429 -126125867 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 894 214 186 0 0 chrX 40525104 40525147 -126125149 + T-rich Low_complexity Low_complexity 1 43 0 3 894 223 316 89 38 chrX 40525545 40525624 -126124672 + MIR3 SINE MIR 110 192 -16 3 894 688 168 55 27 chrX 40525905 40526125 -126124171 - Lx9 LINE L1 -3 7641 7416 3 894 252 307 0 0 chrX 40526656 40526731 -126123565 - L1M5 LINE L1 -332 5792 5718 3 894 270 0 0 0 chrX 40528297 40528327 -126121969 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 894 232 253 98 11 chrX 40529553 40529655 -126120641 - MIRb SINE MIR -38 224 112 4 894 8049 33 2 3 chrX 40529656 40530620 -126119676 - L1Md_F2 LINE L1 -1 6581 5619 4 894 20719 65 0 3 chrX 40530618 40533313 -126116983 + L1Md_F2 LINE L1 2941 5627 -256 4 894 225 273 45 0 chrX 40533764 40533830 -126116466 - L1MB5 LINE L1 -207 5967 5899 4 894 545 250 57 17 chrX 40534076 40534251 -126116045 + Lx9 LINE L1 6804 6985 -659 4 894 774 169 22 0 chrX 40534267 40534403 -126115893 - B1_Mur4 SINE Alu -1 149 11 4 894 410 343 34 99 chrX 40534273 40534506 -126115790 - B4 SINE B4 -73 219 2 4 894 248 262 82 12 chrX 40534510 40534595 -126115701 - L1MB5 LINE L1 -274 5904 5814 4 894 292 277 63 52 chrX 40534653 40534954 -126115342 - L1M4b LINE L1 -5146 1956 1610 4 894 1118 216 126 14 chrX 40535085 40535214 -126115082 + ORR1D1 LTR MaLR 37 162 -212 4 894 198 0 0 0 chrX 40535214 40535236 -126115060 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 894 1118 216 126 14 chrX 40535236 40535392 -126114904 + ORR1D1 LTR MaLR 163 353 -21 4 894 246 266 108 79 chrX 40535916 40536081 -126114215 - MIR3 SINE MIR -87 175 2 5 894 236 100 0 24 chrX 40537229 40537270 -126113026 + (TCTCCC)n Simple_repeat Simple_repeat 6 45 0 5 894 325 328 154 50 chrX 40537294 40537554 -126112742 - B4 SINE B4 -1 291 5 5 894 1518 207 64 14 chrX 40538318 40538739 -126111557 + RMER10A LTR ERVL 1 442 0 5 894 5003 165 34 19 chrX 40539287 40540250 -126110046 - Lx2 LINE L1 0 6997 6020 5 894 491 63 0 0 chrX 40540251 40540314 -126109982 - L1_Mus2 LINE L1 -105 6461 6399 5 894 231 200 0 0 chrX 40541184 40541234 -126109062 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 5 894 23 33 0 0 chrX 40541558 40541588 -126108708 + AT_rich Low_complexity Low_complexity 1 30 0 5 894 372 22 0 0 chrX 40541628 40541673 -126108623 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 894 22 56 0 0 chrX 40542693 40542729 -126107567 + AT_rich Low_complexity Low_complexity 1 36 0 5 894 1142 181 116 107 chrX 40542902 40543212 -126107084 + RLTR23 LTR ERV1 1 313 -117 6 894 2218 259 44 44 chrX 40543253 40544018 -126106278 + L1_Mur3 LINE L1 564 1328 -6384 6 894 3128 128 39 35 chrX 40544026 40544600 -126105696 + ORR1A3-int LTR MaLR 573 1698 -265 6 894 469 255 10 0 chrX 40544600 40544702 -126105594 + Lx9 LINE L1 7081 7183 -461 6 894 245 51 0 25 chrX 40544710 40544750 -126105546 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 6 894 581 327 30 4 chrX 40544761 40545025 -126105271 + Lx9 LINE L1 7196 7466 -178 6 894 182 321 31 118 chrX 40545396 40545523 -126104773 + L2a LINE L2 3309 3424 -2 6 894 234 0 0 0 chrX 40546595 40546621 -126103675 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 894 351 98 0 0 chrX 40546621 40546682 -126103614 + (GA)n Simple_repeat Simple_repeat 1 61 0 6 894 345 47 0 0 chrX 40547216 40547259 -126103037 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 6 894 260 291 45 34 chrX 40547326 40547415 -126102881 + MTEa LTR MaLR 290 379 0 6 894 22 0 0 0 chrX 40548188 40548210 -126102086 + AT_rich Low_complexity Low_complexity 1 22 0 7 894 272 307 39 19 chrX 40549338 40549441 -126100855 - MTE2b LTR MaLR -109 270 166 7 894 214 29 57 0 chrX 40549479 40549514 -126100782 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 7 894 3170 228 90 36 chrX 40552153 40552986 -126097310 + Lx7 LINE L1 6703 7577 -119 7 894 372 22 0 0 chrX 40552986 40553031 -126097265 + (GA)n Simple_repeat Simple_repeat 1 45 0 7 894 3170 228 90 36 chrX 40553031 40553140 -126097156 + Lx7 LINE L1 7578 7695 -1 7 894 24 32 0 0 chrX 40553140 40553171 -126097125 + AT_rich Low_complexity Low_complexity 1 31 0 7 894 243 0 0 0 chrX 40553377 40553404 -126096892 + (TA)n Simple_repeat Simple_repeat 2 28 0 7 894 549 0 0 0 chrX 40553661 40553722 -126096574 + (TC)n Simple_repeat Simple_repeat 1 61 0 7 894 21 0 0 0 chrX 40555071 40555092 -126095204 + AT_rich Low_complexity Low_complexity 1 21 0 7 894 279 0 0 0 chrX 40556475 40556506 -126093790 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 894 237 238 11 111 chrX 40556666 40556756 -126093540 + MLT1A1 LTR MaLR 300 380 -28 8 894 400 346 43 25 chrX 40557334 40557497 -126092799 + B4A SINE B4 86 251 -41 8 894 285 29 0 0 chrX 40557540 40557574 -126092722 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 894 351 0 0 0 chrX 40557574 40557612 -126092684 + (GA)n Simple_repeat Simple_repeat 2 40 0 8 894 718 124 0 9 chrX 40558861 40558959 -126091337 + L1_Mm LINE L1 5490 5587 -296 8 894 7960 47 13 2 chrX 40558959 40559943 -126090353 + L1Md_F2 LINE L1 5588 6582 0 8 894 36 23 0 0 chrX 40561808 40561851 -126088445 + AT_rich Low_complexity Low_complexity 1 43 0 8 894 254 229 129 0 chrX 40561889 40561959 -126088337 - B3 SINE B2 0 216 138 8 894 35449 35 1 0 chrX 40561972 40567841 -126082455 + L1Md_T LINE L1 1 5589 -297 8 894 8935 8 0 0 chrX 40567841 40568837 -126081459 + L1Md_T LINE L1 5590 6585 0 8 894 22 56 0 0 chrX 40568841 40568877 -126081419 + AT_rich Low_complexity Low_complexity 1 36 0 8 894 25 0 0 0 chrX 40569412 40569437 -126080859 + AT_rich Low_complexity Low_complexity 1 25 0 9 894 240 59 0 0 chrX 40569441 40569475 -126080821 + (TG)n Simple_repeat Simple_repeat 1 34 0 9 894 565 344 12 54 chrX 40569503 40569743 -126080553 - B4A SINE B4 -58 234 5 9 894 242 268 115 9 chrX 40569773 40569886 -126080410 - MER53 DNA hAT -67 126 2 9 894 564 281 107 34 chrX 40570348 40570816 -126079480 + L1MA6 LINE L1 5797 6298 -2 9 894 38 81 0 0 chrX 40570883 40570970 -126079326 + AT_rich Low_complexity Low_complexity 1 87 0 9 894 393 273 34 0 chrX 40570970 40571058 -126079238 - B1_Mur2 SINE Alu -52 97 7 9 894 286 359 77 15 chrX 40571097 40571227 -126079069 + B4A SINE B4 16 153 -139 9 894 198 156 0 0 chrX 40571275 40571320 -126078976 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 9 894 447 19 0 0 chrX 40571446 40571498 -126078798 + (CA)n Simple_repeat Simple_repeat 2 53 0 9 894 315 0 0 0 chrX 40572766 40572801 -126077495 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1 894 23 33 0 0 chrX 40573955 40573985 -126076311 + AT_rich Low_complexity Low_complexity 1 30 0 1 894 2626 105 5 13 chrX 40574108 40574504 -126075792 + L1_Mus3 LINE L1 6245 6637 -1 1 894 31 0 0 0 chrX 40574594 40574625 -126075671 + AT_rich Low_complexity Low_complexity 1 31 0 1 894 7113 62 50 0 chrX 40574625 40575555 -126074741 - L1_Mus1 LINE L1 0 6567 5592 1 894 233 226 48 19 chrX 40576447 40576551 -126073745 + (TA)n Simple_repeat Simple_repeat 1 107 0 1 894 251 154 0 0 chrX 40576756 40576795 -126073501 - Lx9 LINE L1 -1262 6382 6344 1 894 3924 223 108 16 chrX 40576796 40577188 -126073108 + Lx9 LINE L1 6392 6814 -830 1 894 216 0 0 0 chrX 40577188 40577212 -126073084 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 894 3924 223 108 16 chrX 40577212 40577795 -126072501 + Lx9 LINE L1 6815 7456 -188 1 894 687 128 0 0 chrX 40577795 40577904 -126072392 + (TA)n Simple_repeat Simple_repeat 1 109 0 1 894 342 0 0 0 chrX 40577904 40577942 -126072354 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 894 267 152 0 0 chrX 40578838 40578884 -126071412 + (TAA)n Simple_repeat Simple_repeat 1 46 0 1 894 41267 4 0 0 chrX 40579052 40585426 -126064870 - L1Md_A LINE L1 0 6582 208 1 894 434 344 120 32 chrX 40585718 40586151 -126064145 + L1M4 LINE L1 4106 4576 -1570 1 894 28 0 0 0 chrX 40586214 40586242 -126064054 + AT_rich Low_complexity Low_complexity 1 28 0 1 894 2695 67 3 6 chrX 40586560 40586918 -126063378 + L1_Mus2 LINE L1 6207 6563 -3 1 894 703 281 70 26 chrX 40587870 40588100 -126062196 + MTE2b LTR MaLR 2 241 -138 1 894 286 309 20 10 chrX 40589879 40589977 -126060319 + MIRb SINE MIR 166 264 -4 1 894 21 36 0 0 chrX 40590089 40590117 -126060179 + AT_rich Low_complexity Low_complexity 1 28 0 1 894 399 367 69 42 chrX 40590308 40590669 -126059627 + Tigger12 DNA MER2_type 8 378 -1581 1 894 807 227 62 5 chrX 40590653 40590848 -126059448 + Tigger12 DNA MER2_type 1759 1958 -1 1 894 1919 229 80 27 chrX 40591756 40591901 -126058395 - Lx7 LINE L1 0 7696 7526 1 894 183 42 0 0 chrX 40591901 40591925 -126058371 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1 894 1919 229 80 27 chrX 40591925 40592294 -126058002 - Lx7 LINE L1 -171 7525 7156 1 894 240 333 12 37 chrX 40593237 40593318 -126056978 - ID SINE ID -141 83 5 1 894 268 57 0 0 chrX 40593383 40593418 -126056878 + U2 snRNA snRNA 1 35 -153 1 894 245 242 43 32 chrX 40593462 40593556 -126056740 - L1MA5A LINE L1 -125 6175 6081 1 894 304 309 129 0 chrX 40593570 40593748 -126056548 - L1MA5A LINE L1 -286 6011 5811 1 894 226 229 0 0 chrX 40594028 40594076 -126056220 + MIR SINE MIR 112 159 -103 1 894 375 23 0 0 chrX 40594211 40594255 -126056041 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 894 235 125 39 77 chrX 40595195 40595273 -126055023 + Lx9 LINE L1 7440 7514 -130 1 894 27 49 0 0 chrX 40595280 40595321 -126054975 + AT_rich Low_complexity Low_complexity 1 41 0 1 894 414 0 0 0 chrX 40595343 40595389 -126054907 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 894 214 200 0 0 chrX 40596416 40596456 -126053840 + L3b LINE CR1 435 474 -8 1 894 24 0 0 0 chrX 40597904 40597928 -126052368 + AT_rich Low_complexity Low_complexity 1 24 0 1 894 1918 100 42 42 chrX 40598101 40598414 -126051882 - Lx2 LINE L1 -14 6983 6671 1 894 4236 157 40 12 chrX 40599371 40600120 -126050176 + Lx4A LINE L1 6285 7054 -4 1 894 209 139 47 0 chrX 40601582 40601625 -126048671 + CT-rich Low_complexity Low_complexity 2 46 0 1 894 238 293 40 24 chrX 40602336 40602462 -126047834 + L1MB8 LINE L1 6027 6154 -24 1 894 344 250 19 0 chrX 40602739 40602847 -126047449 - L1MB5 LINE L1 -17 6167 6058 1 894 669 277 168 30 chrX 40602862 40603469 -126046827 - L1MB5 LINE L1 -170 6004 5317 1 894 249 197 33 0 chrX 40603506 40603567 -126046729 - L1MB5 LINE L1 -905 5241 5179 1 894 22 0 0 0 chrX 40604209 40604231 -126046065 + AT_rich Low_complexity Low_complexity 1 22 0 1 894 409 282 48 0 chrX 40604453 40604556 -126045740 - PB1D10 SINE Alu -9 108 1 1 894 987 105 23 11 chrX 40604841 40605015 -126045281 - L1Md_F2 LINE L1 -5 6577 6402 1 894 8906 107 13 14 chrX 40605351 40606671 -126043625 + Lx3B LINE L1 5654 6972 -1 1 894 22 35 0 0 chrX 40606974 40607003 -126043293 + AT_rich Low_complexity Low_complexity 1 29 0 1 894 1227 130 5 0 chrX 40607222 40607406 -126042890 + U2 snRNA snRNA 1 185 -3 1 894 252 246 34 34 chrX 40608213 40608272 -126042024 - MER20 DNA MER1_type -159 60 2 1 894 183 453 25 35 chrX 40608290 40608576 -126041720 + L2b LINE L2 3072 3354 -21 1 894 980 291 35 35 chrX 40608625 40608910 -126041386 - B4A SINE B4 -2 290 6 1 894 240 273 97 39 chrX 40609985 40610088 -126040208 - MIR SINE MIR -89 173 65 1 894 586 252 34 27 chrX 40610347 40610494 -126039802 - B1_Mur1 SINE Alu 0 149 2 1 894 499 167 0 0 chrX 40610943 40611033 -126039263 - 4.5SRNA scRNA scRNA -3 91 2 1 894 2071 113 24 30 chrX 40611033 40611369 -126038927 + Lx LINE L1 6314 6647 -7 1 894 217 237 0 0 chrX 40611399 40611458 -126038838 + A-rich Low_complexity Low_complexity 1 59 0 1 894 215 337 11 0 chrX 40611878 40611970 -126038326 + GA-rich Low_complexity Low_complexity 2 94 0 1 894 371 373 73 42 chrX 40612272 40612655 -126037641 + MARNA DNA Mariner 136 530 -56 1 894 756 107 0 0 chrX 40612660 40612772 -126037524 + (TA)n Simple_repeat Simple_repeat 2 113 0 1 894 24 67 0 0 chrX 40612858 40612903 -126037393 + AT_rich Low_complexity Low_complexity 1 45 0 1 894 22 0 0 0 chrX 40612918 40612940 -126037356 + AT_rich Low_complexity Low_complexity 1 22 0 1 894 1300 128 0 0 chrX 40613005 40613200 -126037096 + B2_Mm2 SINE B2 1 195 0 1 894 265 253 132 5 chrX 40614083 40614301 -126035995 + L1M5 LINE L1 5636 5880 -2002 1 894 278 211 57 128 chrX 40614932 40615073 -126035223 - Lx4B LINE L1 0 7058 6928 1 894 282 288 19 9 chrX 40615343 40615448 -126034848 - L1MB4 LINE L1 -247 5933 5828 1 894 24 32 0 0 chrX 40615489 40615520 -126034776 + AT_rich Low_complexity Low_complexity 1 31 0 1 894 31 68 0 0 chrX 40615824 40615883 -126034413 + AT_rich Low_complexity Low_complexity 1 59 0 1 894 885 319 84 6 chrX 40616041 40616385 -126033911 - Lx8 LINE L1 -99 7374 7004 1 894 1160 224 130 24 chrX 40616401 40616739 -126033557 + ORR1D1 LTR MaLR 1 374 0 1 894 1235 239 75 15 chrX 40616925 40617257 -126033039 + MLT2D LTR ERVL 2 353 -61 1 894 754 336 12 87 chrX 40617313 40617636 -126032660 + MTEa LTR MaLR 1 299 -80 1 894 206 32 0 31 chrX 40617679 40617711 -126032585 + (CAAA)n Simple_repeat Simple_repeat 3 33 0 1 894 228 67 0 0 chrX 40617711 40617741 -126032555 + MLT2D LTR ERVL 529 558 -2 1 894 23 0 0 0 chrX 40617999 40618022 -126032274 + AT_rich Low_complexity Low_complexity 1 23 0 1 894 200 190 25 25 chrX 40618477 40618558 -126031738 + (CATA)n Simple_repeat Simple_repeat 4 84 0 1 894 288 0 0 0 chrX 40618805 40618837 -126031459 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 894 396 0 0 0 chrX 40619386 40619430 -126030866 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 894 275 408 61 35 chrX 40619800 40620031 -126030265 + MIR SINE MIR 7 243 -19 1 894 195 363 102 7 chrX 40620537 40620684 -126029612 + L3 LINE CR1 3225 3385 -1104 1 894 3387 87 6 14 chrX 40621135 40621626 -126028670 - L1_Mus1 LINE L1 0 6567 6081 1 894 6853 81 6 1 chrX 40621627 40622807 -126027489 + L1_Mus1 LINE L1 4893 6076 -491 1 894 2266 78 7 7 chrX 40622863 40623182 -126027114 + ORR1A2 LTR MaLR 14 377 -2 1 894 441 0 0 0 chrX 40623203 40623252 -126027044 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1 894 243 103 0 0 chrX 40624678 40624717 -126025579 + (TTTTG)n Simple_repeat Simple_repeat 5 43 0 1 894 248 70 23 0 chrX 40625307 40625350 -126024946 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1 894 229 324 0 14 chrX 40627390 40627462 -126022834 + PB1D7 SINE Alu 42 112 -8 1 894 238 374 48 0 chrX 40628949 40629032 -126021264 + MTE2b LTR MaLR 1 87 -292 1 894 26 0 0 0 chrX 40629046 40629072 -126021224 + AT_rich Low_complexity Low_complexity 1 26 0 1 894 1146 263 47 0 chrX 40629117 40629391 -126020905 + MTE2b LTR MaLR 90 376 -3 1 894 684 275 117 13 chrX 40629865 40630203 -126020093 + MTE2a LTR MaLR 25 417 -2 1 894 935 201 96 8 chrX 40630218 40630469 -126019827 - Lx9 LINE L1 0 7644 7372 1 894 447 305 81 26 chrX 40630486 40630762 -126019534 - L1ME1 LINE L1 -37 6141 5851 1 894 499 276 139 3 chrX 40631503 40631656 -126018640 + ID_B1 SINE B4 44 211 -13 1 894 552 30 0 0 chrX 40631705 40631771 -126018525 + (TA)n Simple_repeat Simple_repeat 1 66 0 1 895 191 329 75 91 chrX 40633029 40633216 -126017080 + L3 LINE CR1 3533 3716 -773 1 895 22 0 0 0 chrX 40634167 40634189 -126016107 + AT_rich Low_complexity Low_complexity 1 22 0 1 895 9596 84 1 1 chrX 40634203 40634655 -126015641 + Lx3_Mus LINE L1 5459 5907 -1102 1 895 255 61 0 0 chrX 40634655 40634688 -126015608 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 1 895 9596 91 27 11 chrX 40634688 40634918 -126015378 + Lx3_Mus LINE L1 5908 6151 -858 1 895 3962 78 2 6 chrX 40634918 40635462 -126014834 + L1Md_F2 LINE L1 6039 6580 -2 1 895 9596 91 27 11 chrX 40635462 40636297 -126013999 + Lx3_Mus LINE L1 6152 6995 -14 1 895 3225 87 0 11 chrX 40636300 40636753 -126013543 + L1Md_F2 LINE L1 6121 6568 -14 1 895 186 208 0 0 chrX 40636771 40636824 -126013472 + A-rich Low_complexity Low_complexity 1 53 0 1 895 449 304 113 5 chrX 40637187 40637372 -126012924 - MIR SINE MIR -56 206 2 1 895 258 106 0 0 chrX 40637384 40637431 -126012865 + (TCCA)n Simple_repeat Simple_repeat 3 49 0 1 895 490 219 18 0 chrX 40638354 40638468 -126011828 + MER5A1 DNA MER1_type 51 166 0 1 895 444 287 0 0 chrX 40639160 40639268 -126011028 - RSINE1 SINE B4 -57 108 1 1 895 5425 140 65 11 chrX 40639718 40640657 -126009639 - L1Md_F2 LINE L1 0 6582 5601 1 895 258 324 144 63 chrX 40640714 40641047 -126009249 + L2 LINE L2 2382 2741 -678 1 895 796 96 0 17 chrX 40641382 40641516 -126008780 - B1_Mus1 SINE Alu 0 148 16 1 895 23 54 0 0 chrX 40642227 40642264 -126008032 + AT_rich Low_complexity Low_complexity 1 37 0 1 895 246 95 0 0 chrX 40642377 40642419 -126007877 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 2 895 258 106 0 0 chrX 40642421 40642468 -126007828 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 895 1100 72 0 0 chrX 40644468 40644606 -126005690 + B1_Mm SINE Alu 1 138 -9 2 895 423 0 0 0 chrX 40644606 40644653 -126005643 + (CAA)n Simple_repeat Simple_repeat 2 48 0 2 895 231 315 77 23 chrX 40646047 40646177 -126004119 + L1MC3 LINE L1 6798 6934 -851 2 895 449 276 14 7 chrX 40646266 40646408 -126003888 + Lx2 LINE L1 673 815 -5801 2 895 12899 122 21 26 chrX 40646456 40649071 -126001225 + Lx2 LINE L1 677 3374 -2512 2 895 3567 110 4 116 chrX 40649071 40649761 -126000535 + L1_Mus2 LINE L1 5952 6564 -2 2 895 11069 179 86 22 chrX 40649761 40650079 -126000217 + Lx2 LINE L1 3375 3766 -2120 2 895 6604 101 9 31 chrX 40650076 40651378 -125998918 + L1_Mus2 LINE L1 5293 6565 -1 2 895 824 292 139 36 chrX 40651892 40652534 -125997762 + L1MC3 LINE L1 6987 7694 -91 2 895 1759 96 4 0 chrX 40652586 40652826 -125997470 + L1_Mus1 LINE L1 5976 6216 -351 2 895 571 339 24 41 chrX 40652949 40653241 -125997055 + B4A SINE B4 2 288 -4 2 895 206 231 19 0 chrX 40653266 40653318 -125996978 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 895 555 165 19 0 chrX 40653665 40653768 -125996528 - Lx2 LINE L1 -842 5044 4940 2 895 6967 161 64 12 chrX 40653746 40655623 -125994673 + Lx2 LINE L1 5001 6979 -18 2 895 997 67 59 0 chrX 40655623 40655758 -125994538 + B1_Mm SINE Alu 2 144 -3 2 895 3574 43 2 5 chrX 40657176 40657624 -125992672 - L1Md_F2 LINE L1 -2 6580 6134 2 895 306 0 0 0 chrX 40657758 40657792 -125992504 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 895 357 43 0 0 chrX 40657792 40657838 -125992458 + (TC)n Simple_repeat Simple_repeat 1 47 0 2 895 369 0 0 0 chrX 40657838 40657878 -125992418 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 895 181 57 28 28 chrX 40657889 40657925 -125992371 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 2 895 21 57 0 0 chrX 40660267 40660302 -125989994 + AT_rich Low_complexity Low_complexity 1 35 0 2 895 325 365 58 37 chrX 40660822 40661082 -125989214 - MIRm SINE MIR -11 257 2 2 895 216 158 0 0 chrX 40662011 40662049 -125988247 + GA-rich Low_complexity Low_complexity 3 40 0 2 895 1251 94 0 0 chrX 40662049 40662229 -125988067 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 895 559 342 98 11 chrX 40663095 40663361 -125986935 + RMER15 LTR ERVL 273 561 -14 2 895 278 360 35 0 chrX 40663414 40663500 -125986796 + PB1D10 SINE Alu 1 89 -28 2 895 252 86 0 0 chrX 40666448 40666483 -125983813 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 895 351 0 0 0 chrX 40667064 40667103 -125983193 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 895 7964 50 0 3 chrX 40667127 40668309 -125981987 - L1Md_F2 LINE L1 -2 6580 5404 2 895 771 321 91 0 chrX 40668332 40668575 -125981721 + B4A SINE B4 14 278 -14 2 895 594 0 0 0 chrX 40668576 40668642 -125981654 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 895 572 295 78 20 chrX 40668900 40669104 -125981192 + MTD LTR MaLR 10 225 -194 2 895 2661 242 180 56 chrX 40669128 40670224 -125980072 + MTC-int LTR MaLR 26 1257 -1 2 895 325 283 39 29 chrX 40670252 40670354 -125979942 + MTD LTR MaLR 41 143 -276 2 895 807 122 0 0 chrX 40672065 40672180 -125978116 + B2_Mm2 SINE B2 1 115 -80 2 895 591 40 0 0 chrX 40672301 40672372 -125977924 + B1_Mus2 SINE Alu 68 138 -9 2 895 306 0 0 0 chrX 40672372 40672406 -125977890 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 895 25 31 0 0 chrX 40672416 40672448 -125977848 + AT_rich Low_complexity Low_complexity 1 32 0 2 895 1030 306 27 53 chrX 40672651 40673027 -125977269 + ORR1D2 LTR MaLR 5 370 0 2 895 3042 76 5 7 chrX 40673678 40674104 -125976192 + L1_Mus3 LINE L1 6211 6635 -3 2 895 528 278 144 0 chrX 40674125 40674312 -125975984 + B3 SINE B2 3 216 0 2 895 273 118 0 0 chrX 40675176 40675227 -125975069 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 895 249 363 102 27 chrX 40676379 40676566 -125973730 + L2c LINE L2 3049 3249 -138 2 895 291 173 40 13 chrX 40677131 40677207 -125973089 + (TA)n Simple_repeat Simple_repeat 2 79 0 2 895 488 361 0 0 chrX 40677614 40677744 -125972552 + RSINE1 SINE B4 10 139 -26 2 895 3760 88 13 6 chrX 40678172 40678711 -125971585 - L1_Mus4 LINE L1 -5 6631 6089 2 895 233 333 182 0 chrX 40678736 40678901 -125971395 + MIRb SINE MIR 63 257 -11 2 895 342 0 0 0 chrX 40679225 40679263 -125971033 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 895 417 123 0 0 chrX 40679791 40679856 -125970440 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 895 259 343 79 16 chrX 40679976 40680168 -125970128 - MIR SINE MIR -49 213 8 2 895 201 154 0 0 chrX 40680184 40680223 -125970073 + GA-rich Low_complexity Low_complexity 4 42 0 2 895 282 29 0 0 chrX 40680247 40680282 -125970014 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2 895 1207 48 0 0 chrX 40680283 40680429 -125969867 - B1_Mm SINE Alu -1 146 1 2 895 250 327 109 0 chrX 40680633 40680743 -125969553 + L2a LINE L2 3304 3425 -1 2 895 236 360 94 26 chrX 40681019 40681253 -125969043 - MIR SINE MIR -10 252 3 2 895 30 45 0 0 chrX 40681522 40681566 -125968730 + AT_rich Low_complexity Low_complexity 1 44 0 2 895 394 391 33 7 chrX 40681589 40681741 -125968555 + RSINE1 SINE B4 6 161 -4 2 895 327 289 135 29 chrX 40682068 40682349 -125967947 + L1ME1 LINE L1 4409 4719 -1427 2 895 288 275 12 24 chrX 40682386 40682468 -125967828 - B1_Mus1 SINE Alu -47 101 21 2 895 589 286 78 54 chrX 40682496 40683077 -125967219 + L1ME1 LINE L1 4723 5320 -826 2 895 1629 49 10 0 chrX 40683077 40683282 -125967014 + L1Md_T LINE L1 6364 6570 -12 2 895 566 293 75 60 chrX 40683282 40683354 -125966942 + L1ME1 LINE L1 5321 5392 -754 2 895 769 200 0 7 chrX 40683383 40683524 -125966772 + B1_Mur3 SINE Alu 3 142 -7 2 895 235 65 21 21 chrX 40683539 40683586 -125966710 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 895 474 231 27 40 chrX 40683785 40683934 -125966362 + Lx2B LINE L1 6854 7000 0 2 895 1030 136 0 0 chrX 40683949 40684096 -125966200 + B1_Mur3 SINE Alu 1 147 -2 2 895 275 302 69 46 chrX 40684195 40684499 -125965797 + L1ME1 LINE L1 5872 6176 -3 2 895 223 341 31 41 chrX 40686446 40686621 -125963675 + MIRb SINE MIR 28 194 -68 2 895 27 0 0 0 chrX 40686677 40686704 -125963592 + AT_rich Low_complexity Low_complexity 1 27 0 2 895 1124 82 0 0 chrX 40688156 40688303 -125961993 + B1_Mus1 SINE Alu 2 148 0 2 895 626 164 8 0 chrX 40688303 40688425 -125961871 + GA-rich Low_complexity Low_complexity 2 124 0 2 895 4021 135 11 137 chrX 40690979 40691663 -125958633 - RMER17A2 LTR ERVK -65 841 271 2 895 7141 1 0 0 chrX 40691663 40692450 -125957846 - L1Md_A LINE L1 0 6582 5796 2 895 4021 135 11 137 chrX 40692450 40692727 -125957569 - RMER17A2 LTR ERVK -636 270 1 2 895 228 336 158 38 chrX 40692940 40692972 -125957324 + MLT1J2 LTR MaLR 179 214 -234 2 895 1742 189 82 6 chrX 40692972 40693338 -125956958 + ORR1B1 LTR MaLR 1 394 0 2 895 228 336 158 38 chrX 40693338 40693438 -125956858 + MLT1J2 LTR MaLR 215 327 -121 2 895 249 235 187 32 chrX 40693603 40693726 -125956570 + MLT1B LTR MaLR 1 142 -248 2 895 3919 98 40 3 chrX 40695240 40695815 -125954481 - Lx3_Mus LINE L1 -8 7001 6406 2 895 3543 67 2 0 chrX 40695816 40696264 -125954032 + L1_Mur1 LINE L1 5390 5838 -48 2 895 2207 212 26 7 chrX 40696418 40696870 -125953426 - Lx7 LINE L1 -417 7279 6819 2 895 21 0 0 0 chrX 40697194 40697215 -125953081 + AT_rich Low_complexity Low_complexity 1 21 0 2 895 209 348 111 47 chrX 40697270 40697344 -125952952 - L2a LINE L2 0 3426 3334 2 895 213 39 0 0 chrX 40697344 40697370 -125952926 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 895 209 348 111 47 chrX 40697370 40697485 -125952811 - L2a LINE L2 -93 3333 3226 2 895 304 83 0 0 chrX 40697974 40698022 -125952274 + Lx LINE L1 6595 6642 -12 2 895 1228 239 116 55 chrX 40698091 40698512 -125951784 + MT2B LTR ERVL 20 540 -61 2 895 450 0 0 0 chrX 40698512 40698562 -125951734 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 895 1228 199 87 48 chrX 40698562 40698608 -125951688 + MT2B LTR ERVL 541 600 -1 2 895 1456 320 50 42 chrX 40700120 40700210 -125950086 + Lx7 LINE L1 6080 6194 -1502 2 895 231 36 0 0 chrX 40700210 40700238 -125950058 + (TAGA)n Simple_repeat Simple_repeat 1 28 0 2 895 1456 320 50 42 chrX 40700238 40700769 -125949527 + Lx7 LINE L1 6195 6706 -990 2 895 229 313 0 0 chrX 40702076 40702143 -125948153 - Lx7 LINE L1 -671 7025 6959 2 895 28 48 0 0 chrX 40702143 40702185 -125948111 + AT_rich Low_complexity Low_complexity 1 42 0 2 895 312 218 0 0 chrX 40702186 40702241 -125948055 - Lx8 LINE L1 -697 6776 6722 2 895 1072 253 109 66 chrX 40702295 40702642 -125947654 + ORR1D1 LTR MaLR 13 374 0 2 895 360 0 0 0 chrX 40702651 40702691 -125947605 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 895 408 20 0 0 chrX 40702691 40702739 -125947557 + (GA)n Simple_repeat Simple_repeat 1 49 0 2 895 1250 328 23 21 chrX 40702747 40703223 -125947073 - Lx8 LINE L1 -793 6680 6204 2 895 245 243 45 72 chrX 40703275 40703386 -125946910 + Lx7 LINE L1 6078 6185 -1511 2 895 811 265 18 28 chrX 40703638 40703855 -125946441 - B3 SINE B2 0 216 2 2 895 276 353 31 18 chrX 40704314 40704431 -125945865 - MIRb SINE MIR -143 133 14 2 895 410 274 29 0 chrX 40704657 40704759 -125945537 + MIRb SINE MIR 152 256 -12 2 895 233 320 126 0 chrX 40706516 40706619 -125943677 - L2a LINE L2 -2 3424 3309 2 895 237 33 0 0 chrX 40707024 40707054 -125943242 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2 895 264 239 117 25 chrX 40708507 40708627 -125941669 + L1M1 LINE L1 5559 5689 -611 2 895 338 206 0 27 chrX 40708686 40708761 -125941535 + L1_Rod LINE L1 5765 5837 -10 2 895 945 90 0 0 chrX 40709052 40709185 -125941111 + (GAAA)n Simple_repeat Simple_repeat 3 135 0 2 895 390 200 43 0 chrX 40710247 40710362 -125939934 + Lx9 LINE L1 7512 7631 -13 2 895 516 254 37 0 chrX 40710509 40710643 -125939653 + Lx7 LINE L1 7135 7273 -423 2 895 4063 4 0 0 chrX 40710716 40711167 -125939129 + L1Md_T LINE L1 6132 6582 0 2 895 23 86 0 0 chrX 40711483 40711541 -125938755 + AT_rich Low_complexity Low_complexity 1 58 0 3 895 315 130 0 0 chrX 40711688 40711742 -125938554 + (T)n Simple_repeat Simple_repeat 1 54 0 3 895 24 32 0 0 chrX 40711817 40711848 -125938448 + AT_rich Low_complexity Low_complexity 1 31 0 3 895 3098 234 103 24 chrX 40712103 40713241 -125937055 + Lx9 LINE L1 4846 6088 -1556 3 895 565 278 100 0 chrX 40713316 40713488 -125936808 + Lx9 LINE L1 6226 6554 -1090 3 895 203 114 23 0 chrX 40713524 40713568 -125936728 + (TTTTTA)n Simple_repeat Simple_repeat 5 49 0 3 895 7786 58 5 4 chrX 40713604 40714618 -125935678 - L1Md_F2 LINE L1 -14 6568 5558 3 895 3323 41 5 0 chrX 40714618 40715012 -125935284 + MTA_Mm LTR MaLR 1 396 0 3 895 8378 64 8 2 chrX 40715012 40716103 -125934193 + MTA_Mm-int LTR MaLR 1 1098 0 3 895 3031 30 2 152 chrX 40716103 40716569 -125933727 + MTA_Mm LTR MaLR 1 396 0 3 895 3563 60 0 18 chrX 40716569 40716693 -125933603 - L1Md_F2 LINE L1 -326 5557 5436 3 895 2122 271 102 54 chrX 40716785 40717717 -125932579 + Lx9 LINE L1 6648 7624 -20 3 895 1221 89 0 0 chrX 40717717 40717886 -125932410 + L1_Mus2 LINE L1 6397 6565 -1 3 895 24 0 0 0 chrX 40717890 40717914 -125932382 + AT_rich Low_complexity Low_complexity 1 24 0 3 895 309 269 74 37 chrX 40718142 40718153 -125932143 - ID_B1 SINE B4 -4 220 109 3 895 409 278 0 0 chrX 40718153 40718250 -125932046 - B1F SINE Alu -25 124 28 3 895 281 169 0 63 chrX 40718514 40718577 -125931719 + RMER15 LTR ERVL 422 480 -95 3 895 1649 202 89 14 chrX 40718568 40718939 -125931357 - MTD LTR MaLR -8 411 13 3 895 781 264 108 55 chrX 40719651 40720031 -125930265 + RMER20B LTR ERVK 129 589 -38 3 895 440 193 9 0 chrX 40720359 40720468 -125929828 + CT-rich Low_complexity Low_complexity 4 113 0 3 895 180 111 0 0 chrX 40720551 40720578 -125929718 + (TCC)n Simple_repeat Simple_repeat 1 27 0 3 895 417 324 0 60 chrX 40720602 40720753 -125929543 - ID_B1 SINE B4 -3 221 80 3 895 183 129 0 61 chrX 40721291 40721357 -125928939 + A-rich Low_complexity Low_complexity 2 63 0 3 895 333 0 0 0 chrX 40721369 40721406 -125928890 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 895 1831 265 68 25 chrX 40721407 40721979 -125928317 - Lx7 LINE L1 -388 7308 6712 3 895 233 211 0 19 chrX 40722242 40722295 -125928001 + GA-rich Low_complexity Low_complexity 3 54 0 3 895 454 249 128 58 chrX 40722703 40722929 -125927367 - Lx8 LINE L1 -1 7472 7231 3 895 24 53 0 0 chrX 40723300 40723338 -125926958 + AT_rich Low_complexity Low_complexity 1 38 0 3 895 303 71 0 0 chrX 40723457 40723499 -125926797 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 3 895 2888 155 80 8 chrX 40723861 40724376 -125925920 + Lx4B LINE L1 6502 7053 -5 3 895 561 314 11 6 chrX 40724599 40724775 -125925521 + MER20 DNA MER1_type 43 219 0 3 895 330 152 0 0 chrX 40725189 40725248 -125925048 + CT-rich Low_complexity Low_complexity 3 61 0 3 895 22 0 0 0 chrX 40725582 40725604 -125924692 + AT_rich Low_complexity Low_complexity 1 22 0 3 895 5775 184 73 16 chrX 40727267 40728464 -125921832 + Lx5 LINE L1 5784 7049 -1 3 895 687 258 111 32 chrX 40728684 40729061 -125921235 - L1MA6 LINE L1 -6 6294 5888 3 895 279 0 0 0 chrX 40729197 40729228 -125921068 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 895 1427 304 37 8 chrX 40729449 40729933 -125920363 - Lx8 LINE L1 -496 6977 6480 3 895 201 299 134 0 chrX 40730436 40730503 -125919793 + MIR3 SINE MIR 114 189 -19 3 895 405 359 23 0 chrX 40731000 40731128 -125919168 + B3 SINE B2 31 161 -55 3 895 728 316 19 31 chrX 40731619 40732040 -125918256 + L1MB7 LINE L1 5429 5844 -340 3 895 327 104 0 0 chrX 40732050 40732098 -125918198 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 3 895 1940 138 31 160 chrX 40732098 40732643 -125917653 + IAPLTR2_Mm LTR ERVK 1 475 0 3 895 1016 92 14 152 chrX 40732644 40732861 -125917435 + IAPEz-int LTR ERVK 9 195 -6286 3 895 227 273 0 0 chrX 40732870 40732914 -125917382 + RLTR27 LTR ERVK 232 275 -34 3 895 3547 67 4 21 chrX 40732917 40733573 -125916723 + IAPEz-int LTR ERVK 94 662 -5819 3 895 2675 87 0 3 chrX 40733573 40733929 -125916367 + IAPEz-int LTR ERVK 1359 1713 -4768 3 895 6776 41 2 17 chrX 40733909 40734752 -125915544 + IAPEz-int LTR ERVK 5651 6481 0 3 895 1916 138 31 160 chrX 40734752 40735296 -125915000 + IAPLTR2_Mm LTR ERVK 1 474 -1 3 895 270 0 0 0 chrX 40735296 40735326 -125914970 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 3 895 226 341 50 37 chrX 40735332 40735630 -125914666 + L1MB7 LINE L1 5867 6168 -11 3 895 594 0 0 0 chrX 40735722 40735788 -125914508 + (TTTTC)n Simple_repeat Simple_repeat 5 70 0 3 895 312 120 0 0 chrX 40735788 40735838 -125914458 + (TTA)n Simple_repeat Simple_repeat 3 52 0 3 895 459 0 0 0 chrX 40736768 40736819 -125913477 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 895 383 216 0 22 chrX 40737447 40737537 -125912759 - Lx4B LINE L1 -17 7041 6954 3 895 751 304 25 16 chrX 40737639 40737956 -125912340 - L1MA7 LINE L1 -284 6007 5688 3 895 270 81 0 0 chrX 40738456 40738493 -125911803 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 895 598 337 33 0 chrX 40738563 40738747 -125911549 - B4 SINE B4 -94 198 9 3 895 348 24 0 0 chrX 40738834 40738875 -125911421 + (CTTA)n Simple_repeat Simple_repeat 3 43 0 3 895 324 0 0 0 chrX 40738999 40739035 -125911261 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 895 770 316 5 5 chrX 40740513 40740729 -125909567 - B3 SINE B2 0 216 1 3 895 298 319 100 0 chrX 40741220 40741380 -125908916 - RMER20B LTR ERVK -269 358 183 3 895 583 326 89 19 chrX 40742695 40742964 -125907332 - B4A SINE B4 -4 288 1 3 895 402 21 0 0 chrX 40743064 40743111 -125907185 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 895 185 378 0 47 chrX 40743170 40743256 -125907040 - MIRc SINE MIR -140 128 47 3 895 241 105 0 66 chrX 40743710 40743771 -125906525 + A-rich Low_complexity Low_complexity 2 58 0 3 895 262 375 19 9 chrX 40743884 40743989 -125906307 + LFSINE_Vert SINE SINE 83 188 -271 3 895 235 306 57 89 chrX 40745016 40745174 -125905122 + RMER15 LTR ERVL 300 452 -123 3 895 211 160 0 39 chrX 40745178 40745199 -125905097 + (CCAA)n Simple_repeat Simple_repeat 2 22 0 3 895 450 0 0 0 chrX 40745199 40745249 -125905047 + (CAAAA)n Simple_repeat Simple_repeat 3 52 0 3 895 211 160 0 39 chrX 40745249 40745279 -125905017 + (CCAA)n Simple_repeat Simple_repeat 3 30 0 3 895 273 288 25 12 chrX 40745318 40745399 -125904897 + RMER15 LTR ERVL 492 573 -2 3 895 205 205 0 0 chrX 40745481 40745520 -125904776 + T-rich Low_complexity Low_complexity 1 39 0 3 895 569 286 106 33 chrX 40745822 40746097 -125904199 + MLT1E1 LTR MaLR 53 347 -307 3 895 519 325 33 23 chrX 40746122 40746336 -125903960 + MLT1E1 LTR MaLR 412 627 0 3 895 2149 60 156 10 chrX 40747426 40747672 -125902624 + ORR1A1 LTR MaLR 1 287 -59 3 895 207 0 0 0 chrX 40747672 40747695 -125902601 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 895 2149 60 156 10 chrX 40747695 40747750 -125902546 + ORR1A1 LTR MaLR 288 346 0 3 895 5909 72 11 1 chrX 40747750 40748582 -125901714 + ORR1A1-int LTR MaLR 1 840 -952 3 895 599 62 206 0 chrX 40748582 40748679 -125901617 - ORR1A1 LTR MaLR -229 117 1 3 895 5808 40 1 1 chrX 40748679 40749403 -125900893 - ORR1A1-int LTR MaLR 0 1792 1069 3 895 1338 34 90 0 chrX 40749417 40749534 -125900762 + ORR1A1 LTR MaLR 153 280 -66 3 895 270 0 0 0 chrX 40749534 40749564 -125900732 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 895 1338 34 90 0 chrX 40749564 40749624 -125900672 + ORR1A1 LTR MaLR 281 344 -2 3 895 1466 247 101 0 chrX 40749743 40750111 -125900185 + MTD LTR MaLR 12 416 -3 3 895 836 304 34 71 chrX 40750291 40750670 -125899626 + MLT1A0 LTR MaLR 1 365 0 3 895 1053 68 0 52 chrX 40750830 40750985 -125899311 + B1_Mus1 SINE Alu 1 147 -1 3 895 208 375 26 35 chrX 40752360 40752476 -125897820 - L2a LINE L2 0 3426 3312 3 895 639 242 161 0 chrX 40752574 40752760 -125897536 - B3 SINE B2 0 216 1 3 895 3376 122 8 0 chrX 40754542 40755060 -125895236 - L1_Mur1 LINE L1 -631 5255 4734 3 895 3392 128 8 6 chrX 40755059 40755587 -125894709 + L1_Mur1 LINE L1 5272 5800 -86 3 895 482 126 46 0 chrX 40755584 40755671 -125894625 + L1_Mm LINE L1 4544 4634 -1249 3 895 2530 21 0 0 chrX 40755651 40755940 -125894356 - L1Md_F2 LINE L1 -663 5919 5631 3 895 5187 43 17 12 chrX 40755940 40756600 -125893696 + L1Md_F2 LINE L1 5908 6570 -12 3 895 7732 61 3 2 chrX 40756600 40757582 -125892714 + L1Md_F2 LINE L1 4604 5585 -298 3 895 7890 44 15 5 chrX 40757583 40758565 -125891731 + L1Md_F2 LINE L1 5587 6578 -4 3 895 6966 138 20 14 chrX 40758575 40759755 -125890541 + Lx3B LINE L1 5783 6969 -4 3 895 484 327 100 35 chrX 40759788 40760048 -125890248 - MLT1D LTR MaLR -91 414 138 3 895 317 193 0 0 chrX 40761124 40761181 -125889115 - LFSINE_Vert SINE SINE -19 440 384 3 895 532 257 25 69 chrX 40761639 40761689 -125888607 - B4A SINE B4 -2 290 246 3 895 1382 198 136 30 chrX 40761689 40762027 -125888269 - ORR1D1 LTR MaLR 0 374 1 3 895 532 296 80 61 chrX 40762027 40762243 -125888053 - B4A SINE B4 -47 245 2 3 895 202 268 212 20 chrX 40762320 40762419 -125887877 - MIR SINE MIR -71 137 20 3 896 22 35 0 0 chrX 40763760 40763789 -125886507 + AT_rich Low_complexity Low_complexity 1 29 0 3 896 2204 40 7 0 chrX 40764094 40764367 -125885929 - L1Md_F2 LINE L1 0 6582 6308 3 896 243 310 14 0 chrX 40764470 40764541 -125885755 - ID4_ SINE ID -3 80 9 3 896 1083 102 0 0 chrX 40766403 40766550 -125883746 + B1_Mus1 SINE Alu 2 148 0 3 896 1042 133 35 0 chrX 40768566 40768739 -125881557 + URR1A DNA MER1_type 48 226 0 3 896 382 307 144 43 chrX 40768927 40769274 -125881022 - L1ME4a LINE L1 -136 5988 5607 3 896 218 306 113 0 chrX 40769275 40769337 -125880959 - ID4 SINE ID -2 81 13 3 896 316 413 52 31 chrX 40769429 40769876 -125880420 - L2a LINE L2 -6 3420 2965 3 896 237 22 43 43 chrX 40770305 40770352 -125879944 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 3 896 1083 75 0 0 chrX 40770352 40770485 -125879811 - B1_Mus2 SINE Alu -11 136 4 3 896 1100 84 0 0 chrX 40770705 40770847 -125879449 - B1_Mus1 SINE Alu -5 143 2 3 896 1231 285 66 11 chrX 40771462 40771810 -125878486 + MTD LTR MaLR 37 403 -16 3 896 990 159 112 19 chrX 40772178 40772383 -125877913 + URR1A DNA MER1_type 1 224 -2 3 896 554 360 20 0 chrX 40772436 40772589 -125877707 + B3A SINE B2 7 162 -36 3 896 735 12 0 0 chrX 40772592 40772676 -125877620 + (CA)n Simple_repeat Simple_repeat 1 84 0 3 896 230 176 20 0 chrX 40772676 40772727 -125877569 + GA-rich Low_complexity Low_complexity 1 52 0 3 896 513 329 6 68 chrX 40773554 40773730 -125876566 + RSINE1 SINE B4 1 165 0 3 896 345 102 0 0 chrX 40774085 40774144 -125876152 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 896 351 0 0 0 chrX 40775483 40775522 -125874774 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 896 279 0 0 0 chrX 40775522 40775552 -125874744 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 896 26 64 0 0 chrX 40777343 40777390 -125872906 + AT_rich Low_complexity Low_complexity 1 47 0 4 896 218 180 40 0 chrX 40777788 40777838 -125872458 + A-rich Low_complexity Low_complexity 1 52 0 4 896 204 40 0 0 chrX 40778319 40778344 -125871952 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 896 204 185 0 0 chrX 40781783 40781837 -125868459 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 896 732 169 0 0 chrX 40781836 40782014 -125868282 + GA-rich Low_complexity Low_complexity 1 178 0 4 896 363 23 0 0 chrX 40782680 40782724 -125867572 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 896 240 35 0 0 chrX 40783051 40783080 -125867216 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 896 360 0 0 0 chrX 40783080 40783119 -125867177 + (GA)n Simple_repeat Simple_repeat 1 40 0 4 896 216 122 0 0 chrX 40784964 40785005 -125865291 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 4 896 1096 143 25 5 chrX 40785569 40785773 -125864523 + Lx6 LINE L1 1661 1868 -4012 4 896 7509 188 65 43 chrX 40785771 40787592 -125862704 + Lx6 LINE L1 5270 7116 -344 4 896 243 0 0 0 chrX 40787592 40787619 -125862677 + (TA)n Simple_repeat Simple_repeat 2 28 0 4 896 7509 203 72 64 chrX 40787619 40787759 -125862537 + Lx6 LINE L1 7117 7258 -202 4 896 363 96 0 0 chrX 40787759 40787811 -125862485 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 896 7509 203 72 64 chrX 40787811 40788005 -125862291 + Lx6 LINE L1 7259 7456 -4 4 896 392 0 21 0 chrX 40788887 40788935 -125861361 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 4 896 218 233 0 0 chrX 40789893 40789936 -125860360 + ID4 SINE ID 2 44 -39 4 896 226 331 39 39 chrX 40790257 40790386 -125859910 - L2c LINE L2 -185 3202 3074 4 896 1156 54 0 20 chrX 40790422 40790572 -125859724 + B1_Mus2 SINE Alu 1 147 0 4 896 987 167 122 20 chrX 40790716 40790912 -125859384 - URR1A DNA MER1_type -10 216 1 4 896 892 194 124 16 chrX 40790986 40791180 -125859116 - ORR1B1 LTR MaLR -179 215 1 4 896 225 0 0 0 chrX 40791871 40791896 -125858400 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 896 261 344 23 39 chrX 40791958 40792088 -125858208 - MLT1H LTR MaLR -7 482 355 4 896 456 374 62 62 chrX 40792074 40792399 -125857897 - MLT1H LTR MaLR -143 406 82 4 896 210 246 0 32 chrX 40792511 40792574 -125857722 + T-rich Low_complexity Low_complexity 1 61 0 4 896 244 382 0 19 chrX 40792673 40792833 -125857463 - MIR SINE MIR -28 234 78 4 896 38 22 0 0 chrX 40793279 40793324 -125856972 + AT_rich Low_complexity Low_complexity 1 45 0 4 896 822 43 0 0 chrX 40793781 40793896 -125856400 + L1Md_F2 LINE L1 6454 6568 -14 4 896 308 294 54 3 chrX 40794047 40794150 -125856146 - PB1D7 SINE Alu -7 113 6 4 896 396 0 0 0 chrX 40794759 40794803 -125855493 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 896 270 0 0 0 chrX 40794803 40794832 -125855464 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 896 852 261 101 54 chrX 40794864 40795078 -125855218 - Lx8 LINE L1 -122 7351 7119 4 896 3479 74 0 0 chrX 40795078 40795535 -125854761 - L1Md_T LINE L1 0 6582 6126 4 896 852 261 101 54 chrX 40795535 40795688 -125854608 - Lx8 LINE L1 -355 7118 6967 4 896 1628 311 50 48 chrX 40795724 40796365 -125853931 - Lx8 LINE L1 -641 6832 6191 4 896 696 278 40 26 chrX 40796393 40796696 -125853600 + Lx9 LINE L1 5662 5968 -1676 4 896 23 0 0 0 chrX 40796732 40796755 -125853541 + AT_rich Low_complexity Low_complexity 1 23 0 4 896 360 336 7 32 chrX 40798919 40799073 -125851223 + RMER15 LTR ERVL 293 442 -133 4 896 464 242 57 0 chrX 40799331 40799455 -125850841 - L1M2 LINE L1 -883 5260 5130 4 896 3228 176 62 23 chrX 40799449 40799702 -125850594 - L1_Mur3 LINE L1 -1275 4605 4335 4 896 4134 76 0 7 chrX 40799702 40800259 -125850037 - L1_Mus4 LINE L1 0 6636 6084 4 896 3228 176 62 23 chrX 40800259 40800789 -125849507 - L1_Mur3 LINE L1 -1546 4334 3791 4 896 3407 191 36 1 chrX 40800789 40801483 -125848813 + L1_Mur3 LINE L1 4653 5370 -510 4 896 370 319 127 12 chrX 40801678 40801732 -125848564 - L1M2 LINE L1 -1057 4820 4753 4 896 414 0 0 0 chrX 40801732 40801778 -125848518 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 896 430 301 108 16 chrX 40801778 40802126 -125848170 - L1M2 LINE L1 -1368 4775 4373 4 896 678 174 29 14 chrX 40802248 40802388 -125847908 - URR1B DNA MER1_type 0 225 84 4 896 238 383 50 38 chrX 40803139 40803368 -125846928 - B4A SINE B4 -55 237 2 4 896 320 285 72 31 chrX 40803379 40803472 -125846824 - B1F2 SINE Alu -27 93 3 4 896 1881 102 84 7 chrX 40803604 40803900 -125846396 - ORR1A2 LTR MaLR -8 319 1 4 896 198 0 0 0 chrX 40804473 40804497 -125845799 + L3 LINE CR1 4455 4478 -11 4 896 670 84 9 9 chrX 40804498 40804606 -125845690 + (TTTTC)n Simple_repeat Simple_repeat 3 110 0 4 896 1189 62 0 0 chrX 40804616 40804761 -125845535 - B1_Mm SINE Alu -2 145 1 4 896 25 0 0 0 chrX 40804980 40805005 -125845291 + AT_rich Low_complexity Low_complexity 1 25 0 4 896 198 256 115 0 chrX 40805769 40805847 -125844449 + MIR SINE MIR 92 178 -84 4 896 1659 16 0 5 chrX 40806722 40806916 -125843380 + B2_Mm1a SINE B2 1 193 0 4 896 25389 152 10 51 chrX 40807011 40811381 -125838915 + L1VL2 LINE L1 393 4747 -1136 4 896 1130 91 0 0 chrX 40811381 40811546 -125838750 + L1Md_F2 LINE L1 6406 6570 -12 4 896 25389 145 6 59 chrX 40811546 40811711 -125838585 + L1VL2 LINE L1 4748 4771 -1112 4 896 1372 83 11 0 chrX 40811711 40811891 -125838405 + B2_Mm2 SINE B2 1 182 -13 4 896 260 19 56 37 chrX 40811891 40811945 -125838351 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 4 896 25389 145 6 59 chrX 40811945 40813105 -125837191 + L1VL2 LINE L1 4772 5843 -40 4 896 1834 157 18 15 chrX 40813106 40813437 -125836859 + ORR1A3-int LTR MaLR 193 524 -1439 4 896 282 264 11 22 chrX 40813931 40814020 -125836276 + MLT1E2 LTR MaLR 540 627 0 4 896 26 74 0 0 chrX 40814065 40814119 -125836177 + AT_rich Low_complexity Low_complexity 1 54 0 4 896 426 175 0 0 chrX 40814401 40814481 -125835815 + (TA)n Simple_repeat Simple_repeat 1 80 0 4 896 21 0 0 0 chrX 40815101 40815122 -125835174 + AT_rich Low_complexity Low_complexity 1 21 0 4 896 321 155 0 0 chrX 40815315 40815373 -125834923 + (TAAA)n Simple_repeat Simple_repeat 3 60 0 4 896 917 122 0 0 chrX 40815647 40815767 -125834529 + L1_Mm LINE L1 5467 5586 -297 4 896 7662 60 18 7 chrX 40815767 40816752 -125833544 + L1Md_F2 LINE L1 5587 6582 0 4 896 210 208 20 20 chrX 40816817 40816866 -125833430 + MIRc SINE MIR 102 150 -118 4 896 1004 85 7 0 chrX 40816908 40817049 -125833247 + B1_Mm SINE Alu 3 144 -3 4 896 351 0 0 0 chrX 40817049 40817088 -125833208 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 4 896 1110 53 0 0 chrX 40817579 40817712 -125832584 + B1_Mm SINE Alu 2 134 -13 4 896 252 0 0 0 chrX 40817712 40817740 -125832556 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 4 896 230 0 33 0 chrX 40817759 40817789 -125832507 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 896 235 196 39 0 chrX 40818082 40818133 -125832163 + MTE2a LTR MaLR 299 351 -28 4 896 585 0 0 0 chrX 40818399 40818464 -125831832 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 4 896 1172 207 14 0 chrX 40818534 40818756 -125831540 - URR1B DNA MER1_type 0 225 1 4 896 35 88 0 0 chrX 40818789 40818880 -125831416 + AT_rich Low_complexity Low_complexity 1 91 0 4 896 354 243 0 0 chrX 40819013 40819083 -125831213 + RMER2 LTR ERV1 1 70 -497 4 896 1784 170 10 0 chrX 40819087 40819393 -125830903 - L1_Mur1 LINE L1 -106 5780 5472 4 896 6092 151 54 10 chrX 40819385 40819727 -125830569 + L1_Mur2 LINE L1 4286 4621 -1256 4 896 243 0 0 0 chrX 40819727 40819754 -125830542 + (CAA)n Simple_repeat Simple_repeat 2 28 0 4 896 6092 151 54 10 chrX 40819754 40820512 -125829784 + L1_Mur2 LINE L1 4622 5433 -444 4 896 1997 188 18 46 chrX 40820512 40820946 -125829350 - RLTR25B LTR ERVK -286 742 321 4 896 660 176 0 0 chrX 40820946 40821082 -125829214 + (TA)n Simple_repeat Simple_repeat 2 137 0 4 896 1312 178 102 8 chrX 40821084 40821105 -125829191 - RLTR25B LTR ERVK -738 365 346 4 896 252 0 0 0 chrX 40821105 40821133 -125829163 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 896 1312 178 102 8 chrX 40821133 40821377 -125828919 - RLTR25B LTR ERVK -758 345 76 4 896 284 169 246 0 chrX 40821375 40821408 -125828888 + RMER19C LTR ERVK 531 563 -48 4 896 1119 61 0 0 chrX 40821408 40821556 -125828740 + L1_Mus1 LINE L1 6418 6565 -2 4 896 284 169 246 0 chrX 40821556 40821587 -125828709 + RMER19C LTR ERVK 564 609 -2 4 896 553 311 77 75 chrX 40821588 40822137 -125828159 - Lx8 LINE L1 -1184 6289 5740 4 896 24958 86 30 11 chrX 40822135 40822412 -125827884 - L1_Mur1 LINE L1 -879 5007 4740 4 896 180 0 0 0 chrX 40822412 40822432 -125827864 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 4 896 24958 102 45 11 chrX 40822432 40826958 -125823338 - L1_Mur1 LINE L1 -1147 4739 31 4 896 3935 51 6 0 chrX 40827151 40827642 -125822654 - L1Md_F2 LINE L1 -1 6581 6088 4 896 2656 101 0 58 chrX 40827791 40828222 -125822074 + L1Md_F2 LINE L1 6174 6579 -3 4 896 435 308 89 0 chrX 40828236 40828450 -125821846 + L1_Mur3 LINE L1 4683 4915 -965 4 896 351 0 0 0 chrX 40828623 40828662 -125821634 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 896 2258 218 25 82 chrX 40828731 40829053 -125821243 + L1_Mur3 LINE L1 713 983 -6745 4 896 3566 39 2 5 chrX 40829053 40829495 -125820801 + L1Md_F2 LINE L1 6140 6580 -2 4 896 6433 195 52 22 chrX 40829495 40831211 -125819085 + L1_Mur3 LINE L1 984 2775 -3105 4 896 1365 246 17 17 chrX 40831208 40831556 -125818740 - Lx7 LINE L1 -1746 5950 5603 4 896 262 230 0 54 chrX 40831949 40832041 -125818255 - L1_Rod LINE L1 -742 5105 5019 4 896 2605 175 12 73 chrX 40832157 40833623 -125816673 + L1Md_F LINE L1 300 1586 -2328 4 896 3858 80 25 0 chrX 40833619 40834142 -125816154 - L1_Mm LINE L1 -674 5209 4674 4 896 2041 98 38 0 chrX 40834134 40834417 -125815879 + L1_Mm LINE L1 5301 5586 -297 4 896 7995 53 1 3 chrX 40834417 40835413 -125814883 + L1Md_F2 LINE L1 5587 6580 -2 4 896 2041 98 38 0 chrX 40835413 40835444 -125814852 + L1_Mm LINE L1 5587 5626 -257 4 896 5413 122 6 26 chrX 40835416 40835877 -125814419 + L1Md_F LINE L1 1582 2033 -3850 4 896 805 51 0 17 chrX 40835877 40835997 -125814299 + L1Md_F3 LINE L1 6455 6572 -12 4 896 5413 122 6 26 chrX 40835997 40836443 -125813853 + L1Md_F LINE L1 2034 2470 -3413 4 896 3421 86 2 0 chrX 40836438 40836905 -125813391 - L1_Mus1 LINE L1 -299 5584 5117 4 896 7604 74 0 8 chrX 40836905 40837935 -125812361 + L1_Mus1 LINE L1 5546 6567 0 4 896 6553 124 11 20 chrX 40837946 40838162 -125812134 + MusHAL1 LINE L1 1252 1447 -1265 4 896 2742 65 0 5 chrX 40838162 40838531 -125811765 - L1Md_F2 LINE L1 0 6582 6216 4 896 6553 124 11 20 chrX 40838531 40839422 -125810874 + MusHAL1 LINE L1 1448 2349 -363 4 896 12766 94 26 10 chrX 40839418 40841966 -125808330 - L1VL4 LINE L1 -758 2801 201 4 896 351 0 0 0 chrX 40842068 40842107 -125808189 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 4 896 26 30 0 0 chrX 40842401 40842434 -125807862 + AT_rich Low_complexity Low_complexity 1 33 0 4 896 294 73 0 0 chrX 40842619 40842660 -125807636 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 896 186 176 29 0 chrX 40843723 40843757 -125806539 - MIRm SINE MIR -129 147 113 5 896 3553 138 4 0 chrX 40843895 40844481 -125805815 - L1_Mm LINE L1 -751 5413 4798 5 896 7055 89 17 3 chrX 40844476 40845656 -125804640 + L1_Mus1 LINE L1 5372 6567 0 5 896 468 0 0 0 chrX 40845725 40845777 -125804519 + (TC)n Simple_repeat Simple_repeat 1 52 0 5 896 225 0 0 0 chrX 40845777 40845801 -125804495 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 896 352 279 68 8 chrX 40845930 40846155 -125804141 - L1MA5 LINE L1 -27 6273 6039 5 896 423 0 0 0 chrX 40846394 40846441 -125803855 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 5 896 1065 51 0 0 chrX 40846443 40846580 -125803716 - B1_Mus1 SINE Alu -6 142 6 5 896 396 0 0 0 chrX 40847246 40847290 -125803006 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 896 180 0 0 0 chrX 40847481 40847501 -125802795 + (A)n Simple_repeat Simple_repeat 1 20 0 5 896 420 298 89 89 chrX 40847685 40847921 -125802375 - RLTR18 LTR ERVK -2 614 379 5 896 827 187 0 0 chrX 40847924 40848074 -125802222 + B1_Mur4 SINE Alu 1 150 0 5 896 276 111 0 0 chrX 40848074 40848119 -125802177 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 5 896 255 261 0 84 chrX 40848697 40848768 -125801528 - RLTR18 LTR ERVK -335 281 217 5 896 1620 311 90 78 chrX 40848848 40849364 -125800932 + Lx9 LINE L1 6481 6976 -668 5 896 1331 311 14 5 chrX 40849364 40849777 -125800519 + MTD LTR MaLR 3 419 0 5 896 1620 311 90 78 chrX 40849777 40850222 -125800074 + Lx9 LINE L1 6977 7454 -190 5 896 360 43 0 0 chrX 40850226 40850272 -125800024 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 896 339 239 0 14 chrX 40850273 40850345 -125799951 - MER5A1 DNA MER1_type -71 95 25 5 896 328 375 12 24 chrX 40850509 40850673 -125799623 - MIRb SINE MIR -79 189 28 5 896 70 54 0 0 chrX 40850774 40850886 -125799410 + AT_rich Low_complexity Low_complexity 1 112 0 5 896 213 386 20 0 chrX 40851024 40851125 -125799171 - MIRb SINE MIR -68 200 98 5 896 363 380 22 27 chrX 40851691 40851875 -125798421 + Charlie24 DNA MER1_type 286 468 -1982 5 896 41 36 0 0 chrX 40852065 40852120 -125798176 + AT_rich Low_complexity Low_complexity 1 55 0 5 896 30 77 0 0 chrX 40852229 40852294 -125798002 + AT_rich Low_complexity Low_complexity 1 65 0 5 896 1796 234 70 24 chrX 40852483 40852939 -125797357 - Lx9 LINE L1 -129 7515 7039 5 896 2928 187 40 42 chrX 40852942 40853643 -125796653 + RMER6C LTR ERVK 1 716 -4 5 896 594 180 8 8 chrX 40853647 40853770 -125796526 - Lx9 LINE L1 -608 7036 6914 5 896 234 211 19 0 chrX 40854318 40854370 -125795926 + L1VL4 LINE L1 452 504 -6480 5 896 3804 175 29 64 chrX 40854520 40855869 -125794427 + L1VL4 LINE L1 880 2173 -3713 5 896 3104 105 9 0 chrX 40855859 40856306 -125793990 - L1_Mus2 LINE L1 -216 5667 5217 5 896 6203 79 39 1 chrX 40856303 40857155 -125793141 + L1_Mus2 LINE L1 5683 6566 0 5 896 3032 161 23 2 chrX 40857152 40857717 -125792579 + MusHAL1 LINE L1 942 1518 -1194 5 896 28017 79 13 1 chrX 40857708 40862278 -125788018 + Lx3C LINE L1 416 5217 -669 5 896 896 43 7 21 chrX 40862278 40862419 -125787877 + (TA)n Simple_repeat Simple_repeat 1 139 0 5 896 21372 171 63 1 chrX 40862419 40862771 -125787525 + Lx3C LINE L1 5218 5581 -305 5 896 8068 40 13 2 chrX 40862778 40863763 -125786533 + L1Md_F3 LINE L1 5587 6582 -2 5 896 3167 181 88 118 chrX 40863834 40864719 -125785577 - L1_Mm LINE L1 -61 5822 4964 5 896 3339 214 54 10 chrX 40864722 40865837 -125784459 + Lx3C LINE L1 5796 7006 -3 5 896 25 65 0 0 chrX 40866121 40866167 -125784129 + AT_rich Low_complexity Low_complexity 1 46 0 5 896 1893 170 50 0 chrX 40866638 40866961 -125783335 + ORR1B2 LTR MaLR 29 367 0 5 896 26 0 0 0 chrX 40867576 40867602 -125782694 + AT_rich Low_complexity Low_complexity 1 26 0 5 896 3393 180 19 55 chrX 40867639 40868441 -125781855 - Lx2B LINE L1 -36 6961 6212 5 896 431 295 44 44 chrX 40868639 40868718 -125781578 - MTEb LTR MaLR -244 135 51 5 896 1459 162 87 144 chrX 40868718 40869107 -125781189 - ORR1B2 LTR MaLR 0 367 1 5 896 431 295 44 44 chrX 40869107 40869162 -125781134 - MTEb LTR MaLR -329 50 1 5 896 365 161 135 22 chrX 40869209 40869298 -125780998 + MLT1A LTR MaLR 1 99 -291 5 896 732 248 13 7 chrX 40869322 40869476 -125780820 + B3A SINE B2 5 159 -39 5 896 254 279 12 25 chrX 40869484 40869565 -125780731 + B3A SINE B2 119 198 0 5 896 244 271 0 0 chrX 40869590 40869649 -125780647 + MLT1A LTR MaLR 103 161 -229 5 896 243 175 62 16 chrX 40869669 40869733 -125780563 - Lx7 LINE L1 0 7696 7630 5 896 189 0 0 0 chrX 40869770 40869791 -125780505 + (TC)n Simple_repeat Simple_repeat 2 22 0 5 896 483 73 0 0 chrX 40869806 40869874 -125780422 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 896 1695 95 0 16 chrX 40869902 40870159 -125780137 + L1Md_F2 LINE L1 6328 6580 -2 5 896 372 276 47 16 chrX 40870182 40870311 -125779985 + MLT1A LTR MaLR 237 369 -5 5 896 26 74 0 0 chrX 40871592 40871646 -125778650 + AT_rich Low_complexity Low_complexity 1 54 0 5 896 7293 96 8 2 chrX 40871655 40873205 -125777091 - L1_Mus2 LINE L1 -1 6565 5010 5 896 3327 114 2 31 chrX 40873210 40873754 -125776542 - L1_Mus2 LINE L1 -1196 4687 4160 5 896 341 190 0 0 chrX 40873755 40873813 -125776483 + B3 SINE B2 18 75 -141 5 896 24 53 0 0 chrX 40874137 40874175 -125776121 + AT_rich Low_complexity Low_complexity 1 38 0 5 896 33 56 0 0 chrX 40874383 40874437 -125775859 + AT_rich Low_complexity Low_complexity 1 54 0 5 896 3911 38 6 2 chrX 40874443 40874916 -125775380 - L1Md_F3 LINE L1 -15 6569 6095 5 896 265 197 0 16 chrX 40874955 40875017 -125775279 - L1_Mur3 LINE L1 -6782 930 870 5 896 2334 307 103 37 chrX 40875399 40876610 -125773686 + Lx8 LINE L1 6090 7380 -93 5 896 573 150 0 0 chrX 40876612 40876712 -125773584 + (GA)n Simple_repeat Simple_repeat 2 101 0 5 896 635 67 0 11 chrX 40876721 40876811 -125773485 + (GGAAA)n Simple_repeat Simple_repeat 3 91 0 5 896 3505 235 76 45 chrX 40877065 40877571 -125772725 - Lx5 LINE L1 -5 7045 6511 5 896 1912 58 0 4 chrX 40877571 40877815 -125772481 - L1_Mus1 LINE L1 -1 6566 6324 5 896 3505 235 76 45 chrX 40877815 40878176 -125772120 - Lx5 LINE L1 -540 6510 6151 5 896 2319 178 40 4 chrX 40878174 40878654 -125771642 - L1_Mur2 LINE L1 -2137 3740 3244 5 896 278 333 35 26 chrX 40880671 40880785 -125769511 + B1F SINE Alu 1 115 -34 5 896 1125 303 78 9 chrX 40881007 40881466 -125768830 - Lx8 LINE L1 -219 7254 6764 5 896 231 222 37 0 chrX 40881522 40881576 -125768720 - Lx8 LINE L1 -1318 6155 6100 5 896 3797 78 0 39 chrX 40881607 40882151 -125768145 + L1_Mm LINE L1 5175 5697 -186 5 896 3872 72 0 0 chrX 40882150 40882651 -125767645 + L1Md_F2 LINE L1 5085 5585 -298 5 896 7448 71 1 19 chrX 40882654 40883649 -125766647 + L1Md_F2 LINE L1 5594 6570 -12 5 896 508 311 0 7 chrX 40884571 40884707 -125765589 - B1F SINE Alu -6 143 9 5 896 1467 70 45 2 chrX 40884966 40885178 -125765118 - L1Md_F2 LINE L1 -412 5947 5687 5 896 5206 60 24 3 chrX 40885178 40885858 -125764438 + L1Md_F2 LINE L1 5878 6571 -11 5 896 22 80 0 0 chrX 40886276 40886326 -125763970 + AT_rich Low_complexity Low_complexity 1 50 0 5 896 7469 117 2 3 chrX 40886614 40888490 -125761806 + L1_Mus4 LINE L1 4748 6621 -15 5 896 1055 97 7 0 chrX 40888490 40888635 -125761661 + B1_Mm SINE Alu 2 147 0 5 896 7469 100 3 3 chrX 40888635 40888647 -125761649 + L1_Mus4 LINE L1 6622 6633 -3 5 896 21 57 0 0 chrX 40888969 40889004 -125761292 + AT_rich Low_complexity Low_complexity 1 35 0 5 896 4318 72 37 7 chrX 40889044 40889632 -125760664 + L1Md_F2 LINE L1 5963 6568 -14 5 896 1755 250 60 32 chrX 40889634 40890359 -125759937 + Lx9 LINE L1 5273 6018 -1626 5 896 26 74 0 0 chrX 40890440 40890494 -125759802 + AT_rich Low_complexity Low_complexity 1 54 0 5 896 22 0 0 0 chrX 40891266 40891288 -125759008 + AT_rich Low_complexity Low_complexity 1 22 0 5 896 1488 120 44 12 chrX 40891295 40891547 -125758749 + Lx LINE L1 6395 6654 0 5 896 23 0 0 0 chrX 40893201 40893224 -125757072 + AT_rich Low_complexity Low_complexity 1 23 0 5 896 250 302 98 59 chrX 40893607 40893709 -125756587 - ID_B1 SINE B4 -28 196 91 5 896 605 298 43 81 chrX 40893725 40893798 -125756498 - MTEa LTR MaLR 0 379 321 5 896 189 0 0 0 chrX 40893798 40893819 -125756477 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 5 896 605 303 127 46 chrX 40893819 40894102 -125756194 - MTEa LTR MaLR -59 320 3 5 13 590 233 45 8 chrX 40894396 40894530 -125755766 + MTE-int LTR MaLR 290 428 -1152 5 897 1203 220 182 10 chrX 40895306 40895816 -125754480 + Lx9 LINE L1 7046 7643 -1 5 897 202 330 87 11 chrX 40895879 40895971 -125754325 - MER5A DNA MER1_type 0 189 91 5 897 261 0 0 0 chrX 40896293 40896322 -125753974 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 5 897 391 60 0 0 chrX 40896326 40896386 -125753910 - B1_Mm SINE Alu -7 140 54 5 897 251 219 31 15 chrX 40896428 40896493 -125753803 - MER5B DNA MER1_type -25 153 88 5 897 25 31 0 0 chrX 40896536 40896568 -125753728 + AT_rich Low_complexity Low_complexity 1 32 0 5 897 228 111 0 0 chrX 40897220 40897256 -125753040 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 897 1125 267 132 62 chrX 40898629 40899058 -125751238 - Lx9 LINE L1 -1 7643 7145 5 897 1129 106 0 11 chrX 40899058 40899240 -125751056 + (TC)n Simple_repeat Simple_repeat 1 180 0 5 897 1125 267 132 62 chrX 40899240 40899309 -125750987 - Lx9 LINE L1 -500 7144 7085 5 897 291 54 0 0 chrX 40899309 40899346 -125750950 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 897 1125 267 132 62 chrX 40899346 40899541 -125750755 - Lx9 LINE L1 -560 7084 6900 5 897 676 102 8 8 chrX 40899675 40899803 -125750493 - L1_Mus4 LINE L1 -6 6630 6503 5 897 1879 188 24 27 chrX 40899805 40900002 -125750294 - RMER6D LTR ERVK -349 371 182 5 897 3416 15 8 0 chrX 40900002 40900395 -125749901 + MTA_Mm LTR MaLR 1 396 0 5 897 1879 188 24 27 chrX 40900395 40900569 -125749727 - RMER6D LTR ERVK -539 181 1 5 897 411 297 45 9 chrX 40900744 40900965 -125749331 - L1MCa LINE L1 -4284 2224 1996 5 897 632 243 193 42 chrX 40901033 40901488 -125748808 - L1MCa LINE L1 -4757 1751 1228 5 897 23 0 0 0 chrX 40902521 40902544 -125747752 + AT_rich Low_complexity Low_complexity 1 23 0 5 897 420 307 59 0 chrX 40902709 40902862 -125747434 + RSINE1 SINE B4 4 165 0 5 897 474 299 0 56 chrX 40903286 40903428 -125746868 + B4A SINE B4 159 292 0 5 897 349 284 50 90 chrX 40904279 40904480 -125745816 - L2c LINE L2 0 3387 3195 5 897 22 35 0 0 chrX 40905126 40905155 -125745141 + AT_rich Low_complexity Low_complexity 1 29 0 5 897 257 228 0 151 chrX 40905468 40905561 -125744735 - ID_B1 SINE B4 0 224 146 5 897 734 213 0 7 chrX 40905480 40905627 -125744669 - B1_Mur4 SINE Alu -7 141 3 5 897 277 291 62 12 chrX 40905667 40905814 -125744482 - MER57E1 LTR ERV1 -11 425 267 6 897 7758 76 48 20 chrX 40905857 40906988 -125743308 - Lx3_Mus LINE L1 -7 7002 5841 6 897 758 44 0 0 chrX 40906988 40907079 -125743217 + Lx3_Mus LINE L1 5743 5833 -1176 6 897 231 114 0 0 chrX 40907981 40908016 -125742280 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 6 897 541 276 57 42 chrX 40908179 40908391 -125741905 - B3 SINE B2 -1 215 1 6 897 201 108 0 0 chrX 40908558 40908595 -125741701 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 6 897 1110 82 7 0 chrX 40908596 40908742 -125741554 - B1_Mus1 SINE Alu -1 147 1 6 897 216 355 49 7 chrX 40909662 40909804 -125740492 + MIR SINE MIR 26 173 -89 6 897 248 352 57 0 chrX 40909976 40910081 -125740215 - MIRc SINE MIR -125 143 33 6 897 439 341 20 68 chrX 40910081 40910433 -125739863 - MTEa LTR MaLR 0 379 43 6 897 253 303 30 20 chrX 40910600 40910701 -125739595 - Lx7 LINE L1 -1995 5701 5600 6 897 225 213 0 0 chrX 40910672 40910719 -125739577 + L1M2 LINE L1 5739 5785 -506 6 897 1088 322 36 19 chrX 40910733 40911258 -125739038 + Lx7 LINE L1 5633 6166 -1530 6 897 341 190 25 0 chrX 40911260 40911339 -125738957 + (CATA)n Simple_repeat Simple_repeat 4 84 0 6 897 349 70 35 0 chrX 40911593 40911650 -125738646 + (CCCCCT)n Simple_repeat Simple_repeat 6 64 0 6 897 5299 91 12 0 chrX 40911758 40912494 -125737802 + L1_Mus1 LINE L1 5823 6567 0 6 897 1583 126 68 25 chrX 40912573 40912851 -125737445 - ORR1A2 LTR MaLR 0 327 38 6 897 1324 245 37 28 chrX 40912855 40913182 -125737114 - Lx6 LINE L1 -249 7211 6882 6 897 868 154 111 0 chrX 40913181 40913343 -125736953 + Lx7 LINE L1 6719 6898 -798 6 897 463 182 168 29 chrX 40913352 40913483 -125736813 + ORR1C2 LTR MaLR 142 326 -58 6 897 469 266 94 6 chrX 40913550 40913720 -125736576 + MYSERV-int LTR ERVK 5052 5236 -1314 6 897 306 0 0 0 chrX 40914811 40914845 -125735451 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 6 897 557 226 45 8 chrX 40914858 40914992 -125735304 - Lx4B LINE L1 -52 7006 6868 6 897 33649 69 2 5 chrX 40915230 40917931 -125732365 - L1Md_F2 LINE L1 -1 6581 3883 6 897 3069 20 0 0 chrX 40917931 40918277 -125732019 + ORR1A0 LTR MaLR 1 346 0 6 897 33649 82 2 5 chrX 40918277 40921809 -125728487 - L1Md_F2 LINE L1 -2001 3882 369 6 897 648 254 58 44 chrX 40921825 40922167 -125728129 + MYSERV-int LTR ERVK 5212 5558 -992 6 897 1830 230 99 14 chrX 40922167 40922661 -125727635 + L1_Mus1 LINE L1 338 873 -5743 6 897 3679 72 19 29 chrX 40922661 40923178 -125727118 + RLTR1B LTR ERV1 1 512 0 6 897 9951 64 1 40 chrX 40923179 40924526 -125725770 - RLTR1B-int LTR ERV1 -1087 2212 918 6 897 15858 168 4 17 chrX 40924526 40924907 -125725389 + L1_Mus1 LINE L1 885 1263 -5461 6 897 210 37 0 0 chrX 40924907 40924934 -125725362 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 897 15858 123 2 4 chrX 40924934 40927423 -125722873 + L1_Mus1 LINE L1 1264 3750 -2133 6 897 7424 81 18 1 chrX 40927416 40928663 -125721633 + L1_Mus1 LINE L1 5300 6564 -3 6 897 251 236 56 0 chrX 40928682 40928754 -125721542 + MYSERV6-int LTR ERVK 8008 8083 -876 6 897 246 32 0 0 chrX 40928775 40928806 -125721490 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 897 225 226 0 19 chrX 40928810 40928864 -125721432 + ORR1C2 LTR MaLR 319 371 -3 6 897 385 326 77 39 chrX 40928865 40929098 -125721198 + Lx8 LINE L1 6265 6506 -967 6 897 2753 101 30 0 chrX 40929164 40929559 -125720737 + MTB_Mm LTR MaLR 1 407 0 6 897 410 271 9 18 chrX 40929631 40929740 -125720556 - ORR1D1 LTR MaLR -246 128 21 6 897 25 31 0 0 chrX 40929879 40929911 -125720385 + AT_rich Low_complexity Low_complexity 1 32 0 6 897 231 274 106 25 chrX 40930064 40930225 -125720071 + Charlie4a DNA MER1_type 260 433 -75 6 897 458 350 6 11 chrX 40930247 40930426 -125719870 - B3A SINE B2 -16 182 5 6 897 467 252 35 2 chrX 40931101 40931218 -125719078 + MTC LTR MaLR 265 388 -33 6 897 636 275 17 34 chrX 40931721 40931898 -125718398 + B3 SINE B2 2 175 -41 6 897 311 295 0 0 chrX 40932821 40932899 -125717397 + BC1_Mm scRNA scRNA 10 87 -65 6 897 235 271 127 81 chrX 40933469 40933642 -125716654 - Tigger12c DNA MER2_type -372 362 182 6 897 1708 299 172 4 chrX 40933877 40934590 -125715706 - Lx8 LINE L1 -434 7039 6207 6 897 280 273 0 13 chrX 40934809 40934887 -125715409 + L1_Rod LINE L1 5141 5217 -630 6 897 231 61 0 0 chrX 40934903 40934936 -125715360 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 6 897 2037 251 54 43 chrX 40934936 40935586 -125714710 - Lx6 LINE L1 -1069 6391 5735 6 897 297 0 0 0 chrX 40935640 40935673 -125714623 + (TTA)n Simple_repeat Simple_repeat 1 33 0 6 897 3633 45 7 0 chrX 40935673 40936115 -125714181 - L1Md_F3 LINE L1 -26 6558 6114 6 897 1474 222 3 14 chrX 40936105 40936402 -125713894 - Lx6 LINE L1 -162 5718 5425 6 897 2179 233 114 24 chrX 40936393 40937385 -125712911 + Lx6 LINE L1 6380 7460 0 6 897 1176 300 33 66 chrX 40937368 40937477 -125712819 + Lx7 LINE L1 5254 5350 -530 6 897 1753 129 44 39 chrX 40937477 40937815 -125712481 - Lx LINE L1 0 6654 6315 6 897 1176 283 34 39 chrX 40937815 40938383 -125711913 + Lx7 LINE L1 5351 5913 -1783 6 897 4908 62 8 20 chrX 40938531 40939189 -125711107 - L1Md_F2 LINE L1 0 6582 5933 6 897 397 60 0 0 chrX 40939190 40939240 -125711056 + L1Md_F2 LINE L1 5885 5934 -632 6 897 187 318 61 0 chrX 40939589 40939655 -125710641 - L2 LINE L2 -822 2597 2528 6 897 28 29 0 0 chrX 40940313 40940348 -125709948 + AT_rich Low_complexity Low_complexity 1 35 0 6 897 979 153 56 11 chrX 40940348 40940526 -125709770 - B2_Mm2 SINE B2 -9 186 1 6 897 25 31 0 0 chrX 40940567 40940599 -125709697 + AT_rich Low_complexity Low_complexity 1 32 0 6 897 22 35 0 0 chrX 40940653 40940682 -125709614 + AT_rich Low_complexity Low_complexity 1 29 0 6 897 393 117 0 0 chrX 40941730 40941790 -125708506 + (A)n Simple_repeat Simple_repeat 1 60 0 6 897 319 273 259 23 chrX 40941880 40942092 -125708204 + MER44B DNA MER2_type 57 318 -232 6 897 618 26 0 0 chrX 40943675 40943751 -125706545 + (GA)n Simple_repeat Simple_repeat 1 76 0 6 897 2625 78 6 0 chrX 40947038 40947399 -125702897 - L1_Mus3 LINE L1 -1 6637 6275 6 897 700 255 38 21 chrX 40947754 40947979 -125702317 - RLTR18B LTR ERVK -392 224 3 6 897 577 337 26 5 chrX 40947997 40948188 -125702108 - MTE2a LTR MaLR -184 195 1 6 897 612 259 6 25 chrX 40948190 40948352 -125701944 - MTE2a-int LTR MaLR -2 1578 1420 6 897 298 0 48 0 chrX 40948443 40948485 -125701811 + (CAA)n Simple_repeat Simple_repeat 2 45 0 6 897 1024 344 99 26 chrX 40948487 40949251 -125701045 - MTE2a-int LTR MaLR -165 1415 596 6 897 2376 89 3 44 chrX 40949294 40949635 -125700661 + ORR1A2 LTR MaLR 1 327 0 6 897 4174 244 73 18 chrX 40949652 40950673 -125699623 - Lx5 LINE L1 -3 7047 5970 6 897 1158 88 0 0 chrX 40950707 40950956 -125699340 + (TTC)n Simple_repeat Simple_repeat 1 249 0 6 897 366 80 0 0 chrX 40950979 40951029 -125699267 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 6 897 1756 141 11 4 chrX 40951029 40951307 -125698989 - Lx3A LINE L1 -13 6968 6689 6 897 415 211 0 0 chrX 40951308 40951398 -125698898 - L1_Mur2 LINE L1 -481 5396 5307 6 897 3142 235 37 14 chrX 40951424 40952123 -125698173 - Lx5 LINE L1 -3 7047 6333 6 897 787 194 69 48 chrX 40952125 40952314 -125697982 + B2_Mm2 SINE B2 2 194 -1 6 897 5067 178 74 34 chrX 40952317 40953053 -125697243 - L1_Mur2 LINE L1 -562 5315 4538 6 897 1061 110 0 0 chrX 40953053 40953064 -125697232 - B1_Mus1 SINE Alu 0 148 138 6 897 270 0 0 0 chrX 40953064 40953094 -125697202 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 6 897 1061 110 0 0 chrX 40953094 40953228 -125697068 - B1_Mus1 SINE Alu -11 137 4 6 897 5067 178 74 34 chrX 40953228 40953649 -125696647 - L1_Mur2 LINE L1 -1340 4537 4111 6 897 357 332 69 60 chrX 40953652 40953870 -125696426 - RMER2 LTR ERV1 -4 563 344 6 897 25 83 0 0 chrX 40954122 40954182 -125696114 + AT_rich Low_complexity Low_complexity 1 60 0 6 897 396 321 27 48 chrX 40954687 40954834 -125695462 - MLT1E1A LTR MaLR 0 680 537 6 897 264 318 98 77 chrX 40954853 40955047 -125695249 + B3A SINE B2 1 198 0 6 897 809 280 73 46 chrX 40955404 40955450 -125694846 - L1MA5A LINE L1 -460 5837 5793 6 897 369 0 0 0 chrX 40955450 40955491 -125694805 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 897 234 0 0 0 chrX 40955491 40955516 -125694780 + (TA)n Simple_repeat Simple_repeat 2 27 0 6 897 809 280 73 46 chrX 40955516 40955947 -125694349 - L1MA5A LINE L1 -505 5792 5347 6 897 295 351 22 7 chrX 40955949 40956084 -125694212 - L1MA5A LINE L1 -1267 4876 4740 6 897 30 0 0 0 chrX 40956094 40956124 -125694172 + AT_rich Low_complexity Low_complexity 1 30 0 6 897 29195 112 14 13 chrX 40956236 40958835 -125691461 - L1_Mus1 LINE L1 -1 6566 3946 6 897 226 278 0 0 chrX 40958835 40958889 -125691407 + Charlie24 DNA MER1_type 1250 1303 -1147 6 897 29195 112 14 13 chrX 40958889 40961606 -125688690 - L1_Mus1 LINE L1 -1 3945 1203 6 897 4814 142 32 5 chrX 40961575 40962376 -125687920 - L1Md_F LINE L1 -5383 1136 314 6 897 196 267 33 16 chrX 40962995 40963056 -125687240 - MIRb SINE MIR -164 104 43 6 897 1227 316 81 22 chrX 40964178 40965051 -125685245 + Lx8 LINE L1 5032 5972 -1672 6 897 701 295 6 34 chrX 40965209 40965388 -125684908 - B3A SINE B2 0 198 25 6 897 449 268 36 0 chrX 40965391 40965529 -125684767 + Lx8 LINE L1 6127 6269 -1204 6 897 1750 189 35 0 chrX 40965619 40965932 -125684364 - MTC LTR MaLR -97 324 1 6 897 349 313 0 17 chrX 40965932 40966049 -125684247 + Lx8 LINE L1 6404 6518 -955 6 897 9310 109 8 5 chrX 40966088 40967731 -125682565 - Lx3_Mus LINE L1 -8 7001 5359 6 897 26671 80 9 3 chrX 40967728 40972132 -125678164 - L1Md_F2 LINE L1 0 6582 2156 6 897 207 0 0 0 chrX 40972132 40972155 -125678141 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 897 26671 83 65 8 chrX 40972155 40973263 -125677033 - L1Md_F2 LINE L1 -3728 2155 2110 6 897 1750 76 4 25 chrX 40973315 40973558 -125676738 + L1_Mus1 LINE L1 6330 6567 0 6 897 896 76 84 0 chrX 40973653 40973784 -125676512 - L1_Mur1 LINE L1 -1721 4165 4024 6 897 1793 282 23 13 chrX 40973786 40974271 -125676025 + ORR1D-int LTR MaLR 331 958 -622 6 897 1215 204 0 0 chrX 40974283 40974504 -125675792 - URR1A DNA MER1_type 0 226 6 6 897 1019 312 17 17 chrX 40974510 40974856 -125675440 + ORR1D1-int LTR MaLR 830 1175 -195 6 897 5813 131 84 18 chrX 40974856 40975933 -125674363 - Lx LINE L1 -22 6632 5489 6 897 483 282 49 7 chrX 40975934 40976077 -125674219 + ORR1D1 LTR MaLR 226 374 0 6 897 593 371 47 6 chrX 40976086 40976449 -125673847 + Lx8 LINE L1 6967 7344 -129 6 897 807 40 0 0 chrX 40976759 40976858 -125673438 + (CATATA)n Simple_repeat Simple_repeat 2 100 0 6 897 1764 151 0 3 chrX 40977018 40977311 -125672985 + Lx LINE L1 6363 6654 0 6 897 4753 51 2 3 chrX 40977342 40977934 -125672362 + L1Md_F2 LINE L1 5980 6570 -12 6 897 873 120 0 0 chrX 40978397 40978522 -125671774 + B1_Mus1 SINE Alu 1 125 -23 6 897 507 243 14 21 chrX 40978522 40978539 -125671757 + ID_B1 SINE B4 82 222 -2 6 897 34719 4 0 0 chrX 40978539 40982479 -125667817 + L1Md_A LINE L1 1647 5586 -297 7 897 9005 3 0 0 chrX 40982479 40983475 -125666821 + L1Md_A LINE L1 5587 6582 0 7 897 1151 75 7 0 chrX 40983493 40983640 -125666656 + B1_Mus1 SINE Alu 1 148 0 7 897 243 0 0 0 chrX 40983651 40983678 -125666618 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 7 897 883 317 94 54 chrX 40983683 40984130 -125666166 + LTR55 LTR ERV 1 465 -83 7 897 32 0 0 0 chrX 40984810 40984842 -125665454 + AT_rich Low_complexity Low_complexity 1 32 0 7 897 243 290 59 45 chrX 40985014 40985216 -125665080 + L1MA6 LINE L1 6025 6229 -71 7 897 4427 166 43 19 chrX 40985587 40986442 -125663854 - Lx2B LINE L1 -335 5551 4676 7 897 8495 157 14 2 chrX 40986441 40987896 -125662400 + Lx2B LINE L1 5532 7000 0 7 897 4780 198 62 24 chrX 40988344 40989431 -125660865 + Lx3C LINE L1 5847 6974 -2 7 897 31 21 0 20 chrX 40989431 40989461 -125660835 + AT_rich Low_complexity Low_complexity 1 30 0 7 897 2060 161 48 0 chrX 40989461 40989833 -125660463 - Lx3B LINE L1 -5 6968 6579 7 897 31 21 0 20 chrX 40989833 40989851 -125660445 + AT_rich Low_complexity Low_complexity 1 18 0 7 897 525 149 0 0 chrX 40989893 40989980 -125660316 + MTC LTR MaLR 1 87 -334 7 897 714 243 46 46 chrX 40989988 40990182 -125660114 + MTC LTR MaLR 228 421 0 7 897 369 0 0 0 chrX 40990739 40990780 -125659516 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 7 897 738 51 10 0 chrX 40990795 40990893 -125659403 - B1_Mus2 SINE Alu 0 147 49 7 897 351 0 0 0 chrX 40990933 40990972 -125659324 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 7 897 13706 187 54 16 chrX 40990972 40994932 -125655364 - Lx5 LINE L1 -3 7047 2923 7 897 2049 144 12 0 chrX 40994932 40995252 -125655044 + ORR1A3 LTR MaLR 1 324 -2 7 897 9888 164 18 65 chrX 40995254 40996246 -125654050 + ORR1A3-int LTR MaLR 1 890 -1073 7 897 495 0 0 0 chrX 40996246 40996301 -125653995 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 897 9888 164 18 65 chrX 40996301 40997283 -125653013 + ORR1A3-int LTR MaLR 891 1883 -80 7 897 2549 67 3 0 chrX 40997283 40997612 -125652684 - L1Md_F2 LINE L1 -12 6570 6241 7 897 9888 164 18 65 chrX 40997612 40997694 -125652602 + ORR1A3-int LTR MaLR 1884 1961 -2 7 897 1844 164 6 3 chrX 40997695 40998012 -125652284 + ORR1A3 LTR MaLR 1 318 -8 7 897 7801 173 35 36 chrX 40998017 40999788 -125650508 - Lx5 LINE L1 -2951 2926 1157 7 897 583 208 54 43 chrX 40999813 40999999 -125650297 - RLTRETN_Mm LTR ERVK 0 322 135 7 897 227 321 101 0 chrX 41000038 41000147 -125650149 - RLTR9E LTR ERVK -289 120 1 1 897 669 222 96 0 chrX 41000147 41000189 -125650107 - L1_Mur2 LINE L1 -5997 715 673 2 897 261 0 0 0 chrX 41000189 41000218 -125650078 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 897 669 222 96 0 chrX 41000218 41000342 -125649954 - L1_Mur2 LINE L1 -6040 672 534 2 897 331 291 22 36 chrX 41000832 41000971 -125649325 - L1M2 LINE L1 -499 5798 5662 4 897 256 310 0 39 chrX 41000969 41001073 -125649223 + L1M4 LINE L1 4841 4940 -1206 5 897 413 133 13 0 chrX 41001258 41001333 -125648963 + (GAAA)n Simple_repeat Simple_repeat 3 78 0 6 897 309 51 0 0 chrX 41001331 41001370 -125648926 + (GGGA)n Simple_repeat Simple_repeat 3 41 0 7 897 505 316 5 26 chrX 41001552 41001747 -125648549 - Lx7 LINE L1 -617 7079 6889 8 897 323 344 118 27 chrX 41001741 41002070 -125648226 + Lx8 LINE L1 7115 7473 0 9 897 21 71 0 0 chrX 41002648 41002690 -125647606 + AT_rich Low_complexity Low_complexity 1 42 0 1 897 2331 139 13 3 chrX 41003362 41003743 -125646553 + Lx LINE L1 6269 6653 -1 1 897 934 291 38 30 chrX 41003881 41003935 -125646361 + ORR1D2 LTR MaLR 30 83 -287 1 897 3129 3 0 6 chrX 41003935 41004283 -125646013 - ORR1A0 LTR MaLR 0 346 1 1 897 934 291 38 30 chrX 41004283 41004490 -125645806 + ORR1D2 LTR MaLR 84 293 -77 1 897 2280 107 6 22 chrX 41004586 41004950 -125645346 + L1_Mus3 LINE L1 6278 6635 -3 1 897 1092 227 12 29 chrX 41004965 41005104 -125645192 + ORR1B2 LTR MaLR 13 151 -216 1 897 1194 64 0 0 chrX 41005104 41005260 -125645036 + (TC)n Simple_repeat Simple_repeat 1 156 0 1 897 1092 227 12 29 chrX 41005260 41005360 -125644936 + ORR1B2 LTR MaLR 152 247 -120 1 897 250 312 54 94 chrX 41005383 41005606 -125644690 - RLTR41 LTR ERV1 -45 401 188 1 897 306 214 14 14 chrX 41005925 41005996 -125644300 + ORR1B2 LTR MaLR 246 316 -51 1 897 2773 207 48 65 chrX 41006104 41006873 -125643423 - RMER6A LTR ERVK 0 756 1 1 897 309 323 10 40 chrX 41007129 41007229 -125643067 - Cheshire DNA MER1_type -2146 274 178 1 897 290 338 81 22 chrX 41007373 41007509 -125642787 - ID_B1 SINE B4 -2 222 79 2 897 21 36 0 0 chrX 41007510 41007538 -125642758 + AT_rich Low_complexity Low_complexity 1 28 0 2 897 204 216 0 0 chrX 41007563 41007614 -125642682 + T-rich Low_complexity Low_complexity 1 51 0 2 897 38109 43 0 3 chrX 41007646 41014074 -125636222 - L1Md_T LINE L1 0 6585 78 2 897 806 106 146 0 chrX 41014095 41014218 -125636078 - B1_Mm SINE Alu -6 141 1 2 897 7960 60 1 0 chrX 41014221 41015321 -125634975 - L1_Mus1 LINE L1 0 6567 5467 2 897 2273 132 5 11 chrX 41015319 41015688 -125634608 - Lx LINE L1 -41 6613 6247 2 897 254 348 77 30 chrX 41016172 41016341 -125633955 - MLT1A1 LTR MaLR -5 403 227 2 897 1016 365 56 61 chrX 41016554 41017163 -125633133 - MLT-int LTR MaLR -42 1693 1088 2 897 240 374 19 0 chrX 41017347 41017454 -125632842 - MLT-int LTR MaLR -942 793 685 2 897 30 45 0 0 chrX 41017584 41017628 -125632668 + AT_rich Low_complexity Low_complexity 1 44 0 2 897 360 0 0 0 chrX 41017679 41017719 -125632577 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 897 26 0 0 0 chrX 41018172 41018198 -125632098 + AT_rich Low_complexity Low_complexity 1 26 0 3 897 1471 291 38 43 chrX 41019121 41019451 -125630845 + Lx9 LINE L1 6813 7139 -505 3 897 3272 45 0 0 chrX 41019451 41019851 -125630445 + L1Md_T LINE L1 6182 6581 -1 3 897 1471 291 38 43 chrX 41019851 41020178 -125630118 + Lx9 LINE L1 7140 7466 -178 3 897 321 234 28 45 chrX 41020184 41020363 -125629933 + (TATAA)n Simple_repeat Simple_repeat 3 178 0 3 897 273 267 68 8 chrX 41020379 41020496 -125629800 + Lx9 LINE L1 7490 7613 -31 3 897 3577 71 0 0 chrX 41021280 41021733 -125628563 - L1_Mus1 LINE L1 -2 6565 6113 3 897 21 36 0 0 chrX 41022075 41022103 -125628193 + AT_rich Low_complexity Low_complexity 1 28 0 3 897 376 278 116 1 chrX 41022414 41022541 -125627755 - MTD LTR MaLR -243 178 37 3 897 22 35 0 0 chrX 41022715 41022744 -125627552 + AT_rich Low_complexity Low_complexity 1 29 0 3 897 1681 197 21 3 chrX 41023824 41024200 -125626096 - Lx LINE L1 -7 6647 6265 3 897 476 297 55 32 chrX 41024797 41025107 -125625189 - L1ME2z LINE L1 -106 6338 6022 4 897 339 324 14 0 chrX 41025239 41025384 -125624912 - L1M5 LINE L1 -619 5555 5409 4 112 5243 141 44 3 chrX 41025384 41026267 -125624029 - Lx2A1 LINE L1 -6 7002 6084 4 898 327 113 0 0 chrX 41026277 41026330 -125623966 + (T)n Simple_repeat Simple_repeat 1 53 0 4 898 37758 33 1 1 chrX 41026334 41033827 -125616469 - L1Md_T LINE L1 0 6585 1 4 898 928 150 0 23 chrX 41033821 41033992 -125616304 - Lx2A1 LINE L1 -925 6083 5917 4 898 195 69 0 0 chrX 41034016 41034045 -125616251 + (T)n Simple_repeat Simple_repeat 1 29 0 4 898 11590 132 9 10 chrX 41034315 41037058 -125613238 + L1_Mus4 LINE L1 3899 6636 0 4 898 25 51 0 0 chrX 41037093 41037132 -125613164 + AT_rich Low_complexity Low_complexity 1 39 0 4 898 335 358 68 37 chrX 41037167 41037424 -125612872 - L1M5 LINE L1 -1199 4947 4678 4 898 1947 124 40 31 chrX 41037424 41037748 -125612548 - ORR1A2 LTR MaLR 0 327 1 4 898 335 358 68 38 chrX 41037748 41037784 -125612512 - L1M5 LINE L1 -1469 4677 4644 4 898 330 26 0 0 chrX 41037826 41037865 -125612431 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 898 1524 63 0 5 chrX 41038038 41038230 -125612066 + B2_Mm2 SINE B2 1 191 -4 5 898 291 28 0 0 chrX 41038455 41038491 -125611805 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 898 793 333 64 32 chrX 41038495 41038870 -125611426 - Lx8 LINE L1 -50 7423 7037 5 898 822 48 0 0 chrX 41039241 41039344 -125610952 + (TA)n Simple_repeat Simple_repeat 2 104 0 5 898 423 0 0 0 chrX 41042656 41042703 -125607593 + (TAAAA)n Simple_repeat Simple_repeat 2 48 0 5 898 234 303 26 13 chrX 41043196 41043273 -125607023 + L1M4c LINE L1 365 442 -6165 5 898 218 241 0 49 chrX 41043668 41043729 -125606567 + T-rich Low_complexity Low_complexity 2 59 0 5 898 274 299 115 40 chrX 41043742 41044090 -125606206 + L1M4c LINE L1 936 1309 -5336 5 898 284 155 48 30 chrX 41044118 41044284 -125606012 + (TA)n Simple_repeat Simple_repeat 1 169 0 5 898 500 30 15 0 chrX 41044382 41044448 -125605848 + (TA)n Simple_repeat Simple_repeat 2 68 0 5 898 365 351 72 14 chrX 41044472 41044680 -125605616 + L1M4c LINE L1 1397 1616 -5133 5 898 456 19 0 0 chrX 41044864 41044917 -125605379 + (T)n Simple_repeat Simple_repeat 1 53 0 5 898 26230 118 19 13 chrX 41044968 41046545 -125603751 + L1Md_F2 LINE L1 383 1965 -3918 6 898 232 27 54 0 chrX 41046545 41046582 -125603714 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 898 26230 93 4 4 chrX 41046582 41049617 -125600679 + L1Md_F2 LINE L1 1966 5005 -878 6 898 1739 80 0 0 chrX 41049617 41049842 -125600454 + L1Md_F2 LINE L1 5360 5584 -299 6 898 7120 76 20 11 chrX 41049844 41050830 -125599466 + L1Md_F2 LINE L1 5587 6581 -1 6 898 482 22 21 52 chrX 41051102 41051199 -125599097 + (TTTTG)n Simple_repeat Simple_repeat 2 95 0 6 898 2001 106 21 60 chrX 41051263 41051595 -125598701 + ORR1A2 LTR MaLR 1 319 -8 6 898 8613 165 71 73 chrX 41051599 41052030 -125598266 + ORR1A2-int LTR MaLR 1 422 -1541 6 898 234 0 0 0 chrX 41052030 41052056 -125598240 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 898 8613 165 71 73 chrX 41052056 41052596 -125597700 + ORR1A2-int LTR MaLR 423 1034 -929 6 898 1157 62 7 0 chrX 41052596 41052741 -125597555 + B1_Mus1 SINE Alu 3 148 0 6 898 8613 165 71 73 chrX 41052741 41053733 -125596563 + ORR1A2-int LTR MaLR 1035 1960 -3 6 898 2004 142 32 0 chrX 41053735 41054044 -125596252 + ORR1A2 LTR MaLR 1 319 -8 6 898 329 359 0 0 chrX 41054383 41054475 -125595821 + B3A SINE B2 26 117 -81 6 898 357 62 0 0 chrX 41054534 41054582 -125595714 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 898 6979 81 16 19 chrX 41054627 41055259 -125595037 - L1_Mus1 LINE L1 0 6570 5954 6 898 423 0 0 0 chrX 41055259 41055306 -125594990 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 898 28581 120 9 12 chrX 41055306 41060006 -125590290 - L1_Mus1 LINE L1 -617 5953 1260 6 898 11085 47 1 1 chrX 41060008 41062054 -125588242 - L1Md_F2 LINE L1 0 6582 4535 7 898 2833 185 41 22 chrX 41062054 41062747 -125587549 - L1_Mus1 LINE L1 -5395 1265 542 6 898 955 98 5 3 chrX 41062802 41062954 -125587342 + Lx2 LINE L1 6380 6508 -489 7 898 534 82 12 0 chrX 41062958 41063043 -125587253 + Lx2 LINE L1 6912 6997 0 7 898 393 345 73 17 chrX 41065102 41065335 -125584961 - MIR SINE MIR 0 262 17 7 898 26 30 0 0 chrX 41065354 41065387 -125584909 + AT_rich Low_complexity Low_complexity 1 33 0 7 898 2250 110 3 0 chrX 41065604 41065922 -125584374 + ORR1A2 LTR MaLR 1 319 -8 7 898 466 185 41 16 chrX 41066140 41066261 -125584035 - Lx6 LINE L1 -4 7456 7333 7 898 316 271 40 91 chrX 41066718 41066908 -125583388 + L1M4c LINE L1 2309 2489 -3890 7 898 958 295 3 35 chrX 41066927 41067243 -125583053 + Lx9 LINE L1 6871 7176 -468 7 898 288 91 0 0 chrX 41067431 41067475 -125582821 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 898 416 271 64 26 chrX 41067625 41067890 -125582406 + L1M4c LINE L1 2498 2772 -3607 7 898 351 277 135 21 chrX 41067933 41068055 -125582241 + L1M2 LINE L1 2323 2466 -3677 7 898 279 54 0 0 chrX 41068055 41068092 -125582204 + (TA)n Simple_repeat Simple_repeat 2 38 0 8 898 351 277 135 21 chrX 41068092 41068161 -125582135 + L1M2 LINE L1 2467 2535 -3608 7 898 371 252 55 58 chrX 41068286 41068516 -125581780 + L1M2 LINE L1 5676 5885 -412 8 898 517 176 57 4 chrX 41068508 41068650 -125581646 - Lx5 LINE L1 -1060 5998 5855 8 898 380 162 239 18 chrX 41068653 41068766 -125581530 + Lx5 LINE L1 6912 7049 -1 8 898 441 282 29 44 chrX 41069007 41069144 -125581152 - B1F SINE Alu -1 148 14 8 898 287 51 0 49 chrX 41069184 41069225 -125581071 - U2 snRNA snRNA -149 39 1 8 898 24 0 0 0 chrX 41069495 41069519 -125580777 + AT_rich Low_complexity Low_complexity 1 24 0 8 898 2102 94 138 0 chrX 41069657 41069977 -125580319 + Lx LINE L1 6285 6648 -6 8 898 1004 151 0 6 chrX 41070295 41070475 -125579821 + CT-rich Low_complexity Low_complexity 1 179 0 8 898 489 176 0 21 chrX 41070590 41070683 -125579613 - L1_Mm LINE L1 -354 5529 5439 8 898 3004 82 5 43 chrX 41070684 41071127 -125579169 - L1_Mus2 LINE L1 0 6566 6141 9 898 1200 41 0 0 chrX 41071131 41071277 -125579019 - L1_Mus2 LINE L1 -622 5944 5799 9 898 22 0 0 0 chrX 41071314 41071336 -125578960 + AT_rich Low_complexity Low_complexity 1 22 0 9 898 5150 202 38 42 chrX 41071336 41072562 -125577734 + Lx2B LINE L1 5780 6999 -1 9 898 246 265 0 56 chrX 41072617 41072689 -125577607 + RMER15 LTR ERVL 3 70 -505 9 898 1178 254 190 24 chrX 41072781 41073242 -125577054 + RMER15 LTR ERVL 39 575 0 9 898 612 285 109 22 chrX 41073470 41074078 -125576218 + L1M4 LINE L1 4770 5434 -740 9 898 2086 203 60 7 chrX 41074258 41074775 -125575521 + Lx4B LINE L1 6285 6823 -177 9 898 337 267 19 9 chrX 41074751 41074857 -125575439 + Lx4B LINE L1 6931 7037 -21 9 898 234 0 0 0 chrX 41074857 41074883 -125575413 + (CTAA)n Simple_repeat Simple_repeat 2 27 0 9 898 587 183 0 15 chrX 41075015 41075148 -125575148 + Lx9 LINE L1 7501 7631 -13 9 898 23 54 0 0 chrX 41075148 41075185 -125575111 + AT_rich Low_complexity Low_complexity 1 37 0 9 898 237 350 62 0 chrX 41076197 41076277 -125574019 - Lx8 LINE L1 -153 7320 7236 9 898 1157 265 91 148 chrX 41076295 41076836 -125573460 - MT2A LTR ERVL -2 531 22 1 898 289 305 0 79 chrX 41076738 41076852 -125573444 - MTE2b LTR MaLR -264 115 11 1 898 374 269 45 36 chrX 41076852 41076964 -125573332 - Lx8 LINE L1 -251 7222 7110 9 898 764 147 7 0 chrX 41077019 41077155 -125573141 + (CTA)n Simple_repeat Simple_repeat 1 137 0 1 898 517 252 54 54 chrX 41077731 41077899 -125572397 - MTE2b LTR MaLR -208 171 4 1 898 386 348 43 111 chrX 41078576 41078655 -125571641 - LTR53 LTR ERVL -28 491 419 1 898 1637 50 0 14 chrX 41078655 41078877 -125571419 + L1Md_A LINE L1 6364 6582 0 1 898 386 348 43 111 chrX 41078877 41079149 -125571147 - LTR53 LTR ERVL -101 418 164 1 898 1283 280 71 34 chrX 41079174 41079611 -125570685 + Lx6 LINE L1 7008 7460 0 1 898 975 165 80 33 chrX 41079603 41079878 -125570418 + Lx9 LINE L1 7350 7637 -7 1 898 342 384 7 7 chrX 41079881 41080028 -125570268 - LTR53 LTR ERVL -343 176 30 1 898 335 305 38 15 chrX 41080456 41080589 -125569707 - LTR52-int LTR ERVL -183 3373 3238 1 898 216 0 0 0 chrX 41080721 41080745 -125569551 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 898 288 0 0 0 chrX 41080745 41080776 -125569520 + (GA)n Simple_repeat Simple_repeat 2 33 0 1 898 225 409 16 0 chrX 41081102 41081229 -125569067 + Lx8 LINE L1 7154 7282 -191 1 898 302 288 136 0 chrX 41081278 41081396 -125568900 + HAL1-3A_ME LINE L1 1990 2123 -735 1 898 23 0 0 0 chrX 41081766 41081789 -125568507 + AT_rich Low_complexity Low_complexity 1 23 0 1 898 678 143 0 19 chrX 41081841 41081948 -125568348 - B3 SINE B2 -105 111 7 1 898 288 0 0 0 chrX 41082314 41082346 -125567950 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 898 412 286 67 31 chrX 41082830 41083025 -125567271 - HERVL74-int LTR ERVL -3985 1700 1499 1 898 1375 265 3 7 chrX 41083667 41083971 -125566325 - MTC LTR MaLR -10 411 109 1 898 4501 91 22 0 chrX 41083972 41084602 -125565694 + L1_Mus2 LINE L1 5922 6565 -1 1 898 225 94 0 0 chrX 41084670 41084702 -125565594 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1 898 1112 148 6 6 chrX 41084702 41084879 -125565417 - B2_Mm2 SINE B2 -18 177 1 1 898 460 87 0 0 chrX 41084904 41084973 -125565323 - L1Md_F2 LINE L1 -12 6570 6502 1 898 1610 131 124 0 chrX 41084976 41085267 -125565029 + IAPEY3_LTR LTR ERVK 1 327 -5 1 898 819 125 6 106 chrX 41085269 41085430 -125564866 + IAPLTR4_I LTR ERVK 21 165 -1305 1 898 1050 137 65 32 chrX 41085429 41085759 -125564537 + IAPEY3-int LTR ERVK 538 952 -6629 1 898 1668 189 120 25 chrX 41085881 41086377 -125563919 + RMER16-int LTR ERVK 192 663 -5474 1 898 271 211 58 0 chrX 41086371 41086423 -125563873 + RMER16-int LTR ERVK 950 1004 -983 1 898 451 316 31 23 chrX 41086576 41086832 -125563464 + RMER16-int LTR ERVK 1309 1566 -6015 1 898 312 164 36 0 chrX 41086849 41086904 -125563392 + IAP-d-int LTR ERVK 447 503 -6039 1 898 1337 141 97 0 chrX 41086904 41087131 -125563165 + IAP-d-int LTR ERVK 5007 5255 -1287 1 898 1656 160 22 16 chrX 41087128 41087445 -125562851 + IAPEY3-int LTR ERVK 6989 7307 -373 1 898 1331 182 64 29 chrX 41087480 41087825 -125562471 + IAP-d-int LTR ERVK 6125 6481 0 1 898 1628 134 124 0 chrX 41087825 41088116 -125562180 + IAPEY3_LTR LTR ERVK 1 327 -5 1 898 7307 60 3 4 chrX 41088119 41089373 -125560923 - L1Md_F2 LINE L1 -76 6506 5255 1 898 1855 93 0 0 chrX 41089372 41089629 -125560667 + L1Md_F2 LINE L1 4986 5242 -641 1 898 809 168 34 34 chrX 41089643 41089822 -125560474 - B2_Mm2 SINE B2 -14 181 3 1 898 354 296 14 56 chrX 41089839 41089982 -125560314 - Lx6 LINE L1 -17 7443 7307 1 898 1894 222 142 2 chrX 41089979 41090435 -125559861 - Lx6 LINE L1 -289 7171 6652 1 898 403 319 27 14 chrX 41090435 41090581 -125559715 + RLTR22_Mur LTR ERVK 1 148 -1700 1 898 778 234 181 82 chrX 41090615 41090862 -125559434 - RLTR20B2 LTR ERVK -171 389 117 1 898 5856 157 17 16 chrX 41090862 41091886 -125558410 - Lx2 LINE L1 -1 6996 5972 1 898 778 234 181 82 chrX 41091886 41091992 -125558304 - RLTR20B2 LTR ERVK -444 116 2 1 898 2461 210 31 37 chrX 41091993 41092593 -125557703 + RLTR22_Mur LTR ERVK 140 746 -1102 1 898 1045 116 6 6 chrX 41092593 41092767 -125557529 + (GAAA)n Simple_repeat Simple_repeat 1 174 0 1 898 2461 210 31 37 chrX 41092767 41092810 -125557486 + RLTR22_Mur LTR ERVK 747 779 -1069 1 898 194 155 35 0 chrX 41092827 41092885 -125557411 + (CATTA)n Simple_repeat Simple_repeat 2 61 0 1 898 260 306 73 68 chrX 41093079 41093269 -125557027 + RLTR22_Mus LTR ERVK 1483 1644 -164 1 898 206 77 51 0 chrX 41093274 41093313 -125556983 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 898 4047 249 39 11 chrX 41093401 41094430 -125555866 - Lx6 LINE L1 -803 6657 5600 1 898 667 179 0 0 chrX 41094437 41094543 -125555753 + L1_Mur3 LINE L1 5489 5594 -286 1 898 272 218 0 0 chrX 41094553 41094608 -125555688 - MTC LTR MaLR -355 66 12 1 898 719 366 67 53 chrX 41095240 41095750 -125554546 - LTR53 LTR ERVL 0 519 3 1 898 284 299 10 10 chrX 41097035 41097133 -125553163 - MLT1A0 LTR MaLR -267 98 1 1 898 196 335 77 42 chrX 41097447 41097615 -125552681 - MIR SINE MIR -2 260 87 1 898 5466 118 50 2 chrX 41097615 41098449 -125551847 - Lx2 LINE L1 -1 6996 6123 1 898 1285 139 53 25 chrX 41098449 41098693 -125551603 + Lx2 LINE L1 5841 6091 -906 1 898 318 302 216 15 chrX 41099439 41099812 -125550484 - L1M4 LINE L1 -3339 3305 2857 1 898 449 339 0 0 chrX 41099825 41099943 -125550353 - B3 SINE B2 -98 118 1 1 898 322 347 70 37 chrX 41099948 41100247 -125550049 - L1M4 LINE L1 -4543 2103 1795 1 898 557 118 59 0 chrX 41100309 41100411 -125549885 - Lx LINE L1 -2 6652 6545 1 898 3302 117 2 6 chrX 41100411 41100908 -125549388 - Lx LINE L1 -410 6244 5750 1 898 249 32 0 0 chrX 41100907 41100938 -125549358 + MusHAL1 LINE L1 2150 2180 -532 1 898 35 0 0 0 chrX 41100938 41100973 -125549323 + AT_rich Low_complexity Low_complexity 1 35 0 1 898 2215 73 0 26 chrX 41101067 41101375 -125548921 + L1_Mus3 LINE L1 5819 6118 -520 1 898 362 343 0 56 chrX 41102333 41102549 -125547747 - L1M4 LINE L1 -6185 357 154 1 898 315 309 21 62 chrX 41102608 41102624 -125547672 - CYRA11_Mm Unknown Y-chromosome -275 342 253 1 898 868 180 0 12 chrX 41102624 41102787 -125547509 + URR1B DNA MER1_type 65 225 0 1 898 315 309 21 62 chrX 41102787 41102801 -125547495 - CYRA11_Mm Unknown Y-chromosome -275 252 158 1 898 2213 89 97 38 chrX 41102872 41103211 -125547085 + RLTR10D LTR ERVK 1 359 0 1 898 379 324 56 26 chrX 41103332 41103563 -125546733 - L1ME1 LINE L1 -232 5947 5710 1 898 354 262 22 1 chrX 41103564 41103679 -125546617 + Lx8 LINE L1 6760 6862 -611 1 898 903 292 24 19 chrX 41103805 41104018 -125546278 + B3 SINE B2 2 215 -1 1 898 304 279 156 0 chrX 41104081 41104203 -125546093 + L1MD LINE L1 4410 4550 -1596 1 898 6597 121 40 12 chrX 41104207 41105244 -125545052 - Lx3A LINE L1 -240 6741 5675 1 898 836 317 48 19 chrX 41106014 41106045 -125544251 + L1MB7 LINE L1 5439 5469 -715 1 898 261 139 0 0 chrX 41106045 41106088 -125544208 + (CAT)n Simple_repeat Simple_repeat 2 44 0 1 898 836 317 48 19 chrX 41106088 41106580 -125543716 + L1MB7 LINE L1 5470 5976 -208 1 898 6743 96 9 1 chrX 41106641 41107597 -125542699 + L1Md_F2 LINE L1 4623 5586 -297 1 898 7455 73 7 3 chrX 41107597 41108588 -125541708 + L1Md_F2 LINE L1 5587 6581 -1 1 898 671 223 143 0 chrX 41108659 41108834 -125541462 + MTD LTR MaLR 157 356 -63 1 898 259 267 29 38 chrX 41108929 41109034 -125541262 + MTD LTR MaLR 311 414 -5 1 898 272 200 0 121 chrX 41109104 41109195 -125541101 + L1MB7 LINE L1 6085 6164 -10 1 898 358 309 71 24 chrX 41110017 41110143 -125540153 + AmnSINE1 SINE SINE 359 490 -85 1 898 31512 77 2 7 chrX 41110414 41112016 -125538280 + L1Md_F2 LINE L1 370 1961 -3922 1 898 504 32 0 0 chrX 41112016 41112078 -125538218 + (CAAAA)n Simple_repeat Simple_repeat 4 65 0 1 898 31512 83 4 1 chrX 41112078 41115687 -125534609 + L1Md_F2 LINE L1 1962 5585 -298 1 898 8028 43 5 1 chrX 41115688 41116677 -125533619 + L1Md_F2 LINE L1 5587 6579 -3 1 898 3364 213 27 4 chrX 41117350 41118099 -125532197 - Lx2B LINE L1 0 7000 6235 1 898 520 228 145 80 chrX 41118970 41119158 -125531138 - RMER1B Other Other -16 1050 868 1 898 1605 257 37 69 chrX 41119197 41119371 -125530925 - RMER1B Other Other -293 773 624 1 898 1247 27 0 0 chrX 41119371 41119518 -125530778 - B1_Mm SINE Alu 0 147 1 1 898 1605 261 38 71 chrX 41119518 41119833 -125530463 - RMER1B Other Other -443 623 240 1 898 911 202 59 20 chrX 41120244 41120446 -125529850 - B3 SINE B2 -5 211 2 1 898 37946 34 0 0 chrX 41120534 41125932 -125524364 - L1Md_T LINE L1 0 6582 1185 1 898 1300 65 12 0 chrX 41125932 41126102 -125524194 - MT2C_Mm LTR ERVL -303 172 1 1 898 268 216 95 95 chrX 41126102 41126158 -125524138 - ORR1A3-int LTR MaLR -1350 613 558 1 898 319 167 26 53 chrX 41126140 41126216 -125524080 - ORR1A3-int LTR MaLR -1323 640 567 1 898 6194 65 0 0 chrX 41126216 41126995 -125523301 - MERVL-int LTR ERVL -114 5371 4593 1 898 515 51 12 60 chrX 41126979 41127062 -125523234 - MERVL-int LTR ERVL -5406 79 1 1 898 3566 77 19 0 chrX 41127062 41127528 -125522768 - MT2C_Mm LTR ERVL 0 475 1 1 898 240 154 0 0 chrX 41127531 41127570 -125522726 + Lx7 LINE L1 6317 6355 -1341 1 898 1826 207 73 13 chrX 41127570 41127967 -125522329 + MTC LTR MaLR 1 421 0 1 898 3922 258 44 11 chrX 41127967 41129014 -125521282 + Lx7 LINE L1 6351 7432 -264 1 898 24 32 0 0 chrX 41129387 41129418 -125520878 + AT_rich Low_complexity Low_complexity 1 31 0 1 898 27 81 0 0 chrX 41129549 41129611 -125520685 + AT_rich Low_complexity Low_complexity 1 62 0 1 898 2395 76 22 0 chrX 41129929 41130244 -125520052 - L1_Mm LINE L1 -129 5754 5433 1 898 1456 86 10 0 chrX 41130244 41130453 -125519843 + L1_Mus2 LINE L1 6356 6566 0 1 898 701 215 63 11 chrX 41130794 41130968 -125519328 - MTD LTR MaLR -14 405 223 1 898 242 366 0 0 chrX 41131054 41131136 -125519160 - PB1D10 SINE Alu 0 117 36 1 898 3807 61 12 2 chrX 41131516 41132010 -125518286 - L1Md_F2 LINE L1 0 6582 6084 1 898 456 51 0 0 chrX 41132095 41132154 -125518142 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 898 522 107 0 0 chrX 41132312 41132387 -125517909 - Lx3_Mus LINE L1 -307 6702 6628 1 898 303 129 0 16 chrX 41132387 41132450 -125517846 + Lx3A LINE L1 6919 6980 -1 1 898 1578 193 9 3 chrX 41134330 41134658 -125515638 - L1_Mur1 LINE L1 -386 5491 5162 1 898 1990 186 0 0 chrX 41134656 41134994 -125515302 + L1_Mur1 LINE L1 5509 5846 -40 1 898 3576 212 13 48 chrX 41135429 41135674 -125514622 + Lx6 LINE L1 5055 5288 -592 1 898 893 157 12 6 chrX 41135674 41135841 -125514455 + L1_Mus3 LINE L1 6464 6631 -7 1 898 3576 240 30 62 chrX 41135841 41137107 -125513189 + Lx6 LINE L1 5289 6753 -707 1 898 198 0 0 0 chrX 41137107 41137129 -125513167 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1 898 1434 274 54 3 chrX 41137129 41137179 -125513117 + Lx6 LINE L1 6754 6802 -658 1 898 1198 254 10 104 chrX 41137176 41137580 -125512716 + Lx6 LINE L1 7091 7456 -4 1 898 23 0 0 0 chrX 41138076 41138099 -125512197 + AT_rich Low_complexity Low_complexity 1 23 0 1 898 31 58 0 0 chrX 41138774 41138826 -125511470 + AT_rich Low_complexity Low_complexity 1 52 0 1 898 29 0 0 0 chrX 41139832 41139861 -125510435 + AT_rich Low_complexity Low_complexity 1 29 0 1 898 529 345 123 61 chrX 41139907 41140314 -125509982 - MLT1F LTR MaLR 0 548 117 1 898 886 220 79 15 chrX 41140553 41140756 -125509540 - B3 SINE B2 0 216 1 1 898 22 35 0 0 chrX 41141437 41141466 -125508830 + AT_rich Low_complexity Low_complexity 1 29 0 1 898 23316 119 7 21 chrX 41141993 41145331 -125504965 - L1Md_F LINE L1 -922 4961 1677 1 898 207 0 0 0 chrX 41145331 41145354 -125504942 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 898 23316 203 74 59 chrX 41145354 41146814 -125503482 - L1Md_F LINE L1 -4207 1676 220 1 898 907 97 8 0 chrX 41146800 41146924 -125503372 - Lx3_Mus LINE L1 -1213 5796 5672 1 898 1736 140 7 3 chrX 41146927 41147213 -125503083 - Lx3_Mus LINE L1 -699 5187 4901 1 898 4112 151 21 18 chrX 41147213 41147923 -125502373 + Lx3C LINE L1 6263 6974 -2 1 898 22 0 0 0 chrX 41148023 41148045 -125502251 + AT_rich Low_complexity Low_complexity 1 22 0 1 898 366 302 10 0 chrX 41148092 41148188 -125502108 + B1F2 SINE Alu 47 143 -6 1 898 5151 61 5 6 chrX 41148373 41149045 -125501251 + L1Md_F2 LINE L1 4915 5585 -298 2 898 7981 55 2 0 chrX 41149046 41150038 -125500258 + L1Md_F2 LINE L1 5587 6580 -2 2 898 36 70 0 0 chrX 41150733 41150804 -125499492 + AT_rich Low_complexity Low_complexity 1 71 0 2 898 412 195 33 44 chrX 41151083 41151174 -125499122 + B1_Mus2 SINE Alu 8 97 -50 2 898 21 36 0 0 chrX 41151182 41151210 -125499086 + AT_rich Low_complexity Low_complexity 1 28 0 2 898 744 214 55 5 chrX 41151820 41152028 -125498268 - Lx4B LINE L1 -3 7055 6747 2 898 21 57 0 0 chrX 41152835 41152870 -125497426 + AT_rich Low_complexity Low_complexity 1 35 0 2 898 301 299 51 8 chrX 41152873 41152991 -125497305 - MER3 DNA MER1_type -4 205 83 2 898 492 143 0 0 chrX 41153561 41153645 -125496651 + (TA)n Simple_repeat Simple_repeat 1 84 0 2 898 22 35 0 0 chrX 41153805 41153834 -125496462 + AT_rich Low_complexity Low_complexity 1 29 0 2 898 23 43 0 21 chrX 41153894 41153925 -125496371 + AT_rich Low_complexity Low_complexity 1 31 0 2 898 5349 67 7 0 chrX 41153925 41154615 -125495681 + L1_Mus1 LINE L1 5872 6566 -1 2 898 23 43 0 21 chrX 41154615 41154631 -125495665 + AT_rich Low_complexity Low_complexity 1 16 0 2 898 655 321 98 18 chrX 41154773 41155049 -125495247 - MLT2C1 LTR ERVL -61 336 39 2 112 1116 294 45 33 chrX 41156480 41156898 -125493398 + MLT2B4 LTR ERVL 3 414 0 2 899 398 395 77 38 chrX 41157107 41157473 -125492823 + MLT1A1 LTR MaLR 21 400 -8 2 899 727 306 68 21 chrX 41157648 41158032 -125492264 - L1_Mur3 LINE L1 -1797 4083 3682 2 899 5217 158 78 57 chrX 41158121 41159212 -125491084 + RLTR13D3 LTR ERVK 1 1114 0 2 899 6757 129 32 6 chrX 41159228 41160741 -125489555 - L1_Mus3 LINE L1 0 6638 5094 2 899 7329 106 7 0 chrX 41160782 41162000 -125488296 - L1_Mus3 LINE L1 -12 6626 5400 2 899 820 123 6 10 chrX 41162000 41162138 -125488158 + B1_Mus1 SINE Alu 13 147 -1 2 899 477 248 40 52 chrX 41162174 41162348 -125487948 - L1Md_F LINE L1 -5778 741 570 2 899 694 319 52 28 chrX 41162526 41162813 -125487483 + Lx6 LINE L1 7111 7404 -56 2 899 640 313 77 41 chrX 41162862 41163109 -125487187 - L1_Mur3 LINE L1 -177 5703 5419 2 899 315 312 10 59 chrX 41163841 41163943 -125486353 - ID_B1 SINE B4 -29 195 99 2 899 30 59 0 0 chrX 41165814 41165865 -125484431 + AT_rich Low_complexity Low_complexity 1 51 0 2 899 22 80 0 0 chrX 41166033 41166083 -125484213 + AT_rich Low_complexity Low_complexity 1 50 0 2 899 7551 57 16 6 chrX 41166083 41167069 -125483227 - L1Md_F2 LINE L1 0 6582 5587 2 899 778 99 1 22 chrX 41167076 41167195 -125483101 + L1_Mm LINE L1 5480 5620 -2262 2 899 2810 135 18 7 chrX 41167195 41167651 -125482645 - Lx3A LINE L1 -3 6978 6518 2 899 848 314 18 47 chrX 41167672 41168053 -125482243 - Lx9 LINE L1 -247 7397 7028 2 899 2787 179 120 8 chrX 41168070 41168680 -125481616 - RMER6A LTR ERVK -75 681 4 2 899 944 310 245 7 chrX 41168684 41169248 -125481048 - Lx9 LINE L1 -612 7032 6335 2 899 1703 217 69 33 chrX 41169425 41169916 -125480380 - L1_Rod LINE L1 -753 5094 4586 2 899 6291 214 48 11 chrX 41169928 41171272 -125479024 - Lx5 LINE L1 -3 7047 5678 2 899 658 244 39 19 chrX 41171261 41171520 -125478776 - Lx5 LINE L1 -1289 4591 4328 2 899 729 310 12 40 chrX 41171600 41171923 -125478373 - RLTR15 LTR ERVK -45 314 1 2 899 589 263 81 9 chrX 41171924 41172135 -125478161 - L1_Rod LINE L1 -1780 4067 3842 2 899 1312 266 117 19 chrX 41172360 41172823 -125477473 - Lx9 LINE L1 -976 6668 6161 2 899 1921 240 186 3 chrX 41172880 41173449 -125476847 + Lx9 LINE L1 6674 7346 -298 2 899 483 33 0 0 chrX 41173473 41173534 -125476762 + (CA)n Simple_repeat Simple_repeat 1 61 0 2 899 601 322 40 43 chrX 41173802 41174157 -125476139 + RLTR26 LTR ERVK 2 419 -208 2 899 459 0 0 0 chrX 41175447 41175498 -125474798 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 899 22 35 0 0 chrX 41178011 41178040 -125472256 + AT_rich Low_complexity Low_complexity 1 29 0 2 899 21 0 0 0 chrX 41178129 41178150 -125472146 + AT_rich Low_complexity Low_complexity 1 21 0 2 899 543 237 0 33 chrX 41178857 41178979 -125471317 + B3 SINE B2 13 130 -86 2 899 756 280 19 10 chrX 41179019 41179228 -125471068 - B3 SINE B2 -5 211 1 2 899 252 59 0 0 chrX 41179243 41179277 -125471019 + (TAA)n Simple_repeat Simple_repeat 3 36 0 2 899 220 407 42 36 chrX 41179329 41179597 -125470699 - RSINE1 SINE B4 -17 275 2 2 899 2851 25 119 32 chrX 41180602 41180980 -125469316 - IAPLTR2a LTR ERVK 0 411 1 2 899 6295 66 12 4 chrX 41180980 41181802 -125468494 - IAPEz-int LTR ERVK 0 6481 5653 2 899 2625 76 0 3 chrX 41181797 41182140 -125468156 - IAPEz-int LTR ERVK -4781 1700 1359 2 899 3425 93 19 24 chrX 41182142 41182942 -125467354 - IAPEz-int LTR ERVK -5821 660 9 2 899 2818 35 121 16 chrX 41182943 41183315 -125466981 - IAPLTR2a LTR ERVK 0 411 1 2 899 273 300 23 0 chrX 41183371 41183445 -125466851 - B3 SINE B2 -112 83 6 2 899 1089 246 38 103 chrX 41183838 41184178 -125466118 - MTD LTR MaLR -15 404 94 2 899 459 172 11 0 chrX 41184340 41184427 -125465869 - MTD LTR MaLR -331 88 1 2 899 279 189 0 0 chrX 41184431 41184484 -125465812 - MTD-int LTR MaLR -5 1575 1523 2 899 2257 248 55 33 chrX 41184487 41185329 -125464967 + L1_Rod LINE L1 2349 3208 -2639 2 899 282 230 0 0 chrX 41185421 41185495 -125464801 + L1_Rod LINE L1 3199 3272 -2575 2 899 888 74 0 0 chrX 41185495 41185616 -125464680 + B1_Mus1 SINE Alu 28 148 0 2 899 924 237 51 33 chrX 41185619 41185951 -125464345 + L1_Rod LINE L1 3261 3598 -2249 2 899 456 104 0 0 chrX 41185954 41186021 -125464275 + (GGAA)n Simple_repeat Simple_repeat 4 70 0 2 899 336 247 18 85 chrX 41186022 41186186 -125464110 + L1_Rod LINE L1 3590 3746 -2397 2 899 748 270 115 141 chrX 41186186 41186570 -125463726 - ORR1D1 LTR MaLR 0 374 1 2 899 1532 245 55 21 chrX 41186578 41187109 -125463187 + L1_Rod LINE L1 3742 4274 -1573 2 899 2061 159 17 73 chrX 41187154 41187562 -125462734 - ORR1B1 LTR MaLR -8 386 2 2 899 414 0 0 0 chrX 41187629 41187675 -125462621 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 899 1177 309 46 69 chrX 41187696 41188308 -125461988 - Lx8 LINE L1 -550 6923 6326 2 899 422 355 59 14 chrX 41188973 41189193 -125461103 - L1ME3 LINE L1 -278 5884 5655 2 899 434 303 57 19 chrX 41189854 41190012 -125460284 + RSINE1 SINE B4 2 165 0 2 899 202 198 18 62 chrX 41190032 41190145 -125460151 + (TTA)n Simple_repeat Simple_repeat 2 109 0 2 899 459 411 49 0 chrX 41190170 41190474 -125459822 + MLT1A0 LTR MaLR 45 363 -2 2 899 248 347 80 11 chrX 41190504 41190679 -125459617 + MIR SINE MIR 45 231 -31 2 899 743 269 28 19 chrX 41190697 41191015 -125459281 + L1_Rod LINE L1 4946 5266 -874 2 899 372 266 133 46 chrX 41191536 41191903 -125458393 + L1_Rod LINE L1 5386 5784 -384 2 899 1455 217 18 89 chrX 41191918 41192298 -125457998 - ORR1B1 LTR MaLR -1 393 41 2 899 8164 175 56 88 chrX 41192305 41194333 -125455963 - ORR1B1-int LTR MaLR 0 1963 1 2 899 1424 211 44 83 chrX 41194333 41194695 -125455601 - ORR1B1 LTR MaLR 0 394 47 2 899 1565 257 51 5 chrX 41194762 41195176 -125455120 + Lx6 LINE L1 6644 7076 -384 2 899 27 29 0 0 chrX 41195188 41195222 -125455074 + AT_rich Low_complexity Low_complexity 1 34 0 2 899 1792 319 48 25 chrX 41195484 41196483 -125453813 - Lx8 LINE L1 -987 6486 5467 2 899 267 224 0 0 chrX 41196579 41196655 -125453641 + CT-rich Low_complexity Low_complexity 4 79 0 2 899 342 0 0 0 chrX 41196693 41196731 -125453565 + (TTCC)n Simple_repeat Simple_repeat 1 38 0 2 899 638 204 17 17 chrX 41196731 41196910 -125453386 + CT-rich Low_complexity Low_complexity 2 180 0 2 899 439 173 39 67 chrX 41196940 41197046 -125453250 - B1_Mur4 SINE Alu -5 115 10 2 899 31238 101 7 18 chrX 41197162 41200233 -125450063 + L1Md_F2 LINE L1 463 3478 -2405 2 899 309 68 0 0 chrX 41200233 41200277 -125450019 + (CAA)n Simple_repeat Simple_repeat 2 45 0 2 899 31238 79 6 10 chrX 41200277 41202378 -125447918 + L1Md_F2 LINE L1 3479 5584 -299 2 899 6994 94 6 3 chrX 41202379 41203371 -125446925 + L1Md_F2 LINE L1 5588 6582 0 2 899 234 182 0 0 chrX 41203399 41203443 -125446853 - L1_Mur3 LINE L1 -474 5406 5363 2 899 369 0 0 0 chrX 41203951 41203992 -125446304 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 899 261 0 0 0 chrX 41203992 41204020 -125446276 + (GA)n Simple_repeat Simple_repeat 2 30 0 2 899 971 340 91 22 chrX 41204027 41204755 -125445541 - Lx9 LINE L1 -192 7452 6675 2 899 854 291 58 66 chrX 41204766 41205314 -125444982 + L1_Rod LINE L1 5103 5646 -201 2 899 1103 326 29 14 chrX 41205307 41205751 -125444545 - Lx8 LINE L1 -131 7342 6892 2 899 1482 312 81 28 chrX 41205796 41206509 -125443787 - Lx8 LINE L1 -654 6819 6069 2 899 234 236 18 0 chrX 41206796 41206851 -125443445 + B3 SINE B2 152 207 -9 2 899 252 319 0 21 chrX 41207103 41207199 -125443097 - L1M4c LINE L1 -4687 1697 1604 2 899 1704 188 6 6 chrX 41207471 41207797 -125442499 - Lx3A LINE L1 -6 6975 6650 2 899 263 294 30 60 chrX 41208076 41208210 -125442086 - Lx LINE L1 -18 6636 6507 2 899 21 95 0 0 chrX 41208491 41208554 -125441742 + AT_rich Low_complexity Low_complexity 1 63 0 2 899 372 22 0 0 chrX 41209476 41209521 -125440775 + (TC)n Simple_repeat Simple_repeat 1 45 0 2 899 405 0 0 0 chrX 41209861 41209906 -125440390 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 2 899 487 332 95 0 chrX 41209983 41210224 -125440072 - Lx8 LINE L1 -37 7436 7173 2 899 1164 204 44 61 chrX 41210280 41210577 -125439719 + RLTR46 LTR ERVK 24 315 -5 2 899 1816 329 34 24 chrX 41210584 41211459 -125438837 - Lx8 LINE L1 -417 7056 6173 2 899 255 214 13 67 chrX 41211481 41211556 -125438740 - Lx8 LINE L1 -1284 6189 6119 2 899 345 321 46 72 chrX 41212709 41213082 -125437214 - L1MB3 LINE L1 -18 6165 5803 2 899 387 0 0 0 chrX 41213196 41213239 -125437057 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 899 554 299 28 1 chrX 41213245 41213409 -125436887 + Lx9 LINE L1 6484 6794 -850 2 899 4382 212 19 33 chrX 41213412 41214143 -125436153 - L1_Mur2 LINE L1 -3535 2342 1630 2 899 4555 144 19 22 chrX 41214143 41214955 -125435341 + RMER17D2 LTR ERVK 1 809 0 2 899 4382 224 23 28 chrX 41214955 41215699 -125434597 - L1_Mur2 LINE L1 -4248 1629 882 2 899 311 304 94 16 chrX 41216113 41216240 -125434056 + MYSERV-int LTR ERVK 4983 5119 -1431 2 899 463 293 20 95 chrX 41216250 41216450 -125433846 + RMER4A LTR ERVK 254 438 -28 2 899 305 236 0 22 chrX 41216456 41216547 -125433749 + MYSERV-int LTR ERVK 5318 5406 -1144 2 899 346 151 14 0 chrX 41216585 41216658 -125433638 - L1Md_F2 LINE L1 -3 6579 6506 2 899 3611 223 43 58 chrX 41216658 41217758 -125432538 + MYSERV6-int LTR ERVK 7877 8959 0 2 899 669 267 74 59 chrX 41217758 41218096 -125432200 + RLTR15 LTR ERVK 1 343 -16 2 899 336 331 12 64 chrX 41218162 41218333 -125431963 - Lx9 LINE L1 -533 7111 6950 2 899 1384 115 73 91 chrX 41218328 41218614 -125431682 + L1Md_F2 LINE L1 6301 6581 -1 2 899 270 324 0 0 chrX 41218671 41218745 -125431551 - Lx8 LINE L1 -729 6744 6671 2 899 8118 41 1 7 chrX 41218750 41219917 -125430379 - L1Md_F2 LINE L1 -1 6581 5425 2 899 10120 37 0 0 chrX 41219910 41221134 -125429162 + L1_Mm LINE L1 3987 5210 -673 2 899 839 349 20 15 chrX 41221134 41221477 -125428819 - Lx9 LINE L1 -826 6818 6474 2 899 315 356 70 1 chrX 41221780 41222045 -125428251 - L1M1 LINE L1 -449 5842 5563 2 899 21 36 0 0 chrX 41222064 41222092 -125428204 + AT_rich Low_complexity Low_complexity 1 28 0 3 899 347 332 114 37 chrX 41222827 41223099 -125427197 + L3 LINE CR1 3988 4280 -209 3 899 31 36 0 18 chrX 41223438 41223480 -125426816 + AT_rich Low_complexity Low_complexity 1 42 0 3 899 1806 161 22 6 chrX 41223480 41223792 -125426504 - Lx3A LINE L1 -1 6980 6664 3 899 31 36 0 18 chrX 41223792 41223805 -125426491 + AT_rich Low_complexity Low_complexity 1 13 0 3 899 6224 71 8 2 chrX 41223809 41224629 -125425667 - L1_Mus1 LINE L1 0 6567 5743 3 899 604 53 0 0 chrX 41224629 41224705 -125425591 + L1_Mus1 LINE L1 5684 5759 -877 3 899 16319 146 57 26 chrX 41224701 41226078 -125424218 - L1_Mur1 LINE L1 -1137 4749 3276 3 899 2891 98 2 0 chrX 41226078 41226477 -125423819 - MTB LTR MaLR 0 400 1 3 899 6624 114 9 70 chrX 41226477 41227646 -125422650 - MTB-int LTR MaLR 0 1098 1 3 899 16319 136 45 22 chrX 41227646 41230132 -125420164 - L1_Mur1 LINE L1 -2611 3275 784 3 899 627 125 0 0 chrX 41230144 41230232 -125420064 - L1_Mur1 LINE L1 -6687 297 210 3 899 23 0 0 0 chrX 41230325 41230348 -125419948 + AT_rich Low_complexity Low_complexity 1 23 0 3 899 37978 11 0 7 chrX 41230409 41235600 -125414696 + L1Md_A LINE L1 438 5586 -297 3 899 8782 14 0 0 chrX 41235600 41236633 -125413663 + L1Md_A LINE L1 5587 6582 0 3 899 22 56 0 0 chrX 41236780 41236816 -125413480 + AT_rich Low_complexity Low_complexity 1 36 0 3 899 280 303 0 0 chrX 41237432 41237508 -125412788 + CT-rich Low_complexity Low_complexity 1 76 0 3 899 680 35 11 0 chrX 41238760 41238847 -125411449 + (TC)n Simple_repeat Simple_repeat 1 88 0 3 899 22 0 0 0 chrX 41239684 41239706 -125410590 + AT_rich Low_complexity Low_complexity 1 22 0 3 899 24 0 0 0 chrX 41239729 41239753 -125410543 + AT_rich Low_complexity Low_complexity 1 24 0 3 899 5886 61 1 8 chrX 41239861 41240623 -125409673 - L1Md_F2 LINE L1 -8 6574 5818 3 899 3440 19 2 0 chrX 41240623 41241035 -125409261 + L1_Mm LINE L1 4980 5392 -491 3 899 1916 43 8 0 chrX 41241387 41241622 -125408674 - L1Md_F2 LINE L1 -141 6441 6205 3 899 441 154 0 0 chrX 41241612 41241690 -125408606 - L1_Mm LINE L1 -691 5192 5115 3 899 14074 91 10 12 chrX 41241677 41243784 -125406512 - L1_Mm LINE L1 -2165 3718 1615 3 899 25 51 0 0 chrX 41243944 41243983 -125406313 + AT_rich Low_complexity Low_complexity 1 39 0 3 899 720 331 37 75 chrX 41244646 41245021 -125405275 + MTE2b LTR MaLR 18 378 -1 3 899 638 281 78 20 chrX 41245389 41245802 -125404494 + L1_Rod LINE L1 3314 3771 -2369 3 899 592 300 71 0 chrX 41245837 41246007 -125404289 + Lx9 LINE L1 6382 6563 -1081 3 899 13034 178 21 19 chrX 41246001 41249607 -125400689 - Lx2B LINE L1 -216 6784 3166 3 899 7367 83 5 10 chrX 41249626 41250842 -125399454 - L1_Mus1 LINE L1 0 6567 5370 3 899 180 0 0 0 chrX 41250842 41250862 -125399434 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 3 899 6949 112 8 19 chrX 41250862 41251399 -125398897 - L1_Mus1 LINE L1 -514 5369 4832 3 899 22 35 0 0 chrX 41251425 41251454 -125398842 + AT_rich Low_complexity Low_complexity 1 29 0 3 899 1949 293 104 21 chrX 41251459 41251831 -125398465 + Lx9 LINE L1 6621 7000 -644 3 899 663 216 189 0 chrX 41251831 41252021 -125398275 - URR1A DNA MER1_type 0 226 1 3 899 1949 293 104 21 chrX 41252021 41252594 -125397702 + Lx9 LINE L1 7001 7644 0 3 899 806 277 114 37 chrX 41252607 41252927 -125397369 + L1_Rod LINE L1 3718 4068 -1779 3 899 1230 134 11 0 chrX 41252927 41253114 -125397182 - B2_Mm2 SINE B2 -5 190 2 3 899 806 275 112 40 chrX 41253114 41253200 -125397096 + L1_Rod LINE L1 4069 4153 -1694 3 899 4907 93 0 6 chrX 41253273 41253953 -125396343 - L1_Mm LINE L1 -237 5646 4971 3 899 22920 74 1 0 chrX 41253951 41257386 -125392910 + L1Md_F3 LINE L1 888 4326 -1557 3 899 1734 69 0 0 chrX 41257385 41257602 -125392694 + L1Md_F3 LINE L1 5370 5586 -297 3 899 7677 55 2 35 chrX 41257603 41258676 -125391620 + L1Md_F3 LINE L1 5588 6584 0 3 899 284 336 50 21 chrX 41259485 41259625 -125390671 - MLT1A1 LTR MaLR 0 408 265 3 899 604 238 30 0 chrX 41259760 41260030 -125390266 + CT-rich Low_complexity Low_complexity 1 278 0 3 899 252 308 26 0 chrX 41260041 41260119 -125390177 - ID4 SINE ID -1 82 3 3 899 290 370 0 9 chrX 41260195 41260304 -125389992 - ID_B1 SINE B4 -34 190 83 3 899 256 362 49 18 chrX 41260293 41260456 -125389840 - MLT1A1 LTR MaLR -237 171 4 3 899 22 0 0 0 chrX 41260496 41260518 -125389778 + AT_rich Low_complexity Low_complexity 1 22 0 3 899 614 311 43 27 chrX 41260684 41260872 -125389424 + B3A SINE B2 20 210 -6 3 899 409 162 0 13 chrX 41261036 41261111 -125389185 - Lx4B LINE L1 -1220 5838 5765 3 899 1374 335 64 50 chrX 41261133 41262009 -125388287 - Lx8 LINE L1 -5 7468 6581 3 899 305 286 0 0 chrX 41262018 41262081 -125388215 + 5S rRNA rRNA 14 76 -45 3 899 912 280 147 6 chrX 41262230 41262550 -125387746 - MTD LTR MaLR -1 418 54 3 899 289 255 70 41 chrX 41262596 41262768 -125387528 - Lx7 LINE L1 -71 7625 7449 3 899 1166 88 0 0 chrX 41262862 41263022 -125387274 + L1_Mus2 LINE L1 6406 6565 -1 3 899 919 32 32 0 chrX 41263029 41263154 -125387142 + (GAAA)n Simple_repeat Simple_repeat 2 130 0 3 899 591 63 0 0 chrX 41263176 41263255 -125387041 + L1_Mus2 LINE L1 6037 6115 -451 3 899 1769 83 33 0 chrX 41263255 41263496 -125386800 + L1_Mus2 LINE L1 6317 6565 -1 3 899 330 309 74 35 chrX 41263509 41263767 -125386529 + L1M3 LINE L1 5328 5595 -585 3 899 2621 166 7 2 chrX 41264814 41265274 -125385022 + Lx LINE L1 6185 6646 -8 3 899 532 272 74 17 chrX 41266029 41266341 -125383955 - L1M2 LINE L1 -730 5561 5234 3 899 33 66 0 0 chrX 41266429 41266490 -125383806 + AT_rich Low_complexity Low_complexity 1 61 0 3 899 21 0 0 0 chrX 41266523 41266544 -125383752 + AT_rich Low_complexity Low_complexity 1 21 0 3 899 25 0 0 0 chrX 41266775 41266800 -125383496 + AT_rich Low_complexity Low_complexity 1 25 0 3 899 432 324 47 51 chrX 41266902 41267017 -125383279 + Lx7 LINE L1 7042 7156 -540 3 899 185 0 40 0 chrX 41267017 41267042 -125383254 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 899 432 324 47 51 chrX 41267042 41267202 -125383094 + Lx7 LINE L1 7157 7316 -380 3 899 649 81 0 0 chrX 41267193 41267280 -125383016 - Lx2A1 LINE L1 -1243 5765 5679 3 899 2186 143 41 13 chrX 41267281 41267671 -125382625 + Lx2A LINE L1 6604 7004 -4 3 899 243 207 44 33 chrX 41267688 41267778 -125382518 + T-rich Low_complexity Low_complexity 4 94 0 3 899 36 40 0 0 chrX 41267872 41267922 -125382374 + AT_rich Low_complexity Low_complexity 1 50 0 3 899 5787 93 16 0 chrX 41268304 41269110 -125381186 + L1_Mus2 LINE L1 5746 6564 -2 3 899 23 33 0 0 chrX 41269646 41269676 -125380620 + AT_rich Low_complexity Low_complexity 1 30 0 3 899 353 319 20 65 chrX 41269808 41270009 -125380287 - B3A SINE B2 -4 194 3 3 899 27 49 0 0 chrX 41270918 41270959 -125379337 + AT_rich Low_complexity Low_complexity 1 41 0 3 899 4104 154 42 3 chrX 41271173 41271871 -125378425 - Lx4A LINE L1 -1 7057 6333 3 899 48 32 0 0 chrX 41272283 41272345 -125377951 + AT_rich Low_complexity Low_complexity 1 62 0 3 899 300 296 206 21 chrX 41272709 41272947 -125377349 + L1M5 LINE L1 5360 5641 -599 3 899 359 281 0 20 chrX 41273889 41273987 -125376309 + B1_Mus2 SINE Alu 12 107 -40 3 899 614 363 7 21 chrX 41274024 41274314 -125375982 - B4A SINE B4 -2 290 5 3 899 3188 36 3 0 chrX 41275171 41275557 -125374739 - L1Md_T LINE L1 0 6582 6196 3 899 22 35 0 0 chrX 41275890 41275919 -125374377 + AT_rich Low_complexity Low_complexity 1 29 0 3 899 282 29 0 0 chrX 41276286 41276321 -125373975 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 899 180 279 16 32 chrX 41276632 41276695 -125373601 - L3b LINE CR1 -246 236 175 3 899 2837 206 74 7 chrX 41277044 41277626 -125372670 + RMER20B LTR ERVK 1 621 -6 3 899 22 0 0 0 chrX 41278054 41278076 -125372220 + AT_rich Low_complexity Low_complexity 1 22 0 3 899 1905 257 62 10 chrX 41279393 41279880 -125370416 + Lx6 LINE L1 6941 7452 -8 3 899 542 311 6 63 chrX 41280017 41280171 -125370125 - B3 SINE B2 -43 173 29 3 899 563 13 13 0 chrX 41280171 41280246 -125370050 - L1Md_T LINE L1 0 6582 6507 3 899 542 311 6 63 chrX 41280246 41280266 -125370030 - B3 SINE B2 -188 28 9 3 899 241 286 88 48 chrX 41280439 41280586 -125369710 + Charlie9 DNA MER1_type 709 861 -1896 3 899 285 29 0 0 chrX 41280614 41280648 -125369648 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 899 267 176 29 0 chrX 41280887 41280955 -125369341 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 3 899 24 32 0 0 chrX 41281062 41281093 -125369203 + AT_rich Low_complexity Low_complexity 1 31 0 3 899 2472 175 48 81 chrX 41281213 41281296 -125369000 - Lx3C LINE L1 -9 6967 6877 3 899 252 0 0 0 chrX 41281296 41281324 -125368972 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 899 2472 175 48 81 chrX 41281324 41281781 -125368515 - Lx3C LINE L1 -100 6876 6445 3 899 37 39 0 0 chrX 41281793 41281844 -125368452 + AT_rich Low_complexity Low_complexity 1 51 0 3 899 363 192 0 0 chrX 41281885 41281963 -125368333 - Lx9 LINE L1 -8 7636 7559 3 899 599 243 20 14 chrX 41282614 41282760 -125367536 - B1_Mur2 SINE Alu -1 148 2 3 899 27 49 0 0 chrX 41282833 41282874 -125367422 + AT_rich Low_complexity Low_complexity 1 41 0 3 899 583 299 73 39 chrX 41283333 41283935 -125366361 + L1M2 LINE L1 4938 5561 -736 3 899 30 77 0 0 chrX 41284115 41284180 -125366116 + AT_rich Low_complexity Low_complexity 1 65 0 3 899 240 35 0 0 chrX 41284220 41284249 -125366047 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 3 899 1108 89 7 0 chrX 41284384 41284530 -125365766 + B1_Mus1 SINE Alu 1 147 -1 3 899 305 330 39 39 chrX 41284546 41284726 -125365570 + L1MCa LINE L1 2209 2388 -4120 3 899 28 86 0 0 chrX 41285282 41285352 -125364944 + AT_rich Low_complexity Low_complexity 1 70 0 3 899 1626 155 28 82 chrX 41286528 41286911 -125363385 + Lx LINE L1 6254 6577 -77 3 899 722 160 25 6 chrX 41286912 41287069 -125363227 - MYSERV16_I-int LTR ERVK -1100 1226 1067 3 112 348 369 99 26 chrX 41287416 41287839 -125362457 + L1ME1 LINE L1 5396 5849 -330 3 900 2366 252 50 36 chrX 41288578 41289236 -125361060 - Lx6 LINE L1 -909 6551 5885 3 900 7057 78 7 6 chrX 41289234 41290824 -125359472 + L1Md_F2 LINE L1 4968 6559 -23 3 900 546 16 0 0 chrX 41290824 41290887 -125359409 + (TAA)n Simple_repeat Simple_repeat 1 63 0 3 900 605 214 15 14 chrX 41290887 41291057 -125359239 - Lx5 LINE L1 -1789 5907 5729 3 900 346 224 211 23 chrX 41291881 41292009 -125358287 - RMER10A LTR ERVL -9 433 282 3 900 1657 186 3 50 chrX 41292011 41292350 -125357946 + ORR1A4 LTR MaLR 3 325 -4 3 900 1418 146 8 0 chrX 41292354 41292607 -125357689 + ORR1A4-int LTR MaLR 1 255 -1708 3 900 611 339 66 37 chrX 41292661 41293010 -125357286 + Lx8 LINE L1 6508 6866 -607 4 900 22 0 0 0 chrX 41294113 41294135 -125356161 + AT_rich Low_complexity Low_complexity 1 22 0 4 900 571 300 136 43 chrX 41295148 41295472 -125354824 - ORR1E LTR MaLR -5 354 1 4 900 734 340 16 8 chrX 41295722 41295965 -125354331 - B4A SINE B4 -46 246 2 4 900 261 290 31 17 chrX 41296272 41296400 -125353896 + L1M2 LINE L1 5092 5281 -862 4 900 6298 129 14 4 chrX 41296412 41297375 -125352921 - L1_Mus4 LINE L1 -5 6631 5660 4 900 2076 60 8 0 chrX 41297375 41297642 -125352654 + L1_Mus1 LINE L1 5695 5963 -604 4 900 362 81 0 0 chrX 41297640 41297701 -125352595 + L1_Mm LINE L1 5368 5428 -455 4 900 5885 168 58 11 chrX 41297703 41298772 -125351524 + Lx2A LINE L1 5846 6964 -44 4 900 189 132 0 0 chrX 41298779 41298817 -125351479 + (TAAAAA)n Simple_repeat Simple_repeat 2 39 0 4 900 1504 126 44 67 chrX 41298913 41299211 -125351085 - Lx2A1 LINE L1 -738 6270 5980 4 900 4474 132 11 0 chrX 41299211 41299869 -125350427 + Lx2A1 LINE L1 6326 6990 -18 4 900 297 0 0 0 chrX 41299869 41299902 -125350394 + (TAA)n Simple_repeat Simple_repeat 1 33 0 4 900 721 275 67 8 chrX 41299909 41300147 -125350149 + Lx8 LINE L1 6870 7121 -352 4 900 4736 28 9 0 chrX 41300244 41300810 -125349486 + L1Md_F3 LINE L1 5603 6173 -411 4 900 34239 23 46 9 chrX 41300801 41305844 -125344452 + L1Md_A LINE L1 361 5585 -298 4 900 8345 33 1 0 chrX 41305845 41306838 -125343458 + L1Md_A LINE L1 5587 6580 -2 4 900 325 314 28 28 chrX 41308070 41308178 -125342118 - LTR85c LTR Gypsy? -24 799 692 4 900 237 208 0 0 chrX 41308445 41308493 -125341803 + CT-rich Low_complexity Low_complexity 1 48 0 4 900 342 0 0 0 chrX 41308519 41308557 -125341739 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 900 267 331 14 21 chrX 41309087 41309229 -125341067 - ORR1C2 LTR MaLR -238 146 6 4 900 24 53 0 0 chrX 41309996 41310034 -125340262 + AT_rich Low_complexity Low_complexity 1 38 0 4 900 25 0 0 0 chrX 41310260 41310285 -125340011 + AT_rich Low_complexity Low_complexity 1 25 0 4 900 21 0 0 0 chrX 41310344 41310365 -125339931 + AT_rich Low_complexity Low_complexity 1 21 0 4 900 31725 101 19 7 chrX 41310489 41316585 -125333711 - L1Md_F2 LINE L1 -1 6581 410 4 900 7089 82 26 4 chrX 41316601 41317657 -125332639 - L1Md_F2 LINE L1 -4 6578 5483 4 900 396 0 0 0 chrX 41317911 41317955 -125332341 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 900 4883 222 16 8 chrX 41318227 41319325 -125330971 + Lx3C LINE L1 5864 6970 -6 4 900 24 67 0 0 chrX 41319336 41319381 -125330915 + AT_rich Low_complexity Low_complexity 1 45 0 4 900 467 247 55 96 chrX 41320295 41320586 -125329710 - L1MA10 LINE L1 -12 6322 6044 4 900 216 0 0 0 chrX 41320595 41320619 -125329677 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 4 900 580 313 11 6 chrX 41320629 41320809 -125329487 - B3A SINE B2 -17 181 1 4 900 1906 154 61 3 chrX 41320824 41321169 -125329127 + Lx LINE L1 6289 6653 -1 4 900 26 30 0 0 chrX 41321179 41321212 -125329084 + AT_rich Low_complexity Low_complexity 1 33 0 4 900 270 234 46 53 chrX 41321276 41321407 -125328889 - L1MA10 LINE L1 -221 5947 5818 4 900 282 227 46 15 chrX 41321422 41321552 -125328744 + (TA)n Simple_repeat Simple_repeat 1 134 0 4 900 408 263 212 24 chrX 41321555 41321843 -125328453 - L1M2 LINE L1 -2870 3273 2932 4 900 22 0 0 0 chrX 41322007 41322029 -125328267 + AT_rich Low_complexity Low_complexity 1 22 0 4 900 297 378 47 34 chrX 41322320 41322468 -125327828 - RSINE1 SINE B4 -2 163 14 4 900 29 0 0 0 chrX 41322767 41322796 -125327500 + AT_rich Low_complexity Low_complexity 1 29 0 4 900 557 309 205 8 chrX 41323074 41323360 -125326936 + L2a LINE L2 2785 3126 -300 4 900 350 119 44 15 chrX 41323701 41323769 -125326527 + Lx9 LINE L1 7396 7465 -179 4 900 387 41 0 0 chrX 41323774 41323823 -125326473 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 900 1210 287 59 25 chrX 41324285 41325278 -125325018 - L1MA6 LINE L1 -165 6135 5099 4 900 468 0 0 0 chrX 41325279 41325331 -125324965 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 900 1076 233 167 22 chrX 41325334 41325790 -125324506 - Lx7 LINE L1 -37 7659 7138 4 900 7373 122 18 13 chrX 41325785 41327315 -125322981 - L1_Mus3 LINE L1 0 6638 5100 4 900 3142 49 0 0 chrX 41327315 41327703 -125322593 - L1Md_F2 LINE L1 -12 6570 6183 4 900 7373 145 21 7 chrX 41327703 41328071 -125322225 - L1_Mus3 LINE L1 -784 5099 4735 4 900 207 0 0 0 chrX 41328071 41328094 -125322202 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 900 7373 145 21 7 chrX 41328094 41328212 -125322084 - L1_Mus3 LINE L1 -1149 4734 4617 4 900 1965 217 128 16 chrX 41328208 41328722 -125321574 - Lx7 LINE L1 -547 7149 6578 4 900 450 0 0 0 chrX 41329115 41329165 -125321131 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 900 342 347 47 51 chrX 41329187 41329463 -125320833 - B4A SINE B4 -16 276 2 4 900 235 379 56 21 chrX 41329802 41329945 -125320351 + L2 LINE L2 2304 2451 -968 4 900 4912 118 29 7 chrX 41331236 41331983 -125318313 + Lx3_Mus LINE L1 6226 6990 -19 4 900 213 39 0 0 chrX 41331983 41332009 -125318287 + (CTAA)n Simple_repeat Simple_repeat 3 28 0 4 900 4912 118 29 7 chrX 41332009 41332023 -125318273 + Lx3_Mus LINE L1 6991 7004 -5 4 900 433 222 0 22 chrX 41332411 41332503 -125317793 - Lx5 LINE L1 -255 6795 6706 4 900 1804 196 6 16 chrX 41332504 41332867 -125317429 + Lx4A LINE L1 6019 6377 -681 4 900 1698 144 59 0 chrX 41332869 41333189 -125317107 + L1_Mus4 LINE L1 6296 6634 -2 4 900 243 266 12 37 chrX 41333362 41333444 -125316852 + PB1D10 SINE Alu 36 115 -2 4 900 212 239 14 27 chrX 41333523 41333596 -125316700 + GA-rich Low_complexity Low_complexity 1 72 0 4 900 270 0 0 0 chrX 41333596 41333626 -125316670 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 4 900 1902 176 37 6 chrX 41333628 41333977 -125316319 + Lx4A LINE L1 6380 6739 -319 4 900 206 178 22 0 chrX 41334279 41334324 -125315972 + A-rich Low_complexity Low_complexity 1 46 0 4 900 43 35 0 0 chrX 41334391 41334448 -125315848 + AT_rich Low_complexity Low_complexity 1 57 0 4 900 226 183 33 0 chrX 41334616 41334676 -125315620 + A-rich Low_complexity Low_complexity 1 62 0 4 900 375 286 38 49 chrX 41334695 41334879 -125315417 - L1MA9 LINE L1 -306 6006 5825 4 900 414 143 0 0 chrX 41334936 41335013 -125315283 + (TA)n Simple_repeat Simple_repeat 1 77 0 4 900 359 282 78 55 chrX 41335178 41335306 -125314990 - L1MA9 LINE L1 -540 5751 5611 4 900 4716 149 9 8 chrX 41335306 41336083 -125314213 - Lx2 LINE L1 -1 6996 6219 4 900 359 282 78 55 chrX 41336083 41336172 -125314124 - L1MA9 LINE L1 -681 5610 5529 4 900 21 0 0 0 chrX 41336338 41336359 -125313937 + AT_rich Low_complexity Low_complexity 1 21 0 4 900 2875 89 14 9 chrX 41336367 41336787 -125313509 - L1_Mur1 LINE L1 -636 5250 4829 4 900 4432 94 20 6 chrX 41336787 41337438 -125312858 + Lx3_Mus LINE L1 6350 7009 0 4 900 181 0 69 0 chrX 41337896 41337925 -125312371 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 4 900 1798 319 38 19 chrX 41338195 41338912 -125311384 - Lx9 LINE L1 -385 7259 6530 4 900 327 328 16 23 chrX 41339047 41339175 -125311121 - L1MA9 LINE L1 -2259 3884 3758 4 900 6884 104 7 3 chrX 41339437 41340617 -125309679 - L1_Mus2 LINE L1 -1 6565 5379 4 900 213 39 0 0 chrX 41340655 41340681 -125309615 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 900 32775 89 1 8 chrX 41340847 41346894 -125303402 - L1Md_F2 LINE L1 -3 6579 578 4 900 252 0 0 0 chrX 41346937 41346965 -125303331 + (T)n Simple_repeat Simple_repeat 1 28 0 4 900 324 344 83 0 chrX 41347162 41347258 -125303038 - RSINE1 SINE B4 -61 104 1 4 900 693 355 86 28 chrX 41347261 41348114 -125302182 - L1MA9 LINE L1 -2688 3455 2554 4 900 240 336 57 28 chrX 41348277 41348418 -125301878 - MLT2B4 LTR ERVL -363 193 49 4 900 656 278 87 60 chrX 41348680 41348864 -125301432 - B3 SINE B2 -27 189 1 4 900 947 274 111 12 chrX 41350565 41350898 -125299398 - ORR1D2 LTR MaLR 0 370 5 4 900 28 29 0 0 chrX 41351227 41351262 -125299034 + AT_rich Low_complexity Low_complexity 1 35 0 4 900 22 35 0 0 chrX 41351294 41351323 -125298973 + AT_rich Low_complexity Low_complexity 1 29 0 4 900 25 51 0 0 chrX 41351946 41351985 -125298311 + AT_rich Low_complexity Low_complexity 1 39 0 4 900 38 75 0 0 chrX 41352031 41352111 -125298185 + AT_rich Low_complexity Low_complexity 1 80 0 4 900 1060 285 52 3 chrX 41352575 41352881 -125297415 + Lx9 LINE L1 6572 6892 -752 4 900 374 173 87 0 chrX 41352890 41352994 -125297302 + Lx9 LINE L1 7524 7636 -8 4 900 235 308 27 71 chrX 41353093 41353205 -125297091 + MIRb SINE MIR 45 151 -117 4 900 213 39 0 0 chrX 41353260 41353286 -125297010 + (A)n Simple_repeat Simple_repeat 1 26 0 4 900 23 0 0 0 chrX 41353705 41353728 -125296568 + AT_rich Low_complexity Low_complexity 1 23 0 4 900 3260 306 57 15 chrX 41353793 41356232 -125294064 - Lx8 LINE L1 -217 7256 4710 4 900 967 315 24 18 chrX 41356426 41356808 -125293488 - ERVL-B4-int LTR ERVL -3555 2159 1776 4 900 303 280 0 130 chrX 41356822 41356945 -125293351 - ERVL-B4-int LTR ERVL -4842 919 813 4 900 762 286 29 31 chrX 41356961 41357336 -125292960 - ERVL-int LTR ERVL -4043 1714 1295 4 900 2098 148 3 3 chrX 41357341 41357674 -125292622 + ORR1A1 LTR MaLR 6 338 -8 4 900 768 295 3 29 chrX 41357685 41357901 -125292395 - ERVL-int LTR ERVL -4469 1292 1059 4 900 1013 49 14 0 chrX 41357901 41358043 -125292253 - L1Md_A LINE L1 0 6582 6439 4 900 768 338 101 30 chrX 41358043 41358356 -125291940 - ERVL-int LTR ERVL -4699 1058 710 4 900 194 0 39 0 chrX 41358854 41358880 -125291416 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 900 904 223 13 22 chrX 41358880 41359105 -125291191 - Lx9 LINE L1 -603 7041 6819 4 900 234 294 122 75 chrX 41360395 41360542 -125289754 - LTR16A LTR ERVL -106 345 192 4 900 21 36 0 0 chrX 41360869 41360897 -125289399 + AT_rich Low_complexity Low_complexity 1 28 0 4 900 21 36 0 0 chrX 41360953 41360981 -125289315 + AT_rich Low_complexity Low_complexity 1 28 0 4 900 25462 55 2 5 chrX 41361204 41365541 -125284755 + L1Md_Gf LINE L1 30 4450 -1436 4 900 2123 125 12 6 chrX 41365543 41365873 -125284423 - IAPLTR1a_Mm LTR ERVK -5 332 1 4 900 11504 32 33 10 chrX 41365873 41367284 -125283012 - IAPEz-int LTR ERVK 0 6481 5038 4 900 16524 19 0 0 chrX 41367269 41369136 -125281160 - IAPEz-int LTR ERVK -3256 3225 1359 4 900 3836 61 2 18 chrX 41369136 41369639 -125280657 - IAPEz-int LTR ERVK -5819 662 168 4 900 228 327 0 0 chrX 41369639 41369694 -125280602 - RLTR27 LTR ERVK -34 275 221 4 900 1175 66 25 98 chrX 41369694 41369897 -125280399 - IAPEz-int LTR ERVK -6288 193 6 4 900 2086 128 12 6 chrX 41369897 41370227 -125280069 - IAPLTR1a_Mm LTR ERVK -5 332 1 4 900 9832 24 0 0 chrX 41370227 41371372 -125278924 + L1Md_T LINE L1 4442 5586 -297 4 900 8279 40 0 0 chrX 41371372 41372367 -125277929 + L1Md_T LINE L1 5587 6581 -1 4 900 240 284 20 67 chrX 41372700 41372940 -125277356 - L1M5 LINE L1 -3703 2440 2194 4 900 1187 45 0 0 chrX 41373170 41373325 -125276971 + L1Md_F3 LINE L1 6417 6571 -13 5 900 329 382 130 14 chrX 41374575 41374920 -125275376 + MLT1B LTR MaLR 1 385 -5 5 900 313 242 48 40 chrX 41375214 41375339 -125274957 + L1MDa LINE L1 1995 2120 -4513 5 900 493 151 54 124 chrX 41375369 41375498 -125274798 + Lx9 LINE L1 7219 7338 -306 5 900 289 246 24 32 chrX 41375496 41375622 -125274674 + Lx9 LINE L1 7517 7641 -3 5 900 440 283 86 43 chrX 41375981 41376170 -125274126 - MTEb LTR MaLR -4 375 159 5 900 619 297 97 0 chrX 41376181 41376376 -125273920 - MTEb LTR MaLR -165 214 1 5 900 1130 219 4 8 chrX 41376458 41376693 -125273603 - Lx4A LINE L1 -3 7055 6822 5 900 1684 90 0 0 chrX 41376693 41376916 -125273380 + L1_Mur1 LINE L1 5364 5586 -300 5 900 2582 68 0 6 chrX 41376916 41377255 -125273041 + IAPLTR4 LTR ERVK 1 337 -8 5 900 1507 103 0 0 chrX 41377261 41377465 -125272831 + L1_Mur1 LINE L1 5581 5784 -102 5 900 1505 37 5 0 chrX 41377465 41377655 -125272641 + MTA_Mm LTR MaLR 1 191 -205 5 900 604 85 0 0 chrX 41377655 41377737 -125272559 - L1_Mus1 LINE L1 -232 6335 6254 5 900 540 151 0 0 chrX 41377737 41377830 -125272466 + L1_Mus1 LINE L1 6397 6489 -78 5 900 1414 125 69 36 chrX 41377831 41377901 -125272395 + MTA_Mm LTR MaLR 112 184 -212 5 900 414 0 0 0 chrX 41377901 41377947 -125272349 + (GA)n Simple_repeat Simple_repeat 2 47 0 5 900 1414 125 69 36 chrX 41377947 41377978 -125272318 + MTA_Mm LTR MaLR 185 215 -181 5 900 3705 64 8 0 chrX 41377978 41378461 -125271835 + L1Md_F2 LINE L1 6096 6582 0 5 900 1414 125 69 36 chrX 41378461 41378632 -125271664 + MTA_Mm LTR MaLR 216 393 -3 5 900 7771 112 30 12 chrX 41378632 41379844 -125270452 + Lx3_Mus LINE L1 5775 7008 -1 5 900 504 134 0 0 chrX 41379887 41379984 -125270312 - L1_Mus3 LINE L1 0 6638 6542 5 900 192 77 0 0 chrX 41380163 41380189 -125270107 + (T)n Simple_repeat Simple_repeat 1 26 0 5 900 1198 48 0 0 chrX 41380189 41380336 -125269960 - B1_Mus2 SINE Alu 0 147 1 5 900 372 152 0 0 chrX 41380384 41380450 -125269846 + (TA)n Simple_repeat Simple_repeat 1 66 0 5 900 555 326 54 32 chrX 41380451 41380856 -125269440 + L1MA8 LINE L1 5644 6057 -234 5 900 225 0 0 0 chrX 41381183 41381208 -125269088 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 900 229 147 0 0 chrX 41381269 41381303 -125268993 - tRNA-Ile-ATA tRNA tRNA -39 38 5 5 900 5412 60 3 7 chrX 41381303 41382005 -125268291 + L1Md_F2 LINE L1 5881 6579 -3 5 900 33 0 0 0 chrX 41382005 41382038 -125268258 + AT_rich Low_complexity Low_complexity 1 33 0 5 900 703 276 83 29 chrX 41382141 41382346 -125267950 - B3 SINE B2 0 216 1 5 900 232 308 0 12 chrX 41382417 41382497 -125267799 - ID4 SINE ID -4 79 2 5 900 901 320 69 23 chrX 41383796 41384262 -125266034 + ORR1E LTR MaLR 13 354 -11 5 900 225 215 63 0 chrX 41384568 41384647 -125265649 + (CATA)n Simple_repeat Simple_repeat 1 84 0 5 900 773 274 5 65 chrX 41384763 41384978 -125265318 + B3 SINE B2 15 216 0 5 900 2225 203 8 25 chrX 41385065 41385536 -125264760 + Lx3B LINE L1 6508 6970 -3 5 900 1187 118 17 0 chrX 41385867 41386045 -125264251 + B2_Mm2 SINE B2 1 181 -14 5 900 469 158 20 0 chrX 41386230 41386331 -125263965 + (TA)n Simple_repeat Simple_repeat 2 104 0 5 900 554 310 75 47 chrX 41386898 41387457 -125262839 - L1MB8 LINE L1 -197 5981 5407 5 900 246 70 52 17 chrX 41387899 41387957 -125262339 + (TTTTG)n Simple_repeat Simple_repeat 1 60 0 5 900 1080 86 0 0 chrX 41387958 41388097 -125262199 - B1_Mm SINE Alu -7 140 2 5 900 1011 335 37 18 chrX 41388206 41388534 -125261762 - ORR1D2 LTR MaLR -36 334 1 5 900 5018 95 3 0 chrX 41388805 41389480 -125260816 + L1_Mus4 LINE L1 5758 6434 -202 5 900 339 25 0 0 chrX 41389540 41389580 -125260716 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 900 2237 30 0 0 chrX 41389764 41390029 -125260267 - L1Md_A LINE L1 0 6582 6318 5 900 2513 34 0 0 chrX 41390032 41390329 -125259967 + L1Md_T LINE L1 6052 6348 -234 5 900 263 351 7 76 chrX 41390709 41390854 -125259442 + MER3 DNA MER1_type 20 154 -55 5 900 271 240 0 0 chrX 41390905 41390955 -125259341 + B4A SINE B4 6 55 -237 5 900 448 299 0 38 chrX 41390988 41391120 -125259176 + B4 SINE B4 145 271 -21 5 900 248 194 16 16 chrX 41392399 41392462 -125257834 + A-rich Low_complexity Low_complexity 3 65 0 5 900 298 57 19 19 chrX 41394466 41394520 -125255776 + (CAAAA)n Simple_repeat Simple_repeat 5 58 0 5 900 294 29 0 0 chrX 41396330 41396365 -125253931 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 900 1819 64 4 4 chrX 41396386 41396621 -125253675 - MTA_Mm LTR MaLR 0 396 162 5 900 35354 36 0 0 chrX 41396621 41402199 -125248097 + L1Md_T LINE L1 1 5589 -297 5 900 8906 9 0 0 chrX 41402199 41403195 -125247101 + L1Md_T LINE L1 5590 6585 0 5 900 252 0 0 0 chrX 41403260 41403288 -125247008 + (A)n Simple_repeat Simple_repeat 1 28 0 5 900 1378 40 6 0 chrX 41403288 41403464 -125246832 - MTA_Mm LTR MaLR -219 177 1 5 900 8749 28 4 8 chrX 41403464 41403849 -125246447 - MTA_Mm-int LTR MaLR 0 1098 721 5 900 7356 16 0 0 chrX 41403849 41404671 -125245625 - RLTR13B2 LTR ERVK 0 822 1 5 900 8749 28 4 8 chrX 41404671 41405388 -125244908 - MTA_Mm-int LTR MaLR -378 720 1 5 900 3216 56 2 2 chrX 41405388 41405784 -125244512 - MTA_Mm LTR MaLR 0 396 1 5 900 689 351 9 19 chrX 41405797 41406012 -125244284 - B4A SINE B4 -72 220 8 5 900 1077 23 0 0 chrX 41406168 41406296 -125244000 + (TCTCCC)n Simple_repeat Simple_repeat 3 130 0 5 900 290 286 125 42 chrX 41407391 41407559 -125242737 - Lx8 LINE L1 -1107 6366 6185 5 900 316 286 9 142 chrX 41408110 41408216 -125242080 + B4A SINE B4 10 102 -63 5 900 235 150 16 16 chrX 41408352 41408413 -125241883 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 900 24 67 0 0 chrX 41408777 41408822 -125241474 + AT_rich Low_complexity Low_complexity 1 45 0 5 900 1452 319 60 30 chrX 41408834 41408959 -125241337 - Lx5 LINE L1 -17 7033 6920 5 900 2130 102 12 64 chrX 41408959 41409304 -125240992 + ORR1A2 LTR MaLR 1 327 0 5 900 1452 319 60 30 chrX 41409304 41409740 -125240556 - Lx5 LINE L1 -131 6919 6455 5 900 7659 44 36 3 chrX 41409759 41410715 -125239581 - L1Md_F2 LINE L1 0 6582 5596 5 900 1904 267 83 5 chrX 41410718 41411306 -125238990 - Lx5 LINE L1 -730 6730 5880 5 900 318 283 136 68 chrX 41411354 41411707 -125238589 - Lx8 LINE L1 -1 7472 7096 5 900 676 175 80 60 chrX 41412030 41412128 -125238168 - RMER1A Other Other 0 1030 926 5 900 261 83 0 0 chrX 41412128 41412164 -125238132 + (CATA)n Simple_repeat Simple_repeat 3 38 0 5 900 676 175 80 60 chrX 41412164 41412266 -125238030 - RMER1A Other Other -105 925 826 5 900 459 0 0 0 chrX 41412267 41412318 -125237978 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 900 1086 176 95 153 chrX 41412322 41412746 -125237550 - ORR1B1 LTR MaLR -10 319 8 5 900 2375 115 8 0 chrX 41412746 41413110 -125237186 + L1_Mus4 LINE L1 6268 6634 -2 5 900 845 129 48 91 chrX 41413110 41413171 -125237125 - ORR1B1-int LTR MaLR -129 1834 1785 5 900 449 203 101 135 chrX 41413159 41413307 -125236989 - MT2B LTR ERVL -445 156 14 5 900 726 209 6 69 chrX 41413211 41413386 -125236910 - ORR1B1-int LTR MaLR -1260 703 540 5 900 1455 148 261 6 chrX 41413366 41413707 -125236589 - ORR1B1-int LTR MaLR -1363 429 2 5 900 351 151 0 0 chrX 41413708 41413761 -125236535 - ORR1B1 LTR MaLR 0 329 277 5 900 1065 87 0 0 chrX 41413764 41413958 -125236338 - L1Md_F2 LINE L1 0 6582 6420 5 900 1187 194 4 118 chrX 41413959 41414239 -125236057 - ORR1B1 LTR MaLR -48 346 99 5 900 529 319 107 83 chrX 41414247 41414715 -125235581 - RMER1B Other Other -577 489 11 5 900 303 364 21 0 chrX 41415031 41415171 -125235125 - L1MDa LINE L1 -4339 2294 2152 5 900 255 241 59 24 chrX 41415434 41415519 -125234777 + MTE2a LTR MaLR 278 365 -14 5 900 1984 240 129 18 chrX 41415866 41416560 -125233736 - Lx5 LINE L1 -8 7042 6272 5 900 281 371 19 23 chrX 41416690 41416905 -125233391 - L1MB5 LINE L1 -46 6128 5915 5 900 259 267 21 43 chrX 41417609 41417703 -125232593 - MLT1A1 LTR MaLR -6 402 311 5 900 252 341 81 8 chrX 41417954 41418078 -125232218 - ORR1E LTR MaLR -226 133 1 5 900 355 329 101 17 chrX 41418078 41418358 -125231938 - ORR1E-int LTR MaLR -50 1530 1047 5 112 1195 271 41 22 chrX 41418566 41418928 -125231368 - RMER5 LTR ERV1 -1 533 165 5 901 465 19 0 0 chrX 41419061 41419115 -125231181 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 901 24 0 0 0 chrX 41419753 41419777 -125230519 + AT_rich Low_complexity Low_complexity 1 24 0 5 901 2271 160 32 28 chrX 41419787 41419857 -125230439 - Lx3C LINE L1 -1 6975 6906 5 901 1806 154 199 45 chrX 41419857 41420319 -125229977 + RMER16 LTR ERVK 1 533 0 5 901 2271 160 32 28 chrX 41420319 41420685 -125229611 - Lx3C LINE L1 -71 6905 6537 5 901 866 98 0 0 chrX 41420685 41420807 -125229489 - Lx3C LINE L1 -1072 5904 5783 5 901 7983 33 21 3 chrX 41420815 41421795 -125228501 - L1Md_F3 LINE L1 0 6584 5587 5 901 1701 160 0 94 chrX 41421810 41421864 -125228432 - Lx3C LINE L1 -101 5785 5736 5 901 4845 57 7 0 chrX 41421864 41422477 -125227819 - L1Md_F2 LINE L1 -1 6581 5965 5 901 1701 160 0 94 chrX 41422477 41422753 -125227543 - Lx3C LINE L1 -151 5735 5486 5 901 239 62 0 0 chrX 41422745 41422777 -125227519 - L1_Mur1 LINE L1 -688 5198 5167 5 901 265 298 0 69 chrX 41423114 41423215 -125227081 + RMER15 LTR ERVL 340 433 -142 5 901 21 0 0 0 chrX 41423471 41423492 -125226804 + AT_rich Low_complexity Low_complexity 1 21 0 5 901 1041 285 97 15 chrX 41423501 41423832 -125226464 + MTD LTR MaLR 5 362 -57 5 901 1646 171 72 36 chrX 41423839 41424172 -125226124 + ORR1B1 LTR MaLR 41 385 -9 5 901 243 263 0 0 chrX 41424178 41424235 -125226061 + MTD LTR MaLR 361 417 -2 5 901 683 310 61 92 chrX 41424235 41424575 -125225721 - MTE2a LTR MaLR -47 332 4 5 901 3888 56 35 35 chrX 41425694 41426245 -125224051 - L1Md_F3 LINE L1 -2 6582 6032 5 901 31080 75 4 20 chrX 41426246 41431293 -125219003 - L1Md_F3 LINE L1 -555 5328 370 5 901 5293 63 1 0 chrX 41431480 41432157 -125218139 + L1Md_F2 LINE L1 5893 6570 -12 5 901 1879 50 0 12 chrX 41432461 41432702 -125217594 - L1Md_F2 LINE L1 -12 6570 6333 5 901 276 184 22 33 chrX 41433073 41433163 -125217133 - L1_Mus3 LINE L1 -6 6632 6544 5 901 11258 182 52 109 chrX 41433155 41436606 -125213690 - L1VL4 LINE L1 -1508 4378 1108 5 901 30 0 0 0 chrX 41436627 41436657 -125213639 + AT_rich Low_complexity Low_complexity 1 30 0 5 901 1530 207 3 7 chrX 41436660 41436966 -125213330 - Lx3A LINE L1 -3 6978 6674 5 901 5686 124 41 8 chrX 41436966 41436985 -125213311 + Lx3_Mus LINE L1 5725 5743 -1266 5 901 222 0 79 0 chrX 41436985 41437023 -125213273 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 5 901 5686 124 41 8 chrX 41437023 41437944 -125212352 + Lx3_Mus LINE L1 5744 6695 -314 5 901 3917 146 12 0 chrX 41437941 41438546 -125211750 - L1VL4 LINE L1 -5533 769 158 5 901 3486 121 54 135 chrX 41439644 41440475 -125209821 - RMER17A LTR ERVK -1 750 1 5 901 546 271 23 28 chrX 41440817 41441033 -125209263 + L1_Mur1 LINE L1 4 218 -6766 5 901 1389 88 0 85 chrX 41441039 41441262 -125209034 + L1_Mus2 LINE L1 6362 6565 -1 5 901 474 18 0 0 chrX 41441292 41441347 -125208949 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 901 348 24 0 0 chrX 41441342 41441383 -125208913 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 901 1831 132 12 12 chrX 41441384 41441728 -125208568 + L1_Mur1 LINE L1 1422 1765 -4121 5 901 6694 101 16 4 chrX 41441726 41442700 -125207596 + Lx3_Mus LINE L1 5975 6960 -49 6 901 26 50 0 0 chrX 41442700 41442740 -125207556 + AT_rich Low_complexity Low_complexity 1 40 0 6 901 3819 170 99 80 chrX 41442878 41444169 -125206127 - L1_Mur2 LINE L1 -3594 2253 907 6 901 399 343 14 14 chrX 41444178 41444320 -125205976 - MTEa LTR MaLR -229 150 9 6 901 475 315 85 10 chrX 41444648 41444943 -125205353 + L1M4c LINE L1 1416 1732 -4652 6 901 2615 154 23 38 chrX 41445172 41445652 -125204644 - MT2C_Mm LTR ERVL -2 473 1 6 901 534 264 168 28 chrX 41445715 41445929 -125204367 - MTD LTR MaLR 0 419 176 6 901 504 385 20 0 chrX 41446100 41446286 -125204010 + B3 SINE B2 9 198 -18 6 901 234 62 0 0 chrX 41446286 41446318 -125203978 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 6 901 504 385 20 0 chrX 41446318 41446331 -125203965 + B3 SINE B2 199 211 -5 6 901 313 320 68 50 chrX 41446542 41446762 -125203534 + L1M4c LINE L1 4429 4652 -1730 6 901 639 323 15 0 chrX 41446762 41446960 -125203336 + B3 SINE B2 3 203 -13 6 901 1459 263 50 50 chrX 41447201 41447356 -125202940 + L1VL4 LINE L1 108 245 -6057 6 901 2654 64 6 0 chrX 41447356 41447699 -125202597 + ORR1A1 LTR MaLR 2 346 0 6 901 1459 263 50 50 chrX 41447699 41448060 -125202236 + L1VL4 LINE L1 246 624 -5678 6 901 8239 142 12 7 chrX 41448072 41450244 -125200052 + L1_Mus4 LINE L1 4443 6629 -7 6 901 1498 281 87 26 chrX 41450254 41450748 -125199548 + Lx6 LINE L1 6937 7460 0 6 901 345 389 53 53 chrX 41453784 41453937 -125196359 + B4 SINE B4 6 150 -142 6 901 3161 146 19 19 chrX 41453937 41453972 -125196324 - Lx LINE L1 -14 6640 6608 6 901 3031 14 42 3 chrX 41453972 41454325 -125195971 - IAPLTR1_Mm LTR ERVK 0 367 1 6 901 3161 146 19 19 chrX 41454325 41454820 -125195476 - Lx LINE L1 -47 6607 6110 6 901 345 397 52 59 chrX 41454820 41454944 -125195352 + B4 SINE B4 151 277 -15 6 901 237 33 0 0 chrX 41454948 41454978 -125195318 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 901 719 22 11 0 chrX 41454978 41455066 -125195230 + (GA)n Simple_repeat Simple_repeat 2 91 0 6 901 27 62 0 0 chrX 41455585 41455633 -125194663 + AT_rich Low_complexity Low_complexity 1 48 0 6 901 8550 65 4 2 chrX 41456784 41458575 -125191721 - L1Md_F2 LINE L1 0 6582 4790 6 901 37585 53 0 15 chrX 41458569 41464279 -125186017 - L1Md_T LINE L1 -478 6104 480 6 901 1133 213 14 0 chrX 41464456 41464677 -125185619 + URR1A DNA MER1_type 3 226 0 6 901 461 376 76 22 chrX 41464715 41464992 -125185304 + MLT1E1A LTR MaLR 387 678 -2 6 901 314 253 0 52 chrX 41465384 41465480 -125184816 + Lx9 LINE L1 7305 7395 -249 6 901 425 361 19 6 chrX 41465639 41465798 -125184498 - B3A SINE B2 -2 196 36 6 901 21 71 0 0 chrX 41467337 41467379 -125182917 + AT_rich Low_complexity Low_complexity 1 42 0 6 901 408 316 8 0 chrX 41467392 41467525 -125182771 - Lx8 LINE L1 -547 6926 6793 6 901 769 191 69 0 chrX 41467573 41467746 -125182550 - Lx3_Mus LINE L1 -8 7001 6817 6 901 39993 21 2 0 chrX 41467865 41474062 -125176234 - L1Md_A LINE L1 0 6582 416 6 901 2941 240 51 6 chrX 41474153 41474815 -125175481 + Lx6 LINE L1 6764 7455 -5 6 901 381 327 39 13 chrX 41474823 41474978 -125175318 - Lx8 LINE L1 -670 6803 6645 6 901 32 0 0 0 chrX 41474989 41475021 -125175275 + AT_rich Low_complexity Low_complexity 1 32 0 6 901 289 130 0 0 chrX 41475216 41475270 -125175026 - Lx8 LINE L1 0 7473 7420 6 901 972 102 0 58 chrX 41475524 41475680 -125174616 - B1_Mus1 SINE Alu 0 148 2 6 901 293 336 52 0 chrX 41475697 41475750 -125174546 - Lx8 LINE L1 -845 6628 6575 6 901 206 32 32 0 chrX 41475750 41475781 -125174515 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 6 901 293 336 52 0 chrX 41475781 41475843 -125174453 - Lx8 LINE L1 -899 6574 6508 6 901 3385 134 34 105 chrX 41475843 41476636 -125173660 + RMER17A LTR ERVK 1 737 -14 6 901 189 0 0 0 chrX 41476645 41476666 -125173630 + (T)n Simple_repeat Simple_repeat 1 21 0 6 901 328 287 18 18 chrX 41476666 41476776 -125173520 - Lx8 LINE L1 -949 6524 6415 6 901 576 293 10 2 chrX 41476801 41477030 -125173266 - L1_Rod LINE L1 -2114 4029 3771 6 901 426 293 143 40 chrX 41477041 41477614 -125172682 - L1_Rod LINE L1 -2164 3683 3040 6 901 1834 163 14 54 chrX 41477771 41478141 -125172155 - L1_Mus4 LINE L1 -7 6629 6275 6 901 1518 209 105 6 chrX 41478287 41478638 -125171658 + ORR1B1 LTR MaLR 9 394 0 6 901 626 298 59 21 chrX 41478639 41479061 -125171235 - L1_Rod LINE L1 -3106 2741 2304 6 901 22 35 0 0 chrX 41479512 41479541 -125170755 + AT_rich Low_complexity Low_complexity 1 29 0 6 901 428 289 78 14 chrX 41479545 41479710 -125170586 + B3A SINE B2 4 175 -41 6 901 2752 108 28 0 chrX 41479933 41480332 -125169964 - L1_Mus2 LINE L1 0 6566 6157 6 901 15041 70 6 2 chrX 41480537 41483253 -125167043 - L1Md_F2 LINE L1 -6 6576 3853 6 901 2787 78 23 0 chrX 41483256 41483643 -125166653 + L1Md_F2 LINE L1 3475 3870 -2013 6 901 8942 8 0 0 chrX 41483764 41484827 -125165469 - L1Md_T LINE L1 0 6582 5520 6 901 8954 7 0 0 chrX 41486439 41487787 -125162509 - L1Md_A LINE L1 0 6582 5234 6 901 7006 8 0 0 chrX 41487787 41488580 -125161716 + L1Md_A LINE L1 4461 5253 -630 6 901 21 57 0 0 chrX 41489300 41489335 -125160961 + AT_rich Low_complexity Low_complexity 1 35 0 6 901 10776 82 3 3 chrX 41491645 41493119 -125157177 + L1Md_F2 LINE L1 4112 5585 -298 6 901 6808 92 18 4 chrX 41493120 41494089 -125156207 + L1Md_F2 LINE L1 5587 6568 -14 6 901 234 276 0 13 chrX 41495333 41495410 -125154886 + (TCTCTG)n Simple_repeat Simple_repeat 1 76 0 6 901 554 41 14 0 chrX 41495410 41495483 -125154813 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 6 901 749 217 83 16 chrX 41495489 41495681 -125154615 - Lx6 LINE L1 -26 7434 7230 6 901 277 333 0 0 chrX 41495679 41495754 -125154542 - Lx6 LINE L1 -817 6643 6569 6 901 1806 201 53 25 chrX 41495727 41496121 -125154175 - L1_Mur3 LINE L1 -27 5853 5449 6 901 537 325 128 62 chrX 41497295 41497653 -125152643 + MLT1B LTR MaLR 4 385 -5 6 901 300 27 0 0 chrX 41497694 41497731 -125152565 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 901 423 0 0 0 chrX 41497731 41497777 -125152519 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 901 796 300 21 11 chrX 41498000 41498280 -125152016 - RMER1C Other Other 0 1342 1060 6 901 696 286 91 35 chrX 41498281 41498535 -125151761 + RMER1C Other Other 697 964 -378 6 901 945 176 90 11 chrX 41499075 41499264 -125151032 + MTC LTR MaLR 1 204 -217 6 901 1459 287 44 17 chrX 41499396 41499804 -125150492 + MTD LTR MaLR 1 419 0 6 901 28 61 0 0 chrX 41500123 41500172 -125150124 + AT_rich Low_complexity Low_complexity 1 49 0 1 901 894 126 26 7 chrX 41500487 41500639 -125149657 - Lx2B LINE L1 -1132 5868 5714 2 901 3039 241 50 21 chrX 41500656 41501288 -125149008 + Lx5 LINE L1 6266 6912 -138 3 901 381 123 0 0 chrX 41501288 41501353 -125148943 + (TG)n Simple_repeat Simple_repeat 1 65 0 4 901 3039 241 50 21 chrX 41501353 41501483 -125148813 + Lx5 LINE L1 6913 7050 0 3 901 221 351 0 31 chrX 41501513 41501610 -125148686 - MIRc SINE MIR -10 258 165 5 901 969 293 31 57 chrX 41502123 41502477 -125147819 - ORR1D1 LTR MaLR -29 345 1 6 901 308 220 15 22 chrX 41502533 41502668 -125147628 + CT-rich Low_complexity Low_complexity 1 134 0 7 901 1708 219 179 36 chrX 41502677 41503285 -125147011 - Lx7 LINE L1 -3 7693 6998 8 901 2703 255 11 20 chrX 41503289 41503945 -125146351 - Lx7 LINE L1 -901 6795 6146 8 901 1489 252 57 46 chrX 41503938 41504469 -125145827 + Lx8 LINE L1 5406 5947 -1749 9 901 24 32 0 0 chrX 41504655 41504686 -125145610 + AT_rich Low_complexity Low_complexity 1 31 0 1 901 636 97 0 0 chrX 41504867 41504960 -125145336 + (TTTC)n Simple_repeat Simple_repeat 2 94 0 1 901 516 32 0 0 chrX 41505065 41505127 -125145169 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 901 459 338 175 30 chrX 41505168 41505671 -125144625 - L1MEf LINE L1 -4956 1244 669 1 901 384 306 138 22 chrX 41506142 41506636 -125143660 - L1M2 LINE L1 -922 5221 4671 1 901 23 33 0 0 chrX 41506639 41506669 -125143627 + AT_rich Low_complexity Low_complexity 1 30 0 1 901 1984 54 23 0 chrX 41506843 41507104 -125143192 + L1Md_F3 LINE L1 6304 6570 -14 1 901 204 40 0 0 chrX 41507134 41507159 -125143137 + (A)n Simple_repeat Simple_repeat 1 25 0 1 901 257 284 28 38 chrX 41507159 41507265 -125143031 + Lx8 LINE L1 6085 6189 -1284 9 901 558 133 28 23 chrX 41507276 41507453 -125142843 + (TA)n Simple_repeat Simple_repeat 2 179 0 1 901 1152 282 96 61 chrX 41507453 41507996 -125142300 - Lx6 LINE L1 -90 7370 6809 1 901 679 271 79 56 chrX 41508292 41508686 -125141610 + L1_Mur3 LINE L1 819 1221 -6507 2 901 217 232 0 55 chrX 41508693 41508766 -125141530 + GA-rich Low_complexity Low_complexity 1 69 0 2 901 713 132 8 0 chrX 41508766 41508887 -125141409 + (GGAAA)n Simple_repeat Simple_repeat 4 125 0 2 901 1988 203 59 27 chrX 41508887 41509444 -125140852 + L1_Mur3 LINE L1 1243 1817 -4060 2 901 3512 201 39 33 chrX 41509459 41510114 -125140182 - Lx4B LINE L1 -608 6450 5794 2 901 239 0 32 0 chrX 41510114 41510145 -125140151 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 901 1134 82 7 0 chrX 41510155 41510301 -125139995 - B1_Mus1 SINE Alu -1 147 1 2 901 3512 201 39 33 chrX 41510301 41510451 -125139845 - Lx4B LINE L1 -1273 5785 5629 2 901 1291 192 95 7 chrX 41510439 41510722 -125139574 + Lx4B LINE L1 6733 7040 -18 2 901 1224 205 58 71 chrX 41510730 41511024 -125139272 + MTC LTR MaLR 77 366 -55 2 901 1278 222 82 3 chrX 41511033 41511363 -125138933 + L1_Mur3 LINE L1 2194 2549 -3328 2 901 486 174 0 10 chrX 41511364 41511463 -125138833 + L1_Mur3 LINE L1 2712 2809 -3071 2 901 477 0 0 0 chrX 41511482 41511535 -125138761 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 901 2033 272 130 16 chrX 41511565 41512301 -125137995 + Lx8 LINE L1 6653 7472 -1 9 901 3792 69 2 0 chrX 41512569 41513061 -125137235 - L1_Mm LINE L1 -214 5669 5177 2 901 807 43 0 17 chrX 41513065 41513184 -125137112 + L1Md_F3 LINE L1 6453 6569 -15 3 901 3263 50 0 0 chrX 41513492 41513888 -125136408 + MTA_Mm LTR MaLR 1 396 0 3 901 9074 36 5 0 chrX 41513888 41514981 -125135315 + MTA_Mm-int LTR MaLR 1 1098 0 3 901 3353 38 0 0 chrX 41514981 41515377 -125134919 + MTA_Mm LTR MaLR 1 396 0 3 901 689 100 8 0 chrX 41515763 41515883 -125134413 + L1Md_F2 LINE L1 6462 6582 0 3 901 1154 114 11 11 chrX 41515961 41516138 -125134158 + B2_Mm2 SINE B2 1 177 -18 3 901 222 62 0 0 chrX 41516139 41516171 -125134125 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 3 901 2921 296 78 6 chrX 41516780 41517788 -125132508 - RMER1A Other Other -38 992 50 3 901 375 312 104 45 chrX 41517790 41517991 -125132305 - RMER1B Other Other -774 292 80 3 901 268 188 15 30 chrX 41518417 41518483 -125131813 - Lx7 LINE L1 -1 7695 7631 3 901 1043 305 119 49 chrX 41518701 41519297 -125130999 + RCHARR1 DNA MER1_type 56 693 -281 3 901 180 97 0 0 chrX 41519326 41519357 -125130939 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 3 901 273 336 83 8 chrX 41519360 41519492 -125130804 - Lx6 LINE L1 -136 7324 7183 4 901 25 65 0 0 chrX 41519607 41519653 -125130643 + AT_rich Low_complexity Low_complexity 1 46 0 4 901 51 31 0 0 chrX 41519713 41519778 -125130518 + AT_rich Low_complexity Low_complexity 1 65 0 4 901 297 240 64 85 chrX 41520294 41520435 -125129861 - Lx7 LINE L1 0 7696 7559 4 901 1084 88 0 7 chrX 41520568 41520716 -125129580 - B1_Mus1 SINE Alu 0 148 2 4 901 204 67 0 0 chrX 41521561 41521591 -125128705 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 4 901 2873 88 10 2 chrX 41522018 41522419 -125127877 + Lx3_Mus LINE L1 6598 7001 -8 4 901 239 276 17 0 chrX 41522601 41522659 -125127637 + Lx8 LINE L1 6100 6158 -1315 4 901 868 301 52 33 chrX 41522750 41523117 -125127179 + Lx7 LINE L1 6927 7300 -396 4 901 865 203 76 5 chrX 41523233 41523431 -125126865 - Lx9 LINE L1 -438 7206 6995 4 901 1690 235 41 0 chrX 41523434 41523847 -125126449 + Lx9 LINE L1 7214 7643 -1 4 901 387 307 50 0 chrX 41523996 41524097 -125126199 - B3 SINE B2 -97 119 14 5 901 23 0 0 0 chrX 41524112 41524135 -125126161 + AT_rich Low_complexity Low_complexity 1 23 0 5 901 22 0 0 0 chrX 41524397 41524419 -125125877 + AT_rich Low_complexity Low_complexity 1 22 0 5 901 1372 177 93 71 chrX 41525781 41526103 -125124193 + ORR1A4 LTR MaLR 1 329 0 5 901 2009 177 16 8 chrX 41526111 41526481 -125123815 + ORR1A4-int LTR MaLR 8 380 -1583 5 901 6901 56 3 0 chrX 41526496 41527360 -125122936 - L1Md_F2 LINE L1 -1 6581 5715 5 901 1107 226 23 19 chrX 41527360 41527626 -125122670 + ORR1A4-int LTR MaLR 382 648 -1315 5 901 41 82 0 0 chrX 41527698 41527795 -125122501 + AT_rich Low_complexity Low_complexity 1 97 0 5 901 22 0 0 0 chrX 41528628 41528650 -125121646 + AT_rich Low_complexity Low_complexity 1 22 0 5 901 364 212 8 8 chrX 41528803 41528936 -125121360 + (TA)n Simple_repeat Simple_repeat 1 133 0 5 901 1026 328 96 42 chrX 41529053 41529606 -125120690 - Lx8 LINE L1 -129 7344 6762 5 901 360 64 0 0 chrX 41529607 41529654 -125120642 + (TAA)n Simple_repeat Simple_repeat 1 47 0 5 901 1274 312 80 37 chrX 41529671 41530364 -125119932 + L1_Mur3 LINE L1 4743 5468 -412 6 901 243 0 0 0 chrX 41530364 41530391 -125119905 + (TTG)n Simple_repeat Simple_repeat 1 27 0 6 901 2986 120 88 14 chrX 41530399 41530913 -125119383 - Lx LINE L1 -1 6653 6102 6 901 1274 312 80 37 chrX 41530913 41531099 -125119197 + L1_Mur3 LINE L1 5476 5669 -211 6 901 183 156 0 0 chrX 41531120 41531152 -125119144 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 901 7925 90 88 3 chrX 41531618 41532845 -125117451 + L1_Mur1 LINE L1 4118 5448 -438 6 901 21 36 0 0 chrX 41533569 41533597 -125116699 + AT_rich Low_complexity Low_complexity 1 28 0 6 901 405 39 0 0 chrX 41534155 41534206 -125116090 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 901 408 217 21 11 chrX 41534248 41534341 -125115955 - Lx9 LINE L1 -213 7431 7338 6 901 25 31 0 0 chrX 41534980 41535012 -125115284 + AT_rich Low_complexity Low_complexity 1 32 0 6 901 180 0 0 0 chrX 41535264 41535284 -125115012 + (TAA)n Simple_repeat Simple_repeat 1 20 0 6 901 3942 77 26 25 chrX 41535363 41535933 -125114363 + RLTR13B1 LTR ERVK 1 571 -322 7 901 1077 78 0 0 chrX 41535930 41536071 -125114225 + RLTR13B1 LTR ERVK 753 893 0 7 901 448 368 65 4 chrX 41537193 41537422 -125112874 - MER89 LTR ERV1 0 559 317 7 901 367 316 68 65 chrX 41537423 41537731 -125112565 + Lx8 LINE L1 6777 7085 -388 7 901 9476 166 21 12 chrX 41537876 41538546 -125111750 + L1_Mm LINE L1 2376 3051 -2832 7 901 860 0 0 10 chrX 41538546 41538647 -125111649 + (GAA)n Simple_repeat Simple_repeat 3 102 0 7 901 9476 166 21 12 chrX 41538647 41539806 -125110490 + L1_Mm LINE L1 3052 4221 -1662 7 901 3003 94 15 24 chrX 41539902 41540360 -125109936 - L1_Mus3 LINE L1 -11 6627 6174 7 901 2112 114 0 0 chrX 41540682 41540981 -125109315 + ORR1A2 LTR MaLR 29 327 0 7 901 775 175 46 8 chrX 41540981 41541167 -125109129 - RMER6C LTR ERVK -106 650 480 7 901 515 174 0 11 chrX 41541222 41541315 -125108981 - RMER6C LTR ERVK -598 92 1 7 901 35 54 0 0 chrX 41541428 41541484 -125108812 + AT_rich Low_complexity Low_complexity 1 56 0 7 901 364 355 12 72 chrX 41541823 41541990 -125108306 + RSINE1 SINE B4 8 164 -1 7 901 1074 72 0 7 chrX 41542118 41542258 -125108038 - B1_Mm SINE Alu -8 139 1 8 901 239 286 13 0 chrX 41542275 41542352 -125107944 + L1_Rod LINE L1 5329 5406 -441 8 901 473 36 0 0 chrX 41542369 41542425 -125107871 + L1Md_F3 LINE L1 5531 5586 -297 8 901 7930 46 4 4 chrX 41542425 41543409 -125106887 + L1Md_F3 LINE L1 5587 6570 -14 8 901 272 180 48 32 chrX 41543454 41543517 -125106779 + L1M2 LINE L1 5536 5599 -713 8 901 343 299 58 79 chrX 41543521 41543677 -125106619 + B1_Mur4 SINE Alu 1 148 -2 8 901 741 84 0 0 chrX 41543717 41543836 -125106460 + (GA)n Simple_repeat Simple_repeat 2 120 0 8 901 415 310 90 31 chrX 41544016 41544339 -125105957 - L1M4c LINE L1 -3542 2840 2499 8 901 1383 95 112 4 chrX 41544367 41544599 -125105697 - L1_Mus2 LINE L1 -525 6041 5785 8 901 4724 176 16 3 chrX 41544599 41545447 -125104849 + Lx LINE L1 5795 6653 -1 8 901 3248 238 48 21 chrX 41545450 41546256 -125104040 + Lx7 LINE L1 6432 7259 -437 8 901 1069 280 37 19 chrX 41546306 41546630 -125103666 - Lx2B LINE L1 -6 6994 6665 9 901 1504 169 78 0 chrX 41546637 41546933 -125103363 + IAPEY3_LTR LTR ERVK 14 332 0 9 901 1046 188 0 0 chrX 41546938 41547124 -125103172 - Lx3C LINE L1 -320 6656 6471 9 901 1406 161 72 210 chrX 41547193 41547295 -125103001 + RLTR23 LTR ERV1 24 100 -330 9 901 357 0 57 0 chrX 41547295 41547348 -125102948 + (CAA)n Simple_repeat Simple_repeat 2 57 0 9 901 1406 161 72 210 chrX 41547348 41547717 -125102579 + RLTR23 LTR ERV1 101 430 0 9 901 1477 27 11 0 chrX 41548074 41548260 -125102036 + L1Md_F2 LINE L1 6392 6579 -3 9 901 356 349 11 0 chrX 41548426 41548601 -125101695 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 9 901 583 57 0 22 chrX 41549046 41549136 -125101160 + (TTTTC)n Simple_repeat Simple_repeat 3 90 0 9 901 806 258 75 60 chrX 41549138 41549203 -125101093 + Lx7 LINE L1 7356 7420 -276 8 901 462 36 0 0 chrX 41549203 41549259 -125101037 + (TG)n Simple_repeat Simple_repeat 1 56 0 9 901 806 258 75 60 chrX 41549259 41549315 -125100981 + Lx7 LINE L1 7421 7484 -212 8 901 200 34 0 33 chrX 41549315 41549345 -125100951 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 9 901 806 258 75 60 chrX 41549345 41549556 -125100740 + Lx7 LINE L1 7485 7692 -4 8 112 572 303 60 47 chrX 41549792 41550304 -125099992 - L1M4c LINE L1 -4715 1669 1151 8 902 280 214 0 12 chrX 41550752 41550837 -125099459 - L1_Mur3 LINE L1 -513 5367 5284 1 902 41243 8 0 1 chrX 41550833 41557824 -125092472 - L1Md_A LINE L1 0 6582 1 1 902 458 268 198 12 chrX 41557825 41558078 -125092218 - L1_Mur3 LINE L1 -577 5303 5004 1 902 447 19 0 0 chrX 41558090 41558142 -125092154 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 902 931 246 85 30 chrX 41558142 41558291 -125092005 - L1_Mur3 LINE L1 -1295 4585 4424 1 902 2580 160 20 20 chrX 41558291 41558750 -125091546 - RMER6B LTR ERVK -2 459 1 1 902 931 246 85 30 chrX 41558750 41558964 -125091332 - L1_Mur3 LINE L1 -1457 4423 4202 1 902 2752 143 66 0 chrX 41558967 41559435 -125090861 + Lx3A LINE L1 6473 6971 -10 1 902 946 308 3 21 chrX 41559491 41559816 -125090480 + Lx7 LINE L1 5360 5678 -202 1 902 514 217 9 36 chrX 41559825 41559935 -125090361 - B1_Mus1 SINE Alu -6 142 36 1 902 247 331 109 31 chrX 41559935 41559953 -125090343 - ID_B1 SINE B4 -6 218 81 1 902 542 279 25 96 chrX 41559954 41560076 -125090220 + Lx7 LINE L1 5676 5788 -1908 1 902 1071 158 5 5 chrX 41560076 41560261 -125090035 - B2_Mm2 SINE B2 -9 186 2 1 902 542 279 25 96 chrX 41560261 41560380 -125089916 + Lx7 LINE L1 5789 5910 -1786 1 902 252 0 0 0 chrX 41560380 41560408 -125089888 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 902 420 20 0 0 chrX 41560408 41560456 -125089840 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 902 542 279 25 96 chrX 41560456 41560495 -125089801 + Lx7 LINE L1 5911 5944 -1752 1 902 468 0 0 0 chrX 41560495 41560547 -125089749 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 902 542 279 25 96 chrX 41560547 41560628 -125089668 + Lx7 LINE L1 5945 6013 -1683 1 902 3555 35 14 6 chrX 41560688 41561183 -125089113 - L1Md_F3 LINE L1 -559 6025 5527 1 902 5454 48 0 6 chrX 41561183 41561860 -125088436 + L1Md_F2 LINE L1 5909 6581 -1 1 902 432 209 114 63 chrX 41562032 41562076 -125088220 - RMER15 LTR ERVL -105 470 426 1 902 3229 43 5 5 chrX 41562076 41562472 -125087824 - MTA_Mm LTR MaLR 0 396 1 1 902 432 209 114 63 chrX 41562472 41562585 -125087711 - RMER15 LTR ERVL -150 425 305 1 902 328 227 44 35 chrX 41562655 41562769 -125087527 - RMER15 LTR ERVL -460 115 1 1 902 207 301 145 0 chrX 41562932 41563015 -125087281 - L2a LINE L2 -45 3381 3287 1 902 255 264 125 0 chrX 41564087 41564159 -125086137 + ID SINE ID 4 84 -140 1 902 1823 149 51 10 chrX 41564306 41564618 -125085678 + ORR1A3 LTR MaLR 1 325 -1 1 902 28 29 0 0 chrX 41564749 41564784 -125085512 + AT_rich Low_complexity Low_complexity 1 35 0 1 902 21 36 0 0 chrX 41564821 41564849 -125085447 + AT_rich Low_complexity Low_complexity 1 28 0 1 902 272 353 52 111 chrX 41565066 41565078 -125085218 - B4 SINE B4 -68 224 166 1 902 398 333 31 8 chrX 41565078 41565205 -125085091 - B1_Mur1 SINE Alu -10 139 10 1 902 272 353 52 111 chrX 41565205 41565219 -125085077 - B4 SINE B4 -68 165 81 1 902 35 24 0 0 chrX 41565222 41565264 -125085032 + AT_rich Low_complexity Low_complexity 1 42 0 1 902 277 373 57 55 chrX 41565270 41565724 -125084572 - Lx8 LINE L1 -1 7472 7018 1 902 31 58 0 0 chrX 41565855 41565907 -125084389 + AT_rich Low_complexity Low_complexity 1 52 0 1 902 24 32 0 0 chrX 41567109 41567140 -125083156 + AT_rich Low_complexity Low_complexity 1 31 0 1 902 409 252 0 0 chrX 41567341 41567444 -125082852 - L1_Mur1 LINE L1 -810 5076 4974 1 902 4734 79 49 1 chrX 41567446 41568104 -125082192 + L1_Mus3 LINE L1 5944 6632 -6 1 902 2161 312 70 11 chrX 41568957 41569878 -125080418 + Lx8 LINE L1 6109 7083 -390 1 902 47 19 0 0 chrX 41570033 41570087 -125080209 + AT_rich Low_complexity Low_complexity 1 54 0 1 902 287 315 60 31 chrX 41570706 41571102 -125079194 + L1M2a LINE L1 1785 2189 -4909 1 902 293 302 9 94 chrX 41571107 41571213 -125079083 + PB1 SINE Alu 29 125 -2 1 902 263 291 79 36 chrX 41571380 41571519 -125078777 + RMER15 LTR ERVL 65 209 -366 1 902 640 330 12 21 chrX 41571526 41571767 -125078529 - Lx7 LINE L1 -628 7068 6830 1 902 2117 112 27 60 chrX 41571860 41572230 -125078066 + Lx3_Mus LINE L1 6644 7001 -8 1 902 613 311 8 46 chrX 41572250 41572489 -125077807 + RMER15 LTR ERVL 186 415 -160 1 902 222 160 0 0 chrX 41572514 41572564 -125077732 + T-rich Low_complexity Low_complexity 1 50 0 1 902 1074 68 7 7 chrX 41572567 41572714 -125077582 - B1_Mm SINE Alu 0 147 1 1 902 736 319 29 35 chrX 41572761 41573105 -125077191 + Lx9 LINE L1 6878 7219 -425 1 902 284 83 21 0 chrX 41573290 41573338 -125076958 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 902 280 235 0 57 chrX 41573861 41573983 -125076313 + T-rich Low_complexity Low_complexity 2 116 0 1 902 645 301 108 50 chrX 41573992 41574335 -125075961 - Lx8 LINE L1 -478 6995 6633 1 902 23 0 0 0 chrX 41574541 41574564 -125075732 + AT_rich Low_complexity Low_complexity 1 23 0 1 902 450 94 0 0 chrX 41574567 41574631 -125075665 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 902 3839 228 12 5 chrX 41574972 41575819 -125074477 + Lx5 LINE L1 6168 7054 -4 1 902 1459 196 36 45 chrX 41576006 41576338 -125073958 + ORR1A4 LTR MaLR 1 329 0 1 902 402 21 0 0 chrX 41576448 41576495 -125073801 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 902 25 75 0 0 chrX 41577115 41577168 -125073128 + AT_rich Low_complexity Low_complexity 1 53 0 1 902 205 155 0 87 chrX 41577604 41577696 -125072600 + (TTA)n Simple_repeat Simple_repeat 3 86 0 1 902 291 84 72 21 chrX 41577814 41577911 -125072385 + (TA)n Simple_repeat Simple_repeat 1 102 0 1 902 276 77 0 0 chrX 41578330 41578369 -125071927 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 902 22 35 0 0 chrX 41578658 41578687 -125071609 + AT_rich Low_complexity Low_complexity 1 29 0 1 902 248 259 137 75 chrX 41579005 41579151 -125071145 - MLT1E1 LTR MaLR 0 654 500 1 902 24 77 0 0 chrX 41579729 41579781 -125070515 + AT_rich Low_complexity Low_complexity 1 52 0 1 902 292 339 24 8 chrX 41579931 41580056 -125070240 - Lx8 LINE L1 -273 7200 7074 1 902 8411 98 21 45 chrX 41580122 41581433 -125068863 + Lx3_Mus LINE L1 5723 7002 -7 1 902 381 285 158 37 chrX 41581705 41581978 -125068318 - L1M4 LINE L1 -2686 3460 3155 1 902 558 325 24 18 chrX 41583833 41584002 -125066294 + B3A SINE B2 22 191 -7 1 902 935 282 42 87 chrX 41584020 41584110 -125066186 + MTEb LTR MaLR 2 88 -291 1 902 1306 60 0 0 chrX 41584110 41584278 -125066018 + L1_Mus1 LINE L1 6398 6565 -2 1 902 935 282 42 87 chrX 41584278 41584544 -125065752 + MTEb LTR MaLR 89 342 -37 1 902 327 354 81 19 chrX 41584788 41584949 -125065347 + MER47B DNA MER2_type 76 246 -172 1 902 2075 211 12 39 chrX 41586034 41586787 -125063509 + Lx5 LINE L1 5399 6154 -1306 1 902 1245 275 57 25 chrX 41586791 41587194 -125063102 + BGLII_B LTR ERVK 5 420 -21 1 902 7052 38 0 0 chrX 41587194 41588031 -125062265 + L1Md_F2 LINE L1 5744 6580 -2 1 902 2245 254 53 14 chrX 41588057 41588800 -125061496 + Lx5 LINE L1 6185 7049 -1 1 902 369 292 36 36 chrX 41588851 41589018 -125061278 + MusHAL1 LINE L1 434 600 -2112 1 902 22 35 0 0 chrX 41589018 41589047 -125061249 + AT_rich Low_complexity Low_complexity 1 29 0 1 902 36886 28 0 7 chrX 41589174 41594235 -125056061 + L1Md_T LINE L1 569 5586 -297 1 902 8199 39 0 0 chrX 41594235 41595218 -125055078 + L1Md_T LINE L1 5587 6569 -13 1 902 215 31 0 30 chrX 41595221 41595254 -125055042 + (TAAAA)n Simple_repeat Simple_repeat 3 34 0 1 902 3492 173 2 16 chrX 41595410 41596015 -125054281 - RMER6D LTR ERVK -124 596 1 1 902 210 143 0 0 chrX 41596216 41596251 -125054045 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 902 1715 88 26 15 chrX 41596283 41596549 -125053747 - L1_Mus3 LINE L1 0 6638 6370 1 902 343 0 43 0 chrX 41596771 41596818 -125053478 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1 902 1091 66 0 0 chrX 41596818 41596954 -125053342 - B1_Mus2 SINE Alu -10 137 2 1 902 519 17 0 0 chrX 41597503 41597563 -125052733 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 902 319 21 20 20 chrX 41597616 41597665 -125052631 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 902 195 42 0 0 chrX 41597665 41597689 -125052607 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 902 3368 146 28 45 chrX 41598875 41599527 -125050769 - Lx2A LINE L1 -10 6998 6358 1 902 351 0 0 0 chrX 41599976 41600015 -125050281 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 902 21 57 0 0 chrX 41600051 41600086 -125050210 + AT_rich Low_complexity Low_complexity 1 35 0 1 902 1422 196 63 0 chrX 41600469 41600786 -125049510 + L1Md_A LINE L1 205 541 -6183 1 902 2746 47 7 136 chrX 41600787 41601235 -125049061 - RLTR10 LTR ERVK 0 390 1 1 902 8801 16 0 3 chrX 41601237 41602235 -125048061 - RLTR10-int LTR ERVK -3 1984 990 1 902 359 258 39 15 chrX 41602317 41602447 -125047849 - RLTR10-int LTR ERVK -5987 1594 1462 1 902 7923 36 7 8 chrX 41602511 41603470 -125046826 - RLTR10-int LTR ERVK -989 998 41 1 902 2752 47 7 136 chrX 41603480 41603928 -125046368 - RLTR10 LTR ERVK 0 390 1 1 902 3603 119 5 41 chrX 41603928 41604322 -125045974 + L1Md_F3 LINE L1 736 1131 -5593 1 902 4422 68 2 2 chrX 41604322 41604893 -125045403 + L1Md_F3 LINE L1 6014 6584 0 1 902 9107 75 4 11 chrX 41604893 41605757 -125044539 + L1Md_F3 LINE L1 1132 1972 -3911 1 902 377 44 43 14 chrX 41605757 41605826 -125044470 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 1 902 9107 69 4 7 chrX 41605826 41606336 -125043960 + L1Md_F3 LINE L1 1973 2479 -3404 1 902 4974 60 3 0 chrX 41606323 41606959 -125043337 + L1Md_F3 LINE L1 4948 5585 -298 1 902 8235 44 1 0 chrX 41606960 41607956 -125042340 + L1Md_F3 LINE L1 5587 6583 -1 1 902 1987 180 168 83 chrX 41608403 41609039 -125041257 + RMER6C LTR ERVK 1 690 0 1 902 2826 110 98 21 chrX 41609657 41610185 -125040111 + RMER17A2 LTR ERVK 1 569 -337 1 902 10492 89 4 25 chrX 41610186 41611383 -125038913 - L1Md_F2 LINE L1 0 6582 5493 1 902 1154 55 7 0 chrX 41611383 41611528 -125038768 - B1_Mus2 SINE Alu 0 147 2 1 902 23797 97 7 26 chrX 41611528 41614682 -125035614 - L1Md_F2 LINE L1 -391 5492 2357 1 902 4925 141 44 12 chrX 41614670 41615684 -125034612 - L1Md_F2 LINE L1 -5477 1247 210 1 902 40055 15 1 6 chrX 41615730 41622711 -125027585 - L1Md_A LINE L1 0 6582 1 1 902 1699 186 59 16 chrX 41622711 41623092 -125027204 + RMER17A2 LTR ERVK 468 904 -2 1 902 549 317 61 28 chrX 41623292 41623539 -125026757 + MLT1A0 LTR MaLR 109 363 -2 1 902 860 230 31 22 chrX 41623584 41623806 -125026490 - URR1A DNA MER1_type 0 226 3 1 902 23 78 0 0 chrX 41625088 41625139 -125025157 + AT_rich Low_complexity Low_complexity 1 51 0 1 902 37 39 0 0 chrX 41626183 41626234 -125024062 + AT_rich Low_complexity Low_complexity 1 51 0 1 902 1129 102 0 0 chrX 41626820 41626967 -125023329 + B1_Mus1 SINE Alu 2 148 0 1 902 216 158 0 0 chrX 41626968 41627006 -125023290 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1 902 468 0 0 0 chrX 41627833 41627885 -125022411 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 902 289 312 0 59 chrX 41627887 41627972 -125022324 - RSINE1 SINE B4 -65 100 21 1 902 8291 120 71 5 chrX 41628098 41629116 -125021180 - Lx3_Mus LINE L1 0 7009 5932 1 902 351 0 0 0 chrX 41629116 41629155 -125021141 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 902 8291 110 11 7 chrX 41629155 41630400 -125019896 - Lx3_Mus LINE L1 -1078 5931 4657 1 902 25250 115 57 15 chrX 41630400 41631941 -125018355 + L1Md_F2 LINE L1 535 2055 -3828 2 902 2113 27 119 0 chrX 41631941 41632202 -125018094 - RLTR10B LTR ERVK 0 292 1 2 902 25250 94 99 7 chrX 41632202 41635356 -125014940 + L1Md_F2 LINE L1 2056 5585 -298 2 902 7076 89 5 2 chrX 41635357 41636337 -125013959 + L1Md_F2 LINE L1 5587 6569 -13 2 902 190 29 0 81 chrX 41636355 41636392 -125013904 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 902 1365 140 99 10 chrX 41636392 41636695 -125013601 - Lx3_Mus LINE L1 -1225 4661 4332 1 902 31466 66 0 0 chrX 41636775 41641614 -125008682 - L1Md_F2 LINE L1 -4 6578 1741 2 902 16558 108 11 3 chrX 41641609 41644170 -125006126 - Lx3_Mus LINE L1 -1537 4349 1770 1 902 13665 26 0 0 chrX 41644168 41645772 -125004524 + L1Md_T LINE L1 3983 5586 -297 2 902 8289 38 1 0 chrX 41645772 41646767 -125003529 + L1Md_T LINE L1 5587 6582 0 2 902 3662 124 3 16 chrX 41646769 41647486 -125002810 - Lx3_Mus LINE L1 -4116 1770 1093 1 902 2097 82 7 0 chrX 41647486 41647766 -125002530 - L1_Mus2 LINE L1 -1 6565 6284 2 902 3241 209 25 72 chrX 41647766 41648400 -125001896 - Lx3_Mus LINE L1 -5892 1092 4 1 902 474 295 10 113 chrX 41648447 41648642 -125001654 - B3 SINE B2 -1 215 41 2 902 6411 87 2 6 chrX 41648644 41649531 -125000765 - L1Md_F2 LINE L1 -2 6580 5697 2 902 5260 255 22 36 chrX 41649533 41649913 -125000383 - MERVL_2A-int LTR ERVL -691 5070 4706 2 902 6002 145 52 5 chrX 41649913 41650977 -124999319 - Lx3A LINE L1 -8 6973 5860 2 902 5260 255 22 36 chrX 41650977 41651979 -124998317 - MERVL_2A-int LTR ERVL -1056 4705 3707 2 902 1191 209 101 3 chrX 41652004 41652301 -124997995 - MERVL_2A-int LTR ERVL -2849 2912 2587 2 902 314 186 17 0 chrX 41652316 41652375 -124997921 - MERVL_2A-int LTR ERVL -4371 1390 1331 2 902 587 225 0 42 chrX 41652410 41652554 -124997742 + MERVL_2A-int LTR ERVL 1137 1274 -4487 2 902 2150 254 29 43 chrX 41652588 41652839 -124997457 - MERVL_2A-int LTR ERVL -4637 1124 874 2 902 2910 66 3 0 chrX 41652839 41653219 -124997077 - L1Md_T LINE L1 0 6582 6202 2 902 2150 254 29 43 chrX 41653219 41653621 -124996675 - MERVL_2A-int LTR ERVL -4888 873 480 2 902 564 212 87 82 chrX 41653622 41653817 -124996479 - MERVL_2A-int LTR ERVL -5415 346 151 2 902 517 347 11 17 chrX 41654753 41654929 -124995367 + ID_B1 SINE B4 35 209 -15 2 902 22 70 0 0 chrX 41654965 41655008 -124995288 + AT_rich Low_complexity Low_complexity 1 43 0 2 902 187 175 35 0 chrX 41655009 41655066 -124995230 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 902 5976 184 29 106 chrX 41655319 41657019 -124993277 - Lx LINE L1 0 6997 5377 2 902 2932 87 5 2 chrX 41657019 41657423 -124992873 - L1_Mus1 LINE L1 0 6567 6163 2 902 5976 178 11 235 chrX 41657423 41658308 -124991988 - Lx LINE L1 -507 5376 4934 2 902 1232 142 5 14 chrX 41658308 41658522 -124991774 + L1_Mus3 LINE L1 6422 6633 -5 2 902 5976 178 11 235 chrX 41658522 41659494 -124990802 - Lx LINE L1 -950 4933 4005 2 902 31 110 0 0 chrX 41661508 41661644 -124988652 + AT_rich Low_complexity Low_complexity 1 136 0 2 902 6123 203 63 26 chrX 41661656 41662572 -124987724 - Lx5 LINE L1 -8 7042 6076 2 902 225 0 0 0 chrX 41662572 41662597 -124987699 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 902 6123 198 61 33 chrX 41662597 41663303 -124986993 - Lx5 LINE L1 -975 6075 5351 2 902 1349 259 121 3 chrX 41663299 41663678 -124986618 + Lx6 LINE L1 6185 6608 -852 2 902 1653 233 109 120 chrX 41663679 41664623 -124985673 + RMER6C LTR ERVK 19 716 -4 2 902 2941 252 101 8 chrX 41664625 41665407 -124984889 + Lx6 LINE L1 6604 7458 -2 2 902 330 111 18 36 chrX 41665648 41665704 -124984592 - ORR1C2 LTR MaLR 0 384 330 2 902 24 0 0 0 chrX 41665891 41665915 -124984381 + AT_rich Low_complexity Low_complexity 1 24 0 2 902 904 265 102 41 chrX 41666895 41667210 -124983086 - ORR1C2 LTR MaLR -50 334 1 2 902 315 323 38 13 chrX 41667587 41667744 -124982552 - L1M6 LINE L1 -4677 1819 1659 2 902 21 71 0 0 chrX 41667858 41667900 -124982396 + AT_rich Low_complexity Low_complexity 1 42 0 2 902 306 68 0 0 chrX 41668196 41668240 -124982056 + BC1_Mm scRNA scRNA 1 44 -108 2 902 2397 270 132 26 chrX 41668247 41668798 -124981498 + Lx7 LINE L1 6222 6846 -850 2 902 1818 166 8 19 chrX 41668798 41669160 -124981136 - Lx2 LINE L1 0 6997 6640 2 902 2397 233 75 73 chrX 41669160 41669526 -124980770 + Lx7 LINE L1 6837 7466 -230 2 902 258 32 0 0 chrX 41669526 41669557 -124980739 + (TTG)n Simple_repeat Simple_repeat 3 33 0 2 902 304 175 19 178 chrX 41669557 41669660 -124980636 + Lx7 LINE L1 7467 7546 -150 2 902 2748 213 35 22 chrX 41669705 41670305 -124979991 - RMER20B LTR ERVK 0 627 20 2 902 402 327 117 15 chrX 41670432 41670696 -124979600 + MTE-int LTR MaLR 1281 1571 -9 2 902 303 28 0 0 chrX 41670699 41670735 -124979561 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 902 310 250 19 0 chrX 41670745 41670849 -124979447 + Lx9 LINE L1 7533 7638 -6 2 902 1023 242 193 42 chrX 41671097 41671169 -124979127 - MT2A LTR ERVL -8 525 465 2 902 261 0 0 0 chrX 41671169 41671198 -124979098 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 902 225 65 0 0 chrX 41671199 41671230 -124979066 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 902 1023 269 138 58 chrX 41671230 41671702 -124978594 - MT2A LTR ERVL -60 541 1 2 902 1578 171 15 0 chrX 41671723 41671986 -124978310 + Lx4B LINE L1 6351 6617 -441 2 902 541 80 0 0 chrX 41671986 41672061 -124978235 - L1_Mm LINE L1 -3640 2243 2169 2 902 525 43 129 0 chrX 41672061 41672154 -124978142 + L1Md_F2 LINE L1 6475 6579 -3 2 902 1748 193 24 12 chrX 41672197 41672533 -124977763 + Lx4B LINE L1 6612 6951 -107 2 902 1961 226 9 46 chrX 41672549 41673060 -124977236 - RLTR31_Mur LTR ERVK -12 541 96 2 902 207 0 0 0 chrX 41673283 41673306 -124976990 + (T)n Simple_repeat Simple_repeat 1 23 0 2 902 8894 9 0 0 chrX 41673325 41674499 -124975797 - L1Md_T LINE L1 0 6582 5409 2 902 270 0 0 0 chrX 41675384 41675414 -124974882 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 902 187 394 0 46 chrX 41676669 41676778 -124973518 + MIRb SINE MIR 94 197 -71 2 902 1758 254 53 19 chrX 41677937 41678468 -124971828 + Lx4B LINE L1 6411 7055 -3 2 902 3152 203 44 16 chrX 41678581 41679328 -124970968 - L1_Mur3 LINE L1 -1569 4311 3544 2 902 817 202 28 24 chrX 41679330 41679501 -124970795 + RLTR20B3 LTR ERVK 21 177 -400 2 902 445 288 24 0 chrX 41679922 41680047 -124970249 - ORR1D1 LTR MaLR -246 128 1 2 902 284 276 152 31 chrX 41680109 41680219 -124970077 - L1M2 LINE L1 -608 5683 5557 2 902 1216 121 5 21 chrX 41680219 41680413 -124969883 - B2_Mm2 SINE B2 -4 191 1 2 902 284 276 152 31 chrX 41680413 41680526 -124969770 - L1M2 LINE L1 -735 5556 5433 2 902 305 340 88 25 chrX 41680636 41680874 -124969422 - L1M2 LINE L1 -949 5194 4942 2 903 382 241 118 19 chrX 41680925 41681086 -124969210 - Lx8 LINE L1 -2 7471 7295 2 903 973 320 113 11 chrX 41681154 41681631 -124968665 - Lx8 LINE L1 -275 7198 6673 2 903 237 366 20 10 chrX 41682277 41682379 -124967917 - MIRb SINE MIR -105 157 55 2 903 1346 169 30 8 chrX 41682657 41682920 -124967376 - Lx4B LINE L1 -1079 5979 5711 2 903 10061 187 31 5 chrX 41682920 41683756 -124966540 - Lx4B LINE L1 -402 5475 4625 2 903 198 103 0 0 chrX 41683756 41683785 -124966511 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 903 10061 187 31 5 chrX 41683785 41685017 -124965279 - Lx4B LINE L1 -1253 4624 3354 2 903 1356 240 6 3 chrX 41685019 41685357 -124964939 - Lx4B LINE L1 -4136 1750 1412 2 903 23 0 0 0 chrX 41685630 41685653 -124964643 + AT_rich Low_complexity Low_complexity 1 23 0 2 903 23 0 0 0 chrX 41686108 41686131 -124964165 + AT_rich Low_complexity Low_complexity 1 23 0 2 903 21 0 0 0 chrX 41686930 41686951 -124963345 + AT_rich Low_complexity Low_complexity 1 21 0 2 903 32 26 0 0 chrX 41686988 41687027 -124963269 + AT_rich Low_complexity Low_complexity 1 39 0 2 903 26 50 0 0 chrX 41687149 41687189 -124963107 + AT_rich Low_complexity Low_complexity 1 40 0 2 903 5391 112 7 5 chrX 41687414 41688251 -124962045 - L1_Mur1 LINE L1 -1216 4670 3832 2 903 4660 108 25 4 chrX 41688252 41688967 -124961329 + Lx3_Mus LINE L1 6267 6996 -13 2 903 362 281 76 9 chrX 41689246 41689469 -124960827 + L1M5 LINE L1 3841 4078 -2068 2 903 233 357 0 18 chrX 41689878 41689992 -124960304 + GA-rich Low_complexity Low_complexity 4 115 0 2 903 250 259 12 0 chrX 41690085 41690166 -124960130 + Lx9 LINE L1 7532 7613 -31 2 903 201 74 0 0 chrX 41690167 41690194 -124960102 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2 903 366 80 0 0 chrX 41690372 41690422 -124959874 + (CATA)n Simple_repeat Simple_repeat 4 53 0 2 903 869 329 16 0 chrX 41691446 41691750 -124958546 + Lx8 LINE L1 6827 7135 -338 2 903 415 170 40 10 chrX 41692286 41692387 -124957909 - Lx9 LINE L1 -7 7637 7534 2 903 28 61 0 0 chrX 41692432 41692481 -124957815 + AT_rich Low_complexity Low_complexity 1 49 0 2 903 495 261 18 0 chrX 41692481 41692592 -124957704 - B1_Mur1 SINE Alu -1 148 36 2 903 1289 297 96 30 chrX 41693504 41694504 -124955792 + L1M2 LINE L1 1761 2826 -4023 2 903 524 334 73 3 chrX 41694647 41695031 -124955265 + L1M2 LINE L1 3057 3467 -3378 2 903 16581 124 20 3 chrX 41695129 41698215 -124952081 - L1_Mus3 LINE L1 0 6638 3492 2 903 666 0 0 0 chrX 41698215 41698289 -124952007 + (TA)n Simple_repeat Simple_repeat 2 75 0 2 903 16581 139 18 4 chrX 41698289 41698680 -124951616 - L1_Mus3 LINE L1 -2392 3491 3103 2 903 39 38 0 0 chrX 41698731 41698784 -124951512 + AT_rich Low_complexity Low_complexity 1 53 0 2 903 233 270 110 52 chrX 41698834 41699143 -124951153 + L1M2 LINE L1 3733 4059 -2786 2 903 501 294 49 32 chrX 41699346 41699694 -124950602 + L1M2 LINE L1 5652 6005 -840 2 903 1912 144 3 0 chrX 41699802 41700115 -124950181 + Lx2A1 LINE L1 6690 7003 -5 2 903 258 218 0 0 chrX 41700207 41700262 -124950034 - Lx7 LINE L1 -242 7454 7400 2 903 274 164 73 0 chrX 41700254 41700309 -124949987 - Lx6 LINE L1 -406 7054 6996 2 903 266 309 0 67 chrX 41700327 41700462 -124949834 + Lx6 LINE L1 7196 7321 -139 2 903 381 243 18 18 chrX 41700480 41700593 -124949703 - Lx6 LINE L1 -2 7458 7346 2 903 691 180 39 32 chrX 41700581 41700736 -124949560 + Lx6 LINE L1 7301 7456 -4 2 903 350 306 33 60 chrX 41701308 41701607 -124948689 - L1MDa LINE L1 -4703 1930 1640 2 903 340 321 85 11 chrX 41701729 41702104 -124948192 - L1MDa LINE L1 -5165 1468 1066 2 903 21 0 0 0 chrX 41702104 41702125 -124948171 + AT_rich Low_complexity Low_complexity 1 21 0 2 903 59 53 0 0 chrX 41702234 41702328 -124947968 + AT_rich Low_complexity Low_complexity 1 94 0 2 903 801 307 14 0 chrX 41702328 41702546 -124947750 - Lx8 LINE L1 -142 7331 7111 2 903 444 303 22 50 chrX 41702710 41702849 -124947447 - B1_Mur1 SINE Alu -11 138 4 2 903 2625 129 0 5 chrX 41703445 41703858 -124946438 - L1_Mm LINE L1 -511 5372 4962 2 903 1181 107 17 6 chrX 41703842 41704020 -124946276 + L1_Mm LINE L1 5372 5551 -332 2 903 1351 62 0 0 chrX 41704021 41704198 -124946098 - L1Md_F2 LINE L1 -1759 4124 3948 2 903 10753 72 8 7 chrX 41704211 41704296 -124946000 + L1Md_F2 LINE L1 4112 4204 -1679 2 903 522 0 0 0 chrX 41704296 41704354 -124945942 + (TA)n Simple_repeat Simple_repeat 1 58 0 2 903 10753 72 8 7 chrX 41704354 41705740 -124944556 + L1Md_F2 LINE L1 4205 5585 -298 2 903 6920 97 5 7 chrX 41705741 41706737 -124943559 + L1Md_F2 LINE L1 5587 6580 -2 2 903 4968 121 21 0 chrX 41706732 41707500 -124942796 + L1_Mus1 LINE L1 5783 6566 -1 2 903 330 182 0 0 chrX 41707691 41707757 -124942539 + (CA)n Simple_repeat Simple_repeat 2 67 0 2 903 317 75 0 19 chrX 41707877 41707931 -124942365 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 2 903 261 347 58 26 chrX 41707967 41708121 -124942175 - Lx9 LINE L1 -335 7309 7151 2 903 6450 45 16 5 chrX 41708499 41709293 -124941003 + RLTR13B4 LTR ERVK 1 803 0 2 903 357 356 44 59 chrX 41709555 41709758 -124940538 + B4A SINE B4 18 217 -75 2 903 276 346 0 38 chrX 41710261 41710366 -124939930 - MLT1E2 LTR MaLR -151 476 376 2 903 754 190 7 0 chrX 41710378 41710515 -124939781 + B1_Mur3 SINE Alu 1 138 -11 2 903 3745 98 2 11 chrX 41710753 41711301 -124938995 + L1Md_F2 LINE L1 6028 6570 -12 2 903 756 126 0 0 chrX 41712058 41712177 -124938119 + (TATATG)n Simple_repeat Simple_repeat 2 120 0 2 903 27 49 0 0 chrX 41712286 41712327 -124937969 + AT_rich Low_complexity Low_complexity 1 41 0 3 903 531 0 0 0 chrX 41713539 41713598 -124936698 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 903 408 20 0 0 chrX 41713598 41713646 -124936650 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 903 1843 141 53 3 chrX 41715087 41715429 -124934867 - RLTR15 LTR ERVK 0 359 1 3 903 354 45 0 0 chrX 41716430 41716474 -124933822 + (TA)n Simple_repeat Simple_repeat 1 44 0 3 903 27 73 0 0 chrX 41716684 41716739 -124933557 + AT_rich Low_complexity Low_complexity 1 55 0 3 903 389 320 58 42 chrX 41718269 41718458 -124931838 - B3 SINE B2 -14 202 11 3 903 26 0 0 0 chrX 41718672 41718698 -124931598 + AT_rich Low_complexity Low_complexity 1 26 0 3 903 207 100 0 0 chrX 41719161 41719191 -124931105 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 3 903 511 112 20 0 chrX 41719494 41719592 -124930704 + (TC)n Simple_repeat Simple_repeat 1 100 0 3 903 295 224 23 12 chrX 41721191 41721277 -124929019 + (CGG)n Simple_repeat Simple_repeat 2 88 0 3 903 21 36 0 0 chrX 41722916 41722944 -124927352 + AT_rich Low_complexity Low_complexity 1 28 0 3 903 1247 92 0 32 chrX 41723387 41723577 -124926719 - B2_Mm2 SINE B2 -9 186 3 3 903 23 54 0 0 chrX 41723673 41723710 -124926586 + AT_rich Low_complexity Low_complexity 1 37 0 3 903 23 33 0 0 chrX 41724121 41724151 -124926145 + AT_rich Low_complexity Low_complexity 1 30 0 3 903 22 35 0 0 chrX 41724583 41724612 -124925684 + AT_rich Low_complexity Low_complexity 1 29 0 3 903 1435 142 167 22 chrX 41724725 41725049 -124925247 + Lx LINE L1 6284 6654 0 3 903 2292 138 29 0 chrX 41726460 41726838 -124923458 - Lx LINE L1 -6 6648 6260 3 903 226 50 24 24 chrX 41727576 41727617 -124922679 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 3 903 822 211 0 0 chrX 41728234 41728414 -124921882 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 903 990 167 0 0 chrX 41728426 41728606 -124921690 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 903 219 186 0 0 chrX 41728606 41728649 -124921647 + (CATA)n Simple_repeat Simple_repeat 1 43 0 3 903 201 464 40 4 chrX 41728943 41729168 -124921128 + L4 LINE RTE 997 1229 -800 3 903 2971 59 5 32 chrX 41729469 41729870 -124920426 - RLTR10 LTR ERVK 0 390 1 3 903 528 16 0 0 chrX 41730080 41730141 -124920155 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 903 868 311 62 16 chrX 41730271 41730594 -124919702 + L4 LINE RTE 1438 1775 -254 3 903 4983 115 71 2 chrX 41731105 41732434 -124917862 - L1_Mus2 LINE L1 -14 6568 5146 3 903 3125 78 26 0 chrX 41732435 41732861 -124917435 + L1_Mus2 LINE L1 4706 5142 -741 3 903 298 341 100 14 chrX 41732886 41733026 -124917270 + RSINE1 SINE B4 4 155 -10 3 903 1064 139 5 5 chrX 41733602 41733778 -124916518 + Lx3A LINE L1 6794 6969 -12 3 903 198 0 0 0 chrX 41733778 41733800 -124916496 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 3 903 1064 139 5 5 chrX 41733800 41733811 -124916485 + Lx3A LINE L1 6970 6980 -1 3 903 440 273 143 17 chrX 41733817 41733992 -124916304 - FordPrefect DNA Tip100 -356 1327 1131 3 903 347 340 10 10 chrX 41734145 41734246 -124916050 + PB1D10 SINE Alu 10 110 -7 3 903 2538 35 9 6 chrX 41734948 41735264 -124915032 + L1Md_F3 LINE L1 6248 6564 -20 3 903 237 308 18 53 chrX 41736003 41736116 -124914180 - Lx8 LINE L1 -283 7190 7082 3 903 354 74 0 0 chrX 41736349 41736403 -124913893 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 903 423 0 0 0 chrX 41736406 41736453 -124913843 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 903 396 0 68 0 chrX 41736940 41736999 -124913297 + (TTTTG)n Simple_repeat Simple_repeat 3 65 0 3 903 757 93 0 0 chrX 41737000 41737107 -124913189 - B1_Mus2 SINE Alu -12 135 29 3 903 441 0 0 0 chrX 41737645 41737694 -124912602 + (TTA)n Simple_repeat Simple_repeat 3 51 0 3 903 23 0 0 0 chrX 41737869 41737892 -124912404 + AT_rich Low_complexity Low_complexity 1 23 0 3 903 360 0 0 0 chrX 41739730 41739770 -124910526 + (TAGA)n Simple_repeat Simple_repeat 2 41 0 3 903 38283 8 0 0 chrX 41740146 41745732 -124904564 + L1Md_A LINE L1 1 5586 -297 3 903 8975 5 0 0 chrX 41745732 41746728 -124903568 + L1Md_A LINE L1 5587 6582 0 3 903 3554 191 24 11 chrX 41746728 41747391 -124902905 - RLTR17 LTR ERVK -18 674 3 3 903 22 35 0 0 chrX 41747848 41747877 -124902419 + AT_rich Low_complexity Low_complexity 1 29 0 3 903 808 297 125 21 chrX 41748174 41748501 -124901795 - ORR1D2 LTR MaLR 0 370 10 3 903 24 67 0 0 chrX 41749177 41749222 -124901074 + AT_rich Low_complexity Low_complexity 1 45 0 3 903 327 49 0 0 chrX 41749898 41749939 -124900357 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 903 288 77 0 0 chrX 41749936 41749975 -124900321 + (GGA)n Simple_repeat Simple_repeat 3 41 0 3 903 1037 87 7 0 chrX 41749975 41750125 -124900171 + (GAAA)n Simple_repeat Simple_repeat 4 154 0 3 903 301 293 46 20 chrX 41750229 41750382 -124899914 - L1MA6 LINE L1 -253 6047 5891 3 903 7492 174 32 8 chrX 41750400 41751771 -124898525 - Lx2B LINE L1 -6 6994 5591 3 903 2157 127 9 0 chrX 41751782 41752105 -124898191 - L1_Mus4 LINE L1 -41 6595 6270 3 903 2601 161 15 2 chrX 41752099 41752555 -124897741 - Lx2B LINE L1 -314 5572 5111 3 903 542 157 238 8 chrX 41753200 41753322 -124896974 + L1Md_F2 LINE L1 404 553 -6063 3 903 3888 107 18 9 chrX 41753315 41753881 -124896415 + L1Md_F2 LINE L1 5992 6562 -20 3 903 211 106 42 21 chrX 41755003 41755051 -124895245 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 903 1065 96 7 7 chrX 41756065 41756212 -124894084 + B1_Mus1 SINE Alu 2 148 0 3 903 8171 168 17 5 chrX 41756438 41758052 -124892244 + Lx4B LINE L1 5419 7058 0 3 903 29016 95 40 15 chrX 41758072 41763115 -124887181 + L1Md_F2 LINE L1 422 5585 -298 3 903 7611 72 3 2 chrX 41763116 41764107 -124886189 + L1Md_F2 LINE L1 5587 6578 -4 3 903 28 0 0 0 chrX 41764614 41764642 -124885654 + AT_rich Low_complexity Low_complexity 1 28 0 3 903 25 31 0 0 chrX 41764693 41764725 -124885571 + AT_rich Low_complexity Low_complexity 1 32 0 3 903 750 292 80 102 chrX 41764796 41765169 -124885127 - MTE2a LTR MaLR -5 374 10 3 903 410 222 59 8 chrX 41766127 41766245 -124884051 + Lx2B LINE L1 6877 7000 0 3 903 21 0 0 0 chrX 41766417 41766438 -124883858 + AT_rich Low_complexity Low_complexity 1 21 0 3 903 609 78 0 0 chrX 41767018 41767108 -124883188 + L1_Mus2 LINE L1 6476 6565 -1 3 903 21 0 0 0 chrX 41768474 41768495 -124881801 + AT_rich Low_complexity Low_complexity 1 21 0 3 903 1588 163 64 0 chrX 41768829 41769124 -124881172 - L1_Mus3 LINE L1 -4 6634 6321 3 903 3160 133 0 2 chrX 41769126 41769607 -124880689 + L1VL4 LINE L1 339 818 -5484 3 903 921 174 7 0 chrX 41769632 41769781 -124880515 - B1_Mur4 SINE Alu 0 150 1 3 903 39954 19 2 6 chrX 41769792 41775987 -124874309 - L1Md_A LINE L1 0 6582 422 3 903 6464 108 29 14 chrX 41775985 41776411 -124873885 + MusHAL1 LINE L1 595 1021 -2332 3 903 543 31 0 0 chrX 41776411 41776476 -124873820 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 3 903 6464 105 32 15 chrX 41776476 41776522 -124873774 + MusHAL1 LINE L1 1022 1083 -2270 3 903 303 0 64 0 chrX 41776522 41776569 -124873727 + (CAA)n Simple_repeat Simple_repeat 2 51 0 3 903 6464 105 32 15 chrX 41776569 41777192 -124873104 + MusHAL1 LINE L1 1084 1707 -1646 3 903 382 127 0 0 chrX 41777183 41777249 -124873047 + L1Md_F2 LINE L1 5535 5618 -624 3 903 7631 56 8 18 chrX 41777269 41778264 -124872032 + L1Md_F2 LINE L1 5588 6572 -10 3 903 454 152 37 37 chrX 41778266 41778375 -124871921 + L1Md_F3 LINE L1 6476 6584 0 3 903 31 44 0 0 chrX 41778479 41778524 -124871772 + AT_rich Low_complexity Low_complexity 1 45 0 3 903 5609 189 40 9 chrX 41778565 41779694 -124870602 - Lx4A LINE L1 -1 7057 5894 3 903 1022 122 0 7 chrX 41780209 41780357 -124869939 - B1_Mus1 SINE Alu -1 147 1 3 903 21 0 0 0 chrX 41780361 41780382 -124869914 + AT_rich Low_complexity Low_complexity 1 21 0 3 903 312 27 0 0 chrX 41780589 41780626 -124869670 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 903 315 0 0 0 chrX 41780626 41780660 -124869636 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 903 315 315 48 14 chrX 41780841 41780986 -124869310 + L1M3 LINE L1 4555 4704 -1439 3 903 383 273 157 40 chrX 41781078 41781448 -124868848 + L1M3 LINE L1 4832 5244 -896 3 903 590 308 248 37 chrX 41781459 41781754 -124868542 - ORR1D2 LTR MaLR 0 370 2 3 903 2656 182 86 42 chrX 41781791 41782452 -124867844 + RMER6C LTR ERVK 1 690 0 3 903 349 280 144 0 chrX 41782493 41782611 -124867685 + MTE2a LTR MaLR 3 137 -242 3 903 499 316 26 13 chrX 41782666 41782820 -124867476 + MT2A LTR ERVL 243 398 -135 3 903 271 300 91 0 chrX 41782875 41782985 -124867311 + B3A SINE B2 14 133 -65 3 903 215 200 33 0 chrX 41783016 41783076 -124867220 + A-rich Low_complexity Low_complexity 3 64 0 3 903 25 31 0 0 chrX 41783106 41783138 -124867158 + AT_rich Low_complexity Low_complexity 1 32 0 3 903 291 283 79 28 chrX 41783835 41784013 -124866283 - L1_Rod LINE L1 -57 5790 5604 3 903 228 382 87 12 chrX 41784673 41784845 -124865451 + MLT1C LTR MaLR 204 388 -79 3 903 352 0 20 20 chrX 41785018 41785067 -124865229 + (TAAAA)n Simple_repeat Simple_repeat 2 50 0 3 903 216 0 0 0 chrX 41786733 41786757 -124863539 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 3 903 3925 149 54 11 chrX 41786879 41787522 -124862774 - Lx2 LINE L1 0 6997 6338 3 903 189 0 0 0 chrX 41787522 41787543 -124862753 + (TGGG)n Simple_repeat Simple_repeat 2 22 0 3 903 3925 149 54 11 chrX 41787543 41787604 -124862692 - Lx2 LINE L1 -660 6337 6265 3 903 24 0 0 0 chrX 41788744 41788768 -124861528 + AT_rich Low_complexity Low_complexity 1 24 0 3 903 37985 14 0 7 chrX 41789547 41794950 -124855346 + L1Md_A LINE L1 225 5586 -297 3 903 8705 19 0 0 chrX 41794950 41795946 -124854350 + L1Md_A LINE L1 5587 6582 0 3 903 186 43 0 0 chrX 41796013 41796036 -124854260 + (A)n Simple_repeat Simple_repeat 1 23 0 3 903 271 370 59 0 chrX 41796090 41796225 -124854071 + B1_Mur1 SINE Alu 1 143 -6 3 903 26 48 0 45 chrX 41796269 41796335 -124853961 + AT_rich Low_complexity Low_complexity 1 63 0 3 903 323 312 211 19 chrX 41796592 41796801 -124853495 + L2 LINE L2 2637 2885 -534 3 903 211 273 0 0 chrX 41797245 41797289 -124853007 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 903 271 90 64 0 chrX 41797379 41797457 -124852839 + (TA)n Simple_repeat Simple_repeat 1 83 0 3 903 614 329 29 42 chrX 41797533 41797771 -124852525 + B4 SINE B4 58 292 0 3 903 240 200 0 0 chrX 41797773 41797823 -124852473 + GA-rich Low_complexity Low_complexity 1 50 0 4 903 21 95 0 0 chrX 41798018 41798081 -124852215 + AT_rich Low_complexity Low_complexity 1 63 0 4 903 17435 166 11 14 chrX 41798775 41802738 -124847558 + L1VL4 LINE L1 419 4352 -1531 4 903 3148 42 37 0 chrX 41802738 41803120 -124847176 - MTA_Mm LTR MaLR 0 396 1 4 903 5830 160 81 20 chrX 41803120 41803211 -124847085 - MTA_Mm-int LTR MaLR 0 1258 1143 4 903 3258 70 2 7 chrX 41803211 41803645 -124846651 + L1Md_F2 LINE L1 6136 6567 -15 4 903 5830 160 81 20 chrX 41803645 41804737 -124845559 - MTA_Mm-int LTR MaLR -116 1142 3 4 903 3229 48 5 2 chrX 41804737 41805132 -124845164 - MTA_Mm LTR MaLR 0 396 1 4 903 5660 148 3 3 chrX 41805132 41806096 -124844200 + L1VL4 LINE L1 4348 5311 -572 4 903 1845 104 3 86 chrX 41806097 41806423 -124843873 + L1_Mus2 LINE L1 6262 6560 -6 4 903 23 0 0 0 chrX 41806423 41806446 -124843850 + AT_rich Low_complexity Low_complexity 1 23 0 4 903 494 177 0 51 chrX 41806886 41807023 -124843273 - Lx3A LINE L1 -5 6976 6847 4 903 11384 91 19 31 chrX 41807035 41808918 -124841378 + Lx3_Mus LINE L1 4128 5969 -1040 4 903 3966 233 62 17 chrX 41809036 41810071 -124840225 - Lx9 LINE L1 -22 7622 6542 4 903 607 238 28 14 chrX 41810073 41810218 -124840078 - B1_Mus2 SINE Alu 0 147 1 4 903 684 74 0 0 chrX 41810263 41810358 -124839938 + (TCTA)n Simple_repeat Simple_repeat 2 96 0 4 903 727 247 91 0 chrX 41810363 41810549 -124839747 + Lx9 LINE L1 7052 7254 -390 4 903 387 180 0 0 chrX 41810557 41810668 -124839628 + (TA)n Simple_repeat Simple_repeat 1 111 0 4 903 210 143 0 0 chrX 41810887 41810922 -124839374 + (GGA)n Simple_repeat Simple_repeat 2 36 0 4 903 222 316 37 25 chrX 41811314 41811395 -124838901 - B4A SINE B4 -183 109 28 4 903 283 312 52 10 chrX 41811600 41811697 -124838599 + RSINE1 SINE B4 32 132 -33 4 903 546 43 0 0 chrX 41811706 41811775 -124838521 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 112 609 341 115 9 chrX 41811791 41812428 -124837868 + L1MB5 LINE L1 5299 6002 -172 4 904 547 351 96 43 chrX 41812493 41812931 -124837365 - MER21B LTR ERV1 -20 843 383 4 904 494 325 166 24 chrX 41812993 41813204 -124837092 - MER21B LTR ERV1 -601 262 22 4 904 226 211 26 44 chrX 41813348 41813462 -124836834 + L1MB5 LINE L1 6068 6179 -1 4 904 302 307 89 30 chrX 41813534 41813702 -124836594 + L1MB7 LINE L1 5874 6051 -133 4 904 3289 26 0 0 chrX 41813961 41814344 -124835952 - L1Md_T LINE L1 -258 6324 5942 4 904 2002 52 0 0 chrX 41814344 41814595 -124835701 + L1Md_A LINE L1 6332 6582 0 4 904 21 0 0 0 chrX 41815678 41815699 -124834597 + AT_rich Low_complexity Low_complexity 1 21 0 4 904 439 317 102 37 chrX 41816061 41816248 -124834048 + B4A SINE B4 2 200 -92 4 904 727 176 7 0 chrX 41816249 41816402 -124833894 + Lx LINE L1 6496 6649 -5 4 904 2228 229 5 2 chrX 41817083 41817507 -124832789 - Lx5 LINE L1 -144 6906 6482 4 904 31 44 0 0 chrX 41817508 41817553 -124832743 + AT_rich Low_complexity Low_complexity 1 45 0 4 904 318 50 0 0 chrX 41817599 41817639 -124832657 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 904 473 0 0 17 chrX 41818701 41818759 -124831537 + (TTTTG)n Simple_repeat Simple_repeat 2 58 0 4 904 771 194 0 0 chrX 41818759 41818883 -124831413 - B1_Mur2 SINE Alu -11 138 15 4 904 5832 47 3 4 chrX 41818884 41819613 -124830683 + L1Md_F3 LINE L1 5854 6581 -3 4 904 200 167 0 20 chrX 41820591 41820640 -124829656 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 904 1909 291 60 42 chrX 41820644 41821449 -124828847 - Lx7 LINE L1 -388 7308 6490 4 904 683 234 45 0 chrX 41821465 41821619 -124828677 - URR1B DNA MER1_type 0 225 65 4 904 3658 128 48 8 chrX 41821747 41822354 -124827942 + Lx LINE L1 6023 6653 -1 4 904 438 20 0 0 chrX 41822581 41822632 -124827664 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 904 288 0 0 0 chrX 41822634 41822666 -124827630 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 904 378 159 0 0 chrX 41822672 41822741 -124827555 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 904 27 0 0 0 chrX 41824477 41824504 -124825792 + AT_rich Low_complexity Low_complexity 1 27 0 4 904 25 53 0 18 chrX 41825422 41825453 -124824843 + AT_rich Low_complexity Low_complexity 1 31 0 4 904 1029 89 0 0 chrX 41825453 41825599 -124824697 - L1_Mus2 LINE L1 0 6566 6421 4 904 25 53 0 18 chrX 41825599 41825624 -124824672 + AT_rich Low_complexity Low_complexity 1 25 0 4 904 187 31 62 0 chrX 41826077 41826109 -124824187 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 904 370 382 82 5 chrX 41826185 41826242 -124824054 + B3 SINE B2 12 71 -145 4 904 357 62 0 0 chrX 41826242 41826290 -124824006 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 904 370 382 82 5 chrX 41826290 41826416 -124823880 + B3 SINE B2 72 208 -8 4 904 368 319 26 52 chrX 41826778 41826919 -124823377 - B1F SINE Alu -9 140 3 4 904 806 133 6 6 chrX 41828046 41828205 -124822091 - Lx LINE L1 -2 6995 6837 4 904 219 103 0 0 chrX 41828501 41828540 -124821756 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 904 2310 185 13 11 chrX 41828613 41829072 -124821224 - Lx LINE L1 -6 6648 6189 4 904 261 281 36 12 chrX 41829179 41829262 -124821034 - Lx7 LINE L1 -402 7294 7210 4 904 7887 63 14 1 chrX 41829351 41831044 -124819252 - L1Md_F3 LINE L1 -12 6572 4858 4 904 12943 48 8 1 chrX 41831045 41832687 -124817609 + L1Md_F3 LINE L1 3190 4844 -1039 4 904 439 295 58 0 chrX 41832701 41832840 -124817456 - Lx6 LINE L1 -169 7291 7145 4 904 237 65 0 0 chrX 41832840 41832871 -124817425 + (CAAAA)n Simple_repeat Simple_repeat 4 34 0 4 904 270 359 8 8 chrX 41832872 41832990 -124817306 - Lx6 LINE L1 -310 7150 7033 4 904 1087 167 9 19 chrX 41833031 41833245 -124817051 - Lx2A1 LINE L1 -2 7006 6795 4 904 3643 96 23 2 chrX 41833245 41833808 -124816488 - L1_Mur1 LINE L1 -84 5802 5228 4 904 7321 42 2 4 chrX 41833785 41834728 -124815568 - L1Md_F2 LINE L1 -2 6580 5662 4 904 273 100 20 0 chrX 41834720 41834770 -124815526 - L1_Mur1 LINE L1 -640 5246 5196 4 904 244 333 64 11 chrX 41835660 41835754 -124814542 - B1F SINE Alu -9 140 42 4 904 216 203 16 48 chrX 41835761 41835823 -124814473 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 904 357 103 0 49 chrX 41835823 41835884 -124814412 + HAL1-3A_ME LINE L1 1973 2030 -828 4 904 255 184 30 30 chrX 41835926 41836027 -124814269 + (TATATG)n Simple_repeat Simple_repeat 2 102 0 4 904 252 154 0 0 chrX 41836398 41836450 -124813846 + GA-rich Low_complexity Low_complexity 4 55 0 4 904 3413 110 46 0 chrX 41836598 41837098 -124813198 - L1_Mus3 LINE L1 -3 6635 6113 4 904 6220 139 31 2 chrX 41837098 41838218 -124812078 + L1Md_F2 LINE L1 4435 5622 -2373 4 904 9080 66 23 23 chrX 41838395 41840066 -124810230 - L1Md_F2 LINE L1 -415 6167 4517 4 904 2449 124 28 10 chrX 41840068 41840458 -124809838 + L1Md_F2 LINE L1 6186 6582 0 4 904 3761 124 52 44 chrX 41840463 41840766 -124809530 - RMER19A LTR ERVK -99 638 345 4 904 1288 104 10 5 chrX 41840766 41840968 -124809328 - L1_Mus2 LINE L1 0 6566 6364 4 904 3761 124 52 44 chrX 41840968 41841297 -124808999 - RMER19A LTR ERVK -393 344 1 4 904 25 31 0 0 chrX 41841413 41841445 -124808851 + AT_rich Low_complexity Low_complexity 1 32 0 4 904 33861 34 0 0 chrX 41842401 41848020 -124802276 + L1Md_T LINE L1 1 5589 -297 4 904 9056 4 0 0 chrX 41848020 41849016 -124801280 + L1Md_T LINE L1 5590 6585 0 4 904 369 311 59 26 chrX 41849022 41849174 -124801122 + L1MC LINE L1 3028 3184 -2962 4 904 297 375 9 55 chrX 41849180 41849290 -124801006 + B3 SINE B2 27 131 -85 4 904 770 363 32 8 chrX 41849517 41849987 -124800309 - Lx8 LINE L1 -608 6865 6385 4 904 7092 56 14 4 chrX 41849990 41851403 -124798893 - L1Md_F2 LINE L1 0 6582 5148 4 904 304 318 16 8 chrX 41851393 41851520 -124798776 - Lx8 LINE L1 -1064 6409 6282 4 904 3141 189 35 16 chrX 41851758 41852386 -124797910 + Lx2 LINE L1 6358 6997 0 4 904 26 74 0 0 chrX 41852570 41852624 -124797672 + AT_rich Low_complexity Low_complexity 1 54 0 4 904 266 262 35 23 chrX 41852812 41852984 -124797312 + (AACTG)n Simple_repeat Simple_repeat 5 178 0 4 904 289 309 59 0 chrX 41853039 41853107 -124797189 - PB1D9 SINE Alu -46 74 3 4 904 494 167 42 136 chrX 41853107 41853197 -124797099 - MT2B LTR ERVL -342 259 181 4 904 735 138 9 0 chrX 41853182 41853291 -124797005 - RMER6C LTR ERVK -580 110 1 4 904 854 89 7 0 chrX 41853598 41853733 -124796563 - L1_Mus4 LINE L1 -5 6631 6496 4 904 1812 211 57 27 chrX 41854272 41854596 -124795700 + RMER6D LTR ERVK 1 341 -379 4 904 258 32 0 0 chrX 41854596 41854627 -124795669 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 904 1812 194 37 175 chrX 41854627 41854707 -124795589 + RMER6D LTR ERVK 312 416 -304 4 904 183 80 0 0 chrX 41854707 41854732 -124795564 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 904 1800 204 38 182 chrX 41854732 41855052 -124795244 + RMER6D LTR ERVK 351 629 -91 4 904 273 57 0 0 chrX 41855052 41855087 -124795209 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 904 1154 234 41 203 chrX 41855087 41855217 -124795079 + RMER6D LTR ERVK 630 719 -1 4 904 40 21 0 0 chrX 41855382 41855429 -124794867 + AT_rich Low_complexity Low_complexity 1 47 0 4 904 37 62 0 0 chrX 41855712 41855777 -124794519 + AT_rich Low_complexity Low_complexity 1 65 0 4 904 21 57 0 0 chrX 41856318 41856353 -124793943 + AT_rich Low_complexity Low_complexity 1 35 0 4 904 198 0 0 0 chrX 41856470 41856492 -124793804 + (TA)n Simple_repeat Simple_repeat 2 23 0 4 904 7873 131 48 1 chrX 41857150 41858183 -124792113 - Lx3_Mus LINE L1 -10 6999 5925 4 904 369 0 0 0 chrX 41858183 41858224 -124792072 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 4 904 16039 108 16 31 chrX 41858224 41859077 -124791219 - Lx3_Mus LINE L1 -1085 5924 5070 4 904 4228 134 121 76 chrX 41859077 41859540 -124790756 - RMER17A2 LTR ERVK 0 906 477 4 904 620 26 13 0 chrX 41859540 41859618 -124790678 + (GA)n Simple_repeat Simple_repeat 1 79 0 4 904 4228 134 121 76 chrX 41859618 41860021 -124790275 - RMER17A2 LTR ERVK -430 476 1 4 904 16039 108 16 31 chrX 41860021 41860484 -124789812 - Lx3_Mus LINE L1 -817 5069 4636 4 904 309 26 0 0 chrX 41860484 41860522 -124789774 + (TTG)n Simple_repeat Simple_repeat 2 39 0 4 904 16039 108 16 31 chrX 41860522 41861693 -124788603 - Lx3_Mus LINE L1 -1251 4635 3460 4 904 5600 157 28 3 chrX 41861693 41862628 -124787668 + RMER17B LTR ERVK 1 958 0 4 904 16039 108 16 31 chrX 41862628 41862919 -124787377 - Lx3_Mus LINE L1 -2427 3459 3173 4 904 7168 134 13 19 chrX 41862919 41864925 -124785371 + L1_Mus1 LINE L1 5032 6995 -2 4 904 201 162 0 0 chrX 41864926 41864963 -124785333 + A-rich Low_complexity Low_complexity 1 37 0 4 904 186 43 0 0 chrX 41865039 41865062 -124785234 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 904 398 352 0 0 chrX 41865206 41865314 -124784982 + RSINE1 SINE B4 29 136 -29 4 904 246 164 32 16 chrX 41865433 41865495 -124784801 - Lx9 LINE L1 -6 7638 7576 4 904 290 88 0 50 chrX 41865547 41865607 -124784689 + (A)n Simple_repeat Simple_repeat 1 57 0 4 904 349 204 208 33 chrX 41865806 41866007 -124784289 - Lx9 LINE L1 -2 7642 7407 4 904 5642 229 40 14 chrX 41866052 41867440 -124782856 - Lx5 LINE L1 0 7050 5627 5 904 1826 189 16 16 chrX 41867438 41867826 -124782470 + Lx5 LINE L1 5226 5613 -264 5 904 675 128 0 0 chrX 41867829 41867938 -124782358 + (TTTC)n Simple_repeat Simple_repeat 4 112 0 5 904 3769 138 62 5 chrX 41867970 41868612 -124781684 - Lx3A LINE L1 -1 6980 6302 5 904 430 19 0 0 chrX 41868612 41868666 -124781630 + MT-int LTR MaLR 656 709 -389 5 904 3114 19 5 4 chrX 41868643 41869031 -124781265 + MT-int LTR MaLR 659 1024 -74 5 904 33928 50 3 14 chrX 41869032 41874220 -124776076 + L1Md_T LINE L1 511 5585 -298 5 904 8019 53 2 0 chrX 41874221 41875214 -124775082 + L1Md_T LINE L1 5587 6581 -1 5 904 606 46 0 0 chrX 41875214 41875301 -124774995 + MTA_Mm-int LTR MaLR 1012 1098 0 5 904 3473 18 5 0 chrX 41875301 41875695 -124774601 + MTA_Mm LTR MaLR 1 396 0 5 904 692 204 240 91 chrX 41875695 41875991 -124774305 + RMER6A LTR ERVK 25 364 -326 5 904 624 27 0 0 chrX 41876119 41876193 -124774103 + (TTTC)n Simple_repeat Simple_repeat 3 76 0 5 904 5658 174 29 3 chrX 41876193 41877791 -124772505 - Lx LINE L1 -12 6642 5003 5 904 8045 153 12 37 chrX 41877787 41879424 -124770872 + L1_Mur2 LINE L1 3400 4995 -882 5 904 875 225 41 87 chrX 41879436 41879815 -124770481 + RMER6A LTR ERVK 380 716 -4 5 904 361 310 103 8 chrX 41880533 41880650 -124769646 - RSINE1 SINE B4 -25 140 13 5 904 303 357 40 10 chrX 41880963 41881161 -124769135 + Lx8 LINE L1 7148 7351 -122 5 904 1070 90 28 0 chrX 41881346 41881490 -124768806 + B1_Mus1 SINE Alu 1 148 0 5 904 543 151 0 0 chrX 41881492 41881585 -124768711 + A-rich Low_complexity Low_complexity 1 93 0 5 904 39 22 0 0 chrX 41882289 41882335 -124767961 + AT_rich Low_complexity Low_complexity 1 46 0 5 904 969 49 21 7 chrX 41882427 41882571 -124767725 + (TTTC)n Simple_repeat Simple_repeat 3 148 0 5 904 452 354 10 10 chrX 41883063 41883257 -124767039 - Lx8 LINE L1 -216 7257 7064 5 904 3372 200 42 13 chrX 41883290 41883963 -124766333 - RLTR17 LTR ERVK 0 692 1 5 904 1737 213 52 21 chrX 41884130 41884596 -124765700 - Lx5 LINE L1 -794 6256 5777 5 904 2112 237 15 4 chrX 41884590 41885068 -124765228 + Lx5 LINE L1 6253 6735 -315 5 904 1086 111 5 37 chrX 41885068 41885255 -124765041 + L1Md_F2 LINE L1 6401 6581 -1 5 904 281 94 38 0 chrX 41885410 41885463 -124764833 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 5 904 575 306 1 66 chrX 41885552 41885850 -124764446 - Lx7 LINE L1 -1871 5825 5511 5 904 1903 114 227 0 chrX 41885871 41886312 -124763984 - Lx3_Mus LINE L1 -412 6597 6057 5 904 2769 124 20 16 chrX 41886312 41886754 -124763542 + Lx3A LINE L1 6538 6981 0 5 904 862 158 17 6 chrX 41886756 41886928 -124763368 + GA-rich Low_complexity Low_complexity 4 177 0 5 904 3370 260 94 22 chrX 41887184 41888417 -124761879 - Lx9 LINE L1 -164 7480 6159 5 904 1965 258 67 31 chrX 41888450 41889362 -124760934 + Lx9 LINE L1 5039 6028 -1616 5 904 317 329 141 9 chrX 41889543 41889770 -124760526 - L1M4 LINE L1 -3316 2830 2574 5 904 1968 262 48 8 chrX 41889872 41890369 -124759927 - MERVL_2A-int LTR ERVL -4590 1171 655 5 904 394 191 0 0 chrX 41890376 41890444 -124759852 + ORR1B2 LTR MaLR 1 68 -299 5 904 2667 245 48 105 chrX 41890590 41891568 -124758728 - RMER17B LTR ERVK -32 926 5 5 904 282 294 173 74 chrX 41891628 41891705 -124758591 + MT2A LTR ERVL 1 94 -439 5 904 405 0 0 0 chrX 41891705 41891750 -124758546 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 5 904 282 294 173 74 chrX 41891750 41891903 -124758393 + MT2A LTR ERVL 95 253 -280 5 904 419 381 13 0 chrX 41891916 41892071 -124758225 + MT2A LTR ERVL 306 462 -71 5 904 1481 264 102 22 chrX 41892334 41892826 -124757470 - MT2A LTR ERVL -2 531 1 5 904 29 0 0 0 chrX 41892999 41893028 -124757268 + AT_rich Low_complexity Low_complexity 1 29 0 5 904 946 108 11 22 chrX 41893095 41893275 -124757021 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 5 904 1216 54 0 0 chrX 41893802 41893949 -124756347 + B1_Mus2 SINE Alu 1 147 0 5 904 1307 281 81 45 chrX 41894124 41894790 -124755506 - L1_Rod LINE L1 -1171 4676 3987 5 904 1010 288 79 24 chrX 41894846 41895315 -124754981 + L1_Rod LINE L1 5128 5622 -225 5 904 275 0 29 0 chrX 41895497 41895532 -124754764 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 5 904 204 200 0 0 chrX 41895973 41896018 -124754278 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 904 22 88 0 0 chrX 41897542 41897599 -124752697 + AT_rich Low_complexity Low_complexity 1 57 0 5 904 7481 147 54 4 chrX 41897809 41899487 -124750809 - Lx3B LINE L1 0 6973 5209 5 904 1726 122 4 4 chrX 41899486 41899757 -124750539 + Lx3B LINE L1 4957 5227 -659 5 904 366 179 0 0 chrX 41900141 41900236 -124750060 + (CA)n Simple_repeat Simple_repeat 1 95 0 5 904 1338 244 71 34 chrX 41900562 41900692 -124749604 - Lx9 LINE L1 -1706 5938 5775 5 904 2993 23 6 0 chrX 41900692 41901036 -124749260 - ORR1A0 LTR MaLR 0 346 1 5 904 1338 236 58 33 chrX 41901036 41901402 -124748894 - Lx9 LINE L1 -73 5774 5430 5 904 4941 194 27 20 chrX 41901401 41902572 -124747724 + Lx5 LINE L1 5417 6612 -438 5 904 309 82 0 0 chrX 41902577 41902626 -124747670 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 5 904 1126 252 69 9 chrX 41902629 41902946 -124747350 + Lx5 LINE L1 6715 7050 0 5 904 793 268 101 26 chrX 41902962 41903307 -124746989 - Lx9 LINE L1 -462 5385 5015 5 904 1076 90 0 0 chrX 41903383 41903528 -124746768 - B1_Mus2 SINE Alu -2 145 1 5 904 252 59 0 0 chrX 41903570 41903604 -124746692 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 5 904 1092 94 0 12 chrX 41903604 41903765 -124746531 - B2_Mm2 SINE B2 -34 161 3 5 904 3678 168 21 6 chrX 41903777 41904434 -124745862 - Lx2B LINE L1 0 7000 6334 5 904 1502 99 27 0 chrX 41904435 41904657 -124745639 - L1_Mus4 LINE L1 -621 6015 5788 5 904 7602 84 5 25 chrX 41904674 41906054 -124744242 - L1_Mus1 LINE L1 0 6567 5237 5 904 3888 138 16 5 chrX 41906054 41906674 -124743622 + L1_Mus4 LINE L1 6008 6634 -2 5 904 1323 152 0 0 chrX 41906689 41906899 -124743397 - Lx2B LINE L1 -653 6347 6138 5 904 344 129 48 16 chrX 41907339 41907402 -124742894 + HAL1-3A_ME LINE L1 1963 2027 -831 5 904 34 72 0 0 chrX 41908327 41908396 -124741900 + AT_rich Low_complexity Low_complexity 1 69 0 5 904 1197 144 58 13 chrX 41908710 41908935 -124741361 + Lx LINE L1 6409 6643 -11 5 904 537 16 0 0 chrX 41909127 41909189 -124741107 + (TA)n Simple_repeat Simple_repeat 1 62 0 5 904 531 155 10 0 chrX 41909517 41909620 -124740676 - L1_Mur1 LINE L1 -3556 2330 2227 5 904 342 0 0 0 chrX 41909623 41909661 -124740635 + (TC)n Simple_repeat Simple_repeat 2 39 0 5 904 324 211 0 0 chrX 41909661 41909732 -124740564 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 5 904 437 139 25 0 chrX 41909734 41909813 -124740483 + Lx3C LINE L1 3172 3252 -2634 5 904 3936 163 11 14 chrX 41909803 41909948 -124740348 + Lx3C LINE L1 3726 3869 -2017 5 904 4229 156 48 95 chrX 41909948 41910396 -124739900 + RMER17A2 LTR ERVK 1 445 -461 5 904 636 70 0 0 chrX 41910396 41910482 -124739814 + (TC)n Simple_repeat Simple_repeat 1 86 0 5 904 4229 156 48 95 chrX 41910482 41910983 -124739313 + RMER17A2 LTR ERVK 446 905 -1 5 904 3936 163 11 14 chrX 41910983 41911602 -124738694 + Lx3C LINE L1 3870 4487 -1399 5 904 7893 154 17 7 chrX 41911614 41913438 -124736858 + Lx3C LINE L1 5139 6975 -1 5 904 35718 14 62 7 chrX 41914440 41920287 -124730009 - L1Md_A LINE L1 0 6582 413 5 904 930 58 0 0 chrX 41920460 41920581 -124729715 + (TA)n Simple_repeat Simple_repeat 1 121 0 5 904 7386 66 11 12 chrX 41920627 41921715 -124728581 - L1Md_F2 LINE L1 -23 6559 5471 5 904 4120 97 8 2 chrX 41921715 41922303 -124727993 - RLTR13B1 LTR ERVK -301 592 1 5 904 27037 94 22 2 chrX 41922303 41925579 -124724717 - L1Md_F2 LINE L1 -630 5253 1903 5 904 210 37 0 0 chrX 41925579 41925606 -124724690 + (TTG)n Simple_repeat Simple_repeat 1 27 0 5 904 27037 94 11 1 chrX 41925606 41927137 -124723159 - L1Md_F2 LINE L1 -3981 1902 364 5 904 1393 243 168 6 chrX 41927185 41927535 -124722761 + Lx9 LINE L1 7090 7516 -128 5 904 279 79 0 0 chrX 41927535 41927573 -124722723 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 904 1393 243 168 6 chrX 41927573 41927699 -124722597 + Lx9 LINE L1 7517 7643 -1 5 904 260 282 0 0 chrX 41927990 41928061 -124722235 + (CATA)n Simple_repeat Simple_repeat 1 71 0 5 904 1058 96 34 6 chrX 41928429 41928607 -124721689 - Lx3_Mus LINE L1 -8 7001 6819 5 904 3913 103 0 0 chrX 41928609 41929245 -124721051 - Lx3_Mus LINE L1 -1026 5983 5351 5 904 324 0 0 0 chrX 41929275 41929311 -124720985 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 904 2000 328 74 51 chrX 41929320 41930575 -124719721 + RMER15-int LTR ERVL 277 1560 -3439 5 904 1270 288 27 10 chrX 41931792 41932202 -124718094 - MTD LTR MaLR -2 417 1 5 904 216 97 0 0 chrX 41932769 41932800 -124717496 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 904 22 0 0 0 chrX 41932960 41932982 -124717314 + AT_rich Low_complexity Low_complexity 1 22 0 5 904 593 291 1 12 chrX 41933484 41933632 -124716664 + B3 SINE B2 5 141 -52 5 904 25 0 0 0 chrX 41933990 41934015 -124716281 + AT_rich Low_complexity Low_complexity 1 25 0 5 904 234 62 0 0 chrX 41934309 41934341 -124715955 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 904 391 319 0 50 chrX 41934853 41934952 -124715344 + ID_B1 SINE B4 9 102 -122 5 904 260 205 0 67 chrX 41935665 41935754 -124714542 + (TATATG)n Simple_repeat Simple_repeat 1 83 0 5 904 23 0 0 0 chrX 41937533 41937556 -124712740 + AT_rich Low_complexity Low_complexity 1 23 0 5 904 30 59 0 0 chrX 41937685 41937736 -124712560 + AT_rich Low_complexity Low_complexity 1 51 0 5 904 32 26 0 0 chrX 41937840 41937879 -124712417 + AT_rich Low_complexity Low_complexity 1 39 0 5 904 501 218 14 37 chrX 41938634 41938777 -124711519 - ORR1B2 LTR MaLR -226 152 4 5 904 382 345 0 9 chrX 41938822 41938936 -124711360 - MTD LTR MaLR -20 399 287 5 904 1130 274 66 6 chrX 41938953 41939287 -124711009 + ORR1D2 LTR MaLR 9 362 -8 5 904 4822 220 97 33 chrX 41939298 41940541 -124709755 + RMER12 LTR ERVK 1 1322 0 5 904 329 358 73 0 chrX 41940580 41940745 -124709551 - MTD LTR MaLR -240 179 3 5 904 2993 128 34 11 chrX 41941504 41942042 -124708254 + MusHAL1 LINE L1 713 1262 -1450 5 1 7890 58 3 0 chrX 41942039 41943212 -124707084 - L1Md_F2 LINE L1 -3 6579 5403 5 905 1939 140 27 0 chrX 41943254 41943583 -124706713 + MusHAL1 LINE L1 1249 1586 -1126 5 905 6937 38 7 1 chrX 41943606 41944450 -124705846 - L1Md_F3 LINE L1 -22 6562 5714 5 905 447 54 0 0 chrX 41944448 41944504 -124705792 + L1_Mm LINE L1 4288 4343 -1540 5 905 3985 117 46 0 chrX 41944497 41945173 -124705123 + MusHAL1 LINE L1 1572 2278 -434 5 905 7796 19 0 0 chrX 41945161 41946075 -124704221 - L1_Mm LINE L1 -1374 4509 3596 5 905 3203 21 0 3 chrX 41946063 41946441 -124703855 + L1Md_T LINE L1 5210 5586 -297 5 905 8924 6 0 1 chrX 41946441 41947438 -124702858 + L1Md_T LINE L1 5587 6582 0 5 905 8476 182 13 10 chrX 41947438 41949106 -124701190 + L1_Mur2 LINE L1 3459 5132 -745 5 905 7967 6 0 0 chrX 41949108 41949997 -124700299 - L1Md_A LINE L1 0 6582 5694 5 905 341 67 0 0 chrX 41949996 41950041 -124700255 + L1_Mus2 LINE L1 6163 6207 -359 5 905 378 146 24 35 chrX 41950041 41950126 -124700170 - L1_Mur1 LINE L1 -836 5050 4967 6 905 9346 11 0 3 chrX 41950124 41951192 -124699104 + L1_Mm LINE L1 4678 5742 -141 6 905 5125 155 15 14 chrX 41951187 41952625 -124697671 + Lx LINE L1 5129 6564 -2 6 905 1206 100 0 48 chrX 41952748 41952937 -124697359 - B2_Mm2 SINE B2 -14 181 2 6 905 4802 156 23 0 chrX 41953443 41954266 -124696030 - Lx3C LINE L1 -11 6965 6124 6 905 21 0 0 0 chrX 41955419 41955440 -124694856 + AT_rich Low_complexity Low_complexity 1 21 0 6 905 2796 83 13 15 chrX 41955927 41956385 -124693911 - Lx3C LINE L1 -1037 5972 5519 6 905 1429 131 13 0 chrX 41956385 41956622 -124693674 + Lx3_Mus LINE L1 6770 7009 0 6 905 2672 92 13 0 chrX 41956733 41957113 -124693183 + L1_Mus1 LINE L1 6183 6567 0 6 905 414 0 0 0 chrX 41957511 41957557 -124692739 + (TAAAA)n Simple_repeat Simple_repeat 2 47 0 6 905 219 274 158 0 chrX 41957648 41957743 -124692553 + MIRc SINE MIR 135 244 -24 6 905 203 203 46 15 chrX 41958664 41958729 -124691567 + A-rich Low_complexity Low_complexity 4 70 0 6 905 2344 136 10 12 chrX 41958892 41959301 -124690995 - Lx LINE L1 -6 6648 6241 6 905 1597 272 24 17 chrX 41959370 41959830 -124690466 + Lx9 LINE L1 6905 7367 -277 6 905 31 44 0 0 chrX 41959860 41959905 -124690391 + AT_rich Low_complexity Low_complexity 1 45 0 6 905 213 222 22 0 chrX 41961605 41961650 -124688646 + CT-rich Low_complexity Low_complexity 5 50 0 6 905 211 205 0 0 chrX 41961903 41961942 -124688354 + A-rich Low_complexity Low_complexity 5 43 0 6 905 21 57 0 0 chrX 41962062 41962097 -124688199 + AT_rich Low_complexity Low_complexity 1 35 0 6 905 1428 188 61 0 chrX 41962656 41963033 -124687263 + L1_Mur3 LINE L1 1986 2385 -3495 6 905 749 210 102 64 chrX 41963012 41963277 -124687019 + L1_Mur3 LINE L1 4325 4599 -1281 6 905 4494 161 5 12 chrX 41963272 41964039 -124686257 + Lx2 LINE L1 5948 6709 -288 6 905 1041 161 6 0 chrX 41964377 41964551 -124685745 + Lx2 LINE L1 6704 6878 -119 6 905 4005 26 0 0 chrX 41964547 41965014 -124685282 - L1Md_T LINE L1 -222 5661 5195 6 905 7591 35 0 6 chrX 41965014 41965954 -124684342 + L1Md_T LINE L1 5673 6582 0 6 905 329 174 115 11 chrX 41965954 41966041 -124684255 + Lx2 LINE L1 6864 6959 -38 6 905 2979 196 144 49 chrX 41966045 41966233 -124684063 + L1_Mur3 LINE L1 4627 4806 -1074 6 905 1080 81 0 0 chrX 41966233 41966381 -124683915 + (TTTC)n Simple_repeat Simple_repeat 4 151 0 6 905 2979 196 144 49 chrX 41966381 41967083 -124683213 + L1_Mur3 LINE L1 4807 5601 -279 6 905 636 265 26 0 chrX 41967429 41967580 -124682716 + RMER6D LTR ERVK 559 713 -7 6 905 584 327 137 19 chrX 41967788 41968090 -124682206 - L1M2 LINE L1 -2879 3264 2923 6 905 3518 41 5 2 chrX 41968090 41968527 -124681769 + L1Md_F2 LINE L1 6132 6569 -13 6 905 584 327 137 19 chrX 41968527 41968751 -124681545 - L1M2 LINE L1 -3221 2922 2676 6 905 23 54 0 0 chrX 41969097 41969134 -124681162 + AT_rich Low_complexity Low_complexity 1 37 0 6 905 1039 227 14 0 chrX 41969699 41969919 -124680377 - URR1B DNA MER1_type 0 225 3 6 905 1029 285 42 31 chrX 41969931 41970286 -124680010 - Lx5 LINE L1 -16 7444 7086 6 905 1715 281 107 3 chrX 41970357 41971006 -124679290 - Lx5 LINE L1 -704 6756 5826 6 905 1256 40 17 17 chrX 41971413 41971593 -124678703 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 905 567 155 0 0 chrX 41971595 41971698 -124678598 + CT-rich Low_complexity Low_complexity 4 106 0 6 905 361 274 24 16 chrX 41971912 41972038 -124678258 - Lx7 LINE L1 -2 7694 7568 6 905 1514 209 58 11 chrX 41972091 41972604 -124677692 + RLTR12A LTR ERVK 1 563 -5 6 905 186 208 0 0 chrX 41972605 41972658 -124677638 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 905 21 36 0 0 chrX 41972876 41972904 -124677392 + AT_rich Low_complexity Low_complexity 1 28 0 6 905 219 217 0 0 chrX 41973042 41973088 -124677208 + (CCA)n Simple_repeat Simple_repeat 1 46 0 6 905 25 31 0 0 chrX 41973129 41973161 -124677135 + AT_rich Low_complexity Low_complexity 1 32 0 6 905 192 97 0 0 chrX 41973560 41973591 -124676705 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 905 443 18 18 0 chrX 41973591 41973646 -124676650 + (TA)n Simple_repeat Simple_repeat 1 57 0 6 905 206 213 0 0 chrX 41973839 41973886 -124676410 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 6 905 1624 293 71 24 chrX 41973888 41974562 -124675734 - Lx7 LINE L1 -413 7283 6578 6 905 1282 266 33 65 chrX 41974700 41975252 -124675044 + Lx7 LINE L1 3227 3760 -2120 6 905 363 335 64 20 chrX 41975335 41975539 -124674757 - B3 SINE B2 -3 213 1 6 905 411 21 0 0 chrX 41976234 41976282 -124674014 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 905 273 144 0 118 chrX 41976282 41976369 -124673927 - RMER17C LTR ERVK -141 269 193 6 905 306 0 0 0 chrX 41976377 41976411 -124673885 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 905 994 72 58 0 chrX 41976411 41976541 -124673755 - B1_Mm SINE Alu -8 139 2 6 905 749 316 29 50 chrX 41976655 41977032 -124673264 + ORR1D2 LTR MaLR 1 369 -1 6 905 2509 176 26 0 chrX 41977077 41977531 -124672765 - Lx3B LINE L1 -3 6970 6505 6 905 2503 248 32 20 chrX 41979805 41980695 -124669601 + Lx7 LINE L1 5034 5940 -1756 6 905 2256 184 23 23 chrX 41980728 41981162 -124669134 - L1_Mur2 LINE L1 -165 5712 5279 6 905 1635 322 86 37 chrX 41981142 41981922 -124668374 + Lx7 LINE L1 6502 7319 -377 6 905 256 111 37 0 chrX 41981968 41982022 -124668274 + (TTTTTG)n Simple_repeat Simple_repeat 5 60 0 6 905 21 57 0 0 chrX 41982363 41982398 -124667898 + AT_rich Low_complexity Low_complexity 1 35 0 6 905 329 320 87 11 chrX 41982434 41982801 -124667495 + L1M3 LINE L1 4541 4935 -1205 6 905 530 261 145 29 chrX 41982900 41983176 -124667120 + Lx9 LINE L1 7303 7610 -34 6 905 27456 129 13 10 chrX 41983233 41988267 -124662029 - L1_Mus2 LINE L1 0 6566 1516 6 905 1455 46 0 71 chrX 41988267 41988478 -124661818 - L1Md_F3 LINE L1 -12 6572 6377 6 905 27456 172 12 8 chrX 41988478 41989324 -124660972 - L1_Mus2 LINE L1 -4368 1515 668 6 905 371 280 7 101 chrX 41990167 41990306 -124659990 - ID_B1 SINE B4 0 224 99 6 905 23 33 0 0 chrX 41990357 41990387 -124659909 + AT_rich Low_complexity Low_complexity 1 30 0 6 905 386 295 56 59 chrX 41991709 41992012 -124658284 - RMER17C LTR ERVK -32 378 77 6 905 343 185 23 23 chrX 41992012 41992145 -124658151 + GA-rich Low_complexity Low_complexity 2 134 0 6 905 897 10 0 0 chrX 41992147 41992249 -124658047 + (GGGAA)n Simple_repeat Simple_repeat 3 104 0 6 905 195 42 0 0 chrX 41992366 41992390 -124657906 + (T)n Simple_repeat Simple_repeat 1 24 0 6 905 269 306 7 13 chrX 41992486 41992635 -124657661 - L1_Rod LINE L1 -410 5437 5290 6 905 349 235 163 5 chrX 41992628 41992812 -124657484 - Lx9 LINE L1 -9 7635 7423 6 905 889 203 96 0 chrX 41992810 41993007 -124657289 + Lx9 LINE L1 7115 7330 -314 6 905 335 137 14 0 chrX 41993075 41993148 -124657148 + (CAA)n Simple_repeat Simple_repeat 2 75 0 6 905 8300 42 5 0 chrX 41993319 41994649 -124655647 - L1Md_F3 LINE L1 -17 6567 5226 6 905 458 121 0 0 chrX 41994815 41994881 -124655415 - L1_Mus2 LINE L1 -735 5903 5838 6 905 4906 85 5 5 chrX 41994883 41995548 -124654748 + L1_Mus2 LINE L1 5902 6566 0 6 905 1113 56 0 27 chrX 41995563 41995697 -124654599 + B1_Mm SINE Alu 5 137 -10 6 905 295 41 20 20 chrX 41995697 41995747 -124654549 + (CAAA)n Simple_repeat Simple_repeat 3 52 0 6 905 1113 56 0 27 chrX 41995747 41995759 -124654537 + B1_Mm SINE Alu 138 147 0 6 905 1278 303 43 24 chrX 41997257 41997410 -124652886 + MT2A LTR ERVL 41 189 -344 6 905 222 37 0 0 chrX 41997410 41997437 -124652859 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 905 1278 303 43 24 chrX 41997437 41997699 -124652597 + MT2A LTR ERVL 190 464 -69 6 905 2325 156 33 53 chrX 41997721 41997866 -124652430 + Lx2 LINE L1 5904 6048 -949 6 905 897 10 0 0 chrX 41997866 41997968 -124652328 + (GA)n Simple_repeat Simple_repeat 1 102 0 6 905 2325 156 33 53 chrX 41997968 41998309 -124651987 + Lx2 LINE L1 6049 6380 -617 6 905 2984 142 114 8 chrX 41998307 41998840 -124651456 - Lx2 LINE L1 -248 6749 6160 6 905 7180 87 6 7 chrX 41998843 42000000 -124650296 - L1Md_F2 LINE L1 0 6582 5429 6 905 28999 84 18 8 chrX 42000000 42005008 -124645288 - L1Md_F LINE L1 -455 5428 374 1 905 6384 176 16 7 chrX 42004992 42006542 -124643754 - Lx2 LINE L1 -815 6182 4615 2 905 25 0 0 0 chrX 42006877 42006902 -124643394 + AT_rich Low_complexity Low_complexity 1 25 0 3 905 28 0 0 0 chrX 42007071 42007099 -124643197 + AT_rich Low_complexity Low_complexity 1 28 0 4 905 2295 131 11 13 chrX 42007118 42007496 -124642800 + Lx LINE L1 6274 6650 -4 5 905 2369 78 28 0 chrX 42007592 42007913 -124642383 - L1_Mus1 LINE L1 0 6567 6238 6 905 4947 97 1 55 chrX 42007914 42008622 -124641674 - L1_Mus1 LINE L1 -604 5963 5259 6 905 586 67 38 0 chrX 42008622 42008727 -124641569 - L1Md_F2 LINE L1 -1 6581 6473 7 905 4947 136 1 110 chrX 42008727 42009105 -124641191 - L1_Mus1 LINE L1 -625 5258 4987 6 905 38811 35 1 0 chrX 42009107 42014517 -124635779 - L1Md_T LINE L1 0 6582 1170 8 905 4456 151 30 35 chrX 42014523 42015430 -124634866 - L1Md_T LINE L1 -5411 1205 304 8 905 1703 131 0 0 chrX 42015431 42015691 -124634605 - L1_Mus1 LINE L1 -885 4998 4739 6 905 438 62 15 30 chrX 42015684 42015750 -124634546 + L1_Mur2 LINE L1 4685 4749 -1128 9 905 1184 267 106 0 chrX 42015772 42016083 -124634213 + ORR1C2 LTR MaLR 13 356 -28 1 905 189 94 0 0 chrX 42016084 42016116 -124634180 + (T)n Simple_repeat Simple_repeat 1 32 0 1 905 21 0 0 0 chrX 42016178 42016199 -124634097 + AT_rich Low_complexity Low_complexity 1 21 0 1 905 370 323 71 15 chrX 42016200 42016520 -124633776 - L1M4 LINE L1 -4938 1966 1582 1 905 371 75 12 48 chrX 42017064 42017148 -124633148 + (TTTTG)n Simple_repeat Simple_repeat 2 82 0 1 905 23 0 0 0 chrX 42017266 42017289 -124633007 + AT_rich Low_complexity Low_complexity 1 23 0 1 905 1802 205 31 18 chrX 42017779 42018166 -124632130 + ORR1B1 LTR MaLR 3 394 0 1 905 4197 292 53 36 chrX 42018432 42018582 -124631714 - Lx7 LINE L1 -257 7439 7299 1 905 180 0 0 0 chrX 42018582 42018602 -124631694 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 905 4197 292 53 36 chrX 42018602 42019475 -124630821 - Lx7 LINE L1 -398 7298 6426 1 905 1334 230 45 32 chrX 42019475 42019852 -124630444 + ORR1C2 LTR MaLR 1 382 -2 1 905 4197 292 53 36 chrX 42019852 42020413 -124629883 - Lx7 LINE L1 -1271 6425 5828 1 905 302 282 49 0 chrX 42020476 42020618 -124629678 + L1M4 LINE L1 2461 2609 -3537 2 905 495 0 0 0 chrX 42020632 42020687 -124629609 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 905 358 320 56 73 chrX 42020698 42020985 -124629311 + L1M4 LINE L1 2665 2946 -3200 2 905 1241 287 74 14 chrX 42021135 42021502 -124628794 - MTD LTR MaLR -2 417 29 2 905 3773 102 16 4 chrX 42021822 42022372 -124627924 + L1_Mus2 LINE L1 6010 6566 0 2 905 4897 46 7 0 chrX 42022491 42023096 -124627200 + L1Md_F3 LINE L1 5962 6570 -14 2 905 2193 283 56 39 chrX 42023607 42024357 -124625939 + RMER1C Other Other 561 1323 -19 2 905 198 0 0 0 chrX 42024470 42024492 -124625804 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 905 561 266 15 23 chrX 42024521 42024652 -124625644 + B1_Mur2 SINE Alu 6 135 -14 2 905 447 19 0 0 chrX 42024652 42024704 -124625592 + (GAAAA)n Simple_repeat Simple_repeat 3 54 0 2 905 359 324 45 28 chrX 42025151 42025437 -124624859 + L1M4 LINE L1 4662 4952 -1194 2 905 22 0 0 0 chrX 42025544 42025566 -124624730 + AT_rich Low_complexity Low_complexity 1 22 0 2 905 261 0 0 0 chrX 42025566 42025595 -124624701 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 905 240 35 0 0 chrX 42025974 42026003 -124624293 + (TAA)n Simple_repeat Simple_repeat 3 31 0 3 905 225 311 36 29 chrX 42026247 42026386 -124623910 + L1M4 LINE L1 5568 5707 -472 2 905 25 31 0 0 chrX 42026386 42026418 -124623878 + AT_rich Low_complexity Low_complexity 1 32 0 3 905 237 331 22 37 chrX 42026503 42026638 -124623658 + L1MB5 LINE L1 5850 5982 -192 3 905 1200 230 120 0 chrX 42026882 42027182 -124623114 + Lx3C LINE L1 6635 6970 -6 3 905 194 30 91 0 chrX 42027569 42027602 -124622694 + (CAAAAA)n Simple_repeat Simple_repeat 5 40 0 3 905 30 97 0 0 chrX 42027679 42027772 -124622524 + AT_rich Low_complexity Low_complexity 1 93 0 3 905 509 264 15 25 chrX 42027855 42028057 -124622239 + L1_Rod LINE L1 5038 5237 -610 3 905 4127 84 2 2 chrX 42028078 42028629 -124621667 + L1_Mus2 LINE L1 6016 6566 0 3 905 2925 54 13 8 chrX 42028646 42029040 -124621256 - ORR1A0-int LTR MaLR -1396 396 1 3 905 3110 12 0 0 chrX 42029040 42029386 -124620910 - ORR1A0 LTR MaLR 0 346 1 3 905 646 324 40 8 chrX 42029513 42029762 -124620534 - Lx9 LINE L1 -709 6935 6679 4 905 809 296 141 40 chrX 42029769 42030244 -124620052 + Lx9 LINE L1 6950 7472 -172 4 905 27 81 0 0 chrX 42030370 42030432 -124619864 + AT_rich Low_complexity Low_complexity 1 62 0 4 905 2082 75 21 11 chrX 42030482 42030767 -124619529 - L1_Mus1 LINE L1 0 6567 6280 4 905 21 0 0 0 chrX 42031270 42031291 -124619005 + AT_rich Low_complexity Low_complexity 1 21 0 4 905 537 16 0 0 chrX 42031777 42031839 -124618457 + (TA)n Simple_repeat Simple_repeat 1 62 0 4 905 4569 57 0 3 chrX 42031845 42032422 -124617874 - L1Md_F2 LINE L1 -77 6505 5931 4 905 22 0 0 0 chrX 42032422 42032444 -124617852 + AT_rich Low_complexity Low_complexity 1 22 0 4 905 1346 324 57 13 chrX 42032460 42033007 -124617289 - Lx8 LINE L1 -17 7456 6886 4 905 14410 179 34 8 chrX 42033019 42035331 -124614965 + Lx3B LINE L1 2885 5260 -617 4 905 1305 38 0 0 chrX 42035331 42035490 -124614806 + (GA)n Simple_repeat Simple_repeat 2 160 0 4 905 14410 198 66 8 chrX 42035490 42036544 -124613752 + Lx3B LINE L1 5261 6404 -569 4 905 709 278 332 46 chrX 42037569 42038153 -124612143 + RMER1C Other Other 565 1315 -27 5 905 239 299 15 0 chrX 42038558 42038625 -124611671 + LTR83 LTR ERVL 54 121 -659 5 905 249 378 33 0 chrX 42038714 42038804 -124611492 + B1F1 SINE Alu 10 102 -47 5 905 684 36 0 0 chrX 42039012 42039095 -124611201 + (TTC)n Simple_repeat Simple_repeat 2 84 0 5 905 429 296 0 7 chrX 42039342 42039488 -124610808 + B1_Mus2 SINE Alu 1 145 -2 5 905 398 69 17 0 chrX 42039675 42039733 -124610563 + (TTA)n Simple_repeat Simple_repeat 1 59 0 5 905 1693 132 111 7 chrX 42039741 42040039 -124610257 - Lx3B LINE L1 0 6973 6645 5 905 5339 129 1 11 chrX 42040040 42040860 -124609436 + Lx3B LINE L1 5830 6641 -332 5 905 233 283 0 0 chrX 42041020 42041066 -124609230 + 4.5SRNA scRNA scRNA 42 87 -7 5 905 224 367 0 22 chrX 42041152 42041244 -124609052 - PB1D10 SINE Alu -11 106 17 5 905 3164 41 51 0 chrX 42041283 42041674 -124608622 + IAPLTR2a LTR ERVK 1 411 0 5 905 288 264 84 29 chrX 42041681 42041919 -124608377 - L1M3 LINE L1 -1464 4676 4426 6 905 52 0 0 0 chrX 42041956 42042008 -124608288 + AT_rich Low_complexity Low_complexity 1 52 0 6 905 248 286 160 9 chrX 42042238 42042344 -124607952 - Lx8 LINE L1 -1065 6408 6287 6 905 297 224 45 45 chrX 42042500 42042589 -124607707 - Lx7 LINE L1 -1513 6183 6095 6 905 405 0 0 0 chrX 42042808 42042853 -124607443 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 905 663 272 45 60 chrX 42043358 42043691 -124606605 + RLTR15 LTR ERVK 1 328 -31 6 905 24 32 0 0 chrX 42044575 42044606 -124605690 + AT_rich Low_complexity Low_complexity 1 31 0 6 905 2326 203 44 60 chrX 42044972 42045673 -124604623 + RMER6C LTR ERVK 1 690 0 6 905 36 23 0 0 chrX 42046138 42046181 -124604115 + AT_rich Low_complexity Low_complexity 1 43 0 6 905 2243 99 10 0 chrX 42046359 42046673 -124603623 - L1_Mus2 LINE L1 -1 6565 6249 6 905 3023 126 2 2 chrX 42047666 42048111 -124602185 - Lx3_Mus LINE L1 -366 6643 6199 7 905 1995 138 22 3 chrX 42048111 42048430 -124601866 + Lx3A LINE L1 6656 6980 -1 7 905 270 0 0 0 chrX 42048487 42048517 -124601779 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 7 905 701 371 30 11 chrX 42048876 42049206 -124601090 + ORR1D2 LTR MaLR 3 359 0 7 905 23 54 0 0 chrX 42050491 42050528 -124599768 + AT_rich Low_complexity Low_complexity 1 37 0 7 905 2683 77 0 11 chrX 42050815 42051183 -124599113 + L1Md_F2 LINE L1 6207 6570 -12 7 905 25 51 0 0 chrX 42051468 42051507 -124598789 + AT_rich Low_complexity Low_complexity 1 39 0 7 905 398 370 43 0 chrX 42051695 42051833 -124598463 + RSINE1 SINE B4 15 158 -7 7 905 207 69 0 0 chrX 42051850 42051879 -124598417 + (CATA)n Simple_repeat Simple_repeat 2 30 0 7 905 1031 76 0 0 chrX 42052178 42052323 -124597973 + L1_Mus3 LINE L1 5937 6081 -557 7 905 236 309 0 0 chrX 42052581 42052649 -124597647 - MLT1A0 LTR MaLR 0 365 298 8 905 393 95 0 0 chrX 42052653 42052716 -124597580 + (TCTCTG)n Simple_repeat Simple_repeat 2 64 0 8 905 3039 247 51 78 chrX 42052893 42053959 -124596337 + Lx6 LINE L1 4609 5655 -222 8 905 2274 169 22 2 chrX 42053959 42054363 -124595933 + Lx LINE L1 6231 6642 -12 8 905 3039 247 51 78 chrX 42054363 42054467 -124595829 + Lx6 LINE L1 5656 5748 -129 8 905 3612 114 69 0 chrX 42054457 42055009 -124595287 - Lx3C LINE L1 -212 6764 6175 8 905 974 175 92 5 chrX 42055003 42055210 -124595086 + Lx3C LINE L1 6750 6974 -2 8 905 1614 276 49 8 chrX 42055267 42055775 -124594521 + Lx6 LINE L1 5745 6273 -1187 8 905 1602 290 53 23 chrX 42055774 42056410 -124593886 + Lx6 LINE L1 6457 7460 0 8 905 6089 249 55 58 chrX 42056754 42058960 -124591336 - Lx4B LINE L1 0 7058 4851 8 905 480 48 0 0 chrX 42058960 42059023 -124591273 + (TG)n Simple_repeat Simple_repeat 2 64 0 8 905 6089 206 64 10 chrX 42059023 42059534 -124590762 - Lx4B LINE L1 -1027 4850 4323 8 905 627 163 32 0 chrX 42059537 42059660 -124590636 + L1_Mur2 LINE L1 2086 2212 -3665 8 905 1178 147 39 18 chrX 42059685 42059914 -124590382 + Lx4B LINE L1 6501 6734 -324 8 905 1148 242 23 13 chrX 42059916 42060489 -124589807 - Lx4B LINE L1 -4412 1465 892 8 905 252 0 0 0 chrX 42060552 42060580 -124589716 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 8 905 3871 99 2 0 chrX 42060833 42061377 -124588919 - L1_Mus2 LINE L1 -283 6283 5739 9 905 29021 114 12 2 chrX 42061388 42064775 -124585521 - L1_Mus1 LINE L1 0 6567 3132 9 905 192 77 0 0 chrX 42064775 42064801 -124585495 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 9 905 29021 123 19 8 chrX 42064801 42066915 -124583381 - L1_Mus1 LINE L1 -2752 3131 1071 9 905 1162 65 7 7 chrX 42066923 42067077 -124583219 - L1Md_T LINE L1 -39 6543 6390 9 905 4228 40 87 0 chrX 42067301 42068049 -124582247 - L1Md_T LINE L1 -206 6376 5564 9 905 21 36 0 0 chrX 42068323 42068351 -124581945 + AT_rich Low_complexity Low_complexity 1 28 0 9 905 896 165 11 0 chrX 42068412 42068588 -124581708 + (TCTCTG)n Simple_repeat Simple_repeat 3 180 0 9 905 22 0 0 0 chrX 42068765 42068787 -124581509 + AT_rich Low_complexity Low_complexity 1 22 0 9 905 21 0 0 0 chrX 42069130 42069151 -124581145 + AT_rich Low_complexity Low_complexity 1 21 0 9 905 262 208 0 0 chrX 42069507 42069560 -124580736 - Lx5 LINE L1 -646 6404 6352 9 905 26 74 0 0 chrX 42069913 42069967 -124580329 + AT_rich Low_complexity Low_complexity 1 54 0 9 905 358 307 17 9 chrX 42070992 42071107 -124579189 - MTE2b LTR MaLR -8 371 256 1 905 1550 321 73 32 chrX 42071201 42071970 -124578326 - Lx8 LINE L1 -315 7158 6359 1 905 662 264 48 64 chrX 42071976 42072227 -124578069 - MTC-int LTR MaLR -2 1256 1010 1 905 1240 285 67 26 chrX 42072236 42072318 -124577978 - Lx6 LINE L1 -13 7447 7359 1 905 3487 18 2 0 chrX 42072318 42072713 -124577583 - MTA_Mm LTR MaLR 0 396 1 1 905 8941 38 6 2 chrX 42072713 42073806 -124576490 - MTA_Mm-int LTR MaLR 0 1098 1 1 113 3400 28 5 0 chrX 42073806 42074200 -124576096 - MTA_Mm LTR MaLR 0 396 1 1 906 1240 285 67 26 chrX 42074200 42074504 -124575792 - Lx6 LINE L1 -102 7358 7045 1 906 589 265 46 51 chrX 42074511 42074706 -124575590 - MTC-int LTR MaLR -250 1008 815 1 906 7029 166 8 2 chrX 42074707 42075990 -124574306 - L1_Mur1 LINE L1 -2036 3850 2561 1 906 1841 318 69 59 chrX 42075990 42076285 -124574011 - MTC-int LTR MaLR -429 829 530 1 906 2094 152 38 146 chrX 42076285 42076785 -124573511 - RLTR41 LTR ERV1 0 446 1 1 906 1841 260 19 23 chrX 42076785 42077193 -124573103 - MTC-int LTR MaLR -634 624 215 1 906 599 264 133 17 chrX 42077180 42077361 -124572935 - MTD LTR MaLR -19 400 199 1 906 333 155 0 0 chrX 42077361 42077419 -124572877 + CT-rich Low_complexity Low_complexity 2 59 0 1 906 449 325 0 0 chrX 42077425 42077545 -124572751 - MTD LTR MaLR -232 187 68 1 906 4446 76 66 0 chrX 42077571 42078175 -124572121 + L1_Mus1 LINE L1 5924 6567 0 1 906 27 29 0 0 chrX 42078215 42078249 -124572047 + AT_rich Low_complexity Low_complexity 1 34 0 1 906 296 254 0 0 chrX 42078255 42078318 -124571978 - MTD LTR MaLR -351 70 8 1 906 248 222 95 0 chrX 42078364 42078427 -124571869 + MTC-int LTR MaLR 373 441 -817 1 906 1038 350 35 24 chrX 42079099 42079635 -124570661 - Lx8 LINE L1 -7 7466 6925 1 906 245 150 0 0 chrX 42079636 42079676 -124570620 - ORR1A4-int LTR MaLR -962 1001 962 1 906 8422 280 22 27 chrX 42079821 42082733 -124567563 + IAP-d-int LTR ERVK 3187 6083 -459 1 906 1531 216 17 22 chrX 42082728 42083083 -124567213 + IAP-d-int LTR ERVK 6190 6542 0 1 906 748 272 71 48 chrX 42083083 42083434 -124566862 + RLTR10D LTR ERVK 1 359 0 1 906 2418 225 93 29 chrX 42083434 42084422 -124565874 - ORR1A4-int LTR MaLR -996 967 1 1 906 1958 150 3 12 chrX 42084426 42084750 -124565546 - ORR1A4 LTR MaLR -8 321 1 1 906 329 359 0 0 chrX 42084754 42084857 -124565439 - Lx8 LINE L1 -1086 6387 6285 1 906 566 298 82 19 chrX 42085128 42085494 -124564802 - L1MA4 LINE L1 -421 5879 5491 1 906 37553 18 1 7 chrX 42085596 42090968 -124559328 + L1Md_A LINE L1 249 5586 -297 1 906 8698 19 0 0 chrX 42090968 42091964 -124558332 + L1Md_A LINE L1 5587 6582 0 1 906 283 292 26 0 chrX 42091970 42092083 -124558213 - L1_Mur3 LINE L1 -463 5417 5302 1 906 428 247 96 19 chrX 42092079 42092236 -124558060 - L1_Rod LINE L1 -624 5223 5055 1 906 384 103 0 0 chrX 42092316 42092374 -124557922 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 906 1196 291 32 19 chrX 42092438 42092816 -124557480 - Lx6 LINE L1 -2 7458 7076 1 906 642 329 17 9 chrX 42092906 42093139 -124557157 + Lx8 LINE L1 7108 7342 -131 1 906 1651 250 90 3 chrX 42093145 42093534 -124556762 + RMER19B LTR ERVK 468 890 -12 1 906 1178 234 70 0 chrX 42095074 42095347 -124554949 + Lx9 LINE L1 6942 7233 -411 1 906 6917 100 13 7 chrX 42095438 42096527 -124553769 + L1_Mus2 LINE L1 5475 6566 0 1 906 290 176 45 25 chrX 42096750 42096839 -124553457 - Lx7 LINE L1 0 7696 7618 1 906 254 233 88 88 chrX 42096842 42096955 -124553341 + MT2B LTR ERVL 166 278 -323 1 906 788 89 24 24 chrX 42096859 42096985 -124553311 + B1_Mus2 SINE Alu 22 147 0 1 906 390 157 0 0 chrX 42096987 42097089 -124553207 + A-rich Low_complexity Low_complexity 1 102 0 1 906 24 0 0 0 chrX 42097597 42097621 -124552675 + AT_rich Low_complexity Low_complexity 1 24 0 1 906 21 36 0 0 chrX 42098090 42098118 -124552178 + AT_rich Low_complexity Low_complexity 1 28 0 1 906 567 285 199 3 chrX 42098199 42098481 -124551815 + MT2B LTR ERVL 1 337 -264 1 906 380 272 6 34 chrX 42098481 42098656 -124551640 + L1_Mur3 LINE L1 3361 3530 -2350 1 906 22 70 0 0 chrX 42100276 42100319 -124549977 + AT_rich Low_complexity Low_complexity 1 43 0 1 906 324 368 36 62 chrX 42100947 42101206 -124549090 - LTR16B1 LTR ERVL -18 445 142 1 906 249 282 141 31 chrX 42102007 42102135 -124548161 - MLT1A LTR MaLR 0 374 233 1 906 333 341 16 24 chrX 42102210 42102336 -124547960 - MLT1A LTR MaLR -249 125 1 1 906 963 345 85 96 chrX 42102461 42103167 -124547129 - MER21B LTR ERV1 -151 712 15 1 906 428 97 153 0 chrX 42103405 42103477 -124546819 + Lx6 LINE L1 6757 6839 -621 1 906 360 0 0 0 chrX 42104045 42104085 -124546211 + (TTA)n Simple_repeat Simple_repeat 1 40 0 1 906 1205 231 57 0 chrX 42104086 42104350 -124545946 - Lx2B LINE L1 -24 6976 6698 1 906 1997 209 34 5 chrX 42104463 42104910 -124545386 - Lx4B LINE L1 -1 7057 6598 1 906 234 329 61 0 chrX 42105119 42105201 -124545095 + MLT2B2 LTR ERVL 1 87 -428 1 906 1837 354 93 35 chrX 42105639 42107252 -124543044 - MER21-int LTR ERV1 -541 3650 1945 1 906 478 209 0 0 chrX 42108213 42108318 -124541978 + MER2 DNA MER2_type 107 211 -134 1 906 3750 173 69 7 chrX 42108559 42109269 -124541027 - Lx2 LINE L1 0 6997 6244 1 906 3253 133 42 2 chrX 42109269 42109797 -124540499 + Lx2 LINE L1 5606 6154 -843 1 906 265 260 10 40 chrX 42109922 42110022 -124540274 - Lx8 LINE L1 -13 7460 7364 1 906 482 323 7 15 chrX 42110038 42110173 -124540123 + Lx8 LINE L1 7195 7328 -145 1 906 352 48 15 45 chrX 42110224 42110290 -124540006 - L1Md_F2 LINE L1 0 6582 6519 1 906 21 82 0 0 chrX 42111017 42111066 -124539230 + AT_rich Low_complexity Low_complexity 1 49 0 1 906 419 331 14 0 chrX 42111159 42111307 -124538989 - Lx8 LINE L1 -134 7339 7190 1 906 231 446 23 27 chrX 42111687 42111906 -124538390 - MER21B LTR ERV1 -396 467 250 1 906 21 71 0 0 chrX 42112014 42112056 -124538240 + AT_rich Low_complexity Low_complexity 1 42 0 1 906 323 224 15 0 chrX 42112072 42112139 -124538157 + B4A SINE B4 3 70 -222 1 906 284 290 67 39 chrX 42112260 42112364 -124537932 + B3 SINE B2 5 111 -105 1 906 195 100 0 0 chrX 42112505 42112535 -124537761 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1 906 1429 149 4 8 chrX 42112535 42112775 -124537521 - Lx3A LINE L1 -11 6970 6732 1 906 371 172 0 0 chrX 42112825 42112889 -124537407 + Lx3A LINE L1 6679 6742 -239 1 906 456 19 0 0 chrX 42112905 42112958 -124537338 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 906 244 120 40 0 chrX 42112958 42113008 -124537288 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 906 295 303 0 0 chrX 42114589 42114655 -124535641 - B4A SINE B4 -224 68 3 1 906 346 267 47 9 chrX 42114864 42114970 -124535326 + L1M1 LINE L1 5684 5793 -510 1 906 1183 204 101 40 chrX 42116482 42116779 -124533517 - RLTR46 LTR ERVK -5 315 1 1 906 27 81 0 0 chrX 42116886 42116948 -124533348 + AT_rich Low_complexity Low_complexity 1 62 0 1 906 2936 182 120 20 chrX 42117453 42118103 -124532193 + RMER6D LTR ERVK 2 716 -4 1 906 308 272 126 30 chrX 42118370 42118537 -124531759 - Lx9 LINE L1 -551 7093 6911 1 906 242 341 60 8 chrX 42118556 42118689 -124531607 + Lx9 LINE L1 7225 7364 -280 1 906 252 86 0 0 chrX 42118838 42118873 -124531423 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 906 330 250 17 51 chrX 42119481 42119599 -124530697 - Lx5 LINE L1 -5 7045 6932 1 906 968 188 136 12 chrX 42119740 42119982 -124530314 - Lx6 LINE L1 -2178 3699 3428 1 906 7925 203 40 44 chrX 42119979 42120570 -124529726 + Lx6 LINE L1 3697 4279 -1601 1 906 333 68 0 0 chrX 42120570 42120614 -124529682 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1 906 7925 203 40 44 chrX 42120614 42121388 -124528908 + Lx6 LINE L1 4280 5077 -803 1 906 971 118 7 0 chrX 42121388 42121524 -124528772 + B1_Mus1 SINE Alu 2 138 -10 1 906 216 0 0 0 chrX 42121524 42121548 -124528748 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 906 7925 203 40 44 chrX 42121548 42121775 -124528521 + Lx6 LINE L1 5078 5314 -566 1 906 1953 57 53 4 chrX 42121775 42122039 -124528257 + L1_Mus1 LINE L1 6289 6565 -2 1 906 7925 250 71 54 chrX 42122039 42123725 -124526571 + Lx6 LINE L1 5315 7263 -197 1 906 343 38 38 0 chrX 42123725 42123778 -124526518 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 1 906 975 95 0 55 chrX 42123778 42123923 -124526373 - B1_Mus1 SINE Alu -9 139 3 1 906 2430 286 78 42 chrX 42123923 42124119 -124526177 + Lx6 LINE L1 7264 7429 -31 1 906 443 315 135 34 chrX 42124278 42124574 -124525722 + Lx8 LINE L1 7116 7441 -32 1 906 4467 159 45 40 chrX 42125155 42126054 -124524242 - RMER17B LTR ERVK -55 903 1 1 906 186 43 0 0 chrX 42126368 42126391 -124523905 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 906 289 318 135 28 chrX 42126624 42126802 -124523494 - Lx9 LINE L1 -195 7449 7253 1 906 436 353 26 45 chrX 42126843 42127107 -124523189 - Lx8 LINE L1 -525 6948 6690 1 906 851 107 8 0 chrX 42127922 42128053 -124522243 + L1_Mus2 LINE L1 6435 6566 0 1 906 666 255 134 4 chrX 42128109 42128228 -124522068 + ORR1C2-int LTR MaLR 1157 1262 -108 1 906 2934 144 18 12 chrX 42128228 42128727 -124521569 - Lx2 LINE L1 0 6997 6496 1 906 666 245 138 0 chrX 42128727 42128816 -124521480 + ORR1C2-int LTR MaLR 1263 1369 -1 1 906 923 202 80 247 chrX 42128816 42129277 -124521019 + ORR1C2 LTR MaLR 1 384 0 1 906 281 324 0 0 chrX 42129281 42129349 -124520947 - B4A SINE B4 -221 71 4 1 906 22 35 0 0 chrX 42129638 42129667 -124520629 + AT_rich Low_complexity Low_complexity 1 29 0 1 906 24 67 0 0 chrX 42129786 42129831 -124520465 + AT_rich Low_complexity Low_complexity 1 45 0 1 906 713 316 85 45 chrX 42129870 42130446 -124519850 + L1MB2 LINE L1 5459 6060 -111 1 906 235 0 57 0 chrX 42130446 42130481 -124519815 + (TTTTG)n Simple_repeat Simple_repeat 1 37 0 1 906 713 316 85 45 chrX 42130481 42130527 -124519769 + L1MB2 LINE L1 6061 6106 -65 1 906 340 313 89 17 chrX 42130824 42130941 -124519355 + B1F SINE Alu 1 124 -23 1 906 25 90 0 0 chrX 42131003 42131070 -124519226 + AT_rich Low_complexity Low_complexity 1 67 0 1 906 28 48 0 0 chrX 42132177 42132219 -124518077 + AT_rich Low_complexity Low_complexity 1 42 0 1 906 375 341 14 87 chrX 42132618 42132756 -124517540 + RSINE1 SINE B4 25 152 -13 1 906 381 93 0 0 chrX 42132790 42132844 -124517452 + (TAA)n Simple_repeat Simple_repeat 3 56 0 1 906 468 0 0 0 chrX 42132979 42133031 -124517265 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 1 906 5787 66 3 1 chrX 42133510 42134257 -124516039 + L1Md_F2 LINE L1 4839 5586 -297 1 906 8029 54 0 4 chrX 42134257 42135257 -124515039 + L1Md_F2 LINE L1 5587 6582 0 1 906 346 353 34 8 chrX 42135349 42135482 -124514814 + B1F SINE Alu 1 136 -13 1 906 266 311 0 13 chrX 42135507 42135582 -124514714 + ID2 SINE ID 6 79 -4 1 906 340 113 19 0 chrX 42136519 42136572 -124513724 - HAL1-3A_ME LINE L1 -828 2030 1977 1 906 421 152 40 23 chrX 42136572 42136747 -124513549 + (TG)n Simple_repeat Simple_repeat 2 179 0 1 906 195 146 0 0 chrX 42136764 42136805 -124513491 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 906 361 42 0 20 chrX 42136861 42136910 -124513386 - HAL1-3A_ME LINE L1 -835 2023 1976 1 906 244 156 33 22 chrX 42136910 42137002 -124513294 + (TG)n Simple_repeat Simple_repeat 1 93 0 1 906 302 143 0 20 chrX 42137007 42137057 -124513239 - HAL1-3A_ME LINE L1 -838 2020 1972 1 906 523 165 22 22 chrX 42137067 42137247 -124513049 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 906 504 164 16 33 chrX 42137284 42137467 -124512829 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 906 711 124 31 13 chrX 42137487 42137716 -124512580 + (TG)n Simple_repeat Simple_repeat 1 233 0 1 906 342 315 133 28 chrX 42137780 42138028 -124512268 - B4A SINE B4 -16 276 3 2 906 613 296 100 47 chrX 42138246 42138370 -124511926 + Lx8 LINE L1 7154 7268 -205 2 906 616 205 220 5 chrX 42138370 42138556 -124511740 - URR1A DNA MER1_type 0 226 1 2 906 613 296 100 47 chrX 42138556 42138732 -124511564 + Lx8 LINE L1 7269 7470 -3 2 906 23 68 0 0 chrX 42138784 42138828 -124511468 + AT_rich Low_complexity Low_complexity 1 44 0 2 906 1313 88 16 11 chrX 42138939 42139122 -124511174 + B2_Mm1a SINE B2 2 185 -8 2 906 24 53 0 0 chrX 42139298 42139336 -124510960 + AT_rich Low_complexity Low_complexity 1 38 0 2 906 817 161 0 18 chrX 42139478 42139643 -124510653 - Lx2 LINE L1 -1 6996 6835 2 906 201 275 0 38 chrX 42143958 42144011 -124506285 - MER5A DNA MER1_type -22 167 117 2 906 359 309 209 15 chrX 42146654 42147252 -124503044 + L1MC LINE L1 2690 3412 -2734 2 906 325 324 103 53 chrX 42147499 42147799 -124502497 - MLT1B LTR MaLR -9 381 67 2 906 189 94 0 0 chrX 42147807 42147839 -124502457 + (TC)n Simple_repeat Simple_repeat 1 32 0 2 906 651 81 0 0 chrX 42147839 42147938 -124502358 + (TG)n Simple_repeat Simple_repeat 2 100 0 2 906 821 296 62 27 chrX 42147940 42148197 -124502099 - B4 SINE B4 -23 269 4 2 906 496 302 104 13 chrX 42148300 42148974 -124501322 + L1MC LINE L1 3732 4472 -1674 2 906 306 354 6 12 chrX 42148975 42149135 -124501161 + L1MD LINE L1 4524 4682 -1464 2 906 265 342 0 25 chrX 42149172 42149253 -124501043 - ID4 SINE ID -4 79 1 2 906 537 314 63 0 chrX 42149359 42149550 -124500746 + B3 SINE B2 2 204 -12 2 906 332 59 20 0 chrX 42150159 42150210 -124500086 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 906 690 13 0 0 chrX 42150308 42150387 -124499909 + (TC)n Simple_repeat Simple_repeat 1 79 0 2 906 4322 108 51 0 chrX 42150392 42151040 -124499256 - Lx LINE L1 -14 6640 5960 2 906 3244 98 34 11 chrX 42151070 42151545 -124498751 - Lx3_Mus LINE L1 -5 7004 6519 2 906 310 26 0 0 chrX 42151545 42151584 -124498712 - Lx LINE L1 -685 5969 5931 2 906 824 286 45 122 chrX 42151676 42151987 -124498309 - B4A SINE B4 0 292 6 2 906 22 0 0 0 chrX 42152415 42152437 -124497859 + AT_rich Low_complexity Low_complexity 1 22 0 2 906 1868 76 47 7 chrX 42152438 42152717 -124497579 + L1_Mus2 LINE L1 6275 6564 -2 2 906 354 327 40 0 chrX 42152731 42152881 -124497415 - Charlie7 DNA MER1_type -366 2246 2091 2 906 322 268 0 0 chrX 42152895 42152977 -124497319 - Lx9 LINE L1 -373 7271 7190 2 906 22 0 0 0 chrX 42153812 42153834 -124496462 + AT_rich Low_complexity Low_complexity 1 22 0 2 906 456 330 13 64 chrX 42153916 42154149 -124496147 - ID_B1 SINE B4 -1 223 3 2 906 3120 191 149 25 chrX 42154419 42155178 -124495118 + Lx5 LINE L1 6118 6970 -80 2 906 984 92 50 0 chrX 42155226 42155367 -124494929 + B1_Mus1 SINE Alu 1 148 0 2 906 2156 163 155 23 chrX 42155433 42155904 -124494392 + L1_Mur2 LINE L1 5090 5622 -255 2 906 269 390 0 0 chrX 42156177 42156282 -124494014 - L1_Rod LINE L1 -6977 195 91 2 906 516 308 26 88 chrX 42157404 42157632 -124492664 + B3 SINE B2 1 214 -2 2 906 1688 101 27 64 chrX 42157754 42158082 -124492214 + RLTRETN_Mm LTR ERVK 7 322 0 2 906 230 323 171 67 chrX 42158293 42158532 -124491764 - Lx8 LINE L1 -250 7223 6960 2 906 2192 326 60 17 chrX 42159122 42160297 -124489999 - Lx6 LINE L1 -28 7432 5953 2 906 189 107 0 0 chrX 42160393 42160421 -124489875 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 2 906 241 307 53 16 chrX 42160494 42160739 -124489557 + L1M4 LINE L1 3243 3496 -2650 2 906 290 313 83 29 chrX 42160830 42161034 -124489262 + RLTR42-int LTR ERVK 1148 1362 -4160 2 906 250 132 0 0 chrX 42161593 42161631 -124488665 - Lx2B LINE L1 -423 6577 6540 2 906 437 143 57 0 chrX 42161643 42161748 -124488548 + Lx2A1 LINE L1 6896 7006 -2 2 906 3762 67 21 15 chrX 42161882 42162377 -124487919 + L1_Mus1 LINE L1 6037 6539 -28 2 906 4072 86 9 16 chrX 42162377 42162945 -124487351 - LTRIS2 LTR ERV1 0 564 1 2 906 3762 67 21 15 chrX 42162945 42162967 -124487329 + L1_Mus1 LINE L1 6540 6557 -10 2 906 207 0 0 0 chrX 42164365 42164388 -124485908 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2 906 1042 121 0 92 chrX 42164442 42164660 -124485636 - L1_Mus4 LINE L1 0 6636 6439 2 906 723 246 115 5 chrX 42168363 42168555 -124481741 - B3 SINE B2 0 216 4 2 906 4766 84 26 2 chrX 42168629 42169274 -124481022 + L1Md_F2 LINE L1 5909 6569 -13 2 906 28 29 0 0 chrX 42169387 42169422 -124480874 + AT_rich Low_complexity Low_complexity 1 35 0 2 906 377 329 57 38 chrX 42169492 42169757 -124480539 + L1MC4 LINE L1 6792 7061 -981 2 906 806 343 34 50 chrX 42169769 42170152 -124480144 - MTEa LTR MaLR -2 377 1 2 906 608 350 78 30 chrX 42170188 42170716 -124479580 + L1MC4 LINE L1 7070 7622 -420 2 906 3327 71 0 0 chrX 42170727 42171152 -124479144 - L1Md_F2 LINE L1 -437 6145 5721 2 906 3695 80 18 10 chrX 42171152 42171660 -124478636 + L1Md_F2 LINE L1 6071 6582 0 2 906 364 358 28 34 chrX 42171740 42171919 -124478377 - MT2A LTR ERVL -71 462 285 2 906 303 225 0 0 chrX 42171972 42172043 -124478253 - Lx9 LINE L1 -708 6936 6866 2 906 232 378 42 36 chrX 42172158 42172233 -124478063 - MT2A LTR ERVL -338 195 3 2 906 365 328 8 8 chrX 42172233 42172350 -124477946 - MTEa LTR MaLR -260 119 3 2 906 1552 245 26 8 chrX 42172364 42172755 -124477541 - Lx9 LINE L1 -386 7258 6861 2 906 28440 145 18 45 chrX 42172810 42174395 -124475901 + L1_Mus1 LINE L1 584 2146 -3737 2 906 244 0 56 0 chrX 42174395 42174431 -124475865 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2 906 28440 127 14 13 chrX 42174431 42176121 -124474175 + L1_Mus1 LINE L1 2147 3839 -2044 2 906 1122 69 16 54 chrX 42176121 42176306 -124473990 - L1Md_F3 LINE L1 -1 6583 6406 2 906 28440 119 17 9 chrX 42176306 42178663 -124471633 + L1_Mus1 LINE L1 3840 6205 -362 2 906 6136 76 21 6 chrX 42178665 42179490 -124470806 + L1Md_F2 LINE L1 5736 6572 -10 2 906 204 149 0 0 chrX 42179506 42179553 -124470743 + (TTAA)n Simple_repeat Simple_repeat 4 50 0 2 906 3074 45 39 3 chrX 42179775 42180157 -124470139 - MTA_Mm LTR MaLR 0 396 1 2 906 7244 89 8 73 chrX 42180157 42181331 -124468965 - MTA_Mm-int LTR MaLR 0 1098 1 2 906 381 176 0 0 chrX 42181397 42181505 -124468791 + (CA)n Simple_repeat Simple_repeat 2 109 0 2 906 31 26 0 0 chrX 42181947 42181985 -124468311 + AT_rich Low_complexity Low_complexity 1 38 0 2 906 902 243 0 45 chrX 42182098 42182318 -124467978 - B3 SINE B2 -6 210 1 2 906 6593 80 27 8 chrX 42182681 42183576 -124466720 - L1_Mus1 LINE L1 -2 6565 5654 2 906 1112 249 76 16 chrX 42183597 42183959 -124466337 - Lx9 LINE L1 -13 7631 7248 2 906 3874 51 2 14 chrX 42183959 42184452 -124465844 - L1Md_F2 LINE L1 0 6582 6096 2 906 1459 51 0 0 chrX 42184453 42184629 -124465667 + L1Md_A LINE L1 5411 5586 -297 2 906 8855 11 0 0 chrX 42184629 42185625 -124464671 + L1Md_A LINE L1 5587 6582 0 2 906 896 70 0 0 chrX 42185625 42185739 -124464557 + L1Md_F2 LINE L1 5892 6005 -577 2 906 1605 258 67 20 chrX 42185753 42186263 -124464033 - Lx9 LINE L1 -417 7227 6694 2 906 21 0 0 0 chrX 42186433 42186454 -124463842 + AT_rich Low_complexity Low_complexity 1 21 0 2 906 857 245 67 41 chrX 42186459 42186727 -124463569 + Lx9 LINE L1 6301 6575 -1069 2 906 183 42 0 0 chrX 42187385 42187409 -124462887 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 906 342 291 0 0 chrX 42187630 42187716 -124462580 - Lx9 LINE L1 -987 6657 6572 2 906 938 253 90 35 chrX 42187722 42188033 -124462263 - Lx5 LINE L1 -3 7047 6720 2 906 404 186 0 0 chrX 42188043 42188113 -124462183 - Lx5 LINE L1 -546 6504 6435 2 906 27 73 0 0 chrX 42188853 42188908 -124461388 + AT_rich Low_complexity Low_complexity 1 55 0 2 906 1528 235 107 10 chrX 42189187 42189672 -124460624 + Lx6 LINE L1 4997 5528 -352 2 906 2779 67 5 3 chrX 42189681 42190058 -124460238 - MTA_Mm LTR MaLR -18 378 1 2 906 1787 258 89 28 chrX 42190058 42190317 -124459979 + Lx6 LINE L1 5524 5791 -1669 2 906 420 20 0 0 chrX 42190317 42190366 -124459930 + (GAAA)n Simple_repeat Simple_repeat 1 49 0 2 906 1787 262 134 21 chrX 42190366 42190849 -124459447 + Lx6 LINE L1 5792 6374 -676 2 906 1309 311 46 68 chrX 42190844 42191116 -124459180 + Lx6 LINE L1 6483 6749 -301 2 906 333 0 0 0 chrX 42191116 42191153 -124459143 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 906 1309 311 46 68 chrX 42191153 42191442 -124458854 + Lx6 LINE L1 6750 7032 -18 2 906 225 0 0 0 chrX 42191681 42191706 -124458590 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 906 3455 270 80 72 chrX 42191785 42193116 -124457180 - Lx5 LINE L1 -5 7045 5705 2 906 1793 225 27 176 chrX 42193120 42193832 -124456464 - RMER19C LTR ERVK -5 606 1 2 906 764 176 0 0 chrX 42193832 42193963 -124456333 - L1_Mur2 LINE L1 -172 5705 5575 2 906 459 350 5 16 chrX 42194101 42194290 -124456006 - Lx9 LINE L1 -1085 6559 6373 2 906 32 98 0 0 chrX 42194312 42194414 -124455882 + AT_rich Low_complexity Low_complexity 1 102 0 2 906 249 53 0 0 chrX 42194573 42194611 -124455685 - L1_Mus2 LINE L1 -2 6564 6527 2 906 26328 118 11 29 chrX 42194648 42197011 -124453285 - L1_Mus2 LINE L1 -1 6565 4203 2 906 369 0 0 0 chrX 42197011 42197052 -124453244 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 906 26328 135 17 29 chrX 42197052 42200294 -124450002 - L1_Mus2 LINE L1 -1681 4202 1051 2 906 492 236 141 26 chrX 42200292 42200621 -124449675 - L1_Mus2 LINE L1 -5846 770 364 2 906 2059 282 75 57 chrX 42200738 42201357 -124448939 - Lx9 LINE L1 -1552 5921 5263 2 906 583 78 0 22 chrX 42201357 42201449 -124448847 + (TA)n Simple_repeat Simple_repeat 2 91 0 2 906 2059 278 76 60 chrX 42201449 42201815 -124448481 - Lx9 LINE L1 -585 5262 4888 2 906 500 335 5 26 chrX 42201809 42202002 -124448294 + Lx9 LINE L1 6623 6811 -833 2 906 429 0 49 0 chrX 42202126 42202187 -124448109 + (TA)n Simple_repeat Simple_repeat 2 65 0 2 906 213 373 13 0 chrX 42202255 42202330 -124447966 + B1_Mus2 SINE Alu 7 82 -65 2 906 344 304 26 26 chrX 42202549 42202701 -124447595 + L1MC3 LINE L1 7562 7713 -72 2 113 10303 140 7 5 chrX 42204330 42206885 -124443411 - L1_Mus3 LINE L1 -7 6631 4071 2 907 16251 97 11 8 chrX 42206886 42209925 -124440371 + L1Md_F2 LINE L1 446 3476 -2407 2 907 5055 78 0 0 chrX 42209925 42210587 -124439709 + L1Md_F2 LINE L1 4925 5586 -297 2 907 7717 47 22 5 chrX 42210587 42211552 -124438744 + L1Md_F2 LINE L1 5587 6567 -15 2 907 11604 203 65 16 chrX 42211577 42214987 -124435309 - L1VL4 LINE L1 -1809 4077 503 2 907 240 88 35 17 chrX 42215018 42215076 -124435220 + (TTTTTG)n Simple_repeat Simple_repeat 2 60 0 2 907 21 0 0 0 chrX 42215229 42215250 -124435046 + AT_rich Low_complexity Low_complexity 1 21 0 2 907 201 167 36 36 chrX 42215317 42215354 -124434942 + T-rich Low_complexity Low_complexity 20 57 0 2 907 1048 95 7 0 chrX 42215354 42215501 -124434795 - B1_Mus1 SINE Alu 0 148 1 2 907 201 167 36 36 chrX 42215501 42215519 -124434777 + T-rich Low_complexity Low_complexity 2 19 0 2 907 1243 157 9 0 chrX 42217269 42217492 -124432804 - Lx2 LINE L1 -1 6996 6772 2 907 1183 259 20 7 chrX 42217565 42217857 -124432439 + Lx7 LINE L1 7040 7335 -361 2 907 214 50 50 0 chrX 42217857 42217897 -124432399 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 3 907 324 193 130 9 chrX 42217914 42218029 -124432267 + Lx7 LINE L1 7327 7455 -241 2 907 2461 59 7 0 chrX 42218210 42218515 -124431781 - L1_Mm LINE L1 -138 5745 5439 3 907 20938 70 3 11 chrX 42219018 42222732 -124427564 - L1Md_F2 LINE L1 0 6582 2965 3 907 7852 60 1 0 chrX 42222732 42223728 -124426568 + L1Md_F3 LINE L1 5588 6584 0 3 907 16124 91 6 40 chrX 42223728 42224846 -124425450 - L1Md_F2 LINE L1 -2919 2964 1838 3 907 1557 211 44 32 chrX 42224835 42225340 -124424956 + L1Md_F LINE L1 122 632 -5887 3 907 4251 83 2 1 chrX 42225335 42226236 -124424060 - L1Md_F LINE L1 -4041 1842 941 3 907 3621 79 2 10 chrX 42226236 42226735 -124423561 - L1Md_F3 LINE L1 0 6584 6090 3 907 4052 100 3 33 chrX 42226735 42227408 -124422888 + L1MA6 LINE L1 5207 5835 -465 3 907 4311 66 4 2 chrX 42227399 42227946 -124422350 - L1Md_F LINE L1 -5657 862 315 3 907 443 242 0 10 chrX 42227946 42228042 -124422254 - MTC LTR MaLR -207 214 120 3 907 249 311 9 9 chrX 42228618 42228725 -124421571 - L1M2 LINE L1 -487 5804 5698 3 907 247 309 108 24 chrX 42228811 42228977 -124421319 - L1M2 LINE L1 -630 5670 5491 3 907 26 30 0 0 chrX 42230289 42230322 -124419974 + AT_rich Low_complexity Low_complexity 1 33 0 3 907 285 75 0 0 chrX 42230584 42230624 -124419672 + (TTTTG)n Simple_repeat Simple_repeat 3 42 0 3 907 207 133 0 0 chrX 42230781 42230826 -124419470 + (A)n Simple_repeat Simple_repeat 1 45 0 3 907 426 39 0 0 chrX 42230831 42230883 -124419413 + (CAAAC)n Simple_repeat Simple_repeat 3 54 0 3 907 602 307 4 26 chrX 42230915 42231091 -124419205 + B3 SINE B2 10 173 -22 3 907 376 356 8 0 chrX 42231402 42231520 -124418776 + B1F2 SINE Alu 1 119 -30 3 907 198 71 0 0 chrX 42231524 42231552 -124418744 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 907 387 0 0 0 chrX 42231553 42231596 -124418700 + (CAAT)n Simple_repeat Simple_repeat 4 46 0 3 907 291 315 0 43 chrX 42231702 42231795 -124418501 - MTEb LTR MaLR -180 199 111 3 907 217 424 22 0 chrX 42232144 42232236 -124418060 + B3A SINE B2 71 164 -34 3 907 348 24 0 0 chrX 42232248 42232289 -124418007 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 907 921 32 16 8 chrX 42232326 42232452 -124417844 + (TA)n Simple_repeat Simple_repeat 2 128 0 3 907 260 260 40 14 chrX 42232689 42232763 -124417533 + B4A SINE B4 217 292 0 3 907 342 67 0 0 chrX 42233064 42233109 -124417187 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 907 525 317 85 10 chrX 42233824 42234025 -124416271 - B3 SINE B2 0 216 1 3 907 495 167 0 0 chrX 42234133 42234271 -124416025 + GA-rich Low_complexity Low_complexity 1 138 0 3 907 584 356 32 7 chrX 42234552 42234835 -124415461 - B4 SINE B4 -2 290 1 3 907 23 68 0 0 chrX 42235082 42235126 -124415170 + AT_rich Low_complexity Low_complexity 1 44 0 3 907 530 174 9 0 chrX 42235754 42235863 -124414433 + (TA)n Simple_repeat Simple_repeat 1 110 0 3 907 25 0 0 0 chrX 42235898 42235923 -124414373 + AT_rich Low_complexity Low_complexity 1 25 0 3 907 778 232 36 0 chrX 42236249 42236443 -124413853 + Lx9 LINE L1 7283 7483 -161 3 907 31 58 0 0 chrX 42236552 42236604 -124413692 + AT_rich Low_complexity Low_complexity 1 52 0 3 907 242 254 15 0 chrX 42236685 42236752 -124413544 + L1_Mur1 LINE L1 2503 2570 -3316 3 907 764 277 119 3 chrX 42236792 42237078 -124413218 + ORR1D1 LTR MaLR 3 321 -53 3 907 239 93 23 0 chrX 42237087 42237130 -124413166 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 907 7085 168 59 13 chrX 42237132 42238445 -124411851 - Lx4B LINE L1 -7 7051 5678 3 907 896 255 83 4 chrX 42238523 42238787 -124411509 + MTD LTR MaLR 121 405 -14 3 907 495 342 37 25 chrX 42238840 42239401 -124410895 + L1M2 LINE L1 2613 3180 -2963 3 907 26 88 0 0 chrX 42239468 42239536 -124410760 + AT_rich Low_complexity Low_complexity 1 68 0 3 907 287 229 46 59 chrX 42239707 42239860 -124410436 + L1M2 LINE L1 3845 3995 -2145 3 907 261 57 0 0 chrX 42239895 42239930 -124410366 + (CAA)n Simple_repeat Simple_repeat 3 37 0 3 907 1181 178 24 128 chrX 42240911 42241207 -124409089 + ORR1A4 LTR MaLR 4 268 -61 3 907 7977 52 6 6 chrX 42241209 42242707 -124407589 - L1Md_F2 LINE L1 -12 6570 5070 3 907 1054 88 0 0 chrX 42242708 42242845 -124407451 - L1_Mm LINE L1 -211 5672 5536 3 907 2779 93 0 0 chrX 42242836 42243221 -124407075 - L1Md_F2 LINE L1 -816 5067 4683 3 907 326 77 58 0 chrX 42243221 42243273 -124407023 + ORR1A4 LTR MaLR 267 321 -8 3 907 5002 173 67 44 chrX 42243277 42244373 -124405923 + ORR1A4-int LTR MaLR 1 1121 -842 3 907 749 53 0 0 chrX 42244373 42244467 -124405829 + RMER2 LTR ERV1 1 94 -473 3 907 673 189 83 57 chrX 42244471 42244628 -124405668 + RMER2 LTR ERV1 407 567 0 3 907 2836 171 112 52 chrX 42244629 42245329 -124404967 + ORR1A4-int LTR MaLR 1001 1772 -191 3 907 2361 120 5 16 chrX 42245329 42245702 -124404594 - Lx LINE L1 -7 6647 6279 3 907 1581 160 128 87 chrX 42245702 42245742 -124404554 + ORR1A4-int LTR MaLR 1340 1370 -139 3 907 4760 108 153 1 chrX 42245742 42246514 -124403782 + RMER17D LTR ERVK 1 889 0 3 907 1581 160 128 87 chrX 42246514 42246608 -124403688 + ORR1A4-int LTR MaLR 1371 1479 -30 3 907 759 61 31 0 chrX 42246608 42246721 -124403575 - L1_Mus4 LINE L1 -260 6394 6278 3 907 685 168 0 127 chrX 42246762 42246919 -124403377 + ORR1A4 LTR MaLR 1 137 -192 3 907 4065 190 53 54 chrX 42246921 42247931 -124402365 + RMER21B LTR ERV1 1 945 -2 3 907 331 365 67 15 chrX 42248106 42248301 -124401995 - Lx8 LINE L1 -152 7321 7117 3 907 3425 186 68 1 chrX 42248549 42249224 -124401072 + RMER6D LTR ERVK 1 720 0 3 907 195 162 0 0 chrX 42249226 42249263 -124401033 + (TATATG)n Simple_repeat Simple_repeat 6 42 0 3 907 974 221 45 127 chrX 42249558 42249961 -124400335 - ORR1D1 LTR MaLR -2 372 3 3 907 1286 270 67 52 chrX 42251147 42251748 -124398548 - Lx6 LINE L1 -55 7405 6460 3 907 641 262 14 0 chrX 42251748 42251889 -124398407 - B1_Mur2 SINE Alu -6 143 1 3 907 815 360 44 26 chrX 42251965 42252533 -124397763 - Lx8 LINE L1 -153 7320 6743 3 907 1573 176 67 78 chrX 42252674 42253032 -124397264 + ORR1B1 LTR MaLR 41 394 0 3 907 424 362 119 29 chrX 42253047 42253491 -124396805 - Lx8 LINE L1 -1396 6077 5594 3 907 1533 298 73 23 chrX 42253634 42254878 -124395418 - L1M4b LINE L1 -1128 5878 4542 3 907 386 161 0 0 chrX 42255065 42255127 -124395169 + Lx4A LINE L1 6546 6607 -451 3 907 3090 85 0 0 chrX 42255154 42255564 -124394732 - L1_Mus2 LINE L1 0 6566 6157 3 907 2846 161 67 19 chrX 42255573 42256428 -124393868 + L1_Mus2 LINE L1 5823 7055 -3 3 907 22 0 0 0 chrX 42256428 42256450 -124393846 + AT_rich Low_complexity Low_complexity 1 22 0 3 907 505 328 138 17 chrX 42256605 42257151 -124393145 - L1M4b LINE L1 -5156 1946 1335 3 907 192 97 0 0 chrX 42257274 42257305 -124392991 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 907 806 246 25 122 chrX 42257676 42258139 -124392157 - L1_Mur3 LINE L1 -5842 1228 872 3 907 260 111 0 22 chrX 42258748 42258794 -124391502 + (TTTTC)n Simple_repeat Simple_repeat 5 49 0 3 907 4570 238 58 16 chrX 42258794 42259968 -124390328 - Lx5 LINE L1 -4 7046 5689 3 907 280 79 0 0 chrX 42259965 42260003 -124390293 + Lx5 LINE L1 5651 5688 -1362 3 907 3112 148 24 30 chrX 42260014 42260417 -124389879 - L1_Mur2 LINE L1 -1148 4729 4322 3 907 1752 150 110 45 chrX 42260417 42260863 -124389433 + IAPLTR2_Mm LTR ERVK 1 475 0 3 907 3112 148 24 30 chrX 42260863 42261050 -124389246 - L1_Mur2 LINE L1 -1556 4321 4144 3 907 423 0 0 0 chrX 42261181 42261228 -124389068 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 907 278 342 26 26 chrX 42261267 42261384 -124388912 - B4A SINE B4 0 292 176 3 907 30 45 0 0 chrX 42261412 42261456 -124388840 + AT_rich Low_complexity Low_complexity 1 44 0 3 907 237 108 0 0 chrX 42261936 42261973 -124388323 + (TAA)n Simple_repeat Simple_repeat 3 39 0 3 907 2227 117 36 3 chrX 42262252 42262612 -124387684 + Lx3A LINE L1 5907 6278 -703 3 907 890 77 0 15 chrX 42262625 42262757 -124387539 - L1_Mus1 LINE L1 -1 6566 6437 3 907 1453 114 12 32 chrX 42262757 42263010 -124387286 - RLTR13D2 LTR ERVK -196 827 580 3 907 1010 83 14 7 chrX 42262998 42263143 -124387153 - RLTR13D2 LTR ERVK -477 329 184 3 907 207 0 0 0 chrX 42263143 42263166 -124387130 + (TTG)n Simple_repeat Simple_repeat 1 23 0 3 907 7391 84 3 6 chrX 42263181 42264261 -124386035 - L1Md_F2 LINE L1 0 6582 5506 3 907 1620 180 23 7 chrX 42264261 42264569 -124385727 + Lx3A LINE L1 6667 6979 -2 3 907 269 333 11 11 chrX 42264599 42264687 -124385609 + PB1D10 SINE Alu 22 109 -8 3 907 22 35 0 0 chrX 42265478 42265507 -124384789 + AT_rich Low_complexity Low_complexity 1 29 0 3 907 212 190 0 23 chrX 42265533 42265576 -124384720 + CT-rich Low_complexity Low_complexity 4 45 0 3 907 1336 178 13 17 chrX 42265646 42265881 -124384415 - Lx5 LINE L1 -366 6684 6451 3 907 278 132 19 0 chrX 42266989 42267042 -124383254 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 907 241 383 28 14 chrX 42267122 42267265 -124383031 + MLT1E3 LTR MaLR 469 613 -11 3 907 180 0 0 0 chrX 42267462 42267482 -124382814 + (T)n Simple_repeat Simple_repeat 1 20 0 3 907 33 25 0 0 chrX 42267837 42267877 -124382419 + AT_rich Low_complexity Low_complexity 1 40 0 3 907 347 308 42 17 chrX 42268472 42268591 -124381705 + Charlie4z DNA MER1_type 45 166 -1 3 907 951 263 9 9 chrX 42268611 42268822 -124381474 - B3 SINE B2 -5 211 1 3 907 207 0 0 0 chrX 42268984 42269007 -124381289 + (TAA)n Simple_repeat Simple_repeat 2 24 0 3 907 258 313 24 0 chrX 42269060 42269143 -124381153 - Lx8 LINE L1 -125 7348 7264 3 907 21 36 0 0 chrX 42269164 42269192 -124381104 + AT_rich Low_complexity Low_complexity 1 28 0 3 907 2017 323 62 30 chrX 42269325 42270554 -124379742 + Lx8 LINE L1 5518 6968 -676 3 907 434 181 13 46 chrX 42270591 42270789 -124379507 + Lx LINE L1 5706 5805 -777 3 907 288 0 0 0 chrX 42270789 42270821 -124379475 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 907 414 53 0 0 chrX 42270821 42270877 -124379419 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 907 322 45 0 62 chrX 42270878 42270926 -124379370 + Lx2 LINE L1 5877 5921 -1076 3 907 3889 86 45 0 chrX 42270924 42271841 -124378455 + L1Md_F LINE L1 591 1559 -4324 3 907 21 36 0 0 chrX 42272449 42272477 -124377819 + AT_rich Low_complexity Low_complexity 1 28 0 3 907 24 0 0 0 chrX 42272522 42272546 -124377750 + AT_rich Low_complexity Low_complexity 1 24 0 3 907 21 71 0 0 chrX 42272675 42272717 -124377579 + AT_rich Low_complexity Low_complexity 1 42 0 4 907 227 244 56 0 chrX 42272998 42273088 -124377208 - Lx7 LINE L1 0 7696 7602 4 907 213 94 0 0 chrX 42273119 42273151 -124377145 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 4 907 307 287 27 36 chrX 42273208 42273320 -124376976 + Lx7 LINE L1 7211 7321 -375 4 907 25 31 0 0 chrX 42273490 42273522 -124376774 + AT_rich Low_complexity Low_complexity 1 32 0 4 907 3143 256 95 75 chrX 42273551 42274730 -124375566 - Lx7 LINE L1 -152 7544 6342 4 907 459 237 110 59 chrX 42274750 42274859 -124375437 + Lx7 LINE L1 6061 6174 -1522 4 907 387 0 0 0 chrX 42274859 42274902 -124375394 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 907 459 237 110 59 chrX 42274902 42275065 -124375231 + Lx7 LINE L1 6175 6347 -1349 4 907 23 0 0 0 chrX 42276225 42276248 -124374048 + AT_rich Low_complexity Low_complexity 1 23 0 4 907 7385 80 2 8 chrX 42276537 42277522 -124372774 - L1Md_F2 LINE L1 0 6582 5604 4 907 1102 95 0 0 chrX 42277661 42277808 -124372488 - B1_Mm SINE Alu 0 147 1 4 907 24 0 0 0 chrX 42277902 42277926 -124372370 + AT_rich Low_complexity Low_complexity 1 24 0 4 907 313 147 40 0 chrX 42278403 42278478 -124371818 + (TCTA)n Simple_repeat Simple_repeat 2 79 0 4 907 3918 52 0 0 chrX 42278505 42278989 -124371307 - L1Md_F2 LINE L1 -12 6570 6087 4 907 205 200 0 0 chrX 42279110 42279150 -124371146 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 907 4124 117 32 5 chrX 42279346 42279971 -124370325 + L1_Mus4 LINE L1 5945 6586 -50 4 907 293 0 0 26 chrX 42279973 42280011 -124370285 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 4 907 437 0 19 0 chrX 42280559 42280612 -124369684 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 4 907 1083 94 0 0 chrX 42280612 42280750 -124369546 - B1_Mus2 SINE Alu -9 138 1 4 907 750 122 0 17 chrX 42280776 42280893 -124369403 - B1_Mus1 SINE Alu 0 148 34 4 907 322 96 58 0 chrX 42281922 42281974 -124368322 + B1_Mm SINE Alu 93 147 0 4 907 213 93 0 138 chrX 42281974 42282027 -124368269 + A-rich Low_complexity Low_complexity 1 42 0 4 907 1071 88 0 13 chrX 42282027 42282176 -124368120 + B1_Mus1 SINE Alu 1 147 -1 4 907 213 93 0 138 chrX 42282176 42282209 -124368087 + A-rich Low_complexity Low_complexity 43 75 0 4 907 447 315 47 45 chrX 42282266 42282738 -124367558 - Lx9 LINE L1 -9 7635 7163 4 907 6319 56 1 0 chrX 42283094 42283893 -124366403 - L1Md_F3 LINE L1 -14 6570 5771 4 907 477 54 0 0 chrX 42283893 42283949 -124366347 + L1Md_F2 LINE L1 5531 5586 -297 4 907 7899 55 3 1 chrX 42283949 42284941 -124365355 + L1Md_F2 LINE L1 5587 6580 -2 4 907 972 304 55 57 chrX 42285011 42285430 -124364866 + Lx6 LINE L1 7017 7434 -26 4 907 183 42 0 0 chrX 42285587 42285611 -124364685 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 4 907 421 314 112 39 chrX 42285613 42285983 -124364313 - MTE2a LTR MaLR -9 370 11 4 907 2084 145 0 3 chrX 42286112 42286451 -124363845 + Lx LINE L1 6317 6654 0 4 907 3491 250 21 8 chrX 42288163 42288933 -124361363 - Lx5 LINE L1 0 7050 6271 4 907 374 216 0 0 chrX 42288922 42288996 -124361300 + Lx7 LINE L1 6677 6750 -946 4 907 536 196 10 0 chrX 42289052 42289149 -124361147 + Lx6 LINE L1 6748 6845 -615 4 907 372 71 0 0 chrX 42289156 42289212 -124361084 + (CATA)n Simple_repeat Simple_repeat 2 57 0 4 907 782 86 0 0 chrX 42289214 42289319 -124360977 + B1_Mm SINE Alu 43 147 0 4 907 287 25 0 24 chrX 42289320 42289361 -124360935 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 4 907 384 264 94 0 chrX 42289419 42289525 -124360771 + Lx7 LINE L1 6908 7023 -673 4 907 331 323 120 43 chrX 42289522 42289823 -124360473 - Lx8 LINE L1 -120 7353 7030 4 907 969 124 12 6 chrX 42289840 42290010 -124360286 - Lx2 LINE L1 0 6997 6827 4 907 21 0 0 0 chrX 42290126 42290147 -124360149 + AT_rich Low_complexity Low_complexity 1 21 0 4 907 530 208 87 0 chrX 42290150 42290299 -124359997 - Lx2A1 LINE L1 -9 6999 6838 4 907 8906 112 40 8 chrX 42290378 42291853 -124358443 - Lx3_Mus LINE L1 0 7009 5497 4 907 1951 331 76 37 chrX 42291846 42292610 -124357686 - Lx8 LINE L1 -498 6975 6188 4 907 432 0 0 0 chrX 42292610 42292658 -124357638 + (TC)n Simple_repeat Simple_repeat 2 49 0 4 907 1951 331 76 37 chrX 42292658 42293088 -124357208 - Lx8 LINE L1 -1286 6187 5734 4 907 549 313 31 5 chrX 42293194 42293390 -124356906 + Lx8 LINE L1 6249 6449 -1024 4 907 523 290 122 61 chrX 42293391 42293685 -124356611 + Lx8 LINE L1 6818 7129 -344 4 907 21 0 0 0 chrX 42293869 42293890 -124356406 + AT_rich Low_complexity Low_complexity 1 21 0 4 907 25 0 0 0 chrX 42295384 42295409 -124354887 + AT_rich Low_complexity Low_complexity 1 25 0 4 907 683 67 0 0 chrX 42295616 42295705 -124354591 + B1_Mus2 SINE Alu 58 146 -1 4 907 1163 216 17 65 chrX 42295722 42296074 -124354222 - Lx7 LINE L1 -174 7522 7188 4 907 3747 247 60 7 chrX 42296122 42297081 -124353215 - Lx7 LINE L1 -473 7223 6214 4 907 2895 207 58 0 chrX 42297832 42298441 -124351855 + Lx4B LINE L1 6399 7042 -16 4 907 702 171 7 13 chrX 42298462 42298566 -124351730 + polypurine Low_complexity Low_complexity 2 105 0 4 907 1346 22 0 32 chrX 42298566 42298752 -124351544 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 907 702 171 7 13 chrX 42298752 42298801 -124351495 + polypurine Low_complexity Low_complexity 106 154 0 4 907 848 82 8 0 chrX 42298802 42298924 -124351372 + (GAAA)n Simple_repeat Simple_repeat 4 126 0 4 907 881 296 96 19 chrX 42299880 42300204 -124350092 + RCHARR1 DNA MER1_type 101 449 -525 4 907 26 74 0 0 chrX 42300226 42300280 -124350016 + AT_rich Low_complexity Low_complexity 1 54 0 4 907 248 370 94 43 chrX 42300309 42300586 -124349710 - B4A SINE B4 0 292 2 4 907 285 287 127 32 chrX 42300586 42300705 -124349591 + RCHARR1 DNA MER1_type 838 969 -5 4 907 223 337 12 24 chrX 42300800 42300885 -124349411 + MER5B DNA MER1_type 89 172 -6 4 907 291 250 0 0 chrX 42301160 42301260 -124349036 + (TA)n Simple_repeat Simple_repeat 1 100 0 4 907 2176 324 85 21 chrX 42301366 42302347 -124347949 + Lx8 LINE L1 6240 7282 -191 4 907 308 322 57 41 chrX 42303572 42303695 -124346601 - MTEa LTR MaLR -2 377 253 4 907 7801 132 17 13 chrX 42303779 42304411 -124345885 + Lx2A LINE L1 5741 6376 -632 4 907 441 0 0 0 chrX 42304411 42304460 -124345836 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 907 7801 132 17 13 chrX 42304460 42305089 -124345207 + Lx2A LINE L1 6377 7007 -1 4 907 1065 268 17 27 chrX 42305224 42305523 -124344773 + Lx9 LINE L1 6414 6709 -935 4 907 207 100 0 0 chrX 42305809 42305839 -124344457 + (TTA)n Simple_repeat Simple_repeat 1 30 0 4 907 1019 319 57 28 chrX 42306394 42306817 -124343479 + Lx8 LINE L1 6899 7333 -140 4 907 22 56 0 0 chrX 42306923 42306959 -124343337 + AT_rich Low_complexity Low_complexity 1 36 0 4 907 26 50 0 0 chrX 42307056 42307096 -124343200 + AT_rich Low_complexity Low_complexity 1 40 0 4 907 28 61 0 0 chrX 42307137 42307186 -124343110 + AT_rich Low_complexity Low_complexity 1 49 0 4 907 7069 89 7 2 chrX 42307489 42308478 -124341818 + L1_Mus3 LINE L1 5645 6638 0 4 907 296 277 269 6 chrX 42309308 42309468 -124340828 + Lx7 LINE L1 7135 7336 -360 4 907 470 61 15 0 chrX 42309468 42309534 -124340762 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 4 907 7872 44 9 1 chrX 42310552 42311748 -124338548 - L1Md_F2 LINE L1 0 6582 5373 4 907 968 55 16 0 chrX 42311748 42311875 -124338421 + B1_Mm SINE Alu 19 147 0 4 907 198 0 0 0 chrX 42311877 42311899 -124338397 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 907 372 211 45 27 chrX 42311970 42312082 -124338214 - Lx2A1 LINE L1 -4 7004 6891 4 907 1508 171 103 12 chrX 42312712 42313043 -124337253 - L1_Mur3 LINE L1 -1558 4322 3962 4 907 1042 222 104 9 chrX 42313043 42313380 -124336916 - L1_Mur3 LINE L1 -2645 3235 2867 4 907 7240 99 9 9 chrX 42313375 42314729 -124335567 - L1_Mus2 LINE L1 0 6566 5215 4 907 5220 233 63 19 chrX 42314722 42317172 -124333124 - L1_Mur3 LINE L1 -3021 2859 296 4 907 2633 60 0 12 chrX 42317235 42317575 -124332721 + L1Md_F3 LINE L1 5250 5585 -298 4 907 7656 55 11 2 chrX 42317576 42318551 -124331745 + L1Md_F3 LINE L1 5587 6570 -14 4 907 257 67 0 0 chrX 42318635 42318680 -124331616 - L1_Mus1 LINE L1 0 6567 6523 4 907 927 71 7 48 chrX 42318947 42319094 -124331202 + L1_Mus1 LINE L1 6427 6567 0 4 907 480 111 14 0 chrX 42319350 42319422 -124330874 + tRNA-Val-GTG tRNA tRNA 1 73 -3 4 907 1083 76 0 7 chrX 42319440 42319585 -124330711 + B1_Mm SINE Alu 2 145 -2 4 907 30 27 0 0 chrX 42320075 42320112 -124330184 + AT_rich Low_complexity Low_complexity 1 37 0 4 907 317 259 25 0 chrX 42321964 42322045 -124328251 + MLT2B3 LTR ERVL 6 88 -466 4 907 856 315 27 45 chrX 42322060 42322352 -124327944 + MLT2B3 LTR ERVL 151 437 -117 4 907 700 308 212 20 chrX 42324391 42324798 -124325498 - Lx8 LINE L1 -156 7317 6833 4 907 1689 214 23 20 chrX 42324790 42325134 -124325162 + Lx4A LINE L1 6708 7052 -6 4 907 246 62 0 0 chrX 42325136 42325168 -124325128 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 4 907 1689 307 73 43 chrX 42325198 42326774 -124323522 - Lx8 LINE L1 -616 6857 5236 4 907 1027 267 80 10 chrX 42326935 42327321 -124322975 + L1_Mur3 LINE L1 4515 4927 -953 4 907 803 190 0 6 chrX 42327407 42327571 -124322725 + Lx2 LINE L1 6833 6995 -2 4 907 1823 251 40 111 chrX 42327622 42328245 -124322051 + Lx6 LINE L1 6700 7278 -182 4 907 183 80 0 0 chrX 42328252 42328277 -124322019 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 4 907 240 338 0 0 chrX 42328346 42328426 -124321870 + Lx7 LINE L1 7219 7298 -398 4 907 228 182 18 0 chrX 42328439 42328494 -124321802 + T-rich Low_complexity Low_complexity 4 59 0 4 907 22 35 0 0 chrX 42328686 42328715 -124321581 + AT_rich Low_complexity Low_complexity 1 29 0 4 907 710 301 86 39 chrX 42328741 42329021 -124321275 + MTC LTR MaLR 120 412 -9 4 907 626 304 21 48 chrX 42329028 42329363 -124320933 + L1_Mur3 LINE L1 4939 5264 -616 4 907 851 238 55 216 chrX 42329987 42330090 -124320206 - RLTR13D5 LTR ERVK 0 902 813 4 907 1125 75 0 0 chrX 42330090 42330237 -124320059 + B1_Mus2 SINE Alu 1 147 0 4 907 6744 84 15 19 chrX 42330237 42331219 -124319077 - RLTR13D5 LTR ERVK -92 931 1 4 907 221 270 13 13 chrX 42332334 42332409 -124317887 + (TATG)n Simple_repeat Simple_repeat 4 78 0 4 907 330 184 9 37 chrX 42332702 42332809 -124317487 - Lx5 LINE L1 -3 7047 6944 4 907 290 213 0 74 chrX 42332812 42332893 -124317403 + Lx5 LINE L1 6841 6915 -135 4 907 265 238 175 0 chrX 42333013 42333076 -124317220 - B4A SINE B4 -207 85 12 5 907 33 25 0 0 chrX 42333082 42333122 -124317174 + AT_rich Low_complexity Low_complexity 1 40 0 5 907 216 97 0 0 chrX 42333602 42333633 -124316663 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 5 907 4043 82 71 12 chrX 42333649 42333947 -124316349 + L1Md_F2 LINE L1 4949 5246 -637 5 907 4583 69 6 17 chrX 42333947 42334578 -124315718 + L1Md_F2 LINE L1 5958 6581 -1 5 907 4043 82 71 12 chrX 42334578 42334882 -124315414 + L1Md_F2 LINE L1 5247 5586 -297 5 907 7416 67 13 4 chrX 42334883 42335868 -124314428 + L1Md_F2 LINE L1 5589 6582 0 5 908 564 292 125 51 chrX 42336324 42336677 -124313619 + MTE2b LTR MaLR 1 379 0 5 908 250 276 52 0 chrX 42337249 42337365 -124312931 - Lx9 LINE L1 -21 7623 7502 5 908 962 41 0 8 chrX 42338060 42338184 -124312112 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 5 908 272 353 89 15 chrX 42338431 42338566 -124311730 + MER2B DNA MER2_type 9 153 -183 5 908 545 314 54 39 chrX 42338666 42338924 -124311372 + MER2 DNA MER2_type 79 340 -5 5 908 287 279 0 12 chrX 42338975 42339055 -124311241 + Lx9 LINE L1 7350 7428 -216 5 908 25 65 0 0 chrX 42339313 42339359 -124310937 + AT_rich Low_complexity Low_complexity 1 46 0 5 908 266 314 139 0 chrX 42340015 42340101 -124310195 - Lx8 LINE L1 -211 7262 7165 5 908 2176 200 75 43 chrX 42340111 42340313 -124309983 + RMER5 LTR ERV1 1 208 -326 5 908 700 28 0 45 chrX 42340313 42340425 -124309871 + (GAAA)n Simple_repeat Simple_repeat 2 108 0 5 908 2176 200 75 43 chrX 42340425 42340714 -124309582 + RMER5 LTR ERV1 209 507 -27 5 908 217 254 0 0 chrX 42340714 42340769 -124309527 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 5 908 1264 186 0 4 chrX 42340901 42341128 -124309168 + URR1A DNA MER1_type 1 226 0 5 908 354 317 25 0 chrX 42341136 42341297 -124308999 + L1_Mur3 LINE L1 119 283 -7445 5 908 3929 64 52 3 chrX 42341310 42342034 -124308262 - L1_Mus1 LINE L1 -521 6046 5301 5 908 3587 83 4 14 chrX 42342034 42342524 -124307772 + L1_Mus1 LINE L1 6080 6564 -3 5 908 957 219 136 27 chrX 42342575 42342988 -124307308 + L1_Mur3 LINE L1 871 1252 -5834 5 908 4714 125 31 128 chrX 42342984 42343700 -124306596 + Lx3C LINE L1 4954 5577 -309 5 908 2640 64 32 0 chrX 42343700 42344046 -124306250 + L1_Mus2 LINE L1 6210 6566 0 5 908 8271 138 25 38 chrX 42344046 42345433 -124304863 + Lx3C LINE L1 5578 6970 -6 5 908 3092 208 37 8 chrX 42345424 42346176 -124304120 + L1_Mur3 LINE L1 1257 2030 -3850 5 908 8313 29 1 0 chrX 42346176 42347450 -124302846 - L1Md_A LINE L1 -1 6581 5306 5 908 472 160 10 10 chrX 42347567 42347668 -124302628 + GA-rich Low_complexity Low_complexity 3 103 0 5 908 3562 213 40 11 chrX 42347692 42348588 -124301708 + L1_Mur3 LINE L1 2059 2980 -2900 5 908 2129 77 10 10 chrX 42348588 42348890 -124301406 + L1_Mus1 LINE L1 6266 6567 0 5 908 1458 198 11 144 chrX 42349276 42349334 -124300962 + L1_Mur3 LINE L1 2994 3046 -2834 5 908 932 237 18 14 chrX 42349334 42349556 -124300740 + URR1B DNA MER1_type 2 224 -1 5 908 1458 198 11 144 chrX 42349556 42350065 -124300231 + L1_Mur3 LINE L1 3047 3485 -2395 5 908 283 219 0 0 chrX 42350107 42350171 -124300125 + L1_Mur3 LINE L1 3474 3537 -377 5 908 5721 130 69 18 chrX 42350186 42351143 -124299153 - Lx LINE L1 -7 6647 5642 5 908 6882 108 3 15 chrX 42351149 42352596 -124297700 - L1_Mus2 LINE L1 -8 6558 5130 5 908 2799 114 26 2 chrX 42352599 42353028 -124297268 + L1_Mus2 LINE L1 4700 5138 -745 5 908 3191 134 10 160 chrX 42353029 42353525 -124296771 - L1VL2 LINE L1 -2515 1100 658 5 908 2637 48 6 0 chrX 42353525 42353856 -124296440 - L1_Mus1 LINE L1 -1 6566 6234 5 908 3191 155 0 196 chrX 42353856 42354317 -124295979 - L1VL2 LINE L1 -5678 657 316 5 908 774 284 41 38 chrX 42354967 42355311 -124294985 - RLTR15 LTR ERVK -9 350 6 5 908 267 344 39 59 chrX 42355431 42355533 -124294763 + PB1D7 SINE Alu 14 113 -7 5 908 32 0 0 0 chrX 42356248 42356280 -124294016 + AT_rich Low_complexity Low_complexity 1 32 0 5 908 216 0 0 0 chrX 42356283 42356307 -124293989 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 908 22 0 0 0 chrX 42356419 42356441 -124293855 + AT_rich Low_complexity Low_complexity 1 22 0 5 908 2074 130 11 50 chrX 42356671 42357035 -124293261 + Lx LINE L1 6298 6647 -7 5 908 432 0 0 0 chrX 42357095 42357143 -124293153 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 908 27 73 0 0 chrX 42357195 42357250 -124293046 + AT_rich Low_complexity Low_complexity 1 55 0 5 908 1037 123 7 0 chrX 42357384 42357530 -124292766 - B1_Mus2 SINE Alu 0 147 1 5 908 359 283 88 40 chrX 42358861 42359111 -124291185 + L1VL4 LINE L1 301 562 -5740 5 908 16878 179 47 58 chrX 42359112 42362435 -124287861 + Lx2B LINE L1 1528 4929 -957 5 908 6750 99 53 9 chrX 42362435 42363415 -124286881 + RLTR13D5 LTR ERVK 1 1023 0 5 908 16878 179 47 58 chrX 42363415 42363577 -124286719 + Lx2B LINE L1 4930 4978 -908 5 908 2326 111 0 0 chrX 42363577 42363901 -124286395 + L1_Mus2 LINE L1 6243 6566 0 5 908 16878 179 47 58 chrX 42363901 42364346 -124285950 + Lx2B LINE L1 4979 5415 -471 5 908 35348 35 1 0 chrX 42364347 42369984 -124280312 + L1Md_T LINE L1 1 5589 -297 5 908 8890 7 1 0 chrX 42369984 42370979 -124279317 + L1Md_T LINE L1 5590 6585 0 5 908 24864 169 56 19 chrX 42370979 42372511 -124277785 + Lx2B LINE L1 5587 6988 -12 5 908 815 251 44 25 chrX 42372884 42373013 -124277283 + Lx9 LINE L1 7278 7407 -237 5 908 1661 190 26 0 chrX 42373013 42373318 -124276978 + Lx4A LINE L1 6737 7049 -9 5 908 815 251 44 25 chrX 42373318 42373548 -124276748 + Lx9 LINE L1 7408 7643 -1 5 908 2203 284 96 21 chrX 42373597 42374884 -124275412 + Lx7 LINE L1 5074 6457 -1239 5 908 516 325 29 66 chrX 42374913 42375157 -124275139 + Lx7 LINE L1 6665 6899 -797 5 908 1344 207 21 18 chrX 42375181 42375461 -124274835 - Lx3C LINE L1 -2 6974 6694 5 908 1705 160 41 18 chrX 42375463 42375806 -124274490 + L1_Mur1 LINE L1 4398 4748 -1138 5 908 9961 90 4 1 chrX 42375802 42377311 -124272985 - L1Md_F2 LINE L1 -565 6017 4506 5 908 4076 95 12 14 chrX 42377311 42377899 -124272397 + L1Md_F2 LINE L1 5994 6580 -2 5 908 3088 142 4 4 chrX 42377900 42378408 -124271888 + L1_Mur1 LINE L1 4740 5247 -639 5 908 459 353 118 5 chrX 42378406 42378788 -124271508 + Lx7 LINE L1 6926 7350 -346 5 908 990 191 0 25 chrX 42378909 42379108 -124271188 + B2_Mm2 SINE B2 1 194 -1 5 908 210 150 0 0 chrX 42379325 42379365 -124270931 + (TTA)n Simple_repeat Simple_repeat 1 40 0 5 908 517 211 28 21 chrX 42379597 42379734 -124270562 - Lx5 LINE L1 0 7050 6912 5 908 3908 137 29 43 chrX 42379734 42380496 -124269800 - RMER17A LTR ERVK 0 751 1 5 908 3790 170 12 35 chrX 42380513 42381020 -124269276 + L1_Mur2 LINE L1 4135 4625 -1252 5 908 252 0 0 0 chrX 42381020 42381048 -124269248 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 5 908 3790 170 12 35 chrX 42381048 42381318 -124268978 + L1_Mur2 LINE L1 4626 4894 -983 5 908 596 94 0 5 chrX 42381438 42381549 -124268747 - L1Md_F2 LINE L1 0 6584 6477 5 908 375 60 0 0 chrX 42382220 42382270 -124268026 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 908 2911 43 52 0 chrX 42382284 42382653 -124267643 + RLTR10 LTR ERVK 1 388 -2 5 908 1495 246 47 16 chrX 42383107 42383470 -124266826 - ORR1D1 LTR MaLR 0 374 1 5 908 197 282 25 37 chrX 42384039 42384120 -124266176 + L2a LINE L2 3262 3341 -85 5 908 627 14 0 0 chrX 42384924 42384996 -124265300 + (GA)n Simple_repeat Simple_repeat 1 72 0 5 908 21 36 0 0 chrX 42386350 42386378 -124263918 + AT_rich Low_complexity Low_complexity 1 28 0 5 908 718 156 0 56 chrX 42386549 42386692 -124263604 - Lx3B LINE L1 -1132 5841 5707 5 908 6780 135 41 15 chrX 42386692 42387834 -124262462 + Lx3B LINE L1 5799 6970 -3 5 908 7303 74 28 0 chrX 42388026 42389161 -124261135 - L1Md_F2 LINE L1 -1 6581 5412 5 908 11181 72 1 0 chrX 42389159 42389930 -124260366 - L1Md_A LINE L1 -3141 2742 1971 5 908 243 0 0 0 chrX 42389930 42389957 -124260339 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 908 11181 135 10 15 chrX 42389957 42391636 -124258660 - L1Md_A LINE L1 -3913 1970 301 5 908 3583 35 2 0 chrX 42391639 42392067 -124258229 - L1Md_F2 LINE L1 -458 6124 5696 5 908 3200 59 0 0 chrX 42392067 42392471 -124257825 + L1Md_F2 LINE L1 6179 6582 0 5 908 447 317 8 8 chrX 42393347 42393468 -124256828 - RSINE1 SINE B4 -36 129 9 5 908 1583 140 48 4 chrX 42393944 42394217 -124256079 + Lx LINE L1 6364 6648 -6 5 908 5314 150 35 20 chrX 42394294 42395274 -124255022 - Lx3B LINE L1 -1 6972 5979 5 908 215 304 14 14 chrX 42396521 42396591 -124253705 - ID4 SINE ID -2 81 12 5 908 825 147 24 18 chrX 42398565 42398731 -124251565 + Lx9 LINE L1 7351 7517 -127 5 908 556 212 47 24 chrX 42398729 42398898 -124251398 + Lx9 LINE L1 7464 7636 -8 5 908 22 35 0 0 chrX 42399796 42399825 -124250471 + AT_rich Low_complexity Low_complexity 1 29 0 5 908 17309 4 0 0 chrX 42400503 42402459 -124247837 - L1Md_A LINE L1 -460 5423 3468 5 908 1623 16 0 0 chrX 42402454 42402636 -124247660 + L1Md_A LINE L1 5405 5586 -297 5 908 9034 2 0 0 chrX 42402636 42403632 -124246664 + L1Md_A LINE L1 5587 6582 0 5 908 530 301 61 17 chrX 42404744 42404974 -124245322 - L1MC3 LINE L1 -1370 6415 6176 5 908 828 217 118 63 chrX 42405042 42405357 -124244939 - Lx9 LINE L1 0 7644 7313 5 908 241 144 71 82 chrX 42405401 42405499 -124244797 + Lx9 LINE L1 6162 6258 -1386 5 908 332 272 0 0 chrX 42405514 42405595 -124244701 + Lx9 LINE L1 6306 6386 -1258 5 908 260 247 270 0 chrX 42405600 42405689 -124244607 + Lx9 LINE L1 6526 6638 -1006 5 908 7659 71 4 1 chrX 42405961 42407044 -124243252 - L1_Mus1 LINE L1 0 6567 5482 5 908 19231 140 21 2 chrX 42407035 42410828 -124239468 - L1_Mus1 LINE L1 -1419 4464 599 5 908 222 37 0 0 chrX 42410968 42410995 -124239301 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 908 2703 137 26 2 chrX 42411144 42411598 -124238698 - L1_Mus3 LINE L1 0 6638 6174 5 908 4238 120 7 0 chrX 42411598 42412271 -124238025 - L1_Mm LINE L1 -1761 4122 3445 5 908 355 293 116 44 chrX 42412643 42412961 -124237335 - L1MA6 LINE L1 -29 6271 5931 5 908 579 66 0 0 chrX 42412986 42413062 -124237234 + (TG)n Simple_repeat Simple_repeat 1 76 0 5 908 389 366 27 27 chrX 42413105 42413224 -124237072 + RSINE1 SINE B4 18 136 -29 5 908 405 0 0 0 chrX 42413224 42413269 -124237027 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 908 389 366 27 27 chrX 42413269 42413295 -124237001 + RSINE1 SINE B4 137 162 -3 5 908 26 0 0 0 chrX 42413727 42413753 -124236543 + AT_rich Low_complexity Low_complexity 1 26 0 5 908 541 312 12 0 chrX 42414256 42414416 -124235880 - MER34 LTR ERV1 -367 175 14 5 908 300 274 45 30 chrX 42414457 42414589 -124235707 - L1M4 LINE L1 -2494 3652 3519 5 908 22 35 0 0 chrX 42414596 42414625 -124235671 + AT_rich Low_complexity Low_complexity 1 29 0 5 908 323 323 141 26 chrX 42414786 42415177 -124235119 - L1MD LINE L1 -2863 3283 2848 5 908 581 299 36 38 chrX 42415192 42415638 -124234658 - L1MD LINE L1 -3270 2876 2426 5 908 343 262 32 45 chrX 42415848 42416004 -124234292 + Lx8 LINE L1 7317 7470 -3 5 908 206 392 69 6 chrX 42416850 42417009 -124233287 - MIRb SINE MIR -15 253 85 5 908 25 65 0 0 chrX 42417232 42417278 -124233018 + AT_rich Low_complexity Low_complexity 1 46 0 5 908 9174 136 49 23 chrX 42417326 42418769 -124231527 - L1_Mur2 LINE L1 -2321 3556 2048 5 908 252 0 0 0 chrX 42418769 42418797 -124231499 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 908 9174 136 49 23 chrX 42418797 42419037 -124231259 - L1_Mur2 LINE L1 -3830 2047 1827 5 908 257 0 30 0 chrX 42419037 42419070 -124231226 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 908 9174 136 49 23 chrX 42419070 42419105 -124231191 - L1_Mur2 LINE L1 -4051 1826 1791 5 908 4641 181 14 0 chrX 42419106 42419936 -124230360 + Lx4A LINE L1 6217 7058 0 5 908 1775 203 41 11 chrX 42420233 42420602 -124229694 + RMER5 LTR ERV1 129 508 -26 5 908 324 120 0 0 chrX 42420628 42420678 -124229618 + (TGAA)n Simple_repeat Simple_repeat 3 52 0 5 908 343 272 25 0 chrX 42420836 42420917 -124229379 + URR1A DNA MER1_type 1 83 -143 6 908 456 132 13 0 chrX 42420933 42421009 -124229287 - L1_Mur2 LINE L1 -6622 90 14 6 908 3305 154 33 0 chrX 42421013 42421559 -124228737 + Lx4A LINE L1 5812 6375 -683 6 908 885 57 0 0 chrX 42421559 42421682 -124228614 + L1Md_F3 LINE L1 6448 6570 -14 6 908 3776 174 20 13 chrX 42421708 42422390 -124227906 + Lx4A LINE L1 6372 7058 0 6 908 323 231 0 0 chrX 42422596 42422674 -124227622 + (TATATG)n Simple_repeat Simple_repeat 2 79 0 6 908 4020 249 109 24 chrX 42423935 42425226 -124225070 + Lx7 LINE L1 6295 7695 -1 6 908 4908 153 30 9 chrX 42425280 42426158 -124224138 - Lx3A LINE L1 -3 6978 6083 6 908 582 54 0 0 chrX 42426161 42426235 -124224061 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 6 908 14282 162 78 12 chrX 42426264 42431557 -124218739 - L1_Mur1 LINE L1 0 5877 3 6 908 2029 128 51 0 chrX 42431668 42432003 -124218293 - Lx2 LINE L1 -835 6162 5811 6 908 4477 166 57 1 chrX 42432004 42432793 -124217503 + Lx2 LINE L1 6165 6997 0 6 908 825 371 16 23 chrX 42432794 42433279 -124217017 - Lx7 LINE L1 -385 7311 6830 6 908 1651 188 77 7 chrX 42433881 42434174 -124216122 - RMER6A LTR ERVK -4 686 335 6 908 723 52 0 0 chrX 42434174 42434270 -124216026 + (TC)n Simple_repeat Simple_repeat 1 96 0 6 908 1651 191 164 38 chrX 42434270 42434460 -124215836 - RMER6A LTR ERVK -422 334 118 6 908 2360 169 46 29 chrX 42434574 42435034 -124215262 - Lx2B LINE L1 -134 6866 6108 6 908 200 208 0 0 chrX 42435220 42435268 -124215028 + T-rich Low_complexity Low_complexity 1 48 0 6 908 24 0 0 0 chrX 42435286 42435310 -124214986 + AT_rich Low_complexity Low_complexity 1 24 0 6 908 549 0 0 0 chrX 42435310 42435371 -124214925 + (T)n Simple_repeat Simple_repeat 1 61 0 6 908 1136 43 25 6 chrX 42435465 42435627 -124214669 - L1Md_F2 LINE L1 -2 6580 6416 6 908 21 0 0 0 chrX 42435669 42435690 -124214606 + AT_rich Low_complexity Low_complexity 1 21 0 6 908 499 343 54 33 chrX 42435968 42436152 -124214144 + B3A SINE B2 9 196 -2 6 908 24 53 0 0 chrX 42436159 42436197 -124214099 + AT_rich Low_complexity Low_complexity 1 38 0 6 908 6787 53 3 2 chrX 42438218 42439084 -124211212 - L1Md_F2 LINE L1 -21 6561 5728 6 908 618 302 39 19 chrX 42439149 42439355 -124210941 - B3 SINE B2 -2 214 5 6 908 989 191 31 45 chrX 42439358 42439582 -124210714 - URR1A DNA MER1_type -1 225 5 6 908 219 69 0 0 chrX 42439682 42439711 -124210585 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 6 908 22 0 0 0 chrX 42440240 42440262 -124210034 + AT_rich Low_complexity Low_complexity 1 22 0 6 908 531 277 0 47 chrX 42440347 42440495 -124209801 + B1_Mur2 SINE Alu 2 142 -7 6 908 306 106 0 0 chrX 42441134 42441181 -124209115 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 908 21 36 0 0 chrX 42441401 42441429 -124208867 + AT_rich Low_complexity Low_complexity 1 28 0 6 908 38 68 0 0 chrX 42441583 42441656 -124208640 + AT_rich Low_complexity Low_complexity 1 73 0 6 908 22 56 0 0 chrX 42441780 42441816 -124208480 + AT_rich Low_complexity Low_complexity 1 36 0 6 908 23 54 0 0 chrX 42442039 42442076 -124208220 + AT_rich Low_complexity Low_complexity 1 37 0 6 908 711 95 24 8 chrX 42442970 42443097 -124207199 - L1_Mus3 LINE L1 -6 6632 6504 6 908 21 0 0 0 chrX 42443634 42443655 -124206641 + AT_rich Low_complexity Low_complexity 1 21 0 6 908 25 31 0 0 chrX 42446901 42446933 -124203363 + AT_rich Low_complexity Low_complexity 1 32 0 6 908 1835 137 68 0 chrX 42447857 42448149 -124202147 - Lx2B LINE L1 0 7000 6689 6 908 360 0 0 0 chrX 42448837 42448877 -124201419 + (TA)n Simple_repeat Simple_repeat 1 40 0 6 908 259 317 120 37 chrX 42449210 42449318 -124200978 - PB1D10 SINE Alu 0 117 1 6 908 241 252 30 30 chrX 42449345 42449476 -124200820 + (TTATA)n Simple_repeat Simple_repeat 4 134 0 6 908 519 282 122 43 chrX 42449616 42450474 -124199822 - L1MA7 LINE L1 -168 6123 5171 6 908 260 369 16 16 chrX 42450638 42450762 -124199534 + Lx7 LINE L1 6804 6927 -769 6 908 228 217 0 0 chrX 42450998 42451044 -124199252 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 6 908 485 350 24 29 chrX 42451053 42451259 -124199037 + B3 SINE B2 2 206 -10 6 908 312 275 23 74 chrX 42451279 42451495 -124198801 - Lx7 LINE L1 0 7696 7492 6 908 482 0 17 0 chrX 42451498 42451556 -124198740 + (GGAA)n Simple_repeat Simple_repeat 4 62 0 6 908 691 258 201 16 chrX 42452985 42453304 -124196992 - Lx6 LINE L1 -26 7434 7057 6 908 5806 101 25 30 chrX 42453989 42454890 -124195406 - L1_Mus2 LINE L1 -1 6565 5669 6 908 1081 103 0 0 chrX 42454890 42455036 -124195260 + B1_Mm SINE Alu 2 147 0 6 908 32482 43 1 0 chrX 42455037 42459076 -124191220 + L1Md_T LINE L1 1546 5586 -297 6 908 8340 34 3 0 chrX 42459076 42460067 -124190229 + L1Md_T LINE L1 5587 6580 -2 6 908 2498 140 8 2 chrX 42460084 42460478 -124189818 - L1_Mm LINE L1 -200 5683 5288 6 908 236 236 10 92 chrX 42460495 42460593 -124189703 - Lx4B LINE L1 -4 7054 6965 6 908 27863 96 39 4 chrX 42460589 42465466 -124184830 - L1Md_F2 LINE L1 -2 6580 1529 6 113 19497 101 8 1 chrX 42465462 42468313 -124181983 + L1Md_F2 LINE L1 2717 5586 -297 6 909 7084 82 33 0 chrX 42468314 42469277 -124181019 + L1Md_F2 LINE L1 5588 6582 0 6 909 25 0 0 0 chrX 42470496 42470521 -124179775 + AT_rich Low_complexity Low_complexity 1 25 0 6 909 243 0 0 0 chrX 42470933 42470960 -124179336 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 909 4669 53 0 5 chrX 42471213 42471798 -124178498 - L1Md_F2 LINE L1 -14 6568 5987 6 909 6581 56 0 0 chrX 42471798 42472639 -124177657 + L1_Mm LINE L1 3940 4780 -1103 6 909 1207 89 0 27 chrX 42472777 42472961 -124177335 - L1Md_F2 LINE L1 -11 6571 6393 6 909 456 19 0 0 chrX 42474195 42474248 -124176048 + (TA)n Simple_repeat Simple_repeat 2 54 0 6 909 3434 181 93 0 chrX 42474274 42474933 -124175363 - L1_Mur2 LINE L1 -118 5759 5040 6 909 2479 142 56 28 chrX 42474932 42475433 -124174863 + L1_Mur2 LINE L1 4525 5039 -838 6 909 348 24 0 0 chrX 42475441 42475482 -124174814 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 909 1582 62 0 0 chrX 42475486 42475697 -124174599 - L1Md_F2 LINE L1 0 6582 6372 6 909 862 192 38 21 chrX 42476000 42476186 -124174110 + B2_Mm2 SINE B2 1 189 -6 6 909 599 236 14 0 chrX 42476206 42476350 -124173946 + B1_Mus1 SINE Alu 2 147 -1 6 909 212 264 0 14 chrX 42476350 42476423 -124173873 + (CAAA)n Simple_repeat Simple_repeat 1 72 0 6 909 182 339 78 35 chrX 42476609 42476725 -124173571 - MIR SINE MIR -121 141 21 6 909 196 404 0 11 chrX 42477269 42477364 -124172932 + MIR SINE MIR 11 104 -158 6 909 230 369 0 0 chrX 42477570 42477635 -124172661 - RLTR33 LTR ERVK -87 591 527 6 909 229 200 0 0 chrX 42477760 42477805 -124172491 - RLTR19C LTR ERVK -413 93 49 6 909 311 195 23 0 chrX 42478137 42478224 -124172072 - RCHARR1 DNA MER1_type -102 872 784 6 909 539 143 38 45 chrX 42478298 42478430 -124171866 - Lx7 LINE L1 -1 7695 7565 6 909 37 23 0 0 chrX 42478627 42478671 -124171625 + AT_rich Low_complexity Low_complexity 1 44 0 6 909 1355 281 108 16 chrX 42478717 42479144 -124171152 + Lx6 LINE L1 6980 7445 -15 6 909 691 221 0 21 chrX 42479346 42479489 -124170807 - B1_Mus1 SINE Alu -2 146 7 6 909 25 31 0 0 chrX 42479819 42479851 -124170445 + AT_rich Low_complexity Low_complexity 1 32 0 6 909 21 36 0 0 chrX 42480381 42480409 -124169887 + AT_rich Low_complexity Low_complexity 1 28 0 6 909 309 192 0 37 chrX 42480410 42480491 -124169805 - Lx7 LINE L1 0 7696 7619 6 909 319 310 79 43 chrX 42480794 42481074 -124169222 - L1M5 LINE L1 -3111 3035 2746 6 909 538 200 42 113 chrX 42481074 42481339 -124168957 + Lx9 LINE L1 7399 7644 0 6 909 276 213 0 0 chrX 42481395 42481456 -124168840 + (TA)n Simple_repeat Simple_repeat 1 61 0 6 909 248 319 14 0 chrX 42481458 42481527 -124168769 - ID2 SINE ID 0 83 14 6 909 846 155 6 6 chrX 42481967 42482123 -124168173 + L1_Mur2 LINE L1 5147 5302 -575 6 909 6517 155 13 11 chrX 42482116 42482224 -124168072 + L1_Mm LINE L1 4523 4630 -1253 6 909 269 26 26 0 chrX 42482224 42482262 -124168034 + (CAAA)n Simple_repeat Simple_repeat 3 41 0 6 909 6517 155 13 11 chrX 42482262 42482278 -124168018 + L1_Mm LINE L1 4631 4652 -1231 6 909 5696 96 151 14 chrX 42482278 42483187 -124167109 + RLTR13D4 LTR ERVK 1 1033 0 6 909 6517 155 13 11 chrX 42483187 42484206 -124166090 + L1_Mm LINE L1 4653 5669 -214 6 909 200 217 0 0 chrX 42484206 42484252 -124166044 + T-rich Low_complexity Low_complexity 1 46 0 6 909 36396 65 6 7 chrX 42484255 42490414 -124159882 - L1Md_F3 LINE L1 -14 6570 416 6 909 564 243 15 7 chrX 42490837 42490974 -124159322 + Lx8 LINE L1 6385 6522 -951 6 909 714 322 57 10 chrX 42490982 42491283 -124159013 + Lx8 LINE L1 6713 7027 -446 6 909 25 0 0 0 chrX 42491283 42491308 -124158988 + AT_rich Low_complexity Low_complexity 1 25 0 6 909 627 236 34 119 chrX 42491452 42491721 -124158575 - RLTR11B LTR ERVK -135 318 73 6 909 1581 176 32 7 chrX 42491726 42492006 -124158290 + ORR1A4 LTR MaLR 1 287 -42 6 909 1466 209 106 13 chrX 42492016 42492452 -124157844 + ORR1A4-int LTR MaLR 1041 1478 -31 6 909 486 0 0 0 chrX 42492690 42492744 -124157552 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 909 21 0 0 0 chrX 42492825 42492846 -124157450 + AT_rich Low_complexity Low_complexity 1 21 0 6 909 329 376 110 44 chrX 42492944 42493172 -124157124 + MLT1E1A LTR MaLR 437 679 -1 6 909 345 47 0 0 chrX 42493374 42493417 -124156879 + (TC)n Simple_repeat Simple_repeat 1 43 0 6 909 206 62 0 30 chrX 42493417 42493450 -124156846 + (TTCCC)n Simple_repeat Simple_repeat 2 33 0 6 909 2929 81 2 14 chrX 42493703 42494118 -124156178 - L1Md_F2 LINE L1 0 6582 6173 6 909 4394 81 14 0 chrX 42494130 42494721 -124155575 + L1Md_F2 LINE L1 5587 6185 -397 6 909 210 352 33 11 chrX 42494721 42494813 -124155483 - B4A SINE B4 -196 96 3 6 909 1409 283 32 7 chrX 42495598 42496007 -124154289 - MTD LTR MaLR 0 419 1 6 909 210 364 13 0 chrX 42496224 42496301 -124153995 + ID4_ SINE ID 4 81 -2 6 909 333 93 0 0 chrX 42496354 42496397 -124153899 + L1Md_F3 LINE L1 5544 5586 -297 7 909 7823 48 6 3 chrX 42496398 42497374 -124152922 + L1Md_F3 LINE L1 5588 6566 -18 7 909 23 54 0 0 chrX 42497519 42497556 -124152740 + AT_rich Low_complexity Low_complexity 1 37 0 7 909 23 0 0 0 chrX 42497670 42497693 -124152603 + AT_rich Low_complexity Low_complexity 1 23 0 7 909 227 311 0 32 chrX 42497960 42498023 -124152273 - B3 SINE B2 -68 148 88 7 909 279 0 0 0 chrX 42498031 42498062 -124152234 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 909 189 0 0 0 chrX 42498075 42498096 -124152200 + (GA)n Simple_repeat Simple_repeat 2 22 0 7 909 585 314 40 23 chrX 42498224 42498400 -124151896 - B3 SINE B2 -37 179 1 7 909 25 65 0 0 chrX 42498519 42498565 -124151731 + AT_rich Low_complexity Low_complexity 1 46 0 7 909 252 0 0 0 chrX 42499705 42499733 -124150563 + (TA)n Simple_repeat Simple_repeat 2 29 0 7 909 195 42 0 0 chrX 42499734 42499758 -124150538 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 909 448 379 53 60 chrX 42501228 42501509 -124148787 - B4A SINE B4 0 292 14 1 909 385 371 112 4 chrX 42501844 42502104 -124148192 + L2 LINE L2 1116 1403 -2016 2 909 289 323 36 36 chrX 42502135 42502273 -124148023 + L2 LINE L2 2408 2545 -874 2 909 6849 80 13 15 chrX 42502649 42503602 -124146694 + L1Md_F2 LINE L1 5629 6579 -3 3 909 793 160 16 42 chrX 42503762 42503951 -124146345 - Lx3A LINE L1 0 6981 6798 4 909 3320 259 91 12 chrX 42503953 42504884 -124145412 - Lx6 LINE L1 -8 7452 6448 5 909 248 336 23 15 chrX 42505629 42505759 -124144537 + L1MCa LINE L1 30 160 -5885 6 909 266 258 0 0 chrX 42505780 42505842 -124144454 + L1MCa LINE L1 494 555 -6196 6 909 893 241 73 136 chrX 42505842 42506144 -124144152 + MTE2b LTR MaLR 1 283 -96 7 909 547 308 19 47 chrX 42506144 42506464 -124143832 - RodERV21-int LTR ERV1 -3195 3896 3586 8 909 5252 271 52 40 chrX 42506538 42508196 -124142100 - RodERV21-int LTR ERV1 -2224 2767 1090 8 909 345 313 47 45 chrX 42508235 42508574 -124141722 + MER52-int LTR ERV1 4874 5129 -1962 9 909 1632 78 12 47 chrX 42509291 42509547 -124140749 - L1Md_F2 LINE L1 0 6582 6336 1 909 606 346 34 53 chrX 42509676 42510054 -124140242 + RodERV21-int LTR ERV1 2718 3088 -1903 1 909 248 49 49 0 chrX 42510606 42510647 -124139649 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 909 264 182 169 0 chrX 42510824 42510901 -124139395 - Charlie7 DNA MER1_type -623 1989 1900 1 909 195 162 0 0 chrX 42511223 42511260 -124139036 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 909 24 0 0 0 chrX 42511276 42511300 -124138996 + AT_rich Low_complexity Low_complexity 1 24 0 1 909 24 0 0 0 chrX 42511661 42511685 -124138611 + AT_rich Low_complexity Low_complexity 1 24 0 1 909 23 25 0 24 chrX 42511796 42511810 -124138486 + AT_rich Low_complexity Low_complexity 1 14 0 1 909 2651 116 90 33 chrX 42511810 42512265 -124138031 + Lx3_Mus LINE L1 6523 7003 -6 1 909 23 25 0 24 chrX 42512265 42512291 -124138005 + AT_rich Low_complexity Low_complexity 1 26 0 1 909 5807 124 51 6 chrX 42513049 42514259 -124136037 - Lx LINE L1 -3 6651 5361 2 909 848 299 85 25 chrX 42515361 42515715 -124134581 + Lx6 LINE L1 7059 7433 -27 2 909 318 257 48 41 chrX 42515999 42516145 -124134151 + L1MC LINE L1 3752 3898 -2248 2 909 3667 116 46 87 chrX 42516452 42517235 -124133061 - RMER17A LTR ERVK 0 751 1 2 909 549 175 0 0 chrX 42518467 42518570 -124131726 + (TA)n Simple_repeat Simple_repeat 1 103 0 2 909 28 71 0 0 chrX 42518697 42518753 -124131543 + AT_rich Low_complexity Low_complexity 1 56 0 2 909 1605 310 43 60 chrX 42518813 42518879 -124131417 - Lx9 LINE L1 -242 7402 7337 2 909 3098 83 0 24 chrX 42518879 42519301 -124130995 + L1_Mus2 LINE L1 6154 6565 -1 2 909 1605 310 43 60 chrX 42519301 42520028 -124130268 - Lx9 LINE L1 -308 7336 6623 2 909 2156 171 116 43 chrX 42520034 42520499 -124129797 - RMER20A LTR ERVK -15 501 3 2 909 258 264 215 9 chrX 42520503 42520610 -124129686 - Lx9 LINE L1 -1135 6509 6381 2 909 304 264 40 81 chrX 42520622 42520678 -124129618 + ORR1D2 LTR MaLR 88 146 -228 2 909 6366 40 0 0 chrX 42520678 42521435 -124128861 + L1Md_F2 LINE L1 5814 6570 -12 3 909 304 264 40 81 chrX 42521435 42521477 -124128819 + ORR1D2 LTR MaLR 147 182 -192 2 909 348 164 0 0 chrX 42521477 42521544 -124128752 + C-rich Low_complexity Low_complexity 6 72 0 3 909 480 227 37 49 chrX 42521545 42521720 -124128576 + ORR1D2 LTR MaLR 244 421 0 2 909 592 298 142 40 chrX 42521726 42521791 -124128505 + L1_Mur3 LINE L1 5377 5442 -438 3 909 197 33 0 32 chrX 42521791 42521822 -124128474 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 3 909 592 298 142 40 chrX 42521822 42522109 -124128187 + L1_Mur3 LINE L1 5443 5764 -116 3 909 229 325 51 25 chrX 42522253 42522332 -124127964 + B1F SINE Alu 45 125 -24 3 909 384 167 0 0 chrX 42522344 42522440 -124127856 + GA-rich Low_complexity Low_complexity 1 96 0 3 909 594 0 0 0 chrX 42523617 42523683 -124126613 + (TA)n Simple_repeat Simple_repeat 2 67 0 3 909 241 246 0 0 chrX 42523938 42523995 -124126301 + T-rich Low_complexity Low_complexity 2 58 0 3 909 5823 232 49 10 chrX 42524049 42525323 -124124973 - Lx5 LINE L1 -79 6971 5649 3 909 3261 224 24 28 chrX 42525323 42526076 -124124220 + RMER17B LTR ERVK 209 958 0 3 909 1219 187 108 33 chrX 42526076 42526435 -124123861 - Lx5 LINE L1 -330 5556 5231 3 909 680 185 46 0 chrX 42526435 42526586 -124123710 - Lx2 LINE L1 -2 6995 6838 4 909 1012 194 51 167 chrX 42526586 42526645 -124123651 - Lx5 LINE L1 -643 5243 5191 3 909 418 214 0 0 chrX 42526647 42526731 -124123565 - Lx5 LINE L1 -2062 3815 3732 3 909 806 0 0 0 chrX 42526778 42526878 -124123418 - L1Md_A LINE L1 0 6582 6483 4 909 1198 149 45 0 chrX 42526878 42527100 -124123196 - Lx5 LINE L1 -2134 3743 3512 3 909 3911 192 33 25 chrX 42527100 42527863 -124122433 + RMER13A LTR ERVK 1 769 -91 4 909 341 282 26 26 chrX 42527896 42528009 -124122287 - HAL1-2a_MD LINE L1 -574 2450 2338 4 909 2430 176 110 0 chrX 42528012 42528564 -124121732 - Lx5 LINE L1 -2409 3471 2859 3 909 318 114 27 0 chrX 42528563 42528630 -124121666 + L1_Mur2 LINE L1 2465 2539 -1375 4 909 6581 117 45 1 chrX 42528622 42530282 -124120014 + L1_Mus1 LINE L1 4833 6567 0 4 909 2445 205 12 20 chrX 42530285 42530774 -124119522 + RLTR12A LTR ERVK 80 564 -4 4 909 6569 207 38 4 chrX 42530774 42531549 -124118747 - Lx5 LINE L1 -3034 2843 2058 3 909 308 94 0 19 chrX 42531549 42531603 -124118693 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 909 6569 221 41 11 chrX 42531603 42532707 -124117589 - Lx5 LINE L1 -3820 2057 904 3 909 841 81 93 13 chrX 42533979 42534107 -124116189 + L1Md_F2 LINE L1 6419 6559 -23 4 909 324 0 0 0 chrX 42534107 42534143 -124116153 + (TAA)n Simple_repeat Simple_repeat 1 36 0 4 909 841 81 93 13 chrX 42534143 42534164 -124116132 + L1Md_F2 LINE L1 6560 6580 -2 4 909 3399 122 24 0 chrX 42534758 42535249 -124115047 - L1_Mus3 LINE L1 -155 6483 5981 5 909 1210 93 16 0 chrX 42535251 42535434 -124114862 + L1_Mus3 LINE L1 6447 6632 -6 5 909 3624 165 23 2 chrX 42535471 42536089 -124114207 - Lx2B LINE L1 -29 6971 6341 5 909 7356 85 5 0 chrX 42536268 42537453 -124112843 - L1_Mus1 LINE L1 0 6567 5377 5 909 2916 208 81 5 chrX 42537452 42538322 -124111974 + Lx6 LINE L1 5192 6126 -1334 5 909 1198 192 9 0 chrX 42538454 42538673 -124111623 - URR1B DNA MER1_type 0 225 5 5 909 24 0 0 0 chrX 42538789 42538813 -124111483 + AT_rich Low_complexity Low_complexity 1 24 0 5 909 517 288 29 0 chrX 42538972 42539111 -124111185 + B1_Mus2 SINE Alu 3 145 -2 5 909 22655 60 2 4 chrX 42540310 42544006 -124106290 - L1Md_F3 LINE L1 -1 6583 2898 5 909 1210 176 116 161 chrX 42544419 42544860 -124105436 + MTC LTR MaLR 1 421 0 5 909 587 324 101 42 chrX 42545607 42546204 -124104092 - Lx8 LINE L1 -1297 6176 5528 5 909 17416 23 1 1 chrX 42547704 42550428 -124099868 - L1Md_T LINE L1 0 6582 3859 6 909 14617 29 1 0 chrX 42550427 42552194 -124098102 + L1Md_T LINE L1 2091 3859 -2024 6 909 503 255 33 113 chrX 42552558 42552770 -124097526 - B3 SINE B2 0 195 1 6 909 2768 79 34 3 chrX 42554438 42554819 -124095477 + L1_Mus2 LINE L1 6173 6565 -1 6 909 357 322 23 0 chrX 42555370 42555457 -124094839 - MTEa LTR MaLR -239 140 52 6 909 370 208 56 40 chrX 42555473 42555598 -124094698 + Lx2 LINE L1 5632 5758 -1239 6 909 317 183 150 0 chrX 42555933 42555993 -124094303 - Lx8 LINE L1 -141 7332 7264 6 909 591 247 59 41 chrX 42556204 42556474 -124093822 - L1M4 LINE L1 -3665 2481 2207 6 909 6763 122 4 8 chrX 42556755 42558498 -124091798 - Lx LINE L1 -20 6634 4897 6 909 7521 62 3 1 chrX 42558768 42560092 -124090204 - L1Md_F3 LINE L1 -14 6570 5245 6 909 2947 78 2 16 chrX 42560092 42560187 -124090109 + L1_Mm LINE L1 4891 4985 -898 6 909 2810 63 0 40 chrX 42560187 42560567 -124089729 + RLTR10B2 LTR ERVK 1 365 0 7 909 2947 78 2 16 chrX 42560567 42560901 -124089395 + L1_Mm LINE L1 4986 5314 -569 6 909 368 298 23 62 chrX 42560920 42561049 -124089247 + RMER15 LTR ERVL 38 161 -414 7 909 1004 287 36 43 chrX 42561184 42561636 -124088660 - Lx9 LINE L1 -1594 6050 5559 7 909 1000 282 44 17 chrX 42561636 42561996 -124088300 - ORR1D1 LTR MaLR 0 374 5 7 909 1004 272 25 41 chrX 42561996 42562106 -124088190 - Lx9 LINE L1 -550 5621 5473 7 909 640 342 54 24 chrX 42562249 42562659 -124087637 - Lx7 LINE L1 -104 7369 6948 7 909 1907 288 75 37 chrX 42562932 42564154 -124086142 - Lx7 LINE L1 -1783 5913 4631 7 909 14147 118 6 13 chrX 42564143 42565547 -124084749 - L1_Mus3 LINE L1 0 6638 5235 7 909 849 20 0 0 chrX 42565547 42565646 -124084650 + (TA)n Simple_repeat Simple_repeat 2 100 0 7 909 14147 149 20 17 chrX 42565646 42567160 -124083136 - L1_Mus3 LINE L1 -649 5234 3724 7 909 1595 26 0 45 chrX 42567160 42567358 -124082938 - B2_Mm1t SINE B2 -3 190 2 7 909 14147 149 20 17 chrX 42567358 42567923 -124082373 - L1_Mus3 LINE L1 -2160 3723 3150 7 909 29507 88 12 2 chrX 42567946 42573057 -124077239 - L1Md_F2 LINE L1 -7 6575 1419 7 909 1391 290 16 27 chrX 42573057 42573358 -124076938 + MuRRS4-int LTR ERV1 3844 4142 -921 7 909 275 45 0 43 chrX 42573358 42573404 -124076892 + (CAA)n Simple_repeat Simple_repeat 2 45 0 8 909 1391 290 16 27 chrX 42573404 42573542 -124076754 + MuRRS4-int LTR ERV1 4143 4278 -785 7 909 268 95 0 0 chrX 42573783 42573825 -124076471 + RLTR6-int LTR ERV1 7737 7778 0 8 909 3923 71 20 2 chrX 42573825 42574335 -124075961 + MURVY-LTR LTR ERV1 1 519 0 8 909 802 75 0 0 chrX 42574335 42574442 -124075854 - L1Md_F3 LINE L1 -451 6133 6027 8 909 754 119 7 56 chrX 42574449 42574591 -124075705 - RLTR13D6 LTR ERVK -156 746 612 8 909 600 47 0 0 chrX 42574593 42574679 -124075617 + L1Md_F2 LINE L1 6495 6580 -2 8 909 207 88 29 0 chrX 42574733 42574767 -124075529 + (CATTT)n Simple_repeat Simple_repeat 1 35 0 8 909 2735 66 0 0 chrX 42574834 42575166 -124075130 - IAPEY3_LTR LTR ERVK 0 332 1 8 909 24 32 0 0 chrX 42576963 42576994 -124073302 + AT_rich Low_complexity Low_complexity 1 31 0 8 909 1051 305 105 2 chrX 42577215 42577662 -124072634 - Lx5 LINE L1 -723 6327 5835 8 909 3537 199 100 14 chrX 42577945 42578726 -124071570 + L1_Mur3 LINE L1 4486 5318 -562 8 909 729 63 0 0 chrX 42578726 42578821 -124071475 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 9 909 3537 199 100 14 chrX 42578821 42579066 -124071230 + L1_Mur3 LINE L1 5319 5601 -279 8 909 625 300 132 14 chrX 42579066 42579279 -124071017 - MTB LTR MaLR 0 400 163 9 909 361 181 24 0 chrX 42579343 42579426 -124070870 - Lx7 LINE L1 -1793 5903 5819 9 909 1123 76 0 0 chrX 42579477 42579622 -124070674 - B1_Mm SINE Alu -1 146 2 9 909 2363 193 20 37 chrX 42579648 42580310 -124069986 - L1VL2 LINE L1 -5386 949 20 9 909 6547 187 40 12 chrX 42580314 42581780 -124068516 + Lx2 LINE L1 5493 6997 0 9 909 33525 45 1 3 chrX 42582482 42587729 -124062567 + L1Md_T LINE L1 262 5589 -297 9 909 8393 30 7 0 chrX 42587729 42588717 -124061579 + L1Md_T LINE L1 5590 6584 -1 9 909 585 337 58 29 chrX 42588730 42589039 -124061257 + Lx8 LINE L1 6211 6528 -945 9 909 2949 61 200 9 chrX 42589070 42589500 -124060796 - RLTR1B LTR ERV1 0 512 1 9 909 63114 23 1 2 chrX 42589500 42597048 -124053248 - MMERGLN-int LTR ERV1 0 7556 16 9 909 304 314 8 55 chrX 42597048 42597063 -124053233 + Lx8 LINE L1 7242 7254 -219 9 909 2916 66 200 9 chrX 42597063 42597493 -124052803 - RLTR1B LTR ERV1 0 512 1 9 909 304 314 8 55 chrX 42597493 42597605 -124052691 + Lx8 LINE L1 7255 7363 -110 9 909 26 0 0 0 chrX 42597610 42597636 -124052660 + AT_rich Low_complexity Low_complexity 1 26 0 1 909 455 181 10 41 chrX 42597667 42597765 -124052531 + RLTR14 LTR ERV1 12 106 -276 1 909 727 314 25 74 chrX 42597792 42598115 -124052181 + RLTR14 LTR ERV1 76 382 0 1 909 22 0 0 0 chrX 42598120 42598142 -124052154 + AT_rich Low_complexity Low_complexity 1 22 0 1 113 365 274 35 9 chrX 42598350 42598464 -124051832 + RMER1B Other Other 598 714 -352 1 910 712 222 105 6 chrX 42598977 42599158 -124051138 + RMER1C Other Other 45 243 -1099 1 910 360 0 0 0 chrX 42599159 42599199 -124051097 + (A)n Simple_repeat Simple_repeat 1 40 0 1 910 231 36 0 0 chrX 42599477 42599505 -124050791 + (T)n Simple_repeat Simple_repeat 1 28 0 1 910 2581 256 94 24 chrX 42599532 42600394 -124049902 + RMER1C Other Other 420 1341 -1 1 910 300 263 61 49 chrX 42600674 42600838 -124049458 - MamRep605 Unknown Unknown -648 228 63 1 910 1637 193 87 15 chrX 42602261 42602600 -124047696 - L1_Mur2 LINE L1 -247 5630 5264 1 910 240 59 0 0 chrX 42602600 42602634 -124047662 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 910 1637 193 87 15 chrX 42602634 42602683 -124047613 - L1_Mur2 LINE L1 -614 5263 5215 1 910 353 324 108 21 chrX 42602760 42602946 -124047350 + B3 SINE B2 4 205 -11 1 910 386 243 108 27 chrX 42603135 42603283 -124047013 - Lx8 LINE L1 -96 7377 7218 1 910 293 219 0 9 chrX 42603956 42604071 -124046225 + GA-rich Low_complexity Low_complexity 2 115 0 1 910 1512 225 85 49 chrX 42604084 42604533 -124045763 - Lx7 LINE L1 -282 7414 6950 1 910 22 56 0 0 chrX 42604968 42605004 -124045292 + AT_rich Low_complexity Low_complexity 1 36 0 1 910 297 208 0 0 chrX 42605444 42605516 -124044780 + (TA)n Simple_repeat Simple_repeat 2 73 0 1 910 538 352 52 58 chrX 42605846 42606209 -124044087 - Lx8 LINE L1 -144 7329 6956 1 910 11004 14 1 1 chrX 42606246 42607584 -124042712 + L1Md_A LINE L1 7 1344 -5380 1 910 10343 4 0 0 chrX 42610666 42611824 -124038472 + L1Md_A LINE L1 4429 5586 -297 1 910 8935 7 0 0 chrX 42611824 42612820 -124037476 + L1Md_A LINE L1 5587 6582 0 1 910 295 269 45 18 chrX 42612945 42613055 -124037241 - RMER15-int LTR ERVL -3369 1630 1518 1 910 276 267 14 58 chrX 42613099 42613238 -124037058 - L1MEg LINE L1 -4680 1404 1272 1 910 233 234 0 15 chrX 42613305 42613370 -124036926 - L1M2 LINE L1 -4501 2348 2285 1 910 316 338 59 0 chrX 42613568 42613704 -124036592 - RMER15-int LTR ERVL -3749 1250 1107 1 910 180 312 52 0 chrX 42614029 42614106 -124036190 - MIRb SINE MIR -57 211 131 1 910 5839 64 1 1 chrX 42614151 42614905 -124035391 + L1Md_F2 LINE L1 5828 6581 -1 1 910 243 341 38 121 chrX 42615602 42615634 -124034662 + B1F SINE Alu 6 36 -113 1 910 575 191 31 8 chrX 42615634 42615761 -124034535 + Lx2 LINE L1 6868 6997 0 1 910 243 341 38 121 chrX 42615761 42615885 -124034411 + B1F SINE Alu 37 149 0 1 910 299 311 66 0 chrX 42617588 42617710 -124032586 - Lx8 LINE L1 -74 7399 7270 1 910 2081 135 33 0 chrX 42618134 42618468 -124031828 + Lx2 LINE L1 6652 6996 -1 1 910 221 155 28 0 chrX 42618805 42618876 -124031420 + (TAAA)n Simple_repeat Simple_repeat 4 76 0 1 910 24 0 0 0 chrX 42619141 42619165 -124031131 + AT_rich Low_complexity Low_complexity 1 24 0 1 910 585 0 0 0 chrX 42619801 42619866 -124030430 + (TTTC)n Simple_repeat Simple_repeat 1 65 0 1 910 351 330 85 0 chrX 42620537 42620643 -124029653 + MER5A DNA MER1_type 65 179 -10 1 910 27 0 0 0 chrX 42620881 42620908 -124029388 + AT_rich Low_complexity Low_complexity 1 27 0 1 910 317 325 69 102 chrX 42620974 42621190 -124029106 - MLT1A1 LTR MaLR -143 265 57 1 910 756 283 36 81 chrX 42621194 42621494 -124028802 - MTE2a LTR MaLR 0 419 108 1 910 35 24 0 0 chrX 42621539 42621581 -124028715 + AT_rich Low_complexity Low_complexity 1 42 0 1 910 691 331 0 0 chrX 42621939 42622114 -124028182 + B4A SINE B4 1 175 -117 1 910 227 294 38 105 chrX 42622029 42622162 -124028134 + B1_Mur2 SINE Alu 9 132 -17 1 910 803 44 0 9 chrX 42622573 42622688 -124027608 - L1Md_F3 LINE L1 -14 6570 6457 1 910 364 299 118 30 chrX 42622688 42623071 -124027225 - Lx9 LINE L1 -846 6798 6236 1 910 1882 227 12 15 chrX 42623253 42623714 -124026582 + Lx7 LINE L1 5461 5923 -1773 1 910 1754 169 10 0 chrX 42623716 42624017 -124026279 - MT2B LTR ERVL 0 601 298 1 910 1275 296 30 20 chrX 42624026 42624467 -124025829 + Lx7 LINE L1 6389 6833 -863 1 910 7639 107 15 8 chrX 42624598 42625770 -124024526 - L1_Mur1 LINE L1 -2693 3193 2013 1 910 8295 122 21 15 chrX 42625768 42627080 -124023216 + Lx3_Mus LINE L1 5669 6988 -21 1 910 414 0 0 0 chrX 42627080 42627126 -124023170 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 1 910 21 71 0 0 chrX 42627458 42627500 -124022796 + AT_rich Low_complexity Low_complexity 1 42 0 1 910 255 225 0 0 chrX 42627827 42627898 -124022398 + (CATATA)n Simple_repeat Simple_repeat 5 75 0 1 910 227 299 0 43 chrX 42627898 42627916 -124022380 + (TG)n Simple_repeat Simple_repeat 1 17 0 1 910 468 0 0 0 chrX 42627916 42627968 -124022328 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 910 2949 98 2 0 chrX 42627968 42628385 -124021911 - BGLII LTR ERVK -3 418 1 1 910 227 299 0 43 chrX 42628385 42628435 -124021861 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 910 26 30 0 0 chrX 42629077 42629110 -124021186 + AT_rich Low_complexity Low_complexity 1 33 0 1 910 416 296 68 0 chrX 42629270 42629402 -124020894 - ID_B1 SINE B4 0 224 84 1 910 285 338 66 40 chrX 42630029 42630180 -124020116 + Lx8 LINE L1 7085 7239 -234 1 910 322 320 0 30 chrX 42630577 42630677 -124019619 + PB1D10 SINE Alu 21 117 0 1 910 387 220 43 11 chrX 42631033 42631125 -124019171 - ID_B1 SINE B4 0 224 130 1 910 186 43 0 0 chrX 42631621 42631644 -124018652 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 910 283 337 19 15 chrX 42632003 42632171 -124018125 - Lx7 LINE L1 -384 7089 6923 1 910 1224 211 166 26 chrX 42632235 42632585 -124017711 + RMER6B LTR ERVK 63 461 0 1 910 1730 213 16 45 chrX 42632587 42632975 -124017321 + MYSERV6-int LTR ERVK 3 380 -8579 1 910 1180 98 65 11 chrX 42632975 42633160 -124017136 + B2_Mm2 SINE B2 1 195 0 1 910 1730 213 16 45 chrX 42633160 42633213 -124017083 + MYSERV6-int LTR ERVK 381 431 -8528 1 910 547 183 104 0 chrX 42633208 42633323 -124016973 + MYSERV6-int LTR ERVK 361 487 -8472 1 910 3887 88 2 6 chrX 42633323 42633861 -124016435 + L1Md_F2 LINE L1 6017 6552 -30 1 910 378 0 0 0 chrX 42633861 42633903 -124016393 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 910 3784 147 42 5 chrX 42633963 42634611 -124015685 + MYSERV6-int LTR ERVK 485 1156 -7803 1 910 6002 105 19 6 chrX 42634611 42636101 -124014195 - L1VL2 LINE L1 -2040 1575 64 1 910 293 274 57 0 chrX 42636116 42636222 -124014074 + Ricksha_c DNA MuDR 342 453 -1595 1 910 26 64 0 0 chrX 42636527 42636574 -124013722 + AT_rich Low_complexity Low_complexity 1 47 0 1 910 22 0 0 0 chrX 42637001 42637023 -124013273 + AT_rich Low_complexity Low_complexity 1 22 0 1 910 455 331 79 13 chrX 42637028 42637331 -124012965 + MER34A1 LTR ERV1 196 518 -69 1 910 500 143 24 0 chrX 42638582 42638666 -124011630 + RMER6C LTR ERVK 3 88 -602 1 910 6186 117 13 0 chrX 42638666 42639622 -124010674 - L1VL4 LINE L1 -2536 1023 53 1 910 1269 199 8 131 chrX 42639622 42639980 -124010316 + RMER6C LTR ERVK 25 338 -352 1 910 352 262 29 58 chrX 42640007 42640181 -124010115 + Lx4B LINE L1 6884 7052 -6 1 910 1416 203 45 65 chrX 42640181 42640582 -124009714 + RMER6C LTR ERVK 298 690 0 1 910 2863 109 45 11 chrX 42640801 42641272 -124009024 + RMER17A LTR ERVK 1 487 -264 1 910 789 330 11 25 chrX 42641508 42641872 -124008424 - Lx9 LINE L1 -663 6981 6623 1 910 246 113 0 70 chrX 42642583 42642602 -124007694 - Lx3A LINE L1 0 6981 6966 1 910 354 98 0 0 chrX 42642602 42642653 -124007643 + (CTTA)n Simple_repeat Simple_repeat 4 54 0 1 910 246 113 0 70 chrX 42642653 42642690 -124007606 - Lx3A LINE L1 -16 6965 6929 1 910 9327 108 28 27 chrX 42642753 42644418 -124005878 + L1_Mus2 LINE L1 4344 6018 -548 1 910 2308 105 26 29 chrX 42644419 42644800 -124005496 + L1_Mus2 LINE L1 6185 6564 -2 1 910 275 0 29 0 chrX 42644810 42644845 -124005451 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 910 251 89 67 0 chrX 42645114 42645159 -124005137 + (CAAAG)n Simple_repeat Simple_repeat 2 49 0 1 910 681 134 0 0 chrX 42645367 42645479 -124004817 + (TAAA)n Simple_repeat Simple_repeat 2 113 0 1 910 403 208 340 0 chrX 42645680 42645786 -124004510 + B1_Mur4 SINE Alu 3 144 -6 1 910 933 288 136 24 chrX 42645847 42646647 -124003649 + L1MD LINE L1 2797 3686 -2460 1 910 489 354 1 9 chrX 42646663 42646892 -124003404 + Lx9 LINE L1 6906 7264 -380 1 910 743 122 0 9 chrX 42646898 42647014 -124003282 - URR1B DNA MER1_type -10 215 101 1 910 469 316 0 0 chrX 42647281 42647398 -124002898 + RSINE1 SINE B4 13 129 -36 1 910 635 138 7 0 chrX 42647418 42647556 -124002740 + (GA)n Simple_repeat Simple_repeat 2 140 0 1 910 3049 153 13 29 chrX 42647570 42648115 -124002181 + Lx LINE L1 6117 6652 -2 1 910 224 139 73 65 chrX 42648129 42648252 -124002044 + (TTAAA)n Simple_repeat Simple_repeat 1 124 0 1 910 47 61 0 0 chrX 42648263 42648345 -124001951 + AT_rich Low_complexity Low_complexity 1 82 0 1 910 552 223 16 0 chrX 42648346 42648467 -124001829 + Lx5 LINE L1 6274 6396 -654 1 910 1314 192 32 27 chrX 42648467 42648744 -124001552 + MTB LTR MaLR 1 279 -100 1 910 914 81 0 0 chrX 42648744 42648867 -124001429 - L1Md_F2 LINE L1 -506 5377 5255 1 910 922 68 0 0 chrX 42648866 42648983 -124001313 + L1Md_F2 LINE L1 5468 5584 -299 1 910 7859 54 3 0 chrX 42648983 42649969 -124000327 + L1Md_F2 LINE L1 5594 6582 0 1 910 5674 129 3 1 chrX 42649983 42650846 -123999450 - L1_Mm LINE L1 -31 5852 4988 1 910 3261 88 7 2 chrX 42650846 42651301 -123998995 + L1_Mus3 LINE L1 6181 6637 -1 1 910 213 108 0 0 chrX 42651348 42651385 -123998911 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 910 1400 90 5 5 chrX 42651388 42651589 -123998707 + MTB LTR MaLR 182 382 -18 1 910 338 130 37 0 chrX 42651594 42651648 -123998648 + MTB-int LTR MaLR 1 56 -1042 1 910 2673 176 81 79 chrX 42651644 42652535 -123997761 + MTB-int LTR MaLR 356 1535 -428 1 910 748 171 13 7 chrX 42652535 42652688 -123997608 + Lx3A LINE L1 6818 6971 -10 1 910 2494 197 92 167 chrX 42652688 42652772 -123997524 + MTB-int LTR MaLR 1186 1258 0 1 910 2660 128 0 10 chrX 42652772 42653176 -123997120 + MTB LTR MaLR 1 400 0 1 910 2655 222 58 27 chrX 42653176 42653505 -123996791 + Lx5 LINE L1 6392 6724 -326 1 910 566 28 14 0 chrX 42653505 42653577 -123996719 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 910 2655 222 58 27 chrX 42653577 42653881 -123996415 + Lx5 LINE L1 6725 7044 -6 1 910 205 152 0 0 chrX 42655837 42655870 -123994426 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 910 1859 149 0 18 chrX 42656032 42656360 -123993936 + L1_Mus3 LINE L1 4936 5257 -626 1 910 6061 114 27 4 chrX 42656328 42657261 -123993035 + L1_Mus3 LINE L1 5685 6638 0 1 910 213 132 0 0 chrX 42657342 42657380 -123992916 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 1 910 376 101 33 22 chrX 42657859 42657950 -123992346 + (TA)n Simple_repeat Simple_repeat 1 92 0 1 910 232 222 48 0 chrX 42658058 42658121 -123992175 + L1Md_F LINE L1 467 532 -5987 2 910 20747 102 18 4 chrX 42658118 42661218 -123989078 + L1Md_F2 LINE L1 306 3458 -2425 2 910 847 53 15 8 chrX 42661218 42661350 -123988946 + L1Md_F3 LINE L1 6452 6584 0 2 910 20747 90 2 6 chrX 42661350 42662100 -123988196 + L1Md_F2 LINE L1 3459 4196 -1687 2 910 414 0 0 0 chrX 42662100 42662146 -123988150 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 910 1647 41 0 168 chrX 42662152 42662443 -123987853 + L1Md_F2 LINE L1 5344 5585 -298 2 910 7134 87 9 3 chrX 42662444 42663421 -123986875 + L1Md_F2 LINE L1 5587 6569 -13 2 910 531 78 0 0 chrX 42664045 42664122 -123986174 + (TC)n Simple_repeat Simple_repeat 2 78 0 2 910 489 17 0 0 chrX 42664129 42664187 -123986109 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 910 242 243 54 45 chrX 42664301 42664413 -123985883 + L1MC4 LINE L1 6639 6751 -1291 2 910 21 0 0 0 chrX 42664715 42664736 -123985560 + AT_rich Low_complexity Low_complexity 1 21 0 2 910 326 75 75 0 chrX 42664804 42664897 -123985399 + (TA)n Simple_repeat Simple_repeat 2 101 0 2 910 430 265 27 11 chrX 42666169 42666355 -123983941 + L1MA5A LINE L1 5750 5935 -356 2 910 7316 172 35 51 chrX 42666947 42668832 -123981464 - Lx4A LINE L1 -9 7049 5187 2 910 3426 138 28 92 chrX 42668832 42669132 -123981164 - Lx4A LINE L1 -3935 1942 1649 2 910 1072 95 0 13 chrX 42669132 42669146 -123981150 - B1_Mus1 SINE Alu 0 148 137 2 910 255 31 0 0 chrX 42669146 42669178 -123981118 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 910 1072 95 0 13 chrX 42669178 42669313 -123980983 - B1_Mus1 SINE Alu -12 136 2 2 910 3783 153 28 62 chrX 42669313 42670407 -123979889 - Lx4A LINE L1 -4229 1648 612 2 910 3043 79 0 15 chrX 42670543 42670953 -123979343 - MTB_Mm LTR MaLR -1 406 3 2 910 545 352 11 22 chrX 42671417 42671600 -123978696 + B3 SINE B2 2 182 -34 2 910 299 276 82 0 chrX 42671600 42671698 -123978598 + Lx9 LINE L1 7149 7254 -390 2 910 2254 222 30 26 chrX 42671750 42672278 -123978018 - RLTR20B3 LTR ERVK -43 534 5 2 910 557 263 15 0 chrX 42672279 42672416 -123977880 + Lx9 LINE L1 7313 7451 -193 2 910 227 230 67 22 chrX 42672457 42672546 -123977750 + Lx9 LINE L1 7543 7635 -9 2 910 595 203 235 94 chrX 42672858 42673189 -123977107 + RLTR20C LTR ERVK 1 478 -100 2 910 288 0 0 0 chrX 42673189 42673221 -123977075 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 910 267 259 23 182 chrX 42673221 42673261 -123977035 + RLTR20C LTR ERVK 479 520 -58 2 910 489 302 142 22 chrX 42673739 42674406 -123975890 + L1M2 LINE L1 2975 3721 -2422 2 910 909 310 29 4 chrX 42674408 42674651 -123975645 - MTEa LTR MaLR -4 375 127 2 910 313 250 9 9 chrX 42674969 42675082 -123975214 - Lx9 LINE L1 -7 7637 7525 2 910 746 205 30 6 chrX 42675113 42675280 -123975016 - Lx9 LINE L1 -219 7425 7255 2 910 337 367 28 35 chrX 42675307 42675451 -123974845 - RSINE1 SINE B4 -17 148 6 2 910 2680 137 12 48 chrX 42675568 42676067 -123974229 + Lx LINE L1 6173 6653 -1 2 910 414 372 59 21 chrX 42676147 42676383 -123973913 + LTR16A LTR ERVL 203 447 -4 2 910 549 55 0 0 chrX 42676707 42676780 -123973516 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 910 232 167 0 0 chrX 42676842 42676890 -123973406 + A-rich Low_complexity Low_complexity 1 48 0 2 910 24 0 0 0 chrX 42677453 42677477 -123972819 + AT_rich Low_complexity Low_complexity 1 24 0 2 910 850 212 107 9 chrX 42677900 42678133 -123972163 - Lx2A1 LINE L1 -86 6922 6667 2 910 3217 59 0 2 chrX 42678190 42678595 -123971701 - L1Md_F2 LINE L1 -12 6570 6167 2 910 1315 103 5 0 chrX 42678598 42678792 -123971504 - L1_Mus1 LINE L1 -1 6566 6372 2 910 627 69 137 10 chrX 42678792 42678894 -123971402 + L1Md_F3 LINE L1 5763 5877 -707 2 910 308 342 0 79 chrX 42679044 42679171 -123971125 + RSINE1 SINE B4 49 165 0 2 910 192 125 0 0 chrX 42679188 42679220 -123971076 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 2 910 272 283 93 58 chrX 42679991 42680375 -123969921 - L1MC LINE L1 -687 5657 5258 2 910 32 57 0 0 chrX 42680419 42680472 -123969824 + AT_rich Low_complexity Low_complexity 1 53 0 2 910 22 35 0 0 chrX 42680586 42680615 -123969681 + AT_rich Low_complexity Low_complexity 1 29 0 2 910 428 321 46 25 chrX 42680853 42681134 -123969162 - L1MC LINE L1 -1339 4807 4521 2 910 31 44 0 0 chrX 42683021 42683066 -123967230 + AT_rich Low_complexity Low_complexity 1 45 0 2 910 21 0 0 0 chrX 42683319 42683340 -123966956 + AT_rich Low_complexity Low_complexity 1 21 0 2 910 192 125 0 0 chrX 42683488 42683520 -123966776 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2 910 43 76 0 0 chrX 42683610 42683702 -123966594 + AT_rich Low_complexity Low_complexity 1 92 0 2 910 441 54 0 0 chrX 42683716 42683772 -123966524 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 910 2114 99 13 6 chrX 42683885 42684200 -123966096 - Lx3_Mus LINE L1 -9 7000 6684 2 910 762 68 33 126 chrX 42684325 42684476 -123965820 + L1_Mus2 LINE L1 6429 6565 -1 2 910 24 0 0 0 chrX 42685137 42685161 -123965135 + AT_rich Low_complexity Low_complexity 1 24 0 2 910 298 134 15 15 chrX 42685271 42685339 -123964957 + CT-rich Low_complexity Low_complexity 6 73 0 2 910 252 86 0 0 chrX 42685522 42685557 -123964739 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 910 6943 96 18 6 chrX 42685601 42686851 -123963445 + L1_Mus2 LINE L1 5307 6565 -1 2 910 2854 203 102 8 chrX 42687165 42687785 -123962511 - RLTR33 LTR ERVK 0 678 1 2 910 816 210 36 27 chrX 42688047 42688267 -123962029 + Lx9 LINE L1 5277 5498 -349 2 910 395 286 64 61 chrX 42688263 42688591 -123961705 + Lx9 LINE L1 5934 6262 -1382 2 910 566 306 0 74 chrX 42688616 42688845 -123961451 + Lx9 LINE L1 6452 6663 -981 2 910 275 128 0 0 chrX 42688857 42688896 -123961400 - RLTR23 LTR ERV1 -2 428 390 2 910 892 280 17 0 chrX 42688937 42689173 -123961123 + Lx9 LINE L1 6673 6912 -732 2 910 348 64 0 0 chrX 42689230 42689277 -123961019 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 910 348 301 54 34 chrX 42689306 42689454 -123960842 - RMER10B LTR ERVL 0 398 248 2 910 523 303 0 0 chrX 42690337 42690489 -123959807 - MER52-int LTR ERV1 -1955 5136 4985 2 910 487 329 23 50 chrX 42691481 42691823 -123958473 - MER52-int LTR ERV1 -3122 3969 3637 2 910 648 70 0 0 chrX 42692921 42693007 -123957289 + (TA)n Simple_repeat Simple_repeat 2 87 0 2 910 312 321 9 0 chrX 42693974 42694083 -123956213 - RodERV21-int LTR ERV1 -4061 930 821 2 910 427 227 49 83 chrX 42694575 42694719 -123955577 - RMER10B LTR ERVL 0 398 260 2 910 232 275 38 51 chrX 42694957 42695114 -123955182 + Lx9 LINE L1 7490 7644 0 2 910 186 71 0 0 chrX 42695282 42695310 -123954986 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 910 1284 188 122 120 chrX 42695356 42695651 -123954645 + ORR1A4 LTR MaLR 1 336 -58 2 910 1624 104 4 36 chrX 42695651 42695901 -123954395 + L1_Mus2 LINE L1 6324 6565 -1 2 910 1277 188 122 120 chrX 42695901 42695998 -123954298 + ORR1A4 LTR MaLR 337 394 0 2 910 423 0 0 0 chrX 42696498 42696545 -123953751 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 910 22 111 0 0 chrX 42697449 42697548 -123952748 + AT_rich Low_complexity Low_complexity 1 99 0 2 910 468 0 0 0 chrX 42697773 42697825 -123952471 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 910 214 256 21 32 chrX 42698124 42698217 -123952079 + T-rich Low_complexity Low_complexity 3 94 0 2 910 409 230 80 22 chrX 42698688 42698826 -123951470 - Lx9 LINE L1 -168 7476 7331 2 910 345 159 0 0 chrX 42698998 42699061 -123951235 + (TATATG)n Simple_repeat Simple_repeat 1 63 0 2 910 912 212 17 6 chrX 42699264 42699444 -123950852 + Lx9 LINE L1 6469 6650 -994 2 910 446 323 24 18 chrX 42699819 42699989 -123950307 + Lx8 LINE L1 7099 7269 -204 2 910 222 164 0 0 chrX 42700395 42700450 -123949846 + A-rich Low_complexity Low_complexity 1 55 0 2 910 266 236 140 0 chrX 42700600 42700703 -123949593 - Lx7 LINE L1 -484 5816 5702 2 910 783 342 26 38 chrX 42700705 42701051 -123949245 - MTD LTR MaLR -77 342 1 2 910 6087 166 8 45 chrX 42701149 42702321 -123947975 - Lx2 LINE L1 -223 6774 5646 2 910 1553 169 42 0 chrX 42702327 42702634 -123947662 - Lx2 LINE L1 -552 5325 5006 2 910 283 281 105 0 chrX 42702659 42702830 -123947466 - Lx2 LINE L1 -1463 4417 4229 2 910 454 281 87 33 chrX 42702964 42703321 -123946975 + Lx9 LINE L1 5770 6156 -1540 2 910 2850 308 51 22 chrX 42703424 42704470 -123945826 + Lx8 LINE L1 6317 7392 -81 2 910 26 0 0 0 chrX 42704590 42704616 -123945680 + AT_rich Low_complexity Low_complexity 1 26 0 2 910 1332 57 0 0 chrX 42704739 42704964 -123945332 - L1Md_F2 LINE L1 0 6582 6400 2 910 231 189 54 0 chrX 42704964 42704987 -123945309 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 2 910 1090 103 0 0 chrX 42704989 42705135 -123945161 - B1_Mus1 SINE Alu -2 146 1 2 910 498 340 63 39 chrX 42705516 42705770 -123944526 + MTE2a LTR MaLR 120 379 0 2 910 239 363 17 34 chrX 42705899 42706016 -123944280 - PB1D10 SINE Alu 0 117 3 2 910 23 0 0 0 chrX 42706457 42706480 -123943816 + AT_rich Low_complexity Low_complexity 1 23 0 2 910 214 29 57 0 chrX 42707408 42707443 -123942853 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 910 364 393 57 41 chrX 42707539 42707937 -123942359 - MLT1E3 LTR MaLR 0 627 213 2 910 1433 82 0 10 chrX 42708170 42708366 -123941930 - B2_Mm2 SINE B2 0 195 2 2 910 394 370 21 83 chrX 42708601 42709082 -123941214 - L1M4 LINE L1 -5368 1174 724 2 910 385 290 30 0 chrX 42709929 42710060 -123940236 - Lx9 LINE L1 -171 7473 7339 2 910 22 0 0 0 chrX 42710156 42710178 -123940118 + AT_rich Low_complexity Low_complexity 1 22 0 2 910 1499 67 0 0 chrX 42710178 42710373 -123939923 - L1_Mus1 LINE L1 -1 6566 6372 2 910 3446 293 15 19 chrX 42710374 42711373 -123938923 - Lx6 LINE L1 -25 7435 6441 2 910 21 36 0 0 chrX 42711401 42711429 -123938867 + AT_rich Low_complexity Low_complexity 1 28 0 2 910 277 354 23 30 chrX 42711488 42711619 -123938677 - ORR1E LTR MaLR -229 130 1 2 910 372 22 0 0 chrX 42711810 42711855 -123938441 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 910 270 278 1 27 chrX 42712306 42712439 -123937857 + L1M4 LINE L1 5273 5403 -743 2 910 590 323 6 45 chrX 42712439 42712663 -123937633 + B3A SINE B2 2 214 -2 2 910 6846 161 17 5 chrX 42712867 42714164 -123936132 - L1_Mur2 LINE L1 -1538 4339 3028 2 910 2163 180 0 0 chrX 42714164 42714541 -123935755 - Lx2 LINE L1 -395 6602 6226 2 910 2522 152 5 2 chrX 42714541 42714963 -123935333 + Lx LINE L1 6217 6639 -15 2 910 360 0 0 0 chrX 42715234 42715274 -123935022 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 910 411 227 12 99 chrX 42715302 42715473 -123934823 - L1MC3 LINE L1 -645 7140 6985 2 910 22 0 0 0 chrX 42715483 42715505 -123934791 + AT_rich Low_complexity Low_complexity 1 22 0 3 910 458 346 13 9 chrX 42715710 42715943 -123934353 + L1_Mur3 LINE L1 50 283 -7445 3 910 2772 211 39 49 chrX 42715973 42717158 -123933138 + L1_Mur3 LINE L1 859 2033 -3847 3 910 5428 134 48 50 chrX 42717160 42718712 -123931584 + L1_Mus2 LINE L1 5016 6565 -1 3 910 292 290 110 11 chrX 42719058 42719276 -123931020 + L1MA5A LINE L1 4438 4689 -1451 3 910 541 271 9 0 chrX 42719420 42719527 -123930769 + ID_B1 SINE B4 13 120 -104 3 910 410 304 74 16 chrX 42719882 42720139 -123930157 + L1MA5A LINE L1 5608 5879 -418 3 910 216 0 0 0 chrX 42720306 42720330 -123929966 + (TC)n Simple_repeat Simple_repeat 2 25 0 3 910 267 152 0 0 chrX 42720330 42720376 -123929920 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 910 1023 161 40 0 chrX 42720498 42720672 -123929624 - B2_Mm2 SINE B2 -14 181 1 3 910 1045 254 40 5 chrX 42720714 42721108 -123929188 - Lx5 LINE L1 -579 6881 6397 3 910 495 146 62 0 chrX 42721216 42721312 -123928984 + Lx2A1 LINE L1 6880 6981 -27 3 910 24 0 0 0 chrX 42721556 42721580 -123928716 + AT_rich Low_complexity Low_complexity 1 24 0 3 910 517 277 56 12 chrX 42722734 42722908 -123927388 + ORR1D2-int LTR MaLR 1220 1553 -27 3 910 4917 110 2 1 chrX 42722908 42724269 -123926027 + L1Md_A LINE L1 560 1878 -4005 3 910 32500 75 1 3 chrX 42724267 42729304 -123920992 + L1Md_F3 LINE L1 470 5589 -297 3 113 7871 48 10 3 chrX 42729304 42730295 -123920001 + L1Md_F3 LINE L1 5590 6587 0 3 911 432 395 7 0 chrX 42730310 42730456 -123919840 + ORR1D2 LTR MaLR 39 185 -185 3 911 1106 196 106 41 chrX 42730456 42730749 -123919547 - RMER6C LTR ERVK 0 690 379 3 911 10496 166 11 11 chrX 42730774 42731780 -123918516 + Lx LINE L1 3929 4927 -956 3 911 2367 35 3 0 chrX 42731780 42732067 -123918229 - L1Md_A LINE L1 0 6582 6295 3 911 10496 149 45 5 chrX 42732067 42733605 -123916691 + Lx LINE L1 4928 6526 -128 3 911 3304 69 5 9 chrX 42733603 42734042 -123916254 + L1Md_F3 LINE L1 5149 5585 -298 3 911 8181 39 2 1 chrX 42734043 42735038 -123915258 + L1Md_F3 LINE L1 5587 6582 -2 3 911 29 0 0 0 chrX 42735086 42735115 -123915181 + AT_rich Low_complexity Low_complexity 1 29 0 3 911 3063 112 18 0 chrX 42735115 42735561 -123914735 + Lx3_Mus LINE L1 6538 6991 -18 3 911 321 26 0 0 chrX 42735562 42735600 -123914696 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 3 911 413 285 14 27 chrX 42735618 42735766 -123914530 + B1_Mus1 SINE Alu 2 147 -1 3 911 201 163 0 0 chrX 42735767 42735816 -123914480 + A-rich Low_complexity Low_complexity 1 49 0 3 911 322 343 138 14 chrX 42735892 42736037 -123914259 - RSINE1 SINE B4 0 165 3 3 911 7204 46 1 3 chrX 42736121 42737009 -123913287 - L1Md_F2 LINE L1 -2 6580 5695 3 911 10991 70 91 0 chrX 42737004 42738540 -123911756 + L1Md_F2 LINE L1 4020 5695 -188 3 911 559 104 21 10 chrX 42738798 42738895 -123911401 + (TTCC)n Simple_repeat Simple_repeat 3 100 0 3 911 4240 158 31 76 chrX 42739556 42740171 -123910125 + RMER17A2 LTR ERVK 1 576 -330 3 911 894 98 0 0 chrX 42740171 42740304 -123909992 - L1_Mus2 LINE L1 -1 6565 6433 3 911 4240 158 31 76 chrX 42740304 42740637 -123909659 + RMER17A2 LTR ERVK 577 906 0 3 911 288 356 6 70 chrX 42740908 42741065 -123909231 - RSINE1 SINE B4 0 165 19 3 911 320 0 25 0 chrX 42741146 42741186 -123909110 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 3 911 21 0 0 0 chrX 42742498 42742519 -123907777 + AT_rich Low_complexity Low_complexity 1 21 0 3 911 1103 103 0 0 chrX 42742583 42742728 -123907568 + B1_Mus1 SINE Alu 3 147 -1 3 911 198 0 0 0 chrX 42742735 42742757 -123907539 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 911 328 333 29 0 chrX 42742779 42742884 -123907412 + RSINE1 SINE B4 49 156 -9 3 911 2092 148 20 3 chrX 42742923 42743274 -123907022 + Lx2 LINE L1 6640 6996 -1 3 911 618 344 83 42 chrX 42744799 42745063 -123905233 + B4A SINE B4 6 280 -12 3 911 26 0 0 0 chrX 42745139 42745165 -123905131 + AT_rich Low_complexity Low_complexity 1 26 0 3 911 420 20 0 0 chrX 42746083 42746132 -123904164 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 911 1977 170 25 19 chrX 42746853 42747283 -123903013 - RMER1A Other Other -10 1056 631 3 911 820 177 0 0 chrX 42747420 42747550 -123902746 - B3 SINE B2 -86 130 1 3 911 556 224 66 7 chrX 42749270 42749415 -123900881 + RMER16 LTR ERVK 274 450 -83 3 911 664 300 71 30 chrX 42749719 42750015 -123900281 - MTEa LTR MaLR -13 366 59 3 911 492 205 104 96 chrX 42750190 42750325 -123899971 + RLTR20A2 LTR ERVK 1 136 -442 3 911 23 0 0 0 chrX 42750451 42750474 -123899822 + AT_rich Low_complexity Low_complexity 1 23 0 3 911 670 315 86 16 chrX 42751309 42751738 -123898558 + Lx9 LINE L1 7186 7644 0 3 911 259 261 43 51 chrX 42752081 42752198 -123898098 + L1MB2 LINE L1 6054 6169 -2 3 911 3988 113 0 10 chrX 42752744 42753379 -123896917 - L1Md_A LINE L1 -5776 1208 621 3 911 28 48 0 0 chrX 42753416 42753458 -123896838 + AT_rich Low_complexity Low_complexity 1 42 0 3 911 1069 116 0 0 chrX 42753520 42753667 -123896629 - B1_Mus1 SINE Alu 0 148 2 3 911 210 233 0 0 chrX 42753713 42753756 -123896540 + CT-rich Low_complexity Low_complexity 2 44 0 3 911 522 333 40 20 chrX 42753862 42754064 -123896232 + Lx7 LINE L1 6303 6508 -1188 3 911 2098 125 15 48 chrX 42754135 42754369 -123895927 + RMER13A LTR ERVK 1 225 -635 3 911 4517 73 0 12 chrX 42754369 42754964 -123895332 - L1_Mus1 LINE L1 -14 6553 5966 3 911 2098 125 15 48 chrX 42754964 42755065 -123895231 + RMER13A LTR ERVK 226 325 -535 3 911 267 81 27 0 chrX 42755099 42755136 -123895160 + B1_Mm SINE Alu 97 134 -13 3 911 768 136 13 13 chrX 42755175 42755332 -123894964 - L1_Mus3 LINE L1 -3 6635 6479 3 911 2113 270 15 29 chrX 42755332 42755854 -123894442 + RMER13A LTR ERVK 346 860 0 3 911 1659 318 57 28 chrX 42755866 42756551 -123893745 + Lx7 LINE L1 6604 7308 -388 3 911 522 46 0 0 chrX 42756556 42756621 -123893675 + (CTAA)n Simple_repeat Simple_repeat 2 66 0 3 911 11024 77 3 0 chrX 42758110 42759531 -123890765 - MERVL-int LTR ERVL -129 5356 3932 3 911 1886 63 48 11 chrX 42759531 42759802 -123890494 - MT2C_Mm LTR ERVL -194 281 1 3 911 1336 320 114 27 chrX 42760153 42761223 -123889073 - Lx7 LINE L1 -235 7238 6072 3 911 26 0 0 0 chrX 42761453 42761479 -123888817 + AT_rich Low_complexity Low_complexity 1 26 0 3 911 270 311 42 47 chrX 42761745 42761937 -123888359 + L1MEf LINE L1 1410 1600 -4600 3 911 645 353 68 8 chrX 42762239 42762639 -123887657 + L1_Mur3 LINE L1 489 912 -6816 3 911 1649 191 21 3 chrX 42762682 42763007 -123887289 + Lx LINE L1 4970 5300 -586 3 911 2357 81 169 5 chrX 42763005 42763412 -123886884 - L1_Mus3 LINE L1 -553 6085 5612 3 911 2747 135 23 11 chrX 42763412 42763882 -123886414 + L1_Mus3 LINE L1 6157 6632 -6 3 911 2118 153 11 8 chrX 42763898 42764267 -123886029 + L1_Mm LINE L1 5288 5657 -226 3 911 4495 106 11 36 chrX 42764298 42765051 -123885245 - RMER17A LTR ERVK -17 734 1 3 911 5840 146 25 15 chrX 42765051 42766029 -123884267 + Lx LINE L1 5648 6634 -20 3 911 487 186 158 24 chrX 42766048 42766182 -123884114 + L1_Mur3 LINE L1 1108 1270 -6458 3 911 189 0 0 0 chrX 42766182 42766203 -123884093 + (TC)n Simple_repeat Simple_repeat 1 21 0 3 911 324 0 0 0 chrX 42766203 42766238 -123884058 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 911 10097 231 70 34 chrX 42766238 42769479 -123880817 + L1_Mur3 LINE L1 1271 4624 -1256 3 911 523 74 25 0 chrX 42769479 42769560 -123880736 + (CA)n Simple_repeat Simple_repeat 2 84 0 3 911 10097 232 68 34 chrX 42769560 42769755 -123880541 + L1_Mur3 LINE L1 4625 4825 -1055 3 911 3787 75 0 0 chrX 42769782 42770265 -123880031 - L1_Mus1 LINE L1 -7 6560 6078 3 911 3765 73 6 0 chrX 42770271 42770763 -123879533 + L1_Mus1 LINE L1 5587 6081 -486 3 911 697 261 51 55 chrX 42770773 42771065 -123879231 + Lx7 LINE L1 7406 7696 0 3 911 436 345 64 75 chrX 42771303 42771773 -123878523 - L1M4c LINE L1 -4783 1601 1137 3 911 257 163 0 0 chrX 42771863 42771912 -123878384 - Lx6 LINE L1 -228 7232 7184 3 911 337 319 159 18 chrX 42772152 42772315 -123877981 + MTE-int LTR MaLR 384 569 -1011 3 911 24 32 0 0 chrX 42772321 42772352 -123877944 + AT_rich Low_complexity Low_complexity 1 31 0 3 911 340 314 37 50 chrX 42772410 42772571 -123877725 - RLTR14 LTR ERV1 0 382 224 3 911 5100 190 13 8 chrX 42773114 42774197 -123876099 + Lx2B LINE L1 5541 6627 -373 3 911 2832 265 148 33 chrX 42774451 42774597 -123875699 + Lx6 LINE L1 6363 6502 -958 3 911 2759 85 13 0 chrX 42774597 42774974 -123875322 + Lx3_Mus LINE L1 6620 7001 -8 3 911 2832 265 148 33 chrX 42774974 42775802 -123874494 + Lx6 LINE L1 6503 7449 -11 3 911 243 0 0 0 chrX 42775868 42775895 -123874401 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 3 911 2412 162 84 21 chrX 42775895 42776369 -123873927 - Lx3A LINE L1 -15 6966 6463 3 911 26 50 0 0 chrX 42776944 42776984 -123873312 + AT_rich Low_complexity Low_complexity 1 40 0 3 911 3280 166 41 22 chrX 42777111 42777747 -123872549 + L1_Mur2 LINE L1 4126 4773 -1104 3 911 4698 154 3 1 chrX 42777753 42778519 -123871777 + Lx LINE L1 5880 6646 -8 3 911 321 172 0 0 chrX 42779521 42779585 -123870711 + A-rich Low_complexity Low_complexity 1 64 0 3 911 2148 121 30 14 chrX 42779650 42779754 -123870542 + Lx LINE L1 6284 6386 -268 3 911 2486 130 10 17 chrX 42779754 42780160 -123870136 + RLTR9D LTR ERVK 1 403 0 3 911 2148 121 30 14 chrX 42780160 42780417 -123869879 + Lx LINE L1 6387 6650 -4 3 911 180 125 0 0 chrX 42780794 42780826 -123869470 + (TATAA)n Simple_repeat Simple_repeat 1 32 0 3 911 437 286 0 0 chrX 42781233 42781345 -123868951 + Lx7 LINE L1 6830 6941 -755 3 911 423 182 211 6 chrX 42781350 42781516 -123868780 - Lx9 LINE L1 -1 7643 7444 3 911 665 307 58 11 chrX 42781505 42781765 -123868531 + Lx7 LINE L1 6914 7185 -511 3 911 513 0 0 0 chrX 42781808 42781865 -123868431 + (GGAA)n Simple_repeat Simple_repeat 4 60 0 3 911 315 0 0 0 chrX 42782115 42782150 -123868146 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 911 832 314 57 53 chrX 42782201 42782800 -123867496 - L1MA7 LINE L1 -405 5898 5298 3 911 265 294 91 51 chrX 42783216 42783413 -123866883 - L1MB7 LINE L1 -73 6111 5907 3 911 7243 124 23 6 chrX 42783515 42784648 -123865648 + Lx3_Mus LINE L1 5834 6985 -24 3 911 333 0 0 0 chrX 42784649 42784686 -123865610 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 3 911 361 252 76 30 chrX 42784773 42784904 -123865392 + L1MC1 LINE L1 6192 6328 -5 3 911 7480 172 38 18 chrX 42785900 42786304 -123863992 + Lx3C LINE L1 4325 4744 -1142 3 911 299 25 25 0 chrX 42786304 42786344 -123863952 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 3 911 7480 182 39 13 chrX 42786344 42788516 -123861780 + Lx3C LINE L1 4745 6974 -2 3 911 258 32 0 0 chrX 42789138 42789169 -123861127 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 911 30 59 0 0 chrX 42789859 42789910 -123860386 + AT_rich Low_complexity Low_complexity 1 51 0 4 911 459 0 0 0 chrX 42790113 42790164 -123860132 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 4 911 1093 225 39 33 chrX 42790164 42790495 -123859801 - RLTR15 LTR ERVK -26 333 1 4 911 571 337 90 54 chrX 42790599 42791044 -123859252 + MLT1D LTR MaLR 37 497 -8 4 911 679 74 25 8 chrX 42791087 42791209 -123859087 - L1_Mus3 LINE L1 0 6638 6515 4 911 34 79 0 0 chrX 42791238 42791314 -123858982 + AT_rich Low_complexity Low_complexity 1 76 0 4 911 218 318 26 78 chrX 42791657 42791773 -123858523 + MIR SINE MIR 13 122 -140 4 911 2566 206 56 26 chrX 42791983 42792552 -123857744 + RMER6D LTR ERVK 1 586 -134 4 911 5809 134 12 3 chrX 42792553 42793444 -123856852 + Lx LINE L1 5671 6569 -85 4 911 248 275 14 14 chrX 42793519 42793589 -123856707 + GA-rich Low_complexity Low_complexity 2 71 0 4 911 427 156 0 0 chrX 42793749 42793826 -123856470 + Lx LINE L1 6566 6642 -12 4 911 875 36 9 0 chrX 42793826 42793937 -123856359 + (GAAAA)n Simple_repeat Simple_repeat 2 113 0 4 911 395 244 65 86 chrX 42793937 42794076 -123856220 + RMER6D LTR ERVK 581 716 -4 4 911 21 0 0 0 chrX 42794158 42794179 -123856117 + AT_rich Low_complexity Low_complexity 1 21 0 4 911 1039 92 7 0 chrX 42794599 42794741 -123855555 - B1_Mus1 SINE Alu -5 143 1 4 911 715 223 75 9 chrX 42795101 42795185 -123855111 - L1_Mur3 LINE L1 -347 5533 5437 4 911 819 123 0 0 chrX 42795185 42795348 -123854948 + (GTTTG)n Simple_repeat Simple_repeat 2 164 0 4 911 715 237 74 9 chrX 42795348 42795499 -123854797 - L1_Mur3 LINE L1 -862 5471 5307 4 911 1175 143 44 0 chrX 42795687 42795890 -123854406 - Lx2 LINE L1 -11 6986 6775 4 911 4409 148 42 1 chrX 42795889 42796598 -123853698 - Lx2 LINE L1 -352 6645 5908 4 911 450 288 60 8 chrX 42796760 42796893 -123853403 + B1_Mur1 SINE Alu 1 140 -9 4 911 383 56 19 0 chrX 42796897 42796951 -123853345 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 4 911 2601 81 3 14 chrX 42797120 42797470 -123852826 - ORR1A1 LTR MaLR 0 346 1 4 911 1003 223 64 16 chrX 42797523 42797923 -123852373 + RMER6B LTR ERVK 1 459 -2 4 911 186 71 0 0 chrX 42797959 42797987 -123852309 + (TTTAG)n Simple_repeat Simple_repeat 3 30 0 4 911 2259 217 24 24 chrX 42797995 42798589 -123851707 - Lx2B LINE L1 -2 6974 6423 4 911 559 151 78 26 chrX 42798590 42798706 -123851590 + Lx2B LINE L1 6268 6389 -611 4 911 546 16 0 0 chrX 42798715 42798778 -123851518 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 4 911 2904 192 54 85 chrX 42799476 42800215 -123850081 - RMER6D LTR ERVK -4 716 1 4 911 22 35 0 0 chrX 42801505 42801534 -123848762 + AT_rich Low_complexity Low_complexity 1 29 0 4 911 21 0 0 0 chrX 42801776 42801797 -123848499 + AT_rich Low_complexity Low_complexity 1 21 0 4 911 249 283 0 0 chrX 42801941 42802001 -123848295 + RMER15 LTR ERVL 1 60 -515 4 911 885 318 80 128 chrX 42802023 42802600 -123847696 + RMER15 LTR ERVL 27 575 0 4 911 22 0 0 0 chrX 42803173 42803195 -123847101 + AT_rich Low_complexity Low_complexity 1 22 0 4 911 24 85 0 0 chrX 42803344 42803403 -123846893 + AT_rich Low_complexity Low_complexity 1 59 0 4 911 1231 284 57 53 chrX 42803979 42804545 -123845751 - Lx9 LINE L1 -517 7127 6560 4 911 350 292 71 57 chrX 42804584 42804990 -123845306 + Lx9 LINE L1 7225 7636 -8 4 911 288 154 0 0 chrX 42805060 42805112 -123845184 + (CAT)n Simple_repeat Simple_repeat 2 53 0 4 911 425 203 47 48 chrX 42805360 42805573 -123844723 + RMER17C LTR ERVK 95 439 -519 4 911 5608 54 0 0 chrX 42806304 42807002 -123843294 + L1Md_F2 LINE L1 4889 5586 -297 4 911 7925 50 3 17 chrX 42807002 42808012 -123842284 + L1Md_F2 LINE L1 5587 6582 0 4 911 3848 87 2 9 chrX 42808205 42808740 -123841556 + L1Md_F2 LINE L1 6042 6572 -10 4 911 2165 292 46 10 chrX 42808824 42809520 -123840776 - Lx2B LINE L1 -10 6990 6270 4 911 27797 107 8 51 chrX 42810219 42815628 -123834668 + L1Md_F LINE L1 189 5360 -523 4 911 21 0 0 0 chrX 42816162 42816183 -123834113 + AT_rich Low_complexity Low_complexity 1 21 0 4 911 759 108 0 0 chrX 42816406 42816526 -123833770 + (TTTC)n Simple_repeat Simple_repeat 2 121 0 4 911 501 312 93 10 chrX 42816620 42816814 -123833482 - Lx8 LINE L1 -227 7246 7037 4 911 227 333 93 60 chrX 42817563 42817713 -123832583 + MLT2B3 LTR ERVL 396 550 -4 4 911 25 75 0 0 chrX 42817852 42817905 -123832391 + AT_rich Low_complexity Low_complexity 1 53 0 4 911 453 36 0 0 chrX 42817977 42818032 -123832264 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 911 264 279 60 1 chrX 42818130 42818311 -123831985 - L1_Mur3 LINE L1 -471 5826 5670 4 911 21 0 0 0 chrX 42818890 42818911 -123831385 + AT_rich Low_complexity Low_complexity 1 21 0 4 911 21 0 0 0 chrX 42818955 42818976 -123831320 + AT_rich Low_complexity Low_complexity 1 21 0 4 911 3040 14 3 0 chrX 42819612 42819957 -123830339 + ORR1A0 LTR MaLR 1 346 0 4 911 26 74 0 0 chrX 42820005 42820059 -123830237 + AT_rich Low_complexity Low_complexity 1 54 0 4 911 27 73 0 0 chrX 42820434 42820489 -123829807 + AT_rich Low_complexity Low_complexity 1 55 0 4 911 526 283 70 15 chrX 42820520 42820721 -123829575 + B3 SINE B2 3 214 -2 4 911 574 308 85 25 chrX 42820798 42820825 -123829471 - B3 SINE B2 -4 212 188 4 911 213 39 0 0 chrX 42820825 42820851 -123829445 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 911 574 308 85 25 chrX 42820851 42821023 -123829273 - B3 SINE B2 -29 187 1 4 911 28 48 0 0 chrX 42821212 42821254 -123829042 + AT_rich Low_complexity Low_complexity 1 42 0 4 911 2863 30 0 3 chrX 42821565 42821903 -123828393 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 911 10032 26 2 5 chrX 42821903 42823069 -123827227 - IAPEz-int LTR ERVK 0 6481 5320 4 911 27628 30 11 8 chrX 42823068 42826330 -123823966 - IAPEz-int LTR ERVK -3204 3277 8 4 911 2839 33 0 3 chrX 42826330 42826668 -123823628 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 911 419 296 118 53 chrX 42826973 42827500 -123822796 - L1MA4 LINE L1 -374 5926 5366 4 911 55 16 0 0 chrX 42827513 42827575 -123822721 + AT_rich Low_complexity Low_complexity 1 62 0 4 911 1411 53 42 0 chrX 42827575 42827764 -123822532 - L1Md_F3 LINE L1 -15 6569 6373 4 911 571 70 0 0 chrX 42827764 42827835 -123822461 + L1_Mm LINE L1 5501 5571 -312 4 911 8892 80 2 0 chrX 42827838 42829020 -123821276 + L1_Mm LINE L1 4509 5693 -190 4 911 279 114 0 0 chrX 42829117 42829161 -123821135 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 911 32 57 0 0 chrX 42829231 42829284 -123821012 + AT_rich Low_complexity Low_complexity 1 53 0 4 911 231 36 0 0 chrX 42829590 42829618 -123820678 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 4 911 991 91 0 20 chrX 42829619 42829765 -123820531 - B1_Mus1 SINE Alu 0 148 6 4 911 22 80 0 0 chrX 42829961 42830011 -123820285 + AT_rich Low_complexity Low_complexity 1 50 0 4 911 26 64 0 0 chrX 42830085 42830132 -123820164 + AT_rich Low_complexity Low_complexity 1 47 0 4 911 357 391 14 0 chrX 42830205 42830417 -123819879 + ERVL-E-int LTR ERVL 4093 4307 -1360 4 911 23 54 0 0 chrX 42830989 42831026 -123819270 + AT_rich Low_complexity Low_complexity 1 37 0 4 911 294 122 0 0 chrX 42831028 42831077 -123819219 - Lx3A LINE L1 -7 6974 6926 4 911 28 0 0 0 chrX 42831365 42831393 -123818903 + AT_rich Low_complexity Low_complexity 1 28 0 4 911 180 0 0 0 chrX 42832082 42832102 -123818194 + (T)n Simple_repeat Simple_repeat 1 20 0 4 911 260 310 56 5 chrX 42832221 42832419 -123817877 + ERVL-E-int LTR ERVL 5526 5733 -24 4 911 974 358 56 2 chrX 42832445 42832926 -123817370 + MLT2B4 LTR ERVL 7 513 -43 4 911 254 268 11 23 chrX 42833062 42833150 -123817146 + (CATA)n Simple_repeat Simple_repeat 1 87 0 4 911 665 365 25 35 chrX 42833381 42833665 -123816631 + B4A SINE B4 11 291 -1 4 911 202 327 9 18 chrX 42833677 42833789 -123816507 + (CATA)n Simple_repeat Simple_repeat 4 114 0 4 911 1554 96 0 43 chrX 42834395 42834625 -123815671 - L1_Mus2 LINE L1 -340 6226 6007 4 911 1459 141 19 0 chrX 42834643 42834905 -123815391 - L1_Mus3 LINE L1 -2 6636 6370 4 911 31910 105 23 7 chrX 42834929 42841363 -123808933 - L1Md_F2 LINE L1 -14 6568 26 4 911 1066 94 12 12 chrX 42841356 42841529 -123808767 - L1Md_F LINE L1 -5604 915 743 4 911 13610 130 23 28 chrX 42841555 42844170 -123806126 + L1VL4 LINE L1 532 3119 -440 4 911 387 0 0 0 chrX 42844170 42844213 -123806083 + (CAA)n Simple_repeat Simple_repeat 3 45 0 4 911 13610 128 26 32 chrX 42844213 42844353 -123805943 + L1VL4 LINE L1 3120 3272 -287 4 911 3481 150 89 43 chrX 42844380 42845125 -123805171 - RMER17D2 LTR ERVK 0 809 31 4 911 11317 159 9 9 chrX 42845134 42847959 -123802337 + L1_Mus4 LINE L1 3644 6468 -168 4 911 1021 149 124 0 chrX 42848709 42848910 -123801386 - URR1A DNA MER1_type 0 226 1 4 911 627 321 43 5 chrX 42849230 42849415 -123800881 + ID_B1 SINE B4 7 198 -26 4 911 632 245 58 10 chrX 42849528 42849801 -123800495 - ORR1C2 LTR MaLR 0 384 31 4 911 239 314 29 0 chrX 42849807 42849877 -123800419 - RSINE1 SINE B4 -92 73 2 4 911 438 292 75 0 chrX 42850005 42850125 -123800171 - ID_B1 SINE B4 -2 222 94 4 911 741 195 39 32 chrX 42850170 42850324 -123799972 + RMER6C LTR ERVK 1 155 -535 4 911 5884 60 4 3 chrX 42851228 42851983 -123798313 - L1Md_F2 LINE L1 0 6582 5827 4 911 1165 293 124 18 chrX 42852672 42853114 -123797182 - Lx6 LINE L1 -26 7434 6946 4 911 1881 175 19 0 chrX 42853137 42853451 -123796845 - ORR1A2 LTR MaLR 0 327 8 4 911 11043 223 53 36 chrX 42853458 42856747 -123793549 - L1_Mur3 LINE L1 -950 4930 1585 4 911 7084 118 16 4 chrX 42856722 42858023 -123792273 - L1_Mus3 LINE L1 -2 6636 5314 4 911 10772 144 4 14 chrX 42858002 42859854 -123790442 + L1_Mus3 LINE L1 3501 5333 -550 4 911 1552 214 38 39 chrX 42859849 42860398 -123789898 - L1_Mur3 LINE L1 -4255 1622 1099 4 911 722 69 0 10 chrX 42860398 42860500 -123789796 + (TC)n Simple_repeat Simple_repeat 2 102 0 4 113 459 0 0 0 chrX 42860500 42860550 -123789746 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 912 1131 228 36 115 chrX 42860550 42860771 -123789525 - L1_Mur3 LINE L1 -6630 1098 880 4 912 755 314 44 71 chrX 42861151 42861601 -123788695 + RMER1B Other Other 102 746 -320 4 912 404 338 31 37 chrX 42861620 42861783 -123788513 + B3 SINE B2 27 188 -28 4 912 24 32 0 0 chrX 42861783 42861814 -123788482 + AT_rich Low_complexity Low_complexity 1 31 0 4 912 25 0 0 0 chrX 42863371 42863396 -123786900 + AT_rich Low_complexity Low_complexity 1 25 0 4 912 255 311 14 67 chrX 42863886 42864096 -123786200 - Charlie18a DNA MER1_type -101 241 43 4 912 625 217 0 0 chrX 42864346 42864461 -123785835 - Lx6 LINE L1 -588 6872 6758 4 912 953 154 13 2 chrX 42864465 42864849 -123785447 + CT-rich Low_complexity Low_complexity 1 387 0 5 912 535 333 73 60 chrX 42864984 42865434 -123784862 + Lx8 LINE L1 6712 7167 -306 5 912 23 0 0 0 chrX 42866061 42866084 -123784212 + AT_rich Low_complexity Low_complexity 1 23 0 5 912 22 35 0 0 chrX 42866428 42866457 -123783839 + AT_rich Low_complexity Low_complexity 1 29 0 5 912 21 36 0 0 chrX 42866750 42866778 -123783518 + AT_rich Low_complexity Low_complexity 1 28 0 5 912 24 32 0 0 chrX 42866974 42867005 -123783291 + AT_rich Low_complexity Low_complexity 1 31 0 5 912 256 307 0 23 chrX 42867994 42868089 -123782207 - B1F SINE Alu -2 147 55 5 912 994 90 8 0 chrX 42869024 42869158 -123781138 + B1_Mm SINE Alu 13 147 0 5 912 299 61 41 0 chrX 42869161 42869210 -123781086 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 5 912 2398 203 78 61 chrX 42869885 42870561 -123779735 + RMER6C LTR ERVK 1 688 -2 5 912 442 253 36 54 chrX 42871395 42871562 -123778734 + RNLTR23 LTR ERVK 479 642 0 5 912 322 247 39 0 chrX 42872043 42872120 -123778176 + ID4_ SINE ID 2 81 -2 5 912 481 133 209 0 chrX 42872734 42872839 -123777457 + L1Md_F2 LINE L1 6427 6553 -29 5 912 368 289 58 84 chrX 42872839 42872994 -123777302 + B4A SINE B4 71 221 -71 5 912 1019 82 0 0 chrX 42872866 42873000 -123777296 + B1_Mm SINE Alu 14 147 0 5 912 23 33 0 0 chrX 42873179 42873209 -123777087 + AT_rich Low_complexity Low_complexity 1 30 0 5 912 1150 41 14 0 chrX 42873880 42874025 -123776271 + B1_Mm SINE Alu 1 147 0 5 912 499 146 0 63 chrX 42874025 42874103 -123776193 + A-rich Low_complexity Low_complexity 9 85 0 5 912 2902 70 3 0 chrX 42874103 42874576 -123775720 + L1Md_A LINE L1 6196 6582 0 5 912 14050 116 11 6 chrX 42874912 42877766 -123772530 - L1VL4 LINE L1 -474 3085 222 5 912 229 267 0 0 chrX 42878264 42878309 -123771987 + polypyrimidine Low_complexity Low_complexity 2 46 0 5 912 1299 271 27 16 chrX 42878643 42879010 -123771286 - Lx9 LINE L1 -711 6933 6563 5 912 2619 274 59 49 chrX 42879211 42880208 -123770088 - Lx2 LINE L1 -11 6986 5980 5 912 278 265 0 0 chrX 42880215 42880283 -123770013 + B1F1 SINE Alu 82 149 0 5 912 34 55 0 0 chrX 42880427 42880482 -123769814 + AT_rich Low_complexity Low_complexity 1 55 0 5 912 300 253 13 51 chrX 42881820 42881899 -123768397 + MTD LTR MaLR 139 214 -207 5 912 288 0 0 0 chrX 42881916 42881948 -123768348 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 5 912 748 240 32 55 chrX 42881948 42882168 -123768128 + MTD LTR MaLR 196 410 -9 5 912 923 137 5 67 chrX 42882254 42882449 -123767847 + Lx LINE L1 6467 6649 -5 5 912 293 318 18 27 chrX 42882502 42882612 -123767684 + Charlie4 DNA MER1_type 1810 1918 -43 5 912 229 206 14 29 chrX 42882894 42882964 -123767332 + (TAA)n Simple_repeat Simple_repeat 3 71 0 5 912 342 0 0 0 chrX 42883139 42883177 -123767119 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 912 843 344 61 5 chrX 42883181 42883558 -123766738 + Lx8 LINE L1 6193 6590 -883 5 912 598 308 18 0 chrX 42883579 42883748 -123766548 + Lx8 LINE L1 6945 7116 -357 5 912 601 101 5 14 chrX 42883809 42883907 -123766389 + Lx3_Mus LINE L1 5708 5823 -357 5 912 736 101 20 20 chrX 42883907 42884058 -123766238 + RMER17B LTR ERVK 310 460 -498 5 912 4549 113 28 4 chrX 42884062 42884770 -123765526 + Lx3_Mus LINE L1 5783 6507 -502 5 912 2674 221 7 38 chrX 42884763 42885583 -123764713 + L1_Mur3 LINE L1 3284 4047 -1833 5 912 27167 23 3 3 chrX 42885561 42890519 -123759777 + L1Md_A LINE L1 424 5585 -298 5 912 8184 45 1 0 chrX 42890520 42891515 -123758781 + L1Md_A LINE L1 5587 6582 0 5 912 5372 214 96 60 chrX 42891529 42893220 -123757076 + Lx7 LINE L1 4033 5792 -88 5 912 2772 112 28 12 chrX 42893220 42893645 -123756651 + Lx3_Mus LINE L1 6578 7009 0 5 912 5372 230 108 80 chrX 42893645 42894188 -123756108 + Lx7 LINE L1 5793 6395 -1301 5 912 3092 43 43 0 chrX 42894190 42894581 -123755715 - L1Md_F3 LINE L1 -14 6570 6163 5 912 2359 161 5 2 chrX 42894581 42894987 -123755309 - Lx2B LINE L1 -701 6299 5893 5 912 617 193 7 0 chrX 42894986 42895121 -123755175 - L1_Mur2 LINE L1 -1251 4626 4491 5 912 396 190 0 0 chrX 42895214 42895293 -123755003 + (TA)n Simple_repeat Simple_repeat 1 79 0 5 912 24 32 0 0 chrX 42895924 42895955 -123754341 + AT_rich Low_complexity Low_complexity 1 31 0 5 912 282 345 50 31 chrX 42896040 42896300 -123753996 - ERVL-B4-int LTR ERVL -4597 1117 853 5 912 318 267 18 45 chrX 42897179 42897289 -123753007 + MLT1C LTR MaLR 357 463 -4 5 912 3022 150 30 0 chrX 42897409 42897910 -123752386 - Lx2A1 LINE L1 -5 7003 6488 5 912 436 335 72 29 chrX 42898531 42898717 -123751579 + B3A SINE B2 30 216 0 5 912 248 333 32 102 chrX 42898852 42898889 -123751407 + MT2B LTR ERVL 133 158 -443 5 912 598 300 7 0 chrX 42898889 42899029 -123751267 + B1_Mur3 SINE Alu 2 142 -7 5 912 1787 37 0 0 chrX 42899029 42899247 -123751049 + L1Md_F3 LINE L1 6352 6569 -15 5 912 22 111 0 0 chrX 42899596 42899695 -123750601 + AT_rich Low_complexity Low_complexity 1 99 0 5 912 1038 102 0 19 chrX 42902621 42902780 -123747516 + Lx3A LINE L1 5705 5860 -1121 5 912 369 0 0 0 chrX 42903231 42903272 -123747024 + (CAAAA)n Simple_repeat Simple_repeat 5 45 0 5 912 221 211 0 0 chrX 42903308 42903346 -123746950 + B2_Mm2 SINE B2 1 38 -157 5 912 4429 96 7 2 chrX 42903546 42904182 -123746114 - L1_Mus1 LINE L1 0 6567 5941 5 912 364 225 63 48 chrX 42904182 42904308 -123745988 + RLTR13D3 LTR ERVK 945 1072 -42 5 912 395 91 0 135 chrX 42904341 42904430 -123745866 + Lx3A LINE L1 5846 5922 -1087 5 912 432 62 20 49 chrX 42904430 42904532 -123745764 + (CAAAAA)n Simple_repeat Simple_repeat 2 100 0 5 912 5625 161 53 4 chrX 42904536 42905550 -123744746 + Lx3A LINE L1 5907 6970 -11 5 912 840 92 0 0 chrX 42905550 42905669 -123744627 + (TAGA)n Simple_repeat Simple_repeat 4 122 0 5 912 198 0 0 0 chrX 42905669 42905690 -123744606 + (GAAA)n Simple_repeat Simple_repeat 3 24 0 5 912 8450 70 12 1 chrX 42906088 42907206 -123743090 + L1Md_F2 LINE L1 4457 5586 -297 5 912 7275 79 8 2 chrX 42907206 42908193 -123742103 + L1Md_F2 LINE L1 5587 6579 -3 5 912 1451 258 54 44 chrX 42909307 42909508 -123740788 + MTC LTR MaLR 10 193 -228 5 912 1701 184 38 0 chrX 42909508 42909828 -123740468 + Lx2 LINE L1 6666 6997 0 5 912 1451 258 54 44 chrX 42909828 42910031 -123740265 + MTC LTR MaLR 194 417 -4 5 912 183 295 16 0 chrX 42910334 42910395 -123739901 + MIRb SINE MIR 132 193 -75 5 912 678 267 66 47 chrX 42911576 42911666 -123738630 + B3 SINE B2 1 90 -126 5 912 3105 189 90 15 chrX 42911666 42912336 -123737960 - RMER6D LTR ERVK 0 720 1 5 912 678 267 66 47 chrX 42912336 42912457 -123737839 + B3 SINE B2 91 216 0 5 912 466 241 6 6 chrX 42912500 42912663 -123737633 - Lx9 LINE L1 -4 7640 7478 5 912 193 182 36 0 chrX 42913214 42913269 -123737027 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 5 912 1967 255 26 50 chrX 42913269 42913809 -123736487 + RLTR20B3 LTR ERVK 5 531 -46 5 912 234 0 0 0 chrX 42913834 42913860 -123736436 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 912 426 53 0 0 chrX 42914309 42914366 -123735930 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 912 2239 47 0 7 chrX 42914616 42914896 -123735400 - L1Md_T LINE L1 -1 6581 6304 5 912 28 0 0 0 chrX 42915760 42915788 -123734508 + AT_rich Low_complexity Low_complexity 1 28 0 5 912 21 36 0 0 chrX 42916159 42916187 -123734109 + AT_rich Low_complexity Low_complexity 1 28 0 5 912 342 0 0 0 chrX 42917231 42917269 -123733027 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 912 404 352 34 33 chrX 42917271 42917452 -123732844 - B3 SINE B2 -8 208 20 5 912 24 32 0 0 chrX 42917525 42917556 -123732740 + AT_rich Low_complexity Low_complexity 1 31 0 5 912 26 0 0 0 chrX 42917939 42917965 -123732331 + AT_rich Low_complexity Low_complexity 1 26 0 5 912 220 204 17 77 chrX 42918086 42918203 -123732093 + A-rich Low_complexity Low_complexity 6 115 0 5 912 564 167 0 0 chrX 42918568 42918670 -123731626 + Lx2B LINE L1 1301 1402 -4484 5 912 5683 170 59 6 chrX 42918667 42919797 -123730499 + Lx2B LINE L1 3119 4308 -1569 5 912 3365 206 29 19 chrX 42919797 42919845 -123730451 + Lx2B LINE L1 5146 5193 -693 5 912 219 36 0 0 chrX 42919845 42919873 -123730423 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 5 912 3365 206 29 19 chrX 42919873 42919963 -123730333 + Lx2B LINE L1 5194 5292 -594 5 912 668 134 21 0 chrX 42919963 42920105 -123730191 + Lx3_Mus LINE L1 6857 7001 -8 5 912 6997 186 41 11 chrX 42920105 42921057 -123729239 + Lx2B LINE L1 5293 6252 -748 5 912 3198 33 30 0 chrX 42921057 42921456 -123728840 - IAPLTR2a LTR ERVK 0 411 1 5 912 6997 176 47 8 chrX 42921456 42922140 -123728156 + Lx2B LINE L1 6253 6972 -28 5 912 537 55 0 0 chrX 42922329 42922402 -123727894 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 912 543 306 42 28 chrX 42922475 42922687 -123727609 + Lx7 LINE L1 6999 7213 -483 5 912 33 0 0 0 chrX 42923345 42923378 -123726918 + AT_rich Low_complexity Low_complexity 1 33 0 5 912 6984 93 9 10 chrX 42923662 42924650 -123725646 - L1Md_F2 LINE L1 -1 6581 5595 5 912 850 27 18 9 chrX 42924638 42924751 -123725545 + L1_Mm LINE L1 4097 4210 -1673 5 912 1688 195 48 11 chrX 42924777 42925130 -123725166 - Lx3C LINE L1 -3 6973 6608 5 912 35217 71 22 14 chrX 42925891 42931989 -123718307 - L1Md_F2 LINE L1 -4 6578 379 5 912 267 54 0 0 chrX 42932340 42932377 -123717919 + (TTTTTG)n Simple_repeat Simple_repeat 4 40 0 5 912 371 292 35 17 chrX 42935062 42935177 -123715119 + Lx9 LINE L1 6737 6853 -791 5 912 1598 299 11 17 chrX 42935289 42935759 -123714537 - Lx6 LINE L1 -26 7434 6968 5 912 252 0 0 0 chrX 42935762 42935790 -123714506 + (T)n Simple_repeat Simple_repeat 1 28 0 5 912 1064 264 27 45 chrX 42935817 42936147 -123714149 + Lx9 LINE L1 7150 7473 -171 5 912 290 312 13 0 chrX 42936448 42936525 -123713771 + ID4 SINE ID 5 82 -1 5 912 22 0 0 0 chrX 42936693 42936715 -123713581 + AT_rich Low_complexity Low_complexity 1 22 0 5 912 974 169 0 34 chrX 42936799 42936976 -123713320 + L1VL4 LINE L1 14 184 -6118 5 912 584 129 0 0 chrX 42936968 42937061 -123713235 + L1VL4 LINE L1 651 743 -5559 5 912 413 280 38 106 chrX 42937062 42937222 -123713074 + B4 SINE B4 73 221 -71 5 912 954 133 0 0 chrX 42937084 42937227 -123713069 + B1_Mus1 SINE Alu 6 148 0 5 912 3177 145 71 21 chrX 42937231 42937761 -123712535 + L1VL4 LINE L1 1108 1682 -4201 5 912 189 0 0 0 chrX 42937761 42937782 -123712514 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 6 912 3177 173 107 30 chrX 42937782 42938144 -123712152 + L1VL4 LINE L1 1683 2060 -3823 5 912 324 0 0 0 chrX 42938854 42938890 -123711406 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 912 969 107 36 0 chrX 42938941 42939109 -123711187 + (TTTC)n Simple_repeat Simple_repeat 2 175 0 6 912 3483 217 25 14 chrX 42939137 42939858 -123710438 - Lx3C LINE L1 -2 6974 6246 6 912 1070 169 76 4 chrX 42939854 42940103 -123710193 + L1_Mur1 LINE L1 3831 4097 -1789 6 912 1007 167 24 19 chrX 42940108 42940316 -123709980 + Lx3B LINE L1 6765 6973 0 6 912 3016 147 40 2 chrX 42940675 42941174 -123709122 - Lx LINE L1 0 6654 6137 6 912 728 155 19 0 chrX 42941435 42941590 -123708706 - Lx2A1 LINE L1 -9 6999 6842 6 912 451 263 34 0 chrX 42942055 42942173 -123708123 - RMER20B LTR ERVK -505 122 1 6 912 5012 112 21 13 chrX 42943559 42944780 -123705516 + Lx3A LINE L1 5256 6476 -505 6 912 3083 102 10 27 chrX 42944835 42945321 -123704975 + L1Md_F2 LINE L1 6105 6582 0 6 912 2125 268 86 33 chrX 42945340 42946486 -123703810 + ORR1D-int LTR MaLR 1 1231 -139 6 912 40 49 0 0 chrX 42947459 42947520 -123702776 + AT_rich Low_complexity Low_complexity 1 61 0 6 912 32 75 0 0 chrX 42948085 42948152 -123702144 + AT_rich Low_complexity Low_complexity 1 67 0 6 912 342 283 45 58 chrX 42948480 42948634 -123701662 + Lx9 LINE L1 5817 5968 -1676 6 912 204 125 0 0 chrX 42948896 42948928 -123701368 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 6 912 1389 311 108 70 chrX 42948932 42949923 -123700373 + Lx9 LINE L1 6410 7438 -206 6 912 655 98 277 0 chrX 42950346 42950458 -123699838 + B1_Mus1 SINE Alu 5 147 -1 6 912 22 35 0 0 chrX 42950768 42950797 -123699499 + AT_rich Low_complexity Low_complexity 1 29 0 6 912 216 67 0 0 chrX 42950846 42950876 -123699420 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 912 351 0 0 0 chrX 42950876 42950915 -123699381 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 6 912 1194 154 0 18 chrX 42950938 42951156 -123699140 - Lx3A LINE L1 -2 6979 6766 6 912 3920 109 22 3 chrX 42951165 42951746 -123698550 + Lx3A LINE L1 6145 6736 -245 6 912 6769 42 6 0 chrX 42951757 42952591 -123697705 + L1Md_F2 LINE L1 5739 6577 -5 6 912 2521 104 8 19 chrX 42953045 42953408 -123696888 + RLTR10D LTR ERVK 1 359 0 6 912 49920 72 11 13 chrX 42953408 42956861 -123693435 + IAP-d-int LTR ERVK 1 3470 -3072 6 912 4768 58 7 5 chrX 42956861 42957469 -123692827 + L1Md_F2 LINE L1 5974 6582 0 6 912 49920 72 11 13 chrX 42957469 42960569 -123689727 + IAP-d-int LTR ERVK 3471 6542 0 6 912 2527 97 53 0 chrX 42960569 42960910 -123689386 + RLTR10D LTR ERVK 1 359 0 6 912 322 20 19 39 chrX 42961447 42961499 -123688797 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 6 912 913 125 0 0 chrX 42961500 42961636 -123688660 - B1_Mus1 SINE Alu -12 136 1 6 912 181 47 75 45 chrX 42962899 42962966 -123687330 + (TATATG)n Simple_repeat Simple_repeat 2 70 0 6 912 846 328 24 54 chrX 42963220 42963646 -123686650 - Lx8 LINE L1 -401 7072 6660 6 912 1971 260 72 21 chrX 42963770 42964328 -123685968 + Lx6 LINE L1 6284 6869 -591 6 912 208 353 92 23 chrX 42964609 42964783 -123685513 + MIR SINE MIR 43 228 -34 6 912 25 0 0 0 chrX 42964874 42964899 -123685397 + AT_rich Low_complexity Low_complexity 1 25 0 6 912 703 312 30 4 chrX 42966343 42966578 -123683718 + MTEb LTR MaLR 131 371 -8 6 912 400 138 25 17 chrX 42966643 42966761 -123683535 + (TA)n Simple_repeat Simple_repeat 2 120 0 6 912 30 27 0 0 chrX 42967228 42967265 -123683031 + AT_rich Low_complexity Low_complexity 1 37 0 6 912 792 72 16 8 chrX 42967920 42968046 -123682250 + (TA)n Simple_repeat Simple_repeat 2 128 0 6 912 576 164 0 0 chrX 42968619 42968729 -123681567 + (TA)n Simple_repeat Simple_repeat 1 110 0 6 912 330 115 0 0 chrX 42968768 42968820 -123681476 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 912 1258 349 24 11 chrX 42969233 42969889 -123680407 - Lx8 LINE L1 -451 7022 6340 6 912 545 264 49 34 chrX 42969932 42970157 -123680139 + L1_Mur3 LINE L1 4479 4727 -1150 6 912 1624 162 10 14 chrX 42970157 42970445 -123679851 + Lx LINE L1 6355 6641 -13 6 912 798 300 94 49 chrX 42970445 42970949 -123679347 + L1_Mur3 LINE L1 4728 5243 -637 6 912 23 0 0 0 chrX 42971383 42971406 -123678890 + AT_rich Low_complexity Low_complexity 1 23 0 6 912 4629 145 32 2 chrX 42971629 42972418 -123677878 + Lx2 LINE L1 6186 6997 0 6 912 7389 136 28 30 chrX 42972758 42974808 -123675488 + L1VL1 LINE L1 207 2250 -1448 6 912 36801 30 4 8 chrX 42974811 42980421 -123669875 + L1Md_A LINE L1 1 5586 -297 6 912 8182 41 1 0 chrX 42980422 42981415 -123668881 + L1Md_A LINE L1 5588 6581 -1 6 912 5201 107 25 4 chrX 42981419 42982254 -123668042 + L1VL1 LINE L1 2237 3089 -609 6 912 6070 138 65 0 chrX 42982248 42983365 -123666931 + L1_Mus3 LINE L1 5446 6635 -3 6 912 356 0 23 0 chrX 42983406 42983450 -123666846 + (TA)n Simple_repeat Simple_repeat 1 45 0 6 912 233 189 38 0 chrX 42983526 42983579 -123666717 + GA-rich Low_complexity Low_complexity 6 60 0 6 912 368 288 50 50 chrX 42983580 42983880 -123666416 - ERVL-B4-int LTR ERVL -145 5569 5270 6 912 581 266 131 66 chrX 42984047 42984510 -123665786 - RMER20B LTR ERVK 0 516 3 6 912 1533 329 57 30 chrX 42984812 42985618 -123664678 - Lx9 LINE L1 -205 7439 6612 6 912 527 315 102 45 chrX 42986419 42986911 -123663385 + L1M4 LINE L1 2316 2835 -3311 6 912 271 272 11 0 chrX 42986939 42987031 -123663265 + L1M4 LINE L1 2903 2995 -3145 6 912 853 142 13 0 chrX 42987055 42987210 -123663086 + GA-rich Low_complexity Low_complexity 1 157 0 6 912 1281 80 0 0 chrX 42987218 42987393 -123662903 + (GGAAA)n Simple_repeat Simple_repeat 5 179 0 6 912 344 378 0 16 chrX 42987445 42987566 -123662730 + RSINE1 SINE B4 26 144 -21 6 912 1516 337 53 11 chrX 42988468 42989115 -123661181 + Lx8 LINE L1 6241 6914 -559 6 912 864 145 0 0 chrX 42989859 42990004 -123660292 + (TA)n Simple_repeat Simple_repeat 2 146 0 6 912 1274 265 88 24 chrX 42990203 42990705 -123659591 + Lx9 LINE L1 7091 7624 -20 6 912 894 329 147 5 chrX 42990765 42991147 -123659149 - Lx6 LINE L1 -74 7386 6951 6 912 954 144 0 16 chrX 42991222 42991357 -123658939 + polypurine Low_complexity Low_complexity 1 135 0 6 912 1452 44 0 0 chrX 42991357 42991537 -123658759 + (GAA)n Simple_repeat Simple_repeat 1 180 0 6 912 954 144 0 16 chrX 42991537 42991584 -123658712 + polypurine Low_complexity Low_complexity 136 180 0 6 14 377 188 12 0 chrX 42991584 42991669 -123658627 + GA-rich Low_complexity Low_complexity 1 86 0 6 913 7018 114 4 1 chrX 42991684 42993372 -123656924 - L1_Mus1 LINE L1 0 6567 4874 6 913 2865 30 0 3 chrX 42993372 42993710 -123656586 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 913 54317 23 14 6 chrX 42993710 43000000 -123650296 - IAPEz-int LTR ERVK 0 6481 142 6 913 705 21 96 0 chrX 43000000 43000094 -123650202 - IAPEz-int LTR ERVK -6340 141 39 1 913 8219 95 13 0 chrX 43000094 43000108 -123650188 - L1_Mm LINE L1 -989 4894 4881 2 913 2854 33 0 3 chrX 43000108 43000446 -123649850 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 913 8219 95 13 0 chrX 43000446 43000688 -123649608 - L1_Mm LINE L1 -1003 4880 4630 2 913 234 0 0 0 chrX 43000688 43000714 -123649582 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 913 8219 95 13 0 chrX 43000714 43001635 -123648661 - L1_Mm LINE L1 -1254 4629 3703 2 913 929 307 31 48 chrX 43001635 43001987 -123648309 + RMER15 LTR ERVL 216 561 -14 5 913 358 246 46 10 chrX 43002028 43002224 -123648072 - Lx9 LINE L1 -2 7642 7404 6 913 1162 275 48 22 chrX 43002227 43002598 -123647698 + Lx9 LINE L1 6986 7366 -278 6 913 1122 133 6 0 chrX 43002606 43002786 -123647510 + L1_Mus1 LINE L1 6386 6566 -1 7 913 6999 62 0 27 chrX 43003588 43004522 -123645774 - L1Md_F2 LINE L1 0 6582 5674 8 913 300 136 24 36 chrX 43004618 43004702 -123645594 + (TA)n Simple_repeat Simple_repeat 1 83 0 9 913 347 21 43 0 chrX 43005227 43005274 -123645022 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1 913 22 35 0 0 chrX 43005685 43005714 -123644582 + AT_rich Low_complexity Low_complexity 1 29 0 1 913 1610 222 3 21 chrX 43006085 43006458 -123643838 + Lx4B LINE L1 6689 7054 -4 1 913 253 149 0 0 chrX 43007408 43007455 -123642841 + L1M2 LINE L1 3637 3683 -2460 1 913 5185 236 60 26 chrX 43007646 43008936 -123641360 - Lx5 LINE L1 -88 6962 5630 1 913 4414 240 43 16 chrX 43008933 43010042 -123640254 + Lx5 LINE L1 5904 7042 -8 1 913 906 73 0 0 chrX 43010045 43010168 -123640128 + (GAAA)n Simple_repeat Simple_repeat 2 124 0 1 913 468 310 92 0 chrX 43010189 43010373 -123639923 - B3 SINE B2 0 216 16 1 913 1197 278 147 31 chrX 43010374 43010658 -123639638 + L1M2 LINE L1 3696 4015 -2128 1 913 501 71 0 0 chrX 43010658 43010728 -123639568 + (TATG)n Simple_repeat Simple_repeat 2 71 0 1 913 1197 278 147 31 chrX 43010728 43011390 -123638906 + L1M2 LINE L1 4016 4752 -1391 1 913 254 387 51 48 chrX 43011578 43011871 -123638425 + MTE-int LTR MaLR 1122 1415 -165 1 913 1853 33 2 0 chrX 43012248 43012472 -123637824 - L1Md_A LINE L1 -980 5658 5432 2 913 2586 35 0 0 chrX 43012470 43012780 -123637516 + L1Md_A LINE L1 5719 6028 -554 2 913 35426 81 7 9 chrX 43012781 43015362 -123634934 + L1Md_T LINE L1 283 2821 -3062 2 913 4412 14 0 0 chrX 43015362 43015853 -123634443 + MT2_Mm LTR ERVL 3 493 0 2 913 35426 38 2 3 chrX 43015853 43018627 -123631669 + L1Md_T LINE L1 2822 5586 -297 2 913 7875 61 0 1 chrX 43018627 43019624 -123630672 + L1Md_T LINE L1 5587 6582 0 2 913 3024 44 3 0 chrX 43019630 43019995 -123630301 + L1Md_T LINE L1 6016 6381 -201 2 913 351 312 98 38 chrX 43020287 43020470 -123629826 + L1M5 LINE L1 5372 5565 -608 2 913 295 307 50 17 chrX 43020569 43020829 -123629467 + L1MA8 LINE L1 5659 5925 -366 2 913 212 360 53 73 chrX 43021031 43021181 -123629115 + B3 SINE B2 42 188 -28 2 913 288 223 136 32 chrX 43021191 43021316 -123628980 - Lx7 LINE L1 0 7696 7559 2 913 6773 122 24 6 chrX 43021478 43022526 -123627770 + Lx3_Mus LINE L1 5943 7009 0 2 913 462 214 0 0 chrX 43022569 43022658 -123627638 + Lx7 LINE L1 7154 7242 -454 2 913 8160 127 29 4 chrX 43022686 43023977 -123626319 - Lx3_Mus LINE L1 -13 6996 5674 3 913 5448 104 5 55 chrX 43023967 43024234 -123626062 + L1_Mur1 LINE L1 4865 5116 -770 3 913 1312 78 0 6 chrX 43024234 43024415 -123625881 + L1_Mus1 LINE L1 6387 6566 -1 3 913 5448 104 5 55 chrX 43024415 43025012 -123625284 + L1_Mur1 LINE L1 5117 5685 -201 3 913 3147 261 59 20 chrX 43025054 43025848 -123624448 - Lx6 LINE L1 -20 7440 6616 3 913 231 88 0 0 chrX 43025885 43025919 -123624377 + (CAA)n Simple_repeat Simple_repeat 1 34 0 3 913 206 193 18 0 chrX 43025968 43026025 -123624271 + CT-rich Low_complexity Low_complexity 3 60 0 3 913 1311 208 43 77 chrX 43026088 43026437 -123623859 + Lx4B LINE L1 6699 7035 -23 3 913 483 18 0 0 chrX 43026440 43026496 -123623800 + (TAAA)n Simple_repeat Simple_repeat 1 56 0 3 913 400 264 8 76 chrX 43026541 43026672 -123623624 - RMER6A LTR ERVK -634 122 1 3 913 37743 50 2 8 chrX 43026772 43033169 -123617127 - L1Md_T LINE L1 0 6582 232 3 913 399 316 59 7 chrX 43033215 43033368 -123616928 + B4A SINE B4 101 261 -31 4 913 271 241 22 0 chrX 43034866 43035005 -123615291 + GA-rich Low_complexity Low_complexity 1 142 0 4 913 21 57 0 0 chrX 43035338 43035373 -123614923 + AT_rich Low_complexity Low_complexity 1 35 0 4 913 564 64 32 0 chrX 43036040 43036134 -123614162 + (TA)n Simple_repeat Simple_repeat 2 98 0 4 913 231 36 0 0 chrX 43036452 43036480 -123613816 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 913 3086 211 44 83 chrX 43036678 43036822 -123613474 + RLTR25B LTR ERVK 1 140 -888 4 913 306 0 0 0 chrX 43036822 43036856 -123613440 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 913 3086 211 44 83 chrX 43036856 43037392 -123612904 + RLTR25B LTR ERVK 141 648 -380 4 913 371 173 0 0 chrX 43037392 43037473 -123612823 - L1Md_F2 LINE L1 0 6582 6502 4 913 3086 211 44 83 chrX 43037473 43037609 -123612687 + RLTR25B LTR ERVK 649 786 -242 4 913 459 259 37 22 chrX 43037597 43037731 -123612565 + RLTR25B LTR ERVK 968 1103 0 4 913 582 102 18 18 chrX 43037799 43037909 -123612387 + (TTCC)n Simple_repeat Simple_repeat 3 112 0 4 913 29 28 0 0 chrX 43038118 43038154 -123612142 + AT_rich Low_complexity Low_complexity 1 36 0 4 913 373 358 22 0 chrX 43038491 43038628 -123611668 + Lx8 LINE L1 7153 7292 -181 5 913 324 172 0 0 chrX 43038879 43038937 -123611359 - L1_Mur2 LINE L1 -531 5346 5289 5 913 3808 80 0 12 chrX 43038937 43039446 -123610850 - L1Md_F2 LINE L1 -11 6571 6069 5 913 1850 70 0 0 chrX 43039446 43039690 -123610606 + L1_Mm LINE L1 4422 4665 -1218 5 913 493 300 42 30 chrX 43040114 43040279 -123610017 - B3 SINE B2 0 216 50 5 913 321 215 0 0 chrX 43040463 43040556 -123609740 + (TA)n Simple_repeat Simple_repeat 2 94 0 5 913 3432 88 20 2 chrX 43041358 43041846 -123608450 + L1_Mus3 LINE L1 6142 6638 0 5 913 1035 186 94 9 chrX 43042547 43042593 -123607703 - RMER19C LTR ERVK 0 611 562 5 913 1346 148 18 0 chrX 43042593 43042822 -123607474 - Lx2 LINE L1 -7 6990 6758 5 913 1035 186 94 9 chrX 43042822 43043008 -123607288 - RMER19C LTR ERVK -50 561 360 5 913 677 179 8 43 chrX 43043006 43043189 -123607107 - RMER19C LTR ERVK -368 243 1 5 913 36 62 0 0 chrX 43043292 43043356 -123606940 + AT_rich Low_complexity Low_complexity 1 64 0 5 913 333 0 0 0 chrX 43043909 43043946 -123606350 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 913 1484 92 109 4 chrX 43043988 43044218 -123606078 + L1Md_F2 LINE L1 6329 6582 0 6 913 305 344 96 61 chrX 43044314 43044512 -123605784 - MTEa LTR MaLR -174 205 1 6 913 468 51 0 0 chrX 43044587 43044646 -123605650 + (TA)n Simple_repeat Simple_repeat 1 59 0 6 913 1043 319 23 42 chrX 43045585 43045971 -123604325 + MTE2b LTR MaLR 1 379 0 6 913 517 171 130 0 chrX 43046619 43046742 -123603554 + Lx3C LINE L1 6837 6975 -1 6 913 575 149 9 0 chrX 43047222 43047329 -123602967 + CT-rich Low_complexity Low_complexity 6 113 0 6 913 21 36 0 0 chrX 43047924 43047952 -123602344 + AT_rich Low_complexity Low_complexity 1 28 0 6 913 2430 285 61 45 chrX 43047959 43048070 -123602226 - Lx9 LINE L1 -3 7641 7526 6 913 1736 53 9 0 chrX 43048070 43048295 -123602001 - L1Md_A LINE L1 -1 6581 6355 6 913 2430 285 61 45 chrX 43048295 43048347 -123601949 - Lx9 LINE L1 -119 7525 7486 6 913 432 0 0 0 chrX 43048347 43048395 -123601901 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 913 2430 285 61 45 chrX 43048395 43049318 -123600978 - Lx9 LINE L1 -159 7485 6537 6 913 717 57 0 9 chrX 43049361 43049468 -123600828 + L1Md_F2 LINE L1 6459 6564 -18 7 913 3493 109 9 11 chrX 43049610 43050257 -123600039 + L1Md_F3 LINE L1 625 1256 -5468 7 913 27564 78 7 8 chrX 43050227 43054132 -123596164 + L1Md_F3 LINE L1 2070 5969 -615 7 913 337 83 42 0 chrX 43054121 43054169 -123596127 + L1Md_F2 LINE L1 5536 5585 -298 7 913 7791 58 3 3 chrX 43054170 43055165 -123595131 + L1Md_F2 LINE L1 5587 6581 -1 7 913 297 0 0 0 chrX 43056561 43056594 -123593702 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 913 2032 144 0 14 chrX 43059138 43059484 -123590812 + Lx LINE L1 6312 6652 -2 7 913 223 141 0 30 chrX 43059486 43059552 -123590744 + (TATAA)n Simple_repeat Simple_repeat 5 68 0 7 913 631 282 126 19 chrX 43059595 43060055 -123590241 - Lx7 LINE L1 -1807 5889 5361 7 913 303 263 10 10 chrX 43060079 43060179 -123590117 - Lx2B LINE L1 -5 6995 6896 7 913 669 294 51 40 chrX 43060488 43060761 -123589535 - RMER5 LTR ERV1 -9 525 250 7 913 189 0 0 0 chrX 43060838 43060859 -123589437 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 913 502 263 70 5 chrX 43060971 43061170 -123589126 + Lx7 LINE L1 7484 7695 -1 8 913 798 308 87 48 chrX 43061276 43062267 -123588029 - L1M2 LINE L1 -1137 5006 3978 8 913 201 197 0 0 chrX 43062286 43062347 -123587949 + (TA)n Simple_repeat Simple_repeat 2 62 0 8 913 351 0 0 0 chrX 43062347 43062386 -123587910 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 8 913 5351 152 11 23 chrX 43062393 43063352 -123586944 - Lx3B LINE L1 -2 6971 6024 8 913 2814 123 10 4 chrX 43063378 43063899 -123586397 + Lx3B LINE L1 5455 5974 -999 8 913 378 0 0 0 chrX 43063935 43063977 -123586319 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 8 913 371 326 35 26 chrX 43063977 43064234 -123586062 - L1_Mur3 LINE L1 -2025 3861 3604 8 913 3958 159 3 12 chrX 43064278 43064946 -123585350 + Lx LINE L1 5605 6266 -388 8 913 7497 77 7 1 chrX 43064954 43065942 -123584354 + L1Md_F2 LINE L1 5589 6582 0 9 913 2270 146 36 3 chrX 43066311 43066696 -123583600 + Lx3_Mus LINE L1 6596 6993 -16 9 913 1193 96 6 0 chrX 43066697 43066875 -123583421 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 9 913 379 267 76 90 chrX 43067016 43067201 -123583095 - Lx4B LINE L1 -1 7057 6763 9 913 390 260 38 48 chrX 43067739 43067844 -123582452 - RLTR16 LTR ERVK -378 127 24 9 913 245 225 0 0 chrX 43067861 43067923 -123582373 + L1_Mur3 LINE L1 4700 4792 -1351 9 913 393 22 0 0 chrX 43068462 43068508 -123581788 + (GA)n Simple_repeat Simple_repeat 2 47 0 9 913 2049 222 19 85 chrX 43069001 43069626 -123580670 + RLTR31A_Mm LTR ERVK 1 584 0 9 913 216 235 0 0 chrX 43069760 43069828 -123580468 + GA-rich Low_complexity Low_complexity 3 70 0 9 913 667 246 7 55 chrX 43069998 43070144 -123580152 + RSINE1 SINE B4 27 165 0 9 913 276 137 0 0 chrX 43070153 43070204 -123580092 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 913 22 80 0 0 chrX 43070515 43070565 -123579731 + AT_rich Low_complexity Low_complexity 1 50 0 1 913 229 259 67 67 chrX 43070572 43070692 -123579604 - Lx8 LINE L1 -1 7472 7353 1 913 925 285 88 18 chrX 43070845 43071231 -123579065 - Lx8 LINE L1 -326 7147 6735 1 913 3377 123 17 2 chrX 43071259 43071796 -123578500 - L1_Mus3 LINE L1 -5 6633 6089 1 913 2916 105 5 18 chrX 43071796 43072233 -123578063 + L1_Mus3 LINE L1 5661 6091 -547 1 913 4140 139 75 15 chrX 43072249 43072977 -123577319 + Lx3B LINE L1 6202 6973 0 1 913 324 83 0 0 chrX 43072979 43073027 -123577269 + (TAA)n Simple_repeat Simple_repeat 1 48 0 1 913 1365 175 80 48 chrX 43073051 43073363 -123576933 - RLTR22_Mur LTR ERVK 0 1848 1527 1 913 3584 158 79 29 chrX 43073464 43074215 -123576081 - RLTR22_Mur LTR ERVK -1043 805 18 1 913 990 356 83 52 chrX 43074223 43074522 -123575774 + Lx9 LINE L1 5675 5975 -1498 1 913 516 32 0 0 chrX 43074522 43074584 -123575712 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 913 990 356 83 52 chrX 43074584 43074768 -123575528 + Lx9 LINE L1 5976 6177 -1296 1 913 363 96 0 0 chrX 43074768 43074820 -123575476 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 913 1434 334 45 52 chrX 43074820 43075708 -123574588 + Lx9 LINE L1 6178 7218 -426 1 913 2901 84 7 9 chrX 43075844 43076266 -123574030 - BGLII LTR ERVK 0 421 1 1 913 1008 53 0 0 chrX 43076323 43076454 -123573842 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 1 913 1804 124 7 3 chrX 43076729 43077013 -123573283 - L1_Mus3 LINE L1 -8 6630 6346 1 913 231 36 0 0 chrX 43077042 43077070 -123573226 + (T)n Simple_repeat Simple_repeat 1 28 0 1 913 225 368 10 10 chrX 43077947 43078043 -123572253 + MIRc SINE MIR 2 97 -171 1 913 486 340 42 27 chrX 43078447 43078780 -123571516 + Lx9 LINE L1 5419 5756 -91 1 913 616 313 26 80 chrX 43078784 43079086 -123571210 + Lx8 LINE L1 6719 7004 -469 1 913 342 0 0 0 chrX 43079162 43079200 -123571096 + (TATG)n Simple_repeat Simple_repeat 4 41 0 1 913 459 342 58 83 chrX 43079225 43079502 -123570794 - B4A SINE B4 -12 280 11 1 913 219 36 0 0 chrX 43079966 43079994 -123570302 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 913 495 87 0 0 chrX 43080010 43080079 -123570217 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 913 1651 290 49 0 chrX 43080081 43080509 -123569787 + Lx9 LINE L1 6353 6801 -843 1 913 3315 75 7 2 chrX 43080546 43081002 -123569294 + MT2C_Mm LTR ERVL 18 475 0 1 913 1994 280 67 6 chrX 43081002 43081703 -123568593 + Lx9 LINE L1 6853 7596 -48 1 913 563 325 40 36 chrX 43081700 43081975 -123568321 + Lx8 LINE L1 7081 7356 -117 1 913 246 160 0 123 chrX 43082013 43082070 -123568226 - Lx6 LINE L1 -302 7158 7109 1 913 539 207 241 3 chrX 43082069 43082234 -123568062 - L1_Mur3 LINE L1 -210 5670 5432 1 913 839 245 24 14 chrX 43082234 43082445 -123567851 - Lx7 LINE L1 -714 6982 6770 1 913 254 29 29 0 chrX 43082450 43082485 -123567811 + (TTTG)n Simple_repeat Simple_repeat 4 39 0 1 913 7371 97 17 2 chrX 43082485 43084313 -123565983 + L1_Mus1 LINE L1 4707 6567 0 1 913 263 280 68 31 chrX 43084400 43084562 -123565734 - L1M4c LINE L1 -4144 2590 2423 1 913 1665 196 268 7 chrX 43084582 43085127 -123565169 + RMER6C LTR ERVK 1 687 -3 1 913 1042 36 15 0 chrX 43085213 43085350 -123564946 + B1_Mm SINE Alu 9 147 0 1 913 615 341 43 87 chrX 43085544 43085936 -123564360 - MTEa LTR MaLR -4 375 1 1 913 233 339 92 65 chrX 43087101 43087309 -123562987 + Tigger7 DNA MER2_type 2185 2398 -93 1 913 3052 48 13 8 chrX 43087309 43087707 -123562589 - MTB LTR MaLR 0 400 1 1 913 233 339 92 65 chrX 43087707 43087760 -123562536 + Tigger7 DNA MER2_type 2399 2452 -39 1 913 294 329 35 28 chrX 43088144 43088288 -123562008 + MER5A1 DNA MER1_type 2 146 -20 1 913 207 225 0 27 chrX 43088482 43088555 -123561741 + A-rich Low_complexity Low_complexity 4 74 0 1 913 260 307 56 11 chrX 43088622 43088711 -123561585 - L1M4c LINE L1 -5221 1432 1340 1 913 342 0 0 0 chrX 43089144 43089182 -123561114 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1 913 237 322 72 32 chrX 43089345 43089470 -123560826 - B1F SINE Alu -1 148 19 1 913 6986 165 6 14 chrX 43089897 43091146 -123559150 - Lx4A LINE L1 -10 7048 5810 1 913 335 356 68 48 chrX 43091685 43092080 -123558216 - L1ME4a LINE L1 -104 6020 5618 1 913 27 62 0 0 chrX 43092723 43092771 -123557525 + AT_rich Low_complexity Low_complexity 1 48 0 1 913 2287 158 35 5 chrX 43092781 43093213 -123557083 - Lx2 LINE L1 -7 6990 6546 1 913 2242 75 0 0 chrX 43093213 43093505 -123556791 - Lx2 LINE L1 -1117 5880 5589 1 913 1432 212 112 151 chrX 43093689 43094433 -123555863 - RMER6D LTR ERVK -4 716 2 1 913 1337 101 14 5 chrX 43094457 43094666 -123555630 - L1_Mus3 LINE L1 -3 6635 6425 1 913 358 173 189 25 chrX 43094947 43095143 -123555153 - Lx9 LINE L1 -1 7643 7416 1 913 321 361 86 51 chrX 43095728 43095963 -123554333 - B4 SINE B4 -35 257 11 1 913 628 308 108 12 chrX 43096309 43096644 -123553652 - Lx8 LINE L1 -7 7466 7100 1 913 25954 79 1 1 chrX 43096644 43100131 -123550165 + L1Md_F2 LINE L1 2100 5586 -297 1 913 7384 56 30 8 chrX 43100131 43101106 -123549190 + L1Md_F2 LINE L1 5587 6582 0 1 913 425 369 106 39 chrX 43101114 43101460 -123548836 - Lx8 LINE L1 -314 7159 6810 1 913 405 0 0 0 chrX 43101460 43101505 -123548791 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 913 425 369 106 39 chrX 43101505 43101621 -123548675 - Lx8 LINE L1 -664 6809 6666 1 913 263 176 68 105 chrX 43101633 43101766 -123548530 + L1MA8 LINE L1 6123 6250 -41 1 913 3464 172 65 32 chrX 43102886 43103596 -123546700 - RMER19A LTR ERVK -3 734 2 1 913 1144 48 0 0 chrX 43104282 43104427 -123545869 - B1_Mm SINE Alu -2 145 1 1 913 24 85 0 0 chrX 43104700 43104759 -123545537 + AT_rich Low_complexity Low_complexity 1 59 0 1 913 22 0 0 0 chrX 43105587 43105609 -123544687 + AT_rich Low_complexity Low_complexity 1 22 0 1 913 405 0 0 0 chrX 43105694 43105739 -123544557 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 913 283 299 47 0 chrX 43105939 43106046 -123544250 + L1_Mur2 LINE L1 5073 5184 -693 1 913 22 70 0 0 chrX 43106063 43106106 -123544190 + AT_rich Low_complexity Low_complexity 1 43 0 1 913 348 316 60 26 chrX 43106726 43106894 -123543402 + MTE2b LTR MaLR 51 252 -167 1 913 22 0 0 0 chrX 43107715 43107737 -123542559 + AT_rich Low_complexity Low_complexity 1 22 0 1 913 23 33 0 0 chrX 43108294 43108324 -123541972 + AT_rich Low_complexity Low_complexity 1 30 0 1 913 318 325 58 7 chrX 43108397 43108552 -123541744 + MLT1A LTR MaLR 7 169 -205 1 913 1378 97 10 0 chrX 43108552 43108747 -123541549 + L1_Mus3 LINE L1 6125 6321 -317 1 913 3829 54 0 12 chrX 43108752 43109239 -123541057 + L1Md_T LINE L1 6102 6582 0 1 913 396 0 0 0 chrX 43109273 43109317 -123540979 + (A)n Simple_repeat Simple_repeat 1 44 0 1 913 5516 111 19 4 chrX 43109317 43110158 -123540138 + L1_Mus3 LINE L1 5783 6636 -2 1 913 252 0 0 0 chrX 43110430 43110458 -123539838 + (T)n Simple_repeat Simple_repeat 1 28 0 1 913 22 0 0 0 chrX 43110580 43110602 -123539694 + AT_rich Low_complexity Low_complexity 1 22 0 1 913 21 0 0 0 chrX 43110954 43110975 -123539321 + AT_rich Low_complexity Low_complexity 1 21 0 1 913 381 22 0 0 chrX 43111160 43111206 -123539090 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1 913 249 180 0 0 chrX 43111206 43111256 -123539040 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 913 2221 293 103 53 chrX 43111275 43111687 -123538609 + Lx8 LINE L1 5734 6189 -1284 1 913 297 75 0 0 chrX 43111687 43111727 -123538569 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 913 2221 322 89 56 chrX 43111727 43112712 -123537584 + Lx8 LINE L1 6190 7152 -321 1 913 874 273 95 26 chrX 43112712 43113058 -123537238 - ORR1D1 LTR MaLR -4 370 1 1 913 2221 322 89 56 chrX 43113058 43113249 -123537047 + Lx8 LINE L1 7153 7349 -124 1 913 369 75 0 0 chrX 43113992 43114045 -123536251 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 913 21 0 0 0 chrX 43114494 43114515 -123535781 + AT_rich Low_complexity Low_complexity 1 21 0 1 913 180 0 0 0 chrX 43114804 43114824 -123535472 + (TTTTTA)n Simple_repeat Simple_repeat 3 22 0 1 913 850 280 0 0 chrX 43115348 43115537 -123534759 - B3 SINE B2 -15 201 13 1 913 1431 96 167 0 chrX 43116009 43116248 -123534048 + Lx3_Mus LINE L1 6731 7009 0 1 913 535 174 11 12 chrX 43116539 43116654 -123533642 - ORR1D2 LTR MaLR 0 379 266 1 913 388 327 86 90 chrX 43116822 43116982 -123533314 - ORR1D2 LTR MaLR -122 248 95 1 913 3730 44 0 0 chrX 43116982 43117435 -123532861 - L1Md_F2 LINE L1 -12 6570 6118 1 913 388 327 86 90 chrX 43117435 43117519 -123532777 - ORR1D2 LTR MaLR -276 94 5 1 913 512 332 110 19 chrX 43118095 43119127 -123531169 + L1_Mur3 LINE L1 3676 4807 -1336 1 913 180 111 0 0 chrX 43119127 43119154 -123531142 + (GAATG)n Simple_repeat Simple_repeat 4 30 0 1 913 490 335 139 23 chrX 43119154 43119369 -123530927 + L1_Mur3 LINE L1 4808 5068 -1075 1 913 584 161 85 0 chrX 43119395 43119513 -123530783 - Lx3C LINE L1 -13 6963 6836 1 913 2926 28 0 0 chrX 43119642 43119995 -123530301 - L1Md_F LINE L1 -5399 1120 768 1 913 3146 50 0 8 chrX 43119995 43120397 -123529899 + L1Md_F2 LINE L1 6182 6580 -2 1 913 2355 149 57 5 chrX 43120531 43120968 -123529328 - Lx3C LINE L1 -597 6379 5920 1 913 1396 159 24 4 chrX 43120968 43121113 -123529183 + Lx3C LINE L1 6720 6869 -107 1 913 3308 33 5 0 chrX 43121113 43121507 -123528789 + MTA_Mm LTR MaLR 1 396 0 1 913 1396 159 24 4 chrX 43121507 43121613 -123528683 + Lx3C LINE L1 6870 6975 -1 1 913 510 17 0 0 chrX 43121759 43121818 -123528478 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 913 337 316 35 56 chrX 43121900 43122098 -123528198 - L1MD LINE L1 -2536 5459 5266 1 913 32 26 0 0 chrX 43122568 43122607 -123527689 + AT_rich Low_complexity Low_complexity 1 39 0 1 914 248 354 15 23 chrX 43123060 43123190 -123527106 - MLT1J-int LTR MaLR -908 479 351 1 914 4292 51 0 4 chrX 43123208 43123737 -123526559 - L1Md_F2 LINE L1 -3 6579 6053 1 914 230 274 34 45 chrX 43123751 43123839 -123526457 - MLT1J-int LTR MaLR -1061 326 240 1 914 210 416 35 0 chrX 43124179 43124292 -123526004 - B1F1 SINE Alu -32 117 1 1 914 602 294 22 22 chrX 43124550 43124734 -123525562 + MTC LTR MaLR 4 187 -234 1 914 305 34 68 0 chrX 43125093 43125152 -123525144 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 1 914 3297 192 26 14 chrX 43126192 43126919 -123523377 - L1_Mur1 LINE L1 -2707 3179 2444 1 914 714 245 25 36 chrX 43126954 43127195 -123523101 + Lx3C LINE L1 6633 6886 -123 1 914 7785 113 43 2 chrX 43127192 43128082 -123522214 - Lx3_Mus LINE L1 -164 6845 5923 1 914 224 30 30 0 chrX 43128082 43128115 -123522181 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2 914 7785 113 43 2 chrX 43128115 43128429 -123521867 - Lx3_Mus LINE L1 -1087 5922 5592 1 914 240 86 0 0 chrX 43128490 43128525 -123521771 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2 914 25 51 0 0 chrX 43128546 43128585 -123521711 + AT_rich Low_complexity Low_complexity 1 39 0 2 914 30 45 0 0 chrX 43128600 43128644 -123521652 + AT_rich Low_complexity Low_complexity 1 44 0 2 914 20988 140 38 26 chrX 43128654 43134606 -123515690 - L1_Mus1 LINE L1 0 6567 555 2 914 405 0 0 0 chrX 43135427 43135472 -123514824 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 914 329 358 32 32 chrX 43135590 43135775 -123514521 - B4 SINE B4 -76 216 32 2 914 24 32 0 0 chrX 43136300 43136331 -123513965 + AT_rich Low_complexity Low_complexity 1 31 0 2 914 22 35 0 0 chrX 43136548 43136577 -123513719 + AT_rich Low_complexity Low_complexity 1 29 0 2 914 213 121 0 0 chrX 43137414 43137447 -123512849 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 914 1178 265 63 19 chrX 43137755 43138170 -123512126 + Lx7 LINE L1 5985 6417 -1279 2 914 1649 262 138 31 chrX 43138167 43139036 -123511260 + Lx7 LINE L1 6735 7696 0 2 914 282 29 0 0 chrX 43140645 43140680 -123509616 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 914 589 142 179 0 chrX 43140696 43140802 -123509494 + Lx5 LINE L1 5613 5737 -1313 2 914 539 276 47 8 chrX 43141053 43141181 -123509115 + ETnERV2-int LTR ERVK 7070 7202 -204 2 914 267 93 0 0 chrX 43142383 43142426 -123507870 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2 914 1712 179 31 6 chrX 43142511 43142832 -123507464 - RMER6D LTR ERVK 0 720 392 2 914 544 139 129 0 chrX 43142900 43143001 -123507295 - RMER6D LTR ERVK -603 117 4 2 914 21 100 0 0 chrX 43143304 43143374 -123506922 + AT_rich Low_complexity Low_complexity 1 70 0 2 914 369 0 0 0 chrX 43143583 43143624 -123506672 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 914 225 0 0 0 chrX 43143624 43143648 -123506648 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 914 24 53 0 0 chrX 43143652 43143690 -123506606 + AT_rich Low_complexity Low_complexity 1 38 0 2 914 24 0 0 0 chrX 43144430 43144454 -123505842 + AT_rich Low_complexity Low_complexity 1 24 0 2 914 28 48 0 0 chrX 43144726 43144768 -123505528 + AT_rich Low_complexity Low_complexity 1 42 0 2 914 2726 179 25 17 chrX 43144773 43145302 -123504994 - Lx4A LINE L1 -4 7054 6522 2 914 1456 160 51 27 chrX 43145302 43145598 -123504698 + L1_Mur2 LINE L1 5148 5450 -427 2 914 3637 111 44 2 chrX 43145575 43146117 -123504179 + L1_Mur1 LINE L1 5258 5822 -64 2 914 4699 125 7 4 chrX 43146115 43146828 -123503468 + Lx3A LINE L1 6116 6830 -151 2 914 4959 148 57 31 chrX 43146829 43148537 -123501759 - L1VL2 LINE L1 -1850 1765 4 2 914 721 131 0 0 chrX 43148537 43148644 -123501652 - U6 snRNA snRNA 0 107 1 2 914 31445 89 4 10 chrX 43148672 43154095 -123496201 + L1Md_F2 LINE L1 196 5586 -297 2 914 7635 60 5 2 chrX 43154095 43155088 -123495208 + L1Md_F2 LINE L1 5587 6582 0 2 914 685 211 33 0 chrX 43155103 43155255 -123495041 + L1_Mur2 LINE L1 5426 5582 -295 2 914 1032 264 69 91 chrX 43155646 43155996 -123494300 - ORR1D1 LTR MaLR -2 372 31 2 914 252 77 0 0 chrX 43156113 43156152 -123494144 + (A)n Simple_repeat Simple_repeat 1 39 0 2 914 597 329 93 12 chrX 43156641 43156759 -123493537 - L1MA5 LINE L1 -379 5921 5784 2 914 471 18 0 0 chrX 43156759 43156815 -123493481 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 914 626 325 44 6 chrX 43156815 43157213 -123493083 - L1MA5 LINE L1 -517 5783 5364 2 914 222 37 0 0 chrX 43157217 43157244 -123493052 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2 914 5351 218 25 1 chrX 43157244 43158340 -123491956 - Lx4A LINE L1 -5 7053 5931 2 914 604 289 20 0 chrX 43158424 43158576 -123491720 - URR1B DNA MER1_type -70 155 1 2 914 336 284 0 0 chrX 43158910 43158984 -123491312 + ID2 SINE ID 5 78 -5 2 914 25 65 0 0 chrX 43159411 43159457 -123490839 + AT_rich Low_complexity Low_complexity 1 46 0 2 914 1918 261 70 52 chrX 43159458 43160099 -123490197 - RMER1B Other Other -3 1063 411 2 914 731 265 74 41 chrX 43160109 43160353 -123489943 + ORR1D-int LTR MaLR 284 535 -835 2 914 5383 118 46 6 chrX 43160371 43161099 -123489197 + Lx LINE L1 5780 6523 -131 2 914 378 0 0 0 chrX 43161099 43161141 -123489155 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 914 5383 118 46 6 chrX 43161141 43161246 -123489050 + Lx LINE L1 6524 6645 -9 2 914 612 246 8 30 chrX 43161289 43161423 -123488873 + Lx4B LINE L1 6849 6979 -79 2 914 423 0 0 0 chrX 43161423 43161470 -123488826 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 2 914 1331 303 106 11 chrX 43161501 43161935 -123488361 - ORR1D-int LTR MaLR -296 1074 600 2 914 2731 88 84 16 chrX 43162000 43162426 -123487870 - L1Md_F2 LINE L1 -3 6579 6125 2 914 21 57 0 0 chrX 43162438 43162473 -123487823 + AT_rich Low_complexity Low_complexity 1 35 0 2 914 28 48 0 0 chrX 43162711 43162753 -123487543 + AT_rich Low_complexity Low_complexity 1 42 0 2 914 361 323 23 0 chrX 43162906 43163039 -123487257 + Lx8 LINE L1 7006 7141 -332 2 914 978 190 88 50 chrX 43163092 43163352 -123486944 + RMER6C LTR ERVK 418 687 -3 2 914 5225 191 23 5 chrX 43163354 43164464 -123485832 + Lx2B LINE L1 3131 4260 -1617 2 914 7208 96 1 1 chrX 43164455 43165898 -123484398 + L1_Mus2 LINE L1 5121 6565 -1 2 914 617 193 18 24 chrX 43165941 43166106 -123484190 + Lx2B LINE L1 4514 4677 -1200 2 914 3609 148 98 36 chrX 43166106 43166870 -123483426 + RLTR13C2 LTR ERVK 1 1114 0 2 914 2988 193 32 28 chrX 43166870 43167558 -123482738 + Lx2B LINE L1 4672 5362 -515 2 914 303 111 0 0 chrX 43167558 43167603 -123482693 - L1_Mur1 LINE L1 -1239 4647 4603 2 914 6240 127 61 12 chrX 43167604 43168725 -123481571 - Lx LINE L1 0 6654 5482 2 914 5092 182 3 15 chrX 43168728 43168753 -123481543 - L1_Mur2 LINE L1 -1012 4865 4846 2 914 3455 20 2 0 chrX 43168753 43169148 -123481148 + MTA_Mm LTR MaLR 1 396 0 2 914 9090 34 4 1 chrX 43169148 43170243 -123480053 + MTA_Mm-int LTR MaLR 1 1098 0 2 914 3455 20 2 0 chrX 43170243 43170638 -123479658 + MTA_Mm LTR MaLR 1 396 0 2 914 5092 182 3 15 chrX 43170638 43171623 -123478673 - L1_Mur2 LINE L1 -1032 4845 3867 2 914 6305 167 10 23 chrX 43171623 43172798 -123477498 + Lx2 LINE L1 5838 6997 0 2 914 6707 199 27 10 chrX 43172798 43174419 -123475877 + Lx2B LINE L1 5359 6999 -1 2 914 25 0 0 0 chrX 43174432 43174457 -123475839 + AT_rich Low_complexity Low_complexity 1 25 0 2 914 37 69 0 0 chrX 43174696 43174768 -123475528 + AT_rich Low_complexity Low_complexity 1 72 0 2 914 313 188 24 0 chrX 43175109 43175194 -123475102 + (TA)n Simple_repeat Simple_repeat 1 87 0 2 914 1594 176 40 19 chrX 43175853 43176194 -123474102 + MTC LTR MaLR 1 334 -73 2 914 2649 154 77 125 chrX 43176184 43176505 -123473791 - RLTR21 LTR ERVK -27 1545 1224 2 914 255 103 0 0 chrX 43176505 43176544 -123473752 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 914 2649 154 77 125 chrX 43176544 43176752 -123473544 - RLTR21 LTR ERVK -349 1223 1056 2 914 366 123 0 0 chrX 43176752 43176809 -123473487 + (CATGC)n Simple_repeat Simple_repeat 4 60 0 2 914 2649 154 77 125 chrX 43176809 43176924 -123473372 - RLTR21 LTR ERVK -517 1055 931 2 914 13626 63 0 0 chrX 43176948 43179397 -123470899 + L1Md_F3 LINE L1 4114 6562 -22 2 914 642 372 44 16 chrX 43179422 43179739 -123470557 + MTE2b-int LTR MaLR 575 900 -680 2 914 492 298 0 0 chrX 43179761 43179882 -123470414 - MTE2b LTR MaLR -258 121 1 2 914 546 278 51 28 chrX 43179888 43180066 -123470230 + MTE2b-int LTR MaLR 1392 1573 -7 2 914 697 348 52 17 chrX 43180073 43180360 -123469936 + MTE2b LTR MaLR 1 297 -82 2 914 375 336 40 33 chrX 43180400 43180551 -123469745 - ID_B1 SINE B4 -72 152 1 2 914 278 369 67 31 chrX 43180634 43181127 -123469169 + MER44B DNA MER2_type 4 520 -30 2 914 236 111 22 0 chrX 43181235 43181280 -123469016 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 914 372 333 68 14 chrX 43181475 43181697 -123468599 - L1M4c LINE L1 -4723 1661 1428 2 914 450 0 0 0 chrX 43181755 43181805 -123468491 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 2 914 566 122 0 0 chrX 43181805 43181895 -123468401 - Lx3A LINE L1 -16 6965 6876 2 914 1056 302 74 8 chrX 43181959 43182339 -123467957 - MTD LTR MaLR -14 405 1 2 914 187 330 91 0 chrX 43183050 43183138 -123467158 - L4 LINE RTE -1137 892 797 2 914 303 28 0 0 chrX 43183138 43183174 -123467122 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2 914 1989 181 0 20 chrX 43183174 43183518 -123466778 + RLTR21 LTR ERVK 1 337 -1235 2 914 1300 217 27 30 chrX 43183532 43183806 -123466490 + RLTR21 LTR ERVK 863 1136 -436 2 914 299 113 19 0 chrX 43183806 43183859 -123466437 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 914 1300 217 27 30 chrX 43183859 43183917 -123466379 + RLTR21 LTR ERVK 1137 1193 -379 2 914 397 333 7 0 chrX 43183939 43184074 -123466222 + RLTR21 LTR ERVK 1437 1572 0 2 914 387 0 0 0 chrX 43184283 43184326 -123465970 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 914 1777 258 28 15 chrX 43184752 43185225 -123465071 - Lx6 LINE L1 -2 7458 6980 2 914 28 36 0 35 chrX 43185452 43185484 -123464812 + AT_rich Low_complexity Low_complexity 1 31 0 2 914 2912 150 31 16 chrX 43185484 43185999 -123464297 - Lx LINE L1 -1 6653 6131 2 914 28 36 0 35 chrX 43185999 43186023 -123464273 + AT_rich Low_complexity Low_complexity 1 24 0 2 914 7295 120 45 21 chrX 43187012 43188222 -123462074 - Lx3_Mus LINE L1 -16 6993 5755 2 914 14213 109 21 16 chrX 43188222 43188242 -123462054 - L1_Mur1 LINE L1 -2341 3545 3532 2 914 2972 102 24 49 chrX 43188242 43188736 -123461560 + RLTR45 LTR ERVK 1 482 0 2 914 14213 109 21 16 chrX 43188736 43190982 -123459314 - L1_Mur1 LINE L1 -2355 3531 1265 2 914 206 32 0 31 chrX 43190982 43191014 -123459282 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 914 14213 202 79 34 chrX 43191014 43191972 -123458324 - L1_Mur1 LINE L1 -5720 1264 3 2 914 607 251 35 51 chrX 43192945 43193142 -123457154 + Lx2B LINE L1 6794 6987 -13 2 914 22 0 0 0 chrX 43193495 43193517 -123456779 + AT_rich Low_complexity Low_complexity 1 22 0 2 914 3707 62 19 0 chrX 43193746 43194212 -123456084 + MT2C_Mm LTR ERVL 1 475 0 2 914 2968 195 4 2 chrX 43194535 43195090 -123455206 - Lx LINE L1 -1 6653 6098 2 914 733 228 23 6 chrX 43195162 43195334 -123454962 - Lx4A LINE L1 -13 7045 6871 2 914 1836 179 19 0 chrX 43195336 43195649 -123454647 - ORR1A2 LTR MaLR -8 319 1 2 914 2995 195 35 25 chrX 43195655 43196787 -123453509 - ORR1A2-int LTR MaLR -6 1957 718 2 914 551 191 96 113 chrX 43196748 43196873 -123453423 - MT2B LTR ERVL -315 286 165 2 914 2964 188 44 64 chrX 43196873 43197528 -123452768 - RLTR26 LTR ERVK 0 642 1 2 914 2536 219 71 54 chrX 43197531 43198189 -123452107 - ORR1A2-int LTR MaLR -1219 744 100 2 914 1314 140 89 0 chrX 43198189 43198403 -123451893 - Lx4A LINE L1 -251 6807 6575 2 914 2164 152 16 8 chrX 43198404 43198769 -123451527 - RLTR9A LTR ERVK 0 368 1 2 914 263 164 86 43 chrX 43198770 43198840 -123451456 - ETnERV2-int LTR ERVK -2 7404 7332 2 914 299 271 41 41 chrX 43199049 43199172 -123451124 - ETnERV2-int LTR ERVK -978 6428 6306 2 914 283 158 111 62 chrX 43199272 43199353 -123450943 - ETnERV2-int LTR ERVK -1166 6240 6156 2 914 720 83 18 9 chrX 43199395 43199504 -123450792 - RMER16-int LTR ERVK -1230 4176 4067 2 914 1302 81 16 0 chrX 43199517 43199702 -123450594 - L1_Mus2 LINE L1 -1 6565 6378 3 914 1117 89 17 51 chrX 43199702 43199880 -123450416 + L1_Mus2 LINE L1 6198 6369 -197 3 914 2120 159 84 8 chrX 43199882 43200262 -123450034 - RMER16-int LTR ERVK -1335 4071 3663 2 914 383 181 0 0 chrX 43200290 43200362 -123449934 + L1Md_F2 LINE L1 212 283 -6333 3 914 28542 65 4 1 chrX 43200364 43204101 -123446195 + L1Md_F2 LINE L1 1840 5586 -297 3 914 7991 52 4 0 chrX 43204102 43205090 -123445206 + L1Md_F2 LINE L1 5588 6579 -3 3 914 9838 159 53 54 chrX 43205098 43205487 -123444809 - RMER16-int LTR ERVK -1781 3625 3247 2 914 4379 68 2 16 chrX 43205487 43206059 -123444237 - LTRIS2 LTR ERV1 0 564 1 3 914 9838 171 49 59 chrX 43206059 43208273 -123442023 - RMER16-int LTR ERVK -3311 4095 1566 2 914 254 0 0 0 chrX 43208285 43208315 -123441981 + MTA_Mm LTR MaLR 1 30 -366 3 914 1475 42 5 21 chrX 43208313 43208506 -123441790 + MTA_Mm LTR MaLR 199 388 -8 3 914 4737 161 46 36 chrX 43208710 43209629 -123440667 - RMER16-int LTR ERVK -5215 2191 1274 2 914 986 110 7 7 chrX 43209629 43209775 -123440521 + B1_Mm SINE Alu 1 146 -1 3 914 348 24 0 0 chrX 43209775 43209816 -123440480 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 3 914 4737 161 46 36 chrX 43209816 43209919 -123440377 - RMER16-int LTR ERVK -6133 1273 1159 2 914 189 0 0 0 chrX 43209988 43210009 -123440287 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 3 914 2223 118 55 3 chrX 43210329 43210676 -123439620 - RLTR9A LTR ERVK -3 365 1 3 914 394 171 14 0 chrX 43210676 43210746 -123439550 - Lx4A LINE L1 -479 6579 6509 3 914 1097 102 12 18 chrX 43210814 43210983 -123439313 + B2_Mm2 SINE B2 2 169 -26 3 914 24 0 0 0 chrX 43211714 43211738 -123438558 + AT_rich Low_complexity Low_complexity 1 24 0 3 914 387 53 18 0 chrX 43211850 43211907 -123438389 - B1_Mm SINE Alu 0 147 90 3 914 27 49 0 0 chrX 43212032 43212073 -123438223 + AT_rich Low_complexity Low_complexity 1 41 0 3 914 1933 224 64 51 chrX 43212409 43213000 -123437296 + RMER6D LTR ERVK 1 687 -3 3 914 3386 28 5 0 chrX 43213000 43213394 -123436902 - MTA_Mm LTR MaLR 0 396 1 3 914 335 287 14 22 chrX 43214091 43214230 -123436066 + L1M2 LINE L1 5517 5654 -658 3 914 797 340 27 54 chrX 43214406 43214850 -123435446 - RMER15-int LTR ERVL -20 4979 4548 3 914 4201 149 6 1 chrX 43214873 43215547 -123434749 - RLTR33 LTR ERVK -1 677 1 3 914 962 331 35 20 chrX 43215724 43216066 -123434230 - RMER15-int LTR ERVL -470 4529 4183 3 914 1524 89 84 4 chrX 43216092 43216329 -123433967 - L1_Mus3 LINE L1 -3 6635 6380 3 914 29 28 0 0 chrX 43216496 43216532 -123433764 + AT_rich Low_complexity Low_complexity 1 36 0 3 914 270 56 0 0 chrX 43217021 43217057 -123433239 + (TC)n Simple_repeat Simple_repeat 2 37 0 3 914 305 219 0 9 chrX 43217056 43217171 -123433125 + (TA)n Simple_repeat Simple_repeat 1 114 0 3 914 978 266 86 15 chrX 43218047 43218371 -123431925 + ORR1D1 LTR MaLR 11 357 -17 3 914 398 369 8 0 chrX 43219383 43219505 -123430791 - RSINE1 SINE B4 -38 127 5 3 914 390 42 0 0 chrX 43219573 43219621 -123430675 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 914 22 0 0 0 chrX 43219837 43219859 -123430437 + AT_rich Low_complexity Low_complexity 1 22 0 3 914 24 32 0 0 chrX 43219893 43219924 -123430372 + AT_rich Low_complexity Low_complexity 1 31 0 3 914 4093 191 18 59 chrX 43220262 43221224 -123429072 - L1_Mur2 LINE L1 -59 5818 4897 3 914 727 277 37 47 chrX 43221422 43221718 -123428578 - Lx8 LINE L1 -446 7027 6735 3 914 796 127 77 8 chrX 43222148 43222280 -123428016 + Lx2 LINE L1 6490 6627 -370 3 914 1129 167 4 47 chrX 43222280 43222513 -123427783 + Lx2 LINE L1 6769 6991 -6 3 914 671 189 68 20 chrX 43222513 43222528 -123427768 + Lx2 LINE L1 6282 6296 -340 3 914 22 0 0 0 chrX 43222623 43222645 -123427651 + AT_rich Low_complexity Low_complexity 1 22 0 3 914 4369 115 20 3 chrX 43223920 43224588 -123425708 - L1_Mus4 LINE L1 -261 6375 5716 3 914 225 0 0 0 chrX 43224708 43224733 -123425563 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 3 914 2184 269 102 7 chrX 43224765 43225723 -123424573 + Lx6 LINE L1 6315 7445 -15 3 914 21 36 0 0 chrX 43225723 43225751 -123424545 + AT_rich Low_complexity Low_complexity 1 28 0 3 914 23 0 0 0 chrX 43226531 43226554 -123423742 + AT_rich Low_complexity Low_complexity 1 23 0 3 914 909 136 77 6 chrX 43227398 43227568 -123422728 + L1_Mus1 LINE L1 6386 6567 0 3 914 523 41 0 26 chrX 43227831 43227907 -123422389 + (TA)n Simple_repeat Simple_repeat 2 75 0 3 914 585 319 24 38 chrX 43228260 43228550 -123421746 + Lx8 LINE L1 7185 7470 -3 3 914 7043 162 231 5 chrX 43228857 43229093 -123421203 - L1_Mm LINE L1 -385 5492 5143 3 914 405 0 0 0 chrX 43229093 43229138 -123421158 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 914 7470 137 58 18 chrX 43229138 43230043 -123420253 - L1_Mm LINE L1 -735 5142 3961 3 914 387 0 0 0 chrX 43230043 43230086 -123420210 + (TTA)n Simple_repeat Simple_repeat 3 45 0 3 914 7470 130 13 22 chrX 43230086 43230654 -123419642 - L1_Mm LINE L1 -1909 3974 3404 3 914 1344 212 11 11 chrX 43230657 43230924 -123419372 - RLTR13D3 LTR ERVK -847 267 1 3 914 2386 152 10 12 chrX 43230926 43231331 -123418965 + L1_Mm LINE L1 5379 5782 -101 3 914 7790 100 32 16 chrX 43231414 43233389 -123416907 - L1Md_F3 LINE L1 -21 6563 4491 3 914 1887 38 13 4 chrX 43233349 43233588 -123416708 + L1Md_F3 LINE L1 6313 6553 -31 3 914 407 19 19 0 chrX 43233588 43233640 -123416656 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 914 5320 169 33 3 chrX 43233665 43234635 -123415661 + Lx2 LINE L1 5998 6996 -1 3 914 369 0 0 0 chrX 43234843 43234884 -123415412 + (GA)n Simple_repeat Simple_repeat 1 41 0 3 914 968 370 22 53 chrX 43234900 43235391 -123414905 + ORR1D2-int LTR MaLR 592 1067 -303 3 914 7761 67 1 0 chrX 43235418 43236398 -123413898 + L1_Mus1 LINE L1 5587 6567 0 3 914 407 202 0 130 chrX 43236428 43236536 -123413760 - RMER10A LTR ERVL -62 380 287 3 914 327 65 0 0 chrX 43236584 43236630 -123413666 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 914 1472 120 34 0 chrX 43236818 43237051 -123413245 - L1_Mus4 LINE L1 -1 6635 6395 3 914 769 126 8 0 chrX 43237051 43237170 -123413126 + L1_Mus4 LINE L1 6263 6382 -254 3 914 1358 217 23 84 chrX 43237170 43237513 -123412783 + ORR1D2-int LTR MaLR 1049 1370 0 3 914 983 314 36 3 chrX 43237513 43237871 -123412425 + ORR1D2 LTR MaLR 1 370 0 3 914 504 0 0 0 chrX 43237913 43237969 -123412327 + (TA)n Simple_repeat Simple_repeat 1 56 0 3 914 411 287 123 29 chrX 43238425 43238734 -123411562 + L1M3 LINE L1 3871 4208 -1932 3 914 360 284 121 26 chrX 43238736 43239000 -123411296 + L1M3 LINE L1 5101 5389 -754 3 914 255 329 81 20 chrX 43239037 43239332 -123410964 + L1M3 LINE L1 5452 5764 -536 3 914 21 0 0 0 chrX 43239987 43240008 -123410288 + AT_rich Low_complexity Low_complexity 1 21 0 3 914 276 30 0 0 chrX 43240104 43240137 -123410159 + (TTA)n Simple_repeat Simple_repeat 2 34 0 3 914 1989 347 63 16 chrX 43240175 43240645 -123409651 - Lx9 LINE L1 -206 7438 6969 3 914 339 25 0 0 chrX 43240645 43240685 -123409611 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 914 1989 347 63 16 chrX 43240685 43241237 -123409059 - Lx9 LINE L1 -676 6968 6368 3 914 242 213 26 13 chrX 43241283 43241359 -123408937 + (TA)n Simple_repeat Simple_repeat 1 77 0 3 914 434 375 17 29 chrX 43241431 43241604 -123408692 - B4A SINE B4 -121 171 1 3 914 444 284 188 14 chrX 43241659 43242005 -123408291 + Lx9 LINE L1 7198 7603 -41 3 914 3271 112 33 10 chrX 43242203 43242718 -123407578 - Lx3_Mus LINE L1 -11 6998 6472 3 914 720 127 46 38 chrX 43242718 43242849 -123407447 + Lx3_Mus LINE L1 6362 6493 -516 3 914 351 0 0 0 chrX 43243783 43243822 -123406474 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 3 914 25 0 0 0 chrX 43244021 43244046 -123406250 + AT_rich Low_complexity Low_complexity 1 25 0 3 914 23 0 0 0 chrX 43244949 43244972 -123405324 + AT_rich Low_complexity Low_complexity 1 23 0 3 914 34999 75 3 13 chrX 43245013 43251159 -123399137 - L1Md_F2 LINE L1 -20 6562 487 3 914 1172 354 24 30 chrX 43251754 43252384 -123397912 - Lx8 LINE L1 -119 7354 6729 3 914 494 308 48 21 chrX 43252379 43252568 -123397728 + Lx8 LINE L1 6450 6643 -830 3 915 498 75 0 24 chrX 43253771 43253853 -123396443 - L1Md_F2 LINE L1 -10 6572 6493 3 915 13190 103 6 9 chrX 43253855 43255968 -123394328 - L1_Mus2 LINE L1 -964 6044 3930 3 915 413 306 23 40 chrX 43255968 43256302 -123393994 + L1MA6 LINE L1 4911 5231 -912 3 915 281 285 35 2 chrX 43256460 43256600 -123393696 + L1MA6 LINE L1 5374 5527 -773 3 915 287 219 14 0 chrX 43256656 43256729 -123393567 + Lx9 LINE L1 7395 7468 -176 3 915 281 346 84 14 chrX 43256921 43257360 -123392936 + L1MA6 LINE L1 5528 5997 -303 3 915 696 234 0 14 chrX 43257491 43257638 -123392658 - B1_Mur2 SINE Alu -1 148 4 3 915 4089 121 42 5 chrX 43257826 43258467 -123391829 - Lx3_Mus LINE L1 -19 6990 6326 3 915 27 49 0 0 chrX 43258497 43258538 -123391758 + AT_rich Low_complexity Low_complexity 1 41 0 3 915 376 206 0 0 chrX 43258547 43258615 -123391681 - Lx3_Mus LINE L1 -691 6318 6251 3 915 30 69 0 0 chrX 43258673 43258731 -123391565 + AT_rich Low_complexity Low_complexity 1 58 0 3 915 21 36 0 0 chrX 43258751 43258779 -123391517 + AT_rich Low_complexity Low_complexity 1 28 0 3 915 19789 95 88 3 chrX 43258832 43259706 -123390590 - L1_Mus3 LINE L1 -1 6637 5684 3 915 3298 46 0 2 chrX 43259706 43260119 -123390177 + L1Md_F2 LINE L1 6171 6582 0 3 915 19789 151 14 6 chrX 43260119 43260544 -123389752 - L1_Mus3 LINE L1 -200 5683 5246 3 915 600 84 0 0 chrX 43260544 43260627 -123389669 + (TA)n Simple_repeat Simple_repeat 2 84 0 3 915 19789 151 14 6 chrX 43260627 43263456 -123386840 - L1_Mus3 LINE L1 -638 5245 2405 3 915 307 229 0 0 chrX 43263457 43263518 -123386778 - B1_Mur3 SINE Alu -43 106 46 3 915 21 36 0 0 chrX 43263700 43263728 -123386568 + AT_rich Low_complexity Low_complexity 1 28 0 3 915 232 330 162 0 chrX 43263735 43263914 -123386382 - L2a LINE L2 -6 3420 3213 3 915 1847 244 12 19 chrX 43265019 43265433 -123384863 - MTC LTR MaLR -8 413 3 3 915 21 0 0 0 chrX 43266074 43266095 -123384201 + AT_rich Low_complexity Low_complexity 1 21 0 3 915 929 293 29 19 chrX 43266221 43266534 -123383762 + Lx9 LINE L1 6660 6975 -669 3 915 564 29 0 0 chrX 43267039 43267109 -123383187 + (CA)n Simple_repeat Simple_repeat 2 71 0 3 915 2193 37 4 0 chrX 43267238 43267506 -123382790 + L1Md_A LINE L1 6314 6582 0 3 915 869 305 78 72 chrX 43267554 43268013 -123382283 + Lx8 LINE L1 6639 7100 -373 3 915 5559 149 47 26 chrX 43268474 43269786 -123380510 - L1_Mus4 LINE L1 -545 6091 4766 3 915 558 350 103 14 chrX 43269782 43270208 -123380088 - Lx8 LINE L1 -166 7307 6844 3 915 1270 190 43 43 chrX 43270875 43271227 -123379069 - L1_Mur2 LINE L1 -944 4933 4582 3 915 6437 172 18 42 chrX 43271227 43272357 -123377939 + Lx2B LINE L1 5761 6868 -132 3 915 3985 155 91 89 chrX 43272357 43273262 -123377034 - RMER17A2 LTR ERVK 0 906 1 3 915 6437 172 18 42 chrX 43273262 43273396 -123376900 + Lx2B LINE L1 6869 6995 -5 3 915 22 0 0 0 chrX 43273399 43273421 -123376875 + AT_rich Low_complexity Low_complexity 1 22 0 3 915 24 0 0 0 chrX 43273501 43273525 -123376771 + AT_rich Low_complexity Low_complexity 1 24 0 3 915 26 74 0 0 chrX 43273660 43273714 -123376582 + AT_rich Low_complexity Low_complexity 1 54 0 3 915 21 36 0 0 chrX 43274039 43274067 -123376229 + AT_rich Low_complexity Low_complexity 1 28 0 3 915 207 0 0 0 chrX 43274201 43274224 -123376072 + (A)n Simple_repeat Simple_repeat 1 23 0 4 915 848 238 10 0 chrX 43274376 43274578 -123375718 + Lx4B LINE L1 920 1123 -5963 4 915 9336 5 0 0 chrX 43274575 43275745 -123374551 - L1Md_A LINE L1 -573 6009 4840 4 915 5200 10 2 0 chrX 43275745 43276332 -123373964 + L1Md_A LINE L1 5995 6582 0 4 915 7477 199 46 40 chrX 43276332 43276918 -123373378 + Lx4B LINE L1 1108 1717 -4160 4 915 1200 41 7 0 chrX 43276918 43277063 -123373233 + B1_Mm SINE Alu 2 147 0 4 915 7477 204 45 48 chrX 43277063 43277424 -123372872 + Lx4B LINE L1 1718 2049 -3828 4 915 282 95 0 0 chrX 43277424 43277466 -123372830 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 915 8885 201 45 44 chrX 43277466 43279202 -123371094 + Lx4B LINE L1 2050 3807 -2070 4 915 552 30 0 0 chrX 43279202 43279268 -123371028 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 915 5335 179 20 10 chrX 43279269 43280462 -123369834 + Lx4B LINE L1 4812 6027 -1031 4 915 1895 193 30 44 chrX 43280462 43280797 -123369499 + RLTR31_Mm LTR ERVK 1 344 -217 4 915 4342 158 34 16 chrX 43280797 43281557 -123368739 - Lx LINE L1 -7 6647 5874 4 915 1895 193 30 44 chrX 43281557 43281650 -123368646 + RLTR31_Mm LTR ERVK 345 423 -138 4 915 1257 176 61 0 chrX 43281665 43281899 -123368397 + Lx4B LINE L1 6169 6415 -643 4 915 376 356 113 56 chrX 43282053 43282461 -123367835 + L1ME3 LINE L1 5728 6158 -4 4 915 1207 232 62 96 chrX 43282811 43283413 -123366883 + Lx9 LINE L1 4147 4727 -1120 4 915 2299 233 64 25 chrX 43283650 43284400 -123365896 + Lx9 LINE L1 4752 5530 -317 4 915 282 241 8 45 chrX 43284414 43284523 -123365773 + B1_Mur4 SINE Alu 3 97 -52 4 915 1139 174 18 5 chrX 43284794 43285014 -123365282 - Lx2 LINE L1 -6 6991 6769 4 915 3911 105 12 187 chrX 43285230 43286140 -123364156 + RMER17A LTR ERVK 1 751 0 4 915 490 135 0 0 chrX 43286164 43286238 -123364058 + B1_Mus2 SINE Alu 53 126 -21 4 915 891 293 93 34 chrX 43286242 43286964 -123363332 + Lx9 LINE L1 5641 6483 -1161 4 915 230 275 192 45 chrX 43286965 43287163 -123363133 + MLT-int LTR MaLR 1377 1603 -132 4 915 25 51 0 0 chrX 43287205 43287244 -123363052 + AT_rich Low_complexity Low_complexity 1 39 0 4 915 290 214 0 79 chrX 43287400 43287476 -123362820 + Lx3B LINE L1 6813 6882 -91 4 915 234 306 65 0 chrX 43288106 43288214 -123362082 + L1MB1 LINE L1 5994 6108 -60 4 915 702 235 42 6 chrX 43288408 43288575 -123361721 + RLTR40 LTR ERVK 1 173 -644 4 915 2208 123 0 0 chrX 43288575 43288891 -123361405 - Lx LINE L1 -204 6450 6135 4 915 1053 163 35 5 chrX 43288891 43289094 -123361202 + Lx LINE L1 6439 6647 -7 4 915 573 88 0 0 chrX 43289101 43289181 -123361115 + (GGAA)n Simple_repeat Simple_repeat 3 82 0 4 915 454 179 161 8 chrX 43289181 43289305 -123360991 + RLTR40 LTR ERVK 158 300 -517 4 915 529 254 15 15 chrX 43289317 43289449 -123360847 - B1_Mur4 SINE Alu -1 149 18 4 915 5944 182 37 45 chrX 43289531 43291001 -123359295 - L1_Mur2 LINE L1 -1205 4672 3214 4 915 5416 99 5 7 chrX 43291006 43291771 -123358525 - L1_Mus3 LINE L1 0 6638 5875 4 915 824 331 99 21 chrX 43292310 43292932 -123357364 - Lx8 LINE L1 -470 7003 6313 4 915 23 86 0 0 chrX 43293003 43293061 -123357235 + AT_rich Low_complexity Low_complexity 1 58 0 4 915 402 330 14 32 chrX 43293336 43293552 -123356744 - B3 SINE B2 0 216 5 4 915 27 0 0 0 chrX 43293863 43293890 -123356406 + AT_rich Low_complexity Low_complexity 1 27 0 4 915 23 0 0 0 chrX 43294178 43294201 -123356095 + AT_rich Low_complexity Low_complexity 1 23 0 4 915 240 286 5 48 chrX 43294341 43294451 -123355845 - L1_Rod LINE L1 -233 5644 5512 4 915 27 0 0 0 chrX 43294472 43294499 -123355797 + AT_rich Low_complexity Low_complexity 1 27 0 4 915 233 247 47 12 chrX 43294527 43294613 -123355683 - L1M3 LINE L1 -633 5538 5450 4 915 1496 214 24 29 chrX 43295489 43296123 -123354173 + L1_Mur2 LINE L1 896 1528 -4349 4 915 18708 176 34 8 chrX 43296132 43299983 -123350313 - L1_Mm LINE L1 -442 5441 1492 4 915 3289 41 5 0 chrX 43299983 43300377 -123349919 - MTA_Mm LTR MaLR 0 396 1 4 915 5427 58 6 1 chrX 43300377 43301096 -123349200 - MTA_Mm-int LTR MaLR 0 1098 377 4 915 7357 56 5 31 chrX 43301112 43301990 -123348306 - L1Md_F2 LINE L1 0 6582 5702 4 915 1855 43 13 0 chrX 43301990 43302225 -123348071 + L1Md_F3 LINE L1 6347 6584 0 4 915 7357 56 5 31 chrX 43302225 43302277 -123348019 - L1Md_F2 LINE L1 -881 5701 5678 4 915 414 0 0 0 chrX 43302277 43302323 -123347973 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 4 915 7357 56 5 31 chrX 43302323 43302381 -123347915 - L1Md_F2 LINE L1 -905 5677 5619 4 915 2082 102 0 0 chrX 43302363 43302666 -123347630 - L1_Mm LINE L1 -1075 4808 4506 4 915 5280 160 1 0 chrX 43302660 43303531 -123346765 - L1VL4 LINE L1 -5391 911 40 4 915 411 404 6 6 chrX 43303672 43303839 -123346457 + B3A SINE B2 6 172 -26 4 915 55 80 0 0 chrX 43303959 43304084 -123346212 + AT_rich Low_complexity Low_complexity 1 125 0 4 915 360 43 0 0 chrX 43304295 43304341 -123345955 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 915 582 78 0 0 chrX 43304377 43304454 -123345842 - B2_Mm2 SINE B2 -117 78 2 4 915 303 175 0 0 chrX 43304828 43304885 -123345411 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 915 2619 115 23 3 chrX 43305265 43305657 -123344639 - MTB LTR MaLR 0 400 1 4 915 23 54 0 0 chrX 43305687 43305724 -123344572 + AT_rich Low_complexity Low_complexity 1 37 0 4 915 392 202 105 0 chrX 43305798 43305922 -123344374 + Lx9 LINE L1 7395 7531 -113 4 915 27 29 0 0 chrX 43306551 43306585 -123343711 + AT_rich Low_complexity Low_complexity 1 34 0 4 915 22 0 0 0 chrX 43306596 43306618 -123343678 + AT_rich Low_complexity Low_complexity 1 22 0 4 915 24 32 0 0 chrX 43306655 43306686 -123343610 + AT_rich Low_complexity Low_complexity 1 31 0 4 915 1679 252 51 78 chrX 43307706 43308257 -123342039 + RMER15 LTR ERVL 38 573 -2 4 915 1363 77 16 0 chrX 43308380 43308562 -123341734 + B2_Mm1t SINE B2 1 185 -8 4 915 222 118 0 0 chrX 43308656 43308690 -123341606 + (TC)n Simple_repeat Simple_repeat 1 34 0 4 915 25 0 0 0 chrX 43309282 43309307 -123340989 + AT_rich Low_complexity Low_complexity 1 25 0 4 915 5056 113 9 11 chrX 43309833 43310593 -123339703 + L1_Mus4 LINE L1 5878 6636 0 4 915 22 56 0 0 chrX 43310607 43310643 -123339653 + AT_rich Low_complexity Low_complexity 1 36 0 4 915 401 320 67 64 chrX 43310912 43311170 -123339126 + L1MDb LINE L1 848 1106 -5434 4 915 264 120 0 0 chrX 43311170 43311220 -123339076 + (CAAT)n Simple_repeat Simple_repeat 2 51 0 4 915 326 325 93 129 chrX 43311233 43311512 -123338784 + B4A SINE B4 4 272 -20 4 915 317 24 24 0 chrX 43311551 43311593 -123338703 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 915 19002 22 1 1 chrX 43311691 43313932 -123336364 + L1Md_A LINE L1 3347 5586 -297 4 915 8258 42 0 0 chrX 43313932 43314928 -123335368 + L1Md_A LINE L1 5587 6582 0 4 915 226 271 120 28 chrX 43315258 43315474 -123334822 + L1MDb LINE L1 1701 1936 -4697 4 915 264 219 46 15 chrX 43317091 43317156 -123333140 - RSINE1 SINE B4 -21 144 78 4 915 2268 200 62 12 chrX 43317169 43317484 -123332812 + RMER6A LTR ERVK 1 319 -437 4 915 681 47 0 0 chrX 43317484 43317569 -123332727 + (GA)n Simple_repeat Simple_repeat 2 86 0 4 915 2268 175 51 12 chrX 43317569 43317885 -123332411 + RMER6A LTR ERVK 320 752 -4 4 915 709 351 16 23 chrX 43318224 43318530 -123331766 - Lx8 LINE L1 -132 7341 7038 4 915 28883 14 1 2 chrX 43318546 43322610 -123327686 - L1Md_A LINE L1 0 6582 2527 4 915 210 143 0 0 chrX 43322632 43322681 -123327615 + (T)n Simple_repeat Simple_repeat 1 49 0 4 915 319 301 33 98 chrX 43322896 43322912 -123327384 - Lx8 LINE L1 -475 6998 6986 4 915 3087 139 4 4 chrX 43322912 43323411 -123326885 - Lx LINE L1 0 6654 6156 4 915 319 301 33 98 chrX 43323411 43323578 -123326718 - Lx8 LINE L1 -488 6985 6827 4 915 358 328 163 32 chrX 43323675 43324308 -123325988 - L1MEg LINE L1 -4078 2006 1291 4 915 1126 83 7 0 chrX 43324336 43324481 -123325815 - B1_Mm SINE Alu -1 146 1 4 915 249 262 37 12 chrX 43325421 43325502 -123324794 - L1_Mur3 LINE L1 -441 5439 5357 4 915 209 188 14 28 chrX 43325554 43325625 -123324671 + T-rich Low_complexity Low_complexity 1 70 0 4 915 1048 83 14 0 chrX 43326055 43326199 -123324097 - B1_Mus1 SINE Alu 0 148 3 4 915 22 35 0 0 chrX 43326356 43326385 -123323911 + AT_rich Low_complexity Low_complexity 1 29 0 4 915 549 229 15 30 chrX 43326398 43326533 -123323763 + B1_Mur4 SINE Alu 1 133 -17 4 915 459 0 0 0 chrX 43326550 43326601 -123323695 + (GGAA)n Simple_repeat Simple_repeat 2 52 0 4 915 1934 213 112 20 chrX 43326604 43326705 -123323591 - Lx5 LINE L1 -641 6409 6303 4 915 348 24 0 0 chrX 43326705 43326746 -123323550 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 915 1934 213 112 20 chrX 43326746 43327146 -123323150 - Lx5 LINE L1 -748 6302 5862 4 915 1654 260 11 3 chrX 43327142 43327508 -123322788 + Lx5 LINE L1 6423 6791 -259 4 915 212 59 0 29 chrX 43327517 43327552 -123322744 + (CTG)n Simple_repeat Simple_repeat 2 35 0 4 915 292 319 37 29 chrX 43327568 43327810 -123322486 - L1_Mur3 LINE L1 -2248 3632 3389 4 915 423 0 0 0 chrX 43327817 43327864 -123322432 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 915 1150 326 74 26 chrX 43327938 43328628 -123321668 - Lx8 LINE L1 -29 7444 6722 4 915 2424 240 24 59 chrX 43328725 43329421 -123320875 - Lx6 LINE L1 -1197 6263 5592 4 915 1072 305 64 19 chrX 43329404 43329828 -123320468 + Lx6 LINE L1 6990 7432 -28 4 915 26 0 0 0 chrX 43330828 43330854 -123319442 + AT_rich Low_complexity Low_complexity 1 26 0 4 915 24 53 0 0 chrX 43331324 43331362 -123318934 + AT_rich Low_complexity Low_complexity 1 38 0 4 915 388 260 0 0 chrX 43331405 43331505 -123318791 - L1M2 LINE L1 -642 5670 5571 4 915 17478 81 2 12 chrX 43331522 43334110 -123316186 + L1_Mm LINE L1 1665 4233 -1650 4 915 275 341 0 0 chrX 43334924 43335006 -123315290 + B3A SINE B2 99 180 -18 4 915 456 19 0 0 chrX 43335009 43335062 -123315234 + (TAA)n Simple_repeat Simple_repeat 1 53 0 4 915 3289 75 2 0 chrX 43335095 43335524 -123314772 + L1_Mus1 LINE L1 6137 6566 -1 4 915 221 159 0 0 chrX 43335527 43335571 -123314725 + A-rich Low_complexity Low_complexity 1 44 0 4 915 342 387 67 38 chrX 43336049 43336420 -123313876 + L2 LINE L2 1651 2032 -1387 4 915 2325 102 14 3 chrX 43336584 43336939 -123313357 - L1_Mus3 LINE L1 -1 6637 6279 4 915 1453 213 120 3 chrX 43336996 43337345 -123312951 + ORR1B1 LTR MaLR 5 394 0 4 915 29 78 0 0 chrX 43337638 43337702 -123312594 + AT_rich Low_complexity Low_complexity 1 64 0 4 915 612 121 0 0 chrX 43337823 43337914 -123312382 + 4.5SRNA scRNA scRNA 1 91 -3 4 915 1401 79 16 0 chrX 43337914 43338104 -123312192 + B2_Mm2 SINE B2 1 193 -2 4 915 29 70 0 0 chrX 43338177 43338234 -123312062 + AT_rich Low_complexity Low_complexity 1 57 0 4 915 5388 137 14 5 chrX 43338382 43339706 -123310590 - Lx3_Mus LINE L1 -622 6387 5047 4 915 309 122 69 149 chrX 43339708 43339795 -123310501 - RLTR10D LTR ERVK -56 303 224 5 915 2195 31 0 0 chrX 43339795 43340054 -123310242 - L1Md_F2 LINE L1 -654 5928 5670 5 915 4333 68 3 35 chrX 43340054 43340649 -123309647 - IAP-d-int LTR ERVK -5966 576 1 5 915 2556 96 8 11 chrX 43340649 43341009 -123309287 - RLTR10D LTR ERVK 0 359 1 5 915 8029 34 0 2 chrX 43344098 43345682 -123304614 - L1Md_F2 LINE L1 -13 6569 4989 5 915 9250 107 16 6 chrX 43345680 43347204 -123303092 - Lx3_Mus LINE L1 -13 6996 5451 5 915 32 75 0 0 chrX 43347481 43347548 -123302748 + AT_rich Low_complexity Low_complexity 1 67 0 5 915 377 358 69 17 chrX 43347667 43348071 -123302225 - L2a LINE L2 -254 3172 2743 5 915 326 314 117 66 chrX 43348110 43348502 -123301794 + L1M4 LINE L1 16 427 -6115 5 915 243 88 0 0 chrX 43348867 43348901 -123301395 + (GGGA)n Simple_repeat Simple_repeat 3 36 0 5 915 360 199 157 0 chrX 43349098 43349251 -123301045 + L1MC LINE L1 5567 5759 -2236 5 915 224 143 24 0 chrX 43349253 43349295 -123301001 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 915 297 0 0 0 chrX 43349411 43349444 -123300852 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 5 915 380 161 0 12 chrX 43349609 43349691 -123300605 + (TG)n Simple_repeat Simple_repeat 2 82 0 5 915 825 62 0 0 chrX 43349691 43349803 -123300493 + (GA)n Simple_repeat Simple_repeat 1 112 0 5 915 1082 193 35 0 chrX 43349888 43350090 -123300206 + ORR1B2 LTR MaLR 159 367 0 5 915 651 317 70 0 chrX 43350098 43350524 -123299772 - L1M2 LINE L1 -1365 4778 4323 5 915 24 53 0 0 chrX 43350573 43350611 -123299685 + AT_rich Low_complexity Low_complexity 1 38 0 5 915 25 31 0 0 chrX 43350643 43350675 -123299621 + AT_rich Low_complexity Low_complexity 1 32 0 5 915 448 32 0 16 chrX 43351107 43351170 -123299126 + L1Md_F2 LINE L1 6512 6573 -9 5 915 31 26 0 0 chrX 43353713 43353751 -123296545 + AT_rich Low_complexity Low_complexity 1 38 0 5 915 2332 81 0 3 chrX 43354194 43354517 -123295779 + L1_Mus1 LINE L1 6245 6566 -1 5 915 28 22 0 22 chrX 43355052 43355069 -123295227 + AT_rich Low_complexity Low_complexity 1 17 0 5 915 745 134 28 0 chrX 43355069 43355211 -123295085 - Lx3_Mus LINE L1 0 7009 6864 5 915 28 22 0 22 chrX 43355211 43355239 -123295057 + AT_rich Low_complexity Low_complexity 1 28 0 5 915 22 35 0 0 chrX 43355312 43355341 -123294955 + AT_rich Low_complexity Low_complexity 1 29 0 5 915 802 358 119 12 chrX 43355426 43356031 -123294265 - Lx8 LINE L1 -25 7448 6771 5 915 1040 181 135 0 chrX 43356058 43356273 -123294023 + RMER19C LTR ERVK 1 244 -367 5 915 310 196 98 0 chrX 43356277 43356379 -123293917 + MusHAL1 LINE L1 603 714 -1998 5 915 8730 71 1 1 chrX 43356359 43357526 -123292770 + L1_Mm LINE L1 3371 4537 -1346 5 915 241 33 0 0 chrX 43357527 43357557 -123292739 + L1_Mus1 LINE L1 6086 6115 -452 5 915 302 75 0 0 chrX 43357555 43357595 -123292701 + L1_Mus1 LINE L1 6385 6424 -143 5 915 949 229 108 0 chrX 43357586 43357835 -123292461 + Lx4A LINE L1 6780 7055 -3 5 915 211 203 14 14 chrX 43357931 43358001 -123292295 + CT-rich Low_complexity Low_complexity 3 72 0 5 915 1541 38 5 0 chrX 43358028 43358214 -123292082 + B2_Mm1a SINE B2 2 188 -5 5 915 239 315 23 8 chrX 43358244 43358375 -123291921 - Lx7 LINE L1 -293 7403 7271 5 915 567 311 25 25 chrX 43358412 43358616 -123291680 - Lx7 LINE L1 -963 6733 6530 5 915 477 40 9 7 chrX 43358616 43358684 -123291612 - MTA_Mm-int LTR MaLR -1892 71 1 5 915 3121 66 2 0 chrX 43358684 43359079 -123291217 - MTA_Mm LTR MaLR 0 396 1 5 915 8327 49 12 47 chrX 43359079 43360216 -123290080 - MTA_Mm-int LTR MaLR 0 1098 1 5 915 3319 38 2 0 chrX 43360216 43360611 -123289685 - MTA_Mm LTR MaLR 0 396 1 5 915 31130 96 24 4 chrX 43360611 43366268 -123284028 - L1Md_F2 LINE L1 -437 6145 371 5 915 205 250 41 20 chrX 43366438 43366536 -123283760 + A-rich Low_complexity Low_complexity 3 102 0 5 915 1892 161 138 8 chrX 43366580 43366980 -123283316 - RLTR11B LTR ERVK 0 453 2 5 915 460 317 67 19 chrX 43367045 43367254 -123283042 - Lx7 LINE L1 -619 7077 6859 5 915 286 0 43 43 chrX 43367403 43367449 -123282847 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 5 915 227 79 26 0 chrX 43368899 43368937 -123281359 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 915 271 333 61 55 chrX 43369360 43369525 -123280771 + Lx8 LINE L1 7215 7380 -93 5 915 29 70 0 0 chrX 43369665 43369722 -123280574 + AT_rich Low_complexity Low_complexity 1 57 0 5 915 417 54 0 0 chrX 43369859 43369915 -123280381 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 915 22 35 0 0 chrX 43370623 43370652 -123279644 + AT_rich Low_complexity Low_complexity 1 29 0 5 915 369 0 0 0 chrX 43371655 43371696 -123278600 + (T)n Simple_repeat Simple_repeat 1 41 0 5 915 21 0 0 0 chrX 43372038 43372059 -123278237 + AT_rich Low_complexity Low_complexity 1 21 0 5 915 26 30 0 0 chrX 43373163 43373196 -123277100 + AT_rich Low_complexity Low_complexity 1 33 0 5 915 6409 32 8 0 chrX 43373720 43374578 -123275718 - L1Md_F2 LINE L1 -625 5957 5096 5 915 1673 28 14 0 chrX 43374578 43374791 -123275505 + L1Md_F2 LINE L1 6366 6581 -1 5 915 216 0 0 0 chrX 43375023 43375047 -123275249 + (T)n Simple_repeat Simple_repeat 1 24 0 5 915 274 306 64 58 chrX 43376156 43376312 -123273984 + L1M3 LINE L1 3572 3728 -2412 5 915 279 114 0 0 chrX 43376394 43376438 -123273858 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 915 2940 150 30 4 chrX 43376447 43376977 -123273319 - L1_Mur2 LINE L1 -1364 4513 3970 5 915 4305 244 44 14 chrX 43376966 43377997 -123272299 + Lx5 LINE L1 5982 7045 -5 5 915 222 37 0 0 chrX 43377997 43378024 -123272272 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 5 915 24 0 0 0 chrX 43378069 43378093 -123272203 + AT_rich Low_complexity Low_complexity 1 24 0 5 915 210 293 85 85 chrX 43378402 43378484 -123271812 + B3A SINE B2 2 83 -115 5 915 635 88 29 0 chrX 43378620 43378722 -123271574 + L1_Mus2 LINE L1 6462 6566 0 5 915 324 64 0 0 chrX 43378842 43378889 -123271407 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 915 216 97 0 0 chrX 43378959 43378990 -123271306 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 915 1832 183 21 56 chrX 43379194 43379571 -123270725 - ORR1C1 LTR MaLR 0 378 15 5 915 460 292 61 9 chrX 43379587 43379818 -123270478 + L1M3 LINE L1 3312 3554 -2586 5 915 1222 239 56 16 chrX 43379832 43380151 -123270145 + RMER6D LTR ERVK 334 665 -55 5 915 1797 199 48 5 chrX 43381595 43381973 -123268323 - ORR1B1 LTR MaLR 0 394 1 5 915 22 80 0 0 chrX 43382041 43382091 -123268205 + AT_rich Low_complexity Low_complexity 1 50 0 5 915 24 91 0 0 chrX 43382249 43382315 -123267981 + AT_rich Low_complexity Low_complexity 1 66 0 5 915 22 0 0 0 chrX 43382548 43382570 -123267726 + AT_rich Low_complexity Low_complexity 1 22 0 5 915 640 167 0 0 chrX 43382791 43382893 -123267403 - L1_Mur3 LINE L1 -231 5649 5548 5 915 473 164 0 0 chrX 43382897 43382970 -123267326 + Lx6 LINE L1 6585 6657 -803 5 915 4869 222 30 16 chrX 43382977 43384794 -123265502 - Lx6 LINE L1 -882 6578 4738 5 916 317 371 54 37 chrX 43384928 43385222 -123265074 - L1MB5 LINE L1 -18 6156 5858 5 916 300 373 6 48 chrX 43385383 43385549 -123264747 - MLT1C LTR MaLR -57 410 252 5 916 6456 146 5 4 chrX 43385621 43385633 -123264663 - L1_Mus4 LINE L1 0 6636 6626 5 916 1116 133 0 0 chrX 43385633 43385813 -123264483 + (TTC)n Simple_repeat Simple_repeat 1 180 0 5 916 6743 155 7 2 chrX 43385813 43387762 -123262534 - L1_Mus4 LINE L1 -11 6625 4665 5 916 10309 148 27 10 chrX 43387757 43389634 -123260662 + L1_Mus4 LINE L1 2756 4665 -1218 5 916 29 0 0 0 chrX 43389637 43389666 -123260630 + AT_rich Low_complexity Low_complexity 1 29 0 5 916 438 108 0 0 chrX 43391055 43391120 -123259176 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 916 195 189 0 0 chrX 43391154 43391207 -123259089 + GA-rich Low_complexity Low_complexity 2 54 0 5 916 295 305 15 0 chrX 43391349 43391480 -123258816 + L1_Mur2 LINE L1 4468 4600 -1277 5 916 216 188 21 0 chrX 43391641 43391689 -123258607 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 916 39 38 0 0 chrX 43391797 43391850 -123258446 + AT_rich Low_complexity Low_complexity 1 53 0 5 916 211 344 21 21 chrX 43392302 43392397 -123257899 - MIRb SINE MIR -69 199 105 5 916 1454 199 17 14 chrX 43394585 43394880 -123255416 + Lx4A LINE L1 6762 7057 -1 5 916 308 369 64 0 chrX 43394931 43395072 -123255224 + B3A SINE B2 15 164 -34 5 916 297 75 0 0 chrX 43395076 43395116 -123255180 + (CATA)n Simple_repeat Simple_repeat 4 43 0 5 916 2247 214 44 8 chrX 43395124 43395624 -123254672 - ORR1D1-int LTR MaLR -61 1448 931 5 916 6406 58 5 15 chrX 43395630 43396480 -123253816 - L1Md_F2 LINE L1 -12 6570 5730 5 916 2102 264 35 24 chrX 43396480 43397251 -123253045 - ORR1D1-int LTR MaLR -528 981 1 5 916 797 249 31 67 chrX 43397289 43397505 -123252791 - ORR1D1 LTR MaLR -3 371 164 5 916 189 107 0 0 chrX 43397505 43397533 -123252763 + (CAGA)n Simple_repeat Simple_repeat 2 29 0 5 916 797 249 31 67 chrX 43397533 43397570 -123252726 - ORR1D1 LTR MaLR -211 163 127 5 916 555 43 0 0 chrX 43397581 43397651 -123252645 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 5 916 232 292 27 36 chrX 43397739 43397849 -123252447 - L1M2 LINE L1 -612 5679 5571 5 916 2311 203 70 16 chrX 43397884 43398115 -123252181 + RMER6C LTR ERVK 113 355 -335 5 916 252 77 0 0 chrX 43398115 43398154 -123252142 + (CAGAGA)n Simple_repeat Simple_repeat 4 42 0 5 916 2311 203 70 16 chrX 43398154 43398469 -123251827 + RMER6C LTR ERVK 356 687 -3 5 916 495 0 0 0 chrX 43398619 43398674 -123251622 + (TA)n Simple_repeat Simple_repeat 1 55 0 5 916 259 282 76 45 chrX 43398679 43398902 -123251394 - L1M2 LINE L1 -780 5363 5134 5 916 961 313 32 29 chrX 43399084 43399400 -123250896 + MTE2b LTR MaLR 63 379 0 5 916 404 302 58 104 chrX 43399468 43399937 -123250359 - L1M2 LINE L1 -1342 4801 4355 5 916 5002 114 23 0 chrX 43400263 43401010 -123249286 - L1_Mus4 LINE L1 -5 6631 5868 5 916 775 306 85 24 chrX 43401428 43401971 -123248325 - L1MA10 LINE L1 -41 6293 5718 5 916 1822 57 37 0 chrX 43402132 43402376 -123247920 + L1Md_F3 LINE L1 6318 6570 -14 5 916 592 282 73 69 chrX 43402396 43402859 -123247437 + Lx2A1 LINE L1 4814 5282 -598 5 916 1011 113 0 0 chrX 43402859 43403001 -123247295 + B1_Mus1 SINE Alu 1 142 -6 5 916 592 298 39 87 chrX 43403001 43403232 -123247064 + Lx2A1 LINE L1 5226 5469 -414 5 916 445 270 56 31 chrX 43403236 43403431 -123246865 + Lx2A1 LINE L1 5674 5878 -1130 5 916 289 340 9 28 chrX 43403496 43403605 -123246691 - ID_B1 SINE B4 -1 223 117 5 916 435 19 0 0 chrX 43403664 43403716 -123246580 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 916 450 291 142 22 chrX 43404085 43404401 -123245895 + L1M3 LINE L1 4580 4933 -1207 6 916 2272 174 152 77 chrX 43404440 43405076 -123245220 + RMER6C LTR ERVK 7 690 0 6 916 824 79 150 8 chrX 43405288 43405415 -123244881 + B1_Mm SINE Alu 2 146 -1 6 916 218 39 77 19 chrX 43405415 43405467 -123244829 + (CAAA)n Simple_repeat Simple_repeat 1 55 0 6 916 26 88 0 0 chrX 43405739 43405807 -123244489 + AT_rich Low_complexity Low_complexity 1 68 0 6 916 284 83 0 20 chrX 43405921 43405970 -123244326 + (TA)n Simple_repeat Simple_repeat 2 49 0 6 916 634 179 16 0 chrX 43406618 43406741 -123243555 - Lx9 LINE L1 -157 7487 7363 6 916 400 193 0 35 chrX 43406757 43406870 -123243426 + Lx9 LINE L1 7536 7644 0 6 916 23 22 0 61 chrX 43406900 43406949 -123243347 + AT_rich Low_complexity Low_complexity 1 46 0 6 916 361 314 48 0 chrX 43407449 43407573 -123242723 - B1F2 SINE Alu -10 139 10 6 916 347 331 37 24 chrX 43408950 43409114 -123241182 - MER20 DNA MER1_type -5 214 49 6 916 29 90 0 0 chrX 43409455 43409533 -123240763 + AT_rich Low_complexity Low_complexity 1 78 0 6 916 201 132 0 0 chrX 43409653 43409691 -123240605 + (TA)n Simple_repeat Simple_repeat 1 38 0 6 916 462 319 38 6 chrX 43410190 43410373 -123239923 - Lx8 LINE L1 -1024 6449 6261 6 916 718 281 59 7 chrX 43410663 43410935 -123239361 - Lx7 LINE L1 -1777 5919 5634 6 916 1606 264 75 74 chrX 43411528 43412121 -123238175 + L1_Rod LINE L1 918 1500 -4347 6 916 210 118 0 0 chrX 43412121 43412155 -123238141 + (CATA)n Simple_repeat Simple_repeat 2 35 0 6 916 1606 249 68 91 chrX 43412155 43412743 -123237553 + L1_Rod LINE L1 1501 2094 -3753 6 916 293 192 49 49 chrX 43412747 43412829 -123237467 + L1_Mur3 LINE L1 4621 4702 -1178 6 916 396 101 0 0 chrX 43412885 43412954 -123237342 + Lx3A LINE L1 6903 6971 -10 6 916 416 19 19 0 chrX 43413840 43413893 -123236403 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 6 916 239 383 39 8 chrX 43413908 43414037 -123236259 - ID_B1 SINE B4 -10 214 82 6 916 22 35 0 0 chrX 43414653 43414682 -123235614 + AT_rich Low_complexity Low_complexity 1 29 0 6 916 560 214 8 0 chrX 43414682 43414799 -123235497 - Lx9 LINE L1 -747 6897 6780 6 916 189 0 0 0 chrX 43414804 43414825 -123235471 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 916 350 137 69 29 chrX 43414826 43414999 -123235297 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 916 2328 246 80 91 chrX 43415034 43415445 -123234851 - Lx9 LINE L1 -282 7362 6984 6 916 1076 82 7 0 chrX 43415445 43415592 -123234704 - B1_Mus1 SINE Alu 0 148 1 6 916 2328 246 80 91 chrX 43415592 43416060 -123234236 - Lx9 LINE L1 -661 6983 6493 6 916 4541 236 61 45 chrX 43416062 43416479 -123233817 - Lx9 LINE L1 -1625 6019 5542 6 916 216 0 0 0 chrX 43416479 43416503 -123233793 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 6 916 4541 234 73 46 chrX 43416503 43417825 -123232471 - Lx9 LINE L1 -306 5541 4206 6 916 675 288 20 135 chrX 43418409 43418802 -123231494 + L1VL1 LINE L1 15 362 -6060 6 916 360 288 19 12 chrX 43418874 43419036 -123231260 + L1VL4 LINE L1 671 833 -5783 6 916 728 169 42 0 chrX 43419015 43419157 -123231139 + L1VL4 LINE L1 725 872 -5744 6 916 16527 128 5 3 chrX 43419379 43422375 -123227921 + L1VL4 LINE L1 864 3866 -2017 6 916 1502 193 7 0 chrX 43422378 43422684 -123227612 + L1Md_F LINE L1 723 1030 -5489 6 916 874 281 97 73 chrX 43422683 43423300 -123226996 - L1Md_F LINE L1 -5821 698 67 6 916 3482 152 43 9 chrX 43423343 43423711 -123226585 - L1_Mur2 LINE L1 -3440 2437 2061 6 916 462 36 0 0 chrX 43423711 43423767 -123226529 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 916 3482 152 43 9 chrX 43423767 43424051 -123226245 - L1_Mur2 LINE L1 -3817 2060 1764 6 916 2637 103 8 0 chrX 43424049 43424426 -123225870 - L1_Mus4 LINE L1 -651 5985 5606 6 916 1028 151 0 0 chrX 43424428 43424614 -123225682 - L1_Mur2 LINE L1 -4164 1713 1528 6 916 665 131 0 0 chrX 43424607 43424706 -123225590 + Lx3B LINE L1 6711 6809 -164 6 916 400 159 14 0 chrX 43424707 43424776 -123225520 + L1_Mur2 LINE L1 1776 1845 -4032 6 916 627 221 42 18 chrX 43424765 43424931 -123225365 + Lx3B LINE L1 6803 6972 -1 6 916 2374 166 25 5 chrX 43424953 43425626 -123224670 - L1_Mur2 LINE L1 -4333 1544 858 6 916 7869 162 8 18 chrX 43425621 43427201 -123223095 + Lx3C LINE L1 5410 6969 -7 6 916 2600 122 17 5 chrX 43427238 43427641 -123222655 + Lx3A LINE L1 6561 6968 -13 6 916 258 32 0 0 chrX 43427641 43427672 -123222624 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 6 916 31 26 0 0 chrX 43427691 43427729 -123222567 + AT_rich Low_complexity Low_complexity 1 38 0 6 916 252 0 0 0 chrX 43427766 43427794 -123222502 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 6 916 374 357 69 45 chrX 43427799 43428044 -123222252 + MLT2B2 LTR ERVL 228 532 -22 6 916 501 17 0 0 chrX 43428227 43428285 -123222011 + (TA)n Simple_repeat Simple_repeat 2 59 0 6 916 9626 102 34 13 chrX 43428312 43429858 -123220438 + MusHAL1 LINE L1 395 1972 -740 6 916 363 343 19 0 chrX 43429935 43430043 -123220253 + B3A SINE B2 8 117 -81 6 916 1019 251 9 13 chrX 43430044 43430270 -123220026 - URR1B DNA MER1_type 0 225 1 6 916 414 0 0 0 chrX 43430767 43430813 -123219483 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 916 504 32 0 0 chrX 43430813 43430874 -123219422 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 916 8059 39 2 7 chrX 43430898 43431898 -123218398 + L1Md_F2 LINE L1 5587 6581 -1 6 916 200 217 0 0 chrX 43431950 43431996 -123218300 + T-rich Low_complexity Low_complexity 4 49 0 6 916 1041 73 7 0 chrX 43432408 43432544 -123217752 + B1_Mm SINE Alu 2 138 -9 6 916 285 29 0 0 chrX 43432544 43432578 -123217718 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 6 916 26 50 0 0 chrX 43432734 43432774 -123217522 + AT_rich Low_complexity Low_complexity 1 40 0 6 916 1481 271 38 19 chrX 43432915 43433288 -123217008 - ORR1C2 LTR MaLR -4 380 1 6 916 2036 317 144 24 chrX 43433320 43434515 -123215781 - Lx8 LINE L1 -2 7471 6134 6 916 339 25 0 0 chrX 43434518 43434558 -123215738 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 916 706 299 54 18 chrX 43434612 43435049 -123215247 - Lx8 LINE L1 -1542 5931 5508 6 916 2117 120 9 21 chrX 43435118 43435449 -123214847 - ORR1A2 LTR MaLR 0 327 1 6 916 1100 239 17 38 chrX 43435597 43435889 -123214407 + Lx9 LINE L1 5478 5763 -84 6 916 396 125 0 0 chrX 43435895 43435959 -123214337 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 916 559 294 79 8 chrX 43435959 43436199 -123214097 + Lx9 LINE L1 5810 6066 -1578 6 916 355 274 52 82 chrX 43436617 43436789 -123213507 - L1MA8 LINE L1 -342 5949 5713 6 916 1405 195 3 84 chrX 43436789 43437147 -123213149 - ORR1A4 LTR MaLR 0 329 1 6 916 355 274 52 82 chrX 43437147 43437244 -123213052 - L1MA8 LINE L1 -511 5780 5625 6 916 268 88 35 0 chrX 43437245 43437302 -123212994 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 6 916 528 16 0 0 chrX 43437358 43437419 -123212877 + (TA)n Simple_repeat Simple_repeat 2 62 0 6 916 232 91 45 0 chrX 43437661 43437705 -123212591 + (GA)n Simple_repeat Simple_repeat 2 47 0 6 916 404 320 77 50 chrX 43437821 43438239 -123212057 - L1MA8 LINE L1 -606 5241 4813 6 916 210 147 0 0 chrX 43438542 43438576 -123211720 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 6 916 930 210 5 26 chrX 43438576 43438767 -123211529 + RLTR17 LTR ERVK 124 310 -382 6 916 264 130 0 0 chrX 43440232 43440278 -123210018 + (GA)n Simple_repeat Simple_repeat 2 47 0 6 916 288 120 0 0 chrX 43440275 43440325 -123209971 + (GGA)n Simple_repeat Simple_repeat 2 51 0 6 916 2807 70 5 18 chrX 43440375 43440765 -123209531 - MTA_Mm LTR MaLR 0 396 12 6 916 6559 90 44 72 chrX 43440746 43441864 -123208432 - MTA_Mm-int LTR MaLR -11 1087 1 6 916 2867 62 62 0 chrX 43441864 43442237 -123208059 - MTA_Mm LTR MaLR 0 396 1 6 916 296 48 24 0 chrX 43442280 43442322 -123207974 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 916 990 96 0 0 chrX 43442323 43442458 -123207838 - B1_Mus1 SINE Alu -12 136 2 6 916 5565 43 13 0 chrX 43443965 43444655 -123205641 + L1Md_F3 LINE L1 5872 6570 -14 6 916 15026 168 16 30 chrX 43445365 43449185 -123201111 + L1_Mus3 LINE L1 265 4028 -1855 6 916 6715 117 48 2 chrX 43449174 43450734 -123199562 + L1_Mus3 LINE L1 5002 6633 -5 6 916 1582 196 52 116 chrX 43451330 43451751 -123198545 - ORR1B1 LTR MaLR 0 394 1 6 916 225 291 11 85 chrX 43452386 43452480 -123197816 + MIRc SINE MIR 69 155 -113 6 916 22 0 0 0 chrX 43453883 43453905 -123196391 + AT_rich Low_complexity Low_complexity 1 22 0 6 916 5016 108 15 0 chrX 43453906 43454636 -123195660 - L1_Mus3 LINE L1 -7 6631 5891 6 916 1428 120 44 0 chrX 43454658 43454883 -123195413 + L1Md_F2 LINE L1 6348 6582 0 6 916 3590 155 10 2 chrX 43454894 43455503 -123194793 - L1_Mm LINE L1 -86 5797 5184 6 916 5611 163 21 18 chrX 43455506 43456291 -123194005 - L1_Mm LINE L1 -1384 4499 3707 6 916 435 78 0 0 chrX 43456291 43456355 -123193941 + (TTTA)n Simple_repeat Simple_repeat 3 66 0 6 916 977 82 8 0 chrX 43456355 43456489 -123193807 - B1_Mm SINE Alu -12 135 1 6 916 5611 163 21 18 chrX 43456489 43456789 -123193507 - L1_Mm LINE L1 -2177 3706 3410 6 916 377 120 83 12 chrX 43456789 43456873 -123193423 - L1_Mus2 LINE L1 0 6566 6477 6 916 5611 163 21 18 chrX 43456873 43456932 -123193364 - L1_Mm LINE L1 -2474 3409 3352 6 916 1158 224 32 0 chrX 43456932 43457182 -123193114 - RLTR22_Mur LTR ERVK 0 1848 1591 6 916 5512 113 5 0 chrX 43457418 43458239 -123192057 - RLTR22_Mus LTR ERVK -983 825 1 6 916 1933 99 14 0 chrX 43458240 43458534 -123191762 - MusHAL1 LINE L1 -561 2151 1854 6 916 458 71 0 0 chrX 43458543 43458613 -123191683 - L1Md_F3 LINE L1 -16 6568 6499 6 916 4085 78 19 0 chrX 43458613 43459693 -123190603 + L1Md_F2 LINE L1 611 1715 -4168 6 916 7330 57 14 2 chrX 43459690 43460630 -123189666 + L1Md_F2 LINE L1 4637 5587 -296 6 916 7719 62 3 2 chrX 43460631 43461624 -123188672 + L1Md_F2 LINE L1 5589 6582 0 6 916 435 243 0 93 chrX 43461625 43461743 -123188553 - ID_B1 SINE B4 -7 217 111 6 916 608 302 7 0 chrX 43462093 43462232 -123188064 + ID_B1 SINE B4 84 223 -1 6 916 29067 65 11 5 chrX 43462343 43466237 -123184059 + L1Md_F2 LINE L1 1719 5976 -298 6 916 7525 65 3 10 chrX 43466238 43467227 -123183069 + L1Md_F2 LINE L1 5978 6959 -14 6 916 668 297 62 4 chrX 43467252 43467492 -123182804 - RodERV21-int LTR ERV1 -4008 983 730 6 916 222 37 0 0 chrX 43468482 43468509 -123181787 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 916 1126 190 23 0 chrX 43468634 43468850 -123181446 + RLTR12A LTR ERVK 344 564 -4 6 916 1566 162 53 61 chrX 43468866 43469227 -123181069 - RLTR15 LTR ERVK -1 358 1 6 916 420 111 0 0 chrX 43471631 43471694 -123178602 + (TC)n Simple_repeat Simple_repeat 2 64 0 6 916 390 91 0 0 chrX 43471697 43471752 -123178544 + (TATG)n Simple_repeat Simple_repeat 2 56 0 6 916 376 250 60 69 chrX 43471995 43472111 -123178185 - Lx9 LINE L1 -1044 6600 6486 6 916 189 0 0 0 chrX 43472118 43472139 -123178157 + (T)n Simple_repeat Simple_repeat 1 21 0 6 916 1975 148 78 0 chrX 43472889 43473234 -123177062 - Lx2 LINE L1 -1 6996 6625 6 916 2279 146 14 0 chrX 43473234 43473598 -123176698 + Lx2 LINE L1 6254 6622 -375 6 916 1967 261 54 34 chrX 43473602 43474590 -123175706 - Lx9 LINE L1 -1160 6484 5441 6 916 3411 254 63 3 chrX 43474593 43475576 -123174720 + Lx9 LINE L1 6603 7644 0 6 916 1171 256 52 16 chrX 43475836 43476142 -123174154 + MTD LTR MaLR 13 329 -90 7 916 230 275 24 24 chrX 43476209 43476291 -123174005 - MTD LTR MaLR -2 417 336 7 916 1203 54 0 0 chrX 43476761 43476908 -123173388 + B1_Mus2 SINE Alu 1 147 0 7 916 408 40 0 0 chrX 43476910 43476960 -123173336 + (GGA)n Simple_repeat Simple_repeat 3 52 0 7 916 347 359 42 0 chrX 43477512 43477654 -123172642 - B1F SINE Alu -1 148 1 7 916 737 206 14 0 chrX 43479154 43479295 -123171001 - B1_Mur4 SINE Alu -7 143 1 7 916 804 50 0 0 chrX 43479384 43479485 -123170811 + (TA)n Simple_repeat Simple_repeat 1 101 0 7 916 409 245 51 97 chrX 43479725 43479901 -123170395 + RLTR8 LTR ERVK 208 375 0 7 916 249 208 0 38 chrX 43481822 43481902 -123168394 + L1M1 LINE L1 5757 5833 -467 7 916 1098 307 58 60 chrX 43482424 43482784 -123167512 - Lx8 LINE L1 -852 6621 6251 7 916 1525 211 43 59 chrX 43482784 43483157 -123167139 + ORR1B2 LTR MaLR 1 367 0 7 916 1098 326 50 69 chrX 43483157 43483451 -123166845 - Lx8 LINE L1 -1223 6250 5974 7 916 2902 98 2 15 chrX 43483705 43484117 -123166179 - MTB_Mm LTR MaLR 0 407 1 7 916 3154 260 29 52 chrX 43484900 43485912 -123164384 + Lx7 LINE L1 6444 7431 -265 7 916 381 255 46 26 chrX 43485951 43486104 -123164192 + Lx7 LINE L1 7541 7696 0 7 916 1237 278 96 65 chrX 43487079 43487768 -123162528 - Lx9 LINE L1 -9 7635 6926 7 916 198 128 0 0 chrX 43488038 43488077 -123162219 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 7 916 698 358 139 8 chrX 43488079 43488589 -123161707 + Lx9 LINE L1 6344 6920 -724 7 916 493 347 48 9 chrX 43488788 43489015 -123161281 + MLT1B LTR MaLR 61 296 -94 7 916 292 320 55 61 chrX 43489342 43489511 -123160785 + ORR1D-int LTR MaLR 693 965 -615 7 916 29 47 0 0 chrX 43489569 43489612 -123160684 + AT_rich Low_complexity Low_complexity 1 43 0 7 916 219 278 154 18 chrX 43489636 43489746 -123160550 - MIRb SINE MIR -52 216 92 7 916 21 71 0 0 chrX 43489759 43489801 -123160495 + AT_rich Low_complexity Low_complexity 1 42 0 7 916 33 73 0 0 chrX 43489859 43489927 -123160369 + AT_rich Low_complexity Low_complexity 1 68 0 7 916 22 70 0 0 chrX 43490191 43490234 -123160062 + AT_rich Low_complexity Low_complexity 1 43 0 7 916 2080 108 13 3 chrX 43490650 43490967 -123159329 - RLTR46 LTR ERVK 0 320 1 7 916 14855 218 22 9 chrX 43490967 43494206 -123156090 - IAPEY3-int LTR ERVK 0 7680 4402 7 916 9475 234 24 2 chrX 43494205 43496313 -123153983 - IAPEY3-int LTR ERVK -4648 3032 880 7 916 264 143 0 0 chrX 43496315 43496357 -123153939 - IAPEY3-int LTR ERVK -7393 287 246 7 916 400 231 58 155 chrX 43496392 43496669 -123153627 - IAPEY3-int LTR ERVK -7428 252 3 7 916 334 148 0 0 chrX 43496671 43496725 -123153571 - RLTR46 LTR ERVK 0 320 267 7 916 298 71 0 0 chrX 43496748 43496790 -123153506 - RLTR46 LTR ERVK -278 42 1 7 916 652 258 8 8 chrX 43497251 43497384 -123152912 - B3 SINE B2 -2 214 82 7 916 7354 130 4 1 chrX 43497464 43499021 -123151275 - L1_Mus4 LINE L1 0 6636 5076 7 916 4955 51 3 8 chrX 43499042 43499669 -123150627 - L1Md_F3 LINE L1 0 6584 5961 7 916 2673 54 0 0 chrX 43499669 43500000 -123150296 + L1_Mm LINE L1 5202 5532 -351 7 916 3083 36 0 0 chrX 43500000 43500413 -123149883 + L1Md_F3 LINE L1 5533 5945 -639 1 916 3765 184 22 52 chrX 43500413 43501234 -123149062 - L1_Mm LINE L1 -855 5028 4233 2 916 1745 196 19 0 chrX 43501237 43501549 -123148747 - L1VL4 LINE L1 -5980 322 5 3 916 21 57 0 0 chrX 43501595 43501630 -123148666 + AT_rich Low_complexity Low_complexity 1 35 0 4 916 348 391 14 0 chrX 43501851 43501989 -123148307 + ID_B1 SINE B4 8 147 -77 5 916 202 219 26 52 chrX 43502907 43502984 -123147312 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 6 916 30 27 0 0 chrX 43503125 43503162 -123147134 + AT_rich Low_complexity Low_complexity 1 37 0 7 916 1968 183 7 44 chrX 43503205 43503611 -123146685 + RMER10B LTR ERVL 3 393 -5 8 916 317 258 136 8 chrX 43503617 43503658 -123146638 + L1MEf LINE L1 2028 2070 -4130 9 916 267 31 0 0 chrX 43503658 43503690 -123146606 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 916 317 258 136 8 chrX 43503690 43503773 -123146523 + L1MEf LINE L1 2071 2168 -4032 9 916 21 71 0 0 chrX 43503777 43503819 -123146477 + AT_rich Low_complexity Low_complexity 1 42 0 1 916 673 259 63 126 chrX 43503877 43504201 -123146095 + ORR1D1 LTR MaLR 1 322 -52 1 916 1174 55 7 0 chrX 43504201 43504347 -123145949 + B1_Mus1 SINE Alu 2 148 0 1 916 673 259 63 126 chrX 43504347 43504419 -123145877 + ORR1D1 LTR MaLR 323 372 -2 1 916 783 161 0 0 chrX 43504478 43504658 -123145638 + GA-rich Low_complexity Low_complexity 1 180 0 1 916 261 360 11 0 chrX 43504756 43504845 -123145451 + ID_B1 SINE B4 127 216 -8 5 916 237 241 45 22 chrX 43507102 43507160 -123143136 - Lx9 LINE L1 -54 7590 7533 1 916 252 0 0 0 chrX 43507160 43507188 -123143108 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 916 237 241 45 22 chrX 43507188 43507218 -123143078 - Lx9 LINE L1 -112 7532 7500 1 916 21 82 0 0 chrX 43507590 43507639 -123142657 + AT_rich Low_complexity Low_complexity 1 49 0 1 916 4255 92 12 0 chrX 43507678 43508257 -123142039 + L1_Mus2 LINE L1 5981 6566 0 1 916 301 0 0 0 chrX 43509256 43509291 -123141005 + U2 snRNA snRNA 4 38 -150 1 916 4633 117 30 61 chrX 43509838 43510502 -123139794 + MusHAL1 LINE L1 3 643 -2711 2 916 243 61 0 0 chrX 43510502 43510535 -123139761 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 916 5354 88 26 0 chrX 43510535 43511351 -123138945 + MusHAL1 LINE L1 643 1478 -1875 2 916 2473 90 46 0 chrX 43511648 43511994 -123138302 - L1_Mus1 LINE L1 -36 6531 6170 2 916 415 274 24 6 chrX 43512004 43512173 -123138123 - L1_Mur3 LINE L1 -480 5400 5229 2 916 274 308 58 8 chrX 43512325 43512606 -123137690 - L1_Rod LINE L1 -4372 1475 1178 2 916 1590 69 5 0 chrX 43512715 43512931 -123137365 - L1Md_F2 LINE L1 0 6582 6366 2 916 4769 39 0 0 chrX 43512931 43513496 -123136800 + L1Md_F2 LINE L1 5758 6322 -260 2 916 209 33 0 32 chrX 43513597 43513628 -123136668 + (TCTCCC)n Simple_repeat Simple_repeat 3 32 0 2 916 536 194 74 0 chrX 43514191 43514299 -123135997 - RMER20A LTR ERVK -400 116 1 2 916 2000 60 0 4 chrX 43514603 43514869 -123135427 - L1Md_F2 LINE L1 -1 6581 6317 2 916 3085 148 27 13 chrX 43514883 43515439 -123134857 - Lx2 LINE L1 -6 6991 6428 2 917 231 270 0 0 chrX 43516614 43516677 -123133619 - L1M2 LINE L1 -368 5932 5870 3 917 530 154 76 9 chrX 43517147 43517252 -123133044 - RMER19B LTR ERVK 0 902 791 3 917 5424 140 54 15 chrX 43517613 43518534 -123131762 + RMER17B LTR ERVK 2 958 0 3 917 369 197 0 0 chrX 43518834 43518910 -123131386 + (TA)n Simple_repeat Simple_repeat 2 77 0 3 917 4345 125 121 33 chrX 43518956 43519773 -123130523 - RMER17D LTR ERVK 0 889 1 3 917 219 69 0 0 chrX 43519934 43519963 -123130333 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 3 917 34 24 0 0 chrX 43521581 43521622 -123128674 + AT_rich Low_complexity Low_complexity 1 41 0 3 917 1243 316 97 16 chrX 43521623 43522250 -123128046 + Lx8 LINE L1 6795 7472 -1 3 917 7553 125 34 32 chrX 43522259 43523962 -123126334 + Lx3_Mus LINE L1 5317 7009 0 3 917 1037 113 0 0 chrX 43524338 43524479 -123125817 + B1_Mus2 SINE Alu 1 141 -6 3 917 26 30 0 0 chrX 43524907 43524940 -123125356 + AT_rich Low_complexity Low_complexity 1 33 0 4 917 3606 61 23 0 chrX 43524943 43525416 -123124880 + L1_Mus2 LINE L1 6083 6566 0 4 917 23 33 0 0 chrX 43525522 43525552 -123124744 + AT_rich Low_complexity Low_complexity 1 30 0 4 917 262 290 50 14 chrX 43525614 43525754 -123124542 + L1M4 LINE L1 4531 4675 -1471 4 917 458 335 46 0 chrX 43526385 43526537 -123123759 + RSINE1 SINE B4 7 165 0 4 917 2349 44 0 7 chrX 43526760 43527098 -123123198 + L1Md_F3 LINE L1 6278 6584 0 4 917 1051 88 0 7 chrX 43527098 43527247 -123123049 + B1_Mus1 SINE Alu 1 148 0 4 917 245 19 55 55 chrX 43527247 43527258 -123123038 + (CAAAA)n Simple_repeat Simple_repeat 4 14 0 4 917 847 304 46 27 chrX 43527512 43527884 -123122412 + MTEb LTR MaLR 1 379 0 4 917 235 254 63 0 chrX 43528074 43528137 -123122159 - L1MC4a LINE L1 -89 7793 7727 4 917 444 99 0 0 chrX 43528225 43528296 -123122000 + (CA)n Simple_repeat Simple_repeat 2 72 0 5 917 263 286 83 0 chrX 43529333 43529417 -123120879 - L3 LINE CR1 -1012 3477 3387 5 917 268 305 0 62 chrX 43530139 43530251 -123120045 + B3A SINE B2 6 110 -88 5 917 459 201 18 12 chrX 43531256 43531422 -123118874 - Lx9 LINE L1 -1 7643 7477 5 917 301 224 24 0 chrX 43531425 43531510 -123118786 + HAL1-2a_MD LINE L1 2433 2519 -505 5 917 3812 249 47 18 chrX 43531510 43532559 -123117737 - Lx9 LINE L1 -127 7517 6439 5 917 871 88 44 0 chrX 43534107 43534244 -123116052 - L1Md_F3 LINE L1 -14 6570 6428 5 917 1413 242 38 22 chrX 43534251 43534658 -123115638 - L1MB5 LINE L1 -348 5826 5417 5 917 321 192 19 14 chrX 43534664 43534746 -123115550 - L1MB5 LINE L1 -431 5446 5367 5 917 281 24 49 0 chrX 43534748 43534789 -123115507 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 5 917 228 86 0 0 chrX 43534876 43534911 -123115385 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 5 917 3884 195 58 9 chrX 43534912 43536100 -123114196 - Lx3C LINE L1 -15 6961 5651 6 917 3587 171 14 9 chrX 43536086 43536737 -123113559 + Lx3C LINE L1 5012 5665 -221 6 917 488 251 136 15 chrX 43536735 43536941 -123113355 - L1MB5 LINE L1 -516 5364 5134 5 917 1732 207 57 35 chrX 43536944 43537485 -123112811 - L1MB5 LINE L1 -3931 1949 1397 5 917 2456 280 70 16 chrX 43537913 43538389 -123111907 - L1MB5 LINE L1 -6561 1167 684 5 917 3336 150 62 3 chrX 43538389 43538957 -123111339 + MT2B LTR ERVL 1 601 0 6 917 2456 280 70 16 chrX 43538957 43539388 -123110908 - L1MB5 LINE L1 -7045 683 211 5 917 2229 112 16 0 chrX 43539437 43539759 -123110537 - ORR1A2 LTR MaLR 0 327 1 6 917 421 302 25 33 chrX 43539799 43540073 -123110223 - L1MC2 LINE L1 -414 5930 5659 6 917 213 39 0 0 chrX 43540079 43540105 -123110191 + (TA)n Simple_repeat Simple_repeat 2 27 0 6 917 301 344 8 8 chrX 43540235 43540367 -123109929 - L1MC2 LINE L1 -911 5433 5302 6 917 443 293 87 26 chrX 43540397 43540709 -123109587 - L1MC2 LINE L1 -874 5272 4942 6 917 489 355 5 66 chrX 43540711 43540922 -123109374 - B3A SINE B2 0 198 1 6 917 198 0 0 0 chrX 43541470 43541492 -123108804 + (TTTTTA)n Simple_repeat Simple_repeat 5 26 0 6 917 242 288 153 48 chrX 43542113 43542237 -123108059 + ID_B1 SINE B4 88 224 0 6 917 3792 111 7 7 chrX 43543946 43544517 -123105779 + L1_Mus4 LINE L1 6059 6629 -7 6 917 26 30 0 0 chrX 43544534 43544567 -123105729 + AT_rich Low_complexity Low_complexity 1 33 0 6 917 22 0 0 0 chrX 43544985 43545007 -123105289 + AT_rich Low_complexity Low_complexity 1 22 0 7 917 307 177 0 3 chrX 43545137 43545201 -123105095 + Lx3B LINE L1 6913 6974 -2 7 917 39 50 0 0 chrX 43545202 43545262 -123105034 + AT_rich Low_complexity Low_complexity 1 60 0 7 917 1167 245 89 12 chrX 43545340 43545655 -123104641 - ORR1B2 LTR MaLR -7 319 3 7 917 554 250 70 32 chrX 43545655 43545799 -123104497 + MTD LTR MaLR 77 226 -193 7 917 1406 142 0 13 chrX 43545802 43546037 -123104259 - L1VL1 LINE L1 -6173 249 18 7 917 4761 66 43 21 chrX 43546038 43546704 -123103592 + L1Md_F2 LINE L1 5902 6582 0 7 917 956 256 23 9 chrX 43546733 43546954 -123103342 + MTD LTR MaLR 196 419 0 7 917 6578 123 12 24 chrX 43547053 43548089 -123102207 + RLTR13D5 LTR ERVK 1 1023 0 7 917 1434 258 52 74 chrX 43548155 43548637 -123101659 + L1_Mur1 LINE L1 802 1248 -5736 7 917 292 22 22 22 chrX 43548637 43548683 -123101613 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 7 917 1434 187 0 29 chrX 43548683 43548821 -123101475 + L1_Mur1 LINE L1 1249 1406 -4471 7 917 3842 176 8 29 chrX 43548823 43549623 -123100673 + Lx2 LINE L1 5130 5922 -1087 8 917 685 107 25 0 chrX 43549628 43549749 -123100547 + (GAAA)n Simple_repeat Simple_repeat 2 125 0 8 917 5715 166 32 5 chrX 43549754 43550810 -123099486 + Lx2 LINE L1 5911 6995 -2 8 917 1446 216 33 0 chrX 43550821 43551155 -123099141 + L1_Mur1 LINE L1 1410 1754 -4132 7 917 33002 84 24 7 chrX 43551156 43556491 -123093805 + Lx7 LINE L1 487 5909 -1787 8 917 546 16 0 0 chrX 43556502 43556565 -123093731 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 8 917 7838 55 4 0 chrX 43556572 43557551 -123092745 + L1Md_F3 LINE L1 5602 6584 0 8 917 21 36 0 0 chrX 43557553 43557581 -123092715 + AT_rich Low_complexity Low_complexity 1 28 0 8 917 4250 194 31 10 chrX 43557595 43558649 -123091647 + MusHAL1 LINE L1 542 1617 -1095 8 917 305 191 0 45 chrX 43558628 43558694 -123091602 + L1_Mur2 LINE L1 5159 5221 -656 8 917 2072 169 63 26 chrX 43558694 43559178 -123091118 + MT2B2 LTR ERVL 33 584 0 8 917 617 221 30 127 chrX 43559629 43559826 -123090470 - RMER12 LTR ERVK 0 1322 1145 8 917 366 288 50 111 chrX 43559935 43560074 -123090222 - RMER12 LTR ERVK -196 1126 994 8 917 1245 96 0 0 chrX 43560074 43560252 -123090044 + (GGAGA)n Simple_repeat Simple_repeat 2 179 0 9 917 3320 191 82 21 chrX 43560252 43560997 -123089299 - RMER12 LTR ERVK -329 993 1 8 917 377 334 136 37 chrX 43561408 43561731 -123088565 - L1M4c LINE L1 -4985 1399 1045 9 917 595 301 48 0 chrX 43561794 43561960 -123088336 - B3A SINE B2 -16 182 9 9 917 2425 104 0 24 chrX 43562122 43562496 -123087800 - L1Md_F2 LINE L1 0 6582 6218 9 917 402 79 0 0 chrX 43564834 43564897 -123085399 + (A)n Simple_repeat Simple_repeat 1 63 0 9 917 391 282 18 53 chrX 43565078 43565326 -123084970 + L1VL1 LINE L1 45 398 -6024 9 917 432 286 20 7 chrX 43565377 43565525 -123084771 + L1Md_F LINE L1 674 823 -5793 9 917 5003 138 3 78 chrX 43565514 43566929 -123083367 + L1Md_F LINE L1 725 2014 -3869 9 917 2210 101 0 3 chrX 43566930 43567247 -123083049 + L1_Mus1 LINE L1 6252 6567 0 9 917 332 233 72 46 chrX 43567279 43567432 -123082864 - Lx9 LINE L1 0 7644 7488 9 917 926 129 0 6 chrX 43567518 43567682 -123082614 + (TTTC)n Simple_repeat Simple_repeat 1 163 0 9 917 997 104 0 0 chrX 43567683 43567818 -123082478 - B1_Mus1 SINE Alu -13 135 1 1 917 24 53 0 0 chrX 43568181 43568219 -123082077 + AT_rich Low_complexity Low_complexity 1 38 0 1 917 4526 34 0 0 chrX 43568383 43568912 -123081384 - L1Md_T LINE L1 0 6582 6054 1 917 2205 50 0 11 chrX 43568915 43569197 -123081099 - L1Md_F2 LINE L1 0 6582 6304 1 917 1049 267 70 49 chrX 43569279 43569665 -123080631 - Lx5 LINE L1 -50 7000 6607 1 917 3775 150 10 2 chrX 43569666 43570287 -123080009 - Lx LINE L1 -5 6649 6024 1 917 1558 90 14 0 chrX 43570330 43570553 -123079743 + L1_Mus1 LINE L1 5926 6151 -416 1 917 7009 46 0 0 chrX 43571027 43571916 -123078380 - L1Md_T LINE L1 0 6582 5694 1 917 3303 75 2 0 chrX 43571918 43572346 -123077950 + L1_Mus1 LINE L1 6139 6567 0 1 917 6768 161 25 6 chrX 43572405 43574531 -123075765 + Lx LINE L1 4484 6646 -8 1 917 520 132 157 0 chrX 43574533 43574635 -123075661 - RMER6C LTR ERVK -566 154 1 1 917 711 240 208 83 chrX 43574907 43575379 -123074917 + MT2A LTR ERVL 3 533 0 1 917 522 148 0 0 chrX 43576182 43576283 -123074013 + (TG)n Simple_repeat Simple_repeat 2 102 0 1 917 261 412 11 58 chrX 43576284 43576472 -123073824 - B3A SINE B2 -18 180 2 1 917 22 0 0 0 chrX 43576603 43576625 -123073671 + AT_rich Low_complexity Low_complexity 1 22 0 1 917 36318 41 0 2 chrX 43576666 43582867 -123067429 - L1Md_T LINE L1 0 6585 300 1 917 1034 83 0 0 chrX 43582868 43583000 -123067296 - IAPEY2_LTR LTR ERVK -225 132 1 1 917 3642 170 42 65 chrX 43583000 43584703 -123065593 - L1Md_F LINE L1 -2068 1749 84 1 917 3011 175 158 92 chrX 43584703 43585553 -123064743 + RMER17A2 LTR ERVK 1 906 0 1 917 2315 286 123 45 chrX 43585553 43585978 -123064318 - L1Md_F LINE L1 -5795 724 1 1 917 203 180 39 20 chrX 43586135 43586186 -123064110 + A-rich Low_complexity Low_complexity 3 54 0 1 917 2320 258 89 13 chrX 43586283 43586886 -123063410 - Lx7 LINE L1 -371 7325 6669 1 917 3010 78 0 8 chrX 43586886 43587285 -123063011 - MTA_Mm LTR MaLR 0 396 1 1 917 2320 258 89 13 chrX 43587285 43587431 -123062865 - Lx7 LINE L1 -1028 6668 6519 1 917 345 276 58 13 chrX 43587421 43587575 -123062721 - Lx7 LINE L1 -1500 6196 6036 1 917 1630 241 116 25 chrX 43587576 43588320 -123061976 - Lx7 LINE L1 -1551 6145 5329 1 917 921 218 23 175 chrX 43588314 43588793 -123061503 - Lx7 LINE L1 -1668 4212 3807 1 917 1640 252 46 9 chrX 43588832 43589269 -123061027 - Lx5 LINE L1 -11 7039 6587 1 917 913 224 69 4 chrX 43589268 43589566 -123060730 - Lx7 LINE L1 -2087 3793 3488 1 917 582 207 32 151 chrX 43589570 43589821 -123060475 - Lx5 LINE L1 -5 7045 6825 1 917 434 329 82 14 chrX 43590101 43590394 -123059902 - Lx7 LINE L1 -6901 827 515 1 917 779 317 88 11 chrX 43590766 43591227 -123059069 - Lx7 LINE L1 -394 7302 6800 1 917 1494 250 21 24 chrX 43591227 43591649 -123058647 + MTC LTR MaLR 1 421 0 1 917 779 317 88 11 chrX 43591649 43591711 -123058585 - Lx7 LINE L1 -897 6799 6740 1 917 4000 262 27 47 chrX 43591722 43592937 -123057359 + Lx6 LINE L1 6267 7457 -3 1 917 391 247 46 7 chrX 43592937 43593088 -123057208 + Lx9 LINE L1 7485 7641 -3 1 917 781 332 60 25 chrX 43593110 43593512 -123056784 - Lx7 LINE L1 -1081 6615 6200 1 917 900 28 0 0 chrX 43593526 43593633 -123056663 + (GGAA)n Simple_repeat Simple_repeat 2 108 0 1 917 7367 76 0 7 chrX 43593640 43594616 -123055680 + L1Md_F2 LINE L1 5602 6570 -12 1 917 237 386 196 5 chrX 43594801 43595199 -123055097 - L2 LINE L2 -1816 1603 1130 1 917 364 193 45 0 chrX 43595416 43595504 -123054792 - URR1B DNA MER1_type -3 222 131 1 917 414 221 97 0 chrX 43595504 43595617 -123054679 + L1_Mur2 LINE L1 433 556 -6530 1 917 3125 170 166 5 chrX 43595614 43596467 -123053829 + L1_Mur2 LINE L1 1721 2711 -3166 1 917 3537 137 64 1 chrX 43596464 43597150 -123053146 + L1_Mur2 LINE L1 3565 4293 -1584 1 917 1165 149 17 42 chrX 43597144 43597382 -123052914 + Lx4B LINE L1 5671 5902 -1156 1 917 1091 222 0 17 chrX 43597380 43597614 -123052682 + Lx4B LINE L1 6136 6365 -693 1 917 1174 185 16 4 chrX 43597612 43597856 -123052440 + Lx4B LINE L1 6536 6782 -276 1 917 375 407 24 18 chrX 43598572 43599016 -123051280 - RMER1C Other Other -477 865 377 1 917 242 398 36 11 chrX 43600318 43600647 -123049649 - RMER1C Other Other -468 874 447 1 917 489 390 16 10 chrX 43600704 43601012 -123049284 - RMER1C Other Other -547 795 486 1 917 239 362 29 8 chrX 43601272 43601426 -123048870 - RMER1C Other Other -576 766 486 1 917 420 384 0 58 chrX 43602012 43602324 -123047972 - RMER1C Other Other -563 779 486 1 917 181 232 142 66 chrX 43602345 43602451 -123047845 - MIR SINE MIR -69 193 80 1 917 515 380 45 25 chrX 43603410 43603855 -123046441 - RMER1C Other Other -473 869 416 1 917 307 414 15 29 chrX 43604562 43604910 -123045386 - RMER1C Other Other -662 680 376 1 917 292 391 21 66 chrX 43611837 43612380 -123037916 - RMER1C Other Other -460 882 462 1 917 22 56 0 0 chrX 43612851 43612887 -123037409 + AT_rich Low_complexity Low_complexity 1 36 0 1 917 228 384 28 66 chrX 43613346 43613725 -123036571 - RMER1C Other Other -572 770 486 1 917 378 393 23 64 chrX 43614336 43615013 -123035283 - RMER1C Other Other -460 882 401 1 917 233 417 0 0 chrX 43615759 43615879 -123034417 - RMER1C Other Other -561 781 662 1 917 263 431 65 4 chrX 43617190 43617453 -123032843 - RMER1C Other Other -561 781 503 1 917 272 395 17 75 chrX 43617550 43618034 -123032262 - RMER1C Other Other -485 857 400 1 917 229 418 15 15 chrX 43619105 43619309 -123030987 - RMER1C Other Other -738 604 401 1 917 277 441 14 42 chrX 43619858 43620385 -123029911 - RMER1C Other Other -511 831 412 1 917 567 366 81 38 chrX 43620958 43621376 -123028920 - RMER1C Other Other -482 860 425 1 917 21 36 0 0 chrX 43621516 43621544 -123028752 + AT_rich Low_complexity Low_complexity 1 28 0 1 917 21 0 0 0 chrX 43621861 43621882 -123028414 + AT_rich Low_complexity Low_complexity 1 21 0 1 917 26 74 0 0 chrX 43622145 43622199 -123028097 + AT_rich Low_complexity Low_complexity 1 54 0 1 917 36 53 0 0 chrX 43622240 43622297 -123027999 + AT_rich Low_complexity Low_complexity 1 57 0 1 917 769 341 22 51 chrX 43623477 43623789 -123026507 + MTE2b LTR MaLR 75 377 -2 1 917 1179 258 57 10 chrX 43623851 43624378 -123025918 + Lx9 LINE L1 5570 6246 -1398 1 917 366 159 0 0 chrX 43624500 43624569 -123025727 + T-rich Low_complexity Low_complexity 1 69 0 1 917 1062 97 7 0 chrX 43624570 43624714 -123025582 - B1_Mus2 SINE Alu -1 146 2 1 917 961 276 47 28 chrX 43625171 43625532 -123024764 - ORR1D2 LTR MaLR 0 370 3 1 917 456 380 13 4 chrX 43625625 43625855 -123024441 - Lx8 LINE L1 -283 7190 6959 1 917 38427 7 0 0 chrX 43625889 43631262 -123019034 + L1Md_A LINE L1 213 5586 -297 1 917 9024 2 0 0 chrX 43631262 43632258 -123018038 + L1Md_A LINE L1 5587 6582 0 1 917 472 316 79 45 chrX 43632262 43632464 -123017832 + ORR1D2 LTR MaLR 17 225 -145 1 917 13407 213 49 20 chrX 43632469 43633323 -123016973 + Lx5 LINE L1 2274 3148 -2732 1 917 288 0 0 0 chrX 43633323 43633355 -123016941 + (TAA)n Simple_repeat Simple_repeat 2 33 0 1 917 13407 213 49 20 chrX 43633355 43634023 -123016273 + Lx5 LINE L1 3149 3884 -1996 1 917 189 0 0 0 chrX 43634023 43634044 -123016252 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1 917 13407 213 49 20 chrX 43634044 43634429 -123015867 + Lx5 LINE L1 3885 4273 -1607 1 917 198 0 0 0 chrX 43634429 43634451 -123015845 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1 917 13407 213 49 20 chrX 43634451 43635950 -123014346 + Lx5 LINE L1 4274 5789 -91 1 917 3578 71 23 4 chrX 43635950 43636429 -123013867 + L1Md_F2 LINE L1 6095 6582 0 1 917 13407 284 57 80 chrX 43636429 43637724 -123012572 + Lx5 LINE L1 5790 7049 -1 1 917 279 295 10 21 chrX 43637904 43638001 -123012295 + RMER5 LTR ERV1 431 526 -8 1 917 3326 255 59 55 chrX 43638490 43640009 -123010287 + Lx6 LINE L1 5140 6720 -740 1 917 952 114 6 11 chrX 43640009 43640186 -123010110 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 1 917 3326 293 60 101 chrX 43640186 43640306 -123009990 + Lx6 LINE L1 6721 6840 -620 1 917 243 226 15 46 chrX 43640306 43640371 -123009925 + RLTR25B LTR ERVK 437 499 -529 1 917 536 174 41 0 chrX 43640317 43640415 -123009881 + B1_Mus2 SINE Alu 44 145 -2 1 917 3326 293 60 101 chrX 43640415 43641020 -123009276 + Lx6 LINE L1 6841 7451 -9 1 917 309 82 0 0 chrX 43641023 43641072 -123009224 + (GAAAA)n Simple_repeat Simple_repeat 2 50 0 1 917 22 70 0 0 chrX 43641783 43641826 -123008470 + AT_rich Low_complexity Low_complexity 1 43 0 1 917 1969 253 33 31 chrX 43641969 43642552 -123007744 + Lx9 LINE L1 6893 7476 -168 1 917 486 33 0 0 chrX 43642552 43642612 -123007684 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 917 601 94 0 0 chrX 43642719 43642804 -123007492 - MTA_Mm LTR MaLR -279 117 33 1 917 1573 156 130 19 chrX 43643077 43643385 -123006911 + MTB_Mm LTR MaLR 66 407 0 1 917 29 0 0 0 chrX 43643539 43643568 -123006728 + AT_rich Low_complexity Low_complexity 1 29 0 1 917 1010 237 34 29 chrX 43643853 43644239 -123006057 - ORR1B1 LTR MaLR 0 394 10 1 917 3653 201 105 86 chrX 43644244 43645331 -123004965 - ORR1B1-int LTR MaLR 0 1963 856 1 917 1129 245 30 104 chrX 43645371 43645728 -123004568 - MT2B LTR ERVL -301 300 1 1 917 256 98 0 0 chrX 43645729 43645770 -123004526 - MERVL_2A-int LTR ERVL -2 5759 5719 1 917 3104 197 14 11 chrX 43645770 43646408 -123003888 - ORR1B1-int LTR MaLR -1323 640 1 1 917 1244 246 15 107 chrX 43646408 43646799 -123003497 - ORR1B1 LTR MaLR 0 394 40 1 114 2856 202 134 112 chrX 43646805 43647735 -123002561 - ORR1B1-int LTR MaLR 0 1963 1013 1 918 10612 73 13 0 chrX 43647735 43648817 -123001479 + L1Md_F2 LINE L1 4146 5227 -656 1 918 405 0 0 0 chrX 43648817 43648862 -123001434 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 918 10612 73 13 0 chrX 43648862 43649201 -123001095 + L1Md_F2 LINE L1 5228 5584 -299 1 918 7818 56 10 0 chrX 43649202 43650187 -123000109 + L1Md_F2 LINE L1 5588 6582 0 1 918 2889 297 82 19 chrX 43650499 43651626 -122998670 + Lx8 LINE L1 6192 7389 -84 1 918 308 289 48 0 chrX 43651693 43651776 -122998520 - ORR1D1 LTR MaLR -62 312 226 1 918 642 291 87 56 chrX 43651899 43652266 -122998030 - MTD LTR MaLR -1 378 1 1 918 375 348 49 0 chrX 43653426 43653590 -122996706 - RMER15 LTR ERVL 0 575 404 1 918 274 152 54 0 chrX 43653833 43653925 -122996371 + GA-rich Low_complexity Low_complexity 1 97 0 1 918 258 157 0 16 chrX 43654060 43654129 -122996167 + L1VL2 LINE L1 1227 1291 -5343 1 918 5967 214 34 15 chrX 43654128 43656186 -122994110 + Lx2B LINE L1 4897 7000 0 1 918 6266 214 68 5 chrX 43656178 43656420 -122993876 + Lx4A LINE L1 4332 4637 -1249 1 918 213 65 0 0 chrX 43656420 43656451 -122993845 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 918 6266 165 37 4 chrX 43656451 43657578 -122992718 + Lx4A LINE L1 4629 5800 -86 1 918 2700 206 92 34 chrX 43657583 43658281 -122992015 + Lx2B LINE L1 6262 6999 -1 1 918 2697 204 15 13 chrX 43658291 43658833 -122991463 + Lx4A LINE L1 5783 6325 -733 1 918 9895 114 5 26 chrX 43658836 43659293 -122991003 - MusHAL1 LINE L1 -1102 2251 1805 1 918 1056 96 0 7 chrX 43659293 43659440 -122990856 + B1_Mm SINE Alu 2 147 0 1 918 9895 114 5 25 chrX 43659440 43660665 -122989631 - MusHAL1 LINE L1 -1549 1804 605 1 918 12811 147 7 31 chrX 43660666 43662978 -122987318 + L1_Mus3 LINE L1 2827 5082 -801 1 918 2562 42 0 0 chrX 43662978 43663290 -122987006 - L1Md_T LINE L1 0 6582 6271 1 918 26033 9 0 0 chrX 43663296 43666959 -122983337 - L1Md_A LINE L1 0 6582 2921 1 918 5982 128 47 42 chrX 43666962 43668513 -122981783 + L1_Mus3 LINE L1 5076 6632 -6 1 918 7456 52 2 0 chrX 43668517 43669719 -122980577 + L1Md_F2 LINE L1 5315 6519 -63 1 918 1823 60 32 0 chrX 43669721 43669969 -122980327 - MTA_Mm LTR MaLR -140 256 1 2 918 5699 196 17 40 chrX 43669969 43670843 -122979453 + L1_Mur3 LINE L1 2233 3112 -2768 2 918 2025 193 15 31 chrX 43670843 43671298 -122978998 + Lx2B LINE L1 6553 7000 0 2 918 5699 196 17 40 chrX 43671298 43671859 -122978437 + L1_Mur3 LINE L1 3113 3636 -2244 2 918 4931 254 81 55 chrX 43671866 43673448 -122976848 + Lx6 LINE L1 5825 7447 -13 2 918 437 277 108 20 chrX 43673454 43673701 -122976595 + Lx7 LINE L1 5699 5969 -1675 2 918 22 0 0 0 chrX 43673899 43673921 -122976375 + AT_rich Low_complexity Low_complexity 1 22 0 2 918 1892 267 31 10 chrX 43673953 43674433 -122975863 + Lx6 LINE L1 6945 7434 -26 2 918 299 304 106 20 chrX 43674449 43674600 -122975696 + Lx8 LINE L1 6203 6366 -1107 2 918 689 281 101 46 chrX 43674600 43674941 -122975355 - MTE2a LTR MaLR 0 379 44 2 918 365 336 14 74 chrX 43674911 43674940 -122975356 + ID_B1 SINE B4 61 198 -25 2 918 625 246 17 0 chrX 43674940 43675058 -122975238 + B1_Mur3 SINE Alu 1 120 -29 2 918 263 189 0 54 chrX 43675071 43675127 -122975169 - MTE2a LTR MaLR -324 55 3 2 918 931 337 66 88 chrX 43675173 43676147 -122974149 + Lx8 LINE L1 6467 7418 -55 2 918 337 129 14 14 chrX 43676248 43676319 -122973977 + (TA)n Simple_repeat Simple_repeat 1 71 0 2 918 217 171 28 28 chrX 43676346 43676418 -122973878 + (TATAA)n Simple_repeat Simple_repeat 3 74 0 2 918 1314 111 23 5 chrX 43676533 43676750 -122973546 - L1_Mus3 LINE L1 -5 6633 6413 2 918 1619 112 26 74 chrX 43676741 43677012 -122973284 - Lx2 LINE L1 -382 6615 6358 2 918 11465 110 5 19 chrX 43677049 43679487 -122970809 + L1Md_F2 LINE L1 446 2846 -3037 2 918 753 119 8 0 chrX 43679472 43679590 -122970706 + L1Md_F2 LINE L1 5948 6066 -516 2 918 4390 172 26 53 chrX 43679586 43680546 -122969750 + L1_Mm LINE L1 4608 5541 -342 2 918 1673 266 23 8 chrX 43680581 43680975 -122969321 + Lx6 LINE L1 7050 7449 -11 2 918 3248 143 66 80 chrX 43681011 43681448 -122968848 + RMER17A LTR ERVK 1 411 -340 2 918 851 115 7 0 chrX 43681448 43681596 -122968700 + (TC)n Simple_repeat Simple_repeat 2 150 0 2 918 3248 143 66 80 chrX 43681596 43681920 -122968376 + RMER17A LTR ERVK 412 751 0 2 918 350 270 186 17 chrX 43683563 43683740 -122966556 - B3 SINE B2 -5 211 5 2 918 1237 312 36 3 chrX 43684477 43684837 -122965459 - MTD LTR MaLR -2 417 46 2 918 1117 304 46 11 chrX 43684947 43685316 -122964980 - Lx8 LINE L1 -765 6708 6327 2 918 1371 306 60 43 chrX 43685358 43685597 -122964699 + Lx8 LINE L1 6765 6997 -476 2 918 4508 149 23 0 chrX 43685597 43686335 -122963961 + Lx3B LINE L1 6219 6973 0 2 918 1371 306 60 43 chrX 43686335 43686694 -122963602 + Lx8 LINE L1 6998 7373 -100 2 918 1755 254 80 74 chrX 43686709 43687194 -122963102 + Lx7 LINE L1 6992 7482 -214 2 918 552 68 0 0 chrX 43687194 43687267 -122963029 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 918 1755 254 80 74 chrX 43687267 43687343 -122962953 + Lx7 LINE L1 7483 7566 -130 2 918 234 62 0 0 chrX 43687343 43687375 -122962921 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 2 918 1755 254 80 74 chrX 43687375 43687513 -122962783 + Lx7 LINE L1 7567 7696 0 2 918 849 310 55 47 chrX 43687522 43687887 -122962409 + Lx8 LINE L1 6990 7357 -116 2 918 1355 220 3 0 chrX 43688042 43688342 -122961954 + L1_Mur2 LINE L1 4939 5239 -638 2 918 4783 207 71 16 chrX 43688336 43689450 -122960846 + Lx2B LINE L1 5826 7000 0 2 918 478 95 103 21 chrX 43689447 43689544 -122960752 + Lx5 LINE L1 5237 5341 -536 2 918 862 108 5 151 chrX 43689535 43689741 -122960555 + Lx LINE L1 6479 6654 0 2 918 4691 176 27 6 chrX 43689754 43690938 -122959358 + Lx5 LINE L1 5354 6579 -471 2 918 323 290 52 69 chrX 43691156 43691330 -122958966 + MER58A DNA MER1_type 48 218 -6 2 918 1872 102 36 7 chrX 43691523 43691800 -122958496 - L1Md_F2 LINE L1 -13 6569 6285 2 918 280 234 13 0 chrX 43691964 43692041 -122958255 + A-rich Low_complexity Low_complexity 5 82 0 2 918 1997 341 64 42 chrX 43692481 43693779 -122956517 + RMER15-int LTR ERVL 737 2063 -2936 2 918 1706 316 55 38 chrX 43694207 43695024 -122955272 + Lx8 LINE L1 6253 7083 -390 2 918 883 92 28 0 chrX 43695118 43695260 -122955036 + (TAGA)n Simple_repeat Simple_repeat 1 146 0 2 918 22 35 0 0 chrX 43695384 43695413 -122954883 + AT_rich Low_complexity Low_complexity 1 29 0 2 918 231 281 89 11 chrX 43695641 43695731 -122954565 + Lx8 LINE L1 6096 6192 -1281 2 918 682 261 205 15 chrX 43695922 43696190 -122954106 + Lx8 LINE L1 6196 6514 -959 2 918 475 208 23 84 chrX 43696195 43696326 -122953970 + MT2B LTR ERVL 154 276 -325 2 918 957 65 0 0 chrX 43696214 43696337 -122953959 + B1_Mus1 SINE Alu 10 132 -16 2 918 925 111 20 0 chrX 43696341 43696494 -122953802 + (GAAA)n Simple_repeat Simple_repeat 1 156 0 2 918 667 343 90 20 chrX 43696494 43696893 -122953403 + Lx8 LINE L1 6524 6950 -523 2 918 458 234 0 45 chrX 43696900 43697012 -122953284 + ORR1B2 LTR MaLR 2 108 -259 2 918 207 100 0 0 chrX 43697084 43697114 -122953182 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2 918 363 298 112 57 chrX 43697324 43697620 -122952676 + L1M4b LINE L1 1911 2222 -5112 2 918 30 45 0 0 chrX 43697804 43697848 -122952448 + AT_rich Low_complexity Low_complexity 1 44 0 2 918 25 31 0 0 chrX 43697896 43697928 -122952368 + AT_rich Low_complexity Low_complexity 1 32 0 2 918 219 250 0 0 chrX 43698060 43698120 -122952176 + (TAA)n Simple_repeat Simple_repeat 1 60 0 2 918 267 228 11 21 chrX 43698339 43698433 -122951863 + Lx9 LINE L1 7458 7550 -94 2 918 4844 110 16 9 chrX 43698600 43699334 -122950962 + Lx LINE L1 5909 6647 -7 2 918 243 0 0 0 chrX 43699432 43699459 -122950837 + (A)n Simple_repeat Simple_repeat 1 27 0 2 918 368 280 203 16 chrX 43699631 43700015 -122950281 + L1M4b LINE L1 3197 3652 -3354 2 918 180 125 0 0 chrX 43700680 43700712 -122949584 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 2 918 586 284 89 72 chrX 43700712 43701073 -122949223 + RMER10A LTR ERVL 47 413 -29 2 918 322 253 102 17 chrX 43701101 43701278 -122949018 + L1M4b LINE L1 3734 3925 -3081 2 918 1775 332 78 31 chrX 43701382 43702700 -122947596 + Lx9 LINE L1 6091 7473 0 2 918 1980 159 14 7 chrX 43702837 43703342 -122946954 - ORR1A2 LTR MaLR -8 386 3 2 918 3162 192 33 25 chrX 43703342 43703979 -122946317 + RLTR26 LTR ERVK 1 642 0 2 918 7999 191 32 48 chrX 43704008 43705810 -122944486 - ORR1A2-int LTR MaLR -191 1772 1 2 918 1875 175 16 0 chrX 43705814 43706128 -122944168 - ORR1A2 LTR MaLR -8 319 1 2 918 3538 187 54 3 chrX 43706534 43707216 -122943080 + RMER6D LTR ERVK 3 719 -1 2 918 555 29 0 0 chrX 43708037 43708106 -122942190 + (TAAA)n Simple_repeat Simple_repeat 2 70 0 2 918 229 331 78 42 chrX 43708319 43708461 -122941835 + Lx8 LINE L1 7077 7223 -250 2 918 229 365 14 0 chrX 43708495 43708569 -122941727 + Lx8 LINE L1 7154 7228 -245 2 918 344 240 166 10 chrX 43709149 43709369 -122940927 + L1MB7 LINE L1 3288 3546 -2600 2 918 600 230 23 17 chrX 43709406 43709583 -122940713 + L1MB7 LINE L1 4787 4964 -1182 2 918 267 93 0 0 chrX 43709784 43709827 -122940469 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 918 418 278 69 22 chrX 43710057 43710333 -122939963 + L1MB7 LINE L1 5680 5968 -216 2 918 3702 37 46 2 chrX 43710465 43710923 -122939373 + L1Md_F3 LINE L1 6091 6568 -16 2 918 654 277 14 111 chrX 43710958 43711165 -122939131 + B3 SINE B2 7 195 -21 2 918 639 123 15 15 chrX 43711320 43711452 -122938844 + L1_Mus3 LINE L1 6505 6636 -2 2 918 523 326 164 20 chrX 43711839 43712089 -122938207 + MTD LTR MaLR 82 367 -52 2 918 5787 144 14 11 chrX 43712090 43713067 -122937229 - Lx2A1 LINE L1 0 7008 6029 2 918 2428 31 6 282 chrX 43713067 43713603 -122936693 + RLTR10 LTR ERVK 1 388 -2 2 918 7847 49 1 3 chrX 43713616 43714576 -122935720 + RLTR10-int LTR ERVK 41 998 -989 2 918 318 256 62 39 chrX 43714640 43714770 -122935526 + RLTR10-int LTR ERVK 1462 1594 -5987 2 918 8785 18 1 0 chrX 43714852 43715846 -122934450 + RLTR10-int LTR ERVK 990 1984 -3 2 918 2428 31 6 282 chrX 43715848 43716384 -122933912 + RLTR10 LTR ERVK 1 388 -2 2 918 417 182 0 0 chrX 43716386 43716463 -122933833 - Lx2A1 LINE L1 -974 6034 5958 2 918 1487 178 132 6 chrX 43716568 43716908 -122933388 + RMER6C LTR ERVK 300 682 -8 2 918 3212 43 5 5 chrX 43717164 43717560 -122932736 - MTA_Mm LTR MaLR 0 396 1 2 918 201 144 21 43 chrX 43718632 43718726 -122931570 + (TA)n Simple_repeat Simple_repeat 2 93 0 2 918 264 100 0 0 chrX 43718730 43718770 -122931526 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 918 275 282 16 91 chrX 43718861 43718982 -122931314 + MTE-int LTR MaLR 289 400 -1180 2 918 3133 41 15 8 chrX 43719125 43719516 -122930780 - MTA_Mm LTR MaLR 0 396 3 2 918 1607 209 26 49 chrX 43720281 43720669 -122929627 - ORR1C2 LTR MaLR -1 383 5 2 918 255 286 131 10 chrX 43720838 43720937 -122929359 + PB1D9 SINE Alu 5 115 -5 2 918 367 110 19 48 chrX 43721983 43722088 -122928208 + (TATAA)n Simple_repeat Simple_repeat 5 106 0 2 918 360 0 0 0 chrX 43722347 43722387 -122927909 + (TAGA)n Simple_repeat Simple_repeat 3 42 0 2 918 31304 99 33 6 chrX 43722479 43728475 -122921821 - L1Md_F2 LINE L1 -1 6996 450 2 918 1045 114 181 0 chrX 43728904 43729097 -122921199 + L1_Mur1 LINE L1 4784 5011 -875 2 918 3885 230 79 22 chrX 43729098 43730265 -122920031 + Lx3A LINE L1 5747 6979 -2 2 918 180 0 0 0 chrX 43730357 43730377 -122919919 + (TAA)n Simple_repeat Simple_repeat 3 22 0 2 918 3854 121 10 10 chrX 43730377 43730964 -122919332 + Lx3A LINE L1 6381 6967 -14 2 918 279 0 0 0 chrX 43730964 43730995 -122919301 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 2 918 5894 88 10 0 chrX 43731098 43731916 -122918380 - L1_Mus3 LINE L1 -27 6611 5789 2 918 902 273 78 19 chrX 43731977 43732235 -122918061 + Lx8 LINE L1 6962 7234 -239 2 918 3432 182 27 20 chrX 43732654 43733405 -122916891 - RMER6A LTR ERVK 0 756 1 2 918 348 24 0 0 chrX 43733435 43733476 -122916820 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 918 213 94 0 0 chrX 43733653 43733685 -122916611 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 918 612 260 102 0 chrX 43733685 43733812 -122916484 - B1_Mur4 SINE Alu -8 142 3 2 918 363 333 88 38 chrX 43733812 43733844 -122916452 - ID_B1 SINE B4 -8 216 50 2 918 236 302 157 60 chrX 43734076 43734210 -122916086 - MLT1E1A LTR MaLR -232 448 302 2 918 1930 200 71 91 chrX 43734394 43735097 -122915199 - RMER6C LTR ERVK 0 690 2 2 918 405 317 58 22 chrX 43735264 43735524 -122914772 + L1MC LINE L1 3495 3757 -2389 2 918 508 319 0 0 chrX 43735599 43735715 -122914581 + RSINE1 SINE B4 18 133 -32 2 918 357 24 0 0 chrX 43735733 43735775 -122914521 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 918 249 279 0 19 chrX 43735775 43735881 -122914415 + (TAAA)n Simple_repeat Simple_repeat 1 104 0 2 918 239 279 16 132 chrX 43736184 43736366 -122913930 + L1MC4 LINE L1 6586 6746 -1296 3 918 1412 213 48 48 chrX 43736828 43737222 -122913074 + RMER10A LTR ERVL 47 440 -2 3 918 3039 87 2 25 chrX 43737318 43737512 -122912784 - L1Md_F2 LINE L1 -19 6563 6377 3 918 2674 25 31 0 chrX 43737512 43737829 -122912467 + IAPLTR2b LTR ERVK 1 327 0 3 918 3039 87 2 25 chrX 43737829 43738073 -122912223 - L1Md_F2 LINE L1 -206 6376 6135 3 918 381 58 0 0 chrX 43738085 43738137 -122912159 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 918 802 289 95 49 chrX 43739272 43740153 -122910143 + Lx8 LINE L1 5283 6241 -1455 3 918 807 158 0 52 chrX 43740197 43740351 -122909945 + B1_Mus1 SINE Alu 2 147 -1 3 918 1682 153 66 0 chrX 43740365 43740685 -122909611 + L1_Mur2 LINE L1 4554 4894 -983 3 918 1783 344 29 14 chrX 43740687 43741528 -122908768 + Lx8 LINE L1 6470 7322 -151 3 918 21 57 0 0 chrX 43741672 43741707 -122908589 + AT_rich Low_complexity Low_complexity 1 35 0 3 918 4288 107 6 13 chrX 43741737 43742373 -122907923 - L1_Mus3 LINE L1 -2 6636 6005 3 918 2717 77 45 15 chrX 43742399 43742797 -122907499 + L1_Mus3 LINE L1 5588 5997 -641 3 918 663 202 0 0 chrX 43742803 43742927 -122907369 - URR1B DNA MER1_type 0 225 102 3 918 199 333 65 28 chrX 43744002 43744110 -122906186 - MIRc SINE MIR -4 264 153 3 918 967 273 95 10 chrX 43744347 43744826 -122905470 - MER34 LTR ERV1 0 542 3 3 918 715 200 0 15 chrX 43745517 43745649 -122904647 - B3 SINE B2 -86 130 1 3 918 237 298 119 64 chrX 43746160 43746411 -122903885 + L1MD3 LINE L1 5967 6231 -1651 3 918 491 187 23 0 chrX 43746568 43746739 -122903557 + (TA)n Simple_repeat Simple_repeat 1 175 0 3 918 27 49 0 0 chrX 43746741 43746782 -122903514 + AT_rich Low_complexity Low_complexity 1 41 0 3 918 188 167 21 0 chrX 43746790 43746838 -122903458 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 918 403 357 65 5 chrX 43746874 43747144 -122903152 + L1MD3 LINE L1 6596 6892 -990 3 918 316 410 30 69 chrX 43747368 43747630 -122902666 + L1MDb LINE L1 253 504 -5905 3 918 1016 275 92 6 chrX 43747722 43748048 -122902248 + Lx8 LINE L1 6615 6968 -505 3 918 253 292 82 36 chrX 43748099 43748209 -122902087 + Lx8 LINE L1 7215 7329 -144 3 918 264 30 0 0 chrX 43748245 43748278 -122902018 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 3 918 1072 84 0 0 chrX 43748278 43748413 -122901883 - B1_Mus1 SINE Alu -11 137 3 3 918 1160 129 5 5 chrX 43748693 43748880 -122901416 - B2_Mm1t SINE B2 -5 188 2 3 918 1503 133 9 0 chrX 43748899 43749132 -122901164 - L1_Mus4 LINE L1 -12 6624 6390 3 918 25 0 0 0 chrX 43749391 43749416 -122900880 + AT_rich Low_complexity Low_complexity 1 25 0 3 918 466 348 0 64 chrX 43749499 43749660 -122900636 + RSINE1 SINE B4 3 153 -12 3 918 369 58 0 0 chrX 43749660 43749712 -122900584 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 918 21 36 0 0 chrX 43749737 43749765 -122900531 + AT_rich Low_complexity Low_complexity 1 28 0 3 918 358 279 105 11 chrX 43749768 43749949 -122900347 + L1MDb LINE L1 807 1004 -5405 3 918 402 163 20 10 chrX 43750012 43750111 -122900185 + CT-rich Low_complexity Low_complexity 1 100 0 3 918 624 234 28 0 chrX 43750111 43750256 -122900040 - B1_Mur4 SINE Alu -1 149 1 3 918 302 0 26 0 chrX 43750260 43750298 -122899998 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 918 6500 115 15 12 chrX 43750299 43751347 -122898949 + Lx3A LINE L1 5918 6968 -13 3 918 297 0 0 0 chrX 43751347 43751380 -122898916 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 3 918 226 262 68 60 chrX 43751384 43751546 -122898750 + L1MDb LINE L1 1093 1264 -5145 3 918 1476 218 39 52 chrX 43751546 43751933 -122898363 + ORR1C2 LTR MaLR 1 382 -2 3 918 226 262 68 60 chrX 43751933 43752022 -122898274 + L1MDb LINE L1 1265 1346 -5063 3 918 356 325 16 16 chrX 43752517 43752642 -122897654 - ID_B1 SINE B4 -3 221 97 3 918 595 163 10 0 chrX 43753089 43753187 -122897109 + L1VL1 LINE L1 1 99 -6323 3 918 1215 97 11 0 chrX 43753183 43753358 -122896938 + L1VL1 LINE L1 423 599 -5823 3 918 31561 94 7 3 chrX 43753362 43756765 -122893531 + L1_Mus1 LINE L1 1317 4748 -1135 3 918 3386 33 2 0 chrX 43756765 43757160 -122893136 - MTA_Mm LTR MaLR 0 396 1 3 918 9245 31 2 1 chrX 43757160 43758257 -122892039 - MTA_Mm-int LTR MaLR 0 1098 1 3 918 3361 35 2 0 chrX 43758257 43758652 -122891644 - MTA_Mm LTR MaLR 0 396 1 3 918 31561 100 5 11 chrX 43758652 43760501 -122889795 + L1_Mus1 LINE L1 4749 6566 -1 3 918 418 324 118 40 chrX 43760608 43761166 -122889130 + L1MDb LINE L1 3616 4207 -2199 3 918 321 26 0 0 chrX 43761310 43761348 -122888948 + (TTA)n Simple_repeat Simple_repeat 3 40 0 3 918 3159 175 154 12 chrX 43761348 43761992 -122888304 - RMER6A LTR ERVK -21 735 1 3 918 1133 242 42 10 chrX 43762164 43762719 -122887577 + L1_Mur3 LINE L1 889 1469 -4408 3 918 392 255 0 109 chrX 43762720 43762737 -122887559 + MT2B LTR ERVL 152 155 -446 3 918 988 116 7 0 chrX 43762737 43762883 -122887413 + B1_Mus2 SINE Alu 1 147 0 3 918 1890 231 29 85 chrX 43762903 43763078 -122887218 + L1_Mur3 LINE L1 1400 1597 -4283 3 918 1037 115 0 33 chrX 43763078 43763231 -122887065 + B1_Mus1 SINE Alu 1 148 0 3 918 1890 225 24 84 chrX 43763231 43763751 -122886545 + L1_Mur3 LINE L1 1591 2063 -3823 3 918 336 24 0 0 chrX 43763751 43763792 -122886504 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 918 5433 195 50 26 chrX 43763792 43765099 -122885197 - L1_Mur3 LINE L1 -1003 4877 3539 3 918 1873 206 14 43 chrX 43765067 43765580 -122884716 - L1_Mur3 LINE L1 -3324 2553 2056 3 918 497 345 102 18 chrX 43765648 43765981 -122884315 - Lx8 LINE L1 -294 7179 6819 3 918 2157 133 49 60 chrX 43766725 43767056 -122883240 - RMER6A LTR ERVK 0 756 431 3 918 531 0 0 0 chrX 43767056 43767115 -122883181 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 3 918 1053 96 0 0 chrX 43767116 43767251 -122883045 - B1_Mm SINE Alu -12 135 1 3 918 2157 133 49 60 chrX 43767251 43767365 -122882931 - RMER6A LTR ERVK -326 430 314 3 918 1445 183 66 63 chrX 43767336 43767716 -122882580 - RMER6A LTR ERVK -319 437 57 3 918 445 296 22 0 chrX 43767741 43767876 -122882420 - B1_Mur2 SINE Alu -10 139 2 3 918 1256 291 68 22 chrX 43767889 43768346 -122881950 + Lx8 LINE L1 6191 6668 -805 3 918 401 326 52 26 chrX 43768347 43768539 -122881757 - RMER15-int LTR ERVL -3750 1249 1053 3 918 1284 182 4 22 chrX 43769107 43769337 -122880959 + URR1A DNA MER1_type 1 226 0 3 918 528 365 16 6 chrX 43769791 43769973 -122880323 - RMER15 LTR ERVL -20 555 372 3 918 231 278 85 122 chrX 43770135 43770299 -122879997 - Lx8 LINE L1 -292 7181 7024 3 918 306 0 0 0 chrX 43770341 43770375 -122879921 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 918 216 0 0 0 chrX 43770375 43770398 -122879898 + (GA)n Simple_repeat Simple_repeat 2 25 0 3 918 308 298 107 6 chrX 43770738 43770897 -122879399 + ERVL-B4-int LTR ERVL 337 511 -5203 3 918 351 294 20 40 chrX 43771163 43771312 -122878984 + ERVL-B4-int LTR ERVL 517 662 -5052 3 918 8258 28 0 0 chrX 43771331 43772939 -122877357 - L1Md_T LINE L1 0 6582 4975 3 918 2702 37 0 0 chrX 43772939 43773261 -122877035 + L1Md_T LINE L1 4676 4997 -886 3 918 1641 36 0 0 chrX 43773522 43773715 -122876581 + B2_Mm1t SINE B2 1 193 0 3 918 265 30 0 0 chrX 43773808 43773841 -122876455 - L1Md_T LINE L1 -895 4988 4956 3 918 2481 35 42 0 chrX 43773841 43774153 -122876143 + L1Md_F3 LINE L1 6260 6584 0 3 918 302 272 44 74 chrX 43774190 43774270 -122876026 + L1MD1 LINE L1 5798 5874 -368 3 918 3231 46 5 0 chrX 43774270 43774664 -122875632 + MTA_Mm LTR MaLR 1 396 0 3 918 302 272 44 74 chrX 43774664 43774718 -122875578 + L1MD1 LINE L1 5875 5928 -314 3 918 862 257 150 21 chrX 43775619 43775953 -122874343 + Lx6 LINE L1 7084 7460 0 3 918 438 257 119 53 chrX 43775944 43776305 -122873991 + L1MC4a LINE L1 6871 7255 -627 3 918 3593 158 30 21 chrX 43776967 43777057 -122873239 - L1_Mus3 LINE L1 0 6638 6551 3 918 4531 75 3 8 chrX 43777057 43777665 -122872631 - L1_Mus1 LINE L1 0 6567 5963 3 114 3593 158 30 21 chrX 43777665 43778274 -122872022 - L1_Mus3 LINE L1 -88 6550 5933 3 919 2843 150 15 6 chrX 43778274 43778749 -122871547 - Lx4A LINE L1 0 7058 6580 3 919 1194 193 312 23 chrX 43779109 43779454 -122870842 - RLTR41 LTR ERV1 0 446 1 3 919 1069 162 15 0 chrX 43779454 43779652 -122870644 - Lx4A LINE L1 -1022 6036 5836 3 919 269 208 58 105 chrX 43780016 43780102 -122870194 + RLTR14-int LTR ERV1 496 577 -4740 3 919 2174 194 98 4 chrX 43780570 43781052 -122869244 + RLTR24 LTR ERV1 3 529 0 3 919 495 48 0 0 chrX 43781389 43781451 -122868845 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 919 379 340 27 54 chrX 43781742 43782003 -122868293 + MuRRS4-int LTR ERV1 2242 2495 -2568 3 919 330 333 10 75 chrX 43782417 43782618 -122867678 + RLTR4_MM-int LTR ERV1 4080 4267 -3185 3 919 725 287 44 50 chrX 43783068 43783365 -122866931 + RLTR4_MM-int LTR ERV1 4867 5161 -2440 3 919 537 30 0 0 chrX 43783389 43783456 -122866840 + (CAA)n Simple_repeat Simple_repeat 2 68 0 3 919 2890 171 76 63 chrX 43783537 43784169 -122866127 - RLTR26 LTR ERVK -2 640 1 3 919 225 184 0 58 chrX 43784841 43784893 -122865403 - Tigger7 DNA MER2_type -75 2416 2368 3 919 239 278 17 42 chrX 43785373 43785493 -122864803 + GA-rich Low_complexity Low_complexity 2 118 0 3 919 567 295 92 12 chrX 43785503 43785743 -122864553 + RLTR4_MM-int LTR ERV1 5059 5317 0 3 919 712 269 118 34 chrX 43786282 43786578 -122863718 - MTD LTR MaLR -36 383 63 3 919 484 297 53 19 chrX 43790044 43790218 -122860078 + B3 SINE B2 3 183 -33 3 919 276 30 0 0 chrX 43790218 43790251 -122860045 + (CATA)n Simple_repeat Simple_repeat 2 34 0 3 919 484 297 53 19 chrX 43790251 43790282 -122860014 + B3 SINE B2 184 215 -1 3 919 31370 101 3 8 chrX 43790451 43795650 -122854646 + L1Md_F2 LINE L1 446 5585 -298 3 919 7716 69 2 0 chrX 43795651 43796636 -122853660 + L1Md_F2 LINE L1 5587 6573 -9 3 919 669 219 0 35 chrX 43797068 43797210 -122853086 - B1_Mur2 SINE Alu 0 149 13 3 919 232 362 0 0 chrX 43797440 43797509 -122852787 + MT2A LTR ERVL 324 392 -141 3 919 29 28 0 0 chrX 43797563 43797599 -122852697 + AT_rich Low_complexity Low_complexity 1 36 0 3 919 23 33 0 0 chrX 43797882 43797912 -122852384 + AT_rich Low_complexity Low_complexity 1 30 0 3 919 2054 168 5 29 chrX 43798732 43799112 -122851184 - Lx4B LINE L1 -357 6701 6331 3 919 463 182 0 83 chrX 43799108 43799216 -122851080 + Lx5 LINE L1 6670 6768 -282 3 919 2029 195 31 7 chrX 43799216 43799640 -122850656 - L1_Mur2 LINE L1 -185 5692 5259 3 919 365 354 25 20 chrX 43799771 43799973 -122850323 - Lx8 LINE L1 -189 7284 7082 3 919 1364 152 0 0 chrX 43799977 43800200 -122850096 - Lx2 LINE L1 0 6997 6775 3 919 3614 121 0 32 chrX 43800198 43800763 -122849533 - Lx2 LINE L1 -352 6645 6099 3 919 4953 88 0 13 chrX 43800781 43801472 -122848824 - L1Md_F2 LINE L1 -2 6580 5899 3 919 3696 102 5 66 chrX 43801472 43802094 -122848202 + RLTR6_Mm LTR ERV1 1 584 -70 3 919 20331 78 5 6 chrX 43802113 43804923 -122845373 - Lx2 LINE L1 0 5883 3079 3 919 4644 165 11 31 chrX 43804932 43805865 -122844431 - Lx2 LINE L1 -5380 1344 446 3 919 187 265 41 0 chrX 43806146 43806195 -122844101 + L3 LINE CR1 3852 3902 -587 3 919 239 303 0 29 chrX 43808610 43808678 -122841618 + Lx8 LINE L1 7191 7256 -217 3 919 576 276 58 19 chrX 43810302 43810509 -122839787 + B3 SINE B2 2 216 0 3 919 417 153 0 0 chrX 43810509 43810581 -122839715 + GA-rich Low_complexity Low_complexity 4 75 0 3 919 654 163 18 55 chrX 43810610 43810792 -122839504 + RMER6D LTR ERVK 1 227 -493 3 919 26982 15 0 0 chrX 43810792 43813919 -122836377 + L1Md_A LINE L1 2460 5586 -297 3 919 8457 29 1 0 chrX 43813919 43814913 -122835383 + L1Md_A LINE L1 5587 6581 -1 3 919 538 163 252 13 chrX 43814985 43815140 -122835156 + RMER6D LTR ERVK 207 398 -322 3 919 3862 86 4 0 chrX 43815143 43815685 -122834611 - L1Md_F2 LINE L1 0 6582 6047 4 919 1509 213 35 6 chrX 43815685 43816001 -122834295 + RMER6D LTR ERVK 392 716 -4 3 919 482 348 0 21 chrX 43816399 43816543 -122833753 + RSINE1 SINE B4 1 141 -24 4 919 198 71 0 0 chrX 43816543 43816571 -122833725 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 919 912 350 36 17 chrX 43817793 43818208 -122832088 + Tigger7 DNA MER2_type 6 428 -2063 4 919 691 308 143 21 chrX 43818243 43818621 -122831675 + Lx8 LINE L1 6962 7385 -88 4 919 4461 59 0 2 chrX 43818692 43819256 -122831040 - L1Md_F3 LINE L1 -735 5148 4586 4 919 3545 50 0 2 chrX 43819254 43819696 -122830600 + L1Md_F3 LINE L1 5146 5586 -297 4 919 7841 48 15 0 chrX 43819696 43820679 -122829617 + L1Md_F3 LINE L1 5587 6584 0 4 919 22 0 0 0 chrX 43820756 43820778 -122829518 + AT_rich Low_complexity Low_complexity 1 22 0 4 919 4474 8 0 0 chrX 43821096 43821595 -122828701 + L1Md_A LINE L1 6084 6582 0 4 919 738 32 0 0 chrX 43822150 43822243 -122828053 + (TA)n Simple_repeat Simple_repeat 1 93 0 4 919 225 0 0 0 chrX 43822243 43822267 -122828029 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 919 647 302 95 21 chrX 43822364 43822689 -122827607 - RMER5 LTR ERV1 -3 531 183 4 919 198 0 0 0 chrX 43822794 43822816 -122827480 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 4 919 1756 209 53 29 chrX 43823201 43823619 -122826677 - Lx4B LINE L1 -7 7051 6624 4 919 198 0 0 0 chrX 43823824 43823846 -122826450 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 4 919 195 328 72 36 chrX 43824089 43824228 -122826068 - MIRb SINE MIR -26 242 99 4 919 22 0 0 0 chrX 43824776 43824798 -122825498 + AT_rich Low_complexity Low_complexity 1 22 0 4 919 252 276 45 38 chrX 43825312 43825444 -122824852 - MIRc SINE MIR 0 268 136 4 919 248 205 0 0 chrX 43826213 43826252 -122824044 + 5S rRNA rRNA 4 42 -79 4 919 734 302 49 79 chrX 43826246 43826551 -122823745 - MTEa LTR MaLR -83 296 1 4 919 599 304 0 24 chrX 43829189 43829372 -122820924 + B3 SINE B2 5 180 -18 4 919 576 65 0 0 chrX 43829374 43829451 -122820845 + (GA)n Simple_repeat Simple_repeat 2 78 0 4 919 30 0 0 0 chrX 43829667 43829697 -122820599 + AT_rich Low_complexity Low_complexity 1 30 0 4 919 498 268 118 25 chrX 43830508 43830745 -122819551 + Lx8 LINE L1 6129 6387 -1086 4 919 476 316 32 34 chrX 43830756 43830948 -122819348 + B3 SINE B2 1 182 -16 4 919 212 200 15 0 chrX 43830957 43831022 -122819274 + GA-rich Low_complexity Low_complexity 2 67 0 4 919 2026 324 72 35 chrX 43831053 43832102 -122818194 + Lx8 LINE L1 6385 7471 -2 4 919 29 60 0 0 chrX 43832138 43832188 -122818108 + AT_rich Low_complexity Low_complexity 1 50 0 4 919 1670 242 19 8 chrX 43832610 43832973 -122817323 + MTE2b LTR MaLR 1 367 -12 4 919 1114 292 139 17 chrX 43833000 43833411 -122816885 + MTE2b-int LTR MaLR 29 489 -1091 4 919 1020 336 104 27 chrX 43833390 43833777 -122816519 + MTE2b-int LTR MaLR 725 1143 -437 4 919 603 62 0 0 chrX 43833777 43833857 -122816439 + (TGGA)n Simple_repeat Simple_repeat 4 83 0 4 919 1020 336 104 27 chrX 43833857 43833912 -122816384 + MTE2b-int LTR MaLR 1144 1200 -380 4 919 340 320 89 33 chrX 43833927 43834140 -122816156 + MTE2b-int LTR MaLR 1354 1578 -2 4 919 818 339 49 38 chrX 43834141 43834487 -122815809 + MTE2b LTR MaLR 11 360 -19 4 919 248 50 75 0 chrX 43835640 43835680 -122814616 + (CATAT)n Simple_repeat Simple_repeat 2 44 0 4 919 10352 193 161 13 chrX 43835881 43839725 -122810571 - Lx5 LINE L1 -15 7035 2618 4 919 180 0 0 0 chrX 43839728 43839748 -122810548 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 4 919 28201 106 11 9 chrX 43839786 43841774 -122808522 - L1_Mus2 LINE L1 -1 6565 4592 4 919 6533 110 50 4 chrX 43841774 43842752 -122807544 + RLTR13D5 LTR ERVK 1 1023 0 4 919 28201 128 21 7 chrX 43842752 43843842 -122806454 - L1_Mus2 LINE L1 -1292 4591 3482 4 919 292 0 45 23 chrX 43843842 43843886 -122806410 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 4 919 28201 159 21 31 chrX 43843886 43847160 -122803136 - L1_Mus2 LINE L1 -2402 3481 248 4 919 790 213 0 0 chrX 43847169 43847333 -122802963 - Lx5 LINE L1 -3251 2626 2463 4 919 742 109 125 0 chrX 43849850 43849978 -122800318 - B1_Mus1 SINE Alu -2 146 3 4 919 2973 187 43 4 chrX 43849978 43850426 -122799870 + RLTR20D LTR ERVK 10 463 -105 4 919 915 63 0 0 chrX 43850426 43850553 -122799743 + (TG)n Simple_repeat Simple_repeat 2 128 0 4 919 2973 187 43 4 chrX 43850553 43850642 -122799654 + RLTR20D LTR ERVK 464 566 -2 4 919 219 211 35 0 chrX 43851283 43851340 -122798956 + (CAGA)n Simple_repeat Simple_repeat 4 62 0 4 919 23 33 0 0 chrX 43851909 43851939 -122798357 + AT_rich Low_complexity Low_complexity 1 30 0 4 919 997 109 0 0 chrX 43851984 43852122 -122798174 + B1_Mus1 SINE Alu 2 139 -9 4 919 273 57 0 0 chrX 43852122 43852157 -122798139 + (CAA)n Simple_repeat Simple_repeat 2 36 0 4 919 309 337 0 65 chrX 43853102 43853210 -122797086 - ID_B1 SINE B4 -7 217 117 4 919 387 312 60 60 chrX 43853272 43853490 -122796806 + MLT1A1 LTR MaLR 6 223 -185 4 919 252 0 0 0 chrX 43854006 43854034 -122796262 + (A)n Simple_repeat Simple_repeat 1 28 0 4 919 207 0 0 0 chrX 43854032 43854055 -122796241 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 919 233 260 0 24 chrX 43854805 43854824 -122795472 + ORR1B1-int LTR MaLR 632 647 -862 4 919 992 65 58 0 chrX 43854824 43854963 -122795333 + B1_Mus2 SINE Alu 1 147 0 4 919 258 56 0 0 chrX 43854963 43854999 -122795297 + (A)n Simple_repeat Simple_repeat 1 36 0 4 919 243 250 50 0 chrX 43855121 43855181 -122795115 + MLT1M LTR MaLR 101 163 -509 4 919 321 259 31 52 chrX 43855422 43855614 -122794682 + L1M2 LINE L1 4556 4740 -1107 4 919 4765 163 10 83 chrX 43855606 43856436 -122793860 + L1_Mus2 LINE L1 403 1197 -5441 4 919 1216 48 0 0 chrX 43856436 43856582 -122793714 + B1_Mus2 SINE Alu 2 147 0 4 919 24412 157 14 48 chrX 43856582 43860589 -122789707 + L1_Mus2 LINE L1 1198 5123 -758 4 919 888 44 0 0 chrX 43860589 43860703 -122789593 + B1_Mus1 SINE Alu 29 142 -6 4 919 360 0 0 0 chrX 43860705 43860745 -122789551 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 4 919 24412 157 14 48 chrX 43860745 43860931 -122789365 + L1_Mus2 LINE L1 5126 5292 -591 4 919 5359 57 3 9 chrX 43860931 43861620 -122788676 + L1Md_F2 LINE L1 5898 6582 0 4 919 24412 157 14 48 chrX 43861620 43861633 -122788663 + L1_Mus2 LINE L1 5293 5299 -584 4 919 1512 182 111 29 chrX 43861633 43862011 -122788285 - RLTR9E LTR ERVK 0 409 1 4 919 24412 104 13 13 chrX 43862011 43863255 -122787041 + L1_Mus2 LINE L1 5300 6565 -1 4 919 4671 103 142 1 chrX 43863263 43864011 -122786285 + L1_Mus3 LINE L1 5782 6634 -4 4 919 343 245 8 0 chrX 43864051 43864144 -122786152 + L1_Mur1 LINE L1 679 851 -6133 4 919 7185 149 43 9 chrX 43864245 43866063 -122784233 + L1_Mur1 LINE L1 747 2619 -3267 4 919 548 14 14 0 chrX 43866063 43866132 -122784164 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 919 782 155 6 6 chrX 43866133 43866289 -122784007 + L1_Mur1 LINE L1 3047 3202 -2684 4 919 12205 152 26 30 chrX 43866281 43868679 -122781617 + L1_Mur1 LINE L1 2625 5011 -875 4 919 4117 141 42 4 chrX 43868680 43869371 -122780925 + Lx3C LINE L1 6258 6974 -2 4 919 216 0 0 0 chrX 43869384 43869408 -122780888 + (TAA)n Simple_repeat Simple_repeat 1 24 0 4 919 205 269 13 0 chrX 43869451 43869529 -122780767 + A-rich Low_complexity Low_complexity 4 82 0 4 919 360 343 58 14 chrX 43869549 43870109 -122780187 + L1M2 LINE L1 4893 5469 -687 4 919 279 269 63 27 chrX 43870164 43870275 -122780021 + L1M2 LINE L1 5679 5793 -498 4 919 399 182 0 0 chrX 43870285 43870362 -122779934 + (TATG)n Simple_repeat Simple_repeat 4 80 0 4 919 398 200 0 59 chrX 43870365 43870450 -122779846 - URR1B DNA MER1_type -3 222 143 4 919 3893 134 5 3 chrX 43870468 43871061 -122779235 + Lx LINE L1 6053 6646 -8 4 919 267 152 0 0 chrX 43871062 43871108 -122779188 + (TAA)n Simple_repeat Simple_repeat 3 48 0 4 919 2042 201 3 10 chrX 43871243 43871630 -122778666 + ORR1B1 LTR MaLR 2 385 -9 4 919 2987 219 82 9 chrX 43871747 43872378 -122777918 - Lx9 LINE L1 0 7644 6958 4 919 2812 55 3 0 chrX 43872378 43872723 -122777573 - ORR1A1 LTR MaLR 0 346 1 4 919 2987 219 82 9 chrX 43872723 43872839 -122777457 - Lx9 LINE L1 -687 6957 6843 4 919 727 276 106 114 chrX 43872943 43873387 -122776909 + RMER13A LTR ERVK 98 586 -41 4 919 240 263 0 0 chrX 43873588 43873645 -122776651 - Lx9 LINE L1 -802 6842 6786 4 919 889 189 226 21 chrX 43873680 43873967 -122776329 - RLTR15 LTR ERVK -13 346 1 4 919 1496 248 43 3 chrX 43873967 43874315 -122775981 - Lx9 LINE L1 -854 6790 6429 4 919 10674 185 68 22 chrX 43874322 43876938 -122773358 + Lx2 LINE L1 2810 6193 -804 4 919 38184 22 6 21 chrX 43876943 43882138 -122768158 + Lx5 LINE L1 442 5586 -297 4 919 8771 17 0 0 chrX 43882138 43883134 -122767162 + L1Md_A LINE L1 5587 6582 0 4 919 38184 140 38 10 chrX 43883134 43883935 -122766361 + Lx5 LINE L1 5587 6368 -682 4 919 1895 52 4 0 chrX 43883937 43884187 -122766109 + RLTR10 LTR ERVK 1 251 -139 4 919 1404 24 0 0 chrX 43884187 43884354 -122765942 - L1Md_T LINE L1 -512 6070 5904 4 919 4344 31 0 0 chrX 43884359 43884868 -122765428 + L1Md_T LINE L1 6074 6582 0 4 919 855 64 10 182 chrX 43884868 43885054 -122765242 + RLTR10 LTR ERVK 235 388 -2 4 919 2188 228 5 9 chrX 43885063 43885489 -122764807 + Lx5 LINE L1 6372 6795 -255 4 919 469 314 116 49 chrX 43885657 43886002 -122764294 - MamRep434 DNA TcMar -58 368 1 4 919 273 347 183 9 chrX 43886907 43887131 -122763165 - Lx8 LINE L1 -123 7350 7088 4 919 915 238 11 84 chrX 43887132 43887417 -122762879 - RLTR9A LTR ERVK 0 368 105 4 919 21 0 0 0 chrX 43887499 43887520 -122762776 + AT_rich Low_complexity Low_complexity 1 21 0 4 919 261 0 0 0 chrX 43887959 43887988 -122762308 + (CCCCCA)n Simple_repeat Simple_repeat 1 29 0 4 919 3407 172 27 89 chrX 43888036 43888566 -122761730 - ETnERV2-int LTR ERVK -1195 6211 5692 4 919 1089 76 7 0 chrX 43888566 43888711 -122761585 + B1_Mus2 SINE Alu 2 147 0 4 919 3407 172 27 89 chrX 43888711 43888965 -122761331 - ETnERV2-int LTR ERVK -1715 5691 5476 4 919 2315 150 10 10 chrX 43889804 43890214 -122760082 - ETnERV2-int LTR ERVK -1917 5489 5162 4 919 908 236 124 71 chrX 43890292 43890630 -122759666 - RLTR9A LTR ERVK -8 360 5 4 919 526 351 30 30 chrX 43890630 43890897 -122759399 - Lx7 LINE L1 -611 7085 6819 4 919 3754 130 9 5 chrX 43890913 43891494 -122758802 + Lx LINE L1 6071 6653 -1 4 919 22 0 0 0 chrX 43891555 43891577 -122758719 + AT_rich Low_complexity Low_complexity 1 22 0 4 919 1139 259 163 65 chrX 43891733 43892291 -122758005 - LTR82A LTR ERVL -149 723 111 4 919 294 321 118 7 chrX 43892867 43893002 -122757294 + MLT1A1 LTR MaLR 259 408 0 4 919 234 130 36 18 chrX 43894650 43894705 -122755591 + Lx9 LINE L1 7587 7642 -2 4 919 37967 15 0 7 chrX 43895606 43901019 -122749277 + L1Md_A LINE L1 215 5586 -297 4 919 8831 12 0 0 chrX 43901019 43902013 -122748283 + L1Md_A LINE L1 5587 6580 -2 4 919 434 219 97 45 chrX 43902185 43902258 -122748038 + B1F2 SINE Alu 9 86 -63 4 919 492 18 0 0 chrX 43902258 43902315 -122747981 + (GA)n Simple_repeat Simple_repeat 1 57 0 4 919 434 219 97 45 chrX 43902315 43902375 -122747921 + B1F2 SINE Alu 87 149 0 4 919 1118 95 0 0 chrX 43903105 43903252 -122747044 + B1_Mus1 SINE Alu 2 148 0 4 919 903 291 83 23 chrX 43903580 43904110 -122746186 - L1MA4 LINE L1 -443 5857 5296 4 919 2963 293 50 33 chrX 43904231 43905368 -122744928 - Lx9 LINE L1 -130 7514 6359 4 919 248 289 19 76 chrX 43905369 43905474 -122744822 - RMER12 LTR ERVK -479 843 745 4 919 25 0 0 0 chrX 43905477 43905502 -122744794 + AT_rich Low_complexity Low_complexity 1 25 0 4 919 2017 263 77 34 chrX 43905534 43905999 -122744297 - Lx9 LINE L1 -1641 6055 5537 4 919 239 0 32 0 chrX 43905999 43906030 -122744266 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 919 2017 244 90 41 chrX 43906030 43906552 -122743744 - Lx9 LINE L1 -311 5536 5047 4 919 444 347 64 83 chrX 43906640 43906967 -122743329 - ORR1E LTR MaLR -38 321 1 5 919 4399 95 102 10 chrX 43907043 43907737 -122742559 - Lx3_Mus LINE L1 -5 7004 6247 5 919 234 0 0 0 chrX 43907967 43907993 -122742303 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 920 405 322 260 26 chrX 43909267 43909624 -122740672 + MLT1J LTR MaLR 68 507 -5 5 920 261 0 0 0 chrX 43911927 43911956 -122738340 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 920 423 0 0 0 chrX 43911956 43912002 -122738294 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 920 33 0 0 0 chrX 43915345 43915378 -122734918 + AT_rich Low_complexity Low_complexity 1 33 0 5 920 594 332 19 65 chrX 43915466 43915682 -122734614 - B3 SINE B2 -8 208 3 5 920 21 71 0 0 chrX 43916699 43916741 -122733555 + AT_rich Low_complexity Low_complexity 1 42 0 5 920 554 41 14 0 chrX 43916786 43916859 -122733437 + (TG)n Simple_repeat Simple_repeat 1 74 0 5 920 345 298 80 74 chrX 43916902 43917065 -122733231 - B4A SINE B4 -125 167 4 5 920 21 0 0 0 chrX 43917185 43917206 -122733090 + AT_rich Low_complexity Low_complexity 1 21 0 5 920 305 269 87 0 chrX 43919535 43919639 -122730657 + L1M2 LINE L1 4677 4789 -1354 5 920 348 310 165 21 chrX 43919662 43919806 -122730490 + L1M2 LINE L1 4861 5013 -1130 5 920 2888 74 0 0 chrX 43919806 43920184 -122730112 + L1Md_F2 LINE L1 6189 6566 -16 5 920 493 287 71 15 chrX 43920184 43920592 -122729704 + L1M2 LINE L1 5014 5486 -670 5 920 403 348 19 31 chrX 43920596 43920738 -122729558 + RSINE1 SINE B4 4 144 -21 5 920 378 0 0 0 chrX 43920738 43920780 -122729516 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 920 403 348 19 31 chrX 43920780 43920797 -122729499 + RSINE1 SINE B4 145 161 -4 5 920 5154 118 14 14 chrX 43920880 43920903 -122729393 - Lx3_Mus LINE L1 -1 7008 6986 5 920 207 0 0 0 chrX 43920903 43920926 -122729370 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 920 5154 118 14 14 chrX 43920926 43921706 -122728590 - Lx3_Mus LINE L1 -24 6985 6205 5 920 477 283 78 5 chrX 43921725 43921931 -122728365 + L1M2 LINE L1 5506 5726 -586 5 920 284 242 121 0 chrX 43922029 43922095 -122728201 + Lx8 LINE L1 6700 6773 -700 5 920 62 52 0 0 chrX 43922105 43922202 -122728094 + AT_rich Low_complexity Low_complexity 1 97 0 5 920 860 341 53 18 chrX 43922454 43922573 -122727723 - B4A SINE B4 0 292 177 5 920 2310 196 0 2 chrX 43922573 43923027 -122727269 - Lx LINE L1 0 6654 6202 5 920 860 341 53 18 chrX 43923027 43923188 -122727108 - B4A SINE B4 -116 176 2 5 920 185 0 40 0 chrX 43923828 43923853 -122726443 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 920 1032 100 0 0 chrX 43923853 43923993 -122726303 - B1_Mus1 SINE Alu -8 140 1 5 920 501 342 78 30 chrX 43924947 43925215 -122725081 + B4A SINE B4 2 282 -10 5 920 1270 220 155 72 chrX 43925249 43925636 -122724660 + MTD LTR MaLR 1 419 0 5 920 420 37 0 0 chrX 43926275 43926329 -122723967 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 920 378 0 0 0 chrX 43926329 43926370 -122723926 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 920 2389 90 0 3 chrX 43926885 43927218 -122723078 - L1_Mus2 LINE L1 0 6566 6235 5 920 3300 104 0 0 chrX 43927218 43927687 -122722609 + L1_Mm LINE L1 3679 4147 -1736 5 920 336 85 0 0 chrX 43927681 43927728 -122722568 + L1_Mm LINE L1 4557 4603 -1280 5 920 4893 124 1 0 chrX 43927724 43928492 -122721804 + L1_Mm LINE L1 2872 3640 -2243 5 920 971 100 28 7 chrX 43928589 43928730 -122721566 + B1_Mus1 SINE Alu 1 144 -4 5 920 372 43 0 0 chrX 43928737 43928783 -122721513 + (GGAGAA)n Simple_repeat Simple_repeat 3 48 0 5 920 225 0 0 0 chrX 43928783 43928808 -122721488 + (CAA)n Simple_repeat Simple_repeat 1 25 0 5 920 871 89 0 13 chrX 43928808 43928967 -122721329 + (GAA)n Simple_repeat Simple_repeat 2 158 0 5 920 1497 28 0 0 chrX 43928981 43929159 -122721137 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 5 920 3207 171 35 6 chrX 43929295 43929932 -122720364 + L1_Mur2 LINE L1 4143 4797 -1080 5 920 1125 75 7 0 chrX 43930616 43930763 -122719533 + B1_Mus1 SINE Alu 1 148 0 5 920 351 0 0 0 chrX 43930829 43930868 -122719428 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 920 465 71 0 0 chrX 43930869 43930939 -122719357 + (CAGAGA)n Simple_repeat Simple_repeat 2 71 0 5 920 21 0 0 0 chrX 43931352 43931373 -122718923 + AT_rich Low_complexity Low_complexity 1 21 0 5 920 220 204 20 0 chrX 43932171 43932220 -122718076 + CT-rich Low_complexity Low_complexity 1 50 0 5 920 2017 88 14 24 chrX 43932237 43932528 -122717768 + L1_Mus1 LINE L1 6274 6561 -6 5 920 294 214 0 103 chrX 43932578 43932656 -122717640 + Lx7 LINE L1 7231 7300 -396 5 920 200 246 18 0 chrX 43932714 43932771 -122717525 + T-rich Low_complexity Low_complexity 2 59 0 5 920 372 22 0 0 chrX 43932882 43932927 -122717369 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 920 269 275 10 0 chrX 43933032 43933132 -122717164 + L1VL4 LINE L1 521 573 -5762 5 920 3657 166 15 6 chrX 43933232 43934369 -122715927 + L1VL4 LINE L1 445 1584 -2031 5 920 6364 161 39 5 chrX 43934368 43935483 -122714813 + Lx2B LINE L1 4997 6158 -842 5 920 201 74 0 0 chrX 43935483 43935510 -122714786 + (TGG)n Simple_repeat Simple_repeat 1 27 0 5 920 6364 141 31 8 chrX 43935510 43936019 -122714277 + Lx2B LINE L1 6159 6690 -310 5 920 247 340 110 14 chrX 43936303 43936449 -122713847 - MER5A1 DNA MER1_type -3 163 4 5 920 210 233 0 0 chrX 43936883 43936943 -122713353 + (TATG)n Simple_repeat Simple_repeat 4 63 0 5 920 1184 55 0 0 chrX 43938736 43938881 -122711415 - B1_Mus1 SINE Alu -1 147 3 5 920 1005 52 7 0 chrX 43941226 43941362 -122708934 + L1Md_F2 LINE L1 6434 6570 -12 5 920 306 284 39 39 chrX 43941577 43941654 -122708642 - RMER15 LTR ERVL -154 421 345 5 920 444 37 0 0 chrX 43942417 43942471 -122707825 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 920 207 0 0 0 chrX 43942489 43942512 -122707784 + (TC)n Simple_repeat Simple_repeat 2 24 0 5 920 324 70 0 0 chrX 43942512 43942554 -122707742 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 920 260 277 43 35 chrX 43942606 43942722 -122707574 + L1M5 LINE L1 5546 5662 -462 5 920 301 336 103 0 chrX 43942733 43942840 -122707456 + RSINE1 SINE B4 5 122 -43 5 920 21 0 0 0 chrX 43942840 43942861 -122707435 + AT_rich Low_complexity Low_complexity 1 21 0 5 920 267 328 34 0 chrX 43943240 43943359 -122706937 + MIRc SINE MIR 129 251 -17 5 920 261 359 105 23 chrX 43944147 43944318 -122705978 - MER5A DNA MER1_type -1 188 4 5 920 273 29 0 0 chrX 43944378 43944412 -122705884 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 920 556 213 87 0 chrX 43944413 43944540 -122705756 - B1_Mur3 SINE Alu -11 138 1 5 920 180 302 0 0 chrX 43944606 43944649 -122705647 + MIRb SINE MIR 33 75 -193 5 920 414 358 12 53 chrX 43945111 43945282 -122705014 + ORR1D2 LTR MaLR 4 167 -203 5 920 16274 164 33 158 chrX 43947337 43954610 -122695686 + Lx LINE L1 365 6653 -1 5 920 201 213 21 0 chrX 43954615 43954662 -122695634 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 920 24 0 0 0 chrX 43954749 43954773 -122695523 + AT_rich Low_complexity Low_complexity 1 24 0 5 920 818 315 24 85 chrX 43954792 43955202 -122695094 + MTD LTR MaLR 5 389 -30 5 920 383 323 198 0 chrX 43955283 43955475 -122694821 + MIR SINE MIR 33 262 0 5 920 240 35 0 0 chrX 43955586 43955615 -122694681 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 5 920 210 179 0 25 chrX 43955618 43955658 -122694638 + GA-rich Low_complexity Low_complexity 2 40 0 5 920 383 73 0 18 chrX 43958009 43958065 -122692231 + MTA_Mm LTR MaLR 1 55 -341 5 920 4607 86 17 108 chrX 43958041 43958866 -122691430 + MTA_Mm-int LTR MaLR 349 1098 0 5 920 3156 51 5 5 chrX 43958868 43959262 -122691034 + MTA_Mm LTR MaLR 3 396 0 5 920 21 0 0 0 chrX 43959297 43959318 -122690978 + AT_rich Low_complexity Low_complexity 1 21 0 5 920 1116 271 143 16 chrX 43959449 43960271 -122690025 - Lx6 LINE L1 -508 6952 5758 5 920 1145 186 161 124 chrX 43960274 43960709 -122689587 + RMER6B LTR ERVK 1 451 -10 5 920 2639 195 28 11 chrX 43960710 43961274 -122689022 - Lx6 LINE L1 -122 5758 5185 5 920 745 191 7 0 chrX 43961277 43961429 -122688867 - Lx6 LINE L1 -1148 4729 4577 5 920 303 299 62 7 chrX 43961858 43962003 -122688293 + MER103 DNA DNA 14 166 0 5 920 194 318 30 0 chrX 43962251 43962317 -122687979 + MIRc SINE MIR 3 70 -198 5 920 25 51 0 0 chrX 43963558 43963597 -122686699 + AT_rich Low_complexity Low_complexity 1 39 0 5 920 282 56 0 0 chrX 43963966 43964002 -122686294 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 920 576 42 0 0 chrX 43964002 43964073 -122686223 + (TA)n Simple_repeat Simple_repeat 2 72 0 5 920 2568 101 16 0 chrX 43964220 43964598 -122685698 + Lx3A LINE L1 5892 6275 -734 5 920 4958 48 5 6 chrX 43964607 43965238 -122685058 + L1Md_F2 LINE L1 5953 6582 0 5 920 4645 123 3 4 chrX 43965244 43965962 -122684334 + Lx3A LINE L1 6260 6976 -5 5 920 381 304 143 23 chrX 43966950 43967125 -122683171 - MIRb SINE MIR -22 246 51 5 920 22 0 0 0 chrX 43967519 43967541 -122682755 + AT_rich Low_complexity Low_complexity 1 22 0 5 920 477 0 0 0 chrX 43967676 43967729 -122682567 + (TA)n Simple_repeat Simple_repeat 1 53 0 5 920 279 0 0 0 chrX 43967729 43967759 -122682537 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 920 256 228 0 17 chrX 43968231 43968289 -122682007 + ORR1D2 LTR MaLR 157 213 -157 5 920 180 296 0 0 chrX 43969299 43969353 -122680943 - MIR SINE MIR -155 107 54 5 920 604 306 18 41 chrX 43969971 43970189 -122680107 - Tigger7 DNA MER2_type -8 2483 2271 5 920 649 258 74 25 chrX 43970204 43970407 -122679889 + B3 SINE B2 3 215 -1 5 920 21 36 0 0 chrX 43970447 43970475 -122679821 + AT_rich Low_complexity Low_complexity 1 28 0 5 920 352 333 0 0 chrX 43970477 43970579 -122679717 - Tigger7 DNA MER2_type -2374 117 16 5 920 16621 141 20 26 chrX 43970579 43973768 -122676528 - L1VL4 LINE L1 -1685 4198 1025 5 920 1185 167 94 22 chrX 43973778 43974054 -122676242 - L1_Mur2 LINE L1 -433 5444 5149 5 920 401 247 10 20 chrX 43974062 43974161 -122676135 - RLTR41 LTR ERV1 0 446 349 5 920 2346 201 14 44 chrX 43974131 43974630 -122675666 - RLTR12A LTR ERVK -20 548 65 5 920 274 326 21 32 chrX 43974731 43974921 -122675375 - L1M2 LINE L1 -483 5808 5621 6 920 315 157 0 0 chrX 43975078 43975148 -122675148 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 920 23 0 0 0 chrX 43975287 43975310 -122674986 + AT_rich Low_complexity Low_complexity 1 23 0 6 920 41 36 0 0 chrX 43975341 43975396 -122674900 + AT_rich Low_complexity Low_complexity 1 55 0 6 920 311 65 22 0 chrX 43975419 43975465 -122674831 + (TA)n Simple_repeat Simple_repeat 1 47 0 6 920 580 382 56 43 chrX 43976225 43976761 -122673535 + Lx8 LINE L1 6829 7371 -102 6 920 2502 161 13 13 chrX 43976972 43977431 -122672865 - Lx LINE L1 -5 6649 6191 6 920 518 227 178 0 chrX 43977514 43977699 -122672597 - Tigger7 DNA MER2_type -51 2440 2223 6 920 303 407 12 6 chrX 43977710 43977873 -122672423 - Tigger7 DNA MER2_type -2106 385 222 6 920 23 0 0 0 chrX 43978271 43978294 -122672002 + AT_rich Low_complexity Low_complexity 1 23 0 6 920 31 26 0 0 chrX 43978325 43978363 -122671933 + AT_rich Low_complexity Low_complexity 1 38 0 6 920 3033 67 38 23 chrX 43978692 43979119 -122671177 + L1Md_F2 LINE L1 6136 6568 -14 6 920 289 290 110 42 chrX 43979544 43979735 -122670561 + MER110A LTR ERV1 24 227 -241 6 920 14582 62 1 14 chrX 43979738 43982438 -122667858 + L1Md_F2 LINE L1 440 3097 -2786 6 920 10916 30 0 0 chrX 43982436 43983734 -122666562 + L1Md_F2 LINE L1 4289 5586 -297 6 920 7634 57 8 4 chrX 43983734 43984714 -122665582 + L1Md_F2 LINE L1 5587 6570 -12 6 920 320 164 73 8 chrX 43984855 43984978 -122665318 + (TA)n Simple_repeat Simple_repeat 2 132 0 6 920 748 272 57 0 chrX 43985317 43985545 -122664751 + ORR1D1 LTR MaLR 1 241 -133 6 920 598 59 0 0 chrX 43985564 43985649 -122664647 + L1_Mus3 LINE L1 6547 6631 -7 6 920 881 97 0 7 chrX 43985687 43985822 -122664474 + (GGAA)n Simple_repeat Simple_repeat 3 136 0 6 920 222 216 108 0 chrX 43985991 43986065 -122664231 - B4 SINE B4 -209 83 2 6 920 477 0 0 0 chrX 43986671 43986724 -122663572 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 920 614 283 85 73 chrX 43987260 43987519 -122662777 - MTD LTR MaLR -21 398 137 6 920 4285 220 2 35 chrX 43987519 43988428 -122661868 - Lx5 LINE L1 -99 6951 6073 6 920 2452 160 50 7 chrX 43988418 43988859 -122661437 + Lx5 LINE L1 5602 6061 -989 6 920 563 297 124 25 chrX 43988859 43989137 -122661159 - MTD LTR MaLR -104 315 1 6 920 382 343 72 85 chrX 43990514 43990877 -122659419 - ORR1E LTR MaLR -1 358 1 6 920 236 153 16 48 chrX 43991670 43991732 -122658564 + A-rich Low_complexity Low_complexity 5 64 0 6 920 21 0 0 0 chrX 43992668 43992689 -122657607 + AT_rich Low_complexity Low_complexity 1 21 0 6 920 384 22 0 0 chrX 43992785 43992830 -122657466 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 920 888 143 0 0 chrX 43993949 43994103 -122656193 + (TTCC)n Simple_repeat Simple_repeat 3 156 0 6 920 391 283 9 9 chrX 43994304 43994418 -122655878 - MTEb LTR MaLR -28 351 238 6 920 2144 168 51 23 chrX 43994457 43994889 -122655407 - Lx2B LINE L1 -4 6996 6553 6 920 1748 136 3 34 chrX 43994897 43995193 -122655103 + Lx2B LINE L1 6287 6573 -427 6 920 5734 129 35 32 chrX 43995297 43996253 -122654043 + RMER17B LTR ERVK 1 958 0 6 920 4017 70 6 16 chrX 43996349 43996898 -122653398 - L1Md_F2 LINE L1 0 6582 6040 6 920 373 286 16 25 chrX 43996926 43997048 -122653248 + MTEa LTR MaLR 256 376 -3 6 920 1393 246 100 23 chrX 43997084 43997475 -122652821 - MTC LTR MaLR 0 421 1 6 920 270 106 0 0 chrX 43997538 43997585 -122652711 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 920 2010 197 28 31 chrX 43997755 43998147 -122652149 + Lx5 LINE L1 6453 6843 -207 6 920 2165 78 17 83 chrX 43998746 43999096 -122651200 - IAPLTR2b LTR ERVK 0 327 1 6 920 205 392 31 0 chrX 44001364 44001461 -122648835 - MIR SINE MIR -74 134 35 1 920 5391 132 35 2 chrX 44001891 44002751 -122647545 + Lx2B LINE L1 6112 6999 -1 2 920 538 255 260 74 chrX 44003991 44004329 -122645967 - Lx8 LINE L1 -485 7159 6673 3 920 247 333 0 0 chrX 44004330 44004414 -122645882 - Lx8 LINE L1 -984 6489 6406 4 920 607 328 103 43 chrX 44005261 44005691 -122644605 - MLT1C LTR MaLR -6 461 1 5 920 288 0 0 0 chrX 44006103 44006135 -122644161 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 920 399 338 0 14 chrX 44006218 44006365 -122643931 + MIR SINE MIR 68 212 -50 7 920 321 309 57 8 chrX 44006448 44006572 -122643724 - Lx8 LINE L1 -441 7032 6903 8 920 21 36 0 0 chrX 44007069 44007097 -122643199 + AT_rich Low_complexity Low_complexity 1 28 0 9 920 316 268 15 109 chrX 44007807 44008008 -122642288 + L1M6 LINE L1 1547 1728 -4768 1 920 525 129 0 0 chrX 44008281 44008374 -122641922 + (TG)n Simple_repeat Simple_repeat 2 94 0 1 920 285 158 0 56 chrX 44008382 44008478 -122641818 + (TA)n Simple_repeat Simple_repeat 1 91 0 1 920 189 0 0 0 chrX 44008478 44008499 -122641797 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 920 285 158 0 56 chrX 44008499 44008509 -122641787 + (TA)n Simple_repeat Simple_repeat 1 10 0 1 920 22 35 0 0 chrX 44008585 44008614 -122641682 + AT_rich Low_complexity Low_complexity 1 29 0 1 920 4851 48 0 2 chrX 44008839 44009429 -122640867 - L1Md_F2 LINE L1 -13 6569 5981 1 920 253 252 10 29 chrX 44009488 44009590 -122640706 + L1ME4a LINE L1 5819 5918 -206 1 920 473 308 33 44 chrX 44009755 44009935 -122640361 - Tigger12 DNA MER2_type -1214 745 568 1 920 225 169 0 0 chrX 44010522 44010581 -122639715 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 920 4132 115 76 24 chrX 44011655 44012369 -122637927 - RMER17A LTR ERVK 0 751 1 2 920 456 363 41 21 chrX 44012431 44012673 -122637623 - LTR89 LTR ERVL? -97 782 536 2 920 1658 265 54 21 chrX 44013552 44013772 -122636524 - RMER5 LTR ERV1 0 534 315 2 920 2165 189 60 76 chrX 44013772 44014310 -122635986 - RLTR24 LTR ERV1 0 529 1 2 920 1658 265 54 21 chrX 44014310 44014605 -122635691 - RMER5 LTR ERV1 -220 314 4 2 920 1691 81 0 0 chrX 44015345 44015596 -122634700 - L1_Mus1 LINE L1 0 6567 6341 2 920 2461 69 6 0 chrX 44015596 44015914 -122634382 + L1_Mus1 LINE L1 6006 6325 -242 2 920 4529 80 7 2 chrX 44016158 44016762 -122633534 - L1_Mus2 LINE L1 -1 6565 5959 2 920 2378 124 3 3 chrX 44016762 44017129 -122633167 + L1_Mm LINE L1 3467 3834 -2049 2 920 27 0 0 0 chrX 44017824 44017851 -122632445 + AT_rich Low_complexity Low_complexity 1 27 0 2 920 965 236 19 5 chrX 44017851 44018064 -122632232 - B3 SINE B2 0 216 1 2 920 422 344 0 24 chrX 44019732 44019896 -122630400 + RSINE1 SINE B4 4 163 -2 2 920 821 338 38 63 chrX 44020567 44020933 -122629363 + ORR1E LTR MaLR 3 359 0 3 920 2180 255 85 53 chrX 44021852 44022857 -122627439 + Lx9 LINE L1 5001 6054 -1590 3 920 406 131 0 97 chrX 44022857 44022882 -122627414 - Lx LINE L1 -4 6650 6627 3 920 3994 63 62 9 chrX 44022882 44023414 -122626882 + LTRIS2 LTR ERV1 5 564 0 3 920 406 131 0 97 chrX 44023414 44023481 -122626815 - Lx LINE L1 -28 6626 6567 3 920 1003 215 22 31 chrX 44023481 44023572 -122626724 + Lx9 LINE L1 6055 6090 -1554 3 920 4758 239 41 22 chrX 44023602 44024225 -122626071 + Lx9 LINE L1 6384 7026 -618 3 920 277 24 48 0 chrX 44024225 44024267 -122626029 + (CAA)n Simple_repeat Simple_repeat 2 45 0 3 920 4758 239 41 22 chrX 44024267 44024859 -122625437 + Lx9 LINE L1 7027 7622 -22 3 920 565 173 58 0 chrX 44025757 44025861 -122624435 - B1_Mur4 SINE Alu -36 114 5 3 920 411 21 0 0 chrX 44028216 44028264 -122622032 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 920 337 269 59 0 chrX 44028264 44028383 -122621913 + L1MA4 LINE L1 5805 5930 -370 3 920 30 0 0 0 chrX 44028554 44028584 -122621712 + AT_rich Low_complexity Low_complexity 1 30 0 3 920 1080 82 0 14 chrX 44028650 44028798 -122621498 + B1_Mus1 SINE Alu 2 147 -1 3 920 338 0 45 75 chrX 44028800 44028867 -122621429 + (CAAAAA)n Simple_repeat Simple_repeat 2 66 0 4 920 1761 107 102 23 chrX 44028872 44029177 -122621119 + Lx LINE L1 6325 6653 -1 4 920 1384 233 132 5 chrX 44029178 44029523 -122620773 + Lx9 LINE L1 7134 7516 -128 4 920 435 38 0 0 chrX 44029523 44029576 -122620720 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 920 1384 233 132 5 chrX 44029576 44029678 -122620618 + Lx9 LINE L1 7517 7638 -6 4 920 602 269 62 28 chrX 44030536 44030712 -122619584 + B3A SINE B2 1 182 -16 4 920 625 291 7 0 chrX 44031091 44031239 -122619057 - MER5A1 DNA MER1_type 0 166 18 4 920 588 275 62 73 chrX 44031255 44031571 -122618725 - L1ME1 LINE L1 -23 6156 5841 4 920 245 316 78 13 chrX 44031603 44031680 -122618616 + B1F1 SINE Alu 8 89 -60 4 920 471 255 123 40 chrX 44031704 44032150 -122618146 - L1ME1 LINE L1 -567 5612 5129 4 920 214 87 21 21 chrX 44032503 44032550 -122617746 + (TTTTG)n Simple_repeat Simple_repeat 1 47 0 4 920 1071 69 21 0 chrX 44032550 44032694 -122617602 - B1_Mus2 SINE Alu 0 147 1 4 920 327 280 70 30 chrX 44032745 44032944 -122617352 - L1ME1 LINE L1 -1404 4742 4536 4 920 1052 75 7 40 chrX 44033386 44033538 -122616758 + B1_Mm SINE Alu 1 147 0 5 920 302 289 142 42 chrX 44033599 44033909 -122616387 - L1ME1 LINE L1 -2115 4031 3691 4 920 681 290 93 19 chrX 44033956 44034213 -122616083 - Lx8 LINE L1 -579 6894 6619 5 920 310 284 11 74 chrX 44034328 44034423 -122615873 - Lx8 LINE L1 -586 6887 6799 5 920 25 0 0 0 chrX 44034531 44034556 -122615740 + AT_rich Low_complexity Low_complexity 1 25 0 5 920 245 122 0 0 chrX 44034565 44034606 -122615690 + L1VL1 LINE L1 1 41 -6381 5 920 5744 144 63 8 chrX 44035200 44036196 -122614100 - Lx2A1 LINE L1 0 7008 5958 5 920 827 215 85 40 chrX 44036236 44036435 -122613861 + ORR1C2 LTR MaLR 175 382 -2 5 920 380 394 121 3 chrX 44037204 44037584 -122612712 - MER70B LTR ERVL -137 441 17 5 920 282 254 50 17 chrX 44037779 44037899 -122612397 + L1MC LINE L1 4545 4668 -1478 5 920 4993 40 3 3 chrX 44038482 44039091 -122611205 + L1Md_F2 LINE L1 5973 6581 -1 5 920 473 340 67 19 chrX 44039299 44039659 -122610637 + L1MB3 LINE L1 4955 5331 -815 6 920 265 255 52 31 chrX 44039759 44039847 -122610449 + L1MB3 LINE L1 5550 5640 -544 6 920 249 119 0 0 chrX 44039847 44039889 -122610407 + (TA)n Simple_repeat Simple_repeat 1 42 0 6 920 246 323 10 48 chrX 44039945 44040049 -122610247 + L1MB3 LINE L1 5665 5764 -419 6 14 1078 250 139 18 chrX 44040050 44040380 -122609916 - ORR1D1 LTR MaLR 0 374 5 6 921 4934 241 47 29 chrX 44040426 44041611 -122608685 - ORR1D1-int LTR MaLR -42 1328 122 6 921 2311 112 3 84 chrX 44042326 44042717 -122607579 + RLTR10D LTR ERVK 1 359 0 6 921 1297 148 10 38 chrX 44042717 44043044 -122607252 + IAP-d-int LTR ERVK 1 503 -6039 6 921 3168 64 0 0 chrX 44043044 44043432 -122606864 + IAP-d-int LTR ERVK 5007 5394 -1148 6 921 4895 52 0 38 chrX 44043471 44043681 -122606615 + IAP-d-int LTR ERVK 5394 5603 -939 6 921 1853 120 103 101 chrX 44043681 44044155 -122606141 + IAPLTR2_Mm LTR ERVK 1 475 0 6 921 4895 52 0 38 chrX 44044155 44044597 -122605699 + IAP-d-int LTR ERVK 5604 6021 -521 6 921 3446 55 0 2 chrX 44044600 44045016 -122605280 + IAP-d-int LTR ERVK 6128 6542 0 6 921 2276 120 3 82 chrX 44045016 44045406 -122604890 + RLTR10D LTR ERVK 1 359 0 6 921 1840 181 40 11 chrX 44047488 44047841 -122602455 - RLTR30 LTR ERV1 -2 377 15 6 921 22169 54 5 1 chrX 44047868 44051420 -122598876 - L1Md_F3 LINE L1 0 6584 3040 6 921 911 145 47 0 chrX 44051422 44051594 -122598702 - L1_Mus3 LINE L1 -7 6631 6452 6 921 323 115 0 19 chrX 44051594 44051647 -122598649 + L1_Mus3 LINE L1 6361 6412 -154 6 921 245 306 0 0 chrX 44051673 44051735 -122598561 - ORR1D1-int LTR MaLR -1259 111 50 6 921 699 229 0 0 chrX 44051774 44051944 -122598352 + (TA)n Simple_repeat Simple_repeat 2 171 0 6 921 1583 223 19 0 chrX 44051954 44052272 -122598024 - MT2A LTR ERVL -209 324 1 6 921 633 298 31 42 chrX 44052272 44052626 -122597670 + L1MB3 LINE L1 5762 6111 -72 6 921 293 316 53 53 chrX 44052888 44053152 -122597144 + L1ME3A LINE L1 5896 6159 -14 7 921 379 308 26 0 chrX 44053955 44054072 -122596224 + ID_B1 SINE B4 104 223 -1 7 921 2320 223 49 66 chrX 44054258 44054484 -122595812 + RMER6A LTR ERVK 1 259 -431 7 921 762 81 0 0 chrX 44054484 44054595 -122595701 + (GAAA)n Simple_repeat Simple_repeat 1 111 0 7 921 2320 223 36 77 chrX 44054595 44055119 -122595177 + RMER6A LTR ERVK 253 756 0 7 921 517 251 50 0 chrX 44055236 44055455 -122594841 + L1M3 LINE L1 2812 3041 -3099 7 921 397 281 41 37 chrX 44055489 44055707 -122594589 + L1M3 LINE L1 3118 3336 -2807 7 921 407 358 34 10 chrX 44055712 44055921 -122594375 - MER57C2 LTR ERV1 -2 432 219 7 921 432 228 39 23 chrX 44056042 44056172 -122594124 - Lx7 LINE L1 -2 7694 7563 7 921 843 257 27 43 chrX 44056238 44056494 -122593802 - Lx7 LINE L1 -288 7408 7157 7 921 1441 309 5 9 chrX 44056517 44057069 -122593227 + L1M3 LINE L1 4394 4943 -1197 7 921 408 71 0 0 chrX 44057421 44057477 -122592819 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 921 255 61 0 0 chrX 44057529 44057562 -122592734 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 7 921 1083 56 7 21 chrX 44057562 44057707 -122592589 - B1_Mus1 SINE Alu -3 145 3 7 921 825 58 108 0 chrX 44058981 44059101 -122591195 - B1_Mus1 SINE Alu -1 147 15 8 921 330 240 167 53 chrX 44059030 44059162 -122591134 - MT2B LTR ERVL -360 241 95 8 921 5798 64 1 0 chrX 44059162 44059896 -122590400 - L1_Mm LINE L1 -240 5643 4909 8 921 550 358 57 10 chrX 44059897 44060106 -122590190 - B4 SINE B4 -66 226 8 8 921 1068 151 0 0 chrX 44060182 44060354 -122589942 - B2_Mm2 SINE B2 -21 174 3 8 921 1311 116 0 10 chrX 44060356 44060565 -122589731 + L1_Mus4 LINE L1 6399 6605 -31 8 921 7069 89 41 9 chrX 44060567 44062473 -122587823 + L1Md_F LINE L1 168 2136 -3747 8 921 2062 145 35 5 chrX 44062478 44062888 -122587408 - L1_Mm LINE L1 -1461 4422 3952 8 921 8964 53 2 0 chrX 44062895 44064027 -122586269 + L1Md_F2 LINE L1 4453 5586 -297 8 921 7684 63 1 6 chrX 44064027 44065015 -122585281 + L1Md_F2 LINE L1 5587 6569 -13 8 921 35 83 0 0 chrX 44065015 44065099 -122585197 + AT_rich Low_complexity Low_complexity 1 84 0 8 921 984 152 11 0 chrX 44065241 44065419 -122584877 + Lx2 LINE L1 6817 6996 -1 9 921 7911 141 42 8 chrX 44065506 44066805 -122583491 - Lx2 LINE L1 -1 6996 5655 9 921 11985 115 11 17 chrX 44066802 44068881 -122581415 - L1VL4 LINE L1 -743 2816 753 9 921 242 228 0 0 chrX 44068882 44068939 -122581357 + T-rich Low_complexity Low_complexity 1 57 0 9 921 7891 58 2 3 chrX 44068947 44070236 -122580060 - L1Md_F2 LINE L1 -2 6580 5294 9 921 3194 14 0 0 chrX 44070236 44070601 -122579695 - L1Md_A LINE L1 -1 6581 6217 9 921 7493 67 4 0 chrX 44070601 44070981 -122579315 - L1Md_F2 LINE L1 -590 5293 4910 9 921 2447 179 6 41 chrX 44070971 44071455 -122578841 - L1VL4 LINE L1 -5534 768 302 9 921 702 214 43 7 chrX 44071964 44072105 -122578191 + ORR1D1 LTR MaLR 1 146 -228 9 921 225 115 77 44 chrX 44073632 44073723 -122576573 + (TTATA)n Simple_repeat Simple_repeat 5 98 0 9 921 252 0 0 0 chrX 44074106 44074134 -122576162 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 9 921 207 0 0 0 chrX 44074144 44074167 -122576129 + (TTG)n Simple_repeat Simple_repeat 2 24 0 9 921 1071 66 0 7 chrX 44074167 44074305 -122575991 - B1_Mm SINE Alu -10 137 1 1 921 688 336 45 52 chrX 44074332 44074903 -122575393 - MLT2B4 LTR ERVL 0 560 1 1 921 655 301 98 14 chrX 44075522 44075739 -122574557 - ID_B1 SINE B4 -56 236 11 1 921 449 204 6 0 chrX 44075943 44076100 -122574196 + CT-rich Low_complexity Low_complexity 2 159 0 1 921 312 27 0 0 chrX 44076104 44076141 -122574155 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 921 300 367 39 35 chrX 44076212 44076415 -122573881 - B4 SINE B4 -21 271 68 1 921 380 306 8 31 chrX 44076732 44076860 -122573436 - MTC LTR MaLR -2 419 295 1 921 1148 188 5 19 chrX 44076956 44077162 -122573134 - MTC LTR MaLR -114 307 105 1 921 28365 113 20 11 chrX 44077196 44080838 -122569458 - L1_Mus2 LINE L1 -2 6567 2877 1 921 2669 57 16 139 chrX 44080838 44081283 -122569013 - RLTR10 LTR ERVK 0 390 1 1 921 28365 146 25 61 chrX 44081283 44083847 -122566449 - L1_Mus2 LINE L1 -3010 2876 418 1 921 555 165 0 10 chrX 44083863 44083961 -122566335 - MTC LTR MaLR -324 97 1 1 921 374 311 154 12 chrX 44085391 44085560 -122564736 + B3A SINE B2 1 193 -5 1 921 1083 201 50 0 chrX 44085571 44085790 -122564506 - L1_Mur3 LINE L1 -137 5743 5514 1 921 2864 204 19 45 chrX 44085787 44086404 -122563892 + Lx6 LINE L1 6532 7132 -328 1 921 227 308 153 8 chrX 44086447 44086578 -122563718 + Lx7 LINE L1 7169 7318 -378 1 921 411 38 0 0 chrX 44086604 44086657 -122563639 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 921 37 81 0 0 chrX 44086835 44086921 -122563375 + AT_rich Low_complexity Low_complexity 1 86 0 1 921 1758 258 84 35 chrX 44087222 44087876 -122562420 + Lx9 LINE L1 6959 7644 0 1 921 793 290 12 55 chrX 44087971 44088092 -122562204 - B3A SINE B2 0 216 108 1 921 1471 255 8 16 chrX 44088092 44088467 -122561829 - ORR1D1 LTR MaLR 0 374 3 1 921 793 281 11 28 chrX 44088467 44088578 -122561718 - B3A SINE B2 -89 109 1 1 921 352 210 12 12 chrX 44088802 44088884 -122561412 - L1MA4 LINE L1 -364 5936 5855 1 921 495 0 0 0 chrX 44089511 44089566 -122560730 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 1 921 225 183 0 0 chrX 44090439 44090499 -122559797 + (TCTG)n Simple_repeat Simple_repeat 1 60 0 1 921 426 20 0 0 chrX 44090504 44090555 -122559741 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 921 261 0 0 0 chrX 44090610 44090639 -122559657 + (CATAT)n Simple_repeat Simple_repeat 3 31 0 1 921 197 224 17 0 chrX 44091553 44091611 -122558685 + CT-rich Low_complexity Low_complexity 2 60 0 1 921 423 38 0 0 chrX 44092480 44092533 -122557763 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 921 1544 174 81 94 chrX 44093914 44094295 -122556001 - ORR1C1 LTR MaLR -2 376 1 1 921 4289 199 81 32 chrX 44094300 44095319 -122554977 - ORR1C1-int LTR MaLR -4 1505 438 1 921 976 163 20 45 chrX 44096021 44096220 -122554076 + URR1B DNA MER1_type 3 196 -29 1 921 2832 46 45 8 chrX 44096220 44096595 -122553701 + L1Md_F2 LINE L1 6190 6578 -4 1 921 339 63 48 0 chrX 44096861 44096924 -122553372 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 921 396 88 0 0 chrX 44096962 44097019 -122553277 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 921 722 222 14 7 chrX 44097938 44098083 -122552213 + B1_Mur4 SINE Alu 3 148 -2 1 921 381 22 0 0 chrX 44098739 44098785 -122551511 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 921 619 275 7 0 chrX 44098905 44099047 -122551249 + ID_B1 SINE B4 81 223 -1 1 921 208 310 36 16 chrX 44099104 44099229 -122551067 - MIR SINE MIR -57 151 28 1 921 762 375 73 45 chrX 44100745 44101236 -122549060 - MLT1H1 LTR MaLR -50 505 1 1 921 204 67 0 0 chrX 44101514 44101544 -122548752 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 1 921 405 0 0 0 chrX 44101559 44101604 -122548692 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 921 2034 274 64 33 chrX 44101642 44101957 -122548339 + Lx8 LINE L1 6131 6448 -1025 1 921 664 266 7 0 chrX 44101957 44102100 -122548196 + B1_Mur2 SINE Alu 5 148 -1 1 921 2034 274 64 33 chrX 44102100 44102474 -122547822 + Lx8 LINE L1 6449 6841 -632 1 921 423 187 0 51 chrX 44102459 44102538 -122547758 + Lx8 LINE L1 7036 7110 -363 1 921 277 297 0 0 chrX 44103223 44103297 -122546999 + Lx7 LINE L1 7036 7109 -587 1 921 3575 41 15 31 chrX 44104846 44105322 -122544974 - L1Md_F2 LINE L1 -1 6581 6114 1 921 874 209 15 50 chrX 44105837 44106038 -122544258 + ORR1C2 LTR MaLR 1 194 -190 1 921 363 96 0 0 chrX 44106038 44106090 -122544206 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 921 716 249 75 59 chrX 44106090 44106251 -122544045 + ORR1C2 LTR MaLR 149 308 -76 1 921 4392 127 59 16 chrX 44106251 44107026 -122543270 - RMER17D2 LTR ERVK 0 809 1 1 921 716 242 73 49 chrX 44107026 44107091 -122543205 + ORR1C2 LTR MaLR 309 382 -2 1 921 1096 268 40 10 chrX 44109042 44109344 -122540952 + MER58B DNA MER1_type 31 341 0 1 921 977 195 46 14 chrX 44109808 44110026 -122540270 + URR1A DNA MER1_type 1 225 -1 1 921 1008 307 31 58 chrX 44110229 44110405 -122539891 - Lx7 LINE L1 0 7696 7522 1 921 1006 133 0 22 chrX 44110405 44110589 -122539707 + GA-rich Low_complexity Low_complexity 1 180 0 1 921 1008 307 31 58 chrX 44110589 44110653 -122539643 - Lx7 LINE L1 -175 7521 7462 1 921 708 230 0 45 chrX 44110653 44110808 -122539488 + B1_Mur2 SINE Alu 1 148 -1 1 921 1008 307 31 58 chrX 44110808 44111154 -122539142 - Lx7 LINE L1 -235 7461 7125 1 921 22 35 0 0 chrX 44111239 44111268 -122539028 + AT_rich Low_complexity Low_complexity 1 29 0 1 921 2369 178 36 20 chrX 44111276 44111723 -122538573 - Lx4A LINE L1 -1 7057 6604 1 921 2105 127 3 0 chrX 44111813 44112128 -122538168 - Lx4A LINE L1 -451 6607 6292 1 921 471 312 49 18 chrX 44112311 44112474 -122537822 - MTE2b LTR MaLR 0 379 212 1 921 302 302 85 26 chrX 44112758 44112911 -122537385 + MIR SINE MIR 92 253 -9 1 921 602 349 82 18 chrX 44113156 44113486 -122536810 + MLT1A0 LTR MaLR 15 365 0 1 921 1795 192 34 20 chrX 44113778 44114133 -122536163 + ORR1C1 LTR MaLR 16 375 -3 1 921 181 388 15 0 chrX 44114257 44114324 -122535972 - L2a LINE L2 -55 3371 3304 1 921 299 248 0 0 chrX 44115527 44115628 -122534668 - L1_Mus4 LINE L1 -6 6630 6530 1 921 1117 82 0 7 chrX 44116494 44116641 -122533655 + B1_Mus1 SINE Alu 2 147 -1 1 921 396 0 0 0 chrX 44116753 44116797 -122533499 + (CATAT)n Simple_repeat Simple_repeat 2 45 0 1 921 279 230 143 48 chrX 44117546 44117651 -122532645 - B4 SINE B4 -14 278 164 1 921 25471 148 21 10 chrX 44118167 44122521 -122527775 + L1VL1 LINE L1 411 4823 -1060 1 921 4177 38 0 2 chrX 44122521 44123022 -122527274 + L1Md_F3 LINE L1 6083 6582 -2 1 921 25471 146 10 7 chrX 44123022 44123051 -122527245 + L1VL1 LINE L1 4824 4838 -1045 1 921 1046 31 8 0 chrX 44123051 44123181 -122527115 + (GAAAA)n Simple_repeat Simple_repeat 2 132 0 1 921 25471 146 10 7 chrX 44123181 44123948 -122526348 + L1VL1 LINE L1 4839 5616 -267 1 921 875 167 14 0 chrX 44124652 44124875 -122525421 + CT-rich Low_complexity Low_complexity 1 226 0 1 921 685 216 21 7 chrX 44124887 44125027 -122525269 - B1_Mur2 SINE Alu -1 148 7 1 921 1572 210 67 16 chrX 44125358 44125672 -122524624 + ORR1B1 LTR MaLR 10 339 -55 1 921 760 29 38 0 chrX 44125672 44125777 -122524519 + (GAAAA)n Simple_repeat Simple_repeat 2 110 0 1 921 6455 108 79 4 chrX 44125795 44126767 -122523529 + L1_Mus3 LINE L1 5588 6632 -6 1 921 297 0 0 0 chrX 44127641 44127674 -122522622 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 921 6286 231 67 24 chrX 44127952 44128616 -122521680 - MERVL_2A-int LTR ERVL -1540 4221 3544 1 921 1278 117 65 5 chrX 44128616 44128831 -122521465 - Lx LINE L1 -6 6648 6421 1 921 6286 231 67 24 chrX 44128831 44129713 -122520583 - MERVL_2A-int LTR ERVL -2218 3543 2609 1 921 4901 251 89 3 chrX 44129712 44131445 -122518851 - MERVL_2A-int LTR ERVL -3012 2473 694 1 921 1063 103 7 0 chrX 44131451 44131597 -122518699 + B1_Mus1 SINE Alu 2 148 0 1 921 336 48 0 0 chrX 44131597 44131639 -122518657 + (CAAAAA)n Simple_repeat Simple_repeat 6 47 0 1 921 573 280 64 49 chrX 44131987 44132190 -122518106 - B3 SINE B2 -10 206 1 1 921 342 0 0 0 chrX 44133055 44133093 -122517203 + (T)n Simple_repeat Simple_repeat 1 38 0 1 921 22 35 0 0 chrX 44133593 44133622 -122516674 + AT_rich Low_complexity Low_complexity 1 29 0 1 921 2408 256 66 29 chrX 44133981 44134816 -122515480 - L1_Mur3 LINE L1 -621 5259 4394 1 921 8908 9 0 0 chrX 44134820 44136428 -122513868 - L1Md_A LINE L1 0 6582 4975 1 921 1027 16 0 0 chrX 44136427 44136548 -122513748 + L1_Mm LINE L1 5343 5463 -420 1 921 7413 59 0 0 chrX 44136548 44137481 -122512815 + L1Md_T LINE L1 5650 6582 0 1 921 809 258 35 11 chrX 44137484 44137766 -122512530 - L1_Mur3 LINE L1 -2409 3471 3183 1 921 1473 272 113 60 chrX 44137778 44138565 -122511731 + Lx8 LINE L1 5276 6162 -1311 1 921 651 26 0 0 chrX 44138565 44138642 -122511654 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 921 827 329 133 62 chrX 44138642 44139020 -122511276 + Lx8 LINE L1 6163 6545 -928 1 921 309 346 39 8 chrX 44139018 44139146 -122511150 + Lx8 LINE L1 7122 7253 -220 1 921 23 0 0 0 chrX 44139414 44139437 -122510859 + AT_rich Low_complexity Low_complexity 1 23 0 1 921 682 255 112 9 chrX 44139471 44139685 -122510611 - ORR1D-int LTR MaLR -810 560 325 1 921 27 0 0 0 chrX 44139817 44139844 -122510452 + AT_rich Low_complexity Low_complexity 1 27 0 1 921 21 36 0 0 chrX 44140128 44140156 -122510140 + AT_rich Low_complexity Low_complexity 1 28 0 1 921 210 190 0 79 chrX 44141571 44141634 -122508662 + T-rich Low_complexity Low_complexity 2 59 0 1 921 21 0 0 0 chrX 44141671 44141692 -122508604 + AT_rich Low_complexity Low_complexity 1 21 0 1 921 304 77 39 0 chrX 44142027 44142079 -122508217 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 921 30 69 0 0 chrX 44144611 44144669 -122505627 + AT_rich Low_complexity Low_complexity 1 58 0 1 921 1026 233 56 36 chrX 44144723 44145026 -122505270 - ORR1D-int LTR MaLR -848 522 214 1 921 1672 308 120 35 chrX 44145092 44145308 -122504988 + Lx8 LINE L1 6049 6298 -1175 1 921 1298 225 64 28 chrX 44145308 44145466 -122504830 + ORR1D1 LTR MaLR 1 157 -217 1 921 666 68 0 0 chrX 44145466 44145554 -122504742 + (TC)n Simple_repeat Simple_repeat 1 88 0 1 921 1298 225 64 28 chrX 44145554 44145756 -122504540 + ORR1D1 LTR MaLR 158 373 -1 1 921 1672 308 120 35 chrX 44145756 44146296 -122504000 + Lx8 LINE L1 6299 6888 -585 1 921 1799 186 48 13 chrX 44146296 44146673 -122503623 + ORR1B1 LTR MaLR 5 394 0 1 921 1672 308 120 35 chrX 44146673 44146812 -122503484 + Lx8 LINE L1 6889 7022 -451 1 921 455 322 62 119 chrX 44146847 44147366 -122502930 - RLTR40 LTR ERVK -247 570 82 1 921 607 331 96 20 chrX 44147431 44147838 -122502458 + Lx8 LINE L1 7036 7473 0 1 921 1192 41 7 0 chrX 44147898 44148045 -122502251 + B1_Mus1 SINE Alu 1 148 0 1 921 180 77 0 0 chrX 44148049 44148075 -122502221 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 921 23 0 0 0 chrX 44148343 44148366 -122501930 + AT_rich Low_complexity Low_complexity 1 23 0 1 921 197 282 141 0 chrX 44148799 44148884 -122501412 - MIRm SINE MIR -93 183 87 1 921 33 56 0 0 chrX 44149105 44149159 -122501137 + AT_rich Low_complexity Low_complexity 1 54 0 2 921 1479 109 39 0 chrX 44149159 44149388 -122500908 - L1_Mus3 LINE L1 -8 6630 6393 2 921 189 0 0 0 chrX 44150109 44150130 -122500166 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2 921 312 242 12 61 chrX 44150543 44150652 -122499644 - MLT1G3 LTR MaLR -12 583 437 2 921 302 397 43 5 chrX 44150665 44150850 -122499446 - RMER15 LTR ERVL -40 535 344 2 921 296 321 57 31 chrX 44151297 44151409 -122498887 - MLT1H1 LTR MaLR -334 257 147 2 921 3446 193 56 6 chrX 44151555 44152218 -122498078 + Lx5 LINE L1 6344 7039 -11 2 921 336 164 0 0 chrX 44152299 44152366 -122497930 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 921 8856 10 1 0 chrX 44152453 44153913 -122496383 - L1Md_A LINE L1 0 6582 5122 2 921 27956 21 0 1 chrX 44153913 44157959 -122492337 - L1Md_T LINE L1 0 6582 2566 2 921 10807 9 0 0 chrX 44157959 44159187 -122491109 - L1_Mm LINE L1 -748 5135 3908 2 921 268 310 33 30 chrX 44159203 44159309 -122490987 - MLT1H1 LTR MaLR -452 103 1 2 921 242 356 74 69 chrX 44159314 44159516 -122490780 - MLT1H1 LTR MaLR -6 549 347 2 921 21 71 0 0 chrX 44159971 44160013 -122490283 + AT_rich Low_complexity Low_complexity 1 42 0 2 921 293 300 140 40 chrX 44160420 44160670 -122489626 + B4 SINE B4 2 276 -16 2 921 306 0 0 0 chrX 44160917 44160951 -122489345 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 921 588 312 72 42 chrX 44161336 44161600 -122488696 - MLT1H1-int LTR MaLR -887 522 251 2 921 446 389 39 19 chrX 44161858 44162115 -122488181 - MLT1H1 LTR MaLR -12 543 282 2 921 280 278 126 18 chrX 44162208 44162317 -122487979 + B1F2 SINE Alu 1 113 -4 2 921 275 414 7 7 chrX 44162322 44162463 -122487833 - MLT1H1 LTR MaLR -441 150 10 2 921 1488 243 13 3 chrX 44162504 44162822 -122487474 + Lx6 LINE L1 7140 7460 0 2 921 298 362 16 49 chrX 44162844 44163027 -122487269 - MIRb SINE MIR -11 257 81 2 921 22 35 0 0 chrX 44163110 44163139 -122487157 + AT_rich Low_complexity Low_complexity 1 29 0 2 921 26 50 0 0 chrX 44163376 44163416 -122486880 + AT_rich Low_complexity Low_complexity 1 40 0 2 921 375 23 0 0 chrX 44163703 44163747 -122486549 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 921 315 0 0 0 chrX 44163747 44163781 -122486515 + (GA)n Simple_repeat Simple_repeat 1 35 0 2 921 482 329 46 17 chrX 44166867 44167040 -122483256 - MIRb SINE MIR -21 247 70 2 921 267 335 112 58 chrX 44168236 44168566 -122481730 - L2a LINE L2 -7 3419 3072 2 921 21 0 0 0 chrX 44168867 44168888 -122481408 + AT_rich Low_complexity Low_complexity 1 21 0 2 921 651 309 27 27 chrX 44169025 44169427 -122480869 + L1_Mur3 LINE L1 5005 5406 -474 2 115 33106 68 1 3 chrX 44169432 44174651 -122475645 + L1Md_F2 LINE L1 285 5589 -297 2 922 7832 57 5 9 chrX 44174651 44175650 -122474646 + L1Md_F2 LINE L1 5590 6584 -1 2 922 1086 300 43 30 chrX 44175651 44176119 -122474177 + L1_Rod LINE L1 5374 5847 0 2 922 966 291 109 13 chrX 44176227 44176540 -122473756 - ORR1D2 LTR MaLR -27 343 1 2 922 578 289 61 6 chrX 44176540 44176721 -122473575 + Lx8 LINE L1 6623 6813 -660 2 922 3174 152 26 22 chrX 44176738 44177276 -122473020 + RLTR25B LTR ERVK 1 540 -488 2 922 665 323 18 63 chrX 44177276 44177610 -122472686 + Lx8 LINE L1 7153 7471 -2 2 922 639 182 0 0 chrX 44177616 44177742 -122472554 + (TA)n Simple_repeat Simple_repeat 1 126 0 2 922 1168 188 9 13 chrX 44177772 44177998 -122472298 + URR1B DNA MER1_type 1 225 0 2 922 399 342 54 14 chrX 44178004 44178152 -122472144 + RSINE1 SINE B4 11 164 -1 2 922 203 61 30 0 chrX 44178152 44178185 -122472111 + (TAA)n Simple_repeat Simple_repeat 3 36 0 2 922 329 330 50 20 chrX 44178385 44178517 -122471779 - MIR SINE MIR -63 145 14 2 922 21 0 0 0 chrX 44178568 44178589 -122471707 + AT_rich Low_complexity Low_complexity 1 21 0 2 922 503 107 0 12 chrX 44178972 44179057 -122471239 + (TA)n Simple_repeat Simple_repeat 2 85 0 2 922 217 387 64 25 chrX 44179156 44179360 -122470936 + L3 LINE CR1 3850 4061 -428 2 922 324 0 0 0 chrX 44179797 44179833 -122470463 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 922 916 255 69 42 chrX 44179833 44180095 -122470201 + RLTR20B3 LTR ERVK 291 559 -18 2 922 208 357 58 42 chrX 44180414 44180534 -122469762 - L3 LINE CR1 -53 4436 4315 2 922 446 325 38 0 chrX 44180622 44180782 -122469514 - Lx8 LINE L1 -467 7006 6841 2 922 1032 105 21 0 chrX 44180844 44180987 -122469309 + B1_Mus2 SINE Alu 2 147 0 2 922 577 200 7 14 chrX 44180987 44181129 -122469167 + GA-rich Low_complexity Low_complexity 4 144 0 2 922 405 0 0 0 chrX 44181675 44181720 -122468576 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 922 313 203 0 69 chrX 44185126 44185213 -122465083 - B1_Mur2 SINE Alu -36 113 36 2 922 360 94 0 0 chrX 44186254 44186307 -122463989 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 922 1774 299 149 26 chrX 44186325 44187171 -122463125 - Lx4B LINE L1 -78 6980 6031 2 922 2833 174 44 5 chrX 44187168 44187867 -122462429 + Lx5 LINE L1 5300 6043 -1007 2 922 295 301 40 40 chrX 44188165 44188314 -122461982 - CYRA11_Mm Unknown Y-chromosome -297 320 172 2 922 736 178 15 0 chrX 44188180 44188315 -122461981 + URR1B DNA MER1_type 89 225 0 2 922 23 86 0 0 chrX 44188418 44188476 -122461820 + AT_rich Low_complexity Low_complexity 1 58 0 2 922 239 311 40 13 chrX 44188540 44188615 -122461681 + ID SINE ID 5 81 -143 2 922 269 380 13 53 chrX 44188797 44188947 -122461349 + Lx8 LINE L1 7076 7219 -254 2 922 282 368 0 0 chrX 44188961 44189056 -122461240 + RMER15 LTR ERVL 371 465 -110 2 922 195 42 0 0 chrX 44189057 44189081 -122461215 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 922 5528 80 32 26 chrX 44189140 44189794 -122460502 + RLTR13C2 LTR ERVK 1 651 -157 2 922 4569 53 36 3 chrX 44189794 44190380 -122459916 + L1Md_F2 LINE L1 5978 6582 0 2 922 5528 80 32 26 chrX 44190380 44190526 -122459770 + RLTR13C2 LTR ERVK 652 805 -3 2 922 25 90 0 0 chrX 44190562 44190629 -122459667 + AT_rich Low_complexity Low_complexity 1 67 0 2 922 207 139 0 0 chrX 44190741 44190777 -122459519 + (TCTA)n Simple_repeat Simple_repeat 2 37 0 2 922 1179 347 21 20 chrX 44191824 44192385 -122457911 - Lx8 LINE L1 -105 7368 6807 2 922 201 304 95 32 chrX 44192950 44193045 -122457251 - L2c LINE L2 -40 3347 3247 2 922 2210 122 0 3 chrX 44193149 44193478 -122456818 - Lx2A1 LINE L1 0 7008 6681 2 922 292 326 21 0 chrX 44194264 44194359 -122455937 + ORR1E LTR MaLR 4 100 -259 2 922 2101 134 6 3 chrX 44194375 44194696 -122455600 + L1Md_F LINE L1 8 329 -6190 2 922 2727 44 0 3 chrX 44194702 44195041 -122455255 + L1Md_F2 LINE L1 6245 6582 0 2 922 242 323 20 30 chrX 44195056 44195155 -122455141 + ORR1E LTR MaLR 120 217 -142 2 922 209 320 80 0 chrX 44195267 44195367 -122454929 - MIR SINE MIR -88 174 67 2 922 450 0 0 0 chrX 44195371 44195421 -122454875 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 922 306 252 152 0 chrX 44197339 44197438 -122452858 - PB1D7 SINE Alu -6 114 1 2 922 4823 62 16 6 chrX 44197859 44198488 -122451808 - L1Md_F2 LINE L1 0 6582 5948 2 922 6375 82 8 10 chrX 44199336 44200219 -122450077 - L1_Mus2 LINE L1 -3 6563 5683 2 922 2805 193 64 71 chrX 44200232 44200785 -122449511 + L1Md_F LINE L1 312 858 -5661 2 922 2391 51 0 0 chrX 44200785 44201080 -122449216 + L1Md_A LINE L1 6287 6581 -1 2 922 2805 153 32 42 chrX 44201080 44201587 -122448709 + L1Md_F LINE L1 852 1354 -2463 2 922 1050 247 64 5 chrX 44201707 44202081 -122448215 - L1MA6 LINE L1 -56 6244 5849 2 922 411 38 0 0 chrX 44202628 44202681 -122447615 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 922 189 0 0 0 chrX 44202692 44202713 -122447583 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 2 922 505 314 112 11 chrX 44203382 44203569 -122446727 + ID_B1 SINE B4 3 208 -16 2 922 973 111 34 45 chrX 44203690 44203869 -122446427 + L1_Mus3 LINE L1 6456 6632 -6 2 922 591 74 0 0 chrX 44203881 44203962 -122446334 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 2 922 320 64 21 0 chrX 44203962 44204008 -122446288 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 922 511 95 14 0 chrX 44204281 44204355 -122445941 - BGLII_B LTR ERVK 0 441 367 2 922 446 358 93 30 chrX 44204535 44204869 -122445427 + MLT1A1 LTR MaLR 41 395 -13 2 922 731 196 18 31 chrX 44204999 44205162 -122445134 + B2_Mm2 SINE B2 1 161 -34 2 922 423 0 0 0 chrX 44205162 44205209 -122445087 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 2 922 189 0 0 0 chrX 44206964 44206985 -122443311 + (ATG)n Simple_repeat Simple_repeat 2 22 0 2 922 2172 67 30 20 chrX 44207009 44207313 -122442983 - IAPLTR2b LTR ERVK -20 307 1 2 922 649 261 135 5 chrX 44208402 44208595 -122441701 - Lx8 LINE L1 -253 7220 7003 2 922 465 34 0 0 chrX 44208719 44208778 -122441518 + (TC)n Simple_repeat Simple_repeat 1 59 0 2 922 375 78 0 0 chrX 44208778 44208828 -122441468 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 922 27 49 0 0 chrX 44208861 44208902 -122441394 + AT_rich Low_complexity Low_complexity 1 41 0 2 922 3823 205 77 45 chrX 44208927 44209585 -122440711 - Lx9 LINE L1 0 7644 6968 2 922 423 0 0 0 chrX 44209585 44209632 -122440664 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 922 378 0 0 0 chrX 44209632 44209673 -122440623 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 922 3823 205 77 45 chrX 44209673 44209923 -122440373 - Lx9 LINE L1 -677 6967 6707 2 922 722 263 37 11 chrX 44209932 44210120 -122440176 - Lx8 LINE L1 -459 7014 6822 2 922 31 58 0 0 chrX 44210222 44210274 -122440022 + AT_rich Low_complexity Low_complexity 1 52 0 2 922 468 0 0 0 chrX 44211503 44211555 -122438741 + (TTA)n Simple_repeat Simple_repeat 3 54 0 2 922 973 238 19 8 chrX 44211636 44211903 -122438393 - L1MB1 LINE L1 -19 6170 5901 2 922 234 189 0 0 chrX 44211941 44211994 -122438302 - L1MA6 LINE L1 -22 6278 6226 2 922 223 222 19 0 chrX 44211995 44212049 -122438247 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 922 23 33 0 0 chrX 44212114 44212144 -122438152 + AT_rich Low_complexity Low_complexity 1 30 0 2 922 354 305 37 123 chrX 44212332 44212566 -122437730 - L1MB1 LINE L1 -1081 5059 4854 2 922 4905 73 0 11 chrX 44212566 44213220 -122437076 + L1Md_F2 LINE L1 5934 6580 -2 3 922 354 305 37 123 chrX 44213220 44213359 -122436937 - L1MB1 LINE L1 -1287 4853 4718 2 922 2703 303 64 35 chrX 44213403 44213998 -122436298 + Lx9 LINE L1 6415 7036 -608 3 922 387 0 0 0 chrX 44213998 44214041 -122436255 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 922 2703 303 64 35 chrX 44214041 44214638 -122435658 + Lx9 LINE L1 7037 7641 -3 3 922 309 298 17 42 chrX 44214875 44214994 -122435302 - L1MB1 LINE L1 -1455 4688 4573 2 922 9282 109 16 28 chrX 44215001 44215592 -122434704 + L1_Mm LINE L1 4304 4862 -1021 3 922 1246 90 11 0 chrX 44215592 44215769 -122434527 - L1_Mus1 LINE L1 -1 6566 6388 3 922 9282 109 16 28 chrX 44215769 44216635 -122433661 + L1_Mm LINE L1 4863 5743 -140 3 922 341 61 20 20 chrX 44216823 44216873 -122433423 + L1_Mus4 LINE L1 6130 6179 -457 3 922 1003 281 16 8 chrX 44216884 44217128 -122433168 - Lx8 LINE L1 -244 7229 6984 3 922 25 31 0 0 chrX 44217210 44217242 -122433054 + AT_rich Low_complexity Low_complexity 1 32 0 3 922 1690 271 138 50 chrX 44217253 44218562 -122431734 - L1MB1 LINE L1 -1811 4329 2906 2 922 1809 215 3 3 chrX 44218622 44218949 -122431347 - Lx5 LINE L1 -365 6685 6359 3 922 2757 168 62 46 chrX 44218959 44219618 -122430678 - Lx5 LINE L1 -856 6194 5521 3 922 233 296 0 0 chrX 44219652 44219723 -122430573 - L1MB1 LINE L1 -3408 2732 2662 2 922 342 67 0 0 chrX 44219822 44219867 -122430429 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 922 327 372 33 0 chrX 44219873 44219994 -122430302 - B4A SINE B4 -2 290 166 3 922 759 253 77 49 chrX 44220620 44220969 -122429327 - RLTR15 LTR ERVK 0 359 1 3 922 1680 246 76 3 chrX 44221246 44221629 -122428667 - MTD LTR MaLR -8 411 1 3 922 618 14 0 0 chrX 44221805 44221876 -122428420 + (TA)n Simple_repeat Simple_repeat 1 71 0 3 922 267 385 75 36 chrX 44222272 44222579 -122427717 - MLT1I LTR MaLR -10 401 83 3 922 489 316 18 88 chrX 44223149 44223375 -122426921 - B4A SINE B4 0 292 83 3 922 529 306 44 66 chrX 44223389 44223753 -122426543 - Lx8 LINE L1 0 7473 7118 3 922 420 256 11 11 chrX 44223753 44223840 -122426456 - B4A SINE B4 -196 96 10 3 922 1593 68 0 0 chrX 44224179 44224385 -122425911 - MTB LTR MaLR 0 400 195 3 922 1377 78 0 0 chrX 44224369 44224549 -122425747 - MT2C_Mm LTR ERVL -295 180 1 3 922 324 188 0 0 chrX 44225312 44225376 -122424920 + CT-rich Low_complexity Low_complexity 2 65 0 3 922 4827 21 0 0 chrX 44226100 44226663 -122423633 + L1Md_T LINE L1 5024 5586 -297 3 922 8409 33 1 0 chrX 44226663 44227658 -122422638 + L1Md_T LINE L1 5587 6582 0 3 922 212 222 22 22 chrX 44227991 44228037 -122422259 + L2c LINE L2 3113 3158 -229 3 922 23 0 0 0 chrX 44228280 44228303 -122421993 + AT_rich Low_complexity Low_complexity 1 23 0 3 922 22 0 0 0 chrX 44230090 44230112 -122420184 + AT_rich Low_complexity Low_complexity 1 22 0 3 922 234 250 36 0 chrX 44230301 44230357 -122419939 + BLACKJACK DNA AcHobo 2883 2940 -4 3 922 730 246 50 30 chrX 44232279 44232480 -122417816 + B3 SINE B2 1 205 -11 3 922 594 290 30 15 chrX 44232609 44232742 -122417554 + RSINE1 SINE B4 31 165 0 3 922 294 284 0 0 chrX 44233796 44233870 -122416426 - MER5A1 DNA MER1_type -1 165 92 3 922 360 140 0 0 chrX 44234084 44234141 -122416155 - ORR1D2 LTR MaLR 0 370 314 3 922 367 291 45 144 chrX 44234193 44234394 -122415902 + B3 SINE B2 2 182 -34 3 922 456 241 0 0 chrX 44234394 44234510 -122415786 + (TATG)n Simple_repeat Simple_repeat 1 116 0 3 922 318 220 0 0 chrX 44234924 44235024 -122415272 + CT-rich Low_complexity Low_complexity 3 102 0 3 922 808 144 0 36 chrX 44235026 44235163 -122415133 - B1_Mur3 SINE Alu -7 142 11 3 922 365 354 21 48 chrX 44236913 44237100 -122413196 + MIRb SINE MIR 53 234 -34 3 922 447 281 94 52 chrX 44237197 44237430 -122412866 + MIR SINE MIR 19 261 -1 3 922 7448 87 24 1 chrX 44238989 44240060 -122410236 + L1_Mus3 LINE L1 5529 6621 -17 3 922 1052 323 77 26 chrX 44240211 44240742 -122409554 - Lx8 LINE L1 -76 7397 6840 3 922 285 292 0 0 chrX 44240742 44240807 -122409489 + B3 SINE B2 2 66 -150 3 922 264 291 0 11 chrX 44240905 44240992 -122409304 - Lx8 LINE L1 -616 6857 6772 3 922 416 51 17 0 chrX 44241011 44241070 -122409226 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 922 240 379 19 37 chrX 44241347 44241454 -122408842 + MER5A DNA MER1_type 72 176 -13 3 922 228 361 55 9 chrX 44241472 44241581 -122408715 + L2c LINE L2 3042 3155 -232 3 922 264 275 75 0 chrX 44241766 44241846 -122408450 - MTEb LTR MaLR 0 379 294 3 922 235 350 10 0 chrX 44241935 44242032 -122408264 + GA-rich Low_complexity Low_complexity 3 100 0 3 922 3155 72 47 7 chrX 44242372 44242817 -122407479 - L1Md_F2 LINE L1 0 6582 6120 3 922 469 280 64 93 chrX 44243307 44243618 -122406678 - RMER10A LTR ERVL -19 423 122 3 922 490 331 51 0 chrX 44243740 44243897 -122406399 + B3A SINE B2 1 165 -33 3 922 345 93 0 0 chrX 44243902 44243956 -122406340 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 922 21 0 0 0 chrX 44244065 44244086 -122406210 + AT_rich Low_complexity Low_complexity 1 21 0 3 922 802 191 7 33 chrX 44244140 44244292 -122406004 - B1_Mur3 SINE Alu 0 149 2 3 922 357 347 45 26 chrX 44244161 44244315 -122405981 - B4 SINE B4 -69 223 67 3 922 339 85 0 0 chrX 44244643 44244690 -122405606 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 922 282 281 0 12 chrX 44244924 44245007 -122405289 + ID4 SINE ID 2 83 0 3 922 392 283 83 19 chrX 44246057 44246295 -122404001 + B4A SINE B4 2 289 -3 3 922 250 186 57 0 chrX 44246303 44246373 -122403923 + (CATA)n Simple_repeat Simple_repeat 2 75 0 3 922 21 0 0 0 chrX 44247504 44247525 -122402771 + AT_rich Low_complexity Low_complexity 1 21 0 3 922 538 267 34 34 chrX 44247684 44247917 -122402379 - RLTR15 LTR ERVK -82 277 45 3 922 301 206 35 30 chrX 44247994 44248109 -122402187 - L1_Mur3 LINE L1 -2446 3434 3317 3 922 255 300 25 0 chrX 44248145 44248297 -122401999 + (TA)n Simple_repeat Simple_repeat 1 155 0 3 922 362 292 0 19 chrX 44248298 44248406 -122401890 - Lx8 LINE L1 -1285 6188 6083 3 922 285 326 29 14 chrX 44248426 44248566 -122401730 - L1_Mur3 LINE L1 -2555 3325 3184 3 922 677 284 75 45 chrX 44248569 44248968 -122401328 - L1_Mur3 LINE L1 -2815 3065 2655 3 922 2255 244 49 24 chrX 44249038 44249790 -122400506 + L1_Mur3 LINE L1 3561 4331 -1549 3 922 216 279 16 0 chrX 44249790 44249851 -122400445 + ID_B1 SINE B4 64 125 -99 3 922 198 0 0 0 chrX 44249872 44249894 -122400402 + (GGA)n Simple_repeat Simple_repeat 2 23 0 3 922 1104 82 7 0 chrX 44250535 44250681 -122399615 + B1_Mus2 SINE Alu 1 147 0 3 922 273 89 0 0 chrX 44250682 44250727 -122399569 + (A)n Simple_repeat Simple_repeat 1 45 0 3 922 302 263 0 0 chrX 44251009 44251066 -122399230 + RSINE1 SINE B4 3 59 -106 3 922 785 299 4 30 chrX 44251061 44251292 -122399004 - MTEa-int LTR MaLR -1330 250 26 3 922 687 272 11 32 chrX 44251311 44251497 -122398799 - MTEa LTR MaLR -2 377 196 3 922 338 260 0 0 chrX 44251477 44251550 -122398746 - MTEa LTR MaLR -306 73 1 3 922 459 0 0 0 chrX 44251945 44251996 -122398300 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 922 26 0 0 0 chrX 44251996 44252022 -122398274 + AT_rich Low_complexity Low_complexity 1 26 0 3 922 28 0 0 0 chrX 44252668 44252696 -122397600 + AT_rich Low_complexity Low_complexity 1 28 0 3 922 264 220 0 0 chrX 44252992 44253042 -122397254 + ID_B1 SINE B4 112 161 -63 3 922 217 299 103 13 chrX 44253042 44253070 -122397226 + PB1D10 SINE Alu 31 115 -2 3 922 461 331 75 17 chrX 44253405 44253752 -122396544 - L1MA9 LINE L1 -79 6233 5867 3 922 25 51 0 0 chrX 44254953 44254992 -122395304 + AT_rich Low_complexity Low_complexity 1 39 0 3 922 443 267 22 44 chrX 44255373 44255510 -122394786 + MTEa LTR MaLR 242 375 -4 3 922 783 316 26 3 chrX 44255878 44256180 -122394116 + L1MC1 LINE L1 5990 6298 -35 3 922 866 71 158 0 chrX 44256327 44256454 -122393842 + B1_Mus2 SINE Alu 1 147 0 3 922 184 54 0 75 chrX 44256454 44256494 -122393802 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 3 922 275 367 81 23 chrX 44256701 44256874 -122393422 - L2a LINE L2 -251 3175 2993 3 922 24 0 0 0 chrX 44257286 44257310 -122392986 + AT_rich Low_complexity Low_complexity 1 24 0 3 922 325 260 87 29 chrX 44257434 44257537 -122392759 - Kanga2_a DNA Tc2 -340 548 440 3 922 235 211 0 0 chrX 44257600 44257652 -122392644 - L1ME3 LINE L1 -6 6156 6105 3 922 29 0 0 0 chrX 44257913 44257942 -122392354 + AT_rich Low_complexity Low_complexity 1 29 0 3 922 660 323 36 5 chrX 44257969 44258190 -122392106 - Lx5 LINE L1 0 7050 6823 3 922 510 289 79 31 chrX 44258368 44258711 -122391585 - L1M2 LINE L1 -899 5247 4890 3 922 429 81 0 0 chrX 44258721 44258783 -122391513 + (TCTA)n Simple_repeat Simple_repeat 3 64 0 3 922 2726 100 17 5 chrX 44258784 44259195 -122391101 - BGLII LTR ERVK -5 416 1 3 922 2061 188 104 9 chrX 44259197 44259771 -122390525 - RMER3D-int LTR ERVK -2 2324 1696 3 922 504 44 0 93 chrX 44259771 44259784 -122390512 - L1_Mus3 LINE L1 -208 6430 6424 3 922 3730 117 22 112 chrX 44259784 44260609 -122389687 - RMER17A LTR ERVK 0 751 1 3 922 504 44 0 93 chrX 44260609 44260670 -122389626 - L1_Mus3 LINE L1 -215 6423 6363 3 922 2509 177 104 71 chrX 44260683 44261328 -122388968 - RMER3D-int LTR ERVK -1163 1679 1014 3 922 284 234 106 71 chrX 44261369 44261539 -122388757 + RMER17A LTR ERVK 328 503 -248 3 922 847 180 0 43 chrX 44261677 44261886 -122388410 - RMER3D-int LTR ERVK -1991 851 652 3 922 591 110 44 0 chrX 44261898 44261989 -122388307 - RMER3D-int LTR ERVK -2259 583 489 3 922 1074 77 0 0 chrX 44262175 44262318 -122387978 + BGLII LTR ERVK 279 421 0 3 922 344 262 81 54 chrX 44262631 44262718 -122387578 - L1M3e LINE L1 -3679 3421 3335 3 922 1164 165 0 18 chrX 44262718 44262940 -122387356 - Lx2B LINE L1 0 7000 6783 3 922 344 262 81 54 chrX 44262940 44263074 -122387222 - L1M3e LINE L1 -3766 3334 3194 3 922 4084 268 60 29 chrX 44263532 44265089 -122385207 - RMER1A Other Other -40 990 2 3 922 189 74 0 0 chrX 44265351 44265378 -122384918 + (ATTTG)n Simple_repeat Simple_repeat 2 28 0 3 922 260 287 39 19 chrX 44265549 44265652 -122384644 - L1M3e LINE L1 -6920 110 6 3 922 398 330 119 67 chrX 44265723 44266203 -122384093 - L1M5 LINE L1 -1053 5093 4589 3 922 495 375 47 7 chrX 44266535 44266812 -122383484 - B4 SINE B4 -4 288 1 3 922 342 243 40 0 chrX 44267239 44267313 -122382983 - B3 SINE B2 -134 82 6 3 922 6290 210 41 11 chrX 44267901 44269911 -122380385 + Lx5 LINE L1 4850 7047 -3 3 922 584 243 169 0 chrX 44269928 44270105 -122380191 + B3 SINE B2 1 207 -9 3 922 821 186 0 11 chrX 44270523 44270697 -122379599 + CT-rich Low_complexity Low_complexity 1 172 0 3 922 229 299 0 67 chrX 44270704 44270808 -122379488 - PB1D9 SINE Alu 0 120 24 4 922 237 309 58 26 chrX 44270818 44271044 -122379252 - L1M5 LINE L1 -3192 2954 2722 4 922 180 125 0 0 chrX 44271905 44271937 -122378359 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 922 934 337 82 6 chrX 44273140 44273762 -122376534 + Lx8 LINE L1 6765 7433 -40 4 922 21 0 0 0 chrX 44273795 44273816 -122376480 + AT_rich Low_complexity Low_complexity 1 21 0 4 922 2258 33 4 0 chrX 44273911 44274186 -122376110 - L1Md_F3 LINE L1 -467 6117 5842 4 922 727 66 66 0 chrX 44274187 44274308 -122375988 + L1Md_F3 LINE L1 6456 6584 0 4 922 1241 254 34 42 chrX 44274375 44274869 -122375427 + L1_Rod LINE L1 4474 4963 -884 4 922 3088 258 31 52 chrX 44274994 44275905 -122374391 + Lx9 LINE L1 6300 7191 -453 4 922 1996 22 0 0 chrX 44275901 44276131 -122374165 + L1Md_T LINE L1 5356 5585 -298 4 922 8322 37 2 0 chrX 44276132 44277124 -122373172 + L1Md_T LINE L1 5587 6580 -2 4 922 1113 81 0 0 chrX 44277145 44277293 -122373003 + B1_Mus1 SINE Alu 1 148 0 4 922 321 231 317 31 chrX 44277321 44277482 -122372814 + Lx9 LINE L1 7187 7393 -251 4 922 982 132 33 7 chrX 44277482 44277635 -122372661 + RLTR20A LTR ERVK 1 157 -384 4 922 18718 126 4 8 chrX 44277753 44281381 -122368915 - L1_Mus4 LINE L1 -5 6631 3017 4 922 1897 22 9 0 chrX 44281381 44281607 -122368689 - L1Md_A LINE L1 0 6582 6355 4 922 18718 138 5 10 chrX 44281607 44281825 -122368471 - L1_Mus4 LINE L1 -2867 3016 2803 4 922 5081 121 9 4 chrX 44281826 44282709 -122367587 - L1VL4 LINE L1 -2483 1076 189 4 922 2162 196 86 29 chrX 44282712 44283226 -122367070 + MYSERV16_I-int LTR ERVK 390 932 -1394 4 922 5557 156 80 12 chrX 44283222 44284408 -122365888 + MYSERV16_I-int LTR ERVK 1058 2324 -2 4 922 1369 201 11 22 chrX 44284420 44284695 -122365601 + RLTR20A LTR ERVK 36 307 -234 4 922 1358 186 13 13 chrX 44284971 44285210 -122365086 + RLTR20A LTR ERVK 302 540 -1 4 922 454 141 0 25 chrX 44285211 44285291 -122365005 + Lx9 LINE L1 7388 7465 -179 4 922 396 40 0 0 chrX 44285294 44285344 -122364952 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 922 600 295 59 24 chrX 44285394 44285564 -122364732 + B3A SINE B2 1 176 -22 4 922 2181 174 12 5 chrX 44287816 44288242 -122362054 + L1_Mm LINE L1 4983 5411 -472 4 922 7617 90 4 6 chrX 44288245 44289760 -122360536 + L1_Mus3 LINE L1 5129 6638 0 4 922 385 322 33 33 chrX 44289814 44289936 -122360360 - B1F SINE Alu -19 130 9 4 922 599 284 64 15 chrX 44290629 44290833 -122359463 - B3 SINE B2 -1 215 2 4 922 435 38 0 0 chrX 44290945 44290998 -122359298 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 922 225 0 0 0 chrX 44291324 44291349 -122358947 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 922 883 237 33 48 chrX 44291637 44291907 -122358389 + Lx7 LINE L1 7166 7431 -265 4 922 467 190 57 16 chrX 44291981 44292104 -122358192 + Lx7 LINE L1 7569 7696 0 4 922 29 0 0 0 chrX 44293673 44293702 -122356594 + AT_rich Low_complexity Low_complexity 1 29 0 4 922 240 347 51 0 chrX 44293702 44293800 -122356496 - MIR SINE MIR -157 105 3 4 922 498 309 33 0 chrX 44293916 44294068 -122356228 + MER3 DNA MER1_type 53 209 0 4 922 25 0 0 0 chrX 44294527 44294552 -122355744 + AT_rich Low_complexity Low_complexity 1 25 0 4 922 228 261 0 0 chrX 44294719 44294765 -122355531 - MIR SINE MIR -88 174 129 4 922 291 85 0 0 chrX 44295393 44295440 -122354856 + (TTTTG)n Simple_repeat Simple_repeat 4 50 0 4 922 244 216 0 0 chrX 44295732 44295783 -122354513 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 922 505 319 141 34 chrX 44295796 44296059 -122354237 - B4A SINE B4 -1 291 1 4 922 250 228 12 60 chrX 44296104 44296188 -122354108 - L1ME2 LINE L1 -60 6104 6025 4 922 1227 295 50 46 chrX 44296398 44296984 -122353312 - L1ME2 LINE L1 -201 5963 5376 4 922 2117 253 32 11 chrX 44297142 44297674 -122352622 - Lx6 LINE L1 -1127 6333 5791 4 922 3203 269 101 29 chrX 44297693 44297868 -122352428 + Lx6 LINE L1 6318 6525 -935 4 922 3399 28 2 0 chrX 44297868 44298263 -122352033 + MTA_Mm LTR MaLR 1 396 0 4 922 3203 269 101 29 chrX 44298263 44299139 -122351157 + Lx6 LINE L1 6526 7445 -15 4 922 546 16 0 0 chrX 44299155 44299218 -122351078 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 4 922 201 270 117 39 chrX 44299807 44299884 -122350412 - MIR3 SINE MIR -16 192 110 4 922 2005 75 36 0 chrX 44300028 44300306 -122349990 - L1_Mus2 LINE L1 -1 6565 6278 4 922 298 247 76 19 chrX 44300607 44300764 -122349532 - L1MA7 LINE L1 -15 6276 6111 4 115 7297 72 16 4 chrX 44301861 44302840 -122347456 - L1_Mus3 LINE L1 -1 6637 5647 4 923 515 301 13 0 chrX 44302988 44303144 -122347152 - Lx5 LINE L1 -3 7047 6890 4 923 374 269 9 44 chrX 44303146 44303259 -122347037 - RMER17C LTR ERVK -299 111 3 4 923 1664 199 0 3 chrX 44303368 44303676 -122346620 + Lx2B LINE L1 6436 6742 -258 4 923 629 159 58 37 chrX 44303679 44303823 -122346473 - ORR1D1-int LTR MaLR -11 1498 1220 4 923 6196 207 28 9 chrX 44303840 44305360 -122344936 - Lx5 LINE L1 -7 7043 5483 4 923 4290 249 95 32 chrX 44305361 44306521 -122343775 - ORR1D1-int LTR MaLR -137 1233 1 4 923 1470 193 114 3 chrX 44306525 44306858 -122343438 - ORR1D1 LTR MaLR -4 370 1 4 923 183 345 58 35 chrX 44306944 44307031 -122343265 + L2c LINE L2 3263 3351 -36 4 923 326 325 152 33 chrX 44308556 44308766 -122341530 + L2 LINE L2 2645 2879 -540 4 923 771 325 37 74 chrX 44308770 44309069 -122341227 + B4A SINE B4 3 290 -2 4 923 270 136 0 0 chrX 44309079 44309123 -122341173 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 4 923 826 293 16 16 chrX 44310320 44310573 -122339723 + RMER5 LTR ERV1 274 526 -8 4 923 381 181 14 14 chrX 44311597 44311670 -122338626 - HAL1-3A_ME LINE L1 -831 2027 1955 4 923 183 42 0 0 chrX 44313556 44313580 -122336716 + (TTG)n Simple_repeat Simple_repeat 1 24 0 4 923 394 356 83 10 chrX 44313779 44313972 -122336324 + Charlie1a DNA MER1_type 8 214 -1241 4 923 228 271 0 0 chrX 44314465 44314513 -122335783 + MIR SINE MIR 183 230 -32 4 923 255 231 123 0 chrX 44314656 44314721 -122335575 + ID2 SINE ID 1 73 -10 4 923 482 240 25 0 chrX 44315029 44315150 -122335146 + L1ME3A LINE L1 6017 6140 -33 4 923 530 331 118 47 chrX 44316201 44316929 -122333367 + L1MB7 LINE L1 1 780 -5762 4 923 400 323 79 19 chrX 44316945 44317365 -122332931 + L1MB7 LINE L1 5353 5797 -847 4 923 21 82 0 0 chrX 44317798 44317847 -122332449 + AT_rich Low_complexity Low_complexity 1 49 0 4 923 1476 258 45 24 chrX 44317849 44318223 -122332073 - MTC LTR MaLR -39 382 1 4 923 6128 97 11 0 chrX 44318363 44319352 -122330944 + L1_Mus1 LINE L1 4948 5952 -615 4 923 3615 66 2 4 chrX 44319352 44319822 -122330474 + L1_Mus1 LINE L1 6098 6566 -1 4 923 22 0 0 0 chrX 44319845 44319867 -122330429 + AT_rich Low_complexity Low_complexity 1 22 0 4 923 598 292 94 13 chrX 44320325 44320634 -122329662 + L1MB7 LINE L1 6340 6673 -9 4 923 4657 143 24 21 chrX 44321471 44322272 -122328024 + Lx2B LINE L1 6192 6994 -6 4 923 220 303 104 13 chrX 44322283 44322360 -122327936 + B4A SINE B4 1 84 -208 4 923 260 53 26 0 chrX 44322362 44322400 -122327896 + (TGG)n Simple_repeat Simple_repeat 3 41 0 4 923 198 71 0 0 chrX 44322404 44322432 -122327864 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 923 524 307 11 73 chrX 44322433 44322612 -122327684 + B4A SINE B4 117 284 -8 4 923 645 173 0 0 chrX 44322635 44322762 -122327534 + GA-rich Low_complexity Low_complexity 2 128 0 4 923 309 51 0 0 chrX 44322783 44322822 -122327474 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 923 735 90 3 1 chrX 44322822 44322938 -122327358 - B1_Mus2 SINE Alu -9 140 24 4 923 1418 267 24 36 chrX 44323035 44323454 -122326842 + MTD LTR MaLR 4 417 -2 4 923 1092 238 187 0 chrX 44325164 44325517 -122324779 + MTD LTR MaLR 1 419 0 4 923 408 311 100 20 chrX 44325517 44325858 -122324438 + L1ME3A LINE L1 5464 5831 -342 4 923 286 256 26 66 chrX 44326173 44326276 -122324020 + MTEb LTR MaLR 170 271 -108 4 923 1493 247 123 16 chrX 44326304 44326589 -122323707 - MTD LTR MaLR -14 405 80 4 923 2280 142 49 12 chrX 44326589 44326995 -122323301 - MTC LTR MaLR 0 421 1 4 923 1493 247 123 16 chrX 44326995 44327075 -122323221 - MTD LTR MaLR -340 79 1 4 923 622 323 11 5 chrX 44327124 44327314 -122322982 - B3A SINE B2 -6 192 2 4 923 262 322 161 62 chrX 44328671 44328863 -122321433 - MER20 DNA MER1_type -5 214 4 4 923 363 78 0 0 chrX 44328987 44329038 -122321258 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 923 3313 15 0 0 chrX 44329038 44329429 -122320867 + MTA_Mm LTR MaLR 6 396 0 4 923 7503 23 36 0 chrX 44329429 44330357 -122319939 + MTA_Mm-int LTR MaLR 1 961 -137 4 923 281 310 28 74 chrX 44330564 44330672 -122319624 - PB1D10 SINE Alu -2 115 13 4 923 32884 40 0 0 chrX 44330672 44336038 -122314258 + L1Md_T LINE L1 127 5589 -297 4 923 8842 8 3 0 chrX 44336038 44337029 -122313267 + L1Md_T LINE L1 5590 6583 -2 4 923 1162 7 0 0 chrX 44337029 44337178 -122313118 + MTA_Mm-int LTR MaLR 950 1098 0 4 923 3424 30 0 0 chrX 44337178 44337574 -122312722 + MTA_Mm LTR MaLR 1 396 0 4 923 342 0 0 0 chrX 44337574 44337612 -122312684 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 923 245 328 43 51 chrX 44337797 44337935 -122312361 - MER5A DNA MER1_type -51 138 2 4 923 195 42 0 0 chrX 44338156 44338180 -122312116 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 923 366 23 0 0 chrX 44338182 44338225 -122312071 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 923 576 121 0 0 chrX 44338225 44338316 -122311980 + (GA)n Simple_repeat Simple_repeat 2 92 0 4 923 719 332 122 8 chrX 44338320 44338713 -122311583 - Lx7 LINE L1 -387 7309 6872 4 923 301 380 9 0 chrX 44338797 44338910 -122311386 + B1F1 SINE Alu 7 120 -29 4 923 812 39 10 0 chrX 44340081 44340185 -122310111 + (TTCTC)n Simple_repeat Simple_repeat 4 108 0 4 923 233 301 146 0 chrX 44341192 44341295 -122309001 + L2 LINE L2 2565 2682 -737 4 923 1011 113 7 0 chrX 44341478 44341620 -122308676 + B1_Mus1 SINE Alu 5 147 -1 4 923 226 47 22 44 chrX 44341625 44341670 -122308626 + (CAAAAA)n Simple_repeat Simple_repeat 4 47 0 4 923 333 0 0 0 chrX 44341728 44341765 -122308531 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 923 275 306 80 18 chrX 44341769 44341882 -122308414 + MER77 LTR ERVL 71 190 -417 4 923 232 250 109 62 chrX 44341977 44342041 -122308255 + ORR1E LTR MaLR 1 67 -292 4 923 2570 119 14 14 chrX 44342066 44342089 -122308207 - Lx3_Mus LINE L1 0 7009 6987 4 923 270 0 0 0 chrX 44342089 44342119 -122308177 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 4 923 2570 119 14 14 chrX 44342119 44342512 -122307784 - Lx3_Mus LINE L1 -23 6986 6593 4 923 464 346 81 33 chrX 44342785 44343057 -122307239 + MER77 LTR ERVL 307 591 -16 4 923 202 318 11 11 chrX 44343451 44343540 -122306756 + CT-rich Low_complexity Low_complexity 1 89 0 4 923 34652 64 7 5 chrX 44343626 44349648 -122300648 - L1Md_F2 LINE L1 0 6585 468 5 923 219 88 0 0 chrX 44351721 44351755 -122298541 + (CAGAGA)n Simple_repeat Simple_repeat 3 36 0 5 923 470 292 84 19 chrX 44352244 44352451 -122297845 - MIRc SINE MIR -51 217 3 5 923 25 31 0 0 chrX 44353595 44353627 -122296669 + AT_rich Low_complexity Low_complexity 1 32 0 5 923 305 402 33 16 chrX 44354230 44354412 -122295884 - MIRb SINE MIR -21 247 63 5 923 3230 230 97 7 chrX 44354950 44355493 -122294803 - Lx6 LINE L1 -3 7457 6896 5 923 420 20 0 0 chrX 44355493 44355542 -122294754 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 923 3230 230 97 7 chrX 44355542 44355751 -122294545 - Lx6 LINE L1 -565 6895 6639 5 923 289 300 112 21 chrX 44356477 44356620 -122293676 - MIR3 SINE MIR -15 193 38 5 923 342 0 0 0 chrX 44356868 44356906 -122293390 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 923 681 343 40 25 chrX 44356940 44357218 -122293078 - B4A SINE B4 -10 282 1 5 923 228 130 0 42 chrX 44357257 44357305 -122292991 + T-rich Low_complexity Low_complexity 5 50 0 5 923 564 42 0 0 chrX 44357306 44357377 -122292919 + (TAG)n Simple_repeat Simple_repeat 3 73 0 5 923 2409 276 68 22 chrX 44357395 44358655 -122291641 - Lx5 LINE L1 -27 7023 5677 5 923 5420 161 77 17 chrX 44358640 44358775 -122291521 + L1_Mur2 LINE L1 4518 4650 -1227 5 923 3897 54 36 2 chrX 44358775 44359276 -122291020 + L1_Mus2 LINE L1 6048 6565 -1 5 923 5420 161 77 17 chrX 44359276 44359383 -122290913 + L1_Mur2 LINE L1 4651 4792 -1085 5 923 1053 58 0 0 chrX 44359383 44359520 -122290776 + (CA)n Simple_repeat Simple_repeat 2 138 0 5 923 5420 161 77 17 chrX 44359520 44360359 -122289937 + L1_Mur2 LINE L1 4793 5665 -212 5 923 1022 90 13 34 chrX 44361035 44361184 -122289112 + B1_Mus1 SINE Alu 1 146 -2 5 923 762 271 41 6 chrX 44361569 44361740 -122288556 + B3 SINE B2 27 203 -13 5 923 421 322 13 26 chrX 44363989 44364145 -122286151 + MIR SINE MIR 108 261 -1 5 923 316 236 49 92 chrX 44364603 44364766 -122285530 + RMER10A LTR ERVL 259 414 -28 5 923 246 340 139 20 chrX 44366181 44366382 -122283914 - MIRb SINE MIR -42 226 2 5 923 193 399 27 20 chrX 44366464 44366610 -122283686 + MIR3 SINE MIR 38 184 -24 5 923 225 0 0 0 chrX 44368658 44368683 -122281613 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 923 230 193 18 0 chrX 44369042 44369099 -122281197 + (TA)n Simple_repeat Simple_repeat 1 58 0 5 923 213 39 0 0 chrX 44369544 44369570 -122280726 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 923 234 191 0 0 chrX 44369575 44369622 -122280674 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 923 256 193 0 17 chrX 44369630 44369688 -122280608 + Lx2 LINE L1 6934 6990 -7 5 923 28 0 0 0 chrX 44370857 44370885 -122279411 + AT_rich Low_complexity Low_complexity 1 28 0 5 923 357 305 21 78 chrX 44371022 44371164 -122279132 - MER20 DNA MER1_type -62 157 24 5 923 199 351 159 8 chrX 44371873 44372005 -122278291 - MIR3 SINE MIR -21 187 36 5 923 4501 234 10 12 chrX 44372725 44373660 -122276636 + Lx5 LINE L1 6118 7050 0 5 923 639 11 0 33 chrX 44373673 44373764 -122276532 + (TAAA)n Simple_repeat Simple_repeat 2 89 0 5 923 1311 175 9 5 chrX 44374055 44374279 -122276017 + URR1B DNA MER1_type 1 225 0 5 923 362 297 10 0 chrX 44374849 44374950 -122275346 + Lx8 LINE L1 6519 6620 -853 5 923 2516 281 61 20 chrX 44375412 44376214 -122274082 + Lx8 LINE L1 6637 7471 -2 5 923 456 208 0 0 chrX 44376297 44376374 -122273922 + Lx5 LINE L1 6860 6936 -114 5 923 256 326 20 72 chrX 44376786 44376938 -122273358 + MLT1A1 LTR MaLR 1 144 -264 5 923 279 267 93 0 chrX 44376942 44377028 -122273268 + MLT1A1 LTR MaLR 315 408 0 5 923 21 0 0 0 chrX 44377306 44377327 -122272969 + AT_rich Low_complexity Low_complexity 1 21 0 5 923 879 309 26 19 chrX 44377560 44377827 -122272469 + B4A SINE B4 1 269 -23 5 923 261 0 0 0 chrX 44377827 44377856 -122272440 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 923 441 0 0 0 chrX 44377856 44377904 -122272392 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 923 3314 220 75 44 chrX 44378790 44379560 -122270736 - Lx6 LINE L1 -1 7459 6666 5 923 215 272 114 19 chrX 44380312 44380417 -122269879 - MIR SINE MIR -89 173 59 5 923 194 0 39 0 chrX 44381280 44381306 -122268990 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 923 180 339 0 0 chrX 44382558 44382620 -122267676 - MIRb SINE MIR -18 250 189 5 923 21 36 0 0 chrX 44383276 44383304 -122266992 + AT_rich Low_complexity Low_complexity 1 28 0 5 923 559 349 20 20 chrX 44383517 44383753 -122266543 - B4A SINE B4 -54 238 3 5 923 211 325 114 38 chrX 44384135 44384266 -122266030 - L2c LINE L2 -3 3384 3244 5 923 330 87 0 0 chrX 44384266 44384312 -122265984 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 923 279 325 93 25 chrX 44384399 44384560 -122265736 - MIRb SINE MIR -18 250 79 5 923 373 138 31 0 chrX 44385333 44385398 -122264898 - HAL1-3A_ME LINE L1 -824 2034 1968 5 923 203 139 47 0 chrX 44385398 44385441 -122264855 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 5 923 396 82 0 0 chrX 44385446 44385507 -122264789 + (TC)n Simple_repeat Simple_repeat 2 62 0 5 923 358 343 59 41 chrX 44385661 44385880 -122264416 - MIRc SINE MIR 0 268 46 5 923 184 356 49 10 chrX 44386249 44386351 -122263945 + MIRc SINE MIR 9 114 -154 5 923 226 324 154 27 chrX 44386894 44387043 -122263253 + MIRc SINE MIR 50 217 -51 5 923 3143 197 58 69 chrX 44387260 44388145 -122262151 - L1_Rod LINE L1 -200 5647 4773 5 923 182 150 0 24 chrX 44388202 44388243 -122262053 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 923 423 301 0 0 chrX 44389549 44389652 -122260644 - ORR1D1 LTR MaLR 0 374 272 5 923 2166 126 9 0 chrX 44389656 44389974 -122260322 - ORR1A4 LTR MaLR -8 321 1 5 923 967 222 61 49 chrX 44389983 44390229 -122260067 - ORR1D1 LTR MaLR -120 254 6 5 923 21 57 0 0 chrX 44390808 44390843 -122259453 + AT_rich Low_complexity Low_complexity 1 35 0 5 923 1453 264 95 104 chrX 44390965 44391107 -122259189 + Lx6 LINE L1 6795 6937 -523 5 923 593 77 19 19 chrX 44391107 44391213 -122259083 + L1_Mus3 LINE L1 6524 6629 -9 5 923 1453 264 95 104 chrX 44391213 44391234 -122259062 + Lx6 LINE L1 6938 6938 -522 5 923 2288 185 102 72 chrX 44391234 44391904 -122258392 + RMER6C LTR ERVK 1 690 0 5 923 1453 264 95 104 chrX 44391904 44392217 -122258079 + Lx6 LINE L1 6938 7255 -205 5 923 722 42 0 11 chrX 44392217 44392312 -122257984 + (TTTTA)n Simple_repeat Simple_repeat 2 95 0 5 923 1453 264 95 104 chrX 44392312 44392505 -122257791 + Lx6 LINE L1 7256 7460 0 5 923 4818 100 1 17 chrX 44393220 44393919 -122256377 - L1_Mus4 LINE L1 0 6636 5949 5 923 6284 80 53 6 chrX 44394997 44395881 -122254415 - L1_Mus3 LINE L1 -6 6632 5707 5 923 4343 144 12 0 chrX 44395873 44396552 -122253744 + L1_Mus3 LINE L1 5040 5726 -157 5 923 459 194 18 36 chrX 44397084 44397196 -122253100 - L1MB7 LINE L1 -2 6182 6073 5 923 195 69 0 0 chrX 44399361 44399390 -122250906 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 5 923 15340 150 77 36 chrX 44399394 44404663 -122245633 - L1_Mus2 LINE L1 0 6566 514 5 923 236 53 26 0 chrX 44404663 44404701 -122245595 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 923 2173 255 55 117 chrX 44404701 44405003 -122245293 - L1_Mus2 LINE L1 -6105 533 238 5 923 262 42 20 41 chrX 44405008 44405057 -122245239 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 5 923 1300 51 0 17 chrX 44405314 44405494 -122244802 + L1Md_F3 LINE L1 6408 6584 0 5 923 834 282 38 31 chrX 44405831 44406125 -122244171 + MTD LTR MaLR 1 283 -124 5 923 1328 181 57 33 chrX 44406228 44406559 -122243737 - Lx7 LINE L1 0 7696 7358 5 923 24 77 0 0 chrX 44406569 44406621 -122243675 + AT_rich Low_complexity Low_complexity 1 52 0 5 923 2377 210 54 21 chrX 44406638 44407159 -122243137 - Lx7 LINE L1 -354 7342 6805 5 923 1598 175 45 129 chrX 44407156 44407405 -122242891 - L1_Mur3 LINE L1 -7 5873 5615 5 923 360 0 0 0 chrX 44407405 44407445 -122242851 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 923 1598 175 45 129 chrX 44407445 44407621 -122242675 - L1_Mur3 LINE L1 -266 5614 5484 5 923 548 380 0 12 chrX 44408109 44408255 -122242041 + RSINE1 SINE B4 3 148 -17 5 923 327 85 0 0 chrX 44408255 44408302 -122241994 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 923 548 380 0 12 chrX 44408302 44408320 -122241976 + RSINE1 SINE B4 149 165 0 5 923 768 334 68 36 chrX 44408742 44409127 -122241169 - MLT1C LTR MaLR 0 467 71 5 923 3064 149 94 2 chrX 44409272 44410011 -122240285 - Lx5 LINE L1 -972 6078 5276 5 923 953 124 7 0 chrX 44410011 44410164 -122240132 - Lx5 LINE L1 -962 4915 4762 5 923 4640 196 79 3 chrX 44410159 44411054 -122239242 + Lx5 LINE L1 6084 7046 -4 5 923 7490 89 23 1 chrX 44411065 44412386 -122237910 + L1_Mus3 LINE L1 5285 6632 -6 5 923 22 0 0 0 chrX 44412393 44412415 -122237881 + AT_rich Low_complexity Low_complexity 1 22 0 5 923 201 39 0 0 chrX 44412549 44412575 -122237721 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 5 923 515 67 0 26 chrX 44413121 44413198 -122237098 + (GAGAA)n Simple_repeat Simple_repeat 4 78 0 5 923 531 0 0 0 chrX 44413909 44413968 -122236328 + (GA)n Simple_repeat Simple_repeat 2 60 0 5 923 1035 35 21 0 chrX 44414764 44414906 -122235390 - L1Md_F2 LINE L1 0 6582 6438 5 923 960 316 37 47 chrX 44415422 44415850 -122234446 - MER90 LTR ERV1 -145 430 7 5 923 485 210 16 31 chrX 44416967 44417095 -122233201 - Lx4B LINE L1 0 7058 6933 5 923 2914 46 52 0 chrX 44417098 44417467 -122232829 - RLTR10 LTR ERVK -2 388 1 5 923 7706 38 1 2 chrX 44417467 44418381 -122231915 - RLTR10-int LTR ERVK -1 1986 1074 5 923 2678 60 3 0 chrX 44418387 44418721 -122231575 - RLTR10-int LTR ERVK -1612 375 41 5 923 2694 45 94 19 chrX 44418731 44419094 -122231202 - RLTR10 LTR ERVK 0 390 1 5 923 396 200 0 0 chrX 44419094 44419164 -122231132 - Lx4B LINE L1 -120 6938 6869 5 923 2107 169 22 7 chrX 44419147 44419557 -122230739 + L1_Mur2 LINE L1 4826 5230 -617 5 923 408 287 167 17 chrX 44419916 44420210 -122230086 + L1MEd LINE L1 881 1218 -4901 5 923 202 26 24 73 chrX 44420240 44420281 -122230015 + (CAAAA)n Simple_repeat Simple_repeat 5 43 0 5 923 321 260 119 24 chrX 44420526 44420652 -122229644 + B1F SINE Alu 5 142 -7 5 923 532 320 44 24 chrX 44421025 44421230 -122229066 + RMER15 LTR ERVL 353 561 -14 5 923 410 330 38 6 chrX 44421499 44421682 -122228614 + L1M3b LINE L1 258 446 -5835 5 923 340 262 135 0 chrX 44422162 44422288 -122228008 + L1M3b LINE L1 5103 5245 -1099 5 923 5026 108 9 0 chrX 44422309 44423046 -122227250 - L1_Mus3 LINE L1 0 6638 5895 5 923 4070 135 2 0 chrX 44423046 44423667 -122226629 + L1_Mus3 LINE L1 5262 5883 0 5 923 318 106 0 0 chrX 44423774 44423821 -122226475 + (A)n Simple_repeat Simple_repeat 1 47 0 5 923 365 257 32 71 chrX 44424174 44424329 -122225967 + L1MEe LINE L1 743 891 -3963 5 923 549 324 0 42 chrX 44425141 44425331 -122224965 - RMER30 DNA MER1_type -1 201 20 6 923 363 348 99 9 chrX 44425354 44425577 -122224719 + Charlie12 DNA MER1_type 402 644 -2229 6 923 421 241 85 80 chrX 44425565 44425741 -122224555 - B2_Mm2 SINE B2 -2 193 17 6 923 619 202 121 0 chrX 44425846 44425970 -122224326 + URR1B DNA MER1_type 1 139 -86 6 923 1144 41 0 0 chrX 44425983 44426128 -122224168 - L1Md_F2 LINE L1 -11 6571 6427 6 923 1391 217 89 41 chrX 44426210 44426671 -122223625 + Charlie12 DNA MER1_type 625 1107 -1766 6 923 241 50 0 0 chrX 44426698 44426738 -122223558 + Lx LINE L1 6613 6652 -2 6 923 4470 262 97 43 chrX 44426797 44428462 -122221834 + Charlie12 DNA MER1_type 1119 2873 0 6 923 1724 125 0 4 chrX 44429088 44429354 -122220942 + L1_Mus4 LINE L1 6365 6629 -7 6 923 2106 149 7 44 chrX 44429700 44430107 -122220189 - Lx2 LINE L1 0 6997 6606 6 923 46 33 0 0 chrX 44430493 44430553 -122219743 + AT_rich Low_complexity Low_complexity 1 60 0 6 923 566 299 62 11 chrX 44430560 44430739 -122219557 - B3A SINE B2 -10 188 1 6 923 2657 179 13 0 chrX 44430974 44431444 -122218852 - L1_Mm LINE L1 -285 5598 5123 6 115 9559 90 39 1 chrX 44431447 44433714 -122216582 - L1Md_F2 LINE L1 0 6582 4238 6 924 6057 105 107 9 chrX 44433722 44434598 -122215698 + Lx LINE L1 5589 6548 -106 6 924 189 0 0 0 chrX 44434598 44434619 -122215677 + (GGA)n Simple_repeat Simple_repeat 3 23 0 6 924 6057 105 107 9 chrX 44434619 44434706 -122215590 + Lx LINE L1 6549 6645 -9 6 924 852 10 0 0 chrX 44434707 44434804 -122215492 + (GAA)n Simple_repeat Simple_repeat 3 99 0 6 924 249 57 0 0 chrX 44434863 44434898 -122215398 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 924 324 0 0 0 chrX 44434905 44434941 -122215355 + (TA)n Simple_repeat Simple_repeat 1 36 0 6 924 23 33 0 0 chrX 44434944 44434974 -122215322 + AT_rich Low_complexity Low_complexity 1 30 0 6 924 622 151 161 12 chrX 44435044 44435212 -122215084 - Lx9 LINE L1 -8 7636 7444 6 924 5145 148 37 7 chrX 44435266 44436131 -122214165 - Lx2 LINE L1 -2 6995 6105 6 924 598 243 40 36 chrX 44436337 44436559 -122213737 - Lx9 LINE L1 -176 7468 7246 6 924 347 370 69 21 chrX 44437012 44437346 -122212950 - MLT-int LTR MaLR -1125 610 261 6 924 13775 150 8 60 chrX 44437417 44438980 -122211316 + L1Md_F LINE L1 459 1958 -1859 6 924 4083 163 30 16 chrX 44438980 44439778 -122210518 - RMER17D2 LTR ERVK 0 809 1 6 924 13775 120 4 8 chrX 44439778 44441169 -122209127 + L1Md_F LINE L1 1959 3338 -479 6 924 5755 143 22 9 chrX 44441140 44442367 -122207929 + L1_Mus3 LINE L1 5381 6630 -8 6 924 21 0 0 0 chrX 44442369 44442390 -122207906 + AT_rich Low_complexity Low_complexity 1 21 0 6 924 704 326 142 18 chrX 44443191 44443528 -122206768 - MTEa LTR MaLR 0 379 1 6 924 188 355 43 43 chrX 44444025 44444187 -122206109 + MIRc SINE MIR 103 264 -4 6 924 1963 67 7 21 chrX 44445406 44445695 -122204601 + L1Md_F2 LINE L1 6298 6582 0 6 924 27 0 0 0 chrX 44446013 44446040 -122204256 + AT_rich Low_complexity Low_complexity 1 27 0 6 924 344 314 20 41 chrX 44446366 44446612 -122203684 + L1MC3 LINE L1 7535 7775 -10 6 924 733 244 56 5 chrX 44447133 44447331 -122202965 + Lx5 LINE L1 6840 7047 -3 6 924 490 294 144 34 chrX 44447366 44447811 -122202485 + L1MEg LINE L1 1619 2146 -3862 6 924 1708 302 72 26 chrX 44447911 44448526 -122201770 + Lx8 LINE L1 6684 7326 -147 6 924 22 88 0 0 chrX 44448736 44448793 -122201503 + AT_rich Low_complexity Low_complexity 1 57 0 6 924 826 213 147 13 chrX 44449215 44449453 -122200843 + MTC LTR MaLR 6 275 -146 6 924 558 107 0 0 chrX 44449409 44449493 -122200803 - 4.5SRNA scRNA scRNA -5 89 6 6 924 971 146 7 0 chrX 44449809 44449953 -122200343 + MTC LTR MaLR 222 366 -55 6 924 1245 168 0 9 chrX 44449962 44450172 -122200124 + MTC LTR MaLR 213 420 -1 6 924 520 302 49 43 chrX 44451583 44451932 -122198364 + L1MC4 LINE L1 7685 8035 -7 6 924 230 364 0 13 chrX 44452019 44452097 -122198199 + MIRb SINE MIR 81 157 -111 6 924 1899 310 30 11 chrX 44452290 44452857 -122197439 - Lx5 LINE L1 -18 7032 6455 6 924 5472 93 22 1 chrX 44453361 44454132 -122196164 - L1Md_F2 LINE L1 -13 6569 5783 6 924 32462 91 8 9 chrX 44454141 44460323 -122189973 - L1Md_F3 LINE L1 -1 6583 409 6 924 3067 326 53 22 chrX 44460334 44461582 -122188714 - Lx8 LINE L1 -131 7342 6057 6 924 247 347 0 39 chrX 44462214 44462292 -122188004 + ID_B1 SINE B4 127 201 -23 6 924 191 167 24 0 chrX 44462309 44462351 -122187945 + GA-rich Low_complexity Low_complexity 2 44 0 6 924 1791 142 0 11 chrX 44462569 44462846 -122187450 - Lx2 LINE L1 -354 6643 6370 6 924 1471 182 0 0 chrX 44462846 44463110 -122187186 + Lx2 LINE L1 6733 6996 -1 6 924 11589 72 5 0 chrX 44463180 44464702 -122185594 + L1Md_F2 LINE L1 4058 5586 -297 6 924 7309 72 19 1 chrX 44464703 44465670 -122184626 + L1Md_F2 LINE L1 5588 6571 -11 6 924 288 351 29 63 chrX 44466001 44466176 -122184120 - B4A SINE B4 -49 243 1 6 924 245 351 82 25 chrX 44466818 44466976 -122183320 - MIRb SINE MIR -64 204 38 6 924 6645 7 0 0 chrX 44467099 44467845 -122182451 + L1Md_A LINE L1 4841 5586 -297 6 924 9046 1 0 0 chrX 44467845 44468841 -122181455 + L1Md_A LINE L1 5587 6582 0 6 924 222 360 63 95 chrX 44470284 44470682 -122179614 - L2a LINE L2 -12 3414 3013 6 924 594 353 88 34 chrX 44470986 44471314 -122178982 - MLT1A0 LTR MaLR -19 346 1 6 924 963 322 8 18 chrX 44473496 44473951 -122176345 - L1MA4 LINE L1 -392 5908 5441 6 924 2793 168 19 0 chrX 44473975 44474462 -122175834 - Lx4A LINE L1 -1 7057 6562 6 924 1747 155 75 91 chrX 44474462 44474672 -122175624 + Lx4A LINE L1 5785 6006 -1052 6 924 1140 60 6 35 chrX 44474672 44474844 -122175452 + L1_Mus2 LINE L1 6400 6566 0 6 924 1747 155 75 91 chrX 44474844 44475060 -122175236 + Lx4A LINE L1 6007 6204 -854 6 924 1016 238 138 70 chrX 44475060 44475146 -122175150 - RMER2 LTR ERV1 0 567 486 6 924 4684 22 33 0 chrX 44475146 44475697 -122174599 - L1Md_A LINE L1 -1 6581 6013 6 924 1016 238 115 58 chrX 44475697 44476108 -122174188 - RMER2 LTR ERV1 -82 485 1 6 924 2112 127 63 25 chrX 44476108 44476472 -122173824 + Lx4A LINE L1 6201 6578 -480 6 924 505 297 47 5 chrX 44476466 44476679 -122173617 - L1_Mur3 LINE L1 -473 5407 5186 6 924 470 322 58 6 chrX 44476789 44476961 -122173335 - MER63A DNA AcHobo -11 199 19 6 924 643 247 37 32 chrX 44477051 44477239 -122173057 - B3A SINE B2 -7 191 3 6 924 214 188 0 20 chrX 44478752 44478801 -122171495 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 924 474 103 0 0 chrX 44478954 44479022 -122171274 + L1_Mur3 LINE L1 33 100 -7612 6 924 551 254 35 0 chrX 44479090 44479263 -122171033 + L1_Mur3 LINE L1 94 272 -7440 6 924 1729 256 24 17 chrX 44479256 44479310 -122170986 + Lx6 LINE L1 6845 6901 -559 6 924 492 48 0 0 chrX 44479310 44479373 -122170923 + (CAGA)n Simple_repeat Simple_repeat 2 64 0 6 924 1729 256 24 17 chrX 44479373 44479727 -122170569 + Lx6 LINE L1 6902 7256 -204 6 924 640 301 0 13 chrX 44479758 44479913 -122170383 - MTEa LTR MaLR -209 170 18 6 924 453 323 88 53 chrX 44480060 44480344 -122169952 - L1M5 LINE L1 -688 5552 5259 6 924 746 262 5 16 chrX 44480497 44480687 -122169609 + ORR1D1 LTR MaLR 2 189 -185 6 924 765 82 0 0 chrX 44480687 44480797 -122169499 + (TC)n Simple_repeat Simple_repeat 1 110 0 6 924 740 235 32 60 chrX 44480803 44481020 -122169276 + ORR1D1 LTR MaLR 158 368 -6 6 924 198 0 0 0 chrX 44481826 44481848 -122168448 + (TCC)n Simple_repeat Simple_repeat 2 23 0 6 924 352 297 68 0 chrX 44482191 44482309 -122167987 + MLT1J LTR MaLR 1 126 -386 6 924 895 289 144 6 chrX 44482328 44482655 -122167641 + RCHARR1 DNA MER1_type 37 408 -566 6 924 405 0 0 0 chrX 44482675 44482720 -122167576 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 924 294 252 241 9 chrX 44482740 44482848 -122167448 - B3A SINE B2 -61 137 5 6 924 559 201 26 13 chrX 44482850 44483001 -122167295 + RCHARR1 DNA MER1_type 390 542 -432 6 924 244 237 86 0 chrX 44483004 44483097 -122167199 + L1MA8 LINE L1 6185 6285 -6 6 924 304 298 18 46 chrX 44483097 44483206 -122167090 - L1ME3A LINE L1 -23 6150 6045 6 924 524 340 43 0 chrX 44483218 44483380 -122166916 + B3A SINE B2 8 176 -22 6 924 308 148 16 0 chrX 44483529 44483590 -122166706 + (TA)n Simple_repeat Simple_repeat 2 63 0 6 924 303 234 189 0 chrX 44483590 44483701 -122166595 - L1ME3A LINE L1 -252 5912 5781 6 924 340 363 93 8 chrX 44483746 44483982 -122166314 - L1ME3A LINE L1 -472 5701 5446 6 924 37911 31 0 0 chrX 44484068 44490252 -122160044 - L1Md_T LINE L1 0 6585 305 6 924 1129 226 90 23 chrX 44490252 44490597 -122159699 + RCHARR1 DNA MER1_type 528 895 -79 6 924 2843 234 38 13 chrX 44490684 44491479 -122158817 - Lx6 LINE L1 -999 6697 5606 6 924 213 437 7 7 chrX 44491961 44492097 -122158199 + L4 LINE RTE 1263 1398 -631 6 924 871 294 144 26 chrX 44492218 44492557 -122157739 + MTEa LTR MaLR 1 379 0 6 924 429 70 0 0 chrX 44493034 44493091 -122157205 + (TA)n Simple_repeat Simple_repeat 1 57 0 6 924 4096 139 44 85 chrX 44493207 44493975 -122156321 - RMER19A LTR ERVK 0 737 1 6 924 38 39 0 0 chrX 44494150 44494202 -122156094 + AT_rich Low_complexity Low_complexity 1 52 0 6 924 1084 102 0 0 chrX 44494202 44494349 -122155947 - B1_Mus2 SINE Alu 0 147 1 6 924 363 83 0 0 chrX 44494951 44494999 -122155297 - ORR1A4 LTR MaLR -8 321 274 6 924 1270 153 37 0 chrX 44495034 44495249 -122155047 - Lx2 LINE L1 0 6997 6775 6 924 2293 106 6 3 chrX 44495249 44495581 -122154715 - Lx2 LINE L1 -354 6643 6311 6 924 1284 204 117 80 chrX 44495582 44495934 -122154362 - ORR1B1 LTR MaLR -29 365 1 6 924 211 335 143 14 chrX 44496221 44496430 -122153866 + L2a LINE L2 3191 3426 0 6 924 420 357 125 30 chrX 44496444 44496779 -122153517 + L2 LINE L2 2606 2972 -447 6 924 628 217 200 5 chrX 44497040 44497225 -122153071 - URR1B DNA MER1_type 0 225 5 6 924 948 302 147 27 chrX 44497435 44497911 -122152385 - FordPrefect DNA Tip100 -41 1642 1110 6 924 1678 180 3 3 chrX 44497919 44498265 -122152031 + L1_Mur2 LINE L1 2274 2619 -3258 6 924 6937 131 18 15 chrX 44498268 44500000 -122150296 + L1VL4 LINE L1 218 1954 -1605 6 924 16495 157 17 41 chrX 44500000 44504456 -122145840 + L1_Mus4 LINE L1 2315 6636 0 1 924 7636 166 62 91 chrX 44504466 44504989 -122145307 + L1_Mur2 LINE L1 2613 3004 -2873 2 924 738 0 0 0 chrX 44504989 44505071 -122145225 + (GAAA)n Simple_repeat Simple_repeat 1 82 0 3 924 7636 166 62 91 chrX 44505071 44506631 -122143665 + L1_Mur2 LINE L1 3005 4623 -1254 2 924 373 19 18 18 chrX 44506631 44506686 -122143610 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 4 924 7636 166 62 91 chrX 44506686 44506763 -122143533 + L1_Mur2 LINE L1 4624 4712 -1165 2 924 4008 197 9 23 chrX 44506763 44507243 -122143053 + Lx5 LINE L1 6269 6732 -318 5 924 414 0 0 0 chrX 44507243 44507289 -122143007 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 924 4008 197 9 23 chrX 44507289 44507601 -122142695 + Lx5 LINE L1 6733 7049 -1 5 924 607 278 34 27 chrX 44507665 44507813 -122142483 - B1F SINE Alu 0 149 1 7 924 414 0 0 0 chrX 44507816 44507862 -122142434 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 8 924 511 238 0 74 chrX 44507862 44508025 -122142271 + Lx6 LINE L1 5793 5943 -1517 9 924 608 153 32 63 chrX 44508028 44508154 -122142142 + Lx6 LINE L1 6105 6226 -1234 9 924 624 394 80 24 chrX 44509144 44509521 -122140775 - FordPrefect DNA Tip100 -763 920 523 1 924 270 414 20 10 chrX 44509813 44509913 -122140383 - FordPrefect DNA Tip100 -1566 117 17 1 924 530 182 0 9 chrX 44511603 44511714 -122138582 + (TA)n Simple_repeat Simple_repeat 2 111 0 1 924 207 69 0 0 chrX 44511718 44511747 -122138549 + (TATAA)n Simple_repeat Simple_repeat 1 29 0 1 924 338 324 14 38 chrX 44513626 44513818 -122136478 - MIRc SINE MIR -43 225 42 1 924 222 371 40 81 chrX 44513896 44513991 -122136305 + L2a LINE L2 2972 3067 -320 1 924 1850 181 14 8 chrX 44513991 44514348 -122135948 - RLTR15 LTR ERVK 0 359 1 1 924 222 371 40 81 chrX 44514348 44514425 -122135871 + L2a LINE L2 3068 3137 -250 1 924 231 304 76 51 chrX 44514501 44514619 -122135677 + L2a LINE L2 3305 3425 -1 1 924 278 270 33 11 chrX 44515433 44515523 -122134773 - RLTR42-int LTR ERVK -116 5406 5315 1 924 185 323 0 31 chrX 44515706 44515770 -122134526 + L4 LINE RTE 1712 1773 -256 1 924 325 208 14 0 chrX 44517178 44517250 -122133046 + Lx9 LINE L1 7348 7420 -224 1 924 201 74 0 0 chrX 44517271 44517298 -122132998 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 1 924 383 179 48 8 chrX 44517298 44517422 -122132874 + Lx9 LINE L1 7515 7643 -1 1 924 226 311 0 0 chrX 44517588 44517649 -122132647 + SSU-rRNA_Hsa rRNA rRNA 724 784 -1085 2 924 4357 221 63 71 chrX 44517923 44519211 -122131085 + Lx9 LINE L1 6359 7636 -8 2 924 21 0 0 0 chrX 44519219 44519240 -122131056 + AT_rich Low_complexity Low_complexity 1 21 0 2 924 252 345 40 15 chrX 44520930 44521130 -122129166 - RLTR42-int LTR ERVK -4730 792 588 2 924 182 167 100 57 chrX 44521353 44521423 -122128873 + L3 LINE CR1 2290 2362 -2127 2 924 1381 140 53 0 chrX 44521713 44521956 -122128340 + Lx2 LINE L1 6741 6996 -1 2 924 1520 151 62 4 chrX 44522151 44522411 -122127885 - Lx4A LINE L1 -19 7039 6765 2 924 944 295 76 31 chrX 44522548 44522996 -122127300 - Lx8 LINE L1 -52 7421 6954 2 924 2981 82 2 2 chrX 44523089 44523493 -122126803 - L1Md_F2 LINE L1 0 6582 6179 2 924 455 279 59 0 chrX 44523719 44523855 -122126441 - Lx8 LINE L1 -517 6956 6813 2 924 953 132 0 59 chrX 44524510 44524663 -122125633 - B1_Mur4 SINE Alu -6 144 1 2 924 26 74 0 0 chrX 44527426 44527480 -122122816 + AT_rich Low_complexity Low_complexity 1 54 0 3 924 2905 222 56 21 chrX 44528064 44528776 -122121520 - Lx4B LINE L1 -17 7041 6305 3 924 809 80 0 81 chrX 44528838 44528987 -122121309 - L1Md_F2 LINE L1 -1 6581 6445 3 924 1049 283 48 84 chrX 44529260 44529653 -122120643 - MTEa LTR MaLR 0 379 1 3 924 389 288 104 41 chrX 44529904 44530125 -122120171 - L2a LINE L2 0 3426 3192 3 924 199 190 17 17 chrX 44530279 44530338 -122119958 + CT-rich Low_complexity Low_complexity 4 62 0 3 924 248 93 0 23 chrX 44531590 44531634 -122118662 + Lx8 LINE L1 7429 7471 -2 3 924 721 162 0 0 chrX 44532148 44532265 -122118031 - ORR1C2 LTR MaLR -11 373 257 3 924 594 107 43 35 chrX 44532555 44532671 -122117625 - Lx LINE L1 -1 6653 6537 3 924 519 79 0 0 chrX 44532674 44532750 -122117546 - Lx LINE L1 -309 6345 6270 3 924 626 285 13 0 chrX 44532750 44532901 -122117395 + B4A SINE B4 63 215 -77 3 924 255 313 0 0 chrX 44532903 44532970 -122117326 + Lx8 LINE L1 7171 7237 -236 4 924 641 118 9 0 chrX 44532977 44533087 -122117209 + (TTCC)n Simple_repeat Simple_repeat 3 113 0 4 924 399 267 0 112 chrX 44533094 44533246 -122117050 - ID_B1 SINE B4 0 224 90 4 924 767 179 0 43 chrX 44533110 44533250 -122117046 - B1_Mur4 SINE Alu -11 139 6 4 924 276 261 34 0 chrX 44533267 44533355 -122116941 + Lx8 LINE L1 7231 7321 -152 4 924 3573 102 0 21 chrX 44533375 44533908 -122116388 + L1_Mus4 LINE L1 6113 6634 -2 4 924 396 360 61 18 chrX 44533935 44534099 -122116197 + B4A SINE B4 1 171 -121 4 924 630 26 0 0 chrX 44534112 44534188 -122116108 + (CA)n Simple_repeat Simple_repeat 2 77 0 4 924 1256 186 0 0 chrX 44535215 44535425 -122114871 + MTC LTR MaLR 1 210 -211 4 924 823 174 14 0 chrX 44535425 44535569 -122114727 + B1_Mus1 SINE Alu 3 148 0 4 924 1299 176 32 0 chrX 44535585 44535806 -122114490 + MTC LTR MaLR 194 421 0 4 924 349 351 58 54 chrX 44537198 44537562 -122112734 - MLT1A1 LTR MaLR 0 408 1 4 924 181 270 125 16 chrX 44538766 44538830 -122111466 + L2c LINE L2 3284 3354 -33 5 924 203 209 0 23 chrX 44538897 44538941 -122111355 + L2c LINE L2 3337 3379 -8 5 924 417 333 71 42 chrX 44539040 44539350 -122110946 - MER46C DNA MER2_type -19 319 1 5 924 596 145 8 16 chrX 44539667 44539793 -122110503 - Lx9 LINE L1 -1 7643 7519 5 924 432 55 0 0 chrX 44539795 44539850 -122110446 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 924 938 120 38 6 chrX 44539854 44540013 -122110283 - Lx9 LINE L1 -179 7465 7302 5 924 271 287 48 54 chrX 44542198 44542353 -122107943 + L2a LINE L2 3211 3422 -4 5 924 1469 42 10 5 chrX 44543499 44543692 -122106604 + L1Md_F2 LINE L1 6377 6570 -12 5 924 216 370 227 43 chrX 44544169 44544520 -122105776 - L2 LINE L2 -694 2725 2311 5 924 3407 90 17 2 chrX 44544520 44544988 -122105308 + MT2C_Mm LTR ERVL 1 475 0 5 924 190 360 32 63 chrX 44544988 44545030 -122105266 - L2 LINE L2 -1109 2310 2269 5 924 218 435 19 0 chrX 44545417 44545578 -122104718 - L2 LINE L2 -1312 2107 1944 5 924 393 58 0 0 chrX 44545984 44546036 -122104260 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 924 369 0 0 0 chrX 44546320 44546361 -122103935 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 5 924 1093 59 0 0 chrX 44546613 44546749 -122103547 - B2_Mm2 SINE B2 -34 161 26 6 924 1601 68 22 13 chrX 44546749 44546974 -122103322 + L1_Mus1 LINE L1 6340 6566 -1 6 924 325 224 17 70 chrX 44547057 44547127 -122103169 - ORR1E-int LTR MaLR -15 1355 1288 6 924 3503 70 0 0 chrX 44547127 44547569 -122102727 - L1_Mus1 LINE L1 0 6567 6126 6 924 325 224 17 70 chrX 44547569 44547613 -122102683 - ORR1E-int LTR MaLR -83 1287 1248 6 924 3384 330 51 42 chrX 44547613 44548913 -122101383 - ORR1E-int LTR MaLR -256 1324 13 6 924 968 310 48 42 chrX 44548926 44549280 -122101016 - ORR1E LTR MaLR 0 359 4 6 924 566 322 0 20 chrX 44549560 44549706 -122100590 + RSINE1 SINE B4 3 145 -20 6 924 296 274 52 26 chrX 44549692 44549717 -122100579 + RMER12 LTR ERVK 732 760 -562 6 924 382 88 29 0 chrX 44549717 44549785 -122100511 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 924 296 274 52 26 chrX 44549785 44549875 -122100421 + RMER12 LTR ERVK 761 850 -472 6 924 228 379 15 46 chrX 44549900 44550030 -122100266 - MIRb SINE MIR -108 160 35 6 924 4796 109 25 24 chrX 44550363 44551107 -122099189 + Lx LINE L1 5908 6652 -2 6 924 8237 52 1 7 chrX 44551224 44553024 -122097272 - L1Md_F3 LINE L1 0 6584 4797 6 924 7199 117 8 9 chrX 44553017 44554988 -122095308 - L1_Mus4 LINE L1 -25 6611 4639 7 924 325 344 170 20 chrX 44555192 44555687 -122094609 - L2 LINE L2 -535 2884 2316 7 924 919 203 10 24 chrX 44558345 44558552 -122091744 + Lx2 LINE L1 6791 6994 -3 7 924 29 47 0 0 chrX 44558552 44558595 -122091701 + AT_rich Low_complexity Low_complexity 1 43 0 7 924 3448 239 94 65 chrX 44558902 44560056 -122090240 - Lx7 LINE L1 -2 7694 6508 7 924 412 314 108 90 chrX 44560101 44560489 -122089807 - RMER10A LTR ERVL -19 423 29 7 924 265 318 26 43 chrX 44560536 44560651 -122089645 + ORSL DNA Tip100 158 270 -5 7 924 4434 212 44 37 chrX 44560722 44561271 -122089025 - Lx5 LINE L1 -51 6999 6451 7 924 2577 114 19 17 chrX 44561271 44561681 -122088615 + L1_Mus4 LINE L1 6226 6636 0 7 924 4434 212 44 37 chrX 44561681 44562112 -122088184 - Lx5 LINE L1 -600 6450 6012 7 924 495 403 63 17 chrX 44562114 44562414 -122087882 - LTR16A LTR ERVL -51 400 87 7 115 791 325 115 25 chrX 44564309 44564789 -122085507 - MT2A LTR ERVL -8 525 3 8 925 451 76 0 0 chrX 44564969 44565035 -122085261 + L1_Mus2 LINE L1 6487 6552 -14 8 925 324 0 0 0 chrX 44565040 44565076 -122085220 + (TAA)n Simple_repeat Simple_repeat 1 36 0 8 925 693 283 7 7 chrX 44565098 44565251 -122085045 + RSINE1 SINE B4 12 164 -1 8 925 25 31 0 0 chrX 44565862 44565894 -122084402 + AT_rich Low_complexity Low_complexity 1 32 0 8 925 299 298 126 6 chrX 44566550 44566709 -122083587 + RMER4B LTR ERVK 8 185 -400 8 925 792 0 0 0 chrX 44567973 44568061 -122082235 + (TTC)n Simple_repeat Simple_repeat 3 90 0 8 925 514 339 105 23 chrX 44568061 44568366 -122081930 + Lx8 LINE L1 6927 7256 -217 8 925 237 290 0 16 chrX 44568377 44568440 -122081856 + RMER15 LTR ERVL 409 470 -105 8 925 4607 164 43 65 chrX 44568503 44569425 -122080871 - RMER19B LTR ERVK 0 902 1 8 925 457 355 14 34 chrX 44569688 44569834 -122080462 + B1F SINE Alu 1 143 -6 9 925 1072 279 36 18 chrX 44569836 44570220 -122080076 - L1_Mur3 LINE L1 -758 5122 4732 9 925 682 116 0 15 chrX 44570221 44570352 -122079944 + (TA)n Simple_repeat Simple_repeat 1 129 0 9 925 8171 49 1 5 chrX 44570427 44571518 -122078778 - L1Md_F2 LINE L1 -2 6580 5494 9 925 1397 246 19 11 chrX 44571517 44571882 -122078414 - L1_Mur3 LINE L1 -1139 4741 4374 9 925 3406 248 9 199 chrX 44571893 44573486 -122076810 - RMER1C Other Other -4 1338 48 9 925 585 219 35 0 chrX 44573677 44573791 -122076505 - RMER1B Other Other -361 705 588 9 925 842 247 60 8 chrX 44573843 44574108 -122076188 - L1_Mur3 LINE L1 -1514 4366 4088 9 925 1421 312 65 8 chrX 44574128 44574638 -122075658 + Lx8 LINE L1 6703 7241 -232 9 925 3553 94 0 0 chrX 44574644 44575134 -122075162 - L1_Mm LINE L1 -2267 3616 3127 9 925 6666 60 2 0 chrX 44575131 44575980 -122074316 + L1Md_F2 LINE L1 4736 5586 -297 9 925 7873 58 0 7 chrX 44575981 44576983 -122073313 + L1Md_F2 LINE L1 5588 6582 0 9 925 310 276 177 36 chrX 44577002 44577194 -122073102 + Lx8 LINE L1 7255 7473 0 9 925 872 104 8 0 chrX 44577195 44577329 -122072967 + (GGAA)n Simple_repeat Simple_repeat 2 136 0 9 925 251 261 56 11 chrX 44577341 44577430 -122072866 + MER103 DNA DNA 56 148 -18 1 925 342 356 20 25 chrX 44577608 44577807 -122072489 + L2a LINE L2 3217 3414 -12 1 925 470 294 23 23 chrX 44578858 44578987 -122071309 + B1F SINE Alu 1 129 -20 1 925 382 340 0 34 chrX 44578987 44579003 -122071293 + ID_B1 SINE B4 82 221 -3 1 925 3834 220 83 8 chrX 44579298 44580260 -122070036 - Lx2B LINE L1 0 7000 5967 1 925 5526 135 22 1 chrX 44580254 44581201 -122069095 + Lx3C LINE L1 4978 5943 -1033 1 925 232 303 200 21 chrX 44581849 44581994 -122068302 + L1M5 LINE L1 2360 2530 -3685 1 925 539 286 83 18 chrX 44582718 44582935 -122067361 + L1M5 LINE L1 5425 5655 -537 1 925 23 0 0 0 chrX 44583048 44583071 -122067225 + AT_rich Low_complexity Low_complexity 1 23 0 1 925 468 328 0 8 chrX 44584225 44584354 -122065942 + ID_B1 SINE B4 88 215 -9 1 925 873 111 19 7 chrX 44584468 44584622 -122065674 + L1_Mus3 LINE L1 6480 6635 -3 1 925 8297 39 1 4 chrX 44584975 44586168 -122064128 - L1Md_F2 LINE L1 0 6582 5394 1 925 4748 72 5 5 chrX 44586168 44586785 -122063511 - L1Md_F2 LINE L1 -188 6394 5778 1 925 183 114 0 0 chrX 44587064 44587099 -122063197 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 925 217 387 48 0 chrX 44587297 44587421 -122062875 + L2c LINE L2 3247 3376 -11 1 925 1069 137 0 0 chrX 44587573 44587734 -122062562 - B2_Mm2 SINE B2 -34 161 1 1 925 887 255 103 0 chrX 44589118 44589361 -122060935 - MLT1A0 LTR MaLR -18 347 80 1 925 184 260 80 0 chrX 44590445 44590495 -122059801 - L2 LINE L2 -604 2815 2762 1 925 424 16 31 31 chrX 44590998 44591063 -122059233 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 1 925 452 280 84 23 chrX 44591157 44591331 -122058965 - B4A SINE B4 -20 272 84 1 925 796 267 23 0 chrX 44592233 44592405 -122057891 + B3 SINE B2 1 176 -40 1 925 1854 211 55 45 chrX 44592399 44592931 -122057365 - RCHARR1 DNA MER1_type -66 908 372 1 925 7033 72 2 8 chrX 44592945 44593879 -122056417 - L1Md_F2 LINE L1 -12 6570 5642 1 925 34162 78 6 24 chrX 44594363 44600457 -122049839 - L1Md_F2 LINE L1 0 6582 630 1 925 962 311 42 39 chrX 44600468 44600826 -122049470 - RCHARR1 DNA MER1_type -612 362 4 1 925 189 147 0 0 chrX 44601890 44601924 -122048372 + (T)n Simple_repeat Simple_repeat 1 34 0 1 925 6767 99 54 12 chrX 44602089 44603112 -122047184 - Lx LINE L1 0 6654 5589 1 925 6730 165 10 107 chrX 44603112 44603484 -122046812 + L1_Mur1 LINE L1 4233 4595 -1291 1 925 3874 85 0 36 chrX 44603484 44604032 -122046264 - L1_Mus2 LINE L1 -1 6565 6038 1 925 6730 165 10 107 chrX 44604032 44605190 -122045106 + L1_Mur1 LINE L1 4596 5615 -271 1 925 1305 52 6 0 chrX 44606867 44607040 -122043256 + L1Md_F3 LINE L1 6410 6583 -1 1 925 31 0 0 0 chrX 44607040 44607071 -122043225 + AT_rich Low_complexity Low_complexity 1 31 0 1 925 229 390 14 14 chrX 44607614 44607762 -122042534 - MIRc SINE MIR -100 168 21 1 925 220 261 74 32 chrX 44607807 44607902 -122042394 - MIR SINE MIR -6 256 158 1 925 282 305 0 23 chrX 44610458 44610527 -122039769 + polypyrimidine Low_complexity Low_complexity 61 129 0 1 925 297 0 0 0 chrX 44610527 44610560 -122039736 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 925 282 305 0 23 chrX 44610560 44610621 -122039675 + polypyrimidine Low_complexity Low_complexity 3 60 0 1 925 309 255 84 11 chrX 44612449 44612544 -122037752 + B1F2 SINE Alu 41 142 -7 1 925 202 289 107 12 chrX 44613580 44613664 -122036632 + MIR SINE MIR 42 133 -75 1 925 552 287 76 15 chrX 44613718 44613916 -122036380 - MIRb SINE MIR -7 261 52 1 925 288 258 0 0 chrX 44613941 44614003 -122036293 + MIR3 SINE MIR 144 205 -3 1 925 441 282 69 25 chrX 44614197 44614357 -122035939 + B4A SINE B4 1 167 -125 1 925 288 0 0 0 chrX 44616747 44616779 -122033517 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 925 263 336 59 17 chrX 44617939 44618057 -122032239 - L2 LINE L2 -936 2483 2361 1 925 183 80 0 0 chrX 44618225 44618250 -122032046 + (A)n Simple_repeat Simple_repeat 1 25 0 1 925 2504 241 0 43 chrX 44618663 44619244 -122031052 - Lx5 LINE L1 -3 7047 6492 1 925 298 222 0 16 chrX 44619648 44619712 -122030584 - MTC LTR MaLR 0 421 359 1 925 13884 73 5 39 chrX 44619712 44621708 -122028588 + L1Md_F2 LINE L1 3658 5585 -298 1 925 7297 77 9 10 chrX 44621712 44622697 -122027599 + L1Md_F2 LINE L1 5587 6570 -12 1 925 1139 230 117 83 chrX 44622697 44623048 -122027248 - MTC LTR MaLR -46 375 13 1 925 459 0 0 0 chrX 44623139 44623190 -122027106 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 925 303 374 54 10 chrX 44623621 44623826 -122026470 - L2c LINE L2 -47 3340 3127 1 925 1467 104 30 17 chrX 44623845 44624080 -122026216 + Lx2 LINE L1 6718 6955 -42 1 925 540 0 0 0 chrX 44624088 44624148 -122026148 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 1 925 300 371 42 21 chrX 44624174 44624364 -122025932 - L2c LINE L2 -457 2962 2769 1 925 337 258 47 122 chrX 44624419 44624591 -122025705 + MLT1A0 LTR MaLR 1 159 -206 1 925 299 350 41 35 chrX 44625374 44625519 -122024777 + RSINE1 SINE B4 4 149 -16 1 925 741 69 0 0 chrX 44625582 44625683 -122024613 + B2_Mm2 SINE B2 2 102 -93 1 925 741 193 73 26 chrX 44625839 44626073 -122024223 - L1_Rod LINE L1 -3263 2584 2340 1 925 416 276 68 8 chrX 44626067 44626184 -122024112 + Lx9 LINE L1 7058 7181 -463 1 925 878 318 56 84 chrX 44626361 44626824 -122023472 + MTE-int LTR MaLR 467 916 -664 1 925 1867 245 10 15 chrX 44626997 44627407 -122022889 + MTE-int LTR MaLR 3 410 -1170 1 925 1519 276 79 40 chrX 44627469 44628380 -122021916 + L1MC LINE L1 3084 4030 -2116 1 925 635 273 69 29 chrX 44628506 44628812 -122021484 + L1MA9 LINE L1 5395 5712 -600 1 925 651 311 75 12 chrX 44628987 44629162 -122021134 + B4A SINE B4 1 182 -110 1 925 333 0 0 0 chrX 44629162 44629199 -122021097 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 925 651 311 75 12 chrX 44629199 44629277 -122021019 + B4A SINE B4 183 269 -23 1 925 1189 242 23 7 chrX 44629443 44629746 -122020550 + L1MA9 LINE L1 5994 6301 -11 1 925 486 252 45 66 chrX 44629780 44630016 -122020280 + L1ME2 LINE L1 5895 6129 -35 1 925 1285 349 102 50 chrX 44630146 44630331 -122019965 + Lx8 LINE L1 6057 6256 -1217 1 925 297 0 0 0 chrX 44630331 44630364 -122019932 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 925 1285 349 102 50 chrX 44630364 44631408 -122018888 + Lx8 LINE L1 6257 7350 -123 1 925 216 0 0 0 chrX 44632995 44633019 -122017277 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 1 925 369 243 34 59 chrX 44633998 44634116 -122016180 - MLT1A1 LTR MaLR -3 405 291 1 925 271 280 13 13 chrX 44634180 44634256 -122016040 + GA-rich Low_complexity Low_complexity 1 76 0 1 925 465 323 15 0 chrX 44634740 44634870 -122015426 - RSINE1 SINE B4 -32 133 2 1 925 7304 36 3 0 chrX 44635122 44635994 -122014302 + L1Md_A LINE L1 5707 6581 -1 1 925 506 93 123 6 chrX 44636457 44636620 -122013676 + RMER17A2 LTR ERVK 333 514 -392 1 925 423 0 0 0 chrX 44636936 44636983 -122013313 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 925 320 300 15 118 chrX 44637552 44637688 -122012608 + MIRc SINE MIR 2 123 -145 1 925 21 57 0 0 chrX 44637782 44637817 -122012479 + AT_rich Low_complexity Low_complexity 1 35 0 1 925 441 295 35 24 chrX 44638378 44638548 -122011748 - MER121 Unknown Unknown -128 284 113 1 925 1151 217 154 27 chrX 44639215 44639406 -122010890 - ORR1D1 LTR MaLR 0 374 155 1 925 458 33 17 0 chrX 44639406 44639466 -122010830 + (GA)n Simple_repeat Simple_repeat 1 61 0 1 925 1151 217 154 27 chrX 44639466 44639606 -122010690 - ORR1D1 LTR MaLR -220 154 2 1 925 317 293 99 63 chrX 44639968 44640190 -122010106 - LTR88b LTR Gypsy? -504 333 104 1 925 919 233 19 5 chrX 44640416 44640627 -122009669 + B3 SINE B2 3 216 0 1 925 324 0 0 0 chrX 44640961 44640997 -122009299 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 925 1224 113 274 0 chrX 44641001 44641249 -122009047 - ORR1A4 LTR MaLR -8 321 6 1 925 417 20 0 0 chrX 44641249 44641299 -122008997 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 925 443 233 209 0 chrX 44641601 44641764 -122008532 + Lx9 LINE L1 7404 7600 -44 1 925 24 32 0 0 chrX 44641781 44641812 -122008484 + AT_rich Low_complexity Low_complexity 1 31 0 1 925 248 345 74 0 chrX 44641955 44642052 -122008244 + MIRb SINE MIR 2 107 -161 1 925 2643 198 25 65 chrX 44642310 44642909 -122007387 - RMER15 LTR ERVL 0 575 1 1 925 264 299 40 81 chrX 44642947 44643096 -122007200 + MIR SINE MIR 8 150 -112 1 925 237 301 54 14 chrX 44643378 44643452 -122006844 + B4A SINE B4 3 79 -213 1 925 247 259 45 34 chrX 44643963 44644051 -122006245 - L3 LINE CR1 -251 4238 4150 1 925 438 321 103 0 chrX 44645246 44645430 -122004866 - MIRb SINE MIR -6 262 60 1 925 762 41 0 0 chrX 44646618 44646716 -122003580 + (TC)n Simple_repeat Simple_repeat 2 99 0 1 925 261 0 0 0 chrX 44646716 44646744 -122003552 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 925 507 252 169 5 chrX 44647631 44647796 -122002500 + Lx7 LINE L1 7158 7358 -338 1 925 333 93 0 0 chrX 44647796 44647850 -122002446 + (TTGG)n Simple_repeat Simple_repeat 2 55 0 1 925 507 252 169 5 chrX 44647850 44647903 -122002393 + Lx7 LINE L1 7359 7411 -285 1 925 394 234 68 12 chrX 44647910 44648089 -122002207 + Lx7 LINE L1 7537 7688 -8 1 925 469 217 113 6 chrX 44648407 44648569 -122001727 + MLT2B4 LTR ERVL 334 527 -40 1 925 268 303 182 33 chrX 44648647 44648828 -122001468 + MIR SINE MIR 21 228 -34 1 925 1320 240 73 6 chrX 44648993 44649307 -122000989 + MER58B DNA MER1_type 6 340 -1 1 925 920 312 45 33 chrX 44649573 44650093 -122000203 - L1MA4A LINE L1 -220 6077 5533 1 925 305 362 54 89 chrX 44650150 44650556 -121999740 + L2a LINE L2 2365 2756 -663 1 925 450 264 87 43 chrX 44650567 44650797 -121999499 - LTR37B LTR ERV1 -11 457 218 1 925 230 359 79 87 chrX 44651265 44651506 -121998790 + L2a LINE L2 3180 3418 -8 1 925 477 0 0 0 chrX 44651670 44651723 -121998573 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 925 432 0 0 0 chrX 44651747 44651795 -121998501 + (TAA)n Simple_repeat Simple_repeat 1 48 0 2 925 4833 167 35 0 chrX 44651830 44652651 -121997645 + Lx2B LINE L1 6134 6983 -17 2 925 300 53 0 0 chrX 44652652 44652690 -121997606 + (TAA)n Simple_repeat Simple_repeat 2 39 0 2 925 1412 209 81 31 chrX 44654121 44654487 -121995809 + ORR1D1 LTR MaLR 3 374 -10 2 925 271 270 32 80 chrX 44655980 44656105 -121994191 + L2a LINE L2 3307 3425 -1 2 925 239 299 45 0 chrX 44657489 44657556 -121992740 + MER5A1 DNA MER1_type 8 77 -89 2 925 1836 191 47 6 chrX 44658610 44658969 -121991327 + ORR1D1 LTR MaLR 1 374 0 2 925 740 274 55 10 chrX 44659549 44659755 -121990541 + ORR1D1 LTR MaLR 84 287 -97 2 925 266 316 10 10 chrX 44659746 44659842 -121990454 - MER5A DNA MER1_type -92 97 2 2 925 329 364 35 0 chrX 44661719 44661892 -121988404 + MIRb SINE MIR 29 207 -61 2 925 411 301 62 25 chrX 44662797 44663039 -121987257 + L1MA9 LINE L1 5945 6195 -117 2 925 576 307 92 15 chrX 44664250 44664521 -121985775 - B4 SINE B4 0 292 1 2 925 810 139 25 6 chrX 44666214 44666373 -121983923 + A-rich Low_complexity Low_complexity 3 164 0 2 925 375 301 94 26 chrX 44666504 44666695 -121983601 + MIR SINE MIR 15 218 -44 2 925 460 299 33 14 chrX 44667246 44667406 -121982890 + MLT1A0 LTR MaLR 162 352 -22 2 925 896 148 7 0 chrX 44668098 44668247 -121982049 + URR1A DNA MER1_type 77 226 0 2 925 648 341 68 62 chrX 44669882 44670147 -121980149 - L1ME3A LINE L1 -8 6165 5909 2 925 1910 136 55 89 chrX 44670147 44670468 -121979828 + ORR1B2 LTR MaLR 1 298 -69 2 925 483 18 0 0 chrX 44670468 44670524 -121979772 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 2 925 1910 136 55 89 chrX 44670524 44670582 -121979714 + ORR1B2 LTR MaLR 299 367 0 2 925 648 341 68 62 chrX 44670582 44670816 -121979480 - L1ME3A LINE L1 -265 5908 5663 2 925 278 264 43 52 chrX 44671339 44671455 -121978841 - PB1D10 SINE Alu -1 116 2 2 925 262 311 132 0 chrX 44671728 44671834 -121978462 + MLT1E1A LTR MaLR 560 662 -18 2 925 461 273 23 67 chrX 44671867 44672045 -121978251 - MLT1D LTR MaLR -60 407 254 2 925 567 313 49 54 chrX 44672103 44672326 -121977970 - MLT1D LTR MaLR -283 222 1 2 925 1799 125 26 75 chrX 44672546 44672892 -121977404 + ORR1A4 LTR MaLR 1 329 0 2 925 278 250 96 12 chrX 44674151 44674317 -121975979 + L1MEc LINE L1 1792 1971 -4429 2 925 22 0 0 0 chrX 44674360 44674382 -121975914 + AT_rich Low_complexity Low_complexity 1 22 0 2 925 473 292 46 35 chrX 44674400 44674743 -121975553 + L1MEc LINE L1 2100 2451 -3949 2 925 1431 68 16 5 chrX 44674743 44674935 -121975361 + B2_Mm2 SINE B2 1 194 -1 2 925 473 314 47 42 chrX 44674935 44674974 -121975322 + L1MEc LINE L1 2450 2484 -3835 2 925 718 122 56 35 chrX 44674974 44675118 -121975178 + B1_Mm SINE Alu 1 147 0 2 925 378 343 49 52 chrX 44675118 44675434 -121974862 + L1MEc LINE L1 2485 2797 -3522 2 925 907 235 311 0 chrX 44675434 44675723 -121974573 - MTE2b LTR MaLR 0 379 1 2 925 378 343 49 52 chrX 44675723 44675922 -121974374 + L1MEc LINE L1 2798 2997 -3322 2 925 22 0 0 0 chrX 44676017 44676039 -121974257 + AT_rich Low_complexity Low_complexity 1 22 0 2 925 368 356 129 6 chrX 44676073 44676251 -121974045 - Tigger7 DNA MER2_type -2291 200 1 2 925 335 287 98 0 chrX 44676380 44676523 -121973773 + L1MC LINE L1 3027 3183 -2963 2 925 258 32 0 0 chrX 44676581 44676612 -121973684 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 925 358 276 32 16 chrX 44676837 44676962 -121973334 + MIRc SINE MIR 135 261 -7 2 925 267 79 0 0 chrX 44677049 44677087 -121973209 + (TC)n Simple_repeat Simple_repeat 2 39 0 2 925 21 36 0 0 chrX 44677942 44677970 -121972326 + AT_rich Low_complexity Low_complexity 1 28 0 2 925 1194 174 274 32 chrX 44678050 44678172 -121972124 + MTC LTR MaLR 1 122 -299 2 925 180 0 0 0 chrX 44678172 44678192 -121972104 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2 925 1194 174 274 32 chrX 44678192 44678408 -121971888 + MTC LTR MaLR 123 420 -1 2 925 183 42 0 0 chrX 44678524 44678548 -121971748 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 925 243 175 34 34 chrX 44679017 44679076 -121971220 + GA-rich Low_complexity Low_complexity 2 60 0 2 925 1843 155 112 6 chrX 44679147 44679503 -121970793 + ORR1B1 LTR MaLR 1 394 0 2 925 218 56 0 27 chrX 44679550 44679587 -121970709 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 2 925 511 283 0 34 chrX 44679644 44679761 -121970535 + RSINE1 SINE B4 3 115 -50 2 925 360 0 0 0 chrX 44679762 44679802 -121970494 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 925 248 323 92 46 chrX 44679969 44680099 -121970197 + MamGypLTR1c LTR Gypsy 64 199 -604 2 925 423 266 23 33 chrX 44682200 44682436 -121967860 + L1MC4 LINE L1 6680 6906 -1055 2 925 330 333 37 73 chrX 44682698 44682944 -121967352 - RMER15 LTR ERVL 0 575 339 2 925 619 216 143 16 chrX 44683700 44683945 -121966351 + Lx9 LINE L1 7367 7642 -2 2 925 322 221 0 68 chrX 44685532 44685605 -121964691 + PB1D7 SINE Alu 42 109 -11 2 925 643 265 54 0 chrX 44685994 44686141 -121964155 + B3A SINE B2 3 157 -41 2 925 408 40 0 0 chrX 44686144 44686194 -121964102 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 925 207 0 0 0 chrX 44686213 44686236 -121964060 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 925 361 154 15 0 chrX 44686675 44686740 -121963556 + MamGypLTR1d LTR Gypsy 748 813 0 2 925 4626 109 49 1 chrX 44688321 44689019 -121961277 + Lx LINE L1 5924 6654 0 2 925 522 328 33 33 chrX 44689124 44689307 -121960989 + MER20 DNA MER1_type 9 191 -28 2 925 690 289 17 0 chrX 44689312 44689485 -121960811 - MER5A DNA MER1_type -2 187 12 2 925 212 346 40 85 chrX 44691946 44692123 -121958173 - L3 LINE CR1 -113 4376 4208 2 925 237 318 15 0 chrX 44694793 44694859 -121955437 + MIR SINE MIR 69 135 -127 2 925 1084 245 79 57 chrX 44694954 44695322 -121954974 + MTEa LTR MaLR 1 376 -3 2 926 1476 60 5 0 chrX 44696761 44696945 -121953351 - B2_Mm1t SINE B2 -7 186 2 2 926 305 315 100 37 chrX 44697434 44697778 -121952518 + MLT1A1 LTR MaLR 1 408 0 2 926 209 108 0 26 chrX 44699024 44699062 -121951234 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 2 926 494 333 13 13 chrX 44699186 44699341 -121950955 - MER63B DNA AcHobo 0 436 282 2 926 476 368 29 19 chrX 44699567 44699775 -121950521 + MER58A DNA MER1_type 1 210 -14 2 926 2594 96 136 0 chrX 44700305 44700723 -121949573 + IAPLTR2_Mm LTR ERVK 1 475 0 2 926 1190 49 10 102 chrX 44700724 44700930 -121949366 + IAPEz-int LTR ERVK 9 195 -6286 2 926 227 320 0 0 chrX 44700930 44700980 -121949316 + RLTR27 LTR ERVK 223 272 -37 2 926 3740 58 0 18 chrX 44700980 44701487 -121948809 + IAPEz-int LTR ERVK 165 662 -5819 2 926 867 76 0 0 chrX 44701487 44701606 -121948690 + IAPEz-int LTR ERVK 1359 1477 -5004 2 926 1761 99 8 0 chrX 44701601 44701853 -121948443 + IAPEz-int LTR ERVK 2244 2497 -5183 2 926 14353 46 4 3 chrX 44701852 44703673 -121946623 + IAPEz-int LTR ERVK 4656 6479 -2 2 926 2580 98 136 0 chrX 44703675 44704093 -121946203 + IAPLTR2_Mm LTR ERVK 1 475 0 2 926 2293 121 19 38 chrX 44704201 44704424 -121945872 + Lx2B LINE L1 6632 6854 -146 2 926 1920 103 120 0 chrX 44704424 44704716 -121945580 + ORR1A2 LTR MaLR 1 327 0 2 926 2293 121 19 38 chrX 44704716 44704861 -121945435 + Lx2B LINE L1 6855 6993 -7 2 926 2020 87 116 35 chrX 44704971 44705316 -121944980 - Lx2 LINE L1 -7 6990 6618 2 926 730 46 0 44 chrX 44705570 44705683 -121944613 + L1_Mus1 LINE L1 6458 6565 -2 2 926 7116 15 0 0 chrX 44705802 44706604 -121943692 + L1Md_A LINE L1 5781 6582 0 2 926 370 329 39 26 chrX 44707416 44707569 -121942727 + MIR SINE MIR 1 155 -107 2 926 411 302 0 45 chrX 44708212 44708323 -121941973 + RSINE1 SINE B4 60 165 0 2 926 262 325 57 49 chrX 44708367 44708490 -121941806 + MIRb SINE MIR 72 195 -73 2 926 33725 36 0 0 chrX 44708990 44714289 -121936007 + L1Md_T LINE L1 194 5589 -297 2 926 8919 6 3 0 chrX 44714289 44715280 -121935016 + L1Md_T LINE L1 5590 6583 -2 2 926 250 283 94 8 chrX 44715916 44716044 -121934252 + MIR SINE MIR 114 252 -10 2 926 461 326 117 57 chrX 44716098 44716381 -121933915 + LTR88b LTR Gypsy? 6 305 -532 2 926 496 214 53 38 chrX 44716656 44716787 -121933509 + MER82 DNA MER2_type 377 509 -144 2 926 832 271 132 50 chrX 44717374 44717956 -121932340 + L1MC3 LINE L1 7023 7652 -133 2 926 366 242 330 6 chrX 44717991 44718120 -121932176 + B3 SINE B2 56 211 -5 2 926 230 226 0 0 chrX 44718122 44718184 -121932112 + L1MC3 LINE L1 7647 7708 -77 2 926 457 325 0 37 chrX 44718544 44718707 -121931589 + RSINE1 SINE B4 4 160 -5 2 926 225 341 57 34 chrX 44718744 44718832 -121931464 + LTR88b LTR Gypsy? 672 761 -76 2 926 1301 291 93 18 chrX 44718929 44719522 -121930774 + MER63C DNA AcHobo 6 666 -264 2 926 356 73 0 35 chrX 44719537 44719594 -121930702 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 2 926 432 0 0 0 chrX 44720158 44720206 -121930090 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 926 531 0 0 0 chrX 44720465 44720524 -121929772 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 926 247 313 82 0 chrX 44720825 44720959 -121929337 + L1MB1 LINE L1 5323 5467 -701 2 926 2289 193 41 38 chrX 44720961 44721743 -121928553 - RMER6A LTR ERVK 0 756 1 2 926 367 357 73 64 chrX 44721789 44722133 -121928163 - ORR1E LTR MaLR -8 351 5 2 926 1187 319 37 5 chrX 44722152 44722725 -121927571 + L1MB1 LINE L1 5517 6107 -61 2 926 713 208 36 182 chrX 44722978 44723231 -121927065 + B3 SINE B2 1 216 0 2 926 1137 273 82 14 chrX 44723375 44723728 -121926568 - MTE2a LTR MaLR 0 379 3 2 926 290 355 57 102 chrX 44723744 44723901 -121926395 + MTEa LTR MaLR 1 150 -229 2 926 326 410 6 6 chrX 44723968 44724147 -121926149 + MT2A LTR ERVL 284 462 -71 2 926 265 245 0 0 chrX 44724335 44724388 -121925908 - B1_Mur1 SINE Alu -29 120 68 2 926 327 247 161 0 chrX 44724915 44725008 -121925288 + RSINE1 SINE B4 12 119 -46 2 926 285 109 0 0 chrX 44725010 44725056 -121925240 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 926 4234 70 18 7 chrX 44725205 44725763 -121924533 + L1Md_F2 LINE L1 6019 6582 0 2 926 1433 249 77 28 chrX 44725766 44725969 -121924327 + L1MC1 LINE L1 5326 5544 -789 2 926 1223 153 48 57 chrX 44725969 44726197 -121924099 + URR1A DNA MER1_type 1 226 0 2 926 1433 256 82 28 chrX 44726197 44726607 -121923689 + L1MC1 LINE L1 5545 5984 -2011 2 926 702 282 41 17 chrX 44726914 44727187 -121923109 - L1M2 LINE L1 -522 5775 5493 2 926 192 77 0 0 chrX 44727187 44727213 -121923083 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 926 702 282 41 17 chrX 44727213 44727231 -121923065 - L1M2 LINE L1 -805 5492 5477 2 926 1257 280 41 10 chrX 44727231 44727642 -121922654 - Lx6 LINE L1 -26 7434 7011 3 926 755 247 101 0 chrX 44727820 44728047 -121922249 + L1MC1 LINE L1 6083 6332 -1 2 926 410 176 168 0 chrX 44728168 44728287 -121922009 - Lx6 LINE L1 -26 7434 7296 3 926 931 146 0 7 chrX 44728810 44728955 -121921341 - B1_Mur4 SINE Alu -6 144 1 3 926 1151 45 13 0 chrX 44729124 44729310 -121920986 - L1Md_F3 LINE L1 0 6584 6415 3 926 259 170 0 41 chrX 44730072 44730121 -121920175 + MTE2a LTR MaLR 278 324 -55 3 926 220 338 161 27 chrX 44730247 44730396 -121919900 - MIRb SINE MIR -16 252 84 3 926 565 346 121 4 chrX 44730421 44730653 -121919643 + MLT1A0 LTR MaLR 32 290 -75 3 926 557 140 19 0 chrX 44730802 44730909 -121919387 + CT-rich Low_complexity Low_complexity 1 109 0 3 926 906 302 132 22 chrX 44731070 44731480 -121918816 - LTR65 LTR ERV1 -20 649 195 3 926 322 316 114 16 chrX 44732525 44732718 -121917578 - MTEa LTR MaLR -113 266 55 3 926 225 0 0 0 chrX 44732761 44732786 -121917510 + (A)n Simple_repeat Simple_repeat 1 25 0 3 926 3030 202 32 5 chrX 44732866 44733424 -121916872 - Lx5 LINE L1 -1 7049 6477 3 926 818 161 71 47 chrX 44734508 44734678 -121915618 - Lx5 LINE L1 -143 6907 6734 3 926 1071 216 76 121 chrX 44734846 44735230 -121915066 - MT2A LTR ERVL -104 497 1 3 926 340 75 19 0 chrX 44735232 44735285 -121915011 - MERVL_2A-int LTR ERVL -2 5759 5706 3 926 258 250 0 48 chrX 44735285 44735369 -121914927 - ORR1A3-int LTR MaLR -1324 639 560 3 926 2762 172 86 12 chrX 44735369 44736379 -121913917 - MERVL_2A-int LTR ERVL -139 5622 4537 3 926 3256 109 83 17 chrX 44736379 44736911 -121913385 + RMER2 LTR ERV1 1 567 0 3 926 2762 193 17 17 chrX 44736911 44736932 -121913364 - MERVL_2A-int LTR ERVL -1225 4536 4516 3 926 1953 179 44 102 chrX 44736928 44737119 -121913177 - MERVL_2A-int LTR ERVL -1483 4278 4132 3 926 3205 53 2 0 chrX 44737119 44737513 -121912783 - L1Md_F2 LINE L1 -12 6570 6176 3 926 1953 179 44 102 chrX 44737513 44737820 -121912476 - MERVL_2A-int LTR ERVL -1630 4131 3809 3 926 1369 221 202 103 chrX 44737820 44737986 -121912310 + RMER19C LTR ERVK 6 266 -345 3 926 377 65 0 0 chrX 44737986 44738048 -121912248 + L1_Mus3 LINE L1 6577 6638 0 3 926 1369 221 202 103 chrX 44738048 44738208 -121912088 + RMER19C LTR ERVK 267 431 -180 3 926 189 0 0 0 chrX 44738208 44738229 -121912067 + (CTG)n Simple_repeat Simple_repeat 1 21 0 3 926 1369 221 202 103 chrX 44738229 44738446 -121911850 + RMER19C LTR ERVK 432 604 -7 3 926 2123 224 4 19 chrX 44738448 44738790 -121911506 - MERVL_2A-int LTR ERVL -1944 3817 3483 3 926 3403 38 2 0 chrX 44738790 44739185 -121911111 + MTA_Mm LTR MaLR 1 396 0 3 926 2123 224 4 19 chrX 44739185 44739306 -121910990 - MERVL_2A-int LTR ERVL -2279 3482 3361 3 926 2857 31 0 0 chrX 44739456 44739808 -121910488 - L1Md_A LINE L1 -639 5943 5592 3 926 1045 123 0 43 chrX 44739808 44739995 -121910301 + L1Md_F2 LINE L1 6391 6569 -13 3 926 290 80 20 0 chrX 44740432 44740482 -121909814 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 3 926 280 338 6 68 chrX 44741361 44741523 -121908773 + Charlie8 DNA MER1_type 38 189 -2239 3 926 422 360 48 12 chrX 44743198 44743364 -121906932 - ORR1E LTR MaLR -187 172 1 3 926 640 260 7 7 chrX 44744319 44744474 -121905822 + MER5A1 DNA MER1_type 8 162 -4 3 926 401 328 126 80 chrX 44744575 44745020 -121905276 + MLT1J LTR MaLR 1 460 -52 3 926 403 267 33 33 chrX 44745378 44745498 -121904798 + PB1D7 SINE Alu 1 120 0 3 926 507 159 0 0 chrX 44745978 44746091 -121904205 + CT-rich Low_complexity Low_complexity 1 113 0 3 926 482 262 28 9 chrX 44746091 44746199 -121904097 - RSINE1 SINE B4 -12 153 44 3 926 753 325 15 85 chrX 44747084 44747474 -121902822 - MLT1A0 LTR MaLR 0 365 3 3 926 210 222 190 10 chrX 44747686 44747786 -121902510 + MIRc SINE MIR 136 253 -15 3 926 285 366 89 0 chrX 44747857 44747980 -121902316 - MIR SINE MIR -97 165 32 3 926 206 62 0 30 chrX 44748372 44748405 -121901891 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 3 926 594 289 80 69 chrX 44748407 44748768 -121901528 - Lx8 LINE L1 -1 7472 7108 3 926 2745 55 6 0 chrX 44748792 44749137 -121901159 - L1_Mus2 LINE L1 -1 6565 6219 3 926 728 200 30 0 chrX 44749164 44749299 -121900997 + B1_Mur3 SINE Alu 1 139 -10 3 926 234 0 0 0 chrX 44749299 44749325 -121900971 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 926 1019 282 25 4 chrX 44750961 44751239 -121899057 + B4A SINE B4 3 286 -6 3 926 211 378 102 0 chrX 44751408 44751506 -121898790 + B1F SINE Alu 15 122 -27 3 926 180 283 177 42 chrX 44752343 44752439 -121897857 + L2a LINE L2 3295 3403 -23 3 926 518 141 61 0 chrX 44753030 44753129 -121897167 + Lx2 LINE L1 6838 6942 -55 3 926 1799 62 4 43 chrX 44753561 44753815 -121896481 - L1_Mus2 LINE L1 -2 6564 6321 3 926 5054 80 7 0 chrX 44753818 44754838 -121895458 + L1_Mus2 LINE L1 5249 6276 -290 3 926 4132 239 77 41 chrX 44754859 44756050 -121894246 - Lx6 LINE L1 -14 7446 6213 3 926 749 215 35 5 chrX 44756046 44756247 -121894049 + Lx5 LINE L1 5751 5957 -1093 3 926 3176 243 146 32 chrX 44756265 44758757 -121891539 + Lx9 LINE L1 4482 7230 -414 3 926 1220 279 168 53 chrX 44758762 44759513 -121890783 + Lx8 LINE L1 5278 6155 -1318 3 926 1172 34 0 0 chrX 44759513 44759660 -121890636 - L1Md_A LINE L1 0 6582 6436 3 926 1220 320 110 60 chrX 44759660 44760320 -121889976 + Lx8 LINE L1 6156 6859 -614 3 926 613 277 7 7 chrX 44762657 44762795 -121887501 + MamSINE1 SINE tRNA 29 166 -124 3 926 531 0 0 0 chrX 44762796 44762855 -121887441 + (GA)n Simple_repeat Simple_repeat 1 59 0 3 926 543 16 0 0 chrX 44763635 44763699 -121886597 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 926 297 0 0 0 chrX 44763699 44763731 -121886565 + (GA)n Simple_repeat Simple_repeat 1 33 0 3 926 434 70 0 0 chrX 44763733 44763790 -121886506 - L1Md_F LINE L1 -5833 686 630 3 926 232 167 0 20 chrX 44763788 44763837 -121886459 - L1VL1 LINE L1 -6322 100 53 3 926 26456 96 71 2 chrX 44763923 44768726 -121881570 + L1Md_F2 LINE L1 446 5586 -297 3 926 7599 60 14 5 chrX 44768726 44769703 -121880593 + L1Md_F2 LINE L1 5587 6572 -10 3 926 5299 183 42 6 chrX 44769707 44770762 -121879534 + Lx2B LINE L1 5908 7000 0 3 926 245 326 11 0 chrX 44770767 44770859 -121879437 - L1M5 LINE L1 -633 5529 5437 3 926 222 350 82 6 chrX 44771098 44771256 -121879040 - L2a LINE L2 -65 3361 3192 3 926 1641 132 27 0 chrX 44771330 44771588 -121878708 + IAPLTR2_Mm LTR ERVK 1 265 -210 3 926 39449 6 0 1 chrX 44771634 44778593 -121871703 - L1Md_A LINE L1 -1 6581 1 3 926 985 69 130 45 chrX 44778593 44778824 -121871472 + IAPLTR2a LTR ERVK 207 475 0 3 926 2362 282 40 9 chrX 44778924 44779691 -121870605 - Lx8 LINE L1 -356 7117 6327 3 926 199 300 17 0 chrX 44779725 44779785 -121870511 - L2a LINE L2 -257 3130 3070 3 926 8331 116 89 8 chrX 44780043 44782070 -121868226 + L1_Mur1 LINE L1 208 2647 -3239 3 926 3205 94 22 21 chrX 44782080 44782613 -121867683 - L1_Mur1 LINE L1 -2720 3166 2633 3 926 411 73 0 0 chrX 44782615 44782670 -121867626 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 926 243 301 19 46 chrX 44783811 44783919 -121866377 - RLTR22_Mur LTR ERVK -469 1379 1275 3 926 317 116 14 0 chrX 44784010 44784079 -121866217 + (TTTG)n Simple_repeat Simple_repeat 2 71 0 3 926 235 69 0 0 chrX 44784296 44784325 -121865971 - B1_Mur2 SINE Alu -55 94 66 3 926 225 182 0 83 chrX 44784297 44784345 -121865951 - 4.5SRNA scRNA scRNA -6 88 45 3 926 203 152 0 0 chrX 44785430 44785463 -121864833 + A-rich Low_complexity Low_complexity 3 35 0 3 926 627 268 103 58 chrX 44786526 44786855 -121863441 + MER2 DNA MER2_type 1 344 -1 3 926 371 357 28 14 chrX 44787179 44787324 -121862972 + MIR3 SINE MIR 1 147 -61 3 926 268 301 13 27 chrX 44789002 44789077 -121861219 + RSINE1 SINE B4 26 99 -66 3 926 34812 71 1 25 chrX 44789078 44795373 -121854923 + L1Md_T LINE L1 99 5586 -297 3 926 8026 57 0 0 chrX 44795373 44796369 -121853927 + L1Md_T LINE L1 5587 6582 0 3 926 333 288 27 0 chrX 44796375 44796448 -121853848 + RSINE1 SINE B4 87 161 -4 3 926 652 209 5 23 chrX 44796454 44796670 -121853626 + GA-rich Low_complexity Low_complexity 1 211 0 3 926 378 259 42 28 chrX 44796892 44797035 -121853261 + L1MC LINE L1 5390 5534 -2348 3 926 1438 28 6 0 chrX 44797038 44797215 -121853081 - L1Md_F2 LINE L1 -742 5840 5663 3 926 5629 66 1 12 chrX 44797215 44797956 -121852340 + L1Md_F2 LINE L1 5848 6580 -2 3 926 344 325 100 50 chrX 44797965 44798185 -121852111 + L1MC LINE L1 5536 5766 -2116 3 926 321 294 48 19 chrX 44798285 44798389 -121851907 - MER2 DNA MER2_type -1 344 238 3 926 257 379 141 12 chrX 44798595 44798758 -121851538 + MIR SINE MIR 8 191 -71 3 926 886 287 5 0 chrX 44798784 44798993 -121851303 + B3 SINE B2 1 210 -6 3 926 23 54 0 0 chrX 44799030 44799067 -121851229 + AT_rich Low_complexity Low_complexity 1 37 0 3 926 1182 143 126 0 chrX 44799447 44799677 -121850619 + L1_Mus2 LINE L1 4573 4831 -1052 3 926 31550 76 7 9 chrX 44799688 44804846 -121845450 + L1Md_F2 LINE L1 446 5586 -297 3 926 8134 45 2 0 chrX 44804847 44805831 -121844465 + L1Md_F2 LINE L1 5588 6573 -9 3 926 6970 77 34 4 chrX 44805834 44807078 -121843218 + L1_Mus2 LINE L1 5289 6565 -1 3 926 2363 66 119 11 chrX 44807141 44807493 -121842803 + RLTR10 LTR ERVK 1 390 0 3 926 457 345 88 10 chrX 44807824 44808029 -121842267 - RMER15 LTR ERVL -13 562 342 3 926 268 136 225 70 chrX 44808035 44808106 -121842190 - URR1B DNA MER1_type 0 225 144 3 926 366 23 0 0 chrX 44808118 44808161 -121842135 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 926 470 75 0 0 chrX 44808161 44808228 -121842068 - B1_Mus2 SINE Alu -1 146 80 3 926 370 252 141 0 chrX 44808226 44808325 -121841971 - URR1B DNA MER1_type -97 128 16 3 926 339 25 0 0 chrX 44808329 44808369 -121841927 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 926 462 143 0 0 chrX 44808761 44808838 -121841458 + (TCTCCC)n Simple_repeat Simple_repeat 3 79 0 3 926 761 295 111 55 chrX 44808838 44809200 -121841096 + MLT1F1 LTR MaLR 177 558 -11 3 926 22 0 0 0 chrX 44810132 44810154 -121840142 + AT_rich Low_complexity Low_complexity 1 22 0 3 926 248 366 93 11 chrX 44810429 44810630 -121839666 - MIRb SINE MIR -40 228 5 3 926 669 127 0 0 chrX 44811387 44811521 -121838775 + (TC)n Simple_repeat Simple_repeat 1 134 0 3 926 234 0 0 0 chrX 44811521 44811547 -121838749 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 926 26 0 0 0 chrX 44812240 44812266 -121838030 + AT_rich Low_complexity Low_complexity 1 26 0 3 926 249 312 63 26 chrX 44812517 44812647 -121837649 + MIRc SINE MIR 20 155 -53 3 926 1746 312 83 43 chrX 44812777 44813773 -121836523 - MTEb-int LTR MaLR -361 1009 2 3 926 1017 281 51 25 chrX 44813776 44814050 -121836246 - MTEb LTR MaLR -3 376 96 3 926 413 36 18 0 chrX 44814728 44814783 -121835513 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 926 459 300 81 69 chrX 44816711 44816958 -121833338 + MIR SINE MIR 11 260 -2 4 926 440 298 97 92 chrX 44819359 44819555 -121830741 + B3 SINE B2 8 204 -12 4 926 23 0 0 0 chrX 44820526 44820549 -121829747 + AT_rich Low_complexity Low_complexity 1 23 0 4 926 662 276 7 107 chrX 44820873 44821173 -121829123 + Charlie18a DNA MER1_type 1 270 -72 4 926 180 163 116 0 chrX 44822799 44822842 -121827454 - L3 LINE CR1 -3 4486 4439 4 926 246 282 177 13 chrX 44822843 44822922 -121827374 + Charlie18a DNA MER1_type 1 92 -250 4 926 690 122 0 0 chrX 44823015 44823122 -121827174 + (TTTC)n Simple_repeat Simple_repeat 2 108 0 4 926 304 289 9 19 chrX 44823129 44823235 -121827061 - Lx2B LINE L1 -6 6994 6890 4 926 1112 261 50 81 chrX 44823392 44823750 -121826546 + MTE2b LTR MaLR 5 351 -28 4 926 472 276 22 7 chrX 44823873 44824008 -121826288 - MIR SINE MIR -94 168 32 4 926 396 0 0 0 chrX 44824454 44824498 -121825798 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 926 253 165 71 0 chrX 44826196 44826281 -121824015 - Lx9 LINE L1 -4 7640 7550 4 115 1447 212 57 45 chrX 44826355 44826690 -121823606 - ORR1D1 LTR MaLR -2 372 34 4 927 1342 253 47 47 chrX 44826835 44827079 -121823217 - MTE2b LTR MaLR -11 368 113 4 927 2991 35 0 0 chrX 44827079 44827425 -121822871 - ORR1A1 LTR MaLR 0 346 1 4 927 1342 253 47 47 chrX 44827425 44827545 -121822751 - MTE2b LTR MaLR -267 112 4 4 927 394 273 56 6 chrX 44828705 44828867 -121821429 + L1MA6 LINE L1 5942 6111 -189 4 927 541 312 19 87 chrX 44828913 44829017 -121821279 + B4A SINE B4 2 98 -194 4 927 264 30 0 0 chrX 44829017 44829050 -121821246 + (TATAA)n Simple_repeat Simple_repeat 1 33 0 4 927 541 312 19 87 chrX 44829050 44829257 -121821039 + B4A SINE B4 99 291 -1 4 927 224 303 26 13 chrX 44829257 44829334 -121820962 + (CATG)n Simple_repeat Simple_repeat 1 78 0 4 927 4708 161 51 17 chrX 44829734 44830610 -121819686 - RMER13B LTR ERVK 0 908 3 4 927 288 0 0 0 chrX 44830904 44830936 -121819360 + (T)n Simple_repeat Simple_repeat 1 32 0 4 927 190 395 90 14 chrX 44831574 44831864 -121818432 + L3 LINE CR1 4099 4410 -79 4 927 372 294 32 32 chrX 44832772 44832895 -121817401 - L2a LINE L2 0 3426 3304 4 927 402 344 136 30 chrX 44832925 44833189 -121817107 + B4 SINE B4 1 292 0 4 927 759 232 23 11 chrX 44833340 44833502 -121816794 + ID_B1 SINE B4 83 243 -49 4 927 2022 137 76 42 chrX 44834826 44835207 -121815089 + ORR1B1 LTR MaLR 1 394 0 4 927 297 358 43 36 chrX 44836655 44836794 -121813502 + MIRc SINE MIR 16 155 -113 4 927 1597 245 93 96 chrX 44837975 44838549 -121811747 + Lx8 LINE L1 6755 7325 -148 4 927 1124 114 0 6 chrX 44838549 44838726 -121811570 + (GAAA)n Simple_repeat Simple_repeat 1 176 0 4 927 1597 245 93 96 chrX 44838726 44838869 -121811427 + Lx8 LINE L1 7326 7470 -3 4 927 729 300 81 4 chrX 44838889 44839147 -121811149 + Charlie4a DNA MER1_type 26 303 -205 4 927 386 348 16 58 chrX 44839155 44839344 -121810952 + MER58A DNA MER1_type 42 222 -2 4 927 279 266 193 14 chrX 44839346 44839491 -121810805 + Charlie4a DNA MER1_type 298 468 -40 4 927 187 292 150 62 chrX 44839663 44839776 -121810520 - L2a LINE L2 -9 3366 3244 4 927 505 295 52 32 chrX 44839966 44840120 -121810176 - RSINE1 SINE B4 -6 159 3 4 927 305 317 66 51 chrX 44840135 44840331 -121809965 - L2a LINE L2 -303 3123 2925 4 927 182 360 0 0 chrX 44840450 44840500 -121809796 + MER5B DNA MER1_type 109 158 -20 4 927 1227 239 48 137 chrX 44840818 44841211 -121809085 + ORR1D2 LTR MaLR 1 358 -12 4 927 429 383 84 19 chrX 44841242 44841668 -121808628 - L2a LINE L2 -914 2505 2052 4 927 364 242 69 15 chrX 44842091 44842221 -121808075 + MER2 DNA MER2_type 86 222 -123 4 927 469 330 0 17 chrX 44842233 44842269 -121808027 + PB1 SINE Alu 3 37 -90 4 927 3099 60 68 45 chrX 44842269 44842709 -121807587 - L1_Mus2 LINE L1 0 6566 6117 4 927 469 330 0 17 chrX 44842709 44842789 -121807507 + PB1 SINE Alu 38 117 -10 4 927 243 362 19 19 chrX 44842805 44842912 -121807384 + MER2 DNA MER2_type 204 310 -35 4 927 593 301 71 94 chrX 44842919 44843271 -121807025 + ORR1E LTR MaLR 9 352 -7 4 927 361 348 102 9 chrX 44843648 44843874 -121806422 + MIR SINE MIR 16 262 0 4 927 498 328 68 86 chrX 44844399 44844619 -121805677 + B3A SINE B2 1 216 0 4 927 187 355 83 9 chrX 44844730 44844830 -121805466 - MIRb SINE MIR -121 147 40 4 927 306 0 0 0 chrX 44844830 44844864 -121805432 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 927 492 274 142 59 chrX 44845163 44845513 -121804783 - MLT1C LTR MaLR -19 486 78 4 927 653 264 131 24 chrX 44845664 44845870 -121804426 + MLT1D LTR MaLR 271 498 -7 4 927 285 167 0 0 chrX 44846463 44846517 -121803779 + (TGAA)n Simple_repeat Simple_repeat 1 54 0 4 927 252 341 8 0 chrX 44847272 44847398 -121802898 - L1M LINE L1 -699 5425 5299 4 927 198 0 0 0 chrX 44847514 44847536 -121802760 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 4 927 279 0 0 0 chrX 44850699 44850730 -121799566 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 927 6463 161 38 21 chrX 44850874 44852474 -121797822 - Lx3C LINE L1 0 7000 5350 4 927 181 351 62 31 chrX 44852605 44852702 -121797594 - L2b LINE L2 -5 3370 3271 4 927 301 204 146 11 chrX 44853113 44853202 -121797094 - L1ME2 LINE L1 -54 6110 6010 4 927 474 140 0 0 chrX 44853207 44853307 -121796989 + (GA)n Simple_repeat Simple_repeat 2 101 0 4 927 248 257 43 0 chrX 44853327 44853397 -121796899 - L1ME2 LINE L1 -195 5967 5895 4 927 4040 68 0 0 chrX 44853574 44854090 -121796206 + L1_Mus1 LINE L1 6052 6567 0 4 927 418 123 25 0 chrX 44854992 44855073 -121795223 + Lx2A LINE L1 6923 7005 -3 4 927 2560 96 0 5 chrX 44855137 44855504 -121794792 - L1_Mus4 LINE L1 0 6636 6272 4 927 28 29 0 0 chrX 44855510 44855545 -121794751 + AT_rich Low_complexity Low_complexity 1 35 0 4 927 785 81 0 7 chrX 44855545 44855664 -121794632 + Lx LINE L1 6034 6135 -519 4 927 622 200 35 7 chrX 44856208 44856349 -121793947 - B1_Mur3 SINE Alu 0 149 5 4 927 287 259 8 125 chrX 44856236 44856364 -121793932 - MT2B LTR ERVL -334 267 155 4 927 1022 141 0 11 chrX 44856367 44856547 -121793749 + CT-rich Low_complexity Low_complexity 3 180 0 4 927 2400 116 45 0 chrX 44856621 44856974 -121793322 + Lx3C LINE L1 6555 6923 -53 4 927 756 53 0 0 chrX 44856983 44857078 -121793218 - MTB_Mm LTR MaLR -312 95 1 4 927 3616 208 65 20 chrX 44857078 44858518 -121791778 - Lx6 LINE L1 -690 6770 5009 4 927 29923 100 9 16 chrX 44858575 44860929 -121789367 - L1_Mus2 LINE L1 -2 6564 4210 4 927 324 0 0 0 chrX 44860929 44860965 -121789331 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 927 29923 126 20 8 chrX 44860965 44864553 -121785743 - L1_Mus2 LINE L1 -1674 4209 572 4 927 245 240 49 59 chrX 44864586 44864688 -121785608 - L1VL1 LINE L1 -6318 104 4 4 927 13862 183 133 10 chrX 44864690 44866017 -121784279 - Lx6 LINE L1 -853 5024 3313 4 927 405 0 0 0 chrX 44866017 44866062 -121784234 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 927 13862 183 133 10 chrX 44866062 44867281 -121783015 - Lx6 LINE L1 -2565 3312 2068 4 927 240 86 0 0 chrX 44867281 44867316 -121782980 + (TGG)n Simple_repeat Simple_repeat 1 35 0 4 927 13862 183 133 10 chrX 44867316 44868147 -121782149 - Lx6 LINE L1 -3810 2067 1231 4 927 262 144 55 34 chrX 44868155 44868240 -121782056 + L1_Mur3 LINE L1 1981 2067 -3813 4 927 1184 207 69 20 chrX 44868302 44868688 -121781608 - Lx6 LINE L1 -5860 1226 888 4 927 22 0 0 0 chrX 44869082 44869104 -121781192 + AT_rich Low_complexity Low_complexity 1 22 0 4 927 207 0 0 0 chrX 44870666 44870689 -121779607 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 4 927 495 206 0 0 chrX 44870818 44870993 -121779303 + GA-rich Low_complexity Low_complexity 2 176 0 4 927 434 287 107 0 chrX 44871734 44871856 -121778440 + B1F SINE Alu 15 149 0 4 927 564 253 47 52 chrX 44872225 44872458 -121777838 + L1_Mur3 LINE L1 124 355 -7373 4 927 10550 165 57 32 chrX 44872461 44873592 -121776704 + L1_Mur3 LINE L1 2021 3169 -2711 4 927 6597 42 0 0 chrX 44873592 44874397 -121775899 + L1Md_A LINE L1 5776 6580 -2 4 927 10550 165 57 32 chrX 44874397 44875599 -121774697 + L1_Mur3 LINE L1 3170 4413 -1467 4 927 2216 136 39 36 chrX 44875602 44875991 -121774305 + ORR1B1 LTR MaLR 3 392 -2 4 927 362 182 261 0 chrX 44875992 44876080 -121774216 + Lx6 LINE L1 6860 6970 -490 4 927 362 308 150 20 chrX 44876265 44876822 -121773474 + L1M5 LINE L1 5220 5853 -311 4 927 7538 31 0 0 chrX 44876972 44878066 -121772230 - L1Md_F2 LINE L1 -502 6080 4987 4 927 8876 11 0 0 chrX 44878068 44879161 -121771135 - L1Md_T LINE L1 0 6582 5490 4 927 2334 60 0 3 chrX 44879159 44879459 -121770837 - L1Md_F2 LINE L1 -880 5003 4705 4 927 3976 59 4 0 chrX 44879459 44879968 -121770328 + L1Md_F2 LINE L1 6070 6580 -2 4 927 2075 208 18 41 chrX 44880139 44880236 -121770060 + RLTR17 LTR ERVK 266 365 -327 4 927 3431 88 39 0 chrX 44880236 44880722 -121769574 - L1_Mus3 LINE L1 -3 6635 6131 4 927 2075 208 18 41 chrX 44880722 44881061 -121769235 + RLTR17 LTR ERVK 366 692 0 4 927 4424 124 12 16 chrX 44881197 44882300 -121767996 + Lx2 LINE L1 5110 6214 -783 4 927 270 356 59 10 chrX 44882748 44882850 -121767446 - MLT1H2 LTR MaLR -304 185 79 4 927 248 178 0 14 chrX 44883185 44883259 -121767037 + GA-rich Low_complexity Low_complexity 1 73 0 4 927 743 219 23 37 chrX 44883498 44883716 -121766580 + RCHARR1 DNA MER1_type 720 934 -40 4 927 457 315 35 7 chrX 44883735 44883879 -121766417 + RSINE1 SINE B4 18 165 0 4 927 350 255 57 38 chrX 44884368 44884474 -121765822 + MIR3 SINE MIR 86 193 -15 4 927 800 245 51 5 chrX 44884711 44884908 -121765388 - MTD LTR MaLR 0 419 214 4 927 225 274 0 19 chrX 44885283 44885335 -121764961 + L2c LINE L2 3318 3368 -19 4 927 683 309 5 35 chrX 44885852 44886053 -121764243 + B3 SINE B2 13 207 -9 4 927 3479 200 55 28 chrX 44886164 44887079 -121763217 - RMER13A LTR ERVK 0 908 6 4 927 1276 326 50 46 chrX 44887432 44888085 -121762211 + Lx9 LINE L1 6815 7470 -174 4 927 402 57 0 0 chrX 44888102 44888155 -121762141 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 927 795 211 116 0 chrX 44888312 44888511 -121761785 + Lx9 LINE L1 7237 7458 -186 4 927 1770 291 69 26 chrX 44888534 44889102 -121761194 - MTE-int LTR MaLR -627 953 362 4 927 381 238 72 31 chrX 44889124 44889319 -121760977 - Lx7 LINE L1 -3 7693 7491 4 927 353 307 70 0 chrX 44889366 44889480 -121760816 - MTE-int LTR MaLR -1226 354 233 4 927 503 176 29 0 chrX 44889498 44889600 -121760696 + L1_Mur3 LINE L1 4801 4905 -975 4 927 1161 69 0 0 chrX 44889650 44889795 -121760501 - B1_Mm SINE Alu -2 145 1 5 927 2989 252 56 45 chrX 44889798 44890945 -121759351 + Lx9 LINE L1 2971 4129 -1718 5 927 444 198 0 102 chrX 44890945 44890961 -121759335 + MT2B LTR ERVL 152 155 -446 5 927 802 48 0 0 chrX 44890961 44891065 -121759231 + B1_Mm SINE Alu 1 104 -43 5 927 366 251 99 39 chrX 44891072 44891254 -121759042 + Lx9 LINE L1 4158 4350 -1497 5 927 512 240 209 16 chrX 44891274 44891456 -121758840 + Lx9 LINE L1 4643 4859 -988 5 927 1255 211 74 20 chrX 44891872 44892225 -121758071 + Lx9 LINE L1 4856 5227 -620 5 927 384 227 27 114 chrX 44892253 44892289 -121758007 + MT2B LTR ERVL 129 151 -450 5 927 967 83 0 0 chrX 44892289 44892421 -121757875 + B1_Mus1 SINE Alu 1 132 -16 5 927 1859 258 99 30 chrX 44892446 44893267 -121757029 + Lx9 LINE L1 5272 6181 -1292 5 927 270 116 0 0 chrX 44893267 44893310 -121756986 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 927 252 0 0 0 chrX 44893313 44893341 -121756955 + (GA)n Simple_repeat Simple_repeat 1 28 0 5 927 2175 274 38 20 chrX 44893341 44893999 -121756297 + Lx9 LINE L1 6182 6981 -663 5 927 204 295 16 16 chrX 44894979 44895041 -121755255 + MIRm SINE MIR 209 270 -6 5 927 1056 71 19 0 chrX 44896461 44896615 -121753681 + L1_Mus2 LINE L1 6410 6566 0 5 927 6422 88 4 42 chrX 44896620 44898069 -121752227 + L1VL1 LINE L1 193 1586 -2112 5 927 15987 81 23 44 chrX 44898096 44899404 -121750892 + L1_Mus1 LINE L1 3439 4778 -1789 5 927 286 214 0 79 chrX 44899404 44899480 -121750816 + MT2B LTR ERVL 195 264 -337 5 927 805 40 0 0 chrX 44899414 44899515 -121750781 + B1_Mm SINE Alu 47 147 0 5 927 243 219 92 134 chrX 44899415 44899557 -121750739 + B4A SINE B4 133 268 -24 5 927 15987 81 23 44 chrX 44899557 44901302 -121748994 + L1_Mus1 LINE L1 4779 6567 0 5 927 330 398 0 0 chrX 44901310 44901423 -121748873 + MER5A DNA MER1_type 61 173 -16 5 927 455 147 0 0 chrX 44901915 44901983 -121748313 + B2_Mm2 SINE B2 2 69 -126 5 927 405 191 0 25 chrX 44902019 44902110 -121748186 - B2_Mm2 SINE B2 -59 134 51 5 927 1768 191 27 11 chrX 44902135 44902480 -121747816 + L1_Mur2 LINE L1 4950 5297 -580 5 927 1800 112 7 14 chrX 44902480 44902769 -121747527 + Lx LINE L1 6368 6654 0 5 927 1768 191 27 11 chrX 44902769 44902794 -121747502 + L1_Mur2 LINE L1 5298 5325 -552 5 927 240 276 53 0 chrX 44903097 44903173 -121747123 - Lx7 LINE L1 -17 7679 7600 5 927 811 238 108 39 chrX 44903219 44903258 -121747038 - Lx7 LINE L1 -329 7367 7324 5 927 987 123 0 0 chrX 44903258 44903412 -121746884 + (GAA)n Simple_repeat Simple_repeat 3 156 0 5 927 811 238 108 39 chrX 44903412 44903604 -121746692 - Lx7 LINE L1 -373 7323 7120 5 927 7661 158 34 8 chrX 44903611 44904739 -121745557 + Lx5 LINE L1 5342 6505 -545 5 927 4819 128 81 74 chrX 44904739 44905690 -121744606 - RMER17B LTR ERVK 0 958 1 5 927 7661 177 35 15 chrX 44905690 44906220 -121744076 + Lx5 LINE L1 6506 7049 -1 5 927 344 339 46 33 chrX 44906613 44906854 -121743442 - Charlie24 DNA MER1_type -2026 424 181 5 927 953 302 43 37 chrX 44906961 44907741 -121742555 + L1MA7 LINE L1 5087 5936 -364 5 927 293 353 51 29 chrX 44907944 44907973 -121742323 - ID_B1 SINE B4 -2 222 84 5 927 296 317 84 56 chrX 44907973 44908080 -121742216 - B1F SINE Alu -37 112 3 5 927 328 397 43 65 chrX 44908633 44908819 -121741477 + MER115 DNA Tip100 196 377 -316 5 927 573 88 0 0 chrX 44909105 44909185 -121741111 + (TC)n Simple_repeat Simple_repeat 1 80 0 5 927 502 349 101 35 chrX 44909240 44909498 -121740798 - B4 SINE B4 -13 279 5 5 927 364 296 158 27 chrX 44909807 44910071 -121740225 + L1MC5 LINE L1 6673 6967 -915 5 927 362 247 26 0 chrX 44910095 44910172 -121740124 - ID4 SINE ID -3 80 2 5 927 254 384 87 33 chrX 44910578 44910877 -121739419 + L3 LINE CR1 3998 4312 -177 5 927 610 266 24 29 chrX 44912602 44912801 -121737495 + MER5A1 DNA MER1_type 3 178 0 5 927 886 286 0 13 chrX 44912922 44913156 -121737140 + Lx8 LINE L1 6311 6541 -932 5 927 865 284 165 13 chrX 44913415 44913790 -121736506 + Lx8 LINE L1 6529 6960 -513 5 927 513 344 69 30 chrX 44913804 44914109 -121736187 + Lx8 LINE L1 7014 7332 -141 5 927 432 0 0 0 chrX 44914109 44914157 -121736139 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 927 513 344 69 30 chrX 44914157 44914286 -121736010 + Lx8 LINE L1 7333 7465 -8 5 927 261 355 33 11 chrX 44914512 44914603 -121735693 - MLT1J LTR MaLR -337 175 83 5 927 1117 92 17 6 chrX 44914616 44914790 -121735506 - BGLII LTR ERVK 0 421 246 5 927 561 55 0 0 chrX 44914958 44915031 -121735265 + (GGAAA)n Simple_repeat Simple_repeat 5 77 0 5 927 1526 117 4 4 chrX 44915031 44915272 -121735024 + BGLII LTR ERVK 168 408 -13 5 927 200 310 52 0 chrX 44915354 44915412 -121734884 - L2 LINE L2 -712 2707 2647 5 927 268 363 39 40 chrX 44915577 44915783 -121734513 + MIRb SINE MIR 46 260 -8 5 927 351 325 17 42 chrX 44916606 44916725 -121733571 + B1F1 SINE Alu 27 142 -7 5 927 1287 20 0 0 chrX 44917814 44917964 -121732332 + (GAAA)n Simple_repeat Simple_repeat 3 152 0 5 927 279 149 0 0 chrX 44918443 44918490 -121731806 + Lx8 LINE L1 7416 7462 -11 5 927 300 194 0 16 chrX 44919082 44919145 -121731151 - Lx8 LINE L1 -453 7020 6959 5 927 312 302 80 43 chrX 44919284 44919471 -121730825 - RMER4A LTR ERVK -253 213 20 5 927 877 332 70 10 chrX 44919667 44920065 -121730231 + Lx8 LINE L1 7046 7467 -6 5 927 417 302 60 0 chrX 44920093 44920209 -121730087 - RSINE1 SINE B4 -41 124 2 5 927 288 309 159 47 chrX 44920384 44920554 -121729742 + LTR79 LTR ERVL 339 527 0 5 927 1000 289 16 8 chrX 44921014 44921269 -121729027 - MLT1F2 LTR MaLR -4 556 300 5 927 541 301 30 26 chrX 44921271 44921465 -121728831 + MTEa LTR MaLR 1 190 -184 5 927 260 85 43 0 chrX 44921475 44921522 -121728774 + (TCTCTG)n Simple_repeat Simple_repeat 2 50 0 5 927 638 232 51 34 chrX 44921564 44921742 -121728554 + MTEa LTR MaLR 199 379 0 5 927 542 262 160 40 chrX 44921773 44922023 -121728273 - MLT1F2 LTR MaLR -278 282 3 5 927 479 307 22 0 chrX 44923210 44923347 -121726949 + B1F1 SINE Alu 1 140 -9 5 927 282 261 52 0 chrX 44924327 44924442 -121725854 + L1M LINE L1 5299 5419 -761 5 927 1414 129 10 0 chrX 44924456 44924658 -121725638 + Lx4A LINE L1 6717 6920 -138 5 927 8986 158 95 33 chrX 44924654 44924904 -121725392 - L1_Mur3 LINE L1 -1775 4105 3855 5 927 180 0 0 0 chrX 44924904 44924924 -121725372 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 5 927 8986 158 95 33 chrX 44924924 44925023 -121725273 - L1_Mur3 LINE L1 -2026 3854 3746 5 927 5411 48 0 12 chrX 44925023 44925700 -121724596 - L1Md_F2 LINE L1 0 6582 5914 5 927 8986 158 95 33 chrX 44925700 44926898 -121723398 - L1_Mur3 LINE L1 -2135 3745 2423 5 927 640 238 211 17 chrX 44926898 44927073 -121723223 + B3 SINE B2 3 211 -5 5 927 8986 158 95 33 chrX 44927073 44927487 -121722809 - L1_Mur3 LINE L1 -3458 2422 2023 5 927 1416 306 12 12 chrX 44927493 44928003 -121722293 - L1_Mur3 LINE L1 -7131 597 88 5 927 479 309 127 4 chrX 44928022 44928259 -121722037 + L2 LINE L2 2560 2825 -594 5 927 369 347 45 40 chrX 44928306 44928504 -121721792 + MIR SINE MIR 31 229 -33 5 927 213 371 132 63 chrX 44928521 44928711 -121721585 + L2 LINE L2 2821 3023 -396 5 927 887 266 5 34 chrX 44928732 44928938 -121721358 + B3 SINE B2 6 205 -11 5 927 291 28 0 0 chrX 44928997 44929033 -121721263 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 927 636 311 97 18 chrX 44929331 44929662 -121720634 + Lx8 LINE L1 7115 7471 -2 5 927 1423 275 60 13 chrX 44930686 44931084 -121719212 + MTD LTR MaLR 1 417 -2 5 927 6573 171 42 11 chrX 44931566 44932857 -121717439 - Lx9 LINE L1 -8 7636 6306 5 927 4195 189 75 64 chrX 44932935 44933986 -121716310 - Lx9 LINE L1 -1615 6029 4954 5 927 2989 81 2 12 chrX 44933986 44934401 -121715895 - L1Md_F2 LINE L1 -12 6570 6160 5 927 4195 184 84 71 chrX 44934401 44934627 -121715669 - Lx9 LINE L1 -894 4953 4706 5 927 2634 31 3 3 chrX 44934823 44935135 -121715161 + L1Md_F2 LINE L1 6254 6566 -16 5 927 477 0 0 0 chrX 44935135 44935188 -121715108 + (TAA)n Simple_repeat Simple_repeat 2 54 0 5 927 2397 60 138 0 chrX 44935196 44935581 -121714715 + RLTR47_MM LTR ERV1 9 446 -86 5 927 543 276 72 19 chrX 44938136 44938343 -121711953 - MER20 DNA MER1_type 0 219 2 5 927 396 0 0 0 chrX 44938874 44938918 -121711378 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 927 394 203 14 0 chrX 44938920 44938994 -121711302 - RMER6A LTR ERVK -1 755 681 5 927 379 69 389 0 chrX 44938993 44939065 -121711231 - RMER6A LTR ERVK -651 105 6 5 927 261 0 0 0 chrX 44939067 44939096 -121711200 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 927 23 54 0 0 chrX 44940521 44940558 -121709738 + AT_rich Low_complexity Low_complexity 1 37 0 5 927 234 323 75 45 chrX 44940750 44940883 -121709413 - MIRb SINE MIR -63 205 69 5 927 201 74 0 0 chrX 44941151 44941178 -121709118 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 927 1763 297 25 17 chrX 44941292 44941820 -121708476 + Lx8 LINE L1 6369 6900 -573 5 927 531 31 0 0 chrX 44941822 44941887 -121708409 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 927 226 235 0 0 chrX 44941933 44941984 -121708312 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 927 361 316 7 29 chrX 44942153 44942293 -121708003 + GA-rich Low_complexity Low_complexity 6 142 0 5 927 396 346 40 80 chrX 44942390 44942591 -121707705 + B4A SINE B4 84 276 -16 5 927 468 0 0 0 chrX 44942615 44942667 -121707629 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 927 833 281 182 0 chrX 44942804 44943078 -121707218 - Tigger9b DNA MER2_type -299 325 2 5 927 241 291 165 42 chrX 44943510 44943641 -121706655 - L1MD2 LINE L1 -6272 275 117 5 927 198 0 0 0 chrX 44943641 44943663 -121706633 + (TAAAA)n Simple_repeat Simple_repeat 1 22 0 5 927 378 291 165 42 chrX 44943663 44943743 -121706553 - L1MD2 LINE L1 -6431 116 38 5 927 393 344 24 8 chrX 44943851 44943977 -121706319 + MER2B DNA MER2_type 1 128 -208 5 927 647 314 96 0 chrX 44944142 44944371 -121705925 + MER2 DNA MER2_type 89 339 -6 5 927 417 360 131 59 chrX 44944455 44944983 -121705313 - L1MD2 LINE L1 -5940 607 42 5 927 444 200 0 0 chrX 44945317 44945412 -121704884 + (CA)n Simple_repeat Simple_repeat 1 95 0 5 927 198 286 79 0 chrX 44945423 44945486 -121704810 - L2c LINE L2 -35 3352 3285 5 927 1310 98 22 0 chrX 44945959 44946142 -121704154 - B2_Mm2 SINE B2 -8 187 1 5 927 230 188 167 0 chrX 44946473 44946521 -121703775 + ID4_ SINE ID 8 63 -20 5 927 289 335 96 73 chrX 44946773 44946950 -121703346 - L3 LINE CR1 -375 4114 3934 5 927 287 331 101 14 chrX 44946973 44947111 -121703185 - MER5B DNA MER1_type -6 172 23 5 927 180 296 19 0 chrX 44947306 44947360 -121702936 - L3 LINE CR1 -1075 3414 3360 5 927 1256 265 156 6 chrX 44947405 44947758 -121702538 - MTD LTR MaLR -13 406 1 5 927 253 239 14 14 chrX 44949340 44949412 -121700884 + (CATA)n Simple_repeat Simple_repeat 3 74 0 5 927 284 265 67 87 chrX 44949467 44949616 -121700680 + MIRc SINE MIR 14 159 -109 5 927 1569 141 89 33 chrX 44949977 44950394 -121699902 - RMER17C LTR ERVK -519 439 16 6 927 470 299 57 36 chrX 44950504 44950698 -121699598 - B3A SINE B2 0 198 1 6 927 4058 61 0 4 chrX 44951315 44951826 -121698470 + L1Md_F2 LINE L1 6070 6578 -4 6 927 386 301 96 61 chrX 44951965 44952042 -121698254 - MIR SINE MIR -5 257 179 6 927 1045 264 97 46 chrX 44952042 44952391 -121697905 + ORR1D2 LTR MaLR 1 367 -3 6 927 386 301 96 61 chrX 44952391 44952511 -121697785 - MIR SINE MIR -84 178 53 6 927 614 237 56 49 chrX 44952936 44953078 -121697218 + B3A SINE B2 1 143 -55 6 927 446 351 52 6 chrX 44953342 44953514 -121696782 - MIRc SINE MIR -79 189 10 6 927 262 328 62 11 chrX 44954609 44954691 -121695605 + L1MD2 LINE L1 37 123 -6424 6 927 378 0 0 0 chrX 44954691 44954733 -121695563 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 6 927 262 328 62 11 chrX 44954733 44954826 -121695470 + L1MD2 LINE L1 124 221 -6326 6 927 225 95 24 0 chrX 44954873 44954915 -121695381 + Lx5 LINE L1 7005 7047 -3 6 927 390 358 92 15 chrX 44955316 44955539 -121694757 + L1MD2 LINE L1 773 1020 -5527 6 927 441 0 0 0 chrX 44955539 44955588 -121694708 + (TA)n Simple_repeat Simple_repeat 1 49 0 6 927 390 358 92 15 chrX 44955588 44955636 -121694660 + L1MD2 LINE L1 1021 1065 -5482 6 927 364 289 51 28 chrX 44955880 44956094 -121694202 + L1MD2 LINE L1 1715 1933 -4707 6 927 399 271 62 33 chrX 44956119 44956363 -121693933 + L1MCa LINE L1 1265 1515 -4993 6 927 310 379 24 62 chrX 44956695 44956906 -121693390 + LTR88c LTR Genie? 585 787 -75 6 927 770 224 11 85 chrX 44957283 44957429 -121692867 + RSINE1 SINE B4 3 143 -22 6 927 342 0 0 0 chrX 44957429 44957467 -121692829 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 927 770 224 11 85 chrX 44957467 44957496 -121692800 + RSINE1 SINE B4 144 165 0 6 927 22 0 0 0 chrX 44957502 44957524 -121692772 + AT_rich Low_complexity Low_complexity 1 22 0 6 927 291 177 5 158 chrX 44957561 44957657 -121692639 - PB1D10 SINE Alu -8 112 29 6 928 266 339 46 37 chrX 44958492 44958631 -121691665 + MIRc SINE MIR 43 183 -93 6 928 185 230 109 47 chrX 44959161 44959225 -121691071 + L3 LINE CR1 3068 3135 -1354 6 928 662 304 114 0 chrX 44960481 44960754 -121689542 + MER46C DNA MER2_type 2 305 -33 6 928 270 164 0 0 chrX 44961185 44961240 -121689056 + A-rich Low_complexity Low_complexity 1 55 0 6 928 198 0 0 0 chrX 44961480 44961502 -121688794 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 6 928 204 231 0 37 chrX 44961549 44961603 -121688693 + (TTTA)n Simple_repeat Simple_repeat 4 55 0 6 928 236 238 49 24 chrX 44962172 44962254 -121688042 + ORR1D1 LTR MaLR 2 85 -289 6 928 381 43 0 0 chrX 44962430 44962477 -121687819 + (CATA)n Simple_repeat Simple_repeat 4 50 0 6 928 353 279 0 98 chrX 44962977 44963100 -121687196 - MLT1A1 LTR MaLR -3 405 295 6 928 1867 166 93 33 chrX 44963349 44963983 -121686313 - RMER17A2 LTR ERVK 0 958 1 6 928 3162 58 0 0 chrX 44964083 44964499 -121685797 - L1_Mm LINE L1 -745 5138 4723 6 928 5654 77 3 7 chrX 44964499 44965253 -121685043 + L1Md_F2 LINE L1 5832 6582 0 6 928 410 366 67 29 chrX 44966085 44966397 -121683899 + L4 LINE RTE 1429 1752 -277 6 928 290 333 54 9 chrX 44966405 44966517 -121683779 + MER5B DNA MER1_type 2 118 -60 6 928 255 357 0 0 chrX 44966612 44966682 -121683614 + L4 LINE RTE 1755 1824 -205 6 928 219 273 149 70 chrX 44966872 44967073 -121683223 + L2a LINE L2 2427 2643 -776 6 928 22 35 0 0 chrX 44967073 44967102 -121683194 + AT_rich Low_complexity Low_complexity 1 29 0 6 928 202 213 65 16 chrX 44967537 44967599 -121682697 + L2a LINE L2 2744 2808 -611 6 928 496 268 28 42 chrX 44967630 44967774 -121682522 - B1F1 SINE Alu -7 142 1 6 928 264 361 89 19 chrX 44967779 44967993 -121682303 + L2a LINE L2 2792 3024 -395 6 928 3449 28 2 0 chrX 44967993 44968388 -121681908 + MTA_Mm LTR MaLR 1 396 0 6 928 264 368 78 19 chrX 44968388 44968536 -121681760 + L2a LINE L2 3023 3171 -204 6 928 460 73 0 24 chrX 44968537 44968621 -121681675 + (TTTTTG)n Simple_repeat Simple_repeat 3 84 0 6 928 364 304 26 51 chrX 44968697 44968853 -121681443 + L2a LINE L2 3275 3426 0 6 928 223 240 0 0 chrX 44968935 44968985 -121681311 + L3 LINE CR1 4435 4484 -5 6 928 259 321 37 9 chrX 44968993 44969100 -121681196 - MIRc SINE MIR -9 259 150 6 928 248 287 91 11 chrX 44969134 44969222 -121681074 + ID_B1 SINE B4 125 219 -5 6 928 638 289 0 0 chrX 44969227 44969355 -121680941 + RSINE1 SINE B4 4 131 -34 6 928 612 40 0 0 chrX 44969361 44969436 -121680860 + (GA)n Simple_repeat Simple_repeat 2 76 0 6 928 405 0 0 0 chrX 44971248 44971293 -121679003 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 928 538 332 126 0 chrX 44971650 44971840 -121678456 + LTR85a LTR Gypsy? 456 669 -33 6 928 1236 193 61 6 chrX 44972813 44973141 -121677155 - Lx9 LINE L1 -29 7615 7270 6 928 976 163 5 0 chrX 44973186 44973389 -121676907 - Lx3C LINE L1 -863 6113 5910 6 928 2777 190 57 20 chrX 44973393 44974154 -121676142 + Lx3C LINE L1 6167 6974 -7 6 928 206 81 27 0 chrX 44974155 44974192 -121676104 + (TAAAAA)n Simple_repeat Simple_repeat 5 42 0 6 928 1572 199 142 8 chrX 44974205 44974795 -121675501 + Lx9 LINE L1 6312 6980 -664 6 928 590 182 124 0 chrX 44974795 44974932 -121675364 - MTC LTR MaLR 0 421 268 6 928 858 28 0 0 chrX 44974916 44975023 -121675273 + B1_Mus2 SINE Alu 40 146 -1 6 928 1465 140 0 31 chrX 44975035 44975264 -121675032 - MTC LTR MaLR -130 291 70 6 928 405 127 0 0 chrX 44975265 44975344 -121674952 + (T)n Simple_repeat Simple_repeat 1 79 0 6 928 843 119 8 0 chrX 44975344 44975470 -121674826 - B1_Mus1 SINE Alu -21 127 1 6 928 431 147 30 174 chrX 44975470 44975505 -121674791 - MTC LTR MaLR -344 77 54 6 928 1196 115 5 0 chrX 44975505 44975697 -121674599 + Lx LINE L1 6457 6649 -5 6 928 431 147 30 174 chrX 44975697 44975754 -121674542 - MTC LTR MaLR -368 53 4 6 928 1128 181 24 91 chrX 44975754 44976051 -121674245 + Lx9 LINE L1 6978 7254 -390 6 928 227 291 109 92 chrX 44976117 44976291 -121674005 - MER5B DNA MER1_type 0 178 2 6 928 25 0 0 0 chrX 44976789 44976814 -121673482 + AT_rich Low_complexity Low_complexity 1 25 0 6 928 582 226 44 15 chrX 44976823 44976958 -121673338 - RSINE1 SINE B4 -12 153 15 6 928 1054 265 108 61 chrX 44976966 44977074 -121673222 - MTEb LTR MaLR 0 379 278 6 928 3012 83 5 0 chrX 44977074 44977472 -121672824 + MTB LTR MaLR 1 400 0 6 928 1054 265 108 61 chrX 44977472 44977725 -121672571 - MTEb LTR MaLR -102 277 1 6 928 201 234 0 0 chrX 44977826 44977873 -121672423 + CT-rich Low_complexity Low_complexity 2 48 0 6 928 180 0 0 0 chrX 44977887 44977907 -121672389 + (CATA)n Simple_repeat Simple_repeat 4 23 0 6 928 438 291 156 41 chrX 44978018 44978767 -121671529 - L1MC4 LINE L1 -114 7928 7094 6 928 7046 181 24 7 chrX 44979454 44980743 -121669553 - Lx5 LINE L1 -3 7047 5737 6 928 739 200 21 0 chrX 44980879 44981024 -121669272 + B1_Mus1 SINE Alu 1 148 0 6 928 239 228 16 81 chrX 44981043 44981105 -121669191 + tRNA-Ala-GCA tRNA tRNA 2 59 -16 6 928 335 329 80 7 chrX 44981110 44981248 -121669048 + HAL1-3A_ME LINE L1 2292 2439 -419 6 928 2486 145 23 0 chrX 44981678 44982105 -121668191 - L1_Mur3 LINE L1 -129 5748 5312 6 928 17458 93 5 13 chrX 44982103 44985562 -121664734 + L1_Mus1 LINE L1 3139 6566 -1 6 928 26 0 0 0 chrX 44985562 44985588 -121664708 + AT_rich Low_complexity Low_complexity 1 26 0 6 928 245 130 22 0 chrX 44985593 44985639 -121664657 - L1_Mur3 LINE L1 -548 5329 5283 6 928 1826 78 0 30 chrX 44985674 44985937 -121664359 - L1Md_F2 LINE L1 -12 6570 6316 6 928 4432 156 41 20 chrX 44985937 44985987 -121664309 - L1_Mur3 LINE L1 -581 5296 5227 6 928 1075 84 11 0 chrX 44985987 44986165 -121664131 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 6 928 3480 15 5 0 chrX 44986168 44986562 -121663734 - MTA_Mm LTR MaLR 0 396 1 6 928 8988 41 4 1 chrX 44986562 44987657 -121662639 - MTA_Mm-int LTR MaLR 0 1098 1 6 928 3471 15 5 0 chrX 44987657 44988050 -121662246 - MTA_Mm LTR MaLR 0 396 2 6 928 491 92 0 11 chrX 44988050 44988138 -121662158 + (TAGA)n Simple_repeat Simple_repeat 2 88 0 6 928 4432 156 41 20 chrX 44988138 44988734 -121661562 - L1_Mur3 LINE L1 -651 5226 4635 6 928 216 0 0 0 chrX 44988734 44988758 -121661538 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 928 4432 156 41 20 chrX 44988758 44988989 -121661307 - L1_Mur3 LINE L1 -1243 4634 4397 6 928 5549 186 36 22 chrX 44988987 44990072 -121660224 - L1_Mur3 LINE L1 -3311 2566 1468 6 928 1650 34 0 10 chrX 44990072 44990280 -121660016 - L1Md_T LINE L1 0 6582 6377 6 928 5549 195 59 22 chrX 44990280 44990798 -121659498 - L1_Mur3 LINE L1 -4410 1467 881 6 928 318 295 0 26 chrX 44991126 44991241 -121659055 + PB1D10 SINE Alu 1 112 -5 6 928 1026 171 118 10 chrX 44992918 44993079 -121657217 + B3 SINE B2 1 183 -33 6 928 414 0 0 0 chrX 44993079 44993125 -121657171 + (CATA)n Simple_repeat Simple_repeat 1 46 0 6 928 1026 171 118 10 chrX 44993125 44993158 -121657138 + B3 SINE B2 184 216 0 6 928 362 274 128 35 chrX 44994115 44994342 -121655954 - MER96B DNA hAT 0 417 170 6 928 2231 146 30 81 chrX 44994344 44994634 -121655662 - MTC LTR MaLR -11 410 115 6 928 616 100 69 8 chrX 44994634 44994765 -121655531 + L1Md_F2 LINE L1 6442 6580 -2 6 928 2231 146 30 81 chrX 44994765 44994845 -121655451 - MTC LTR MaLR -307 114 44 6 928 3689 34 4 20 chrX 44994845 44995302 -121654994 + L1Md_F2 LINE L1 6130 6579 -3 6 928 2231 146 30 81 chrX 44995302 44995362 -121654934 - MTC LTR MaLR -378 43 1 6 928 1615 162 18 14 chrX 44996016 44996298 -121653998 + Lx4A LINE L1 6772 7054 -4 6 928 23 54 0 0 chrX 44996446 44996483 -121653813 + AT_rich Low_complexity Low_complexity 1 37 0 6 928 207 114 0 0 chrX 44996504 44996539 -121653757 + (A)n Simple_repeat Simple_repeat 1 35 0 6 928 2284 61 234 0 chrX 44996681 44996882 -121653414 - BGLII_Mus LTR ERVK 0 422 191 6 928 564 15 0 0 chrX 44996882 44996947 -121653349 + (TC)n Simple_repeat Simple_repeat 1 65 0 6 928 2284 61 234 0 chrX 44996947 44997087 -121653209 - BGLII_Mus LTR ERVK -232 190 2 6 928 7307 68 10 0 chrX 44997699 44998843 -121651453 - L1_Mus2 LINE L1 -1 6565 5408 6 928 611 312 116 8 chrX 44998985 44999243 -121651053 + B4A SINE B4 1 286 -6 6 928 219 220 0 0 chrX 44999267 44999317 -121650979 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 928 482 288 73 0 chrX 44999395 44999586 -121650710 - MER3 DNA MER1_type -4 205 1 6 928 373 313 96 43 chrX 45000549 45000736 -121649560 - MER117 DNA MER1_type 0 197 1 1 928 211 323 57 57 chrX 45001537 45001678 -121648618 - L3 LINE CR1 -241 4248 4108 2 928 351 284 69 60 chrX 45001740 45001957 -121648339 + L1M2 LINE L1 3166 3384 -2759 3 928 665 295 79 23 chrX 45001968 45002522 -121647774 + L1M2 LINE L1 3411 4007 -2136 3 928 629 40 0 0 chrX 45002500 45002576 -121647720 - L1_Mus1 LINE L1 -673 5894 5819 4 928 3447 53 2 0 chrX 45002576 45003017 -121647279 + L1_Mus1 LINE L1 6139 6567 0 5 928 641 276 101 25 chrX 45003113 45003443 -121646853 + L1M2 LINE L1 4057 4394 -1749 3 928 261 0 0 0 chrX 45003443 45003472 -121646824 + (TAAAA)n Simple_repeat Simple_repeat 4 32 0 6 928 641 276 101 25 chrX 45003472 45003579 -121646717 + L1M2 LINE L1 4395 4526 -1617 3 928 867 296 4 8 chrX 45004595 45004850 -121645446 + Lx9 LINE L1 7068 7321 -323 7 928 407 369 25 0 chrX 45004855 45005012 -121645284 - MTEa LTR MaLR -216 163 3 8 928 405 318 14 27 chrX 45005014 45005234 -121645062 - L1M2 LINE L1 -582 5709 5493 9 928 304 275 140 0 chrX 45005754 45005947 -121644349 - L1M2 LINE L1 -754 5389 5170 9 928 256 236 21 41 chrX 45005976 45006073 -121644223 + (TATATG)n Simple_repeat Simple_repeat 4 98 0 1 928 1193 308 10 24 chrX 45006074 45006098 -121644198 - B4A SINE B4 0 292 271 1 928 477 0 0 0 chrX 45006098 45006151 -121644145 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 928 1193 308 10 24 chrX 45006151 45006422 -121643874 - B4A SINE B4 -22 270 1 1 928 615 251 146 50 chrX 45006686 45006925 -121643371 + RMER15 LTR ERVL 312 573 -2 1 928 230 395 11 45 chrX 45008204 45008422 -121641874 + MIR SINE MIR 1 207 -55 1 928 861 265 0 73 chrX 45008422 45008654 -121641642 + B3 SINE B2 2 216 0 1 928 230 380 10 54 chrX 45008654 45008704 -121641592 + MIR SINE MIR 208 251 -11 1 928 330 87 0 0 chrX 45008771 45008817 -121641479 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 928 285 333 87 64 chrX 45008915 45009181 -121641115 + B4 SINE B4 3 274 -18 1 928 220 273 43 57 chrX 45009376 45009446 -121640850 + ID_B1 SINE B4 84 152 -72 1 928 194 292 42 0 chrX 45009457 45009529 -121640767 + MIR SINE MIR 124 198 -64 1 928 379 298 11 0 chrX 45009543 45009637 -121640659 + B3 SINE B2 2 96 -120 2 928 285 146 0 0 chrX 45009636 45009684 -121640612 + ID_B1 SINE B4 177 224 0 2 928 225 284 21 10 chrX 45009732 45009828 -121640468 - L1MC4a LINE L1 -106 7776 7680 2 928 236 270 0 98 chrX 45010021 45010038 -121640258 - RMER15 LTR ERVL -99 476 464 2 928 360 0 0 0 chrX 45010038 45010078 -121640218 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 928 236 270 0 98 chrX 45010078 45010142 -121640154 - RMER15 LTR ERVL -112 463 403 2 928 860 300 165 42 chrX 45010145 45010923 -121639373 - Lx8 LINE L1 -210 7263 6391 2 928 468 0 0 0 chrX 45011131 45011183 -121639113 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 928 4521 192 38 29 chrX 45011549 45012087 -121638209 + RMER19B LTR ERVK 1 539 -363 2 928 3472 18 13 0 chrX 45012087 45012478 -121637818 + MTA_Mm LTR MaLR 1 396 0 2 928 4521 192 38 29 chrX 45012478 45012833 -121637463 + RMER19B LTR ERVK 540 902 0 2 928 317 222 135 27 chrX 45012840 45012951 -121637345 + B1F SINE Alu 22 144 -5 2 928 258 156 0 0 chrX 45012951 45012996 -121637300 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 3 928 6320 164 47 44 chrX 45014196 45015707 -121634589 + Lx4B LINE L1 5526 7038 -20 3 928 261 302 9 0 chrX 45015743 45015849 -121634447 + HAL1 LINE L1 1270 1376 -1131 3 928 3717 57 0 4 chrX 45015910 45016391 -121633905 + L1Md_F2 LINE L1 6105 6582 0 3 928 322 321 18 0 chrX 45016472 45016581 -121633715 - L1MC4 LINE L1 0 8042 7932 3 928 265 218 13 13 chrX 45017694 45017773 -121632523 + GA-rich Low_complexity Low_complexity 2 80 0 3 928 228 228 0 0 chrX 45017786 45017843 -121632453 + HAL1 LINE L1 2336 2392 -115 3 928 856 336 112 21 chrX 45017952 45018535 -121631761 + L1MDa LINE L1 48 683 -5950 3 928 424 326 135 31 chrX 45018568 45018894 -121631402 + L1MDa LINE L1 810 1169 -5464 3 928 2174 149 6 8 chrX 45019512 45019864 -121630432 - RMER6D LTR ERVK -369 351 1 3 928 480 301 60 20 chrX 45019874 45020227 -121630069 + L1MDa LINE L1 1316 1682 -4951 3 928 357 329 58 14 chrX 45020240 45020447 -121629849 + L1MDa LINE L1 1754 1969 -4664 3 928 332 317 22 94 chrX 45020447 45020482 -121629814 + B4 SINE B4 58 224 -67 3 928 369 226 0 97 chrX 45020471 45020482 -121629814 + MT2B LTR ERVL 157 158 -443 4 928 672 276 7 0 chrX 45020482 45020627 -121629669 + B1_Mur1 SINE Alu 3 148 -1 4 928 480 249 97 43 chrX 45020678 45021051 -121629245 + L1MDa LINE L1 1996 2388 -4245 3 928 1701 250 118 41 chrX 45021072 45022207 -121628089 + L1MDa LINE L1 2486 3706 -2831 3 928 514 281 0 0 chrX 45022209 45022362 -121627934 + Lx9 LINE L1 7284 7436 -208 4 928 926 161 69 6 chrX 45022475 45022650 -121627646 + B2_Mm2 SINE B2 1 186 -9 4 928 1418 295 86 15 chrX 45022890 45023495 -121626801 - Lx8 LINE L1 -194 7279 6632 4 928 362 248 88 0 chrX 45023534 45023659 -121626637 + L1MDa LINE L1 5087 5222 -1315 3 928 1017 25 0 0 chrX 45023661 45023781 -121626515 + (TC)n Simple_repeat Simple_repeat 1 120 0 4 928 360 0 0 0 chrX 45023781 45023820 -121626476 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 928 315 280 15 8 chrX 45023936 45024069 -121626227 + L1MDa LINE L1 5497 5630 -907 3 928 546 16 0 0 chrX 45024164 45024227 -121626069 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 928 23 54 0 0 chrX 45024827 45024864 -121625432 + AT_rich Low_complexity Low_complexity 1 37 0 4 928 8602 24 1 2 chrX 45024871 45025869 -121624427 + L1Md_F3 LINE L1 5588 6584 0 4 928 5986 100 7 5 chrX 45026170 45026182 -121624114 - Lx3_Mus LINE L1 -12 6997 6987 5 928 216 0 0 0 chrX 45026182 45026206 -121624090 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 5 928 5986 100 7 5 chrX 45026206 45027046 -121623250 - Lx3_Mus LINE L1 -23 6986 6143 5 928 9261 95 76 3 chrX 45027048 45028530 -121621766 - L1_Mur1 LINE L1 -283 5603 4014 5 928 2687 66 26 0 chrX 45028530 45028879 -121621417 + L1_Mus1 LINE L1 6201 6558 -9 5 928 27074 56 0 0 chrX 45028880 45029548 -121620748 + L1Md_F LINE L1 575 1241 -4642 5 928 7352 36 1 2 chrX 45029548 45030437 -121619859 + L1Md_A LINE L1 5694 6581 -1 5 928 27074 77 1 8 chrX 45030437 45034337 -121615959 + L1Md_F LINE L1 1242 5115 -768 5 928 226 224 0 33 chrX 45034332 45034392 -121615904 - Lx8 LINE L1 -329 7144 7087 5 928 782 273 11 10 chrX 45036064 45036280 -121614016 + B3A SINE B2 5 216 0 5 928 4714 127 53 28 chrX 45036649 45037575 -121612721 - L1_Mus3 LINE L1 -1 6637 5689 5 928 3750 79 22 0 chrX 45037601 45038105 -121612191 - L1_Mus1 LINE L1 0 6567 6053 5 928 235 61 0 0 chrX 45038106 45038139 -121612157 + L1VL1 LINE L1 745 777 -5645 6 928 222 37 0 0 chrX 45038144 45038171 -121612125 + (T)n Simple_repeat Simple_repeat 1 27 0 6 928 1144 82 0 0 chrX 45038176 45038322 -121611974 - B1_Mm SINE Alu -1 146 1 6 928 1007 126 55 0 chrX 45038335 45038517 -121611779 + L1_Mm LINE L1 4936 5127 -756 6 928 7699 69 1 8 chrX 45038519 45038618 -121611678 + L1_Mm LINE L1 3707 3805 -2078 6 928 1887 134 110 45 chrX 45038618 45039064 -121611232 - IAPLTR2_Mm LTR ERVK 0 475 1 6 928 7699 69 1 8 chrX 45039064 45040060 -121610236 + L1_Mm LINE L1 3806 4794 -1089 6 928 2115 97 7 0 chrX 45040060 45040370 -121609926 + L1_Mm LINE L1 5375 5686 -197 6 928 3330 195 17 16 chrX 45040913 45041399 -121608897 - Lx5 LINE L1 -766 6284 5798 6 928 278 19 17 69 chrX 45041399 45041457 -121608839 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 6 928 1126 37 8 0 chrX 45041457 45041591 -121608705 - B1_Mus2 SINE Alu -11 136 2 6 928 3330 163 4 21 chrX 45041591 45041978 -121608318 - Lx5 LINE L1 -1253 5797 5404 6 928 3188 180 64 14 chrX 45041980 45042672 -121607624 + Lx4B LINE L1 6323 7048 -10 6 928 869 228 142 25 chrX 45043234 45043473 -121606823 - MTD LTR MaLR -146 273 7 7 928 23 68 0 0 chrX 45043793 45043837 -121606459 + AT_rich Low_complexity Low_complexity 1 44 0 7 928 376 326 100 25 chrX 45044202 45044602 -121605694 - L1M5 LINE L1 -472 5701 5272 7 928 246 62 0 0 chrX 45044621 45044653 -121605643 + (TA)n Simple_repeat Simple_repeat 1 32 0 7 928 1250 190 38 4 chrX 45045065 45045303 -121604993 + MT2A LTR ERVL 3 248 -285 7 928 3853 204 35 30 chrX 45045312 45046241 -121604055 + RMER13A LTR ERVK 5 908 0 7 928 1333 192 7 15 chrX 45046241 45046511 -121603785 + MT2A LTR ERVL 255 522 -11 7 928 5357 104 35 4 chrX 45046642 45047436 -121602860 + Lx2 LINE L1 6175 6993 -4 7 928 357 348 0 0 chrX 45047588 45047700 -121602596 + PB1D10 SINE Alu 1 112 -5 7 928 396 0 0 0 chrX 45047906 45047950 -121602346 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 928 7133 155 27 2 chrX 45048290 45049554 -121600742 - Lx2B LINE L1 0 7000 5705 7 928 1250 35 0 0 chrX 45049808 45049953 -121600343 + B1_Mm SINE Alu 1 145 -2 8 928 414 85 0 0 chrX 45050122 45050181 -121600115 + (TGAA)n Simple_repeat Simple_repeat 1 59 0 8 928 9598 143 68 46 chrX 45051974 45052881 -121597415 + Lx5 LINE L1 3820 4731 -1146 8 928 3806 42 0 7 chrX 45052881 45053340 -121596956 + L1_Mus1 LINE L1 6109 6564 -3 8 928 9598 143 68 46 chrX 45053340 45053474 -121596822 + Lx5 LINE L1 4732 4865 -1012 8 928 1195 46 118 28 chrX 45053474 45053652 -121596644 - B2_Mm2 SINE B2 0 195 2 8 928 9598 166 68 32 chrX 45053652 45055461 -121594835 + Lx5 LINE L1 4866 6769 -281 8 928 533 233 19 45 chrX 45055456 45055613 -121594683 + Lx5 LINE L1 6897 7049 -1 8 928 426 287 8 30 chrX 45055794 45055901 -121594395 + B4 SINE B4 162 269 -23 8 928 378 0 0 0 chrX 45055901 45055943 -121594353 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 928 426 287 8 30 chrX 45055943 45055968 -121594328 + B4 SINE B4 270 291 -1 8 928 250 26 51 0 chrX 45056102 45056141 -121594155 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 8 928 333 0 0 0 chrX 45056330 45056367 -121593929 + (CCCTA)n Simple_repeat Simple_repeat 2 38 0 8 928 269 291 24 19 chrX 45056631 45056759 -121593537 + GA-rich Low_complexity Low_complexity 1 128 0 8 928 25 31 0 0 chrX 45056970 45057002 -121593294 + AT_rich Low_complexity Low_complexity 1 32 0 9 928 831 303 92 52 chrX 45057653 45058053 -121592243 - LTR40b LTR ERVL -6 456 41 9 928 215 268 0 18 chrX 45058726 45058783 -121591513 - MIR3 SINE MIR -51 157 102 9 928 243 397 44 16 chrX 45059792 45059974 -121590322 + L3 LINE CR1 3892 4078 -411 9 928 1038 231 60 55 chrX 45060080 45060515 -121589781 - L1MA9 LINE L1 -12 6300 5864 9 928 194 303 28 75 chrX 45060518 45060625 -121589671 + L3 LINE CR1 4222 4323 -166 9 928 1341 227 17 65 chrX 45060634 45060967 -121589329 - MTD LTR MaLR -15 404 102 9 928 489 245 181 47 chrX 45060971 45061142 -121589154 + B3 SINE B2 1 194 -22 9 928 397 195 13 13 chrX 45061146 45061224 -121589072 - MTD LTR MaLR -299 120 43 9 928 33 0 0 0 chrX 45061654 45061687 -121588609 + AT_rich Low_complexity Low_complexity 1 33 0 9 928 273 317 139 43 chrX 45062281 45062489 -121587807 - LTR81B LTR ERV1? -1107 286 59 9 928 792 191 212 6 chrX 45062538 45062717 -121587579 + B3 SINE B2 1 216 0 9 928 3216 166 58 119 chrX 45062752 45063639 -121586657 - Lx7 LINE L1 -30 7666 6835 1 928 308 44 44 0 chrX 45064101 45064146 -121586150 + (TATG)n Simple_repeat Simple_repeat 2 48 0 1 928 499 324 44 44 chrX 45064637 45064886 -121585410 + MIRb SINE MIR 5 253 -15 1 928 1322 156 95 0 chrX 45065001 45065296 -121585000 + Lx4B LINE L1 5858 6180 -878 1 928 1859 144 43 102 chrX 45065469 45065909 -121584387 - RMER1B Other Other -3 1063 650 1 928 336 311 65 89 chrX 45066131 45066523 -121583773 - ORR1D2 LTR MaLR 0 370 1 1 928 300 350 114 22 chrX 45066584 45066812 -121583484 + L2b LINE L2 3122 3370 -5 1 928 5909 91 108 6 chrX 45066991 45068006 -121582290 - L1_Mus4 LINE L1 -2 6634 5519 1 928 875 221 66 40 chrX 45068369 45068642 -121581654 - L1_Rod LINE L1 -6494 678 399 1 928 201 129 0 0 chrX 45068739 45068770 -121581526 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 1 928 293 244 2 52 chrX 45068827 45068964 -121581332 + Lx9 LINE L1 5462 5614 -677 1 928 2276 62 13 29 chrX 45068973 45069289 -121581007 + ORR1A2 LTR MaLR 9 319 -8 1 928 873 228 152 12 chrX 45069291 45069610 -121580686 + Lx9 LINE L1 5547 5968 -1676 1 928 40 59 0 0 chrX 45069992 45070060 -121580236 + AT_rich Low_complexity Low_complexity 1 68 0 1 928 31 26 0 0 chrX 45070515 45070553 -121579743 + AT_rich Low_complexity Low_complexity 1 38 0 1 928 361 228 238 0 chrX 45070560 45070661 -121579635 - B3 SINE B2 -3 213 89 1 928 914 175 91 47 chrX 45070661 45070816 -121579480 + RMER17C LTR ERVK 16 178 -232 1 928 906 69 0 0 chrX 45070816 45070947 -121579349 + (TC)n Simple_repeat Simple_repeat 2 132 0 1 928 914 134 58 30 chrX 45070947 45071141 -121579155 + RMER17C LTR ERVK 179 409 -1 1 928 398 225 38 0 chrX 45071141 45071221 -121579075 - B3A SINE B2 -105 93 11 1 928 29 28 0 0 chrX 45071596 45071632 -121578664 + AT_rich Low_complexity Low_complexity 1 36 0 1 928 336 179 0 35 chrX 45071712 45071799 -121578497 - L1M4 LINE L1 -3583 2563 2480 1 928 265 247 80 117 chrX 45071885 45072015 -121578281 + Lx7 LINE L1 7516 7647 -49 1 928 3053 33 0 0 chrX 45072015 45072378 -121577918 + L1Md_F2 LINE L1 6208 6570 -12 1 928 265 247 80 117 chrX 45072378 45072435 -121577861 + Lx7 LINE L1 7648 7696 0 1 928 282 231 67 0 chrX 45072588 45072692 -121577604 + Lx5 LINE L1 6940 7050 0 1 928 1193 294 68 10 chrX 45072729 45073217 -121577079 - ERVL-B4-int LTR ERVL -638 5076 4561 1 928 465 273 58 7 chrX 45073337 45073492 -121576804 - ERVL-B4-int LTR ERVL -2761 2953 2791 1 928 1005 302 40 19 chrX 45073745 45074248 -121576048 - L1MA4 LINE L1 -1546 5927 5450 1 928 761 22 0 0 chrX 45074275 45074365 -121575931 + L1Md_A LINE L1 5497 5586 -297 1 928 8372 34 2 0 chrX 45074365 45075357 -121574939 + L1Md_A LINE L1 5587 6580 -2 1 928 1526 283 32 39 chrX 45075371 45076017 -121574279 - ERVL-B4-int LTR ERVL -3437 2277 1636 1 928 3534 45 0 0 chrX 45076161 45076609 -121573687 + L1Md_A LINE L1 6080 6527 -55 1 928 1652 281 45 45 chrX 45077031 45077699 -121572597 - ERVL-B4-int LTR ERVL -4179 1535 868 1 928 5389 65 14 3 chrX 45078065 45078762 -121571534 - L1Md_F2 LINE L1 -10 6572 5868 1 928 1960 90 7 4 chrX 45079793 45080072 -121570224 - L1_Mus2 LINE L1 0 6566 6287 1 928 25 65 0 0 chrX 45080514 45080560 -121569736 + AT_rich Low_complexity Low_complexity 1 46 0 1 928 1590 278 73 40 chrX 45080609 45081241 -121569055 - ERVL-B4-int LTR ERVL -4850 864 212 1 928 1226 106 0 1 chrX 45081244 45081434 -121568862 - Lx3_Mus LINE L1 -857 5725 5541 1 928 9004 76 19 5 chrX 45081433 45081645 -121568651 + Lx3_Mus LINE L1 5704 5924 -1085 1 928 240 35 0 0 chrX 45081645 45081674 -121568622 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1 928 9004 76 19 5 chrX 45081674 45082750 -121567546 + Lx3_Mus LINE L1 5925 7009 0 1 928 25 0 0 0 chrX 45082750 45082775 -121567521 + AT_rich Low_complexity Low_complexity 1 25 0 1 928 4251 153 38 8 chrX 45082793 45083532 -121566764 + Lx3C LINE L1 6205 6965 -11 1 928 498 264 13 13 chrX 45083546 45083696 -121566600 - ERVL-B4-int LTR ERVL -5515 199 50 1 928 1756 132 164 9 chrX 45083701 45084037 -121566259 + ORR1B1 LTR MaLR 1 388 -6 1 928 198 0 0 0 chrX 45084529 45084551 -121565745 + (CAAT)n Simple_repeat Simple_repeat 3 24 0 1 928 222 176 0 0 chrX 45084558 45084609 -121565687 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 1 928 262 361 0 0 chrX 45084883 45084966 -121565330 + ID4 SINE ID 1 83 0 1 928 1040 323 88 23 chrX 45085626 45086010 -121564286 - MLT2B1 LTR ERVL -111 409 1 1 928 192 77 0 0 chrX 45086111 45086137 -121564159 + (TATG)n Simple_repeat Simple_repeat 3 28 0 1 928 544 231 107 0 chrX 45086138 45086259 -121564037 - RSINE1 SINE B4 -31 134 1 1 928 207 286 29 48 chrX 45086372 45086475 -121563821 + MIRc SINE MIR 165 265 -3 1 928 211 289 120 32 chrX 45086767 45086892 -121563404 + MIRc SINE MIR 91 226 -42 1 928 589 288 33 14 chrX 45087481 45087696 -121562600 + LTR55 LTR ERV 1 219 -329 1 928 922 297 19 4 chrX 45087739 45087992 -121562304 + B4A SINE B4 5 261 -31 1 928 2896 54 0 3 chrX 45087997 45088371 -121561925 + L1_Mus2 LINE L1 6090 6462 -104 1 928 270 274 6 58 chrX 45088409 45088506 -121561790 - MTEb LTR MaLR -200 179 84 1 928 811 198 18 32 chrX 45088530 45088749 -121561547 + L1_Mur3 LINE L1 5074 5289 -591 1 14 2747 248 51 44 chrX 45088762 45089599 -121560697 + Lx7 LINE L1 6161 7003 -693 1 929 33789 35 0 0 chrX 45089599 45095022 -121555274 + L1Md_T LINE L1 69 5589 -297 1 929 9028 6 0 0 chrX 45095022 45096018 -121554278 + L1Md_T LINE L1 5590 6585 0 1 929 973 270 48 59 chrX 45096030 45096364 -121553932 + Lx7 LINE L1 6990 7322 -374 1 929 444 19 0 0 chrX 45096364 45096417 -121553879 + (ATTTG)n Simple_repeat Simple_repeat 2 54 0 1 929 973 270 48 59 chrX 45096417 45096503 -121553793 + Lx7 LINE L1 7323 7405 -291 1 929 23 54 0 0 chrX 45096635 45096672 -121553624 + AT_rich Low_complexity Low_complexity 1 37 0 1 929 323 307 0 0 chrX 45096673 45096748 -121553548 + B4A SINE B4 216 290 -2 1 929 393 39 0 0 chrX 45096766 45096817 -121553479 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 929 3099 37 2 7 chrX 45096885 45097289 -121553007 + L1Md_F3 LINE L1 6160 6561 -23 1 929 240 59 0 0 chrX 45100397 45100431 -121549865 + (GTTTG)n Simple_repeat Simple_repeat 2 35 0 1 929 180 222 0 135 chrX 45100523 45100575 -121549721 - MIRb SINE MIR -164 104 60 1 929 889 252 110 14 chrX 45100627 45100909 -121549387 - MER63B DNA AcHobo 0 436 128 1 929 726 324 58 27 chrX 45100956 45101216 -121549080 - B4A SINE B4 -24 268 1 1 929 7293 66 0 11 chrX 45101664 45102653 -121547643 - L1Md_F2 LINE L1 0 6582 5605 1 929 525 301 82 10 chrX 45102982 45103177 -121547119 + ID_B1 SINE B4 1 209 -15 1 929 270 320 111 41 chrX 45103217 45103449 -121546847 - MIRm SINE MIR -23 245 1 1 929 267 34 86 0 chrX 45104213 45104267 -121546029 - L1_Mus2 LINE L1 -4 6578 6518 1 929 261 295 14 6 chrX 45104472 45104552 -121545744 - MIR SINE MIR -79 189 112 1 929 301 303 16 29 chrX 45105200 45105322 -121544974 - MLT1H2 LTR MaLR -17 543 390 1 929 252 319 9 14 chrX 45105490 45105580 -121544716 + B1_Mur2 SINE Alu 41 132 -17 1 929 201 133 0 0 chrX 45105581 45105611 -121544685 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 929 275 303 13 13 chrX 45108029 45108106 -121542190 - MIR SINE MIR -61 147 71 1 929 733 329 34 0 chrX 45108722 45108929 -121541367 - ID_B1 SINE B4 -1 223 10 1 929 303 286 0 0 chrX 45109070 45109175 -121541121 + L1ME3A LINE L1 5394 5498 -675 1 929 247 312 76 30 chrX 45109351 45109615 -121540681 + L1ME3A LINE L1 5896 6171 -2 1 929 3984 101 23 0 chrX 45109621 45110336 -121539960 - Lx3B LINE L1 -987 5986 5263 1 929 5913 128 24 20 chrX 45110336 45111301 -121538995 + Lx3B LINE L1 6002 6970 -3 1 929 472 327 62 0 chrX 45111341 45111454 -121538842 + RSINE1 SINE B4 44 163 -2 1 929 1157 74 0 0 chrX 45111534 45111682 -121538614 + B1_Mus1 SINE Alu 1 148 0 1 929 327 176 54 0 chrX 45111787 45111861 -121538435 + Lx7 LINE L1 7601 7678 -18 1 929 1377 181 24 0 chrX 45111888 45112137 -121538159 + Lx5 LINE L1 6796 7050 0 1 929 924 9 0 0 chrX 45112856 45112961 -121537335 + (GAA)n Simple_repeat Simple_repeat 2 106 0 1 929 676 348 71 66 chrX 45114625 45115382 -121534914 + L1M3b LINE L1 2 762 -5519 1 929 1067 266 40 17 chrX 45115629 45116049 -121534247 + L1MA7 LINE L1 5715 6144 -147 1 929 351 0 0 0 chrX 45116061 45116100 -121534196 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 929 429 274 26 0 chrX 45116669 45116786 -121533510 + B1F1 SINE Alu 22 141 -8 1 929 1099 306 46 40 chrX 45117314 45117685 -121532611 - MTD LTR MaLR -22 397 25 1 929 1812 229 142 82 chrX 45117913 45118489 -121531807 - RMER19C LTR ERVK 0 611 1 1 929 1568 48 28 9 chrX 45118519 45118730 -121531566 + L1Md_F3 LINE L1 6369 6583 -1 1 929 1086 127 0 0 chrX 45118937 45119094 -121531202 - ORR1A3 LTR MaLR 0 326 170 1 929 4107 123 24 13 chrX 45119094 45119768 -121530528 - Lx LINE L1 -18 6636 5956 1 929 1381 41 317 0 chrX 45119761 45120004 -121530292 - L1Md_F2 LINE L1 0 6582 6263 1 929 2684 102 13 0 chrX 45119998 45120522 -121529774 - Lx LINE L1 -661 5975 5447 1 929 9090 29 0 0 chrX 45120518 45122295 -121528001 - L1Md_T LINE L1 0 6582 4806 1 929 1492 124 19 0 chrX 45122293 45122551 -121527745 - L1_Mm LINE L1 -421 5462 5200 1 929 2842 140 4 20 chrX 45122547 45122577 -121527719 + L1_Mm LINE L1 4645 4674 -1209 1 929 1173 74 0 0 chrX 45122577 45122725 -121527571 + B1_Mus1 SINE Alu 1 148 0 1 929 2842 140 4 20 chrX 45122725 45123197 -121527099 + L1_Mm LINE L1 4675 5139 -744 1 929 934 220 29 48 chrX 45123198 45123457 -121526839 - ORR1A3 LTR MaLR -164 230 1 1 929 508 304 74 67 chrX 45123786 45124136 -121526160 + L1_Mur3 LINE L1 1708 2074 -3806 1 929 363 23 0 0 chrX 45124136 45124180 -121526116 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 1 929 508 304 74 67 chrX 45124180 45124368 -121525928 + L1_Mur3 LINE L1 2075 2250 -3630 1 929 404 231 93 40 chrX 45124374 45124583 -121525713 + L1_Mur3 LINE L1 2979 3203 -2677 1 929 919 195 113 0 chrX 45124583 45124768 -121525528 + B3 SINE B2 2 207 -9 1 929 404 231 93 40 chrX 45124768 45124882 -121525414 + L1_Mur3 LINE L1 3204 3319 -2561 1 929 2171 127 0 28 chrX 45124883 45125239 -121525057 - Lx2 LINE L1 -5 6992 6647 1 929 201 121 0 0 chrX 45125246 45125279 -121525017 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 929 503 239 67 0 chrX 45125301 45125435 -121524861 - Lx8 LINE L1 -536 6937 6795 1 929 663 202 68 14 chrX 45125738 45125925 -121524371 - RLTR25B LTR ERVK 0 1028 732 1 929 2615 157 37 60 chrX 45125918 45126361 -121523935 - RLTR25B LTR ERVK -504 524 87 1 929 234 0 0 0 chrX 45126361 45126387 -121523909 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 929 243 0 0 0 chrX 45126387 45126413 -121523883 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 929 2615 157 37 60 chrX 45126413 45126504 -121523792 - RLTR25B LTR ERVK -942 86 2 1 929 324 0 0 0 chrX 45127245 45127281 -121523015 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 929 729 310 107 0 chrX 45127285 45127472 -121522824 - B4 SINE B4 -3 289 83 1 929 800 232 196 37 chrX 45127504 45127826 -121522470 - Lx LINE L1 -30 7443 7071 1 929 387 60 0 0 chrX 45127847 45127897 -121522399 + (TTTC)n Simple_repeat Simple_repeat 3 52 0 1 929 2277 159 34 2 chrX 45127910 45128320 -121521976 - Lx LINE L1 -1 6653 6231 1 929 2066 60 0 19 chrX 45128333 45128604 -121521692 - L1_Mus2 LINE L1 0 6566 6301 2 929 196 287 8 76 chrX 45129716 45129848 -121520448 - L2c LINE L2 -61 3326 3204 2 929 407 269 70 27 chrX 45130226 45130413 -121519883 + L1MB7 LINE L1 4020 4214 -1932 2 929 333 343 7 7 chrX 45130515 45130656 -121519640 + L1MB7 LINE L1 4219 4359 -1787 2 929 453 341 81 11 chrX 45130768 45131138 -121519158 + L1MB7 LINE L1 4495 4890 -1256 2 929 2512 177 87 47 chrX 45131227 45131778 -121518518 + RMER4B LTR ERVK 4 576 -9 2 929 644 221 70 8 chrX 45131891 45131940 -121518356 + L1MB7 LINE L1 5140 5190 -956 2 929 697 217 35 7 chrX 45131940 45132084 -121518212 + B1F2 SINE Alu 2 149 0 2 929 644 221 70 8 chrX 45132084 45132276 -121518020 + L1MB7 LINE L1 5191 5396 -750 2 929 1115 88 29 6 chrX 45132279 45132450 -121517846 + L1_Mus3 LINE L1 6455 6629 -9 2 929 1388 282 64 43 chrX 45132497 45133278 -121517018 + L1MB7 LINE L1 5386 6182 -2 2 929 298 247 162 26 chrX 45133370 45133524 -121516772 + MLT1C LTR MaLR 148 322 -145 2 929 2987 100 0 9 chrX 45133525 45133971 -121516325 - Lx2 LINE L1 -401 6596 6155 2 929 2481 111 45 0 chrX 45133971 45134351 -121515945 + Lx2 LINE L1 6601 6997 0 2 929 290 314 145 0 chrX 45134361 45134520 -121515776 + MLT1C LTR MaLR 280 461 -6 2 929 4961 40 0 2 chrX 45134715 45135310 -121514986 + L1Md_F2 LINE L1 5989 6582 0 2 929 351 318 18 26 chrX 45136352 45136581 -121513715 + L1MEe LINE L1 155 381 -4473 2 929 316 229 117 68 chrX 45136772 45136875 -121513421 + PB1D7 SINE Alu 3 110 -10 2 929 572 276 136 3 chrX 45137017 45137319 -121512977 + L1MB7 LINE L1 5581 5922 -262 2 929 407 186 49 0 chrX 45137337 45137439 -121512857 + RCHARR1 DNA MER1_type 789 895 -79 2 929 339 119 0 0 chrX 45137661 45137728 -121512568 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 2 929 227 206 32 0 chrX 45137749 45137812 -121512484 + CT-rich Low_complexity Low_complexity 4 68 0 2 929 2740 285 95 13 chrX 45138500 45138721 -121511575 + Lx8 LINE L1 5638 5920 -1553 2 929 387 0 0 0 chrX 45138721 45138764 -121511532 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 929 2740 300 71 40 chrX 45138764 45139903 -121510393 + Lx8 LINE L1 5921 7085 -388 2 929 3080 138 22 16 chrX 45140019 45140520 -121509776 + Lx2 LINE L1 6488 6991 -6 2 929 339 333 166 5 chrX 45140642 45140835 -121509461 + HAL1 LINE L1 645 868 -1639 2 929 1145 259 132 18 chrX 45141010 45141466 -121508830 + Lx8 LINE L1 6966 7473 0 2 929 474 18 0 0 chrX 45141653 45141708 -121508588 + (GAAA)n Simple_repeat Simple_repeat 3 57 0 2 929 728 290 114 49 chrX 45141820 45142310 -121507986 + HAL1 LINE L1 1382 1903 -604 2 929 282 255 11 11 chrX 45142429 45142524 -121507772 + HAL1b LINE L1 1222 1316 -693 2 929 36663 10 2 7 chrX 45142696 45148097 -121502199 + L1Md_A LINE L1 214 5586 -297 2 929 8940 9 0 0 chrX 45148097 45149093 -121501203 + L1Md_A LINE L1 5587 6582 0 2 929 357 295 0 89 chrX 45149313 45149436 -121500860 - PB1D10 SINE Alu 0 117 6 2 929 22 0 0 0 chrX 45149562 45149584 -121500712 + AT_rich Low_complexity Low_complexity 1 22 0 2 929 472 287 155 13 chrX 45149672 45150047 -121500249 + HAL1b LINE L1 1580 2007 -2 2 929 8255 85 16 15 chrX 45150345 45151517 -121498779 + Lx3_Mus LINE L1 5837 7009 0 2 929 540 0 0 0 chrX 45151790 45151850 -121498446 + (CTA)n Simple_repeat Simple_repeat 3 62 0 2 929 307 377 85 62 chrX 45152059 45152319 -121497977 + B4A SINE B4 11 276 -16 2 929 234 0 0 0 chrX 45152328 45152354 -121497942 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 929 211 257 162 0 chrX 45152739 45152813 -121497483 - MIR SINE MIR -10 252 167 2 929 1107 169 26 5 chrX 45154597 45154812 -121495484 + MERVL_2A-int LTR ERVL 749 995 -4766 2 929 242 320 280 0 chrX 45155124 45155249 -121495047 + MER5A DNA MER1_type 5 164 -25 2 929 1310 208 33 36 chrX 45156338 45156503 -121493793 + ORR1D1 LTR MaLR 5 164 -210 2 929 366 23 0 0 chrX 45156503 45156546 -121493750 + (TC)n Simple_repeat Simple_repeat 2 44 0 2 929 1310 208 33 36 chrX 45156546 45156685 -121493611 + ORR1D1 LTR MaLR 165 308 -66 2 929 615 196 30 0 chrX 45156695 45156828 -121493468 + URR1A DNA MER1_type 58 194 -32 2 929 202 261 14 28 chrX 45156995 45157066 -121493230 + (TGAA)n Simple_repeat Simple_repeat 3 72 0 2 929 1140 34 0 13 chrX 45157303 45157453 -121492843 - L1Md_F3 LINE L1 -17 6567 6420 2 929 350 262 106 12 chrX 45157952 45158037 -121492259 + MLT1H LTR MaLR 437 529 -20 2 929 232 304 123 55 chrX 45158613 45158686 -121491610 + ID SINE ID 1 78 -146 2 929 1235 48 0 0 chrX 45159691 45159838 -121490458 - B1_Mus2 SINE Alu 0 147 1 2 929 3106 123 11 78 chrX 45160192 45160566 -121489730 - RMER17A2 LTR ERVK -220 738 290 2 929 333 47 0 0 chrX 45160566 45160609 -121489687 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 929 3106 117 9 73 chrX 45160609 45160904 -121489392 - RMER17A2 LTR ERVK -613 293 2 2 929 490 343 71 61 chrX 45161946 45162272 -121488024 + MLT1J1 LTR MaLR 66 394 -50 2 929 477 269 84 0 chrX 45163659 45163826 -121486470 + MER104 DNA Tc2 1 181 0 2 929 546 249 55 0 chrX 45164649 45164830 -121485466 + L1MD1 LINE L1 5741 5931 -311 2 929 303 268 79 14 chrX 45164831 45164952 -121485344 - PB1D7 SINE Alu -7 142 13 2 929 302 135 0 0 chrX 45165241 45165293 -121485003 - Lx9 LINE L1 -571 7073 7022 2 929 343 327 18 0 chrX 45165294 45165404 -121484892 + MER103 DNA DNA 48 159 -7 2 929 252 0 0 0 chrX 45165753 45165781 -121484515 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 2 929 398 269 33 42 chrX 45166155 45166275 -121484021 + MLT1C LTR MaLR 349 467 0 2 929 198 176 0 0 chrX 45167414 45167465 -121482831 + A-rich Low_complexity Low_complexity 1 51 0 2 929 250 293 37 0 chrX 45167812 45167894 -121482402 + MER103 DNA DNA 70 154 -12 2 929 433 346 89 35 chrX 45168141 45168455 -121481841 - L3 LINE CR1 -3 4486 4156 2 929 533 315 27 33 chrX 45168573 45168757 -121481539 + MTEa LTR MaLR 1 183 -196 2 929 295 279 0 16 chrX 45168760 45168822 -121481474 + MTD LTR MaLR 103 163 -256 2 929 531 0 0 0 chrX 45168891 45168950 -121481346 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 929 912 327 94 30 chrX 45169083 45169474 -121480822 + MTE-int LTR MaLR 1 418 -1162 2 929 230 0 33 0 chrX 45169474 45169504 -121480792 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 929 912 327 94 30 chrX 45169504 45169550 -121480746 + MTE-int LTR MaLR 419 465 -1115 2 929 426 260 61 94 chrX 45169562 45169688 -121480608 + MTB_Mm LTR MaLR 10 143 -264 2 929 954 158 153 0 chrX 45169688 45169884 -121480412 + URR1A DNA MER1_type 1 226 0 2 929 426 260 61 94 chrX 45169884 45169969 -121480327 + MTB_Mm LTR MaLR 144 214 -193 2 929 895 34 0 0 chrX 45170116 45170234 -121480062 + L1_Mus1 LINE L1 6450 6567 0 2 929 252 0 0 0 chrX 45174268 45174296 -121476000 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 2 929 523 246 31 0 chrX 45175107 45175237 -121475059 + B1F1 SINE Alu 2 135 -14 2 929 360 88 0 0 chrX 45175246 45175303 -121474993 + (TTGG)n Simple_repeat Simple_repeat 4 60 0 2 929 260 310 42 7 chrX 45175544 45175687 -121474609 + L1MC4 LINE L1 7297 7444 -598 2 929 744 236 93 9 chrX 45175809 45176018 -121474278 - B3A SINE B2 0 216 2 2 929 363 212 0 0 chrX 45176059 45176144 -121474152 + (TG)n Simple_repeat Simple_repeat 2 86 0 2 929 327 167 0 0 chrX 45177583 45177649 -121472647 + (CA)n Simple_repeat Simple_repeat 2 67 0 2 929 204 220 0 39 chrX 45178042 45178094 -121472202 + CT-rich Low_complexity Low_complexity 1 50 0 2 929 937 196 15 64 chrX 45179399 45179601 -121470695 + B3A SINE B2 1 192 -6 2 929 450 294 20 34 chrX 45180316 45180464 -121469832 + RSINE1 SINE B4 3 148 -17 2 929 213 281 0 30 chrX 45180614 45180680 -121469616 + BC1_Mm scRNA scRNA 8 71 -81 2 929 937 263 5 0 chrX 45180621 45180826 -121469470 + ID_B1 SINE B4 14 219 -5 2 929 22 0 0 0 chrX 45181049 45181071 -121469225 + AT_rich Low_complexity Low_complexity 1 22 0 2 929 21 0 0 0 chrX 45181761 45181782 -121468514 + AT_rich Low_complexity Low_complexity 1 21 0 2 929 387 312 43 0 chrX 45183540 45183681 -121466615 + B1F2 SINE Alu 3 149 0 2 929 203 194 0 31 chrX 45183816 45183880 -121466416 + A-rich Low_complexity Low_complexity 1 62 0 2 929 961 226 56 126 chrX 45184225 45184549 -121465747 + RLTR28B LTR ERVL 1 302 -179 2 929 1661 69 56 26 chrX 45184549 45184818 -121465478 + L1_Mus3 LINE L1 6362 6638 0 2 929 961 226 56 126 chrX 45184818 45184889 -121465407 + RLTR28B LTR ERVL 303 368 -113 2 929 243 188 0 20 chrX 45184917 45184966 -121465330 + RLTR28B LTR ERVL 451 498 -26 2 929 363 215 0 37 chrX 45185125 45185207 -121465089 + RSINE1 SINE B4 63 141 -24 2 929 737 189 15 0 chrX 45185938 45186070 -121464226 + B1_Mur1 SINE Alu 14 147 -2 2 929 644 257 26 0 chrX 45186229 45186381 -121463915 - RMER30 DNA MER1_type -39 163 8 2 929 727 252 0 41 chrX 45186605 45186775 -121463521 - RSINE1 SINE B4 0 165 3 2 929 489 304 0 53 chrX 45187267 45187437 -121462859 + RSINE1 SINE B4 5 165 0 2 929 197 329 106 0 chrX 45187462 45187547 -121462749 + MIRm SINE MIR 61 154 -122 2 929 208 225 0 0 chrX 45188053 45188093 -121462203 + (CTA)n Simple_repeat Simple_repeat 2 41 0 2 929 225 348 29 29 chrX 45188498 45188634 -121461662 + L2b LINE L2 3235 3370 -5 2 929 420 20 0 0 chrX 45189031 45189080 -121461216 + (TTTTG)n Simple_repeat Simple_repeat 4 52 0 2 929 548 270 102 19 chrX 45189212 45189427 -121460869 + MIRc SINE MIR 19 251 -17 2 929 4854 56 0 0 chrX 45189638 45190241 -121460055 - L1Md_F2 LINE L1 -2 6580 5978 2 929 1883 131 18 63 chrX 45190418 45190751 -121459545 + ORR1A3 LTR MaLR 1 318 -8 2 929 349 280 42 21 chrX 45190746 45190841 -121459455 - B1F SINE Alu -44 105 9 2 929 14437 14 3 1 chrX 45191098 45192772 -121457524 + L1Md_A LINE L1 3910 5586 -297 2 929 8885 10 0 0 chrX 45192772 45193768 -121456528 + L1Md_A LINE L1 5587 6582 0 2 929 835 250 44 15 chrX 45194473 45194676 -121455620 + B3 SINE B2 1 209 -7 2 929 302 297 0 0 chrX 45195782 45195856 -121454440 + ID4_ SINE ID 1 74 -9 2 929 368 236 0 27 chrX 45196195 45196269 -121454027 + ID4 SINE ID 12 83 0 2 929 531 45 0 0 chrX 45196394 45196460 -121453836 + (TTA)n Simple_repeat Simple_repeat 2 67 0 2 929 278 229 0 0 chrX 45196530 45196578 -121453718 + ID4_ SINE ID 4 51 -32 2 929 212 353 60 0 chrX 45196581 45196697 -121453599 + L3 LINE CR1 4306 4428 -61 2 929 612 227 154 14 chrX 45196729 45196872 -121453424 - RSINE1 SINE B4 0 165 3 2 929 189 333 0 0 chrX 45196880 45196931 -121453365 + L3 LINE CR1 4411 4461 -28 2 929 307 254 0 0 chrX 45196986 45197057 -121453239 + ID4_ SINE ID 2 72 -11 3 929 203 265 0 0 chrX 45197329 45197378 -121452918 + (CATA)n Simple_repeat Simple_repeat 4 52 0 3 929 985 160 193 0 chrX 45197951 45198132 -121452164 + B3 SINE B2 1 216 0 3 929 438 261 139 36 chrX 45198786 45199009 -121451287 + L1MC4a LINE L1 7016 7261 -621 3 929 3858 196 79 44 chrX 45199065 45199956 -121450340 + Lx9 LINE L1 6206 7127 -517 3 929 1747 153 18 110 chrX 45199965 45200355 -121449941 + ORR1B1 LTR MaLR 41 394 0 3 929 1841 193 6 9 chrX 45200363 45200708 -121449588 + Lx9 LINE L1 7134 7477 -167 3 929 303 155 0 0 chrX 45200741 45200799 -121449497 + Lx9 LINE L1 7586 7643 -1 3 929 2307 286 67 18 chrX 45200815 45201640 -121448656 + L1MC1 LINE L1 5439 6303 -30 3 929 207 0 0 0 chrX 45201667 45201690 -121448606 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 3 929 493 148 82 36 chrX 45201693 45201803 -121448493 - B1_Mus2 SINE Alu -6 143 40 3 929 224 0 0 157 chrX 45201806 45201914 -121448382 + (CTCTG)n Simple_repeat Simple_repeat 5 95 0 3 929 256 211 14 40 chrX 45201982 45202056 -121448240 + L1MC4a LINE L1 7624 7695 -187 3 929 529 238 52 45 chrX 45202117 45202271 -121448025 + MTE2a LTR MaLR 181 335 -44 3 929 262 341 151 7 chrX 45202299 45202317 -121447979 - RSINE1 SINE B4 -5 160 143 3 929 459 0 0 0 chrX 45202317 45202368 -121447928 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 929 262 341 151 7 chrX 45202368 45202488 -121447808 - RSINE1 SINE B4 -23 142 2 3 929 237 182 0 18 chrX 45202845 45202901 -121447395 + A-rich Low_complexity Low_complexity 1 55 0 3 929 809 229 64 5 chrX 45203347 45203534 -121446762 + B3 SINE B2 2 201 -15 3 929 387 0 0 0 chrX 45203534 45203577 -121446719 + (TAAAA)n Simple_repeat Simple_repeat 1 43 0 3 929 809 229 64 5 chrX 45203577 45203591 -121446705 + B3 SINE B2 202 215 -1 3 929 276 30 0 0 chrX 45203698 45203731 -121446565 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 929 271 259 44 11 chrX 45204345 45204435 -121445861 + MLT1A1 LTR MaLR 316 408 0 3 929 404 142 267 0 chrX 45205401 45205521 -121444775 + Lx9 LINE L1 7424 7575 -69 3 929 345 125 0 0 chrX 45205528 45205584 -121444712 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 929 402 21 0 0 chrX 45206703 45206750 -121443546 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 929 888 285 39 27 chrX 45206754 45207014 -121443282 + B4A SINE B4 12 274 -18 3 929 252 0 0 0 chrX 45207168 45207196 -121443100 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 929 471 231 141 0 chrX 45207196 45207317 -121442979 - B1_Mur1 SINE Alu -10 139 2 3 929 272 167 28 64 chrX 45207424 45207533 -121442763 + (CATATA)n Simple_repeat Simple_repeat 2 106 0 3 929 22 35 0 0 chrX 45207896 45207925 -121442371 + AT_rich Low_complexity Low_complexity 1 29 0 3 929 1232 255 86 24 chrX 45208439 45208903 -121441393 + L1M5 LINE L1 5267 5765 -359 3 929 46 62 0 0 chrX 45209826 45209907 -121440389 + AT_rich Low_complexity Low_complexity 1 81 0 3 929 213 290 210 0 chrX 45210539 45210639 -121439657 - MIRc SINE MIR -135 133 13 3 929 672 13 0 0 chrX 45210672 45210749 -121439547 + (GA)n Simple_repeat Simple_repeat 1 77 0 3 929 2418 209 91 20 chrX 45211783 45212847 -121437449 + Lx4B LINE L1 5773 6982 -15 3 929 209 314 70 14 chrX 45213387 45213482 -121436814 + L2c LINE L2 3244 3345 -30 3 929 288 290 0 16 chrX 45213950 45214013 -121436283 + ID4_ SINE ID 4 65 -18 3 929 1213 21 14 0 chrX 45215104 45215249 -121435047 + B1_Mus2 SINE Alu 1 147 0 3 929 207 0 0 0 chrX 45215249 45215272 -121435024 + (A)n Simple_repeat Simple_repeat 1 23 0 3 929 7001 28 0 12 chrX 45215299 45216135 -121434161 + L1Md_A LINE L1 5757 6582 0 3 929 258 32 0 0 chrX 45216340 45216371 -121433925 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 3 929 819 276 21 26 chrX 45216374 45216564 -121433732 - B3 SINE B2 -26 190 2 3 929 669 182 135 0 chrX 45216646 45216772 -121433524 - B1_Mur3 SINE Alu -6 143 1 3 929 1073 82 7 7 chrX 45217118 45217265 -121433031 + B1_Mm SINE Alu 1 147 0 3 929 489 247 62 26 chrX 45217332 45217527 -121432769 - Tigger7 DNA MER2_type -32 2459 2258 3 929 259 350 40 20 chrX 45217603 45217702 -121432594 - Tigger7 DNA MER2_type -2389 102 2 3 929 214 301 85 55 chrX 45217849 45218014 -121432282 - L2 LINE L2 -1391 2028 1859 3 929 747 78 0 0 chrX 45218047 45218150 -121432146 + (TGGA)n Simple_repeat Simple_repeat 3 105 0 3 929 675 308 24 72 chrX 45218177 45218510 -121431786 + RLTR18 LTR ERVK 14 330 -286 3 929 821 230 26 16 chrX 45218538 45218732 -121431564 + RLTR18B LTR ERVK 190 385 -127 3 116 33846 34 1 0 chrX 45219552 45225840 -121424456 + L1Md_T LINE L1 1 5589 -297 3 930 9014 6 0 0 chrX 45225840 45226905 -121423391 + L1Md_T LINE L1 5590 6585 0 3 930 370 259 122 32 chrX 45228001 45228132 -121422164 + RSINE1 SINE B4 4 136 -29 3 930 25 0 0 0 chrX 45228473 45228498 -121421798 + AT_rich Low_complexity Low_complexity 1 25 0 3 930 21 36 0 0 chrX 45229151 45229179 -121421117 + AT_rich Low_complexity Low_complexity 1 28 0 3 930 1247 94 17 6 chrX 45230254 45230435 -121419861 + B2_Mm2 SINE B2 4 186 -9 3 930 31 44 0 0 chrX 45231601 45231646 -121418650 + AT_rich Low_complexity Low_complexity 1 45 0 3 930 1137 69 14 0 chrX 45232250 45232394 -121417902 + B1_Mus2 SINE Alu 2 147 0 3 930 209 301 27 14 chrX 45233307 45233381 -121416915 - MIR3 SINE MIR 0 208 134 3 930 295 129 129 0 chrX 45233490 45233552 -121416744 + tRNA-Ala-GCA tRNA tRNA 3 72 -3 3 930 3966 76 85 2 chrX 45234035 45234602 -121415694 + Lx3A LINE L1 6361 6974 -7 3 930 23 33 0 0 chrX 45234603 45234633 -121415663 + AT_rich Low_complexity Low_complexity 1 30 0 3 930 320 320 33 0 chrX 45234634 45234756 -121415540 + L1ME4a LINE L1 5966 6091 -33 3 930 374 327 124 0 chrX 45234783 45234896 -121415400 + PB1 SINE Alu 1 127 0 3 930 256 333 13 0 chrX 45234903 45234981 -121415315 + ID4 SINE ID 1 79 -4 3 930 222 226 0 0 chrX 45235711 45235764 -121414532 + (TTTA)n Simple_repeat Simple_repeat 1 53 0 3 930 413 145 0 13 chrX 45235881 45235958 -121414338 + GA-rich Low_complexity Low_complexity 4 79 0 3 930 871 226 28 42 chrX 45236170 45236387 -121413909 + B3 SINE B2 3 216 0 3 930 183 42 0 0 chrX 45236628 45236652 -121413644 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 930 221 102 0 39 chrX 45236978 45237029 -121413267 + (TTTG)n Simple_repeat Simple_repeat 1 49 0 3 930 271 376 65 29 chrX 45237439 45237609 -121412687 - MIR SINE MIR -15 247 72 3 930 704 210 28 21 chrX 45237889 45238030 -121412266 + B1_Mur3 SINE Alu 1 142 -7 3 930 642 179 60 0 chrX 45238417 45238568 -121411728 + Lx7 LINE L1 7534 7693 -3 3 930 894 305 50 37 chrX 45239477 45239719 -121410577 + B4A SINE B4 3 247 -45 3 930 1201 27 0 7 chrX 45239726 45239875 -121410421 + B1_Mus1 SINE Alu 1 148 0 3 930 395 286 0 19 chrX 45239897 45240004 -121410292 + B4A SINE B4 188 292 0 3 930 195 232 0 0 chrX 45240004 45240060 -121410236 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 930 783 231 0 0 chrX 45241715 45241858 -121408438 + B1_Mur3 SINE Alu 2 144 -5 3 930 509 0 16 0 chrX 45241993 45242054 -121408242 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 930 376 350 72 36 chrX 45242661 45242910 -121407386 + Tigger15a DNA TcMar 65 322 -393 3 930 544 319 92 38 chrX 45243351 45243612 -121406684 - B4A SINE B4 -17 275 1 3 930 29 0 0 0 chrX 45243636 45243665 -121406631 + AT_rich Low_complexity Low_complexity 1 29 0 3 930 531 0 0 0 chrX 45245001 45245060 -121405236 + (GA)n Simple_repeat Simple_repeat 1 59 0 3 930 26 30 0 0 chrX 45245176 45245209 -121405087 + GC_rich Low_complexity Low_complexity 1 33 0 3 930 572 164 22 7 chrX 45246900 45247035 -121403261 + CT-rich Low_complexity Low_complexity 2 138 0 3 930 366 346 0 9 chrX 45247039 45247147 -121403149 - PB1D10 SINE Alu -1 116 10 3 930 750 320 64 17 chrX 45248843 45249189 -121401107 - Lx8 LINE L1 -145 7328 6967 3 930 347 317 73 62 chrX 45249194 45249386 -121400910 - MIRb SINE MIR -60 208 15 3 930 930 211 67 52 chrX 45249644 45249766 -121400530 + B3 SINE B2 1 119 -97 3 930 8030 39 4 0 chrX 45249766 45250735 -121399561 + L1Md_F2 LINE L1 5609 6581 -1 3 930 930 211 67 52 chrX 45250735 45250822 -121399474 + B3 SINE B2 120 213 -3 3 930 21 0 0 0 chrX 45251893 45251914 -121398382 + AT_rich Low_complexity Low_complexity 1 21 0 3 930 264 211 0 0 chrX 45252921 45252973 -121397323 - ORR1C1 LTR MaLR -1 369 318 3 930 21 36 0 0 chrX 45252975 45253003 -121397293 + AT_rich Low_complexity Low_complexity 1 28 0 3 930 1561 195 77 54 chrX 45253003 45253431 -121396865 - Lx3C LINE L1 -2 6974 6537 3 930 299 217 0 0 chrX 45253431 45253491 -121396805 - ORR1C1 LTR MaLR -50 320 261 3 930 1156 221 48 63 chrX 45254071 45254404 -121395892 - ORR1D2 LTR MaLR -42 328 1 3 930 961 212 89 9 chrX 45254432 45254646 -121395650 - ORR1C1 LTR MaLR -147 231 1 3 930 844 231 132 9 chrX 45254646 45254873 -121395423 - ORR1C1-int LTR MaLR -194 1176 922 3 930 204 40 0 0 chrX 45254902 45254927 -121395369 + (CATTA)n Simple_repeat Simple_repeat 2 26 0 3 930 257 367 67 13 chrX 45254946 45255095 -121395201 + LTR16A LTR ERVL 1 157 -294 3 930 242 291 25 25 chrX 45255398 45255479 -121394817 - ID4 SINE ID -1 82 2 3 930 373 276 235 36 chrX 45257405 45257882 -121392414 - Charlie21a DNA MER1_type -452 761 190 3 930 630 232 0 66 chrX 45258061 45258213 -121392083 + B1F SINE Alu 1 142 -7 3 930 570 258 40 0 chrX 45258235 45258359 -121391937 + RSINE1 SINE B4 1 129 -36 3 930 405 58 0 0 chrX 45258367 45258419 -121391877 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 930 921 215 81 15 chrX 45259119 45259379 -121390917 - ORSL-2b DNA Tip100 -3 505 229 3 930 218 343 75 28 chrX 45259824 45260079 -121390217 + L2 LINE L2 1832 2098 -1321 3 930 1586 37 21 0 chrX 45260222 45260411 -121389885 - B2_Mm1t SINE B2 0 193 1 3 930 519 78 0 0 chrX 45260417 45260494 -121389802 - L1Md_F2 LINE L1 -12 6570 6494 3 930 1335 234 101 38 chrX 45260528 45260955 -121389341 + Lx6 LINE L1 7007 7460 0 4 930 316 369 46 0 chrX 45260967 45261097 -121389199 + B1F1 SINE Alu 1 136 -13 4 930 249 57 0 0 chrX 45262113 45262148 -121388148 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 930 375 23 0 0 chrX 45262172 45262216 -121388080 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 930 285 315 45 0 chrX 45262305 45262394 -121387902 - B1_Mus2 SINE Alu -42 105 13 4 930 1188 219 220 9 chrX 45262620 45262957 -121387339 - MTD LTR MaLR -2 417 10 4 930 1185 239 106 50 chrX 45262966 45263160 -121387136 - MTD-int LTR MaLR -4 1254 1042 4 930 1613 22 0 0 chrX 45263160 45263344 -121386952 + B2_Mm1t SINE B2 2 185 -8 4 930 1185 239 106 50 chrX 45263344 45263370 -121386926 - MTD-int LTR MaLR -217 1041 1017 4 930 6829 14 1 0 chrX 45263370 45264146 -121386150 + L1Md_A LINE L1 5805 6581 -1 4 930 1185 239 106 50 chrX 45264146 45264360 -121385936 - MTD-int LTR MaLR -242 1016 795 4 930 238 372 9 28 chrX 45264361 45264574 -121385722 - L1M5 LINE L1 -1141 5005 4797 4 930 994 85 18 204 chrX 45264638 45264859 -121385437 + B2_Mm2 SINE B2 1 180 -15 4 930 645 49 0 0 chrX 45264859 45264940 -121385356 + (GAAA)n Simple_repeat Simple_repeat 3 83 0 4 930 211 184 0 0 chrX 45265024 45265062 -121385234 + G-rich Low_complexity Low_complexity 1 38 0 4 930 414 100 0 0 chrX 45266058 45266118 -121384178 + (A)n Simple_repeat Simple_repeat 1 60 0 4 930 338 280 39 85 chrX 45266411 45266540 -121383756 + MIR3 SINE MIR 9 131 -77 4 930 190 286 36 0 chrX 45267463 45267519 -121382777 + MIRm SINE MIR 90 147 -129 4 930 215 288 136 0 chrX 45267832 45267891 -121382405 - MIR SINE MIR -92 116 50 4 930 732 169 20 27 chrX 45267930 45268076 -121382220 - B1_Mm SINE Alu 0 147 3 4 930 187 286 191 0 chrX 45268386 45268470 -121381826 - L2c LINE L2 -1 3386 3287 4 930 180 163 0 0 chrX 45268620 45268663 -121381633 + A-rich Low_complexity Low_complexity 1 43 0 4 930 22 0 0 0 chrX 45268758 45268780 -121381516 + AT_rich Low_complexity Low_complexity 1 22 0 4 930 405 309 29 7 chrX 45268780 45268917 -121381379 + B1F1 SINE Alu 1 140 -9 4 930 207 354 73 0 chrX 45269228 45269324 -121380972 - L2a LINE L2 0 3426 3324 4 930 418 258 119 0 chrX 45270681 45270875 -121379421 - L1M5 LINE L1 -309 5815 5599 4 930 389 222 175 0 chrX 45270924 45271050 -121379246 + B1F SINE Alu 2 149 0 4 930 236 250 19 0 chrX 45271052 45271104 -121379192 + GA-rich Low_complexity Low_complexity 3 55 0 4 930 915 258 61 31 chrX 45272011 45272156 -121378140 - L1MA5 LINE L1 -129 6171 6013 4 930 998 53 0 8 chrX 45272156 45272290 -121378006 + (TCTCCC)n Simple_repeat Simple_repeat 3 135 0 4 930 915 258 61 31 chrX 45272290 45272568 -121377728 - L1MA5 LINE L1 -288 6012 5735 4 930 224 30 0 29 chrX 45272924 45272958 -121377338 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 4 930 1183 61 0 0 chrX 45273035 45273182 -121377114 + B1_Mus2 SINE Alu 1 147 0 4 930 716 279 57 35 chrX 45273809 45274031 -121376265 - B4 SINE B4 -50 242 3 4 930 430 245 101 84 chrX 45274078 45274386 -121375910 - Lx9 LINE L1 -9 7635 7323 4 930 447 19 0 0 chrX 45274388 45274440 -121375856 + (TTG)n Simple_repeat Simple_repeat 2 53 0 4 930 215 189 0 19 chrX 45274672 45274726 -121375570 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 930 241 308 7 36 chrX 45274734 45274872 -121375424 - L1MA6 LINE L1 -364 5936 5803 4 930 180 111 0 0 chrX 45275002 45275029 -121375267 + (T)n Simple_repeat Simple_repeat 1 27 0 4 930 743 227 68 31 chrX 45275591 45275782 -121374514 + ID_B1 SINE B4 3 200 -24 4 930 301 297 0 51 chrX 45275816 45275894 -121374402 + RSINE1 SINE B4 1 74 -91 4 930 935 222 0 22 chrX 45276073 45276253 -121374043 + B3A SINE B2 7 182 -16 4 930 328 301 0 14 chrX 45276389 45276463 -121373833 - ID2 SINE ID -5 78 6 4 930 547 279 21 0 chrX 45276558 45276698 -121373598 - ID_B1 SINE B4 0 224 82 4 930 22 0 0 0 chrX 45276973 45276995 -121373301 + AT_rich Low_complexity Low_complexity 1 22 0 4 930 25 0 0 0 chrX 45277222 45277247 -121373049 + AT_rich Low_complexity Low_complexity 1 25 0 4 930 373 305 97 22 chrX 45277247 45277381 -121372915 + ID_B1 SINE B4 81 224 0 4 930 259 289 30 20 chrX 45277568 45277667 -121372629 - L2a LINE L2 0 3426 3327 4 930 343 278 118 50 chrX 45278245 45278324 -121371972 - L2a LINE L2 -665 2754 2669 4 930 1159 36 0 41 chrX 45278324 45278470 -121371826 + B1_Mus2 SINE Alu 1 140 -7 4 930 519 60 0 0 chrX 45278470 45278537 -121371759 + (GA)n Simple_repeat Simple_repeat 2 68 0 4 930 343 278 118 50 chrX 45278537 45278676 -121371620 - L2a LINE L2 -751 2668 2521 4 930 1268 27 0 0 chrX 45278786 45278933 -121371363 - B1_Mus2 SINE Alu 0 147 1 4 930 1267 301 38 9 chrX 45278958 45279384 -121370912 - Lx8 LINE L1 -175 7298 6861 4 930 555 125 23 0 chrX 45279485 45279637 -121370659 - MTC-int LTR MaLR -503 1289 1208 4 930 319 287 126 0 chrX 45279810 45279953 -121370343 - MER3 DNA MER1_type -47 162 2 4 930 4468 153 68 8 chrX 45279969 45280826 -121369470 - MTC-int LTR MaLR -349 909 2 4 930 2384 132 28 10 chrX 45280825 45281223 -121369073 - MTC LTR MaLR 0 421 17 4 930 436 299 34 0 chrX 45281927 45282044 -121368252 + PB1 SINE Alu 1 121 -6 4 930 363 280 58 39 chrX 45282125 45282229 -121368067 + B1F1 SINE Alu 1 106 -43 4 930 588 256 162 27 chrX 45282302 45282487 -121367809 + B4 SINE B4 2 211 -81 4 930 537 133 93 19 chrX 45282515 45282622 -121367674 + B3 SINE B2 99 213 -3 4 930 889 234 39 14 chrX 45282679 45282887 -121367409 - B3 SINE B2 -3 213 1 4 930 341 251 53 117 chrX 45284348 45284524 -121365772 + MIR SINE MIR 29 199 -69 4 930 191 98 73 0 chrX 45285860 45285901 -121364395 + T-rich Low_complexity Low_complexity 4 47 0 4 930 1503 131 0 15 chrX 45286139 45286403 -121363893 - Lx2 LINE L1 0 6997 6738 4 930 274 206 44 0 chrX 45286746 45286814 -121363482 - B4A SINE B4 -3 289 219 4 930 1222 279 121 21 chrX 45286873 45287353 -121362943 - Lx8 LINE L1 -86 7387 6860 4 930 262 179 0 0 chrX 45287393 45287449 -121362847 - PB1D9 SINE Alu 0 120 65 4 930 566 284 4 84 chrX 45287399 45287637 -121362659 - B4A SINE B4 -71 221 3 4 930 320 236 14 0 chrX 45288910 45288982 -121361314 + ID4 SINE ID 3 75 -8 4 930 225 24 71 0 chrX 45289917 45289959 -121360337 + (GTTTG)n Simple_repeat Simple_repeat 2 46 0 4 930 1053 64 0 0 chrX 45289959 45290100 -121360196 - B1_Mus2 SINE Alu -1 146 6 4 930 406 175 0 134 chrX 45289993 45290112 -121360184 - MT2B LTR ERVL -337 264 162 4 930 292 238 0 38 chrX 45289998 45290129 -121360167 - ORR1B1-int LTR MaLR -755 754 629 4 930 277 285 155 19 chrX 45290282 45290443 -121359853 + MER33 DNA MER1_type 1 183 -141 4 930 1004 295 7 7 chrX 45292124 45292414 -121357882 + B4A SINE B4 2 291 -1 4 930 369 309 36 7 chrX 45292584 45292724 -121357572 - B1F2 SINE Alu 0 149 6 4 930 907 268 79 9 chrX 45292997 45293340 -121356956 - L1MA5 LINE L1 -296 6004 5638 4 930 585 216 111 77 chrX 45293714 45293895 -121356401 - B3A SINE B2 -11 187 1 4 930 334 250 185 37 chrX 45294830 45294992 -121355304 + B2_Mm2 SINE B2 1 186 -9 4 930 2620 64 14 0 chrX 45295541 45295886 -121354410 - L1_Mus1 LINE L1 0 6567 6218 4 930 1515 58 11 0 chrX 45296049 45296240 -121354056 - B2_Mm1t SINE B2 0 193 1 4 930 1554 53 0 5 chrX 45297581 45297772 -121352524 - B2_Mm2 SINE B2 -4 191 2 4 930 893 201 201 0 chrX 45297793 45297967 -121352329 - B3 SINE B2 -3 213 5 4 930 419 0 0 19 chrX 45297967 45298019 -121352277 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 930 936 151 0 7 chrX 45298094 45298241 -121352055 + B1_Mus2 SINE Alu 2 147 0 4 930 232 286 31 16 chrX 45298327 45298391 -121351905 - RSINE1 SINE B4 -17 148 84 4 930 238 246 0 30 chrX 45298403 45298470 -121351826 - ID SINE ID -139 85 21 4 930 680 59 16 1 chrX 45298571 45298678 -121351618 + B1_Mus1 SINE Alu 3 120 0 4 930 330 132 0 0 chrX 45298678 45298731 -121351565 + (A)n Simple_repeat Simple_repeat 1 53 0 4 930 259 341 55 39 chrX 45298792 45298920 -121351376 - MIRb SINE MIR -118 150 21 4 930 559 116 4 8 chrX 45299268 45299376 -121350920 + B1_Mur4 SINE Alu 15 150 0 4 930 213 204 0 0 chrX 45299954 45299998 -121350298 + B1_Mur4 SINE Alu 2 45 -105 4 930 256 320 50 62 chrX 45301846 45302006 -121348290 - MIRc SINE MIR -91 177 20 4 930 818 269 10 0 chrX 45302514 45302707 -121347589 - ID_B1 SINE B4 -27 197 3 4 930 434 200 349 36 chrX 45303300 45303581 -121346715 - Lx7 LINE L1 0 7696 7328 4 930 374 0 22 0 chrX 45303868 45303914 -121346382 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 4 930 1142 77 0 0 chrX 45303916 45304059 -121346237 - B1_Mus2 SINE Alu -4 143 1 4 930 1193 36 0 0 chrX 45304652 45304791 -121345505 - B1_Mus1 SINE Alu -9 139 1 4 930 245 276 130 20 chrX 45305588 45305688 -121344608 + PB1 SINE Alu 5 115 -12 4 930 383 182 0 0 chrX 45305707 45305773 -121344523 + ID4 SINE ID 1 66 -17 4 930 365 357 60 32 chrX 45306082 45306363 -121343933 - B4A SINE B4 -1 291 3 4 930 295 288 93 0 chrX 45306563 45306681 -121343615 - RSINE1 SINE B4 -35 130 2 4 930 286 282 14 0 chrX 45307324 45307395 -121342901 + ID4 SINE ID 11 82 -1 4 930 628 182 71 39 chrX 45308441 45308595 -121341701 + MIRb SINE MIR 47 205 -63 4 930 742 230 98 20 chrX 45309657 45309861 -121340435 - ID_B1 SINE B4 -1 223 4 4 930 244 268 0 0 chrX 45309906 45309962 -121340334 - ID4 SINE ID -5 78 23 4 930 273 29 0 0 chrX 45310254 45310288 -121340008 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 930 743 270 48 119 chrX 45310302 45310613 -121339683 + B4A SINE B4 4 292 0 5 930 411 123 23 69 chrX 45311061 45311148 -121339148 + B1_Mur4 SINE Alu 62 144 -6 5 930 255 61 0 0 chrX 45311148 45311181 -121339115 + (GA)n Simple_repeat Simple_repeat 1 33 0 5 930 1651 26 0 25 chrX 45312887 45313084 -121337212 + B2_Mm1a SINE B2 2 193 0 5 930 1827 60 4 0 chrX 45313301 45313533 -121336763 + L1Md_F2 LINE L1 6350 6582 0 5 930 628 269 0 8 chrX 45315525 45315656 -121334640 + RSINE1 SINE B4 2 131 -34 5 930 437 200 0 48 chrX 45319185 45319269 -121331027 + ID4 SINE ID 4 83 0 5 930 418 276 48 0 chrX 45319308 45319413 -121330883 + RSINE1 SINE B4 48 157 -8 5 930 446 209 135 9 chrX 45319418 45319529 -121330767 + B3A SINE B2 1 125 -73 5 930 359 279 72 0 chrX 45319683 45319794 -121330502 - PB1 SINE Alu -8 119 1 5 930 6175 83 15 10 chrX 45319809 45320420 -121329876 - L1_Mus4 LINE L1 0 6636 6028 5 930 3016 23 6 6 chrX 45320420 45320766 -121329530 + ORR1A0 LTR MaLR 1 346 0 5 930 6175 83 15 10 chrX 45320766 45321019 -121329277 - L1_Mus4 LINE L1 -609 6027 5768 5 930 10117 42 2 15 chrX 45321185 45323078 -121327218 + L1Md_F2 LINE L1 4657 6551 -31 5 930 2993 3 0 0 chrX 45323078 45323406 -121326890 + L1Md_A LINE L1 6255 6582 0 5 930 8199 35 2 29 chrX 45323406 45323465 -121326831 + L1Md_F2 LINE L1 6552 6582 0 5 930 2874 179 65 46 chrX 45324223 45325129 -121325167 + RLTR25B LTR ERVK 1 1027 -1 5 930 495 0 0 0 chrX 45325636 45325691 -121324605 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 930 372 211 62 21 chrX 45325692 45325789 -121324507 - RSINE1 SINE B4 -51 114 14 5 930 243 284 0 0 chrX 45325900 45325967 -121324329 + B1F SINE Alu 70 136 -13 5 930 566 301 38 16 chrX 45325970 45326156 -121324140 - B3A SINE B2 -1 197 8 5 930 243 133 62 62 chrX 45326595 45326659 -121323637 + MER5A DNA MER1_type 6 69 -120 5 930 405 102 0 0 chrX 45326701 45326760 -121323536 + (CTTG)n Simple_repeat Simple_repeat 1 59 0 5 930 1115 62 7 40 chrX 45326760 45326912 -121323384 - B1_Mus1 SINE Alu -1 147 1 5 930 241 144 196 72 chrX 45326985 45327082 -121323214 - MER5A DNA MER1_type 0 189 81 5 930 314 339 42 103 chrX 45327151 45327529 -121322767 - MLT1A0 LTR MaLR -10 355 1 5 930 260 238 0 87 chrX 45327539 45327569 -121322727 - MER5A DNA MER1_type -113 76 50 5 930 1154 231 26 128 chrX 45327569 45327991 -121322305 - MTE2a LTR MaLR 0 379 1 5 930 260 238 0 87 chrX 45327991 45328029 -121322267 - MER5A DNA MER1_type -140 49 14 5 930 22 0 0 0 chrX 45328174 45328196 -121322100 + AT_rich Low_complexity Low_complexity 1 22 0 5 930 209 316 104 32 chrX 45328501 45328745 -121321551 - L2c LINE L2 -9 3417 3135 5 930 203 256 0 0 chrX 45329122 45329161 -121321135 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 930 211 246 2 18 chrX 45329250 45329311 -121320985 - MIRc SINE MIR -105 157 97 5 930 241 216 0 0 chrX 45329426 45329477 -121320819 - MTEa LTR MaLR -23 356 306 5 930 489 227 215 31 chrX 45329711 45329902 -121320394 - RMER15 LTR ERVL -14 561 336 5 930 359 235 35 0 chrX 45330123 45330208 -121320088 - Lx8 LINE L1 -359 7114 7027 5 930 322 328 0 36 chrX 45330615 45330754 -121319542 + G-rich Low_complexity Low_complexity 3 136 0 5 930 1455 131 18 0 chrX 45331163 45331385 -121318911 - URR1A DNA MER1_type 0 226 1 5 930 975 212 38 10 chrX 45331863 45332072 -121318224 - B3 SINE B2 0 216 2 5 930 240 86 0 0 chrX 45332097 45332132 -121318164 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 5 930 597 318 7 0 chrX 45332177 45332325 -121317971 - RSINE1 SINE B4 -14 151 3 5 930 1378 242 133 26 chrX 45332360 45332563 -121317733 + L1MB2 LINE L1 5589 5798 -373 5 930 1681 31 0 0 chrX 45332563 45332754 -121317542 - B2_Mm1t SINE B2 -2 191 1 5 930 1378 242 133 26 chrX 45332754 45333055 -121317241 + L1MB2 LINE L1 5799 6147 -24 5 930 4758 109 53 6 chrX 45333685 45334389 -121315907 + RMER19A LTR ERVK 1 737 0 5 930 305 250 79 0 chrX 45334474 45334550 -121315746 - ID4 SINE ID 0 83 2 5 930 245 29 29 0 chrX 45334587 45334621 -121315675 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 930 735 248 19 0 chrX 45334621 45334782 -121315514 - RSINE1 SINE B4 0 165 2 5 930 2186 232 57 33 chrX 45334801 45335435 -121314861 - Lx9 LINE L1 0 7644 6996 5 930 2894 215 34 0 chrX 45335434 45336001 -121314295 + Lx9 LINE L1 6401 6986 -658 5 930 236 215 122 29 chrX 45335995 45336134 -121314162 + L1ME4a LINE L1 5814 5965 -159 5 930 751 167 0 9 chrX 45336259 45336374 -121313922 + B1_Mur3 SINE Alu 36 149 0 5 930 898 148 11 0 chrX 45336407 45336583 -121313713 + CT-rich Low_complexity Low_complexity 3 180 0 5 930 510 264 20 41 chrX 45336590 45336787 -121313509 - L1MD LINE L1 -1949 4197 4005 5 930 192 77 0 0 chrX 45336796 45336822 -121313474 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 5 930 1241 83 6 12 chrX 45336860 45337031 -121313265 - B2_Mm2 SINE B2 -25 170 1 5 930 387 219 62 10 chrX 45337045 45337180 -121313116 + L1MA4 LINE L1 5267 5419 -745 5 930 886 297 95 23 chrX 45337252 45337727 -121312569 + L1MA4 LINE L1 5388 5934 -366 5 930 459 152 0 0 chrX 45338448 45338527 -121311769 + (CACG)n Simple_repeat Simple_repeat 1 79 0 5 930 388 238 12 0 chrX 45338988 45339072 -121311224 + MLT1C LTR MaLR 1 85 -382 5 930 241 188 43 0 chrX 45339456 45339525 -121310771 + CT-rich Low_complexity Low_complexity 2 73 0 5 930 224 191 43 0 chrX 45339527 45339574 -121310722 + (TCTCTG)n Simple_repeat Simple_repeat 6 54 0 5 930 342 0 0 0 chrX 45339577 45339615 -121310681 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 930 848 151 14 14 chrX 45339615 45339756 -121310540 - B1_Mur4 SINE Alu -8 142 2 5 930 374 350 71 33 chrX 45339764 45339947 -121310349 + MamRep137 DNA TcMar? 251 440 -4 5 930 651 283 75 0 chrX 45340448 45340621 -121309675 + MER58A DNA MER1_type 22 207 -17 5 930 1098 71 0 0 chrX 45342424 45342564 -121307732 - B1_Mus1 SINE Alu -8 140 1 5 930 403 267 160 39 chrX 45343310 45343466 -121306830 - MER53 DNA hAT -2 191 17 5 930 1626 287 102 68 chrX 45343830 45344510 -121305786 + L1MA4 LINE L1 4717 5425 -422 5 930 718 259 75 10 chrX 45344510 45344709 -121305587 + B3 SINE B2 1 212 -4 5 930 1626 293 100 65 chrX 45344709 45345313 -121304983 + L1MA4 LINE L1 5426 6104 -1540 5 930 396 0 0 0 chrX 45345358 45345402 -121304894 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 930 26 0 0 0 chrX 45345440 45345466 -121304830 + AT_rich Low_complexity Low_complexity 1 26 0 5 930 486 49 0 0 chrX 45345672 45345733 -121304563 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 930 210 304 27 100 chrX 45345745 45345895 -121304401 + L2c LINE L2 3248 3386 -1 5 930 198 333 73 31 chrX 45346263 45346359 -121303937 - MIRb SINE MIR -151 117 18 5 930 240 163 0 0 chrX 45346946 45346989 -121303307 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 930 282 259 123 0 chrX 45347613 45347694 -121302602 + MIRb SINE MIR 118 208 -60 5 930 189 0 0 0 chrX 45347760 45347781 -121302515 + (TTG)n Simple_repeat Simple_repeat 2 22 0 5 930 919 148 0 7 chrX 45347786 45347929 -121302367 - B1_Mur3 SINE Alu -5 144 3 5 930 315 0 0 0 chrX 45348067 45348102 -121302194 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 930 326 336 75 26 chrX 45348124 45348362 -121301934 + MIRm SINE MIR 18 263 -5 5 930 206 196 20 61 chrX 45348978 45349027 -121301269 - L3 LINE CR1 -1327 3162 3116 5 930 399 294 50 119 chrX 45349346 45349547 -121300749 - MLT1A0 LTR MaLR -13 352 166 5 930 296 83 21 0 chrX 45349820 45349868 -121300428 + (TCTCCC)n Simple_repeat Simple_repeat 6 54 0 5 930 228 158 0 0 chrX 45350318 45350375 -121299921 + GA-rich Low_complexity Low_complexity 2 58 0 5 930 198 0 0 0 chrX 45350385 45350407 -121299889 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 930 525 177 18 38 chrX 45350430 45350545 -121299751 + PB1D10 SINE Alu 22 149 -1 5 116 533 227 50 64 chrX 45350780 45350921 -121299375 + ID_B1 SINE B4 67 205 -19 5 931 414 290 34 7 chrX 45351260 45351406 -121298890 + L2a LINE L2 2980 3129 -297 5 931 402 268 32 31 chrX 45351554 45351715 -121298581 - MIR3 SINE MIR 0 262 72 5 931 501 328 125 30 chrX 45352129 45352434 -121297862 - L2a LINE L2 -2 3424 3091 5 931 393 318 101 0 chrX 45353054 45353183 -121297113 - B1_Mus2 SINE Alu -5 142 1 5 931 541 283 101 0 chrX 45353068 45353206 -121297090 - ID_B1 SINE B4 -17 207 56 5 931 232 399 8 30 chrX 45355000 45355132 -121295164 + MIRb SINE MIR 51 179 -89 5 931 567 198 20 0 chrX 45355183 45355284 -121295012 + B3A SINE B2 1 103 -95 5 931 365 267 44 0 chrX 45355914 45356004 -121294292 - MER33 DNA MER1_type -2 322 229 5 931 284 331 68 0 chrX 45356027 45356160 -121294136 - L1MA10 LINE L1 -24 6310 6169 5 931 929 194 10 68 chrX 45356179 45356217 -121294079 - B3A SINE B2 -5 193 161 5 931 257 70 0 44 chrX 45356217 45356262 -121294034 + (CAGAGA)n Simple_repeat Simple_repeat 2 44 0 5 931 929 194 10 68 chrX 45356262 45356428 -121293868 - B3A SINE B2 -38 160 1 5 931 609 253 4 112 chrX 45356437 45356682 -121293614 - MER33 DNA MER1_type -95 229 2 5 931 350 208 14 130 chrX 45356932 45357070 -121293226 + MLT1A1 LTR MaLR 282 403 -5 5 931 378 312 44 9 chrX 45357359 45357472 -121292824 + ORR1E LTR MaLR 22 138 -221 5 931 349 348 85 52 chrX 45357472 45357738 -121292558 - MTEa LTR MaLR 0 379 105 5 931 1499 233 78 29 chrX 45357738 45358123 -121292173 + MTD LTR MaLR 1 404 -15 5 931 343 267 0 118 chrX 45358137 45358239 -121292057 - MTEa LTR MaLR -272 107 18 5 931 759 312 92 34 chrX 45360048 45360090 -121290206 - L2a LINE L2 -73 3353 3323 5 931 1246 129 104 5 chrX 45360090 45360292 -121290004 + URR1A DNA MER1_type 5 226 0 5 931 759 323 117 29 chrX 45360292 45360858 -121289438 - L2a LINE L2 -104 3322 2677 5 931 511 171 27 45 chrX 45360859 45360969 -121289327 - ORR1D1 LTR MaLR 0 374 267 5 931 262 208 208 0 chrX 45360969 45361046 -121289250 + U6 snRNA snRNA 9 101 -6 5 931 21 36 0 0 chrX 45361047 45361075 -121289221 + AT_rich Low_complexity Low_complexity 1 28 0 6 931 926 111 0 15 chrX 45361108 45361245 -121289051 - B1_Mus2 SINE Alu 0 147 13 6 931 1099 215 9 5 chrX 45361259 45361474 -121288822 + B3 SINE B2 1 216 0 6 931 279 301 109 36 chrX 45361591 45361812 -121288484 + L1ME3B LINE L1 5752 5988 -252 6 931 287 203 51 0 chrX 45361816 45361875 -121288421 + U6 snRNA snRNA 2 63 -44 6 931 270 0 0 0 chrX 45361875 45361905 -121288391 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 931 1338 175 153 21 chrX 45361946 45362273 -121288023 + ORR1D1 LTR MaLR 1 370 -4 6 931 1479 173 82 33 chrX 45362277 45362341 -121287955 + ORR1D1-int LTR MaLR 1 59 -1311 6 931 198 0 0 0 chrX 45362341 45362363 -121287933 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 6 931 2526 196 140 20 chrX 45362363 45363118 -121287178 + ORR1D1-int LTR MaLR 60 914 -456 6 931 598 203 0 33 chrX 45364265 45364387 -121285909 + PB1D9 SINE Alu 1 118 -2 6 931 613 211 39 41 chrX 45364397 45364579 -121285717 + B3A SINE B2 1 184 -11 6 931 902 182 0 0 chrX 45364590 45364733 -121285563 + B1_Mur1 SINE Alu 1 143 -6 6 931 391 246 8 0 chrX 45364734 45364824 -121285472 + ID4_ SINE ID 1 93 -59 6 931 1227 283 79 66 chrX 45364818 45365275 -121285021 - MLT1F2 LTR MaLR -57 503 41 6 931 332 280 82 87 chrX 45365598 45365829 -121284467 - MIRc SINE MIR -19 249 20 6 931 286 241 0 0 chrX 45367091 45367149 -121283147 - MIR SINE MIR -177 85 28 6 931 607 318 20 20 chrX 45367632 45367828 -121282468 + B3A SINE B2 3 198 0 6 931 932 291 69 7 chrX 45367844 45368135 -121282161 + MLT1A1 LTR MaLR 73 381 -27 6 931 1279 182 9 0 chrX 45368179 45368393 -121281903 + B3 SINE B2 1 216 0 6 931 390 329 31 43 chrX 45368632 45368794 -121281502 - RSINE1 SINE B4 -3 162 3 6 931 252 221 312 0 chrX 45368845 45368922 -121281374 - PB1D10 SINE Alu -11 106 6 6 931 224 369 31 39 chrX 45369300 45369427 -121280869 + MIRb SINE MIR 118 243 -25 6 931 190 292 96 29 chrX 45370627 45370726 -121279570 - L2c LINE L2 -1 3386 3270 6 931 353 310 0 0 chrX 45371072 45371143 -121279153 + L3 LINE CR1 4326 4396 -93 6 931 615 318 49 12 chrX 45371143 45371388 -121278908 + MIR SINE MIR 3 256 -6 6 931 718 283 107 63 chrX 45372132 45372641 -121277655 + RMER13A LTR ERVK 1 579 -48 6 931 232 167 84 41 chrX 45373615 45373700 -121276596 + MIRb SINE MIR 95 176 -92 6 931 1156 58 0 0 chrX 45373923 45374060 -121276236 + B1_Mus1 SINE Alu 2 138 -10 6 931 303 258 0 0 chrX 45374090 45374152 -121276144 - tRNA-Ala-GCA tRNA tRNA -13 62 1 6 931 207 308 0 0 chrX 45374160 45374212 -121276084 - MIRc SINE MIR -107 161 110 6 931 260 228 82 84 chrX 45374385 45374517 -121275779 + MIR3 SINE MIR 72 201 -7 6 931 327 335 18 41 chrX 45375341 45375512 -121274784 + MIRc SINE MIR 48 214 -54 6 931 402 271 18 45 chrX 45375797 45375909 -121274387 + MER58A DNA MER1_type 27 135 -89 6 931 550 310 0 0 chrX 45376731 45376886 -121273410 + RSINE1 SINE B4 5 159 -6 6 931 432 245 108 0 chrX 45376928 45377030 -121273266 + RMER30 DNA MER1_type 63 175 -27 6 931 312 300 99 25 chrX 45377496 45377686 -121272610 + MIRb SINE MIR 30 232 -36 6 931 198 333 39 29 chrX 45378281 45378383 -121271913 - L3 LINE CR1 -922 3567 3465 6 931 225 108 0 0 chrX 45379289 45379326 -121270970 + (CAG)n Simple_repeat Simple_repeat 3 39 0 6 931 215 224 17 33 chrX 45379579 45379639 -121270657 + CT-rich Low_complexity Low_complexity 1 59 0 6 931 266 291 76 19 chrX 45380001 45380106 -121270190 + MIR3 SINE MIR 86 196 -12 6 931 195 42 0 0 chrX 45380112 45380136 -121270160 + (TTGG)n Simple_repeat Simple_repeat 4 27 0 6 931 318 275 137 73 chrX 45381713 45381917 -121268379 - MamRep564 Unknown Unknown -81 276 60 6 931 513 0 0 0 chrX 45382086 45382143 -121268153 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 6 931 510 122 0 0 chrX 45384469 45384521 -121265775 + (GGA)n Simple_repeat Simple_repeat 3 54 0 6 931 1494 33 0 0 chrX 45384521 45384701 -121265595 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 6 931 510 122 0 0 chrX 45384701 45384730 -121265566 + (GGA)n Simple_repeat Simple_repeat 1 29 0 6 931 218 250 0 35 chrX 45388101 45388159 -121262137 + GA-rich Low_complexity Low_complexity 2 57 0 6 931 250 296 49 0 chrX 45389730 45389811 -121260485 + MIRc SINE MIR 153 237 -31 6 931 401 250 20 40 chrX 45390003 45390103 -121260193 - Charlie5 DNA MER1_type -2526 98 1 6 931 432 287 62 0 chrX 45390474 45390603 -121259693 + MLT1A1 LTR MaLR 25 161 -247 6 931 924 164 0 0 chrX 45390627 45390767 -121259529 - B1_Mus2 SINE Alu -7 140 1 6 931 686 259 11 23 chrX 45390803 45390977 -121259319 + MTEa LTR MaLR 18 189 -190 6 931 641 257 0 32 chrX 45391059 45391244 -121259052 + MTEa LTR MaLR 182 360 -19 6 931 597 249 0 62 chrX 45391341 45391517 -121258779 + MLT1A1 LTR MaLR 236 400 -8 6 931 202 128 0 25 chrX 45391527 45391567 -121258729 + MIRb SINE MIR 182 220 -48 6 931 276 286 0 0 chrX 45392060 45392137 -121258159 - MIR SINE MIR -10 252 176 6 931 188 212 0 0 chrX 45392176 45392209 -121258087 - MIRb SINE MIR -209 59 27 6 931 1497 133 240 4 chrX 45392225 45392504 -121257792 + Lx4A LINE L1 6713 7057 -1 6 931 24 53 0 0 chrX 45392504 45392542 -121257754 + AT_rich Low_complexity Low_complexity 1 38 0 6 931 225 175 25 0 chrX 45392542 45392582 -121257714 + GA-rich Low_complexity Low_complexity 2 42 0 6 931 1080 101 3 31 chrX 45392582 45393177 -121257119 + (GGA)n Simple_repeat Simple_repeat 1 578 0 6 931 316 373 25 6 chrX 45393323 45393485 -121256811 + MIR SINE MIR 62 226 -36 6 931 275 234 0 15 chrX 45393920 45393985 -121256311 - MIR3 SINE MIR -54 154 91 6 931 383 300 115 77 chrX 45394880 45395032 -121255264 + MTEb LTR MaLR 1 185 -194 6 931 533 297 104 34 chrX 45395032 45395300 -121254996 + B4A SINE B4 2 288 -4 6 931 383 300 115 77 chrX 45395300 45395373 -121254923 + MTEb LTR MaLR 186 250 -129 6 931 195 42 0 0 chrX 45395373 45395397 -121254899 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 931 383 300 115 77 chrX 45395397 45395535 -121254761 + MTEb LTR MaLR 251 379 0 6 931 262 361 55 9 chrX 45396419 45396528 -121253768 + L2b LINE L2 3258 3371 -4 6 931 332 192 26 0 chrX 45397999 45398077 -121252219 + (TATG)n Simple_repeat Simple_repeat 1 80 0 6 931 1654 207 56 39 chrX 45398079 45398491 -121251805 + MTD LTR MaLR 1 419 0 6 931 353 277 149 36 chrX 45398601 45398796 -121251500 - L1ME1 LINE L1 -296 5883 5667 6 931 2033 289 47 18 chrX 45398798 45399461 -121250835 - ORR1E-int LTR MaLR -897 683 2 6 931 1077 263 47 58 chrX 45399462 45399825 -121250471 - ORR1E LTR MaLR 0 359 1 6 931 1447 256 30 10 chrX 45399898 45400300 -121249996 - L1MB7 LINE L1 -18 6339 5930 6 931 315 310 17 50 chrX 45400334 45400453 -121249843 + MTE2b LTR MaLR 231 345 -34 6 931 904 275 4 63 chrX 45400642 45400894 -121249402 - B4 SINE B4 -35 257 21 6 931 895 268 92 17 chrX 45400929 45401289 -121249007 - L1MB7 LINE L1 -884 5435 5049 6 931 2095 288 140 14 chrX 45401287 45402134 -121248162 - L1MB7 LINE L1 -1755 4564 3595 6 931 303 49 0 0 chrX 45402134 45402175 -121248121 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 6 931 2095 288 140 14 chrX 45402175 45402522 -121247774 - L1MB7 LINE L1 -2725 3594 3220 6 931 253 224 14 29 chrX 45402531 45402600 -121247696 + MLT2B1 LTR ERVL 5 72 -443 6 931 350 294 160 0 chrX 45402619 45402738 -121247558 + MLT2B1 LTR ERVL 132 269 -251 6 931 256 303 50 10 chrX 45402977 45403077 -121247219 - MLT1A1 LTR MaLR -12 396 293 6 931 912 228 10 5 chrX 45403293 45403500 -121246796 + B3 SINE B2 1 208 -8 6 931 807 196 0 20 chrX 45403663 45403814 -121246482 + B1_Mur3 SINE Alu 2 149 0 6 931 328 221 0 0 chrX 45403879 45403899 -121246397 - L1MB7 LINE L1 -4956 1444 1425 6 931 2073 145 72 18 chrX 45403899 45404285 -121246011 - MTB_Mm LTR MaLR 0 407 1 6 931 328 221 0 0 chrX 45404285 45404332 -121245964 - L1MB7 LINE L1 -4976 1424 1378 6 931 514 278 101 33 chrX 45404384 45404752 -121245544 - L1MB7 LINE L1 -5225 1175 783 6 931 573 268 191 0 chrX 45404776 45404959 -121245337 + MER20 DNA MER1_type 2 219 0 6 931 329 325 0 0 chrX 45404968 45405088 -121245208 - L1MB7 LINE L1 -5647 753 634 6 931 314 314 0 19 chrX 45405136 45405243 -121245053 + GA-rich Low_complexity Low_complexity 4 108 0 6 931 484 289 47 35 chrX 45405244 45405416 -121244880 - MLT1A0 LTR MaLR -189 176 3 6 931 183 364 65 24 chrX 45406117 45406241 -121244055 + L2c LINE L2 3032 3160 -227 6 931 334 294 24 32 chrX 45406409 45406532 -121243764 + MLT1A LTR MaLR 37 158 -216 6 931 359 250 40 20 chrX 45406571 45406687 -121243609 + MLT1A LTR MaLR 259 391 -17 6 931 2175 33 11 22 chrX 45408432 45408708 -121241588 - L1Md_F3 LINE L1 -14 6570 6298 6 931 260 258 0 0 chrX 45408715 45408777 -121241519 + B3A SINE B2 17 78 -120 6 931 224 162 0 0 chrX 45409068 45409105 -121241191 - B1F2 SINE Alu -111 38 2 6 931 251 320 163 8 chrX 45409462 45409591 -121240705 + RSINE1 SINE B4 2 150 -15 6 931 306 0 0 0 chrX 45409604 45409638 -121240658 + (TTA)n Simple_repeat Simple_repeat 2 35 0 6 931 220 158 0 0 chrX 45410109 45410147 -121240149 + B2_Mm2 SINE B2 1 38 -157 6 931 1122 44 7 0 chrX 45410151 45410288 -121240008 + B1_Mm SINE Alu 1 138 -9 6 931 685 135 0 0 chrX 45410316 45410420 -121239876 + B3 SINE B2 27 130 -86 6 931 1313 239 84 12 chrX 45410561 45410904 -121239392 + MTEb LTR MaLR 5 372 -7 6 931 757 293 115 19 chrX 45411049 45411148 -121239148 + B4A SINE B4 7 104 -188 6 931 2200 129 54 6 chrX 45411148 45411498 -121238798 - ORR1B2 LTR MaLR 0 367 1 6 931 757 293 115 19 chrX 45411498 45411659 -121238637 + B4A SINE B4 105 292 0 6 931 1244 42 138 0 chrX 45411704 45411871 -121238425 - B2_Mm2 SINE B2 -4 191 2 6 931 744 221 110 5 chrX 45412259 45412450 -121237846 - B3 SINE B2 -5 211 1 6 931 759 300 64 11 chrX 45413013 45413387 -121236909 - Charlie4a DNA MER1_type -7 501 108 6 931 425 265 86 0 chrX 45413440 45413557 -121236739 + B3A SINE B2 48 174 -24 6 931 699 315 69 16 chrX 45413567 45413793 -121236503 - MLT1A0 LTR MaLR 0 365 122 6 931 1356 96 5 5 chrX 45413793 45413982 -121236314 - B2_Mm1a SINE B2 -3 190 2 6 931 699 315 69 16 chrX 45413982 45414074 -121236222 - MLT1A0 LTR MaLR -244 121 30 6 931 717 51 0 0 chrX 45414744 45414842 -121235454 + (TC)n Simple_repeat Simple_repeat 1 98 0 6 931 702 134 16 25 chrX 45414842 45414964 -121235332 - B1_Mur4 SINE Alu -13 137 17 7 931 473 171 0 0 chrX 45414960 45415042 -121235254 - MTC LTR MaLR -338 83 2 7 931 697 177 0 8 chrX 45415119 45415244 -121235052 - MTC LTR MaLR 0 421 298 7 931 335 118 0 0 chrX 45415248 45415299 -121234997 - MTC LTR MaLR -370 51 1 7 931 293 279 105 97 chrX 45415423 45415661 -121234635 + MIR SINE MIR 12 251 -11 7 931 2198 26 0 15 chrX 45416864 45417136 -121233160 - L1Md_F3 LINE L1 0 6584 6317 7 931 284 282 144 9 chrX 45417202 45417313 -121232983 - MIR SINE MIR -67 141 16 7 931 261 221 0 0 chrX 45417313 45417381 -121232915 + CT-rich Low_complexity Low_complexity 1 68 0 7 931 223 133 205 96 chrX 45417944 45418027 -121232269 + B4A SINE B4 2 93 -199 7 931 222 256 69 11 chrX 45418344 45418431 -121231865 + MIRm SINE MIR 87 178 -98 7 931 317 141 0 14 chrX 45419129 45419201 -121231095 - L1MA7 LINE L1 -1 6290 6220 7 931 335 181 14 0 chrX 45419203 45419275 -121231021 + (TA)n Simple_repeat Simple_repeat 2 74 0 7 931 529 185 111 0 chrX 45419319 45419427 -121230869 - B1_Mur1 SINE Alu -1 148 29 7 931 886 246 19 29 chrX 45419452 45419657 -121230639 - B3 SINE B2 -13 203 1 7 931 253 138 49 12 chrX 45420120 45420201 -121230095 + GA-rich Low_complexity Low_complexity 1 84 0 7 931 476 314 16 31 chrX 45420665 45420856 -121229440 + L1MC4a LINE L1 7689 7876 -6 7 931 7647 53 40 1 chrX 45420887 45421927 -121228369 - L1Md_F2 LINE L1 -3 6579 5502 7 931 363 261 55 48 chrX 45421924 45422069 -121228227 + L1ME1 LINE L1 6027 6172 -7 7 931 325 301 77 18 chrX 45422069 45422238 -121228058 + MIR SINE MIR 28 206 -56 7 931 892 288 82 64 chrX 45422249 45422687 -121227609 + MLT1D LTR MaLR 4 449 -56 7 931 254 329 51 0 chrX 45422690 45422769 -121227527 + ID4_ SINE ID 1 83 0 7 931 371 256 103 22 chrX 45422815 45423022 -121227274 + L1ME1 LINE L1 5914 6289 -45 7 931 268 187 52 26 chrX 45423038 45423115 -121227181 + MLT1D LTR MaLR 422 500 -5 7 931 859 75 7 36 chrX 45423197 45423335 -121226961 + Lx LINE L1 6521 6654 0 7 931 253 321 0 12 chrX 45423429 45423514 -121226782 + L2c LINE L2 3286 3369 -18 7 931 207 378 62 21 chrX 45423839 45424082 -121226214 - L3 LINE CR1 -703 3786 3534 7 931 285 167 0 18 chrX 45424203 45424258 -121226038 - MLT1B LTR MaLR -3 387 334 7 931 303 264 42 0 chrX 45424254 45424266 -121226030 + B4A SINE B4 71 85 -207 7 931 351 296 8 25 chrX 45424266 45424384 -121225912 + PB1D10 SINE Alu 1 116 -1 7 931 366 196 0 0 chrX 45424401 45424498 -121225798 + (TA)n Simple_repeat Simple_repeat 2 98 0 7 931 240 283 17 0 chrX 45424512 45424572 -121225724 + ID2 SINE ID 7 67 -16 7 931 263 316 21 10 chrX 45424621 45424717 -121225579 - MLT1C LTR MaLR -71 396 300 7 931 661 136 7 7 chrX 45424749 45424850 -121225446 + (TC)n Simple_repeat Simple_repeat 1 101 0 7 931 357 24 0 0 chrX 45424850 45424892 -121225404 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 931 661 136 7 7 chrX 45424892 45424945 -121225351 + (TC)n Simple_repeat Simple_repeat 1 54 0 7 931 262 229 0 32 chrX 45424946 45425009 -121225287 - ID4_ SINE ID -18 65 5 7 931 284 252 146 0 chrX 45425277 45425400 -121224896 - MER5A1 DNA MER1_type -25 141 1 7 931 730 242 49 62 chrX 45425692 45425917 -121224379 + ID_B1 SINE B4 2 223 -1 7 931 329 277 71 9 chrX 45426309 45426422 -121223874 - MIRc SINE MIR -79 189 70 7 931 1074 69 10 113 chrX 45427442 45427637 -121222659 - B2_Mm1t SINE B2 -3 190 16 7 931 212 314 40 32 chrX 45427817 45427942 -121222354 + MIR3 SINE MIR 6 131 -77 7 931 250 311 111 123 chrX 45428277 45428636 -121221660 - MLT1A LTR MaLR -7 367 13 7 931 261 0 0 0 chrX 45428637 45428666 -121221630 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 931 360 252 0 29 chrX 45428921 45429023 -121221273 - MLT1A1 LTR MaLR 0 408 310 7 931 349 172 22 54 chrX 45429049 45429141 -121221155 - RLTR14 LTR ERV1 -8 374 286 7 931 1408 75 32 0 chrX 45429427 45429615 -121220681 - B2_Mm2 SINE B2 -1 194 1 7 931 344 260 56 61 chrX 45429645 45429825 -121220471 - MLT1A1 LTR MaLR -177 197 19 7 931 360 0 0 0 chrX 45429972 45430012 -121220284 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 7 931 531 298 46 36 chrX 45430826 45431021 -121219275 + B3A SINE B2 1 197 -1 7 931 1553 58 11 0 chrX 45431351 45431541 -121218755 - B2_Mm1t SINE B2 0 193 2 7 931 180 0 0 0 chrX 45431555 45431575 -121218721 + (A)n Simple_repeat Simple_repeat 1 20 0 7 931 203 276 105 0 chrX 45432864 45432940 -121217356 - L2a LINE L2 -2 3424 3341 7 931 419 302 79 0 chrX 45432955 45433081 -121217215 + B1F1 SINE Alu 9 144 -5 7 931 837 99 0 0 chrX 45433082 45433203 -121217093 + (GGAA)n Simple_repeat Simple_repeat 1 121 0 7 931 848 346 49 21 chrX 45433894 45434222 -121216074 + LTR16B1 LTR ERVL 31 367 -113 7 931 234 297 27 13 chrX 45434389 45434464 -121215832 + ORR1E LTR MaLR 63 138 -221 7 931 1564 36 0 45 chrX 45434506 45434707 -121215589 - B2_Mm1a SINE B2 0 193 2 7 931 503 256 123 18 chrX 45434863 45434882 -121215414 - MTEb LTR MaLR -199 180 164 7 931 299 85 0 21 chrX 45434882 45434930 -121215366 + (TTA)n Simple_repeat Simple_repeat 3 49 0 7 931 503 256 123 18 chrX 45434930 45435073 -121215223 - MTEb LTR MaLR -216 163 1 7 931 360 358 30 87 chrX 45436139 45436678 -121213618 + L2 LINE L2 2260 2767 -652 7 931 1518 73 5 0 chrX 45436799 45436990 -121213306 + B2_Mm1t SINE B2 2 193 0 7 931 378 159 0 0 chrX 45437003 45437072 -121213224 + (CA)n Simple_repeat Simple_repeat 2 70 0 7 931 358 306 182 16 chrX 45437075 45437394 -121212902 + L1ME1 LINE L1 807 1178 -5909 7 931 326 289 30 40 chrX 45437752 45437853 -121212443 - PB1D10 SINE Alu -8 109 10 7 931 234 255 29 48 chrX 45437864 45437967 -121212329 + L1ME1 LINE L1 1626 1726 -5608 7 931 672 251 41 6 chrX 45437999 45438171 -121212125 + B3A SINE B2 1 178 -20 7 931 396 0 0 0 chrX 45438183 45438227 -121212069 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 931 252 122 0 0 chrX 45438233 45438274 -121212022 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 931 250 280 26 13 chrX 45438325 45438401 -121211895 + L1MB7 LINE L1 6041 6117 -67 7 931 369 0 0 0 chrX 45438402 45438443 -121211853 + (TTTC)n Simple_repeat Simple_repeat 3 43 0 7 931 264 196 18 0 chrX 45438551 45438607 -121211689 + L1MB8 LINE L1 6110 6166 -12 7 931 468 272 55 51 chrX 45438704 45438988 -121211308 + L1ME1 LINE L1 2029 2326 -4776 7 931 328 287 28 9 chrX 45439007 45439116 -121211180 + L1ME1 LINE L1 2458 2568 -4519 7 931 226 349 0 34 chrX 45439205 45439282 -121211014 + PB1D10 SINE Alu 1 76 -41 7 931 1241 92 34 6 chrX 45439282 45439457 -121210839 + B2_Mm1t SINE B2 1 180 -13 7 931 226 349 0 34 chrX 45439457 45439468 -121210828 + PB1D10 SINE Alu 77 86 -31 7 931 411 295 52 46 chrX 45439482 45439656 -121210640 + ID_B1 SINE B4 40 214 -10 7 931 854 191 14 0 chrX 45439680 45439821 -121210475 + B1_Mur3 SINE Alu 1 143 -6 7 931 792 121 333 13 chrX 45439844 45440003 -121210293 + B3 SINE B2 1 210 -6 7 931 1356 296 6 0 chrX 45440099 45440461 -121209835 + L1ME1 LINE L1 3307 3670 -3336 7 931 520 264 24 142 chrX 45440458 45440882 -121209414 + L1ME1 LINE L1 6503 6876 -163 7 931 507 381 32 35 chrX 45440942 45441255 -121209041 - FordPrefect_a DNA Tip100 -1 507 196 7 931 1664 116 47 0 chrX 45441266 45441524 -121208772 + MTC LTR MaLR 28 297 -124 7 931 462 149 0 0 chrX 45441528 45441602 -121208694 - B1_Mus1 SINE Alu -73 75 2 7 931 826 234 124 12 chrX 45441992 45442234 -121208062 + B4 SINE B4 1 269 -23 7 931 350 273 0 57 chrX 45442326 45442431 -121207865 + B1_Mur1 SINE Alu 48 146 -3 7 931 180 279 0 0 chrX 45442856 45442899 -121207397 - MIRb SINE MIR -68 200 158 7 931 534 265 13 26 chrX 45442943 45443094 -121207202 - B1F SINE Alu 0 149 1 7 931 396 0 0 0 chrX 45443443 45443487 -121206809 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 931 487 156 78 0 chrX 45444502 45444592 -121205704 - B1_Mur1 SINE Alu -14 135 39 7 931 252 268 89 40 chrX 45444638 45444739 -121205557 - RMER12 LTR ERVK -474 848 743 7 931 189 173 33 133 chrX 45445105 45445165 -121205131 + MIRm SINE MIR 193 246 -30 7 931 407 262 131 60 chrX 45445715 45445835 -121204461 - MIRb SINE MIR -30 238 124 7 931 495 0 0 0 chrX 45445835 45445890 -121204406 + (GA)n Simple_repeat Simple_repeat 2 56 0 7 931 407 262 131 60 chrX 45445890 45445952 -121204344 - MIRb SINE MIR -145 123 44 7 931 469 277 21 0 chrX 45446124 45446218 -121204078 + ID_B1 SINE B4 5 100 -124 7 931 694 270 52 92 chrX 45446317 45446566 -121203730 - MIR SINE MIR -20 242 4 7 931 227 319 115 0 chrX 45446715 45446828 -121203468 + MIR SINE MIR 60 185 -77 7 931 233 204 0 22 chrX 45447155 45447200 -121203096 - L3b LINE CR1 -247 235 192 7 931 306 73 0 0 chrX 45447695 45447736 -121202560 + (TTG)n Simple_repeat Simple_repeat 2 42 0 7 931 840 208 0 0 chrX 45447736 45447880 -121202416 - B1_Mur4 SINE Alu -6 144 1 7 931 252 0 0 0 chrX 45447932 45447960 -121202336 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 7 931 1018 180 57 21 chrX 45447961 45448154 -121202142 - B3 SINE B2 -15 201 2 7 931 673 244 44 33 chrX 45448211 45448393 -121201903 - B3A SINE B2 -14 184 1 7 931 1147 223 0 14 chrX 45448425 45448639 -121201657 + B3 SINE B2 5 215 -1 7 931 22 0 0 0 chrX 45448640 45448662 -121201634 + AT_rich Low_complexity Low_complexity 1 22 0 7 931 459 304 54 85 chrX 45448688 45448704 -121201592 - B3 SINE B2 0 216 200 7 931 225 0 0 0 chrX 45448704 45448729 -121201567 + (TG)n Simple_repeat Simple_repeat 1 25 0 7 931 518 301 17 59 chrX 45448729 45448935 -121201361 - B3A SINE B2 -17 199 1 7 931 341 22 22 0 chrX 45449020 45449066 -121201230 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 931 724 222 53 31 chrX 45449073 45449301 -121200995 - L1MA4 LINE L1 -368 5932 5700 7 931 680 273 0 0 chrX 45449799 45449949 -121200347 + RSINE1 SINE B4 2 151 -14 8 931 453 133 0 0 chrX 45451494 45451569 -121198727 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 8 931 257 349 18 18 chrX 45452001 45452112 -121198184 + L2a LINE L2 3313 3423 -3 8 931 567 250 109 7 chrX 45452631 45452768 -121197528 - RSINE1 SINE B4 -4 161 11 8 931 1505 162 170 25 chrX 45452757 45452906 -121197390 - RMER10B LTR ERVL -27 371 221 8 931 369 0 0 0 chrX 45452906 45452947 -121197349 + (GA)n Simple_repeat Simple_repeat 2 42 0 8 931 1505 162 170 25 chrX 45452947 45453120 -121197176 - RMER10B LTR ERVL -178 220 2 8 931 665 343 51 14 chrX 45453518 45453734 -121196562 - MIRb SINE MIR -11 257 34 8 931 227 321 5 118 chrX 45454039 45454226 -121196070 - L2 LINE L2 -1016 2403 2238 8 931 413 267 0 17 chrX 45454243 45454361 -121195935 - PB1D10 SINE Alu 0 117 2 8 931 341 287 46 0 chrX 45454833 45454941 -121195355 + MLT1A LTR MaLR 1 113 -261 8 931 1211 238 46 30 chrX 45454983 45455286 -121195010 - MTEa LTR MaLR 0 379 72 8 931 214 281 17 17 chrX 45455383 45455441 -121194855 - L2 LINE L2 -1398 2021 1964 8 931 180 0 0 0 chrX 45455469 45455489 -121194807 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 8 931 489 385 92 37 chrX 45455513 45455947 -121194349 + L1M5 LINE L1 4559 5016 -1130 8 931 306 73 0 0 chrX 45455947 45455988 -121194308 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 931 332 284 195 0 chrX 45456101 45456291 -121194005 + L1M5 LINE L1 5461 5687 -437 8 931 501 144 9 19 chrX 45456444 45456550 -121193746 + A-rich Low_complexity Low_complexity 2 106 0 8 931 236 283 21 52 chrX 45456657 45456754 -121193542 - L2a LINE L2 0 3426 3333 8 931 888 310 31 79 chrX 45456912 45457126 -121193170 + B4A SINE B4 9 220 -72 8 931 399 312 23 75 chrX 45457126 45457299 -121192997 + RSINE1 SINE B4 2 165 0 8 931 888 310 31 79 chrX 45457299 45457375 -121192921 + B4A SINE B4 221 285 -7 8 931 396 0 0 0 chrX 45457390 45457434 -121192862 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 931 234 174 0 0 chrX 45458327 45458373 -121191923 + GA-rich Low_complexity Low_complexity 1 46 0 8 931 251 321 24 47 chrX 45458656 45458689 -121191607 - ID_B1 SINE B4 -131 93 11 8 931 283 231 0 0 chrX 45458689 45458741 -121191555 - ID4_ SINE ID -21 62 11 8 931 210 150 0 0 chrX 45458742 45458782 -121191514 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 931 1160 82 0 0 chrX 45459068 45459214 -121191082 - B1_Mus2 SINE Alu 0 147 2 8 931 355 132 13 26 chrX 45459242 45459320 -121190976 + (TTTG)n Simple_repeat Simple_repeat 3 79 0 8 931 314 133 32 32 chrX 45460072 45460134 -121190162 - MIR SINE MIR -65 143 82 8 931 752 274 156 18 chrX 45460523 45460805 -121189491 - Lx8 LINE L1 0 7473 7153 8 931 428 271 0 0 chrX 45460899 45460984 -121189312 + PB1D10 SINE Alu 1 85 -32 8 931 249 57 0 0 chrX 45460989 45461024 -121189272 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 8 931 1074 122 0 0 chrX 45461025 45461173 -121189123 - B1_Mus1 SINE Alu 0 148 1 8 931 396 0 0 0 chrX 45461358 45461402 -121188894 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 931 934 275 65 44 chrX 45462562 45462989 -121187307 - MER31A LTR ERV1 -6 460 38 8 931 222 174 0 42 chrX 45463539 45463587 -121186709 + L2a LINE L2 3377 3422 -4 8 931 429 215 32 0 chrX 45464214 45464307 -121185989 - ID_B1 SINE B4 -3 221 126 8 931 288 320 114 30 chrX 45464217 45464349 -121185947 - B1F SINE Alu -6 143 1 8 931 197 100 0 0 chrX 45464370 45464400 -121185896 + L2c LINE L2 3342 3371 -16 8 931 21 36 0 0 chrX 45464570 45464598 -121185698 + AT_rich Low_complexity Low_complexity 1 28 0 8 931 1225 59 0 0 chrX 45465428 45465580 -121184716 + B2_Mm2 SINE B2 3 154 -41 8 931 318 80 0 0 chrX 45465581 45465631 -121184665 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 8 931 295 264 42 76 chrX 45465656 45465775 -121184521 + URR1B DNA MER1_type 110 224 -1 8 931 358 321 36 102 chrX 45466015 45466158 -121184138 + Charlie16a DNA MER1_type 56 182 -160 8 931 294 29 0 0 chrX 45466158 45466193 -121184103 + (CAAG)n Simple_repeat Simple_repeat 2 36 0 8 931 358 321 36 102 chrX 45466193 45466323 -121183973 + Charlie16a DNA MER1_type 183 311 -31 8 931 538 237 48 91 chrX 45466351 45466537 -121183759 + MER53 DNA hAT 16 193 0 8 931 2947 54 85 3 chrX 45467110 45467287 -121183009 - BGLII_Mus LTR ERVK -1 421 245 8 931 874 56 0 16 chrX 45467287 45467414 -121182882 + (TTC)n Simple_repeat Simple_repeat 3 127 0 8 931 2947 54 85 3 chrX 45467414 45467625 -121182671 - BGLII_Mus LTR ERVK -178 244 1 8 931 496 301 81 0 chrX 45467744 45467867 -121182429 + RSINE1 SINE B4 2 134 -31 8 931 513 104 0 0 chrX 45467873 45467950 -121182346 + (CA)n Simple_repeat Simple_repeat 2 78 0 8 931 761 272 38 20 chrX 45468453 45468726 -121181570 - MER2 DNA MER2_type -52 293 1 8 931 318 218 0 0 chrX 45471181 45471236 -121179060 + ID4_ SINE ID 21 75 -8 8 931 274 360 17 50 chrX 45471182 45471302 -121178994 + ID_B1 SINE B4 23 138 -86 8 931 972 203 14 19 chrX 45472002 45472213 -121178083 - B3 SINE B2 -5 211 2 8 931 600 231 100 0 chrX 45473304 45473434 -121176862 - B1F SINE Alu 0 149 7 8 931 1320 180 56 11 chrX 45473451 45473721 -121176575 + L1MB7 LINE L1 5858 6139 -45 8 931 1206 55 7 0 chrX 45474028 45474174 -121176122 + B1_Mus2 SINE Alu 1 147 0 8 931 458 192 20 10 chrX 45474266 45474366 -121175930 + MIRb SINE MIR 50 150 -118 8 931 288 328 60 60 chrX 45474564 45474697 -121175599 - MIR SINE MIR -46 216 84 8 931 336 102 0 0 chrX 45476396 45476445 -121173851 + (GGA)n Simple_repeat Simple_repeat 2 50 0 8 931 286 342 94 26 chrX 45476502 45476694 -121173602 + MIRb SINE MIR 3 211 -57 8 931 362 247 27 161 chrX 45477359 45477620 -121172676 - L1MC5 LINE L1 -45 7916 7691 8 931 260 296 44 44 chrX 45478589 45478702 -121171594 - MER76 LTR ERVL -234 457 345 8 931 246 125 0 0 chrX 45478947 45478995 -121171301 + (T)n Simple_repeat Simple_repeat 1 48 0 8 931 593 294 53 21 chrX 45479052 45479229 -121171067 - ID_B1 SINE B4 -1 223 39 8 931 405 102 0 0 chrX 45481361 45481420 -121168876 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 8 931 741 53 0 0 chrX 45481546 45481640 -121168656 + (TTTC)n Simple_repeat Simple_repeat 4 97 0 8 931 416 282 0 0 chrX 45481640 45481743 -121168553 - PB1D10 SINE Alu -14 103 1 8 932 301 254 29 35 chrX 45482002 45482124 -121168172 - MIR3 SINE MIR -41 167 51 8 932 242 288 0 17 chrX 45482664 45482724 -121167572 + PB1D10 SINE Alu 36 94 -23 8 932 388 293 90 8 chrX 45483380 45483514 -121166782 - MIR3 SINE MIR -51 157 13 8 932 548 304 22 0 chrX 45484589 45484727 -121165569 - ID_B1 SINE B4 -4 220 80 8 932 261 225 55 184 chrX 45485303 45485412 -121164884 + MER5B DNA MER1_type 7 101 -77 8 932 189 128 25 25 chrX 45485428 45485468 -121164828 + MER5B DNA MER1_type 16 55 -123 8 932 341 304 121 67 chrX 45485489 45485937 -121164359 + L1M5 LINE L1 4399 4870 -1276 8 932 2211 66 14 3 chrX 45486303 45486593 -121163703 + L1_Mus1 LINE L1 6225 6517 -50 8 932 1394 75 38 0 chrX 45486657 45486843 -121163453 + B2_Mm2 SINE B2 2 194 -1 8 932 234 271 128 6 chrX 45486890 45487046 -121163250 + L1M5 LINE L1 5255 5429 -2453 8 932 183 80 0 0 chrX 45487143 45487168 -121163128 + (TATATG)n Simple_repeat Simple_repeat 2 26 0 8 932 631 321 25 26 chrX 45487173 45487506 -121162790 + L1M5 LINE L1 5454 5790 -2092 8 932 662 247 48 7 chrX 45487537 45487684 -121162612 + B3 SINE B2 1 153 -63 8 932 442 241 211 0 chrX 45487698 45487831 -121162465 + ID_B1 SINE B4 51 211 -13 8 932 512 15 15 0 chrX 45487831 45487896 -121162400 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 8 932 225 306 182 0 chrX 45488575 45488696 -121161600 + MIR3 SINE MIR 35 177 -31 8 932 252 304 41 68 chrX 45489847 45490021 -121160275 - MIRb SINE MIR -91 177 7 8 932 443 342 92 67 chrX 45490625 45490907 -121159389 + B4A SINE B4 1 289 -3 8 932 186 257 171 68 chrX 45491174 45491291 -121159005 - MIR SINE MIR -116 146 18 8 932 285 235 94 75 chrX 45491842 45491948 -121158348 + MIR SINE MIR 33 140 -68 8 932 284 138 12 70 chrX 45492127 45492213 -121158083 + CT-rich Low_complexity Low_complexity 4 84 0 8 932 305 292 0 70 chrX 45492373 45492487 -121157809 + MER45R DNA Tip100 2 107 -1474 8 932 360 231 44 0 chrX 45492531 45492622 -121157674 - ID_B1 SINE B4 0 224 130 8 932 252 276 0 38 chrX 45492723 45492802 -121157494 - MIRb SINE MIR -146 122 47 8 932 742 163 8 0 chrX 45492844 45492967 -121157329 - ORR1C2 LTR MaLR -51 333 210 8 932 295 81 0 61 chrX 45492994 45493060 -121157236 + (CAGA)n Simple_repeat Simple_repeat 2 63 0 8 932 265 261 111 3 chrX 45493208 45493319 -121156977 - PB1D7 SINE Alu -26 123 5 8 932 407 259 97 18 chrX 45493343 45493457 -121156839 - B1F SINE Alu -1 148 26 8 932 286 104 0 56 chrX 45494347 45494418 -121155878 + (TCTCTG)n Simple_repeat Simple_repeat 2 68 0 8 932 421 278 76 38 chrX 45495570 45495701 -121154595 + MIR SINE MIR 10 145 -117 8 932 226 229 0 126 chrX 45496398 45496493 -121153803 + MLT1J-int LTR MaLR 629 711 -676 8 932 786 322 12 29 chrX 45497885 45498128 -121152168 + B4A SINE B4 3 241 -51 8 932 328 222 235 0 chrX 45498235 45498316 -121151980 + PB1D10 SINE Alu 2 101 -16 8 932 238 270 0 13 chrX 45498369 45498444 -121151852 - L1MA10 LINE L1 -85 6249 6176 8 932 216 182 0 0 chrX 45498792 45498836 -121151460 + (CAT)n Simple_repeat Simple_repeat 2 45 0 8 932 194 238 111 0 chrX 45501846 45501909 -121148387 + MIR SINE MIR 81 150 -58 1 932 536 312 155 5 chrX 45503180 45503373 -121146923 + ID_B1 SINE B4 2 223 -1 2 932 297 337 61 56 chrX 45503792 45503990 -121146306 + MIRb SINE MIR 50 248 -20 3 932 1295 121 10 10 chrX 45504166 45504358 -121145938 + B2_Mm1t SINE B2 1 192 -1 4 932 327 140 0 0 chrX 45504358 45504410 -121145886 + (GGAA)n Simple_repeat Simple_repeat 4 55 0 5 932 1108 102 0 0 chrX 45504534 45504681 -121145615 + B1_Mus1 SINE Alu 2 148 0 6 932 189 196 0 0 chrX 45504681 45504727 -121145569 + A-rich Low_complexity Low_complexity 1 46 0 7 932 290 292 70 62 chrX 45504783 45505024 -121145272 - L1ME3A LINE L1 -200 5973 5731 8 932 271 331 122 0 chrX 45505161 45505309 -121144987 - MIR SINE MIR -31 231 66 9 932 459 0 0 0 chrX 45505703 45505754 -121144542 + (TATG)n Simple_repeat Simple_repeat 2 52 0 1 932 182 37 0 36 chrX 45506286 45506314 -121143982 + (GAAA)n Simple_repeat Simple_repeat 1 27 0 1 932 785 264 43 28 chrX 45508653 45508975 -121141321 - Tigger5 DNA MER2_type -2164 242 33 1 932 455 312 0 0 chrX 45508983 45509111 -121141185 + B3A SINE B2 5 132 -66 1 932 329 206 27 0 chrX 45509365 45509438 -121140858 + MER63D DNA AcHobo 9 83 -978 1 932 279 306 0 0 chrX 45509462 45509524 -121140772 + ID4_ SINE ID 18 79 -4 1 932 303 110 12 47 chrX 45509534 45509620 -121140676 + (CAGAGA)n Simple_repeat Simple_repeat 2 84 0 1 932 237 174 65 0 chrX 45509667 45509713 -121140583 - MTC LTR MaLR 0 421 373 1 932 638 183 30 8 chrX 45509711 45509843 -121140453 - MTB LTR MaLR -265 135 1 1 932 194 247 122 11 chrX 45510435 45510525 -121139771 - MIRc SINE MIR -120 148 49 1 932 399 208 88 10 chrX 45510886 45510988 -121139308 - MIRc SINE MIR -65 203 94 2 932 224 272 16 58 chrX 45511488 45511609 -121138687 + MIRc SINE MIR 18 133 -135 2 932 616 99 0 0 chrX 45515590 45515681 -121134615 + BC1_Mm scRNA scRNA 1 91 -61 2 932 955 226 14 38 chrX 45515688 45515900 -121134396 - B3 SINE B2 -7 209 3 2 932 494 236 47 9 chrX 45516488 45516617 -121133679 + B1F SINE Alu 3 146 -3 2 932 295 239 14 40 chrX 45516662 45516736 -121133560 + ID4 SINE ID 8 79 -4 2 932 315 320 20 10 chrX 45517382 45517483 -121132813 + MIRb SINE MIR 38 139 -129 2 932 700 162 86 22 chrX 45517499 45517638 -121132658 + B1_Mur2 SINE Alu 2 149 0 2 932 988 166 115 5 chrX 45519399 45519599 -121130697 - URR1A DNA MER1_type -4 222 1 2 932 201 387 19 0 chrX 45519718 45519824 -121130472 + MIRb SINE MIR 1 108 -160 2 932 1448 64 43 0 chrX 45520057 45520244 -121130052 + B2_Mm2 SINE B2 1 195 0 3 932 749 267 10 67 chrX 45520282 45520491 -121129805 + B3A SINE B2 1 197 -1 3 932 417 270 196 53 chrX 45520668 45520782 -121129514 + L1ME4a LINE L1 5311 5415 -709 3 932 2217 58 180 12 chrX 45520782 45521116 -121129180 - RLTR10 LTR ERVK 0 390 1 3 932 417 270 196 53 chrX 45521116 45521435 -121128861 + L1ME4a LINE L1 5416 5805 -319 3 932 279 346 0 0 chrX 45521500 45521581 -121128715 + ID4_ SINE ID 2 82 -1 3 932 223 178 0 0 chrX 45521582 45521627 -121128669 + (TAA)n Simple_repeat Simple_repeat 1 45 0 3 932 226 246 29 44 chrX 45521672 45521740 -121128556 + L1ME4a LINE L1 5976 6042 -82 3 932 257 266 54 18 chrX 45521887 45521998 -121128298 - MER20B DNA MER1_type -24 759 645 3 932 620 238 35 12 chrX 45522041 45522211 -121128085 - MER2 DNA MER2_type -85 260 87 3 932 963 128 0 45 chrX 45522217 45522373 -121127923 - B1_Mur4 SINE Alu 0 150 2 3 932 470 319 113 28 chrX 45522426 45522781 -121127515 - MER20B DNA MER1_type -134 649 265 3 932 261 0 0 0 chrX 45524098 45524127 -121126169 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 932 324 0 0 0 chrX 45524367 45524403 -121125893 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 932 393 22 0 0 chrX 45524474 45524520 -121125776 + (GA)n Simple_repeat Simple_repeat 1 46 0 4 932 240 209 68 60 chrX 45524831 45524948 -121125348 - MamRep434 DNA TcMar -247 179 62 4 932 1017 40 0 0 chrX 45525584 45525710 -121124586 + (GGAGA)n Simple_repeat Simple_repeat 1 126 0 4 932 795 172 191 48 chrX 45527249 45527438 -121122858 - B3 SINE B2 0 216 1 4 932 413 291 76 35 chrX 45527635 45527916 -121122380 + L1MB8 LINE L1 4203 4511 -1629 4 932 462 267 0 0 chrX 45528057 45528333 -121121963 + (TG)n Simple_repeat Simple_repeat 1 276 0 4 932 408 267 0 0 chrX 45528395 45528734 -121121562 + (TG)n Simple_repeat Simple_repeat 1 339 0 4 932 1808 268 44 30 chrX 45528795 45529406 -121120890 + L1MB8 LINE L1 4507 5126 -1020 4 932 794 246 5 24 chrX 45529436 45529524 -121120772 + B4 SINE B4 2 85 -207 4 932 345 254 66 86 chrX 45529524 45529675 -121120621 + B1_Mur3 SINE Alu 1 148 -1 4 932 229 219 37 110 chrX 45529709 45529791 -121120505 + B4 SINE B4 217 292 0 4 932 1244 222 96 42 chrX 45529805 45530190 -121120106 + L1MB8 LINE L1 5324 5729 -455 4 932 370 319 21 28 chrX 45530191 45530336 -121119960 + RSINE1 SINE B4 22 165 0 4 932 317 290 65 0 chrX 45530361 45530499 -121119797 + L1MB8 LINE L1 5726 5872 -306 4 932 294 188 31 0 chrX 45530654 45530718 -121119578 + L1MB8 LINE L1 6111 6176 -2 5 932 208 349 0 0 chrX 45530981 45531064 -121119232 + L2a LINE L2 3344 3426 0 5 932 228 294 15 0 chrX 45531871 45531939 -121118357 + L1MB8 LINE L1 6070 6138 -36 4 932 272 264 55 4 chrX 45531939 45532046 -121118250 + B1_Mus1 SINE Alu 9 119 -1 5 932 401 226 103 62 chrX 45532127 45532273 -121118023 + RSINE1 SINE B4 2 153 -12 5 932 591 209 237 19 chrX 45532383 45532598 -121117698 + Lx7 LINE L1 7060 7321 -375 5 932 283 303 68 53 chrX 45532620 45532826 -121117470 + Lx7 LINE L1 7472 7680 -16 5 932 426 62 0 15 chrX 45532858 45532924 -121117372 + B2_Mm1t SINE B2 120 184 -9 5 932 1201 36 0 0 chrX 45533021 45533159 -121117137 + B1_Mus1 SINE Alu 2 139 -9 5 932 233 29 29 0 chrX 45533159 45533193 -121117103 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 932 353 329 20 34 chrX 45533387 45533535 -121116761 - B1F1 SINE Alu -1 148 3 5 932 5217 37 0 5 chrX 45533656 45534281 -121116015 + L1Md_F2 LINE L1 5960 6581 -1 5 932 381 22 0 0 chrX 45535372 45535418 -121114878 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 932 361 306 65 0 chrX 45536405 45536529 -121113767 + B4 SINE B4 72 203 -89 6 932 684 176 24 0 chrX 45536433 45536558 -121113738 + B1_Mur1 SINE Alu 17 144 -5 6 932 396 200 0 0 chrX 45536558 45536648 -121113648 + GA-rich Low_complexity Low_complexity 1 90 0 6 932 261 0 0 0 chrX 45536671 45536700 -121113596 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 932 1217 22 0 0 chrX 45536700 45536839 -121113457 - B1_Mus2 SINE Alu -8 139 1 6 932 691 170 118 0 chrX 45536890 45537043 -121113253 + MT2A LTR ERVL 1 171 -362 6 932 651 208 0 30 chrX 45537057 45537191 -121113105 + MT2A LTR ERVL 286 415 -118 6 932 228 35 0 0 chrX 45537403 45537432 -121112864 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 932 244 210 15 46 chrX 45537835 45537900 -121112396 + 4.5SRNA scRNA scRNA 26 88 -6 6 932 568 186 0 26 chrX 45537842 45537958 -121112338 + B1_Mur3 SINE Alu 36 148 -1 6 932 410 301 19 13 chrX 45537995 45538153 -121112143 + RSINE1 SINE B4 3 161 -4 7 932 470 241 79 70 chrX 45538391 45538605 -121111691 + MLT1B LTR MaLR 121 336 -54 7 932 440 172 86 0 chrX 45538876 45538969 -121111327 + B1_Mur1 SINE Alu 49 149 0 7 932 587 181 184 76 chrX 45539029 45539214 -121111082 + B3 SINE B2 12 216 0 7 932 536 292 56 124 chrX 45539242 45539334 -121110962 + B4A SINE B4 5 83 -209 7 932 957 211 49 5 chrX 45539334 45539539 -121110757 + B3 SINE B2 3 216 0 7 932 536 292 56 124 chrX 45539539 45539696 -121110600 + B4A SINE B4 84 237 -55 7 932 1176 35 21 0 chrX 45539715 45539858 -121110438 + B1_Mus1 SINE Alu 2 147 -1 7 932 244 339 16 62 chrX 45539914 45540043 -121110253 + RSINE1 SINE B4 43 165 0 7 932 201 154 0 0 chrX 45540043 45540082 -121110214 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 932 1044 231 78 31 chrX 45540114 45540436 -121109860 + L1MA4 LINE L1 5559 5895 -405 7 932 1154 178 9 27 chrX 45540849 45541068 -121109228 + B3 SINE B2 2 216 0 8 932 436 244 1 69 chrX 45541169 45541302 -121108994 + B4 SINE B4 77 200 -92 8 932 685 208 254 26 chrX 45541431 45541663 -121108633 + RMER1C Other Other 1050 1334 -8 8 932 1163 88 0 0 chrX 45541706 45541853 -121108443 + B1_Mus2 SINE Alu 1 147 0 8 932 441 0 0 0 chrX 45541888 45541937 -121108359 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 932 868 241 101 0 chrX 45542103 45542310 -121107986 + Lx8 LINE L1 6884 7111 -362 8 932 923 104 13 53 chrX 45542338 45542490 -121107806 + B1_Mur4 SINE Alu 2 147 -3 8 932 197 108 0 26 chrX 45542508 45542546 -121107750 + (CCA)n Simple_repeat Simple_repeat 1 37 0 8 932 189 0 0 0 chrX 45542544 45542565 -121107731 + (CAA)n Simple_repeat Simple_repeat 1 21 0 8 932 729 258 110 63 chrX 45542568 45542886 -121107410 + Lx8 LINE L1 7140 7472 -1 8 932 841 194 0 0 chrX 45543041 45543185 -121107111 + B1_Mur2 SINE Alu 1 144 -5 8 932 973 180 71 10 chrX 45543203 45543399 -121106897 - B3 SINE B2 0 216 9 9 932 378 280 51 0 chrX 45543925 45544043 -121106253 + MIRb SINE MIR 125 248 -20 9 932 778 185 0 7 chrX 45544857 45544993 -121105303 + B1_Mur1 SINE Alu 6 140 -9 9 932 279 0 0 0 chrX 45544994 45545025 -121105271 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 932 408 318 0 0 chrX 45545219 45545351 -121104945 + ID_B1 SINE B4 91 222 -2 9 932 704 207 184 0 chrX 45545462 45545641 -121104655 + B3 SINE B2 1 212 -4 9 932 354 228 188 45 chrX 45545688 45545821 -121104475 + RSINE1 SINE B4 4 155 -10 9 932 293 298 34 62 chrX 45546002 45546181 -121104115 - L1M5 LINE L1 -451 5673 5500 9 932 276 233 0 131 chrX 45546842 45546855 -121103441 + ID4_ SINE ID 2 74 -9 9 932 289 150 0 155 chrX 45546855 45546926 -121103370 + tRNA-Ala-GCY_ tRNA tRNA 9 68 -7 9 932 385 264 48 138 chrX 45547325 45547492 -121102804 + Charlie4z DNA MER1_type 1 152 -15 1 932 420 20 0 0 chrX 45547933 45547982 -121102314 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 932 1470 63 10 5 chrX 45548099 45548306 -121101990 + L1_Mus3 LINE L1 6431 6638 0 1 932 374 333 8 0 chrX 45548959 45549085 -121101211 - MIRb SINE MIR -28 240 114 1 932 346 300 201 17 chrX 45549256 45549431 -121100865 + MIR SINE MIR 54 260 -2 1 932 557 174 0 27 chrX 45550339 45550451 -121099845 + Lx9 LINE L1 7279 7387 -257 1 932 355 219 76 0 chrX 45550525 45550644 -121099652 + Lx9 LINE L1 7517 7644 0 1 932 881 242 5 42 chrX 45550793 45551009 -121099287 - B3 SINE B2 0 216 9 1 932 434 284 34 8 chrX 45551470 45551587 -121098709 + PB1 SINE Alu 6 125 -2 1 932 715 236 112 37 chrX 45551600 45551869 -121098427 + L1MA8 LINE L1 5993 6281 -10 1 932 754 330 52 29 chrX 45553039 45553382 -121096914 + MLT1A0 LTR MaLR 11 361 -4 1 932 1259 21 7 0 chrX 45553765 45553910 -121096386 + B1_Mm SINE Alu 1 146 -1 1 932 211 0 0 81 chrX 45553912 45553949 -121096347 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 1 932 411 21 0 0 chrX 45553983 45554031 -121096265 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 932 412 257 51 7 chrX 45554363 45554500 -121095796 + B1F SINE Alu 6 148 -1 1 932 259 302 93 10 chrX 45554531 45554628 -121095668 + PB1 SINE Alu 21 125 -2 1 932 387 0 0 0 chrX 45554641 45554684 -121095612 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 932 957 274 0 0 chrX 45554946 45555161 -121095135 + ID_B1 SINE B4 6 220 -4 1 932 485 292 0 20 chrX 45555880 45556027 -121094269 + ID_B1 SINE B4 81 224 0 1 932 249 146 0 59 chrX 45557363 45557414 -121092882 + U2 snRNA snRNA 4 51 -137 1 932 261 0 0 0 chrX 45558515 45558544 -121091752 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 932 188 35 35 0 chrX 45559238 45559267 -121091029 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1 932 216 0 0 0 chrX 45560285 45560309 -121089987 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 932 211 268 0 18 chrX 45561447 45561504 -121088792 + (CACG)n Simple_repeat Simple_repeat 2 57 0 1 932 405 155 107 58 chrX 45562549 45562652 -121087644 + B1F1 SINE Alu 42 149 0 1 932 378 0 0 0 chrX 45562841 45562883 -121087413 + (TTATA)n Simple_repeat Simple_repeat 1 42 0 1 932 1683 36 0 0 chrX 45563151 45563343 -121086953 + B2_Mm1a SINE B2 2 193 0 1 932 261 302 65 9 chrX 45564759 45564866 -121085430 + MIRb SINE MIR 46 158 -110 1 932 701 262 78 8 chrX 45564911 45565169 -121085127 + MER2 DNA MER2_type 70 345 0 1 932 1370 154 0 26 chrX 45565357 45565584 -121084712 + Lx4A LINE L1 6837 7057 -1 1 932 207 0 0 0 chrX 45565584 45565607 -121084689 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 1 932 235 148 0 169 chrX 45565613 45565678 -121084618 - Lx7 LINE L1 -336 7360 7307 1 932 377 283 0 26 chrX 45566173 45566289 -121084007 - PB1D10 SINE Alu 0 117 5 1 932 186 395 26 9 chrX 45566670 45566785 -121083511 - MIRm SINE MIR -4 272 156 1 932 296 263 0 13 chrX 45566920 45566997 -121083299 + ID2 SINE ID 8 83 0 1 932 601 279 78 45 chrX 45567003 45567157 -121083139 + B3A SINE B2 1 159 -39 1 932 700 94 7 48 chrX 45567679 45567824 -121082472 + (TTTC)n Simple_repeat Simple_repeat 1 139 0 1 932 934 177 78 69 chrX 45567824 45568055 -121082241 - Lx4A LINE L1 0 7058 6826 1 932 519 315 7 20 chrX 45568208 45568360 -121081936 - RSINE1 SINE B4 -14 151 2 1 932 2210 83 83 0 chrX 45568388 45568688 -121081608 + ORR1A2 LTR MaLR 1 325 -2 1 932 22 0 0 0 chrX 45568757 45568779 -121081517 + AT_rich Low_complexity Low_complexity 1 22 0 1 932 417 321 15 8 chrX 45569039 45569171 -121081125 - RSINE1 SINE B4 -29 136 4 1 932 944 102 7 0 chrX 45569190 45569337 -121080959 + (TTC)n Simple_repeat Simple_repeat 2 149 0 1 932 673 200 39 0 chrX 45569339 45569469 -121080827 - B1_Mur3 SINE Alu -9 140 6 1 932 23 0 0 0 chrX 45569627 45569650 -121080646 + AT_rich Low_complexity Low_complexity 1 23 0 1 932 1304 104 16 16 chrX 45569905 45570091 -121080205 + B2_Mm2 SINE B2 2 187 -8 1 932 280 279 38 12 chrX 45570096 45570202 -121080094 - PB1D7 SINE Alu -7 110 7 1 932 360 252 61 0 chrX 45571379 45571478 -121078818 - PB1D10 SINE Alu -3 114 10 1 932 242 282 56 0 chrX 45571430 45571501 -121078795 - B4A SINE B4 -147 145 71 1 932 2235 262 87 95 chrX 45571519 45572434 -121077862 + Lx9 LINE L1 6730 7637 -7 1 932 267 122 0 0 chrX 45572523 45572572 -121077724 + (A)n Simple_repeat Simple_repeat 1 49 0 1 932 1139 57 0 7 chrX 45572645 45572786 -121077510 + B1_Mm SINE Alu 2 141 -6 1 932 201 74 0 0 chrX 45572790 45572817 -121077479 + (A)n Simple_repeat Simple_repeat 1 27 0 1 932 644 256 85 10 chrX 45572991 45573192 -121077104 - ID_B1 SINE B4 -7 217 2 1 932 263 309 27 68 chrX 45573293 45573439 -121076857 + MLT1A0 LTR MaLR 26 165 -200 1 932 538 225 56 113 chrX 45573747 45573942 -121076354 - MLT1B LTR MaLR -8 382 199 1 932 408 20 0 0 chrX 45573978 45574027 -121076269 + (TATG)n Simple_repeat Simple_repeat 4 52 0 1 932 333 253 0 60 chrX 45574030 45574114 -121076182 - PB1D7 SINE Alu -8 112 34 1 932 323 290 114 30 chrX 45574120 45574287 -121076009 - MLT1B LTR MaLR -209 181 1 1 932 188 288 86 57 chrX 45574287 45574415 -121075881 - L2a LINE L2 -27 3399 3267 1 932 1629 219 49 11 chrX 45574415 45574785 -121075511 - ORR1C2 LTR MaLR 0 384 1 1 932 188 288 86 57 chrX 45574785 45574796 -121075500 - L2a LINE L2 -160 3266 3256 1 932 501 232 124 85 chrX 45574832 45574974 -121075322 + B3A SINE B2 8 167 -31 1 932 480 99 0 0 chrX 45574986 45575057 -121075239 + (GA)n Simple_repeat Simple_repeat 2 72 0 1 932 597 312 82 19 chrX 45575092 45575572 -121074724 - L2a LINE L2 -188 3238 2713 1 932 1092 75 7 0 chrX 45575835 45575981 -121074315 - B1_Mm SINE Alu 0 147 1 1 932 927 232 25 68 chrX 45576076 45576393 -121073903 + RLTR11B LTR ERVK 10 294 -151 1 932 367 282 20 20 chrX 45576423 45576603 -121073693 + RLTR11B LTR ERVK 284 494 -34 1 932 305 271 0 0 chrX 45576958 45577028 -121073268 - RSINE1 SINE B4 -8 157 88 1 932 708 286 47 11 chrX 45577028 45577219 -121073077 + Lx8 LINE L1 7096 7293 -180 1 932 856 155 0 21 chrX 45577300 45577445 -121072851 + B1_Mus2 SINE Alu 6 147 0 1 932 270 0 0 0 chrX 45577450 45577480 -121072816 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 1 932 507 309 79 0 chrX 45577480 45577619 -121072677 - RSINE1 SINE B4 -13 152 3 1 932 440 316 0 0 chrX 45577650 45577745 -121072551 + RSINE1 SINE B4 3 97 -68 1 932 392 0 21 0 chrX 45577748 45577796 -121072500 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 932 408 71 0 0 chrX 45577796 45577851 -121072445 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 932 597 28 0 0 chrX 45578152 45578223 -121072073 + (TG)n Simple_repeat Simple_repeat 1 71 0 1 932 505 262 27 33 chrX 45578234 45578384 -121071912 - RSINE1 SINE B4 -15 150 2 1 932 773 184 264 0 chrX 45578821 45578984 -121071312 - B3 SINE B2 -6 210 5 1 932 189 0 0 0 chrX 45580022 45580043 -121070253 + (GA)n Simple_repeat Simple_repeat 1 21 0 1 932 792 214 84 21 chrX 45580176 45580367 -121069929 + B3 SINE B2 1 203 -13 1 932 2192 167 79 19 chrX 45580367 45580838 -121069458 - RMER13B LTR ERVK 0 908 410 1 932 1426 61 5 16 chrX 45580996 45581180 -121069116 + B2_Mm2 SINE B2 2 183 -12 1 932 4916 113 25 1 chrX 45581363 45582090 -121068206 + Lx3A LINE L1 6235 6978 -3 1 932 204 125 0 0 chrX 45582109 45582141 -121068155 + (A)n Simple_repeat Simple_repeat 1 32 0 1 932 198 0 0 0 chrX 45582817 45582839 -121067457 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 932 943 291 47 47 chrX 45583094 45583458 -121066838 + L1MC4 LINE L1 6716 7079 -963 1 932 682 215 0 23 chrX 45583465 45583598 -121066698 + U1 snRNA snRNA 4 133 -32 1 932 259 319 8 8 chrX 45583712 45583829 -121066467 + L1MC4 LINE L1 7282 7398 -644 1 932 730 221 40 28 chrX 45583833 45584045 -121066251 + B3A SINE B2 2 216 0 1 932 445 316 213 16 chrX 45584057 45584438 -121065858 + L1MC4 LINE L1 7408 7862 -180 1 932 710 262 6 0 chrX 45584511 45584671 -121065625 + RSINE1 SINE B4 2 162 -3 1 932 21 82 0 0 chrX 45584671 45584720 -121065576 + AT_rich Low_complexity Low_complexity 1 49 0 1 932 306 329 0 0 chrX 45584808 45584890 -121065406 + ID4 SINE ID 2 83 0 1 932 318 254 160 11 chrX 45584894 45585081 -121065215 + L1MEf LINE L1 1983 2197 -4045 1 932 826 185 0 33 chrX 45585084 45585235 -121065061 - B1_Mur1 SINE Alu -2 147 2 1 932 549 44 0 0 chrX 45585240 45585308 -121064988 + (TCTA)n Simple_repeat Simple_repeat 4 71 0 1 932 5079 58 3 9 chrX 45585308 45585947 -121064349 - L1_Mus3 LINE L1 -12 6626 5992 1 932 1546 233 51 6 chrX 45585963 45586317 -121063979 - ORR1D2 LTR MaLR 0 370 1 1 932 300 319 45 65 chrX 45586378 45586579 -121063717 + L1MEf LINE L1 2231 2427 -3719 1 932 353 276 248 7 chrX 45586613 45586758 -121063538 + B4A SINE B4 42 221 -71 1 932 1186 284 30 25 chrX 45586793 45587154 -121063142 + Lx8 LINE L1 6579 6941 -532 1 932 1554 183 77 42 chrX 45587239 45587679 -121062617 - RMER15 LTR ERVL 0 575 64 1 932 633 199 14 14 chrX 45587682 45587820 -121062476 - B1_Mus1 SINE Alu -5 143 6 1 932 253 246 0 44 chrX 45587929 45587997 -121062299 - RMER15 LTR ERVL -510 65 1 1 932 443 195 0 0 chrX 45588183 45588270 -121062026 + B1F1 SINE Alu 31 117 -32 1 932 252 260 0 74 chrX 45588270 45588291 -121062005 + ID_B1 SINE B4 112 211 -13 1 932 869 281 57 52 chrX 45588377 45588745 -121061551 - L1M4 LINE L1 -1319 4827 4458 1 932 467 288 79 40 chrX 45588762 45588914 -121061382 - RSINE1 SINE B4 -5 160 3 1 932 258 275 22 51 chrX 45588919 45589057 -121061239 - L1M4 LINE L1 -1685 4461 4328 1 932 413 55 0 0 chrX 45589103 45589158 -121061138 - B2_Mm2 SINE B2 -94 101 47 2 932 1380 69 40 0 chrX 45589181 45589355 -121060941 - B2_Mm2 SINE B2 -14 181 1 2 932 719 237 20 64 chrX 45589543 45589746 -121060550 + B3A SINE B2 5 198 0 2 932 235 273 15 29 chrX 45589995 45590063 -121060233 - L1M4 LINE L1 -2039 4101 4035 1 932 244 132 93 19 chrX 45590218 45590272 -121060024 - B1F SINE Alu -8 141 84 2 932 780 262 43 10 chrX 45590318 45590526 -121059770 + B3 SINE B2 2 216 0 2 932 237 219 41 0 chrX 45590537 45590610 -121059686 + L1MEf LINE L1 2172 2247 -3995 2 932 606 234 0 15 chrX 45590610 45590740 -121059556 + RSINE1 SINE B4 3 130 -35 2 932 286 218 103 56 chrX 45590921 45591028 -121059268 + PB1D10 SINE Alu 1 112 -5 2 932 937 141 0 0 chrX 45591124 45591266 -121059030 + B1_Mus1 SINE Alu 1 142 -6 2 932 445 340 50 57 chrX 45591307 45591569 -121058727 - MLT1E2 LTR MaLR -2 625 366 2 932 837 289 27 86 chrX 45591570 45592118 -121058178 + L1MEf LINE L1 2613 3128 -3018 2 932 840 199 193 0 chrX 45592311 45592492 -121057804 + B3 SINE B2 1 216 0 2 932 1413 78 20 20 chrX 45592527 45592722 -121057574 - B2_Mm2 SINE B2 0 195 1 2 932 583 252 109 0 chrX 45592755 45592902 -121057394 + B3 SINE B2 2 164 -52 2 932 567 0 0 0 chrX 45592902 45592965 -121057331 + (CATATA)n Simple_repeat Simple_repeat 5 67 0 2 932 514 284 96 59 chrX 45592965 45593015 -121057281 + B3A SINE B2 152 194 -1 2 932 425 296 20 7 chrX 45593152 45593298 -121056998 + B1F SINE Alu 1 148 -1 2 932 399 250 13 19 chrX 45593299 45593458 -121056838 + L1M4 LINE L1 3730 3887 -2259 2 932 637 244 19 6 chrX 45593462 45593619 -121056677 + B3A SINE B2 2 160 -38 2 932 264 77 0 0 chrX 45593624 45593663 -121056633 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 932 1243 183 5 0 chrX 45593697 45593921 -121056375 + URR1B DNA MER1_type 1 225 0 2 932 735 268 81 5 chrX 45594015 45594225 -121056071 - MTEa LTR MaLR -143 236 11 2 932 413 254 40 32 chrX 45594348 45594474 -121055822 + L1M4 LINE L1 4068 4194 -1952 2 932 275 311 0 32 chrX 45594530 45594623 -121055673 + GA-rich Low_complexity Low_complexity 4 93 0 2 932 3926 36 2 17 chrX 45594683 45595162 -121055134 + L1Md_F2 LINE L1 6110 6581 -1 2 932 903 161 0 20 chrX 45595233 45595379 -121054917 + B1_Mur2 SINE Alu 5 147 -2 2 932 292 288 0 0 chrX 45595459 45595532 -121054764 + B1_Mur4 SINE Alu 16 88 -62 2 932 992 67 89 0 chrX 45595532 45595667 -121054629 + B1_Mus1 SINE Alu 1 147 -1 2 932 197 98 24 0 chrX 45595668 45595709 -121054587 + (CAAAAA)n Simple_repeat Simple_repeat 4 45 0 2 932 292 213 49 0 chrX 45595710 45595771 -121054525 + B1F1 SINE Alu 81 144 -5 2 932 297 247 176 27 chrX 45595777 45595964 -121054332 + L1M4 LINE L1 4290 4504 -1642 2 932 1541 269 75 42 chrX 45596188 45596789 -121053507 + L1MC3 LINE L1 6726 7346 -439 2 932 349 276 190 0 chrX 45596829 45596945 -121053351 + B1F SINE Alu 11 148 -1 2 932 403 273 115 0 chrX 45596958 45597097 -121053199 + L1MC3 LINE L1 7393 7547 -238 2 932 646 205 33 0 chrX 45597105 45597227 -121053069 + B1_Mur2 SINE Alu 12 137 -12 2 932 5912 170 81 16 chrX 45597257 45598363 -121051933 + Lx5 LINE L1 5826 7003 -47 2 932 330 26 0 0 chrX 45598382 45598421 -121051875 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2 932 214 303 15 29 chrX 45598612 45598680 -121051616 + ID4 SINE ID 6 72 -11 2 932 380 284 16 33 chrX 45598696 45598878 -121051418 + L1M5 LINE L1 3839 4017 -2129 2 932 790 272 5 10 chrX 45598878 45599082 -121051214 + B3 SINE B2 1 203 -13 2 932 306 0 0 0 chrX 45599093 45599127 -121051169 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 2 932 322 226 108 0 chrX 45599164 45599257 -121051039 + ID_B1 SINE B4 120 222 -2 2 932 421 238 110 79 chrX 45599274 45599438 -121050858 + B4A SINE B4 3 171 -121 2 932 315 278 0 14 chrX 45599521 45599594 -121050702 + RSINE1 SINE B4 85 156 -9 2 932 414 0 0 0 chrX 45599622 45599668 -121050628 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 932 268 216 151 56 chrX 45599669 45599800 -121050496 + L1M5 LINE L1 4009 4152 -1994 2 932 5117 201 77 9 chrX 45599824 45600996 -121049300 - L1_Mur3 LINE L1 -6386 1326 76 2 932 1937 172 52 119 chrX 45600996 45601240 -121049056 - RLTR24 LTR ERV1 0 529 266 2 932 3126 72 15 0 chrX 45601240 45601630 -121048666 - MTA_Mm LTR MaLR 0 396 1 2 932 7630 72 10 100 chrX 45601630 45602837 -121047459 - MTA_Mm-int LTR MaLR 0 1098 1 2 932 3263 56 2 0 chrX 45602837 45603232 -121047064 - MTA_Mm LTR MaLR 0 396 1 2 932 1937 172 52 119 chrX 45603232 45603547 -121046749 - RLTR24 LTR ERV1 -264 265 8 2 932 1624 245 103 37 chrX 45603551 45604308 -121045988 - L1_Mur3 LINE L1 -6984 728 2 2 932 22 0 0 0 chrX 45604313 45604335 -121045961 + AT_rich Low_complexity Low_complexity 1 22 0 2 932 643 193 62 41 chrX 45604414 45604560 -121045736 + B1_Mur3 SINE Alu 1 149 0 2 932 365 233 19 10 chrX 45604587 45604691 -121045605 + L1MD1 LINE L1 5894 5998 -244 2 932 395 217 65 0 chrX 45604691 45604783 -121045513 + B1_Mur2 SINE Alu 45 142 -7 2 932 281 198 9 94 chrX 45604818 45604924 -121045372 + L1MD1 LINE L1 6056 6152 -90 2 932 593 180 68 30 chrX 45605192 45605324 -121044972 + B1_Mus2 SINE Alu 10 146 -1 2 932 600 284 89 5 chrX 45605631 45605822 -121044474 + ORR1D2 LTR MaLR 1 207 -163 2 932 446 238 95 0 chrX 45605823 45605928 -121044368 + B1_Mur1 SINE Alu 1 115 -34 2 932 315 104 0 0 chrX 45605928 45605976 -121044320 + (GGGGA)n Simple_repeat Simple_repeat 4 51 0 2 932 399 202 12 1 chrX 45605993 45606090 -121044206 + ORR1D2 LTR MaLR 271 367 -3 2 932 565 314 161 65 chrX 45606095 45606371 -121043925 + L2b LINE L2 2435 2742 -677 2 932 670 212 13 27 chrX 45606371 45606521 -121043775 - B1_Mur3 SINE Alu -1 148 1 2 932 565 314 144 69 chrX 45606521 45606904 -121043392 + L2b LINE L2 2743 3132 -243 2 932 492 167 289 0 chrX 45606945 45607059 -121043237 + B1_Mur3 SINE Alu 3 149 0 2 932 386 232 0 31 chrX 45607456 45607554 -121042742 - ID_B1 SINE B4 -4 220 126 2 932 463 214 123 28 chrX 45607681 45607787 -121042509 + RSINE1 SINE B4 25 140 -25 2 932 1191 48 7 0 chrX 45608395 45608541 -121041755 + B1_Mus2 SINE Alu 1 147 0 2 932 201 159 0 0 chrX 45608541 45608585 -121041711 + A-rich Low_complexity Low_complexity 1 44 0 2 932 268 111 0 43 chrX 45608678 45608725 -121041571 + Lx4A LINE L1 7009 7053 -5 2 932 236 310 50 7 chrX 45608747 45608868 -121041428 + L2b LINE L2 3249 3424 -2 2 932 459 262 77 65 chrX 45609044 45609199 -121041097 + RSINE1 SINE B4 9 165 0 2 932 202 225 0 0 chrX 45609199 45609239 -121041057 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 932 307 241 12 37 chrX 45609264 45609346 -121040950 + PB1D10 SINE Alu 2 81 -36 2 932 225 65 0 0 chrX 45609350 45609381 -121040915 + (A)n Simple_repeat Simple_repeat 1 31 0 2 932 759 207 7 7 chrX 45610777 45610923 -121039373 + B1_Mus1 SINE Alu 3 148 0 2 932 1015 164 0 154 chrX 45611192 45611459 -121038837 - URR1A DNA MER1_type 0 226 1 2 932 180 0 0 0 chrX 45611711 45611731 -121038565 + (T)n Simple_repeat Simple_repeat 1 20 0 2 932 246 208 104 0 chrX 45611735 45611783 -121038513 - B1_Mus2 SINE Alu -7 140 88 2 932 738 176 0 0 chrX 45611857 45611976 -121038320 + B1_Mur1 SINE Alu 24 142 -7 2 932 273 75 0 0 chrX 45612071 45612111 -121038185 + (T)n Simple_repeat Simple_repeat 1 40 0 2 932 1151 88 0 0 chrX 45612111 45612259 -121038037 - B1_Mus1 SINE Alu 0 148 1 2 932 1256 114 11 0 chrX 45612311 45612487 -121037809 + B2_Mm1t SINE B2 2 179 -14 2 932 314 94 361 18 chrX 45612554 45612662 -121037634 + B2_Mm2 SINE B2 47 191 -4 2 116 409 320 68 0 chrX 45613020 45613167 -121037129 - RSINE1 SINE B4 -4 161 5 2 933 233 267 100 0 chrX 45613621 45613681 -121036615 + tRNA-Ala-GCY_ tRNA tRNA 4 69 -6 2 933 791 151 32 0 chrX 45613998 45614124 -121036172 - B1_Mur4 SINE Alu -7 143 14 2 933 1207 50 0 0 chrX 45614338 45614479 -121035817 - B1_Mm SINE Alu -6 141 1 2 933 543 235 83 8 chrX 45614523 45614656 -121035640 - RMER15 LTR ERVL -107 468 326 2 933 720 125 140 0 chrX 45614676 45614812 -121035484 - Lx5 LINE L1 0 7050 6896 2 933 222 37 0 0 chrX 45615021 45615048 -121035248 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2 933 1008 123 129 0 chrX 45615386 45615557 -121034739 + B2_Mm2 SINE B2 3 195 0 2 933 533 239 0 52 chrX 45615580 45615695 -121034601 + B1_Mur1 SINE Alu 9 117 -32 2 933 1421 89 16 0 chrX 45616240 45616431 -121033865 + B2_Mm2 SINE B2 2 195 0 2 933 3014 158 91 167 chrX 45617100 45618233 -121032063 + ORR1A4-int LTR MaLR 1 1045 -918 2 933 985 82 0 165 chrX 45618233 45618310 -121031986 + B1_Mus1 SINE Alu 2 65 -83 2 933 2670 46 3 0 chrX 45618310 45618636 -121031660 - L1Md_T LINE L1 0 6582 6256 2 933 985 82 0 165 chrX 45618636 45618734 -121031562 + B1_Mus1 SINE Alu 66 148 0 2 933 258 156 0 0 chrX 45618734 45618779 -121031517 + A-rich Low_complexity Low_complexity 1 45 0 2 933 5414 107 27 100 chrX 45618779 45619788 -121030508 + ORR1A4-int LTR MaLR 1029 1963 0 2 933 1940 138 12 24 chrX 45619788 45620121 -121030175 + ORR1A4 LTR MaLR 1 329 0 2 933 852 136 227 0 chrX 45620170 45620346 -121029950 - B3 SINE B2 0 216 1 2 933 1219 70 6 0 chrX 45620443 45620601 -121029695 - B2_Mm1t SINE B2 -33 160 2 2 933 609 52 0 0 chrX 45620911 45620988 -121029308 + (TAGA)n Simple_repeat Simple_repeat 4 80 0 2 933 224 30 30 0 chrX 45621014 45621047 -121029249 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 2 933 989 83 0 0 chrX 45621253 45621386 -121028910 + B1_Mus1 SINE Alu 7 139 -9 2 933 493 182 45 159 chrX 45621256 45621413 -121028883 + B4A SINE B4 94 232 -60 2 933 1130 36 0 7 chrX 45621558 45621696 -121028600 - B1_Mus1 SINE Alu -10 138 2 2 933 606 196 0 82 chrX 45622221 45622343 -121027953 + PB1D9 SINE Alu 8 119 -1 2 933 391 245 87 67 chrX 45622343 45622361 -121027935 + B4A SINE B4 129 236 -56 2 933 307 216 170 30 chrX 45622418 45622518 -121027778 - PB1D10 SINE Alu -3 114 1 2 933 308 229 43 0 chrX 45622694 45622764 -121027532 + B1_Mus2 SINE Alu 3 75 -72 2 933 271 310 97 9 chrX 45622782 45622896 -121027400 + PB1 SINE Alu 2 125 -2 2 933 227 310 0 0 chrX 45623535 45623593 -121026703 + RSINE1 SINE B4 3 60 -105 2 933 219 36 0 0 chrX 45623617 45623645 -121026651 + (T)n Simple_repeat Simple_repeat 1 28 0 3 933 536 130 188 10 chrX 45623645 45623746 -121026550 - PB1D9 SINE Alu 0 120 2 3 933 466 266 34 76 chrX 45623747 45623865 -121026431 + RSINE1 SINE B4 51 163 -2 2 933 201 147 0 0 chrX 45623867 45623901 -121026395 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 933 298 273 89 63 chrX 45624197 45624363 -121025933 + L2b LINE L2 3224 3387 0 3 933 294 242 182 0 chrX 45625010 45625109 -121025187 + PB1D10 SINE Alu 1 117 0 3 933 291 232 0 99 chrX 45625113 45625204 -121025092 + ID2 SINE ID 2 83 0 3 933 387 309 0 35 chrX 45625406 45625520 -121024776 - PB1D10 SINE Alu 0 117 8 3 933 624 183 26 9 chrX 45625733 45625849 -121024447 + B1F1 SINE Alu 1 118 -31 3 933 1137 62 0 14 chrX 45627421 45627568 -121022728 + B1_Mus2 SINE Alu 1 145 -2 3 933 303 253 45 135 chrX 45627687 45627865 -121022431 + ID_B1 SINE B4 15 176 -48 3 933 189 0 0 0 chrX 45629034 45629055 -121021241 + (T)n Simple_repeat Simple_repeat 1 21 0 3 933 567 286 68 12 chrX 45629062 45629225 -121021071 - ID_B1 SINE B4 -50 174 3 3 933 247 309 173 0 chrX 45629440 45629521 -121020775 + PB1D7 SINE Alu 1 95 -25 3 933 868 132 14 22 chrX 45630005 45630144 -121020152 + B1_Mur3 SINE Alu 7 144 -5 3 933 211 311 13 63 chrX 45630262 45630341 -121019955 + L2c LINE L2 3307 3381 -6 3 933 234 184 0 0 chrX 45632047 45632096 -121018200 + T-rich Low_complexity Low_complexity 1 49 0 3 933 262 173 137 107 chrX 45632096 45632224 -121018072 - PB1D10 SINE Alu 0 120 2 3 933 512 148 268 36 chrX 45632543 45632655 -121017641 + B1_Mur2 SINE Alu 7 144 -5 3 933 859 233 98 5 chrX 45632973 45633167 -121017129 + ID_B1 SINE B4 8 219 -5 3 933 311 237 49 88 chrX 45633501 45633581 -121016715 - ID_B1 SINE B4 -20 204 127 3 933 1317 110 11 0 chrX 45633581 45633772 -121016524 - B2_Mm1t SINE B2 0 193 1 3 933 311 237 49 88 chrX 45633772 45633793 -121016503 - ID_B1 SINE B4 -98 126 107 3 933 1221 141 0 5 chrX 45633841 45634033 -121016263 - URR1A DNA MER1_type 0 226 36 3 933 1112 63 14 0 chrX 45634470 45634613 -121015683 - B1_Mus2 SINE Alu -1 146 2 3 933 596 195 16 48 chrX 45634652 45634776 -121015520 + PB1D9 SINE Alu 1 120 0 3 933 394 289 31 12 chrX 45635065 45635172 -121015124 - PB1D10 SINE Alu -37 112 6 3 933 340 325 25 34 chrX 45635097 45635215 -121015081 - ID_B1 SINE B4 -63 161 45 3 933 2160 166 136 43 chrX 45636013 45636528 -121013768 + RMER15 LTR ERVL 13 575 0 3 933 234 264 0 0 chrX 45636822 45636875 -121013421 + ID4_ SINE ID 3 55 -28 3 933 324 240 13 57 chrX 45638672 45638831 -121011465 + C-rich Low_complexity Low_complexity 5 156 0 3 933 387 284 124 67 chrX 45641159 45641416 -121008880 + MIRb SINE MIR 2 265 -3 3 933 405 0 0 0 chrX 45641539 45641584 -121008712 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 933 370 318 9 9 chrX 45641647 45641755 -121008541 - ID_B1 SINE B4 -3 221 114 3 933 607 262 0 33 chrX 45641766 45641916 -121008380 - B1_Mur1 SINE Alu 0 149 5 3 933 369 93 0 0 chrX 45642321 45642375 -121007921 + (TTGG)n Simple_repeat Simple_repeat 2 55 0 3 933 766 111 19 0 chrX 45642375 45642483 -121007813 - B1_Mur4 SINE Alu -6 144 35 3 933 530 256 105 0 chrX 45642483 45642616 -121007680 - B1_Mur1 SINE Alu -1 148 2 3 933 508 284 54 0 chrX 45642635 45642783 -121007513 - RSINE1 SINE B4 -5 160 5 3 933 1280 103 0 6 chrX 45643114 45643290 -121007006 - B2_Mm2 SINE B2 -19 176 2 3 933 288 184 104 13 chrX 45643342 45643419 -121006877 + PB1D10 SINE Alu 32 115 -2 3 933 790 196 15 0 chrX 45643618 45643751 -121006545 - RSINE1 SINE B4 -28 137 3 3 933 468 172 0 0 chrX 45643851 45643938 -121006358 + (TA)n Simple_repeat Simple_repeat 2 88 0 3 933 522 221 28 19 chrX 45643950 45644056 -121006240 - B3 SINE B2 -109 107 1 3 933 614 272 35 104 chrX 45644058 45644206 -121006090 - ID_B1 SINE B4 -7 217 76 3 933 1201 48 14 0 chrX 45644206 45644353 -121005943 + B1_Mur4 SINE Alu 2 150 0 3 933 614 272 35 104 chrX 45644353 45644434 -121005862 - ID SINE ID -149 75 4 3 933 359 287 12 0 chrX 45644651 45644746 -121005550 - B1F SINE Alu 0 120 18 3 933 195 335 117 65 chrX 45644845 45645170 -121005126 + L2c LINE L2 2975 3316 -71 3 933 387 215 8 108 chrX 45645172 45645292 -121005004 + B1_Mur1 SINE Alu 1 108 -41 3 933 354 296 161 0 chrX 45645352 45645514 -121004782 - MIR SINE MIR -26 236 49 3 933 300 106 0 0 chrX 45645848 45645882 -121004414 + (TTC)n Simple_repeat Simple_repeat 1 34 0 3 933 1350 67 0 0 chrX 45645882 45646060 -121004236 + (TCC)n Simple_repeat Simple_repeat 3 180 0 3 933 300 106 0 0 chrX 45646060 45646072 -121004224 + (TTC)n Simple_repeat Simple_repeat 1 12 0 3 933 1305 20 0 0 chrX 45646072 45646219 -121004077 - B1_Mus1 SINE Alu 0 148 2 3 933 315 0 0 0 chrX 45646798 45646833 -121003463 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 3 933 802 158 7 28 chrX 45646864 45647007 -121003289 + B1_Mus1 SINE Alu 9 148 0 3 933 843 134 60 0 chrX 45647309 45647443 -121002853 + B1_Mus1 SINE Alu 2 143 -5 3 933 391 305 48 48 chrX 45647499 45647623 -121002673 + B1F SINE Alu 10 133 -16 3 933 621 261 18 43 chrX 45647598 45647762 -121002534 + ID_B1 SINE B4 64 223 -1 3 933 695 146 52 44 chrX 45647805 45647941 -121002355 - B1_Mur4 SINE Alu -13 137 1 3 933 514 250 91 0 chrX 45648018 45648150 -121002146 - B1F1 SINE Alu -5 144 1 3 933 254 333 50 8 chrX 45648502 45648623 -121001673 + MIRc SINE MIR 9 134 -134 3 933 760 327 19 0 chrX 45648750 45648961 -121001335 + ID_B1 SINE B4 3 217 -7 3 933 189 147 0 0 chrX 45648966 45649000 -121001296 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 933 303 236 74 19 chrX 45649007 45649115 -121001181 - L1ME4a LINE L1 -26 6098 5985 3 933 31 26 0 0 chrX 45649214 45649252 -121001044 + AT_rich Low_complexity Low_complexity 1 38 0 3 933 333 0 0 0 chrX 45649291 45649328 -121000968 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 933 271 204 0 0 chrX 45649414 45649463 -121000833 - RSINE1 SINE B4 -107 58 10 3 933 261 163 0 0 chrX 45649474 45649523 -121000773 + (ATTG)n Simple_repeat Simple_repeat 3 51 0 3 933 520 213 134 54 chrX 45649525 45649674 -121000622 - RSINE1 SINE B4 0 165 5 3 933 498 243 9 9 chrX 45649681 45649793 -121000503 - PB1D10 SINE Alu -1 116 5 3 933 1384 89 16 5 chrX 45649854 45650046 -121000250 - B2_Mm2 SINE B2 -1 194 1 3 933 23 33 0 0 chrX 45650265 45650295 -121000001 + AT_rich Low_complexity Low_complexity 1 30 0 3 933 261 203 0 17 chrX 45650301 45650361 -120999935 - B3 SINE B2 -5 211 153 3 933 265 319 0 0 chrX 45650356 45650425 -120999871 - ID4_ SINE ID -14 69 1 3 933 1867 246 78 68 chrX 45650553 45651007 -120999289 - Lx8 LINE L1 -4 7469 7017 3 933 792 129 96 22 chrX 45651007 45651142 -120999154 - B1_Mus1 SINE Alu -1 147 3 3 933 1867 246 78 68 chrX 45651142 45651383 -120998913 - Lx8 LINE L1 -457 7016 6767 3 933 669 289 62 17 chrX 45651392 45651568 -120998728 - B3 SINE B2 -10 188 5 3 933 918 234 14 34 chrX 45651663 45651871 -120998425 + B3 SINE B2 13 216 0 3 933 330 239 11 33 chrX 45651907 45651998 -120998298 + PB1D10 SINE Alu 27 115 -2 3 933 247 318 83 18 chrX 45652004 45652113 -120998183 + L1ME1 LINE L1 5949 6064 -115 3 933 293 282 0 71 chrX 45652275 45652301 -120997995 + PB1D9 SINE Alu 37 60 -60 3 933 2075 122 88 70 chrX 45652301 45652688 -120997608 + ORR1B1 LTR MaLR 1 394 0 3 933 293 282 0 71 chrX 45652688 45652745 -120997551 + PB1D9 SINE Alu 61 114 -6 3 933 330 247 123 0 chrX 45652759 45652840 -120997456 + U6 snRNA snRNA 9 99 -8 3 933 748 57 19 0 chrX 45652840 45652946 -120997350 + (TAGA)n Simple_repeat Simple_repeat 2 109 0 3 933 819 174 29 0 chrX 45652949 45653087 -120997209 - B1_Mus1 SINE Alu -6 142 1 3 933 919 175 44 123 chrX 45653149 45653377 -120996919 - B3 SINE B2 -5 211 2 3 933 453 234 53 26 chrX 45653566 45653680 -120996616 + ID_B1 SINE B4 108 224 0 3 933 1958 38 4 29 chrX 45653781 45654027 -120996269 - L1_Mus1 LINE L1 0 6567 6328 3 933 357 17 48 32 chrX 45654030 45654092 -120996204 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 3 933 1204 43 0 0 chrX 45654092 45654230 -120996066 - B1_Mm SINE Alu -9 138 1 3 933 23 0 0 0 chrX 45654236 45654259 -120996037 + AT_rich Low_complexity Low_complexity 1 23 0 3 933 781 102 0 18 chrX 45654347 45654457 -120995839 - B2_Mm2 SINE B2 -85 110 3 3 933 223 174 0 0 chrX 45654459 45654505 -120995791 + T-rich Low_complexity Low_complexity 1 46 0 3 933 486 358 0 38 chrX 45654516 45654673 -120995623 - RSINE1 SINE B4 -12 153 3 3 933 510 252 71 43 chrX 45654692 45654833 -120995463 - B1F1 SINE Alu 0 149 5 3 933 861 148 0 97 chrX 45654864 45655029 -120995267 + B1_Mur3 SINE Alu 1 149 0 3 933 1232 61 0 0 chrX 45655117 45655265 -120995031 - B1_Mus1 SINE Alu 0 148 1 3 933 849 20 0 0 chrX 45655272 45655371 -120994925 + (TTC)n Simple_repeat Simple_repeat 2 100 0 3 933 974 91 0 53 chrX 45655449 45655600 -120994696 + B1_Mus1 SINE Alu 6 148 0 3 933 531 321 0 8 chrX 45655601 45655733 -120994563 + B3A SINE B2 27 157 -41 3 933 396 272 44 61 chrX 45655759 45655939 -120994357 + B3A SINE B2 4 180 -18 3 933 201 247 78 52 chrX 45656156 45656233 -120994063 - L3 LINE CR1 -2055 2434 2356 4 933 650 122 0 39 chrX 45656641 45656655 -120993641 - B1_Mur4 SINE Alu 0 150 140 4 933 243 0 0 0 chrX 45656655 45656682 -120993614 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 4 933 650 122 0 39 chrX 45656682 45656769 -120993527 - B1_Mur4 SINE Alu -11 139 53 4 933 907 245 32 19 chrX 45656823 45657039 -120993257 - ID_B1 SINE B4 -4 220 2 4 933 212 288 193 67 chrX 45657039 45657158 -120993138 + MIRb SINE MIR 28 161 -107 4 933 550 268 29 0 chrX 45657158 45657296 -120993000 + RSINE1 SINE B4 5 146 -19 4 933 465 19 0 0 chrX 45657300 45657354 -120992942 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 4 933 357 186 0 0 chrX 45657435 45657505 -120992791 + T-rich Low_complexity Low_complexity 1 70 0 4 933 653 233 0 23 chrX 45657521 45657653 -120992643 - B1_Mur3 SINE Alu -2 147 19 4 933 222 37 0 0 chrX 45657665 45657692 -120992604 + (A)n Simple_repeat Simple_repeat 1 27 0 4 933 801 204 0 40 chrX 45657727 45657875 -120992421 + B1_Mur1 SINE Alu 3 144 -5 4 933 1166 62 14 0 chrX 45657882 45658027 -120992269 + B1_Mm SINE Alu 1 147 0 4 933 497 219 91 142 chrX 45658076 45658273 -120992023 - B3A SINE B2 -5 190 4 4 933 215 31 31 0 chrX 45658605 45658637 -120991659 + (TTG)n Simple_repeat Simple_repeat 2 34 0 4 933 815 258 33 9 chrX 45658643 45658858 -120991438 - ID_B1 SINE B4 -4 220 1 4 933 279 303 0 84 chrX 45658962 45658973 -120991323 + ID4_ SINE ID 3 29 -123 4 933 296 218 0 0 chrX 45658973 45659028 -120991268 + tRNA-Ala-GCA tRNA tRNA 8 62 -13 4 933 279 303 0 84 chrX 45659028 45659045 -120991251 + ID4_ SINE ID 30 78 -74 4 933 291 244 80 57 chrX 45659680 45659768 -120990528 + PB1D10 SINE Alu 10 98 -51 4 933 493 250 50 22 chrX 45659850 45659989 -120990307 + ID_B1 SINE B4 75 217 -7 4 933 434 220 60 0 chrX 45660219 45660319 -120989977 + U6 snRNA snRNA 1 106 -1 4 933 775 252 46 73 chrX 45660715 45660815 -120989481 + ID_B1 SINE B4 1 98 -126 4 933 1103 36 65 0 chrX 45660815 45660953 -120989343 + B1_Mus2 SINE Alu 1 147 0 4 933 775 252 46 73 chrX 45660953 45661070 -120989226 + ID_B1 SINE B4 99 211 -13 4 933 280 344 10 0 chrX 45661091 45661187 -120989109 + ID_B1 SINE B4 80 176 -48 4 933 370 277 79 0 chrX 45661101 45661202 -120989094 + PB1D10 SINE Alu 9 117 0 4 933 232 262 0 62 chrX 45661208 45661273 -120989023 + L1ME4a LINE L1 5966 6026 -98 4 933 216 262 50 134 chrX 45661308 45661427 -120988869 - MIRb SINE MIR -38 230 122 4 933 268 273 0 83 chrX 45661464 45661548 -120988748 + PB1D7 SINE Alu 41 117 -3 4 933 681 241 132 16 chrX 45661606 45661796 -120988500 + ID_B1 SINE B4 3 214 -10 4 933 570 224 72 0 chrX 45661868 45661993 -120988303 - B1_Mur3 SINE Alu -8 141 8 4 933 244 291 80 26 chrX 45663186 45663299 -120986997 + L2a LINE L2 3270 3388 -38 4 933 374 0 22 0 chrX 45663824 45663870 -120986426 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 933 356 323 105 61 chrX 45665398 45665645 -120984651 - MIR SINE MIR -4 258 1 4 933 1261 20 7 7 chrX 45666559 45666707 -120983589 + B1_Mus1 SINE Alu 1 148 0 4 933 235 292 80 31 chrX 45666877 45666994 -120983302 + MIR SINE MIR 29 152 -110 4 933 256 308 0 71 chrX 45667024 45667122 -120983174 + ID_B1 SINE B4 132 222 -2 4 933 246 357 77 32 chrX 45668569 45668789 -120981507 + MamSINE1 SINE tRNA 23 252 -38 4 933 648 302 44 18 chrX 45669293 45669519 -120980777 + L2c LINE L2 3154 3385 -2 4 933 470 292 94 38 chrX 45670689 45670912 -120979384 - MIRc SINE MIR -13 255 15 4 933 517 236 49 28 chrX 45672241 45672385 -120977911 + B1F2 SINE Alu 1 147 -2 4 933 217 191 40 60 chrX 45672481 45672531 -120977765 + B1F SINE Alu 37 85 -64 4 933 492 206 88 0 chrX 45672630 45672732 -120977564 + B1_Mur4 SINE Alu 40 150 0 4 933 598 265 29 0 chrX 45672813 45672949 -120977347 + B4A SINE B4 1 140 -152 4 933 812 150 0 43 chrX 45672952 45673091 -120977205 + B1_Mur3 SINE Alu 3 135 -14 4 933 231 61 0 0 chrX 45673091 45673124 -120977172 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 4 933 902 98 0 0 chrX 45673124 45673247 -120977049 - B1_Mus1 SINE Alu -2 146 24 4 933 256 287 84 60 chrX 45673126 45673293 -120977003 + YREP_Mm Unknown Unknown 180 350 -1462 4 933 510 223 35 144 chrX 45673302 45673391 -120976905 + B4A SINE B4 139 225 -67 4 933 958 182 53 79 chrX 45673391 45673521 -120976775 - URR1B DNA MER1_type 0 225 98 4 933 1598 42 16 0 chrX 45673521 45673713 -120976583 - B2_Mm2 SINE B2 0 195 1 4 933 958 182 53 79 chrX 45673713 45673809 -120976487 - URR1B DNA MER1_type -128 97 5 4 933 510 223 35 144 chrX 45673809 45673892 -120976404 + B4A SINE B4 226 292 0 4 933 209 204 0 0 chrX 45673892 45673936 -120976360 + (CCA)n Simple_repeat Simple_repeat 1 44 0 4 933 542 229 41 48 chrX 45674024 45674171 -120976125 + B1_Mur1 SINE Alu 4 149 0 4 933 263 316 0 0 chrX 45674676 45674755 -120975541 + MIRc SINE MIR 190 268 0 4 933 351 0 0 0 chrX 45674867 45674906 -120975390 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 933 570 128 0 0 chrX 45674906 45675023 -120975273 + (GA)n Simple_repeat Simple_repeat 2 118 0 4 933 295 236 18 0 chrX 45675444 45675499 -120974797 - RLTR28 LTR ERVL 0 524 469 4 933 216 0 0 0 chrX 45675551 45675575 -120974721 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 933 612 103 0 0 chrX 45675575 45675682 -120974614 + (GA)n Simple_repeat Simple_repeat 2 108 0 4 933 951 118 15 7 chrX 45675684 45675820 -120974476 - B1_Mur3 SINE Alu -12 137 1 4 933 8274 27 0 0 chrX 45676587 45677813 -120972483 - L1Md_T LINE L1 0 6582 5357 4 933 285 89 0 0 chrX 45678106 45678151 -120972145 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 933 574 233 15 104 chrX 45678153 45678242 -120972054 - RSINE1 SINE B4 -43 122 34 4 933 960 186 31 41 chrX 45678242 45678438 -120971858 - B3A SINE B2 -3 195 2 4 933 574 233 15 104 chrX 45678438 45678482 -120971814 - RSINE1 SINE B4 -132 33 1 4 933 512 229 167 19 chrX 45678507 45678663 -120971633 - B3 SINE B2 0 216 38 4 933 378 0 0 0 chrX 45678679 45678721 -120971575 + (T)n Simple_repeat Simple_repeat 1 42 0 4 933 1193 55 7 0 chrX 45678721 45678867 -120971429 - B1_Mus2 SINE Alu 0 147 1 4 933 253 125 0 0 chrX 45678868 45678908 -120971388 - B2_Mm2 SINE B2 -155 40 1 4 933 260 269 0 192 chrX 45679008 45679049 -120971247 - RLTR31_Mm LTR ERVK -405 156 89 4 933 414 167 66 12 chrX 45679049 45679150 -120971146 - B1_Mus1 SINE Alu 0 117 6 4 933 260 269 0 192 chrX 45679150 45679201 -120971095 - RLTR31_Mm LTR ERVK -405 88 1 4 933 266 244 192 0 chrX 45679454 45679532 -120970764 + PB1D10 SINE Alu 13 105 -12 4 933 291 54 0 0 chrX 45679534 45679571 -120970725 + (CAAT)n Simple_repeat Simple_repeat 2 38 0 4 933 491 295 31 0 chrX 45679578 45679707 -120970589 + B1F1 SINE Alu 6 138 -11 4 933 1013 130 7 0 chrX 45680036 45680182 -120970114 + B1_Mus1 SINE Alu 2 148 0 4 933 1138 44 0 7 chrX 45680214 45680350 -120969946 + B1_Mus1 SINE Alu 2 136 -12 4 933 693 36 0 0 chrX 45680350 45680434 -120969862 + (GAAA)n Simple_repeat Simple_repeat 2 85 0 4 933 218 119 24 0 chrX 45680462 45680504 -120969792 + (TTTTG)n Simple_repeat Simple_repeat 1 43 0 4 933 995 100 43 0 chrX 45680505 45680645 -120969651 - B1_Mm SINE Alu -1 146 1 4 933 388 180 0 0 chrX 45680645 45680706 -120969590 + RLTR31_Mur LTR ERVK 347 407 -146 4 933 496 236 45 51 chrX 45680693 45680849 -120969447 + RLTR17 LTR ERVK 461 615 -77 4 933 233 220 0 39 chrX 45680842 45680894 -120969402 + RLTR31_Mm LTR ERVK 512 561 0 4 933 417 223 26 97 chrX 45680963 45681077 -120969219 + MT2B LTR ERVL 152 257 -344 4 933 721 195 23 0 chrX 45680981 45681109 -120969187 + B1_Mus1 SINE Alu 6 136 -12 4 933 216 67 0 0 chrX 45681109 45681139 -120969157 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 4 933 659 261 85 38 chrX 45681142 45681353 -120968943 + ID_B1 SINE B4 4 224 0 4 933 588 303 0 56 chrX 45681371 45681532 -120968764 + RSINE1 SINE B4 13 164 -1 4 933 263 303 192 24 chrX 45681631 45681756 -120968540 + B1F2 SINE Alu 1 146 -3 4 933 348 264 77 0 chrX 45681769 45681860 -120968436 + ID_B1 SINE B4 126 223 -1 4 933 275 143 0 67 chrX 45681860 45681935 -120968361 + A-rich Low_complexity Low_complexity 1 70 0 4 933 255 274 0 88 chrX 45682023 45682103 -120968193 + PB1D7 SINE Alu 32 104 -16 4 933 445 153 0 0 chrX 45682104 45682176 -120968120 + ID_B1 SINE B4 98 169 -55 4 933 419 181 75 0 chrX 45682176 45682198 -120968098 + PB1D10 SINE Alu 17 117 0 4 933 821 235 79 15 chrX 45682203 45682406 -120967890 + B3 SINE B2 1 216 0 4 933 252 239 188 29 chrX 45682406 45682544 -120967752 + L1MB5 LINE L1 5828 5987 -187 4 933 326 246 14 157 chrX 45682546 45682686 -120967610 + MT2B LTR ERVL 138 257 -344 4 933 663 190 0 57 chrX 45682590 45682713 -120967583 + B1_Mus1 SINE Alu 12 127 -21 4 933 783 289 217 0 chrX 45682742 45682977 -120967319 + B4 SINE B4 7 292 0 4 933 372 208 0 0 chrX 45682977 45683073 -120967223 + (CA)n Simple_repeat Simple_repeat 1 96 0 4 933 647 281 87 24 chrX 45683073 45683281 -120967015 + ID_B1 SINE B4 4 224 0 4 933 267 266 31 0 chrX 45683412 45683476 -120966820 - ID2 SINE ID 0 83 18 4 933 280 277 0 15 chrX 45683419 45683485 -120966811 - tRNA-Ala-GCA tRNA tRNA -7 68 4 4 933 360 97 0 0 chrX 45683753 45683815 -120966481 + (GA)n Simple_repeat Simple_repeat 2 63 0 4 933 656 202 0 25 chrX 45683938 45684060 -120966236 + PB1D7 SINE Alu 2 120 0 4 933 562 208 52 37 chrX 45684589 45684724 -120965572 + B1F SINE Alu 6 142 -7 5 933 234 150 0 0 chrX 45684726 45684766 -120965530 + (CAG)n Simple_repeat Simple_repeat 2 41 0 5 933 458 314 20 0 chrX 45684892 45684994 -120965302 - B1_Mus2 SINE Alu -43 104 1 5 933 300 284 21 93 chrX 45684914 45685011 -120965285 - MT2B LTR ERVL -362 239 150 5 933 571 256 116 28 chrX 45685077 45685258 -120965038 + B3A SINE B2 2 198 0 5 933 261 0 0 0 chrX 45685276 45685305 -120964991 + (TTA)n Simple_repeat Simple_repeat 1 29 0 5 933 189 0 0 0 chrX 45685305 45685326 -120964970 + (TAG)n Simple_repeat Simple_repeat 3 23 0 5 933 369 0 0 0 chrX 45685326 45685367 -120964929 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 933 244 186 23 0 chrX 45685417 45685460 -120964836 - RSINE1 SINE B4 -91 74 31 5 933 508 102 0 33 chrX 45685474 45685550 -120964746 + (TTTC)n Simple_repeat Simple_repeat 1 75 0 5 933 1441 84 16 0 chrX 45685550 45685740 -120964556 - B2_Mm2 SINE B2 -1 194 2 5 933 508 102 0 33 chrX 45685740 45685754 -120964542 + (TTTC)n Simple_repeat Simple_repeat 4 16 0 5 933 916 197 0 92 chrX 45685762 45685980 -120964316 - B3A SINE B2 0 198 1 5 933 509 219 150 8 chrX 45686002 45686122 -120964174 - B1_Mur2 SINE Alu -7 142 6 5 933 1040 178 71 0 chrX 45686193 45686390 -120963906 - B3 SINE B2 -4 212 2 5 933 902 224 0 6 chrX 45686401 45686576 -120963720 + B3 SINE B2 38 211 -5 5 933 792 206 14 0 chrX 45686578 45686719 -120963577 - B1_Mur3 SINE Alu -1 148 6 5 933 699 227 0 0 chrX 45686740 45686881 -120963415 + B1_Mur1 SINE Alu 1 141 -8 5 933 1241 61 0 0 chrX 45686938 45687085 -120963211 - B1_Mus2 SINE Alu 0 147 1 5 933 279 272 53 21 chrX 45687135 45687229 -120963067 - MIRb SINE MIR -112 156 60 5 933 225 65 0 0 chrX 45687295 45687326 -120962970 + (TTTTTG)n Simple_repeat Simple_repeat 3 33 0 5 933 839 30 0 0 chrX 45687329 45687428 -120962868 - B1_Mus2 SINE Alu 0 147 49 5 933 1199 61 0 0 chrX 45687456 45687603 -120962693 + B1_Mus2 SINE Alu 1 147 0 5 933 189 107 0 0 chrX 45687603 45687631 -120962665 + (A)n Simple_repeat Simple_repeat 1 28 0 5 933 758 281 24 15 chrX 45687631 45687837 -120962459 + B3 SINE B2 9 216 0 5 933 905 138 0 21 chrX 45687905 45688046 -120962250 + B1_Mur4 SINE Alu 5 142 -8 5 933 222 241 74 0 chrX 45688062 45688116 -120962180 + PB1 SINE Alu 67 124 -3 5 933 3754 104 15 20 chrX 45688388 45688935 -120961361 - Lx4A LINE L1 -3 7055 6512 5 933 1166 88 0 0 chrX 45688960 45689108 -120961188 + B1_Mus1 SINE Alu 1 148 0 5 933 1385 91 21 0 chrX 45689138 45689325 -120960971 + B2_Mm2 SINE B2 2 192 -3 5 933 270 115 0 0 chrX 45689676 45689728 -120960568 + (T)n Simple_repeat Simple_repeat 1 52 0 5 933 409 298 9 130 chrX 45689728 45689742 -120960554 - B2_Mm2 SINE B2 0 195 182 5 933 1165 68 0 39 chrX 45689742 45689895 -120960401 - B1_Mus2 SINE Alu 0 147 1 5 933 721 275 15 20 chrX 45689895 45690096 -120960200 - B3A SINE B2 0 198 6 5 933 734 136 32 103 chrX 45690170 45690326 -120959970 - B1_Mus2 SINE Alu -1 146 2 5 933 308 312 13 25 chrX 45690347 45690426 -120959870 - B1F1 SINE Alu -71 78 1 5 933 490 292 7 40 chrX 45690432 45690453 -120959843 + ID_B1 SINE B4 70 214 -10 5 933 718 209 0 0 chrX 45690453 45690582 -120959714 + B1_Mur1 SINE Alu 11 139 -10 5 933 252 234 68 176 chrX 45690482 45690586 -120959710 + RLTR25B LTR ERVK 441 543 -485 5 933 267 54 0 0 chrX 45690586 45690623 -120959673 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 5 933 252 234 68 176 chrX 45690623 45690694 -120959602 + RLTR25B LTR ERVK 544 596 -432 5 933 536 173 114 9 chrX 45690656 45690761 -120959535 + B1_Mur1 SINE Alu 34 149 0 5 933 230 0 33 0 chrX 45690764 45690794 -120959502 + (CCAA)n Simple_repeat Simple_repeat 2 32 0 5 933 260 339 74 25 chrX 45692179 45692300 -120957996 + MIRc SINE MIR 9 135 -133 5 933 210 309 71 0 chrX 45692312 45692396 -120957900 + MIRc SINE MIR 178 267 -1 5 933 300 154 0 0 chrX 45694210 45694262 -120956034 + A-rich Low_complexity Low_complexity 1 52 0 5 933 21 0 0 0 chrX 45694702 45694723 -120955573 + GC_rich Low_complexity Low_complexity 1 21 0 5 933 239 310 20 14 chrX 45694948 45695095 -120955201 + (CGGGG)n Simple_repeat Simple_repeat 5 152 0 5 933 417 39 0 0 chrX 45695287 45695338 -120954958 + (CGG)n Simple_repeat Simple_repeat 3 53 0 5 933 205 29 0 56 chrX 45696631 45696667 -120953629 + (TCCCC)n Simple_repeat Simple_repeat 2 35 0 5 933 221 286 0 0 chrX 45696726 45696782 -120953514 + C-rich Low_complexity Low_complexity 3 58 0 5 933 210 37 0 0 chrX 45696904 45696931 -120953365 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 933 202 197 26 26 chrX 45698404 45698482 -120951814 + (CGGGG)n Simple_repeat Simple_repeat 3 80 0 5 933 366 173 0 0 chrX 45698482 45698557 -120951739 + (CCG)n Simple_repeat Simple_repeat 3 77 0 5 933 804 150 8 8 chrX 45700250 45700378 -120949918 + B1_Mur4 SINE Alu 15 142 -8 5 933 225 0 0 0 chrX 45700664 45700689 -120949607 + (T)n Simple_repeat Simple_repeat 1 25 0 5 933 246 225 145 66 chrX 45701291 45701367 -120948929 + ID4_ SINE ID 2 83 0 5 933 23 0 0 0 chrX 45702590 45702613 -120947683 + AT_rich Low_complexity Low_complexity 1 23 0 5 933 439 250 16 62 chrX 45702621 45702744 -120947552 - B1_Mur2 SINE Alu 0 120 1 5 933 429 286 159 20 chrX 45703316 45703518 -120946778 + MIRb SINE MIR 36 263 -5 5 933 279 264 54 54 chrX 45703699 45703811 -120946485 - AmnSINE1 SINE SINE -101 474 363 5 933 614 173 2 7 chrX 45703809 45703931 -120946365 - B3A SINE B2 -95 121 2 5 933 643 233 40 20 chrX 45704611 45704760 -120945536 - RSINE1 SINE B4 0 165 14 5 933 648 248 0 8 chrX 45704764 45704886 -120945410 - PB1 SINE Alu 0 127 7 5 933 337 309 107 29 chrX 45704772 45704912 -120945384 - B4A SINE B4 -73 219 69 5 933 760 256 22 6 chrX 45705565 45705746 -120944550 - B3A SINE B2 -14 184 1 5 933 290 132 0 19 chrX 45706211 45706265 -120944031 + CT-rich Low_complexity Low_complexity 2 54 0 5 933 406 206 0 0 chrX 45706265 45706338 -120943958 - B1F SINE Alu -1 148 76 5 933 276 341 97 82 chrX 45706374 45706642 -120943654 + MARNA DNA Mariner 292 563 -23 5 933 250 372 114 27 chrX 45706510 45706659 -120943637 - MARNA DNA Mariner -419 167 6 5 933 1408 44 6 0 chrX 45706912 45707092 -120943204 - L1Md_F2 LINE L1 0 6582 6402 5 933 526 283 0 28 chrX 45707985 45708127 -120942169 + B1F SINE Alu 10 147 -2 5 933 569 333 0 0 chrX 45708129 45708273 -120942023 + ID_B1 SINE B4 81 224 0 5 933 754 228 14 14 chrX 45708385 45708532 -120941764 - B1_Mus1 SINE Alu 0 148 2 5 933 210 71 0 0 chrX 45708893 45708921 -120941375 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 5 933 212 290 29 14 chrX 45709607 45709677 -120940619 + MER5B DNA MER1_type 73 143 -35 5 933 657 224 38 32 chrX 45709985 45710139 -120940157 + B3A SINE B2 1 148 -45 5 933 321 26 0 0 chrX 45710139 45710177 -120940119 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 933 333 256 79 90 chrX 45710177 45710211 -120940085 + B2_Mm1t SINE B2 149 187 -6 5 933 430 132 15 0 chrX 45710490 45710558 -120939738 + B1_Mur4 SINE Alu 1 69 -81 5 933 841 104 24 0 chrX 45710549 45710674 -120939622 - B1_Mur3 SINE Alu -7 142 15 5 933 212 195 0 0 chrX 45710675 45710716 -120939580 - PB1D10 SINE Alu -20 97 57 5 933 612 259 84 133 chrX 45710797 45711225 -120939071 - LTR37A LTR ERV1 0 426 20 5 933 180 111 43 22 chrX 45711489 45711535 -120938761 + GA-rich Low_complexity Low_complexity 2 48 0 5 933 196 349 48 0 chrX 45711587 45711670 -120938626 - L2c LINE L2 -252 3135 3049 5 933 241 342 88 48 chrX 45711865 45712528 -120937768 - L2c LINE L2 -641 2778 2090 5 933 206 287 19 29 chrX 45712612 45712716 -120937580 + GA-rich Low_complexity Low_complexity 2 104 0 5 933 461 181 22 2 chrX 45712850 45712959 -120937337 + Lx4B LINE L1 6519 6631 -427 5 933 1063 170 97 13 chrX 45712958 45713185 -120937111 + Lx4B LINE L1 6809 7054 -4 5 933 21 36 0 0 chrX 45713197 45713225 -120937071 + AT_rich Low_complexity Low_complexity 1 28 0 5 933 461 340 129 41 chrX 45713318 45713760 -120936536 + L2a LINE L2 2945 3425 -1 5 933 619 229 0 0 chrX 45715639 45715757 -120934539 + RSINE1 SINE B4 12 129 -36 5 933 414 0 0 0 chrX 45715922 45715968 -120934328 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 933 230 312 0 0 chrX 45715970 45716034 -120934262 - tRNA-Ala-GCY_ tRNA tRNA -11 64 1 5 933 509 278 21 7 chrX 45716449 45716594 -120933702 + B1F SINE Alu 1 147 -2 5 933 453 277 28 35 chrX 45716879 45717021 -120933275 - B1F1 SINE Alu -2 147 7 5 933 995 244 0 5 chrX 45717067 45717273 -120933023 - B3 SINE B2 -11 205 1 5 933 440 222 111 0 chrX 45717287 45717386 -120932910 - PB1D10 SINE Alu -7 110 1 5 933 23 0 0 0 chrX 45718259 45718282 -120932014 + AT_rich Low_complexity Low_complexity 1 23 0 5 933 470 242 99 53 chrX 45719709 45719840 -120930456 - B1_Mur2 SINE Alu -3 146 10 5 933 272 287 98 10 chrX 45719859 45719961 -120930335 - PB1D10 SINE Alu -6 111 1 5 933 365 380 0 0 chrX 45721748 45721992 -120928304 + C-rich Low_complexity Low_complexity 1 244 0 5 933 416 287 82 0 chrX 45724619 45724741 -120925555 + MIRb SINE MIR 65 196 -72 5 933 428 273 169 14 chrX 45724744 45724963 -120925333 + L1MB8 LINE L1 5920 6172 -6 5 933 188 250 108 15 chrX 45724966 45725031 -120925265 + MIRb SINE MIR 187 257 -11 5 933 326 265 135 8 chrX 45726247 45726380 -120923916 - MTEa LTR MaLR 0 359 210 5 933 206 128 26 0 chrX 45726392 45726431 -120923865 + GA-rich Low_complexity Low_complexity 1 40 0 5 933 757 270 120 26 chrX 45726527 45726793 -120923503 - B4 SINE B4 -1 291 1 6 933 386 306 6 108 chrX 45726807 45726983 -120923313 - MTEa LTR MaLR -214 165 8 5 933 189 0 0 0 chrX 45726992 45727013 -120923283 + (TTG)n Simple_repeat Simple_repeat 2 22 0 6 933 773 139 0 50 chrX 45727023 45727144 -120923152 - B1_Mur3 SINE Alu -34 115 1 6 933 244 289 0 66 chrX 45727144 45727181 -120923115 - ORR1B1-int LTR MaLR -870 639 613 6 933 217 234 2 80 chrX 45727518 45727600 -120922696 + MIRc SINE MIR 74 151 -57 6 933 216 175 0 0 chrX 45729049 45729112 -120921184 + T-rich Low_complexity Low_complexity 1 63 0 6 933 1333 70 43 5 chrX 45729112 45729299 -120920997 - B2_Mm2 SINE B2 0 195 2 6 933 180 0 0 0 chrX 45729343 45729363 -120920933 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 6 933 297 0 0 0 chrX 45729364 45729397 -120920899 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 6 933 1155 75 0 33 chrX 45729397 45729536 -120920760 - B1_Mus1 SINE Alu -9 139 1 6 933 231 36 0 0 chrX 45729869 45729897 -120920399 + (T)n Simple_repeat Simple_repeat 1 28 0 6 933 1639 26 0 15 chrX 45729916 45730111 -120920185 - B2_Mm1a SINE B2 0 193 2 6 933 920 310 48 0 chrX 45730834 45731102 -120919194 + Tigger14a DNA MER2_type 44 324 0 6 933 575 234 9 0 chrX 45732829 45732940 -120917356 + PB1D10 SINE Alu 1 112 -5 6 933 225 0 0 0 chrX 45733281 45733306 -120916990 + (A)n Simple_repeat Simple_repeat 1 25 0 6 933 249 173 0 58 chrX 45733777 45733863 -120916433 + CT-rich Low_complexity Low_complexity 2 82 0 6 933 831 193 0 21 chrX 45733875 45734018 -120916278 - B1_Mur4 SINE Alu 0 150 11 6 933 191 383 34 25 chrX 45734097 45734215 -120916081 - L3 LINE CR1 -81 4408 4290 6 933 24 0 0 0 chrX 45734298 45734322 -120915974 + AT_rich Low_complexity Low_complexity 1 24 0 6 933 1131 22 0 43 chrX 45734322 45734462 -120915834 - B1_Mm SINE Alu -13 134 1 6 933 913 207 38 14 chrX 45734472 45734683 -120915613 - B3 SINE B2 0 216 1 6 933 764 229 14 7 chrX 45735144 45735289 -120915007 + B1_Mur1 SINE Alu 2 147 -2 6 933 956 129 7 0 chrX 45735289 45735435 -120914861 + B1_Mus1 SINE Alu 1 148 0 6 933 321 185 158 12 chrX 45735452 45735534 -120914762 + PB1D9 SINE Alu 27 120 0 6 933 335 296 72 10 chrX 45735543 45735751 -120914545 + Lx7 LINE L1 7192 7412 -284 6 933 490 224 9 27 chrX 45735971 45736081 -120914215 - B1_Mur4 SINE Alu -2 148 41 6 933 240 188 85 96 chrX 45736369 45736463 -120913833 + B4 SINE B4 200 292 0 6 933 371 244 129 8 chrX 45738139 45738271 -120912025 + MIRc SINE MIR 94 241 -27 6 933 528 227 128 70 chrX 45738480 45738730 -120911566 - B4 SINE B4 0 292 24 6 933 235 278 55 14 chrX 45739844 45739917 -120910379 + PB1 SINE Alu 33 108 -19 6 933 583 347 131 33 chrX 45740136 45740502 -120909794 - MLT1F LTR MaLR -20 540 120 6 933 286 336 155 44 chrX 45740601 45740897 -120909399 - MLT1F-int LTR MaLR -1 1488 1160 6 933 320 315 39 83 chrX 45740958 45741016 -120909280 - MIRb SINE MIR -116 152 96 6 933 1351 82 0 42 chrX 45741016 45741208 -120909088 - B2_Mm2 SINE B2 -10 185 2 6 933 320 315 39 83 chrX 45741208 45741305 -120908991 - MIRb SINE MIR -173 95 4 6 933 3425 41 0 2 chrX 45741615 45742010 -120908286 - MTA_Mm LTR MaLR -2 394 1 6 933 1410 68 0 13 chrX 45742920 45743217 -120907079 + (TTCC)n Simple_repeat Simple_repeat 1 293 0 6 933 802 122 0 31 chrX 45743219 45743346 -120906950 - B1_Mus2 SINE Alu -23 124 2 6 933 322 296 41 38 chrX 45743465 45743485 -120906811 + B1_Mur3 SINE Alu 9 80 -69 6 933 470 242 0 0 chrX 45743485 45743576 -120906720 + ID_B1 SINE B4 107 197 -27 6 933 322 296 41 38 chrX 45743576 45743587 -120906709 + B1_Mur3 SINE Alu 81 128 -21 6 934 615 256 147 64 chrX 45744292 45744451 -120905845 + ID_B1 SINE B4 3 185 -39 6 934 1233 48 0 7 chrX 45744451 45744599 -120905697 + B1_Mus1 SINE Alu 2 148 0 6 934 615 256 147 64 chrX 45744599 45744643 -120905653 + ID_B1 SINE B4 186 223 -1 6 934 519 290 110 7 chrX 45745627 45745773 -120904523 + RSINE1 SINE B4 3 163 -2 6 934 736 191 80 7 chrX 45748023 45748160 -120902136 - B1_Mur3 SINE Alu -1 148 2 6 934 436 267 31 151 chrX 45748270 45748429 -120901867 - B1F2 SINE Alu -8 141 2 6 934 307 200 11 138 chrX 45748515 45748602 -120901694 + B1F SINE Alu 74 149 0 6 934 201 152 0 0 chrX 45748887 45748920 -120901376 + (TTG)n Simple_repeat Simple_repeat 2 34 0 6 934 1198 35 7 14 chrX 45749659 45749806 -120900490 + B1_Mus1 SINE Alu 2 147 -1 6 934 570 299 124 7 chrX 45749916 45750189 -120900107 - L1MB5 LINE L1 -58 6116 5812 6 934 537 248 38 15 chrX 45750245 45750376 -120899920 - RSINE1 SINE B4 -29 136 3 6 934 264 355 19 0 chrX 45750810 45750917 -120899379 + MARNA DNA Mariner 333 441 -145 6 934 236 283 10 62 chrX 45751096 45751194 -120899102 - L2a LINE L2 -17 3409 3266 6 934 575 254 40 20 chrX 45751934 45752183 -120898113 - L1MB7 LINE L1 -2 6178 5917 6 934 396 0 0 0 chrX 45752183 45752227 -120898069 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 934 639 223 54 17 chrX 45752357 45752574 -120897722 - L1MB7 LINE L1 -278 5906 5652 6 934 307 352 109 71 chrX 45752689 45752900 -120897396 - B4 SINE B4 -65 227 9 6 934 344 282 205 60 chrX 45752980 45753066 -120897230 - ID_B1 SINE B4 0 224 111 6 934 369 0 0 0 chrX 45753066 45753107 -120897189 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 934 365 248 57 9 chrX 45753107 45753126 -120897170 - PB1D10 SINE Alu -88 29 9 6 934 344 282 205 60 chrX 45753126 45753205 -120897091 - ID_B1 SINE B4 -114 110 15 6 934 334 254 161 83 chrX 45753342 45753522 -120896774 - Charlie8 DNA MER1_type -2138 290 97 6 934 22 0 0 0 chrX 45754138 45754160 -120896136 + AT_rich Low_complexity Low_complexity 1 22 0 6 934 333 300 165 23 chrX 45754199 45754216 -120896080 - B4A SINE B4 -56 236 220 6 934 216 0 0 0 chrX 45754216 45754240 -120896056 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 934 574 197 0 4 chrX 45754240 45754354 -120895942 - PB1D9 SINE Alu -9 111 1 6 934 333 291 177 41 chrX 45754354 45754376 -120895920 - B4A SINE B4 -73 219 63 6 934 1020 201 75 5 chrX 45755745 45755945 -120894351 + B3 SINE B2 1 214 -2 6 934 933 218 11 27 chrX 45756211 45756395 -120893901 - B3 SINE B2 -35 181 1 6 934 670 179 97 0 chrX 45756559 45756693 -120893603 - B1_Mur1 SINE Alu 0 149 3 6 934 648 221 84 0 chrX 45757148 45757279 -120893017 + B1_Mur1 SINE Alu 1 142 -7 6 934 644 241 91 71 chrX 45757287 45757439 -120892857 + B3 SINE B2 2 170 -46 6 934 1175 44 0 0 chrX 45757439 45757575 -120892721 + B1_Mus1 SINE Alu 4 139 -9 6 934 233 29 29 0 chrX 45757575 45757609 -120892687 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 934 644 241 91 71 chrX 45757609 45757665 -120892631 + B3 SINE B2 171 214 -2 6 934 591 189 0 35 chrX 45757783 45757898 -120892398 - B1_Mus2 SINE Alu -36 111 1 6 934 291 28 0 0 chrX 45759953 45759989 -120890307 + (TCCC)n Simple_repeat Simple_repeat 2 37 0 6 934 213 178 0 0 chrX 45760770 45760815 -120889481 + A-rich Low_complexity Low_complexity 1 45 0 6 934 288 53 0 0 chrX 45761002 45761040 -120889256 + (TA)n Simple_repeat Simple_repeat 1 38 0 6 934 224 146 36 18 chrX 45761092 45761148 -120889148 + T-rich Low_complexity Low_complexity 1 57 0 6 934 1256 34 7 0 chrX 45761735 45761881 -120888415 - B1_Mm SINE Alu 0 147 1 6 934 316 308 0 28 chrX 45762211 45762318 -120887978 + PB1D9 SINE Alu 8 111 -9 6 934 415 250 109 18 chrX 45762320 45762430 -120887866 + PB1D9 SINE Alu 1 120 0 6 934 324 0 0 0 chrX 45762932 45762968 -120887328 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 934 496 229 253 67 chrX 45763907 45764085 -120886211 + ID_B1 SINE B4 3 213 -11 6 934 732 229 31 78 chrX 45764222 45764465 -120885831 - L2c LINE L2 -1 3386 3152 6 934 431 300 124 6 chrX 45765934 45766095 -120884201 + ID_B1 SINE B4 2 181 -43 6 934 234 81 0 0 chrX 45766174 45766211 -120884085 + (TTCC)n Simple_repeat Simple_repeat 1 37 0 6 934 189 0 0 0 chrX 45769201 45769222 -120881074 + (CAGA)n Simple_repeat Simple_repeat 3 23 0 6 934 270 0 0 0 chrX 45769373 45769403 -120880893 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 934 396 0 0 0 chrX 45769403 45769446 -120880850 + (GA)n Simple_repeat Simple_repeat 1 44 0 6 934 209 125 25 0 chrX 45769466 45769506 -120880790 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 934 776 162 14 22 chrX 45769521 45769660 -120880636 - B3A SINE B2 -60 138 1 6 934 1225 65 0 0 chrX 45770515 45770669 -120879627 + B2_Mm2 SINE B2 3 156 -39 6 934 585 0 0 0 chrX 45770672 45770737 -120879559 + (GAAA)n Simple_repeat Simple_repeat 4 68 0 6 934 297 297 80 18 chrX 45772687 45772800 -120877496 - MIR3 SINE MIR -31 177 58 6 934 196 205 0 43 chrX 45772773 45772819 -120877477 + L2c LINE L2 3336 3379 -8 6 934 1620 35 0 5 chrX 45773071 45773271 -120877025 + L1Md_A LINE L1 6384 6582 0 6 934 689 241 0 27 chrX 45774194 45774343 -120875953 - RSINE1 SINE B4 -19 146 2 6 934 390 233 0 0 chrX 45774439 45774512 -120875784 - ID4_ SINE ID -8 75 3 6 934 1420 81 5 5 chrX 45774619 45774806 -120875490 + B2_Mm2 SINE B2 1 187 -8 6 934 525 349 47 5 chrX 45774807 45775020 -120875276 + MIR SINE MIR 14 235 -27 6 934 707 274 37 28 chrX 45775067 45775281 -120875015 - B3 SINE B2 0 216 1 6 934 1202 41 7 0 chrX 45775374 45775520 -120874776 - B1_Mus2 SINE Alu 0 147 1 6 934 378 0 0 0 chrX 45775719 45775761 -120874535 + (TC)n Simple_repeat Simple_repeat 2 43 0 6 934 216 0 0 0 chrX 45775761 45775784 -120874512 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 934 482 103 0 13 chrX 45775784 45775863 -120874433 + (GA)n Simple_repeat Simple_repeat 2 79 0 6 934 358 310 11 0 chrX 45779343 45779430 -120870866 + PB1D7 SINE Alu 6 93 -27 6 934 731 302 64 89 chrX 45779435 45779715 -120870581 + B4 SINE B4 2 274 -18 7 934 346 330 0 0 chrX 45782044 45782150 -120868146 + PB1D10 SINE Alu 1 106 -11 7 934 1148 22 0 21 chrX 45782150 45782292 -120868004 + B1_Mm SINE Alu 9 147 0 7 934 326 111 0 0 chrX 45782321 45782366 -120867930 + ID SINE ID 2 46 -178 7 934 270 228 17 129 chrX 45782366 45782437 -120867859 + BC1_Mm scRNA scRNA 2 104 -48 7 934 274 336 37 28 chrX 45782435 45782542 -120867754 + ID_B1 SINE B4 50 157 -67 7 934 185 367 25 25 chrX 45783167 45783248 -120867048 - L4 LINE RTE -871 1158 1078 7 934 504 240 10 0 chrX 45783368 45783486 -120866810 - B1F SINE Alu -1 119 1 7 934 180 0 0 0 chrX 45783582 45783602 -120866694 + (GGAAA)n Simple_repeat Simple_repeat 2 21 0 7 934 341 238 114 38 chrX 45783642 45783747 -120866549 + PB1 SINE Alu 1 113 -14 7 934 935 137 20 27 chrX 45783788 45783938 -120866358 + B1_Mur4 SINE Alu 1 149 -1 7 934 358 326 106 7 chrX 45784274 45784416 -120865880 + RSINE1 SINE B4 2 157 -8 7 934 237 189 111 42 chrX 45784588 45784660 -120865636 - PB1D10 SINE Alu 0 117 41 7 934 721 156 21 43 chrX 45785537 45785678 -120864618 + B1_Mur1 SINE Alu 12 149 0 7 934 307 283 0 75 chrX 45785926 45786033 -120864263 + MER58B DNA MER1_type 98 196 -145 7 934 282 258 15 0 chrX 45786058 45786124 -120864172 + MER58B DNA MER1_type 276 341 0 7 934 309 262 164 7 chrX 45786271 45786417 -120863879 + MIR3 SINE MIR 18 186 -22 7 934 282 300 0 0 chrX 45788046 45788106 -120862190 + RSINE1 SINE B4 106 165 0 7 934 797 258 21 27 chrX 45788127 45788314 -120861982 + B3A SINE B2 11 196 -2 7 934 447 250 225 11 chrX 45788338 45788516 -120861780 + B3 SINE B2 1 216 0 7 934 29 28 0 0 chrX 45788531 45788567 -120861729 + AT_rich Low_complexity Low_complexity 1 36 0 7 934 299 206 0 22 chrX 45789206 45789283 -120861013 - ID4_ SINE ID -58 94 22 7 934 322 240 133 0 chrX 45789280 45789355 -120860941 - B1_Mur3 SINE Alu -64 85 1 7 934 349 239 35 52 chrX 45789359 45789474 -120860822 - PB1D10 SINE Alu -2 115 3 7 934 198 0 0 0 chrX 45789481 45789503 -120860793 + (T)n Simple_repeat Simple_repeat 1 22 0 7 934 1179 42 0 0 chrX 45789503 45789646 -120860650 - B1_Mus1 SINE Alu 0 148 6 7 934 428 208 18 90 chrX 45789548 45789659 -120860637 - MT2B LTR ERVL -344 257 155 7 934 316 286 7 0 chrX 45789659 45789692 -120860604 - ORR1B1-int LTR MaLR -750 727 605 7 934 425 312 34 34 chrX 45789875 45790024 -120860272 - B1F1 SINE Alu 0 149 1 7 934 389 336 32 52 chrX 45790030 45790184 -120860112 - MIRb SINE MIR -117 151 1 7 934 318 268 53 77 chrX 45790766 45790893 -120859403 + L1MB8 LINE L1 5979 6102 -76 7 934 195 42 0 0 chrX 45790893 45790917 -120859379 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 7 934 318 274 60 70 chrX 45790917 45790988 -120859308 + L1MB8 LINE L1 6103 6179 -5 7 934 226 208 20 20 chrX 45791031 45791080 -120859216 - RSINE1 SINE B4 -35 130 82 7 934 487 256 109 23 chrX 45791376 45791504 -120858792 - ID_B1 SINE B4 -1 223 85 7 934 194 229 0 111 chrX 45791788 45791842 -120858454 + MIRc SINE MIR 99 146 -122 7 934 278 330 0 32 chrX 45791810 45791904 -120858392 + MIR3 SINE MIR 112 202 -6 7 934 495 203 0 19 chrX 45793456 45793569 -120856727 + PB1D9 SINE Alu 17 121 -28 7 934 865 269 47 0 chrX 45793573 45793785 -120856511 + ID_B1 SINE B4 2 223 -1 7 934 437 205 0 78 chrX 45793865 45793974 -120856322 + PB1D9 SINE Alu 14 110 -10 7 934 27 0 0 0 chrX 45793975 45794002 -120856294 + AT_rich Low_complexity Low_complexity 1 27 0 7 934 286 23 47 0 chrX 45794266 45794309 -120855987 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 7 934 1162 106 71 11 chrX 45794421 45794603 -120855693 - B2_Mm2 SINE B2 -2 193 1 7 934 454 190 70 27 chrX 45794630 45794748 -120855548 - PB1D10 SINE Alu 0 148 7 7 934 256 288 13 40 chrX 45794680 45794756 -120855540 - MT2B2 LTR ERVL -343 241 168 7 934 361 311 0 47 chrX 45794786 45794914 -120855382 - PB1 SINE Alu -4 123 2 7 934 480 257 10 0 chrX 45796074 45796175 -120854121 - PB1D10 SINE Alu -15 102 1 7 934 249 305 0 45 chrX 45796761 45796871 -120853425 + L1MD LINE L1 5335 5439 -920 7 934 238 245 160 0 chrX 45796884 45796978 -120853318 + L1MD3 LINE L1 4993 5101 -1045 7 934 305 309 0 36 chrX 45797018 45797029 -120853267 + ID4 SINE ID 3 31 -52 7 934 306 246 0 0 chrX 45797029 45797086 -120853210 + tRNA-Ala-GCY_ tRNA tRNA 8 64 -11 7 934 305 309 0 36 chrX 45797086 45797102 -120853194 + ID4 SINE ID 32 83 0 7 934 325 242 30 0 chrX 45797155 45797221 -120853075 + ID_B1 SINE B4 79 146 -78 7 934 989 269 55 72 chrX 45797286 45797553 -120852743 + L1MD3 LINE L1 5323 5609 -570 7 934 1158 69 0 7 chrX 45797553 45797699 -120852597 + B1_Mus1 SINE Alu 3 147 -1 7 934 989 269 55 75 chrX 45797699 45797951 -120852345 + L1MD3 LINE L1 5607 5823 -356 7 934 574 214 14 21 chrX 45797951 45798094 -120852202 + B1_Mur2 SINE Alu 2 143 -6 7 934 786 248 44 58 chrX 45798094 45798471 -120851825 + L1MD3 LINE L1 5819 6326 -8 7 934 204 67 0 0 chrX 45798992 45799022 -120851274 + (TCTTG)n Simple_repeat Simple_repeat 2 31 0 7 934 489 138 0 0 chrX 45799039 45799119 -120851177 + (TCCC)n Simple_repeat Simple_repeat 3 82 0 7 934 306 0 0 0 chrX 45799121 45799155 -120851141 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 7 934 1281 107 37 16 chrX 45799353 45799543 -120850753 + B2_Mm2 SINE B2 2 195 0 7 934 647 236 29 0 chrX 45800030 45800170 -120850126 - B1F1 SINE Alu -5 144 1 7 934 348 127 0 0 chrX 45800313 45800368 -120849928 + (CA)n Simple_repeat Simple_repeat 1 55 0 7 934 614 298 7 7 chrX 45800414 45800556 -120849740 - RSINE1 SINE B4 -21 144 3 7 934 621 266 27 33 chrX 45800602 45800785 -120849511 - B3A SINE B2 -16 182 1 7 934 352 254 301 27 chrX 45801131 45801317 -120848979 - MIRb SINE MIR -14 254 18 7 934 1215 68 0 0 chrX 45801521 45801668 -120848628 - B1_Mus2 SINE Alu 0 147 1 7 934 706 155 0 9 chrX 45801675 45801786 -120848510 - B1_Mur3 SINE Alu -6 143 34 7 934 881 77 0 0 chrX 45802285 45802393 -120847903 + B1_Mus1 SINE Alu 30 137 -11 7 934 234 0 0 0 chrX 45802393 45802419 -120847877 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7 934 211 271 0 0 chrX 45802583 45802631 -120847665 + CT-rich Low_complexity Low_complexity 4 51 0 7 934 368 328 53 30 chrX 45802753 45802885 -120847411 - MamSINE1 SINE tRNA -65 225 91 7 934 277 235 22 45 chrX 45803126 45803215 -120847081 + MIRm SINE MIR 184 270 -6 7 934 1157 86 109 0 chrX 45803928 45804102 -120846194 - B2_Mm2 SINE B2 -1 194 2 7 934 1197 171 55 0 chrX 45804127 45804326 -120845970 - B3 SINE B2 -6 210 1 7 934 292 236 0 0 chrX 45804707 45804762 -120845534 - MIR SINE MIR -172 90 36 7 934 369 0 0 0 chrX 45806283 45806324 -120843972 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 934 237 65 0 0 chrX 45806538 45806569 -120843727 + (CCG)n Simple_repeat Simple_repeat 3 33 0 7 934 26 50 0 0 chrX 45806877 45806917 -120843379 + GC_rich Low_complexity Low_complexity 1 40 0 7 934 257 194 32 0 chrX 45806973 45807035 -120843261 + (CCCG)n Simple_repeat Simple_repeat 4 67 0 7 934 23 0 0 0 chrX 45807070 45807093 -120843203 + GC_rich Low_complexity Low_complexity 1 23 0 7 934 207 0 0 0 chrX 45807118 45807141 -120843155 + (CCG)n Simple_repeat Simple_repeat 2 24 0 7 934 407 118 0 13 chrX 45807364 45807441 -120842855 + (CA)n Simple_repeat Simple_repeat 2 77 0 7 934 206 245 10 31 chrX 45807474 45807571 -120842725 + GA-rich Low_complexity Low_complexity 2 96 0 7 934 203 0 0 36 chrX 45808025 45808053 -120842243 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 7 934 272 259 18 173 chrX 45808861 45808893 -120841403 + MT2B LTR ERVL 139 275 -321 7 934 592 236 15 30 chrX 45808893 45809024 -120841272 + B1_Mur1 SINE Alu 1 129 -20 7 934 180 0 0 0 chrX 45809048 45809068 -120841228 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7 934 811 233 95 5 chrX 45809080 45809270 -120841026 + B3 SINE B2 3 209 -7 7 934 615 231 44 22 chrX 45809292 45809429 -120840867 + B1F2 SINE Alu 1 140 -9 7 934 1190 183 14 0 chrX 45809440 45809653 -120840643 + B3 SINE B2 1 216 0 7 934 1466 89 5 0 chrX 45811048 45811239 -120839057 - B2_Mm1t SINE B2 -1 192 1 7 934 409 331 45 32 chrX 45811313 45811469 -120838827 + RSINE1 SINE B4 8 165 0 7 934 316 363 49 0 chrX 45811621 45811723 -120838573 + PB1D7 SINE Alu 9 115 -5 7 934 300 335 80 95 chrX 45811813 45812077 -120838219 + B4 SINE B4 33 292 0 7 934 195 162 0 0 chrX 45812927 45812964 -120837332 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 934 845 223 0 48 chrX 45815155 45815362 -120834934 + B3A SINE B2 2 198 0 7 934 212 351 92 20 chrX 45815494 45815689 -120834607 + MamSINE1 SINE tRNA 53 261 -29 7 934 1037 126 150 0 chrX 45817245 45817412 -120832884 - B2_Mm2 SINE B2 -2 193 2 7 934 471 229 31 0 chrX 45817481 45817577 -120832719 - B3A SINE B2 -99 99 1 7 934 297 0 0 0 chrX 45817644 45817677 -120832619 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 934 1272 59 53 12 chrX 45818010 45818181 -120832115 + B2_Mm1t SINE B2 2 179 -14 7 934 474 58 0 10 chrX 45818194 45818307 -120831989 + B2_Mm2 SINE B2 47 194 -1 7 934 761 160 64 0 chrX 45818459 45818584 -120831712 + B1_Mus1 SINE Alu 1 133 -15 7 934 1123 87 0 0 chrX 45818907 45819057 -120831239 + B2_Mm2 SINE B2 1 150 -45 7 934 298 358 79 14 chrX 45819448 45819587 -120830709 + L2c LINE L2 3213 3360 -27 8 934 1373 240 81 103 chrX 45819808 45820063 -120830233 - MER90a LTR ERV1 0 614 368 8 934 564 185 143 0 chrX 45820063 45820182 -120830114 - B1_Mur2 SINE Alu -9 140 5 8 934 1373 240 81 103 chrX 45820182 45820554 -120829742 - MER90a LTR ERV1 -247 367 1 8 934 22 35 0 0 chrX 45821969 45821998 -120828298 + AT_rich Low_complexity Low_complexity 1 29 0 8 934 791 187 22 0 chrX 45822048 45822187 -120828109 - B1_Mur3 SINE Alu -7 142 1 8 934 511 235 176 0 chrX 45822390 45822509 -120827787 + RSINE1 SINE B4 6 145 -20 8 934 535 211 139 8 chrX 45822778 45822907 -120827389 + B1_Mus2 SINE Alu 2 147 0 8 934 447 248 160 0 chrX 45823021 45823146 -120827150 - B1_Mm SINE Alu -2 145 1 8 934 567 321 46 25 chrX 45823227 45823511 -120826785 - B4A SINE B4 -2 290 1 8 934 376 228 120 0 chrX 45823529 45823621 -120826675 - B1_Mur2 SINE Alu -45 104 2 8 934 525 183 38 19 chrX 45823793 45823899 -120826397 - B1_Mur1 SINE Alu -5 144 37 8 934 1122 291 91 3 chrX 45823962 45824337 -120825959 + Lx6 LINE L1 6947 7354 -106 8 934 883 200 192 11 chrX 45824637 45824819 -120825477 + B3 SINE B2 2 216 0 8 934 317 220 0 0 chrX 45824895 45824954 -120825342 - BC1_Mm scRNA scRNA -81 71 13 8 934 1245 39 0 13 chrX 45824985 45825142 -120825154 + B2_Mm2 SINE B2 2 156 -39 8 934 616 96 150 42 chrX 45825141 45825261 -120825035 + B2_Mm2 SINE B2 63 195 0 8 934 21 36 0 0 chrX 45825274 45825302 -120824994 + AT_rich Low_complexity Low_complexity 1 28 0 8 934 1484 43 10 56 chrX 45825303 45825500 -120824796 - B2_Mm1a SINE B2 -4 189 2 8 934 310 258 0 0 chrX 45825514 45825576 -120824720 - tRNA-Ala-GCY_ tRNA tRNA -7 68 7 8 934 422 301 49 49 chrX 45825590 45825754 -120824542 + ID_B1 SINE B4 58 221 -3 8 934 225 0 0 0 chrX 45825804 45825829 -120824467 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 934 470 233 89 15 chrX 45825880 45826015 -120824281 + B1_Mur1 SINE Alu 5 149 0 8 934 4412 52 1 9 chrX 45826093 45826729 -120823567 - L1_Mus2 LINE L1 -625 5941 5310 8 934 4967 55 11 2 chrX 45826729 45827347 -120822949 + L1_Mus2 LINE L1 5943 6566 0 8 934 992 49 0 40 chrX 45827352 45827501 -120822795 + L1Md_F2 LINE L1 6440 6582 0 8 934 1241 48 0 0 chrX 45827505 45827652 -120822644 + B1_Mm SINE Alu 1 147 0 8 934 224 232 0 0 chrX 45827652 45827708 -120822588 + A-rich Low_complexity Low_complexity 1 56 0 8 934 747 263 57 0 chrX 45827765 45827940 -120822356 + B3 SINE B2 27 211 -5 8 934 997 238 89 15 chrX 45829005 45829274 -120821022 - B4 SINE B4 -1 291 3 8 934 1427 80 5 0 chrX 45829431 45829618 -120820678 - B2_Mm1t SINE B2 -4 189 2 8 934 532 237 221 6 chrX 45829726 45829941 -120820355 + MTD LTR MaLR 161 421 0 8 934 273 207 11 99 chrX 45829945 45830036 -120820260 - MER3 DNA MER1_type -8 201 119 8 934 340 140 0 0 chrX 45830030 45830080 -120820216 - ID_B1 SINE B4 0 224 175 8 934 194 0 39 0 chrX 45830082 45830108 -120820188 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 934 1114 72 0 0 chrX 45830108 45830246 -120820050 - B1_Mus2 SINE Alu -9 138 1 8 934 240 200 60 0 chrX 45831230 45831280 -120819016 - ID_B1 SINE B4 0 224 172 8 934 537 188 104 0 chrX 45831238 45831334 -120818962 - B1_Mur4 SINE Alu -43 107 2 8 934 225 242 75 45 chrX 45831334 45831376 -120818920 - ORR1B1-int LTR MaLR -854 655 610 8 934 475 320 65 45 chrX 45831517 45831671 -120818625 - RSINE1 SINE B4 -2 163 7 8 934 228 297 116 42 chrX 45832115 45832210 -120818086 - PB1 SINE Alu -3 124 23 8 934 1332 90 36 41 chrX 45832213 45832409 -120817887 + B2_Mm2 SINE B2 1 195 0 8 934 324 275 53 32 chrX 45832621 45832715 -120817581 - B3 SINE B2 0 216 121 8 934 588 223 52 30 chrX 45832777 45832911 -120817385 - B1_Mur1 SINE Alu -11 138 2 8 934 468 240 48 0 chrX 45833734 45833838 -120816458 - PB1D10 SINE Alu -7 110 2 8 934 307 337 163 18 chrX 45834224 45834562 -120815734 + L1ME4a LINE L1 5737 6123 -1 8 934 233 204 0 0 chrX 45835870 45835914 -120814382 + CT-rich Low_complexity Low_complexity 2 45 0 8 934 958 181 271 3 chrX 45837055 45837368 -120812928 + MTD LTR MaLR 12 408 -13 8 934 333 291 42 9 chrX 45837448 45837575 -120812721 - B1F SINE Alu -11 138 4 8 934 440 247 97 57 chrX 45838001 45838177 -120812119 + MER20 DNA MER1_type 1 183 -36 8 934 223 279 35 11 chrX 45838466 45838553 -120811743 - MIR SINE MIR -76 132 44 8 934 292 173 0 0 chrX 45839055 45839107 -120811189 - B1F SINE Alu -6 143 92 8 934 310 138 227 11 chrX 45839472 45839560 -120810736 - L1MB7 LINE L1 -41 6143 6037 8 934 1202 48 7 0 chrX 45839649 45839795 -120810501 + B1_Mm SINE Alu 1 147 0 8 934 236 189 0 0 chrX 45839797 45839850 -120810446 + A-rich Low_complexity Low_complexity 1 53 0 8 934 837 109 0 23 chrX 45839909 45840041 -120810255 - B1_Mur4 SINE Alu -20 130 2 8 934 700 236 14 0 chrX 45840567 45840707 -120809589 - B1_Mur1 SINE Alu -1 148 7 8 934 256 290 9 99 chrX 45840610 45840721 -120809575 - MT2B LTR ERVL -344 257 157 8 934 610 194 38 131 chrX 45840723 45840740 -120809556 - ID_B1 SINE B4 -50 242 214 8 934 1000 60 0 0 chrX 45840740 45840874 -120809422 - B1_Mm SINE Alu -1 146 13 8 934 610 194 38 131 chrX 45840874 45840981 -120809315 - ID_B1 SINE B4 -50 213 23 8 934 211 316 26 13 chrX 45840920 45840997 -120809299 - ID4 SINE ID -1 82 5 8 934 666 259 41 46 chrX 45841632 45841826 -120808470 + B4A SINE B4 94 286 -6 8 934 200 280 20 0 chrX 45841837 45841887 -120808409 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 934 237 304 14 14 chrX 45842182 45842252 -120808044 - ID4 SINE ID -4 79 10 8 934 1170 55 14 7 chrX 45842277 45842424 -120807872 - B1_Mur4 SINE Alu -1 149 2 8 934 986 223 22 48 chrX 45842701 45842932 -120807364 - B4 SINE B4 -19 273 49 8 934 672 299 122 15 chrX 45842981 45843243 -120807053 + B4A SINE B4 1 290 -2 8 934 659 248 7 14 chrX 45843447 45843594 -120806702 - B1_Mur1 SINE Alu 0 149 4 8 934 209 333 89 59 chrX 45843917 45844086 -120806210 + MIRb SINE MIR 43 216 -52 8 934 417 215 0 12 chrX 45844118 45844198 -120806098 + ID4_ SINE ID 3 81 -2 8 934 703 220 121 77 chrX 45844214 45844421 -120805875 + ID_B1 SINE B4 2 217 -7 8 934 1302 98 0 6 chrX 45844429 45844604 -120805692 + B2_Mm2 SINE B2 3 176 -19 8 934 184 361 0 46 chrX 45844659 45844746 -120805550 + L2 LINE L2 2672 2754 -665 8 934 852 171 21 0 chrX 45844759 45844899 -120805397 + B1_Mur4 SINE Alu 1 143 -7 8 934 1349 84 17 6 chrX 45844910 45845090 -120805206 + B2_Mm2 SINE B2 2 183 -12 8 934 517 232 311 0 chrX 45845090 45845245 -120805051 - B3 SINE B2 -9 207 2 8 934 694 115 0 0 chrX 45845489 45845593 -120804703 + B1_Mur3 SINE Alu 37 140 -9 8 934 233 266 49 25 chrX 45845665 45845746 -120804550 - ID4 SINE ID 0 83 1 8 934 382 250 21 21 chrX 45845925 45846019 -120804277 + B4 SINE B4 2 95 -197 8 934 739 116 0 55 chrX 45846021 45846167 -120804129 + L1Md_F3 LINE L1 6447 6584 0 8 934 474 33 0 0 chrX 45846176 45846236 -120804060 + (GA)n Simple_repeat Simple_repeat 1 60 0 8 934 799 109 0 42 chrX 45846248 45846392 -120803904 + L1Md_F3 LINE L1 6447 6584 0 8 934 270 73 0 0 chrX 45846401 45846442 -120803854 + (GA)n Simple_repeat Simple_repeat 1 41 0 8 934 553 219 80 94 chrX 45846442 45846654 -120803642 + B4A SINE B4 83 291 -1 8 934 619 259 19 12 chrX 45846665 45846789 -120803507 + B3A SINE B2 32 157 -41 8 934 297 75 0 0 chrX 45846789 45846829 -120803467 + (CATA)n Simple_repeat Simple_repeat 4 43 0 8 934 619 259 19 12 chrX 45846829 45846864 -120803432 + B3A SINE B2 158 192 -6 8 934 1096 65 0 0 chrX 45847446 45847585 -120802711 + B1_Mus2 SINE Alu 1 139 -8 8 934 198 0 0 0 chrX 45847585 45847607 -120802689 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 8 934 370 273 165 23 chrX 45848179 45848355 -120801941 + MER20 DNA MER1_type 1 201 -18 8 934 244 309 84 11 chrX 45848525 45848620 -120801676 + PB1 SINE Alu 6 107 -20 8 934 25 75 0 0 chrX 45848624 45848677 -120801619 + AT_rich Low_complexity Low_complexity 1 53 0 8 934 647 250 15 30 chrX 45848758 45848952 -120801344 - B3 SINE B2 -8 187 4 8 934 274 195 81 14 chrX 45849095 45849200 -120801096 - B1F SINE Alu 0 120 1 8 934 1094 289 24 24 chrX 45849316 45849584 -120800712 + B4 SINE B4 2 270 -22 8 934 306 0 0 0 chrX 45849584 45849618 -120800678 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 934 1094 289 24 24 chrX 45849618 45849640 -120800656 + B4 SINE B4 271 292 0 8 934 1413 67 39 0 chrX 45850799 45850979 -120799317 + B2_Mm2 SINE B2 2 188 -7 8 934 294 223 152 0 chrX 45850981 45851073 -120799223 + ID4 SINE ID 12 117 -35 8 934 265 244 305 0 chrX 45851240 45851322 -120798974 - PB1D7 SINE Alu -10 110 4 8 934 349 77 0 15 chrX 45851379 45851445 -120798851 - B2_Mm1a SINE B2 -2 191 127 8 934 1164 110 46 0 chrX 45851508 45851681 -120798615 - B2_Mm2 SINE B2 -14 181 1 8 934 3260 170 53 5 chrX 45852049 45852652 -120797644 + Lx2B LINE L1 6327 6958 -42 8 934 222 37 0 0 chrX 45852663 45852690 -120797606 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 934 393 228 0 0 chrX 45853190 45853269 -120797027 - ID4_ SINE ID -3 80 2 8 934 236 276 71 99 chrX 45853906 45854047 -120796249 + MT2B LTR ERVL 152 288 -313 9 934 638 176 33 8 chrX 45853932 45854052 -120796244 + B1_Mur1 SINE Alu 19 141 -8 9 934 528 174 25 9 chrX 45854087 45854211 -120796085 + B1_Mus1 SINE Alu 10 139 -10 9 934 558 79 0 0 chrX 45854240 45854316 -120795980 + (GA)n Simple_repeat Simple_repeat 2 77 0 9 934 268 278 27 14 chrX 45854328 45854401 -120795895 + PB1D9 SINE Alu 18 91 -29 9 934 791 142 7 0 chrX 45854419 45854560 -120795736 - B1_Mur4 SINE Alu -7 143 2 9 934 607 211 33 5 chrX 45854786 45854950 -120795346 - B3 SINE B2 -19 174 1 9 934 369 283 116 35 chrX 45855243 45855415 -120794881 + MLT1B LTR MaLR 205 390 0 9 934 333 260 93 68 chrX 45855444 45855605 -120794691 - RSINE1 SINE B4 0 165 1 9 934 23 0 0 0 chrX 45856066 45856089 -120794207 + AT_rich Low_complexity Low_complexity 1 23 0 9 934 882 236 51 51 chrX 45858544 45858799 -120791497 - MER2 DNA MER2_type 0 345 91 9 934 383 202 45 0 chrX 45858809 45858898 -120791398 - PB1D9 SINE Alu -6 114 22 9 934 281 216 0 0 chrX 45858889 45858940 -120791356 - MER2 DNA MER2_type -288 57 7 9 934 408 295 159 5 chrX 45859430 45859620 -120790676 - MER58B DNA MER1_type -42 299 79 9 934 468 278 19 0 chrX 45859620 45859728 -120790568 + PB1D7 SINE Alu 3 112 -8 9 934 229 297 60 45 chrX 45859786 45859920 -120790376 + B1F SINE Alu 5 140 -9 9 934 639 194 6 24 chrX 45860014 45860183 -120790113 + CT-rich Low_complexity Low_complexity 2 167 0 9 934 261 0 0 0 chrX 45860243 45860272 -120790024 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 9 934 1149 57 0 0 chrX 45860272 45860429 -120789867 - B2_Mm1t SINE B2 -35 158 2 9 934 246 358 16 31 chrX 45860481 45860608 -120789688 - MER5A DNA MER1_type -2 187 63 9 934 1622 42 5 0 chrX 45860643 45860835 -120789461 - B2_Mm1a SINE B2 0 193 1 9 934 246 128 0 0 chrX 45860864 45860903 -120789393 + (TG)n Simple_repeat Simple_repeat 1 39 0 9 934 297 0 0 0 chrX 45860957 45860990 -120789306 + (GA)n Simple_repeat Simple_repeat 2 34 0 9 934 502 281 0 15 chrX 45861210 45861340 -120788956 + B1_Mur1 SINE Alu 2 129 -20 9 934 266 270 66 22 chrX 45861335 45861426 -120788870 + B1F SINE Alu 42 136 -13 9 934 238 361 0 14 chrX 45861437 45861510 -120788786 + ID4_ SINE ID 1 72 -11 9 934 901 220 55 5 chrX 45861806 45862007 -120788289 + B3 SINE B2 1 211 -5 9 934 1252 74 22 38 chrX 45862258 45862416 -120787880 + B2_Mm1a SINE B2 2 160 -33 9 934 195 42 0 0 chrX 45862416 45862440 -120787856 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 9 934 1252 74 22 38 chrX 45862440 45862464 -120787832 + B2_Mm1a SINE B2 161 181 -12 9 934 401 241 194 0 chrX 45862860 45862968 -120787328 - B1_Mur1 SINE Alu -19 130 2 9 934 335 238 12 12 chrX 45863042 45863123 -120787173 - PB1D10 SINE Alu -4 113 33 9 934 523 225 93 0 chrX 45863148 45863277 -120787019 - B1F SINE Alu 0 149 9 9 934 1131 58 14 0 chrX 45863467 45863606 -120786690 + B1_Mus1 SINE Alu 1 141 -7 9 934 249 159 0 0 chrX 45863610 45863673 -120786623 + A-rich Low_complexity Low_complexity 1 63 0 9 934 339 305 29 0 chrX 45863686 45863791 -120786505 + B1F SINE Alu 33 140 -9 9 934 580 200 80 0 chrX 45863889 45864014 -120786282 + B1_Mur2 SINE Alu 10 144 -5 9 934 626 239 29 0 chrX 45865075 45865213 -120785083 - B1_Mur1 SINE Alu -6 143 2 9 934 451 286 104 2 chrX 45865606 45865786 -120784510 + MIR3 SINE MIR 4 197 -11 9 934 180 97 0 0 chrX 45866997 45867028 -120783268 + (T)n Simple_repeat Simple_repeat 1 31 0 9 934 200 128 26 0 chrX 45867194 45867233 -120783063 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 9 934 198 71 0 0 chrX 45867550 45867578 -120782718 + (CAGAGA)n Simple_repeat Simple_repeat 1 28 0 9 934 208 135 27 0 chrX 45867896 45867933 -120782363 + MIRm SINE MIR 46 83 -193 9 934 1020 74 22 0 chrX 45867997 45868132 -120782164 + B1_Mus2 SINE Alu 1 138 -9 9 934 215 0 0 62 chrX 45868132 45868164 -120782132 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 9 934 212 351 14 0 chrX 45868254 45868328 -120781968 + ID4_ SINE ID 3 77 -6 9 934 465 284 9 55 chrX 45868634 45868807 -120781489 + ID_B1 SINE B4 77 245 -47 9 934 477 122 0 0 chrX 45868808 45868882 -120781414 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 9 934 685 177 0 0 chrX 45868899 45869012 -120781284 + PB1D9 SINE Alu 1 113 -7 9 934 2179 38 4 8 chrX 45869033 45869301 -120780995 + L1Md_F2 LINE L1 6309 6575 -7 9 934 554 225 208 0 chrX 45869347 45869520 -120780776 - B3 SINE B2 -6 210 2 9 934 986 120 0 51 chrX 45869531 45869689 -120780607 - B1_Mur4 SINE Alu 0 150 1 9 934 29 0 0 0 chrX 45869751 45869780 -120780516 + AT_rich Low_complexity Low_complexity 1 29 0 9 934 225 0 0 0 chrX 45869896 45869921 -120780375 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 934 1119 89 20 122 chrX 45869921 45870125 -120780171 - B2_Mm1t SINE B2 -10 183 1 9 934 1139 101 0 0 chrX 45870135 45870283 -120780013 - B1_Mus1 SINE Alu 0 148 1 9 934 457 100 233 0 chrX 45870492 45870582 -120779714 + RMER6A LTR ERVK 1 111 -579 9 934 664 103 0 130 chrX 45870566 45870689 -120779607 + MT2B LTR ERVL 181 287 -314 9 934 1985 131 36 10 chrX 45870689 45871047 -120779249 + RMER6A LTR ERVK 418 756 0 9 934 228 67 0 0 chrX 45872657 45872687 -120777609 + (CA)n Simple_repeat Simple_repeat 1 30 0 9 935 22 0 0 0 chrX 45875670 45875692 -120774604 + AT_rich Low_complexity Low_complexity 1 22 0 9 935 351 263 155 74 chrX 45875698 45875846 -120774450 - RSINE1 SINE B4 0 165 6 9 935 300 275 47 4 chrX 45875848 45876000 -120774296 - MIR SINE MIR -96 166 3 9 935 266 246 0 0 chrX 45876127 45876188 -120774108 + ID4_ SINE ID 2 62 -21 9 935 305 220 44 54 chrX 45876301 45876431 -120773865 - MIR3 SINE MIR -3 205 82 9 935 197 224 17 0 chrX 45877079 45877137 -120773159 + CT-rich Low_complexity Low_complexity 4 62 0 9 935 233 270 150 16 chrX 45877701 45877834 -120772462 - MIRc SINE MIR 0 268 118 9 935 310 170 0 0 chrX 45878069 45878122 -120772174 - B1_Mus1 SINE Alu -94 54 2 9 935 906 77 0 169 chrX 45878182 45878354 -120771942 + B1_Mus1 SINE Alu 2 144 -4 9 935 237 253 47 71 chrX 45878372 45878457 -120771839 + MER2 DNA MER2_type 239 321 -24 9 935 25 0 0 0 chrX 45879445 45879470 -120770826 + AT_rich Low_complexity Low_complexity 1 25 0 9 935 853 216 13 49 chrX 45879801 45880025 -120770271 + B3 SINE B2 1 216 0 9 935 248 256 0 23 chrX 45880035 45880052 -120770244 + ORR1B1-int LTR MaLR 631 644 -865 9 935 894 134 0 14 chrX 45880052 45880196 -120770100 + B1_Mus1 SINE Alu 1 142 -6 9 935 224 159 23 0 chrX 45880695 45880739 -120769557 + (TTTG)n Simple_repeat Simple_repeat 4 48 0 9 935 1293 27 0 0 chrX 45880739 45880886 -120769410 - B1_Mus2 SINE Alu 0 147 1 9 935 395 268 31 10 chrX 45881182 45881280 -120769016 + B1F SINE Alu 4 103 -46 9 935 267 31 0 0 chrX 45881281 45881313 -120768983 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 9 935 276 215 57 102 chrX 45881341 45881363 -120768933 - B1F SINE Alu 0 149 106 9 935 284 146 0 0 chrX 45881363 45881411 -120768885 - ID_B1 SINE B4 -13 211 164 9 935 276 215 57 102 chrX 45881411 45881429 -120768867 - B1F SINE Alu 0 105 66 9 935 386 297 90 33 chrX 45881465 45881587 -120768709 + B1F SINE Alu 18 146 -3 9 935 396 224 16 91 chrX 45881781 45881910 -120768386 - PB1D7 SINE Alu -21 128 15 9 935 396 0 0 0 chrX 45881927 45881971 -120768325 + (TG)n Simple_repeat Simple_repeat 1 44 0 9 935 330 285 45 19 chrX 45882025 45882179 -120768117 - L1M5 LINE L1 -407 5717 5560 9 935 903 228 29 29 chrX 45882216 45882424 -120767872 - B3 SINE B2 -7 209 2 9 935 708 140 92 42 chrX 45882624 45882766 -120767530 - B1_Mur4 SINE Alu -1 149 1 9 935 347 222 0 12 chrX 45883447 45883529 -120766767 - ID2 SINE ID 0 83 3 9 935 231 88 0 0 chrX 45883559 45883593 -120766703 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 9 935 799 105 0 8 chrX 45883609 45883734 -120766562 - B1_Mus1 SINE Alu -13 135 12 9 935 1671 47 0 0 chrX 45883880 45884073 -120766223 - B2_Mm1a SINE B2 0 193 1 9 935 812 226 105 0 chrX 45884246 45884436 -120765860 + B3 SINE B2 1 210 -6 9 935 742 181 87 0 chrX 45884458 45884596 -120765700 + B1_Mur4 SINE Alu 1 150 0 9 935 441 0 0 0 chrX 45884719 45884768 -120765528 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 9 935 533 237 98 8 chrX 45884785 45884917 -120765379 - RSINE1 SINE B4 -19 146 3 9 935 242 296 163 0 chrX 45885107 45885242 -120765054 - MER5A DNA MER1_type -1 188 32 9 935 593 209 97 0 chrX 45886195 45886329 -120763967 + B1_Mus1 SINE Alu 2 148 0 9 935 219 152 0 0 chrX 45886331 45886377 -120763919 + A-rich Low_complexity Low_complexity 3 48 0 9 935 275 92 136 15 chrX 45886738 45886804 -120763492 - B2_Mm1a SINE B2 -4 189 116 9 935 235 371 32 21 chrX 45886798 45886988 -120763308 - MER34A LTR ERV1 -254 317 126 9 935 385 274 63 24 chrX 45887165 45887292 -120763004 - B1F SINE Alu -7 142 11 9 935 297 171 12 146 chrX 45887300 45887382 -120762914 + ID4 SINE ID 6 76 -7 9 935 246 164 20 202 chrX 45887382 45887399 -120762897 + B4 SINE B4 6 86 -206 9 935 640 148 22 45 chrX 45887708 45887842 -120762454 - B1_Mur1 SINE Alu -10 139 9 9 935 293 220 0 167 chrX 45887738 45887858 -120762438 - MT2B LTR ERVL -341 260 161 1 935 302 193 48 0 chrX 45887881 45887964 -120762332 + Lx5 LINE L1 6959 7045 -5 1 935 393 320 122 7 chrX 45888106 45888254 -120762042 + RSINE1 SINE B4 1 165 0 1 935 21 36 0 0 chrX 45888263 45888291 -120762005 + AT_rich Low_complexity Low_complexity 1 28 0 1 935 1123 111 36 62 chrX 45888477 45888670 -120761626 + B2_Mm2 SINE B2 1 188 -7 1 935 299 311 78 0 chrX 45888728 45888818 -120761478 - PB1D10 SINE Alu -8 109 13 1 935 282 241 0 0 chrX 45888849 45888907 -120761389 + B1F1 SINE Alu 3 60 -89 1 935 944 116 14 7 chrX 45888920 45889068 -120761228 + B1_Mur4 SINE Alu 1 149 -1 1 935 296 282 26 0 chrX 45889162 45889240 -120761056 + ID4_ SINE ID 3 82 -1 1 935 383 262 0 0 chrX 45889307 45889387 -120760909 + B1_Mur1 SINE Alu 59 138 -11 1 935 203 163 0 44 chrX 45889402 45889447 -120760849 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 935 1126 58 0 0 chrX 45889508 45889646 -120760650 + B1_Mus1 SINE Alu 2 139 -9 1 935 342 0 0 0 chrX 45889646 45889684 -120760612 + (CTAA)n Simple_repeat Simple_repeat 3 40 0 1 935 200 213 16 32 chrX 45889829 45889892 -120760404 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 935 1426 57 0 49 chrX 45890083 45890167 -120760129 + B2_Mm1t SINE B2 1 84 -109 1 935 3227 62 57 34 chrX 45890167 45890638 -120759658 + RLTR45 LTR ERVK 1 482 0 1 935 1426 57 0 49 chrX 45890638 45890756 -120759540 + B2_Mm1t SINE B2 85 193 0 1 935 1041 89 0 0 chrX 45890768 45890903 -120759393 + B1_Mus1 SINE Alu 3 137 -11 1 935 951 9 0 0 chrX 45890905 45891013 -120759283 + (GAAA)n Simple_repeat Simple_repeat 1 108 0 1 935 567 300 48 32 chrX 45891079 45891265 -120759031 + B3 SINE B2 3 191 -25 1 935 207 0 0 0 chrX 45891265 45891288 -120759008 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 935 604 299 96 42 chrX 45891409 45891945 -120758351 - L1MA4 LINE L1 -402 5898 5333 1 935 372 383 16 0 chrX 45891960 45892088 -120758208 - RSINE1 SINE B4 -31 134 5 1 935 597 236 94 73 chrX 45892127 45892319 -120757977 - Lx2B LINE L1 -86 6914 6719 1 935 387 208 122 20 chrX 45892319 45892417 -120757879 - B3 SINE B2 -4 212 105 1 935 372 224 89 45 chrX 45892501 45892613 -120757683 - PB1D9 SINE Alu -1 119 3 1 935 280 280 47 31 chrX 45892769 45892898 -120757398 - L1MA4 LINE L1 -658 5189 5059 1 935 224 337 39 20 chrX 45892971 45893099 -120757197 + L2a LINE L2 3253 3382 -5 1 935 797 148 0 0 chrX 45893179 45893301 -120756995 - B1_Mus2 SINE Alu -7 140 19 1 935 1300 90 11 0 chrX 45893682 45893859 -120756437 + B2_Mm1t SINE B2 1 179 -14 1 935 817 147 8 0 chrX 45894285 45894414 -120755882 + B1_Mur3 SINE Alu 3 132 -17 1 935 909 187 149 5 chrX 45894438 45894626 -120755670 - B3 SINE B2 0 216 2 1 935 26 30 0 0 chrX 45894806 45894839 -120755457 + AT_rich Low_complexity Low_complexity 1 33 0 1 935 702 250 7 20 chrX 45895199 45895350 -120754946 + B1_Mur2 SINE Alu 1 149 0 1 935 210 167 0 0 chrX 45895356 45895392 -120754904 + A-rich Low_complexity Low_complexity 1 36 0 1 935 1210 64 92 6 chrX 45897286 45897460 -120752836 + B2_Mm2 SINE B2 1 189 -6 1 935 211 369 123 0 chrX 45897567 45897632 -120752664 - L2b LINE L2 -52 3323 3251 1 935 21 36 0 0 chrX 45897672 45897700 -120752596 + AT_rich Low_complexity Low_complexity 1 28 0 1 935 551 165 43 17 chrX 45897742 45897859 -120752437 - PB1D9 SINE Alu 0 120 1 1 935 25 0 0 0 chrX 45898101 45898126 -120752170 + AT_rich Low_complexity Low_complexity 1 25 0 1 935 25 0 0 0 chrX 45898364 45898389 -120751907 + AT_rich Low_complexity Low_complexity 1 25 0 1 935 300 53 0 0 chrX 45898403 45898441 -120751855 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 1 935 1369 181 8 4 chrX 45898460 45898718 -120751578 - Lx5 LINE L1 -134 6916 6673 1 935 740 125 75 2 chrX 45898747 45898882 -120751414 - B3 SINE B2 -62 133 1 1 935 555 268 101 25 chrX 45898889 45899088 -120751208 - B3 SINE B2 0 216 3 1 935 1057 88 0 0 chrX 45899379 45899516 -120750780 - B1_Mus2 SINE Alu -6 141 5 1 935 804 188 0 34 chrX 45899649 45899798 -120750498 - B1_Mur1 SINE Alu -5 144 1 1 935 780 220 30 55 chrX 45899884 45900086 -120750210 + B3 SINE B2 1 197 -19 1 935 917 255 33 19 chrX 45900965 45901177 -120749119 + B3 SINE B2 1 215 -1 1 935 21 57 0 0 chrX 45901217 45901252 -120749044 + AT_rich Low_complexity Low_complexity 1 35 0 1 935 544 308 37 37 chrX 45901417 45901564 -120748732 - ID_B1 SINE B4 -7 217 73 1 935 591 15 0 0 chrX 45901564 45901632 -120748664 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 935 544 308 37 37 chrX 45901632 45901700 -120748596 - ID SINE ID -152 72 3 1 935 43 76 0 0 chrX 45901885 45901977 -120748319 + AT_rich Low_complexity Low_complexity 1 92 0 1 935 22 56 0 0 chrX 45902092 45902128 -120748168 + AT_rich Low_complexity Low_complexity 1 36 0 1 935 1826 275 28 24 chrX 45902163 45902861 -120747435 + Lx6 LINE L1 6464 7384 -76 1 935 682 296 39 10 chrX 45903658 45903866 -120746430 - B4A SINE B4 -77 215 2 1 935 456 246 148 38 chrX 45903866 45904103 -120746193 + L1MB7 LINE L1 4830 5092 -1054 1 935 645 200 34 17 chrX 45904133 45904250 -120746046 - B1_Mur2 SINE Alu -27 122 4 1 935 749 264 129 2 chrX 45904330 45904648 -120745648 + L1MB7 LINE L1 5592 5943 -241 1 935 918 96 22 0 chrX 45904648 45904783 -120745513 + B2_Mm1t SINE B2 15 152 -41 1 935 445 17 0 0 chrX 45904808 45904866 -120745430 + B2_Mm1a SINE B2 127 184 -9 1 935 503 258 84 26 chrX 45904874 45905101 -120745195 + L1MB7 LINE L1 5936 6175 -9 1 935 272 296 11 138 chrX 45905281 45905375 -120744921 - RSINE1 SINE B4 -69 96 15 1 935 1022 100 0 0 chrX 45906286 45906426 -120743870 + B1_Mus1 SINE Alu 2 141 -7 1 935 888 10 0 0 chrX 45906427 45906528 -120743768 + (GAA)n Simple_repeat Simple_repeat 2 102 0 1 935 667 270 32 75 chrX 45906533 45906721 -120743575 + B3A SINE B2 3 182 -16 1 935 360 0 0 0 chrX 45906812 45906852 -120743444 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 935 410 288 83 0 chrX 45906972 45907104 -120743192 - B1_Mur2 SINE Alu -5 144 2 1 935 33 25 0 0 chrX 45907289 45907329 -120742967 + AT_rich Low_complexity Low_complexity 1 40 0 1 935 221 234 0 135 chrX 45907330 45907404 -120742892 - PB1D9 SINE Alu -1 148 66 1 935 5959 106 15 3 chrX 45907404 45908379 -120741917 + Lx4A LINE L1 5051 6034 -1024 1 935 1552 52 0 5 chrX 45908379 45908572 -120741724 + B2_Mm1a SINE B2 1 192 -1 1 935 5959 144 92 13 chrX 45908572 45909473 -120740823 + Lx4A LINE L1 6035 7055 -3 1 935 1190 68 0 0 chrX 45909478 45909626 -120740670 + B1_Mus1 SINE Alu 1 148 0 1 935 180 111 0 0 chrX 45909628 45909655 -120740641 + (GAA)n Simple_repeat Simple_repeat 2 28 0 1 935 1180 48 7 0 chrX 45909954 45910100 -120740196 + B1_Mm SINE Alu 1 147 0 1 935 237 65 0 0 chrX 45910100 45910131 -120740165 + (A)n Simple_repeat Simple_repeat 1 31 0 1 935 746 200 29 0 chrX 45910191 45910331 -120739965 + B1_Mur1 SINE Alu 5 148 -1 1 935 182 105 0 26 chrX 45910351 45910390 -120739906 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 1 935 234 0 0 0 chrX 45910535 45910561 -120739735 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 935 457 119 0 0 chrX 45910562 45910629 -120739667 + B1_Mus2 SINE Alu 77 143 -4 1 935 308 43 0 21 chrX 45910630 45910677 -120739619 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 1 935 195 42 0 0 chrX 45911002 45911026 -120739270 + (CAA)n Simple_repeat Simple_repeat 3 26 0 1 935 1341 99 11 0 chrX 45912543 45912734 -120737562 - B2_Mm1t SINE B2 0 193 1 1 935 294 238 11 57 chrX 45913338 45913431 -120736865 + MTEb LTR MaLR 287 374 -5 1 935 253 245 0 0 chrX 45913639 45913692 -120736604 + PB1D7 SINE Alu 6 58 -62 1 935 527 275 17 0 chrX 45913859 45913979 -120736317 - ID_B1 SINE B4 -1 223 102 1 935 332 312 14 35 chrX 45913861 45914004 -120736292 + YREP_Mm Unknown Unknown 181 320 -1492 1 935 323 232 104 10 chrX 45914048 45914144 -120736152 - PB1D10 SINE Alu -4 113 9 1 935 2057 167 32 22 chrX 45914340 45914744 -120735552 + MTC LTR MaLR 14 421 0 1 935 288 259 36 27 chrX 45914841 45914952 -120735344 + L1ME2z LINE L1 6332 6443 -1 1 935 747 267 119 61 chrX 45914991 45915334 -120734962 + Lx8 LINE L1 7111 7473 0 1 935 1190 48 7 0 chrX 45915470 45915615 -120734681 - B1_Mus2 SINE Alu 0 147 2 1 935 683 207 0 49 chrX 45915692 45915834 -120734462 + B1_Mur2 SINE Alu 5 139 -10 1 935 663 218 0 72 chrX 45915849 45916002 -120734294 + B1_Mur2 SINE Alu 1 142 -7 1 935 814 151 7 28 chrX 45916011 45916154 -120734142 + B1_Mur4 SINE Alu 11 150 0 1 935 449 271 105 0 chrX 45916407 45916540 -120733756 + B1_Mur2 SINE Alu 1 147 -2 1 935 1176 62 0 0 chrX 45917370 45917516 -120732780 + B1_Mus2 SINE Alu 1 146 -1 1 935 933 152 50 17 chrX 45917564 45917744 -120732552 - B2_Mm2 SINE B2 -8 187 2 1 935 988 85 0 0 chrX 45917901 45918030 -120732266 - B1_Mus1 SINE Alu -18 130 2 1 935 706 208 169 5 chrX 45918254 45918438 -120731858 + B3 SINE B2 3 216 0 1 935 1758 198 141 4 chrX 45918785 45919252 -120731044 + MT2A LTR ERVL 1 531 -2 1 935 252 247 44 11 chrX 45919451 45919541 -120730755 + L1M5 LINE L1 5309 5401 -767 1 935 269 297 0 0 chrX 45919611 45919675 -120730621 + B4A SINE B4 4 67 -225 1 935 22 0 0 0 chrX 45919744 45919766 -120730530 + AT_rich Low_complexity Low_complexity 1 22 0 1 935 1162 62 0 0 chrX 45920709 45920855 -120729441 - B1_Mm SINE Alu 0 147 2 1 935 6007 24 4 1 chrX 45921160 45921865 -120728431 - L1Md_F3 LINE L1 -19 6565 5859 1 935 634 319 6 0 chrX 45921921 45922081 -120728215 - RSINE1 SINE B4 0 165 5 1 935 394 250 120 0 chrX 45922134 45922226 -120728070 - RSINE1 SINE B4 -61 104 2 1 935 311 305 38 8 chrX 45922653 45922785 -120727511 + L1M5 LINE L1 5554 5689 -435 1 935 401 190 0 25 chrX 45922793 45922874 -120727422 + B3 SINE B2 88 166 -50 1 935 599 286 0 0 chrX 45922875 45923001 -120727295 - B1_Mur1 SINE Alu -20 129 4 1 935 741 170 29 7 chrX 45923108 45923244 -120727052 + B1_Mur2 SINE Alu 1 139 -10 1 935 1364 80 21 0 chrX 45923478 45923665 -120726631 + B2_Mm2 SINE B2 1 191 -4 1 935 548 210 0 61 chrX 45923687 45923819 -120726477 + B1_Mur3 SINE Alu 21 144 -5 1 935 694 245 32 93 chrX 45923902 45924118 -120726178 + B3 SINE B2 8 210 -6 1 935 395 311 45 25 chrX 45924118 45924278 -120726018 + MIRb SINE MIR 107 262 0 1 935 451 228 87 14 chrX 45924332 45924470 -120725826 - B1F SINE Alu -1 148 1 1 935 1395 202 69 24 chrX 45924584 45924919 -120725377 - L1_Rod LINE L1 -700 5147 4798 1 935 851 179 21 0 chrX 45925149 45925294 -120725002 + B1_Mur2 SINE Alu 1 148 -1 1 935 712 237 82 39 chrX 45925677 45925883 -120724413 + B3 SINE B2 1 215 -1 1 935 2067 203 26 22 chrX 45926541 45926958 -120723338 - MTD LTR MaLR 0 419 1 1 935 742 109 365 12 chrX 45927082 45927249 -120723047 + URR1A DNA MER1_type 1 226 0 1 935 324 233 0 0 chrX 45927330 45927390 -120722906 - PB1D10 SINE Alu -6 111 52 1 935 503 211 94 24 chrX 45927546 45927716 -120722580 - Lx9 LINE L1 0 7644 7463 1 935 579 138 136 9 chrX 45927717 45927827 -120722469 + MTC LTR MaLR 1 124 -297 1 935 3872 145 84 49 chrX 45927868 45928758 -120721538 + L1_Mur3 LINE L1 1245 2165 -3715 1 935 4677 167 43 53 chrX 45929070 45930186 -120720110 + L1_Mur3 LINE L1 2136 3222 -2658 1 935 180 0 0 0 chrX 45930186 45930206 -120720090 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 935 2971 236 43 136 chrX 45930206 45930434 -120719862 + L1_Mur3 LINE L1 3217 3335 -2542 1 935 1378 69 16 16 chrX 45930434 45930626 -120719670 + B2_Mm2 SINE B2 3 194 -1 1 935 2971 236 43 136 chrX 45930626 45930754 -120719542 + L1_Mur3 LINE L1 3336 3473 -2404 1 935 2029 161 17 67 chrX 45930759 45931165 -120719131 - ORR1B1 LTR MaLR -8 386 1 1 935 534 306 89 42 chrX 45931187 45931446 -120718850 - B4A SINE B4 -20 272 2 1 935 965 224 14 14 chrX 45932059 45932272 -120718024 - B3 SINE B2 -3 213 1 1 935 1157 48 0 14 chrX 45932671 45932819 -120717477 + B1_Mus2 SINE Alu 2 147 0 1 935 183 42 0 0 chrX 45932830 45932854 -120717442 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 935 582 261 12 69 chrX 45932936 45933109 -120717187 + RSINE1 SINE B4 3 165 0 1 935 21 0 0 0 chrX 45933119 45933140 -120717156 + AT_rich Low_complexity Low_complexity 1 21 0 1 935 318 26 0 0 chrX 45933231 45933270 -120717026 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 935 557 307 0 7 chrX 45933291 45933432 -120716864 - B1F1 SINE Alu -5 144 5 1 935 331 288 0 0 chrX 45933505 45933578 -120716718 + ID SINE ID 2 74 -150 1 935 213 39 0 0 chrX 45933759 45933785 -120716511 + (CATA)n Simple_repeat Simple_repeat 2 27 0 1 935 692 208 20 26 chrX 45933802 45933955 -120716341 - Lx5 LINE L1 -51 6999 6848 1 935 373 203 27 0 chrX 45934158 45934231 -120716065 - B1_Mur1 SINE Alu -31 118 44 1 935 3293 141 58 2 chrX 45934231 45934785 -120715511 - RMER4B LTR ERVK 0 585 1 1 935 2274 159 87 34 chrX 45935275 45935711 -120714585 + RMER4A LTR ERVK 8 466 0 1 935 1354 117 0 0 chrX 45935781 45936003 -120714293 + L1_Mm LINE L1 1879 2100 -3783 1 935 374 308 79 30 chrX 45936090 45936254 -120714042 - Lx8 LINE L1 -250 7223 7052 1 935 5003 118 6 26 chrX 45936254 45937070 -120713226 + RLTR22_Mur LTR ERVK 1 800 -1048 1 935 1305 99 20 25 chrX 45937237 45937433 -120712863 - B2_Mm2 SINE B2 0 195 1 1 935 25 0 0 0 chrX 45937676 45937701 -120712595 + AT_rich Low_complexity Low_complexity 1 25 0 1 935 397 304 88 0 chrX 45937703 45937828 -120712468 + RSINE1 SINE B4 28 163 -2 1 935 300 301 24 0 chrX 45937882 45937965 -120712331 + B4 SINE B4 9 93 -199 1 935 768 219 122 5 chrX 45937969 45938157 -120712139 + B3 SINE B2 2 211 -5 1 935 290 254 39 102 chrX 45938176 45938303 -120711993 + B4 SINE B4 81 199 -93 1 935 274 289 0 0 chrX 45938319 45938395 -120711901 + RSINE1 SINE B4 2 77 -88 1 935 344 244 110 11 chrX 45938405 45938496 -120711800 - RSINE1 SINE B4 -54 111 12 1 935 1191 41 0 7 chrX 45938688 45938836 -120711460 + B1_Mus2 SINE Alu 1 147 0 1 935 1395 86 0 5 chrX 45939031 45939219 -120711077 - B2_Mm2 SINE B2 -7 188 2 1 935 859 251 0 27 chrX 45939247 45939468 -120710828 - B3 SINE B2 0 216 2 1 935 689 158 158 0 chrX 45939633 45939760 -120710536 + B1_Mur2 SINE Alu 2 148 -1 1 935 261 254 0 0 chrX 45939761 45939832 -120710464 + A-rich Low_complexity Low_complexity 1 71 0 1 935 495 0 0 0 chrX 45939835 45939890 -120710406 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 1 935 506 236 0 0 chrX 45939900 45940006 -120710290 + B3A SINE B2 2 107 -91 1 935 306 0 0 0 chrX 45940396 45940430 -120709866 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 935 353 58 19 0 chrX 45940665 45940717 -120709579 + (TTTTG)n Simple_repeat Simple_repeat 4 56 0 1 935 410 247 0 24 chrX 45940723 45940806 -120709490 - ID4 SINE ID -1 82 2 1 935 577 257 16 76 chrX 45941300 45941485 -120708811 - B4A SINE B4 -117 175 2 1 935 470 244 164 9 chrX 45941629 45941745 -120708551 + RSINE1 SINE B4 3 136 -29 1 935 384 77 0 0 chrX 45941752 45941804 -120708492 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 935 1092 83 14 0 chrX 45942184 45942329 -120707967 + B1_Mus2 SINE Alu 1 147 0 1 935 367 307 0 0 chrX 45942367 45942442 -120707854 + RSINE1 SINE B4 87 161 -4 1 935 228 122 0 0 chrX 45942451 45942492 -120707804 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 935 1122 68 0 20 chrX 45942656 45942805 -120707491 - B1_Mus2 SINE Alu -1 146 1 1 935 279 0 0 0 chrX 45942832 45942863 -120707433 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 935 909 282 84 12 chrX 45942878 45943129 -120707167 + B4 SINE B4 24 292 0 1 935 966 163 17 11 chrX 45943201 45943381 -120706915 + B2_Mm2 SINE B2 1 181 -14 1 935 1220 62 14 0 chrX 45943594 45943739 -120706557 + B1_Mus2 SINE Alu 1 147 0 1 935 313 344 31 11 chrX 45943891 45944019 -120706277 + B1F SINE Alu 16 147 -2 1 935 240 324 15 0 chrX 45944019 45944087 -120706209 + ID2 SINE ID 2 70 -13 1 935 739 284 14 0 chrX 45944140 45944288 -120706008 + RSINE1 SINE B4 8 157 -8 1 935 487 287 51 14 chrX 45944410 45944548 -120705748 - B1F2 SINE Alu -1 148 6 1 935 432 0 0 0 chrX 45944761 45944809 -120705487 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 935 409 259 35 0 chrX 45944810 45944895 -120705401 - RSINE1 SINE B4 -41 124 37 1 935 816 158 61 66 chrX 45945319 45945515 -120704781 + B2_Mm2 SINE B2 1 195 0 1 935 1100 94 23 28 chrX 45945690 45945866 -120704430 + Lx3A LINE L1 6802 6976 -5 1 935 272 222 208 20 chrX 45945909 45945925 -120704371 + B1F1 SINE Alu 29 147 -1 1 935 337 202 143 0 chrX 45945925 45946009 -120704287 + ID_B1 SINE B4 129 224 0 1 935 391 320 8 16 chrX 45946026 45946153 -120704143 + RSINE1 SINE B4 2 127 -38 1 935 456 19 0 0 chrX 45946169 45946222 -120704074 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 935 366 42 0 0 chrX 45946224 45946272 -120704024 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 935 28 0 0 0 chrX 45946481 45946509 -120703787 + AT_rich Low_complexity Low_complexity 1 28 0 1 935 180 0 0 0 chrX 45947163 45947183 -120703113 + (G)n Simple_repeat Simple_repeat 1 20 0 1 935 209 240 13 0 chrX 45947569 45947644 -120702652 + GA-rich Low_complexity Low_complexity 2 77 0 1 935 1069 122 0 7 chrX 45948426 45948574 -120701722 - B1_Mus1 SINE Alu 0 148 2 1 935 799 136 16 4 chrX 45948666 45948809 -120701487 + B1_Mus2 SINE Alu 8 148 0 1 935 399 224 204 88 chrX 45948824 45948963 -120701333 + RSINE1 SINE B4 2 158 -7 1 935 270 0 0 0 chrX 45948963 45948993 -120701303 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 935 1830 16 0 0 chrX 45949106 45949298 -120700998 - B2_Mm1a SINE B2 0 193 2 1 935 1293 55 0 0 chrX 45949881 45950027 -120700269 + B1_Mus2 SINE Alu 2 147 0 1 935 374 148 0 27 chrX 45950027 45950138 -120700158 + A-rich Low_complexity Low_complexity 1 108 0 1 935 513 139 41 15 chrX 45950416 45950533 -120699763 - B1_Mus2 SINE Alu -73 74 2 1 935 490 305 38 5 chrX 45950705 45950916 -120699380 - L1M4 LINE L1 -905 5739 5522 1 935 345 233 14 14 chrX 45951107 45951181 -120699115 - ID_B1 SINE B4 -12 212 139 1 935 1028 196 49 41 chrX 45951201 45951446 -120698850 + Lx5 LINE L1 6801 7047 -3 1 935 243 325 29 92 chrX 45951468 45951548 -120698748 - L1M4 LINE L1 -1360 5021 4952 1 935 915 196 0 0 chrX 45951548 45951691 -120698605 - B1_Mur1 SINE Alu -5 144 2 1 935 656 271 31 31 chrX 45951691 45951961 -120698335 - L1M4 LINE L1 -1649 4989 4717 1 935 232 125 39 59 chrX 45952010 45952061 -120698235 - B2_Mm2 SINE B2 -145 50 1 1 935 300 224 0 76 chrX 45952233 45952325 -120697971 - L1M4 LINE L1 -5179 1363 1279 1 935 186 71 0 0 chrX 45952720 45952748 -120697548 + (T)n Simple_repeat Simple_repeat 1 28 0 1 935 1335 14 14 0 chrX 45952749 45952895 -120697401 - B1_Mur4 SINE Alu -1 149 2 1 935 1246 172 29 5 chrX 45953244 45953454 -120696842 - B3 SINE B2 0 216 2 1 935 410 0 20 0 chrX 45953455 45953505 -120696791 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 935 1125 56 7 0 chrX 45953505 45953649 -120696647 - B1_Mm SINE Alu -1 146 2 1 935 444 193 15 123 chrX 45953538 45953668 -120696628 - MT2B LTR ERVL -337 264 149 1 935 891 53 0 0 chrX 45953760 45953873 -120696423 - B2_Mm2 SINE B2 -82 113 1 1 935 267 220 0 0 chrX 45953880 45953930 -120696366 - B1_Mus2 SINE Alu -64 83 34 1 935 225 268 0 0 chrX 45954227 45954283 -120696013 - B3A SINE B2 -140 58 3 1 935 323 158 35 69 chrX 45954345 45954461 -120695835 - Lx9 LINE L1 -4 7640 7529 1 935 261 0 0 0 chrX 45954467 45954496 -120695800 + (TGG)n Simple_repeat Simple_repeat 1 29 0 1 935 3757 76 15 0 chrX 45954692 45955317 -120694979 - L1_Mus4 LINE L1 -587 6049 5399 1 935 1054 54 0 20 chrX 45955317 45955469 -120694827 + L1_Mus4 LINE L1 6487 6635 -1 1 935 288 0 0 0 chrX 45956034 45956066 -120694230 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 935 429 271 118 54 chrX 45956180 45956445 -120693851 - L1M4 LINE L1 -820 5326 5040 1 935 654 166 162 60 chrX 45956445 45956612 -120693684 - B2_Mm2 SINE B2 -10 185 2 1 935 429 271 118 54 chrX 45956612 45956678 -120693618 - L1M4 LINE L1 -1107 5039 4974 1 935 288 340 99 27 chrX 45956799 45957062 -120693234 + L1MB5 LINE L1 5880 6161 -13 1 935 180 0 0 0 chrX 45957437 45957457 -120692839 + (TTTTTG)n Simple_repeat Simple_repeat 5 24 0 1 935 2318 138 83 10 chrX 45958033 45958420 -120691876 - MTC LTR MaLR -6 415 1 1 935 665 272 94 12 chrX 45958449 45958712 -120691584 - Lx6 LINE L1 -6 7454 7213 1 935 759 78 0 0 chrX 45958931 45959034 -120691262 + (CA)n Simple_repeat Simple_repeat 2 104 0 1 935 396 55 0 0 chrX 45959035 45959090 -120691206 + (CAGA)n Simple_repeat Simple_repeat 2 56 0 1 935 1790 146 29 70 chrX 45960107 45960325 -120689971 + RMER17C LTR ERVK 1 206 -204 1 935 297 0 0 0 chrX 45960325 45960358 -120689938 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 935 1790 146 29 70 chrX 45960358 45960553 -120689743 + RMER17C LTR ERVK 207 397 -13 1 935 1263 68 0 0 chrX 45960580 45960728 -120689568 - B1_Mus1 SINE Alu 0 148 1 1 935 883 181 68 103 chrX 45960753 45960987 -120689309 + RMER17C-int LTR ERVK 1 226 -3012 1 935 1866 148 47 37 chrX 45960989 45961390 -120688906 + RMER17C LTR ERVK 1 405 -5 1 935 929 181 135 35 chrX 45961481 45961710 -120688586 + RMER17C-int LTR ERVK 408 659 -2579 1 935 543 16 0 0 chrX 45961799 45961863 -120688433 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 935 195 42 0 0 chrX 45962364 45962388 -120687908 + (CCA)n Simple_repeat Simple_repeat 2 25 0 1 935 10501 115 63 58 chrX 45962671 45964229 -120686067 + RMER17C-int LTR ERVK 1338 2871 -367 1 935 1251 72 0 0 chrX 45964229 45964396 -120685900 + (TA)n Simple_repeat Simple_repeat 1 167 0 1 935 312 27 0 0 chrX 45964396 45964432 -120685864 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 935 246 128 0 0 chrX 45964434 45964473 -120685823 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 935 10501 115 63 58 chrX 45964473 45964801 -120685495 + RMER17C-int LTR ERVK 2872 3235 -3 1 935 1731 166 10 175 chrX 45964801 45964901 -120685395 + RMER17C LTR ERVK 1 105 -305 1 935 1389 61 0 0 chrX 45964901 45965081 -120685215 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 935 1731 166 10 175 chrX 45965081 45965471 -120684825 + RMER17C LTR ERVK 106 409 -1 1 935 537 44 0 0 chrX 45965666 45965734 -120684562 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 935 7512 51 4 0 chrX 45965817 45966736 -120683560 + L1Md_F3 LINE L1 4664 5586 -297 1 935 9063 27 5 0 chrX 45966736 45967729 -120682567 + L1Md_F3 LINE L1 5587 6584 0 1 935 2469 139 11 0 chrX 45968915 45969297 -120680999 - ORR1B1 LTR MaLR -8 386 1 1 935 373 277 24 0 chrX 45969305 45969388 -120680908 + RSINE1 SINE B4 68 152 -13 1 935 22 56 0 0 chrX 45969482 45969518 -120680778 + AT_rich Low_complexity Low_complexity 1 36 0 1 935 5805 187 110 11 chrX 45969755 45970467 -120679829 + Lx6 LINE L1 5243 6018 -1442 1 935 1085 169 11 27 chrX 45970467 45970655 -120679641 - B2_Mm2 SINE B2 -9 186 2 1 935 5805 244 67 48 chrX 45970655 45972051 -120678245 + Lx6 LINE L1 6019 7442 -18 1 935 1042 257 54 126 chrX 45972573 45972978 -120677318 + MTE2a LTR MaLR 4 379 0 1 935 241 171 24 0 chrX 45972978 45973019 -120677277 + Lx8 LINE L1 6362 6403 -1070 1 935 723 252 100 25 chrX 45973045 45973202 -120677094 + Lx8 LINE L1 7181 7342 -131 1 935 2383 92 9 52 chrX 45973202 45973546 -120676750 + ORR1A4 LTR MaLR 1 329 0 1 935 723 252 100 25 chrX 45973546 45973628 -120676668 + Lx8 LINE L1 7343 7437 -36 1 935 330 26 0 0 chrX 45973628 45973667 -120676629 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 935 682 133 158 0 chrX 45973699 45973819 -120676477 - B1_Mus2 SINE Alu 0 147 9 1 935 358 282 32 16 chrX 45973860 45973986 -120676310 - MER5A1 DNA MER1_type -6 160 33 1 935 510 253 100 21 chrX 45974085 45974275 -120676021 + MER33 DNA MER1_type 1 205 -119 1 935 317 241 23 46 chrX 45974282 45974369 -120675927 + ID4 SINE ID 15 99 -53 1 935 629 227 155 28 chrX 45975230 45975411 -120674885 - B3 SINE B2 -12 204 1 1 935 213 318 145 15 chrX 45975482 45975613 -120674683 + MIR SINE MIR 21 168 -94 1 935 907 226 112 9 chrX 45976301 45976524 -120673772 - Lx6 LINE L1 -28 7432 7187 1 935 211 231 39 0 chrX 45977028 45977080 -120673216 + (CCGGG)n Simple_repeat Simple_repeat 1 54 0 1 935 1584 68 5 0 chrX 45978053 45978244 -120672052 - B2_Mm1t SINE B2 -1 192 1 1 935 523 256 26 0 chrX 45978509 45978626 -120671670 - PB1D9 SINE Alu 0 120 1 1 935 327 272 79 0 chrX 45979601 45979715 -120670581 + L3 LINE CR1 4102 4224 -265 1 935 1068 214 25 0 chrX 45980282 45980483 -120669813 + B3 SINE B2 1 206 -10 1 935 573 221 14 54 chrX 45980688 45980836 -120669460 - ID_B1 SINE B4 -4 220 79 1 935 390 252 90 29 chrX 45981268 45981414 -120668882 - MIR SINE MIR -79 189 24 1 935 249 333 107 10 chrX 45981595 45981698 -120668598 + MER5A DNA MER1_type 31 143 -46 1 935 524 212 17 16 chrX 45981704 45981822 -120668474 - ID_B1 SINE B4 -54 170 54 1 935 1128 116 0 0 chrX 45982990 45983137 -120667159 - B1_Mus1 SINE Alu 0 148 2 1 935 500 224 100 81 chrX 45983322 45983482 -120666814 + RSINE1 SINE B4 3 165 0 1 935 239 71 24 0 chrX 45983624 45983666 -120666630 + (CCCA)n Simple_repeat Simple_repeat 3 45 0 1 935 1779 21 0 0 chrX 45984418 45984607 -120665689 - B2_Mm1t SINE B2 -3 190 2 1 935 28 29 0 0 chrX 45984609 45984644 -120665652 + AT_rich Low_complexity Low_complexity 1 35 0 1 935 427 89 9 0 chrX 45984651 45984715 -120665581 - B2_Mm2 SINE B2 -102 114 47 1 935 1420 74 11 0 chrX 45984762 45984938 -120665358 - B2_Mm1t SINE B2 -14 179 2 1 935 645 240 48 74 chrX 45985676 45985775 -120664521 - L1MD LINE L1 -2350 3796 3697 1 935 1179 115 10 63 chrX 45985775 45985980 -120664316 - B2_Mm2 SINE B2 0 195 2 1 935 645 240 48 74 chrX 45985980 45986191 -120664105 - L1MD LINE L1 -2450 3696 3494 1 935 1195 77 0 0 chrX 45986201 45986344 -120663952 + B1_Mus1 SINE Alu 1 143 -5 1 935 243 0 0 0 chrX 45986348 45986375 -120663921 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 935 5890 56 12 4 chrX 45986395 45987165 -120663131 - RLTR13D2 LTR ERVK -247 776 1 1 935 230 333 0 0 chrX 45987170 45987230 -120663066 - ID4_ SINE ID -11 72 13 1 935 296 331 34 34 chrX 45987239 45987386 -120662910 - B1F1 SINE Alu -2 147 1 1 935 303 216 31 39 chrX 45987411 45987541 -120662755 - Lx9 LINE L1 0 7644 7516 1 935 545 272 122 31 chrX 45987526 45987814 -120662482 - L1MD LINE L1 -3160 2986 2673 1 935 238 204 0 0 chrX 45987873 45987927 -120662369 + T-rich Low_complexity Low_complexity 1 54 0 1 935 451 271 59 44 chrX 45988252 45988387 -120661909 + RSINE1 SINE B4 4 140 -25 1 935 731 171 123 8 chrX 45988438 45988568 -120661728 - B1_Mus1 SINE Alu -3 145 1 1 935 903 185 7 7 chrX 45988604 45988751 -120661545 - B1_Mur4 SINE Alu -1 149 3 1 935 1468 80 21 0 chrX 45988763 45988951 -120661345 - B2_Mm2 SINE B2 -3 192 1 1 935 1639 199 72 16 chrX 45989572 45989949 -120660347 + Lx9 LINE L1 7242 7639 -5 1 935 653 81 0 0 chrX 45989950 45990036 -120660260 - B1_Mus2 SINE Alu -5 142 57 1 935 1038 116 84 28 chrX 45990349 45990527 -120659769 - B2_Mm2 SINE B2 -6 189 2 1 935 321 317 70 41 chrX 45990724 45990895 -120659401 + MIRb SINE MIR 81 256 -12 1 935 249 374 65 8 chrX 45990989 45991113 -120659183 + Charlie2a DNA MER1_type 296 426 -2435 1 935 1304 41 0 0 chrX 45991142 45991289 -120659007 - B1_Mus1 SINE Alu 0 148 2 1 935 421 266 0 0 chrX 45991447 45991541 -120658755 - ID_B1 SINE B4 -1 223 130 1 935 865 232 52 0 chrX 45991591 45991785 -120658511 - B3 SINE B2 -10 206 3 1 935 717 306 96 22 chrX 45991929 45992200 -120658096 - MER2 DNA MER2_type -31 314 24 1 935 207 108 0 26 chrX 45992227 45992265 -120658031 + (TTA)n Simple_repeat Simple_repeat 2 38 0 1 935 276 244 131 24 chrX 45992273 45992357 -120657939 - RSINE1 SINE B4 -17 148 56 1 935 948 77 0 0 chrX 45992716 45992846 -120657450 + (TTTC)n Simple_repeat Simple_repeat 1 130 0 1 935 882 156 0 34 chrX 45992846 45992987 -120657309 - B1_Mur4 SINE Alu -9 141 5 1 935 890 192 0 7 chrX 45992995 45993142 -120657154 - B1_Mur3 SINE Alu -3 146 1 1 935 21 0 0 0 chrX 45993947 45993968 -120656328 + AT_rich Low_complexity Low_complexity 1 21 0 1 935 537 214 9 9 chrX 45993998 45994111 -120656185 - PB1D10 SINE Alu -4 113 1 1 935 788 210 29 0 chrX 45994130 45994268 -120656028 - B1_Mur3 SINE Alu -7 142 1 1 935 241 267 0 0 chrX 45994624 45994684 -120655612 + B3 SINE B2 1 60 -156 1 935 292 88 0 123 chrX 45994830 45994895 -120655401 + B3A SINE B2 1 57 -141 1 935 368 136 195 12 chrX 45994882 45994964 -120655332 + B1_Mus2 SINE Alu 51 147 0 1 935 674 242 55 37 chrX 45994989 45995148 -120655148 + B3 SINE B2 27 189 -27 1 935 294 95 0 0 chrX 45995148 45995190 -120655106 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 935 497 239 8 17 chrX 45996168 45996287 -120654009 - Lx8 LINE L1 -201 7272 7155 1 935 334 241 25 25 chrX 45996279 45996360 -120653936 - Lx8 LINE L1 -250 7223 7143 1 935 1456 239 90 9 chrX 45996362 45996616 -120653680 - L1MB2 LINE L1 -109 6062 5781 1 935 330 67 0 0 chrX 45996616 45996661 -120653635 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 935 1456 239 90 9 chrX 45996661 45996849 -120653447 - L1MB2 LINE L1 -391 5780 5584 1 935 289 294 0 29 chrX 45996971 45997041 -120653255 + ID4_ SINE ID 5 72 -11 1 935 439 367 82 99 chrX 45997101 45997417 -120652879 - Charlie8 DNA MER1_type -1970 458 151 1 935 1197 208 14 5 chrX 45997417 45997630 -120652666 - B3 SINE B2 0 216 2 1 935 439 367 82 99 chrX 45997630 45997767 -120652529 - Charlie8 DNA MER1_type -2278 150 13 1 935 272 286 27 109 chrX 45998065 45998175 -120652121 + B4 SINE B4 2 102 -190 1 935 845 85 0 0 chrX 45998385 45998503 -120651793 - Lx LINE L1 -1 6653 6536 1 935 267 31 0 0 chrX 45998503 45998535 -120651761 + (CCCA)n Simple_repeat Simple_repeat 1 32 0 1 935 606 301 40 17 chrX 45998537 45998713 -120651583 + B4 SINE B4 99 278 -14 1 935 273 324 149 61 chrX 45998847 45998995 -120651301 + RSINE1 SINE B4 5 165 0 1 935 318 163 0 0 chrX 45999206 45999255 -120651041 - HAL1-3A_ME LINE L1 -835 2023 1975 1 935 497 197 109 80 chrX 45999306 45999444 -120650852 - B4 SINE B4 -61 231 90 1 935 700 186 100 8 chrX 45999641 45999771 -120650525 - B1_Mur1 SINE Alu -7 142 1 1 935 270 250 33 67 chrX 45999908 45999998 -120650298 - B1F SINE Alu -24 123 37 1 935 713 242 199 81 chrX 46000200 46000461 -120649835 - B4 SINE B4 0 292 1 1 935 310 129 32 0 chrX 46000513 46000575 -120649721 + CT-rich Low_complexity Low_complexity 2 65 0 2 935 1075 133 0 0 chrX 46000577 46000727 -120649569 - B1_Mur4 SINE Alu 0 150 1 3 935 509 221 78 16 chrX 46000728 46000857 -120649439 - B3A SINE B2 -4 194 58 4 935 965 213 38 57 chrX 46000914 46001123 -120649173 - B3 SINE B2 -11 205 1 5 935 510 189 110 39 chrX 46001141 46001268 -120649028 - B1_Mur1 SINE Alu -10 139 4 6 935 612 324 32 35 chrX 46001273 46001644 -120648652 - L1M2 LINE L1 -3390 2753 2384 7 935 355 295 0 0 chrX 46001644 46001722 -120648574 - ID4_ SINE ID 0 83 6 8 935 433 293 25 58 chrX 46001732 46002008 -120648288 - L1M2 LINE L1 -3464 2383 2118 7 935 751 188 265 0 chrX 46002052 46002222 -120648074 + B3 SINE B2 2 216 0 9 935 682 253 19 19 chrX 46002359 46002520 -120647776 - B3A SINE B2 -15 183 23 1 935 1121 304 42 94 chrX 46003249 46003956 -120646340 - L1MB7 LINE L1 -9 6175 5482 1 935 4596 52 38 0 chrX 46003956 46004512 -120645784 + Lx3_Mus LINE L1 6431 7007 -2 1 935 1121 304 42 94 chrX 46004512 46004579 -120645717 - L1MB7 LINE L1 -703 5481 5435 1 935 947 131 14 20 chrX 46004579 46004727 -120645569 - B1_Mus1 SINE Alu -1 147 1 1 935 1121 304 42 94 chrX 46004727 46004763 -120645533 - L1MB7 LINE L1 -750 5434 5406 1 935 376 219 35 55 chrX 46004771 46004916 -120645380 - L1MB7 LINE L1 -907 5239 5098 1 935 1200 85 0 0 chrX 46005651 46005792 -120644504 - B1_Mus2 SINE Alu -5 142 2 1 935 250 273 12 105 chrX 46005803 46005889 -120644407 - B1_Mus2 SINE Alu -65 82 5 1 935 301 256 72 72 chrX 46005816 46005913 -120644383 - ID_B1 SINE B4 -68 156 60 1 936 756 110 0 0 chrX 46006860 46006969 -120643327 - BC1_Mm scRNA scRNA -43 109 1 1 936 785 211 194 0 chrX 46007164 46007339 -120642957 + B3 SINE B2 2 210 -6 1 936 317 305 0 19 chrX 46007803 46007910 -120642386 - MIR SINE MIR -2 260 156 1 936 340 271 214 7 chrX 46008154 46008299 -120641997 + MER5B DNA MER1_type 2 176 -2 2 936 313 289 0 26 chrX 46008370 46008448 -120641848 - MER5A DNA MER1_type -86 103 28 2 936 952 249 19 24 chrX 46008705 46008915 -120641381 + B3 SINE B2 8 216 0 2 936 24 77 0 0 chrX 46009374 46009426 -120640870 + AT_rich Low_complexity Low_complexity 1 52 0 2 936 344 330 29 0 chrX 46009426 46009529 -120640767 - B1F SINE Alu -10 139 34 2 936 707 300 58 17 chrX 46009717 46010081 -120640215 - L1MB8 LINE L1 -115 6063 5678 2 936 219 310 47 12 chrX 46010131 46010216 -120640080 - L2a LINE L2 -67 3359 3272 2 936 21 0 0 0 chrX 46010255 46010276 -120640020 + AT_rich Low_complexity Low_complexity 1 21 0 2 936 308 361 83 44 chrX 46010413 46010860 -120639436 - L2a LINE L2 -8 3418 2893 2 936 817 134 82 7 chrX 46010860 46010995 -120639301 - B1_Mur4 SINE Alu -1 149 5 2 936 23 0 0 0 chrX 46011355 46011378 -120638918 + AT_rich Low_complexity Low_complexity 1 23 0 3 936 5084 81 31 59 chrX 46011707 46012313 -120637983 - RLTR13D1 LTR ERVK -19 787 200 3 936 1238 55 0 7 chrX 46012313 46012461 -120637835 - B1_Mus2 SINE Alu 0 147 1 3 936 5084 81 31 59 chrX 46012461 46012664 -120637632 - RLTR13D1 LTR ERVK -607 199 1 3 936 626 296 236 4 chrX 46012898 46013156 -120637140 - MLT1F LTR MaLR -45 503 186 3 936 351 265 71 97 chrX 46013514 46013627 -120636669 - ID_B1 SINE B4 0 224 115 3 936 275 309 12 0 chrX 46013637 46013721 -120636575 + L2a LINE L2 3342 3426 0 3 936 648 269 14 7 chrX 46014181 46014323 -120635973 + RSINE1 SINE B4 6 148 -17 3 936 236 244 0 0 chrX 46014341 46014386 -120635910 + (CAAG)n Simple_repeat Simple_repeat 3 47 0 3 936 248 130 22 0 chrX 46014796 46014842 -120635454 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 936 1454 75 11 11 chrX 46015558 46015747 -120634549 - B2_Mm2 SINE B2 -6 189 1 3 936 310 325 184 0 chrX 46016025 46016259 -120634037 - L2c LINE L2 -14 3373 3097 4 936 768 228 174 5 chrX 46016259 46016502 -120633794 - L1MC1 LINE L1 -1661 6124 5840 4 936 1019 211 0 5 chrX 46016517 46016703 -120633593 - B3 SINE B2 -2 214 30 4 936 313 346 64 109 chrX 46016778 46017135 -120633161 - ORR1E LTR MaLR -12 347 7 4 936 1098 255 90 19 chrX 46017139 46017507 -120632789 - L1MC1 LINE L1 -519 5814 5421 4 936 272 244 173 2 chrX 46017814 46017905 -120632391 + L2a LINE L2 3291 3420 -6 4 936 333 319 8 25 chrX 46018053 46018172 -120632124 + L2 LINE L2 2305 2421 -998 4 936 435 327 107 0 chrX 46018204 46018409 -120631887 - MIR SINE MIR -26 236 10 4 936 836 179 57 0 chrX 46018979 46019119 -120631177 + B1_Mur2 SINE Alu 2 149 0 4 936 842 247 67 6 chrX 46019134 46019313 -120630983 + B3 SINE B2 17 206 -10 4 936 186 43 0 0 chrX 46020045 46020068 -120630228 + (CCTG)n Simple_repeat Simple_repeat 3 25 0 4 936 1653 31 5 20 chrX 46020325 46020521 -120629775 + B2_Mm1a SINE B2 1 193 0 5 936 653 165 109 8 chrX 46021015 46021143 -120629153 - B1_Mm SINE Alu 0 147 7 5 936 246 253 114 133 chrX 46021059 46021164 -120629132 - MT2B LTR ERVL -344 257 155 5 936 230 279 0 0 chrX 46021367 46021435 -120628861 + L1M5 LINE L1 5823 5890 -234 5 936 1654 62 0 0 chrX 46022537 46022730 -120627566 - B2_Mm1t SINE B2 0 193 1 5 936 1014 174 98 35 chrX 46022869 46023072 -120627224 - B3 SINE B2 0 216 1 5 936 1271 28 14 0 chrX 46023100 46023245 -120627051 - B1_Mm SINE Alu 0 147 1 5 936 21 0 0 0 chrX 46023254 46023275 -120627021 + AT_rich Low_complexity Low_complexity 1 21 0 5 936 406 193 0 88 chrX 46023275 46023366 -120626930 - B1_Mur2 SINE Alu 0 149 67 5 936 932 231 46 0 chrX 46023392 46023587 -120626709 - B3 SINE B2 -11 205 2 5 936 250 309 93 0 chrX 46023766 46023863 -120626433 - MIRc SINE MIR -33 235 130 6 936 713 166 272 23 chrX 46023889 46024062 -120626234 + B3 SINE B2 1 216 0 6 936 399 248 62 8 chrX 46024242 46024372 -120625924 - L1MA7 LINE L1 0 6291 6155 6 936 734 208 95 15 chrX 46025684 46025884 -120624412 + MER33 DNA MER1_type 1 216 -108 6 936 390 174 109 0 chrX 46025885 46025977 -120624319 + L1MA5 LINE L1 6176 6277 -23 6 936 287 212 15 0 chrX 46026029 46026095 -120624201 + MER33 DNA MER1_type 252 318 -6 6 936 268 172 62 0 chrX 46028972 46029036 -120621260 - MER5A DNA MER1_type -34 155 88 6 936 233 29 0 29 chrX 46029061 46029096 -120621200 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 6 936 558 330 19 24 chrX 46029098 46029309 -120620987 - ID_B1 SINE B4 -14 210 1 6 936 581 267 0 0 chrX 46029375 46029491 -120620805 - PB1D7 SINE Alu -3 117 2 6 936 779 184 49 7 chrX 46029513 46029655 -120620641 - B1_Mur1 SINE Alu 0 149 2 6 936 266 342 193 7 chrX 46029659 46029809 -120620487 - MER5B DNA MER1_type 0 178 1 7 936 321 183 67 0 chrX 46030143 46030203 -120620093 - HAL1-3A_ME LINE L1 -819 2039 1976 7 936 370 271 215 35 chrX 46030418 46030563 -120619733 + MER5A1 DNA MER1_type 1 168 -21 7 936 262 227 0 29 chrX 46030606 46030674 -120619622 - MLT1D LTR MaLR -2 503 438 7 936 583 319 27 27 chrX 46030676 46030863 -120619433 + B3A SINE B2 3 189 -9 7 936 1278 214 5 0 chrX 46030903 46031118 -120619178 + ID_B1 SINE B4 2 217 -7 7 936 399 214 112 0 chrX 46031137 46031226 -120619070 - MLT1D LTR MaLR -59 446 348 7 936 1140 98 75 16 chrX 46031469 46031655 -120618641 + URR1A DNA MER1_type 30 226 0 7 936 297 128 0 0 chrX 46032013 46032060 -120618236 + (TTA)n Simple_repeat Simple_repeat 1 47 0 7 936 312 245 286 0 chrX 46032590 46032688 -120617608 - RSINE1 SINE B4 -36 129 4 7 936 588 282 35 7 chrX 46032721 46032864 -120617432 - RSINE1 SINE B4 -6 159 13 7 936 239 310 86 43 chrX 46033242 46033404 -120616892 - MIR SINE MIR -10 252 84 8 936 1100 260 45 73 chrX 46033799 46034156 -120616140 - ORR1E LTR MaLR -5 354 8 8 936 249 304 118 51 chrX 46034250 46034437 -120615859 - MIR SINE MIR -43 225 23 8 936 612 211 0 26 chrX 46034470 46034587 -120615709 - B3 SINE B2 -9 207 94 8 936 1595 16 11 0 chrX 46034587 46034777 -120615519 - MTA_Mm LTR MaLR 0 396 205 8 936 1240 92 13 127 chrX 46034762 46034999 -120615297 + ORR1A1-int LTR MaLR 1583 1792 0 8 936 2707 55 61 6 chrX 46034999 46035327 -120614969 + ORR1A1 LTR MaLR 1 346 0 8 936 391 247 0 0 chrX 46035340 46035417 -120614879 - B3 SINE B2 -139 77 1 8 936 331 217 337 0 chrX 46035487 46035570 -120614726 - PB1D10 SINE Alu -6 111 1 8 936 679 246 71 38 chrX 46035570 46035781 -120614515 + MLT1D LTR MaLR 30 247 -258 8 936 418 255 10 39 chrX 46035823 46035925 -120614371 + MLT1D LTR MaLR 335 433 -72 8 936 940 271 70 103 chrX 46036102 46036402 -120613894 + B4A SINE B4 1 290 -2 8 936 282 222 0 0 chrX 46036509 46036563 -120613733 + MLT1D LTR MaLR 445 498 -7 8 936 241 127 36 18 chrX 46036655 46036711 -120613585 + T-rich Low_complexity Low_complexity 2 58 0 8 936 219 177 0 0 chrX 46037025 46037087 -120613209 + CT-rich Low_complexity Low_complexity 1 62 0 9 936 258 32 0 0 chrX 46037087 46037118 -120613178 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 936 575 239 146 27 chrX 46037123 46037308 -120612988 - B4 SINE B4 -42 250 44 9 936 1354 92 40 0 chrX 46037410 46037584 -120612712 - B2_Mm2 SINE B2 -14 181 1 9 936 188 34 0 33 chrX 46037596 46037626 -120612670 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 9 936 826 207 20 7 chrX 46037627 46037773 -120612523 + B3A SINE B2 2 149 -49 9 936 300 53 0 0 chrX 46037811 46037849 -120612447 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 9 936 1309 48 0 0 chrX 46038069 46038216 -120612080 + B1_Mus1 SINE Alu 2 148 0 9 936 404 82 16 0 chrX 46038413 46038474 -120611822 + (GA)n Simple_repeat Simple_repeat 1 62 0 9 936 360 204 87 58 chrX 46038744 46038848 -120611448 + B1_Mur1 SINE Alu 42 148 -1 9 936 1064 257 59 19 chrX 46038857 46039127 -120611169 - MTE2b LTR MaLR -41 338 58 1 936 261 276 46 126 chrX 46039135 46039181 -120611115 - MTE2b LTR MaLR -299 80 40 1 936 881 131 266 6 chrX 46039181 46039358 -120610938 + URR1A DNA MER1_type 1 223 -3 1 936 261 276 46 126 chrX 46039358 46039398 -120610898 - MTE2b LTR MaLR -340 39 1 1 936 597 195 131 0 chrX 46040754 46040885 -120609411 - MTD LTR MaLR -73 348 198 1 936 1125 278 45 92 chrX 46040886 46041505 -120608791 - Lx9 LINE L1 0 7473 6864 1 936 1041 212 14 15 chrX 46041591 46041815 -120608481 - MTD LTR MaLR -164 215 13 1 936 428 321 89 16 chrX 46041815 46042005 -120608291 + Lx8 LINE L1 6972 7175 -298 1 936 1332 227 89 30 chrX 46042109 46042481 -120607815 - Lx8 LINE L1 -650 6823 6430 1 936 3505 39 53 10 chrX 46042567 46042774 -120607522 - RLTR10C LTR ERVK 0 436 233 1 936 342 0 0 0 chrX 46042774 46042812 -120607484 + (TC)n Simple_repeat Simple_repeat 2 39 0 1 936 3505 39 53 10 chrX 46042812 46043022 -120607274 - RLTR10C LTR ERVK -204 232 2 1 936 221 241 19 0 chrX 46043230 46043284 -120607012 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 936 223 270 81 74 chrX 46043407 46043555 -120606741 - L2a LINE L2 -284 3142 2994 1 936 873 258 129 43 chrX 46043556 46043811 -120606485 + B4A SINE B4 3 279 -13 1 936 303 226 16 0 chrX 46043865 46043927 -120606369 + Lx8 LINE L1 6354 6416 -1057 1 936 730 300 95 4 chrX 46043947 46044188 -120606108 + L2a LINE L2 3164 3426 0 1 936 4369 31 12 20 chrX 46044340 46044837 -120605459 + MT2_Mm LTR ERVL 1 493 0 1 936 360 0 0 0 chrX 46045873 46045913 -120604383 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 936 638 212 0 8 chrX 46046914 46047033 -120603263 + B1_Mur2 SINE Alu 21 138 -11 1 936 1266 284 22 11 chrX 46047040 46047485 -120602811 + L1M2 LINE L1 4504 4953 -1190 1 936 586 177 233 23 chrX 46047485 46047618 -120602678 - B3A SINE B2 -36 162 2 1 936 245 275 14 14 chrX 46047625 46047695 -120602601 + MIRb SINE MIR 112 181 -87 1 936 404 109 0 0 chrX 46047698 46047753 -120602543 + B1_Mur3 SINE Alu 75 129 -20 1 936 415 112 0 48 chrX 46048655 46048758 -120601538 + C-rich Low_complexity Low_complexity 2 99 0 1 936 229 196 0 0 chrX 46048970 46049016 -120601280 - MIRc SINE MIR -135 133 88 1 936 361 301 1 55 chrX 46049979 46050104 -120600192 - MIRb SINE MIR -40 228 106 1 936 358 143 221 0 chrX 46050320 46050397 -120599899 - B1_Mur4 SINE Alu 0 150 57 1 936 243 356 27 0 chrX 46050478 46050551 -120599745 + MIRm SINE MIR 194 268 -8 1 936 467 296 52 0 chrX 46050716 46050851 -120599445 + B1F1 SINE Alu 1 142 -7 1 936 263 120 40 0 chrX 46051293 46051343 -120598953 - B1_Mus2 SINE Alu -24 123 72 1 936 669 182 41 0 chrX 46051347 46051468 -120598828 - B1_Mur4 SINE Alu -24 126 1 1 936 467 296 107 56 chrX 46051515 46051965 -120598331 - L1MC LINE L1 -1541 4605 4133 1 936 37255 29 0 0 chrX 46052161 46058812 -120591484 - L1Md_T LINE L1 0 6585 1 1 936 249 221 28 42 chrX 46058915 46058986 -120591310 - L1M5 LINE L1 -3129 3017 2948 1 936 28 0 0 0 chrX 46059097 46059125 -120591171 + AT_rich Low_complexity Low_complexity 1 28 0 1 936 988 191 107 0 chrX 46059125 46059303 -120590993 - B3 SINE B2 -19 197 1 1 936 1809 57 13 0 chrX 46060485 46060715 -120589581 + L1_Mus2 LINE L1 6333 6565 -1 1 936 750 114 184 16 chrX 46061025 46061150 -120589146 - B1_Mus1 SINE Alu 0 148 3 1 936 1007 135 0 6 chrX 46061150 46061321 -120588975 + (TTTC)n Simple_repeat Simple_repeat 2 171 0 1 936 242 240 0 20 chrX 46061322 46061373 -120588923 - B4 SINE B4 -80 212 163 1 936 851 178 6 0 chrX 46061375 46061544 -120588752 + CT-rich Low_complexity Low_complexity 2 171 0 1 936 457 279 211 6 chrX 46061545 46061711 -120588585 - B4 SINE B4 -87 205 6 1 936 373 342 37 56 chrX 46061775 46061936 -120588360 + Charlie17a DNA MER1_type 1 158 -61 1 936 336 219 68 0 chrX 46063706 46063779 -120586517 - ID4 SINE ID -5 78 1 1 936 328 136 106 0 chrX 46063854 46063920 -120586376 - L1MB5 LINE L1 -8 6166 6094 1 936 696 245 244 30 chrX 46064092 46064561 -120585735 - Lx9 LINE L1 -92 7552 6983 1 936 625 123 32 0 chrX 46065977 46066085 -120584211 + B1_Mus2 SINE Alu 2 120 0 1 936 379 274 65 78 chrX 46066085 46066168 -120584128 + B4 SINE B4 87 275 -17 1 936 2015 244 53 10 chrX 46067016 46067525 -120582771 - Lx9 LINE L1 -644 7000 6470 1 936 1224 158 53 22 chrX 46067540 46067766 -120582530 - RLTR14 LTR ERV1 -148 234 2 1 936 379 217 0 0 chrX 46067767 46067836 -120582460 - RLTR14-int LTR ERV1 0 5317 5249 1 936 2939 190 145 89 chrX 46067838 46068865 -120581431 + RLTR25A LTR ERVK 1 1085 -18 1 936 2131 98 37 12 chrX 46068868 46069189 -120581107 - RLTR14-int LTR ERV1 -66 5251 4923 1 936 1776 272 59 60 chrX 46069256 46070085 -120580211 + L1_Rod LINE L1 3798 4625 -1222 1 936 8399 35 3 5 chrX 46070214 46071390 -120578906 - L1Md_F2 LINE L1 -1 6581 5408 1 936 8455 28 0 0 chrX 46071378 46072353 -120577943 + L1Md_F2 LINE L1 4459 5433 -450 1 936 7934 84 13 19 chrX 46072992 46075028 -120575268 - L1VL2 LINE L1 -3694 2452 393 1 936 11737 149 34 41 chrX 46075029 46077149 -120573147 - RLTR14-int LTR ERV1 -379 4938 2834 1 936 4227 204 46 42 chrX 46077203 46078890 -120571406 - RLTR14-int LTR ERV1 -3686 3920 1322 1 936 1782 154 68 15 chrX 46078985 46079322 -120570974 - RLTR14-int LTR ERV1 -4030 1287 933 1 936 406 242 10 0 chrX 46079392 46079491 -120570805 - RLTR14-int LTR ERV1 -4390 927 828 1 936 1077 197 146 103 chrX 46079497 46079894 -120570402 + RLTR14-int LTR ERV1 377 790 -4527 1 936 1066 152 28 11 chrX 46079947 46080126 -120570170 - RLTR14 LTR ERV1 -200 182 1 1 936 1442 172 47 0 chrX 46080126 46080405 -120569891 - Lx7 LINE L1 -741 6955 6664 1 936 3163 39 3 0 chrX 46080406 46080794 -120569502 - MTA_Mm LTR MaLR -7 389 1 1 936 22223 161 36 74 chrX 46080794 46083951 -120566345 - Lx7 LINE L1 -1028 6668 3667 1 936 1237 62 7 0 chrX 46083951 46084097 -120566199 - B1_Mm SINE Alu 0 147 1 1 936 22223 146 36 93 chrX 46084097 46085837 -120564459 - Lx7 LINE L1 -2214 3666 2083 1 936 291 54 0 0 chrX 46085837 46085874 -120564422 + (TTG)n Simple_repeat Simple_repeat 3 39 0 1 936 22223 146 36 93 chrX 46085874 46086090 -120564206 - Lx7 LINE L1 -3798 2082 1858 1 936 3611 187 44 29 chrX 46086090 46086816 -120563480 + RMER19A LTR ERVK 1 737 0 1 936 22223 188 47 53 chrX 46086816 46088037 -120562259 - Lx7 LINE L1 -4023 1857 583 1 936 320 219 0 88 chrX 46088354 46088434 -120561862 - MTEa LTR MaLR -194 185 113 1 936 3313 89 69 42 chrX 46088612 46089117 -120561179 + MURVY-LTR LTR ERV1 1 519 0 1 936 3085 51 77 3 chrX 46089482 46089874 -120560422 - BGLII_Mus LTR ERVK 0 422 2 1 936 225 310 0 65 chrX 46089934 46089996 -120560300 - RSINE1 SINE B4 0 165 108 1 936 457 314 70 92 chrX 46089967 46090240 -120560056 - B4 SINE B4 -11 281 15 1 936 479 147 129 0 chrX 46090385 46090501 -120559795 + Lx5 LINE L1 6920 7050 0 1 936 302 313 40 20 chrX 46090584 46090605 -120559691 - ID_B1 SINE B4 -36 188 86 1 936 348 300 12 0 chrX 46090605 46090685 -120559611 - PB1D10 SINE Alu -32 85 5 1 936 235 136 0 83 chrX 46091193 46091241 -120559055 - PB1 SINE Alu 0 127 74 1 936 244 209 0 0 chrX 46091332 46091375 -120558921 + Lx9 LINE L1 7374 7416 -228 1 936 555 78 0 0 chrX 46091375 46091452 -120558844 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 936 246 62 0 0 chrX 46091493 46091525 -120558771 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 936 261 153 86 86 chrX 46091528 46091621 -120558675 + Lx9 LINE L1 7545 7637 -7 1 936 716 270 0 53 chrX 46091642 46091849 -120558447 + B3A SINE B2 3 198 0 1 936 33980 41 35 7 chrX 46091854 46096952 -120553344 + L1Md_T LINE L1 255 5589 -297 1 936 8793 45 0 0 chrX 46096952 46097948 -120552348 + L1Md_T LINE L1 5590 6585 0 1 936 1422 251 17 12 chrX 46097948 46097994 -120552302 + L1M1 LINE L1 5616 5664 -636 1 936 1133 224 29 0 chrX 46098573 46098783 -120551513 + B3 SINE B2 1 216 0 1 936 574 273 16 0 chrX 46098943 46099064 -120551232 + RSINE1 SINE B4 2 124 -41 1 936 603 39 0 0 chrX 46099066 46099144 -120551152 + (CA)n Simple_repeat Simple_repeat 2 79 0 1 936 1146 201 5 45 chrX 46099189 46099413 -120550883 - B3 SINE B2 0 216 2 1 936 324 228 0 20 chrX 46099599 46099747 -120550549 + (CA)n Simple_repeat Simple_repeat 2 146 0 1 936 5503 56 0 12 chrX 46099777 46100429 -120549867 - L1Md_F2 LINE L1 -2 6580 5937 1 936 735 254 93 5 chrX 46100616 46100810 -120549486 + B3 SINE B2 1 211 -5 1 936 405 0 0 0 chrX 46100966 46101011 -120549285 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 936 9847 81 31 16 chrX 46101060 46101075 -120549221 - Lx3_Mus LINE L1 -5 7004 6995 1 936 730 80 27 0 chrX 46101075 46101187 -120549109 - L1_Mus3 LINE L1 -6 6632 6518 1 936 18124 72 16 50 chrX 46101187 46104955 -120545341 - Lx3_Mus LINE L1 -15 6994 3329 1 936 5781 74 6 1 chrX 46104965 46105682 -120544614 - L1_Mus2 LINE L1 0 6566 5847 1 936 7511 91 6 2 chrX 46105682 46106701 -120543595 + L1_Mus2 LINE L1 4844 5866 -17 1 936 3331 106 13 31 chrX 46106704 46107308 -120542988 - Lx3_Mus LINE L1 -2547 3339 2799 1 936 1375 212 144 59 chrX 46107308 46107780 -120542516 + RMER2 LTR ERV1 55 566 -1 1 936 441 0 0 0 chrX 46107840 46107889 -120542407 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 936 225 0 0 0 chrX 46107889 46107913 -120542383 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 936 1129 209 69 104 chrX 46107915 46108320 -120541976 - RMER6B LTR ERVK -70 391 1 1 936 619 286 85 23 chrX 46108552 46108810 -120541486 + MLT2C1 LTR ERVL 1 274 -123 1 936 27350 25 1 0 chrX 46108820 46115484 -120534812 - L1Md_T LINE L1 0 6585 1 1 936 426 265 150 8 chrX 46115663 46115796 -120534500 + MTE2b LTR MaLR 1 152 -227 1 936 1438 152 5 5 chrX 46115797 46116021 -120534275 - URR1B DNA MER1_type -1 224 1 1 936 1290 60 0 0 chrX 46117469 46117753 -120532543 + (TG)n Simple_repeat Simple_repeat 1 284 0 1 936 544 252 332 0 chrX 46117753 46117955 -120532341 - B4 SINE B4 -23 269 1 1 936 2111 42 3 71 chrX 46117999 46118307 -120531989 - L1_Mus2 LINE L1 -1 6565 6279 1 936 207 0 0 0 chrX 46118353 46118376 -120531920 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 936 828 188 177 36 chrX 46118641 46118775 -120531521 - Lx9 LINE L1 -1 7643 7516 1 936 609 69 0 0 chrX 46118775 46118862 -120531434 + (CA)n Simple_repeat Simple_repeat 1 87 0 1 936 828 188 177 36 chrX 46118862 46118976 -120531320 - Lx9 LINE L1 -129 7515 7360 1 936 497 193 165 0 chrX 46118975 46119084 -120531212 + Lx9 LINE L1 6514 6640 -1004 1 936 794 211 0 17 chrX 46119109 46119287 -120531009 - Lx9 LINE L1 -297 7347 7173 1 936 1597 195 20 6 chrX 46119312 46119662 -120530634 + Lx2B LINE L1 6598 6952 -48 1 936 2911 46 0 0 chrX 46119665 46120011 -120530285 + ORR1A1 LTR MaLR 1 346 0 2 936 12152 55 18 1 chrX 46120011 46121641 -120528655 + ORR1A1-int LTR MaLR 1 1658 -134 2 936 7848 39 0 11 chrX 46121649 46123061 -120527235 - L1Md_F2 LINE L1 -13 6569 5174 2 936 6288 65 2 0 chrX 46123053 46123903 -120526393 + L1Md_F2 LINE L1 4262 5113 -770 2 936 1126 54 7 0 chrX 46123903 46124051 -120526245 + ORR1A1-int LTR MaLR 1644 1792 0 2 936 2932 40 0 0 chrX 46124051 46124397 -120525899 + ORR1A1 LTR MaLR 1 346 0 2 936 26 0 0 0 chrX 46124416 46124442 -120525854 + AT_rich Low_complexity Low_complexity 1 26 0 2 936 2077 163 64 5 chrX 46124442 46124830 -120525466 + RLTR25B LTR ERVK 289 699 -329 2 936 477 0 0 0 chrX 46125102 46125155 -120525141 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 936 1965 100 54 69 chrX 46125887 46126221 -120524075 - ORR1A4 LTR MaLR 0 329 1 2 936 4010 120 61 117 chrX 46126221 46127052 -120523244 - ORR1A4-int LTR MaLR 0 1963 1179 2 936 1979 138 9 6 chrX 46127052 46127374 -120522922 - Lx4A LINE L1 -57 7001 6679 2 936 1649 132 0 64 chrX 46127374 46127657 -120522639 - ORR1A4 LTR MaLR -39 290 26 2 936 779 307 0 30 chrX 46127738 46127936 -120522360 - B3 SINE B2 -7 209 18 2 936 227 244 165 50 chrX 46127942 46128063 -120522233 - MER3 DNA MER1_type -30 179 45 2 936 1820 158 47 60 chrX 46128075 46128233 -120522063 + ORR1B2 LTR MaLR 1 146 -221 2 936 1249 113 5 5 chrX 46128233 46128419 -120521877 - B2_Mm2 SINE B2 -9 186 1 2 936 1820 158 47 60 chrX 46128419 46128624 -120521672 + ORR1B2 LTR MaLR 147 359 -8 2 936 2241 133 14 70 chrX 46128697 46129110 -120521186 + ORR1B1 LTR MaLR 1 390 -4 2 936 319 301 148 87 chrX 46129303 46129452 -120520844 - B3A SINE B2 0 198 41 2 936 1132 229 0 0 chrX 46129639 46129849 -120520447 - B3 SINE B2 -6 210 1 2 936 267 31 0 0 chrX 46130730 46130762 -120519534 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 936 5450 211 101 27 chrX 46130882 46132282 -120518014 + Lx6 LINE L1 5779 7281 -179 2 936 1305 196 28 0 chrX 46132305 46132555 -120517741 - Lx6 LINE L1 -829 6631 6375 2 936 493 188 0 35 chrX 46132606 46132722 -120517574 + Lx7 LINE L1 7578 7689 -7 2 936 2339 80 0 0 chrX 46132740 46133040 -120517256 - L1_Mus2 LINE L1 -2 6564 6265 2 936 560 300 20 7 chrX 46133418 46133569 -120516727 - B4A SINE B4 -137 155 3 2 936 620 244 92 107 chrX 46133569 46133764 -120516532 - ID_B1 SINE B4 -32 192 1 2 936 755 184 16 7 chrX 46134794 46134936 -120515360 - B1_Mus1 SINE Alu 0 148 5 2 936 189 0 0 0 chrX 46135408 46135429 -120514867 + (T)n Simple_repeat Simple_repeat 1 21 0 2 936 1252 34 0 0 chrX 46135429 46135576 -120514720 - B1_Mus2 SINE Alu 0 147 1 2 936 486 88 0 0 chrX 46135791 46135859 -120514437 + (TA)n Simple_repeat Simple_repeat 1 68 0 2 936 21 0 0 0 chrX 46135867 46135888 -120514408 + AT_rich Low_complexity Low_complexity 1 21 0 2 936 351 73 109 0 chrX 46135888 46135943 -120514353 + RLTR19B LTR ERVK 655 715 0 2 936 365 255 92 0 chrX 46135944 46136042 -120514254 - L2a LINE L2 -8 3418 3312 2 936 1615 213 0 0 chrX 46136125 46136425 -120513871 - Lx6 LINE L1 -26 7434 7135 2 936 1137 101 0 0 chrX 46136425 46136573 -120513723 + B1_Mus1 SINE Alu 1 148 0 2 14 31536 84 6 10 chrX 46136590 46141981 -120508315 + L1Md_F2 LINE L1 217 5584 -299 2 937 6987 71 50 2 chrX 46141984 46142934 -120507362 + L1Md_F2 LINE L1 5588 6582 0 2 937 1814 200 126 22 chrX 46143013 46143459 -120506837 - Lx6 LINE L1 -312 7148 6657 2 937 1965 157 0 39 chrX 46143470 46143531 -120506765 - ORR1A2 LTR MaLR -9 318 267 2 937 1305 89 17 0 chrX 46143531 46143711 -120506585 + B2_Mm1t SINE B2 2 184 -9 2 937 1965 157 0 39 chrX 46143711 46143980 -120506316 - ORR1A2 LTR MaLR -61 266 1 2 937 3654 126 392 7 chrX 46143980 46144794 -120505502 - ORR1A2-int LTR MaLR 0 1963 837 2 937 2676 199 39 44 chrX 46144800 46144891 -120505405 - Lx6 LINE L1 -1013 6447 6367 2 937 212 0 0 35 chrX 46144899 46144928 -120505368 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2 937 1104 89 0 7 chrX 46144928 46145066 -120505230 - B1_Mus1 SINE Alu -9 139 2 2 937 2676 199 39 43 chrX 46145066 46145623 -120504673 - Lx6 LINE L1 -1094 6366 5809 2 937 5030 173 58 27 chrX 46145646 46146695 -120503601 - Lx5 LINE L1 -3 7047 5966 2 937 2086 149 0 47 chrX 46146698 46147063 -120503233 - ORR1B1 LTR MaLR -8 386 39 2 937 1587 111 52 0 chrX 46147067 46147319 -120502977 - Lx5 LINE L1 -1079 5971 5707 2 937 306 190 0 0 chrX 46147312 46147370 -120502926 - L1_Mur3 LINE L1 -1088 4792 4735 2 937 270 284 106 35 chrX 46147403 46147516 -120502780 + MIR3 SINE MIR 65 185 -23 2 937 500 328 155 14 chrX 46147605 46148033 -120502263 - L2a LINE L2 -102 3324 2851 2 937 209 397 0 0 chrX 46148161 46148234 -120502062 + L2a LINE L2 3354 3426 0 2 937 847 169 0 39 chrX 46149360 46149514 -120500782 + B1_Mur4 SINE Alu 3 150 0 2 937 5367 63 1 1 chrX 46149516 46150199 -120500097 + L1_Mus1 LINE L1 5885 6567 0 2 937 1235 55 6 0 chrX 46151328 46151492 -120498804 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 2 937 25 0 0 0 chrX 46151655 46151680 -120498616 + AT_rich Low_complexity Low_complexity 1 25 0 2 937 195 268 0 44 chrX 46152110 46152200 -120498096 - MIRc SINE MIR -148 114 33 2 937 1968 118 6 22 chrX 46152658 46152978 -120497318 + Lx2 LINE L1 6683 6997 0 2 937 1521 212 109 0 chrX 46153001 46153119 -120497177 - ORR1D1 LTR MaLR -5 369 252 2 937 183 80 0 0 chrX 46153119 46153144 -120497152 + (CAGG)n Simple_repeat Simple_repeat 4 28 0 2 937 1521 212 109 0 chrX 46153144 46153355 -120496941 - ORR1D1 LTR MaLR -123 251 5 2 937 189 0 0 0 chrX 46153598 46153619 -120496677 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2 937 621 257 78 27 chrX 46154941 46155237 -120495059 - L1_Rod LINE L1 -410 5437 5127 2 937 314 235 86 9 chrX 46155256 46155372 -120494924 + L1MA4 LINE L1 5806 5930 -370 2 937 695 52 0 10 chrX 46157666 46157763 -120492533 + (TC)n Simple_repeat Simple_repeat 2 97 0 2 937 194 160 0 20 chrX 46158155 46158206 -120492090 + (CAT)n Simple_repeat Simple_repeat 2 51 0 2 937 362 264 88 0 chrX 46158574 46158665 -120491631 + B3A SINE B2 5 103 -95 2 937 601 265 7 7 chrX 46158731 46158868 -120491428 - B1F SINE Alu 0 149 13 2 937 526 315 16 113 chrX 46158732 46158979 -120491317 - ID_B1 SINE B4 0 224 2 2 937 683 203 88 0 chrX 46159087 46159235 -120491061 + L1_Mur3 LINE L1 5431 5591 -289 2 937 3184 159 12 12 chrX 46159245 46159947 -120490349 - Lx6 LINE L1 -1453 6007 5309 2 937 1440 189 11 127 chrX 46159964 46160327 -120489969 - ORR1A4 LTR MaLR -8 321 1 2 937 1233 148 22 5 chrX 46160335 46160559 -120489737 - Lx6 LINE L1 -1246 4634 4407 2 937 6046 188 53 35 chrX 46160559 46160638 -120489658 - RMER12 LTR ERVK 0 1322 1261 2 937 1178 83 0 16 chrX 46160638 46160821 -120489475 + L1Md_F2 LINE L1 6403 6582 0 2 937 6046 188 53 35 chrX 46160821 46162039 -120488257 - RMER12 LTR ERVK -62 1260 1 2 937 2959 123 26 9 chrX 46162039 46162578 -120487718 - Lx6 LINE L1 -1468 4412 3865 2 937 2839 173 15 23 chrX 46162579 46163099 -120487197 - RMER20A LTR ERVK 0 516 1 2 937 12103 168 24 15 chrX 46163099 46163949 -120486347 - Lx6 LINE L1 -2011 3869 3009 2 937 2393 93 16 0 chrX 46163949 46164271 -120486025 + ORR1A2 LTR MaLR 1 327 0 2 937 12103 168 24 15 chrX 46164271 46165228 -120485068 - Lx6 LINE L1 -2872 3008 2076 2 937 201 74 0 0 chrX 46165228 46165255 -120485041 + (TGG)n Simple_repeat Simple_repeat 3 29 0 2 937 12103 181 47 17 chrX 46165255 46166679 -120483617 - Lx6 LINE L1 -3805 2075 569 2 937 405 0 0 0 chrX 46166752 46166797 -120483499 + (GA)n Simple_repeat Simple_repeat 1 45 0 2 937 315 255 41 0 chrX 46166799 46166897 -120483399 + Lx7 LINE L1 7595 7696 0 2 937 2389 227 20 28 chrX 46167595 46168134 -120482162 + Lx5 LINE L1 6513 7047 -3 2 937 3836 168 93 26 chrX 46168632 46169440 -120480856 + RLTR25B LTR ERVK 1 862 -166 2 937 618 190 109 128 chrX 46169759 46169931 -120480365 + RLTR25B LTR ERVK 742 913 -115 2 937 303 28 0 0 chrX 46169931 46169967 -120480329 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 937 279 0 0 0 chrX 46169967 46169997 -120480299 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 937 618 190 109 128 chrX 46169997 46170089 -120480207 + RLTR25B LTR ERVK 914 1001 -27 2 937 721 243 89 0 chrX 46170086 46170255 -120480041 - B3 SINE B2 -32 184 1 2 937 1029 228 5 14 chrX 46171261 46171470 -120478826 + B3 SINE B2 3 209 -7 2 937 576 0 0 0 chrX 46171862 46171926 -120478370 + (TC)n Simple_repeat Simple_repeat 2 65 0 2 937 1127 64 0 0 chrX 46171930 46172071 -120478225 - B1_Mm SINE Alu -6 141 1 2 937 504 232 113 60 chrX 46172196 46172347 -120477949 - B3 SINE B2 -57 159 1 2 937 1031 303 32 48 chrX 46172600 46172671 -120477625 - MTE2b LTR MaLR -11 368 297 2 937 1075 29 0 0 chrX 46172671 46172807 -120477489 - L1Md_F2 LINE L1 -8 6574 6439 2 937 1031 303 32 48 chrX 46172807 46173106 -120477190 - MTE2b LTR MaLR -83 296 4 2 937 231 51 0 0 chrX 46173757 46173796 -120476500 + Lx9 LINE L1 7606 7644 0 2 937 794 199 0 7 chrX 46174087 46174234 -120476062 + B1_Mur1 SINE Alu 3 148 -1 2 937 1235 85 80 0 chrX 46174831 46175007 -120475289 - B2_Mm1a SINE B2 -3 190 1 2 937 213 0 53 26 chrX 46175018 46175056 -120475240 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 937 564 308 176 59 chrX 46175286 46175917 -120474379 - RMER1C Other Other -18 1324 620 2 937 261 83 0 0 chrX 46176408 46176444 -120473852 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 937 930 109 14 7 chrX 46176819 46176967 -120473329 - URR1A DNA MER1_type 0 226 78 2 937 3899 185 12 43 chrX 46177029 46177865 -120472431 - RMER13B LTR ERVK -97 811 2 2 937 2827 118 2 0 chrX 46178205 46178280 -120472016 - MTC LTR MaLR -8 413 339 2 937 6092 12 0 0 chrX 46178280 46178962 -120471334 - L1Md_A LINE L1 0 6582 5901 2 937 2827 118 2 0 chrX 46178962 46179294 -120471002 - MTC LTR MaLR -83 338 6 2 937 192 111 0 0 chrX 46179560 46179596 -120470700 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 937 813 242 7 0 chrX 46179605 46179758 -120470538 - B3A SINE B2 -41 157 4 2 937 557 252 62 16 chrX 46179770 46179899 -120470397 - B1F SINE Alu -4 145 11 2 937 202 229 21 0 chrX 46179961 46180009 -120470287 + GA-rich Low_complexity Low_complexity 2 50 0 2 937 654 13 0 0 chrX 46180708 46180783 -120469513 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 2 937 1445 50 16 6 chrX 46180783 46180965 -120469331 - B2_Mm2 SINE B2 -10 185 2 2 937 277 83 32 32 chrX 46181014 46181076 -120469220 + (TCTCTG)n Simple_repeat Simple_repeat 4 65 0 2 937 271 316 109 14 chrX 46181083 46181221 -120469075 - B4 SINE B4 -17 275 125 2 937 249 286 22 112 chrX 46181849 46181983 -120468313 - B3A SINE B2 -67 131 10 2 937 428 286 26 18 chrX 46181870 46181984 -120468312 - B4 SINE B4 -169 123 9 2 937 471 35 0 0 chrX 46182422 46182479 -120467817 + (TC)n Simple_repeat Simple_repeat 2 58 0 2 937 1709 137 286 22 chrX 46183290 46183708 -120466588 - Lx5 LINE L1 -892 6158 5631 3 937 365 181 14 0 chrX 46183704 46183776 -120466520 + Lx5 LINE L1 6195 6267 -783 3 937 1180 184 0 24 chrX 46183773 46183984 -120466312 + Lx5 LINE L1 6465 6670 -380 3 937 801 80 0 0 chrX 46183980 46184093 -120466203 + L1_Mm LINE L1 2304 2416 -3467 3 937 7899 91 15 6 chrX 46184091 46185314 -120464982 - L1VL4 LINE L1 -968 2591 1358 3 937 23 0 0 0 chrX 46185319 46185342 -120464954 + AT_rich Low_complexity Low_complexity 1 23 0 3 937 13027 87 10 8 chrX 46185916 46188090 -120462206 - L1VL2 LINE L1 -627 2988 809 3 937 3149 65 2 2 chrX 46188121 46188524 -120461772 - L1_Mus1 LINE L1 -1 6566 6164 3 937 4033 81 0 5 chrX 46188524 46189104 -120461192 - L1_Mm LINE L1 -987 4896 4320 3 937 1298 98 0 67 chrX 46189090 46189245 -120461051 - L1VL4 LINE L1 -2500 1059 914 3 937 729 0 0 0 chrX 46189245 46189326 -120460970 + (TTC)n Simple_repeat Simple_repeat 1 81 0 3 937 1072 110 7 0 chrX 46189331 46189477 -120460819 - B1_Mus1 SINE Alu -1 147 1 3 937 1298 85 0 64 chrX 46189477 46189636 -120460660 - L1VL4 LINE L1 -5389 913 755 3 937 1407 67 67 0 chrX 46189646 46189841 -120460455 - L1_Mus1 LINE L1 -2 6565 6358 3 937 2785 48 0 0 chrX 46189841 46190193 -120460103 + L1_Mus1 LINE L1 5981 6332 -235 3 937 4347 123 8 0 chrX 46190190 46190858 -120459438 - L1VL4 LINE L1 -5536 766 94 3 937 695 258 46 80 chrX 46190856 46191200 -120459096 - L1VL4 LINE L1 -5562 1070 732 3 937 181 323 116 55 chrX 46191616 46191780 -120458516 + L2c LINE L2 3214 3387 0 3 937 345 245 0 0 chrX 46191922 46192016 -120458280 - L1VL4 LINE L1 -5698 957 864 3 937 441 0 0 0 chrX 46192302 46192351 -120457945 + (CAATA)n Simple_repeat Simple_repeat 3 51 0 3 937 3456 57 60 15 chrX 46192561 46193041 -120457255 - L1Md_F2 LINE L1 0 6582 6081 3 937 1077 164 124 0 chrX 46193762 46193963 -120456333 + URR1A DNA MER1_type 1 226 0 3 937 21 0 0 0 chrX 46194834 46194855 -120455441 + AT_rich Low_complexity Low_complexity 1 21 0 3 937 465 19 0 0 chrX 46195491 46195545 -120454751 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 937 278 325 0 0 chrX 46196616 46196696 -120453600 - ID4_ SINE ID -3 80 1 3 937 253 312 80 90 chrX 46196955 46197254 -120453042 + L2c LINE L2 3075 3370 -17 3 937 242 271 75 0 chrX 46197642 46197775 -120452521 - L1MA10 LINE L1 -20 6314 6172 3 937 22 35 0 0 chrX 46198618 46198647 -120451649 + AT_rich Low_complexity Low_complexity 1 29 0 3 937 35490 28 2 7 chrX 46199661 46204891 -120445405 + L1Md_A LINE L1 390 5586 -297 3 937 8521 29 0 0 chrX 46204891 46205886 -120444410 + L1Md_A LINE L1 5587 6581 -1 3 937 1040 103 20 0 chrX 46205958 46206104 -120444192 + B1_Mur4 SINE Alu 2 150 0 3 937 671 283 6 6 chrX 46208558 46208725 -120441571 + RMER30 DNA MER1_type 2 168 -34 3 937 442 173 0 0 chrX 46211699 46211780 -120438516 - RMER1C Other Other -147 1195 1115 3 937 293 186 0 0 chrX 46211779 46211838 -120438458 + RMER1C Other Other 1268 1326 -16 3 937 240 216 0 0 chrX 46212233 46212284 -120438012 + (TATG)n Simple_repeat Simple_repeat 2 52 0 3 937 180 111 0 0 chrX 46212293 46212320 -120437976 + (TCCA)n Simple_repeat Simple_repeat 3 29 0 3 937 4812 96 8 1 chrX 46212785 46213454 -120436842 + L1_Mus4 LINE L1 5957 6629 -7 3 937 310 245 204 0 chrX 46213557 46213655 -120436641 + B1_Mur2 SINE Alu 27 144 -5 3 937 219 196 137 0 chrX 46213871 46213922 -120436374 - B1F SINE Alu -89 60 3 3 937 994 234 44 0 chrX 46214251 46214456 -120435840 - ID_B1 SINE B4 -9 215 2 3 937 242 328 8 15 chrX 46214981 46215111 -120435185 + CT-rich Low_complexity Low_complexity 2 130 0 3 937 530 241 37 0 chrX 46215156 46215264 -120435032 - PB1D9 SINE Alu -8 112 1 3 937 474 272 127 65 chrX 46215854 46216114 -120434182 - B4 SINE B4 -3 289 14 3 937 202 274 20 0 chrX 46216144 46216195 -120434101 + CT-rich Low_complexity Low_complexity 3 54 0 3 937 257 284 73 12 chrX 46216786 46216868 -120433428 - B4A SINE B4 -14 278 192 3 937 261 291 26 26 chrX 46217053 46217166 -120433130 + CT-rich Low_complexity Low_complexity 2 114 0 3 937 527 0 16 0 chrX 46217289 46217352 -120432944 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 3 937 195 162 0 0 chrX 46217750 46217787 -120432509 + (CCTA)n Simple_repeat Simple_repeat 3 39 0 3 937 405 0 0 0 chrX 46217813 46217858 -120432438 + (TCCA)n Simple_repeat Simple_repeat 3 47 0 3 937 243 250 30 73 chrX 46219887 46220051 -120430245 + (CAGG)n Simple_repeat Simple_repeat 2 158 0 3 937 223 307 8 0 chrX 46220518 46220645 -120429651 + (TTATA)n Simple_repeat Simple_repeat 3 130 0 3 937 1188 79 0 0 chrX 46220703 46220868 -120429428 + (TCTA)n Simple_repeat Simple_repeat 2 166 0 3 937 395 38 19 0 chrX 46220868 46220920 -120429376 + (TCCA)n Simple_repeat Simple_repeat 3 56 0 3 937 499 305 63 90 chrX 46222004 46222339 -120427957 + MER31A LTR ERV1 8 333 -152 3 937 357 287 106 0 chrX 46222587 46222681 -120427615 - PB1D10 SINE Alu 0 117 14 3 937 311 274 18 28 chrX 46222709 46222818 -120427478 + CT-rich Low_complexity Low_complexity 2 109 0 3 937 828 233 67 5 chrX 46222937 46223131 -120427165 - B3 SINE B2 -10 206 1 3 937 241 279 45 30 chrX 46223334 46223467 -120426829 + CT-rich Low_complexity Low_complexity 3 137 0 3 937 504 122 0 0 chrX 46223495 46223577 -120426719 + (TG)n Simple_repeat Simple_repeat 1 82 0 3 937 547 232 90 14 chrX 46223582 46223726 -120426570 - B3A SINE B2 -36 162 8 3 937 186 71 0 0 chrX 46224445 46224473 -120425823 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 3 937 442 310 11 32 chrX 46224480 46224714 -120425582 + CT-rich Low_complexity Low_complexity 1 229 0 3 937 319 286 105 53 chrX 46224725 46224858 -120425438 - HAL1-3A_ME LINE L1 -434 2424 2285 3 937 307 296 23 23 chrX 46224860 46225171 -120425125 + CT-rich Low_complexity Low_complexity 1 311 0 3 937 268 303 15 0 chrX 46226358 46226424 -120423872 - ID4_ SINE ID 0 83 17 3 937 481 279 35 21 chrX 46227094 46227237 -120423059 - RSINE1 SINE B4 -20 145 1 3 937 1161 183 66 0 chrX 46228026 46228223 -120422073 - B3 SINE B2 -4 212 3 3 937 219 103 0 0 chrX 46230525 46230564 -120419732 + (A)n Simple_repeat Simple_repeat 1 39 0 3 937 532 259 0 9 chrX 46232029 46232138 -120418158 - PB1D10 SINE Alu -5 112 5 3 937 227 270 0 45 chrX 46232260 46232326 -120417970 + B4A SINE B4 80 142 -150 3 937 469 255 9 45 chrX 46232278 46232389 -120417907 + PB1D10 SINE Alu 10 116 -1 3 937 955 230 164 37 chrX 46232503 46232540 -120417756 - MTD LTR MaLR 0 419 373 3 937 213 65 0 0 chrX 46232540 46232571 -120417725 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 937 955 230 164 37 chrX 46232571 46232831 -120417465 - MTD LTR MaLR -47 372 85 3 937 298 253 27 0 chrX 46232820 46232895 -120417401 + B1F SINE Alu 73 149 0 3 937 622 253 91 8 chrX 46232968 46233036 -120417260 + L1MDa LINE L1 2342 2415 -4218 3 937 6027 74 31 4 chrX 46233036 46233812 -120416484 + L1Md_F2 LINE L1 5786 6582 0 3 937 622 257 110 9 chrX 46233812 46234156 -120416140 + L1MDa LINE L1 2416 2808 -3729 3 937 319 262 71 45 chrX 46234328 46234440 -120415856 - MLT1C LTR MaLR 0 467 353 3 937 542 228 26 26 chrX 46234833 46234950 -120415346 + PB1D9 SINE Alu 1 117 -3 3 937 831 279 178 9 chrX 46235254 46235701 -120414595 - Lx8 LINE L1 -123 7350 6829 3 937 2102 270 152 16 chrX 46236041 46236926 -120413370 + Lx8 LINE L1 6374 7378 -95 3 937 648 38 0 0 chrX 46236926 46237005 -120413291 + (GGAA)n Simple_repeat Simple_repeat 1 79 0 3 937 834 306 65 12 chrX 46237005 46237086 -120413210 + Lx8 LINE L1 7379 7464 -9 3 937 1276 256 48 48 chrX 46238379 46238712 -120411584 - MTD LTR MaLR 0 419 87 3 937 762 288 33 40 chrX 46239094 46239224 -120411072 + Lx7 LINE L1 5550 5681 -166 3 937 2443 153 46 41 chrX 46239224 46239639 -120410657 - MTC LTR MaLR 0 421 5 3 937 762 285 58 56 chrX 46239639 46239856 -120410440 + Lx7 LINE L1 5682 5931 -1765 3 937 1206 62 0 20 chrX 46240147 46240296 -120410000 - B1_Mus1 SINE Alu -1 147 2 3 937 1389 293 49 60 chrX 46240638 46240755 -120409541 - RMER5 LTR ERV1 -2 532 414 3 937 954 234 24 0 chrX 46240755 46240960 -120409336 + B3 SINE B2 2 211 -5 3 937 1389 293 49 60 chrX 46240960 46241376 -120408920 - RMER5 LTR ERV1 -121 413 6 3 937 270 156 0 0 chrX 46241383 46241447 -120408849 + T-rich Low_complexity Low_complexity 1 64 0 3 937 1405 257 55 26 chrX 46241560 46241907 -120408389 - ORR1E LTR MaLR -2 357 1 3 937 1821 206 61 8 chrX 46242071 46242467 -120407829 + MTD LTR MaLR 3 419 0 3 937 648 178 56 25 chrX 46243338 46243479 -120406817 + B1_Mur2 SINE Alu 5 149 0 3 937 21 0 0 0 chrX 46244006 46244027 -120406269 + AT_rich Low_complexity Low_complexity 1 21 0 3 937 234 0 0 0 chrX 46244699 46244725 -120405571 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 3 937 1264 68 0 0 chrX 46244725 46244887 -120405409 - B2_Mm2 SINE B2 -33 162 1 3 937 216 261 0 0 chrX 46245709 46245755 -120404541 + B3A SINE B2 2 47 -151 3 937 279 210 0 46 chrX 46245739 46245804 -120404492 - ORR1B2 LTR MaLR -305 62 1 3 937 519 345 43 19 chrX 46246072 46246282 -120404014 + ORR1E LTR MaLR 1 215 -144 3 937 398 75 15 0 chrX 46246537 46246604 -120403692 + (TC)n Simple_repeat Simple_repeat 1 68 0 3 937 1024 220 55 0 chrX 46246924 46247124 -120403172 - B3 SINE B2 -5 211 1 3 937 764 251 92 96 chrX 46247226 46247756 -120402540 + RLTR12B LTR ERVK 16 513 -55 3 937 1175 303 41 46 chrX 46247821 46248212 -120402084 + MTE-int LTR MaLR 778 1166 -414 3 937 318 206 0 31 chrX 46248213 46248278 -120402018 + B1_Mur1 SINE Alu 86 148 -1 3 937 207 100 0 0 chrX 46248280 46248310 -120401986 + (A)n Simple_repeat Simple_repeat 1 30 0 3 937 370 320 100 44 chrX 46248408 46248748 -120401548 + ORR1D2 LTR MaLR 9 367 -3 3 937 252 279 0 0 chrX 46250527 46250588 -120399708 - MLT1C-int LTR MaLR -1045 326 266 3 937 279 0 0 0 chrX 46250839 46250870 -120399426 + (TTA)n Simple_repeat Simple_repeat 3 33 0 3 937 2297 131 0 18 chrX 46250879 46251221 -120399075 - Lx3B LINE L1 -4 6969 6634 3 937 349 250 101 9 chrX 46251397 46251506 -120398790 - MLT1C-int LTR MaLR -1243 128 10 3 937 584 344 54 84 chrX 46251507 46251898 -120398398 - MLT1C LTR MaLR 0 467 89 3 937 285 320 60 26 chrX 46253939 46254090 -120396206 - L2 LINE L2 -539 2880 2725 4 937 484 292 91 142 chrX 46254107 46254545 -120395751 - MLT1C LTR MaLR -13 454 39 4 937 408 219 134 0 chrX 46254574 46254693 -120395603 + MTEa LTR MaLR 242 376 -3 4 937 321 356 95 7 chrX 46254736 46255019 -120395277 - L2 LINE L2 -685 2734 2427 4 937 441 0 0 0 chrX 46255240 46255289 -120395007 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 937 248 292 67 0 chrX 46255299 46255388 -120394908 - L2 LINE L2 -2611 808 714 4 937 299 345 27 0 chrX 46255990 46256100 -120394196 - PB1 SINE Alu -14 113 1 4 937 325 254 172 0 chrX 46256148 46256270 -120394026 - HAL1b LINE L1 -1 2008 1866 4 937 258 286 0 91 chrX 46256501 46256578 -120393718 - ID4_ SINE ID -13 70 1 4 937 240 235 10 115 chrX 46256683 46256779 -120393517 - L2a LINE L2 -37 3389 3304 4 937 753 199 14 7 chrX 46257046 46257188 -120393108 - B3 SINE B2 -17 199 57 4 937 415 301 19 44 chrX 46257182 46257208 -120393088 - B4A SINE B4 -136 156 1 4 937 419 202 8 112 chrX 46257208 46257342 -120392954 - B3A SINE B2 -78 120 1 4 937 459 35 0 0 chrX 46257528 46257585 -120392711 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 937 504 0 0 0 chrX 46257585 46257640 -120392656 + (GA)n Simple_repeat Simple_repeat 2 57 0 4 937 466 16 32 0 chrX 46258131 46258194 -120392102 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 937 809 287 140 3 chrX 46258213 46258535 -120391761 - Lx8 LINE L1 -190 7283 6918 4 937 234 0 0 0 chrX 46258540 46258566 -120391730 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 937 608 11 45 0 chrX 46259538 46259627 -120390669 + (GA)n Simple_repeat Simple_repeat 1 93 0 4 937 547 254 23 45 chrX 46260748 46260880 -120389416 - B1F1 SINE Alu -7 142 14 4 937 201 306 67 58 chrX 46260950 46261054 -120389242 + MIRb SINE MIR 46 150 -118 4 937 369 320 89 25 chrX 46261159 46261316 -120388980 - MIRb SINE MIR -82 186 20 4 937 306 0 0 0 chrX 46262169 46262203 -120388093 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 4 937 195 239 0 42 chrX 46262322 46262370 -120387926 + L2b LINE L2 3326 3371 -4 4 937 597 242 6 62 chrX 46262642 46262818 -120387478 + Lx8 LINE L1 7228 7393 -80 4 937 406 240 37 28 chrX 46263180 46263287 -120387009 + PB1D10 SINE Alu 2 109 -8 4 937 826 251 34 44 chrX 46263704 46263908 -120386388 - B3 SINE B2 -14 202 1 4 937 544 257 0 9 chrX 46265223 46265337 -120384959 - PB1D10 SINE Alu -2 115 3 4 937 457 303 77 27 chrX 46265424 46265607 -120384689 + MIR SINE MIR 58 249 -13 4 937 930 171 212 0 chrX 46265806 46265976 -120384320 + B3 SINE B2 1 206 -10 4 937 201 161 0 0 chrX 46266061 46266092 -120384204 + polypyrimidine Low_complexity Low_complexity 2 32 0 4 937 270 0 0 0 chrX 46266092 46266122 -120384174 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 937 275 290 118 0 chrX 46266349 46266442 -120383854 + L1_Rod LINE L1 4 107 -7065 4 937 308 203 0 0 chrX 46266439 46266498 -120383798 + Lx9 LINE L1 6959 7017 -627 4 937 243 221 162 0 chrX 46266575 46266643 -120383653 + L1_Rod LINE L1 29 107 -7065 4 937 2672 168 196 0 chrX 46266640 46267207 -120383089 + Lx9 LINE L1 6959 7636 -8 4 937 233 103 0 0 chrX 46267249 46267288 -120383008 + L1_Mus2 LINE L1 6527 6565 -1 4 937 219 69 0 0 chrX 46267317 46267346 -120382950 + (GAAA)n Simple_repeat Simple_repeat 3 31 0 4 937 401 179 12 0 chrX 46267640 46267724 -120382572 + GA-rich Low_complexity Low_complexity 2 86 0 4 937 1459 294 44 61 chrX 46267749 46268185 -120382111 - Lx8 LINE L1 -323 7150 6721 4 937 781 170 89 0 chrX 46268185 46268320 -120381976 - B1_Mur1 SINE Alu -1 148 2 4 117 1459 294 44 61 chrX 46268320 46268426 -120381870 - Lx8 LINE L1 -753 6720 6617 4 938 1248 64 0 0 chrX 46268554 46268710 -120381586 - L1_Mus2 LINE L1 0 6566 6411 4 938 3508 56 2 2 chrX 46268710 46269137 -120381159 + L1_Mus2 LINE L1 5972 6398 -168 4 938 689 197 243 30 chrX 46269325 46269367 -120380929 + Lx2B LINE L1 6714 6769 -231 4 938 684 0 0 0 chrX 46269367 46269443 -120380853 + (TA)n Simple_repeat Simple_repeat 2 77 0 4 938 689 197 243 30 chrX 46269443 46269635 -120380661 + Lx2B LINE L1 6770 6998 -2 4 938 189 107 0 0 chrX 46269806 46269834 -120380462 + (TTCC)n Simple_repeat Simple_repeat 2 29 0 4 938 611 260 8 0 chrX 46269850 46269973 -120380323 - ID_B1 SINE B4 -15 209 86 4 938 623 153 10 0 chrX 46270550 46270648 -120379648 - B1_Mur3 SINE Alu -50 99 1 4 938 203 195 0 24 chrX 46270683 46270725 -120379571 + CT-rich Low_complexity Low_complexity 3 43 0 4 938 385 278 78 24 chrX 46270762 46270933 -120379363 + MIRb SINE MIR 31 223 -45 4 938 255 225 24 62 chrX 46270974 46271075 -120379221 + ORR1C2 LTR MaLR 1 103 -256 4 938 2235 252 39 25 chrX 46271215 46271825 -120378471 - Lx9 LINE L1 -551 7093 6475 4 938 954 278 148 42 chrX 46271826 46272306 -120377990 + Lx9 LINE L1 7114 7644 0 4 938 950 279 43 35 chrX 46272323 46272669 -120377627 + MLT1B LTR MaLR 40 388 -2 4 938 1033 258 214 18 chrX 46272770 46273157 -120377139 - MLT2B1 LTR ERVL -55 465 3 4 938 1119 273 13 23 chrX 46274387 46274691 -120375605 + MLT2D LTR ERVL 1 301 -113 4 938 414 250 99 14 chrX 46275260 46275402 -120374894 - MARNA DNA Mariner -18 568 415 4 938 411 286 25 20 chrX 46275422 46275557 -120374739 - L2c LINE L2 -19 3368 3203 4 938 243 333 6 115 chrX 46275723 46275879 -120374417 - L2c LINE L2 -467 2952 2814 4 938 206 256 0 0 chrX 46275925 46275968 -120374328 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 4 938 830 262 6 18 chrX 46276134 46276301 -120373995 + B3 SINE B2 1 165 -51 4 938 501 71 0 0 chrX 46276304 46276374 -120373922 + (CATA)n Simple_repeat Simple_repeat 1 70 0 4 938 21 0 0 0 chrX 46276456 46276477 -120373819 + AT_rich Low_complexity Low_complexity 1 21 0 4 938 483 302 241 6 chrX 46277091 46277405 -120372891 - MLT1A0 LTR MaLR -2 388 1 4 938 242 316 52 22 chrX 46277508 46277644 -120372652 - L1MEd LINE L1 -5978 141 2 4 938 258 299 0 29 chrX 46278690 46278759 -120371537 - PB1 SINE Alu -20 107 41 4 938 488 102 20 20 chrX 46279363 46279463 -120370833 + (CAAAA)n Simple_repeat Simple_repeat 1 100 0 4 938 4615 133 57 21 chrX 46279749 46280622 -120369674 - Lx2 LINE L1 -352 6645 5977 4 938 1263 138 2 53 chrX 46280621 46280927 -120369369 - L1_Mm LINE L1 -450 5436 5173 4 938 1264 213 45 0 chrX 46280942 46281228 -120369068 + Lx6 LINE L1 860 1158 -6570 4 938 2377 236 43 10 chrX 46281235 46281744 -120368552 - Lx6 LINE L1 -15 7445 6920 4 938 1217 196 12 4 chrX 46281770 46282021 -120368275 + RMER10B LTR ERVL 13 265 -133 4 938 896 174 44 53 chrX 46282027 46282233 -120368063 + RMER10B LTR ERVL 195 398 0 4 938 7674 164 46 11 chrX 46282233 46282764 -120367532 + Lx6 LINE L1 5355 5921 -1539 4 938 3844 2 0 0 chrX 46282764 46283164 -120367132 + L1Md_A LINE L1 6183 6582 0 4 938 7674 229 68 23 chrX 46283164 46284654 -120365642 + Lx6 LINE L1 5922 7459 -1 4 938 254 232 135 48 chrX 46284870 46284974 -120365322 + L1M5 LINE L1 4733 4845 -1301 4 938 3812 248 55 18 chrX 46285028 46286248 -120364048 + L1_Mur3 LINE L1 1 1099 -6613 4 938 2610 78 19 13 chrX 46286248 46286626 -120363670 + L1_Mus3 LINE L1 6251 6630 -8 4 938 427 143 41 0 chrX 46286607 46286705 -120363591 + L1_Mur3 LINE L1 1134 1235 -6477 4 938 236 286 0 16 chrX 46286706 46286770 -120363526 + MTE-int LTR MaLR 378 440 -1140 4 938 929 223 47 28 chrX 46286786 46286998 -120363298 + B3 SINE B2 1 216 0 4 938 228 86 0 0 chrX 46287074 46287109 -120363187 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 4 938 286 284 0 43 chrX 46287271 46287341 -120362955 + MTE-int LTR MaLR 742 808 -772 4 938 565 181 166 7 chrX 46287465 46287610 -120362686 - Lx5 LINE L1 0 7050 6883 4 938 16095 87 1 3 chrX 46288059 46290968 -120359328 - L1_Mus1 LINE L1 0 6567 3663 4 938 1064 67 94 0 chrX 46290967 46291116 -120359180 - L1Md_F2 LINE L1 -458 6124 5962 4 938 1216 126 0 0 chrX 46291115 46291289 -120359007 + L1_Mm LINE L1 5025 5198 -685 4 938 17815 162 22 73 chrX 46291303 46292489 -120357807 - L1_Mm LINE L1 -891 4992 3810 4 938 1082 125 0 6 chrX 46292489 46292666 -120357630 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 4 938 17815 162 22 73 chrX 46292666 46293124 -120357172 - L1_Mm LINE L1 -2074 3809 3558 4 938 5357 76 3 6 chrX 46293124 46293788 -120356508 + L1Md_F2 LINE L1 5909 6570 -12 4 938 17815 162 22 73 chrX 46293788 46295950 -120354346 - L1_Mm LINE L1 -2326 3557 1382 4 938 1715 239 42 25 chrX 46295991 46296190 -120354106 - MTD LTR MaLR -8 411 210 4 938 5585 56 0 11 chrX 46296190 46296854 -120353442 - L1Md_F2 LINE L1 -4 6578 5922 4 938 1715 239 42 25 chrX 46296854 46297058 -120353238 - MTD LTR MaLR -210 209 1 4 938 421 312 32 8 chrX 46297058 46297184 -120353112 - B3A SINE B2 -23 175 47 4 938 240 254 34 0 chrX 46297389 46297448 -120352848 + Lx7 LINE L1 7289 7349 -347 4 938 40 21 0 0 chrX 46297459 46297506 -120352790 + AT_rich Low_complexity Low_complexity 1 47 0 4 938 1585 190 61 15 chrX 46297515 46297841 -120352455 + Lx7 LINE L1 7356 7696 0 4 938 386 279 81 19 chrX 46297865 46298026 -120352270 + L1_Mur3 LINE L1 1471 1641 -4239 4 938 1208 281 43 46 chrX 46298241 46298510 -120351786 + ORR1D2 LTR MaLR 2 268 -102 4 938 189 0 0 0 chrX 46298510 46298531 -120351765 + (ATG)n Simple_repeat Simple_repeat 3 23 0 4 938 1208 281 43 46 chrX 46298531 46298630 -120351666 + ORR1D2 LTR MaLR 269 368 -2 4 938 613 299 119 48 chrX 46298702 46299541 -120350755 + L1MEf LINE L1 1274 2299 -4179 4 938 5254 253 31 143 chrX 46300244 46302329 -120347967 + L1_Mur3 LINE L1 886 2697 -3180 4 938 369 0 0 0 chrX 46302329 46302370 -120347926 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 938 6626 187 26 116 chrX 46302370 46304858 -120345438 + L1_Mur3 LINE L1 2698 4891 -992 4 938 8838 31 0 0 chrX 46302413 46304099 -120346197 - L1Md_T LINE L1 0 6582 4897 4 938 1024 279 127 32 chrX 46304857 46305509 -120344787 + L1M4 LINE L1 2512 3225 -2921 4 938 1083 106 0 0 chrX 46305590 46305750 -120344546 + (GAAA)n Simple_repeat Simple_repeat 3 162 0 4 938 459 319 117 47 chrX 46305763 46306062 -120344234 - MLT1C LTR MaLR 0 467 148 4 938 302 212 93 12 chrX 46306185 46306271 -120344025 + L1M4 LINE L1 3370 3462 -2684 4 938 270 306 71 0 chrX 46306281 46306366 -120343930 + PB1D9 SINE Alu 10 100 -20 4 938 234 260 0 0 chrX 46306370 46306443 -120343853 + GA-rich Low_complexity Low_complexity 2 74 0 4 938 5859 28 29 0 chrX 46306469 46307122 -120343174 - L1Md_T LINE L1 0 6582 5911 4 938 330 296 13 72 chrX 46307173 46307326 -120342970 + L1M4 LINE L1 3588 3731 -2415 4 938 1390 305 109 19 chrX 46307347 46307918 -120342378 + MLT1E3 LTR MaLR 3 624 0 4 938 866 258 82 28 chrX 46307918 46308237 -120342059 + L1M4 LINE L1 3747 4082 -2064 4 938 245 286 49 25 chrX 46308348 46308470 -120341826 + L1M4 LINE L1 5681 5805 -368 4 938 2780 25 85 0 chrX 46308782 46309099 -120341197 + ORR1A1 LTR MaLR 1 344 -2 5 938 3918 32 0 7 chrX 46309227 46309665 -120340631 - L1Md_T LINE L1 -3 6579 6145 5 938 311 260 13 13 chrX 46309751 46309829 -120340467 - ID4 SINE ID -3 80 3 5 938 252 291 28 28 chrX 46309862 46309968 -120340328 + L1ME3B LINE L1 6125 6230 -10 5 938 280 354 205 10 chrX 46310398 46310598 -120339698 - MIR SINE MIR -4 258 20 5 938 1166 90 58 53 chrX 46310839 46311027 -120339269 - B2_Mm2 SINE B2 -6 189 1 5 938 279 261 29 0 chrX 46311278 46311347 -120338949 + CT-rich Low_complexity Low_complexity 2 72 0 5 938 471 118 0 0 chrX 46311347 46311423 -120338873 + (TC)n Simple_repeat Simple_repeat 2 77 0 5 938 447 261 9 35 chrX 46311424 46311539 -120338757 - PB1D10 SINE Alu -5 112 1 5 938 1060 263 132 29 chrX 46312375 46312755 -120337541 + MTD LTR MaLR 1 419 0 5 938 2207 127 0 0 chrX 46313056 46313372 -120336924 - ORR1A3 LTR MaLR -8 318 3 5 938 454 302 151 16 chrX 46313382 46313748 -120336548 - L1MB7 LINE L1 0 6184 5772 5 938 206 235 0 19 chrX 46313968 46314020 -120336276 + GA-rich Low_complexity Low_complexity 4 54 0 5 938 589 93 0 30 chrX 46314054 46314154 -120336142 + (GGAGA)n Simple_repeat Simple_repeat 2 98 0 5 938 5655 100 7 1 chrX 46314186 46314938 -120335358 - L1_Mus4 LINE L1 -5 6631 5876 5 938 8762 31 0 0 chrX 46314984 46316144 -120334152 - L1Md_F2 LINE L1 0 6582 5423 5 938 2013 165 138 78 chrX 46316144 46316695 -120333601 - RLTR6_Mm LTR ERV1 -70 584 1 5 938 62486 34 13 0 chrX 46316695 46324256 -120326040 - RLTR6-int LTR ERV1 0 7778 3 5 938 2061 128 251 28 chrX 46324256 46324722 -120325574 - RLTR6_Mm LTR ERV1 -48 606 37 5 938 244 238 200 38 chrX 46324724 46324829 -120325467 - RLTR6_Mm LTR ERV1 -532 122 1 5 938 18898 135 32 10 chrX 46324829 46328562 -120321734 - L1VL4 LINE L1 -457 5426 1378 5 938 3705 64 0 2 chrX 46328562 46329016 -120321280 - L1Md_F2 LINE L1 0 6582 6130 5 938 18587 186 38 16 chrX 46329016 46329732 -120320564 - L1VL4 LINE L1 -4500 1377 659 5 938 514 247 21 47 chrX 46329717 46329882 -120320414 - L1MB7 LINE L1 -561 5617 5462 5 938 521 256 35 12 chrX 46329997 46330167 -120320129 - L1MB7 LINE L1 -695 5479 5306 5 938 19753 122 30 14 chrX 46330231 46334122 -120316174 - Lx4A LINE L1 -600 6458 2497 5 938 7668 30 0 4 chrX 46334132 46335085 -120315211 - L1Md_F3 LINE L1 -12 6572 5624 5 938 7047 110 34 12 chrX 46335077 46335546 -120314750 - Lx4A LINE L1 -3366 2511 2048 5 938 4401 148 110 81 chrX 46335546 46336540 -120313756 + RLTR13D2 LTR ERVK 1 1023 0 5 938 7047 110 34 12 chrX 46336540 46337181 -120313115 - Lx4A LINE L1 -3830 2047 1382 5 938 2490 118 23 10 chrX 46337181 46337568 -120312728 - Lx LINE L1 0 6654 6263 5 938 7047 110 34 12 chrX 46337568 46337677 -120312619 - Lx4A LINE L1 -4496 1381 1266 5 938 468 35 0 0 chrX 46337679 46337737 -120312559 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 938 647 227 110 48 chrX 46337737 46337964 -120312332 - Lx4A LINE L1 -6234 852 612 5 938 210 349 48 12 chrX 46339456 46339540 -120310756 + MIR SINE MIR 19 105 -157 5 938 907 205 42 5 chrX 46339703 46339894 -120310402 - B3A SINE B2 0 198 1 5 938 266 340 26 39 chrX 46339973 46340190 -120310106 + MIRc SINE MIR 2 216 -52 5 938 407 78 0 0 chrX 46341233 46341297 -120308999 + Lx2 LINE L1 6934 6997 0 5 938 889 157 29 0 chrX 46341449 46341589 -120308707 + B1_Mur2 SINE Alu 1 144 -5 5 938 975 255 152 37 chrX 46341958 46342320 -120307976 - MTE2b LTR MaLR -9 370 1 5 938 954 293 111 26 chrX 46342621 46343118 -120307178 + Lx8 LINE L1 6935 7473 0 5 938 24 53 0 0 chrX 46343163 46343201 -120307095 + AT_rich Low_complexity Low_complexity 1 38 0 5 938 317 389 75 35 chrX 46343263 46343436 -120306860 + L1MEd LINE L1 1068 1247 -5749 5 938 230 232 58 0 chrX 46343731 46343800 -120306496 + L1MEd LINE L1 1483 1555 -5779 5 938 389 235 71 89 chrX 46343835 46344003 -120306293 - L1M4b LINE L1 -6387 947 783 5 938 401 439 30 4 chrX 46344063 46344326 -120305970 - L1M4b LINE L1 -6790 544 275 5 938 248 154 115 0 chrX 46344524 46344602 -120305694 + Lx8 LINE L1 7358 7444 -29 5 938 726 272 59 5 chrX 46344643 46344846 -120305450 + B3 SINE B2 3 216 0 5 938 374 261 83 50 chrX 46344898 46345019 -120305277 - MLT1F-int LTR MaLR -321 1168 1044 5 938 637 297 6 0 chrX 46345066 46345241 -120305055 - Lx7 LINE L1 -403 7293 7118 5 938 1576 264 16 18 chrX 46345244 46345696 -120304600 + Lx7 LINE L1 6657 7107 -589 5 938 324 226 79 21 chrX 46345703 46345843 -120304453 - L1_Rod LINE L1 -3633 2214 2067 5 938 228 308 110 14 chrX 46345921 46346066 -120304230 - L1M5 LINE L1 -512 5652 5494 5 938 348 24 0 0 chrX 46346799 46346840 -120303456 + (TTA)n Simple_repeat Simple_repeat 2 42 0 5 938 3965 122 16 11 chrX 46346840 46347471 -120302825 - Lx LINE L1 -30 6624 5991 5 938 453 152 30 0 chrX 46347588 46347687 -120302609 - Lx9 LINE L1 0 7644 7543 5 938 658 181 7 0 chrX 46347687 46347831 -120302465 + L1_Rod LINE L1 1227 1371 -4476 5 938 677 248 14 0 chrX 46348175 46348316 -120301980 + RSINE1 SINE B4 3 145 -20 5 938 27 29 0 0 chrX 46348316 46348350 -120301946 + AT_rich Low_complexity Low_complexity 1 34 0 5 938 300 159 0 73 chrX 46348489 46348557 -120301739 + HAL1-3A_ME LINE L1 1973 2035 -823 5 938 189 107 0 0 chrX 46350191 46350219 -120300077 + (TATG)n Simple_repeat Simple_repeat 1 28 0 5 938 345 24 0 0 chrX 46350238 46350280 -120300016 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 938 4815 180 104 8 chrX 46350682 46351736 -120298560 - Lx5 LINE L1 -119 6939 5783 5 938 3071 64 3 0 chrX 46351736 46352124 -120298172 - L1_Mus1 LINE L1 0 6567 6179 5 938 2754 251 33 111 chrX 46352124 46352229 -120298067 - Lx5 LINE L1 -1108 5950 5857 5 938 188 67 0 32 chrX 46352229 46352260 -120298036 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 5 938 2754 150 11 56 chrX 46352260 46352701 -120297595 - Lx5 LINE L1 -1202 5856 5451 5 938 3595 117 9 20 chrX 46352701 46353258 -120297038 - L1_Mus4 LINE L1 -3 6633 6083 5 938 2578 109 2 33 chrX 46353258 46353362 -120296934 - Lx5 LINE L1 -427 5450 5350 5 938 4375 30 24 4 chrX 46353383 46353918 -120296378 - L1Md_F3 LINE L1 0 6584 6039 5 938 3851 47 0 2 chrX 46353918 46354406 -120295890 + L1_Mm LINE L1 5322 5808 -75 5 938 516 110 12 0 chrX 46354395 46354477 -120295819 - Lx5 LINE L1 -515 5362 5280 5 938 321 0 0 0 chrX 46354523 46354561 -120295735 + L1Md_F3 LINE L1 6113 6150 -434 5 938 770 203 101 11 chrX 46354559 46354748 -120295548 - Lx4A LINE L1 -14 7044 6839 5 938 468 0 0 0 chrX 46354804 46354856 -120295440 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 938 730 275 124 70 chrX 46354867 46355236 -120295060 + MLT2B1 LTR ERVL 134 518 -2 5 938 391 256 112 42 chrX 46355761 46355904 -120294392 - MLT1A0 LTR MaLR -2 363 211 5 938 302 309 10 67 chrX 46355935 46356039 -120294257 + MLT1A LTR MaLR 199 296 -78 5 938 185 341 12 12 chrX 46356124 46356207 -120294089 + L2a LINE L2 3344 3426 0 5 938 6184 80 8 2 chrX 46356622 46357461 -120292835 - L1_Mus4 LINE L1 0 6636 5793 5 938 516 324 48 21 chrX 46357938 46358124 -120292172 + Tigger5 DNA MER2_type 24 214 -2192 5 938 243 319 10 31 chrX 46358138 46358235 -120292061 + Tigger5 DNA MER2_type 2309 2403 -3 5 938 615 323 59 70 chrX 46358324 46358597 -120291699 - B4A SINE B4 -20 272 3 5 938 531 319 13 4 chrX 46358975 46359205 -120291091 - CR1_Mam LINE CR1 -423 1781 1550 5 938 225 175 47 16 chrX 46359365 46359429 -120290867 + Charlie4a DNA MER1_type 387 452 -56 5 938 301 325 38 78 chrX 46359489 46359714 -120290582 + MIRc SINE MIR 7 230 -38 5 938 582 270 39 33 chrX 46360186 46360339 -120289957 + MTEb LTR MaLR 121 274 -105 5 938 266 277 0 15 chrX 46360758 46360824 -120289472 - ID4_ SINE ID -16 67 3 5 938 389 244 0 43 chrX 46360836 46360930 -120289366 - ID_B1 SINE B4 -3 221 132 5 938 210 235 39 19 chrX 46360886 46360938 -120289358 - PB1D10 SINE Alu -24 93 41 5 938 207 283 127 42 chrX 46361192 46361310 -120288986 - MIRb SINE MIR -19 249 122 5 938 677 270 7 0 chrX 46361889 46362026 -120288270 - ID_B1 SINE B4 -17 207 70 5 938 1212 73 0 0 chrX 46362142 46362319 -120287977 + (CA)n Simple_repeat Simple_repeat 2 178 0 5 938 685 284 141 20 chrX 46362335 46362631 -120287665 - MLT2D LTR ERVL -86 378 1 5 938 431 311 0 0 chrX 46362701 46362807 -120287489 + PB1D10 SINE Alu 2 107 -10 5 938 21 0 0 0 chrX 46363298 46363319 -120286977 + AT_rich Low_complexity Low_complexity 1 21 0 5 938 441 227 237 13 chrX 46366873 46367025 -120283271 - MIR SINE MIR -41 221 36 5 938 1079 164 38 24 chrX 46367296 46367508 -120282788 + URR1A DNA MER1_type 11 225 -1 5 938 239 246 71 14 chrX 46369044 46369114 -120281182 + MER21B LTR ERV1 1 74 -789 5 938 557 69 48 10 chrX 46369157 46369260 -120281036 + (TCTA)n Simple_repeat Simple_repeat 2 108 0 5 938 1138 95 0 11 chrX 46369280 46369461 -120280835 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 5 938 474 88 0 0 chrX 46369461 46369529 -120280767 + (TCTG)n Simple_repeat Simple_repeat 2 69 0 5 938 991 117 0 11 chrX 46369547 46369729 -120280567 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 5 938 364 117 0 0 chrX 46369729 46369789 -120280507 - Lx4A LINE L1 -3 7055 6996 5 938 572 353 62 62 chrX 46369853 46370052 -120280244 + MER21B LTR ERV1 275 468 -395 5 938 898 179 98 10 chrX 46370052 46370255 -120280041 - URR1B DNA MER1_type -4 221 1 5 938 572 353 62 62 chrX 46370255 46370475 -120279821 + MER21B LTR ERV1 469 693 -170 5 938 1671 203 3 22 chrX 46370806 46371123 -120279173 - Lx4A LINE L1 0 7058 6748 5 938 551 93 12 0 chrX 46371124 46371210 -120279086 + Lx4B LINE L1 6641 6727 -331 5 938 276 50 100 0 chrX 46371600 46371660 -120278636 + (TTTTTG)n Simple_repeat Simple_repeat 2 67 0 5 938 1045 57 57 7 chrX 46371662 46371803 -120278493 - B1_Mus1 SINE Alu 0 148 1 5 938 279 0 0 0 chrX 46371916 46371947 -120278349 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 938 342 0 0 0 chrX 46372343 46372381 -120277915 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 938 530 321 8 0 chrX 46372388 46372522 -120277774 - RSINE1 SINE B4 -16 149 15 5 938 669 271 6 6 chrX 46375231 46375387 -120274909 - ID_B1 SINE B4 -1 223 68 5 938 962 205 236 58 chrX 46375478 46375800 -120274496 + MTD LTR MaLR 41 419 0 5 938 198 0 0 0 chrX 46376012 46376034 -120274262 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 5 938 484 213 0 0 chrX 46376058 46376133 -120274163 - B1_Mus2 SINE Alu -71 76 2 5 938 649 268 49 11 chrX 46377766 46377951 -120272345 - B3A SINE B2 -5 193 2 6 938 243 0 0 0 chrX 46378011 46378038 -120272258 + (TAAAA)n Simple_repeat Simple_repeat 4 30 0 6 938 430 219 0 244 chrX 46379020 46379213 -120271083 - B1_Mur1 SINE Alu -2 147 2 6 938 500 293 78 5 chrX 46379218 46379424 -120270872 + L1MC1 LINE L1 94 314 -6194 6 938 322 177 32 0 chrX 46379445 46379507 -120270789 + L1MC1 LINE L1 377 440 -6068 6 938 7596 60 0 1 chrX 46379527 46380635 -120269661 + L1_Mus1 LINE L1 5462 6567 0 6 938 303 28 0 0 chrX 46380646 46380682 -120269614 + (GAAAA)n Simple_repeat Simple_repeat 4 39 0 6 938 550 238 56 86 chrX 46380682 46380810 -120269486 + L1MC1 LINE L1 454 580 -5928 6 938 1036 161 77 14 chrX 46380810 46381018 -120269278 + URR1A DNA MER1_type 5 225 -1 6 938 550 238 56 86 chrX 46381018 46381123 -120269173 + L1MC1 LINE L1 581 680 -5828 6 938 222 271 0 0 chrX 46381189 46381237 -120269059 + ID_B1 SINE B4 99 146 -78 6 938 514 290 83 5 chrX 46381255 46381652 -120268644 + L1MC1 LINE L1 669 1151 -5357 6 938 875 241 86 20 chrX 46381654 46381957 -120268339 - MLT1A0 LTR MaLR 0 365 7 6 938 924 238 168 31 chrX 46381961 46382582 -120267714 + L1MC1 LINE L1 1148 1853 -4655 6 938 436 222 25 17 chrX 46382604 46382723 -120267573 + L1MC1 LINE L1 1924 2043 -4465 6 938 323 263 152 0 chrX 46382734 46382932 -120267364 + L1MC1 LINE L1 2141 2368 -4140 6 938 412 298 0 0 chrX 46382963 46383057 -120267239 + B1F SINE Alu 7 100 -49 6 938 248 215 89 0 chrX 46383400 46383479 -120266817 + L1MC1 LINE L1 2386 2471 -3931 6 938 243 248 50 0 chrX 46383566 46383667 -120266629 + L1MC1 LINE L1 3108 3213 -3108 6 938 1142 95 0 0 chrX 46383671 46383818 -120266478 + B1_Mus2 SINE Alu 1 147 0 6 938 540 81 0 0 chrX 46383818 46383892 -120266404 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 6 938 1654 288 52 36 chrX 46383950 46384668 -120265628 + L1MC1 LINE L1 5750 6478 -30 6 938 207 274 0 0 chrX 46384808 46384859 -120265437 - L2b LINE L2 -1 3374 3324 6 938 558 343 14 0 chrX 46385237 46385450 -120264846 + MTE-int LTR MaLR 925 1140 -440 6 938 4330 48 0 9 chrX 46385689 46386230 -120264066 + L1Md_F2 LINE L1 6045 6580 -2 6 938 636 255 14 0 chrX 46386284 46386425 -120263871 - ID_B1 SINE B4 -2 222 80 6 938 248 377 28 78 chrX 46388983 46389002 -120261294 + B4 SINE B4 81 214 -78 6 938 520 258 8 2 chrX 46389002 46389124 -120261172 + B1F SINE Alu 15 137 -12 6 938 636 273 105 20 chrX 46389248 46389495 -120260801 + MLT1C LTR MaLR 61 328 -139 6 938 744 269 179 88 chrX 46389503 46390016 -120260280 - RMER4B LTR ERVK -6 579 20 6 938 355 325 45 45 chrX 46390005 46390182 -120260114 + MLT1C LTR MaLR 291 467 0 6 938 341 240 131 10 chrX 46391097 46391295 -120259001 - L1MA9 LINE L1 -6 6306 6085 6 938 520 267 47 54 chrX 46392995 46393177 -120257119 - B4A SINE B4 -111 181 2 6 938 415 327 54 54 chrX 46394228 46394561 -120255735 + L1MEf LINE L1 43 375 -5719 6 938 261 128 0 0 chrX 46394619 46394666 -120255630 + (CATA)n Simple_repeat Simple_repeat 4 50 0 6 938 292 297 27 0 chrX 46394821 46394969 -120255327 + L1MEf LINE L1 717 868 -5226 6 938 653 112 0 9 chrX 46395012 46395029 -120255267 + (TTCC)n Simple_repeat Simple_repeat 1 17 0 6 938 1401 56 0 0 chrX 46395029 46395208 -120255088 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 6 938 653 112 0 9 chrX 46395208 46395298 -120254998 + (TTCC)n Simple_repeat Simple_repeat 4 92 0 6 938 293 315 107 7 chrX 46395428 46395578 -120254718 - LTR41 LTR ERVL -11 757 593 6 938 248 259 0 0 chrX 46395608 46395666 -120254630 + (CATATA)n Simple_repeat Simple_repeat 5 62 0 6 938 2008 145 89 106 chrX 46395893 46396671 -120253625 - RMER6C LTR ERVK -36 720 1 6 938 509 312 181 40 chrX 46396793 46397268 -120253028 + L1MEf LINE L1 1045 1586 -4614 6 938 702 212 201 55 chrX 46397322 46397576 -120252720 + B4A SINE B4 1 291 -1 6 938 1048 87 12 6 chrX 46397821 46397983 -120252313 + (TTTCC)n Simple_repeat Simple_repeat 2 164 0 6 938 836 188 0 0 chrX 46397985 46398118 -120252178 - B1_Mus2 SINE Alu -13 134 2 6 938 2795 46 3 3 chrX 46398724 46399075 -120251221 - L1_Mus2 LINE L1 0 6566 6216 6 939 238 53 88 0 chrX 46400119 46400176 -120250120 + (CAA)n Simple_repeat Simple_repeat 2 63 0 6 939 3327 196 54 82 chrX 46401849 46401867 -120248429 + RLTR21 LTR ERVK 697 714 -858 6 939 3298 63 7 0 chrX 46401867 46402293 -120248003 - L1Md_F2 LINE L1 0 6582 6154 6 939 3327 196 54 82 chrX 46402293 46402314 -120247982 + RLTR21 LTR ERVK 715 735 -837 6 939 216 0 0 0 chrX 46402314 46402338 -120247958 + (TAA)n Simple_repeat Simple_repeat 2 25 0 6 939 3327 196 54 82 chrX 46402338 46402746 -120247550 + RLTR21 LTR ERVK 736 1172 -400 6 939 407 65 32 0 chrX 46402746 46402808 -120247488 + (TATG)n Simple_repeat Simple_repeat 1 64 0 6 939 3327 196 54 82 chrX 46402808 46403259 -120247037 + RLTR21 LTR ERVK 1173 1571 -1 6 939 256 280 40 0 chrX 46403988 46404063 -120246233 + ID4_ SINE ID 5 82 -1 6 939 279 0 0 0 chrX 46404189 46404220 -120246076 + (CATA)n Simple_repeat Simple_repeat 2 32 0 6 939 724 220 46 29 chrX 46405177 46405350 -120244946 - MTEa LTR MaLR 0 379 204 6 939 369 0 0 0 chrX 46405552 46405593 -120244703 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 939 1155 151 126 0 chrX 46406544 46406743 -120243553 + URR1A DNA MER1_type 3 226 0 6 939 315 0 0 0 chrX 46407403 46407438 -120242858 + (TC)n Simple_repeat Simple_repeat 1 35 0 6 939 360 43 0 0 chrX 46407438 46407483 -120242813 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 939 989 28 88 27 chrX 46408749 46408897 -120241399 + L1Md_F2 LINE L1 6424 6580 -2 6 939 495 255 0 9 chrX 46408956 46409067 -120241229 - PB1D7 SINE Alu -1 119 10 6 939 268 307 0 10 chrX 46409928 46410030 -120240266 + RLTR42-int LTR ERVK 1300 1400 -4122 6 939 324 0 0 0 chrX 46410200 46410236 -120240060 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 6 939 252 274 57 170 chrX 46410847 46410988 -120239308 + PB1 SINE Alu 1 125 -2 6 939 417 20 0 0 chrX 46411513 46411563 -120238733 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 939 255 222 24 12 chrX 46411829 46411911 -120238385 + (TA)n Simple_repeat Simple_repeat 2 84 0 6 939 502 330 150 4 chrX 46411915 46412381 -120237915 + L1MEc LINE L1 116 649 -5751 6 939 429 258 11 0 chrX 46412387 46412480 -120237816 - PB1D10 SINE Alu -1 116 23 6 939 374 246 69 0 chrX 46412482 46412612 -120237684 + L1MEc LINE L1 1712 1850 -4550 6 939 311 372 67 27 chrX 46413505 46413729 -120236567 + L2 LINE L2 2649 2881 -538 6 939 1452 44 0 0 chrX 46413821 46414001 -120236295 + (TTC)n Simple_repeat Simple_repeat 1 180 0 6 939 348 161 0 0 chrX 46414001 46414063 -120236233 + CT-rich Low_complexity Low_complexity 3 64 0 6 939 1705 188 29 57 chrX 46414104 46414488 -120235808 - ORR1D1 LTR MaLR -1 373 1 6 939 688 247 20 20 chrX 46414549 46414698 -120235598 + RSINE1 SINE B4 17 165 0 6 939 192 179 0 0 chrX 46414933 46414972 -120235324 + (TATATG)n Simple_repeat Simple_repeat 6 44 0 6 939 217 336 63 9 chrX 46417013 46417124 -120233172 - MER5B DNA MER1_type 0 178 62 6 939 344 312 83 3 chrX 46417255 46417419 -120232877 + MIRc SINE MIR 30 205 -63 6 939 190 179 0 0 chrX 46417500 46417528 -120232768 - MIR SINE MIR -152 56 29 6 939 185 360 11 23 chrX 46419234 46419322 -120230974 - MIRb SINE MIR -145 123 37 6 939 268 0 0 0 chrX 46419574 46419609 -120230687 - tRNA-Met-i tRNA tRNA -40 35 1 6 939 349 278 11 0 chrX 46419613 46419703 -120230593 - MIR SINE MIR -65 143 53 6 939 186 370 108 17 chrX 46419711 46419887 -120230409 - L2 LINE L2 -1372 2047 1856 6 939 603 0 0 0 chrX 46419895 46419962 -120230334 + (TC)n Simple_repeat Simple_repeat 2 68 0 6 939 779 248 72 32 chrX 46419976 46420197 -120230099 - B4A SINE B4 -48 244 15 6 939 269 253 71 12 chrX 46420313 46420397 -120229899 - L2 LINE L2 -1313 2106 2018 6 939 931 168 65 103 chrX 46420617 46420849 -120229447 + URR1B DNA MER1_type 3 225 0 6 939 190 175 24 24 chrX 46420969 46421010 -120229286 - L3 LINE CR1 -3624 865 825 6 939 198 103 0 0 chrX 46422767 46422796 -120227500 + (CAA)n Simple_repeat Simple_repeat 1 29 0 6 939 349 331 32 0 chrX 46423418 46423542 -120226754 + MIRb SINE MIR 125 252 -16 6 939 875 384 72 15 chrX 46423760 46424164 -120226132 - FordPrefect_a DNA Tip100 -9 499 73 6 939 371 331 27 40 chrX 46424184 46424332 -120225964 - FordPrefect_a DNA Tip100 -357 151 6 6 939 615 124 45 23 chrX 46424843 46424975 -120225321 - Lx3_Mus LINE L1 -8 7001 6867 6 939 2136 44 0 0 chrX 46424975 46425245 -120225051 + Lx3_Mus LINE L1 6375 6644 -365 6 939 249 57 0 0 chrX 46425412 46425447 -120224849 + (T)n Simple_repeat Simple_repeat 1 35 0 6 939 4396 128 107 38 chrX 46427638 46428533 -120221763 + RMER17B LTR ERVK 2 958 0 6 939 462 292 22 93 chrX 46428535 46428803 -120221493 - Charlie18a DNA MER1_type -73 269 21 6 939 346 340 14 69 chrX 46428919 46429162 -120221134 + B4A SINE B4 2 292 0 6 939 228 367 117 21 chrX 46429542 46429876 -120220420 + L2c LINE L2 3021 3386 -1 6 939 241 354 10 0 chrX 46429994 46430093 -120220203 + L2b LINE L2 3276 3375 0 6 939 342 0 0 0 chrX 46431649 46431687 -120218609 + (A)n Simple_repeat Simple_repeat 1 38 0 6 939 282 306 45 34 chrX 46432076 46432164 -120218132 + MTEa LTR MaLR 215 303 -76 6 939 287 406 75 53 chrX 46432156 46432517 -120217779 - MLT2B2 LTR ERVL -124 391 23 6 939 193 246 32 32 chrX 46432800 46432863 -120217433 - MER5A DNA MER1_type -80 109 47 6 939 433 331 0 45 chrX 46433127 46433282 -120217014 - RSINE1 SINE B4 -16 149 2 6 939 268 242 0 35 chrX 46434424 46434517 -120215779 - L2c LINE L2 -50 3325 3240 6 939 208 361 83 12 chrX 46434573 46434657 -120215639 - MIRb SINE MIR -17 251 162 6 939 193 303 40 109 chrX 46436292 46436566 -120213730 - L2a LINE L2 -98 3328 3074 6 939 578 239 0 0 chrX 46436701 46436818 -120213478 - PB1D9 SINE Alu -2 118 2 6 939 386 274 8 57 chrX 46437451 46437575 -120212721 + B3A SINE B2 1 118 -80 6 939 362 329 51 34 chrX 46437575 46437627 -120212669 + B4A SINE B4 1 179 -113 6 939 270 0 0 0 chrX 46437627 46437657 -120212639 + (A)n Simple_repeat Simple_repeat 1 30 0 6 939 192 234 0 0 chrX 46437814 46437861 -120212435 + (CATA)n Simple_repeat Simple_repeat 2 48 0 6 939 409 285 216 5 chrX 46438700 46438894 -120211402 - MIR SINE MIR -25 237 3 6 939 422 295 32 55 chrX 46438967 46439186 -120211110 + MER20 DNA MER1_type 2 215 -4 6 939 180 0 0 0 chrX 46439229 46439249 -120211047 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 939 230 261 40 68 chrX 46439438 46439512 -120210784 - RSINE1 SINE B4 -83 82 11 7 939 182 267 0 43 chrX 46439902 46439949 -120210347 + L2a LINE L2 3367 3411 -15 7 939 686 307 23 5 chrX 46440748 46440964 -120209332 + Lx8 LINE L1 7111 7330 -143 7 939 270 0 0 0 chrX 46441381 46441411 -120208885 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 939 413 322 67 91 chrX 46441459 46441756 -120208540 - B4A SINE B4 -2 290 1 7 939 380 278 38 48 chrX 46441867 46442075 -120208221 - MIR SINE MIR -32 236 15 7 939 495 0 0 0 chrX 46442974 46443029 -120207267 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 7 939 219 330 49 33 chrX 46443339 46443461 -120206835 + MIR SINE MIR 80 203 -59 7 939 2519 288 101 15 chrX 46444115 46444987 -120205309 + Lx8 LINE L1 6361 7290 -183 7 939 215 61 30 0 chrX 46444987 46445020 -120205276 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 939 2519 288 101 15 chrX 46445020 46445172 -120205124 + Lx8 LINE L1 7291 7472 -1 7 939 389 304 102 11 chrX 46445224 46445410 -120204886 + MIR SINE MIR 5 207 -55 7 939 24 53 0 0 chrX 46445733 46445771 -120204525 + AT_rich Low_complexity Low_complexity 1 38 0 7 939 222 37 0 0 chrX 46445802 46445829 -120204467 + (TTA)n Simple_repeat Simple_repeat 3 29 0 7 939 288 211 0 0 chrX 46446563 46446634 -120203662 + (TG)n Simple_repeat Simple_repeat 2 72 0 7 939 312 299 10 40 chrX 46447515 46447616 -120202680 - L1ME3B LINE L1 -167 6073 5976 7 939 2026 218 7 19 chrX 46447701 46448117 -120202179 - MTD LTR MaLR -8 411 1 7 939 330 335 42 61 chrX 46448416 46448629 -120201667 + MIRc SINE MIR 46 254 -14 7 939 236 269 0 0 chrX 46449449 46449501 -120200795 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 7 939 1104 36 0 0 chrX 46451989 46452126 -120198170 - L1_Mus1 LINE L1 0 6567 6431 7 939 186 43 0 0 chrX 46452573 46452596 -120197700 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 7 939 362 217 65 0 chrX 46452711 46452803 -120197493 + PB1D10 SINE Alu 2 99 -18 7 939 234 342 0 26 chrX 46456732 46456810 -120193486 + MamRep38 DNA hAT 173 248 -47 7 939 649 243 77 22 chrX 46456818 46456999 -120193297 - B3A SINE B2 0 198 8 7 939 654 249 6 11 chrX 46456999 46457174 -120193122 + Lx8 LINE L1 6297 6470 -1003 7 939 1162 178 5 5 chrX 46457200 46457409 -120192887 + BGLII_B LTR ERVK 233 441 0 7 939 1399 277 39 40 chrX 46457409 46457954 -120192342 + Lx9 LINE L1 6674 7217 -427 7 939 297 0 0 0 chrX 46457967 46458000 -120192296 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 939 359 339 89 17 chrX 46459245 46459425 -120190871 - MIR SINE MIR -9 253 61 7 939 372 22 0 0 chrX 46459536 46459581 -120190715 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 939 225 0 0 0 chrX 46459581 46459605 -120190691 + (GA)n Simple_repeat Simple_repeat 1 25 0 7 939 486 49 0 0 chrX 46459655 46459716 -120190580 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 7 939 342 221 81 11 chrX 46459725 46459812 -120190484 - MIR SINE MIR -150 112 20 7 939 562 311 50 66 chrX 46459813 46460090 -120190206 + B4A SINE B4 3 292 0 7 939 1462 329 91 32 chrX 46460452 46461159 -120189137 + LTR41 LTR ERVL 18 765 -3 7 939 491 0 17 0 chrX 46461408 46461467 -120188829 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 7 939 201 39 0 0 chrX 46464404 46464430 -120185866 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 939 306 278 209 0 chrX 46464559 46464674 -120185622 + MTEa LTR MaLR 7 145 -234 7 939 266 170 85 0 chrX 46464734 46464781 -120185515 - MT2A LTR ERVL -94 439 389 7 939 885 117 55 0 chrX 46464934 46465079 -120185217 - URR1A DNA MER1_type 0 226 74 7 939 364 328 31 79 chrX 46465352 46465559 -120184737 + MIR3 SINE MIR 11 208 0 7 939 384 299 67 20 chrX 46466081 46466231 -120184065 - MIRc SINE MIR -4 264 108 7 939 184 337 10 71 chrX 46466963 46467062 -120183234 + MIR SINE MIR 13 105 -157 7 939 1817 122 19 96 chrX 46467068 46467452 -120182844 - ORR1A4 LTR MaLR -8 386 1 7 939 1401 203 59 0 chrX 46468460 46468765 -120181531 + Lx6 LINE L1 6277 6599 -861 7 939 1536 191 14 94 chrX 46468765 46469136 -120181160 + ORR1C1 LTR MaLR 8 348 -30 7 939 1178 55 7 0 chrX 46469170 46469315 -120180981 - B1_Mus1 SINE Alu 0 148 3 7 939 2766 201 114 99 chrX 46469358 46470264 -120180032 + Lx7 LINE L1 6632 7550 -146 7 939 847 286 42 12 chrX 46470322 46470563 -120179733 - Lx6 LINE L1 -5 7455 7208 7 939 553 172 112 0 chrX 46470561 46470695 -120179601 + Lx6 LINE L1 7307 7455 -5 7 939 28 0 0 0 chrX 46471279 46471307 -120178989 + AT_rich Low_complexity Low_complexity 1 28 0 7 939 272 305 16 57 chrX 46471332 46471459 -120178837 - MIRc SINE MIR -43 165 42 7 939 280 352 50 7 chrX 46471824 46471964 -120178332 + L3 LINE CR1 3769 3914 -575 7 939 258 355 77 18 chrX 46472341 46472510 -120177786 + L3 LINE CR1 4034 4212 -277 7 939 1916 196 54 22 chrX 46472569 46472975 -120177321 - MTD LTR MaLR 0 419 1 7 939 21 0 0 0 chrX 46473690 46473711 -120176585 + AT_rich Low_complexity Low_complexity 1 21 0 7 939 181 342 52 17 chrX 46473747 46473863 -120176433 - MIR SINE MIR -64 198 79 7 939 439 295 148 36 chrX 46474357 46474607 -120175689 - Lx8 LINE L1 -986 6487 6210 7 939 717 301 85 32 chrX 46474611 46475064 -120175232 + Lx7 LINE L1 6516 7021 -452 7 939 251 194 174 0 chrX 46475140 46475238 -120175058 + Lx8 LINE L1 7358 7472 -1 7 939 813 117 148 0 chrX 46476076 46476204 -120174092 + B1_Mm SINE Alu 1 147 0 7 939 225 0 0 0 chrX 46476204 46476229 -120174067 + (A)n Simple_repeat Simple_repeat 1 25 0 7 939 2348 118 16 22 chrX 46476367 46476759 -120173537 + Lx LINE L1 6189 6582 0 7 939 600 105 13 47 chrX 46476768 46476918 -120173378 + GA-rich Low_complexity Low_complexity 5 149 0 7 939 550 273 41 7 chrX 46477014 46477242 -120173054 + L1MA4 LINE L1 5703 5915 -385 7 939 533 42 14 0 chrX 46477280 46477352 -120172944 + (CA)n Simple_repeat Simple_repeat 2 74 0 7 939 23 0 0 0 chrX 46479239 46479262 -120171034 + AT_rich Low_complexity Low_complexity 1 23 0 7 939 1570 265 25 35 chrX 46480132 46480737 -120169559 - L1MB5 LINE L1 -30 6144 5546 7 939 821 89 0 16 chrX 46480741 46480866 -120169430 + L1_Mus2 LINE L1 6442 6564 -2 7 939 24 0 0 0 chrX 46480870 46480894 -120169402 + AT_rich Low_complexity Low_complexity 1 24 0 7 939 276 291 128 38 chrX 46480958 46481165 -120169131 - L1MB5 LINE L1 -635 5539 5317 7 939 2320 134 53 24 chrX 46481980 46482393 -120167903 - Lx LINE L1 0 6654 6230 7 939 1826 242 106 2 chrX 46482686 46482732 -120167564 - MT2A LTR ERVL -2 531 445 7 939 537 16 0 0 chrX 46482732 46482794 -120167502 + (TA)n Simple_repeat Simple_repeat 2 63 0 7 939 1826 242 106 2 chrX 46482794 46483228 -120167068 - MT2A LTR ERVL -89 444 2 7 939 225 268 0 0 chrX 46483350 46483406 -120166890 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 7 939 248 350 41 8 chrX 46484088 46484209 -120166087 + MIR SINE MIR 98 222 -40 7 939 305 245 9 153 chrX 46484414 46484525 -120165771 + MT2B2 LTR ERVL 156 250 -334 7 939 598 170 18 36 chrX 46484440 46484550 -120165746 + PB1D10 SINE Alu 10 117 0 7 939 342 0 0 0 chrX 46484996 46485034 -120165262 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 939 216 255 0 21 chrX 46485090 46485138 -120165158 + RSINE1 SINE B4 4 50 -115 7 939 296 48 47 31 chrX 46485143 46485207 -120165089 + (CAAAAA)n Simple_repeat Simple_repeat 2 66 0 7 939 421 256 11 0 chrX 46485300 46485390 -120164906 + RSINE1 SINE B4 56 146 -19 7 939 675 322 34 61 chrX 46485624 46485951 -120164345 + RLTR18 LTR ERVK 5 322 -294 7 939 3776 196 65 2 chrX 46486107 46486934 -120163362 - Lx5 LINE L1 0 7050 6172 7 939 511 308 25 35 chrX 46486954 46487156 -120163140 + RLTR18 LTR ERVK 290 489 -23 7 939 484 351 49 28 chrX 46487211 46487495 -120162801 + B4 SINE B4 3 292 0 7 939 426 20 0 0 chrX 46487511 46487562 -120162734 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 939 1420 121 0 5 chrX 46488646 46488870 -120161426 + Lx4A LINE L1 5641 5863 -1195 7 939 1363 154 20 79 chrX 46488861 46489164 -120161132 + Lx4A LINE L1 6456 6740 -318 7 939 845 183 65 0 chrX 46489156 46489325 -120160971 + Lx5 LINE L1 6285 6464 -586 7 939 290 256 85 0 chrX 46489422 46489551 -120160745 - L1MDa LINE L1 -794 5839 5700 7 939 729 158 0 29 chrX 46489576 46489746 -120160550 + CT-rich Low_complexity Low_complexity 3 167 0 7 939 296 278 139 0 chrX 46489779 46489923 -120160373 - L1MDa LINE L1 -868 5669 5506 7 939 1358 316 68 32 chrX 46489950 46490103 -120160193 - L1MDa LINE L1 -4902 1731 1561 7 939 2704 54 99 0 chrX 46490103 46490456 -120159840 + RLTR10 LTR ERVK 1 388 -2 7 939 1358 316 68 32 chrX 46490456 46491278 -120159018 - L1MDa LINE L1 -5073 1560 721 7 939 3595 183 155 4 chrX 46491308 46492140 -120158156 - L1_Mur2 LINE L1 -171 5706 4749 7 939 3595 105 2 7 chrX 46492116 46492703 -120157593 - MusHAL1 LINE L1 -530 2182 1599 7 939 14163 68 28 1 chrX 46492711 46494716 -120155580 + L1Md_F2 LINE L1 3527 5586 -297 7 939 7593 75 0 5 chrX 46494716 46495717 -120154579 + L1Md_F2 LINE L1 5587 6582 0 7 939 1105 67 0 0 chrX 46495817 46495966 -120154330 + L1Md_F2 LINE L1 6430 6578 -4 7 939 21 82 0 0 chrX 46495977 46496026 -120154270 + AT_rich Low_complexity Low_complexity 1 49 0 7 939 204 40 0 0 chrX 46497604 46497629 -120152667 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 939 457 278 0 9 chrX 46497641 46497757 -120152539 - MER105 DNA DNA -3 201 87 7 939 256 304 30 0 chrX 46497894 46498029 -120152267 - L1M5 LINE L1 -743 5430 5292 7 939 21 57 0 0 chrX 46498029 46498064 -120152232 + AT_rich Low_complexity Low_complexity 1 35 0 7 939 540 306 51 11 chrX 46498082 46498257 -120152039 - B3A SINE B2 -16 182 1 7 939 252 0 0 0 chrX 46498413 46498441 -120151855 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 939 605 295 0 0 chrX 46498443 46498592 -120151704 - RSINE1 SINE B4 -13 152 4 7 939 180 0 0 0 chrX 46499522 46499542 -120150754 + (T)n Simple_repeat Simple_repeat 1 20 0 7 939 1249 34 0 13 chrX 46499542 46499691 -120150605 - B1_Mm SINE Alu 0 147 1 7 939 547 184 0 10 chrX 46499737 46499836 -120150460 + Lx4B LINE L1 6261 6358 -700 8 939 688 61 10 0 chrX 46499853 46499952 -120150344 - L1_Mus2 LINE L1 -456 6111 6012 8 939 353 77 0 0 chrX 46499948 46500000 -120150296 + L1_Mus2 LINE L1 6234 6285 -281 8 939 1932 71 48 4 chrX 46500000 46500270 -120150026 + L1_Mus1 LINE L1 6286 6567 0 1 939 2591 213 95 7 chrX 46500258 46500836 -120149460 + Lx2B LINE L1 6362 6990 -10 2 939 181 309 0 0 chrX 46502233 46502275 -120148021 + L2a LINE L2 3287 3328 -59 3 939 21 0 0 0 chrX 46502510 46502531 -120147765 + AT_rich Low_complexity Low_complexity 1 21 0 4 939 1925 269 43 48 chrX 46503286 46503368 -120146928 + L1_Rod LINE L1 3798 3877 -1970 5 939 372 43 0 0 chrX 46503368 46503414 -120146882 + (GAAAA)n Simple_repeat Simple_repeat 5 50 0 6 939 1925 269 43 48 chrX 46503414 46504163 -120146133 + L1_Rod LINE L1 3878 4624 -1223 5 939 7599 78 14 7 chrX 46504261 46506007 -120144289 - L1VL2 LINE L1 -1586 2029 268 7 939 844 271 104 27 chrX 46506222 46506461 -120143835 - MER2 DNA MER2_type -3 342 82 8 939 329 284 0 51 chrX 46506461 46506539 -120143757 - ID4_ SINE ID -9 74 1 9 939 844 271 104 27 chrX 46506539 46506598 -120143698 - MER2 DNA MER2_type -264 81 21 8 939 185 340 29 58 chrX 46507554 46507657 -120142639 + L2a LINE L2 3312 3411 -15 3 939 291 300 65 57 chrX 46507691 46507874 -120142422 + L2a LINE L2 3216 3421 -5 1 939 2706 103 103 0 chrX 46507963 46508380 -120141916 - Lx LINE L1 -6 6648 6189 1 939 263 220 16 0 chrX 46508437 46508499 -120141797 - MIR SINE MIR -113 155 87 1 939 281 393 39 39 chrX 46508560 46508740 -120141556 + MIRb SINE MIR 73 252 -16 1 939 259 278 34 25 chrX 46509353 46509471 -120140825 - Lx8 LINE L1 -2 7471 7353 1 939 529 316 56 46 chrX 46509548 46509744 -120140552 - B3A SINE B2 0 198 1 1 939 301 347 8 41 chrX 46509766 46509889 -120140407 - Lx8 LINE L1 -140 7333 7215 1 939 891 306 59 18 chrX 46509923 46510315 -120139981 - Lx8 LINE L1 -325 7148 6741 1 939 442 323 14 68 chrX 46510399 46510656 -120139640 - Lx8 LINE L1 -1109 6364 6118 1 939 417 240 0 0 chrX 46511165 46511240 -120139056 - RSINE1 SINE B4 -89 76 2 1 939 243 0 0 0 chrX 46511978 46512005 -120138291 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 939 457 71 23 23 chrX 46512380 46512467 -120137829 + (TCTG)n Simple_repeat Simple_repeat 2 88 0 1 939 266 268 134 0 chrX 46512515 46512612 -120137684 - Lx9 LINE L1 -737 6907 6798 1 939 1346 263 92 57 chrX 46512619 46513264 -120137032 + Lx9 LINE L1 6934 7600 -44 1 939 249 319 65 21 chrX 46513750 46513843 -120136453 + MIR3 SINE MIR 76 172 -36 2 939 1267 253 114 29 chrX 46514755 46515141 -120135155 + MTD LTR MaLR 1 419 0 2 939 591 15 0 0 chrX 46515384 46515452 -120134844 + (TC)n Simple_repeat Simple_repeat 1 68 0 2 939 287 329 0 0 chrX 46515501 46515580 -120134716 - BC1_Mm scRNA scRNA -56 96 18 2 939 6876 44 16 0 chrX 46515779 46516625 -120133671 + L1Md_F2 LINE L1 5723 6582 0 2 939 193 327 167 9 chrX 46517542 46517650 -120132646 + MIR SINE MIR 5 129 -133 2 939 781 274 117 67 chrX 46519347 46519722 -120130574 + MamRep434 DNA TcMar 2 395 -31 2 939 354 305 153 91 chrX 46519766 46520263 -120130033 + Tigger15a DNA TcMar 39 566 -149 2 939 497 208 38 6 chrX 46520533 46520693 -120129603 + GA-rich Low_complexity Low_complexity 3 167 0 2 939 198 392 37 37 chrX 46521524 46521659 -120128637 + L2c LINE L2 3103 3237 -150 2 939 222 37 0 0 chrX 46522328 46522355 -120127941 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 939 21 0 0 0 chrX 46522359 46522380 -120127916 + AT_rich Low_complexity Low_complexity 1 21 0 3 939 222 287 161 0 chrX 46523326 46523413 -120126883 + MIRc SINE MIR 114 214 -54 3 939 278 207 0 24 chrX 46524007 46524091 -120126205 + (TATG)n Simple_repeat Simple_repeat 2 83 0 3 939 2506 93 11 0 chrX 46524442 46524798 -120125498 - Lx3_Mus LINE L1 0 7009 6650 3 939 4189 99 18 0 chrX 46524797 46525401 -120124895 - L1_Mus3 LINE L1 0 6638 6024 3 939 6690 64 126 7 chrX 46525401 46526976 -120123320 - Lx3_Mus LINE L1 -350 6659 4985 3 939 298 306 51 101 chrX 46528224 46528362 -120121934 - B1F1 SINE Alu -17 132 2 3 939 493 226 58 0 chrX 46528382 46528519 -120121777 - Lx9 LINE L1 -9 7635 7491 3 939 275 235 73 29 chrX 46529011 46529118 -120121178 + B3A SINE B2 2 112 -104 3 939 3075 57 3 0 chrX 46529495 46529882 -120120414 - L1Md_F2 LINE L1 -13 6569 6182 3 117 6680 39 0 1 chrX 46529882 46530764 -120119532 + L1Md_F2 LINE L1 5064 5943 -639 4 940 1127 233 128 44 chrX 46530916 46531369 -120118927 - Lx7 LINE L1 0 7696 7206 4 940 636 246 0 0 chrX 46531369 46531544 -120118752 + CT-rich Low_complexity Low_complexity 1 175 0 4 940 269 330 71 9 chrX 46532473 46532586 -120117710 - Charlie5 DNA MER1_type -2504 120 1 4 940 22 0 0 0 chrX 46532790 46532812 -120117484 + AT_rich Low_complexity Low_complexity 1 22 0 4 940 728 248 298 23 chrX 46532812 46533106 -120117190 - MTE2b LTR MaLR -2 377 3 4 940 1388 300 33 3 chrX 46533160 46533521 -120116775 + MTEa LTR MaLR 3 374 -5 4 940 244 397 64 10 chrX 46535936 46536176 -120114120 + L2c LINE L2 2917 3171 -216 4 940 522 259 21 41 chrX 46536566 46536711 -120113585 + RSINE1 SINE B4 5 146 -19 4 940 420 20 0 0 chrX 46538376 46538425 -120111871 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 940 270 0 0 0 chrX 46540215 46540245 -120110051 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 940 386 324 18 0 chrX 46540302 46540413 -120109883 - Lx8 LINE L1 -208 7265 7153 5 940 4904 42 0 3 chrX 46540805 46541398 -120108898 - L1Md_F2 LINE L1 -1 6581 5991 5 940 2643 29 0 0 chrX 46541399 46541710 -120108586 + L1Md_F2 LINE L1 5703 6013 -569 5 940 237 208 0 0 chrX 46542744 46542792 -120107504 - B3 SINE B2 -6 210 163 5 940 1099 300 73 47 chrX 46543261 46544005 -120106291 + L1M2 LINE L1 4626 5388 -755 5 940 588 236 79 0 chrX 46544163 46544290 -120106006 - B1_Mur2 SINE Alu -7 142 6 5 940 638 338 91 5 chrX 46544303 46544511 -120105785 - B4A SINE B4 -66 226 1 5 940 504 48 0 0 chrX 46544643 46544706 -120105590 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 940 279 133 0 0 chrX 46545276 46545321 -120104975 + (TATG)n Simple_repeat Simple_repeat 4 48 0 5 940 643 278 122 50 chrX 46546682 46546708 -120103588 + L1M3e LINE L1 20 40 -6990 5 940 2004 121 12 64 chrX 46546708 46547053 -120103243 + ORR1A2 LTR MaLR 1 327 0 6 940 643 278 122 50 chrX 46547053 46547190 -120103106 + L1M3e LINE L1 41 190 -6840 5 940 1602 43 0 0 chrX 46547190 46547378 -120102918 - B2_Mm1a SINE B2 -4 189 2 6 940 643 278 122 50 chrX 46547378 46547516 -120102780 + L1M3e LINE L1 191 343 -6687 5 940 285 256 308 33 chrX 46547521 46547703 -120102593 + L1M3e LINE L1 570 801 -6229 5 940 1360 182 4 4 chrX 46547746 46547988 -120102308 + Lx9 LINE L1 6669 6910 -734 6 940 502 309 0 0 chrX 46548133 46548259 -120102037 + Lx8 LINE L1 6640 6765 -708 6 940 2150 249 122 13 chrX 46548294 46549115 -120101181 + L1MA8 LINE L1 5382 6291 0 6 940 286 220 220 0 chrX 46549743 46549843 -120100453 + Lx9 LINE L1 7038 7159 -485 6 940 370 205 8 45 chrX 46549886 46550019 -120100277 + Lx9 LINE L1 7516 7643 -1 6 940 3608 73 37 21 chrX 46550409 46550926 -120099370 + L1Md_F2 LINE L1 6046 6570 -12 6 940 452 355 0 0 chrX 46551230 46551368 -120098928 + RSINE1 SINE B4 15 152 -13 6 940 414 352 122 24 chrX 46551771 46552271 -120098025 + L1ME3B LINE L1 5337 5885 -355 6 940 4002 88 104 9 chrX 46552271 46552927 -120097369 - MusHAL1 LINE L1 -1225 1487 770 6 940 3702 70 6 6 chrX 46552927 46553426 -120096870 + Lx3_Mus LINE L1 6511 7009 0 6 940 11480 133 3 18 chrX 46553440 46553838 -120096458 + L1_Mm LINE L1 3812 4209 -1674 7 940 1998 85 11 0 chrX 46553838 46554119 -120096177 + L1_Mus3 LINE L1 6352 6635 -3 7 940 11480 133 3 18 chrX 46554119 46554561 -120095735 + L1_Mm LINE L1 4210 4637 -1246 7 940 255 79 0 0 chrX 46554561 46554599 -120095697 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 7 940 11480 133 3 18 chrX 46554599 46555674 -120094622 + L1_Mm LINE L1 4638 5699 -184 7 940 5292 96 29 3 chrX 46555674 46556437 -120093859 + L1_Mus4 LINE L1 5848 6630 -6 7 940 308 206 136 43 chrX 46556555 46556717 -120093579 + L1_Mus1 LINE L1 511 687 -5929 7 940 5904 117 3 3 chrX 46556724 46557704 -120092592 + L1_Mus1 LINE L1 3009 3988 -1895 7 940 18207 158 86 1 chrX 46557696 46561308 -120088988 + L1_Mur1 LINE L1 1672 5588 -298 7 940 8661 22 0 0 chrX 46561309 46562305 -120087991 + L1Md_A LINE L1 5587 6582 0 7 940 1288 77 0 0 chrX 46562306 46562487 -120087809 + L1_Mm LINE L1 3717 3897 -1986 7 940 5411 62 27 0 chrX 46562487 46562780 -120087516 + RLTR13B1 LTR ERVK 163 461 -432 7 940 342 0 0 0 chrX 46562780 46562818 -120087478 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 940 5411 62 27 0 chrX 46562818 46563236 -120087060 + RLTR13B1 LTR ERVK 462 891 -2 7 940 7755 57 0 1 chrX 46563236 46564388 -120085908 + L1_Mus1 LINE L1 5417 6567 0 7 940 247 325 12 0 chrX 46564592 46564672 -120085624 + ID4_ SINE ID 2 82 -1 8 940 250 375 95 34 chrX 46565459 46565760 -120084536 + L2a LINE L2 3047 3416 -10 8 940 336 256 72 32 chrX 46566004 46566129 -120084167 - MIRc SINE MIR -43 225 96 8 940 684 266 40 144 chrX 46566687 46566889 -120083407 - B3A SINE B2 -3 192 12 8 940 264 254 0 0 chrX 46566917 46566988 -120083308 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 8 940 6204 150 18 3 chrX 46567329 46568377 -120081919 + Lx4A LINE L1 5865 6928 -130 8 940 246 329 44 63 chrX 46568378 46568537 -120081759 + RSINE1 SINE B4 2 157 -8 8 940 521 343 42 38 chrX 46568659 46568898 -120081398 - MIR SINE MIR -8 254 15 8 940 344 344 40 51 chrX 46568998 46569159 -120081137 - MIRm SINE MIR -115 161 3 8 940 291 361 75 43 chrX 46569203 46569458 -120080838 + L2b LINE L2 1253 1515 -1904 8 940 374 356 133 34 chrX 46569655 46570156 -120080140 + L2b LINE L2 2822 3372 -3 8 940 527 165 0 8 chrX 46570428 46570562 -120079734 + GA-rich Low_complexity Low_complexity 1 133 0 9 940 303 160 0 0 chrX 46570626 46570701 -120079595 + GA-rich Low_complexity Low_complexity 2 76 0 9 940 470 96 14 0 chrX 46570698 46570771 -120079525 + (GGA)n Simple_repeat Simple_repeat 3 76 0 9 940 243 0 0 0 chrX 46570836 46570863 -120079433 + (CA)n Simple_repeat Simple_repeat 2 28 0 9 940 549 0 0 0 chrX 46570863 46570923 -120079373 + (GA)n Simple_repeat Simple_repeat 2 62 0 9 940 411 21 0 0 chrX 46571263 46571311 -120078985 + (CA)n Simple_repeat Simple_repeat 1 48 0 9 940 686 325 68 45 chrX 46571697 46572049 -120078247 - MTD LTR MaLR -59 360 1 9 940 305 254 0 0 chrX 46572560 46572631 -120077665 - L2a LINE L2 -2 3424 3354 9 940 249 324 138 36 chrX 46574507 46574702 -120075594 - MIRc SINE MIR -6 262 48 9 940 2436 43 0 3 chrX 46574794 46575099 -120075197 + L1Md_F2 LINE L1 6279 6582 0 9 940 419 259 8 17 chrX 46575237 46575355 -120074941 + RMER16 LTR ERVK 337 453 -80 1 940 318 401 15 44 chrX 46575400 46575606 -120074690 + MIR3 SINE MIR 4 203 -5 1 940 547 307 78 5 chrX 46577062 46577255 -120073041 + ID_B1 SINE B4 5 211 -13 1 940 4448 62 5 3 chrX 46577419 46577990 -120072306 - Lx3_Mus LINE L1 -5 7004 6433 1 940 3159 103 41 4 chrX 46578015 46578524 -120071772 + Lx3_Mus LINE L1 5905 6432 -577 1 940 735 77 23 1 chrX 46578531 46578660 -120071636 + Lx3_Mus LINE L1 6798 6932 -49 1 940 215 189 0 0 chrX 46578834 46578871 -120071425 - B3A SINE B2 -157 41 5 1 940 318 343 132 31 chrX 46579812 46580161 -120070135 + L2 LINE L2 1896 2279 -1140 1 940 1094 271 26 61 chrX 46580986 46581178 -120069118 - MTE2a LTR MaLR -15 364 170 1 940 300 53 0 0 chrX 46581178 46581216 -120069080 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 940 1094 271 26 61 chrX 46581216 46581400 -120068896 - MTE2a LTR MaLR -210 169 2 1 940 747 52 0 0 chrX 46582893 46582989 -120067307 + (TTCC)n Simple_repeat Simple_repeat 3 98 0 1 940 455 255 31 0 chrX 46582994 46583092 -120067204 - B1_Mur2 SINE Alu -17 132 32 1 940 392 70 0 53 chrX 46583108 46583184 -120067112 - L1_Mus3 LINE L1 -12 6626 6555 1 940 694 285 117 28 chrX 46585135 46585220 -120065076 + L1MA4 LINE L1 5109 5196 -651 1 940 414 0 0 0 chrX 46585220 46585266 -120065030 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 940 964 269 43 6 chrX 46585266 46585617 -120064679 + L1MA4 LINE L1 5197 5647 -537 1 940 235 276 55 8 chrX 46585623 46585751 -120064545 + L1MA4 LINE L1 5806 5939 -361 1 940 309 51 0 0 chrX 46585777 46585816 -120064480 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 940 559 286 107 0 chrX 46585881 46586087 -120064209 + Lx8 LINE L1 6436 6663 -810 1 940 356 297 14 0 chrX 46586230 46586343 -120063953 + ERVL-B4-int LTR ERVL 4488 4637 -1077 1 940 318 311 202 4 chrX 46586565 46586817 -120063479 + L1MC LINE L1 2715 3016 -3130 1 940 254 274 17 17 chrX 46586839 46586958 -120063338 + L1M5 LINE L1 5712 5830 -334 1 940 4577 102 93 6 chrX 46586980 46587702 -120062594 + L1Md_F2 LINE L1 5798 6582 0 1 940 2787 192 94 16 chrX 46587715 46588408 -120061888 + Lx2B LINE L1 6244 6990 -10 1 940 815 193 0 7 chrX 46588460 46588596 -120061700 + B1_Mur1 SINE Alu 10 144 -5 1 940 4707 96 12 1 chrX 46588800 46589458 -120060838 - Lx LINE L1 -6 6648 5984 1 940 334 284 78 0 chrX 46589466 46589568 -120060728 + PB1D10 SINE Alu 7 116 -1 1 940 1206 301 72 39 chrX 46590178 46591267 -120059029 + L1MA10 LINE L1 5153 6283 -51 1 940 241 284 105 118 chrX 46591411 46591563 -120058733 - B4A SINE B4 -142 150 1 1 940 1118 292 90 17 chrX 46592026 46592607 -120057689 + Lx7 LINE L1 6817 7469 -4 1 940 23 54 0 0 chrX 46592672 46592709 -120057587 + AT_rich Low_complexity Low_complexity 1 37 0 1 940 185 278 0 69 chrX 46592781 46592839 -120057457 - MIR3 SINE MIR -17 191 138 1 940 268 208 13 13 chrX 46593743 46593821 -120056475 + (TA)n Simple_repeat Simple_repeat 1 78 0 1 940 270 56 0 0 chrX 46593826 46593862 -120056434 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 940 338 330 298 65 chrX 46594119 46594370 -120055926 + MLT1F2 LTR MaLR 1 309 -251 1 940 5095 42 5 5 chrX 46594370 46594998 -120055298 + L1Md_F2 LINE L1 5955 6582 0 1 940 384 344 68 16 chrX 46594998 46595190 -120055106 + MLT1F2 LTR MaLR 310 678 -2 1 940 185 374 18 18 chrX 46595853 46595962 -120054334 - L2a LINE L2 -17 3409 3301 1 940 840 146 14 21 chrX 46596355 46596495 -120053801 + B1_Mur4 SINE Alu 1 139 -11 1 940 621 0 0 0 chrX 46596495 46596564 -120053732 + (TAAAA)n Simple_repeat Simple_repeat 2 70 0 1 940 574 268 51 0 chrX 46596927 46597065 -120053231 + RSINE1 SINE B4 2 146 -19 1 940 1108 90 0 0 chrX 46597094 46597238 -120053058 - B1_Mus1 SINE Alu -3 145 2 1 940 2683 270 81 83 chrX 46597253 46598642 -120051654 - Charlie1a DNA MER1_type -64 1391 6 1 940 631 295 52 97 chrX 46598777 46599126 -120051170 - ORR1E LTR MaLR 0 359 27 1 940 623 252 35 21 chrX 46599122 46599335 -120050961 - RLTR26 LTR ERVK -213 414 169 1 940 278 291 12 12 chrX 46599754 46599834 -120050462 + B4 SINE B4 4 83 -209 1 940 2151 174 13 11 chrX 46599934 46600306 -120049990 + ORR1C1 LTR MaLR 1 373 -5 1 940 714 244 109 26 chrX 46600324 46600676 -120049620 - L1MA4 LINE L1 -1522 5951 5597 1 940 624 268 124 0 chrX 46600715 46600909 -120049387 - ID_B1 SINE B4 -3 221 4 1 940 279 186 109 40 chrX 46601006 46601107 -120049189 - Lx8 LINE L1 -9 7464 7357 1 940 465 19 0 0 chrX 46601111 46601165 -120049131 + (TC)n Simple_repeat Simple_repeat 2 55 0 1 940 347 306 66 0 chrX 46601728 46601849 -120048447 - MIR SINE MIR -23 239 111 1 940 188 359 7 121 chrX 46601889 46602038 -120048258 + L2c LINE L2 3025 3156 -231 1 940 560 297 32 37 chrX 46602198 46602387 -120047909 + B3A SINE B2 3 190 -8 1 940 719 227 0 0 chrX 46603780 46603934 -120046362 - Lx7 LINE L1 -830 6866 6713 1 940 1441 232 136 64 chrX 46603956 46604521 -120045775 + Lx7 LINE L1 7087 7692 -4 1 940 423 0 0 0 chrX 46604877 46604924 -120045372 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 940 740 260 94 0 chrX 46604924 46605178 -120045118 - B4 SINE B4 -13 279 2 1 940 1320 107 39 61 chrX 46606050 46606280 -120044016 + URR1B DNA MER1_type 1 225 0 1 940 908 231 35 43 chrX 46606446 46606704 -120043592 - Lx6 LINE L1 -26 7434 7179 1 940 1104 88 0 7 chrX 46606943 46607091 -120043205 - B1_Mm SINE Alu 0 147 1 1 940 337 231 93 0 chrX 46607152 46607260 -120043036 + L1M4 LINE L1 4688 4805 -1341 1 940 7532 66 2 10 chrX 46607905 46609312 -120040984 + L1_Mus1 LINE L1 5172 6567 0 1 940 1249 228 160 18 chrX 46609890 46610537 -120039759 + L1M4c LINE L1 2270 3008 -3374 1 940 252 0 0 0 chrX 46610575 46610603 -120039693 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 940 233 176 165 0 chrX 46610653 46610738 -120039558 + L1M4c LINE L1 3008 3106 -3273 1 940 578 96 0 0 chrX 46610736 46610819 -120039477 + Lx4B LINE L1 6411 6493 -565 1 940 8428 68 2 3 chrX 46610816 46612665 -120037631 - L1Md_F2 LINE L1 -12 6570 4723 1 940 3650 170 25 12 chrX 46612653 46613486 -120036810 - L1Md_F LINE L1 -5624 1100 242 1 940 896 152 0 0 chrX 46613487 46613632 -120036664 + Lx4A LINE L1 6475 6619 -439 1 940 870 273 33 10 chrX 46613741 46614044 -120036252 + L1M2 LINE L1 3355 3664 -2479 1 940 313 315 31 92 chrX 46614082 46614278 -120036018 + L1MB7 LINE L1 5884 6067 -117 1 940 24 0 0 0 chrX 46614390 46614414 -120035882 + AT_rich Low_complexity Low_complexity 1 24 0 1 940 262 241 0 0 chrX 46614458 46614512 -120035784 + ZP3AR Satellite Satellite 135 188 -24 1 940 779 21 0 0 chrX 46614472 46614566 -120035730 + BC1_Mm scRNA scRNA 1 94 -58 1 940 913 283 148 39 chrX 46614689 46615024 -120035272 - MTE2b LTR MaLR -1 420 3 1 940 228 182 0 0 chrX 46615318 46615362 -120034934 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 1 940 289 301 51 13 chrX 46616635 46616793 -120033503 - L1MA5 LINE L1 -57 6243 6080 1 940 253 260 0 52 chrX 46616871 46616948 -120033348 - ID4_ SINE ID -10 73 1 1 940 422 143 13 0 chrX 46618053 46618130 -120032166 + CT-rich Low_complexity Low_complexity 2 79 0 1 940 234 276 103 0 chrX 46619634 46619721 -120030575 - MER3 DNA MER1_type -58 151 56 1 940 189 333 185 25 chrX 46619895 46620052 -120030244 - MER5A DNA MER1_type -1 188 7 1 940 1008 281 33 14 chrX 46620092 46620511 -120029785 + L1MA6 LINE L1 5753 6179 -121 1 940 423 250 57 0 chrX 46620511 46620635 -120029661 + B1F SINE Alu 1 131 -18 1 940 236 200 95 53 chrX 46620656 46620751 -120029545 + L1MA6 LINE L1 6164 6262 -38 1 940 567 66 0 0 chrX 46620920 46620996 -120029300 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 940 399 243 0 80 chrX 46622161 46622273 -120028023 + PB1D10 SINE Alu 9 111 -6 1 940 404 143 0 0 chrX 46622353 46622416 -120027880 + Lx6 LINE L1 6270 6332 -1128 1 940 201 74 0 0 chrX 46622419 46622446 -120027850 + (A)n Simple_repeat Simple_repeat 1 27 0 1 940 253 351 28 56 chrX 46622452 46622594 -120027702 + MIR SINE MIR 114 251 -11 1 940 656 240 0 76 chrX 46622797 46622955 -120027341 - RSINE1 SINE B4 -17 148 3 1 940 23 0 0 0 chrX 46623381 46623404 -120026892 + AT_rich Low_complexity Low_complexity 1 23 0 1 940 278 304 26 70 chrX 46623674 46623830 -120026466 - B1F2 SINE Alu 0 149 1 1 940 279 219 0 15 chrX 46624166 46624231 -120026065 + GA-rich Low_complexity Low_complexity 2 65 0 1 940 284 301 39 169 chrX 46624604 46624864 -120025432 + MIRc SINE MIR 2 227 -41 1 940 477 0 0 0 chrX 46625186 46625239 -120025057 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 940 271 310 104 14 chrX 46627793 46627937 -120022359 + MIRc SINE MIR 83 239 -29 1 940 237 274 315 24 chrX 46630036 46630163 -120020133 - RSINE1 SINE B4 0 165 2 1 940 1770 77 0 0 chrX 46630838 46631105 -120019191 - L1Md_F2 LINE L1 0 6582 6346 1 940 234 233 81 0 chrX 46631396 46631482 -120018814 + L1ME2z LINE L1 6191 6283 -161 1 940 289 287 414 0 chrX 46631502 46631601 -120018695 + RSINE1 SINE B4 2 141 -24 1 940 294 29 0 0 chrX 46631602 46631637 -120018659 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 940 351 0 0 0 chrX 46631637 46631675 -120018621 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 940 2336 168 154 12 chrX 46631881 46632380 -120017916 + RMER4B LTR ERVK 16 585 0 1 940 485 325 6 24 chrX 46632487 46632654 -120017642 + B4A SINE B4 118 281 -11 1 940 564 271 7 14 chrX 46632818 46632964 -120017332 - B1F SINE Alu 0 149 5 1 940 338 340 86 89 chrX 46634091 46634440 -120015856 + L2c LINE L2 3038 3385 -2 2 940 243 0 0 0 chrX 46635253 46635280 -120015016 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 940 342 91 0 0 chrX 46635926 46635981 -120014315 + (TC)n Simple_repeat Simple_repeat 2 56 0 2 940 506 220 40 0 chrX 46637033 46637133 -120013163 - B1_Mur1 SINE Alu -1 148 45 2 940 22 0 0 0 chrX 46637527 46637549 -120012747 + AT_rich Low_complexity Low_complexity 1 22 0 2 940 299 312 79 132 chrX 46637954 46638272 -120012024 - L2c LINE L2 -7 3380 3080 2 940 208 350 41 35 chrX 46639623 46639768 -120010528 + MIR SINE MIR 16 161 -101 2 940 225 108 0 0 chrX 46640728 46640765 -120009531 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 940 24 0 0 0 chrX 46642025 46642049 -120008247 + AT_rich Low_complexity Low_complexity 1 24 0 2 940 1313 270 224 13 chrX 46642363 46642934 -120007362 + L1_Mur3 LINE L1 2425 3149 -2728 2 940 644 262 20 7 chrX 46642934 46643080 -120007216 + B1_Mur1 SINE Alu 1 148 -1 2 940 1466 248 59 0 chrX 46643080 46643572 -120006724 + L1_Mur3 LINE L1 3150 3713 -2167 2 940 299 292 18 0 chrX 46643652 46643765 -120006531 - L1_Mur3 LINE L1 -2450 3430 3316 2 940 1012 253 145 3 chrX 46643762 46644127 -120006169 + L1_Mur3 LINE L1 3725 4141 -1739 2 940 442 195 0 45 chrX 46644176 46644332 -120005964 + (TATATG)n Simple_repeat Simple_repeat 3 151 0 2 940 1266 86 5 36 chrX 46645397 46645590 -120004706 - B2_Mm2 SINE B2 -7 188 2 2 940 1194 248 92 17 chrX 46646058 46646407 -120003889 - MTE2b LTR MaLR -4 375 1 2 940 1849 42 8 0 chrX 46646444 46646683 -120003613 - L1Md_F2 LINE L1 -637 5945 5705 2 940 8570 58 3 3 chrX 46646833 46647990 -120002306 + L1Md_F2 LINE L1 4430 5586 -297 2 940 7949 53 4 3 chrX 46647991 46648985 -120001311 + L1Md_F2 LINE L1 5588 6582 0 2 940 34068 44 0 29 chrX 46649571 46654796 -119995500 + Lx3_Mus LINE L1 268 5589 -297 2 940 8920 6 3 0 chrX 46654796 46655786 -119994510 + L1Md_T LINE L1 5587 6579 -3 2 940 34068 58 0 30 chrX 46655786 46656283 -119994013 + Lx3_Mus LINE L1 5590 5921 -1091 2 940 2201 114 20 22 chrX 46656283 46656641 -119993655 + Lx3_Mus LINE L1 6616 6972 -12 2 940 185 0 40 0 chrX 46656641 46656666 -119993630 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2 940 387 0 0 0 chrX 46657593 46657636 -119992660 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 940 937 172 18 6 chrX 46658041 46658211 -119992085 - MTC LTR MaLR -243 178 7 2 940 307 330 26 35 chrX 46658247 46658363 -119991933 - PB1D10 SINE Alu -2 115 1 2 940 221 279 73 0 chrX 46658377 46658445 -119991851 - MIRb SINE MIR -66 202 130 2 940 330 277 69 49 chrX 46658595 46658739 -119991557 - MIRb SINE MIR -69 199 53 2 940 353 131 0 16 chrX 46659010 46659072 -119991224 - URR1B DNA MER1_type 0 225 165 2 940 431 181 14 48 chrX 46659067 46659212 -119991084 - RMER17C LTR ERVK -215 195 56 2 940 238 320 108 39 chrX 46660266 46660396 -119989900 - MIRb SINE MIR -26 242 104 2 117 618 14 0 0 chrX 46661625 46661696 -119988600 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 2 941 1205 55 0 0 chrX 46661713 46661858 -119988438 - B1_Mus2 SINE Alu 0 147 3 2 941 667 263 135 26 chrX 46662154 46662540 -119987756 - L1MA6 LINE L1 -30 6270 5843 2 941 889 234 49 0 chrX 46662785 46662990 -119987306 - B3 SINE B2 0 216 2 2 941 263 26 51 0 chrX 46663391 46663430 -119986866 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 2 941 676 312 104 61 chrX 46663437 46663904 -119986392 - L1MD LINE L1 -1658 4488 4027 2 941 410 0 20 0 chrX 46663904 46663954 -119986342 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 941 676 312 104 61 chrX 46663954 46664042 -119986254 - L1MD LINE L1 -2120 4026 3910 2 941 3619 36 7 7 chrX 46664096 46664538 -119985758 - L1Md_F3 LINE L1 -1 6583 6142 2 941 795 241 20 25 chrX 46664606 46664806 -119985490 + ORR1D1 LTR MaLR 176 374 0 2 941 325 309 93 7 chrX 46664886 46665026 -119985270 - Lx8 LINE L1 -64 7409 7258 2 941 228 280 0 0 chrX 46665140 46665190 -119985106 - ID_B1 SINE B4 -6 218 169 2 941 1108 152 0 0 chrX 46665202 46665380 -119984916 + URR1A DNA MER1_type 43 220 -6 2 941 229 284 27 0 chrX 46665380 46665454 -119984842 - L1MD LINE L1 -2486 3660 3585 2 941 230 311 47 0 chrX 46665521 46665669 -119984627 - L1M5 LINE L1 -2610 3536 3382 2 941 1389 128 138 11 chrX 46665876 46666136 -119984160 + ORR1B1 LTR MaLR 102 394 0 2 941 228 222 22 0 chrX 46666274 46666319 -119983977 + polypyrimidine Low_complexity Low_complexity 3 48 0 2 941 354 45 0 0 chrX 46666365 46666409 -119983887 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 941 322 369 41 0 chrX 46666487 46666682 -119983614 - L1M5 LINE L1 -503 5659 5457 2 941 245 306 0 23 chrX 46666707 46666794 -119983502 - Lx7 LINE L1 -24 7672 7588 2 941 686 289 108 13 chrX 46666848 46667164 -119983132 - Lx7 LINE L1 -327 7369 7024 2 941 344 315 48 20 chrX 46667164 46667310 -119982986 + MTEa LTR MaLR 230 379 0 2 941 382 264 8 0 chrX 46667520 46667645 -119982651 + Lx9 LINE L1 7392 7517 -127 2 941 386 175 12 0 chrX 46667652 46667732 -119982564 + (TG)n Simple_repeat Simple_repeat 2 82 0 2 941 517 289 62 16 chrX 46667742 46667985 -119982311 + L1MD1 LINE L1 5983 6236 -6 2 941 536 239 96 23 chrX 46668260 46668478 -119981818 - Lx7 LINE L1 -511 7185 6952 2 941 532 276 0 50 chrX 46668510 46668651 -119981645 + B3 SINE B2 42 175 -41 2 941 363 219 48 68 chrX 46668727 46668830 -119981466 - PB1D10 SINE Alu -12 105 5 2 941 581 319 52 59 chrX 46669069 46669481 -119980815 + MLT2C1 LTR ERVL 5 411 -3 2 941 254 300 31 4 chrX 46669571 46669709 -119980587 + L1MC4 LINE L1 6815 6959 -923 2 941 563 98 0 11 chrX 46670269 46670362 -119979934 + (TA)n Simple_repeat Simple_repeat 2 93 0 2 941 968 289 47 7 chrX 46670539 46670814 -119979482 + B4 SINE B4 3 288 -4 2 941 317 305 11 0 chrX 46671001 46671096 -119979200 + Lx6 LINE L1 7077 7172 -288 2 941 21 0 0 0 chrX 46671434 46671455 -119978841 + AT_rich Low_complexity Low_complexity 1 21 0 2 941 2190 203 107 4 chrX 46671564 46672043 -119978253 + MT2A LTR ERVL 6 533 0 2 941 310 253 129 21 chrX 46672110 46672203 -119978093 + L1MC LINE L1 3675 3777 -2369 2 941 364 256 98 22 chrX 46672556 46672780 -119977516 - L1MDa LINE L1 -4411 2222 1982 2 941 318 314 0 0 chrX 46672801 46672887 -119977409 + B2_Mm2 SINE B2 1 86 -109 2 941 565 297 101 45 chrX 46673001 46673120 -119977176 - Lx8 LINE L1 -6 7467 7330 2 941 276 30 0 0 chrX 46673120 46673153 -119977143 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 941 477 0 0 0 chrX 46673153 46673205 -119977091 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 941 565 297 101 45 chrX 46673205 46673482 -119976814 - Lx8 LINE L1 -144 7329 7049 2 941 823 310 92 10 chrX 46673694 46673997 -119976299 + MLT1A0 LTR MaLR 26 353 -12 2 941 357 346 109 23 chrX 46674354 46674620 -119975676 - L1MC4a LINE L1 -1837 6045 5757 2 941 355 333 45 0 chrX 46675133 46675265 -119975031 - MIRc SINE MIR -49 219 82 2 941 7062 76 30 0 chrX 46675519 46676496 -119973800 + Lx3_Mus LINE L1 6002 7007 -2 2 941 459 299 19 30 chrX 46676535 46676679 -119973617 - MLT1F1 LTR MaLR -32 621 411 2 941 1293 183 71 68 chrX 46676868 46677190 -119973106 - ORR1D1 LTR MaLR -51 323 1 2 941 435 140 30 10 chrX 46677269 46677370 -119972926 + (CCCTAA)n Simple_repeat Simple_repeat 2 104 0 2 941 226 312 42 0 chrX 46677463 46677559 -119972737 - MIR SINE MIR -78 184 85 2 941 1374 196 64 64 chrX 46677559 46677919 -119972377 + ORR1D1 LTR MaLR 1 360 -14 2 941 316 336 22 44 chrX 46678199 46678336 -119971960 - L2a LINE L2 -381 3045 2912 2 941 453 19 0 0 chrX 46678470 46678524 -119971772 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 941 305 331 82 29 chrX 46679530 46679578 -119970718 + L1M4b LINE L1 994 1040 -6294 2 941 189 74 0 0 chrX 46679578 46679605 -119970691 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 941 305 331 82 29 chrX 46679605 46679727 -119970569 + L1M4b LINE L1 1041 1172 -6162 2 941 815 291 85 10 chrX 46680009 46680419 -119969877 + L1M4b LINE L1 1251 1691 -5643 2 941 262 250 34 56 chrX 46680460 46680549 -119969747 + L1M4b LINE L1 1830 1916 -4988 2 941 775 249 113 0 chrX 46680585 46680770 -119969526 + B3 SINE B2 2 207 -9 2 941 263 333 33 25 chrX 46682252 46682372 -119967924 + L2 LINE L2 2689 2809 -610 2 941 23 78 0 0 chrX 46682509 46682560 -119967736 + AT_rich Low_complexity Low_complexity 1 51 0 2 941 264 30 0 0 chrX 46682647 46682680 -119967616 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 2 941 295 271 104 28 chrX 46682680 46682824 -119967472 - L1MD2 LINE L1 -325 6034 5880 2 941 192 40 0 0 chrX 46682834 46682859 -119967437 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 2 941 1126 241 73 22 chrX 46682866 46683180 -119967116 + MTEa LTR MaLR 1 330 -49 2 941 783 57 9 0 chrX 46683182 46683288 -119967008 - B1_Mus2 SINE Alu -1 146 40 2 941 1392 68 17 0 chrX 46683289 46683466 -119966830 - B2_Mm2 SINE B2 -15 180 1 2 941 3892 292 93 26 chrX 46683502 46684838 -119965458 + MTE2b-int LTR MaLR 1 1403 -106 2 941 411 125 42 0 chrX 46684844 46684916 -119965380 - ORR1D1 LTR MaLR 0 374 300 2 941 2630 77 6 6 chrX 46684981 46685345 -119964951 - L1_Mus3 LINE L1 0 6638 6275 2 941 1224 223 93 33 chrX 46685346 46685494 -119964802 - ORR1D1 LTR MaLR -55 319 173 2 941 549 0 0 0 chrX 46685494 46685555 -119964741 + (GA)n Simple_repeat Simple_repeat 2 62 0 2 941 1224 223 93 33 chrX 46685555 46685707 -119964589 - ORR1D1 LTR MaLR -202 172 1 2 941 1165 227 42 45 chrX 46685708 46685994 -119964302 - ORR1D2 LTR MaLR -81 289 5 2 941 998 231 16 41 chrX 46686004 46686248 -119964048 + MTE2b-int LTR MaLR 1343 1580 0 2 941 1060 279 69 75 chrX 46686248 46686519 -119963777 + MTE2b LTR MaLR 1 283 -96 2 941 206 32 0 31 chrX 46686519 46686551 -119963745 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 941 2348 96 16 0 chrX 46686561 46686883 -119963413 - ORR1A2 LTR MaLR 0 327 1 2 941 1060 279 69 75 chrX 46686883 46686906 -119963390 + MTE2b LTR MaLR 284 304 -75 2 941 912 251 30 52 chrX 46686932 46687201 -119963095 - MTE2a LTR MaLR -6 373 111 2 941 974 87 94 0 chrX 46687204 46687353 -119962943 - Lx2 LINE L1 -412 6585 6423 2 941 449 253 40 62 chrX 46687353 46687530 -119962766 - LTR55 LTR ERV -374 174 2 2 941 400 222 246 25 chrX 46687530 46687733 -119962563 - L1MD LINE L1 -777 5582 5335 2 941 236 326 30 30 chrX 46688101 46688202 -119962094 + MTE2b LTR MaLR 279 379 0 2 941 964 274 142 21 chrX 46688219 46688921 -119961375 - L1MD LINE L1 -831 5315 4529 2 941 21 0 0 0 chrX 46688945 46688966 -119961330 + AT_rich Low_complexity Low_complexity 1 21 0 3 941 700 261 22 22 chrX 46689075 46689259 -119961037 - B3 SINE B2 0 216 33 3 941 1057 231 0 9 chrX 46689259 46689477 -119960819 + B3 SINE B2 1 216 0 3 941 352 274 14 53 chrX 46689603 46689811 -119960485 - L1MD LINE L1 -3372 2774 2575 2 941 359 267 35 0 chrX 46689834 46689920 -119960376 - PB1D10 SINE Alu -6 111 23 3 941 310 323 44 29 chrX 46689948 46690085 -119960211 - L1MD LINE L1 -3558 2588 2450 2 941 773 78 0 0 chrX 46690299 46690415 -119959881 - L1_Mus2 LINE L1 0 6566 6451 3 941 396 355 70 48 chrX 46690420 46690788 -119959508 - MLT1H2 LTR MaLR -8 481 140 3 941 1637 164 39 72 chrX 46690845 46691179 -119959117 + ORR1A4 LTR MaLR 1 323 -6 3 941 264 59 0 0 chrX 46691288 46691322 -119958974 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 3 941 729 63 0 0 chrX 46691686 46691781 -119958515 + (TTTTC)n Simple_repeat Simple_repeat 4 98 0 3 941 937 73 8 0 chrX 46691781 46691904 -119958392 - B1_Mm SINE Alu -12 135 12 3 941 1136 153 113 0 chrX 46691920 46692123 -119958173 - URR1A DNA MER1_type 0 226 1 3 941 201 94 0 0 chrX 46692161 46692193 -119958103 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 941 270 0 0 0 chrX 46692388 46692418 -119957878 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 941 393 127 0 0 chrX 46692420 46692499 -119957797 + (GA)n Simple_repeat Simple_repeat 2 80 0 3 941 1106 108 0 0 chrX 46692698 46692846 -119957450 + B1_Mus1 SINE Alu 1 148 0 3 941 894 316 71 43 chrX 46692862 46693285 -119957011 - MER31B LTR ERV1 -31 435 1 3 941 385 273 60 42 chrX 46695159 46695328 -119954968 - MIRb SINE MIR -47 221 45 3 941 333 314 227 42 chrX 46695604 46695937 -119954359 + MLT1A1 LTR MaLR 8 402 -6 3 941 364 344 53 60 chrX 46696254 46696671 -119953625 - L1M4 LINE L1 -6072 470 57 3 941 2318 295 84 29 chrX 46696701 46697937 -119952359 - L1M4b LINE L1 -5776 1558 255 3 941 24 0 0 0 chrX 46697937 46697961 -119952335 + AT_rich Low_complexity Low_complexity 1 24 0 3 941 311 312 58 7 chrX 46697983 46698138 -119952158 - L1M4b LINE L1 -7076 258 96 3 941 574 286 19 7 chrX 46698274 46698429 -119951867 - RSINE1 SINE B4 -6 159 3 3 941 393 269 137 7 chrX 46698457 46698603 -119951693 + Lx8 LINE L1 7059 7223 -250 3 941 283 325 0 8 chrX 46698827 46698951 -119951345 + L1MC3 LINE L1 7300 7422 -363 3 941 407 313 0 0 chrX 46698983 46699082 -119951214 + PB1D10 SINE Alu 6 104 -13 3 941 246 62 0 0 chrX 46699084 46699116 -119951180 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 3 941 462 267 110 55 chrX 46699147 46699420 -119950876 + L1MC3 LINE L1 7440 7727 -58 3 941 22 0 0 0 chrX 46699996 46700018 -119950278 + AT_rich Low_complexity Low_complexity 1 22 0 3 941 207 0 0 0 chrX 46700584 46700607 -119949689 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 941 249 336 26 80 chrX 46701081 46701194 -119949102 + MIR SINE MIR 43 149 -59 3 941 281 364 64 23 chrX 46701429 46701693 -119948603 + L2a LINE L2 3121 3395 -31 3 941 517 304 41 6 chrX 46701728 46701900 -119948396 - MIR SINE MIR -2 260 83 3 941 225 316 71 48 chrX 46701904 46702095 -119948201 - MIRb SINE MIR -49 219 25 3 941 398 291 0 19 chrX 46702880 46702985 -119947311 - PB1D7 SINE Alu -5 115 13 3 941 259 313 220 25 chrX 46702985 46702996 -119947300 - ID_B1 SINE B4 -1 221 83 3 941 255 331 30 89 chrX 46703105 46703274 -119947022 + Helitron1Nb_Mam RC Helitron 10 168 -948 3 941 970 244 8 39 chrX 46703430 46703686 -119946610 + Helitron1Na_Mam RC Helitron 815 1062 0 3 941 234 294 76 38 chrX 46703707 46703838 -119946458 - MIRb SINE MIR -26 242 107 3 941 241 300 117 62 chrX 46703967 46704101 -119946195 - PB1 SINE Alu -18 109 1 3 941 972 168 82 50 chrX 46704236 46704455 -119945841 - URR1A DNA MER1_type 0 226 1 3 941 213 260 0 141 chrX 46704622 46704707 -119945589 - PB1D10 SINE Alu -12 105 33 3 941 24308 38 1 0 chrX 46704810 46709568 -119940728 + L1Md_T LINE L1 1 4443 -1443 3 941 33849 35 0 0 chrX 46709571 46715121 -119935175 + L1Md_T LINE L1 1 5589 -297 3 941 9023 6 0 0 chrX 46715121 46716177 -119934119 + L1Md_T LINE L1 5590 6585 0 3 941 9569 21 0 0 chrX 46716177 46717337 -119932959 + L1Md_T LINE L1 4430 5589 -297 3 941 9013 6 0 0 chrX 46717337 46718363 -119931933 + L1Md_T LINE L1 5590 6585 0 3 941 376 323 90 0 chrX 46718843 46719010 -119931286 - MER2 DNA MER2_type -81 264 83 3 941 430 254 17 17 chrX 46719338 46719454 -119930842 - PB1D10 SINE Alu -1 116 1 3 941 542 92 25 25 chrX 46719511 46719633 -119930663 + (CA)n Simple_repeat Simple_repeat 2 123 0 3 941 594 145 0 0 chrX 46719668 46719792 -119930504 + (TC)n Simple_repeat Simple_repeat 2 125 0 3 941 207 0 0 0 chrX 46719792 46719815 -119930481 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 941 212 412 0 0 chrX 46719970 46720055 -119930241 + MIRb SINE MIR 35 119 -149 3 941 195 338 25 12 chrX 46720106 46720187 -119930109 - L2a LINE L2 0 3426 3345 3 941 358 325 60 45 chrX 46720501 46720701 -119929595 - MIRb SINE MIR -57 211 9 3 941 585 298 124 50 chrX 46721550 46722115 -119928181 - L1MA9 LINE L1 -39 6273 5667 3 941 408 40 0 0 chrX 46723137 46723187 -119927109 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 941 437 34 17 0 chrX 46723354 46723413 -119926883 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 941 269 239 0 0 chrX 46724695 46724762 -119925534 - L1MA4A LINE L1 -9 6282 6216 3 941 755 267 58 38 chrX 46724804 46725147 -119925149 + L1MA7 LINE L1 5737 6086 -205 3 941 1114 94 105 0 chrX 46725321 46725492 -119924804 - B2_Mm2 SINE B2 -6 189 1 3 941 294 95 0 0 chrX 46725688 46725730 -119924566 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 941 234 0 0 0 chrX 46725988 46726014 -119924282 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 941 2763 36 42 0 chrX 46726118 46726448 -119923848 + ORR1A0 LTR MaLR 3 346 0 3 941 886 265 19 0 chrX 46726544 46726749 -119923547 + ID_B1 SINE B4 2 210 -14 3 941 333 0 0 0 chrX 46726749 46726786 -119923510 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 3 941 224 200 15 0 chrX 46726868 46726933 -119923363 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 3 941 519 17 0 0 chrX 46726934 46726994 -119923302 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 941 500 309 95 0 chrX 46726994 46727120 -119923176 - RSINE1 SINE B4 -24 141 4 3 941 1411 235 63 15 chrX 46727240 46727637 -119922659 + MTD LTR MaLR 4 419 0 3 941 399 328 79 0 chrX 46727783 46727960 -119922336 - MIRb SINE MIR -27 241 51 3 941 1102 287 53 17 chrX 46728214 46728689 -119921607 - L1MA4A LINE L1 -373 5930 5439 3 941 196 307 63 51 chrX 46728807 46728886 -119921410 + L2c LINE L2 3283 3362 -25 3 941 314 363 24 0 chrX 46729252 46729376 -119920920 - MIR SINE MIR -25 237 111 3 941 180 307 164 31 chrX 46729466 46729691 -119920605 - L2 LINE L2 -800 2619 2365 3 941 378 302 190 43 chrX 46729728 46729939 -119920357 - MIR SINE MIR -3 259 18 3 941 251 277 11 82 chrX 46730650 46730748 -119919548 + MIR SINE MIR 173 260 -8 3 941 306 0 0 0 chrX 46731193 46731227 -119919069 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 941 459 0 0 0 chrX 46731227 46731277 -119919019 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 941 389 328 0 15 chrX 46731976 46732112 -119918184 - MIR SINE MIR -22 240 107 3 941 632 308 129 31 chrX 46732122 46732548 -119917748 + MLT1C LTR MaLR 1 467 0 3 941 226 250 12 36 chrX 46732717 46732800 -119917496 + MIR3 SINE MIR 128 208 0 3 941 235 283 42 32 chrX 46733946 46734041 -119916255 + MIRb SINE MIR 125 220 -48 3 941 280 311 0 0 chrX 46734100 46734174 -119916122 + ID4 SINE ID 10 83 0 3 941 801 0 0 0 chrX 46734373 46734462 -119915834 + (TCTCC)n Simple_repeat Simple_repeat 2 90 0 3 941 450 53 0 0 chrX 46734602 46734659 -119915637 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 3 941 1217 194 59 33 chrX 46734660 46734996 -119915300 - Lx3C LINE L1 -11 6965 6656 3 941 258 338 0 29 chrX 46735112 46735182 -119915114 - ID4_ SINE ID -14 69 2 3 941 209 333 39 39 chrX 46735962 46736065 -119914231 - MIRb SINE MIR -18 250 148 3 941 210 371 101 14 chrX 46736136 46736344 -119913952 - MIRb SINE MIR 0 268 43 3 941 394 286 29 0 chrX 46737649 46737754 -119912542 - MER5A DNA MER1_type -27 162 55 3 941 1301 229 55 39 chrX 46737821 46738099 -119912197 + RCHARR1 DNA MER1_type 586 864 -110 3 941 234 0 0 0 chrX 46738099 46738125 -119912171 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 941 1301 229 55 39 chrX 46738125 46738227 -119912069 + RCHARR1 DNA MER1_type 865 972 -2 3 941 2046 211 30 2 chrX 46738229 46738624 -119911672 + MTD LTR MaLR 1 406 -13 3 941 205 348 44 9 chrX 46738642 46738755 -119911541 - L2 LINE L2 -514 2905 2789 3 941 244 216 20 0 chrX 46738765 46738816 -119911480 + MER5B DNA MER1_type 4 55 -123 3 941 261 0 0 0 chrX 46738931 46738960 -119911336 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 941 796 163 37 0 chrX 46738960 46739095 -119911201 - B1_Mur4 SINE Alu -10 140 1 3 941 1314 216 39 6 chrX 46739361 46739692 -119910604 + Lx9 LINE L1 7296 7637 -7 3 941 206 297 85 47 chrX 46739952 46740058 -119910238 - MIRb SINE MIR -44 224 115 3 941 236 310 76 23 chrX 46740317 46740457 -119909839 - MIR SINE MIR -23 185 38 3 941 217 314 34 34 chrX 46741109 46741198 -119909098 - MIRb SINE MIR -15 253 165 3 941 232 316 28 42 chrX 46741376 46741518 -119908778 - L2a LINE L2 -30 3396 3257 3 941 222 222 11 22 chrX 46741940 46742032 -119908264 + GA-rich Low_complexity Low_complexity 1 91 0 3 941 214 278 19 0 chrX 46742455 46742509 -119907787 + CT-rich Low_complexity Low_complexity 2 56 0 3 941 318 230 10 3 chrX 46742646 46742731 -119907565 + MIRc SINE MIR 70 156 -52 3 941 252 374 28 71 chrX 46743476 46743617 -119906679 + L2b LINE L2 3236 3370 -5 4 941 676 368 85 22 chrX 46743892 46744700 -119905596 - L2a LINE L2 -18 3408 2550 4 941 21 0 0 0 chrX 46744763 46744784 -119905512 + AT_rich Low_complexity Low_complexity 1 21 0 4 941 210 303 73 36 chrX 46744857 46744994 -119905302 + L2b LINE L2 3234 3375 0 4 941 3885 50 0 0 chrX 46745392 46745857 -119904439 - L1_Mus1 LINE L1 0 6567 6103 4 941 2595 51 9 12 chrX 46746195 46746534 -119903762 + L1Md_F3 LINE L1 6247 6584 0 4 941 268 316 0 0 chrX 46746879 46746955 -119903341 + ID4_ SINE ID 2 77 -6 4 941 226 306 184 50 chrX 46747025 46747166 -119903130 + MIRm SINE MIR 38 197 -79 4 941 946 277 47 16 chrX 46747608 46747971 -119902325 - L1MC1 LINE L1 -20 6313 5940 4 941 417 304 164 60 chrX 46749062 46749398 -119900898 - MLT1A LTR MaLR -3 371 1 4 941 22 0 0 0 chrX 46749633 46749655 -119900641 + AT_rich Low_complexity Low_complexity 1 22 0 4 941 5253 69 18 11 chrX 46749655 46750363 -119899933 - L1_Mus1 LINE L1 -2 6565 5853 4 941 965 274 20 4 chrX 46750698 46750947 -119899349 - MLT1A-int LTR MaLR -639 732 480 4 941 1287 68 0 0 chrX 46750953 46751130 -119899166 - L1Md_F2 LINE L1 -482 6100 5924 4 941 3659 43 9 5 chrX 46751131 46751572 -119898724 + L1Md_F2 LINE L1 6128 6570 -12 4 941 306 287 74 0 chrX 46751580 46751688 -119898608 - MLT1A-int LTR MaLR -902 469 354 4 941 377 268 8 43 chrX 46751746 46751863 -119898433 - MLT1A-int LTR MaLR -1257 114 2 4 941 1510 207 100 17 chrX 46752896 46753467 -119896829 + Lx7 LINE L1 5276 5910 -1786 4 941 32 26 0 0 chrX 46753489 46753528 -119896768 + AT_rich Low_complexity Low_complexity 1 39 0 4 941 839 261 237 73 chrX 46753621 46754066 -119896230 - Lx8 LINE L1 -351 7122 6604 4 941 194 347 29 95 chrX 46754583 46754688 -119895608 - L2c LINE L2 -5 3382 3285 4 941 311 295 0 6 chrX 46755103 46755205 -119895091 - MIRb SINE MIR -9 259 157 4 941 2087 329 94 19 chrX 46756264 46757442 -119892854 - Lx8 LINE L1 -6 7467 6202 4 941 294 220 18 83 chrX 46757965 46758074 -119892222 - L1ME2z LINE L1 -449 6168 6067 4 941 26 0 0 0 chrX 46758543 46758569 -119891727 + AT_rich Low_complexity Low_complexity 1 26 0 4 941 321 296 91 24 chrX 46758808 46759016 -119891280 - L1ME2z LINE L1 -375 5977 5756 4 941 1301 256 95 25 chrX 46759182 46759781 -119890515 - L1ME2z LINE L1 -587 5765 5067 4 941 2928 39 8 0 chrX 46759781 46760139 -119890157 + L1Md_F2 LINE L1 6221 6581 -1 4 941 1301 268 174 34 chrX 46760139 46760648 -119889648 - L1ME2z LINE L1 -1253 5066 4521 4 941 380 279 26 6 chrX 46760638 46760787 -119889509 - L1ME2z LINE L1 -1977 4336 4188 4 941 745 182 0 16 chrX 46760978 46761106 -119889190 - B3A SINE B2 -72 126 1 4 941 4419 37 6 4 chrX 46761313 46761851 -119888445 - L1Md_F3 LINE L1 -1 6583 6045 4 941 393 273 120 36 chrX 46762078 46762352 -119887944 - L1MA4 LINE L1 -360 5940 5644 4 941 556 330 52 15 chrX 46762324 46762804 -119887492 - L1ME2z LINE L1 -2528 3791 3294 4 941 2438 72 12 0 chrX 46762843 46763174 -119887122 - Lx3_Mus LINE L1 0 7009 6675 4 941 658 129 9 0 chrX 46763367 46763498 -119886798 - L1_Mus2 LINE L1 -479 6159 6023 4 941 3460 69 16 0 chrX 46763499 46763950 -119886346 + L1_Mus2 LINE L1 6109 6566 0 4 941 332 185 0 0 chrX 46763968 46764022 -119886274 - B1F SINE Alu -88 61 8 4 941 225 281 140 22 chrX 46764190 46764412 -119885884 - L1ME2z LINE L1 -4825 1575 1328 4 941 367 159 0 0 chrX 46764408 46764477 -119885819 + L1_Mus2 LINE L1 2387 2455 -3428 4 941 48 18 0 0 chrX 46764533 46764588 -119885708 + AT_rich Low_complexity Low_complexity 1 55 0 4 941 32958 84 6 5 chrX 46764588 46770737 -119879559 - L1Md_F2 LINE L1 0 6582 446 4 941 21363 113 9 6 chrX 46770735 46774815 -119875481 + L1_Mus2 LINE L1 2439 6528 -38 4 941 10930 63 1 0 chrX 46774811 46776280 -119874016 + L1Md_F2 LINE L1 4116 5586 -297 4 941 7954 52 5 1 chrX 46776280 46777272 -119873024 + L1Md_F2 LINE L1 5587 6582 0 4 941 26 74 0 0 chrX 46777272 46777326 -119872970 + AT_rich Low_complexity Low_complexity 1 54 0 4 941 236 294 188 53 chrX 46777563 46777696 -119872600 + MLT1H LTR MaLR 10 160 -419 4 941 271 300 55 0 chrX 46777997 46778107 -119872189 + MLT1H LTR MaLR 418 533 -16 4 941 38792 21 1 8 chrX 46778245 46784913 -119865383 + L1Md_A LINE L1 1 5586 -297 4 941 9050 11 0 0 chrX 46784913 46785909 -119864387 + L1Md_A LINE L1 5587 6582 0 4 941 662 242 8 0 chrX 46787541 46787669 -119862627 + B3 SINE B2 2 130 -86 4 941 707 337 61 12 chrX 46787780 46788110 -119862186 - Lx9 LINE L1 -176 7468 7123 4 941 5614 174 9 34 chrX 46788465 46788637 -119861659 - Lx5 LINE L1 -438 6612 6446 4 941 1060 66 15 0 chrX 46788637 46788773 -119861523 + B1_Mus1 SINE Alu 2 139 -9 4 941 274 23 23 23 chrX 46788773 46788817 -119861479 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 4 941 5614 163 6 22 chrX 46788817 46789773 -119860523 - Lx5 LINE L1 -605 6445 5504 4 941 2157 198 71 0 chrX 46789774 46790183 -119860113 + Lx5 LINE L1 6613 7050 0 4 941 1576 111 86 29 chrX 46790930 46791209 -119859087 - L1_Mus3 LINE L1 0 6638 6344 4 941 217 0 0 35 chrX 46791615 46791644 -119858652 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 941 418 124 38 0 chrX 46791646 46791751 -119858545 + (CAGA)n Simple_repeat Simple_repeat 4 112 0 4 941 3427 51 5 9 chrX 46791906 46792341 -119857955 + L1Md_F2 LINE L1 6148 6580 -2 4 941 650 198 206 38 chrX 46792364 46792548 -119857748 + B3 SINE B2 2 216 0 4 942 758 136 8 0 chrX 46794225 46794357 -119855939 + (TC)n Simple_repeat Simple_repeat 2 134 0 4 942 426 76 61 0 chrX 46795061 46795134 -119855162 - L1Md_F LINE L1 -6352 267 221 4 942 5012 65 0 6 chrX 46795155 46795780 -119854516 + L1Md_F2 LINE L1 5942 6563 -19 4 942 186 43 0 0 chrX 46795780 46795803 -119854493 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 4 942 283 352 75 12 chrX 46796350 46796511 -119853785 + MIR SINE MIR 11 181 -81 4 942 390 129 23 12 chrX 46796605 46796691 -119853605 + (TA)n Simple_repeat Simple_repeat 1 87 0 4 942 432 246 56 0 chrX 46796837 46796963 -119853333 - L1MA9 LINE L1 -3 6309 6177 4 942 251 299 18 45 chrX 46796986 46797098 -119853198 - L1MA9 LINE L1 -189 6102 5994 4 942 682 279 6 6 chrX 46797619 46797792 -119852504 - L3 LINE CR1 -1062 3427 3255 4 942 261 0 0 0 chrX 46797985 46798014 -119852282 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 942 855 300 144 26 chrX 46798352 46798804 -119851492 - MLT1D LTR MaLR 0 505 1 4 942 260 274 35 12 chrX 46800283 46800368 -119849928 + L2b LINE L2 3289 3375 0 4 942 300 235 0 86 chrX 46801701 46801794 -119848502 - MIRc SINE MIR -113 155 71 4 942 270 56 0 0 chrX 46802878 46802914 -119847382 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 942 383 132 212 24 chrX 46803914 46803999 -119846297 - B1F SINE Alu -8 141 41 4 942 21 0 0 0 chrX 46804051 46804072 -119846224 + AT_rich Low_complexity Low_complexity 1 21 0 4 942 26 0 0 0 chrX 46804156 46804182 -119846114 + AT_rich Low_complexity Low_complexity 1 26 0 4 942 2717 85 26 10 chrX 46804886 46805277 -119845019 - Lx LINE L1 -6 6648 6252 4 942 1437 286 88 18 chrX 46805486 46806258 -119844038 - L1ME3A LINE L1 -169 6071 5236 4 942 256 343 5 10 chrX 46806673 46806802 -119843494 - MIR SINE MIR -132 136 7 4 942 199 309 0 0 chrX 46809019 46809074 -119841222 - MIR3 SINE MIR -1 207 153 4 942 390 42 0 0 chrX 46809296 46809344 -119840952 + (TGG)n Simple_repeat Simple_repeat 1 48 0 4 942 24 0 0 0 chrX 46809659 46809683 -119840613 + AT_rich Low_complexity Low_complexity 1 24 0 4 942 309 51 0 0 chrX 46809824 46809863 -119840433 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 942 363 23 0 0 chrX 46809863 46809906 -119840390 + (GA)n Simple_repeat Simple_repeat 2 45 0 4 942 882 245 0 68 chrX 46810047 46810266 -119840030 - B3 SINE B2 -12 204 1 4 942 443 322 23 64 chrX 46811713 46811932 -119838364 + MIRb SINE MIR 59 268 0 4 942 180 0 0 0 chrX 46812598 46812618 -119837678 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 942 401 400 12 8 chrX 46813036 46813283 -119837013 + MIRb SINE MIR 2 249 -19 4 942 350 244 117 8 chrX 46813545 46813665 -119836631 + MIRb SINE MIR 91 223 -45 4 942 477 0 0 0 chrX 46813949 46814002 -119836294 + (GA)n Simple_repeat Simple_repeat 2 54 0 4 942 2339 70 6 3 chrX 46814550 46814863 -119835433 - L1_Mus2 LINE L1 0 6566 6253 4 942 759 175 14 27 chrX 46815618 46815750 -119834546 + B1_Mur3 SINE Alu 5 138 -11 4 942 299 25 25 0 chrX 46815750 46815790 -119834506 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 4 942 303 49 0 0 chrX 46815794 46815835 -119834461 + (CCA)n Simple_repeat Simple_repeat 1 41 0 4 942 312 336 26 32 chrX 46817227 46817381 -119832915 + MIR3 SINE MIR 17 169 -39 4 942 240 186 18 39 chrX 46817883 46817959 -119832337 + L1MA4 LINE L1 6227 6298 -2 4 942 295 314 50 21 chrX 46818306 46818446 -119831850 + MIRc SINE MIR 89 232 -36 4 942 289 250 96 39 chrX 46820283 46820387 -119829909 - PB1D10 SINE Alu -2 115 6 4 942 470 287 73 42 chrX 46821042 46821355 -119828941 - L1ME4a LINE L1 -5 6119 5797 4 942 203 54 81 0 chrX 46821737 46821774 -119828522 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 4 942 344 285 53 15 chrX 46824293 46824425 -119825871 - MIR3 SINE MIR -34 174 38 4 942 528 93 0 0 chrX 46825141 46825216 -119825080 + (GA)n Simple_repeat Simple_repeat 2 76 0 4 942 386 250 55 9 chrX 46825223 46825332 -119824964 + B1F SINE Alu 7 120 -29 4 942 281 271 0 0 chrX 46825339 46825398 -119824898 + polypurine Low_complexity Low_complexity 3 61 0 4 942 340 259 17 26 chrX 46827270 46827385 -119822911 + L1ME4a LINE L1 5737 5850 -274 4 942 277 333 47 8 chrX 46828272 46828399 -119821897 - L3 LINE CR1 -3567 922 791 4 942 23 0 0 0 chrX 46828683 46828706 -119821590 + AT_rich Low_complexity Low_complexity 1 23 0 4 942 219 186 0 0 chrX 46829218 46829261 -119821035 + T-rich Low_complexity Low_complexity 1 43 0 4 942 422 281 15 15 chrX 46829671 46829801 -119820495 - MIRb SINE MIR -115 153 24 4 942 318 80 0 0 chrX 46830066 46830116 -119820180 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 942 360 0 0 0 chrX 46830366 46830406 -119819890 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 942 411 68 0 0 chrX 46831223 46831282 -119819014 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 942 340 65 38 25 chrX 46831426 46831505 -119818791 + (CAAAA)n Simple_repeat Simple_repeat 2 81 0 4 942 619 294 20 79 chrX 46831748 46832009 -119818287 + MIRb SINE MIR 26 267 -1 5 942 195 322 77 86 chrX 46832074 46832295 -119818001 - L2c LINE L2 -145 3242 3024 5 942 588 14 0 0 chrX 46832629 46832698 -119817598 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 942 684 82 24 48 chrX 46832695 46832862 -119817434 + (CAGAGA)n Simple_repeat Simple_repeat 6 168 0 5 942 262 313 12 0 chrX 46833450 46833533 -119816763 + (CA)n Simple_repeat Simple_repeat 1 84 0 5 942 209 268 0 18 chrX 46833553 46833610 -119816686 + GA-rich Low_complexity Low_complexity 4 59 0 5 942 216 293 37 0 chrX 46835619 46835701 -119814595 + MIRc SINE MIR 44 128 -140 5 942 197 231 162 0 chrX 46835738 46835812 -119814484 - MIRc SINE MIR -66 202 114 5 942 222 319 43 0 chrX 46836235 46836304 -119813992 + ID4_ SINE ID 5 76 -7 5 942 214 167 0 0 chrX 46836444 46836480 -119813816 + GA-rich Low_complexity Low_complexity 2 37 0 5 942 675 37 0 0 chrX 46836785 46836867 -119813429 + (TC)n Simple_repeat Simple_repeat 2 83 0 5 942 261 0 0 0 chrX 46836867 46836895 -119813401 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 942 1028 96 6 0 chrX 46840553 46840730 -119809566 + (GA)n Simple_repeat Simple_repeat 1 178 0 5 942 274 201 7 0 chrX 46840967 46841025 -119809271 - L2b LINE L2 -4 3383 3324 5 942 315 283 99 38 chrX 46841536 46841688 -119808608 + MIR3 SINE MIR 11 170 -38 5 942 220 333 45 36 chrX 46844725 46844837 -119805459 + L2c LINE L2 2825 2937 -482 5 942 210 410 28 42 chrX 46844929 46845143 -119805153 + L2c LINE L2 3154 3364 -23 5 942 460 207 8 8 chrX 46845646 46845763 -119804533 + CT-rich Low_complexity Low_complexity 4 120 0 5 942 427 238 29 21 chrX 46845797 46845945 -119804351 - L1M5 LINE L1 -554 5686 5539 5 942 302 0 0 26 chrX 46847895 46847934 -119802362 + (TC)n Simple_repeat Simple_repeat 2 39 0 5 942 288 0 0 0 chrX 46849434 46849466 -119800830 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 942 237 250 54 99 chrX 46851937 46852048 -119798248 + MARNA DNA Mariner 323 428 -158 5 942 947 137 228 5 chrX 46855123 46855307 -119794989 + URR1A DNA MER1_type 1 225 -1 5 942 271 354 115 7 chrX 46855744 46855892 -119794404 - MIR SINE MIR -33 229 66 5 942 958 241 49 80 chrX 46856802 46857090 -119793206 - RMER15 LTR ERVL -2 573 295 5 942 225 111 18 53 chrX 46857542 46857599 -119792697 - L1MD2 LINE L1 -4 6355 6301 5 942 1277 170 19 19 chrX 46857610 46857788 -119792508 + B3 SINE B2 1 179 -37 5 942 378 0 0 0 chrX 46857788 46857830 -119792466 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 942 1277 170 19 19 chrX 46857830 46857867 -119792429 + B3 SINE B2 180 216 0 5 942 220 279 51 111 chrX 46857917 46857940 -119792356 + ID SINE ID 67 82 -142 5 942 318 240 36 86 chrX 46857940 46858049 -119792247 + PB1D10 SINE Alu 2 113 -7 5 942 997 265 111 31 chrX 46858069 46858535 -119791761 - L1MD1 LINE L1 -60 6182 5648 5 942 1307 236 75 31 chrX 46858552 46858910 -119791386 + MTD LTR MaLR 36 409 -10 5 942 948 271 40 24 chrX 46858944 46859273 -119791023 - L1MD1 LINE L1 -693 5666 5333 5 942 355 246 177 15 chrX 46859259 46859519 -119790777 - L1MC LINE L1 -1197 4949 4648 5 942 367 236 115 5 chrX 46859707 46859899 -119790397 - L1MC LINE L1 -1533 4613 4401 5 942 492 180 90 38 chrX 46859890 46860023 -119790273 - Lx3B LINE L1 -3 6973 6834 5 942 6266 140 12 0 chrX 46860030 46860262 -119790034 - Lx3B LINE L1 -353 6620 6388 5 942 360 0 0 0 chrX 46860262 46860302 -119789994 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 942 6266 140 12 0 chrX 46860302 46861034 -119789262 - Lx3B LINE L1 -586 6387 5645 5 942 323 140 0 0 chrX 46861029 46861086 -119789210 - Lx3B LINE L1 -512 5374 5318 5 942 13812 110 21 7 chrX 46861086 46862729 -119787567 + L1_Mur1 LINE L1 2226 3867 -2019 5 942 297 0 0 0 chrX 46862729 46862762 -119787534 + (ATTAG)n Simple_repeat Simple_repeat 4 36 0 5 942 13812 152 20 44 chrX 46862762 46863709 -119786587 + L1_Mur1 LINE L1 3868 4655 -1228 5 942 3363 89 15 35 chrX 46863789 46864253 -119786043 - Lx3A LINE L1 -11 6970 6516 5 942 3963 117 50 29 chrX 46864257 46864923 -119785373 + Lx3_Mus LINE L1 5882 6561 -448 5 942 4601 149 11 6 chrX 46864984 46865713 -119784583 - Lx2 LINE L1 -6 6991 6259 5 942 302 50 25 0 chrX 46865713 46865753 -119784543 + Lx2 LINE L1 6208 6248 -749 5 942 4123 118 31 8 chrX 46865745 46866385 -119783911 + L1_Mur1 LINE L1 4650 5304 -582 5 942 757 296 116 43 chrX 46866541 46867345 -119782951 - L1MC LINE L1 -2072 4074 3213 5 942 1423 288 25 21 chrX 46867507 46867943 -119782353 + Lx9 LINE L1 6362 6799 -845 5 942 16374 90 11 7 chrX 46867946 46870964 -119779332 + L1Md_F LINE L1 392 3420 -2463 5 942 207 0 0 0 chrX 46871014 46871037 -119779259 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 942 7940 47 18 7 chrX 46871047 46872488 -119777808 - L1Md_F2 LINE L1 -12 6570 5123 5 942 1579 292 35 35 chrX 46872488 46873085 -119777211 + Lx9 LINE L1 6920 7516 -128 5 942 247 262 108 43 chrX 46873103 46873330 -119776966 + Lx8 LINE L1 5696 5930 -370 5 942 346 290 0 31 chrX 46873507 46873603 -119776693 + Lx8 LINE L1 7025 7117 -356 5 942 1876 149 32 71 chrX 46873767 46874107 -119776189 + ORR1A4 LTR MaLR 3 329 0 5 942 21 0 0 0 chrX 46874178 46874199 -119776097 + AT_rich Low_complexity Low_complexity 1 21 0 5 942 8940 101 7 28 chrX 46874745 46876954 -119773342 - L1_Mus1 LINE L1 0 6567 4457 5 942 11152 114 27 6 chrX 46876950 46879212 -119771084 - L1_Mus1 LINE L1 -3068 2815 503 5 942 293 288 124 0 chrX 46879231 46879488 -119770808 - L1MC LINE L1 -3015 3131 2843 5 942 11556 150 30 60 chrX 46879509 46880828 -119769468 + L1VL2 LINE L1 66 1335 -2280 5 942 1722 127 11 39 chrX 46880828 46881107 -119769189 + L1_Mus3 LINE L1 6367 6637 -1 5 942 11556 104 12 4 chrX 46881107 46882400 -119767896 + L1VL2 LINE L1 1336 2640 -975 5 942 9136 29 0 0 chrX 46882399 46884130 -119766166 - L1Md_T LINE L1 -2 6580 4849 5 942 16904 155 15 3 chrX 46884130 46884254 -119766042 + L1_Mus4 LINE L1 2928 3051 -2832 5 942 279 0 0 0 chrX 46884254 46884285 -119766011 + (CAA)n Simple_repeat Simple_repeat 3 33 0 5 942 16904 142 16 5 chrX 46884285 46887824 -119762472 + L1_Mus4 LINE L1 3052 6630 -6 5 942 232 258 16 0 chrX 46887826 46887888 -119762408 - L1MD LINE L1 -3337 2809 2747 5 942 1276 291 77 24 chrX 46887921 46888456 -119761840 - L1MC1 LINE L1 -33 6300 5738 5 942 239 226 159 16 chrX 46888451 46888514 -119761782 - L1MCa LINE L1 -3400 3164 3093 5 942 2353 148 16 0 chrX 46888672 46889058 -119761238 + ORR1B1 LTR MaLR 1 392 -2 5 942 796 104 103 15 chrX 46889304 46889440 -119760856 + L1Md_F2 LINE L1 6432 6579 -3 5 942 604 312 0 0 chrX 46889668 46889809 -119760487 + B3 SINE B2 1 141 -75 5 942 8657 106 11 1 chrX 46889824 46891781 -119758515 - L1_Mus2 LINE L1 0 6566 4591 5 942 180 97 0 0 chrX 46891799 46891830 -119758466 + (TTTTTG)n Simple_repeat Simple_repeat 5 35 0 5 942 4216 146 19 43 chrX 46891830 46893060 -119757236 - L1Md_F LINE L1 -2001 1816 630 5 942 402 198 0 193 chrX 46893121 46893240 -119757056 - L1VL1 LINE L1 -6296 126 31 5 942 1554 49 5 5 chrX 46893241 46893445 -119756851 + L1_Mus1 LINE L1 6360 6563 -4 5 942 460 256 0 0 chrX 46893486 46893572 -119756724 + B3 SINE B2 126 211 -5 5 942 1232 68 0 0 chrX 46893573 46893736 -119756560 + L1_Mus1 LINE L1 6405 6567 0 5 942 1050 296 150 18 chrX 46893931 46894785 -119755511 - L1MCa LINE L1 -4744 2007 1041 5 942 229 299 45 0 chrX 46895194 46895261 -119755035 - L1MCa LINE L1 -5800 951 882 5 942 225 0 0 0 chrX 46895435 46895460 -119754836 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 5 942 306 167 0 0 chrX 46895623 46895683 -119754613 + A-rich Low_complexity Low_complexity 1 60 0 5 942 1274 206 76 31 chrX 46895826 46896117 -119754179 + ORR1D1 LTR MaLR 5 308 -66 5 942 581 305 30 26 chrX 46896153 46896422 -119753874 - L1MCa LINE L1 -5718 327 58 5 942 291 331 55 30 chrX 46896708 46896873 -119753423 - Lx8 LINE L1 -233 7240 7072 5 942 935 148 471 30 chrX 46896875 46897142 -119753154 + ORR1C2 LTR MaLR 1 384 0 5 942 2125 283 66 48 chrX 46897156 46897872 -119752424 - Lx8 LINE L1 -413 7060 6332 5 942 333 288 0 27 chrX 46897931 46898006 -119752290 - ID2 SINE ID -2 81 9 5 942 521 312 18 18 chrX 46898056 46898219 -119752077 - RSINE1 SINE B4 0 165 3 5 942 626 257 53 42 chrX 46898222 46898561 -119751735 - L1MDb LINE L1 -1772 4634 4292 5 942 610 303 120 12 chrX 46899814 46900299 -119749997 - L1MDb LINE L1 -2456 3950 3414 5 942 386 312 179 3 chrX 46900349 46900645 -119749651 - L1MDb LINE L1 -2988 3418 3071 5 942 277 368 84 31 chrX 46900676 46900903 -119749393 - L1MDb LINE L1 -6110 299 61 5 942 664 299 54 7 chrX 46901011 46901291 -119749005 - L1MB8 LINE L1 -117 6061 5769 5 942 26 0 0 0 chrX 46901469 46901495 -119748801 + AT_rich Low_complexity Low_complexity 1 26 0 5 942 1188 114 23 0 chrX 46901638 46901813 -119748483 - B2_Mm2 SINE B2 -16 179 1 5 942 588 358 38 58 chrX 46901876 46902345 -119747951 - L1ME2 LINE L1 -108 6229 5770 5 942 1292 308 124 48 chrX 46902350 46902979 -119747317 - L1ME2 LINE L1 -1202 5117 4426 5 942 660 261 152 27 chrX 46902979 46903235 -119747061 + B4A SINE B4 5 292 0 5 942 1292 308 124 48 chrX 46903235 46903253 -119747043 - L1ME2 LINE L1 -1894 4425 4412 5 942 507 33 0 0 chrX 46903253 46903314 -119746982 + (TC)n Simple_repeat Simple_repeat 2 62 0 5 942 1292 308 124 48 chrX 46903314 46904900 -119745396 - L1ME2 LINE L1 -1908 4411 2713 5 942 318 260 146 5 chrX 46905024 46905229 -119745067 - L1ME2 LINE L1 -3930 2470 2237 5 942 28368 130 8 48 chrX 46905285 46906981 -119743315 + L1Md_F2 LINE L1 725 2310 -3573 5 942 1105 88 0 7 chrX 46906981 46907130 -119743166 - B1_Mus1 SINE Alu 0 148 1 5 942 28368 105 10 21 chrX 46907130 46910403 -119739893 + L1Md_F2 LINE L1 2311 5585 -298 5 942 7169 94 2 5 chrX 46910404 46911400 -119738896 + L1Md_F2 LINE L1 5587 6579 -3 5 942 219 139 0 0 chrX 46911442 46911478 -119738818 + (T)n Simple_repeat Simple_repeat 1 36 0 5 942 596 180 18 0 chrX 46911614 46911725 -119738571 + ORR1B1 LTR MaLR 1 113 -281 5 942 3778 47 17 0 chrX 46911743 46912214 -119738082 - L1Md_F3 LINE L1 0 6584 6106 5 942 5240 44 6 0 chrX 46912214 46912874 -119737422 + L1_Mm LINE L1 3393 4056 -1827 5 942 1838 149 24 10 chrX 46912874 46913166 -119737130 + ORR1B1 LTR MaLR 99 394 0 5 942 355 258 168 20 chrX 46913405 46913609 -119736687 - L1ME2 LINE L1 -4556 1859 1631 5 942 688 157 88 22 chrX 46914092 46914274 -119736022 - Lx9 LINE L1 -6 7638 7445 5 942 279 0 0 0 chrX 46914274 46914305 -119735991 + (T)n Simple_repeat Simple_repeat 1 31 0 5 942 37936 30 0 0 chrX 46914329 46920692 -119729604 - L1Md_T LINE L1 0 6585 126 5 942 1047 189 148 0 chrX 46920692 46920935 -119729361 - Lx9 LINE L1 -188 7456 7178 5 942 653 188 90 0 chrX 46920916 46921060 -119729236 + Lx9 LINE L1 7070 7226 -418 5 942 485 247 194 11 chrX 46921077 46921257 -119729039 - B3 SINE B2 -3 213 1 5 942 977 273 0 5 chrX 46921336 46921553 -119728743 - B3 SINE B2 0 216 1 5 942 7482 77 6 3 chrX 46922135 46923226 -119727070 + L1_Mus2 LINE L1 5471 6565 -1 5 942 421 144 87 0 chrX 46923286 46923390 -119726906 + Lx3_Mus LINE L1 6874 6986 -23 5 942 312 27 0 0 chrX 46923391 46923428 -119726868 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 5 943 1045 132 0 0 chrX 46924062 46924229 -119726067 - L1_Mm LINE L1 -1840 4043 3877 5 943 3881 180 13 3 chrX 46924230 46924981 -119725315 + L1_Mur2 LINE L1 4604 5362 -515 5 943 1554 131 25 0 chrX 46924978 46925215 -119725081 - Lx LINE L1 -498 6156 5914 5 943 3013 92 56 5 chrX 46925215 46925663 -119724633 + Lx LINE L1 6177 6647 -7 5 943 323 248 49 41 chrX 46925663 46925677 -119724619 - Lx4A LINE L1 -1143 5915 5904 5 943 435 52 0 0 chrX 46926180 46926238 -119724058 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 943 441 346 82 15 chrX 46926306 46926646 -119723650 - L1M5 LINE L1 -1510 4636 4274 5 943 1126 81 0 0 chrX 46926647 46926795 -119723501 + B1_Mus1 SINE Alu 1 148 0 5 943 239 282 165 37 chrX 46927311 46927499 -119722797 - L1MD2 LINE L1 -149 6210 5999 5 943 21 0 0 0 chrX 46927634 46927655 -119722641 + AT_rich Low_complexity Low_complexity 1 21 0 6 943 7787 157 26 7 chrX 46927655 46929539 -119720757 - Lx4B LINE L1 -17 7041 5107 6 943 2714 128 41 11 chrX 46929538 46930004 -119720292 + L1_Mur2 LINE L1 4195 4674 -1203 6 943 885 183 10 10 chrX 46930005 46930204 -119720092 - L1_Mur3 LINE L1 -497 5383 5185 6 943 897 55 0 45 chrX 46930206 46930340 -119719956 - L1Md_F3 LINE L1 -14 6570 6443 6 943 1686 53 0 0 chrX 46930340 46930547 -119719749 + L1Md_F3 LINE L1 6233 6439 -143 6 943 5584 214 116 30 chrX 46930544 46931467 -119718829 - L1_Mur3 LINE L1 -693 5187 4196 6 943 2269 119 14 11 chrX 46931467 46931831 -119718465 - L1_Mus3 LINE L1 0 6638 6274 6 943 5584 214 116 30 chrX 46931831 46932458 -119717838 - L1_Mur3 LINE L1 -1685 4195 3483 6 943 342 0 0 0 chrX 46932458 46932496 -119717800 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 6 943 5584 214 116 30 chrX 46932496 46932613 -119717683 - L1_Mur3 LINE L1 -2398 3482 3377 6 943 24 32 0 0 chrX 46932671 46932702 -119717594 + AT_rich Low_complexity Low_complexity 1 31 0 6 943 3868 147 1 12 chrX 46932708 46933362 -119716934 - Lx3B LINE L1 -9 6964 6318 6 943 4205 112 9 3 chrX 46933362 46934239 -119716057 - Lx3B LINE L1 -771 6202 5323 6 943 1218 63 6 0 chrX 46934228 46934386 -119715910 - L1Md_A LINE L1 -482 6100 5942 6 943 3082 60 2 20 chrX 46934386 46934792 -119715504 + L1Md_F3 LINE L1 6172 6570 -14 6 943 449 154 11 0 chrX 46934792 46934883 -119715413 - Lx3B LINE L1 -549 5337 5246 6 943 14156 62 3 2 chrX 46934884 46937399 -119712897 - L1Md_F2 LINE L1 -12 6570 4053 6 943 311 342 71 20 chrX 46937473 46937670 -119712626 - L1M4b LINE L1 -7117 217 11 6 943 235 378 33 12 chrX 46937687 46937931 -119712365 - L1M5 LINE L1 -1199 4947 4699 6 943 668 64 0 11 chrX 46938262 46938357 -119711939 + (TA)n Simple_repeat Simple_repeat 1 94 0 6 943 23 86 0 0 chrX 46938704 46938762 -119711534 + AT_rich Low_complexity Low_complexity 1 58 0 6 943 21 0 0 0 chrX 46938890 46938911 -119711385 + AT_rich Low_complexity Low_complexity 1 21 0 6 943 225 0 0 0 chrX 46938929 46938954 -119711342 + (TA)n Simple_repeat Simple_repeat 2 26 0 6 943 640 301 95 0 chrX 46939071 46939397 -119710899 - L1M5 LINE L1 -2155 3991 3635 6 943 1889 144 25 0 chrX 46939703 46940022 -119710274 + Lx2B LINE L1 5629 5955 -1045 6 943 317 245 77 28 chrX 46940007 46940150 -119710146 - L1M5 LINE L1 -3289 2857 2708 6 943 453 19 0 0 chrX 46940399 46940453 -119709843 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 943 1197 112 21 5 chrX 46941683 46941871 -119708425 - B2_Mm2 SINE B2 -4 191 1 6 943 662 191 7 0 chrX 46942164 46942305 -119707991 + (TA)n Simple_repeat Simple_repeat 2 143 0 6 943 1167 134 124 0 chrX 46942577 46942778 -119707518 - URR1A DNA MER1_type 0 226 1 6 943 739 188 0 21 chrX 46943039 46943180 -119707116 + B1_Mur2 SINE Alu 12 149 0 6 943 343 249 122 19 chrX 46944795 46945008 -119705288 - L1MD LINE L1 -2433 5562 5328 6 943 2254 218 40 13 chrX 46945135 46945678 -119704618 + Lx7 LINE L1 6804 7361 -335 6 943 434 221 0 0 chrX 46946034 46946111 -119704185 + B3A SINE B2 1 77 -121 6 943 291 54 0 0 chrX 46946155 46946192 -119704104 + (CAAT)n Simple_repeat Simple_repeat 4 40 0 6 943 996 220 82 82 chrX 46946268 46946762 -119703534 - RMER6A LTR ERVK -4 716 210 6 943 11419 160 116 60 chrX 46946784 46951092 -119699204 + L1Md_F LINE L1 192 4863 -1020 6 943 11592 63 1 0 chrX 46948994 46950596 -119699700 - L1_Mm LINE L1 -1589 4294 2691 6 943 225 281 38 76 chrX 46951092 46951223 -119699073 - MER72B LTR ERV1 -355 413 288 6 943 11419 160 116 60 chrX 46951223 46951888 -119698408 + L1Md_F LINE L1 4864 5586 -297 6 943 8221 43 1 1 chrX 46951888 46952883 -119697413 + L1Md_F2 LINE L1 5587 6581 -1 6 943 319 186 0 17 chrX 46952885 46952945 -119697351 - RMER6C LTR ERVK -613 143 85 6 943 597 206 97 28 chrX 46952920 46953065 -119697231 - RMER6C LTR ERVK -534 156 2 6 943 332 324 105 4 chrX 46953264 46953501 -119696795 - L1M5 LINE L1 -660 5580 5317 6 943 482 260 128 27 chrX 46953571 46953828 -119696468 - Lx8 LINE L1 -40 7433 7151 6 943 1092 273 21 24 chrX 46953888 46954218 -119696078 - Lx8 LINE L1 -518 6955 6627 6 943 1181 283 67 49 chrX 46954223 46954569 -119695727 - MTE2b LTR MaLR -20 359 8 6 943 1001 295 30 3 chrX 46954588 46954891 -119695405 - Lx8 LINE L1 -843 6630 6320 6 943 2354 111 17 0 chrX 46954893 46955253 -119695043 - Lx LINE L1 -334 6320 5955 6 943 278 54 0 0 chrX 46955557 46955594 -119694702 - tRNA-Gln-CAG tRNA tRNA -37 38 2 6 943 4091 225 112 33 chrX 46955599 46955669 -119694627 + Lx6 LINE L1 6229 6299 -1161 6 943 432 0 0 0 chrX 46955669 46955717 -119694579 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 943 4091 225 112 33 chrX 46955717 46956519 -119693777 + Lx6 LINE L1 6300 7184 -276 6 943 1114 188 127 46 chrX 46956519 46956826 -119693470 + IAPEY3_LTR LTR ERVK 1 332 0 6 943 4091 225 112 33 chrX 46956826 46957090 -119693206 + Lx6 LINE L1 7185 7455 -5 6 943 425 284 84 10 chrX 46957222 46957425 -119692871 - L1M5 LINE L1 -1228 4918 4701 6 943 331 286 13 13 chrX 46957894 46957972 -119692324 - ID4_ SINE ID 0 83 6 6 943 238 274 50 89 chrX 46958187 46958367 -119691929 - L1MA4 LINE L1 -361 5939 5767 6 943 922 269 32 25 chrX 46958409 46958782 -119691514 - L1MA4 LINE L1 -618 5682 5304 6 943 360 298 41 16 chrX 46959199 46959441 -119690855 - L1MA6 LINE L1 0 6300 6053 6 943 1547 55 0 0 chrX 46959447 46959649 -119690647 - L1Md_A LINE L1 0 6582 6381 6 943 180 0 0 0 chrX 46959649 46959669 -119690627 + (T)n Simple_repeat Simple_repeat 1 20 0 6 943 23 0 0 0 chrX 46959673 46959696 -119690600 + AT_rich Low_complexity Low_complexity 1 23 0 6 943 229 299 106 43 chrX 46959726 46959981 -119690315 + MER20B DNA MER1_type 437 707 -76 6 943 8534 8 0 2 chrX 46959981 46961261 -119689035 - L1Md_T LINE L1 -3 6579 5302 6 943 36252 31 0 0 chrX 46961261 46967207 -119683089 - L1Md_T LINE L1 0 6585 565 6 943 2393 52 0 0 chrX 46967207 46967512 -119682784 - L1Md_F2 LINE L1 -188 6394 6090 6 943 13533 24 0 0 chrX 46967512 46969369 -119680927 + L1Md_T LINE L1 4240 6096 -486 6 943 1016 271 141 56 chrX 46969372 46969559 -119680737 - L1MA8 LINE L1 -233 6058 5887 6 943 189 0 0 0 chrX 46969559 46969580 -119680716 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 6 943 1016 271 141 56 chrX 46969580 46969667 -119680629 - L1MA8 LINE L1 -405 5886 5794 6 943 360 0 0 0 chrX 46969667 46969707 -119680589 + (TATG)n Simple_repeat Simple_repeat 3 42 0 6 943 1016 271 141 56 chrX 46969707 46969819 -119680477 - L1MA8 LINE L1 -498 5793 5656 6 943 438 20 0 0 chrX 46969819 46969870 -119680426 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 943 1016 271 141 56 chrX 46969870 46970177 -119680119 - L1MA8 LINE L1 -636 5655 5307 6 943 448 353 22 15 chrX 46970178 46970313 -119679983 + RSINE1 SINE B4 2 137 -28 6 943 519 338 49 7 chrX 46970759 46970902 -119679394 + RSINE1 SINE B4 3 151 -14 6 943 339 85 0 0 chrX 46970959 46971006 -119679290 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 943 2757 182 32 28 chrX 46971096 46971661 -119678635 + Lx5 LINE L1 6479 7045 -5 6 943 871 289 0 31 chrX 46971758 46971983 -119678313 + B4 SINE B4 2 219 -73 6 943 950 211 153 26 chrX 46973530 46973959 -119676337 - MT2A LTR ERVL 0 533 1 6 943 183 395 18 35 chrX 46974277 46974390 -119675906 - L2b LINE L2 -215 3160 3050 6 943 423 0 0 0 chrX 46974900 46974947 -119675349 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 943 240 277 79 72 chrX 46975685 46975837 -119674459 + MIR SINE MIR 84 236 -26 6 943 816 252 0 52 chrX 46975857 46976125 -119674171 - L1_Mur2 LINE L1 -664 5213 4960 6 943 908 279 107 3 chrX 46976133 46976460 -119673836 + Lx6 LINE L1 7074 7434 -26 6 943 24 32 0 0 chrX 46976460 46976491 -119673805 + AT_rich Low_complexity Low_complexity 1 31 0 6 943 49 18 0 0 chrX 46977090 46977146 -119673150 + AT_rich Low_complexity Low_complexity 1 56 0 6 943 315 310 89 33 chrX 46977155 46977245 -119673051 - RSINE1 SINE B4 -2 163 69 6 943 232 322 78 9 chrX 46977423 46977539 -119672757 - L2b LINE L2 -799 2620 2497 6 943 236 389 47 12 chrX 46977529 46977692 -119672604 - MIR3 SINE MIR -33 175 3 6 943 260 344 32 53 chrX 46978081 46978271 -119672025 - L2a LINE L2 -25 3401 3216 6 943 759 312 95 0 chrX 46978272 46978525 -119671771 + MLT1B LTR MaLR 1 277 -113 6 943 751 315 14 50 chrX 46978563 46978927 -119671369 + L1MB5 LINE L1 5726 6076 -98 6 943 548 269 47 72 chrX 46978959 46979410 -119670886 - MLT2B1 LTR ERVL 0 562 1 6 943 476 362 62 62 chrX 46979523 46979973 -119670323 - L2a LINE L2 -619 2800 2347 6 943 1777 159 92 0 chrX 46979973 46980319 -119669977 - ORR1C1 LTR MaLR 0 378 1 6 943 476 362 62 62 chrX 46980319 46980380 -119669916 - L2a LINE L2 -1073 2346 2289 6 943 1150 69 7 0 chrX 46981363 46981508 -119668788 - B1_Mus2 SINE Alu -1 146 1 6 943 280 332 121 44 chrX 46981524 46981872 -119668424 - L2a LINE L2 -5 3382 3010 6 943 270 304 69 69 chrX 46981883 46982028 -119668268 - L2a LINE L2 -869 2550 2406 6 943 389 302 25 25 chrX 46982028 46982150 -119668146 + MTEb LTR MaLR 1 122 -257 6 943 992 234 129 47 chrX 46982160 46982658 -119667638 - RMER4B LTR ERVK -8 577 10 6 943 816 250 17 96 chrX 46982663 46982782 -119667514 + MTEb LTR MaLR 156 259 -120 6 943 234 0 0 0 chrX 46982782 46982808 -119667488 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 6 943 816 250 17 96 chrX 46982808 46982927 -119667369 + MTEb LTR MaLR 260 375 -4 6 943 183 339 16 56 chrX 46982931 46983056 -119667240 - L2a LINE L2 -1012 2407 2288 6 943 216 333 11 45 chrX 46983692 46983780 -119666516 + MIRc SINE MIR 70 154 -114 6 943 776 274 35 11 chrX 46984901 46985270 -119665026 + L1M2 LINE L1 4327 4704 -1439 6 943 1173 252 39 30 chrX 46985344 46985781 -119664515 + L1_Rod LINE L1 4640 5080 -767 6 943 1406 277 42 5 chrX 46985806 46986209 -119664087 + Lx9 LINE L1 6358 6775 -869 6 943 2417 281 101 32 chrX 46986339 46987437 -119662859 + Lx8 LINE L1 5791 6964 -509 6 943 1564 197 8 112 chrX 46987505 46987627 -119662669 - ORR1B1 LTR MaLR 0 394 283 6 943 4985 51 2 9 chrX 46987627 46988262 -119662034 - L1Md_F2 LINE L1 0 6582 5953 6 943 1564 197 8 112 chrX 46988262 46988522 -119661774 - ORR1B1 LTR MaLR -112 282 52 6 943 251 301 96 0 chrX 46988691 46988774 -119661522 + RSINE1 SINE B4 71 161 -4 6 943 342 122 0 0 chrX 46989496 46989545 -119660751 - ORR1B1 LTR MaLR -8 386 338 6 943 4658 89 2 0 chrX 46989574 46990203 -119660093 - L1_Mus1 LINE L1 -2 6565 5936 6 943 2246 233 74 5 chrX 46990203 46990782 -119659514 - Lx2 LINE L1 -150 6847 6229 6 943 4891 185 22 174 chrX 46990787 46991523 -119658773 + L1_Mus1 LINE L1 4387 5135 -745 6 943 910 149 7 0 chrX 46991523 46991664 -119658632 + B1_Mus1 SINE Alu 2 143 -5 6 943 4891 141 21 111 chrX 46991664 46992805 -119657491 + L1_Mus1 LINE L1 5136 6008 -559 6 943 3887 56 4 0 chrX 46992801 46993316 -119656980 + L1Md_F2 LINE L1 5254 5770 -113 6 943 9609 4 0 0 chrX 46993315 46994434 -119655862 + L1Md_A LINE L1 4468 5586 -297 6 943 9023 5 0 0 chrX 46994434 46995430 -119654866 + L1Md_A LINE L1 5587 6582 0 6 943 6513 36 5 8 chrX 46995427 46996216 -119654080 + L1Md_F2 LINE L1 5783 6569 -13 6 943 2131 75 14 0 chrX 46996216 46996508 -119653788 + L1_Mus1 LINE L1 6005 6300 -267 6 943 1469 194 39 133 chrX 46996508 46996840 -119653456 - ORR1B1 LTR MaLR -74 320 5 6 943 21 0 0 0 chrX 46996926 46996947 -119653349 + AT_rich Low_complexity Low_complexity 1 21 0 6 943 243 0 0 0 chrX 46997280 46997307 -119652989 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 943 6666 179 30 9 chrX 46998353 46999992 -119650304 - Lx5 LINE L1 -9 7041 5358 6 943 1890 152 19 6 chrX 47000000 47000364 -119649932 - L1_Mur2 LINE L1 -528 5349 4981 1 943 469 258 72 40 chrX 47001207 47001457 -119648839 - L1M5 LINE L1 -380 5799 5542 2 943 1748 320 38 6 chrX 47001495 47002186 -119648110 - Lx8 LINE L1 -322 7151 6439 3 943 238 332 65 52 chrX 47002384 47002510 -119647786 + L1M4 LINE L1 2880 3010 -3136 4 943 3902 68 0 0 chrX 47002510 47003008 -119647288 + L1Md_F2 LINE L1 6072 6569 -13 5 943 349 322 62 43 chrX 47003008 47003771 -119646525 + L1M4 LINE L1 3011 3781 -2365 4 943 25 31 0 0 chrX 47003860 47003892 -119646404 + AT_rich Low_complexity Low_complexity 1 32 0 6 943 813 322 67 50 chrX 47003980 47004340 -119645956 + MLT1D LTR MaLR 115 480 -25 7 943 961 259 61 19 chrX 47004349 47004726 -119645570 - L1_Mur3 LINE L1 -321 5559 5167 8 943 2548 199 98 43 chrX 47004729 47005228 -119645068 + RMER6C LTR ERVK 3 527 -163 9 943 4465 103 6 21 chrX 47005228 47005893 -119644403 + L1Md_F2 LINE L1 5927 6581 -1 1 943 351 0 0 0 chrX 47005897 47005936 -119644360 + (GAA)n Simple_repeat Simple_repeat 2 40 0 1 943 2548 199 98 43 chrX 47005936 47006083 -119644213 + RMER6C LTR ERVK 528 690 0 9 943 1707 264 141 12 chrX 47006086 47006525 -119643771 - L1_Mur3 LINE L1 -723 5157 4627 8 943 426 20 0 0 chrX 47006525 47006576 -119643720 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 943 1707 264 141 12 chrX 47006576 47006999 -119643297 - L1_Mur3 LINE L1 -1254 4626 4183 8 943 686 216 18 23 chrX 47006997 47007168 -119643128 + L1_Mur3 LINE L1 3726 3895 -1985 1 943 8634 144 14 7 chrX 47007192 47008870 -119641426 - Lx4A LINE L1 -2 7056 5362 1 943 568 258 120 10 chrX 47008866 47009066 -119641230 + L1_Mur3 LINE L1 3907 4128 -1752 1 943 25 65 0 0 chrX 47009096 47009142 -119641154 + AT_rich Low_complexity Low_complexity 1 46 0 1 943 232 286 0 16 chrX 47009254 47009318 -119640978 - Lx8 LINE L1 -237 7236 7174 1 943 519 269 7 0 chrX 47009422 47009571 -119640725 + Lx9 LINE L1 7322 7471 -173 1 943 3141 251 44 21 chrX 47009666 47010531 -119639765 - Lx5 LINE L1 -105 6945 6061 1 943 3298 195 19 52 chrX 47010525 47011060 -119639236 - L1_Mur2 LINE L1 -494 5383 4851 1 943 732 77 0 0 chrX 47011060 47011164 -119639132 + (TTTC)n Simple_repeat Simple_repeat 1 104 0 2 943 3298 195 19 52 chrX 47011164 47011468 -119638828 - L1_Mur2 LINE L1 -1027 4850 4572 1 943 14443 77 4 6 chrX 47011471 47013542 -119636754 + L1Md_F2 LINE L1 2530 4599 -1284 2 943 3348 69 23 0 chrX 47013542 47013979 -119636317 + L1Md_F3 LINE L1 6124 6570 -14 2 943 14443 164 2 199 chrX 47013979 47015719 -119634577 + L1Md_F2 LINE L1 4600 5589 -297 2 943 7271 76 10 5 chrX 47015720 47016699 -119633597 + L1Md_F2 LINE L1 5588 6571 -11 2 943 799 176 13 0 chrX 47016703 47016856 -119633440 - L1_Mur2 LINE L1 -1293 4584 4430 1 943 207 0 0 0 chrX 47017162 47017185 -119633111 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 2 943 1104 115 0 0 chrX 47017186 47017343 -119632953 - B2_Mm2 SINE B2 -37 158 2 2 943 294 238 214 0 chrX 47017463 47017547 -119632749 - Lx8 LINE L1 -970 6503 6402 2 943 2209 204 127 5 chrX 47017543 47018164 -119632132 + Lx9 LINE L1 6943 7639 -5 2 943 736 343 61 18 chrX 47018246 47018525 -119631771 + B4 SINE B4 2 292 0 2 943 579 164 0 0 chrX 47018525 47018629 -119631667 + (TA)n Simple_repeat Simple_repeat 1 104 0 2 943 22 70 0 0 chrX 47018686 47018729 -119631567 + AT_rich Low_complexity Low_complexity 1 43 0 2 943 8005 29 3 0 chrX 47018748 47020260 -119630036 - L1Md_A LINE L1 -1 6581 5065 3 943 397 261 172 46 chrX 47020276 47020584 -119629712 - L1MCc LINE L1 -4525 2512 2073 3 943 2916 162 41 0 chrX 47020584 47021091 -119629205 - Lx4A LINE L1 -2 7056 6529 3 943 335 293 165 57 chrX 47021091 47021396 -119628900 - L1MCc LINE L1 -4950 2072 1702 3 943 4966 32 8 5 chrX 47021396 47021994 -119628302 - L1Md_F3 LINE L1 -1 6583 5984 3 943 386 310 91 46 chrX 47021994 47022294 -119628002 - L1MCc LINE L1 -5427 1701 1335 3 943 782 324 98 42 chrX 47022326 47022925 -119627371 - L1MCc LINE L1 -5141 1282 650 3 943 187 469 0 0 chrX 47023384 47023482 -119626814 + MIRb SINE MIR 9 106 -162 3 943 194 158 26 0 chrX 47024769 47024807 -119625489 + MIR3 SINE MIR 162 200 -8 3 943 316 311 44 29 chrX 47026376 47026512 -119623784 + MIRb SINE MIR 123 260 -8 3 943 339 85 0 0 chrX 47026516 47026563 -119623733 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 3 943 393 22 0 0 chrX 47026930 47026976 -119623320 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 943 209 295 62 70 chrX 47027056 47027205 -119623091 + MIRb SINE MIR 105 242 -20 3 943 194 380 0 9 chrX 47027895 47028004 -119622292 + MIR SINE MIR 88 195 -67 4 943 182 128 0 25 chrX 47029059 47029099 -119621197 + CT-rich Low_complexity Low_complexity 4 42 0 4 943 549 0 0 0 chrX 47029770 47029831 -119620465 + (TAAAA)n Simple_repeat Simple_repeat 2 62 0 4 943 540 45 0 0 chrX 47029855 47029922 -119620374 + (TG)n Simple_repeat Simple_repeat 1 67 0 4 943 325 304 57 81 chrX 47030669 47030885 -119619411 - MIRc SINE MIR -24 244 34 4 943 189 234 0 0 chrX 47031171 47031235 -119619061 + CT-rich Low_complexity Low_complexity 2 65 0 4 943 504 0 0 0 chrX 47031238 47031294 -119619002 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 943 962 279 45 42 chrX 47031960 47032387 -119617909 - Charlie2b DNA MER1_type -58 2724 2297 4 943 189 253 104 26 chrX 47032407 47032484 -119617812 - MIR SINE MIR -179 83 1 4 943 228 317 51 82 chrX 47032526 47032684 -119617612 - Charlie2b DNA MER1_type -2532 250 98 4 943 525 291 55 31 chrX 47032719 47032882 -119617414 - MER20 DNA MER1_type -16 203 37 4 943 536 271 15 15 chrX 47033806 47033937 -119616359 - RSINE1 SINE B4 -31 134 4 5 943 226 349 24 0 chrX 47034267 47034350 -119615946 - L2a LINE L2 -35 3391 3307 5 943 637 281 46 0 chrX 47035123 47035276 -119615020 + RSINE1 SINE B4 1 160 -5 5 943 285 364 20 34 chrX 47035469 47035617 -119614679 - MIR SINE MIR -106 156 11 5 943 228 298 0 0 chrX 47038286 47038343 -119611953 - Lx8 LINE L1 -874 6599 6543 5 943 1863 294 81 22 chrX 47038344 47039160 -119611136 + Lx8 LINE L1 6608 7471 -2 5 943 737 300 30 15 chrX 47039182 47039446 -119610850 - Lx8 LINE L1 -229 7244 6977 5 943 3447 184 17 14 chrX 47039457 47040272 -119610024 - Lx5 LINE L1 -739 6311 5494 5 943 1777 184 82 6 chrX 47040270 47040626 -119609670 + Lx5 LINE L1 6663 7045 -5 5 943 1216 273 152 14 chrX 47040649 47041084 -119609212 - Lx8 LINE L1 -717 6756 6262 5 943 326 300 0 0 chrX 47041106 47041196 -119609100 + BC1_Mm scRNA scRNA 1 90 -62 5 943 188 262 134 24 chrX 47041817 47041899 -119608397 - L2a LINE L2 0 3426 3336 5 943 244 346 37 37 chrX 47042246 47042354 -119607942 + L2c LINE L2 3258 3365 -22 6 943 578 14 14 0 chrX 47042692 47042763 -119607533 + (GA)n Simple_repeat Simple_repeat 1 72 0 6 943 664 372 133 22 chrX 47043320 47044140 -119606156 - L2 LINE L2 -352 3067 2157 6 943 352 350 77 66 chrX 47044758 47044954 -119605342 - L2c LINE L2 -13 3374 3177 6 943 482 289 75 60 chrX 47044964 47045163 -119605133 + MLT1B LTR MaLR 11 212 -178 6 943 240 241 23 0 chrX 47045173 47045260 -119605036 - L1MC3 LINE L1 -1126 6659 6571 6 943 270 0 0 0 chrX 47045274 47045304 -119604992 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 943 238 321 149 9 chrX 47045305 47045412 -119604884 + MLT1B LTR MaLR 257 378 -89 6 943 291 342 43 80 chrX 47045449 47045611 -119604685 - L2c LINE L2 -204 3183 3028 6 943 2443 146 38 0 chrX 47046562 47046980 -119603316 + Lx4A LINE L1 5328 5761 -116 6 943 36404 14 3 7 chrX 47046991 47052789 -119597507 + L1Md_A LINE L1 1 5586 -297 6 943 8807 16 0 0 chrX 47052789 47053785 -119596511 + L1Md_A LINE L1 5587 6582 0 6 943 231 88 0 0 chrX 47053791 47053825 -119596471 + (A)n Simple_repeat Simple_repeat 1 34 0 6 943 1074 128 35 15 chrX 47053837 47053934 -119596362 + Lx4A LINE L1 5790 5885 -1173 6 943 1707 154 7 0 chrX 47053934 47054219 -119596077 + L1_Mus3 LINE L1 6346 6632 -6 7 943 1074 128 35 15 chrX 47054219 47054319 -119595977 + Lx4A LINE L1 5886 5991 -1067 6 943 2016 33 0 8 chrX 47054342 47054587 -119595709 + L1Md_F3 LINE L1 6330 6572 -12 7 943 865 152 12 42 chrX 47054592 47054757 -119595539 + B2_Mm2 SINE B2 27 186 -9 7 944 1472 115 4 22 chrX 47054869 47055136 -119595160 + Lx4A LINE L1 5974 6235 -823 6 944 390 21 0 0 chrX 47055318 47055365 -119594931 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 944 510 17 0 0 chrX 47055879 47055938 -119594358 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 944 204 179 0 0 chrX 47056061 47056100 -119594196 + CT-rich Low_complexity Low_complexity 3 41 0 7 944 225 0 0 0 chrX 47056171 47056196 -119594100 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 944 351 0 0 0 chrX 47056196 47056234 -119594062 + (GA)n Simple_repeat Simple_repeat 2 40 0 7 944 341 393 6 23 chrX 47056469 47056646 -119593650 - Tigger15a DNA TcMar -181 534 361 7 944 194 318 180 28 chrX 47057619 47057797 -119592499 - MIRb SINE MIR -27 241 37 7 944 29138 134 8 34 chrX 47057891 47064421 -119585875 + L1_Mus1 LINE L1 280 6567 0 8 944 7927 55 1 0 chrX 47064984 47066613 -119583683 - L1Md_F2 LINE L1 -1 6581 4950 8 944 389 20 0 39 chrX 47066605 47066656 -119583640 + L1_Mm LINE L1 3495 3543 -2340 8 944 17525 87 5 244 chrX 47066653 47069400 -119580896 + L1Md_F LINE L1 527 2612 -3271 8 944 8301 38 1 0 chrX 47069400 47070395 -119579901 + L1Md_T LINE L1 5587 6582 0 8 944 17525 77 6 298 chrX 47070395 47072269 -119578027 + L1Md_F LINE L1 2613 3556 -2327 8 944 7851 59 2 2 chrX 47072269 47073253 -119577043 + L1Md_F2 LINE L1 5587 6570 -12 8 944 17525 77 6 298 chrX 47073253 47074664 -119575632 + L1Md_F LINE L1 3557 4937 -946 8 944 671 208 0 15 chrX 47074684 47074816 -119575480 + B3 SINE B2 1 130 -86 8 944 191 363 17 17 chrX 47076135 47076250 -119574046 - L2a LINE L2 0 3426 3312 8 944 310 333 0 11 chrX 47076434 47076525 -119573771 + B1F1 SINE Alu 3 92 -57 8 944 4005 118 94 5 chrX 47076725 47077381 -119572915 - Lx LINE L1 -8 6646 5932 8 944 1840 106 11 0 chrX 47077381 47077654 -119572642 + Lx LINE L1 5691 5966 -670 8 944 285 210 0 0 chrX 47078593 47078655 -119571641 + (TA)n Simple_repeat Simple_repeat 1 62 0 9 944 354 169 0 0 chrX 47078716 47078781 -119571515 + (TA)n Simple_repeat Simple_repeat 1 65 0 9 944 603 0 0 0 chrX 47079680 47079747 -119570549 + (TC)n Simple_repeat Simple_repeat 2 68 0 9 944 842 296 52 111 chrX 47081280 47081579 -119568717 - ORR1E LTR MaLR -10 349 73 9 944 1169 54 0 0 chrX 47081579 47081728 -119568568 - L1Md_F2 LINE L1 -14 6568 6420 9 944 842 296 52 111 chrX 47081728 47081797 -119568499 - ORR1E LTR MaLR -287 72 4 9 944 271 311 70 70 chrX 47082273 47082401 -119567895 - MamSINE1 SINE tRNA -4 286 159 9 944 801 144 181 62 chrX 47083374 47083485 -119566811 - URR1A DNA MER1_type -5 221 111 9 944 4770 79 2 6 chrX 47083485 47084120 -119566176 + L1_Mus1 LINE L1 5936 6567 0 9 944 801 144 181 62 chrX 47084120 47084201 -119566095 - URR1A DNA MER1_type -116 110 6 9 944 474 18 0 0 chrX 47084723 47084778 -119565518 + (TC)n Simple_repeat Simple_repeat 1 55 0 9 944 250 321 132 0 chrX 47085147 47085253 -119565043 + Tigger10 DNA Tigger 1687 1806 -37 9 944 301 145 16 16 chrX 47086676 47086739 -119563557 + Lx7 LINE L1 7634 7696 0 9 944 1168 186 23 5 chrX 47087386 47087602 -119562694 - URR1B DNA MER1_type -1 224 5 1 944 325 307 55 80 chrX 47087635 47087798 -119562498 + MIRb SINE MIR 19 177 -91 1 944 229 394 89 18 chrX 47089480 47089705 -119560591 + MIR SINE MIR 21 261 -1 1 944 227 362 78 7 chrX 47090806 47090948 -119559348 - L2 LINE L2 -550 2869 2718 1 944 431 267 0 15 chrX 47092218 47092355 -119557941 - Lx9 LINE L1 -8 7636 7502 1 944 423 0 0 0 chrX 47092387 47092434 -119557862 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 944 287 260 133 20 chrX 47092467 47092565 -119557731 - B3 SINE B2 -104 112 4 1 944 42 0 0 0 chrX 47092709 47092751 -119557545 + AT_rich Low_complexity Low_complexity 1 42 0 1 944 333 319 8 17 chrX 47093235 47093353 -119556943 - MIRb SINE MIR -73 195 79 1 944 496 359 24 35 chrX 47093912 47094166 -119556130 - MLT1D LTR MaLR -190 315 65 1 944 435 118 0 0 chrX 47094486 47094562 -119555734 + (TC)n Simple_repeat Simple_repeat 1 76 0 1 944 3662 30 0 0 chrX 47094711 47095141 -119555155 + L1Md_F2 LINE L1 5157 5586 -297 1 944 8166 38 3 5 chrX 47095141 47096139 -119554157 + L1Md_F2 LINE L1 5587 6582 0 1 944 257 307 90 52 chrX 47096701 47096835 -119553461 + L4 LINE RTE 1629 1767 -262 1 944 198 0 0 0 chrX 47097022 47097044 -119553252 + (A)n Simple_repeat Simple_repeat 1 22 0 1 944 234 207 34 17 chrX 47097426 47097485 -119552811 + L4 LINE RTE 1770 1829 -200 1 944 183 374 20 20 chrX 47100445 47100546 -119549750 - MIRb SINE MIR -130 138 38 1 944 1507 40 40 0 chrX 47102401 47102600 -119547696 + L1Md_F2 LINE L1 6375 6581 -1 1 944 867 157 7 0 chrX 47102705 47102845 -119547451 - B1_Mus1 SINE Alu -2 146 6 1 944 5190 50 5 0 chrX 47102892 47103531 -119546765 - L1_Mus1 LINE L1 0 6567 5926 1 944 753 55 27 0 chrX 47103539 47103649 -119546647 - L1Md_F3 LINE L1 -15 6569 6457 1 944 1541 59 0 5 chrX 47103649 47103852 -119546444 - L1_Mus1 LINE L1 -640 5926 5725 1 944 411 285 48 23 chrX 47104592 47104724 -119545572 + MIR SINE MIR 30 163 -99 1 944 440 96 24 0 chrX 47105017 47105100 -119545196 + (TCTCTG)n Simple_repeat Simple_repeat 2 86 0 1 944 369 0 0 0 chrX 47105101 47105142 -119545154 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 944 228 304 36 0 chrX 47105162 47105218 -119545078 - RSINE1 SINE B4 -105 60 3 1 944 331 328 31 26 chrX 47105894 47106085 -119544211 - B3A SINE B2 -5 193 2 1 944 395 370 63 36 chrX 47106225 47106528 -119543768 - L1M6 LINE L1 -1199 5201 4891 1 944 12518 72 2 2 chrX 47106736 47109091 -119541205 - L1Md_F2 LINE L1 -1 6581 4228 1 944 6493 91 5 2 chrX 47109077 47109998 -119540298 + L1_Mm LINE L1 3504 4427 -1456 1 944 408 343 39 10 chrX 47110209 47110415 -119539881 - L1M6 LINE L1 -1947 4453 4242 1 944 301 295 60 9 chrX 47110654 47110821 -119539475 + Helitron1Nb_Mam RC Helitron 367 550 -512 1 944 544 329 45 29 chrX 47111009 47111523 -119538773 - L1M6 LINE L1 -2204 4190 3617 1 944 1742 70 22 0 chrX 47112169 47112399 -119537897 - ORR1A2 LTR MaLR 0 327 93 1 944 5787 92 27 2 chrX 47112412 47113752 -119536544 - L1_Mus1 LINE L1 -1 6566 5196 1 944 615 73 104 0 chrX 47113753 47113849 -119536447 - ORR1A2 LTR MaLR -221 106 1 1 944 3181 45 48 0 chrX 47114478 47114857 -119535439 + L1_Mus3 LINE L1 6235 6631 -7 1 944 227 282 115 28 chrX 47115037 47115219 -119535077 - L1M6 LINE L1 -4545 1951 1754 1 944 277 260 50 43 chrX 47115486 47115647 -119534649 - L1MA5 LINE L1 -5 6295 6134 1 944 3176 197 73 24 chrX 47116806 47117217 -119533079 + Lx9 LINE L1 6869 7311 -333 1 944 414 0 0 0 chrX 47117217 47117263 -119533033 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 944 3176 197 73 24 chrX 47117263 47117589 -119532707 + Lx9 LINE L1 7312 7641 -3 1 944 21 0 0 0 chrX 47117648 47117669 -119532627 + AT_rich Low_complexity Low_complexity 1 21 0 1 944 314 271 126 26 chrX 47119071 47119270 -119531026 + MIR SINE MIR 46 260 -2 1 944 367 276 36 22 chrX 47120560 47120574 -119529722 - HAL1-2a_MD LINE L1 -519 2505 2492 1 944 486 0 0 0 chrX 47120574 47120628 -119529668 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 944 367 276 36 22 chrX 47120628 47120750 -119529546 - HAL1-2a_MD LINE L1 -533 2491 2367 1 944 183 323 16 0 chrX 47121157 47121219 -119529077 - MIRm SINE MIR -1 275 213 1 944 880 147 20 27 chrX 47121766 47121913 -119528383 + B1_Mur4 SINE Alu 5 150 0 1 944 320 312 76 76 chrX 47121946 47122171 -119528125 + L1MC LINE L1 5521 5748 -376 1 944 432 130 0 0 chrX 47122177 47122246 -119528050 + (GA)n Simple_repeat Simple_repeat 2 70 0 1 944 280 254 25 8 chrX 47122314 47122433 -119527863 + (TA)n Simple_repeat Simple_repeat 1 121 0 1 944 311 280 10 70 chrX 47122824 47122924 -119527372 + B3A SINE B2 105 198 0 1 944 537 326 0 21 chrX 47122965 47123106 -119527190 + B1F SINE Alu 10 147 -2 1 944 376 296 239 10 chrX 47123678 47123879 -119526417 + MIRb SINE MIR 16 262 -6 1 944 345 250 15 0 chrX 47124624 47124714 -119525582 - MIR SINE MIR -89 179 84 1 944 259 307 108 73 chrX 47124989 47125193 -119525103 - MIR SINE MIR 0 262 52 1 944 311 198 0 11 chrX 47125307 47125381 -119524915 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 944 375 23 0 0 chrX 47125381 47125425 -119524871 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 944 311 198 0 11 chrX 47125425 47125442 -119524854 + (TA)n Simple_repeat Simple_repeat 1 17 0 1 944 232 177 28 210 chrX 47125612 47125701 -119524595 - L1MA6 LINE L1 -106 6194 6122 1 944 218 32 0 31 chrX 47125701 47125733 -119524563 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 1 944 232 177 28 210 chrX 47125733 47125786 -119524510 - L1MA6 LINE L1 -179 6121 6078 1 944 665 255 10 7 chrX 47127205 47127346 -119522950 - ID_B1 SINE B4 -74 218 74 1 944 191 336 154 21 chrX 47127418 47127561 -119522735 - MER5B DNA MER1_type -5 173 12 1 944 528 326 45 36 chrX 47128010 47128233 -119522063 + L3 LINE CR1 3086 3310 -1179 1 944 31 0 0 0 chrX 47128636 47128667 -119521629 + AT_rich Low_complexity Low_complexity 1 31 0 1 944 346 221 140 0 chrX 47129198 47129295 -119521001 + MTEb LTR MaLR 265 414 -5 1 944 1276 184 4 22 chrX 47129479 47129707 -119520589 + URR1A DNA MER1_type 3 226 0 1 944 25 31 0 0 chrX 47130134 47130166 -119520130 + AT_rich Low_complexity Low_complexity 1 32 0 1 944 554 301 21 21 chrX 47130749 47130936 -119519360 + MIR SINE MIR 2 188 -74 1 944 1050 268 71 63 chrX 47131121 47131471 -119518825 - MTEa LTR MaLR 0 379 27 1 944 284 338 28 35 chrX 47131764 47131905 -119518391 + L3 LINE CR1 3765 3904 -585 1 944 776 354 116 13 chrX 47132189 47132939 -119517357 + L2a LINE L2 2588 3417 -9 1 944 474 18 0 0 chrX 47133311 47133366 -119516930 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 944 504 95 0 0 chrX 47134169 47134253 -119516043 + (TC)n Simple_repeat Simple_repeat 1 84 0 1 944 349 20 40 0 chrX 47134253 47134303 -119515993 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 944 275 282 0 0 chrX 47138713 47138784 -119511512 - L1M5 LINE L1 -252 5872 5802 1 944 260 283 29 29 chrX 47139708 47139810 -119510486 + MIRc SINE MIR 116 217 -51 1 944 312 27 0 0 chrX 47144386 47144423 -119505873 + (TAA)n Simple_repeat Simple_repeat 3 39 0 1 944 549 176 131 7 chrX 47146148 47146285 -119504011 - MIR SINE MIR -2 260 107 1 944 296 294 77 0 chrX 47146287 47146406 -119503890 - MIR SINE MIR -90 178 48 1 944 342 100 0 0 chrX 47146760 47146810 -119503486 + L2a LINE L2 3375 3424 -2 1 944 308 400 68 6 chrX 47146818 47146979 -119503317 - Tigger12c DNA MER2_type -507 227 57 1 944 248 281 11 58 chrX 47151376 47151463 -119498833 - MIRb SINE MIR -82 186 104 1 944 420 319 95 27 chrX 47151488 47151710 -119498586 + MIRb SINE MIR 23 259 -9 1 944 371 327 77 84 chrX 47151854 47152128 -119498168 - B4A SINE B4 -16 276 5 1 944 251 329 62 28 chrX 47152161 47152305 -119497991 - Charlie14a DNA MER1_type -54 1110 962 1 944 233 336 45 18 chrX 47152380 47152492 -119497804 - Charlie14a DNA MER1_type -909 255 141 1 944 332 211 30 40 chrX 47152507 47152606 -119497690 + MIR SINE MIR 92 189 -73 1 944 465 252 80 80 chrX 47153019 47153157 -119497139 - B1_Mur1 SINE Alu -3 146 9 1 944 420 279 108 29 chrX 47153196 47153388 -119496908 - MIR SINE MIR -35 233 18 1 944 408 40 0 0 chrX 47154021 47154071 -119496225 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 944 1071 224 39 28 chrX 47154392 47154677 -119495619 + Lx6 LINE L1 7135 7422 -38 1 944 22 35 0 0 chrX 47154733 47154762 -119495534 + AT_rich Low_complexity Low_complexity 1 29 0 1 944 768 136 0 0 chrX 47156747 47156872 -119493424 + (TCC)n Simple_repeat Simple_repeat 3 127 0 1 944 1946 62 4 12 chrX 47156899 47157143 -119493153 - L1Md_F2 LINE L1 -4 6578 6337 1 944 2917 61 0 0 chrX 47157143 47157504 -119492792 + L1_Mm LINE L1 4673 5033 -850 1 944 836 48 16 16 chrX 47157504 47157632 -119492664 + (TTC)n Simple_repeat Simple_repeat 1 128 0 1 944 476 233 0 0 chrX 47157639 47157725 -119492571 - PB1D10 SINE Alu -19 98 13 1 944 2065 121 28 16 chrX 47158271 47158589 -119491707 - RLTRETN_Mm LTR ERVK 0 322 1 1 944 7047 40 6 13 chrX 47158782 47159644 -119490652 - L1Md_F2 LINE L1 0 6582 5727 1 944 547 52 188 0 chrX 47160023 47160119 -119490177 + L1Md_F3 LINE L1 6469 6582 -2 1 944 330 312 7 74 chrX 47160705 47160854 -119489442 + MIRc SINE MIR 18 156 -112 1 944 23 0 0 0 chrX 47162198 47162221 -119488075 + AT_rich Low_complexity Low_complexity 1 23 0 1 944 24 0 0 0 chrX 47163703 47163727 -119486569 + AT_rich Low_complexity Low_complexity 1 24 0 1 944 227 48 167 0 chrX 47163923 47163965 -119486331 + L1Md_F2 LINE L1 6534 6582 0 1 944 18645 148 25 7 chrX 47163970 47168692 -119481604 - L1_Mus4 LINE L1 0 6636 1858 1 944 3013 26 0 11 chrX 47168692 47169042 -119481254 - ORR1A0 LTR MaLR 0 346 1 1 944 13139 54 16 3 chrX 47169042 47170458 -119479838 - ORR1A0-int LTR MaLR 0 1792 365 1 944 1729 28 9 9 chrX 47170458 47170675 -119479621 - L1Md_F3 LINE L1 0 6584 6368 1 944 13139 54 16 3 chrX 47170675 47171028 -119479268 - ORR1A0-int LTR MaLR -1428 364 1 1 944 2795 18 41 24 chrX 47171028 47171368 -119478928 - ORR1A0 LTR MaLR 0 346 1 1 944 4147 138 14 11 chrX 47171369 47172668 -119477628 - L1VL4 LINE L1 -2067 1492 194 1 944 672 300 107 11 chrX 47173048 47173311 -119476985 + Lx8 LINE L1 7177 7464 -9 1 944 1250 109 16 21 chrX 47173445 47173633 -119476663 - B2_Mm2 SINE B2 -8 187 1 2 944 21 0 0 0 chrX 47173654 47173675 -119476621 + AT_rich Low_complexity Low_complexity 1 21 0 2 944 237 65 0 0 chrX 47173729 47173760 -119476536 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 944 255 254 0 0 chrX 47174394 47174453 -119475843 + T-rich Low_complexity Low_complexity 1 59 0 2 944 487 368 36 16 chrX 47175920 47176285 -119474011 + L3 LINE CR1 3726 4097 -392 2 944 229 51 0 49 chrX 47176595 47176636 -119473660 + (CACCC)n Simple_repeat Simple_repeat 5 43 0 2 944 576 237 35 81 chrX 47177748 47177969 -119472327 + L1ME1 LINE L1 5674 5885 -299 2 944 20072 163 68 9 chrX 47178392 47183683 -119466613 + Lx LINE L1 561 6175 -479 2 944 3427 23 5 0 chrX 47183683 47184077 -119466219 + MTA_Mm LTR MaLR 1 396 0 2 944 6713 127 32 7 chrX 47184077 47184532 -119465764 + Lx LINE L1 6176 6650 -4 2 944 342 384 43 60 chrX 47184610 47184790 -119465506 + L1ME1 LINE L1 5860 6042 -137 2 944 5307 20 0 0 chrX 47184790 47185401 -119464895 - L1Md_A LINE L1 0 6582 5972 2 944 342 384 43 60 chrX 47185401 47185519 -119464777 + L1ME1 LINE L1 6043 6153 -26 2 945 297 299 89 45 chrX 47185922 47186034 -119464262 - MIRm SINE MIR 0 276 160 2 945 25 51 0 0 chrX 47186783 47186822 -119463474 + AT_rich Low_complexity Low_complexity 1 39 0 2 945 1341 208 0 11 chrX 47186877 47187144 -119463152 + L1_Rod LINE L1 5584 5847 0 2 945 486 0 0 0 chrX 47187268 47187322 -119462974 + (TC)n Simple_repeat Simple_repeat 1 54 0 2 945 643 286 54 8 chrX 47187322 47187562 -119462734 - Lx9 LINE L1 -152 7492 7242 2 945 491 213 58 109 chrX 47187589 47187763 -119462533 + Lx9 LINE L1 7038 7202 -442 2 945 230 350 60 30 chrX 47188059 47188227 -119462069 - L3 LINE CR1 -24 4465 4293 2 945 23 33 0 0 chrX 47188297 47188327 -119461969 + AT_rich Low_complexity Low_complexity 1 30 0 2 945 266 406 20 71 chrX 47188327 47188579 -119461717 - L3 LINE CR1 -358 4131 3893 2 945 1000 278 59 14 chrX 47188855 47189143 -119461153 + MLT1A LTR MaLR 1 301 -73 2 945 342 276 123 39 chrX 47189509 47189890 -119460406 - L1MCa LINE L1 -4899 1609 1197 2 945 210 91 0 0 chrX 47190016 47190049 -119460247 + (TAGA)n Simple_repeat Simple_repeat 4 36 0 2 945 321 26 0 0 chrX 47190073 47190111 -119460185 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 2 945 481 224 26 8 chrX 47190138 47190255 -119460041 + B1_Mur4 SINE Alu 32 150 0 2 945 440 312 59 77 chrX 47190257 47190597 -119459699 + L1M3 LINE L1 5478 5811 -378 2 945 372 103 0 0 chrX 47190715 47190773 -119459523 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 945 531 310 31 26 chrX 47190988 47191180 -119459116 + B3A SINE B2 4 196 -2 2 945 263 323 59 5 chrX 47191193 47191380 -119458916 + L1M4 LINE L1 4597 4793 -1353 2 945 456 240 0 103 chrX 47191598 47191714 -119458582 - B1F SINE Alu -7 110 7 2 945 350 321 0 28 chrX 47191617 47191726 -119458570 - ID_B1 SINE B4 -43 181 76 2 945 340 283 88 33 chrX 47191734 47192096 -119458200 + L1M4 LINE L1 4986 5367 -779 2 945 5258 123 44 11 chrX 47192101 47193534 -119456762 + L1VL2 LINE L1 81 1561 -2054 2 945 291 133 0 0 chrX 47193532 47193577 -119456719 - L1_Mus4 LINE L1 -438 6198 6154 2 945 4477 116 73 4 chrX 47193577 47194536 -119455760 - L1_Mus3 LINE L1 -457 6181 5159 2 945 10043 138 14 14 chrX 47194533 47196949 -119453347 + L1_Mus3 LINE L1 4218 6629 -9 2 945 534 271 81 8 chrX 47197027 47197155 -119453141 + Lx9 LINE L1 7381 7526 -118 2 945 775 214 115 21 chrX 47197155 47197346 -119452950 + B3 SINE B2 4 212 -4 2 945 534 271 81 8 chrX 47197346 47197451 -119452845 + Lx9 LINE L1 7527 7630 -14 2 945 277 313 75 15 chrX 47197827 47197960 -119452336 + L1M5 LINE L1 3965 4105 -2041 2 945 11962 79 39 0 chrX 47197955 47199320 -119450976 + L1Md_F2 LINE L1 3858 5234 -649 2 945 315 0 0 0 chrX 47199320 47199355 -119450941 + (TA)n Simple_repeat Simple_repeat 1 35 0 2 945 11962 79 39 0 chrX 47199355 47199653 -119450643 + L1Md_F2 LINE L1 5235 5585 -298 2 945 7497 71 0 10 chrX 47199654 47200659 -119449637 + L1Md_F2 LINE L1 5588 6582 0 2 945 342 304 9 2 chrX 47200671 47200824 -119449472 + L1M5 LINE L1 4104 4257 -1889 2 945 231 293 111 8 chrX 47201002 47201119 -119449177 + L1VL4 LINE L1 664 792 -5824 2 945 9032 121 1 23 chrX 47201119 47203010 -119447286 + L1VL4 LINE L1 708 2560 -3323 2 945 1735 257 16 7 chrX 47202988 47203411 -119446885 - Lx7 LINE L1 -511 7185 6759 2 945 4071 196 79 33 chrX 47203428 47204375 -119445921 - L1_Mur3 LINE L1 -6460 1252 262 2 945 873 297 150 20 chrX 47204377 47204985 -119445311 - L1MD1 LINE L1 -243 5999 5313 2 945 401 280 0 29 chrX 47205226 47205362 -119444934 - L1MD1 LINE L1 -1144 5002 4871 2 945 373 314 17 28 chrX 47205369 47205565 -119444731 - MTE2a LTR MaLR -61 318 152 2 945 262 242 0 31 chrX 47205622 47205686 -119444610 + B4A SINE B4 162 223 -69 2 945 255 31 0 0 chrX 47205756 47205788 -119444508 + (TAAAAA)n Simple_repeat Simple_repeat 2 33 0 2 945 298 286 51 13 chrX 47205803 47205881 -119444415 + B4A SINE B4 212 292 0 2 945 313 303 144 64 chrX 47206195 47206445 -119443851 + L1MD3 LINE L1 4354 4623 -1523 2 945 234 61 61 0 chrX 47206446 47206495 -119443801 + (TTTTTG)n Simple_repeat Simple_repeat 3 54 0 2 945 1140 68 0 0 chrX 47206497 47206643 -119443653 - B1_Mm SINE Alu -1 146 1 2 945 289 324 72 92 chrX 47206646 47206684 -119443612 + L1MD3 LINE L1 4608 4644 -1502 2 945 193 0 94 0 chrX 47206684 47206716 -119443580 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 945 289 324 72 92 chrX 47206716 47207037 -119443259 + L1MD3 LINE L1 4645 4960 -1186 2 945 260 255 111 77 chrX 47207063 47207416 -119442880 + L1MD3 LINE L1 4934 5298 -848 2 945 29670 58 3 0 chrX 47207502 47211335 -119438961 + L1Md_F3 LINE L1 1744 5586 -297 2 945 7748 40 33 5 chrX 47211335 47212305 -119437991 + L1Md_F3 LINE L1 5587 6583 -1 2 945 1449 295 97 39 chrX 47212305 47213093 -119437203 + L1MD3 LINE L1 5599 6533 -1462 2 945 681 325 67 41 chrX 47213093 47213583 -119436713 - MLT1D LTR MaLR 0 505 3 2 945 699 301 131 37 chrX 47213583 47213793 -119436503 + L1MD3 LINE L1 6534 6754 -1241 2 945 872 216 59 7 chrX 47213801 47214020 -119436276 - ORR1C2 LTR MaLR -10 374 110 2 945 576 0 0 0 chrX 47214042 47214106 -119436190 + (TC)n Simple_repeat Simple_repeat 2 65 0 2 945 395 123 185 0 chrX 47214106 47214187 -119436109 - RLTR21 LTR ERVK -760 812 717 2 945 7510 77 5 6 chrX 47214200 47215313 -119434983 - L1_Mus2 LINE L1 -1 6565 5455 2 945 337 44 0 0 chrX 47215314 47215359 -119434937 - L1_Mus2 LINE L1 -6 6560 6516 2 945 344 224 188 0 chrX 47215359 47215444 -119434852 - ORR1C2 LTR MaLR -273 101 1 2 945 1298 296 131 56 chrX 47215445 47216589 -119433707 + L1MD3 LINE L1 6749 7978 -17 2 945 1583 271 111 12 chrX 47216592 47217411 -119432885 + L1ME2z LINE L1 5320 6219 -225 2 945 1648 327 88 40 chrX 47217466 47218652 -119431644 + Lx8 LINE L1 6135 7377 -96 2 945 1393 171 186 150 chrX 47218734 47219353 -119430943 + L1VL2 LINE L1 67 707 -5628 2 945 19070 134 20 51 chrX 47219328 47221005 -119429291 - L1_Mur2 LINE L1 -353 5524 3841 2 945 2157 45 0 4 chrX 47221005 47221273 -119429023 - L1Md_F2 LINE L1 -1 6581 6315 2 945 19070 134 20 51 chrX 47221273 47222207 -119428089 - L1_Mur2 LINE L1 -2037 3840 3040 2 945 1144 68 7 0 chrX 47222207 47222353 -119427943 - B1_Mus2 SINE Alu 0 147 1 2 945 6517 138 24 19 chrX 47222353 47223481 -119426815 - L1_Mur2 LINE L1 -2839 3038 1906 2 945 367 149 40 13 chrX 47223480 47223555 -119426741 - Lx2B LINE L1 -806 6194 6118 2 945 10164 87 6 1 chrX 47223606 47224859 -119425437 - L1_Mus1 LINE L1 0 6567 5315 2 945 4235 79 3 2 chrX 47224859 47225468 -119424828 - L1_Mus1 LINE L1 0 6567 6000 2 945 10164 120 19 3 chrX 47225468 47226450 -119423846 - L1_Mus1 LINE L1 -569 5314 4311 2 945 1432 195 4 0 chrX 47226553 47226876 -119423420 - L1_Mur2 LINE L1 -3937 1949 1624 2 945 2995 157 34 7 chrX 47226882 47227073 -119423223 + L1_Mur2 LINE L1 4860 5050 -827 2 945 636 74 0 0 chrX 47227073 47227168 -119423128 + (TG)n Simple_repeat Simple_repeat 1 95 0 2 945 2995 157 34 7 chrX 47227168 47227542 -119422754 + L1_Mur2 LINE L1 5051 5439 -438 2 945 2905 205 83 8 chrX 47227541 47228201 -119422095 - L1_Mur2 LINE L1 -5900 1186 477 2 945 293 239 32 11 chrX 47228463 47228556 -119421740 + MER20B DNA MER1_type 680 774 -9 2 945 277 415 27 20 chrX 47228865 47229015 -119421281 + MER20B DNA MER1_type 1 151 -632 2 945 974 232 31 4 chrX 47229222 47229482 -119420814 + MER20B DNA MER1_type 517 783 0 2 945 198 300 107 57 chrX 47229628 47229787 -119420509 - MIRb SINE MIR -29 239 73 2 945 226 162 41 68 chrX 47230130 47230203 -119420093 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 2 945 340 200 29 17 chrX 47230207 47230380 -119419916 + (TG)n Simple_repeat Simple_repeat 2 176 0 2 945 558 43 0 0 chrX 47230390 47230459 -119419837 + (TA)n Simple_repeat Simple_repeat 2 70 0 2 945 24 0 0 0 chrX 47231876 47231900 -119418396 + AT_rich Low_complexity Low_complexity 1 24 0 2 945 516 273 50 25 chrX 47231961 47232136 -119418160 + MIRb SINE MIR 56 240 -28 2 945 330 235 54 76 chrX 47232475 47232567 -119417729 + 5S rRNA rRNA 1 90 -31 2 945 704 318 44 40 chrX 47232922 47233171 -119417125 - MLT1G3 LTR MaLR -2 593 344 2 945 3696 72 2 2 chrX 47233430 47233915 -119416381 - L1_Mus1 LINE L1 0 6567 6083 2 945 250 395 43 48 chrX 47234416 47234665 -119415631 - L2c LINE L2 -254 3172 2911 2 945 416 317 59 8 chrX 47235134 47235301 -119414995 - MIRb SINE MIR 0 262 76 2 945 2594 80 11 16 chrX 47235537 47235917 -119414379 - L1_Mus3 LINE L1 0 6638 6261 2 945 709 55 9 0 chrX 47236039 47236149 -119414147 - L1Md_F2 LINE L1 0 6582 6472 2 945 2567 38 16 0 chrX 47236146 47236466 -119413830 - L1Md_F3 LINE L1 -14 6570 6246 2 945 1713 34 15 0 chrX 47236466 47236671 -119413625 - L1Md_F2 LINE L1 -108 6474 6267 2 945 388 126 161 9 chrX 47236767 47236881 -119413415 - B2_Mm2 SINE B2 -1 194 47 2 945 1118 137 34 0 chrX 47236913 47237088 -119413208 - B2_Mm2 SINE B2 -14 181 1 2 945 539 244 7 43 chrX 47237902 47238043 -119412253 - B1_Mur4 SINE Alu -1 149 14 2 945 486 0 0 0 chrX 47238117 47238171 -119412125 + (TA)n Simple_repeat Simple_repeat 1 54 0 2 945 210 207 0 0 chrX 47239970 47240028 -119410268 + T-rich Low_complexity Low_complexity 1 58 0 2 945 1702 168 10 3 chrX 47240047 47240346 -119409950 - Lx4A LINE L1 -1 7057 6757 2 945 1218 54 0 0 chrX 47240398 47240545 -119409751 + B1_Mus1 SINE Alu 2 148 0 2 945 402 108 0 0 chrX 47240546 47240620 -119409676 + (A)n Simple_repeat Simple_repeat 1 74 0 2 945 186 103 0 0 chrX 47240968 47240997 -119409299 + (GAAAA)n Simple_repeat Simple_repeat 5 33 0 2 945 537 356 114 15 chrX 47241228 47241684 -119408612 - L2 LINE L2 -778 2641 2141 2 945 321 331 79 56 chrX 47241870 47242225 -119408071 - L2 LINE L2 -1641 1778 1416 2 945 199 372 64 27 chrX 47242779 47242930 -119407366 - MIR3 SINE MIR -45 163 8 2 945 591 53 0 0 chrX 47242930 47243005 -119407291 + (TCTA)n Simple_repeat Simple_repeat 3 77 0 2 945 232 292 0 89 chrX 47245710 47245789 -119404507 - B4 SINE B4 -2 290 219 2 945 6259 68 4 0 chrX 47245853 47246656 -119403640 - L1_Mus1 LINE L1 -1 6566 5761 2 945 448 276 15 15 chrX 47247391 47247527 -119402769 - L1M5 LINE L1 -722 5518 5383 2 945 21 36 0 0 chrX 47247946 47247974 -119402322 + AT_rich Low_complexity Low_complexity 1 28 0 2 945 335 313 154 29 chrX 47248159 47248399 -119401897 - L1M5 LINE L1 -1329 4817 4548 2 945 5393 200 76 13 chrX 47248423 47249620 -119400676 - Lx9 LINE L1 0 7644 6373 2 945 327 277 0 43 chrX 47249918 47250035 -119400261 - L1ME1 LINE L1 -214 5965 5854 3 945 8137 48 1 1 chrX 47250069 47251473 -119398823 - L1Md_F2 LINE L1 0 6582 5179 3 945 1139 35 0 0 chrX 47251473 47251615 -119398681 + B1_Mus2 SINE Alu 6 147 0 3 945 207 0 0 0 chrX 47251615 47251638 -119398658 + (A)n Simple_repeat Simple_repeat 1 23 0 3 945 315 261 43 0 chrX 47251880 47251972 -119398324 - L1ME1 LINE L1 -550 5614 5519 3 945 981 153 0 0 chrX 47252224 47252400 -119397896 + GA-rich Low_complexity Low_complexity 3 178 0 3 945 503 339 33 17 chrX 47252796 47253036 -119397260 - RodERV21-int LTR ERV1 -396 4595 4352 3 945 1179 319 57 53 chrX 47253060 47253870 -119396426 - RodERV21-int LTR ERV1 -1420 3571 2759 3 945 423 364 70 31 chrX 47254267 47254494 -119395802 + B4A SINE B4 41 276 -16 3 945 275 220 0 0 chrX 47254674 47254724 -119395572 + B3A SINE B2 75 124 -74 3 945 566 342 0 26 chrX 47254728 47254956 -119395340 + Lx8 LINE L1 7112 7333 -140 3 945 2257 88 6 0 chrX 47255142 47255462 -119394834 - L1_Mus2 LINE L1 -569 5997 5676 3 945 1857 139 0 36 chrX 47255461 47255790 -119394506 - L1_Mus2 LINE L1 -475 5408 5092 3 945 9036 82 25 3 chrX 47255827 47257765 -119392531 - L1Md_F2 LINE L1 -2 6580 4601 3 945 7888 102 29 112 chrX 47257765 47260142 -119390154 - L1Md_F2 LINE L1 0 6582 4458 3 945 1065 98 0 0 chrX 47260142 47260285 -119390011 - B1_Mm SINE Alu 0 147 5 3 945 5717 132 49 190 chrX 47260285 47260390 -119389906 - L1Md_F2 LINE L1 -1426 4457 4353 3 945 3976 90 17 34 chrX 47260390 47260979 -119389317 + L1_Mus2 LINE L1 5988 6566 0 3 945 801 164 0 28 chrX 47261154 47261330 -119388966 + GA-rich Low_complexity Low_complexity 2 172 0 3 945 947 277 17 151 chrX 47261377 47261606 -119388690 + Lx6 LINE L1 7085 7257 -203 3 945 1185 61 0 0 chrX 47261606 47261754 -119388542 - B1_Mus1 SINE Alu 0 148 1 3 945 947 277 17 151 chrX 47261754 47261928 -119388368 + Lx6 LINE L1 7258 7434 -26 3 945 1373 290 21 32 chrX 47262001 47262306 -119387990 - L1M2 LINE L1 -701 5599 5300 3 945 207 125 0 0 chrX 47262306 47262346 -119387950 + (ATTG)n Simple_repeat Simple_repeat 2 41 0 3 945 1373 268 38 45 chrX 47262346 47262819 -119387477 - L1M2 LINE L1 -844 5299 4828 3 945 250 254 0 16 chrX 47263120 47263184 -119387112 - L1M5 LINE L1 -2501 3645 3583 3 945 431 228 0 0 chrX 47263233 47263312 -119386984 - ID4 SINE ID 0 83 5 3 945 225 0 0 0 chrX 47263549 47263574 -119386722 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 3 945 1722 222 56 0 chrX 47263595 47263950 -119386346 + Lx4B LINE L1 6128 6502 -556 3 945 229 204 0 0 chrX 47264210 47264264 -119386032 + T-rich Low_complexity Low_complexity 2 55 0 3 945 546 355 21 14 chrX 47264352 47264632 -119385664 - B4A SINE B4 -6 286 5 3 945 304 281 176 33 chrX 47264840 47265050 -119385246 - L1M5 LINE L1 -3418 2728 2489 3 945 214 411 64 0 chrX 47266277 47266437 -119383859 + MIRb SINE MIR 1 171 -97 3 945 306 0 0 0 chrX 47266521 47266555 -119383741 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 945 489 34 0 0 chrX 47266558 47266617 -119383679 + (TTTC)n Simple_repeat Simple_repeat 3 61 0 3 945 1450 70 0 5 chrX 47267951 47268152 -119382144 + L1Md_F2 LINE L1 6383 6582 0 3 945 328 354 15 23 chrX 47268207 47268415 -119381881 + MIRb SINE MIR 20 234 -34 3 945 917 286 176 4 chrX 47268595 47269156 -119381140 + L1MA6 LINE L1 5642 6299 -1 3 945 555 16 0 0 chrX 47269158 47269222 -119381074 + (TA)n Simple_repeat Simple_repeat 1 64 0 3 945 454 319 72 16 chrX 47269585 47269779 -119380517 + MIRc SINE MIR 32 236 -32 3 945 21772 147 34 27 chrX 47269857 47272076 -119378220 - L1_Mus3 LINE L1 -1 6996 4793 3 945 1025 94 0 0 chrX 47272076 47272214 -119378082 - B1_Mm SINE Alu -9 138 1 3 945 21772 120 17 19 chrX 47272214 47274642 -119375654 - L1_Mus3 LINE L1 -1091 4792 2383 3 945 256 288 186 31 chrX 47274794 47274923 -119375373 - L2a LINE L2 0 3426 3278 3 945 749 216 184 26 chrX 47274935 47275277 -119375019 + Lx9 LINE L1 7248 7643 -1 3 945 32 0 0 0 chrX 47275278 47275310 -119374986 + AT_rich Low_complexity Low_complexity 1 32 0 3 945 7670 55 1 0 chrX 47275431 47276393 -119373903 + L1Md_F2 LINE L1 5620 6582 0 3 945 207 367 0 0 chrX 47277498 47277558 -119372738 - L2a LINE L2 -9 3417 3358 3 945 192 324 113 0 chrX 47279183 47279254 -119371042 + MER5B DNA MER1_type 2 80 -98 3 945 429 20 0 0 chrX 47279401 47279451 -119370845 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 945 744 305 37 43 chrX 47279476 47279959 -119370337 - L1MA6 LINE L1 -182 6118 5639 3 945 414 0 0 0 chrX 47280477 47280523 -119369773 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 945 23 0 0 0 chrX 47280854 47280877 -119369419 + AT_rich Low_complexity Low_complexity 1 23 0 3 945 458 267 140 4 chrX 47281077 47281355 -119368941 + L1MD LINE L1 2651 2966 -3180 3 945 355 312 12 146 chrX 47281476 47281618 -119368678 + L1MA6 LINE L1 5508 5623 -566 3 945 1036 72 0 42 chrX 47281618 47281762 -119368534 + B1_Mus1 SINE Alu 2 139 -9 3 945 355 312 12 146 chrX 47281762 47281874 -119368422 + L1MA6 LINE L1 5624 5706 -483 3 945 3999 83 2 0 chrX 47281874 47282401 -119367895 - L1_Mus2 LINE L1 -2 6564 6037 3 945 496 312 14 139 chrX 47282401 47282646 -119367650 + L1MA6 LINE L1 5707 5938 -362 3 945 856 191 34 6 chrX 47282646 47282825 -119367471 + Lx4B LINE L1 6869 7052 -6 3 945 496 319 33 40 chrX 47282825 47283068 -119367228 + L1MA6 LINE L1 5939 6184 -116 3 945 427 216 0 29 chrX 47283081 47283186 -119367110 - ORR1A2 LTR MaLR -225 102 1 3 945 1651 283 80 2 chrX 47283210 47283759 -119366537 + Lx8 LINE L1 6874 7465 -8 3 945 339 244 562 7 chrX 47283775 47283912 -119366384 + MTE2b LTR MaLR 166 378 -1 3 945 374 300 14 0 chrX 47283943 47284040 -119366256 + PB1D10 SINE Alu 5 107 -10 3 945 348 0 58 0 chrX 47284155 47284207 -119366089 + (CAAAAA)n Simple_repeat Simple_repeat 2 56 0 3 945 836 305 45 33 chrX 47284250 47284677 -119365619 + L1MD LINE L1 5385 5816 -543 3 945 1307 72 0 6 chrX 47284834 47285015 -119365281 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 945 2433 310 62 35 chrX 47285034 47286132 -119364164 - Lx8 LINE L1 -144 7329 6202 3 945 573 301 22 13 chrX 47286152 47286356 -119363940 - RMER1C Other Other -605 737 556 3 945 301 314 64 28 chrX 47286293 47286434 -119363862 + RMER1C Other Other 712 857 -485 3 945 424 229 195 13 chrX 47286411 47286449 -119363847 + RMER1C Other Other 1154 1191 -151 3 945 500 81 0 13 chrX 47286449 47286524 -119363772 + (TTA)n Simple_repeat Simple_repeat 3 76 0 3 945 424 229 195 13 chrX 47286524 47286644 -119363652 + RMER1C Other Other 1192 1340 -2 3 945 189 0 0 0 chrX 47287952 47287973 -119362323 + (TA)n Simple_repeat Simple_repeat 2 22 0 3 945 522 0 0 0 chrX 47288490 47288548 -119361748 + (CCA)n Simple_repeat Simple_repeat 1 58 0 3 945 6106 128 6 0 chrX 47288670 47289673 -119360623 - Lx LINE L1 -7 6647 5666 3 945 423 0 0 0 chrX 47291041 47291088 -119359208 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 945 450 0 0 0 chrX 47291088 47291137 -119359159 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 945 482 336 23 0 chrX 47291153 47291281 -119359015 - RSINE1 SINE B4 -11 154 24 3 945 6144 132 21 13 chrX 47291446 47292789 -119357507 + Lx2 LINE L1 5290 6644 -353 3 945 405 102 0 0 chrX 47292804 47292863 -119357433 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 945 378 0 0 0 chrX 47292920 47292962 -119357334 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 3 945 6317 148 82 17 chrX 47292962 47294079 -119356217 - Lx4A LINE L1 -9 7049 5861 3 945 6428 55 2 8 chrX 47294567 47295416 -119354880 - L1Md_T LINE L1 -13 6569 5726 3 945 2848 32 0 0 chrX 47295411 47295759 -119354537 + L1Md_T LINE L1 5379 5726 -157 3 945 198 289 0 32 chrX 47296907 47297000 -119353296 - MIRc SINE MIR -1 267 178 3 945 187 328 15 15 chrX 47297338 47297403 -119352893 - MIRm SINE MIR -133 143 79 3 945 403 250 129 36 chrX 47297494 47297718 -119352578 - L1M2 LINE L1 -1045 5098 4854 3 945 239 0 32 0 chrX 47298762 47298793 -119351503 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 3 945 575 269 128 16 chrX 47298802 47299051 -119351245 - L1M2 LINE L1 -1296 4847 4571 3 945 4427 61 0 2 chrX 47299085 47299643 -119350653 + L1Md_F2 LINE L1 6013 6569 -13 3 945 499 282 100 71 chrX 47299678 47300017 -119350279 + L1MA6 LINE L1 5288 5636 -676 3 945 495 0 0 0 chrX 47300025 47300080 -119350216 + (TC)n Simple_repeat Simple_repeat 2 56 0 3 945 333 0 0 0 chrX 47300080 47300116 -119350180 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 945 242 145 32 0 chrX 47300149 47300211 -119350085 + (TCTCTG)n Simple_repeat Simple_repeat 6 69 0 3 945 648 292 67 64 chrX 47300218 47300784 -119349512 + L1MA6 LINE L1 5662 6229 -62 3 945 306 338 115 51 chrX 47301802 47302055 -119348241 - L1M5 LINE L1 -488 5636 5368 3 945 619 261 124 5 chrX 47302366 47302559 -119347737 - B3 SINE B2 0 216 1 3 945 2931 205 58 3 chrX 47302814 47303499 -119346797 + Lx9 LINE L1 6813 7535 -109 3 945 36850 6 0 0 chrX 47303557 47309142 -119341154 + L1Md_A LINE L1 1 5586 -297 3 945 9007 4 1 0 chrX 47309142 47310137 -119340159 + L1Md_A LINE L1 5587 6582 0 3 945 214 182 0 22 chrX 47310183 47310228 -119340068 + CT-rich Low_complexity Low_complexity 3 46 0 3 945 357 303 60 6 chrX 47310434 47310600 -119339696 + MER53 DNA hAT 6 180 -13 3 945 24 67 0 0 chrX 47310864 47310909 -119339387 + AT_rich Low_complexity Low_complexity 1 45 0 3 945 255 339 86 37 chrX 47311211 47311398 -119338898 + MIRb SINE MIR 26 221 -47 3 945 2224 208 134 6 chrX 47311520 47312448 -119337848 - L1_Mus4 LINE L1 -2 7471 5990 3 945 1994 111 7 13 chrX 47312449 47312758 -119337538 + L1_Mus3 LINE L1 6327 6633 -5 3 945 33 56 0 0 chrX 47312955 47313009 -119337287 + AT_rich Low_complexity Low_complexity 1 54 0 3 945 198 108 0 139 chrX 47313469 47313512 -119336784 + MIR SINE MIR 114 150 -58 3 945 1091 68 7 0 chrX 47313781 47313958 -119336338 - L1_Mus2 LINE L1 0 6566 6415 3 945 182 139 0 44 chrX 47314007 47314052 -119336244 + CT-rich Low_complexity Low_complexity 3 45 0 3 945 1646 198 21 19 chrX 47314389 47314764 -119335532 - Lx9 LINE L1 -153 7491 7116 3 945 511 299 0 33 chrX 47314829 47314950 -119335346 + RSINE1 SINE B4 6 122 -43 3 945 227 333 94 8 chrX 47315087 47315214 -119335082 - MIRb SINE MIR -21 247 110 3 945 303 290 61 18 chrX 47315226 47315391 -119334905 + L1_Mur3 LINE L1 5184 5355 -525 3 945 697 246 0 0 chrX 47315396 47315522 -119334774 + RSINE1 SINE B4 3 128 -37 3 945 387 0 0 0 chrX 47315539 47315582 -119334714 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 945 609 312 13 61 chrX 47315586 47315979 -119334317 + L1_Rod LINE L1 5332 5705 -142 4 118 2541 291 96 23 chrX 47315986 47317023 -119333273 + Lx8 LINE L1 6211 7323 -150 4 946 378 0 0 0 chrX 47317038 47317080 -119333216 + (CCA)n Simple_repeat Simple_repeat 2 43 0 4 946 267 103 0 0 chrX 47317081 47317120 -119333176 + (CAG)n Simple_repeat Simple_repeat 1 39 0 4 946 188 371 67 11 chrX 47317302 47317392 -119332904 - MIR SINE MIR -161 101 7 3 946 246 260 55 0 chrX 47317542 47317615 -119332681 + L2a LINE L2 3349 3425 -1 4 946 18344 18 0 0 chrX 47318954 47321170 -119329126 + L1Md_T LINE L1 3371 5586 -297 4 946 8025 55 0 0 chrX 47321170 47322166 -119328130 + L1Md_T LINE L1 5587 6582 0 4 946 533 297 184 23 chrX 47324518 47325039 -119325257 - L1MC3 LINE L1 -228 7557 6953 4 946 519 281 92 21 chrX 47325063 47325463 -119324833 + L1MA9 LINE L1 5138 5574 -738 4 946 1695 219 19 54 chrX 47325479 47325943 -119324353 - Lx9 LINE L1 -447 7197 6750 4 946 241 138 16 49 chrX 47325998 47326059 -119324237 + Lx9 LINE L1 7306 7364 -280 4 946 2728 173 25 6 chrX 47326059 47326535 -119323761 + Lx4A LINE L1 6568 7052 -6 4 946 288 154 0 0 chrX 47326535 47326587 -119323709 + (CATA)n Simple_repeat Simple_repeat 3 54 0 4 946 444 242 231 5 chrX 47326671 47326883 -119323413 + Lx9 LINE L1 7385 7644 0 4 946 30 45 0 0 chrX 47326945 47326989 -119323307 + AT_rich Low_complexity Low_complexity 1 44 0 4 946 361 268 63 7 chrX 47327058 47327201 -119323095 + L1MA9 LINE L1 5789 5939 -373 4 946 555 232 169 0 chrX 47327368 47327510 -119322786 - B3 SINE B2 -40 176 11 4 946 1788 241 148 5 chrX 47327511 47328066 -119322230 + Lx7 LINE L1 6145 6778 -918 4 946 287 330 9 0 chrX 47328074 47328186 -119322110 + Lx6 LINE L1 7143 7255 -205 4 946 188 34 0 33 chrX 47328186 47328216 -119322080 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 4 946 938 76 0 8 chrX 47328237 47328370 -119321926 + (GGAA)n Simple_repeat Simple_repeat 1 132 0 4 946 392 125 82 10 chrX 47328530 47328627 -119321669 - L1Md_F2 LINE L1 -1 6581 6478 4 946 1443 271 56 39 chrX 47328794 47329541 -119320755 - L1MB4 LINE L1 -33 6147 5388 4 946 5772 56 6 1 chrX 47329545 47331073 -119319223 + L1Md_A LINE L1 379 1872 -4011 4 946 11559 34 3 1 chrX 47331998 47333436 -119316860 + L1Md_A LINE L1 4148 5586 -297 4 946 8055 46 1 15 chrX 47333436 47334446 -119315850 + L1Md_T LINE L1 5587 6582 0 4 946 11559 34 3 1 chrX 47334446 47334469 -119315827 + L1Md_A LINE L1 5587 5611 -272 4 946 3721 172 33 3 chrX 47334565 47335236 -119315060 + ORR1B2-int LTR MaLR 819 1509 0 4 946 1433 195 33 15 chrX 47335236 47335507 -119314789 + ORR1B2 LTR MaLR 1 276 -91 4 946 573 15 0 0 chrX 47335512 47335578 -119314718 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 946 394 331 126 25 chrX 47335580 47336193 -119314103 - L1MB4 LINE L1 -1056 5090 4416 4 946 38 65 0 21 chrX 47336218 47336282 -119314014 + AT_rich Low_complexity Low_complexity 1 63 0 4 946 3196 116 34 0 chrX 47336282 47336748 -119313548 - Lx3A LINE L1 -10 6971 6490 4 946 38 65 0 21 chrX 47336748 47336778 -119313518 + AT_rich Low_complexity Low_complexity 1 30 0 4 946 2761 70 0 3 chrX 47336800 47337157 -119313139 - L1_Mus2 LINE L1 -10 6556 6201 4 946 1127 193 358 22 chrX 47337352 47337622 -119312674 - ORR1B2 LTR MaLR -6 361 1 4 946 1364 358 46 9 chrX 47337629 47338412 -119311884 - Lx8 LINE L1 -153 7320 6509 4 946 23 54 0 0 chrX 47339044 47339081 -119311215 + AT_rich Low_complexity Low_complexity 1 37 0 4 946 240 305 21 28 chrX 47339513 47339658 -119310638 + L1MC4 LINE L1 6445 6588 -1407 4 946 428 101 0 25 chrX 47339692 47339773 -119310523 + (CAGA)n Simple_repeat Simple_repeat 2 80 0 4 946 295 214 0 33 chrX 47339808 47339900 -119310396 + GA-rich Low_complexity Low_complexity 6 94 0 4 946 293 362 40 0 chrX 47339985 47340134 -119310162 + L1MC4 LINE L1 6795 6949 -1093 4 946 268 308 68 31 chrX 47340192 47340509 -119309787 + L1MC4 LINE L1 7085 7409 -633 4 946 381 309 81 8 chrX 47340673 47340797 -119309499 + RSINE1 SINE B4 4 136 -29 4 946 430 370 52 21 chrX 47340826 47341152 -119309144 + L1MC4 LINE L1 7588 7923 -119 4 946 248 263 13 13 chrX 47341665 47341742 -119308554 - B3A SINE B2 -120 78 2 4 946 21 36 0 0 chrX 47341788 47341816 -119308480 + AT_rich Low_complexity Low_complexity 1 28 0 4 946 3085 120 46 35 chrX 47341946 47342490 -119307806 + Lx2B LINE L1 6102 6651 -349 4 946 278 274 0 6 chrX 47342641 47342821 -119307475 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 946 342 67 0 0 chrX 47342830 47342875 -119307421 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 946 328 262 37 18 chrX 47342986 47343095 -119307201 - PB1D10 SINE Alu -2 115 5 4 946 846 281 81 50 chrX 47343196 47343738 -119306558 - L1MB7 LINE L1 -11 6173 5615 4 946 219 173 0 0 chrX 47343782 47343834 -119306462 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 946 23 0 0 0 chrX 47344009 47344032 -119306264 + AT_rich Low_complexity Low_complexity 1 23 0 4 946 32 43 0 0 chrX 47344224 47344270 -119306026 + AT_rich Low_complexity Low_complexity 1 46 0 4 946 225 241 88 53 chrX 47346776 47346890 -119303406 + L1M5 LINE L1 5783 5900 -224 4 946 681 239 43 9 chrX 47347599 47347831 -119302465 + Lx8 LINE L1 5211 5450 -430 4 946 300 152 45 0 chrX 47347821 47347887 -119302409 + Lx3_Mus LINE L1 6933 7001 -8 4 946 2812 176 50 64 chrX 47347907 47348580 -119301716 + RMER1C Other Other 669 1332 -10 4 946 2732 291 91 29 chrX 47348594 47350045 -119300251 + Lx8 LINE L1 5433 7013 -460 4 946 1919 95 0 0 chrX 47350915 47351179 -119299117 + RLTR10C LTR ERVK 1 264 -172 4 946 33763 36 0 0 chrX 47351180 47356791 -119293505 + L1Md_T LINE L1 1 5589 -297 4 946 9015 6 0 0 chrX 47356791 47357787 -119292509 + L1Md_T LINE L1 5590 6585 0 4 946 406 92 15 44 chrX 47357787 47357855 -119292441 + RMER16 LTR ERVK 385 450 -83 4 946 240 35 0 0 chrX 47357855 47357884 -119292412 + (A)n Simple_repeat Simple_repeat 1 29 0 4 946 448 272 191 0 chrX 47358005 47358141 -119292155 - RSINE1 SINE B4 0 165 4 4 946 261 0 0 0 chrX 47358145 47358174 -119292122 + (TAG)n Simple_repeat Simple_repeat 1 29 0 4 946 198 0 0 0 chrX 47358208 47358230 -119292066 + (A)n Simple_repeat Simple_repeat 1 22 0 4 946 1325 116 0 0 chrX 47358230 47358420 -119291876 + RLTR10C LTR ERVK 247 436 0 4 946 246 365 0 0 chrX 47358850 47358924 -119291372 - ID4_ SINE ID -1 82 9 4 946 286 410 111 20 chrX 47358991 47359235 -119291061 + MER45C DNA Tip100 2 267 -686 4 946 720 338 145 43 chrX 47359476 47359828 -119290468 + MER45C DNA Tip100 565 952 -1 4 946 268 341 11 3 chrX 47360073 47360166 -119290130 + MIRb SINE MIR 1 98 -170 4 946 2481 138 27 25 chrX 47361006 47361452 -119288844 + RLTR11B LTR ERVK 3 449 -4 4 946 181 83 27 27 chrX 47363754 47363791 -119286505 + (CAA)n Simple_repeat Simple_repeat 3 39 0 4 946 209 359 120 0 chrX 47364723 47364865 -119285431 + MIRb SINE MIR 40 198 -70 4 946 390 268 0 89 chrX 47365319 47365487 -119284809 + MIRc SINE MIR 116 268 0 4 946 246 337 63 24 chrX 47366292 47366436 -119283860 - MIR3 SINE MIR -40 168 20 4 946 212 370 30 52 chrX 47366538 47366672 -119283624 + MIR3 SINE MIR 64 194 -14 4 946 3688 111 3 2 chrX 47367037 47367607 -119282689 - L1_Mus2 LINE L1 -357 5526 4956 4 946 4700 110 123 64 chrX 47367609 47368622 -119281674 + L1_Mus2 LINE L1 5502 6566 0 4 946 656 324 2 79 chrX 47368648 47369071 -119281225 + Lx9 LINE L1 6964 7327 -317 4 946 201 178 22 0 chrX 47369134 47369179 -119281117 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 946 407 228 75 7 chrX 47369505 47369651 -119280645 + L1MB7 LINE L1 6021 6176 -8 4 946 426 20 0 0 chrX 47369941 47369992 -119280304 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 946 540 45 0 0 chrX 47370266 47370333 -119279963 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 946 425 189 11 0 chrX 47372947 47373042 -119277254 + (CA)n Simple_repeat Simple_repeat 1 96 0 4 946 387 118 0 0 chrX 47373044 47373120 -119277176 + (GA)n Simple_repeat Simple_repeat 1 76 0 4 946 340 344 85 6 chrX 47373203 47373367 -119276929 + MIRb SINE MIR 17 193 -75 4 946 1552 323 14 7 chrX 47373673 47374256 -119276040 - Lx9 LINE L1 -655 6989 6403 4 946 1502 228 9 22 chrX 47374357 47374676 -119275620 - RMER13A LTR ERVK -22 838 524 4 946 956 183 0 7 chrX 47374675 47374829 -119275467 + RMER13A LTR ERVK 9 161 -699 4 946 1843 81 88 0 chrX 47374839 47375100 -119275196 + MTB LTR MaLR 117 400 0 4 946 3454 181 31 17 chrX 47375100 47375752 -119274544 + RMER13A LTR ERVK 158 818 -42 4 946 1010 228 32 46 chrX 47375797 47376013 -119274283 + 7SK RNA RNA 1 213 -118 4 946 1247 220 3 28 chrX 47376092 47376382 -119273914 - Lx9 LINE L1 -385 7259 6977 4 946 1370 212 64 3 chrX 47376404 47376717 -119273579 + Lx9 LINE L1 6964 7295 -349 4 946 1708 239 182 23 chrX 47376707 47376827 -119273469 - Lx9 LINE L1 -670 6974 6857 4 946 2771 158 79 17 chrX 47376827 47377356 -119272940 - RLTR12A LTR ERVK -4 564 3 4 946 1708 239 182 23 chrX 47377356 47377805 -119272491 - Lx9 LINE L1 -788 6856 6314 4 946 1252 298 41 27 chrX 47378097 47378307 -119271989 - Lx8 LINE L1 -187 7286 7073 4 946 4308 121 85 3 chrX 47378307 47378986 -119271310 - RMER19A LTR ERVK -2 735 1 4 946 1252 298 41 27 chrX 47378986 47379216 -119271080 - Lx8 LINE L1 -401 7072 6840 4 946 590 242 35 20 chrX 47379506 47379704 -119270592 + L1MA4 LINE L1 5730 5930 -370 4 946 768 285 75 5 chrX 47380055 47380467 -119269829 + L1M2 LINE L1 4365 4805 -1338 4 946 635 172 154 15 chrX 47380483 47380684 -119269612 - Lx LINE L1 -9 6645 6417 4 946 7155 130 18 14 chrX 47380655 47382380 -119267916 + L1_Mur2 LINE L1 492 2236 -3641 4 946 1212 48 0 0 chrX 47382380 47382526 -119267770 + B1_Mus2 SINE Alu 2 147 0 4 946 180 0 0 0 chrX 47382526 47382546 -119267750 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 946 7155 121 18 15 chrX 47382546 47382823 -119267473 + L1_Mur2 LINE L1 2237 2507 -3370 4 946 3675 165 42 16 chrX 47382826 47383497 -119266799 + Lx4A LINE L1 6371 7058 0 4 946 5526 113 12 35 chrX 47383872 47383907 -119266389 - Lx LINE L1 0 6654 6629 4 946 540 0 0 0 chrX 47383907 47383967 -119266329 + (TTTTG)n Simple_repeat Simple_repeat 3 62 0 4 946 463 97 473 0 chrX 47383969 47384062 -119266234 - B1_Mur4 SINE Alu -13 137 1 4 946 5526 113 12 35 chrX 47384062 47384885 -119265411 - Lx LINE L1 -26 6628 5813 4 946 3368 227 60 4 chrX 47385016 47385844 -119264452 + Lx9 LINE L1 6428 7302 -342 4 946 950 24 491 0 chrX 47385844 47386015 -119264281 + L1Md_T LINE L1 5332 5586 -297 4 946 7187 56 52 3 chrX 47386015 47386953 -119263343 + L1Md_T LINE L1 5587 6570 -12 4 946 1275 189 82 6 chrX 47386953 47387283 -119263013 + Lx9 LINE L1 7289 7643 -1 4 946 558 243 13 0 chrX 47387280 47387432 -119262864 - Lx8 LINE L1 -616 6857 6704 4 946 3264 60 14 2 chrX 47387449 47387881 -119262415 - L1_Mus2 LINE L1 -2 6564 6128 4 946 1261 295 12 12 chrX 47387883 47388305 -119261991 - Lx8 LINE L1 -756 6717 6296 4 946 22 35 0 0 chrX 47388305 47388334 -119261962 + AT_rich Low_complexity Low_complexity 1 29 0 5 946 863 309 73 7 chrX 47388406 47388814 -119261482 - L1M2 LINE L1 -526 5771 5337 5 946 754 241 9 61 chrX 47388810 47389040 -119261256 - Lx6 LINE L1 -26 7434 7217 5 946 1217 318 7 10 chrX 47389289 47389893 -119260403 - L1M2 LINE L1 -1087 5056 4455 5 946 525 319 48 41 chrX 47390457 47390751 -119259545 - Lx8 LINE L1 -129 7344 7049 5 946 1259 276 69 19 chrX 47390856 47391274 -119259022 + RMER1C Other Other 559 997 -345 5 946 1755 48 9 0 chrX 47391281 47391509 -119258787 - L1_Mus1 LINE L1 0 6567 6338 5 946 1924 109 0 0 chrX 47391544 47391810 -119258486 + L1_Mus1 LINE L1 6289 6554 -13 5 946 270 0 0 0 chrX 47391810 47391840 -119258456 + (TAA)n Simple_repeat Simple_repeat 3 32 0 5 946 937 228 50 0 chrX 47391842 47392083 -119258213 + RMER1C Other Other 1056 1308 -34 5 946 5503 45 0 0 chrX 47392105 47392771 -119257525 + L1Md_T LINE L1 5917 6582 0 5 946 1528 55 0 5 chrX 47392768 47392969 -119257327 + L1Md_F2 LINE L1 6382 6581 -1 5 946 650 47 12 0 chrX 47393065 47393151 -119257145 + (TC)n Simple_repeat Simple_repeat 1 87 0 5 946 10703 242 84 45 chrX 47393556 47397244 -119253052 + L1_Mur3 LINE L1 929 4677 -1203 5 946 5977 183 13 19 chrX 47397244 47398376 -119251920 + Lx2 LINE L1 5860 6984 -13 5 946 10703 238 86 44 chrX 47398376 47399122 -119251174 + L1_Mur3 LINE L1 4678 5538 -342 5 946 564 305 0 0 chrX 47399123 47399300 -119250996 + L1_Mur3 LINE L1 5345 5521 -359 5 946 2810 235 61 7 chrX 47399874 47400580 -119249716 + Lx7 LINE L1 6555 7298 -398 5 946 11756 115 4 5 chrX 47400574 47402470 -119247826 + L1_Mus2 LINE L1 3962 5858 -708 5 946 378 0 0 0 chrX 47402470 47402512 -119247784 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 946 2657 84 5 15 chrX 47402512 47402647 -119247649 + L1_Mus2 LINE L1 5859 5990 -576 5 946 4361 167 30 10 chrX 47402731 47403543 -119246753 + Lx3_Mus LINE L1 6174 7001 -8 5 946 245 84 0 101 chrX 47403620 47403699 -119246597 + (TCTCTG)n Simple_repeat Simple_repeat 2 72 0 5 946 5067 90 20 1 chrX 47403731 47404443 -119245853 - L1_Mus3 LINE L1 -2 6636 5912 5 946 1400 139 100 4 chrX 47404675 47404934 -119245362 - Lx3B LINE L1 -4 6969 6686 5 946 642 91 0 0 chrX 47404946 47405034 -119245262 - Lx3B LINE L1 -397 6576 6489 5 946 18418 96 23 9 chrX 47405038 47407973 -119242323 - L1_Mur1 LINE L1 -834 5052 2076 5 946 225 83 0 0 chrX 47407975 47408011 -119242285 + (T)n Simple_repeat Simple_repeat 1 36 0 5 946 37328 36 1 6 chrX 47408036 47414401 -119235895 - L1Md_T LINE L1 0 6582 254 5 946 3868 121 14 0 chrX 47414404 47415050 -119235246 - L1_Mur1 LINE L1 -3800 2086 1432 5 946 180 0 0 0 chrX 47415050 47415070 -119235226 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 5 946 837 34 0 33 chrX 47415090 47415211 -119235085 - L1Md_T LINE L1 -2 6580 6464 5 946 353 309 67 0 chrX 47415382 47415560 -119234736 - L1M3 LINE L1 -1071 5069 4880 5 946 7181 71 7 3 chrX 47415766 47417264 -119233032 - L1Md_F2 LINE L1 -13 6569 5066 5 946 7293 62 7 1 chrX 47417257 47418307 -119231989 - L1Md_F2 LINE L1 0 6582 5525 5 946 374 113 0 31 chrX 47418302 47418366 -119231930 + L1_Mur1 LINE L1 2293 2354 -3532 5 946 9566 82 16 22 chrX 47418365 47419865 -119230431 + Lx3_Mus LINE L1 5078 6587 -422 5 946 1128 75 7 0 chrX 47419865 47420011 -119230285 + B1_Mm SINE Alu 1 147 0 5 946 9566 83 5 41 chrX 47420011 47420482 -119229814 + Lx3_Mus LINE L1 6588 7009 0 5 946 1980 165 27 0 chrX 47420480 47420886 -119229410 + MusHAL1 LINE L1 1114 1530 -1182 5 946 517 133 0 12 chrX 47420887 47420971 -119229325 - Lx2 LINE L1 -680 6317 6235 5 946 1289 44 0 6 chrX 47420972 47421133 -119229163 + B2_Mm2 SINE B2 14 173 -22 5 946 905 189 0 0 chrX 47421146 47421294 -119229002 + B1_Mur2 SINE Alu 1 148 -1 5 946 5200 218 44 6 chrX 47421345 47422597 -119227699 + Lx9 LINE L1 6344 7643 -1 5 946 660 271 59 7 chrX 47423595 47423881 -119226415 - Lx9 LINE L1 -16 7628 7328 5 946 248 237 118 0 chrX 47423881 47423957 -119226339 + Lx9 LINE L1 7108 7192 -452 5 946 522 0 0 0 chrX 47424948 47425006 -119225290 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 946 356 59 20 0 chrX 47425006 47425056 -119225240 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 946 21 0 0 0 chrX 47425118 47425139 -119225157 + AT_rich Low_complexity Low_complexity 1 21 0 5 946 518 311 0 0 chrX 47425245 47425377 -119224919 - B1_Mur2 SINE Alu -17 132 1 5 946 407 325 83 34 chrX 47426296 47426500 -119223796 - MLT1I LTR MaLR -49 362 149 5 946 243 243 38 75 chrX 47426807 47426887 -119223409 - PB1D10 SINE Alu 0 117 41 5 946 5189 89 4 1 chrX 47426931 47427638 -119222658 - L1_Mus3 LINE L1 -10 6628 5920 5 946 7677 44 3 1 chrX 47427639 47428712 -119221584 - L1Md_F2 LINE L1 -1 6581 5507 5 946 1870 85 0 4 chrX 47428711 47428971 -119221325 + L1Md_F2 LINE L1 5328 5586 -297 5 946 7722 69 0 4 chrX 47428972 47429968 -119220328 + L1Md_F2 LINE L1 5588 6579 -3 5 946 2913 146 30 0 chrX 47429972 47430473 -119219823 + L1_Mm LINE L1 5368 5883 0 5 946 259 264 19 0 chrX 47430495 47430548 -119219748 - B1F SINE Alu -95 54 1 5 946 326 239 29 7 chrX 47430724 47430815 -119219481 + B3 SINE B2 1 97 -98 5 946 357 117 0 0 chrX 47430877 47430937 -119219359 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 946 341 304 79 61 chrX 47430985 47431262 -119219034 - L1MA4 LINE L1 -1736 5960 5679 5 946 604 97 121 26 chrX 47432039 47432155 -119218141 - L1Md_F2 LINE L1 -5 6577 6451 5 946 306 333 145 6 chrX 47432376 47432548 -119217748 + MIRb SINE MIR 52 247 -21 5 946 306 0 0 0 chrX 47433990 47434024 -119216272 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 946 418 135 0 35 chrX 47434024 47434139 -119216157 + (CAGAGA)n Simple_repeat Simple_repeat 2 112 0 5 946 3491 73 23 2 chrX 47434657 47435136 -119215160 + L1_Mus3 LINE L1 6146 6634 -4 5 946 335 345 113 13 chrX 47435265 47435494 -119214802 - L1ME2 LINE L1 -7 6157 5906 5 946 6072 124 5 9 chrX 47435508 47436559 -119213737 + MusHAL1 LINE L1 567 1613 -1099 5 946 34766 66 1 25 chrX 47436550 47442640 -119207656 + L1Md_T LINE L1 99 5586 -297 5 946 8007 58 0 0 chrX 47442640 47443667 -119206629 + L1Md_T LINE L1 5587 6582 0 5 946 14504 165 18 51 chrX 47443668 47444274 -119206022 + L1_Mus4 LINE L1 2798 3267 -2616 5 946 513 0 0 0 chrX 47444274 47444331 -119205965 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 5 946 14504 150 25 37 chrX 47444331 47447669 -119202627 + L1_Mus4 LINE L1 3268 6634 -2 5 946 31 44 0 0 chrX 47447669 47447714 -119202582 + AT_rich Low_complexity Low_complexity 1 45 0 5 118 2027 196 45 20 chrX 47447910 47448447 -119201849 + L1_Rod LINE L1 4706 5255 -592 5 947 396 0 0 0 chrX 47448452 47448496 -119201800 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 947 496 301 58 84 chrX 47448612 47448837 -119201459 + ID_B1 SINE B4 1 219 -5 5 947 504 309 0 4 chrX 47448896 47449182 -119201114 + (CCA)n Simple_repeat Simple_repeat 1 284 0 5 947 510 17 0 0 chrX 47449322 47449381 -119200915 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 947 326 352 65 25 chrX 47449463 47449664 -119200632 - L1MEg LINE L1 -4532 1552 1344 5 947 195 69 0 0 chrX 47449669 47449698 -119200598 + (T)n Simple_repeat Simple_repeat 1 29 0 5 947 362 192 30 23 chrX 47449758 47449891 -119200405 - Lx9 LINE L1 -2 7642 7509 5 947 1287 266 23 6 chrX 47449891 47450243 -119200053 + Lx9 LINE L1 6628 6985 -659 5 947 4090 187 5 4 chrX 47450290 47451054 -119199242 + L1VL4 LINE L1 1 765 -5537 5 947 622 149 16 8 chrX 47451050 47451172 -119199124 - L1_Mm LINE L1 -473 5410 5288 5 947 781 186 12 31 chrX 47451178 47451339 -119198957 - RLTR11A LTR ERVK -1 527 370 5 947 31170 80 14 15 chrX 47451372 47457778 -119192518 - L1Md_F2 LINE L1 -4 6578 184 5 947 1131 91 0 6 chrX 47457790 47457956 -119192340 - L1Md_F2 LINE L1 -15 6567 6403 5 947 1711 110 7 0 chrX 47457956 47458228 -119192068 - L1_Mm LINE L1 -620 5263 4990 5 947 6740 84 14 2 chrX 47458223 47459320 -119190976 + L1_Mus2 LINE L1 5454 6563 -3 5 947 7267 102 18 1 chrX 47459337 47460649 -119189647 + L1VL4 LINE L1 754 2090 -1469 5 947 3088 152 12 18 chrX 47460648 47460700 -119189596 + Lx LINE L1 5314 5365 -518 5 947 6979 63 15 8 chrX 47460700 47461614 -119188682 + L1Md_F2 LINE L1 5650 6570 -12 5 947 3088 157 139 16 chrX 47461614 47462742 -119187554 + Lx LINE L1 5366 6630 -24 5 947 1015 8 0 0 chrX 47462736 47462856 -119187440 - L1Md_T LINE L1 -249 6333 6214 5 947 2253 0 0 8 chrX 47462857 47463112 -119187184 + L1Md_T LINE L1 6329 6581 -1 5 947 21 0 0 0 chrX 47463146 47463167 -119187129 + AT_rich Low_complexity Low_complexity 1 21 0 5 947 6613 84 29 11 chrX 47463178 47463394 -119186902 - L1_Mus2 LINE L1 -2 6636 6374 5 947 207 0 0 0 chrX 47463394 47463417 -119186879 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 947 6613 78 19 4 chrX 47463417 47464404 -119185892 - L1_Mus2 LINE L1 -193 6373 5369 5 947 748 340 90 21 chrX 47464934 47465457 -119184839 - L1M5 LINE L1 -2852 3294 2736 5 947 7551 150 20 10 chrX 47465893 47467248 -119183048 + Lx2 LINE L1 5628 6996 -1 5 947 257 120 0 39 chrX 47467550 47467602 -119182694 + CT-rich Low_complexity Low_complexity 3 52 0 5 947 207 366 105 8 chrX 47467624 47467748 -119182548 + L2 LINE L2 2870 3005 -414 5 947 361 279 119 35 chrX 47468497 47468783 -119181513 - Lx9 LINE L1 -41 7603 7294 5 947 2238 93 24 12 chrX 47468795 47469133 -119181163 + L1_Mus3 LINE L1 6297 6638 0 5 947 234 297 8 8 chrX 47469466 47469585 -119180711 + (TA)n Simple_repeat Simple_repeat 2 120 0 5 947 843 220 11 0 chrX 47469988 47470170 -119180126 + L1_Rod LINE L1 5594 5777 -70 5 947 2542 231 56 52 chrX 47470169 47471011 -119179285 + Lx9 LINE L1 6793 7637 -7 5 947 697 316 166 29 chrX 47472365 47472942 -119177354 + Lx8 LINE L1 6815 7471 -2 5 947 248 280 96 11 chrX 47473344 47473438 -119176858 - MIRc SINE MIR -51 217 116 5 947 509 321 22 30 chrX 47473736 47473871 -119176425 + RSINE1 SINE B4 1 134 -31 5 947 1323 285 26 160 chrX 47474176 47474953 -119175343 - RMER1B Other Other -327 739 67 5 947 1633 178 71 23 chrX 47474935 47475286 -119175010 + RMER1A Other Other 657 1024 -6 5 947 560 53 13 0 chrX 47476839 47476915 -119173381 + (TAGA)n Simple_repeat Simple_repeat 4 80 0 5 947 417 253 53 7 chrX 47476938 47477089 -119173207 + Lx6 LINE L1 673 830 -6898 6 947 830 205 30 127 chrX 47477640 47477970 -119172326 + Lx6 LINE L1 2743 3040 -2840 6 947 3991 94 73 2 chrX 47477970 47478600 -119171696 + L1_Mus3 LINE L1 5916 6590 -48 6 947 2918 127 0 4 chrX 47478592 47479075 -119171221 - MusHAL1 LINE L1 -1230 2329 1849 6 947 2885 58 5 0 chrX 47479071 47479447 -119170849 - L1_Mus1 LINE L1 -92 6475 6098 6 947 1682 248 45 22 chrX 47479448 47480054 -119170242 - MusHAL1 LINE L1 -2800 760 148 6 947 522 197 45 15 chrX 47480057 47480191 -119170105 + Lx6 LINE L1 4582 4719 -1161 6 947 2649 83 29 8 chrX 47480198 47480574 -119169722 + Lx3_Mus LINE L1 6618 7001 -8 6 947 528 16 0 0 chrX 47480595 47480656 -119169640 + (GA)n Simple_repeat Simple_repeat 2 62 0 6 947 2915 230 89 48 chrX 47480679 47482535 -119167761 + Lx6 LINE L1 5128 7067 -393 6 947 491 260 82 39 chrX 47482550 47482782 -119167514 + Lx7 LINE L1 7455 7696 0 6 947 446 181 193 48 chrX 47483217 47483362 -119166934 - ORR1D2 LTR MaLR 0 370 205 6 947 1906 196 12 104 chrX 47483633 47483704 -119166592 - ORR1B1 LTR MaLR -2 392 339 6 947 2240 99 53 22 chrX 47483704 47484064 -119166232 - Lx LINE L1 0 6654 6284 6 947 1906 192 63 90 chrX 47484064 47484468 -119165828 - ORR1B1 LTR MaLR -56 338 1 6 947 1316 205 127 27 chrX 47484596 47484616 -119165680 - RMER17C LTR ERVK 0 410 392 6 947 459 0 0 0 chrX 47484616 47484667 -119165629 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 947 1316 205 127 27 chrX 47484667 47484828 -119165468 - RMER17C LTR ERVK -19 391 186 6 947 573 64 0 0 chrX 47484828 47484906 -119165390 + (GA)n Simple_repeat Simple_repeat 1 78 0 6 947 1316 205 127 27 chrX 47484906 47485094 -119165202 - RMER17C LTR ERVK -225 185 3 6 947 705 293 45 0 chrX 47487249 47487447 -119162849 - B3 SINE B2 -3 213 7 6 947 5265 160 33 12 chrX 47487970 47489456 -119160840 - Lx LINE L1 -371 6283 4748 6 947 287 177 16 0 chrX 47489582 47489644 -119160652 + CT-rich Low_complexity Low_complexity 2 64 0 6 947 181 300 0 0 chrX 47490723 47490763 -119159533 - L2c LINE L2 -68 3319 3280 6 947 232 359 19 0 chrX 47490907 47491013 -119159283 - L2c LINE L2 -231 3156 3049 6 947 436 283 137 30 chrX 47491454 47491687 -119158609 - MIRc SINE MIR 0 268 11 6 947 1419 220 35 29 chrX 47491949 47492330 -119157966 + ORR1D1 LTR MaLR 1 378 -6 6 947 2473 114 3 0 chrX 47493022 47493409 -119156887 - Lx4A LINE L1 -750 5127 4740 6 947 8030 151 42 6 chrX 47493409 47495213 -119155083 + Lx4A LINE L1 5121 7057 -1 6 947 192 403 0 0 chrX 47495405 47495467 -119154829 + L2b LINE L2 3296 3357 -18 6 947 189 273 0 35 chrX 47495595 47495652 -119154644 - MIR SINE MIR -6 256 202 6 947 401 311 65 26 chrX 47495893 47496048 -119154248 + LTR33B LTR ERVL 338 498 -5 6 947 261 0 0 0 chrX 47496225 47496254 -119154042 + (T)n Simple_repeat Simple_repeat 1 29 0 6 947 326 262 53 69 chrX 47496660 47496791 -119153505 + L1MC4a LINE L1 5822 5950 -1932 6 947 240 294 155 10 chrX 47496800 47496903 -119153393 - MIR3 SINE MIR -12 196 79 6 947 322 368 25 32 chrX 47497435 47497592 -119152704 - RSINE1 SINE B4 -9 156 1 6 947 229 231 64 55 chrX 47497734 47497844 -119152452 + L1MA5 LINE L1 6001 6111 -189 6 947 231 231 99 0 chrX 47497859 47497950 -119152346 + L1MA5 LINE L1 6155 6254 -46 6 947 291 114 0 0 chrX 47497953 47497997 -119152299 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 947 243 0 0 0 chrX 47498567 47498594 -119151702 + (T)n Simple_repeat Simple_repeat 1 27 0 6 947 242 279 62 52 chrX 47498714 47498972 -119151324 + Lx LINE L1 5713 6003 -176 6 947 2630 132 256 4 chrX 47499007 47499539 -119150757 - Lx2 LINE L1 0 6997 6332 6 947 1264 217 91 32 chrX 47499540 47499982 -119150314 + L1Md_F LINE L1 109 576 -5943 6 947 28187 117 8 1 chrX 47500000 47505776 -119144520 + L1_Mus1 LINE L1 746 6563 -4 1 947 15294 110 2 2 chrX 47505812 47509057 -119141239 + L1_Mus1 LINE L1 3328 6651 -3 2 947 487 163 40 20 chrX 47509063 47509163 -119141133 - Lx2 LINE L1 -648 6349 6248 3 947 467 311 55 51 chrX 47509313 47509530 -119140766 + MIRb SINE MIR 43 260 -8 4 947 251 346 92 63 chrX 47509555 47509697 -119140599 + MIR3 SINE MIR 5 150 -58 5 947 3556 57 2 0 chrX 47510094 47510565 -119139731 - L1Md_F2 LINE L1 -212 5671 5200 6 947 7649 45 2 3 chrX 47510565 47511503 -119138793 + L1Md_F2 LINE L1 5642 6578 -4 6 947 39527 5 0 1 chrX 47511653 47518130 -119132166 - L1Md_A LINE L1 -293 6289 1 7 947 6801 29 5 1 chrX 47518465 47519328 -119130968 + L1Md_F3 LINE L1 5768 6584 0 8 947 219 114 0 0 chrX 47519949 47519984 -119130312 + (A)n Simple_repeat Simple_repeat 1 35 0 9 947 246 295 0 11 chrX 47520619 47520708 -119129588 + Lx5 LINE L1 919 1006 -6722 1 947 8187 183 42 98 chrX 47520707 47521591 -119128705 + Lx5 LINE L1 3756 4668 -2382 1 947 1046 224 108 45 chrX 47521591 47521877 -119128419 + MTD LTR MaLR 63 366 -53 1 947 8187 183 42 98 chrX 47521877 47524169 -119126127 + Lx5 LINE L1 4669 7039 -11 1 947 10953 13 0 0 chrX 47524176 47526203 -119124093 - L1Md_T LINE L1 0 6582 4555 1 947 38 0 0 0 chrX 47526204 47526242 -119124054 + AT_rich Low_complexity Low_complexity 1 38 0 1 947 2145 178 95 9 chrX 47527260 47527724 -119122572 + RLTR11A2 LTR ERVK 1 504 -23 1 947 6411 65 11 1 chrX 47527738 47528567 -119121729 + L1_Mus3 LINE L1 5795 6631 -7 1 947 225 24 47 23 chrX 47528946 47528989 -119121307 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1 947 366 341 28 42 chrX 47529060 47529274 -119121022 + L2a LINE L2 3213 3423 -3 1 947 3569 164 62 24 chrX 47529301 47529968 -119120328 + RLTR17 LTR ERVK 1 692 0 1 947 203 174 0 61 chrX 47530073 47530122 -119120174 + CT-rich Low_complexity Low_complexity 3 48 0 1 947 274 295 105 0 chrX 47530125 47530230 -119120066 - B1F SINE Alu -27 122 7 2 947 1523 33 94 9 chrX 47530948 47531160 -119119136 - L1Md_F3 LINE L1 -1 6583 6354 2 947 224 286 18 18 chrX 47531560 47531617 -119118679 - MamSINE1 SINE tRNA -221 69 13 2 947 315 0 0 0 chrX 47532373 47532408 -119117888 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 947 25 0 0 0 chrX 47532432 47532457 -119117839 + AT_rich Low_complexity Low_complexity 1 25 0 2 947 3068 174 42 16 chrX 47532496 47533240 -119117056 + Lx6 LINE L1 2946 3708 -2172 2 947 571 183 14 0 chrX 47533284 47533426 -119116870 + Lx6 LINE L1 5223 5366 -514 2 947 36789 4 0 1 chrX 47533413 47537793 -119112503 + L1Md_A LINE L1 1210 5586 -297 2 947 9032 5 0 0 chrX 47537793 47538789 -119111507 + L1Md_A LINE L1 5587 6582 0 2 947 2021 214 5 0 chrX 47538797 47539218 -119111078 + Lx6 LINE L1 5351 5773 -107 2 947 3657 125 45 23 chrX 47539224 47539831 -119110465 - Lx2 LINE L1 0 6997 6378 2 947 4473 169 26 26 chrX 47539877 47540263 -119110033 + L1_Mur2 LINE L1 1675 2057 -3820 2 947 321 89 0 0 chrX 47540263 47540308 -119109988 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 947 4473 169 26 26 chrX 47540308 47540914 -119109382 + L1_Mur2 LINE L1 2058 2667 -3210 2 947 8501 146 10 101 chrX 47540917 47541636 -119108660 + L1Md_F2 LINE L1 3805 4520 -1363 3 947 4057 220 25 0 chrX 47541636 47542485 -119107811 + Lx5 LINE L1 6172 7041 -9 3 947 1758 49 0 18 chrX 47542485 47542714 -119107582 - L1Md_F3 LINE L1 -16 6568 6344 3 947 8501 146 10 101 chrX 47542714 47543953 -119106343 + L1Md_F2 LINE L1 4521 5585 -298 3 947 7925 49 3 4 chrX 47543953 47544950 -119105346 + L1Md_F2 LINE L1 5587 6582 0 3 947 2923 264 52 18 chrX 47545031 47545966 -119104330 + Lx6 LINE L1 5778 6744 -716 2 947 380 206 0 0 chrX 47545965 47546033 -119104263 + Lx5 LINE L1 6229 6296 -754 3 947 327 277 32 11 chrX 47547685 47547780 -119102516 - MIR3 SINE MIR -38 170 74 3 947 183 114 0 0 chrX 47548327 47548362 -119101934 + (T)n Simple_repeat Simple_repeat 1 35 0 3 947 224 351 129 22 chrX 47549311 47549489 -119100807 + MIRc SINE MIR 22 218 -50 3 947 23 54 0 0 chrX 47549655 47549692 -119100604 + AT_rich Low_complexity Low_complexity 1 37 0 3 947 3182 250 86 26 chrX 47549755 47550912 -119099384 - Lx9 LINE L1 -1685 5959 4709 3 947 222 37 0 0 chrX 47550912 47550939 -119099357 + (TTG)n Simple_repeat Simple_repeat 1 27 0 3 947 3182 247 87 26 chrX 47550939 47551113 -119099183 - Lx9 LINE L1 -1139 4708 4520 3 947 597 28 0 0 chrX 47551134 47551205 -119099091 + (TC)n Simple_repeat Simple_repeat 1 71 0 4 947 1027 235 114 22 chrX 47551242 47551691 -119098605 - Lx9 LINE L1 -2811 3036 2547 3 947 5701 109 35 17 chrX 47551704 47553270 -119097026 + L1Md_F2 LINE L1 380 1975 -3908 4 947 4521 72 7 0 chrX 47553270 47553857 -119096439 + L1Md_F2 LINE L1 5992 6582 0 4 947 5701 92 3 12 chrX 47553857 47553997 -119096299 + L1Md_F2 LINE L1 1976 2115 -3768 4 947 9877 80 5 1 chrX 47553997 47555417 -119094879 + L1Md_F2 LINE L1 4161 5586 -297 4 947 7622 75 0 7 chrX 47555417 47556420 -119093876 + L1Md_F2 LINE L1 5587 6582 0 4 947 620 273 20 65 chrX 47556422 47556716 -119093580 - Lx9 LINE L1 -3294 2553 2273 3 947 5370 60 0 0 chrX 47556740 47557409 -119092887 - L1Md_F2 LINE L1 -12 6570 5902 4 947 532 261 51 0 chrX 47557433 47557609 -119092687 - Lx9 LINE L1 -3559 2288 2104 3 947 365 123 15 0 chrX 47557617 47557682 -119092614 + (TTTC)n Simple_repeat Simple_repeat 2 67 0 4 947 3303 272 26 29 chrX 47558044 47559095 -119091201 + Lx9 LINE L1 6419 7466 -178 4 947 423 0 0 0 chrX 47559117 47559164 -119091132 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 947 206 178 0 22 chrX 47560043 47560089 -119090207 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 4 947 610 258 0 0 chrX 47561175 47561295 -119089001 + B1_Mur1 SINE Alu 3 122 -27 4 947 242 120 60 0 chrX 47561295 47561345 -119088951 + A-rich Low_complexity Low_complexity 2 54 0 4 947 446 360 22 0 chrX 47561439 47561575 -119088721 - RSINE1 SINE B4 -19 146 8 5 947 269 283 31 44 chrX 47562108 47562267 -119088029 + L1M7 LINE L1 1393 1549 -4669 5 947 338 352 21 63 chrX 47562387 47562578 -119087718 - MLT1D LTR MaLR -322 183 1 5 947 513 104 0 0 chrX 47562901 47562978 -119087318 + (TA)n Simple_repeat Simple_repeat 1 77 0 5 947 610 252 77 32 chrX 47562981 47563292 -119087004 - L1MA6 LINE L1 -82 6218 5894 5 947 409 309 6 17 chrX 47563305 47563486 -119086810 - L1MB8 LINE L1 -5 6173 5995 5 947 2517 45 0 6 chrX 47563533 47563848 -119086448 - L1Md_F2 LINE L1 -17 6565 6253 5 947 1074 101 0 7 chrX 47564134 47564283 -119086013 + B1_Mus1 SINE Alu 1 148 0 5 947 1045 43 7 0 chrX 47564401 47564542 -119085754 - L1Md_F2 LINE L1 0 6582 6441 5 947 266 252 105 61 chrX 47564697 47564811 -119085485 - MLT1J1 LTR MaLR -305 139 21 5 947 36826 6 0 0 chrX 47564859 47570350 -119079946 + L1Md_A LINE L1 95 5586 -297 6 947 9065 3 0 0 chrX 47570350 47571346 -119078950 + L1Md_A LINE L1 5587 6582 0 6 947 2254 79 135 11 chrX 47571513 47571860 -119078436 - RLTR10 LTR ERVK 0 390 1 6 947 487 330 85 12 chrX 47572350 47572610 -119077686 - MLT1A0 LTR MaLR -19 355 58 6 947 304 316 222 10 chrX 47572627 47572825 -119077471 + L1MEc LINE L1 408 647 -5753 6 947 654 308 3 18 chrX 47572825 47573144 -119077152 + L1M3 LINE L1 3792 4104 -1779 6 947 996 294 133 16 chrX 47573139 47573581 -119076715 - Lx8 LINE L1 -3 7470 6977 6 947 304 296 54 17 chrX 47573602 47573897 -119076399 + L1M3 LINE L1 4090 4423 -1717 6 947 14045 165 65 5 chrX 47573906 47575287 -119075009 + L1_Mur2 LINE L1 502 2060 -3817 6 947 486 33 0 0 chrX 47575287 47575347 -119074949 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 947 14045 140 66 5 chrX 47575347 47575826 -119074470 + L1_Mur2 LINE L1 2061 2555 -3322 6 947 2989 46 0 3 chrX 47575826 47576198 -119074098 + L1Md_F2 LINE L1 6212 6582 0 6 947 14045 140 66 5 chrX 47576198 47576229 -119074067 + L1_Mur2 LINE L1 2556 2581 -3296 6 947 4365 108 48 1 chrX 47576229 47576891 -119073405 + L1_Mus3 LINE L1 5943 6635 -3 6 947 14045 140 66 5 chrX 47576891 47578440 -119071856 + L1_Mur2 LINE L1 2582 4159 -1718 6 118 8086 95 66 2 chrX 47578441 47579707 -119070589 - L1_Mus2 LINE L1 -337 5546 4200 7 948 5010 92 6 0 chrX 47579723 47580443 -119069853 + L1_Mus2 LINE L1 5587 6310 -256 7 948 4271 87 17 5 chrX 47580444 47581042 -119069254 + L1_Mus2 LINE L1 5961 6565 -1 7 948 5426 177 26 19 chrX 47581090 47581328 -119068968 + L1_Mur2 LINE L1 4147 4384 -1493 6 948 3607 10 0 0 chrX 47581328 47581724 -119068572 - MTA_Mm LTR MaLR 0 396 1 7 948 9632 17 0 0 chrX 47581724 47582822 -119067474 - MTA_Mm-int LTR MaLR 0 1098 1 7 948 3607 10 0 0 chrX 47582822 47583218 -119067078 - MTA_Mm LTR MaLR 0 396 1 7 948 5426 177 26 19 chrX 47583218 47584178 -119066118 + L1_Mur2 LINE L1 4385 5353 -524 6 948 4063 155 11 266 chrX 47584174 47585271 -119065025 + Lx3B LINE L1 4607 5308 -578 7 948 375 121 0 0 chrX 47585271 47585329 -119064967 + (TGAA)n Simple_repeat Simple_repeat 3 60 0 7 948 4063 145 11 101 chrX 47585329 47586197 -119064099 + Lx3B LINE L1 5309 6133 -840 7 948 2711 171 67 22 chrX 47586208 47586790 -119063506 + Lx3B LINE L1 6446 7053 -5 7 948 263 289 201 19 chrX 47586810 47587078 -119063218 + L1M2 LINE L1 4417 4733 -1410 7 948 210 339 0 16 chrX 47587096 47587159 -119063137 + ID4 SINE ID 22 83 0 7 948 726 282 116 11 chrX 47587464 47587803 -119062493 - MTD LTR MaLR -14 405 1 7 948 6554 107 8 4 chrX 47587873 47589001 -119061295 - L1Md_F2 LINE L1 -3 6579 5447 7 948 7618 63 1 2 chrX 47588996 47590420 -119059876 - L1Md_F3 LINE L1 -1 6583 5162 7 948 7659 50 1 1 chrX 47590439 47591489 -119058807 - L1Md_F3 LINE L1 -12 6572 5523 8 948 12868 60 7 1 chrX 47591486 47593843 -119056453 + L1Md_F3 LINE L1 4062 6433 -151 8 948 3871 103 2 15 chrX 47593841 47594580 -119055716 - L1Md_F LINE L1 -4235 1648 898 8 948 2786 35 17 14 chrX 47594580 47594925 -119055371 + ORR1A0 LTR MaLR 1 346 0 8 948 3871 129 77 9 chrX 47594925 47595283 -119055013 - L1Md_F LINE L1 -5719 897 512 8 948 220 356 51 17 chrX 47596045 47596162 -119054134 + MER5A DNA MER1_type 68 188 -1 8 948 4847 77 0 3 chrX 47596231 47596873 -119053423 + L1Md_F2 LINE L1 5940 6579 -3 8 948 270 0 0 0 chrX 47597175 47597205 -119053091 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 948 450 152 94 1 chrX 47598423 47598533 -119051763 + Lx2B LINE L1 5570 5693 -1307 8 948 228 399 23 11 chrX 47598521 47598782 -119051514 - Lx7 LINE L1 -600 7096 6833 8 948 1436 214 55 84 chrX 47598786 47599226 -119051070 + RMER1C Other Other 914 1340 -2 8 948 1043 341 56 10 chrX 47599227 47599713 -119050583 - Lx8 LINE L1 -691 6782 6275 9 948 211 28 0 53 chrX 47599716 47599754 -119050542 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 9 948 2084 213 62 12 chrX 47600356 47600868 -119049428 - Lx7 LINE L1 -391 7305 6768 9 948 30815 79 4 19 chrX 47600872 47606062 -119044234 + L1Md_F2 LINE L1 478 5586 -297 9 948 8089 45 1 6 chrX 47606063 47607062 -119043234 + L1Md_F2 LINE L1 5588 6581 -1 9 948 4447 226 61 13 chrX 47607062 47609046 -119041250 - Lx7 LINE L1 -917 6779 4698 9 948 5727 182 42 36 chrX 47609032 47609688 -119040608 - Lx7 LINE L1 -1846 4034 3367 9 948 3118 64 0 0 chrX 47609688 47610079 -119040217 + L1_Mus1 LINE L1 6177 6567 0 9 948 5727 182 42 36 chrX 47610079 47610537 -119039759 - Lx7 LINE L1 -2514 3366 2928 9 948 1186 62 0 0 chrX 47610537 47610682 -119039614 + B1_Mm SINE Alu 2 146 -1 9 948 5727 182 42 36 chrX 47610682 47611027 -119039269 - Lx7 LINE L1 -2953 2927 2565 9 948 5602 105 75 2 chrX 47611024 47612030 -119038266 + Lx3_Mus LINE L1 5439 6511 -498 9 948 3205 105 129 8 chrX 47612034 47612570 -119037726 - L1_Mur1 LINE L1 -5654 1328 728 9 948 848 175 0 103 chrX 47612569 47612662 -119037634 - Lx7 LINE L1 -6544 1184 1110 9 948 2454 71 3 3 chrX 47612662 47612987 -119037309 - L1_Mus1 LINE L1 -1 6566 6242 9 948 848 175 0 103 chrX 47612987 47613078 -119037218 - Lx7 LINE L1 -6619 1109 1019 9 948 1425 194 14 0 chrX 47613081 47613359 -119036937 - Lx7 LINE L1 -6974 754 473 9 948 1833 147 149 150 chrX 47613346 47613748 -119036548 - L1_Mur1 LINE L1 -1969 1945 1472 9 948 240 228 76 118 chrX 47613748 47613892 -119036404 + MER92A LTR ERV1 269 406 -6 1 948 1833 147 149 150 chrX 47613892 47614171 -119036125 - L1_Mur1 LINE L1 -1969 1471 1140 9 948 2742 217 39 0 chrX 47614176 47614696 -119035600 - Lx5 LINE L1 -261 6789 6250 1 948 10937 21 0 0 chrX 47614695 47615963 -119034333 + L1Md_T LINE L1 4319 5586 -297 1 948 8006 56 0 0 chrX 47615963 47616959 -119033337 + L1Md_T LINE L1 5587 6582 0 1 948 11949 176 34 67 chrX 47616965 47618257 -119032039 - Lx5 LINE L1 -784 6266 5005 1 948 5249 43 0 2 chrX 47618257 47618891 -119031405 + L1Md_F2 LINE L1 5937 6569 -13 1 948 11949 159 33 67 chrX 47618891 47619794 -119030502 - Lx5 LINE L1 -873 5004 4204 1 948 216 97 0 0 chrX 47619794 47619825 -119030471 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 948 11949 159 33 67 chrX 47619825 47620504 -119029792 - Lx5 LINE L1 -1674 4203 3463 1 948 1207 234 31 4 chrX 47620505 47620762 -119029534 - MTC LTR MaLR -52 369 106 1 948 4737 98 10 0 chrX 47620762 47621588 -119028708 - L1_Mus4 LINE L1 -617 6021 5190 1 948 4332 95 0 0 chrX 47621593 47622193 -119028103 + L1_Mus4 LINE L1 6037 6636 0 1 948 417 159 114 0 chrX 47622219 47622307 -119027989 - MTC LTR MaLR -323 98 1 1 948 277 193 42 0 chrX 47622372 47622458 -119027838 - L1M2 LINE L1 -475 5837 5749 1 948 246 88 0 0 chrX 47622517 47622551 -119027745 + B3 SINE B2 35 68 -148 1 948 2168 169 29 13 chrX 47622554 47623004 -119027292 - Lx5 LINE L1 -2416 3461 3005 1 948 1694 52 0 0 chrX 47623002 47623213 -119027083 + L1_Mus1 LINE L1 6357 6567 0 1 948 8934 151 48 6 chrX 47623213 47624121 -119026175 - Lx5 LINE L1 -2866 3011 2073 1 948 228 111 0 0 chrX 47624121 47624157 -119026139 + (TGG)n Simple_repeat Simple_repeat 1 36 0 1 948 8934 189 90 27 chrX 47624157 47625570 -119024726 - Lx5 LINE L1 -3805 2072 549 1 948 198 191 0 0 chrX 47625808 47625855 -119024441 + CT-rich Low_complexity Low_complexity 3 49 0 1 948 6296 137 56 1 chrX 47625910 47627085 -119023211 - Lx LINE L1 0 6654 5408 1 948 270 56 0 0 chrX 47627085 47627121 -119023175 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1 948 6296 169 23 4 chrX 47627121 47627813 -119022483 - Lx LINE L1 -476 5407 4707 1 948 1182 108 5 0 chrX 47627804 47627998 -119022298 - MusHAL1 LINE L1 -2201 511 317 1 948 1848 249 0 16 chrX 47627996 47628445 -119021851 - L1VL4 LINE L1 -5676 626 185 1 948 9265 119 28 1 chrX 47628470 47629918 -119020378 + Lx2A1 LINE L1 5519 7002 -6 1 948 195 129 0 0 chrX 47629978 47630009 -119020287 + (T)n Simple_repeat Simple_repeat 1 31 0 1 948 227 300 92 89 chrX 47631282 47631564 -119018732 - MER34A LTR ERV1 -68 503 221 1 948 25 0 0 0 chrX 47632091 47632116 -119018180 + AT_rich Low_complexity Low_complexity 1 25 0 1 948 660 335 114 33 chrX 47632338 47632381 -119017915 - L1M5 LINE L1 -2177 3969 3928 1 948 1069 274 82 17 chrX 47632381 47632734 -119017562 - MTE2a LTR MaLR -3 376 1 1 948 660 335 114 33 chrX 47632734 47633262 -119017034 - L1M5 LINE L1 -2219 3927 3352 1 948 266 290 69 78 chrX 47633268 47633384 -119016912 - PB1D10 SINE Alu 0 117 3 1 948 635 266 78 17 chrX 47633703 47633883 -119016413 - B3 SINE B2 -23 193 3 1 948 280 331 70 6 chrX 47634174 47634332 -119015964 - L1M5 LINE L1 -3371 2775 2608 1 948 266 167 0 16 chrX 47634541 47634602 -119015694 + CT-rich Low_complexity Low_complexity 5 64 0 1 948 283 322 51 17 chrX 47634639 47634756 -119015540 - B1F1 SINE Alu -1 148 28 1 948 259 299 0 78 chrX 47634739 47634855 -119015441 - MLT1D LTR MaLR -356 149 43 1 948 354 23 0 0 chrX 47636293 47636336 -119013960 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 948 610 311 152 3 chrX 47636488 47636804 -119013492 + Lx8 LINE L1 6904 7266 -207 1 948 1168 69 126 0 chrX 47637077 47637251 -119013045 - L1_Mus2 LINE L1 0 6566 6371 1 948 373 83 0 0 chrX 47637415 47637463 -119012833 - HAL1-3A_ME LINE L1 -835 2023 1976 1 948 202 206 32 0 chrX 47637463 47637526 -119012770 + (TG)n Simple_repeat Simple_repeat 1 65 0 1 948 10090 97 7 1 chrX 47637656 47639137 -119011159 - L1_Mm LINE L1 -3092 2791 1301 1 948 1135 110 4 4 chrX 47639136 47639317 -119010979 + L1_Mus1 LINE L1 6164 6350 -234 1 948 21 0 0 0 chrX 47640374 47640395 -119009901 + AT_rich Low_complexity Low_complexity 1 21 0 1 948 568 256 7 22 chrX 47640405 47640541 -119009755 + B1_Mur4 SINE Alu 11 144 -6 1 948 476 246 60 28 chrX 47640783 47641000 -119009296 + Lx9 LINE L1 7417 7640 -4 1 948 182 156 0 22 chrX 47641614 47641660 -119008636 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 1 948 192 97 0 0 chrX 47643356 47643387 -119006909 + (TTTTTG)n Simple_repeat Simple_repeat 3 33 0 1 948 254 288 0 0 chrX 47643395 47643454 -119006842 - tRNA-Ala-GCY_ tRNA tRNA -8 67 9 1 948 265 331 51 51 chrX 47643473 47643610 -119006686 - B1F1 SINE Alu -8 141 5 1 948 1516 38 0 0 chrX 47645344 47645527 -119004769 + L1_Mus1 LINE L1 6384 6566 -1 1 948 423 0 0 0 chrX 47645600 47645647 -119004649 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 948 200 198 0 59 chrX 47645679 47645797 -119004499 + (TCTCTG)n Simple_repeat Simple_repeat 2 112 0 1 948 734 309 19 5 chrX 47646154 47646362 -119003934 - B3 SINE B2 0 216 6 1 948 476 250 0 0 chrX 47646580 47646692 -119003604 + L1_Mur1 LINE L1 208 319 -6665 1 948 3918 99 69 2 chrX 47646688 47647706 -119002590 + L1_Mur1 LINE L1 712 1797 -4089 1 948 2217 71 9 22 chrX 47647706 47648023 -119002273 + Lx3_Mus LINE L1 6695 7007 -2 1 948 1046 357 79 44 chrX 47648298 47649121 -119001175 + L4 LINE RTE 31 882 -1147 1 948 201 74 0 0 chrX 47649184 47649211 -119001085 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 948 6202 234 112 43 chrX 47649296 47649936 -119000360 - Lx9 LINE L1 -9 7635 6957 1 948 612 0 0 0 chrX 47649936 47650004 -119000292 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 1 948 6202 229 89 48 chrX 47650004 47651556 -118998740 - Lx9 LINE L1 -688 6956 5253 1 948 346 65 32 0 chrX 47651556 47651618 -118998678 + (TTTG)n Simple_repeat Simple_repeat 1 64 0 1 948 5198 222 54 54 chrX 47651618 47652654 -118997642 - Lx9 LINE L1 -595 5252 4208 1 948 1496 300 101 29 chrX 47652686 47653571 -118996725 - L1MC2 LINE L1 -39 6305 5358 1 948 417 272 170 39 chrX 47653610 47653969 -118996327 - L1MA7 LINE L1 -29 6262 5857 1 948 348 24 0 0 chrX 47654019 47654060 -118996236 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 948 541 290 14 20 chrX 47654061 47654209 -118996087 - RSINE1 SINE B4 -15 150 4 1 948 308 357 8 16 chrX 47654268 47654396 -118995900 + Tigger5 DNA MER2_type 14 140 -2266 1 948 3814 211 58 13 chrX 47654465 47654633 -118995663 + L1_Mur2 LINE L1 1678 1851 -4029 1 948 2561 109 33 13 chrX 47654633 47655024 -118995272 - MTB LTR MaLR -1 399 1 1 948 3814 211 58 13 chrX 47655024 47655236 -118995060 + L1_Mur2 LINE L1 1852 2067 -3813 1 948 318 26 0 0 chrX 47655236 47655275 -118995021 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 948 3814 211 58 13 chrX 47655275 47655827 -118994469 + L1_Mur2 LINE L1 2068 2653 -3227 1 948 8757 186 33 13 chrX 47655824 47657712 -118992584 + L1_Mur2 LINE L1 3527 5453 -424 1 948 951 98 0 0 chrX 47657711 47657844 -118992452 - Lx2 LINE L1 -1072 5925 5793 1 948 7064 108 18 11 chrX 47657844 47658907 -118991389 + Lx2 LINE L1 5925 6994 -3 1 948 952 115 102 0 chrX 47658926 47659083 -118991213 + L1Md_F LINE L1 277 449 -6070 1 948 2698 204 233 14 chrX 47659081 47659436 -118990860 + L1_Mm LINE L1 4619 5003 -874 1 948 6637 32 0 0 chrX 47659436 47660217 -118990079 - L1Md_A LINE L1 -2 6580 5800 1 948 2698 204 233 14 chrX 47660217 47660419 -118989877 + L1_Mm LINE L1 5004 5330 -547 1 948 8934 6 0 0 chrX 47660419 47661415 -118988881 + L1Md_A LINE L1 5587 6582 0 1 948 3208 45 27 2 chrX 47661415 47661833 -118988463 + L1_Mm LINE L1 5331 5815 -68 1 948 7160 87 24 2 chrX 47661833 47663430 -118986866 + L1_Mus2 LINE L1 4929 6566 0 1 948 1867 261 82 31 chrX 47663457 47664041 -118986255 + Lx5 LINE L1 6457 7050 0 1 948 229 254 0 0 chrX 47664059 47664114 -118986182 - L1MC LINE L1 -1191 4955 4901 1 948 3850 131 10 10 chrX 47664123 47664748 -118985548 + Lx2 LINE L1 6373 6997 0 1 948 418 314 37 16 chrX 47664816 47665062 -118985234 - L1MC LINE L1 -1888 4258 4008 1 948 706 180 29 50 chrX 47665120 47665260 -118985036 - B1_Mur4 SINE Alu 0 150 14 1 948 500 267 85 9 chrX 47665275 47665487 -118984809 - L1MC LINE L1 -2430 3716 3489 1 948 251 194 0 31 chrX 47665612 47665676 -118984620 + CT-rich Low_complexity Low_complexity 4 65 0 1 948 226 213 0 0 chrX 47665679 47665726 -118984570 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 948 578 326 31 0 chrX 47665858 47666054 -118984242 - Lx8 LINE L1 -349 7124 6923 1 948 364 256 25 91 chrX 47666239 47666437 -118983859 - L1MD LINE L1 -2844 3302 3118 1 948 331 239 14 0 chrX 47666447 47666518 -118983778 - MLT1A0 LTR MaLR -259 106 35 1 948 1041 260 69 14 chrX 47666639 47667204 -118983092 + L1MB8 LINE L1 5209 5803 -381 1 948 967 67 0 7 chrX 47667214 47667349 -118982947 - B1_Mm SINE Alu -5 142 9 1 948 343 254 63 32 chrX 47667362 47667488 -118982808 + L1MB8 LINE L1 5788 5917 -261 1 948 22366 158 19 9 chrX 47667869 47673626 -118976670 + Lx LINE L1 841 6653 -1 1 948 192 413 64 23 chrX 47673657 47673875 -118976421 + L4 LINE RTE 1514 1740 -289 1 948 1571 205 15 0 chrX 47675530 47675866 -118974430 + Lx LINE L1 6311 6651 -3 1 948 497 81 0 0 chrX 47675953 47676027 -118974269 - L1_Mm LINE L1 -3131 2752 2679 1 948 6936 69 3 0 chrX 47676023 47676964 -118973332 + L1_Mus1 LINE L1 5624 6567 0 1 948 1394 48 16 0 chrX 47679985 47680174 -118970122 + L1Md_F2 LINE L1 6364 6555 -27 1 948 180 0 0 0 chrX 47680778 47680798 -118969498 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1 948 261 287 73 27 chrX 47681853 47682013 -118968283 + L1ME2 LINE L1 6003 6171 -8 1 948 423 0 0 0 chrX 47682179 47682226 -118968070 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 1 948 401 36 18 0 chrX 47682437 47682492 -118967804 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 948 3121 170 38 73 chrX 47682623 47682691 -118967605 + RMER6C LTR ERVK 1 65 -625 1 948 2606 113 4 100 chrX 47682691 47683173 -118967123 + Lx2A LINE L1 6564 6999 -9 1 948 3121 170 38 73 chrX 47683173 47683819 -118966477 + RMER6C LTR ERVK 66 690 0 1 948 1490 271 35 31 chrX 47684234 47684465 -118965831 + Lx8 LINE L1 6901 7131 -342 1 948 2640 187 145 33 chrX 47684465 47685128 -118965168 + RMER19A LTR ERVK 1 737 0 1 948 1490 271 35 31 chrX 47685128 47685467 -118964829 + Lx8 LINE L1 7132 7473 0 1 948 180 0 0 0 chrX 47685473 47685493 -118964803 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1 948 208 291 36 0 chrX 47685760 47685815 -118964481 + L2c LINE L2 3281 3337 -50 1 948 25 31 0 0 chrX 47685880 47685912 -118964384 + AT_rich Low_complexity Low_complexity 1 32 0 1 948 201 74 0 0 chrX 47686006 47686033 -118964263 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1 948 2789 69 3 33 chrX 47687063 47687392 -118962904 - L1Md_F2 LINE L1 -1 6581 6264 1 948 5373 88 59 99 chrX 47687392 47688322 -118961974 - RLTR13B1 LTR ERVK 0 893 1 1 948 2789 69 3 33 chrX 47688322 47688381 -118961915 - L1Md_F2 LINE L1 -319 6263 6205 1 948 1161 97 0 0 chrX 47688382 47688537 -118961759 + B2_Mm2 SINE B2 4 158 -37 1 948 525 124 0 0 chrX 47688792 47688889 -118961407 + (CA)n Simple_repeat Simple_repeat 1 97 0 1 948 395 231 0 32 chrX 47688998 47689092 -118961204 + Lx7 LINE L1 7168 7258 -438 1 948 1582 295 67 12 chrX 47689096 47689680 -118960616 - Lx8 LINE L1 -607 6866 6251 2 948 1945 120 14 100 chrX 47689705 47690065 -118960231 + ORR1A4 LTR MaLR 1 329 0 2 948 2203 153 0 36 chrX 47690786 47691178 -118959118 - RMER6B LTR ERVK -80 381 4 2 948 3673 152 128 62 chrX 47691183 47692476 -118957820 - MYSERV6-int LTR ERVK -1197 7762 6324 2 948 346 174 27 68 chrX 47692476 47692550 -118957746 - PB1D7 SINE Alu -49 71 1 2 948 3673 152 128 62 chrX 47692550 47692909 -118957387 - MYSERV6-int LTR ERVK -1197 6323 5923 2 948 3281 170 18 16 chrX 47692911 47693516 -118956780 - RMER17B LTR ERVK -1 957 352 2 948 1711 166 12 15 chrX 47693518 47693842 -118956454 - MYSERV6-int LTR ERVK -3638 5321 4999 2 948 708 110 15 30 chrX 47693903 47694034 -118956262 - MYSERV6-int LTR ERVK -3941 5018 4890 2 948 1088 80 0 0 chrX 47694035 47694173 -118956123 + B1_Mus1 SINE Alu 2 139 -9 2 948 279 0 0 0 chrX 47694173 47694204 -118956092 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 948 1308 103 21 0 chrX 47694220 47694414 -118955882 + ORR1A2 LTR MaLR 122 319 -8 2 948 1207 127 14 9 chrX 47694418 47694632 -118955664 + ORR1A2-int LTR MaLR 1 215 -1748 2 948 1306 134 56 13 chrX 47694633 47694867 -118955429 - L1_Mus2 LINE L1 0 6638 6395 2 948 33802 47 0 5 chrX 47694872 47700262 -118950034 + L1Md_T LINE L1 129 5589 -297 2 948 8469 33 0 0 chrX 47700262 47701256 -118949040 + L1Md_T LINE L1 5590 6583 -2 2 948 17767 126 16 10 chrX 47701266 47704803 -118945493 - L1_Mus2 LINE L1 -206 6360 2811 2 948 15259 59 3 4 chrX 47704803 47706144 -118944152 - L1Md_F2 LINE L1 0 6582 5243 2 948 5424 74 8 0 chrX 47706144 47706859 -118943437 - L1Md_F2 LINE L1 -12 6570 5850 2 948 15259 68 7 0 chrX 47706859 47708342 -118941954 - L1Md_F2 LINE L1 -641 5242 3747 2 948 198 0 0 0 chrX 47708356 47708378 -118941918 + (TTA)n Simple_repeat Simple_repeat 3 24 0 2 118 32305 85 9 4 chrX 47708378 47714289 -118936007 - L1Md_F2 LINE L1 -24 6558 625 2 949 8140 134 56 15 chrX 47714285 47714647 -118935649 - L1Md_F2 LINE L1 -3061 2822 2458 2 949 200 59 29 0 chrX 47714647 47714681 -118935615 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 949 8140 141 40 15 chrX 47714681 47716410 -118933886 - L1Md_F2 LINE L1 -3426 2457 668 2 949 8826 160 73 11 chrX 47716422 47718152 -118932144 + ORR1A2-int LTR MaLR 124 1963 0 2 949 1863 128 14 18 chrX 47718154 47718439 -118931857 + ORR1A2 LTR MaLR 3 286 -41 2 949 1092 121 63 0 chrX 47718439 47718613 -118931683 + B2_Mm2 SINE B2 1 185 -10 2 949 6134 159 41 40 chrX 47718614 47719543 -118930753 - MYSERV6-int LTR ERVK -4057 4902 3965 2 949 3197 45 15 2 chrX 47719543 47719944 -118930352 - L1Md_F2 LINE L1 -12 6570 6165 2 949 6134 159 41 40 chrX 47719944 47720343 -118929953 - MYSERV6-int LTR ERVK -4995 3964 3572 2 949 1661 174 34 3 chrX 47720347 47720642 -118929654 + RLTR19 LTR ERVK 1 304 -195 2 949 2648 78 2 0 chrX 47720642 47721039 -118929257 - L1VL4 LINE L1 -5325 977 580 2 949 6391 168 77 33 chrX 47721041 47722445 -118927851 - MYSERV6-int LTR ERVK -6478 2481 1055 2 949 2994 78 24 2 chrX 47722445 47722857 -118927439 + BGLII LTR ERVK 1 421 0 2 949 6391 155 41 33 chrX 47722857 47723174 -118927122 - MYSERV6-int LTR ERVK -7905 1054 745 2 949 1358 245 66 66 chrX 47723169 47723716 -118926580 - MYSERV6-int LTR ERVK -8406 553 7 2 949 814 202 17 23 chrX 47723721 47723898 -118926398 - RMER6B LTR ERVK -2 459 284 2 949 1818 159 0 16 chrX 47723920 47724234 -118926062 + Lx LINE L1 6342 6650 -4 2 949 1067 147 14 54 chrX 47724243 47724466 -118925830 - RMER6B LTR ERVK -165 296 83 2 949 2150 333 29 45 chrX 47724708 47725820 -118924476 - RodERV21-int LTR ERV1 -105 4886 3793 2 949 183 80 0 0 chrX 47729575 47729600 -118920696 + (TA)n Simple_repeat Simple_repeat 1 25 0 2 949 1988 318 40 59 chrX 47729716 47730828 -118919468 - RodERV21-int LTR ERV1 -1184 3807 2718 2 949 320 329 36 34 chrX 47730893 47731280 -118919016 - MER52-int LTR ERV1 -1319 5772 5671 2 949 31056 100 7 11 chrX 47731802 47736847 -118913449 + L1Md_T LINE L1 559 5586 -297 2 949 8149 55 0 0 chrX 47736847 47737843 -118912453 + L1Md_T LINE L1 5587 6582 0 2 949 351 0 0 0 chrX 47737848 47737887 -118912409 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2 949 9584 24 5 23 chrX 47737887 47739035 -118911261 + L1Md_T LINE L1 4459 5586 -297 2 949 8605 32 1 0 chrX 47739035 47740030 -118910266 + L1Md_T LINE L1 5587 6582 0 2 949 9547 46 1 1 chrX 47740031 47741191 -118909105 + L1Md_T LINE L1 4427 5586 -297 2 949 8572 36 0 0 chrX 47741191 47742187 -118908109 + L1Md_T LINE L1 5587 6582 0 2 949 480 132 0 8 chrX 47742206 47742293 -118908003 + L1_Mm LINE L1 4595 4678 -1208 2 949 4568 64 7 0 chrX 47742278 47742853 -118907443 + L1_Mm LINE L1 5169 5747 -136 2 949 612 87 0 0 chrX 47742853 47742947 -118907349 + L1Md_F3 LINE L1 6465 6558 -26 2 949 354 115 0 0 chrX 47742947 47743008 -118907288 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 949 274 71 24 0 chrX 47743071 47743113 -118907183 + RMER2 LTR ERV1 525 567 0 2 949 314 208 56 0 chrX 47743158 47743230 -118907066 + Lx4A LINE L1 6068 6143 -915 2 949 806 168 28 0 chrX 47743523 47743666 -118906630 - Lx2B LINE L1 -428 6572 6426 2 949 1135 132 25 126 chrX 47743666 47743951 -118906345 - RLTR22_Mur LTR ERVK 0 1848 1593 2 949 1976 146 29 6 chrX 47744046 47744397 -118905899 - L1_Mur1 LINE L1 -954 4932 4574 2 949 7091 67 0 8 chrX 47744526 47745431 -118904865 - L1Md_F2 LINE L1 -1 6581 5684 2 949 33708 29 76 0 chrX 47745430 47747585 -118902711 - L1Md_T LINE L1 -1 6581 4427 2 949 400 19 0 0 chrX 47747585 47747638 -118902658 - L1Md_T LINE L1 0 6582 6530 2 949 33708 24 83 11 chrX 47747638 47751400 -118898896 - L1Md_T LINE L1 -1457 4426 235 2 949 17744 148 28 18 chrX 47751391 47754973 -118895323 - L1VL4 LINE L1 -1441 4442 823 2 949 236 132 0 0 chrX 47754939 47754977 -118895319 - L1VL4 LINE L1 -6009 293 256 2 949 550 235 20 7 chrX 47755104 47755254 -118895042 - L1VL4 LINE L1 -5790 826 675 2 949 404 216 0 22 chrX 47755296 47755386 -118894910 - L1Md_F LINE L1 -5778 741 654 2 949 3066 147 4 45 chrX 47755912 47756383 -118893913 - L1_Mus3 LINE L1 -15 6623 6173 2 949 1166 49 0 14 chrX 47756383 47756529 -118893767 + B1_Mm SINE Alu 1 144 -3 2 949 411 21 0 0 chrX 47756529 47756577 -118893719 + (GA)n Simple_repeat Simple_repeat 2 49 0 2 949 3066 147 4 45 chrX 47756577 47756640 -118893656 - L1_Mus3 LINE L1 -466 6172 6111 2 949 5444 156 13 1 chrX 47756651 47757283 -118893013 + L1_Mus3 LINE L1 3430 4062 -1821 2 949 459 0 0 0 chrX 47757283 47757334 -118892962 + (TC)n Simple_repeat Simple_repeat 1 51 0 2 949 5444 156 13 1 chrX 47757334 47757684 -118892612 + L1_Mus3 LINE L1 4063 4423 -1460 2 949 20676 117 9 25 chrX 47757659 47758989 -118891307 + L1_Mus3 LINE L1 1780 3104 -2779 2 949 1009 0 0 0 chrX 47758989 47759096 -118891200 + U6 snRNA snRNA 1 107 0 2 949 20676 124 9 33 chrX 47759096 47761300 -118888996 + L1_Mus3 LINE L1 3092 4997 -886 2 949 1586 40 0 10 chrX 47761300 47761501 -118888795 + L1Md_F3 LINE L1 6372 6570 -14 2 949 19485 160 24 50 chrX 47761501 47763556 -118886740 + L1_Mus3 LINE L1 4987 6957 -40 2 949 2966 85 17 127 chrX 47763556 47764098 -118886198 + RLTR45 LTR ERVK 1 482 0 2 949 3648 238 62 106 chrX 47764098 47764143 -118886153 + L1_Mus3 LINE L1 6958 6996 -1 2 949 318 26 0 0 chrX 47764164 47764203 -118886093 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 949 363 260 49 49 chrX 47764205 47764367 -118885929 - RodERV21-int LTR ERV1 -3375 4832 4671 2 949 488 335 29 45 chrX 47765185 47765629 -118884667 - RodERV21-int LTR ERV1 -3017 4074 3638 2 949 1270 31 25 0 chrX 47765656 47765816 -118884480 - L1Md_F3 LINE L1 0 6584 6421 2 949 2501 248 21 40 chrX 47765976 47766581 -118883715 - RodERV21-int LTR ERV1 -2273 2718 2125 2 949 5716 51 36 3 chrX 47766581 47767304 -118882992 - L1Md_F2 LINE L1 0 6582 5836 2 949 2037 112 15 6 chrX 47767312 47767637 -118882659 - RLTR10 LTR ERVK -9 328 1 2 949 5680 71 33 12 chrX 47767639 47768394 -118881902 - IAPEz-int LTR ERVK -2 6479 5709 2 949 3154 22 0 0 chrX 47768385 47768742 -118881554 - IAPEz-int LTR ERVK -2124 4357 4001 2 949 11256 104 84 24 chrX 47768740 47771353 -118878943 - IAPEz-int LTR ERVK -3707 2774 6 2 949 3240 44 3 0 chrX 47771353 47771740 -118878556 - RLTR10 LTR ERVK -2 388 1 2 949 3684 280 20 19 chrX 47771748 47772774 -118877522 - RodERV21-int LTR ERV1 -2859 2132 1106 2 949 904 272 36 59 chrX 47772845 47773232 -118877064 - RodERV21-int LTR ERV1 -3903 1088 711 2 949 301 267 80 99 chrX 47773180 47773342 -118876954 - RMER17C-int LTR ERVK -2705 533 375 2 949 369 62 0 0 chrX 47773759 47773807 -118876489 + (CAG)n Simple_repeat Simple_repeat 2 49 0 2 949 544 175 0 0 chrX 47774406 47774503 -118875793 - RMER6B LTR ERVK -364 97 1 2 949 211 225 0 0 chrX 47774553 47774593 -118875703 + B3 SINE B2 1 40 -176 2 949 1216 272 124 22 chrX 47775111 47775903 -118874393 + RMER1B Other Other 1 450 -616 2 949 2530 266 184 17 chrX 47775904 47776715 -118873581 + RMER1A Other Other 82 1027 -3 2 949 258 311 121 11 chrX 47776725 47776816 -118873480 + Lx6 LINE L1 7283 7383 -77 2 949 754 290 6 0 chrX 47776858 47777041 -118873255 + B3 SINE B2 27 210 -6 2 949 372 43 0 0 chrX 47777610 47777656 -118872640 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 949 212 59 0 29 chrX 47777704 47777739 -118872557 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 949 23 0 0 0 chrX 47778406 47778429 -118871867 + AT_rich Low_complexity Low_complexity 1 23 0 2 949 207 0 0 0 chrX 47778478 47778501 -118871795 + (TTTTG)n Simple_repeat Simple_repeat 4 26 0 2 949 200 79 0 50 chrX 47780705 47780745 -118869551 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2 949 690 302 92 11 chrX 47780930 47781201 -118869095 + MamRep434 DNA TcMar 94 386 -40 2 949 269 316 143 13 chrX 47781967 47782121 -118868175 - MIR SINE MIR -22 240 67 2 949 427 282 176 11 chrX 47782625 47782887 -118867409 + L2 LINE L2 1894 2198 -1221 2 949 2595 199 64 61 chrX 47782981 47783590 -118866706 + RMER19C LTR ERVK 1 611 0 2 949 209 302 0 34 chrX 47783654 47783743 -118866553 + (CATATA)n Simple_repeat Simple_repeat 3 88 0 2 949 189 214 0 0 chrX 47783764 47783806 -118866490 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 949 336 264 64 77 chrX 47784539 47784695 -118865601 + MIR3 SINE MIR 54 207 -1 2 949 537 236 101 47 chrX 47785412 47785581 -118864715 + B2_Mm2 SINE B2 1 178 -17 2 949 760 349 26 33 chrX 47786819 47787092 -118863204 - B4A SINE B4 -21 271 1 2 949 547 303 49 76 chrX 47787231 47787598 -118862698 + MLT1C LTR MaLR 4 463 -4 2 949 1010 271 120 39 chrX 47787983 47788541 -118861755 - Lx8 LINE L1 -3 7470 6868 2 949 1712 212 9 57 chrX 47788666 47789016 -118861280 + ORR1C1 LTR MaLR 6 338 -40 2 949 1374 13 0 0 chrX 47789017 47789176 -118861120 + B2_Mm1a SINE B2 2 160 -33 2 949 558 0 0 0 chrX 47789176 47789238 -118861058 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 2 949 376 130 0 0 chrX 47789238 47789292 -118861004 + ORR1C1 LTR MaLR 324 377 -1 2 949 267 388 52 27 chrX 47789589 47789918 -118860378 - L2 LINE L2 -456 2963 2627 2 949 709 146 0 21 chrX 47790149 47790289 -118860007 - Lx LINE L1 -4 6650 6514 2 949 2003 108 0 31 chrX 47790308 47790625 -118859671 - L1Md_F2 LINE L1 0 6582 6276 2 949 5001 45 64 0 chrX 47790625 47791443 -118858853 + L1Md_F2 LINE L1 5428 6283 -299 2 949 973 175 71 20 chrX 47791445 47791643 -118858653 - Lx LINE L1 -133 6521 6314 2 949 1357 56 0 15 chrX 47791643 47791843 -118858453 - L1Md_F3 LINE L1 0 6584 6388 2 949 8841 127 7 10 chrX 47791845 47793777 -118856519 - Lx LINE L1 -347 6307 4385 2 949 3878 224 31 101 chrX 47793780 47794241 -118856055 - Lx6 LINE L1 -763 6697 6271 2 949 1052 67 45 79 chrX 47794241 47794418 -118855878 + L1_Mus1 LINE L1 6397 6567 0 2 949 3878 193 21 76 chrX 47794418 47795463 -118854833 - Lx6 LINE L1 -1190 6270 5302 2 949 266 160 101 51 chrX 47795531 47795610 -118854686 + RLTR19-int LTR ERVK 3191 3273 -2864 2 949 2107 191 16 117 chrX 47795803 47796195 -118854101 + RMER19C LTR ERVK 158 492 -119 2 949 279 0 0 0 chrX 47796195 47796226 -118854070 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 949 2107 191 16 117 chrX 47796226 47796338 -118853958 + RMER19C LTR ERVK 493 610 -1 2 949 342 184 0 0 chrX 47796387 47796463 -118853833 + (TG)n Simple_repeat Simple_repeat 2 77 0 2 949 530 168 0 86 chrX 47796472 47796589 -118853707 + RMER17C-int LTR ERVK 2875 2981 -257 2 949 697 200 89 5 chrX 47796616 47796807 -118853489 + RMER17C-int LTR ERVK 3032 3238 0 2 949 226 206 16 0 chrX 47797130 47797193 -118853103 - Lx6 LINE L1 -562 5315 5252 2 949 4188 219 58 28 chrX 47797202 47798378 -118851918 - Lx6 LINE L1 -6507 1221 56 2 949 1844 207 133 55 chrX 47798381 47798672 -118851624 - L1_Rod LINE L1 -539 5308 4995 2 949 441 54 0 0 chrX 47798672 47798728 -118851568 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 949 1844 207 133 55 chrX 47798728 47799152 -118851144 - L1_Rod LINE L1 -853 4994 4537 2 949 494 219 88 94 chrX 47799164 47799405 -118850891 - L1_Rod LINE L1 -2274 3869 3597 2 949 7910 38 6 1 chrX 47799413 47800604 -118849692 - L1Md_F3 LINE L1 -2 6582 5387 2 949 6378 218 47 92 chrX 47800641 47803042 -118847254 - L1_Rod LINE L1 -2271 3576 1286 2 949 2727 216 19 39 chrX 47803031 47803647 -118846649 - Lx5 LINE L1 0 7050 6447 2 949 280 180 0 0 chrX 47803646 47803696 -118846600 - Lx4B LINE L1 -548 6510 6461 2 949 1624 186 45 13 chrX 47803701 47804076 -118846220 - L1_Rod LINE L1 -6303 1305 919 2 949 609 173 0 0 chrX 47804172 47804282 -118846014 + L1_Mur2 LINE L1 400 509 -6577 2 949 2999 141 45 19 chrX 47804274 47805013 -118845283 + L1_Mur2 LINE L1 691 1451 -4426 2 949 402 198 0 146 chrX 47805013 47805143 -118845153 + MT2B LTR ERVL 154 264 -337 3 949 1073 95 0 0 chrX 47805031 47805178 -118845118 + B1_Mus1 SINE Alu 2 148 0 3 949 4948 160 69 29 chrX 47805186 47805892 -118844404 + L1_Mur2 LINE L1 1454 2161 -3716 2 949 3686 90 13 9 chrX 47805892 47806419 -118843877 + L1Md_F2 LINE L1 6052 6580 -2 3 949 4948 160 69 29 chrX 47806419 47806906 -118843390 + L1_Mur2 LINE L1 2162 2695 -3182 2 949 329 176 0 0 chrX 47806895 47806963 -118843333 + L1_Mur2 LINE L1 5514 5581 -296 2 949 7230 75 8 23 chrX 47806964 47807973 -118842323 + L1Md_F2 LINE L1 5589 6582 0 3 949 826 293 2 53 chrX 47808394 47808790 -118841506 + L1MB8 LINE L1 5798 6173 -5 3 949 318 312 35 7 chrX 47809001 47809146 -118841150 + L1MA6 LINE L1 6108 6256 -44 3 949 739 287 43 0 chrX 47809156 47809344 -118840952 + B3A SINE B2 3 198 0 3 949 883 198 44 52 chrX 47809360 47809610 -118840686 - Lx4B LINE L1 -10 7048 6801 3 949 1041 132 21 16 chrX 47809608 47809800 -118840496 - Lx4B LINE L1 -962 6096 5904 3 949 1476 212 8 80 chrX 47809800 47810199 -118840097 - MERVL_2A-int LTR ERVL -5387 374 5 3 949 3543 145 49 3 chrX 47810203 47810778 -118839518 - MT2B LTR ERVL 0 601 1 3 949 1182 143 0 0 chrX 47810778 47810974 -118839322 - Lx2B LINE L1 -1100 5900 5705 3 949 23 33 0 0 chrX 47810977 47811007 -118839289 + AT_rich Low_complexity Low_complexity 1 30 0 3 949 3602 78 2 2 chrX 47811848 47812351 -118837945 + L1Md_F2 LINE L1 5076 5578 -305 3 949 7417 78 2 1 chrX 47812359 47813341 -118836955 + L1Md_F2 LINE L1 5588 6570 -12 3 949 37789 33 4 6 chrX 47813413 47820008 -118830288 - L1Md_A LINE L1 0 6582 7 3 949 479 345 90 0 chrX 47820170 47820315 -118829981 + RSINE1 SINE B4 4 161 -4 3 949 301 360 11 0 chrX 47820347 47820436 -118829860 + RSINE1 SINE B4 2 91 -74 3 949 25 0 0 0 chrX 47820436 47820461 -118829835 + AT_rich Low_complexity Low_complexity 1 25 0 3 949 2349 66 119 11 chrX 47822164 47822516 -118827780 - RLTR10 LTR ERVK 0 390 1 3 949 183 80 0 0 chrX 47822830 47822855 -118827441 + (A)n Simple_repeat Simple_repeat 1 25 0 3 949 4684 199 55 22 chrX 47824268 47825350 -118824946 + Lx7 LINE L1 6238 7354 -342 3 949 2565 203 82 47 chrX 47825403 47826195 -118824101 - Lx3C LINE L1 0 7000 6156 3 949 226 184 0 0 chrX 47826245 47826283 -118824013 - Lx2A LINE L1 -756 6252 6215 3 949 2331 153 5 0 chrX 47826289 47826693 -118823603 + L1_Mur1 LINE L1 5177 5582 -304 3 949 482 184 201 73 chrX 47826695 47826983 -118823313 + Lx7 LINE L1 7366 7690 -6 3 949 830 64 0 23 chrX 47827245 47827373 -118822923 + L1Md_F2 LINE L1 6458 6582 0 3 949 207 217 22 0 chrX 47827776 47827822 -118822474 + CT-rich Low_complexity Low_complexity 2 48 0 3 949 363 296 17 34 chrX 47827989 47828167 -118822129 - L1MA6 LINE L1 -11 6289 6115 3 949 1857 229 14 21 chrX 47828201 47828630 -118821666 + Lx6 LINE L1 7009 7434 -26 3 949 216 0 0 0 chrX 47828795 47828819 -118821477 + (A)n Simple_repeat Simple_repeat 1 24 0 3 949 256 310 155 0 chrX 47829213 47829342 -118820954 - B1F SINE Alu 0 149 1 3 949 264 310 140 0 chrX 47830016 47830116 -118820180 - PB1D10 SINE Alu -2 115 2 3 949 288 0 0 0 chrX 47831231 47831263 -118819033 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 949 1280 159 0 0 chrX 47831265 47831497 -118818799 - L1_Mur2 LINE L1 -1197 4680 4449 3 949 1163 144 0 5 chrX 47831494 47831711 -118818585 + L1_Mur2 LINE L1 2919 3134 -2743 3 949 5806 129 38 86 chrX 47831709 47832071 -118818225 - L1_Mur2 LINE L1 -3461 2416 2061 3 949 417 54 0 0 chrX 47832071 47832127 -118818169 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 949 5806 134 34 72 chrX 47832127 47833268 -118817028 - L1_Mur2 LINE L1 -3817 2060 973 3 949 30632 100 16 4 chrX 47833317 47839145 -118811151 - L1_Mus2 LINE L1 0 6566 675 3 949 1933 210 80 2 chrX 47839173 47839650 -118810646 - L1_Mur2 LINE L1 -6123 963 450 3 949 253 337 168 29 chrX 47840267 47840618 -118809678 + L2a LINE L2 2977 3376 -50 3 949 219 114 0 0 chrX 47840780 47840815 -118809481 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3 949 351 244 0 0 chrX 47840982 47841072 -118809224 - Lx9 LINE L1 -592 7052 6963 3 950 1058 180 160 14 chrX 47841639 47841921 -118808375 - L3 LINE CR1 -2155 2334 2012 3 950 1488 58 5 0 chrX 47842642 47842830 -118807466 - B2_Mm2 SINE B2 -6 189 1 3 950 1009 228 0 0 chrX 47843217 47843419 -118806877 - B3 SINE B2 -10 206 5 3 950 191 306 102 67 chrX 47844410 47844550 -118805746 - MIR SINE MIR -80 188 28 3 950 462 303 78 49 chrX 47846484 47846689 -118803607 - B3 SINE B2 -5 211 1 3 950 458 129 31 94 chrX 47847135 47847263 -118803033 - L1_Mus3 LINE L1 -75 6563 6444 3 950 293 347 41 8 chrX 47848219 47848341 -118801955 + B1F SINE Alu 22 147 -2 3 950 308 362 127 0 chrX 47848615 47848835 -118801461 + MIR SINE MIR 18 262 0 3 950 456 355 93 12 chrX 47849060 47849308 -118800988 - Tigger16b DNA Tigger -1 336 69 3 950 438 69 0 0 chrX 47849331 47849389 -118800907 + (TAA)n Simple_repeat Simple_repeat 3 60 0 3 950 355 297 102 0 chrX 47849394 47849522 -118800774 + B1F SINE Alu 2 142 -7 3 950 299 362 50 7 chrX 47850035 47850174 -118800122 + B1F SINE Alu 4 148 -1 3 950 607 199 1 0 chrX 47850303 47850419 -118799877 - B1_Mur3 SINE Alu -2 118 2 3 950 377 242 56 99 chrX 47850419 47850456 -118799840 - MT2B LTR ERVL -447 154 124 3 950 21 82 0 0 chrX 47850456 47850505 -118799791 + AT_rich Low_complexity Low_complexity 1 49 0 3 950 482 46 15 0 chrX 47850521 47850586 -118799710 + (GA)n Simple_repeat Simple_repeat 1 66 0 3 950 305 329 106 28 chrX 47850879 47851074 -118799222 + MER58B DNA MER1_type 6 214 -1 3 950 607 74 0 21 chrX 47851299 47851395 -118798901 + (TTCC)n Simple_repeat Simple_repeat 3 96 0 3 950 258 196 0 67 chrX 47853484 47853544 -118796752 + polypurine Low_complexity Low_complexity 5 60 0 3 950 180 111 0 0 chrX 47854466 47854493 -118795803 + (TGGA)n Simple_repeat Simple_repeat 4 30 0 3 950 189 398 40 55 chrX 47855700 47855953 -118794343 - L2c LINE L2 -206 3181 2933 3 950 194 359 32 49 chrX 47856026 47856149 -118794147 + L2a LINE L2 3291 3411 -15 3 950 224 372 146 26 chrX 47856179 47856529 -118793767 - L2c LINE L2 -544 2875 2484 3 950 1579 47 0 0 chrX 47856530 47856722 -118793574 + B2_Mm1a SINE B2 1 192 -1 3 950 225 250 0 0 chrX 47856860 47856920 -118793376 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 950 30 27 0 0 chrX 47857350 47857387 -118792909 + AT_rich Low_complexity Low_complexity 1 37 0 3 950 3217 190 65 25 chrX 47857887 47858655 -118791641 - Lx9 LINE L1 -19 7625 6827 3 950 394 303 86 36 chrX 47859198 47859616 -118790680 + L1MD LINE L1 3957 4395 -1751 3 950 375 321 23 15 chrX 47859633 47859766 -118790530 + RSINE1 SINE B4 3 136 -29 3 950 21128 21 0 0 chrX 47859858 47862451 -118787845 + L1Md_T LINE L1 2993 5586 -297 3 950 8032 56 0 0 chrX 47862451 47863446 -118786850 + L1Md_T LINE L1 5587 6581 -1 3 950 405 135 189 0 chrX 47863496 47863570 -118786726 - B2_Mm2 SINE B2 -67 128 41 3 950 2562 62 26 9 chrX 47863570 47863912 -118786384 + L1Md_F2 LINE L1 6233 6580 -2 3 950 212 148 48 32 chrX 47864007 47864070 -118786226 + (TATAA)n Simple_repeat Simple_repeat 1 64 0 3 950 797 232 34 44 chrX 47864154 47864432 -118785864 + L1MD LINE L1 4618 4889 -1257 3 950 453 35 0 0 chrX 47864428 47864486 -118785810 - L1Md_F2 LINE L1 -319 6263 6206 3 950 3358 129 4 11 chrX 47864486 47865250 -118785046 + L1Md_F LINE L1 530 1271 -4606 3 950 34761 33 5 11 chrX 47865264 47870677 -118779619 + L1Md_T LINE L1 207 5586 -297 3 950 8098 46 3 0 chrX 47870677 47871670 -118778626 + L1Md_T LINE L1 5587 6582 0 3 950 316 55 27 40 chrX 47871690 47871765 -118778531 + (CAAAAA)n Simple_repeat Simple_repeat 2 75 0 3 950 29651 78 2 3 chrX 47871765 47876062 -118774234 + L1Md_F2 LINE L1 1290 5585 -298 3 950 7572 72 3 1 chrX 47876063 47877052 -118773244 + L1Md_F2 LINE L1 5587 6577 -5 3 950 33 0 0 0 chrX 47877052 47877085 -118773211 + AT_rich Low_complexity Low_complexity 1 33 0 3 950 2574 157 39 21 chrX 47877085 47877553 -118772743 - RLTR33 LTR ERVK -201 477 2 3 950 557 341 54 0 chrX 47877708 47877966 -118772330 + Lx8 LINE L1 6842 7113 -360 3 950 19707 114 73 22 chrX 47877959 47879299 -118770997 + L1_Mus1 LINE L1 2178 3643 -2240 3 950 339 137 0 0 chrX 47879299 47879350 -118770946 + B1_Mus2 SINE Alu 76 126 -21 3 950 19707 114 73 22 chrX 47879350 47880343 -118769953 + L1_Mus1 LINE L1 3644 4731 -1152 3 950 273 29 0 0 chrX 47880343 47880377 -118769919 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 950 19707 105 41 11 chrX 47880377 47882201 -118768095 + L1_Mus1 LINE L1 4732 6567 0 3 950 4844 139 16 1 chrX 47882212 47882981 -118767315 + Lx LINE L1 5862 6641 -13 3 950 374 165 27 190 chrX 47883011 47883172 -118767124 + L1VL1 LINE L1 49 357 -6065 3 950 584 183 41 27 chrX 47883192 47883338 -118766958 + L1Md_F LINE L1 628 775 -5744 3 950 16369 106 2 7 chrX 47883351 47886669 -118763627 + L1Md_F LINE L1 414 3714 -2169 3 950 601 103 0 0 chrX 47886665 47886752 -118763544 - L1_Mm LINE L1 -935 4948 4862 3 950 3568 14 2 2 chrX 47886753 47887187 -118763109 + L1Md_A LINE L1 5153 5586 -297 3 950 8512 30 0 0 chrX 47887187 47888183 -118762113 + L1Md_A LINE L1 5587 6582 0 3 950 642 48 0 0 chrX 47888184 47888268 -118762028 - L1_Mm LINE L1 -1007 4876 4793 3 950 7682 29 4 12 chrX 47888268 47889184 -118761112 + L1Md_F3 LINE L1 5675 6583 -1 3 950 747 68 0 0 chrX 47889194 47889297 -118760999 - MusHAL1 LINE L1 -631 2081 1979 3 950 6370 109 2 0 chrX 47889292 47890221 -118760075 - MusHAL1 LINE L1 -916 1796 866 3 950 226 146 24 0 chrX 47890244 47890285 -118760011 + RMER2 LTR ERV1 524 565 -2 3 950 331 194 56 0 chrX 47890332 47890404 -118759892 + Lx4A LINE L1 6068 6143 -915 3 950 843 167 21 0 chrX 47890700 47890844 -118759452 - Lx2B LINE L1 -428 6572 6426 3 950 1119 126 27 112 chrX 47890844 47891104 -118759192 - RLTR22_Mur LTR ERVK 0 1848 1611 3 950 2030 138 35 0 chrX 47891216 47891563 -118758733 - L1_Mur1 LINE L1 -954 4932 4574 3 950 225 187 21 62 chrX 47891563 47891660 -118758636 + T-rich Low_complexity Low_complexity 1 93 0 3 950 17575 113 9 7 chrX 47891770 47895214 -118755082 - L1_Mus3 LINE L1 0 6638 3185 3 950 1361 107 246 0 chrX 47895210 47895454 -118754842 - MusHAL1 LINE L1 -1034 1678 1375 3 950 7813 91 1 5 chrX 47896015 47897075 -118753221 - L1_Mus4 LINE L1 -18 6618 5588 3 950 6046 88 37 32 chrX 47897078 47897761 -118752535 - L1_Mur1 LINE L1 -1019 4867 4188 3 950 236 0 88 0 chrX 47897761 47897795 -118752501 + (CATAT)n Simple_repeat Simple_repeat 2 38 0 3 950 6046 88 37 32 chrX 47897795 47898007 -118752289 - L1_Mur1 LINE L1 -1699 4187 3976 3 950 243 0 0 0 chrX 47898007 47898034 -118752262 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3 950 6046 88 37 32 chrX 47898034 47898075 -118752221 - L1_Mur1 LINE L1 -1911 3975 3927 3 950 13211 120 62 4 chrX 47898159 47900928 -118749368 - L1_Mur1 LINE L1 -2594 3292 15 3 950 968 145 0 18 chrX 47900936 47901105 -118749191 - RLTR22_Mus LTR ERVK -1642 166 1 4 950 3543 137 34 25 chrX 47901105 47901717 -118748579 - Lx2B LINE L1 -569 6431 5814 3 950 2046 153 40 62 chrX 47901712 47902115 -118748181 + Lx2B LINE L1 6603 6996 -4 3 950 1115 96 0 6 chrX 47902193 47902350 -118747946 - L1_Mur2 LINE L1 -933 4944 4789 4 950 490 209 82 0 chrX 47903162 47903272 -118747024 + Lx6 LINE L1 7255 7373 -87 4 950 3262 42 20 10 chrX 47903949 47904357 -118745939 - L1Md_F3 LINE L1 0 6584 6173 4 950 250 319 33 25 chrX 47904667 47904789 -118745507 - RSINE1 SINE B4 -7 158 36 4 950 1997 50 0 0 chrX 47904879 47905120 -118745176 + L1Md_A LINE L1 6342 6582 0 4 950 14336 99 40 1 chrX 47905224 47908188 -118742108 - L1_Mus1 LINE L1 0 6567 2482 4 950 1764 157 117 8 chrX 47908188 47908555 -118741741 - MTC LTR MaLR -13 408 2 4 950 364 300 24 40 chrX 47908632 47908757 -118741539 + B3A SINE B2 67 189 -9 4 950 552 68 0 0 chrX 47909421 47909494 -118740802 + (TA)n Simple_repeat Simple_repeat 1 73 0 4 950 524 162 49 42 chrX 47910089 47910231 -118740065 + URR1B DNA MER1_type 79 221 -4 4 950 1152 94 99 0 chrX 47910709 47910880 -118739416 - B2_Mm2 SINE B2 -7 188 1 4 950 2351 189 36 28 chrX 47911811 47912339 -118737957 - RMER5 LTR ERV1 0 534 3 4 950 985 116 7 26 chrX 47912363 47912514 -118737782 - B1_Mus1 SINE Alu 0 148 1 4 950 333 0 0 0 chrX 47912617 47912654 -118737642 + (TATG)n Simple_repeat Simple_repeat 2 38 0 4 950 668 273 20 0 chrX 47912662 47912812 -118737484 - B3 SINE B2 -59 157 5 4 950 342 303 50 0 chrX 47913920 47914019 -118736277 - PB1D7 SINE Alu -6 114 11 4 950 402 310 63 6 chrX 47915196 47915371 -118734925 - RMER5 LTR ERV1 0 534 350 4 950 493 257 34 14 chrX 47915806 47915952 -118734344 - B3A SINE B2 -48 150 2 4 950 218 208 0 0 chrX 47916977 47917025 -118733271 + A-rich Low_complexity Low_complexity 1 48 0 4 950 1064 183 137 77 chrX 47918423 47918736 -118731560 + IAPEY3_LTR LTR ERVK 1 332 0 4 950 1292 96 17 0 chrX 47920459 47920636 -118729660 - B2_Mm2 SINE B2 -12 183 4 4 950 2938 57 43 0 chrX 47924437 47924808 -118725488 + L1Md_T LINE L1 6196 6582 0 4 950 234 91 0 0 chrX 47927277 47927310 -118722986 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 950 879 120 53 0 chrX 47927657 47927790 -118722506 + B1_Mus1 SINE Alu 2 141 -7 4 950 326 49 32 32 chrX 47927798 47927861 -118722435 + (GGGAGA)n Simple_repeat Simple_repeat 2 64 0 4 950 462 271 77 41 chrX 47928121 47928317 -118721979 - B3 SINE B2 -9 207 5 4 950 3283 102 26 0 chrX 47932350 47932813 -118717483 + MT2C_Mm LTR ERVL 1 475 0 4 950 1034 106 0 0 chrX 47933292 47933433 -118716863 + B1_Mm SINE Alu 1 141 -6 4 950 243 226 67 0 chrX 47935172 47935262 -118715034 + B1F SINE Alu 38 138 -11 4 950 3185 88 75 0 chrX 47935883 47936325 -118713971 + MT2C_Mm LTR ERVL 1 475 0 4 950 1116 88 0 0 chrX 47936805 47936952 -118713344 + B1_Mm SINE Alu 1 147 0 4 950 32 0 0 0 chrX 47936952 47936984 -118713312 + AT_rich Low_complexity Low_complexity 1 32 0 4 950 375 23 0 0 chrX 47937537 47937581 -118712715 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 950 636 252 37 37 chrX 47938784 47938998 -118711298 - B3 SINE B2 0 216 3 4 950 237 296 40 19 chrX 47939052 47939159 -118711137 + PB1D10 SINE Alu 3 111 -38 4 950 654 154 0 77 chrX 47940345 47940500 -118709796 - URR1A DNA MER1_type 0 226 84 4 950 1163 75 0 0 chrX 47940500 47940647 -118709649 + B1_Mus1 SINE Alu 2 148 0 4 950 283 213 76 76 chrX 47941314 47941446 -118708850 - Lx7 LINE L1 -4 7692 7561 4 950 1004 44 88 7 chrX 47941447 47941584 -118708712 + B1_Mus1 SINE Alu 1 148 0 4 950 240 271 9 103 chrX 47941593 47941700 -118708596 + MT2B LTR ERVL 151 247 -354 4 950 392 233 18 1 chrX 47941618 47941708 -118708588 + B1_Mus1 SINE Alu 10 106 -14 4 950 198 0 0 0 chrX 47941708 47941730 -118708566 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 4 950 1157 50 0 0 chrX 47941789 47941929 -118708367 - B1_Mus1 SINE Alu -6 142 3 4 950 422 144 122 0 chrX 47941960 47942050 -118708246 + RMER6A LTR ERVK 1 101 -360 4 950 1623 165 74 16 chrX 47942043 47942407 -118707889 + RMER6A LTR ERVK 369 753 -3 4 950 1412 244 72 29 chrX 47942527 47942944 -118707352 - Lx7 LINE L1 -426 7270 6836 4 950 368 262 12 110 chrX 47943223 47943241 -118707055 + ID_B1 SINE B4 78 224 0 4 950 664 163 28 69 chrX 47943241 47943386 -118706910 + B1_Mur4 SINE Alu 12 150 0 4 950 231 189 0 0 chrX 47943386 47943439 -118706857 + A-rich Low_complexity Low_complexity 3 55 0 4 950 807 93 97 26 chrX 47944566 47944721 -118705575 + B2_Mm2 SINE B2 14 179 -16 4 950 396 176 226 27 chrX 47945521 47945667 -118704629 - ORR1C2 LTR MaLR 0 384 210 4 950 200 34 0 33 chrX 47946152 47946182 -118704114 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 950 249 33 0 0 chrX 47946828 47946858 -118703438 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 950 1552 256 34 48 chrX 47946914 47947452 -118702844 - Lx7 LINE L1 -334 7362 6833 4 950 223 243 28 28 chrX 47954526 47954598 -118695698 + B1F SINE Alu 73 144 -5 4 950 238 243 28 28 chrX 47957152 47957224 -118693072 + B1F SINE Alu 73 144 -5 4 950 214 257 28 28 chrX 47959789 47959861 -118690435 + B1F SINE Alu 73 144 -5 4 950 1411 288 40 24 chrX 47962372 47963172 -118687124 + Lx6 LINE L1 6118 6896 -564 4 950 255 173 0 0 chrX 47963201 47963253 -118687043 + CT-rich Low_complexity Low_complexity 2 53 0 4 950 2934 162 59 14 chrX 47963415 47964004 -118686292 + Lx7 LINE L1 5262 5866 -1830 4 950 862 84 114 0 chrX 47964004 47964135 -118686161 - B1_Mus1 SINE Alu 0 148 3 4 950 1609 210 362 43 chrX 47964135 47964543 -118685753 + Lx7 LINE L1 5867 6404 -1292 4 950 364 118 54 81 chrX 47964639 47964713 -118685583 + Lx6 LINE L1 6586 6657 -803 4 950 215 257 28 28 chrX 47969142 47969214 -118681082 + B1F SINE Alu 73 144 -5 4 950 417 20 0 0 chrX 47971198 47971248 -118679048 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 950 1007 111 14 0 chrX 47971912 47972056 -118678240 + B1_Mus1 SINE Alu 1 146 -2 4 951 226 333 0 0 chrX 47972536 47972608 -118677688 + B1_Mur4 SINE Alu 71 142 -8 4 951 359 274 19 13 chrX 47972708 47972863 -118677433 + (TA)n Simple_repeat Simple_repeat 2 157 0 4 951 308 294 9 28 chrX 47974137 47974245 -118676051 - PB1D9 SINE Alu -6 114 9 4 951 234 218 0 18 chrX 47974355 47974411 -118675885 + A-rich Low_complexity Low_complexity 2 56 0 4 951 1080 73 0 0 chrX 47974764 47974900 -118675396 + B1_Mm SINE Alu 2 137 -10 4 951 252 0 0 0 chrX 47974900 47974928 -118675368 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 4 951 24 32 0 0 chrX 47975110 47975141 -118675155 + AT_rich Low_complexity Low_complexity 1 31 0 4 951 1676 26 0 10 chrX 47975960 47976154 -118674142 - B2_Mm1a SINE B2 0 193 2 4 951 231 36 0 0 chrX 47976693 47976721 -118673575 + (A)n Simple_repeat Simple_repeat 1 28 0 4 951 28 29 0 0 chrX 47976732 47976767 -118673529 + AT_rich Low_complexity Low_complexity 1 35 0 4 951 496 183 59 34 chrX 47976773 47976892 -118673404 + B1_Mur4 SINE Alu 18 139 -11 4 951 340 235 22 14 chrX 47977092 47977230 -118673066 + GA-rich Low_complexity Low_complexity 2 140 0 4 951 489 144 0 0 chrX 47977545 47977635 -118672661 + (T)n Simple_repeat Simple_repeat 1 90 0 4 951 1206 41 0 39 chrX 47977635 47977788 -118672508 - B1_Mm SINE Alu 0 147 1 4 951 861 153 7 27 chrX 47977793 47977941 -118672355 - B1_Mur3 SINE Alu 0 149 5 4 951 625 283 195 13 chrX 47977989 47978369 -118671927 + RMER5 LTR ERV1 86 534 0 4 951 380 254 35 17 chrX 47978691 47978807 -118671489 + B1F SINE Alu 1 118 -31 4 951 258 105 0 0 chrX 47979183 47979221 -118671075 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 951 499 179 27 36 chrX 47979396 47979506 -118670790 - PB1D9 SINE Alu -10 110 2 4 951 298 217 57 14 chrX 47980049 47980119 -118670177 - ID_B1 SINE B4 -12 212 140 4 951 969 200 37 47 chrX 47980327 47980542 -118669754 - B3 SINE B2 -3 213 1 4 951 247 253 12 24 chrX 47980565 47980650 -118669646 + (CAAA)n Simple_repeat Simple_repeat 3 86 0 4 951 212 300 33 0 chrX 47981075 47981135 -118669161 + B1F1 SINE Alu 45 106 -43 4 951 827 246 19 24 chrX 47981408 47981616 -118668680 + B3 SINE B2 1 207 -9 4 951 4492 183 100 26 chrX 47981886 47982273 -118668023 - RMER12 LTR ERVK -127 1195 769 4 951 204 67 0 0 chrX 47982273 47982303 -118667993 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 4 951 4492 183 100 26 chrX 47982303 47982329 -118667967 - RMER12 LTR ERVK -554 768 738 4 951 411 38 0 0 chrX 47982329 47982382 -118667914 + (CACAG)n Simple_repeat Simple_repeat 1 53 0 4 951 4492 183 100 26 chrX 47982382 47983079 -118667217 - RMER12 LTR ERVK -585 737 3 4 951 1263 160 18 27 chrX 47984636 47984861 -118665435 + URR1B DNA MER1_type 1 223 -2 4 951 180 0 0 0 chrX 47986394 47986414 -118663882 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 951 690 137 127 16 chrX 47986704 47986830 -118663466 + B1_Mur4 SINE Alu 1 140 -10 4 951 1201 95 22 0 chrX 47986935 47987114 -118663182 + B2_Mm2 SINE B2 8 190 -5 4 951 386 278 26 9 chrX 47989825 47989941 -118660355 - B1F1 SINE Alu -29 120 3 4 951 436 273 43 109 chrX 47989980 47990190 -118660106 - B3A SINE B2 0 198 3 4 951 24 0 0 0 chrX 47990235 47990259 -118660037 + AT_rich Low_complexity Low_complexity 1 24 0 4 951 689 261 101 5 chrX 47990276 47990435 -118659861 + B3 SINE B2 4 180 -36 4 951 339 25 0 0 chrX 47990435 47990475 -118659821 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 951 689 261 101 5 chrX 47990475 47990504 -118659792 + B3 SINE B2 181 210 -6 4 951 23 54 0 0 chrX 47990505 47990542 -118659754 + AT_rich Low_complexity Low_complexity 1 37 0 5 951 221 284 75 0 chrX 47990549 47990616 -118659680 + B1_Mus1 SINE Alu 9 80 -68 5 951 2170 142 21 29 chrX 47990626 47990976 -118659320 + ORR1B1 LTR MaLR 6 361 -33 5 951 1084 90 157 0 chrX 47990976 47991142 -118659154 - B2_Mm2 SINE B2 -2 193 2 5 951 2170 142 21 29 chrX 47991142 47991175 -118659121 + ORR1B1 LTR MaLR 362 386 -8 5 951 1400 97 16 0 chrX 47991248 47991434 -118658862 + B2_Mm2 SINE B2 2 190 -5 5 951 300 232 35 58 chrX 47991623 47991710 -118658586 - B1F SINE Alu -17 132 48 5 951 1064 80 153 0 chrX 47992102 47992265 -118658031 + B2_Mm2 SINE B2 2 189 -6 5 951 245 306 0 0 chrX 47992999 47993061 -118657235 + ID SINE ID 15 76 -148 5 951 280 267 0 0 chrX 47993006 47993066 -118657230 + ID4 SINE ID 21 80 -3 5 951 333 0 0 0 chrX 47993195 47993232 -118657064 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 951 216 0 0 0 chrX 47993232 47993255 -118657041 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 951 956 150 0 26 chrX 47993340 47993491 -118656805 - B1_Mur3 SINE Alu 0 149 3 5 951 243 260 104 0 chrX 47993492 47993569 -118656727 - Lx8 LINE L1 -2 7471 7387 5 951 1257 237 119 28 chrX 47993580 47993940 -118656356 - Lx8 LINE L1 -144 7329 6937 5 951 778 265 48 44 chrX 47994083 47994398 -118655898 - L1_Rod LINE L1 -349 5825 5434 5 951 321 245 65 19 chrX 47994991 47995099 -118655197 - PB1D7 SINE Alu -6 114 2 5 951 1251 106 39 0 chrX 47995174 47995353 -118654943 + B2_Mm2 SINE B2 2 187 -8 5 951 279 54 0 0 chrX 47995436 47995473 -118654823 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 951 5649 168 28 38 chrX 47995557 47996626 -118653670 - Lx5 LINE L1 0 7050 5993 5 951 1972 130 16 13 chrX 47996636 47996940 -118653356 - Lx4A LINE L1 0 7058 6754 5 951 4429 118 36 44 chrX 47996943 47997238 -118653058 - L1_Mur2 LINE L1 -2836 3041 2741 5 951 879 90 60 0 chrX 47997238 47997372 -118652924 + B1_Mus1 SINE Alu 2 143 -5 5 951 4429 118 36 44 chrX 47997372 47997848 -118652448 - L1_Mur2 LINE L1 -3137 2740 2276 5 951 1023 142 0 0 chrX 47998004 47998159 -118652137 - Lx9 LINE L1 -731 6913 6759 5 951 1515 58 16 0 chrX 47998179 47998369 -118651927 - B2_Mm1t SINE B2 0 193 1 5 951 575 188 45 0 chrX 47998559 47998671 -118651625 - Lx9 LINE L1 -871 6773 6657 5 951 1137 241 92 65 chrX 47998676 47999227 -118651069 - Lx9 LINE L1 -1105 6539 5856 5 951 210 328 0 76 chrX 47999317 47999383 -118650913 + RSINE1 SINE B4 83 143 -22 5 951 405 0 0 0 chrX 47999387 47999432 -118650864 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 951 273 119 0 0 chrX 47999448 47999490 -118650806 + (TAA)n Simple_repeat Simple_repeat 1 42 0 5 951 565 314 38 5 chrX 47999512 47999698 -118650598 + B3A SINE B2 5 196 -2 5 951 264 30 0 0 chrX 47999760 47999793 -118650503 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 951 413 301 88 0 chrX 48000002 48000115 -118650181 + RSINE1 SINE B4 41 163 -2 1 951 23 54 0 0 chrX 48000296 48000333 -118649963 + AT_rich Low_complexity Low_complexity 1 37 0 2 951 207 0 0 0 chrX 48000413 48000436 -118649860 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 951 421 17 35 0 chrX 48000520 48000578 -118649718 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 951 375 297 17 0 chrX 48000585 48000703 -118649593 - Lx7 LINE L1 -388 7308 7189 5 951 234 0 0 0 chrX 48000744 48000770 -118649526 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 951 571 253 20 7 chrX 48000772 48000919 -118649377 - B1_Mur4 SINE Alu 0 150 2 7 951 4453 180 86 13 chrX 48000952 48001875 -118648421 - Lx6 LINE L1 -176 7284 6295 8 951 1156 204 4 13 chrX 48001889 48002117 -118648179 + URR1A DNA MER1_type 1 226 0 9 951 13541 101 1 2 chrX 48002126 48004177 -118646119 + L1_Mm LINE L1 2897 4946 -937 1 951 207 0 0 0 chrX 48004199 48004222 -118646074 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1 951 4391 86 8 2 chrX 48004228 48004449 -118645847 - L1Md_F2 LINE L1 -10 6572 6353 1 951 204 40 0 0 chrX 48004449 48004474 -118645822 + (TGGGGG)n Simple_repeat Simple_repeat 3 27 0 1 951 4391 86 8 2 chrX 48004474 48004858 -118645438 - L1Md_F2 LINE L1 -230 6352 5964 1 951 21 0 0 0 chrX 48004862 48004883 -118645413 + AT_rich Low_complexity Low_complexity 1 21 0 1 951 15920 64 7 1 chrX 48004901 48007858 -118642438 - L1Md_T LINE L1 0 6582 3608 1 951 1954 48 32 0 chrX 48007866 48008116 -118642180 + L1_Mus2 LINE L1 6309 6566 0 1 951 805 287 71 36 chrX 48008147 48008400 -118641896 + B4 SINE B4 5 266 -26 1 951 281 235 0 12 chrX 48008482 48008568 -118641728 + (CA)n Simple_repeat Simple_repeat 2 86 0 1 951 588 29 0 0 chrX 48008569 48008639 -118641657 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 951 182 333 107 0 chrX 48008639 48008714 -118641582 - MER5B DNA MER1_type -63 115 33 2 951 1010 118 0 6 chrX 48008819 48008981 -118641315 + (TTTC)n Simple_repeat Simple_repeat 2 162 0 2 951 650 228 0 0 chrX 48009290 48009417 -118640879 + B1_Mus2 SINE Alu 2 128 -19 2 951 471 18 0 0 chrX 48009421 48009477 -118640819 + (CAAGA)n Simple_repeat Simple_repeat 3 58 0 2 951 2416 93 9 0 chrX 48010095 48010417 -118639879 + ORR1A2 LTR MaLR 3 327 0 2 951 321 360 0 8 chrX 48011620 48011746 -118638550 + MIR SINE MIR 73 197 -65 2 951 441 0 0 0 chrX 48011769 48011818 -118638478 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 951 642 272 86 0 chrX 48011944 48012106 -118638190 - B3 SINE B2 -1 215 40 2 951 868 309 41 26 chrX 48012147 48012585 -118637711 - Lx7 LINE L1 0 7473 7012 2 951 389 315 18 18 chrX 48012587 48012700 -118637596 + RMER15 LTR ERVL 325 437 -138 2 951 340 282 0 12 chrX 48012889 48012975 -118637321 - ORR1E LTR MaLR -266 93 9 3 951 394 267 160 59 chrX 48013009 48013598 -118636698 + L1MEc LINE L1 538 1185 -5215 3 951 300 280 85 31 chrX 48013658 48013787 -118636509 + L1MEc LINE L1 1299 1434 -4966 3 951 4323 165 24 101 chrX 48013989 48014671 -118635625 - L1_Mur2 LINE L1 -1255 4622 3927 3 951 4244 114 51 11 chrX 48014671 48015335 -118634961 - Lx2A1 LINE L1 -2 7006 6316 3 951 4323 165 24 101 chrX 48015335 48015699 -118634597 - L1_Mur2 LINE L1 -1951 3926 3657 3 951 4712 182 44 108 chrX 48015696 48015730 -118634566 + Lx6 LINE L1 4592 4624 -1256 3 951 222 37 0 0 chrX 48015730 48015757 -118634539 + (CAA)n Simple_repeat Simple_repeat 2 28 0 3 951 4712 182 44 108 chrX 48015757 48016335 -118633961 + Lx6 LINE L1 4625 5225 -655 3 951 801 82 0 0 chrX 48016335 48016445 -118633851 + (CA)n Simple_repeat Simple_repeat 1 110 0 3 951 6415 216 57 47 chrX 48016445 48018633 -118631663 + Lx6 LINE L1 5226 7382 -78 3 951 782 214 0 0 chrX 48018733 48018878 -118631418 - B1_Mur2 SINE Alu -2 147 3 3 951 325 292 31 43 chrX 48018905 48019066 -118631230 + L1MEc LINE L1 2095 2253 -4147 3 951 30579 81 17 1 chrX 48019070 48024203 -118626093 + L1Md_F2 LINE L1 366 5586 -297 3 951 7564 67 5 4 chrX 48024203 48025197 -118625099 + L1Md_F2 LINE L1 5587 6581 -1 3 951 406 229 66 7 chrX 48025270 48025437 -118624859 - L1M1 LINE L1 -672 5625 5447 3 951 3059 199 102 28 chrX 48025493 48026347 -118623949 + Lx2B LINE L1 6079 6995 -5 4 951 716 224 117 6 chrX 48026363 48026543 -118623753 - B3 SINE B2 -14 202 3 4 951 522 296 144 25 chrX 48026605 48026679 -118623617 - L1_Mur3 LINE L1 -559 5321 5237 4 951 498 17 0 0 chrX 48026679 48026738 -118623558 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 951 252 0 0 0 chrX 48026738 48026765 -118623531 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 951 522 296 144 25 chrX 48026765 48027050 -118623246 - L1_Mur3 LINE L1 -644 5236 4919 4 951 21 57 0 0 chrX 48027126 48027161 -118623135 + AT_rich Low_complexity Low_complexity 1 35 0 4 951 323 300 32 32 chrX 48027204 48027328 -118622968 + L1MEc LINE L1 2410 2533 -3786 3 951 343 263 48 12 chrX 48027528 48027720 -118622576 + L1MEc LINE L1 2780 2980 -3339 3 951 395 301 144 28 chrX 48027983 48028198 -118622098 + L1MC4 LINE L1 109 348 -5867 4 951 466 355 63 33 chrX 48028389 48028753 -118621543 + L1MC4 LINE L1 345 719 -5496 4 951 189 0 0 0 chrX 48028969 48028990 -118621306 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 951 363 181 14 0 chrX 48028990 48029063 -118621233 - B2_Mm2 SINE B2 -93 123 47 4 951 1215 107 6 11 chrX 48029129 48029309 -118620987 - B2_Mm2 SINE B2 -14 181 3 4 951 593 243 88 7 chrX 48029312 48029449 -118620847 - B1F SINE Alu 0 149 2 5 951 945 313 105 30 chrX 48029802 48030691 -118619605 + L1MC4 LINE L1 6628 7582 -460 5 951 226 244 0 0 chrX 48030716 48030757 -118619539 + B1_Mur1 SINE Alu 76 116 -33 5 951 282 87 0 0 chrX 48030774 48030820 -118619476 + (CAAG)n Simple_repeat Simple_repeat 2 47 0 5 951 326 296 88 82 chrX 48030912 48031229 -118619067 + L1MC4 LINE L1 7693 8011 -31 5 951 231 213 51 41 chrX 48031263 48031361 -118618935 - Lx8 LINE L1 -22 7451 7353 5 951 396 0 0 0 chrX 48031435 48031479 -118618817 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 951 8936 95 11 4 chrX 48031541 48033001 -118617295 + Lx3A LINE L1 5506 6975 -6 5 951 594 293 25 12 chrX 48033044 48033286 -118617010 - Lx7 LINE L1 -428 7268 7024 5 951 339 287 35 91 chrX 48033425 48033624 -118616672 + L1MC4 LINE L1 7258 7445 -597 5 951 210 338 0 27 chrX 48033945 48034018 -118616278 - PB1 SINE Alu 0 127 57 5 951 1114 102 0 56 chrX 48034020 48034217 -118616079 + L1_Mus3 LINE L1 6452 6637 -1 6 951 1514 52 0 0 chrX 48034235 48034428 -118615868 + L1Md_F3 LINE L1 5394 5586 -297 6 951 8243 27 26 0 chrX 48034428 48035401 -118614895 + L1Md_F3 LINE L1 5587 6584 0 6 951 214 317 0 0 chrX 48035418 48035478 -118614818 - PB1 SINE Alu -67 60 1 5 951 1019 71 0 7 chrX 48036371 48036513 -118613783 + (GAAA)n Simple_repeat Simple_repeat 2 142 0 6 951 929 226 80 5 chrX 48036633 48036833 -118613463 + B3 SINE B2 2 216 0 6 951 666 259 35 11 chrX 48037457 48037609 -118612687 - ID_B1 SINE B4 -1 223 77 6 951 880 324 143 50 chrX 48037959 48038398 -118611898 - MLT2B1 LTR ERVL -40 480 1 6 951 265 319 31 70 chrX 48038452 48038580 -118611716 + MTEa LTR MaLR 1 123 -256 6 951 284 284 51 76 chrX 48038600 48038745 -118611551 + ORR1C2 LTR MaLR 45 178 -189 6 951 236 203 78 0 chrX 48038881 48038945 -118611351 - L1M2 LINE L1 -3330 2813 2745 6 951 21 57 0 0 chrX 48039052 48039087 -118611209 + AT_rich Low_complexity Low_complexity 1 35 0 6 951 25 51 0 0 chrX 48039220 48039259 -118611037 + AT_rich Low_complexity Low_complexity 1 39 0 7 951 457 68 14 0 chrX 48039266 48039340 -118610956 - L1Md_F2 LINE L1 -3 6579 6505 7 951 4843 164 48 33 chrX 48039431 48040308 -118609988 + RMER19B LTR ERVK 1 890 -12 7 951 642 246 41 33 chrX 48040330 48040574 -118609722 - ERVL-int LTR ERVL -89 5668 5423 7 951 1097 85 0 0 chrX 48040673 48040814 -118609482 + B1_Mm SINE Alu 1 141 -6 7 951 302 333 44 58 chrX 48041563 48041700 -118608596 + B1F2 SINE Alu 1 135 -14 7 951 980 270 0 14 chrX 48041726 48041940 -118608356 + B3 SINE B2 6 216 0 7 951 441 169 13 0 chrX 48041966 48042043 -118608253 + Lx8 LINE L1 6718 6795 -678 7 951 21 0 0 0 chrX 48042080 48042101 -118608195 + AT_rich Low_complexity Low_complexity 1 21 0 7 951 1063 286 145 13 chrX 48042115 48042639 -118607657 - Lx8 LINE L1 -30 7443 6851 7 951 1177 255 147 37 chrX 48042641 48043178 -118607118 + Lx8 LINE L1 6876 7471 -2 7 951 23 33 0 0 chrX 48043782 48043812 -118606484 + AT_rich Low_complexity Low_complexity 1 30 0 8 951 1547 276 181 42 chrX 48044406 48045450 -118604846 + Lx9 LINE L1 6426 7615 -29 8 951 2501 154 46 19 chrX 48045472 48046041 -118604255 - L1_Rod LINE L1 -2935 2912 2329 8 951 2891 228 36 42 chrX 48046057 48047510 -118602786 - Lx6 LINE L1 -201 6849 5467 8 951 1774 190 26 12 chrX 48047479 48047894 -118602402 - Lx6 LINE L1 -850 5030 4610 8 951 413 222 11 0 chrX 48047888 48047978 -118602318 + L1_Mur3 LINE L1 4729 4819 -1061 8 951 817 261 19 14 chrX 48048055 48048269 -118602027 + B3 SINE B2 2 216 0 8 951 1082 312 63 33 chrX 48048348 48048713 -118601583 + MTEa LTR MaLR 4 379 0 8 951 1448 214 122 80 chrX 48048853 48048950 -118601346 + MTD LTR MaLR 1 97 -322 8 951 2522 138 10 0 chrX 48048950 48049342 -118600954 + Lx4A LINE L1 6661 7056 -2 8 951 1448 214 122 80 chrX 48049342 48049646 -118600650 + MTD LTR MaLR 98 419 0 8 951 317 252 91 0 chrX 48049658 48049757 -118600539 + L1MA4 LINE L1 5805 5912 -388 8 951 1510 287 24 18 chrX 48050091 48050598 -118599698 + Lx8 LINE L1 6389 6898 -575 9 951 1140 243 29 38 chrX 48050598 48050944 -118599352 + RLTR15 LTR ERVK 1 343 -16 9 951 1155 272 52 66 chrX 48050951 48051541 -118598755 + Lx8 LINE L1 6890 7471 -2 9 951 243 323 30 0 chrX 48051922 48052055 -118598241 + L1MD LINE L1 5036 5172 -974 9 951 721 329 31 23 chrX 48052191 48052580 -118597716 + L1M5 LINE L1 5319 5710 -469 9 951 298 288 88 7 chrX 48053918 48054065 -118596231 + L1M5 LINE L1 5703 5861 -318 9 951 601 278 125 61 chrX 48054249 48054544 -118595752 - ORR1E LTR MaLR -45 314 1 9 951 530 328 14 21 chrX 48055301 48055441 -118594855 + RSINE1 SINE B4 27 165 0 9 951 564 329 55 78 chrX 48055859 48056258 -118594038 - MT2A LTR ERVL -71 462 73 9 951 689 255 115 18 chrX 48056356 48056612 -118593684 + MTD LTR MaLR 99 379 0 9 951 571 178 206 10 chrX 48056859 48056978 -118593318 - Lx9 LINE L1 -25 7619 7480 9 951 270 0 0 0 chrX 48056978 48057008 -118593288 + (TG)n Simple_repeat Simple_repeat 2 31 0 9 951 571 178 206 10 chrX 48057008 48057087 -118593209 - Lx9 LINE L1 -165 7479 7383 9 951 8614 3 0 0 chrX 48057091 48058368 -118591928 - L1Md_A LINE L1 0 6582 5306 1 951 661 191 59 0 chrX 48058368 48058504 -118591792 - Lx9 LINE L1 -250 7394 7251 9 951 686 189 45 0 chrX 48060036 48060168 -118590128 - ORR1D1 LTR MaLR 0 374 237 1 951 518 176 8 0 chrX 48060168 48060287 -118590009 + (CA)n Simple_repeat Simple_repeat 1 120 0 1 951 308 54 0 0 chrX 48060288 48060325 -118589971 + HAL1-3A_ME LINE L1 1976 2012 -846 1 951 35 24 0 0 chrX 48060501 48060543 -118589753 + AT_rich Low_complexity Low_complexity 1 42 0 1 951 12948 95 19 36 chrX 48060554 48063570 -118586726 - L1VL2 LINE L1 -632 2983 32 1 951 3318 92 0 22 chrX 48063576 48064073 -118586223 + L1Md_F2 LINE L1 6074 6559 -23 1 951 506 250 175 6 chrX 48064129 48064306 -118585990 + B3 SINE B2 2 208 -8 1 951 961 276 86 21 chrX 48064348 48064977 -118585319 + L1MD LINE L1 2677 3346 -2800 1 951 1202 120 0 35 chrX 48065181 48065209 -118585087 - B2_Mm2 SINE B2 -2 193 167 1 951 1144 95 0 0 chrX 48065209 48065357 -118584939 - B1_Mus1 SINE Alu 0 148 1 1 951 216 0 0 0 chrX 48065365 48065389 -118584907 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 951 1202 120 0 35 chrX 48065389 48065550 -118584746 - B2_Mm2 SINE B2 -33 162 2 1 951 1362 262 144 21 chrX 48065566 48066279 -118584017 + L1MD LINE L1 3457 4257 -1889 1 951 840 227 42 21 chrX 48066285 48066474 -118583822 + B3A SINE B2 6 198 0 1 951 272 324 14 0 chrX 48066604 48066678 -118583618 + RSINE1 SINE B4 6 80 -85 1 951 601 280 99 21 chrX 48066747 48067130 -118583166 + L1MD LINE L1 4402 4814 -1332 1 951 216 135 0 0 chrX 48067138 48067175 -118583121 + (CAGGA)n Simple_repeat Simple_repeat 5 41 0 1 951 226 286 6 93 chrX 48067304 48067466 -118582830 - L1P5 LINE L1 -646 5510 5363 1 951 449 316 71 55 chrX 48067480 48067805 -118582491 - L1M2 LINE L1 -813 5330 5001 1 951 598 280 0 58 chrX 48068238 48068409 -118581887 + RSINE1 SINE B4 5 165 0 1 951 415 290 72 7 chrX 48069906 48070045 -118580251 - MLT1A1 LTR MaLR 0 408 261 1 951 236 287 65 65 chrX 48070196 48070289 -118580007 - MLT1A1 LTR MaLR -240 168 76 1 951 1466 193 77 16 chrX 48070661 48071016 -118579280 + MTD LTR MaLR 28 404 -17 1 951 3674 225 82 79 chrX 48071018 48072073 -118578223 + MTD-int LTR MaLR 1 1058 -200 1 951 3723 180 29 25 chrX 48072084 48072200 -118578096 - RMER1A Other Other -1 1029 912 1 951 414 0 0 0 chrX 48072200 48072246 -118578050 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 951 270 0 0 0 chrX 48072247 48072277 -118578019 + (CCA)n Simple_repeat Simple_repeat 1 30 0 1 951 3723 211 31 34 chrX 48072277 48073253 -118577043 - RMER1A Other Other -119 911 69 1 951 730 168 92 6 chrX 48073394 48073568 -118576728 + MTD-int LTR MaLR 1070 1258 0 1 951 1802 230 19 3 chrX 48073568 48073943 -118576353 + MTD LTR MaLR 1 381 -38 1 951 394 266 98 60 chrX 48073942 48074126 -118576170 + RMER15 LTR ERVL 342 532 -43 1 951 1408 233 43 22 chrX 48074149 48074637 -118575659 + L1MA9 LINE L1 4447 4944 -1199 1 951 4611 179 79 38 chrX 48074665 48075668 -118574628 + RMER1B Other Other 8 1051 -15 1 951 251 54 27 0 chrX 48075772 48075809 -118574487 + (TTA)n Simple_repeat Simple_repeat 1 38 0 1 951 670 232 134 11 chrX 48075865 48076052 -118574244 + B3 SINE B2 7 216 0 1 951 1292 267 29 3 chrX 48076479 48076987 -118573309 + L1MA9 LINE L1 5210 5736 -564 1 951 592 233 178 0 chrX 48076991 48077171 -118573125 + B3 SINE B2 2 213 -3 1 951 559 275 46 5 chrX 48077303 48077497 -118572799 + L1MA9 LINE L1 5906 6107 -205 1 951 471 312 9 0 chrX 48077500 48077609 -118572687 + ID_B1 SINE B4 84 193 -31 1 951 217 422 44 0 chrX 48077609 48077634 -118572662 + B1_Mus1 SINE Alu 3 142 -6 1 951 576 130 0 0 chrX 48077828 48077920 -118572376 + (TA)n Simple_repeat Simple_repeat 1 92 0 1 951 201 121 0 0 chrX 48077958 48077991 -118572305 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 951 461 300 50 0 chrX 48077995 48078135 -118572161 - B1_Mur1 SINE Alu -2 147 1 1 951 560 213 43 14 chrX 48078143 48078281 -118572015 - RMER1C Other Other -1 1341 1200 1 951 221 221 0 14 chrX 48078281 48078350 -118571946 + GA-rich Low_complexity Low_complexity 2 69 0 1 951 416 171 0 13 chrX 48078352 48078429 -118571867 - RMER1C Other Other -150 1192 1117 1 951 1215 48 0 0 chrX 48078433 48078579 -118571717 + B1_Mus1 SINE Alu 2 147 -1 1 951 201 162 0 0 chrX 48078580 48078617 -118571679 + A-rich Low_complexity Low_complexity 1 37 0 1 951 573 55 0 0 chrX 48078618 48078691 -118571605 + (GGAA)n Simple_repeat Simple_repeat 4 76 0 1 951 536 304 35 46 chrX 48080206 48080281 -118570015 - L1MB7 LINE L1 -2 6182 6101 1 951 324 0 0 0 chrX 48080281 48080317 -118569979 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1 951 536 304 35 46 chrX 48080317 48080613 -118569683 - L1MB7 LINE L1 -84 6100 5815 1 951 275 49 24 0 chrX 48080788 48080829 -118569467 + (TTTAA)n Simple_repeat Simple_repeat 5 46 0 1 951 747 249 5 38 chrX 48080859 48081043 -118569253 + B3A SINE B2 4 181 -17 1 951 519 45 0 0 chrX 48081109 48081175 -118569121 + (GGAGAA)n Simple_repeat Simple_repeat 1 66 0 1 951 1098 97 6 11 chrX 48081175 48081352 -118568944 + (AGGGGG)n Simple_repeat Simple_repeat 5 180 0 1 951 217 163 20 0 chrX 48081363 48081412 -118568884 + (CAG)n Simple_repeat Simple_repeat 3 52 0 1 951 684 36 0 0 chrX 48081412 48081495 -118568801 + (GGA)n Simple_repeat Simple_repeat 3 85 0 1 951 186 125 41 20 chrX 48082208 48082257 -118568039 + CT-rich Low_complexity Low_complexity 4 53 0 1 951 320 258 204 0 chrX 48082264 48082357 -118567939 - B4A SINE B4 -97 195 84 1 951 1305 159 28 0 chrX 48082438 48082652 -118567644 - URR1A DNA MER1_type -5 221 2 1 951 322 57 0 36 chrX 48082655 48082710 -118567586 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 1 951 1180 55 0 14 chrX 48082714 48082862 -118567434 - B1_Mus1 SINE Alu 0 148 3 1 951 1306 236 81 21 chrX 48083014 48083367 -118566929 - MTE2a LTR MaLR -4 417 1 1 951 417 271 9 0 chrX 48083902 48084009 -118566287 + PB1D10 SINE Alu 4 111 -6 1 951 474 294 17 91 chrX 48084635 48084811 -118565485 - RSINE1 SINE B4 0 165 3 1 951 870 264 9 14 chrX 48086013 48086228 -118564068 + B3 SINE B2 1 214 -2 1 951 872 309 56 45 chrX 48086308 48086596 -118563700 - B4A SINE B4 0 292 2 1 951 525 293 63 6 chrX 48086748 48086923 -118563373 - MER3 DNA MER1_type -8 201 17 1 951 180 0 0 0 chrX 48086926 48086946 -118563350 + (TCTG)n Simple_repeat Simple_repeat 2 21 0 1 951 231 170 43 0 chrX 48086948 48086995 -118563301 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 1 951 566 207 118 30 chrX 48087518 48087687 -118562609 + Lx9 LINE L1 7282 7465 -179 1 951 246 62 0 0 chrX 48087690 48087722 -118562574 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 951 440 135 9 43 chrX 48087737 48087853 -118562443 + Lx9 LINE L1 7530 7641 -3 1 951 377 226 35 12 chrX 48087918 48088003 -118562293 + MTD LTR MaLR 256 342 -77 1 951 1425 43 0 0 chrX 48088004 48088190 -118562106 - L1_Mus1 LINE L1 -487 6080 5895 1 951 1206 21 0 0 chrX 48088186 48088331 -118561965 - L1_Mus1 LINE L1 -887 5749 5605 1 951 465 324 29 0 chrX 48088336 48088472 -118561824 - B1F1 SINE Alu -2 147 8 1 951 821 271 49 5 chrX 48088489 48088693 -118561603 - ID_B1 SINE B4 0 224 12 1 951 243 351 78 0 chrX 48088700 48088777 -118561519 - ID4_ SINE ID 0 83 1 1 951 229 316 87 92 chrX 48088793 48088864 -118561432 - B2_Mm2 SINE B2 0 195 2 1 951 621 246 16 16 chrX 48088864 48088988 -118561308 - RSINE1 SINE B4 -39 126 3 1 951 208 208 0 38 chrX 48089622 48089656 -118560640 + polypyrimidine Low_complexity Low_complexity 45 78 0 1 951 1112 92 6 0 chrX 48089656 48089819 -118560477 + (TTTTC)n Simple_repeat Simple_repeat 5 168 0 1 951 208 208 0 38 chrX 48089819 48089864 -118560432 + polypyrimidine Low_complexity Low_complexity 3 44 0 1 951 26 50 0 0 chrX 48089968 48090008 -118560288 + AT_rich Low_complexity Low_complexity 1 40 0 1 951 437 274 211 39 chrX 48090030 48090414 -118559882 - Zaphod2 DNA Tip100 -371 3153 2704 1 951 13359 78 37 11 chrX 48090487 48091792 -118558504 - L1Md_F2 LINE L1 -13 6569 5293 1 951 1181 42 0 14 chrX 48091792 48091938 -118558358 - B1_Mus2 SINE Alu -2 145 2 1 951 13359 75 78 19 chrX 48091938 48093385 -118556911 - L1Md_F2 LINE L1 -591 5292 3699 1 951 6625 81 12 28 chrX 48093382 48095295 -118555001 - L1Md_F2 LINE L1 -3611 2272 392 1 951 2563 56 0 0 chrX 48095297 48095638 -118554658 - L1_Mus1 LINE L1 -613 5954 5614 1 951 587 279 50 14 chrX 48095648 48095928 -118554368 - Zaphod2 DNA Tip100 -870 2654 2365 1 951 1332 301 102 2 chrX 48096809 48097282 -118553014 + RCHARR1 DNA MER1_type 1 520 -454 1 951 231 61 0 0 chrX 48097399 48097432 -118552864 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 951 2149 270 34 40 chrX 48097450 48099005 -118551291 - Lx9 LINE L1 -694 6950 5281 1 951 1031 231 137 32 chrX 48098999 48099460 -118550836 + Lx9 LINE L1 4716 5224 -623 1 951 1191 215 64 23 chrX 48099497 48099840 -118550456 + RCHARR1 DNA MER1_type 507 863 -111 1 951 358 111 14 21 chrX 48099820 48099950 -118550346 - B2_Mm2 SINE B2 -5 190 25 1 951 1041 152 15 6 chrX 48099950 48100136 -118550160 - B2_Mm2 SINE B2 -19 197 2 1 951 21 0 0 0 chrX 48100136 48100157 -118550139 + AT_rich Low_complexity Low_complexity 1 21 0 1 951 2042 94 7 3 chrX 48100171 48100460 -118549836 - L1_Mus3 LINE L1 -3 6635 6346 1 951 1123 85 6 0 chrX 48100462 48100626 -118549670 + L1_Mus3 LINE L1 5716 5880 -758 1 951 5007 118 9 62 chrX 48100627 48101808 -118548488 + L1Md_F2 LINE L1 298 1413 -4470 1 118 20412 66 1 1 chrX 48101808 48104585 -118545711 + L1Md_F2 LINE L1 2807 5585 -298 1 952 8016 55 1 0 chrX 48104586 48105581 -118544715 + L1Md_F2 LINE L1 5587 6582 0 1 952 3690 83 4 0 chrX 48105591 48106097 -118544199 + L1_Mus3 LINE L1 5862 6369 -269 1 952 310 283 18 9 chrX 48106097 48106211 -118544085 + RCHARR1 DNA MER1_type 840 954 -20 1 952 406 320 0 0 chrX 48106210 48106310 -118543986 + RSINE1 SINE B4 5 104 -61 1 952 348 24 0 0 chrX 48106338 48106379 -118543917 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 952 251 316 71 0 chrX 48106602 48106700 -118543596 + MIRb SINE MIR 156 260 -8 1 952 1511 167 31 78 chrX 48107252 48107571 -118542725 + ORR1A4 LTR MaLR 1 304 -25 1 952 8818 156 42 78 chrX 48107578 48109701 -118540595 + ORR1A4-int LTR MaLR 1 1963 0 1 952 1991 138 6 38 chrX 48109701 48110041 -118540255 + ORR1A4 LTR MaLR 1 329 0 1 952 366 296 44 15 chrX 48110491 48110628 -118539668 + MER97c DNA MER1_type? 34 174 -916 1 952 383 113 14 0 chrX 48110708 48110779 -118539517 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 952 1322 47 0 0 chrX 48111045 48111217 -118539079 - L1_Mus3 LINE L1 -771 5867 5696 1 952 4752 115 43 0 chrX 48111217 48111945 -118538351 + L1_Mus3 LINE L1 5878 6636 -2 1 952 1252 230 73 68 chrX 48112868 48112928 -118537368 - ORR1D2 LTR MaLR 0 370 317 1 952 520 191 26 17 chrX 48112928 48113045 -118537251 + PB1D9 SINE Alu 2 119 -1 1 952 1252 230 73 68 chrX 48113045 48113352 -118536944 - ORR1D2 LTR MaLR -54 316 1 1 952 486 0 0 0 chrX 48113592 48113646 -118536650 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 952 243 114 0 0 chrX 48113650 48113685 -118536611 - Lx9 LINE L1 -563 7081 7047 1 952 786 287 0 0 chrX 48113692 48113894 -118536402 + Lx9 LINE L1 7089 7290 -354 1 952 264 264 56 0 chrX 48114000 48114072 -118536224 + MTE2a LTR MaLR 18 93 -326 1 952 227 31 31 0 chrX 48114077 48114109 -118536187 + (TCTCCC)n Simple_repeat Simple_repeat 4 36 0 1 952 717 291 80 40 chrX 48114109 48114385 -118535911 + MTE2a LTR MaLR 71 357 -22 1 952 725 76 0 9 chrX 48114876 48114982 -118535314 + (TCTCC)n Simple_repeat Simple_repeat 4 108 0 1 952 696 223 159 10 chrX 48114993 48115201 -118535095 - Lx5 LINE L1 -91 6959 6721 2 952 514 366 32 53 chrX 48116116 48116399 -118533897 + Charlie1a DNA MER1_type 6 282 -1173 2 952 914 211 10 0 chrX 48116402 48116596 -118533700 + Lx5 LINE L1 6835 7030 -20 2 952 1185 136 33 0 chrX 48116638 48116822 -118533474 + B2_Mm2 SINE B2 3 192 -3 2 952 450 122 0 0 chrX 48117484 48117558 -118532738 + L1VL2 LINE L1 135 208 -6127 2 952 5739 80 70 6 chrX 48117558 48119228 -118531068 + L1VL2 LINE L1 1 1796 -1819 2 952 345 337 81 24 chrX 48119592 48119802 -118530494 + MLT1K LTR MaLR 372 593 -2 2 952 32841 71 7 2 chrX 48119935 48126366 -118523930 - L1Md_F2 LINE L1 -12 6570 108 2 952 349 209 35 26 chrX 48126365 48126478 -118523818 - L1VL1 LINE L1 -6127 295 182 2 952 204 40 0 0 chrX 48126712 48126737 -118523559 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 2 952 462 36 0 0 chrX 48126737 48126793 -118523503 + (GGAA)n Simple_repeat Simple_repeat 1 56 0 2 952 227 0 0 0 chrX 48127186 48127213 -118523083 + L1_Mus1 LINE L1 6030 6056 -511 2 952 5581 82 57 4 chrX 48127235 48128474 -118521822 - L1_Mus2 LINE L1 0 6566 5249 2 952 387 0 0 0 chrX 48128474 48128517 -118521779 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 952 4946 172 5 86 chrX 48128517 48128927 -118521369 - L1_Mus2 LINE L1 -619 5267 4939 2 952 585 298 52 15 chrX 48129059 48129386 -118520910 + L1_Mur3 LINE L1 2078 2416 -3464 2 952 820 292 81 23 chrX 48129386 48129673 -118520623 + B4A SINE B4 1 292 0 2 952 240 86 0 0 chrX 48129687 48129722 -118520574 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 952 814 234 84 19 chrX 48129849 48130140 -118520156 + Lx5 LINE L1 6678 7050 0 2 952 757 299 100 42 chrX 48130158 48130727 -118519569 + L1_Mur3 LINE L1 2520 3121 -2759 2 952 379 260 71 32 chrX 48130722 48130877 -118519419 + Lx8 LINE L1 6937 7097 -376 2 952 262 233 113 104 chrX 48131095 48131200 -118519096 + L1_Rod LINE L1 3117 3222 -2625 2 952 225 0 0 0 chrX 48131200 48131225 -118519071 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2 952 659 261 0 0 chrX 48131227 48131361 -118518935 - B1_Mur1 SINE Alu -13 136 3 2 952 262 233 113 104 chrX 48131361 48131482 -118518814 + L1_Rod LINE L1 3223 3348 -2499 2 952 435 257 14 42 chrX 48131483 48131642 -118518654 + B1F2 SINE Alu 2 148 -1 2 952 473 215 0 6 chrX 48131782 48131946 -118518350 + (TA)n Simple_repeat Simple_repeat 1 162 0 2 952 595 331 11 16 chrX 48131946 48132135 -118518161 - B3A SINE B2 -13 203 28 2 952 955 295 53 17 chrX 48132178 48132678 -118517618 + L1_Mur3 LINE L1 3490 4006 -2134 2 952 450 223 91 97 chrX 48132702 48132752 -118517544 - ORR1D2 LTR MaLR -40 330 287 2 952 1233 190 0 13 chrX 48132752 48132981 -118517315 + URR1A DNA MER1_type 1 226 0 2 952 450 224 91 97 chrX 48132981 48133086 -118517210 - ORR1D2 LTR MaLR -93 301 178 2 952 361 275 28 42 chrX 48133086 48133219 -118517077 + B1F2 SINE Alu 5 137 -12 2 952 183 42 0 0 chrX 48133219 48133243 -118517053 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 2 952 260 272 80 97 chrX 48133253 48133303 -118516993 - ORR1D2 LTR MaLR -203 191 143 2 952 958 268 41 5 chrX 48133304 48133672 -118516624 + L1_Mur3 LINE L1 5356 5736 -561 2 952 634 295 75 75 chrX 48133728 48134050 -118516246 - MLT1B LTR MaLR -1 389 68 2 952 322 211 22 11 chrX 48134445 48134536 -118515760 + L1M4 LINE L1 2222 2313 -3833 2 952 360 262 48 19 chrX 48134605 48134710 -118515586 + PB1D10 SINE Alu 10 117 0 2 952 847 240 31 0 chrX 48134712 48134904 -118515392 + B3A SINE B2 1 198 0 2 952 696 305 77 28 chrX 48135045 48135511 -118514785 + L1ME1 LINE L1 5634 6122 -57 2 952 2304 196 16 16 chrX 48136247 48136697 -118513599 - Lx5 LINE L1 -6 7044 6595 2 952 384 149 157 9 chrX 48137628 48137736 -118512560 - L1MEc LINE L1 -4497 1903 1780 2 952 1786 236 39 20 chrX 48137755 48138265 -118512031 - L1MEc LINE L1 -5500 900 381 2 952 342 374 66 22 chrX 48138298 48138481 -118511815 - L1MEc LINE L1 -6099 301 111 2 952 271 215 0 0 chrX 48138796 48138861 -118511435 + T-rich Low_complexity Low_complexity 1 65 0 2 952 238 188 47 94 chrX 48138885 48138991 -118511305 - L1M2 LINE L1 -1449 4694 4594 2 952 1628 225 97 0 chrX 48139089 48139462 -118510834 + MTD LTR MaLR 3 411 -8 2 952 261 337 0 21 chrX 48139635 48139732 -118510564 - L2a LINE L2 -257 3169 3075 2 952 180 0 0 0 chrX 48139835 48139855 -118510441 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 952 279 363 186 20 chrX 48139900 48140299 -118509997 - L2a LINE L2 -352 3067 2603 2 952 839 257 24 33 chrX 48140302 48140515 -118509781 - B3 SINE B2 -4 212 2 2 952 1026 340 161 40 chrX 48140575 48141690 -118508606 - L2a LINE L2 -872 2547 1298 2 952 535 303 82 41 chrX 48142023 48142364 -118507932 - ORR1E LTR MaLR -2 357 3 2 952 568 351 28 69 chrX 48142845 48143163 -118507133 + ORR1E LTR MaLR 51 355 -4 2 952 361 343 57 19 chrX 48143635 48143837 -118506459 - MIR SINE MIR -37 231 25 2 952 270 81 0 0 chrX 48143853 48143890 -118506406 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 2 952 459 320 0 45 chrX 48143893 48144050 -118506246 - RSINE1 SINE B4 -14 151 2 2 952 341 321 114 40 chrX 48145023 48145198 -118505098 - Lx8 LINE L1 -181 7292 7105 2 952 236 311 0 39 chrX 48145202 48145279 -118505017 - PB1D10 SINE Alu -13 104 31 2 952 234 324 0 47 chrX 48145977 48146084 -118504212 + BC1_Mm scRNA scRNA 3 104 -48 2 952 1417 260 53 38 chrX 48146368 48147283 -118503013 + RMER1B Other Other 1 450 -616 2 952 657 142 0 0 chrX 48148424 48148565 -118501731 + (CA)n Simple_repeat Simple_repeat 2 142 0 2 952 244 287 16 107 chrX 48148633 48148754 -118501542 - B4A SINE B4 -43 249 140 2 952 826 168 0 0 chrX 48148844 48148975 -118501321 - B1_Mur4 SINE Alu -3 147 17 2 952 225 195 0 0 chrX 48149116 48149157 -118501139 - B1_Mur2 SINE Alu -7 142 102 2 952 663 278 6 18 chrX 48149303 48149468 -118500828 + B4A SINE B4 3 165 -127 2 952 308 309 110 8 chrX 48149950 48150077 -118500219 + MIR SINE MIR 21 160 -102 2 952 294 29 0 0 chrX 48151255 48151290 -118499006 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 952 363 60 0 0 chrX 48151525 48151575 -118498721 + (CATA)n Simple_repeat Simple_repeat 1 50 0 2 952 370 319 142 24 chrX 48152125 48152337 -118497959 + MIR SINE MIR 20 256 -6 2 952 250 278 8 122 chrX 48152717 48152848 -118497448 - RLTR25A LTR ERVK -470 633 518 2 952 776 145 14 8 chrX 48152744 48152883 -118497413 - B1_Mur3 SINE Alu -8 141 3 2 952 1697 42 0 0 chrX 48153966 48154178 -118496118 + L1Md_F2 LINE L1 5375 5586 -297 2 952 8022 50 0 12 chrX 48154178 48155172 -118495124 + L1Md_F2 LINE L1 5587 6568 -14 2 952 189 147 0 0 chrX 48155427 48155461 -118494835 + (TTG)n Simple_repeat Simple_repeat 2 35 0 2 952 264 176 0 0 chrX 48155453 48155521 -118494775 + CT-rich Low_complexity Low_complexity 2 69 0 2 952 21 0 0 0 chrX 48155523 48155544 -118494752 + AT_rich Low_complexity Low_complexity 1 21 0 2 952 218 160 20 0 chrX 48155625 48155675 -118494621 + (TTA)n Simple_repeat Simple_repeat 2 52 0 2 952 763 244 132 43 chrX 48155863 48156120 -118494176 - B4 SINE B4 -12 280 1 2 952 5151 103 16 4 chrX 48156895 48157623 -118492673 + RMER19A LTR ERVK 1 737 0 2 952 383 277 77 0 chrX 48157992 48158122 -118492174 - ID_B1 SINE B4 -8 216 77 2 952 747 179 22 0 chrX 48159800 48159934 -118490362 - B1_Mus1 SINE Alu 0 148 12 2 952 440 304 24 37 chrX 48159934 48159964 -118490332 - ID_B1 SINE B4 0 224 63 2 952 504 0 0 0 chrX 48161056 48161112 -118489184 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 952 232 316 18 0 chrX 48161112 48161169 -118489127 - ID4_ SINE ID -18 65 8 2 952 356 282 80 8 chrX 48161193 48161318 -118488978 - ID_B1 SINE B4 -8 216 83 2 952 637 286 32 42 chrX 48161631 48161821 -118488475 - B3A SINE B2 0 198 11 2 952 2072 42 0 93 chrX 48162587 48162900 -118487396 - RLTR10B LTR ERVK 0 292 9 2 952 329 48 0 0 chrX 48162922 48162964 -118487332 - RLTR10B LTR ERVK -250 42 1 2 952 27 49 0 0 chrX 48163246 48163287 -118487009 + AT_rich Low_complexity Low_complexity 1 41 0 2 952 1188 76 0 0 chrX 48163415 48163573 -118486723 - L1_Mus1 LINE L1 0 6567 6410 2 952 28371 11 1 4 chrX 48163574 48168952 -118481344 + L1Md_T LINE L1 244 5586 -297 2 952 9056 4 0 0 chrX 48168952 48169948 -118480348 + L1Md_T LINE L1 5587 6582 0 2 952 2523 17 0 3 chrX 48169948 48170241 -118480055 + L1_Mm LINE L1 5294 5586 -297 2 952 8943 10 0 0 chrX 48170241 48171237 -118479059 + L1Md_A LINE L1 5587 6582 0 2 952 1686 50 0 5 chrX 48171239 48171460 -118478836 - L1_Mus1 LINE L1 -143 6424 6205 2 952 4288 84 44 5 chrX 48171501 48172111 -118478185 + L1_Mus3 LINE L1 5998 6631 -7 2 952 513 245 82 15 chrX 48172138 48172333 -118477963 - L1MB1 LINE L1 -265 5924 5717 2 952 186 326 206 0 chrX 48174087 48174228 -118476068 + MIRb SINE MIR 40 209 -59 2 952 241 224 68 82 chrX 48174349 48174422 -118475874 - ID4 SINE ID -6 77 6 2 952 1192 43 0 24 chrX 48175503 48175668 -118474628 + (TATATG)n Simple_repeat Simple_repeat 2 162 0 2 952 298 361 16 16 chrX 48175911 48176032 -118474264 - MamSINE1 SINE tRNA -143 147 27 2 952 560 214 243 44 chrX 48176595 48176776 -118473520 + ID_B1 SINE B4 3 219 -5 2 952 327 344 16 24 chrX 48178305 48178430 -118471866 + MER5A DNA MER1_type 61 184 -5 2 952 21 36 0 0 chrX 48178690 48178718 -118471578 + AT_rich Low_complexity Low_complexity 1 28 0 2 952 606 273 86 53 chrX 48178817 48179119 -118471177 + RMER10A LTR ERVL 123 434 -8 2 952 930 266 81 14 chrX 48179149 48179446 -118470850 - Lx8 LINE L1 -121 7352 7036 2 952 1278 262 85 32 chrX 48179482 48179975 -118470321 - Lx8 LINE L1 -558 6915 6397 2 952 256 118 59 0 chrX 48180263 48180321 -118469975 - Lx5 LINE L1 -228 6748 6662 2 952 21 0 0 0 chrX 48180933 48180954 -118469342 + AT_rich Low_complexity Low_complexity 1 21 0 2 952 423 0 0 0 chrX 48181468 48181515 -118468781 + (TCCA)n Simple_repeat Simple_repeat 4 50 0 2 952 388 258 77 100 chrX 48182515 48182774 -118467522 - CR1_Mam LINE CR1 -794 1410 1158 2 952 537 274 38 6 chrX 48182883 48183041 -118467255 + RSINE1 SINE B4 2 164 -1 2 952 371 303 202 6 chrX 48183134 48183466 -118466830 + Lx9 LINE L1 7208 7604 -40 2 952 208 250 36 0 chrX 48183889 48183945 -118466351 - MIR SINE MIR -8 254 197 3 952 242 232 12 35 chrX 48184096 48184181 -118466115 + L1ME3A LINE L1 6091 6173 0 3 952 314 80 0 20 chrX 48184219 48184270 -118466026 + (TTTC)n Simple_repeat Simple_repeat 1 50 0 3 952 234 352 62 54 chrX 48184273 48184402 -118465894 - MIR SINE MIR -128 134 5 3 952 223 354 12 0 chrX 48185567 48185649 -118464647 + MIR SINE MIR 12 94 -168 3 952 298 314 63 64 chrX 48185790 48185962 -118464334 + MIR SINE MIR 90 267 -1 3 952 202 326 20 50 chrX 48187363 48187463 -118462833 + L2c LINE L2 1040 1136 -2283 3 952 283 407 35 25 chrX 48187477 48187759 -118462537 + L2c LINE L2 2575 2859 -560 3 952 203 328 0 144 chrX 48188066 48188205 -118462091 + L2c LINE L2 3029 3147 -240 3 952 418 330 0 25 chrX 48188255 48188376 -118461920 - PB1D7 SINE Alu 0 120 3 3 952 585 0 0 0 chrX 48189496 48189561 -118460735 + (TC)n Simple_repeat Simple_repeat 1 65 0 3 952 278 36 71 0 chrX 48189900 48189956 -118460340 + (TTTTG)n Simple_repeat Simple_repeat 1 60 0 3 952 420 305 122 29 chrX 48190766 48190938 -118459358 - MER20 DNA MER1_type -4 215 28 3 952 909 74 0 0 chrX 48191049 48191171 -118459125 + (TCTA)n Simple_repeat Simple_repeat 1 122 0 3 952 395 209 84 42 chrX 48191225 48191320 -118458976 - RSINE1 SINE B4 -61 104 6 3 952 1042 30 0 0 chrX 48191469 48191602 -118458694 + L1Md_T LINE L1 6450 6582 0 3 952 186 268 28 14 chrX 48192526 48192598 -118457698 - L2a LINE L2 -11 3415 3343 3 952 747 234 7 0 chrX 48192963 48193100 -118457196 + B1_Mur1 SINE Alu 1 138 -11 3 952 188 67 0 32 chrX 48193101 48193132 -118457164 + (CAAA)n Simple_repeat Simple_repeat 4 33 0 3 952 338 292 79 90 chrX 48193132 48193167 -118457129 + MT2B LTR ERVL 300 335 -266 3 952 225 216 13 39 chrX 48196655 48196732 -118453564 + (ATTTG)n Simple_repeat Simple_repeat 4 78 0 3 952 376 102 17 0 chrX 48199035 48199094 -118451202 + B1_Mus2 SINE Alu 88 147 0 3 952 343 255 95 29 chrX 48200306 48200411 -118449885 + B4A SINE B4 3 114 -178 3 952 216 309 150 7 chrX 48200411 48200459 -118449837 + B2_Mm2 SINE B2 3 177 -18 3 952 27 29 0 0 chrX 48200557 48200591 -118449705 + AT_rich Low_complexity Low_complexity 1 34 0 3 952 712 201 109 6 chrX 48201159 48201324 -118448972 - B3 SINE B2 -3 213 32 3 952 691 57 7 9 chrX 48201387 48201503 -118448793 - L1_Mus2 LINE L1 0 6584 6470 3 952 217 325 25 12 chrX 48201795 48201876 -118448420 - ID SINE ID -141 83 2 3 952 186 71 0 0 chrX 48201879 48201907 -118448389 + (A)n Simple_repeat Simple_repeat 1 28 0 3 952 411 21 0 0 chrX 48203712 48203760 -118446536 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 952 1027 113 183 0 chrX 48204620 48204806 -118445490 - URR1B DNA MER1_type -5 220 1 3 952 498 219 73 84 chrX 48204825 48205004 -118445292 - MER5A DNA MER1_type -11 178 2 3 952 233 250 12 73 chrX 48205472 48205554 -118444742 - U4 snRNA snRNA -68 77 1 3 952 189 0 0 0 chrX 48208077 48208098 -118442198 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3 952 204 143 0 28 chrX 48209169 48209205 -118441091 + (TTG)n Simple_repeat Simple_repeat 1 35 0 3 952 297 308 135 0 chrX 48209239 48209341 -118440955 - B1F SINE Alu -5 115 3 3 952 220 284 129 47 chrX 48209265 48209350 -118440946 - ID_B1 SINE B4 -57 167 76 3 952 226 98 19 19 chrX 48209604 48209656 -118440640 + (TTTTTG)n Simple_repeat Simple_repeat 5 56 0 3 952 258 56 0 0 chrX 48209921 48209957 -118440339 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 952 243 0 0 0 chrX 48210096 48210123 -118440173 + (CAA)n Simple_repeat Simple_repeat 2 28 0 3 952 232 238 127 0 chrX 48210136 48210199 -118440097 - ID4_ SINE ID -12 71 1 3 952 24 32 0 0 chrX 48211989 48212020 -118438276 + AT_rich Low_complexity Low_complexity 1 31 0 3 952 269 181 0 95 chrX 48212602 48212718 -118437578 - Lx8 LINE L1 0 7473 7369 3 952 339 89 0 0 chrX 48212719 48212775 -118437521 + (TAA)n Simple_repeat Simple_repeat 1 56 0 3 952 381 58 0 0 chrX 48212897 48212949 -118437347 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 952 591 15 0 0 chrX 48212952 48213020 -118437276 + (GA)n Simple_repeat Simple_repeat 1 68 0 3 952 190 219 24 0 chrX 48213191 48213232 -118437064 - MIR3 SINE MIR -10 198 157 3 952 189 0 0 0 chrX 48215007 48215028 -118435268 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 952 204 40 0 0 chrX 48215122 48215147 -118435149 + (TTA)n Simple_repeat Simple_repeat 1 25 0 3 952 21 36 0 0 chrX 48217245 48217273 -118433023 + AT_rich Low_complexity Low_complexity 1 28 0 3 952 323 235 84 45 chrX 48217570 48217748 -118432548 - L1MA6 LINE L1 -262 6038 5854 3 952 981 190 114 5 chrX 48218593 48218794 -118431502 - URR1A DNA MER1_type -3 223 1 3 952 432 0 0 0 chrX 48218984 48219032 -118431264 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 952 182 363 11 0 chrX 48219044 48219135 -118431161 - MER5B DNA MER1_type -82 96 5 3 952 217 93 47 0 chrX 48219280 48219323 -118430973 + (TTTTTG)n Simple_repeat Simple_repeat 3 47 0 3 952 405 102 0 0 chrX 48219487 48219546 -118430750 + (GGGA)n Simple_repeat Simple_repeat 2 60 0 3 952 440 298 33 8 chrX 48220215 48220337 -118429959 + B4 SINE B4 1 125 -167 3 952 529 288 28 41 chrX 48220396 48220541 -118429755 + RSINE1 SINE B4 2 144 -21 3 952 339 85 0 0 chrX 48220553 48220600 -118429696 + (TGG)n Simple_repeat Simple_repeat 1 47 0 3 952 306 261 34 34 chrX 48220987 48221106 -118429190 + PB1D7 SINE Alu 1 119 -1 3 952 693 0 0 0 chrX 48221972 48222049 -118428247 + (GTTTG)n Simple_repeat Simple_repeat 5 81 0 3 952 1006 129 0 0 chrX 48222050 48222189 -118428107 - B1_Mus1 SINE Alu -7 141 3 3 952 1189 269 130 30 chrX 48222329 48223061 -118427235 - L1MA5 LINE L1 -14 6286 5482 3 952 918 231 0 65 chrX 48223144 48223375 -118426921 + B3 SINE B2 1 216 0 3 952 22 56 0 0 chrX 48223784 48223820 -118426476 + AT_rich Low_complexity Low_complexity 1 36 0 3 952 261 310 13 47 chrX 48223990 48224139 -118426157 + L1MA10 LINE L1 6191 6334 0 3 952 659 184 136 0 chrX 48224360 48224485 -118425811 - B1_Mur1 SINE Alu -7 142 1 3 952 281 252 60 18 chrX 48224589 48224807 -118425489 - RMER17D LTR ERVK -368 521 295 3 952 831 98 0 0 chrX 48225595 48225718 -118424578 + (TC)n Simple_repeat Simple_repeat 2 124 0 3 952 183 100 0 0 chrX 48225770 48225800 -118424496 + (GA)n Simple_repeat Simple_repeat 2 31 0 3 952 184 161 0 0 chrX 48226029 48226060 -118424236 - L2c LINE L2 -30 3357 3327 3 952 23 0 0 0 chrX 48226751 48226774 -118423522 + AT_rich Low_complexity Low_complexity 1 23 0 3 952 318 26 0 0 chrX 48227221 48227260 -118423036 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 952 263 310 40 22 chrX 48227369 48227502 -118422794 - PB1D7 SINE Alu -15 134 1 3 952 231 275 0 48 chrX 48229059 48229143 -118421153 - Lx7 LINE L1 -378 7318 7239 3 952 383 265 138 16 chrX 48229166 48229354 -118420942 - L1MB3 LINE L1 -86 6097 5887 3 952 468 51 0 0 chrX 48229465 48229524 -118420772 + (TG)n Simple_repeat Simple_repeat 1 59 0 3 952 592 268 64 81 chrX 48230521 48230817 -118419479 + B4A SINE B4 2 292 0 3 952 1197 116 66 0 chrX 48231012 48231210 -118419086 - Lx3A LINE L1 -6 6975 6765 3 952 301 233 0 0 chrX 48231695 48231755 -118418541 - ID4 SINE ID -9 74 15 3 952 1102 109 37 32 chrX 48232146 48232336 -118417960 - B2_Mm2 SINE B2 -3 192 2 3 952 940 237 5 19 chrX 48233054 48233265 -118417031 + B3 SINE B2 2 209 -7 3 952 752 296 146 43 chrX 48233324 48233652 -118416644 + MLT1A0 LTR MaLR 3 364 -1 3 952 593 302 7 0 chrX 48233852 48233991 -118416305 - RSINE1 SINE B4 -14 151 12 3 952 245 385 20 20 chrX 48234232 48234378 -118415918 + MIR3 SINE MIR 52 197 -11 3 952 231 256 25 0 chrX 48234409 48234466 -118415830 - PB1D10 SINE Alu -27 93 33 3 953 251 280 41 26 chrX 48234577 48234771 -118415525 - L1M2 LINE L1 -1656 4487 4291 3 953 654 181 344 0 chrX 48234784 48234944 -118415352 + B3 SINE B2 2 216 0 3 953 1002 127 65 22 chrX 48235303 48235488 -118414808 - B2_Mm2 SINE B2 -2 193 1 3 953 273 297 82 33 chrX 48235838 48235960 -118414336 + MIR3 SINE MIR 56 183 -25 3 953 22 0 0 0 chrX 48237241 48237263 -118413033 + AT_rich Low_complexity Low_complexity 1 22 0 3 953 795 250 35 10 chrX 48238352 48238554 -118411742 - ID_B1 SINE B4 -16 208 2 3 953 463 314 148 24 chrX 48239285 48239494 -118410802 + L2a LINE L2 2848 3082 -337 3 953 273 300 167 0 chrX 48239569 48239689 -118410607 + L2a LINE L2 3209 3348 -78 3 953 278 82 41 0 chrX 48242104 48242153 -118408143 + (TTTTTG)n Simple_repeat Simple_repeat 3 53 0 3 953 491 82 14 0 chrX 48242310 48242383 -118407913 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 3 953 648 298 70 8 chrX 48243383 48243640 -118406656 - B4A SINE B4 -18 274 2 3 953 243 0 0 0 chrX 48245632 48245659 -118404637 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 953 28 0 0 0 chrX 48246248 48246276 -118404020 + AT_rich Low_complexity Low_complexity 1 28 0 3 953 758 251 20 15 chrX 48247038 48247240 -118403056 + B3 SINE B2 2 204 -12 3 953 354 246 60 11 chrX 48247276 48247397 -118402899 + PB1D10 SINE Alu 12 137 -12 3 953 482 333 40 43 chrX 48250983 48251359 -118398937 + Tigger15a DNA TcMar 300 674 -41 3 953 204 102 0 71 chrX 48253193 48253235 -118397061 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 953 1268 34 0 0 chrX 48253843 48253990 -118396306 + B1_Mus2 SINE Alu 1 147 0 3 953 578 291 63 91 chrX 48255622 48256005 -118394291 + MLT1B LTR MaLR 1 358 -16 4 953 483 18 0 0 chrX 48256630 48256686 -118393610 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 953 465 320 23 34 chrX 48256754 48257016 -118393280 + L1M4 LINE L1 3946 4204 -1942 4 953 247 316 92 0 chrX 48257052 48257204 -118393092 + L1M4 LINE L1 4784 4949 -1197 4 953 220 0 56 28 chrX 48257465 48257501 -118392795 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 4 953 1213 130 5 5 chrX 48257599 48257784 -118392512 + B2_Mm2 SINE B2 1 185 -10 4 953 1565 275 107 37 chrX 48257788 48258414 -118391882 + Lx8 LINE L1 6801 7470 -3 4 953 339 113 0 0 chrX 48258428 48258481 -118391815 + (ATG)n Simple_repeat Simple_repeat 2 54 0 4 953 310 218 138 0 chrX 48258494 48258581 -118391715 + L1M4 LINE L1 5437 5535 -639 4 953 21 0 0 0 chrX 48258659 48258680 -118391616 + AT_rich Low_complexity Low_complexity 1 21 0 4 953 248 279 58 41 chrX 48258708 48258880 -118391416 + L1M4 LINE L1 5626 5800 -644 4 953 302 294 59 32 chrX 48258867 48259053 -118391243 + L1MB7 LINE L1 5811 6001 -183 4 953 233 200 31 0 chrX 48259073 48259138 -118391158 + CT-rich Low_complexity Low_complexity 4 70 0 4 953 464 222 9 69 chrX 48259144 48259260 -118391036 - B1_Mur2 SINE Alu -40 109 1 4 953 981 233 68 5 chrX 48259259 48259466 -118390830 - ID_B1 SINE B4 -3 221 2 4 953 260 227 0 15 chrX 48259577 48259644 -118390652 + L1MB7 LINE L1 6113 6178 -1 4 953 894 133 95 18 chrX 48259695 48259864 -118390432 + B2_Mm2 SINE B2 1 182 -13 4 953 287 347 54 34 chrX 48260266 48260564 -118389732 + L2a LINE L2 2953 3256 -170 4 953 4458 9 0 11 chrX 48260589 48261131 -118389165 - L1_Mm LINE L1 -609 5274 4739 4 953 477 0 0 0 chrX 48261131 48261184 -118389112 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 4 953 398 272 64 53 chrX 48261262 48261433 -118388863 + L2a LINE L2 3252 3424 -2 4 953 226 350 87 1 chrX 48262640 48262780 -118387516 - MIRb SINE MIR -79 189 36 4 953 204 121 30 0 chrX 48263842 48263875 -118386421 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 953 406 324 104 45 chrX 48263883 48264151 -118386145 - B4 SINE B4 -8 284 1 4 953 1320 92 27 0 chrX 48264872 48265056 -118385240 + B2_Mm2 SINE B2 1 189 -6 4 953 1260 148 42 5 chrX 48265399 48265616 -118384680 - URR1B DNA MER1_type 0 225 1 4 953 192 77 0 0 chrX 48265953 48265979 -118384317 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 953 3524 164 150 82 chrX 48266316 48267142 -118383154 + RMER19B LTR ERVK 1 882 -20 4 953 403 253 0 0 chrX 48267266 48267349 -118382947 + ID4_ SINE ID 1 83 0 4 953 213 340 129 43 chrX 48267400 48267563 -118382733 - L2b LINE L2 -2 3373 3197 4 953 213 342 154 6 chrX 48267650 48267812 -118382484 - L2b LINE L2 -508 2911 2726 4 953 209 259 56 0 chrX 48270262 48270316 -118379980 + L2b LINE L2 3308 3364 -11 4 953 262 222 32 0 chrX 48271242 48271305 -118378991 - L3b LINE CR1 -88 394 330 4 953 875 125 24 0 chrX 48271464 48271632 -118378664 + (TC)n Simple_repeat Simple_repeat 1 172 0 4 953 978 53 0 0 chrX 48271708 48271840 -118378456 - L1Md_T LINE L1 0 6582 6451 4 953 351 295 0 0 chrX 48272506 48272584 -118377712 - ID4 SINE ID -4 79 2 4 953 949 116 0 45 chrX 48272800 48272954 -118377342 - B1_Mus1 SINE Alu 0 148 2 4 953 450 331 0 33 chrX 48273186 48273339 -118376957 + MIRb SINE MIR 87 234 -34 4 953 330 310 154 22 chrX 48273570 48273837 -118376459 + Tigger13a DNA MER2_type 50 351 -420 4 953 242 318 62 97 chrX 48273893 48274151 -118376145 + Tigger13a DNA MER2_type 440 688 -83 4 953 738 266 129 84 chrX 48274618 48274975 -118375321 - MLT1A LTR MaLR 0 374 2 4 953 456 77 0 0 chrX 48275013 48275078 -118375218 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 953 436 241 8 57 chrX 48275264 48275387 -118374909 - PB1D10 SINE Alu 0 117 1 4 953 1742 134 27 7 chrX 48275559 48275852 -118374444 + Lx2A LINE L1 6708 7006 -2 4 953 190 330 87 29 chrX 48275852 48275955 -118374341 + MIRb SINE MIR 28 136 -132 4 953 543 287 39 46 chrX 48275961 48276268 -118374028 + L1MB7 LINE L1 5860 6164 -20 4 953 499 279 8 0 chrX 48276369 48276498 -118373798 - MER94 DNA AcHobo 0 134 5 4 953 3018 77 0 41 chrX 48277200 48277636 -118372660 + L1Md_F2 LINE L1 6164 6581 -1 4 953 486 0 0 0 chrX 48278121 48278175 -118372121 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 953 837 97 27 20 chrX 48278584 48278731 -118371565 - URR1A DNA MER1_type 0 226 79 4 953 342 291 27 9 chrX 48279024 48279135 -118371161 + RSINE1 SINE B4 2 114 -51 4 953 180 0 0 0 chrX 48279169 48279189 -118371107 + (TC)n Simple_repeat Simple_repeat 1 20 0 4 953 22 70 0 0 chrX 48279191 48279234 -118371062 + AT_rich Low_complexity Low_complexity 1 43 0 4 953 5475 43 1 92 chrX 48279343 48280136 -118370160 - L1Md_F2 LINE L1 -1 6581 5861 4 953 930 54 0 0 chrX 48281943 48282072 -118368224 + (CATCT)n Simple_repeat Simple_repeat 3 131 0 4 953 351 0 0 0 chrX 48282072 48282111 -118368185 + (TC)n Simple_repeat Simple_repeat 2 40 0 4 953 246 62 0 0 chrX 48282149 48282181 -118368115 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 4 953 22 0 0 0 chrX 48282799 48282821 -118367475 + AT_rich Low_complexity Low_complexity 1 22 0 4 953 943 152 7 0 chrX 48284220 48284365 -118365931 + B1_Mus2 SINE Alu 1 146 -1 4 953 326 280 27 0 chrX 48284458 48284533 -118365763 - ID4_ SINE ID -2 81 5 4 953 248 315 35 26 chrX 48284546 48284660 -118365636 - B1F SINE Alu -18 131 17 4 953 604 228 0 0 chrX 48285027 48285154 -118365142 - L1MA8 LINE L1 -5 6286 6160 4 953 419 285 0 68 chrX 48285397 48285529 -118364767 + ID_B1 SINE B4 98 220 -4 4 953 222 118 0 0 chrX 48288039 48288073 -118362223 + (TGGGGG)n Simple_repeat Simple_repeat 5 38 0 4 953 342 0 0 0 chrX 48288306 48288344 -118361952 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 953 299 244 129 29 chrX 48288934 48289073 -118361223 - MIR SINE MIR -12 250 98 4 953 313 334 70 75 chrX 48290273 48290645 -118359651 - MER34A LTR ERV1 -187 384 15 4 953 2365 136 0 8 chrX 48290645 48291016 -118359280 - Lx3C LINE L1 -241 6735 6368 4 953 247 264 0 0 chrX 48293635 48293707 -118356589 - ID_B1 SINE B4 -1 223 152 4 953 243 0 0 0 chrX 48294145 48294172 -118356124 + (CCA)n Simple_repeat Simple_repeat 1 27 0 4 953 396 0 0 0 chrX 48296455 48296499 -118353797 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 953 580 311 43 74 chrX 48297031 48297423 -118352873 + MLT1B LTR MaLR 4 383 -7 4 953 247 319 14 0 chrX 48297681 48297753 -118352543 + ID SINE ID 9 81 -143 4 953 225 204 0 0 chrX 48297753 48297797 -118352499 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 4 953 7013 150 55 11 chrX 48297920 48299614 -118350682 + Lx4B LINE L1 5223 7010 -48 4 953 41 58 0 0 chrX 48299625 48299694 -118350602 + AT_rich Low_complexity Low_complexity 1 69 0 4 953 405 0 0 0 chrX 48299718 48299763 -118350533 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 953 433 269 134 0 chrX 48300441 48300560 -118349736 - RSINE1 SINE B4 -29 136 2 4 953 325 209 164 0 chrX 48300633 48300743 -118349553 + Lx9 LINE L1 7346 7473 -171 4 953 31 0 0 0 chrX 48300809 48300840 -118349456 + AT_rich Low_complexity Low_complexity 1 31 0 4 953 279 0 0 0 chrX 48301128 48301159 -118349137 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 953 1013 255 141 36 chrX 48302514 48302847 -118347449 - ORR1D2 LTR MaLR 0 370 3 4 953 239 325 55 0 chrX 48302849 48302953 -118347343 + PB1D10 SINE Alu 12 122 -27 4 953 312 27 0 0 chrX 48303009 48303046 -118347250 + (TC)n Simple_repeat Simple_repeat 2 38 0 4 953 345 100 0 0 chrX 48303046 48303096 -118347200 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 953 616 35 35 0 chrX 48303098 48303184 -118347112 + (TCTA)n Simple_repeat Simple_repeat 2 90 0 4 953 379 222 0 0 chrX 48303184 48303265 -118347031 + B1_Mur1 SINE Alu 63 143 -6 4 953 242 296 0 69 chrX 48303316 48303403 -118346893 + ID4_ SINE ID 3 83 0 4 953 900 293 102 31 chrX 48303715 48304039 -118346257 - MTD LTR MaLR -25 394 48 4 953 232 298 0 0 chrX 48304246 48304293 -118346003 - RSINE1 SINE B4 -13 152 106 4 953 24 32 0 0 chrX 48304323 48304354 -118345942 + AT_rich Low_complexity Low_complexity 1 31 0 4 953 349 309 15 31 chrX 48304437 48304567 -118345729 - RSINE1 SINE B4 -35 130 3 4 953 1933 224 59 65 chrX 48304567 48305084 -118345212 + RCHARR1 DNA MER1_type 315 822 -152 4 953 720 260 216 13 chrX 48305084 48305399 -118344897 + MTEa LTR MaLR 1 379 0 4 953 1933 224 59 65 chrX 48305399 48305530 -118344766 + RCHARR1 DNA MER1_type 823 959 -15 4 953 809 267 93 62 chrX 48305566 48305659 -118344637 - L1MA6 LINE L1 -250 6050 5952 4 953 321 47 0 0 chrX 48305659 48305702 -118344594 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 953 290 312 21 35 chrX 48305705 48305848 -118344448 - B1F2 SINE Alu -6 143 3 4 953 809 287 83 54 chrX 48305848 48306182 -118344114 - L1MA6 LINE L1 -349 5951 5606 4 953 406 299 0 8 chrX 48306268 48306386 -118343910 + RSINE1 SINE B4 4 120 -45 4 953 403 277 77 65 chrX 48306714 48307143 -118343153 + L1M4b LINE L1 1372 1805 -5529 4 953 816 303 116 31 chrX 48307425 48308157 -118342139 + L1M4b LINE L1 2970 3763 -3243 4 953 609 168 0 0 chrX 48308173 48308274 -118342022 - B1_Mur2 SINE Alu -14 135 35 4 953 189 0 0 0 chrX 48308282 48308303 -118341993 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 4 953 293 236 21 43 chrX 48308352 48308445 -118341851 - ID_B1 SINE B4 -3 221 131 4 953 313 211 110 50 chrX 48308477 48308577 -118341719 + L1M4b LINE L1 4362 4467 -2539 4 953 268 179 18 0 chrX 48308613 48308669 -118341627 + ID_B1 SINE B4 129 185 -39 4 953 210 234 21 0 chrX 48308689 48308736 -118341560 + GA-rich Low_complexity Low_complexity 1 48 0 4 953 471 249 151 22 chrX 48308766 48308951 -118341345 + L1M4b LINE L1 4512 4720 -2286 4 953 729 340 41 41 chrX 48308951 48309344 -118340952 + MLT1D LTR MaLR 1 393 -112 4 953 3044 40 45 8 chrX 48309344 48309726 -118340570 + MTA_Mm LTR MaLR 1 396 0 4 953 571 76 0 0 chrX 48310083 48310162 -118340134 + B1_Mur4 SINE Alu 72 150 0 4 953 496 321 87 121 chrX 48311057 48311766 -118338530 + MLT1D-int LTR MaLR 713 1458 -31 4 953 1029 109 0 0 chrX 48311877 48312015 -118338281 - B1_Mus1 SINE Alu -9 139 2 4 953 601 318 115 30 chrX 48312020 48312455 -118337841 + MLT1D LTR MaLR 34 505 0 4 953 4702 36 7 0 chrX 48312498 48313050 -118337246 - L1Md_F2 LINE L1 0 6582 6027 5 953 524 289 64 10 chrX 48313107 48313310 -118336986 + B3 SINE B2 1 214 -2 5 953 302 280 21 11 chrX 48313627 48313721 -118336575 + L1M4b LINE L1 4928 5022 -1984 4 953 405 145 0 0 chrX 48313729 48313805 -118336491 + (TG)n Simple_repeat Simple_repeat 2 77 0 5 953 331 258 108 13 chrX 48313830 48313987 -118336309 + L1M4b LINE L1 5070 5241 -1765 4 953 411 220 39 20 chrX 48314245 48314347 -118335949 + PB1D10 SINE Alu 12 115 -2 5 953 622 251 80 43 chrX 48314884 48315182 -118335114 + L1M4b LINE L1 6093 6403 -621 4 953 356 0 23 0 chrX 48315182 48315226 -118335070 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 953 622 250 82 46 chrX 48315226 48315254 -118335042 + L1M4b LINE L1 6404 6430 -594 4 953 401 350 43 8 chrX 48315251 48315403 -118334893 - L1MC1 LINE L1 -500 5833 5674 5 953 261 0 0 0 chrX 48315403 48315432 -118334864 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 953 401 350 43 8 chrX 48315432 48315535 -118334761 - L1MC1 LINE L1 -660 5673 5570 5 953 245 356 32 59 chrX 48315726 48315947 -118334349 + LTR16A1 LTR ERVL 242 456 0 5 953 180 281 209 45 chrX 48316248 48316382 -118333914 - MIR SINE MIR -50 212 57 5 953 235 139 0 0 chrX 48316801 48316844 -118333452 - Lx9 LINE L1 -1 7643 7601 5 953 1506 292 76 54 chrX 48317237 48317906 -118332390 + Lx8 LINE L1 6038 6721 -752 5 953 475 283 88 26 chrX 48317910 48318050 -118332246 + B3 SINE B2 3 154 -62 5 953 299 25 25 0 chrX 48318050 48318090 -118332206 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 953 475 283 88 26 chrX 48318090 48318127 -118332169 + B3 SINE B2 155 192 -24 5 953 1212 42 0 7 chrX 48318127 48318272 -118332024 + B1_Mus1 SINE Alu 4 147 -1 5 953 475 283 88 26 chrX 48318272 48318285 -118332011 + B3 SINE B2 193 205 -11 5 953 329 179 18 0 chrX 48318295 48318351 -118331945 + Lx8 LINE L1 6712 6768 -705 5 953 991 300 95 0 chrX 48318376 48318703 -118331593 + Lx8 LINE L1 6828 7185 -288 5 953 261 94 57 0 chrX 48318730 48318783 -118331513 - L1Md_F2 LINE L1 -1 6581 6526 5 953 3493 87 4 2 chrX 48319004 48319477 -118330819 + L1_Mus4 LINE L1 6158 6631 -5 5 953 685 276 26 40 chrX 48319486 48319712 -118330584 + ID_B1 SINE B4 1 223 -1 5 953 258 346 14 50 chrX 48321318 48321458 -118328838 + Tigger10 DNA Tigger 1698 1832 -11 5 953 247 317 19 28 chrX 48322363 48322470 -118327826 + B1_Mur2 SINE Alu 26 131 -18 5 953 864 97 0 0 chrX 48322477 48322601 -118327695 + (GAAA)n Simple_repeat Simple_repeat 4 127 0 5 953 684 251 42 26 chrX 48322954 48323146 -118327150 - B3A SINE B2 -1 197 3 5 953 676 256 92 22 chrX 48323213 48323441 -118326855 - MLT1J LTR MaLR -229 283 40 5 953 228 67 0 0 chrX 48323636 48323666 -118326630 + (TTA)n Simple_repeat Simple_repeat 1 30 0 5 953 471 260 3 12 chrX 48323701 48323819 -118326477 - PB1D10 SINE Alu -2 115 2 5 953 1175 219 119 127 chrX 48323896 48324298 -118325998 - MTD LTR MaLR -9 410 12 5 953 1849 158 68 3 chrX 48324331 48324668 -118325628 + ORR1B2 LTR MaLR 1 359 -8 5 953 1247 158 18 13 chrX 48325181 48325405 -118324891 - URR1B DNA MER1_type 0 225 1 5 953 523 282 86 0 chrX 48325756 48325919 -118324377 + MTEb LTR MaLR 4 180 -199 5 953 525 282 117 0 chrX 48326041 48326229 -118324067 + MTEb LTR MaLR 168 377 -2 5 953 1193 41 7 0 chrX 48326398 48326543 -118323753 + B1_Mus1 SINE Alu 3 148 0 5 953 279 196 0 0 chrX 48326996 48327047 -118323249 - Lx8 LINE L1 -1565 5908 5858 5 953 186 71 0 0 chrX 48327064 48327092 -118323204 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 5 953 601 286 85 10 chrX 48327096 48327297 -118322999 - ID_B1 SINE B4 0 224 9 5 953 508 276 97 6 chrX 48327331 48327506 -118322790 - B3A SINE B2 -5 193 3 5 953 727 286 14 0 chrX 48327541 48327751 -118322545 - ID_B1 SINE B4 -10 214 2 5 953 492 295 8 0 chrX 48327988 48328117 -118322179 - B1F SINE Alu -10 139 10 5 953 6172 108 9 5 chrX 48328157 48329651 -118320645 - L1_Mus4 LINE L1 -255 6381 4882 5 953 1111 130 0 6 chrX 48329664 48329842 -118320454 + L1_Mus4 LINE L1 6459 6635 -1 5 953 502 293 0 0 chrX 48330282 48330429 -118319867 - B1F1 SINE Alu -1 148 2 5 953 1877 291 77 5 chrX 48330821 48331557 -118318739 + L1MC2 LINE L1 5440 6228 -116 5 953 512 298 69 46 chrX 48331565 48331783 -118318513 + B4A SINE B4 4 226 -66 5 953 260 190 17 0 chrX 48331890 48331948 -118318348 + L1MC2 LINE L1 6276 6334 -10 5 953 328 297 74 74 chrX 48332416 48332505 -118317791 - MER2 DNA MER2_type -43 302 204 5 953 1090 277 69 11 chrX 48332505 48332852 -118317444 - ORR1D2 LTR MaLR -1 369 3 5 953 328 297 74 74 chrX 48332852 48332991 -118317305 - MER2 DNA MER2_type -142 203 74 5 953 682 263 103 46 chrX 48333053 48333395 -118316901 - MLT1C LTR MaLR -31 359 9 5 953 368 337 74 0 chrX 48333907 48334070 -118316226 + L2 LINE L2 2286 2460 -959 5 953 200 111 0 27 chrX 48334902 48334939 -118315357 + (TCCC)n Simple_repeat Simple_repeat 2 37 0 5 953 256 102 20 20 chrX 48335258 48335308 -118314988 + (TTCC)n Simple_repeat Simple_repeat 3 52 0 5 953 757 319 26 20 chrX 48335322 48335626 -118314670 - Lx9 LINE L1 -206 7438 7133 5 953 253 239 28 0 chrX 48335936 48336007 -118314289 - L1MC4 LINE L1 -682 7360 7288 5 953 2571 163 130 61 chrX 48336030 48336079 -118314217 - RMER19C LTR ERVK -2 609 569 5 953 3765 173 35 13 chrX 48336079 48336760 -118313536 - Lx2B LINE L1 -13 6987 6292 5 953 2571 163 130 61 chrX 48336760 48337280 -118313016 - RMER19C LTR ERVK -43 568 1 5 953 448 235 130 0 chrX 48337660 48337775 -118312521 + Lx8 LINE L1 4469 4598 -1282 5 953 724 280 21 28 chrX 48337773 48338056 -118312240 + L1M2 LINE L1 5285 5565 -735 5 953 3685 151 44 57 chrX 48338058 48339129 -118311167 + RLTR13D1 LTR ERVK 1 1023 0 5 953 3654 294 82 79 chrX 48339141 48339822 -118310474 + Lx8 LINE L1 5588 6197 -1276 5 953 273 57 0 0 chrX 48339822 48339857 -118310439 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 5 953 3654 294 82 79 chrX 48339857 48341001 -118309295 + Lx8 LINE L1 6198 7418 -55 5 953 1196 44 0 7 chrX 48341153 48341289 -118309007 + B1_Mm SINE Alu 1 135 -12 5 953 588 29 0 0 chrX 48341289 48341359 -118308937 + (GAAA)n Simple_repeat Simple_repeat 3 72 0 5 953 330 26 0 0 chrX 48341400 48341439 -118308857 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 953 191 355 75 0 chrX 48341466 48341559 -118308737 + MIR SINE MIR 40 139 -69 5 953 480 250 27 20 chrX 48342539 48342686 -118307610 + L1MB8 LINE L1 6031 6178 0 5 953 788 317 38 35 chrX 48344736 48345102 -118305194 + LTR88b LTR Gypsy? 16 382 -455 5 953 218 284 54 0 chrX 48345119 48345193 -118305103 - L2b LINE L2 -5 3370 3293 5 953 257 393 58 22 chrX 48345365 48345503 -118304793 - MER91A DNA Tip100 -46 150 8 5 953 225 298 0 0 chrX 48345838 48345885 -118304411 + LTR88c LTR Genie? 677 723 -139 5 953 1361 224 65 28 chrX 48346222 48346575 -118303721 + ORR1D2 LTR MaLR 5 370 0 5 953 440 204 31 117 chrX 48346932 48347060 -118303236 - MTD LTR MaLR -302 117 1 5 953 2740 76 22 3 chrX 48347232 48347600 -118302696 - L1_Mus3 LINE L1 -7 6631 6257 5 953 286 238 0 23 chrX 48347809 48347895 -118302401 + (CATATA)n Simple_repeat Simple_repeat 5 88 0 5 953 294 29 0 0 chrX 48347915 48347950 -118302346 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 5 953 487 283 116 14 chrX 48347977 48348124 -118302172 - RSINE1 SINE B4 0 165 4 5 953 622 231 49 37 chrX 48348167 48348329 -118301967 - RSINE1 SINE B4 0 165 2 5 953 315 224 270 52 chrX 48348347 48348521 -118301775 - B3 SINE B2 0 216 5 5 953 542 159 37 9 chrX 48348830 48349025 -118301271 + GA-rich Low_complexity Low_complexity 1 200 0 5 953 3100 6 0 0 chrX 48349779 48350116 -118300180 - L1Md_A LINE L1 -59 5824 5488 5 953 7664 12 0 0 chrX 48350116 48350925 -118299371 + L1Md_A LINE L1 5774 6582 0 5 953 182 194 32 0 chrX 48351343 48351374 -118298922 + L4 LINE RTE 1803 1834 -195 5 953 239 309 40 50 chrX 48351518 48351617 -118298679 + B1F SINE Alu 5 102 -47 5 953 926 274 70 20 chrX 48351746 48352044 -118298252 + MTEb LTR MaLR 22 334 -45 5 953 540 0 0 0 chrX 48352777 48352837 -118297459 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 953 219 103 0 0 chrX 48353393 48353432 -118296864 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 953 604 279 116 14 chrX 48354516 48354810 -118295486 - Lx8 LINE L1 -11 7462 7139 5 953 895 278 50 86 chrX 48354836 48355233 -118295063 - Lx8 LINE L1 -444 7029 6647 5 953 492 128 0 0 chrX 48360034 48360112 -118290184 + (CA)n Simple_repeat Simple_repeat 2 79 0 5 953 413 194 40 0 chrX 48360112 48360236 -118290060 + (TGGA)n Simple_repeat Simple_repeat 2 130 0 5 953 187 368 21 0 chrX 48361228 48361323 -118288973 + MIRb SINE MIR 120 216 -52 5 953 1553 71 5 0 chrX 48361469 48361653 -118288643 - B2_Mm1t SINE B2 -7 186 2 5 953 815 149 14 0 chrX 48362816 48362964 -118287332 + CT-rich Low_complexity Low_complexity 4 153 0 5 953 180 0 0 0 chrX 48364420 48364440 -118285856 + (GA)n Simple_repeat Simple_repeat 2 21 0 5 953 450 271 28 88 chrX 48365128 48365310 -118284986 + MER20 DNA MER1_type 1 171 -48 5 954 285 135 0 0 chrX 48368909 48368961 -118281335 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 954 24 0 0 0 chrX 48369333 48369357 -118280939 + AT_rich Low_complexity Low_complexity 1 24 0 5 954 23 78 0 0 chrX 48371404 48371455 -118278841 + GC_rich Low_complexity Low_complexity 1 51 0 5 954 28 0 0 0 chrX 48371534 48371562 -118278734 + GC_rich Low_complexity Low_complexity 1 28 0 5 954 213 262 0 0 chrX 48371634 48371676 -118278620 + G-rich Low_complexity Low_complexity 1 42 0 5 954 221 77 0 49 chrX 48371849 48371890 -118278406 + (CGG)n Simple_repeat Simple_repeat 2 40 0 5 954 28 0 0 0 chrX 48374350 48374378 -118275918 + AT_rich Low_complexity Low_complexity 1 28 0 5 954 469 333 39 13 chrX 48374378 48374533 -118275763 - RSINE1 SINE B4 -4 161 3 5 954 290 309 108 7 chrX 48374787 48374926 -118275370 + MIRb SINE MIR 18 177 -99 5 954 658 255 0 77 chrX 48375042 48375212 -118275084 + ID_B1 SINE B4 63 219 -5 5 954 256 280 205 30 chrX 48375517 48375819 -118274477 - L1MC4a LINE L1 -1973 5909 5555 5 954 273 39 39 19 chrX 48376029 48376081 -118274215 + (TTTTTG)n Simple_repeat Simple_repeat 4 56 0 5 954 1249 55 7 0 chrX 48376082 48376227 -118274069 - B1_Mus1 SINE Alu -1 147 2 5 954 180 270 0 0 chrX 48377762 48377799 -118272497 + L2c LINE L2 3333 3369 -18 5 954 524 287 77 104 chrX 48377859 48378123 -118272173 + B4A SINE B4 2 269 -23 5 954 501 17 0 0 chrX 48378123 48378181 -118272115 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 954 524 287 77 104 chrX 48378181 48378215 -118272081 + B4A SINE B4 270 292 0 5 954 288 370 56 33 chrX 48378346 48378561 -118271735 - MIRb SINE MIR -36 232 13 6 954 186 103 0 0 chrX 48378878 48378907 -118271389 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 6 954 224 293 47 35 chrX 48379043 48379128 -118271168 - MIR SINE MIR -74 188 103 6 954 908 127 0 0 chrX 48379225 48379367 -118270929 + URR1B DNA MER1_type 83 224 -1 6 954 1098 83 14 27 chrX 48380067 48380215 -118270081 + B1_Mus1 SINE Alu 3 148 0 6 954 303 71 0 0 chrX 48380238 48380280 -118270016 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 6 954 331 339 49 81 chrX 48380280 48380527 -118269769 - B4 SINE B4 -53 239 1 6 954 181 128 0 41 chrX 48380680 48380729 -118269567 + T-rich Low_complexity Low_complexity 4 50 0 6 954 239 277 0 15 chrX 48381540 48381606 -118268690 + MER46C DNA MER2_type 264 328 -10 6 954 1157 90 44 17 chrX 48381937 48382118 -118268178 - B2_Mm2 SINE B2 -2 193 8 6 954 608 351 40 29 chrX 48382194 48382467 -118267829 - B4A SINE B4 -16 276 1 6 954 62 88 0 0 chrX 48382682 48382842 -118267454 + AT_rich Low_complexity Low_complexity 1 160 0 6 954 966 165 39 11 chrX 48383195 48383373 -118266923 + RMER19B LTR ERVK 375 557 -345 6 954 1019 241 58 27 chrX 48383388 48383682 -118266614 - RLTR11A LTR ERVK -11 517 215 6 954 484 360 39 0 chrX 48383683 48383886 -118266410 - Lx8 LINE L1 -153 7320 7110 6 954 1126 49 0 20 chrX 48383912 48384058 -118266238 + L1Md_F3 LINE L1 6428 6570 -14 6 954 235 239 45 9 chrX 48384066 48384173 -118266123 - Lx8 LINE L1 -663 7033 6936 6 954 718 81 0 0 chrX 48384185 48384284 -118266012 - L1_Mus2 LINE L1 0 6566 6468 6 954 494 265 59 8 chrX 48384331 48384449 -118265847 + RSINE1 SINE B4 3 126 -39 6 954 426 341 90 10 chrX 48384486 48384776 -118265520 + L1MC LINE L1 5371 5683 -2199 6 954 276 295 34 43 chrX 48384803 48384920 -118265376 - MLT1A1 LTR MaLR -285 123 8 6 954 3299 43 2 46 chrX 48384981 48385396 -118264900 - L1_Mus2 LINE L1 0 6566 6170 6 954 1619 304 115 19 chrX 48385449 48386428 -118263868 + L1_Mur3 LINE L1 2884 3959 -1921 6 954 4736 87 15 0 chrX 48386428 48387040 -118263256 + L1_Mus3 LINE L1 6012 6632 -6 6 954 26 0 0 0 chrX 48387062 48387088 -118263208 + AT_rich Low_complexity Low_complexity 1 26 0 6 954 937 303 22 26 chrX 48387088 48387356 -118262940 + B4A SINE B4 26 292 0 6 954 240 122 11 68 chrX 48387749 48387837 -118262459 + T-rich Low_complexity Low_complexity 3 85 0 6 954 492 286 32 0 chrX 48388015 48388141 -118262155 + B1F1 SINE Alu 1 130 -19 6 954 226 310 48 21 chrX 48388773 48388918 -118261378 + MIRc SINE MIR 82 230 -38 6 954 552 288 16 119 chrX 48389585 48389896 -118260400 + B4A SINE B4 1 279 -13 6 954 210 37 0 0 chrX 48389945 48389972 -118260324 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 6 954 234 0 0 0 chrX 48389973 48389999 -118260297 + (GA)n Simple_repeat Simple_repeat 2 27 0 6 954 960 57 0 0 chrX 48390018 48390141 -118260155 + (GGGGA)n Simple_repeat Simple_repeat 3 125 0 6 954 207 0 0 0 chrX 48390206 48390229 -118260067 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 954 306 0 0 0 chrX 48390229 48390262 -118260034 + (GA)n Simple_repeat Simple_repeat 2 35 0 6 954 333 0 0 0 chrX 48390441 48390478 -118259818 + (T)n Simple_repeat Simple_repeat 1 37 0 6 954 734 217 0 20 chrX 48390481 48390627 -118259669 - B1_Mus1 SINE Alu 0 148 6 6 954 197 347 90 32 chrX 48390824 48390979 -118259317 - L2b LINE L2 -1 3374 3211 6 954 2704 85 2 74 chrX 48391301 48391747 -118258549 - RLTR23 LTR ERV1 -16 414 1 6 954 807 278 106 16 chrX 48393277 48393588 -118256708 + Lx6 LINE L1 6029 6367 -683 6 954 1450 274 56 13 chrX 48393589 48394082 -118256214 + Lx6 LINE L1 6487 7375 -85 6 954 1022 144 0 6 chrX 48394182 48394363 -118255933 + (GGA)n Simple_repeat Simple_repeat 1 180 0 6 954 315 286 38 0 chrX 48394442 48394547 -118255749 + PB1D10 SINE Alu 9 117 0 6 954 279 71 0 0 chrX 48394684 48394726 -118255570 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 6 954 655 199 60 15 chrX 48394859 48394992 -118255304 + B1_Mur1 SINE Alu 3 141 -8 6 954 219 69 0 0 chrX 48395052 48395081 -118255215 + (GGGAGA)n Simple_repeat Simple_repeat 3 31 0 6 954 865 318 87 52 chrX 48395694 48395874 -118254422 + MLT1E2 LTR MaLR 5 205 -422 6 954 402 39 0 0 chrX 48395874 48395926 -118254370 + (GA)n Simple_repeat Simple_repeat 2 53 0 6 954 865 318 87 52 chrX 48395926 48396285 -118254011 + MLT1E2 LTR MaLR 206 562 -65 6 954 1013 244 14 0 chrX 48396298 48396507 -118253789 + B3 SINE B2 5 216 0 6 954 646 246 67 76 chrX 48398277 48398501 -118251795 + B4A SINE B4 3 224 -68 6 954 258 32 0 0 chrX 48398583 48398614 -118251682 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 954 380 236 61 35 chrX 48398642 48398735 -118251561 + MTD LTR MaLR 6 101 -320 6 954 2052 246 34 95 chrX 48398735 48398762 -118251534 - RMER19C LTR ERVK 0 611 595 6 954 1823 88 7 30 chrX 48398762 48399033 -118251263 - L1_Mus3 LINE L1 -7 6631 6367 6 954 2052 246 34 95 chrX 48399033 48399656 -118250640 - RMER19C LTR ERVK -17 594 1 6 954 1191 231 33 51 chrX 48399656 48399989 -118250307 + MTD LTR MaLR 93 419 0 6 954 1170 274 49 12 chrX 48400433 48400866 -118249430 - L1MA4 LINE L1 -1679 5965 5551 6 954 7500 100 11 8 chrX 48400871 48402269 -118248027 - Lx LINE L1 -6 6648 5245 6 954 1629 193 169 8 chrX 48402656 48403017 -118247279 - MTD LTR MaLR 0 419 1 6 954 423 302 11 99 chrX 48403057 48403248 -118247048 + B4A SINE B4 1 174 -118 6 954 567 43 0 0 chrX 48403384 48403454 -118246842 + (TC)n Simple_repeat Simple_repeat 1 70 0 6 954 599 311 18 41 chrX 48403500 48403721 -118246575 + B3 SINE B2 1 216 0 6 954 209 93 55 18 chrX 48404068 48404123 -118246173 + (TA)n Simple_repeat Simple_repeat 1 57 0 6 954 425 235 73 7 chrX 48404132 48404269 -118246027 - L1MA4 LINE L1 -368 5932 5787 6 954 235 219 117 54 chrX 48404440 48404551 -118245745 - PB1D7 SINE Alu -1 119 2 6 954 243 0 0 0 chrX 48405302 48405329 -118244967 + (TAAAAA)n Simple_repeat Simple_repeat 2 28 0 6 954 335 151 288 0 chrX 48405338 48405411 -118244885 + B3 SINE B2 2 95 -121 6 954 2025 192 196 29 chrX 48405484 48406010 -118244286 + RMER1B Other Other 45 658 -408 6 954 474 327 44 19 chrX 48406479 48406638 -118243658 + RSINE1 SINE B4 3 165 0 6 954 367 286 0 9 chrX 48406791 48406897 -118243399 + MLT1B LTR MaLR 27 131 -259 6 954 1355 172 92 0 chrX 48406897 48407159 -118243137 + MTC LTR MaLR 1 286 -135 6 954 668 306 38 0 chrX 48407188 48407371 -118242925 - Lx5 LINE L1 -307 6743 6554 6 954 1694 267 102 8 chrX 48407420 48407952 -118242344 - Lx5 LINE L1 -716 6334 5753 6 954 1518 276 61 26 chrX 48408321 48408927 -118241369 - L1MA8 LINE L1 -279 6012 5386 6 954 509 298 101 0 chrX 48409103 48409291 -118241005 + MER2 DNA MER2_type 119 325 -20 6 954 706 237 39 29 chrX 48409301 48409505 -118240791 - RMER15 LTR ERVL -13 562 357 6 954 196 307 45 38 chrX 48410897 48411029 -118239267 + L2 LINE L2 2304 2436 -983 6 954 261 0 0 0 chrX 48412318 48412347 -118237949 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 6 954 387 0 0 0 chrX 48413054 48413097 -118237199 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 954 281 298 125 42 chrX 48413112 48413166 -118237130 - MLT2C2 LTR ERVL -66 398 339 6 954 605 298 19 0 chrX 48413166 48413324 -118236972 + RSINE1 SINE B4 5 165 0 6 954 281 298 125 42 chrX 48413324 48413437 -118236859 - MLT2C2 LTR ERVL -126 338 217 6 954 426 39 0 0 chrX 48413813 48413865 -118236431 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 954 405 0 0 0 chrX 48413865 48413909 -118236387 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 954 345 100 0 0 chrX 48414188 48414238 -118236058 + (AGGGGG)n Simple_repeat Simple_repeat 3 52 0 6 954 216 97 0 0 chrX 48414690 48414721 -118235575 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 6 954 231 286 305 0 chrX 48414748 48414853 -118235443 - RSINE1 SINE B4 0 165 29 6 954 546 297 100 38 chrX 48415009 48415327 -118234969 - L1MEf LINE L1 -3526 2620 2278 6 954 273 57 0 0 chrX 48415327 48415362 -118234934 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 954 546 297 100 38 chrX 48415362 48415522 -118234774 - L1MEf LINE L1 -3869 2277 2113 6 954 1691 76 13 4 chrX 48415696 48415935 -118234361 - L1_Mus3 LINE L1 -6 6632 6392 6 954 317 276 62 23 chrX 48416150 48416280 -118234016 - L1MEf LINE L1 -4600 1642 1508 6 954 1681 246 53 53 chrX 48416290 48417030 -118233266 + L1MA6 LINE L1 5125 5881 -419 6 954 1927 62 4 34 chrX 48417528 48417795 -118232501 - L1Md_F2 LINE L1 0 6582 6324 6 954 228 204 18 18 chrX 48417842 48417897 -118232399 + CT-rich Low_complexity Low_complexity 1 55 0 6 954 1182 164 4 70 chrX 48418038 48418144 -118232152 - URR1A DNA MER1_type 0 226 122 6 954 1405 70 5 70 chrX 48418144 48418344 -118231952 - B2_Mm2 SINE B2 -8 187 1 6 954 1182 164 4 70 chrX 48418344 48418479 -118231817 - URR1A DNA MER1_type -105 121 1 6 954 495 0 0 0 chrX 48418518 48418573 -118231723 + (TC)n Simple_repeat Simple_repeat 2 56 0 6 954 393 171 172 0 chrX 48418601 48418685 -118231611 - B2_Mm2 SINE B2 -67 149 43 6 954 397 207 16 98 chrX 48418914 48419037 -118231259 - Lx4B LINE L1 -7 7051 6939 6 954 262 88 0 0 chrX 48419036 48419070 -118231226 + Lx4B LINE L1 6887 6920 -138 6 954 21 0 0 0 chrX 48419267 48419288 -118231008 + AT_rich Low_complexity Low_complexity 1 21 0 6 954 544 292 8 0 chrX 48419299 48419419 -118230877 - RSINE1 SINE B4 -16 149 29 6 954 565 239 0 0 chrX 48420403 48420512 -118229784 - Lx8 LINE L1 -565 6908 6800 6 954 404 228 13 0 chrX 48420673 48420752 -118229544 - ID4_ SINE ID -2 81 2 6 954 649 312 90 29 chrX 48420961 48421374 -118228922 - L1MEc LINE L1 -5919 481 44 6 954 3794 54 19 13 chrX 48421674 48422146 -118228150 + MT2C_Mm LTR ERVL 1 475 0 6 954 3824 64 3 74 chrX 48422290 48422860 -118227436 - L1_Mus2 LINE L1 0 6566 6037 7 954 1686 164 86 32 chrX 48423091 48423463 -118226833 - ORR1B1 LTR MaLR -2 392 1 7 954 737 264 20 20 chrX 48424121 48424318 -118225978 - B3 SINE B2 -19 197 1 7 954 215 261 0 0 chrX 48424335 48424381 -118225915 - RSINE1 SINE B4 -56 109 64 7 954 185 293 103 0 chrX 48424433 48424491 -118225805 + MIR SINE MIR 81 144 -64 7 954 1025 272 83 32 chrX 48424517 48424889 -118225407 + MTC LTR MaLR 17 407 -14 7 954 3525 25 2 0 chrX 48425074 48425469 -118224827 + MTA_Mm LTR MaLR 1 396 0 7 954 298 57 19 19 chrX 48425552 48425606 -118224690 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 7 954 324 0 0 0 chrX 48426442 48426478 -118223818 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 954 765 31 0 0 chrX 48426853 48426949 -118223347 + (TG)n Simple_repeat Simple_repeat 1 96 0 7 954 365 267 64 37 chrX 48427775 48427884 -118222412 - B1F SINE Alu 0 149 38 7 954 233 89 0 22 chrX 48427895 48427941 -118222355 + (TTTG)n Simple_repeat Simple_repeat 4 48 0 7 954 634 81 0 0 chrX 48427941 48428028 -118222268 - B1_Mus2 SINE Alu 0 147 61 7 954 1090 83 7 0 chrX 48428033 48428177 -118222119 - B1_Mm SINE Alu 0 147 3 7 954 443 301 68 33 chrX 48428751 48429119 -118221177 - L1MEc LINE L1 -4345 2055 1675 7 954 480 281 41 79 chrX 48429143 48429262 -118221034 - L1MEc LINE L1 -4840 1560 1452 7 954 902 228 111 55 chrX 48429262 48429624 -118220672 + RLTR14 LTR ERV1 1 382 0 7 954 480 281 41 79 chrX 48429624 48429844 -118220452 - L1MEc LINE L1 -4949 1451 1234 7 954 243 0 0 0 chrX 48429881 48429908 -118220388 + (CAT)n Simple_repeat Simple_repeat 1 27 0 7 954 519 259 36 29 chrX 48430081 48430220 -118220076 - B3 SINE B2 -47 169 30 7 954 404 308 125 7 chrX 48430866 48430894 -118219402 - RSINE1 SINE B4 -2 163 125 7 954 669 103 0 0 chrX 48430894 48431011 -118219285 + (TG)n Simple_repeat Simple_repeat 2 118 0 7 954 404 308 125 7 chrX 48431011 48431126 -118219170 - RSINE1 SINE B4 -41 124 3 7 954 555 90 0 0 chrX 48431279 48431357 -118218939 + (TTCC)n Simple_repeat Simple_repeat 4 81 0 7 954 591 112 0 0 chrX 48431353 48431442 -118218854 + (TCC)n Simple_repeat Simple_repeat 2 90 0 7 954 363 342 9 0 chrX 48431443 48431557 -118218739 - B1_Mur1 SINE Alu 0 149 35 7 954 1168 55 0 0 chrX 48431666 48431812 -118218484 - B1_Mm SINE Alu 0 147 2 7 954 335 217 0 0 chrX 48431930 48431999 -118218297 - ID4 SINE ID 0 83 15 7 954 323 336 18 9 chrX 48432125 48432236 -118218060 - PB1D10 SINE Alu -5 112 1 7 954 230 291 40 113 chrX 48432642 48432766 -118217530 + L2b LINE L2 3247 3361 -14 7 954 358 318 0 0 chrX 48433313 48433401 -118216895 + ID SINE ID 1 88 -136 7 954 253 336 110 59 chrX 48433633 48433769 -118216527 - MLT1A0 LTR MaLR -170 195 53 7 954 1061 221 10 5 chrX 48433919 48434128 -118216168 + B3 SINE B2 1 210 -6 7 954 342 0 0 0 chrX 48434338 48434376 -118215920 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 954 450 322 49 10 chrX 48434582 48434786 -118215510 - MER20 DNA MER1_type -1 218 7 7 954 196 53 0 50 chrX 48435088 48435128 -118215168 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 7 954 211 158 0 50 chrX 48435141 48435181 -118215115 - PB1D10 SINE Alu -7 110 73 7 954 1306 234 184 52 chrX 48435216 48435717 -118214579 - RMER2 LTR ERV1 0 567 1 7 954 510 139 0 0 chrX 48436005 48436091 -118214205 + (TG)n Simple_repeat Simple_repeat 2 87 0 7 954 470 220 16 68 chrX 48436375 48436520 -118213776 + B1_Mur1 SINE Alu 2 148 -1 7 954 231 378 0 0 chrX 48437753 48437835 -118212461 + ID4_ SINE ID 2 83 0 7 954 21 0 0 0 chrX 48438204 48438225 -118212071 + AT_rich Low_complexity Low_complexity 1 21 0 7 954 271 326 21 70 chrX 48438797 48438939 -118211357 - RSINE1 SINE B4 -2 163 29 7 954 567 316 13 54 chrX 48438958 48439182 -118211114 - B3 SINE B2 -1 215 1 7 954 25 0 0 0 chrX 48439921 48439946 -118210350 + AT_rich Low_complexity Low_complexity 1 25 0 7 954 816 245 0 36 chrX 48439955 48440150 -118210146 - B3 SINE B2 -28 188 1 7 954 207 0 0 0 chrX 48440990 48441013 -118209283 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 954 648 292 122 42 chrX 48441103 48441672 -118208624 - L1ME1 LINE L1 -30 6149 5532 7 954 587 131 8 32 chrX 48441719 48441845 -118208451 + CT-rich Low_complexity Low_complexity 2 124 0 7 954 815 182 29 0 chrX 48441857 48441994 -118208302 - B1_Mur1 SINE Alu -8 141 1 7 954 321 314 113 9 chrX 48442324 48442536 -118207760 + MIR SINE MIR 2 235 -27 7 954 6133 112 64 12 chrX 48443141 48444122 -118206174 + Lx4A LINE L1 6027 7058 0 7 954 4071 126 10 62 chrX 48444175 48444868 -118205428 + Lx3A LINE L1 6316 6972 -9 7 954 25 0 0 0 chrX 48444877 48444902 -118205394 + AT_rich Low_complexity Low_complexity 1 25 0 7 954 855 242 14 14 chrX 48445255 48445465 -118204831 - B3 SINE B2 -2 214 5 7 954 285 326 45 0 chrX 48445607 48445696 -118204600 - ID_B1 SINE B4 0 224 132 7 954 714 239 28 38 chrX 48445801 48446014 -118204282 - B3 SINE B2 -5 211 1 7 954 346 356 62 6 chrX 48446370 48446423 -118203873 + ID SINE ID 7 58 -166 7 954 225 0 0 0 chrX 48446423 48446448 -118203848 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 7 954 346 356 62 6 chrX 48446448 48446555 -118203741 + ID_B1 SINE B4 59 175 -49 7 954 393 311 28 0 chrX 48446469 48446575 -118203721 + PB1D10 SINE Alu 9 117 0 7 954 180 0 0 0 chrX 48446813 48446833 -118203463 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 954 564 15 0 0 chrX 48446833 48446897 -118203399 + (GA)n Simple_repeat Simple_repeat 1 65 0 7 954 192 77 0 0 chrX 48446934 48446960 -118203336 + (T)n Simple_repeat Simple_repeat 1 26 0 7 954 228 298 39 78 chrX 48447129 48447231 -118203065 + MLT1L LTR MaLR 296 393 -217 7 954 322 329 79 68 chrX 48447419 48447776 -118202520 + MLT1K-int LTR MaLR 724 1124 -263 7 954 349 320 0 10 chrX 48448286 48448387 -118201909 + MLT1K LTR MaLR 208 307 -288 7 954 278 326 21 11 chrX 48448531 48448624 -118201672 - ID_B1 SINE B4 -128 96 3 7 954 216 0 0 0 chrX 48448913 48448937 -118201359 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 7 954 8583 8 0 0 chrX 48449224 48450455 -118199841 - L1Md_T LINE L1 0 6582 5352 7 954 1156 285 51 47 chrX 48450585 48451289 -118199007 - L1MB3 LINE L1 -93 6090 5397 7 954 1076 78 42 0 chrX 48451289 48451431 -118198865 - B1_Mus1 SINE Alu 0 148 1 7 954 1032 295 50 67 chrX 48451431 48451521 -118198775 - L1MB3 LINE L1 -784 5396 5308 7 954 248 349 61 0 chrX 48451636 48451702 -118198594 - RSINE1 SINE B4 -2 163 94 7 954 280 268 136 23 chrX 48452173 48452261 -118198035 - ID_B1 SINE B4 -11 213 116 7 954 270 304 14 0 chrX 48452718 48452787 -118197509 + PB1D10 SINE Alu 33 102 -15 7 954 1319 96 27 0 chrX 48452916 48453104 -118197192 + B2_Mm2 SINE B2 2 194 -1 7 954 599 237 144 40 chrX 48453200 48453266 -118197030 + L1MA7 LINE L1 5980 6052 -239 7 954 1165 43 0 0 chrX 48453266 48453404 -118196892 + B1_Mus1 SINE Alu 1 138 -10 7 954 218 56 28 0 chrX 48453404 48453440 -118196856 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 7 954 599 237 144 40 chrX 48453440 48453649 -118196647 + L1MA7 LINE L1 6053 6284 -7 7 954 2277 120 67 24 chrX 48453794 48454170 -118196126 + RLTR12A LTR ERVK 3 394 -174 7 954 207 125 0 0 chrX 48454312 48454352 -118195944 + (GAAA)n Simple_repeat Simple_repeat 3 42 0 7 954 455 283 101 68 chrX 48454581 48454602 -118195694 + ID SINE ID 63 88 -204 7 954 363 271 123 36 chrX 48454602 48454740 -118195556 + B1_Mur4 SINE Alu 1 150 0 7 954 631 256 69 0 chrX 48454986 48455146 -118195150 + MER5A DNA MER1_type 1 171 -18 7 954 260 304 21 32 chrX 48455405 48455500 -118194796 - B1_Mm SINE Alu -20 127 34 7 954 684 230 129 12 chrX 48455415 48455578 -118194718 - ID_B1 SINE B4 -23 201 20 7 954 327 328 0 17 chrX 48455598 48455716 -118194580 - PB1D10 SINE Alu 0 117 2 7 954 776 203 27 27 chrX 48456086 48456273 -118194023 + MER31A LTR ERV1 148 334 -151 7 954 243 333 27 21 chrX 48456723 48456910 -118193386 + L1M2a LINE L1 1959 2146 -5022 7 954 195 204 0 0 chrX 48457037 48457081 -118193215 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 954 874 320 108 44 chrX 48457096 48458222 -118192074 + L1_Mur3 LINE L1 1351 2573 -3274 7 954 234 0 0 0 chrX 48458222 48458248 -118192048 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 7 954 874 319 104 44 chrX 48458248 48458422 -118191874 + L1_Mur3 LINE L1 2556 2734 -3146 7 954 610 184 144 0 chrX 48458440 48458614 -118191682 + Lx9 LINE L1 7423 7621 -23 7 954 7801 45 1 3 chrX 48458616 48460166 -118190130 - L1Md_F2 LINE L1 0 6582 5036 7 954 5967 54 0 0 chrX 48460165 48460946 -118189350 + L1Md_F2 LINE L1 4266 5046 -837 7 954 236 216 108 40 chrX 48461003 48461151 -118189145 + L1MD LINE L1 2772 2933 -2914 7 954 251 191 15 0 chrX 48461151 48461219 -118189077 + GA-rich Low_complexity Low_complexity 1 69 0 7 954 1748 239 18 5 chrX 48461292 48461692 -118188604 - Lx6 LINE L1 -2 7458 7054 7 954 296 284 39 12 chrX 48461709 48461965 -118188331 + L1M2 LINE L1 3068 3330 -2813 7 954 4114 127 8 0 chrX 48461971 48462587 -118187709 + Lx3B LINE L1 6352 6972 -1 7 954 553 281 16 0 chrX 48462821 48462942 -118187354 - RSINE1 SINE B4 -12 153 31 7 954 2526 68 0 0 chrX 48464640 48464964 -118185332 - L1_Mus1 LINE L1 -1 6566 6243 7 954 1748 43 69 4 chrX 48464994 48465226 -118185070 - L1_Mus2 LINE L1 0 6566 6320 7 954 278 246 33 0 chrX 48467926 48467987 -118182309 + ID2 SINE ID 21 83 0 7 954 356 206 12 34 chrX 48468293 48468417 -118181879 - ID4 SINE ID -23 129 14 7 954 465 19 0 0 chrX 48468935 48468989 -118181307 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 954 225 0 0 0 chrX 48469283 48469308 -118180988 + (A)n Simple_repeat Simple_repeat 1 25 0 8 954 769 197 0 13 chrX 48475512 48475661 -118174635 + B1_Mus2 SINE Alu 1 147 0 8 954 198 0 0 0 chrX 48475707 48475729 -118174567 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 8 954 26 0 0 0 chrX 48476833 48476859 -118173437 + AT_rich Low_complexity Low_complexity 1 26 0 8 954 243 0 0 0 chrX 48477407 48477434 -118172862 + (TA)n Simple_repeat Simple_repeat 2 28 0 8 954 26 50 0 0 chrX 48478974 48479014 -118171282 + AT_rich Low_complexity Low_complexity 1 40 0 8 954 213 39 0 0 chrX 48479700 48479726 -118170570 + (TTG)n Simple_repeat Simple_repeat 2 27 0 8 954 5591 71 11 1 chrX 48479729 48480464 -118169832 + Lx3_Mus LINE L1 6268 7009 0 8 954 318 148 0 0 chrX 48480697 48480751 -118169545 + (TA)n Simple_repeat Simple_repeat 1 54 0 8 954 284 362 12 0 chrX 48481534 48481614 -118168682 - ID4 SINE ID -2 81 1 8 954 39 68 0 0 chrX 48484931 48485005 -118165291 + AT_rich Low_complexity Low_complexity 1 74 0 8 954 246 211 0 50 chrX 48485005 48485085 -118165211 - Lx9 LINE L1 -56 7588 7513 8 954 432 0 0 0 chrX 48485265 48485313 -118164983 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 954 36 0 0 0 chrX 48486851 48486887 -118163409 + AT_rich Low_complexity Low_complexity 1 36 0 8 954 274 254 32 0 chrX 48487637 48487700 -118162596 - ID4_ SINE ID -11 72 8 8 954 1025 96 7 0 chrX 48487718 48487864 -118162432 - B1_Mus2 SINE Alu 0 147 1 8 954 349 230 0 13 chrX 48487867 48487942 -118162354 - RMER30 DNA MER1_type -121 81 8 8 954 656 70 70 0 chrX 48487953 48488053 -118162243 + B1_Mus2 SINE Alu 41 147 0 8 954 306 0 0 0 chrX 48488053 48488087 -118162209 + (A)n Simple_repeat Simple_repeat 1 34 0 8 954 24 53 0 0 chrX 48488178 48488216 -118162080 + AT_rich Low_complexity Low_complexity 1 38 0 8 954 372 231 37 0 chrX 48488441 48488549 -118161747 - L1M1 LINE L1 -527 5773 5662 8 954 349 223 26 9 chrX 48488611 48488724 -118161572 + L1MA5 LINE L1 6182 6296 -4 8 954 23 33 0 0 chrX 48490048 48490078 -118160218 + AT_rich Low_complexity Low_complexity 1 30 0 8 954 1462 36 10 0 chrX 48491954 48492149 -118158147 + Lx3_Mus LINE L1 6810 7006 -3 8 954 314 330 18 23 chrX 48492642 48492773 -118157523 - MIRb SINE MIR -50 212 80 8 954 451 277 27 0 chrX 48493269 48493381 -118156915 + PB1D7 SINE Alu 1 115 -5 8 954 28 48 0 0 chrX 48493953 48493995 -118156301 + AT_rich Low_complexity Low_complexity 1 42 0 8 954 24 67 0 0 chrX 48494102 48494147 -118156149 + AT_rich Low_complexity Low_complexity 1 45 0 8 955 249 296 144 28 chrX 48497760 48497941 -118152355 + L2c LINE L2 3135 3336 -51 8 955 198 0 0 0 chrX 48499716 48499738 -118150558 + (T)n Simple_repeat Simple_repeat 1 22 0 8 955 378 143 0 0 chrX 48500012 48500075 -118150221 + (T)n Simple_repeat Simple_repeat 1 63 0 1 955 1077 50 0 0 chrX 48500075 48500214 -118150082 - B1_Mus2 SINE Alu 0 147 9 2 955 885 139 0 0 chrX 48500405 48500534 -118149762 + B3 SINE B2 2 130 -86 3 955 1117 203 34 0 chrX 48500596 48500803 -118149493 + B3 SINE B2 1 214 -2 4 955 369 256 74 33 chrX 48503913 48504034 -118146262 - PB1D10 SINE Alu -1 126 1 5 955 341 324 84 21 chrX 48504653 48504795 -118145501 - MER5A DNA MER1_type -7 182 32 6 955 491 329 7 7 chrX 48505446 48505599 -118144697 + B4A SINE B4 132 284 -8 7 955 207 189 0 0 chrX 48506765 48506802 -118143494 + (TCTG)n Simple_repeat Simple_repeat 4 40 0 8 955 258 316 68 26 chrX 48506813 48506930 -118143366 - PB1 SINE Alu -5 122 1 9 955 375 299 9 0 chrX 48507810 48507917 -118142379 - PB1D10 SINE Alu -7 110 3 1 955 315 0 0 0 chrX 48507930 48507965 -118142331 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 955 510 275 61 0 chrX 48508109 48508240 -118142056 - B4A SINE B4 -141 151 13 1 955 933 236 58 15 chrX 48508277 48508483 -118141813 - B3 SINE B2 -1 215 1 1 955 435 19 0 0 chrX 48508724 48508776 -118141520 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 955 258 254 16 0 chrX 48508839 48508902 -118141394 - B4A SINE B4 -205 87 24 1 955 345 213 33 0 chrX 48508851 48508912 -118141384 - ID4 SINE ID -10 73 11 1 955 886 118 6 24 chrX 48509893 48510058 -118140238 + Lx LINE L1 6491 6652 -2 1 955 502 206 19 0 chrX 48510837 48510944 -118139352 + PB1D9 SINE Alu 3 111 -9 1 955 23 0 0 0 chrX 48510962 48510985 -118139311 + AT_rich Low_complexity Low_complexity 1 23 0 1 955 222 302 29 41 chrX 48512207 48512330 -118137966 + MIR3 SINE MIR 51 170 -38 2 955 488 240 13 27 chrX 48512472 48512622 -118137674 + L1MC4a LINE L1 7733 7880 -2 2 955 241 308 64 0 chrX 48512935 48513013 -118137283 - ID4 SINE ID 0 83 1 2 955 21 36 0 0 chrX 48513118 48513146 -118137150 + AT_rich Low_complexity Low_complexity 1 28 0 2 955 236 204 20 0 chrX 48513896 48513945 -118136351 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 955 24 21 0 60 chrX 48514275 48514325 -118135971 + AT_rich Low_complexity Low_complexity 1 47 0 2 955 727 204 0 14 chrX 48515161 48515305 -118134991 - B1_Mur1 SINE Alu -6 143 2 2 955 21 36 0 0 chrX 48515626 48515654 -118134642 + AT_rich Low_complexity Low_complexity 1 28 0 2 955 3565 43 0 5 chrX 48515809 48516252 -118134044 + L1Md_F2 LINE L1 6140 6580 -2 2 955 952 250 0 5 chrX 48516913 48517110 -118133186 + B3 SINE B2 2 197 -19 2 955 594 286 0 0 chrX 48517197 48517330 -118132966 + B1F2 SINE Alu 7 139 -10 3 955 450 260 50 0 chrX 48520020 48520120 -118130176 - B1_Mur2 SINE Alu -43 106 2 3 955 225 250 0 16 chrX 48520121 48520182 -118130114 + L1MB8 LINE L1 6112 6171 -7 3 955 251 359 22 0 chrX 48521216 48521308 -118128988 - MIRc SINE MIR -131 137 44 3 955 466 273 56 9 chrX 48521793 48521942 -118128354 - MIR SINE MIR -99 177 15 3 955 21 57 0 0 chrX 48523330 48523365 -118126931 + AT_rich Low_complexity Low_complexity 1 35 0 3 955 24 53 0 0 chrX 48523564 48523602 -118126694 + AT_rich Low_complexity Low_complexity 1 38 0 3 955 298 302 83 50 chrX 48524682 48524863 -118125433 - B3A SINE B2 -11 187 1 3 955 278 221 14 14 chrX 48524946 48525015 -118125281 + ID4_ SINE ID 2 70 -13 3 955 342 91 0 0 chrX 48525522 48525577 -118124719 + (CAA)n Simple_repeat Simple_repeat 3 57 0 3 955 682 305 54 25 chrX 48526012 48526288 -118124008 + B4A SINE B4 5 288 -4 4 955 745 224 77 20 chrX 48527157 48527353 -118122943 + B3 SINE B2 4 210 -6 4 955 659 241 14 7 chrX 48527977 48528113 -118122183 + B1_Mur1 SINE Alu 2 138 -11 4 955 824 77 0 8 chrX 48528113 48528231 -118122065 + (GAGAA)n Simple_repeat Simple_repeat 4 120 0 4 955 1102 174 1 79 chrX 48528365 48528640 -118121656 + L1_Mur1 LINE L1 4667 4945 -1201 4 955 270 0 0 0 chrX 48529139 48529169 -118121127 + (TAA)n Simple_repeat Simple_repeat 2 31 0 4 955 330 171 0 0 chrX 48529936 48530006 -118120290 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 955 21 36 0 0 chrX 48530866 48530894 -118119402 + AT_rich Low_complexity Low_complexity 1 28 0 4 955 21 0 0 0 chrX 48530982 48531003 -118119293 + AT_rich Low_complexity Low_complexity 1 21 0 4 955 389 359 56 14 chrX 48531090 48531305 -118118991 + MIR SINE MIR 2 225 -37 4 955 22 0 0 0 chrX 48531338 48531360 -118118936 + AT_rich Low_complexity Low_complexity 1 22 0 5 955 209 200 0 0 chrX 48531711 48531746 -118118550 + (CATATA)n Simple_repeat Simple_repeat 5 39 0 5 955 1271 272 66 49 chrX 48531746 48532484 -118117812 - L1MA5 LINE L1 -372 5928 5137 5 955 1084 69 4 21 chrX 48533939 48534178 -118116118 + (TG)n Simple_repeat Simple_repeat 1 234 0 5 955 267 222 0 0 chrX 48534512 48534566 -118115730 - ID4_ SINE ID -29 54 1 5 955 995 255 25 47 chrX 48535049 48535411 -118114885 + L1MA4 LINE L1 5578 5931 -369 5 955 235 377 8 42 chrX 48535852 48535971 -118114325 + ID_B1 SINE B4 84 198 -26 5 955 306 0 0 0 chrX 48536085 48536119 -118114177 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 955 266 266 47 0 chrX 48537302 48537366 -118112930 + MamRep38 DNA hAT 1 67 -228 5 955 542 336 77 18 chrX 48538782 48539003 -118111293 - MIR SINE MIR -27 235 2 5 955 1505 57 5 10 chrX 48539155 48539349 -118110947 + B2_Mm1t SINE B2 1 193 0 6 955 459 305 95 28 chrX 48540056 48540373 -118109923 - L1MB8 LINE L1 -8 6170 5833 6 955 249 308 179 0 chrX 48540426 48540504 -118109792 - B1F SINE Alu -56 93 2 6 955 416 235 40 10 chrX 48540763 48540862 -118109434 + B1_Mur1 SINE Alu 48 149 0 6 955 1080 220 5 0 chrX 48540870 48541079 -118109217 + B3 SINE B2 3 212 -4 6 955 328 39 0 0 chrX 48541319 48541370 -118108926 - L1_Mus4 LINE L1 -7 6629 6579 6 955 1186 41 7 0 chrX 48541427 48541572 -118108724 - B1_Mus2 SINE Alu 0 147 2 6 955 307 371 17 0 chrX 48541778 48541894 -118108402 + MIRb SINE MIR 133 250 -18 6 955 441 0 0 0 chrX 48543384 48543433 -118106863 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 955 21 0 0 0 chrX 48543538 48543559 -118106737 + AT_rich Low_complexity Low_complexity 1 21 0 6 955 600 54 0 31 chrX 48544395 48544491 -118105805 + (TA)n Simple_repeat Simple_repeat 2 94 0 7 955 795 211 78 66 chrX 48544585 48544905 -118105391 + Lx9 LINE L1 5786 6109 -1535 7 955 1723 238 79 5 chrX 48545034 48545478 -118104818 + Lx9 LINE L1 6753 7229 -415 7 955 242 256 23 47 chrX 48545477 48545563 -118104733 + Lx9 LINE L1 7394 7477 -167 7 955 28 0 0 0 chrX 48545615 48545643 -118104653 + AT_rich Low_complexity Low_complexity 1 28 0 7 955 271 286 0 0 chrX 48545773 48545829 -118104467 + PB1D7 SINE Alu 5 60 -60 7 955 266 258 0 31 chrX 48546024 48546088 -118104208 + L2b LINE L2 3313 3374 -1 7 955 183 184 0 0 chrX 48546531 48546569 -118103727 + T-rich Low_complexity Low_complexity 3 40 0 7 955 228 333 0 27 chrX 48548283 48548357 -118101939 - Charlie9 DNA MER1_type -4 2753 2682 7 955 339 296 172 39 chrX 48548692 48548977 -118101319 + MamRep434 DNA TcMar 18 340 -86 7 955 660 181 103 0 chrX 48551387 48551503 -118098793 + B1_Mur4 SINE Alu 15 142 -8 7 955 403 283 6 44 chrX 48552369 48552557 -118097739 - B3A SINE B2 -10 183 4 7 955 342 0 0 0 chrX 48552640 48552678 -118097618 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 955 419 330 0 0 chrX 48554071 48554180 -118096116 + PB1 SINE Alu 1 109 -18 8 955 23 33 0 0 chrX 48554236 48554266 -118096030 + AT_rich Low_complexity Low_complexity 1 30 0 8 955 374 200 133 0 chrX 48555149 48555239 -118095057 + PB1D10 SINE Alu 13 114 -3 8 955 21 0 0 0 chrX 48556790 48556811 -118093485 + AT_rich Low_complexity Low_complexity 1 21 0 8 955 243 271 20 30 chrX 48557614 48557713 -118092583 + A-rich Low_complexity Low_complexity 2 99 0 8 955 207 0 0 0 chrX 48557959 48557982 -118092314 + (A)n Simple_repeat Simple_repeat 1 23 0 8 955 211 103 24 49 chrX 48558238 48558279 -118092017 + C-rich Low_complexity Low_complexity 6 45 0 8 955 219 152 0 0 chrX 48558472 48558518 -118091778 + (CGGG)n Simple_repeat Simple_repeat 4 49 0 8 955 222 242 0 70 chrX 48558827 48558956 -118091340 + (CCCCG)n Simple_repeat Simple_repeat 3 122 0 8 955 224 208 0 20 chrX 48558892 48558941 -118091355 + (CCG)n Simple_repeat Simple_repeat 2 49 0 9 955 23 33 0 0 chrX 48562308 48562338 -118087958 + AT_rich Low_complexity Low_complexity 1 30 0 9 955 306 0 0 0 chrX 48562431 48562465 -118087831 + (TCTA)n Simple_repeat Simple_repeat 4 37 0 9 955 581 179 95 24 chrX 48562465 48562591 -118087705 - B1_Mus2 SINE Alu 0 147 13 9 955 264 59 0 0 chrX 48562635 48562669 -118087627 + (ATG)n Simple_repeat Simple_repeat 2 35 0 9 955 328 280 19 48 chrX 48563016 48563121 -118087175 - PB1D10 SINE Alu -1 116 15 9 955 837 232 41 0 chrX 48563810 48564004 -118086292 - B3 SINE B2 0 216 15 9 955 497 282 13 53 chrX 48564098 48564248 -118086048 - B1_Mur1 SINE Alu -5 144 1 9 955 281 341 35 41 chrX 48564524 48564695 -118085601 + MIRb SINE MIR 76 245 -23 9 955 311 264 44 0 chrX 48565298 48565389 -118084907 - ORR1B2 LTR MaLR 0 384 290 9 955 215 61 30 0 chrX 48565391 48565424 -118084872 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 1 955 342 232 13 168 chrX 48566138 48566293 -118084003 - ORR1B2 LTR MaLR -198 169 39 9 955 1543 85 28 0 chrX 48566327 48566538 -118083758 - L1_Mus2 LINE L1 0 6566 6350 1 955 264 294 103 47 chrX 48566924 48567031 -118083265 + MIR SINE MIR 12 124 -138 1 955 886 244 123 71 chrX 48567088 48567494 -118082802 + RMER13A LTR ERVK 34 460 -400 1 955 187 324 54 0 chrX 48567845 48567919 -118082377 + MIR SINE MIR 139 216 -46 1 955 192 316 0 60 chrX 48567957 48568041 -118082255 - MIRc SINE MIR -169 99 21 1 955 288 260 0 27 chrX 48568858 48568933 -118081363 + LFSINE_Vert SINE SINE 136 208 -251 1 955 1281 204 96 36 chrX 48569497 48569832 -118080464 + ORR1D2 LTR MaLR 13 367 -3 1 955 252 284 15 0 chrX 48570888 48570955 -118079341 - ID4 SINE ID -6 77 10 1 955 1382 77 5 58 chrX 48571722 48571930 -118078366 - L1_Mus2 LINE L1 0 6566 6370 1 955 252 211 68 27 chrX 48573555 48573628 -118076668 + ID4 SINE ID 5 80 -3 1 955 584 14 0 14 chrX 48573763 48573837 -118076459 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 955 473 270 20 74 chrX 48573864 48574012 -118076284 - RSINE1 SINE B4 -24 141 2 1 955 355 232 50 10 chrX 48574355 48574455 -118075841 - MTEb LTR MaLR -4 375 272 1 955 355 286 162 36 chrX 48574838 48575085 -118075211 + MARNA DNA Mariner 134 411 -175 1 955 272 269 0 0 chrX 48575286 48575353 -118074943 + tRNA-Ala-GCY_ tRNA tRNA 1 67 -8 1 955 238 316 92 0 chrX 48575441 48575539 -118074757 + PB1D9 SINE Alu 1 107 -13 1 955 1199 283 73 33 chrX 48577134 48577616 -118072680 - Lx8 LINE L1 -6 7467 6967 1 955 553 276 99 110 chrX 48577700 48578437 -118071859 + L1M4 LINE L1 2286 3014 -3132 1 955 611 152 310 0 chrX 48578491 48578636 -118071660 + Lx4A LINE L1 6869 7058 0 1 955 848 236 11 6 chrX 48578647 48578830 -118071466 + B3 SINE B2 31 214 -2 1 955 786 147 73 7 chrX 48578852 48578989 -118071307 + B1_Mus1 SINE Alu 1 146 -2 1 955 243 261 138 20 chrX 48578995 48579050 -118071246 + L1M4 LINE L1 3029 3090 -3056 1 955 267 31 0 0 chrX 48579050 48579082 -118071214 + (TAA)n Simple_repeat Simple_repeat 2 33 0 1 955 243 261 138 20 chrX 48579082 48579272 -118071024 + L1M4 LINE L1 3091 3302 -2844 1 955 924 93 0 0 chrX 48579431 48579560 -118070736 - B1_Mus2 SINE Alu -9 138 10 1 955 21 0 0 0 chrX 48579561 48579582 -118070714 + AT_rich Low_complexity Low_complexity 1 21 0 1 955 30 59 0 0 chrX 48579686 48579737 -118070559 + AT_rich Low_complexity Low_complexity 1 51 0 1 955 579 316 133 54 chrX 48579889 48580334 -118069962 - MLT1D LTR MaLR -3 502 23 1 955 480 205 0 0 chrX 48580460 48580631 -118069665 + GA-rich Low_complexity Low_complexity 1 171 0 1 955 2064 226 30 7 chrX 48580635 48581040 -118069256 + Lx6 LINE L1 6887 7300 -160 1 955 348 156 0 32 chrX 48581047 48581140 -118069156 + CT-rich Low_complexity Low_complexity 2 91 0 1 955 466 152 13 0 chrX 48581150 48581229 -118069067 - B1_Mur3 SINE Alu -17 132 53 1 955 658 190 20 53 chrX 48581229 48581379 -118068917 + Lx6 LINE L1 7305 7449 -11 1 955 211 373 0 0 chrX 48581633 48581708 -118068588 - RSINE1 SINE B4 -37 128 54 1 955 719 275 7 43 chrX 48582175 48582452 -118067844 + L1MC4 LINE L1 6300 6566 -1316 1 955 321 271 73 0 chrX 48582462 48582558 -118067738 + ID_B1 SINE B4 116 218 -6 1 955 378 0 0 0 chrX 48582563 48582605 -118067691 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 955 677 92 8 0 chrX 48582605 48582725 -118067571 + (GA)n Simple_repeat Simple_repeat 1 121 0 1 955 851 294 98 17 chrX 48582726 48583072 -118067224 + L1MC4 LINE L1 6703 7076 -966 1 955 478 250 29 0 chrX 48583115 48583251 -118067045 - L1MC4a LINE L1 -1331 6551 6412 1 955 432 329 46 29 chrX 48583240 48583344 -118066952 + L1MC4 LINE L1 7121 7232 -810 1 955 1911 181 53 39 chrX 48583344 48583757 -118066539 + MTD LTR MaLR 1 419 0 1 955 432 329 46 29 chrX 48583757 48583893 -118066403 + L1MC4 LINE L1 7233 7365 -677 1 955 33 0 0 0 chrX 48583962 48583995 -118066301 + AT_rich Low_complexity Low_complexity 1 33 0 1 955 1160 101 6 0 chrX 48583997 48584175 -118066121 + (TC)n Simple_repeat Simple_repeat 2 180 0 1 955 635 243 58 29 chrX 48584176 48584338 -118065958 - RSINE1 SINE B4 0 165 1 1 955 402 252 154 32 chrX 48584343 48584466 -118065830 - B1_Mur3 SINE Alu -9 140 3 1 955 2152 129 11 42 chrX 48584493 48584874 -118065422 - Lx3B LINE L1 0 6973 6605 1 955 1940 89 27 4 chrX 48584876 48585135 -118065161 + Lx3A LINE L1 6310 6574 -407 1 955 888 274 114 45 chrX 48585225 48585584 -118064712 - Lx8 LINE L1 0 7473 7090 1 955 333 0 0 0 chrX 48586430 48586467 -118063829 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 1 955 686 206 21 102 chrX 48586467 48586802 -118063494 - Lx4B LINE L1 -21 7037 6650 1 955 3599 178 55 49 chrX 48586802 48587577 -118062719 + Lx4B LINE L1 5901 6641 -417 1 955 319 274 0 0 chrX 48587578 48587662 -118062634 + PB1D10 SINE Alu 24 107 -10 1 955 299 241 70 26 chrX 48587963 48588078 -118062218 - Lx7 LINE L1 0 7696 7577 1 955 1679 280 32 37 chrX 48588155 48588716 -118061580 - Lx7 LINE L1 -366 7330 6773 1 955 702 250 0 0 chrX 48588726 48588870 -118061426 - B1_Mur1 SINE Alu -5 144 1 1 955 314 204 129 0 chrX 48589090 48589183 -118061113 - L1M4b LINE L1 -7193 141 37 1 955 252 105 67 34 chrX 48589336 48589425 -118060871 + A-rich Low_complexity Low_complexity 4 95 0 1 955 450 53 0 0 chrX 48590568 48590625 -118059671 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 955 383 234 159 30 chrX 48590703 48590835 -118059461 - MIR SINE MIR -37 225 77 1 955 298 272 33 0 chrX 48591159 48591255 -118059041 + PB1D10 SINE Alu 1 102 -18 1 955 495 175 125 10 chrX 48591838 48591942 -118058354 + PB1D9 SINE Alu 5 120 0 1 955 182 33 0 62 chrX 48591942 48591974 -118058322 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 1 955 242 143 0 16 chrX 48593012 48593076 -118057220 + T-rich Low_complexity Low_complexity 4 66 0 1 955 333 224 0 0 chrX 48593711 48593785 -118056511 + ID4_ SINE ID 9 82 -70 1 955 4288 182 20 26 chrX 48593950 48594797 -118055499 + Lx3C LINE L1 6133 6974 -2 1 955 2094 160 25 81 chrX 48594890 48595106 -118055190 - MTC LTR MaLR -3 418 200 1 955 230 21 62 21 chrX 48595106 48595154 -118055142 + (TTG)n Simple_repeat Simple_repeat 2 51 0 1 955 1130 83 7 0 chrX 48595156 48595301 -118054995 - B1_Mm SINE Alu -1 146 1 1 955 2094 160 25 81 chrX 48595301 48595524 -118054772 - MTC LTR MaLR -222 199 1 1 955 1629 228 29 98 chrX 48595858 48596349 -118053947 + RMER1B Other Other 1 457 -609 1 955 5224 216 49 20 chrX 48596392 48597612 -118052684 + RMER1A Other Other 9 1030 0 1 955 916 114 0 0 chrX 48597614 48597763 -118052533 + L1_Mus4 LINE L1 6487 6635 -1 1 955 465 273 28 41 chrX 48597975 48598120 -118052176 - B1F SINE Alu -2 147 5 1 955 8163 153 42 9 chrX 48598695 48600139 -118050157 - Lx5 LINE L1 -1 7049 5540 1 955 1221 123 49 5 chrX 48600129 48600333 -118049963 + L1_Mur2 LINE L1 5084 5296 -581 1 955 1202 170 70 35 chrX 48600333 48600589 -118049707 + Lx4B LINE L1 6554 6818 -240 1 955 677 195 42 10 chrX 48600589 48600781 -118049515 + RMER17C LTR ERVK 1 198 -212 1 955 1230 46 0 0 chrX 48600823 48600976 -118049320 + (TTTC)n Simple_repeat Simple_repeat 1 153 0 1 955 998 194 81 44 chrX 48600983 48601231 -118049065 + Lx5 LINE L1 6780 7036 -14 1 955 335 23 0 22 chrX 48601231 48601276 -118049020 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 1 955 1553 87 0 9 chrX 48601303 48601513 -118048783 + L1_Mur2 LINE L1 5334 5541 -336 1 955 453 198 8 79 chrX 48601651 48601777 -118048519 - L1_Rod LINE L1 -452 5395 5279 1 955 385 297 39 67 chrX 48601770 48602164 -118048132 - L1M5 LINE L1 -2481 3665 3283 1 955 23 33 0 0 chrX 48602308 48602338 -118047958 + AT_rich Low_complexity Low_complexity 1 30 0 1 955 218 253 43 11 chrX 48602345 48602437 -118047859 + T-rich Low_complexity Low_complexity 2 96 0 1 955 246 275 0 14 chrX 48602490 48602560 -118047736 + CT-rich Low_complexity Low_complexity 2 70 0 1 955 300 311 25 8 chrX 48602648 48602768 -118047528 - L1M5 LINE L1 -3109 3037 2916 1 955 936 303 16 54 chrX 48602812 48603182 -118047114 - MLT1A0 LTR MaLR -6 359 4 1 955 3005 163 36 2 chrX 48603503 48604006 -118046290 + Lx6 LINE L1 6504 7023 -437 1 955 303 28 0 0 chrX 48604312 48604348 -118045948 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 955 354 194 17 35 chrX 48604756 48604873 -118045423 + ORR1B1 LTR MaLR 1 136 -258 1 955 852 221 14 58 chrX 48605023 48605230 -118045066 + Lx9 LINE L1 6977 7174 -470 1 955 2220 123 58 49 chrX 48605239 48605300 -118044996 - MTC LTR MaLR -7 414 371 1 955 582 54 0 0 chrX 48605300 48605374 -118044922 + (GGAAA)n Simple_repeat Simple_repeat 2 75 0 1 955 2220 123 58 49 chrX 48605374 48605722 -118044574 - MTC LTR MaLR -51 370 1 1 955 797 296 49 34 chrX 48605729 48606114 -118044182 + Lx9 LINE L1 7215 7605 -39 1 955 34 24 0 0 chrX 48606148 48606189 -118044107 + AT_rich Low_complexity Low_complexity 1 41 0 1 955 218 235 0 0 chrX 48606200 48606251 -118044045 + B3A SINE B2 1 51 -147 1 955 268 314 15 53 chrX 48606670 48606801 -118043495 + MLT1A LTR MaLR 1 126 -248 1 955 296 194 27 27 chrX 48606817 48606891 -118043405 + (TCTCTG)n Simple_repeat Simple_repeat 2 75 0 1 955 524 120 25 45 chrX 48606893 48607050 -118043246 + (TCTA)n Simple_repeat Simple_repeat 4 157 0 1 955 337 326 59 63 chrX 48607065 48607260 -118043036 + MLT1A LTR MaLR 173 382 -8 1 955 784 215 0 0 chrX 48607903 48608052 -118042244 + URR1B DNA MER1_type 2 150 -75 1 955 186 43 0 0 chrX 48608248 48608271 -118042025 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 1 955 535 269 114 0 chrX 48608582 48608731 -118041565 + B3 SINE B2 14 179 -37 1 955 533 15 0 15 chrX 48608731 48608798 -118041498 + (TAAAA)n Simple_repeat Simple_repeat 5 70 0 1 955 31615 11 3 3 chrX 48609279 48614463 -118035833 + L1Md_A LINE L1 422 5586 -297 1 955 8781 18 0 0 chrX 48614463 48615459 -118034837 + L1Md_A LINE L1 5587 6582 0 1 955 436 343 17 56 chrX 48615694 48615873 -118034423 - MER45A DNA Tip100 -3 175 4 1 955 1240 256 99 13 chrX 48616942 48617255 -118033041 + MTE2b LTR MaLR 1 340 -39 1 955 351 0 0 0 chrX 48617650 48617689 -118032607 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 955 342 45 0 0 chrX 48618733 48618777 -118031519 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 955 396 0 0 0 chrX 48618777 48618820 -118031476 + (GA)n Simple_repeat Simple_repeat 1 44 0 2 955 17290 112 4 4 chrX 48619403 48622162 -118028134 + L1Md_F2 LINE L1 2827 5585 -298 2 955 7133 67 11 53 chrX 48622163 48623190 -118027106 + L1Md_F2 LINE L1 5587 6570 -12 2 955 3938 95 3 36 chrX 48623191 48623779 -118026517 + L1_Mus2 LINE L1 5998 6566 0 2 119 36837 6 0 0 chrX 48623785 48629365 -118020931 + L1Md_A LINE L1 7 5586 -297 2 956 8989 6 0 0 chrX 48629365 48630361 -118019935 + L1Md_A LINE L1 5587 6582 0 2 956 189 0 0 0 chrX 48630688 48630709 -118019587 + (TC)n Simple_repeat Simple_repeat 2 22 0 2 956 826 110 0 20 chrX 48632100 48632249 -118018047 - L1_Mur1 LINE L1 -5694 1288 1143 2 956 7694 74 11 3 chrX 48632249 48633295 -118017001 + Lx3_Mus LINE L1 5947 7001 -8 2 956 1853 129 157 18 chrX 48633512 48633844 -118016452 - ORR1C1 LTR MaLR 0 378 1 2 956 347 244 99 46 chrX 48634139 48634413 -118015883 + L1_Rod LINE L1 959 1320 -6288 2 956 420 285 8 8 chrX 48634412 48634536 -118015760 + Lx6 LINE L1 7274 7397 -63 2 956 666 118 0 0 chrX 48634552 48634654 -118015642 + (GA)n Simple_repeat Simple_repeat 1 102 0 2 956 1412 258 44 44 chrX 48634654 48634727 -118015569 + L1_Rod LINE L1 1302 1374 -4473 2 956 3606 54 15 27 chrX 48634727 48635201 -118015095 + L1Md_F2 LINE L1 6103 6570 -12 2 956 1412 258 44 44 chrX 48635201 48635231 -118015065 + L1_Rod LINE L1 1375 1406 -4441 2 956 1480 132 31 16 chrX 48635231 48635485 -118014811 + Lx LINE L1 6391 6648 -6 2 956 1412 258 44 44 chrX 48635485 48636061 -118014235 + L1_Rod LINE L1 1407 1981 -3866 2 956 411 313 0 0 chrX 48636097 48636212 -118014084 + Lx9 LINE L1 7212 7326 -318 2 956 351 0 0 0 chrX 48636226 48636265 -118014031 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 956 414 0 0 0 chrX 48636350 48636396 -118013900 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 956 215 237 0 0 chrX 48636414 48636452 -118013844 - B4A SINE B4 -254 38 1 2 956 249 175 150 30 chrX 48636455 48636555 -118013741 + Lx9 LINE L1 7499 7610 -34 2 956 325 311 44 7 chrX 48636745 48636881 -118013415 + MIR3 SINE MIR 67 207 -1 2 956 347 316 181 38 chrX 48637197 48637434 -118012862 - L1MC4 LINE L1 -300 7742 7472 2 956 388 279 134 56 chrX 48637439 48637708 -118012588 - L1MD LINE L1 -821 5325 5036 2 956 488 285 43 43 chrX 48638157 48638505 -118011791 - L1MA6 LINE L1 -12 6288 5941 2 956 365 253 12 12 chrX 48638508 48638588 -118011708 - ID4_ SINE ID -2 81 2 2 956 207 100 0 0 chrX 48638602 48638632 -118011664 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 2 956 230 197 288 0 chrX 48638668 48638734 -118011562 - L1MA6 LINE L1 -372 5919 5835 2 956 22 0 0 0 chrX 48638835 48638857 -118011439 + AT_rich Low_complexity Low_complexity 1 22 0 2 956 455 298 12 12 chrX 48638873 48639046 -118011250 + L1M5 LINE L1 5621 5793 -386 2 956 189 256 0 23 chrX 48639367 48639411 -118010885 + MIRb SINE MIR 205 247 -21 2 956 194 62 0 30 chrX 48639710 48639743 -118010553 + (TAGA)n Simple_repeat Simple_repeat 2 33 0 2 956 2054 246 95 26 chrX 48640278 48640995 -118009301 + Lx8 LINE L1 6703 7468 -5 2 956 256 254 43 26 chrX 48641048 48641165 -118009131 - Lx7 LINE L1 0 7696 7578 2 956 220 186 0 0 chrX 48641167 48641210 -118009086 + CT-rich Low_complexity Low_complexity 2 44 0 2 956 523 259 26 0 chrX 48641897 48642013 -118008283 + PB1D7 SINE Alu 2 120 0 2 956 380 259 82 18 chrX 48642211 48642321 -118007975 + PB1D10 SINE Alu 1 117 0 2 956 234 217 17 0 chrX 48642386 48642446 -118007850 + A-rich Low_complexity Low_complexity 5 65 0 2 956 449 0 0 0 chrX 48642509 48642560 -118007736 + L1_Mm LINE L1 5536 5586 -297 2 956 8937 9 0 0 chrX 48642560 48643556 -118006740 + L1Md_A LINE L1 5587 6582 0 2 956 227 333 0 0 chrX 48644222 48644276 -118006020 - RSINE1 SINE B4 -110 55 2 2 956 500 245 0 28 chrX 48644370 48644479 -118005817 - B1_Mur1 SINE Alu -41 108 3 2 956 644 314 24 14 chrX 48644750 48644963 -118005333 + ID_B1 SINE B4 10 224 0 2 956 1916 86 4 4 chrX 48645805 48646075 -118004221 - L1_Mus2 LINE L1 -102 5781 5512 2 956 6113 72 0 1 chrX 48646075 48646867 -118003429 + L1_Mus2 LINE L1 5775 6565 -1 2 956 229 321 0 0 chrX 48647542 48647598 -118002698 - MER5A DNA MER1_type -69 120 65 2 956 1080 101 12 12 chrX 48647605 48647765 -118002531 + B2_Mm2 SINE B2 1 160 -35 2 956 705 24 0 0 chrX 48647765 48647848 -118002448 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 2 956 961 288 52 46 chrX 48648196 48648340 -118001956 + ORR1E LTR MaLR 30 174 -185 2 956 680 0 12 0 chrX 48648340 48648420 -118001876 + (TC)n Simple_repeat Simple_repeat 1 81 0 2 956 961 288 52 46 chrX 48648420 48648603 -118001693 + ORR1E LTR MaLR 175 358 -1 2 956 542 326 6 27 chrX 48649893 48650076 -118000220 + L2a LINE L2 3248 3426 0 2 956 615 27 0 0 chrX 48650791 48650864 -117999432 + (TCCC)n Simple_repeat Simple_repeat 4 76 0 2 956 3069 84 14 0 chrX 48651468 48651894 -117998402 + Lx LINE L1 6217 6648 -6 2 956 1370 120 29 5 chrX 48651894 48652103 -117998193 - RMER6C LTR ERVK -476 214 1 2 956 1476 346 47 18 chrX 48652210 48652764 -117997532 + MLT1E2 LTR MaLR 49 618 -9 2 956 5327 245 49 18 chrX 48653143 48655024 -117995272 + Lx7 LINE L1 5382 7338 -358 2 956 182 91 30 0 chrX 48655045 48655078 -117995218 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2 956 839 311 22 14 chrX 48655110 48655387 -117994909 + B4 SINE B4 2 280 -12 2 956 515 310 69 5 chrX 48655541 48655745 -117994551 - Charlie1a DNA MER1_type -309 1146 930 2 956 1292 298 74 28 chrX 48655720 48656318 -117993978 - Charlie1a DNA MER1_type -659 796 172 2 956 227 389 9 17 chrX 48656719 48656834 -117993462 + PB1D10 SINE Alu 3 116 -1 2 956 306 304 26 106 chrX 48656842 48656993 -117993303 + B4A SINE B4 2 140 -152 2 956 253 77 38 19 chrX 48657073 48657126 -117993170 + (TCTCTG)n Simple_repeat Simple_repeat 1 54 0 2 956 215 211 0 0 chrX 48657149 48657187 -117993109 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 956 418 361 74 37 chrX 48657473 48657714 -117992582 - MLT2B1 LTR ERVL -79 488 142 2 956 553 297 67 22 chrX 48659062 48659375 -117990921 + L1MA4 LINE L1 5696 6022 -278 2 956 583 242 57 0 chrX 48659837 48659961 -117990335 + B3 SINE B2 76 206 -10 2 956 728 47 0 0 chrX 48659989 48660095 -117990201 + L1Md_A LINE L1 6433 6538 -44 2 956 657 20 0 20 chrX 48660092 48660192 -117990104 + L1Md_F2 LINE L1 6483 6580 -2 2 956 468 181 0 0 chrX 48660320 48660447 -117989849 + CT-rich Low_complexity Low_complexity 2 128 0 2 956 1068 106 0 0 chrX 48660464 48660643 -117989653 + (TC)n Simple_repeat Simple_repeat 2 180 0 2 956 279 79 0 0 chrX 48661417 48661455 -117988841 + (TCC)n Simple_repeat Simple_repeat 2 39 0 2 956 507 259 0 0 chrX 48661467 48661575 -117988721 - PB1D10 SINE Alu -8 109 2 2 956 233 326 46 76 chrX 48661590 48661738 -117988558 - MIR SINE MIR -108 168 24 2 956 549 304 146 5 chrX 48662317 48662499 -117987797 + B4A SINE B4 2 209 -83 2 956 2565 49 3 78 chrX 48662499 48662697 -117987599 + ORR1A1 LTR MaLR 1 189 -157 2 956 4924 55 1 20 chrX 48662697 48663343 -117986953 + L1Md_F2 LINE L1 5937 6570 -12 2 956 2565 49 3 78 chrX 48663343 48663518 -117986778 + ORR1A1 LTR MaLR 190 346 0 2 956 286 232 115 58 chrX 48663518 48663601 -117986695 + B4A SINE B4 205 292 0 2 956 208 121 0 0 chrX 48664458 48664491 -117985805 + (TGG)n Simple_repeat Simple_repeat 3 35 0 2 956 267 54 0 0 chrX 48664549 48664586 -117985710 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 956 594 39 0 0 chrX 48664586 48664662 -117985634 + (GA)n Simple_repeat Simple_repeat 1 77 0 2 956 659 238 6 56 chrX 48664700 48664860 -117985436 - B3A SINE B2 -46 152 1 2 956 565 296 12 67 chrX 48665102 48665446 -117984850 + L1M2 LINE L1 3368 3692 -2451 2 956 201 129 0 0 chrX 48665446 48665477 -117984819 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 956 781 262 9 143 chrX 48665521 48665744 -117984552 + B3A SINE B2 1 193 0 2 956 240 300 18 0 chrX 48665760 48665870 -117984426 + L1_Mur3 LINE L1 3696 3807 -2073 2 956 3567 55 2 0 chrX 48665900 48666338 -117983958 + L1_Mus1 LINE L1 6129 6567 0 2 956 752 121 9 16 chrX 48666377 48666540 -117983756 + L1_Mur1 LINE L1 4748 4911 -975 2 956 5801 127 18 11 chrX 48666538 48667671 -117982625 - Lx3C LINE L1 -932 6044 4907 2 956 267 285 69 0 chrX 48667668 48667798 -117982498 + L1MA4A LINE L1 5769 5907 -396 2 956 235 311 11 43 chrX 48667846 48667940 -117982356 - RMER12 LTR ERVK -486 836 746 2 956 518 177 513 71 chrX 48668075 48668266 -117982030 + Lx6 LINE L1 6708 6982 -478 2 956 1565 89 34 8 chrX 48668276 48668513 -117981783 - L1Md_F2 LINE L1 -1 6581 6339 2 956 3309 58 4 0 chrX 48668513 48669089 -117981207 + L1Md_F2 LINE L1 5442 6020 -562 2 956 2565 85 6 6 chrX 48669093 48669449 -117980847 - L1_Mus3 LINE L1 -7 6631 6276 2 956 3650 70 0 1 chrX 48669449 48670056 -117980240 + L1_Mus2 LINE L1 5359 5964 -602 2 956 2063 151 93 5 chrX 48670062 48670449 -117979847 + Lx3C LINE L1 6556 6976 0 2 956 210 37 0 0 chrX 48670451 48670478 -117979818 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 956 630 0 0 0 chrX 48670524 48670594 -117979702 + (CAGAGA)n Simple_repeat Simple_repeat 2 71 0 2 956 1217 197 9 13 chrX 48670628 48670854 -117979442 - URR1B DNA MER1_type 0 225 1 2 956 738 238 5 20 chrX 48670894 48671091 -117979205 + Lx6 LINE L1 7098 7291 -169 2 956 27 73 0 0 chrX 48671266 48671321 -117978975 + AT_rich Low_complexity Low_complexity 1 55 0 2 956 828 274 112 18 chrX 48671439 48671833 -117978463 + L1MA9 LINE L1 5843 6273 -39 2 956 189 107 0 0 chrX 48671835 48671863 -117978433 + (CATATA)n Simple_repeat Simple_repeat 6 33 0 2 956 23 0 0 0 chrX 48671889 48671912 -117978384 + AT_rich Low_complexity Low_complexity 1 23 0 2 956 2039 133 12 12 chrX 48671918 48672245 -117978051 + ORR1A2 LTR MaLR 1 327 0 2 956 252 0 0 0 chrX 48674733 48674761 -117975535 + (TTAA)n Simple_repeat Simple_repeat 2 29 0 2 956 7102 166 31 31 chrX 48674761 48675735 -117974561 - Lx5 LINE L1 -16 7034 6078 2 956 3087 63 19 21 chrX 48675735 48676157 -117974139 + BGLII LTR ERVK 1 421 0 3 956 7102 166 31 31 chrX 48676157 48676569 -117973727 - Lx5 LINE L1 -973 6077 5648 2 956 2413 230 9 94 chrX 48676589 48677238 -117973058 - RMER19C LTR ERVK -17 594 1 3 956 14404 150 20 21 chrX 48677238 48679608 -117970688 - Lx5 LINE L1 -230 5647 3278 2 956 369 0 0 0 chrX 48679608 48679649 -117970647 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 956 351 0 0 0 chrX 48679649 48679687 -117970609 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 956 14404 150 20 21 chrX 48679687 48680105 -117970191 - Lx5 LINE L1 -2600 3277 2862 2 956 2070 144 87 10 chrX 48680096 48680214 -117970082 - Lx5 LINE L1 -4155 1722 1584 2 956 207 0 0 0 chrX 48680214 48680237 -117970059 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 956 453 36 0 0 chrX 48680237 48680291 -117970005 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 956 2070 150 64 5 chrX 48680291 48680727 -117969569 - Lx5 LINE L1 -4294 1583 1130 2 956 253 278 67 40 chrX 48681153 48681228 -117969068 + B3A SINE B2 2 78 -120 3 956 797 224 30 15 chrX 48681296 48681495 -117968801 + B3 SINE B2 1 202 -14 3 956 22 56 0 0 chrX 48681498 48681534 -117968762 + AT_rich Low_complexity Low_complexity 1 36 0 3 956 420 39 0 0 chrX 48681784 48681839 -117968457 + B2_Mm2 SINE B2 1 56 -137 3 956 2003 40 4 4 chrX 48681839 48682089 -117968207 + L1Md_F3 LINE L1 6334 6583 -1 3 956 365 222 66 33 chrX 48682104 48682225 -117968071 - L1_Mur2 LINE L1 -6066 646 522 3 956 4366 33 0 0 chrX 48682328 48682837 -117967459 + L1Md_F2 LINE L1 6061 6569 -13 3 956 1170 275 55 7 chrX 48683064 48683504 -117966792 - L1MA8 LINE L1 -216 6075 5615 3 956 462 169 141 7 chrX 48683596 48683745 -117966551 - L1MA8 LINE L1 -871 5269 5101 3 956 683 274 29 0 chrX 48683771 48683946 -117966350 + B3A SINE B2 1 180 -18 3 956 313 262 95 0 chrX 48684014 48684140 -117966156 - L1MA8 LINE L1 -1059 5081 4944 3 956 1567 153 26 22 chrX 48684143 48684411 -117965885 - RMER19A LTR ERVK -468 269 1 3 956 212 0 0 35 chrX 48684609 48684638 -117965658 + (TTATA)n Simple_repeat Simple_repeat 4 31 0 3 956 479 291 86 0 chrX 48685730 48685847 -117964449 + B1F2 SINE Alu 18 144 -5 3 956 495 291 0 99 chrX 48686342 48686483 -117963813 + ID_B1 SINE B4 94 220 -4 3 956 424 291 104 50 chrX 48686484 48686886 -117963410 + L1M4 LINE L1 4765 5188 -958 3 956 346 305 32 0 chrX 48686895 48686990 -117963306 + B1F1 SINE Alu 1 98 -51 3 956 208 139 0 0 chrX 48687144 48687180 -117963116 + (TAA)n Simple_repeat Simple_repeat 2 37 0 3 956 661 228 27 37 chrX 48687577 48687755 -117962541 + ID_B1 SINE B4 52 224 0 3 956 410 310 26 125 chrX 48688084 48688104 -117962192 + L2a LINE L2 3113 3129 -297 3 956 1076 232 0 5 chrX 48688104 48688316 -117961980 - B3 SINE B2 -5 211 1 3 956 410 310 26 125 chrX 48688316 48688608 -117961688 + L2a LINE L2 3130 3394 -32 3 956 283 240 48 77 chrX 48688653 48688757 -117961539 + L2a LINE L2 3326 3426 0 3 956 441 0 0 0 chrX 48689634 48689683 -117960613 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 956 429 20 0 0 chrX 48689683 48689732 -117960564 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 956 670 200 193 0 chrX 48689931 48690081 -117960215 + URR1A DNA MER1_type 48 226 0 3 956 1203 35 14 0 chrX 48690629 48690773 -117959523 - B1_Mm SINE Alu 0 147 2 3 956 482 256 21 32 chrX 48690913 48691103 -117959193 + L1MB7 LINE L1 5641 5828 -356 3 956 799 292 37 74 chrX 48691103 48691399 -117958897 + B4 SINE B4 2 286 -6 3 956 342 61 0 0 chrX 48691436 48691485 -117958811 + (TC)n Simple_repeat Simple_repeat 1 49 0 3 956 325 279 52 0 chrX 48691501 48691546 -117958750 + L1MB7 LINE L1 5816 5860 -318 3 956 781 44 0 9 chrX 48691546 48691660 -117958636 + L1Md_T LINE L1 6470 6582 0 3 956 325 279 52 0 chrX 48691660 48691750 -117958546 + L1MB7 LINE L1 5861 5957 -221 3 956 523 265 83 38 chrX 48691758 48691915 -117958381 + RSINE1 SINE B4 2 165 0 3 956 192 97 0 0 chrX 48694013 48694044 -117956252 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 956 223 374 80 16 chrX 48694092 48694217 -117956079 - MER5A DNA MER1_type -48 141 9 3 956 202 300 0 32 chrX 48694675 48694737 -117955559 - MIRc SINE MIR -64 204 145 3 956 1053 47 73 7 chrX 48695169 48695320 -117954976 - L1Md_F3 LINE L1 -1 6583 6423 3 956 304 323 104 57 chrX 48695508 48695787 -117954509 + B4 SINE B4 1 292 0 3 956 340 294 0 27 chrX 48695864 48695976 -117954320 - MLT1A1 LTR MaLR 0 408 300 3 956 1106 175 65 14 chrX 48696565 48696700 -117953596 + URR1A DNA MER1_type 2 136 -90 3 956 180 0 0 0 chrX 48696700 48696720 -117953576 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 956 1106 175 65 14 chrX 48696720 48696798 -117953498 + URR1A DNA MER1_type 137 226 0 3 956 806 267 77 77 chrX 48697208 48697727 -117952569 + L1MA5 LINE L1 4768 5286 -857 3 956 394 333 0 27 chrX 48697740 48697851 -117952445 + PB1D10 SINE Alu 4 111 -6 3 956 215 380 53 23 chrX 48697851 48697872 -117952424 + ID_B1 SINE B4 85 220 -4 3 956 1308 234 131 11 chrX 48697916 48698410 -117951886 + L1MA5 LINE L1 5380 5916 -384 3 956 267 308 152 11 chrX 48698449 48698541 -117951755 + PB1D7 SINE Alu 3 107 -13 3 956 265 228 93 40 chrX 48698563 48698714 -117951582 + L1MA5 LINE L1 5959 6117 -183 3 956 527 190 446 0 chrX 48698714 48698870 -117951426 - URR1B DNA MER1_type -1 224 1 3 956 181 307 26 39 chrX 48699038 48699116 -117951180 + MIR SINE MIR 37 113 -95 3 956 1159 219 122 51 chrX 48699453 48699789 -117950507 - MTD LTR MaLR -8 411 52 3 956 237 121 0 237 chrX 48699772 48699848 -117950448 - MTC-int LTR MaLR -208 1050 993 3 956 2513 234 50 44 chrX 48699848 48700488 -117949808 - MTC-int LTR MaLR -382 876 233 3 956 205 342 0 14 chrX 48700975 48701049 -117949247 + MIRm SINE MIR 203 275 -1 3 956 813 101 29 0 chrX 48703259 48703397 -117946899 + (TTTC)n Simple_repeat Simple_repeat 1 142 0 3 956 219 335 137 11 chrX 48703774 48703964 -117946332 + L2c LINE L2 3171 3384 -3 3 956 35221 26 2 15 chrX 48704270 48709492 -117940804 + L1Md_A LINE L1 440 5586 -297 3 956 8384 36 0 0 chrX 48709492 48710487 -117939809 + L1Md_A LINE L1 5587 6581 -1 3 956 25 51 0 0 chrX 48711110 48711149 -117939147 + AT_rich Low_complexity Low_complexity 1 39 0 3 956 342 65 0 0 chrX 48711153 48711199 -117939097 - L1Md_F2 LINE L1 -146 6436 6391 3 956 413 290 151 44 chrX 48711204 48711475 -117938821 + MamRep1161 DNA TcMar 314 613 -344 3 956 354 80 0 0 chrX 48711991 48712041 -117938255 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 956 304 293 32 45 chrX 48712056 48712213 -117938083 + L1MEg LINE L1 1908 2062 -4022 3 956 594 189 89 30 chrX 48712701 48712903 -117937393 + Lx9 LINE L1 7423 7636 -8 3 956 1033 217 79 4 chrX 48712992 48713246 -117937050 - Lx5 LINE L1 -39 7011 6739 3 956 227 293 10 42 chrX 48713494 48713601 -117936695 + MIRb SINE MIR 52 158 -110 3 956 331 300 50 0 chrX 48713768 48713868 -117936428 + PB1D10 SINE Alu 3 107 -10 3 956 727 184 286 0 chrX 48713999 48714167 -117936129 + B3 SINE B2 1 216 0 3 956 228 167 0 0 chrX 48714448 48714496 -117935800 + GA-rich Low_complexity Low_complexity 2 49 0 3 956 297 0 0 0 chrX 48715865 48715898 -117934398 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 3 956 272 361 0 0 chrX 48715983 48716066 -117934230 - LTR16B2 LTR ERVL -379 83 1 3 956 1006 230 145 25 chrX 48716124 48716441 -117933855 - ORR1E LTR MaLR 0 359 5 3 956 295 289 0 0 chrX 48716514 48716590 -117933706 - ID4 SINE ID -6 77 2 3 956 427 293 28 28 chrX 48716600 48716744 -117933552 - B1F SINE Alu -5 144 1 3 956 224 260 20 0 chrX 48717282 48717332 -117932964 + ID4_ SINE ID 26 76 -7 3 956 214 299 13 118 chrX 48717332 48717358 -117932938 + ID_B1 SINE B4 27 94 -130 3 956 207 0 0 0 chrX 48717393 48717416 -117932880 + (TCTA)n Simple_repeat Simple_repeat 2 24 0 3 956 513 290 24 43 chrX 48717687 48717896 -117932400 - MIR SINE MIR 0 262 58 3 956 319 249 133 26 chrX 48718050 48718198 -117932098 + MIRb SINE MIR 88 255 -13 3 956 183 306 180 20 chrX 48718626 48718726 -117931570 - MIRb SINE MIR -45 223 108 3 956 614 150 412 0 chrX 48718951 48719104 -117931192 + B3 SINE B2 1 216 0 3 956 258 56 0 0 chrX 48719579 48719615 -117930681 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 956 1597 151 118 72 chrX 48719752 48719897 -117930399 + ORR1C2 LTR MaLR 1 150 -234 3 956 243 0 0 0 chrX 48719897 48719924 -117930372 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 956 1089 79 0 0 chrX 48719924 48720063 -117930233 - B1_Mus1 SINE Alu -8 140 2 3 956 1597 151 118 72 chrX 48720063 48720279 -117930017 + ORR1C2 LTR MaLR 151 379 -5 3 956 26 88 0 0 chrX 48720352 48720420 -117929876 + AT_rich Low_complexity Low_complexity 1 68 0 3 956 202 288 12 36 chrX 48720577 48720660 -117929636 + MIRb SINE MIR 176 256 -12 3 956 345 313 0 29 chrX 48721210 48721312 -117928984 + PB1 SINE Alu 6 104 -23 3 956 214 381 50 44 chrX 48721642 48721823 -117928473 + L3 LINE CR1 3254 3435 -1054 3 956 414 0 0 0 chrX 48723624 48723670 -117926626 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 956 355 355 76 28 chrX 48723686 48723707 -117926589 - L1MC4a LINE L1 -2031 5851 5831 3 956 318 50 0 0 chrX 48723707 48723747 -117926549 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 956 355 330 107 53 chrX 48723747 48724054 -117926242 - L1MC4a LINE L1 -2052 5830 5497 3 956 5843 77 3 6 chrX 48724054 48724783 -117925513 - L1_Mus3 LINE L1 -1 6637 5911 3 956 325 317 123 67 chrX 48724783 48724938 -117925358 - L1MC4a LINE L1 -628 5496 5345 3 956 387 0 0 0 chrX 48724969 48725012 -117925284 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 956 24 0 0 0 chrX 48725179 48725203 -117925093 + AT_rich Low_complexity Low_complexity 1 24 0 3 956 182 279 66 0 chrX 48725860 48725921 -117924375 - L3 LINE CR1 -3602 887 823 3 956 441 0 0 0 chrX 48726453 48726502 -117923794 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 956 198 207 0 0 chrX 48726503 48726561 -117923735 + GA-rich Low_complexity Low_complexity 2 59 0 3 956 389 183 36 24 chrX 48726844 48726928 -117923368 + Lx4B LINE L1 6686 6770 -288 3 956 309 303 87 113 chrX 48726950 48727064 -117923232 + MLT2F LTR ERVL 1 118 -545 3 956 393 275 0 0 chrX 48727064 48727144 -117923152 - ID4_ SINE ID -3 80 1 3 956 309 303 87 113 chrX 48727144 48727304 -117922992 + MLT2F LTR ERVL 119 268 -395 3 956 237 245 135 81 chrX 48727347 48727458 -117922838 + MLT2F LTR ERVL 478 594 -69 3 956 990 227 69 158 chrX 48728381 48728773 -117921523 - RMER15 LTR ERVL -191 384 28 3 956 450 0 0 0 chrX 48728879 48728929 -117921367 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 956 192 351 0 13 chrX 48730220 48730295 -117920001 - MIR SINE MIR -50 212 139 3 956 3604 37 0 0 chrX 48730317 48730719 -117919577 + L1Md_A LINE L1 6180 6581 -1 4 956 186 266 215 15 chrX 48730770 48730835 -117919461 - MIR SINE MIR -177 85 8 3 956 722 266 56 25 chrX 48731631 48731828 -117918468 - B3 SINE B2 -13 203 1 4 956 243 317 0 0 chrX 48732165 48732225 -117918071 + B1_Mur3 SINE Alu 2 61 -88 4 956 7442 157 36 19 chrX 48732237 48733605 -117916691 + Lx4B LINE L1 5599 7045 -13 4 956 4506 79 4 2 chrX 48733898 48734454 -117915842 + L1_Mus2 LINE L1 6010 6566 0 4 956 1019 47 8 0 chrX 48735442 48735569 -117914727 + L1_Mus2 LINE L1 6438 6565 -1 4 956 510 254 75 23 chrX 48736263 48736396 -117913900 - ID_B1 SINE B4 -7 217 78 4 956 433 308 0 0 chrX 48736740 48736857 -117913439 - B1F SINE Alu -11 138 22 4 956 272 315 0 0 chrX 48737568 48737641 -117912655 + GA-rich Low_complexity Low_complexity 3 75 0 4 956 820 292 125 22 chrX 48738789 48739108 -117911188 + ORR1E LTR MaLR 8 359 0 4 956 787 215 184 21 chrX 48739251 48739515 -117910781 + ORR1E LTR MaLR 1 322 -48 4 956 1089 72 51 57 chrX 48739807 48739984 -117910312 - B2_Mm2 SINE B2 0 195 20 4 956 252 161 0 0 chrX 48740804 48740866 -117909430 + T-rich Low_complexity Low_complexity 1 62 0 4 956 495 0 0 0 chrX 48746104 48746159 -117904137 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 956 567 0 0 0 chrX 48746159 48746221 -117904075 + (GA)n Simple_repeat Simple_repeat 2 64 0 4 956 968 246 20 14 chrX 48746412 48746628 -117903668 + B4A SINE B4 1 219 -73 4 956 198 0 0 0 chrX 48747214 48747236 -117903060 + (GGGAGA)n Simple_repeat Simple_repeat 2 23 0 4 956 257 275 0 0 chrX 48747623 48747703 -117902593 + (TATG)n Simple_repeat Simple_repeat 1 80 0 4 956 678 229 76 28 chrX 48747707 48747851 -117902445 - RSINE1 SINE B4 -13 152 2 4 956 288 272 141 0 chrX 48748126 48748218 -117902078 - L3 LINE CR1 -904 3585 3481 4 956 723 271 7 19 chrX 48748507 48748661 -117901635 + MER70B LTR ERVL 3 154 -424 4 956 371 293 170 48 chrX 48748690 48748855 -117901441 + MER70B LTR ERVL 91 275 -303 4 956 663 221 23 0 chrX 48748874 48749005 -117901291 - B1F SINE Alu -7 142 9 4 956 538 368 18 0 chrX 48749019 48749182 -117901114 + MER70B LTR ERVL 267 432 -146 4 956 3885 86 8 0 chrX 48749504 48750005 -117900291 + L1_Mus3 LINE L1 6131 6635 -3 4 956 267 361 62 25 chrX 48750132 48750294 -117900002 + MER20 DNA MER1_type 32 199 -20 4 956 317 373 71 36 chrX 48750470 48750723 -117899573 + L2b LINE L2 3109 3370 -5 4 956 1103 130 206 0 chrX 48751478 48751662 -117898634 - URR1A DNA MER1_type 0 226 5 4 956 492 278 77 53 chrX 48752526 48752735 -117897561 - MARNA DNA Mariner -368 218 5 4 956 333 0 0 0 chrX 48754800 48754837 -117895459 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 956 345 235 0 0 chrX 48754839 48754924 -117895372 + (TA)n Simple_repeat Simple_repeat 2 86 0 4 956 252 0 0 0 chrX 48754926 48754954 -117895342 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 956 186 262 167 0 chrX 48756456 48756540 -117893756 - MIRc SINE MIR -133 135 38 4 956 27 29 0 0 chrX 48756540 48756574 -117893722 + AT_rich Low_complexity Low_complexity 1 34 0 4 956 213 178 0 0 chrX 48756577 48756622 -117893674 + (CTA)n Simple_repeat Simple_repeat 3 47 0 4 956 241 316 106 62 chrX 48758015 48758193 -117892103 - MIRc SINE MIR -71 197 8 4 957 691 317 58 55 chrX 48759120 48759447 -117890849 - MER2 DNA MER2_type -17 328 1 4 957 1138 91 212 16 chrX 48759547 48759736 -117890560 + URR1A DNA MER1_type 1 226 0 4 957 387 0 0 0 chrX 48760936 48760979 -117889317 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 957 369 0 0 0 chrX 48761054 48761095 -117889201 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 957 326 200 0 0 chrX 48761214 48761269 -117889027 - PB1D7 SINE Alu -45 75 21 4 957 370 296 39 116 chrX 48761722 48761955 -117888341 - MIR SINE MIR -32 230 16 4 957 899 266 64 25 chrX 48761997 48762278 -117888018 + B4 SINE B4 1 292 0 4 957 201 74 0 0 chrX 48762304 48762331 -117887965 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 957 214 231 0 0 chrX 48763104 48763156 -117887140 + L4 LINE RTE 1977 2028 -1 4 957 240 322 11 11 chrX 48764790 48764878 -117885418 - MIR SINE MIR -116 146 59 4 957 181 263 17 34 chrX 48765599 48765658 -117884638 + L2b LINE L2 3318 3375 0 4 957 229 211 114 38 chrX 48767388 48767467 -117882829 - MTEa LTR MaLR -7 372 288 4 957 1124 204 5 24 chrX 48768607 48768818 -117881478 + B3 SINE B2 1 207 -9 4 957 199 247 24 61 chrX 48768959 48769041 -117881255 + MIRb SINE MIR 184 262 -6 4 957 367 321 83 6 chrX 48769213 48769382 -117880914 + MIRb SINE MIR 17 198 -70 4 957 775 254 40 92 chrX 48769528 48769779 -117880517 - MTEa LTR MaLR -141 238 1 4 957 779 286 9 47 chrX 48769965 48770178 -117880118 - ID_B1 SINE B4 -16 208 4 4 957 188 280 106 39 chrX 48770598 48770702 -117879594 - L3 LINE CR1 -3505 984 874 4 957 352 323 71 0 chrX 48770830 48770957 -117879339 + MIRb SINE MIR 118 253 -15 4 957 1204 246 50 61 chrX 48771038 48771417 -117878879 + MTE2a LTR MaLR 35 419 0 4 957 467 317 0 0 chrX 48771613 48771717 -117878579 - PB1D10 SINE Alu -8 109 6 4 957 307 285 15 96 chrX 48771616 48771752 -117878544 - MT2B LTR ERVL -339 262 138 4 957 689 282 150 18 chrX 48771893 48772188 -117878108 + ORR1E LTR MaLR 9 359 0 4 957 921 319 94 48 chrX 48772628 48772923 -117877373 + L1M4 LINE L1 4107 4415 -1731 4 957 363 296 0 0 chrX 48772923 48773004 -117877292 + ID4 SINE ID 1 81 -2 4 957 921 319 94 48 chrX 48773004 48773505 -117876791 + L1M4 LINE L1 4416 4939 -1207 4 957 1202 241 112 7 chrX 48773526 48773831 -117876465 + ORR1D2 LTR MaLR 25 361 -9 4 957 2232 54 130 0 chrX 48773850 48774126 -117876170 + Lx3_Mus LINE L1 6693 7004 -5 4 957 536 279 10 26 chrX 48774133 48774328 -117875968 + L1M4 LINE L1 4965 5156 -990 4 957 388 239 41 55 chrX 48775045 48775228 -117875068 - MIRb SINE MIR -8 260 7 4 957 728 262 0 0 chrX 48776225 48776374 -117873922 + B1_Mur1 SINE Alu 1 149 0 4 957 306 0 0 0 chrX 48776532 48776566 -117873730 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 957 553 311 52 97 chrX 48776566 48776915 -117873381 - ORR1E LTR MaLR -17 342 10 4 957 435 224 0 0 chrX 48776936 48777012 -117873284 - PB1D10 SINE Alu -5 112 37 4 957 769 286 50 20 chrX 48777053 48777253 -117873043 - B4 SINE B4 -83 209 4 4 957 336 262 38 0 chrX 48777255 48777335 -117872961 + Tigger5 DNA MER2_type 2323 2405 -1 4 957 245 301 27 37 chrX 48777754 48777878 -117872418 + MIR SINE MIR 28 145 -123 4 957 275 245 70 18 chrX 48777947 48778047 -117872249 + PB1D10 SINE Alu 6 120 0 4 957 489 360 50 45 chrX 48778819 48779017 -117871279 - B4A SINE B4 -92 200 2 4 957 190 275 45 68 chrX 48779221 48779322 -117870974 + L2c LINE L2 3240 3352 -35 4 957 342 0 0 0 chrX 48779464 48779502 -117870794 + (TAA)n Simple_repeat Simple_repeat 2 39 0 4 957 185 264 14 0 chrX 48782004 48782076 -117868220 + CT-rich Low_complexity Low_complexity 1 73 0 4 957 252 0 0 0 chrX 48782971 48782999 -117867297 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 957 214 217 43 0 chrX 48783003 48783049 -117867247 + (CACG)n Simple_repeat Simple_repeat 3 50 0 4 957 5980 66 8 1 chrX 48783774 48784551 -117865745 + L1_Mus2 LINE L1 5785 6566 0 4 957 221 83 0 27 chrX 48784599 48784636 -117865660 + (GGAA)n Simple_repeat Simple_repeat 2 37 0 4 957 590 280 37 14 chrX 48784764 48784978 -117865318 + ID_B1 SINE B4 5 223 -1 4 957 235 186 66 33 chrX 48786582 48786643 -117863653 - ID4_ SINE ID -16 67 5 4 957 36920 4 0 0 chrX 48789869 48795241 -117855055 + L1Md_A LINE L1 214 5586 -297 4 957 9029 4 0 0 chrX 48795241 48796236 -117854060 + L1Md_A LINE L1 5587 6581 -1 4 957 235 366 0 58 chrX 48796444 48796531 -117853765 - MER5A DNA MER1_type -107 82 1 4 957 203 342 76 0 chrX 48797445 48797524 -117852772 + MIRb SINE MIR 21 105 -163 4 957 251 291 51 80 chrX 48798349 48798487 -117851809 - L2 LINE L2 -952 2467 2334 4 957 2342 60 67 0 chrX 48799423 48799737 -117850559 + ORR1A1 LTR MaLR 2 336 -10 4 957 690 292 0 19 chrX 48800353 48800510 -117849786 + RSINE1 SINE B4 12 165 0 4 957 274 310 42 33 chrX 48801639 48801759 -117848537 - L4 LINE RTE -191 1838 1718 4 957 255 125 0 0 chrX 48801878 48801918 -117848378 + (TATG)n Simple_repeat Simple_repeat 1 40 0 4 957 501 97 0 0 chrX 48801918 48801990 -117848306 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 4 957 2039 211 70 5 chrX 48804477 48805049 -117845247 + Lx7 LINE L1 5445 6079 -1617 4 957 388 279 0 0 chrX 48805100 48805179 -117845117 + ID4 SINE ID 1 79 -4 4 957 235 273 0 15 chrX 48806908 48806975 -117843321 - Cheshire DNA MER1_type -2 2418 2358 4 957 787 259 41 0 chrX 48806965 48807162 -117843134 - Cheshire DNA MER1_type -2166 254 50 4 957 274 242 106 0 chrX 48807181 48807247 -117843049 + ID2 SINE ID 1 73 -10 4 957 783 218 81 49 chrX 48807858 48808166 -117842130 - Lx5 LINE L1 -2 7048 6731 4 957 252 297 27 0 chrX 48808321 48808395 -117841901 + ID2 SINE ID 2 77 -6 4 957 924 98 0 0 chrX 48811489 48811622 -117838674 + (GGGAA)n Simple_repeat Simple_repeat 4 136 0 4 957 651 128 0 0 chrX 48811622 48811731 -117838565 + (GGGA)n Simple_repeat Simple_repeat 4 112 0 4 957 860 294 56 20 chrX 48811915 48812307 -117837989 + Lx8 LINE L1 6842 7247 -226 4 957 338 360 0 0 chrX 48812550 48812639 -117837657 + PB1D7 SINE Alu 12 100 -20 4 957 255 361 88 29 chrX 48812734 48812905 -117837391 - L2 LINE L2 -746 2673 2493 4 957 339 342 59 8 chrX 48814159 48814277 -117836019 - MIR SINE MIR -58 150 27 5 957 186 83 51 77 chrX 48815084 48815162 -117835134 + A-rich Low_complexity Low_complexity 3 78 0 5 957 539 225 95 101 chrX 48815948 48816116 -117834180 + B3 SINE B2 1 167 -49 5 957 471 63 0 0 chrX 48816125 48816188 -117834108 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 957 180 0 0 0 chrX 48816231 48816251 -117834045 + (GGA)n Simple_repeat Simple_repeat 3 22 0 5 957 998 123 6 0 chrX 48816255 48816417 -117833879 + (GAA)n Simple_repeat Simple_repeat 3 165 0 5 957 297 109 0 0 chrX 48817881 48817927 -117832369 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 957 254 298 24 102 chrX 48818747 48818761 -117831535 + MT2B LTR ERVL 151 264 -334 5 957 388 327 0 27 chrX 48818761 48818871 -117831425 + PB1D10 SINE Alu 2 108 -9 5 957 211 286 198 23 chrX 48820403 48820489 -117829807 + L2b LINE L2 3274 3374 -1 5 957 502 301 0 29 chrX 48820524 48820664 -117829632 + B1F SINE Alu 1 136 -13 5 957 275 368 36 67 chrX 48821152 48821411 -117828885 - L2 LINE L2 -1004 2415 2169 5 957 396 0 0 0 chrX 48821411 48821455 -117828841 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 957 275 368 36 67 chrX 48821455 48821644 -117828652 - L2 LINE L2 -1251 2168 1981 5 957 259 354 53 9 chrX 48821889 48822003 -117828293 - MIRb SINE MIR -121 147 29 5 957 261 0 0 0 chrX 48824466 48824495 -117825801 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 957 255 125 0 0 chrX 48825083 48825123 -117825173 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 957 236 268 0 152 chrX 48825320 48825386 -117824910 - RSINE1 SINE B4 0 165 110 5 957 580 311 8 0 chrX 48825415 48825547 -117824749 - RSINE1 SINE B4 -23 142 10 5 957 558 0 0 0 chrX 48826644 48826706 -117823590 + (GA)n Simple_repeat Simple_repeat 1 62 0 5 957 237 312 106 35 chrX 48826822 48826935 -117823361 - L2a LINE L2 -6 3420 3300 5 957 702 217 74 0 chrX 48827233 48827408 -117822888 + Lx5 LINE L1 6852 7039 -11 5 957 357 291 137 28 chrX 48827803 48828015 -117822281 - Lx8 LINE L1 -16 7457 7223 5 957 258 320 29 58 chrX 48828193 48828296 -117822000 + MIR SINE MIR 33 132 -76 5 957 241 296 0 14 chrX 48828863 48828935 -117821361 + CT-rich Low_complexity Low_complexity 2 72 0 5 957 791 169 0 0 chrX 48829694 48829818 -117820478 + B3 SINE B2 7 130 -86 5 957 35 0 0 0 chrX 48829827 48829862 -117820434 + AT_rich Low_complexity Low_complexity 1 35 0 5 957 926 139 201 11 chrX 48831507 48831696 -117818600 + URR1A DNA MER1_type 1 225 -1 5 957 294 287 208 24 chrX 48833617 48833742 -117816554 - ORR1E LTR MaLR -148 222 75 5 957 312 48 0 0 chrX 48833799 48833841 -117816455 + (CAA)n Simple_repeat Simple_repeat 2 43 0 5 957 432 211 26 35 chrX 48833841 48833943 -117816353 - ORR1E LTR MaLR -256 103 1 5 957 544 199 41 33 chrX 48833952 48834097 -117816199 + ORR1D2 LTR MaLR 212 366 -4 5 957 229 224 149 0 chrX 48834338 48834405 -117815891 - MIR SINE MIR -5 257 181 5 957 427 320 19 45 chrX 48834445 48834599 -117815697 + RSINE1 SINE B4 14 163 -2 5 957 190 167 101 130 chrX 48834676 48834745 -117815551 - MIR SINE MIR -184 78 12 5 957 257 315 130 0 chrX 48834786 48834878 -117815418 - MIRb SINE MIR -96 172 69 5 957 662 275 108 34 chrX 48836946 48837270 -117813026 - L1MB8 LINE L1 -37 6141 5794 5 957 318 193 18 0 chrX 48837415 48837524 -117812772 + CT-rich Low_complexity Low_complexity 1 110 0 5 957 199 350 0 0 chrX 48837562 48837622 -117812674 - L2c LINE L2 -43 3344 3285 5 957 2095 265 40 16 chrX 48837825 48838472 -117811824 - L1MB5 LINE L1 -1 6173 5511 5 957 222 37 0 0 chrX 48839446 48839473 -117810823 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 957 586 281 6 67 chrX 48839479 48839658 -117810638 - B4 SINE B4 -12 280 113 5 957 828 273 48 55 chrX 48839664 48840063 -117810233 + Charlie1 DNA MER1_type 2386 2781 0 5 957 5066 158 50 24 chrX 48840471 48841350 -117808946 + RMER19B LTR ERVK 1 902 0 5 957 26 0 0 0 chrX 48842001 48842027 -117808269 + AT_rich Low_complexity Low_complexity 1 26 0 5 957 384 22 0 0 chrX 48842271 48842316 -117807980 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 957 274 272 37 0 chrX 48842423 48842504 -117807792 - MIR3 SINE MIR -38 170 87 5 957 1155 229 35 47 chrX 48843389 48843733 -117806563 - RLTR15 LTR ERVK -17 342 3 5 957 873 100 129 15 chrX 48844216 48844348 -117805948 - B1_Mus1 SINE Alu -1 147 1 5 957 248 306 124 39 chrX 48844627 48844756 -117805540 - MIRb SINE MIR -34 234 95 5 957 663 78 0 0 chrX 48844875 48844965 -117805331 + (TC)n Simple_repeat Simple_repeat 1 90 0 5 957 351 0 0 0 chrX 48845101 48845140 -117805156 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 957 479 264 44 117 chrX 48845847 48846053 -117804243 + B3 SINE B2 3 193 -2 5 957 1017 193 61 5 chrX 48847344 48847542 -117802754 + B3 SINE B2 3 211 -5 5 957 603 0 0 0 chrX 48848210 48848277 -117802019 + (GA)n Simple_repeat Simple_repeat 1 67 0 5 957 22 35 0 0 chrX 48850112 48850141 -117800155 + AT_rich Low_complexity Low_complexity 1 29 0 5 957 423 0 0 0 chrX 48850316 48850363 -117799933 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 957 180 77 0 0 chrX 48850368 48850394 -117799902 + (CAGA)n Simple_repeat Simple_repeat 1 26 0 5 957 291 368 40 24 chrX 48850621 48850869 -117799427 - L1M5 LINE L1 -498 5626 5375 5 957 226 376 54 31 chrX 48851769 48851898 -117798398 + MIR SINE MIR 16 147 -61 5 957 372 265 321 14 chrX 48851942 48852160 -117798136 + B4A SINE B4 2 286 -6 5 957 551 286 11 63 chrX 48854344 48854534 -117795762 + ID_B1 SINE B4 25 204 -20 5 957 380 289 52 26 chrX 48855602 48855755 -117794541 + RMER15 LTR ERVL 406 562 -13 5 957 780 111 0 0 chrX 48856587 48856704 -117793592 + (GGGA)n Simple_repeat Simple_repeat 2 118 0 5 957 259 308 68 95 chrX 48856848 48856995 -117793301 + MIR3 SINE MIR 42 184 -24 5 957 193 306 52 115 chrX 48857925 48858117 -117792179 + L2b LINE L2 3053 3232 -155 5 957 275 221 0 16 chrX 48859103 48859175 -117791121 + L2b LINE L2 3311 3422 -4 5 957 234 298 42 45 chrX 48860664 48860809 -117789487 - MIRc SINE MIR -27 235 78 5 957 980 119 0 6 chrX 48861514 48861674 -117788622 + (TTTC)n Simple_repeat Simple_repeat 1 159 0 5 957 223 298 0 95 chrX 48861729 48861792 -117788504 - B4 SINE B4 -155 137 81 5 957 217 309 0 0 chrX 48862072 48862127 -117788169 - B1F SINE Alu 0 149 95 5 957 215 339 15 92 chrX 48862123 48862171 -117788125 - ID_B1 SINE B4 -102 122 3 5 957 224 312 12 24 chrX 48862171 48862253 -117788043 - ID4_ SINE ID 0 83 3 5 957 267 218 65 54 chrX 48862388 48862480 -117787816 - L1MC3 LINE L1 -260 7525 7433 5 957 1165 290 65 60 chrX 48862521 48863107 -117787189 - L1MC3 LINE L1 -491 7294 6706 5 957 499 325 39 7 chrX 48863150 48863305 -117786991 + RSINE1 SINE B4 6 165 0 5 957 27 29 0 0 chrX 48863333 48863367 -117786929 + AT_rich Low_complexity Low_complexity 1 34 0 5 957 192 125 0 0 chrX 48863838 48863870 -117786426 + (TAGG)n Simple_repeat Simple_repeat 4 35 0 5 957 735 335 9 17 chrX 48863885 48864116 -117786180 - B4A SINE B4 -63 229 1 5 957 423 0 0 0 chrX 48864134 48864181 -117786115 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 957 676 250 107 6 chrX 48864230 48864407 -117785889 - B3 SINE B2 -20 196 2 5 957 236 0 88 0 chrX 48864436 48864470 -117785826 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 5 957 800 176 14 34 chrX 48864470 48864606 -117785690 - B1_Mur2 SINE Alu -12 137 1 5 957 207 69 0 0 chrX 48864829 48864858 -117785438 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 957 803 302 15 0 chrX 48864914 48865119 -117785177 - ID_B1 SINE B4 -12 212 5 5 957 336 311 46 7 chrX 48868661 48868813 -117781483 + L1MB5 LINE L1 5997 6154 -20 5 957 230 340 56 9 chrX 48869472 48869579 -117780717 - MIRb SINE MIR -132 136 25 5 957 957 129 12 6 chrX 48869693 48869865 -117780431 + (GGGGA)n Simple_repeat Simple_repeat 4 176 0 5 957 185 384 11 11 chrX 48870530 48870617 -117779679 + MIRb SINE MIR 179 265 -3 5 957 227 304 103 17 chrX 48870657 48870774 -117779522 + L4 LINE RTE 1711 1837 -192 5 957 205 299 102 11 chrX 48870794 48870882 -117779414 + L2c LINE L2 3278 3373 -14 5 957 341 352 102 43 chrX 48871423 48871610 -117778686 + MIRb SINE MIR 55 252 -16 5 957 322 323 44 29 chrX 48872624 48872761 -117777535 - MIR3 SINE MIR -19 189 51 5 957 189 0 0 0 chrX 48872881 48872902 -117777394 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 5 957 308 372 107 10 chrX 48873867 48874073 -117776223 - MIR SINE MIR -5 257 32 5 957 218 111 0 53 chrX 48874073 48874130 -117776166 + A-rich Low_complexity Low_complexity 1 54 0 5 957 266 353 30 40 chrX 48874540 48874738 -117775558 + MIRc SINE MIR 19 214 -54 5 957 481 289 237 0 chrX 48875344 48875517 -117774779 + ID_B1 SINE B4 6 219 -5 5 957 803 294 15 0 chrX 48875827 48876024 -117774272 + B3 SINE B2 6 205 -11 5 957 315 0 0 0 chrX 48876232 48876267 -117774029 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 5 957 631 288 96 60 chrX 48876400 48876681 -117773615 + B4 SINE B4 1 291 -1 5 957 1941 286 116 55 chrX 48877034 48877939 -117772357 - Tigger10 DNA Tigger -395 1448 489 5 957 591 321 16 11 chrX 48878905 48879091 -117771205 + B3A SINE B2 1 187 -11 5 957 243 342 0 0 chrX 48879438 48879517 -117770779 + ID4_ SINE ID 3 81 -2 5 957 1393 291 79 30 chrX 48881004 48881701 -117768595 + L1MB7 LINE L1 5454 6184 0 5 957 442 214 61 10 chrX 48881824 48881923 -117768373 - L2a LINE L2 -22 3404 3301 6 957 3735 25 0 0 chrX 48882494 48882890 -117767406 - MTA_Mm LTR MaLR 0 396 1 6 957 10175 22 0 0 chrX 48882890 48883988 -117766308 - MTA_Mm-int LTR MaLR 0 1098 1 6 957 3772 20 0 0 chrX 48883988 48884384 -117765912 - MTA_Mm LTR MaLR 0 396 1 6 957 549 0 0 0 chrX 48884806 48884867 -117765429 + (GA)n Simple_repeat Simple_repeat 1 61 0 6 957 1241 193 59 0 chrX 48885974 48886228 -117764068 + Lx3C LINE L1 6706 6974 -2 6 957 539 298 61 42 chrX 48886671 48886885 -117763411 + MER20 DNA MER1_type 1 218 -1 6 957 458 264 7 35 chrX 48886895 48887040 -117763256 + B1F SINE Alu 9 149 0 6 957 482 259 20 75 chrX 48887021 48887167 -117763129 - B2_Mm2 SINE B2 -56 139 2 6 957 35 0 0 0 chrX 48887767 48887802 -117762494 + AT_rich Low_complexity Low_complexity 1 35 0 6 957 279 323 86 41 chrX 48887903 48888100 -117762196 + Lx8 LINE L1 7253 7458 -15 6 957 1140 103 15 53 chrX 48888101 48888307 -117761989 + Lx LINE L1 6450 6647 -7 6 957 324 0 0 0 chrX 48888328 48888364 -117761932 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 6 957 463 252 10 10 chrX 48888370 48888470 -117761826 + ID_B1 SINE B4 1 100 -124 6 957 309 278 68 17 chrX 48889570 48889687 -117760609 + MIR SINE MIR 106 228 -34 6 958 270 0 0 0 chrX 48890319 48890349 -117759947 + (TCCA)n Simple_repeat Simple_repeat 4 33 0 6 958 28 48 0 0 chrX 48890913 48890955 -117759341 + AT_rich Low_complexity Low_complexity 1 42 0 6 958 311 280 100 70 chrX 48890978 48891078 -117759218 + PB1D10 SINE Alu 13 115 -2 6 958 239 200 67 0 chrX 48891786 48891831 -117758465 - PB1D10 SINE Alu -46 71 24 6 958 499 346 115 28 chrX 48891839 48892229 -117758067 - L1MB8 LINE L1 -38 6140 5717 6 958 215 309 29 0 chrX 48892440 48892508 -117757788 + ID4 SINE ID 13 82 -1 6 958 183 329 105 64 chrX 48893323 48893495 -117756801 - MIRc SINE MIR -7 261 83 6 958 240 326 33 0 chrX 48894199 48894291 -117756005 + MIRb SINE MIR 121 215 -53 6 958 370 299 147 15 chrX 48896664 48896800 -117753496 + L2b LINE L2 3217 3370 -5 6 958 285 51 0 0 chrX 48896929 48896968 -117753328 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 958 240 200 0 0 chrX 48898672 48898732 -117751564 + (TG)n Simple_repeat Simple_repeat 1 60 0 6 958 23 33 0 0 chrX 48899126 48899156 -117751140 + AT_rich Low_complexity Low_complexity 1 30 0 6 958 627 14 0 0 chrX 48899562 48899634 -117750662 + (TCCC)n Simple_repeat Simple_repeat 4 75 0 6 958 374 247 44 11 chrX 48900133 48900223 -117750073 + PB1D10 SINE Alu 1 93 -24 6 958 195 333 30 10 chrX 48900256 48900356 -117749940 + MIRb SINE MIR 161 262 -6 6 958 3020 113 11 38 chrX 48900485 48900963 -117749333 - MT2C_Mm LTR ERVL -10 465 1 6 958 524 193 0 0 chrX 48901600 48901688 -117748608 + polypurine Low_complexity Low_complexity 3 90 0 6 958 1302 56 0 0 chrX 48902236 48902416 -117747880 + (TC)n Simple_repeat Simple_repeat 1 180 0 6 958 195 262 0 0 chrX 48902633 48902675 -117747621 + L3 LINE CR1 4447 4488 -1 6 958 605 307 49 24 chrX 48903160 48903407 -117746889 - MER58B DNA MER1_type -27 314 62 6 958 251 419 8 0 chrX 48903634 48903751 -117746545 - MIRm SINE MIR -140 136 19 6 958 369 0 0 0 chrX 48903947 48903988 -117746308 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 958 528 332 53 49 chrX 48904461 48904724 -117745572 + MTEa LTR MaLR 114 377 -2 6 958 1060 111 103 17 chrX 48904884 48905058 -117745238 + B2_Mm2 SINE B2 1 189 -6 6 958 652 223 46 92 chrX 48905427 48905600 -117744696 + ORR1D1 LTR MaLR 17 181 -193 6 958 530 150 33 0 chrX 48905600 48905720 -117744576 + CT-rich Low_complexity Low_complexity 1 124 0 6 958 356 173 99 0 chrX 48905722 48905803 -117744493 + ORR1D1 LTR MaLR 166 254 -120 6 958 202 371 122 39 chrX 48907587 48907873 -117742423 + L2b LINE L2 3033 3342 -33 6 958 477 358 25 17 chrX 48907946 48908185 -117742111 - MIR SINE MIR -2 260 20 6 958 416 310 86 11 chrX 48908486 48908672 -117741624 + L1MB8 LINE L1 5972 6171 -7 6 958 333 256 0 12 chrX 48908857 48908940 -117741356 - ID4 SINE ID -1 82 1 6 958 270 0 0 0 chrX 48910621 48910651 -117739645 + (TC)n Simple_repeat Simple_repeat 2 31 0 6 958 240 275 72 0 chrX 48910699 48910768 -117739528 + MTE2b LTR MaLR 1 74 -305 6 958 508 282 8 8 chrX 48910757 48910889 -117739407 - B1F SINE Alu -17 132 1 6 958 976 39 5 53 chrX 48911171 48911360 -117738936 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 958 357 344 54 18 chrX 48911556 48911722 -117738574 + MIR SINE MIR 19 190 -72 6 958 260 317 144 18 chrX 48912071 48912238 -117738058 + MIR SINE MIR 53 240 -22 6 958 726 171 32 26 chrX 48914012 48914168 -117736128 + RMER10B LTR ERVL 196 352 -46 6 958 186 133 0 0 chrX 48914168 48914198 -117736098 + (A)n Simple_repeat Simple_repeat 1 30 0 6 958 252 0 0 0 chrX 48914374 48914402 -117735894 + (TA)n Simple_repeat Simple_repeat 2 29 0 6 958 277 351 15 0 chrX 48914417 48914548 -117735748 - MIR SINE MIR -1 261 129 6 958 283 226 120 63 chrX 48915511 48915686 -117734610 - Lx9 LINE L1 0 7644 7460 6 958 537 186 28 14 chrX 48915684 48915826 -117734470 - Lx9 LINE L1 -121 7523 7380 6 958 247 269 62 52 chrX 48916778 48916892 -117733404 + MIRb SINE MIR 38 152 -124 6 958 213 321 93 23 chrX 48917246 48917332 -117732964 + MIRm SINE MIR 101 192 -84 6 958 386 256 188 29 chrX 48917938 48918215 -117732081 + MER33 DNA MER1_type 2 322 -2 6 958 4367 22 0 0 chrX 48919839 48920332 -117729964 + MT2_Mm LTR ERVL 1 493 0 6 958 45317 15 6 0 chrX 48920332 48925658 -117724638 + MERVL-int LTR ERVL 1 5360 -125 6 958 360 191 46 35 chrX 48925658 48925745 -117724551 + ORR1A3-int LTR MaLR 553 640 -1323 6 958 302 0 0 0 chrX 48925745 48925783 -117724513 + MERVL-int LTR ERVL 5448 5485 0 6 958 4368 22 0 0 chrX 48925783 48926276 -117724020 + MT2_Mm LTR ERVL 1 493 0 6 958 594 285 0 0 chrX 48926528 48926658 -117723638 + B1F2 SINE Alu 8 137 -12 6 958 949 193 5 5 chrX 48926951 48927144 -117723152 + Lx7 LINE L1 6804 6996 -700 6 958 1041 179 44 32 chrX 48927147 48927395 -117722901 + Lx7 LINE L1 7445 7695 -1 6 958 372 296 34 7 chrX 48927689 48927835 -117722461 + L1M5 LINE L1 5547 5696 -428 6 958 291 54 0 0 chrX 48930396 48930433 -117719863 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 958 679 228 10 0 chrX 48930488 48930626 -117719670 + B1F SINE Alu 4 144 -5 6 958 322 321 58 91 chrX 48930626 48930637 -117719659 + B4A SINE B4 89 232 -60 6 958 1033 142 67 19 chrX 48930644 48930852 -117719444 + Lx2 LINE L1 6780 6997 0 6 958 21 0 0 0 chrX 48930853 48930874 -117719422 + AT_rich Low_complexity Low_complexity 1 21 0 6 958 315 309 30 43 chrX 48930973 48931206 -117719090 - L1MB8 LINE L1 -9 6169 5940 6 958 477 34 0 0 chrX 48931244 48931303 -117718993 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 958 320 216 40 26 chrX 48931366 48931442 -117718854 + ID4_ SINE ID 7 83 0 6 958 215 333 51 51 chrX 48931442 48931464 -117718832 + B4 SINE B4 9 106 -186 6 958 621 106 0 0 chrX 48935850 48935963 -117714333 + (TC)n Simple_repeat Simple_repeat 2 114 0 6 958 561 52 0 0 chrX 48935963 48936040 -117714256 + (CA)n Simple_repeat Simple_repeat 1 77 0 6 958 206 296 0 0 chrX 48937326 48937380 -117712916 + CT-rich Low_complexity Low_complexity 5 58 0 6 958 213 182 0 0 chrX 48937333 48937366 -117712930 + polypyrimidine Low_complexity Low_complexity 4 36 0 6 958 1260 259 61 6 chrX 48939632 48939959 -117710337 - MER2 DNA MER2_type 0 345 1 6 958 7108 58 3 10 chrX 48940903 48942138 -117708158 - L1Md_F2 LINE L1 0 6582 5359 6 958 208 276 50 121 chrX 48942417 48942516 -117707780 - L2c LINE L2 -5 3382 3291 6 958 236 226 34 68 chrX 48942790 48942937 -117707359 + (TTATA)n Simple_repeat Simple_repeat 1 142 0 6 958 787 310 99 17 chrX 48943714 48944016 -117706280 - MER58B DNA MER1_type -14 327 1 6 958 304 287 78 10 chrX 48944928 48945029 -117705267 - MER20 DNA MER1_type -57 162 55 6 958 699 317 11 11 chrX 48945029 48945193 -117705103 + B3 SINE B2 2 167 -49 6 958 198 0 0 0 chrX 48945193 48945215 -117705081 + (CATA)n Simple_repeat Simple_repeat 4 25 0 6 958 699 317 11 11 chrX 48945215 48945238 -117705058 + B3 SINE B2 168 189 -27 6 958 288 361 0 9 chrX 48945475 48945584 -117704712 - PB1D10 SINE Alu -9 108 1 6 958 483 60 0 0 chrX 48947007 48947074 -117703222 + (CAGAGA)n Simple_repeat Simple_repeat 2 68 0 6 958 1338 70 35 0 chrX 48947831 48948030 -117702266 + L1Md_F2 LINE L1 6375 6580 -2 6 958 214 394 19 9 chrX 48948213 48948318 -117701978 - MIR3 SINE MIR -22 186 81 6 958 745 160 23 46 chrX 48948661 48948792 -117701504 + B1_Mur3 SINE Alu 22 149 0 6 958 278 317 49 140 chrX 48948666 48948809 -117701487 + B4 SINE B4 113 242 -50 6 958 924 143 0 0 chrX 48948811 48948965 -117701331 + (GAA)n Simple_repeat Simple_repeat 3 156 0 6 958 505 300 30 24 chrX 48949027 48949191 -117701105 + RSINE1 SINE B4 1 165 0 6 958 603 0 0 0 chrX 48949204 48949271 -117701025 + (TAGA)n Simple_repeat Simple_repeat 3 69 0 6 958 234 0 0 0 chrX 48949872 48949898 -117700398 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 958 198 71 0 0 chrX 48950486 48950514 -117699782 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 958 211 335 114 8 chrX 48953116 48953310 -117696986 - MIR SINE MIR -6 262 42 6 958 184 386 60 12 chrX 48953270 48953354 -117696942 + L2b LINE L2 3257 3344 -31 6 958 7713 151 18 18 chrX 48954144 48955800 -117694496 - Lx2 LINE L1 0 6997 5343 6 958 1230 12 23 17 chrX 48955948 48956122 -117694174 + (TAGA)n Simple_repeat Simple_repeat 2 176 0 6 958 1003 293 22 15 chrX 48957558 48957828 -117692468 + B4 SINE B4 1 272 -20 6 958 470 98 12 0 chrX 48957829 48957911 -117692385 + (CA)n Simple_repeat Simple_repeat 2 84 0 7 958 286 346 0 0 chrX 48958160 48958238 -117692058 - MER91A DNA Tip100 -109 87 10 7 958 852 177 78 5 chrX 48958429 48958622 -117691674 - Lx5 LINE L1 -3 7047 6841 7 958 975 201 9 28 chrX 48958619 48958834 -117691462 + Lx4B LINE L1 6578 6788 -270 7 958 201 256 0 0 chrX 48959268 48959311 -117690985 + GA-rich Low_complexity Low_complexity 3 45 0 7 958 537 16 0 0 chrX 48960231 48960293 -117690003 + (TG)n Simple_repeat Simple_repeat 2 63 0 7 958 1161 93 75 6 chrX 48960994 48961167 -117689129 - B2_Mm2 SINE B2 -9 186 2 7 958 438 315 76 7 chrX 48961268 48961412 -117688884 + B4 SINE B4 3 156 -136 7 958 391 216 12 0 chrX 48961596 48961758 -117688538 + GA-rich Low_complexity Low_complexity 2 165 0 7 958 203 180 0 20 chrX 48963003 48963022 -117687274 + (CA)n Simple_repeat Simple_repeat 2 19 0 7 958 522 43 0 0 chrX 48963022 48963091 -117687205 + (TC)n Simple_repeat Simple_repeat 2 70 0 7 958 203 180 0 20 chrX 48963091 48963122 -117687174 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 958 428 312 50 38 chrX 48963131 48963291 -117687005 + RSINE1 SINE B4 1 162 -3 7 958 210 37 0 0 chrX 48964516 48964543 -117685753 + (CAA)n Simple_repeat Simple_repeat 1 27 0 7 958 320 319 109 0 chrX 48965769 48965888 -117684408 - MIRb SINE MIR -14 254 123 7 958 205 376 80 30 chrX 48965917 48966117 -117684179 - MIRc SINE MIR -32 236 27 7 958 2467 53 0 0 chrX 48966544 48966844 -117683452 + L1_Mus1 LINE L1 6268 6567 0 7 958 279 0 0 0 chrX 48966885 48966916 -117683380 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 958 23 0 0 0 chrX 48967452 48967475 -117682821 + AT_rich Low_complexity Low_complexity 1 23 0 7 958 233 311 68 0 chrX 48968686 48968760 -117681536 - BC1_Mm scRNA scRNA -64 88 10 7 958 277 246 123 0 chrX 48968796 48968861 -117681435 - ID_B1 SINE B4 -49 175 103 7 958 367 290 30 0 chrX 48968884 48968984 -117681312 - PB1D10 SINE Alu -2 115 13 7 958 590 314 38 5 chrX 48969051 48969243 -117681053 - B3A SINE B2 -13 203 1 7 958 26 30 0 0 chrX 48969410 48969443 -117680853 + AT_rich Low_complexity Low_complexity 1 33 0 7 958 1125 189 193 28 chrX 48969627 48969948 -117680348 + ORR1D1 LTR MaLR 1 374 0 7 958 2300 114 3 0 chrX 48970084 48970425 -117679871 - L1_Mus3 LINE L1 -221 6417 6076 7 958 1439 50 15 10 chrX 48970425 48970627 -117679669 + L1_Mus3 LINE L1 6430 6632 -6 7 958 741 246 107 10 chrX 48970713 48970910 -117679386 + B3 SINE B2 1 216 0 7 958 291 212 184 32 chrX 48971927 48972107 -117678189 + L1MEf LINE L1 1332 1540 -5794 7 958 5492 90 67 5 chrX 48972107 48972899 -117677397 + Lx LINE L1 5807 6647 -7 7 958 443 115 62 0 chrX 48972994 48973090 -117677206 + GA-rich Low_complexity Low_complexity 1 102 0 7 958 300 319 100 14 chrX 48973094 48973234 -117677062 + HAL1-3A_ME LINE L1 2284 2435 -423 7 958 738 314 10 21 chrX 48973264 48973456 -117676840 + B4 SINE B4 103 292 0 7 958 501 255 145 18 chrX 48973560 48973891 -117676405 + L1MEf LINE L1 1812 2184 -4918 7 958 393 318 122 30 chrX 48974011 48974241 -117676055 + L1MEf LINE L1 2204 2454 -4648 7 958 600 291 92 6 chrX 48974507 48974832 -117675464 + L1MB7 LINE L1 5534 5886 -298 7 958 371 368 26 6 chrX 48975093 48975249 -117675047 + MER5A1 DNA MER1_type 7 165 -1 7 958 22 35 0 0 chrX 48975861 48975890 -117674406 + AT_rich Low_complexity Low_complexity 1 29 0 7 958 507 158 82 48 chrX 48975890 48976036 -117674260 + Lx9 LINE L1 7489 7639 -5 7 958 359 260 13 0 chrX 48977024 48977101 -117673195 - ID SINE ID -145 79 2 7 958 22 0 0 0 chrX 48977620 48977642 -117672654 + AT_rich Low_complexity Low_complexity 1 22 0 7 958 363 44 0 0 chrX 48977959 48978004 -117672292 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 958 1193 95 32 5 chrX 48978219 48978409 -117671887 + L1_Mus3 LINE L1 6443 6637 -1 7 958 575 287 146 12 chrX 48978629 48978883 -117671413 + B4A SINE B4 1 288 -4 7 958 317 299 13 89 chrX 48979074 48979232 -117671064 + L1MEc LINE L1 1475 1620 -4780 7 958 21 0 0 0 chrX 48979560 48979581 -117670715 + AT_rich Low_complexity Low_complexity 1 21 0 7 958 1677 24 0 0 chrX 48979679 48979886 -117670410 - L1Md_T LINE L1 -513 6069 5863 7 958 2686 25 0 0 chrX 48979886 48980200 -117670096 + L1Md_A LINE L1 6269 6582 0 7 958 388 301 109 14 chrX 48980282 48980420 -117669876 + MLT1F2 LTR MaLR 1 151 -409 7 958 5513 163 13 3 chrX 48980423 48981855 -117668441 + Lx2B LINE L1 4897 6359 -641 7 958 252 338 0 0 chrX 48982021 48982095 -117668201 - ORR1D1-int LTR MaLR -451 1058 985 7 958 3218 87 75 0 chrX 48982985 48983455 -117666841 - Lx3_Mus LINE L1 -8 7001 6497 7 958 1158 0 7 14 chrX 48983698 48983842 -117666454 + (GGAGA)n Simple_repeat Simple_repeat 2 144 0 7 958 786 123 60 80 chrX 48983897 48984047 -117666249 - B1_Mur4 SINE Alu -2 148 2 7 958 576 274 6 23 chrX 48984189 48984361 -117665935 - ORR1D1-int LTR MaLR -1083 497 329 7 958 378 315 145 30 chrX 48984363 48984494 -117665802 + RSINE1 SINE B4 3 148 -17 7 958 24 0 0 0 chrX 48984566 48984590 -117665706 + AT_rich Low_complexity Low_complexity 1 24 0 7 958 851 282 87 43 chrX 48984594 48984916 -117665380 - ORR1D1-int LTR MaLR -1244 336 1 7 958 403 320 104 78 chrX 48984918 48985253 -117665043 - ORR1D1 LTR MaLR 0 374 31 7 958 791 229 95 18 chrX 48985560 48985845 -117664451 + L1MB8 LINE L1 4896 5202 -944 7 958 1444 299 93 28 chrX 48985967 48986816 -117663480 + L1MB8 LINE L1 5259 6162 -16 7 958 186 43 0 0 chrX 48987181 48987204 -117663092 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 958 303 373 61 12 chrX 48989412 48989575 -117660721 + MIR3 SINE MIR 14 184 -24 7 958 660 225 7 0 chrX 48990199 48990341 -117659955 + B1_Mur2 SINE Alu 2 144 -5 7 958 297 0 0 0 chrX 48990553 48990586 -117659710 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 958 344 324 7 29 chrX 48991317 48991457 -117658839 + B1_Mur1 SINE Alu 5 141 -8 7 958 182 128 43 0 chrX 48992952 48992999 -117657297 + (CAGAGA)n Simple_repeat Simple_repeat 6 54 0 7 958 711 186 24 8 chrX 48993107 48993232 -117657064 + B1_Mur2 SINE Alu 2 128 -21 7 958 1436 315 76 26 chrX 48994158 48995186 -117655110 + L1_Mur3 LINE L1 4661 5739 -141 7 958 203 200 16 48 chrX 48995498 48995561 -117654735 + T-rich Low_complexity Low_complexity 4 64 0 7 958 342 0 0 0 chrX 48995693 48995731 -117654565 + (TGAA)n Simple_repeat Simple_repeat 4 41 0 7 958 471 126 0 0 chrX 48996500 48996595 -117653701 + (TC)n Simple_repeat Simple_repeat 2 96 0 7 958 414 0 0 0 chrX 48996595 48996641 -117653655 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 958 657 0 0 0 chrX 48998689 48998762 -117651534 + (GGGA)n Simple_repeat Simple_repeat 2 74 0 7 958 396 0 0 0 chrX 49002224 49002268 -117648028 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 958 1196 323 53 75 chrX 49002667 49003303 -117646993 + MER21B LTR ERV1 181 802 -61 2 958 207 302 104 78 chrX 49003523 49003581 -117646715 - MIR SINE MIR -72 190 125 3 958 2542 92 3 3 chrX 49003581 49003908 -117646388 - ORR1A2 LTR MaLR 0 327 1 4 958 242 329 56 48 chrX 49003908 49004012 -117646284 - MIRb SINE MIR -138 124 33 3 958 650 266 68 40 chrX 49004247 49004423 -117645873 + ID_B1 SINE B4 1 181 -43 5 958 4468 122 33 0 chrX 49004444 49005078 -117645218 + Lx4A LINE L1 6402 7056 -2 6 958 36 45 0 15 chrX 49005088 49005142 -117645154 + AT_rich Low_complexity Low_complexity 1 54 0 7 958 330 80 0 0 chrX 49005142 49005192 -117645104 + (TTATA)n Simple_repeat Simple_repeat 5 54 0 8 958 36 45 0 15 chrX 49005192 49005205 -117645091 + AT_rich Low_complexity Low_complexity 1 13 0 9 958 183 250 0 0 chrX 49005221 49005289 -117645007 + (TAGA)n Simple_repeat Simple_repeat 3 70 0 1 958 233 222 162 64 chrX 49005308 49005481 -117644815 + RLTR12A LTR ERVK 373 562 -6 1 958 192 315 43 80 chrX 49006387 49006549 -117643747 + L2c LINE L2 3207 3362 -25 1 958 1935 268 56 31 chrX 49006707 49007351 -117642945 + L1MA6 LINE L1 5640 6299 -1 1 958 957 168 0 0 chrX 49007504 49007683 -117642613 + GA-rich Low_complexity Low_complexity 2 180 0 1 958 488 282 15 30 chrX 49007864 49007999 -117642297 + ID_B1 SINE B4 87 219 -5 1 958 425 225 0 12 chrX 49008017 49008098 -117642198 - ID4_ SINE ID -3 80 1 1 958 704 289 102 43 chrX 49008407 49008798 -117641498 + L1MD LINE L1 2294 2707 -3439 1 958 339 240 66 8 chrX 49008810 49008932 -117641364 + L1MD LINE L1 2895 3023 -3123 1 958 428 242 71 16 chrX 49008919 49009045 -117641251 + L1M5 LINE L1 5549 5681 -498 1 958 1155 270 68 58 chrX 49009168 49009565 -117640731 - MTD LTR MaLR 0 419 19 1 958 1155 320 44 66 chrX 49009979 49010635 -117639661 + L1MDb LINE L1 393 1011 -5398 2 958 1801 231 17 22 chrX 49010746 49011153 -117639143 - MTD LTR MaLR -14 405 1 2 958 329 179 164 0 chrX 49011255 49011322 -117638974 + ID4_ SINE ID 4 81 -2 2 958 1172 350 56 27 chrX 49011371 49011996 -117638300 + L1M4b LINE L1 98 740 -6594 2 958 436 202 26 0 chrX 49011998 49012112 -117638184 + CT-rich Low_complexity Low_complexity 4 120 0 2 958 775 241 18 32 chrX 49012112 49012331 -117637965 - B3 SINE B2 0 216 1 2 958 234 228 88 0 chrX 49012664 49012721 -117637575 - B3 SINE B2 -150 66 5 2 958 379 193 12 0 chrX 49012810 49012893 -117637403 + L1M4b LINE L1 2284 2367 -4967 2 958 290 123 30 30 chrX 49012894 49012961 -117637335 + B3 SINE B2 149 215 -1 2 958 1924 151 72 12 chrX 49013114 49013449 -117636847 - MTC LTR MaLR -66 355 1 2 958 460 275 86 14 chrX 49013460 49013670 -117636626 + L1M4b LINE L1 4591 4815 -2191 2 958 250 311 16 0 chrX 49013667 49013789 -117636507 + L1M4b LINE L1 5118 5241 -1765 2 958 452 293 40 8 chrX 49013861 49013985 -117636311 + ID_B1 SINE B4 91 218 -6 2 958 309 242 184 77 chrX 49013986 49014415 -117635881 + L1M4b LINE L1 5245 5719 -1287 2 958 884 254 67 5 chrX 49014463 49014657 -117635639 + B3 SINE B2 1 206 -10 3 958 653 237 50 67 chrX 49014758 49014815 -117635481 + L1M4b LINE L1 5971 6028 -978 2 958 616 223 0 0 chrX 49014815 49014927 -117635369 + PB1D9 SINE Alu 2 113 -7 3 958 653 239 50 63 chrX 49014927 49015189 -117635107 + L1M4b LINE L1 6029 6285 -759 2 958 22 0 0 0 chrX 49015357 49015379 -117634917 + AT_rich Low_complexity Low_complexity 1 22 0 3 958 975 223 122 14 chrX 49015389 49015676 -117634620 + L1MB5 LINE L1 5850 6167 -7 3 958 436 265 93 152 chrX 49015668 49015932 -117634364 + L1M4b LINE L1 6328 6573 -646 2 958 405 0 0 0 chrX 49015958 49016003 -117634293 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 958 577 296 29 32 chrX 49016015 49016193 -117634103 - B3A SINE B2 -35 181 1 3 958 263 107 0 35 chrX 49016255 49016313 -117633983 + (TCTG)n Simple_repeat Simple_repeat 2 57 0 3 958 512 15 0 15 chrX 49016316 49016382 -117633914 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 958 314 347 89 24 chrX 49016396 49016520 -117633776 - RSINE1 SINE B4 -19 146 15 3 958 1181 221 0 0 chrX 49016782 49016990 -117633306 + B3 SINE B2 1 208 -8 3 958 1596 50 16 0 chrX 49016990 49017172 -117633124 - B2_Mm2 SINE B2 -10 185 1 4 958 817 270 113 29 chrX 49017187 49017760 -117632536 + L1MD LINE L1 4975 5609 -750 4 958 493 307 70 54 chrX 49018339 49018525 -117631771 + ID_B1 SINE B4 16 204 -20 4 958 530 29 15 0 chrX 49018525 49018593 -117631703 + (GA)n Simple_repeat Simple_repeat 1 69 0 4 958 350 173 0 13 chrX 49018593 49018669 -117631627 + GA-rich Low_complexity Low_complexity 2 76 0 4 959 3545 70 7 2 chrX 49021205 49021651 -117628645 - L1_Mus3 LINE L1 -6 6632 6185 4 959 415 271 134 37 chrX 49021793 49021927 -117628369 - B4A SINE B4 -85 207 61 4 959 328 194 21 11 chrX 49022089 49022183 -117628113 + GA-rich Low_complexity Low_complexity 6 100 0 4 959 208 206 20 45 chrX 49022192 49022270 -117628026 + MIRc SINE MIR 132 211 -57 4 959 1239 48 7 0 chrX 49022427 49022573 -117627723 + B1_Mus2 SINE Alu 1 147 0 4 959 1062 144 0 0 chrX 49022593 49022773 -117627523 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 959 571 187 69 126 chrX 49022974 49023119 -117627177 + B1_Mur4 SINE Alu 1 137 -13 5 959 575 62 12 0 chrX 49023119 49023199 -117627097 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 5 959 571 187 69 126 chrX 49023199 49023212 -117627084 + B1_Mur4 SINE Alu 138 150 0 5 959 395 257 0 26 chrX 49023214 49023290 -117627006 + B3A SINE B2 27 100 -98 5 959 1314 48 0 0 chrX 49023295 49023442 -117626854 + B1_Mus2 SINE Alu 1 147 0 5 959 358 281 40 40 chrX 49023481 49023581 -117626715 + B3A SINE B2 99 198 0 5 959 28 0 0 0 chrX 49025613 49025641 -117624655 + AT_rich Low_complexity Low_complexity 1 28 0 5 959 622 242 0 50 chrX 49025993 49026132 -117624164 - B1_Mur1 SINE Alu -6 143 12 5 959 220 307 66 13 chrX 49026402 49026478 -117623818 + L2b LINE L2 3296 3375 0 5 959 334 191 0 0 chrX 49026581 49026644 -117623652 - ID4 SINE ID -4 79 17 5 959 217 325 36 12 chrX 49027774 49027858 -117622438 - MIR3 SINE MIR -29 179 94 5 959 811 286 45 90 chrX 49028578 49028954 -117621342 + ORR1E LTR MaLR 1 359 0 6 959 1048 234 24 5 chrX 49028974 49029184 -117621112 + B3 SINE B2 1 214 -2 6 959 306 318 43 23 chrX 49030536 49030696 -117619600 + MIRc SINE MIR 3 173 -95 6 959 320 316 0 30 chrX 49032465 49032566 -117617730 + polypurine Low_complexity Low_complexity 6 103 0 6 959 283 195 141 14 chrX 49035276 49035355 -117614941 - MIRm SINE MIR -134 142 48 6 959 301 322 32 51 chrX 49035777 49035934 -117614362 + MIRc SINE MIR 47 200 -68 6 959 387 0 0 0 chrX 49036711 49036754 -117613542 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 959 656 171 94 0 chrX 49036957 49037074 -117613222 + RSINE1 SINE B4 2 129 -36 6 959 369 0 0 0 chrX 49037104 49037145 -117613151 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 959 537 312 28 0 chrX 49037190 49037334 -117612962 - B1_Mur1 SINE Alu -1 148 1 6 959 442 253 32 0 chrX 49037334 49037425 -117612871 + RMER30 DNA MER1_type 105 198 -4 7 959 323 263 72 21 chrX 49039968 49040065 -117610231 + MIR3 SINE MIR 72 173 -35 7 959 644 273 23 35 chrX 49040293 49040464 -117609832 + B3 SINE B2 48 216 0 7 959 762 259 48 10 chrX 49040496 49040703 -117609593 + B3 SINE B2 2 216 0 7 959 398 219 9 79 chrX 49040738 49040852 -117609444 + MT2B LTR ERVL 153 258 -343 7 959 750 163 8 0 chrX 49040755 49040878 -117609418 + B1_Mus1 SINE Alu 7 130 -18 7 959 180 0 0 0 chrX 49041038 49041058 -117609238 + (GCCTG)n Simple_repeat Simple_repeat 3 22 0 7 959 643 264 0 0 chrX 49041214 49041335 -117608961 + RSINE1 SINE B4 32 152 -13 7 959 31 0 0 0 chrX 49041399 49041430 -117608866 + AT_rich Low_complexity Low_complexity 1 31 0 7 959 1544 102 76 13 chrX 49042562 49042800 -117607496 - Lx2B LINE L1 -9 6991 6739 7 959 237 333 0 0 chrX 49043097 49043169 -117607127 - MIRc SINE MIR -101 167 96 8 959 434 223 26 25 chrX 49043686 49043818 -117606478 - L1MA4 LINE L1 -381 5919 5785 8 959 378 0 0 0 chrX 49043835 49043877 -117606419 + (TA)n Simple_repeat Simple_repeat 1 42 0 8 959 3604 35 2 0 chrX 49043877 49044271 -117606025 - MTA_Mm LTR MaLR -1 395 1 8 959 9359 49 5 4 chrX 49044271 49045368 -117604928 - MTA_Mm-int LTR MaLR 0 1098 1 8 959 3575 35 5 0 chrX 49045368 49045762 -117604534 - MTA_Mm LTR MaLR 0 396 1 8 959 186 189 0 0 chrX 49045762 49045799 -117604497 + (CACG)n Simple_repeat Simple_repeat 3 39 0 8 959 393 177 0 0 chrX 49045799 49045878 -117604418 + (TA)n Simple_repeat Simple_repeat 1 79 0 8 959 341 236 86 20 chrX 49045885 49046036 -117604260 - L1MA4 LINE L1 -470 5827 5667 8 959 201 158 0 0 chrX 49046245 49046283 -117604013 + T-rich Low_complexity Low_complexity 1 38 0 8 959 207 0 0 0 chrX 49047475 49047498 -117602798 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 959 333 288 62 74 chrX 49047709 49047885 -117602411 + MIRb SINE MIR 3 176 -92 8 959 399 323 90 18 chrX 49047953 49048120 -117602176 - MIR3 SINE MIR -23 185 7 8 959 250 172 52 0 chrX 49048431 49048489 -117601807 - L1ME3 LINE L1 -199 5963 5903 9 959 686 300 78 4 chrX 49048490 49048721 -117601575 - MLT1E LTR MaLR -2 651 404 9 959 506 215 0 0 chrX 49048878 49048971 -117601325 - B1_Mur3 SINE Alu -29 120 28 9 959 1059 266 109 4 chrX 49049190 49049447 -117600849 + B4 SINE B4 2 285 -7 9 959 263 271 107 99 chrX 49049705 49049836 -117600460 + L2a LINE L2 3258 3389 -37 9 959 24 0 0 0 chrX 49049889 49049913 -117600383 + AT_rich Low_complexity Low_complexity 1 24 0 9 959 215 0 0 62 chrX 49050498 49050530 -117599766 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 9 959 324 218 47 82 chrX 49050532 49050617 -117599679 - PB1D7 SINE Alu -2 118 37 9 959 261 98 0 0 chrX 49050649 49050690 -117599606 + (TGG)n Simple_repeat Simple_repeat 1 41 0 9 959 207 0 0 0 chrX 49050691 49050714 -117599582 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 959 239 311 0 75 chrX 49050714 49050794 -117599502 - ID4_ SINE ID -6 77 4 1 959 311 261 10 52 chrX 49050798 49050895 -117599401 + MER3 DNA MER1_type 117 209 0 1 959 268 253 53 32 chrX 49052117 49052211 -117598085 + MIRb SINE MIR 65 160 -108 1 959 252 0 0 0 chrX 49052306 49052334 -117597962 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 959 209 216 0 0 chrX 49052368 49052405 -117597891 + L2c LINE L2 3331 3367 -20 1 959 182 138 0 0 chrX 49052379 49052408 -117597888 + MIRm SINE MIR 233 261 -15 1 959 264 296 51 0 chrX 49052731 49052757 -117597539 - BC1_Mm scRNA scRNA -49 103 25 1 959 294 258 15 0 chrX 49052757 49052823 -117597473 - tRNA-Ala-GCY_ tRNA tRNA -8 67 1 1 959 281 235 161 29 chrX 49053764 49053892 -117596404 - MIR SINE MIR -79 183 48 1 959 1660 207 87 39 chrX 49053913 49054113 -117596183 - ORR1D1 LTR MaLR 0 374 185 1 959 432 0 0 0 chrX 49054113 49054161 -117596135 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 959 1660 207 87 39 chrX 49054161 49054317 -117595979 - ORR1D1 LTR MaLR -190 184 1 1 959 305 168 156 9 chrX 49054620 49054695 -117595601 - B3A SINE B2 -114 81 1 1 959 547 307 0 0 chrX 49055404 49055544 -117594752 + B1F2 SINE Alu 2 141 -8 1 959 638 58 11 0 chrX 49055551 49055638 -117594658 + (TTCC)n Simple_repeat Simple_repeat 1 88 0 1 959 231 202 0 83 chrX 49055640 49055696 -117594600 - ID4 SINE ID -20 63 12 1 959 501 283 16 58 chrX 49056068 49056259 -117594037 + MamGypLTR2c LTR Gypsy 850 1032 -36 1 959 295 325 92 35 chrX 49056506 49056790 -117593506 - Lx8 LINE L1 -4 7469 7170 1 959 1234 206 88 124 chrX 49056795 49057183 -117593113 - MTE2a LTR MaLR -4 375 2 1 959 473 256 0 43 chrX 49057457 49057551 -117592745 + RSINE1 SINE B4 59 148 -17 1 959 306 0 0 0 chrX 49057574 49057608 -117592688 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 959 772 231 81 0 chrX 49057889 49058075 -117592221 + B3 SINE B2 1 201 -15 1 959 446 250 18 111 chrX 49058265 49058436 -117591860 + RSINE1 SINE B4 11 165 0 1 959 1070 88 0 0 chrX 49059922 49060058 -117590238 + B1_Mus1 SINE Alu 2 137 -11 1 959 1229 79 17 0 chrX 49060374 49060551 -117589745 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 1 959 1328 86 37 0 chrX 49060710 49060897 -117589399 + B2_Mm2 SINE B2 1 194 -1 1 959 763 216 48 16 chrX 49060905 49061093 -117589203 + B3A SINE B2 1 194 -4 1 959 220 269 112 25 chrX 49061111 49061191 -117589105 + L2c LINE L2 3300 3386 -1 1 959 268 308 65 11 chrX 49062574 49062666 -117587630 - PB1 SINE Alu -30 97 1 1 959 384 273 45 65 chrX 49063167 49063367 -117586929 - L1MD3 LINE L1 -84 7911 7716 1 959 428 286 67 17 chrX 49064636 49064814 -117585482 + L1M5 LINE L1 5519 5705 -419 1 959 603 183 9 75 chrX 49064840 49064970 -117585326 + B1_Mur3 SINE Alu 1 117 -3 1 959 207 100 0 0 chrX 49064970 49065000 -117585296 + (CAAG)n Simple_repeat Simple_repeat 2 31 0 1 959 932 205 27 45 chrX 49065005 49065225 -117585071 + B3 SINE B2 1 216 0 1 959 329 361 0 43 chrX 49065245 49065384 -117584912 + B1F SINE Alu 1 133 -16 1 959 212 246 0 0 chrX 49065385 49065411 -117584885 + T-rich Low_complexity Low_complexity 32 57 0 1 959 701 88 26 0 chrX 49065411 49065524 -117584772 - Lx3C LINE L1 0 6976 6861 1 959 212 246 0 0 chrX 49065524 49065554 -117584742 + T-rich Low_complexity Low_complexity 2 31 0 1 959 1143 75 0 26 chrX 49065555 49065569 -117584727 - B1_Mus1 SINE Alu 0 148 138 1 959 279 0 0 0 chrX 49065569 49065600 -117584696 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 959 1143 75 0 26 chrX 49065600 49065736 -117584560 - B1_Mus1 SINE Alu -11 137 2 1 959 228 122 0 0 chrX 49065813 49065854 -117584442 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 1 959 619 274 7 0 chrX 49065854 49066000 -117584296 - B1_Mur2 SINE Alu 0 149 3 1 959 596 286 105 52 chrX 49066312 49066655 -117583641 + RLTR9A LTR ERVK 8 368 0 1 959 698 216 7 28 chrX 49066655 49066794 -117583502 + ID_B1 SINE B4 83 218 -6 1 959 232 191 64 0 chrX 49066752 49066799 -117583497 + PB1D10 SINE Alu 67 116 -1 1 959 1158 286 88 12 chrX 49066804 49067222 -117583074 + Lx8 LINE L1 6805 7254 -219 1 959 462 306 13 58 chrX 49067693 49067849 -117582447 + RSINE1 SINE B4 1 149 -16 1 959 1225 48 0 0 chrX 49069407 49069553 -117580743 + B1_Mus1 SINE Alu 2 147 -1 1 959 432 86 0 0 chrX 49069554 49069624 -117580672 + (CAAAA)n Simple_repeat Simple_repeat 1 70 0 1 959 34 55 0 0 chrX 49069777 49069832 -117580464 + AT_rich Low_complexity Low_complexity 1 55 0 1 959 378 231 0 0 chrX 49069983 49070074 -117580222 + CT-rich Low_complexity Low_complexity 4 94 0 1 959 293 260 0 27 chrX 49070076 49070151 -117580145 - ID_B1 SINE B4 0 224 152 1 959 210 224 73 15 chrX 49070090 49070158 -117580138 - B1_Mm SINE Alu -12 135 64 1 959 474 310 42 54 chrX 49070347 49070515 -117579781 - B4 SINE B4 -46 246 81 1 959 590 234 65 7 chrX 49070615 49070753 -117579543 - ID_B1 SINE B4 -67 157 12 1 959 842 113 0 8 chrX 49071535 49071669 -117578627 + (TTC)n Simple_repeat Simple_repeat 2 134 0 1 959 980 118 0 20 chrX 49071677 49071824 -117578472 - B1_Mus1 SINE Alu -3 145 2 1 959 1064 212 19 9 chrX 49073874 49074088 -117576208 - B3 SINE B2 0 216 1 1 959 237 83 0 0 chrX 49074421 49074457 -117575839 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 1 959 520 241 103 150 chrX 49076534 49076597 -117573699 + ID SINE ID 2 56 -168 1 959 237 33 0 0 chrX 49076597 49076627 -117573669 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1 959 5160 93 21 3 chrX 49076627 49077346 -117572950 - Lx3_Mus LINE L1 -17 6992 6261 1 959 520 241 103 150 chrX 49077346 49077515 -117572781 + ID_B1 SINE B4 57 223 -1 1 959 301 262 12 36 chrX 49077519 49077602 -117572694 + polypurine Low_complexity Low_complexity 1 81 0 1 959 324 222 0 0 chrX 49078522 49078585 -117571711 + MTE2b LTR MaLR 37 99 -280 1 959 832 253 25 15 chrX 49078602 49078803 -117571493 + MTE2b LTR MaLR 177 379 0 1 959 458 61 15 0 chrX 49079318 49079384 -117570912 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 959 925 298 92 64 chrX 49079516 49079986 -117570310 - Lx9 LINE L1 -678 6966 6484 1 959 321 89 0 0 chrX 49081315 49081360 -117568936 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 959 732 270 79 93 chrX 49081364 49081642 -117568654 - B4 SINE B4 -14 278 5 1 959 1663 72 9 13 chrX 49082472 49082697 -117567599 - L1Md_F2 LINE L1 -11 6571 6348 1 959 33872 35 0 0 chrX 49082700 49087925 -117562371 + L1Md_T LINE L1 268 5589 -297 1 959 8967 8 0 0 chrX 49087925 49088921 -117561375 + L1Md_T LINE L1 5590 6585 0 1 959 372 41 0 0 chrX 49088922 49088971 -117561325 - L1_Mus2 LINE L1 -214 6352 6304 1 959 350 267 0 65 chrX 49089207 49089299 -117560997 - RMER30 DNA MER1_type -10 192 107 1 959 204 67 0 0 chrX 49089299 49089329 -117560967 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1 959 442 243 94 44 chrX 49089697 49089878 -117560418 + LTR41B LTR ERVL 1 190 -568 1 959 581 334 100 35 chrX 49089963 49090394 -117559902 + ERVL-E-int LTR ERVL 3967 4425 -1242 1 959 580 292 81 81 chrX 49090762 49090968 -117559328 + B4A SINE B4 5 205 -87 1 959 1866 45 0 12 chrX 49090968 49091214 -117559082 + L1Md_F2 LINE L1 6340 6582 0 1 959 580 292 81 81 chrX 49091214 49091279 -117559017 + B4A SINE B4 206 276 -16 1 959 858 224 27 67 chrX 49091319 49091544 -117558752 - B3A SINE B2 0 216 1 1 959 324 239 90 0 chrX 49091651 49091718 -117558578 + B4 SINE B4 19 91 -201 1 959 880 311 89 66 chrX 49091945 49092430 -117557866 - MER92B LTR ERV1 -77 559 64 1 959 244 299 12 83 chrX 49092437 49092521 -117557775 + PB1D10 SINE Alu 5 82 -35 1 959 5280 131 121 58 chrX 49092625 49093668 -117556628 - RLTR13D3 LTR ERVK -3 1111 3 1 959 464 32 0 16 chrX 49093668 49093731 -117556565 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 959 914 90 34 20 chrX 49093731 49093851 -117556445 + RLTR13C1 LTR ERVK 556 675 -308 1 959 450 0 0 0 chrX 49093851 49093901 -117556395 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 959 914 90 34 20 chrX 49093901 49093927 -117556369 + RLTR13C1 LTR ERVK 676 704 -279 1 959 1165 269 52 6 chrX 49093929 49094254 -117556042 + Lx9 LINE L1 6367 6706 -938 1 959 1305 75 8 4 chrX 49094267 49094520 -117555776 + (TTTC)n Simple_repeat Simple_repeat 1 253 0 1 959 444 82 0 0 chrX 49094522 49094583 -117555713 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 1 959 381 212 175 39 chrX 49094583 49094686 -117555610 - PB1D10 SINE Alu 0 117 1 1 959 228 153 0 48 chrX 49094873 49094935 -117555361 + T-rich Low_complexity Low_complexity 2 60 0 1 959 563 157 0 0 chrX 49094960 49095043 -117555253 - B3 SINE B2 -107 109 27 1 959 1283 43 0 24 chrX 49095064 49095232 -117555064 - L1_Mus1 LINE L1 0 6567 6404 1 959 549 258 109 109 chrX 49095328 49095511 -117554785 - B3A SINE B2 -10 183 1 1 959 254 0 42 42 chrX 49095709 49095757 -117554539 + (ATATG)n Simple_repeat Simple_repeat 1 48 0 1 959 295 159 71 0 chrX 49096318 49096431 -117553865 + (TA)n Simple_repeat Simple_repeat 2 122 0 1 959 221 120 0 39 chrX 49096421 49096473 -117553823 + (TATAA)n Simple_repeat Simple_repeat 5 54 0 1 959 761 98 15 0 chrX 49096498 49096631 -117553665 + (CATATA)n Simple_repeat Simple_repeat 4 138 0 1 959 530 245 50 14 chrX 49096694 49096835 -117553461 + B3A SINE B2 33 178 -20 1 959 920 231 38 5 chrX 49096874 49097036 -117553260 + B3 SINE B2 1 163 -53 1 959 585 0 0 0 chrX 49097036 49097101 -117553195 + (TATATG)n Simple_repeat Simple_repeat 5 69 0 1 959 920 231 38 5 chrX 49097101 49097147 -117553149 + B3 SINE B2 164 215 -1 1 959 555 231 43 10 chrX 49097168 49097337 -117552959 + B3A SINE B2 2 184 -9 1 959 264 77 26 0 chrX 49098210 49098249 -117552047 + Lx3C LINE L1 6315 6354 -622 1 959 1212 130 100 0 chrX 49098249 49098480 -117551816 + Lx3C LINE L1 6723 6976 0 1 959 3162 48 10 2 chrX 49098932 49099325 -117550971 - MTA_Mm LTR MaLR 0 396 1 2 959 921 250 46 0 chrX 49099364 49099560 -117550736 + B3 SINE B2 12 216 0 2 959 181 317 24 24 chrX 49099636 49099720 -117550576 + L4 LINE RTE 1473 1556 -473 2 959 863 300 134 32 chrX 49099856 49100182 -117550114 + MLT2C2 LTR ERVL 1 372 -92 2 959 1062 303 66 24 chrX 49100182 49100679 -117549617 - MLT2B1 LTR ERVL 0 520 3 2 959 863 300 134 32 chrX 49100679 49100762 -117549534 + MLT2C2 LTR ERVL 373 451 -13 2 959 447 303 27 33 chrX 49100996 49101146 -117549150 - B4A SINE B4 0 292 144 2 959 399 340 78 47 chrX 49102596 49102952 -117547344 - LTR41B LTR ERVL -353 405 3 2 959 248 322 35 0 chrX 49103491 49103578 -117546718 + MLT1D LTR MaLR 98 187 -440 2 959 930 127 134 0 chrX 49103619 49103776 -117546520 + B2_Mm1t SINE B2 2 179 -14 2 959 468 76 327 19 chrX 49103827 49103934 -117546362 + B2_Mm2 SINE B2 47 186 -9 2 959 499 306 154 9 chrX 49103936 49104167 -117546129 + MLT1D LTR MaLR 246 497 -8 2 959 22 0 0 0 chrX 49104255 49104277 -117546019 + AT_rich Low_complexity Low_complexity 1 22 0 2 959 476 238 38 0 chrX 49104442 49104547 -117545749 + PB1D9 SINE Alu 2 110 -10 2 959 240 130 0 0 chrX 49105064 49105110 -117545186 + (T)n Simple_repeat Simple_repeat 1 46 0 2 959 889 27 9 0 chrX 49105113 49105223 -117545073 - B1_Mus1 SINE Alu 0 148 38 2 959 223 346 142 19 chrX 49105278 49105384 -117544912 + PB1D9 SINE Alu 1 119 -1 2 959 577 195 24 71 chrX 49111869 49111941 -117538355 - B1_Mus2 SINE Alu -26 121 53 2 959 1455 68 5 0 chrX 49111941 49112131 -117538165 - B2_Mm1t SINE B2 -2 191 1 2 959 577 195 24 71 chrX 49112131 49112185 -117538111 - B1_Mus2 SINE Alu -95 52 1 2 959 581 267 20 7 chrX 49112457 49112604 -117537692 + B1_Mur2 SINE Alu 1 149 0 2 959 7137 106 53 25 chrX 49112711 49113848 -117536448 + Lx3B LINE L1 5799 6967 -6 2 959 579 248 36 0 chrX 49113913 49114050 -117536246 + B1F SINE Alu 1 142 -7 2 959 297 303 0 0 chrX 49114292 49114358 -117535938 - tRNA-Ala-GCA tRNA tRNA -9 66 1 2 959 343 234 39 0 chrX 49115074 49115151 -117535145 + ID4_ SINE ID 2 81 -2 2 959 660 325 80 33 chrX 49115228 49115502 -117534794 + B4 SINE B4 6 292 0 2 959 419 0 20 0 chrX 49115530 49115581 -117534715 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 959 340 123 27 0 chrX 49115581 49115654 -117534642 + GA-rich Low_complexity Low_complexity 1 75 0 2 959 227 284 20 129 chrX 49116255 49116356 -117533940 + B3A SINE B2 109 198 0 2 959 424 264 23 91 chrX 49116414 49116589 -117533707 + RSINE1 SINE B4 3 165 0 2 959 396 289 41 75 chrX 49117902 49118048 -117532248 - B3 SINE B2 -24 192 52 2 959 568 273 7 43 chrX 49118069 49118207 -117532089 + ID_B1 SINE B4 87 219 -5 2 959 1114 74 0 20 chrX 49119666 49119818 -117530478 + B1_Mur4 SINE Alu 2 150 0 2 959 294 95 0 0 chrX 49119818 49119860 -117530436 + (A)n Simple_repeat Simple_repeat 1 42 0 2 959 996 284 35 29 chrX 49121129 49121506 -117528790 + Lx6 LINE L1 6970 7348 -112 2 959 1671 55 8 20 chrX 49123905 49124158 -117526138 + L1Md_A LINE L1 5350 5615 -829 2 959 8876 11 0 1 chrX 49124158 49125155 -117525141 + L1Md_A LINE L1 5587 6582 0 2 959 381 309 28 42 chrX 49126179 49126321 -117523975 + B1F SINE Alu 10 149 0 2 959 344 257 6 98 chrX 49126330 49126429 -117523867 + ID4 SINE ID 4 101 -51 2 959 418 350 129 14 chrX 49126506 49126645 -117523651 + RSINE1 SINE B4 3 157 -8 2 959 25 0 0 0 chrX 49126674 49126699 -117523597 + AT_rich Low_complexity Low_complexity 1 25 0 2 959 199 340 37 55 chrX 49126859 49126968 -117523328 - L4 LINE RTE -789 1240 1134 2 959 21 0 0 0 chrX 49127513 49127534 -117522762 + AT_rich Low_complexity Low_complexity 1 21 0 2 959 383 297 77 46 chrX 49128868 49129062 -117521234 - MLT1A LTR MaLR -10 380 181 2 959 426 285 83 64 chrX 49129095 49129280 -117521016 - MLT1A LTR MaLR -213 195 21 2 959 496 304 48 0 chrX 49129503 49129628 -117520668 + ID_B1 SINE B4 86 216 -8 2 959 1148 69 7 0 chrX 49129653 49129797 -117520499 + B1_Mus1 SINE Alu 2 146 -2 2 959 243 0 0 0 chrX 49129797 49129824 -117520472 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 959 216 135 0 0 chrX 49130348 49130385 -117519911 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 959 207 0 0 0 chrX 49131396 49131419 -117518877 + (A)n Simple_repeat Simple_repeat 1 23 0 2 959 1897 221 120 24 chrX 49133477 49134339 -117515957 + Lx9 LINE L1 5169 6147 -1497 2 959 587 294 28 94 chrX 49134511 49134691 -117515605 - B3A SINE B2 -21 174 7 2 959 13781 172 142 72 chrX 49134861 49135419 -117514877 + L1_Mus1 LINE L1 239 836 -5047 2 959 293 111 0 36 chrX 49135419 49135475 -117514821 + 4.5SRNA scRNA scRNA 33 86 -8 2 959 785 83 0 0 chrX 49135425 49135533 -117514763 + B1_Mus2 SINE Alu 40 147 0 2 959 13781 172 142 72 chrX 49135533 49136870 -117513426 + L1_Mus1 LINE L1 837 2273 -3610 2 959 965 112 7 7 chrX 49136870 49137014 -117513282 + B1_Mus2 SINE Alu 4 147 0 2 959 13781 148 137 18 chrX 49137014 49140711 -117509585 + L1_Mus1 LINE L1 2274 6567 0 2 959 1393 74 21 0 chrX 49140740 49140929 -117509367 + B2_Mm2 SINE B2 2 194 -1 2 959 3551 51 0 2 chrX 49142571 49143005 -117507291 + L1_Mus1 LINE L1 6124 6556 -11 2 959 3938 190 42 5 chrX 49143135 49144136 -117506160 + Lx3C LINE L1 5897 6981 -16 2 959 368 248 52 26 chrX 49144346 49144462 -117505834 - Charlie5 DNA MER1_type -834 1790 1672 2 959 1013 150 0 6 chrX 49144504 49144664 -117505632 + GA-rich Low_complexity Low_complexity 1 160 0 2 959 1633 37 0 0 chrX 49144664 49144855 -117505441 + B2_Mm1t SINE B2 2 192 -1 2 959 1013 150 0 6 chrX 49144855 49144875 -117505421 + polypurine Low_complexity Low_complexity 161 180 0 2 959 948 134 0 0 chrX 49144888 49145045 -117505251 + (GGGAGA)n Simple_repeat Simple_repeat 3 159 0 2 959 2721 144 42 24 chrX 49145639 49146138 -117504158 + RLTR28 LTR ERVL 17 524 0 2 959 356 340 32 32 chrX 49147538 49147693 -117502603 + MER63A DNA AcHobo 38 192 -18 2 959 5219 44 0 0 chrX 49147784 49148414 -117501882 + L1Md_A LINE L1 5953 6582 0 2 959 1617 20 5 5 chrX 49148413 49148613 -117501683 + L1Md_F2 LINE L1 6382 6581 -1 2 959 1260 74 48 33 chrX 49149538 49149748 -117500548 + L1_Mus3 LINE L1 6426 6638 0 2 959 592 256 17 0 chrX 49149767 49149884 -117500412 + B3 SINE B2 8 126 -90 2 959 1050 57 0 0 chrX 49150485 49150625 -117499671 + L1_Mus1 LINE L1 6428 6567 0 2 959 216 0 0 0 chrX 49150937 49150961 -117499335 + (T)n Simple_repeat Simple_repeat 1 24 0 2 959 23 0 0 0 chrX 49151004 49151027 -117499269 + AT_rich Low_complexity Low_complexity 1 23 0 2 959 669 247 102 11 chrX 49151155 49151331 -117498965 + B3A SINE B2 1 192 -6 2 960 389 270 79 21 chrX 49152053 49152193 -117498103 + B1F1 SINE Alu 2 149 0 2 960 239 241 0 18 chrX 49152435 49152490 -117497806 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 960 631 243 133 37 chrX 49153217 49153405 -117496891 - B3 SINE B2 -5 211 6 2 960 1109 61 0 26 chrX 49153713 49153865 -117496431 - B1_Mus1 SINE Alu 0 148 1 2 960 216 191 0 0 chrX 49154044 49154086 -117496210 + (GTCTG)n Simple_repeat Simple_repeat 3 44 0 2 960 1059 85 0 7 chrX 49154794 49154936 -117495360 + B1_Mus1 SINE Alu 2 142 -6 2 960 672 13 0 0 chrX 49154938 49155015 -117495281 + (GAAA)n Simple_repeat Simple_repeat 1 77 0 2 960 31 0 0 0 chrX 49155165 49155196 -117495100 + AT_rich Low_complexity Low_complexity 1 31 0 2 960 1071 88 0 7 chrX 49155262 49155400 -117494896 + B1_Mus1 SINE Alu 2 138 -10 2 960 195 42 0 0 chrX 49155400 49155424 -117494872 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 960 627 81 0 0 chrX 49155425 49155511 -117494785 + (GAAA)n Simple_repeat Simple_repeat 4 89 0 2 960 1036 51 7 7 chrX 49155680 49155818 -117494478 + B1_Mus2 SINE Alu 10 147 0 2 960 14300 47 2 1 chrX 49156125 49157402 -117492894 - L1Md_F2 LINE L1 -12 6570 5294 2 960 5545 125 7 5 chrX 49157402 49158269 -117492027 - L1_Mus4 LINE L1 -4 6632 5764 2 960 14300 60 7 0 chrX 49158269 49159584 -117490712 - L1Md_F2 LINE L1 -590 5293 3966 2 960 663 160 106 8 chrX 49160264 49160396 -117489900 + B1_Mus2 SINE Alu 1 145 -2 2 960 2315 188 41 16 chrX 49160613 49161014 -117489282 + RLTR16 LTR ERVK 1 412 -93 2 960 750 67 0 0 chrX 49161014 49161119 -117489177 + (TG)n Simple_repeat Simple_repeat 2 106 0 2 960 2315 188 41 16 chrX 49161119 49161209 -117489087 + RLTR16 LTR ERVK 413 504 -1 2 960 819 181 20 20 chrX 49161566 49161713 -117488583 - B1_Mus1 SINE Alu -1 147 1 2 960 270 238 32 0 chrX 49162179 49162242 -117488054 + (TATG)n Simple_repeat Simple_repeat 3 67 0 2 960 195 162 0 0 chrX 49162245 49162282 -117488014 + (CATA)n Simple_repeat Simple_repeat 4 40 0 2 960 684 221 128 46 chrX 49162359 49162554 -117487742 + B3 SINE B2 1 211 -5 2 960 789 311 49 24 chrX 49162571 49162818 -117487478 + B4 SINE B4 40 292 0 2 960 1869 222 57 119 chrX 49162994 49163719 -117486577 + Lx7 LINE L1 6967 7646 -50 2 960 1035 124 6 6 chrX 49163746 49163924 -117486372 + L1_Mus4 LINE L1 6458 6635 -1 2 960 22 0 0 0 chrX 49163975 49163997 -117486299 + AT_rich Low_complexity Low_complexity 1 22 0 2 960 737 293 43 29 chrX 49163997 49164412 -117485884 + L1M4 LINE L1 5356 5776 -402 2 960 301 292 0 0 chrX 49164425 49164490 -117485806 + B1_Mur1 SINE Alu 68 132 -17 2 960 1364 272 20 14 chrX 49164653 49165004 -117485292 + Lx5 LINE L1 6680 7032 -18 2 960 351 0 0 0 chrX 49165046 49165085 -117485211 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2 960 3740 58 0 4 chrX 49165286 49165757 -117484539 + L1Md_F2 LINE L1 6102 6570 -12 2 960 36 53 0 0 chrX 49165776 49165833 -117484463 + AT_rich Low_complexity Low_complexity 1 57 0 2 960 370 370 95 49 chrX 49165968 49166248 -117484048 + L1MEf LINE L1 290 583 -5617 3 960 195 42 0 0 chrX 49166248 49166272 -117484024 + (TTA)n Simple_repeat Simple_repeat 2 25 0 3 960 1222 61 0 0 chrX 49166274 49166422 -117483874 - B1_Mus1 SINE Alu 0 148 1 3 960 370 370 95 49 chrX 49166422 49166485 -117483811 + L1MEf LINE L1 584 652 -5548 3 960 229 281 16 0 chrX 49166485 49166549 -117483747 + ID2 SINE ID 2 66 -17 3 960 237 256 58 43 chrX 49166575 49166714 -117483582 + L1MEf LINE L1 644 784 -5416 3 960 481 259 145 0 chrX 49166715 49166846 -117483450 + RSINE1 SINE B4 4 153 -12 3 960 29 28 0 0 chrX 49166849 49166885 -117483411 + AT_rich Low_complexity Low_complexity 1 36 0 3 960 2275 154 58 3 chrX 49166885 49167249 -117483047 - ORR1C2 LTR MaLR 0 384 1 3 960 1970 148 32 0 chrX 49167251 49167589 -117482707 - ORR1C2-int LTR MaLR 0 1509 1161 3 960 2134 193 107 19 chrX 49168049 49168871 -117481425 - ORR1C2-int LTR MaLR -348 1161 123 3 960 1155 54 0 20 chrX 49169294 49169444 -117480852 - B1_Mm SINE Alu 0 147 1 3 960 255 300 116 53 chrX 49169451 49169546 -117480750 + B3A SINE B2 98 198 0 3 960 504 283 35 21 chrX 49169581 49169722 -117480574 + ID_B1 SINE B4 82 224 0 3 960 301 255 125 18 chrX 49169787 49169899 -117480397 + L1M2 LINE L1 3033 3156 -2987 3 960 245 238 54 10 chrX 49169907 49170035 -117480261 + L1M2 LINE L1 3266 3410 -2736 3 960 1259 256 111 24 chrX 49170022 49170527 -117479769 + L1M2 LINE L1 4230 4778 -1365 3 960 412 341 79 25 chrX 49171084 49171364 -117478932 + L2a LINE L2 2552 2846 -573 3 960 231 373 85 47 chrX 49171380 49171591 -117478705 + L2a LINE L2 2954 3172 -254 3 960 191 205 0 0 chrX 49172457 49172496 -117477800 + L2a LINE L2 3376 3414 -12 3 960 831 301 5 15 chrX 49173207 49173409 -117476887 - ID_B1 SINE B4 -23 201 2 3 960 509 271 25 0 chrX 49173451 49173573 -117476723 - MER2B DNA MER2_type 0 336 212 3 960 414 57 0 0 chrX 49173722 49173775 -117476521 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 3 960 702 257 26 19 chrX 49173780 49173935 -117476361 - RSINE1 SINE B4 -1 164 9 3 960 282 95 0 0 chrX 49173954 49173996 -117476300 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 3 960 1558 181 68 19 chrX 49174103 49174413 -117475883 + Lx5 LINE L1 6721 7045 -5 3 960 762 286 0 27 chrX 49175380 49175563 -117474733 - B3A SINE B2 -18 180 3 3 960 2543 99 11 3 chrX 49176090 49176446 -117473850 - L1_Mus3 LINE L1 -5 6633 6275 3 960 3403 93 2 0 chrX 49176446 49176895 -117473401 + L1_Mm LINE L1 5338 5787 -96 3 960 234 305 57 0 chrX 49177336 49177477 -117472819 - L1M LINE L1 -2639 5403 5255 3 960 381 272 12 4 chrX 49177479 49177640 -117472656 + L1MA5 LINE L1 5835 5997 -303 3 960 1763 209 52 22 chrX 49178061 49178423 -117471873 + ORR1D1 LTR MaLR 2 374 0 3 960 657 247 151 6 chrX 49178617 49178796 -117471500 + ID_B1 SINE B4 11 215 -9 3 960 432 0 0 0 chrX 49178818 49178866 -117471430 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 960 573 242 7 22 chrX 49178975 49179110 -117471186 - B1F1 SINE Alu -10 139 7 3 960 622 329 62 5 chrX 49179346 49179557 -117470739 - MIRb SINE MIR -31 237 15 3 960 512 287 35 32 chrX 49179850 49180028 -117470268 + RSINE1 SINE B4 22 165 0 3 960 426 39 0 0 chrX 49180331 49180383 -117469913 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 960 1407 219 188 88 chrX 49180385 49180865 -117469431 + MT2A LTR ERVL 6 533 0 3 960 274 243 56 37 chrX 49180916 49181023 -117469273 + Lx8 LINE L1 7363 7471 -2 3 960 277 250 40 161 chrX 49181122 49181168 -117469128 + PB1D10 SINE Alu 3 111 -6 3 960 428 205 13 0 chrX 49181168 49181246 -117469050 + ID_B1 SINE B4 140 218 -6 3 960 1012 243 14 5 chrX 49181337 49181544 -117468752 - B3 SINE B2 -1 215 7 3 960 883 264 6 0 chrX 49181678 49181860 -117468436 + B3 SINE B2 27 209 -7 3 960 711 262 25 6 chrX 49181930 49182091 -117468205 - B3A SINE B2 -34 164 1 3 960 260 250 0 0 chrX 49182175 49182223 -117468073 - ID4 SINE ID -34 49 2 3 960 236 308 0 0 chrX 49182178 49182230 -117468066 - ZP3AR Satellite Satellite -124 88 37 3 960 642 60 0 0 chrX 49182642 49182725 -117467571 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 3 960 1224 57 0 0 chrX 49182729 49182870 -117467426 - B1_Mus1 SINE Alu -6 142 2 3 960 785 312 23 23 chrX 49183161 49183381 -117466915 + ID_B1 SINE B4 2 221 -3 3 960 463 283 0 0 chrX 49183800 49183892 -117466404 - RSINE1 SINE B4 -35 130 39 3 960 226 262 0 62 chrX 49184294 49184359 -117465937 - B1_Mur1 SINE Alu -8 141 81 3 960 330 45 0 0 chrX 49185025 49185069 -117465227 + (GA)n Simple_repeat Simple_repeat 2 45 0 3 960 239 222 39 29 chrX 49185080 49185182 -117465114 + Lx9 LINE L1 7524 7626 -18 3 960 581 244 0 160 chrX 49185765 49185921 -117464375 + RSINE1 SINE B4 2 132 -33 3 960 346 304 43 9 chrX 49185951 49186067 -117464229 + Lx8 LINE L1 6617 6736 -737 3 960 819 173 91 40 chrX 49186080 49186255 -117464041 - URR1B DNA MER1_type -6 219 36 3 960 4040 72 0 91 chrX 49186258 49186841 -117463455 - L1_Mus2 LINE L1 0 6566 6037 3 960 7643 82 14 7 chrX 49186841 49187869 -117462427 - L1_Mus4 LINE L1 -15 6621 5587 3 960 5136 146 7 93 chrX 49187883 49188529 -117461767 + L1_Mm LINE L1 4594 5229 -654 3 960 517 95 0 13 chrX 49188529 49188604 -117461692 - RMER17A2 LTR ERVK -832 74 1 3 960 5136 146 7 93 chrX 49188604 49188902 -117461394 + L1_Mm LINE L1 5230 5524 -359 3 960 328 265 29 0 chrX 49188902 49188970 -117461326 - URR1B DNA MER1_type -155 70 1 3 960 451 372 15 44 chrX 49188970 49189240 -117461056 + Lx8 LINE L1 6761 7022 -451 3 960 708 106 0 0 chrX 49189242 49189348 -117460948 - Lx2 LINE L1 -427 6573 6468 3 960 2577 127 82 33 chrX 49189348 49189773 -117460523 + Lx2 LINE L1 6550 6995 -2 3 960 796 260 73 95 chrX 49189841 49190211 -117460085 + Lx8 LINE L1 7105 7466 -7 3 960 251 273 0 29 chrX 49190213 49190281 -117460015 + BC1_Mm scRNA scRNA 5 70 -82 3 960 572 240 48 32 chrX 49190221 49190346 -117459950 + RSINE1 SINE B4 14 140 -25 3 960 294 29 0 0 chrX 49190347 49190382 -117459914 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 960 768 63 0 0 chrX 49190382 49190492 -117459804 + (GA)n Simple_repeat Simple_repeat 2 112 0 3 960 1826 204 105 11 chrX 49190993 49191364 -117458932 - MTD LTR MaLR -8 411 6 3 960 719 219 95 106 chrX 49191403 49191592 -117458704 - ID_B1 SINE B4 -33 191 5 3 960 373 298 198 6 chrX 49192363 49192535 -117457761 + ID_B1 SINE B4 7 211 -13 3 960 273 98 0 0 chrX 49192612 49192653 -117457643 + (TAA)n Simple_repeat Simple_repeat 2 42 0 3 960 300 175 0 0 chrX 49193368 49193431 -117456865 + CT-rich Low_complexity Low_complexity 1 63 0 3 960 8438 44 3 4 chrX 49194005 49195648 -117454648 - L1Md_F3 LINE L1 -3 6581 4936 3 960 2851 84 40 20 chrX 49195648 49196049 -117454247 - RLTR10A LTR ERVK 0 411 3 3 960 8373 53 2 8 chrX 49196049 49196142 -117454154 - L1Md_F3 LINE L1 -948 4935 4849 3 960 487 301 6 19 chrX 49196214 49196373 -117453923 + MER96B DNA hAT 1 157 -260 3 960 22 35 0 0 chrX 49196678 49196707 -117453589 + AT_rich Low_complexity Low_complexity 1 29 0 3 960 23 33 0 0 chrX 49196820 49196850 -117453446 + AT_rich Low_complexity Low_complexity 1 30 0 3 960 676 281 169 24 chrX 49197049 49197297 -117452999 - B4 SINE B4 0 292 9 3 960 337 315 26 53 chrX 49197338 49197364 -117452932 - PB1D10 SINE Alu -4 113 3 3 960 338 286 0 45 chrX 49197364 49197452 -117452844 - ID_B1 SINE B4 -57 167 84 3 960 474 276 8 17 chrX 49197523 49197641 -117452655 - PB1D7 SINE Alu 0 120 4 3 960 1175 226 173 10 chrX 49198346 49198646 -117451650 + RMER1B Other Other 45 393 -673 3 960 341 274 95 65 chrX 49198770 49198938 -117451358 - RMER13A LTR ERVK -666 194 22 3 960 1672 249 84 33 chrX 49198961 49199560 -117450736 + RMER1A Other Other 1 504 -526 3 960 2590 247 97 97 chrX 49199560 49200420 -117449876 + RMER13A LTR ERVK 1 860 0 3 960 1672 240 69 19 chrX 49200420 49200500 -117449796 + RMER1A Other Other 378 455 -575 3 960 3316 224 147 25 chrX 49200581 49201638 -117448658 + RMER1A Other Other 1 1023 -7 3 960 24 0 0 0 chrX 49201650 49201674 -117448622 + AT_rich Low_complexity Low_complexity 1 24 0 3 960 657 202 0 0 chrX 49201952 49202061 -117448235 + ID_B1 SINE B4 115 223 -1 3 960 514 274 44 25 chrX 49202246 49202568 -117447728 - L1MA4 LINE L1 -362 5938 5537 3 960 752 293 38 9 chrX 49202569 49202886 -117447410 - L1M4 LINE L1 -1463 5181 4856 3 960 26 0 0 0 chrX 49202886 49202912 -117447384 + AT_rich Low_complexity Low_complexity 1 26 0 3 960 623 292 26 31 chrX 49202976 49202990 -117447306 - B3A SINE B2 -5 193 181 3 960 396 0 0 0 chrX 49202990 49203034 -117447262 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 960 623 292 26 31 chrX 49203034 49203213 -117447083 - B3A SINE B2 -18 180 1 3 960 261 83 0 0 chrX 49203215 49203251 -117447045 + (CTAA)n Simple_repeat Simple_repeat 3 38 0 3 960 785 297 138 41 chrX 49203299 49203877 -117446419 - L1M4 LINE L1 -5412 1130 497 3 960 460 68 14 14 chrX 49203927 49204001 -117446295 + (CA)n Simple_repeat Simple_repeat 1 74 0 3 960 261 0 0 0 chrX 49204420 49204449 -117445847 + (T)n Simple_repeat Simple_repeat 1 29 0 3 960 1267 61 0 0 chrX 49204449 49204596 -117445700 - B1_Mus1 SINE Alu 0 148 2 3 960 347 333 10 0 chrX 49204681 49204783 -117445513 + L1M4 LINE L1 274 376 -6166 3 960 667 218 30 15 chrX 49204808 49204943 -117445353 + B4 SINE B4 125 261 -31 3 960 23 33 0 0 chrX 49205591 49205621 -117444675 + AT_rich Low_complexity Low_complexity 1 30 0 3 960 2616 75 9 9 chrX 49205735 49206084 -117444212 - L1_Mus3 LINE L1 -7 6631 6283 3 960 42 20 0 0 chrX 49206183 49206232 -117444064 + AT_rich Low_complexity Low_complexity 1 49 0 3 960 23 97 0 0 chrX 49206372 49206444 -117443852 + AT_rich Low_complexity Low_complexity 1 72 0 3 960 27 0 0 0 chrX 49206524 49206551 -117443745 + AT_rich Low_complexity Low_complexity 1 27 0 3 960 558 246 8 8 chrX 49206648 49206779 -117443517 - ID_B1 SINE B4 0 224 94 3 960 353 369 15 8 chrX 49207615 49207749 -117442547 + MER5A DNA MER1_type 2 136 -53 3 960 1191 175 45 5 chrX 49207972 49208173 -117442123 + B3 SINE B2 1 209 -7 3 960 232 353 15 0 chrX 49208182 49208250 -117442046 - PB1D9 SINE Alu -32 88 20 3 960 1385 84 11 0 chrX 49208320 49208498 -117441798 + B2_Mm1t SINE B2 5 184 -9 4 960 9932 83 15 9 chrX 49208510 49210472 -117439824 + Lx3_Mus LINE L1 5008 6986 -23 4 960 234 0 0 0 chrX 49210472 49210498 -117439798 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 4 960 9932 90 18 11 chrX 49210498 49210510 -117439786 + Lx3_Mus LINE L1 6987 6993 -16 4 960 235 292 46 0 chrX 49210510 49210522 -117439774 - PB1D10 SINE Alu -13 104 37 4 960 238 245 0 0 chrX 49210522 49210575 -117439721 - ID_B1 SINE B4 -54 170 118 4 960 298 254 28 0 chrX 49210597 49210668 -117439628 - MER5A1 DNA MER1_type -93 73 1 4 960 668 61 20 10 chrX 49210935 49211035 -117439261 - L1_Mus2 LINE L1 0 6566 6466 4 960 252 128 170 0 chrX 49211227 49211274 -117439022 - L1M4 LINE L1 -1124 5022 4968 4 960 580 305 98 66 chrX 49211274 49211622 -117438674 - ORR1E LTR MaLR 0 359 1 4 960 568 291 59 21 chrX 49211625 49211864 -117438432 - L1M4c LINE L1 -1175 5831 5584 4 960 434 300 30 0 chrX 49211871 49211971 -117438325 + RSINE1 SINE B4 1 103 -62 4 960 426 20 0 0 chrX 49212000 49212051 -117438245 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 960 245 257 0 41 chrX 49212083 49212156 -117438140 - L1M4c LINE L1 -1426 5580 5511 4 960 1896 176 130 21 chrX 49212240 49212618 -117437678 - MTD LTR MaLR 0 419 1 4 960 293 289 0 109 chrX 49212725 49212853 -117437443 + PB1D7 SINE Alu 2 118 -2 4 960 613 290 48 28 chrX 49212875 49213127 -117437169 - L1MA6 LINE L1 -108 6192 5936 4 960 785 209 7 0 chrX 49213145 49213298 -117436998 - ID_B1 SINE B4 -24 200 47 4 960 605 206 109 0 chrX 49213320 49213485 -117436811 - L1MA6 LINE L1 -332 5968 5786 4 960 438 270 17 25 chrX 49213485 49213607 -117436689 - PB1D10 SINE Alu -27 122 1 4 960 330 301 62 74 chrX 49213928 49214186 -117436110 - L1M4c LINE L1 -4160 2848 2594 4 960 1224 253 78 9 chrX 49214210 49214541 -117435755 - MTE2a-int LTR MaLR -1225 355 2 4 960 1182 271 97 6 chrX 49214545 49214886 -117435410 - MTE2a LTR MaLR -7 372 1 4 960 5442 62 68 1 chrX 49215007 49215684 -117434612 + Lx3_Mus LINE L1 6288 7009 0 4 960 5018 181 28 28 chrX 49215697 49216580 -117433716 - Lx5 LINE L1 -3 7047 6165 4 960 336 258 12 2 chrX 49216580 49216680 -117433616 - L1M4c LINE L1 -4912 2422 2288 4 960 327 316 16 0 chrX 49216754 49216850 -117433446 - B1F1 SINE Alu -20 100 1 4 960 891 221 107 107 chrX 49217023 49217388 -117432908 + RMER17B LTR ERVK 2 366 -592 4 960 4870 196 59 24 chrX 49217373 49218354 -117431942 - ORR1B2-int LTR MaLR -338 1171 167 4 960 672 48 0 0 chrX 49218354 49218438 -117431858 + (CCA)n Simple_repeat Simple_repeat 3 86 0 4 960 4870 196 59 24 chrX 49218438 49218587 -117431709 - ORR1B2-int LTR MaLR -1343 166 3 4 960 1961 194 0 3 chrX 49218587 49218924 -117431372 - ORR1B2 LTR MaLR 0 367 32 4 960 406 253 221 0 chrX 49219535 49219630 -117430666 + ID_B1 SINE B4 86 201 -23 4 960 338 147 30 23 chrX 49219641 49219773 -117430523 + (TA)n Simple_repeat Simple_repeat 1 133 0 4 960 691 209 7 80 chrX 49219773 49219924 -117430372 + B1_Mur1 SINE Alu 3 142 -7 4 960 309 159 0 0 chrX 49219936 49219999 -117430297 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 960 268 274 20 51 chrX 49220535 49220638 -117429658 + B1_Mm SINE Alu 41 142 -7 4 960 258 250 0 18 chrX 49220642 49220699 -117429597 + Lx8 LINE L1 7147 7202 -271 4 960 2825 189 49 55 chrX 49220876 49221508 -117428788 - RMER1C Other Other 0 1342 386 4 960 253 330 52 26 chrX 49221737 49221852 -117428444 + L2a LINE L2 2846 2963 -456 4 960 379 327 143 33 chrX 49221916 49222188 -117428108 + L2a LINE L2 3120 3421 -5 4 960 23 0 0 0 chrX 49222502 49222525 -117427771 + AT_rich Low_complexity Low_complexity 1 23 0 4 960 431 229 21 0 chrX 49222543 49222639 -117427657 + PB1D10 SINE Alu 19 116 -1 4 960 303 93 0 0 chrX 49222656 49222699 -117427597 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 4 960 408 300 55 0 chrX 49222718 49222828 -117427468 + B1F SINE Alu 5 120 -29 4 960 514 244 71 33 chrX 49222862 49223044 -117427252 + Lx8 LINE L1 7284 7472 -1 4 960 373 294 0 0 chrX 49223469 49223554 -117426742 - RSINE1 SINE B4 -25 140 56 4 960 2052 225 96 31 chrX 49223636 49224159 -117426137 - RMER1C Other Other 0 1342 786 4 960 771 249 31 11 chrX 49224580 49224771 -117425525 - RMER1C Other Other -1046 296 102 4 960 616 288 0 47 chrX 49225926 49226097 -117424199 + RSINE1 SINE B4 3 165 0 4 960 189 107 0 0 chrX 49226102 49226130 -117424166 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 960 3987 61 4 10 chrX 49226257 49226772 -117423524 + L1_Mus3 LINE L1 6127 6638 0 4 960 216 0 0 0 chrX 49227372 49227396 -117422900 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 4 960 1305 130 5 9 chrX 49229204 49229422 -117420874 - RLTR11A2 LTR ERVK -310 217 1 4 960 229 315 21 73 chrX 49229422 49229518 -117420778 - B4A SINE B4 -159 133 43 4 960 2116 73 52 3 chrX 49229918 49230206 -117420090 + Lx2 LINE L1 6690 6991 -6 4 960 497 302 29 0 chrX 49230228 49230367 -117419929 + ID_B1 SINE B4 82 224 0 4 960 293 246 14 0 chrX 49230491 49230560 -117419736 + ID_B1 SINE B4 154 223 -1 4 960 556 189 23 0 chrX 49231389 49231521 -117418775 + MER96B DNA hAT 192 326 -91 4 960 323 305 56 19 chrX 49231726 49231744 -117418552 - B1F SINE Alu -12 137 27 4 960 394 247 34 0 chrX 49231744 49231833 -117418463 - ID_B1 SINE B4 -25 199 108 4 960 735 187 0 35 chrX 49231913 49232057 -117418239 + B1_Mus1 SINE Alu 1 139 -9 4 960 257 200 53 13 chrX 49232213 49232289 -117418007 + Lx8 LINE L1 7394 7472 -1 4 960 296 295 53 0 chrX 49232858 49232953 -117417343 - MER58B DNA MER1_type -1 340 241 4 960 2395 75 25 0 chrX 49232954 49233273 -117417023 - ORR1A2 LTR MaLR 0 327 1 4 960 415 308 41 27 chrX 49233372 49233519 -117416777 + ID_B1 SINE B4 76 224 0 4 960 290 351 0 13 chrX 49233528 49233603 -117416693 + ID4_ SINE ID 3 76 -7 4 960 229 325 21 95 chrX 49233613 49233708 -117416588 - MER58B DNA MER1_type -251 90 3 4 960 455 216 216 0 chrX 49234242 49234381 -117415915 + RLTR28 LTR ERVL 9 177 -347 4 960 261 164 0 0 chrX 49234385 49234458 -117415838 + GA-rich Low_complexity Low_complexity 2 74 0 4 960 1168 170 27 280 chrX 49234716 49234913 -117415383 - ORR1C2 LTR MaLR 0 384 185 4 960 219 36 0 0 chrX 49234913 49234941 -117415355 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 960 1168 170 27 280 chrX 49234941 49235257 -117415039 - ORR1C2 LTR MaLR -200 184 1 4 960 632 292 71 78 chrX 49235405 49235713 -117414583 + ORR1E LTR MaLR 54 359 0 4 960 233 264 67 40 chrX 49236252 49236327 -117413969 + MIR SINE MIR 31 107 -155 4 960 227 269 160 11 chrX 49236354 49236448 -117413848 - RMER15 LTR ERVL -43 532 425 4 960 239 321 54 18 chrX 49236657 49236768 -117413528 - Lx8 LINE L1 -322 7151 7037 4 960 193 208 75 100 chrX 49236768 49236848 -117413448 + MIR SINE MIR 112 189 -73 4 960 768 232 56 6 chrX 49237644 49237822 -117412474 + B3A SINE B2 1 187 -11 4 960 501 58 0 0 chrX 49239867 49239936 -117410360 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 960 254 271 28 14 chrX 49239954 49240025 -117410271 - B4 SINE B4 0 292 221 4 960 413 237 5 1 chrX 49240044 49240135 -117410161 - B4 SINE B4 -126 98 5 4 960 297 0 0 0 chrX 49240713 49240746 -117409550 + (AGGGGG)n Simple_repeat Simple_repeat 2 34 0 4 960 26 50 0 0 chrX 49242027 49242067 -117408229 + AT_rich Low_complexity Low_complexity 1 40 0 4 960 428 269 8 25 chrX 49242293 49242411 -117407885 + PB1D10 SINE Alu 2 117 0 4 960 212 294 0 0 chrX 49242425 49242476 -117407820 + GA-rich Low_complexity Low_complexity 3 53 0 4 960 406 293 58 29 chrX 49242477 49242614 -117407682 + ID_B1 SINE B4 80 220 -4 4 960 1087 205 9 23 chrX 49242820 49243035 -117407261 + B3 SINE B2 2 213 -3 4 960 22 35 0 0 chrX 49243036 49243065 -117407231 + AT_rich Low_complexity Low_complexity 1 29 0 4 960 207 0 0 0 chrX 49243893 49243916 -117406380 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 4 960 257 333 0 0 chrX 49244073 49244151 -117406145 + ID4_ SINE ID 2 79 -4 4 960 596 294 36 10 chrX 49244300 49244496 -117405800 - ID_B1 SINE B4 -15 209 9 4 960 441 325 71 30 chrX 49244964 49245259 -117405037 - LTR33 LTR ERVL 0 515 209 4 960 420 20 0 0 chrX 49245720 49245769 -117404527 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 960 393 305 92 15 chrX 49246049 49246179 -117404117 + RSINE1 SINE B4 1 140 -25 4 960 414 0 0 0 chrX 49246225 49246271 -117404025 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 960 239 261 118 54 chrX 49246302 49246395 -117403901 + PB1D10 SINE Alu 1 99 -18 4 960 198 0 0 0 chrX 49246408 49246430 -117403866 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 4 960 283 366 69 55 chrX 49246513 49246730 -117403566 + B4 SINE B4 55 274 -18 4 960 395 332 88 27 chrX 49247284 49247717 -117402579 + L1M5 LINE L1 4053 4518 -1628 4 960 285 247 0 0 chrX 49247897 49247978 -117402318 + (TATG)n Simple_repeat Simple_repeat 4 84 0 4 960 465 248 23 136 chrX 49247985 49248162 -117402134 - RSINE1 SINE B4 0 165 9 4 960 821 63 0 0 chrX 49248757 49248868 -117401428 + B1_Mus1 SINE Alu 1 111 -37 4 960 823 205 135 0 chrX 49248919 49249104 -117401192 - B3 SINE B2 -5 211 2 4 960 655 280 46 0 chrX 49249132 49249307 -117400989 - B3 SINE B2 0 216 34 4 960 207 0 0 0 chrX 49249309 49249332 -117400964 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 4 960 753 116 151 8 chrX 49249369 49249529 -117400767 - L1_Mus4 LINE L1 0 6636 6423 4 960 527 33 0 0 chrX 49249519 49249580 -117400716 + L1_Mus4 LINE L1 6396 6456 -180 4 960 268 276 0 33 chrX 49249630 49249720 -117400576 - PB1D10 SINE Alu -20 97 11 4 960 243 270 75 43 chrX 49249645 49249738 -117400558 - B4A SINE B4 -116 176 81 4 960 421 267 73 11 chrX 49249849 49250027 -117400269 - L1M4 LINE L1 -794 5352 5164 4 960 187 257 26 39 chrX 49250300 49250377 -117399919 - L2b LINE L2 -40 3347 3272 4 960 180 0 0 0 chrX 49250819 49250839 -117399457 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 960 211 209 0 0 chrX 49250941 49250984 -117399312 + (CAGAGA)n Simple_repeat Simple_repeat 4 46 0 4 960 285 29 0 0 chrX 49251016 49251050 -117399246 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 960 205 297 108 0 chrX 49251085 49251159 -117399137 - L2b LINE L2 -236 3139 3058 4 960 185 132 0 26 chrX 49251330 49251369 -117398927 + CT-rich Low_complexity Low_complexity 4 41 0 5 960 375 324 14 7 chrX 49251422 49251562 -117398734 - ID_B1 SINE B4 -21 203 63 5 960 780 172 171 5 chrX 49251560 49251747 -117398549 - URR1B DNA MER1_type -7 218 1 5 960 487 264 27 20 chrX 49251772 49251919 -117398377 + B1F1 SINE Alu 1 148 -1 5 960 790 250 133 21 chrX 49252430 49252716 -117397580 + MTEb LTR MaLR 3 320 -59 5 960 1388 95 0 54 chrX 49252716 49252939 -117397357 - Lx2A1 LINE L1 -198 6810 6600 5 960 931 202 54 8 chrX 49253250 49253489 -117396807 - Lx7 LINE L1 -70 7626 7377 5 960 2144 211 41 92 chrX 49253484 49253703 -117396593 - Lx7 LINE L1 -491 7205 6997 5 960 2063 63 0 0 chrX 49253703 49253956 -117396340 - L1_Mus1 LINE L1 0 6567 6315 5 960 2144 211 41 92 chrX 49253956 49254326 -117395970 - Lx7 LINE L1 -700 6996 6646 5 960 225 0 0 0 chrX 49254334 49254359 -117395937 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 5 960 4661 172 5 40 chrX 49254359 49255233 -117395063 - L1_Mur3 LINE L1 -159 5721 4878 5 960 458 221 29 16 chrX 49255233 49255337 -117394959 - B1_Mur2 SINE Alu -5 115 17 5 960 251 244 43 109 chrX 49255268 49255360 -117394936 - MT2B LTR ERVL -361 240 155 5 960 1195 286 30 27 chrX 49255388 49255755 -117394541 + MTE2b LTR MaLR 8 375 -4 5 960 535 248 60 8 chrX 49255822 49255956 -117394340 + RSINE1 SINE B4 4 144 -21 5 960 183 250 29 29 chrX 49256659 49256729 -117393567 - MIRb SINE MIR -141 127 58 5 960 606 248 43 0 chrX 49256774 49256915 -117393381 - B1F2 SINE Alu -1 148 2 5 960 207 356 29 9 chrX 49257546 49257651 -117392645 - MIRm SINE MIR -4 272 166 5 960 308 361 14 14 chrX 49257761 49257937 -117392359 - MIR SINE MIR -56 212 33 5 960 295 342 26 0 chrX 49258150 49258264 -117392032 + PB1D10 SINE Alu 1 117 0 5 960 257 272 121 110 chrX 49258273 49258455 -117391841 + B3A SINE B2 1 184 -14 5 960 237 65 0 0 chrX 49259823 49259854 -117390442 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 5 960 386 268 89 8 chrX 49259854 49259978 -117390318 - B1_Mur1 SINE Alu -14 135 2 5 960 517 323 0 54 chrX 49260030 49260070 -117390226 - RSINE1 SINE B4 -4 161 127 5 960 387 0 0 0 chrX 49260070 49260113 -117390183 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 960 517 323 0 54 chrX 49260113 49260239 -117390057 - RSINE1 SINE B4 -39 126 4 5 960 300 329 77 45 chrX 49260353 49260640 -117389656 - L1ME4a LINE L1 -230 5894 5599 5 960 288 281 51 26 chrX 49260646 49260663 -117389633 + PB1D9 SINE Alu 1 45 -75 5 960 377 227 0 0 chrX 49260663 49260738 -117389558 + ID_B1 SINE B4 96 170 -54 5 960 288 281 51 26 chrX 49260738 49260763 -117389533 + PB1D9 SINE Alu 46 120 0 5 960 224 358 14 36 chrX 49260939 49261078 -117389218 + MIRb SINE MIR 132 267 -1 5 960 206 274 172 40 chrX 49261101 49261200 -117389096 + L2b LINE L2 3238 3349 -26 5 960 267 54 0 0 chrX 49261225 49261262 -117389034 + (TATG)n Simple_repeat Simple_repeat 4 40 0 5 960 482 248 128 44 chrX 49261349 49261552 -117388744 + ORR1E LTR MaLR 132 351 -8 5 960 281 255 98 0 chrX 49264453 49264555 -117385741 + B1F SINE Alu 32 143 -6 5 960 406 200 22 0 chrX 49264468 49264558 -117385738 + ID_B1 SINE B4 130 221 -3 5 960 548 188 103 0 chrX 49265198 49265315 -117384981 + RSINE1 SINE B4 7 135 -30 5 960 1487 250 135 24 chrX 49265540 49266088 -117384208 - L1MB4 LINE L1 -141 6039 5431 5 960 705 267 67 0 chrX 49266965 49267160 -117383136 + ID_B1 SINE B4 2 209 -15 5 960 3761 64 21 4 chrX 49267468 49267941 -117382355 + L1Md_F2 LINE L1 6092 6572 -10 5 960 421 317 34 37 chrX 49268073 49268311 -117381985 - MLT1B LTR MaLR -16 374 110 5 960 1017 197 9 27 chrX 49268424 49268643 -117381653 + B3 SINE B2 1 215 -1 5 960 354 331 40 0 chrX 49268777 49268901 -117381395 - ID_B1 SINE B4 -25 199 71 5 960 591 242 15 15 chrX 49268912 49269046 -117381250 - B1F SINE Alu -15 134 1 5 960 480 298 33 31 chrX 49269074 49269315 -117380981 - MER31B LTR ERV1 -139 327 42 5 960 14851 22 0 0 chrX 49269315 49271014 -117379282 + L1Md_T LINE L1 3888 5586 -297 5 960 9159 6 0 0 chrX 49271014 49272040 -117378256 + L1Md_T LINE L1 5587 6582 0 5 960 450 0 0 0 chrX 49272155 49272205 -117378091 + (CAAAA)n Simple_repeat Simple_repeat 3 52 0 5 960 885 330 12 9 chrX 49272235 49272568 -117377728 - MLT-int LTR MaLR -71 1664 1331 5 960 239 240 0 0 chrX 49273111 49273225 -117377071 + CT-rich Low_complexity Low_complexity 1 114 0 5 960 470 281 26 0 chrX 49273242 49273356 -117376940 - B1F2 SINE Alu -29 120 4 5 960 504 206 86 99 chrX 49273442 49273593 -117376703 + B1_Mur3 SINE Alu 1 149 0 5 960 625 93 19 0 chrX 49273610 49273717 -117376579 + (GGAA)n Simple_repeat Simple_repeat 4 112 0 5 960 540 262 21 0 chrX 49273731 49273872 -117376424 - MLT1A-int LTR MaLR -921 450 307 5 960 389 306 6 70 chrX 49274020 49274192 -117376104 - MLT1A LTR MaLR -19 355 195 5 960 247 186 53 53 chrX 49274194 49274325 -117375971 + (CATATA)n Simple_repeat Simple_repeat 4 134 0 5 960 416 238 39 34 chrX 49274300 49274478 -117375818 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 960 342 115 0 0 chrX 49274520 49274572 -117375724 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 960 243 0 0 0 chrX 49274572 49274599 -117375697 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 960 389 288 70 53 chrX 49274815 49275042 -117375254 - L1ME3B LINE L1 -184 6056 5826 5 960 305 272 12 0 chrX 49276182 49276263 -117374033 - RMER1C Other Other -1 1341 1260 5 960 849 270 92 43 chrX 49276199 49276442 -117373854 - Lx8 LINE L1 -1 7472 7216 5 960 416 112 22 0 chrX 49276442 49276531 -117373765 + (TCTG)n Simple_repeat Simple_repeat 2 92 0 5 960 849 270 92 43 chrX 49276531 49276612 -117373684 - Lx8 LINE L1 -258 7215 7133 5 960 2182 309 118 13 chrX 49276657 49277349 -117372947 + Lx8 LINE L1 6227 6942 -531 5 960 207 0 0 0 chrX 49277349 49277372 -117372924 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 960 2182 309 118 13 chrX 49277372 49277625 -117372671 + Lx8 LINE L1 6943 7271 -202 5 960 15254 67 23 6 chrX 49277655 49280386 -117369910 + L1Md_F LINE L1 348 3094 -2789 5 960 2696 41 2 224 chrX 49280386 49280887 -117369409 + RLTR10 LTR ERVK 1 390 0 5 960 16694 30 15 30 chrX 49280888 49282919 -117367377 + RLTR10-int LTR ERVK 9 1984 -3 5 14 2741 33 2 224 chrX 49282921 49283422 -117366874 + RLTR10 LTR ERVK 1 390 0 5 961 20438 16 26 33 chrX 49283422 49284696 -117365600 + L1_Mm LINE L1 3089 4357 -1526 5 961 1290 20 0 0 chrX 49284696 49284849 -117365447 - L1Md_A LINE L1 0 6582 6430 5 961 20438 16 26 33 chrX 49284849 49285370 -117364926 + L1_Mm LINE L1 4358 4901 -982 5 961 226 183 46 77 chrX 49285370 49285435 -117364861 - RMER20A LTR ERVK -268 248 186 5 961 20438 16 26 33 chrX 49285435 49286089 -117364207 + L1_Mm LINE L1 4902 5586 -297 5 961 8279 48 0 4 chrX 49286089 49287089 -117363207 + L1Md_T LINE L1 5587 6582 0 5 961 676 314 10 55 chrX 49287222 49287421 -117362875 - B3A SINE B2 -5 193 4 5 961 255 308 0 0 chrX 49287578 49287656 -117362640 - RMER15 LTR ERVL -110 465 388 5 961 1920 125 9 65 chrX 49287698 49288039 -117362257 - RLTRETN_Mm LTR ERVK 0 322 1 5 961 1270 272 33 19 chrX 49288039 49288227 -117362069 - Lx8 LINE L1 -257 7216 7026 5 961 3546 30 0 0 chrX 49288227 49288623 -117361673 + MTA_Mm LTR MaLR 1 396 0 5 961 1270 272 33 19 chrX 49288623 49288801 -117361495 - Lx8 LINE L1 -448 7025 6846 5 961 1071 274 70 49 chrX 49288879 49289284 -117361012 - Zaphod DNA Tip100 -19 4012 3606 5 961 400 305 97 19 chrX 49289284 49289491 -117360805 - MER58A DNA MER1_type 0 224 2 5 961 1071 274 70 49 chrX 49289491 49289557 -117360739 - Zaphod DNA Tip100 -426 3605 3531 5 961 353 340 1 20 chrX 49289552 49289674 -117360622 - PB1D10 SINE Alu -19 128 15 5 961 218 398 0 0 chrX 49289594 49289692 -117360604 - ID_B1 SINE B4 -49 175 78 5 961 381 224 40 10 chrX 49289706 49289805 -117360491 - Zaphod DNA Tip100 -210 3821 3720 5 961 620 221 102 0 chrX 49289945 49290072 -117360224 + B1_Mur1 SINE Alu 1 140 -9 5 961 387 0 0 0 chrX 49290072 49290115 -117360181 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 961 465 66 0 0 chrX 49290116 49290177 -117360119 + (GGA)n Simple_repeat Simple_repeat 2 62 0 5 961 588 29 0 0 chrX 49290177 49290247 -117360049 + (GGAA)n Simple_repeat Simple_repeat 4 73 0 5 961 276 269 51 13 chrX 49290393 49290472 -117359824 + MER63B DNA AcHobo 355 436 0 5 961 651 283 0 0 chrX 49290656 49290801 -117359495 - RSINE1 SINE B4 -18 147 3 5 961 827 278 23 0 chrX 49291102 49291318 -117358978 + ID_B1 SINE B4 2 222 -2 5 961 583 210 47 24 chrX 49291466 49291593 -117358703 + ORR1E LTR MaLR 7 136 -223 5 961 448 189 52 10 chrX 49291597 49291693 -117358603 + ORR1E LTR MaLR 270 369 -1 5 961 187 334 94 21 chrX 49292156 49292253 -117358043 + MIR SINE MIR 44 145 -123 5 961 456 329 38 38 chrX 49292676 49292913 -117357383 + L3 LINE CR1 4142 4378 -111 5 961 3233 26 45 0 chrX 49293683 49294062 -117356234 + MTA_Mm LTR MaLR 1 396 0 5 961 661 205 49 0 chrX 49294787 49294909 -117355387 + B1_Mur1 SINE Alu 5 132 -17 5 961 7890 60 7 7 chrX 49294918 49295071 -117355225 - L1_Mus1 LINE L1 0 6567 6421 5 961 2511 84 84 3 chrX 49295071 49295451 -117354845 - IAPLTR2a LTR ERVK 0 411 1 5 961 7890 75 5 5 chrX 49295451 49296692 -117353604 - L1_Mus1 LINE L1 -147 6420 5173 5 961 491 296 87 22 chrX 49296730 49296868 -117353428 + B1F SINE Alu 3 149 0 5 961 468 179 0 22 chrX 49297387 49297500 -117352796 + B1F1 SINE Alu 8 144 -5 5 961 374 314 17 17 chrX 49297591 49297711 -117352585 - PB1D7 SINE Alu 0 120 1 5 961 253 337 52 10 chrX 49297730 49297826 -117352470 + Zaphod DNA Tip100 3932 4031 0 5 961 424 268 8 16 chrX 49298447 49298576 -117351720 - U1 snRNA snRNA -24 141 14 5 961 502 250 50 87 chrX 49298935 49299233 -117351063 - RMER17D2 LTR ERVK -361 448 162 5 961 269 351 68 43 chrX 49299726 49299961 -117350335 + Lx8 LINE L1 7169 7409 -64 5 961 195 42 0 0 chrX 49300622 49300646 -117349650 + (T)n Simple_repeat Simple_repeat 1 24 0 5 961 513 266 6 60 chrX 49300827 49300995 -117349301 - L1MA9 LINE L1 -396 5916 5758 5 961 618 14 0 0 chrX 49301204 49301275 -117349021 + (CA)n Simple_repeat Simple_repeat 2 72 0 5 961 2132 162 75 10 chrX 49301803 49302189 -117348107 + MTC LTR MaLR 3 413 -8 6 961 553 294 84 32 chrX 49302519 49302709 -117347587 + ID_B1 SINE B4 3 202 -22 6 961 762 230 56 51 chrX 49302707 49302941 -117347355 - MT2A LTR ERVL -10 523 289 6 961 428 198 52 0 chrX 49303463 49303579 -117346717 - Lx9 LINE L1 -1 7643 7522 6 961 5723 158 64 7 chrX 49303600 49304586 -117345710 - Lx9 LINE L1 -222 7422 6381 6 961 326 245 18 35 chrX 49304586 49304700 -117345596 - L1M2 LINE L1 -2366 3777 3666 6 961 741 329 11 63 chrX 49304702 49304971 -117345325 - B4A SINE B4 -36 256 2 6 961 224 324 15 0 chrX 49304996 49305064 -117345232 - MIRc SINE MIR -124 144 76 6 961 231 282 25 13 chrX 49306095 49306174 -117344122 - MIRb SINE MIR -166 102 23 6 961 453 191 0 0 chrX 49310626 49310731 -117339565 + CT-rich Low_complexity Low_complexity 1 105 0 6 961 396 0 0 0 chrX 49311983 49312027 -117338269 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 961 393 22 0 0 chrX 49312921 49312967 -117337329 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 961 447 19 0 0 chrX 49312967 49313018 -117337278 + (GA)n Simple_repeat Simple_repeat 2 53 0 6 961 1015 138 111 0 chrX 49313048 49313229 -117337067 - Lx3C LINE L1 0 6976 6776 6 961 902 71 27 47 chrX 49313229 49313377 -117336919 + Lx3C LINE L1 6138 6282 -694 6 961 915 269 100 65 chrX 49313635 49314005 -117336291 + Lx8 LINE L1 6790 7172 -301 6 961 988 176 46 5 chrX 49314006 49314200 -117336096 - MTC LTR MaLR 0 421 220 6 961 1957 151 130 11 chrX 49314232 49314608 -117335688 - MTC LTR MaLR 0 421 1 6 961 2302 221 53 70 chrX 49314610 49315446 -117334850 - MTC-int LTR MaLR -212 886 50 6 961 2158 184 17 10 chrX 49315463 49315881 -117334415 - MTC LTR MaLR 0 421 1 6 961 342 0 0 0 chrX 49316076 49316114 -117334182 + (TGG)n Simple_repeat Simple_repeat 2 39 0 6 961 294 163 0 0 chrX 49316155 49316204 -117334092 + Lx8 LINE L1 7416 7464 -9 6 961 5893 103 45 25 chrX 49316896 49317825 -117332471 - Lx2B LINE L1 -1 6999 6052 6 961 2165 123 7 0 chrX 49318943 49319251 -117331045 + L1_Mur2 LINE L1 5459 5768 -109 6 961 2578 115 27 17 chrX 49319251 49319659 -117330637 + Lx LINE L1 6230 6641 -13 6 961 841 107 14 0 chrX 49319662 49319802 -117330494 + (GA)n Simple_repeat Simple_repeat 2 143 0 6 961 235 250 54 87 chrX 49319807 49319899 -117330397 - RMER17C LTR ERVK -314 96 8 6 961 2515 189 82 63 chrX 49319915 49320583 -117329713 - RMER17C-int LTR ERVK 0 3238 2600 6 961 341 146 0 0 chrX 49320654 49320702 -117329594 + LSU-rRNA_Hsa rRNA rRNA 4200 4247 -788 6 961 568 249 53 82 chrX 49320805 49321011 -117329285 + B3 SINE B2 2 201 -15 6 961 24 0 0 0 chrX 49321828 49321852 -117328444 + AT_rich Low_complexity Low_complexity 1 24 0 6 961 230 222 92 100 chrX 49322806 49322926 -117327370 + MTD LTR MaLR 170 288 -131 6 961 22 0 0 0 chrX 49324830 49324852 -117325444 + AT_rich Low_complexity Low_complexity 1 22 0 6 961 1014 116 144 0 chrX 49324858 49325039 -117325257 - Lx2 LINE L1 0 6997 6791 6 961 4750 142 70 19 chrX 49329968 49330748 -117319548 - Lx4A LINE L1 0 7058 6239 6 961 1345 41 70 0 chrX 49330757 49330929 -117319367 - B2_Mm2 SINE B2 -10 185 2 6 961 231 61 0 0 chrX 49330944 49330977 -117319319 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 6 961 717 123 19 0 chrX 49330977 49331083 -117319213 - PB1D9 SINE Alu -12 108 1 6 961 610 292 0 28 chrX 49331084 49331225 -117319071 - ID_B1 SINE B4 -68 156 20 6 961 418 268 103 27 chrX 49331486 49331632 -117318664 - MER5B DNA MER1_type -21 157 1 6 961 456 19 0 0 chrX 49331682 49331735 -117318561 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 961 252 0 0 0 chrX 49331735 49331762 -117318534 + (GA)n Simple_repeat Simple_repeat 1 28 0 6 961 316 321 70 42 chrX 49332083 49332226 -117318070 - B1_Mur1 SINE Alu -1 148 2 6 961 707 193 56 21 chrX 49332293 49332436 -117317860 + B1_Mur2 SINE Alu 2 149 0 6 961 891 184 9 71 chrX 49333148 49333359 -117316937 + B3A SINE B2 1 198 0 6 961 1150 92 6 0 chrX 49333874 49334038 -117316258 - B2_Mm1t SINE B2 -28 165 1 6 961 1789 242 34 7 chrX 49335097 49335505 -117314791 - MTD LTR MaLR 0 419 1 6 961 637 337 22 55 chrX 49335612 49335885 -117314411 + B4A SINE B4 2 265 -27 6 961 324 83 0 0 chrX 49335925 49335973 -117314323 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 961 4054 237 45 94 chrX 49336388 49337451 -117312845 + RMER1C Other Other 62 1054 -288 6 961 1308 114 5 5 chrX 49337451 49337636 -117312660 + B2_Mm2 SINE B2 2 186 -9 6 961 4054 237 45 94 chrX 49337636 49337919 -117312377 + RMER1C Other Other 1055 1342 0 6 961 195 184 0 0 chrX 49337921 49337959 -117312337 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 961 308 298 0 23 chrX 49338168 49338254 -117312042 + B4 SINE B4 1 84 -208 6 961 483 18 0 0 chrX 49338254 49338310 -117311986 + (CA)n Simple_repeat Simple_repeat 2 57 0 6 961 5481 169 63 27 chrX 49338548 49339628 -117310668 - Lx2B LINE L1 -1 6999 5881 6 961 2539 143 8 8 chrX 49339629 49340024 -117310272 + Lx2B LINE L1 5477 5871 -15 6 961 3600 13 2 0 chrX 49340181 49340576 -117309720 - MTA_Mm LTR MaLR 0 396 1 6 961 9358 31 4 1 chrX 49340576 49341671 -117308625 - MTA_Mm-int LTR MaLR 0 1098 1 6 961 3588 15 2 0 chrX 49341671 49342066 -117308230 - MTA_Mm LTR MaLR 0 396 1 6 961 215 254 16 0 chrX 49343035 49343098 -117307198 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 6 961 526 299 89 11 chrX 49343198 49343377 -117306919 - B4A SINE B4 -99 193 1 6 961 233 316 96 55 chrX 49344063 49344281 -117306015 + MIRc SINE MIR 37 263 -5 6 961 709 308 5 11 chrX 49345044 49345228 -117305068 - ID_B1 SINE B4 -10 214 32 6 961 237 65 0 0 chrX 49345347 49345378 -117304918 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 6 961 195 42 0 0 chrX 49345391 49345415 -117304881 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 6 961 843 165 0 8 chrX 49345415 49345549 -117304747 - B1_Mus2 SINE Alu -13 134 2 6 961 241 311 37 37 chrX 49345616 49345803 -117304493 + L1ME2z LINE L1 6256 6442 -2 6 961 809 238 62 113 chrX 49346246 49346521 -117303775 + B4 SINE B4 32 292 0 6 961 854 187 0 0 chrX 49347029 49347168 -117303128 - B1_Mur4 SINE Alu -9 141 3 6 961 2191 121 15 6 chrX 49347270 49347604 -117302692 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 961 6775 47 13 19 chrX 49347606 49348461 -117301835 - IAPEz-int LTR ERVK -2 6479 5630 6 961 22657 71 38 9 chrX 49348447 49351431 -117298865 - IAPEz-int LTR ERVK -3405 3076 8 6 961 2191 121 15 6 chrX 49351431 49351765 -117298531 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 961 227 196 39 0 chrX 49351801 49351852 -117298444 - Lx8 LINE L1 -1564 5909 5857 6 961 240 320 37 55 chrX 49351878 49351987 -117298309 + B1F SINE Alu 2 108 -41 6 961 198 0 0 0 chrX 49353946 49353968 -117296328 + (A)n Simple_repeat Simple_repeat 1 22 0 6 961 4590 63 0 5 chrX 49354575 49355147 -117295149 - L1_Mus2 LINE L1 -71 6495 5927 6 961 3131 87 0 2 chrX 49355142 49355579 -117294717 - MusHAL1 LINE L1 -1298 1414 979 6 961 345 24 0 0 chrX 49356120 49356162 -117294134 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 961 482 302 24 0 chrX 49357735 49357861 -117292435 + ID_B1 SINE B4 84 212 -12 6 961 769 244 94 30 chrX 49357880 49358083 -117292213 + B3 SINE B2 1 216 0 6 961 460 282 92 0 chrX 49358231 49358362 -117291934 + ID_B1 SINE B4 82 224 0 6 961 192 294 47 12 chrX 49358508 49358594 -117291702 + L2a LINE L2 3283 3371 -55 6 961 316 183 0 137 chrX 49358835 49358930 -117291366 + L1MB2 LINE L1 3602 3683 -2457 6 961 1205 243 51 0 chrX 49358923 49359282 -117291014 - Lx5 LINE L1 -653 6807 6210 6 961 2018 308 22 14 chrX 49359285 49359867 -117290429 + Lx5 LINE L1 6460 7046 -4 6 961 273 165 128 12 chrX 49359879 49359965 -117290331 + L1MB2 LINE L1 3678 3773 -2367 6 961 953 329 8 0 chrX 49359968 49360223 -117290073 + Tigger7 DNA MER2_type 16 272 -2219 6 961 438 139 0 0 chrX 49360241 49360313 -117289983 + (TTC)n Simple_repeat Simple_repeat 1 72 0 6 961 2362 136 62 3 chrX 49360327 49360696 -117289600 - ORR1B1 LTR MaLR -3 391 1 6 961 265 192 0 151 chrX 49360720 49360806 -117289490 - B1F2 SINE Alu -67 82 10 6 961 858 299 40 0 chrX 49360820 49361121 -117289175 + Tigger7 DNA MER2_type 295 607 -1884 6 961 295 265 20 39 chrX 49361104 49361206 -117289090 + Tigger7 DNA MER2_type 2392 2491 0 6 961 1006 266 139 12 chrX 49361216 49361639 -117288657 + L1MB2 LINE L1 3790 4266 -1874 6 961 1046 250 106 47 chrX 49361698 49362218 -117288078 + L1MB2 LINE L1 5103 5653 -518 6 961 478 54 27 0 chrX 49362218 49362292 -117288004 + (TA)n Simple_repeat Simple_repeat 1 76 0 6 961 1046 299 79 92 chrX 49362292 49362351 -117287945 + L1MB2 LINE L1 5654 5714 -457 6 961 1108 85 0 0 chrX 49362351 49362492 -117287804 + B1_Mus1 SINE Alu 2 142 -6 6 961 585 0 0 0 chrX 49362494 49362559 -117287737 + (GAAA)n Simple_repeat Simple_repeat 1 65 0 6 961 1046 299 79 92 chrX 49362559 49362743 -117287553 + L1MB2 LINE L1 5715 5851 -320 6 961 1005 90 0 8 chrX 49362743 49362877 -117287419 + B1_Mus1 SINE Alu 2 134 -14 6 961 522 0 0 0 chrX 49362877 49362935 -117287361 + (TA)n Simple_repeat Simple_repeat 1 58 0 6 961 1046 299 79 92 chrX 49362935 49363213 -117287083 + L1MB2 LINE L1 5852 6148 -23 6 961 468 324 11 38 chrX 49363293 49363479 -117286817 + ID_B1 SINE B4 13 193 -31 6 961 640 89 20 0 chrX 49363516 49363617 -117286679 + (GA)n Simple_repeat Simple_repeat 2 104 0 6 961 549 0 0 0 chrX 49363619 49363680 -117286616 + (GGAA)n Simple_repeat Simple_repeat 1 61 0 6 961 1067 107 0 13 chrX 49363686 49363838 -117286458 - L1_Mur2 LINE L1 -225 5652 5503 6 961 4543 217 47 18 chrX 49363837 49364793 -117285503 + Lx5 LINE L1 6062 7045 -5 6 961 725 259 18 99 chrX 49365111 49365161 -117285135 + B3 SINE B2 2 49 -167 6 961 1467 47 10 25 chrX 49365161 49365358 -117284938 + B2_Mm2 SINE B2 1 194 -1 6 961 725 259 18 99 chrX 49365358 49365530 -117284766 + B3 SINE B2 50 206 -10 6 961 628 254 49 0 chrX 49365533 49365675 -117284621 + B1_Mur1 SINE Alu 1 149 0 6 961 982 232 5 31 chrX 49365859 49366081 -117284215 + B3 SINE B2 1 216 0 6 961 229 316 13 0 chrX 49366573 49366652 -117283644 - MamRep434 DNA TcMar -297 129 50 6 961 568 223 108 0 chrX 49367201 49367340 -117282956 + MIRb SINE MIR 64 217 -51 6 961 1512 255 31 6 chrX 49367350 49367701 -117282595 + ORR1D2 LTR MaLR 6 365 -5 6 961 27 29 0 0 chrX 49367792 49367826 -117282470 + AT_rich Low_complexity Low_complexity 1 34 0 6 961 1023 243 93 36 chrX 49368253 49368586 -117281710 - MTEa LTR MaLR -8 371 20 6 961 2021 168 70 20 chrX 49368888 49369289 -117281007 + MTC LTR MaLR 1 421 0 7 961 226 106 0 41 chrX 49369525 49369574 -117280722 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 961 268 328 87 25 chrX 49369699 49369902 -117280394 + MIR SINE MIR 16 234 -34 7 961 1494 72 0 5 chrX 49370059 49370254 -117280042 - B2_Mm2 SINE B2 -1 194 1 7 961 760 233 27 0 chrX 49370291 49370437 -117279859 - RSINE1 SINE B4 -14 151 2 7 961 396 0 0 0 chrX 49371165 49371209 -117279087 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 961 219 139 0 0 chrX 49371212 49371248 -117279048 + (CGTG)n Simple_repeat Simple_repeat 4 39 0 7 961 540 286 15 15 chrX 49371606 49371619 -117278677 - RSINE1 SINE B4 -6 159 147 7 961 264 30 0 0 chrX 49371619 49371652 -117278644 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 961 540 286 15 15 chrX 49371652 49371773 -117278523 - RSINE1 SINE B4 -19 146 25 7 961 262 327 35 0 chrX 49371823 49371936 -117278360 + B1_Mus1 SINE Alu 30 146 -2 7 961 232 267 65 32 chrX 49371951 49372044 -117278252 + B4A SINE B4 118 213 -79 7 961 202 170 43 0 chrX 49372205 49372252 -117278044 + CT-rich Low_complexity Low_complexity 1 49 0 7 961 271 175 127 0 chrX 49372332 49372395 -117277901 + B4A SINE B4 204 274 -18 7 961 572 156 0 9 chrX 49372521 49372631 -117277665 + GA-rich Low_complexity Low_complexity 4 112 0 7 961 347 265 32 32 chrX 49372856 49373012 -117277284 + (CCTG)n Simple_repeat Simple_repeat 2 157 0 7 961 672 282 30 52 chrX 49373143 49373412 -117276884 + MER33 DNA MER1_type 6 268 -56 7 961 7670 63 1 12 chrX 49374826 49375967 -117274329 + L1_Mus1 LINE L1 5444 6566 -1 7 961 381 93 0 0 chrX 49376055 49376109 -117274187 + (TCC)n Simple_repeat Simple_repeat 1 54 0 7 961 1061 154 81 5 chrX 49376125 49376334 -117273962 + URR1A DNA MER1_type 2 226 0 7 961 338 229 17 52 chrX 49376349 49376464 -117273832 - MER33 DNA MER1_type -54 270 160 7 961 878 73 0 8 chrX 49376784 49376908 -117273388 + (GAAAA)n Simple_repeat Simple_repeat 3 125 0 7 961 211 351 9 0 chrX 49377542 49377653 -117272643 - L2a LINE L2 -3 3423 3312 7 961 218 376 36 18 chrX 49378313 49378424 -117271872 + L3 LINE CR1 3115 3227 -1262 7 961 357 234 131 0 chrX 49378797 49378904 -117271392 + MER57F LTR ERV1 1 121 -315 7 961 224 0 65 0 chrX 49378906 49378937 -117271359 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 7 961 785 228 0 64 chrX 49379064 49379284 -117271012 - B3 SINE B2 -10 206 1 7 961 270 287 131 8 chrX 49379334 49379463 -117270833 - B1F SINE Alu -2 147 1 7 961 321 26 0 0 chrX 49381537 49381575 -117268721 + (CAA)n Simple_repeat Simple_repeat 2 39 0 7 961 677 103 0 18 chrX 49382625 49382734 -117267562 + (GAAA)n Simple_repeat Simple_repeat 2 108 0 7 961 230 341 106 0 chrX 49384396 49384481 -117265815 + PB1D10 SINE Alu 3 96 -21 7 961 206 316 144 8 chrX 49384710 49384828 -117265468 + MIRb SINE MIR 125 258 -10 7 961 1808 160 101 30 chrX 49385537 49385905 -117264391 - ORR1B1 LTR MaLR 0 394 1 7 961 625 267 161 0 chrX 49385988 49386168 -117264128 + ID_B1 SINE B4 16 224 0 7 961 707 112 9 0 chrX 49386523 49386639 -117263657 + (GGA)n Simple_repeat Simple_repeat 3 119 0 7 961 233 29 29 0 chrX 49386837 49386871 -117263425 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 961 1460 246 35 27 chrX 49386884 49387260 -117263036 - MTEa LTR MaLR 0 379 1 7 961 279 0 0 0 chrX 49387546 49387577 -117262719 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 7 961 284 286 0 0 chrX 49387577 49387640 -117262656 - RSINE1 SINE B4 -6 159 97 7 961 442 267 26 8 chrX 49387686 49387803 -117262493 - RSINE1 SINE B4 -36 129 11 7 961 237 309 25 0 chrX 49387909 49387990 -117262306 + ID SINE ID 4 86 -138 7 961 229 115 0 88 chrX 49387990 49388010 -117262286 + A-rich Low_complexity Low_complexity 3 22 0 7 961 1207 145 17 0 chrX 49388010 49388189 -117262107 + B2_Mm2 SINE B2 2 183 -12 7 961 229 115 0 88 chrX 49388189 49388225 -117262071 + A-rich Low_complexity Low_complexity 23 54 0 7 961 649 287 52 0 chrX 49388751 49388981 -117261315 + L1MA4 LINE L1 5693 5934 -366 7 961 216 67 0 0 chrX 49388981 49389011 -117261285 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 961 492 192 0 0 chrX 49389040 49389139 -117261157 + (TAG)n Simple_repeat Simple_repeat 3 101 0 7 961 567 0 0 0 chrX 49389270 49389333 -117260963 + (CA)n Simple_repeat Simple_repeat 2 64 0 7 961 364 315 152 12 chrX 49389521 49389685 -117260611 + Tigger5 DNA MER2_type 56 242 -2164 7 961 192 77 0 0 chrX 49389724 49389750 -117260546 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 7 961 344 341 24 35 chrX 49390170 49390340 -117259956 + MLT1L LTR MaLR 258 425 -185 7 961 866 269 0 5 chrX 49390405 49390603 -117259693 + RMER30 DNA MER1_type 2 198 -4 7 961 9102 9 0 0 chrX 49390624 49391627 -117258669 - L1Md_A LINE L1 0 5883 4881 7 961 6196 14 1 0 chrX 49391628 49392287 -117258009 + L1Md_A LINE L1 5923 6582 0 7 961 385 350 8 0 chrX 49392832 49392955 -117257341 + MER5A DNA MER1_type 60 183 -6 7 961 282 387 36 0 chrX 49393102 49393213 -117257083 + MIRm SINE MIR 162 276 0 7 961 1364 286 60 18 chrX 49393255 49393640 -117256656 + MTD LTR MaLR 5 405 -14 7 961 224 309 28 93 chrX 49393732 49393839 -117256457 + PB1D10 SINE Alu 6 105 -12 7 961 209 292 27 14 chrX 49394523 49394596 -117255700 + CT-rich Low_complexity Low_complexity 3 76 0 7 961 221 0 35 0 chrX 49394605 49394634 -117255662 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 7 961 1334 41 0 0 chrX 49394634 49394780 -117255516 - B1_Mus1 SINE Alu -2 146 1 7 961 508 304 51 39 chrX 49394782 49394960 -117255336 - ID_B1 SINE B4 0 224 45 7 961 1025 213 96 5 chrX 49396087 49396285 -117254011 + ID_B1 SINE B4 3 218 -6 7 961 1180 223 0 5 chrX 49396698 49396914 -117253382 - B3 SINE B2 -1 215 1 7 961 672 13 0 0 chrX 49397444 49397521 -117252775 + (GA)n Simple_repeat Simple_repeat 2 78 0 7 961 1356 13 0 0 chrX 49398165 49398314 -117251982 + L1Md_F3 LINE L1 5988 6136 -448 7 961 7800 39 0 8 chrX 49398316 49399202 -117251094 + L1Md_F2 LINE L1 5692 6570 -12 7 961 259 325 60 0 chrX 49399215 49399298 -117250998 + PB1D7 SINE Alu 1 88 -32 7 961 380 312 56 8 chrX 49399224 49399350 -117250946 + ID_B1 SINE B4 91 222 -2 7 961 1222 74 0 20 chrX 49399426 49399577 -117250719 - B1_Mus1 SINE Alu 0 148 1 7 961 566 335 101 35 chrX 49399604 49399861 -117250435 + B4A SINE B4 5 278 -14 7 961 477 52 0 38 chrX 49399867 49399947 -117250349 + (CA)n Simple_repeat Simple_repeat 1 77 0 7 961 193 300 116 61 chrX 49400547 49400728 -117249568 + MIRb SINE MIR 1 191 -77 7 961 1059 171 272 10 chrX 49400771 49401061 -117249235 + ORR1C1 LTR MaLR 2 367 -11 7 961 244 304 87 0 chrX 49401945 49402014 -117248282 + ID2 SINE ID 2 76 -7 7 961 525 289 0 0 chrX 49402062 49402183 -117248113 + PB1 SINE Alu 4 124 -3 7 961 363 23 0 0 chrX 49402324 49402368 -117247928 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 961 389 265 29 29 chrX 49402925 49403030 -117247266 - ID_B1 SINE B4 -118 106 2 7 961 1281 123 37 14 chrX 49403252 49403467 -117246829 - URR1A DNA MER1_type 0 226 7 7 961 555 118 0 0 chrX 49405853 49405938 -117244358 + (GA)n Simple_repeat Simple_repeat 1 85 0 7 961 1061 124 0 11 chrX 49405943 49406123 -117244173 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 7 961 462 265 33 41 chrX 49407811 49407933 -117242363 + B1F SINE Alu 18 138 -11 7 961 967 250 19 19 chrX 49408149 49408365 -117241931 + B3 SINE B2 1 216 0 7 961 1262 120 11 27 chrX 49411115 49411303 -117238993 - B2_Mm2 SINE B2 -10 185 1 7 961 515 53 13 0 chrX 49411321 49411396 -117238900 + (TG)n Simple_repeat Simple_repeat 1 76 0 7 961 273 150 224 15 chrX 49411414 49411517 -117238779 - B2_Mm2 SINE B2 -43 155 15 7 961 239 259 13 8 chrX 49413180 49413299 -117236997 + Lx8 LINE L1 7392 7462 -11 7 961 737 22 11 0 chrX 49413504 49413595 -117236701 + (GA)n Simple_repeat Simple_repeat 1 92 0 7 962 340 324 14 61 chrX 49414214 49414267 -117236029 + ID SINE ID 36 81 -143 7 962 451 250 0 0 chrX 49414267 49414363 -117235933 + PB1D10 SINE Alu 1 96 -21 7 962 250 64 0 78 chrX 49415354 49415405 -117234891 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 7 962 688 242 152 42 chrX 49415445 49415682 -117234614 - B4 SINE B4 -28 264 2 7 962 3525 150 20 10 chrX 49416612 49417197 -117233099 + Lx LINE L1 5940 6530 -124 7 962 261 0 0 0 chrX 49417752 49417781 -117232515 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 962 306 315 26 18 chrX 49418138 49418251 -117232045 - MIR3 SINE MIR -9 199 86 7 962 274 324 38 9 chrX 49418489 49418595 -117231701 + PB1D10 SINE Alu 1 109 -8 7 962 424 198 151 0 chrX 49419992 49420078 -117230218 - B1_Mur3 SINE Alu -50 99 1 7 962 696 24 0 0 chrX 49420085 49420167 -117230129 + (TTTC)n Simple_repeat Simple_repeat 1 82 0 7 962 879 45 0 9 chrX 49420180 49420292 -117230004 - B1_Mus1 SINE Alu 0 148 38 7 962 459 217 0 12 chrX 49421504 49421588 -117228708 + ID2 SINE ID 1 83 0 7 962 254 233 50 0 chrX 49422072 49422132 -117228164 + GA-rich Low_complexity Low_complexity 4 66 0 7 962 198 0 0 0 chrX 49422726 49422748 -117227548 + (CA)n Simple_repeat Simple_repeat 2 23 0 7 962 279 0 0 0 chrX 49422748 49422778 -117227518 + (TC)n Simple_repeat Simple_repeat 1 31 0 7 962 25 51 0 0 chrX 49423513 49423552 -117226744 + AT_rich Low_complexity Low_complexity 1 39 0 8 962 239 0 32 0 chrX 49424877 49424908 -117225388 + (TTA)n Simple_repeat Simple_repeat 2 33 0 8 962 237 245 12 25 chrX 49425807 49425896 -117224400 + MER94 DNA AcHobo 48 134 0 8 962 243 0 0 0 chrX 49426184 49426211 -117224085 + (A)n Simple_repeat Simple_repeat 1 27 0 8 962 817 170 0 7 chrX 49426271 49426407 -117223889 - MTD LTR MaLR -162 257 123 8 962 370 0 40 0 chrX 49427031 49427081 -117223215 + (TG)n Simple_repeat Simple_repeat 1 52 0 8 962 318 67 0 0 chrX 49427081 49427126 -117223170 + (GA)n Simple_repeat Simple_repeat 2 46 0 8 962 268 284 182 0 chrX 49428173 49428261 -117222035 + ID_B1 SINE B4 84 187 -37 8 962 189 74 0 0 chrX 49428275 49428302 -117221994 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 8 962 1027 186 41 0 chrX 49428401 49428595 -117221701 - URR1B DNA MER1_type -4 221 20 8 962 229 295 60 60 chrX 49429164 49429247 -117221049 + RSINE1 SINE B4 79 161 -4 8 962 22 0 0 0 chrX 49429315 49429337 -117220959 + AT_rich Low_complexity Low_complexity 1 22 0 8 962 441 87 7 7 chrX 49429337 49429414 -117220882 - B1_Mus2 SINE Alu 0 120 44 8 962 668 321 89 63 chrX 49430060 49430519 -117219777 - MLT2B2 LTR ERVL -10 505 35 8 962 1426 92 16 0 chrX 49430604 49430789 -117219507 + B2_Mm2 SINE B2 2 189 -6 8 962 203 179 26 0 chrX 49430794 49430833 -117219463 + MER5A DNA MER1_type 78 117 -72 8 962 575 173 0 55 chrX 49431665 49431775 -117218521 - PB1D9 SINE Alu 0 120 17 8 962 255 125 25 0 chrX 49433346 49433386 -117216910 + (GAA)n Simple_repeat Simple_repeat 1 41 0 8 962 586 174 5 53 chrX 49433386 49433574 -117216722 + A-rich Low_complexity Low_complexity 2 180 0 8 962 3112 38 3 0 chrX 49434722 49435067 -117215229 + ORR1A1 LTR MaLR 1 346 0 8 962 208 280 0 0 chrX 49435788 49435838 -117214458 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 962 1147 87 0 47 chrX 49436039 49436209 -117214087 - B2_Mm2 SINE B2 -33 162 1 8 962 864 245 78 21 chrX 49436219 49436553 -117213743 - L1MA6 LINE L1 0 6300 5948 8 962 622 280 111 4 chrX 49436576 49436802 -117213494 - L1MA6 LINE L1 -461 5851 5602 8 962 387 0 0 0 chrX 49436960 49437003 -117213293 + (T)n Simple_repeat Simple_repeat 1 43 0 8 962 1609 106 39 72 chrX 49437383 49437689 -117212607 - Lx9 LINE L1 -2 7642 7347 8 962 517 266 33 57 chrX 49437694 49437905 -117212391 - L1M5 LINE L1 -373 5751 5546 8 962 1031 141 10 89 chrX 49438446 49438648 -117211648 + B2_Mm2 SINE B2 1 186 -9 8 962 221 276 25 50 chrX 49438648 49438728 -117211568 + B4A SINE B4 4 81 -211 8 962 743 214 97 46 chrX 49438658 49438854 -117211442 + B3 SINE B2 11 216 0 8 962 1215 44 0 0 chrX 49438855 49438992 -117211304 + B1_Mus2 SINE Alu 1 137 -10 8 962 297 0 0 0 chrX 49438992 49439025 -117211271 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 8 962 842 239 0 66 chrX 49439318 49439529 -117210767 + B3A SINE B2 1 197 -1 8 962 1205 88 0 0 chrX 49439538 49439686 -117210610 + B1_Mus1 SINE Alu 1 148 0 8 962 475 266 79 37 chrX 49440518 49440682 -117209614 - MIR3 SINE MIR -7 201 31 8 962 280 308 18 61 chrX 49441290 49441404 -117208892 + RSINE1 SINE B4 51 159 -6 8 962 30 45 0 0 chrX 49441413 49441457 -117208839 + AT_rich Low_complexity Low_complexity 1 44 0 8 962 21 36 0 0 chrX 49441628 49441656 -117208640 + AT_rich Low_complexity Low_complexity 1 28 0 8 962 260 279 0 60 chrX 49443543 49443627 -117206669 + ID4_ SINE ID 3 81 -2 8 962 292 162 46 149 chrX 49447144 49447231 -117203065 + MT2B LTR ERVL 163 240 -361 8 962 386 233 48 33 chrX 49447158 49447248 -117203048 + B1_Mur4 SINE Alu 9 100 -17 8 962 432 239 186 8 chrX 49447336 49447454 -117202842 - B1_Mur1 SINE Alu -6 143 5 8 962 495 0 0 0 chrX 49448401 49448456 -117201840 + (TG)n Simple_repeat Simple_repeat 2 56 0 8 962 780 232 23 45 chrX 49448531 49448707 -117201589 - B3 SINE B2 -6 210 39 8 962 275 271 17 0 chrX 49448707 49448766 -117201530 + ID_B1 SINE B4 155 214 -10 8 962 431 222 0 0 chrX 49448978 49449050 -117201246 + ID4_ SINE ID 3 74 -9 8 962 212 59 29 0 chrX 49449066 49449100 -117201196 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 8 962 1203 220 0 9 chrX 49449409 49449611 -117200685 + B3 SINE B2 2 203 -13 8 962 375 23 0 0 chrX 49449611 49449655 -117200641 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 962 838 177 22 8 chrX 49450637 49450804 -117199492 - B3 SINE B2 -19 176 1 8 962 243 0 0 0 chrX 49451076 49451103 -117199193 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 962 522 277 36 0 chrX 49451127 49451239 -117199057 - ID_B1 SINE B4 -18 206 91 8 962 1258 68 0 0 chrX 49451421 49451567 -117198729 + B1_Mus2 SINE Alu 2 147 0 8 962 398 254 30 30 chrX 49451600 49451734 -117198562 + L1MA4 LINE L1 5756 5889 -411 8 962 725 325 48 18 chrX 49452127 49452465 -117197831 + L1MB7 LINE L1 5699 6047 -137 8 962 423 38 0 0 chrX 49453475 49453528 -117196768 + (TG)n Simple_repeat Simple_repeat 1 53 0 8 962 324 0 0 0 chrX 49453528 49453564 -117196732 + (GA)n Simple_repeat Simple_repeat 2 37 0 8 962 434 65 16 0 chrX 49453831 49453893 -117196403 + (TG)n Simple_repeat Simple_repeat 1 63 0 8 962 346 306 56 69 chrX 49455611 49455755 -117194541 + ID_B1 SINE B4 80 221 -3 8 962 271 348 48 55 chrX 49456270 49456416 -117193880 + B4 SINE B4 60 204 -88 8 962 647 265 7 7 chrX 49456313 49456450 -117193846 + B1_Mur1 SINE Alu 13 149 0 8 962 297 232 0 127 chrX 49456513 49456592 -117193704 + ID4 SINE ID 3 71 -12 8 962 572 323 12 37 chrX 49458704 49458865 -117191431 + B4A SINE B4 109 265 -27 8 962 321 109 0 0 chrX 49458867 49458922 -117191374 + (CA)n Simple_repeat Simple_repeat 2 56 0 8 962 1206 214 64 144 chrX 49459138 49459227 -117191069 + MTEa LTR MaLR 1 95 -284 8 962 1264 49 0 0 chrX 49459227 49459371 -117190925 + B1_Mus2 SINE Alu 4 147 0 8 962 1206 214 64 144 chrX 49459371 49459690 -117190606 + MTEa LTR MaLR 96 376 -3 8 962 521 104 330 0 chrX 49459735 49459841 -117190455 + B1_Mus1 SINE Alu 7 147 -1 8 962 557 291 24 60 chrX 49460002 49460170 -117190126 - RSINE1 SINE B4 0 165 4 8 962 212 329 0 28 chrX 49460440 49460512 -117189784 + ID2 SINE ID 9 78 -5 8 962 759 138 181 50 chrX 49460649 49460809 -117189487 - B2_Mm2 SINE B2 -14 181 1 8 962 315 0 0 0 chrX 49460830 49460865 -117189431 + (TG)n Simple_repeat Simple_repeat 1 35 0 8 962 324 0 0 0 chrX 49460865 49460900 -117189396 + (GA)n Simple_repeat Simple_repeat 1 36 0 8 962 555 288 83 0 chrX 49460933 49461065 -117189231 - B3A SINE B2 -54 144 2 8 962 21 0 0 0 chrX 49461569 49461590 -117188706 + AT_rich Low_complexity Low_complexity 1 21 0 8 962 274 273 21 74 chrX 49462042 49462137 -117188159 + B3A SINE B2 109 198 0 8 962 207 189 0 0 chrX 49462139 49462176 -117188120 + (TATATG)n Simple_repeat Simple_repeat 5 41 0 8 962 654 205 34 0 chrX 49462269 49462386 -117187910 + RSINE1 SINE B4 4 124 -41 8 962 330 26 0 0 chrX 49462386 49462425 -117187871 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 962 414 0 0 0 chrX 49462425 49462470 -117187826 + (GA)n Simple_repeat Simple_repeat 2 47 0 8 962 339 168 0 0 chrX 49462676 49462771 -117187525 + (TCTG)n Simple_repeat Simple_repeat 2 96 0 8 962 923 283 115 44 chrX 49462778 49463255 -117187041 + CR1_Mam LINE CR1 640 1150 -1054 8 962 258 32 0 0 chrX 49463497 49463528 -117186768 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 8 962 601 310 106 31 chrX 49463947 49464240 -117186056 + Tigger15a DNA TcMar 332 646 -69 8 962 336 303 53 44 chrX 49464478 49464592 -117185704 - RSINE1 SINE B4 -3 162 48 8 962 270 0 0 0 chrX 49464608 49464638 -117185658 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 8 962 613 287 6 31 chrX 49464656 49464818 -117185478 - RSINE1 SINE B4 0 165 8 8 962 677 176 69 39 chrX 49466622 49466752 -117183544 - B3 SINE B2 -81 135 2 8 962 343 353 64 15 chrX 49466897 49467101 -117183195 - L1MB8 LINE L1 -40 6138 5925 8 962 279 0 0 0 chrX 49467578 49467609 -117182687 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 962 287 305 27 54 chrX 49469411 49469522 -117180774 - PB1 SINE Alu -17 110 3 8 962 180 320 0 20 chrX 49470306 49470357 -117179939 - MIRm SINE MIR -141 135 86 8 962 294 29 0 0 chrX 49470856 49470891 -117179405 + (TCTG)n Simple_repeat Simple_repeat 3 37 0 8 962 571 291 148 0 chrX 49471503 49471685 -117178611 + ID_B1 SINE B4 1 209 -15 8 962 239 236 41 14 chrX 49471991 49472064 -117178232 + ID4_ SINE ID 2 76 -7 8 962 732 143 230 7 chrX 49472187 49472335 -117177961 + B2_Mm2 SINE B2 1 181 -14 8 962 510 17 0 0 chrX 49473637 49473696 -117176600 + (TTTC)n Simple_repeat Simple_repeat 1 59 0 8 962 1120 123 20 60 chrX 49474807 49475006 -117175290 - B2_Mm2 SINE B2 -4 191 1 8 962 612 135 96 0 chrX 49475167 49475271 -117175025 - B1_Mur4 SINE Alu -10 140 27 8 962 460 297 65 0 chrX 49475455 49475593 -117174703 + RSINE1 SINE B4 3 149 -16 8 962 192 125 0 0 chrX 49475611 49475643 -117174653 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 962 941 123 7 7 chrX 49475971 49476110 -117174186 + B1_Mur2 SINE Alu 1 139 -10 8 962 207 100 0 0 chrX 49476110 49476140 -117174156 + (TAA)n Simple_repeat Simple_repeat 2 31 0 9 962 283 226 0 0 chrX 49476171 49476224 -117174072 + ID_B1 SINE B4 146 198 -26 9 962 417 294 223 38 chrX 49476876 49477060 -117173236 + B4A SINE B4 21 238 -54 9 962 324 0 0 0 chrX 49477078 49477114 -117173182 + (CA)n Simple_repeat Simple_repeat 1 36 0 9 962 210 267 0 22 chrX 49478034 49478080 -117172216 + ID4_ SINE ID 3 47 -36 9 962 340 236 236 0 chrX 49478155 49478261 -117172035 - ID_B1 SINE B4 0 224 94 9 962 286 315 171 16 chrX 49478261 49478284 -117172012 - B1F SINE Alu 0 149 1 9 962 1078 207 34 10 chrX 49478338 49478543 -117171753 + B3 SINE B2 4 213 -3 9 962 244 268 36 134 chrX 49478818 49478930 -117171366 - PB1D10 SINE Alu -14 103 3 9 962 342 0 0 0 chrX 49478956 49478994 -117171302 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 962 732 59 0 0 chrX 49478994 49479096 -117171200 + (GA)n Simple_repeat Simple_repeat 1 102 0 9 962 879 92 0 0 chrX 49479096 49479227 -117171069 + (GGA)n Simple_repeat Simple_repeat 2 132 0 9 962 268 239 136 43 chrX 49479733 49479754 -117170542 + L1MB8 LINE L1 5955 5972 -206 9 962 549 238 103 0 chrX 49479754 49479880 -117170416 + B1F SINE Alu 2 140 -9 9 962 268 221 158 21 chrX 49479880 49480021 -117170275 + L1MB8 LINE L1 5973 6140 -44 9 962 237 284 75 0 chrX 49481337 49481404 -117168892 - tRNA-Ala-GCY_ tRNA tRNA -3 72 1 9 962 845 107 0 8 chrX 49483500 49483632 -117166664 + (TTTC)n Simple_repeat Simple_repeat 3 133 0 9 962 419 69 0 0 chrX 49483863 49483921 -117166375 - L1_Mus2 LINE L1 -511 6055 5998 9 962 198 0 0 0 chrX 49484119 49484141 -117166155 + (T)n Simple_repeat Simple_repeat 1 22 0 9 962 532 290 58 58 chrX 49484245 49484520 -117165776 + L1MB5 LINE L1 5559 5833 -341 9 962 372 43 0 0 chrX 49484634 49484680 -117165616 + (TG)n Simple_repeat Simple_repeat 2 47 0 9 962 575 81 0 11 chrX 49485033 49485120 -117165176 + (GAAA)n Simple_repeat Simple_repeat 3 88 0 9 962 982 230 0 26 chrX 49485183 49485375 -117164921 - B3 SINE B2 -28 188 2 9 962 197 196 18 0 chrX 49485545 49485601 -117164695 + CT-rich Low_complexity Low_complexity 1 57 0 9 962 499 228 45 45 chrX 49485754 49485887 -117164409 + B1F2 SINE Alu 16 148 -1 9 962 482 320 57 42 chrX 49485864 49486076 -117164220 - B4A SINE B4 -76 216 2 9 962 299 340 29 10 chrX 49486224 49486328 -117163968 + MLT1A1 LTR MaLR 22 127 -281 9 962 283 259 70 11 chrX 49486516 49486621 -117163675 + ORR1E LTR MaLR 267 372 -2 9 962 1475 70 27 0 chrX 49486737 49486923 -117163373 + B2_Mm2 SINE B2 2 192 -3 9 962 889 292 90 11 chrX 49487005 49487272 -117163024 + B4 SINE B4 5 292 0 9 962 225 196 0 0 chrX 49487300 49487356 -117162940 + (CA)n Simple_repeat Simple_repeat 1 56 0 9 962 287 300 0 0 chrX 49487360 49487440 -117162856 + GA-rich Low_complexity Low_complexity 1 80 0 9 962 961 287 131 16 chrX 49488019 49488442 -117161854 + Tigger9b DNA MER2_type 2 473 -151 9 962 1293 266 28 40 chrX 49488481 49488947 -117161349 + L1MC1 LINE L1 5460 5952 -1833 9 962 664 262 123 8 chrX 49488939 49489174 -117161122 + L1MC1 LINE L1 6054 6315 -18 9 962 819 204 20 20 chrX 49489204 49489354 -117160942 + B3 SINE B2 11 160 -56 9 962 489 133 10 20 chrX 49490367 49490467 -117159829 + GA-rich Low_complexity Low_complexity 3 101 0 9 962 225 0 0 0 chrX 49491040 49491065 -117159231 + (T)n Simple_repeat Simple_repeat 1 25 0 9 962 336 143 0 0 chrX 49492182 49492238 -117158058 + (T)n Simple_repeat Simple_repeat 1 56 0 9 962 752 263 28 11 chrX 49492249 49492426 -117157870 - ID_B1 SINE B4 -9 215 36 9 962 676 257 14 31 chrX 49492523 49492721 -117157575 - B3A SINE B2 -8 187 3 9 962 516 256 16 16 chrX 49492722 49492849 -117157447 + ID_B1 SINE B4 94 220 -4 9 962 204 67 0 0 chrX 49492850 49492880 -117157416 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 9 962 489 17 0 0 chrX 49492880 49492937 -117157359 + (TA)n Simple_repeat Simple_repeat 2 59 0 9 962 32 0 0 0 chrX 49493000 49493032 -117157264 + AT_rich Low_complexity Low_complexity 1 32 0 9 962 279 239 0 74 chrX 49493832 49493927 -117156369 - L2c LINE L2 -10 3377 3290 9 962 587 230 24 17 chrX 49493953 49494105 -117156191 - ID_B1 SINE B4 -54 238 85 9 962 358 257 170 38 chrX 49495152 49495387 -117154909 + Tigger15a DNA TcMar 103 368 -347 9 962 314 318 32 39 chrX 49495540 49495694 -117154602 - MIR3 SINE MIR -12 196 44 9 962 799 276 0 0 chrX 49495945 49496108 -117154188 + RSINE1 SINE B4 3 165 0 9 962 23 33 0 0 chrX 49496115 49496145 -117154151 + AT_rich Low_complexity Low_complexity 1 30 0 9 962 1123 172 99 0 chrX 49496154 49496346 -117153950 + B3 SINE B2 2 212 -4 9 962 279 0 0 0 chrX 49498644 49498675 -117151621 + (CA)n Simple_repeat Simple_repeat 1 31 0 9 962 291 257 81 0 chrX 49499100 49499174 -117151122 + ID4 SINE ID 3 82 -1 9 962 723 147 137 15 chrX 49499180 49499311 -117150985 + B1_Mus1 SINE Alu 2 148 0 9 962 191 103 26 0 chrX 49499313 49499352 -117150944 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 9 962 412 251 257 23 chrX 49499361 49499532 -117150764 + B3 SINE B2 1 211 -5 9 962 1302 27 14 0 chrX 49499539 49499687 -117150609 + B1_Mur4 SINE Alu 1 150 0 9 962 1059 97 22 0 chrX 49499759 49499893 -117150403 + B1_Mus1 SINE Alu 2 138 -10 9 962 282 29 0 0 chrX 49499893 49499928 -117150368 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 9 962 277 267 0 0 chrX 49499940 49500000 -117150296 + RSINE1 SINE B4 3 62 -103 9 962 219 298 10 60 chrX 49500004 49500104 -117150192 + RSINE1 SINE B4 67 161 -4 1 962 297 366 53 58 chrX 49500467 49500673 -117149623 + L4 LINE RTE 1616 1820 -209 2 962 350 325 0 82 chrX 49501379 49501513 -117148783 + B1F SINE Alu 1 123 -26 3 962 22 0 0 0 chrX 49501513 49501535 -117148761 + AT_rich Low_complexity Low_complexity 1 22 0 4 962 1094 92 0 0 chrX 49501671 49501812 -117148484 + B1_Mus2 SINE Alu 1 141 -6 5 962 279 0 0 0 chrX 49501814 49501845 -117148451 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 6 962 354 45 0 0 chrX 49502613 49502657 -117147639 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 962 297 152 0 0 chrX 49503054 49503100 -117147196 + ID_B1 SINE B4 81 126 -98 8 962 1044 85 50 0 chrX 49503281 49503422 -117146874 - B1_Mus1 SINE Alu 0 148 1 9 962 384 139 0 0 chrX 49503450 49503529 -117146767 + (TC)n Simple_repeat Simple_repeat 2 80 0 1 962 1575 38 16 0 chrX 49503532 49503718 -117146578 - B2_Mm1a SINE B2 -4 189 1 1 962 487 273 22 15 chrX 49505737 49505871 -117144425 - RSINE1 SINE B4 -29 136 2 1 962 187 295 0 37 chrX 49505871 49505952 -117144344 - L2 LINE L2 -565 2854 2777 1 962 432 67 0 0 chrX 49506699 49506759 -117143537 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 962 655 310 63 46 chrX 49507435 49507783 -117142513 - MLT1A0 LTR MaLR -11 354 1 1 962 256 263 0 0 chrX 49508363 49508420 -117141876 - ID4 SINE ID -12 71 15 1 962 1428 80 5 0 chrX 49508458 49508645 -117141651 + B2_Mm1a SINE B2 1 188 -5 1 962 271 296 17 42 chrX 49508649 49508769 -117141527 + PB1D10 SINE Alu 1 117 0 1 962 508 267 57 28 chrX 49509007 49509184 -117141112 + B3A SINE B2 16 197 -1 1 962 436 206 53 38 chrX 49510228 49510359 -117139937 + B1F1 SINE Alu 16 148 -1 2 962 349 242 0 0 chrX 49510859 49510925 -117139371 - tRNA-Ala-GCY_ tRNA tRNA -9 66 1 2 962 180 0 0 0 chrX 49510944 49510964 -117139332 + (T)n Simple_repeat Simple_repeat 1 20 0 2 962 354 247 0 0 chrX 49510969 49511042 -117139254 - CR1_Mam LINE CR1 -998 1206 1134 2 962 1197 210 52 88 chrX 49511107 49511514 -117138782 - CR1_Mam LINE CR1 -1622 582 191 2 962 404 284 63 0 chrX 49511925 49512052 -117138244 + RSINE1 SINE B4 14 148 -17 2 962 222 208 0 17 chrX 49512861 49512921 -117137375 + MIRc SINE MIR 42 97 -171 2 962 689 170 208 38 chrX 49512945 49513128 -117137168 - B3 SINE B2 -2 214 1 2 962 896 175 0 20 chrX 49513718 49513864 -117136432 + B1_Mur2 SINE Alu 1 143 -6 2 962 733 169 312 0 chrX 49514298 49514458 -117135838 + B3 SINE B2 1 210 -6 2 962 21 0 0 0 chrX 49514481 49514502 -117135794 + AT_rich Low_complexity Low_complexity 1 21 0 2 962 282 273 0 29 chrX 49514558 49514626 -117135670 - tRNA-Ala-GCY_ tRNA tRNA -8 67 2 3 962 290 250 0 16 chrX 49515047 49515108 -117135188 + ID4_ SINE ID 10 69 -14 3 962 287 0 0 50 chrX 49518094 49518134 -117132162 + (GGA)n Simple_repeat Simple_repeat 3 40 0 3 962 207 0 0 0 chrX 49520012 49520035 -117130261 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 3 962 637 171 30 37 chrX 49520035 49520169 -117130127 - B1_Mus2 SINE Alu -14 133 1 3 962 287 245 17 109 chrX 49520070 49520189 -117130107 - MT2B LTR ERVL -343 258 151 3 962 518 272 59 0 chrX 49520408 49520544 -117129752 + ID_B1 SINE B4 81 224 0 3 962 843 261 78 91 chrX 49521043 49521108 -117129188 - L1MB5 LINE L1 -1 6179 6128 3 962 490 229 88 204 chrX 49521108 49521219 -117129077 + B4 SINE B4 2 99 -193 3 962 630 144 93 50 chrX 49521219 49521358 -117128938 + B1_Mur3 SINE Alu 5 149 0 3 962 490 229 88 204 chrX 49521358 49521575 -117128721 + B4 SINE B4 100 292 0 3 962 1087 261 78 91 chrX 49521575 49521918 -117128378 - L1MB5 LINE L1 -46 6128 5776 3 962 180 0 0 0 chrX 49522043 49522063 -117128233 + (TC)n Simple_repeat Simple_repeat 1 20 0 4 962 279 0 0 0 chrX 49522063 49522093 -117128203 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 962 375 23 0 0 chrX 49522220 49522264 -117128032 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 962 402 191 0 0 chrX 49522309 49522372 -117127924 - Lx9 LINE L1 -432 7212 7150 4 962 198 376 9 56 chrX 49522381 49522488 -117127808 - MIRc SINE MIR -127 141 40 4 962 2248 111 9 3 chrX 49522701 49523026 -117127270 - ORR1A2 LTR MaLR 0 327 1 4 962 4672 29 0 0 chrX 49523227 49523772 -117126524 + L1_Mm LINE L1 4284 4828 -1055 4 962 1452 70 43 0 chrX 49523911 49524097 -117126199 + B2_Mm2 SINE B2 2 195 0 4 962 636 236 128 32 chrX 49524282 49524470 -117125826 + ID_B1 SINE B4 2 207 -17 4 962 25 0 0 0 chrX 49524698 49524723 -117125573 + AT_rich Low_complexity Low_complexity 1 25 0 4 962 752 243 71 33 chrX 49524731 49524914 -117125382 + ID_B1 SINE B4 1 190 -34 5 962 220 220 0 0 chrX 49525947 49525997 -117124299 + T-rich Low_complexity Low_complexity 1 50 0 5 962 1457 64 27 0 chrX 49525999 49526187 -117124109 - B2_Mm1a SINE B2 0 193 1 5 962 287 208 19 0 chrX 49526225 49526278 -117124018 - B1_Mus1 SINE Alu -93 55 2 5 962 235 231 0 19 chrX 49526304 49526357 -117123939 + ZP3AR Satellite Satellite 37 88 -124 5 962 731 98 24 0 chrX 49526310 49526433 -117123863 + BC1_Mm scRNA scRNA 1 126 -26 5 962 798 308 5 5 chrX 49526440 49526662 -117123634 + ID_B1 SINE B4 2 223 -1 5 962 795 163 7 28 chrX 49526720 49526865 -117123431 - B1_Mur3 SINE Alu -7 142 1 5 962 296 233 53 27 chrX 49527034 49527109 -117123187 - ID4 SINE ID 0 83 7 5 962 419 180 65 65 chrX 49527138 49527245 -117123051 - PB1D10 SINE Alu -9 108 2 5 962 494 256 85 0 chrX 49527339 49527468 -117122828 + L1ME3 LINE L1 6016 6155 -7 6 962 808 97 45 0 chrX 49527562 49527701 -117122595 + B1_Mus1 SINE Alu 2 150 0 6 962 271 275 0 70 chrX 49527782 49527911 -117122385 + (TATATG)n Simple_repeat Simple_repeat 3 122 0 6 962 480 214 0 51 chrX 49528288 49528406 -117121890 + ID_B1 SINE B4 106 217 -7 6 962 446 267 28 9 chrX 49528493 49528599 -117121697 + B1F SINE Alu 2 109 -40 6 962 465 186 41 0 chrX 49528635 49528732 -117121564 - RMER15 LTR ERVL 0 575 475 6 962 1969 178 111 107 chrX 49528732 49528876 -117121420 - RMER15 LTR ERVL -32 543 445 6 962 1242 27 0 13 chrX 49528876 49529025 -117121271 - B1_Mus2 SINE Alu 0 147 1 6 962 1969 178 111 107 chrX 49529025 49529421 -117120875 - RMER15 LTR ERVL -131 444 1 6 962 372 340 0 0 chrX 49529475 49529575 -117120721 + RMER15 LTR ERVL 367 466 -109 6 962 1752 80 8 4 chrX 49529647 49529887 -117120409 + L1_Mus2 LINE L1 6325 6565 -1 6 962 23 68 0 0 chrX 49530040 49530084 -117120212 + AT_rich Low_complexity Low_complexity 1 44 0 7 962 389 304 40 0 chrX 49530144 49530269 -117120027 - ID_B1 SINE B4 -11 213 84 7 962 369 0 0 0 chrX 49530613 49530654 -117119642 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 962 441 0 0 0 chrX 49530654 49530702 -117119594 + (GA)n Simple_repeat Simple_repeat 1 49 0 7 962 32 26 0 0 chrX 49530894 49530933 -117119363 + AT_rich Low_complexity Low_complexity 1 39 0 7 962 397 278 142 8 chrX 49530994 49531128 -117119168 - RSINE1 SINE B4 -13 152 1 7 962 304 230 177 0 chrX 49531128 49531241 -117119055 - Tigger7 DNA MER2_type -236 2255 2123 7 962 592 311 22 0 chrX 49531262 49531442 -117118854 + MER44B DNA MER2_type 123 306 -244 7 962 246 156 0 0 chrX 49531489 49531553 -117118743 + (TTTG)n Simple_repeat Simple_repeat 1 64 0 7 962 1061 47 0 164 chrX 49531554 49531731 -117118565 - B1_Mus1 SINE Alu 0 148 1 7 962 325 267 23 0 chrX 49531733 49531819 -117118477 - Tigger7 DNA MER2_type -2403 88 1 7 962 272 243 81 0 chrX 49531885 49531959 -117118337 - L1M4 LINE L1 -447 5727 5648 8 962 758 288 14 18 chrX 49532255 49532478 -117117818 - ID_B1 SINE B4 0 224 3 8 962 224 186 47 0 chrX 49532685 49532728 -117117568 + ID4_ SINE ID 35 79 -4 8 962 431 202 102 58 chrX 49533561 49533700 -117116596 + B1F SINE Alu 1 141 -8 8 962 441 260 232 0 chrX 49533709 49533890 -117116406 + ID_B1 SINE B4 1 223 -1 8 962 389 243 106 18 chrX 49534233 49534346 -117115950 - RMER30 DNA MER1_type -1 201 79 8 962 280 318 55 16 chrX 49535458 49535586 -117114710 + MIRb SINE MIR 43 175 -93 8 962 486 256 14 36 chrX 49535638 49535776 -117114520 + B1F SINE Alu 14 148 -1 8 962 451 312 62 7 chrX 49536223 49536368 -117113928 + ID_B1 SINE B4 1 153 -71 8 962 428 141 0 23 chrX 49536383 49536401 -117113895 + G-rich Low_complexity Low_complexity 4 21 0 8 962 1317 78 0 0 chrX 49536401 49536580 -117113716 + (GGGGA)n Simple_repeat Simple_repeat 1 179 0 9 962 428 141 0 23 chrX 49536580 49536648 -117113648 + G-rich Low_complexity Low_complexity 22 87 0 9 962 264 311 0 0 chrX 49536643 49536765 -117113531 + GA-rich Low_complexity Low_complexity 1 122 0 9 962 414 0 0 0 chrX 49537681 49537727 -117112569 + (CCA)n Simple_repeat Simple_repeat 3 48 0 9 962 593 259 12 58 chrX 49537866 49538038 -117112258 - RSINE1 SINE B4 0 165 2 9 962 481 269 0 102 chrX 49538327 49538484 -117111812 - RSINE1 SINE B4 0 165 25 9 962 199 255 0 19 chrX 49538562 49538614 -117111682 + L3 LINE CR1 4249 4299 -190 9 962 299 256 19 40 chrX 49538827 49538938 -117111358 - B1_Mur1 SINE Alu -2 147 1 9 962 783 212 14 98 chrX 49539604 49539672 -117110624 + ID SINE ID 1 68 -156 9 962 2168 103 20 62 chrX 49539672 49539730 -117110566 - ORR1A2 LTR MaLR 0 327 263 9 962 236 30 30 0 chrX 49539730 49539763 -117110533 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 962 2168 103 20 62 chrX 49539763 49540045 -117110251 - ORR1A2 LTR MaLR -65 262 2 9 962 783 212 14 98 chrX 49540045 49540190 -117110106 + ID_B1 SINE B4 69 196 -28 9 962 570 236 16 0 chrX 49540634 49540761 -117109535 - B1F SINE Alu 0 149 21 1 962 585 105 0 0 chrX 49540816 49540913 -117109383 - B1_Mus2 SINE Alu 0 149 53 1 962 406 267 20 10 chrX 49540994 49541096 -117109200 + RSINE1 SINE B4 24 126 -39 1 962 429 20 0 0 chrX 49541342 49541392 -117108904 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 962 664 253 80 11 chrX 49543215 49543403 -117106893 - ID_B1 SINE B4 -21 203 3 1 962 438 277 0 0 chrX 49543910 49544011 -117106285 + B1F1 SINE Alu 17 117 -32 1 962 186 43 0 0 chrX 49544030 49544053 -117106243 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1 962 1212 47 0 7 chrX 49544053 49544192 -117106104 - B1_Mus1 SINE Alu -9 139 1 1 962 255 269 152 61 chrX 49544200 49544299 -117105997 + B1F1 SINE Alu 11 118 -31 1 962 540 87 15 52 chrX 49544336 49544470 -117105826 + GA-rich Low_complexity Low_complexity 3 131 0 1 962 464 274 0 10 chrX 49544604 49544707 -117105589 + ID_B1 SINE B4 109 210 -14 1 962 349 257 178 32 chrX 49544709 49544894 -117105402 + Lx8 LINE L1 7261 7472 -1 1 962 666 0 0 0 chrX 49544927 49545001 -117105295 + (GAAA)n Simple_repeat Simple_repeat 1 74 0 1 963 522 0 0 0 chrX 49545348 49545406 -117104890 + (GGA)n Simple_repeat Simple_repeat 3 60 0 1 963 200 375 14 20 chrX 49546147 49546294 -117104002 + MIR3 SINE MIR 2 147 -61 1 963 261 291 47 95 chrX 49546360 49546395 -117103901 + MIRb SINE MIR 66 102 -166 1 963 201 121 0 0 chrX 49546395 49546428 -117103868 + (CGA)n Simple_repeat Simple_repeat 2 34 0 1 963 261 291 47 95 chrX 49546428 49546582 -117103714 + MIRb SINE MIR 103 246 -22 1 963 432 0 0 0 chrX 49546696 49546744 -117103552 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 963 431 274 0 10 chrX 49548056 49548159 -117102137 - PB1 SINE Alu -2 125 24 1 963 677 144 0 48 chrX 49548250 49548321 -117101975 - B1_Mus2 SINE Alu -6 141 73 1 963 3510 25 2 0 chrX 49548321 49548716 -117101580 - MTA_Mm LTR MaLR 0 396 1 1 963 677 144 0 48 chrX 49548716 49548768 -117101528 - B1_Mus2 SINE Alu -75 72 24 1 963 242 301 13 38 chrX 49549416 49549563 -117100733 - MIRb SINE MIR -75 193 46 1 963 189 0 0 0 chrX 49549567 49549588 -117100708 + (T)n Simple_repeat Simple_repeat 1 21 0 1 963 1250 48 0 0 chrX 49549588 49549735 -117100561 - B1_Mus1 SINE Alu 0 148 2 1 963 255 222 0 0 chrX 49550066 49550111 -117100185 - B1F1 SINE Alu -100 49 5 1 963 288 0 0 0 chrX 49550186 49550218 -117100078 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 963 295 232 0 0 chrX 49550221 49550277 -117100019 - tRNA-Ala-GCA tRNA tRNA -13 62 7 1 963 283 275 0 80 chrX 49550277 49550295 -117100001 - ID4 SINE ID -14 68 1 1 963 885 245 10 15 chrX 49550443 49550642 -117099654 + B3 SINE B2 8 205 -11 1 963 198 136 0 0 chrX 49550724 49550768 -117099528 + (T)n Simple_repeat Simple_repeat 1 44 0 1 963 282 261 0 0 chrX 49550793 49550858 -117099438 + ID_B1 SINE B4 98 162 -62 1 963 241 247 48 24 chrX 49551078 49551161 -117099135 + LTR48 LTR ERV1 72 156 -631 1 963 234 167 16 32 chrX 49551558 49551620 -117098676 + MER34 LTR ERV1 417 477 -65 1 963 306 50 0 0 chrX 49552006 49552046 -117098250 + (CAA)n Simple_repeat Simple_repeat 3 42 0 1 963 253 353 10 0 chrX 49552049 49552151 -117098145 - PB1D10 SINE Alu -14 103 1 1 963 266 319 67 42 chrX 49552425 49552618 -117097678 - MIRb SINE MIR -68 200 3 1 963 540 216 31 15 chrX 49552907 49553059 -117097237 - MER5A1 DNA MER1_type -4 162 5 1 963 212 234 46 15 chrX 49553517 49553582 -117096714 - BC1_Mm scRNA scRNA -65 87 21 1 963 792 196 73 37 chrX 49553696 49553887 -117096409 - ID_B1 SINE B4 -26 198 1 1 963 1647 155 59 10 chrX 49554083 49554389 -117095907 - ORR1A4 LTR MaLR -8 321 1 1 963 658 200 28 14 chrX 49554999 49555141 -117095155 + B1_Mur2 SINE Alu 2 145 -4 1 963 995 140 0 11 chrX 49555177 49555358 -117094938 + GA-rich Low_complexity Low_complexity 1 179 0 1 963 254 249 1 83 chrX 49555582 49555663 -117094633 + RSINE1 SINE B4 3 78 -214 1 963 210 128 0 0 chrX 49555823 49555862 -117094434 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 1 963 983 49 2 16 chrX 49555874 49556023 -117094273 - B1_Mm SINE Alu 0 149 1 1 963 1252 48 120 0 chrX 49556031 49556198 -117094098 - B2_Mm1t SINE B2 -6 187 1 1 963 866 153 10 102 chrX 49556201 49556398 -117093898 - RMER1B Other Other -7 1059 881 1 963 526 247 253 0 chrX 49556402 49556556 -117093740 + RMER1A Other Other 93 285 -745 1 963 335 255 17 86 chrX 49556574 49556690 -117093606 - PB1D9 SINE Alu -1 119 12 1 963 266 73 0 24 chrX 49556751 49556793 -117093503 + (CTG)n Simple_repeat Simple_repeat 1 41 0 1 963 834 165 0 14 chrX 49556793 49556928 -117093368 - B1_Mus2 SINE Alu -8 139 5 1 963 441 239 12 6 chrX 49557503 49557663 -117092633 + (TA)n Simple_repeat Simple_repeat 1 161 0 1 963 272 220 0 17 chrX 49557694 49557754 -117092542 - L1MEa LINE L1 -4596 1504 1446 1 963 203 339 0 0 chrX 49557758 49557814 -117092482 + polypyrimidine Low_complexity Low_complexity 3 58 0 1 963 844 227 191 56 chrX 49557814 49558155 -117092141 - MTB LTR MaLR 0 400 14 1 963 1922 80 62 16 chrX 49558234 49558539 -117091757 + ORR1A2 LTR MaLR 1 319 -8 1 963 292 167 0 16 chrX 49558556 49558617 -117091679 - ID_B1 SINE B4 -53 171 112 1 963 244 220 20 0 chrX 49558618 49558668 -117091628 - ID4 SINE ID -31 52 2 1 963 594 130 125 39 chrX 49558706 49558834 -117091462 - Lx4A LINE L1 -3 7055 6917 1 963 4332 19 2 0 chrX 49559089 49559570 -117090726 - LTRIS_Mm LTR ERV1 0 482 1 1 963 1365 255 62 29 chrX 49559588 49560037 -117090259 - L1MA6 LINE L1 -448 5852 5389 1 963 480 111 0 0 chrX 49560129 49560201 -117090095 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 1 963 457 316 70 57 chrX 49560235 49560793 -117089503 - L1MEa LINE L1 -5262 808 244 1 963 356 269 19 37 chrX 49561016 49561124 -117089172 - RSINE1 SINE B4 -4 161 56 1 963 425 75 333 36 chrX 49561275 49561386 -117088910 - B2_Mm2 SINE B2 -5 190 47 1 963 1122 96 78 0 chrX 49561439 49561605 -117088691 - B2_Mm1t SINE B2 -14 179 1 1 963 672 241 40 76 chrX 49561628 49561852 -117088444 - ID_B1 SINE B4 -6 218 3 1 963 537 322 19 34 chrX 49561918 49562124 -117088172 + B4A SINE B4 58 260 -32 1 963 383 301 44 9 chrX 49562161 49562275 -117088021 - B1F SINE Alu -30 119 2 1 963 470 122 10 0 chrX 49562285 49562383 -117087913 + (TC)n Simple_repeat Simple_repeat 2 100 0 1 963 189 171 0 0 chrX 49562384 49562419 -117087877 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1 963 351 0 0 0 chrX 49562419 49562458 -117087838 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 1 963 700 232 43 57 chrX 49562458 49562668 -117087628 - B3 SINE B2 -9 207 1 1 963 281 242 15 0 chrX 49562756 49562822 -117087474 - L1ME3A LINE L1 -68 6105 6039 1 963 646 271 30 50 chrX 49562860 49563062 -117087234 + ID_B1 SINE B4 22 219 -5 1 963 1335 116 11 0 chrX 49563070 49563260 -117087036 + B2_Mm1t SINE B2 2 193 0 1 963 228 310 0 0 chrX 49563260 49563318 -117086978 + ID4_ SINE ID 22 79 -4 1 963 1297 83 22 22 chrX 49563910 49564094 -117086202 - B2_Mm1t SINE B2 -9 184 1 1 963 756 174 29 0 chrX 49564426 49564564 -117085732 - B1_Mur2 SINE Alu -7 142 1 1 963 915 126 15 0 chrX 49564742 49564877 -117085419 + B1_Mus1 SINE Alu 2 138 -10 1 963 357 24 0 0 chrX 49564890 49564932 -117085364 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 963 683 296 36 0 chrX 49564935 49565131 -117085165 - ID_B1 SINE B4 -20 204 2 1 963 441 0 0 0 chrX 49565136 49565185 -117085111 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 1 963 515 231 8 17 chrX 49565202 49565321 -117084975 - ID_B1 SINE B4 -23 201 84 1 963 256 0 24 49 chrX 49566036 49566077 -117084219 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 1 963 414 0 0 0 chrX 49566307 49566353 -117083943 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 963 512 242 45 8 chrX 49566995 49567128 -117083168 + B1F SINE Alu 10 147 -2 1 963 256 247 0 141 chrX 49567235 49567320 -117082976 + ID2 SINE ID 1 73 -10 1 963 352 200 0 26 chrX 49567263 49567340 -117082956 + B4A SINE B4 19 93 -199 1 963 528 258 31 50 chrX 49567474 49567633 -117082663 + RSINE1 SINE B4 9 164 -1 1 963 206 167 20 20 chrX 49567751 49567800 -117082496 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 963 325 259 25 82 chrX 49567895 49568017 -117082279 - PB1D10 SINE Alu -2 115 1 1 963 721 283 22 22 chrX 49568017 49568096 -117082200 - ID SINE ID -144 80 2 1 963 719 173 49 35 chrX 49568143 49568287 -117082009 + B1_Mus1 SINE Alu 3 148 0 1 963 225 0 0 0 chrX 49568299 49568324 -117081972 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1 963 531 45 0 0 chrX 49568387 49568453 -117081843 + (TGG)n Simple_repeat Simple_repeat 1 66 0 1 963 471 216 212 22 chrX 49569357 49569494 -117080802 + RSINE1 SINE B4 3 165 0 1 963 28 0 0 0 chrX 49569538 49569566 -117080730 + AT_rich Low_complexity Low_complexity 1 28 0 1 963 296 231 71 81 chrX 49571608 49571707 -117078589 + ID_B1 SINE B4 78 175 -49 1 963 367 260 65 28 chrX 49571626 49571733 -117078563 + PB1D10 SINE Alu 7 117 0 1 963 300 91 0 0 chrX 49571964 49572008 -117078288 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 963 249 33 0 0 chrX 49572008 49572037 -117078259 + (GA)n Simple_repeat Simple_repeat 1 30 0 2 963 596 236 14 41 chrX 49572043 49572189 -117078107 - B3A SINE B2 -55 143 2 2 963 1053 78 42 0 chrX 49572627 49572769 -117077527 + B1_Mus1 SINE Alu 1 148 0 2 963 186 43 0 0 chrX 49572769 49572792 -117077504 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 963 201 39 0 0 chrX 49573243 49573269 -117077027 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2 963 490 196 17 67 chrX 49573459 49573579 -117076717 - ID_B1 SINE B4 -2 222 109 2 963 560 195 144 6 chrX 49573656 49573816 -117076480 + RMER15 LTR ERVL 41 222 -353 2 963 3158 62 15 0 chrX 49573945 49574345 -117075951 - MTB_Mm LTR MaLR -1 406 1 2 963 225 293 0 0 chrX 49574378 49574436 -117075860 - B2_Mm2 SINE B2 -137 58 1 2 963 484 266 186 0 chrX 49574701 49574878 -117075418 - B3 SINE B2 -5 211 2 2 963 818 104 228 49 chrX 49574878 49575040 -117075256 - B2_Mm1t SINE B2 0 193 3 2 963 310 256 37 22 chrX 49575047 49575183 -117075113 - L1M4 LINE L1 -944 5202 5065 2 963 990 148 7 0 chrX 49575241 49575390 -117074906 - B1_Mur4 SINE Alu 0 150 1 2 963 769 269 41 10 chrX 49575422 49575617 -117074679 - ID_B1 SINE B4 -4 220 20 2 963 258 250 0 0 chrX 49575704 49575776 -117074520 + (TA)n Simple_repeat Simple_repeat 2 73 0 2 963 261 286 21 21 chrX 49576170 49576263 -117074033 + MER58C DNA MER1_type 7 99 -116 2 963 247 330 116 0 chrX 49576268 49576380 -117073916 - PB1 SINE Alu -2 125 1 2 963 249 271 71 0 chrX 49576396 49576481 -117073815 + L1M4 LINE L1 5209 5299 -847 2 963 713 268 56 0 chrX 49576514 49576693 -117073603 + ID_B1 SINE B4 36 224 0 2 963 1074 96 0 0 chrX 49576889 49577035 -117073261 + B1_Mus2 SINE Alu 2 147 0 2 963 816 212 0 53 chrX 49577132 49577301 -117072995 + RSINE1 SINE B4 3 162 -3 2 963 261 0 0 0 chrX 49577931 49577960 -117072336 + (T)n Simple_repeat Simple_repeat 1 29 0 2 963 255 238 32 0 chrX 49578074 49578137 -117072159 - ID4 SINE ID -14 69 5 2 963 1072 122 0 0 chrX 49578670 49578818 -117071478 - B1_Mus1 SINE Alu 0 148 1 2 963 975 210 156 33 chrX 49579153 49579429 -117070867 - MTD LTR MaLR 0 419 110 2 963 254 216 149 0 chrX 49579467 49579541 -117070755 + PB1D9 SINE Alu 28 112 -8 2 963 881 237 23 19 chrX 49579554 49579769 -117070527 + B3 SINE B2 1 216 0 2 963 392 250 10 0 chrX 49580033 49580129 -117070167 - MTD LTR MaLR -324 97 1 2 963 465 314 117 48 chrX 49580142 49580504 -117069792 - L1MA4 LINE L1 -1484 5989 5546 2 963 745 218 137 11 chrX 49580504 49580694 -117069602 - B3 SINE B2 0 216 3 2 963 465 313 123 63 chrX 49580694 49580707 -117069589 - L1MA4 LINE L1 -302 5545 5541 2 963 941 251 43 0 chrX 49580707 49580914 -117069382 - B3 SINE B2 0 216 1 2 963 734 300 90 13 chrX 49580914 49581390 -117068906 - L1MA4 LINE L1 -747 5550 5040 2 963 860 131 33 16 chrX 49581392 49581572 -117068724 - B3 SINE B2 -3 192 1 2 963 778 268 26 27 chrX 49581575 49581898 -117068398 - L1MA4 LINE L1 -831 5016 4712 2 963 378 0 0 0 chrX 49581933 49581975 -117068321 + (TC)n Simple_repeat Simple_repeat 2 43 0 2 963 351 0 0 0 chrX 49581975 49582013 -117068283 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 963 533 252 0 39 chrX 49582013 49582141 -117068155 - RSINE1 SINE B4 -41 124 2 2 963 502 214 17 67 chrX 49582148 49582268 -117068028 - PB1D9 SINE Alu -6 114 1 2 963 753 120 25 25 chrX 49582274 49582436 -117067860 + CT-rich Low_complexity Low_complexity 4 165 0 2 963 586 259 31 0 chrX 49582436 49582598 -117067698 - L1MA4 LINE L1 -1391 4752 4586 2 963 540 258 144 6 chrX 49582842 49583002 -117067294 - B3A SINE B2 -16 182 1 2 963 624 140 0 0 chrX 49583012 49583119 -117067177 + (TCTA)n Simple_repeat Simple_repeat 4 110 0 2 963 309 89 0 0 chrX 49583129 49583174 -117067122 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 963 745 162 7 81 chrX 49583174 49583322 -117066974 - B1_Mus2 SINE Alu -10 137 1 2 963 2344 82 12 12 chrX 49583326 49583660 -117066636 - L1Md_F2 LINE L1 0 6582 6249 2 963 267 315 0 33 chrX 49585937 49586029 -117064267 - L5 LINE RTE -213 2052 1964 2 963 502 245 147 6 chrX 49586060 49586216 -117064080 - MER5B DNA MER1_type 0 178 1 2 963 313 287 232 11 chrX 49586223 49586413 -117063883 + MIRb SINE MIR 23 254 -14 2 963 976 128 7 7 chrX 49586530 49586680 -117063616 - B1_Mur4 SINE Alu 0 150 1 2 963 453 66 0 0 chrX 49587091 49587152 -117063144 + (TATG)n Simple_repeat Simple_repeat 2 62 0 2 963 244 263 47 66 chrX 49587160 49587242 -117063054 - PB1 SINE Alu 0 127 46 2 963 714 290 76 98 chrX 49587242 49587609 -117062687 - ORR1E LTR MaLR 0 359 1 2 963 244 263 47 66 chrX 49587609 49587632 -117062664 - PB1 SINE Alu -82 45 24 2 963 653 257 29 5 chrX 49587857 49588036 -117062260 + B3 SINE B2 18 197 -1 2 963 972 108 0 0 chrX 49588062 49588210 -117062086 + (TG)n Simple_repeat Simple_repeat 2 149 0 2 963 440 293 75 0 chrX 49588221 49588354 -117061942 - RSINE1 SINE B4 -21 144 2 2 963 549 75 0 0 chrX 49589154 49589234 -117061062 - B1_Mur4 SINE Alu -1 149 70 2 963 2494 136 2 5 chrX 49589307 49589707 -117060589 + RMER15 LTR ERVL 177 575 0 2 963 276 271 83 25 chrX 49589722 49589843 -117060453 + MIRm SINE MIR 36 163 -113 2 963 753 93 0 0 chrX 49589850 49589957 -117060339 + (TTCC)n Simple_repeat Simple_repeat 1 107 0 2 963 690 273 86 0 chrX 49589965 49590163 -117060133 - ID_B1 SINE B4 -9 215 1 2 963 252 86 0 0 chrX 49590227 49590262 -117060034 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2 963 181 75 0 48 chrX 49590525 49590567 -117059729 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 2 963 1083 37 81 0 chrX 49590572 49590708 -117059588 - B1_Mm SINE Alu 0 147 1 2 963 477 0 0 0 chrX 49591625 49591678 -117058618 + (GGA)n Simple_repeat Simple_repeat 3 55 0 2 963 888 248 5 32 chrX 49591774 49591991 -117058305 + B3 SINE B2 5 215 -1 2 963 548 294 109 0 chrX 49592013 49592197 -117058099 + Lx8 LINE L1 7148 7351 -122 2 963 302 216 85 59 chrX 49592259 49592377 -117057919 + Lx8 LINE L1 7353 7473 0 2 963 227 280 9 123 chrX 49592284 49592390 -117057906 + RMER1C Other Other 1244 1337 -5 2 963 4024 209 121 27 chrX 49592389 49593355 -117056941 + Lx7 LINE L1 6640 7696 0 2 963 450 250 235 12 chrX 49593369 49593535 -117056761 + ID_B1 SINE B4 21 223 -1 2 963 355 244 7 56 chrX 49593553 49593696 -117056600 + L1ME2z LINE L1 6143 6278 -166 2 963 1198 121 0 11 chrX 49593697 49593873 -117056423 + B2_Mm2 SINE B2 4 177 -18 2 963 1151 75 0 0 chrX 49593885 49594032 -117056264 - B1_Mus2 SINE Alu 0 147 1 2 963 213 188 42 0 chrX 49594959 49595007 -117055289 + CT-rich Low_complexity Low_complexity 3 52 0 2 963 501 277 169 0 chrX 49595034 49595211 -117055085 - ID_B1 SINE B4 -17 207 1 2 963 315 71 0 0 chrX 49595277 49595319 -117054977 + (TCC)n Simple_repeat Simple_repeat 2 43 0 2 963 183 129 0 0 chrX 49595752 49595783 -117054513 + (GAAA)n Simple_repeat Simple_repeat 1 31 0 2 963 453 300 5 101 chrX 49596007 49596196 -117054100 - B4A SINE B4 -113 179 9 2 963 1631 151 13 141 chrX 49596309 49596686 -117053610 - ORR1A4 LTR MaLR 0 329 1 2 963 353 299 86 36 chrX 49597092 49597428 -117052868 - L2 LINE L2 -963 2456 2104 2 963 2475 222 35 39 chrX 49597430 49598053 -117052243 + L1MB5 LINE L1 5350 5970 -204 2 963 669 317 6 0 chrX 49598053 49598214 -117052082 + ID_B1 SINE B4 29 190 -34 2 963 511 214 0 74 chrX 49598110 49598231 -117052065 + PB1D10 SINE Alu 6 117 0 2 963 375 295 24 24 chrX 49598233 49598403 -117051893 + GA-rich Low_complexity Low_complexity 5 174 0 2 963 203 152 0 61 chrX 49598472 49598496 -117051800 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 2 963 252 0 0 0 chrX 49598496 49598524 -117051772 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 2 963 203 152 0 61 chrX 49598524 49598548 -117051748 + (CAAAC)n Simple_repeat Simple_repeat 1 21 0 2 963 207 0 0 0 chrX 49599926 49599949 -117050347 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 2 963 231 189 37 19 chrX 49599968 49599988 -117050308 + MT2B LTR ERVL 238 258 -343 2 963 834 168 14 7 chrX 49599988 49600132 -117050164 + B1_Mur1 SINE Alu 3 147 -2 2 963 214 245 19 0 chrX 49600427 49600480 -117049816 + BC1_Mm scRNA scRNA 32 85 -67 2 963 210 37 0 0 chrX 49600527 49600554 -117049742 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2 963 1018 249 0 0 chrX 49600605 49600802 -117049494 - ID_B1 SINE B4 -15 209 13 2 963 362 226 704 0 chrX 49602384 49602499 -117047797 + RMER30 DNA MER1_type 7 202 0 2 963 410 282 52 103 chrX 49602602 49602776 -117047520 - MER5B DNA MER1_type -6 172 8 2 963 549 76 0 0 chrX 49602788 49602867 -117047429 + (GGGA)n Simple_repeat Simple_repeat 3 81 0 2 963 320 250 0 14 chrX 49602887 49602960 -117047336 + ID4 SINE ID 2 73 -10 2 963 522 305 58 92 chrX 49603592 49604025 -117046271 - MLT1D LTR MaLR -52 453 36 2 963 2400 113 114 5 chrX 49604046 49604555 -117045741 + RMER6A LTR ERVK 1 591 -165 2 963 3139 103 19 83 chrX 49604555 49604711 -117045585 - L1_Mur1 LINE L1 -653 5233 5117 2 963 1123 76 0 0 chrX 49604711 49604855 -117045441 - B1_Mus1 SINE Alu 0 148 5 2 963 3139 103 19 83 chrX 49604855 49605239 -117045057 - L1_Mur1 LINE L1 -770 5116 4728 2 963 3514 63 5 5 chrX 49605239 49605688 -117044608 - L1_Mus3 LINE L1 -6 6632 6184 2 963 3753 123 40 3 chrX 49605688 49606293 -117044003 + Lx3B LINE L1 6347 6973 0 2 963 1142 123 6 0 chrX 49606315 49606494 -117043802 + RMER6A LTR ERVK 577 756 0 2 963 396 267 34 86 chrX 49606883 49607035 -117043261 - B3A SINE B2 -2 193 50 2 963 444 314 88 6 chrX 49607242 49607402 -117042894 + B4A SINE B4 102 274 -18 3 963 705 24 0 0 chrX 49607433 49607516 -117042780 + (CA)n Simple_repeat Simple_repeat 1 83 0 3 963 1002 65 0 14 chrX 49607571 49607712 -117042584 - B1_Mus1 SINE Alu 0 148 10 3 963 507 213 38 113 chrX 49607573 49607732 -117042564 - B4 SINE B4 -69 223 77 3 963 462 303 122 41 chrX 49607734 49608050 -117042246 - L1MB2 LINE L1 -12 6159 5817 3 963 360 0 0 0 chrX 49608091 49608131 -117042165 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 963 835 279 48 56 chrX 49608132 49608177 -117042119 - B4A SINE B4 -23 269 232 3 963 752 204 0 0 chrX 49608177 49608319 -117041977 - B1_Mus2 SINE Alu -5 142 1 3 963 835 279 48 56 chrX 49608319 49608543 -117041753 - B4A SINE B4 -61 231 2 3 963 1006 287 50 15 chrX 49608544 49608884 -117041412 - L1MB2 LINE L1 -455 5725 5374 3 963 307 300 44 26 chrX 49608888 49609001 -117041295 - PB1D10 SINE Alu 0 117 3 3 963 22 0 0 0 chrX 49609093 49609115 -117041181 + AT_rich Low_complexity Low_complexity 1 22 0 3 963 1233 48 0 0 chrX 49609115 49609260 -117041036 - B1_Mm SINE Alu -1 146 2 3 963 278 227 169 7 chrX 49609295 49609437 -117040859 - L1MB2 LINE L1 -813 5333 5169 3 963 499 287 92 58 chrX 49609437 49609644 -117040652 - B3A SINE B2 -1 215 2 3 963 901 282 54 75 chrX 49609673 49610232 -117040064 - L1MB2 LINE L1 -1010 5136 4590 3 963 425 285 61 12 chrX 49610365 49610610 -117039686 + MER33 DNA MER1_type 1 257 -67 3 963 492 268 0 0 chrX 49610641 49610753 -117039543 - PB1D9 SINE Alu -7 113 2 3 963 1526 248 67 17 chrX 49610856 49611332 -117038964 - RMER5 LTR ERV1 -34 500 1 3 963 4702 201 21 6 chrX 49611372 49612258 -117038038 - Lx5 LINE L1 -7 7043 6144 3 963 795 362 62 55 chrX 49612356 49612870 -117037426 - MLT1F2 LTR MaLR 0 560 43 3 963 415 268 42 3 chrX 49612922 49613043 -117037253 - B1F SINE Alu -5 144 20 3 963 1223 83 0 16 chrX 49613125 49613308 -117036988 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 3 963 533 168 0 61 chrX 49613340 49613454 -117036842 + B3 SINE B2 1 107 -109 3 963 296 227 53 66 chrX 49613829 49613980 -117036316 - Lx7 LINE L1 0 7696 7548 3 963 500 234 161 0 chrX 49615605 49615742 -117034554 + ID_B1 SINE B4 3 161 -63 3 963 3296 134 34 4 chrX 49616000 49616532 -117033764 - Lx4B LINE L1 -414 6644 6097 3 963 1284 147 88 38 chrX 49616535 49616796 -117033500 + Lx4B LINE L1 6766 7039 -19 3 963 225 0 0 0 chrX 49616796 49616821 -117033475 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 3 963 216 0 0 0 chrX 49616986 49617010 -117033286 + (T)n Simple_repeat Simple_repeat 1 24 0 3 963 1138 75 0 0 chrX 49617010 49617156 -117033140 - B1_Mus2 SINE Alu 0 147 2 3 963 369 43 0 0 chrX 49618265 49618312 -117031984 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 963 326 188 40 50 chrX 49619127 49619228 -117031068 + MIRc SINE MIR 51 150 -118 3 963 1139 194 9 5 chrX 49619388 49619600 -117030696 + B3 SINE B2 1 213 -3 3 963 947 250 13 22 chrX 49619620 49619845 -117030451 + ID_B1 SINE B4 1 223 -1 3 963 26 0 0 0 chrX 49620632 49620658 -117029638 + AT_rich Low_complexity Low_complexity 1 26 0 3 963 212 361 0 14 chrX 49620673 49620746 -117029550 - ID4_ SINE ID -4 79 8 3 963 225 0 0 0 chrX 49620918 49620943 -117029353 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 963 522 31 0 0 chrX 49620943 49621006 -117029290 + (GA)n Simple_repeat Simple_repeat 2 65 0 3 963 385 265 0 0 chrX 49621008 49621091 -117029205 - RSINE1 SINE B4 -40 125 43 3 963 318 216 27 0 chrX 49621744 49621818 -117028478 - RSINE1 SINE B4 -88 77 2 3 963 739 319 50 66 chrX 49621860 49622300 -117027996 - MARNA DNA Mariner -17 569 137 3 963 189 0 0 0 chrX 49622312 49622333 -117027963 + (CTA)n Simple_repeat Simple_repeat 3 23 0 3 963 384 248 23 7 chrX 49622481 49622585 -117027711 + B1_Mur4 SINE Alu 12 113 -7 3 963 613 241 119 12 chrX 49622717 49622885 -117027411 + ID_B1 SINE B4 1 186 -38 3 963 346 257 34 68 chrX 49622793 49622910 -117027386 + B1F SINE Alu 15 127 -22 3 963 278 203 26 39 chrX 49623403 49623480 -117026816 + ID4 SINE ID 2 77 -6 3 963 871 267 85 30 chrX 49624946 49625025 -117025271 - B4 SINE B4 -2 290 208 3 963 222 37 0 0 chrX 49625025 49625052 -117025244 + (TC)n Simple_repeat Simple_repeat 2 28 0 3 963 871 267 85 30 chrX 49625052 49625242 -117025054 - B4 SINE B4 -85 207 6 3 963 180 97 0 0 chrX 49625447 49625478 -117024818 + (TTTTTG)n Simple_repeat Simple_repeat 1 31 0 3 963 207 0 0 0 chrX 49625557 49625580 -117024716 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 963 246 105 0 0 chrX 49625858 49625896 -117024400 + (A)n Simple_repeat Simple_repeat 1 38 0 3 963 483 275 0 75 chrX 49626770 49626931 -117023365 + RMER30 DNA MER1_type 26 174 -28 3 963 22 35 0 0 chrX 49627817 49627846 -117022450 + AT_rich Low_complexity Low_complexity 1 29 0 3 963 279 0 0 0 chrX 49628097 49628128 -117022168 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 3 963 579 29 0 0 chrX 49628606 49628675 -117021621 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 3 963 279 0 0 0 chrX 49628675 49628706 -117021590 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 963 225 277 129 24 chrX 49628732 49628817 -117021479 - RSINE1 SINE B4 -39 126 33 3 963 354 295 82 0 chrX 49628889 49629011 -117021285 - MIRb SINE MIR -19 249 118 3 963 819 230 75 5 chrX 49629144 49629179 -117021117 - B3 SINE B2 0 216 181 3 963 333 118 0 0 chrX 49629179 49629230 -117021066 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 963 819 230 75 5 chrX 49629230 49629395 -117020901 - B3 SINE B2 -36 180 3 3 963 252 0 0 0 chrX 49629467 49629495 -117020801 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 3 963 231 321 142 0 chrX 49631101 49631235 -117019061 + MIR3 SINE MIR 33 185 -23 3 963 803 156 8 0 chrX 49631790 49631918 -117018378 + B3 SINE B2 2 130 -86 3 963 590 245 99 0 chrX 49631970 49632036 -117018260 + ID SINE ID 1 81 -143 3 963 451 246 55 0 chrX 49632036 49632146 -117018150 + PB1D10 SINE Alu 1 116 -1 3 963 627 288 12 12 chrX 49633081 49633243 -117017053 + B3A SINE B2 1 162 -36 3 963 434 18 18 0 chrX 49633292 49633347 -117016949 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 963 397 294 18 9 chrX 49637271 49637381 -117012915 - PB1D7 SINE Alu -7 113 3 3 963 1126 65 0 0 chrX 49637428 49637566 -117012730 - B1_Mus1 SINE Alu -10 138 1 3 963 285 276 11 39 chrX 49637572 49637676 -117012620 - ID4 SINE ID -50 102 2 3 963 220 267 0 16 chrX 49637851 49637912 -117012384 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 963 285 118 0 0 chrX 49638187 49638238 -117012058 + (T)n Simple_repeat Simple_repeat 1 51 0 3 963 277 271 92 41 chrX 49638471 49638667 -117011629 - L1MC LINE L1 -2057 5825 5620 3 963 276 348 8 87 chrX 49638880 49639006 -117011290 + PB1D10 SINE Alu 1 116 -1 3 963 207 0 0 0 chrX 49639008 49639031 -117011265 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 963 315 0 0 0 chrX 49640002 49640037 -117010259 + (CAGG)n Simple_repeat Simple_repeat 1 35 0 3 963 348 214 89 30 chrX 49640928 49641029 -117009267 - PB1D10 SINE Alu -9 108 2 3 963 339 217 48 0 chrX 49641621 49641704 -117008592 + L1MA7 LINE L1 6205 6291 0 3 963 309 326 64 21 chrX 49643140 49643281 -117007015 + B1_Mur2 SINE Alu 3 149 0 3 963 180 317 87 31 chrX 49643576 49643703 -117006593 + MIRb SINE MIR 75 208 -60 3 963 579 29 0 0 chrX 49643942 49644011 -117006285 + (TC)n Simple_repeat Simple_repeat 2 70 0 3 963 258 32 0 0 chrX 49644011 49644041 -117006255 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 963 1254 7 0 0 chrX 49644085 49644228 -117006068 + (TTTCC)n Simple_repeat Simple_repeat 3 145 0 3 963 656 265 0 0 chrX 49644239 49644386 -117005910 - B1_Mur1 SINE Alu 0 149 3 3 963 572 298 25 30 chrX 49645287 49645484 -117004812 - B3A SINE B2 0 198 3 3 963 229 318 101 11 chrX 49645574 49645663 -117004633 + PB1D7 SINE Alu 2 98 -22 3 963 457 298 0 9 chrX 49645583 49645698 -117004598 + ID_B1 SINE B4 98 211 -13 3 963 24 0 0 0 chrX 49647117 49647141 -117003155 + AT_rich Low_complexity Low_complexity 1 24 0 3 963 687 231 122 10 chrX 49647143 49647340 -117002956 - ID_B1 SINE B4 -4 220 2 3 963 458 243 29 0 chrX 49647682 49647785 -117002511 + ID_B1 SINE B4 40 145 -79 3 963 1446 184 19 19 chrX 49647877 49648143 -117002153 + Lx9 LINE L1 7176 7441 -203 3 963 3248 138 61 11 chrX 49648447 49649002 -117001294 + RMER4B LTR ERVK 3 585 0 3 963 1656 27 5 0 chrX 49649034 49649222 -117001074 + B2_Mm1t SINE B2 1 189 -4 3 963 370 248 34 50 chrX 49649263 49649382 -117000914 - B4A SINE B4 -174 118 2 3 963 298 234 56 9 chrX 49651112 49651220 -116999076 + L1M4 LINE L1 2681 2793 -3353 3 963 371 282 0 0 chrX 49651348 49651451 -116998845 + BC1_Mm scRNA scRNA 2 104 -48 3 963 594 280 71 12 chrX 49651476 49651729 -116998567 + L1M4 LINE L1 2804 3071 -3075 3 963 196 385 82 0 chrX 49652636 49652758 -116997538 + MIR SINE MIR 129 260 -2 3 963 537 200 60 104 chrX 49652758 49652823 -116997473 + RSINE1 SINE B4 4 74 -91 3 963 817 144 183 21 chrX 49652823 49653014 -116997282 + URR1B DNA MER1_type 2 223 -2 3 963 537 200 60 104 chrX 49653014 49653082 -116997214 + RSINE1 SINE B4 75 131 -34 3 963 876 69 0 0 chrX 49653089 49653205 -116997091 + (TCTCCC)n Simple_repeat Simple_repeat 3 118 0 3 963 570 67 0 0 chrX 49653463 49653538 -116996758 + (TTTCC)n Simple_repeat Simple_repeat 5 79 0 3 963 1148 62 14 0 chrX 49653538 49653684 -116996612 - B1_Mus1 SINE Alu 0 148 1 3 963 333 0 0 0 chrX 49653748 49653785 -116996511 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 963 1937 277 114 21 chrX 49655747 49656569 -116993727 - MER63C DNA AcHobo 0 930 32 3 963 675 223 72 9 chrX 49656691 49656915 -116993381 + MER5C DNA MER1_type 6 252 -61 4 963 274 257 171 0 chrX 49658035 49658105 -116992191 + ID2 SINE ID 2 83 0 4 963 383 231 0 13 chrX 49658148 49658227 -116992069 - ID4_ SINE ID -4 79 2 4 963 513 246 0 25 chrX 49658865 49658986 -116991310 + PB1D7 SINE Alu 1 118 -2 4 963 333 0 0 0 chrX 49659418 49659455 -116990841 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 963 835 133 29 29 chrX 49659580 49659719 -116990577 + B1_Mus2 SINE Alu 2 140 -7 4 963 368 20 20 0 chrX 49659723 49659772 -116990524 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 4 963 341 317 0 142 chrX 49661577 49661650 -116988646 + ID_B1 SINE B4 84 150 -74 4 963 1167 122 22 11 chrX 49661650 49661833 -116988463 + B2_Mm1t SINE B2 1 185 -8 4 963 341 317 0 142 chrX 49661833 49661921 -116988375 + ID_B1 SINE B4 151 222 -2 4 963 486 211 25 76 chrX 49662441 49662559 -116987737 - ID_B1 SINE B4 -1 223 112 4 963 239 263 90 33 chrX 49662697 49662819 -116987477 - MIR SINE MIR -33 229 101 4 963 884 265 124 24 chrX 49662825 49663196 -116987100 + MLT1A1 LTR MaLR 1 408 0 4 963 504 0 0 0 chrX 49663287 49663343 -116986953 + (A)n Simple_repeat Simple_repeat 1 56 0 4 963 249 253 124 62 chrX 49663420 49663517 -116986779 + PB1D10 SINE Alu 5 107 -10 4 963 219 389 14 7 chrX 49663943 49664088 -116986208 - MIR3 SINE MIR -10 198 53 4 963 573 342 113 66 chrX 49664100 49664921 -116985375 + CR1_Mam LINE CR1 635 1494 -710 4 963 441 115 0 0 chrX 49666524 49666602 -116983694 + (TG)n Simple_repeat Simple_repeat 2 79 0 4 963 418 211 149 0 chrX 49666609 49666723 -116983573 + ID_B1 SINE B4 93 223 -1 4 963 778 261 60 32 chrX 49666743 49667059 -116983237 + L1MB1 LINE L1 5818 6142 -26 4 963 411 324 9 0 chrX 49668284 49668392 -116981904 + PB1 SINE Alu 2 110 -17 4 963 931 278 43 0 chrX 49669111 49669341 -116980955 + MTE2b LTR MaLR 2 241 -138 4 963 1206 308 69 70 chrX 49669353 49669993 -116980303 - Charlie1a DNA MER1_type -810 645 7 4 963 254 298 119 99 chrX 49670318 49670571 -116979725 + L2c LINE L2 3113 3370 -17 4 963 844 236 70 0 chrX 49670720 49670919 -116979377 - B3 SINE B2 -2 214 2 4 963 483 301 0 10 chrX 49671787 49671891 -116978405 - PB1D10 SINE Alu -9 108 6 4 963 239 394 0 0 chrX 49671833 49671899 -116978397 - B4A SINE B4 -144 148 83 4 963 362 327 57 138 chrX 49672057 49672440 -116977856 + ORR1E LTR MaLR 8 359 0 4 963 324 0 0 0 chrX 49672444 49672480 -116977816 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 963 252 247 50 88 chrX 49672997 49673077 -116977219 + ID2 SINE ID 3 79 -4 4 963 373 298 17 50 chrX 49673167 49673287 -116977009 - PB1 SINE Alu 0 127 12 4 963 685 182 7 59 chrX 49674369 49674521 -116975775 + B1_Mur2 SINE Alu 6 149 0 4 963 475 302 29 21 chrX 49675311 49675472 -116974824 + MIR SINE MIR 9 177 -99 4 963 195 312 112 51 chrX 49675575 49675673 -116974623 + L2b LINE L2 3272 3375 0 4 964 417 349 56 28 chrX 49676657 49676876 -116973420 + MIRb SINE MIR 5 234 -34 4 964 516 237 44 0 chrX 49677186 49677300 -116972996 + PB1D7 SINE Alu 2 120 0 4 964 1654 21 0 0 chrX 49680590 49680776 -116969520 + B2_Mm1t SINE B2 1 186 -7 4 964 237 231 14 84 chrX 49680938 49681009 -116969287 - MIR3 SINE MIR -16 192 127 4 964 314 247 217 43 chrX 49683062 49683223 -116967073 + L1M4 LINE L1 3561 3749 -2397 4 964 337 179 0 29 chrX 49683231 49683300 -116966996 - B3 SINE B2 -6 210 144 4 964 187 240 58 39 chrX 49684191 49684243 -116966053 - L3 LINE CR1 -3704 785 733 4 964 246 314 23 23 chrX 49684267 49684355 -116965941 + MIR3 SINE MIR 108 195 -13 4 964 234 0 0 0 chrX 49684402 49684428 -116965868 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 4 964 738 202 0 0 chrX 49684428 49684557 -116965739 - B1_Mus1 SINE Alu -12 136 8 4 964 246 62 0 0 chrX 49684905 49684937 -116965359 + (T)n Simple_repeat Simple_repeat 1 32 0 4 964 562 273 7 22 chrX 49685642 49685777 -116964519 - RSINE1 SINE B4 -2 163 31 4 964 1047 271 127 16 chrX 49685786 49686346 -116963950 - L1MB2 LINE L1 -55 6116 5495 4 964 180 77 0 0 chrX 49686880 49686906 -116963390 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 964 38 39 0 0 chrX 49687099 49687151 -116963145 + AT_rich Low_complexity Low_complexity 1 52 0 4 964 211 309 35 0 chrX 49687699 49687787 -116962509 + MIR SINE MIR 129 228 -40 4 964 1928 278 55 24 chrX 49688036 49688617 -116961679 + L1MB8 LINE L1 5313 5889 -289 4 964 378 0 0 0 chrX 49688617 49688659 -116961637 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 964 1928 278 55 24 chrX 49688659 49688915 -116961381 + L1MB8 LINE L1 5890 6176 -2 4 964 676 277 7 0 chrX 49689332 49689473 -116960823 + RSINE1 SINE B4 3 144 -21 4 964 489 34 0 0 chrX 49689476 49689535 -116960761 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 964 33 0 0 0 chrX 49689617 49689650 -116960646 + AT_rich Low_complexity Low_complexity 1 33 0 4 964 308 243 74 70 chrX 49689958 49690150 -116960146 + MIRb SINE MIR 38 248 -20 4 964 570 357 78 21 chrX 49690451 49690783 -116959513 - AmnSINE1 SINE SINE -115 460 110 4 964 460 144 8 141 chrX 49691452 49691573 -116958723 + MT2B LTR ERVL 160 264 -337 4 964 821 153 8 0 chrX 49691475 49691606 -116958690 + B1_Mus2 SINE Alu 15 146 -1 4 964 234 62 0 0 chrX 49691700 49691732 -116958564 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 964 523 325 96 76 chrX 49692313 49692669 -116957627 + L2c LINE L2 3002 3364 -23 4 964 22 0 0 0 chrX 49694284 49694306 -116955990 + AT_rich Low_complexity Low_complexity 1 22 0 4 964 25 0 0 0 chrX 49694669 49694694 -116955602 + AT_rich Low_complexity Low_complexity 1 25 0 4 964 1188 55 0 0 chrX 49695392 49695537 -116954759 - B1_Mus2 SINE Alu -2 145 1 4 964 333 289 149 0 chrX 49695787 49695901 -116954395 + B1F SINE Alu 17 147 -2 4 964 1316 101 5 0 chrX 49696506 49696695 -116953601 - B2_Mm1t SINE B2 -2 191 2 4 964 222 298 18 46 chrX 49696786 49696895 -116953401 + MIRb SINE MIR 120 225 -43 4 964 267 322 44 44 chrX 49696941 49697032 -116953264 + B1_Mus1 SINE Alu 1 91 -57 4 964 339 336 40 73 chrX 49697738 49697766 -116952530 + B4 SINE B4 73 218 -74 4 964 533 260 89 0 chrX 49697766 49697889 -116952407 + B1_Mm SINE Alu 6 139 -8 4 964 351 0 0 0 chrX 49698098 49698137 -116952159 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 964 746 201 28 14 chrX 49699081 49699232 -116951064 - ID_B1 SINE B4 -76 216 65 4 964 1206 28 7 0 chrX 49699326 49699471 -116950825 - B1_Mm SINE Alu 0 147 2 4 964 503 299 132 106 chrX 49699548 49699821 -116950475 - MLT1-int LTR MaLR -15 1356 1077 4 964 183 211 219 62 chrX 49699844 49699940 -116950356 - L2a LINE L2 0 3426 3316 4 964 295 379 67 50 chrX 49701042 49701325 -116948971 + L2c LINE L2 2932 3219 -168 4 964 330 26 0 0 chrX 49702725 49702764 -116947532 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 964 225 378 115 11 chrX 49703051 49703225 -116947071 - MIRb SINE MIR -58 210 19 4 964 619 193 29 15 chrX 49703369 49703506 -116946790 + RMER1C Other Other 1204 1342 0 4 964 1791 172 49 101 chrX 49703651 49704059 -116946237 - RLTR41 LTR ERV1 0 446 60 4 964 278 383 116 53 chrX 49704194 49704858 -116945438 - L3 LINE CR1 -688 3801 3096 4 964 207 0 0 0 chrX 49705425 49705448 -116944848 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4 964 204 194 0 61 chrX 49706572 49706638 -116943658 + A-rich Low_complexity Low_complexity 3 64 0 4 964 234 244 67 34 chrX 49708513 49708602 -116941694 - MIR3 SINE MIR 0 208 117 4 964 4430 12 2 0 chrX 49708605 49709097 -116941199 + MT2_Mm LTR ERVL 1 493 0 4 964 38819 16 14 0 chrX 49709097 49714396 -116935900 + MERVL-int LTR ERVL 1 5371 -114 4 964 402 123 13 40 chrX 49714396 49714472 -116935824 + ORR1A3-int LTR MaLR 567 640 -1323 4 964 302 0 0 0 chrX 49714472 49714510 -116935786 + MERVL-int LTR ERVL 5448 5485 0 4 964 4430 12 2 0 chrX 49714510 49715002 -116935294 + MT2_Mm LTR ERVL 1 493 0 4 964 200 203 164 0 chrX 49716081 49716142 -116934154 + MIR SINE MIR 111 188 -80 4 964 390 198 30 6 chrX 49716966 49717134 -116933162 + (TA)n Simple_repeat Simple_repeat 2 173 0 4 964 352 252 29 10 chrX 49719762 49719866 -116930430 - L1MC LINE L1 -2091 5791 5686 4 964 1101 123 0 0 chrX 49719938 49720117 -116930179 + (GA)n Simple_repeat Simple_repeat 2 180 0 4 964 530 355 29 33 chrX 49721346 49721556 -116928740 + Tigger7 DNA MER2_type 7 215 -2276 4 964 284 245 170 0 chrX 49721572 49721678 -116928618 + Tigger7 DNA MER2_type 2255 2378 -113 4 964 223 250 0 0 chrX 49721705 49721753 -116928543 - ID4 SINE ID -29 54 7 4 964 311 312 0 0 chrX 49722135 49722212 -116928084 - ID4_ SINE ID -6 77 1 4 964 271 212 92 30 chrX 49722293 49722437 -116927859 - L1MA7 LINE L1 0 6312 6153 4 964 213 337 24 0 chrX 49723312 49723395 -116926901 - MIR3 SINE MIR -15 193 109 4 964 342 195 0 0 chrX 49723664 49723741 -116926555 + A-rich Low_complexity Low_complexity 1 77 0 4 964 227 233 23 0 chrX 49724706 49724749 -116925547 - ID_B1 SINE B4 -95 129 86 4 964 419 295 21 7 chrX 49724844 49724984 -116925312 + B1F1 SINE Alu 1 142 -7 4 964 182 256 0 0 chrX 49725224 49725263 -116925033 + L2a LINE L2 3374 3412 -14 4 964 1606 31 5 5 chrX 49726264 49726457 -116923839 - B2_Mm1a SINE B2 0 193 1 4 964 213 0 81 0 chrX 49728558 49728595 -116921701 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 4 964 207 0 0 0 chrX 49728821 49728844 -116921452 + (GCTG)n Simple_repeat Simple_repeat 2 24 0 5 964 321 358 0 10 chrX 49729255 49729351 -116920945 - MER81 DNA AcHobo -1 113 19 5 964 569 265 115 7 chrX 49729407 49729555 -116920741 - ID_B1 SINE B4 -4 220 57 5 964 24 0 0 0 chrX 49729572 49729596 -116920700 + AT_rich Low_complexity Low_complexity 1 24 0 5 964 571 88 137 62 chrX 49730447 49730593 -116919703 - L1_Mus3 LINE L1 -7 6631 6475 5 964 597 254 74 17 chrX 49731062 49731238 -116919058 + ID_B1 SINE B4 36 221 -3 5 964 201 147 0 0 chrX 49731259 49731293 -116919003 + (CAT)n Simple_repeat Simple_repeat 3 36 0 5 964 274 301 0 52 chrX 49731769 49731846 -116918450 - ID4 SINE ID -2 81 9 5 964 186 311 166 50 chrX 49731957 49732096 -116918200 - MIRb SINE MIR -111 157 3 5 964 193 75 0 48 chrX 49732866 49732908 -116917388 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 5 964 22 0 0 0 chrX 49734051 49734073 -116916223 + AT_rich Low_complexity Low_complexity 1 22 0 5 964 241 234 12 72 chrX 49734728 49734811 -116915485 - ID4 SINE ID -1 82 5 5 964 522 0 0 0 chrX 49735025 49735083 -116915213 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 964 249 57 0 0 chrX 49735085 49735120 -116915176 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 5 964 759 269 29 29 chrX 49735476 49735752 -116914544 + B4A SINE B4 2 277 -15 5 964 275 146 18 0 chrX 49735787 49735842 -116914454 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 964 428 275 124 8 chrX 49736606 49736727 -116913569 - RSINE1 SINE B4 -28 137 3 5 964 286 299 0 13 chrX 49738004 49738082 -116912214 + ID4_ SINE ID 2 78 -5 5 964 486 293 14 35 chrX 49738114 49738259 -116912037 + B1_Mur4 SINE Alu 4 145 -5 5 964 201 328 154 61 chrX 49739262 49739476 -116910820 - MIRb SINE MIR -26 242 9 5 964 264 308 43 81 chrX 49739469 49739609 -116910687 + L2a LINE L2 3243 3392 -34 5 964 765 61 0 0 chrX 49739687 49739786 -116910510 + (TCTA)n Simple_repeat Simple_repeat 4 102 0 5 964 1236 211 0 0 chrX 49739802 49740015 -116910281 + B3 SINE B2 1 213 -3 5 964 214 241 0 18 chrX 49740052 49740107 -116910189 + GA-rich Low_complexity Low_complexity 1 54 0 5 964 876 158 168 5 chrX 49740219 49740404 -116909892 - URR1A DNA MER1_type -11 215 1 5 964 180 378 13 26 chrX 49740404 49740480 -116909816 - MIRc SINE MIR -146 122 48 5 964 212 225 151 27 chrX 49740636 49740709 -116909587 + L2a LINE L2 3345 3426 0 5 964 222 385 66 0 chrX 49740855 49740946 -116909350 + MIR SINE MIR 154 250 -12 5 964 1176 68 0 0 chrX 49742288 49742434 -116907862 - B1_Mus2 SINE Alu 0 147 2 5 964 3656 58 0 2 chrX 49742438 49742900 -116907396 - L1_Mus1 LINE L1 0 6567 6107 5 964 2715 33 0 0 chrX 49742900 49743233 -116907063 + L1Md_F2 LINE L1 5590 5922 -660 5 964 384 132 0 0 chrX 49744230 49744313 -116905983 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 5 964 265 311 29 10 chrX 49744417 49744521 -116905775 - Tigger16b DNA Tigger -28 309 204 5 964 497 330 11 37 chrX 49744555 49744744 -116905552 + MIRb SINE MIR 34 217 -51 5 964 268 254 175 0 chrX 49745011 49745074 -116905222 - ID4 SINE ID -9 74 1 5 964 316 288 36 107 chrX 49745074 49745135 -116905161 - B1F SINE Alu 0 149 97 5 964 1231 47 0 0 chrX 49745135 49745283 -116905013 - B1_Mus1 SINE Alu 0 148 1 5 964 316 288 36 107 chrX 49745283 49745361 -116904935 - B1F SINE Alu -53 96 20 5 964 1150 62 7 0 chrX 49745486 49745631 -116904665 + B1_Mm SINE Alu 2 147 0 5 964 400 0 0 52 chrX 49745631 49745689 -116904607 + (CAAAAA)n Simple_repeat Simple_repeat 6 60 0 5 964 324 266 0 0 chrX 49745861 49745925 -116904371 + ID4_ SINE ID 1 64 -19 5 964 717 118 0 0 chrX 49747016 49747126 -116903170 + (TTCC)n Simple_repeat Simple_repeat 4 113 0 5 964 261 0 0 0 chrX 49747126 49747155 -116903141 + (TC)n Simple_repeat Simple_repeat 1 29 0 5 964 1196 88 54 16 chrX 49747155 49747340 -116902956 - B2_Mm2 SINE B2 -2 193 2 5 964 323 363 17 117 chrX 49747538 49747778 -116902518 + L2b LINE L2 3045 3260 -115 5 964 932 68 114 0 chrX 49748863 49748995 -116901301 - B1_Mus2 SINE Alu 0 147 1 5 964 2797 78 35 2 chrX 49749010 49749406 -116900890 - Lx3_Mus LINE L1 -8 7001 6593 5 964 33 0 0 0 chrX 49750205 49750238 -116900058 + GC_rich Low_complexity Low_complexity 1 33 0 5 964 300 247 37 29 chrX 49751234 49751351 -116898945 - MIRc SINE MIR -78 184 81 5 964 33 0 0 0 chrX 49753216 49753249 -116897047 + AT_rich Low_complexity Low_complexity 1 33 0 5 964 587 289 7 13 chrX 49754057 49754211 -116896085 - RSINE1 SINE B4 -12 153 1 5 964 464 327 86 19 chrX 49754328 49754584 -116895712 + B4A SINE B4 1 273 -19 5 964 308 342 25 74 chrX 49755954 49756156 -116894140 + MIRc SINE MIR 17 208 -60 5 964 309 319 22 0 chrX 49756351 49756442 -116893854 - MER5A1 DNA MER1_type -2 164 72 5 964 296 278 22 22 chrX 49756461 49756553 -116893743 + MER5A DNA MER1_type 1 92 -97 5 964 317 326 41 0 chrX 49756565 49756663 -116893633 - PB1D10 SINE Alu -15 102 1 5 964 602 283 0 0 chrX 49756766 49756904 -116893392 + B1_Mur2 SINE Alu 10 147 -2 5 964 255 200 128 37 chrX 49757057 49757166 -116893130 + Lx8 LINE L1 7353 7471 -2 5 964 2571 318 62 26 chrX 49757184 49758273 -116892023 + Charlie1 DNA MER1_type 817 1944 -837 5 964 494 261 133 16 chrX 49758388 49758917 -116891379 + L1M4c LINE L1 2303 2895 -3487 5 964 584 288 8 0 chrX 49758961 49759093 -116891203 - B3 SINE B2 -7 209 77 5 964 316 265 91 37 chrX 49759119 49759280 -116891016 + ORR1E LTR MaLR 204 370 0 5 964 515 300 59 22 chrX 49759280 49759604 -116890692 + L1M4c LINE L1 5206 5541 -841 5 964 231 281 15 30 chrX 49760696 49760762 -116889534 + RMER15 LTR ERVL 403 467 -108 5 964 242 309 94 21 chrX 49761120 49761216 -116889080 + MIR3 SINE MIR 102 204 -4 5 964 522 0 0 0 chrX 49762841 49762899 -116887397 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 964 573 15 0 0 chrX 49762984 49763050 -116887246 + (TC)n Simple_repeat Simple_repeat 1 66 0 5 964 209 318 0 15 chrX 49764370 49764437 -116885859 + GA-rich Low_complexity Low_complexity 2 67 0 5 964 255 299 150 70 chrX 49765494 49765721 -116884575 + L2c LINE L2 3134 3378 -9 5 964 282 337 56 61 chrX 49766829 49767009 -116883287 + MIR3 SINE MIR 2 180 -28 5 964 778 123 19 0 chrX 49768402 49768557 -116881739 + Lx9 LINE L1 7481 7638 -6 5 964 285 269 41 89 chrX 49770186 49770524 -116879772 + Lx9 LINE L1 7321 7642 -2 5 964 189 147 0 0 chrX 49772079 49772113 -116878183 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 5 964 207 0 0 0 chrX 49773356 49773379 -116876917 + (T)n Simple_repeat Simple_repeat 1 23 0 5 964 750 23 0 0 chrX 49774167 49774255 -116876041 + (GA)n Simple_repeat Simple_repeat 2 89 0 5 964 744 325 59 43 chrX 49774531 49775012 -116875284 + LTR40b LTR ERVL 49 517 -2 5 964 232 273 137 24 chrX 49775198 49775322 -116874974 + Charlie26a DNA MER1_type 57 194 -131 5 964 243 278 83 0 chrX 49776072 49776144 -116874152 + ID4 SINE ID 4 81 -2 5 964 23 0 0 0 chrX 49776433 49776456 -116873840 + AT_rich Low_complexity Low_complexity 1 23 0 5 964 271 319 43 58 chrX 49776514 49776655 -116873641 + MIRb SINE MIR 2 133 -129 5 964 269 152 174 0 chrX 49776941 49777033 -116873263 + Lx9 LINE L1 7535 7642 -2 5 964 237 296 82 27 chrX 49777258 49777331 -116872965 + ID4_ SINE ID 7 83 0 5 964 690 226 87 65 chrX 49777777 49777986 -116872310 + B3A SINE B2 2 196 -2 5 964 263 329 117 33 chrX 49779358 49779533 -116870763 + MIRc SINE MIR 5 190 -18 5 964 201 121 0 0 chrX 49779751 49779784 -116870512 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 5 964 299 287 40 41 chrX 49780482 49780653 -116869643 + MIR SINE MIR 5 169 -93 5 964 244 319 32 42 chrX 49781135 49781230 -116869066 + MIRb SINE MIR 60 153 -115 5 964 186 108 0 75 chrX 49782824 49782864 -116867432 + L4 LINE RTE 784 820 -1209 5 964 485 271 67 8 chrX 49784138 49784272 -116866024 + B1_Mur1 SINE Alu 1 142 -7 5 964 348 295 23 23 chrX 49784348 49784480 -116865816 - MIRb SINE MIR -86 182 51 5 964 683 258 0 43 chrX 49785504 49785642 -116864654 - RSINE1 SINE B4 0 165 34 5 964 271 317 151 12 chrX 49785679 49785845 -116864451 - L3 LINE CR1 -408 4081 3893 5 964 251 228 179 0 chrX 49786267 49786365 -116863931 - MIRc SINE MIR -89 179 71 5 964 183 204 0 0 chrX 49786457 49786501 -116863795 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 5 964 712 274 80 21 chrX 49786503 49786828 -116863468 + L1MC LINE L1 5282 5625 -2160 5 964 1122 74 0 0 chrX 49787455 49787603 -116862693 + B1_Mus1 SINE Alu 1 148 0 5 964 331 209 6 54 chrX 49787638 49787805 -116862491 + (TAGA)n Simple_repeat Simple_repeat 2 160 0 5 964 334 345 61 10 chrX 49787982 49788178 -116862118 + L4 LINE RTE 1719 1924 -105 5 964 774 239 84 11 chrX 49789231 49789421 -116860875 - B3 SINE B2 -4 212 9 5 964 263 267 133 33 chrX 49789642 49789762 -116860534 - MIRc SINE MIR -96 172 41 5 964 415 325 150 19 chrX 49789868 49790081 -116860215 - MIR SINE MIR -20 242 2 5 964 310 293 26 13 chrX 49790098 49790174 -116860122 + B4A SINE B4 27 103 -189 5 964 349 109 0 0 chrX 49790191 49790246 -116860050 - B1_Mus2 SINE Alu -2 145 91 6 964 772 267 5 22 chrX 49790335 49790519 -116859777 + B3 SINE B2 30 210 -6 6 964 432 300 68 15 chrX 49790536 49790828 -116859468 + L1MA9 LINE L1 5942 6260 -74 6 964 552 292 8 8 chrX 49791068 49791199 -116859097 + ID_B1 SINE B4 79 209 -15 6 964 188 286 91 45 chrX 49791817 49791883 -116858413 + L2 LINE L2 73 141 -3278 6 964 190 247 75 85 chrX 49793228 49793334 -116856962 - L3 LINE CR1 -2232 2257 2153 6 964 253 350 56 21 chrX 49793899 49794042 -116856254 - MIRc SINE MIR -81 187 40 6 964 339 44 0 0 chrX 49795020 49795065 -116855231 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 964 317 347 99 33 chrX 49795708 49795860 -116854436 + RSINE1 SINE B4 2 163 -2 6 964 264 347 67 71 chrX 49797791 49798030 -116852266 + MIR SINE MIR 20 257 -5 6 964 459 0 0 0 chrX 49799555 49799606 -116850690 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 964 305 234 113 35 chrX 49799708 49799823 -116850473 - PB1 SINE Alu -2 125 2 6 964 300 27 0 0 chrX 49802105 49802142 -116848154 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 964 308 298 70 38 chrX 49802143 49802300 -116847996 - L1MB7 LINE L1 -90 6094 5933 6 964 283 0 71 0 chrX 49802306 49802348 -116847948 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 6 964 353 219 0 42 chrX 49802776 49802895 -116847401 - Lx9 LINE L1 -1 7643 7530 6 964 855 102 8 8 chrX 49803722 49803851 -116846445 - B1_Mur4 SINE Alu -1 149 21 6 964 326 224 14 139 chrX 49803757 49803928 -116846368 - MT2B LTR ERVL -320 264 109 6 964 618 269 25 25 chrX 49804248 49804408 -116845888 + RSINE1 SINE B4 3 162 -3 6 964 219 69 0 0 chrX 49807155 49807184 -116843112 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 965 270 0 0 0 chrX 49809993 49810023 -116840273 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6 965 450 0 0 0 chrX 49810668 49810718 -116839578 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 965 293 220 72 39 chrX 49810804 49810910 -116839386 - L1M2 LINE L1 -449 5851 5742 6 965 283 207 52 0 chrX 49811641 49811699 -116838597 - RSINE1 SINE B4 -38 127 67 6 965 1066 74 0 0 chrX 49811776 49811911 -116838385 + B1_Mus1 SINE Alu 5 139 -9 6 965 2022 184 60 50 chrX 49812192 49812609 -116837687 + MTC LTR MaLR 1 421 0 6 965 327 323 39 23 chrX 49812686 49812816 -116837480 - MER45A DNA Tip100 -12 166 35 6 965 896 146 28 7 chrX 49812848 49812993 -116837303 + B1_Mur4 SINE Alu 1 148 -2 6 965 459 0 0 0 chrX 49813739 49813790 -116836506 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 6 965 299 289 132 86 chrX 49814776 49814973 -116835323 + B4 SINE B4 24 229 -63 6 965 217 339 0 0 chrX 49815035 49815100 -116835196 + GA-rich Low_complexity Low_complexity 2 66 0 6 965 387 0 0 0 chrX 49815812 49815855 -116834441 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 965 234 0 0 0 chrX 49817497 49817523 -116832773 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 965 319 286 52 26 chrX 49817775 49817890 -116832406 + MER5B DNA MER1_type 12 129 -49 6 965 288 0 0 0 chrX 49818375 49818407 -116831889 + (GA)n Simple_repeat Simple_repeat 1 32 0 6 965 411 213 9 0 chrX 49819564 49819672 -116830624 + Lx9 LINE L1 7523 7631 -13 6 965 414 0 0 0 chrX 49819900 49819946 -116830350 + (GA)n Simple_repeat Simple_repeat 1 46 0 6 965 426 312 55 60 chrX 49820943 49821054 -116829242 - RMER30 DNA MER1_type -1 201 97 6 965 417 129 32 0 chrX 49821054 49821147 -116829149 - L1Md_A LINE L1 0 6582 6487 6 965 426 312 55 60 chrX 49821147 49821236 -116829060 - RMER30 DNA MER1_type -106 96 2 6 965 502 268 182 13 chrX 49821447 49821606 -116828690 + MER5A DNA MER1_type 4 189 0 6 965 227 320 12 25 chrX 49822191 49822271 -116828025 + MIR SINE MIR 2 80 -182 6 965 259 295 38 13 chrX 49822558 49822637 -116827659 + ID SINE ID 3 83 -141 6 965 329 191 15 0 chrX 49824392 49824460 -116825836 + BLACKJACK DNA AcHobo 2875 2943 -1 6 965 935 251 0 9 chrX 49825754 49825975 -116824321 - ID_B1 SINE B4 -4 220 2 6 965 201 39 0 0 chrX 49826899 49826925 -116823371 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 965 243 0 0 0 chrX 49828254 49828281 -116822015 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 965 333 315 64 77 chrX 49828601 49828835 -116821461 - MIR SINE MIR -19 243 13 6 965 454 253 18 25 chrX 49829451 49829595 -116820701 - PB1D10 SINE Alu 0 149 6 6 965 1370 293 66 19 chrX 49829783 49830207 -116820089 + Tigger7 DNA MER2_type 29 472 -2019 6 965 553 283 100 80 chrX 49830327 49830370 -116819926 - MTEa LTR MaLR 0 379 339 6 965 1199 50 0 0 chrX 49830370 49830510 -116819786 + B1_Mm SINE Alu 1 140 -7 6 965 207 0 0 0 chrX 49830515 49830538 -116819758 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 6 965 553 283 100 80 chrX 49830538 49830738 -116819558 - MTEa LTR MaLR -44 335 125 6 965 492 62 0 0 chrX 49832150 49832214 -116818082 + (TAAA)n Simple_repeat Simple_repeat 2 65 0 6 965 189 107 0 0 chrX 49832927 49832955 -116817341 + (A)n Simple_repeat Simple_repeat 1 28 0 6 965 304 266 31 41 chrX 49832958 49833056 -116817240 + MIRb SINE MIR 26 122 -146 6 965 2940 178 67 12 chrX 49834126 49834791 -116815505 + Lx4B LINE L1 6217 7037 -21 6 965 315 0 0 0 chrX 49834792 49834827 -116815469 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 6 965 963 219 44 5 chrX 49835226 49835432 -116814864 - B3 SINE B2 -2 214 1 6 965 601 238 34 13 chrX 49836282 49836431 -116813865 - B3 SINE B2 0 216 65 6 965 233 283 18 41 chrX 49837727 49837831 -116812465 - L2a LINE L2 -4 3422 3285 6 965 248 179 62 10 chrX 49838417 49838513 -116811783 + (TA)n Simple_repeat Simple_repeat 1 101 0 6 965 488 289 44 19 chrX 49838668 49838827 -116811469 + RSINE1 SINE B4 2 164 -1 6 965 233 324 0 0 chrX 49838953 49839027 -116811269 + ID4 SINE ID 2 75 -8 6 965 427 328 140 40 chrX 49839188 49839537 -116810759 + L4 LINE RTE 1431 1814 -215 6 965 308 364 107 15 chrX 49840055 49840186 -116810110 - PB1D10 SINE Alu -5 144 2 6 965 608 259 14 21 chrX 49840331 49840473 -116809823 - B1_Mur4 SINE Alu -6 144 4 6 965 655 291 49 106 chrX 49841672 49842222 -116808074 + LTR40a LTR ERVL 1 519 0 6 965 1244 161 57 4 chrX 49844237 49844499 -116805797 - Lx9 LINE L1 -29 7615 7340 6 965 314 252 58 0 chrX 49844494 49844597 -116805699 + L1MA9 LINE L1 6197 6305 -7 6 965 431 332 32 2 chrX 49844817 49844994 -116805302 + MIR3 SINE MIR 15 203 -65 6 965 236 375 42 0 chrX 49845279 49845375 -116804921 + MIRb SINE MIR 161 260 -8 6 965 889 299 153 29 chrX 49846544 49847029 -116803267 + MLT1F LTR MaLR 1 545 -3 6 965 497 291 37 21 chrX 49847484 49847726 -116802570 + L1MA9 LINE L1 6067 6312 0 6 965 22 0 0 0 chrX 49848894 49848916 -116801380 + AT_rich Low_complexity Low_complexity 1 22 0 6 965 262 244 233 44 chrX 49849292 49849472 -116800824 - MamRep434 DNA TcMar -97 329 116 6 965 1230 177 0 0 chrX 49851261 49851459 -116798837 + B3 SINE B2 1 198 -18 6 965 22 0 0 0 chrX 49851472 49851494 -116798802 + AT_rich Low_complexity Low_complexity 1 22 0 6 965 636 218 155 11 chrX 49852899 49853080 -116797216 - B3 SINE B2 -7 209 3 6 965 209 322 91 61 chrX 49853674 49853806 -116796490 - L3 LINE CR1 -3446 1043 908 6 965 549 286 22 28 chrX 49856182 49856362 -116793934 + B3A SINE B2 2 180 -18 6 965 30 27 0 0 chrX 49856448 49856485 -116793811 + AT_rich Low_complexity Low_complexity 1 37 0 6 965 353 309 65 7 chrX 49857414 49857567 -116792729 + L1M5 LINE L1 5393 5554 -570 6 965 559 293 71 26 chrX 49857881 49858035 -116792261 - RSINE1 SINE B4 0 165 5 6 965 289 293 13 131 chrX 49858064 49858217 -116792079 - B3A SINE B2 -18 180 46 6 965 408 351 17 35 chrX 49859170 49859344 -116790952 + MIR3 SINE MIR 1 171 -37 6 965 432 0 0 0 chrX 49860647 49860695 -116789601 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 965 341 256 110 11 chrX 49860900 49860991 -116789305 + PB1D10 SINE Alu 18 117 0 6 965 483 18 0 0 chrX 49861516 49861572 -116788724 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 965 513 84 0 0 chrX 49861572 49861643 -116788653 + (GA)n Simple_repeat Simple_repeat 2 72 0 6 965 521 290 45 15 chrX 49861643 49861776 -116788520 - B3A SINE B2 -56 142 6 6 965 671 282 129 4 chrX 49862434 49862690 -116787606 + B4A SINE B4 3 290 -2 6 965 197 243 0 14 chrX 49862734 49862805 -116787491 + GA-rich Low_complexity Low_complexity 1 70 0 6 965 264 30 0 0 chrX 49863816 49863849 -116786447 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 965 324 0 0 0 chrX 49863849 49863884 -116786412 + (GA)n Simple_repeat Simple_repeat 2 37 0 6 965 487 53 27 0 chrX 49863884 49863959 -116786337 + (CA)n Simple_repeat Simple_repeat 1 77 0 6 965 500 265 15 5 chrX 49864835 49864969 -116785327 - PB1D7 SINE Alu -18 132 2 6 965 255 61 0 0 chrX 49866739 49866772 -116783524 + (CCAA)n Simple_repeat Simple_repeat 3 35 0 6 965 194 200 19 39 chrX 49867428 49867480 -116782816 - L2c LINE L2 -81 3306 3256 6 965 450 0 0 0 chrX 49868076 49868126 -116782170 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 965 210 374 76 16 chrX 49869740 49869925 -116780371 + L2 LINE L2 2355 2550 -869 6 965 525 265 68 109 chrX 49870209 49870429 -116779867 + B3A SINE B2 6 216 0 7 965 258 331 55 0 chrX 49872091 49872218 -116778078 + CR1_Mam LINE CR1 2015 2148 -56 7 965 344 365 0 69 chrX 49872241 49872289 -116778007 + ID_B1 SINE B4 68 215 -9 7 965 396 294 45 18 chrX 49872289 49872400 -116777896 + B1F SINE Alu 27 140 -9 7 965 564 298 138 0 chrX 49872507 49872688 -116777608 + B3 SINE B2 1 206 -10 7 965 672 83 0 0 chrX 49874397 49874493 -116775803 + (TG)n Simple_repeat Simple_repeat 2 97 0 7 965 233 373 0 0 chrX 49874509 49874568 -116775728 - ID4_ SINE ID -10 73 15 7 965 207 114 0 0 chrX 49874653 49874688 -116775608 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 965 633 106 0 0 chrX 49876540 49876644 -116773652 + (TG)n Simple_repeat Simple_repeat 1 104 0 7 965 219 36 0 0 chrX 49876644 49876671 -116773625 + (CAGAGA)n Simple_repeat Simple_repeat 3 30 0 7 965 238 371 52 0 chrX 49877529 49877542 -116772754 + ID_B1 SINE B4 68 169 -55 7 965 240 369 36 0 chrX 49877542 49877626 -116772670 + PB1D10 SINE Alu 2 88 -29 7 965 212 0 36 0 chrX 49877749 49877777 -116772519 + (TTG)n Simple_repeat Simple_repeat 2 30 0 7 965 336 175 0 0 chrX 49878195 49878258 -116772038 + T-rich Low_complexity Low_complexity 1 63 0 7 965 305 302 83 0 chrX 49880706 49880731 -116769565 - B3A SINE B2 -88 110 7 7 965 329 282 14 0 chrX 49880731 49880802 -116769494 - RSINE1 SINE B4 -86 79 8 7 965 739 247 169 29 chrX 49881295 49881574 -116768722 - RMER5 LTR ERV1 -177 357 40 7 965 193 345 0 0 chrX 49883233 49883291 -116767005 - MIRb SINE MIR -95 173 116 7 965 308 239 90 18 chrX 49883342 49883453 -116766843 - L1MA9 LINE L1 -13 6287 6169 7 965 483 300 23 24 chrX 49883454 49883717 -116766579 - L1MA9 LINE L1 -239 6052 5782 7 965 898 264 42 25 chrX 49883791 49884264 -116766032 - L1MA9 LINE L1 -662 5635 5150 7 965 251 309 0 0 chrX 49884301 49884369 -116765927 - Tigger7 DNA MER2_type -2413 78 11 7 965 444 19 0 0 chrX 49884394 49884447 -116765849 + (CATA)n Simple_repeat Simple_repeat 2 54 0 7 965 261 0 0 0 chrX 49884455 49884484 -116765812 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 965 227 328 35 0 chrX 49884489 49884547 -116765749 + Tigger7 DNA MER2_type 2425 2484 -7 7 965 1161 56 0 0 chrX 49884860 49885002 -116765294 + B1_Mus1 SINE Alu 1 142 -6 7 965 429 279 15 97 chrX 49885530 49885736 -116764560 + Lx9 LINE L1 6988 7176 -468 7 965 290 133 173 58 chrX 49885755 49885859 -116764437 + Lx8 LINE L1 7353 7468 -5 7 965 676 219 0 0 chrX 49885883 49885997 -116764299 + B3 SINE B2 91 204 -12 7 965 344 280 93 0 chrX 49886519 49886626 -116763670 + PB1D10 SINE Alu 1 117 0 7 965 417 20 0 0 chrX 49887330 49887380 -116762916 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 7 965 905 39 23 8 chrX 49887382 49887513 -116762783 + (GAAAA)n Simple_repeat Simple_repeat 4 136 0 7 965 522 0 0 0 chrX 49888619 49888677 -116761619 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 7 965 593 252 46 0 chrX 49888778 49889007 -116761289 - L1MA4 LINE L1 -427 5873 5621 7 965 487 250 18 9 chrX 49889732 49889845 -116760451 + B1F SINE Alu 9 122 -27 7 965 460 244 95 24 chrX 49889913 49890039 -116760257 + B3 SINE B2 82 216 0 7 965 243 0 0 0 chrX 49891677 49891704 -116758592 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 7 965 1121 52 15 0 chrX 49892692 49892828 -116757468 + B1_Mus2 SINE Alu 1 138 -9 7 965 650 263 103 0 chrX 49893244 49893438 -116756858 + ID_B1 SINE B4 2 215 -9 7 965 24 53 0 0 chrX 49896246 49896284 -116754012 + AT_rich Low_complexity Low_complexity 1 38 0 7 965 406 253 33 11 chrX 49896420 49896512 -116753784 + B1F SINE Alu 25 118 -31 7 965 346 325 17 8 chrX 49896512 49896538 -116753758 + ID_B1 SINE B4 106 224 0 7 965 304 279 89 61 chrX 49896859 49897073 -116753223 - L1M5 LINE L1 -346 5778 5559 7 965 228 328 0 0 chrX 49897102 49897163 -116753133 + (CATATA)n Simple_repeat Simple_repeat 4 64 0 7 965 1614 230 112 40 chrX 49897728 49898230 -116752066 - L3 LINE CR1 -364 4125 3588 7 965 192 293 117 108 chrX 49898255 49898366 -116751930 + L2b LINE L2 3264 3375 0 7 965 527 256 139 43 chrX 49898370 49898578 -116751718 - L3 LINE CR1 -941 3548 3321 7 965 428 185 31 12 chrX 49898804 49898896 -116751400 - PB1D10 SINE Alu 0 120 24 7 965 234 170 43 0 chrX 49900273 49900320 -116749976 + MTE2a LTR MaLR 1 49 -330 7 965 198 91 0 0 chrX 49901938 49901971 -116748325 + (A)n Simple_repeat Simple_repeat 1 33 0 7 965 441 168 119 18 chrX 49902288 49902397 -116747899 - MIRb SINE MIR -1 267 148 7 965 207 132 0 0 chrX 49902930 49902946 -116747350 + (TA)n Simple_repeat Simple_repeat 1 16 0 7 965 279 0 0 0 chrX 49902946 49902977 -116747319 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 965 207 132 0 0 chrX 49902977 49902998 -116747298 + (TA)n Simple_repeat Simple_repeat 2 22 0 7 965 282 333 0 0 chrX 49903582 49903660 -116746636 + ID4_ SINE ID 3 80 -3 7 965 621 75 0 0 chrX 49903935 49904029 -116746267 - L1_Mus1 LINE L1 0 6567 6474 7 965 382 343 0 0 chrX 49904139 49904241 -116746055 + PB1D10 SINE Alu 1 102 -15 7 965 401 229 275 0 chrX 49905103 49905212 -116745084 + B1_Mur1 SINE Alu 3 141 -8 7 965 338 57 19 0 chrX 49906264 49906317 -116743979 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 7 965 303 28 0 0 chrX 49906663 49906699 -116743597 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 965 256 301 24 0 chrX 49906761 49906844 -116743452 + PB1D10 SINE Alu 7 91 -26 7 965 333 140 0 0 chrX 49906848 49906905 -116743391 + (TGGA)n Simple_repeat Simple_repeat 4 60 0 7 965 666 217 31 0 chrX 49907307 49907436 -116742860 + B1_Mur4 SINE Alu 18 150 0 7 965 349 314 191 5 chrX 49907665 49907854 -116742442 + L1M5 LINE L1 5566 5789 -335 7 965 22 0 0 0 chrX 49908035 49908057 -116742239 + AT_rich Low_complexity Low_complexity 1 22 0 7 965 434 251 61 28 chrX 49908110 49908290 -116742006 - L1MC4a LINE L1 -84 7798 7613 7 965 360 167 31 0 chrX 49910267 49910363 -116739933 + (CA)n Simple_repeat Simple_repeat 2 100 0 7 965 705 277 21 16 chrX 49911148 49911339 -116738957 - B3A SINE B2 0 198 7 7 965 21 0 0 0 chrX 49911658 49911679 -116738617 + AT_rich Low_complexity Low_complexity 1 21 0 7 965 212 321 107 51 chrX 49912372 49912549 -116737747 + L3 LINE CR1 3194 3380 -1109 7 965 213 401 78 17 chrX 49912750 49912930 -116737366 + L3 LINE CR1 3449 3639 -850 7 965 254 270 0 53 chrX 49914413 49914507 -116735789 + MLT1A1 LTR MaLR 319 407 -1 7 965 375 282 53 15 chrX 49914507 49914640 -116735656 - L1M2 LINE L1 -563 5749 5612 7 965 282 314 65 19 chrX 49915601 49915708 -116734588 + MER20 DNA MER1_type 91 202 -17 7 965 192 343 44 60 chrX 49915978 49916161 -116734135 - L2c LINE L2 -178 3209 3030 7 965 182 368 0 17 chrX 49916211 49916269 -116734027 + MIRm SINE MIR 97 153 -123 7 965 226 233 100 0 chrX 49917255 49917315 -116732981 - MIR3 SINE MIR -3 205 140 7 965 264 267 0 91 chrX 49917450 49917549 -116732747 - Charlie4z DNA MER1_type -63 104 15 7 965 233 182 0 0 chrX 49917654 49917698 -116732598 + ID SINE ID 1 44 -180 7 965 409 165 89 0 chrX 49918988 49919067 -116731229 + Lx8 LINE L1 7246 7331 -142 7 965 860 171 0 7 chrX 49919425 49919572 -116730724 - B1_Mm SINE Alu 0 147 2 7 965 391 311 54 7 chrX 49919579 49919728 -116730568 - MIRc SINE MIR -60 208 53 7 965 438 370 17 6 chrX 49920325 49920499 -116729797 - MIR3 SINE MIR -9 199 24 7 965 246 302 0 31 chrX 49921357 49921422 -116728874 + ID4_ SINE ID 3 65 -18 7 965 434 248 52 22 chrX 49921545 49921681 -116728615 - MIRb SINE MIR -21 247 108 7 965 688 281 146 24 chrX 49921733 49922028 -116728268 - MamRep434 DNA TcMar -94 332 2 7 965 352 329 109 23 chrX 49923715 49923889 -116726407 + MIRb SINE MIR 2 190 -78 7 965 228 100 0 0 chrX 49924214 49924254 -116726042 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 7 965 319 229 220 0 chrX 49924895 49925013 -116725283 - B1F1 SINE Alu -5 144 1 7 965 293 281 22 33 chrX 49925020 49925112 -116725184 - MIRc SINE MIR -37 231 141 7 965 24 53 0 0 chrX 49925799 49925837 -116724459 + AT_rich Low_complexity Low_complexity 1 38 0 7 965 183 204 0 0 chrX 49925854 49925908 -116724388 + (TA)n Simple_repeat Simple_repeat 1 54 0 7 965 28 29 0 0 chrX 49926023 49926058 -116724238 + AT_rich Low_complexity Low_complexity 1 35 0 7 965 272 233 0 0 chrX 49926136 49926196 -116724100 + Lx8 LINE L1 5847 5906 -1567 7 965 213 65 0 0 chrX 49926214 49926245 -116724051 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 7 965 229 286 0 0 chrX 49927513 49927597 -116722699 + (CA)n Simple_repeat Simple_repeat 2 85 0 7 965 240 314 126 38 chrX 49928341 49928500 -116721796 + Arthur1A DNA Tip100 3 175 -2 7 965 473 338 38 10 chrX 49928785 49928994 -116721302 + MIR SINE MIR 5 219 -43 7 965 234 0 0 0 chrX 49931138 49931164 -116719132 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 965 306 0 0 0 chrX 49931318 49931352 -116718944 + (A)n Simple_repeat Simple_repeat 1 34 0 7 965 609 261 0 0 chrX 49931388 49931518 -116718778 - RSINE1 SINE B4 -31 134 5 7 965 387 332 96 15 chrX 49931735 49931934 -116718362 - Tigger15a DNA TcMar -366 349 135 7 965 416 267 88 15 chrX 49932374 49932511 -116717785 + MIR SINE MIR 115 261 -1 7 965 25 0 0 0 chrX 49933345 49933370 -116716926 + AT_rich Low_complexity Low_complexity 1 25 0 7 965 821 247 80 66 chrX 49934492 49934778 -116715518 + B4A SINE B4 3 292 0 8 965 643 299 29 19 chrX 49934882 49935118 -116715178 + MIR SINE MIR 4 234 -34 8 965 264 30 0 0 chrX 49935451 49935484 -116714812 + (TGG)n Simple_repeat Simple_repeat 3 35 0 8 965 1117 78 0 0 chrX 49935630 49935772 -116714524 - B1_Mus1 SINE Alu -5 143 2 8 965 342 0 0 0 chrX 49936175 49936213 -116714083 + (TC)n Simple_repeat Simple_repeat 1 38 0 8 965 384 40 0 0 chrX 49936213 49936262 -116714034 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 965 254 343 83 14 chrX 49936682 49936827 -116713469 - L2a LINE L2 -10 3416 3262 8 965 349 260 48 107 chrX 49936936 49937104 -116713192 + L1ME1 LINE L1 5912 6069 -110 8 965 225 0 0 0 chrX 49937373 49937398 -116712898 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 8 965 521 355 90 36 chrX 49937500 49937857 -116712439 + LTR16B2 LTR ERVL 5 380 -82 8 965 200 296 0 0 chrX 49937965 49938009 -116712287 - L2a LINE L2 -35 3391 3348 8 966 6950 56 5 1 chrX 49939367 49940239 -116710057 + L1Md_F2 LINE L1 5708 6582 0 8 966 980 215 26 10 chrX 49940922 49941115 -116709181 + B3 SINE B2 14 209 -7 8 966 716 52 278 0 chrX 49941529 49941644 -116708652 - B1_Mus2 SINE Alu 0 147 1 8 966 370 326 2 0 chrX 49942451 49942568 -116707728 + MIR SINE MIR 57 170 -98 8 966 414 236 72 16 chrX 49942741 49942866 -116707430 + L1ME2 LINE L1 6026 6157 -7 8 966 256 253 50 81 chrX 49944353 49944452 -116705844 - L2c LINE L2 -6 3381 3286 8 966 550 314 24 6 chrX 49944591 49944761 -116705535 - B3A SINE B2 -25 173 1 8 966 1318 114 0 0 chrX 49945111 49945287 -116705009 + B2_Mm2 SINE B2 1 176 -19 8 966 204 192 53 88 chrX 49946338 49946395 -116703901 - MIR SINE MIR -84 124 70 8 966 925 133 0 0 chrX 49946770 49946913 -116703383 - URR1B DNA MER1_type 0 225 83 8 966 192 345 95 52 chrX 49946996 49947112 -116703184 + L3 LINE CR1 4332 4452 -37 8 966 674 306 130 81 chrX 49947827 49948258 -116702038 + MLT1C LTR MaLR 9 460 -7 8 966 198 71 0 0 chrX 49949680 49949708 -116700588 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 966 492 132 0 0 chrX 49949709 49949792 -116700504 + (GA)n Simple_repeat Simple_repeat 2 84 0 8 966 641 280 70 14 chrX 49950602 49950816 -116699480 + MIRb SINE MIR 34 259 -9 8 966 786 89 0 0 chrX 49950906 49951018 -116699278 + (TTTC)n Simple_repeat Simple_repeat 1 112 0 8 966 495 0 0 0 chrX 49951094 49951149 -116699147 + (TTTTA)n Simple_repeat Simple_repeat 3 57 0 8 966 396 0 0 0 chrX 49951150 49951194 -116699102 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 966 546 16 0 0 chrX 49953077 49953140 -116697156 + (GA)n Simple_repeat Simple_repeat 2 64 0 8 966 227 65 0 0 chrX 49953580 49953611 -116696685 - B3A SINE B2 -166 32 2 8 966 237 202 37 37 chrX 49955037 49955119 -116695177 + CT-rich Low_complexity Low_complexity 4 85 0 8 966 313 227 0 29 chrX 49955292 49955360 -116694936 - MER5A1 DNA MER1_type -6 160 95 8 966 186 340 140 54 chrX 49955566 49956008 -116694288 - L2 LINE L2 -826 2593 2114 8 966 458 297 77 0 chrX 49956074 49956223 -116694073 + MIRc SINE MIR 12 174 -94 8 966 660 260 5 60 chrX 49956411 49956595 -116693701 + B3A SINE B2 22 195 -3 8 966 1021 65 43 0 chrX 49956701 49956840 -116693456 + B2_Mm2 SINE B2 25 169 -26 8 966 477 0 0 0 chrX 49956843 49956896 -116693400 + (GAAA)n Simple_repeat Simple_repeat 2 54 0 8 966 473 32 16 0 chrX 49957132 49957195 -116693101 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 8 966 219 276 77 58 chrX 49957464 49957568 -116692728 + L2 LINE L2 2249 2354 -1065 8 966 642 264 115 24 chrX 49957732 49957984 -116692312 - B4 SINE B4 -16 276 2 8 966 714 289 41 35 chrX 49958370 49958567 -116691729 + RMER30 DNA MER1_type 2 199 -3 8 966 211 351 26 26 chrX 49960210 49960324 -116689972 - L2c LINE L2 0 3387 3274 8 966 1106 152 79 0 chrX 49961190 49961368 -116688928 - B2_Mm2 SINE B2 -2 193 2 8 966 322 273 11 0 chrX 49962806 49962894 -116687402 + L2c LINE L2 3255 3343 -44 8 966 201 147 0 0 chrX 49963238 49963272 -116687024 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 966 321 26 0 0 chrX 49964979 49965017 -116685279 + (TC)n Simple_repeat Simple_repeat 2 39 0 8 966 405 0 0 0 chrX 49965017 49965061 -116685235 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 966 220 159 0 55 chrX 49967155 49967228 -116683068 + (CGGGG)n Simple_repeat Simple_repeat 4 72 0 8 966 378 0 0 0 chrX 49967648 49967690 -116682606 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 966 480 35 0 0 chrX 49967983 49968041 -116682255 + (TG)n Simple_repeat Simple_repeat 1 58 0 8 966 482 304 152 54 chrX 49968638 49969385 -116680911 - L2c LINE L2 0 3387 2566 8 966 191 222 67 0 chrX 49969409 49969454 -116680842 - L2a LINE L2 -9 3417 3370 8 966 325 284 8 57 chrX 49970621 49970744 -116679552 + PB1 SINE Alu 11 127 0 8 966 306 0 0 0 chrX 49970752 49970786 -116679510 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 966 509 30 0 15 chrX 49972339 49972407 -116677889 + (TG)n Simple_repeat Simple_repeat 1 67 0 8 966 649 304 0 12 chrX 49972863 49973023 -116677273 + RSINE1 SINE B4 2 159 -6 8 966 23 33 0 0 chrX 49973042 49973072 -116677224 + AT_rich Low_complexity Low_complexity 1 30 0 8 966 1214 69 7 0 chrX 49973156 49973301 -116676995 + B1_Mm SINE Alu 1 146 -1 8 966 24 53 0 0 chrX 49973684 49973722 -116676574 + AT_rich Low_complexity Low_complexity 1 38 0 8 966 241 254 164 0 chrX 49973727 49973794 -116676502 - PB1 SINE Alu -26 101 24 8 966 1213 88 0 0 chrX 49973926 49974073 -116676223 - B1_Mus1 SINE Alu 0 148 2 8 966 198 399 67 11 chrX 49974850 49975030 -116675266 + MIR3 SINE MIR 15 204 -4 8 966 234 279 16 0 chrX 49975073 49975134 -116675162 + L2a LINE L2 3363 3424 -2 8 966 385 268 171 0 chrX 49975377 49975500 -116674796 - B1F1 SINE Alu 0 149 6 8 966 265 307 72 13 chrX 49975730 49975882 -116674414 - Tigger15a DNA TcMar -121 594 434 8 966 393 338 88 0 chrX 49976116 49976252 -116674044 + MIRb SINE MIR 7 154 -114 8 966 424 247 160 0 chrX 49976277 49976427 -116673869 + L1M3 LINE L1 5487 5660 -508 8 966 488 267 9 19 chrX 49976617 49976724 -116673572 + PB1D7 SINE Alu 2 107 -13 8 966 1247 28 21 0 chrX 49976727 49976870 -116673426 - B1_Mus1 SINE Alu -1 147 2 8 966 740 188 279 22 chrX 49976891 49977056 -116673240 - Lx9 LINE L1 0 7644 7421 8 966 282 125 0 0 chrX 49977056 49977104 -116673192 + (TA)n Simple_repeat Simple_repeat 1 48 0 8 966 740 188 279 22 chrX 49977104 49977210 -116673086 - Lx9 LINE L1 -224 7420 7303 8 966 696 269 0 22 chrX 49977228 49977365 -116672931 + B3A SINE B2 1 134 -64 8 966 616 72 0 0 chrX 49977373 49977456 -116672840 - RLTR24 LTR ERV1 -439 90 8 8 966 180 0 0 0 chrX 49978924 49978944 -116671352 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8 966 431 244 0 0 chrX 49978962 49979040 -116671256 + ID4_ SINE ID 4 81 -2 8 966 351 65 0 0 chrX 49980304 49980350 -116669946 + (GA)n Simple_repeat Simple_repeat 1 46 0 8 966 582 114 0 0 chrX 49980415 49980503 -116669793 + (TG)n Simple_repeat Simple_repeat 1 88 0 8 966 521 82 0 0 chrX 49981583 49981656 -116668640 + BC1_Mm scRNA scRNA 1 73 -79 8 966 289 21 0 77 chrX 49981656 49981708 -116668588 + (CAGAGA)n Simple_repeat Simple_repeat 1 48 0 8 966 181 313 29 15 chrX 49982108 49982176 -116668120 - L3b LINE CR1 -89 393 325 8 966 185 0 40 0 chrX 49982339 49982364 -116667932 + (CAA)n Simple_repeat Simple_repeat 2 27 0 8 966 197 244 44 0 chrX 49982475 49982520 -116667776 + L4 LINE RTE 1789 1835 -194 8 966 471 100 0 0 chrX 49982530 49982600 -116667696 + (TG)n Simple_repeat Simple_repeat 2 71 0 8 966 275 283 81 0 chrX 49982698 49982797 -116667499 - U6 snRNA snRNA 0 107 1 8 966 333 0 0 0 chrX 49983185 49983222 -116667074 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 966 326 264 128 60 chrX 49983403 49983520 -116666776 - PB1 SINE Alu -2 125 1 8 966 486 0 0 0 chrX 49984030 49984084 -116666212 + (GA)n Simple_repeat Simple_repeat 1 54 0 8 966 326 214 12 0 chrX 49984295 49984379 -116665917 + GA-rich Low_complexity Low_complexity 2 86 0 8 966 194 306 94 0 chrX 49984618 49984703 -116665593 - MIRm SINE MIR 0 276 184 8 966 276 281 19 46 chrX 49986163 49986271 -116664025 - L2a LINE L2 -40 3386 3282 8 966 531 269 103 126 chrX 49986419 49986652 -116663644 + L1MB3 LINE L1 5598 5819 -364 8 966 524 255 45 19 chrX 49986652 49986808 -116663488 + RSINE1 SINE B4 2 161 -4 8 966 531 269 103 126 chrX 49986808 49986884 -116663412 + L1MB3 LINE L1 5820 5891 -292 8 966 243 0 0 0 chrX 49986884 49986911 -116663385 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 8 966 531 269 103 126 chrX 49986911 49987068 -116663228 + L1MB3 LINE L1 5892 6054 -129 8 966 1056 221 26 0 chrX 49987534 49987729 -116662567 - B3 SINE B2 -16 200 1 8 966 227 31 31 0 chrX 49987924 49987956 -116662340 + (CCCA)n Simple_repeat Simple_repeat 1 33 0 8 966 529 233 56 63 chrX 49987961 49988103 -116662193 - B1F SINE Alu -8 141 1 8 966 766 271 60 55 chrX 49988399 49988746 -116661550 + MamRep434 DNA TcMar 78 426 0 8 966 1277 219 137 42 chrX 49989070 49989480 -116660816 + L1MA9 LINE L1 5644 6092 -220 8 966 403 30 5 2 chrX 49990259 49990321 -116659975 - L1_Mus2 LINE L1 -142 6440 6377 8 966 376 278 240 0 chrX 49990333 49990547 -116659749 - Lx8 LINE L1 -180 5976 5709 9 966 201 371 111 20 chrX 49990909 49991008 -116659288 + L2b LINE L2 3247 3354 -21 9 966 1320 229 68 9 chrX 49991100 49991422 -116658874 + LTR90A LTR LTR 636 976 0 9 966 323 326 0 0 chrX 49992077 49992189 -116658107 - MIRb SINE MIR -16 252 137 9 966 802 293 38 14 chrX 49992256 49992467 -116657829 - ID_B1 SINE B4 0 224 9 9 966 786 200 0 7 chrX 49992482 49992618 -116657678 - ID_B1 SINE B4 0 224 90 9 966 319 324 0 65 chrX 49992487 49992642 -116657654 + YREP_Mm Unknown Unknown 182 326 -1486 9 966 506 229 82 9 chrX 49992732 49992842 -116657454 + PB1D9 SINE Alu 2 119 -1 9 966 1416 106 0 26 chrX 49992996 49993190 -116657106 - B2_Mm2 SINE B2 -6 189 1 9 966 194 321 0 0 chrX 49993560 49993613 -116656683 - MIRm SINE MIR -2 274 222 9 966 847 291 78 4 chrX 49993757 49994002 -116656294 - LTR33 LTR ERVL -212 303 41 9 966 228 213 0 0 chrX 49994263 49994324 -116655972 + (ATG)n Simple_repeat Simple_repeat 2 62 0 9 966 241 214 55 41 chrX 49995089 49995162 -116655134 + L2b LINE L2 3302 3375 0 9 966 382 335 102 29 chrX 49996185 49996459 -116653837 - L2c LINE L2 -33 3354 3061 9 966 687 304 35 25 chrX 49996523 49996722 -116653574 - MER20 DNA MER1_type -17 202 2 9 966 283 367 25 78 chrX 49996742 49997061 -116653235 - L2c LINE L2 -461 2958 2657 9 966 203 331 148 27 chrX 49997444 49997627 -116652669 - L2c LINE L2 -1 3386 3182 9 966 497 304 153 22 chrX 49997774 49998054 -116652242 + LTR16B2 LTR ERVL 92 416 -64 9 966 198 323 116 39 chrX 49998147 49998276 -116652020 + MIRb SINE MIR 115 253 -15 9 966 283 311 68 0 chrX 49998960 49999063 -116651233 + MIRb SINE MIR 50 159 -109 9 966 827 169 233 23 chrX 49999280 49999294 -116651002 - B3 SINE B2 -3 213 202 9 966 203 0 0 36 chrX 49999294 49999322 -116650974 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 9 966 827 169 233 23 chrX 49999322 49999483 -116650813 - B3 SINE B2 -15 201 1 9 966 508 312 29 0 chrX 49999512 49999650 -116650646 + RSINE1 SINE B4 3 144 -21 9 966 698 265 0 18 chrX 49999760 49999925 -116650371 + B3A SINE B2 37 198 0 9 966 558 229 0 0 chrX 50000123 50000228 -116650068 - ID_B1 SINE B4 -5 219 115 1 966 310 279 0 0 chrX 50000237 50000298 -116649998 - ID4_ SINE ID -2 81 21 2 966 219 286 119 21 chrX 50000323 50000464 -116649832 + L2a LINE L2 3271 3407 -19 3 966 280 291 66 33 chrX 50000740 50000861 -116649435 - MER103 DNA DNA -1 165 41 4 966 1160 177 27 9 chrX 50001461 50001683 -116648613 + URR1A DNA MER1_type 1 226 0 5 966 481 282 70 12 chrX 50001712 50001884 -116648412 + MIR SINE MIR 41 222 -40 6 966 371 275 146 0 chrX 50002028 50002199 -116648097 - L1MB8 LINE L1 -186 5992 5797 7 966 190 300 69 86 chrX 50002605 50002780 -116647516 + MIR3 SINE MIR 20 191 -17 8 966 350 350 83 6 chrX 50003376 50003557 -116646739 - MIR SINE MIR -20 242 48 9 966 488 16 0 16 chrX 50003813 50003875 -116646421 + (TTC)n Simple_repeat Simple_repeat 3 63 0 1 966 297 0 0 0 chrX 50003875 50003908 -116646388 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 966 614 169 22 75 chrX 50003908 50004042 -116646254 - B1_Mur4 SINE Alu -21 129 3 1 966 508 242 129 0 chrX 50004094 50004218 -116646078 + RSINE1 SINE B4 2 141 -24 1 966 378 0 0 0 chrX 50004248 50004290 -116646006 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 966 244 243 13 79 chrX 50004409 50004485 -116645811 + tRNA-Ala-GCY_ tRNA tRNA 1 71 -4 1 966 359 278 75 18 chrX 50005620 50005898 -116644398 + L1M5 LINE L1 3085 3378 -2768 1 966 571 252 0 0 chrX 50006219 50006322 -116643974 + RSINE1 SINE B4 31 133 -32 1 966 318 276 53 0 chrX 50006332 50006408 -116643888 + B3 SINE B2 103 182 -34 1 966 1312 81 26 26 chrX 50006466 50006656 -116643640 - B2_Mm2 SINE B2 -5 190 1 1 966 817 220 119 5 chrX 50006858 50007059 -116643237 + ID_B1 SINE B4 1 224 0 2 966 405 0 0 0 chrX 50007522 50007567 -116642729 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 2 966 180 0 0 0 chrX 50008031 50008051 -116642245 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 966 316 259 224 46 chrX 50008101 50008275 -116642021 + MIR SINE MIR 4 208 -54 2 966 654 234 22 0 chrX 50008937 50009074 -116641222 - B1_Mur1 SINE Alu -8 141 2 2 966 305 296 0 0 chrX 50009168 50009249 -116641047 + ID4 SINE ID 3 83 0 2 966 538 309 8 0 chrX 50009281 50009404 -116640892 + B1F2 SINE Alu 24 147 -2 2 966 1205 189 0 15 chrX 50009517 50009721 -116640575 + B3 SINE B2 16 216 0 2 966 449 288 109 7 chrX 50009842 50009989 -116640307 + RSINE1 SINE B4 2 163 -2 2 966 811 28 19 0 chrX 50010038 50010144 -116640152 + (GA)n Simple_repeat Simple_repeat 1 108 0 2 966 327 239 108 63 chrX 50010394 50010528 -116639768 + L2a LINE L2 3237 3421 -5 3 966 231 146 0 0 chrX 50010552 50010593 -116639703 + (CATG)n Simple_repeat Simple_repeat 3 43 0 3 966 202 200 0 0 chrX 50010593 50010628 -116639668 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 3 966 983 276 5 0 chrX 50010628 50010849 -116639447 - ID_B1 SINE B4 -1 223 2 3 966 430 219 8 3 chrX 50010942 50011079 -116639217 - Lx2B LINE L1 -329 6671 6574 3 966 265 211 24 84 chrX 50011378 50011461 -116638835 + MTEa LTR MaLR 288 365 -14 3 966 737 219 7 7 chrX 50011532 50011679 -116638617 - B1_Mus2 SINE Alu 0 147 1 3 966 233 284 187 72 chrX 50011787 50012049 -116638247 - MLT1L LTR MaLR -176 434 143 3 966 379 266 0 0 chrX 50012136 50012215 -116638081 + ID4_ SINE ID 2 80 -3 3 966 821 298 16 59 chrX 50012240 50012543 -116637753 + B4A SINE B4 1 290 -2 3 966 922 220 14 28 chrX 50012723 50012938 -116637358 + B3 SINE B2 5 216 0 4 966 640 151 16 48 chrX 50013930 50014055 -116636241 + B1_Mur3 SINE Alu 27 147 -2 4 966 1466 189 99 26 chrX 50014425 50014768 -116635528 - ORR1D1 LTR MaLR 0 374 7 4 966 1160 44 0 0 chrX 50014960 50015096 -116635200 + B1_Mus1 SINE Alu 1 136 -12 4 966 231 36 0 0 chrX 50015096 50015124 -116635172 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 4 966 423 303 81 8 chrX 50015185 50015308 -116634988 + B1F2 SINE Alu 10 141 -8 4 966 263 329 0 89 chrX 50015312 50015402 -116634894 + ID4_ SINE ID 2 83 0 4 966 562 242 30 1 chrX 50016750 50016905 -116633391 - MER5A1 DNA MER1_type -1 188 9 4 966 1030 274 101 14 chrX 50017126 50017544 -116632752 - L1MB7 LINE L1 -2 6182 5729 4 966 355 226 128 0 chrX 50017775 50017877 -116632419 - PB1D9 SINE Alu -5 115 1 4 966 1164 41 0 33 chrX 50017905 50018056 -116632240 - B1_Mm SINE Alu 0 147 2 5 966 203 122 20 0 chrX 50018316 50018365 -116631931 + (TTTTTG)n Simple_repeat Simple_repeat 6 55 0 5 966 320 282 79 87 chrX 50018441 50018719 -116631577 + MLT1E1 LTR MaLR 7 321 -359 5 966 405 367 33 54 chrX 50018765 50019007 -116631289 + MLT1E1 LTR MaLR 416 652 -2 5 966 853 298 87 35 chrX 50019074 50019418 -116630878 + MLT1A1 LTR MaLR 5 366 -42 5 966 321 169 0 0 chrX 50019423 50019482 -116630814 + T-rich Low_complexity Low_complexity 1 59 0 5 966 1237 41 0 0 chrX 50019485 50019631 -116630665 - B1_Mm SINE Alu 0 147 2 5 966 704 281 64 15 chrX 50020015 50020217 -116630079 - ID_B1 SINE B4 -7 217 6 5 966 202 181 91 14 chrX 50020244 50020313 -116629983 - MIR SINE MIR -8 260 182 5 966 1022 253 13 78 chrX 50020346 50020726 -116629570 - L1ME1 LINE L1 -7 6172 5817 5 966 279 225 12 0 chrX 50020728 50020808 -116629488 - L1MB7 LINE L1 -10 6174 6094 5 966 401 116 14 0 chrX 50020856 50020925 -116629371 - L1ME1 LINE L1 -350 5829 5760 6 966 242 386 64 25 chrX 50020925 50021082 -116629214 - MIR SINE MIR -99 163 1 6 966 764 108 0 8 chrX 50021253 50021375 -116628921 + (GAAA)n Simple_repeat Simple_repeat 2 122 0 6 966 290 314 150 45 chrX 50021750 50021997 -116628299 + L3b LINE CR1 117 389 -93 6 966 770 196 0 20 chrX 50022559 50022710 -116627586 - B1_Mur4 SINE Alu -2 148 1 6 966 315 262 67 83 chrX 50022828 50022867 -116627429 + L1ME2z LINE L1 5631 5668 -776 6 966 2235 136 82 8 chrX 50022867 50023259 -116627037 - MTC LTR MaLR 0 421 1 6 966 315 262 67 83 chrX 50023259 50023473 -116626823 + L1ME2z LINE L1 5669 5880 -564 6 966 1284 258 116 21 chrX 50023530 50023867 -116626429 - MTD LTR MaLR 0 419 51 6 966 378 0 0 0 chrX 50023915 50023957 -116626339 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 966 400 234 129 14 chrX 50023957 50024096 -116626200 + L1MA6 LINE L1 4785 4939 -1204 6 966 516 222 110 8 chrX 50024135 50024253 -116626043 + RSINE1 SINE B4 4 133 -32 7 966 647 280 91 11 chrX 50024290 50024554 -116625742 + L1MA6 LINE L1 4979 5263 -880 6 966 481 204 48 19 chrX 50024590 50024695 -116625601 - MTE2b LTR MaLR -189 190 83 7 966 860 104 130 14 chrX 50024701 50024836 -116625460 - RMER4B LTR ERVK 0 585 433 7 966 369 0 0 0 chrX 50024836 50024877 -116625419 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 966 363 211 6 6 chrX 50024976 50025073 -116625223 + L1M4 LINE L1 5336 5432 -810 7 966 1067 239 28 132 chrX 50025095 50025321 -116624975 + MTE2b LTR MaLR 95 314 -65 7 966 678 25 0 0 chrX 50025321 50025401 -116624895 + (GAAA)n Simple_repeat Simple_repeat 2 81 0 7 966 1067 239 28 132 chrX 50025401 50025492 -116624804 + MTE2b LTR MaLR 315 379 0 7 966 1588 32 16 0 chrX 50025858 50026047 -116624249 + B2_Mm1t SINE B2 2 193 0 7 966 562 223 86 11 chrX 50026295 50026481 -116623815 + L1MA6 LINE L1 5408 5607 -684 6 966 601 266 56 8 chrX 50026482 50026607 -116623689 + RSINE1 SINE B4 4 134 -31 7 966 354 80 0 0 chrX 50026609 50026659 -116623637 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 966 387 0 0 0 chrX 50026659 50026701 -116623595 + (GA)n Simple_repeat Simple_repeat 2 44 0 8 966 1468 277 91 15 chrX 50026701 50026838 -116623458 + L1MA6 LINE L1 5598 5761 -539 6 966 2404 125 7 97 chrX 50026838 50027271 -116623025 + ORR1B1 LTR MaLR 1 394 0 8 966 1468 277 91 15 chrX 50027271 50027781 -116622515 + L1MA6 LINE L1 5762 6294 -6 6 966 601 301 0 7 chrX 50028271 50028418 -116621878 + ID_B1 SINE B4 79 224 0 8 966 441 301 48 72 chrX 50028672 50028965 -116621331 - L1M4c LINE L1 -4600 1784 1499 8 966 243 286 0 0 chrX 50029135 50029184 -116621112 + (CGA)n Simple_repeat Simple_repeat 3 51 0 8 966 1542 154 37 67 chrX 50029282 50029737 -116620559 - RMER17C LTR ERVK -519 439 16 8 966 216 116 0 65 chrX 50029820 50029837 -116620459 + A-rich Low_complexity Low_complexity 1 15 0 8 966 1173 55 7 0 chrX 50029837 50029982 -116620314 + B1_Mm SINE Alu 2 147 0 8 966 216 116 0 65 chrX 50029982 50030010 -116620286 + A-rich Low_complexity Low_complexity 16 43 0 8 966 291 354 31 8 chrX 50030170 50030298 -116619998 - B4A SINE B4 -68 224 94 8 966 709 279 112 31 chrX 50030261 50030319 -116619977 + MLT1A0 LTR MaLR 82 146 -219 9 966 306 0 0 0 chrX 50030319 50030353 -116619943 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 9 966 709 279 112 31 chrX 50030353 50030553 -116619743 + MLT1A0 LTR MaLR 147 361 -4 9 966 431 328 23 0 chrX 50030561 50030689 -116619607 + MLT1A0 LTR MaLR 333 463 -4 9 966 237 268 0 0 chrX 50030693 50030764 -116619532 + L1MD3 LINE L1 7741 7811 -184 9 966 384 203 14 0 chrX 50030887 50030956 -116619340 - ID4_ SINE ID -11 72 3 9 966 308 278 18 18 chrX 50031182 50031292 -116619004 - L1MA4 LINE L1 -370 5930 5821 9 966 410 198 31 20 chrX 50031325 50031423 -116618873 - PB1D10 SINE Alu -9 108 10 9 966 189 0 0 0 chrX 50031438 50031459 -116618837 + (T)n Simple_repeat Simple_repeat 1 21 0 9 966 466 293 0 8 chrX 50031942 50032059 -116618237 + ID_B1 SINE B4 84 199 -25 9 966 961 220 138 52 chrX 50032851 50033027 -116617269 - B4A SINE B4 0 292 91 9 966 2073 168 92 96 chrX 50033027 50033560 -116616736 - MT2A LTR ERVL 0 533 3 9 966 961 220 138 52 chrX 50033560 50033652 -116616644 - B4A SINE B4 -202 90 1 9 966 836 131 66 0 chrX 50034107 50034244 -116616052 - B1_Mur4 SINE Alu 0 150 5 1 966 295 186 17 0 chrX 50034278 50034337 -116615959 + L1M3 LINE L1 5413 5472 -699 1 966 390 245 344 0 chrX 50034348 50034560 -116615736 + B4 SINE B4 2 286 -6 1 966 390 74 0 0 chrX 50034584 50034638 -116615658 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 966 232 239 183 0 chrX 50034679 50034750 -116615546 + MTEa LTR MaLR 172 255 -124 1 966 807 298 28 31 chrX 50034767 50035055 -116615241 - B4A SINE B4 -4 288 2 1 966 913 257 88 35 chrX 50035101 50035533 -116614763 - L1MB4 LINE L1 -56 6124 5672 1 966 1532 209 19 6 chrX 50035533 50035846 -116614450 - MTD LTR MaLR -102 317 1 1 966 630 299 60 13 chrX 50035862 50036356 -116613940 - L1MB4 LINE L1 -544 5630 5115 1 966 393 244 118 33 chrX 50036606 50036894 -116613402 + L1MA5 LINE L1 5964 6298 -2 1 966 650 306 110 55 chrX 50036967 50037386 -116612910 - Cheshire DNA MER1_type -10 2410 1969 1 966 444 246 58 23 chrX 50037386 50037557 -116612739 - L1MB8 LINE L1 -98 6080 5904 1 966 792 202 30 0 chrX 50037569 50037737 -116612559 - Cheshire DNA MER1_type -393 2027 1855 1 966 2618 263 49 7 chrX 50037731 50038471 -116611825 - Cheshire DNA MER1_type -929 1491 721 1 966 567 85 0 0 chrX 50038493 50038575 -116611721 + (TG)n Simple_repeat Simple_repeat 1 82 0 1 966 353 345 19 39 chrX 50038602 50038756 -116611540 - Cheshire DNA MER1_type -2029 391 241 1 966 262 253 99 0 chrX 50038767 50038858 -116611438 - Cheshire DNA MER1_type -2242 178 79 1 966 485 275 50 8 chrX 50038858 50038979 -116611317 + RSINE1 SINE B4 2 127 -38 1 966 596 197 67 52 chrX 50039200 50039334 -116610962 + B1_Mur2 SINE Alu 1 136 -13 1 966 213 235 0 19 chrX 50039338 50039355 -116610941 + polypurine Low_complexity Low_complexity 4 20 0 1 966 1369 94 5 0 chrX 50039355 50039546 -116610750 + B2_Mm2 SINE B2 3 194 -1 1 966 213 235 0 19 chrX 50039546 50039580 -116610716 + polypurine Low_complexity Low_complexity 21 54 0 1 966 2364 36 39 7 chrX 50039625 50039933 -116610363 + L1Md_F3 LINE L1 6267 6584 0 1 966 269 170 43 0 chrX 50039995 50040042 -116610254 - RSINE1 SINE B4 -36 129 81 1 966 225 0 0 0 chrX 50041489 50041514 -116608782 + (A)n Simple_repeat Simple_repeat 1 25 0 1 966 424 309 77 50 chrX 50041924 50042247 -116608049 - L1MB2 LINE L1 -27 6144 5813 1 966 439 255 75 88 chrX 50042383 50042611 -116607685 + RMER15 LTR ERVL 27 251 -324 1 966 447 226 56 42 chrX 50042475 50042618 -116607678 + ID_B1 SINE B4 67 211 -13 1 966 750 116 24 16 chrX 50042507 50042630 -116607666 + B1_Mus1 SINE Alu 23 146 -2 1 966 2064 167 14 141 chrX 50042644 50043146 -116607150 + RMER15 LTR ERVL 138 575 0 1 966 891 283 68 39 chrX 50043377 50043617 -116606679 - L1MB8 LINE L1 0 6178 5945 1 966 1603 47 0 0 chrX 50043617 50043807 -116606489 - B2_Mm1t SINE B2 -3 190 1 1 966 891 283 68 39 chrX 50043807 50044048 -116606248 - L1MB8 LINE L1 -234 5944 5683 1 966 1039 252 148 13 chrX 50044175 50044480 -116605816 - ORR1E LTR MaLR -5 354 9 1 966 347 270 58 0 chrX 50044628 50044762 -116605534 - L1MB7 LINE L1 -348 5826 5686 1 966 312 48 0 0 chrX 50044803 50044845 -116605451 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 966 737 271 88 22 chrX 50044851 50045032 -116605264 - B4 SINE B4 -18 274 82 1 966 948 226 60 5 chrX 50045046 50045246 -116605050 - B3 SINE B2 0 216 6 1 966 344 320 10 3 chrX 50045251 50045347 -116604949 - B4A SINE B4 -194 98 5 1 966 973 246 80 4 chrX 50045385 50045811 -116604485 - L1MB7 LINE L1 -531 5647 5174 1 966 634 288 0 0 chrX 50045818 50045964 -116604332 - B1F SINE Alu 0 149 4 1 966 1093 266 102 0 chrX 50046148 50046453 -116603843 - MTE2b LTR MaLR -43 336 1 1 966 390 91 0 0 chrX 50047251 50047306 -116602990 + (CATA)n Simple_repeat Simple_repeat 4 58 0 1 966 387 0 0 0 chrX 50047306 50047348 -116602948 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 966 315 254 126 8 chrX 50047924 50048051 -116602245 - L1MB7 LINE L1 -16 6168 6027 1 966 1265 88 50 0 chrX 50048074 50048256 -116602040 - B2_Mm2 SINE B2 -3 192 2 1 966 282 227 13 0 chrX 50048256 50048331 -116601965 - L1MB7 LINE L1 -223 5955 5880 1 966 360 0 0 0 chrX 50048363 50048403 -116601893 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 966 351 0 0 0 chrX 50048403 50048441 -116601855 + (GA)n Simple_repeat Simple_repeat 1 39 0 1 966 943 250 43 25 chrX 50048495 50048774 -116601522 - B4A SINE B4 -8 284 1 1 966 292 292 30 40 chrX 50049306 50049406 -116600890 + MTEa LTR MaLR 256 354 -25 1 966 378 0 0 0 chrX 50049655 50049697 -116600599 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 966 275 308 122 14 chrX 50049953 50050101 -116600195 + RMER15 LTR ERVL 347 510 -65 1 966 578 311 107 67 chrX 50050121 50050916 -116599380 - L1MC4 LINE L1 -51 7991 7165 1 966 379 224 59 0 chrX 50050963 50051048 -116599248 - PB1D10 SINE Alu -23 94 5 1 966 668 276 46 23 chrX 50051500 50051719 -116598577 + MER2 DNA MER2_type 1 224 -121 1 966 265 336 14 72 chrX 50051733 50051871 -116598425 + ID_B1 SINE B4 95 224 0 1 966 388 307 52 66 chrX 50051875 50052011 -116598285 + MER2 DNA MER2_type 212 345 0 1 966 744 211 129 16 chrX 50052062 50052255 -116598041 - B3 SINE B2 0 216 2 1 966 331 196 69 0 chrX 50052618 50052720 -116597576 - MER96B DNA hAT -73 344 236 1 966 755 220 11 56 chrX 50052980 50053158 -116597138 - RLTR20D LTR ERVK -363 205 36 1 966 699 75 0 0 chrX 50053204 50053298 -116596998 - B1_Mm SINE Alu -52 95 2 1 966 256 319 0 0 chrX 50054234 50054303 -116595993 + PB1D10 SINE Alu 43 111 -6 1 966 391 258 8 205 chrX 50054313 50054435 -116595861 + B1F SINE Alu 18 136 -13 1 966 1729 155 26 45 chrX 50054441 50054751 -116595545 + ORR1B1 LTR MaLR 49 352 -42 1 966 264 283 44 62 chrX 50054752 50054865 -116595431 + Lx4B LINE L1 6902 7012 -46 1 966 261 312 12 0 chrX 50054906 50054986 -116595310 + ID4_ SINE ID 2 82 -1 1 966 377 369 143 7 chrX 50055058 50055366 -116594930 - L3 LINE CR1 -72 4417 4068 1 966 827 286 66 0 chrX 50055592 50055865 -116594431 - B4A SINE B4 0 292 2 1 966 215 269 142 24 chrX 50055867 50056005 -116594291 - MIR SINE MIR -67 201 48 1 966 670 308 5 15 chrX 50056511 50056709 -116593587 - B3A SINE B2 0 198 3 1 966 729 252 121 25 chrX 50056712 50056911 -116593385 - ID_B1 SINE B4 -4 220 3 1 966 465 365 105 31 chrX 50057315 50057640 -116592656 - MLT1L LTR MaLR -202 408 60 1 966 730 213 162 11 chrX 50057642 50057827 -116592469 + B3 SINE B2 2 214 -2 1 966 706 189 230 17 chrX 50059219 50059397 -116590899 + B3 SINE B2 1 216 0 1 966 1314 70 35 84 chrX 50059679 50059881 -116590415 + B2_Mm2 SINE B2 2 193 -2 1 966 464 197 12 144 chrX 50059888 50060048 -116590248 + MT2B LTR ERVL 138 276 -325 1 966 867 168 0 7 chrX 50059931 50060075 -116590221 + B1_Mus1 SINE Alu 6 148 0 1 966 892 172 154 11 chrX 50060679 50060861 -116589435 - B3 SINE B2 -7 209 2 1 966 794 81 0 9 chrX 50061048 50061160 -116589136 + Lx LINE L1 6537 6647 -7 1 966 309 240 88 68 chrX 50061352 50061565 -116588731 - L1ME3B LINE L1 -236 6004 5788 1 966 302 366 89 24 chrX 50062471 50062639 -116587657 + L2b LINE L2 3182 3360 -15 1 966 996 115 49 35 chrX 50062654 50062798 -116587498 + B1_Mus1 SINE Alu 2 147 -1 1 966 486 120 0 0 chrX 50062806 50062881 -116587415 + (GGGA)n Simple_repeat Simple_repeat 4 78 0 1 966 1196 213 5 0 chrX 50062953 50063155 -116587141 + B3 SINE B2 1 203 -13 1 966 1351 118 0 11 chrX 50063414 50063602 -116586694 + B2_Mm2 SINE B2 2 187 -8 1 966 347 228 144 2 chrX 50063633 50063769 -116586527 + L1MA10 LINE L1 6168 6333 -1 1 966 211 317 158 31 chrX 50063900 50063919 -116586377 - B4 SINE B4 -69 223 124 1 966 270 330 147 20 chrX 50063919 50064021 -116586275 - B1F1 SINE Alu -33 116 2 1 966 1420 181 158 8 chrX 50064074 50064409 -116585887 + ORR1D1 LTR MaLR 8 374 0 1 966 657 98 0 26 chrX 50064488 50064583 -116585713 + (TTTTC)n Simple_repeat Simple_repeat 5 99 0 1 966 1074 144 0 0 chrX 50064583 50064763 -116585533 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 966 657 98 0 26 chrX 50064763 50064782 -116585514 + (TTTTC)n Simple_repeat Simple_repeat 3 19 0 1 966 194 236 54 18 chrX 50066297 50066353 -116583943 + MIRc SINE MIR 113 170 -92 1 966 370 326 22 15 chrX 50066501 50066635 -116583661 - MIR SINE MIR -105 157 23 1 966 786 255 133 19 chrX 50066690 50066954 -116583342 - MLT1A0 LTR MaLR 0 365 72 1 966 2117 174 25 71 chrX 50066967 50067363 -116582933 - ORR1C1 LTR MaLR 0 378 1 1 966 638 219 17 0 chrX 50067660 50067779 -116582517 - B1_Mur1 SINE Alu 0 149 29 1 966 418 324 55 55 chrX 50067779 50067859 -116582437 - ID_B1 SINE B4 0 224 26 1 966 371 280 56 0 chrX 50067845 50067952 -116582344 - MLT1A0 LTR MaLR -15 359 247 1 966 342 280 76 0 chrX 50068074 50068206 -116582090 - L1MA6 LINE L1 -18 6282 6141 1 966 556 243 19 39 chrX 50068317 50068471 -116581825 - MLT1A0 LTR MaLR -214 151 1 1 966 928 154 7 0 chrX 50068595 50068731 -116581565 + B1_Mur3 SINE Alu 5 141 -8 1 966 886 152 20 7 chrX 50068741 50068893 -116581403 + B2_Mm2 SINE B2 16 169 -26 1 966 866 81 0 8 chrX 50068896 50069021 -116581275 + (GAAA)n Simple_repeat Simple_repeat 1 124 0 1 966 804 196 0 25 chrX 50069158 50069315 -116580981 + B3 SINE B2 5 157 -59 1 966 210 356 68 11 chrX 50069343 50069431 -116580865 - MIRm SINE MIR -25 251 159 1 120 907 297 38 81 chrX 50069460 50069830 -116580466 - ORR1E LTR MaLR 0 359 6 1 967 733 155 17 8 chrX 50069844 50069961 -116580335 + PB1D9 SINE Alu 1 118 -2 1 967 1427 76 11 16 chrX 50070253 50070440 -116579856 - B2_Mm1t SINE B2 -6 187 2 1 967 459 266 78 0 chrX 50070454 50070608 -116579688 + MER53 DNA hAT 8 173 -20 1 967 484 301 37 118 chrX 50071961 50072232 -116578064 - ORR1E LTR MaLR -13 346 98 2 967 304 358 66 6 chrX 50072393 50072559 -116577737 + MIR SINE MIR 49 224 -38 2 967 210 316 34 69 chrX 50073011 50073215 -116577081 + L2 LINE L2 1339 1535 -1884 2 967 238 311 147 29 chrX 50073227 50073363 -116576933 + L2 LINE L2 2018 2169 -1250 2 967 943 250 195 102 chrX 50073367 50073879 -116576417 + RMER15 LTR ERVL 16 575 0 2 967 206 162 27 0 chrX 50073946 50073983 -116576313 + L2 LINE L2 2340 2377 -1042 2 967 408 279 7 55 chrX 50073993 50074179 -116576117 - MLT1B LTR MaLR -18 449 193 2 967 194 222 19 0 chrX 50074208 50074262 -116576034 + CT-rich Low_complexity Low_complexity 1 55 0 2 967 218 389 0 0 chrX 50074266 50074338 -116575958 - B1F SINE Alu -7 142 71 2 967 243 208 173 61 chrX 50074389 50074517 -116575779 + RMER21B LTR ERV1 323 398 -444 2 967 268 235 110 20 chrX 50074607 50074707 -116575589 + RMER21B LTR ERV1 402 510 -332 2 967 950 189 16 22 chrX 50074802 50074986 -116575310 + B3 SINE B2 12 194 -22 2 967 237 314 68 130 chrX 50075156 50075345 -116574951 + L2 LINE L2 2458 2628 -791 2 967 1240 55 7 0 chrX 50075345 50075491 -116574805 - B1_Mm SINE Alu 0 147 1 2 967 237 314 68 130 chrX 50075491 50075594 -116574702 + L2 LINE L2 2629 2732 -687 2 967 276 222 0 0 chrX 50075594 50075648 -116574648 + MLT2B5 LTR ERVL 1 54 -663 2 967 555 293 21 47 chrX 50075658 50075848 -116574448 + B3A SINE B2 8 192 -6 2 967 227 228 0 186 chrX 50075850 50075920 -116574376 + MTEa LTR MaLR 36 92 -287 2 967 1485 313 47 26 chrX 50076314 50076885 -116573411 + MTE-int LTR MaLR 1 583 -997 2 967 8086 124 13 55 chrX 50076949 50077206 -116573090 - L1_Mur2 LINE L1 -559 5318 5132 2 967 1330 34 0 0 chrX 50077206 50077353 -116572943 - B1_Mus2 SINE Alu 0 147 1 2 967 8086 124 13 55 chrX 50077353 50078484 -116571812 - L1_Mur2 LINE L1 -746 5131 3988 2 967 9096 123 26 14 chrX 50078484 50079433 -116570863 + Lx2A LINE L1 5397 6335 -673 2 967 1494 83 15 15 chrX 50079433 50079628 -116570668 - B2_Mm2 SINE B2 0 195 1 2 967 9096 120 32 17 chrX 50079628 50080269 -116570027 + Lx2A LINE L1 6336 7008 0 2 967 256 362 160 34 chrX 50080281 50080487 -116569809 + B4 SINE B4 50 281 -11 2 967 396 250 10 20 chrX 50080736 50080838 -116569458 + MTEa LTR MaLR 276 376 -3 2 967 2644 51 0 0 chrX 50080926 50081239 -116569057 + L1Md_F2 LINE L1 6265 6577 -5 2 967 1564 70 5 0 chrX 50081334 50081520 -116568776 + B2_Mm1t SINE B2 1 187 -6 2 967 211 125 20 59 chrX 50081553 50081604 -116568692 + L2 LINE L2 2844 2892 -527 2 967 188 268 54 0 chrX 50081635 50081691 -116568605 + L2a LINE L2 3289 3347 -79 2 967 22 80 0 0 chrX 50081723 50081773 -116568523 + AT_rich Low_complexity Low_complexity 1 50 0 2 967 589 252 84 28 chrX 50081884 50082027 -116568269 + B3A SINE B2 1 151 -47 2 967 228 175 112 36 chrX 50082162 50082223 -116568073 - B1F1 SINE Alu -51 66 1 2 967 386 107 14 25 chrX 50082293 50082409 -116567887 - B2_Mm2 SINE B2 -1 194 47 2 967 279 89 22 0 chrX 50082435 50082480 -116567816 - B2_Mm1t SINE B2 -14 179 134 2 967 4544 64 21 3 chrX 50082493 50083061 -116567235 - L1_Mus2 LINE L1 -1 6565 5988 2 967 5904 62 12 0 chrX 50083061 50083976 -116566320 + L1_Mus2 LINE L1 5074 6003 -563 2 967 1022 103 7 0 chrX 50083976 50084121 -116566175 - B2_Mm1t SINE B2 -47 146 1 2 967 2942 127 93 7 chrX 50084280 50084929 -116565367 + RMER6A LTR ERVK 3 744 -12 2 967 429 76 0 0 chrX 50084931 50084997 -116565299 + (TC)n Simple_repeat Simple_repeat 1 66 0 2 967 456 19 0 0 chrX 50084997 50085050 -116565246 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 967 955 129 233 28 chrX 50085050 50085376 -116564920 - RMER6B LTR ERVK -68 393 1 2 967 326 275 12 24 chrX 50085500 50085582 -116564714 + ID4_ SINE ID 2 82 -1 2 967 495 206 11 21 chrX 50085597 50085691 -116564605 + ID_B1 SINE B4 2 94 -130 2 967 572 260 8 27 chrX 50085761 50085974 -116564322 - L1MA4 LINE L1 -432 5868 5668 2 967 841 184 28 0 chrX 50086256 50086397 -116563899 + B1_Mus2 SINE Alu 1 145 -2 2 967 450 200 94 0 chrX 50086487 50086572 -116563724 + ID_B1 SINE B4 105 197 -27 2 967 342 0 0 0 chrX 50086585 50086623 -116563673 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 967 612 0 0 0 chrX 50086669 50086737 -116563559 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 967 3749 15 2 0 chrX 50086737 50087132 -116563164 + MTA_Mm LTR MaLR 1 396 0 2 967 724 147 108 0 chrX 50087464 50087593 -116562703 - B1_Mus1 SINE Alu 0 148 6 2 967 8095 55 2 6 chrX 50087604 50088764 -116561532 - L1Md_F2 LINE L1 0 6582 5430 2 967 1218 63 0 6 chrX 50088768 50088927 -116561369 + B2_Mm2 SINE B2 30 187 -8 2 967 278 303 0 63 chrX 50088938 50089065 -116561231 + Lx8 LINE L1 7346 7464 -9 2 967 1364 97 5 16 chrX 50089359 50089548 -116560748 + B2_Mm1t SINE B2 1 187 -6 2 967 823 157 229 17 chrX 50089549 50089581 -116560715 - B3 SINE B2 -4 212 170 2 967 324 120 0 0 chrX 50089581 50089631 -116560665 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 967 180 0 0 0 chrX 50089631 50089650 -116560646 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 967 823 157 229 17 chrX 50089650 50089791 -116560505 - B3 SINE B2 -47 169 2 2 967 604 284 43 0 chrX 50089896 50090037 -116560259 - RSINE1 SINE B4 -2 163 17 2 967 1158 217 0 19 chrX 50090088 50090295 -116560001 - B3 SINE B2 -10 206 4 2 967 1757 192 94 31 chrX 50090322 50090704 -116559592 + MTD LTR MaLR 14 419 0 2 967 826 170 28 21 chrX 50091480 50091624 -116558672 - B1_Mm SINE Alu -2 145 1 2 967 334 219 0 0 chrX 50092012 50092076 -116558220 - ID4 SINE ID 0 83 20 2 967 478 197 140 66 chrX 50092116 50092252 -116558044 + B1_Mur4 SINE Alu 5 150 0 2 967 236 305 103 19 chrX 50093187 50093294 -116557002 + MER5A DNA MER1_type 7 122 -67 2 967 290 294 125 19 chrX 50093398 50093502 -116556794 + RSINE1 SINE B4 17 131 -34 2 967 501 62 0 0 chrX 50093512 50093577 -116556719 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 2 967 618 299 7 0 chrX 50093600 50093744 -116556552 + B1_Mur4 SINE Alu 5 149 -1 2 967 4483 36 0 4 chrX 50093767 50094271 -116556025 + L1Md_F2 LINE L1 6081 6582 0 2 967 1262 94 72 6 chrX 50094284 50094442 -116555854 + B2_Mm2 SINE B2 3 173 -22 2 967 252 0 0 0 chrX 50094442 50094470 -116555826 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 2 967 1262 94 72 6 chrX 50094470 50094492 -116555804 + B2_Mm2 SINE B2 174 195 0 2 967 21 57 0 0 chrX 50094583 50094618 -116555678 + AT_rich Low_complexity Low_complexity 1 35 0 2 967 1137 58 58 0 chrX 50094625 50094764 -116555532 + B1_Mm SINE Alu 1 147 0 2 967 306 0 0 0 chrX 50100057 50100091 -116550205 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 967 221 0 35 0 chrX 50102171 50102200 -116548096 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 2 967 317 76 0 132 chrX 50102202 50102278 -116548018 - L1Md_F3 LINE L1 -1 6583 6518 2 967 477 0 0 0 chrX 50102794 50102847 -116547449 + (TC)n Simple_repeat Simple_repeat 1 53 0 2 967 232 270 27 13 chrX 50102870 50102945 -116547351 + CT-rich Low_complexity Low_complexity 4 79 0 2 967 234 274 32 0 chrX 50105045 50105107 -116545189 - MIR3 SINE MIR -29 179 116 2 967 576 106 0 0 chrX 50105280 50105365 -116544931 + (T)n Simple_repeat Simple_repeat 1 85 0 2 967 223 270 76 33 chrX 50106896 50106988 -116543308 + MIRc SINE MIR 15 110 -158 2 967 861 174 0 53 chrX 50108594 50108746 -116541550 - B1_Mur1 SINE Alu 0 149 6 2 967 575 185 230 0 chrX 50108798 50108933 -116541363 + B3 SINE B2 1 166 -50 2 967 266 132 19 0 chrX 50108948 50109001 -116541295 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 2 967 319 210 48 0 chrX 50109022 50109084 -116541212 + ID4 SINE ID 3 67 -16 2 967 825 27 27 0 chrX 50109096 50109208 -116541088 + (TAGA)n Simple_repeat Simple_repeat 4 118 0 2 967 268 327 19 0 chrX 50109289 50109393 -116540903 - MER33 DNA MER1_type -202 122 17 2 967 262 229 16 32 chrX 50109613 50109676 -116540620 - MIR SINE MIR -83 179 118 2 967 21 0 0 0 chrX 50109744 50109765 -116540531 + AT_rich Low_complexity Low_complexity 1 21 0 2 967 1293 35 7 0 chrX 50109826 50109971 -116540325 - B1_Mm SINE Alu 0 147 2 2 967 257 255 41 121 chrX 50110185 50110319 -116539977 - MLT1A0 LTR MaLR -248 126 2 2 967 820 62 0 58 chrX 50110655 50110776 -116539520 - B1_Mus1 SINE Alu 0 148 35 2 967 247 93 0 36 chrX 50110834 50110882 -116539414 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 2 967 1770 21 0 10 chrX 50110882 50111077 -116539219 - B2_Mm1a SINE B2 0 193 1 2 967 247 93 0 36 chrX 50111077 50111084 -116539212 + (TTTTG)n Simple_repeat Simple_repeat 3 9 0 2 967 730 38 93 37 chrX 50111095 50111203 -116539093 - B1_Mus1 SINE Alu 0 148 35 2 967 247 93 0 36 chrX 50111261 50111309 -116538987 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 2 967 1770 21 0 10 chrX 50111309 50111504 -116538792 - B2_Mm1a SINE B2 0 193 1 2 967 247 93 0 36 chrX 50111504 50111511 -116538785 + (TTTTG)n Simple_repeat Simple_repeat 3 9 0 2 967 1074 53 75 0 chrX 50111522 50111655 -116538641 - B1_Mus2 SINE Alu 0 147 5 2 967 198 245 20 0 chrX 50111691 50111740 -116538556 - MIR SINE MIR -135 127 78 2 967 345 378 0 26 chrX 50111789 50111903 -116538393 - PB1D10 SINE Alu -6 111 1 2 967 454 319 7 0 chrX 50111925 50112060 -116538236 - B1F SINE Alu 0 149 14 2 967 318 106 0 0 chrX 50112841 50112888 -116537408 + (GAAAA)n Simple_repeat Simple_repeat 3 49 0 2 967 258 32 0 0 chrX 50114085 50114116 -116536180 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 967 1151 103 27 0 chrX 50114642 50114826 -116535470 - B2_Mm2 SINE B2 -1 194 6 2 967 293 185 0 0 chrX 50114822 50114876 -116535420 + tRNA-Asp-GAY tRNA tRNA 1 54 -21 2 967 1188 54 0 13 chrX 50114887 50115036 -116535260 + B1_Mus1 SINE Alu 2 148 0 2 967 31 0 0 0 chrX 50115078 50115109 -116535187 + AT_rich Low_complexity Low_complexity 1 31 0 2 967 245 125 0 0 chrX 50115353 50115393 -116534903 + B3A SINE B2 1 40 -158 2 967 1105 92 110 0 chrX 50115573 50115736 -116534560 + B2_Mm2 SINE B2 1 181 -14 2 967 559 265 108 0 chrX 50115750 50115916 -116534380 + B3 SINE B2 27 210 -6 2 967 346 191 112 41 chrX 50116117 50116215 -116534081 + PB1D10 SINE Alu 3 107 -10 3 967 237 241 17 33 chrX 50116506 50116566 -116533730 + B1F2 SINE Alu 13 71 -78 3 967 1078 118 12 0 chrX 50116586 50116756 -116533540 + B2_Mm1t SINE B2 13 184 -9 3 967 229 296 84 90 chrX 50116796 50116963 -116533333 + L1MC LINE L1 5437 5602 -2280 3 967 545 254 0 0 chrX 50117436 50117546 -116532750 - PB1D9 SINE Alu -8 112 3 3 967 29 28 0 0 chrX 50117596 50117632 -116532664 + AT_rich Low_complexity Low_complexity 1 36 0 3 967 565 306 0 27 chrX 50117656 50117841 -116532455 - B3A SINE B2 -16 182 3 3 967 754 308 9 19 chrX 50118377 50118592 -116531704 - B3 SINE B2 -3 213 1 3 967 359 256 0 35 chrX 50118722 50118807 -116531489 + ID4 SINE ID 1 82 -1 3 967 409 297 76 0 chrX 50118841 50118959 -116531337 + RSINE1 SINE B4 15 141 -24 3 967 760 173 0 21 chrX 50119012 50119154 -116531142 + B1_Mur1 SINE Alu 3 141 -8 3 967 1153 62 7 0 chrX 50121173 50121319 -116528977 - B1_Mus1 SINE Alu 0 148 2 3 967 508 259 30 54 chrX 50121432 50121599 -116528697 + RSINE1 SINE B4 3 165 0 3 967 776 11 11 0 chrX 50122074 50122167 -116528129 + (TTCTC)n Simple_repeat Simple_repeat 2 95 0 3 967 435 106 0 0 chrX 50122182 50122248 -116528048 + (TTTC)n Simple_repeat Simple_repeat 1 66 0 3 967 784 161 73 0 chrX 50122250 50122387 -116527909 - B1_Mus2 SINE Alu 0 147 1 3 967 518 203 22 146 chrX 50122417 50122602 -116527694 + L1MA9 LINE L1 5694 5855 -457 3 967 449 263 44 45 chrX 50122604 50122767 -116527529 - B3A SINE B2 -2 214 53 3 967 1186 75 0 0 chrX 50122801 50122947 -116527349 + B1_Mus2 SINE Alu 1 146 -1 3 967 483 168 0 0 chrX 50122947 50123042 -116527254 + (TA)n Simple_repeat Simple_repeat 2 96 0 3 967 915 101 119 6 chrX 50123042 50123201 -116527095 - B2_Mm2 SINE B2 -18 177 1 3 967 617 218 18 72 chrX 50123249 50123429 -116526867 - B3 SINE B2 -5 211 29 3 967 2419 38 7 0 chrX 50123540 50123830 -116526466 - RLTR10-int LTR ERVK -1685 302 11 3 967 252 50 0 111 chrX 50123835 50123880 -116526416 - RLTR10-int LTR ERVK -1947 40 1 3 967 3296 36 3 5 chrX 50123880 50124271 -116526025 - RLTR10 LTR ERVK 0 390 1 3 967 1411 222 38 40 chrX 50124419 50124790 -116525506 - ORR1D1 LTR MaLR 0 374 5 3 967 629 146 7 0 chrX 50124790 50124927 -116525369 + (TG)n Simple_repeat Simple_repeat 1 138 0 3 967 21 0 0 0 chrX 50124996 50125017 -116525279 + AT_rich Low_complexity Low_complexity 1 21 0 3 967 243 88 0 0 chrX 50125026 50125060 -116525236 + (CAAG)n Simple_repeat Simple_repeat 2 35 0 3 967 605 213 0 76 chrX 50125077 50125209 -116525087 - B1_Mur2 SINE Alu -16 133 12 3 967 265 299 0 38 chrX 50125995 50126075 -116524221 + ID4_ SINE ID 2 78 -5 3 967 1223 34 0 14 chrX 50126240 50126388 -116523908 - B1_Mus1 SINE Alu -1 147 2 3 967 292 0 0 0 chrX 50126423 50126463 -116523833 + L1_Mus2 LINE L1 6527 6566 0 3 967 1214 48 0 7 chrX 50126645 50126793 -116523503 - B1_Mus2 SINE Alu 0 147 1 3 967 252 334 0 11 chrX 50126944 50127058 -116523238 + Tigger16a DNA Tigger 799 911 -22 3 967 25 0 0 0 chrX 50127112 50127137 -116523159 + AT_rich Low_complexity Low_complexity 1 25 0 3 967 381 243 272 0 chrX 50127274 50127410 -116522886 - B3 SINE B2 -5 211 39 3 967 253 317 39 39 chrX 50128064 50128192 -116522104 - L2 LINE L2 -583 2836 2709 3 967 1163 49 0 20 chrX 50128782 50128929 -116521367 + B1_Mus1 SINE Alu 5 148 0 3 967 246 254 0 17 chrX 50129557 50129617 -116520679 + CT-rich Low_complexity Low_complexity 3 61 0 3 967 602 215 45 30 chrX 50129651 50129785 -116520511 + B1_Mus1 SINE Alu 1 136 -12 3 967 206 51 0 114 chrX 50129786 50129874 -116520422 + G-rich Low_complexity Low_complexity 4 81 0 3 967 230 312 0 0 chrX 50129934 50130014 -116520282 + T-rich Low_complexity Low_complexity 1 80 0 3 967 1198 41 0 26 chrX 50130049 50130201 -116520095 + B1_Mus1 SINE Alu 1 148 0 3 967 879 155 105 160 chrX 50130254 50130401 -116519895 - URR1A DNA MER1_type -1 225 115 3 967 1183 68 0 0 chrX 50130401 50130547 -116519749 - B1_Mus2 SINE Alu 0 147 2 3 967 879 155 105 160 chrX 50130547 50130637 -116519659 - URR1A DNA MER1_type -112 114 1 3 967 450 231 34 17 chrX 50130779 50130898 -116519398 + B1F2 SINE Alu 27 147 -2 3 967 794 167 66 44 chrX 50130969 50131151 -116519145 + B2_Mm2 SINE B2 2 187 -8 3 967 737 249 6 12 chrX 50131551 50131714 -116518582 + RSINE1 SINE B4 2 163 -2 3 967 244 306 96 47 chrX 50132029 50132393 -116517903 + L1M2 LINE L1 2471 2852 -3997 3 967 308 291 129 12 chrX 50132563 50132803 -116517493 + L1M2 LINE L1 3434 3701 -3144 3 967 709 266 43 46 chrX 50132944 50133081 -116517215 + L1M2 LINE L1 3733 3869 -2976 3 967 1290 113 32 0 chrX 50133081 50133267 -116517029 + B2_Mm1t SINE B2 1 192 -1 3 967 709 266 43 46 chrX 50133267 50133543 -116516753 + L1M2 LINE L1 3870 4145 -2700 3 967 320 330 108 31 chrX 50133604 50133892 -116516404 + L1M5 LINE L1 5265 5574 -588 3 967 262 312 119 8 chrX 50133992 50134118 -116516178 - ID_B1 SINE B4 -84 140 1 3 967 1218 41 14 0 chrX 50134174 50134321 -116515975 - B1_Mur4 SINE Alu 0 150 2 3 967 512 261 166 21 chrX 50134321 50134611 -116515685 - Charlie1 DNA MER1_type -47 2734 2403 3 967 451 276 55 22 chrX 50134666 50134863 -116515433 + L1M2 LINE L1 4593 4792 -1757 3 967 2149 177 5 36 chrX 50134863 50135284 -116515012 - MTD LTR MaLR 0 419 12 3 967 1162 56 6 12 chrX 50135383 50135547 -116514749 + B2_Mm2 SINE B2 2 164 -31 3 967 358 274 24 66 chrX 50135673 50135830 -116514466 + L1M2 LINE L1 4859 5045 -1797 3 967 321 316 79 0 chrX 50136228 50136367 -116513929 + L1M2 LINE L1 5041 5190 -1655 3 967 977 89 0 7 chrX 50136371 50136518 -116513778 + B2_Mm2 SINE B2 41 186 -9 3 967 1419 262 109 40 chrX 50136520 50137187 -116513109 + L1M2 LINE L1 5165 5877 -965 3 967 1393 90 5 5 chrX 50137525 50137715 -116512581 + B2_Mm2 SINE B2 2 191 -4 3 967 332 301 24 0 chrX 50137715 50137838 -116512458 + L1M2 LINE L1 5869 6002 -843 3 967 759 161 7 28 chrX 50137845 50137986 -116512310 + B1_Mur2 SINE Alu 12 149 0 3 967 258 268 54 69 chrX 50137989 50138193 -116512103 + L1M2 LINE L1 5998 6198 -804 3 967 233 313 0 24 chrX 50138202 50138287 -116512009 + L1M2 LINE L1 6175 6257 -745 3 967 1239 41 0 0 chrX 50138494 50138641 -116511655 + B1_Mus2 SINE Alu 1 147 0 3 967 234 336 9 103 chrX 50138688 50138747 -116511549 - L2a LINE L2 -263 3163 3109 3 967 1164 272 56 17 chrX 50138747 50138770 -116511526 + MTE2a LTR MaLR 3 32 -347 3 967 279 0 0 0 chrX 50138770 50138801 -116511495 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 967 1164 272 56 17 chrX 50138801 50139136 -116511160 + MTE2a LTR MaLR 33 374 -5 3 967 234 336 9 103 chrX 50139136 50139308 -116510988 - L2a LINE L2 -318 3108 2954 3 967 1476 88 9 5 chrX 50139338 50139554 -116510742 + L1_Mus3 LINE L1 6421 6637 -1 3 967 247 57 0 0 chrX 50139574 50139609 -116510687 - L1_Mus3 LINE L1 -829 5809 5775 3 967 5795 76 17 5 chrX 50139615 50140400 -116509896 + L1_Mus3 LINE L1 5841 6634 -4 3 967 259 100 0 0 chrX 50140410 50140450 -116509846 + B2_Mm2 SINE B2 1 40 -155 3 967 1273 89 83 0 chrX 50140475 50140655 -116509641 + B2_Mm2 SINE B2 1 195 0 3 967 810 112 16 0 chrX 50140663 50140788 -116509508 + B2_Mm2 SINE B2 27 153 -42 3 967 508 206 131 0 chrX 50140809 50140916 -116509380 + B1_Mur4 SINE Alu 9 129 -21 3 967 183 80 0 0 chrX 50140946 50140971 -116509325 + (A)n Simple_repeat Simple_repeat 1 25 0 3 967 964 304 42 88 chrX 50141017 50141493 -116508803 + MLT1C LTR MaLR 6 459 -8 3 967 242 366 29 43 chrX 50141530 50141670 -116508626 - L2a LINE L2 -695 2724 2587 3 967 211 274 13 76 chrX 50141836 50141915 -116508381 + MIR3 SINE MIR 96 169 -39 3 967 269 338 57 31 chrX 50142326 50142485 -116507811 - MIR SINE MIR 0 262 100 3 967 4406 8 0 0 chrX 50143180 50143662 -116506634 - L1Md_A LINE L1 0 6582 6101 3 967 189 0 0 0 chrX 50145144 50145165 -116505131 + (A)n Simple_repeat Simple_repeat 1 21 0 3 967 217 135 58 0 chrX 50146620 50146672 -116503624 - PB1D9 SINE Alu 0 120 66 3 967 627 172 95 0 chrX 50146668 50146784 -116503512 - B1_Mur2 SINE Alu -22 127 1 3 967 1020 57 0 21 chrX 50146963 50147107 -116503189 - B1_Mus1 SINE Alu 0 148 8 3 967 247 224 60 0 chrX 50147006 50147122 -116503174 - ORR1B1-int LTR MaLR -755 754 632 3 967 1070 139 116 16 chrX 50147128 50147318 -116502978 - B3 SINE B2 -6 210 2 3 967 1121 82 0 7 chrX 50148064 50148212 -116502084 - B1_Mus1 SINE Alu -1 147 1 3 967 1435 70 21 0 chrX 50148223 50148409 -116501887 - B2_Mm2 SINE B2 -5 190 1 3 967 199 258 170 11 chrX 50149402 50149496 -116500800 + MIR SINE MIR 18 126 -82 3 967 365 252 8 48 chrX 50150340 50150465 -116499831 - ID_B1 SINE B4 -17 207 88 3 967 207 0 0 0 chrX 50152465 50152488 -116497808 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 967 3245 155 59 3 chrX 50153298 50153415 -116496881 - Lx9 LINE L1 -7 7637 7513 3 967 405 0 0 0 chrX 50153415 50153460 -116496836 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 967 3245 155 59 3 chrX 50153460 50153919 -116496377 - Lx9 LINE L1 -132 7512 7030 3 967 212 195 0 0 chrX 50153938 50153979 -116496317 - B3 SINE B2 -175 41 1 3 967 405 291 9 0 chrX 50154189 50154299 -116495997 + PB1 SINE Alu 1 111 -16 3 967 226 347 0 26 chrX 50155030 50155107 -116495189 - ID4_ SINE ID -6 77 3 3 967 781 268 23 32 chrX 50155229 50155449 -116494847 - ID_B1 SINE B4 -4 220 3 3 967 426 192 10 215 chrX 50155455 50155486 -116494810 - B2_Mm2 SINE B2 -4 191 165 3 967 279 0 0 0 chrX 50155486 50155517 -116494779 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 967 737 192 10 215 chrX 50155517 50155690 -116494606 - B3 SINE B2 -20 196 29 3 967 185 88 0 29 chrX 50155705 50155727 -116494569 + (TTTTC)n Simple_repeat Simple_repeat 5 25 0 3 967 456 19 0 0 chrX 50155727 50155780 -116494516 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 967 185 88 0 29 chrX 50155780 50155792 -116494504 + (TTTTC)n Simple_repeat Simple_repeat 3 14 0 3 967 549 0 0 0 chrX 50155907 50155968 -116494328 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 3 967 648 113 0 68 chrX 50156914 50157050 -116493246 - B1_Mur4 SINE Alu -3 117 1 3 967 598 317 18 9 chrX 50157050 50157277 -116493019 - B4A SINE B4 -63 229 1 3 967 210 37 0 0 chrX 50158849 50158876 -116491420 + (TC)n Simple_repeat Simple_repeat 2 28 0 3 967 360 0 0 0 chrX 50158882 50158922 -116491374 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 967 1338 238 46 12 chrX 50159001 50159325 -116490971 + MTEa LTR MaLR 2 336 -43 3 967 396 358 44 6 chrX 50159511 50159691 -116490605 + Lx8 LINE L1 7033 7219 -254 4 967 493 305 24 24 chrX 50159703 50159908 -116490388 + RMER15 LTR ERVL 371 575 0 4 967 408 220 30 0 chrX 50159964 50160064 -116490232 - MIRb SINE MIR -120 148 46 4 967 1452 68 0 15 chrX 50160402 50160597 -116489699 - B2_Mm2 SINE B2 -2 193 2 4 967 479 297 14 89 chrX 50160908 50161122 -116489174 - B3A SINE B2 0 198 1 4 967 900 203 64 34 chrX 50161510 50161714 -116488582 + B3 SINE B2 1 210 -6 4 967 1723 155 75 12 chrX 50162701 50163034 -116487262 - ORR1B1 LTR MaLR 0 394 41 4 967 289 301 58 47 chrX 50163092 50163263 -116487033 - MER34 LTR ERV1 -66 476 304 4 967 271 316 60 8 chrX 50163302 50163436 -116486860 - MER34 LTR ERV1 -334 237 97 4 967 631 341 77 35 chrX 50163780 50164288 -116486008 - MERVL_2A-int LTR ERVL -2556 3205 2677 4 967 245 254 0 0 chrX 50164302 50164357 -116485939 - ID_B1 SINE B4 -37 187 133 4 967 8979 93 4 0 chrX 50164368 50165612 -116484684 - L1Md_F LINE L1 -2229 3654 2406 4 967 1703 228 93 41 chrX 50165607 50166353 -116483943 - L1Md_F LINE L1 -5566 1072 277 4 967 440 310 16 0 chrX 50166379 50166508 -116483788 - B1F SINE Alu -12 137 7 4 967 228 233 0 0 chrX 50166521 50166564 -116483732 - B1F SINE Alu -10 139 97 4 967 1114 103 0 0 chrX 50166588 50166745 -116483551 + B2_Mm2 SINE B2 1 157 -38 4 967 189 0 0 0 chrX 50166745 50166766 -116483530 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 4 967 659 77 0 0 chrX 50167029 50167120 -116483176 - BC1_Mm scRNA scRNA -61 91 1 4 967 640 202 0 27 chrX 50168267 50168379 -116481917 - PB1D10 SINE Alu -8 109 1 4 967 46 33 0 0 chrX 50168391 50168451 -116481845 + AT_rich Low_complexity Low_complexity 1 60 0 4 967 285 68 68 0 chrX 50168452 50168496 -116481800 + U2 snRNA snRNA 1 47 -141 4 967 727 276 64 0 chrX 50168502 50168705 -116481591 - B3 SINE B2 0 216 1 4 967 376 238 59 37 chrX 50169300 50169435 -116480861 - L1MC5 LINE L1 -23 7938 7801 4 967 776 256 28 28 chrX 50169544 50169757 -116480539 + B3 SINE B2 1 213 -3 4 967 402 200 63 54 chrX 50169899 50170010 -116480286 + PB1D10 SINE Alu 1 112 -5 4 967 906 239 105 0 chrX 50170021 50170230 -116480066 + B4A SINE B4 2 232 -60 4 967 202 229 0 20 chrX 50170320 50170347 -116479949 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 967 351 0 0 0 chrX 50170347 50170386 -116479910 + (TC)n Simple_repeat Simple_repeat 1 39 0 4 967 202 229 0 20 chrX 50170386 50170407 -116479889 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 967 462 301 162 75 chrX 50170409 50170847 -116479449 - MLT1F2 LTR MaLR -59 501 26 4 967 1050 262 163 20 chrX 50171031 50171186 -116479110 + MTD LTR MaLR 42 202 -217 4 967 1583 186 82 28 chrX 50171186 50171377 -116478919 - ORR1D1 LTR MaLR 0 374 182 4 967 567 43 0 0 chrX 50171377 50171447 -116478849 + (GA)n Simple_repeat Simple_repeat 1 70 0 4 967 1583 186 82 28 chrX 50171447 50171610 -116478686 - ORR1D1 LTR MaLR -193 181 3 4 967 1050 262 163 20 chrX 50171610 50171754 -116478542 + MTD LTR MaLR 203 384 -35 4 967 3201 113 8 0 chrX 50171812 50172290 -116478006 + Lx2A1 LINE L1 6519 7000 -8 4 967 651 88 0 0 chrX 50172290 50172381 -116477915 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 4 967 1021 318 26 26 chrX 50172539 50172849 -116477447 + Tigger5 DNA MER2_type 7 316 -2090 4 967 804 298 8 0 chrX 50172836 50173071 -116477225 + Tigger5 DNA MER2_type 2105 2341 -65 4 967 811 219 50 6 chrX 50173089 50173268 -116477028 - B3A SINE B2 -9 189 3 4 967 3421 65 2 5 chrX 50173542 50173990 -116476306 - L1Md_F2 LINE L1 -4 6578 6132 4 967 5446 62 1 28 chrX 50173990 50174402 -116475894 + L1Md_F2 LINE L1 4842 5253 -630 4 967 1154 64 0 0 chrX 50174402 50174542 -116475754 + B1_Mus2 SINE Alu 2 141 -6 4 967 270 0 0 0 chrX 50174551 50174581 -116475715 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 967 5446 62 1 28 chrX 50174581 50174922 -116475374 + L1Md_F2 LINE L1 5254 5585 -298 4 967 7880 47 17 2 chrX 50174923 50175904 -116474392 + L1Md_F2 LINE L1 5587 6582 0 4 967 11881 70 8 22 chrX 50175915 50176437 -116473859 - L1Md_A LINE L1 -2919 2964 2456 4 967 813 25 16 32 chrX 50176437 50176561 -116473735 + L1Md_F3 LINE L1 6462 6583 -1 4 967 11881 112 11 15 chrX 50176561 50178636 -116471660 - L1Md_A LINE L1 -3428 2455 446 4 967 391 284 30 124 chrX 50178725 50178926 -116471370 - RMER30 DNA MER1_type -19 183 2 4 967 1409 76 5 0 chrX 50178978 50179162 -116471134 + B2_Mm1t SINE B2 3 187 -6 4 967 355 329 0 0 chrX 50179189 50179271 -116471025 + ID4_ SINE ID 2 83 0 4 967 809 269 131 6 chrX 50180097 50180441 -116469855 - L1MB7 LINE L1 0 6184 5798 4 967 207 0 0 0 chrX 50180497 50180520 -116469776 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 967 3170 74 18 7 chrX 50180525 50180963 -116469333 - L1Md_F2 LINE L1 -13 6569 6127 4 967 760 216 148 0 chrX 50181344 50181520 -116468776 - B3 SINE B2 -10 206 5 4 967 1427 65 16 5 chrX 50181583 50181770 -116468526 + B2_Mm2 SINE B2 2 190 -5 4 967 207 0 0 0 chrX 50181992 50182015 -116468281 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 4 967 1197 41 0 26 chrX 50182015 50182157 -116468139 - B1_Mus1 SINE Alu -9 139 1 4 967 26 0 0 0 chrX 50182876 50182902 -116467394 + AT_rich Low_complexity Low_complexity 1 26 0 4 967 670 277 64 5 chrX 50182912 50183115 -116467181 + B3 SINE B2 1 215 -1 4 967 223 185 74 0 chrX 50183189 50183243 -116467053 - B1F1 SINE Alu -10 139 82 4 967 536 0 0 15 chrX 50184027 50184092 -116466204 + (TTTTG)n Simple_repeat Simple_repeat 5 68 0 4 967 748 147 45 30 chrX 50184092 50184214 -116466082 - B1_Mur4 SINE Alu -23 127 1 4 967 1215 42 0 0 chrX 50184243 50184387 -116465909 + B1_Mm SINE Alu 3 146 -1 4 967 322 269 12 25 chrX 50184473 50184553 -116465743 - PB1D9 SINE Alu 0 120 42 4 967 331 208 19 19 chrX 50184812 50184915 -116465381 + L1_Mm LINE L1 4443 4545 -1338 4 967 338 321 101 4 chrX 50185454 50185701 -116464595 - L1MB1 LINE L1 -243 5925 5655 4 967 306 204 0 0 chrX 50185866 50185915 -116464381 - PB1D9 SINE Alu -67 53 5 4 967 229 300 0 16 chrX 50185915 50185927 -116464369 - B4 SINE B4 -154 138 79 4 967 204 125 0 0 chrX 50185929 50185961 -116464335 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 4 967 546 227 97 15 chrX 50185961 50186095 -116464201 - B1_Mur2 SINE Alu -1 148 4 4 967 227 306 133 31 chrX 50186476 50186604 -116463692 + MER34A LTR ERV1 345 485 -86 4 967 825 245 109 0 chrX 50186643 50186835 -116463461 - ID_B1 SINE B4 -9 215 3 4 967 22 0 0 0 chrX 50186838 50186860 -116463436 + AT_rich Low_complexity Low_complexity 1 22 0 4 967 579 135 62 23 chrX 50186880 50187009 -116463287 + Lx2 LINE L1 6860 6993 -4 4 967 555 280 0 36 chrX 50187194 50187331 -116462965 - ID_B1 SINE B4 -9 215 84 4 967 1302 248 144 43 chrX 50187345 50187754 -116462542 - L1MA7 LINE L1 -43 6248 5798 4 967 467 33 0 16 chrX 50187754 50187816 -116462480 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 967 1302 248 144 43 chrX 50187816 50187859 -116462437 - L1MA7 LINE L1 -494 5797 5733 4 967 817 181 0 7 chrX 50187859 50187998 -116462298 - B1_Mur3 SINE Alu -7 142 5 4 967 1302 248 144 43 chrX 50187998 50188282 -116462014 - L1MA7 LINE L1 -559 5732 5437 4 967 496 284 38 19 chrX 50188441 50188599 -116461697 + RSINE1 SINE B4 5 165 0 4 967 317 59 39 0 chrX 50188604 50188655 -116461641 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 4 967 262 211 39 0 chrX 50188740 50188792 -116461504 + B3A SINE B2 9 62 -136 4 967 2877 56 26 0 chrX 50188793 50189183 -116461113 + BGLII LTR ERVK 1 400 -21 4 967 552 200 109 0 chrX 50189178 50189288 -116461008 + B3 SINE B2 95 216 0 4 967 704 189 31 0 chrX 50189384 50189511 -116460785 - B3A SINE B2 -67 131 1 4 967 213 312 31 0 chrX 50189546 50189610 -116460686 + ID4 SINE ID 18 83 0 4 967 393 291 28 17 chrX 50189624 50189802 -116460494 + L1MD LINE L1 5502 5681 -561 4 967 257 313 48 37 chrX 50189858 50190130 -116460166 + L1MB7 LINE L1 5696 5970 -214 4 967 214 175 25 0 chrX 50190131 50190171 -116460125 + PB1D7 SINE Alu 12 52 -68 4 967 248 43 0 0 chrX 50190279 50190325 -116459971 + L1Md_F3 LINE L1 6538 6583 -1 4 967 1303 116 17 0 chrX 50190801 50190982 -116459314 + B2_Mm2 SINE B2 2 185 -10 4 967 404 152 0 37 chrX 50191071 50191153 -116459143 + L1_Mm LINE L1 4628 4706 -1177 4 967 791 262 83 10 chrX 50191699 50191988 -116458308 + Lx8 LINE L1 7162 7471 -2 4 967 456 338 26 33 chrX 50192011 50192164 -116458132 + RSINE1 SINE B4 4 155 -10 4 967 293 261 86 56 chrX 50192290 50192379 -116457917 + B3A SINE B2 94 182 -34 4 967 244 258 0 0 chrX 50192427 50192493 -116457803 + L1M4 LINE L1 2124 2189 -3951 4 967 215 205 0 49 chrX 50192503 50192544 -116457752 + B4A SINE B4 12 50 -242 4 967 500 335 12 17 chrX 50192559 50192732 -116457564 + B4 SINE B4 121 292 0 4 967 231 125 0 0 chrX 50192737 50192777 -116457519 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 967 443 74 49 0 chrX 50192782 50192863 -116457433 - L1Md_F2 LINE L1 0 6582 6498 4 967 462 296 78 29 chrX 50192956 50193078 -116457218 + L1M4 LINE L1 3870 4004 -2142 4 967 1635 144 94 29 chrX 50193078 50193429 -116456867 - ORR1D1 LTR MaLR 0 374 1 4 967 462 296 78 29 chrX 50193429 50193511 -116456785 + L1M4 LINE L1 4005 4084 -2062 4 967 412 282 148 34 chrX 50193518 50193694 -116456602 + B3A SINE B2 2 197 -1 4 967 252 199 26 0 chrX 50193706 50193784 -116456512 + L1M3 LINE L1 4031 4141 -1999 4 967 378 279 134 21 chrX 50193787 50193981 -116456315 + ERVL-int LTR ERVL 1768 1983 -3731 4 967 5868 40 17 97 chrX 50193981 50194192 -116456104 - RLTR13C2 LTR ERVK 0 808 670 4 967 8541 50 16 1 chrX 50194192 50195274 -116455022 + MTA_Mm-int LTR MaLR 1 1098 0 4 967 3309 43 5 0 chrX 50195274 50195668 -116454628 + MTA_Mm LTR MaLR 1 396 0 4 967 5868 40 17 97 chrX 50195668 50196333 -116453963 - RLTR13C2 LTR ERVK -139 669 2 4 967 293 290 116 55 chrX 50196333 50196479 -116453817 + ERVL-int LTR ERVL 1978 2132 -3582 4 967 618 299 42 6 chrX 50196481 50196625 -116453671 + B3A SINE B2 3 148 -50 4 967 450 0 0 0 chrX 50196625 50196675 -116453621 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 967 618 299 42 6 chrX 50196675 50196698 -116453598 + B3A SINE B2 149 175 -23 4 967 444 37 0 0 chrX 50196699 50196753 -116453543 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 4 967 453 292 76 6 chrX 50196767 50196939 -116453357 + ERVL-int LTR ERVL 2164 2347 -3410 4 967 5357 82 15 1 chrX 50196942 50198046 -116452250 - L1_Mus1 LINE L1 -1 6581 5422 5 967 856 226 17 17 chrX 50198047 50198227 -116452069 - MTEa LTR MaLR -199 180 1 5 967 286 333 6 55 chrX 50198228 50198393 -116451903 + ERVL-B4-int LTR ERVL 3599 3755 -1959 5 967 277 227 107 0 chrX 50198417 50198492 -116451804 + ERVL-B4-int LTR ERVL 3841 3923 -1791 5 967 301 308 69 23 chrX 50198508 50198681 -116451615 + ERVL-B4-int LTR ERVL 3967 4147 -1338 5 967 316 310 166 52 chrX 50198705 50199049 -116451247 - MLT1A1 LTR MaLR -25 383 1 5 967 1325 288 187 26 chrX 50199051 50199639 -116450657 + ERVL-B4-int LTR ERVL 4150 4841 -916 5 967 2127 124 130 13 chrX 50199639 50200016 -116450280 - MTC LTR MaLR 0 421 1 5 967 433 290 86 43 chrX 50200016 50200091 -116450205 + ERVL-B4-int LTR ERVL 4842 4911 -846 5 967 297 391 51 47 chrX 50200141 50200396 -116449900 + B4 SINE B4 10 265 -27 5 967 307 290 7 144 chrX 50200361 50200398 -116449898 + MT2B LTR ERVL 138 153 -448 5 967 605 217 17 25 chrX 50200398 50200516 -116449780 + B1_Mur1 SINE Alu 1 117 -32 5 967 213 167 0 83 chrX 50200530 50200573 -116449723 + A-rich Low_complexity Low_complexity 6 43 0 5 120 589 265 0 0 chrX 50200573 50200720 -116449576 + B1_Mur1 SINE Alu 2 148 -1 5 968 213 167 0 83 chrX 50200720 50200748 -116449548 + A-rich Low_complexity Low_complexity 44 71 0 5 968 444 19 0 0 chrX 50200799 50200852 -116449444 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 968 873 220 54 15 chrX 50200874 50201077 -116449219 - B3 SINE B2 -5 211 1 5 968 785 256 36 5 chrX 50201588 50201780 -116448516 - B3A SINE B2 0 198 1 5 968 504 284 99 5 chrX 50201783 50201995 -116448301 + ERVL-B4-int LTR ERVL 5483 5714 0 5 968 807 329 122 19 chrX 50201999 50202427 -116447869 + MLT2B1 LTR ERVL 7 478 -42 5 968 668 111 50 33 chrX 50202483 50202585 -116447711 + RLTR31A_Mm LTR ERVK 1 108 -476 5 968 450 0 0 0 chrX 50202585 50202635 -116447661 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 968 668 113 58 70 chrX 50202635 50202695 -116447601 + RLTR31A_Mm LTR ERVK 104 159 -402 5 968 343 0 126 0 chrX 50202698 50202785 -116447511 + (GGAA)n Simple_repeat Simple_repeat 4 101 0 5 968 1138 196 49 10 chrX 50202788 50203075 -116447221 + RLTR31A_Mm LTR ERVK 59 365 -188 5 968 7743 27 12 13 chrX 50203075 50204005 -116446291 + L1Md_F2 LINE L1 5640 6568 -14 5 968 771 11 0 0 chrX 50204014 50204102 -116446194 + (GAAA)n Simple_repeat Simple_repeat 2 89 0 5 968 787 104 88 22 chrX 50204151 50204276 -116446020 + B1_Mus2 SINE Alu 2 138 -9 5 968 257 0 30 0 chrX 50204276 50204309 -116445987 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 968 787 104 88 22 chrX 50204309 50204320 -116445976 + B1_Mus2 SINE Alu 139 147 0 5 968 266 241 271 24 chrX 50204320 50204486 -116445810 + RLTR31_Mm LTR ERVK 355 561 0 5 968 274 324 15 0 chrX 50204524 50204592 -116445704 - RSINE1 SINE B4 -91 74 6 5 968 21 0 0 0 chrX 50204847 50204868 -116445428 + AT_rich Low_complexity Low_complexity 1 21 0 5 968 848 198 93 134 chrX 50205004 50205097 -116445199 + MTC LTR MaLR 104 207 -214 5 968 1206 54 0 0 chrX 50205097 50205244 -116445052 + B1_Mus2 SINE Alu 1 147 0 5 968 848 171 129 186 chrX 50205244 50205471 -116444825 + MTC LTR MaLR 208 421 0 5 968 2602 236 59 34 chrX 50205687 50205728 -116444568 - L1M4c LINE L1 -3088 3288 3250 5 968 2079 121 50 27 chrX 50205728 50205950 -116444346 + RMER17C LTR ERVK 1 225 -185 5 968 288 0 0 0 chrX 50205950 50205982 -116444314 + (CTA)n Simple_repeat Simple_repeat 3 34 0 5 968 2079 121 50 27 chrX 50205982 50206160 -116444136 + RMER17C LTR ERVK 226 409 -1 5 968 2602 246 77 33 chrX 50206160 50207327 -116442969 - L1M4c LINE L1 -3127 3249 2019 5 968 1122 75 0 0 chrX 50208348 50208495 -116441801 - B1_Mus1 SINE Alu 0 148 2 5 968 1017 229 24 0 chrX 50208507 50208712 -116441584 - B3 SINE B2 -6 210 1 5 968 226 281 0 17 chrX 50208721 50208779 -116441517 - ID2 SINE ID -1 82 26 5 968 743 145 222 32 chrX 50208800 50208985 -116441311 + URR1B DNA MER1_type 6 225 0 5 968 589 100 33 16 chrX 50209199 50209321 -116440975 + (TTTC)n Simple_repeat Simple_repeat 2 125 0 5 968 765 162 8 15 chrX 50209328 50209460 -116440836 - B1_Mur3 SINE Alu -1 148 18 5 968 248 0 0 30 chrX 50209467 50209500 -116440796 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 5 968 189 175 0 0 chrX 50209916 50209956 -116440340 + T-rich Low_complexity Low_complexity 1 40 0 5 968 652 264 28 28 chrX 50210028 50210207 -116440089 + B3A SINE B2 2 180 -18 5 968 201 154 0 0 chrX 50210208 50210247 -116440049 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 968 26 30 0 0 chrX 50210249 50210282 -116440014 + AT_rich Low_complexity Low_complexity 1 33 0 5 968 189 107 0 0 chrX 50210393 50210421 -116439875 + (ATG)n Simple_repeat Simple_repeat 2 29 0 5 968 514 311 5 81 chrX 50210708 50210918 -116439378 + B3A SINE B2 1 194 -4 5 968 271 282 13 72 chrX 50210961 50211114 -116439182 + L1M3c LINE L1 162 305 -5836 5 968 547 248 0 146 chrX 50211204 50211355 -116438941 + ID_B1 SINE B4 84 212 -12 5 968 549 0 0 0 chrX 50211355 50211416 -116438880 + (TAAAA)n Simple_repeat Simple_repeat 4 64 0 5 968 496 285 41 29 chrX 50211431 50211601 -116438695 + B2_Mm2 SINE B2 5 176 -19 5 968 330 309 43 14 chrX 50211691 50211829 -116438467 - MLT1A1 LTR MaLR 0 408 267 5 968 473 121 0 0 chrX 50212054 50212120 -116438176 + RSINE1 SINE B4 9 74 -91 5 968 297 173 0 107 chrX 50212056 50212140 -116438156 + B2_Mm2 SINE B2 10 84 -111 5 968 4494 38 38 2 chrX 50212212 50212762 -116437534 - L1Md_F2 LINE L1 -12 6570 6001 5 968 1209 239 137 32 chrX 50212788 50213130 -116437166 - MTEa LTR MaLR -1 378 1 5 968 319 274 137 25 chrX 50213237 50213492 -116436804 + L1M3c LINE L1 1195 1478 -4663 5 968 3155 36 0 13 chrX 50213492 50213884 -116436412 - L1Md_F3 LINE L1 -3 6581 6195 5 968 319 274 137 25 chrX 50213884 50213950 -116436346 + L1M3c LINE L1 1479 1551 -4590 5 968 767 163 0 7 chrX 50213951 50214099 -116436197 + CT-rich Low_complexity Low_complexity 3 149 0 5 968 543 157 88 96 chrX 50214100 50214206 -116436090 - RMER17C LTR ERVK -137 273 180 5 968 1073 57 5 43 chrX 50214206 50214391 -116435905 + (GGAGA)n Simple_repeat Simple_repeat 2 179 0 5 968 543 157 88 96 chrX 50214391 50214523 -116435773 - RMER17C LTR ERVK -231 179 37 5 968 320 365 70 32 chrX 50214900 50215087 -116435209 - L1M3 LINE L1 -531 5647 5454 5 968 448 333 49 19 chrX 50215167 50215433 -116434863 - B4A SINE B4 -18 274 1 5 968 316 295 119 9 chrX 50215503 50215729 -116434567 - L1M3 LINE L1 -840 5300 5050 5 968 248 91 0 22 chrX 50216826 50216871 -116433425 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 968 183 42 0 0 chrX 50217015 50217039 -116433257 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 968 1199 36 0 0 chrX 50217039 50217177 -116433119 - B1_Mus1 SINE Alu -10 138 1 5 968 21 36 0 0 chrX 50217202 50217230 -116433066 + AT_rich Low_complexity Low_complexity 1 28 0 5 968 269 273 0 0 chrX 50217876 50217931 -116432365 - 5S rRNA rRNA -30 91 37 5 968 384 22 0 0 chrX 50218649 50218694 -116431602 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 968 405 0 0 0 chrX 50218694 50218738 -116431558 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 968 667 253 62 0 chrX 50218941 50219087 -116431209 - RSINE1 SINE B4 -8 157 3 5 968 260 154 0 19 chrX 50219330 50219383 -116430913 + CT-rich Low_complexity Low_complexity 1 52 0 5 968 256 282 0 13 chrX 50219409 50219488 -116430808 - L1MEe LINE L1 -2484 3662 3585 5 968 245 277 117 23 chrX 50219626 50219892 -116430404 - L1MEe LINE L1 -3044 3102 2812 5 968 310 287 31 4 chrX 50220165 50220286 -116430010 - MLT1D LTR MaLR -3 624 408 5 968 1081 209 5 5 chrX 50220378 50220580 -116429716 - ORR1D2 LTR MaLR 0 370 169 5 968 639 246 45 57 chrX 50220619 50220796 -116429500 - ORR1D2 LTR MaLR -195 175 1 5 968 226 320 39 29 chrX 50220796 50220859 -116429437 + B4 SINE B4 166 229 -63 5 968 599 0 0 14 chrX 50220860 50220932 -116429364 + (GAAA)n Simple_repeat Simple_repeat 4 74 0 5 968 1015 275 69 13 chrX 50221046 50221573 -116428723 - L1MEe LINE L1 -3521 2625 2084 5 968 545 282 71 56 chrX 50221581 50221919 -116428377 - L1MB5 LINE L1 -17 6157 5815 5 968 824 171 0 7 chrX 50221933 50222080 -116428216 - B1_Mur4 SINE Alu 0 150 5 5 968 984 214 44 10 chrX 50222097 50222300 -116427996 - B3 SINE B2 -6 210 1 5 968 1151 83 0 0 chrX 50222602 50222747 -116427549 - B1_Mm SINE Alu 0 147 3 5 968 30 77 0 0 chrX 50222769 50222834 -116427462 + AT_rich Low_complexity Low_complexity 1 65 0 5 968 1177 77 0 89 chrX 50222886 50222900 -116427396 - B2_Mm2 SINE B2 0 195 182 5 968 1172 75 0 0 chrX 50222900 50223047 -116427249 - B1_Mus1 SINE Alu 0 148 2 5 968 1177 77 0 89 chrX 50223047 50223086 -116427210 - B2_Mm2 SINE B2 -14 181 159 5 968 261 0 0 0 chrX 50223086 50223115 -116427181 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 5 968 1177 77 0 89 chrX 50223115 50223273 -116427023 - B2_Mm2 SINE B2 -37 158 3 5 968 259 342 14 0 chrX 50223447 50223520 -116426776 + ID_B1 SINE B4 26 99 -125 5 968 1012 220 152 79 chrX 50223576 50224108 -116426188 - RMER4B LTR ERVK -14 571 1 5 968 278 200 27 41 chrX 50224218 50224291 -116426005 + B3A SINE B2 1 72 -126 5 968 520 250 9 0 chrX 50224412 50224520 -116425776 - B3A SINE B2 -77 121 13 5 968 663 188 17 8 chrX 50224780 50224898 -116425398 + PB1D9 SINE Alu 2 120 0 5 968 754 174 0 0 chrX 50224906 50225027 -116425269 + B3 SINE B2 6 126 -90 5 968 1190 62 7 0 chrX 50225083 50225229 -116425067 + B1_Mus1 SINE Alu 1 147 -1 5 968 244 226 0 0 chrX 50225230 50225292 -116425004 + A-rich Low_complexity Low_complexity 1 62 0 5 968 1087 52 0 61 chrX 50225333 50225496 -116424800 + L1Md_F2 LINE L1 6429 6581 -1 5 968 1103 141 141 0 chrX 50226110 50226308 -116423988 - URR1A DNA MER1_type 0 226 1 5 968 551 237 26 19 chrX 50226453 50226608 -116423688 + L1_Rod LINE L1 5073 5228 -619 5 968 657 175 71 0 chrX 50226637 50226763 -116423533 + B3 SINE B2 79 213 -3 5 968 284 229 27 17 chrX 50226764 50226881 -116423415 + L1_Mur3 LINE L1 5271 5388 -790 5 968 266 196 8 19 chrX 50227357 50227439 -116422857 + L1_Mur3 LINE L1 5357 5466 -2416 5 968 414 0 0 0 chrX 50227567 50227613 -116422683 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 968 301 261 90 0 chrX 50227646 50227757 -116422539 + Lx8 LINE L1 7353 7473 0 5 968 244 301 60 12 chrX 50227778 50227862 -116422434 + RSINE1 SINE B4 4 91 -74 5 968 469 286 29 75 chrX 50227841 50228015 -116422281 + B4A SINE B4 114 279 -13 5 968 461 265 0 17 chrX 50228103 50228222 -116422074 - PB1D10 SINE Alu 0 117 1 5 968 337 294 81 32 chrX 50228498 50228621 -116421675 + MIRb SINE MIR 69 197 -71 5 968 247 214 67 56 chrX 50228714 50228803 -116421493 - L1MC1 LINE L1 -20 6313 6224 5 968 496 231 82 8 chrX 50228811 50228933 -116421363 + ID_B1 SINE B4 85 215 -9 5 968 414 288 25 0 chrX 50229028 50229146 -116421150 + B4A SINE B4 113 233 -59 6 968 578 261 0 0 chrX 50229145 50229264 -116421032 + RSINE1 SINE B4 5 123 -42 6 968 402 69 0 0 chrX 50229266 50229324 -116420972 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 968 348 24 0 0 chrX 50229334 50229375 -116420921 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 6 968 2515 204 38 119 chrX 50229480 50230197 -116420099 - Lx7 LINE L1 0 7696 7026 6 968 1503 166 221 6 chrX 50230197 50230513 -116419783 - ORR1C2 LTR MaLR 0 384 1 6 968 4139 188 14 33 chrX 50230513 50231306 -116418990 - Lx7 LINE L1 -829 6867 6090 6 968 2130 89 65 16 chrX 50232163 50232471 -116417825 + ORR1A2 LTR MaLR 1 323 -4 6 968 260 202 200 12 chrX 50233751 50233836 -116416460 + L1MB7 LINE L1 6082 6182 -2 6 968 713 256 43 14 chrX 50234154 50234364 -116415932 + ID_B1 SINE B4 9 224 0 6 968 545 242 16 0 chrX 50234469 50234597 -116415699 + RSINE1 SINE B4 3 132 -33 6 968 586 304 130 12 chrX 50234763 50235009 -116415287 + B4A SINE B4 8 282 -10 6 968 349 268 81 47 chrX 50235077 50235211 -116415085 + L1M4 LINE L1 5265 5411 -763 6 968 1067 251 113 15 chrX 50235211 50235289 -116415007 - ORR1D2 LTR MaLR 0 370 280 6 968 715 142 99 8 chrX 50235289 50235410 -116414886 + B1_Mm SINE Alu 2 133 -14 6 968 288 0 0 0 chrX 50235412 50235444 -116414852 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 968 1067 251 113 15 chrX 50235444 50235698 -116414598 - ORR1D2 LTR MaLR -91 279 5 6 968 349 274 78 49 chrX 50235698 50235735 -116414561 + L1M4 LINE L1 5412 5442 -742 6 968 1689 92 4 37 chrX 50235882 50236153 -116414143 - Lx LINE L1 0 6654 6393 6 968 207 0 0 0 chrX 50236364 50236387 -116413909 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 968 453 205 73 0 chrX 50236422 50236535 -116413761 - B3A SINE B2 -70 125 3 6 968 457 322 0 45 chrX 50236581 50236737 -116413559 - RSINE1 SINE B4 -6 159 11 6 968 1026 277 55 26 chrX 50236749 50237222 -116413074 + L1MA4A LINE L1 5530 6020 -280 6 968 24 32 0 0 chrX 50237318 50237349 -116412947 + AT_rich Low_complexity Low_complexity 1 31 0 6 968 2812 137 40 7 chrX 50240253 50240914 -116409382 + RMER19A LTR ERVK 9 737 0 6 968 929 208 96 5 chrX 50241234 50241432 -116408864 + B3 SINE B2 1 216 0 6 968 426 287 0 0 chrX 50241992 50242086 -116408210 + RSINE1 SINE B4 3 96 -69 6 968 5097 98 59 1 chrX 50242173 50243455 -116406841 + L1Md_F2 LINE L1 410 1767 -4116 6 968 14553 66 5 32 chrX 50243443 50244762 -116405534 + L1Md_F2 LINE L1 3663 4922 -961 6 968 1217 48 7 0 chrX 50244762 50244908 -116405388 - B1_Mm SINE Alu 0 147 1 6 968 14553 66 5 32 chrX 50244908 50245565 -116404731 + L1Md_F2 LINE L1 4923 5585 -298 6 968 7698 74 1 6 chrX 50245566 50246561 -116403735 + L1Md_F2 LINE L1 5587 6576 -6 6 968 770 159 15 8 chrX 50246571 50246704 -116403592 + B1_Mur4 SINE Alu 1 134 -16 6 968 540 0 0 0 chrX 50246704 50246764 -116403532 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 6 968 315 85 0 0 chrX 50247326 50247373 -116402923 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 968 508 258 7 13 chrX 50247414 50247567 -116402729 + L1M5 LINE L1 4942 5093 -1053 6 968 198 0 0 0 chrX 50247979 50248001 -116402295 + (TTG)n Simple_repeat Simple_repeat 3 24 0 6 968 317 304 86 66 chrX 50248071 50248314 -116401982 + L1M5 LINE L1 5078 5325 -821 6 968 271 232 0 0 chrX 50248383 50248439 -116401857 + L1M4b LINE L1 3566 3621 -3713 6 968 548 283 75 5 chrX 50249263 50249462 -116400834 + B3 SINE B2 4 216 0 6 968 384 243 0 0 chrX 50249547 50249621 -116400675 - ID4 SINE ID 0 83 10 6 968 181 28 26 77 chrX 50249630 50249669 -116400627 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 6 968 1224 28 7 0 chrX 50249680 50249823 -116400473 - B1_Mus1 SINE Alu 0 148 5 6 968 991 256 0 9 chrX 50249857 50250074 -116400222 - B3 SINE B2 0 216 2 6 968 200 35 35 0 chrX 50250095 50250124 -116400172 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 6 968 416 230 23 0 chrX 50250143 50250230 -116400066 - B1F2 SINE Alu -55 94 6 6 968 1254 237 65 17 chrX 50250284 50250636 -116399660 + L1M4 LINE L1 2675 3043 -3103 6 968 853 256 19 19 chrX 50250639 50250854 -116399442 + B3 SINE B2 2 216 0 6 968 718 201 27 14 chrX 50250871 50251017 -116399279 + B1_Mur1 SINE Alu 2 149 0 6 968 540 284 18 18 chrX 50251046 50251211 -116399085 + RSINE1 SINE B4 1 165 0 6 968 763 78 0 0 chrX 50251252 50251355 -116398941 + B1_Mm SINE Alu 36 138 -9 6 968 213 220 10 90 chrX 50251441 50251541 -116398755 + A-rich Low_complexity Low_complexity 2 93 0 6 968 204 40 0 0 chrX 50252688 50252713 -116397583 + (A)n Simple_repeat Simple_repeat 1 25 0 6 968 468 272 16 26 chrX 50252871 50253060 -116397236 + L1M4 LINE L1 3630 3816 -2330 6 968 393 186 14 0 chrX 50253129 50253194 -116397102 - B1_Mur1 SINE Alu -5 144 79 6 968 438 262 8 23 chrX 50253194 50253323 -116396973 + RSINE1 SINE B4 3 129 -36 6 968 447 207 0 0 chrX 50253348 50253435 -116396861 + ID_B1 SINE B4 131 217 -7 6 968 706 303 5 23 chrX 50253455 50253729 -116396567 + L1M4 LINE L1 4773 5040 -1106 6 968 364 261 50 50 chrX 50253810 50253931 -116396365 - MTE2b LTR MaLR -7 372 252 6 968 654 190 0 47 chrX 50253969 50254096 -116396200 - B1_Mur1 SINE Alu -19 130 10 6 968 638 273 58 0 chrX 50254103 50254275 -116396021 - MTE2b LTR MaLR -197 182 1 6 968 204 111 0 0 chrX 50254735 50254771 -116395525 + (T)n Simple_repeat Simple_repeat 1 36 0 6 968 1100 102 7 0 chrX 50254910 50255057 -116395239 - B1_Mus1 SINE Alu 0 148 1 6 968 596 209 43 36 chrX 50255566 50255705 -116394591 - B1_Mur1 SINE Alu 0 149 10 6 968 357 339 60 6 chrX 50255773 50255939 -116394357 - B3A SINE B2 -23 175 1 6 968 391 267 25 16 chrX 50256150 50256272 -116394024 - RMER15 LTR ERVL -154 421 299 6 968 292 97 143 16 chrX 50256371 50256382 -116393914 - L1Md_F3 LINE L1 -614 5970 5960 6 968 3529 57 25 0 chrX 50256382 50256823 -116393473 - L1_Mus1 LINE L1 0 6567 6116 6 968 438 0 0 0 chrX 50256823 50256874 -116393422 - L1_Mus1 LINE L1 -617 5950 5900 6 968 234 119 24 0 chrX 50256919 50256961 -116393335 - RMER15 LTR ERVL -524 51 9 6 968 204 341 93 40 chrX 50257332 50257558 -116392738 - L2c LINE L2 -38 3349 3112 6 968 403 186 10 10 chrX 50258220 50258318 -116391978 + CT-rich Low_complexity Low_complexity 3 100 0 6 968 751 21 21 0 chrX 50258447 50258544 -116391752 + (TC)n Simple_repeat Simple_repeat 1 99 0 6 968 216 0 0 0 chrX 50258810 50258834 -116391462 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 968 432 0 0 0 chrX 50259166 50259214 -116391082 + (TTA)n Simple_repeat Simple_repeat 2 49 0 6 968 765 89 2 9 chrX 50259220 50259341 -116390955 - B1_Mus1 SINE Alu -5 115 3 6 968 820 211 49 47 chrX 50259495 50259704 -116390592 + B3 SINE B2 1 191 -4 6 968 190 292 51 86 chrX 50259877 50259999 -116390297 + MIRm SINE MIR 51 165 -103 6 968 756 236 13 86 chrX 50261443 50261675 -116388621 + B3 SINE B2 2 216 0 6 968 29 47 0 0 chrX 50262135 50262178 -116388118 + AT_rich Low_complexity Low_complexity 1 43 0 6 968 1098 83 64 109 chrX 50262224 50262238 -116388058 - B2_Mm2 SINE B2 0 195 182 6 968 1266 34 0 0 chrX 50262238 50262385 -116387911 - B1_Mm SINE Alu 0 147 1 6 968 1098 83 64 109 chrX 50262385 50262572 -116387724 - B2_Mm2 SINE B2 -14 181 3 6 968 889 254 60 0 chrX 50262575 50262776 -116387520 - B3 SINE B2 0 216 4 6 968 415 257 0 52 chrX 50262786 50262901 -116387395 - PB1D10 SINE Alu -7 110 2 6 968 514 266 74 5 chrX 50264458 50264647 -116385649 - MIR SINE MIR -27 235 34 6 968 309 109 0 0 chrX 50264655 50264701 -116385595 + (GA)n Simple_repeat Simple_repeat 2 47 0 6 968 261 0 0 0 chrX 50264905 50264934 -116385362 + (A)n Simple_repeat Simple_repeat 1 29 0 6 968 525 135 0 0 chrX 50267483 50267572 -116382724 + (TA)n Simple_repeat Simple_repeat 2 90 0 6 968 222 245 0 0 chrX 50268075 50268124 -116382172 + T-rich Low_complexity Low_complexity 1 49 0 6 968 327 49 0 0 chrX 50268419 50268460 -116381836 + (CTG)n Simple_repeat Simple_repeat 1 41 0 6 968 222 62 0 0 chrX 50269967 50269999 -116380297 + (T)n Simple_repeat Simple_repeat 1 32 0 6 968 1227 41 7 0 chrX 50270001 50270146 -116380150 - B1_Mus2 SINE Alu -1 146 1 6 968 392 314 75 30 chrX 50271806 50272006 -116378290 + MIRb SINE MIR 51 259 -9 6 968 260 309 15 0 chrX 50272103 50272171 -116378125 - tRNA-Ala-GCY_ tRNA tRNA -6 69 1 6 968 540 232 124 80 chrX 50272581 50272782 -116377514 - B3 SINE B2 -6 210 1 6 968 647 330 0 5 chrX 50272800 50272995 -116377301 - B3A SINE B2 0 198 5 6 968 848 155 6 57 chrX 50273646 50273803 -116376493 + B1_Mur3 SINE Alu 1 149 0 6 968 448 246 70 16 chrX 50273959 50274087 -116376209 - B1F1 SINE Alu 0 149 15 6 968 1275 70 10 61 chrX 50274687 50274885 -116375411 - B2_Mm2 SINE B2 -7 188 1 6 968 394 288 167 41 chrX 50274935 50275156 -116375140 - MIR SINE MIR -11 251 3 6 968 629 101 257 0 chrX 50275591 50275700 -116374596 + B1_Mus1 SINE Alu 1 137 -11 6 968 21 0 0 0 chrX 50275725 50275746 -116374550 + AT_rich Low_complexity Low_complexity 1 21 0 6 968 834 105 98 0 chrX 50276015 50276158 -116374138 - B2_Mm2 SINE B2 -3 192 36 6 968 519 204 0 20 chrX 50276275 50276375 -116373921 + RSINE1 SINE B4 4 101 -64 6 968 218 339 0 0 chrX 50277076 50277138 -116373158 - MIRm SINE MIR -25 251 190 6 968 388 257 9 9 chrX 50277230 50277336 -116372960 + PB1D7 SINE Alu 1 106 -14 6 968 3232 18 8 0 chrX 50277545 50277932 -116372364 + MTA_Mm LTR MaLR 1 390 -6 6 968 250 238 0 0 chrX 50277937 50277979 -116372317 - PB1D7 SINE Alu -60 60 19 6 968 312 293 0 0 chrX 50278556 50278631 -116371665 + ID4_ SINE ID 7 81 -2 6 968 220 245 87 87 chrX 50278631 50278654 -116371642 + B4 SINE B4 9 106 -186 6 968 271 282 42 0 chrX 50280511 50280582 -116369714 - Charlie8 DNA MER1_type -1996 432 359 6 968 469 202 33 50 chrX 50280759 50280879 -116369417 - PB1D9 SINE Alu -1 119 2 7 968 789 271 40 16 chrX 50280895 50281146 -116369150 - Lx8 LINE L1 -1 7472 7216 7 968 312 239 143 78 chrX 50281379 50281533 -116368763 - B2_Mm2 SINE B2 -23 172 9 7 968 276 330 34 84 chrX 50281544 50281663 -116368633 - PB1D7 SINE Alu -7 113 1 7 968 344 182 10 93 chrX 50281715 50281812 -116368484 - RSINE1 SINE B4 0 165 77 7 968 469 229 105 0 chrX 50281857 50281962 -116368334 + B3A SINE B2 82 197 -1 7 968 810 220 51 6 chrX 50282149 50282327 -116367969 + B2_Mm2 SINE B2 1 186 -9 7 968 260 258 155 0 chrX 50282752 50282849 -116367447 + PB1D10 SINE Alu 1 112 -5 7 968 253 321 59 15 chrX 50282879 50283015 -116367281 - L1M5 LINE L1 -376 5748 5607 7 968 336 235 56 45 chrX 50283428 50283517 -116366779 - PB1D10 SINE Alu -2 115 26 7 968 1564 70 5 0 chrX 50283715 50283901 -116366395 + B2_Mm1t SINE B2 1 187 -6 7 968 479 283 69 51 chrX 50285678 50285853 -116364443 + Tigger7 DNA MER2_type 2313 2490 -1 7 968 22 56 0 0 chrX 50285938 50285974 -116364322 + AT_rich Low_complexity Low_complexity 1 36 0 7 968 937 206 18 67 chrX 50286017 50286241 -116364055 - B3 SINE B2 -3 213 1 7 968 888 157 7 21 chrX 50286433 50286576 -116363720 - B1_Mur1 SINE Alu -8 141 1 7 968 206 121 0 0 chrX 50286734 50286767 -116363529 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 968 403 218 50 0 chrX 50287022 50287123 -116363173 + L1MA5 LINE L1 6168 6273 -27 7 968 574 200 18 0 chrX 50287251 50287361 -116362935 + B3A SINE B2 30 141 -57 7 968 355 268 0 35 chrX 50287507 50287592 -116362704 + ID4 SINE ID 1 82 -1 7 968 376 256 78 57 chrX 50287949 50287989 -116362307 - RSINE1 SINE B4 -11 154 115 7 968 180 0 0 0 chrX 50287989 50288009 -116362287 + (CAGA)n Simple_repeat Simple_repeat 1 20 0 7 968 376 256 78 57 chrX 50288009 50288109 -116362187 - RSINE1 SINE B4 -51 114 11 7 968 610 185 122 174 chrX 50288316 50288512 -116361784 - B3 SINE B2 -9 186 1 7 968 315 334 112 58 chrX 50288936 50289438 -116360858 - L2 LINE L2 -814 2605 2077 7 968 229 225 0 0 chrX 50289513 50289553 -116360743 - B3A SINE B2 -47 151 112 7 968 650 263 45 0 chrX 50289568 50289701 -116360595 - B3 SINE B2 -77 139 1 7 968 361 345 11 11 chrX 50289739 50289918 -116360378 - L1MC1 LINE L1 -94 6239 6061 7 968 471 63 0 0 chrX 50289918 50289981 -116360315 + (CA)n Simple_repeat Simple_repeat 2 64 0 7 968 1237 49 0 7 chrX 50290090 50290233 -116360063 - B1_Mm SINE Alu -5 142 1 7 968 426 281 26 9 chrX 50290317 50290432 -116359864 - PB1D10 SINE Alu 0 117 1 7 968 266 265 33 78 chrX 50290572 50290602 -116359694 - B4A SINE B4 -206 86 60 7 968 3894 57 32 11 chrX 50290602 50291067 -116359229 - MT2C_Mm LTR ERVL 0 475 1 7 968 362 203 0 0 chrX 50291067 50291126 -116359170 - RSINE1 SINE B4 -105 60 2 7 968 895 249 48 0 chrX 50291169 50291358 -116358938 + B3 SINE B2 1 198 -18 7 968 710 253 79 0 chrX 50291411 50291589 -116358707 + B3A SINE B2 1 192 -6 7 968 353 339 45 0 chrX 50291759 50291871 -116358425 + PB1D7 SINE Alu 4 120 0 7 968 750 307 21 0 chrX 50291877 50292069 -116358227 + B3 SINE B2 20 215 -1 7 968 456 19 0 0 chrX 50292245 50292298 -116357998 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 968 668 257 20 20 chrX 50292310 50292457 -116357839 - RSINE1 SINE B4 -17 148 2 7 968 539 294 12 36 chrX 50292540 50292706 -116357590 - RSINE1 SINE B4 0 165 4 7 968 402 208 164 71 chrX 50294008 50294033 -116356263 + B4 SINE B4 77 225 -63 7 968 656 126 36 0 chrX 50294033 50294144 -116356152 + PB1D9 SINE Alu 6 120 0 7 968 766 266 222 19 chrX 50294201 50294462 -116355834 - MTEb LTR MaLR -65 314 1 7 968 788 139 60 37 chrX 50294486 50294620 -116355676 - B1_Mm SINE Alu -6 141 5 7 968 21 0 0 0 chrX 50294829 50294850 -116355446 + AT_rich Low_complexity Low_complexity 1 21 0 7 968 323 316 0 95 chrX 50294970 50295096 -116355200 + PB1D10 SINE Alu 3 116 -1 7 968 250 273 310 10 chrX 50295098 50295198 -116355098 + RSINE1 SINE B4 3 132 -33 7 968 21 36 0 0 chrX 50295216 50295244 -116355052 + AT_rich Low_complexity Low_complexity 1 28 0 7 968 22 0 0 0 chrX 50295852 50295874 -116354422 + AT_rich Low_complexity Low_complexity 1 22 0 7 968 429 301 97 7 chrX 50296235 50296379 -116353917 - B4A SINE B4 0 292 136 7 968 715 274 37 16 chrX 50296412 50296622 -116353674 - B3A SINE B2 -3 213 1 7 968 303 93 0 0 chrX 50296633 50296676 -116353620 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 968 914 233 93 0 chrX 50296704 50296897 -116353399 - B3 SINE B2 -5 211 1 7 968 562 306 82 5 chrX 50297003 50297187 -116353109 + B3A SINE B2 1 198 0 7 968 560 250 33 33 chrX 50297226 50297346 -116352950 + B3 SINE B2 1 120 -96 7 968 482 0 17 0 chrX 50297360 50297418 -116352878 + (TG)n Simple_repeat Simple_repeat 1 59 0 7 968 1517 70 10 5 chrX 50297459 50297660 -116352636 + L1_Mus1 LINE L1 6366 6567 0 7 968 300 278 78 69 chrX 50298706 50298822 -116351474 - B3A SINE B2 -1 197 81 7 968 406 306 9 0 chrX 50298841 50298952 -116351344 - B3A SINE B2 -86 112 1 7 968 1695 183 81 52 chrX 50299276 50299684 -116350612 - Lx5 LINE L1 -5 7045 6626 7 968 428 196 109 0 chrX 50300136 50300228 -116350068 - PB1D9 SINE Alu 0 120 19 7 968 214 360 50 10 chrX 50300244 50300345 -116349951 + L2 LINE L2 2665 2769 -650 7 968 224 390 12 0 chrX 50301431 50301513 -116348783 + ID4 SINE ID 1 83 0 7 968 708 93 36 36 chrX 50301838 50301949 -116348347 + PB1D9 SINE Alu 3 113 -7 7 968 899 74 24 28 chrX 50301949 50302200 -116348096 + (GA)n Simple_repeat Simple_repeat 1 249 0 7 968 744 213 122 39 chrX 50302503 50302708 -116347588 + ID_B1 SINE B4 2 223 -1 7 968 1230 51 0 0 chrX 50302727 50302865 -116347431 + B1_Mus1 SINE Alu 1 138 -10 7 968 216 0 0 0 chrX 50302876 50302900 -116347396 + (A)n Simple_repeat Simple_repeat 1 24 0 7 968 710 150 168 50 chrX 50302988 50303149 -116347147 + B2_Mm2 SINE B2 2 181 -14 7 968 1476 66 44 0 chrX 50303160 50303342 -116346954 - B2_Mm2 SINE B2 -5 190 1 7 968 21 0 0 0 chrX 50303365 50303386 -116346910 + AT_rich Low_complexity Low_complexity 1 21 0 7 968 450 154 0 0 chrX 50303389 50303467 -116346829 + (TA)n Simple_repeat Simple_repeat 2 79 0 7 968 822 174 14 27 chrX 50303637 50303822 -116346474 - B3 SINE B2 -9 184 7 7 968 329 240 29 110 chrX 50304347 50304483 -116345813 + PB1 SINE Alu 3 127 0 7 968 234 277 10 144 chrX 50304547 50304644 -116345652 + B1F SINE Alu 62 145 -4 7 968 296 275 60 15 chrX 50305014 50305149 -116345147 - L1MA4 LINE L1 -1176 5882 5736 7 968 232 294 116 14 chrX 50305187 50305256 -116345040 - ID4_ SINE ID -6 77 2 7 968 235 294 0 0 chrX 50305288 50305356 -116344940 - PB1D10 SINE Alu -5 112 45 7 968 218 32 32 0 chrX 50305880 50305911 -116344385 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 968 331 246 0 0 chrX 50305952 50306017 -116344279 - RSINE1 SINE B4 -74 91 27 7 968 272 208 19 0 chrX 50306028 50306081 -116344215 + B3A SINE B2 3 56 -142 7 968 277 268 0 90 chrX 50306242 50306320 -116343976 - PB1D7 SINE Alu 0 120 50 7 968 261 250 0 84 chrX 50306384 50306467 -116343829 - RSINE1 SINE B4 -17 148 73 7 968 218 222 0 0 chrX 50309450 50309495 -116340801 + T-rich Low_complexity Low_complexity 1 45 0 7 968 297 131 0 0 chrX 50310839 50310900 -116339396 + (GA)n Simple_repeat Simple_repeat 1 61 0 7 968 381 247 21 63 chrX 50311134 50311229 -116339067 - ID_B1 SINE B4 -53 171 81 7 968 465 110 0 0 chrX 50311263 50311336 -116338960 + (TG)n Simple_repeat Simple_repeat 1 73 0 7 968 420 82 0 0 chrX 50311336 50311397 -116338899 + (GA)n Simple_repeat Simple_repeat 2 62 0 7 968 261 308 98 45 chrX 50311404 50311516 -116338780 - B3A SINE B2 -47 151 34 7 968 398 273 20 0 chrX 50311516 50311533 -116338763 + B4A SINE B4 67 85 -207 7 968 571 213 0 21 chrX 50311533 50311653 -116338643 + B1_Mur3 SINE Alu 1 108 -12 7 968 441 282 0 26 chrX 50311675 50311788 -116338508 + PB1D10 SINE Alu 5 114 -3 7 968 495 254 130 9 chrX 50311788 50311903 -116338393 + ID_B1 SINE B4 93 221 -3 7 968 26 30 0 0 chrX 50312297 50312330 -116337966 + AT_rich Low_complexity Low_complexity 1 33 0 7 968 770 301 6 0 chrX 50312503 50312679 -116337617 + B3A SINE B2 4 180 -18 7 968 502 250 43 29 chrX 50312735 50312875 -116337421 + B3A SINE B2 51 192 -6 7 968 486 254 81 17 chrX 50312931 50313103 -116337193 + L1MB7 LINE L1 5850 6032 -152 7 968 1218 204 9 0 chrX 50313093 50313309 -116336987 - Lx9 LINE L1 -330 7314 7097 7 968 340 336 0 92 chrX 50313373 50313514 -116336782 + ID_B1 SINE B4 79 206 -18 7 968 189 171 0 0 chrX 50313693 50313728 -116336568 + CT-rich Low_complexity Low_complexity 2 36 0 7 968 628 221 7 79 chrX 50313842 50313994 -116336302 + B1F SINE Alu 4 144 -5 7 968 824 181 15 13 chrX 50314003 50314161 -116336135 + B3 SINE B2 1 171 -22 7 968 4501 103 153 84 chrX 50314277 50315124 -116335172 - RMER17A2 LTR ERVK 0 906 1 7 968 500 279 0 15 chrX 50315178 50315309 -116334987 + ID_B1 SINE B4 84 212 -12 8 968 849 185 15 82 chrX 50316248 50316279 -116334017 - B2_Mm2 SINE B2 0 195 170 8 968 1457 77 16 0 chrX 50316279 50316461 -116333835 + B2_Mm2 SINE B2 1 185 -10 8 968 849 185 15 82 chrX 50316461 50316635 -116333661 - B2_Mm2 SINE B2 -26 169 4 8 968 1269 48 0 7 chrX 50316682 50316830 -116333466 - B1_Mus2 SINE Alu 0 147 1 8 968 333 0 0 0 chrX 50316922 50316959 -116333337 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 968 363 317 56 72 chrX 50316991 50317171 -116333125 - B4A SINE B4 -115 177 1 8 968 248 152 65 0 chrX 50317208 50317254 -116333042 - B1_Mur2 SINE Alu -12 137 89 8 968 449 305 170 44 chrX 50317254 50317618 -116332678 + RMER12B LTR ERVK 1 410 -994 8 968 363 162 38 18 chrX 50317640 50317724 -116332572 - B1_Mus2 SINE Alu -62 85 1 8 968 715 185 21 43 chrX 50317740 50317881 -116332415 - B1_Mus1 SINE Alu -1 147 10 8 968 244 233 16 182 chrX 50317781 50317907 -116332389 - MT2B LTR ERVL -344 257 153 8 968 424 237 7 7 chrX 50318050 50318139 -116332157 + ID_B1 SINE B4 4 92 -200 8 968 2482 111 3 0 chrX 50318169 50318494 -116331802 - ORR1A2 LTR MaLR 0 327 2 8 968 817 287 66 21 chrX 50318541 50318783 -116331513 + B4A SINE B4 1 253 -39 8 968 1234 36 0 0 chrX 50318788 50318925 -116331371 + B1_Mus2 SINE Alu 1 137 -10 8 968 216 0 0 0 chrX 50318925 50318949 -116331347 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8 968 324 83 0 0 chrX 50319022 50319070 -116331226 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 968 225 170 0 0 chrX 50319074 50319091 -116331205 + A-rich Low_complexity Low_complexity 1 17 0 8 968 1305 41 0 0 chrX 50319091 50319238 -116331058 + B1_Mm SINE Alu 1 147 0 8 968 225 170 0 0 chrX 50319238 50319267 -116331029 + A-rich Low_complexity Low_complexity 18 46 0 8 968 685 304 59 10 chrX 50319291 50319494 -116330802 + B4A SINE B4 74 286 -6 8 968 232 265 86 29 chrX 50319720 50319790 -116330506 - ORR1E LTR MaLR -223 136 63 8 968 398 315 9 9 chrX 50319804 50319913 -116330383 - B4A SINE B4 -118 174 66 8 968 489 34 0 0 chrX 50320298 50320357 -116329939 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 8 968 743 204 0 15 chrX 50320361 50320495 -116329801 + B1F SINE Alu 17 148 -1 8 968 323 225 27 53 chrX 50320580 50320655 -116329641 - RSINE1 SINE B4 0 165 93 8 968 772 197 13 20 chrX 50321378 50321528 -116328768 + B1F SINE Alu 1 149 0 8 968 1362 109 16 16 chrX 50322111 50322298 -116327998 + B2_Mm2 SINE B2 1 187 -8 8 968 386 159 0 0 chrX 50322416 50322479 -116327817 + B1_Mur1 SINE Alu 58 120 -29 8 968 258 164 58 29 chrX 50322417 50322486 -116327810 + MT2B LTR ERVL 214 284 -317 8 968 289 0 49 0 chrX 50322564 50322605 -116327691 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 8 968 1259 36 0 0 chrX 50322605 50322743 -116327553 - B1_Mus2 SINE Alu -9 138 1 8 968 425 300 28 109 chrX 50322872 50323098 -116327198 + L1MC4 LINE L1 7488 7719 -323 8 968 1175 62 21 0 chrX 50323098 50323242 -116327054 + B1_Mus1 SINE Alu 2 148 0 8 968 425 300 28 109 chrX 50323242 50323317 -116326979 + L1MC4 LINE L1 7720 7763 -279 8 968 1267 115 49 0 chrX 50323317 50323500 -116326796 - B2_Mm2 SINE B2 -3 192 1 8 968 425 300 28 109 chrX 50323500 50323556 -116326740 + L1MC4 LINE L1 7764 7817 -225 8 968 414 228 13 0 chrX 50323556 50323635 -116326661 + ID4 SINE ID 2 81 -2 8 968 349 158 18 0 chrX 50323655 50323712 -116326584 + RSINE1 SINE B4 11 68 -97 8 968 1233 75 0 0 chrX 50323744 50323891 -116326405 - B1_Mus2 SINE Alu 0 147 1 8 968 335 360 0 0 chrX 50323891 50323977 -116326319 + RSINE1 SINE B4 58 143 -22 8 968 3416 172 81 73 chrX 50324143 50324271 -116326025 - RMER1A Other Other -10 1020 877 8 968 342 0 0 0 chrX 50324271 50324309 -116325987 + (GA)n Simple_repeat Simple_repeat 2 39 0 8 968 3416 186 66 69 chrX 50324309 50325058 -116325238 - RMER1A Other Other -154 876 49 8 968 417 119 0 56 chrX 50325060 50325131 -116325165 - B1_Mur4 SINE Alu 0 150 84 8 968 294 211 0 0 chrX 50325556 50325613 -116324683 + ID4_ SINE ID 18 74 -9 8 968 674 239 7 0 chrX 50325639 50325777 -116324519 + B1F SINE Alu 3 141 -8 8 968 720 169 57 78 chrX 50325786 50325927 -116324369 + B1_Mur4 SINE Alu 5 142 -8 8 968 288 53 0 0 chrX 50325928 50325966 -116324330 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 968 641 265 58 16 chrX 50325999 50326187 -116324109 + MTD LTR MaLR 12 207 -212 8 968 857 191 7 13 chrX 50326191 50326340 -116323956 + B1_Mur2 SINE Alu 2 149 0 8 968 567 172 0 0 chrX 50326340 50326355 -116323941 + A-rich Low_complexity Low_complexity 1 15 0 8 968 1281 61 0 0 chrX 50326355 50326503 -116323793 + B1_Mus1 SINE Alu 1 148 0 8 968 567 172 0 0 chrX 50326503 50326609 -116323687 + A-rich Low_complexity Low_complexity 16 121 0 8 968 1010 234 34 19 chrX 50326618 50326827 -116323469 + B3 SINE B2 1 212 -4 8 968 284 192 19 0 chrX 50326918 50326970 -116323326 + MTD LTR MaLR 276 328 -91 8 968 403 295 14 10 chrX 50326974 50327091 -116323205 + B1F SINE Alu 12 132 -17 8 968 621 299 65 0 chrX 50327107 50327261 -116323035 + RSINE1 SINE B4 2 165 0 8 968 1368 99 50 0 chrX 50327287 50327469 -116322827 + B2_Mm2 SINE B2 1 191 -4 8 968 1207 127 22 6 chrX 50327560 50327742 -116322554 + B2_Mm2 SINE B2 2 186 -9 8 968 291 352 34 0 chrX 50327747 50327835 -116322461 + B1F2 SINE Alu 8 98 -51 8 968 409 228 147 10 chrX 50328443 50328545 -116321751 + PB1D10 SINE Alu 1 116 -1 8 968 26 0 0 0 chrX 50328970 50328996 -116321300 + AT_rich Low_complexity Low_complexity 1 26 0 8 968 550 214 118 65 chrX 50328999 50329169 -116321127 + B2_Mm2 SINE B2 1 179 -16 8 968 519 95 0 0 chrX 50329241 50329315 -116320981 + (GA)n Simple_repeat Simple_repeat 1 74 0 8 968 629 285 25 25 chrX 50329316 50329336 -116320960 - RSINE1 SINE B4 -1 164 145 8 968 3410 60 2 2 chrX 50329336 50329735 -116320561 + MTB LTR MaLR 1 399 -1 8 968 629 285 25 25 chrX 50329735 50329876 -116320420 - RSINE1 SINE B4 -21 144 3 8 968 1112 214 0 5 chrX 50330470 50330663 -116319633 + B3 SINE B2 1 192 -24 8 968 43 64 0 0 chrX 50330683 50330761 -116319535 + AT_rich Low_complexity Low_complexity 1 78 0 8 968 1072 30 91 8 chrX 50330773 50330905 -116319391 - B1_Mus1 SINE Alu -5 143 1 8 968 1244 107 39 17 chrX 50330914 50331095 -116319201 - B2_Mm2 SINE B2 -9 186 2 8 968 703 302 0 0 chrX 50331122 50331281 -116319015 - RSINE1 SINE B4 -3 162 4 8 968 22 0 0 0 chrX 50331294 50331316 -116318980 + AT_rich Low_complexity Low_complexity 1 22 0 8 968 602 245 81 62 chrX 50331327 50331481 -116318815 + L1M2 LINE L1 4960 5116 -1027 8 968 755 43 252 65 chrX 50331481 50331604 -116318692 + B1_Mus1 SINE Alu 2 147 -1 8 1 602 245 81 62 chrX 50331604 50331758 -116318538 + L1M2 LINE L1 5117 5274 -869 8 969 1238 145 59 9 chrX 50331841 50332063 -116318233 + Lx3C LINE L1 6729 6961 -15 8 969 288 53 0 0 chrX 50332063 50332101 -116318195 + (TAA)n Simple_repeat Simple_repeat 1 38 0 8 969 952 166 21 0 chrX 50332112 50332257 -116318039 + B1_Mur3 SINE Alu 2 149 0 8 969 391 347 16 16 chrX 50332278 50332404 -116317892 + B3 SINE B2 2 127 -89 8 969 1418 41 94 0 chrX 50332445 50332616 -116317680 - B2_Mm2 SINE B2 -7 188 2 8 969 1001 142 13 13 chrX 50332618 50332768 -116317528 - B1_Mur4 SINE Alu 0 150 1 8 969 505 240 160 32 chrX 50332793 50332918 -116317378 + B1F SINE Alu 1 141 -8 8 969 658 257 104 0 chrX 50333204 50333387 -116316909 - B3 SINE B2 -14 202 1 8 969 1195 313 36 14 chrX 50333544 50333904 -116316392 - MER21B LTR ERV1 -163 700 333 8 969 1345 219 113 44 chrX 50333938 50334134 -116316162 - Lx9 LINE L1 -1 7643 7416 8 969 1428 45 78 0 chrX 50334134 50334152 -116316144 - B2_Mm1t SINE B2 0 193 176 8 969 351 0 0 0 chrX 50334152 50334191 -116316105 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 8 969 1428 45 78 0 chrX 50334191 50334351 -116315945 - B2_Mm1t SINE B2 -18 175 2 8 969 1345 219 113 44 chrX 50334351 50334612 -116315684 - Lx9 LINE L1 -229 7415 7154 8 969 362 206 96 0 chrX 50334777 50334850 -116315446 + ID4 SINE ID 4 83 0 8 969 231 289 133 39 chrX 50334965 50335145 -116315151 + L1MC4 LINE L1 7409 7605 -437 8 969 520 221 83 56 chrX 50335181 50335325 -116314971 + B1_Mur1 SINE Alu 1 148 -1 8 969 528 278 38 16 chrX 50335490 50335652 -116314644 + ID_B1 SINE B4 58 217 -75 8 969 300 299 147 13 chrX 50335827 50335983 -116314313 + BLACKJACK DNA AcHobo 1091 1267 -1677 8 969 559 305 46 26 chrX 50336063 50336258 -116314038 - MLT2D LTR ERVL -50 364 166 8 969 234 308 104 116 chrX 50336300 50336568 -116313728 + B4A SINE B4 26 290 -2 8 969 441 0 0 0 chrX 50336588 50336637 -116313659 + (CA)n Simple_repeat Simple_repeat 1 49 0 8 969 490 188 23 120 chrX 50336751 50336884 -116313412 - PB1D7 SINE Alu 0 120 1 8 969 2924 174 160 27 chrX 50336908 50337657 -116312639 + RLTR25B LTR ERVK 5 853 -175 8 969 297 0 0 0 chrX 50337942 50337975 -116312321 + (TTA)n Simple_repeat Simple_repeat 2 34 0 8 969 801 48 0 0 chrX 50337975 50338079 -116312217 - B1_Mus2 SINE Alu -3 144 41 8 969 271 225 262 47 chrX 50338164 50338313 -116311983 + RLTR25B LTR ERVK 742 922 -106 8 969 186 43 0 0 chrX 50338315 50338338 -116311958 + (CG)n Simple_repeat Simple_repeat 2 24 0 8 969 297 51 0 0 chrX 50338337 50338376 -116311920 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 969 351 0 0 0 chrX 50338376 50338415 -116311881 + (GA)n Simple_repeat Simple_repeat 2 40 0 8 969 1326 26 1 6 chrX 50338451 50338508 -116311788 - MTA_Mm LTR MaLR -177 219 185 8 969 471 18 0 0 chrX 50338508 50338564 -116311732 + (TC)n Simple_repeat Simple_repeat 2 57 0 8 969 1100 37 52 0 chrX 50338566 50338701 -116311595 - B1_Mus1 SINE Alu -6 142 1 9 969 1326 101 8 73 chrX 50338701 50338893 -116311403 - MTA_Mm LTR MaLR -212 184 1 8 969 273 230 23 11 chrX 50339038 50339126 -116311170 - MER97a DNA MER1_type? -58 836 748 9 969 269 274 59 12 chrX 50339228 50339313 -116310983 + PB1D10 SINE Alu 29 117 0 9 969 720 169 77 0 chrX 50339347 50339477 -116310819 + B1_Mur4 SINE Alu 5 144 -6 9 969 632 235 0 0 chrX 50339713 50339832 -116310464 + ID_B1 SINE B4 100 218 -6 9 969 300 234 174 45 chrX 50339716 50339917 -116310379 - YREP_Mm Unknown Unknown -1517 295 69 9 969 1209 34 0 20 chrX 50340107 50340257 -116310039 + B1_Mm SINE Alu 1 147 0 9 969 243 133 0 0 chrX 50340349 50340394 -116309902 + (TTAG)n Simple_repeat Simple_repeat 3 47 0 9 969 402 262 55 27 chrX 50340395 50340505 -116309791 - PB1D7 SINE Alu -7 113 1 9 969 755 79 3 11 chrX 50340814 50340932 -116309364 - B1_Mus1 SINE Alu -1 119 1 9 969 216 0 0 0 chrX 50342054 50342078 -116308218 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 969 364 285 74 88 chrX 50342460 50342491 -116307805 - ID_B1 SINE B4 -39 253 198 9 969 519 246 0 33 chrX 50342491 50342613 -116307683 - B1F2 SINE Alu 0 149 32 9 969 364 285 74 88 chrX 50342613 50342718 -116307578 - ID_B1 SINE B4 -39 197 1 9 969 274 222 228 53 chrX 50342950 50343064 -116307232 - B1F2 SINE Alu -8 142 9 9 969 199 298 0 0 chrX 50343637 50343694 -116306602 - MIR SINE MIR -3 259 203 9 969 247 246 0 76 chrX 50343709 50343788 -116306508 - B3 SINE B2 0 216 144 9 969 1225 66 0 0 chrX 50343809 50343976 -116306320 + L1_Mm LINE L1 4489 4655 -1228 9 969 241 276 181 0 chrX 50344042 50344147 -116306149 - MIR SINE MIR -131 131 8 9 969 437 247 64 12 chrX 50344532 50344649 -116305647 - B1F SINE Alu -8 112 1 9 969 806 226 61 17 chrX 50344860 50345040 -116305256 - B3 SINE B2 -3 213 26 9 969 423 231 178 0 chrX 50345058 50345227 -116305069 - Lx5 LINE L1 -11 7039 6841 9 969 322 346 74 3 chrX 50345570 50345706 -116304590 - B1F SINE Alu -2 145 3 9 969 218 373 60 0 chrX 50345646 50345713 -116304583 - B4A SINE B4 -141 151 81 9 969 989 123 0 33 chrX 50345877 50346028 -116304268 - B1_Mus2 SINE Alu 0 147 2 9 969 261 212 12 12 chrX 50346028 50346109 -116304187 - Lx9 LINE L1 -13 7631 7551 9 969 315 0 0 0 chrX 50346136 50346171 -116304125 + (TATG)n Simple_repeat Simple_repeat 4 38 0 9 969 357 269 30 0 chrX 50346181 50346315 -116303981 - Lx9 LINE L1 -208 7436 7299 9 969 341 349 27 9 chrX 50346359 50346469 -116303827 - RSINE1 SINE B4 -50 115 4 9 969 255 244 372 0 chrX 50346469 50346547 -116303749 - PB1 SINE Alu -10 117 11 9 969 21 26 0 26 chrX 50346914 50346933 -116303363 + AT_rich Low_complexity Low_complexity 1 19 0 9 969 1110 75 0 7 chrX 50346933 50347080 -116303216 - B1_Mus2 SINE Alu 0 147 2 9 969 21 26 0 26 chrX 50347080 50347099 -116303197 + AT_rich Low_complexity Low_complexity 1 19 0 9 969 356 291 160 30 chrX 50347416 50347547 -116302749 - PB1D10 SINE Alu 0 149 2 9 969 238 250 80 80 chrX 50347800 50347820 -116302476 + PB1 SINE Alu 27 125 -1 9 969 344 127 215 0 chrX 50347820 50347899 -116302397 + ID_B1 SINE B4 128 223 -1 9 969 1138 64 0 0 chrX 50347926 50348066 -116302230 + B1_Mus1 SINE Alu 3 142 -6 9 969 303 71 0 0 chrX 50348290 50348332 -116301964 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 969 446 316 0 0 chrX 50348399 50348497 -116301799 + B1F SINE Alu 1 98 -51 9 969 764 200 7 0 chrX 50348714 50348849 -116301447 + B1F2 SINE Alu 14 149 0 9 969 308 321 74 0 chrX 50349631 50349712 -116300584 + PB1D9 SINE Alu 27 113 -7 9 969 394 264 8 60 chrX 50349934 50350051 -116300245 - B1F2 SINE Alu -6 111 1 9 969 1267 97 11 16 chrX 50350173 50350362 -116299934 - B2_Mm2 SINE B2 -7 188 1 9 969 672 242 124 21 chrX 50350449 50350635 -116299661 + ID_B1 SINE B4 2 206 -18 9 969 460 293 67 8 chrX 50350702 50350836 -116299460 - B1F1 SINE Alu -7 142 1 9 969 459 0 0 0 chrX 50351110 50351161 -116299135 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 969 1397 70 16 11 chrX 50351232 50351419 -116298877 - B2_Mm2 SINE B2 -7 188 1 9 969 650 251 269 18 chrX 50351470 50351697 -116298599 + B4A SINE B4 1 284 -8 9 969 1165 48 14 0 chrX 50351794 50351940 -116298356 + B1_Mus1 SINE Alu 1 148 0 9 969 527 0 16 0 chrX 50352409 50352472 -116297824 + (TG)n Simple_repeat Simple_repeat 2 65 0 9 969 1028 238 35 25 chrX 50352510 50352794 -116297502 - B4A SINE B4 -3 289 3 9 969 707 224 97 20 chrX 50352894 50353090 -116297206 - B3 SINE B2 -4 212 2 9 969 555 163 24 0 chrX 50353117 50353240 -116297056 + CT-rich Low_complexity Low_complexity 1 126 0 9 969 360 0 0 0 chrX 50353484 50353524 -116296772 + (CA)n Simple_repeat Simple_repeat 1 40 0 9 969 1371 67 39 0 chrX 50353620 50353800 -116296496 + B2_Mm2 SINE B2 1 187 -8 9 969 189 0 0 0 chrX 50353817 50353838 -116296458 + (TA)n Simple_repeat Simple_repeat 2 22 0 9 969 213 39 0 0 chrX 50353838 50353863 -116296433 + (TG)n Simple_repeat Simple_repeat 1 26 0 9 969 542 227 53 0 chrX 50353875 50354007 -116296289 - B1F SINE Alu -9 140 2 9 969 689 280 107 15 chrX 50354019 50354215 -116296081 - ID_B1 SINE B4 -3 221 8 9 969 1012 126 54 16 chrX 50354232 50354418 -116295878 - B2_Mm2 SINE B2 -2 193 1 9 969 219 69 0 0 chrX 50354798 50354827 -116295469 + (TCCCC)n Simple_repeat Simple_repeat 3 31 0 9 969 317 302 1 0 chrX 50354831 50354910 -116295386 - B1F1 SINE Alu -16 133 54 9 969 334 295 42 0 chrX 50354968 50355063 -116295233 + PB1D10 SINE Alu 6 104 -13 9 969 23 0 0 29 chrX 50355666 50355687 -116294609 + AT_rich Low_complexity Low_complexity 1 21 0 9 969 1201 48 7 0 chrX 50355687 50355833 -116294463 - B1_Mus1 SINE Alu 0 148 2 9 969 23 0 0 29 chrX 50355833 50355845 -116294451 + AT_rich Low_complexity Low_complexity 1 12 0 9 969 426 237 65 29 chrX 50355845 50355984 -116294312 - B1F SINE Alu -4 145 2 9 969 198 167 0 0 chrX 50355988 50356024 -116294272 + (TTA)n Simple_repeat Simple_repeat 2 37 0 9 969 244 375 62 0 chrX 50356151 50356231 -116294065 - AluG_3 SINE Alu -90 221 137 9 969 518 241 89 0 chrX 50356277 50356389 -116293907 + B3 SINE B2 1 122 -94 9 969 851 231 34 0 chrX 50356469 50356677 -116293619 + B3 SINE B2 2 216 0 9 969 819 162 23 6 chrX 50356970 50357144 -116293152 + CT-rich Low_complexity Low_complexity 1 177 0 9 969 524 211 97 0 chrX 50357161 50357275 -116293021 - B1_Mus1 SINE Alu -23 125 1 9 969 21 36 0 0 chrX 50357275 50357303 -116292993 + AT_rich Low_complexity Low_complexity 1 28 0 9 969 872 265 0 5 chrX 50357368 50357580 -116292716 - B3 SINE B2 -5 211 1 9 969 429 94 174 5 chrX 50358062 50358165 -116292131 - B2_Mm2 SINE B2 -8 187 47 9 969 1137 68 98 0 chrX 50358193 50358356 -116291940 - B2_Mm2 SINE B2 -14 181 3 9 969 807 229 108 16 chrX 50358621 50358807 -116291489 - B3 SINE B2 -13 203 1 9 969 344 235 0 93 chrX 50358822 50358930 -116291366 - B2_Mm2 SINE B2 -51 144 47 9 969 1250 90 6 22 chrX 50358977 50359158 -116291138 - B2_Mm1t SINE B2 -14 179 2 9 969 238 125 0 0 chrX 50359680 50359712 -116290584 - ID SINE ID -179 45 14 9 969 588 332 77 30 chrX 50359815 50360202 -116290094 - L1MC4a LINE L1 -2033 5849 5437 9 969 792 237 35 0 chrX 50360281 50360479 -116289817 - B3 SINE B2 -11 205 1 9 969 1283 75 20 61 chrX 50360606 50360804 -116289492 + B2_Mm2 SINE B2 1 190 -5 9 969 843 307 26 3 chrX 50360805 50361145 -116289151 - L1MC4a LINE L1 -1085 5061 4714 9 969 1114 62 14 0 chrX 50362120 50362266 -116288030 - B1_Mus1 SINE Alu 0 148 1 9 969 490 262 49 14 chrX 50362419 50362562 -116287734 - B1F SINE Alu -1 148 1 9 969 263 269 124 9 chrX 50362592 50362697 -116287599 - MIRb SINE MIR -28 240 124 9 969 182 341 27 128 chrX 50362704 50362852 -116287444 - MIRc SINE MIR -126 142 10 9 969 298 96 350 133 chrX 50363681 50363801 -116286495 - B2_Mm2 SINE B2 -3 192 47 9 969 1171 95 6 6 chrX 50363871 50364040 -116286256 - B2_Mm2 SINE B2 -26 169 1 9 969 1355 183 68 60 chrX 50364345 50364712 -116285584 - ORR1D1 LTR MaLR 0 374 5 9 969 539 325 0 0 chrX 50364940 50365066 -116285230 + B1F SINE Alu 3 128 -21 9 969 183 368 35 0 chrX 50365254 50365341 -116284955 - MIR3 SINE MIR -11 197 108 9 969 298 287 198 32 chrX 50365576 50365702 -116284594 + B1_Mus2 SINE Alu 1 147 0 9 969 447 35 0 0 chrX 50365825 50365882 -116284414 + (TG)n Simple_repeat Simple_repeat 1 57 0 9 969 304 323 21 0 chrX 50366056 50366152 -116284144 + MER5A DNA MER1_type 92 189 0 9 969 546 289 114 23 chrX 50366632 50366917 -116283379 - B4A SINE B4 0 292 1 9 969 317 282 93 0 chrX 50366948 50367037 -116283259 - ID4 SINE ID -55 97 2 9 969 254 311 65 46 chrX 50367055 50367163 -116283133 - PB1D9 SINE Alu -1 119 10 9 969 192 268 0 0 chrX 50367169 50367240 -116283056 + CT-rich Low_complexity Low_complexity 2 72 0 9 969 240 239 240 33 chrX 50367301 50367422 -116282874 - B1F1 SINE Alu 0 149 4 9 969 438 304 29 0 chrX 50367426 50367528 -116282768 - B1F1 SINE Alu -35 114 10 9 969 216 360 34 23 chrX 50367451 50367539 -116282757 - B4A SINE B4 -119 173 85 9 969 944 260 79 17 chrX 50367588 50367991 -116282305 - Lx8 LINE L1 -35 7438 7011 1 969 403 346 24 36 chrX 50368018 50368183 -116282113 - RSINE1 SINE B4 -2 163 1 1 969 437 141 14 0 chrX 50368335 50368406 -116281890 - B1_Mur2 SINE Alu -9 140 69 1 969 337 276 167 30 chrX 50368467 50368635 -116281661 - MLT1E1A LTR MaLR -199 481 291 1 969 894 167 54 27 chrX 50368821 50369006 -116281290 + B2_Mm2 SINE B2 2 191 -4 1 969 299 384 0 29 chrX 50369092 50369194 -116281102 + ID_B1 SINE B4 78 176 -48 1 969 499 250 0 36 chrX 50369105 50369217 -116281079 + PB1D10 SINE Alu 10 117 0 1 969 635 192 100 0 chrX 50369882 50370002 -116280294 + RSINE1 SINE B4 3 134 -31 1 969 261 240 297 10 chrX 50370031 50370132 -116280164 - MER2 DNA MER2_type -86 259 130 1 969 678 345 56 19 chrX 50370227 50370493 -116279803 - B4 SINE B4 -16 276 1 1 969 386 299 111 0 chrX 50370863 50370980 -116279316 - MIR SINE MIR -110 152 23 1 969 1418 75 5 5 chrX 50371175 50371364 -116278932 - B2_Mm2 SINE B2 -6 189 1 1 969 266 286 86 43 chrX 50371415 50371554 -116278742 - RSINE1 SINE B4 -17 148 4 1 969 359 255 101 7 chrX 50371813 50371951 -116278345 + L1MD2 LINE L1 5539 5689 -553 1 969 495 226 9 36 chrX 50371960 50372070 -116278226 + PB1D7 SINE Alu 1 107 -13 1 969 300 155 150 24 chrX 50372375 50372466 -116277830 + L1MD2 LINE L1 5906 6012 -230 1 969 309 269 45 0 chrX 50372919 50372986 -116277310 + ID4_ SINE ID 13 82 -1 1 969 351 178 269 29 chrX 50375439 50375543 -116274753 + RSINE1 SINE B4 4 132 -33 1 969 1144 82 0 13 chrX 50375938 50376087 -116274209 - B1_Mm SINE Alu 0 147 1 1 969 198 226 31 46 chrX 50376094 50376159 -116274137 + L2a LINE L2 3264 3327 -99 1 969 657 230 0 28 chrX 50376169 50376312 -116273984 - B1_Mur2 SINE Alu -9 140 2 1 969 261 254 53 13 chrX 50376336 50376441 -116273855 - PB1D9 SINE Alu 0 120 11 1 969 1075 128 6 6 chrX 50376501 50376666 -116273630 + B2_Mm1t SINE B2 1 165 -28 1 969 315 146 0 35 chrX 50376725 50376782 -116273514 + B2_Mm2 SINE B2 47 101 -94 1 969 288 0 0 0 chrX 50376806 50376838 -116273458 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1 969 589 234 34 7 chrX 50377005 50377151 -116273145 - RSINE1 SINE B4 -13 152 3 1 969 202 128 64 0 chrX 50377158 50377205 -116273091 + T-rich Low_complexity Low_complexity 4 53 0 1 969 1203 61 0 0 chrX 50377206 50377354 -116272942 - B1_Mus1 SINE Alu 0 148 1 1 969 415 137 232 0 chrX 50377409 50377504 -116272792 + B2_Mm2 SINE B2 79 195 0 1 969 605 87 0 71 chrX 50377506 50377605 -116272691 + B2_Mm2 SINE B2 2 93 -102 1 969 532 131 206 0 chrX 50377662 50377769 -116272527 + B2_Mm2 SINE B2 67 195 0 1 969 567 256 143 6 chrX 50378137 50378298 -116271998 - ID_B1 SINE B4 -41 183 1 1 969 1026 84 77 135 chrX 50378746 50378953 -116271343 + B2_Mm2 SINE B2 1 195 0 1 969 348 95 352 28 chrX 50379384 50379492 -116270804 - B2_Mm2 SINE B2 -6 189 47 1 969 1296 91 11 0 chrX 50379505 50379681 -116270615 - B2_Mm1t SINE B2 -15 178 1 1 969 24 32 0 0 chrX 50379996 50380027 -116270269 + AT_rich Low_complexity Low_complexity 1 31 0 1 969 268 213 47 47 chrX 50380099 50380163 -116270133 - ID4_ SINE ID -18 65 2 1 969 998 76 0 0 chrX 50380257 50380388 -116269908 - B2_Mm2 SINE B2 -64 131 1 1 969 373 247 0 13 chrX 50380388 50380465 -116269831 + ID_B1 SINE B4 143 218 -6 1 969 424 284 16 39 chrX 50380493 50380621 -116269675 + PB1 SINE Alu 1 125 -2 1 969 351 0 0 0 chrX 50380709 50380748 -116269548 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 1 969 506 296 32 0 chrX 50380985 50381110 -116269186 - RSINE1 SINE B4 -34 131 3 1 969 21 82 0 0 chrX 50381110 50381159 -116269137 + AT_rich Low_complexity Low_complexity 1 49 0 1 969 510 249 160 57 chrX 50381695 50381870 -116268426 - LTR75 LTR ERVL -230 332 140 1 969 734 246 95 5 chrX 50381961 50382161 -116268135 - MER2 DNA MER2_type -120 225 8 1 969 427 271 25 17 chrX 50382295 50382415 -116267881 - MIR SINE MIR -113 149 29 1 969 293 47 0 23 chrX 50383047 50383091 -116267205 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 969 485 285 88 102 chrX 50383093 50383367 -116266929 - B4A SINE B4 -18 274 5 1 969 727 274 91 87 chrX 50383425 50383798 -116266498 - L1MC4a LINE L1 -1006 6876 6533 1 969 499 264 30 59 chrX 50383798 50383967 -116266329 - RSINE1 SINE B4 0 165 2 1 969 727 274 91 87 chrX 50383967 50384189 -116266107 - L1MC4a LINE L1 -1350 6532 6279 1 969 559 0 28 0 chrX 50384435 50384506 -116265790 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 1 969 745 175 0 116 chrX 50384506 50384661 -116265635 - B1_Mur1 SINE Alu -11 138 2 1 969 711 236 20 26 chrX 50384784 50384936 -116265360 + RSINE1 SINE B4 15 165 0 1 969 301 286 45 45 chrX 50385250 50385360 -116264936 - ID_B1 SINE B4 -5 219 110 1 969 237 232 0 42 chrX 50385414 50385486 -116264810 + tRNA-Ala-GCY_ tRNA tRNA 5 73 -2 1 969 2318 42 0 3 chrX 50385501 50385787 -116264509 - L1Md_F3 LINE L1 0 6584 6300 1 969 299 261 0 0 chrX 50385791 50385856 -116264440 + RSINE1 SINE B4 75 139 -26 1 969 266 191 78 16 chrX 50386160 50386224 -116264072 + B1F SINE Alu 82 149 0 1 969 770 105 9 0 chrX 50386423 50386537 -116263759 - B1_Mur4 SINE Alu 0 150 36 1 969 3459 30 0 0 chrX 50386752 50387148 -116263148 + MTA_Mm LTR MaLR 1 396 0 1 969 912 160 7 0 chrX 50387216 50387360 -116262936 + B1_Mur4 SINE Alu 6 150 0 1 969 400 184 19 0 chrX 50387360 50387463 -116262833 + GA-rich Low_complexity Low_complexity 4 108 0 1 969 213 39 0 0 chrX 50387527 50387553 -116262743 + (GGAA)n Simple_repeat Simple_repeat 1 26 0 1 969 270 81 0 0 chrX 50387606 50387643 -116262653 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 1 969 347 234 308 0 chrX 50388068 50388175 -116262121 - ID_B1 SINE B4 -8 216 77 1 969 335 229 0 14 chrX 50388178 50388249 -116262047 - ID2 SINE ID -11 72 3 1 969 922 174 101 15 chrX 50388360 50388558 -116261738 + B3 SINE B2 2 216 0 1 969 396 346 6 42 chrX 50389028 50389194 -116261102 + MTE2b LTR MaLR 21 180 -199 1 969 655 261 34 6 chrX 50389198 50389375 -116260921 + B3A SINE B2 2 183 -15 1 969 261 0 0 0 chrX 50389461 50389490 -116260806 + (T)n Simple_repeat Simple_repeat 1 29 0 1 969 1045 52 0 0 chrX 50389506 50389642 -116260654 - B1_Mus1 SINE Alu 0 148 13 1 969 572 192 38 23 chrX 50389630 50389763 -116260533 + B1_Mur1 SINE Alu 6 140 -9 1 969 407 246 16 95 chrX 50389796 50389922 -116260374 + MTE2b LTR MaLR 172 287 -92 1 969 626 135 10 0 chrX 50389907 50390011 -116260285 - B2_Mm2 SINE B2 -90 105 1 1 969 786 193 0 0 chrX 50390145 50390280 -116260016 - ID_B1 SINE B4 -7 217 83 1 969 1141 202 14 18 chrX 50390348 50390570 -116259726 + ID_B1 SINE B4 2 222 -2 1 969 1079 159 28 28 chrX 50390582 50390795 -116259501 + B3 SINE B2 1 213 -3 1 969 285 258 56 0 chrX 50391582 50391671 -116258625 + MLT1B LTR MaLR 1 94 -296 1 969 436 284 0 10 chrX 50391855 50391958 -116258338 - B1_Mur3 SINE Alu -40 109 8 1 969 267 103 0 0 chrX 50391974 50392013 -116258283 + (TTCC)n Simple_repeat Simple_repeat 2 40 0 1 969 728 215 0 13 chrX 50392034 50392185 -116258111 - B1_Mur2 SINE Alu 0 149 1 1 969 250 151 54 54 chrX 50392188 50392244 -116258052 - PB1D7 SINE Alu 0 120 65 1 969 685 189 0 8 chrX 50392194 50392327 -116257969 - ID_B1 SINE B4 -3 221 90 1 969 1363 66 76 0 chrX 50392362 50392560 -116257736 - Lx LINE L1 -3 6651 6439 1 969 535 245 64 13 chrX 50392911 50393068 -116257228 + L1MC5 LINE L1 6677 6841 -1120 1 969 401 304 0 0 chrX 50393117 50393229 -116257067 + PB1D10 SINE Alu 6 117 0 1 969 180 0 0 0 chrX 50393315 50393335 -116256961 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 969 30 0 0 0 chrX 50393396 50393426 -116256870 + AT_rich Low_complexity Low_complexity 1 30 0 1 969 486 250 53 111 chrX 50393428 50393482 -116256814 - RSINE1 SINE B4 0 165 130 1 969 809 110 55 61 chrX 50393482 50393646 -116256650 + Lx2B LINE L1 6838 7000 0 1 969 486 250 53 111 chrX 50393646 50393762 -116256534 - RSINE1 SINE B4 -36 129 5 1 969 843 192 0 0 chrX 50393775 50393947 -116256349 + CT-rich Low_complexity Low_complexity 4 175 0 1 969 525 252 37 0 chrX 50393949 50394084 -116256212 - B1F SINE Alu -1 148 9 1 969 21 0 0 0 chrX 50394132 50394153 -116256143 + AT_rich Low_complexity Low_complexity 1 21 0 1 969 345 197 0 0 chrX 50394336 50394412 -116255884 + (TG)n Simple_repeat Simple_repeat 1 76 0 1 969 210 245 102 0 chrX 50394417 50394466 -116255830 - B1F SINE Alu 0 149 96 1 969 1088 254 36 4 chrX 50394561 50394841 -116255455 - B4A SINE B4 -2 290 2 1 969 1731 87 108 0 chrX 50395175 50395463 -116254833 - ORR1A2 LTR MaLR -8 319 1 1 969 327 25 0 0 chrX 50395852 50395892 -116254404 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 1 969 382 200 50 71 chrX 50395949 50396089 -116254207 + B1F SINE Alu 13 149 0 1 969 464 232 102 137 chrX 50396095 50396300 -116253996 + B3A SINE B2 1 198 0 1 969 378 306 27 20 chrX 50396363 50396510 -116253786 + RSINE1 SINE B4 16 163 -2 1 969 973 212 39 5 chrX 50396547 50396751 -116253545 + B3 SINE B2 1 211 -5 1 969 1161 61 0 33 chrX 50397186 50397199 -116253097 - B1_Mus1 SINE Alu 0 148 140 1 969 225 0 0 0 chrX 50397199 50397224 -116253072 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 969 1161 61 0 33 chrX 50397224 50397363 -116252933 - B1_Mus1 SINE Alu -9 139 1 1 969 227 215 45 30 chrX 50397459 50397526 -116252770 + CT-rich Low_complexity Low_complexity 5 72 0 1 969 187 233 30 91 chrX 50397599 50397665 -116252631 - MIR3 SINE MIR -43 165 104 1 969 847 152 22 0 chrX 50397758 50397896 -116252400 + B1_Mur1 SINE Alu 1 141 -8 1 969 231 88 0 0 chrX 50397908 50397942 -116252354 + (CCA)n Simple_repeat Simple_repeat 2 35 0 1 969 613 226 23 0 chrX 50399670 50399803 -116250493 + RSINE1 SINE B4 2 137 -28 1 969 551 235 0 25 chrX 50400465 50400587 -116249709 - B4 SINE B4 -6 286 168 1 969 415 252 28 49 chrX 50400815 50400957 -116249339 + B1_Mur1 SINE Alu 1 139 -10 1 969 229 293 24 72 chrX 50401918 50402043 -116248253 + ID_B1 SINE B4 106 224 0 1 969 225 0 0 0 chrX 50402183 50402208 -116248088 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1 969 241 220 0 0 chrX 50403681 50403731 -116246565 + G-rich Low_complexity Low_complexity 1 50 0 1 969 198 0 0 0 chrX 50404974 50404996 -116245300 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 1 969 23 0 0 0 chrX 50408429 50408452 -116241844 + AT_rich Low_complexity Low_complexity 1 23 0 1 969 234 241 8 57 chrX 50410205 50410328 -116239968 + (GGCTG)n Simple_repeat Simple_repeat 5 121 0 1 969 629 175 57 21 chrX 50411377 50411517 -116238779 + ID_B1 SINE B4 80 224 0 1 969 468 0 0 0 chrX 50412481 50412533 -116237763 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 969 21 0 0 0 chrX 50414998 50415019 -116235277 + AT_rich Low_complexity Low_complexity 1 21 0 1 969 249 224 169 13 chrX 50415057 50415134 -116235162 + PB1D10 SINE Alu 29 117 0 1 969 262 257 39 39 chrX 50415228 50415305 -116234991 - ID2 SINE ID -2 81 5 1 969 313 208 78 0 chrX 50415418 50415495 -116234801 - PB1D10 SINE Alu 0 117 35 1 969 1193 124 38 0 chrX 50416206 50416391 -116233905 - B2_Mm2 SINE B2 -3 192 1 1 969 879 236 48 29 chrX 50416715 50416924 -116233372 - ID_B1 SINE B4 -7 217 5 1 969 864 217 136 83 chrX 50417270 50417507 -116232789 + MTE2b LTR MaLR 59 327 -52 1 969 644 300 21 10 chrX 50417507 50417699 -116232597 - B3A SINE B2 -2 196 3 1 969 864 217 136 83 chrX 50417699 50417763 -116232533 + MTE2b LTR MaLR 328 376 -3 1 969 1247 41 0 0 chrX 50417887 50418034 -116232262 + B1_Mus1 SINE Alu 2 148 0 1 969 215 158 0 26 chrX 50418126 50418165 -116232131 + A-rich Low_complexity Low_complexity 2 39 0 1 969 228 86 0 0 chrX 50418399 50418434 -116231862 - BC1_Mm scRNA scRNA -117 35 1 1 969 331 329 40 13 chrX 50418651 50418802 -116231494 + RSINE1 SINE B4 9 163 -2 1 969 1337 78 33 0 chrX 50418825 50419005 -116231291 - B2_Mm2 SINE B2 -8 187 2 1 969 21 36 0 0 chrX 50419005 50419033 -116231263 + AT_rich Low_complexity Low_complexity 1 28 0 1 969 514 289 7 27 chrX 50419100 50419246 -116231050 + RSINE1 SINE B4 8 150 -15 1 969 243 204 0 0 chrX 50419299 50419353 -116230943 + (TATATG)n Simple_repeat Simple_repeat 5 58 0 1 969 413 222 0 12 chrX 50419455 50419537 -116230759 - ID4_ SINE ID -1 82 2 1 969 215 204 20 0 chrX 50419878 50419927 -116230369 + B3 SINE B2 2 51 -165 1 969 294 29 0 0 chrX 50420182 50420217 -116230079 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 969 829 231 16 41 chrX 50420236 50420430 -116229866 + Lx8 LINE L1 7050 7238 -235 1 969 491 260 83 59 chrX 50421132 50421336 -116228960 - B3A SINE B2 0 216 8 1 969 1235 26 7 0 chrX 50421486 50421637 -116228659 + (TTTC)n Simple_repeat Simple_repeat 2 153 0 1 969 1123 52 0 0 chrX 50421638 50421772 -116228524 - B1_Mm SINE Alu -12 135 2 1 969 2884 52 11 0 chrX 50421782 50422146 -116228150 - L1Md_F2 LINE L1 0 6582 6215 1 969 441 0 0 0 chrX 50422198 50422247 -116228049 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 969 243 0 0 0 chrX 50424161 50424188 -116226108 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 969 621 219 20 0 chrX 50424188 50424326 -116225970 - B1F SINE Alu -7 142 2 1 969 851 105 8 0 chrX 50424378 50424511 -116225785 + (TCCC)n Simple_repeat Simple_repeat 4 137 0 1 969 228 35 0 0 chrX 50424717 50424746 -116225550 + (T)n Simple_repeat Simple_repeat 1 29 0 1 969 573 226 43 0 chrX 50424828 50424943 -116225353 - RSINE1 SINE B4 -40 125 6 1 969 387 0 0 0 chrX 50425336 50425379 -116224917 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 969 191 128 26 0 chrX 50425904 50425943 -116224353 - L2a LINE L2 -1 3425 3386 1 969 224 154 31 0 chrX 50426334 50426399 -116223897 + (CAGAGA)n Simple_repeat Simple_repeat 6 72 0 1 969 756 129 0 0 chrX 50426483 50426607 -116223689 + (TCCC)n Simple_repeat Simple_repeat 1 124 0 1 969 450 289 82 21 chrX 50428152 50428346 -116221950 + B4A SINE B4 2 207 -85 1 969 604 271 164 18 chrX 50428464 50428738 -116221558 - MER2 DNA MER2_type 0 345 32 1 969 1258 157 23 0 chrX 50428840 50429057 -116221239 + URR1A DNA MER1_type 1 222 -4 1 969 397 262 69 55 chrX 50428888 50429090 -116221206 - CYRA11_Mm Unknown Y-chromosome -272 345 141 1 969 739 207 14 0 chrX 50429274 50429419 -116220877 - B1_Mur1 SINE Alu 0 149 3 1 969 423 52 0 0 chrX 50429935 50429993 -116220303 + (CAGAGA)n Simple_repeat Simple_repeat 3 60 0 1 969 720 202 30 24 chrX 50432088 50432255 -116218041 - B3 SINE B2 -5 211 44 1 969 181 320 0 0 chrX 50432261 50432311 -116217985 + MIRb SINE MIR 207 256 -12 1 969 257 286 0 32 chrX 50432317 50432337 -116217959 + (CATATA)n Simple_repeat Simple_repeat 2 21 0 1 969 826 259 18 151 chrX 50432337 50432674 -116217622 + B4A SINE B4 1 292 0 1 969 257 286 0 32 chrX 50432674 50432747 -116217549 + (CATATA)n Simple_repeat Simple_repeat 4 74 0 1 969 215 188 49 12 chrX 50433487 50433568 -116216728 + (TA)n Simple_repeat Simple_repeat 1 84 0 1 969 24 0 0 0 chrX 50433804 50433828 -116216468 + AT_rich Low_complexity Low_complexity 1 24 0 1 969 407 236 173 0 chrX 50433828 50433938 -116216358 + B1_Mur2 SINE Alu 19 147 -2 1 969 912 277 87 70 chrX 50434140 50434567 -116215729 + MLT1C LTR MaLR 4 437 -30 1 969 351 0 0 0 chrX 50434956 50434995 -116215301 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 969 819 280 55 25 chrX 50434996 50435271 -116215025 - B4A SINE B4 -8 284 2 1 969 474 314 22 7 chrX 50435288 50435426 -116214870 - B1F1 SINE Alu -2 147 8 1 969 336 48 0 0 chrX 50436963 50437005 -116213291 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 1 969 317 299 56 62 chrX 50437082 50437260 -116213036 - MIRb SINE MIR -27 241 65 1 969 399 266 54 61 chrX 50437275 50437291 -116213005 + B4 SINE B4 72 86 -206 1 969 657 194 57 7 chrX 50437291 50437431 -116212865 + B1_Mur2 SINE Alu 2 148 -1 1 969 456 67 0 0 chrX 50437723 50437783 -116212513 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 1 969 1085 312 21 11 chrX 50437805 50438090 -116212206 - B4A SINE B4 0 292 5 1 969 417 90 0 0 chrX 50438524 50438591 -116211705 + (GGGAGA)n Simple_repeat Simple_repeat 6 72 0 1 969 26 30 0 0 chrX 50439341 50439374 -116210922 + AT_rich Low_complexity Low_complexity 1 33 0 1 969 207 0 0 0 chrX 50439429 50439452 -116210844 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 969 351 217 72 0 chrX 50439648 50439731 -116210565 - B1F SINE Alu -60 89 1 1 969 223 219 92 15 chrX 50439677 50439742 -116210554 - B4A SINE B4 -147 145 76 1 969 478 235 75 8 chrX 50440255 50440375 -116209921 + B1F1 SINE Alu 22 149 0 1 969 251 223 92 67 chrX 50440442 50440615 -116209681 + MIRm SINE MIR 71 263 -5 1 969 364 229 0 0 chrX 50443150 50443220 -116207076 - ID4 SINE ID 0 83 14 1 969 334 243 38 19 chrX 50443302 50443407 -116206889 + B1F SINE Alu 32 138 -11 1 969 221 276 53 0 chrX 50443427 50443503 -116206793 + ID4 SINE ID 4 83 0 1 969 252 0 0 0 chrX 50443730 50443758 -116206538 + (A)n Simple_repeat Simple_repeat 1 28 0 1 969 272 252 18 36 chrX 50444048 50444159 -116206137 - L1MA5 LINE L1 0 6300 6192 1 969 600 182 18 0 chrX 50444223 50444333 -116205963 - B1_Mur1 SINE Alu -1 148 37 1 969 2014 192 52 28 chrX 50446565 50447030 -116203266 - L1MDa LINE L1 -457 6176 5701 1 969 252 0 0 0 chrX 50447042 50447070 -116203226 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 969 394 277 0 0 chrX 50447159 50447253 -116203043 - PB1D10 SINE Alu -3 114 21 1 969 780 192 250 0 chrX 50447291 50447463 -116202833 - B3 SINE B2 -1 215 1 1 969 887 111 30 0 chrX 50447515 50447650 -116202646 - B1_Mur4 SINE Alu -7 143 5 1 969 245 269 127 30 chrX 50447721 50447855 -116202441 - L1MDa LINE L1 -1049 5488 5342 1 969 260 313 0 15 chrX 50447977 50448045 -116202251 + RSINE1 SINE B4 86 152 -13 1 969 536 245 106 0 chrX 50448069 50448257 -116202039 - L1MDa LINE L1 -1239 5298 5091 1 969 400 186 85 38 chrX 50448441 50448547 -116201749 - L1MDa LINE L1 -6520 113 3 1 969 200 305 0 17 chrX 50448855 50448915 -116201381 + L2b LINE L2 3316 3374 -1 1 969 627 282 118 0 chrX 50449002 50449197 -116201099 - B4 SINE B4 -73 219 2 1 969 282 328 40 24 chrX 50449484 50449609 -116200687 + MIR3 SINE MIR 41 167 -41 1 969 267 238 0 23 chrX 50450333 50450419 -116199877 - L1ME4a LINE L1 -71 6053 5970 1 969 342 0 0 0 chrX 50450419 50450457 -116199839 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 969 392 186 57 29 chrX 50450709 50450814 -116199482 - L1MA5 LINE L1 -2 6298 6191 1 969 531 320 36 77 chrX 50452100 50452489 -116197807 + L1ME1 LINE L1 5779 6151 -28 1 969 205 273 0 18 chrX 50452926 50452982 -116197314 + MIR3 SINE MIR 113 167 -41 1 969 612 172 0 0 chrX 50453652 50453768 -116196528 + CT-rich Low_complexity Low_complexity 3 118 0 1 969 664 244 0 0 chrX 50453788 50453923 -116196373 - RSINE1 SINE B4 -29 136 2 1 969 1466 78 10 0 chrX 50455001 50455193 -116195103 - B2_Mm2 SINE B2 -1 194 1 1 969 486 49 0 0 chrX 50455422 50455483 -116194813 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 1 969 232 309 28 93 chrX 50455487 50455594 -116194702 - PB1D10 SINE Alu -17 100 1 1 969 507 228 142 35 chrX 50455594 50455642 -116194654 - ID_B1 SINE B4 -124 100 38 1 969 551 288 151 9 chrX 50455909 50456228 -116194068 + MLT1E LTR MaLR 151 514 -139 1 969 522 262 115 57 chrX 50456431 50456727 -116193569 + L1MA4 LINE L1 5615 5927 -373 1 969 1192 264 25 0 chrX 50456848 50457128 -116193168 - B4A SINE B4 0 292 6 1 969 1472 302 22 42 chrX 50457134 50457753 -116192543 - L1M2 LINE L1 -3309 2834 2231 1 969 1500 47 11 0 chrX 50457753 50457943 -116192353 - L1Md_F3 LINE L1 0 6584 6393 1 969 1472 302 22 42 chrX 50457943 50458044 -116192252 - L1M2 LINE L1 -3913 2230 2129 1 969 410 230 0 94 chrX 50458124 50458220 -116192076 - B1_Mur1 SINE Alu -14 135 49 1 969 234 0 0 0 chrX 50458268 50458294 -116192002 + (TCC)n Simple_repeat Simple_repeat 3 28 0 1 969 483 283 26 52 chrX 50458363 50458516 -116191780 - B4 SINE B4 -63 229 81 1 969 243 0 0 0 chrX 50458516 50458543 -116191753 + (T)n Simple_repeat Simple_repeat 1 27 0 1 969 332 202 11 45 chrX 50458543 50458631 -116191665 - B4 SINE B4 -206 86 2 1 969 589 252 0 7 chrX 50458741 50458881 -116191415 - ID_B1 SINE B4 -1 223 85 1 969 186 167 0 0 chrX 50459248 50459284 -116191012 + (TAG)n Simple_repeat Simple_repeat 1 36 0 1 969 326 290 43 0 chrX 50459366 50459459 -116190837 + B1F SINE Alu 43 139 -10 1 969 254 188 14 105 chrX 50459469 50459612 -116190684 + A-rich Low_complexity Low_complexity 3 132 0 1 969 185 0 40 0 chrX 50459777 50459802 -116190494 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1 969 1029 219 14 5 chrX 50459802 50460013 -116190283 - ID_B1 SINE B4 -11 213 1 1 969 390 115 0 0 chrX 50460810 50460871 -116189425 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 969 195 186 0 0 chrX 50460871 50460914 -116189382 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 969 681 322 28 59 chrX 50460964 50461251 -116189045 - B4A SINE B4 -14 278 1 1 969 256 292 101 0 chrX 50461958 50462047 -116188249 + RSINE1 SINE B4 66 163 -2 1 969 253 286 0 0 chrX 50462275 50462331 -116187965 + B1F1 SINE Alu 2 57 -92 1 969 293 287 11 0 chrX 50462385 50462472 -116187824 + 4.5SRNA scRNA scRNA 4 91 -3 1 121 795 283 47 25 chrX 50462472 50462748 -116187548 + B4A SINE B4 2 283 -9 1 970 189 0 0 0 chrX 50462763 50462784 -116187512 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 970 568 259 50 0 chrX 50463629 50463768 -116186528 + RSINE1 SINE B4 3 148 -17 1 970 1967 251 71 14 chrX 50464112 50464234 -116186062 - L1M3 LINE L1 -1041 5099 4977 1 970 243 0 0 0 chrX 50464234 50464261 -116186035 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 970 1967 251 71 14 chrX 50464261 50464789 -116185507 - L1M3 LINE L1 -1164 4976 4414 1 970 506 168 101 18 chrX 50465207 50465316 -116184980 - MIRb SINE MIR -65 203 86 1 970 313 258 52 104 chrX 50465683 50465856 -116184440 - Charlie4z DNA MER1_type 0 167 4 1 970 241 204 18 18 chrX 50467336 50467391 -116182905 + CT-rich Low_complexity Low_complexity 4 58 0 1 970 193 303 43 33 chrX 50468690 50468782 -116181514 + MIRb SINE MIR 60 152 -116 1 970 330 302 45 48 chrX 50469376 50469603 -116180693 - MIR SINE MIR -28 240 9 1 970 827 220 89 0 chrX 50470526 50470694 -116179602 - B3 SINE B2 -32 184 2 1 970 180 0 0 0 chrX 50470705 50470725 -116179571 + (GTTTG)n Simple_repeat Simple_repeat 2 21 0 1 970 695 169 5 0 chrX 50472535 50472724 -116177572 + CT-rich Low_complexity Low_complexity 1 190 0 1 970 966 275 78 10 chrX 50472764 50473072 -116177224 + MER2 DNA MER2_type 2 330 -15 1 970 283 298 11 0 chrX 50473129 50473223 -116177073 + L2a LINE L2 3326 3420 -6 1 970 695 154 97 62 chrX 50474082 50474227 -116176069 + B1_Mur4 SINE Alu 1 150 0 1 970 693 276 102 29 chrX 50474251 50474456 -116175840 - ID_B1 SINE B4 -3 221 2 1 970 188 225 50 0 chrX 50474997 50475052 -116175244 + MIRc SINE MIR 94 152 -56 1 970 294 222 0 14 chrX 50475119 50475192 -116175104 + MIRb SINE MIR 195 266 -2 1 970 513 204 0 44 chrX 50476001 50476114 -116174182 + B1F2 SINE Alu 42 149 0 1 970 22 56 0 0 chrX 50476114 50476150 -116174146 + AT_rich Low_complexity Low_complexity 1 36 0 1 970 462 278 8 25 chrX 50476802 50476920 -116173376 + PB1D10 SINE Alu 1 116 -1 1 970 818 124 71 21 chrX 50477247 50477387 -116172909 + B1_Mur4 SINE Alu 3 149 -1 1 970 770 285 33 22 chrX 50478170 50478446 -116171850 + L1MB4 LINE L1 5900 6178 -2 1 970 225 0 0 0 chrX 50478803 50478828 -116171468 + (CAA)n Simple_repeat Simple_repeat 1 25 0 1 970 242 214 0 0 chrX 50478857 50478913 -116171383 + B4 SINE B4 237 292 0 1 970 254 200 0 32 chrX 50478913 50478975 -116171321 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 970 24 0 0 0 chrX 50479645 50479669 -116170627 + GC_rich Low_complexity Low_complexity 1 24 0 1 970 192 316 25 12 chrX 50481576 50481656 -116168640 + MIR SINE MIR 27 107 -101 1 970 454 296 9 0 chrX 50481768 50481876 -116168420 + PB1D10 SINE Alu 1 109 -8 1 970 798 238 63 67 chrX 50482061 50482376 -116167920 - L1MB8 LINE L1 0 6178 5865 1 970 246 286 121 57 chrX 50484336 50484477 -116165819 + ID_B1 SINE B4 73 222 -2 1 970 388 226 126 24 chrX 50484354 50484481 -116165815 + B1F SINE Alu 9 148 -1 1 970 755 286 51 61 chrX 50484620 50484914 -116165382 - L2b LINE L2 -31 3344 3054 1 970 639 39 0 0 chrX 50485062 50485140 -116165156 + (CAAAG)n Simple_repeat Simple_repeat 2 79 0 1 970 242 298 30 22 chrX 50485604 50485738 -116164558 + L1M5 LINE L1 3796 3930 -2216 1 970 462 256 32 16 chrX 50485782 50485905 -116164391 + B1F SINE Alu 18 142 -7 1 970 2853 132 23 5 chrX 50485907 50486341 -116163955 + Lx4A LINE L1 6617 7058 0 1 970 452 69 56 0 chrX 50486411 50486483 -116163813 + B1_Mur3 SINE Alu 73 148 -1 1 970 360 209 30 47 chrX 50486615 50486741 -116163555 + MIR SINE MIR 27 159 -117 1 970 375 278 9 36 chrX 50486857 50486969 -116163327 + PB1 SINE Alu 19 127 0 1 970 420 231 11 11 chrX 50487336 50487428 -116162868 - RSINE1 SINE B4 -33 132 41 1 970 580 239 92 6 chrX 50487971 50488135 -116162161 - ID_B1 SINE B4 -12 212 35 1 970 767 240 116 62 chrX 50488645 50488920 -116161376 + B4A SINE B4 1 290 -2 1 970 211 309 0 0 chrX 50489262 50489317 -116160979 + MIRc SINE MIR 154 208 -60 1 970 347 56 19 0 chrX 50489909 50489963 -116160333 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 1 970 870 19 0 0 chrX 50490612 50490716 -116159580 + (GA)n Simple_repeat Simple_repeat 1 104 0 1 970 636 50 0 0 chrX 50491187 50491267 -116159029 + (GA)n Simple_repeat Simple_repeat 1 80 0 1 970 792 332 41 10 chrX 50491503 50491795 -116158501 + RCHARR1 DNA MER1_type 34 334 -640 1 970 1113 208 22 15 chrX 50491793 50491999 -116158297 + RCHARR1 DNA MER1_type 686 888 -86 1 970 1401 237 87 31 chrX 50491999 50492356 -116157940 + MTE2a LTR MaLR 1 377 -2 1 970 1113 208 22 15 chrX 50492356 50492422 -116157874 + RCHARR1 DNA MER1_type 889 958 -16 1 970 1752 188 24 24 chrX 50492652 50493028 -116157268 + MER63B DNA AcHobo 51 426 -10 1 970 210 105 0 0 chrX 50494113 50494151 -116156145 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 970 691 146 130 0 chrX 50494628 50494751 -116155545 - B1_Mur4 SINE Alu -11 139 1 1 970 477 0 0 0 chrX 50495189 50495242 -116155054 + (TATG)n Simple_repeat Simple_repeat 4 56 0 1 970 394 309 0 1 chrX 50495676 50495779 -116154517 + PB1D7 SINE Alu 11 112 -8 1 970 24 0 0 0 chrX 50496244 50496268 -116154028 + AT_rich Low_complexity Low_complexity 1 24 0 1 970 289 336 19 9 chrX 50496979 50497087 -116153209 + Tigger13a DNA MER2_type 1 109 -662 1 970 21 36 0 0 chrX 50497224 50497252 -116153044 + AT_rich Low_complexity Low_complexity 1 28 0 1 970 21 0 0 0 chrX 50497413 50497434 -116152862 + AT_rich Low_complexity Low_complexity 1 21 0 1 970 642 60 0 0 chrX 50497860 50497943 -116152353 + (GGGAGA)n Simple_repeat Simple_repeat 3 85 0 1 970 273 342 0 12 chrX 50498044 50498124 -116152172 + ID4_ SINE ID 4 82 -1 1 970 431 284 39 69 chrX 50499312 50499340 -116150956 - L1MA4 LINE L1 -374 5926 5909 1 970 1436 80 0 5 chrX 50499340 50499540 -116150756 - L1_Mus2 LINE L1 0 6566 6368 1 970 431 284 39 69 chrX 50499540 50499715 -116150581 - L1MA4 LINE L1 -392 5908 5729 1 970 203 288 27 0 chrX 50500175 50500248 -116150048 - MIRc SINE MIR -112 156 82 1 970 2424 127 29 18 chrX 50500418 50500803 -116149493 + Lx4A LINE L1 6666 7054 -4 2 970 594 75 0 0 chrX 50500818 50500898 -116149398 + (GAAAA)n Simple_repeat Simple_repeat 2 81 0 3 970 324 0 0 0 chrX 50501246 50501282 -116149014 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 970 258 32 0 0 chrX 50501644 50501675 -116148621 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 970 313 294 0 34 chrX 50501958 50502046 -116148250 - PB1D10 SINE Alu 0 117 33 6 970 397 266 106 0 chrX 50502309 50502422 -116147874 + PB1 SINE Alu 3 127 0 7 970 605 282 55 22 chrX 50502834 50503015 -116147281 - B4 SINE B4 0 292 106 8 970 183 80 0 0 chrX 50503028 50503053 -116147243 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 9 970 199 274 226 0 chrX 50503121 50503205 -116147091 - MIRb SINE MIR -113 155 53 1 970 216 97 0 0 chrX 50503441 50503472 -116146824 + (CAATA)n Simple_repeat Simple_repeat 3 33 0 1 970 232 256 54 90 chrX 50503571 50503738 -116146558 + L1MEd LINE L1 947 1107 -5012 1 970 238 288 14 14 chrX 50503744 50503818 -116146478 - B3A SINE B2 -64 134 61 1 970 321 100 0 0 chrX 50504151 50504201 -116146095 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 1 970 258 267 0 26 chrX 50504677 50504754 -116145542 + GA-rich Low_complexity Low_complexity 2 76 0 1 970 475 263 68 43 chrX 50504904 50505067 -116145229 + MER63C DNA AcHobo 237 403 -527 1 970 479 269 8 8 chrX 50505215 50505335 -116144961 - PB1D9 SINE Alu 0 120 1 1 970 723 335 44 21 chrX 50505388 50505726 -116144570 + MER63C DNA AcHobo 424 769 -161 1 970 377 217 202 0 chrX 50506460 50506589 -116143707 - MER5A DNA MER1_type -4 185 31 1 970 192 231 0 0 chrX 50506864 50506916 -116143380 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 970 454 352 59 25 chrX 50506951 50507155 -116143141 - B4 SINE B4 -8 284 74 2 970 747 157 7 54 chrX 50507144 50507292 -116143004 - B1_Mus2 SINE Alu -6 141 1 2 970 652 264 43 16 chrX 50507292 50507368 -116142928 - B4 SINE B4 -202 90 10 2 970 832 192 119 0 chrX 50507633 50507826 -116142470 + B3 SINE B2 1 216 0 2 970 299 303 0 8 chrX 50507882 50508149 -116142147 + (CA)n Simple_repeat Simple_repeat 1 264 0 2 970 239 264 11 33 chrX 50508185 50508275 -116142021 + L1ME3 LINE L1 5911 5998 -164 2 970 243 336 27 34 chrX 50508479 50508627 -116141669 - L1ME3 LINE L1 -6 6156 6010 2 970 228 351 52 17 chrX 50508639 50508755 -116141541 + ORR1E LTR MaLR 1 120 -239 2 970 665 56 11 0 chrX 50509094 50509184 -116141112 + (TC)n Simple_repeat Simple_repeat 1 91 0 2 970 1004 112 7 0 chrX 50509186 50509329 -116140967 - B1_Mus1 SINE Alu 0 148 5 2 970 435 174 0 0 chrX 50509376 50509462 -116140834 + CT-rich Low_complexity Low_complexity 5 90 0 3 970 409 363 65 30 chrX 50509847 50510157 -116140139 - LTR16B1 LTR ERVL -148 332 5 3 970 2260 256 66 22 chrX 50510861 50512075 -116138221 + L1MB7 LINE L1 4823 6103 -81 3 970 264 312 71 0 chrX 50512528 50512640 -116137656 + L1M5 LINE L1 5450 5569 -604 3 970 188 239 90 0 chrX 50512757 50512824 -116137472 - MIR3 SINE MIR -15 193 121 3 970 270 336 48 0 chrX 50513826 50513951 -116136345 + MIR SINE MIR 46 176 -86 3 970 226 297 32 41 chrX 50515725 50515848 -116134448 + L3 LINE CR1 3707 3828 -661 3 970 272 278 0 82 chrX 50516078 50516176 -116134120 + L2a LINE L2 3336 3425 -1 3 970 708 191 8 0 chrX 50517279 50517410 -116132886 + B1F SINE Alu 1 132 -17 3 970 640 300 0 7 chrX 50517425 50517576 -116132720 + RSINE1 SINE B4 2 151 -14 3 970 465 192 191 6 chrX 50518514 50518626 -116131670 + Lx9 LINE L1 7421 7550 -94 4 970 192 40 0 0 chrX 50518626 50518651 -116131645 + (GA)n Simple_repeat Simple_repeat 1 25 0 4 970 465 192 191 6 chrX 50518651 50518721 -116131575 + Lx9 LINE L1 7551 7637 -7 4 970 284 271 137 16 chrX 50520765 50520889 -116129407 + MIR SINE MIR 1 139 -123 4 970 561 255 30 65 chrX 50520917 50521085 -116129211 - RSINE1 SINE B4 0 165 4 4 970 324 229 60 0 chrX 50521497 50521580 -116128716 - L2b LINE L2 -1 3374 3287 4 970 654 216 44 15 chrX 50521790 50521950 -116128346 + B3A SINE B2 8 194 -22 4 970 247 253 25 25 chrX 50522185 50522266 -116128030 - MTEa LTR MaLR -23 356 276 4 970 257 380 0 0 chrX 50522269 50522369 -116127927 + L2 LINE L2 2982 3081 -338 4 970 1135 296 0 0 chrX 50522477 50522741 -116127555 + B4A SINE B4 9 272 -20 4 970 750 109 0 0 chrX 50522761 50522889 -116127407 + (CA)n Simple_repeat Simple_repeat 1 128 0 4 970 533 206 107 22 chrX 50523116 50523354 -116126942 - L1MA4 LINE L1 -282 6018 5762 5 970 243 0 0 0 chrX 50523448 50523475 -116126821 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 970 211 252 80 18 chrX 50524400 50524513 -116125783 + L2a LINE L2 3307 3426 0 5 970 830 137 7 14 chrX 50524649 50524790 -116125506 - B1_Mur4 SINE Alu -1 149 10 5 970 196 87 42 42 chrX 50525184 50525232 -116125064 + (CAGAGA)n Simple_repeat Simple_repeat 1 48 0 5 970 1123 89 105 23 chrX 50525883 50526055 -116124241 + B2_Mm2 SINE B2 2 187 -8 5 970 272 221 111 12 chrX 50526413 50526518 -116123778 + PB1D9 SINE Alu 24 149 0 5 970 2651 73 23 0 chrX 50527387 50527731 -116122565 + L1_Mus1 LINE L1 6216 6567 0 5 970 25 0 0 0 chrX 50527731 50527756 -116122540 + AT_rich Low_complexity Low_complexity 1 25 0 5 970 249 329 74 14 chrX 50528228 50528376 -116121920 + MIR3 SINE MIR 37 193 -15 5 970 1101 208 0 19 chrX 50528542 50528753 -116121543 + B3 SINE B2 3 209 -7 6 970 27 0 0 0 chrX 50528754 50528781 -116121515 + AT_rich Low_complexity Low_complexity 1 27 0 6 970 311 330 100 39 chrX 50532353 50532384 -116117912 - MamRep137 DNA TcMar? -168 276 245 6 970 350 248 71 27 chrX 50532384 50532496 -116117800 - PB1D10 SINE Alu 0 117 1 6 970 311 330 100 39 chrX 50532496 50532644 -116117652 - MamRep137 DNA TcMar? -200 244 86 6 970 236 288 0 59 chrX 50532642 50532654 -116117642 - ID2 SINE ID 0 83 4 6 970 261 292 0 14 chrX 50532654 50532727 -116117569 - ID SINE ID -149 75 4 6 970 218 260 95 14 chrX 50534211 50534285 -116116011 - MER5A DNA MER1_type -108 81 2 6 970 515 241 73 68 chrX 50534645 50534836 -116115460 + MER53 DNA hAT 1 192 -1 6 970 249 167 0 0 chrX 50535364 50535406 -116114890 + B1F SINE Alu 100 141 -8 6 970 246 227 98 152 chrX 50535577 50535821 -116114475 + L1MEg LINE L1 1304 1534 -4708 6 970 280 216 66 26 chrX 50535956 50536032 -116114264 - RSINE1 SINE B4 -85 80 2 7 970 915 185 86 15 chrX 50536196 50536394 -116113902 + B3 SINE B2 1 212 -4 7 970 213 246 0 15 chrX 50536676 50536742 -116113554 + A-rich Low_complexity Low_complexity 4 68 0 7 970 225 260 89 47 chrX 50536843 50537033 -116113263 + L1MEg LINE L1 2279 2476 -3690 6 970 24 32 0 0 chrX 50537052 50537083 -116113213 + AT_rich Low_complexity Low_complexity 1 31 0 7 970 439 299 95 50 chrX 50537125 50537637 -116112659 + L1MEg LINE L1 3596 4143 -2003 6 970 248 300 12 0 chrX 50537637 50537717 -116112579 + ID4 SINE ID 3 83 0 7 970 439 306 90 66 chrX 50537717 50537973 -116112323 + L1MEg LINE L1 4144 4390 -1756 6 970 1192 309 83 12 chrX 50538195 50538676 -116111620 + L1MDa LINE L1 19 533 -6100 7 970 241 149 0 21 chrX 50538875 50538923 -116111373 + MTE2a LTR MaLR 3 49 -330 7 970 239 113 148 19 chrX 50538934 50538988 -116111308 + L1MDa LINE L1 1275 1335 -5298 7 970 255 245 2 0 chrX 50539235 50539317 -116110979 + B1F1 SINE Alu 23 105 -15 7 970 200 35 35 0 chrX 50539425 50539454 -116110842 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 7 970 2093 261 99 19 chrX 50539458 50540227 -116110069 + L1MDa LINE L1 1599 2428 -4205 7 970 214 321 25 13 chrX 50540232 50540311 -116109985 + ID2 SINE ID 4 83 0 8 970 207 188 0 0 chrX 50540353 50540401 -116109895 + A-rich Low_complexity Low_complexity 2 49 0 8 970 314 329 35 0 chrX 50540499 50540651 -116109645 + L1MD3 LINE L1 5839 5996 -183 8 970 769 291 29 5 chrX 50540678 50540885 -116109411 + B4A SINE B4 1 212 -80 8 970 291 93 0 0 chrX 50541164 50541207 -116109089 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 8 970 1067 296 116 19 chrX 50541296 50541729 -116108567 + Tigger7 DNA MER2_type 9 483 -2008 8 970 281 248 48 108 chrX 50541865 50542032 -116108264 + L1MEg LINE L1 5315 5471 -2411 6 970 588 275 13 88 chrX 50542167 50542192 -116108104 - B3 SINE B2 -6 210 188 8 970 432 0 0 0 chrX 50542192 50542240 -116108056 + (TC)n Simple_repeat Simple_repeat 2 49 0 8 970 243 0 0 0 chrX 50542240 50542266 -116108030 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 970 678 274 12 17 chrX 50542266 50542466 -116107830 - B3A SINE B2 -29 187 1 8 970 235 214 56 28 chrX 50542536 50542608 -116107688 + Lx4A LINE L1 5695 5768 -1290 8 970 1298 14 0 0 chrX 50542917 50543063 -116107233 - B1_Mm SINE Alu 0 147 2 9 970 243 0 0 0 chrX 50543167 50543194 -116107102 + (CA)n Simple_repeat Simple_repeat 1 27 0 9 970 378 0 0 0 chrX 50543247 50543289 -116107007 + (TC)n Simple_repeat Simple_repeat 1 42 0 9 970 189 139 0 0 chrX 50543552 50543562 -116106734 + (A)n Simple_repeat Simple_repeat 1 10 0 9 970 1145 88 0 7 chrX 50543562 50543710 -116106586 + B1_Mus2 SINE Alu 1 147 0 9 970 189 139 0 0 chrX 50543710 50543735 -116106561 + (A)n Simple_repeat Simple_repeat 1 25 0 9 970 317 239 12 28 chrX 50544693 50544775 -116105521 - PB1D10 SINE Alu 0 120 41 9 970 498 318 23 0 chrX 50545470 50545602 -116104694 + B1F1 SINE Alu 14 148 -1 9 970 437 291 44 15 chrX 50545621 50545757 -116104539 + ID_B1 SINE B4 78 217 -7 9 970 405 0 0 0 chrX 50547144 50547189 -116103107 + (CA)n Simple_repeat Simple_repeat 2 46 0 9 970 697 219 97 36 chrX 50547198 50547445 -116102851 - L1MB3 LINE L1 -145 6038 5777 1 970 1013 236 101 76 chrX 50547445 50547840 -116102456 + MTD LTR MaLR 15 419 0 1 970 213 341 55 0 chrX 50548058 50548107 -116102189 - MIRb SINE MIR -139 129 81 1 970 366 276 115 89 chrX 50548107 50548298 -116101998 + B3A SINE B2 3 198 0 1 970 213 341 55 0 chrX 50548298 50548339 -116101957 - MIRb SINE MIR -188 80 35 1 970 278 293 164 46 chrX 50548443 50548621 -116101675 - Lx9 LINE L1 -27 7617 7299 1 970 189 74 0 0 chrX 50548621 50548648 -116101648 + (CACG)n Simple_repeat Simple_repeat 1 27 0 1 970 278 283 191 40 chrX 50548648 50548751 -116101545 - Lx9 LINE L1 -165 7479 7341 1 970 1130 75 0 45 chrX 50548866 50549020 -116101276 + B1_Mus2 SINE Alu 1 147 0 1 970 207 0 0 0 chrX 50549024 50549047 -116101249 + (A)n Simple_repeat Simple_repeat 1 23 0 1 970 470 259 74 0 chrX 50550430 50550538 -116099758 - ID_B1 SINE B4 -101 123 8 1 970 28 0 0 0 chrX 50550743 50550771 -116099525 + AT_rich Low_complexity Low_complexity 1 28 0 1 970 596 219 39 46 chrX 50550788 50550941 -116099355 - RSINE1 SINE B4 -6 159 8 1 970 231 378 12 0 chrX 50551312 50551394 -116098902 + MER121 Unknown Unknown 304 386 -26 1 970 662 292 43 35 chrX 50551657 50552005 -116098291 + L1M4 LINE L1 4060 4410 -1736 1 970 268 280 13 0 chrX 50552175 50552250 -116098046 + L1M4 LINE L1 4421 4496 -1650 1 970 915 241 16 20 chrX 50552401 50552647 -116097649 - L1MA4 LINE L1 -364 5936 5692 1 970 468 185 43 11 chrX 50552843 50552936 -116097360 + RSINE1 SINE B4 3 98 -67 1 970 482 303 82 31 chrX 50552947 50553141 -116097155 - B4A SINE B4 -72 220 17 1 970 356 221 102 31 chrX 50553178 50553374 -116096922 + Charlie2b DNA MER1_type 2529 2738 -44 1 970 350 248 148 27 chrX 50553393 50553542 -116096754 + L1MC4a LINE L1 7430 7596 -286 1 970 21 0 0 0 chrX 50554011 50554032 -116096264 + AT_rich Low_complexity Low_complexity 1 21 0 1 970 594 0 0 0 chrX 50554197 50554263 -116096033 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 1 970 680 235 0 0 chrX 50554311 50554447 -116095849 + B1_Mur3 SINE Alu 13 148 -1 1 970 283 316 19 13 chrX 50554833 50554930 -116095366 + MIRm SINE MIR 17 117 -91 1 970 245 276 40 0 chrX 50555520 50555596 -116094700 - ID2 SINE ID -3 80 2 1 970 293 308 65 11 chrX 50555607 50555699 -116094597 - PB1D10 SINE Alu -13 104 8 1 970 232 317 0 0 chrX 50555646 50555706 -116094590 - B4A SINE B4 -147 145 86 1 970 234 312 214 7 chrX 50555763 50555908 -116094388 - MIR SINE MIR -56 206 32 1 970 189 258 113 0 chrX 50555947 50556009 -116094287 - MER5A DNA MER1_type -55 134 66 1 970 678 284 6 6 chrX 50556035 50556205 -116094091 - ID_B1 SINE B4 -53 171 2 1 970 292 243 27 13 chrX 50556205 50556278 -116094018 - MER5A DNA MER1_type -112 77 4 1 970 245 167 161 32 chrX 50556358 50556420 -116093876 - L1MA6 LINE L1 -3 6297 6228 1 970 227 242 42 83 chrX 50556421 50556493 -116093803 + ID4_ SINE ID 2 70 -13 1 970 517 157 9 9 chrX 50556506 50556622 -116093674 + (TAGA)n Simple_repeat Simple_repeat 3 118 0 1 970 1027 246 144 29 chrX 50556625 50556973 -116093323 - L1MA6 LINE L1 -90 6210 5823 1 970 198 319 64 48 chrX 50556997 50557122 -116093174 + L2a LINE L2 2826 2952 -467 1 970 199 266 42 14 chrX 50557440 50557512 -116092784 + L2a LINE L2 3305 3393 -33 1 970 234 229 56 14 chrX 50558351 50558422 -116091874 + L1M4 LINE L1 1343 1416 -5592 1 970 393 216 55 16 chrX 50558546 50558673 -116091623 + L1M4 LINE L1 1505 1636 -5268 1 970 425 298 29 0 chrX 50558706 50558810 -116091486 + B1F SINE Alu 37 143 -6 1 970 295 310 14 0 chrX 50558820 50558891 -116091405 + ID4 SINE ID 3 74 -9 1 970 319 323 68 30 chrX 50558953 50559322 -116090974 + L1M4 LINE L1 1721 2123 -5211 1 970 259 276 214 0 chrX 50559335 50559433 -116090863 + ID_B1 SINE B4 79 197 -27 1 970 1104 95 6 6 chrX 50559761 50559920 -116090376 + B2_Mm1t SINE B2 2 160 -33 1 970 186 71 0 0 chrX 50559920 50559948 -116090348 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 1 970 616 278 101 11 chrX 50559948 50559966 -116090330 + B3A SINE B2 176 194 -4 1 970 285 141 0 40 chrX 50559992 50560066 -116090230 + (TA)n Simple_repeat Simple_repeat 1 71 0 1 970 239 211 0 0 chrX 50560066 50560118 -116090178 + L1M4 LINE L1 2371 2422 -4586 1 970 661 216 14 21 chrX 50560157 50560299 -116089997 - ID_B1 SINE B4 0 224 84 1 970 219 312 103 54 chrX 50560923 50561126 -116089170 - MIRb SINE MIR -36 232 20 1 970 191 302 48 0 chrX 50562187 50562250 -116088046 + MIRc SINE MIR 116 181 -87 1 970 526 250 51 28 chrX 50563113 50563290 -116087006 - MamRep434 DNA TcMar -84 342 162 1 970 255 31 0 0 chrX 50563940 50563972 -116086324 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 970 1263 94 0 0 chrX 50564277 50564457 -116085839 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 970 205 191 0 0 chrX 50564804 50564846 -116085450 + T-rich Low_complexity Low_complexity 1 42 0 1 970 468 0 0 0 chrX 50565563 50565615 -116084681 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 970 259 257 39 39 chrX 50566016 50566093 -116084203 - B1_Mur1 SINE Alu -6 143 67 1 970 401 336 23 0 chrX 50566297 50566428 -116083868 - B1F SINE Alu -14 135 2 1 970 621 49 0 0 chrX 50566551 50566632 -116083664 + (CA)n Simple_repeat Simple_repeat 2 82 0 1 970 225 0 0 0 chrX 50566632 50566656 -116083640 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 970 330 284 0 0 chrX 50569932 50570013 -116080283 + ID2 SINE ID 1 81 -2 1 970 643 299 80 48 chrX 50570310 50570724 -116079572 + L1ME3A LINE L1 5574 6000 -173 1 970 444 242 123 16 chrX 50570824 50570946 -116079350 - B1_Mur1 SINE Alu -4 145 11 1 970 315 281 82 45 chrX 50570970 50571104 -116079192 + MLT1D LTR MaLR 99 237 -268 1 970 320 320 83 45 chrX 50571310 50571341 -116078955 - RSINE1 SINE B4 0 165 135 1 970 288 0 0 0 chrX 50571341 50571373 -116078923 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 970 486 0 0 0 chrX 50571373 50571426 -116078870 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 970 320 320 83 45 chrX 50571426 50571550 -116078746 - RSINE1 SINE B4 -31 134 4 1 970 229 109 0 35 chrX 50571555 50571612 -116078684 + (TTTTTG)n Simple_repeat Simple_repeat 5 59 0 1 970 1271 61 0 0 chrX 50571612 50571760 -116078536 - B1_Mus1 SINE Alu 0 148 1 1 970 578 259 43 0 chrX 50571761 50571900 -116078396 - ID_B1 SINE B4 -2 222 78 1 970 321 244 6 0 chrX 50572040 50572121 -116078175 + L1MA4 LINE L1 5822 5938 -362 1 970 324 297 51 0 chrX 50572455 50572573 -116077723 + PB1 SINE Alu 1 124 -3 1 970 256 247 25 49 chrX 50572573 50572654 -116077642 + L1ME3A LINE L1 6093 6171 -2 1 970 831 273 22 53 chrX 50572805 50573033 -116077263 - ID_B1 SINE B4 -3 221 1 1 970 411 122 53 15 chrX 50573061 50573194 -116077102 + (CA)n Simple_repeat Simple_repeat 1 138 0 1 970 645 103 26 46 chrX 50573250 50573560 -116076736 + (CA)n Simple_repeat Simple_repeat 1 303 0 1 970 2429 23 0 0 chrX 50574436 50574700 -116075596 + L1Md_A LINE L1 6317 6580 -2 1 970 222 224 200 50 chrX 50574949 50575029 -116075267 + B4A SINE B4 82 173 -119 1 970 490 221 0 40 chrX 50574964 50575063 -116075233 + PB1D7 SINE Alu 25 119 -1 1 970 312 155 0 0 chrX 50575495 50575566 -116074730 + GA-rich Low_complexity Low_complexity 2 72 0 1 970 458 301 0 0 chrX 50576006 50576099 -116074197 + RSINE1 SINE B4 1 93 -72 1 970 230 81 0 26 chrX 50576120 50576158 -116074138 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 970 483 278 0 0 chrX 50576207 50576304 -116073992 + RSINE1 SINE B4 3 99 -66 1 970 414 0 0 0 chrX 50576333 50576379 -116073917 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 970 678 274 24 24 chrX 50576393 50576561 -116073735 - B3 SINE B2 -47 169 2 1 970 237 33 0 0 chrX 50576580 50576610 -116073686 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 970 960 233 20 5 chrX 50576784 50576987 -116073309 - B3 SINE B2 -10 206 1 1 970 968 139 22 14 chrX 50577013 50577152 -116073144 - B1_Mus1 SINE Alu -7 141 2 1 970 414 274 9 9 chrX 50577155 50577262 -116073034 - PB1D10 SINE Alu 0 117 11 1 970 182 233 63 76 chrX 50577437 50577516 -116072780 + L4 LINE RTE 216 293 -1736 1 970 887 112 7 7 chrX 50579543 50579678 -116070618 + B2_Mm1a SINE B2 1 135 -58 1 970 291 182 0 35 chrX 50579688 50579745 -116070551 + B2_Mm2 SINE B2 47 101 -94 1 970 725 247 22 45 chrX 50580179 50580357 -116069939 + B3 SINE B2 37 210 -6 1 970 238 129 65 0 chrX 50580405 50580467 -116069829 + Lx9 LINE L1 7552 7617 -27 1 970 1134 228 24 0 chrX 50580499 50580710 -116069586 - B3 SINE B2 0 216 1 1 970 419 177 27 165 chrX 50580710 50580855 -116069441 - B3A SINE B2 0 198 80 1 970 201 147 0 0 chrX 50581348 50581382 -116068914 + (T)n Simple_repeat Simple_repeat 1 34 0 1 970 1726 200 84 6 chrX 50581499 50581846 -116068450 - ORR1D1 LTR MaLR 0 374 1 1 970 428 272 69 81 chrX 50581848 50582008 -116068288 - RSINE1 SINE B4 -1 164 7 1 970 277 277 61 116 chrX 50582366 50582513 -116067783 + B1F SINE Alu 1 139 -10 1 970 240 281 18 0 chrX 50582523 50582580 -116067716 + ID4_ SINE ID 2 59 -24 1 970 415 324 35 7 chrX 50583488 50583631 -116066665 - RSINE1 SINE B4 -17 148 2 1 970 473 303 72 6 chrX 50583741 50583907 -116066389 - MER3 DNA MER1_type -32 177 1 1 970 298 298 0 31 chrX 50584348 50584445 -116065851 + Lx8 LINE L1 5649 5742 -1731 1 970 465 180 0 0 chrX 50584454 50584543 -116065753 + (TA)n Simple_repeat Simple_repeat 1 89 0 1 970 396 226 9 70 chrX 50584580 50584694 -116065602 + B3 SINE B2 110 216 0 1 970 213 225 0 0 chrX 50585989 50586029 -116064267 + GA-rich Low_complexity Low_complexity 2 41 0 1 970 255 252 57 90 chrX 50586039 50586161 -116064135 + ID_B1 SINE B4 99 216 -8 1 970 229 254 17 0 chrX 50586310 50586369 -116063927 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 970 394 167 48 0 chrX 50586830 50586956 -116063340 + GA-rich Low_complexity Low_complexity 3 134 0 1 970 306 0 0 0 chrX 50587518 50587552 -116062744 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 970 25 0 0 0 chrX 50587750 50587775 -116062521 + AT_rich Low_complexity Low_complexity 1 25 0 2 970 716 219 58 7 chrX 50588120 50588258 -116062038 + B1_Mur1 SINE Alu 5 149 0 2 970 227 235 39 0 chrX 50588265 50588316 -116061980 + GA-rich Low_complexity Low_complexity 3 55 0 2 970 478 286 0 63 chrX 50589212 50589339 -116060957 + B1F1 SINE Alu 19 137 -12 2 970 246 81 0 0 chrX 50589339 50589376 -116060920 + (TC)n Simple_repeat Simple_repeat 2 38 0 2 970 345 100 0 0 chrX 50589378 50589428 -116060868 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 970 555 287 31 0 chrX 50589509 50589638 -116060658 + ID_B1 SINE B4 82 214 -10 2 970 282 295 0 0 chrX 50589995 50590056 -116060240 + B1F SINE Alu 1 61 -88 2 970 1245 172 51 27 chrX 50590135 50590392 -116059904 - RMER1C Other Other 0 1342 1080 2 970 355 189 84 53 chrX 50590392 50590487 -116059809 + 5S rRNA rRNA 3 100 -21 2 970 305 286 133 0 chrX 50590459 50590557 -116059739 + B1_Mus1 SINE Alu 31 141 -7 2 970 24 0 0 0 chrX 50591043 50591067 -116059229 + AT_rich Low_complexity Low_complexity 1 24 0 2 970 1232 248 53 43 chrX 50591071 50591446 -116058850 - Lx8 LINE L1 -1 7472 7094 2 970 308 281 28 37 chrX 50591538 50591645 -116058651 + PB1D7 SINE Alu 3 108 -12 2 970 772 85 17 0 chrX 50591702 50591820 -116058476 + (GAAA)n Simple_repeat Simple_repeat 3 122 0 2 970 787 258 6 0 chrX 50591879 50592042 -116058254 + RSINE1 SINE B4 2 165 0 2 970 863 208 0 0 chrX 50592201 50592345 -116057951 - B1_Mur3 SINE Alu -5 144 1 2 970 258 308 0 0 chrX 50592393 50592445 -116057851 - PB1D10 SINE Alu -57 60 9 2 970 185 329 29 0 chrX 50593463 50593533 -116056763 - L2a LINE L2 -20 3406 3335 2 971 342 45 0 0 chrX 50594216 50594260 -116056036 + (TTA)n Simple_repeat Simple_repeat 2 45 0 2 971 513 204 16 66 chrX 50594279 50594400 -116055896 + PB1D10 SINE Alu 3 117 0 2 971 412 282 28 7 chrX 50594639 50594782 -116055514 + L1MC4 LINE L1 6455 6600 -1282 2 971 512 219 38 0 chrX 50594800 50594905 -116055391 - PB1D10 SINE Alu 0 117 9 2 971 642 275 76 27 chrX 50594926 50595150 -116055146 + L1MC4 LINE L1 6654 6888 -1154 2 971 558 0 0 0 chrX 50595163 50595225 -116055071 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 971 707 224 6 56 chrX 50595257 50595418 -116054878 + B3A SINE B2 1 153 -45 2 971 644 195 24 0 chrX 50595433 50595597 -116054699 + GA-rich Low_complexity Low_complexity 1 168 0 2 971 499 268 178 5 chrX 50595610 50595824 -116054472 + L1MC4 LINE L1 6936 7186 -856 2 971 488 262 32 123 chrX 50595929 50596181 -116054115 + L1MC4 LINE L1 7809 8037 -5 2 971 409 291 48 96 chrX 50600440 50600774 -116049522 - L2c LINE L2 0 3387 3070 2 971 182 278 148 0 chrX 50600896 50600950 -116049346 + MIR SINE MIR 23 84 -124 2 971 320 290 10 23 chrX 50601133 50601151 -116049145 - ID4_ SINE ID -52 100 1 2 971 297 277 23 35 chrX 50601151 50601237 -116049059 - ID SINE ID -139 85 1 2 971 504 275 10 123 chrX 50602447 50602529 -116047767 + ID SINE ID 6 74 -150 2 971 369 0 0 0 chrX 50602529 50602570 -116047726 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 2 971 504 275 10 123 chrX 50602570 50602682 -116047614 + ID_B1 SINE B4 75 178 -46 2 971 486 121 14 0 chrX 50602683 50602757 -116047539 + B1_Mm SINE Alu 29 108 -12 2 971 458 17 0 17 chrX 50602757 50602817 -116047479 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 2 971 349 244 22 22 chrX 50602817 50602834 -116047462 + PB1D7 SINE Alu 105 120 0 2 971 519 298 25 0 chrX 50602936 50603057 -116047239 + B1F1 SINE Alu 5 128 -21 2 971 505 264 8 30 chrX 50604171 50604304 -116045992 - B4A SINE B4 -98 194 65 2 971 240 233 33 55 chrX 50604314 50604405 -116045891 - B3A SINE B2 -105 93 5 2 971 374 311 40 16 chrX 50604415 50604539 -116045757 - PB1 SINE Alu 0 127 1 2 971 299 297 0 26 chrX 50604943 50605019 -116045277 - ID4 SINE ID -2 81 8 2 971 484 241 82 8 chrX 50605028 50605162 -116045134 - B1F SINE Alu -5 144 1 2 971 23 0 0 0 chrX 50605232 50605255 -116045041 + AT_rich Low_complexity Low_complexity 1 23 0 2 971 434 250 0 0 chrX 50605268 50605348 -116044948 - ID4_ SINE ID -3 80 1 2 971 667 254 22 0 chrX 50606191 50606329 -116043967 + B1F SINE Alu 1 141 -8 2 971 658 308 54 105 chrX 50606439 50606812 -116043484 + ORR1E LTR MaLR 6 359 0 2 971 486 258 32 8 chrX 50608176 50608301 -116041995 + B1F SINE Alu 20 147 -2 2 971 707 250 62 24 chrX 50608805 50609014 -116041282 - Lx8 LINE L1 0 7473 7257 2 971 780 291 19 19 chrX 50609133 50609343 -116040953 - ID_B1 SINE B4 -13 211 2 2 971 440 288 28 41 chrX 50609350 50609495 -116040801 - ID_B1 SINE B4 -5 219 77 2 971 425 238 279 70 chrX 50609646 50609818 -116040478 - B3 SINE B2 -6 210 3 2 971 521 233 65 24 chrX 50609842 50609965 -116040331 - B1F SINE Alu -20 129 2 2 971 856 250 30 45 chrX 50609992 50610193 -116040103 - B3A SINE B2 0 198 1 2 971 598 250 73 68 chrX 50610270 50610301 -116039995 - L1M2 LINE L1 -1096 5047 5022 2 971 1472 92 5 0 chrX 50610301 50610486 -116039810 - B2_Mm1t SINE B2 -6 187 2 2 971 598 250 73 68 chrX 50610486 50610660 -116039636 - L1M2 LINE L1 -1122 5021 4841 2 971 816 218 43 38 chrX 50610660 50610846 -116039450 + B3 SINE B2 2 188 -28 2 971 398 269 73 22 chrX 50611187 50611324 -116038972 + B1F1 SINE Alu 5 148 -1 2 971 334 371 0 19 chrX 50611351 50611505 -116038791 - Kanga2_a DNA Tc2 -569 319 169 2 971 308 235 0 0 chrX 50612624 50612705 -116037591 + L1ME2z LINE L1 6351 6431 -13 2 971 609 270 111 20 chrX 50612744 50612997 -116037299 - B4A SINE B4 -16 276 1 2 971 186 133 0 0 chrX 50613778 50613808 -116036488 + (TAAAAA)n Simple_repeat Simple_repeat 1 30 0 2 971 788 190 211 5 chrX 50614842 50615027 -116035269 - ID_B1 SINE B4 0 224 2 2 971 1197 79 96 0 chrX 50615031 50615059 -116035237 - B2_Mm2 SINE B2 0 195 157 2 971 387 0 0 0 chrX 50615059 50615102 -116035194 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 2 971 1197 79 96 0 chrX 50615102 50615250 -116035046 - B2_Mm2 SINE B2 -39 156 3 2 971 763 208 88 0 chrX 50616509 50616701 -116033595 + B3 SINE B2 2 210 -6 2 971 182 182 0 0 chrX 50617755 50617788 -116032508 + L4 LINE RTE 1346 1378 -651 2 971 260 310 171 7 chrX 50617825 50617971 -116032325 - Tigger15a DNA TcMar -1 714 545 2 971 488 277 79 56 chrX 50617994 50618208 -116032088 + MIRc SINE MIR 45 263 -5 2 971 573 250 129 62 chrX 50618389 50618645 -116031651 - Tigger15a DNA TcMar -428 287 15 2 971 204 40 0 0 chrX 50618836 50618861 -116031435 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 2 971 289 233 0 48 chrX 50620027 50620090 -116030206 - PB1 SINE Alu -4 123 64 2 971 1161 54 0 13 chrX 50620165 50620314 -116029982 + B1_Mus2 SINE Alu 1 147 0 2 971 233 302 28 119 chrX 50620380 50620489 -116029807 - ID_B1 SINE B4 -124 100 2 2 971 296 308 182 22 chrX 50620692 50620857 -116029439 - MIR3 SINE MIR -24 184 3 2 971 209 355 9 9 chrX 50622477 50622585 -116027711 + GA-rich Low_complexity Low_complexity 3 110 0 2 971 711 239 16 37 chrX 50623336 50623523 -116026773 - B3A SINE B2 -15 183 1 2 971 503 283 23 23 chrX 50623820 50623950 -116026346 + B3A SINE B2 2 131 -67 2 971 615 254 8 8 chrX 50623925 50624052 -116026244 + B3A SINE B2 20 146 -52 2 971 315 0 0 0 chrX 50624052 50624087 -116026209 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 971 478 306 32 6 chrX 50624225 50624383 -116025913 - RSINE1 SINE B4 0 165 4 2 971 460 226 8 25 chrX 50624485 50624603 -116025693 - MER57C2 LTR ERV1 -2 432 317 2 971 313 212 32 96 chrX 50624636 50624730 -116025566 + PB1D10 SINE Alu 28 115 -2 2 971 3529 38 135 4 chrX 50624772 50625225 -116025071 + L1Md_F3 LINE L1 6056 6567 -17 2 971 278 26 0 25 chrX 50625232 50625272 -116025024 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 971 281 271 0 0 chrX 50625272 50625342 -116024954 + Lx8 LINE L1 6334 6403 -1070 2 971 243 0 0 0 chrX 50625370 50625397 -116024899 + (CTTA)n Simple_repeat Simple_repeat 1 27 0 2 971 935 158 28 6 chrX 50625397 50625575 -116024721 + ORR1D1-int LTR MaLR 1189 1370 0 2 971 708 249 182 35 chrX 50625575 50625815 -116024481 + ORR1D1 LTR MaLR 97 374 0 2 971 598 237 7 41 chrX 50625823 50625968 -116024328 - ORR1D1 LTR MaLR -227 147 8 2 971 605 289 194 0 chrX 50625984 50626216 -116024080 - Lx8 LINE L1 -866 6607 6331 2 971 279 0 0 0 chrX 50626228 50626259 -116024037 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 971 363 265 48 0 chrX 50626274 50626357 -116023939 - B3A SINE B2 -57 141 55 2 971 3383 267 54 28 chrX 50627026 50628121 -116022175 - Lx8 LINE L1 0 7473 6351 2 971 599 286 30 0 chrX 50628775 50628943 -116021353 + MIR SINE MIR 90 262 0 2 971 236 333 7 57 chrX 50628973 50629113 -116021183 - L3b LINE CR1 -203 279 147 2 971 221 282 70 0 chrX 50629149 50629220 -116021076 + MIRc SINE MIR 176 251 -17 2 971 230 339 62 0 chrX 50629330 50629395 -116020901 + ID4 SINE ID 4 72 -11 2 971 385 258 125 0 chrX 50629439 50629559 -116020737 + B1F SINE Alu 5 139 -10 2 971 1030 76 0 0 chrX 50629605 50629736 -116020560 + B1_Mus1 SINE Alu 2 132 -16 2 971 1496 198 37 53 chrX 50631661 50632040 -116018256 - ORR1D1 LTR MaLR 0 374 2 2 971 636 275 5 87 chrX 50632062 50632281 -116018015 + B4A SINE B4 1 201 -91 2 971 904 101 53 0 chrX 50632463 50632632 -116017664 + GA-rich Low_complexity Low_complexity 3 180 0 2 971 426 178 0 0 chrX 50632638 50632711 -116017585 - B4A SINE B4 -38 254 182 2 971 258 308 0 13 chrX 50632802 50632881 -116017415 - ID4 SINE ID -3 80 3 3 971 377 250 0 0 chrX 50633337 50633409 -116016887 + PB1D7 SINE Alu 1 72 -48 3 971 306 307 69 0 chrX 50633458 50633559 -116016737 - PB1D10 SINE Alu -9 108 1 3 971 258 297 14 0 chrX 50633613 50633687 -116016609 + ID4 SINE ID 3 77 -6 3 971 257 226 177 0 chrX 50633768 50633830 -116016466 + ID4_ SINE ID 2 74 -9 3 971 342 250 29 0 chrX 50633893 50633997 -116016299 - L1MA5 LINE L1 -20 6280 6174 3 971 271 310 75 12 chrX 50634039 50634199 -116016097 - L1MA4 LINE L1 -52 6248 6079 3 971 353 244 23 0 chrX 50634199 50634285 -116016011 + Charlie18a DNA MER1_type 245 332 -10 3 971 216 401 109 13 chrX 50634288 50634601 -116015695 - L2 LINE L2 -497 2922 2580 3 971 212 77 0 25 chrX 50634608 50634648 -116015648 + (TTTTTG)n Simple_repeat Simple_repeat 5 43 0 3 971 565 282 7 34 chrX 50634648 50634795 -116015501 - ID_B1 SINE B4 0 224 82 3 971 343 282 73 93 chrX 50634932 50635192 -116015104 - MER102a DNA MER1_type -28 302 43 3 971 387 0 0 0 chrX 50635323 50635366 -116014930 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 971 447 68 0 0 chrX 50635489 50635548 -116014748 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 971 270 252 139 70 chrX 50635829 50635944 -116014352 - MER5A DNA MER1_type 0 189 67 3 971 338 215 229 18 chrX 50636478 50636644 -116013652 - L1M4 LINE L1 -2143 4003 3803 3 971 390 307 11 49 chrX 50636751 50637014 -116013282 + C-rich Low_complexity Low_complexity 1 253 0 3 971 260 358 0 47 chrX 50637074 50637159 -116013137 + RSINE1 SINE B4 85 165 0 3 971 397 206 47 0 chrX 50637188 50637295 -116013001 + Lx9 LINE L1 7532 7643 -1 3 971 243 250 11 97 chrX 50637447 50637540 -116012756 + MT2B2 LTR ERVL 155 239 -345 3 971 469 282 73 0 chrX 50637464 50637588 -116012708 + B1F SINE Alu 6 138 -11 3 971 396 0 0 0 chrX 50637588 50637632 -116012664 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 971 1185 55 0 20 chrX 50637746 50637759 -116012537 - B1_Mm SINE Alu 0 147 136 3 971 243 0 0 0 chrX 50637759 50637786 -116012510 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3 971 1185 55 0 20 chrX 50637786 50637921 -116012375 - B1_Mm SINE Alu -12 135 2 3 971 631 221 14 14 chrX 50637987 50638125 -116012171 + B1_Mur4 SINE Alu 5 142 -8 3 971 228 67 0 0 chrX 50638126 50638156 -116012140 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 3 971 233 238 406 0 chrX 50638165 50638266 -116012030 + B3A SINE B2 1 142 -56 3 971 459 0 0 0 chrX 50638289 50638340 -116011956 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 971 850 285 10 20 chrX 50638371 50638568 -116011728 + ID_B1 SINE B4 26 220 -4 3 971 402 138 15 0 chrX 50638710 50638775 -116011521 + B3A SINE B2 1 66 -132 3 971 899 159 14 0 chrX 50638876 50639021 -116011275 + B1_Mur4 SINE Alu 3 149 -1 3 971 359 323 99 0 chrX 50639063 50639224 -116011072 + MIR SINE MIR 78 254 -8 3 971 288 0 0 0 chrX 50639227 50639259 -116011037 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 971 1205 260 14 17 chrX 50639289 50639579 -116010717 - B4A SINE B4 -3 289 1 3 971 430 276 9 19 chrX 50639979 50640086 -116010210 - MLT1L LTR MaLR -89 521 416 3 971 226 274 0 0 chrX 50640552 50640603 -116009693 + T-rich Low_complexity Low_complexity 1 51 0 3 971 260 253 188 12 chrX 50641084 50641164 -116009132 - B1F1 SINE Alu -55 94 1 3 971 241 306 147 9 chrX 50641164 50641193 -116009103 - ID_B1 SINE B4 -52 172 49 3 971 305 254 0 27 chrX 50641449 50641522 -116008774 - ID4_ SINE ID -11 72 2 3 971 906 36 0 0 chrX 50641777 50641887 -116008409 + (TTCC)n Simple_repeat Simple_repeat 3 112 0 3 971 1098 51 65 0 chrX 50641891 50642029 -116008267 - B1_Mm SINE Alu 0 147 1 3 971 25 0 0 0 chrX 50642271 50642296 -116008000 + AT_rich Low_complexity Low_complexity 1 25 0 3 971 668 246 22 0 chrX 50642485 50642623 -116007673 + B1_Mur1 SINE Alu 1 141 -8 3 971 492 182 0 0 chrX 50642625 50642757 -116007539 + CT-rich Low_complexity Low_complexity 1 132 0 3 971 806 265 47 52 chrX 50643316 50643507 -116006789 - B3A SINE B2 -17 199 10 3 971 212 314 128 0 chrX 50643609 50643695 -116006601 - PB1D10 SINE Alu -16 101 5 3 971 852 172 15 0 chrX 50643970 50644104 -116006192 - B1_Mur3 SINE Alu -11 138 3 3 971 393 339 73 6 chrX 50644763 50644941 -116005355 + B3A SINE B2 3 192 -6 3 971 279 296 43 36 chrX 50644980 50645139 -116005157 + L2a LINE L2 3206 3417 -9 3 971 237 186 57 0 chrX 50645164 50645234 -116005062 + (TA)n Simple_repeat Simple_repeat 2 75 0 3 971 308 301 0 12 chrX 50645248 50645332 -116004964 + ID4 SINE ID 1 83 0 3 971 342 250 269 0 chrX 50645856 50645960 -116004336 + ID_B1 SINE B4 86 217 -7 3 971 279 0 0 0 chrX 50646036 50646067 -116004229 + (TC)n Simple_repeat Simple_repeat 2 32 0 3 971 375 23 0 0 chrX 50646067 50646110 -116004186 + (TA)n Simple_repeat Simple_repeat 1 44 0 3 971 750 144 11 175 chrX 50646175 50646352 -116003944 - B1_Mus1 SINE Alu 0 148 1 3 971 1028 116 0 7 chrX 50646450 50646597 -116003699 - B1_Mm SINE Alu -1 146 1 3 971 630 118 0 0 chrX 50646789 50646891 -116003405 + (TG)n Simple_repeat Simple_repeat 1 102 0 3 971 503 285 21 42 chrX 50646891 50647034 -116003262 - RSINE1 SINE B4 -24 141 2 3 971 459 0 0 0 chrX 50647042 50647093 -116003203 + (TTA)n Simple_repeat Simple_repeat 3 53 0 3 971 339 239 15 0 chrX 50647209 50647276 -116003020 + ID_B1 SINE B4 137 204 -20 3 971 271 338 25 0 chrX 50647315 50647395 -116002901 - ID4_ SINE ID 0 83 2 3 971 282 307 27 74 chrX 50647395 50647539 -116002757 - Charlie7 DNA MER1_type -8 2604 2468 3 971 446 292 33 8 chrX 50647540 50647661 -116002635 + ID_B1 SINE B4 91 214 -10 3 971 21 36 0 0 chrX 50647718 50647746 -116002550 + AT_rich Low_complexity Low_complexity 1 28 0 3 971 360 267 9 38 chrX 50647867 50647972 -116002324 - PB1 SINE Alu -3 124 23 3 971 255 309 0 0 chrX 50647970 50648025 -116002271 - ID4_ SINE ID -28 55 1 3 971 924 222 70 27 chrX 50648025 50648326 -116001970 - L1MB4 LINE L1 -40 6140 5827 3 971 329 269 51 13 chrX 50648328 50648407 -116001889 - ID4_ SINE ID 0 83 2 3 971 358 238 365 12 chrX 50648411 50648668 -116001628 - L1MB4 LINE L1 -347 5827 5481 3 971 24 32 0 0 chrX 50648737 50648768 -116001528 + AT_rich Low_complexity Low_complexity 1 31 0 3 971 607 241 98 0 chrX 50648789 50648922 -116001374 - RSINE1 SINE B4 -19 146 1 3 971 306 309 53 35 chrX 50649637 50649751 -116000545 + B3 SINE B2 69 184 -32 3 971 232 197 21 28 chrX 50649985 50650126 -116000170 + GA-rich Low_complexity Low_complexity 1 140 0 3 971 491 213 64 0 chrX 50650267 50650361 -115999935 + ID_B1 SINE B4 112 211 -13 3 971 182 37 37 0 chrX 50651047 50651074 -115999222 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 3 971 307 246 76 46 chrX 50651941 50652050 -115998246 + PB1D7 SINE Alu 21 127 0 3 971 4836 114 11 15 chrX 50652207 50652962 -115997334 + RMER6A LTR ERVK 1 752 -4 3 971 369 195 85 0 chrX 50653194 50653276 -115997020 - PB1D7 SINE Alu 0 120 32 3 971 243 304 50 59 chrX 50653291 50653327 -115996969 - BC1_Mm scRNA scRNA -32 120 85 3 971 681 47 0 0 chrX 50653327 50653412 -115996884 + (TCCC)n Simple_repeat Simple_repeat 4 88 0 3 971 247 295 4 90 chrX 50653412 50653494 -115996802 - ID4 SINE ID -68 84 3 3 971 409 286 70 16 chrX 50653510 50653638 -115996658 - B1F SINE Alu -8 141 7 3 971 850 265 24 5 chrX 50654018 50654230 -115996066 - ID_B1 SINE B4 -8 216 1 3 971 320 262 12 36 chrX 50654273 50654356 -115995940 + ID SINE ID 4 84 -140 3 971 616 225 53 9 chrX 50654668 50654815 -115995481 - B1_Mur1 SINE Alu 0 149 1 3 971 29 0 0 0 chrX 50654825 50654854 -115995442 + AT_rich Low_complexity Low_complexity 1 29 0 3 971 518 220 34 84 chrX 50654920 50655039 -115995257 - B3A SINE B2 -34 182 70 3 971 904 276 10 10 chrX 50655084 50655282 -115995014 + ID_B1 SINE B4 1 198 -26 3 971 186 118 0 0 chrX 50655287 50655321 -115994975 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 3 971 363 263 0 0 chrX 50655509 50655585 -115994711 + ID4_ SINE ID 1 76 -7 3 971 681 276 72 38 chrX 50655627 50655654 -115994642 - Helitron3Na_Mam RC Helitron -235 251 221 3 971 423 0 0 0 chrX 50655654 50655701 -115994595 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 971 681 276 72 38 chrX 50655701 50655910 -115994386 - Helitron3Na_Mam RC Helitron -266 220 7 3 971 386 288 0 0 chrX 50656418 50656498 -115993798 - ID4_ SINE ID -2 81 2 3 971 246 210 46 46 chrX 50656670 50656735 -115993561 - ID2 SINE ID -16 67 3 3 971 427 215 164 8 chrX 50656887 50657009 -115993287 + B1F SINE Alu 1 141 -8 3 971 234 0 0 0 chrX 50657227 50657253 -115993043 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 971 440 189 73 36 chrX 50657433 50657543 -115992753 - PB1D10 SINE Alu 0 117 4 3 971 419 205 13 0 chrX 50657796 50657874 -115992422 + ID4 SINE ID 5 83 0 3 971 412 233 39 0 chrX 50658643 50658746 -115991550 - PB1D7 SINE Alu -9 111 5 3 971 340 242 0 0 chrX 50658816 50658878 -115991418 - ID4_ SINE ID -20 63 2 3 971 510 326 15 8 chrX 50659208 50659338 -115990958 + ID_B1 SINE B4 81 211 -13 3 971 821 290 19 14 chrX 50659353 50659563 -115990733 + 7SK RNA RNA 1 211 -120 3 971 230 285 135 75 chrX 50659742 50659766 -115990530 - ID_B1 SINE B4 -5 219 142 4 971 288 261 152 0 chrX 50659766 50659858 -115990438 - PB1D10 SINE Alu 0 117 12 4 971 230 285 135 75 chrX 50659858 50659875 -115990421 - ID_B1 SINE B4 -5 141 79 4 971 21 0 0 0 chrX 50659999 50660020 -115990276 + AT_rich Low_complexity Low_complexity 1 21 0 4 971 480 254 0 34 chrX 50660022 50660140 -115990156 - ID_B1 SINE B4 -5 219 106 4 971 543 307 7 0 chrX 50660728 50660868 -115989428 + ID_B1 SINE B4 82 222 -2 4 971 468 243 58 0 chrX 50661100 50661203 -115989093 + PB1D7 SINE Alu 5 113 -7 4 971 198 0 0 0 chrX 50661570 50661592 -115988704 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 971 227 222 181 0 chrX 50661601 50661673 -115988623 + ID_B1 SINE B4 93 177 -47 4 971 225 157 19 19 chrX 50661683 50661735 -115988561 + A-rich Low_complexity Low_complexity 3 54 0 4 971 304 262 104 37 chrX 50662319 50662454 -115987842 + B1F1 SINE Alu 1 144 -5 4 971 458 300 7 28 chrX 50662714 50662858 -115987438 - B1_Mur1 SINE Alu -7 142 2 4 971 1038 183 54 15 chrX 50662862 50663067 -115987229 - B3 SINE B2 -3 213 1 4 971 398 267 34 17 chrX 50663131 50663249 -115987047 + MIR3 SINE MIR 86 205 -3 4 971 212 0 36 0 chrX 50664129 50664157 -115986139 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 971 203 289 26 0 chrX 50664294 50664370 -115985926 + CT-rich Low_complexity Low_complexity 1 78 0 4 971 906 276 14 0 chrX 50664515 50664736 -115985560 + ID_B1 SINE B4 1 224 0 4 971 276 200 0 0 chrX 50664820 50664870 -115985426 + tRNA-Asn-AAC tRNA tRNA 28 77 0 4 971 261 286 128 23 chrX 50664934 50665020 -115985276 + PB1D10 SINE Alu 1 95 -22 4 971 398 233 66 28 chrX 50664956 50665062 -115985234 + ID_B1 SINE B4 114 223 -1 4 971 629 286 44 22 chrX 50665164 50665474 -115984822 + L1MB4 LINE L1 5821 6146 -28 4 971 611 238 7 44 chrX 50666166 50666302 -115983994 - B3A SINE B2 -20 178 48 4 971 783 92 31 0 chrX 50666426 50666556 -115983740 + (TTTC)n Simple_repeat Simple_repeat 2 135 0 4 971 969 120 0 7 chrX 50666558 50666701 -115983595 - B1_Mus2 SINE Alu 0 147 6 4 971 505 274 0 0 chrX 50666801 50666918 -115983378 - PB1D9 SINE Alu -2 118 2 4 971 3639 76 0 0 chrX 50666992 50667451 -115982845 - L1_Mm LINE L1 -52 5831 5373 4 971 594 263 41 9 chrX 50668426 50668572 -115981724 + ID_B1 SINE B4 88 239 -53 4 971 355 325 130 13 chrX 50668595 50668826 -115981470 - L1ME1 LINE L1 -118 6061 5804 4 971 242 175 0 0 chrX 50668862 50668902 -115981394 - L1ME1 LINE L1 -733 5711 5672 4 971 734 230 7 7 chrX 50668971 50669111 -115981185 - RSINE1 SINE B4 -23 142 3 4 971 351 252 86 36 chrX 50669112 50669252 -115981044 - L1ME1 LINE L1 -504 5675 5529 4 971 357 264 148 7 chrX 50669322 50669471 -115980825 + MurSatRep1 Unknown Unknown 100 269 -1868 4 971 1224 75 0 0 chrX 50669555 50669701 -115980595 + B1_Mus2 SINE Alu 2 147 0 4 971 242 295 111 28 chrX 50669900 50670008 -115980288 - PB1D10 SINE Alu 0 117 1 4 971 217 311 0 0 chrX 50670081 50670126 -115980170 - B1F2 SINE Alu -102 47 3 4 971 487 261 54 9 chrX 50670155 50670267 -115980029 + PB1D10 SINE Alu 1 117 0 4 971 420 20 0 0 chrX 50670899 50670948 -115979348 + (TTA)n Simple_repeat Simple_repeat 3 51 0 4 971 465 287 19 11 chrX 50671252 50671388 -115978908 + ID_B1 SINE B4 90 223 -1 4 971 374 318 0 18 chrX 50671411 50671523 -115978773 + PB1D9 SINE Alu 10 119 -1 4 971 396 291 39 0 chrX 50671539 50671642 -115978654 + ID_B1 SINE B4 116 222 -2 4 971 188 273 0 113 chrX 50672153 50672215 -115978081 + L2 LINE L2 544 598 -2821 4 971 216 328 39 62 chrX 50672254 50672384 -115977912 + MIRb SINE MIR 123 249 -19 4 971 234 0 0 0 chrX 50672712 50672738 -115977558 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 971 414 0 0 0 chrX 50672738 50672783 -115977513 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 971 786 296 0 39 chrX 50672984 50673188 -115977108 - B4A SINE B4 -12 280 85 4 971 280 217 17 0 chrX 50673187 50673247 -115977049 + B1F SINE Alu 66 126 -23 4 971 257 335 92 40 chrX 50673444 50673618 -115976678 - MIRb SINE MIR -4 264 82 4 971 388 287 9 9 chrX 50673798 50673907 -115976389 - PB1D10 SINE Alu -6 111 3 4 971 562 252 106 0 chrX 50675317 50675440 -115974856 - B1_Mur1 SINE Alu -13 136 1 4 971 216 0 0 0 chrX 50675464 50675488 -115974808 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 971 536 356 14 14 chrX 50675503 50675651 -115974645 - RSINE1 SINE B4 -14 151 4 4 971 287 255 116 89 chrX 50675964 50676076 -115974220 - PB1D7 SINE Alu -5 115 1 4 971 447 191 23 45 chrX 50676086 50676174 -115974122 - PB1D9 SINE Alu -6 114 29 4 971 1235 63 0 0 chrX 50676224 50676366 -115973930 + B1_Mus1 SINE Alu 1 142 -6 4 971 260 27 27 0 chrX 50676375 50676412 -115973884 + (CAA)n Simple_repeat Simple_repeat 2 39 0 4 971 559 202 0 0 chrX 50676413 50676512 -115973784 + RSINE1 SINE B4 28 126 -39 4 971 432 0 0 0 chrX 50676523 50676571 -115973725 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 971 564 261 35 71 chrX 50677272 50677441 -115972855 + ORR1E LTR MaLR 3 165 -194 4 971 393 258 8 32 chrX 50677634 50677746 -115972550 - B1F1 SINE Alu -55 94 2 4 971 324 219 0 12 chrX 50678105 50678188 -115972108 - L1MC4 LINE L1 -501 7541 7460 4 971 561 343 14 23 chrX 50678254 50678469 -115971827 - B4A SINE B4 -77 215 3 4 971 391 269 81 27 chrX 50678581 50678692 -115971604 + PB1D10 SINE Alu 1 117 0 4 971 218 56 28 0 chrX 50678749 50678785 -115971511 + (TTTTG)n Simple_repeat Simple_repeat 5 41 0 4 971 359 311 135 8 chrX 50678957 50679090 -115971206 - MLT1C LTR MaLR -8 459 310 4 971 286 178 0 0 chrX 50679335 50679380 -115970916 - ID4 SINE ID -38 45 1 4 971 413 293 0 134 chrX 50679385 50679527 -115970769 - PB1 SINE Alu -2 125 3 4 971 948 57 0 0 chrX 50679712 50679834 -115970462 - B2_Mm2 SINE B2 -72 123 2 4 971 315 250 97 0 chrX 50680639 50680711 -115969585 + ID4_ SINE ID 3 81 -2 4 971 1920 207 36 16 chrX 50680780 50681143 -115969153 - ORR1D2 LTR MaLR 0 370 1 4 971 21 0 0 0 chrX 50681313 50681334 -115968962 + AT_rich Low_complexity Low_complexity 1 21 0 4 971 183 222 56 0 chrX 50681402 50681456 -115968840 - MIR SINE MIR -102 166 106 4 971 1755 205 59 5 chrX 50681462 50681861 -115968435 - RCHARR1 DNA MER1_type -1 973 553 4 971 233 359 0 25 chrX 50681861 50681941 -115968355 + B4A SINE B4 2 79 -213 4 971 755 159 35 130 chrX 50682035 50682133 -115968163 - RCHARR1 DNA MER1_type -405 569 482 4 971 676 244 90 48 chrX 50682133 50682322 -115967974 - B3A SINE B2 0 198 2 4 971 755 159 35 130 chrX 50682322 50682454 -115967842 - RCHARR1 DNA MER1_type -493 481 361 4 971 594 178 84 0 chrX 50682468 50682575 -115967721 + B1_Mur2 SINE Alu 34 149 0 4 971 424 111 0 0 chrX 50682582 50682645 -115967651 + B1_Mm SINE Alu 84 146 -1 4 971 206 109 0 42 chrX 50682661 50682709 -115967587 + (CAAA)n Simple_repeat Simple_repeat 1 46 0 4 971 669 319 41 32 chrX 50682712 50682958 -115967338 - RCHARR1 DNA MER1_type -618 356 109 4 971 625 252 29 0 chrX 50682953 50683092 -115967204 - ID_B1 SINE B4 -2 222 80 4 971 1347 257 88 6 chrX 50683101 50683430 -115966866 - Lx5 LINE L1 0 7050 6695 4 971 459 223 11 0 chrX 50683430 50683524 -115966772 - ID_B1 SINE B4 -129 95 1 4 971 181 309 0 0 chrX 50683602 50683644 -115966652 - MIR SINE MIR -155 107 66 4 971 369 0 0 0 chrX 50684399 50684440 -115965856 + (TTTTG)n Simple_repeat Simple_repeat 5 45 0 4 971 942 274 37 117 chrX 50684487 50684530 -115965766 - MTE2a LTR MaLR 0 379 335 4 971 920 222 93 0 chrX 50684530 50684724 -115965572 + B3 SINE B2 1 212 -4 4 971 942 274 37 117 chrX 50684724 50684735 -115965561 - MTE2a LTR MaLR -45 334 334 4 971 2932 88 25 20 chrX 50684735 50685141 -115965155 - Lx LINE L1 -7 6647 6240 4 971 942 278 39 115 chrX 50685141 50685470 -115964826 - MTE2a LTR MaLR -45 355 45 4 971 352 221 266 70 chrX 50685470 50685684 -115964612 - ORR1A4-int LTR MaLR 0 1580 1325 4 971 483 235 112 9 chrX 50685678 50685794 -115964502 - B1_Mus2 SINE Alu -16 133 6 4 971 471 172 109 11 chrX 50685724 50685896 -115964400 - MT2B LTR ERVL -277 198 1 4 971 653 154 8 31 chrX 50685939 50686066 -115964230 - ORR1A4-int LTR MaLR -1324 639 516 4 971 1963 266 48 75 chrX 50686099 50686871 -115963425 - ORR1A4-int LTR MaLR -187 1393 343 4 971 662 158 1 5 chrX 50686931 50687046 -115963250 + B1_Mm SINE Alu 3 116 -32 4 971 488 16 0 16 chrX 50687046 50687108 -115963188 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 971 340 203 0 28 chrX 50687170 50687241 -115963055 - B4A SINE B4 -8 284 216 4 971 517 317 62 52 chrX 50687231 50687408 -115962888 - B3A SINE B2 0 216 40 4 971 377 277 0 34 chrX 50687418 50687538 -115962758 - B4A SINE B4 -59 233 124 4 971 479 261 132 12 chrX 50687691 50687858 -115962438 - L1MD2 LINE L1 -239 6120 5934 4 971 250 330 31 21 chrX 50687860 50687956 -115962340 + ID_B1 SINE B4 79 175 -49 4 971 331 320 30 0 chrX 50687871 50687971 -115962325 + PB1D10 SINE Alu 7 109 -8 4 971 186 118 0 0 chrX 50688206 50688240 -115962056 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 971 264 77 0 0 chrX 50688242 50688281 -115962015 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 4 971 467 246 9 0 chrX 50689488 50689598 -115960698 - ID_B1 SINE B4 -2 222 112 4 971 363 260 52 59 chrX 50689598 50689623 -115960673 - B1F1 SINE Alu -2 147 14 4 971 387 0 0 0 chrX 50689992 50690035 -115960261 + (TC)n Simple_repeat Simple_repeat 1 43 0 4 971 848 239 14 54 chrX 50690201 50690422 -115959874 + B3 SINE B2 2 213 -3 4 971 193 337 0 104 chrX 50690705 50690811 -115959485 + MIRc SINE MIR 62 156 -112 4 971 527 294 18 35 chrX 50690948 50690969 -115959327 - B3A SINE B2 -6 192 173 4 971 474 18 0 0 chrX 50690969 50691024 -115959272 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 971 527 294 18 35 chrX 50691024 50691171 -115959125 - B3A SINE B2 -26 172 27 4 971 1329 118 0 21 chrX 50691198 50691388 -115958908 - B2_Mm2 SINE B2 -8 187 2 5 971 654 241 0 1 chrX 50691416 50691557 -115958739 - B1_Mur1 SINE Alu -8 141 2 5 971 1283 54 0 0 chrX 50691589 50691737 -115958559 + B1_Mus1 SINE Alu 1 148 0 5 971 801 228 105 11 chrX 50691754 50691945 -115958351 - B3 SINE B2 -3 213 5 5 971 341 250 14 0 chrX 50691975 50692047 -115958249 + Charlie12 DNA MER1_type 1 73 -2800 5 971 476 283 21 35 chrX 50692092 50692235 -115958061 - B1F1 SINE Alu 0 149 9 5 971 441 276 142 0 chrX 50692466 50692593 -115957703 + RSINE1 SINE B4 3 147 -18 5 971 617 310 36 40 chrX 50692680 50692902 -115957394 + ID_B1 SINE B4 4 224 0 5 971 240 35 0 0 chrX 50693127 50693156 -115957140 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 971 554 0 0 15 chrX 50693453 50693520 -115956776 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 5 971 221 231 0 188 chrX 50694139 50694155 -115956141 - PB1D10 SINE Alu -7 110 33 5 971 293 236 0 100 chrX 50694155 50694235 -115956061 - ID_B1 SINE B4 -39 185 114 5 971 376 234 150 41 chrX 50694323 50694470 -115955826 - MER5A1 DNA MER1_type -2 164 2 5 971 225 65 0 0 chrX 50694476 50694507 -115955789 + (CTTG)n Simple_repeat Simple_repeat 2 32 0 5 971 539 259 66 15 chrX 50694507 50694644 -115955652 - ID_B1 SINE B4 -11 213 70 5 971 297 323 31 0 chrX 50694712 50694808 -115955488 - B1F1 SINE Alu -2 147 49 5 971 839 237 82 21 chrX 50694831 50695025 -115955271 - B3 SINE B2 -10 206 1 5 971 242 258 18 142 chrX 50695184 50695297 -115954999 - ID_B1 SINE B4 -5 219 121 5 971 243 164 0 0 chrX 50695461 50695522 -115954774 + (TCTG)n Simple_repeat Simple_repeat 2 62 0 5 971 606 208 88 0 chrX 50697223 50697348 -115952948 + B3 SINE B2 35 170 -46 5 971 211 297 234 0 chrX 50697454 50697518 -115952778 - ID4_ SINE ID 0 83 5 5 971 794 162 35 42 chrX 50699644 50699786 -115950510 - B1_Mur3 SINE Alu -2 147 7 5 971 384 271 47 54 chrX 50699689 50699818 -115950478 - B4A SINE B4 -99 193 66 5 971 624 233 13 20 chrX 50700275 50700424 -115949872 + B1F SINE Alu 1 148 -1 5 971 236 53 26 0 chrX 50700429 50700467 -115949829 + (CATA)n Simple_repeat Simple_repeat 4 42 0 5 971 631 235 21 0 chrX 50700472 50700613 -115949683 + ID_B1 SINE B4 85 224 0 5 971 180 0 0 0 chrX 50700629 50700649 -115949647 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 971 186 103 0 0 chrX 50701051 50701080 -115949216 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 5 971 873 151 57 7 chrX 50701374 50701514 -115948782 - B1_Mur2 SINE Alu -1 148 2 5 971 236 331 90 0 chrX 50701525 50701658 -115948638 - Charlie7a DNA MER1_type -93 179 35 5 971 331 359 54 41 chrX 50701668 50701889 -115948407 + Tigger5 DNA MER2_type 28 251 -2155 5 971 256 235 110 12 chrX 50701936 50702018 -115948278 + L1MB1 LINE L1 5929 6018 -150 5 971 730 216 14 14 chrX 50702102 50702243 -115948053 + B1_Mur2 SINE Alu 8 148 -1 5 971 431 245 82 0 chrX 50702261 50702359 -115947937 + PB1D10 SINE Alu 1 106 -11 5 971 303 289 62 69 chrX 50702388 50702436 -115947860 + ID_B1 SINE B4 78 217 -3 5 971 309 253 161 21 chrX 50702436 50702529 -115947767 + PB1D10 SINE Alu 5 110 -7 5 971 242 278 27 27 chrX 50702542 50702616 -115947680 + B4A SINE B4 11 84 -208 5 971 1561 163 169 108 chrX 50702708 50703134 -115947162 + MT2A LTR ERVL 1 452 -81 5 971 285 75 0 0 chrX 50703176 50703216 -115947080 + (TC)n Simple_repeat Simple_repeat 1 40 0 5 971 652 211 8 15 chrX 50703586 50703716 -115946580 + B1F1 SINE Alu 3 131 -18 5 971 211 333 111 28 chrX 50703748 50703856 -115946440 + PB1D7 SINE Alu 1 117 -3 5 971 330 283 155 26 chrX 50703963 50704079 -115946217 + B4A SINE B4 1 131 -161 5 971 1164 204 0 10 chrX 50704303 50704511 -115945785 - B3 SINE B2 -1 215 10 5 971 239 275 58 0 chrX 50704519 50704588 -115945708 - L1MC LINE L1 -2103 5779 5707 5 971 632 265 8 0 chrX 50704988 50705120 -115945176 + RSINE1 SINE B4 5 137 -28 5 971 315 359 30 22 chrX 50705169 50705303 -115944993 - B1F SINE Alu -13 136 2 5 971 268 355 0 41 chrX 50705217 50705314 -115944982 - B4 SINE B4 -123 169 77 5 971 522 261 65 7 chrX 50705919 50706058 -115944238 + B1F2 SINE Alu 2 148 -1 5 971 218 351 0 0 chrX 50706110 50706167 -115944129 + B4A SINE B4 85 141 -151 5 971 445 250 32 79 chrX 50706122 50706248 -115944048 + PB1D7 SINE Alu 12 132 -18 5 971 602 322 67 60 chrX 50706346 50706630 -115943666 - B4 SINE B4 -4 288 3 5 971 758 241 129 16 chrX 50706739 50706925 -115943371 + B3 SINE B2 3 209 -7 5 971 1468 77 22 0 chrX 50706959 50707142 -115943154 + B2_Mm2 SINE B2 1 187 -8 5 971 1404 106 11 5 chrX 50707234 50707423 -115942873 + B2_Mm1t SINE B2 2 191 -2 5 971 357 241 25 0 chrX 50707572 50707651 -115942645 - ID_B1 SINE B4 -8 216 136 5 971 315 301 0 0 chrX 50707958 50708031 -115942265 - ID4_ SINE ID -10 73 1 5 971 351 224 0 0 chrX 50708052 50708119 -115942177 - B1F1 SINE Alu -82 67 1 5 971 279 281 7 31 chrX 50708119 50708155 -115942141 - B4A SINE B4 -133 139 48 5 971 316 169 14 71 chrX 50709312 50709382 -115940914 - tRNA-Ala-GCY_ tRNA tRNA -2 73 8 5 971 306 212 14 83 chrX 50709321 50709393 -115940903 - ID4 SINE ID -12 71 5 5 971 806 167 202 36 chrX 50709730 50709923 -115940373 - URR1B DNA MER1_type 0 225 1 5 971 419 297 18 49 chrX 50711086 50711249 -115939047 + RSINE1 SINE B4 2 159 -6 5 971 218 57 57 0 chrX 50711274 50711309 -115938987 + (CAGAGA)n Simple_repeat Simple_repeat 6 42 0 5 971 240 264 40 90 chrX 50711351 50711362 -115938934 + ID SINE ID 78 83 -141 5 971 448 191 44 11 chrX 50711362 50711452 -115938844 + PB1D9 SINE Alu 3 95 -25 5 971 330 180 165 22 chrX 50711449 50711540 -115938756 - B3 SINE B2 -112 104 1 5 971 384 88 0 0 chrX 50711551 50711608 -115938688 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 971 874 201 52 52 chrX 50711700 50711894 -115938402 + B3A SINE B2 1 194 -4 5 971 929 246 51 19 chrX 50712355 50712570 -115937726 + ID_B1 SINE B4 2 223 -1 5 971 1124 83 7 14 chrX 50712820 50712967 -115937329 - B1_Mus1 SINE Alu -1 147 2 5 971 724 180 30 30 chrX 50713177 50713309 -115936987 + B1_Mur1 SINE Alu 5 136 -13 5 971 843 109 0 0 chrX 50713313 50713469 -115936827 + (GAA)n Simple_repeat Simple_repeat 2 157 0 5 971 315 0 0 0 chrX 50713469 50713504 -115936792 + (TAG)n Simple_repeat Simple_repeat 1 35 0 5 971 308 257 41 74 chrX 50713536 50713658 -115936638 + PB1D7 SINE Alu 3 120 0 5 971 300 219 47 0 chrX 50714223 50714287 -115936009 - B1F SINE Alu -82 67 1 5 971 22 0 0 0 chrX 50714355 50714377 -115935919 + AT_rich Low_complexity Low_complexity 1 22 0 5 971 331 308 55 83 chrX 50714768 50714780 -115935516 + B1F SINE Alu 7 143 -2 5 971 479 273 0 62 chrX 50714780 50714909 -115935387 + ID_B1 SINE B4 102 222 -2 5 971 319 302 34 0 chrX 50715380 50715499 -115934797 + L1MC LINE L1 5717 5839 -2043 5 971 212 271 102 0 chrX 50715653 50715712 -115934584 + ID4 SINE ID 8 72 -11 5 971 236 194 0 15 chrX 50715870 50715890 -115934406 + A-rich Low_complexity Low_complexity 1 20 0 5 971 1209 35 14 21 chrX 50715890 50716035 -115934261 + B1_Mus2 SINE Alu 4 147 0 5 971 236 194 0 15 chrX 50716035 50716082 -115934214 + A-rich Low_complexity Low_complexity 21 66 0 5 971 367 290 43 21 chrX 50716099 50716240 -115934056 + B1_Mur3 SINE Alu 5 148 -1 5 971 1509 55 11 16 chrX 50717027 50717213 -115933083 + B2_Mm1t SINE B2 2 186 -7 5 971 412 291 9 9 chrX 50717593 50717704 -115932592 - PB1D10 SINE Alu -3 114 4 5 971 378 289 10 20 chrX 50718422 50718521 -115931775 + PB1D10 SINE Alu 2 99 -18 5 971 621 240 20 27 chrX 50718539 50718689 -115931607 + B1F2 SINE Alu 1 149 0 5 971 345 197 246 0 chrX 50718690 50718804 -115931492 + B1F SINE Alu 10 148 -1 5 971 387 41 0 0 chrX 50718805 50718854 -115931442 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 971 312 256 39 0 chrX 50718867 50718945 -115931351 + ID4 SINE ID 3 83 0 5 971 636 240 93 0 chrX 50718983 50719112 -115931184 + B1F2 SINE Alu 3 143 -6 5 971 665 257 27 20 chrX 50719143 50719290 -115931006 + B1_Mur1 SINE Alu 2 149 0 5 971 624 221 28 21 chrX 50719493 50719636 -115930660 + B1_Mur1 SINE Alu 4 147 -2 5 971 221 139 23 0 chrX 50719744 50719787 -115930509 + A-rich Low_complexity Low_complexity 2 45 0 5 971 254 26 53 0 chrX 50719861 50719899 -115930397 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 5 971 431 313 59 15 chrX 50720092 50720228 -115930068 + MER5A DNA MER1_type 48 189 0 5 971 312 366 85 31 chrX 50720555 50720778 -115929518 + MamRep605 Unknown Unknown 510 744 -132 5 971 471 204 10 10 chrX 50721051 50721150 -115929146 - B1_Mur1 SINE Alu -1 148 50 5 971 627 261 15 0 chrX 50721269 50721403 -115928893 + B1F SINE Alu 4 139 -10 5 971 253 75 23 70 chrX 50721717 50721760 -115928536 - B1_Mur2 SINE Alu -27 122 82 5 971 597 194 27 36 chrX 50721816 50721928 -115928368 - PB1D9 SINE Alu -8 112 2 5 971 235 228 29 107 chrX 50724245 50724256 -115926040 + MT2B2 LTR ERVL 156 250 -334 6 971 388 250 22 0 chrX 50724256 50724348 -115925948 + PB1D10 SINE Alu 1 94 -23 6 971 333 257 52 17 chrX 50724410 50724525 -115925771 + PB1D9 SINE Alu 1 119 -1 6 971 218 136 62 175 chrX 50724631 50724711 -115925585 + B1_Mur3 SINE Alu 78 148 -1 6 972 460 256 116 0 chrX 50725003 50725132 -115925164 - B1F2 SINE Alu -1 148 5 6 972 2442 79 32 118 chrX 50725291 50725724 -115924572 + MTA_Mm LTR MaLR 1 396 0 6 972 2202 107 136 18 chrX 50726287 50726669 -115923627 - MT2B LTR ERVL -173 428 2 6 972 1097 48 6 109 chrX 50726669 50726834 -115923462 + B1_Mus1 SINE Alu 1 148 0 6 972 210 37 0 0 chrX 50726834 50726861 -115923435 + (CAA)n Simple_repeat Simple_repeat 1 27 0 6 972 546 91 0 0 chrX 50726859 50726936 -115923360 + (GAAA)n Simple_repeat Simple_repeat 3 79 0 6 972 333 309 56 16 chrX 50727220 50727345 -115922951 - RMER15 LTR ERVL -65 510 381 6 972 513 0 0 0 chrX 50727460 50727517 -115922779 + (TTTTG)n Simple_repeat Simple_repeat 1 57 0 6 972 868 241 59 0 chrX 50727802 50728005 -115922291 - B3 SINE B2 0 216 2 6 972 402 21 0 0 chrX 50728352 50728399 -115921897 + (TC)n Simple_repeat Simple_repeat 1 47 0 6 972 606 230 37 20 chrX 50728409 50728590 -115921706 - L1MA4 LINE L1 -353 5944 5764 6 972 1315 98 22 0 chrX 50728704 50728888 -115921408 + B2_Mm1a SINE B2 1 188 -5 6 972 510 17 0 0 chrX 50729645 50729704 -115920592 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 972 1071 97 0 0 chrX 50730002 50730156 -115920140 + (TTTC)n Simple_repeat Simple_repeat 2 155 0 6 972 1160 57 0 0 chrX 50730169 50730310 -115919986 + B1_Mus1 SINE Alu 1 141 -7 6 972 306 0 0 0 chrX 50730313 50730347 -115919949 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 6 972 345 146 0 0 chrX 50730362 50730417 -115919879 - B2_Mm2 SINE B2 -94 101 47 6 972 1047 122 85 0 chrX 50730468 50730632 -115919664 - B2_Mm1t SINE B2 -14 179 2 6 972 755 221 126 0 chrX 50730953 50731143 -115919153 - B3 SINE B2 0 216 3 6 972 399 127 0 0 chrX 50731148 50731211 -115919085 + (TTTTC)n Simple_repeat Simple_repeat 2 64 0 6 972 640 232 7 21 chrX 50731225 50731366 -115918930 - B1_Mur2 SINE Alu -10 139 1 6 972 245 279 22 122 chrX 50731381 50731520 -115918776 - PB1 SINE Alu -2 125 1 6 972 627 263 69 41 chrX 50731784 50732002 -115918294 + ID_B1 SINE B4 1 224 0 6 972 353 255 127 108 chrX 50732233 50732252 -115918044 - B4 SINE B4 -53 239 152 6 972 643 184 111 8 chrX 50732252 50732378 -115917918 - B1_Mur1 SINE Alu -5 144 6 6 972 353 255 127 108 chrX 50732378 50732391 -115917905 - B4 SINE B4 -53 151 79 6 972 308 291 25 0 chrX 50732473 50732552 -115917744 - PB1D10 SINE Alu -36 81 1 6 972 629 250 70 6 chrX 50732816 50732973 -115917323 + B3A SINE B2 7 173 -25 6 972 283 304 0 0 chrX 50733604 50733673 -115916623 + RSINE1 SINE B4 51 119 -46 6 972 23 54 0 0 chrX 50733747 50733784 -115916512 + AT_rich Low_complexity Low_complexity 1 37 0 6 972 412 374 0 33 chrX 50733884 50734036 -115916260 + B1F2 SINE Alu 3 149 0 6 972 527 198 85 0 chrX 50734301 50734407 -115915889 - PB1D9 SINE Alu -5 115 1 6 972 318 265 26 111 chrX 50734607 50734760 -115915536 + B1F1 SINE Alu 2 141 -8 6 972 782 158 27 6 chrX 50735158 50735461 -115914835 + CT-rich Low_complexity Low_complexity 1 309 0 6 972 432 0 0 0 chrX 50735458 50735506 -115914790 + (TC)n Simple_repeat Simple_repeat 1 48 0 6 972 953 284 11 35 chrX 50735533 50735818 -115914478 - B4A SINE B4 -6 286 9 6 972 270 0 0 0 chrX 50736781 50736811 -115913485 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 972 306 0 0 0 chrX 50736811 50736844 -115913452 + (GA)n Simple_repeat Simple_repeat 2 35 0 6 972 657 237 29 7 chrX 50736844 50736980 -115913316 - B3A SINE B2 -51 147 9 6 972 451 289 34 40 chrX 50737007 50737155 -115913141 - B1F SINE Alu 0 149 3 6 972 402 328 9 0 chrX 50737333 50737449 -115912847 - PB1D10 SINE Alu 0 117 1 6 972 269 214 0 18 chrX 50737705 50737762 -115912534 - PB1D9 SINE Alu -2 118 63 6 972 248 77 26 0 chrX 50738086 50738125 -115912171 + (TCC)n Simple_repeat Simple_repeat 3 42 0 6 972 672 212 15 0 chrX 50738181 50738313 -115911983 + ID_B1 SINE B4 91 224 0 6 972 726 203 7 42 chrX 50738455 50738599 -115911697 - B1_Mur1 SINE Alu -8 141 3 6 972 500 68 28 37 chrX 50738647 50738754 -115911542 + (TA)n Simple_repeat Simple_repeat 2 107 0 6 972 302 275 0 0 chrX 50738813 50738882 -115911414 - ID4 SINE ID -14 69 1 6 972 233 352 46 15 chrX 50739001 50739037 -115911259 - ID_B1 SINE B4 -8 216 87 6 972 234 326 22 11 chrX 50739037 50739127 -115911169 - PB1D10 SINE Alu -21 96 6 6 972 236 154 31 0 chrX 50739150 50739215 -115911081 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 6 972 261 267 107 0 chrX 50739240 50739315 -115910981 - ID4 SINE ID 0 83 1 6 972 672 218 67 15 chrX 50740062 50740197 -115910099 - B1_Mur2 SINE Alu -4 145 4 6 972 303 299 76 66 chrX 50740205 50740234 -115910062 - MIR SINE MIR -44 218 186 6 972 461 301 90 7 chrX 50740234 50740378 -115909918 - RSINE1 SINE B4 -6 159 4 6 972 392 264 21 83 chrX 50740378 50740551 -115909745 - MIRb SINE MIR -77 185 21 6 972 1165 76 0 0 chrX 50740911 50741056 -115909240 - B1_Mm SINE Alu -1 146 2 6 972 22 0 0 0 chrX 50741506 50741528 -115908768 + AT_rich Low_complexity Low_complexity 1 22 0 6 972 474 271 0 17 chrX 50741649 50741769 -115908527 + B1F1 SINE Alu 24 141 -8 6 972 213 39 0 0 chrX 50741855 50741881 -115908415 + (CAAG)n Simple_repeat Simple_repeat 1 26 0 6 972 453 224 158 16 chrX 50742133 50742260 -115908036 + B1_Mur1 SINE Alu 5 149 0 6 972 395 263 59 22 chrX 50742260 50742395 -115907901 + B1F SINE Alu 1 141 -8 6 972 311 270 0 0 chrX 50742423 50742486 -115907810 + ID4 SINE ID 13 75 -8 6 972 333 68 0 0 chrX 50742892 50742936 -115907360 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 972 522 0 0 0 chrX 50742936 50742993 -115907303 + (GA)n Simple_repeat Simple_repeat 1 58 0 6 972 528 250 121 0 chrX 50742996 50743136 -115907160 - B3A SINE B2 -41 157 1 6 972 412 183 122 0 chrX 50743140 50743222 -115907074 - B1_Mur3 SINE Alu -56 93 2 6 972 187 318 114 0 chrX 50743242 50743330 -115906966 - L2a LINE L2 -299 3127 3030 6 972 463 246 321 6 chrX 50743634 50743802 -115906494 + ID_B1 SINE B4 4 224 0 6 972 736 259 8 13 chrX 50743811 50744008 -115906288 + B3A SINE B2 3 199 -17 6 972 779 192 0 46 chrX 50744029 50744182 -115906114 - B1_Mur3 SINE Alu -2 147 2 6 972 243 0 0 0 chrX 50744202 50744229 -115906067 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 6 972 252 290 210 0 chrX 50744236 50744336 -115905960 + ID_B1 SINE B4 100 220 -4 6 972 472 302 117 9 chrX 50744395 50744609 -115905687 + MLT1D LTR MaLR 134 370 -135 6 972 932 264 45 109 chrX 50744761 50745203 -115905093 + MLT2D LTR ERVL 1 414 0 6 972 194 108 54 0 chrX 50745263 50745300 -115904996 + CT-rich Low_complexity Low_complexity 2 40 0 6 972 516 263 8 8 chrX 50745395 50745514 -115904782 + RSINE1 SINE B4 3 121 -44 6 972 794 268 88 15 chrX 50745514 50745776 -115904520 + Lx8 LINE L1 7189 7469 -4 6 972 396 0 0 0 chrX 50745822 50745866 -115904430 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 972 635 321 73 15 chrX 50745904 50746176 -115904120 + B4A SINE B4 1 288 -4 6 972 1185 64 0 0 chrX 50746249 50746390 -115903906 - B1_Mus2 SINE Alu -5 142 2 6 972 1289 85 10 16 chrX 50746395 50746587 -115903709 - MTB_Mm LTR MaLR -8 399 209 6 972 2366 121 13 0 chrX 50746592 50746981 -115903315 - ORR1A2-int LTR MaLR -1569 394 1 6 972 2087 123 28 0 chrX 50746981 50747299 -115902997 - ORR1A2 LTR MaLR 0 327 1 6 972 317 247 25 0 chrX 50747353 50747434 -115902862 + ID_B1 SINE B4 87 169 -55 6 972 311 291 45 0 chrX 50747434 50747458 -115902838 + PB1D10 SINE Alu 6 115 -2 6 972 415 264 47 12 chrX 50747506 50747675 -115902621 - MLT1D LTR MaLR -13 492 318 6 972 311 244 23 47 chrX 50747712 50747798 -115902498 - MLT1D LTR MaLR -296 209 126 6 972 308 237 82 10 chrX 50748111 50748209 -115902087 + PB1D9 SINE Alu 10 114 -6 6 972 416 202 0 0 chrX 50748221 50748300 -115901996 + B3A SINE B2 1 79 -119 6 972 389 326 36 56 chrX 50748300 50748416 -115901880 + ID_B1 SINE B4 1 191 -33 6 972 5445 108 23 25 chrX 50748452 50749310 -115900986 + Lx2 LINE L1 6140 6996 -1 6 972 1437 50 11 21 chrX 50749419 50749605 -115900691 - B2_Mm2 SINE B2 -8 187 4 6 972 1104 83 0 0 chrX 50749735 50749879 -115900417 + B1_Mm SINE Alu 1 144 -3 6 972 225 0 0 0 chrX 50749879 50749904 -115900392 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 6 972 525 32 0 0 chrX 50749980 50750043 -115900253 + (TATG)n Simple_repeat Simple_repeat 2 64 0 6 972 380 154 0 49 chrX 50750043 50750116 -115900180 - PB1D9 SINE Alu -9 111 43 6 972 366 162 0 0 chrX 50750118 50750221 -115900075 + CT-rich Low_complexity Low_complexity 1 103 0 6 972 225 211 0 50 chrX 50750222 50750282 -115900014 - PB1D9 SINE Alu -61 59 3 6 972 324 0 0 0 chrX 50750294 50750330 -115899966 + (TTA)n Simple_repeat Simple_repeat 1 36 0 6 972 271 274 21 21 chrX 50750330 50750418 -115899878 - B1F SINE Alu -8 141 53 6 972 2580 147 27 10 chrX 50751250 50751661 -115898635 + MTC LTR MaLR 2 419 -2 6 972 3453 28 2 2 chrX 50752588 50752984 -115897312 + MTA_Mm LTR MaLR 1 396 0 7 972 489 275 21 28 chrX 50753032 50753174 -115897122 - ID_B1 SINE B4 -3 221 81 7 972 683 241 21 0 chrX 50753178 50753323 -115896973 - B1F SINE Alu 0 149 2 7 972 1601 217 108 0 chrX 50753474 50753852 -115896444 - MTD LTR MaLR 0 419 1 7 972 761 88 176 0 chrX 50754286 50754411 -115895885 + B1_Mus1 SINE Alu 2 148 0 7 972 211 347 67 0 chrX 50755296 50755371 -115894925 - MIRm SINE MIR -118 158 79 7 972 436 284 8 8 chrX 50755377 50755494 -115894802 - MER2 DNA MER2_type -5 340 224 7 972 315 150 0 0 chrX 50755519 50755579 -115894717 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 7 972 353 272 9 19 chrX 50755751 50755856 -115894440 + PB1D10 SINE Alu 4 107 -10 7 972 21 0 0 0 chrX 50756131 50756152 -115894144 + AT_rich Low_complexity Low_complexity 1 21 0 7 972 534 274 0 30 chrX 50756433 50756565 -115893731 + B1F SINE Alu 17 144 -5 7 972 764 261 26 35 chrX 50757428 50757647 -115892649 + Lx6 LINE L1 7227 7443 -17 7 972 304 0 0 0 chrX 50757647 50757688 -115892608 + L1_Mus2 LINE L1 6525 6565 -1 7 972 22 0 0 0 chrX 50757709 50757731 -115892565 + AT_rich Low_complexity Low_complexity 1 22 0 7 972 4138 91 46 17 chrX 50757922 50758504 -115891792 - MT2B LTR ERVL -2 599 1 7 972 656 229 255 34 chrX 50758504 50758609 -115891687 - Lx5 LINE L1 -656 6804 6651 7 972 654 13 0 0 chrX 50758609 50758684 -115891612 + (TC)n Simple_repeat Simple_repeat 2 76 0 7 972 932 258 152 35 chrX 50758684 50759053 -115891243 - Lx5 LINE L1 -810 6650 6041 7 972 1178 197 123 26 chrX 50759071 50759195 -115891101 + Lx5 LINE L1 5673 5800 -1250 7 972 1163 82 7 0 chrX 50759195 50759342 -115890954 + B1_Mus1 SINE Alu 1 148 0 7 972 1178 197 123 26 chrX 50759342 50759525 -115890771 + Lx5 LINE L1 5801 6010 -1040 7 972 271 170 38 0 chrX 50759683 50759736 -115890560 + RSINE1 SINE B4 2 56 -109 7 972 573 241 76 15 chrX 50759755 50759953 -115890343 + MTD LTR MaLR 210 419 0 7 972 486 301 0 0 chrX 50759953 50760065 -115890231 - PB1 SINE Alu -15 112 1 7 972 394 378 38 19 chrX 50760405 50760672 -115889624 - ORR1D2 LTR MaLR -98 272 1 7 972 503 211 38 81 chrX 50760717 50760877 -115889419 - MLT1B LTR MaLR -72 318 166 7 972 390 91 0 0 chrX 50761035 50761090 -115889206 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 7 972 331 198 107 68 chrX 50761116 50761219 -115889077 - ID_B1 SINE B4 -13 211 105 7 972 449 300 64 75 chrX 50761262 50761557 -115888739 - B4 SINE B4 0 292 1 7 972 244 266 48 105 chrX 50761585 50761690 -115888606 - PB1D10 SINE Alu -6 111 13 7 972 341 231 87 0 chrX 50761691 50761795 -115888501 - MLT1B LTR MaLR -193 197 85 7 972 494 236 18 0 chrX 50761801 50761911 -115888385 + PB1D9 SINE Alu 2 113 -7 7 972 267 226 19 10 chrX 50761913 50762016 -115888280 + GA-rich Low_complexity Low_complexity 5 108 0 7 972 297 250 18 18 chrX 50762934 50763044 -115887252 + CT-rich Low_complexity Low_complexity 1 110 0 7 972 216 222 23 163 chrX 50763070 50763156 -115887140 - B1F SINE Alu -9 140 67 7 972 444 51 0 0 chrX 50763168 50763227 -115887069 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 972 1323 150 43 43 chrX 50763293 50763571 -115886725 + RLTR11A LTR ERVK 18 295 -233 7 972 1183 82 0 0 chrX 50763574 50763721 -115886575 + B1_Mus2 SINE Alu 1 147 0 7 972 200 40 0 0 chrX 50763721 50763746 -115886550 + (A)n Simple_repeat Simple_repeat 1 25 0 7 972 453 81 0 0 chrX 50763752 50763814 -115886482 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 7 972 1132 202 61 7 chrX 50763815 50764109 -115886187 + RLTR11A LTR ERVK 216 525 -3 7 972 478 271 7 28 chrX 50764421 50764565 -115885731 - B1F1 SINE Alu -8 141 1 7 972 201 167 0 0 chrX 50764968 50765004 -115885292 + T-rich Low_complexity Low_complexity 1 36 0 7 972 4366 251 143 37 chrX 50765004 50766253 -115884043 - Lx9 LINE L1 -32 7612 6255 7 972 914 133 7 20 chrX 50766253 50766399 -115883897 + B1_Mur4 SINE Alu 1 144 -6 7 972 4366 251 143 37 chrX 50766399 50766735 -115883561 - Lx9 LINE L1 -1390 6254 5826 7 972 1148 68 0 0 chrX 50766735 50766882 -115883414 + B1_Mus1 SINE Alu 2 148 0 7 972 4366 200 61 57 chrX 50766882 50767323 -115882973 - Lx9 LINE L1 -1819 5825 5341 7 972 2248 172 32 0 chrX 50767331 50767731 -115882565 - MTC LTR MaLR -8 413 1 7 972 4215 161 108 22 chrX 50767731 50768667 -115881629 - MTC-int LTR MaLR 0 1258 243 7 972 14360 47 6 18 chrX 50768676 50770662 -115879634 - L1Md_F2 LINE L1 -11 6571 4591 7 972 1597 32 27 0 chrX 50770662 50770847 -115879449 + B2_Mm1t SINE B2 1 190 -3 7 972 14360 65 6 35 chrX 50770847 50771504 -115878792 - L1Md_F2 LINE L1 -1293 4590 3985 7 972 2855 3 0 0 chrX 50772145 50772451 -115877845 - MERVL-int LTR ERVL -3324 2161 1856 7 972 20335 77 1 1 chrX 50772454 50776454 -115873842 - L1Md_F2 LINE L1 -1904 3979 98 7 972 652 159 166 39 chrX 50776456 50776629 -115873667 - MTC-int LTR MaLR -1000 258 56 7 972 279 0 0 0 chrX 50776629 50776660 -115873636 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 972 652 159 166 39 chrX 50776660 50776715 -115873581 - MTC-int LTR MaLR -1203 55 1 7 972 1153 154 8 96 chrX 50776713 50776964 -115873332 - MTC LTR MaLR -2 419 191 7 972 2020 200 129 76 chrX 50776972 50777805 -115872491 - RMER6C LTR ERVK 0 720 1 7 972 991 129 73 0 chrX 50777805 50777979 -115872317 - MTC LTR MaLR -231 190 4 7 972 1520 53 16 11 chrX 50777980 50778171 -115872125 + B2_Mm2 SINE B2 1 192 -3 7 972 893 112 0 0 chrX 50778210 50778335 -115871961 - B1_Mm SINE Alu -21 126 2 7 972 434 188 8 138 chrX 50778224 50778354 -115871942 - MT2B LTR ERVL -337 264 152 7 972 1309 238 128 21 chrX 50778371 50778800 -115871496 - Lx9 LINE L1 -541 5306 4832 7 972 1325 147 5 9 chrX 50778800 50779020 -115871276 - ORR1A2 LTR MaLR -108 219 1 7 972 1746 146 50 0 chrX 50779020 50779297 -115870999 - ORR1A4 LTR MaLR -38 291 1 7 972 264 360 11 22 chrX 50779380 50779471 -115870825 - PB1D7 SINE Alu -25 95 6 7 972 563 306 70 40 chrX 50779480 50779528 -115870768 - B3A SINE B2 -1 215 169 7 972 414 0 0 0 chrX 50779528 50779574 -115870722 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 972 563 318 46 6 chrX 50779574 50779726 -115870570 - B3A SINE B2 -30 168 10 7 972 413 281 35 111 chrX 50779736 50780052 -115870244 - L1ME3A LINE L1 -269 5904 5613 7 972 6036 70 31 14 chrX 50780136 50781166 -115869130 + Lx3_Mus LINE L1 5411 6469 -540 7 972 597 252 7 7 chrX 50781331 50781467 -115868829 - B1F SINE Alu -13 136 1 7 972 854 283 79 29 chrX 50781775 50782052 -115868244 - B4 SINE B4 0 292 2 7 972 404 274 36 36 chrX 50782063 50782203 -115868093 - B1F SINE Alu -8 141 2 7 972 235 300 29 0 chrX 50782556 50782626 -115867670 - MLT1B LTR MaLR 0 390 319 7 972 390 352 31 0 chrX 50782619 50782747 -115867549 - B1F SINE Alu -5 144 13 7 972 2070 107 65 0 chrX 50782751 50783060 -115867236 + ORR1A4 LTR MaLR 1 329 0 7 972 292 241 321 18 chrX 50783149 50783314 -115866982 - MLT1B LTR MaLR -175 215 1 7 972 459 52 0 0 chrX 50783553 50783611 -115866685 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 7 972 5048 50 32 0 chrX 50783613 50784232 -115866064 - L1Md_F2 LINE L1 -19 6563 5925 7 972 2373 32 25 0 chrX 50784232 50784517 -115865779 + L1Md_F2 LINE L1 5656 5947 -637 7 972 570 336 0 0 chrX 50784671 50784817 -115865479 - ID_B1 SINE B4 -2 222 77 7 972 519 326 124 5 chrX 50784881 50785066 -115865230 - ID_B1 SINE B4 -15 209 3 7 972 409 303 73 8 chrX 50785622 50785745 -115864551 + RSINE1 SINE B4 2 132 -33 7 972 384 40 0 0 chrX 50785745 50785795 -115864501 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 7 972 569 235 41 16 chrX 50786014 50786135 -115864161 + RSINE1 SINE B4 4 127 -38 7 972 22 56 0 0 chrX 50786410 50786446 -115863850 + AT_rich Low_complexity Low_complexity 1 36 0 7 972 247 311 37 19 chrX 50786538 50786646 -115863650 - Lx8 LINE L1 0 7473 7364 7 972 339 267 13 196 chrX 50786885 50787109 -115863187 - B3A SINE B2 -14 184 2 7 972 432 302 94 8 chrX 50787116 50787243 -115863053 - ID_B1 SINE B4 -8 216 79 7 972 229 231 169 0 chrX 50787292 50787357 -115862939 + BC1_Mm scRNA scRNA 3 78 -74 7 972 1196 57 0 0 chrX 50789283 50789424 -115860872 + B1_Mus1 SINE Alu 2 142 -6 7 972 387 0 0 0 chrX 50789426 50789469 -115860827 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 7 972 192 214 0 0 chrX 50789491 50789547 -115860749 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 972 681 152 49 77 chrX 50789987 50790130 -115860166 + B1_Mus1 SINE Alu 1 139 -9 7 972 234 0 0 0 chrX 50790153 50790179 -115860117 + (GGA)n Simple_repeat Simple_repeat 3 28 0 7 972 1128 171 281 10 chrX 50790313 50790429 -115859867 + ORR1C2 LTR MaLR 1 165 -219 7 972 771 69 0 0 chrX 50790429 50790531 -115859765 + (TC)n Simple_repeat Simple_repeat 1 102 0 7 972 1128 171 281 10 chrX 50790531 50790716 -115859580 + ORR1C2 LTR MaLR 166 383 -1 7 972 1292 92 32 0 chrX 50790890 50791075 -115859221 - B2_Mm1t SINE B2 0 193 3 7 972 1078 94 0 0 chrX 50791257 50791395 -115858901 - B1_Mus2 SINE Alu -9 138 1 7 972 778 184 0 20 chrX 50791519 50791669 -115858627 + B1F2 SINE Alu 3 149 0 7 972 243 79 0 0 chrX 50791672 50791710 -115858586 + (A)n Simple_repeat Simple_repeat 1 38 0 7 972 1095 65 7 0 chrX 50792139 50792278 -115858018 + B1_Mus1 SINE Alu 1 140 -8 7 972 1892 114 3 21 chrX 50792279 50792566 -115857730 - RLTR22_Mus LTR ERVK -1526 282 1 7 972 216 178 22 0 chrX 50792684 50792729 -115857567 - B4 SINE B4 -245 47 2 7 972 559 308 46 46 chrX 50793045 50793239 -115857057 - B3A SINE B2 -2 196 3 7 972 1242 117 0 58 chrX 50793425 50793476 -115856820 - ORR1A3 LTR MaLR 0 326 277 7 972 1440 74 16 5 chrX 50793476 50793666 -115856630 - B2_Mm2 SINE B2 -3 192 1 7 972 1242 117 0 58 chrX 50793666 50793805 -115856491 - ORR1A3 LTR MaLR -50 276 147 7 972 1204 200 270 73 chrX 50793800 50794292 -115856004 + MT2B LTR ERVL 13 601 0 7 972 532 310 20 7 chrX 50794649 50794795 -115855501 + B3A SINE B2 9 156 -42 7 972 459 0 0 0 chrX 50794796 50794847 -115855449 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 972 1053 139 0 0 chrX 50795070 50795243 -115855053 + (TTCTC)n Simple_repeat Simple_repeat 5 177 0 7 972 500 81 14 0 chrX 50795246 50795320 -115854976 + (TTTTC)n Simple_repeat Simple_repeat 2 76 0 7 972 1177 54 0 20 chrX 50795321 50795471 -115854825 - B1_Mus2 SINE Alu 0 147 1 7 972 327 279 63 0 chrX 50795976 50796055 -115854241 + RSINE1 SINE B4 3 86 -79 8 972 441 0 0 0 chrX 50796085 50796134 -115854162 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 972 304 260 0 14 chrX 50797318 50797392 -115852904 - RMER1C Other Other -325 1017 945 8 972 662 160 0 2 chrX 50797384 50797501 -115852795 + RMER1C Other Other 1228 1333 -9 8 972 1392 23 6 0 chrX 50797503 50797676 -115852620 + L1Md_F2 LINE L1 6405 6578 -4 8 972 852 226 18 6 chrX 50797869 50798038 -115852258 + B3A SINE B2 1 171 -27 8 972 251 355 78 21 chrX 50798371 50798497 -115851799 + PB1D10 SINE Alu 1 137 -12 8 972 901 122 57 7 chrX 50798497 50798638 -115851658 + B1_Mus1 SINE Alu 1 148 0 8 972 229 355 78 21 chrX 50798638 50798652 -115851644 + B1_Mur3 SINE Alu 138 149 0 8 972 290 33 15 90 chrX 50798654 50798679 -115851617 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 8 972 1197 68 0 0 chrX 50798679 50798826 -115851470 + B1_Mus1 SINE Alu 2 148 0 8 972 290 33 15 90 chrX 50798826 50798867 -115851429 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 8 972 467 0 35 0 chrX 50798886 50798944 -115851352 + (GGGA)n Simple_repeat Simple_repeat 1 60 0 8 972 284 291 113 84 chrX 50799460 50799839 -115850457 + L1MD1 LINE L1 5829 6218 -24 8 972 492 198 56 9 chrX 50799856 50799963 -115850333 - Lx9 LINE L1 -186 7458 7347 8 972 3306 46 5 0 chrX 50799965 50800359 -115849937 - MTA_Mm LTR MaLR 0 396 1 8 972 725 156 24 8 chrX 50800375 50800498 -115849798 - B1_Mus2 SINE Alu -21 126 2 8 972 397 308 99 8 chrX 50800387 50800518 -115849778 - B4 SINE B4 -87 205 63 8 972 418 260 69 20 chrX 50800532 50800634 -115849662 - ID_B1 SINE B4 -6 218 112 8 972 273 347 32 24 chrX 50800648 50800772 -115849524 - B1F SINE Alu -22 127 3 8 972 369 321 90 24 chrX 50801026 50801192 -115849104 + MER67B LTR ERV1 305 481 -180 8 972 6775 70 13 1 chrX 50801212 50802080 -115848216 - L1_Mus1 LINE L1 -1 6566 5689 8 972 259 274 24 0 chrX 50802142 50802226 -115848070 - BC1_Mm scRNA scRNA -53 99 14 8 972 249 75 57 0 chrX 50802307 50802360 -115847936 + (CAA)n Simple_repeat Simple_repeat 2 57 0 8 972 1073 242 98 20 chrX 50802834 50803129 -115847167 - ORR1D2 LTR MaLR -50 320 3 8 972 635 84 11 0 chrX 50803455 50803550 -115846746 + (TG)n Simple_repeat Simple_repeat 1 96 0 8 972 299 339 27 0 chrX 50803670 50803782 -115846514 - B1_Mus1 SINE Alu 0 148 34 8 972 1307 55 6 0 chrX 50804208 50804371 -115845925 + MTA_Mm LTR MaLR 233 396 0 8 972 8930 54 3 0 chrX 50804371 50805466 -115844830 + MTA_Mm-int LTR MaLR 1 1098 0 8 972 3470 28 5 0 chrX 50805466 50805860 -115844436 + MTA_Mm LTR MaLR 1 396 0 8 972 772 241 188 19 chrX 50805861 50806127 -115844169 + MTD LTR MaLR 1 311 -108 8 972 942 225 0 16 chrX 50806174 50806364 -115843932 - MTD LTR MaLR -232 187 1 8 972 468 268 227 23 chrX 50806735 50806907 -115843389 - B3 SINE B2 -9 207 1 8 972 458 170 31 21 chrX 50807077 50807173 -115843123 - MTE2a LTR MaLR 0 379 283 8 972 452 259 143 36 chrX 50807181 50807349 -115842947 + MTD LTR MaLR 234 419 0 8 972 299 305 30 78 chrX 50807988 50808155 -115842141 - RLTR28B LTR ERVL -13 511 353 8 972 699 236 68 17 chrX 50808235 50808412 -115841884 - RLTR28B LTR ERVL -295 186 1 8 972 352 277 24 0 chrX 50808783 50808866 -115841430 + PB1 SINE Alu 14 98 -29 8 972 229 335 32 91 chrX 50808996 50809183 -115841113 - MER20B DNA MER1_type -143 640 465 8 972 322 286 26 129 chrX 50809157 50809350 -115840946 + MER3 DNA MER1_type 36 208 -1 8 972 5673 71 17 47 chrX 50810547 50810619 -115839677 - RLTR13C2 LTR ERVK -20 788 726 8 972 3041 94 28 64 chrX 50810619 50811119 -115839177 + RLTR45 LTR ERVK 1 482 0 8 972 5673 71 17 47 chrX 50811119 50811351 -115838945 - RLTR13C2 LTR ERVK -83 725 499 8 972 1129 76 0 0 chrX 50811351 50811495 -115838801 + B1_Mus2 SINE Alu 3 146 -1 8 972 5673 71 17 47 chrX 50811495 50811506 -115838790 - RLTR13C2 LTR ERVK -310 498 498 8 972 299 44 22 0 chrX 50811506 50811551 -115838745 + (CAAA)n Simple_repeat Simple_repeat 1 46 0 8 972 5673 71 17 47 chrX 50811551 50812045 -115838251 - RLTR13C2 LTR ERVK -310 498 1 8 972 633 304 0 12 chrX 50812337 50812500 -115837796 + RSINE1 SINE B4 3 163 -2 8 972 22 35 0 0 chrX 50812512 50812541 -115837755 + AT_rich Low_complexity Low_complexity 1 29 0 8 972 861 89 0 0 chrX 50816362 50816486 -115833810 + (CA)n Simple_repeat Simple_repeat 2 125 0 8 972 510 17 0 0 chrX 50816849 50816908 -115833388 + (GA)n Simple_repeat Simple_repeat 2 60 0 8 972 255 60 19 39 chrX 50817046 50817098 -115833198 + (GA)n Simple_repeat Simple_repeat 2 52 0 8 972 222 284 0 29 chrX 50817927 50817996 -115832300 + G-rich Low_complexity Low_complexity 1 67 0 8 972 420 20 0 0 chrX 50822641 50822690 -115827606 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 972 364 347 20 25 chrX 50822968 50823166 -115827130 + B3 SINE B2 1 197 -19 8 972 710 185 37 0 chrX 50823487 50823628 -115826668 + B1_Mus1 SINE Alu 1 147 -1 8 972 182 191 0 21 chrX 50823694 50823742 -115826554 + GA-rich Low_complexity Low_complexity 3 49 0 8 972 338 310 82 27 chrX 50823742 50823888 -115826408 + HAL1-3A_ME LINE L1 2286 2439 -419 8 972 648 274 5 23 chrX 50823888 50824337 -115825959 + GA-rich Low_complexity Low_complexity 1 440 0 8 972 401 294 11 43 chrX 50824392 50824577 -115825719 + GA-rich Low_complexity Low_complexity 1 179 0 8 972 304 307 76 51 chrX 50824600 50824758 -115825538 + HAL1-3A_ME LINE L1 2286 2447 -411 8 972 203 235 22 45 chrX 50824762 50824851 -115825445 + GA-rich Low_complexity Low_complexity 2 88 0 8 972 278 190 0 48 chrX 50824868 50824973 -115825323 + GA-rich Low_complexity Low_complexity 4 103 0 8 972 309 362 73 80 chrX 50825086 50825244 -115825052 + HAL1-3A_ME LINE L1 2004 2163 -695 8 972 1234 61 0 0 chrX 50825244 50825391 -115824905 - B1_Mus1 SINE Alu 0 148 2 8 972 309 362 73 80 chrX 50825391 50825668 -115824628 + HAL1-3A_ME LINE L1 2164 2436 -422 8 972 322 206 137 86 chrX 50825817 50825934 -115824362 + HAL1-3A_ME LINE L1 2083 2205 -653 8 972 333 314 22 39 chrX 50825945 50826127 -115824169 + GA-rich Low_complexity Low_complexity 1 179 0 8 972 401 294 13 53 chrX 50826157 50826576 -115823720 + GA-rich Low_complexity Low_complexity 1 401 0 8 972 300 338 45 45 chrX 50826691 50826846 -115823450 + HAL1-3A_ME LINE L1 2284 2438 -420 8 972 448 309 5 33 chrX 50826870 50827054 -115823242 + GA-rich Low_complexity Low_complexity 1 179 0 8 972 250 214 6 72 chrX 50827071 50827237 -115823059 + GA-rich Low_complexity Low_complexity 2 156 0 8 972 354 261 16 48 chrX 50827266 50827524 -115822772 + GA-rich Low_complexity Low_complexity 1 249 0 8 972 329 346 3 41 chrX 50827560 50827853 -115822443 + GA-rich Low_complexity Low_complexity 1 281 0 8 972 1116 82 0 7 chrX 50827856 50828003 -115822293 + B1_Mm SINE Alu 2 147 0 8 972 470 299 9 52 chrX 50828010 50828434 -115821862 + GA-rich Low_complexity Low_complexity 1 405 0 8 972 1164 62 7 0 chrX 50828434 50828579 -115821717 + B1_Mus2 SINE Alu 1 146 -1 8 972 207 0 0 0 chrX 50828584 50828607 -115821689 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 8 972 300 233 10 109 chrX 50828607 50828624 -115821672 + polypurine Low_complexity Low_complexity 162 177 0 8 972 242 356 0 22 chrX 50828684 50828819 -115821477 + GA-rich Low_complexity Low_complexity 3 134 0 8 973 7433 30 11 0 chrX 50878848 50879708 -115770588 + L1Md_T LINE L1 5714 6582 0 8 973 225 217 33 0 chrX 50880752 50880812 -115769484 + CT-rich Low_complexity Low_complexity 5 66 0 8 973 303 223 13 26 chrX 50880824 50880976 -115769320 + CT-rich Low_complexity Low_complexity 1 150 0 8 973 340 294 7 22 chrX 50880999 50881138 -115769158 + CT-rich Low_complexity Low_complexity 2 138 0 8 973 238 235 0 19 chrX 50881210 50881262 -115769034 - B3A SINE B2 -128 70 20 8 973 378 0 0 0 chrX 50882763 50882805 -115767491 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 973 505 312 0 0 chrX 50884218 50884359 -115765937 + B1F2 SINE Alu 2 142 -7 8 973 432 288 27 20 chrX 50887729 50887878 -115762418 - B3A SINE B2 -48 150 1 8 973 262 322 0 22 chrX 50887910 50887999 -115762297 - MLT1C LTR MaLR -314 153 67 8 973 330 250 14 0 chrX 50888234 50888306 -115761990 + B3 SINE B2 6 78 -138 8 973 725 208 0 0 chrX 50888493 50888623 -115761673 + B3 SINE B2 1 130 -86 8 973 1110 67 0 3 chrX 50889706 50889871 -115760425 + L1_Mm LINE L1 4592 4787 -1359 8 973 5517 43 0 3 chrX 50889871 50890526 -115759770 + L1Md_F2 LINE L1 5916 6568 -14 8 973 236 306 20 40 chrX 50890526 50890540 -115759756 + L1_Mm LINE L1 4788 4800 -1346 8 973 189 0 0 0 chrX 50892091 50892112 -115758184 + (A)n Simple_repeat Simple_repeat 1 21 0 8 973 6576 41 0 0 chrX 50893209 50893984 -115756312 + L1Md_T LINE L1 5808 6582 0 8 973 1087 78 0 0 chrX 50898031 50898173 -115752123 + B1_Mus1 SINE Alu 3 144 -4 8 973 302 0 26 0 chrX 50898175 50898213 -115752083 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 973 1073 288 37 37 chrX 50899748 50900184 -115750112 - RMER10A LTR ERVL -6 436 1 8 973 532 290 68 32 chrX 50900473 50900751 -115749545 - RMER15 LTR ERVL -14 561 274 8 973 2363 171 54 28 chrX 50902232 50902737 -115747559 + RMER15 LTR ERVL 22 531 -44 8 973 567 85 0 0 chrX 50902737 50902819 -115747477 + (TG)n Simple_repeat Simple_repeat 2 83 0 8 973 2363 171 54 28 chrX 50902819 50902850 -115747446 + RMER15 LTR ERVL 532 571 -4 8 973 315 374 64 6 chrX 50902851 50903007 -115747289 - ID_B1 SINE B4 -58 166 2 8 973 260 291 12 38 chrX 50903109 50903306 -115746990 - L1MD LINE L1 -672 5492 5298 8 973 1643 88 4 67 chrX 50904778 50905047 -115745249 - L1Md_F2 LINE L1 -4 6578 6327 8 973 282 236 14 2 chrX 50905314 50905410 -115744886 - B1_Mur3 SINE Alu -7 113 15 8 973 316 320 48 32 chrX 50905895 50906021 -115744275 - RLTR41 LTR ERV1 -80 366 239 8 973 52 50 0 0 chrX 50906350 50906430 -115743866 + AT_rich Low_complexity Low_complexity 1 80 0 8 973 245 326 43 43 chrX 50906841 50906979 -115743317 - B4 SINE B4 -146 146 9 8 973 485 58 0 14 chrX 50907169 50907239 -115743057 + (CATA)n Simple_repeat Simple_repeat 2 70 0 8 973 427 256 47 0 chrX 50907493 50907622 -115742674 - B1_Mus1 SINE Alu -8 140 6 8 973 505 42 28 0 chrX 50907639 50907711 -115742585 + (TC)n Simple_repeat Simple_repeat 2 75 0 8 973 526 160 0 62 chrX 50907726 50907839 -115742457 - B1_Mus2 SINE Alu -2 145 40 8 973 531 0 0 0 chrX 50908211 50908270 -115742026 + (TA)n Simple_repeat Simple_repeat 2 60 0 8 973 4326 62 9 9 chrX 50908369 50908925 -115741371 - L1Md_F2 LINE L1 0 6582 6027 8 973 3207 32 5 0 chrX 50908925 50909304 -115740992 + L1Md_F2 LINE L1 5624 6004 -578 8 973 216 0 0 0 chrX 50910757 50910781 -115739515 + (A)n Simple_repeat Simple_repeat 1 24 0 8 973 208 77 51 0 chrX 50910890 50910929 -115739367 + (CAA)n Simple_repeat Simple_repeat 2 42 0 8 973 273 400 32 0 chrX 50913876 50914061 -115736235 - B3 SINE B2 -24 192 2 9 973 324 250 182 39 chrX 50914154 50914308 -115735988 - B3 SINE B2 -4 212 37 9 973 206 207 16 32 chrX 50914843 50914968 -115735328 + (CAGAGA)n Simple_repeat Simple_repeat 4 126 0 9 973 537 276 14 7 chrX 50916015 50916161 -115734135 + RSINE1 SINE B4 5 151 -14 9 973 339 85 0 0 chrX 50916167 50916214 -115734082 + (CA)n Simple_repeat Simple_repeat 2 48 0 9 973 438 281 23 15 chrX 50916360 50916490 -115733806 - RSINE1 SINE B4 -31 134 4 9 973 2213 118 6 0 chrX 50916732 50917055 -115733241 + ORR1A2 LTR MaLR 1 325 -2 9 973 348 297 75 38 chrX 50917063 50917196 -115733100 - B1_Mur2 SINE Alu -4 145 8 9 973 351 239 15 15 chrX 50917368 50917504 -115732792 + (TATATG)n Simple_repeat Simple_repeat 3 138 0 9 973 313 157 25 150 chrX 50917593 50917708 -115732588 + B1F1 SINE Alu 13 112 -37 9 973 405 212 48 121 chrX 50917708 50917874 -115732422 + B4A SINE B4 2 155 -137 9 973 276 186 0 0 chrX 50918008 50918067 -115732229 + (CA)n Simple_repeat Simple_repeat 2 60 0 9 973 376 161 28 42 chrX 50918074 50918217 -115732079 + (CAGAGA)n Simple_repeat Simple_repeat 2 142 0 9 973 213 260 27 27 chrX 50918321 50918396 -115731900 + B1_Mur3 SINE Alu 61 135 -14 9 973 685 206 0 0 chrX 50918428 50918559 -115731737 + B1_Mur2 SINE Alu 18 148 -1 9 973 953 253 90 125 chrX 50919134 50919531 -115730765 + MT2A LTR ERVL 1 372 -161 9 973 823 170 0 7 chrX 50919531 50919679 -115730617 - B1_Mur4 SINE Alu -1 149 3 9 973 953 253 90 125 chrX 50919679 50919760 -115730536 + MT2A LTR ERVL 373 461 -72 9 973 219 207 35 0 chrX 50919817 50919875 -115730421 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 9 973 442 324 0 7 chrX 50919974 50920120 -115730176 - B1F SINE Alu 0 149 5 9 973 451 230 15 124 chrX 50920425 50920698 -115729598 - Lx9 LINE L1 0 7644 7402 9 973 1037 250 60 176 chrX 50920715 50921619 -115728677 + RLTR40 LTR ERVK 3 801 -16 9 973 1923 223 42 9 chrX 50921633 50922001 -115728295 - Lx9 LINE L1 -251 7393 7016 9 973 243 0 0 0 chrX 50922001 50922028 -115728268 + (TC)n Simple_repeat Simple_repeat 2 28 0 9 973 1923 223 42 9 chrX 50922028 50922116 -115728180 - Lx9 LINE L1 -629 7015 6922 9 973 648 234 58 7 chrX 50922125 50922280 -115728016 + B3 SINE B2 52 214 -2 9 973 2538 83 25 0 chrX 50922321 50922681 -115727615 + MusHAL1 LINE L1 1330 1698 -1014 9 973 6633 131 2 2 chrX 50922683 50923672 -115726624 + Lx2 LINE L1 5654 6642 -355 9 973 1251 113 50 23 chrX 50923672 50923890 -115726406 + Lx2 LINE L1 6774 6997 0 9 973 348 263 48 39 chrX 50924265 50924368 -115725928 - B1F SINE Alu -33 116 13 9 973 460 249 12 0 chrX 50924691 50924856 -115725440 + (TA)n Simple_repeat Simple_repeat 2 168 0 9 973 2256 119 20 11 chrX 50924857 50925213 -115725083 + RLTR15 LTR ERVK 1 359 0 9 973 297 0 0 0 chrX 50925306 50925339 -115724957 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 973 1011 32 0 0 chrX 50925340 50925463 -115724833 + (GAA)n Simple_repeat Simple_repeat 2 124 0 9 973 813 164 316 12 chrX 50925988 50926235 -115724061 + MYSERV6-int LTR ERVK 6406 6727 -2232 9 973 463 202 64 85 chrX 50926228 50926369 -115723927 + RLTR18-int LTR ERVK 4720 4857 -504 9 973 433 274 7 59 chrX 50927310 50927446 -115722850 + B1_Mur3 SINE Alu 15 143 -6 9 973 1434 238 27 47 chrX 50927615 50928065 -115722231 + MYSERV-int LTR ERVK 4278 4718 -1832 9 973 199 82 0 75 chrX 50928102 50928155 -115722141 + T-rich Low_complexity Low_complexity 6 54 0 9 973 330 76 2 71 chrX 50928155 50928219 -115722077 - B1_Mm SINE Alu 0 149 89 9 973 3529 265 80 68 chrX 50928362 50928880 -115721416 + MYSERV6-int LTR ERVK 524 1057 -1269 9 973 1307 83 33 6 chrX 50928880 50929062 -115721234 + B2_Mm2 SINE B2 4 190 -5 9 973 3949 221 61 51 chrX 50929062 50929569 -115720727 + MYSERV6-int LTR ERVK 7813 8193 -766 9 973 1123 69 7 0 chrX 50929569 50929713 -115720583 + B1_Mus1 SINE Alu 4 148 0 9 973 441 0 0 0 chrX 50929715 50929764 -115720532 + (CAAAA)n Simple_repeat Simple_repeat 5 53 0 9 973 3949 206 55 45 chrX 50929764 50930515 -115719781 + MYSERV6-int LTR ERVK 8194 8958 -1 9 973 1770 142 32 21 chrX 50930516 50930854 -115719442 + RLTR15 LTR ERVK 1 342 -17 9 973 261 246 0 16 chrX 50930857 50930919 -115719377 + (CATA)n Simple_repeat Simple_repeat 3 63 0 9 973 298 273 49 29 chrX 50930936 50931038 -115719258 - LTR53 LTR ERVL 0 519 416 9 973 995 139 6 28 chrX 50931082 50931260 -115719036 + URR1B DNA MER1_type 52 225 0 9 973 209 316 38 0 chrX 50931471 50931550 -115718746 - L2 LINE L2 -577 2842 2761 9 973 243 59 0 0 chrX 50932077 50932111 -115718185 + MTB LTR MaLR 373 406 -1 9 973 7594 90 2 63 chrX 50932111 50933279 -115717017 + MTB-int LTR MaLR 1 1096 -2 9 973 3017 66 13 5 chrX 50933281 50933678 -115716618 + MTB LTR MaLR 1 400 0 9 973 26 30 0 0 chrX 50934085 50934118 -115716178 + AT_rich Low_complexity Low_complexity 1 33 0 9 973 237 33 0 0 chrX 50934118 50934148 -115716148 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 9 973 587 237 61 0 chrX 50934159 50934290 -115716006 - RSINE1 SINE B4 -25 140 2 9 973 230 234 29 72 chrX 50934356 50934416 -115715880 - BC1_Mm scRNA scRNA -69 83 27 9 973 4387 114 7 229 chrX 50934416 50934827 -115715469 - RLTR21 LTR ERVK 0 1572 1303 9 973 5527 62 54 3 chrX 50934827 50935544 -115714752 + L1Md_F2 LINE L1 5829 6582 0 9 973 4387 114 7 229 chrX 50935544 50935648 -115714648 - RLTR21 LTR ERVK -270 1302 1289 9 973 234 62 0 0 chrX 50935648 50935680 -115714616 + (CA)n Simple_repeat Simple_repeat 2 33 0 9 973 4387 114 7 229 chrX 50935680 50936462 -115713834 - RLTR21 LTR ERVK -284 1288 563 9 973 216 60 39 39 chrX 50937149 50937201 -115713095 + (TTG)n Simple_repeat Simple_repeat 2 53 0 9 973 1072 78 14 0 chrX 50937308 50937449 -115712847 + B1_Mus2 SINE Alu 1 143 -4 9 973 641 213 66 7 chrX 50937481 50937618 -115712678 + B1_Mus2 SINE Alu 3 147 0 9 973 26 30 0 0 chrX 50937618 50937651 -115712645 + AT_rich Low_complexity Low_complexity 1 33 0 9 973 26 74 0 0 chrX 50937745 50937799 -115712497 + AT_rich Low_complexity Low_complexity 1 54 0 9 973 1957 215 88 46 chrX 50937966 50938513 -115711783 - Lx7 LINE L1 0 7696 7127 9 973 29 60 0 0 chrX 50938592 50938642 -115711654 + AT_rich Low_complexity Low_complexity 1 50 0 9 973 348 370 17 0 chrX 50938798 50938917 -115711379 + RSINE1 SINE B4 4 124 -41 9 973 264 264 95 99 chrX 50940028 50940091 -115710205 - L1MA5 LINE L1 -279 6021 5956 9 973 366 23 0 0 chrX 50940091 50940134 -115710162 + (CA)n Simple_repeat Simple_repeat 1 43 0 9 973 264 264 95 99 chrX 50940134 50940343 -115709953 - L1MA5 LINE L1 -345 5955 5751 9 973 3524 126 41 2 chrX 50940935 50941490 -115708806 - RLTR21 LTR ERVK -995 577 1 9 973 180 111 0 0 chrX 50941578 50941605 -115708691 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 973 215 245 0 0 chrX 50941642 50941691 -115708605 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 9 973 430 303 144 11 chrX 50941696 50941883 -115708413 - B4A SINE B4 -80 212 1 9 973 253 0 54 0 chrX 50941977 50942014 -115708282 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 9 973 23 54 0 0 chrX 50942484 50942521 -115707775 + AT_rich Low_complexity Low_complexity 1 37 0 9 973 314 225 42 0 chrX 50942555 50942626 -115707670 + B1_Mur4 SINE Alu 14 87 -63 9 973 238 264 0 19 chrX 50942624 50942678 -115707618 + ID4_ SINE ID 29 81 -2 9 973 330 278 83 0 chrX 50942814 50942922 -115707374 + PB1 SINE Alu 11 127 0 9 973 384 22 0 0 chrX 50942971 50943016 -115707280 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 973 781 191 0 0 chrX 50943269 50943410 -115706886 + B1_Mus1 SINE Alu 8 148 0 9 973 318 236 19 14 chrX 50943424 50943513 -115706783 + B1_Mur2 SINE Alu 1 94 -55 9 973 1344 112 68 0 chrX 50943515 50943720 -115706576 - URR1A DNA MER1_type 0 226 8 9 973 1390 224 85 40 chrX 50943927 50944281 -115706015 + ORR1D1 LTR MaLR 1 370 -4 9 973 297 0 0 0 chrX 50944281 50944314 -115705982 + (CA)n Simple_repeat Simple_repeat 2 34 0 9 973 973 188 68 19 chrX 50944352 50944558 -115705738 - B3 SINE B2 0 216 1 9 973 438 302 35 55 chrX 50944858 50945058 -115705238 - Lx7 LINE L1 -412 7284 7089 9 973 423 262 18 27 chrX 50947141 50947251 -115703045 + PB1D7 SINE Alu 12 120 0 9 973 323 276 48 0 chrX 50947706 50947811 -115702485 - PB1D10 SINE Alu -7 110 1 9 973 258 214 96 41 chrX 50947882 50947955 -115702341 - MLT1E3 LTR MaLR -190 434 358 9 973 27 29 0 0 chrX 50948434 50948468 -115701828 + AT_rich Low_complexity Low_complexity 1 34 0 9 973 384 322 179 12 chrX 50948485 50948658 -115701638 + ID_B1 SINE B4 11 212 -12 9 973 866 155 56 0 chrX 50949841 50949983 -115700313 - B1_Mur4 SINE Alu 0 150 1 9 973 633 302 116 0 chrX 50950084 50950299 -115699997 - MTD LTR MaLR -55 364 125 9 973 8302 53 1 1 chrX 50950302 50951433 -115698863 - L1Md_F2 LINE L1 0 6582 5452 9 973 238 221 24 61 chrX 50952108 50952190 -115698106 - LTR16A LTR ERVL -369 82 4 9 973 399 161 0 54 chrX 50952218 50952310 -115697986 + Lx3A LINE L1 6891 6977 -4 9 973 556 298 0 0 chrX 50952358 50952482 -115697814 + B1F SINE Alu 3 126 -23 9 973 477 0 0 0 chrX 50952620 50952673 -115697623 + (CA)n Simple_repeat Simple_repeat 2 54 0 9 973 511 127 0 0 chrX 50952788 50952859 -115697437 + RLTR20A LTR ERVK 3 73 -468 9 973 1342 160 5 5 chrX 50952858 50953071 -115697225 + RLTR20A LTR ERVK 329 541 0 9 973 387 288 107 30 chrX 50953110 50953278 -115697018 + B3A SINE B2 4 184 -14 9 973 556 188 160 29 chrX 50953292 50953467 -115696829 - B3A SINE B2 0 198 1 9 973 344 239 14 0 chrX 50953534 50953605 -115696691 - ID4 SINE ID -10 73 2 9 973 436 253 23 11 chrX 50953661 50953749 -115696547 - RSINE1 SINE B4 -19 146 58 9 973 21 0 0 0 chrX 50953849 50953870 -115696426 + AT_rich Low_complexity Low_complexity 1 21 0 9 973 777 199 7 7 chrX 50953885 50954027 -115696269 - B1F SINE Alu -7 142 1 9 973 359 361 102 19 chrX 50954221 50954486 -115695810 + Kanga1d DNA Tc2 36 322 -287 9 973 506 305 79 84 chrX 50954530 50954745 -115695551 + B3A SINE B2 1 214 -2 9 973 378 287 80 30 chrX 50954745 50954946 -115695350 + B3 SINE B2 1 211 -5 1 973 1435 209 109 12 chrX 50955174 50955503 -115694793 - ORR1D2 LTR MaLR -4 366 6 1 973 2567 202 44 21 chrX 50955920 50956487 -115693809 + Lx9 LINE L1 6814 7393 -251 1 973 986 232 52 35 chrX 50956501 50956733 -115693563 - RLTR40 LTR ERVK -16 801 566 1 973 751 160 15 22 chrX 50956814 50956948 -115693348 - B1_Mur2 SINE Alu -2 147 15 1 973 1114 210 240 27 chrX 50956954 50957407 -115692889 - RLTR40 LTR ERVK -266 551 3 1 973 447 177 18 9 chrX 50957424 50957538 -115692758 + Lx9 LINE L1 7402 7516 -128 1 973 416 331 0 7 chrX 50958006 50958152 -115692144 + B1F SINE Alu 5 149 0 1 973 1111 248 117 113 chrX 50958367 50958448 -115691848 - MT2A LTR ERVL -71 462 380 1 973 807 170 0 20 chrX 50958448 50958585 -115691711 + B1_Mur4 SINE Alu 3 137 -13 1 973 213 39 0 0 chrX 50958585 50958611 -115691685 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 973 807 170 0 20 chrX 50958611 50958623 -115691673 + B1_Mur4 SINE Alu 138 149 -1 1 973 1111 248 117 113 chrX 50958623 50959001 -115691295 - MT2A LTR ERVL -154 379 1 1 973 230 382 0 0 chrX 50959024 50959113 -115691183 - PB1D10 SINE Alu -28 89 1 1 973 220 364 126 9 chrX 50959150 50959261 -115691035 + PB1 SINE Alu 4 127 0 1 973 725 214 0 0 chrX 50959579 50959710 -115690586 - B1_Mur2 SINE Alu -1 148 18 1 973 235 232 0 115 chrX 50959642 50959720 -115690576 - MT2B LTR ERVL -361 240 172 1 973 240 264 24 34 chrX 50959742 50959834 -115690462 - B1_Mur3 SINE Alu -14 135 20 1 973 397 153 28 42 chrX 50959921 50960064 -115690232 + (TCTCTG)n Simple_repeat Simple_repeat 2 142 0 1 973 276 186 0 0 chrX 50960071 50960130 -115690166 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 973 438 244 45 114 chrX 50960203 50960430 -115689866 - B4A SINE B4 -78 214 2 1 973 368 157 25 150 chrX 50960430 50960545 -115689751 - B1F1 SINE Alu -37 112 13 1 973 351 239 15 15 chrX 50960635 50960771 -115689525 + (CATATA)n Simple_repeat Simple_repeat 3 138 0 1 973 395 297 75 38 chrX 50960943 50961076 -115689220 + B1_Mur2 SINE Alu 8 145 -4 1 973 2251 115 6 0 chrX 50961084 50961407 -115688889 - ORR1A2 LTR MaLR -2 325 1 1 973 207 0 0 0 chrX 50961631 50961654 -115688642 + (T)n Simple_repeat Simple_repeat 1 23 0 1 973 38506 31 0 0 chrX 50961675 50968149 -115682147 - L1Md_T LINE L1 0 6585 43 1 973 500 273 23 15 chrX 50968177 50968307 -115681989 + RSINE1 SINE B4 4 134 -31 1 973 270 116 0 0 chrX 50968453 50968496 -115681800 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 973 528 271 21 7 chrX 50968504 50968649 -115681647 - RSINE1 SINE B4 -14 151 5 1 973 230 200 31 16 chrX 50969697 50969824 -115680472 + (TCTCTG)n Simple_repeat Simple_repeat 4 132 0 1 973 263 299 167 31 chrX 50970356 50970518 -115679778 + B3 SINE B2 33 216 0 1 973 445 372 22 11 chrX 50970590 50970775 -115679521 + B3 SINE B2 6 192 -24 1 973 243 0 0 0 chrX 50973890 50973917 -115676379 + (T)n Simple_repeat Simple_repeat 1 27 0 1 973 334 299 92 47 chrX 50975044 50975331 -115674965 + MLT1B LTR MaLR 88 390 0 1 973 218 315 46 9 chrX 50975390 50975499 -115674797 + B1F SINE Alu 23 135 -14 1 973 512 191 0 62 chrX 50975739 50975851 -115674445 + B1_Mus2 SINE Alu 41 145 -2 1 973 673 126 14 0 chrX 50975862 50976005 -115674291 + (GA)n Simple_repeat Simple_repeat 2 146 0 1 973 529 268 14 0 chrX 50976016 50976154 -115674142 + B1_Mus1 SINE Alu 1 140 -8 1 973 521 55 0 14 chrX 50976408 50976482 -115673814 + (TATG)n Simple_repeat Simple_repeat 2 74 0 1 973 297 338 36 36 chrX 50976672 50976810 -115673486 + B4 SINE B4 9 146 -146 1 973 25 95 0 0 chrX 50977221 50977295 -115673001 + AT_rich Low_complexity Low_complexity 1 74 0 1 973 534 16 0 0 chrX 50977387 50977450 -115672846 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 973 368 335 34 46 chrX 50977668 50977843 -115672453 + RLTR41 LTR ERV1 239 411 -35 1 973 308 233 15 2 chrX 50978287 50978376 -115671920 + B1_Mur3 SINE Alu 24 113 -7 1 973 1675 84 4 70 chrX 50978643 50978913 -115671383 + L1Md_F2 LINE L1 6327 6578 -4 1 973 255 238 0 48 chrX 50980500 50980584 -115669712 + L1MD LINE L1 5413 5492 -867 1 973 379 357 65 7 chrX 50980686 50980841 -115669455 + ID_B1 SINE B4 2 165 -59 1 973 2628 171 75 7 chrX 50980841 50980874 -115669422 - RMER15 LTR ERVL -1 574 542 1 973 693 73 0 0 chrX 50980874 50980970 -115669326 + (CA)n Simple_repeat Simple_repeat 2 97 0 1 973 2628 171 75 7 chrX 50980970 50981353 -115668943 - RMER15 LTR ERVL -34 541 134 1 973 195 42 0 0 chrX 50981353 50981377 -115668919 + (G)n Simple_repeat Simple_repeat 1 24 0 1 973 2628 171 75 7 chrX 50981377 50981496 -115668800 - RMER15 LTR ERVL -442 133 5 1 973 597 284 87 40 chrX 50982960 50983235 -115667061 + RMER15 LTR ERVL 274 561 -14 1 973 1043 282 44 40 chrX 50983523 50983951 -115666345 + RMER10A LTR ERVL 1 430 -12 1 973 724 249 14 29 chrX 50984119 50984315 -115665981 - B3 SINE B2 -8 187 1 1 973 572 311 20 15 chrX 50984418 50984617 -115665679 - B3 SINE B2 -11 205 6 1 973 269 307 0 43 chrX 50984849 50984941 -115665355 + MLT1C LTR MaLR 66 153 -314 1 973 403 292 20 13 chrX 50984973 50985122 -115665174 + B3A SINE B2 1 150 -48 1 974 479 312 0 0 chrX 50988488 50988629 -115661667 - B1F2 SINE Alu -7 142 2 1 974 369 0 0 0 chrX 50990040 50990081 -115660215 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 974 218 364 75 52 chrX 50990665 50990839 -115659457 - ID_B1 SINE B4 -31 193 16 1 974 236 216 0 38 chrX 50992245 50992298 -115657998 + B3A SINE B2 20 70 -128 1 974 315 0 0 0 chrX 50992299 50992334 -115657962 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 974 324 301 7 22 chrX 50992386 50992525 -115657771 + GA-rich Low_complexity Low_complexity 2 138 0 1 974 218 231 20 27 chrX 50992548 50992695 -115657601 + GA-rich Low_complexity Low_complexity 1 146 0 1 974 222 155 67 33 chrX 50992707 50992767 -115657529 + GA-rich Low_complexity Low_complexity 5 66 0 1 974 207 100 0 0 chrX 50995249 50995279 -115655017 + (CCCTG)n Simple_repeat Simple_repeat 3 32 0 1 974 189 0 0 0 chrX 50996987 50997008 -115653288 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 974 1145 69 7 0 chrX 50997008 50997153 -115653143 - B1_Mm SINE Alu 0 147 2 1 974 275 257 14 14 chrX 50997890 50997961 -115652335 - B3A SINE B2 -127 71 1 1 974 243 125 0 0 chrX 50998131 50998171 -115652125 + (CCA)n Simple_repeat Simple_repeat 2 41 0 1 974 206 118 0 0 chrX 51000046 51000080 -115650216 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 1 974 486 327 9 9 chrX 51000080 51000296 -115650000 - B3 SINE B2 0 216 1 2 974 383 303 31 41 chrX 51003279 51003475 -115646821 - B3 SINE B2 -22 194 1 3 974 876 223 20 10 chrX 51004198 51004402 -115645894 - B3 SINE B2 -10 206 1 4 974 440 338 0 0 chrX 51006463 51006620 -115643676 - B3 SINE B2 -56 160 4 5 974 786 50 0 0 chrX 51006716 51006815 -115643481 + (TTCC)n Simple_repeat Simple_repeat 3 101 0 6 974 1125 95 0 0 chrX 51006831 51006979 -115643317 - B1_Mus1 SINE Alu 0 148 1 7 974 534 70 0 0 chrX 51008289 51008360 -115641936 + (TC)n Simple_repeat Simple_repeat 1 71 0 8 974 1266 14 0 0 chrX 51008361 51008502 -115641794 - B1_Mm SINE Alu -6 141 1 9 974 431 321 11 11 chrX 51009238 51009427 -115640869 - B3 SINE B2 -27 189 1 1 974 212 211 19 0 chrX 51011068 51011120 -115639176 + (TTA)n Simple_repeat Simple_repeat 3 55 0 1 974 663 212 22 7 chrX 51011122 51011260 -115639036 - B1_Mur4 SINE Alu 0 150 11 1 974 279 0 0 0 chrX 51011579 51011610 -115638686 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 974 1141 69 0 0 chrX 51011610 51011746 -115638550 - B1_Mus1 SINE Alu -7 141 6 1 974 222 284 0 29 chrX 51015867 51015936 -115634360 + C-rich Low_complexity Low_complexity 1 67 0 1 974 450 0 0 0 chrX 51016703 51016753 -115633543 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 974 1016 88 7 13 chrX 51020890 51021039 -115629257 + B1_Mus1 SINE Alu 1 148 0 1 974 728 113 0 0 chrX 51021652 51021758 -115628538 + B2_Mm2 SINE B2 2 107 -88 1 974 698 178 49 49 chrX 51022140 51022282 -115628014 - B1_Mur3 SINE Alu -5 144 3 1 974 243 314 23 0 chrX 51022362 51022448 -115627848 - B3 SINE B2 -128 88 1 2 974 339 258 133 32 chrX 51022694 51022811 -115627485 + L1MDa LINE L1 2391 2526 -4107 2 974 634 217 0 8 chrX 51022811 51022941 -115627355 - B1_Mur1 SINE Alu -16 133 5 2 974 339 258 133 32 chrX 51022941 51023011 -115627285 + L1MDa LINE L1 2527 2597 -4036 2 974 22 0 0 0 chrX 51023023 51023045 -115627251 + AT_rich Low_complexity Low_complexity 1 22 0 2 974 474 149 2 12 chrX 51023099 51023196 -115627100 + L1_Mur2 LINE L1 5689 5822 -469 2 974 1653 202 41 9 chrX 51023196 51023515 -115626781 + Lx5 LINE L1 6722 7050 0 2 974 395 206 84 47 chrX 51024221 51024328 -115625968 + PB1D9 SINE Alu 5 115 -5 2 974 186 43 0 0 chrX 51024332 51024355 -115625941 + (TAAAAA)n Simple_repeat Simple_repeat 4 26 0 2 974 332 327 44 35 chrX 51024464 51024578 -115625718 + RSINE1 SINE B4 39 153 -12 2 974 513 71 0 0 chrX 51024591 51024661 -115625635 + (TAAA)n Simple_repeat Simple_repeat 1 70 0 2 974 547 258 15 28 chrX 51024988 51025146 -115625150 - RSINE1 SINE B4 -8 157 1 3 974 908 99 74 12 chrX 51025556 51025719 -115624577 + ORR1C1 LTR MaLR 206 378 0 3 974 629 145 17 0 chrX 51025819 51025936 -115624360 + A-rich Low_complexity Low_complexity 3 121 0 3 974 218 344 16 0 chrX 51026045 51026106 -115624190 - AluF_3 SINE Alu -111 200 139 3 974 475 293 28 117 chrX 51026159 51026449 -115623847 - L1M4 LINE L1 -488 5686 5423 3 974 938 112 7 0 chrX 51026491 51026634 -115623662 - B1_Mus1 SINE Alu 0 148 5 3 974 482 184 0 107 chrX 51026525 51026665 -115623631 - MT2B LTR ERVL -337 264 140 3 974 885 145 0 0 chrX 51026735 51026873 -115623423 + B1_Mus1 SINE Alu 1 138 -10 3 974 255 208 0 36 chrX 51027582 51027637 -115622659 + B4A SINE B4 90 142 -150 3 974 494 238 38 0 chrX 51027591 51027696 -115622600 + PB1D7 SINE Alu 12 120 0 3 974 414 0 0 0 chrX 51027696 51027742 -115622554 + (A)n Simple_repeat Simple_repeat 1 46 0 4 974 255 278 20 147 chrX 51028484 51028641 -115621655 + B3 SINE B2 45 202 -14 4 974 833 256 93 15 chrX 51028791 51029061 -115621235 + Lx8 LINE L1 7181 7471 -2 4 974 269 258 135 0 chrX 51029361 51029450 -115620846 - RSINE1 SINE B4 -62 103 3 4 974 729 144 0 0 chrX 51030184 51030344 -115619952 + (GA)n Simple_repeat Simple_repeat 2 161 0 4 974 24 0 0 0 chrX 51030500 51030524 -115619772 + AT_rich Low_complexity Low_complexity 1 24 0 4 974 26 30 0 0 chrX 51031028 51031061 -115619235 + AT_rich Low_complexity Low_complexity 1 33 0 4 974 230 333 27 18 chrX 51031186 51031296 -115619000 - L1M5 LINE L1 -565 5559 5449 4 974 828 197 0 0 chrX 51031299 51031441 -115618855 + B1_Mur4 SINE Alu 1 142 -8 4 974 435 38 0 0 chrX 51031460 51031513 -115618783 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 974 459 0 0 0 chrX 51031513 51031563 -115618733 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 974 667 286 117 8 chrX 51032044 51032291 -115618005 + B4A SINE B4 1 274 -18 5 974 410 310 87 5 chrX 51032449 51032634 -115617662 - RMER15 LTR ERVL -42 533 334 5 974 651 147 0 0 chrX 51032677 51032786 -115617510 + B1_Mur3 SINE Alu 33 141 -8 5 974 342 0 0 0 chrX 51032786 51032824 -115617472 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 5 974 206 178 22 0 chrX 51032919 51032964 -115617332 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 5 974 2260 57 4 4 chrX 51034461 51034742 -115615554 - L1_Mus1 LINE L1 -4 6563 6283 5 974 313 340 71 27 chrX 51034784 51034896 -115615400 - 5S rRNA rRNA 0 121 5 5 974 210 250 0 0 chrX 51035065 51035105 -115615191 + (TTG)n Simple_repeat Simple_repeat 1 40 0 5 974 708 210 19 138 chrX 51035125 51035285 -115615011 + B3 SINE B2 1 143 -73 5 974 273 297 76 43 chrX 51035523 51035734 -115614562 + RMER15 LTR ERVL 356 573 -2 6 974 200 184 0 0 chrX 51036022 51036060 -115614236 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 974 1142 69 7 0 chrX 51036301 51036446 -115613850 - B1_Mus1 SINE Alu -1 147 2 6 974 335 242 74 0 chrX 51036536 51036631 -115613665 + L1MC2 LINE L1 6097 6198 -146 6 974 204 163 0 23 chrX 51036810 51036854 -115613442 + T-rich Low_complexity Low_complexity 3 45 0 6 974 236 293 36 24 chrX 51038002 51038086 -115612210 - PB1 SINE Alu -7 120 36 6 974 391 250 136 55 chrX 51038949 51039148 -115611148 - B3 SINE B2 0 216 2 6 974 2165 198 43 62 chrX 51039693 51040225 -115610071 + Lx5 LINE L1 6527 7048 -2 6 974 248 0 31 0 chrX 51041247 51041279 -115609017 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 6 974 3879 83 101 19 chrX 51041834 51042420 -115607876 - L1_Mus3 LINE L1 0 6638 6005 6 974 531 0 0 0 chrX 51043893 51043952 -115606344 + (CTA)n Simple_repeat Simple_repeat 3 61 0 7 974 615 194 18 8 chrX 51044373 51044520 -115605776 - B1_Mus2 SINE Alu 0 150 1 7 974 1871 258 33 35 chrX 51044641 51045127 -115605169 - Lx5 LINE L1 -3 7047 6563 7 974 378 38 19 0 chrX 51045162 51045215 -115605081 + B1_Mus1 SINE Alu 1 54 -94 7 974 756 167 14 14 chrX 51045265 51045405 -115604891 - B1_Mur2 SINE Alu -8 141 2 7 974 744 206 14 0 chrX 51045552 51045698 -115604598 + B1_Mur1 SINE Alu 2 149 0 7 974 355 119 30 0 chrX 51046376 51046443 -115603853 + (GGGAGA)n Simple_repeat Simple_repeat 3 71 0 7 974 22 0 0 0 chrX 51047980 51048002 -115602294 + AT_rich Low_complexity Low_complexity 1 22 0 7 974 663 200 32 0 chrX 51048376 51048501 -115601795 + B3 SINE B2 1 129 -87 7 974 4607 38 0 23 chrX 51049050 51049613 -115600683 - L1_Mus1 LINE L1 0 6567 6018 7 974 207 0 0 0 chrX 51049653 51049676 -115600620 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 974 1093 92 0 0 chrX 51049679 51049821 -115600475 - B1_Mm SINE Alu -5 142 1 8 974 21 36 0 0 chrX 51051494 51051522 -115598774 + AT_rich Low_complexity Low_complexity 1 28 0 8 974 517 163 13 180 chrX 51051610 51051760 -115598536 + B1_Mur4 SINE Alu 26 150 0 8 974 305 281 0 0 chrX 51051981 51052063 -115598233 + B1_Mur1 SINE Alu 68 149 0 8 974 758 282 20 5 chrX 51052287 51052490 -115597806 - B3 SINE B2 -10 206 1 8 974 1800 38 0 0 chrX 51053260 51053471 -115596825 - L1Md_A LINE L1 -499 6083 5873 8 974 4221 46 0 0 chrX 51053471 51053967 -115596329 + L1Md_T LINE L1 6086 6581 -1 8 974 240 328 0 0 chrX 51053983 51054047 -115596249 + ID4 SINE ID 12 75 -8 8 974 782 197 21 21 chrX 51054333 51054478 -115595818 + B1_Mur3 SINE Alu 1 145 -4 8 974 22 56 0 0 chrX 51055102 51055138 -115595158 + AT_rich Low_complexity Low_complexity 1 36 0 9 974 217 329 0 0 chrX 51056163 51056239 -115594057 + CT-rich Low_complexity Low_complexity 1 76 0 9 974 393 95 0 0 chrX 51059009 51059072 -115591224 + (T)n Simple_repeat Simple_repeat 1 63 0 9 974 1071 22 7 0 chrX 51059072 51059210 -115591086 - B1_Mus1 SINE Alu 0 148 10 9 974 640 295 42 42 chrX 51061419 51061610 -115588686 + B3A SINE B2 1 191 -7 9 974 555 160 192 8 chrX 51061633 51061753 -115588543 + B1_Mus1 SINE Alu 1 142 -6 9 974 25 31 0 0 chrX 51061753 51061785 -115588511 + AT_rich Low_complexity Low_complexity 1 32 0 9 974 321 257 188 0 chrX 51061819 51061920 -115588376 - RSINE1 SINE B4 -35 130 11 9 974 633 90 0 0 chrX 51062256 51062345 -115587951 + B1_Mus1 SINE Alu 1 89 -59 9 974 608 203 0 39 chrX 51063050 51063178 -115587118 - B3 SINE B2 -90 126 4 9 974 234 255 20 10 chrX 51063298 51063397 -115586899 - L1M2 LINE L1 -1511 4632 4533 1 974 28 29 0 0 chrX 51064119 51064154 -115586142 + AT_rich Low_complexity Low_complexity 1 35 0 1 974 242 222 46 31 chrX 51064723 51064788 -115585508 - B1F1 SINE Alu -2 147 82 1 974 372 268 0 0 chrX 51064731 51064813 -115585483 - ID_B1 SINE B4 -8 216 135 1 974 449 303 9 0 chrX 51065108 51065217 -115585079 - B1_Mus2 SINE Alu -29 118 9 1 974 736 296 77 48 chrX 51065324 51065703 -115584593 + MLT1A1 LTR MaLR 16 405 -3 1 974 22 0 0 0 chrX 51066560 51066582 -115583714 + AT_rich Low_complexity Low_complexity 1 22 0 1 974 522 222 287 0 chrX 51066625 51066792 -115583504 - B3 SINE B2 0 216 2 1 974 1564 291 40 36 chrX 51066925 51067038 -115583258 - Lx8 LINE L1 -7 7466 7354 1 974 1163 107 6 0 chrX 51067038 51067216 -115583080 + (TTC)n Simple_repeat Simple_repeat 1 179 0 1 974 1564 291 40 36 chrX 51067216 51067603 -115582693 - Lx8 LINE L1 -120 7353 6962 1 974 1629 145 84 229 chrX 51067603 51067881 -115582415 + MTC LTR MaLR 1 210 -211 1 974 285 29 0 0 chrX 51067881 51067915 -115582381 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 974 1629 145 84 229 chrX 51067915 51068126 -115582170 + MTC LTR MaLR 211 419 -2 1 974 1564 291 40 36 chrX 51068126 51068145 -115582151 - Lx8 LINE L1 -512 6961 6944 1 974 631 327 22 22 chrX 51068156 51068434 -115581862 + RMER15-int LTR ERVL 1372 1649 -3350 1 974 590 336 99 20 chrX 51068880 51069223 -115581073 + RMER15-int LTR ERVL 2026 2395 -2604 1 974 248 335 68 37 chrX 51069349 51069510 -115580786 - L2a LINE L2 -271 3155 2990 1 974 4773 67 10 11 chrX 51069941 51070634 -115579662 - MusHAL1 LINE L1 -1897 815 124 1 974 555 321 6 6 chrX 51071687 51071847 -115578449 + RSINE1 SINE B4 6 165 0 1 974 2177 145 28 58 chrX 51072216 51072612 -115577684 + ORR1C2 LTR MaLR 1 384 0 1 974 4778 214 77 20 chrX 51072612 51073802 -115576494 + ORR1C2-int LTR MaLR 1 1258 -112 1 974 22 56 0 0 chrX 51073970 51074006 -115576290 + AT_rich Low_complexity Low_complexity 1 36 0 1 974 1294 167 14 0 chrX 51074101 51074316 -115575980 + Lx4A LINE L1 6839 7056 -2 1 974 532 242 100 1 chrX 51074322 51074480 -115575816 + ORR1C2-int LTR MaLR 1212 1370 0 1 974 458 250 0 0 chrX 51074659 51074747 -115575549 + B1_Mur1 SINE Alu 47 134 -15 1 974 650 286 11 0 chrX 51074815 51074990 -115575306 - B3 SINE B2 -8 208 32 1 974 1238 54 0 0 chrX 51075014 51075162 -115575134 - B1_Mus1 SINE Alu 0 148 1 1 974 241 175 0 0 chrX 51075162 51075202 -115575094 - B3 SINE B2 -175 41 2 1 974 423 0 0 0 chrX 51075519 51075566 -115574730 + (TTA)n Simple_repeat Simple_repeat 1 47 0 1 974 208 378 0 0 chrX 51078178 51078334 -115571962 + (CAG)n Simple_repeat Simple_repeat 3 158 0 1 974 558 153 37 30 chrX 51080081 51080216 -115570080 - Lx2B LINE L1 -6 6994 6859 1 974 416 292 101 27 chrX 51080340 51080488 -115569808 + RSINE1 SINE B4 7 165 0 1 974 367 312 18 35 chrX 51080536 51080649 -115569647 + RSINE1 SINE B4 9 119 -46 1 974 279 0 0 0 chrX 51080700 51080731 -115569565 + (TAAAA)n Simple_repeat Simple_repeat 3 33 0 1 974 607 258 19 38 chrX 51080781 51080938 -115569358 + RSINE1 SINE B4 10 163 -2 1 974 248 309 62 18 chrX 51081026 51081138 -115569158 + RSINE1 SINE B4 1 117 -48 1 974 2470 138 9 47 chrX 51081234 51081699 -115568597 - RMER15 LTR ERVL -82 493 47 1 974 468 146 11 11 chrX 51081699 51081789 -115568507 - RMER15 LTR ERVL -485 90 1 1 974 661 176 58 22 chrX 51082451 51082590 -115567706 - B1_Mur1 SINE Alu 0 149 6 1 974 192 77 0 0 chrX 51083664 51083690 -115566606 + (T)n Simple_repeat Simple_repeat 1 26 0 1 974 244 286 66 25 chrX 51083702 51083824 -115566472 - RMER15 LTR ERVL -149 426 300 1 974 424 142 89 67 chrX 51083981 51084159 -115566137 + RMER4B LTR ERVK 17 247 -338 1 974 524 298 28 6 chrX 51084415 51084594 -115565702 + B4A SINE B4 72 254 -38 1 974 204 243 13 79 chrX 51085340 51085416 -115564880 + (CAGAGA)n Simple_repeat Simple_repeat 2 72 0 1 974 6075 135 5 10 chrX 51085876 51086848 -115563448 + Lx3B LINE L1 6006 6972 -1 1 974 193 312 67 43 chrX 51088198 51088362 -115561934 + L2 LINE L2 1494 1661 -1758 1 974 460 342 40 0 chrX 51088835 51088987 -115561309 - B4A SINE B4 -4 288 131 1 974 366 127 0 0 chrX 51089086 51089157 -115561139 + (TGG)n Simple_repeat Simple_repeat 1 71 0 1 974 207 0 0 0 chrX 51089154 51089177 -115561119 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 974 237 282 181 99 chrX 51089265 51089497 -115560799 + L2 LINE L2 2049 2299 -1120 1 974 4093 141 16 20 chrX 51089503 51090298 -115559998 + YREP_Mm Unknown Unknown 986 1777 -35 1 974 21 36 0 0 chrX 51091645 51091673 -115558623 + AT_rich Low_complexity Low_complexity 1 28 0 1 974 854 181 0 0 chrX 51091679 51091823 -115558473 + B1_Mur2 SINE Alu 1 144 -5 1 974 1028 204 19 42 chrX 51091856 51092071 -115558225 + B3 SINE B2 4 213 -3 1 974 240 59 0 0 chrX 51092340 51092374 -115557922 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 974 1118 210 0 5 chrX 51092497 51092703 -115557593 + B3 SINE B2 1 205 -11 1 974 418 242 67 0 chrX 51092761 51092881 -115557415 + B1F SINE Alu 21 148 -1 1 974 1063 208 19 5 chrX 51093027 51093235 -115557061 + B3 SINE B2 1 211 -5 1 974 612 296 99 34 chrX 51093475 51093737 -115556559 + B4A SINE B4 11 289 -3 1 974 3639 203 61 56 chrX 51093863 51095141 -115555155 + L1VL2 LINE L1 1 1151 -2464 1 974 12458 177 10 21 chrX 51095127 51097626 -115552670 + L1_Mur1 LINE L1 2285 4757 -1129 1 974 5424 128 21 6 chrX 51097627 51098481 -115551815 + Lx LINE L1 5785 6651 -3 1 974 21 82 0 0 chrX 51098583 51098632 -115551664 + AT_rich Low_complexity Low_complexity 1 49 0 1 974 288 53 0 0 chrX 51099748 51099786 -115550510 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 974 207 188 0 0 chrX 51100056 51100104 -115550192 + A-rich Low_complexity Low_complexity 1 48 0 1 974 763 283 14 24 chrX 51101156 51101366 -115548930 - B3 SINE B2 -7 209 2 1 974 971 130 7 0 chrX 51101652 51101798 -115548498 - B1_Mus1 SINE Alu 0 148 2 1 974 364 236 169 0 chrX 51101798 51101994 -115548302 - B4A SINE B4 -63 229 1 1 974 210 346 0 0 chrX 51102571 51102623 -115547673 + ID4 SINE ID 4 55 -28 1 974 26 0 0 0 chrX 51102636 51102662 -115547634 + AT_rich Low_complexity Low_complexity 1 26 0 1 974 302 327 72 13 chrX 51103212 51103364 -115546932 - B3 SINE B2 -53 163 3 1 974 504 0 0 0 chrX 51103450 51103506 -115546790 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 974 7258 88 4 6 chrX 51103631 51104794 -115545502 - L1Md_F2 LINE L1 0 6582 5424 1 974 3382 77 0 2 chrX 51104793 51105248 -115545048 + L1_Mm LINE L1 3901 4354 -1529 1 974 4912 33 2 3 chrX 51105248 51105829 -115544467 - L1Md_F3 LINE L1 0 6584 6005 1 974 42106 4 1 0 chrX 51105830 51112172 -115538124 - L1Md_A LINE L1 0 6582 237 1 974 33712 74 5 4 chrX 51112173 51117849 -115532447 - L1Md_F3 LINE L1 -564 6020 341 1 121 7475 71 11 0 chrX 51117850 51118891 -115531405 + L1_Mm LINE L1 4345 5396 -487 1 975 251 176 0 0 chrX 51118889 51118940 -115531356 + Lx3B LINE L1 6920 6970 -3 1 975 262 327 55 30 chrX 51120285 51120449 -115529847 + L2 LINE L2 1494 1661 -1758 1 975 195 326 52 10 chrX 51120811 51120907 -115529389 + L2 LINE L2 1926 2025 -1394 1 975 528 355 33 11 chrX 51120922 51121138 -115529158 - B4A SINE B4 -3 289 75 1 975 238 314 43 0 chrX 51121211 51121281 -115529015 - B4A SINE B4 -218 74 2 1 975 323 274 184 111 chrX 51121290 51121524 -115528772 + L2 LINE L2 2049 2299 -1120 1 975 4391 141 15 20 chrX 51121530 51122326 -115527970 + YREP_Mm Unknown Unknown 986 1777 -35 1 975 36 23 0 0 chrX 51122596 51122639 -115527657 + AT_rich Low_complexity Low_complexity 1 43 0 1 975 21 36 0 0 chrX 51123670 51123698 -115526598 + AT_rich Low_complexity Low_complexity 1 28 0 1 975 844 183 0 0 chrX 51123704 51123846 -115526450 + B1_Mur2 SINE Alu 1 142 -7 1 975 1018 204 19 42 chrX 51123882 51124097 -115526199 + B3 SINE B2 4 213 -3 1 975 1096 219 0 5 chrX 51124510 51124716 -115525580 + B3 SINE B2 1 205 -11 1 975 446 256 66 0 chrX 51124774 51124895 -115525401 + B1F SINE Alu 21 149 0 1 975 1075 211 19 0 chrX 51125040 51125249 -115525047 + B3 SINE B2 1 213 -3 1 975 6937 85 2 2 chrX 51125392 51126537 -115523759 - L1Md_F2 LINE L1 -14 6568 5424 1 975 7477 94 6 38 chrX 51126536 51127538 -115522758 + L1_Mm LINE L1 3901 4902 -981 1 975 8150 23 1 3 chrX 51127538 51128469 -115521827 + RLTR13B3 LTR ERVK 1 929 0 1 975 7477 94 6 38 chrX 51128469 51128692 -115521604 + L1_Mm LINE L1 4903 5086 -797 1 975 2571 87 11 8 chrX 51128693 51129064 -115521232 + L1Md_F2 LINE L1 6211 6582 0 1 975 316 326 41 0 chrX 51129776 51129874 -115520422 + B1F1 SINE Alu 1 102 -47 1 975 333 284 0 99 chrX 51130604 51130725 -115519571 - B3 SINE B2 0 216 108 1 975 279 250 0 86 chrX 51130722 51130792 -115519504 - B4A SINE B4 -137 155 92 1 975 378 214 112 35 chrX 51130894 51131010 -115519286 - B3 SINE B2 -65 151 27 1 975 1029 93 7 0 chrX 51131037 51131177 -115519119 - B1_Mus1 SINE Alu -6 142 2 1 975 265 222 0 0 chrX 51131298 51131361 -115518935 + Lx9 LINE L1 7534 7596 -48 1 975 338 316 41 0 chrX 51131726 51131824 -115518472 + B1F1 SINE Alu 1 102 -47 1 975 329 323 20 10 chrX 51132725 51132825 -115517471 - B3 SINE B2 -8 208 108 1 975 422 318 65 13 chrX 51132912 51133065 -115517231 - B3 SINE B2 -53 163 3 1 975 549 42 0 0 chrX 51133148 51133220 -115517076 + (CA)n Simple_repeat Simple_repeat 2 73 0 1 975 212 77 0 25 chrX 51133308 51133348 -115516948 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 975 6673 101 7 3 chrX 51133352 51135004 -115515292 - L1_Mus1 LINE L1 0 6567 4911 1 975 636 169 7 34 chrX 51135389 51135536 -115514760 + Lx LINE L1 6509 6651 -3 1 975 1640 114 0 23 chrX 51135537 51135834 -115514462 + L1_Mus4 LINE L1 6367 6636 0 1 975 1006 118 0 14 chrX 51135884 51136030 -115514266 + B1_Mus2 SINE Alu 3 146 -1 1 975 185 86 57 0 chrX 51136037 51136072 -115514224 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 1 975 239 307 210 11 chrX 51136102 51136283 -115514013 + MLT1D LTR MaLR 24 240 -265 2 975 974 158 0 6 chrX 51136153 51136325 -115513971 + CYRA11_Mm Unknown Y-chromosome 1 171 -446 2 975 888 155 71 28 chrX 51136325 51136537 -115513759 - URR1A DNA MER1_type -1 225 5 2 975 1414 134 0 13 chrX 51136540 51136775 -115513521 + CYRA11_Mm Unknown Y-chromosome 386 617 0 2 975 289 300 80 21 chrX 51136691 51136823 -115513473 + MLT1H1 LTR MaLR 55 236 -313 2 975 2029 210 47 93 chrX 51137092 51137789 -115512507 - Lx7 LINE L1 0 7696 7032 2 975 623 314 0 19 chrX 51137993 51138149 -115512147 + RSINE1 SINE B4 11 163 -2 2 975 25 0 0 0 chrX 51138677 51138702 -115511594 + AT_rich Low_complexity Low_complexity 1 25 0 2 975 31 0 0 0 chrX 51139110 51139141 -115511155 + AT_rich Low_complexity Low_complexity 1 31 0 2 975 540 0 0 0 chrX 51140008 51140068 -115510228 + (TC)n Simple_repeat Simple_repeat 2 61 0 2 975 21 0 0 0 chrX 51140268 51140289 -115510007 + AT_rich Low_complexity Low_complexity 1 21 0 2 975 183 42 0 0 chrX 51140624 51140648 -115509648 + (CTCA)n Simple_repeat Simple_repeat 1 24 0 2 975 599 57 11 0 chrX 51140649 51140737 -115509559 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 2 975 266 216 14 0 chrX 51140758 51140832 -115509464 + (CATATA)n Simple_repeat Simple_repeat 3 77 0 2 975 731 268 55 47 chrX 51140840 51141226 -115509070 - MT2B LTR ERVL -39 562 61 2 975 1224 20 0 0 chrX 51141686 51141833 -115508463 + (CA)n Simple_repeat Simple_repeat 1 147 0 2 975 7459 151 44 14 chrX 51142317 51144038 -115506258 - Lx4B LINE L1 -13 7045 5269 2 975 405 0 0 0 chrX 51144049 51144094 -115506202 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 975 203 156 0 0 chrX 51144094 51144126 -115506170 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 975 234 0 0 0 chrX 51144508 51144534 -115505762 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 975 6550 98 11 6 chrX 51145098 51146451 -115503845 + L1_Mus2 LINE L1 5205 6563 -3 2 975 238 349 66 31 chrX 51150191 51150540 -115499756 + L1_Mur3 LINE L1 453 813 -6899 2 975 4155 175 81 90 chrX 51150897 51152171 -115498125 + Lx7 LINE L1 4240 5501 -379 2 975 1776 254 55 25 chrX 51152174 51152736 -115497560 + Lx7 LINE L1 5879 6457 -1239 2 975 21 0 0 0 chrX 51152956 51152977 -115497319 + AT_rich Low_complexity Low_complexity 1 21 0 2 975 3181 337 73 29 chrX 51153473 51155471 -115494825 - RMER15-int LTR ERVL -2844 2155 70 2 975 417 20 0 0 chrX 51155729 51155779 -115494517 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 975 423 0 0 0 chrX 51156561 51156608 -115493688 + (TAA)n Simple_repeat Simple_repeat 2 48 0 2 975 789 124 178 0 chrX 51156861 51157030 -115493266 + L1_Mur2 LINE L1 4401 4599 -1278 2 975 235 353 48 40 chrX 51157185 51157309 -115492987 + RMER15 LTR ERVL 347 471 -104 2 975 453 66 0 0 chrX 51157412 51157473 -115492823 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 975 282 56 0 0 chrX 51157831 51157867 -115492429 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 975 693 79 0 0 chrX 51157867 51157967 -115492329 + (GA)n Simple_repeat Simple_repeat 2 102 0 2 975 29 28 0 0 chrX 51158166 51158202 -115492094 + AT_rich Low_complexity Low_complexity 1 36 0 2 975 39 38 0 0 chrX 51158433 51158486 -115491810 + AT_rich Low_complexity Low_complexity 1 53 0 2 975 25 0 0 0 chrX 51158798 51158823 -115491473 + AT_rich Low_complexity Low_complexity 1 25 0 2 975 876 69 0 0 chrX 51159590 51159706 -115490590 + (TTTC)n Simple_repeat Simple_repeat 3 118 0 2 975 1054 111 0 0 chrX 51159713 51159857 -115490439 - B1_Mus1 SINE Alu 0 148 5 2 975 6475 83 61 0 chrX 51159954 51161093 -115489203 - L1_Mus1 LINE L1 -1 6566 5380 2 975 6584 38 4 2 chrX 51161093 51161919 -115488377 - IAPEz-int LTR ERVK -2 6479 5653 2 975 2522 79 0 3 chrX 51161914 51162257 -115488039 - IAPEz-int LTR ERVK -4781 1700 1359 2 975 3463 48 0 19 chrX 51162257 51162735 -115487561 - IAPEz-int LTR ERVK -5819 662 211 2 975 5887 144 4 90 chrX 51162735 51164395 -115485901 - L1Md_F LINE L1 -3623 2260 725 2 975 462 294 50 12 chrX 51164441 51164775 -115485521 + L1_Mur3 LINE L1 4562 4912 -1231 2 975 325 317 134 34 chrX 51164977 51165186 -115485110 - Lx8 LINE L1 -94 7379 7150 2 975 3937 201 57 43 chrX 51165186 51166356 -115483940 - Lx8 LINE L1 -1044 6429 5256 2 975 767 76 0 0 chrX 51166352 51166457 -115483839 + L1_Mm LINE L1 2391 2495 -3388 2 975 363 73 0 0 chrX 51166474 51166529 -115483767 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 975 1558 216 33 8 chrX 51166681 51167046 -115483250 + ORR1D1 LTR MaLR 1 374 0 2 975 256 402 78 67 chrX 51167708 51168081 -115482215 - LTR33A_ LTR ERVL -22 509 133 2 975 873 260 26 156 chrX 51168942 51169405 -115480891 + L1VL1 LINE L1 4 395 -6027 2 975 2210 114 5 83 chrX 51169459 51169843 -115480453 + RLTR10D LTR ERVK 1 354 -5 2 975 332 323 16 0 chrX 51169854 51169981 -115480315 + L1Md_F LINE L1 705 833 -5783 2 975 2700 164 0 7 chrX 51169960 51170600 -115479696 + L1Md_F LINE L1 725 1366 -2548 2 975 641 178 42 0 chrX 51170600 51170718 -115479578 + IAPEY3_LTR LTR ERVK 1 123 -209 2 975 1162 144 0 0 chrX 51170718 51170926 -115479370 + L1Md_F LINE L1 1903 2110 -3773 2 975 9009 122 22 6 chrX 51170920 51172343 -115477953 + L1Md_F LINE L1 3717 5163 -720 2 975 381 305 104 57 chrX 51172343 51172642 -115477654 + L1M4 LINE L1 2141 2453 -3693 2 975 957 265 10 7 chrX 51173668 51173890 -115476406 + Lx5 LINE L1 6445 6687 -310 2 975 887 221 48 4 chrX 51174087 51174337 -115475959 - Lx9 LINE L1 -10 7634 7374 2 975 30 27 0 0 chrX 51174338 51174375 -115475921 + AT_rich Low_complexity Low_complexity 1 37 0 2 975 27 49 0 0 chrX 51174818 51174859 -115475437 + AT_rich Low_complexity Low_complexity 1 41 0 2 975 1119 302 18 6 chrX 51174875 51175208 -115475088 + Lx8 LINE L1 6871 7207 -266 2 975 316 222 63 0 chrX 51175242 51175305 -115474991 + Lx8 LINE L1 7162 7228 -245 2 975 427 176 21 7 chrX 51175384 51175480 -115474816 + L1_Mur2 LINE L1 5724 5817 -516 2 975 3837 219 79 6 chrX 51175479 51176301 -115473995 + Lx5 LINE L1 6169 7050 0 2 975 661 281 0 0 chrX 51176437 51176576 -115473720 + B1_Mur2 SINE Alu 3 141 -8 2 975 322 292 38 67 chrX 51176809 51177018 -115473278 - L1M2 LINE L1 -2826 3317 3115 2 975 673 87 278 0 chrX 51177019 51177134 -115473162 - B1_Mus1 SINE Alu 0 148 2 2 975 496 333 28 85 chrX 51177246 51177423 -115472873 - B3A SINE B2 -31 167 1 2 975 355 309 86 35 chrX 51177512 51177710 -115472586 - B3 SINE B2 -5 211 4 2 975 185 0 40 0 chrX 51177736 51177761 -115472535 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 975 4142 180 25 72 chrX 51178105 51179007 -115471289 + RLTR25A LTR ERVK 1 860 -243 2 975 12296 70 0 1 chrX 51179007 51181280 -115469016 - L1Md_F2 LINE L1 -21 6561 4292 2 975 690 184 139 111 chrX 51181280 51181315 -115468981 + RLTR25B LTR ERVK 778 819 -209 2 975 356 97 16 0 chrX 51181315 51181377 -115468919 + (CA)n Simple_repeat Simple_repeat 2 64 0 2 975 690 184 139 111 chrX 51181377 51181585 -115468711 + RLTR25B LTR ERVK 820 1027 -1 2 975 329 343 58 34 chrX 51181585 51181790 -115468506 + L1MC LINE L1 5559 5768 -565 2 975 23 54 0 0 chrX 51181842 51181879 -115468417 + AT_rich Low_complexity Low_complexity 1 37 0 2 975 185 65 32 0 chrX 51182003 51182034 -115468262 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 975 238 169 64 13 chrX 51182262 51182340 -115467956 - Lx9 LINE L1 -22 7622 7541 2 975 1776 315 76 31 chrX 51182337 51182524 -115467772 - Lx9 LINE L1 -422 7222 7012 2 975 516 32 0 0 chrX 51182524 51182586 -115467710 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 975 1776 315 76 31 chrX 51182586 51182611 -115467685 - Lx9 LINE L1 -633 7011 6976 2 975 2761 52 0 36 chrX 51182611 51182969 -115467327 + IAPLTR4 LTR ERVK 1 345 0 2 975 1776 315 76 31 chrX 51182969 51183620 -115466676 - Lx9 LINE L1 -669 6975 6320 2 975 360 64 0 0 chrX 51183623 51183670 -115466626 + (GA)n Simple_repeat Simple_repeat 1 47 0 2 975 1255 323 93 67 chrX 51183872 51184482 -115465814 - Lx8 LINE L1 -186 7287 6660 2 975 3361 52 74 5 chrX 51184482 51184657 -115465639 - MT2C_Mm LTR ERVL 0 475 287 2 975 360 0 0 0 chrX 51184657 51184697 -115465599 + (GA)n Simple_repeat Simple_repeat 1 40 0 2 975 3361 52 74 5 chrX 51184697 51184965 -115465331 - MT2C_Mm LTR ERVL -189 286 2 2 975 1255 323 93 67 chrX 51184965 51185128 -115465168 - Lx8 LINE L1 -814 6659 6494 2 975 2328 70 0 53 chrX 51185128 51185489 -115464807 - MMETn-int LTR ERVK -2774 2070 1729 2 975 597 64 0 0 chrX 51186386 51186464 -115463832 + (CA)n Simple_repeat Simple_repeat 1 78 0 2 975 245 200 57 0 chrX 51187790 51187860 -115462436 + G-rich Low_complexity Low_complexity 4 77 0 2 975 751 198 0 69 chrX 51187868 51188042 -115462254 - MMETn-int LTR ERVK -3103 1741 1580 2 975 7299 88 5 48 chrX 51188056 51189189 -115461107 - MMETn-int LTR ERVK -3538 1306 223 2 975 1183 140 0 101 chrX 51189308 51189555 -115460741 - MMETn-int LTR ERVK -4614 230 9 2 975 1787 129 15 51 chrX 51189561 51189895 -115460401 - RLTRETN_Mm LTR ERVK 0 322 1 2 975 439 234 92 35 chrX 51189959 51190101 -115460195 - RLTR9A LTR ERVK -218 150 1 2 975 299 279 37 27 chrX 51190106 51190248 -115460048 - Lx7 LINE L1 -537 5763 5636 2 975 787 348 64 35 chrX 51190324 51190777 -115459519 - Lx8 LINE L1 0 7473 7008 2 975 888 320 92 60 chrX 51190799 51191450 -115458846 - Lx8 LINE L1 -580 6893 6222 2 975 390 365 0 0 chrX 51191836 51191973 -115458323 + Lx8 LINE L1 6864 7000 -473 2 975 1058 297 69 17 chrX 51191978 51192324 -115457972 + MTE2b LTR MaLR 1 364 -15 2 975 30 27 0 0 chrX 51192411 51192448 -115457848 + AT_rich Low_complexity Low_complexity 1 37 0 2 975 263 347 0 0 chrX 51192459 51192531 -115457765 - ID4 SINE ID -7 76 5 2 975 337 303 56 24 chrX 51192532 51192657 -115457639 - B1F SINE Alu 0 149 21 2 975 335 342 33 33 chrX 51192533 51192684 -115457612 - ID_B1 SINE B4 0 224 74 2 975 234 338 25 0 chrX 51193542 51193622 -115456674 - MIRb SINE MIR -127 141 60 2 975 298 338 64 14 chrX 51193836 51193977 -115456319 - MER5A1 DNA MER1_type -14 152 5 2 975 2017 255 45 4 chrX 51194807 51195295 -115455001 - Lx6 LINE L1 -15 7445 6938 2 975 1339 146 43 39 chrX 51195930 51196187 -115454109 + RMER17B LTR ERVK 1 258 -700 2 975 786 209 10 44 chrX 51196180 51196385 -115453911 + RMER17B LTR ERVK 761 958 0 2 975 390 382 41 25 chrX 51196595 51196839 -115453457 + MER45B DNA Tip100 63 310 -730 2 975 285 39 59 0 chrX 51197176 51197227 -115453069 + (CAA)n Simple_repeat Simple_repeat 2 55 0 2 975 738 287 39 31 chrX 51197338 51197694 -115452602 - L1M2 LINE L1 -1166 4977 4619 2 975 777 307 138 63 chrX 51197695 51198342 -115451954 - Lx9 LINE L1 -4 7640 6946 2 975 574 316 51 58 chrX 51198331 51198741 -115451555 + Lx8 LINE L1 5259 5665 -182 2 975 504 0 0 0 chrX 51198741 51198797 -115451499 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 975 369 380 85 22 chrX 51198805 51199168 -115451128 + Lx8 LINE L1 6189 6574 -899 2 975 570 55 33 0 chrX 51199176 51199267 -115451029 + (TA)n Simple_repeat Simple_repeat 1 94 0 3 975 849 142 0 0 chrX 51199285 51199426 -115450870 + (TA)n Simple_repeat Simple_repeat 2 142 0 3 975 805 317 145 58 chrX 51199492 51199728 -115450568 + Lx8 LINE L1 6779 7024 -449 2 975 5306 65 68 181 chrX 51199728 51200735 -115449561 + RLTR13B1 LTR ERVK 1 893 0 3 975 805 317 145 58 chrX 51200735 51201131 -115449165 + Lx8 LINE L1 7025 7465 -8 2 975 438 344 55 25 chrX 51201690 51201890 -115448406 + MLT1B LTR MaLR 168 373 -17 3 975 23454 26 0 0 chrX 51202615 51206074 -115444222 - L1Md_T LINE L1 0 6582 3123 3 975 360 0 0 0 chrX 51206745 51206785 -115443511 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 975 4405 110 9 0 chrX 51206836 51207480 -115442816 + Lx LINE L1 5990 6639 -15 3 975 252 102 0 0 chrX 51207480 51207529 -115442767 - L1_Mm LINE L1 -3842 2041 1993 3 975 6084 47 0 3 chrX 51207530 51208273 -115442023 + L1Md_F2 LINE L1 5840 6580 -2 3 975 25 0 0 0 chrX 51208399 51208424 -115441872 + AT_rich Low_complexity Low_complexity 1 25 0 3 975 567 67 0 11 chrX 51208788 51208879 -115441417 + L1_Mus2 LINE L1 6476 6565 -1 3 975 34 65 0 0 chrX 51209400 51209462 -115440834 + AT_rich Low_complexity Low_complexity 1 62 0 3 975 226 351 97 7 chrX 51209553 51209708 -115440588 + L2 LINE L2 1885 2053 -1366 3 975 1275 134 14 5 chrX 51209741 51209951 -115440345 - L1_Mus3 LINE L1 -7 6631 6420 3 975 2211 49 0 0 chrX 51209951 51210215 -115440081 + L1_Mus3 LINE L1 6157 6420 -218 3 975 288 0 0 0 chrX 51211192 51211224 -115439072 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 3 975 6248 128 67 22 chrX 51211224 51212263 -115438033 - Lx3_Mus LINE L1 -23 6986 5902 3 975 702 0 0 0 chrX 51212263 51212341 -115437955 + (TTC)n Simple_repeat Simple_repeat 3 80 0 3 975 6248 128 67 22 chrX 51212341 51212404 -115437892 - Lx3_Mus LINE L1 -1108 5901 5835 3 975 889 233 13 60 chrX 51212398 51212815 -115437481 - L1_Mur1 LINE L1 -6664 318 1 3 975 23 0 0 0 chrX 51213493 51213516 -115436780 + AT_rich Low_complexity Low_complexity 1 23 0 3 975 1272 210 45 31 chrX 51213895 51214249 -115436047 - RLTR10D LTR ERVK 0 359 1 3 975 2033 176 11 11 chrX 51214251 51214613 -115435683 - IAP-d-int LTR ERVK -2 6540 6179 3 975 2351 227 10 20 chrX 51214673 51215261 -115435035 - IAP-d-int LTR ERVK -487 6055 5474 3 975 6427 276 14 12 chrX 51215249 51217273 -115433023 - IAP-d-int LTR ERVK -1366 5176 3148 3 975 592 182 14 49 chrX 51217297 51217441 -115432855 - IAP-d-int LTR ERVK -6401 141 3 3 975 1248 203 54 37 chrX 51217443 51217796 -115432500 - RLTR10D LTR ERVK 0 359 1 3 975 471 356 111 33 chrX 51218264 51218335 -115431961 + B4A SINE B4 2 76 -216 3 975 1059 93 23 6 chrX 51218335 51218507 -115431789 + L1_Mus3 LINE L1 6458 6632 -6 3 975 471 356 111 33 chrX 51218507 51218679 -115431617 + B4A SINE B4 77 264 -28 3 975 1044 81 0 0 chrX 51218712 51218873 -115431423 + (TC)n Simple_repeat Simple_repeat 1 161 0 3 975 4350 83 11 0 chrX 51219543 51220236 -115430060 - L1Md_F2 LINE L1 -1518 4359 3623 3 975 9047 73 4 1 chrX 51220233 51221440 -115428856 + L1Md_F2 LINE L1 4375 5585 -298 3 975 7496 73 10 2 chrX 51221441 51222429 -115427867 + L1Md_F2 LINE L1 5587 6582 0 3 975 180 97 0 0 chrX 51222664 51222695 -115427601 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 975 1059 89 7 0 chrX 51222698 51222844 -115427452 - B1_Mm SINE Alu 0 147 1 3 975 183 162 0 0 chrX 51223820 51223857 -115426439 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 975 447 19 0 0 chrX 51224142 51224194 -115426102 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 975 369 0 0 0 chrX 51224194 51224234 -115426062 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 975 1445 151 184 16 chrX 51224248 51224552 -115425744 - ORR1B1 LTR MaLR -39 355 1 3 975 5700 199 44 61 chrX 51224552 51226087 -115424209 - ORR1B1-int LTR MaLR 0 1509 1 3 975 1436 212 145 3 chrX 51226087 51226432 -115423864 - ORR1B1 LTR MaLR 0 394 1 3 975 1418 194 14 94 chrX 51226791 51227046 -115423250 + RMER17C LTR ERVK 1 223 -187 3 975 336 24 0 0 chrX 51227046 51227087 -115423209 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 975 1418 194 14 94 chrX 51227087 51227268 -115423028 + RMER17C LTR ERVK 224 402 -8 3 975 471 337 68 34 chrX 51227375 51227848 -115422448 - L1M2 LINE L1 -925 5218 4730 3 975 556 293 75 29 chrX 51227880 51228068 -115422228 - B3A SINE B2 -6 210 20 3 975 1853 232 2 70 chrX 51228069 51228538 -115421758 - Lx2B LINE L1 -20 6980 6544 3 975 403 267 50 17 chrX 51228572 51228812 -115421484 - L1M2 LINE L1 -1444 4696 4449 3 975 600 326 46 0 chrX 51228830 51229026 -115421270 + B3 SINE B2 12 216 0 3 975 32 26 0 0 chrX 51229313 51229352 -115420944 + AT_rich Low_complexity Low_complexity 1 39 0 3 975 1101 58 7 0 chrX 51229493 51229632 -115420664 - B1_Mus1 SINE Alu -7 141 2 3 975 32 43 0 0 chrX 51230323 51230369 -115419927 + AT_rich Low_complexity Low_complexity 1 46 0 3 975 371 350 81 32 chrX 51230404 51230590 -115419706 + B3 SINE B2 14 208 -8 3 975 931 239 19 0 chrX 51230615 51230820 -115419476 - Lx7 LINE L1 -619 7077 6869 3 975 333 305 0 0 chrX 51230855 51230937 -115419359 - Lx7 LINE L1 -1020 6676 6595 3 975 326 319 8 42 chrX 51231751 51231869 -115418427 - Lx7 LINE L1 -1067 6629 6516 3 975 231 299 14 35 chrX 51232057 51232199 -115418097 - L1M2 LINE L1 -614 5677 5539 3 975 1403 198 84 3 chrX 51232937 51233221 -115417075 - Lx3C LINE L1 -296 5590 5284 3 975 6983 181 38 8 chrX 51233230 51234555 -115415741 + Lx3C LINE L1 5605 6969 -7 3 975 3792 136 0 3 chrX 51234585 51235168 -115415128 + Lx3A LINE L1 6398 6978 -3 3 975 301 351 118 46 chrX 51235249 51235598 -115414698 - L1MEf LINE L1 -4919 1281 908 3 975 25 31 0 0 chrX 51235759 51235791 -115414505 + AT_rich Low_complexity Low_complexity 1 32 0 3 975 294 321 67 0 chrX 51235792 51235926 -115414370 - Lx4B LINE L1 -5 7053 6911 3 975 423 0 0 0 chrX 51236273 51236320 -115413976 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 975 472 198 86 0 chrX 51236322 51236438 -115413858 - Lx9 LINE L1 -147 7497 7372 3 975 2888 58 0 8 chrX 51237534 51237902 -115412394 + RLTR10B2 LTR ERVK 1 365 0 3 975 1308 64 0 34 chrX 51237911 51238090 -115412206 + IAPEY3-int LTR ERVK 40 212 -1775 3 975 478 115 44 37 chrX 51238180 51238315 -115411981 + GA-rich Low_complexity Low_complexity 3 138 0 3 975 415 307 31 31 chrX 51238326 51238551 -115411745 + IAPEY3-int LTR ERVK 1342 1566 -6015 3 975 1528 100 100 0 chrX 51238563 51238792 -115411504 + IAP-d-int LTR ERVK 5004 5255 -1287 3 975 4163 114 8 8 chrX 51238792 51239482 -115410814 + IAPEY3-int LTR ERVK 6965 7680 0 3 975 2613 67 0 65 chrX 51239482 51239866 -115410430 + RLTR10B2 LTR ERVK 1 359 -6 3 975 1132 75 0 0 chrX 51240013 51240159 -115410137 + B1_Mm SINE Alu 2 147 0 3 975 1147 187 61 55 chrX 51241537 51241882 -115408414 - Lx9 LINE L1 0 7644 7298 3 975 279 0 0 0 chrX 51242026 51242057 -115408239 + (TA)n Simple_repeat Simple_repeat 2 32 0 3 975 450 0 0 0 chrX 51242124 51242174 -115408122 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 975 25 108 0 0 chrX 51242618 51242720 -115407576 + AT_rich Low_complexity Low_complexity 1 102 0 3 975 22 0 0 0 chrX 51242801 51242823 -115407473 + AT_rich Low_complexity Low_complexity 1 22 0 3 975 31 58 0 0 chrX 51243126 51243178 -115407118 + AT_rich Low_complexity Low_complexity 1 52 0 3 975 1099 299 101 7 chrX 51243314 51243722 -115406574 - Lx8 LINE L1 -214 7259 6814 3 975 428 211 21 0 chrX 51243728 51243823 -115406473 - L1MA9 LINE L1 -382 5930 5834 3 975 21 0 0 0 chrX 51243941 51243962 -115406334 + AT_rich Low_complexity Low_complexity 1 21 0 3 975 506 232 24 16 chrX 51244008 51244135 -115406161 - B3A SINE B2 -70 128 1 3 975 5506 80 7 14 chrX 51244809 51245573 -115404723 + L1_Mus3 LINE L1 5874 6631 -7 3 975 2574 98 8 17 chrX 51245932 51246294 -115404002 - RLTR10D LTR ERVK 0 359 1 3 121 40436 75 11 13 chrX 51246294 51251679 -115398617 - IAP-d-int LTR ERVK 0 6542 1167 3 976 878 296 63 24 chrX 51251692 51252153 -115398143 + Lx7 LINE L1 5679 6157 -1539 3 976 2211 314 36 34 chrX 51252169 51253095 -115397201 + Lx7 LINE L1 6340 7267 -429 3 976 7419 98 12 2 chrX 51253607 51254763 -115395533 + L1_Mus3 LINE L1 5467 6634 -4 3 976 868 274 63 42 chrX 51254819 51255173 -115395123 - MTD LTR MaLR -12 388 14 3 976 327 267 85 70 chrX 51255176 51255305 -115394991 + B1F SINE Alu 19 149 0 3 976 233 315 46 9 chrX 51255880 51255989 -115394307 + RMER15 LTR ERVL 446 558 -17 3 976 656 372 41 38 chrX 51256008 51256349 -115393947 - MTEb LTR MaLR -37 342 1 3 976 394 254 152 0 chrX 51256683 51256821 -115393475 - Lx3C LINE L1 -2 6974 6816 3 976 280 174 0 0 chrX 51256818 51256864 -115393432 + L1_Mur2 LINE L1 5142 5187 -690 3 976 30 0 0 0 chrX 51257087 51257117 -115393179 + AT_rich Low_complexity Low_complexity 1 30 0 3 976 2968 173 6 26 chrX 51257123 51257670 -115392626 - Lx3A LINE L1 -5 6976 6441 3 976 605 253 105 4 chrX 51257733 51257999 -115392297 + L1MA9 LINE L1 6020 6312 0 3 976 352 374 14 21 chrX 51258125 51258267 -115392029 - B1F1 SINE Alu -1 148 8 3 976 25 95 0 0 chrX 51258496 51258570 -115391726 + AT_rich Low_complexity Low_complexity 1 74 0 3 976 21 0 0 0 chrX 51259230 51259251 -115391045 + AT_rich Low_complexity Low_complexity 1 21 0 3 976 25 75 0 0 chrX 51261215 51261268 -115389028 + AT_rich Low_complexity Low_complexity 1 53 0 3 976 273 146 0 0 chrX 51261289 51261337 -115388959 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 976 249 377 132 24 chrX 51261802 51261968 -115388328 - B4A SINE B4 0 292 109 3 976 326 260 94 0 chrX 51262256 51262383 -115387913 - L1MA9 LINE L1 -1 6311 6173 3 976 1102 119 0 0 chrX 51262925 51263084 -115387212 - B2_Mm2 SINE B2 -35 160 2 3 976 341 336 24 0 chrX 51263090 51263215 -115387081 - Lx8 LINE L1 -235 7238 7111 3 976 232 100 20 0 chrX 51264835 51264885 -115385411 - MT2A LTR ERVL -8 525 475 3 976 188 32 97 0 chrX 51264923 51264954 -115385342 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 3 976 1420 271 88 14 chrX 51265000 51265430 -115384866 - MT2A LTR ERVL -69 464 3 3 976 571 181 14 20 chrX 51265676 51265823 -115384473 + Lx9 LINE L1 7497 7642 -2 3 976 25 75 0 0 chrX 51266277 51266330 -115383966 + AT_rich Low_complexity Low_complexity 1 53 0 3 976 510 17 0 0 chrX 51266518 51266577 -115383719 + (TC)n Simple_repeat Simple_repeat 1 59 0 3 976 1090 59 0 0 chrX 51266577 51266712 -115383584 - B1_Mus2 SINE Alu -12 135 1 3 976 24 32 0 0 chrX 51267976 51268007 -115382289 + AT_rich Low_complexity Low_complexity 1 31 0 3 976 2776 88 13 0 chrX 51269230 51269618 -115380678 - L1_Mus2 LINE L1 -1 6565 6173 3 976 618 205 51 0 chrX 51271591 51271708 -115378588 + ETnERV2-int LTR ERVK 7070 7192 -214 3 976 1072 187 79 19 chrX 51272394 51272661 -115377635 - Lx5 LINE L1 -1069 5981 5699 3 976 3604 159 10 55 chrX 51273005 51273677 -115376619 - RLTR26 LTR ERVK 0 642 1 3 976 270 0 0 0 chrX 51273902 51273932 -115376364 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 976 308 286 0 32 chrX 51275893 51275987 -115374309 - Lx8 LINE L1 -668 6805 6715 3 976 540 45 0 0 chrX 51275987 51276054 -115374242 + (TTCTG)n Simple_repeat Simple_repeat 3 69 0 3 976 351 113 42 0 chrX 51276217 51276288 -115374008 + (CA)n Simple_repeat Simple_repeat 1 74 0 3 976 298 240 40 0 chrX 51277120 51277195 -115373101 - PB1D10 SINE Alu -6 111 34 4 976 24 0 0 0 chrX 51279455 51279479 -115370817 + GC_rich Low_complexity Low_complexity 1 24 0 4 976 5763 52 1 6 chrX 51280940 51281671 -115368625 + L1Md_F2 LINE L1 5854 6581 -1 4 976 22 35 0 0 chrX 51282551 51282580 -115367716 + AT_rich Low_complexity Low_complexity 1 29 0 4 976 1128 52 0 0 chrX 51282587 51282721 -115367575 + B1_Mus2 SINE Alu 4 137 -10 4 976 1239 34 0 0 chrX 51282742 51282888 -115367408 + B1_Mm SINE Alu 1 146 -1 4 976 207 0 0 0 chrX 51282891 51282914 -115367382 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 976 543 92 0 0 chrX 51283255 51283331 -115366965 + BC1_Mm scRNA scRNA 1 76 -76 4 976 207 0 0 0 chrX 51283331 51283354 -115366942 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 4 976 1049 178 168 44 chrX 51283990 51284354 -115365942 - RLTR9E LTR ERVK 0 409 1 4 976 1076 44 7 0 chrX 51284457 51284593 -115365703 + B1_Mus1 SINE Alu 11 147 -1 4 976 227 54 27 0 chrX 51284594 51284631 -115365665 + (CAAAAA)n Simple_repeat Simple_repeat 4 41 0 4 976 4622 152 17 0 chrX 51285488 51286213 -115364083 + RMER19A LTR ERVK 1 737 0 4 976 335 205 46 46 chrX 51286266 51286353 -115363943 + Lx9 LINE L1 6469 6555 -1089 4 976 1036 97 36 18 chrX 51286353 51286521 -115363775 - B2_Mm2 SINE B2 -7 188 18 4 976 1011 329 45 9 chrX 51286522 51286970 -115363326 + Lx9 LINE L1 6563 7026 -618 4 976 1083 250 63 21 chrX 51287000 51287526 -115362770 + Lx9 LINE L1 7097 7644 0 4 976 21 0 0 0 chrX 51287529 51287550 -115362746 + AT_rich Low_complexity Low_complexity 1 21 0 4 976 348 194 38 19 chrX 51287679 51287784 -115362512 - Lx9 LINE L1 0 7644 7538 4 976 239 0 0 31 chrX 51287800 51287832 -115362464 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 4 976 553 277 82 31 chrX 51287854 51288111 -115362185 - Lx9 LINE L1 -176 7468 7199 4 976 1003 290 69 22 chrX 51288135 51288495 -115361801 + MTD LTR MaLR 12 388 -31 4 976 443 266 69 138 chrX 51288504 51288615 -115361681 - B3A SINE B2 -1 215 96 4 976 2818 98 17 15 chrX 51288615 51289021 -115361275 + MTB_Mm LTR MaLR 1 407 0 4 976 443 278 34 152 chrX 51289021 51289140 -115361156 - B3A SINE B2 -97 101 1 4 976 2722 192 40 12 chrX 51289177 51289757 -115360539 - Lx LINE L1 0 6654 6059 4 976 400 278 71 0 chrX 51289895 51290021 -115360275 - MLT1A0 LTR MaLR 0 365 231 4 976 1982 251 46 12 chrX 51290605 51291124 -115359172 + Lx5 LINE L1 6511 7047 -3 4 976 645 288 54 0 chrX 51291770 51291975 -115358321 + B3 SINE B2 1 216 0 4 976 39 0 0 0 chrX 51291975 51292014 -115358282 + AT_rich Low_complexity Low_complexity 1 39 0 4 976 851 81 24 0 chrX 51292014 51292138 -115358158 - L1Md_F2 LINE L1 -19 6563 6437 4 976 230 378 0 0 chrX 51292141 51292252 -115358044 + Lx8 LINE L1 6660 6770 -703 4 976 3574 96 0 2 chrX 51292270 51292784 -115357512 - L1_Mus1 LINE L1 -138 6429 5917 4 976 423 0 0 0 chrX 51292929 51292976 -115357320 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 976 207 0 0 0 chrX 51292976 51292998 -115357298 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 976 515 308 183 5 chrX 51293206 51293408 -115356888 - ORR1D1 LTR MaLR -108 266 29 4 976 459 318 34 23 chrX 51293440 51293617 -115356679 - Lx8 LINE L1 -451 7022 6844 4 976 679 355 6 6 chrX 51293669 51293981 -115356315 + Lx8 LINE L1 6459 6770 -703 4 976 3289 126 21 8 chrX 51294434 51294948 -115355348 + Lx LINE L1 6128 6648 -6 4 976 219 170 0 21 chrX 51294997 51295045 -115355251 + A-rich Low_complexity Low_complexity 3 49 0 4 976 241 327 26 43 chrX 51295046 51295161 -115355135 + MIRm SINE MIR 35 147 -129 4 976 1388 297 26 12 chrX 51295449 51295871 -115354425 - Lx6 LINE L1 -9 7451 7024 4 976 229 203 14 42 chrX 51296100 51296172 -115354124 + GA-rich Low_complexity Low_complexity 3 72 0 4 976 263 312 0 0 chrX 51297082 51297162 -115353134 - Lx8 LINE L1 -948 6525 6446 4 976 268 312 66 19 chrX 51297180 51297204 -115353092 - Lx8 LINE L1 -1154 6319 6296 4 976 5055 44 3 0 chrX 51297204 51297814 -115352482 + L1Md_F3 LINE L1 5973 6584 0 4 976 268 312 66 19 chrX 51297814 51298001 -115352295 - Lx8 LINE L1 -1178 6295 6099 4 976 416 291 86 8 chrX 51298284 51298412 -115351884 + RSINE1 SINE B4 8 145 -20 4 976 363 44 0 0 chrX 51298415 51298460 -115351836 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 976 212 184 0 0 chrX 51298460 51298498 -115351798 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 4 976 601 355 73 23 chrX 51298501 51298855 -115351441 + Lx8 LINE L1 6713 7084 -389 4 976 2671 37 0 0 chrX 51299225 51299550 -115350746 - IAPEY2_LTR LTR ERVK 0 357 33 4 976 23 0 0 0 chrX 51301065 51301088 -115349208 + AT_rich Low_complexity Low_complexity 1 23 0 4 976 570 320 34 88 chrX 51301304 51301633 -115348663 + MTE2a LTR MaLR 15 335 -44 4 976 24 0 0 0 chrX 51301656 51301680 -115348616 + AT_rich Low_complexity Low_complexity 1 24 0 4 976 189 69 0 0 chrX 51302182 51302192 -115348104 + (TA)n Simple_repeat Simple_repeat 1 10 0 4 976 276 30 0 0 chrX 51302192 51302225 -115348071 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 976 189 69 0 0 chrX 51302225 51302243 -115348053 + (TA)n Simple_repeat Simple_repeat 1 18 0 4 976 923 196 134 13 chrX 51303228 51303533 -115346763 - Lx9 LINE L1 -1 7643 7302 4 976 460 231 53 26 chrX 51303534 51303685 -115346611 + Lx9 LINE L1 6781 6935 -709 4 976 495 311 43 91 chrX 51303896 51304126 -115346170 - ID_B1 SINE B4 0 224 6 4 976 631 247 206 11 chrX 51304161 51304341 -115345955 - B3 SINE B2 0 216 2 4 976 1510 144 4 8 chrX 51304391 51304629 -115345667 - Lx4A LINE L1 -17 7041 6805 4 976 1075 183 31 0 chrX 51304633 51304857 -115345439 + Lx9 LINE L1 6925 7155 -489 4 976 3284 193 19 10 chrX 51304861 51305561 -115344735 + Lx3C LINE L1 6057 6762 -214 4 976 647 212 8 0 chrX 51305734 51305852 -115344444 + ETnERV2-int LTR ERVK 7070 7188 -218 4 976 356 264 25 8 chrX 51306343 51306465 -115343831 + RMER16-int LTR ERVK 181 304 -6940 4 976 621 0 0 0 chrX 51306536 51306605 -115343691 + (GA)n Simple_repeat Simple_repeat 2 70 0 4 976 1890 180 145 36 chrX 51306605 51307107 -115343189 + RMER16-int LTR ERVK 263 819 -4587 4 976 389 165 268 0 chrX 51307112 51307209 -115343087 + RMER16-int LTR ERVK 938 1060 -5077 4 976 2134 158 80 15 chrX 51307230 51307704 -115342592 + ETnERV2-int LTR ERVK 3096 3600 -3806 4 976 369 152 19 9 chrX 51307704 51307810 -115342486 + (TA)n Simple_repeat Simple_repeat 1 107 0 4 976 484 386 60 0 chrX 51307836 51308069 -115342227 - B4A SINE B4 -20 272 26 4 976 321 321 19 9 chrX 51308209 51308316 -115341980 + MLT1C LTR MaLR 360 467 0 4 976 23 33 0 0 chrX 51309799 51309829 -115340467 + AT_rich Low_complexity Low_complexity 1 30 0 4 976 275 65 22 0 chrX 51309915 51309961 -115340335 + (TTG)n Simple_repeat Simple_repeat 2 48 0 4 976 25 0 0 0 chrX 51310759 51310784 -115339512 + AT_rich Low_complexity Low_complexity 1 25 0 4 976 302 359 72 66 chrX 51312291 51312443 -115337853 - RSINE1 SINE B4 -1 164 12 4 976 2067 211 14 60 chrX 51312574 51313154 -115337142 - RLTR31_Mur LTR ERVK 0 553 1 4 976 515 335 55 47 chrX 51313277 51313659 -115336637 - Lx8 LINE L1 -876 6597 6213 4 976 1049 345 49 20 chrX 51313815 51314425 -115335871 - Lx8 LINE L1 -225 7248 6621 4 976 1136 143 11 5 chrX 51314440 51314630 -115335666 + B2_Mm1t SINE B2 3 193 0 4 976 35 54 0 0 chrX 51314730 51314786 -115335510 + AT_rich Low_complexity Low_complexity 1 56 0 4 976 6414 46 1 0 chrX 51315045 51315825 -115334471 - L1Md_F2 LINE L1 0 6582 5802 4 976 454 355 134 53 chrX 51316186 51316448 -115333848 + B4A SINE B4 9 291 -1 4 976 261 295 0 18 chrX 51316467 51316581 -115333715 + (CA)n Simple_repeat Simple_repeat 1 112 0 4 976 265 298 78 17 chrX 51316621 51316737 -115333559 + MTE2b LTR MaLR 3 125 -294 4 976 870 316 49 7 chrX 51316761 51317048 -115333248 + MTE2b LTR MaLR 81 379 0 4 976 416 206 165 2 chrX 51317675 51317844 -115332452 + L1_Mur2 LINE L1 492 682 -5620 4 976 195 42 0 0 chrX 51317996 51318020 -115332276 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 4 976 6868 116 27 4 chrX 51318020 51319339 -115330957 - Lx LINE L1 -12 6642 5301 4 976 3078 48 0 0 chrX 51319344 51319701 -115330595 + IAPEY2_LTR LTR ERVK 1 357 0 4 976 663 152 50 50 chrX 51319701 51319860 -115330436 + IAPLTR4_I LTR ERVK 22 180 -1290 4 976 8569 131 13 38 chrX 51319859 51321355 -115328941 + IAPEY3-int LTR ERVK 524 1982 -5698 4 976 3268 76 11 0 chrX 51321332 51321779 -115328517 + IAPEY3-int LTR ERVK 2238 2689 -4991 4 976 185 380 53 0 chrX 51321794 51321907 -115328389 + L3b LINE CR1 335 453 -29 4 976 3677 90 9 7 chrX 51321908 51322447 -115327849 + IAPEy-int LTR ERVK 6974 7513 0 4 976 2741 34 0 0 chrX 51322457 51322783 -115327513 + IAPEY2_LTR LTR ERVK 32 357 0 4 976 2654 191 2 2 chrX 51322783 51323327 -115326969 - L1_Mur2 LINE L1 -582 5295 4752 4 976 1400 250 92 30 chrX 51323583 51324115 -115326181 - RLTR12A LTR ERVK 0 568 4 4 976 3370 146 50 0 chrX 51324123 51324700 -115325596 + L1Md_F2 LINE L1 364 969 -5647 4 976 6559 131 37 1 chrX 51324702 51325964 -115324332 + L1Md_T LINE L1 98 1123 -5493 4 976 295 151 108 14 chrX 51325959 51326033 -115324263 + L1Md_T LINE L1 4600 4680 -1203 4 976 5262 17 0 0 chrX 51326000 51326637 -115323659 + L1Md_T LINE L1 4950 5586 -297 4 976 8057 54 0 0 chrX 51326637 51327632 -115322664 + L1Md_T LINE L1 5587 6581 -1 4 976 1482 58 10 0 chrX 51327682 51327888 -115322408 + L1Md_F2 LINE L1 5783 5990 -592 4 976 231 36 0 0 chrX 51327888 51327916 -115322380 + (A)n Simple_repeat Simple_repeat 1 28 0 4 976 31652 89 1 6 chrX 51327916 51333338 -115316958 + L1Md_F2 LINE L1 1105 6496 -86 4 976 1160 146 319 92 chrX 51333341 51333658 -115316638 + RLTR9C LTR ERVK 2 390 -3 4 976 516 16 0 0 chrX 51333658 51333719 -115316577 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 976 684 286 64 37 chrX 51333725 51333943 -115316353 + B4 SINE B4 66 289 -3 4 976 991 284 45 5 chrX 51333943 51334325 -115315971 + L1MB3 LINE L1 5786 6182 -1 4 976 1278 86 10 26 chrX 51334482 51334674 -115315622 - B2_Mm1t SINE B2 -4 189 1 4 976 253 323 86 31 chrX 51335306 51335434 -115314862 + MIRb SINE MIR 127 261 -1 4 976 7104 44 0 0 chrX 51335660 51336551 -115313745 - L1Md_F2 LINE L1 0 6582 5692 4 976 646 250 87 0 chrX 51336612 51336784 -115313512 - B3A SINE B2 -11 187 1 4 976 1609 243 40 35 chrX 51337120 51337525 -115312771 - MTD LTR MaLR 0 419 13 4 976 3549 132 51 0 chrX 51337553 51338137 -115312159 + L1Md_F LINE L1 282 895 -5624 5 976 7326 53 16 14 chrX 51338137 51339087 -115311209 + L1Md_F2 LINE L1 5631 6582 0 5 976 384 234 71 9 chrX 51339231 51339343 -115310953 + LTR48B LTR ERV1 524 642 -2 5 976 279 262 61 104 chrX 51339345 51339460 -115310836 + Cheshire DNA MER1_type 1400 1509 -911 5 976 680 304 56 8 chrX 51339816 51340065 -115310231 - MER2 DNA MER2_type 0 345 85 5 976 248 320 0 0 chrX 51340079 51340154 -115310142 + CT-rich Low_complexity Low_complexity 5 79 0 5 976 395 315 71 47 chrX 51340156 51340183 -115310113 - ID_B1 SINE B4 0 224 160 5 976 434 317 20 0 chrX 51340183 51340284 -115310012 - PB1D10 SINE Alu -10 107 5 5 976 395 315 71 47 chrX 51340284 51340326 -115309970 - ID_B1 SINE B4 0 159 51 5 976 2423 116 144 5 chrX 51340486 51340909 -115309387 + RLTR45 LTR ERVK 1 482 0 5 976 63 67 0 0 chrX 51342427 51342546 -115307750 + AT_rich Low_complexity Low_complexity 1 119 0 5 976 2108 138 64 9 chrX 51343547 51343890 -115306406 + ORR1B2 LTR MaLR 1 362 -5 5 976 555 261 0 0 chrX 51343989 51344104 -115306192 - PB1D10 SINE Alu 0 117 3 5 976 418 368 96 44 chrX 51344191 51344269 -115306027 + Tigger15a DNA TcMar 197 273 -442 5 976 922 236 21 82 chrX 51344269 51344657 -115305639 - RLTR9A LTR ERVK 0 368 5 5 976 418 368 96 44 chrX 51344657 51344942 -115305354 + Tigger15a DNA TcMar 274 579 -136 5 976 187 227 88 29 chrX 51344952 51345020 -115305276 - MIRb SINE MIR 0 262 191 5 976 304 303 73 16 chrX 51345020 51345144 -115305152 + Tigger15a DNA TcMar 575 705 -10 5 976 406 313 120 16 chrX 51345250 51345558 -115304738 - Tigger7 DNA MER2_type -3 2488 2129 5 976 419 308 63 0 chrX 51345557 51345700 -115304596 - Tigger7 DNA MER2_type -2186 305 154 5 976 252 0 0 0 chrX 51345700 51345728 -115304568 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 976 2738 98 28 8 chrX 51346004 51346404 -115303892 - LTRIS2 LTR ERV1 -156 408 1 5 976 781 249 69 52 chrX 51347003 51347367 -115302929 + L1MA4 LINE L1 5546 5915 -385 5 976 2422 120 55 33 chrX 51347453 51347939 -115302357 + MT2B2 LTR ERVL 2 582 -2 5 976 180 213 85 0 chrX 51348442 51348489 -115301807 + L3 LINE CR1 4123 4173 -316 5 976 998 248 49 109 chrX 51348533 51349047 -115301249 - RMER12 LTR ERVK 0 1322 645 5 976 4553 183 78 33 chrX 51349054 51349179 -115301117 - RMER12 LTR ERVK -399 923 836 5 976 648 36 0 0 chrX 51349179 51349262 -115301034 + (CA)n Simple_repeat Simple_repeat 2 84 0 5 976 4553 148 52 18 chrX 51349262 51350012 -115300284 - RMER12 LTR ERVK -487 835 57 5 976 1660 201 93 3 chrX 51350024 51350369 -115299927 + MTC LTR MaLR 1 376 -45 5 976 34879 51 6 2 chrX 51350370 51356299 -115293997 - L1Md_F2 LINE L1 -1 6581 631 5 976 229 204 20 20 chrX 51356299 51356349 -115293947 + MTC LTR MaLR 362 411 -8 5 976 22 35 0 0 chrX 51356829 51356858 -115293438 + AT_rich Low_complexity Low_complexity 1 29 0 5 976 23 33 0 0 chrX 51357029 51357059 -115293237 + AT_rich Low_complexity Low_complexity 1 30 0 5 976 2358 108 11 45 chrX 51357063 51357441 -115292855 - RLTR8 LTR ERVK 0 365 1 5 976 626 259 148 0 chrX 51357613 51357802 -115292494 + B4A SINE B4 4 220 -72 5 976 441 0 0 0 chrX 51357828 51357877 -115292419 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 976 483 221 126 11 chrX 51358085 51358268 -115292028 - L1MC4a LINE L1 -1329 6553 6350 5 976 4357 72 16 0 chrX 51358714 51359285 -115291011 + L1Md_F2 LINE L1 5994 6573 -9 5 976 215 81 0 51 chrX 51360675 51360714 -115289582 + (TTA)n Simple_repeat Simple_repeat 3 39 0 5 976 1405 79 0 26 chrX 51360811 51361006 -115289290 - B2_Mm2 SINE B2 -3 192 3 5 976 923 265 166 6 chrX 51361254 51361580 -115288716 + MTEa LTR MaLR 1 378 -1 5 976 31 44 0 0 chrX 51361595 51361640 -115288656 + AT_rich Low_complexity Low_complexity 1 45 0 5 976 290 194 0 14 chrX 51361640 51361713 -115288583 + (TATG)n Simple_repeat Simple_repeat 1 72 0 5 976 17565 81 5 11 chrX 51361798 51364369 -115285927 + L1Md_F2 LINE L1 3030 5585 -298 5 976 7796 60 4 3 chrX 51364370 51365363 -115284933 + L1Md_F2 LINE L1 5587 6580 -2 5 976 27976 92 21 17 chrX 51365364 51366464 -115283832 + L1Md_F2 LINE L1 985 2070 -3813 5 976 207 0 0 0 chrX 51366464 51366487 -115283809 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 976 27976 85 25 21 chrX 51366487 51366754 -115283542 + L1Md_F2 LINE L1 2071 2351 -3532 5 976 651 60 0 0 chrX 51366754 51366838 -115283458 + (GA)n Simple_repeat Simple_repeat 2 85 0 5 976 27976 85 25 21 chrX 51366838 51369328 -115280968 + L1Md_F2 LINE L1 2352 4910 -973 5 976 230 161 59 88 chrX 51369328 51369396 -115280900 - RMER20A LTR ERVK -265 251 186 5 976 27976 85 25 21 chrX 51369396 51370049 -115280247 + L1Md_F2 LINE L1 4911 5583 -300 5 976 7006 86 20 5 chrX 51370051 51371029 -115279267 + L1Md_F2 LINE L1 5587 6579 -3 5 976 25 0 0 0 chrX 51371382 51371407 -115278889 + AT_rich Low_complexity Low_complexity 1 25 0 5 976 30 0 0 0 chrX 51371976 51372006 -115278290 + AT_rich Low_complexity Low_complexity 1 30 0 5 976 464 253 56 22 chrX 51373436 51373614 -115276682 - Lx4B LINE L1 -9 7049 6866 5 976 1012 122 184 0 chrX 51373664 51373876 -115276420 - Lx2A LINE L1 -41 6967 6725 5 976 2676 209 37 27 chrX 51373933 51374909 -115275387 - L1VL4 LINE L1 -3979 1898 899 5 976 321 26 0 0 chrX 51375249 51375287 -115275009 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 5 976 512 162 0 35 chrX 51375288 51375403 -115274893 - Lx3A LINE L1 -9 6972 6862 5 976 2484 143 41 24 chrX 51375525 51376034 -115274262 - MusHAL1 LINE L1 -58 2654 2137 5 976 569 261 0 14 chrX 51376077 51376221 -115274075 - B1_Mus1 SINE Alu -5 143 2 5 976 270 247 0 64 chrX 51376323 51376401 -115273895 + B1_Mur1 SINE Alu 46 118 -31 5 976 266 0 0 29 chrX 51376420 51376455 -115273841 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 976 207 188 0 0 chrX 51376508 51376593 -115273703 + (CA)n Simple_repeat Simple_repeat 1 85 0 5 976 216 111 0 0 chrX 51376600 51376636 -115273660 + (AGGGGG)n Simple_repeat Simple_repeat 3 38 0 5 976 470 319 47 38 chrX 51376772 51376984 -115273312 + B3 SINE B2 2 215 -1 5 976 318 299 56 40 chrX 51377308 51377469 -115272827 + B3 SINE B2 5 170 -28 5 976 365 253 19 108 chrX 51378383 51378513 -115271783 - B3 SINE B2 -18 198 86 5 976 786 75 0 0 chrX 51378513 51378619 -115271677 + (GA)n Simple_repeat Simple_repeat 1 106 0 5 976 365 253 19 108 chrX 51378619 51378701 -115271595 - B3 SINE B2 -131 85 5 5 976 435 280 28 57 chrX 51378875 51379087 -115271209 + B3 SINE B2 4 209 -7 5 976 579 262 46 40 chrX 51379267 51379442 -115270854 + MTD LTR MaLR 220 395 -24 5 976 219 204 0 0 chrX 51379751 51379805 -115270491 + (CAGAGA)n Simple_repeat Simple_repeat 1 54 0 5 977 994 153 121 0 chrX 51380698 51380888 -115269408 + RMER4A LTR ERVK 254 466 0 5 977 465 240 41 8 chrX 51380888 51381010 -115269286 - RMER1C Other Other -219 1123 998 5 977 636 89 0 0 chrX 51381022 51381123 -115269173 + (TG)n Simple_repeat Simple_repeat 2 102 0 5 977 524 219 23 8 chrX 51382965 51383094 -115267202 + MTD LTR MaLR 1 131 -290 5 977 554 91 23 0 chrX 51383160 51383248 -115267048 + L1_Mur1 LINE L1 2569 2658 -3228 5 977 438 160 0 0 chrX 51383238 51383313 -115266983 + Lx2 LINE L1 5864 5938 -1059 5 977 1014 256 30 33 chrX 51383329 51383660 -115266636 - Lx7 LINE L1 -677 7019 6690 5 977 335 303 25 19 chrX 51383720 51383878 -115266418 - Lx7 LINE L1 -1685 6011 5853 5 977 414 327 0 0 chrX 51383883 51383993 -115266303 + MTD LTR MaLR 102 211 -208 5 977 536 270 144 0 chrX 51383996 51384170 -115266126 + B3 SINE B2 1 199 -17 5 977 24 53 0 0 chrX 51384173 51384211 -115266085 + AT_rich Low_complexity Low_complexity 1 38 0 5 977 568 250 96 26 chrX 51384233 51384389 -115265907 + MTD LTR MaLR 193 359 -60 5 977 327 202 10 29 chrX 51384394 51384496 -115265800 + Lx2 LINE L1 6898 6997 0 5 977 726 153 0 27 chrX 51384925 51385073 -115265223 + Lx LINE L1 6508 6651 -3 5 977 1775 105 0 4 chrX 51385074 51385342 -115264954 + L1_Mus4 LINE L1 6367 6633 -3 5 977 998 136 0 0 chrX 51385391 51385538 -115264758 + B1_Mus2 SINE Alu 1 147 0 5 977 3610 145 5 8 chrX 51385639 51386258 -115264038 + CYRA11_Mm Unknown Y-chromosome 1 617 0 5 977 354 315 38 15 chrX 51386175 51386307 -115263989 + MLT1G LTR MaLR 59 193 -398 5 977 189 0 0 0 chrX 51387869 51387890 -115262406 + (GAGTG)n Simple_repeat Simple_repeat 3 23 0 5 977 527 183 192 64 chrX 51388439 51388558 -115261738 - RMER1C Other Other 0 1342 1195 5 977 609 52 0 0 chrX 51388558 51388635 -115261661 + (GAAAA)n Simple_repeat Simple_repeat 2 78 0 5 977 527 183 192 64 chrX 51388635 51388702 -115261594 - RMER1C Other Other -148 1194 1132 5 977 204 125 0 0 chrX 51388931 51388963 -115261333 + (T)n Simple_repeat Simple_repeat 1 32 0 5 977 723 139 60 12 chrX 51388965 51389132 -115261164 - L1Md_F3 LINE L1 -2 6582 6408 5 977 739 176 15 0 chrX 51389148 51389284 -115261012 - B1_Mur4 SINE Alu -10 140 3 5 977 453 256 101 0 chrX 51389302 51389475 -115260821 - L1_Mur3 LINE L1 -637 5519 5343 5 977 305 245 10 48 chrX 51389605 51389708 -115260588 - L1M2 LINE L1 -922 5221 5123 5 977 358 269 106 28 chrX 51389811 51389991 -115260305 - L1_Rod LINE L1 -807 5040 4847 5 977 327 256 69 11 chrX 51390027 51390114 -115260182 - PB1D10 SINE Alu 0 117 26 5 977 382 261 43 11 chrX 51390046 51390139 -115260157 - ID_B1 SINE B4 -51 173 78 5 977 739 272 63 55 chrX 51390142 51390318 -115259978 - L1M2 LINE L1 -1233 4910 4746 5 977 990 129 0 13 chrX 51390318 51390467 -115259829 - B1_Mus1 SINE Alu 0 148 2 5 977 739 272 63 55 chrX 51390467 51390479 -115259817 - L1M2 LINE L1 -1398 4745 4739 5 977 3498 31 0 2 chrX 51390479 51390895 -115259401 - L1Md_F2 LINE L1 -2 6580 6166 5 977 739 272 63 55 chrX 51390895 51391214 -115259082 - L1M2 LINE L1 -1405 4738 4398 5 977 416 297 0 26 chrX 51391220 51391334 -115258962 - B1F SINE Alu -38 111 1 5 977 28 48 0 0 chrX 51391402 51391444 -115258852 + AT_rich Low_complexity Low_complexity 1 42 0 5 977 678 286 42 12 chrX 51391445 51391777 -115258519 - L1M2 LINE L1 -1808 4332 3991 5 977 288 156 55 47 chrX 51391787 51391915 -115258381 + (TTATA)n Simple_repeat Simple_repeat 1 129 0 5 977 217 117 19 149 chrX 51391954 51392115 -115258181 + (TTATA)n Simple_repeat Simple_repeat 1 140 0 5 977 273 172 7 92 chrX 51392165 51392306 -115257990 + (TTATA)n Simple_repeat Simple_repeat 5 133 0 5 977 848 267 95 28 chrX 51392307 51392800 -115257496 - L1M2 LINE L1 -2105 4038 3513 5 977 577 129 17 0 chrX 51392800 51392916 -115257380 + (CA)n Simple_repeat Simple_repeat 2 119 0 5 977 242 160 76 0 chrX 51392917 51393048 -115257248 + (TA)n Simple_repeat Simple_repeat 2 142 0 5 977 538 140 18 0 chrX 51393110 51393224 -115257072 + (CA)n Simple_repeat Simple_repeat 2 117 0 5 977 236 164 36 0 chrX 51393225 51393280 -115257016 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 977 585 234 0 0 chrX 51393655 51393766 -115256530 - B1_Mur1 SINE Alu -13 136 26 5 977 370 305 54 47 chrX 51394853 51395001 -115255295 + RSINE1 SINE B4 11 159 -6 5 977 216 67 0 0 chrX 51395029 51395059 -115255237 + (TAA)n Simple_repeat Simple_repeat 1 30 0 6 977 23 33 0 0 chrX 51395301 51395331 -115254965 + AT_rich Low_complexity Low_complexity 1 30 0 6 977 264 290 0 0 chrX 51395865 51395934 -115254362 + GA-rich Low_complexity Low_complexity 1 69 0 6 977 845 224 11 44 chrX 51396664 51396846 -115253450 - B3 SINE B2 -14 202 27 6 977 1051 97 0 14 chrX 51396850 51396997 -115253299 - B1_Mm SINE Alu -1 146 2 6 977 239 284 85 12 chrX 51397133 51397215 -115253081 - Charlie5 DNA MER1_type -2536 88 1 6 977 274 214 0 0 chrX 51399032 51399088 -115251208 + MER33 DNA MER1_type 6 61 -263 6 977 444 111 0 0 chrX 51400381 51400453 -115249843 + (TC)n Simple_repeat Simple_repeat 1 72 0 6 977 423 0 0 0 chrX 51400466 51400513 -115249783 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 977 495 0 0 0 chrX 51401215 51401270 -115249026 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 977 215 224 0 108 chrX 51402533 51402554 -115247742 - ID4 SINE ID -18 65 8 6 977 226 209 0 23 chrX 51402554 51402598 -115247698 - ID SINE ID -174 50 8 6 977 265 312 27 18 chrX 51402596 51402707 -115247589 - ID4_ SINE ID -37 115 4 6 977 417 270 39 8 chrX 51404355 51404482 -115245814 + MTD LTR MaLR 1 131 -288 6 977 475 125 23 0 chrX 51404552 51404640 -115245656 + L1_Mur1 LINE L1 2569 2658 -3228 6 977 482 120 0 0 chrX 51404630 51404705 -115245591 + Lx2 LINE L1 5864 5938 -1059 6 977 632 250 55 10 chrX 51404721 51404923 -115245373 - Lx7 LINE L1 -680 7016 6806 6 977 2080 106 9 3 chrX 51404918 51405259 -115245037 - L1_Mm LINE L1 -498 5385 5043 6 977 311 73 0 0 chrX 51405257 51405298 -115244998 + L1Md_F2 LINE L1 5547 5587 -296 6 977 6420 116 14 1 chrX 51405301 51406265 -115244031 + L1Md_F2 LINE L1 5591 6567 -15 6 977 325 350 73 6 chrX 51406595 51406759 -115243537 - HAL1 LINE L1 -929 1578 1404 6 977 21 57 0 0 chrX 51406823 51406858 -115243438 + AT_rich Low_complexity Low_complexity 1 35 0 6 977 1585 234 32 9 chrX 51407567 51408153 -115242143 + L1_Mur2 LINE L1 919 1523 -4354 6 977 877 151 7 7 chrX 51408153 51408300 -115241996 + B1_Mus1 SINE Alu 2 148 0 6 977 1112 253 70 30 chrX 51408300 51408591 -115241705 + L1_Mur2 LINE L1 1524 1824 -4053 6 977 1575 132 79 183 chrX 51408622 51409152 -115241144 - IAPLTR2_Mm LTR ERVK 0 475 1 6 977 5912 60 16 23 chrX 51409152 51409987 -115240309 - IAPEz-int LTR ERVK 0 6481 5653 6 977 2448 85 0 3 chrX 51409982 51410324 -115239972 - IAPEz-int LTR ERVK -4781 1700 1360 6 977 3222 103 13 34 chrX 51410324 51410979 -115239317 - IAPEz-int LTR ERVK -5818 663 168 6 977 248 309 0 0 chrX 51410979 51411034 -115239262 - RLTR27 LTR ERVK -34 275 221 6 977 873 119 101 6 chrX 51411034 51411203 -115239093 - IAPEz-int LTR ERVK -6288 193 9 6 977 566 134 102 46 chrX 51411204 51411425 -115238871 - IAPLTR2_Mm LTR ERVK 0 475 213 6 977 219 286 0 0 chrX 51411425 51411481 -115238815 + GA-rich Low_complexity Low_complexity 1 56 0 6 977 229 186 69 28 chrX 51411484 51411556 -115238740 - IAPLTR2b LTR ERVK -137 274 200 6 977 20402 17 2 0 chrX 51411571 51414779 -115235517 - L1Md_T LINE L1 0 6582 3367 6 977 2917 51 0 3 chrX 51414768 51415159 -115235137 + L1_Mm LINE L1 2741 3130 -2753 6 977 1445 123 35 9 chrX 51415159 51415388 -115234908 - IAPLTR2b LTR ERVK -92 235 1 6 977 3468 241 52 14 chrX 51415420 51416327 -115233969 + Lx5 LINE L1 5811 6754 -296 6 977 8233 140 7 22 chrX 51416577 51418031 -115232265 + L1MD LINE L1 2101 3537 -377 6 977 2547 134 7 17 chrX 51418031 51418440 -115231856 - RLTR9E LTR ERVK -4 405 1 6 977 8233 218 8 15 chrX 51418440 51418664 -115231632 + L1MD LINE L1 3538 3779 -2367 6 977 10546 88 53 16 chrX 51418664 51419348 -115230948 - RLTR45-int LTR ERVK -1753 5491 4762 6 977 189 0 0 0 chrX 51419348 51419369 -115230927 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 6 977 10546 88 53 16 chrX 51419369 51420413 -115229883 - RLTR45-int LTR ERVK -2483 4761 3702 6 977 6048 217 36 35 chrX 51420411 51422169 -115228127 - ETnERV2-int LTR ERVK -5568 1685 175 6 977 927 28 0 0 chrX 51422171 51422278 -115228018 + U6 snRNA snRNA 1 107 0 6 977 21875 26 0 0 chrX 51422278 51424993 -115225303 + L1Md_T LINE L1 2871 5586 -297 6 977 8266 40 1 1 chrX 51424993 51425989 -115224307 + L1Md_T LINE L1 5587 6582 0 6 977 1061 127 16 16 chrX 51426527 51426711 -115223585 - ETnERV2-int LTR ERVK -5622 186 3 6 977 4111 155 68 39 chrX 51426716 51427561 -115222735 - RLTR13A3 LTR ERVK -2 976 108 6 977 2463 149 30 0 chrX 51427565 51428028 -115222268 + L1_Mus1 LINE L1 4906 5382 -501 6 977 5616 117 8 7 chrX 51428025 51428905 -115221391 + L1_Mus1 LINE L1 5652 6532 -35 6 977 19315 166 12 98 chrX 51428902 51433760 -115216536 - L1_Mm LINE L1 -2 5881 1445 6 977 387 307 0 26 chrX 51434021 51434138 -115216158 + ID_B1 SINE B4 102 215 -9 6 977 28 0 0 0 chrX 51434390 51434418 -115215878 + AT_rich Low_complexity Low_complexity 1 28 0 6 977 221 314 0 0 chrX 51434431 51434482 -115215814 - ID4 SINE ID -97 55 5 6 977 1217 101 0 0 chrX 51434601 51434769 -115215527 + B2_Mm2 SINE B2 1 168 -27 6 977 32 0 0 0 chrX 51434774 51434806 -115215490 + AT_rich Low_complexity Low_complexity 1 32 0 6 977 186 43 0 0 chrX 51435004 51435027 -115215269 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 977 348 24 0 0 chrX 51435254 51435295 -115215001 + (CAA)n Simple_repeat Simple_repeat 2 42 0 6 977 604 286 133 45 chrX 51435330 51435526 -115214770 + B4A SINE B4 1 229 -63 6 977 971 124 7 0 chrX 51435526 51435671 -115214625 + B1_Mus1 SINE Alu 2 147 -1 6 977 555 53 0 0 chrX 51435673 51435748 -115214548 + (TG)n Simple_repeat Simple_repeat 2 76 0 6 977 604 286 133 45 chrX 51435748 51435812 -115214484 + B4A SINE B4 230 287 -5 6 977 817 298 0 0 chrX 51436006 51436187 -115214109 + B3 SINE B2 2 182 -34 6 977 253 311 101 28 chrX 51436988 51437097 -115213199 - B1F SINE Alu -32 117 1 6 977 180 77 0 0 chrX 51437253 51437279 -115213017 + (TTTTTA)n Simple_repeat Simple_repeat 5 30 0 6 977 315 0 0 0 chrX 51437551 51437586 -115212710 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 977 519 45 0 0 chrX 51437586 51437651 -115212645 + (GA)n Simple_repeat Simple_repeat 1 66 0 6 977 23 0 0 0 chrX 51437720 51437743 -115212553 + AT_rich Low_complexity Low_complexity 1 23 0 6 977 28 48 0 0 chrX 51437918 51437960 -115212336 + AT_rich Low_complexity Low_complexity 1 42 0 6 977 24 0 0 0 chrX 51437978 51438002 -115212294 + AT_rich Low_complexity Low_complexity 1 24 0 6 977 405 0 0 0 chrX 51438585 51438630 -115211666 + (TTA)n Simple_repeat Simple_repeat 3 47 0 6 977 21 36 0 0 chrX 51438955 51438983 -115211313 + AT_rich Low_complexity Low_complexity 1 28 0 6 977 4723 160 29 14 chrX 51438985 51439839 -115210457 - Lx LINE L1 -1 6653 5787 6 977 7514 196 197 31 chrX 51439839 51441347 -115208949 - L1_Mur1 LINE L1 -1126 4760 2928 6 977 761 173 0 8 chrX 51441347 51441481 -115208815 - B1_Mus2 SINE Alu -12 135 3 6 977 7514 196 197 31 chrX 51441481 51441965 -115208331 - L1_Mur1 LINE L1 -2959 2927 2346 6 977 401 34 0 33 chrX 51441965 51442025 -115208271 + (CAAAA)n Simple_repeat Simple_repeat 4 61 0 6 977 7514 196 197 31 chrX 51442025 51442545 -115207751 - L1_Mur1 LINE L1 -3541 2345 1830 6 977 891 225 55 0 chrX 51442558 51442758 -115207538 - B3 SINE B2 -5 211 1 6 977 203 0 37 0 chrX 51442777 51442804 -115207492 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 6 977 434 289 34 0 chrX 51442935 51443056 -115207240 - B1F SINE Alu -9 140 21 6 977 501 269 0 0 chrX 51443114 51443222 -115207074 - B3 SINE B2 -11 205 98 6 977 3359 155 19 23 chrX 51444110 51444752 -115205544 - YREP_Mm Unknown Unknown -36 1776 1138 6 977 244 253 40 0 chrX 51444752 51444827 -115205469 - Lx3B LINE L1 -888 6085 6008 6 977 989 153 6 0 chrX 51444898 51445074 -115205222 - YREP_Mm Unknown Unknown -650 1162 986 6 977 279 48 0 0 chrX 51445106 51445148 -115205148 - YREP_Mm Unknown Unknown -785 1027 986 6 977 392 333 154 35 chrX 51445153 51445380 -115204916 - L2 LINE L2 -1119 2300 2047 6 977 437 353 45 7 chrX 51445572 51445726 -115204570 + B4A SINE B4 131 290 -2 6 977 182 344 49 24 chrX 51446200 51446364 -115203932 - L2 LINE L2 -1758 1661 1494 6 977 5273 144 9 6 chrX 51447713 51448599 -115201697 - Lx3A LINE L1 -6 6975 6087 6 977 467 340 37 5 chrX 51449223 51449412 -115200884 - B4A SINE B4 -26 266 72 6 977 412 144 85 74 chrX 51449662 51449838 -115200458 - RMER4B LTR ERVK -333 252 26 6 977 427 319 90 57 chrX 51449957 51450157 -115200139 + RMER15 LTR ERVL 244 451 -124 6 977 180 0 0 0 chrX 51450157 51450177 -115200119 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 977 427 319 90 57 chrX 51450177 51450255 -115200041 + RMER15 LTR ERVL 452 531 -44 6 977 1291 109 39 15 chrX 51450755 51450960 -115199336 - MTB LTR MaLR 0 400 191 6 977 4757 127 4 26 chrX 51450960 51451751 -115198545 - L1_Mm LINE L1 -561 5322 4550 6 977 14019 141 5 13 chrX 51451759 51454267 -115196029 + L1VL1 LINE L1 1172 3659 -2224 6 977 2369 180 0 20 chrX 51454264 51454707 -115195589 + L1VL1 LINE L1 5432 5865 -18 6 977 14197 133 21 7 chrX 51454711 51457041 -115193255 + RMER16-int LTR ERVK 2413 4775 -631 6 977 2350 133 10 32 chrX 51457041 51457445 -115192851 + RMER16 LTR ERVK 1 395 -8 6 977 472 247 72 93 chrX 51457454 51457803 -115192493 + RMER16-int LTR ERVK 2 387 -2927 6 977 3921 144 97 99 chrX 51457813 51458830 -115191466 + RMER16-int LTR ERVK 1071 2085 -5321 6 977 3179 173 20 27 chrX 51458855 51459670 -115190626 + RMER16-int LTR ERVK 1946 3123 -4283 6 977 4081 195 70 52 chrX 51459926 51462213 -115188083 + RMER16-int LTR ERVK 2371 4769 -637 6 977 2240 148 12 32 chrX 51462213 51462624 -115187672 + RLTR9D LTR ERVK 1 403 0 6 977 4081 230 111 85 chrX 51462624 51463238 -115187058 + RMER16-int LTR ERVK 4770 5402 -4 6 977 2871 118 27 4 chrX 51463267 51463717 -115186579 + RMER16 LTR ERVK 72 531 -2 6 977 279 196 0 0 chrX 51463718 51463769 -115186527 + L1M LINE L1 5365 5415 -768 6 977 2608 83 138 97 chrX 51463976 51464432 -115185864 + MT2C_Mm LTR ERVL 1 475 0 6 977 4009 105 3 10 chrX 51464432 51465017 -115185279 + MERVL-int LTR ERVL 1 581 -4904 6 977 3110 97 23 0 chrX 51465006 51465448 -115184848 + MERVL-int LTR ERVL 907 1358 -4127 6 977 291 196 18 0 chrX 51465448 51465504 -115184792 + tRNA-Leu-TTA tRNA tRNA 30 86 0 6 977 901 90 7 22 chrX 51465509 51465645 -115184651 - MT2C_Mm LTR ERVL 0 475 342 6 977 705 172 16 0 chrX 51465901 51466023 -115184273 - B1_Mus1 SINE Alu 0 148 25 6 977 29 60 0 0 chrX 51466260 51466310 -115183986 + AT_rich Low_complexity Low_complexity 1 50 0 6 977 264 303 87 151 chrX 51466362 51466580 -115183716 + B3A SINE B2 2 205 -11 6 977 22 70 0 0 chrX 51466682 51466725 -115183571 + AT_rich Low_complexity Low_complexity 1 43 0 6 977 645 327 58 118 chrX 51467059 51467458 -115182838 + MLT1D LTR MaLR 12 386 -119 6 977 315 0 0 0 chrX 51467488 51467523 -115182773 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 6 977 2415 250 28 0 chrX 51467523 51468059 -115182237 - Lx5 LINE L1 -16 7034 6484 6 977 263 28 28 0 chrX 51468361 51468397 -115181899 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 6 977 5047 105 4 0 chrX 51468469 51469195 -115181101 - L1_Mm LINE L1 -112 5771 5043 6 977 365 24 0 0 chrX 51469193 51469234 -115181062 + L1Md_F2 LINE L1 5547 5587 -296 6 977 6681 101 20 3 chrX 51469237 51470201 -115180095 + L1Md_F2 LINE L1 5591 6570 -12 6 977 318 319 35 35 chrX 51470488 51470631 -115179665 - HAL1 LINE L1 -929 1578 1436 6 977 1936 217 18 25 chrX 51471463 51472050 -115178246 + L1_Mur2 LINE L1 919 1503 -4374 6 977 883 144 7 7 chrX 51472050 51472197 -115178099 + B1_Mus1 SINE Alu 2 148 0 6 977 1936 223 34 81 chrX 51472197 51472602 -115177694 + L1_Mur2 LINE L1 1504 1882 -3995 6 977 3761 224 64 18 chrX 51472617 51473502 -115176794 + Lx5 LINE L1 5829 6754 -296 7 977 10934 174 15 17 chrX 51473758 51475207 -115175089 + L1_Mus1 LINE L1 2104 3532 -2351 7 977 2576 127 7 17 chrX 51475207 51475616 -115174680 - RLTR9E LTR ERVK -4 405 1 7 977 10934 174 15 17 chrX 51475616 51476273 -115174023 + L1_Mus1 LINE L1 3533 4186 -1697 7 977 558 108 0 0 chrX 51476273 51476356 -115173940 + (TA)n Simple_repeat Simple_repeat 2 84 0 7 977 432 37 0 0 chrX 51476356 51476409 -115173887 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 977 10934 174 15 17 chrX 51476409 51476490 -115173806 + L1_Mus1 LINE L1 4187 4287 -1596 7 977 4312 121 170 14 chrX 51476496 51477452 -115172844 + L1_Mus1 LINE L1 5067 6288 -279 7 977 410 231 13 0 chrX 51477454 51477532 -115172764 - B3 SINE B2 -137 79 1 7 977 327 319 75 8 chrX 51477677 51477797 -115172499 - B1F SINE Alu -1 148 21 7 977 386 315 0 0 chrX 51477852 51477960 -115172336 - B3 SINE B2 -11 205 98 7 977 4100 156 21 28 chrX 51478845 51479641 -115170655 - YREP_Mm Unknown Unknown -36 1776 986 7 977 302 311 184 70 chrX 51479646 51479874 -115170422 - L2 LINE L2 -1119 2300 2047 7 977 486 378 39 6 chrX 51480042 51480235 -115170061 + B4A SINE B4 94 288 -4 7 977 6318 90 2 0 chrX 51480776 51481650 -115168646 - L1Md_F2 LINE L1 -366 5517 4642 7 977 3970 71 2 0 chrX 51481651 51482253 -115168043 + L1Md_F2 LINE L1 5501 6103 -479 7 977 1084 257 29 16 chrX 51482253 51482569 -115167727 + RLTR46 LTR ERVK 1 320 0 7 977 280 159 0 22 chrX 51483078 51483123 -115167173 + MMVL30-int LTR ERV1 1320 1363 -2335 7 977 352 192 127 34 chrX 51483563 51483736 -115166560 + MMERVK10C-int LTR ERVK 1171 1301 -6105 7 977 318 96 39 0 chrX 51483799 51483851 -115166445 + MMERVK10C-int LTR ERVK 1727 1780 -5626 7 977 648 174 30 22 chrX 51483871 51484006 -115166290 + MMERVK10C-int LTR ERVK 1924 2059 -5522 7 977 2441 95 179 6 chrX 51484031 51484650 -115165646 + MMERVK10C-int LTR ERVK 2204 2929 -4652 7 977 29862 120 16 19 chrX 51484650 51489183 -115161113 + MMERVK10C-int LTR ERVK 3058 7579 -2 7 977 1181 259 30 13 chrX 51489184 51489485 -115160811 + RLTR46 LTR ERVK 1 306 -14 7 977 3521 68 34 11 chrX 51489498 51489974 -115160322 + L1Md_F2 LINE L1 6096 6582 0 7 977 2619 84 0 3 chrX 51490688 51491034 -115159262 + IAPLTR4 LTR ERVK 1 345 0 7 977 449 244 17 34 chrX 51491034 51491153 -115159143 + IAPLTR3-int LTR ERVK 1 117 -6704 7 977 463 183 8 48 chrX 51491153 51491279 -115159017 + IAPLTR3-int LTR ERVK 834 954 -5867 7 977 338 178 39 92 chrX 51491255 51491385 -115158911 + MMERVK10C-int LTR ERVK 830 952 -6629 7 977 198 0 0 0 chrX 51491566 51491588 -115158708 + (A)n Simple_repeat Simple_repeat 1 22 0 7 977 870 235 116 36 chrX 51491592 51492027 -115158269 + RMER16-int LTR ERVK 316 685 -5452 7 977 458 223 98 0 chrX 51492019 51492131 -115158165 + RMER16-int LTR ERVK 938 1060 -5077 7 977 6590 117 41 4 chrX 51492250 51493394 -115156902 + ETnERV3-int LTR ERVK 2735 3950 -3456 7 977 5002 144 26 72 chrX 51493396 51494421 -115155875 - RLTR13A3 LTR ERVK 0 978 1 7 977 34010 99 21 27 chrX 51494429 51496213 -115154083 - ETnERV3-int LTR ERVK -9 5799 4009 7 977 333 0 0 0 chrX 51496213 51496250 -115154046 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 7 977 34010 100 21 27 chrX 51496250 51499914 -115150382 - ETnERV3-int LTR ERVK -1800 4008 187 7 977 309 161 0 18 chrX 51499914 51499971 -115150325 + RLTR13A3 LTR ERVK 660 715 -263 7 977 985 148 11 21 chrX 51500228 51500414 -115149882 - ETnERV3-int LTR ERVK -5622 186 3 1 977 4738 153 25 81 chrX 51500416 51501452 -115148844 - RLTR13A3 LTR ERVK 0 978 1 1 977 988 204 15 0 chrX 51501454 51501655 -115148641 + ETnERV2-int LTR ERVK 4005 4208 -3198 2 977 339 214 64 44 chrX 51501703 51501816 -115148480 + IAPLTR3-int LTR ERVK 2362 2464 -2380 3 977 714 83 18 9 chrX 51501840 51501949 -115148347 + IAPLTR3-int LTR ERVK 4540 4649 -2932 3 977 1789 208 5 77 chrX 51502084 51502719 -115147577 + IAPLTR3-int LTR ERVK 5098 5745 -1076 3 977 5408 221 2 8 chrX 51503495 51504635 -115145661 + IAPLTR3-int LTR ERVK 5750 7268 -412 3 977 2549 99 0 3 chrX 51504635 51504981 -115145315 + IAPLTR4 LTR ERVK 1 345 0 3 977 561 309 28 0 chrX 51505838 51506016 -115144280 - B4A SINE B4 -38 254 72 4 977 312 185 96 24 chrX 51506266 51506397 -115143899 - RMER4B LTR ERVK -214 252 60 5 977 24 32 0 0 chrX 51506422 51506453 -115143843 + AT_rich Low_complexity Low_complexity 1 31 0 6 977 405 323 73 69 chrX 51506566 51506855 -115143441 + RMER15 LTR ERVL 244 533 -42 7 977 252 0 0 0 chrX 51507344 51507372 -115142924 + (T)n Simple_repeat Simple_repeat 1 28 0 8 977 481 239 69 42 chrX 51507875 51508019 -115142277 + B1_Mur1 SINE Alu 2 149 0 9 977 21 0 0 0 chrX 51508567 51508588 -115141708 + AT_rich Low_complexity Low_complexity 1 21 0 1 977 2210 196 25 75 chrX 51508679 51509209 -115141087 + RMER15 LTR ERVL 3 505 -70 1 977 288 333 54 9 chrX 51509293 51509405 -115140891 - RSINE1 SINE B4 -48 117 1 1 977 672 256 19 38 chrX 51509492 51509650 -115140646 - RSINE1 SINE B4 -1 164 10 1 977 1254 162 24 12 chrX 51510435 51510685 -115139611 - Lx2 LINE L1 -2 6995 6743 1 977 200 86 0 28 chrX 51510823 51510859 -115139437 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 1 977 226 279 47 81 chrX 51510939 51511025 -115139271 - ID_B1 SINE B4 -2 222 140 1 978 489 313 28 32 chrX 51511402 51511620 -115138676 + RLTR45 LTR ERVK 266 482 0 1 978 340 395 0 9 chrX 51511881 51511996 -115138300 - PB1 SINE Alu -2 125 12 1 978 590 201 127 0 chrX 51512151 51512285 -115138011 + ORR1C2 LTR MaLR 232 382 -2 1 978 1744 201 22 3 chrX 51512366 51512721 -115137575 - MERVL_2A-int LTR ERVL -3505 2256 1895 2 978 4468 262 55 47 chrX 51512721 51514678 -115135618 + Lx6 LINE L1 5398 7362 -98 2 978 657 142 0 0 chrX 51514738 51514851 -115135445 + (GA)n Simple_repeat Simple_repeat 1 113 0 2 978 24 0 0 0 chrX 51515235 51515259 -115135037 + AT_rich Low_complexity Low_complexity 1 24 0 2 978 346 250 21 0 chrX 51515984 51516080 -115134216 - RMER19B LTR ERVK -2 900 803 2 978 3286 198 62 42 chrX 51516092 51516964 -115133332 + RMER17D LTR ERVK 1 889 0 2 978 2219 147 41 45 chrX 51517058 51517543 -115132753 + MusHAL1 LINE L1 256 738 -2616 2 978 2491 129 9 9 chrX 51517530 51517976 -115132320 + MusHAL1 LINE L1 1664 2109 -1244 2 978 4192 218 52 36 chrX 51517999 51519186 -115131110 + MYSERV6-int LTR ERVK 2501 3706 -5253 2 978 981 92 35 0 chrX 51519190 51519364 -115130932 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 2 978 2706 196 0 0 chrX 51519365 51519931 -115130365 - L1_Mm LINE L1 -276 5607 5042 2 978 452 217 139 42 chrX 51520110 51520254 -115130042 + RLTR20B1 LTR ERVK 13 170 -393 3 978 602 215 34 11 chrX 51520297 51520476 -115129820 + L1_Mur3 LINE L1 1706 1888 -3992 3 978 3548 226 63 16 chrX 51520486 51521371 -115128925 + Lx5 LINE L1 5828 6754 -296 3 978 22 56 0 0 chrX 51521604 51521640 -115128656 + AT_rich Low_complexity Low_complexity 1 36 0 3 978 442 236 18 0 chrX 51521699 51521809 -115128487 + Lx4A LINE L1 6719 6830 -228 3 978 5361 180 35 18 chrX 51521808 51523132 -115127164 + L1_Mus3 LINE L1 4601 5948 -690 3 978 6126 141 2 11 chrX 51523130 51524256 -115126040 + L1_Mus1 LINE L1 1492 2607 -3276 3 978 1003 191 29 70 chrX 51524273 51524515 -115125781 - RLTR46 LTR ERVK -6 314 83 3 978 676 120 0 0 chrX 51524532 51524640 -115125656 - IAPEY3-int LTR ERVK 0 7581 7474 3 978 2442 58 0 0 chrX 51524665 51524977 -115125319 - RLTR10-int LTR ERVK -190 1797 1486 3 978 2884 160 3 84 chrX 51524979 51525620 -115124676 - IAPEY3-int LTR ERVK -147 7434 6846 3 978 4564 219 8 13 chrX 51525633 51526895 -115123401 - IAPEY3-int LTR ERVK -1882 5699 4417 3 978 3025 272 37 25 chrX 51526892 51527897 -115122399 - IAPEY3-int LTR ERVK -6129 1551 535 3 978 1235 184 37 44 chrX 51528109 51528382 -115121914 - RLTR46 LTR ERVK -8 312 42 4 978 5592 135 9 24 chrX 51528395 51529322 -115120974 + MusHAL1 LINE L1 1411 2335 -377 4 978 2404 139 7 17 chrX 51529322 51529731 -115120565 - RLTR9E LTR ERVK -4 405 1 4 978 5592 135 9 24 chrX 51529731 51529743 -115120553 + MusHAL1 LINE L1 2336 2336 -376 4 978 1887 137 119 34 chrX 51529743 51530181 -115120115 + IAPLTR2_Mm LTR ERVK 1 475 0 4 978 5592 135 9 24 chrX 51530181 51530272 -115120024 + MusHAL1 LINE L1 2336 2426 -286 4 978 462 222 0 0 chrX 51530277 51530376 -115119920 + L1M2 LINE L1 3655 3753 -2390 4 978 2896 8 5 125 chrX 51530377 51530794 -115119502 - IAPLTR1_Mm LTR ERVK 0 367 1 4 978 27864 16 1 0 chrX 51530794 51534063 -115116233 - IAPEz-int LTR ERVK 0 6481 3210 4 978 7287 92 55 72 chrX 51534062 51535390 -115114906 - IAPEz-int LTR ERVK -5168 1313 8 4 978 2896 8 5 125 chrX 51535390 51535807 -115114489 - IAPLTR1_Mm LTR ERVK 0 367 1 4 978 8694 151 11 5 chrX 51535809 51537457 -115112839 + L1_Mus1 LINE L1 3725 5382 -501 3 978 5764 118 9 8 chrX 51537454 51538369 -115111927 + L1_Mus1 LINE L1 5652 6567 0 3 978 480 48 0 0 chrX 51538500 51538563 -115111733 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 978 485 279 70 14 chrX 51538647 51538789 -115111507 + B3 SINE B2 3 152 -64 4 978 245 246 0 90 chrX 51538821 51538888 -115111408 + ID_B1 SINE B4 94 154 -70 4 978 258 364 20 10 chrX 51538878 51538978 -115111318 + B3 SINE B2 107 207 -9 4 978 312 341 42 0 chrX 51539849 51539950 -115110346 - PB1D7 SINE Alu -14 103 1 5 978 207 0 0 0 chrX 51540532 51540555 -115109741 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 978 456 146 9 19 chrX 51540555 51540660 -115109636 + (TA)n Simple_repeat Simple_repeat 2 105 0 5 978 208 147 0 0 chrX 51540824 51540858 -115109438 + (T)n Simple_repeat Simple_repeat 1 34 0 5 978 11852 150 9 3 chrX 51541305 51544234 -115106062 - L1_Mus3 LINE L1 -4 6634 3687 5 978 557 256 102 60 chrX 51544269 51544368 -115105928 + B4A SINE B4 115 222 -70 5 978 978 108 43 0 chrX 51544368 51544507 -115105789 + B1_Mus1 SINE Alu 2 146 -2 5 978 504 0 0 0 chrX 51544507 51544563 -115105733 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 978 315 0 0 0 chrX 51544563 51544597 -115105699 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 978 557 256 102 60 chrX 51544597 51544661 -115105635 + B4A SINE B4 223 285 -7 5 978 785 298 10 31 chrX 51544861 51545055 -115105241 + B3 SINE B2 2 191 -25 5 978 24 0 0 0 chrX 51546087 51546111 -115104185 + AT_rich Low_complexity Low_complexity 1 24 0 6 978 474 18 0 0 chrX 51546407 51546462 -115103834 + (GA)n Simple_repeat Simple_repeat 1 55 0 6 978 26 50 0 0 chrX 51546728 51546768 -115103528 + AT_rich Low_complexity Low_complexity 1 40 0 6 978 23 33 0 0 chrX 51546786 51546816 -115103480 + AT_rich Low_complexity Low_complexity 1 30 0 6 978 21 36 0 0 chrX 51547731 51547759 -115102537 + AT_rich Low_complexity Low_complexity 1 28 0 6 978 4813 154 32 8 chrX 51547761 51548608 -115101688 - Lx LINE L1 -1 6653 5787 6 978 2326 165 24 0 chrX 51548609 51549101 -115101195 - L1_Mur2 LINE L1 -1127 4750 4247 6 978 3317 190 40 48 chrX 51549104 51550518 -115099778 - L1VL2 LINE L1 -2199 1416 22 6 978 567 260 132 6 chrX 51550554 51550728 -115099568 - L1VL2 LINE L1 -6063 272 77 6 978 916 241 19 0 chrX 51551368 51551575 -115098721 - B3 SINE B2 -5 211 1 6 978 304 22 44 0 chrX 51551584 51551629 -115098667 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 7 978 410 314 58 0 chrX 51551760 51551881 -115098415 - B1F SINE Alu -1 148 21 7 978 472 287 0 0 chrX 51551938 51552046 -115098250 - B3 SINE B2 -11 205 98 7 978 4621 8 0 0 chrX 51552517 51553066 -115097230 - L1Md_T LINE L1 0 6582 6073 7 978 4186 149 24 21 chrX 51553460 51554250 -115096046 - YREP_Mm Unknown Unknown -35 1777 986 7 978 376 330 159 40 chrX 51554255 51554482 -115095814 - L2 LINE L2 -1119 2300 2047 7 978 409 343 45 0 chrX 51554692 51554826 -115095470 + B4A SINE B4 131 270 -22 7 978 263 312 67 43 chrX 51555318 51555482 -115094814 - L2 LINE L2 -1758 1661 1494 7 978 1629 32 5 0 chrX 51556844 51557034 -115093262 + B2_Mm1t SINE B2 2 192 -1 7 978 24 0 0 0 chrX 51557049 51557073 -115093223 + AT_rich Low_complexity Low_complexity 1 24 0 7 978 5595 154 3 7 chrX 51557074 51558026 -115092270 - Lx3A LINE L1 -18 6963 6016 7 978 245 346 71 45 chrX 51558481 51558750 -115091546 + RMER17C LTR ERVK 87 362 -48 8 978 287 224 30 0 chrX 51559292 51559359 -115090937 - B4A SINE B4 -39 253 185 8 978 400 193 93 35 chrX 51559701 51559862 -115090434 - RMER4B LTR ERVK -344 241 23 8 978 227 330 0 26 chrX 51560030 51560145 -115090151 + RMER15 LTR ERVL 302 413 -162 8 978 206 86 0 54 chrX 51560163 51560200 -115090096 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 8 978 270 0 0 0 chrX 51560769 51560799 -115089497 + (T)n Simple_repeat Simple_repeat 1 30 0 8 978 628 191 67 22 chrX 51561300 51561434 -115088862 + B1_Mur1 SINE Alu 2 141 -8 8 978 21 36 0 0 chrX 51562035 51562063 -115088233 + AT_rich Low_complexity Low_complexity 1 28 0 8 978 662 255 19 39 chrX 51562304 51562459 -115087837 - RSINE1 SINE B4 -2 163 12 8 978 1092 232 25 0 chrX 51563245 51563486 -115086810 - Lx2 LINE L1 -7 6990 6744 8 978 186 43 0 0 chrX 51563583 51563606 -115086690 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 9 978 21 57 0 0 chrX 51563997 51564032 -115086264 + AT_rich Low_complexity Low_complexity 1 35 0 9 978 9028 62 2 1 chrX 51564071 51565701 -115084595 - L1Md_F3 LINE L1 -257 6327 4695 9 978 5258 66 22 0 chrX 51565699 51566423 -115083873 + L1_Mm LINE L1 3734 4473 -1410 9 978 2487 171 8 10 chrX 51566425 51566922 -115083374 - L1_Mm LINE L1 -3583 2300 1805 9 978 3764 165 16 21 chrX 51566923 51567537 -115082759 - ETnERV2-int LTR ERVK -302 7104 6494 9 978 1117 327 25 22 chrX 51567593 51568146 -115082150 - RNERVK23-int LTR ERVK -417 7800 7246 9 978 365 315 0 20 chrX 51568997 51569143 -115081153 - RLTR6-int LTR ERV1 -1543 6235 6093 9 978 1142 306 55 38 chrX 51569519 51570307 -115079989 - ETnERV2-int LTR ERVK -2477 5740 4586 9 978 2054 301 66 62 chrX 51570302 51571990 -115078306 - ETnERV2-int LTR ERVK -2512 4309 2696 9 978 267 340 18 51 chrX 51574021 51574294 -115076002 - RLTR45-int LTR ERVK -6812 432 169 9 978 606 229 42 0 chrX 51574847 51574965 -115075331 - ETnERV2-int LTR ERVK -214 7192 7070 9 978 3443 135 9 2 chrX 51574968 51575617 -115074679 - L1VL1 LINE L1 -2104 1594 941 1 978 1160 133 17 0 chrX 51575622 51575803 -115074493 - MTB LTR MaLR 0 400 217 1 978 4515 156 2 17 chrX 51575804 51576609 -115073687 - L1_Mm LINE L1 -541 5342 4550 1 978 394 117 7 14 chrX 51576617 51576708 -115073588 + L1Md_F LINE L1 1172 1264 -2651 1 978 243 191 0 0 chrX 51576708 51576771 -115073525 + A-rich Low_complexity Low_complexity 1 63 0 1 978 13491 148 2 16 chrX 51576771 51579213 -115071083 + L1Md_F LINE L1 1252 3659 -2224 1 978 2170 196 28 21 chrX 51579210 51579643 -115070653 + L1_Mm LINE L1 5432 5867 -16 1 978 12064 140 12 16 chrX 51579648 51581699 -115068597 + RMER16-int LTR ERVK 2413 4456 -950 1 978 2698 67 6 3 chrX 51581699 51582043 -115068253 + IAPLTR4 LTR ERVK 1 345 0 1 978 2017 268 62 85 chrX 51582043 51583000 -115067296 + IAPLTR3-int LTR ERVK 1 935 -5886 1 978 1202 228 104 38 chrX 51583249 51583744 -115066552 + RMER16-int LTR ERVK 254 685 -5452 1 978 437 239 88 0 chrX 51583736 51583849 -115066447 + RMER16-int LTR ERVK 938 1060 -5077 1 978 6392 142 95 10 chrX 51583862 51585352 -115064944 + ETnERV3-int LTR ERVK 2454 4271 -3135 1 978 544 187 12 0 chrX 51585354 51585473 -115064823 + ETnERV3-int LTR ERVK 2357 2464 -2380 1 978 807 102 35 48 chrX 51585490 51585635 -115064661 + MMERVK10C-int LTR ERVK 4530 4672 -2909 1 978 5687 261 53 49 chrX 51585742 51588285 -115062011 + ETnERV3-int LTR ERVK 3468 7329 -351 1 978 2623 84 0 3 chrX 51588285 51588631 -115061665 + IAPLTR4 LTR ERVK 1 345 0 1 978 1609 109 0 8 chrX 51588631 51588871 -115061425 + RMER16-int LTR ERVK 4451 4688 -718 1 978 3277 220 61 69 chrX 51588901 51591230 -115059066 + ETnERV2-int LTR ERVK 802 4088 -3318 1 978 10858 92 5 4 chrX 51591242 51593454 -115056842 - L1Md_F2 LINE L1 -2 6580 4368 1 978 5940 112 25 2 chrX 51593454 51594386 -115055910 + L1Md_F2 LINE L1 3361 4313 -1570 1 978 1142 204 86 58 chrX 51594398 51595013 -115055283 + ETnERV2-int LTR ERVK 4616 4995 -2249 1 978 321 313 61 80 chrX 51595013 51595339 -115054957 - RLTR46 LTR ERVK 0 320 1 1 978 1607 201 5 49 chrX 51595341 51595729 -115054567 + ETnERV2-int LTR ERVK 2723 3093 -1751 1 978 596 205 40 20 chrX 51595728 51595877 -115054419 + ETnERV2-int LTR ERVK 6096 6247 -1159 1 978 1189 175 20 0 chrX 51595911 51596111 -115054185 + ETnERV2-int LTR ERVK 6222 6425 -981 1 978 354 153 27 14 chrX 51596323 51596396 -115053900 + ETnERV2-int LTR ERVK 7331 7404 -2 1 978 2252 148 10 35 chrX 51596397 51596802 -115053494 + RLTR9D LTR ERVK 1 395 -8 1 978 3716 136 43 0 chrX 51596808 51597117 -115053179 + RMER16-int LTR ERVK 4769 5082 -324 1 978 468 0 0 0 chrX 51597117 51597169 -115053127 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 978 3716 136 43 0 chrX 51597169 51597470 -115052826 + RMER16-int LTR ERVK 5083 5404 -2 1 978 2821 147 18 4 chrX 51597472 51597953 -115052343 + RMER16 LTR ERVK 1 532 -1 1 978 250 208 0 0 chrX 51597954 51598007 -115052289 + L1M LINE L1 5366 5418 -879 1 978 2353 101 151 98 chrX 51598211 51598662 -115051634 + MT2C_Mm LTR ERVL 1 475 0 1 978 3467 117 14 0 chrX 51598662 51599173 -115051123 + MERVL-int LTR ERVL 1 518 -4967 1 978 308 121 17 0 chrX 51599176 51599234 -115051062 + L1_Mus2 LINE L1 6508 6566 0 1 978 241 335 56 34 chrX 51599263 51599532 -115050764 + Lx9 LINE L1 7247 7521 -123 1 978 350 338 73 6 chrX 51599532 51599696 -115050600 - HAL1 LINE L1 -929 1578 1404 1 978 1695 219 28 3 chrX 51600494 51601083 -115049213 + L1_Mur2 LINE L1 907 1514 -4363 1 978 945 114 7 7 chrX 51601084 51601225 -115049071 + B1_Mus1 SINE Alu 2 142 -6 1 978 1048 245 36 26 chrX 51601257 51601642 -115048654 + L1_Mur2 LINE L1 1497 1885 -3995 1 978 1242 198 41 2 chrX 51601656 51601917 -115048379 + Lx5 LINE L1 5826 6098 -1598 1 978 6957 32 6 0 chrX 51601948 51602765 -115047531 - RLTR13B2 LTR ERVK 0 822 1 1 978 34034 105 36 30 chrX 51602779 51604482 -115045814 - ETnERV3-int LTR ERVK -28 5780 4010 1 978 240 35 0 0 chrX 51604482 51604511 -115045785 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1 978 34034 138 34 29 chrX 51604511 51608953 -115041343 - ETnERV3-int LTR ERVK -1799 4009 188 1 978 307 277 0 0 chrX 51609192 51609293 -115041003 - ETnERV3-int LTR ERVK -6874 379 279 1 978 1077 106 21 32 chrX 51609365 51609551 -115040745 - ETnERV3-int LTR ERVK -5622 186 3 1 978 6594 52 7 0 chrX 51609553 51610369 -115039927 - RLTR13B2 LTR ERVK 0 822 1 1 978 2556 227 25 18 chrX 51610369 51610975 -115039321 + Lx4B LINE L1 6169 6778 -280 1 978 21 57 0 0 chrX 51610975 51611010 -115039286 + AT_rich Low_complexity Low_complexity 1 35 0 1 978 17178 139 8 7 chrX 51611228 51612668 -115037628 + L1_Mus1 LINE L1 2101 3537 -377 1 978 2479 139 7 17 chrX 51612668 51613077 -115037219 - RLTR9E LTR ERVK -4 405 1 1 978 17178 166 13 9 chrX 51613077 51614904 -115035392 + L1_Mus1 LINE L1 3529 5382 -501 1 978 4005 109 5 17 chrX 51614901 51615499 -115034797 + L1_Mus1 LINE L1 5652 6242 -325 1 978 417 285 40 24 chrX 51615499 51615625 -115034671 - B3 SINE B2 -88 128 1 1 978 313 358 67 0 chrX 51615769 51615889 -115034407 - B1F SINE Alu -1 148 21 1 978 457 287 0 0 chrX 51615944 51616052 -115034244 - B3 SINE B2 -11 205 98 1 978 4097 147 28 24 chrX 51616938 51617726 -115032570 - YREP_Mm Unknown Unknown -36 1776 986 1 978 298 335 171 43 chrX 51617771 51617958 -115032338 - L2 LINE L2 -1162 2257 2047 1 978 468 358 46 7 chrX 51618167 51618319 -115031977 + B4A SINE B4 131 288 -4 1 978 6125 103 0 7 chrX 51618852 51619748 -115030548 - L1Md_F2 LINE L1 -366 5517 4628 1 978 589 129 0 0 chrX 51619736 51619821 -115030475 + L1Md_F2 LINE L1 5502 5586 -297 1 978 7517 58 18 2 chrX 51619821 51620801 -115029495 + L1Md_F2 LINE L1 5587 6582 0 1 978 2610 79 6 3 chrX 51621499 51621843 -115028453 + IAPLTR4 LTR ERVK 1 345 0 1 978 364 277 9 38 chrX 51621857 51621962 -115028334 + IAPLTR3-int LTR ERVK 16 117 -6704 1 978 517 131 9 70 chrX 51621962 51622077 -115028219 + IAPLTR3-int LTR ERVK 834 941 -5880 1 978 353 186 0 92 chrX 51622066 51622196 -115028100 + IAPLTR3-int LTR ERVK 835 952 -6629 1 978 1135 206 94 63 chrX 51622318 51622397 -115027899 + ETnERV3-int LTR ERVK 251 326 -5080 1 978 387 0 0 0 chrX 51622397 51622440 -115027856 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 978 1135 225 95 61 chrX 51622440 51622860 -115027436 + ETnERV3-int LTR ERVK 327 667 -5470 1 978 457 183 92 0 chrX 51622859 51622979 -115027317 + ETnERV3-int LTR ERVK 1719 1849 -5557 1 978 1044 205 130 49 chrX 51623036 51623343 -115026953 - IAPEY3_LTR LTR ERVK 0 332 1 1 978 6588 118 17 9 chrX 51623411 51624561 -115025735 + ETnERV3-int LTR ERVK 2735 3950 -3456 1 978 4997 141 27 73 chrX 51624563 51625588 -115024708 - RLTR13A3 LTR ERVK 0 978 1 1 978 34735 102 14 25 chrX 51625596 51631177 -115019119 - ETnERV3-int LTR ERVK -9 5799 186 1 978 971 170 11 21 chrX 51631340 51631526 -115018770 - ETnERV3-int LTR ERVK -5622 186 3 1 978 4811 151 27 73 chrX 51631528 51632553 -115017743 - RLTR13A3 LTR ERVK 0 978 1 1 978 1057 204 15 0 chrX 51632555 51632756 -115017540 + IAPLTR3-int LTR ERVK 4005 4208 -3198 1 978 362 247 9 33 chrX 51632793 51632923 -115017373 + IAPLTR3-int LTR ERVK 2357 2464 -2380 1 978 735 102 55 8 chrX 51632930 51633058 -115017238 + MMERVK10C-int LTR ERVK 4528 4661 -2920 1 978 5656 268 49 45 chrX 51633182 51635730 -115014566 + IAPLTR3-int LTR ERVK 3468 7329 -351 1 978 2461 89 27 3 chrX 51635730 51636067 -115014229 + IAPLTR4 LTR ERVK 1 345 0 1 978 531 316 34 0 chrX 51636922 51637099 -115013197 - B4A SINE B4 -38 254 72 1 978 324 162 24 36 chrX 51637426 51637469 -115012827 - RMER4B LTR ERVK -471 114 72 1 978 261 0 0 0 chrX 51637469 51637498 -115012798 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 978 324 162 24 36 chrX 51637498 51637537 -115012759 - RMER4B LTR ERVK -514 71 35 1 978 364 310 69 65 chrX 51637719 51637950 -115012346 + RMER15 LTR ERVL 302 533 -42 1 978 515 225 69 42 chrX 51638960 51639104 -115011192 + B1_Mur1 SINE Alu 2 149 0 1 978 21 0 0 0 chrX 51639652 51639673 -115010623 + AT_rich Low_complexity Low_complexity 1 21 0 1 978 2153 199 28 78 chrX 51639764 51640293 -115010003 + RMER15 LTR ERVL 3 505 -70 1 978 659 263 19 38 chrX 51640576 51640734 -115009562 - RSINE1 SINE B4 -1 164 10 1 978 180 0 0 0 chrX 51640937 51640957 -115009339 + (T)n Simple_repeat Simple_repeat 1 20 0 1 978 1240 162 24 12 chrX 51641530 51641780 -115008516 - Lx2 LINE L1 -2 6995 6743 1 978 200 86 0 28 chrX 51641918 51641954 -115008342 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 1 979 481 313 28 32 chrX 51642496 51642714 -115007582 + RLTR45 LTR ERVK 266 482 0 1 979 343 395 0 9 chrX 51642975 51643090 -115007206 - PB1 SINE Alu -2 125 12 1 979 655 207 79 0 chrX 51643246 51643386 -115006910 + ORR1C2 LTR MaLR 232 382 -2 1 979 1842 203 22 3 chrX 51643467 51643822 -115006474 - MERVL_2A-int LTR ERVL -3505 2256 1895 1 979 4859 263 54 49 chrX 51643822 51645781 -115004515 + Lx6 LINE L1 5398 7362 -98 1 979 864 133 0 0 chrX 51645841 51645984 -115004312 + (GA)n Simple_repeat Simple_repeat 1 143 0 1 979 24 0 0 0 chrX 51646364 51646388 -115003908 + AT_rich Low_complexity Low_complexity 1 24 0 1 979 234 266 42 21 chrX 51647113 51647209 -115003087 - RMER19B LTR ERVK -2 900 803 1 979 3146 195 61 43 chrX 51647221 51648095 -115002201 + RMER17D LTR ERVK 1 889 0 1 979 2384 149 37 45 chrX 51648189 51648675 -115001621 + L1VL4 LINE L1 462 943 -5359 1 979 2560 138 9 5 chrX 51648662 51649107 -115001189 + MusHAL1 LINE L1 1023 1469 -1243 1 979 827 216 0 6 chrX 51649129 51649306 -115000990 + MYSERV6-int LTR ERVK 2501 2676 -6283 1 979 8816 14 0 0 chrX 51649308 51650304 -114999992 + L1Md_A LINE L1 5587 6582 0 1 979 529 149 11 0 chrX 51650310 51650404 -114999892 + L1_Mus1 LINE L1 5288 5382 -501 1 979 6079 119 8 7 chrX 51650401 51651316 -114998980 + L1_Mus1 LINE L1 5652 6567 0 1 979 480 72 0 0 chrX 51651447 51651516 -114998780 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 979 470 286 70 14 chrX 51651600 51651742 -114998554 + B3 SINE B2 3 152 -64 1 979 236 246 0 90 chrX 51651774 51651841 -114998455 + ID_B1 SINE B4 94 154 -70 1 979 243 374 20 10 chrX 51651831 51651931 -114998365 + B3 SINE B2 107 207 -9 1 979 244 372 10 0 chrX 51652806 51652908 -114997388 - PB1D10 SINE Alu -14 103 1 1 979 353 118 0 0 chrX 51653483 51653534 -114996762 + HAL1-3A_ME LINE L1 1968 2018 -840 1 979 375 178 10 19 chrX 51653537 51653640 -114996656 + (TA)n Simple_repeat Simple_repeat 2 103 0 1 979 208 147 0 0 chrX 51653804 51653838 -114996458 + (T)n Simple_repeat Simple_repeat 1 34 0 1 979 12642 148 8 4 chrX 51654285 51657222 -114993074 - L1_Mus3 LINE L1 -3 6635 3687 1 979 510 263 102 66 chrX 51657257 51657356 -114992940 + B4A SINE B4 115 222 -70 1 979 1016 97 0 52 chrX 51657356 51657509 -114992787 + B1_Mus1 SINE Alu 2 146 -2 1 979 531 0 0 0 chrX 51657509 51657568 -114992728 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 979 312 27 0 0 chrX 51657569 51657606 -114992690 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 979 510 263 102 66 chrX 51657606 51657670 -114992626 + B4A SINE B4 223 286 -6 1 979 831 293 0 0 chrX 51657870 51658051 -114992245 + B3 SINE B2 2 182 -34 1 979 24 0 0 0 chrX 51659109 51659133 -114991163 + AT_rich Low_complexity Low_complexity 1 24 0 1 979 510 17 0 0 chrX 51659429 51659488 -114990808 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 979 26 50 0 0 chrX 51659753 51659793 -114990503 + AT_rich Low_complexity Low_complexity 1 40 0 1 979 23 33 0 0 chrX 51659811 51659841 -114990455 + AT_rich Low_complexity Low_complexity 1 30 0 1 979 21 36 0 0 chrX 51660756 51660784 -114989512 + AT_rich Low_complexity Low_complexity 1 28 0 1 979 4692 156 33 8 chrX 51660786 51661632 -114988664 - Lx LINE L1 -1 6653 5787 1 979 2550 161 24 0 chrX 51661633 51662125 -114988171 - L1_Mur2 LINE L1 -1127 4750 4247 1 979 3554 193 38 53 chrX 51662128 51663573 -114986723 - L1VL2 LINE L1 -2199 1416 2 1 979 586 283 132 6 chrX 51663579 51663753 -114986543 - L1VL2 LINE L1 -6063 272 77 1 979 580 331 84 19 chrX 51663888 51664150 -114986146 - B4A SINE B4 -3 289 11 1 979 921 241 19 0 chrX 51664390 51664597 -114985699 - B3 SINE B2 -5 211 1 1 979 275 49 0 24 chrX 51664606 51664648 -114985648 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1 979 395 314 58 0 chrX 51664780 51664901 -114985395 - B1F SINE Alu -1 148 21 1 979 455 287 0 0 chrX 51664959 51665067 -114985229 - B3 SINE B2 -11 205 98 1 979 3645 154 23 25 chrX 51665923 51666614 -114983682 - YREP_Mm Unknown Unknown -35 1777 1088 1 979 578 61 0 0 chrX 51666745 51666827 -114983469 - YREP_Mm Unknown Unknown -745 1067 986 1 979 328 311 186 62 chrX 51666832 51667058 -114983238 - L2 LINE L2 -1119 2300 2047 2 979 438 351 45 0 chrX 51667267 51667401 -114982895 + B4A SINE B4 131 270 -22 2 979 277 312 49 24 chrX 51667893 51668057 -114982239 - L2 LINE L2 -1758 1661 1494 2 979 5661 151 3 12 chrX 51669397 51670365 -114979931 - Lx3A LINE L1 -7 6974 6016 2 979 29706 7 0 0 chrX 51670706 51674086 -114976210 + L1Md_A LINE L1 2207 5586 -297 2 979 8896 8 0 0 chrX 51674086 51675079 -114975217 + L1Md_A LINE L1 5587 6579 -3 2 979 245 328 77 36 chrX 51675220 51675467 -114974829 + RMER17C LTR ERVK 87 343 -67 2 979 289 235 29 0 chrX 51676027 51676095 -114974201 - B4A SINE B4 -38 254 185 2 979 355 187 95 38 chrX 51676436 51676594 -114973702 - RMER4B LTR ERVK -344 241 26 2 979 233 330 0 26 chrX 51676766 51676881 -114973415 + RMER15 LTR ERVL 302 413 -162 2 979 219 146 0 0 chrX 51676900 51676941 -114973355 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2 979 615 198 67 22 chrX 51678023 51678157 -114972139 + B1_Mur1 SINE Alu 2 141 -8 2 979 537 192 9 9 chrX 51678837 51678942 -114971354 + RMER15 LTR ERVL 1 105 -470 2 979 2318 190 8 46 chrX 51678927 51679407 -114970889 + RMER15 LTR ERVL 47 508 -67 2 979 250 342 54 9 chrX 51679488 51679600 -114970696 - RSINE1 SINE B4 -48 117 1 2 979 646 262 19 39 chrX 51679688 51679843 -114970453 - RSINE1 SINE B4 -2 163 12 2 979 9201 58 3 1 chrX 51680252 51681708 -114968588 - L1Md_F3 LINE L1 -431 6153 4695 2 979 5437 65 16 0 chrX 51681706 51682448 -114967848 + L1_Mm LINE L1 3734 4487 -1396 2 979 2443 175 8 10 chrX 51682444 51682941 -114967355 - L1_Mm LINE L1 -3583 2300 1805 2 979 3764 163 16 21 chrX 51682942 51683556 -114966740 - ETnERV2-int LTR ERVK -302 7104 6494 2 979 1164 325 25 21 chrX 51683608 51684165 -114966131 - RNERVK23-int LTR ERVK -413 7804 7246 2 979 311 277 0 0 chrX 51685016 51685099 -114965197 - RLTR6-int LTR ERV1 -1543 6235 6153 2 979 425 265 15 36 chrX 51685025 51685162 -114965134 - RNERVK23-int LTR ERVK -1889 6328 6195 2 979 1233 304 48 41 chrX 51685538 51686326 -114963970 - RNERVK23-int LTR ERVK -2513 5704 4586 2 979 2174 299 60 53 chrX 51686321 51688030 -114962266 - RNERVK23-int LTR ERVK -2512 4309 2696 2 979 277 306 30 43 chrX 51690169 51690333 -114959963 - RLTR45-int LTR ERVK -6914 330 169 2 979 3427 133 7 1 chrX 51691007 51691650 -114958646 - L1VL1 LINE L1 -2104 1594 947 2 979 1205 116 17 0 chrX 51691660 51691841 -114958455 - MTB LTR MaLR 0 400 217 2 979 4616 150 2 17 chrX 51691842 51692647 -114957649 - L1_Mm LINE L1 -541 5342 4550 2 979 399 81 0 16 chrX 51692655 51692718 -114957578 + L1Md_F LINE L1 1172 1233 -5383 2 979 186 156 0 0 chrX 51692718 51692763 -114957533 + A-rich Low_complexity Low_complexity 1 45 0 2 979 13498 150 2 15 chrX 51692772 51695244 -114955052 + L1Md_F LINE L1 1220 3659 -2224 2 979 2170 196 28 21 chrX 51695241 51695674 -114954622 + L1Md_F LINE L1 5432 5867 -16 2 979 12092 140 11 17 chrX 51695679 51697732 -114952564 + RMER16-int LTR ERVK 2413 4453 -953 2 979 2735 56 9 3 chrX 51697732 51698075 -114952221 + IAPLTR4 LTR ERVK 1 345 0 2 979 820 217 5 36 chrX 51698075 51698271 -114952025 + IAPLTR3-int LTR ERVK 1 190 -6631 2 979 421 287 21 14 chrX 51698303 51698448 -114951848 + IAPLTR3-int LTR ERVK 337 482 -6339 2 979 969 202 7 107 chrX 51698498 51698889 -114951407 + IAPLTR3-int LTR ERVK 689 954 -5867 2 979 1208 230 103 34 chrX 51699007 51699502 -114950794 + RMER16-int LTR ERVK 254 685 -5452 2 979 452 230 88 0 chrX 51699494 51699607 -114950689 + RMER16-int LTR ERVK 938 1060 -5077 2 979 342 256 0 55 chrX 51699620 51699711 -114950585 + ETnERV3-int LTR ERVK 2454 2539 -4867 2 979 6589 112 19 15 chrX 51699724 51700881 -114949415 + ETnERV3-int LTR ERVK 2736 3950 -3456 2 979 4910 146 27 72 chrX 51700883 51701907 -114948389 - RLTR13A3 LTR ERVK 0 978 1 2 979 34158 97 23 25 chrX 51701915 51703701 -114946595 - ETnERV3-int LTR ERVK -9 5799 4011 2 979 378 0 0 0 chrX 51703701 51703743 -114946553 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 2 979 34158 106 22 24 chrX 51703743 51707490 -114942806 - ETnERV3-int LTR ERVK -1798 4010 186 2 979 992 144 16 32 chrX 51707654 51707841 -114942455 - ETnERV3-int LTR ERVK -5622 186 3 2 979 4801 152 27 72 chrX 51707843 51708867 -114941429 - RLTR13A3 LTR ERVK 0 978 1 2 979 1047 204 15 0 chrX 51708869 51709070 -114941226 + IAPLTR3-int LTR ERVK 4005 4208 -3198 2 979 386 238 11 35 chrX 51709107 51709237 -114941059 + IAPLTR3-int LTR ERVK 2357 2464 -2380 2 979 784 102 47 8 chrX 51709244 51709373 -114940923 + MMERVK10C-int LTR ERVK 4528 4661 -2920 2 979 5821 269 48 45 chrX 51709497 51712047 -114938249 + IAPLTR3-int LTR ERVK 3468 7324 -356 2 979 2461 89 27 3 chrX 51712047 51712384 -114937912 + IAPLTR4 LTR ERVK 1 345 0 2 979 526 320 28 0 chrX 51713239 51713417 -114936879 - B4A SINE B4 -38 254 72 2 979 324 162 24 36 chrX 51713744 51713787 -114936509 - RMER4B LTR ERVK -471 114 72 2 979 261 0 0 0 chrX 51713787 51713816 -114936480 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 979 324 162 24 36 chrX 51713816 51713855 -114936441 - RMER4B LTR ERVK -514 71 35 2 979 354 320 56 64 chrX 51714039 51714273 -114936023 + RMER15 LTR ERVL 302 533 -42 2 979 515 225 69 42 chrX 51715276 51715420 -114934876 + B1_Mur1 SINE Alu 2 149 0 2 979 21 0 0 0 chrX 51715968 51715989 -114934307 + AT_rich Low_complexity Low_complexity 1 21 0 2 979 2108 203 28 78 chrX 51716080 51716609 -114933687 + RMER15 LTR ERVL 3 505 -70 2 979 659 263 19 38 chrX 51716892 51717050 -114933246 - RSINE1 SINE B4 -1 164 10 2 979 1215 166 24 20 chrX 51717837 51718089 -114932207 - Lx2 LINE L1 -2 6995 6743 2 979 200 86 0 28 chrX 51718227 51718263 -114932033 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 2 979 481 313 28 32 chrX 51718805 51719023 -114931273 + RLTR45 LTR ERVK 266 482 0 2 979 343 395 0 9 chrX 51719284 51719399 -114930897 - PB1 SINE Alu -2 125 12 2 979 655 207 79 0 chrX 51719554 51719694 -114930602 + ORR1C2 LTR MaLR 232 382 -2 2 979 1842 203 22 3 chrX 51719775 51720130 -114930166 - MERVL_2A-int LTR ERVL -3505 2256 1895 2 979 4818 266 53 48 chrX 51720130 51722089 -114928207 + Lx6 LINE L1 5398 7362 -98 2 979 1050 107 0 0 chrX 51722149 51722308 -114927988 + (GA)n Simple_repeat Simple_repeat 1 159 0 2 979 24 0 0 0 chrX 51722688 51722712 -114927584 + AT_rich Low_complexity Low_complexity 1 24 0 2 979 256 266 42 11 chrX 51723437 51723532 -114926764 - RMER19B LTR ERVK -2 900 803 2 979 3168 195 61 43 chrX 51723544 51724418 -114925878 + RMER17D LTR ERVK 1 889 0 2 979 2234 149 37 45 chrX 51724512 51724998 -114925298 + L1VL4 LINE L1 462 943 -5359 2 979 2420 138 9 5 chrX 51724985 51725430 -114924866 + MusHAL1 LINE L1 1023 1469 -1243 2 979 4029 216 52 47 chrX 51725452 51725631 -114924665 + MYSERV6-int LTR ERVK 2501 2676 -6283 2 979 8823 15 0 0 chrX 51725631 51726626 -114923670 + L1Md_A LINE L1 5587 6581 -1 2 979 4029 216 52 47 chrX 51726626 51727645 -114922651 + MYSERV6-int LTR ERVK 2677 3706 -5253 2 979 1121 83 18 0 chrX 51727647 51727864 -114922432 + (TCTA)n Simple_repeat Simple_repeat 1 220 0 2 979 2614 205 11 0 chrX 51727864 51728434 -114921862 - L1_Mm LINE L1 -276 5607 5032 2 979 452 217 139 42 chrX 51728603 51728747 -114921549 + RLTR20B1 LTR ERVK 13 170 -393 2 979 567 226 34 11 chrX 51728791 51728970 -114921326 + L1_Mur3 LINE L1 1706 1888 -3992 2 979 3404 233 63 16 chrX 51728980 51729865 -114920431 + Lx5 LINE L1 5828 6754 -296 2 979 23 54 0 0 chrX 51730098 51730135 -114920161 + AT_rich Low_complexity Low_complexity 1 37 0 2 979 427 246 18 0 chrX 51730194 51730304 -114919992 + Lx4A LINE L1 6719 6830 -228 2 979 5313 177 34 20 chrX 51730303 51731634 -114918662 + L1_Mus3 LINE L1 4601 5948 -690 2 979 5927 145 6 5 chrX 51731642 51732747 -114917549 + L1_Mus1 LINE L1 1502 2607 -3276 2 979 997 179 37 78 chrX 51732764 51733006 -114917290 - RLTR46 LTR ERVK -6 314 83 2 979 667 92 37 0 chrX 51733023 51733132 -114917164 - IAPEY3-int LTR ERVK 0 7680 7568 2 979 2375 67 0 3 chrX 51733156 51733469 -114916827 - RLTR10-int LTR ERVK -190 1797 1486 2 979 2786 170 3 84 chrX 51733471 51734112 -114916184 - IAPEY3-int LTR ERVK -147 7434 6846 2 979 4633 218 9 15 chrX 51734125 51735389 -114914907 - IAPEY3-int LTR ERVK -1882 5699 4417 2 979 2867 277 46 20 chrX 51735386 51736377 -114913919 - IAPEY3-int LTR ERVK -6129 1551 535 2 979 1318 179 33 44 chrX 51736594 51736868 -114913428 - RLTR46 LTR ERVK -8 312 42 2 979 13467 156 28 20 chrX 51736881 51737808 -114912488 + L1_Mus1 LINE L1 2615 3532 -2351 2 979 2394 142 7 17 chrX 51737808 51738217 -114912079 - RLTR9E LTR ERVK -4 405 1 2 979 13467 156 28 20 chrX 51738217 51738229 -114912067 + L1_Mus1 LINE L1 3533 3533 -2350 2 979 1970 126 142 33 chrX 51738229 51738657 -114911639 + IAPLTR2_Mm LTR ERVK 1 475 0 2 979 13467 156 28 20 chrX 51738657 51740361 -114909935 + L1_Mus1 LINE L1 3533 5292 -591 2 979 8858 9 0 0 chrX 51740361 51741348 -114908948 + L1Md_A LINE L1 5596 6582 0 2 979 13467 156 28 20 chrX 51741348 51741450 -114908846 + L1_Mus1 LINE L1 5293 5382 -501 2 979 5790 117 8 7 chrX 51741447 51742362 -114907934 + L1_Mus1 LINE L1 5652 6567 0 2 979 426 79 0 0 chrX 51742493 51742556 -114907740 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 979 492 279 70 14 chrX 51742640 51742782 -114907514 + B3 SINE B2 3 152 -64 2 979 239 246 0 90 chrX 51742814 51742881 -114907415 + ID_B1 SINE B4 94 154 -70 2 979 237 374 20 10 chrX 51742871 51742971 -114907325 + B3 SINE B2 107 207 -9 2 979 240 372 10 0 chrX 51743846 51743948 -114906348 - PB1D10 SINE Alu -14 103 1 2 979 211 267 227 0 chrX 51743959 51744034 -114906262 - B1F SINE Alu 0 149 58 2 979 354 136 17 0 chrX 51744523 51744582 -114905714 + HAL1-3A_ME LINE L1 1968 2027 -831 2 979 366 180 10 20 chrX 51744582 51744684 -114905612 + (TA)n Simple_repeat Simple_repeat 2 102 0 2 979 208 147 0 0 chrX 51744848 51744882 -114905414 + (T)n Simple_repeat Simple_repeat 1 34 0 2 979 11843 150 8 4 chrX 51745329 51748265 -114902031 - L1_Mus3 LINE L1 -3 6635 3687 2 979 506 263 101 77 chrX 51748300 51748399 -114901897 + B4A SINE B4 115 222 -70 2 979 1027 97 0 52 chrX 51748399 51748552 -114901744 + B1_Mus1 SINE Alu 2 146 -2 2 979 531 0 0 0 chrX 51748552 51748611 -114901685 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 979 345 47 0 0 chrX 51748614 51748657 -114901639 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 979 506 263 101 77 chrX 51748657 51748721 -114901575 + B4A SINE B4 223 286 -6 2 979 836 293 0 0 chrX 51748921 51749102 -114901194 + B3 SINE B2 2 182 -34 2 979 215 286 134 60 chrX 51750025 51750159 -114900137 - B1F SINE Alu -2 147 4 2 979 24 0 0 0 chrX 51750160 51750184 -114900112 + AT_rich Low_complexity Low_complexity 1 24 0 2 979 654 13 0 0 chrX 51750480 51750555 -114899741 + (GA)n Simple_repeat Simple_repeat 1 75 0 2 979 26 50 0 0 chrX 51750820 51750860 -114899436 + AT_rich Low_complexity Low_complexity 1 40 0 2 979 23 33 0 0 chrX 51750878 51750908 -114899388 + AT_rich Low_complexity Low_complexity 1 30 0 2 979 21 36 0 0 chrX 51751823 51751851 -114898445 + AT_rich Low_complexity Low_complexity 1 28 0 2 979 4699 156 33 8 chrX 51751853 51752699 -114897597 - Lx LINE L1 -1 6653 5787 2 979 2393 161 24 0 chrX 51752700 51753192 -114897104 - L1_Mur2 LINE L1 -1127 4750 4247 2 979 3245 196 35 49 chrX 51753195 51754613 -114895683 - L1VL2 LINE L1 -2199 1416 22 2 979 533 276 141 0 chrX 51754660 51754823 -114895473 - L1VL2 LINE L1 -6073 262 77 2 979 588 331 84 19 chrX 51754958 51755220 -114895076 - B4A SINE B4 -3 289 11 2 979 921 241 19 0 chrX 51755460 51755667 -114894629 - B3 SINE B2 -5 211 1 2 979 275 49 0 24 chrX 51755676 51755718 -114894578 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 2 979 397 314 58 0 chrX 51755850 51755971 -114894325 - B1F SINE Alu -1 148 21 3 979 455 287 0 0 chrX 51756029 51756137 -114894159 - B3 SINE B2 -11 205 98 3 979 3628 154 23 25 chrX 51756993 51757684 -114892612 - YREP_Mm Unknown Unknown -35 1777 1088 3 979 572 61 0 0 chrX 51757815 51757897 -114892399 - YREP_Mm Unknown Unknown -745 1067 986 3 979 342 347 154 35 chrX 51757902 51758129 -114892167 - L2 LINE L2 -1119 2300 2047 3 979 445 351 45 0 chrX 51758338 51758472 -114891824 + B4A SINE B4 131 270 -22 3 979 286 312 49 24 chrX 51758967 51759131 -114891165 - L2 LINE L2 -1758 1661 1494 3 979 5714 151 3 11 chrX 51760471 51761438 -114888858 - Lx3A LINE L1 -7 6974 6016 3 979 28336 7 2 0 chrX 51761779 51765151 -114885145 + L1Md_A LINE L1 2207 5586 -297 3 979 8938 8 0 0 chrX 51765151 51766144 -114884152 + L1Md_A LINE L1 5587 6579 -3 3 979 259 328 77 36 chrX 51766285 51766532 -114883764 + RMER17C LTR ERVK 87 343 -67 3 979 289 235 29 0 chrX 51767092 51767160 -114883136 - B4A SINE B4 -38 254 185 3 979 355 184 96 71 chrX 51767501 51767658 -114882638 - RMER4B LTR ERVK -344 241 33 3 979 241 330 0 26 chrX 51767840 51767955 -114882341 + RMER15 LTR ERVL 302 413 -162 3 979 219 146 0 0 chrX 51767975 51768016 -114882280 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 3 979 621 198 67 22 chrX 51769099 51769233 -114881063 + B1_Mur1 SINE Alu 2 141 -8 3 979 540 192 9 9 chrX 51769913 51770018 -114880278 + RMER15 LTR ERVL 1 105 -470 3 979 2330 192 8 46 chrX 51770003 51770483 -114879813 + RMER15 LTR ERVL 47 508 -67 3 979 257 342 54 9 chrX 51770564 51770676 -114879620 - RSINE1 SINE B4 -48 117 1 3 979 651 262 19 39 chrX 51770764 51770919 -114879377 - RSINE1 SINE B4 -2 163 12 3 979 8773 58 3 1 chrX 51771328 51772784 -114877512 - L1Md_F3 LINE L1 -431 6153 4695 3 122 5186 65 16 0 chrX 51772782 51773524 -114876772 + L1_Mm LINE L1 3734 4487 -1396 3 980 2304 173 8 10 chrX 51773520 51774017 -114876279 - L1_Mm LINE L1 -3583 2300 1805 3 980 3569 161 16 21 chrX 51774018 51774632 -114875664 - ETnERV2-int LTR ERVK -302 7104 6494 3 980 1026 297 18 18 chrX 51774684 51775078 -114875218 - RNERVK23-int LTR ERVK -413 7804 7411 3 980 287 277 0 0 chrX 51776092 51776175 -114874121 - RLTR6-int LTR ERV1 -1543 6235 6153 3 980 382 262 15 37 chrX 51776103 51776238 -114874058 - RNERVK23-int LTR ERVK -1891 6326 6195 3 980 1047 304 48 41 chrX 51776614 51777402 -114872894 - RNERVK23-int LTR ERVK -2513 5704 4586 3 980 2160 300 60 53 chrX 51777397 51779106 -114871190 - RNERVK23-int LTR ERVK -2512 4309 2696 3 980 277 306 30 43 chrX 51781245 51781409 -114868887 - RLTR45-int LTR ERVK -6914 330 169 3 980 3402 136 9 2 chrX 51782083 51782726 -114867570 - L1VL1 LINE L1 -2104 1594 947 3 980 1205 116 17 0 chrX 51782736 51782917 -114867379 - MTB LTR MaLR 0 400 217 3 980 4535 153 4 15 chrX 51782918 51783720 -114866576 - L1_Mm LINE L1 -541 5342 4550 3 980 399 132 4 29 chrX 51783728 51783837 -114866459 + L1Md_F LINE L1 1172 1277 -2638 3 980 13484 151 2 15 chrX 51783842 51786312 -114863984 + L1Md_F LINE L1 1220 3659 -2224 3 980 2148 198 28 21 chrX 51786309 51786742 -114863554 + L1Md_F LINE L1 5432 5867 -16 3 980 12020 139 11 24 chrX 51786747 51788816 -114861480 + RMER16-int LTR ERVK 2413 4453 -953 3 980 2724 58 9 3 chrX 51788816 51789159 -114861137 + IAPLTR4 LTR ERVK 1 345 0 3 980 842 212 5 36 chrX 51789159 51789355 -114860941 + IAPLTR3-int LTR ERVK 1 190 -6631 3 980 421 287 21 14 chrX 51789387 51789532 -114860764 + IAPLTR3-int LTR ERVK 337 482 -6339 3 980 975 202 7 104 chrX 51789582 51789972 -114860324 + IAPLTR3-int LTR ERVK 689 954 -5867 3 980 1208 224 104 55 chrX 51790090 51790585 -114859711 + RMER16-int LTR ERVK 254 685 -5452 3 980 452 230 88 0 chrX 51790577 51790690 -114859606 + RMER16-int LTR ERVK 938 1060 -5077 3 980 328 267 0 55 chrX 51790703 51790794 -114859502 + ETnERV3-int LTR ERVK 2454 2539 -4867 3 980 6539 113 19 18 chrX 51790807 51791968 -114858328 + ETnERV3-int LTR ERVK 2736 3950 -3456 3 980 4911 146 27 72 chrX 51791970 51792994 -114857302 - RLTR13A3 LTR ERVK 0 978 1 3 980 34037 98 23 25 chrX 51793002 51794788 -114855508 - ETnERV3-int LTR ERVK -9 5799 4011 3 980 378 0 0 0 chrX 51794788 51794830 -114855466 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 3 980 34037 107 22 24 chrX 51794830 51798577 -114851719 - ETnERV3-int LTR ERVK -1798 4010 186 3 980 1012 154 11 21 chrX 51798741 51798927 -114851369 - ETnERV3-int LTR ERVK -5622 186 3 3 980 4785 153 27 72 chrX 51798929 51799953 -114850343 - RLTR13A3 LTR ERVK 0 978 1 3 980 1047 204 15 0 chrX 51799955 51800156 -114850140 + IAPLTR3-int LTR ERVK 4005 4208 -3198 3 980 386 238 11 35 chrX 51800193 51800323 -114849973 + IAPLTR3-int LTR ERVK 2357 2464 -2380 3 980 784 102 47 8 chrX 51800330 51800459 -114849837 + MMERVK10C-int LTR ERVK 4528 4661 -2920 3 980 5847 270 47 44 chrX 51800583 51803133 -114847163 + IAPLTR3-int LTR ERVK 3468 7324 -356 3 980 2461 89 27 3 chrX 51803133 51803470 -114846826 + IAPLTR4 LTR ERVK 1 345 0 3 980 526 320 28 0 chrX 51804325 51804503 -114845793 - B4A SINE B4 -38 254 72 3 980 317 206 114 41 chrX 51804753 51804873 -114845423 - RMER4B LTR ERVK -214 252 72 3 980 261 0 0 0 chrX 51804873 51804902 -114845394 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 980 317 164 24 37 chrX 51804902 51804940 -114845356 - RMER4B LTR ERVK -514 71 36 3 980 358 323 51 64 chrX 51805128 51805363 -114844933 + RMER15 LTR ERVL 302 533 -42 3 980 515 225 69 42 chrX 51806367 51806511 -114843785 + B1_Mur1 SINE Alu 2 149 0 3 980 21 0 0 0 chrX 51807059 51807080 -114843216 + AT_rich Low_complexity Low_complexity 1 21 0 3 980 2152 199 28 78 chrX 51807171 51807700 -114842596 + RMER15 LTR ERVL 3 505 -70 3 980 659 263 19 38 chrX 51807983 51808141 -114842155 - RSINE1 SINE B4 -1 164 10 3 980 198 0 0 0 chrX 51808337 51808359 -114841937 + (T)n Simple_repeat Simple_repeat 1 22 0 3 980 1191 170 24 12 chrX 51808932 51809182 -114841114 - Lx2 LINE L1 -2 6995 6743 3 980 200 86 0 28 chrX 51809320 51809356 -114840940 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 3 980 481 313 28 32 chrX 51809898 51810116 -114840180 + RLTR45 LTR ERVK 266 482 0 3 980 343 395 0 9 chrX 51810364 51810479 -114839817 - PB1 SINE Alu -2 125 12 3 980 655 207 79 0 chrX 51810634 51810774 -114839522 + ORR1C2 LTR MaLR 232 382 -2 3 980 1843 203 22 3 chrX 51810855 51811210 -114839086 - MERVL_2A-int LTR ERVL -3505 2256 1895 3 980 4824 267 53 48 chrX 51811210 51813169 -114837127 + Lx6 LINE L1 5398 7362 -98 3 980 852 124 0 0 chrX 51813229 51813366 -114836930 + (GA)n Simple_repeat Simple_repeat 1 137 0 3 980 24 0 0 0 chrX 51813746 51813770 -114836526 + AT_rich Low_complexity Low_complexity 1 24 0 3 980 261 266 42 11 chrX 51814495 51814590 -114835706 - RMER19B LTR ERVK -2 900 803 3 980 3159 194 61 43 chrX 51814602 51815476 -114834820 + RMER17D LTR ERVK 1 889 0 3 980 2387 147 39 47 chrX 51815570 51816056 -114834240 + L1VL4 LINE L1 462 943 -5359 3 980 2560 138 9 5 chrX 51816043 51816488 -114833808 + MusHAL1 LINE L1 1023 1469 -1243 3 980 4368 216 52 47 chrX 51816510 51816689 -114833607 + MYSERV6-int LTR ERVK 2501 2676 -6283 3 980 8782 15 0 0 chrX 51816689 51817684 -114832612 + L1Md_A LINE L1 5587 6581 -1 3 980 4368 216 52 47 chrX 51817684 51818703 -114831593 + MYSERV6-int LTR ERVK 2677 3706 -5253 3 980 1093 84 11 11 chrX 51818707 51818887 -114831409 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 3 980 2781 204 12 0 chrX 51818910 51819479 -114830817 - L1_Mm LINE L1 -276 5607 5032 3 980 449 217 139 42 chrX 51819648 51819792 -114830504 + RLTR20B1 LTR ERVK 13 170 -393 3 980 621 226 34 11 chrX 51819836 51820015 -114830281 + L1_Mur3 LINE L1 1706 1888 -3992 3 980 3700 233 63 16 chrX 51820025 51820910 -114829386 + Lx5 LINE L1 5828 6754 -296 3 980 23 54 0 0 chrX 51821143 51821180 -114829116 + AT_rich Low_complexity Low_complexity 1 37 0 3 980 456 246 18 0 chrX 51821239 51821349 -114828947 + Lx4A LINE L1 6719 6830 -228 3 980 5731 176 35 19 chrX 51821348 51822677 -114827619 + L1_Mus3 LINE L1 4601 5948 -690 3 980 6213 147 4 9 chrX 51822685 51823797 -114826499 + L1_Mus1 LINE L1 1502 2607 -3276 3 980 979 179 37 78 chrX 51823814 51824056 -114826240 - RLTR46 LTR ERVK -6 314 83 3 980 705 92 37 0 chrX 51824073 51824182 -114826114 - IAPEY3-int LTR ERVK 0 7680 7568 3 980 2530 61 0 3 chrX 51824206 51824519 -114825777 - RLTR10-int LTR ERVK -190 1797 1486 3 980 3016 167 3 84 chrX 51824521 51825162 -114825134 - IAPEY3-int LTR ERVK -147 7434 6846 3 980 4985 219 10 16 chrX 51825175 51826439 -114823857 - IAPEY3-int LTR ERVK -1882 5699 4417 3 980 3188 276 46 20 chrX 51826436 51827427 -114822869 - IAPEY3-int LTR ERVK -6129 1551 535 3 980 180 0 0 0 chrX 51827526 51827546 -114822750 + (A)n Simple_repeat Simple_repeat 1 20 0 3 980 1297 179 33 44 chrX 51827646 51827920 -114822376 - RLTR46 LTR ERVK -8 312 42 3 980 14309 156 27 19 chrX 51827933 51828860 -114821436 + L1_Mus1 LINE L1 2615 3532 -2351 3 980 2382 139 7 17 chrX 51828860 51829269 -114821027 - RLTR9E LTR ERVK -4 405 1 3 980 14309 156 27 19 chrX 51829269 51829281 -114821015 + L1_Mus1 LINE L1 3533 3533 -2350 3 980 1951 132 138 28 chrX 51829281 51829709 -114820587 + IAPLTR2_Mm LTR ERVK 1 475 0 3 980 14309 156 27 19 chrX 51829709 51831413 -114818883 + L1_Mus1 LINE L1 3533 5283 -600 3 980 8812 9 0 0 chrX 51831413 51832400 -114817896 + L1Md_A LINE L1 5596 6582 0 3 980 14309 156 27 19 chrX 51832400 51832500 -114817796 + L1_Mus1 LINE L1 5284 5382 -501 3 980 6112 117 8 7 chrX 51832497 51833412 -114816884 + L1_Mus1 LINE L1 5652 6567 0 3 980 480 72 0 0 chrX 51833543 51833612 -114816684 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 980 470 286 70 14 chrX 51833696 51833838 -114816458 + B3 SINE B2 3 152 -64 3 980 236 246 0 90 chrX 51833870 51833937 -114816359 + ID_B1 SINE B4 94 154 -70 3 980 243 374 20 10 chrX 51833927 51834027 -114816269 + B3 SINE B2 107 207 -9 3 980 244 372 10 0 chrX 51834902 51835004 -114815292 - PB1D10 SINE Alu -14 103 1 3 980 354 136 17 0 chrX 51835579 51835638 -114814658 + HAL1-3A_ME LINE L1 1968 2027 -831 3 980 384 176 10 19 chrX 51835638 51835742 -114814554 + (TA)n Simple_repeat Simple_repeat 2 104 0 3 980 208 147 0 0 chrX 51835906 51835940 -114814356 + (T)n Simple_repeat Simple_repeat 1 34 0 3 980 12550 150 9 5 chrX 51836387 51839326 -114810970 - L1_Mus3 LINE L1 -3 6635 3687 3 980 510 263 102 66 chrX 51839361 51839460 -114810836 + B4A SINE B4 115 222 -70 3 980 1016 97 0 52 chrX 51839460 51839613 -114810683 + B1_Mus1 SINE Alu 2 146 -2 3 980 207 0 0 0 chrX 51839613 51839636 -114810660 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 980 348 24 0 0 chrX 51839637 51839678 -114810618 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 980 510 263 102 66 chrX 51839678 51839742 -114810554 + B4A SINE B4 223 286 -6 3 980 831 293 0 0 chrX 51839942 51840123 -114810173 + B3 SINE B2 2 182 -34 3 980 221 286 134 60 chrX 51841046 51841180 -114809116 - B1F SINE Alu -2 147 4 3 980 25 0 0 0 chrX 51841181 51841206 -114809090 + AT_rich Low_complexity Low_complexity 1 25 0 3 980 510 17 0 0 chrX 51841502 51841561 -114808735 + (GA)n Simple_repeat Simple_repeat 1 59 0 3 980 26 50 0 0 chrX 51841826 51841866 -114808430 + AT_rich Low_complexity Low_complexity 1 40 0 3 980 23 33 0 0 chrX 51841884 51841914 -114808382 + AT_rich Low_complexity Low_complexity 1 30 0 3 980 21 36 0 0 chrX 51842829 51842857 -114807439 + AT_rich Low_complexity Low_complexity 1 28 0 3 980 4692 156 33 8 chrX 51842859 51843705 -114806591 - Lx LINE L1 -1 6653 5787 3 980 2550 161 24 0 chrX 51843706 51844198 -114806098 - L1_Mur2 LINE L1 -1127 4750 4247 3 980 3517 199 34 51 chrX 51844201 51845647 -114804649 - L1VL2 LINE L1 -2199 1416 2 3 980 586 283 132 6 chrX 51845653 51845827 -114804469 - L1VL2 LINE L1 -6063 272 77 3 980 580 331 84 19 chrX 51845962 51846224 -114804072 - B4A SINE B4 -3 289 11 4 980 921 241 19 0 chrX 51846465 51846672 -114803624 - B3 SINE B2 -5 211 1 4 980 278 67 0 22 chrX 51846681 51846727 -114803569 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 4 980 419 306 58 0 chrX 51846855 51846976 -114803320 - B1F SINE Alu -1 148 21 4 980 455 287 0 0 chrX 51847034 51847142 -114803154 - B3 SINE B2 -11 205 98 4 980 3657 153 23 25 chrX 51847998 51848689 -114801607 - YREP_Mm Unknown Unknown -35 1777 1088 4 980 578 61 0 0 chrX 51848821 51848903 -114801393 - YREP_Mm Unknown Unknown -745 1067 986 4 980 328 311 186 62 chrX 51848908 51849134 -114801162 - L2 LINE L2 -1119 2300 2047 4 980 438 351 45 0 chrX 51849343 51849477 -114800819 + B4A SINE B4 131 270 -22 4 980 180 343 75 9 chrX 51849507 51849613 -114800683 - L2 LINE L2 -1391 2028 1916 4 980 281 312 49 24 chrX 51849972 51850136 -114800160 - L2 LINE L2 -1758 1661 1494 4 980 5666 151 3 11 chrX 51851476 51852443 -114797853 - Lx3A LINE L1 -7 6974 6016 4 980 29735 7 0 0 chrX 51852784 51856164 -114794132 + L1Md_A LINE L1 2207 5586 -297 4 980 8858 10 0 0 chrX 51856164 51857157 -114793139 + L1Md_A LINE L1 5587 6579 -3 4 980 241 328 77 36 chrX 51857297 51857544 -114792752 + RMER17C LTR ERVK 87 343 -67 4 980 289 235 29 0 chrX 51858103 51858171 -114792125 - B4A SINE B4 -38 254 185 4 980 355 183 99 39 chrX 51858512 51858663 -114791633 - RMER4B LTR ERVK -344 241 33 4 980 233 330 0 26 chrX 51858843 51858958 -114791338 + RMER15 LTR ERVL 302 413 -162 4 980 219 146 0 0 chrX 51858977 51859018 -114791278 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 4 980 615 198 67 22 chrX 51860101 51860235 -114790061 + B1_Mur1 SINE Alu 2 141 -8 4 980 550 192 9 9 chrX 51860915 51861020 -114789276 + RMER15 LTR ERVL 1 105 -470 4 980 2318 190 8 46 chrX 51861005 51861485 -114788811 + RMER15 LTR ERVL 47 508 -67 4 980 250 342 54 9 chrX 51861566 51861678 -114788618 - RSINE1 SINE B4 -48 117 1 4 980 646 262 19 39 chrX 51861766 51861921 -114788375 - RSINE1 SINE B4 -2 163 12 4 980 9201 58 5 1 chrX 51862330 51863783 -114786513 - L1Md_F3 LINE L1 -431 6153 4695 4 980 5437 65 16 0 chrX 51863781 51864523 -114785773 + L1_Mm LINE L1 3734 4487 -1396 4 980 2454 173 8 10 chrX 51864519 51865016 -114785280 - L1_Mm LINE L1 -3583 2300 1805 4 980 3786 161 16 21 chrX 51865017 51865631 -114784665 - ETnERV2-int LTR ERVK -302 7104 6494 4 980 1148 327 25 21 chrX 51865683 51866240 -114784056 - RNERVK23-int LTR ERVK -413 7804 7246 4 980 311 277 0 0 chrX 51867091 51867174 -114783122 - RLTR6-int LTR ERV1 -1543 6235 6153 4 980 425 265 15 36 chrX 51867100 51867237 -114783059 - RNERVK23-int LTR ERVK -1889 6328 6195 4 980 1233 304 48 41 chrX 51867613 51868401 -114781895 - RNERVK23-int LTR ERVK -2513 5704 4586 4 980 2172 300 59 53 chrX 51868396 51870103 -114780193 - RNERVK23-int LTR ERVK -2512 4309 2696 4 980 252 329 50 99 chrX 51870748 51871112 -114779184 - RNERVK23-int LTR ERVK -4524 1643 1298 4 980 277 306 30 43 chrX 51872242 51872406 -114777890 - RNERVK23-int LTR ERVK -6914 330 169 4 980 3416 135 9 2 chrX 51873080 51873723 -114776573 - L1VL1 LINE L1 -2104 1594 947 4 980 1205 116 17 0 chrX 51873733 51873914 -114776382 - MTB LTR MaLR 0 400 217 4 980 4549 153 2 24 chrX 51873915 51874725 -114775571 - L1_Mm LINE L1 -541 5342 4550 4 980 399 136 0 29 chrX 51874733 51874843 -114775453 + L1Md_F LINE L1 1172 1277 -2638 4 980 13438 152 4 15 chrX 51874815 51877318 -114772978 + L1Md_F LINE L1 1179 3659 -2224 4 980 2170 196 28 21 chrX 51877315 51877748 -114772548 + L1Md_F LINE L1 5432 5867 -16 4 980 12099 141 11 15 chrX 51877753 51879803 -114770493 + RMER16-int LTR ERVK 2413 4453 -953 4 980 2710 58 9 3 chrX 51879803 51880146 -114770150 + IAPLTR4 LTR ERVK 1 345 0 4 980 842 212 5 36 chrX 51880146 51880342 -114769954 + IAPLTR3-int LTR ERVK 1 190 -6631 4 980 416 287 21 14 chrX 51880374 51880519 -114769777 + IAPLTR3-int LTR ERVK 337 482 -6339 4 980 984 224 7 74 chrX 51880569 51880854 -114769442 + IAPLTR3-int LTR ERVK 689 954 -5867 4 980 23 68 0 0 chrX 51880863 51880907 -114769389 + AT_rich Low_complexity Low_complexity 1 44 0 4 980 1208 230 103 34 chrX 51881080 51881575 -114768721 + RMER16-int LTR ERVK 254 685 -5452 4 980 452 230 88 0 chrX 51881567 51881680 -114768616 + RMER16-int LTR ERVK 938 1060 -5077 4 980 342 256 0 55 chrX 51881693 51881784 -114768512 + ETnERV3-int LTR ERVK 2454 2539 -4867 4 980 6573 112 19 16 chrX 51881797 51882955 -114767341 + ETnERV3-int LTR ERVK 2736 3950 -3456 4 980 4884 147 27 72 chrX 51882957 51883981 -114766315 - RLTR13A3 LTR ERVK 0 978 1 4 980 33884 98 23 26 chrX 51883989 51885775 -114764521 - ETnERV3-int LTR ERVK -9 5799 4011 4 980 306 0 0 0 chrX 51885775 51885809 -114764487 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 4 980 33884 105 24 25 chrX 51885809 51889557 -114760739 - ETnERV3-int LTR ERVK -1798 4010 175 4 980 1011 154 11 21 chrX 51889721 51889907 -114760389 - ETnERV3-int LTR ERVK -5622 186 3 4 980 4811 152 27 72 chrX 51889909 51890933 -114759363 - RLTR13A3 LTR ERVK 0 978 1 4 980 1047 204 15 0 chrX 51890935 51891136 -114759160 + IAPLTR3-int LTR ERVK 4005 4208 -3198 4 980 386 238 11 35 chrX 51891173 51891303 -114758993 + IAPLTR3-int LTR ERVK 2357 2464 -2380 4 980 784 102 47 8 chrX 51891310 51891439 -114758857 + MMERVK10C-int LTR ERVK 4528 4661 -2920 4 980 5847 270 47 44 chrX 51891563 51894113 -114756183 + IAPLTR3-int LTR ERVK 3468 7324 -356 4 980 2461 89 27 3 chrX 51894113 51894450 -114755846 + IAPLTR4 LTR ERVK 1 345 0 4 980 526 320 28 0 chrX 51895305 51895483 -114754813 - B4A SINE B4 -38 254 72 4 980 317 206 114 41 chrX 51895733 51895853 -114754443 - RMER4B LTR ERVK -214 252 72 4 980 261 0 0 0 chrX 51895853 51895882 -114754414 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 980 317 164 24 37 chrX 51895882 51895920 -114754376 - RMER4B LTR ERVK -514 71 36 4 980 358 323 51 64 chrX 51896108 51896343 -114753953 + RMER15 LTR ERVL 302 533 -42 4 980 515 225 69 42 chrX 51897347 51897491 -114752805 + B1_Mur1 SINE Alu 2 149 0 4 980 21 0 0 0 chrX 51898039 51898060 -114752236 + AT_rich Low_complexity Low_complexity 1 21 0 4 980 2152 199 28 78 chrX 51898151 51898680 -114751616 + RMER15 LTR ERVL 3 505 -70 4 980 659 263 19 38 chrX 51898963 51899121 -114751175 - RSINE1 SINE B4 -1 164 10 4 980 198 0 0 0 chrX 51899317 51899339 -114750957 + (T)n Simple_repeat Simple_repeat 1 22 0 4 980 1191 170 24 12 chrX 51899912 51900162 -114750134 - Lx2 LINE L1 -2 6995 6743 4 980 200 86 0 28 chrX 51900300 51900336 -114749960 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 4 980 481 313 28 32 chrX 51900878 51901096 -114749200 + RLTR45 LTR ERVK 266 482 0 4 980 343 395 0 9 chrX 51901344 51901459 -114748837 - PB1 SINE Alu -2 125 12 4 980 655 207 79 0 chrX 51901614 51901754 -114748542 + ORR1C2 LTR MaLR 232 382 -2 4 980 1843 203 22 3 chrX 51901835 51902190 -114748106 - MERVL_2A-int LTR ERVL -3505 2256 1895 4 980 4824 267 53 48 chrX 51902190 51904149 -114746147 + Lx6 LINE L1 5398 7362 -98 4 980 852 124 0 0 chrX 51904209 51904346 -114745950 + (GA)n Simple_repeat Simple_repeat 1 137 0 4 981 24 0 0 0 chrX 51904726 51904750 -114745546 + AT_rich Low_complexity Low_complexity 1 24 0 4 981 261 266 42 11 chrX 51905475 51905570 -114744726 - RMER19B LTR ERVK -2 900 803 4 981 3159 194 61 43 chrX 51905582 51906456 -114743840 + RMER17D LTR ERVK 1 889 0 4 981 2387 147 39 47 chrX 51906550 51907036 -114743260 + L1VL4 LINE L1 462 943 -5359 4 981 2560 138 9 5 chrX 51907023 51907468 -114742828 + MusHAL1 LINE L1 1023 1469 -1243 4 981 4368 216 52 47 chrX 51907490 51907669 -114742627 + MYSERV6-int LTR ERVK 2501 2676 -6283 4 981 8782 15 0 0 chrX 51907669 51908664 -114741632 + L1Md_A LINE L1 5587 6581 -1 4 981 4368 216 52 47 chrX 51908664 51909683 -114740613 + MYSERV6-int LTR ERVK 2677 3706 -5253 4 981 1229 79 17 0 chrX 51909685 51909914 -114740382 + (TCTA)n Simple_repeat Simple_repeat 1 232 0 4 981 2795 205 11 0 chrX 51909914 51910484 -114739812 - L1_Mm LINE L1 -276 5607 5032 4 981 449 217 139 42 chrX 51910653 51910797 -114739499 + RLTR20B1 LTR ERVK 13 170 -393 4 981 621 226 34 11 chrX 51910841 51911020 -114739276 + L1_Mur3 LINE L1 1706 1888 -3992 4 981 3700 233 63 16 chrX 51911030 51911915 -114738381 + Lx5 LINE L1 5828 6754 -296 4 981 23 54 0 0 chrX 51912148 51912185 -114738111 + AT_rich Low_complexity Low_complexity 1 37 0 4 981 456 246 18 0 chrX 51912244 51912354 -114737942 + Lx4A LINE L1 6719 6830 -228 4 981 5731 176 35 19 chrX 51912353 51913682 -114736614 + L1_Mus3 LINE L1 4601 5948 -690 4 981 6213 147 4 9 chrX 51913690 51914802 -114735494 + L1_Mus1 LINE L1 1502 2607 -3276 4 981 979 179 37 78 chrX 51914819 51915061 -114735235 - RLTR46 LTR ERVK -6 314 83 4 981 705 92 37 0 chrX 51915078 51915187 -114735109 - IAPEY3-int LTR ERVK 0 7680 7568 4 981 2530 61 0 3 chrX 51915211 51915524 -114734772 - RLTR10-int LTR ERVK -190 1797 1486 4 981 3016 167 3 84 chrX 51915526 51916167 -114734129 - IAPEY3-int LTR ERVK -147 7434 6846 4 981 4985 219 10 16 chrX 51916180 51917444 -114732852 - IAPEY3-int LTR ERVK -1882 5699 4417 4 981 3188 276 46 20 chrX 51917441 51918432 -114731864 - IAPEY3-int LTR ERVK -6129 1551 535 4 981 180 0 0 0 chrX 51918531 51918551 -114731745 + (A)n Simple_repeat Simple_repeat 1 20 0 4 981 1297 179 33 44 chrX 51918651 51918925 -114731371 - RLTR46 LTR ERVK -8 312 42 4 981 14309 156 28 20 chrX 51918938 51919865 -114730431 + L1_Mus1 LINE L1 2615 3532 -2351 4 981 2382 139 7 17 chrX 51919865 51920274 -114730022 - RLTR9E LTR ERVK -4 405 1 4 981 14309 156 28 20 chrX 51920274 51920286 -114730010 + L1_Mus1 LINE L1 3533 3533 -2350 4 981 1933 135 138 28 chrX 51920286 51920714 -114729582 + IAPLTR2_Mm LTR ERVK 1 475 0 4 981 14309 156 28 20 chrX 51920714 51922417 -114727879 + L1_Mus1 LINE L1 3533 5283 -600 4 981 8836 8 0 0 chrX 51922417 51923404 -114726892 + L1Md_A LINE L1 5596 6582 0 4 981 14309 156 28 20 chrX 51923404 51923505 -114726791 + L1_Mus1 LINE L1 5284 5382 -501 4 981 6127 117 8 7 chrX 51923502 51924417 -114725879 + L1_Mus1 LINE L1 5652 6567 0 4 981 429 90 0 0 chrX 51924548 51924615 -114725681 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 981 470 286 70 14 chrX 51924699 51924841 -114725455 + B3 SINE B2 3 152 -64 4 981 236 246 0 90 chrX 51924873 51924940 -114725356 + ID_B1 SINE B4 94 154 -70 4 981 243 374 20 10 chrX 51924930 51925030 -114725266 + B3 SINE B2 107 207 -9 4 981 244 372 10 0 chrX 51925905 51926007 -114724289 - PB1D10 SINE Alu -14 103 1 4 981 354 136 17 0 chrX 51926582 51926641 -114723655 + HAL1-3A_ME LINE L1 1968 2027 -831 4 981 384 176 10 19 chrX 51926641 51926745 -114723551 + (TA)n Simple_repeat Simple_repeat 2 104 0 4 981 208 147 0 0 chrX 51926909 51926943 -114723353 + (T)n Simple_repeat Simple_repeat 1 34 0 4 981 12550 150 9 5 chrX 51927390 51930329 -114719967 - L1_Mus3 LINE L1 -3 6635 3687 4 981 510 263 102 66 chrX 51930364 51930463 -114719833 + B4A SINE B4 115 222 -70 4 981 1016 97 0 52 chrX 51930463 51930616 -114719680 + B1_Mus1 SINE Alu 2 146 -2 4 981 207 0 0 0 chrX 51930616 51930639 -114719657 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 981 348 24 0 0 chrX 51930640 51930681 -114719615 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 981 510 263 102 66 chrX 51930681 51930745 -114719551 + B4A SINE B4 223 286 -6 4 981 831 293 0 0 chrX 51930945 51931126 -114719170 + B3 SINE B2 2 182 -34 4 981 221 286 134 60 chrX 51932049 51932183 -114718113 - B1F SINE Alu -2 147 4 4 981 25 0 0 0 chrX 51932184 51932209 -114718087 + AT_rich Low_complexity Low_complexity 1 25 0 4 981 510 17 0 0 chrX 51932505 51932564 -114717732 + (GA)n Simple_repeat Simple_repeat 1 59 0 4 981 26 50 0 0 chrX 51932829 51932869 -114717427 + AT_rich Low_complexity Low_complexity 1 40 0 4 981 23 33 0 0 chrX 51932887 51932917 -114717379 + AT_rich Low_complexity Low_complexity 1 30 0 4 981 21 36 0 0 chrX 51933832 51933860 -114716436 + AT_rich Low_complexity Low_complexity 1 28 0 4 981 4692 156 33 8 chrX 51933862 51934708 -114715588 - Lx LINE L1 -1 6653 5787 4 981 2550 161 24 0 chrX 51934709 51935201 -114715095 - L1_Mur2 LINE L1 -1127 4750 4247 5 981 3517 199 34 51 chrX 51935204 51936650 -114713646 - L1VL2 LINE L1 -2199 1416 2 5 981 586 283 132 6 chrX 51936656 51936830 -114713466 - L1VL2 LINE L1 -6063 272 77 5 981 580 331 84 19 chrX 51936965 51937227 -114713069 - B4A SINE B4 -3 289 11 5 981 921 241 19 0 chrX 51937468 51937675 -114712621 - B3 SINE B2 -5 211 1 5 981 278 67 0 22 chrX 51937684 51937730 -114712566 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 5 981 419 306 58 0 chrX 51937858 51937979 -114712317 - B1F SINE Alu -1 148 21 5 981 455 287 0 0 chrX 51938037 51938145 -114712151 - B3 SINE B2 -11 205 98 5 981 3657 153 23 25 chrX 51939001 51939692 -114710604 - YREP_Mm Unknown Unknown -35 1777 1088 5 981 578 61 0 0 chrX 51939824 51939906 -114710390 - YREP_Mm Unknown Unknown -745 1067 986 5 981 328 311 186 62 chrX 51939911 51940137 -114710159 - L2 LINE L2 -1119 2300 2047 5 981 438 351 45 0 chrX 51940346 51940480 -114709816 + B4A SINE B4 131 270 -22 5 981 180 343 75 9 chrX 51940510 51940616 -114709680 - L2 LINE L2 -1391 2028 1916 5 981 281 312 49 24 chrX 51940975 51941139 -114709157 - L2 LINE L2 -1758 1661 1494 5 981 5666 151 3 11 chrX 51942479 51943446 -114706850 - Lx3A LINE L1 -7 6974 6016 5 981 29735 7 0 0 chrX 51943787 51947167 -114703129 + L1Md_A LINE L1 2207 5586 -297 5 981 8858 10 0 0 chrX 51947167 51948160 -114702136 + L1Md_A LINE L1 5587 6579 -3 5 981 241 328 77 36 chrX 51948300 51948547 -114701749 + RMER17C LTR ERVK 87 343 -67 5 981 289 235 29 0 chrX 51949106 51949174 -114701122 - B4A SINE B4 -38 254 185 5 981 355 183 99 39 chrX 51949515 51949666 -114700630 - RMER4B LTR ERVK -344 241 33 5 981 233 330 0 26 chrX 51949846 51949961 -114700335 + RMER15 LTR ERVL 302 413 -162 5 981 219 146 0 0 chrX 51949980 51950021 -114700275 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 5 981 615 198 67 22 chrX 51951104 51951238 -114699058 + B1_Mur1 SINE Alu 2 141 -8 5 981 550 192 9 9 chrX 51951918 51952023 -114698273 + RMER15 LTR ERVL 1 105 -470 5 981 2318 190 8 46 chrX 51952008 51952488 -114697808 + RMER15 LTR ERVL 47 508 -67 5 981 250 342 54 9 chrX 51952569 51952681 -114697615 - RSINE1 SINE B4 -48 117 1 5 981 646 262 19 39 chrX 51952769 51952924 -114697372 - RSINE1 SINE B4 -2 163 12 5 981 9201 58 5 1 chrX 51953333 51954786 -114695510 - L1Md_F3 LINE L1 -431 6153 4695 5 981 5437 65 16 0 chrX 51954784 51955526 -114694770 + L1_Mm LINE L1 3734 4487 -1396 5 981 2454 173 8 10 chrX 51955522 51956019 -114694277 - L1_Mm LINE L1 -3583 2300 1805 5 981 3786 161 16 21 chrX 51956020 51956634 -114693662 - ETnERV2-int LTR ERVK -302 7104 6494 5 981 1148 327 25 21 chrX 51956686 51957243 -114693053 - RNERVK23-int LTR ERVK -413 7804 7246 5 981 311 277 0 0 chrX 51958094 51958177 -114692119 - RLTR6-int LTR ERV1 -1543 6235 6153 5 981 425 265 15 36 chrX 51958103 51958240 -114692056 - RNERVK23-int LTR ERVK -1889 6328 6195 5 981 1233 304 48 41 chrX 51958616 51959404 -114690892 - RNERVK23-int LTR ERVK -2513 5704 4586 5 981 2172 300 59 53 chrX 51959399 51961106 -114689190 - RNERVK23-int LTR ERVK -2512 4309 2696 5 981 252 329 50 99 chrX 51961751 51962115 -114688181 - RNERVK23-int LTR ERVK -4524 1643 1298 5 981 277 306 30 43 chrX 51963245 51963409 -114686887 - RNERVK23-int LTR ERVK -6914 330 169 5 981 3416 135 9 2 chrX 51964083 51964726 -114685570 - L1VL1 LINE L1 -2104 1594 947 5 981 1205 116 17 0 chrX 51964736 51964917 -114685379 - MTB LTR MaLR 0 400 217 5 981 4549 153 2 24 chrX 51964918 51965728 -114684568 - L1_Mm LINE L1 -541 5342 4550 5 981 399 136 0 29 chrX 51965736 51965846 -114684450 + L1Md_F LINE L1 1172 1277 -2638 5 981 13438 152 4 15 chrX 51965818 51968321 -114681975 + L1Md_F LINE L1 1179 3659 -2224 5 981 2170 196 28 21 chrX 51968318 51968751 -114681545 + L1Md_F LINE L1 5432 5867 -16 5 981 12099 141 11 15 chrX 51968756 51970806 -114679490 + RMER16-int LTR ERVK 2413 4453 -953 5 981 2710 58 9 3 chrX 51970806 51971149 -114679147 + IAPLTR4 LTR ERVK 1 345 0 5 981 842 212 5 36 chrX 51971149 51971345 -114678951 + IAPLTR3-int LTR ERVK 1 190 -6631 5 981 416 287 21 14 chrX 51971377 51971522 -114678774 + IAPLTR3-int LTR ERVK 337 482 -6339 5 981 984 224 7 74 chrX 51971572 51971857 -114678439 + IAPLTR3-int LTR ERVK 689 954 -5867 5 981 23 68 0 0 chrX 51971866 51971910 -114678386 + AT_rich Low_complexity Low_complexity 1 44 0 5 981 1208 230 103 34 chrX 51972083 51972578 -114677718 + RMER16-int LTR ERVK 254 685 -5452 5 981 452 230 88 0 chrX 51972570 51972683 -114677613 + RMER16-int LTR ERVK 938 1060 -5077 5 981 342 256 0 55 chrX 51972696 51972787 -114677509 + ETnERV3-int LTR ERVK 2454 2539 -4867 5 981 6573 112 19 16 chrX 51972800 51973958 -114676338 + ETnERV3-int LTR ERVK 2736 3950 -3456 5 981 4884 147 27 72 chrX 51973960 51974984 -114675312 - RLTR13A3 LTR ERVK 0 978 1 5 981 34077 98 23 25 chrX 51974992 51976778 -114673518 - ETnERV3-int LTR ERVK -9 5799 4011 5 981 306 0 0 0 chrX 51976778 51976812 -114673484 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 5 981 34077 107 22 25 chrX 51976812 51980560 -114669736 - ETnERV3-int LTR ERVK -1798 4010 186 5 981 1011 154 11 21 chrX 51980724 51980910 -114669386 - ETnERV3-int LTR ERVK -5622 186 3 5 981 4811 152 27 72 chrX 51980912 51981936 -114668360 - RLTR13A3 LTR ERVK 0 978 1 5 981 1047 204 15 0 chrX 51981938 51982139 -114668157 + IAPLTR3-int LTR ERVK 4005 4208 -3198 5 981 386 238 11 35 chrX 51982176 51982306 -114667990 + IAPLTR3-int LTR ERVK 2357 2464 -2380 5 981 784 102 47 8 chrX 51982313 51982442 -114667854 + MMERVK10C-int LTR ERVK 4528 4661 -2920 5 981 5847 269 47 44 chrX 51982566 51985116 -114665180 + IAPLTR3-int LTR ERVK 3468 7324 -356 5 981 2461 89 27 3 chrX 51985116 51985453 -114664843 + IAPLTR4 LTR ERVK 1 345 0 5 981 526 320 28 0 chrX 51986308 51986486 -114663810 - B4A SINE B4 -38 254 72 5 981 324 162 24 36 chrX 51986813 51986856 -114663440 - RMER4B LTR ERVK -471 114 72 5 981 261 0 0 0 chrX 51986856 51986885 -114663411 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 981 324 162 24 36 chrX 51986885 51986924 -114663372 - RMER4B LTR ERVK -514 71 35 5 981 337 329 42 71 chrX 51987108 51987347 -114662949 + RMER15 LTR ERVL 302 533 -42 5 981 515 225 69 42 chrX 51988351 51988495 -114661801 + B1_Mur1 SINE Alu 2 149 0 5 981 21 0 0 0 chrX 51989043 51989064 -114661232 + AT_rich Low_complexity Low_complexity 1 21 0 5 981 2152 199 28 78 chrX 51989155 51989684 -114660612 + RMER15 LTR ERVL 3 505 -70 5 981 659 263 19 38 chrX 51989967 51990125 -114660171 - RSINE1 SINE B4 -1 164 10 5 981 189 0 0 0 chrX 51990321 51990342 -114659954 + (T)n Simple_repeat Simple_repeat 1 21 0 5 981 1225 166 24 12 chrX 51990915 51991165 -114659131 - Lx2 LINE L1 -2 6995 6743 5 981 200 86 0 28 chrX 51991304 51991340 -114658956 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 5 981 481 313 28 32 chrX 51991882 51992100 -114658196 + RLTR45 LTR ERVK 266 482 0 5 981 343 395 0 9 chrX 51992361 51992476 -114657820 - PB1 SINE Alu -2 125 12 5 981 655 207 79 0 chrX 51992631 51992771 -114657525 + ORR1C2 LTR MaLR 232 382 -2 5 981 1842 203 22 3 chrX 51992852 51993207 -114657089 - MERVL_2A-int LTR ERVL -3505 2256 1895 5 981 4797 264 54 49 chrX 51993207 51995166 -114655130 + Lx6 LINE L1 5398 7362 -98 5 981 888 121 0 0 chrX 51995226 51995367 -114654929 + (GA)n Simple_repeat Simple_repeat 1 141 0 5 981 24 0 0 0 chrX 51995747 51995771 -114654525 + AT_rich Low_complexity Low_complexity 1 24 0 5 981 261 266 42 11 chrX 51996496 51996591 -114653705 - RMER19B LTR ERVK -2 900 803 5 981 3146 195 61 43 chrX 51996603 51997477 -114652819 + RMER17D LTR ERVK 1 889 0 5 981 2365 149 39 47 chrX 51997571 51998057 -114652239 + L1VL4 LINE L1 462 943 -5359 5 981 2560 138 9 5 chrX 51998044 51998489 -114651807 + MusHAL1 LINE L1 1023 1469 -1243 5 981 1679 196 75 79 chrX 51998511 51998690 -114651606 + MYSERV6-int LTR ERVK 2501 2676 -6283 5 981 8786 15 0 0 chrX 51998690 51999686 -114650610 + L1Md_A LINE L1 5587 6582 0 5 981 1679 196 75 79 chrX 51999686 52000000 -114650296 + MYSERV6-int LTR ERVK 2677 2992 -5967 5 981 2447 231 37 24 chrX 52000000 52000705 -114649591 + MYSERV6-int LTR ERVK 2993 3706 -5253 1 981 1229 79 17 0 chrX 52000707 52000936 -114649360 + (TCTA)n Simple_repeat Simple_repeat 1 232 0 2 981 2614 205 11 0 chrX 52000936 52001506 -114648790 - L1_Mm LINE L1 -276 5607 5032 3 981 452 217 139 42 chrX 52001675 52001819 -114648477 + RLTR20B1 LTR ERVK 13 170 -393 4 981 567 226 34 11 chrX 52001863 52002042 -114648254 + L1_Mur3 LINE L1 1706 1888 -3992 5 981 3404 233 63 16 chrX 52002052 52002937 -114647359 + Lx5 LINE L1 5828 6754 -296 6 981 23 54 0 0 chrX 52003170 52003207 -114647089 + AT_rich Low_complexity Low_complexity 1 37 0 7 981 420 246 18 0 chrX 52003266 52003376 -114646920 + Lx4A LINE L1 6719 6830 -228 8 981 5308 178 35 19 chrX 52003375 52004704 -114645592 + L1_Mus3 LINE L1 4601 5948 -690 9 981 5968 146 3 2 chrX 52004712 52005817 -114644479 + L1_Mus1 LINE L1 1502 2607 -3276 1 981 997 179 37 78 chrX 52005834 52006076 -114644220 - RLTR46 LTR ERVK -6 314 83 1 981 667 92 37 0 chrX 52006093 52006202 -114644094 - IAPEY3-int LTR ERVK 0 7680 7568 1 981 2406 61 0 3 chrX 52006226 52006539 -114643757 - RLTR10-int LTR ERVK -190 1797 1486 1 981 2809 167 3 84 chrX 52006541 52007182 -114643114 - IAPEY3-int LTR ERVK -147 7434 6846 1 981 4633 218 9 15 chrX 52007195 52008459 -114641837 - IAPEY3-int LTR ERVK -1882 5699 4417 1 981 2875 277 46 20 chrX 52008456 52009447 -114640849 - IAPEY3-int LTR ERVK -6129 1551 535 1 981 180 0 0 0 chrX 52009546 52009566 -114640730 + (A)n Simple_repeat Simple_repeat 1 20 0 1 981 1318 179 33 44 chrX 52009666 52009940 -114640356 - RLTR46 LTR ERVK -8 312 42 1 981 13455 156 28 20 chrX 52009953 52010880 -114639416 + L1_Mus1 LINE L1 2615 3532 -2351 1 981 2406 139 7 17 chrX 52010880 52011289 -114639007 - RLTR9E LTR ERVK -4 405 1 1 981 13455 156 28 20 chrX 52011289 52011301 -114638995 + L1_Mus1 LINE L1 3533 3533 -2350 1 981 1952 128 142 33 chrX 52011301 52011729 -114638567 + IAPLTR2_Mm LTR ERVK 1 475 0 1 981 13455 156 28 20 chrX 52011729 52013432 -114636864 + L1_Mus1 LINE L1 3533 5292 -591 1 981 8876 8 0 0 chrX 52013432 52014419 -114635877 + L1Md_A LINE L1 5596 6582 0 1 981 13455 156 28 20 chrX 52014419 52014520 -114635776 + L1_Mus1 LINE L1 5293 5382 -501 1 981 5804 117 8 7 chrX 52014517 52015432 -114634864 + L1_Mus1 LINE L1 5652 6567 0 1 981 429 90 0 0 chrX 52015563 52015630 -114634666 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 981 478 286 70 14 chrX 52015714 52015856 -114634440 + B3 SINE B2 3 152 -64 2 981 239 246 0 90 chrX 52015888 52015955 -114634341 + ID_B1 SINE B4 94 154 -70 2 981 245 374 20 10 chrX 52015945 52016045 -114634251 + B3 SINE B2 107 207 -9 2 981 240 372 10 0 chrX 52016921 52017023 -114633273 - PB1D10 SINE Alu -14 103 1 2 981 211 267 227 0 chrX 52017034 52017109 -114633187 - B1F SINE Alu 0 149 58 2 981 416 176 0 21 chrX 52017608 52017701 -114632595 + (CATATA)n Simple_repeat Simple_repeat 6 96 0 2 981 208 147 0 0 chrX 52017899 52017933 -114632363 + (T)n Simple_repeat Simple_repeat 1 34 0 2 981 11798 149 8 7 chrX 52018380 52021326 -114628970 - L1_Mus3 LINE L1 -3 6635 3687 2 981 405 222 162 0 chrX 52021361 52021460 -114628836 + B4A SINE B4 115 229 -63 2 981 1023 103 0 52 chrX 52021460 52021614 -114628682 + B1_Mus1 SINE Alu 2 147 -1 2 981 420 20 0 0 chrX 52021627 52021676 -114628620 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 981 836 293 0 0 chrX 52021941 52022122 -114628174 + B3 SINE B2 2 182 -34 3 981 215 286 134 60 chrX 52023045 52023179 -114627117 - B1F SINE Alu -2 147 4 3 981 24 0 0 0 chrX 52023180 52023204 -114627092 + AT_rich Low_complexity Low_complexity 1 24 0 3 981 510 17 0 0 chrX 52023500 52023559 -114626737 + (GA)n Simple_repeat Simple_repeat 1 59 0 3 981 26 50 0 0 chrX 52023824 52023864 -114626432 + AT_rich Low_complexity Low_complexity 1 40 0 3 981 23 33 0 0 chrX 52023882 52023912 -114626384 + AT_rich Low_complexity Low_complexity 1 30 0 3 981 21 36 0 0 chrX 52024827 52024855 -114625441 + AT_rich Low_complexity Low_complexity 1 28 0 3 981 4752 156 32 8 chrX 52024857 52025704 -114624592 - Lx LINE L1 -1 6653 5787 3 981 2393 161 24 0 chrX 52025705 52026197 -114624099 - L1_Mur2 LINE L1 -1127 4750 4247 3 981 3210 198 35 49 chrX 52026200 52027618 -114622678 - L1VL2 LINE L1 -2199 1416 22 4 981 533 276 141 0 chrX 52027665 52027828 -114622468 - L1VL2 LINE L1 -6073 262 77 4 981 588 331 84 19 chrX 52027963 52028225 -114622071 - B4A SINE B4 -3 289 11 4 981 870 244 29 0 chrX 52028466 52028671 -114621625 - B3 SINE B2 -5 211 1 4 981 282 73 0 0 chrX 52028680 52028721 -114621575 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 4 981 421 306 58 0 chrX 52028853 52028974 -114621322 - B1F SINE Alu -1 148 21 4 981 455 287 0 0 chrX 52029032 52029140 -114621156 - B3 SINE B2 -11 205 98 4 981 3615 156 23 25 chrX 52029997 52030688 -114619608 - YREP_Mm Unknown Unknown -35 1777 1088 4 981 572 61 0 0 chrX 52030822 52030904 -114619392 - YREP_Mm Unknown Unknown -745 1067 986 4 981 334 335 159 35 chrX 52030909 52031135 -114619161 - L2 LINE L2 -1119 2300 2047 4 981 424 358 45 0 chrX 52031344 52031478 -114618818 + B4A SINE B4 131 270 -22 4 981 286 312 49 24 chrX 52031969 52032133 -114618163 - L2 LINE L2 -1758 1661 1494 4 981 5704 151 3 13 chrX 52033473 52034442 -114615854 - Lx3A LINE L1 -7 6974 6016 5 122 28328 8 1 0 chrX 52034783 52038159 -114612137 + L1Md_A LINE L1 2207 5586 -297 5 982 8830 14 0 0 chrX 52038159 52039152 -114611144 + L1Md_A LINE L1 5587 6579 -3 5 982 259 328 77 36 chrX 52039293 52039540 -114610756 + RMER17C LTR ERVK 87 343 -67 5 982 289 235 29 0 chrX 52040100 52040168 -114610128 - B4A SINE B4 -38 254 185 5 982 355 183 99 39 chrX 52040509 52040660 -114609636 - RMER4B LTR ERVK -344 241 33 5 982 241 330 0 26 chrX 52040840 52040955 -114609341 + RMER15 LTR ERVL 302 413 -162 5 982 219 146 0 0 chrX 52040975 52041016 -114609280 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 5 982 621 198 67 22 chrX 52042100 52042234 -114608062 + B1_Mur1 SINE Alu 2 141 -8 5 982 552 192 9 9 chrX 52042914 52043019 -114607277 + RMER15 LTR ERVL 1 105 -470 5 982 2350 190 8 46 chrX 52043004 52043484 -114606812 + RMER15 LTR ERVL 47 508 -67 5 982 257 342 54 9 chrX 52043565 52043677 -114606619 - RSINE1 SINE B4 -48 117 1 5 982 651 262 19 39 chrX 52043765 52043920 -114606376 - RSINE1 SINE B4 -2 163 12 6 982 8750 60 3 1 chrX 52044329 52045785 -114604511 - L1Md_F3 LINE L1 -431 6153 4695 6 982 5168 66 16 0 chrX 52045783 52046525 -114603771 + L1_Mm LINE L1 3734 4487 -1396 6 982 2304 173 8 10 chrX 52046521 52047018 -114603278 - L1_Mm LINE L1 -3583 2300 1805 6 982 3567 161 16 21 chrX 52047019 52047633 -114602663 - ETnERV2-int LTR ERVK -302 7104 6494 6 982 1026 297 18 18 chrX 52047685 52048079 -114602217 - RNERVK23-int LTR ERVK -413 7804 7411 6 982 540 258 0 0 chrX 52047965 52048093 -114602203 - MMERGLN-int LTR ERV1 -363 7193 7066 6 982 287 277 0 0 chrX 52049093 52049176 -114601120 - MMERGLN-int LTR ERV1 -1543 6235 6153 6 982 382 262 15 37 chrX 52049104 52049239 -114601057 - RNERVK23-int LTR ERVK -1891 6326 6195 6 982 1047 304 48 41 chrX 52049615 52050403 -114599893 - RNERVK23-int LTR ERVK -2513 5704 4586 6 982 300 279 42 28 chrX 52050398 52050542 -114599754 - RNERVK23-int LTR ERVK -3779 4438 4293 6 982 1731 301 51 39 chrX 52050811 52052107 -114598189 - RNERVK23-int LTR ERVK -4558 3659 2343 6 982 3252 133 7 1 chrX 52055081 52055724 -114594572 - L1VL1 LINE L1 -2104 1594 947 6 982 1205 150 40 0 chrX 52055734 52055934 -114594362 - MTA_Mm LTR MaLR 0 396 189 6 982 4458 153 2 19 chrX 52055935 52056722 -114593574 - L1_Mm LINE L1 -560 5323 4550 6 982 384 97 0 16 chrX 52056730 52056793 -114593503 + L1Md_F LINE L1 1172 1233 -5383 7 982 212 167 0 0 chrX 52056793 52056835 -114593461 + A-rich Low_complexity Low_complexity 1 42 0 7 982 6351 140 5 34 chrX 52056844 52058068 -114592228 + L1Md_F LINE L1 1220 2408 -3475 7 982 40987 7 0 0 chrX 52058083 52064451 -114585845 - L1Md_A LINE L1 0 6582 214 7 982 7181 145 7 0 chrX 52064451 52065684 -114584612 + MusHAL1 LINE L1 1191 2431 -281 7 982 2170 196 28 21 chrX 52065712 52066145 -114584151 + L1_Mm LINE L1 5432 5867 -16 7 982 12107 140 11 18 chrX 52066152 52068207 -114582089 + RMER16-int LTR ERVK 2413 4453 -953 7 982 2735 56 9 3 chrX 52068207 52068550 -114581746 + IAPLTR4 LTR ERVK 1 345 0 7 982 1978 273 48 85 chrX 52068550 52069628 -114580668 + IAPLTR3-int LTR ERVK 1 954 -5867 7 982 1180 227 105 34 chrX 52069746 52070240 -114580056 + RMER16-int LTR ERVK 254 685 -5452 7 982 452 230 88 0 chrX 52070232 52070345 -114579951 + RMER16-int LTR ERVK 938 1060 -5077 7 982 338 256 0 55 chrX 52070358 52070449 -114579847 + ETnERV3-int LTR ERVK 2454 2539 -4867 7 982 6585 112 19 12 chrX 52070461 52071616 -114578680 + ETnERV3-int LTR ERVK 2735 3950 -3456 7 982 4878 148 27 72 chrX 52071618 52072642 -114577654 - RLTR13A3 LTR ERVK 0 978 1 7 982 34104 97 23 25 chrX 52072650 52074435 -114575861 - ETnERV3-int LTR ERVK -9 5799 4011 7 982 342 0 0 0 chrX 52074435 52074473 -114575823 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 8 982 34104 106 22 25 chrX 52074473 52078222 -114572074 - ETnERV3-int LTR ERVK -1798 4010 186 7 982 1042 154 11 16 chrX 52078386 52078571 -114571725 - ETnERV3-int LTR ERVK -5622 186 3 7 982 4803 152 27 72 chrX 52078573 52079597 -114570699 - RLTR13A3 LTR ERVK 0 978 1 7 982 1048 209 15 0 chrX 52079599 52079800 -114570496 + IAPLTR3-int LTR ERVK 4005 4208 -3198 8 982 386 238 11 35 chrX 52079837 52079967 -114570329 + IAPLTR3-int LTR ERVK 2357 2464 -2380 8 982 789 87 86 8 chrX 52079975 52080103 -114570193 + MMERVK10C-int LTR ERVK 4524 4661 -2920 8 982 5818 270 48 45 chrX 52080227 52082777 -114567519 + IAPLTR3-int LTR ERVK 3468 7324 -356 8 982 2461 89 27 3 chrX 52082777 52083114 -114567182 + IAPLTR4 LTR ERVK 1 345 0 8 982 526 281 62 5 chrX 52083969 52084182 -114566114 - B4A SINE B4 -38 254 1 8 982 337 161 12 36 chrX 52084474 52084517 -114565779 - RMER4B LTR ERVK -471 114 72 8 982 261 0 0 0 chrX 52084517 52084546 -114565750 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8 982 337 161 12 36 chrX 52084546 52084586 -114565710 - RMER4B LTR ERVK -514 71 35 8 982 364 316 60 64 chrX 52084768 52085001 -114565295 + RMER15 LTR ERVL 302 533 -42 8 982 515 225 69 42 chrX 52086010 52086154 -114564142 + B1_Mur1 SINE Alu 2 149 0 8 982 21 0 0 0 chrX 52086702 52086723 -114563573 + AT_rich Low_complexity Low_complexity 1 21 0 8 982 2153 199 28 78 chrX 52086814 52087343 -114562953 + RMER15 LTR ERVL 3 505 -70 8 982 667 256 19 38 chrX 52087626 52087784 -114562512 - RSINE1 SINE B4 -1 164 10 9 982 246 81 0 0 chrX 52087978 52088015 -114562281 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 9 982 1262 158 24 12 chrX 52088588 52088838 -114561458 - Lx2 LINE L1 -2 6995 6743 9 982 200 86 0 28 chrX 52088976 52089012 -114561284 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 9 982 481 313 28 32 chrX 52089554 52089772 -114560524 + RLTR45 LTR ERVK 266 482 0 9 982 329 404 0 9 chrX 52090045 52090160 -114560136 - PB1 SINE Alu -2 125 12 9 982 655 207 79 0 chrX 52090315 52090455 -114559841 + ORR1C2 LTR MaLR 232 382 -2 9 982 1842 203 22 3 chrX 52090536 52090891 -114559405 - MERVL_2A-int LTR ERVL -3505 2256 1895 9 982 4819 266 53 48 chrX 52090891 52092850 -114557446 + Lx6 LINE L1 5398 7362 -98 9 982 942 116 0 0 chrX 52092910 52093057 -114557239 + (GA)n Simple_repeat Simple_repeat 1 147 0 9 982 24 0 0 0 chrX 52093437 52093461 -114556835 + AT_rich Low_complexity Low_complexity 1 24 0 1 982 261 266 42 11 chrX 52094186 52094281 -114556015 - RMER19B LTR ERVK -2 900 803 1 982 3137 195 61 43 chrX 52094293 52095167 -114555129 + RMER17D LTR ERVK 1 889 0 1 982 2387 147 39 47 chrX 52095261 52095747 -114554549 + L1VL4 LINE L1 462 943 -5359 1 982 2540 140 9 5 chrX 52095734 52096179 -114554117 + MusHAL1 LINE L1 1023 1469 -1243 1 982 4363 216 52 47 chrX 52096201 52096380 -114553916 + MYSERV6-int LTR ERVK 2501 2676 -6283 1 982 8746 15 1 0 chrX 52096380 52097374 -114552922 + L1Md_A LINE L1 5587 6581 -1 1 982 4363 216 52 47 chrX 52097374 52098393 -114551903 + MYSERV6-int LTR ERVK 2677 3706 -5253 1 982 1002 94 0 32 chrX 52098397 52098583 -114551713 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1 982 2795 205 11 0 chrX 52098584 52099154 -114551142 - L1_Mm LINE L1 -276 5607 5032 1 982 449 217 139 42 chrX 52099323 52099467 -114550829 + RLTR20B1 LTR ERVK 13 170 -393 1 982 621 226 34 11 chrX 52099511 52099690 -114550606 + L1_Mur3 LINE L1 1706 1888 -3992 1 982 3700 233 63 16 chrX 52099700 52100585 -114549711 + Lx5 LINE L1 5828 6754 -296 1 982 23 54 0 0 chrX 52100818 52100855 -114549441 + AT_rich Low_complexity Low_complexity 1 37 0 1 982 478 236 18 0 chrX 52100914 52101024 -114549272 + Lx4A LINE L1 6719 6830 -228 1 982 5716 177 35 19 chrX 52101023 52102351 -114547945 + L1_Mus3 LINE L1 4601 5948 -690 1 982 6313 145 3 6 chrX 52102359 52103469 -114546827 + L1_Mus1 LINE L1 1502 2607 -3276 1 982 979 179 37 78 chrX 52103486 52103728 -114546568 - RLTR46 LTR ERVK -6 314 83 1 982 705 92 37 0 chrX 52103745 52103854 -114546442 - IAPEY3-int LTR ERVK 0 7680 7568 1 982 2530 61 0 3 chrX 52103878 52104191 -114546105 - RLTR10-int LTR ERVK -190 1797 1486 1 982 3016 167 3 84 chrX 52104193 52104834 -114545462 - IAPEY3-int LTR ERVK -147 7434 6846 1 982 4974 219 10 16 chrX 52104847 52106111 -114544185 - IAPEY3-int LTR ERVK -1882 5699 4417 1 982 3170 277 46 20 chrX 52106108 52107099 -114543197 - IAPEY3-int LTR ERVK -6129 1551 535 1 982 216 0 0 0 chrX 52107198 52107222 -114543074 + (A)n Simple_repeat Simple_repeat 1 24 0 1 982 1297 179 33 44 chrX 52107322 52107596 -114542700 - RLTR46 LTR ERVK -8 312 42 1 982 14315 156 27 19 chrX 52107609 52108536 -114541760 + L1_Mus1 LINE L1 2615 3532 -2351 1 982 2382 139 7 17 chrX 52108536 52108945 -114541351 - RLTR9E LTR ERVK -4 405 1 1 982 14315 156 27 19 chrX 52108945 52108957 -114541339 + L1_Mus1 LINE L1 3533 3533 -2350 1 982 1951 132 138 28 chrX 52108957 52109385 -114540911 + IAPLTR2_Mm LTR ERVK 1 475 0 1 982 14315 156 27 19 chrX 52109385 52111089 -114539207 + L1_Mus1 LINE L1 3533 5283 -600 1 982 8779 9 1 0 chrX 52111089 52112075 -114538221 + L1Md_A LINE L1 5596 6582 0 1 982 2649 146 9 48 chrX 52112075 52112175 -114538121 + L1_Mus1 LINE L1 5293 5382 -501 1 982 6113 117 8 7 chrX 52112172 52113087 -114537209 + L1_Mus1 LINE L1 5652 6567 0 1 982 408 82 0 0 chrX 52113218 52113279 -114537017 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 982 470 286 70 14 chrX 52113363 52113505 -114536791 + B3 SINE B2 3 152 -64 1 982 236 246 0 90 chrX 52113537 52113604 -114536692 + ID_B1 SINE B4 94 154 -70 1 982 243 374 20 10 chrX 52113594 52113694 -114536602 + B3 SINE B2 107 207 -9 1 982 244 372 10 0 chrX 52114569 52114671 -114535625 - PB1D10 SINE Alu -14 103 1 1 982 354 136 17 0 chrX 52115246 52115305 -114534991 + HAL1-3A_ME LINE L1 1968 2027 -831 1 982 396 168 10 19 chrX 52115306 52115409 -114534887 + (TA)n Simple_repeat Simple_repeat 2 103 0 1 982 208 147 0 0 chrX 52115573 52115607 -114534689 + (T)n Simple_repeat Simple_repeat 1 34 0 1 982 12386 151 7 12 chrX 52116054 52119022 -114531274 - L1_Mus3 LINE L1 -3 6635 3687 1 982 510 263 102 66 chrX 52119057 52119156 -114531140 + B4A SINE B4 115 222 -70 1 982 1016 97 0 52 chrX 52119156 52119309 -114530987 + B1_Mus1 SINE Alu 2 146 -2 1 982 927 0 0 0 chrX 52119309 52119412 -114530884 + (TA)n Simple_repeat Simple_repeat 1 103 0 1 982 402 21 0 0 chrX 52119413 52119460 -114530836 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 982 510 263 102 66 chrX 52119460 52119524 -114530772 + B4A SINE B4 223 286 -6 1 982 831 293 0 0 chrX 52119724 52119905 -114530391 + B3 SINE B2 2 182 -34 1 982 24 0 0 0 chrX 52120963 52120987 -114529309 + AT_rich Low_complexity Low_complexity 1 24 0 1 982 474 18 0 0 chrX 52121283 52121338 -114528958 + (GA)n Simple_repeat Simple_repeat 1 55 0 1 982 26 50 0 0 chrX 52121603 52121643 -114528653 + AT_rich Low_complexity Low_complexity 1 40 0 1 982 23 33 0 0 chrX 52121661 52121691 -114528605 + AT_rich Low_complexity Low_complexity 1 30 0 1 982 21 36 0 0 chrX 52122606 52122634 -114527662 + AT_rich Low_complexity Low_complexity 1 28 0 1 982 4719 155 33 8 chrX 52122636 52123482 -114526814 - Lx LINE L1 -1 6653 5787 1 982 2550 161 24 0 chrX 52123483 52123975 -114526321 - L1_Mur2 LINE L1 -1127 4750 4247 1 982 3557 198 34 51 chrX 52123978 52125424 -114524872 - L1VL2 LINE L1 -2199 1416 2 1 982 586 283 132 6 chrX 52125430 52125604 -114524692 - L1VL2 LINE L1 -6063 272 77 1 982 561 335 84 19 chrX 52125739 52126001 -114524295 - B4A SINE B4 -3 289 11 1 982 921 241 19 0 chrX 52126242 52126449 -114523847 - B3 SINE B2 -5 211 1 1 982 275 49 0 24 chrX 52126458 52126500 -114523796 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1 982 419 306 58 0 chrX 52126632 52126753 -114523543 - B1F SINE Alu -1 148 21 1 982 455 287 0 0 chrX 52126811 52126919 -114523377 - B3 SINE B2 -11 205 98 1 982 3645 154 23 25 chrX 52127775 52128466 -114521830 - YREP_Mm Unknown Unknown -35 1777 1088 1 982 578 61 0 0 chrX 52128600 52128682 -114521614 - YREP_Mm Unknown Unknown -745 1067 986 1 982 345 347 154 35 chrX 52128687 52128914 -114521382 - L2 LINE L2 -1119 2300 2047 1 982 438 351 45 0 chrX 52129123 52129257 -114521039 + B4A SINE B4 131 270 -22 1 982 281 312 49 24 chrX 52129748 52129912 -114520384 - L2 LINE L2 -1758 1661 1494 1 983 4373 156 3 18 chrX 52181231 52182014 -114468282 - L1_Mm LINE L1 -563 5320 4550 1 983 394 117 7 14 chrX 52182022 52182113 -114468183 + L1Md_F LINE L1 1172 1264 -2651 1 983 243 191 0 0 chrX 52182113 52182176 -114468120 + A-rich Low_complexity Low_complexity 1 63 0 1 983 13485 148 2 16 chrX 52182176 52184619 -114465677 + L1Md_F LINE L1 1252 3659 -2224 1 983 2170 196 28 21 chrX 52184616 52185049 -114465247 + L1_Mm LINE L1 5432 5867 -16 1 983 12064 140 12 16 chrX 52185054 52187105 -114463191 + RMER16-int LTR ERVK 2413 4456 -950 1 983 2698 67 6 3 chrX 52187105 52187449 -114462847 + IAPLTR4 LTR ERVK 1 345 0 1 983 2017 268 62 85 chrX 52187449 52188406 -114461890 + IAPLTR3-int LTR ERVK 1 935 -5886 1 983 1202 228 104 38 chrX 52188655 52189150 -114461146 + RMER16-int LTR ERVK 254 685 -5452 1 983 437 239 88 0 chrX 52189142 52189255 -114461041 + RMER16-int LTR ERVK 938 1060 -5077 1 983 6392 142 95 10 chrX 52189268 52190758 -114459538 + ETnERV3-int LTR ERVK 2454 4271 -3135 1 983 544 187 12 0 chrX 52190760 52190879 -114459417 + ETnERV3-int LTR ERVK 2357 2464 -2380 1 983 807 102 35 48 chrX 52190896 52191041 -114459255 + MMERVK10C-int LTR ERVK 4530 4672 -2909 1 983 5687 261 53 49 chrX 52191148 52193691 -114456605 + ETnERV3-int LTR ERVK 3468 7329 -351 1 983 2623 84 0 3 chrX 52193691 52194037 -114456259 + IAPLTR4 LTR ERVK 1 345 0 1 983 1609 109 0 8 chrX 52194037 52194277 -114456019 + RMER16-int LTR ERVK 4451 4688 -718 1 983 3277 220 61 69 chrX 52194307 52196636 -114453660 + ETnERV2-int LTR ERVK 802 4088 -3318 1 983 10858 92 5 4 chrX 52196648 52198860 -114451436 - L1Md_F2 LINE L1 -2 6580 4368 1 983 5940 112 25 2 chrX 52198860 52199792 -114450504 + L1Md_F2 LINE L1 3361 4313 -1570 1 983 1142 204 86 58 chrX 52199804 52200419 -114449877 + ETnERV2-int LTR ERVK 4616 4995 -2249 1 983 310 311 65 80 chrX 52200419 52200744 -114449552 - RLTR46 LTR ERVK 0 320 1 1 983 1607 201 5 49 chrX 52200746 52201134 -114449162 + ETnERV2-int LTR ERVK 2723 3093 -1751 1 983 596 205 40 20 chrX 52201133 52201282 -114449014 + ETnERV2-int LTR ERVK 6096 6247 -1159 1 983 1189 175 20 0 chrX 52201316 52201516 -114448780 + ETnERV2-int LTR ERVK 6222 6425 -981 1 983 354 153 27 14 chrX 52201728 52201801 -114448495 + ETnERV2-int LTR ERVK 7331 7404 -2 1 983 2252 148 10 35 chrX 52201802 52202207 -114448089 + RLTR9D LTR ERVK 1 395 -8 1 983 3716 136 43 0 chrX 52202213 52202522 -114447774 + RMER16-int LTR ERVK 4769 5082 -324 1 983 468 0 0 0 chrX 52202522 52202574 -114447722 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 983 3716 136 43 0 chrX 52202574 52202875 -114447421 + RMER16-int LTR ERVK 5083 5404 -2 1 983 2821 147 18 4 chrX 52202877 52203358 -114446938 + RMER16 LTR ERVK 1 532 -1 1 983 250 208 0 0 chrX 52203359 52203412 -114446884 + L1M LINE L1 5366 5418 -879 1 983 2353 101 151 98 chrX 52203616 52204067 -114446229 + MT2C_Mm LTR ERVL 1 475 0 1 983 3467 117 14 0 chrX 52204067 52204578 -114445718 + MERVL-int LTR ERVL 1 518 -4967 1 983 308 121 17 0 chrX 52204581 52204639 -114445657 + L1_Mus2 LINE L1 6508 6566 0 1 983 241 335 56 34 chrX 52204668 52204937 -114445359 + Lx9 LINE L1 7247 7521 -123 1 983 350 338 73 6 chrX 52204937 52205101 -114445195 - HAL1 LINE L1 -929 1578 1404 1 983 1695 219 28 3 chrX 52205899 52206488 -114443808 + L1_Mur2 LINE L1 907 1514 -4363 1 983 945 114 7 7 chrX 52206489 52206630 -114443666 + B1_Mus1 SINE Alu 2 142 -6 1 983 1048 245 36 26 chrX 52206662 52207047 -114443249 + L1_Mur2 LINE L1 1497 1885 -3995 1 983 1242 198 41 2 chrX 52207061 52207322 -114442974 + Lx5 LINE L1 5826 6098 -1598 1 983 6957 32 6 0 chrX 52207353 52208170 -114442126 - RLTR13B2 LTR ERVK 0 822 1 1 983 34034 105 36 30 chrX 52208184 52209887 -114440409 - ETnERV3-int LTR ERVK -28 5780 4010 1 983 240 35 0 0 chrX 52209887 52209916 -114440380 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1 983 34034 138 34 29 chrX 52209916 52214358 -114435938 - ETnERV3-int LTR ERVK -1799 4009 188 1 983 307 277 0 0 chrX 52214597 52214698 -114435598 - ETnERV3-int LTR ERVK -6874 379 279 1 983 1077 106 21 32 chrX 52214770 52214956 -114435340 - ETnERV3-int LTR ERVK -5622 186 3 1 983 6594 52 7 0 chrX 52214958 52215774 -114434522 - RLTR13B2 LTR ERVK 0 822 1 1 983 2556 227 25 18 chrX 52215774 52216380 -114433916 + Lx4B LINE L1 6169 6778 -280 1 983 21 57 0 0 chrX 52216380 52216415 -114433881 + AT_rich Low_complexity Low_complexity 1 35 0 1 983 17178 166 13 9 chrX 52216634 52218073 -114432223 + L1_Mus1 LINE L1 2104 3528 -2355 1 983 2479 139 7 17 chrX 52218073 52218482 -114431814 - RLTR9E LTR ERVK -4 405 1 1 983 17178 166 13 9 chrX 52218482 52220309 -114429987 + L1_Mus1 LINE L1 3529 5382 -501 1 983 4005 109 5 17 chrX 52220306 52220904 -114429392 + L1_Mus1 LINE L1 5652 6242 -325 1 983 417 285 40 24 chrX 52220904 52221030 -114429266 - B3 SINE B2 -88 128 1 1 983 313 358 67 0 chrX 52221174 52221294 -114429002 - B1F SINE Alu -1 148 21 1 983 457 287 0 0 chrX 52221349 52221457 -114428839 - B3 SINE B2 -11 205 98 1 983 4097 147 28 24 chrX 52222343 52223131 -114427165 - YREP_Mm Unknown Unknown -36 1776 986 1 983 298 335 171 43 chrX 52223176 52223363 -114426933 - L2 LINE L2 -1162 2257 2047 1 983 468 358 46 7 chrX 52223572 52223724 -114426572 + B4A SINE B4 131 288 -4 1 983 6125 103 0 7 chrX 52224257 52225153 -114425143 - L1Md_F2 LINE L1 -366 5517 4628 1 983 589 129 0 0 chrX 52225141 52225226 -114425070 + L1Md_F2 LINE L1 5502 5586 -297 1 983 7517 58 18 2 chrX 52225226 52226206 -114424090 + L1Md_F2 LINE L1 5587 6582 0 1 983 2610 79 6 3 chrX 52226904 52227248 -114423048 + IAPLTR4 LTR ERVK 1 345 0 1 983 364 277 9 38 chrX 52227262 52227367 -114422929 + IAPLTR3-int LTR ERVK 16 117 -6704 1 983 517 131 9 70 chrX 52227367 52227482 -114422814 + IAPLTR3-int LTR ERVK 834 941 -5880 1 983 353 186 0 92 chrX 52227471 52227601 -114422695 + IAPLTR3-int LTR ERVK 835 952 -6629 1 983 1135 206 94 63 chrX 52227723 52227802 -114422494 + ETnERV3-int LTR ERVK 251 326 -5080 1 983 387 0 0 0 chrX 52227802 52227845 -114422451 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 983 1135 225 95 61 chrX 52227845 52228265 -114422031 + ETnERV3-int LTR ERVK 327 667 -5470 1 983 457 183 92 0 chrX 52228264 52228384 -114421912 + ETnERV3-int LTR ERVK 1719 1849 -5557 1 983 1044 205 130 49 chrX 52228441 52228748 -114421548 - IAPEY3_LTR LTR ERVK 0 332 1 1 983 6588 118 17 9 chrX 52228816 52229966 -114420330 + ETnERV3-int LTR ERVK 2735 3950 -3456 1 983 4997 141 27 73 chrX 52229968 52230993 -114419303 - RLTR13A3 LTR ERVK 0 978 1 1 983 34735 102 14 25 chrX 52231001 52236582 -114413714 - ETnERV3-int LTR ERVK -9 5799 186 1 983 971 170 11 21 chrX 52236745 52236931 -114413365 - ETnERV3-int LTR ERVK -5622 186 3 1 983 4811 151 27 73 chrX 52236933 52237958 -114412338 - RLTR13A3 LTR ERVK 0 978 1 1 983 1057 204 15 0 chrX 52237960 52238161 -114412135 + IAPLTR3-int LTR ERVK 4005 4208 -3198 1 983 362 247 9 33 chrX 52238198 52238328 -114411968 + IAPLTR3-int LTR ERVK 2357 2464 -2380 1 983 735 102 55 8 chrX 52238335 52238463 -114411833 + MMERVK10C-int LTR ERVK 4528 4661 -2920 1 983 5656 268 49 45 chrX 52238587 52241135 -114409161 + IAPLTR3-int LTR ERVK 3468 7329 -351 1 983 2573 93 0 3 chrX 52241135 52241481 -114408815 + IAPLTR4 LTR ERVK 1 345 0 1 983 531 316 34 0 chrX 52242336 52242513 -114407783 - B4A SINE B4 -38 254 72 1 983 324 162 24 36 chrX 52242840 52242883 -114407413 - RMER4B LTR ERVK -471 114 72 2 983 261 0 0 0 chrX 52242883 52242912 -114407384 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 983 324 162 24 36 chrX 52242912 52242951 -114407345 - RMER4B LTR ERVK -514 71 35 2 983 364 310 69 65 chrX 52243133 52243364 -114406932 + RMER15 LTR ERVL 302 533 -42 2 983 515 225 69 42 chrX 52244374 52244518 -114405778 + B1_Mur1 SINE Alu 2 149 0 2 983 21 0 0 0 chrX 52245066 52245087 -114405209 + AT_rich Low_complexity Low_complexity 1 21 0 2 983 2153 199 28 78 chrX 52245178 52245707 -114404589 + RMER15 LTR ERVL 3 505 -70 2 983 659 263 19 38 chrX 52245990 52246148 -114404148 - RSINE1 SINE B4 -1 164 10 2 983 180 0 0 0 chrX 52246351 52246371 -114403925 + (T)n Simple_repeat Simple_repeat 1 20 0 2 983 1240 162 24 12 chrX 52246944 52247194 -114403102 - Lx2 LINE L1 -2 6995 6743 2 983 200 86 0 28 chrX 52247332 52247368 -114402928 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 2 983 481 313 28 32 chrX 52247910 52248128 -114402168 + RLTR45 LTR ERVK 266 482 0 2 983 343 395 0 9 chrX 52248389 52248504 -114401792 - PB1 SINE Alu -2 125 12 2 983 655 207 79 0 chrX 52248660 52248800 -114401496 + ORR1C2 LTR MaLR 232 382 -2 2 983 1842 203 22 3 chrX 52248881 52249236 -114401060 - MERVL_2A-int LTR ERVL -3505 2256 1895 2 983 4859 263 54 49 chrX 52249236 52251195 -114399101 + Lx6 LINE L1 5398 7362 -98 2 983 990 121 0 0 chrX 52251255 52251412 -114398884 + (GA)n Simple_repeat Simple_repeat 1 157 0 2 983 24 0 0 0 chrX 52251792 52251816 -114398480 + AT_rich Low_complexity Low_complexity 1 24 0 2 983 234 266 42 21 chrX 52252541 52252637 -114397659 - RMER19B LTR ERVK -2 900 803 2 983 3146 195 61 43 chrX 52252649 52253523 -114396773 + RMER17D LTR ERVK 1 889 0 2 983 2384 149 37 45 chrX 52253617 52254103 -114396193 + L1VL4 LINE L1 462 943 -5359 2 983 2560 138 9 5 chrX 52254090 52254535 -114395761 + MusHAL1 LINE L1 1023 1469 -1243 2 983 4363 216 52 47 chrX 52254557 52254736 -114395560 + MYSERV6-int LTR ERVK 2501 2676 -6283 2 983 8782 15 0 0 chrX 52254736 52255731 -114394565 + L1Md_A LINE L1 5587 6581 -1 2 983 4363 216 52 47 chrX 52255731 52256750 -114393546 + MYSERV6-int LTR ERVK 2677 3706 -5253 2 983 1121 83 18 0 chrX 52256752 52256969 -114393327 + (TCTA)n Simple_repeat Simple_repeat 1 220 0 2 983 2795 205 11 0 chrX 52256969 52257539 -114392757 - L1_Mm LINE L1 -276 5607 5032 2 983 449 217 139 42 chrX 52257708 52257852 -114392444 + RLTR20B1 LTR ERVK 13 170 -393 2 983 621 226 34 11 chrX 52257896 52258075 -114392221 + L1_Mur3 LINE L1 1706 1888 -3992 2 983 3700 233 63 16 chrX 52258085 52258970 -114391326 + Lx5 LINE L1 5828 6754 -296 2 983 23 54 0 0 chrX 52259203 52259240 -114391056 + AT_rich Low_complexity Low_complexity 1 37 0 2 983 463 246 18 0 chrX 52259299 52259409 -114390887 + Lx4A LINE L1 6719 6830 -228 2 983 5702 177 34 20 chrX 52259408 52260739 -114389557 + L1_Mus3 LINE L1 4601 5948 -690 2 983 6271 145 6 5 chrX 52260747 52261852 -114388444 + L1_Mus1 LINE L1 1502 2607 -3276 2 983 979 179 37 78 chrX 52261869 52262111 -114388185 - RLTR46 LTR ERVK -6 314 83 2 983 705 92 37 0 chrX 52262128 52262237 -114388059 - IAPEY3-int LTR ERVK 0 7680 7568 2 983 2498 67 0 3 chrX 52262261 52262574 -114387722 - RLTR10-int LTR ERVK -190 1797 1486 2 983 2993 170 3 84 chrX 52262576 52263217 -114387079 - IAPEY3-int LTR ERVK -147 7434 6846 2 983 4985 219 10 16 chrX 52263230 52264494 -114385802 - IAPEY3-int LTR ERVK -1882 5699 4417 2 983 3162 277 46 20 chrX 52264491 52265482 -114384814 - IAPEY3-int LTR ERVK -6129 1551 535 2 983 1297 179 33 44 chrX 52265699 52265973 -114384323 - RLTR46 LTR ERVK -8 312 42 2 983 14321 156 27 20 chrX 52265986 52266913 -114383383 + L1_Mus1 LINE L1 2615 3532 -2351 2 983 2369 142 7 17 chrX 52266913 52267322 -114382974 - RLTR9E LTR ERVK -4 405 1 2 983 14321 156 27 20 chrX 52267322 52267334 -114382962 + L1_Mus1 LINE L1 3533 3533 -2350 2 983 1951 132 138 28 chrX 52267334 52267762 -114382534 + IAPLTR2_Mm LTR ERVK 1 475 0 2 983 14321 156 27 20 chrX 52267762 52269466 -114380830 + L1_Mus1 LINE L1 3533 5283 -600 2 983 8818 9 0 0 chrX 52269466 52270453 -114379843 + L1Md_A LINE L1 5596 6582 0 2 983 14321 156 27 20 chrX 52270453 52270555 -114379741 + L1_Mus1 LINE L1 5284 5382 -501 2 983 6112 117 8 7 chrX 52270552 52271467 -114378829 + L1_Mus1 LINE L1 5652 6567 0 2 983 426 79 0 0 chrX 52271598 52271661 -114378635 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 983 485 279 70 14 chrX 52271745 52271887 -114378409 + B3 SINE B2 3 152 -64 2 983 236 246 0 90 chrX 52271919 52271986 -114378310 + ID_B1 SINE B4 94 154 -70 2 983 235 374 20 10 chrX 52271976 52272076 -114378220 + B3 SINE B2 107 207 -9 2 983 244 372 10 0 chrX 52272951 52273053 -114377243 - PB1D10 SINE Alu -14 103 1 2 983 354 136 17 0 chrX 52273628 52273687 -114376609 + HAL1-3A_ME LINE L1 1968 2027 -831 2 983 366 180 10 20 chrX 52273687 52273789 -114376507 + (TA)n Simple_repeat Simple_repeat 2 102 0 2 983 208 147 0 0 chrX 52273953 52273987 -114376309 + (T)n Simple_repeat Simple_repeat 1 34 0 2 983 12552 150 8 4 chrX 52274434 52277370 -114372926 - L1_Mus3 LINE L1 -3 6635 3687 2 983 500 263 101 77 chrX 52277405 52277504 -114372792 + B4A SINE B4 115 222 -70 2 983 1016 97 0 52 chrX 52277504 52277657 -114372639 + B1_Mus1 SINE Alu 2 146 -2 2 983 531 0 0 0 chrX 52277657 52277716 -114372580 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 983 345 47 0 0 chrX 52277719 52277762 -114372534 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 983 500 263 101 77 chrX 52277762 52277826 -114372470 + B4A SINE B4 223 286 -6 2 983 831 293 0 0 chrX 52278026 52278207 -114372089 + B3 SINE B2 2 182 -34 2 983 24 0 0 0 chrX 52279265 52279289 -114371007 + AT_rich Low_complexity Low_complexity 1 24 0 2 983 654 13 0 0 chrX 52279585 52279660 -114370636 + (GA)n Simple_repeat Simple_repeat 1 75 0 2 983 26 50 0 0 chrX 52279925 52279965 -114370331 + AT_rich Low_complexity Low_complexity 1 40 0 2 983 23 33 0 0 chrX 52279983 52280013 -114370283 + AT_rich Low_complexity Low_complexity 1 30 0 2 983 21 36 0 0 chrX 52280928 52280956 -114369340 + AT_rich Low_complexity Low_complexity 1 28 0 2 983 4692 156 33 8 chrX 52280958 52281804 -114368492 - Lx LINE L1 -1 6653 5787 2 983 2550 161 24 0 chrX 52281805 52282297 -114367999 - L1_Mur2 LINE L1 -1127 4750 4247 2 983 3554 193 38 53 chrX 52282300 52283745 -114366551 - L1VL2 LINE L1 -2199 1416 2 2 983 586 283 132 6 chrX 52283751 52283925 -114366371 - L1VL2 LINE L1 -6063 272 77 2 983 580 331 84 19 chrX 52284060 52284322 -114365974 - B4A SINE B4 -3 289 11 2 983 921 241 19 0 chrX 52284562 52284769 -114365527 - B3 SINE B2 -5 211 1 2 983 275 49 0 24 chrX 52284778 52284820 -114365476 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 2 983 395 314 58 0 chrX 52284952 52285073 -114365223 - B1F SINE Alu -1 148 21 2 983 455 287 0 0 chrX 52285131 52285239 -114365057 - B3 SINE B2 -11 205 98 2 983 3645 154 23 25 chrX 52286095 52286786 -114363510 - YREP_Mm Unknown Unknown -35 1777 1088 2 983 578 61 0 0 chrX 52286917 52286999 -114363297 - YREP_Mm Unknown Unknown -745 1067 986 2 983 328 311 186 62 chrX 52287004 52287230 -114363066 - L2 LINE L2 -1119 2300 2047 2 983 438 351 45 0 chrX 52287439 52287573 -114362723 + B4A SINE B4 131 270 -22 2 983 277 312 49 24 chrX 52288065 52288229 -114362067 - L2 LINE L2 -1758 1661 1494 2 983 5661 151 3 12 chrX 52289569 52290537 -114359759 - Lx3A LINE L1 -7 6974 6016 2 983 29706 7 0 0 chrX 52290878 52294258 -114356038 + L1Md_A LINE L1 2207 5586 -297 2 983 8896 8 0 0 chrX 52294258 52295251 -114355045 + L1Md_A LINE L1 5587 6579 -3 2 983 245 328 77 36 chrX 52295392 52295639 -114354657 + RMER17C LTR ERVK 87 343 -67 2 983 289 235 29 0 chrX 52296199 52296267 -114354029 - B4A SINE B4 -38 254 185 2 983 355 187 95 38 chrX 52296608 52296766 -114353530 - RMER4B LTR ERVK -344 241 26 2 983 233 330 0 26 chrX 52296938 52297053 -114353243 + RMER15 LTR ERVL 302 413 -162 2 983 219 146 0 0 chrX 52297072 52297113 -114353183 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2 984 615 198 67 22 chrX 52298195 52298329 -114351967 + B1_Mur1 SINE Alu 2 141 -8 2 984 537 192 9 9 chrX 52299009 52299114 -114351182 + RMER15 LTR ERVL 1 105 -470 2 984 2318 190 8 46 chrX 52299099 52299579 -114350717 + RMER15 LTR ERVL 47 508 -67 2 984 250 342 54 9 chrX 52299660 52299772 -114350524 - RSINE1 SINE B4 -48 117 1 2 984 646 262 19 39 chrX 52299860 52300015 -114350281 - RSINE1 SINE B4 -2 163 12 2 984 9201 58 3 1 chrX 52300424 52301880 -114348416 - L1Md_F3 LINE L1 -431 6153 4695 2 984 5437 65 16 0 chrX 52301878 52302620 -114347676 + L1_Mm LINE L1 3734 4487 -1396 2 984 2443 175 8 10 chrX 52302616 52303113 -114347183 - L1_Mm LINE L1 -3583 2300 1805 2 984 3764 163 16 21 chrX 52303114 52303728 -114346568 - ETnERV2-int LTR ERVK -302 7104 6494 2 984 1164 325 25 21 chrX 52303780 52304337 -114345959 - RNERVK23-int LTR ERVK -413 7804 7246 2 984 311 277 0 0 chrX 52305188 52305271 -114345025 - RLTR6-int LTR ERV1 -1543 6235 6153 2 984 425 265 15 36 chrX 52305197 52305334 -114344962 - RNERVK23-int LTR ERVK -1889 6328 6195 2 984 1233 304 48 41 chrX 52305710 52306498 -114343798 - RNERVK23-int LTR ERVK -2513 5704 4586 2 984 2174 299 60 53 chrX 52306493 52308202 -114342094 - RNERVK23-int LTR ERVK -2512 4309 2696 2 984 277 306 30 43 chrX 52310341 52310505 -114339791 - RLTR45-int LTR ERVK -6914 330 169 2 984 3427 133 7 1 chrX 52311179 52311822 -114338474 - L1VL1 LINE L1 -2104 1594 947 2 984 1205 116 17 0 chrX 52311832 52312013 -114338283 - MTB LTR MaLR 0 400 217 2 984 4616 150 2 17 chrX 52312014 52312819 -114337477 - L1_Mm LINE L1 -541 5342 4550 2 984 399 81 0 16 chrX 52312827 52312890 -114337406 + L1Md_F LINE L1 1172 1233 -5383 2 984 186 156 0 0 chrX 52312890 52312935 -114337361 + A-rich Low_complexity Low_complexity 1 45 0 2 984 13498 150 2 15 chrX 52312944 52315416 -114334880 + L1Md_F LINE L1 1220 3659 -2224 2 984 2170 196 28 21 chrX 52315413 52315846 -114334450 + L1Md_F LINE L1 5432 5867 -16 2 984 12092 140 11 17 chrX 52315851 52317904 -114332392 + RMER16-int LTR ERVK 2413 4453 -953 2 984 2735 56 9 3 chrX 52317904 52318247 -114332049 + IAPLTR4 LTR ERVK 1 345 0 2 984 820 217 5 36 chrX 52318247 52318443 -114331853 + IAPLTR3-int LTR ERVK 1 190 -6631 2 984 421 287 21 14 chrX 52318475 52318620 -114331676 + IAPLTR3-int LTR ERVK 337 482 -6339 2 984 969 202 7 107 chrX 52318670 52319061 -114331235 + IAPLTR3-int LTR ERVK 689 954 -5867 2 984 1208 230 103 34 chrX 52319179 52319674 -114330622 + RMER16-int LTR ERVK 254 685 -5452 2 984 452 230 88 0 chrX 52319666 52319779 -114330517 + RMER16-int LTR ERVK 938 1060 -5077 2 984 342 256 0 55 chrX 52319792 52319883 -114330413 + ETnERV3-int LTR ERVK 2454 2539 -4867 2 984 6589 112 19 15 chrX 52319896 52321053 -114329243 + ETnERV3-int LTR ERVK 2736 3950 -3456 2 984 4910 146 27 72 chrX 52321055 52322079 -114328217 - RLTR13A3 LTR ERVK 0 978 1 2 984 34158 97 23 25 chrX 52322087 52323873 -114326423 - ETnERV3-int LTR ERVK -9 5799 4011 2 984 378 0 0 0 chrX 52323873 52323915 -114326381 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 2 984 34158 106 22 24 chrX 52323915 52327662 -114322634 - ETnERV3-int LTR ERVK -1798 4010 186 2 984 992 144 16 32 chrX 52327826 52328013 -114322283 - ETnERV3-int LTR ERVK -5622 186 3 2 984 4801 152 27 72 chrX 52328015 52329039 -114321257 - RLTR13A3 LTR ERVK 0 978 1 2 984 1047 204 15 0 chrX 52329041 52329242 -114321054 + IAPLTR3-int LTR ERVK 4005 4208 -3198 2 984 386 238 11 35 chrX 52329279 52329409 -114320887 + IAPLTR3-int LTR ERVK 2357 2464 -2380 2 984 784 102 47 8 chrX 52329416 52329545 -114320751 + MMERVK10C-int LTR ERVK 4528 4661 -2920 3 984 5821 269 48 45 chrX 52329669 52332219 -114318077 + IAPLTR3-int LTR ERVK 3468 7324 -356 2 984 2461 89 27 3 chrX 52332219 52332556 -114317740 + IAPLTR4 LTR ERVK 1 345 0 2 984 526 320 28 0 chrX 52333411 52333589 -114316707 - B4A SINE B4 -38 254 72 3 984 324 162 24 36 chrX 52333916 52333959 -114316337 - RMER4B LTR ERVK -471 114 72 3 984 261 0 0 0 chrX 52333959 52333988 -114316308 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 984 324 162 24 36 chrX 52333988 52334027 -114316269 - RMER4B LTR ERVK -514 71 35 3 984 354 320 56 64 chrX 52334211 52334445 -114315851 + RMER15 LTR ERVL 302 533 -42 3 984 515 225 69 42 chrX 52335448 52335592 -114314704 + B1_Mur1 SINE Alu 2 149 0 3 984 21 0 0 0 chrX 52336140 52336161 -114314135 + AT_rich Low_complexity Low_complexity 1 21 0 3 984 2108 203 28 78 chrX 52336252 52336781 -114313515 + RMER15 LTR ERVL 3 505 -70 3 984 659 263 19 38 chrX 52337064 52337222 -114313074 - RSINE1 SINE B4 -1 164 10 3 984 1215 166 24 20 chrX 52338010 52338262 -114312034 - Lx2 LINE L1 -2 6995 6743 3 984 200 86 0 28 chrX 52338400 52338436 -114311860 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 3 984 481 313 28 32 chrX 52338978 52339196 -114311100 + RLTR45 LTR ERVK 266 482 0 3 984 343 395 0 9 chrX 52339457 52339572 -114310724 - PB1 SINE Alu -2 125 12 3 984 655 207 79 0 chrX 52339727 52339867 -114310429 + ORR1C2 LTR MaLR 232 382 -2 3 984 1842 203 22 3 chrX 52339948 52340303 -114309993 - MERVL_2A-int LTR ERVL -3505 2256 1895 3 984 4818 266 53 48 chrX 52340303 52342262 -114308034 + Lx6 LINE L1 5398 7362 -98 3 984 1050 107 0 0 chrX 52342322 52342481 -114307815 + (GA)n Simple_repeat Simple_repeat 1 159 0 3 984 24 0 0 0 chrX 52342861 52342885 -114307411 + AT_rich Low_complexity Low_complexity 1 24 0 3 984 261 266 42 11 chrX 52343610 52343705 -114306591 - RMER19B LTR ERVK -2 900 803 3 984 3146 195 61 43 chrX 52343717 52344591 -114305705 + RMER17D LTR ERVK 1 889 0 3 984 2384 149 37 45 chrX 52344685 52345171 -114305125 + L1VL4 LINE L1 462 943 -5359 3 984 2560 138 9 5 chrX 52345158 52345603 -114304693 + MusHAL1 LINE L1 1023 1469 -1243 3 984 827 216 0 6 chrX 52345625 52345802 -114304494 + MYSERV6-int LTR ERVK 2501 2676 -6283 3 984 8816 14 0 0 chrX 52345804 52346800 -114303496 + L1Md_A LINE L1 5587 6582 0 3 984 529 149 11 0 chrX 52346806 52346900 -114303396 + L1_Mus1 LINE L1 5288 5382 -501 3 984 6079 119 8 7 chrX 52346897 52347812 -114302484 + L1_Mus1 LINE L1 5652 6567 0 3 984 480 72 0 0 chrX 52347943 52348012 -114302284 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 984 470 286 70 14 chrX 52348096 52348238 -114302058 + B3 SINE B2 3 152 -64 3 984 236 246 0 90 chrX 52348270 52348337 -114301959 + ID_B1 SINE B4 94 154 -70 3 984 243 374 20 10 chrX 52348327 52348427 -114301869 + B3 SINE B2 107 207 -9 3 984 244 372 10 0 chrX 52349302 52349404 -114300892 - PB1D10 SINE Alu -14 103 1 3 984 353 118 0 0 chrX 52349979 52350030 -114300266 + HAL1-3A_ME LINE L1 1968 2018 -840 3 984 375 178 10 19 chrX 52350033 52350136 -114300160 + (TA)n Simple_repeat Simple_repeat 2 103 0 3 984 208 147 0 0 chrX 52350300 52350334 -114299962 + (T)n Simple_repeat Simple_repeat 1 34 0 3 984 12642 148 8 4 chrX 52350781 52353718 -114296578 - L1_Mus3 LINE L1 -3 6635 3687 3 984 510 263 102 66 chrX 52353753 52353852 -114296444 + B4A SINE B4 115 222 -70 3 984 1016 97 0 52 chrX 52353852 52354005 -114296291 + B1_Mus1 SINE Alu 2 146 -2 3 984 531 0 0 0 chrX 52354005 52354064 -114296232 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 984 312 27 0 0 chrX 52354065 52354102 -114296194 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 984 510 263 102 66 chrX 52354102 52354166 -114296130 + B4A SINE B4 223 286 -6 3 984 831 293 0 0 chrX 52354366 52354547 -114295749 + B3 SINE B2 2 182 -34 3 984 24 0 0 0 chrX 52355605 52355629 -114294667 + AT_rich Low_complexity Low_complexity 1 24 0 3 984 654 13 0 0 chrX 52355925 52356000 -114294296 + (GA)n Simple_repeat Simple_repeat 1 75 0 3 984 26 50 0 0 chrX 52356265 52356305 -114293991 + AT_rich Low_complexity Low_complexity 1 40 0 3 984 23 33 0 0 chrX 52356323 52356353 -114293943 + AT_rich Low_complexity Low_complexity 1 30 0 3 984 21 36 0 0 chrX 52357268 52357296 -114293000 + AT_rich Low_complexity Low_complexity 1 28 0 3 984 4692 156 33 8 chrX 52357298 52358144 -114292152 - Lx LINE L1 -1 6653 5787 3 984 2550 161 24 0 chrX 52358145 52358637 -114291659 - L1_Mur2 LINE L1 -1127 4750 4247 3 984 3544 196 34 53 chrX 52358640 52360088 -114290208 - L1VL2 LINE L1 -2199 1416 2 3 984 586 283 132 6 chrX 52360094 52360268 -114290028 - L1VL2 LINE L1 -6063 272 77 3 984 580 331 84 19 chrX 52360403 52360665 -114289631 - B4A SINE B4 -3 289 11 3 984 921 241 19 0 chrX 52360905 52361112 -114289184 - B3 SINE B2 -5 211 1 3 984 275 49 0 24 chrX 52361121 52361163 -114289133 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 3 984 395 314 58 0 chrX 52361295 52361416 -114288880 - B1F SINE Alu -1 148 21 3 984 455 287 0 0 chrX 52361474 52361582 -114288714 - B3 SINE B2 -11 205 98 3 984 3645 154 23 25 chrX 52362438 52363129 -114287167 - YREP_Mm Unknown Unknown -35 1777 1088 3 984 578 61 0 0 chrX 52363260 52363342 -114286954 - YREP_Mm Unknown Unknown -745 1067 986 3 984 345 347 154 35 chrX 52363347 52363574 -114286722 - L2 LINE L2 -1119 2300 2047 3 984 438 351 45 0 chrX 52363783 52363917 -114286379 + B4A SINE B4 131 270 -22 3 984 281 312 49 24 chrX 52364410 52364574 -114285722 - L2 LINE L2 -1758 1661 1494 3 984 3558 5 0 0 chrX 52415893 52416283 -114234013 + RLTR4_MM-int LTR ERV1 7212 7601 0 3 984 5501 49 65 0 chrX 52416283 52416980 -114233316 + RLTR4_Mm LTR ERV1 1 742 0 3 984 26108 98 33 39 chrX 52416980 52417416 -114232880 - ETnERV3-int LTR ERVK -1353 4455 4010 3 984 240 35 0 0 chrX 52417416 52417445 -114232851 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 3 984 26108 133 31 37 chrX 52417445 52421890 -114228406 - ETnERV3-int LTR ERVK -1799 4009 188 3 984 307 277 0 0 chrX 52422129 52422230 -114228066 - ETnERV3-int LTR ERVK -6874 379 279 3 984 1077 106 21 32 chrX 52422302 52422488 -114227808 - ETnERV3-int LTR ERVK -5622 186 3 3 984 6642 48 7 0 chrX 52422490 52423306 -114226990 - RLTR13B2 LTR ERVK 0 822 1 3 984 2588 225 25 18 chrX 52423306 52423912 -114226384 + Lx4B LINE L1 6169 6778 -280 3 984 21 57 0 0 chrX 52423912 52423947 -114226349 + AT_rich Low_complexity Low_complexity 1 35 0 3 984 17170 167 14 9 chrX 52424140 52425604 -114224692 + L1_Mus1 LINE L1 2075 3528 -2355 3 984 2474 139 7 19 chrX 52425604 52426014 -114224282 - RLTR9E LTR ERVK -4 405 1 3 984 17170 167 14 9 chrX 52426014 52427842 -114222454 + L1_Mus1 LINE L1 3529 5382 -501 3 984 4005 109 5 17 chrX 52427839 52428437 -114221859 + L1_Mus1 LINE L1 5652 6242 -325 3 984 411 285 40 24 chrX 52428437 52428563 -114221733 - B3 SINE B2 -88 128 1 3 15 313 358 67 0 chrX 52428707 52428827 -114221469 - B1F SINE Alu -1 148 21 3 985 457 287 0 0 chrX 52428882 52428990 -114221306 - B3 SINE B2 -11 205 98 3 985 4051 149 28 24 chrX 52429876 52430664 -114219632 - YREP_Mm Unknown Unknown -36 1776 986 3 985 304 335 172 38 chrX 52430709 52430895 -114219401 - L2 LINE L2 -1162 2257 2047 3 985 475 351 46 7 chrX 52431104 52431256 -114219040 + B4A SINE B4 131 288 -4 3 985 6169 102 0 6 chrX 52431789 52432684 -114217612 - L1Md_F2 LINE L1 -366 5517 4628 3 985 589 129 0 0 chrX 52432672 52432757 -114217539 + L1Md_F2 LINE L1 5502 5586 -297 3 985 7502 58 18 3 chrX 52432757 52433738 -114216558 + L1Md_F2 LINE L1 5587 6582 0 3 985 2610 79 6 3 chrX 52434439 52434783 -114215513 + IAPLTR4 LTR ERVK 1 345 0 3 985 364 277 9 38 chrX 52434797 52434902 -114215394 + IAPLTR3-int LTR ERVK 16 117 -6704 3 985 504 140 9 61 chrX 52434902 52435016 -114215280 + IAPLTR3-int LTR ERVK 834 941 -5880 3 985 353 186 0 92 chrX 52435005 52435135 -114215161 + IAPLTR3-int LTR ERVK 835 952 -6629 3 985 1142 208 88 61 chrX 52435257 52435335 -114214961 + ETnERV3-int LTR ERVK 251 326 -5080 3 985 423 0 0 0 chrX 52435335 52435382 -114214914 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 985 1142 228 87 59 chrX 52435382 52435804 -114214492 + ETnERV3-int LTR ERVK 327 667 -5470 3 985 457 183 92 0 chrX 52435803 52435923 -114214373 + ETnERV3-int LTR ERVK 1719 1849 -5557 3 985 1044 205 130 49 chrX 52435979 52436286 -114214010 - IAPEY3_LTR LTR ERVK 0 332 1 3 985 6605 117 17 9 chrX 52436354 52437504 -114212792 + ETnERV3-int LTR ERVK 2735 3950 -3456 3 985 4987 139 27 73 chrX 52437506 52438531 -114211765 - RLTR13A3 LTR ERVK 0 978 1 3 985 34850 96 15 25 chrX 52438539 52444017 -114206279 - ETnERV3-int LTR ERVK -9 5799 175 3 985 961 170 11 21 chrX 52444284 52444470 -114205826 - ETnERV3-int LTR ERVK -5622 186 3 3 985 4830 149 27 73 chrX 52444472 52445497 -114204799 - RLTR13A3 LTR ERVK 0 978 1 3 985 1057 204 15 0 chrX 52445499 52445700 -114204596 + ETnERV3-int LTR ERVK 4005 4208 -3198 3 985 325 246 17 32 chrX 52445737 52445866 -114204430 + ETnERV3-int LTR ERVK 2357 2459 -2385 3 985 735 102 55 8 chrX 52445873 52446001 -114204295 + MMERVK10C-int LTR ERVK 4528 4661 -2920 3 985 5637 267 48 45 chrX 52446125 52448673 -114201623 + ETnERV3-int LTR ERVK 3468 7329 -351 3 985 2573 93 0 3 chrX 52448673 52449019 -114201277 + IAPLTR4 LTR ERVK 1 345 0 3 985 526 320 28 0 chrX 52449874 52450052 -114200244 - B4A SINE B4 -38 254 72 3 985 310 230 125 36 chrX 52450302 52450422 -114199874 - RMER4B LTR ERVK -214 252 72 3 985 261 0 0 0 chrX 52450422 52450451 -114199845 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 985 310 232 0 12 chrX 52450451 52450490 -114199806 - RMER4B LTR ERVK -514 71 34 3 985 347 333 42 59 chrX 52450679 52450915 -114199381 + RMER15 LTR ERVL 302 533 -42 3 985 515 225 69 42 chrX 52451921 52452065 -114198231 + B1_Mur1 SINE Alu 2 149 0 3 985 21 0 0 0 chrX 52452613 52452634 -114197662 + AT_rich Low_complexity Low_complexity 1 21 0 3 985 2153 199 28 78 chrX 52452725 52453254 -114197042 + RMER15 LTR ERVL 3 505 -70 3 985 667 256 19 38 chrX 52453537 52453695 -114196601 - RSINE1 SINE B4 -1 164 10 3 985 227 73 49 0 chrX 52453889 52453930 -114196366 + (TTTTTG)n Simple_repeat Simple_repeat 2 44 0 3 985 1262 158 24 12 chrX 52454503 52454753 -114195543 - Lx2 LINE L1 -2 6995 6743 3 985 200 86 0 28 chrX 52454891 52454927 -114195369 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 3 985 481 313 28 32 chrX 52455469 52455687 -114194609 + RLTR45 LTR ERVK 266 482 0 3 985 329 404 0 9 chrX 52455960 52456075 -114194221 - PB1 SINE Alu -2 125 12 3 985 655 207 79 0 chrX 52456230 52456370 -114193926 + ORR1C2 LTR MaLR 232 382 -2 3 985 1842 203 22 3 chrX 52456451 52456806 -114193490 - MERVL_2A-int LTR ERVL -3505 2256 1895 3 985 4821 266 53 48 chrX 52456806 52458765 -114191531 + Lx6 LINE L1 5398 7362 -98 3 985 238 136 0 78 chrX 52458825 52458877 -114191419 + GA-rich Low_complexity Low_complexity 3 50 0 3 985 1431 50 0 0 chrX 52458877 52459057 -114191239 + (GA)n Simple_repeat Simple_repeat 1 180 0 3 985 238 136 0 78 chrX 52459057 52459068 -114191228 + polypurine Low_complexity Low_complexity 51 61 0 3 985 24 0 0 0 chrX 52459450 52459474 -114190822 + AT_rich Low_complexity Low_complexity 1 24 0 3 985 261 266 42 11 chrX 52460198 52460293 -114190003 - RMER19B LTR ERVK -2 900 803 3 985 3146 195 61 43 chrX 52460305 52461179 -114189117 + RMER17D LTR ERVK 1 889 0 3 985 2395 149 39 45 chrX 52461273 52461758 -114188538 + L1VL4 LINE L1 462 943 -5359 3 985 2560 138 9 5 chrX 52461745 52462190 -114188106 + MusHAL1 LINE L1 1023 1469 -1243 3 985 4387 216 53 46 chrX 52462212 52462391 -114187905 + MYSERV6-int LTR ERVK 2501 2676 -6283 4 985 8774 14 1 0 chrX 52462391 52463384 -114186912 + L1Md_A LINE L1 5587 6580 -2 4 985 4387 216 53 46 chrX 52463384 52464402 -114185894 + MYSERV6-int LTR ERVK 2677 3706 -5253 4 985 1057 81 29 0 chrX 52464404 52464617 -114185679 + (TCTA)n Simple_repeat Simple_repeat 1 219 0 4 985 2774 207 11 0 chrX 52464617 52465187 -114185109 - L1_Mm LINE L1 -276 5607 5032 4 985 449 217 139 42 chrX 52465356 52465500 -114184796 + RLTR20B1 LTR ERVK 13 170 -393 4 985 621 226 34 11 chrX 52465544 52465723 -114184573 + L1_Mur3 LINE L1 1706 1888 -3992 4 985 3687 234 63 16 chrX 52465733 52466618 -114183678 + Lx5 LINE L1 5828 6754 -296 4 985 23 54 0 0 chrX 52466851 52466888 -114183408 + AT_rich Low_complexity Low_complexity 1 37 0 4 985 456 246 18 0 chrX 52466947 52467057 -114183239 + Lx4A LINE L1 6719 6830 -228 4 985 5731 176 35 19 chrX 52467056 52468385 -114181911 + L1_Mus3 LINE L1 4601 5948 -690 4 985 6319 145 3 5 chrX 52468393 52469502 -114180794 + L1_Mus1 LINE L1 1502 2607 -3276 4 985 979 179 37 78 chrX 52469519 52469761 -114180535 - RLTR46 LTR ERVK -6 314 83 4 985 705 92 37 0 chrX 52469778 52469887 -114180409 - IAPEY3-int LTR ERVK 0 7680 7568 4 985 2530 61 0 3 chrX 52469911 52470224 -114180072 - RLTR10-int LTR ERVK -190 1797 1486 4 985 3017 167 3 84 chrX 52470226 52470867 -114179429 - IAPEY3-int LTR ERVK -147 7434 6846 4 985 4922 221 9 17 chrX 52470880 52472145 -114178151 - IAPEY3-int LTR ERVK -1882 5699 4417 4 985 3182 276 46 20 chrX 52472142 52473133 -114177163 - IAPEY3-int LTR ERVK -6129 1551 535 4 985 24 0 0 0 chrX 52473227 52473251 -114177045 + AT_rich Low_complexity Low_complexity 1 24 0 4 985 1302 176 33 44 chrX 52473351 52473625 -114176671 - RLTR46 LTR ERVK -8 312 42 4 985 14338 156 27 19 chrX 52473638 52474565 -114175731 + L1_Mus1 LINE L1 2615 3532 -2351 4 985 2382 139 7 17 chrX 52474565 52474974 -114175322 - RLTR9E LTR ERVK -4 405 1 4 985 14338 156 27 19 chrX 52474974 52474986 -114175310 + L1_Mus1 LINE L1 3533 3533 -2350 4 985 1889 139 138 28 chrX 52474986 52475414 -114174882 + IAPLTR2_Mm LTR ERVK 1 475 0 4 985 14338 156 27 19 chrX 52475414 52477117 -114173179 + L1_Mus1 LINE L1 3533 5283 -600 4 985 8813 10 0 0 chrX 52477117 52478104 -114172192 + L1Md_A LINE L1 5596 6582 0 4 985 14338 156 27 19 chrX 52478104 52478205 -114172091 + L1_Mus1 LINE L1 5284 5382 -501 4 985 6092 118 8 7 chrX 52478202 52479117 -114171179 + L1_Mus1 LINE L1 5652 6567 0 4 985 462 75 0 0 chrX 52479248 52479315 -114170981 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 985 470 286 70 14 chrX 52479399 52479541 -114170755 + B3 SINE B2 3 152 -64 4 985 236 246 0 90 chrX 52479573 52479640 -114170656 + ID_B1 SINE B4 94 154 -70 4 985 243 374 20 10 chrX 52479630 52479730 -114170566 + B3 SINE B2 107 207 -9 4 985 253 343 39 0 chrX 52480605 52480707 -114169589 - PB1D9 SINE Alu -14 106 1 4 985 343 89 0 0 chrX 52481282 52481327 -114168969 + HAL1-3A_ME LINE L1 1968 2012 -846 4 985 414 174 9 18 chrX 52481328 52481439 -114168857 + (TA)n Simple_repeat Simple_repeat 2 111 0 4 985 186 143 0 0 chrX 52481603 52481638 -114168658 + (T)n Simple_repeat Simple_repeat 1 35 0 4 985 12509 148 8 10 chrX 52482085 52485040 -114165256 - L1_Mus3 LINE L1 -3 6635 3687 4 985 510 263 102 66 chrX 52485075 52485174 -114165122 + B4A SINE B4 115 222 -70 4 985 1016 97 0 52 chrX 52485174 52485327 -114164969 + B1_Mus1 SINE Alu 2 146 -2 4 985 225 0 0 0 chrX 52485327 52485352 -114164944 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 985 294 29 0 0 chrX 52485353 52485388 -114164908 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 985 510 263 102 66 chrX 52485388 52485452 -114164844 + B4A SINE B4 223 286 -6 4 985 820 298 0 0 chrX 52485653 52485834 -114164462 + B3 SINE B2 2 182 -34 4 985 219 294 134 60 chrX 52486757 52486891 -114163405 - B1F SINE Alu -2 147 4 4 985 24 0 0 0 chrX 52486892 52486916 -114163380 + AT_rich Low_complexity Low_complexity 1 24 0 4 985 564 15 0 0 chrX 52487212 52487277 -114163019 + (GA)n Simple_repeat Simple_repeat 1 65 0 4 985 26 50 0 0 chrX 52487542 52487582 -114162714 + AT_rich Low_complexity Low_complexity 1 40 0 4 985 23 33 0 0 chrX 52487600 52487630 -114162666 + AT_rich Low_complexity Low_complexity 1 30 0 4 985 21 36 0 0 chrX 52488545 52488573 -114161723 + AT_rich Low_complexity Low_complexity 1 28 0 4 985 4734 157 32 8 chrX 52488575 52489422 -114160874 - Lx LINE L1 -1 6653 5787 4 985 2550 161 24 0 chrX 52489423 52489915 -114160381 - L1_Mur2 LINE L1 -1127 4750 4247 4 985 3492 195 38 53 chrX 52489918 52491363 -114158933 - L1VL2 LINE L1 -2199 1416 2 4 985 586 283 132 6 chrX 52491369 52491543 -114158753 - L1VL2 LINE L1 -6063 272 77 4 985 569 331 84 19 chrX 52491678 52491940 -114158356 - B4A SINE B4 -3 289 11 4 985 921 241 19 0 chrX 52492181 52492388 -114157908 - B3 SINE B2 -5 211 1 4 985 278 67 0 22 chrX 52492397 52492443 -114157853 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 4 985 395 314 58 0 chrX 52492571 52492692 -114157604 - B1F SINE Alu -1 148 21 4 985 455 287 0 0 chrX 52492750 52492858 -114157438 - B3 SINE B2 -11 205 98 4 985 3645 154 23 25 chrX 52493714 52494405 -114155891 - YREP_Mm Unknown Unknown -35 1777 1088 4 985 578 61 0 0 chrX 52494540 52494622 -114155674 - YREP_Mm Unknown Unknown -745 1067 986 4 985 345 347 154 35 chrX 52494627 52494854 -114155442 - L2 LINE L2 -1119 2300 2047 4 985 438 351 45 0 chrX 52495063 52495197 -114155099 + B4A SINE B4 131 270 -22 4 985 282 305 77 24 chrX 52495687 52495855 -114154441 - L2 LINE L2 -1758 1661 1485 4 985 5659 156 0 13 chrX 52497191 52498159 -114152137 - Lx3B LINE L1 -3 6970 6016 4 985 13119 5 0 0 chrX 52498500 52500000 -114150296 + L1_Mm LINE L1 2207 3706 -2177 4 985 16543 8 0 0 chrX 52500000 52501880 -114148416 + L1Md_A LINE L1 3707 5586 -297 1 985 8822 11 0 0 chrX 52501880 52502873 -114147423 + L1Md_A LINE L1 5587 6579 -3 1 985 241 328 77 36 chrX 52503013 52503260 -114147036 + RMER17C LTR ERVK 87 343 -67 2 985 24 32 0 0 chrX 52503514 52503545 -114146751 + AT_rich Low_complexity Low_complexity 1 31 0 3 985 289 235 29 0 chrX 52503821 52503889 -114146407 - B4A SINE B4 -38 254 185 4 985 363 195 94 27 chrX 52504230 52504389 -114145907 - RMER4B LTR ERVK -344 241 23 5 985 233 330 0 26 chrX 52504557 52504672 -114145624 + RMER15 LTR ERVL 302 413 -162 6 985 219 146 0 0 chrX 52504692 52504733 -114145563 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 7 985 615 198 67 22 chrX 52505814 52505948 -114144348 + B1_Mur1 SINE Alu 2 141 -8 8 985 21 71 0 0 chrX 52506525 52506567 -114143729 + AT_rich Low_complexity Low_complexity 1 42 0 9 985 551 183 9 9 chrX 52506628 52506733 -114143563 + RMER15 LTR ERVL 1 105 -470 1 985 2325 188 8 46 chrX 52506718 52507198 -114143098 + RMER15 LTR ERVL 47 508 -67 1 985 250 342 54 9 chrX 52507279 52507391 -114142905 - RSINE1 SINE B4 -48 117 1 1 985 646 262 19 39 chrX 52507479 52507634 -114142662 - RSINE1 SINE B4 -2 163 12 1 985 9115 61 3 1 chrX 52508043 52509499 -114140797 - L1Md_F3 LINE L1 -431 6153 4695 1 985 5419 66 16 0 chrX 52509497 52510239 -114140057 + L1_Mm LINE L1 3734 4487 -1396 1 985 2454 173 8 10 chrX 52510235 52510732 -114139564 - L1_Mm LINE L1 -3583 2300 1805 1 985 3764 163 16 21 chrX 52510733 52511347 -114138949 - ETnERV2-int LTR ERVK -302 7104 6494 1 985 1159 327 25 21 chrX 52511399 52511956 -114138340 - RNERVK23-int LTR ERVK -413 7804 7246 1 985 311 277 0 0 chrX 52512804 52512887 -114137409 - RLTR6-int LTR ERV1 -1543 6235 6153 1 985 425 265 15 36 chrX 52512813 52512950 -114137346 - RNERVK23-int LTR ERVK -1889 6328 6195 1 985 1233 304 48 41 chrX 52513326 52514114 -114136182 - RNERVK23-int LTR ERVK -2513 5704 4586 1 985 283 222 154 31 chrX 52514109 52514239 -114136057 - RNERVK23-int LTR ERVK -3779 4438 4293 1 985 2167 299 52 42 chrX 52514508 52515803 -114134493 - RNERVK23-int LTR ERVK -3042 4364 2696 1 985 283 306 31 37 chrX 52517942 52518105 -114132191 - RLTR45-int LTR ERVK -6914 330 169 1 985 3427 133 7 1 chrX 52518779 52519422 -114130874 - L1VL1 LINE L1 -2104 1594 947 2 985 1205 116 17 0 chrX 52519432 52519613 -114130683 - MTB LTR MaLR 0 400 217 2 985 4556 154 2 14 chrX 52519614 52520416 -114129880 - L1_Mm LINE L1 -541 5342 4550 2 985 334 129 0 16 chrX 52520424 52520487 -114129809 + L1Md_F LINE L1 1172 1233 -5383 2 985 212 167 0 0 chrX 52520487 52520529 -114129767 + A-rich Low_complexity Low_complexity 1 42 0 2 985 13467 152 2 15 chrX 52520538 52523008 -114127288 + L1Md_F LINE L1 1220 3659 -2224 2 985 2170 196 28 21 chrX 52523005 52523438 -114126858 + L1Md_F LINE L1 5432 5867 -16 2 985 12099 140 11 17 chrX 52523443 52525496 -114124800 + RMER16-int LTR ERVK 2413 4453 -953 2 985 2735 56 9 3 chrX 52525496 52525839 -114124457 + IAPLTR4 LTR ERVK 1 345 0 2 985 1957 292 55 67 chrX 52525839 52526805 -114123491 + IAPLTR3-int LTR ERVK 1 954 -5867 2 985 23 68 0 0 chrX 52526814 52526858 -114123438 + AT_rich Low_complexity Low_complexity 1 44 0 2 985 1208 229 105 34 chrX 52527031 52527525 -114122771 + RMER16-int LTR ERVK 254 685 -5452 2 985 436 239 88 0 chrX 52527517 52527630 -114122666 + RMER16-int LTR ERVK 938 1060 -5077 2 985 342 256 0 55 chrX 52527643 52527734 -114122562 + ETnERV3-int LTR ERVK 2454 2539 -4867 2 985 6564 114 19 12 chrX 52527746 52528903 -114121393 + ETnERV3-int LTR ERVK 2735 3952 -3454 2 985 4829 151 27 72 chrX 52528903 52529927 -114120369 - RLTR13A3 LTR ERVK 0 978 1 3 985 34115 97 23 25 chrX 52529935 52531721 -114118575 - ETnERV3-int LTR ERVK -9 5799 4011 3 985 234 0 0 0 chrX 52531721 52531747 -114118549 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 3 985 34115 106 22 25 chrX 52531747 52535495 -114114801 - ETnERV3-int LTR ERVK -1798 4010 186 3 985 1012 154 11 21 chrX 52535659 52535845 -114114451 - ETnERV3-int LTR ERVK -5622 186 3 3 985 4776 153 27 72 chrX 52535847 52536871 -114113425 - RLTR13A3 LTR ERVK 0 978 1 3 985 1038 209 15 0 chrX 52536873 52537074 -114113222 + IAPLTR3-int LTR ERVK 4005 4208 -3198 3 985 386 238 11 35 chrX 52537111 52537241 -114113055 + IAPLTR3-int LTR ERVK 2357 2464 -2380 3 985 784 102 47 8 chrX 52537248 52537377 -114112919 + MMERVK10C-int LTR ERVK 4528 4661 -2920 3 985 5813 270 47 44 chrX 52537501 52540051 -114110245 + IAPLTR3-int LTR ERVK 3468 7324 -356 3 985 2461 89 27 3 chrX 52540051 52540388 -114109908 + IAPLTR4 LTR ERVK 1 345 0 3 985 553 309 28 0 chrX 52541245 52541423 -114108873 - B4A SINE B4 -38 254 72 3 985 515 225 69 42 chrX 52542387 52542531 -114107765 + B1_Mur1 SINE Alu 2 149 0 3 985 21 0 0 0 chrX 52542977 52542998 -114107298 + AT_rich Low_complexity Low_complexity 1 21 0 3 985 2214 193 28 78 chrX 52543089 52543618 -114106678 + RMER15 LTR ERVL 3 505 -70 3 985 624 270 19 38 chrX 52543901 52544059 -114106237 - RSINE1 SINE B4 -1 164 10 3 985 222 116 0 0 chrX 52544252 52544295 -114106001 + (T)n Simple_repeat Simple_repeat 1 43 0 3 985 1312 153 28 8 chrX 52544868 52545118 -114105178 - Lx2 LINE L1 0 6997 6743 4 985 21 0 0 0 chrX 52545445 52545466 -114104830 + AT_rich Low_complexity Low_complexity 1 21 0 4 985 1169 216 63 17 chrX 52545913 52546215 -114104081 + RMER17D LTR ERVK 574 889 0 4 985 2339 153 39 45 chrX 52546309 52546794 -114103502 + L1VL4 LINE L1 462 943 -5359 4 985 2568 135 9 7 chrX 52546781 52547227 -114103069 + MusHAL1 LINE L1 1023 1469 -1243 4 985 4422 216 54 36 chrX 52547249 52548434 -114101862 + MYSERV6-int LTR ERVK 2501 3706 -5253 4 985 963 79 36 0 chrX 52548436 52548601 -114101695 + (TCTA)n Simple_repeat Simple_repeat 4 174 0 4 985 2878 203 0 2 chrX 52548601 52549178 -114101118 - L1_Mm LINE L1 -276 5607 5032 4 985 449 217 139 42 chrX 52549347 52549491 -114100805 + RLTR20B1 LTR ERVK 13 170 -393 4 985 659 215 34 11 chrX 52549534 52549713 -114100583 + L1_Mur3 LINE L1 1706 1888 -3992 4 985 3791 230 63 16 chrX 52549723 52550608 -114099688 + Lx5 LINE L1 5828 6754 -296 5 985 21 57 0 0 chrX 52550840 52550875 -114099421 + AT_rich Low_complexity Low_complexity 1 35 0 5 985 450 252 17 9 chrX 52550928 52551044 -114099252 + Lx4A LINE L1 6714 6830 -228 5 985 1705 217 0 60 chrX 52551043 52551480 -114098816 + L1_Mus3 LINE L1 4601 5011 -872 5 985 747 179 220 33 chrX 52551481 52551695 -114098601 - RMER10A LTR ERVL -112 330 77 5 985 2356 142 24 7 chrX 52551697 52552192 -114098104 + L1_Mus3 LINE L1 5446 5948 -690 5 985 6389 141 3 13 chrX 52552190 52553318 -114096978 + L1_Mus1 LINE L1 1492 2607 -3276 5 985 1005 197 34 51 chrX 52553335 52553570 -114096726 - RLTR46 LTR ERVK -6 314 84 5 985 720 111 0 0 chrX 52553594 52553702 -114096594 - IAPEY3-int LTR ERVK 0 7581 7474 5 985 2522 64 0 3 chrX 52553727 52554040 -114096256 - RLTR10-int LTR ERVK -190 1797 1486 5 985 3065 160 3 84 chrX 52554042 52554683 -114095613 - IAPEY3-int LTR ERVK -147 7434 6846 5 985 4892 223 10 15 chrX 52554696 52555958 -114094338 - IAPEY3-int LTR ERVK -1882 5699 4417 5 985 3207 277 46 20 chrX 52555955 52556946 -114093350 - IAPEY3-int LTR ERVK -6129 1551 535 5 985 1253 176 36 47 chrX 52557177 52557451 -114092845 - RLTR46 LTR ERVK -8 312 42 5 985 14667 164 8 12 chrX 52557464 52558391 -114091905 + L1_Mus1 LINE L1 2615 3532 -2351 5 985 2338 144 7 17 chrX 52558391 52558800 -114091496 - RLTR9E LTR ERVK -4 405 1 6 985 14667 164 8 12 chrX 52558800 52558812 -114091484 + L1_Mus1 LINE L1 3533 3533 -2350 5 985 1887 161 122 12 chrX 52558812 52559240 -114091056 + IAPLTR2_Mm LTR ERVK 1 475 0 6 123 14667 164 8 12 chrX 52559240 52561078 -114089218 + L1_Mus1 LINE L1 3533 5382 -501 5 986 5892 129 9 8 chrX 52561075 52561990 -114088306 + L1_Mus1 LINE L1 5652 6567 0 5 986 438 53 0 0 chrX 52562129 52562186 -114088110 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 986 470 286 70 14 chrX 52562270 52562412 -114087884 + B3 SINE B2 3 152 -64 6 986 236 246 0 90 chrX 52562444 52562511 -114087785 + ID_B1 SINE B4 94 154 -70 6 986 243 374 20 10 chrX 52562501 52562601 -114087695 + B3 SINE B2 107 207 -9 6 986 277 341 37 0 chrX 52563497 52563579 -114086717 - B1_Mur3 SINE Alu -64 85 1 6 986 810 124 7 13 chrX 52564176 52564331 -114085965 + (TA)n Simple_repeat Simple_repeat 2 155 0 6 986 208 147 0 0 chrX 52564495 52564529 -114085767 + (T)n Simple_repeat Simple_repeat 1 34 0 6 986 12048 140 12 8 chrX 52564977 52566349 -114083947 - L1_Mus3 LINE L1 -4 6634 5235 6 986 189 0 0 0 chrX 52566349 52566370 -114083926 + (TA)n Simple_repeat Simple_repeat 1 21 0 7 986 12048 157 11 28 chrX 52566370 52567973 -114082323 - L1_Mus3 LINE L1 -649 5234 3688 6 986 556 250 102 66 chrX 52568008 52568107 -114082189 + B4A SINE B4 115 222 -70 7 986 1070 109 0 0 chrX 52568107 52568254 -114082042 + B1_Mus1 SINE Alu 2 148 0 7 986 270 0 0 0 chrX 52568255 52568285 -114082011 + (TA)n Simple_repeat Simple_repeat 2 31 0 7 986 438 20 0 0 chrX 52568285 52568335 -114081961 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 986 556 250 102 66 chrX 52568335 52568399 -114081897 + B4A SINE B4 223 286 -6 7 986 770 315 0 0 chrX 52568601 52568782 -114081514 + B3 SINE B2 2 182 -34 7 986 23 0 0 0 chrX 52569841 52569864 -114080432 + AT_rich Low_complexity Low_complexity 1 23 0 7 986 306 0 0 0 chrX 52570145 52570179 -114080117 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 986 387 0 0 0 chrX 52570179 52570221 -114080075 + (GA)n Simple_repeat Simple_repeat 1 43 0 7 986 26 50 0 0 chrX 52570482 52570522 -114079774 + AT_rich Low_complexity Low_complexity 1 40 0 7 986 23 33 0 0 chrX 52570540 52570570 -114079726 + AT_rich Low_complexity Low_complexity 1 30 0 8 986 21 36 0 0 chrX 52571484 52571512 -114078784 + AT_rich Low_complexity Low_complexity 1 28 0 8 986 4833 150 32 9 chrX 52571514 52572362 -114077934 - Lx LINE L1 -1 6653 5787 8 986 2481 166 22 14 chrX 52572363 52572863 -114077433 - L1_Mur2 LINE L1 -1127 4750 4247 8 986 3510 197 42 50 chrX 52572866 52574300 -114075996 - L1VL2 LINE L1 -2199 1416 2 8 986 569 264 137 6 chrX 52574306 52574474 -114075822 - L1VL2 LINE L1 -6063 272 83 8 986 652 315 84 19 chrX 52574615 52574877 -114075419 - B4A SINE B4 -3 289 11 8 986 941 237 19 0 chrX 52575116 52575323 -114074973 - B3 SINE B2 -5 211 1 8 986 262 24 0 67 chrX 52575331 52575376 -114074920 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 8 986 419 306 58 0 chrX 52575507 52575628 -114074668 - B1F SINE Alu -1 148 21 8 986 510 315 61 12 chrX 52575686 52575850 -114074446 - B3 SINE B2 -11 205 34 9 986 3645 154 23 25 chrX 52576649 52577340 -114072956 - YREP_Mm Unknown Unknown -35 1777 1088 9 986 578 61 0 0 chrX 52577474 52577556 -114072740 - YREP_Mm Unknown Unknown -745 1067 986 9 986 345 347 154 35 chrX 52577561 52577788 -114072508 - L2 LINE L2 -1119 2300 2047 9 986 438 351 45 0 chrX 52577997 52578131 -114072165 + B4A SINE B4 131 270 -22 9 986 292 299 77 24 chrX 52578621 52578789 -114071507 - L2 LINE L2 -1758 1661 1485 9 986 5659 156 0 13 chrX 52580125 52581093 -114069203 - Lx3B LINE L1 -3 6970 6016 9 986 279 246 29 0 chrX 52582354 52582423 -114067873 - B4A SINE B4 -38 254 184 9 986 361 181 100 40 chrX 52582764 52582922 -114067374 - RMER4B LTR ERVK -344 241 26 9 986 258 353 61 48 chrX 52583094 52583242 -114067054 + RMER15 LTR ERVL 302 451 -124 9 986 234 0 0 0 chrX 52583242 52583268 -114067028 + (CAA)n Simple_repeat Simple_repeat 2 27 0 9 986 258 353 61 48 chrX 52583268 52583348 -114066948 + RMER15 LTR ERVL 452 533 -42 9 986 627 198 67 22 chrX 52584351 52584485 -114065811 + B1_Mur1 SINE Alu 2 141 -8 9 986 539 192 9 9 chrX 52585152 52585257 -114065039 + RMER15 LTR ERVL 1 105 -470 1 986 2328 171 15 50 chrX 52585242 52585721 -114064575 + RMER15 LTR ERVL 47 508 -67 1 986 218 375 45 0 chrX 52585801 52585913 -114064383 - RSINE1 SINE B4 -48 117 1 1 986 608 241 46 40 chrX 52586001 52586152 -114064144 - RSINE1 SINE B4 -2 163 12 1 986 1090 216 25 0 chrX 52586938 52587179 -114063117 - Lx2 LINE L1 -7 6990 6744 1 986 186 43 0 0 chrX 52587276 52587299 -114062997 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 1 986 21 57 0 0 chrX 52587690 52587725 -114062571 + AT_rich Low_complexity Low_complexity 1 35 0 1 986 8973 63 1 2 chrX 52587764 52589398 -114060898 - L1Md_F3 LINE L1 -257 6327 4695 1 986 5371 69 16 0 chrX 52589396 52590138 -114060158 + L1_Mm LINE L1 3734 4487 -1396 1 986 2443 175 8 10 chrX 52590134 52590631 -114059665 - L1_Mm LINE L1 -3583 2300 1805 1 986 3738 166 16 21 chrX 52590632 52591246 -114059050 - ETnERV2-int LTR ERVK -302 7104 6494 1 986 1099 323 30 27 chrX 52591298 52591855 -114058441 - RNERVK23-int LTR ERVK -413 7804 7246 1 986 440 248 22 43 chrX 52592715 52592854 -114057442 - RNERVK23-int LTR ERVK -1889 6328 6193 1 986 1241 305 52 38 chrX 52593228 52594018 -114056278 - RNERVK23-int LTR ERVK -2531 5686 4586 1 986 2148 302 63 66 chrX 52594013 52595723 -114054573 - RNERVK23-int LTR ERVK -2512 4309 2696 1 986 262 325 50 99 chrX 52596368 52596730 -114053566 - RNERVK23-int LTR ERVK -4524 1643 1300 1 986 261 340 18 55 chrX 52597753 52598027 -114052269 - RNERVK23-int LTR ERVK -6812 432 169 1 986 606 229 42 0 chrX 52598580 52598698 -114051598 - ETnERV2-int LTR ERVK -214 7192 7070 1 986 3415 138 9 2 chrX 52598701 52599350 -114050946 - L1VL1 LINE L1 -2104 1594 941 1 986 1160 133 17 0 chrX 52599356 52599537 -114050759 - MTB LTR MaLR 0 400 217 1 986 4488 157 2 15 chrX 52599538 52600341 -114049955 - L1_Mm LINE L1 -541 5342 4550 1 986 394 117 7 14 chrX 52600349 52600440 -114049856 + L1Md_F LINE L1 1172 1264 -2651 1 986 183 217 0 0 chrX 52600440 52600500 -114049796 + A-rich Low_complexity Low_complexity 1 60 0 1 986 13479 148 2 17 chrX 52600500 52602945 -114047351 + L1Md_F LINE L1 1252 3659 -2224 1 986 2301 193 2 20 chrX 52602942 52603386 -114046910 + L1Md_F LINE L1 5432 5867 -16 1 986 12112 140 12 7 chrX 52603390 52605423 -114044873 + RMER16-int LTR ERVK 2413 4456 -950 1 986 2640 73 6 3 chrX 52605423 52605767 -114044529 + IAPLTR4 LTR ERVK 1 345 0 1 986 862 226 5 30 chrX 52605767 52605968 -114044328 + IAPLTR3-int LTR ERVK 1 196 -6625 1 986 1553 284 26 36 chrX 52605945 52606513 -114043783 + IAPLTR3-int LTR ERVK 138 954 -5867 1 986 1232 220 106 35 chrX 52606728 52607222 -114043074 + ETnERV2-int LTR ERVK 254 685 -5452 1 986 481 221 88 0 chrX 52607214 52607327 -114042969 + ETnERV2-int LTR ERVK 938 1060 -5077 1 986 322 267 0 55 chrX 52607340 52607431 -114042865 + ETnERV3-int LTR ERVK 2454 2539 -4867 1 986 6201 130 45 7 chrX 52607443 52608817 -114041479 + ETnERV3-int LTR ERVK 2735 4271 -3135 1 986 544 187 12 0 chrX 52608819 52608938 -114041358 + ETnERV3-int LTR ERVK 2357 2464 -2380 1 986 785 59 0 0 chrX 52608955 52609056 -114041240 + MMERVK10C-int LTR ERVK 4530 4630 -2951 1 986 5598 251 42 52 chrX 52609206 52611765 -114038531 + ETnERV3-int LTR ERVK 3468 7329 -351 1 986 2601 84 0 3 chrX 52611765 52612111 -114038185 + IAPLTR4 LTR ERVK 1 345 0 1 986 1686 101 0 8 chrX 52612111 52612351 -114037945 + RMER16-int LTR ERVK 4451 4688 -718 1 986 3302 209 60 73 chrX 52612391 52614782 -114035514 + ETnERV2-int LTR ERVK 1014 4088 -3318 1 986 10837 94 6 2 chrX 52614793 52616989 -114033307 - L1Md_F2 LINE L1 -12 6570 4368 1 986 6116 117 5 1 chrX 52616989 52617945 -114032351 + L1Md_F2 LINE L1 3361 4320 -1563 1 986 429 222 23 38 chrX 52617946 52618077 -114032219 + ETnERV2-int LTR ERVK 4612 4740 -2504 1 986 1025 111 13 0 chrX 52618074 52618227 -114032069 + ETnERV2-int LTR ERVK 5249 5403 -3 1 986 2832 142 18 4 chrX 52618228 52618709 -114031587 + RMER16 LTR ERVK 1 532 -1 1 986 250 208 0 0 chrX 52618710 52618763 -114031533 + L1M LINE L1 5366 5418 -879 1 986 2351 101 151 98 chrX 52618967 52619418 -114030878 + MT2C_Mm LTR ERVL 1 475 0 1 986 3453 119 14 0 chrX 52619418 52619929 -114030367 + MERVL-int LTR ERVL 1 518 -4967 1 986 334 103 17 0 chrX 52619932 52619990 -114030306 + L1_Mus2 LINE L1 6508 6566 0 1 986 4531 12 0 0 chrX 52620336 52620883 -114029413 - L1Md_T LINE L1 0 6582 6075 1 986 6672 43 0 0 chrX 52620895 52621735 -114028561 + L1_Mm LINE L1 2510 3349 -2534 1 986 1809 222 25 29 chrX 52622652 52623250 -114027046 + L1_Mur2 LINE L1 907 1501 -4376 1 986 929 114 7 7 chrX 52623250 52623391 -114026905 + B1_Mus1 SINE Alu 2 142 -6 1 986 1809 231 36 97 chrX 52623391 52623806 -114026490 + L1_Mur2 LINE L1 1502 1883 -3994 1 986 1161 208 42 2 chrX 52623820 52624081 -114026215 + Lx5 LINE L1 5826 6098 -1598 1 986 1938 32 20 0 chrX 52624111 52624360 -114025936 - RLTR13B2 LTR ERVK 0 822 569 1 986 18120 104 28 26 chrX 52624372 52626257 -114024039 - ETnERV3-int LTR ERVK -2726 3082 1211 1 986 195 42 0 0 chrX 52626257 52626281 -114024015 + (TTTCC)n Simple_repeat Simple_repeat 5 28 0 1 986 18120 199 23 23 chrX 52626281 52627898 -114022398 - ETnERV3-int LTR ERVK -5568 1685 188 1 986 284 287 0 0 chrX 52628130 52628231 -114022065 - ETnERV3-int LTR ERVK -6874 379 279 1 986 995 128 17 28 chrX 52628312 52628489 -114021807 - ETnERV3-int LTR ERVK -5631 177 3 1 986 6894 38 5 0 chrX 52628491 52629309 -114020987 - RLTR13B2 LTR ERVK 0 822 1 1 986 2577 222 26 18 chrX 52629309 52629914 -114020382 + Lx4B LINE L1 6169 6778 -280 1 986 21 57 0 0 chrX 52629914 52629949 -114020347 + AT_rich Low_complexity Low_complexity 1 35 0 1 986 17302 163 14 8 chrX 52630169 52631596 -114018700 + L1_Mus1 LINE L1 2104 3528 -2355 1 986 2364 150 10 17 chrX 52631596 52632004 -114018292 - RLTR9E LTR ERVK -4 405 1 1 986 17302 163 14 8 chrX 52632004 52633829 -114016467 + L1_Mus1 LINE L1 3529 5377 -506 1 986 3978 114 5 16 chrX 52633830 52634435 -114015861 + L1_Mus1 LINE L1 5652 6249 -318 1 986 405 267 42 25 chrX 52634435 52634554 -114015742 - B3 SINE B2 -95 121 1 1 986 267 362 57 0 chrX 52634699 52634804 -114015492 - B1F SINE Alu -1 148 38 1 986 419 306 0 0 chrX 52634874 52634982 -114015314 - B3 SINE B2 -11 205 98 1 986 4127 152 25 22 chrX 52635869 52636657 -114013639 - YREP_Mm Unknown Unknown -36 1776 986 1 986 315 331 176 39 chrX 52636702 52636884 -114013412 - L2 LINE L2 -1162 2257 2051 1 986 422 333 52 7 chrX 52637097 52637233 -114013063 + B4A SINE B4 131 272 -20 1 986 192 306 88 32 chrX 52637343 52637468 -114012828 - L2 LINE L2 -1547 1872 1741 1 986 6032 108 0 5 chrX 52637791 52638684 -114011612 - L1Md_F2 LINE L1 -367 5516 4628 1 986 4280 65 7 0 chrX 52638672 52639304 -114010992 + L1Md_F2 LINE L1 5502 6137 -445 1 986 924 201 168 5 chrX 52639304 52639524 -114010772 - IAPEY3_LTR LTR ERVK -76 256 1 1 986 6568 120 38 4 chrX 52639592 52640740 -114009556 + ETnERV3-int LTR ERVK 2735 3950 -3456 1 986 5012 143 26 72 chrX 52640742 52641767 -114008529 - RLTR13A3 LTR ERVK 0 978 1 1 986 34048 102 18 27 chrX 52641775 52643561 -114006735 - ETnERV3-int LTR ERVK -9 5799 4011 1 986 306 0 0 0 chrX 52643561 52643595 -114006701 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 1 986 34048 109 17 27 chrX 52643595 52647377 -114002919 - ETnERV3-int LTR ERVK -1798 4010 186 1 986 1114 126 11 21 chrX 52647542 52647728 -114002568 - ETnERV3-int LTR ERVK -5622 186 3 1 986 4709 157 26 72 chrX 52647730 52648755 -114001541 - RLTR13A3 LTR ERVK 0 978 1 1 986 1012 219 15 0 chrX 52648757 52648958 -114001338 + ETnERV2-int LTR ERVK 4005 4208 -3198 1 986 379 234 9 36 chrX 52648997 52649108 -114001188 + MMETn-int LTR ERVK 2357 2464 -2380 1 986 793 94 47 8 chrX 52649133 52649261 -114001035 + ETnERV2-int LTR ERVK 4529 4661 -2920 1 986 5683 273 47 42 chrX 52649385 52651931 -113998365 + IAPLTR3-int LTR ERVK 3468 7329 -351 1 986 2535 93 0 3 chrX 52651931 52652277 -113998019 + IAPLTR4 LTR ERVK 1 345 0 1 986 526 316 34 0 chrX 52653131 52653308 -113996988 - B4A SINE B4 -38 254 72 1 986 312 239 95 31 chrX 52653547 52653678 -113996618 - RMER4A LTR ERVK -202 264 72 1 986 252 0 0 0 chrX 52653678 52653706 -113996590 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1 986 297 216 11 33 chrX 52653706 52653746 -113996550 - RMER4A LTR ERVK -514 71 34 1 986 412 320 73 66 chrX 52653894 52654182 -113996114 + RMER15 LTR ERVL 244 533 -42 1 986 453 246 69 42 chrX 52655186 52655330 -113994966 + B1_Mur1 SINE Alu 2 149 0 1 986 21 0 0 0 chrX 52655878 52655899 -113994397 + AT_rich Low_complexity Low_complexity 1 21 0 1 986 2153 197 30 79 chrX 52655990 52656519 -113993777 + RMER15 LTR ERVL 3 505 -70 1 986 240 345 63 9 chrX 52656603 52656714 -113993582 - RSINE1 SINE B4 -48 117 1 1 986 650 270 19 38 chrX 52656801 52656959 -113993337 - RSINE1 SINE B4 -1 164 10 1 986 192 97 0 0 chrX 52657153 52657184 -113993112 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 1 986 1205 166 24 24 chrX 52657758 52658011 -113992285 - Lx2 LINE L1 -2 6995 6743 1 986 185 86 0 54 chrX 52658148 52658185 -113992111 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 1 986 455 322 28 32 chrX 52658728 52658946 -113991350 + RLTR45 LTR ERVK 266 482 0 1 986 335 395 0 9 chrX 52659207 52659322 -113990974 - PB1 SINE Alu -2 125 12 1 986 656 194 86 0 chrX 52659477 52659616 -113990680 + ORR1C2 LTR MaLR 232 382 -2 1 986 1863 203 22 3 chrX 52659697 52660052 -113990244 - MERVL_2A-int LTR ERVL -3505 2256 1895 1 986 4773 262 56 51 chrX 52660052 52662013 -113988283 + Lx6 LINE L1 5398 7361 -99 1 986 699 144 0 0 chrX 52662074 52662199 -113988097 + (GA)n Simple_repeat Simple_repeat 1 125 0 1 986 24 0 0 0 chrX 52662577 52662601 -113987695 + AT_rich Low_complexity Low_complexity 1 24 0 1 986 286 281 21 0 chrX 52663325 52663421 -113986875 - RMER19B LTR ERVK -2 900 803 1 986 3223 199 57 40 chrX 52663433 52664307 -113985989 + RMER17D LTR ERVK 1 889 0 1 986 2323 156 39 45 chrX 52664401 52664886 -113985410 + L1VL4 LINE L1 462 943 -5359 1 986 2582 135 9 9 chrX 52664873 52665320 -113984976 + MusHAL1 LINE L1 1023 1469 -1243 1 986 4348 214 57 39 chrX 52665342 52666527 -113983769 + MYSERV6-int LTR ERVK 2501 3706 -5253 1 986 1152 52 23 11 chrX 52666529 52666705 -113983591 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 1 986 2915 201 0 0 chrX 52666728 52667304 -113982992 - L1_Mm LINE L1 -276 5607 5032 1 986 254 195 117 58 chrX 52667328 52667448 -113982848 + RMER6-int LTR ERVK 2703 2829 -348 1 986 452 225 139 42 chrX 52667473 52667617 -113982679 + RLTR20B1 LTR ERVK 13 170 -393 1 986 659 215 34 11 chrX 52667662 52667841 -113982455 + L1_Mur3 LINE L1 1706 1888 -3992 1 986 3771 231 62 15 chrX 52667851 52668736 -113981560 + Lx5 LINE L1 5828 6754 -296 1 986 23 54 0 0 chrX 52668969 52669006 -113981290 + AT_rich Low_complexity Low_complexity 1 37 0 1 986 438 239 28 0 chrX 52669065 52669174 -113981122 + Lx4A LINE L1 6719 6830 -228 1 986 5583 178 41 18 chrX 52669173 52670490 -113979806 + L1_Mus3 LINE L1 4601 5948 -690 1 986 6256 143 3 19 chrX 52670488 52671621 -113978675 + L1_Mus1 LINE L1 1492 2607 -3276 1 986 924 209 29 70 chrX 52671638 52671880 -113978416 - RLTR46 LTR ERVK -6 314 83 1 986 748 73 37 0 chrX 52671897 52672006 -113978290 - IAPEY3-int LTR ERVK 0 7680 7568 1 986 2571 55 3 0 chrX 52672030 52672341 -113977955 - RLTR10-int LTR ERVK -190 1797 1486 1 986 3050 162 3 84 chrX 52672343 52672984 -113977312 - IAPEY3-int LTR ERVK -147 7434 6846 1 986 4898 211 11 21 chrX 52672997 52674266 -113976030 - IAPEY3-int LTR ERVK -1882 5699 4417 1 986 3126 279 46 22 chrX 52674263 52675256 -113975040 - IAPEY3-int LTR ERVK -6129 1551 535 1 986 23 0 0 0 chrX 52675350 52675373 -113974923 + AT_rich Low_complexity Low_complexity 1 23 0 1 986 1313 174 32 43 chrX 52675473 52675750 -113974546 - RLTR46 LTR ERVK -5 315 42 1 986 14676 157 9 19 chrX 52675763 52676693 -113973603 + L1_Mus1 LINE L1 2615 3532 -2351 1 986 2318 147 7 17 chrX 52676693 52677102 -113973194 - RLTR9E LTR ERVK -4 405 1 1 986 14676 157 9 19 chrX 52677102 52677114 -113973182 + L1_Mus1 LINE L1 3533 3538 -2345 1 986 1886 156 122 12 chrX 52677114 52677542 -113972754 + IAPLTR2_Mm LTR ERVK 1 475 0 1 986 14676 157 9 19 chrX 52677542 52679394 -113970902 + L1_Mus1 LINE L1 3539 5382 -501 1 986 5921 128 8 7 chrX 52679391 52680306 -113969990 + L1_Mus1 LINE L1 5652 6567 0 1 986 390 21 0 0 chrX 52680438 52680485 -113969811 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 986 363 280 74 33 chrX 52680569 52680691 -113969605 + B3 SINE B2 3 129 -87 1 986 9813 22 0 0 chrX 52680691 52681834 -113968462 + L1Md_T LINE L1 4444 5586 -297 1 986 8606 12 17 0 chrX 52681834 52682813 -113967483 + L1Md_T LINE L1 5587 6582 0 1 986 236 246 0 90 chrX 52682892 52682959 -113967337 + ID_B1 SINE B4 94 154 -70 1 986 246 340 40 30 chrX 52682949 52683049 -113967247 + B3 SINE B2 107 207 -9 1 986 259 341 37 0 chrX 52683927 52684009 -113966287 - B1_Mur3 SINE Alu -64 85 1 1 986 264 329 0 0 chrX 52683943 52684013 -113966283 - B4A SINE B4 -141 151 82 1 986 200 40 0 0 chrX 52684587 52684612 -113965684 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 986 765 134 7 13 chrX 52684612 52684763 -113965533 + (TA)n Simple_repeat Simple_repeat 2 151 0 2 986 208 147 0 0 chrX 52684928 52684962 -113965334 + (T)n Simple_repeat Simple_repeat 1 34 0 2 986 12439 142 13 2 chrX 52685409 52686780 -113963516 - L1_Mus3 LINE L1 -4 6634 5235 2 986 369 0 0 0 chrX 52686780 52686821 -113963475 + (TA)n Simple_repeat Simple_repeat 1 41 0 2 986 12439 156 12 2 chrX 52686821 52688363 -113961933 - L1_Mus3 LINE L1 -649 5234 3688 2 986 362 213 27 0 chrX 52688422 52688497 -113961799 + B4A SINE B4 153 229 -63 2 986 1057 116 0 0 chrX 52688497 52688644 -113961652 + B1_Mus1 SINE Alu 2 148 0 2 986 342 0 0 0 chrX 52688654 52688692 -113961604 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 986 351 0 0 0 chrX 52688692 52688730 -113961566 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 986 809 298 0 0 chrX 52688996 52689177 -113961119 + B3 SINE B2 2 182 -34 2 986 22 0 0 0 chrX 52690236 52690258 -113960038 + AT_rich Low_complexity Low_complexity 1 22 0 2 986 564 15 0 0 chrX 52690554 52690619 -113959677 + (GA)n Simple_repeat Simple_repeat 1 65 0 2 986 26 50 0 0 chrX 52690886 52690926 -113959370 + AT_rich Low_complexity Low_complexity 1 40 0 2 987 23 33 0 0 chrX 52690944 52690974 -113959322 + AT_rich Low_complexity Low_complexity 1 30 0 2 987 4732 158 32 7 chrX 52691918 52692764 -113957532 - Lx LINE L1 -1 6653 5787 2 987 2529 160 22 14 chrX 52692765 52693265 -113957031 - L1_Mur2 LINE L1 -1127 4750 4247 2 987 3594 203 32 48 chrX 52693268 52694714 -113955582 - L1VL2 LINE L1 -2199 1416 2 2 987 628 260 132 6 chrX 52694720 52694894 -113955402 - L1VL2 LINE L1 -6063 272 77 2 987 21 57 0 0 chrX 52694977 52695012 -113955284 + AT_rich Low_complexity Low_complexity 1 35 0 2 987 657 319 84 19 chrX 52695029 52695291 -113955005 - B4A SINE B4 -3 289 11 2 987 968 231 19 0 chrX 52695529 52695741 -113954555 - B3 SINE B2 0 216 1 2 987 396 314 58 0 chrX 52695902 52696023 -113954273 - B1F SINE Alu -1 148 21 2 987 468 287 0 0 chrX 52696081 52696189 -113954107 - B3 SINE B2 -11 205 98 2 987 4288 146 21 21 chrX 52697046 52697838 -113952458 - YREP_Mm Unknown Unknown -35 1777 986 2 987 313 339 157 52 chrX 52697843 52698073 -113952223 - L2 LINE L2 -1119 2300 2047 2 987 404 351 45 0 chrX 52698283 52698417 -113951879 + B4A SINE B4 131 270 -22 2 987 273 308 55 30 chrX 52698898 52699062 -113951234 - L2 LINE L2 -1758 1661 1494 2 987 5598 158 3 8 chrX 52700404 52701368 -113948928 - Lx3A LINE L1 -7 6974 6016 2 987 239 328 77 36 chrX 52701822 52702069 -113948227 + RMER17C LTR ERVK 87 343 -67 2 987 289 235 29 0 chrX 52702630 52702698 -113947598 - B4A SINE B4 -38 254 185 2 987 342 202 76 68 chrX 52703022 52703201 -113947095 - RMER4B LTR ERVK -330 255 23 2 987 225 0 0 0 chrX 52704110 52704135 -113946161 + (T)n Simple_repeat Simple_repeat 1 25 0 2 987 664 183 67 22 chrX 52704636 52704770 -113945526 + B1_Mur1 SINE Alu 2 141 -8 2 987 551 183 9 9 chrX 52705449 52705554 -113944742 + RMER15 LTR ERVL 1 105 -470 2 987 2354 173 12 50 chrX 52705539 52706019 -113944277 + RMER15 LTR ERVL 47 508 -67 2 987 225 336 63 9 chrX 52706099 52706210 -113944086 - RSINE1 SINE B4 -48 117 1 2 987 662 255 19 39 chrX 52706298 52706453 -113943843 - RSINE1 SINE B4 -2 163 12 2 987 303 189 0 3 chrX 52707225 52707299 -113942997 - Lx2 LINE L1 -7 6990 6931 2 987 264 231 25 37 chrX 52707488 52707569 -113942727 - MMERVK10C-int LTR ERVK -4782 2799 2720 2 987 272 340 18 48 chrX 52709782 52710054 -113940242 - RLTR45-int LTR ERVK -6812 432 169 2 987 618 220 42 0 chrX 52710607 52710725 -113939571 - ETnERV2-int LTR ERVK -214 7192 7070 2 987 3389 134 15 2 chrX 52710728 52711380 -113938916 - L1VL1 LINE L1 -2104 1594 934 2 987 1166 122 17 0 chrX 52711386 52711567 -113938729 - MTB LTR MaLR 0 400 217 2 987 4578 154 2 15 chrX 52711568 52712371 -113937925 - L1_Mm LINE L1 -541 5342 4550 2 987 13386 153 6 16 chrX 52712379 52714938 -113935358 + L1Md_F LINE L1 1130 3659 -2224 2 987 2220 198 2 22 chrX 52714935 52715380 -113934916 + L1Md_F LINE L1 5432 5867 -16 2 987 12469 134 12 8 chrX 52715386 52717422 -113932874 + RMER16-int LTR ERVK 2413 4456 -950 2 987 2659 76 6 3 chrX 52717422 52717766 -113932530 + IAPLTR4 LTR ERVK 1 345 0 2 987 882 223 5 30 chrX 52717766 52717969 -113932327 + IAPLTR3-int LTR ERVK 1 198 -6623 2 987 471 266 21 14 chrX 52717994 52718139 -113932157 + IAPLTR3-int LTR ERVK 337 482 -6339 2 987 36940 58 16 14 chrX 52718282 52724705 -113925591 - L1Md_T LINE L1 -158 6427 102 2 987 426 125 0 0 chrX 52724675 52724739 -113925557 - L1Md_T LINE L1 -6282 337 274 2 987 885 234 0 5 chrX 52724739 52724954 -113925342 - L1Md_T LINE L1 -6282 337 124 2 987 418 282 28 21 chrX 52724975 52725120 -113925176 + IAPLTR3-int LTR ERVK 337 482 -6339 2 987 1780 268 21 130 chrX 52725190 52725817 -113924479 + IAPLTR3-int LTR ERVK 440 954 -5867 2 987 1189 226 107 36 chrX 52725935 52726439 -113923857 + RMER16-int LTR ERVK 254 695 -5442 2 987 408 248 88 0 chrX 52726422 52726535 -113923761 + RMER16-int LTR ERVK 938 1060 -5077 2 987 342 256 0 55 chrX 52726548 52726639 -113923657 + ETnERV3-int LTR ERVK 2454 2539 -4867 2 987 6583 130 40 6 chrX 52726651 52728035 -113922261 + ETnERV3-int LTR ERVK 2735 4271 -3135 2 987 544 187 12 0 chrX 52728037 52728156 -113922140 + ETnERV3-int LTR ERVK 2357 2464 -2380 2 987 808 65 0 9 chrX 52728173 52728282 -113922014 + IAPLTR3-int LTR ERVK 4530 4637 -2944 2 987 5581 251 39 44 chrX 52728426 52730957 -113919339 + IAPLTR3-int LTR ERVK 5068 7317 -363 2 987 2681 75 0 3 chrX 52730957 52731303 -113918993 + IAPLTR4 LTR ERVK 1 345 0 2 987 1608 113 0 4 chrX 52731303 52731542 -113918754 + RMER16-int LTR ERVK 4451 4688 -718 2 987 3334 215 64 77 chrX 52731574 52733925 -113916371 + ETnERV2-int LTR ERVK 802 4088 -3318 2 987 10702 96 9 3 chrX 52733938 52736137 -113914159 - L1Md_F2 LINE L1 -2 6580 4368 2 987 3357 132 6 0 chrX 52736137 52736677 -113913619 + L1_Mm LINE L1 3361 3903 -1980 2 987 2969 195 38 63 chrX 52736681 52737587 -113912709 + MMETn-int LTR ERVK 2371 3437 -1969 2 987 1177 180 20 0 chrX 52737621 52737821 -113912475 + MMETn-int LTR ERVK 6222 6425 -981 2 987 341 167 27 14 chrX 52738033 52738106 -113912190 + MMETn-int LTR ERVK 7331 7404 -2 2 987 2124 166 10 35 chrX 52738107 52738512 -113911784 + RLTR9D LTR ERVK 1 395 -8 2 987 3670 142 30 13 chrX 52738518 52739144 -113911152 + RMER16-int LTR ERVK 4769 5405 -1 2 987 2835 143 18 4 chrX 52739144 52739625 -113910671 + RMER16 LTR ERVK 1 532 -1 2 987 250 208 0 0 chrX 52739626 52739679 -113910617 + L1M LINE L1 5366 5418 -879 2 987 2355 98 151 98 chrX 52739883 52740334 -113909962 + MT2C_Mm LTR ERVL 1 475 0 2 987 3475 116 14 0 chrX 52740334 52740845 -113909451 + MERVL-int LTR ERVL 1 518 -4967 2 987 315 121 17 0 chrX 52740848 52740906 -113909390 + L1_Mus2 LINE L1 6508 6566 0 2 987 234 0 0 0 chrX 52740922 52740948 -113909348 + (A)n Simple_repeat Simple_repeat 1 26 0 2 987 328 344 73 6 chrX 52741211 52741375 -113908921 - HAL1 LINE L1 -929 1578 1404 2 987 1688 227 24 28 chrX 52742174 52742772 -113907524 + L1_Mur2 LINE L1 907 1501 -4385 2 987 933 122 7 7 chrX 52742772 52742913 -113907383 + B1_Mus1 SINE Alu 2 142 -6 2 987 1641 253 32 92 chrX 52742913 52743327 -113906969 + L1_Mur2 LINE L1 1502 1882 -4004 2 987 1220 188 39 0 chrX 52743341 52743575 -113906721 + Lx5 LINE L1 5829 6071 -979 2 987 6801 42 6 0 chrX 52743633 52744450 -113905846 - RLTR13B2 LTR ERVK 0 822 1 2 987 33426 106 36 47 chrX 52744464 52746158 -113904138 - ETnERV3-int LTR ERVK -28 5780 4010 2 987 240 35 0 0 chrX 52746158 52746187 -113904109 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 2 987 33426 139 34 44 chrX 52746187 52750733 -113899563 - ETnERV3-int LTR ERVK -1799 4009 188 2 987 289 287 0 0 chrX 52750972 52751073 -113899223 - ETnERV3-int LTR ERVK -6874 379 279 2 987 1041 121 21 32 chrX 52751145 52751333 -113898963 - ETnERV3-int LTR ERVK -5622 186 1 2 987 6732 44 7 0 chrX 52751333 52752149 -113898147 - RLTR13B2 LTR ERVK 0 822 1 2 987 2592 224 25 18 chrX 52752149 52752755 -113897541 + Lx4B LINE L1 6169 6778 -280 2 987 21 57 0 0 chrX 52752755 52752790 -113897506 + AT_rich Low_complexity Low_complexity 1 35 0 2 987 10598 176 8 8 chrX 52753007 52754433 -113895863 + L1_Mm LINE L1 2104 3528 -2355 2 987 2477 139 7 17 chrX 52754433 52754842 -113895454 - RLTR9E LTR ERVK -4 405 1 2 987 10598 176 8 8 chrX 52754842 52755502 -113894794 + L1_Mm LINE L1 3529 4191 -1692 2 987 325 280 90 17 chrX 52755552 52755749 -113894547 + ETnERV3-int LTR ERVK 525 667 -5470 2 987 457 183 92 0 chrX 52755748 52755868 -113894428 + ETnERV3-int LTR ERVK 1719 1849 -5557 2 987 944 223 131 46 chrX 52755924 52756230 -113894066 - IAPEY3_LTR LTR ERVK 0 332 1 2 987 6345 123 23 8 chrX 52756298 52757443 -113892853 + ETnERV3-int LTR ERVK 2735 3950 -3456 2 987 4879 142 27 89 chrX 52757445 52758488 -113891808 - RLTR13A3 LTR ERVK 0 978 1 2 987 34093 100 18 27 chrX 52758496 52760282 -113890014 - ETnERV3-int LTR ERVK -9 5799 4010 2 987 333 0 0 0 chrX 52760282 52760319 -113889977 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 2 987 34093 107 17 27 chrX 52760319 52764101 -113886195 - ETnERV3-int LTR ERVK -1799 4009 186 2 987 1077 143 11 21 chrX 52764266 52764452 -113885844 - ETnERV3-int LTR ERVK -5622 186 3 2 987 3937 134 8 58 chrX 52764478 52765190 -113885106 - RLTR13A3 LTR ERVK -301 677 1 2 987 1036 209 15 0 chrX 52765192 52765393 -113884903 + ETnERV2-int LTR ERVK 4005 4208 -3198 2 987 412 232 11 35 chrX 52765430 52765560 -113884736 + ETnERV2-int LTR ERVK 2358 2464 -2380 2 987 722 104 78 50 chrX 52765569 52765710 -113884586 + MMERVK10C-int LTR ERVK 4525 4669 -2912 2 987 1909 220 15 39 chrX 52765820 52766480 -113883816 + MMERVK10C-int LTR ERVK 5068 5745 -1076 2 987 37538 34 0 0 chrX 52767321 52771899 -113878397 - L1Md_F LINE L1 -137 5749 1173 2 987 5515 185 48 22 chrX 52771905 52773594 -113876702 - L1Md_F LINE L1 -5411 1208 102 2 987 225 0 0 0 chrX 52773898 52773923 -113876373 + (T)n Simple_repeat Simple_repeat 1 25 0 2 987 554 223 62 35 chrX 52774426 52774570 -113875726 + B1_Mur1 SINE Alu 2 149 0 2 987 21 0 0 0 chrX 52775126 52775147 -113875149 + AT_rich Low_complexity Low_complexity 1 21 0 2 987 2196 190 25 75 chrX 52775238 52775768 -113874528 + RMER15 LTR ERVL 3 505 -70 2 987 3419 75 30 6 chrX 52775857 52776328 -113873968 + RLTR45 LTR ERVK 1 482 0 2 987 242 342 54 9 chrX 52776329 52776441 -113873855 - RSINE1 SINE B4 -48 117 1 2 987 667 256 19 38 chrX 52776528 52776686 -113873610 - RSINE1 SINE B4 -1 164 10 2 987 216 0 0 0 chrX 52776889 52776913 -113873383 + (T)n Simple_repeat Simple_repeat 1 24 0 2 987 1250 165 24 16 chrX 52777485 52777737 -113872559 - Lx2 LINE L1 -1 6996 6743 2 987 185 86 0 54 chrX 52777874 52777911 -113872385 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 2 987 436 327 28 32 chrX 52778454 52778672 -113871624 + RLTR45 LTR ERVK 266 482 0 2 987 356 386 0 9 chrX 52778933 52779048 -113871248 - PB1 SINE Alu -2 125 12 2 987 658 194 86 0 chrX 52779203 52779342 -113870954 + ORR1C2 LTR MaLR 232 382 -2 2 987 1782 195 22 3 chrX 52779423 52779778 -113870518 - MERVL_2A-int LTR ERVL -3505 2256 1895 2 987 4600 258 55 50 chrX 52779778 52781738 -113868558 + Lx6 LINE L1 5398 7362 -98 2 987 732 136 0 0 chrX 52781798 52781923 -113868373 + (GA)n Simple_repeat Simple_repeat 1 125 0 2 987 24 0 0 0 chrX 52782303 52782327 -113867969 + AT_rich Low_complexity Low_complexity 1 24 0 2 987 345 250 21 0 chrX 52783052 52783148 -113867148 - RMER19B LTR ERVK -2 900 803 2 987 3192 200 61 45 chrX 52783160 52784035 -113866261 + RMER17D LTR ERVK 1 889 0 2 987 2165 160 39 45 chrX 52784129 52784614 -113865682 + L1VL4 LINE L1 462 943 -5359 2 987 2365 136 16 7 chrX 52784601 52785044 -113865252 + MusHAL1 LINE L1 1023 1469 -1243 2 987 4150 213 55 37 chrX 52785066 52786251 -113864045 + MYSERV6-int LTR ERVK 2501 3706 -5253 2 987 1098 62 28 9 chrX 52786253 52786468 -113863828 + (TCTA)n Simple_repeat Simple_repeat 1 219 0 3 987 2573 214 0 3 chrX 52786468 52787046 -113863250 - L1_Mm LINE L1 -276 5607 5032 3 987 465 217 139 42 chrX 52787215 52787359 -113862937 + RLTR20B1 LTR ERVK 13 170 -393 3 987 580 220 34 11 chrX 52787405 52787584 -113862712 + L1_Mur3 LINE L1 1706 1888 -3992 3 987 1133 207 141 25 chrX 52787594 52787921 -113862375 + Lx5 LINE L1 5828 6192 -858 3 987 44039 14 6 1 chrX 52787927 52793152 -113857144 + RLTR6-int LTR ERV1 2530 7778 0 3 987 2229 125 217 26 chrX 52793261 52793721 -113856575 + RLTR6_Mm LTR ERV1 37 584 -70 3 987 5393 149 7 6 chrX 52793722 52794737 -113855559 + L1_Mus1 LINE L1 1592 2607 -3276 3 987 983 196 29 70 chrX 52794754 52794996 -113855300 - RLTR46 LTR ERVK -6 314 83 3 987 726 64 37 0 chrX 52795013 52795122 -113855174 - IAPEY3-int LTR ERVK 0 7680 7568 3 987 2443 60 5 0 chrX 52795135 52795458 -113854838 - RLTR10-int LTR ERVK -190 1797 1486 3 987 1554 117 11 41 chrX 52795460 52795728 -113854568 - IAPEY3-int LTR ERVK -151 7529 7270 3 987 1350 115 0 28 chrX 52795722 52795744 -113854552 - IAPEY3-int LTR ERVK -527 7054 7038 3 987 4367 22 0 0 chrX 52795744 52796237 -113854059 + MT2_Mm LTR ERVL 1 493 0 3 987 1350 115 0 28 chrX 52796237 52796429 -113853867 - IAPEY3-int LTR ERVK -544 7037 6846 3 987 513 149 0 0 chrX 52796436 52796523 -113853773 - IAPEY3-int LTR ERVK -1889 5692 5606 3 987 4508 223 9 14 chrX 52796518 52797789 -113852507 - IAPEY3-int LTR ERVK -1874 5707 4417 3 987 3111 273 33 20 chrX 52797786 52798790 -113851506 - IAPEY3-int LTR ERVK -6129 1551 535 3 987 1309 187 32 43 chrX 52798999 52799278 -113851018 - RLTR46 LTR ERVK -3 317 42 3 987 13974 162 7 12 chrX 52799291 52800218 -113850078 + L1_Mus1 LINE L1 2615 3532 -2351 3 987 2305 152 7 17 chrX 52800218 52800627 -113849669 - RLTR9E LTR ERVK -4 405 1 3 987 13974 162 7 12 chrX 52800627 52800639 -113849657 + L1_Mus1 LINE L1 3533 3533 -2350 3 987 1970 147 122 12 chrX 52800639 52801067 -113849229 + IAPLTR2_Mm LTR ERVK 1 475 0 3 987 13974 162 7 12 chrX 52801067 52802907 -113847389 + L1_Mus1 LINE L1 3533 5382 -501 3 987 5546 131 8 7 chrX 52802904 52803819 -113846477 + L1_Mus1 LINE L1 5652 6567 0 3 987 318 67 0 0 chrX 52803950 52803995 -113846301 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 987 453 293 70 14 chrX 52804079 52804221 -113846075 + B3 SINE B2 3 152 -64 3 987 229 262 0 90 chrX 52804253 52804320 -113845976 + ID_B1 SINE B4 94 154 -70 3 987 234 374 20 10 chrX 52804310 52804410 -113845886 + B3 SINE B2 107 207 -9 3 987 311 363 10 0 chrX 52805288 52805390 -113844906 - PB1D10 SINE Alu -14 103 1 3 987 417 141 10 20 chrX 52805991 52806092 -113844204 + (TA)n Simple_repeat Simple_repeat 2 101 0 3 987 208 147 0 0 chrX 52806256 52806290 -113844006 + (T)n Simple_repeat Simple_repeat 1 34 0 3 987 11447 144 13 2 chrX 52806737 52808109 -113842187 - L1_Mus3 LINE L1 -4 6634 5248 3 987 207 0 0 0 chrX 52808109 52808132 -113842164 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 987 11447 162 13 1 chrX 52808132 52809671 -113840625 - L1_Mus3 LINE L1 -636 5247 3688 3 987 384 232 162 0 chrX 52809706 52809805 -113840491 + B4A SINE B4 115 229 -63 3 987 1023 103 0 52 chrX 52809805 52809959 -113840337 + B1_Mus1 SINE Alu 2 147 -1 3 987 351 44 0 0 chrX 52809972 52810017 -113840279 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 987 819 283 6 0 chrX 52810281 52810461 -113839835 + B3 SINE B2 2 182 -34 3 987 24 0 0 0 chrX 52811513 52811537 -113838759 + AT_rich Low_complexity Low_complexity 1 24 0 3 987 327 25 0 0 chrX 52811818 52811858 -113838438 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 987 423 0 0 0 chrX 52811858 52811904 -113838392 + (GA)n Simple_repeat Simple_repeat 1 47 0 3 987 27 49 0 0 chrX 52812168 52812209 -113838087 + AT_rich Low_complexity Low_complexity 1 41 0 3 987 23 33 0 0 chrX 52812227 52812257 -113838039 + AT_rich Low_complexity Low_complexity 1 30 0 3 987 188 61 61 0 chrX 52813184 52813217 -113837079 + (TTTTTA)n Simple_repeat Simple_repeat 5 39 0 3 987 336 24 0 0 chrX 52813422 52813463 -113836833 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 987 4407 159 34 7 chrX 52813464 52814287 -113836009 - Lx LINE L1 -23 6631 5787 3 987 2346 162 28 2 chrX 52814284 52814779 -113835517 - L1_Mur2 LINE L1 -1123 4754 4247 3 987 3324 198 36 43 chrX 52814782 52816195 -113834101 - L1VL2 LINE L1 -2199 1416 22 3 987 541 266 132 6 chrX 52816231 52816405 -113833891 - L1VL2 LINE L1 -6063 272 77 3 987 661 319 84 19 chrX 52816540 52816802 -113833494 - B4A SINE B4 -3 289 11 3 987 993 226 19 0 chrX 52817041 52817253 -113833043 - B3 SINE B2 0 216 1 3 987 255 73 55 0 chrX 52817263 52817318 -113832978 + (TTTTTG)n Simple_repeat Simple_repeat 2 59 0 3 987 445 298 58 0 chrX 52817449 52817570 -113832726 - B1F SINE Alu -1 148 21 3 987 470 287 0 0 chrX 52817628 52817736 -113832560 - B3 SINE B2 -11 205 98 3 987 4173 152 21 21 chrX 52818592 52819384 -113830912 - YREP_Mm Unknown Unknown -35 1777 986 3 987 323 320 176 48 chrX 52819429 52819616 -113830680 - L2 LINE L2 -1162 2257 2047 3 987 438 358 45 0 chrX 52819826 52819960 -113830336 + B4A SINE B4 131 270 -22 3 987 185 343 75 9 chrX 52819990 52820096 -113830200 - L2 LINE L2 -1391 2028 1916 3 987 250 331 49 24 chrX 52820455 52820619 -113829677 - L2 LINE L2 -1758 1661 1494 3 987 21 0 0 0 chrX 52820764 52820785 -113829511 + AT_rich Low_complexity Low_complexity 1 21 0 3 123 5465 155 19 11 chrX 52821967 52822920 -113827376 - Lx3A LINE L1 -6 6975 6016 3 988 262 321 81 40 chrX 52823375 52823622 -113826674 + RMER17C LTR ERVK 87 343 -67 3 988 289 235 29 0 chrX 52824186 52824254 -113826042 - B4A SINE B4 -38 254 185 3 988 382 185 89 54 chrX 52824578 52824756 -113825540 - RMER4B LTR ERVK -330 255 23 3 988 227 350 35 122 chrX 52824924 52825178 -113825118 + RMER15 LTR ERVL 302 533 -42 3 988 627 200 68 23 chrX 52826183 52826316 -113823980 + B1_Mur1 SINE Alu 3 141 -8 3 988 515 202 9 9 chrX 52826996 52827101 -113823195 + RMER15 LTR ERVL 1 105 -470 3 988 2431 183 8 46 chrX 52827086 52827566 -113822730 + RMER15 LTR ERVL 47 508 -67 3 988 261 333 54 9 chrX 52827647 52827759 -113822537 - RSINE1 SINE B4 -48 117 1 3 988 662 262 19 39 chrX 52827847 52828002 -113822294 - RSINE1 SINE B4 -2 163 12 3 988 1108 216 25 0 chrX 52828783 52829024 -113821272 - Lx2 LINE L1 -7 6990 6744 3 988 21 57 0 0 chrX 52829531 52829566 -113820730 + AT_rich Low_complexity Low_complexity 1 35 0 3 988 8661 62 3 1 chrX 52829605 52831234 -113819062 - L1Md_F3 LINE L1 -257 6327 4695 3 988 5093 70 16 0 chrX 52831232 52831974 -113818322 + L1_Mm LINE L1 3734 4487 -1396 3 988 2275 179 8 10 chrX 52831970 52832467 -113817829 - L1_Mm LINE L1 -3583 2300 1805 3 988 3745 170 18 21 chrX 52832468 52833081 -113817215 - ETnERV2-int LTR ERVK -302 7104 6494 3 988 1099 305 18 18 chrX 52833133 52833527 -113816769 - RNERVK23-int LTR ERVK -413 7804 7411 3 988 752 324 50 45 chrX 52833190 52833695 -113816601 - MuRRS4-int LTR ERV1 -177 4886 4380 3 988 424 227 36 57 chrX 52834547 52834687 -113815609 - RNERVK23-int LTR ERVK -1886 6331 6195 3 988 1300 297 56 42 chrX 52835063 52835872 -113814424 - RNERVK23-int LTR ERVK -2477 5740 4567 3 988 297 271 41 33 chrX 52835848 52835970 -113814326 - RNERVK23-int LTR ERVK -3779 4438 4316 3 988 2165 300 52 47 chrX 52836167 52837543 -113812753 - RNERVK23-int LTR ERVK -4253 3964 1522 3 988 267 325 50 99 chrX 52838200 52838562 -113811734 - RNERVK23-int LTR ERVK -4524 1643 1300 3 988 282 327 26 55 chrX 52839586 52839858 -113810438 - RNERVK23-int LTR ERVK -6812 432 169 3 988 587 223 45 0 chrX 52840416 52840528 -113809768 - ETnERV2-int LTR ERVK -220 7186 7070 3 988 3703 118 9 2 chrX 52840531 52841174 -113809122 - L1VL1 LINE L1 -2104 1594 947 3 988 1196 122 17 0 chrX 52841183 52841364 -113808932 - MTB LTR MaLR 0 400 217 3 988 3249 164 14 0 chrX 52841365 52841937 -113808359 - L1_Mm LINE L1 -541 5342 4763 3 988 553 144 0 0 chrX 52841912 52842002 -113808294 - L1_Mm LINE L1 -1244 4639 4550 3 988 12110 141 1 42 chrX 52842010 52844224 -113806072 + L1VL1 LINE L1 1172 3302 -2581 3 988 285 169 7 175 chrX 52844236 52844379 -113805917 + MMERVK10C-int LTR ERVK 834 952 -6629 3 988 1307 213 106 35 chrX 52844497 52844991 -113805305 + RMER16-int LTR ERVK 254 685 -5452 3 988 457 221 88 0 chrX 52844983 52845096 -113805200 + RMER16-int LTR ERVK 938 1060 -5077 3 988 357 256 0 55 chrX 52845109 52845200 -113805096 + ETnERV3-int LTR ERVK 2454 2539 -4867 3 988 6770 120 43 10 chrX 52845209 52846545 -113803751 + ETnERV3-int LTR ERVK 2732 4189 -3217 3 988 5668 276 47 43 chrX 52846616 52849149 -113801147 + ETnERV3-int LTR ERVK 5068 7329 -351 3 988 2896 70 0 3 chrX 52849149 52849495 -113800801 + IAPLTR4 LTR ERVK 1 345 0 3 988 1699 105 0 8 chrX 52849495 52849736 -113800560 + RMER16-int LTR ERVK 4451 4689 -717 3 988 276 53 0 0 chrX 52849753 52849791 -113800505 + (T)n Simple_repeat Simple_repeat 1 38 0 3 988 3500 211 67 68 chrX 52849795 52852094 -113798202 + ETnERV2-int LTR ERVK 802 4088 -3318 3 988 3280 117 48 16 chrX 52852105 52852602 -113797694 - L1Md_F2 LINE L1 -2 6580 6068 3 988 4874 105 7 23 chrX 52852602 52853331 -113796965 - L1_Mm LINE L1 -799 5084 4368 3 988 5189 122 5 4 chrX 52853331 52854129 -113796167 + L1_Mm LINE L1 3361 4159 -1724 3 988 39409 7 0 1 chrX 52854128 52859905 -113790391 + L1Md_A LINE L1 1 5586 -297 3 988 9553 2 2 0 chrX 52859905 52860899 -113789397 + L1Md_A LINE L1 5587 6582 0 3 988 1124 108 6 6 chrX 52860900 52861077 -113789219 + L1_Mm LINE L1 4144 4320 -1563 3 988 3158 201 46 57 chrX 52861078 52862226 -113788070 + ETnERV2-int LTR ERVK 2369 3141 -1703 3 988 1155 190 20 0 chrX 52862260 52862460 -113787836 + ETnERV2-int LTR ERVK 6222 6425 -981 3 988 367 153 27 14 chrX 52862669 52862742 -113787554 + ETnERV2-int LTR ERVK 7331 7404 -2 3 988 2293 148 10 35 chrX 52862743 52863148 -113787148 + RLTR9D LTR ERVK 1 395 -8 3 988 3942 132 31 7 chrX 52863154 52863774 -113786522 + RMER16-int LTR ERVK 4769 5403 -3 3 988 2770 152 18 4 chrX 52863775 52864256 -113786040 + RMER16 LTR ERVK 1 532 -1 3 988 267 247 0 0 chrX 52864257 52864324 -113785972 + L1M LINE L1 5366 5432 -724 3 988 2295 94 213 103 chrX 52864514 52864942 -113785354 + MT2C_Mm LTR ERVL 1 475 0 3 988 3506 125 14 0 chrX 52864942 52865455 -113784841 + MERVL-int LTR ERVL 1 520 -4965 3 988 362 86 17 0 chrX 52865456 52865514 -113784782 + L1_Mus2 LINE L1 6508 6566 0 3 988 210 246 0 17 chrX 52865744 52865802 -113784494 + (CATA)n Simple_repeat Simple_repeat 2 58 0 3 988 21 0 0 0 chrX 52866075 52866096 -113784200 + AT_rich Low_complexity Low_complexity 1 21 0 3 988 1762 219 27 32 chrX 52866769 52867366 -113782930 + L1_Mur2 LINE L1 907 1508 -4378 3 988 980 130 7 20 chrX 52867366 52867515 -113782781 + B1_Mus1 SINE Alu 2 148 0 3 988 1692 243 36 107 chrX 52867515 52867956 -113782340 + L1_Mur2 LINE L1 1509 1900 -3986 3 988 1275 194 41 2 chrX 52867949 52868210 -113782086 + Lx5 LINE L1 5826 6098 -1598 3 988 7141 50 6 0 chrX 52868241 52869058 -113781238 - RLTR13B2 LTR ERVK 0 822 1 3 988 35585 101 38 31 chrX 52869072 52870762 -113779534 - ETnERV3-int LTR ERVK -28 5780 4010 3 988 207 69 0 0 chrX 52870762 52870791 -113779505 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 3 988 35585 134 35 30 chrX 52870791 52875242 -113775054 - ETnERV3-int LTR ERVK -1799 4009 188 3 988 312 287 0 0 chrX 52875480 52875581 -113774715 - ETnERV3-int LTR ERVK -6874 379 279 3 988 1044 139 22 27 chrX 52875653 52875838 -113774458 - ETnERV3-int LTR ERVK -5622 186 3 3 988 7322 42 5 0 chrX 52875840 52876658 -113773638 - RLTR13B2 LTR ERVK 0 822 1 3 988 2634 226 23 16 chrX 52876658 52877264 -113773032 + Lx4B LINE L1 6169 6778 -280 3 988 237 228 198 47 chrX 52877444 52877550 -113772746 + RLTR6_Mm LTR ERV1 1 122 -532 3 988 1998 119 258 38 chrX 52877552 52878005 -113772291 + RLTR6_Mm LTR ERV1 37 589 -65 3 988 62220 38 13 0 chrX 52878005 52885588 -113764708 + RLTR6-int LTR ERV1 3 7778 0 3 988 236 218 198 47 chrX 52885588 52885694 -113764602 + RLTR6_Mm LTR ERV1 1 122 -532 3 988 1992 118 262 36 chrX 52885696 52886143 -113764153 + RLTR6_Mm LTR ERV1 37 584 -70 3 988 14570 166 14 9 chrX 52886200 52887659 -113762637 + L1_Mm LINE L1 2074 3532 -2351 3 988 2653 144 7 17 chrX 52887659 52888068 -113762228 - RLTR9E LTR ERVK -4 405 1 3 988 14570 167 15 10 chrX 52888068 52889892 -113760404 + L1_Mm LINE L1 3529 5382 -501 3 988 3969 113 5 16 chrX 52889889 52890494 -113759802 + L1_Mus1 LINE L1 5652 6249 -318 3 988 380 276 42 25 chrX 52890494 52890613 -113759683 - B3 SINE B2 -95 121 1 3 988 305 348 71 0 chrX 52890759 52890871 -113759425 - B1F SINE Alu -1 148 29 3 988 457 287 0 0 chrX 52890935 52891043 -113759253 - B3 SINE B2 -11 205 98 4 988 4277 143 20 28 chrX 52891928 52892725 -113757571 - YREP_Mm Unknown Unknown -36 1776 986 4 988 350 315 170 53 chrX 52892770 52892958 -113757338 - L2 LINE L2 -1163 2256 2047 4 988 256 312 37 12 chrX 52892965 52893046 -113757250 + B4A SINE B4 2 84 -208 4 988 504 364 39 0 chrX 52893168 52893322 -113756974 + B4A SINE B4 131 290 -2 4 988 6366 88 2 0 chrX 52893857 52894731 -113755565 - L1Md_F2 LINE L1 -366 5517 4642 4 988 3964 68 4 0 chrX 52894732 52895333 -113754963 + L1Md_F2 LINE L1 5501 6103 -479 4 988 1105 251 29 16 chrX 52895333 52895649 -113754647 + RLTR46 LTR ERVK 1 320 0 4 988 615 269 18 26 chrX 52896271 52896500 -113753796 + LSU-rRNA_Hsa rRNA rRNA 527 753 -4282 4 988 427 182 235 11 chrX 52896989 52897172 -113753124 + MMERVK10C-int LTR ERVK 413 636 -4770 4 988 302 136 30 17 chrX 52897233 52897310 -113752986 + MMERVK10C-int LTR ERVK 1727 1780 -5626 4 988 706 190 0 7 chrX 52897307 52897445 -113752851 + MMERVK10C-int LTR ERVK 1924 2060 -5521 4 988 2367 109 176 6 chrX 52897456 52898086 -113752210 + MMERVK10C-int LTR ERVK 2193 2929 -4652 4 988 30091 122 15 17 chrX 52898086 52902621 -113747675 + MMERVK10C-int LTR ERVK 3058 7579 -2 4 988 1112 254 33 23 chrX 52902622 52902910 -113747386 + RLTR46 LTR ERVK 1 291 -29 4 988 2693 67 0 3 chrX 52902910 52903253 -113747043 + IAPLTR4 LTR ERVK 4 345 0 4 988 1112 254 33 23 chrX 52903253 52903266 -113747030 + RLTR46 LTR ERVK 292 305 -15 4 988 431 228 9 38 chrX 52903267 52903372 -113746924 + MMERVK10C-int LTR ERVK 16 117 -6704 4 988 410 210 8 56 chrX 52903373 52903499 -113746797 + MMERVK10C-int LTR ERVK 835 954 -5867 4 988 306 197 39 93 chrX 52903475 52903604 -113746692 + MMERVK10C-int LTR ERVK 830 951 -6630 4 988 1066 215 77 103 chrX 52903735 52904057 -113746239 + ETnERV3-int LTR ERVK 255 570 -4836 4 988 180 0 0 0 chrX 52904057 52904077 -113746219 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 988 1066 250 77 90 chrX 52904077 52904219 -113746077 + ETnERV3-int LTR ERVK 571 623 -4783 4 988 492 175 92 0 chrX 52904243 52904363 -113745933 + ETnERV3-int LTR ERVK 1719 1849 -5557 4 988 267 246 0 68 chrX 52904398 52904472 -113745824 + ETnERV3-int LTR ERVK 2471 2539 -4867 4 988 6695 109 19 11 chrX 52904484 52905637 -113744659 + ETnERV3-int LTR ERVK 2735 3950 -3456 4 988 981 189 17 73 chrX 52905639 52905873 -113744423 - RLTR13A3 LTR ERVK 0 978 758 4 988 628 50 2 6 chrX 52905873 52905959 -113744337 - RLTR13A3 LTR ERVK -810 83 1 4 988 34174 99 19 27 chrX 52905967 52907756 -113742540 - ETnERV3-int LTR ERVK -9 5799 4010 4 988 297 0 0 0 chrX 52907756 52907789 -113742507 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 4 988 34174 107 18 26 chrX 52907789 52911566 -113738730 - ETnERV3-int LTR ERVK -1799 4009 186 4 988 992 149 16 27 chrX 52911727 52911913 -113738383 - ETnERV3-int LTR ERVK -5622 186 3 4 988 4737 154 24 72 chrX 52911915 52912942 -113737354 - RLTR13A3 LTR ERVK 0 978 1 4 988 1184 188 10 0 chrX 52912944 52913146 -113737150 + MMERVK10C-int LTR ERVK 4005 4208 -3198 4 988 443 206 9 36 chrX 52913185 52913296 -113737000 + MMETn-int LTR ERVK 2357 2464 -2380 4 988 768 94 85 8 chrX 52913320 52913449 -113736847 + MMERVK10C-int LTR ERVK 4523 4661 -2920 4 988 1835 184 0 82 chrX 52913591 52913993 -113736303 + MMERVK10C-int LTR ERVK 5098 5466 -2115 4 988 6531 63 5 1 chrX 52913996 52914848 -113735448 + RLTR13A LTR ERVK 1 855 0 4 988 563 304 18 20 chrX 52914851 52915136 -113735160 + MMERVK10C-int LTR ERVK 5526 5745 -1076 4 988 629 283 25 40 chrX 52915320 52915596 -113734700 + IAPLTR3-int LTR ERVK 5472 5743 -799 4 988 5947 206 2 7 chrX 52915927 52916984 -113733312 + IAPLTR3-int LTR ERVK 5750 6801 -20 4 988 2632 81 0 3 chrX 52916984 52917330 -113732966 + IAPLTR4 LTR ERVK 1 345 0 4 988 23 68 0 0 chrX 52917924 52917968 -113732328 + AT_rich Low_complexity Low_complexity 1 44 0 4 988 518 326 28 0 chrX 52918186 52918364 -113731932 - B4A SINE B4 -38 254 72 4 988 429 149 97 28 chrX 52918622 52918777 -113731519 - RMER4B LTR ERVK -338 247 33 4 988 297 0 0 0 chrX 52918777 52918810 -113731486 + (T)n Simple_repeat Simple_repeat 1 33 0 4 988 437 305 97 93 chrX 52918934 52919223 -113731073 + RMER15 LTR ERVL 244 533 -42 4 988 554 223 62 35 chrX 52920225 52920369 -113729927 + B1_Mur1 SINE Alu 2 149 0 4 988 21 0 0 0 chrX 52920925 52920946 -113729350 + AT_rich Low_complexity Low_complexity 1 21 0 4 988 2334 183 15 80 chrX 52921035 52921575 -113728721 + RMER15 LTR ERVL 1 505 -70 4 988 222 369 54 9 chrX 52921659 52921771 -113728525 - RSINE1 SINE B4 -48 117 1 4 988 641 294 19 13 chrX 52921861 52922016 -113728280 - RSINE1 SINE B4 0 165 10 4 988 1192 155 28 24 chrX 52922789 52923040 -113727256 - Lx2 LINE L1 -3 6994 6743 4 988 228 86 0 0 chrX 52923176 52923211 -113727085 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 4 988 520 324 27 31 chrX 52923747 52923970 -113726326 + RLTR45 LTR ERVK 261 482 0 4 988 379 377 0 9 chrX 52924231 52924346 -113725950 - PB1 SINE Alu -2 125 12 4 988 646 218 78 0 chrX 52924501 52924643 -113725653 + ORR1C2 LTR MaLR 232 384 0 4 988 1849 203 22 3 chrX 52924722 52925077 -113725219 - MERVL_2A-int LTR ERVL -3505 2256 1895 4 988 5332 258 51 49 chrX 52925077 52927020 -113723276 + Lx6 LINE L1 5398 7338 -122 4 988 285 227 27 0 chrX 52927606 52927681 -113722615 - RMER19B LTR ERVK -2 900 824 4 988 216 247 11 56 chrX 52927683 52927773 -113722523 + CT-rich Low_complexity Low_complexity 4 89 0 4 988 3521 182 60 38 chrX 52927799 52928669 -113721627 + RMER17D LTR ERVK 1 889 0 4 988 2153 164 65 47 chrX 52928763 52929128 -113721168 + L1VL4 LINE L1 462 806 -5496 4 988 216 0 0 0 chrX 52929128 52929152 -113721144 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 988 2153 164 65 47 chrX 52929152 52929259 -113721037 + L1VL4 LINE L1 807 942 -5360 4 988 2651 126 7 11 chrX 52929246 52929695 -113720601 + MusHAL1 LINE L1 1023 1469 -1243 4 988 4629 201 53 40 chrX 52929717 52930879 -113719417 + MYSERV6-int LTR ERVK 2501 3678 -5281 4 988 932 66 18 9 chrX 52930907 52931134 -113719162 + (TCTA)n Simple_repeat Simple_repeat 1 228 0 4 988 2957 188 2 0 chrX 52931156 52931709 -113718587 - L1_Mm LINE L1 -298 5585 5032 4 988 284 237 74 25 chrX 52931733 52931854 -113718442 + RMER6-int LTR ERVK 2703 2829 -348 4 988 522 226 26 58 chrX 52931875 52932034 -113718262 + RLTR20B2 LTR ERVK 23 169 -382 4 988 671 215 34 11 chrX 52932069 52932248 -113718048 + L1_Mur3 LINE L1 1706 1888 -3992 4 988 4141 220 46 8 chrX 52932258 52933151 -113717145 + Lx5 LINE L1 5828 6754 -296 4 988 23 54 0 0 chrX 52933378 52933415 -113716881 + AT_rich Low_complexity Low_complexity 1 37 0 4 988 512 227 18 0 chrX 52933473 52933583 -113716713 + Lx4A LINE L1 6719 6830 -228 4 988 2049 207 88 61 chrX 52933582 52934174 -113716122 + L1_Mm LINE L1 4601 5208 -675 4 988 1718 221 49 95 chrX 52934168 52934927 -113715369 + L1Md_F2 LINE L1 423 1146 -5578 4 988 29580 9 0 0 chrX 52934924 52938295 -113712001 - L1Md_A LINE L1 -249 5634 2264 4 988 8064 15 0 1 chrX 52938295 52939215 -113711081 + L1Md_A LINE L1 5664 6582 0 4 988 35146 67 3 5 chrX 52939216 52943376 -113706920 + L1Md_F2 LINE L1 1099 5234 -649 4 988 243 0 0 0 chrX 52943376 52943403 -113706893 + (TA)n Simple_repeat Simple_repeat 1 27 0 4 988 8031 70 8 0 chrX 52943403 52943746 -113706550 + L1Md_F2 LINE L1 5235 5584 -299 4 988 7610 59 11 0 chrX 52943746 52944719 -113705577 + L1Md_F2 LINE L1 5587 6570 -12 4 988 3517 168 8 2 chrX 52944741 52945357 -113704939 + L1_Mm LINE L1 5190 5809 -74 4 988 21045 155 9 8 chrX 52945347 52947325 -113702971 + L1_Mus1 LINE L1 1563 3532 -2351 4 988 2360 149 5 17 chrX 52947325 52947735 -113702561 - RLTR9E LTR ERVK -4 405 1 4 988 21045 155 9 8 chrX 52947735 52949572 -113700724 + L1_Mus1 LINE L1 3533 5382 -501 4 988 6130 124 6 7 chrX 52949569 52950486 -113699810 + L1_Mus1 LINE L1 5652 6567 0 4 988 405 0 0 0 chrX 52950624 52950669 -113699627 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 988 397 329 71 7 chrX 52950752 52950893 -113699403 + B3 SINE B2 3 152 -64 4 988 225 220 0 107 chrX 52950917 52950973 -113699323 + B4A SINE B4 92 141 -151 4 988 249 364 20 10 chrX 52950982 52951082 -113699214 + B3 SINE B2 107 207 -9 4 988 304 386 0 0 chrX 52951940 52952041 -113698255 - PB1D10 SINE Alu -16 101 1 4 988 372 133 0 0 chrX 52952617 52952677 -113697619 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 989 17918 188 10 77 chrX 52953335 52958926 -113691370 - L1_Mus3 LINE L1 -4 6634 1448 4 989 21 36 0 0 chrX 52959133 52959161 -113691135 + AT_rich Low_complexity Low_complexity 1 28 0 4 989 439 268 17 43 chrX 52959191 52959308 -113690988 + ID_B1 SINE B4 102 215 -9 4 989 21 36 0 0 chrX 52959559 52959587 -113690709 + AT_rich Low_complexity Low_complexity 1 28 0 4 989 258 300 0 0 chrX 52959600 52959650 -113690646 - ID4 SINE ID -28 55 6 4 989 1331 92 22 0 chrX 52959772 52959956 -113690340 + B2_Mm2 SINE B2 1 188 -7 4 989 253 0 54 0 chrX 52960146 52960183 -113690113 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 989 451 276 101 77 chrX 52960534 52960633 -113689663 + B4A SINE B4 115 229 -63 4 989 900 158 0 0 chrX 52960633 52960779 -113689517 + B1_Mus1 SINE Alu 2 147 -1 4 989 549 30 0 0 chrX 52960789 52960856 -113689440 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 989 451 276 101 77 chrX 52960856 52960914 -113689382 + B4A SINE B4 230 287 -5 4 989 867 287 0 0 chrX 52961103 52961284 -113689012 + B3 SINE B2 2 182 -34 4 989 246 312 81 30 chrX 52962086 52962185 -113688111 - B1F SINE Alu -32 117 14 4 989 27 0 0 0 chrX 52962345 52962372 -113687924 + AT_rich Low_complexity Low_complexity 1 27 0 4 989 450 0 0 0 chrX 52962648 52962698 -113687598 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 989 573 15 0 0 chrX 52962698 52962763 -113687533 + (GA)n Simple_repeat Simple_repeat 1 66 0 4 989 732 52 0 0 chrX 52962932 52963029 -113687267 + (GA)n Simple_repeat Simple_repeat 1 97 0 4 989 30 0 0 0 chrX 52963354 52963384 -113686912 + AT_rich Low_complexity Low_complexity 1 30 0 4 989 4811 143 46 6 chrX 52964342 52965174 -113685122 - Lx LINE L1 -1 6653 5789 4 989 15540 185 16 42 chrX 52965175 52967183 -113683113 - L1VL2 LINE L1 -1125 4758 2800 4 989 825 154 7 0 chrX 52967183 52967319 -113682977 - B1_Mus2 SINE Alu -10 137 1 4 989 15540 200 26 56 chrX 52967319 52969907 -113680389 - L1VL2 LINE L1 -3084 2799 301 4 989 586 283 132 6 chrX 52969913 52970087 -113680209 - L1VL2 LINE L1 -6063 272 77 4 989 580 331 84 19 chrX 52970222 52970484 -113679812 - B4A SINE B4 -3 289 11 4 989 921 241 19 0 chrX 52970725 52970932 -113679364 - B3 SINE B2 -5 211 1 4 989 275 49 0 24 chrX 52970941 52970983 -113679313 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 4 989 395 314 58 0 chrX 52971115 52971236 -113679060 - B1F SINE Alu -1 148 21 4 989 455 287 0 0 chrX 52971294 52971402 -113678894 - B3 SINE B2 -11 205 98 4 989 3645 154 23 25 chrX 52972258 52972949 -113677347 - YREP_Mm Unknown Unknown -35 1777 1088 4 989 578 61 0 0 chrX 52973079 52973161 -113677135 - YREP_Mm Unknown Unknown -745 1067 986 4 989 345 347 154 35 chrX 52973166 52973393 -113676903 - L2 LINE L2 -1119 2300 2047 4 989 438 351 45 0 chrX 52973602 52973736 -113676560 + B4A SINE B4 131 270 -22 4 989 281 312 49 24 chrX 52974227 52974391 -113675905 - L2 LINE L2 -1758 1661 1494 4 989 5666 151 3 11 chrX 52975731 52976698 -113673598 - Lx3A LINE L1 -7 6974 6016 4 989 29711 7 0 0 chrX 52977039 52980419 -113669877 + L1Md_A LINE L1 2207 5586 -297 4 989 8843 11 0 0 chrX 52980419 52981412 -113668884 + L1Md_A LINE L1 5587 6579 -3 4 989 241 328 77 36 chrX 52981553 52981800 -113668496 + RMER17C LTR ERVK 87 343 -67 4 989 289 235 29 0 chrX 52982361 52982429 -113667867 - B4A SINE B4 -38 254 185 4 989 355 183 101 28 chrX 52982770 52982919 -113667377 - RMER4B LTR ERVK -344 241 33 4 989 233 330 0 26 chrX 52983099 52983214 -113667082 + RMER15 LTR ERVL 302 413 -162 4 989 219 146 0 0 chrX 52983234 52983275 -113667021 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 4 989 615 198 67 22 chrX 52984356 52984490 -113665806 + B1_Mur1 SINE Alu 2 141 -8 4 989 537 192 9 9 chrX 52985170 52985275 -113665021 + RMER15 LTR ERVL 1 105 -470 4 989 2327 188 8 46 chrX 52985260 52985740 -113664556 + RMER15 LTR ERVL 47 508 -67 4 989 250 342 54 9 chrX 52985821 52985933 -113664363 - RSINE1 SINE B4 -48 117 1 5 989 646 262 19 39 chrX 52986021 52986176 -113664120 - RSINE1 SINE B4 -2 163 12 5 989 9156 59 3 1 chrX 52986585 52988041 -113662255 - L1Md_F3 LINE L1 -431 6153 4695 5 989 5340 68 18 0 chrX 52988039 52988780 -113661516 + L1_Mm LINE L1 3734 4487 -1396 5 989 2432 175 8 10 chrX 52988776 52989273 -113661023 - L1_Mm LINE L1 -3583 2300 1805 5 989 3759 163 16 21 chrX 52989274 52989888 -113660408 - ETnERV2-int LTR ERVK -302 7104 6494 5 989 1147 325 23 19 chrX 52989940 52990463 -113659833 - RNERVK23-int LTR ERVK -413 7804 7280 5 989 311 277 0 0 chrX 52991348 52991431 -113658865 - RLTR6-int LTR ERV1 -1543 6235 6153 5 989 425 265 15 36 chrX 52991357 52991494 -113658802 - RNERVK23-int LTR ERVK -1889 6328 6195 5 989 1233 304 48 41 chrX 52991870 52992658 -113657638 - RNERVK23-int LTR ERVK -2513 5704 4586 5 989 2154 300 60 54 chrX 52992653 52994363 -113655933 - RNERVK23-int LTR ERVK -2512 4309 2696 5 989 283 306 31 37 chrX 52996502 52996665 -113653631 - RLTR45-int LTR ERVK -6914 330 169 5 989 3427 133 7 1 chrX 52997339 52997982 -113652314 - L1VL1 LINE L1 -2104 1594 947 5 989 1205 116 17 0 chrX 52997992 52998173 -113652123 - MTB LTR MaLR 0 400 217 5 989 4622 152 2 12 chrX 52998174 52998975 -113651321 - L1_Mm LINE L1 -541 5342 4550 5 989 399 81 0 16 chrX 52998983 52999046 -113651250 + L1Md_F LINE L1 1172 1233 -5383 5 989 186 156 0 0 chrX 52999046 52999091 -113651205 + A-rich Low_complexity Low_complexity 1 45 0 5 989 4826 144 6 3 chrX 52999100 53000000 -113650296 + L1Md_F LINE L1 1220 2121 -3762 5 989 8630 156 1 19 chrX 53000001 53001567 -113648729 + L1_Mm LINE L1 2123 3659 -2224 1 989 2170 196 28 21 chrX 53001564 53001997 -113648299 + L1_Mm LINE L1 5432 5867 -16 1 989 12055 140 11 18 chrX 53002002 53004056 -113646240 + RMER16-int LTR ERVK 2413 4453 -953 2 989 2724 58 9 3 chrX 53004056 53004399 -113645897 + IAPLTR4 LTR ERVK 1 345 0 3 989 2029 272 48 83 chrX 53004399 53005475 -113644821 + IAPLTR3-int LTR ERVK 1 954 -5867 3 989 1208 228 103 34 chrX 53005593 53006088 -113644208 + RMER16-int LTR ERVK 254 685 -5452 4 989 452 230 88 0 chrX 53006080 53006193 -113644103 + RMER16-int LTR ERVK 938 1060 -5077 4 989 342 256 0 55 chrX 53006206 53006297 -113643999 + ETnERV3-int LTR ERVK 2454 2539 -4867 5 989 6587 113 19 13 chrX 53006310 53007467 -113642829 + ETnERV3-int LTR ERVK 2736 3952 -3454 5 989 4910 146 27 72 chrX 53007467 53008491 -113641805 - RLTR13A3 LTR ERVK 0 978 1 6 989 34122 97 23 25 chrX 53008499 53010285 -113640011 - ETnERV3-int LTR ERVK -9 5799 4011 6 989 288 53 0 0 chrX 53010285 53010323 -113639973 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 7 989 34122 106 22 24 chrX 53010323 53014069 -113636227 - ETnERV3-int LTR ERVK -1798 4010 186 6 989 1012 154 11 21 chrX 53014233 53014419 -113635877 - ETnERV3-int LTR ERVK -5622 186 3 6 989 4803 152 27 72 chrX 53014421 53015445 -113634851 - RLTR13A3 LTR ERVK 0 978 1 6 989 1035 209 15 0 chrX 53015447 53015648 -113634648 + IAPLTR3-int LTR ERVK 4005 4208 -3198 8 989 386 238 11 35 chrX 53015685 53015815 -113634481 + IAPLTR3-int LTR ERVK 2357 2464 -2380 8 989 789 87 86 8 chrX 53015823 53015951 -113634345 + MMERVK10C-int LTR ERVK 4524 4661 -2920 9 989 5818 270 47 44 chrX 53016075 53018625 -113631671 + IAPLTR3-int LTR ERVK 3468 7324 -356 8 989 2461 89 27 3 chrX 53018625 53018962 -113631334 + IAPLTR4 LTR ERVK 1 345 0 8 989 516 285 62 5 chrX 53019817 53020030 -113630266 - B4A SINE B4 -38 254 1 1 989 324 162 24 36 chrX 53020322 53020365 -113629931 - RMER4B LTR ERVK -471 114 72 1 989 261 0 0 0 chrX 53020365 53020394 -113629902 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 989 324 162 24 36 chrX 53020394 53020433 -113629863 - RMER4B LTR ERVK -514 71 35 1 989 360 312 60 60 chrX 53020614 53020846 -113629450 + RMER15 LTR ERVL 302 533 -42 1 989 515 225 69 42 chrX 53021853 53021997 -113628299 + B1_Mur1 SINE Alu 2 149 0 1 989 21 0 0 0 chrX 53022545 53022566 -113627730 + AT_rich Low_complexity Low_complexity 1 21 0 1 989 2153 199 28 78 chrX 53022657 53023186 -113627110 + RMER15 LTR ERVL 3 505 -70 1 989 667 256 19 38 chrX 53023469 53023627 -113626669 - RSINE1 SINE B4 -1 164 10 1 989 249 98 0 0 chrX 53023821 53023862 -113626434 + (TTTTTG)n Simple_repeat Simple_repeat 4 44 0 1 989 1262 158 24 12 chrX 53024434 53024684 -113625612 - Lx2 LINE L1 -2 6995 6743 1 989 200 86 0 28 chrX 53024821 53024857 -113625439 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 2 989 481 313 28 32 chrX 53025399 53025617 -113624679 + RLTR45 LTR ERVK 266 482 0 2 989 329 404 0 9 chrX 53025890 53026005 -113624291 - PB1 SINE Alu -2 125 12 2 989 655 207 79 0 chrX 53026160 53026300 -113623996 + ORR1C2 LTR MaLR 232 382 -2 2 989 1827 206 22 3 chrX 53026381 53026736 -113623560 - MERVL_2A-int LTR ERVL -3505 2256 1895 2 989 4821 266 53 48 chrX 53026736 53028695 -113621601 + Lx6 LINE L1 5398 7362 -98 2 989 642 138 0 0 chrX 53028755 53028864 -113621432 + (GA)n Simple_repeat Simple_repeat 1 109 0 2 989 24 0 0 0 chrX 53029244 53029268 -113621028 + AT_rich Low_complexity Low_complexity 1 24 0 2 989 261 266 42 11 chrX 53029992 53030087 -113620209 - RMER19B LTR ERVK -2 900 803 2 989 3130 196 61 43 chrX 53030099 53030973 -113619323 + RMER17D LTR ERVK 1 889 0 2 989 2395 149 39 45 chrX 53031067 53031552 -113618744 + L1VL4 LINE L1 462 943 -5359 3 989 2560 138 9 5 chrX 53031539 53031984 -113618312 + MusHAL1 LINE L1 1023 1469 -1243 3 989 4381 216 52 47 chrX 53032006 53032185 -113618111 + MYSERV6-int LTR ERVK 2501 2676 -6283 3 989 8657 16 5 0 chrX 53032185 53033174 -113617122 + L1Md_A LINE L1 5587 6580 -2 3 989 4381 216 52 47 chrX 53033174 53034193 -113616103 + MYSERV6-int LTR ERVK 2677 3706 -5253 3 989 1042 91 23 0 chrX 53034197 53034373 -113615923 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 3 989 2801 205 11 0 chrX 53034396 53034966 -113615330 - L1_Mm LINE L1 -276 5607 5032 3 989 449 217 139 42 chrX 53035135 53035279 -113615017 + RLTR20B1 LTR ERVK 13 170 -393 3 989 621 226 34 11 chrX 53035323 53035502 -113614794 + L1_Mur3 LINE L1 1706 1888 -3992 3 989 3681 234 63 16 chrX 53035512 53036397 -113613899 + Lx5 LINE L1 5828 6754 -296 3 989 23 54 0 0 chrX 53036630 53036667 -113613629 + AT_rich Low_complexity Low_complexity 1 37 0 3 989 456 246 18 0 chrX 53036726 53036836 -113613460 + Lx4A LINE L1 6719 6830 -228 4 989 5731 176 35 19 chrX 53036835 53038164 -113612132 + L1_Mus3 LINE L1 4601 5948 -690 4 989 6239 146 4 8 chrX 53038172 53039283 -113611013 + L1_Mus1 LINE L1 1502 2607 -3276 4 989 979 179 37 78 chrX 53039300 53039542 -113610754 - RLTR46 LTR ERVK -6 314 83 4 989 705 92 37 0 chrX 53039559 53039668 -113610628 - IAPEY3-int LTR ERVK 0 7680 7568 4 989 2530 61 0 3 chrX 53039692 53040005 -113610291 - RLTR10-int LTR ERVK -190 1797 1486 4 989 3017 167 3 84 chrX 53040007 53040648 -113609648 - IAPEY3-int LTR ERVK -147 7434 6846 4 989 4905 222 9 17 chrX 53040661 53041926 -113608370 - IAPEY3-int LTR ERVK -1882 5699 4417 4 989 3188 276 46 20 chrX 53041923 53042914 -113607382 - IAPEY3-int LTR ERVK -6129 1551 535 4 989 180 0 0 0 chrX 53043013 53043033 -113607263 + (A)n Simple_repeat Simple_repeat 1 20 0 4 989 1302 176 33 44 chrX 53043133 53043407 -113606889 - RLTR46 LTR ERVK -8 312 42 4 989 14362 155 27 19 chrX 53043420 53044347 -113605949 + L1_Mus1 LINE L1 2615 3532 -2351 4 989 2369 142 7 17 chrX 53044347 53044756 -113605540 - RLTR9E LTR ERVK -4 405 1 4 989 14362 155 27 19 chrX 53044756 53044768 -113605528 + L1_Mus1 LINE L1 3533 3533 -2350 4 989 1881 139 138 28 chrX 53044768 53045196 -113605100 + IAPLTR2_Mm LTR ERVK 1 475 0 4 989 14362 155 27 19 chrX 53045196 53046900 -113603396 + L1_Mus1 LINE L1 3533 5283 -600 4 989 8821 9 0 0 chrX 53046900 53047887 -113602409 + L1Md_A LINE L1 5596 6582 0 5 989 14362 155 27 19 chrX 53047887 53047987 -113602309 + L1_Mus1 LINE L1 5284 5382 -501 4 989 6112 117 8 7 chrX 53047984 53048899 -113601397 + L1_Mus1 LINE L1 5652 6567 0 4 989 480 72 0 0 chrX 53049030 53049099 -113601197 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 989 470 286 70 14 chrX 53049183 53049325 -113600971 + B3 SINE B2 3 152 -64 5 989 236 246 0 90 chrX 53049357 53049424 -113600872 + ID_B1 SINE B4 94 154 -70 5 989 243 374 20 10 chrX 53049414 53049514 -113600782 + B3 SINE B2 107 207 -9 5 989 253 343 39 0 chrX 53050389 53050491 -113599805 - PB1D9 SINE Alu -14 106 1 5 989 319 133 0 0 chrX 53051066 53051111 -113599185 + HAL1-3A_ME LINE L1 1968 2012 -846 5 989 369 183 9 19 chrX 53051111 53051217 -113599079 + (TA)n Simple_repeat Simple_repeat 2 106 0 5 989 208 147 0 0 chrX 53051381 53051415 -113598881 + (T)n Simple_repeat Simple_repeat 1 34 0 5 989 12470 148 8 10 chrX 53051862 53054819 -113595477 - L1_Mus3 LINE L1 -3 6635 3687 5 989 398 222 162 0 chrX 53054854 53054953 -113595343 + B4A SINE B4 115 229 -63 6 989 995 96 0 58 chrX 53054953 53055108 -113595188 + B1_Mus1 SINE Alu 2 147 -1 6 989 384 22 0 0 chrX 53055127 53055172 -113595124 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 989 820 298 0 0 chrX 53055437 53055618 -113594678 + B3 SINE B2 2 182 -34 6 989 225 294 134 60 chrX 53056541 53056675 -113593621 - B1F SINE Alu -2 147 4 6 989 23 0 0 0 chrX 53056676 53056699 -113593597 + AT_rich Low_complexity Low_complexity 1 23 0 6 989 420 20 0 0 chrX 53056995 53057044 -113593252 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 989 26 50 0 0 chrX 53057309 53057349 -113592947 + AT_rich Low_complexity Low_complexity 1 40 0 6 989 23 33 0 0 chrX 53057367 53057397 -113592899 + AT_rich Low_complexity Low_complexity 1 30 0 6 989 21 36 0 0 chrX 53058312 53058340 -113591956 + AT_rich Low_complexity Low_complexity 1 28 0 6 989 4752 156 32 8 chrX 53058342 53059189 -113591107 - Lx LINE L1 -1 6653 5787 7 989 2393 161 24 0 chrX 53059190 53059682 -113590614 - L1_Mur2 LINE L1 -1127 4750 4247 7 989 3116 197 51 43 chrX 53059685 53061255 -113589041 - L1VL2 LINE L1 -2199 1416 22 7 989 452 276 118 7 chrX 53061405 53061540 -113588756 - B4A SINE B4 -3 289 140 7 989 954 237 19 0 chrX 53061895 53062102 -113588194 - B3 SINE B2 -5 211 1 7 989 195 114 0 0 chrX 53062112 53062147 -113588149 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 7 989 371 292 66 16 chrX 53062279 53062401 -113587895 - B1F SINE Alu -1 148 21 7 989 443 296 0 0 chrX 53062461 53062569 -113587727 - B3 SINE B2 -13 203 96 7 989 4311 144 23 21 chrX 53063453 53064243 -113586053 - YREP_Mm Unknown Unknown -36 1776 986 7 989 400 336 150 26 chrX 53064248 53064474 -113585822 - L2 LINE L2 -1119 2300 2047 7 989 2334 70 37 12 chrX 53064493 53064825 -113585471 + RLTR10C LTR ERVK 98 436 0 8 989 1376 61 0 0 chrX 53064825 53065005 -113585291 + MMERVK10C-int LTR ERVK 1 180 -7401 8 989 235 163 23 0 chrX 53065005 53065048 -113585248 + RLTR27 LTR ERVK 231 274 -35 8 989 366 0 0 0 chrX 53065048 53065090 -113585206 + MMERVK10C-int LTR ERVK 226 267 -7314 8 989 260 171 12 35 chrX 53065173 53065258 -113585038 + A-rich Low_complexity Low_complexity 2 84 0 8 989 330 89 0 0 chrX 53065258 53065303 -113584993 + MMERVK10C-int LTR ERVK 93 137 -6405 8 989 1790 70 2 2 chrX 53065306 53065740 -113584556 + MMERVK10C-int LTR ERVK 652 887 -1100 8 989 7953 48 5 7 chrX 53065733 53066756 -113583540 + MMERVK10C-int LTR ERVK 4790 5810 -1771 8 989 6467 67 2 88 chrX 53066747 53067766 -113582530 + MMERVK10C-int LTR ERVK 6651 7581 0 8 989 3450 52 31 0 chrX 53067766 53068189 -113582107 + RLTR10C LTR ERVK 1 436 0 8 989 512 366 39 0 chrX 53068382 53068535 -113581761 + B4A SINE B4 131 289 -3 8 989 198 304 95 42 chrX 53069005 53069173 -113581123 - L2 LINE L2 -1758 1661 1485 7 989 21 0 0 0 chrX 53069314 53069335 -113580961 + AT_rich Low_complexity Low_complexity 1 21 0 8 989 5801 144 3 7 chrX 53070512 53071465 -113578831 - Lx3A LINE L1 -6 6975 6027 8 989 592 291 191 5 chrX 53072742 53072955 -113577341 - B4A SINE B4 -38 254 2 8 989 369 154 87 72 chrX 53073170 53073342 -113576954 - RMER4B LTR ERVK -333 252 30 8 989 388 296 60 65 chrX 53073466 53073650 -113576646 + RMER15 LTR ERVL 244 426 -149 8 989 204 137 0 56 chrX 53073651 53073705 -113576591 + A-rich Low_complexity Low_complexity 2 52 0 9 989 243 0 0 0 chrX 53074259 53074286 -113576010 + (T)n Simple_repeat Simple_repeat 1 27 0 9 989 552 243 55 35 chrX 53074788 53074933 -113575363 + B1_Mur1 SINE Alu 2 149 0 9 989 2355 179 15 80 chrX 53075598 53076138 -113574158 + RMER15 LTR ERVL 1 505 -70 9 989 217 312 48 70 chrX 53076395 53076581 -113573715 - B2_Mm2 SINE B2 -3 192 11 9 989 632 289 18 49 chrX 53076426 53076590 -113573706 - RSINE1 SINE B4 -4 161 3 9 989 1230 177 24 8 chrX 53077344 53077595 -113572701 - Lx2 LINE L1 0 6997 6743 9 989 528 326 32 18 chrX 53078307 53078526 -113571770 + RLTR45 LTR ERVK 261 482 0 9 989 420 351 0 9 chrX 53078787 53078902 -113571394 - PB1 SINE Alu -2 125 12 9 989 220 302 0 0 chrX 53078933 53078976 -113571320 - PB1 SINE Alu -73 54 12 9 989 516 246 109 0 chrX 53079129 53079267 -113571029 + ORR1C2 LTR MaLR 230 382 -2 1 989 1849 181 22 3 chrX 53079348 53079703 -113570593 - MERVL_2A-int LTR ERVL -3505 2256 1895 1 989 5106 248 60 37 chrX 53079703 53081616 -113568680 + Lx6 LINE L1 5398 7358 -102 1 989 1028 106 0 6 chrX 53081681 53081843 -113568453 + (GGGAGA)n Simple_repeat Simple_repeat 4 164 0 1 989 324 254 36 3 chrX 53083012 53083121 -113567175 - RMER19B LTR ERVK 0 902 804 1 989 3392 188 55 37 chrX 53083124 53083997 -113566299 + RMER17D LTR ERVK 1 889 0 1 123 2253 148 43 45 chrX 53084091 53084574 -113565722 + L1VL4 LINE L1 462 943 -5359 1 990 2530 103 14 7 chrX 53084568 53085006 -113565290 + MusHAL1 LINE L1 1029 1469 -1243 1 990 4365 217 36 31 chrX 53085034 53086241 -113564055 + MYSERV6-int LTR ERVK 2491 3704 -5255 1 990 798 89 35 23 chrX 53086245 53086418 -113563878 + (TCTA)n Simple_repeat Simple_repeat 4 178 0 1 990 439 53 105 0 chrX 53086431 53086526 -113563770 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 1 990 10430 156 14 9 chrX 53086542 53086747 -113563549 + L1_Mus1 LINE L1 3332 3532 -2351 1 990 2522 134 5 17 chrX 53086747 53087157 -113563139 - RLTR9E LTR ERVK -4 405 1 1 990 10430 156 14 9 chrX 53087157 53088993 -113561303 + L1_Mus1 LINE L1 3533 5382 -501 1 990 6116 103 4 8 chrX 53088990 53089906 -113560390 + L1_Mus1 LINE L1 5652 6564 -3 1 990 209 33 33 0 chrX 53089917 53089947 -113560349 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 990 372 22 0 0 chrX 53090042 53090087 -113560209 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 990 461 271 70 21 chrX 53090166 53090309 -113559987 + B3 SINE B2 3 152 -64 1 990 232 233 0 105 chrX 53090333 53090413 -113559883 + B4A SINE B4 88 159 -65 1 990 251 364 0 29 chrX 53090401 53090503 -113559793 + B3 SINE B2 109 207 -9 1 990 291 383 0 0 chrX 53091370 53091464 -113558832 - PB1D10 SINE Alu -23 94 1 1 990 210 133 0 43 chrX 53092041 53092088 -113558208 + C-rich Low_complexity Low_complexity 6 50 0 1 990 579 173 0 0 chrX 53092088 53092198 -113558098 + (TA)n Simple_repeat Simple_repeat 2 111 0 1 990 419 120 83 0 chrX 53092842 53092950 -113557346 - L1_Mus3 LINE L1 -4 6634 6518 1 990 7902 140 20 7 chrX 53092950 53094443 -113555853 - MusHAL1 LINE L1 -958 1754 243 1 990 425 296 0 0 chrX 53094697 53094805 -113555491 + ID_B1 SINE B4 102 209 -15 1 990 341 306 49 8 chrX 53094805 53094818 -113555478 + B1F SINE Alu 21 146 -3 1 990 28 0 0 0 chrX 53095066 53095094 -113555202 + AT_rich Low_complexity Low_complexity 1 28 0 1 990 241 346 0 0 chrX 53095107 53095159 -113555137 - ID4 SINE ID -28 55 4 1 990 1286 112 21 0 chrX 53095278 53095466 -113554830 + B2_Mm2 SINE B2 1 192 -3 1 990 207 0 0 0 chrX 53095659 53095682 -113554614 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 990 500 286 130 67 chrX 53095926 53096122 -113554174 + B4A SINE B4 1 222 -70 1 990 1060 116 0 0 chrX 53096122 53096268 -113554028 + B1_Mus1 SINE Alu 2 147 -1 1 990 477 0 0 0 chrX 53096276 53096329 -113553967 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 990 500 286 130 67 chrX 53096329 53096393 -113553903 + B4A SINE B4 223 287 -5 1 990 554 180 40 37 chrX 53097689 53097835 -113552461 - B3 SINE B2 -8 187 41 1 990 331 127 73 0 chrX 53098016 53098071 -113552225 - MTE2b LTR MaLR -31 348 290 1 990 28 61 0 0 chrX 53098143 53098192 -113552104 + AT_rich Low_complexity Low_complexity 1 49 0 1 990 21 57 0 0 chrX 53098225 53098260 -113552036 + AT_rich Low_complexity Low_complexity 1 35 0 1 990 382 325 186 33 chrX 53098580 53098790 -113551506 + B4 SINE B4 50 291 -1 1 990 235 0 57 0 chrX 53098866 53098901 -113551395 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 990 1299 320 32 17 chrX 53099965 53100534 -113549762 + Lx6 LINE L1 6484 7436 -24 1 990 429 20 0 0 chrX 53100556 53100606 -113549690 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 990 238 94 0 0 chrX 53100798 53100830 -113549466 + B1_Mm SINE Alu 111 142 -5 1 990 225 0 0 0 chrX 53101310 53101335 -113548961 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 990 4345 169 45 3 chrX 53101335 53102106 -113548190 - Lx4A LINE L1 -5 7053 6250 1 990 4192 38 2 6 chrX 53102368 53102873 -113547423 - L1Md_F3 LINE L1 -1 6583 6081 1 990 31107 80 6 9 chrX 53104854 53110009 -113540287 + L1Md_A LINE L1 436 5585 -298 1 990 8006 49 0 1 chrX 53110009 53111029 -113539267 + L1Md_F3 LINE L1 5587 6584 0 1 990 22436 170 6 50 chrX 53111029 53111532 -113538764 + L1Md_A LINE L1 5578 5862 -24 1 990 4444 138 93 6 chrX 53111532 53112325 -113537971 + Lx3_Mus LINE L1 6148 7009 0 1 990 607 242 33 165 chrX 53112399 53112845 -113537451 + RLTR22_Mus LTR ERVK 493 1172 -232 1 990 609 14 0 0 chrX 53113973 53114043 -113536253 + (GA)n Simple_repeat Simple_repeat 2 71 0 1 990 329 297 8 82 chrX 53114052 53114192 -113536104 - B3A SINE B2 -27 171 41 1 990 700 175 56 0 chrX 53114198 53114324 -113535972 + B1_Mus2 SINE Alu 6 138 -9 1 990 236 376 101 0 chrX 53114397 53114506 -113535790 - PB1D7 SINE Alu 0 120 1 1 990 252 258 54 33 chrX 53114535 53114627 -113535669 - PB1D10 SINE Alu -1 116 23 1 990 606 312 25 18 chrX 53115005 53115168 -113535128 - B3A SINE B2 -33 165 2 1 990 345 302 24 65 chrX 53115568 53115692 -113534604 - RSINE1 SINE B4 -42 123 5 1 990 474 0 0 0 chrX 53115994 53116048 -113534248 - L1Md_F3 LINE L1 -521 6063 6010 1 990 4282 51 6 2 chrX 53116048 53116582 -113533714 + L1Md_F3 LINE L1 6035 6570 -14 1 990 258 167 17 0 chrX 53116601 53116661 -113533635 + Lx8 LINE L1 7413 7473 0 1 990 444 187 0 0 chrX 53116807 53116882 -113533414 + ID_B1 SINE B4 99 173 -51 1 990 5243 69 0 0 chrX 53117028 53117705 -113532591 - L1Md_T LINE L1 -1 6581 5905 1 990 352 193 0 0 chrX 53118305 53118362 -113531934 + RLTR14 LTR ERV1 3 59 -323 1 990 1370 212 4 19 chrX 53118394 53118658 -113531638 - MTC LTR MaLR 0 421 162 1 990 408 55 0 0 chrX 53118690 53118745 -113531551 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 990 444 233 132 8 chrX 53118798 53118919 -113531377 - MTC LTR MaLR -273 148 13 1 990 503 252 111 121 chrX 53118964 53119262 -113531034 + RLTR14 LTR ERV1 75 369 -13 1 990 265 175 122 24 chrX 53119234 53119316 -113530980 - B1_Mur4 SINE Alu -17 133 44 1 990 325 196 123 18 chrX 53119530 53119644 -113530652 - Lx9 LINE L1 -1 7643 7518 1 990 521 263 52 8 chrX 53120160 53120294 -113530002 - B1_Mur1 SINE Alu -8 141 2 1 990 1876 234 102 114 chrX 53120463 53121022 -113529274 + RLTR31A_Mm LTR ERVK 1 552 -5 1 990 1066 128 84 34 chrX 53121334 53121574 -113528722 - Lx3C LINE L1 -9 6967 6657 1 990 1051 102 0 0 chrX 53121663 53121810 -113528486 - B1_Mm SINE Alu 0 147 1 1 990 22 0 0 0 chrX 53122530 53122552 -113527744 + AT_rich Low_complexity Low_complexity 1 22 0 1 990 704 338 56 58 chrX 53122853 53123387 -113526909 - YREP_Mm Unknown Unknown -67 1745 1213 1 990 265 242 32 32 chrX 53123406 53123500 -113526796 + CT-rich Low_complexity Low_complexity 3 96 0 1 990 561 339 134 29 chrX 53123743 53124190 -113526106 - L2 LINE L2 -930 2489 1996 1 990 279 393 103 9 chrX 53124588 53124801 -113525495 - L2 LINE L2 -2190 1229 997 1 990 259 266 38 0 chrX 53124944 53125023 -113525273 + MIR SINE MIR 119 200 -62 1 990 303 351 32 13 chrX 53125096 53125252 -113525044 - L2 LINE L2 -2470 949 791 1 990 211 302 16 16 chrX 53125292 53125356 -113524940 + PB1D10 SINE Alu 6 69 -48 1 990 618 261 75 21 chrX 53126200 53126388 -113523908 + B3A SINE B2 1 198 0 1 990 1245 198 49 4 chrX 53126462 53126706 -113523590 - Lx9 LINE L1 -837 6807 6553 1 990 21 0 0 0 chrX 53127418 53127439 -113522857 + AT_rich Low_complexity Low_complexity 1 21 0 1 990 232 121 0 49 chrX 53127568 53127629 -113522667 + A-rich Low_complexity Low_complexity 2 59 0 1 990 237 197 0 0 chrX 53127944 53128005 -113522291 + CT-rich Low_complexity Low_complexity 2 62 0 1 990 636 343 20 5 chrX 53128699 53128898 -113521398 - ID_B1 SINE B4 -15 209 8 1 990 3468 18 5 0 chrX 53129269 53129661 -113520635 - MTA_Mm LTR MaLR -2 394 1 1 990 250 258 0 110 chrX 53130075 53130184 -113520112 + MT2B LTR ERVL 157 253 -348 1 990 442 248 25 33 chrX 53130088 53130209 -113520087 + B1_Mur3 SINE Alu 5 124 -25 1 990 368 186 0 0 chrX 53130176 53130235 -113520061 + URR1B DNA MER1_type 56 114 -111 1 990 279 0 0 0 chrX 53131254 53131285 -113519011 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 990 351 216 73 57 chrX 53132679 53132802 -113517494 + RLTR23 LTR ERV1 1 125 -305 1 990 11365 75 3 18 chrX 53132802 53134360 -113515936 + L1Md_F3 LINE L1 4051 5584 -299 1 990 7689 61 11 3 chrX 53134362 53135352 -113514944 + L1Md_F3 LINE L1 5587 6584 0 1 990 310 184 42 127 chrX 53135362 53135480 -113514816 + RLTR23 LTR ERV1 109 216 -214 1 990 1189 159 62 41 chrX 53135471 53135714 -113514582 + RLTR23 LTR ERV1 181 428 -2 1 990 3394 30 2 0 chrX 53135810 53136205 -113514091 - MTA_Mm LTR MaLR 0 396 1 1 990 405 189 0 0 chrX 53136267 53136362 -113513934 + (TG)n Simple_repeat Simple_repeat 1 95 0 1 990 396 342 34 0 chrX 53137516 53137633 -113512663 + RSINE1 SINE B4 27 147 -18 1 990 36479 34 1 1 chrX 53137700 53142890 -113507406 + L1Md_T LINE L1 437 5586 -297 1 990 8291 36 1 1 chrX 53142890 53143883 -113506413 + L1Md_T LINE L1 5587 6579 -3 1 990 957 100 42 14 chrX 53143915 53144057 -113506239 + B1_Mm SINE Alu 1 146 -1 1 990 549 0 0 0 chrX 53145490 53145551 -113504745 + (TC)n Simple_repeat Simple_repeat 1 61 0 1 990 27 0 0 0 chrX 53146371 53146398 -113503898 + AT_rich Low_complexity Low_complexity 1 27 0 1 990 573 110 10 0 chrX 53146398 53146498 -113503798 - L1_Mus1 LINE L1 -8 6559 6459 1 990 1545 93 9 0 chrX 53146502 53146717 -113503579 + L1_Mus1 LINE L1 6195 6411 -156 1 990 1975 193 40 0 chrX 53147434 53147839 -113502457 + MTC LTR MaLR 1 421 0 1 990 441 0 0 0 chrX 53148658 53148707 -113501589 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 990 529 234 70 11 chrX 53149324 53149510 -113500786 + B3 SINE B2 5 201 -15 1 990 429 285 7 62 chrX 53149510 53149656 -113500640 + B1_Mur1 SINE Alu 1 138 -11 1 990 198 0 0 0 chrX 53149657 53149679 -113500617 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 1 990 285 51 0 0 chrX 53149682 53149721 -113500575 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 990 486 33 0 0 chrX 53149769 53149829 -113500467 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 990 306 0 0 0 chrX 53149829 53149862 -113500434 + (GA)n Simple_repeat Simple_repeat 1 34 0 2 990 260 83 0 20 chrX 53150509 53150558 -113499738 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 2 990 310 262 18 55 chrX 53150863 53150972 -113499324 - RLTR14 LTR ERV1 -11 371 267 2 990 456 51 0 0 chrX 53151229 53151288 -113499008 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 990 292 314 110 49 chrX 53151420 53151714 -113498582 - RLTR20A LTR ERVK -31 328 55 2 990 1480 164 56 6 chrX 53151772 53152092 -113498204 - MYSERV6-int LTR ERVK 0 6550 6215 2 990 1757 211 110 12 chrX 53152086 53152457 -113497839 + MYSERV6-int LTR ERVK 8116 8536 -423 2 990 198 118 0 0 chrX 53152457 53152491 -113497805 + (TCTG)n Simple_repeat Simple_repeat 3 36 0 2 990 1757 211 110 12 chrX 53152491 53152618 -113497678 + MYSERV6-int LTR ERVK 8537 8663 -296 2 990 1419 120 32 20 chrX 53152620 53152867 -113497429 + L1Md_F2 LINE L1 6319 6568 -14 2 990 6530 127 14 6 chrX 53152941 53154117 -113496179 + L1_Mus3 LINE L1 5447 6633 -5 2 990 2586 247 18 19 chrX 53154118 53154860 -113495436 - MYSERV6-int LTR ERVK -259 5001 4261 2 990 684 141 6 28 chrX 53154860 53155042 -113495254 + (TA)n Simple_repeat Simple_repeat 1 178 0 2 990 702 103 73 0 chrX 53155023 53155188 -113495108 + (TAGA)n Simple_repeat Simple_repeat 4 180 0 2 990 1128 102 42 5 chrX 53155222 53155614 -113494682 + (TAGA)n Simple_repeat Simple_repeat 1 406 0 2 990 4750 216 30 30 chrX 53155618 53156834 -113493462 - MYSERV6-int LTR ERVK -5253 3706 2491 2 990 2727 126 9 2 chrX 53156862 53157315 -113492981 - MusHAL1 LINE L1 -1243 1469 1014 2 990 2973 156 38 40 chrX 53157298 53157879 -113492417 - L1VL4 LINE L1 -5364 938 359 2 990 16398 167 20 15 chrX 53158049 53160633 -113489663 - L1VL2 LINE L1 -1352 4531 1952 2 990 705 67 0 0 chrX 53160633 53160737 -113489559 + (TC)n Simple_repeat Simple_repeat 1 104 0 2 990 16398 190 34 41 chrX 53160737 53162533 -113487763 - L1VL2 LINE L1 -3932 1951 321 2 990 23 33 0 0 chrX 53162618 53162648 -113487648 + AT_rich Low_complexity Low_complexity 1 30 0 2 990 595 328 90 22 chrX 53162665 53162933 -113487363 - B4A SINE B4 -3 289 4 2 990 1087 203 19 0 chrX 53163166 53163373 -113486923 - B3 SINE B2 -5 211 1 2 990 483 312 50 0 chrX 53163518 53163659 -113486637 - B1F SINE Alu -1 148 1 2 990 1091 219 0 5 chrX 53163697 53163903 -113486393 - B3 SINE B2 -11 205 1 2 990 914 229 24 28 chrX 53164318 53164529 -113485767 - B3 SINE B2 -3 213 4 2 990 781 222 0 0 chrX 53164562 53164706 -113485590 - B1_Mur2 SINE Alu -5 144 1 2 990 4318 144 19 23 chrX 53166065 53166860 -113483436 - YREP_Mm Unknown Unknown -35 1777 986 2 990 361 302 131 59 chrX 53166864 53167100 -113483196 - L2 LINE L2 -1118 2301 2049 2 990 406 383 72 54 chrX 53167109 53167194 -113483102 + B4A SINE B4 2 82 -210 2 990 189 94 0 0 chrX 53167194 53167226 -113483070 + (CCA)n Simple_repeat Simple_repeat 1 32 0 2 990 406 383 72 54 chrX 53167226 53167416 -113482880 + B4A SINE B4 83 281 -11 2 990 274 317 35 28 chrX 53167894 53168037 -113482259 - L2 LINE L2 -1758 1661 1518 2 990 1468 168 77 136 chrX 53168839 53169294 -113481002 + RLTR23 LTR ERV1 1 428 -2 2 990 447 177 0 0 chrX 53169447 53169543 -113480753 + (TG)n Simple_repeat Simple_repeat 2 97 0 2 990 472 291 34 8 chrX 53170708 53170826 -113479470 + RSINE1 SINE B4 27 147 -18 2 990 418 32 0 16 chrX 53170892 53170956 -113479340 + L1Md_F2 LINE L1 6508 6570 -12 2 990 325 365 7 68 chrX 53170994 53171141 -113479155 - Arthur1B DNA Tip100 -780 445 308 2 990 915 98 60 0 chrX 53171184 53171317 -113478979 + B1_Mm SINE Alu 7 147 0 2 990 6794 72 24 9 chrX 53172146 53173061 -113477235 - RLTR13B3 LTR ERVK 0 929 1 2 990 537 16 0 0 chrX 53173061 53173123 -113477173 + (CCA)n Simple_repeat Simple_repeat 1 62 0 2 990 552 30 0 0 chrX 53173762 53173828 -113476468 + (TC)n Simple_repeat Simple_repeat 1 66 0 2 990 643 103 9 0 chrX 53174667 53174774 -113475522 - L1_Mus1 LINE L1 -1 6566 6459 2 990 1907 79 0 0 chrX 53174776 53175029 -113475267 + L1_Mus1 LINE L1 6183 6435 -132 2 990 235 235 73 0 chrX 53175037 53175105 -113475191 - LTR40c LTR ERVL -54 411 339 2 990 252 296 0 14 chrX 53175993 53176065 -113474231 + PB1D7 SINE Alu 22 92 -28 2 990 403 297 108 8 chrX 53176146 53176275 -113474021 - B1_Mur1 SINE Alu -2 147 6 2 990 237 83 0 0 chrX 53176509 53176545 -113473751 + (A)n Simple_repeat Simple_repeat 1 36 0 2 990 37 23 0 0 chrX 53176579 53176623 -113473673 + AT_rich Low_complexity Low_complexity 1 44 0 2 990 270 136 0 0 chrX 53176652 53176696 -113473600 + (CCA)n Simple_repeat Simple_repeat 3 46 0 2 990 1993 195 40 0 chrX 53177471 53177876 -113472420 + MTC LTR MaLR 1 421 0 2 990 408 20 0 0 chrX 53178716 53178765 -113471531 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 990 634 246 61 15 chrX 53179384 53179571 -113470725 + B3 SINE B2 5 201 -15 2 990 457 272 13 58 chrX 53179571 53179727 -113470569 + B1_Mur1 SINE Alu 1 149 0 2 990 576 0 0 0 chrX 53179855 53179919 -113470377 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 990 507 17 0 0 chrX 53180672 53180732 -113469564 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 990 271 270 48 48 chrX 53180915 53181020 -113469276 - RLTR14 LTR ERV1 -11 371 267 2 990 711 33 0 0 chrX 53181252 53181342 -113468954 + (CA)n Simple_repeat Simple_repeat 1 90 0 2 990 311 306 118 44 chrX 53181473 53181743 -113468553 - RLTR15 LTR ERVK -22 337 48 2 990 2309 188 71 41 chrX 53181831 53182256 -113468040 - MYSERV6-int LTR ERVK -2 8957 8537 2 990 180 77 0 0 chrX 53182256 53182282 -113468014 + (CAGA)n Simple_repeat Simple_repeat 3 28 0 2 990 2309 188 71 41 chrX 53182282 53182460 -113467836 - MYSERV6-int LTR ERVK -423 8536 8337 2 990 28859 95 15 57 chrX 53182559 53183936 -113466360 - L1Md_F2 LINE L1 0 6582 5193 2 990 2683 49 0 0 chrX 53183936 53184262 -113466034 - IAPEY2_LTR LTR ERVK 0 357 32 2 990 28859 95 15 57 chrX 53184262 53188913 -113461383 - L1Md_F2 LINE L1 0 5192 497 2 990 1940 200 26 16 chrX 53188914 53189435 -113460861 - MYSERV-int LTR ERVK -694 5856 5379 2 990 406 282 25 82 chrX 53189454 53189653 -113460643 - RMER4A LTR ERVK -33 552 255 2 990 976 267 53 0 chrX 53189655 53189917 -113460379 - MYSERV-int LTR ERVK -1418 5132 4857 2 990 682 273 25 29 chrX 53189917 53190155 -113460141 - Lx4B LINE L1 -2 7056 6820 2 990 1206 266 43 43 chrX 53190158 53190641 -113459655 - MYSERV-int LTR ERVK -1691 4859 4377 2 990 417 122 0 0 chrX 53190720 53190794 -113459502 + (CA)n Simple_repeat Simple_repeat 2 75 0 2 990 705 253 60 24 chrX 53190794 53191045 -113459251 - RLTR20A LTR ERVK -134 407 148 2 990 1035 126 47 5 chrX 53191045 53191236 -113459060 - L1_Mus3 LINE L1 -4 6634 6436 2 990 518 224 22 36 chrX 53191371 53191510 -113458786 - RLTR20A LTR ERVK -396 164 28 2 990 6078 149 5 5 chrX 53191683 53193282 -113457014 + L1_Mus4 LINE L1 5032 6631 -5 2 990 2406 253 14 18 chrX 53193285 53194017 -113456279 - MurERV4-int LTR ERVK -261 4999 4271 2 990 224 197 30 0 chrX 53194020 53194086 -113456210 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 2 990 1090 74 16 24 chrX 53194102 53194353 -113455943 + (TAGA)n Simple_repeat Simple_repeat 1 249 0 2 990 2305 219 40 12 chrX 53194355 53194961 -113455335 - MurERV4-int LTR ERVK -5253 3706 3084 2 990 229 294 8 70 chrX 53195316 53195444 -113454852 + PB1 SINE Alu 1 120 -7 2 990 300 211 142 68 chrX 53195715 53195822 -113454474 - PB1D9 SINE Alu -2 118 1 2 990 424 329 191 3 chrX 53195822 53196121 -113454175 + L2 LINE L2 1949 2303 -1116 2 990 229 333 76 36 chrX 53196125 53196349 -113453947 + YREP_Mm Unknown Unknown 988 1220 -592 2 990 218 170 0 70 chrX 53196586 53196643 -113453653 + GA-rich Low_complexity Low_complexity 4 56 0 2 990 518 127 0 19 chrX 53196664 53196768 -113453528 + (GGGA)n Simple_repeat Simple_repeat 3 104 0 2 990 3487 18 2 0 chrX 53196971 53197366 -113452930 - MTA_Mm LTR MaLR 0 396 1 2 990 365 383 17 17 chrX 53197540 53197774 -113452522 + YREP_Mm Unknown Unknown 1544 1777 -35 2 990 440 213 11 0 chrX 53197977 53198071 -113452225 - BC1_Mm scRNA scRNA -57 95 1 2 990 774 241 0 12 chrX 53198163 53198331 -113451965 - B2_Mm2 SINE B2 -28 167 2 2 990 26 64 0 0 chrX 53198534 53198581 -113451715 + AT_rich Low_complexity Low_complexity 1 47 0 2 990 2745 105 32 2 chrX 53198812 53199222 -113451074 + L1_Mus2 LINE L1 6145 6566 0 2 990 334 303 0 0 chrX 53199859 53199948 -113450348 + PB1D10 SINE Alu 27 115 -2 2 990 1374 156 39 16 chrX 53200091 53200398 -113449898 - MusHAL1 LINE L1 -1789 923 610 2 990 399 265 15 22 chrX 53201200 53201335 -113448961 + MurSatRep1 Unknown Unknown 627 760 -1377 2 990 752 209 91 41 chrX 53201438 53201657 -113448639 + Lx7 LINE L1 7032 7261 -435 2 990 508 344 0 49 chrX 53202005 53202167 -113448129 - RSINE1 SINE B4 0 165 12 2 990 1349 221 44 98 chrX 53202288 53202859 -113447437 + Lx7 LINE L1 7157 7696 0 2 990 241 355 77 12 chrX 53203104 53203272 -113447024 - MLT1G LTR MaLR -321 234 56 2 990 1399 127 5 17 chrX 53203189 53203427 -113446869 - CYRA11_Mm Unknown Y-chromosome 0 617 172 2 990 659 233 67 19 chrX 53203427 53203637 -113446659 + URR1A DNA MER1_type 5 224 -2 2 990 525 234 58 40 chrX 53203637 53203734 -113446562 - CYRA11_Mm Unknown Y-chromosome -446 171 77 2 990 1590 129 4 11 chrX 53203798 53204072 -113446224 - L1_Mus4 LINE L1 -3 6633 6362 2 990 588 190 0 34 chrX 53204068 53204215 -113446081 - Lx LINE L1 -5 6649 6508 2 990 277 191 10 50 chrX 53204647 53204746 -113445550 - Lx2 LINE L1 0 6997 6903 2 990 540 279 114 30 chrX 53204754 53204920 -113445376 - MTB_Mm LTR MaLR -60 347 168 2 990 903 254 10 0 chrX 53204976 53205173 -113445123 - B3 SINE B2 -17 199 1 2 990 447 273 0 26 chrX 53205176 53205289 -113445007 - MTB_Mm LTR MaLR -210 211 102 2 990 296 273 69 60 chrX 53205289 53205507 -113444789 + Lx7 LINE L1 5848 6067 -1629 2 990 998 251 33 42 chrX 53205514 53205847 -113444449 + Lx7 LINE L1 6690 7019 -677 2 990 400 173 0 0 chrX 53205863 53205938 -113444358 - Lx2 LINE L1 -1059 5938 5864 2 990 550 62 0 0 chrX 53205936 53206016 -113444280 - MusHAL1 LINE L1 -1271 1441 1362 2 990 375 242 21 10 chrX 53206117 53206213 -113444083 - MTC LTR MaLR -324 97 1 2 990 315 243 40 0 chrX 53207862 53207936 -113442360 + ID2 SINE ID 4 80 -3 2 990 218 286 0 20 chrX 53207964 53208014 -113442282 + ID SINE ID 2 50 -174 2 990 258 32 0 0 chrX 53209292 53209323 -113440973 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 990 759 80 0 0 chrX 53210059 53210171 -113440125 + (TG)n Simple_repeat Simple_repeat 2 113 0 2 990 285 135 0 0 chrX 53210185 53210237 -113440059 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 990 268 273 22 11 chrX 53211501 53211590 -113438706 - MER33 DNA MER1_type -229 95 6 2 990 252 200 32 32 chrX 53213384 53213446 -113436850 + MER3 DNA MER1_type 46 107 -102 3 990 1112 95 0 0 chrX 53213609 53213756 -113436540 + B1_Mus1 SINE Alu 2 148 0 3 990 736 247 10 65 chrX 53213755 53213954 -113436342 + B3 SINE B2 27 214 -2 3 990 214 319 0 0 chrX 53214663 53214732 -113435564 + CT-rich Low_complexity Low_complexity 1 69 0 3 991 23 33 0 0 chrX 53215268 53215298 -113434998 + AT_rich Low_complexity Low_complexity 1 30 0 3 991 443 18 18 0 chrX 53215541 53215597 -113434699 + (TTA)n Simple_repeat Simple_repeat 1 57 0 3 991 558 239 0 0 chrX 53216862 53216971 -113433325 + B1_Mur1 SINE Alu 26 134 -15 3 991 468 208 0 0 chrX 53217352 53217453 -113432843 + (CATATA)n Simple_repeat Simple_repeat 2 102 0 3 991 224 153 40 40 chrX 53217454 53217529 -113432767 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 3 991 541 177 14 0 chrX 53217540 53217687 -113432609 + (TG)n Simple_repeat Simple_repeat 1 149 0 3 991 2721 30 0 23 chrX 53217687 53218033 -113432263 + ORR1A0 LTR MaLR 1 338 -8 3 991 13429 54 4 20 chrX 53218037 53218298 -113431998 + ORR1A0-int LTR MaLR 1 238 -1554 3 991 4199 55 21 0 chrX 53218298 53218828 -113431468 + L1Md_F2 LINE L1 6042 6582 0 3 991 13429 54 4 20 chrX 53218828 53220387 -113429909 + ORR1A0-int LTR MaLR 239 1792 0 3 991 2829 21 0 12 chrX 53220387 53220729 -113429567 + ORR1A0 LTR MaLR 1 338 -8 3 991 854 264 109 25 chrX 53220739 53221224 -113429072 + L1M2 LINE L1 3513 4038 -2105 3 991 288 143 20 107 chrX 53221225 53221374 -113428922 + (TATAA)n Simple_repeat Simple_repeat 5 140 0 3 991 245 184 7 99 chrX 53221416 53221567 -113428729 + (TATAA)n Simple_repeat Simple_repeat 1 137 0 3 991 213 232 52 26 chrX 53221527 53221682 -113428614 + (TA)n Simple_repeat Simple_repeat 1 159 0 3 991 257 191 60 30 chrX 53221616 53221783 -113428513 + (TTATA)n Simple_repeat Simple_repeat 5 176 0 3 991 257 123 23 116 chrX 53221824 53221953 -113428343 + (TATAA)n Simple_repeat Simple_repeat 1 117 0 3 991 683 310 38 3 chrX 53221970 53222310 -113427986 + L1M2 LINE L1 3991 4342 -1798 3 991 23 54 0 0 chrX 53222310 53222347 -113427949 + AT_rich Low_complexity Low_complexity 1 37 0 3 991 428 299 8 25 chrX 53222413 53222533 -113427763 + B1F SINE Alu 1 118 -31 3 991 780 286 49 47 chrX 53222533 53222862 -113427434 + L1M2 LINE L1 4397 4745 -1398 3 991 999 135 0 0 chrX 53222862 53223003 -113427293 + B1_Mus1 SINE Alu 2 142 -6 3 991 780 286 49 47 chrX 53223003 53223062 -113427234 + L1M2 LINE L1 4746 4793 -1350 3 991 288 0 0 0 chrX 53223062 53223094 -113427202 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 991 780 286 49 47 chrX 53223094 53223217 -113427079 + L1M2 LINE L1 4794 4910 -1233 3 991 320 254 66 12 chrX 53223233 53223244 -113427052 + PB1D10 SINE Alu 15 49 -68 3 991 343 224 0 15 chrX 53223244 53223312 -113426984 + ID_B1 SINE B4 107 173 -51 3 991 320 254 66 12 chrX 53223312 53223330 -113426966 + PB1D10 SINE Alu 50 116 -1 3 991 474 261 34 20 chrX 53223366 53223559 -113426737 + L1_Rod LINE L1 4847 5071 -809 3 991 264 263 10 48 chrX 53223672 53223776 -113426520 + L1M2 LINE L1 5123 5222 -921 3 991 426 250 93 0 chrX 53223892 53224088 -113426208 + L1_Mur3 LINE L1 5329 5541 -633 3 991 806 177 7 0 chrX 53224106 53224247 -113426049 + B1_Mur4 SINE Alu 3 144 -6 3 991 569 183 189 54 chrX 53224530 53224715 -113425581 + RMER1C Other Other 1132 1341 -1 3 991 189 0 0 0 chrX 53225262 53225283 -113425013 + (CACTC)n Simple_repeat Simple_repeat 3 23 0 3 991 3653 138 5 8 chrX 53226896 53227515 -113422781 - CYRA11_Mm Unknown Y-chromosome 0 617 1 3 991 231 325 158 47 chrX 53227383 53227554 -113422742 - MLT1D LTR MaLR -261 244 55 3 991 858 139 73 0 chrX 53227615 53227752 -113422544 - B1_Mus2 SINE Alu 0 147 1 3 991 1752 112 0 4 chrX 53227802 53228070 -113422226 - L1_Mus4 LINE L1 -3 6633 6367 3 991 754 148 0 27 chrX 53228071 53228217 -113422079 - Lx LINE L1 -5 6649 6508 3 991 28007 33 1 0 chrX 53228648 53232878 -113417418 - L1Md_T LINE L1 -2 6580 2348 3 991 14662 5 0 0 chrX 53232896 53235315 -113414981 - L1Md_A LINE L1 0 6582 4163 3 991 8394 35 6 21 chrX 53235314 53237189 -113413107 - L1Md_T LINE L1 -3603 2280 440 3 991 314 212 10 29 chrX 53237199 53237301 -113412995 - Lx2 LINE L1 0 6997 6898 3 991 541 263 96 26 chrX 53237306 53237462 -113412834 - MTD LTR MaLR -60 359 193 3 991 894 257 9 49 chrX 53237479 53237508 -113412788 - B3 SINE B2 0 216 195 3 991 513 47 0 0 chrX 53237508 53237572 -113412724 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 991 894 257 9 49 chrX 53237572 53237767 -113412529 - B3 SINE B2 -22 194 1 3 991 421 318 0 0 chrX 53237770 53237880 -113412416 - MTD LTR MaLR -208 211 102 3 991 301 304 37 32 chrX 53237880 53238067 -113412229 + Lx7 LINE L1 5848 6035 -1661 3 991 934 273 24 30 chrX 53238105 53238437 -113411859 + Lx7 LINE L1 6690 7019 -677 3 991 456 147 0 0 chrX 53238453 53238528 -113411768 - Lx2 LINE L1 -1059 5938 5864 3 991 531 102 23 0 chrX 53238518 53238606 -113411690 - L1_Mur1 LINE L1 -3228 2658 2569 3 991 500 234 23 8 chrX 53238672 53238801 -113411495 - MTD LTR MaLR -290 131 1 3 991 603 60 0 0 chrX 53240614 53240698 -113409598 + (CA)n Simple_repeat Simple_repeat 1 84 0 3 991 513 0 0 0 chrX 53240698 53240754 -113409542 + (GA)n Simple_repeat Simple_repeat 2 58 0 3 991 518 217 43 9 chrX 53240759 53240875 -113409421 + RMER1C Other Other 1004 1123 -219 3 991 978 153 121 0 chrX 53240875 53241065 -113409231 - RMER4A LTR ERVK 0 466 254 3 991 235 247 65 0 chrX 53241752 53241829 -113408467 - RMER4A LTR ERVK -319 266 185 3 991 2679 81 0 0 chrX 53241882 53242228 -113408068 + ORR1A1 LTR MaLR 1 346 0 3 991 286 281 0 58 chrX 53242229 53242350 -113407946 + (TCTCTG)n Simple_repeat Simple_repeat 1 114 0 3 991 1471 160 27 60 chrX 53242645 53242978 -113407318 - RLTRETN_Mm LTR ERVK 0 322 1 3 991 18189 179 30 36 chrX 53242982 53247393 -113402903 - ETnERV2-int LTR ERVK -107 7299 2375 3 991 884 323 44 28 chrX 53247439 53247936 -113402360 - ETnERV2-int LTR ERVK -3873 2294 1790 3 991 12034 81 4 7 chrX 53248169 53249833 -113400463 - ETnERV2-int LTR ERVK -1654 1660 2 3 991 1474 145 36 69 chrX 53249834 53250167 -113400129 - RLTRETN_Mm LTR ERVK 0 322 1 3 991 525 274 46 40 chrX 53250187 53250362 -113399934 - MTD LTR MaLR -24 395 220 3 991 389 285 42 70 chrX 53250542 53250757 -113399539 - B3 SINE B2 -7 209 1 3 991 267 274 18 124 chrX 53251277 53251363 -113398933 + B3 SINE B2 5 85 -131 3 991 995 59 7 0 chrX 53251363 53251498 -113398798 + (TC)n Simple_repeat Simple_repeat 1 136 0 3 991 267 274 18 124 chrX 53251498 53251628 -113398668 + B3 SINE B2 86 198 -18 3 991 28 61 0 0 chrX 53251809 53251858 -113398438 + AT_rich Low_complexity Low_complexity 1 49 0 3 991 233 327 29 10 chrX 53251925 53252027 -113398269 + Charlie1a DNA MER1_type 629 732 -723 3 991 25739 26 0 0 chrX 53252027 53255902 -113394394 - L1Md_T LINE L1 -2 6580 2707 3 991 6792 76 0 0 chrX 53255899 53256869 -113393427 + L1Md_T LINE L1 1737 2706 -3177 3 991 288 312 68 37 chrX 53258125 53258288 -113392008 - B3 SINE B2 -44 172 5 3 991 483 314 47 38 chrX 53258636 53258848 -113391448 - B3 SINE B2 -1 215 2 3 991 216 303 18 0 chrX 53258969 53258984 -113391312 + (TCTCTG)n Simple_repeat Simple_repeat 6 20 0 3 991 276 30 0 0 chrX 53258984 53259017 -113391279 + (CCCCCT)n Simple_repeat Simple_repeat 6 38 0 3 991 216 303 18 0 chrX 53259017 53259110 -113391186 + (TCTCTG)n Simple_repeat Simple_repeat 1 95 0 3 991 221 0 0 33 chrX 53259164 53259194 -113391102 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 991 292 307 34 34 chrX 53259213 53259331 -113390965 - B1_Mur1 SINE Alu -31 118 1 3 991 525 262 7 14 chrX 53259404 53259547 -113390749 + B1_Mus1 SINE Alu 2 143 -5 3 991 2391 146 43 6 chrX 53259590 53260074 -113390222 + MusHAL1 LINE L1 2137 2638 -74 3 991 405 0 0 0 chrX 53260193 53260238 -113390058 + (TAA)n Simple_repeat Simple_repeat 1 45 0 3 991 539 297 10 49 chrX 53260820 53261009 -113389287 - MTD LTR MaLR -24 395 232 3 991 1797 259 97 27 chrX 53261009 53261590 -113388706 + RLTR1 LTR ERV1 1 624 0 3 991 25719 268 30 28 chrX 53261607 53269131 -113381165 + MMERGLN-int LTR ERV1 18 7556 0 3 991 1699 273 97 24 chrX 53269131 53269711 -113380585 + RLTR1 LTR ERV1 1 624 0 3 991 599 288 19 24 chrX 53269898 53270108 -113380188 - B3 SINE B2 -7 209 1 3 991 202 286 54 54 chrX 53271713 53271824 -113378472 - MIR SINE MIR -89 173 63 3 991 2646 201 40 30 chrX 53272453 53273430 -113376866 + L1VL4 LINE L1 899 1899 -3978 3 991 879 145 215 0 chrX 53273493 53273693 -113376603 + Lx2A LINE L1 6725 6967 -41 3 991 513 241 56 22 chrX 53273743 53273921 -113376375 + Lx4B LINE L1 6866 7049 -9 3 991 185 83 28 0 chrX 53275873 53275909 -113374387 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 3 991 26 0 0 0 chrX 53275973 53275999 -113374297 + AT_rich Low_complexity Low_complexity 1 26 0 3 991 10337 117 104 5 chrX 53276365 53279180 -113371116 - L1Md_F2 LINE L1 -13 6569 3101 3 991 7594 121 32 11 chrX 53279176 53281301 -113368995 - L1Md_F2 LINE L1 -3561 2322 152 3 991 946 180 6 0 chrX 53281304 53281482 -113368814 + RLTR12A LTR ERVK 4 182 -386 3 991 342 0 0 0 chrX 53281484 53281522 -113368774 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 991 270 0 0 0 chrX 53281522 53281551 -113368745 + (GA)n Simple_repeat Simple_repeat 2 31 0 3 991 500 300 35 48 chrX 53281552 53281783 -113368513 + RLTR12A LTR ERVK 341 568 0 3 991 6716 155 23 3 chrX 53282039 53283909 -113366387 + Lx LINE L1 4759 6654 0 3 991 237 304 56 35 chrX 53283932 53284075 -113366221 - MER53 DNA hAT -31 162 17 3 991 385 181 201 10 chrX 53284076 53284240 -113366056 - L1_Mur2 LINE L1 -5625 677 492 3 991 688 307 35 81 chrX 53284887 53285284 -113365012 - MTE2a LTR MaLR 0 379 1 3 991 264 30 0 0 chrX 53285338 53285371 -113364925 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 991 206 204 18 18 chrX 53285409 53285464 -113364832 + (TATG)n Simple_repeat Simple_repeat 1 55 0 3 991 388 340 14 69 chrX 53285483 53285745 -113364551 - B4A SINE B4 -1 291 9 3 991 32 26 0 0 chrX 53286274 53286313 -113363983 + AT_rich Low_complexity Low_complexity 1 39 0 3 991 1191 93 49 16 chrX 53286413 53286598 -113363698 - B2_Mm1t SINE B2 0 193 3 3 991 1136 343 58 20 chrX 53286630 53287219 -113363077 + Lx8 LINE L1 6638 7248 -225 3 991 555 344 60 50 chrX 53287374 53287754 -113362542 + Lx8 LINE L1 6218 6601 -872 3 991 1999 222 12 62 chrX 53287873 53288455 -113361841 + RLTR31_Mur LTR ERVK 1 553 0 3 991 269 381 89 48 chrX 53288619 53288765 -113361531 + RSINE1 SINE B4 12 163 -2 3 991 25 0 0 0 chrX 53290319 53290344 -113359952 + AT_rich Low_complexity Low_complexity 1 25 0 3 991 21 36 0 0 chrX 53290894 53290922 -113359374 + AT_rich Low_complexity Low_complexity 1 28 0 3 991 25 0 0 0 chrX 53291234 53291259 -113359037 + AT_rich Low_complexity Low_complexity 1 25 0 3 991 193 109 0 42 chrX 53292043 53292091 -113358205 + A-rich Low_complexity Low_complexity 3 48 0 3 991 24 53 0 0 chrX 53292179 53292217 -113358079 + AT_rich Low_complexity Low_complexity 1 38 0 3 991 469 153 0 56 chrX 53292586 53292676 -113357620 - L1_Mm LINE L1 -721 5162 5078 3 991 38650 54 5 9 chrX 53292676 53298855 -113351441 - L1Md_A LINE L1 -282 6300 139 3 991 334 306 20 7 chrX 53298874 53299022 -113351274 - RLTR45-int LTR ERVK -6914 330 181 3 991 702 186 8 0 chrX 53299514 53299632 -113350664 - ETnERV2-int LTR ERVK -218 7188 7070 4 991 3457 203 16 13 chrX 53299805 53300515 -113349781 - Lx3C LINE L1 -214 6762 6051 4 991 1102 204 31 0 chrX 53300512 53300738 -113349558 - Lx9 LINE L1 -491 7153 6921 4 991 1313 143 62 9 chrX 53300738 53300963 -113349333 + Lx4A LINE L1 6805 7041 -17 4 991 564 276 236 0 chrX 53301013 53301187 -113349109 + B3 SINE B2 2 216 0 4 991 536 305 27 49 chrX 53301222 53301405 -113348891 + ID_B1 SINE B4 6 184 -40 4 991 470 222 73 46 chrX 53301650 53301801 -113348495 - Lx9 LINE L1 -709 6935 6781 4 991 723 214 65 0 chrX 53301802 53301956 -113348340 + Lx9 LINE L1 7302 7465 -179 4 991 414 182 49 8 chrX 53301973 53302095 -113348201 + Lx9 LINE L1 7517 7643 -1 4 991 798 64 0 0 chrX 53303080 53303189 -113347107 + (TA)n Simple_repeat Simple_repeat 1 109 0 4 991 5178 127 9 16 chrX 53303299 53304740 -113345556 + L1Md_A LINE L1 372 1800 -4083 4 991 2113 82 3 0 chrX 53304743 53305035 -113345261 + L1Md_A LINE L1 4055 4347 -1536 4 991 7073 56 1 3 chrX 53305035 53305934 -113344362 + L1Md_F3 LINE L1 5671 6567 -17 4 991 198 0 0 0 chrX 53305942 53305964 -113344332 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 991 414 355 90 16 chrX 53305991 53306180 -113344116 + B3 SINE B2 9 211 -5 4 991 489 333 28 85 chrX 53306269 53306446 -113343850 + B3A SINE B2 1 167 -31 4 991 612 149 43 9 chrX 53306558 53306673 -113343623 + PB1D9 SINE Alu 2 120 0 4 991 338 61 0 20 chrX 53306677 53306727 -113343569 + (GAAAA)n Simple_repeat Simple_repeat 2 50 0 4 991 625 288 0 0 chrX 53307095 53307234 -113343062 - B1_Mur2 SINE Alu -8 141 3 4 991 3837 221 78 6 chrX 53307370 53308188 -113342108 - Lx5 LINE L1 0 7050 6174 4 991 427 176 21 7 chrX 53308189 53308285 -113342011 - L1_Mur2 LINE L1 -516 5817 5724 4 991 1050 311 18 6 chrX 53308421 53308754 -113341542 - Lx8 LINE L1 -266 7207 6871 4 991 29 28 0 0 chrX 53308770 53308806 -113341490 + AT_rich Low_complexity Low_complexity 1 36 0 4 991 27 29 0 0 chrX 53309252 53309286 -113341010 + AT_rich Low_complexity Low_complexity 1 34 0 4 991 801 208 95 4 chrX 53309288 53309529 -113340767 + Lx9 LINE L1 7372 7634 -10 4 991 244 256 107 15 chrX 53310851 53310982 -113339314 - L1M4 LINE L1 -3734 2412 2270 4 991 8906 130 6 1 chrX 53311118 53312549 -113337747 - L1VL4 LINE L1 -730 5153 3717 4 991 2156 147 0 0 chrX 53312543 53312917 -113337379 - L1VL4 LINE L1 -3773 2110 1737 4 991 2708 153 0 5 chrX 53312920 53313774 -113336522 - L1VL4 LINE L1 -2334 1580 725 4 991 358 281 0 0 chrX 53313778 53313874 -113336422 - L1VL4 LINE L1 -5809 807 712 4 991 2269 128 3 75 chrX 53313874 53314261 -113336035 - RLTR10D LTR ERVK 0 359 1 4 991 3226 82 0 2 chrX 53314261 53314677 -113335619 - IAP-d-int LTR ERVK 0 6542 6128 4 991 21473 64 16 19 chrX 53314680 53317523 -113332773 - IAP-d-int LTR ERVK -521 6021 3188 4 991 5539 66 31 3 chrX 53317590 53318309 -113331987 - IAP-d-int LTR ERVK -5803 739 1 4 991 2374 117 3 75 chrX 53318309 53318696 -113331600 - RLTR10D LTR ERVK 0 359 1 4 991 912 255 16 148 chrX 53318749 53319208 -113331088 - L1VL1 LINE L1 -6027 395 4 4 991 1665 219 33 8 chrX 53321099 53321459 -113328837 - ORR1D1 LTR MaLR 0 374 6 4 991 234 0 0 0 chrX 53321611 53321637 -113328659 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 991 555 16 0 0 chrX 53321639 53321703 -113328593 + (GA)n Simple_repeat Simple_repeat 2 65 0 4 991 1111 282 3 3 chrX 53322675 53322967 -113327329 - L3b LINE CR1 -189 293 2 4 991 504 0 0 0 chrX 53322983 53323039 -113327257 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 991 555 327 25 6 chrX 53323411 53323571 -113326725 + RSINE1 SINE B4 3 165 0 4 991 4032 15 51 0 chrX 53323605 53324074 -113326222 + MT2_Mm LTR ERVL 1 493 0 4 991 1924 27 0 0 chrX 53324074 53324297 -113325999 + MERVL-int LTR ERVL 1 223 -5262 4 991 33854 23 13 0 chrX 53324288 53328175 -113322121 + MERVL-int LTR ERVL 1433 5371 -114 4 991 356 125 26 53 chrX 53328175 53328251 -113322045 + ORR1A3-int LTR MaLR 567 640 -1323 4 991 298 26 0 0 chrX 53328251 53328289 -113322007 + MERVL-int LTR ERVL 5448 5485 0 4 991 1238 36 8 5 chrX 53328289 53328531 -113321765 + MT2_Mm LTR ERVL 1 204 -380 4 991 265 224 13 13 chrX 53328553 53328630 -113321666 + Lx5 LINE L1 5798 5874 -1176 4 991 333 89 0 0 chrX 53328658 53328703 -113321593 + Lx7 LINE L1 4175 4219 -1667 4 991 318 93 19 0 chrX 53328714 53328768 -113321528 - B1_Mm SINE Alu 0 147 93 4 991 10928 151 42 22 chrX 53328768 53330945 -113319351 + Lx7 LINE L1 4218 6429 -1044 4 991 406 297 144 32 chrX 53330945 53331133 -113319163 + Lx7 LINE L1 7150 7358 -115 4 991 495 301 49 25 chrX 53331306 53331683 -113318613 - L1_Mur3 LINE L1 -1197 4946 4562 4 991 2226 157 26 80 chrX 53331716 53332674 -113317622 + L1Md_F LINE L1 628 1527 -2290 4 991 2880 62 3 0 chrX 53332667 53333041 -113317255 - L1_Mm LINE L1 -1092 4791 4417 4 991 2256 96 4 6 chrX 53333036 53333386 -113316910 + L1_Mm LINE L1 4781 5160 -986 4 991 2655 323 50 27 chrX 53333400 53334747 -113315549 + RMER15-int LTR ERVL 724 2102 -2897 4 991 36913 5 1 0 chrX 53334792 53340371 -113309925 + L1Md_A LINE L1 6 5586 -297 4 991 9051 3 0 0 chrX 53340371 53341367 -113308929 + L1Md_A LINE L1 5587 6582 0 4 991 1891 243 59 15 chrX 53342104 53342647 -113307649 - Lx7 LINE L1 -1241 6455 5889 4 991 698 244 161 0 chrX 53342657 53342850 -113307446 + URR1B DNA MER1_type 2 225 0 4 991 5255 183 102 59 chrX 53342852 53344036 -113306260 - Lx7 LINE L1 -1807 5889 4630 4 991 333 0 0 0 chrX 53344036 53344073 -113306223 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 991 5255 183 104 60 chrX 53344073 53344477 -113305819 - Lx7 LINE L1 -1251 4629 4240 4 991 293 342 63 29 chrX 53344833 53345182 -113305114 - L1_Mur3 LINE L1 -6899 813 453 4 991 201 74 17 85 chrX 53345310 53345369 -113304927 + T-rich Low_complexity Low_complexity 1 55 0 4 992 21 0 0 0 chrX 53346607 53346628 -113303668 + AT_rich Low_complexity Low_complexity 1 21 0 4 992 216 356 27 0 chrX 53347077 53347150 -113303146 - PB1D10 SINE Alu -20 97 23 4 992 6821 92 3 3 chrX 53348963 53350319 -113299977 - L1_Mus2 LINE L1 -3 6563 5207 4 992 441 0 0 0 chrX 53350882 53350931 -113299365 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 992 22 0 0 0 chrX 53350970 53350992 -113299304 + AT_rich Low_complexity Low_complexity 1 22 0 4 992 627 71 0 0 chrX 53351311 53351396 -113298900 + (CA)n Simple_repeat Simple_repeat 2 86 0 4 992 7138 156 57 14 chrX 53351425 53353134 -113297162 + Lx4B LINE L1 5269 7045 -13 4 992 459 0 0 0 chrX 53353612 53353663 -113296633 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 992 742 276 109 41 chrX 53354120 53354511 -113295785 + MT2B LTR ERVL 56 562 -39 4 992 266 216 14 0 chrX 53354519 53354593 -113295703 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 4 992 539 62 12 0 chrX 53354614 53354694 -113295602 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 4 992 366 42 0 0 chrX 53354695 53354743 -113295553 + (TGAG)n Simple_repeat Simple_repeat 1 48 0 4 992 351 0 0 0 chrX 53355298 53355337 -113294959 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 992 26 0 0 0 chrX 53356190 53356216 -113294080 + AT_rich Low_complexity Low_complexity 1 26 0 4 992 207 69 0 0 chrX 53356216 53356245 -113294051 + (CAA)n Simple_repeat Simple_repeat 2 30 0 4 992 24 0 0 0 chrX 53356644 53356668 -113293628 + AT_rich Low_complexity Low_complexity 1 24 0 4 992 514 360 0 19 chrX 53357244 53357400 -113292896 - RSINE1 SINE B4 -2 163 11 4 992 1933 225 49 93 chrX 53357604 53358300 -113291996 + Lx7 LINE L1 7032 7696 0 4 992 3657 128 13 8 chrX 53358617 53359231 -113291065 - CYRA11_Mm Unknown Y-chromosome 0 617 1 4 992 1006 110 7 14 chrX 53359346 53359494 -113290802 - B1_Mus2 SINE Alu 0 147 1 4 992 1620 105 32 0 chrX 53359538 53359821 -113290475 - L1_Mus4 LINE L1 0 6636 6367 4 992 707 147 0 47 chrX 53359822 53359972 -113290324 - Lx LINE L1 -3 6651 6509 4 992 4148 110 0 0 chrX 53360355 53360993 -113289303 + L1_Mm LINE L1 4911 5548 -335 4 992 1546 42 0 0 chrX 53360993 53361186 -113289110 + L1Md_A LINE L1 6389 6581 -1 4 992 5132 59 1 3 chrX 53361184 53361835 -113288461 + L1Md_F2 LINE L1 5933 6582 0 4 992 354 121 0 0 chrX 53362265 53362331 -113287965 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 992 1812 81 121 4 chrX 53362473 53362745 -113287551 - L1_Mus1 LINE L1 -1 6566 6263 4 992 419 8 0 135 chrX 53362749 53362890 -113287406 + (CCCTAG)n Simple_repeat Simple_repeat 2 123 0 4 992 1604 115 4 4 chrX 53362891 53363144 -113287152 - L1Md_F2 LINE L1 -284 6298 6046 4 992 252 86 0 0 chrX 53363182 53363217 -113287079 + (T)n Simple_repeat Simple_repeat 1 35 0 4 992 11530 124 12 20 chrX 53363668 53366431 -113283865 - L1_Mus3 LINE L1 -1 6637 3901 4 992 1272 61 0 0 chrX 53366430 53366593 -113283703 + L1Md_F2 LINE L1 5424 5586 -297 4 992 7588 70 1 4 chrX 53366594 53367589 -113282707 + L1Md_F2 LINE L1 5588 6579 -3 4 992 6680 97 3 6 chrX 53367590 53368712 -113281584 + L1_Mus1 LINE L1 5450 6567 0 4 992 246 95 0 0 chrX 53368733 53368775 -113281521 + (CAAAA)n Simple_repeat Simple_repeat 1 42 0 4 992 8388 50 1 20 chrX 53368776 53370667 -113279629 + L1Md_T LINE L1 459 2308 -3575 4 992 34431 65 5 13 chrX 53370670 53376807 -113273489 - L1Md_F2 LINE L1 -12 6570 487 4 992 8331 31 1 0 chrX 53376917 53377980 -113272316 + L1Md_T LINE L1 2262 3325 -2558 4 992 12207 32 0 0 chrX 53377972 53379492 -113270804 + L1Md_T LINE L1 4067 5586 -297 4 992 8414 33 1 0 chrX 53379492 53380537 -113269759 + L1Md_T LINE L1 5587 6582 0 4 992 251 333 0 0 chrX 53380626 53380698 -113269598 - B3 SINE B2 -13 203 132 4 992 481 291 65 13 chrX 53380725 53380878 -113269418 + B3 SINE B2 3 163 -53 4 992 189 0 0 0 chrX 53381389 53381410 -113268886 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 4 992 274 357 41 0 chrX 53381928 53382026 -113268270 - B1F1 SINE Alu -47 102 1 4 992 305 295 2 0 chrX 53381944 53382030 -113268266 - B4A SINE B4 -60 164 80 4 992 220 245 155 87 chrX 53382037 53382140 -113268156 - B1_Mur1 SINE Alu 0 149 40 4 992 243 61 0 0 chrX 53382577 53382610 -113267686 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 992 186 143 0 0 chrX 53382771 53382806 -113267490 + (T)n Simple_repeat Simple_repeat 1 35 0 4 992 3974 103 5 37 chrX 53383252 53383875 -113266421 - L1_Mus3 LINE L1 -1 6637 6035 4 992 911 113 0 0 chrX 53383875 53384016 -113266280 - L1_Mus3 LINE L1 -712 5926 5786 4 992 17659 157 10 3 chrX 53384014 53387323 -113262973 - L1_Mm LINE L1 -1105 4778 1445 4 992 369 290 9 18 chrX 53387576 53387685 -113262611 + ID_B1 SINE B4 102 209 -15 4 992 28 0 0 0 chrX 53387945 53387973 -113262323 + AT_rich Low_complexity Low_complexity 1 28 0 4 992 232 326 0 0 chrX 53387987 53388036 -113262260 - ID4 SINE ID -31 52 4 4 992 249 261 0 0 chrX 53388117 53388163 -113262133 - B3 SINE B2 -56 160 115 4 992 219 296 123 27 chrX 53388270 53388343 -113261953 + ID4 SINE ID 4 83 0 4 992 684 241 121 96 chrX 53388615 53388812 -113261484 + B4A SINE B4 1 217 -75 4 992 929 167 0 0 chrX 53388812 53388956 -113261340 + B1_Mus1 SINE Alu 2 145 -3 4 992 684 241 121 96 chrX 53388956 53389038 -113261258 + B4A SINE B4 218 287 -5 4 992 921 272 9 33 chrX 53389235 53389448 -113260848 + B3 SINE B2 2 209 -7 5 992 253 311 101 28 chrX 53390251 53390360 -113259936 - B1F SINE Alu -32 117 1 5 992 24 0 0 0 chrX 53390510 53390534 -113259762 + AT_rich Low_complexity Low_complexity 1 24 0 5 992 237 33 0 0 chrX 53390824 53390854 -113259442 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 992 5283 126 34 1 chrX 53392123 53392957 -113257339 - Lx LINE L1 -7 6647 5787 5 992 16908 169 14 8 chrX 53392957 53395091 -113255205 - L1VL2 LINE L1 -1126 4757 2615 5 992 360 0 0 0 chrX 53395091 53395131 -113255165 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 992 16908 179 35 35 chrX 53395131 53397453 -113252843 - L1VL2 LINE L1 -3269 2614 300 5 992 632 165 16 32 chrX 53397437 53397562 -113252734 - L1VL2 LINE L1 -5918 716 594 5 992 730 302 87 23 chrX 53397697 53397961 -113252335 - B4A SINE B4 -3 289 9 5 992 1088 203 19 0 chrX 53398199 53398406 -113251890 - B3 SINE B2 -5 211 1 5 992 477 305 50 0 chrX 53398552 53398693 -113251603 - B1F SINE Alu -1 148 1 5 992 1108 215 0 5 chrX 53398731 53398937 -113251359 - B3 SINE B2 -11 205 1 5 992 989 216 20 20 chrX 53399370 53399573 -113250723 - B3 SINE B2 -10 206 4 5 992 888 174 0 0 chrX 53399606 53399750 -113250546 - B1_Mur2 SINE Alu -5 144 1 5 992 4075 139 19 23 chrX 53401132 53401874 -113248422 - YREP_Mm Unknown Unknown -35 1777 1039 5 992 276 23 91 0 chrX 53402045 53402089 -113248207 - YREP_Mm Unknown Unknown -779 1033 986 5 992 284 271 181 95 chrX 53402094 53402326 -113247970 - L2 LINE L2 -1119 2300 2049 5 992 203 138 24 48 chrX 53402438 53402522 -113247774 + A-rich Low_complexity Low_complexity 1 82 0 5 992 504 369 39 29 chrX 53402535 53402739 -113247557 + B4A SINE B4 83 288 -4 5 992 184 298 62 21 chrX 53402755 53402851 -113247445 - L2 LINE L2 -1394 2025 1926 5 992 291 329 43 18 chrX 53403214 53403378 -113246918 - L2 LINE L2 -1758 1661 1494 5 992 23 33 0 0 chrX 53403580 53403610 -113246686 + AT_rich Low_complexity Low_complexity 1 30 0 5 992 4926 41 5 0 chrX 53405085 53405675 -113244621 - L1Md_F2 LINE L1 -3 6579 5987 5 992 6024 127 3 9 chrX 53406750 53407707 -113242589 - Lx3A LINE L1 -7 6974 6024 5 992 295 313 57 50 chrX 53410201 53410463 -113239833 + RMER17C LTR ERVK 83 346 -64 5 992 22 35 0 0 chrX 53410712 53410741 -113239555 + AT_rich Low_complexity Low_complexity 1 29 0 5 992 579 305 23 0 chrX 53411033 53411207 -113239089 - B4A SINE B4 -43 249 72 5 992 353 181 89 77 chrX 53411454 53411641 -113238655 - RMER4B LTR ERVK -330 255 18 5 992 418 293 113 24 chrX 53411810 53411941 -113238355 + RMER15 LTR ERVL 302 437 -138 5 992 399 21 0 0 chrX 53411941 53411989 -113238307 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 5 992 418 293 113 24 chrX 53411989 53412070 -113238226 + RMER15 LTR ERVL 438 532 -43 5 992 636 200 55 35 chrX 53413068 53413213 -113237083 + B1_Mur1 SINE Alu 2 149 0 5 992 566 173 9 9 chrX 53413878 53413983 -113236313 + RMER15 LTR ERVL 1 105 -470 5 992 2474 174 8 46 chrX 53413968 53414445 -113235851 + RMER15 LTR ERVL 47 505 -70 5 992 269 318 62 18 chrX 53414529 53414641 -113235655 - RSINE1 SINE B4 -48 117 1 5 992 614 266 18 37 chrX 53414729 53414893 -113235403 - RSINE1 SINE B4 -2 163 3 5 992 1226 165 25 8 chrX 53415667 53415911 -113234385 - Lx2 LINE L1 -7 6990 6743 5 992 228 86 0 0 chrX 53416048 53416083 -113234213 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 5 992 559 307 23 19 chrX 53416643 53416859 -113233437 + RLTR45 LTR ERVK 266 482 0 5 992 404 360 0 9 chrX 53417121 53417236 -113233060 - PB1 SINE Alu -2 125 12 5 992 230 302 0 0 chrX 53417267 53417310 -113232986 - PB1 SINE Alu -73 54 12 5 992 700 208 76 0 chrX 53417463 53417607 -113232689 + ORR1C2 LTR MaLR 230 384 0 5 992 1867 184 22 3 chrX 53417686 53418041 -113232255 - MERVL_2A-int LTR ERVL -3505 2256 1895 5 992 3036 227 48 18 chrX 53418041 53419099 -113231197 + Lx6 LINE L1 5398 6494 -966 5 992 317 242 21 10 chrX 53419710 53419806 -113230490 - RMER19B LTR ERVK -2 900 804 5 992 3475 180 71 41 chrX 53419821 53420247 -113230049 + RMER17D LTR ERVK 1 445 -444 5 992 609 14 0 0 chrX 53420247 53420317 -113229979 + (TC)n Simple_repeat Simple_repeat 2 71 0 5 992 3475 180 71 41 chrX 53420317 53420753 -113229543 + RMER17D LTR ERVK 446 889 0 5 992 2904 151 29 37 chrX 53420809 53421402 -113228894 + L1VL4 LINE L1 356 943 -5359 5 992 2684 103 9 7 chrX 53421386 53421835 -113228461 + MusHAL1 LINE L1 1020 1469 -1243 5 992 4648 211 26 31 chrX 53421863 53423083 -113227213 + MYSERV6-int LTR ERVK 2491 3704 -5255 5 992 698 78 56 10 chrX 53423083 53423287 -113227009 + (TCTA)n Simple_repeat Simple_repeat 1 213 0 5 992 486 103 0 0 chrX 53423294 53423381 -113226915 + (TA)n Simple_repeat Simple_repeat 2 88 0 5 992 831 81 52 8 chrX 53423382 53423769 -113226527 + (TCTA)n Simple_repeat Simple_repeat 1 404 0 5 992 24 53 0 0 chrX 53423770 53423808 -113226488 + AT_rich Low_complexity Low_complexity 1 38 0 5 992 326 113 61 20 chrX 53423813 53423912 -113226384 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 5 992 2485 256 15 15 chrX 53423970 53424709 -113225587 + MYSERV6-int LTR ERVK 4261 4999 -261 5 992 6345 135 8 5 chrX 53424712 53426305 -113223991 - L1_Mus4 LINE L1 -5 6631 5032 5 992 604 155 141 51 chrX 53426462 53426618 -113223678 + RLTR20A LTR ERVK 1 170 -393 5 992 1164 89 26 5 chrX 53426775 53426968 -113223328 + L1_Mus3 LINE L1 6438 6634 -4 5 992 679 261 60 24 chrX 53426968 53427219 -113223077 + RLTR20A LTR ERVK 148 407 -134 5 992 450 0 0 0 chrX 53427219 53427269 -113223027 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 992 241 308 128 0 chrX 53427269 53427347 -113222949 + RLTR20A LTR ERVK 447 534 0 5 992 1257 246 50 48 chrX 53427347 53427804 -113222492 + MYSERV-int LTR ERVK 4378 4835 -1715 5 992 692 246 38 30 chrX 53427832 53428067 -113222229 + Lx4B LINE L1 6820 7056 -2 5 992 11699 64 2 0 chrX 53428116 53429686 -113220610 + L1Md_F2 LINE L1 4013 5586 -297 5 992 8121 49 1 5 chrX 53429686 53430684 -113219612 + L1Md_F2 LINE L1 5587 6580 -2 5 992 255 191 0 0 chrX 53430953 53431021 -113219275 + (TGG)n Simple_repeat Simple_repeat 3 70 0 5 992 396 0 0 0 chrX 53431079 53431123 -113219173 + (TTA)n Simple_repeat Simple_repeat 1 44 0 5 992 8143 26 0 0 chrX 53431518 53432961 -113217335 - L1Md_T LINE L1 0 6582 5140 5 992 385 297 108 8 chrX 53433114 53433243 -113217053 + B1_Mur1 SINE Alu 6 147 -2 5 992 274 342 25 8 chrX 53433276 53433397 -113216899 - B1F1 SINE Alu -6 143 21 5 992 1905 63 4 0 chrX 53435038 53435290 -113215006 - L1_Mus1 LINE L1 -132 6435 6183 5 992 616 105 9 0 chrX 53435292 53435397 -113214899 + L1_Mus1 LINE L1 6459 6564 -3 5 992 25 0 0 0 chrX 53435397 53435422 -113214874 + AT_rich Low_complexity Low_complexity 1 25 0 5 992 507 17 0 0 chrX 53436277 53436337 -113213959 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 992 1012 101 14 0 chrX 53437824 53437963 -113212333 - B1_Mm SINE Alu -2 145 5 5 992 25 0 0 0 chrX 53438590 53438615 -113211681 + AT_rich Low_complexity Low_complexity 1 25 0 5 992 336 167 0 0 chrX 53439335 53439407 -113210889 + (CA)n Simple_repeat Simple_repeat 2 73 0 5 992 1636 155 63 127 chrX 53439560 53440017 -113210279 - RLTR23 LTR ERV1 -2 428 1 5 992 3082 179 24 27 chrX 53440148 53440781 -113209515 - RLTR13A LTR ERVK -224 631 1 5 992 272 269 0 15 chrX 53442751 53442819 -113207477 - B1_Mur4 SINE Alu -5 145 79 5 992 338 220 0 0 chrX 53442799 53442858 -113207438 - URR1B DNA MER1_type -111 114 56 5 992 531 241 8 33 chrX 53442825 53442945 -113207351 - B1_Mus2 SINE Alu -25 122 6 5 992 298 237 0 110 chrX 53442850 53442959 -113207337 - MT2B2 LTR ERVL -331 253 157 5 992 212 383 0 0 chrX 53443643 53443724 -113206572 + PB1D10 SINE Alu 29 109 -8 5 992 593 323 20 5 chrX 53443731 53443933 -113206363 + ID_B1 SINE B4 1 205 -19 5 992 237 197 0 0 chrX 53444610 53444676 -113205620 + GA-rich Low_complexity Low_complexity 2 67 0 5 992 239 172 0 49 chrX 53444974 53445035 -113205261 + T-rich Low_complexity Low_complexity 2 59 0 5 992 21 0 0 0 chrX 53445165 53445186 -113205110 + AT_rich Low_complexity Low_complexity 1 21 0 5 992 248 350 10 10 chrX 53445368 53445469 -113204827 - PB1D10 SINE Alu -5 112 12 5 992 1137 202 49 4 chrX 53445905 53446149 -113204147 + Lx9 LINE L1 6553 6807 -837 5 992 612 261 75 21 chrX 53446223 53446411 -113203885 - B3A SINE B2 0 198 1 5 992 237 272 7 16 chrX 53447231 53447295 -113203001 - PB1D10 SINE Alu -55 72 6 5 992 270 323 94 31 chrX 53447331 53447491 -113202805 + L2 LINE L2 780 949 -2470 5 992 235 289 48 12 chrX 53447564 53447648 -113202648 - MIR SINE MIR -62 200 114 5 992 256 383 103 9 chrX 53447791 53448015 -113202281 + L2 LINE L2 999 1243 -2176 5 992 562 337 140 37 chrX 53448341 53448855 -113201441 + L2 LINE L2 1923 2489 -930 5 992 216 233 43 43 chrX 53449096 53449190 -113201106 + GA-rich Low_complexity Low_complexity 3 96 0 5 992 710 337 51 60 chrX 53449195 53449747 -113200549 + YREP_Mm Unknown Unknown 1199 1745 -67 5 992 24 0 0 0 chrX 53449973 53449997 -113200299 + AT_rich Low_complexity Low_complexity 1 24 0 5 992 22 0 0 0 chrX 53450048 53450070 -113200226 + AT_rich Low_complexity Low_complexity 1 22 0 5 992 1159 82 0 0 chrX 53450802 53450949 -113199347 + B1_Mm SINE Alu 1 147 0 5 992 1216 163 13 4 chrX 53451036 53451296 -113199000 + Lx3C LINE L1 6657 6974 -2 5 992 1831 243 78 42 chrX 53451594 53452148 -113198148 - RLTR31A_Mm LTR ERVK 0 584 11 5 992 546 256 61 15 chrX 53452327 53452458 -113197838 + B1_Mur1 SINE Alu 5 141 -8 5 992 22 35 0 0 chrX 53452619 53452648 -113197648 + AT_rich Low_complexity Low_complexity 1 29 0 5 992 356 204 114 9 chrX 53452971 53453085 -113197211 + Lx9 LINE L1 7518 7643 -1 5 992 259 175 122 24 chrX 53453299 53453381 -113196915 + B1_Mur4 SINE Alu 44 133 -17 5 992 369 272 112 139 chrX 53453353 53453656 -113196640 - RLTR14 LTR ERV1 -13 369 75 5 992 225 88 52 17 chrX 53453656 53453714 -113196582 + T-rich Low_complexity Low_complexity 2 61 0 5 992 527 200 142 0 chrX 53453714 53453834 -113196462 + MTC LTR MaLR 12 148 -273 5 992 561 52 0 0 chrX 53453880 53453957 -113196339 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 992 1268 229 8 19 chrX 53453993 53454256 -113196040 + MTC LTR MaLR 162 421 0 5 992 354 193 0 0 chrX 53454288 53454345 -113195951 - RLTR14 LTR ERV1 -323 59 3 5 992 414 200 0 0 chrX 53455071 53455146 -113195150 - ID_B1 SINE B4 -51 173 99 6 992 350 302 24 65 chrX 53455650 53455774 -113194522 + RSINE1 SINE B4 5 123 -42 6 992 32112 71 5 1 chrX 53456214 53461400 -113188896 + L1Md_F3 LINE L1 420 5585 -298 6 992 7872 47 5 2 chrX 53461401 53462382 -113187914 + L1Md_F3 LINE L1 5587 6570 -14 6 992 540 321 30 7 chrX 53462382 53462517 -113187779 + B3A SINE B2 28 165 -33 6 992 252 246 114 51 chrX 53462872 53462987 -113187309 + PB1D10 SINE Alu 4 119 -1 6 992 237 358 99 18 chrX 53463016 53463127 -113187169 + PB1D7 SINE Alu 1 120 0 6 992 754 159 56 0 chrX 53463201 53463327 -113186969 - B1_Mus2 SINE Alu -9 138 6 6 992 303 242 22 124 chrX 53463352 53463489 -113186807 + B3A SINE B2 60 182 -16 6 992 209 197 14 40 chrX 53465824 53465898 -113184398 + CT-rich Low_complexity Low_complexity 1 72 0 6 992 216 118 29 0 chrX 53466340 53466374 -113183922 + B3A SINE B2 37 71 -127 6 992 416 316 181 28 chrX 53466797 53467012 -113183284 - B4A SINE B4 0 292 45 6 992 21 57 0 0 chrX 53467331 53467366 -113182930 + AT_rich Low_complexity Low_complexity 1 35 0 6 992 24 67 0 0 chrX 53467399 53467444 -113182852 + AT_rich Low_complexity Low_complexity 1 45 0 6 992 318 146 73 0 chrX 53467517 53467572 -113182724 + MTE2b LTR MaLR 290 348 -31 6 992 542 228 65 58 chrX 53467753 53467907 -113182389 + B3 SINE B2 41 195 -21 6 992 410 235 162 17 chrX 53468867 53468984 -113181312 + B1_Mur1 SINE Alu 3 136 -13 6 992 257 290 16 0 chrX 53469475 53469537 -113180759 - ID SINE ID -161 63 1 6 992 212 383 0 0 chrX 53469544 53469625 -113180671 - PB1D10 SINE Alu -8 109 29 6 992 298 237 0 110 chrX 53470309 53470418 -113179878 + MT2B2 LTR ERVL 157 253 -331 6 992 531 241 8 33 chrX 53470323 53470443 -113179853 + B1_Mus2 SINE Alu 6 122 -25 6 992 338 220 0 0 chrX 53470410 53470469 -113179827 + URR1B DNA MER1_type 56 114 -111 6 992 272 269 0 15 chrX 53470449 53470517 -113179779 + B1_Mur4 SINE Alu 79 145 -5 6 992 3082 179 24 27 chrX 53472487 53473120 -113177176 + RLTR13A LTR ERVK 1 631 -224 6 992 1636 155 63 127 chrX 53473251 53473708 -113176588 + RLTR23 LTR ERV1 1 428 -2 6 992 354 162 0 0 chrX 53473861 53473935 -113176361 + (TG)n Simple_repeat Simple_repeat 2 75 0 6 992 24 0 0 0 chrX 53474655 53474679 -113175617 + AT_rich Low_complexity Low_complexity 1 24 0 6 992 1012 101 14 0 chrX 53475306 53475445 -113174851 + B1_Mm SINE Alu 5 145 -2 6 15 7229 64 0 0 chrX 53476884 53477842 -113172454 - L1Md_T LINE L1 0 6582 5625 6 993 8229 31 0 0 chrX 53477840 53478883 -113171413 + L1_Mm LINE L1 2454 3496 -2387 6 993 537 16 0 0 chrX 53478947 53479009 -113171287 + (TC)n Simple_repeat Simple_repeat 1 62 0 6 993 25 0 0 0 chrX 53479832 53479857 -113170439 + AT_rich Low_complexity Low_complexity 1 25 0 6 993 616 105 9 0 chrX 53479857 53479962 -113170334 - L1_Mus1 LINE L1 -3 6564 6459 6 993 1907 68 4 0 chrX 53479964 53480216 -113170080 + L1_Mus1 LINE L1 6183 6435 -132 6 993 235 235 73 0 chrX 53480224 53480292 -113170004 - LTR40c LTR ERVL -54 411 339 6 993 274 342 25 8 chrX 53481856 53481977 -113168319 + B1F1 SINE Alu 21 143 -6 6 993 387 297 108 8 chrX 53482010 53482139 -113168157 - B1_Mur1 SINE Alu -2 147 6 6 993 198 0 0 0 chrX 53482372 53482394 -113167902 + (A)n Simple_repeat Simple_repeat 1 22 0 6 993 441 0 0 0 chrX 53482448 53482497 -113167799 + (TAA)n Simple_repeat Simple_repeat 1 49 0 6 993 288 186 0 0 chrX 53482543 53482602 -113167694 + (CTA)n Simple_repeat Simple_repeat 1 59 0 6 993 1990 185 37 15 chrX 53483375 53483780 -113166516 + MTC LTR MaLR 1 414 -7 6 993 774 132 0 0 chrX 53485123 53485259 -113165037 + (TC)n Simple_repeat Simple_repeat 1 136 0 6 993 5070 259 65 59 chrX 53485319 53485941 -113164355 - Lx6 LINE L1 -98 7362 6755 6 993 243 0 0 0 chrX 53485941 53485968 -113164328 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 993 5070 253 50 42 chrX 53485968 53487291 -113163005 - Lx6 LINE L1 -706 6754 5407 6 993 33334 58 1 47 chrX 53487292 53494001 -113156295 - L1Md_F2 LINE L1 -3 6582 83 6 993 5230 91 6 23 chrX 53494002 53494878 -113155418 - L1_Mm LINE L1 -3782 2101 1241 6 993 225 65 0 0 chrX 53494974 53495005 -113155291 + (CAAA)n Simple_repeat Simple_repeat 3 33 0 6 993 1318 174 20 0 chrX 53495145 53495392 -113154904 + Lx2 LINE L1 6743 6994 -3 6 993 651 306 19 12 chrX 53496166 53496328 -113153968 + RSINE1 SINE B4 3 165 0 6 993 216 381 10 0 chrX 53496418 53496515 -113153781 + RSINE1 SINE B4 1 98 -67 6 993 2469 158 18 93 chrX 53496614 53497160 -113153136 - RMER15 LTR ERVL -70 505 1 6 993 637 207 55 35 chrX 53497828 53497973 -113152323 - B1_Mur1 SINE Alu 0 149 2 6 993 5844 89 4 11 chrX 53498235 53500000 -113150296 + L1Md_Gf LINE L1 201 2049 -3837 6 993 18013 38 1 0 chrX 53500000 53502335 -113147961 + L1Md_F3 LINE L1 2047 4383 -1500 1 993 3370 54 0 0 chrX 53502329 53502770 -113147526 + L1Md_F3 LINE L1 5146 5586 -297 1 993 8186 32 6 9 chrX 53502770 53503759 -113146537 + L1Md_F3 LINE L1 5587 6572 -12 1 993 46 78 0 0 chrX 53503763 53503865 -113146431 + AT_rich Low_complexity Low_complexity 1 102 0 2 993 24 32 0 0 chrX 53504686 53504717 -113145579 + AT_rich Low_complexity Low_complexity 1 31 0 3 993 226 208 190 25 chrX 53504762 53504841 -113145455 - PB1 SINE Alu -8 119 28 4 993 255 286 8 70 chrX 53505315 53505443 -113144853 + PB1 SINE Alu 1 120 -7 5 993 278 196 173 67 chrX 53505718 53505822 -113144474 - PB1D9 SINE Alu -5 115 1 6 993 462 315 191 3 chrX 53505822 53506121 -113144175 + L2 LINE L2 1949 2303 -1116 7 993 256 306 111 37 chrX 53506125 53506342 -113143954 + YREP_Mm Unknown Unknown 988 1220 -592 8 993 898 74 7 0 chrX 53506446 53506581 -113143715 + L1Md_F2 LINE L1 6447 6582 0 9 993 716 126 0 16 chrX 53506796 53506925 -113143371 + (GGGA)n Simple_repeat Simple_repeat 2 128 0 1 993 665 346 55 57 chrX 53506952 53507529 -113142767 + YREP_Mm Unknown Unknown 1202 1777 -35 8 993 499 179 11 0 chrX 53507724 53507819 -113142477 - BC1_Mm scRNA scRNA -56 96 1 1 993 420 20 0 0 chrX 53507912 53507961 -113142335 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 993 748 189 23 0 chrX 53508755 53508887 -113141409 + B1_Mur4 SINE Alu 9 143 -7 1 993 6556 105 4 7 chrX 53509078 53510453 -113139843 + L1_Mus2 LINE L1 5192 6566 0 1 993 305 206 31 10 chrX 53510764 53510862 -113139434 + (TA)n Simple_repeat Simple_repeat 1 100 0 1 993 736 317 22 9 chrX 53510869 53511098 -113139198 + B4A SINE B4 1 232 -60 1 993 682 243 75 11 chrX 53511100 53511287 -113139009 + B3 SINE B2 5 203 -13 1 993 237 83 0 0 chrX 53511287 53511323 -113138973 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 993 341 297 26 40 chrX 53511805 53511956 -113138340 + B1F SINE Alu 1 149 0 1 993 376 290 65 104 chrX 53512072 53512226 -113138070 - B3 SINE B2 -4 212 65 2 993 396 300 0 0 chrX 53512273 53512373 -113137923 - ID_B1 SINE B4 -23 201 102 2 993 22 35 0 0 chrX 53513178 53513207 -113137089 + AT_rich Low_complexity Low_complexity 1 29 0 2 993 369 0 0 0 chrX 53513255 53513296 -113137000 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 993 222 284 147 69 chrX 53513776 53513878 -113136418 + B1F SINE Alu 40 149 0 2 993 325 316 20 10 chrX 53514865 53514964 -113135332 - B3 SINE B2 -9 207 108 2 993 221 276 87 58 chrX 53514961 53515065 -113135231 - B4A SINE B4 -137 155 49 2 993 354 252 97 18 chrX 53515113 53515226 -113135070 - B3 SINE B2 -64 152 31 2 993 261 0 0 0 chrX 53515226 53515255 -113135041 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2 993 1023 100 7 0 chrX 53515260 53515400 -113134896 - B1_Mus1 SINE Alu -6 142 2 2 993 302 227 0 0 chrX 53515523 53515598 -113134698 + Lx9 LINE L1 7534 7608 -36 3 993 360 0 0 0 chrX 53515610 53515650 -113134646 + (TAA)n Simple_repeat Simple_repeat 2 41 0 3 993 835 217 0 37 chrX 53515656 53515847 -113134449 - B2_Mm2 SINE B2 -10 185 2 3 993 24 67 0 0 chrX 53516045 53516090 -113134206 + AT_rich Low_complexity Low_complexity 1 45 0 3 993 2709 108 37 0 chrX 53516326 53516733 -113133563 + L1_Mus2 LINE L1 6145 6566 0 3 993 4693 58 0 0 chrX 53517175 53517798 -113132498 - L1Md_F2 LINE L1 -919 4964 4342 3 993 4891 68 0 0 chrX 53517796 53518446 -113131850 + L1Md_F2 LINE L1 4936 5585 -298 3 993 7578 62 14 1 chrX 53518448 53519429 -113130867 + L1Md_F2 LINE L1 5588 6581 -1 3 993 349 260 0 0 chrX 53519638 53519715 -113130581 + PB1D10 SINE Alu 27 103 -14 3 993 1529 129 39 16 chrX 53519870 53520177 -113130119 - MusHAL1 LINE L1 -1789 923 610 3 993 405 244 17 17 chrX 53520977 53521094 -113129202 + MurSatRep1 Unknown Unknown 627 743 -1394 3 993 312 273 56 32 chrX 53521180 53521305 -113128991 - L1MD LINE L1 -829 5317 5190 3 993 595 193 88 0 chrX 53521375 53521489 -113128807 - B1_Mus1 SINE Alu 0 148 25 4 993 309 51 0 0 chrX 53521495 53521534 -113128762 + (CCA)n Simple_repeat Simple_repeat 2 40 0 4 993 357 24 0 0 chrX 53521799 53521841 -113128455 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 993 50 31 0 0 chrX 53521858 53521922 -113128374 + AT_rich Low_complexity Low_complexity 1 64 0 4 993 937 228 99 122 chrX 53521927 53522350 -113127946 - MT2A LTR ERVL -47 554 1 4 993 237 260 8 4 chrX 53522350 53522435 -113127861 - L1MD LINE L1 -1213 4933 4848 3 993 505 222 101 90 chrX 53522571 53522665 -113127631 + B3A SINE B2 7 102 -96 4 993 1057 75 0 52 chrX 53522665 53522819 -113127477 + B1_Mus1 SINE Alu 2 147 -1 4 993 505 222 101 90 chrX 53522819 53522912 -113127384 + B3A SINE B2 103 196 -2 4 993 279 310 62 0 chrX 53523034 53523147 -113127149 - Lx5 LINE L1 -84 6966 6847 4 993 31 0 0 0 chrX 53523717 53523748 -113126548 + AT_rich Low_complexity Low_complexity 1 31 0 4 993 192 158 0 0 chrX 53523748 53523786 -113126510 + (CAA)n Simple_repeat Simple_repeat 2 39 0 4 993 563 329 0 19 chrX 53524714 53524869 -113125427 - RSINE1 SINE B4 -2 163 12 5 993 447 208 98 33 chrX 53525020 53525204 -113125092 + Lx7 LINE L1 7501 7696 0 5 993 320 335 46 13 chrX 53525448 53525615 -113124681 - MLT1G LTR MaLR -321 234 56 5 993 1419 134 0 13 chrX 53525532 53525767 -113124529 - CYRA11_Mm Unknown Y-chromosome 0 617 386 5 993 924 183 61 28 chrX 53525769 53525983 -113124313 + URR1B DNA MER1_type 4 224 -1 5 993 947 164 0 6 chrX 53525983 53526155 -113124141 - CYRA11_Mm Unknown Y-chromosome -446 171 1 5 993 227 342 199 0 chrX 53526025 53526206 -113124090 - MLT1D LTR MaLR -265 240 24 5 993 1735 106 0 4 chrX 53526288 53526565 -113123731 - L1_Mus4 LINE L1 0 6636 6367 5 993 786 117 0 27 chrX 53526566 53526715 -113123581 - Lx LINE L1 -2 6652 6508 5 993 297 211 37 28 chrX 53527133 53527240 -113123056 - Lx2A1 LINE L1 -4 7004 6897 5 993 546 262 121 36 chrX 53527240 53527406 -113122890 - MTB_Mm LTR MaLR -60 347 168 5 993 21 36 0 0 chrX 53527418 53527446 -113122850 + AT_rich Low_complexity Low_complexity 1 28 0 6 993 870 245 15 0 chrX 53527463 53527659 -113122637 - B3 SINE B2 -17 199 1 6 993 442 312 0 0 chrX 53527663 53527772 -113122524 - MTB_Mm LTR MaLR -209 210 102 5 993 335 261 61 47 chrX 53527776 53527989 -113122307 + Lx7 LINE L1 5852 6067 -1629 6 993 989 267 9 41 chrX 53528307 53528623 -113121673 + Lx7 LINE L1 6724 7029 -667 6 993 455 133 0 0 chrX 53528620 53528695 -113121601 - Lx2 LINE L1 -1059 5938 5864 6 993 523 114 23 0 chrX 53528685 53528773 -113121523 - L1_Mur1 LINE L1 -3228 2658 2569 6 993 394 286 17 8 chrX 53528846 53528966 -113121330 - MTB_Mm LTR MaLR -300 121 1 5 993 314 245 39 19 chrX 53530475 53530579 -113119717 + BC1_Mm scRNA scRNA 10 115 -37 6 993 213 233 0 23 chrX 53530577 53530621 -113119675 + ID SINE ID 8 50 -174 6 993 312 27 0 0 chrX 53531900 53531937 -113118359 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 993 387 0 0 0 chrX 53532665 53532708 -113117588 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 993 489 105 0 0 chrX 53532721 53532807 -113117489 + (GA)n Simple_repeat Simple_repeat 1 86 0 6 993 246 254 0 0 chrX 53534100 53534155 -113116141 - MER33 DNA MER1_type -264 60 6 7 993 252 200 32 32 chrX 53535970 53536032 -113114264 + MER3 DNA MER1_type 46 107 -102 7 993 1116 95 0 0 chrX 53536195 53536342 -113113954 + B1_Mus1 SINE Alu 2 148 0 7 993 758 236 10 65 chrX 53536341 53536540 -113113756 + B3 SINE B2 27 214 -2 7 993 264 290 0 0 chrX 53537252 53537321 -113112975 + CT-rich Low_complexity Low_complexity 1 69 0 7 993 401 54 18 0 chrX 53538128 53538184 -113112112 + (TTA)n Simple_repeat Simple_repeat 1 57 0 7 993 574 243 0 0 chrX 53539447 53539558 -113110738 + B1_Mur1 SINE Alu 26 136 -13 7 993 372 135 74 7 chrX 53539949 53540098 -113110198 + (TA)n Simple_repeat Simple_repeat 1 159 0 7 993 307 160 27 0 chrX 53540099 53540174 -113110122 + (TG)n Simple_repeat Simple_repeat 1 77 0 7 993 895 253 83 22 chrX 53540174 53540663 -113109633 + L1M2 LINE L1 3493 4038 -2105 7 993 291 163 14 98 chrX 53540664 53540807 -113109489 + (TATAA)n Simple_repeat Simple_repeat 5 135 0 8 993 223 158 15 111 chrX 53540848 53540983 -113109313 + (TATAA)n Simple_repeat Simple_repeat 1 122 0 8 993 288 133 38 95 chrX 53541042 53541200 -113109096 + (TATAA)n Simple_repeat Simple_repeat 2 150 0 8 993 234 168 29 94 chrX 53541239 53541377 -113108919 + (TATAA)n Simple_repeat Simple_repeat 1 129 0 8 993 685 303 36 6 chrX 53541387 53541719 -113108577 + L1M2 LINE L1 3991 4332 -1808 7 993 37 23 0 0 chrX 53541720 53541764 -113108532 + AT_rich Low_complexity Low_complexity 1 44 0 8 993 4439 12 0 0 chrX 53541811 53542331 -113107965 - L1Md_T LINE L1 0 6582 6090 8 993 1780 9 0 0 chrX 53542331 53542544 -113107752 + L1Md_T LINE L1 5903 6115 -467 8 993 435 288 0 26 chrX 53542570 53542684 -113107612 + B1F SINE Alu 1 111 -38 8 993 718 271 58 60 chrX 53542690 53543017 -113107279 + L1M2 LINE L1 4398 4748 -1395 7 993 1042 114 0 0 chrX 53543017 53543157 -113107139 + B1_Mus1 SINE Alu 3 142 -6 8 993 718 271 58 60 chrX 53543157 53543343 -113106953 + L1M2 LINE L1 4749 4910 -1233 7 993 314 257 66 12 chrX 53543359 53543370 -113106926 + PB1D10 SINE Alu 15 49 -68 8 993 324 239 0 15 chrX 53543370 53543438 -113106858 + ID_B1 SINE B4 107 173 -51 8 993 314 257 66 12 chrX 53543438 53543456 -113106840 + PB1D10 SINE Alu 50 116 -1 8 993 480 239 21 14 chrX 53543492 53543632 -113106664 + L1_Rod LINE L1 4847 4987 -860 8 993 492 280 83 18 chrX 53543825 53544255 -113106041 + L1M2 LINE L1 5074 5541 -633 7 993 760 169 15 0 chrX 53544273 53544409 -113105887 + B1_Mur4 SINE Alu 3 140 -10 8 993 853 157 103 20 chrX 53544690 53544885 -113105411 + RMER1C Other Other 1132 1342 0 8 993 1013 16 93 0 chrX 53544932 53545061 -113105235 + L1Md_F2 LINE L1 6430 6570 -12 9 993 306 0 0 0 chrX 53545115 53545149 -113105147 + (A)n Simple_repeat Simple_repeat 1 34 0 9 993 189 0 0 0 chrX 53545665 53545686 -113104610 + (CACTC)n Simple_repeat Simple_repeat 3 23 0 9 993 225 345 89 25 chrX 53547269 53547471 -113102825 - MER2 DNA MER2_type 0 345 131 9 993 831 160 28 7 chrX 53547701 53547846 -113102450 + B1_Mur4 SINE Alu 1 148 -2 9 993 881 165 5 97 chrX 53547935 53548130 -113102166 - URR1A DNA MER1_type -3 223 47 9 993 204 122 0 0 chrX 53548474 53548515 -113101781 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 9 993 780 249 35 12 chrX 53549544 53549715 -113100581 + B3A SINE B2 8 182 -16 9 993 2917 76 14 48 chrX 53549759 53550173 -113100123 - MTB LTR MaLR 0 400 1 9 993 404 122 0 39 chrX 53550175 53550234 -113100062 - MTB-int LTR MaLR -2 1096 1040 9 993 2846 80 2 15 chrX 53550234 53550639 -113099657 - L1Md_F2 LINE L1 -1 6581 6182 9 993 404 122 0 39 chrX 53550639 53550656 -113099640 - MTB-int LTR MaLR -59 1039 1023 9 993 3241 87 14 30 chrX 53550640 53551033 -113099263 - MTB-int LTR MaLR -597 501 121 9 993 4560 134 17 1 chrX 53551033 53551730 -113098566 - Lx LINE L1 -5 6649 5942 1 993 3241 87 14 30 chrX 53551730 53551845 -113098451 - MTB-int LTR MaLR -978 120 1 9 993 2876 225 93 27 chrX 53552025 53552792 -113097504 + RMER1C Other Other 415 1217 -125 1 993 609 52 0 0 chrX 53552794 53552871 -113097425 + (TCTCCC)n Simple_repeat Simple_repeat 3 79 0 1 993 712 146 8 15 chrX 53552877 53553009 -113097287 + RMER1C Other Other 1199 1329 -13 1 993 1091 86 0 0 chrX 53553043 53553182 -113097114 + B1_Mus1 SINE Alu 1 139 -9 1 993 1433 92 0 5 chrX 53555198 53555394 -113094902 + B2_Mm2 SINE B2 1 195 0 1 993 325 330 11 0 chrX 53555921 53556009 -113094287 + MER58A DNA MER1_type 83 171 -53 1 993 647 264 85 22 chrX 53556100 53556389 -113093907 + Lx9 LINE L1 5796 6097 -1599 1 993 869 234 80 10 chrX 53556420 53556619 -113093677 + B3 SINE B2 1 213 -3 1 993 347 321 30 22 chrX 53556757 53556891 -113093405 + Lx9 LINE L1 6493 6627 -1017 1 993 623 200 72 22 chrX 53557190 53557328 -113092968 + B1_Mur4 SINE Alu 6 150 0 1 993 1476 161 55 132 chrX 53557361 53557761 -113092535 - ORR1D1 LTR MaLR -5 369 1 1 993 180 0 0 0 chrX 53557777 53557797 -113092499 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1 993 405 39 0 0 chrX 53557797 53557848 -113092448 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 993 470 209 162 0 chrX 53557849 53557954 -113092342 - B1_Mm SINE Alu -5 142 21 1 993 736 267 29 33 chrX 53557961 53558201 -113092095 - ORR1D2 LTR MaLR -131 239 1 1 993 252 0 0 0 chrX 53558276 53558304 -113091992 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 993 189 0 0 0 chrX 53558351 53558372 -113091924 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 993 568 251 84 105 chrX 53558703 53558894 -113091402 + B3A SINE B2 8 194 -1 1 993 762 210 0 40 chrX 53559474 53559623 -113090673 + B1_Mur1 SINE Alu 2 144 -5 1 993 938 163 0 11 chrX 53559624 53559804 -113090492 + GA-rich Low_complexity Low_complexity 1 178 0 1 993 225 0 0 0 chrX 53559806 53559831 -113090465 + (GGAA)n Simple_repeat Simple_repeat 1 25 0 1 993 3007 21 0 0 chrX 53559831 53560167 -113090129 + IAPLTR1a_Mm LTR ERVK 1 336 -1 1 993 666 0 0 0 chrX 53560167 53560241 -113090055 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 1 993 701 191 16 0 chrX 53561297 53561423 -113088873 + B3 SINE B2 3 130 -86 1 993 332 308 0 9 chrX 53561681 53561786 -113088510 - RMER12 LTR ERVK -473 849 746 1 993 232 208 19 0 chrX 53561802 53561855 -113088441 + (CATA)n Simple_repeat Simple_repeat 2 55 0 1 993 264 256 300 35 chrX 53562304 53562474 -113087822 - B3 SINE B2 0 216 2 1 993 336 309 0 10 chrX 53562490 53562588 -113087708 - PB1D10 SINE Alu -17 100 4 1 993 278 281 0 0 chrX 53562619 53562683 -113087613 - ORR1E LTR MaLR -295 64 1 1 993 233 273 30 0 chrX 53562786 53562852 -113087444 + Charlie4z DNA MER1_type 66 133 -34 1 993 639 154 27 0 chrX 53563692 53563802 -113086494 + B1_Mur3 SINE Alu 24 136 -13 1 993 486 0 0 0 chrX 53563803 53563857 -113086439 + (CAAAA)n Simple_repeat Simple_repeat 4 57 0 1 993 1199 55 0 0 chrX 53563876 53564022 -113086274 + B1_Mus1 SINE Alu 1 146 -2 1 993 729 220 0 21 chrX 53564638 53564782 -113085514 + B1_Mur4 SINE Alu 6 146 -4 1 993 249 33 0 0 chrX 53564782 53564812 -113085484 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1 993 1578 209 44 36 chrX 53564983 53565346 -113084950 + RMER1B Other Other 690 1055 -11 1 993 951 243 9 28 chrX 53565393 53565605 -113084691 - B3 SINE B2 -8 208 1 1 993 1163 62 14 0 chrX 53565888 53566033 -113084263 + B1_Mus1 SINE Alu 2 148 0 1 993 347 269 0 13 chrX 53566095 53566174 -113084122 - B1_Mus1 SINE Alu -68 80 3 1 993 234 318 22 43 chrX 53566174 53566187 -113084109 - B4 SINE B4 -126 166 77 1 993 372 293 35 21 chrX 53566287 53566430 -113083866 + B1_Mus2 SINE Alu 3 147 0 1 993 236 188 21 0 chrX 53566431 53566479 -113083817 + GA-rich Low_complexity Low_complexity 2 50 0 1 993 243 79 0 0 chrX 53567569 53567607 -113082689 + (CAAAAA)n Simple_repeat Simple_repeat 2 39 0 1 993 1418 68 5 30 chrX 53567817 53568015 -113082281 + B2_Mm2 SINE B2 2 194 -1 1 993 2686 82 0 0 chrX 53568345 53568712 -113081584 + MT2B2 LTR ERVL 1 367 -217 1 993 789 108 0 47 chrX 53568705 53568832 -113081464 + B1_Mur4 SINE Alu 22 142 -8 1 993 785 79 0 9 chrX 53568844 53568959 -113081337 + (GGAA)n Simple_repeat Simple_repeat 3 116 0 1 993 438 20 0 0 chrX 53569129 53569180 -113081116 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 1 993 1058 108 0 0 chrX 53569181 53569339 -113080957 - B2_Mm2 SINE B2 -37 158 1 1 993 7810 31 0 42 chrX 53569484 53570455 -113079841 - L1Md_F2 LINE L1 -12 6570 5641 1 993 771 152 80 0 chrX 53571271 53571409 -113078887 + B1_Mur4 SINE Alu 1 149 -1 1 993 1141 88 0 0 chrX 53571623 53571770 -113078526 + B1_Mm SINE Alu 1 147 0 1 993 252 0 0 0 chrX 53571770 53571798 -113078498 + (A)n Simple_repeat Simple_repeat 1 28 0 1 993 925 85 35 0 chrX 53572394 53572535 -113077761 + URR1A DNA MER1_type 81 226 0 1 993 874 224 106 11 chrX 53573046 53573321 -113076975 - L1MA4 LINE L1 -357 5943 5643 1 993 386 220 0 42 chrX 53573321 53573416 -113076880 - MER44B DNA MER2_type -373 177 87 1 993 21 57 0 0 chrX 53573873 53573908 -113076388 + AT_rich Low_complexity Low_complexity 1 35 0 1 993 894 201 37 11 chrX 53574705 53574896 -113075400 + B3 SINE B2 2 197 -19 1 993 1619 138 74 43 chrX 53574902 53575321 -113074975 + RMER17C LTR ERVK 20 439 -519 1 993 776 158 0 9 chrX 53575695 53575838 -113074458 - B1_Mur4 SINE Alu 0 150 10 1 993 378 57 0 0 chrX 53575838 53575891 -113074405 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 993 198 0 0 0 chrX 53576526 53576548 -113073748 + (T)n Simple_repeat Simple_repeat 1 22 0 1 993 1191 61 0 0 chrX 53576548 53576695 -113073601 - B1_Mus2 SINE Alu 0 147 1 1 993 1098 72 0 0 chrX 53576829 53576968 -113073328 + B1_Mus1 SINE Alu 2 140 -8 1 993 1397 70 43 0 chrX 53577018 53577204 -113073092 + B2_Mm2 SINE B2 1 194 -1 1 993 25 0 0 0 chrX 53577246 53577271 -113073025 + AT_rich Low_complexity Low_complexity 1 25 0 1 993 476 135 247 10 chrX 53577278 53577375 -113072921 - B1_Mus1 SINE Alu 0 120 1 1 993 562 324 52 20 chrX 53577375 53577624 -113072672 + MLT1A0 LTR MaLR 105 361 -4 1 993 493 319 39 69 chrX 53577718 53577950 -113072346 + MER76 LTR ERVL 89 313 -378 1 993 2547 108 85 33 chrX 53578030 53578206 -113072090 - BGLII_A LTR ERVK 0 445 271 1 993 474 18 0 0 chrX 53578206 53578261 -113072035 + (TTCC)n Simple_repeat Simple_repeat 2 56 0 1 993 2547 108 85 33 chrX 53578261 53578507 -113071789 - BGLII_A LTR ERVK -175 270 2 1 993 3100 68 2 8 chrX 53578654 53579052 -113071244 + MTA_Mm LTR MaLR 1 396 0 1 993 2589 134 21 0 chrX 53579056 53579486 -113070810 + MTA_Mm-int LTR MaLR 14 452 -1511 1 993 1655 167 85 26 chrX 53579486 53579873 -113070423 - RMER17C LTR ERVK 0 410 1 1 993 618 142 0 17 chrX 53579873 53579988 -113070308 + MTA_Mm-int LTR MaLR 448 560 -1403 1 993 654 146 0 128 chrX 53579981 53580130 -113070166 + MT2B LTR ERVL 157 286 -315 1 993 2413 143 11 0 chrX 53580090 53580536 -113069760 + MTA_Mm-int LTR MaLR 718 1168 -795 1 993 3096 101 9 2 chrX 53580536 53581040 -113069256 + RLTR1C LTR ERV1 1 605 0 1 993 2209 111 93 104 chrX 53581040 53581687 -113068609 + MTB_Mm-int LTR MaLR 533 1538 -425 1 993 823 78 212 73 chrX 53581687 53581852 -113068444 - B2_Mm2 SINE B2 -7 188 1 1 993 1291 152 97 278 chrX 53581852 53582007 -113068289 + MTB_Mm-int LTR MaLR 960 1097 -1 1 993 2778 80 2 13 chrX 53582007 53582400 -113067896 + MTB_Mm LTR MaLR 1 389 -18 1 993 394 300 154 0 chrX 53582523 53582653 -113067643 - RSINE1 SINE B4 -14 151 2 1 993 1007 143 42 42 chrX 53583602 53583792 -113066504 - B2_Mm2 SINE B2 -5 190 1 1 993 999 134 209 0 chrX 53584842 53585029 -113065267 - URR1A DNA MER1_type 0 226 1 1 993 366 317 29 29 chrX 53585586 53585758 -113064538 + L1MDb LINE L1 888 1059 -5481 1 993 378 221 47 123 chrX 53585758 53585928 -113064368 + B4 SINE B4 67 223 -69 1 993 836 139 7 0 chrX 53585792 53585929 -113064367 + B1_Mus2 SINE Alu 9 146 -1 1 993 556 304 38 106 chrX 53585939 53586141 -113064155 + L1MDb LINE L1 1104 1298 -5242 1 993 624 163 145 15 chrX 53586141 53586272 -113064024 + B1_Mus1 SINE Alu 1 148 0 1 993 556 304 38 106 chrX 53586272 53586543 -113063753 + L1MDb LINE L1 1299 1545 -4995 1 993 538 298 57 0 chrX 53586659 53586800 -113063496 - RSINE1 SINE B4 -15 150 2 1 993 194 127 14 87 chrX 53586832 53586901 -113063395 + (GTGTG)n Simple_repeat Simple_repeat 1 64 0 1 993 364 119 57 40 chrX 53586896 53587071 -113063225 + (TG)n Simple_repeat Simple_repeat 2 179 0 1 993 218 200 125 62 chrX 53587156 53587236 -113063060 - B2_Mm2 SINE B2 -107 88 4 1 993 523 294 48 14 chrX 53587415 53587689 -113062607 + L1MDb LINE L1 1719 2008 -4625 1 993 265 76 76 0 chrX 53587995 53588061 -113062235 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 993 459 112 67 24 chrX 53588083 53588248 -113062048 + (CA)n Simple_repeat Simple_repeat 1 172 0 1 993 243 78 39 19 chrX 53588287 53588339 -113061957 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 993 3468 28 0 10 chrX 53588378 53588776 -113061520 + MTA_Mm LTR MaLR 3 396 0 1 993 640 111 46 17 chrX 53588805 53588979 -113061317 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 993 615 132 42 26 chrX 53588993 53589435 -113060861 + (CA)n Simple_repeat Simple_repeat 1 449 0 1 993 4221 138 53 45 chrX 53589435 53590317 -113059979 - RMER17D LTR ERVK 0 889 1 1 993 224 197 29 29 chrX 53590317 53590366 -113059930 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 993 409 147 70 0 chrX 53590377 53590533 -113059763 + (CA)n Simple_repeat Simple_repeat 1 167 0 1 993 350 373 78 25 chrX 53590533 53590775 -113059521 - MLT2B3 LTR ERVL -71 483 229 1 993 255 297 13 39 chrX 53590869 53591023 -113059273 + L1MDb LINE L1 5028 5177 -1360 1 993 357 264 30 84 chrX 53591167 53591207 -113059089 + L1MDb LINE L1 5489 5528 -1009 1 993 895 154 0 27 chrX 53591207 53591354 -113058942 - B1_Mur4 SINE Alu -6 144 2 1 993 357 264 30 84 chrX 53591354 53591516 -113058780 + L1MDb LINE L1 5529 5680 -857 1 993 478 268 8 0 chrX 53591618 53591741 -113058555 + B1_Mur1 SINE Alu 25 148 -1 1 993 500 312 5 5 chrX 53591741 53591928 -113058368 + L1MDb LINE L1 5817 6003 -630 1 993 233 167 0 0 chrX 53591931 53591973 -113058323 - PB1D9 SINE Alu -6 114 73 1 993 743 279 116 40 chrX 53592017 53592346 -113057950 + MLT2C1 LTR ERVL 3 356 -41 1 993 471 87 0 0 chrX 53592419 53592488 -113057808 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 993 305 203 16 0 chrX 53592534 53592598 -113057698 + ERVL-B4-int LTR ERVL 2 66 -5648 1 993 743 318 54 18 chrX 53592611 53592944 -113057352 + ERVL-B4-int LTR ERVL 114 458 -5256 1 993 452 288 0 9 chrX 53592959 53593071 -113057225 + ERVL-B4-int LTR ERVL 565 675 -5082 1 993 234 116 0 0 chrX 53593075 53593118 -113057178 + (A)n Simple_repeat Simple_repeat 1 43 0 1 993 511 208 0 77 chrX 53593136 53593266 -113057030 + B1_Mur4 SINE Alu 19 138 -12 2 993 222 62 0 0 chrX 53593269 53593301 -113056995 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 2 993 578 287 104 12 chrX 53593335 53593575 -113056721 + ERVL-B4-int LTR ERVL 756 1017 -4697 1 993 651 232 112 31 chrX 53593579 53593775 -113056521 + B3 SINE B2 5 216 0 2 993 272 216 53 13 chrX 53593800 53593875 -113056421 - Lx9 LINE L1 -11 7633 7556 2 993 1607 57 0 0 chrX 53593877 53594069 -113056227 - B2_Mm1t SINE B2 -1 192 1 2 993 21 0 0 0 chrX 53594119 53594140 -113056156 + AT_rich Low_complexity Low_complexity 1 21 0 2 993 469 209 18 9 chrX 53594167 53594278 -113056018 + ERVL-B4-int LTR ERVL 1011 1122 -4592 1 993 1416 87 5 5 chrX 53594286 53594472 -113055824 + B2_Mm2 SINE B2 2 187 -8 2 993 221 246 76 15 chrX 53594474 53594540 -113055756 + ID4 SINE ID 4 73 -10 2 993 288 316 86 0 chrX 53594614 53594731 -113055565 + ERVL-B4-int LTR ERVL 1133 1259 -4455 1 993 1478 304 34 44 chrX 53594969 53595214 -113055082 + ERVL-B4-int LTR ERVL 2091 2342 -3372 1 993 239 0 32 0 chrX 53595214 53595245 -113055051 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 993 1118 45 0 0 chrX 53595245 53595379 -113054917 - B1_Mus1 SINE Alu -13 135 2 2 993 1478 304 34 44 chrX 53595379 53595726 -113054570 + ERVL-B4-int LTR ERVL 2343 2677 -3037 1 993 1334 89 21 10 chrX 53595758 53595950 -113054346 - B2_Mm2 SINE B2 -1 194 1 2 993 230 156 67 0 chrX 53595952 53595997 -113054299 - Lx8 LINE L1 -10 7463 7416 2 993 1123 245 47 18 chrX 53596020 53596294 -113054002 - Lx8 LINE L1 -121 7352 7071 2 993 276 312 0 0 chrX 53596630 53596694 -113053602 + B1F2 SINE Alu 1 64 -85 2 993 1230 41 0 0 chrX 53596730 53596877 -113053419 + B1_Mus2 SINE Alu 1 147 0 2 993 314 0 0 47 chrX 53596879 53596922 -113053374 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2 993 1084 83 14 0 chrX 53597033 53597177 -113053119 + B1_Mus1 SINE Alu 1 146 -2 2 993 41 21 0 0 chrX 53597183 53597231 -113053065 + AT_rich Low_complexity Low_complexity 1 48 0 2 993 545 53 0 0 chrX 53597379 53597455 -113052841 + BC1_Mm scRNA scRNA 1 76 -76 2 993 22 0 0 0 chrX 53598333 53598355 -113051941 + AT_rich Low_complexity Low_complexity 1 22 0 2 993 26 0 0 0 chrX 53599144 53599170 -113051126 + AT_rich Low_complexity Low_complexity 1 26 0 2 993 292 171 76 38 chrX 53600641 53600720 -113049576 + RLTR25B LTR ERVK 428 509 -519 2 993 803 38 0 0 chrX 53600658 53600763 -113049533 + B1_Mus2 SINE Alu 43 147 0 2 993 237 310 41 41 chrX 53601206 53601327 -113048969 + Charlie4z DNA MER1_type 12 132 -35 2 993 3403 164 70 61 chrX 53603204 53603894 -113046402 - Lx5 LINE L1 -3 7047 6352 2 993 916 79 0 0 chrX 53603933 53604059 -113046237 - B1_Mus1 SINE Alu -21 127 2 2 993 6821 156 36 34 chrX 53604060 53605052 -113045244 - Lx5 LINE L1 -688 6362 5350 2 993 1237 54 0 0 chrX 53605052 53605199 -113045097 - B1_Mus1 SINE Alu 0 148 2 2 993 6821 139 21 55 chrX 53605199 53605228 -113045068 - L1_Mur2 LINE L1 -528 5349 5349 2 993 2724 127 12 63 chrX 53605228 53605707 -113044589 - Lx3C LINE L1 -4 6972 6518 2 993 6821 139 21 55 chrX 53605707 53606318 -113043978 - Lx5 LINE L1 -528 5349 4729 2 993 1139 68 0 20 chrX 53607262 53607399 -113042897 + B1_Mus1 SINE Alu 1 137 -11 2 993 207 0 0 0 chrX 53607399 53607422 -113042874 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2 993 1139 68 0 20 chrX 53607422 53607434 -113042862 + B1_Mus1 SINE Alu 138 147 -1 2 994 360 0 0 0 chrX 53608531 53608571 -113041725 + (TAGA)n Simple_repeat Simple_repeat 3 42 0 2 994 472 224 172 11 chrX 53608880 53609111 -113041185 - MLT1F1 LTR MaLR -240 308 70 2 994 1285 292 95 41 chrX 53609448 53610077 -113040219 - L1MEf LINE L1 -1559 5447 4785 2 994 817 51 17 0 chrX 53610192 53610310 -113039986 + B1_Mus1 SINE Alu 29 148 0 2 994 397 240 158 0 chrX 53610428 53610624 -113039672 - L1MEf LINE L1 -4041 3293 3067 2 994 467 276 65 13 chrX 53610712 53610943 -113039353 - L1MEf LINE L1 -4432 2902 2660 2 994 491 283 83 40 chrX 53610956 53611311 -113038985 - L1MEf LINE L1 -4489 2519 2142 2 994 323 376 0 0 chrX 53611445 53611530 -113038766 - RSINE1 SINE B4 -79 86 2 2 994 294 157 0 0 chrX 53611530 53611576 -113038720 + B1_Mur4 SINE Alu 104 149 -1 2 994 578 244 8 0 chrX 53611632 53611751 -113038545 - B1F SINE Alu -29 120 1 2 994 311 322 82 43 chrX 53611752 53611965 -113038331 - L1M2 LINE L1 -774 5369 5161 2 994 180 0 0 0 chrX 53611965 53611985 -113038311 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2 994 311 322 82 43 chrX 53611985 53612147 -113038149 - L1M2 LINE L1 -983 5160 4979 2 994 678 294 17 11 chrX 53612173 53612466 -113037830 - L1M2 LINE L1 -1441 4699 4402 2 994 247 241 47 35 chrX 53612474 53612560 -113037736 - B3A SINE B2 0 198 112 2 994 517 261 97 36 chrX 53612614 53612892 -113037404 - L1M2 LINE L1 -1762 4381 4087 2 994 5404 140 22 2 chrX 53613263 53614143 -113036153 - Lx4B LINE L1 -17 7041 6145 2 994 240 281 144 10 chrX 53614566 53614670 -113035626 - PB1D7 SINE Alu -1 119 2 2 994 336 295 27 27 chrX 53616199 53616402 -113033894 + MMSAT4 Satellite Satellite 1 203 0 2 994 425 290 22 22 chrX 53616433 53616744 -113033552 + MMSAT4 Satellite Satellite 1 311 0 2 994 274 296 82 27 chrX 53617665 53617811 -113032485 - MER103 DNA DNA -11 155 2 2 994 324 48 0 0 chrX 53618179 53618221 -113032075 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 994 1197 119 11 0 chrX 53618888 53619065 -113031231 + B2_Mm1t SINE B2 1 179 -14 2 994 248 218 0 18 chrX 53619121 53619177 -113031119 + B2_Mm2 SINE B2 47 101 -94 2 994 1222 48 7 0 chrX 53620021 53620168 -113030128 - B1_Mus1 SINE Alu 0 148 1 2 994 621 216 0 0 chrX 53621169 53621456 -113028840 + (CA)n Simple_repeat Simple_repeat 1 287 0 2 994 596 212 0 2 chrX 53621502 53622022 -113028274 + (CA)n Simple_repeat Simple_repeat 1 518 0 2 994 342 0 0 0 chrX 53622177 53622215 -113028081 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 2 994 799 134 51 22 chrX 53622215 53622352 -113027944 - B1_Mur4 SINE Alu -8 142 2 2 994 339 335 56 34 chrX 53622372 53622551 -113027745 + MLT1G LTR MaLR 1 183 -372 2 994 360 264 99 0 chrX 53622754 53622875 -113027421 + L1M4b LINE L1 1260 1392 -5942 2 994 1405 71 38 0 chrX 53622890 53623074 -113027222 + B2_Mm2 SINE B2 2 192 -3 2 994 491 69 0 0 chrX 53623076 53623148 -113027148 + B1_Mm SINE Alu 76 147 0 2 994 612 134 36 0 chrX 53623155 53623267 -113027029 + B2_Mm2 SINE B2 71 186 -9 2 994 468 343 62 50 chrX 53623267 53623703 -113026593 + L1M4 LINE L1 18 458 -6084 2 994 439 239 128 0 chrX 53623869 53623978 -113026318 - B1F SINE Alu -19 130 8 2 994 223 276 0 17 chrX 53623931 53623990 -113026306 - B4 SINE B4 -153 139 82 2 994 703 188 14 50 chrX 53624049 53624189 -113026107 - B1_Mur3 SINE Alu -14 135 1 2 994 262 259 22 183 chrX 53624402 53624582 -113025714 + B3A SINE B2 1 151 -47 2 994 408 40 0 0 chrX 53624585 53624635 -113025661 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 994 318 239 109 0 chrX 53624905 53624997 -113025299 + L1M4b LINE L1 4982 5083 -1923 2 994 226 269 97 0 chrX 53625062 53625155 -113025141 + B4A SINE B4 3 104 -188 2 994 987 71 14 0 chrX 53625273 53625413 -113024883 - B1_Mm SINE Alu 0 147 6 2 994 481 213 51 108 chrX 53625276 53625434 -113024862 - B4 SINE B4 -69 223 75 2 994 466 269 0 9 chrX 53625410 53625519 -113024777 - B1_Mur1 SINE Alu -39 110 3 2 994 531 237 61 8 chrX 53625519 53625650 -113024646 + B4 SINE B4 95 232 -60 2 994 803 277 62 36 chrX 53625739 53626159 -113024137 + L1MD LINE L1 4306 4736 -1410 2 994 288 250 0 0 chrX 53626203 53626271 -113024025 - Tigger5 DNA MER2_type -37 2369 2302 2 994 1329 132 122 20 chrX 53626504 53626758 -113023538 + Lx LINE L1 6375 6654 0 2 994 693 214 123 9 chrX 53626905 53627117 -113023179 + L1MA5 LINE L1 6042 6277 -23 2 994 21 57 0 0 chrX 53628148 53628183 -113022113 + GC_rich Low_complexity Low_complexity 1 35 0 2 994 300 53 0 0 chrX 53629319 53629357 -113020939 + (GAA)n Simple_repeat Simple_repeat 3 40 0 2 994 804 175 15 0 chrX 53631500 53631637 -113018659 + B1_Mus1 SINE Alu 2 140 -8 2 994 300 137 0 0 chrX 53633002 53633053 -113017243 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 2 994 767 133 7 22 chrX 53633334 53633472 -113016824 + B1_Mur4 SINE Alu 15 150 0 2 994 192 152 0 0 chrX 53633781 53633814 -113016482 + T-rich Low_complexity Low_complexity 1 33 0 2 994 894 96 72 29 chrX 53633815 53633954 -113016342 - B1_Mus1 SINE Alu -2 146 2 2 994 1639 31 0 20 chrX 53634364 53634560 -113015736 - B2_Mm1t SINE B2 0 193 2 2 994 4159 148 74 52 chrX 53635020 53636182 -113014114 - RMER17B LTR ERVK 0 958 1 2 994 661 144 144 42 chrX 53636189 53636356 -113013940 - RMER17C LTR ERVK -226 184 1 2 994 2596 112 71 22 chrX 53636361 53636698 -113013598 - RMER17C-int LTR ERVK -2 3236 2896 2 994 306 73 0 0 chrX 53636698 53636739 -113013557 + (TA)n Simple_repeat Simple_repeat 1 41 0 2 994 2596 118 251 26 chrX 53636739 53637026 -113013270 - RMER17C-int LTR ERVK -343 2895 2532 2 994 3478 160 159 63 chrX 53637014 53637897 -113012399 - RMER17C-int LTR ERVK -879 2359 1393 2 994 389 22 0 0 chrX 53639120 53639166 -113011130 - L1_Mus3 LINE L1 -580 6058 6013 2 994 4357 64 41 3 chrX 53639166 53639748 -113010548 + L1_Mus3 LINE L1 6029 6632 -6 2 994 454 167 54 32 chrX 53639907 53640000 -113010296 + Lx8 LINE L1 7186 7280 -193 2 994 740 174 50 14 chrX 53640081 53640221 -113010075 + B1_Mus1 SINE Alu 1 145 -3 2 994 394 257 30 0 chrX 53640628 53640729 -113009567 - PB1D7 SINE Alu 0 120 17 2 994 235 331 58 27 chrX 53640762 53641023 -113009273 + L1MA4 LINE L1 2328 2596 -4253 2 994 325 282 60 20 chrX 53641156 53641355 -113008941 + L1MA4 LINE L1 2865 3071 -3774 2 994 192 77 0 0 chrX 53641355 53641381 -113008915 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 994 607 289 152 14 chrX 53641401 53641815 -113008481 + L1MA4 LINE L1 3183 3653 -3192 2 994 865 161 198 17 chrX 53641822 53641999 -113008297 + B3 SINE B2 2 210 -6 2 994 244 276 49 62 chrX 53642036 53642117 -113008179 + RSINE1 SINE B4 4 83 -82 2 994 479 226 93 29 chrX 53642117 53642322 -113007974 + L1MA4 LINE L1 5842 6059 -786 2 994 534 215 39 83 chrX 53642337 53642358 -113007938 + B4 SINE B4 75 157 -135 2 994 1014 51 0 0 chrX 53642358 53642496 -113007800 + B1_Mus1 SINE Alu 11 148 0 2 994 534 215 39 83 chrX 53642496 53642516 -113007780 + B4 SINE B4 158 248 -44 2 994 464 229 0 56 chrX 53642537 53642662 -113007634 + PB1D9 SINE Alu 2 119 -1 2 994 1428 279 25 19 chrX 53642677 53643155 -113007141 + L1MA4 LINE L1 6111 6591 -411 2 994 243 228 0 34 chrX 53643228 53643287 -113007009 + L1MA4 LINE L1 6576 6632 -370 2 994 250 196 0 0 chrX 53643718 53643764 -113006532 + ORR1D-int LTR MaLR 292 337 -1033 2 994 349 239 108 38 chrX 53643769 53643949 -113006347 + RLTR18B LTR ERVK 1 206 -306 2 994 302 336 97 23 chrX 53644013 53644229 -113006067 + RLTR18B LTR ERVK 124 355 -157 2 994 1353 169 56 26 chrX 53644318 53644622 -113005674 + ORR1D-int LTR MaLR 342 654 -716 2 994 363 208 122 8 chrX 53645010 53645141 -113005155 - Lx9 LINE L1 -20 7624 7479 2 994 1058 191 162 153 chrX 53645441 53645899 -113004397 + MT2A LTR ERVL 1 462 -71 2 994 441 0 0 0 chrX 53645900 53645949 -113004347 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 994 692 231 35 14 chrX 53646304 53646449 -113003847 + B1_Mus1 SINE Alu 1 148 0 2 994 430 117 319 18 chrX 53646476 53646589 -113003707 - B2_Mm2 SINE B2 -2 193 47 2 994 1356 80 11 0 chrX 53646640 53646816 -113003480 - B2_Mm1t SINE B2 -14 179 2 3 994 261 0 0 0 chrX 53647277 53647306 -113002990 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 994 380 257 212 14 chrX 53647768 53647914 -113002382 + ID_B1 SINE B4 7 181 -43 3 994 638 254 55 0 chrX 53648603 53648784 -113001512 - B4 SINE B4 -101 191 1 3 994 2386 198 16 29 chrX 53649661 53650146 -113000150 + Lx7 LINE L1 6849 7327 -369 3 994 1614 175 32 38 chrX 53650224 53650568 -112999728 + Lx7 LINE L1 7355 7696 0 3 994 1177 92 92 0 chrX 53650584 53650758 -112999538 + B2_Mm2 SINE B2 1 190 -5 3 994 691 174 0 40 chrX 53650777 53650903 -112999393 + B3 SINE B2 1 121 -95 3 994 237 133 0 0 chrX 53650931 53650956 -112999340 + (A)n Simple_repeat Simple_repeat 1 25 0 3 994 1650 31 11 0 chrX 53650956 53651147 -112999149 + B2_Mm1a SINE B2 1 193 0 3 994 237 133 0 0 chrX 53651147 53651166 -112999130 + (A)n Simple_repeat Simple_repeat 1 19 0 3 994 207 0 0 0 chrX 53651592 53651615 -112998681 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 994 250 350 78 17 chrX 53651783 53652013 -112998283 + L1M3c LINE L1 187 430 -5711 3 994 362 264 86 25 chrX 53652124 53652310 -112997986 + L1MA9 LINE L1 6027 6225 -87 3 994 417 90 0 0 chrX 53652310 53652377 -112997919 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 994 1184 55 0 7 chrX 53652532 53652679 -112997617 - B1_Mus1 SINE Alu -1 147 2 3 994 1145 121 141 0 chrX 53653302 53653500 -112996796 - URR1A DNA MER1_type 0 226 1 3 994 299 291 28 46 chrX 53653565 53653673 -112996623 + PB1 SINE Alu 22 127 0 3 994 845 175 0 0 chrX 53653676 53653813 -112996483 + B1_Mur4 SINE Alu 1 137 -13 3 994 192 135 0 0 chrX 53653864 53653901 -112996395 + (T)n Simple_repeat Simple_repeat 1 37 0 3 994 411 194 0 245 chrX 53653950 53654134 -112996162 + B1_Mur4 SINE Alu 9 148 -2 3 994 1040 191 34 8 chrX 53654488 53654726 -112995570 - RLTR18B LTR ERVK -44 468 225 3 994 250 104 20 40 chrX 53654725 53654775 -112995521 - RLTR18B LTR ERVK -245 267 219 3 994 577 170 28 9 chrX 53654805 53654912 -112995384 - RLTR18B LTR ERVK -403 109 1 3 994 202 294 56 42 chrX 53655373 53655515 -112994781 - L2 LINE L2 -438 2981 2838 3 994 21 36 0 0 chrX 53655584 53655612 -112994684 + AT_rich Low_complexity Low_complexity 1 28 0 3 994 309 118 0 0 chrX 53656604 53656655 -112993641 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 994 242 114 48 48 chrX 53656659 53656742 -112993554 + (CAGAGA)n Simple_repeat Simple_repeat 4 86 0 3 994 225 0 0 0 chrX 53657178 53657203 -112993093 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 994 798 299 42 0 chrX 53657205 53657422 -112992874 + B4 SINE B4 67 292 0 3 994 595 81 23 0 chrX 53657642 53657729 -112992567 - B1_Mus2 SINE Alu -17 130 42 3 994 393 269 21 71 chrX 53657756 53657896 -112992400 - B4 SINE B4 -152 140 8 3 994 772 176 135 21 chrX 53658172 53658278 -112992018 - Lx7 LINE L1 0 7696 7578 3 994 466 16 32 0 chrX 53658278 53658341 -112991955 + (TC)n Simple_repeat Simple_repeat 1 65 0 3 994 772 176 135 21 chrX 53658341 53658426 -112991870 - Lx7 LINE L1 -119 7577 7483 3 994 186 167 0 0 chrX 53658448 53658484 -112991812 + CT-rich Low_complexity Low_complexity 1 36 0 3 994 559 254 70 53 chrX 53658977 53659092 -112991204 - ID_B1 SINE B4 -20 204 94 3 994 447 19 0 0 chrX 53659092 53659144 -112991152 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 994 559 254 70 53 chrX 53659144 53659215 -112991081 - ID_B1 SINE B4 -131 93 15 3 994 332 302 19 68 chrX 53659611 53659714 -112990582 - ORR1E LTR MaLR -248 111 14 3 994 226 154 0 55 chrX 53659715 53659770 -112990526 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 994 22 26 0 25 chrX 53659854 53659866 -112990430 + AT_rich Low_complexity Low_complexity 1 12 0 3 994 1060 196 25 0 chrX 53659866 53660065 -112990231 + B3 SINE B2 2 205 -11 3 994 22 26 0 25 chrX 53660065 53660092 -112990204 + AT_rich Low_complexity Low_complexity 1 27 0 3 994 1214 92 16 32 chrX 53660275 53660312 -112989984 - B2_Mm2 SINE B2 -8 187 153 3 994 3066 20 0 14 chrX 53660312 53660663 -112989633 - ORR1A0 LTR MaLR 0 346 1 3 994 1214 92 16 32 chrX 53660663 53660815 -112989481 - B2_Mm2 SINE B2 -43 152 1 3 994 255 304 0 0 chrX 53660890 53660969 -112989327 + MIRb SINE MIR 120 198 -70 3 994 1255 28 0 0 chrX 53661358 53661500 -112988796 + B1_Mm SINE Alu 2 143 -4 3 994 384 40 0 0 chrX 53661500 53661550 -112988746 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 3 994 330 49 0 0 chrX 53661710 53661751 -112988545 - L1_Mm LINE L1 -793 5090 5050 3 994 7476 41 0 0 chrX 53661751 53662629 -112987667 + L1Md_T LINE L1 5705 6582 0 3 994 384 289 99 26 chrX 53662714 53662906 -112987390 - L1M4 LINE L1 -5354 1188 983 3 994 224 232 89 0 chrX 53662962 53663018 -112987278 - B1F SINE Alu 0 149 89 3 994 1214 49 0 0 chrX 53663139 53663283 -112987013 + B1_Mus2 SINE Alu 2 145 -2 3 994 1172 128 16 11 chrX 53663287 53663476 -112986820 + B2_Mm1a SINE B2 1 190 -3 3 994 27642 29 0 0 chrX 53663476 53666704 -112983592 + L1Md_T LINE L1 2359 5586 -297 3 994 9159 6 0 0 chrX 53666704 53667700 -112982596 + L1Md_T LINE L1 5587 6582 0 3 994 385 202 78 39 chrX 53667710 53667813 -112982483 + B1_Mur1 SINE Alu 42 148 -1 3 994 612 149 50 42 chrX 53667886 53668005 -112982291 + RMER1C Other Other 1173 1292 -50 3 994 1623 164 66 30 chrX 53668072 53668085 -112982211 - RMER17C LTR ERVK 0 410 390 3 994 1260 56 0 0 chrX 53668085 53668246 -112982050 + (GAAA)n Simple_repeat Simple_repeat 1 161 0 3 994 1126 38 0 0 chrX 53668246 53668378 -112981918 + B1_Mus1 SINE Alu 2 133 -15 3 994 1623 164 66 30 chrX 53668378 53668759 -112981537 - RMER17C LTR ERVK -21 389 2 3 994 22 56 0 0 chrX 53668798 53668834 -112981462 + AT_rich Low_complexity Low_complexity 1 36 0 3 994 347 179 0 9 chrX 53668834 53668864 -112981432 + polypyrimidine Low_complexity Low_complexity 77 106 0 3 994 1350 110 351 3 chrX 53668864 53669166 -112981130 - RMER17C LTR ERVK -3 407 1 3 994 347 179 0 9 chrX 53669166 53669242 -112981054 + CT-rich Low_complexity Low_complexity 1 76 0 3 994 423 0 0 0 chrX 53669242 53669289 -112981007 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 994 432 269 62 34 chrX 53669291 53669437 -112980859 - B3A SINE B2 -27 171 22 3 994 282 268 50 30 chrX 53670370 53670470 -112979826 + RMER15-int LTR ERVL 546 647 -4352 3 994 548 258 138 0 chrX 53670863 53671022 -112979274 - B3A SINE B2 -16 182 2 3 994 553 279 73 15 chrX 53671025 53671229 -112979067 - B3 SINE B2 0 216 1 3 994 1636 47 0 0 chrX 53671304 53671496 -112978800 - B2_Mm1a SINE B2 0 193 2 3 994 721 133 15 7 chrX 53671638 53671774 -112978522 + Lx LINE L1 6518 6654 0 3 994 180 0 0 0 chrX 53671910 53671930 -112978366 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 3 994 327 109 0 18 chrX 53671951 53672007 -112978289 - B2_Mm2 SINE B2 -94 101 47 3 994 1364 79 23 0 chrX 53672039 53672216 -112978080 - B2_Mm2 SINE B2 -14 181 1 3 994 1079 63 0 90 chrX 53672297 53672453 -112977843 - B1_Mus1 SINE Alu -6 142 1 3 994 268 147 42 42 chrX 53673613 53673684 -112976612 + Lx8 LINE L1 6982 7052 -421 3 994 249 258 0 0 chrX 53674133 53674199 -112976097 - ID_B1 SINE B4 -1 223 158 3 994 264 283 102 42 chrX 53674198 53674316 -112975980 + MER45B DNA Tip100 499 623 -417 3 994 480 300 83 36 chrX 53674397 53674649 -112975647 + MER45B DNA Tip100 776 1039 -1 3 994 930 263 30 4 chrX 53675111 53675382 -112974914 - MTEb LTR MaLR 0 379 102 3 994 814 145 14 0 chrX 53675379 53675524 -112974772 - URR1B DNA MER1_type -6 219 73 3 994 1190 61 0 0 chrX 53675533 53675680 -112974616 + B1_Mus1 SINE Alu 2 148 0 3 994 389 146 85 0 chrX 53675686 53675768 -112974528 - MTEb LTR MaLR -290 89 1 3 994 494 343 24 10 chrX 53676084 53676290 -112974006 + MER20 DNA MER1_type 1 209 -10 3 994 695 203 0 0 chrX 53676509 53676637 -112973659 - B1_Mur3 SINE Alu -20 129 2 3 994 627 257 14 0 chrX 53676660 53676800 -112973496 - B1_Mur1 SINE Alu -6 143 2 3 994 1117 43 57 0 chrX 53677096 53677236 -112973060 + B1_Mus1 SINE Alu 1 148 0 3 994 392 0 0 20 chrX 53677240 53677289 -112973007 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 3 994 369 0 0 0 chrX 53677493 53677534 -112972762 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 994 455 308 34 5 chrX 53677537 53677746 -112972550 + L1MA4 LINE L1 5277 5491 -809 3 994 477 145 118 0 chrX 53677746 53677842 -112972454 + B1_Mur4 SINE Alu 21 128 -21 3 994 1154 46 0 44 chrX 53677864 53678046 -112972250 + (GGGAGA)n Simple_repeat Simple_repeat 1 174 0 3 994 183 42 0 0 chrX 53678047 53678071 -112972225 + (GAGAA)n Simple_repeat Simple_repeat 1 24 0 3 994 441 278 20 36 chrX 53678147 53678319 -112971977 + L1MA4 LINE L1 5592 5799 -498 3 994 444 286 32 24 chrX 53678409 53678599 -112971697 + L1MA4 LINE L1 5776 5972 -199 3 994 226 180 20 20 chrX 53678778 53678829 -112971467 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 994 269 198 27 9 chrX 53678892 53679004 -112971292 + (CA)n Simple_repeat Simple_repeat 2 115 0 3 994 21 0 0 0 chrX 53679038 53679059 -112971237 + AT_rich Low_complexity Low_complexity 1 21 0 3 994 294 200 14 0 chrX 53679077 53679147 -112971149 + B3 SINE B2 146 216 0 3 994 690 215 56 56 chrX 53679159 53679356 -112970940 + B3A SINE B2 2 198 0 3 994 708 207 37 0 chrX 53679364 53679499 -112970797 + B1_Mus1 SINE Alu 3 142 -6 3 994 873 28 0 0 chrX 53679501 53679609 -112970687 + (GAAA)n Simple_repeat Simple_repeat 1 108 0 3 994 200 86 0 28 chrX 53679633 53679669 -112970627 + (TAA)n Simple_repeat Simple_repeat 2 36 0 3 994 1356 74 15 41 chrX 53679751 53679947 -112970349 + B2_Mm2 SINE B2 1 191 -4 3 994 545 196 63 2 chrX 53680080 53680206 -112970090 + B1_Mur1 SINE Alu 13 144 -5 3 994 321 314 9 0 chrX 53681184 53681289 -112969007 + PB1D9 SINE Alu 8 113 -7 3 994 232 217 183 0 chrX 53681299 53681359 -112968937 + B3A SINE B2 1 71 -127 3 994 324 0 0 0 chrX 53681360 53681396 -112968900 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 994 280 75 0 0 chrX 53681411 53681451 -112968845 + B2_Mm2 SINE B2 1 40 -155 3 994 1183 41 7 0 chrX 53681452 53681597 -112968699 + B1_Mus2 SINE Alu 2 147 0 4 994 198 0 0 0 chrX 53681611 53681633 -112968663 + (A)n Simple_repeat Simple_repeat 1 22 0 4 994 915 71 96 13 chrX 53681633 53681789 -112968507 + B2_Mm2 SINE B2 27 195 0 3 994 234 0 0 0 chrX 53682093 53682119 -112968177 + (CTG)n Simple_repeat Simple_repeat 1 26 0 4 994 639 248 0 0 chrX 53682123 53682252 -112968044 - ID_B1 SINE B4 -14 210 82 4 994 382 282 8 8 chrX 53682277 53682402 -112967894 + MER2 DNA MER2_type 140 264 -81 4 994 22 0 0 0 chrX 53682441 53682463 -112967833 + AT_rich Low_complexity Low_complexity 1 22 0 4 994 590 268 29 7 chrX 53682527 53682666 -112967630 - B4A SINE B4 -3 289 148 4 994 257 317 99 0 chrX 53682702 53682803 -112967493 - L1M2 LINE L1 -672 5625 5515 4 994 761 242 123 46 chrX 53682918 53683268 -112967028 - L1M2 LINE L1 -1082 5061 4685 4 994 759 325 87 32 chrX 53683359 53683821 -112966475 + MLT1F LTR MaLR 5 484 -64 4 994 765 209 129 16 chrX 53683903 53684097 -112966199 - B3 SINE B2 0 216 1 4 994 1233 207 0 0 chrX 53684113 53684321 -112965975 - B3 SINE B2 -7 209 2 4 994 546 67 0 0 chrX 53684353 53684428 -112965868 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 4 994 200 186 0 44 chrX 53684462 53684507 -112965789 + GA-rich Low_complexity Low_complexity 2 44 0 4 994 550 283 21 11 chrX 53684549 53684735 -112965561 + L1ME2 LINE L1 5728 5915 -249 4 994 244 222 31 31 chrX 53684746 53684811 -112965485 + ID4 SINE ID 6 70 -13 4 994 486 0 0 0 chrX 53684820 53684874 -112965422 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 994 272 241 0 0 chrX 53685001 53685074 -112965222 + L1ME2 LINE L1 6057 6132 -32 4 994 328 305 148 4 chrX 53685335 53685598 -112964698 + L2 LINE L2 2743 3043 -376 4 994 305 114 0 0 chrX 53685746 53685790 -112964506 - B1_Mus1 SINE Alu -101 47 4 4 994 358 333 103 56 chrX 53685887 53685939 -112964357 - Lx9 LINE L1 -100 7373 7328 4 994 297 0 0 0 chrX 53685939 53685972 -112964324 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 994 439 323 74 8 chrX 53685972 53686158 -112964138 - Lx9 LINE L1 -221 7423 7131 4 994 1102 219 126 9 chrX 53686167 53686605 -112963691 + MT2A LTR ERVL 1 489 -44 4 994 280 131 0 0 chrX 53686666 53686727 -112963569 + MT2A LTR ERVL 472 532 -1 4 994 369 209 43 32 chrX 53686727 53686821 -112963475 - Lx9 LINE L1 -417 7227 7133 4 994 709 247 14 0 chrX 53686821 53686967 -112963329 - B1_Mur1 SINE Alu -1 148 1 4 994 242 196 157 26 chrX 53686982 53687097 -112963199 - L1MDa LINE L1 -796 5741 5612 4 994 318 322 0 0 chrX 53687098 53687185 -112963111 + (TG)n Simple_repeat Simple_repeat 1 87 0 4 994 705 290 70 47 chrX 53687226 53687671 -112962625 - L1MDa LINE L1 -2428 4109 3655 4 994 310 250 12 24 chrX 53687750 53687832 -112962464 - RSINE1 SINE B4 0 165 85 4 994 2575 133 64 12 chrX 53687913 53688317 -112961979 + Lx4A LINE L1 6630 7054 -4 4 994 1147 82 7 0 chrX 53688396 53688542 -112961754 - B1_Mus1 SINE Alu 0 148 2 4 994 207 0 0 0 chrX 53688551 53688574 -112961722 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 4 994 1100 266 57 60 chrX 53688582 53689095 -112961201 - L1MDa LINE L1 -3235 3302 2792 4 994 258 263 89 55 chrX 53689097 53689334 -112960962 - L1MDa LINE L1 -4134 2499 2255 4 994 229 329 12 35 chrX 53689363 53689448 -112960848 - ID2 SINE ID 0 83 1 4 994 824 236 161 15 chrX 53689448 53689784 -112960512 - L1MDa LINE L1 -4410 2223 1839 4 994 310 370 0 48 chrX 53689786 53689911 -112960385 + PB1 SINE Alu 4 122 -5 4 994 186 43 0 0 chrX 53690075 53690098 -112960198 + (TTA)n Simple_repeat Simple_repeat 2 24 0 4 994 819 164 0 0 chrX 53690108 53690236 -112960060 - B1_Mus2 SINE Alu -10 137 10 4 994 789 258 13 17 chrX 53690348 53690622 -112959674 + Lx7 LINE L1 5697 5976 -1668 4 994 3137 278 45 70 chrX 53691053 53692234 -112958062 + Lx8 LINE L1 6223 7373 -100 4 994 432 0 0 0 chrX 53692326 53692374 -112957922 + (AAATG)n Simple_repeat Simple_repeat 5 52 0 4 994 280 323 56 8 chrX 53692382 53692507 -112957789 + RSINE1 SINE B4 5 135 -30 4 994 985 258 0 27 chrX 53693014 53693233 -112957063 + B3 SINE B2 4 216 0 4 994 262 260 257 43 chrX 53693307 53693681 -112956615 + L1MB7 LINE L1 5689 6142 -42 4 994 235 260 67 27 chrX 53693681 53693756 -112956540 + ID4_ SINE ID 2 79 -4 4 994 234 159 0 0 chrX 53693772 53693816 -112956480 + L1MB7 LINE L1 6125 6168 -16 4 994 1239 252 31 17 chrX 53694000 53694367 -112955929 + Lx8 LINE L1 5576 5925 -375 4 994 262 264 67 33 chrX 53694469 53694559 -112955737 - Lx8 LINE L1 -223 7250 7158 4 994 471 277 0 26 chrX 53695021 53695173 -112955123 - B1F1 SINE Alu -1 148 1 4 994 352 285 79 0 chrX 53695897 53696062 -112954234 + L1M5 LINE L1 5312 5489 -635 4 994 275 243 88 53 chrX 53696164 53696277 -112954019 - RMER15 LTR ERVL -457 118 2 4 994 4852 223 38 24 chrX 53696300 53696571 -112953725 - Lx6 LINE L1 -616 6844 6479 4 994 2585 66 72 0 chrX 53696571 53696906 -112953390 + RLTR10D LTR ERVK 1 359 0 4 994 4852 220 40 21 chrX 53696906 53697678 -112952618 - Lx6 LINE L1 -880 6580 5794 4 994 793 94 17 8 chrX 53697678 53697796 -112952500 - PB1D9 SINE Alu 0 120 2 4 994 4852 189 28 99 chrX 53697796 53697906 -112952390 - Lx6 LINE L1 -1667 5793 5684 4 994 1002 93 0 0 chrX 53697936 53698076 -112952220 - B1_Mus1 SINE Alu -1 147 8 4 994 193 284 96 19 chrX 53698650 53698754 -112951542 + L2c LINE L2 3271 3382 -5 4 994 807 11 0 0 chrX 53698927 53699019 -112951277 + (TCTCC)n Simple_repeat Simple_repeat 2 93 0 4 994 297 0 0 0 chrX 53699023 53699056 -112951240 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 4 994 426 281 237 17 chrX 53699253 53699485 -112950811 - RMER15 LTR ERVL 0 575 293 4 994 546 231 153 5 chrX 53699692 53699888 -112950408 + RMER15 LTR ERVL 351 575 0 4 994 630 216 13 32 chrX 53701749 53701907 -112948389 + B3 SINE B2 62 216 0 4 994 236 184 0 0 chrX 53701916 53701965 -112948331 + L2a LINE L2 3375 3423 -3 4 994 3441 84 24 4 chrX 53702448 53702914 -112947382 - MT2C_Mm LTR ERVL 0 475 1 4 994 238 292 72 72 chrX 53702927 53703178 -112947118 + L2c LINE L2 3072 3322 -65 4 994 900 131 20 27 chrX 53703694 53703843 -112946453 + B1_Mur4 SINE Alu 2 149 -1 4 994 189 259 0 6 chrX 53704647 53704705 -112945591 - L2b LINE L2 -9 3417 3328 4 994 611 187 48 16 chrX 53705368 53705493 -112944803 - B3A SINE B2 -69 129 1 4 994 715 265 112 120 chrX 53705754 53706278 -112944018 + MLT1F2 LTR MaLR 10 560 0 4 994 681 208 28 94 chrX 53706349 53706561 -112943735 - B3A SINE B2 0 198 1 4 994 227 292 9 36 chrX 53709154 53709264 -112941032 + CT-rich Low_complexity Low_complexity 3 109 0 4 994 217 88 0 29 chrX 53710197 53710232 -112940064 + B1F SINE Alu 99 132 -17 4 994 613 256 0 21 chrX 53710544 53710684 -112939612 + B1_Mur1 SINE Alu 1 137 -12 4 994 420 20 0 0 chrX 53710684 53710733 -112939563 + (GAAA)n Simple_repeat Simple_repeat 2 50 0 4 994 717 12 0 0 chrX 53710736 53710818 -112939478 + (GGAAA)n Simple_repeat Simple_repeat 3 84 0 4 994 305 275 12 0 chrX 53710930 53711010 -112939286 - ID4 SINE ID 0 83 3 4 994 791 167 214 22 chrX 53711299 53711477 -112938819 - B3 SINE B2 -1 215 4 4 994 360 0 0 0 chrX 53712541 53712581 -112937715 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 994 25 0 0 0 chrX 53712835 53712860 -112937436 + AT_rich Low_complexity Low_complexity 1 25 0 4 994 672 118 225 8 chrX 53713211 53713331 -112936965 - B1_Mus1 SINE Alu -2 146 1 4 994 1100 95 0 0 chrX 53713357 53713504 -112936792 - B1_Mus1 SINE Alu 0 148 2 4 994 433 169 20 119 chrX 53713556 53713657 -112936639 - B1_Mur4 SINE Alu -33 117 27 4 994 246 61 0 0 chrX 53714065 53714098 -112936198 + B1F SINE Alu 3 35 -114 4 994 543 271 29 0 chrX 53714139 53714279 -112936017 + B1F SINE Alu 1 144 -5 4 994 210 167 0 0 chrX 53714282 53714318 -112935978 + A-rich Low_complexity Low_complexity 1 36 0 4 994 505 181 92 37 chrX 53714562 53714671 -112935625 - B1F1 SINE Alu 0 117 3 4 994 276 276 21 99 chrX 53714671 53714728 -112935568 - MT2B2 LTR ERVL -427 157 112 4 994 225 259 0 36 chrX 53714689 53714745 -112935551 - B1F1 SINE Alu -91 58 5 4 994 248 220 50 17 chrX 53714922 53714982 -112935314 - tRNA-Ala-GCY_ tRNA tRNA -11 64 3 4 994 216 0 0 0 chrX 53716229 53716253 -112934043 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 4 994 1141 37 0 0 chrX 53716253 53716387 -112933909 - B1_Mm SINE Alu -13 134 1 4 994 419 256 132 22 chrX 53716550 53716686 -112933610 - RSINE1 SINE B4 -4 161 11 4 994 384 200 0 0 chrX 53716832 53716922 -112933374 + (TG)n Simple_repeat Simple_repeat 1 90 0 4 994 385 294 0 35 chrX 53716923 53717036 -112933260 - PB1 SINE Alu -18 109 1 4 994 298 306 12 71 chrX 53718179 53718348 -112931948 - MIRb SINE MIR 0 268 110 4 994 206 118 0 0 chrX 53718446 53718480 -112931816 + (TTTTTG)n Simple_repeat Simple_repeat 4 37 0 4 994 1169 68 0 7 chrX 53718715 53718862 -112931434 - B1_Mus1 SINE Alu 0 148 3 4 994 598 111 10 0 chrX 53719201 53719300 -112930996 + URR1B DNA MER1_type 120 219 -6 4 994 393 305 6 58 chrX 53719497 53719671 -112930625 + RSINE1 SINE B4 1 165 0 4 994 1243 35 0 0 chrX 53719880 53720025 -112930271 - B1_Mus2 SINE Alu -2 145 1 4 994 1170 48 0 13 chrX 53720188 53720337 -112929959 + B1_Mus2 SINE Alu 1 147 0 4 994 333 149 0 0 chrX 53721407 53721474 -112928822 + (TC)n Simple_repeat Simple_repeat 2 68 0 4 994 258 56 0 0 chrX 53721474 53721510 -112928786 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 994 731 189 0 8 chrX 53721510 53721638 -112928658 - B1_Mur3 SINE Alu -18 131 5 4 994 391 309 7 22 chrX 53721779 53721918 -112928378 + MIR3 SINE MIR 43 179 -29 4 994 387 227 65 37 chrX 53722422 53722532 -112927764 + PB1D10 SINE Alu 3 127 0 4 994 305 100 37 24 chrX 53722532 53722614 -112927682 + A-rich Low_complexity Low_complexity 6 88 0 4 994 714 312 5 21 chrX 53722671 53722864 -112927432 - B3A SINE B2 -6 192 3 5 994 225 0 0 0 chrX 53723182 53723207 -112927089 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5 994 238 221 83 56 chrX 53723495 53723567 -112926729 + B1F2 SINE Alu 45 118 -31 5 994 598 259 21 7 chrX 53723844 53723984 -112926312 + B1F SINE Alu 3 144 -5 5 994 1118 216 15 5 chrX 53723994 53724199 -112926097 + B3 SINE B2 1 207 -9 5 994 289 329 55 41 chrX 53724695 53724841 -112925455 + L3 LINE CR1 3146 3293 -1196 5 994 23 0 0 0 chrX 53725094 53725117 -112925179 + AT_rich Low_complexity Low_complexity 1 23 0 5 994 1102 95 7 7 chrX 53725508 53725656 -112924640 + B1_Mus1 SINE Alu 1 148 0 5 994 206 32 32 0 chrX 53725656 53725687 -112924609 + (TAAAAA)n Simple_repeat Simple_repeat 4 35 0 5 994 371 146 241 12 chrX 53725849 53725932 -112924364 - PB1D7 SINE Alu -6 114 13 5 994 727 227 0 0 chrX 53726530 53726662 -112923634 - B1_Mur1 SINE Alu -17 132 1 5 994 216 298 78 55 chrX 53726998 53727126 -112923170 + MIR SINE MIR 103 233 -29 5 994 240 35 0 0 chrX 53727357 53727386 -112922910 + (T)n Simple_repeat Simple_repeat 1 29 0 5 994 330 260 91 0 chrX 53727710 53727787 -112922509 + PB1D10 SINE Alu 7 90 -27 5 994 561 314 36 20 chrX 53727832 53728027 -112922269 - B3A SINE B2 0 198 1 5 994 316 254 46 117 chrX 53728040 53728153 -112922143 - MER33 DNA MER1_type -116 208 103 5 994 346 228 38 12 chrX 53728153 53728233 -112922063 + ID4 SINE ID 2 83 0 5 994 316 254 46 117 chrX 53728233 53728315 -112921981 - MER33 DNA MER1_type -222 102 27 5 994 230 210 161 0 chrX 53728553 53728615 -112921681 + BC1_Mm scRNA scRNA 15 86 -66 5 994 305 291 13 0 chrX 53728630 53728709 -112921587 + ID4_ SINE ID 3 82 -1 5 994 866 192 0 7 chrX 53728870 53729017 -112921279 - B1_Mus1 SINE Alu 0 148 3 5 994 302 154 39 0 chrX 53729379 53729431 -112920865 - ID4_ SINE ID -24 59 6 5 994 402 289 101 8 chrX 53729467 53729596 -112920700 - B1F1 SINE Alu -8 141 1 5 994 461 274 0 9 chrX 53729644 53729758 -112920538 - RSINE1 SINE B4 0 165 53 5 994 670 273 18 58 chrX 53729776 53729947 -112920349 - RSINE1 SINE B4 0 165 2 5 994 1390 106 16 11 chrX 53730076 53730267 -112920029 - B2_Mm2 SINE B2 -3 192 1 5 994 1412 160 78 75 chrX 53730279 53730611 -112919685 - RMER1B Other Other -4 1062 730 5 994 392 376 21 46 chrX 53730925 53731209 -112919087 + L2 LINE L2 2680 2956 -463 5 994 471 135 21 10 chrX 53731971 53732062 -112918234 + (TCTA)n Simple_repeat Simple_repeat 1 93 0 5 994 712 260 28 51 chrX 53732062 53732277 -112918019 - B3 SINE B2 -6 210 1 5 994 225 0 0 0 chrX 53732370 53732395 -112917901 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 5 994 198 0 0 0 chrX 53732426 53732448 -112917848 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 5 994 1278 48 0 0 chrX 53733218 53733364 -112916932 + B1_Mm SINE Alu 2 147 0 5 994 285 29 0 0 chrX 53733366 53733400 -112916896 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 5 994 21 36 0 0 chrX 53733842 53733870 -112916426 + AT_rich Low_complexity Low_complexity 1 28 0 5 994 1293 41 7 0 chrX 53735653 53735799 -112914497 - B1_Mus1 SINE Alu -1 147 1 5 994 183 42 0 0 chrX 53736259 53736283 -112914013 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 994 1383 106 16 0 chrX 53737158 53737346 -112912950 - B2_Mm2 SINE B2 -3 192 2 5 994 351 0 0 0 chrX 53737606 53737645 -112912651 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 5 994 712 101 0 0 chrX 53737646 53737745 -112912551 - B1_Mur3 SINE Alu -13 136 38 5 994 732 176 0 8 chrX 53738697 53738823 -112911473 + B1_Mus2 SINE Alu 3 127 -20 5 994 949 152 12 18 chrX 53738843 53739010 -112911286 + B2_Mm2 SINE B2 3 168 -27 5 994 396 286 95 29 chrX 53739030 53739167 -112911129 + B3A SINE B2 45 190 -8 5 994 836 224 98 39 chrX 53739167 53739338 -112910958 + B3 SINE B2 1 166 -50 5 994 195 42 0 0 chrX 53739338 53739362 -112910934 + (CATA)n Simple_repeat Simple_repeat 3 26 0 5 994 836 224 98 39 chrX 53739362 53739394 -112910902 + B3 SINE B2 167 215 -1 5 994 288 218 43 123 chrX 53739394 53739420 -112910876 + B2_Mm2 SINE B2 175 195 0 5 994 25 0 0 0 chrX 53739421 53739446 -112910850 + AT_rich Low_complexity Low_complexity 1 25 0 5 995 287 293 117 26 chrX 53740245 53740399 -112909897 + L1ME3A LINE L1 5878 6045 -128 5 995 854 251 43 74 chrX 53740752 53741010 -112909286 + B4A SINE B4 36 285 -7 5 995 230 345 93 34 chrX 53740861 53741065 -112909231 - RLTR21 LTR ERVK -186 1386 1171 5 995 186 43 0 0 chrX 53741233 53741256 -112909040 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 5 995 723 181 42 42 chrX 53741270 53741414 -112908882 - B1_Mur3 SINE Alu 0 149 6 5 995 439 269 60 135 chrX 53741275 53741460 -112908836 - B4 SINE B4 -69 223 53 5 995 652 220 138 0 chrX 53743056 53743215 -112907081 + B3 SINE B2 34 214 -2 5 995 309 89 0 0 chrX 53743485 53743530 -112906766 + (TTA)n Simple_repeat Simple_repeat 2 46 0 5 995 2932 130 10 35 chrX 53743597 53744082 -112906214 + Lx4A LINE L1 6584 7056 -2 5 995 25 0 0 0 chrX 53744082 53744107 -112906189 + AT_rich Low_complexity Low_complexity 1 25 0 5 995 427 228 13 0 chrX 53744281 53744360 -112905936 - ID4 SINE ID -2 81 2 5 995 379 281 10 30 chrX 53744992 53745034 -112905262 + PB1D10 SINE Alu 21 62 -55 5 995 1560 63 0 11 chrX 53745034 53745225 -112905071 - B2_Mm2 SINE B2 -5 190 2 5 995 379 281 10 30 chrX 53745225 53745281 -112905015 + PB1D10 SINE Alu 63 117 0 5 995 302 190 212 12 chrX 53745328 53745408 -112904888 - RSINE1 SINE B4 -68 97 2 5 995 715 163 89 0 chrX 53745451 53745574 -112904722 - B1_Mus2 SINE Alu -13 134 1 5 995 230 204 36 18 chrX 53745796 53745851 -112904445 - Tigger5 DNA MER2_type -3 2403 2348 5 995 445 360 12 24 chrX 53745882 53746047 -112904249 - Tigger5 DNA MER2_type -2242 164 2 5 995 393 181 0 0 chrX 53748529 53748623 -112901673 + (TA)n Simple_repeat Simple_repeat 2 95 0 5 995 675 191 0 135 chrX 53750057 53750227 -112900069 - B1_Mur3 SINE Alu -2 147 1 5 995 369 313 100 83 chrX 53750304 53750715 -112899581 - LTR16B1 LTR ERVL -33 447 30 5 995 1554 64 0 5 chrX 53751665 53751854 -112898442 + B2_Mm2 SINE B2 1 188 -7 5 995 21 0 0 0 chrX 53751854 53751875 -112898421 + AT_rich Low_complexity Low_complexity 1 21 0 5 995 315 0 0 0 chrX 53751930 53751965 -112898331 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 995 272 96 0 37 chrX 53751967 53752021 -112898275 + (CAGAGA)n Simple_repeat Simple_repeat 3 54 0 5 995 211 361 93 0 chrX 53752063 53752074 -112898222 + ID_B1 SINE B4 71 90 -134 5 995 289 297 91 0 chrX 53752074 53752178 -112898118 + PB1D7 SINE Alu 1 119 -1 5 995 934 210 50 64 chrX 53752182 53752401 -112897895 + B3 SINE B2 1 216 0 5 995 186 329 27 27 chrX 53753185 53753260 -112897036 - MIRc SINE MIR -192 76 2 5 995 318 351 7 20 chrX 53753603 53753754 -112896542 + MIR SINE MIR 100 248 -14 5 995 351 0 0 0 chrX 53754134 53754173 -112896123 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 995 1181 65 0 0 chrX 53754173 53754311 -112895985 - B1_Mus1 SINE Alu -9 139 2 5 995 560 221 182 3 chrX 53754359 53754523 -112895773 + B3A SINE B2 11 199 -17 5 995 41 21 0 0 chrX 53755164 53755212 -112895084 + AT_rich Low_complexity Low_complexity 1 48 0 5 995 249 324 19 56 chrX 53755811 53755919 -112894377 + L2b LINE L2 3240 3343 -32 5 995 2548 209 33 33 chrX 53756407 53757040 -112893256 - RMER13B LTR ERVK -4 904 272 5 995 1560 208 72 53 chrX 53757039 53757471 -112892825 - RMER17B LTR ERVK -518 440 1 5 995 1135 205 144 24 chrX 53757471 53757857 -112892439 - RMER17A-int LTR ERVK 0 1728 1297 5 995 883 301 9 0 chrX 53758356 53758569 -112891727 - ID_B1 SINE B4 -8 216 2 5 995 542 292 136 34 chrX 53758646 53758940 -112891356 - MLT1D LTR MaLR -5 500 177 5 995 750 275 106 18 chrX 53758940 53759214 -112891082 - Lx8 LINE L1 0 7473 7176 5 995 618 14 0 0 chrX 53759738 53759809 -112890487 + (TC)n Simple_repeat Simple_repeat 2 72 0 5 995 527 284 130 34 chrX 53761104 53761214 -112889082 + RSINE1 SINE B4 4 126 -39 5 995 342 0 0 0 chrX 53761214 53761252 -112889044 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 995 527 284 130 34 chrX 53761252 53761287 -112889009 + RSINE1 SINE B4 127 163 -2 5 995 2681 301 91 31 chrX 53761469 53762568 -112887728 - Lx8 LINE L1 -10 7463 6288 5 995 2780 145 208 0 chrX 53762568 53763044 -112887252 + RMER15 LTR ERVL 1 575 0 5 995 2681 301 91 31 chrX 53763044 53763128 -112887168 - Lx8 LINE L1 -1186 6287 6209 5 995 286 294 53 38 chrX 53763118 53763249 -112887047 + L1MB4 LINE L1 133 265 -6342 5 995 410 273 82 150 chrX 53763271 53763667 -112886629 + L1MB4 LINE L1 1298 1618 -5131 5 995 1576 162 189 9 chrX 53763667 53763984 -112886312 - ORR1D1 LTR MaLR 0 374 1 5 995 281 273 82 150 chrX 53763984 53764305 -112885991 + L1MB4 LINE L1 1619 1959 -4790 5 995 269 257 105 26 chrX 53764305 53764381 -112885915 + ID4_ SINE ID 1 82 -1 5 995 281 273 82 150 chrX 53764381 53764618 -112885678 + L1MB4 LINE L1 1960 2188 -4561 5 995 606 269 197 15 chrX 53764886 53765293 -112885003 + L1MB4 LINE L1 2788 3268 -3479 5 995 254 246 92 42 chrX 53765337 53765456 -112884840 + LTR41 LTR ERVL 20 144 -624 5 995 252 194 43 31 chrX 53766897 53766979 -112883317 - L1M3 LINE L1 -704 5475 5394 5 995 335 302 85 8 chrX 53767106 53767236 -112883060 - B1F SINE Alu -7 142 3 5 995 456 272 48 0 chrX 53767343 53767446 -112882850 - B1F1 SINE Alu -40 109 2 5 995 274 275 42 84 chrX 53767547 53767650 -112882646 + PB1D10 SINE Alu 7 105 -15 5 995 273 75 0 0 chrX 53767650 53767690 -112882606 + (CAAT)n Simple_repeat Simple_repeat 3 42 0 5 995 231 275 42 84 chrX 53767690 53767705 -112882591 + PB1D7 SINE Alu 106 120 0 5 995 6803 95 17 11 chrX 53768051 53769005 -112881291 + Lx LINE L1 5694 6653 -1 5 995 541 248 13 13 chrX 53768996 53769147 -112881149 - Lx7 LINE L1 -333 7363 7213 5 995 2245 113 0 0 chrX 53769150 53769469 -112880827 - ORR1A2 LTR MaLR -8 319 1 5 995 1663 261 5 3 chrX 53769476 53769857 -112880439 - Lx7 LINE L1 -483 7213 6832 5 995 453 224 31 23 chrX 53769858 53769986 -112880310 + Lx7 LINE L1 5901 6029 -1667 5 995 405 212 141 0 chrX 53769996 53770081 -112880215 + Lx7 LINE L1 6745 6841 -855 5 995 1001 258 52 55 chrX 53770279 53770570 -112879726 - B4 SINE B4 -2 290 1 6 995 233 323 71 21 chrX 53770802 53771042 -112879254 - L1M5 LINE L1 -1637 4509 4258 6 995 275 305 46 46 chrX 53771137 53771312 -112878984 - L1M5 LINE L1 -2392 3754 3580 6 995 291 280 18 36 chrX 53771588 53771699 -112878597 - B1F SINE Alu -40 109 1 6 995 1341 101 16 11 chrX 53771807 53771997 -112878299 + B2_Mm1t SINE B2 1 191 -2 6 995 812 330 62 25 chrX 53772012 53772580 -112877716 - L1M2 LINE L1 -3411 3434 2846 6 995 247 303 13 47 chrX 53772684 53772820 -112877476 - L1M2 LINE L1 -4250 2599 2468 6 995 795 21 0 0 chrX 53772820 53772913 -112877383 + (TCCCC)n Simple_repeat Simple_repeat 4 96 0 6 995 247 303 13 47 chrX 53772913 53772925 -112877371 - L1M2 LINE L1 -4382 2467 2456 6 995 741 210 72 0 chrX 53772932 53773070 -112877226 - B1_Mur2 SINE Alu -1 148 1 6 995 462 294 49 0 chrX 53773099 53773201 -112877095 + RSINE1 SINE B4 4 110 -55 6 995 261 310 20 89 chrX 53773229 53773471 -112876825 - L1_Rod LINE L1 -4094 1792 1563 6 995 294 73 0 0 chrX 53773565 53773606 -112876690 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 6 995 828 274 47 0 chrX 53773607 53773797 -112876499 - B3 SINE B2 -15 201 3 6 995 796 174 264 0 chrX 53774176 53774343 -112875953 - B3 SINE B2 -5 211 1 6 995 413 276 59 46 chrX 53774514 53774666 -112875630 - B2_Mm2 SINE B2 -26 169 16 6 995 212 0 36 0 chrX 53774679 53774707 -112875589 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 6 995 261 0 0 0 chrX 53775300 53775329 -112874967 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 995 819 92 0 0 chrX 53775346 53775455 -112874841 - B1_Mus1 SINE Alu -39 109 1 6 995 259 241 22 36 chrX 53775455 53775486 -112874810 - ORR1B1-int LTR MaLR -863 646 618 6 995 182 310 22 44 chrX 53775631 53775722 -112874574 + L2b LINE L2 3249 3337 -38 6 995 516 45 0 0 chrX 53775857 53775924 -112874372 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 995 556 312 65 79 chrX 53775935 53776227 -112874069 - B4A SINE B4 -2 290 3 6 995 241 226 109 72 chrX 53776857 53776995 -112873301 - Lx7 LINE L1 0 7696 7554 6 995 186 191 0 0 chrX 53777019 53777066 -112873230 + (CAGA)n Simple_repeat Simple_repeat 4 50 0 6 995 270 0 0 0 chrX 53777073 53777103 -112873193 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 995 1665 285 47 14 chrX 53777112 53777620 -112872676 - Lx7 LINE L1 -343 7353 6829 6 995 477 195 96 17 chrX 53778349 53778464 -112871832 + B3 SINE B2 6 129 -87 6 995 381 304 21 21 chrX 53779288 53779429 -112870867 - B1F SINE Alu 0 149 9 6 995 282 282 0 37 chrX 53779544 53779625 -112870671 + ID_B1 SINE B4 81 158 -66 6 995 707 273 26 11 chrX 53779934 53780123 -112870173 + B3A SINE B2 4 195 -3 6 995 286 244 87 51 chrX 53780491 53780629 -112869667 + RLTR23 LTR ERV1 286 428 -2 6 995 501 310 22 41 chrX 53780629 53780874 -112869422 - ERVL-B4-int LTR ERVL -1392 4322 4071 6 995 684 300 90 64 chrX 53781087 53781122 -112869174 - MLT2B5 LTR ERVL -63 538 507 6 995 945 175 160 0 chrX 53781122 53781316 -112868980 + URR1B DNA MER1_type 1 225 0 6 995 684 300 90 64 chrX 53781316 53781625 -112868671 - MLT2B5 LTR ERVL -95 506 185 6 995 224 217 29 0 chrX 53781625 53781694 -112868602 + CT-rich Low_complexity Low_complexity 1 71 0 6 995 504 228 35 9 chrX 53781783 53781898 -112868398 + B1_Mur1 SINE Alu 32 149 0 6 995 394 238 0 0 chrX 53781907 53781987 -112868309 - MLT2B5 LTR ERVL -551 166 87 6 995 296 311 9 19 chrX 53782222 53782330 -112867966 + PB1D10 SINE Alu 2 108 -9 6 995 239 339 31 0 chrX 53782349 53782414 -112867882 + ID4_ SINE ID 16 82 -1 6 995 329 329 14 0 chrX 53782553 53782693 -112867603 - ERVL-B4-int LTR ERVL -2791 2923 2782 6 995 24 67 0 0 chrX 53782906 53782951 -112867345 + AT_rich Low_complexity Low_complexity 1 45 0 6 995 2550 78 0 3 chrX 53783120 53783454 -112866842 - L1Md_F2 LINE L1 0 6582 6250 6 995 267 313 96 44 chrX 53783461 53783732 -112866564 - ERVL-B4-int LTR ERVL -3016 2651 2367 6 995 702 246 55 15 chrX 53784558 53784760 -112865536 - B3 SINE B2 -6 210 1 6 995 272 136 116 43 chrX 53785340 53785409 -112864887 - B3 SINE B2 0 216 143 6 995 1206 55 0 0 chrX 53785599 53785745 -112864551 - B1_Mus1 SINE Alu -2 146 1 6 995 716 319 22 17 chrX 53785829 53786059 -112864237 - Lx8 LINE L1 -690 6783 6553 6 995 253 296 141 0 chrX 53786078 53786149 -112864147 + RSINE1 SINE B4 68 148 -17 6 995 357 24 0 0 chrX 53786153 53786195 -112864101 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 995 467 313 0 64 chrX 53786268 53786425 -112863871 - RSINE1 SINE B4 -17 148 2 6 995 447 316 0 0 chrX 53786541 53786658 -112863638 + ID_B1 SINE B4 87 203 -21 6 995 185 0 40 0 chrX 53786663 53786688 -112863608 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 6 995 2064 196 65 28 chrX 53786740 53787361 -112862935 - BGLII_B LTR ERVK 0 553 1 6 995 318 214 218 15 chrX 53787603 53787736 -112862560 + B4A SINE B4 40 199 -93 6 995 369 0 0 0 chrX 53787845 53787886 -112862410 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 995 306 0 0 0 chrX 53787886 53787919 -112862377 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 995 234 243 13 13 chrX 53788810 53788885 -112861411 - MLT1E3 LTR MaLR -428 196 122 6 995 1699 26 0 0 chrX 53789485 53789677 -112860619 - B2_Mm1t SINE B2 0 193 2 6 995 281 298 192 8 chrX 53789702 53789827 -112860469 + RSINE1 SINE B4 3 150 -15 6 995 402 227 0 0 chrX 53790057 53790132 -112860164 + ID_B1 SINE B4 82 156 -68 6 995 294 268 47 47 chrX 53790132 53790143 -112860153 + PB1 SINE Alu 1 86 -41 6 995 329 280 88 56 chrX 53790179 53790304 -112859992 + L1M3d LINE L1 85 213 -5678 6 995 583 261 70 117 chrX 53790597 53790850 -112859446 + L1MA8 LINE L1 5900 6129 -162 6 995 327 288 45 0 chrX 53790850 53790961 -112859335 - PB1D7 SINE Alu 0 120 5 6 995 583 261 70 117 chrX 53790961 53791093 -112859203 + L1MA8 LINE L1 6130 6267 -24 6 995 407 226 0 131 chrX 53791110 53791124 -112859172 + MT2B LTR ERVL 152 239 -362 6 995 723 196 0 50 chrX 53791124 53791208 -112859088 + B1_Mus2 SINE Alu 2 81 -66 6 995 3388 134 14 18 chrX 53791208 53791771 -112858525 + RLTR31_Mm LTR ERVK 1 561 0 6 995 407 226 0 131 chrX 53791771 53791794 -112858502 + MT2B LTR ERVL 240 257 -344 6 995 723 196 0 50 chrX 53791794 53791826 -112858470 + B1_Mus2 SINE Alu 82 134 -13 6 995 1151 139 21 16 chrX 53791846 53792036 -112858260 + B2_Mm2 SINE B2 1 191 -4 6 995 26 30 0 0 chrX 53792040 53792073 -112858223 + AT_rich Low_complexity Low_complexity 1 33 0 6 995 1034 121 179 55 chrX 53792101 53792302 -112857994 + URR1A DNA MER1_type 1 226 0 6 995 309 338 66 41 chrX 53792613 53792884 -112857412 + ERVL-E-int LTR ERVL 988 1265 -4449 6 995 459 0 0 0 chrX 53793412 53793463 -112856833 + (TC)n Simple_repeat Simple_repeat 2 52 0 6 995 1161 76 0 0 chrX 53793463 53793608 -112856688 - B1_Mm SINE Alu 0 147 3 6 995 283 245 44 62 chrX 53793951 53793966 -112856330 + MT2B2 LTR ERVL 153 165 -419 6 995 524 202 96 0 chrX 53793966 53794070 -112856226 + B1_Mur1 SINE Alu 2 115 -34 6 995 295 255 86 52 chrX 53793967 53794083 -112856213 + ID_B1 SINE B4 84 203 -21 6 995 482 309 86 24 chrX 53794443 53794698 -112855598 + ERVL-E-int LTR ERVL 2019 2289 -3378 6 995 229 208 22 58 chrX 53794821 53794959 -112855337 + ORR1B1-int LTR MaLR 622 754 -755 6 995 385 182 16 134 chrX 53794837 53794964 -112855332 + MT2B LTR ERVL 153 264 -337 6 995 1072 43 0 0 chrX 53794860 53794999 -112855297 + B1_Mus2 SINE Alu 9 147 0 6 995 593 27 0 13 chrX 53795013 53795089 -112855207 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 6 995 853 302 8 4 chrX 53795142 53795385 -112854911 - B4A SINE B4 -40 252 9 6 995 335 314 17 51 chrX 53796341 53796519 -112853777 + ERVL-E-int LTR ERVL 5026 5197 -470 6 995 297 240 26 13 chrX 53796519 53796595 -112853701 + B4 SINE B4 80 156 -136 6 995 444 172 214 8 chrX 53796531 53796648 -112853648 + B1_Mur1 SINE Alu 9 149 0 6 995 198 0 0 0 chrX 53796738 53796760 -112853536 + (TTTTTG)n Simple_repeat Simple_repeat 5 26 0 6 995 1076 90 0 0 chrX 53796760 53796904 -112853392 - B1_Mus1 SINE Alu 0 148 5 6 995 306 77 46 0 chrX 53796910 53796975 -112853321 - B2_Mm2 SINE B2 0 195 128 6 995 838 232 16 21 chrX 53799702 53799891 -112850405 + B3 SINE B2 1 188 -28 6 995 235 0 28 28 chrX 53799891 53799927 -112850369 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 995 741 160 8 0 chrX 53800493 53800618 -112849678 + B1_Mur3 SINE Alu 3 128 -21 6 995 277 387 46 0 chrX 53801238 53801476 -112848820 + L1M2 LINE L1 2478 2726 -4281 6 995 4963 87 40 8 chrX 53801521 53802230 -112848066 + Lx3_Mus LINE L1 6278 7008 -1 6 995 281 135 0 19 chrX 53802260 53802313 -112847983 + GA-rich Low_complexity Low_complexity 2 53 0 6 995 557 314 24 31 chrX 53802662 53802954 -112847342 + B4A SINE B4 1 290 -2 6 995 232 247 26 0 chrX 53803030 53803107 -112847189 + L1M2 LINE L1 3483 3561 -3773 6 995 1460 225 74 53 chrX 53803451 53803976 -112846320 - RLTR40 LTR ERVK -262 555 20 6 995 351 268 89 2 chrX 53804057 53804256 -112846040 + L1M2 LINE L1 2527 2759 -3381 6 995 336 24 0 0 chrX 53804258 53804299 -112845997 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 6 995 799 96 132 7 chrX 53804312 53804448 -112845848 + B2_Mm2 SINE B2 29 181 -14 6 995 216 158 0 0 chrX 53804520 53804558 -112845738 + (TATG)n Simple_repeat Simple_repeat 2 39 0 6 995 302 101 75 12 chrX 53804551 53804631 -112845665 + (TTATA)n Simple_repeat Simple_repeat 5 89 0 6 995 610 304 165 5 chrX 53804704 53805097 -112845199 + L1M2 LINE L1 3359 3814 -2329 6 995 924 327 74 43 chrX 53805193 53805730 -112844566 + L1M2 LINE L1 4279 4817 -1326 6 995 1028 56 0 7 chrX 53805730 53805875 -112844421 + (GA)n Simple_repeat Simple_repeat 1 144 0 6 995 924 327 74 43 chrX 53805875 53806233 -112844063 + L1M2 LINE L1 4818 5201 -942 6 995 355 283 81 49 chrX 53806526 53806749 -112843547 + L1M2 LINE L1 4373 4602 -2404 6 995 402 264 94 69 chrX 53806767 53806785 -112843511 - RSINE1 SINE B4 0 165 148 6 995 213 65 0 0 chrX 53806785 53806816 -112843480 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 6 995 402 264 94 69 chrX 53806816 53806956 -112843340 - RSINE1 SINE B4 -18 147 3 6 995 1981 25 17 0 chrX 53807052 53807287 -112843009 - L1Md_F3 LINE L1 0 6584 6346 6 995 594 200 108 0 chrX 53807623 53807743 -112842553 + B1_Mur3 SINE Alu 6 138 -11 6 995 587 280 65 0 chrX 53808010 53808178 -112842118 + B3A SINE B2 4 182 -16 6 995 22 70 0 0 chrX 53808189 53808232 -112842064 + AT_rich Low_complexity Low_complexity 1 43 0 6 995 558 261 145 0 chrX 53808236 53808374 -112841922 + B3A SINE B2 3 160 -38 7 995 294 29 0 0 chrX 53808383 53808418 -112841878 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 995 450 0 0 0 chrX 53808418 53808468 -112841828 + (TA)n Simple_repeat Simple_repeat 1 50 0 7 995 522 192 57 0 chrX 53808750 53808869 -112841427 + B1_Mur4 SINE Alu 6 149 -1 7 995 432 0 0 0 chrX 53808950 53808998 -112841298 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 7 995 244 314 76 15 chrX 53808999 53809196 -112841100 + L1M2 LINE L1 5482 5690 -1316 6 995 360 0 0 0 chrX 53809374 53809414 -112840882 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 995 387 130 0 0 chrX 53809414 53809491 -112840805 + (GA)n Simple_repeat Simple_repeat 2 78 0 7 995 381 310 70 0 chrX 53809516 53809658 -112840638 - RSINE1 SINE B4 -10 155 4 7 995 2441 35 3 68 chrX 53809745 53810084 -112840212 - L1_Mus1 LINE L1 0 6567 6251 7 995 307 163 189 32 chrX 53810100 53810195 -112840101 - B1F SINE Alu 0 149 40 7 995 303 231 90 27 chrX 53810106 53810217 -112840079 - ID_B1 SINE B4 -3 221 104 7 995 231 336 14 14 chrX 53810292 53810434 -112839862 + CT-rich Low_complexity Low_complexity 3 144 0 7 995 252 125 0 0 chrX 53810466 53810506 -112839790 - B4A SINE B4 -203 89 50 7 995 1249 34 0 0 chrX 53811017 53811164 -112839132 - B1_Mus2 SINE Alu 0 147 1 7 995 641 84 0 21 chrX 53811210 53811307 -112838989 + B2_Mm2 SINE B2 1 95 -100 7 995 686 178 0 22 chrX 53811378 53811509 -112838787 - MERVL_2A-int LTR ERVL -3771 1990 1780 7 995 2004 174 12 0 chrX 53811540 53811880 -112838416 - MERVL_2A-int LTR ERVL -3961 1800 1457 7 995 430 248 105 26 chrX 53811921 53812074 -112838222 + ERVL-E-int LTR ERVL 446 610 -5057 7 995 259 261 0 44 chrX 53812104 53812172 -112838124 - MLT1B LTR MaLR -61 329 265 7 995 1275 37 6 0 chrX 53812272 53812436 -112837860 - L1Md_F2 LINE L1 -1 6581 6417 7 995 414 305 52 37 chrX 53812656 53812792 -112837504 + RSINE1 SINE B4 24 161 -4 7 995 2093 145 68 27 chrX 53812830 53813020 -112837276 - ORR1C2 LTR MaLR 0 384 197 7 995 324 0 0 0 chrX 53813020 53813056 -112837240 + (GA)n Simple_repeat Simple_repeat 1 36 0 7 995 2093 145 68 27 chrX 53813056 53813234 -112837062 - ORR1C2 LTR MaLR -188 196 2 7 995 464 204 51 0 chrX 53813277 53813375 -112836921 - B3A SINE B2 -90 108 6 7 995 511 265 14 70 chrX 53813476 53813532 -112836764 - RSINE1 SINE B4 -1 164 117 7 995 2527 11 0 0 chrX 53813532 53813811 -112836485 - L1Md_A LINE L1 0 6582 6304 7 995 511 265 14 70 chrX 53813811 53813896 -112836400 - RSINE1 SINE B4 -49 116 31 7 995 274 267 13 13 chrX 53813926 53814002 -112836294 - L1M4 LINE L1 -490 5694 5619 7 995 303 141 0 0 chrX 53814386 53814450 -112835846 + (GA)n Simple_repeat Simple_repeat 2 65 0 7 995 216 0 0 0 chrX 53815919 53815943 -112834353 + (TTG)n Simple_repeat Simple_repeat 2 25 0 7 995 22 0 0 0 chrX 53816221 53816243 -112834053 + AT_rich Low_complexity Low_complexity 1 22 0 7 995 299 391 52 19 chrX 53816769 53816980 -112833316 - RMER15-int LTR ERVL -971 4028 3811 7 995 617 206 24 0 chrX 53817509 53817635 -112832661 - B3 SINE B2 0 216 88 7 995 824 343 36 19 chrX 53817649 53818062 -112832234 - RMER15-int LTR ERVL -1989 3010 2591 7 995 599 108 0 29 chrX 53818082 53818187 -112832109 - B2_Mm1a SINE B2 0 193 92 7 995 1039 99 98 6 chrX 53818231 53818394 -112831902 - B2_Mm1a SINE B2 -14 179 2 7 995 374 147 0 14 chrX 53818396 53818465 -112831831 + MTC LTR MaLR 6 73 -346 7 995 2989 156 30 25 chrX 53818468 53819040 -112831256 + RMER15 LTR ERVL 1 575 0 7 995 1163 196 199 17 chrX 53819040 53819335 -112830961 + MTC LTR MaLR 73 421 0 7 995 808 221 41 68 chrX 53819385 53819567 -112830729 + B3 SINE B2 4 183 -33 7 995 1455 228 96 15 chrX 53819567 53819910 -112830386 - ORR1D1 LTR MaLR -3 371 1 7 995 808 221 41 68 chrX 53819910 53819946 -112830350 + B3 SINE B2 184 216 0 7 995 578 323 107 44 chrX 53820026 53820389 -112829907 - RMER15-int LTR ERVL -2618 2381 1996 7 995 830 101 0 0 chrX 53820469 53820588 -112829708 + (TTCTC)n Simple_repeat Simple_repeat 2 120 0 7 995 864 264 60 28 chrX 53820588 53820872 -112829424 - Lx6 LINE L1 0 7460 7168 7 995 596 301 88 77 chrX 53821924 53822434 -112827862 - RMER15-int LTR ERVL -3877 1122 607 7 995 1432 52 40 0 chrX 53822443 53822617 -112827679 - B2_Mm2 SINE B2 -14 181 1 7 995 21 0 0 0 chrX 53822626 53822647 -112827649 + AT_rich Low_complexity Low_complexity 1 21 0 7 995 1613 36 0 20 chrX 53822647 53822843 -112827453 - B2_Mm1a SINE B2 0 193 2 7 995 275 181 216 31 chrX 53822843 53822940 -112827356 - RMER15-int LTR ERVL -4378 621 507 7 995 4021 204 54 82 chrX 53823287 53823405 -112826891 - RMER1A Other Other -1 1029 900 7 995 378 0 0 0 chrX 53823405 53823447 -112826849 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 995 4021 224 41 84 chrX 53823447 53824741 -112825555 - RMER1A Other Other -131 899 1 7 995 251 167 65 32 chrX 53824986 53825048 -112825248 + RSINE1 SINE B4 79 142 -23 7 995 234 62 0 0 chrX 53825056 53825088 -112825208 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 995 598 157 247 32 chrX 53825767 53825925 -112824371 - B2_Mm2 SINE B2 -2 193 2 7 995 700 86 0 9 chrX 53825930 53826036 -112824260 - BC1_Mm scRNA scRNA -47 105 1 7 995 240 196 0 0 chrX 53825996 53826042 -112824254 - ZP3AR Satellite Satellite -130 82 37 7 995 410 337 111 17 chrX 53826250 53826269 -112824027 - B3 SINE B2 -27 189 173 7 995 324 48 0 0 chrX 53826269 53826311 -112823985 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 995 435 323 118 2 chrX 53826311 53826463 -112823833 - B3A SINE B2 -44 172 2 7 995 765 160 20 34 chrX 53826911 53827060 -112823236 - B1_Mur2 SINE Alu 0 149 3 7 995 187 335 28 83 chrX 53827442 53827696 -112822600 - L2 LINE L2 -443 2976 2737 7 995 186 217 0 0 chrX 53827806 53827832 -112822464 + A-rich Low_complexity Low_complexity 5 30 0 7 995 1434 63 26 21 chrX 53827832 53828026 -112822270 + B2_Mm2 SINE B2 1 195 0 7 995 186 217 0 0 chrX 53828026 53828045 -112822251 + A-rich Low_complexity Low_complexity 31 49 0 7 995 226 252 54 116 chrX 53828801 53828913 -112821383 + MT2B LTR ERVL 153 257 -344 7 995 583 219 8 16 chrX 53828824 53828949 -112821347 + B1_Mur1 SINE Alu 17 140 -9 7 995 213 226 35 12 chrX 53829198 53829283 -112821013 + (TA)n Simple_repeat Simple_repeat 1 87 0 7 995 345 229 12 0 chrX 53829789 53829872 -112820424 + PB1D10 SINE Alu 33 116 -1 7 995 695 112 8 0 chrX 53829911 53830036 -112820260 + (TC)n Simple_repeat Simple_repeat 1 126 0 7 995 279 0 0 0 chrX 53830036 53830067 -112820229 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 995 263 283 140 78 chrX 53830095 53830352 -112819944 - B4A SINE B4 -16 276 4 7 995 336 302 87 7 chrX 53830742 53830892 -112819404 + RSINE1 SINE B4 4 165 0 7 995 333 0 0 0 chrX 53830962 53830999 -112819297 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 995 1551 280 153 26 chrX 53831214 53832139 -112818157 + L1MC3 LINE L1 5104 6129 -1656 7 995 343 318 0 26 chrX 53832151 53832264 -112818032 + PB1D10 SINE Alu 6 115 -2 7 995 363 287 18 9 chrX 53832360 53832469 -112817827 + L1MC3 LINE L1 6125 6234 -1551 7 995 192 149 0 0 chrX 53832538 53832585 -112817711 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 7 995 614 165 0 8 chrX 53832585 53832713 -112817583 + GA-rich Low_complexity Low_complexity 2 128 0 7 995 1455 78 10 5 chrX 53832720 53832913 -112817383 + B2_Mm2 SINE B2 2 195 0 7 995 2124 294 97 39 chrX 53832938 53833891 -112816405 + L1MC3 LINE L1 6243 7250 -535 7 995 638 254 165 15 chrX 53833967 53834227 -112816069 + L1MC3 LINE L1 7464 7762 -23 7 995 222 62 0 0 chrX 53834422 53834454 -112815842 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 7 995 243 296 0 24 chrX 53835281 53835364 -112814932 + ID4 SINE ID 2 82 -1 7 995 399 227 144 30 chrX 53835637 53835769 -112814527 + B1F1 SINE Alu 1 147 -2 7 995 7738 17 1 0 chrX 53835935 53836764 -112813532 - L1Md_A LINE L1 0 6582 5753 7 995 667 236 28 7 chrX 53837784 53837929 -112812367 - B1_Mus1 SINE Alu 0 148 1 7 995 242 306 37 98 chrX 53838209 53838233 -112812063 - YREP_Mm Unknown Unknown -1483 329 226 7 995 529 264 8 8 chrX 53838233 53838363 -112811933 + ID_B1 SINE B4 86 215 -9 7 995 450 205 9 0 chrX 53838384 53838496 -112811800 + Lx9 LINE L1 7532 7644 0 7 995 1106 134 0 0 chrX 53839423 53839572 -112810724 + B1_Mur4 SINE Alu 2 150 0 7 995 302 263 40 0 chrX 53839731 53839807 -112810489 - ID4 SINE ID 0 83 5 7 995 482 295 91 41 chrX 53839890 53840109 -112810187 + L1MB8 LINE L1 5898 6127 -51 7 995 424 287 0 47 chrX 53840120 53840226 -112810070 - PB1D10 SINE Alu -5 112 12 7 995 447 288 29 9 chrX 53840467 53840572 -112809724 - PB1D10 SINE Alu -10 107 1 7 995 993 226 78 10 chrX 53840710 53840916 -112809380 + ID_B1 SINE B4 2 221 -3 7 995 35 24 0 0 chrX 53843045 53843087 -112807209 + AT_rich Low_complexity Low_complexity 1 42 0 7 995 612 282 64 39 chrX 53843221 53843424 -112806872 + B3 SINE B2 8 215 -1 7 995 221 238 48 0 chrX 53843767 53843830 -112806466 + GA-rich Low_complexity Low_complexity 4 69 0 7 995 385 243 90 36 chrX 53843964 53844075 -112806221 - PB1D10 SINE Alu 0 117 1 7 995 1094 267 54 10 chrX 53844605 53844919 -112805377 - Lx8 LINE L1 -218 7255 6928 7 995 1022 252 118 17 chrX 53844909 53845282 -112805014 + L1_Mur3 LINE L1 3103 3554 -2586 7 995 408 281 199 35 chrX 53845700 53846128 -112804168 - L1ME3B LINE L1 -189 6051 5554 7 995 247 291 113 43 chrX 53846411 53846526 -112803770 - PB1 SINE Alu 0 127 5 7 995 232 232 28 112 chrX 53846692 53846799 -112803497 + MT2B LTR ERVL 147 244 -357 7 995 477 236 56 16 chrX 53846726 53846851 -112803445 + ID_B1 SINE B4 94 223 -1 7 995 518 196 26 9 chrX 53846884 53846997 -112803299 - Lx9 LINE L1 -239 7405 7291 7 995 962 186 68 9 chrX 53846991 53847213 -112803083 + Lx9 LINE L1 7403 7637 -7 7 995 529 270 42 42 chrX 53847315 53847458 -112802838 - RSINE1 SINE B4 -21 144 2 7 995 687 223 0 71 chrX 53847800 53847969 -112802327 + RSINE1 SINE B4 3 159 -6 7 995 21 57 0 0 chrX 53847969 53848004 -112802292 + AT_rich Low_complexity Low_complexity 1 35 0 7 995 590 244 17 0 chrX 53848075 53848190 -112802106 - PB1D7 SINE Alu 0 120 4 7 995 746 208 0 111 chrX 53848262 53848424 -112801872 + B1_Mur1 SINE Alu 1 144 -5 7 995 24 53 0 0 chrX 53848467 53848505 -112801791 + AT_rich Low_complexity Low_complexity 1 38 0 8 995 701 188 114 0 chrX 53850009 53850158 -112800138 - MER5A1 DNA MER1_type 0 166 1 8 995 363 96 0 0 chrX 53850206 53850258 -112800038 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 995 193 53 51 26 chrX 53850399 53850438 -112799858 + (CAAAAA)n Simple_repeat Simple_repeat 4 43 0 8 995 226 295 82 21 chrX 53850459 53850556 -112799740 - MIRc SINE MIR -164 104 2 8 995 2774 81 43 5 chrX 53852826 53853200 -112797096 + Lx2 LINE L1 6609 6996 -1 8 995 272 303 8 76 chrX 53853369 53853481 -112796815 - PB1D7 SINE Alu -14 106 1 8 995 231 88 0 0 chrX 53853520 53853554 -112796742 + (CAGAGA)n Simple_repeat Simple_repeat 3 36 0 8 995 1557 50 11 0 chrX 53853705 53853884 -112796412 - B2_Mm1t SINE B2 -12 181 1 8 995 397 317 0 47 chrX 53854000 53854129 -112796167 - PB1 SINE Alu -1 126 4 8 995 222 321 12 0 chrX 53854705 53854789 -112795507 + B2_Mm1t SINE B2 2 86 -107 8 995 312 27 0 0 chrX 53854832 53854869 -112795427 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 995 217 222 0 22 chrX 53854994 53855040 -112795256 + CT-rich Low_complexity Low_complexity 3 47 0 8 995 180 0 0 0 chrX 53855256 53855276 -112795020 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 995 310 323 149 5 chrX 53855642 53855857 -112794439 + MIR SINE MIR 27 268 0 8 995 34 0 0 0 chrX 53855858 53855892 -112794404 + AT_rich Low_complexity Low_complexity 1 34 0 8 995 434 255 58 58 chrX 53855909 53856063 -112794233 - B3A SINE B2 -15 201 48 8 995 988 97 7 7 chrX 53856057 53856202 -112794094 - B2_Mm1t SINE B2 -3 190 46 8 995 268 296 2 101 chrX 53856199 53856314 -112793982 - B4 SINE B4 -61 104 1 8 995 683 0 27 36 chrX 53856368 53856479 -112793817 + (TTCTC)n Simple_repeat Simple_repeat 5 114 0 8 995 568 303 84 98 chrX 53856480 53856776 -112793520 - B4 SINE B4 0 292 1 8 995 878 144 106 0 chrX 53856888 53857020 -112793276 - B1_Mur4 SINE Alu 0 150 5 8 995 221 159 413 0 chrX 53857043 53857106 -112793190 - PB1D9 SINE Alu 0 120 32 8 995 1472 76 0 16 chrX 53857222 53857410 -112792886 + B2_Mm2 SINE B2 4 188 -7 8 995 619 294 0 20 chrX 53857747 53857896 -112792400 - B1F1 SINE Alu -1 148 3 8 995 432 205 13 13 chrX 53858035 53858114 -112792182 - ID4_ SINE ID -2 81 3 8 995 1585 219 106 18 chrX 53858257 53858597 -112791699 + ORR1D2 LTR MaLR 1 370 0 8 995 373 233 0 82 chrX 53858605 53858703 -112791593 - PB1D7 SINE Alu -15 105 16 8 995 237 234 0 0 chrX 53858990 53859037 -112791259 - L2a LINE L2 -5 3421 3375 8 995 422 197 285 23 chrX 53859208 53859338 -112790958 - RSINE1 SINE B4 0 165 2 8 995 288 0 0 0 chrX 53859688 53859720 -112790576 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 995 546 279 146 36 chrX 53859932 53860185 -112790111 - MER58B DNA MER1_type 0 341 61 8 995 315 0 0 0 chrX 53864256 53864291 -112786005 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 995 198 0 0 0 chrX 53864370 53864392 -112785904 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 8 995 21 0 0 0 chrX 53864956 53864977 -112785319 + AT_rich Low_complexity Low_complexity 1 21 0 8 995 862 248 14 10 chrX 53865241 53865449 -112784847 + B3 SINE B2 6 214 -2 8 995 266 246 18 0 chrX 53865480 53865537 -112784759 - MER58B DNA MER1_type -250 91 34 8 995 197 261 0 21 chrX 53865673 53865720 -112784576 + MIRb SINE MIR 215 260 -8 8 995 324 364 20 0 chrX 53866218 53866317 -112783979 - PB1D7 SINE Alu -19 101 1 8 995 368 228 111 46 chrX 53866361 53866478 -112783818 + PB1D7 SINE Alu 2 124 -3 8 995 871 281 94 26 chrX 53866567 53866834 -112783462 - B4A SINE B4 -7 285 1 8 995 270 284 40 59 chrX 53867053 53867154 -112783142 - L2c LINE L2 -10 3377 3279 8 995 794 76 242 17 chrX 53867172 53867292 -112783004 + B1_Mus1 SINE Alu 2 148 0 8 995 452 315 84 64 chrX 53867309 53867560 -112782736 - MIRb SINE MIR -6 262 7 8 995 929 257 14 5 chrX 53867638 53867845 -112782451 - B3 SINE B2 -3 213 5 8 995 351 244 0 9 chrX 53867903 53867983 -112782313 - ID4_ SINE ID -71 81 6 8 995 295 236 163 33 chrX 53867998 53868090 -112782206 - PB1D9 SINE Alu -2 118 15 8 995 1225 68 7 0 chrX 53868283 53868429 -112781867 - B1_Mus2 SINE Alu 0 147 1 8 995 24 0 0 0 chrX 53868716 53868740 -112781556 + AT_rich Low_complexity Low_complexity 1 24 0 8 995 274 286 13 0 chrX 53869339 53869416 -112780880 + CT-rich Low_complexity Low_complexity 4 81 0 8 995 234 81 0 0 chrX 53869499 53869536 -112780760 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 995 403 260 61 55 chrX 53869809 53869972 -112780324 - Lx7 LINE L1 -16 7680 7517 8 995 2244 262 11 6 chrX 53869947 53870477 -112779819 - Lx7 LINE L1 -346 7350 6818 8 996 462 130 50 0 chrX 53870767 53870871 -112779425 + B2_Mm2 SINE B2 1 117 -81 8 996 366 23 0 0 chrX 53871606 53871649 -112778647 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 996 785 251 29 10 chrX 53871844 53872053 -112778243 + L1MB7 LINE L1 5777 5989 -195 8 996 992 261 107 4 chrX 53872061 53872323 -112777973 + B4A SINE B4 2 290 -2 8 996 522 198 118 77 chrX 53872415 53872585 -112777711 + L1MB7 LINE L1 5997 6173 -11 8 996 22 0 0 0 chrX 53872809 53872831 -112777465 + AT_rich Low_complexity Low_complexity 1 22 0 8 996 535 179 108 24 chrX 53872983 53873119 -112777177 - B1F SINE Alu -10 139 1 8 996 362 286 89 32 chrX 53873808 53873931 -112776365 - B1F2 SINE Alu -8 141 12 8 996 33 0 0 0 chrX 53873970 53874003 -112776293 + AT_rich Low_complexity Low_complexity 1 33 0 8 996 482 280 37 29 chrX 53874915 53875051 -112775245 - B1F1 SINE Alu 0 149 13 8 996 281 83 42 0 chrX 53875387 53875435 -112774861 + (CATA)n Simple_repeat Simple_repeat 4 53 0 8 996 226 273 138 27 chrX 53875435 53875623 -112774673 + L1_Mur3 LINE L1 5160 5368 -512 8 996 3954 50 32 9 chrX 53876927 53877391 -112772905 - MT2C_Mm LTR ERVL 0 475 1 8 996 612 183 208 52 chrX 53877556 53877729 -112772567 - ID_B1 SINE B4 0 224 25 8 996 382 314 16 33 chrX 53877732 53877854 -112772442 - PB1D7 SINE Alu 0 120 1 8 996 1026 290 70 53 chrX 53878160 53878437 -112771859 + L1MA4 LINE L1 5257 5526 -777 8 996 467 336 0 0 chrX 53878437 53878556 -112771740 + PB1D7 SINE Alu 2 120 0 8 996 1026 290 70 53 chrX 53878556 53878806 -112771490 + L1MA4 LINE L1 5527 5793 -510 8 996 491 143 22 0 chrX 53878806 53878897 -112771399 + (CATA)n Simple_repeat Simple_repeat 3 95 0 8 996 417 296 62 18 chrX 53878904 53879131 -112771165 + L1MA4 LINE L1 5782 6011 -280 8 996 265 330 57 0 chrX 53879614 53879720 -112770576 + PB1D9 SINE Alu 1 112 -8 8 996 211 278 0 0 chrX 53879911 53879965 -112770331 + (TG)n Simple_repeat Simple_repeat 2 55 0 8 996 529 319 37 0 chrX 53879993 53880184 -112770112 - B4A SINE B4 -94 198 1 8 996 1199 163 44 19 chrX 53880375 53880581 -112769715 + B3 SINE B2 1 211 -5 8 996 1001 226 19 9 chrX 53880619 53880833 -112769463 - B3 SINE B2 0 216 1 8 996 436 212 0 36 chrX 53882178 53882261 -112768035 - ID4_ SINE ID -1 82 3 8 996 443 303 122 57 chrX 53882407 53882743 -112767553 - L1MC LINE L1 -2119 5763 5406 8 996 1355 104 15 15 chrX 53883292 53883487 -112766809 + B2_Mm2 SINE B2 1 195 0 8 996 521 204 61 0 chrX 53884556 53884654 -112765642 - RSINE1 SINE B4 -60 105 2 8 996 21 0 0 0 chrX 53885064 53885085 -112765211 + AT_rich Low_complexity Low_complexity 1 21 0 8 996 1200 214 0 22 chrX 53885137 53885362 -112764934 + ID_B1 SINE B4 1 220 -4 8 996 295 261 0 0 chrX 53886974 53887039 -112763257 - ID_B1 SINE B4 -24 200 136 8 996 581 248 88 0 chrX 53887042 53887167 -112763129 - B3A SINE B2 -62 136 1 8 996 225 210 0 47 chrX 53889078 53889163 -112761133 + CT-rich Low_complexity Low_complexity 5 85 0 8 996 210 366 47 31 chrX 53889586 53889713 -112760583 + MIR SINE MIR 29 157 -105 8 996 392 218 0 25 chrX 53889869 53889949 -112760347 - ID2 SINE ID -1 82 5 8 996 524 278 16 87 chrX 53890026 53890211 -112760085 + B4A SINE B4 1 172 -120 8 996 1624 47 0 0 chrX 53890253 53890445 -112759851 + B2_Mm1a SINE B2 2 193 0 8 996 246 306 28 0 chrX 53890575 53890647 -112759649 + PB1D10 SINE Alu 36 109 -8 8 996 244 0 56 0 chrX 53890654 53890690 -112759606 + (CAAA)n Simple_repeat Simple_repeat 4 41 0 8 996 292 330 0 0 chrX 53890697 53890785 -112759511 - MIR SINE MIR -155 107 20 8 996 493 322 7 7 chrX 53892149 53892293 -112758003 + RSINE1 SINE B4 2 145 -20 8 996 21 36 0 0 chrX 53892295 53892323 -112757973 + AT_rich Low_complexity Low_complexity 1 28 0 8 996 654 330 128 35 chrX 53892591 53893021 -112757275 - MLT1F LTR MaLR -72 476 7 8 996 25 0 0 0 chrX 53893619 53893644 -112756652 + AT_rich Low_complexity Low_complexity 1 25 0 8 996 334 277 125 60 chrX 53893988 53894188 -112756108 - MLT1J LTR MaLR -298 214 2 8 996 244 261 21 54 chrX 53894274 53894367 -112755929 - L1MC3 LINE L1 -32 7753 7664 8 996 1309 293 77 59 chrX 53894377 53894987 -112755309 - L1MC3 LINE L1 -821 7061 6407 8 996 719 234 0 7 chrX 53895199 53895345 -112754951 - RSINE1 SINE B4 -18 147 3 8 996 223 184 60 20 chrX 53895726 53895776 -112754520 - PB1D7 SINE Alu -1 119 68 8 996 383 255 11 0 chrX 53895733 53895827 -112754469 - ID_B1 SINE B4 -7 217 123 8 996 290 268 19 23 chrX 53896824 53896932 -112753364 + L1MD LINE L1 5652 5753 -606 8 996 1494 64 0 5 chrX 53897011 53897200 -112753096 + B2_Mm2 SINE B2 1 188 -7 8 996 867 179 28 7 chrX 53897285 53897426 -112752870 - B1_Mur4 SINE Alu -5 145 2 9 996 309 308 29 118 chrX 53897430 53897566 -112752730 - PB1D7 SINE Alu -2 125 2 9 996 529 297 110 23 chrX 53897608 53897750 -112752546 + L1ME1 LINE L1 5779 5928 -251 9 996 6228 30 3 0 chrX 53897750 53898471 -112751825 - L1Md_T LINE L1 -2 6580 5858 9 996 529 297 110 23 chrX 53898471 53898628 -112751668 + L1ME1 LINE L1 5929 6104 -75 9 996 426 273 0 9 chrX 53898692 53898803 -112751493 + PB1D10 SINE Alu 7 116 -1 9 996 249 303 11 11 chrX 53899608 53899698 -112750598 - L1M5 LINE L1 -454 5670 5581 9 996 248 203 91 30 chrX 53900265 53900331 -112749965 - MIR SINE MIR -11 251 182 9 996 1508 62 5 5 chrX 53900948 53901143 -112749153 - B2_Mm2 SINE B2 0 195 1 9 996 210 267 152 22 chrX 53901611 53901703 -112748593 + MIRb SINE MIR 125 228 -40 9 996 520 305 6 67 chrX 53901843 53902008 -112748288 + MER20 DNA MER1_type 64 218 -1 9 996 310 329 50 37 chrX 53902146 53902399 -112747897 - L2c LINE L2 -227 3199 2935 9 996 236 266 73 41 chrX 53902977 53903080 -112747216 - MIRb SINE MIR -6 262 153 9 996 511 211 7 96 chrX 53903187 53903323 -112746973 + L2b LINE L2 3239 3377 -10 9 996 571 238 68 21 chrX 53903652 53903850 -112746446 - L2b LINE L2 -10 3377 3182 9 996 311 276 82 45 chrX 53905980 53906090 -112744206 + RSINE1 SINE B4 5 118 -47 9 996 360 0 0 0 chrX 53906093 53906133 -112744163 + (CA)n Simple_repeat Simple_repeat 2 41 0 9 996 428 231 22 11 chrX 53906332 53906424 -112743872 + RSINE1 SINE B4 1 93 -72 9 996 1365 89 26 5 chrX 53906504 53906695 -112743601 + B2_Mm2 SINE B2 1 195 0 9 996 388 280 100 19 chrX 53906992 53907152 -112743144 - MIR3 SINE MIR -1 207 35 9 996 201 132 0 0 chrX 53907459 53907497 -112742799 + (TG)n Simple_repeat Simple_repeat 1 38 0 9 996 566 300 36 80 chrX 53907547 53907772 -112742524 - B4 SINE B4 -77 215 1 9 996 327 192 8 62 chrX 53907776 53907904 -112742392 - Lx9 LINE L1 -2 7642 7522 9 996 305 260 14 0 chrX 53908345 53908418 -112741878 - ID4_ SINE ID -9 74 1 9 996 459 35 0 0 chrX 53909856 53909913 -112740383 + (TG)n Simple_repeat Simple_repeat 2 58 0 9 996 729 225 0 0 chrX 53909913 53910051 -112740245 - B1_Mus2 SINE Alu -9 138 1 9 996 464 278 86 0 chrX 53910288 53910439 -112739857 - RSINE1 SINE B4 0 165 2 9 996 232 294 0 93 chrX 53910467 53910542 -112739754 - PB1D10 SINE Alu -38 79 12 9 996 334 167 0 15 chrX 53910571 53910638 -112739658 - ID4 SINE ID -13 70 5 9 996 204 321 63 13 chrX 53911106 53911185 -112739111 + MIR SINE MIR 70 152 -110 9 996 387 0 0 0 chrX 53912822 53912865 -112737431 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 996 300 274 0 45 chrX 53913069 53913157 -112737139 - MLT1C LTR MaLR -140 327 244 9 996 246 156 0 0 chrX 53913593 53913638 -112736658 + (CA)n Simple_repeat Simple_repeat 2 46 0 9 996 211 336 39 23 chrX 53913919 53914047 -112736249 - L2c LINE L2 -185 3202 3073 9 996 225 191 0 0 chrX 53917447 53917489 -112732807 - MT2A LTR ERVL 0 533 492 9 996 500 176 0 21 chrX 53917494 53917587 -112732709 - MT2A LTR ERVL -435 98 8 9 996 270 0 0 0 chrX 53917601 53917631 -112732665 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 996 1309 229 179 68 chrX 53917631 53918044 -112732252 - MT2A LTR ERVL -73 460 2 9 996 240 264 0 27 chrX 53918503 53918577 -112731719 - MIRb SINE MIR -170 98 27 9 996 551 271 14 20 chrX 53918578 53918725 -112731571 - B1F1 SINE Alu -2 147 2 9 996 220 339 0 0 chrX 53919132 53919188 -112731108 + MIRb SINE MIR 26 81 -187 9 996 224 311 44 11 chrX 53919542 53919633 -112730663 - L2b LINE L2 -230 3145 3052 9 996 182 316 24 48 chrX 53919877 53919960 -112730336 - L3 LINE CR1 -321 4168 4088 9 996 180 0 0 0 chrX 53920126 53920146 -112730150 + (A)n Simple_repeat Simple_repeat 1 20 0 9 996 201 121 0 0 chrX 53920297 53920330 -112729966 + (A)n Simple_repeat Simple_repeat 1 33 0 9 996 199 233 0 0 chrX 53920515 53920558 -112729738 - MIRb SINE MIR -14 254 212 9 996 332 354 0 18 chrX 53921668 53921835 -112728461 + MLT1D LTR MaLR 115 278 -227 9 996 418 269 42 70 chrX 53921842 53921986 -112728310 + MLT1D LTR MaLR 385 543 -12 9 996 700 250 99 0 chrX 53922561 53922753 -112727543 + B3 SINE B2 6 216 0 9 996 369 0 0 0 chrX 53922933 53922974 -112727322 + (CA)n Simple_repeat Simple_repeat 1 41 0 9 996 665 278 110 22 chrX 53922975 53923333 -112726963 + L1MA5 LINE L1 5905 6295 -5 9 996 192 40 0 0 chrX 53924284 53924309 -112725987 + (TG)n Simple_repeat Simple_repeat 2 26 0 9 996 360 64 0 0 chrX 53924424 53924471 -112725825 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 996 738 257 92 19 chrX 53925824 53926086 -112724210 - L1ME1 LINE L1 -6 6173 5893 9 996 402 294 68 20 chrX 53926153 53926299 -112723997 - RSINE1 SINE B4 -9 156 4 9 996 300 211 0 40 chrX 53926403 53926477 -112723819 - L1M2 LINE L1 -590 5707 5637 9 996 2379 166 76 10 chrX 53926484 53926971 -112723325 + RMER5 LTR ERV1 16 534 0 9 996 222 37 0 0 chrX 53927470 53927497 -112722799 + (GAAA)n Simple_repeat Simple_repeat 3 29 0 9 996 4601 111 38 3 chrX 53927548 53928235 -112722061 - Lx2 LINE L1 0 6997 6287 9 996 402 256 63 16 chrX 53929396 53929523 -112720773 + MTD LTR MaLR 287 419 0 9 996 357 24 0 0 chrX 53929937 53929979 -112720317 + (TTTTG)n Simple_repeat Simple_repeat 3 44 0 9 996 752 161 0 30 chrX 53929984 53930118 -112720178 - B1_Mus1 SINE Alu -18 130 1 9 996 462 295 100 9 chrX 53930119 53930348 -112719948 + MER58B DNA MER1_type 40 289 -52 9 996 244 332 22 109 chrX 53931246 53931560 -112718736 - L2a LINE L2 -1 3425 3085 9 996 538 311 14 49 chrX 53932848 53933071 -112717225 + MER58A DNA MER1_type 1 215 -9 9 996 622 219 8 0 chrX 53933105 53933228 -112717068 - ID_B1 SINE B4 -10 214 91 9 996 261 342 27 27 chrX 53933378 53933489 -112716807 + MARNA DNA Mariner 45 155 -431 9 996 524 240 0 0 chrX 53934388 53934492 -112715804 + ID_B1 SINE B4 121 224 0 9 996 911 0 8 25 chrX 53934637 53934759 -112715537 + (TTTTG)n Simple_repeat Simple_repeat 2 121 0 9 996 294 339 44 35 chrX 53936356 53936469 -112713827 + RSINE1 SINE B4 43 156 -9 9 996 264 149 0 0 chrX 53936471 53936518 -112713778 + (CCG)n Simple_repeat Simple_repeat 2 48 0 9 996 306 304 116 32 chrX 53936745 53936996 -112713300 - L2 LINE L2 -1225 2194 1923 9 996 241 268 49 0 chrX 53937647 53937729 -112712567 - PB1D10 SINE Alu -21 96 11 9 996 315 160 103 65 chrX 53937827 53937934 -112712362 + L2a LINE L2 806 916 -2503 9 996 1925 107 81 75 chrX 53937936 53938320 -112711976 + ORR1B1 LTR MaLR 1 386 -8 9 996 1206 68 0 0 chrX 53938382 53938529 -112711767 - B1_Mus2 SINE Alu 0 147 1 9 996 22 0 0 0 chrX 53938615 53938637 -112711659 + AT_rich Low_complexity Low_complexity 1 22 0 9 996 604 324 151 52 chrX 53938699 53939408 -112710888 + L2a LINE L2 1003 1781 -1638 9 996 2275 241 130 8 chrX 53939457 53939778 -112710518 + Lx5 LINE L1 6356 6885 -575 9 996 558 0 0 0 chrX 53939778 53939840 -112710456 + (GA)n Simple_repeat Simple_repeat 2 63 0 9 996 2275 248 32 23 chrX 53939840 53940266 -112710030 + Lx5 LINE L1 6601 7024 -26 9 996 731 42 0 10 chrX 53940280 53940376 -112709920 + (GGGA)n Simple_repeat Simple_repeat 3 97 0 9 996 1157 239 98 27 chrX 53940487 53940822 -112709474 + ORR1E LTR MaLR 1 359 0 9 996 351 0 0 0 chrX 53941638 53941677 -112708619 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 9 996 658 257 7 0 chrX 53941693 53941829 -112708467 - RSINE1 SINE B4 -24 141 5 9 996 1590 106 22 47 chrX 53942022 53942298 -112707998 + Lx3B LINE L1 6705 6973 0 9 996 297 0 0 0 chrX 53942753 53942786 -112707510 + (A)n Simple_repeat Simple_repeat 1 33 0 9 996 400 226 125 19 chrX 53942826 53942930 -112707366 - PB1D9 SINE Alu -4 116 2 9 996 242 319 50 7 chrX 53942945 53943084 -112707212 - L1MC5 LINE L1 -518 7443 7299 9 996 245 347 10 10 chrX 53943459 53943558 -112706738 + L2a LINE L2 1935 2033 -1386 9 996 441 0 0 0 chrX 53943631 53943680 -112706616 + (TG)n Simple_repeat Simple_repeat 2 50 0 9 996 7601 61 18 4 chrX 53943887 53944976 -112705320 - L1Md_F2 LINE L1 -1 6581 5471 9 996 408 280 74 28 chrX 53945564 53945781 -112704515 - L1MB7 LINE L1 -22 6162 5936 9 996 430 315 121 5 chrX 53945805 53946003 -112704293 - ID_B1 SINE B4 -2 222 2 9 996 249 236 40 56 chrX 53946024 53946131 -112704165 - B1F1 SINE Alu -1 119 23 9 996 2058 44 24 0 chrX 53946266 53946514 -112703782 + L1Md_F2 LINE L1 5333 5586 -297 9 996 7536 66 22 6 chrX 53946515 53947480 -112702816 + L1Md_F2 LINE L1 5588 6567 -15 9 996 242 291 194 0 chrX 53947499 53947633 -112702663 + L2a LINE L2 2419 2578 -841 9 996 291 302 104 62 chrX 53947933 53948222 -112702074 + L2a LINE L2 2984 3284 -142 9 996 193 279 62 25 chrX 53948358 53948439 -112701857 - MIRb SINE MIR -49 219 136 9 996 321 47 0 0 chrX 53948470 53948513 -112701783 + (TTCA)n Simple_repeat Simple_repeat 4 46 0 9 996 359 341 32 0 chrX 53948525 53948651 -112701645 - RSINE1 SINE B4 -33 132 3 9 996 674 124 311 20 chrX 53948780 53948928 -112701368 - B2_Mm2 SINE B2 -3 192 2 9 996 240 35 0 0 chrX 53949531 53949560 -112700736 + (CA)n Simple_repeat Simple_repeat 2 30 0 9 996 591 15 0 0 chrX 53949560 53949627 -112700669 + (GA)n Simple_repeat Simple_repeat 2 69 0 9 996 489 260 0 0 chrX 53949694 53949790 -112700506 + B1_Mur2 SINE Alu 3 98 -51 9 996 402 174 349 0 chrX 53949828 53949914 -112700382 - PB1D9 SINE Alu -2 118 3 9 996 338 0 24 0 chrX 53950084 53950126 -112700170 + (TC)n Simple_repeat Simple_repeat 2 44 0 9 996 309 82 0 0 chrX 53950126 53950174 -112700122 + (TG)n Simple_repeat Simple_repeat 2 50 0 9 996 755 157 0 6 chrX 53950202 53950382 -112699914 + CT-rich Low_complexity Low_complexity 2 180 0 1 996 212 255 0 0 chrX 53950414 53950461 -112699835 + CT-rich Low_complexity Low_complexity 3 49 0 1 996 367 285 49 35 chrX 53950555 53950697 -112699599 - B1F1 SINE Alu 0 149 6 1 996 209 319 138 54 chrX 53950732 53950971 -112699325 - L3 LINE CR1 -234 4255 3997 1 996 191 336 103 37 chrX 53951172 53951308 -112698988 - L3 LINE CR1 -565 3924 3780 1 996 208 255 0 0 chrX 53951455 53951487 -112698809 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 996 582 60 0 0 chrX 53951487 53951570 -112698726 + (CA)n Simple_repeat Simple_repeat 2 84 0 1 996 208 255 0 0 chrX 53951570 53951584 -112698712 + (TA)n Simple_repeat Simple_repeat 2 15 0 1 996 721 289 80 57 chrX 53951584 53952094 -112698202 - L1ME3A LINE L1 -87 6086 5565 1 996 438 229 43 71 chrX 53952141 53952157 -112698139 + B1F1 SINE Alu 13 144 0 1 996 608 202 0 8 chrX 53952157 53952277 -112698019 + ID_B1 SINE B4 104 222 -2 1 996 502 276 26 0 chrX 53952306 53952462 -112697834 + MLT2C1 LTR ERVL 1 160 -237 1 996 1343 104 5 49 chrX 53952446 53952669 -112697627 + URR1A DNA MER1_type 8 220 -6 1 996 291 287 69 15 chrX 53952804 53952935 -112697361 - MLT2B4 LTR ERVL -410 146 9 1 996 752 257 17 28 chrX 53952958 53953190 -112697106 + L1MA4A LINE L1 5714 5938 -365 1 996 321 304 162 28 chrX 53953355 53953639 -112696657 + MLT1C LTR MaLR 110 431 -36 1 996 530 310 163 17 chrX 53954172 53954589 -112695707 + L2a LINE L2 2947 3424 -2 1 996 217 314 14 28 chrX 53954729 53954801 -112695495 - L2c LINE L2 -233 3154 3084 1 996 402 273 178 6 chrX 53954899 53955065 -112695231 + B3A SINE B2 11 186 -12 1 996 277 284 0 24 chrX 53955071 53955154 -112695142 + GA-rich Low_complexity Low_complexity 1 81 0 1 996 233 326 0 31 chrX 53955245 53955343 -112694953 + GA-rich Low_complexity Low_complexity 1 95 0 1 996 525 302 64 39 chrX 53956132 53956335 -112693961 - ID_B1 SINE B4 -15 209 2 1 996 1732 186 67 11 chrX 53956348 53956706 -112693590 - ORR1C2 LTR MaLR -4 380 3 1 996 528 16 0 0 chrX 53956754 53956815 -112693481 + (TCTA)n Simple_repeat Simple_repeat 1 61 0 1 996 310 309 24 24 chrX 53957622 53957748 -112692548 - MLT1N2 LTR MaLR -9 553 428 1 996 230 294 39 113 chrX 53957935 53958138 -112692158 - MLT1N2 LTR MaLR -321 241 54 1 996 204 281 16 0 chrX 53958164 53958228 -112692068 + CT-rich Low_complexity Low_complexity 3 67 0 1 996 188 295 44 33 chrX 53958278 53958369 -112691927 + L2 LINE L2 2267 2358 -1061 1 996 990 52 0 7 chrX 53958396 53958533 -112691763 - B1_Mus2 SINE Alu -2 145 10 1 996 237 310 93 60 chrX 53959267 53959418 -112690878 + L2 LINE L2 2749 2904 -515 1 996 2241 240 112 11 chrX 53959645 53959760 -112690536 - Lx8 LINE L1 -553 6920 6789 1 996 453 19 0 0 chrX 53959760 53959814 -112690482 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 1 996 2241 240 112 11 chrX 53959814 53960258 -112690038 - Lx8 LINE L1 -685 6788 6304 1 996 221 305 17 0 chrX 53960336 53960395 -112689901 + ID4 SINE ID 24 83 0 1 996 318 261 34 101 chrX 53960402 53960551 -112689745 - L1ME3 LINE L1 -3 6159 6021 1 996 714 76 102 0 chrX 53960601 53960719 -112689577 - B2_Mm2 SINE B2 -8 187 58 1 996 1049 264 45 56 chrX 53960764 53961190 -112689106 - L1ME3 LINE L1 -446 5718 5298 1 996 402 271 18 27 chrX 53961292 53961402 -112688894 - PB1D9 SINE Alu -10 110 2 1 996 334 331 16 47 chrX 53961405 53961532 -112688764 - L1ME3 LINE L1 -984 5162 5040 1 996 930 127 14 7 chrX 53961544 53961687 -112688609 - B1_Mus1 SINE Alu 0 148 5 1 996 25 0 0 0 chrX 53961689 53961714 -112688582 + AT_rich Low_complexity Low_complexity 1 25 0 1 996 1123 207 117 24 chrX 53963364 53963725 -112686571 + MTD LTR MaLR 10 405 -14 1 996 626 238 208 6 chrX 53964251 53964424 -112685872 - B3 SINE B2 -8 208 1 1 996 690 279 22 0 chrX 53964909 53965088 -112685208 - ID_B1 SINE B4 -21 203 21 1 996 378 132 176 0 chrX 53965125 53965193 -112685103 + ID4_ SINE ID 2 81 -2 1 996 318 179 75 0 chrX 53965918 53965985 -112684311 - L2a LINE L2 -56 3370 3299 1 996 255 258 108 0 chrX 53966850 53966943 -112683353 - HAL1 LINE L1 -734 1773 1671 1 996 250 207 108 12 chrX 53967320 53967403 -112682893 - HAL1 LINE L1 -855 1652 1562 1 996 236 297 99 25 chrX 53967452 53967573 -112682723 - RSINE1 SINE B4 -33 132 3 1 996 273 298 0 0 chrX 53967615 53967672 -112682624 - RSINE1 SINE B4 0 165 109 1 996 241 253 77 44 chrX 53967840 53967931 -112682365 - L1M3 LINE L1 -272 5906 5813 1 996 457 326 21 14 chrX 53968498 53968641 -112681655 + RSINE1 SINE B4 22 165 0 1 996 623 296 11 15 chrX 53968718 53968883 -112681413 - ID_B1 SINE B4 -45 247 83 1 996 302 267 75 9 chrX 53968888 53968994 -112681302 - L1M3 LINE L1 -370 5808 5696 1 996 1002 97 0 0 chrX 53969005 53969149 -112681147 + (TTCC)n Simple_repeat Simple_repeat 3 146 0 1 996 267 31 0 0 chrX 53969152 53969184 -112681112 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 996 671 240 0 0 chrX 53969184 53969313 -112680983 - B1_Mus1 SINE Alu -19 129 1 1 996 884 261 72 4 chrX 53969453 53969718 -112680578 - L1M3 LINE L1 -572 5608 5326 1 996 456 261 153 5 chrX 53969737 53969953 -112680343 - L1MB3 LINE L1 -14 6169 5922 1 996 219 36 0 0 chrX 53970163 53970191 -112680105 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 1 996 585 261 42 0 chrX 53970191 53970333 -112679963 - B1_Mur4 SINE Alu -2 148 1 1 996 464 288 0 41 chrX 53971301 53971424 -112678872 + MER102b DNA MER1_type 19 136 -205 1 996 2035 148 118 7 chrX 53972501 53972909 -112677387 + Lx5 LINE L1 5925 6377 -673 1 996 1058 88 13 51 chrX 53972909 53973065 -112677231 + B1_Mur4 SINE Alu 1 150 0 1 996 267 54 0 0 chrX 53973065 53973102 -112677194 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 1 996 180 0 0 0 chrX 53973102 53973122 -112677174 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1 996 604 97 298 0 chrX 53973241 53973355 -112676941 + B1_Mus1 SINE Alu 1 148 0 1 996 321 136 0 0 chrX 53973369 53973378 -112676918 + (GAAA)n Simple_repeat Simple_repeat 3 11 0 1 996 3886 183 13 6 chrX 53973378 53974060 -112676236 + Lx5 LINE L1 6364 7050 0 1 996 321 136 0 0 chrX 53974060 53974109 -112676187 + (GAAA)n Simple_repeat Simple_repeat 4 52 0 1 996 333 0 0 0 chrX 53976638 53976675 -112673621 + (CAA)n Simple_repeat Simple_repeat 3 39 0 1 996 27 29 0 0 chrX 53977316 53977350 -112672946 + AT_rich Low_complexity Low_complexity 1 34 0 1 996 518 214 159 0 chrX 53977381 53977563 -112672733 + L1M4 LINE L1 4272 4482 -1664 1 996 443 310 9 0 chrX 53978083 53978199 -112672097 + ID_B1 SINE B4 81 197 -27 1 996 309 68 0 0 chrX 53978202 53978246 -112672050 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1 996 598 210 35 42 chrX 53978249 53978393 -112671903 + U1 snRNA snRNA 1 143 -22 1 996 647 280 48 50 chrX 53978470 53978827 -112671469 + Charlie2b DNA MER1_type 2422 2777 -5 1 996 180 0 0 0 chrX 53979450 53979470 -112670826 + (T)n Simple_repeat Simple_repeat 1 20 0 1 996 7762 22 0 0 chrX 53979954 53980828 -112669468 - L1Md_A LINE L1 -12 6570 5697 1 996 180 0 0 0 chrX 53980886 53980906 -112669390 + (T)n Simple_repeat Simple_repeat 1 20 0 1 996 197 222 0 0 chrX 53981462 53981507 -112668789 + MIR SINE MIR 110 154 -108 1 996 203 138 0 0 chrX 53981560 53981589 -112668707 + (TC)n Simple_repeat Simple_repeat 1 29 0 1 996 210 105 0 0 chrX 53982285 53982323 -112667973 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 996 202 309 0 0 chrX 53984142 53984197 -112666099 + L2a LINE L2 3352 3406 -20 1 996 294 29 0 0 chrX 53984836 53984871 -112665425 + (CCCCCG)n Simple_repeat Simple_repeat 6 40 0 1 996 762 69 0 0 chrX 53985085 53985186 -112665110 + (TG)n Simple_repeat Simple_repeat 1 101 0 1 996 192 135 0 0 chrX 53985522 53985559 -112664737 + (T)n Simple_repeat Simple_repeat 1 37 0 1 996 270 56 0 0 chrX 53986183 53986219 -112664077 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 996 253 291 25 12 chrX 53987642 53987722 -112662574 - ID4 SINE ID -1 82 2 1 996 225 0 0 0 chrX 53987964 53987989 -112662307 + (T)n Simple_repeat Simple_repeat 1 25 0 1 996 679 254 12 6 chrX 53988576 53988742 -112661554 + MER2 DNA MER2_type 160 326 -19 1 996 717 155 23 0 chrX 53988936 53989065 -112661231 - B1_Mur1 SINE Alu 0 149 18 1 996 434 235 8 32 chrX 53989406 53989529 -112660767 + MER20 DNA MER1_type 91 210 -9 1 996 481 214 16 49 chrX 53990219 53990342 -112659954 + PB1D9 SINE Alu 2 120 0 1 996 876 164 0 0 chrX 53990474 53990651 -112659645 + GA-rich Low_complexity Low_complexity 2 178 0 1 996 234 273 45 28 chrX 53991121 53991298 -112658998 - RMER17C LTR ERVK -111 299 120 1 996 283 233 27 0 chrX 53991548 53991621 -112658675 - ID4 SINE ID -2 81 7 1 996 1638 37 0 0 chrX 53991729 53991919 -112658377 + B2_Mm1a SINE B2 1 190 -3 1 996 765 95 94 7 chrX 53991990 53992128 -112658168 - URR1A DNA MER1_type 0 226 77 1 996 213 162 0 0 chrX 53992470 53992507 -112657789 - MIR SINE MIR -58 150 114 1 996 1123 88 53 37 chrX 53992613 53992802 -112657494 - B2_Mm2 SINE B2 0 195 4 1 996 260 322 11 22 chrX 53992882 53992971 -112657325 + B4 SINE B4 108 195 -97 1 996 1700 5 0 21 chrX 53992987 53993179 -112657117 - B2_Mm1a SINE B2 -4 189 2 1 996 911 245 24 5 chrX 53993444 53993653 -112656643 + B3 SINE B2 1 213 -3 1 996 2401 50 20 0 chrX 53993658 53993957 -112656339 - L1_Mus2 LINE L1 -248 6318 6014 1 996 1809 44 29 81 chrX 53993965 53994237 -112656059 + L1_Mus2 LINE L1 6308 6565 -1 1 996 468 322 5 83 chrX 53994285 53994478 -112655818 + B3A SINE B2 2 179 -19 1 996 776 128 8 0 chrX 53994503 53994636 -112655660 + (GA)n Simple_repeat Simple_repeat 1 134 0 1 996 312 27 0 0 chrX 53994998 53995035 -112655261 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 996 269 275 9 21 chrX 53995568 53995679 -112654617 - PB1D7 SINE Alu 0 120 11 1 996 216 0 0 0 chrX 53996163 53996187 -112654109 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 996 432 0 0 0 chrX 53996187 53996234 -112654062 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 996 455 204 97 0 chrX 53996354 53996457 -112653839 + PB1D10 SINE Alu 5 117 0 1 996 280 264 0 0 chrX 53997044 53997116 -112653180 + tRNA-Ala-GCY_ tRNA tRNA 1 72 -3 1 996 405 0 0 0 chrX 53997555 53997600 -112652696 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 996 507 315 108 0 chrX 53998667 53998889 -112651407 - MER2 DNA MER2_type -95 250 5 1 996 467 214 128 53 chrX 53999863 53999996 -112650300 + B1_Mur2 SINE Alu 2 144 -5 1 996 355 246 13 118 chrX 54000108 54000260 -112650036 + MER5A DNA MER1_type 1 136 -53 1 996 761 301 59 14 chrX 54000405 54000695 -112649601 - MLT1A1 LTR MaLR -16 392 90 2 996 513 275 50 35 chrX 54000865 54001065 -112649231 - MLT1A1 LTR MaLR -205 203 1 3 996 579 278 67 5 chrX 54001378 54001573 -112648723 + B3 SINE B2 1 207 -9 4 124 682 97 266 0 chrX 54001593 54001717 -112648579 + B2_Mm2 SINE B2 2 158 -37 5 997 222 37 0 0 chrX 54001718 54001745 -112648551 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 6 997 928 241 39 9 chrX 54002901 54003131 -112647165 + B4A SINE B4 2 238 -54 7 997 376 188 12 0 chrX 54003211 54003291 -112647005 + U6 snRNA snRNA 26 106 -1 8 997 770 169 0 0 chrX 54003314 54003438 -112646858 - B1_Mur3 SINE Alu -8 141 18 9 997 1186 77 6 0 chrX 54003676 54003687 -112646609 - B2_Mm2 SINE B2 -24 171 160 1 997 186 43 0 0 chrX 54003687 54003710 -112646586 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 997 1186 77 6 0 chrX 54003710 54003867 -112646429 - B2_Mm2 SINE B2 -36 159 3 1 997 1387 272 18 25 chrX 54005959 54006355 -112643941 - Lx5 LINE L1 0 7050 6658 1 997 392 287 17 9 chrX 54006669 54006785 -112643511 + PB1D10 SINE Alu 1 117 0 1 997 880 214 112 0 chrX 54008948 54009135 -112641161 - B3 SINE B2 -7 209 2 1 997 533 274 45 40 chrX 54009475 54009726 -112640570 + MER102b DNA MER1_type 5 282 -59 1 997 375 121 0 0 chrX 54010587 54010645 -112639651 + (TATATG)n Simple_repeat Simple_repeat 3 60 0 1 997 405 0 0 0 chrX 54011817 54011862 -112638434 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 997 517 255 104 21 chrX 54011862 54012006 -112638290 - B3 SINE B2 -52 164 9 1 997 1278 27 0 0 chrX 54012245 54012392 -112637904 - B1_Mm SINE Alu 0 147 1 1 997 24 0 0 0 chrX 54012402 54012426 -112637870 + AT_rich Low_complexity Low_complexity 1 24 0 2 997 907 211 67 0 chrX 54014125 54014305 -112635991 - B3 SINE B2 -24 192 1 2 997 641 255 70 40 chrX 54015592 54015792 -112634504 - ID_B1 SINE B4 0 224 19 2 997 227 290 0 0 chrX 54018355 54018417 -112631879 - MIRc SINE MIR -78 190 129 2 997 402 309 7 41 chrX 54018627 54018772 -112631524 - B1F2 SINE Alu 0 149 10 2 997 389 274 2 39 chrX 54018775 54018916 -112631380 - Lx7 LINE L1 -669 7027 6904 2 997 266 250 0 14 chrX 54020350 54020419 -112629877 + PB1D10 SINE Alu 41 108 -9 2 997 789 147 58 7 chrX 54020506 54020643 -112629653 - B1_Mur2 SINE Alu 0 149 6 2 997 512 241 60 0 chrX 54020674 54020790 -112629506 + RSINE1 SINE B4 3 125 -40 2 997 499 273 77 23 chrX 54020827 54021048 -112629248 + L1MB7 LINE L1 5652 5884 -300 2 997 2181 141 46 20 chrX 54021090 54021481 -112628815 - MTC LTR MaLR -20 401 1 3 997 646 263 79 9 chrX 54021481 54021696 -112628600 + L1MB7 LINE L1 5900 6129 -55 2 997 441 0 0 0 chrX 54021796 54021845 -112628451 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 997 696 75 0 0 chrX 54021846 54021939 -112628357 - B1_Mus1 SINE Alu -40 108 16 3 997 511 331 58 4 chrX 54023364 54023604 -112626692 - MIR SINE MIR -4 258 6 3 997 575 314 16 0 chrX 54023923 54024111 -112626185 + B3 SINE B2 1 191 -25 3 997 348 83 0 0 chrX 54024113 54024161 -112626135 + (CATA)n Simple_repeat Simple_repeat 3 50 0 3 997 353 263 0 0 chrX 54025653 54025729 -112624567 + ID4_ SINE ID 8 83 0 3 997 306 271 11 34 chrX 54025729 54025741 -112624555 + ID_B1 SINE B4 8 93 -131 3 997 3822 41 0 11 chrX 54027822 54028287 -112622009 - L1Md_F2 LINE L1 0 6582 6123 3 997 3105 281 94 12 chrX 54029102 54030149 -112620147 - Lx8 LINE L1 -6 7467 6336 3 997 5134 42 32 0 chrX 54031044 54031664 -112618632 + L1Md_F2 LINE L1 5943 6582 0 4 997 29 0 0 0 chrX 54033822 54033851 -112616445 + AT_rich Low_complexity Low_complexity 1 29 0 4 997 203 152 22 0 chrX 54034205 54034251 -112616045 + (TAA)n Simple_repeat Simple_repeat 3 49 0 4 997 633 107 18 9 chrX 54034699 54034812 -112615484 - B1_Mus1 SINE Alu 0 148 35 4 997 213 39 0 0 chrX 54035136 54035162 -112615134 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 997 267 325 0 0 chrX 54035751 54035828 -112614468 + (TG)n Simple_repeat Simple_repeat 2 78 0 4 997 392 265 266 13 chrX 54035836 54036068 -112614228 - B4A SINE B4 -1 291 1 4 997 570 15 0 0 chrX 54036143 54036210 -112614086 + (TC)n Simple_repeat Simple_repeat 2 68 0 4 997 499 164 269 25 chrX 54037762 54037881 -112612415 + B1_Mur4 SINE Alu 1 148 -2 4 997 242 277 45 15 chrX 54038100 54038166 -112612130 - RMER30 DNA MER1_type -2 200 133 4 997 334 333 29 29 chrX 54038294 54038399 -112611897 + PB1D7 SINE Alu 15 119 -1 5 997 300 289 41 10 chrX 54038902 54039000 -112611296 - B1F1 SINE Alu -38 111 11 5 997 207 0 0 0 chrX 54040201 54040224 -112610072 + (T)n Simple_repeat Simple_repeat 1 23 0 5 997 180 250 0 0 chrX 54042589 54042637 -112607659 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 997 516 191 91 0 chrX 54043270 54043380 -112606916 - MIRc SINE MIR -36 232 113 5 997 482 214 0 41 chrX 54043478 54043600 -112606696 + MIRb SINE MIR 114 230 -38 5 997 22 0 0 0 chrX 54044254 54044276 -112606020 + AT_rich Low_complexity Low_complexity 1 22 0 5 997 26 30 0 0 chrX 54045948 54045981 -112604315 + AT_rich Low_complexity Low_complexity 1 33 0 5 997 897 85 0 0 chrX 54047476 54047606 -112602690 + B2_Mm2 SINE B2 1 130 -65 5 997 21 36 0 0 chrX 54047610 54047638 -112602658 + AT_rich Low_complexity Low_complexity 1 28 0 5 997 217 284 0 29 chrX 54048511 54048580 -112601716 - PB1D10 SINE Alu -48 69 3 6 997 383 340 53 33 chrX 54048609 54048761 -112601535 + RSINE1 SINE B4 4 158 -7 6 997 877 265 37 17 chrX 54048915 54049187 -112601109 + B4 SINE B4 4 292 0 6 997 186 189 0 0 chrX 54049190 54049227 -112601069 + (CATATA)n Simple_repeat Simple_repeat 2 38 0 6 997 243 229 49 0 chrX 54049483 54049544 -112600752 + GA-rich Low_complexity Low_complexity 4 67 0 6 997 1005 102 0 26 chrX 54049656 54049807 -112600489 + B1_Mus1 SINE Alu 2 148 0 6 997 480 111 0 0 chrX 54050303 54050375 -112599921 + (TG)n Simple_repeat Simple_repeat 2 73 0 6 997 797 247 42 80 chrX 54051537 54051722 -112598574 - B4A SINE B4 -18 274 96 6 997 974 92 0 34 chrX 54051722 54051868 -112598428 - B1_Mus1 SINE Alu -6 142 2 6 997 797 247 42 80 chrX 54051868 54051946 -112598350 - B4A SINE B4 -197 95 21 6 997 578 14 14 0 chrX 54051977 54052048 -112598248 + (TC)n Simple_repeat Simple_repeat 1 72 0 6 997 835 168 13 40 chrX 54052061 54052210 -112598086 - B1_Mur4 SINE Alu -5 145 1 7 997 306 164 0 0 chrX 54053089 54053144 -112597152 + (TG)n Simple_repeat Simple_repeat 1 55 0 7 997 700 299 71 60 chrX 54053170 54053437 -112596859 - B4A SINE B4 -22 270 1 7 997 546 181 0 0 chrX 54053551 54053656 -112596640 + (TA)n Simple_repeat Simple_repeat 1 105 0 7 997 220 39 0 0 chrX 54053658 54053684 -112596612 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 997 195 276 58 48 chrX 54053929 54054032 -112596264 + MIR SINE MIR 83 186 -76 7 997 600 240 84 35 chrX 54055410 54055695 -112594601 + RLTR20D LTR ERVK 1 479 -89 7 997 252 0 0 0 chrX 54055695 54055723 -112594573 + (TTG)n Simple_repeat Simple_repeat 2 29 0 7 997 600 231 25 43 chrX 54055723 54055814 -112594482 + RLTR20D LTR ERVK 480 566 -2 7 997 1240 35 0 0 chrX 54055920 54056065 -112594231 + B1_Mus2 SINE Alu 1 145 -2 7 997 331 299 93 19 chrX 54056500 54056705 -112593591 + L1M5 LINE L1 5260 5479 -694 7 997 1211 173 33 5 chrX 54057842 54058057 -112592239 - URR1A DNA MER1_type 0 226 6 8 997 1268 94 66 0 chrX 54058066 54058247 -112592049 + B2_Mm2 SINE B2 2 194 -1 8 997 3449 48 5 5 chrX 54059064 54059460 -112590836 + MTA_Mm LTR MaLR 1 396 0 8 997 1323 34 0 0 chrX 54059557 54059704 -112590592 + B1_Mus2 SINE Alu 1 147 0 8 997 204 40 0 0 chrX 54059704 54059729 -112590567 + (A)n Simple_repeat Simple_repeat 1 25 0 8 997 1501 60 16 6 chrX 54059812 54059995 -112590301 + B2_Mm2 SINE B2 2 186 -9 8 997 184 190 0 49 chrX 54060426 54060487 -112589809 + CT-rich Low_complexity Low_complexity 4 61 0 8 997 269 109 0 21 chrX 54060479 54060526 -112589770 + (TCC)n Simple_repeat Simple_repeat 1 46 0 8 997 997 56 6 90 chrX 54060537 54060693 -112589603 - B1_Mus1 SINE Alu 0 148 6 8 997 987 79 7 13 chrX 54060695 54060848 -112589448 + (TTTC)n Simple_repeat Simple_repeat 2 153 0 8 997 1424 176 68 95 chrX 54061259 54061643 -112588653 - ORR1A4 LTR MaLR -8 321 1 9 997 31 0 0 0 chrX 54061990 54062021 -112588275 + AT_rich Low_complexity Low_complexity 1 31 0 9 997 557 244 79 31 chrX 54062038 54062165 -112588131 - B1_Mur2 SINE Alu -16 133 1 9 997 1371 106 0 16 chrX 54063534 54063725 -112586571 + B2_Mm2 SINE B2 1 188 -7 9 997 603 160 38 0 chrX 54064900 54065006 -112585290 + RMER6A LTR ERVK 1 110 -646 9 997 628 185 82 0 chrX 54064995 54065130 -112585166 + MTD LTR MaLR 260 405 -14 9 997 235 319 14 48 chrX 54065219 54065234 -112585062 + B4A SINE B4 74 87 -205 9 997 1490 88 0 10 chrX 54065234 54065429 -112584867 + B2_Mm2 SINE B2 1 193 -2 9 997 235 319 14 48 chrX 54065429 54065558 -112584738 + B4A SINE B4 88 213 -79 9 997 493 246 67 7 chrX 54065432 54065567 -112584729 + B1F SINE Alu 6 148 -1 9 997 312 48 0 0 chrX 54065567 54065609 -112584687 + (CAAT)n Simple_repeat Simple_repeat 2 43 0 9 997 590 242 32 51 chrX 54065663 54065820 -112584476 + RSINE1 SINE B4 2 155 -10 1 997 446 207 132 123 chrX 54065992 54066212 -112584084 - Lx9 LINE L1 -7 7637 7416 1 997 1365 71 66 0 chrX 54066220 54066402 -112583894 - B2_Mm2 SINE B2 -1 194 1 1 997 1281 127 0 16 chrX 54066684 54066868 -112583428 + B2_Mm2 SINE B2 1 181 -14 1 997 1303 34 7 0 chrX 54066871 54067018 -112583278 + B1_Mus1 SINE Alu 1 148 0 1 997 258 32 0 0 chrX 54067018 54067049 -112583247 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 1 997 261 0 0 0 chrX 54067479 54067508 -112582788 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 1 997 655 78 125 19 chrX 54067684 54067788 -112582508 + B1_Mur4 SINE Alu 35 149 -1 1 997 518 15 15 0 chrX 54067919 54067984 -112582312 - L1_Mus2 LINE L1 0 6566 6501 1 997 405 260 10 30 chrX 54068323 54068422 -112581874 - B4 SINE B4 -192 100 4 1 997 26 0 0 0 chrX 54068483 54068509 -112581787 + AT_rich Low_complexity Low_complexity 1 26 0 1 997 190 318 0 96 chrX 54069015 54069088 -112581208 + L4 LINE RTE 1768 1833 -196 1 997 192 152 0 0 chrX 54069723 54069756 -112580540 + T-rich Low_complexity Low_complexity 1 33 0 1 997 1217 68 7 0 chrX 54069756 54069902 -112580394 - B1_Mus2 SINE Alu 0 147 1 1 997 1101 155 32 11 chrX 54070802 54070991 -112579305 + B2_Mm2 SINE B2 2 194 -1 1 997 1445 74 20 35 chrX 54071037 54071234 -112579062 + B2_Mm2 SINE B2 2 195 0 1 997 32 26 0 0 chrX 54071744 54071783 -112578513 + AT_rich Low_complexity Low_complexity 1 39 0 1 997 1307 35 0 0 chrX 54072228 54072372 -112577924 + B1_Mus2 SINE Alu 3 146 -1 1 997 831 134 0 38 chrX 54072611 54072743 -112577553 + B1_Mus1 SINE Alu 4 130 -18 1 997 748 230 109 5 chrX 54072849 54073041 -112577255 + B3 SINE B2 2 213 -3 1 997 263 282 133 30 chrX 54076164 54076299 -112573997 - MIR SINE MIR -68 194 46 1 997 477 253 171 24 chrX 54076367 54076537 -112573759 + B3A SINE B2 1 195 -3 1 997 1441 111 0 5 chrX 54076539 54076729 -112573567 + B2_Mm2 SINE B2 1 189 -6 1 997 1086 107 0 0 chrX 54077340 54077480 -112572816 + B1_Mur4 SINE Alu 2 141 -9 1 997 312 120 0 0 chrX 54077480 54077530 -112572766 + (TAG)n Simple_repeat Simple_repeat 1 50 0 1 997 227 320 90 0 chrX 54077551 54077629 -112572667 + ID SINE ID 5 89 -135 1 997 245 311 19 75 chrX 54077636 54077746 -112572550 + L1MC4 LINE L1 7704 7815 -227 1 997 1039 83 6 6 chrX 54077746 54077903 -112572393 + (TTTC)n Simple_repeat Simple_repeat 2 158 0 1 997 1220 37 0 0 chrX 54077903 54078038 -112572258 - B1_Mus1 SINE Alu -12 136 2 1 997 245 311 19 75 chrX 54078038 54078086 -112572210 + L1MC4 LINE L1 7816 7853 -189 1 997 785 207 101 25 chrX 54078285 54078483 -112571813 - B3 SINE B2 -1 215 3 1 997 817 135 0 8 chrX 54078611 54078738 -112571558 - B1_Mus2 SINE Alu 0 147 22 1 997 1157 198 82 19 chrX 54078905 54079173 -112571123 + Lx4B LINE L1 6770 7054 -4 1 997 234 0 0 0 chrX 54079411 54079437 -112570859 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 997 938 201 21 21 chrX 54079634 54079822 -112570474 - B3 SINE B2 -2 214 27 1 997 463 333 0 0 chrX 54080003 54080111 -112570185 - PB1D10 SINE Alu -8 109 2 1 997 225 271 51 0 chrX 54082335 54082394 -112567902 - MER5A DNA MER1_type -28 161 100 1 997 620 111 0 10 chrX 54082562 54082662 -112567634 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 1 997 1035 39 130 8 chrX 54082674 54082805 -112567491 - B1_Mus2 SINE Alu 0 147 1 1 997 1176 95 0 0 chrX 54084198 54084345 -112565951 + B1_Mus1 SINE Alu 2 148 0 1 997 954 136 0 0 chrX 54084353 54084508 -112565788 + (GAA)n Simple_repeat Simple_repeat 2 156 0 1 997 208 314 140 0 chrX 54085068 54085175 -112565121 + MIR SINE MIR 28 156 -106 1 997 402 203 51 2 chrX 54085361 54085457 -112564839 - B1_Mur1 SINE Alu -9 140 3 1 997 731 75 0 19 chrX 54085559 54085667 -112564629 + (GGAGA)n Simple_repeat Simple_repeat 4 109 0 1 997 3711 43 40 18 chrX 54085939 54086390 -112563906 - L1Md_F2 LINE L1 -14 6568 6108 1 997 6397 45 28 0 chrX 54086540 54087290 -112563006 + L1Md_F3 LINE L1 5814 6584 0 1 997 1271 78 0 11 chrX 54087763 54087945 -112562351 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 997 434 101 14 0 chrX 54087951 54088020 -112562276 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 1 997 752 213 15 7 chrX 54088030 54088167 -112562129 - B1_Mus1 SINE Alu 0 148 11 1 997 222 303 134 27 chrX 54088313 54088425 -112561871 - MIRc SINE MIR -119 149 26 1 997 210 71 0 0 chrX 54088517 54088545 -112561751 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1 997 278 26 0 25 chrX 54088831 54088871 -112561425 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 997 468 252 142 0 chrX 54089409 54089536 -112560760 - B1F1 SINE Alu 0 149 5 1 997 296 246 14 14 chrX 54089678 54089752 -112560544 - MIRb SINE MIR -81 187 114 1 997 308 309 104 16 chrX 54089767 54089892 -112560404 + RSINE1 SINE B4 17 152 -13 1 997 343 296 9 9 chrX 54090091 54090200 -112560096 - PB1 SINE Alu 0 127 19 1 997 1784 26 0 0 chrX 54090312 54090503 -112559793 + B2_Mm1a SINE B2 2 192 -1 1 997 306 98 34 51 chrX 54090587 54090705 -112559591 + (TAAA)n Simple_repeat Simple_repeat 1 116 0 1 997 359 209 183 43 chrX 54090762 54090877 -112559419 - B1_Mur1 SINE Alu -6 143 13 1 997 234 0 0 0 chrX 54090892 54090918 -112559378 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 997 1036 86 7 60 chrX 54090920 54091069 -112559227 - B1_Mus1 SINE Alu -6 142 2 1 997 705 263 49 29 chrX 54091081 54091285 -112559011 - B3 SINE B2 -8 208 1 1 997 826 21 0 0 chrX 54091558 54091653 -112558643 - L1Md_F3 LINE L1 -403 6181 6087 1 997 3348 41 5 8 chrX 54091653 54092048 -112558248 + L1Md_F3 LINE L1 6191 6584 0 1 997 288 53 0 0 chrX 54092609 54092647 -112557649 + (CAACC)n Simple_repeat Simple_repeat 1 38 0 1 997 204 73 0 89 chrX 54092653 54092698 -112557598 + A-rich Low_complexity Low_complexity 4 44 0 1 997 869 130 6 110 chrX 54092893 54093057 -112557239 - B1_Mus1 SINE Alu -1 147 1 1 997 719 94 9 0 chrX 54093058 54093164 -112557132 - B1_Mus2 SINE Alu 0 147 41 1 997 230 221 55 154 chrX 54093101 54093192 -112557104 - RLTR25B LTR ERVK -519 509 428 1 997 351 0 0 0 chrX 54093233 54093272 -112557024 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 997 204 40 0 0 chrX 54093274 54093299 -112556997 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 997 689 296 6 12 chrX 54093299 54093470 -112556826 - B3A SINE B2 -23 175 6 1 997 439 309 22 7 chrX 54094038 54094175 -112556121 - B1F2 SINE Alu -10 139 1 1 997 251 233 100 0 chrX 54094359 54094419 -112555877 - MIRc SINE MIR -120 148 83 1 997 979 232 33 37 chrX 54095308 54095523 -112554773 + B3 SINE B2 1 214 -2 1 997 369 0 0 0 chrX 54095782 54095823 -112554473 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 997 1228 81 0 0 chrX 54095985 54096133 -112554163 - B1_Mus1 SINE Alu 0 148 1 1 997 649 296 5 11 chrX 54096500 54096688 -112553608 + L1M5 LINE L1 5369 5555 -624 1 997 24 32 0 0 chrX 54099573 54099604 -112550692 + AT_rich Low_complexity Low_complexity 1 31 0 1 997 881 182 7 7 chrX 54100431 54100575 -112549721 - B1_Mus2 SINE Alu -2 145 2 1 997 214 296 19 0 chrX 54101122 54101176 -112549120 + ID4 SINE ID 2 56 -27 1 997 618 275 39 78 chrX 54101732 54101937 -112548359 + B3A SINE B2 2 198 0 1 997 294 111 0 0 chrX 54102798 54102826 -112547470 + (T)n Simple_repeat Simple_repeat 1 28 0 1 997 589 108 175 10 chrX 54102826 54102929 -112547367 - PB1D9 SINE Alu 0 120 1 1 997 294 111 0 0 chrX 54102929 54102954 -112547342 + (T)n Simple_repeat Simple_repeat 1 25 0 1 997 668 160 1 62 chrX 54102985 54103137 -112547159 - B1_Mm SINE Alu -9 139 1 1 997 347 280 9 27 chrX 54103881 54103991 -112546305 + CT-rich Low_complexity Low_complexity 1 108 0 1 997 2231 44 0 0 chrX 54104467 54104718 -112545578 - L1_Mus1 LINE L1 0 6567 6317 1 997 2674 43 3 52 chrX 54107119 54107306 -112542990 + ORR1A1 LTR MaLR 1 187 -159 1 997 4011 76 0 0 chrX 54107306 54107795 -112542501 + L1Md_T LINE L1 6094 6582 0 1 997 2674 43 3 52 chrX 54107795 54107971 -112542325 + ORR1A1 LTR MaLR 188 346 0 1 997 500 243 144 101 chrX 54108220 54108408 -112541888 + B3A SINE B2 3 198 0 1 997 271 318 30 0 chrX 54108528 54108594 -112541702 + tRNA-Ala-GCY_ tRNA tRNA 1 68 -7 1 997 436 221 7 7 chrX 54108767 54108922 -112541374 + (TA)n Simple_repeat Simple_repeat 2 156 0 1 997 500 179 0 0 chrX 54108942 54109026 -112541270 + B1_Mur1 SINE Alu 60 143 -6 1 997 1012 110 20 20 chrX 54109063 54109212 -112541084 + B1_Mur4 SINE Alu 2 150 0 1 997 266 0 0 29 chrX 54109218 54109253 -112541043 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 1 997 357 24 0 0 chrX 54109253 54109294 -112541002 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 1 997 1245 54 0 0 chrX 54110160 54110308 -112539988 - B1_Mus1 SINE Alu 0 148 1 1 997 279 312 0 48 chrX 54110441 54110525 -112539771 - MLT1C LTR MaLR -95 372 293 1 997 306 282 0 0 chrX 54110665 54110736 -112539560 - ID4_ SINE ID -10 73 3 1 997 355 222 12 0 chrX 54110746 54110827 -112539469 - MTEb LTR MaLR -12 367 286 1 997 1230 75 0 0 chrX 54111262 54111409 -112538887 + B1_Mus1 SINE Alu 2 148 0 1 997 489 76 0 0 chrX 54111409 54111475 -112538821 + (GAAA)n Simple_repeat Simple_repeat 3 68 0 2 997 198 0 0 0 chrX 54111753 54111775 -112538521 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 2 997 780 248 6 0 chrX 54112342 54112499 -112537797 - RSINE1 SINE B4 -4 161 4 2 997 441 367 63 32 chrX 54113272 54113556 -112536740 + MER90a LTR ERV1 27 319 -295 2 997 2518 285 98 23 chrX 54113699 54114624 -112535672 - Lx8 LINE L1 -2 7471 6477 2 997 21 0 0 0 chrX 54114869 54114890 -112535406 + AT_rich Low_complexity Low_complexity 1 21 0 2 997 2016 74 25 14 chrX 54114909 54115195 -112535101 - L1_Mus4 LINE L1 -19 6617 6329 2 997 1738 201 31 3 chrX 54115199 54115584 -112534712 - Lx9 LINE L1 -2 7642 7247 2 997 1642 285 26 4 chrX 54115761 54116230 -112534066 - Lx9 LINE L1 -819 6825 6347 2 997 446 290 89 83 chrX 54116290 54116459 -112533837 - B3A SINE B2 -2 196 27 2 997 635 253 32 16 chrX 54116496 54116681 -112533615 + L1MC4 LINE L1 6775 6962 -1080 2 997 928 234 19 0 chrX 54116686 54116869 -112533427 + B3 SINE B2 14 200 -16 2 997 246 62 0 0 chrX 54116869 54116901 -112533395 + (AAATG)n Simple_repeat Simple_repeat 2 33 0 2 997 848 265 40 10 chrX 54116941 54117143 -112533153 - B3 SINE B2 -3 213 6 2 997 2260 245 144 26 chrX 54117164 54118013 -112532283 + L1MC4 LINE L1 7018 7980 -62 2 997 1177 124 27 0 chrX 54118013 54118198 -112532098 - B2_Mm1t SINE B2 -2 191 2 2 997 2260 245 144 26 chrX 54118198 54118263 -112532033 + L1MC4 LINE L1 7981 8040 -2 2 997 1082 115 69 6 chrX 54118271 54118446 -112531850 - B2_Mm1t SINE B2 -5 188 3 2 997 563 359 102 63 chrX 54118460 54118817 -112531479 + L2a LINE L2 2839 3228 -198 2 997 2230 109 12 6 chrX 54118817 54119140 -112531156 + ORR1A2 LTR MaLR 1 325 -2 2 997 563 358 108 69 chrX 54119140 54119246 -112531050 + L2a LINE L2 3229 3314 -112 2 997 4436 48 2 2 chrX 54119246 54119807 -112530489 - L1Md_F2 LINE L1 0 6582 6036 2 997 563 358 108 69 chrX 54119807 54119907 -112530389 + L2a LINE L2 3315 3424 -2 2 997 201 377 28 0 chrX 54119956 54120062 -112530234 - MIR SINE MIR -15 247 139 2 997 1549 37 10 5 chrX 54120263 54120455 -112529841 + B2_Mm1t SINE B2 1 193 0 2 997 287 356 177 8 chrX 54120557 54120817 -112529479 + MamRep137 DNA TcMar? 29 332 -112 2 997 452 365 56 37 chrX 54120938 54121262 -112529034 - L3b LINE CR1 -131 351 22 2 997 414 346 77 68 chrX 54121479 54121832 -112528464 - ORR1E LTR MaLR 0 359 4 2 997 194 367 53 38 chrX 54121838 54121971 -112528325 - L2a LINE L2 -5 3421 3287 2 997 1117 94 100 0 chrX 54122528 54122698 -112527598 + B2_Mm2 SINE B2 1 187 -8 2 997 323 337 9 15 chrX 54122700 54122871 -112527425 + MIRc SINE MIR 19 192 -84 2 997 216 217 0 21 chrX 54123552 54123599 -112526697 + T-rich Low_complexity Low_complexity 5 50 0 2 997 205 191 0 0 chrX 54123754 54123796 -112526500 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 2 997 916 161 0 16 chrX 54123877 54124060 -112526236 + CT-rich Low_complexity Low_complexity 1 180 0 2 997 234 0 0 0 chrX 54124060 54124086 -112526210 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 997 230 258 67 0 chrX 54124207 54124296 -112526000 - L1MC LINE L1 -2028 5854 5760 2 997 526 221 62 41 chrX 54124391 54124537 -112525759 - MIRc SINE MIR -17 251 103 2 997 308 244 22 0 chrX 54125240 54125330 -112524966 + L1MA6 LINE L1 6204 6295 -5 2 997 201 74 0 0 chrX 54125331 54125358 -112524938 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 997 181 231 103 71 chrX 54125434 54125560 -112524736 + L2a LINE L2 3266 3395 -31 2 997 489 312 30 60 chrX 54127579 54127746 -112522550 - MLT1A0 LTR MaLR -42 323 162 2 997 565 152 175 17 chrX 54127796 54127916 -112522380 + B1_Mur4 SINE Alu 2 140 -10 2 997 180 0 0 0 chrX 54127916 54127936 -112522360 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2 997 376 284 0 11 chrX 54128004 54128093 -112522203 - PB1D10 SINE Alu -23 94 7 2 997 426 190 63 63 chrX 54128397 54128588 -112521708 + RMER17C LTR ERVK 83 273 -137 2 997 258 32 0 0 chrX 54128588 54128619 -112521677 + (A)n Simple_repeat Simple_repeat 1 31 0 2 997 267 31 0 0 chrX 54128680 54128712 -112521584 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 997 837 196 202 0 chrX 54129049 54129222 -112521074 + B3 SINE B2 1 208 -8 2 997 1373 65 0 31 chrX 54129275 54129466 -112520830 - B2_Mm2 SINE B2 -9 186 2 2 997 1832 254 68 29 chrX 54129475 54130156 -112520140 - L1MB7 LINE L1 -55 6129 5423 2 997 490 252 34 0 chrX 54130201 54130320 -112519976 - B1F SINE Alu -1 148 26 2 997 475 294 14 127 chrX 54130320 54130453 -112519843 - ID_B1 SINE B4 -1 223 5 2 997 411 21 0 0 chrX 54130981 54131029 -112519267 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 997 183 93 22 44 chrX 54131038 54131083 -112519213 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 2 997 336 24 0 0 chrX 54131085 54131126 -112519170 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 997 466 352 136 42 chrX 54131151 54131786 -112518510 + L2a LINE L2 2694 3393 -33 2 997 241 320 85 76 chrX 54132170 54132393 -112517903 + LTR41B LTR ERVL 450 674 -84 2 124 1698 291 33 7 chrX 54132516 54132966 -112517330 + MLT1C LTR MaLR 4 465 -2 2 998 1158 44 0 0 chrX 54133196 54133332 -112516964 + B1_Mus1 SINE Alu 1 136 -12 2 998 183 42 0 0 chrX 54133332 54133356 -112516940 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 2 998 486 146 0 0 chrX 54133369 54133451 -112516845 + (GAAA)n Simple_repeat Simple_repeat 4 85 0 2 998 328 327 157 9 chrX 54133451 54133667 -112516629 + LTR83 LTR ERVL 532 779 -1 2 998 247 314 28 7 chrX 54133862 54134003 -112516293 + L1MB5 LINE L1 4964 5107 -1039 2 998 33707 35 1 0 chrX 54134000 54139839 -112510457 + L1Md_T LINE L1 1 5589 -297 2 998 8985 8 0 0 chrX 54139839 54140835 -112509461 + L1Md_T LINE L1 5590 6585 0 2 998 829 252 87 49 chrX 54140840 54141303 -112508993 + L1MB5 LINE L1 5094 5574 -610 2 998 509 250 0 18 chrX 54141481 54141591 -112508705 + PB1D10 SINE Alu 10 117 0 2 998 286 269 209 0 chrX 54141750 54141884 -112508412 + L1MB5 LINE L1 5755 5916 -258 2 998 1129 263 91 12 chrX 54141892 54142234 -112508062 - MTE2a LTR MaLR -5 374 6 2 998 512 265 85 5 chrX 54142240 54142441 -112507855 + L1MB5 LINE L1 5926 6142 -32 2 998 753 271 29 19 chrX 54142734 54142941 -112507355 + B3 SINE B2 2 210 -6 2 998 1373 68 11 0 chrX 54143517 54143694 -112506602 + B2_Mm1t SINE B2 1 179 -14 2 998 419 93 0 5 chrX 54143723 54143787 -112506509 + B2_Mm2 SINE B2 48 109 -107 2 998 180 0 0 0 chrX 54143803 54143823 -112506473 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2 998 233 242 0 61 chrX 54143858 54143924 -112506372 - MIR SINE MIR -10 252 191 2 998 455 48 16 0 chrX 54144044 54144106 -112506190 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 2 998 726 216 22 0 chrX 54144292 54144426 -112505870 - B1_Mur1 SINE Alu -5 144 8 2 998 589 248 75 33 chrX 54144617 54144830 -112505466 + Lx8 LINE L1 6898 7119 -354 2 998 462 292 21 50 chrX 54145004 54145244 -112505052 - L1M5 LINE L1 -542 5698 5459 2 998 265 313 0 97 chrX 54145244 54145368 -112504928 + PB1D10 SINE Alu 1 112 -5 2 998 367 207 136 11 chrX 54145579 54145667 -112504629 - BC1_Mm scRNA scRNA -53 99 1 2 998 852 291 100 42 chrX 54146077 54146529 -112503767 + Lx8 LINE L1 6966 7443 -30 2 998 468 51 0 0 chrX 54148425 54148484 -112501812 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 998 231 307 49 27 chrX 54148507 54148691 -112501605 - L1MC4 LINE L1 -142 7900 7713 2 998 1234 268 105 42 chrX 54148734 54149487 -112500809 - L1MC4 LINE L1 -445 7597 6798 2 998 187 31 0 59 chrX 54149488 54149522 -112500774 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 998 384 77 0 0 chrX 54149574 54149626 -112500670 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 998 270 0 0 0 chrX 54149626 54149656 -112500640 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 998 1272 14 0 0 chrX 54150407 54150553 -112499743 + B1_Mus2 SINE Alu 2 147 0 2 998 1261 140 13 35 chrX 54150963 54151193 -112499103 - URR1B DNA MER1_type 0 225 1 2 998 22 35 0 0 chrX 54151541 54151570 -112498726 + AT_rich Low_complexity Low_complexity 1 29 0 2 998 312 332 133 32 chrX 54151960 54152178 -112498118 - L1MC4 LINE L1 -1978 5904 5665 2 998 979 209 19 19 chrX 54154034 54154249 -112496047 - B3 SINE B2 -1 215 1 2 998 927 239 0 5 chrX 54154621 54154823 -112495473 + B3 SINE B2 1 201 -15 2 998 279 0 0 0 chrX 54154824 54154855 -112495441 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 998 591 270 122 10 chrX 54155036 54155332 -112494964 - L1MDb LINE L1 -611 6008 5680 2 998 380 117 345 26 chrX 54155332 54155445 -112494851 - B2_Mm2 SINE B2 0 195 47 2 998 1262 102 23 0 chrX 54155473 54155649 -112494647 - B2_Mm2 SINE B2 -14 181 2 2 998 340 183 119 173 chrX 54155649 54155834 -112494462 - L1MDb LINE L1 -2356 5689 5515 2 998 240 350 0 16 chrX 54156010 54156132 -112494164 - L1MDb LINE L1 -957 5449 5330 2 998 339 211 156 0 chrX 54156160 54156250 -112494046 - L1MDb LINE L1 -2031 4375 4272 2 998 324 0 0 0 chrX 54156250 54156286 -112494010 + (T)n Simple_repeat Simple_repeat 1 36 0 2 998 339 25 0 0 chrX 54156386 54156426 -112493870 + (T)n Simple_repeat Simple_repeat 1 40 0 2 998 4558 18 2 0 chrX 54156430 54156983 -112493313 + L1_Mm LINE L1 4813 5366 -517 2 998 857 222 44 39 chrX 54157008 54157214 -112493082 - B3 SINE B2 -9 207 1 2 998 709 280 33 7 chrX 54157233 54157506 -112492790 - L1MDb LINE L1 -2139 4267 3988 2 998 871 266 118 90 chrX 54157767 54158020 -112492276 - L1MDb LINE L1 -5340 1069 778 2 998 242 39 18 55 chrX 54158020 54158075 -112492221 + (TTA)n Simple_repeat Simple_repeat 2 54 0 2 998 871 266 118 90 chrX 54158075 54158378 -112491918 - L1MDb LINE L1 -5632 777 497 2 998 365 339 148 6 chrX 54158489 54158658 -112491638 - L1MDb LINE L1 -5967 442 250 2 998 191 62 62 0 chrX 54158720 54158752 -112491544 + (GAAAA)n Simple_repeat Simple_repeat 3 36 0 2 998 1072 139 14 93 chrX 54158836 54159050 -112491246 - URR1A DNA MER1_type -2 224 28 2 998 234 0 0 0 chrX 54159166 54159192 -112491104 + (TC)n Simple_repeat Simple_repeat 2 27 0 2 998 225 0 0 0 chrX 54159192 54159216 -112491080 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 998 227 263 0 17 chrX 54160123 54160181 -112490115 + CT-rich Low_complexity Low_complexity 2 58 0 2 998 1390 287 55 9 chrX 54160234 54160782 -112489514 - L1MA4 LINE L1 -361 5939 5367 2 998 330 276 86 34 chrX 54160777 54161068 -112489228 + L1_Mur1 LINE L1 5032 5334 -809 2 998 603 233 23 0 chrX 54161288 54161417 -112488879 - B1_Mur4 SINE Alu 0 150 19 2 998 337 351 68 21 chrX 54162855 54163047 -112487249 - L2b LINE L2 -221 3154 2954 2 998 267 189 0 0 chrX 54163162 54163215 -112487081 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 998 1618 125 62 13 chrX 54163312 54163619 -112486677 + Lx9 LINE L1 7323 7644 0 3 998 261 354 99 24 chrX 54163716 54163968 -112486328 - L2b LINE L2 -799 2620 2350 2 998 289 325 171 24 chrX 54165024 54165147 -112485149 + B1F SINE Alu 3 143 -6 3 998 226 333 128 64 chrX 54165566 54165675 -112484621 + PB1D10 SINE Alu 1 116 -1 3 998 305 398 67 9 chrX 54165702 54165925 -112484371 - MIRb SINE MIR -6 262 27 3 998 256 325 77 26 chrX 54170116 54170271 -112480025 - LTR82B Low_complexity ERVL -528 302 140 3 998 189 240 60 0 chrX 54172245 54172295 -112478001 + L3b LINE CR1 174 226 -256 3 998 749 237 5 93 chrX 54172545 54172759 -112477537 + B3 SINE B2 3 197 -19 3 998 444 82 0 0 chrX 54172764 54172825 -112477471 + (TAAA)n Simple_repeat Simple_repeat 3 63 0 3 998 207 0 0 0 chrX 54172869 54172892 -112477404 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 998 1004 249 24 19 chrX 54173077 54173286 -112477010 - B3 SINE B2 -1 215 6 3 998 423 0 0 0 chrX 54173293 54173340 -112476956 + (CTTG)n Simple_repeat Simple_repeat 2 48 0 3 998 520 296 127 0 chrX 54173355 54173497 -112476799 - RSINE1 SINE B4 -1 164 5 3 998 3093 77 5 12 chrX 54173511 54173934 -112476362 - L1_Mus3 LINE L1 0 6638 6219 3 998 719 234 0 0 chrX 54174414 54174542 -112475754 - B1_Mur4 SINE Alu -21 129 2 3 998 504 0 0 0 chrX 54175480 54175536 -112474760 + (TC)n Simple_repeat Simple_repeat 1 56 0 3 998 302 324 83 56 chrX 54175901 54176081 -112474215 - MLT1B LTR MaLR -83 307 123 3 998 429 290 30 80 chrX 54176917 54177116 -112473180 - MLT1A0 LTR MaLR -165 200 12 3 998 789 61 0 0 chrX 54177338 54177437 -112472859 - B1_Mus1 SINE Alu -45 103 5 3 998 1118 106 0 18 chrX 54177442 54177605 -112472691 - B2_Mm2 SINE B2 -32 163 4 3 998 786 176 0 0 chrX 54177770 54177918 -112472378 + CT-rich Low_complexity Low_complexity 1 148 0 3 998 711 216 0 14 chrX 54177918 54178059 -112472237 - B1_Mur2 SINE Alu -6 143 5 3 998 284 275 26 8 chrX 54179101 54179197 -112471099 + MIRc SINE MIR 60 154 -54 3 998 189 0 0 0 chrX 54179544 54179565 -112470731 + (T)n Simple_repeat Simple_repeat 1 21 0 3 998 1231 146 82 5 chrX 54180035 54180242 -112470054 + URR1A DNA MER1_type 1 223 -3 3 998 502 221 38 9 chrX 54180723 54180828 -112469468 + MIR SINE MIR 110 217 -45 3 998 21 0 0 0 chrX 54181524 54181545 -112468751 + AT_rich Low_complexity Low_complexity 1 21 0 3 998 222 37 0 0 chrX 54181593 54181620 -112468676 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 998 535 279 0 49 chrX 54181620 54181763 -112468533 - B1F SINE Alu -13 136 1 3 998 180 143 0 0 chrX 54183554 54183596 -112466700 + (T)n Simple_repeat Simple_repeat 1 42 0 3 998 477 308 61 15 chrX 54184430 54184562 -112465734 + B1F SINE Alu 1 138 -11 3 998 228 67 0 0 chrX 54184562 54184592 -112465704 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 3 998 606 126 0 0 chrX 54184654 54184757 -112465539 + (GAAA)n Simple_repeat Simple_repeat 2 104 0 3 998 411 287 59 0 chrX 54185284 54185385 -112464911 - PB1D7 SINE Alu -8 112 6 3 998 1096 50 65 0 chrX 54185834 54185973 -112464323 - B1_Mus1 SINE Alu 0 148 1 3 998 522 248 0 49 chrX 54185987 54186110 -112464186 + PB1D10 SINE Alu 1 117 0 3 998 318 26 0 0 chrX 54186112 54186151 -112464145 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 998 712 294 144 11 chrX 54186644 54187109 -112463187 - L1MB7 LINE L1 -147 6037 5511 3 998 400 271 42 5 chrX 54187303 54187433 -112462863 - PB1D10 SINE Alu -6 143 2 3 998 1815 209 72 3 chrX 54187623 54188012 -112462284 - MTD LTR MaLR -3 416 1 3 998 1280 159 48 16 chrX 54188058 54188337 -112461959 - MTC LTR MaLR -6 415 1 3 998 944 266 7 7 chrX 54188365 54188649 -112461647 - L1MC1 LINE L1 -306 6027 5744 3 998 415 235 14 22 chrX 54188645 54188784 -112461512 - L1MC1 LINE L1 -834 5510 5373 3 998 629 269 94 67 chrX 54188798 54189021 -112461275 + MLT1A0 LTR MaLR 3 231 -134 3 998 374 123 0 47 chrX 54190369 54190454 -112459842 - Lx6 LINE L1 -26 7434 7354 3 998 662 190 32 46 chrX 54190462 54190516 -112459780 + ID_B1 SINE B4 22 217 -75 3 998 1090 30 0 0 chrX 54190516 54190647 -112459649 + B1_Mus1 SINE Alu 9 139 -9 3 998 252 0 0 0 chrX 54190647 54190675 -112459621 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 3 998 419 214 0 0 chrX 54190676 54190760 -112459536 - Lx6 LINE L1 -192 7268 7185 3 998 485 292 164 68 chrX 54190859 54191256 -112459040 - MER63B DNA AcHobo -1 435 1 3 998 343 307 112 13 chrX 54191346 54191498 -112458798 + MLT1A0 LTR MaLR 332 498 -50 3 998 426 39 0 0 chrX 54192031 54192083 -112458213 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 998 263 28 28 0 chrX 54192093 54192129 -112458167 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 998 303 93 0 0 chrX 54192129 54192172 -112458124 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 998 270 0 0 0 chrX 54192172 54192202 -112458094 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 998 683 207 0 0 chrX 54192202 54192313 -112457983 - RSINE1 SINE B4 -51 114 4 3 998 723 87 0 0 chrX 54192705 54192809 -112457487 + (GGA)n Simple_repeat Simple_repeat 3 106 0 3 998 597 28 0 0 chrX 54192892 54192963 -112457333 + (TC)n Simple_repeat Simple_repeat 2 72 0 3 998 347 324 133 38 chrX 54193038 54193301 -112456995 + L1MC5 LINE L1 7614 7901 -60 3 998 899 148 196 5 chrX 54194571 54194755 -112455541 - URR1A DNA MER1_type -7 219 1 3 998 334 309 93 22 chrX 54194836 54195018 -112455278 + L2 LINE L2 2727 2921 -498 3 998 207 0 0 0 chrX 54195091 54195114 -112455182 + (T)n Simple_repeat Simple_repeat 1 23 0 3 998 252 300 85 57 chrX 54195795 54195901 -112454395 - MIRb SINE MIR -132 130 22 3 998 276 181 4 12 chrX 54195910 54195992 -112454304 + L1MA5 LINE L1 6159 6239 -58 3 998 506 259 55 36 chrX 54196104 54196324 -112453972 - L1ME2z LINE L1 -292 6152 5929 3 998 1855 74 61 0 chrX 54196334 54196631 -112453665 + MusHAL1 LINE L1 1766 2080 -632 3 998 353 348 37 4 chrX 54196828 54197073 -112453223 - L1ME2z LINE L1 -366 5813 5561 3 998 295 316 90 54 chrX 54197173 54197534 -112452762 - L1ME2z LINE L1 -927 5219 4853 3 998 300 53 65 26 chrX 54197535 54197612 -112452684 + (CAAAAA)n Simple_repeat Simple_repeat 2 81 0 3 998 384 325 19 0 chrX 54197630 54197784 -112452512 + Lx9 LINE L1 7274 7430 -214 3 998 977 76 15 0 chrX 54197969 54198100 -112452196 + B2_Mm2 SINE B2 49 181 -14 3 998 391 263 31 71 chrX 54198236 54198363 -112451933 - B4A SINE B4 0 292 171 3 998 28 61 0 15 chrX 54198524 54198576 -112451720 + AT_rich Low_complexity Low_complexity 1 52 0 3 998 1218 41 0 0 chrX 54198576 54198723 -112451573 - B1_Mm SINE Alu 0 147 1 3 998 28 61 0 15 chrX 54198723 54198737 -112451559 + AT_rich Low_complexity Low_complexity 1 14 0 3 998 701 262 135 11 chrX 54198885 54199232 -112451064 - L1MA4 LINE L1 -395 5905 5516 3 998 1904 132 0 17 chrX 54199245 54199539 -112450757 - MTC LTR MaLR -8 413 125 3 998 786 152 16 0 chrX 54199539 54199664 -112450632 + B1_Mus1 SINE Alu 7 133 -15 3 998 646 148 19 0 chrX 54199659 54199767 -112450529 + B1_Mus2 SINE Alu 38 147 0 3 998 339 234 0 0 chrX 54199802 54199866 -112450430 - MTC LTR MaLR -301 120 57 3 998 847 183 0 27 chrX 54199923 54200069 -112450227 - B1_Mur2 SINE Alu -1 148 7 3 998 374 293 181 43 chrX 54200219 54200640 -112449656 - L1ME2z LINE L1 -4797 1445 967 3 998 337 336 155 11 chrX 54200956 54201233 -112449063 - L1ME2z LINE L1 -5473 663 347 3 998 369 0 0 0 chrX 54201706 54201747 -112448549 + (TC)n Simple_repeat Simple_repeat 1 41 0 3 998 441 0 0 0 chrX 54201747 54201795 -112448501 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 998 441 0 0 0 chrX 54202448 54202497 -112447799 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 998 193 316 70 21 chrX 54203150 54203279 -112447017 + MIR SINE MIR 4 143 -125 3 998 440 258 128 8 chrX 54203500 54203633 -112446663 - B1_Mur1 SINE Alu 0 149 1 3 998 322 308 11 11 chrX 54203676 54203768 -112446528 - MIRb SINE MIR -133 135 44 3 998 189 0 0 0 chrX 54203816 54203837 -112446459 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 998 492 339 92 29 chrX 54203937 54204177 -112446119 - B4A SINE B4 -5 287 33 3 998 196 394 89 13 chrX 54204423 54204580 -112445716 + L2c LINE L2 3028 3196 -191 3 998 307 317 0 10 chrX 54204907 54205009 -112445287 - MIR3 SINE MIR -25 183 83 3 998 311 371 27 38 chrX 54205033 54205218 -112445078 - L2b LINE L2 0 3375 3193 3 998 1075 293 40 28 chrX 54206074 54206427 -112443869 - MTE2b LTR MaLR -61 358 2 3 998 237 65 0 0 chrX 54207336 54207367 -112442929 + (TGGA)n Simple_repeat Simple_repeat 3 33 0 3 998 46 19 0 0 chrX 54208248 54208301 -112441995 + AT_rich Low_complexity Low_complexity 1 53 0 3 998 364 274 18 37 chrX 54208327 54208463 -112441833 - Lx4B LINE L1 -4 7054 6922 3 998 216 0 0 0 chrX 54208463 54208487 -112441809 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 998 364 274 18 37 chrX 54208487 54208513 -112441783 - Lx4B LINE L1 -137 6921 6896 3 998 373 149 39 39 chrX 54208918 54208995 -112441301 - HAL1-3A_ME LINE L1 -805 2053 1977 3 998 362 298 32 0 chrX 54210777 54210871 -112439425 - B1F SINE Alu -52 97 1 3 998 27 0 0 0 chrX 54210891 54210918 -112439378 + AT_rich Low_complexity Low_complexity 1 27 0 3 998 579 324 33 11 chrX 54211119 54211300 -112438996 - MER20 DNA MER1_type 0 219 35 3 998 274 289 37 37 chrX 54211349 54211457 -112438839 - Charlie4z DNA MER1_type -6 161 54 3 998 320 269 197 43 chrX 54212273 54212397 -112437899 + L1M5 LINE L1 5106 5232 -914 3 998 315 0 0 0 chrX 54212397 54212432 -112437864 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 998 320 269 197 43 chrX 54212432 54212540 -112437756 + L1M5 LINE L1 5233 5374 -772 3 998 247 203 0 17 chrX 54212578 54212638 -112437658 + L1M5 LINE L1 5380 5438 -726 3 998 186 43 0 0 chrX 54213070 54213093 -112437203 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 998 412 291 139 110 chrX 54213482 54213783 -112436513 - MLT1A1 LTR MaLR -42 332 23 3 998 189 180 140 0 chrX 54214304 54214354 -112435942 - MIRm SINE MIR -12 264 208 4 998 189 404 18 9 chrX 54214420 54214530 -112435766 - MIR SINE MIR -26 236 126 4 998 270 81 0 0 chrX 54214531 54214568 -112435728 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 998 778 348 52 23 chrX 54214972 54215316 -112434980 - LTR75 LTR ERVL 0 562 209 4 998 230 200 0 0 chrX 54215650 54215695 -112434601 + ID_B1 SINE B4 145 189 -35 4 998 212 296 27 40 chrX 54215695 54215714 -112434582 + B1F SINE Alu 82 132 -17 4 998 288 77 0 0 chrX 54216691 54216730 -112433566 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 998 234 333 146 13 chrX 54217005 54217163 -112433133 + MIRb SINE MIR 87 265 -3 4 998 482 103 13 0 chrX 54217299 54217377 -112432919 + (TC)n Simple_repeat Simple_repeat 2 80 0 4 998 6378 40 2 0 chrX 54217508 54218315 -112431981 - L1Md_F2 LINE L1 -92 5791 4984 4 998 6509 34 8 0 chrX 54218315 54219081 -112431215 + L1Md_F2 LINE L1 5799 6570 -12 4 998 436 269 67 30 chrX 54219668 54219686 -112430610 - ID_B1 SINE B4 -2 222 84 4 998 564 200 103 9 chrX 54219686 54219802 -112430494 - B1F SINE Alu -20 129 3 4 998 725 229 135 40 chrX 54219815 54220119 -112430177 - L1MA6 LINE L1 -26 6274 5942 4 998 1041 214 19 5 chrX 54220141 54220348 -112429948 - B3 SINE B2 -6 210 1 4 998 366 42 0 0 chrX 54220458 54220506 -112429790 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 998 229 346 19 19 chrX 54221094 54221200 -112429096 + MIR SINE MIR 30 135 -73 4 998 458 162 44 7 chrX 54222176 54222313 -112427983 + (TG)n Simple_repeat Simple_repeat 1 142 0 4 998 357 102 0 0 chrX 54222312 54222371 -112427925 + (GA)n Simple_repeat Simple_repeat 1 59 0 4 998 571 326 99 19 chrX 54222372 54222635 -112427661 - B4A SINE B4 -6 286 3 4 998 450 0 0 0 chrX 54223245 54223295 -112427001 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 998 298 337 128 30 chrX 54224287 54224584 -112425712 - L3 LINE CR1 -237 4252 3927 4 998 246 336 8 110 chrX 54224600 54224727 -112425569 + PB1D10 SINE Alu 2 115 -2 4 998 222 118 0 0 chrX 54224729 54224763 -112425533 + (A)n Simple_repeat Simple_repeat 1 34 0 4 998 287 296 0 14 chrX 54224765 54224837 -112425459 + ID4_ SINE ID 2 72 -11 4 998 345 82 0 0 chrX 54224844 54224893 -112425403 + (TAG)n Simple_repeat Simple_repeat 2 50 0 4 998 702 320 77 33 chrX 54225668 54226023 -112424273 - MLT1F1 LTR MaLR 0 569 145 4 998 1209 70 0 0 chrX 54226023 54226166 -112424130 - B1_Mm SINE Alu -3 144 2 4 998 650 353 157 49 chrX 54226166 54226302 -112423994 - MLT1F1 LTR MaLR -404 144 4 4 998 6694 133 65 4 chrX 54227090 54228272 -112422024 + MYSERV16_I-int LTR ERVK 1073 2326 0 4 998 4187 89 91 0 chrX 54228314 54228884 -112421412 - L1_Mus3 LINE L1 -10 6628 6007 4 998 495 0 0 0 chrX 54229035 54229090 -112421206 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 998 215 273 0 0 chrX 54229110 54229154 -112421142 + C-rich Low_complexity Low_complexity 1 44 0 4 998 1939 237 165 7 chrX 54229155 54229712 -112420584 - Lx6 LINE L1 -26 7434 6790 4 998 2121 153 251 2 chrX 54229710 54230168 -112420128 + L1_Mur2 LINE L1 4008 4579 -1298 4 998 198 0 0 0 chrX 54230568 54230590 -112419706 + (T)n Simple_repeat Simple_repeat 1 22 0 4 998 1175 43 43 0 chrX 54230590 54230731 -112419565 - B1_Mus2 SINE Alu 0 147 1 4 998 247 169 34 0 chrX 54231014 54231073 -112419223 + (TATAA)n Simple_repeat Simple_repeat 5 65 0 4 998 377 341 46 23 chrX 54231277 54231451 -112418845 - MIR3 SINE MIR -10 198 21 4 998 331 98 0 0 chrX 54232165 54232216 -112418080 - L1_Mus3 LINE L1 -9 6629 6579 4 998 4919 123 89 79 chrX 54232252 54233197 -112417099 - L1_Mus1 LINE L1 -1 6566 5613 4 998 646 233 26 79 chrX 54233639 54233867 -112416429 - B3 SINE B2 0 216 1 4 998 372 43 0 0 chrX 54233996 54234042 -112416254 + (CAAG)n Simple_repeat Simple_repeat 2 47 0 4 998 908 158 15 0 chrX 54234801 54234934 -112415362 + B1_Mus1 SINE Alu 1 135 -13 4 998 261 0 0 0 chrX 54234935 54234964 -112415332 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 998 229 100 0 104 chrX 54234965 54235032 -112415264 + A-rich Low_complexity Low_complexity 4 63 0 4 998 284 282 0 0 chrX 54236833 54236904 -112413392 + MER67D LTR ERV1 15 85 -429 4 998 288 296 14 0 chrX 54236995 54237066 -112413230 - ID4_ SINE ID -10 73 2 4 998 344 279 87 69 chrX 54237102 54237275 -112413021 - B4A SINE B4 0 292 117 4 998 340 328 55 23 chrX 54237347 54237372 -112412924 + MER67D LTR ERV1 173 199 -512 4 998 521 243 27 36 chrX 54237372 54237483 -112412813 - PB1D7 SINE Alu -8 112 3 4 998 576 343 77 18 chrX 54237483 54237743 -112412553 + MER67D LTR ERV1 168 445 -69 4 998 7662 25 0 0 chrX 54237746 54238616 -112411680 - L1Md_F2 LINE L1 -12 6570 5701 4 998 194 244 73 62 chrX 54238961 54239057 -112411239 - L2c LINE L2 -155 3232 3136 4 998 287 330 10 0 chrX 54239575 54239672 -112410624 + PB1D7 SINE Alu 5 102 -18 4 998 222 214 0 0 chrX 54239696 54239738 -112410558 + GA-rich Low_complexity Low_complexity 2 43 0 4 998 5744 54 0 5 chrX 54239827 54240497 -112409799 - L1Md_F2 LINE L1 -12 6570 5904 4 998 418 252 21 64 chrX 54240753 54240893 -112409403 + B1F SINE Alu 1 134 -15 4 998 189 0 0 0 chrX 54240954 54240975 -112409321 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 998 1187 77 0 6 chrX 54241027 54241184 -112409112 + L1_Mus2 LINE L1 6411 6566 0 4 998 191 250 0 19 chrX 54242316 54242369 -112407927 - L2a LINE L2 0 3426 3375 4 998 556 269 164 21 chrX 54242505 54242889 -112407407 + L1ME2 LINE L1 5556 5994 -170 4 998 214 284 14 0 chrX 54243277 54243351 -112406945 + (TA)n Simple_repeat Simple_repeat 2 76 0 4 998 759 112 16 214 chrX 54244148 54244330 -112405966 + B1_Mm SINE Alu 2 147 0 4 998 594 214 0 17 chrX 54244911 54245030 -112405266 + B1F SINE Alu 23 139 -10 4 998 477 0 0 0 chrX 54245030 54245083 -112405213 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 998 186 43 0 0 chrX 54245145 54245168 -112405128 + (CATG)n Simple_repeat Simple_repeat 1 23 0 4 998 1028 264 90 31 chrX 54245398 54245852 -112404444 + L1ME5 LINE L1 5700 6180 -14 4 998 276 279 148 25 chrX 54246020 54246182 -112404114 - L1MA9 LINE L1 0 6312 6131 4 998 547 222 86 171 chrX 54246183 54246335 -112403961 - B3A SINE B2 -8 187 49 4 998 708 218 8 0 chrX 54246352 54246485 -112403811 - B1_Mur2 SINE Alu -6 143 10 4 998 883 291 43 40 chrX 54246491 54246867 -112403429 - L1MA9 LINE L1 -167 6145 5769 4 998 374 253 53 0 chrX 54246953 54247048 -112403248 - Lx8 LINE L1 -353 7120 7021 4 998 424 255 115 46 chrX 54247044 54247262 -112403034 - L1M3 LINE L1 -389 5800 5568 4 998 201 271 99 14 chrX 54247310 54247381 -112402915 - MIR SINE MIR -102 106 30 4 998 858 258 108 33 chrX 54248119 54248424 -112401872 - L1MA10 LINE L1 -10 6324 5997 4 998 1111 162 22 75 chrX 54248750 54248848 -112401448 + MTC LTR MaLR 1 98 -323 4 998 2322 72 142 9 chrX 54248848 54249186 -112401110 + L1_Mus3 LINE L1 6250 6632 -6 4 998 1111 162 22 75 chrX 54249186 54249208 -112401088 + MTC LTR MaLR 99 118 -303 4 998 3440 37 0 0 chrX 54249208 54249591 -112400705 - L1Md_T LINE L1 -1 6581 6199 4 998 1111 162 22 75 chrX 54249591 54249696 -112400600 + MTC LTR MaLR 119 215 -206 4 998 2610 283 49 61 chrX 54249697 54250585 -112399711 + Lx5 LINE L1 6136 7032 -18 4 998 435 19 0 0 chrX 54250639 54250691 -112399605 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 998 357 24 0 0 chrX 54250691 54250732 -112399564 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 998 226 26 51 26 chrX 54251355 54251394 -112398902 + (TTTTTG)n Simple_repeat Simple_repeat 5 44 0 4 998 1315 27 7 0 chrX 54251395 54251541 -112398755 - B1_Mus2 SINE Alu 0 147 1 4 998 361 252 253 109 chrX 54251782 54251956 -112398340 + RMER30 DNA MER1_type 2 200 -2 4 998 2595 50 3 30 chrX 54252383 54252715 -112397581 - L1Md_F2 LINE L1 -4 6578 6256 4 998 243 0 0 0 chrX 54253169 54253196 -112397100 + (TTCA)n Simple_repeat Simple_repeat 4 30 0 4 998 335 283 34 34 chrX 54253815 54253932 -112396364 - MER5A1 DNA MER1_type -29 137 21 4 998 217 301 84 49 chrX 54254490 54254633 -112395663 + MIRc SINE MIR 116 263 -5 4 998 604 275 0 8 chrX 54255534 54255666 -112394630 + ID_B1 SINE B4 87 217 -7 4 998 266 212 0 10 chrX 54255673 54255773 -112394523 + (CA)n Simple_repeat Simple_repeat 2 100 0 4 998 284 301 9 28 chrX 54256008 54256114 -112394182 + CT-rich Low_complexity Low_complexity 5 108 0 4 998 353 22 0 21 chrX 54257042 54257089 -112393207 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 998 459 0 0 0 chrX 54257623 54257674 -112392622 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 998 234 0 0 0 chrX 54257674 54257699 -112392597 + (GA)n Simple_repeat Simple_repeat 2 27 0 4 998 310 372 62 23 chrX 54257827 54258003 -112392293 + MIR SINE MIR 47 229 -39 4 998 270 355 24 24 chrX 54258990 54259117 -112391179 - L2 LINE L2 -1232 2187 2061 4 998 239 341 57 0 chrX 54260245 54260365 -112389931 + MIRc SINE MIR 31 162 -106 4 998 349 316 44 0 chrX 54260423 54260559 -112389737 + L2a LINE L2 3284 3425 -1 4 998 833 58 8 0 chrX 54260756 54260876 -112389420 + (TG)n Simple_repeat Simple_repeat 1 121 0 4 998 703 270 0 7 chrX 54261143 54261292 -112389004 - RSINE1 SINE B4 -15 150 3 4 998 243 353 50 8 chrX 54261317 54261437 -112388859 + MIR SINE MIR 74 198 -64 4 998 7588 111 23 20 chrX 54261500 54262646 -112387650 - Lx3B LINE L1 -4 6969 5821 4 998 315 0 0 0 chrX 54263084 54263119 -112387177 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 4 998 386 320 110 26 chrX 54263129 54263283 -112387013 - MER58A DNA MER1_type -16 208 42 4 998 1241 56 7 0 chrX 54263374 54263518 -112386778 + B1_Mus2 SINE Alu 1 145 -2 5 124 526 252 39 8 chrX 54263780 54263908 -112386388 - RSINE1 SINE B4 -32 133 2 5 999 3989 7 0 0 chrX 54263936 54264377 -112385919 + L1Md_A LINE L1 5146 5586 -297 5 999 9366 14 1 0 chrX 54264377 54265371 -112384925 + L1Md_A LINE L1 5587 6581 -1 5 999 26 0 0 0 chrX 54265371 54265397 -112384899 + AT_rich Low_complexity Low_complexity 1 26 0 5 999 1221 272 48 13 chrX 54265431 54265807 -112384489 - Lx6 LINE L1 -27 7433 7045 5 999 249 159 47 16 chrX 54270127 54270191 -112380105 - Lx9 LINE L1 -2 7642 7577 5 999 405 318 152 24 chrX 54270616 54271035 -112379261 - L1M5 LINE L1 -2339 5543 5071 5 999 580 249 147 26 chrX 54271553 54271743 -112378553 - Cheshire DNA MER1_type -2204 216 4 5 999 233 263 117 95 chrX 54272176 54272307 -112377989 - MIRc SINE MIR -9 259 116 5 999 362 320 98 49 chrX 54272501 54272721 -112377575 + MIRb SINE MIR 9 262 0 5 999 437 281 107 55 chrX 54272801 54273091 -112377205 - L1MD2 LINE L1 -17 6733 6429 5 999 1168 298 113 28 chrX 54273170 54273731 -112376565 - L1MD2 LINE L1 -435 6315 5715 5 999 3520 39 0 12 chrX 54273731 54274143 -112376153 - L1Md_F2 LINE L1 -5 6577 6171 5 999 1168 301 102 22 chrX 54274143 54274222 -112376074 - L1MD2 LINE L1 -823 5714 5623 5 999 399 307 39 40 chrX 54274266 54274444 -112375852 + MLT1B LTR MaLR 70 255 -212 5 999 288 262 104 21 chrX 54274670 54274814 -112375482 - L1MD2 LINE L1 -923 5614 5459 5 999 719 288 113 20 chrX 54274836 54275244 -112375052 - L1MD2 LINE L1 -1265 5272 4827 5 999 27 29 0 0 chrX 54275253 54275287 -112375009 + AT_rich Low_complexity Low_complexity 1 34 0 5 999 5773 104 44 27 chrX 54275287 54276146 -112374150 - Lx4A LINE L1 0 7058 6185 5 999 342 0 0 0 chrX 54276169 54276207 -112374089 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 5 999 24 85 0 0 chrX 54276335 54276394 -112373902 + AT_rich Low_complexity Low_complexity 1 59 0 5 999 956 296 62 36 chrX 54276507 54276980 -112373316 - L1MD2 LINE L1 -1951 4586 4069 5 999 500 260 116 16 chrX 54277016 54277145 -112373151 - B1F SINE Alu -4 145 4 5 999 987 302 28 59 chrX 54277152 54277527 -112372769 - L1MA6 LINE L1 -1 6299 5938 5 999 1500 275 10 29 chrX 54277527 54277913 -112372383 + MTE2b LTR MaLR 1 379 0 5 999 987 302 28 59 chrX 54277913 54278082 -112372214 - L1MA6 LINE L1 -363 5937 5772 5 999 598 186 53 9 chrX 54278096 54278210 -112372086 + B4A SINE B4 172 290 -2 5 999 1705 232 103 21 chrX 54278229 54278493 -112371803 + L1M2 LINE L1 4361 4655 -1488 5 999 504 0 0 0 chrX 54278493 54278549 -112371747 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 999 1705 232 103 21 chrX 54278549 54278866 -112371430 + L1M2 LINE L1 4656 4989 -1154 5 999 757 267 82 0 chrX 54279003 54279273 -112371023 - L1MD2 LINE L1 -2635 3902 3611 5 999 821 295 100 46 chrX 54279305 54279553 -112370743 - L1MD2 LINE L1 -4787 1846 1584 5 999 419 303 9 0 chrX 54279553 54279662 -112370634 - PB1D10 SINE Alu -7 110 1 5 999 821 295 100 46 chrX 54279662 54280131 -112370165 - L1MD2 LINE L1 -5050 1583 1090 5 999 291 54 0 0 chrX 54280412 54280449 -112369847 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 999 477 0 0 0 chrX 54280449 54280501 -112369795 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 999 1194 218 0 0 chrX 54280681 54280892 -112369404 - B3 SINE B2 -1 215 5 5 999 1199 232 43 27 chrX 54281198 54281526 -112368770 + MER46C DNA MER2_type 2 334 -4 5 999 310 321 50 72 chrX 54282520 54282701 -112367595 + MER5B DNA MER1_type 1 177 -1 5 999 262 321 111 28 chrX 54283044 54283188 -112367108 - MIRb SINE MIR -76 192 37 5 999 245 319 61 111 chrX 54283198 54283378 -112366918 + MLT1B LTR MaLR 1 171 -219 5 999 882 159 14 14 chrX 54283385 54283525 -112366771 + B1_Mus1 SINE Alu 3 142 -6 5 999 360 0 0 0 chrX 54284214 54284254 -112366042 + (GTTTG)n Simple_repeat Simple_repeat 4 43 0 5 999 312 294 0 132 chrX 54284824 54284930 -112365366 + B4 SINE B4 72 163 -129 5 999 504 237 0 51 chrX 54284847 54284945 -112365351 + B1_Mur3 SINE Alu 5 97 -52 5 999 697 236 107 17 chrX 54285072 54285249 -112365047 + B3A SINE B2 1 193 -5 5 999 417 271 0 56 chrX 54286464 54286589 -112363707 + B1F2 SINE Alu 1 118 -31 5 999 213 205 0 0 chrX 54286601 54286640 -112363656 + (CAAA)n Simple_repeat Simple_repeat 4 42 0 5 999 205 297 19 19 chrX 54287282 54287384 -112362912 + GA-rich Low_complexity Low_complexity 1 102 0 5 999 411 21 0 0 chrX 54287932 54287980 -112362316 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 999 450 317 103 0 chrX 54288054 54288199 -112362097 - MER45A DNA Tip100 -12 166 7 5 999 2262 163 53 16 chrX 54292009 54292389 -112357907 + ORR1B1 LTR MaLR 1 394 0 5 999 245 302 8 102 chrX 54293303 54293421 -112356875 + LTR88c LTR Genie? 719 825 -37 5 999 490 288 84 35 chrX 54293586 54294122 -112356174 - L1ME1 LINE L1 -12 6166 5604 5 999 1839 141 20 0 chrX 54294811 54295109 -112355187 - Lx2 LINE L1 0 6997 6694 5 999 441 133 0 0 chrX 54295251 54295326 -112354970 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 999 21 0 0 0 chrX 54295384 54295405 -112354891 + AT_rich Low_complexity Low_complexity 1 21 0 5 999 21 0 0 0 chrX 54295977 54295998 -112354298 + AT_rich Low_complexity Low_complexity 1 21 0 5 999 228 135 0 0 chrX 54296905 54296942 -112353354 + (GAAA)n Simple_repeat Simple_repeat 4 40 0 5 999 294 311 17 0 chrX 54298890 54298995 -112351301 + MIR3 SINE MIR 58 162 -46 5 999 203 128 51 0 chrX 54299426 54299465 -112350831 + GA-rich Low_complexity Low_complexity 2 42 0 5 999 296 294 139 25 chrX 54299881 54300003 -112350293 + MamSINE1 SINE tRNA 38 173 -117 5 999 627 276 37 139 chrX 54302125 54302449 -112347847 + B4A SINE B4 2 292 0 5 999 227 103 26 0 chrX 54302460 54302499 -112347797 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 999 208 250 0 0 chrX 54302567 54302623 -112347673 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 999 603 182 440 38 chrX 54302665 54302847 -112347449 - Lx4B LINE L1 -74 6984 6730 5 999 192 97 0 0 chrX 54303109 54303140 -112347156 + (T)n Simple_repeat Simple_repeat 1 31 0 5 999 1195 62 0 7 chrX 54303141 54303287 -112347009 - B1_Mus2 SINE Alu -1 146 2 5 999 306 0 0 0 chrX 54303683 54303717 -112346579 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 999 1316 48 0 0 chrX 54303995 54304141 -112346155 + B1_Mus2 SINE Alu 1 146 -1 5 999 763 27 0 43 chrX 54304673 54304790 -112345506 - L1Md_F2 LINE L1 0 6582 6471 5 999 8464 27 11 0 chrX 54304902 54305832 -112344464 + L1Md_F2 LINE L1 5640 6579 -3 5 999 238 294 87 0 chrX 54305913 54305991 -112344305 + L2b LINE L2 3289 3413 -13 5 999 1247 48 0 0 chrX 54310048 54310194 -112340102 - B1_Mm SINE Alu 0 147 2 5 999 690 298 10 10 chrX 54310333 54310526 -112339770 + MER58A DNA MER1_type 30 222 -2 5 999 570 252 61 118 chrX 54311048 54311277 -112339019 - B3A SINE B2 0 216 1 5 999 322 307 40 0 chrX 54311666 54311767 -112338529 - MIR3 SINE MIR -11 197 93 5 999 369 338 82 10 chrX 54311771 54311977 -112338319 - MIRb SINE MIR -11 257 37 5 999 661 312 45 33 chrX 54314059 54314301 -112335995 + Tigger5 DNA MER2_type 2 243 -2163 5 999 281 273 43 60 chrX 54314295 54314412 -112335884 + Tigger5 DNA MER2_type 2171 2285 -121 5 999 468 265 0 17 chrX 54314846 54314965 -112335331 - B1F SINE Alu 0 149 33 5 999 739 292 0 0 chrX 54315073 54315227 -112335069 + RSINE1 SINE B4 2 155 -10 5 999 248 333 19 19 chrX 54315382 54315486 -112334810 + L2a LINE L2 3284 3387 -39 5 999 233 270 68 0 chrX 54315529 54315603 -112334693 - ID4_ SINE ID -3 80 2 5 999 212 328 98 0 chrX 54316129 54316190 -112334106 - PB1D10 SINE Alu -33 84 18 5 999 561 52 0 0 chrX 54316936 54317013 -112333283 + (CA)n Simple_repeat Simple_repeat 2 78 0 5 999 235 335 0 0 chrX 54319620 54319775 -112330521 + (ATG)n Simple_repeat Simple_repeat 3 157 0 5 999 731 98 143 8 chrX 54320926 54321059 -112329237 + Lx3B LINE L1 6823 6973 0 5 999 299 243 164 27 chrX 54321263 54321373 -112328923 + ID_B1 SINE B4 98 222 -2 5 999 252 0 0 0 chrX 54321572 54321600 -112328696 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 999 870 243 39 10 chrX 54321897 54322101 -112328195 + B3 SINE B2 3 212 -4 5 999 1279 245 22 7 chrX 54322238 54322509 -112327787 + B4A SINE B4 1 275 -17 5 999 419 296 88 39 chrX 54322618 54322822 -112327474 - RMER15 LTR ERVL -15 560 347 5 999 413 300 70 0 chrX 54323388 54323488 -112326808 + RSINE1 SINE B4 18 124 -41 5 999 780 65 0 0 chrX 54323488 54323595 -112326701 + (CA)n Simple_repeat Simple_repeat 2 108 0 5 999 422 286 84 0 chrX 54323722 54323841 -112326455 - ID_B1 SINE B4 -21 203 75 5 999 331 149 42 69 chrX 54323964 54324036 -112326260 - Lx9 LINE L1 -171 7473 7404 5 999 350 205 0 0 chrX 54324037 54324115 -112326181 + Lx9 LINE L1 7536 7613 -31 5 999 518 55 27 0 chrX 54324319 54324392 -112325904 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 5 999 879 251 12 13 chrX 54324392 54324598 -112325698 - B3 SINE B2 -10 206 2 5 999 239 269 128 0 chrX 54325289 54325367 -112324929 - BC1_Mm scRNA scRNA -51 101 14 5 999 255 253 60 12 chrX 54325437 54325521 -112324775 + L2a LINE L2 3336 3423 -3 5 999 275 364 159 0 chrX 54325654 54325849 -112324447 + L2 LINE L2 2538 2763 -656 5 999 557 319 0 0 chrX 54325914 54326058 -112324238 + RSINE1 SINE B4 3 146 -19 5 999 252 317 149 27 chrX 54326264 54326452 -112323844 + L2 LINE L2 2867 3077 -342 5 999 979 132 7 0 chrX 54326460 54326612 -112323684 + L1_Mur2 LINE L1 5238 5390 -487 5 999 2785 144 36 32 chrX 54326614 54327087 -112323209 + Lx4B LINE L1 6580 7054 -4 5 999 2285 61 29 0 chrX 54327441 54327720 -112322576 + L1Md_T LINE L1 6296 6582 0 5 999 600 14 0 0 chrX 54328119 54328188 -112322108 + (GA)n Simple_repeat Simple_repeat 2 70 0 5 999 270 81 0 0 chrX 54328188 54328225 -112322071 + (GGA)n Simple_repeat Simple_repeat 3 39 0 5 999 1279 61 0 22 chrX 54328225 54328409 -112321887 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 5 999 486 0 0 0 chrX 54328410 54328464 -112321832 + (GAGAA)n Simple_repeat Simple_repeat 1 54 0 5 999 192 25 100 0 chrX 54328547 54328587 -112321709 + (TTATA)n Simple_repeat Simple_repeat 4 47 0 5 999 1361 63 114 6 chrX 54328838 54328854 -112321442 - B2_Mm2 SINE B2 0 195 180 6 999 351 0 0 0 chrX 54328854 54328893 -112321403 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 6 999 1361 63 114 6 chrX 54328893 54329052 -112321244 - B2_Mm2 SINE B2 -16 179 1 6 999 762 333 130 60 chrX 54329302 54329865 -112320431 - Tigger9a DNA Tigger -66 666 65 6 999 488 335 37 51 chrX 54329919 54330215 -112320081 - L2 LINE L2 -559 2860 2569 6 999 517 363 91 20 chrX 54330299 54330468 -112319828 - L2 LINE L2 -1171 2248 2068 6 999 2049 127 9 75 chrX 54330468 54330817 -112319479 - ORR1A3 LTR MaLR 0 326 1 6 999 517 363 91 20 chrX 54330817 54331043 -112319253 - L2 LINE L2 -1352 2067 1825 6 999 912 281 83 11 chrX 54331124 54331390 -112318906 + B4A SINE B4 7 291 -1 6 999 305 333 19 75 chrX 54331711 54331870 -112318426 + LTR88b LTR Gypsy? 679 828 -9 6 999 213 229 69 28 chrX 54331948 54332020 -112318276 - MER5A DNA MER1_type -113 76 2 6 999 192 231 0 0 chrX 54333105 54333157 -112317139 + (CACG)n Simple_repeat Simple_repeat 4 55 0 6 999 368 263 76 8 chrX 54335061 54335180 -112315116 + MIR SINE MIR 80 206 -56 6 999 1178 30 0 35 chrX 54335326 54335496 -112314800 + LTRIS2 LTR ERV1 322 485 -79 6 999 37 0 0 0 chrX 54335496 54335533 -112314763 + AT_rich Low_complexity Low_complexity 1 37 0 6 999 405 0 0 0 chrX 54335665 54335710 -112314586 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 999 21 0 0 0 chrX 54336115 54336136 -112314160 + AT_rich Low_complexity Low_complexity 1 21 0 6 999 465 19 0 0 chrX 54336788 54336842 -112313454 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 999 23 0 0 0 chrX 54337505 54337528 -112312768 + AT_rich Low_complexity Low_complexity 1 23 0 6 999 278 212 15 15 chrX 54337534 54337591 -112312705 + CT-rich Low_complexity Low_complexity 11 68 0 6 999 324 120 0 0 chrX 54337591 54337641 -112312655 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 999 225 298 0 0 chrX 54338096 54338153 -112312143 - L2a LINE L2 0 3426 3370 6 999 880 264 88 68 chrX 54338372 54338726 -112311570 + L1MA4 LINE L1 5578 5938 -362 6 999 277 312 18 0 chrX 54338734 54338843 -112311453 + (TG)n Simple_repeat Simple_repeat 2 112 0 6 999 315 49 0 0 chrX 54338854 54338895 -112311401 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 999 944 86 0 58 chrX 54339364 54339537 -112310759 + Lx3_Mus LINE L1 6847 7009 0 6 999 389 20 20 0 chrX 54339891 54339941 -112310355 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 999 186 0 88 0 chrX 54339943 54339977 -112310319 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 999 391 182 124 62 chrX 54340200 54340357 -112309939 - Lx4B LINE L1 0 7058 6862 6 999 1251 151 0 0 chrX 54340408 54340613 -112309683 - URR1A DNA MER1_type -5 221 17 6 999 330 367 0 9 chrX 54341885 54341995 -112308301 - PB1 SINE Alu -18 109 1 6 999 208 294 182 0 chrX 54342753 54342879 -112307417 + MIRb SINE MIR 115 263 -5 6 999 382 170 170 0 chrX 54342971 54343065 -112307231 - L1ME3 LINE L1 -3 6159 6050 6 999 364 266 25 10 chrX 54343072 54343171 -112307125 + PB1D10 SINE Alu 6 111 -16 6 999 267 79 0 0 chrX 54343184 54343222 -112307074 + (TGGG)n Simple_repeat Simple_repeat 2 39 0 6 999 180 0 0 0 chrX 54343222 54343242 -112307054 + (TGG)n Simple_repeat Simple_repeat 1 20 0 6 999 470 259 124 22 chrX 54343270 54343448 -112306848 - L1ME3 LINE L1 -134 6028 5833 6 999 486 239 13 47 chrX 54343595 54343608 -112306688 + ID_B1 SINE B4 70 209 -11 6 999 613 191 15 45 chrX 54343608 54343740 -112306556 + B1_Mus2 SINE Alu 3 130 -17 6 999 1451 47 0 31 chrX 54344389 54344585 -112305711 + L1_Mus2 LINE L1 6376 6565 -1 6 999 25 0 0 0 chrX 54345311 54345336 -112304960 + AT_rich Low_complexity Low_complexity 1 25 0 6 999 234 0 0 0 chrX 54345728 54345754 -112304542 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 999 258 288 107 53 chrX 54346260 54346447 -112303849 - ORSL DNA Tip100 -75 200 4 6 999 985 229 13 35 chrX 54346944 54347170 -112303126 + ID_B1 SINE B4 4 224 0 6 999 351 0 0 0 chrX 54349588 54349627 -112300669 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 999 239 284 0 43 chrX 54349674 54349766 -112300530 + GA-rich Low_complexity Low_complexity 3 90 0 6 999 420 283 42 0 chrX 54349861 54349981 -112300315 + PB1 SINE Alu 1 125 -2 6 999 1146 124 16 0 chrX 54350288 54350474 -112299822 + L1_Mus3 LINE L1 6449 6637 -1 6 999 297 290 8 16 chrX 54350643 54350769 -112299527 + (TATATG)n Simple_repeat Simple_repeat 4 128 0 6 999 4506 64 25 7 chrX 54352935 54353533 -112296763 - L1_Mus3 LINE L1 -1 6637 6029 6 999 528 243 29 0 chrX 54354193 54354333 -112295963 - B1F SINE Alu -1 148 5 6 999 511 248 16 16 chrX 54354483 54354606 -112295690 + RSINE1 SINE B4 2 124 -41 6 999 222 136 0 0 chrX 54354673 54354717 -112295579 + (TA)n Simple_repeat Simple_repeat 1 44 0 6 999 766 178 12 0 chrX 54356140 54356303 -112293993 + (TA)n Simple_repeat Simple_repeat 1 165 0 6 999 328 267 45 54 chrX 54356667 54356778 -112293518 - RMER12 LTR ERVK -471 851 742 6 999 442 312 29 13 chrX 54357751 54357966 -112292330 + MIR SINE MIR 21 238 -30 6 999 243 0 0 0 chrX 54358017 54358044 -112292252 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 999 277 163 82 0 chrX 54360685 54360734 -112289562 + B2_Mm2 SINE B2 1 53 -142 6 999 388 232 29 29 chrX 54360754 54360856 -112289440 + B3 SINE B2 115 216 0 6 999 319 288 12 24 chrX 54361115 54361197 -112289099 - B4A SINE B4 -188 104 24 6 999 2191 248 39 21 chrX 54361338 54362281 -112288015 + Lx6 LINE L1 6190 7432 -28 6 999 378 0 0 0 chrX 54362350 54362392 -112287904 + (TTCC)n Simple_repeat Simple_repeat 1 42 0 6 999 1068 102 17 6 chrX 54362392 54362570 -112287726 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 999 601 233 0 8 chrX 54362580 54362710 -112287586 - B1_Mur4 SINE Alu -21 129 1 6 999 215 261 22 0 chrX 54362908 54362954 -112287342 + B1F1 SINE Alu 2 48 -101 6 999 206 71 0 97 chrX 54362962 54363024 -112287272 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 6 999 311 242 53 0 chrX 54363040 54363135 -112287161 - ID_B1 SINE B4 -8 216 117 6 999 346 261 121 43 chrX 54363219 54363359 -112286937 + MIR3 SINE MIR 33 183 -25 6 999 2629 167 18 9 chrX 54363419 54363871 -112286425 + Lx3C LINE L1 6395 6850 -126 6 999 1489 181 10 20 chrX 54363872 54364176 -112286120 + RLTR10E LTR ERVK 1 301 -10 6 999 24 0 0 0 chrX 54364221 54364245 -112286051 + AT_rich Low_complexity Low_complexity 1 24 0 6 999 637 188 58 29 chrX 54364344 54364481 -112285815 + B1_Mur1 SINE Alu 2 142 -7 6 999 358 269 54 36 chrX 54364495 54364607 -112285689 + B1F SINE Alu 36 149 0 6 999 236 375 76 0 chrX 54364750 54364894 -112285402 + LTR16B1 LTR ERVL 190 344 -136 6 999 251 337 28 19 chrX 54365237 54365343 -112284953 + MER5A DNA MER1_type 19 125 -64 6 999 871 258 55 55 chrX 54365369 54365565 -112284731 - MLT1D LTR MaLR -1 504 305 6 999 795 127 355 0 chrX 54365565 54365731 -112284565 - URR1A DNA MER1_type -1 225 1 6 999 871 258 55 55 chrX 54365731 54365879 -112284417 - MLT1D LTR MaLR -201 304 160 6 999 259 267 19 19 chrX 54366179 54366286 -112284010 + L1M5 LINE L1 5675 5781 -343 6 999 260 339 30 30 chrX 54366439 54366640 -112283656 + L1MC LINE L1 5687 5887 -1995 6 999 371 21 21 0 chrX 54366690 54366738 -112283558 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 999 271 312 0 11 chrX 54367184 54367278 -112283018 + L1MB2 LINE L1 6054 6146 -25 6 999 228 228 0 34 chrX 54367299 54367358 -112282938 - B3 SINE B2 -6 210 154 6 999 303 256 88 93 chrX 54368142 54368380 -112281916 + L1M4 LINE L1 2831 3066 -2811 6 999 208 0 62 0 chrX 54368380 54368412 -112281884 + (TGGGGG)n Simple_repeat Simple_repeat 2 35 0 6 999 317 244 25 13 chrX 54369130 54369209 -112281087 + ID4_ SINE ID 3 82 -1 6 999 312 369 9 0 chrX 54369537 54369648 -112280648 + MER81 DNA AcHobo 2 113 -1 6 999 3495 72 17 6 chrX 54369799 54370276 -112280020 - L1_Mus3 LINE L1 -6 6632 6151 6 999 543 149 0 0 chrX 54370434 54370528 -112279768 - B1_Mur3 SINE Alu -39 110 17 6 999 500 320 118 9 chrX 54372742 54372953 -112277343 - MIRb SINE MIR -9 259 26 6 999 3399 37 2 0 chrX 54373358 54373761 -112276535 + L1Md_T LINE L1 6179 6582 0 6 999 1816 231 73 29 chrX 54374174 54374656 -112275640 + Lx7 LINE L1 6917 7419 -277 6 999 324 0 0 0 chrX 54374787 54374823 -112275473 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 6 999 1160 55 7 7 chrX 54374824 54374971 -112275325 - B1_Mm SINE Alu 0 147 1 6 999 1401 72 39 0 chrX 54375119 54375300 -112274996 + B2_Mm2 SINE B2 1 188 -7 6 999 543 236 57 0 chrX 54375642 54375765 -112274531 + B1_Mur2 SINE Alu 2 131 -18 6 999 498 33 0 0 chrX 54375773 54375833 -112274463 + (GA)n Simple_repeat Simple_repeat 1 60 0 6 999 524 168 53 0 chrX 54376201 54376296 -112274000 + RSINE1 SINE B4 45 144 -21 6 999 351 44 0 0 chrX 54376301 54376346 -112273950 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 999 1220 244 19 11 chrX 54376806 54377067 -112273229 - Lx5 LINE L1 0 7050 6788 6 999 2945 39 2 145 chrX 54377554 54378009 -112272287 - RLTR10 LTR ERVK 0 390 1 6 999 2806 93 21 121 chrX 54378025 54378553 -112271743 - IAPLTR2_Mm LTR ERVK 0 475 1 6 999 315 0 0 0 chrX 54378853 54378888 -112271408 + (TA)n Simple_repeat Simple_repeat 1 35 0 6 999 565 254 67 7 chrX 54379546 54379681 -112270615 - B1_Mur2 SINE Alu -6 143 1 6 999 788 270 5 20 chrX 54379741 54379945 -112270351 - B3 SINE B2 -2 214 14 6 999 216 0 0 0 chrX 54379945 54379969 -112270327 + (TC)n Simple_repeat Simple_repeat 1 24 0 6 999 315 49 0 0 chrX 54379969 54380009 -112270287 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 999 499 282 8 0 chrX 54380143 54380267 -112270029 + ID_B1 SINE B4 89 213 -11 7 999 9001 110 42 12 chrX 54382256 54382834 -112267462 + Lx2 LINE L1 5444 6028 -969 7 999 198 0 0 0 chrX 54382834 54382856 -112267440 + (GGGA)n Simple_repeat Simple_repeat 3 24 0 7 999 9001 109 50 16 chrX 54382856 54383776 -112266520 + Lx2 LINE L1 6029 6993 -4 7 999 186 118 0 0 chrX 54383801 54383835 -112266461 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 7 999 449 301 18 0 chrX 54384162 54384275 -112266021 + RSINE1 SINE B4 4 118 -47 7 999 374 299 90 47 chrX 54384471 54384727 -112265569 - L1MB7 LINE L1 -304 5880 5614 7 999 412 280 0 29 chrX 54384744 54384847 -112265449 + RSINE1 SINE B4 37 136 -29 7 999 271 253 88 12 chrX 54384877 54384957 -112265339 - L1MB7 LINE L1 -551 5633 5548 7 999 399 283 171 0 chrX 54385116 54385268 -112265028 + MER5B DNA MER1_type 1 178 0 7 999 212 184 0 0 chrX 54385528 54385566 -112264730 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 7 999 26 50 0 0 chrX 54385651 54385691 -112264605 + AT_rich Low_complexity Low_complexity 1 40 0 7 999 482 220 90 18 chrX 54385704 54385871 -112264425 + Lx9 LINE L1 7466 7644 0 7 999 4557 72 8 2 chrX 54385884 54386482 -112263814 - Lx3_Mus LINE L1 -9 7000 6399 7 999 1508 51 0 5 chrX 54386708 54386906 -112263390 - L1Md_F2 LINE L1 0 6582 6386 7 999 505 340 22 49 chrX 54387519 54387745 -112262551 + MLT1A0 LTR MaLR 1 220 -145 7 999 3279 162 9 2 chrX 54388179 54388705 -112261591 - RLTR17 LTR ERVK -65 627 98 7 999 368 287 30 65 chrX 54388721 54388849 -112261447 + B4 SINE B4 26 152 -140 7 999 588 271 90 37 chrX 54389683 54389871 -112260425 + B3A SINE B2 1 198 0 7 999 23 33 0 0 chrX 54389878 54389908 -112260388 + AT_rich Low_complexity Low_complexity 1 30 0 7 999 876 214 197 0 chrX 54389912 54390090 -112260206 - B3 SINE B2 0 216 4 7 999 763 252 0 33 chrX 54390132 54390284 -112260012 - RSINE1 SINE B4 -18 147 1 7 999 918 244 28 28 chrX 54390426 54390637 -112259659 - B3 SINE B2 -4 212 2 7 999 843 262 42 28 chrX 54390645 54390857 -112259439 - ID_B1 SINE B4 -9 215 1 7 999 316 287 103 52 chrX 54391877 54392013 -112258283 + B1F2 SINE Alu 2 144 -5 7 999 291 266 63 0 chrX 54392033 54392112 -112258184 + BC1_Mm scRNA scRNA 3 86 -66 7 999 665 12 12 0 chrX 54392362 54392444 -112257852 + (TC)n Simple_repeat Simple_repeat 1 83 0 7 999 180 312 62 0 chrX 54392517 54392581 -112257715 - L2b LINE L2 -70 3305 3238 7 999 796 229 15 124 chrX 54392741 54393000 -112257296 + MER2 DNA MER2_type 114 344 -1 7 999 530 351 46 28 chrX 54393000 54393322 -112256974 + MER63B DNA AcHobo 109 436 0 7 999 777 307 78 64 chrX 54393432 54393714 -112256582 + B4A SINE B4 1 286 -6 7 999 236 157 38 38 chrX 54393715 54393768 -112256528 + (CATG)n Simple_repeat Simple_repeat 1 53 0 7 999 546 29 0 0 chrX 54393768 54393836 -112256460 + (CA)n Simple_repeat Simple_repeat 1 68 0 7 999 286 269 0 0 chrX 54394068 54394120 -112256176 + ID4_ SINE ID 18 69 -14 7 999 183 80 0 0 chrX 54394186 54394211 -112256085 + (GGA)n Simple_repeat Simple_repeat 2 26 0 7 999 580 211 89 0 chrX 54394343 54394466 -112255830 + B1F SINE Alu 9 142 -7 7 999 183 156 0 0 chrX 54394466 54394498 -112255798 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 7 1000 2494 277 47 15 chrX 54395115 54395844 -112254452 + Lx8 LINE L1 6370 7121 -352 7 1000 497 167 28 33 chrX 54395962 54396142 -112254154 + GA-rich Low_complexity Low_complexity 2 180 0 7 1000 203 312 15 15 chrX 54396255 54396320 -112253976 - MIRm SINE MIR -2 274 210 7 1000 250 217 0 32 chrX 54396344 54396406 -112253890 + B1_Mus1 SINE Alu 1 60 -88 7 1000 264 0 0 159 chrX 54396407 54396539 -112253757 + (CAGAG)n Simple_repeat Simple_repeat 5 115 0 7 1000 553 148 0 59 chrX 54396542 54396656 -112253640 + B1_Mur3 SINE Alu 42 141 -6 7 1000 726 203 8 0 chrX 54396659 54396782 -112253514 + B3 SINE B2 7 130 -86 7 1000 28 0 0 0 chrX 54396820 54396848 -112253448 + AT_rich Low_complexity Low_complexity 1 28 0 7 1000 234 288 100 57 chrX 54397545 54397685 -112252611 - MIRb SINE MIR -2 266 121 7 1000 935 289 65 114 chrX 54397721 54398213 -112252083 - L1MD2 LINE L1 -230 6520 6053 7 1000 467 290 86 22 chrX 54398191 54398459 -112251837 - L1MD2 LINE L1 -2767 3770 3486 7 1000 454 259 19 0 chrX 54398461 54398569 -112251727 - ID_B1 SINE B4 0 224 115 7 1000 565 304 20 12 chrX 54398585 54398831 -112251465 - L1MD2 LINE L1 -3053 3484 3237 7 1000 635 282 84 61 chrX 54398829 54399421 -112250875 - L1MD2 LINE L1 -4115 2518 1913 7 1000 829 219 5 103 chrX 54399469 54399683 -112250613 - MTEa LTR MaLR -1 378 186 7 1000 1049 299 158 8 chrX 54399683 54400182 -112250114 - Lx8 LINE L1 -69 7404 6831 7 1000 1209 275 7 11 chrX 54400207 54400490 -112249806 + Lx8 LINE L1 6197 6478 -995 7 1000 330 164 18 0 chrX 54400677 54400732 -112249564 + B4 SINE B4 43 98 -194 7 1000 256 232 0 42 chrX 54400809 54400881 -112249415 + RSINE1 SINE B4 85 153 -12 7 1000 617 254 31 0 chrX 54401371 54401501 -112248795 - ID_B1 SINE B4 -10 214 81 7 1000 291 355 142 31 chrX 54401724 54402041 -112248255 + L2b LINE L2 2474 2825 -594 7 1000 1002 255 139 21 chrX 54402058 54402390 -112247906 + MTEb LTR MaLR 9 379 0 7 1000 222 320 47 87 chrX 54402455 54402725 -112247571 + L2b LINE L2 2933 3211 -176 7 1000 683 321 86 7 chrX 54402841 54403120 -112247176 - MLT1C LTR MaLR 0 467 167 7 1000 244 338 148 12 chrX 54403177 54403258 -112247038 - B4 SINE B4 -1 291 200 7 1000 1423 129 40 0 chrX 54403261 54403485 -112246811 - Lx2 LINE L1 0 6997 6765 7 1000 1587 94 49 5 chrX 54403485 54403709 -112246587 - Lx2 LINE L1 -363 6634 6401 7 1000 339 277 5 0 chrX 54403717 54403807 -112246489 + PB1D7 SINE Alu 21 112 -8 7 1000 285 357 106 68 chrX 54404633 54404870 -112245426 + MLT1K LTR MaLR 181 426 -169 7 1000 623 312 13 16 chrX 54405175 54405362 -112244934 - ID_B1 SINE B4 -41 251 67 7 1000 225 260 0 0 chrX 54405806 54405856 -112244440 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1000 428 273 97 128 chrX 54405856 54406154 -112244142 - B4A SINE B4 0 292 4 7 1000 7882 135 67 5 chrX 54407230 54408524 -112241772 - Lx4B LINE L1 -7 7051 5679 7 1000 761 129 73 0 chrX 54408520 54408644 -112241652 + Lx4B LINE L1 5569 5701 -176 7 1000 3928 213 101 99 chrX 54408643 54409839 -112240457 - Lx7 LINE L1 -8 7688 6490 7 1000 304 194 0 5 chrX 54409837 54409901 -112240395 - Lx7 LINE L1 -887 6809 6738 7 1000 230 245 0 0 chrX 54409942 54409991 -112240305 - L1M2 LINE L1 -1221 4919 4871 7 1000 766 123 85 34 chrX 54409999 54410175 -112240121 - Lx4B LINE L1 -845 6213 6029 7 1000 201 82 25 76 chrX 54410183 54410262 -112240034 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 7 1000 1208 271 93 10 chrX 54410264 54410759 -112239537 - L1M2 LINE L1 -1269 4874 4339 7 1000 469 294 33 114 chrX 54410812 54410966 -112239330 + L1MA5 LINE L1 6018 6173 -127 7 1000 1352 97 27 0 chrX 54410966 54411152 -112239144 + B2_Mm2 SINE B2 2 192 -3 7 1000 469 294 33 114 chrX 54411152 54411304 -112238992 + L1MA5 LINE L1 6174 6299 -1 7 1000 773 288 138 10 chrX 54411961 54412273 -112238023 + ORR1E LTR MaLR 3 354 -5 7 1000 2343 223 122 7 chrX 54412700 54413243 -112237053 + Lx8 LINE L1 6728 7332 -141 7 1000 5168 136 5 3 chrX 54413377 54414123 -112236173 - Lx LINE L1 -1 6653 5906 7 1000 2423 183 32 81 chrX 54414457 54415023 -112235273 - RMER15 LTR ERVL -11 564 27 7 1000 380 328 0 29 chrX 54415666 54415804 -112234492 - MLT1B LTR MaLR 0 390 257 7 1000 491 112 12 0 chrX 54415834 54415914 -112234382 + (GA)n Simple_repeat Simple_repeat 1 81 0 7 1000 2744 126 5 9 chrX 54415914 54416340 -112233956 - RMER19A LTR ERVK -313 424 1 7 1000 641 216 51 29 chrX 54416867 54417005 -112233291 - B1F2 SINE Alu -7 142 2 7 1000 455 252 92 18 chrX 54417123 54417232 -112233064 + PB1D7 SINE Alu 1 117 -3 7 1000 248 203 16 78 chrX 54417284 54417348 -112232948 + MER5A DNA MER1_type 112 171 -18 7 1000 857 206 0 0 chrX 54417417 54417558 -112232738 + B1_Mur2 SINE Alu 3 143 -6 7 1000 274 247 111 102 chrX 54417563 54417807 -112232489 - L1MC4 LINE L1 -91 7951 7706 7 1000 350 295 174 51 chrX 54417992 54418267 -112232029 + L2a LINE L2 1894 2202 -1217 7 1000 269 209 138 11 chrX 54418305 54418392 -112231904 + L2a LINE L2 2743 2840 -579 7 1000 350 333 114 87 chrX 54418721 54418985 -112231311 + L2a LINE L2 2956 3254 -172 7 1000 195 42 0 0 chrX 54418985 54419009 -112231287 + (CAT)n Simple_repeat Simple_repeat 1 24 0 7 1000 350 300 140 52 chrX 54419009 54419157 -112231139 + L2a LINE L2 3217 3407 -19 7 1000 460 303 198 38 chrX 54419390 54419627 -112230669 - B4 SINE B4 -16 276 2 7 1000 574 289 7 7 chrX 54419639 54419782 -112230514 - ID_B1 SINE B4 0 224 82 7 1000 243 0 0 0 chrX 54420123 54420150 -112230146 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 1000 486 0 0 0 chrX 54420150 54420203 -112230093 + (GA)n Simple_repeat Simple_repeat 1 54 0 7 1000 373 252 0 142 chrX 54420247 54420367 -112229929 + PB1D10 SINE Alu 15 117 0 7 1000 1444 247 69 34 chrX 54421927 54422363 -112227933 + Lx8 LINE L1 6953 7403 -70 7 1000 849 276 96 16 chrX 54422608 54422921 -112227375 + L1MB7 LINE L1 5769 6106 -78 7 1000 390 275 56 28 chrX 54422961 54423103 -112227193 - L1MB1 LINE L1 -232 6068 5923 7 1000 342 204 112 0 chrX 54423114 54423212 -112227084 + Lx9 LINE L1 7534 7642 -2 7 1000 778 274 18 54 chrX 54423205 54423429 -112226867 - L1MB1 LINE L1 -374 5926 5711 7 1000 494 283 0 0 chrX 54423482 54423602 -112226694 - PB1D7 SINE Alu 0 120 1 7 1000 504 274 0 0 chrX 54423617 54423730 -112226566 + PB1D10 SINE Alu 4 116 -1 7 1000 230 262 0 0 chrX 54423749 54423810 -112226486 - Charlie14a DNA MER1_type -16 1148 1088 7 1000 1310 53 0 6 chrX 54423847 54424019 -112226277 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 7 1000 1193 71 0 0 chrX 54424021 54424162 -112226134 - B1_Mm SINE Alu -6 141 1 7 1000 579 274 99 17 chrX 54424315 54424608 -112225688 - Charlie14a DNA MER1_type -205 959 643 7 1000 334 283 119 33 chrX 54424949 54425104 -112225192 - MTEb LTR MaLR -185 194 20 7 1000 383 314 118 28 chrX 54425116 54425260 -112225036 - RSINE1 SINE B4 -5 160 4 7 1000 252 361 52 30 chrX 54425362 54425496 -112224800 + ORR1E LTR MaLR 81 217 -142 8 1000 342 123 0 0 chrX 54425635 54425692 -112224604 + (TATG)n Simple_repeat Simple_repeat 3 59 0 8 1000 288 136 23 0 chrX 54425753 54425797 -112224499 - B3A SINE B2 -117 81 37 8 1000 217 258 95 16 chrX 54425754 54425817 -112224479 - B4 SINE B4 -212 80 13 8 1000 868 197 7 13 chrX 54425885 54426034 -112224262 + B1_Mur3 SINE Alu 1 148 -1 8 1000 219 273 91 0 chrX 54426038 54426093 -112224203 + B4 SINE B4 24 83 -209 8 1000 576 227 91 0 chrX 54426045 54426177 -112224119 + B3A SINE B2 36 179 -19 8 1000 605 260 24 0 chrX 54426262 54426389 -112223907 - B4A SINE B4 -162 130 1 8 1000 225 294 147 0 chrX 54426392 54426494 -112223802 - MIR SINE MIR -43 219 103 8 1000 426 39 0 0 chrX 54426514 54426566 -112223730 + (CA)n Simple_repeat Simple_repeat 1 52 0 8 1000 380 315 110 30 chrX 54426657 54426881 -112223415 + MIRb SINE MIR 1 255 -13 8 1000 810 262 36 23 chrX 54427395 54427614 -112222682 + ID_B1 SINE B4 3 224 0 8 1000 3447 43 0 2 chrX 54427648 54428043 -112222253 - L1Md_F3 LINE L1 -14 6570 6177 8 1000 1064 155 157 15 chrX 54428169 54428366 -112221930 - URR1A DNA MER1_type -1 225 1 8 1000 1333 275 167 24 chrX 54429194 54429776 -112220520 + Lx8 LINE L1 6807 7471 -2 8 1000 525 71 0 0 chrX 54429783 54429853 -112220443 + (TG)n Simple_repeat Simple_repeat 1 70 0 8 1000 266 274 104 0 chrX 54429916 54429957 -112220339 + MIR SINE MIR 104 144 -118 8 1000 243 0 0 0 chrX 54429957 54429984 -112220312 + (TAA)n Simple_repeat Simple_repeat 2 28 0 8 1000 266 274 104 0 chrX 54429984 54430048 -112220248 + MIR SINE MIR 145 219 -43 8 1000 7147 160 52 2 chrX 54431133 54432268 -112218028 - Lx5 LINE L1 -7 7043 5852 8 1000 381 321 148 11 chrX 54432317 54432506 -112217790 + L2a LINE L2 3211 3425 -1 8 1000 193 288 40 27 chrX 54432941 54433016 -112217280 - MIRc SINE MIR -76 192 117 8 1000 212 309 49 28 chrX 54433831 54433962 -112216334 + MIR SINE MIR 39 173 -95 8 1000 207 0 0 0 chrX 54434158 54434181 -112216115 + (T)n Simple_repeat Simple_repeat 1 23 0 8 1000 1224 311 61 5 chrX 54435132 54435543 -112214753 + MLT1C LTR MaLR 1 434 -33 8 1000 188 364 0 0 chrX 54436123 54436200 -112214096 + MER5A DNA MER1_type 73 149 -40 8 1000 784 310 20 16 chrX 54437319 54437565 -112212731 + B4A SINE B4 42 288 -4 8 1000 189 0 0 0 chrX 54437603 54437624 -112212672 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 1000 486 335 25 19 chrX 54439021 54439179 -112211117 + RSINE1 SINE B4 3 161 -4 8 1000 276 30 0 0 chrX 54440460 54440493 -112209803 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 8 1000 311 295 105 8 chrX 54440527 54440660 -112209636 + L1ME4a LINE L1 5973 6118 -6 8 1000 524 277 112 112 chrX 54441581 54441866 -112208430 + B4A SINE B4 2 286 -6 8 1000 270 0 0 0 chrX 54441877 54441907 -112208389 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 1000 475 269 27 32 chrX 54442210 54442398 -112207898 + L1MB8 LINE L1 5992 6178 0 8 1000 342 0 0 0 chrX 54443146 54443184 -112207112 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 1000 599 327 71 12 chrX 54443196 54443450 -112206846 - Lx9 LINE L1 -182 7462 7194 8 1000 513 358 37 37 chrX 54443710 54443951 -112206345 + MLT1E1A LTR MaLR 1 241 -439 8 1000 3006 127 72 49 chrX 54444160 54444672 -112205624 + RLTR11A LTR ERVK 5 528 0 8 1000 1656 222 47 29 chrX 54445344 54445725 -112204571 - MTD LTR MaLR -12 407 20 8 1000 183 100 0 0 chrX 54445727 54445757 -112204539 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 8 1000 767 292 42 19 chrX 54445834 54446050 -112204246 + ID_B1 SINE B4 3 223 -1 8 1000 4295 177 66 73 chrX 54446320 54447227 -112203069 - RMER19B LTR ERVK 0 902 2 8 1000 250 288 14 0 chrX 54447367 54447440 -112202856 + GA-rich Low_complexity Low_complexity 1 74 0 8 1000 763 124 0 0 chrX 54447440 54447545 -112202751 + B1_Mus1 SINE Alu 36 140 -8 8 1000 230 51 51 0 chrX 54447555 54447594 -112202702 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 8 1000 228 67 0 0 chrX 54447638 54447668 -112202628 + (TCC)n Simple_repeat Simple_repeat 3 32 0 8 1000 639 334 145 28 chrX 54448524 54449029 -112201267 - LTR48B LTR ERV1 -7 637 74 8 1000 213 281 94 0 chrX 54449936 54450000 -112200296 + B4A SINE B4 81 150 -142 8 1000 449 251 0 15 chrX 54449944 54450051 -112200245 + B1F SINE Alu 10 112 -5 8 1000 391 237 51 26 chrX 54450176 54450293 -112200003 - PB1D7 SINE Alu 0 120 1 8 1000 276 100 0 0 chrX 54450473 54450513 -112199783 + (A)n Simple_repeat Simple_repeat 1 40 0 8 1000 902 148 6 0 chrX 54450739 54450901 -112199395 + CT-rich Low_complexity Low_complexity 2 164 0 8 1000 247 276 103 19 chrX 54452077 54452184 -112198112 - L2a LINE L2 -8 3418 3303 8 1000 1096 87 37 0 chrX 54452187 54452348 -112197948 - URR1B DNA MER1_type -1 224 58 8 1000 200 111 0 27 chrX 54452348 54452385 -112197911 + (TC)n Simple_repeat Simple_repeat 2 37 0 8 1000 357 24 0 0 chrX 54452385 54452427 -112197869 + (TG)n Simple_repeat Simple_repeat 1 42 0 8 1000 1217 37 0 0 chrX 54452766 54452901 -112197395 + B1_Mus2 SINE Alu 2 136 -11 8 1000 233 29 29 0 chrX 54452901 54452935 -112197361 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 1000 927 0 0 0 chrX 54452935 54453037 -112197259 + (GAA)n Simple_repeat Simple_repeat 2 104 0 8 1000 269 347 23 39 chrX 54453865 54453994 -112196302 + MIR3 SINE MIR 14 140 -68 8 1000 518 239 168 58 chrX 54455352 54455543 -112194753 + B3 SINE B2 2 213 -3 8 1000 332 245 39 0 chrX 54455610 54455712 -112194584 + L1MD LINE L1 5417 5522 -837 8 1000 260 209 264 11 chrX 54455821 54455908 -112194388 + L1ME3A LINE L1 6057 6165 -8 8 1000 607 282 13 7 chrX 54456076 54456226 -112194070 + RSINE1 SINE B4 8 158 -7 8 1000 1294 54 0 0 chrX 54456335 54456482 -112193814 + B1_Mus2 SINE Alu 1 147 0 8 1000 252 0 0 0 chrX 54456482 54456510 -112193786 + (A)n Simple_repeat Simple_repeat 1 28 0 8 1000 289 102 102 0 chrX 54456510 54456559 -112193737 + B1F SINE Alu 86 139 -10 8 1000 182 250 180 16 chrX 54456921 54456982 -112193314 + L2b LINE L2 3304 3374 -1 8 1000 290 136 0 0 chrX 54457207 54457251 -112193045 + B1_Mus2 SINE Alu 98 141 -6 8 1000 180 97 0 0 chrX 54457252 54457283 -112193013 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 1000 2797 188 105 35 chrX 54457737 54458425 -112191871 - RLTR40 LTR ERVK -78 739 4 8 1000 421 208 97 32 chrX 54458688 54458812 -112191484 - Lx8 LINE L1 -254 7219 7088 8 1000 2123 262 39 16 chrX 54458799 54459665 -112190631 + Lx7 LINE L1 5455 6352 -1344 8 1000 288 0 0 0 chrX 54459699 54459731 -112190565 + (TTG)n Simple_repeat Simple_repeat 2 33 0 8 1000 1177 71 0 0 chrX 54459731 54459871 -112190425 - B1_Mus2 SINE Alu -7 140 1 8 1000 188 237 49 33 chrX 54459897 54459958 -112190338 - L3 LINE CR1 -3550 939 878 8 1000 304 315 64 9 chrX 54460278 54460387 -112189909 + PB1D9 SINE Alu 1 115 -5 8 1000 236 213 16 0 chrX 54460562 54460623 -112189673 + CT-rich Low_complexity Low_complexity 3 64 0 8 1000 594 0 0 0 chrX 54460625 54460691 -112189605 + (TC)n Simple_repeat Simple_repeat 1 66 0 8 1000 288 0 0 0 chrX 54460693 54460725 -112189571 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 1000 1145 200 5 0 chrX 54460737 54460927 -112189369 - B3 SINE B2 -25 191 1 8 1000 361 263 109 7 chrX 54461452 54461590 -112188706 - Charlie22a DNA MER1_type -56 435 284 8 1000 326 283 43 11 chrX 54461900 54461993 -112188303 - PB1D10 SINE Alu 0 117 22 8 1000 264 111 0 0 chrX 54462208 54462253 -112188043 + (GGA)n Simple_repeat Simple_repeat 3 47 0 8 1000 298 326 0 23 chrX 54462333 54462421 -112187875 + polypurine Low_complexity Low_complexity 4 89 0 8 1000 195 339 89 35 chrX 54462572 54462829 -112187467 - L2 LINE L2 -649 2770 2500 8 1000 819 164 0 22 chrX 54462936 54463073 -112187223 - B1_Mur3 SINE Alu -1 148 15 8 1000 264 305 12 47 chrX 54464409 54464495 -112185801 - MIR SINE MIR -94 114 32 8 1000 246 62 0 0 chrX 54465118 54465150 -112185146 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 8 1000 364 371 81 0 chrX 54465644 54465854 -112184442 + MIR SINE MIR 15 241 -21 8 1000 538 279 22 0 chrX 54466396 54466532 -112183764 - B1F SINE Alu -7 142 4 8 1000 370 265 20 30 chrX 54467370 54467471 -112182825 + PB1D7 SINE Alu 1 100 -20 8 1000 203 347 0 0 chrX 54467486 54467558 -112182738 + (TA)n Simple_repeat Simple_repeat 1 72 0 8 1000 510 285 73 0 chrX 54467726 54467849 -112182447 - RSINE1 SINE B4 -32 133 2 8 1000 252 386 0 0 chrX 54468975 54469063 -112181233 - L3 LINE CR1 -73 4416 4329 8 1000 640 294 20 0 chrX 54470104 54470257 -112180039 + ID_B1 SINE B4 69 224 0 8 1000 271 340 30 144 chrX 54471464 54471797 -112178499 - L3 LINE CR1 -110 4379 4085 8 1000 4997 43 17 0 chrX 54471933 54472514 -112177782 + L1Md_F2 LINE L1 5979 6569 -13 8 1000 366 146 0 0 chrX 54473795 54473877 -112176419 + (GA)n Simple_repeat Simple_repeat 1 82 0 8 1000 411 300 82 0 chrX 54474655 54474765 -112175531 + ID_B1 SINE B4 93 211 -13 8 1000 454 237 16 0 chrX 54474783 54474885 -112175411 + B1_Mur1 SINE Alu 36 143 -6 8 1000 330 313 19 62 chrX 54475667 54475827 -112174469 - B4A SINE B4 -19 273 121 9 1000 440 281 56 28 chrX 54475840 54475983 -112174313 - B1F1 SINE Alu -2 147 1 9 1000 307 289 89 16 chrX 54477246 54477369 -112172927 - HAL1-3A_ME LINE L1 -55 2803 2672 9 1000 360 0 0 0 chrX 54477369 54477409 -112172887 + (TC)n Simple_repeat Simple_repeat 2 41 0 9 1000 696 35 0 0 chrX 54477409 54477496 -112172800 + (CA)n Simple_repeat Simple_repeat 1 87 0 9 1000 425 232 22 104 chrX 54478796 54479065 -112171231 - Lx9 LINE L1 -1 7643 7397 9 1000 393 282 62 31 chrX 54479262 54479390 -112170906 + B1F1 SINE Alu 1 132 -17 9 1000 322 287 49 10 chrX 54479790 54479892 -112170404 - B1F SINE Alu -33 116 11 9 1000 237 243 13 79 chrX 54480081 54480093 -112170203 - PB1D10 SINE Alu -43 74 17 9 1000 538 250 7 54 chrX 54480093 54480143 -112170153 - ID_B1 SINE B4 -82 142 98 9 1000 3769 18 0 0 chrX 54480143 54480539 -112169757 + MTA_Mm LTR MaLR 1 396 0 9 1000 237 243 13 79 chrX 54480539 54480552 -112169744 - PB1D10 SINE Alu -101 16 4 9 1000 538 250 7 54 chrX 54480552 54480636 -112169660 - ID_B1 SINE B4 -127 97 2 9 1000 288 345 36 0 chrX 54481001 54481111 -112169185 + MIR SINE MIR 31 144 -118 9 1000 247 211 35 0 chrX 54481505 54481562 -112168734 + GA-rich Low_complexity Low_complexity 1 59 0 9 1000 334 254 90 83 chrX 54481585 54481718 -112168578 + B1F SINE Alu 15 148 -1 9 1000 909 284 14 0 chrX 54481822 54482040 -112168256 + ID_B1 SINE B4 3 223 -1 9 1000 636 143 0 0 chrX 54482783 54482909 -112167387 + (TC)n Simple_repeat Simple_repeat 1 126 0 9 1000 455 298 40 54 chrX 54483076 54483225 -112167071 - RSINE1 SINE B4 -17 148 2 9 1000 991 271 10 9 chrX 54483225 54483449 -112166847 - B4 SINE B4 -73 219 2 9 1000 645 242 8 15 chrX 54483871 54484005 -112166291 + B1_Mur1 SINE Alu 1 133 -16 9 1000 558 0 0 0 chrX 54484010 54484072 -112166224 + (TAGA)n Simple_repeat Simple_repeat 3 64 0 9 1000 1130 266 106 27 chrX 54484078 54484599 -112165697 + L1MA7 LINE L1 5730 6291 0 9 1000 182 118 0 29 chrX 54486539 54486574 -112163722 + (AGGGGG)n Simple_repeat Simple_repeat 5 38 0 9 1000 214 364 0 0 chrX 54486775 54486841 -112163455 + L2 LINE L2 1815 1880 -1539 9 1000 194 333 111 35 chrX 54487057 54487256 -112163040 + L2 LINE L2 2291 2504 -915 9 1000 402 262 83 18 chrX 54487665 54487774 -112162522 - PB1D10 SINE Alu -1 116 1 9 1000 355 236 138 138 chrX 54488423 54488528 -112161768 - L1MA9 LINE L1 -41 6271 6164 9 1000 378 0 0 0 chrX 54488528 54488570 -112161726 + (TG)n Simple_repeat Simple_repeat 1 42 0 9 1000 423 0 0 0 chrX 54488570 54488616 -112161680 + (GA)n Simple_repeat Simple_repeat 1 47 0 9 1000 355 236 138 138 chrX 54488616 54488686 -112161610 - L1MA9 LINE L1 -149 6163 6106 9 1000 1117 97 7 0 chrX 54488686 54488830 -112161466 + B1_Mus2 SINE Alu 1 145 -2 9 1000 355 236 138 138 chrX 54488830 54488986 -112161310 - L1MA9 LINE L1 -207 6105 5939 9 1000 28 0 0 0 chrX 54489153 54489181 -112161115 + AT_rich Low_complexity Low_complexity 1 28 0 9 1000 894 244 10 20 chrX 54489287 54489484 -112160812 - B3A SINE B2 -3 195 1 9 1000 290 262 50 0 chrX 54489745 54489825 -112160471 - MIR3 SINE MIR -41 167 84 9 1000 912 189 0 33 chrX 54489919 54490100 -112160196 + MTD LTR MaLR 237 411 -8 9 1000 342 80 0 0 chrX 54492938 54492988 -112157308 + (TTATA)n Simple_repeat Simple_repeat 5 54 0 9 1000 1041 243 20 0 chrX 54492988 54493190 -112157106 - ID_B1 SINE B4 -16 208 3 9 1000 423 0 0 0 chrX 54496422 54496469 -112153827 + (TA)n Simple_repeat Simple_repeat 2 48 0 9 1000 210 175 126 0 chrX 54497088 54497146 -112153150 - MIRc SINE MIR -180 88 14 9 1000 240 229 0 0 chrX 54498655 54498703 -112151593 - L4 LINE RTE 0 2029 1982 9 1000 530 310 81 36 chrX 54500028 54500249 -112150047 + B4A SINE B4 16 246 -46 1 1000 279 0 0 0 chrX 54500292 54500323 -112149973 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1000 22 56 0 0 chrX 54500357 54500393 -112149903 + AT_rich Low_complexity Low_complexity 1 36 0 3 1000 221 306 14 27 chrX 54500419 54500493 -112149803 - ID4_ SINE ID -9 74 2 4 1000 406 314 0 0 chrX 54500516 54500656 -112149640 - L1MA6 LINE L1 -22 6278 6139 5 1000 625 244 17 98 chrX 54500659 54500832 -112149464 + RSINE1 SINE B4 3 161 -4 6 1000 249 260 126 30 chrX 54501255 54501390 -112148906 + L2 LINE L2 1915 2062 -1357 7 1000 200 314 46 37 chrX 54501850 54501959 -112148337 + L2 LINE L2 2347 2456 -963 7 1000 342 0 0 0 chrX 54502766 54502804 -112147492 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 8 1000 448 240 70 0 chrX 54503349 54503478 -112146818 - B1F SINE Alu -10 139 2 9 1000 489 76 0 0 chrX 54504696 54504762 -112145534 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 1000 258 233 33 0 chrX 54504762 54504822 -112145474 + L1MD2 LINE L1 6061 6122 -237 1 1000 1002 99 7 0 chrX 54504828 54504970 -112145326 + B2_Mm2 SINE B2 1 143 -52 1 1000 496 260 81 138 chrX 54505041 54505251 -112145045 - B3A SINE B2 0 198 1 1 1000 180 77 0 0 chrX 54505261 54505287 -112145009 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 1 1000 812 85 0 8 chrX 54505289 54505408 -112144888 + (TTCC)n Simple_repeat Simple_repeat 4 121 0 1 1000 1134 42 27 14 chrX 54505445 54505591 -112144705 - B1_Mus1 SINE Alu 0 148 1 1 1000 480 35 0 0 chrX 54505975 54506033 -112144263 + (TCTCC)n Simple_repeat Simple_repeat 4 61 0 1 1000 47 33 0 0 chrX 54506153 54506214 -112144082 + AT_rich Low_complexity Low_complexity 1 61 0 1 1000 3058 66 34 10 chrX 54507099 54507513 -112142783 + L1_Mus1 LINE L1 6144 6567 0 1 1000 1317 162 18 0 chrX 54507900 54508122 -112142174 - URR1A DNA MER1_type 0 226 1 2 1000 7078 46 3 6 chrX 54508320 54509195 -112141101 + L1Md_F2 LINE L1 5708 6580 -2 2 1000 232 315 109 18 chrX 54510152 54510262 -112140034 + B1F1 SINE Alu 6 125 -24 2 1000 218 265 20 13 chrX 54510276 54510433 -112139863 + GA-rich Low_complexity Low_complexity 1 158 0 2 1000 555 238 203 24 chrX 54511204 54511387 -112138909 + B3A SINE B2 1 216 0 2 1000 196 285 1 18 chrX 54511486 54511547 -112138749 - MIRm SINE MIR -108 160 98 2 1000 700 203 182 22 chrX 54512318 54512499 -112137797 - B3 SINE B2 -5 211 2 2 1000 484 250 147 0 chrX 54512519 54512635 -112137661 - ID_B1 SINE B4 -10 214 82 2 1000 238 286 78 0 chrX 54512566 54512643 -112137653 - MT2B2 LTR ERVL -346 238 156 2 1000 415 286 121 45 chrX 54512846 54512978 -112137318 + RSINE1 SINE B4 2 143 -22 2 1000 297 89 0 0 chrX 54512983 54513028 -112137268 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1000 558 0 0 0 chrX 54513030 54513092 -112137204 + (GA)n Simple_repeat Simple_repeat 2 63 0 3 1000 258 252 100 64 chrX 54513349 54513459 -112136837 + YREP_Mm Unknown Unknown 181 294 -1518 3 1000 296 341 49 0 chrX 54513391 54513473 -112136823 - PB1D10 SINE Alu -27 90 5 3 1000 295 352 0 52 chrX 54513473 54513487 -112136809 - ID_B1 SINE B4 -53 171 81 3 1000 219 205 0 0 chrX 54514670 54514709 -112135587 + B3A SINE B2 1 39 -159 3 1000 8079 128 30 5 chrX 54514747 54515993 -112134303 + Lx4B LINE L1 5781 7058 0 3 1000 499 241 33 72 chrX 54516033 54516185 -112134111 + B3A SINE B2 1 146 -52 3 1000 405 378 23 6 chrX 54516490 54516663 -112133633 + L1MA6 LINE L1 330 505 -6829 3 1000 400 304 124 15 chrX 54516984 54517121 -112133175 + B4A SINE B4 133 284 -8 3 1000 290 348 30 65 chrX 54517490 54517659 -112132637 + MLT1F-int LTR MaLR 1012 1174 -315 4 1000 243 323 0 16 chrX 54517898 54517961 -112132335 + ID4_ SINE ID 20 81 -2 4 1000 25 31 0 0 chrX 54518037 54518069 -112132227 + AT_rich Low_complexity Low_complexity 1 32 0 4 1000 356 322 189 15 chrX 54518240 54518499 -112131797 + L1MA6 LINE L1 2798 3101 -3907 3 1000 288 330 124 0 chrX 54518528 54518625 -112131671 + PB1D10 SINE Alu 2 110 -7 4 1000 1166 262 145 22 chrX 54518627 54519260 -112131036 + L1MA6 LINE L1 3156 3866 -3137 3 1000 879 253 220 149 chrX 54519275 54519897 -112130399 + L1MA6 LINE L1 4167 4913 -2090 3 1000 227 224 17 0 chrX 54519897 54519955 -112130341 + Tigger6a DNA MER2_type 686 744 -339 4 1000 879 253 220 149 chrX 54519955 54520294 -112130002 + L1MA6 LINE L1 4914 5320 -1683 3 1000 376 333 91 8 chrX 54520294 54520415 -112129881 + RSINE1 SINE B4 1 131 -34 4 1000 879 253 220 149 chrX 54520415 54520907 -112129389 + L1MA6 LINE L1 5321 5914 -1089 3 1000 327 65 0 0 chrX 54520937 54520983 -112129313 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1000 250 317 356 0 chrX 54520999 54521103 -112129193 + RSINE1 SINE B4 21 161 -4 4 1000 1275 255 175 22 chrX 54521154 54521677 -112128619 + L1MA6 LINE L1 6057 6673 -487 3 1000 582 15 0 0 chrX 54521677 54521744 -112128552 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 4 1000 1275 258 183 29 chrX 54521744 54522079 -112128217 + L1MA6 LINE L1 6674 7059 -101 3 1000 294 50 0 0 chrX 54522102 54522142 -112128154 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1000 610 263 35 45 chrX 54522284 54522483 -112127813 - B3A SINE B2 -1 197 1 5 1000 228 171 0 0 chrX 54522555 54522596 -112127700 + L1_Mur3 LINE L1 5375 5415 -465 5 1000 230 246 0 0 chrX 54522619 54522684 -112127612 + L1_Rod LINE L1 5772 5836 -11 5 1000 596 192 5 2 chrX 54522905 54523020 -112127276 + B2_Mm2 SINE B2 5 121 -77 5 1000 261 281 0 30 chrX 54523020 54523119 -112127177 + Lx4A LINE L1 5700 5827 -473 5 1000 1079 291 46 30 chrX 54523149 54523517 -112126779 - MTE2a LTR MaLR -3 376 3 5 1000 404 263 61 27 chrX 54523714 54523951 -112126345 + L1MB8 LINE L1 5860 6108 -70 5 1000 278 328 78 31 chrX 54524122 54524251 -112126045 + MIR SINE MIR 35 169 -93 5 1000 303 93 0 0 chrX 54524415 54524458 -112125838 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1000 565 348 75 29 chrX 54524466 54524744 -112125552 - B4A SINE B4 0 292 2 5 1000 386 277 137 60 chrX 54525010 54525294 -112125002 + L1MA4 LINE L1 4916 5221 -922 6 1000 233 289 0 67 chrX 54525546 54525635 -112124661 + C-rich Low_complexity Low_complexity 1 83 0 6 1000 23 0 0 0 chrX 54525711 54525734 -112124562 + AT_rich Low_complexity Low_complexity 1 23 0 6 15 443 307 136 44 chrX 54525756 54526345 -112123951 + L1MA4 LINE L1 5297 5939 -361 6 1001 331 310 0 22 chrX 54526371 54526460 -112123836 + PB1D7 SINE Alu 34 120 0 6 1001 215 330 28 46 chrX 54526807 54526915 -112123381 + L2b LINE L2 3267 3372 -3 6 1001 402 21 0 0 chrX 54527303 54527350 -112122946 + (TATG)n Simple_repeat Simple_repeat 3 49 0 6 1001 633 204 0 0 chrX 54527412 54527515 -112122781 + B3 SINE B2 3 105 -111 6 1001 774 224 72 34 chrX 54527863 54528031 -112122265 + B3 SINE B2 1 166 -50 6 1001 288 0 0 0 chrX 54528031 54528063 -112122233 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1001 774 224 72 34 chrX 54528063 54528102 -112122194 + B3 SINE B2 167 216 0 6 1001 286 345 8 25 chrX 54528209 54528328 -112121968 + ID_B1 SINE B4 76 192 -32 6 1001 466 192 360 13 chrX 54528556 54528709 -112121587 + B3 SINE B2 5 210 -6 7 1001 494 282 0 75 chrX 54528868 54529002 -112121294 + ID_B1 SINE B4 94 217 -7 7 1001 255 61 0 0 chrX 54529157 54529190 -112121106 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 7 1001 210 326 36 43 chrX 54529938 54530076 -112120220 - MIR SINE MIR -116 146 10 7 1001 805 198 10 50 chrX 54530156 54530358 -112119938 + B3A SINE B2 1 194 -4 7 1001 416 220 198 25 chrX 54530561 54530682 -112119614 + ID_B1 SINE B4 79 220 -4 7 1001 238 309 83 9 chrX 54531255 54531363 -112118933 + MIRc SINE MIR 37 152 -116 7 1001 228 202 99 20 chrX 54531854 54531955 -112118341 - Lx9 LINE L1 -20 7624 7516 7 1001 410 315 16 32 chrX 54532324 54532570 -112117726 + L1MA4 LINE L1 5700 5941 -359 7 1001 366 123 0 0 chrX 54532572 54532629 -112117667 + (TG)n Simple_repeat Simple_repeat 1 57 0 7 1001 339 25 0 0 chrX 54532629 54532668 -112117628 + (GA)n Simple_repeat Simple_repeat 1 40 0 8 1001 388 271 227 7 chrX 54532804 54533091 -112117205 + L1MA4 LINE L1 5939 6288 -12 7 1001 445 252 20 0 chrX 54534116 54534215 -112116081 - B1F SINE Alu 0 149 49 8 1001 293 234 92 15 chrX 54534213 54534278 -112116018 + ID4 SINE ID 5 74 -9 8 1001 372 304 115 66 chrX 54534299 54534413 -112115883 + MER2 DNA MER2_type 152 276 -69 8 1001 1004 111 51 39 chrX 54534413 54534591 -112115705 + B2_Mm2 SINE B2 2 181 -14 8 1001 372 304 115 66 chrX 54534591 54534659 -112115637 + MER2 DNA MER2_type 277 343 -2 8 1001 366 298 67 22 chrX 54534921 54535044 -112115252 - MER20 DNA MER1_type -27 192 63 8 1001 681 85 0 25 chrX 54535044 54535165 -112115131 + L1Md_F2 LINE L1 6465 6582 0 8 1001 366 326 160 1300 chrX 54535165 54535206 -112115090 - MER20 DNA MER1_type -721 62 1 8 1001 398 222 8 0 chrX 54535373 54535499 -112114797 + GA-rich Low_complexity Low_complexity 1 127 0 8 1001 3054 75 12 17 chrX 54535682 54536104 -112114192 + L1_Mus1 LINE L1 6148 6567 0 8 1001 900 265 18 18 chrX 54536155 54536378 -112113918 + ID_B1 SINE B4 2 224 0 8 1001 746 291 11 72 chrX 54536746 54537024 -112113272 - MTEa LTR MaLR -118 261 1 9 1001 276 100 0 0 chrX 54537037 54537077 -112113219 + (GGA)n Simple_repeat Simple_repeat 3 42 0 9 1001 702 267 151 20 chrX 54537084 54537329 -112112967 + B4A SINE B4 12 288 -4 9 1001 308 24 24 0 chrX 54537359 54537400 -112112896 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 1001 395 173 90 8 chrX 54537411 54537545 -112112751 + L1MCa LINE L1 2139 2283 -4225 9 1001 736 201 64 19 chrX 54537546 54537703 -112112593 + RSINE1 SINE B4 2 165 0 9 1001 21 0 0 0 chrX 54537718 54537739 -112112557 + AT_rich Low_complexity Low_complexity 1 21 0 9 1001 1213 55 0 0 chrX 54537833 54537979 -112112317 - B1_Mus1 SINE Alu -2 146 1 9 1001 994 90 0 0 chrX 54537979 54538113 -112112183 - B2_Mm2 SINE B2 -61 134 1 9 1001 277 234 118 78 chrX 54538172 54538274 -112112022 + PB1D9 SINE Alu 5 110 -10 9 1001 1442 51 0 11 chrX 54538282 54538462 -112111834 + B2_Mm2 SINE B2 4 181 -14 1 1001 203 220 0 33 chrX 54538518 54538579 -112111717 + (CATA)n Simple_repeat Simple_repeat 4 62 0 1 1001 561 193 31 88 chrX 54538580 54538773 -112111523 + L1M2 LINE L1 5177 5358 -785 1 1001 263 246 33 0 chrX 54538790 54538851 -112111445 + (TATG)n Simple_repeat Simple_repeat 4 66 0 1 1001 22 56 0 0 chrX 54538891 54538927 -112111369 + AT_rich Low_complexity Low_complexity 1 36 0 1 1001 261 249 180 41 chrX 54538942 54539041 -112111255 + L1M2 LINE L1 5381 5490 -801 1 1001 350 202 0 37 chrX 54539041 54539123 -112111173 + ID4 SINE ID 2 80 -3 1 1001 261 249 180 41 chrX 54539123 54539195 -112111101 + L1M2 LINE L1 5491 5576 -715 1 1001 295 289 28 124 chrX 54539345 54539523 -112110773 + RSINE1 SINE B4 5 165 0 1 1001 261 0 0 0 chrX 54539540 54539569 -112110727 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1001 399 311 37 0 chrX 54540371 54540506 -112109790 + B1F SINE Alu 3 142 -7 1 1001 832 129 14 0 chrX 54540509 54540656 -112109640 + (TAGA)n Simple_repeat Simple_repeat 2 150 0 1 1001 540 286 8 0 chrX 54540666 54540792 -112109504 + ID_B1 SINE B4 98 224 0 1 1001 644 207 0 0 chrX 54543075 54543191 -112107105 - PB1D10 SINE Alu -1 116 1 1 1001 21 0 0 0 chrX 54543411 54543432 -112106864 + AT_rich Low_complexity Low_complexity 1 21 0 1 1001 1467 69 0 0 chrX 54543443 54543632 -112106664 + L1_Mus2 LINE L1 6376 6564 -2 1 1001 223 360 46 29 chrX 54543829 54544006 -112106290 - MIRb SINE MIR -70 198 12 1 1001 207 0 0 0 chrX 54544161 54544184 -112106112 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 1 1001 671 249 40 23 chrX 54544391 54544564 -112105732 + B3A SINE B2 5 180 -18 1 1001 284 331 0 47 chrX 54544787 54544936 -112105360 + GA-rich Low_complexity Low_complexity 2 143 0 1 1001 421 289 0 0 chrX 54545077 54545174 -112105122 + B1F SINE Alu 12 108 -41 1 1001 258 301 112 26 chrX 54545083 54545199 -112105097 + ID_B1 SINE B4 99 224 0 1 1001 244 80 80 0 chrX 54545203 54545253 -112105043 + A-rich Low_complexity Low_complexity 2 55 0 1 1001 352 310 35 0 chrX 54545276 54545363 -112104933 + 5S rRNA rRNA 1 90 -31 1 1001 265 299 0 29 chrX 54545304 54545373 -112104923 + AmnSINE1 SINE SINE 29 95 -480 1 1001 494 217 123 0 chrX 54545775 54545881 -112104415 + RSINE1 SINE B4 1 119 -46 1 1001 342 0 0 0 chrX 54545893 54545931 -112104365 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1001 27 0 0 0 chrX 54545967 54545994 -112104302 + AT_rich Low_complexity Low_complexity 1 27 0 1 1001 951 135 0 20 chrX 54546002 54546153 -112104143 + B1_Mur4 SINE Alu 1 148 -2 1 1001 825 258 33 19 chrX 54546246 54546459 -112103837 - ID_B1 SINE B4 -8 216 1 1 1001 366 296 19 0 chrX 54547213 54547321 -112102975 - PB1D10 SINE Alu -7 110 1 1 1001 684 321 23 0 chrX 54547768 54547986 -112102310 + ID_B1 SINE B4 1 223 -1 1 1001 304 250 0 2 chrX 54548013 54548107 -112102189 + L1MA4 LINE L1 5844 5936 -364 1 1001 2206 111 66 58 chrX 54548172 54548553 -112101743 + ORR1C2 LTR MaLR 1 384 0 1 1001 497 250 9 18 chrX 54549411 54549525 -112100771 - PB1D7 SINE Alu -5 115 3 1 1001 268 327 71 37 chrX 54549546 54549870 -112100426 - L2a LINE L2 -71 3355 3021 1 1001 192 380 32 11 chrX 54549981 54550074 -112100222 - L2a LINE L2 -623 2796 2702 1 1001 1298 75 29 0 chrX 54550125 54550298 -112099998 - B2_Mm2 SINE B2 -14 181 4 1 1001 334 187 72 62 chrX 54550336 54550433 -112099863 - B1_Mm SINE Alu 0 147 50 1 1001 335 293 27 67 chrX 54551224 54551374 -112098922 - RSINE1 SINE B4 0 165 22 1 1001 22 0 0 0 chrX 54551402 54551424 -112098872 + AT_rich Low_complexity Low_complexity 1 22 0 1 1001 532 292 27 13 chrX 54551424 54551573 -112098723 - RSINE1 SINE B4 -2 163 13 1 1001 27 0 0 0 chrX 54551585 54551612 -112098684 + AT_rich Low_complexity Low_complexity 1 27 0 1 1001 32 0 0 0 chrX 54551679 54551711 -112098585 + AT_rich Low_complexity Low_complexity 1 32 0 1 1001 521 315 0 0 chrX 54551804 54551931 -112098365 - ID_B1 SINE B4 -5 219 93 1 1001 441 345 42 0 chrX 54551931 54551942 -112098354 - B1_Mur1 SINE Alu -1 144 1 1 1001 762 11 0 0 chrX 54551973 54552060 -112098236 + (TTC)n Simple_repeat Simple_repeat 2 88 0 1 1001 877 239 18 0 chrX 54552931 54553098 -112097198 + B3 SINE B2 16 185 -31 1 1001 440 217 60 74 chrX 54553172 54553321 -112096975 - B1F SINE Alu -2 147 1 1 1001 591 112 0 0 chrX 54553440 54553529 -112096767 + (GGAA)n Simple_repeat Simple_repeat 1 89 0 1 1001 21 57 0 0 chrX 54553600 54553635 -112096661 + AT_rich Low_complexity Low_complexity 1 35 0 1 1001 379 344 15 15 chrX 54553905 54554038 -112096258 + ID_B1 SINE B4 84 216 -8 1 1001 920 244 15 26 chrX 54554222 54554458 -112095838 + ID_B1 SINE B4 1 233 -59 1 1001 21 0 0 0 chrX 54554466 54554487 -112095809 + AT_rich Low_complexity Low_complexity 1 21 0 1 1001 1464 142 0 18 chrX 54554605 54554834 -112095462 + URR1B DNA MER1_type 1 225 0 1 1001 516 244 0 57 chrX 54554907 54555029 -112095267 - PB1D10 SINE Alu -2 115 1 1 1001 227 268 37 93 chrX 54554943 54555050 -112095246 - MT2B2 LTR ERVL -340 244 144 1 1001 432 0 0 0 chrX 54555064 54555112 -112095184 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1001 35 0 0 0 chrX 54557615 54557650 -112092646 + AT_rich Low_complexity Low_complexity 1 35 0 1 1001 586 241 58 0 chrX 54558523 54558660 -112091636 + B1F SINE Alu 2 146 -3 1 1001 432 51 0 0 chrX 54558744 54558803 -112091493 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1001 527 214 8 25 chrX 54558804 54558924 -112091372 - RSINE1 SINE B4 -46 119 2 1 1001 330 287 53 0 chrX 54559062 54559156 -112091140 + B1F2 SINE Alu 1 99 -50 1 1001 354 298 15 76 chrX 54559151 54559282 -112091014 + RSINE1 SINE B4 43 165 0 1 1001 275 275 46 86 chrX 54559599 54559774 -112090522 - Lx8 LINE L1 -6 7467 7300 1 1001 1044 240 9 0 chrX 54560328 54560545 -112089751 - ID_B1 SINE B4 -5 219 1 1 1001 319 197 254 41 chrX 54560864 54560986 -112089310 - B1F SINE Alu 0 149 2 1 1001 317 277 0 24 chrX 54561854 54561939 -112088357 - ID SINE ID -140 84 2 1 1001 330 317 34 7 chrX 54562026 54562172 -112088124 + MLT1A0 LTR MaLR 2 151 -214 1 1001 767 228 86 20 chrX 54562179 54562376 -112087920 + B3 SINE B2 1 210 -6 1 1001 567 305 51 23 chrX 54562703 54562918 -112087378 + ID_B1 SINE B4 1 221 -3 1 1001 213 326 11 63 chrX 54564156 54564251 -112086045 + MIR SINE MIR 34 123 -85 1 1001 395 288 19 5 chrX 54564500 54564643 -112085653 + B1F SINE Alu 1 141 -8 1 1001 232 213 0 0 chrX 54564651 54564698 -112085598 + ID4_ SINE ID 2 48 -35 1 1001 359 286 42 21 chrX 54565557 54565700 -112084596 - MamRep1161 DNA TcMar -792 165 20 1 1001 454 271 57 8 chrX 54565784 54565907 -112084389 - RSINE1 SINE B4 -25 140 12 1 1001 196 362 11 11 chrX 54566607 54566702 -112083594 + L2a LINE L2 3318 3412 -14 1 1001 403 218 13 13 chrX 54566795 54566874 -112083422 + ID4_ SINE ID 2 80 -3 1 1001 988 220 23 9 chrX 54567418 54567634 -112082662 - ID_B1 SINE B4 0 224 6 1 1001 192 179 0 0 chrX 54567749 54567788 -112082508 + (TTAA)n Simple_repeat Simple_repeat 3 41 0 1 1001 403 244 37 52 chrX 54567966 54568100 -112082196 + B1F SINE Alu 1 132 -17 1 1001 795 273 9 9 chrX 54568103 54568314 -112081982 + B3 SINE B2 2 212 -4 1 1001 709 272 48 19 chrX 54568756 54568962 -112081334 + B3 SINE B2 1 212 -4 1 1001 739 261 75 0 chrX 54569242 54569437 -112080859 + B4A SINE B4 21 230 -62 1 1001 400 246 305 6 chrX 54569437 54569594 -112080702 + B3A SINE B2 2 205 -11 1 1001 230 136 0 205 chrX 54569594 54569677 -112080619 - Lx9 LINE L1 -185 7459 7394 1 1001 294 303 13 0 chrX 54569681 54569757 -112080539 + B4A SINE B4 214 290 -2 1 1001 513 47 0 0 chrX 54569767 54569831 -112080465 + (CATA)n Simple_repeat Simple_repeat 1 64 0 1 1001 489 233 29 0 chrX 54569902 54570005 -112080291 - PB1D10 SINE Alu -5 112 7 1 1001 1188 62 7 0 chrX 54570056 54570201 -112080095 - B1_Mus1 SINE Alu -1 147 2 1 1001 207 0 0 0 chrX 54570299 54570322 -112079974 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 1001 1220 55 0 0 chrX 54570335 54570481 -112079815 - B1_Mus1 SINE Alu 0 148 3 1 1001 1107 250 27 30 chrX 54570487 54570784 -112079512 + Lx9 LINE L1 7181 7476 -168 1 1001 657 66 0 0 chrX 54570784 54570875 -112079421 + (TG)n Simple_repeat Simple_repeat 1 91 0 1 1001 275 237 57 43 chrX 54570875 54570998 -112079298 + Lx9 LINE L1 7514 7642 -2 1 1001 27 0 0 0 chrX 54571045 54571072 -112079224 + AT_rich Low_complexity Low_complexity 1 27 0 1 1001 978 236 10 15 chrX 54571072 54571278 -112079018 - B3 SINE B2 -9 207 3 1 1001 372 289 139 8 chrX 54571286 54571415 -112078881 - B1F SINE Alu -3 146 1 1 1001 583 210 0 95 chrX 54571985 54572143 -112078153 + ID_B1 SINE B4 81 223 -1 1 1001 406 253 49 49 chrX 54572288 54572450 -112077846 + RSINE1 SINE B4 4 165 0 1 1001 295 286 33 0 chrX 54572527 54572618 -112077678 + PB1D9 SINE Alu 26 119 -1 1 1001 457 293 1 15 chrX 54572619 54572766 -112077530 + B1F1 SINE Alu 1 147 -2 1 1001 354 226 0 0 chrX 54573712 54573774 -112076522 + B1_Mus2 SINE Alu 2 63 -84 1 1001 186 43 0 0 chrX 54573774 54573797 -112076499 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1 1001 1111 112 6 0 chrX 54573798 54573967 -112076329 - B2_Mm1a SINE B2 -15 178 9 1 1001 492 32 0 0 chrX 54574053 54574115 -112076181 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1001 896 264 14 0 chrX 54574911 54575131 -112075165 + ID_B1 SINE B4 2 224 0 2 1001 185 133 67 0 chrX 54575144 54575189 -112075107 + GA-rich Low_complexity Low_complexity 4 51 0 2 1001 188 235 0 38 chrX 54575213 54575266 -112075030 - MIRb SINE MIR -10 258 208 2 1001 408 20 0 0 chrX 54575407 54575456 -112074840 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1001 235 349 0 0 chrX 54575922 54575988 -112074308 + RSINE1 SINE B4 98 163 -2 2 1001 473 214 45 0 chrX 54576105 54576217 -112074079 - B1F SINE Alu -26 123 7 2 1001 212 255 0 0 chrX 54576294 54576345 -112073951 + MER5B DNA MER1_type 2 52 -126 2 1001 652 333 63 70 chrX 54576369 54576941 -112073355 + L1ME3A LINE L1 5566 6133 -40 2 1001 249 355 41 8 chrX 54576977 54577099 -112073197 + MER5B DNA MER1_type 50 175 -3 2 1001 468 291 14 14 chrX 54577229 54577372 -112072924 + MIRb SINE MIR 115 257 -11 2 1001 206 233 0 16 chrX 54577973 54578034 -112072262 + GA-rich Low_complexity Low_complexity 5 64 0 2 1001 216 86 0 0 chrX 54579589 54579624 -112070672 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2 1001 300 53 0 0 chrX 54579899 54579937 -112070359 + (CAG)n Simple_repeat Simple_repeat 2 39 0 2 1001 344 235 37 14 chrX 54580357 54580458 -112069838 - PB1D10 SINE Alu -8 109 4 2 1001 668 195 0 15 chrX 54580666 54580796 -112069500 + B1_Mur1 SINE Alu 1 128 -21 2 1001 201 178 0 0 chrX 54581138 54581183 -112069113 + GA-rich Low_complexity Low_complexity 3 47 0 2 1001 351 0 0 0 chrX 54581503 54581542 -112068754 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1001 568 268 105 63 chrX 54581614 54581948 -112068348 + L1M5 LINE L1 5347 5694 -430 2 1001 313 266 89 0 chrX 54581948 54582072 -112068224 + L1M4 LINE L1 3783 3917 -2229 2 1001 547 305 77 100 chrX 54582087 54582386 -112067910 + B4 SINE B4 1 292 0 2 1001 755 280 109 12 chrX 54582450 54582479 -112067817 + L1M4 LINE L1 3918 3950 -2196 2 1001 180 77 0 0 chrX 54582479 54582505 -112067791 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 1001 755 280 109 12 chrX 54582505 54582898 -112067398 + L1M4 LINE L1 3951 4380 -1766 2 1001 882 114 0 0 chrX 54582907 54583038 -112067258 + B1_Mur4 SINE Alu 9 139 -11 2 1001 989 134 0 12 chrX 54583038 54583211 -112067085 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 2 1001 307 290 9 53 chrX 54583291 54583404 -112066892 + ID_B1 SINE B4 106 213 -11 2 1001 541 285 32 61 chrX 54583410 54583614 -112066682 + L1M4 LINE L1 4397 4597 -1549 2 1001 385 118 13 13 chrX 54583614 54583691 -112066605 - L1Md_F2 LINE L1 -1 6581 6505 2 1001 1330 72 16 16 chrX 54583699 54583882 -112066414 - B2_Mm2 SINE B2 -9 186 4 2 1001 541 285 32 61 chrX 54583882 54583908 -112066388 + L1M4 LINE L1 4606 4630 -1516 2 1001 550 243 20 40 chrX 54583908 54584047 -112066249 + B1_Mm SINE Alu 1 140 -7 2 1001 246 62 0 0 chrX 54584047 54584079 -112066217 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1001 374 0 0 21 chrX 54584079 54584125 -112066171 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 1001 541 285 32 61 chrX 54584134 54584270 -112066026 + L1M4 LINE L1 4631 4762 -1384 2 1001 229 175 0 0 chrX 54584347 54584383 -112065913 + RSINE1 SINE B4 2 37 -128 2 1001 477 198 5 9 chrX 54584383 54584477 -112065819 + RSINE1 SINE B4 4 97 -68 2 1001 1166 70 0 0 chrX 54584696 54584839 -112065457 + B1_Mus1 SINE Alu 1 143 -5 2 1001 376 19 19 19 chrX 54584845 54584899 -112065397 + (TAAAA)n Simple_repeat Simple_repeat 2 55 0 2 1001 1481 69 5 0 chrX 54584903 54585092 -112065204 + B2_Mm1a SINE B2 1 190 -3 2 1001 229 255 0 18 chrX 54585102 54585158 -112065138 + B4A SINE B4 2 56 -236 2 1001 771 239 29 33 chrX 54585124 54585334 -112064962 + B3 SINE B2 7 208 -8 2 1001 227 320 76 97 chrX 54585346 54585574 -112064722 + B4 SINE B4 79 290 -2 2 1001 219 69 0 0 chrX 54585574 54585603 -112064693 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1001 1421 62 17 0 chrX 54585677 54585855 -112064441 + B2_Mm2 SINE B2 1 181 -14 2 1001 267 237 0 0 chrX 54586192 54586306 -112063990 + CT-rich Low_complexity Low_complexity 1 114 0 2 1001 216 0 0 0 chrX 54586477 54586501 -112063795 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1001 1067 197 26 0 chrX 54586683 54586876 -112063420 + B3 SINE B2 2 199 -17 2 1001 460 254 90 0 chrX 54587022 54587144 -112063152 + B4A SINE B4 3 135 -157 2 1001 315 0 0 0 chrX 54587193 54587228 -112063068 + (GGAA)n Simple_repeat Simple_repeat 1 35 0 2 1001 706 234 0 0 chrX 54587971 54588112 -112062184 - B1_Mur1 SINE Alu -8 141 1 2 1001 195 42 0 0 chrX 54588170 54588194 -112062102 + (CTG)n Simple_repeat Simple_repeat 3 26 0 2 1001 402 21 0 0 chrX 54588194 54588241 -112062055 + (TGG)n Simple_repeat Simple_repeat 1 47 0 2 1001 366 267 37 172 chrX 54588264 54588508 -112061788 - MIR SINE MIR -30 232 22 2 1001 227 212 29 57 chrX 54588891 54588961 -112061335 - ID4_ SINE ID -3 80 13 2 1001 324 259 0 0 chrX 54589090 54589171 -112061125 - Lx9 LINE L1 -27 7617 7537 2 1001 864 102 150 0 chrX 54589172 54589319 -112060977 + B2_Mm1t SINE B2 3 171 -22 2 1001 445 94 318 9 chrX 54589355 54589462 -112060834 + B2_Mm2 SINE B2 47 186 -9 2 1001 630 160 130 0 chrX 54589462 54589593 -112060703 - Lx9 LINE L1 -98 7546 7399 2 1001 460 338 0 14 chrX 54589784 54589925 -112060371 - ID_B1 SINE B4 -3 221 83 2 1001 324 83 0 0 chrX 54590537 54590585 -112059711 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1001 754 264 6 0 chrX 54593029 54593196 -112057100 - ID_B1 SINE B4 -55 169 2 2 1001 606 265 7 0 chrX 54593246 54593397 -112056899 + URR1A DNA MER1_type 8 159 -67 2 1001 1790 217 58 82 chrX 54593412 54593709 -112056587 + Lx7 LINE L1 7158 7423 -273 2 1001 645 14 0 0 chrX 54593709 54593783 -112056513 + (TG)n Simple_repeat Simple_repeat 2 75 0 2 1001 1790 217 58 82 chrX 54593783 54594036 -112056260 + Lx7 LINE L1 7424 7695 -1 2 1001 259 237 12 50 chrX 54594101 54594181 -112056115 - L1MD1 LINE L1 -263 5979 5903 2 1001 298 254 0 0 chrX 54595034 54595105 -112055191 - PB1D7 SINE Alu 0 120 50 2 1001 210 71 0 0 chrX 54595557 54595585 -112054711 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 1001 470 309 28 35 chrX 54595614 54595758 -112054538 + ID_B1 SINE B4 82 224 0 2 1001 256 261 14 14 chrX 54596290 54596360 -112053936 + LTR41 LTR ERVL 65 134 -634 2 1001 325 236 190 140 chrX 54596494 54596815 -112053481 + LTR41 LTR ERVL 344 680 -88 2 1001 249 208 0 0 chrX 54596887 54596940 -112053356 - LTR41 LTR ERVL -13 755 703 2 1001 729 181 87 0 chrX 54596948 54597075 -112053221 + B1_Mur2 SINE Alu 4 141 -8 2 1001 477 50 0 0 chrX 54597078 54597138 -112053158 + (GAAA)n Simple_repeat Simple_repeat 3 62 0 2 1001 468 0 0 0 chrX 54597138 54597190 -112053106 + (GGGAA)n Simple_repeat Simple_repeat 2 53 0 2 1001 217 220 50 17 chrX 54597219 54597279 -112053017 + B4A SINE B4 1 62 -230 2 1001 268 182 55 0 chrX 54597323 54597378 -112052918 - ID_B1 SINE B4 0 224 167 2 1001 254 185 295 32 chrX 54597378 54597418 -112052878 - PB1D9 SINE Alu 0 120 1 2 1001 578 299 12 23 chrX 54597491 54597662 -112052634 - B4A SINE B4 -18 274 106 2 1001 401 279 104 72 chrX 54597662 54597855 -112052441 - MTD LTR MaLR 0 419 221 2 1001 339 362 0 16 chrX 54598204 54598333 -112051963 + B1F1 SINE Alu 3 129 -20 2 1001 342 271 47 113 chrX 54598362 54598512 -112051784 + B1F SINE Alu 1 140 -9 2 1001 258 278 14 14 chrX 54598767 54598840 -112051456 + B1F SINE Alu 67 139 -10 2 1001 939 261 88 25 chrX 54598853 54599261 -112051035 + L1MD2 LINE L1 5306 5739 -620 2 1001 543 229 45 22 chrX 54599276 54599410 -112050886 - B1_Mus2 SINE Alu -5 142 6 2 1001 296 298 100 11 chrX 54599416 54599596 -112050700 + L1MD2 LINE L1 5739 5934 -425 2 1001 489 252 0 9 chrX 54599598 54599710 -112050586 - ID_B1 SINE B4 -7 217 107 2 1001 374 348 34 0 chrX 54599796 54599914 -112050382 + B3A SINE B2 1 122 -76 2 1001 378 100 0 0 chrX 54599935 54599995 -112050301 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 1001 1042 280 114 40 chrX 54600020 54600466 -112049830 + Lx8 LINE L1 6961 7439 -34 2 1001 1419 239 41 36 chrX 54600474 54600891 -112049405 - MTD LTR MaLR 0 419 1 2 1001 21 0 0 0 chrX 54600919 54600940 -112049356 + AT_rich Low_complexity Low_complexity 1 21 0 2 1001 2174 199 31 40 chrX 54601107 54601270 -112049026 - Lx9 LINE L1 -711 6933 6781 2 1001 1590 39 0 0 chrX 54601270 54601450 -112048846 + B2_Mm1a SINE B2 1 180 -13 2 1001 684 0 0 0 chrX 54601450 54601526 -112048770 + (GAAA)n Simple_repeat Simple_repeat 2 77 0 2 1001 2174 199 31 40 chrX 54601526 54601785 -112048511 - Lx9 LINE L1 -864 6780 6515 2 1001 2555 179 97 18 chrX 54601784 54602302 -112047994 + Lx9 LINE L1 6945 7508 -136 2 1001 270 0 0 0 chrX 54602302 54602332 -112047964 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1001 2555 179 97 18 chrX 54602332 54602370 -112047926 + Lx9 LINE L1 7509 7545 -99 2 1001 1346 124 12 44 chrX 54602370 54602622 -112047674 + Lx2A1 LINE L1 6762 7005 -3 2 1001 502 100 139 10 chrX 54602629 54602730 -112047566 + Lx9 LINE L1 7530 7643 -1 2 1001 547 314 21 55 chrX 54602744 54602980 -112047316 - MT2A LTR ERVL -69 464 237 2 1001 466 286 75 33 chrX 54602984 54603197 -112047099 - MT2A LTR ERVL -234 299 78 2 1001 313 262 24 166 chrX 54603131 54603300 -112046996 - MTE2a LTR MaLR -232 147 3 2 1001 1310 85 11 6 chrX 54603322 54603500 -112046796 + B2_Mm1t SINE B2 1 179 -14 2 1001 359 123 163 18 chrX 54603543 54603657 -112046639 + B2_Mm2 SINE B2 47 193 0 2 1001 436 159 171 0 chrX 54604104 54604192 -112046104 + B1_Mur1 SINE Alu 40 142 -7 2 1001 369 0 0 0 chrX 54604243 54604284 -112046012 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1001 387 0 0 0 chrX 54604284 54604326 -112045970 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1001 495 290 8 0 chrX 54604339 54604470 -112045826 - B3A SINE B2 -65 133 2 2 1001 664 257 0 0 chrX 54604507 54604647 -112045649 + B1F SINE Alu 1 140 -9 2 1001 250 224 0 0 chrX 54605084 54605142 -112045154 - B1F SINE Alu -1 148 91 2 1001 385 281 61 9 chrX 54605162 54605277 -112045019 + B1F1 SINE Alu 22 142 -7 2 1001 204 125 0 0 chrX 54605327 54605359 -112044937 + (TA)n Simple_repeat Simple_repeat 1 32 0 2 1001 219 220 0 0 chrX 54605419 54605469 -112044827 + (TATG)n Simple_repeat Simple_repeat 3 52 0 3 1001 632 229 35 7 chrX 54605720 54605861 -112044435 - RSINE1 SINE B4 -4 161 17 3 1001 254 235 148 0 chrX 54605900 54605981 -112044315 - B1F SINE Alu -56 93 1 2 1001 470 317 48 0 chrX 54606789 54606934 -112043362 - MLT1A0 LTR MaLR -44 321 170 3 1001 243 0 0 0 chrX 54606939 54606966 -112043330 + (TC)n Simple_repeat Simple_repeat 2 28 0 3 1001 3010 184 40 55 chrX 54607055 54607687 -112042609 + RMER1C Other Other 719 1340 -2 3 1001 411 237 106 8 chrX 54607752 54607884 -112042412 - B1F2 SINE Alu -1 148 4 3 1001 243 314 134 32 chrX 54607923 54608140 -112042156 + L2a LINE L2 1404 1642 -1777 3 1001 330 304 25 50 chrX 54608202 54608323 -112041973 - MLT1B LTR MaLR 0 390 273 3 1001 257 243 105 26 chrX 54608327 54608403 -112041893 + Lx8 LINE L1 7152 7233 -240 3 1001 269 368 0 0 chrX 54608404 54608499 -112041797 + RMER15 LTR ERVL 372 466 -109 3 1001 1202 100 0 6 chrX 54608499 54608680 -112041616 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1001 276 30 0 0 chrX 54608680 54608713 -112041583 + (GGAA)n Simple_repeat Simple_repeat 1 33 0 3 1001 573 301 80 15 chrX 54608728 54608927 -112041369 + ID_B1 SINE B4 5 216 -8 3 1001 461 202 22 52 chrX 54608934 54609070 -112041226 - MLT1B LTR MaLR -172 218 87 3 1001 395 302 8 17 chrX 54609078 54609196 -112041100 + PB1D9 SINE Alu 4 120 0 3 1001 578 254 0 0 chrX 54609331 54609453 -112040843 - B1F SINE Alu -14 135 14 3 1001 845 174 7 26 chrX 54609912 54610065 -112040231 - B1_Mur4 SINE Alu 0 150 1 3 1001 300 284 68 0 chrX 54610759 54610833 -112039463 + ID SINE ID 4 82 -142 3 1001 21 0 0 0 chrX 54610841 54610862 -112039434 + AT_rich Low_complexity Low_complexity 1 21 0 3 1001 454 264 262 4 chrX 54610921 54611180 -112039116 + L2a LINE L2 2097 2422 -997 3 1001 681 240 85 48 chrX 54611553 54611570 -112038726 - B3A SINE B2 -3 195 182 3 1001 306 0 0 0 chrX 54611570 54611604 -112038692 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1001 681 240 85 48 chrX 54611604 54611774 -112038522 - B3A SINE B2 -17 181 1 3 1001 502 269 20 0 chrX 54611810 54611959 -112038337 - ID_B1 SINE B4 -71 153 2 3 1001 223 300 87 43 chrX 54611989 54612022 -112038274 + PB1D7 SINE Alu 1 90 -30 3 1001 301 194 192 14 chrX 54612022 54612095 -112038201 + ID_B1 SINE B4 132 217 -7 3 1001 185 366 127 23 chrX 54612126 54612347 -112037949 + L2a LINE L2 2836 3079 -340 3 1001 237 33 0 0 chrX 54612465 54612495 -112037801 + (CAA)n Simple_repeat Simple_repeat 2 31 0 3 1001 265 232 121 12 chrX 54612520 54612603 -112037693 - Lx8 LINE L1 -311 7162 7071 3 1001 534 234 199 9 chrX 54612623 54612839 -112037457 + Lx8 LINE L1 7212 7468 -5 3 1001 535 325 60 5 chrX 54612869 54613070 -112037226 + ID_B1 SINE B4 5 216 -8 3 1001 258 323 47 31 chrX 54613213 54613341 -112036955 + L2a LINE L2 3297 3426 0 3 1001 406 268 0 51 chrX 54613375 54613493 -112036803 + PB1D10 SINE Alu 6 117 0 3 1001 241 177 31 46 chrX 54613539 54613604 -112036692 + L1M4b LINE L1 2153 2216 -5118 3 1001 2169 183 71 26 chrX 54613666 54614416 -112035880 + RMER6A LTR ERVK 1 756 0 3 1001 193 109 21 21 chrX 54614416 54614463 -112035833 + (TATAA)n Simple_repeat Simple_repeat 1 47 0 3 1001 22 0 0 0 chrX 54614530 54614552 -112035744 + AT_rich Low_complexity Low_complexity 1 22 0 3 1001 428 276 39 65 chrX 54614684 54614839 -112035457 - B3A SINE B2 0 198 48 3 1001 909 253 0 15 chrX 54614851 54615052 -112035244 - B3 SINE B2 -4 212 15 3 1001 896 148 28 0 chrX 54615065 54615207 -112035089 - B1_Mur1 SINE Alu 0 149 4 3 1001 237 250 42 0 chrX 54615232 54615304 -112034992 - ID4_ SINE ID -7 76 2 3 1001 506 67 13 0 chrX 54615362 54615437 -112034859 + (TC)n Simple_repeat Simple_repeat 1 76 0 3 1001 1161 81 127 0 chrX 54615448 54615621 -112034675 - B2_Mm2 SINE B2 0 195 1 3 1001 286 264 22 33 chrX 54615622 54615712 -112034584 + ID_B1 SINE B4 102 190 -34 3 1001 291 356 8 25 chrX 54616645 54616766 -112033530 + B3 SINE B2 69 187 -29 3 1001 922 153 0 0 chrX 54616773 54616910 -112033386 + B1_Mur4 SINE Alu 1 137 -13 3 1001 680 35 0 11 chrX 54616912 54617000 -112033296 + (GGAA)n Simple_repeat Simple_repeat 4 90 0 3 1001 1115 90 0 0 chrX 54617042 54617186 -112033110 + B1_Mus1 SINE Alu 2 145 -3 3 1001 190 0 32 32 chrX 54617186 54617217 -112033079 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 3 1001 213 313 90 0 chrX 54617329 54617396 -112032900 + RSINE1 SINE B4 74 146 -19 3 1001 330 87 0 0 chrX 54617401 54617447 -112032849 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1001 231 114 0 0 chrX 54617447 54617491 -112032805 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 1001 294 245 36 30 chrX 54617525 54617625 -112032671 + PB1D10 SINE Alu 3 110 -7 3 1001 261 265 102 42 chrX 54617627 54617832 -112032464 - L1MB8 LINE L1 -121 6058 5841 3 1001 404 193 97 44 chrX 54617877 54617991 -112032305 + MurSatRep1 Unknown Unknown 145 264 -1873 3 1001 371 246 93 39 chrX 54618009 54618234 -112032062 - L1MB8 LINE L1 -429 5813 5576 3 1001 1726 291 72 21 chrX 54618223 54618887 -112031409 + Lx8 LINE L1 6776 7473 0 3 1001 358 247 13 0 chrX 54619088 54619165 -112031131 + RSINE1 SINE B4 59 136 -29 3 1001 298 317 148 43 chrX 54619253 54619439 -112030857 - B3 SINE B2 -6 210 6 3 1001 255 357 20 73 chrX 54619980 54620131 -112030165 - B1F1 SINE Alu 0 149 7 3 1001 327 280 180 0 chrX 54620037 54620137 -112030159 - ID_B1 SINE B4 -25 199 82 3 1001 1196 56 0 0 chrX 54620151 54620295 -112030001 + B1_Mus2 SINE Alu 2 145 -2 3 1001 355 176 15 0 chrX 54620298 54620366 -112029930 - L1MD LINE L1 -985 5161 5093 3 1001 429 139 14 0 chrX 54620482 54620554 -112029742 - PB1D9 SINE Alu 0 120 48 3 1001 1166 81 0 0 chrX 54620959 54621107 -112029189 + B1_Mus1 SINE Alu 1 148 0 3 1001 314 290 0 0 chrX 54621135 54621204 -112029092 + B4 SINE B4 1 69 -223 3 1001 246 86 0 0 chrX 54621198 54621233 -112029063 - PB1D7 SINE Alu -60 60 26 3 1001 523 254 35 21 chrX 54621305 54621450 -112028846 - B1F2 SINE Alu -2 147 1 3 1001 247 163 0 0 chrX 54622327 54622370 -112027926 + tRNA-Leu-TTG tRNA tRNA 1 43 -43 3 1001 333 230 71 43 chrX 54622802 54622907 -112027389 + B1F SINE Alu 13 127 0 3 1001 25 0 0 0 chrX 54622987 54623012 -112027284 + AT_rich Low_complexity Low_complexity 1 25 0 3 1001 432 294 8 23 chrX 54623041 54623170 -112027126 - ID_B1 SINE B4 -6 218 92 3 1001 450 269 17 9 chrX 54623524 54623640 -112026656 - PB1D9 SINE Alu -2 118 2 3 1001 4424 202 34 13 chrX 54623776 54624693 -112025603 - Lx2B LINE L1 -2 6998 6063 3 1001 1227 278 86 10 chrX 54624827 54625328 -112024968 - L1MB8 LINE L1 -218 5960 5422 3 1001 26 0 0 0 chrX 54625328 54625354 -112024942 + AT_rich Low_complexity Low_complexity 1 26 0 3 1001 237 296 12 24 chrX 54625467 54625550 -112024746 - ID4 SINE ID -1 82 1 3 1001 1306 106 16 16 chrX 54625595 54625786 -112024510 + B2_Mm2 SINE B2 2 192 -3 3 1001 298 344 10 20 chrX 54625995 54626093 -112024203 - PB1D10 SINE Alu -15 102 6 3 1001 619 239 195 3 chrX 54626133 54626363 -112023933 - L1MA6 LINE L1 -61 6230 5975 3 1001 339 278 62 44 chrX 54626486 54626733 -112023563 - L1MA6 LINE L1 -368 5932 5681 3 1001 558 278 0 0 chrX 54626739 54626865 -112023431 + RSINE1 SINE B4 4 129 -36 3 1001 401 280 71 16 chrX 54626921 54627048 -112023248 - B1F SINE Alu -6 143 10 3 1001 315 227 67 83 chrX 54627169 54627289 -112023007 + Lx8 LINE L1 7272 7389 -84 3 1001 719 252 17 7 chrX 54627492 54627730 -112022566 + L1M2 LINE L1 4445 4683 -1463 3 1001 233 320 39 0 chrX 54627979 54628057 -112022239 + B3A SINE B2 92 172 -26 3 1001 333 0 0 0 chrX 54628060 54628097 -112022199 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1001 662 227 15 142 chrX 54628129 54628396 -112021900 + L1M2 LINE L1 4739 4971 -1172 3 1001 323 241 8 115 chrX 54628396 54628415 -112021881 + MT2B LTR ERVL 149 154 -447 3 1001 843 158 7 0 chrX 54628415 54628554 -112021742 + B1_Mur4 SINE Alu 2 141 -9 3 1001 237 128 0 0 chrX 54628568 54628615 -112021681 + (A)n Simple_repeat Simple_repeat 1 47 0 3 1001 1103 82 7 0 chrX 54628624 54628771 -112021525 + B1_Mus1 SINE Alu 1 148 0 3 1001 287 241 155 45 chrX 54628777 54628977 -112021319 + L1M2 LINE L1 4972 5193 -947 3 1001 261 0 0 0 chrX 54629014 54629043 -112021253 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1001 346 302 51 8 chrX 54629043 54629160 -112021136 - RSINE1 SINE B4 -41 124 3 3 1001 274 248 70 52 chrX 54629428 54629543 -112020753 - PB1D10 SINE Alu 0 117 1 3 1001 469 263 16 33 chrX 54629573 54629695 -112020601 + PB1D7 SINE Alu 1 120 0 3 1001 192 77 0 0 chrX 54629696 54629722 -112020574 + (GGAA)n Simple_repeat Simple_repeat 4 29 0 3 1001 424 271 201 25 chrX 54629722 54630036 -112020260 + L1M2 LINE L1 5352 5720 -580 3 1001 235 233 40 40 chrX 54630273 54630349 -112019947 - L1ME1 LINE L1 -216 5962 5887 3 1001 305 295 42 0 chrX 54630356 54630451 -112019845 - B3 SINE B2 -32 184 86 3 1001 347 273 57 7 chrX 54630469 54630609 -112019687 - L1ME1 LINE L1 -313 5866 5720 3 1001 564 252 0 0 chrX 54630620 54630735 -112019561 - PB1D7 SINE Alu -5 115 1 3 1001 442 187 0 0 chrX 54631151 54631226 -112019070 - ID_B1 SINE B4 -21 203 129 3 1001 381 210 62 0 chrX 54631155 54631236 -112019060 - B1F SINE Alu -28 121 36 3 1001 1186 62 0 0 chrX 54631249 54631395 -112018901 + B1_Mm SINE Alu 2 147 0 3 1001 256 218 83 94 chrX 54631418 54631514 -112018782 + B1_Mur1 SINE Alu 55 149 0 3 1001 180 0 0 0 chrX 54631588 54631608 -112018688 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1001 559 244 206 63 chrX 54632401 54632727 -112017569 - Lx7 LINE L1 -1869 5827 5437 3 1001 1422 66 27 0 chrX 54632727 54632910 -112017386 + B2_Mm1a SINE B2 1 188 -5 3 1001 559 236 217 69 chrX 54632910 54633002 -112017294 - Lx7 LINE L1 -444 5436 5335 3 1001 609 224 200 0 chrX 54633011 54633181 -112017115 + B3 SINE B2 9 212 -4 3 1001 486 205 384 19 chrX 54633200 54633359 -112016937 + ID_B1 SINE B4 2 218 -6 4 1001 584 259 14 7 chrX 54633363 54633503 -112016793 + B1F SINE Alu 1 141 -8 4 1001 263 300 0 0 chrX 54633677 54633737 -112016559 - ID_B1 SINE B4 -80 144 85 4 1001 592 236 90 22 chrX 54633790 54633968 -112016328 + ID_B1 SINE B4 1 190 -34 4 1001 246 330 88 0 chrX 54634399 54634490 -112015806 + LTR41 LTR ERVL 426 524 -244 4 1001 418 248 41 68 chrX 54635493 54635640 -112014656 + ID_B1 SINE B4 2 144 -80 4 1001 769 170 50 0 chrX 54635684 54635825 -112014471 + B1_Mur2 SINE Alu 2 149 0 4 1001 216 0 0 0 chrX 54636568 54636592 -112013704 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 4 1001 240 221 43 29 chrX 54637332 54637402 -112012894 - ID4_ SINE ID -11 72 2 4 1001 205 27 0 75 chrX 54641024 54641064 -112009232 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 4 1001 22 0 0 0 chrX 54642426 54642448 -112007848 + AT_rich Low_complexity Low_complexity 1 22 0 4 1001 221 244 40 188 chrX 54642454 54642555 -112007741 - B1F1 SINE Alu -63 86 1 4 1001 1142 75 0 0 chrX 54643743 54643890 -112006406 - B1_Mus2 SINE Alu 0 147 1 4 1001 1025 62 0 94 chrX 54643927 54644087 -112006209 + B1_Mus2 SINE Alu 2 146 -1 4 1001 210 173 167 39 chrX 54644200 54644278 -112006018 + B1_Mur2 SINE Alu 62 149 0 4 1001 253 321 35 35 chrX 54646803 54646919 -112003377 + PB1D10 SINE Alu 1 116 -1 4 1001 381 255 9 19 chrX 54646973 54647093 -112003203 - B1F SINE Alu -1 119 1 4 1001 207 69 0 0 chrX 54647152 54647181 -112003115 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 4 1001 272 184 211 0 chrX 54647191 54647267 -112003029 - B1_Mur3 SINE Alu -21 128 37 4 1001 422 287 30 15 chrX 54647285 54647416 -112002880 + RCHARR1 DNA MER1_type 3 135 -839 4 1001 871 204 269 34 chrX 54647421 54647788 -112002508 - MT2A LTR ERVL -49 535 111 4 1001 891 142 22 0 chrX 54647819 54647953 -112002343 + B1_Mus2 SINE Alu 3 139 -8 4 1001 360 232 51 51 chrX 54648002 54648120 -112002176 - MT2A LTR ERVL -415 118 1 4 1001 240 320 59 10 chrX 54648256 54648357 -112001939 + PB1D9 SINE Alu 1 106 -14 4 1001 899 200 48 19 chrX 54648365 54648574 -112001722 + RCHARR1 DNA MER1_type 518 732 -242 4 1001 553 243 47 73 chrX 54648873 54649064 -112001232 - B3 SINE B2 -9 186 1 4 1001 316 305 50 58 chrX 54649143 54649159 -112001137 - ID_B1 SINE B4 -3 221 173 4 1001 491 269 0 40 chrX 54649159 54649189 -112001107 - B1_Mur1 SINE Alu -29 120 95 4 1001 1341 171 139 57 chrX 54649189 54649542 -112000754 + RLTR14 LTR ERV1 1 382 0 4 1001 316 305 50 58 chrX 54649542 54649634 -112000662 - ID_B1 SINE B4 -52 172 84 4 1001 2881 214 55 136 chrX 54649660 54649818 -112000478 + Lx7 LINE L1 6463 6651 -1045 4 1001 2257 141 16 5 chrX 54649818 54650202 -112000094 + Lx LINE L1 6263 6650 -4 4 1001 2881 214 55 136 chrX 54650202 54650373 -111999923 + Lx7 LINE L1 6652 6813 -883 4 1001 4108 90 56 0 chrX 54650373 54650942 -111999354 - MT2B LTR ERVL 0 601 1 4 1001 2881 214 55 136 chrX 54650942 54651160 -111999136 + Lx7 LINE L1 6814 7029 -667 4 1001 225 0 0 0 chrX 54651160 54651185 -111999111 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 1001 2881 214 55 136 chrX 54651185 54651457 -111998839 + Lx7 LINE L1 7030 7223 -473 4 1001 1384 129 22 4 chrX 54651457 54651682 -111998614 + Lx4A LINE L1 6828 7056 -2 4 1001 2881 214 55 136 chrX 54651682 54651824 -111998472 + Lx7 LINE L1 7224 7349 -347 4 1001 841 131 54 49 chrX 54651874 54652058 -111998238 + B2_Mm2 SINE B2 2 186 -9 4 1001 32 0 0 0 chrX 54652066 54652098 -111998198 + AT_rich Low_complexity Low_complexity 1 32 0 4 1001 246 268 19 58 chrX 54652124 54652227 -111998069 - ID_B1 SINE B4 -38 186 88 4 1001 368 219 14 0 chrX 54652738 54652811 -111997485 - ID_B1 SINE B4 -36 188 115 4 1001 195 42 0 0 chrX 54652874 54652898 -111997398 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 4 1001 723 160 0 0 chrX 54652910 54653029 -111997267 - PB1D9 SINE Alu 0 120 2 4 1001 225 227 0 0 chrX 54653072 54653116 -111997180 - B1_Mus1 SINE Alu -96 52 9 4 1001 652 203 0 29 chrX 54653165 54653302 -111996994 - B1_Mur4 SINE Alu -16 134 2 4 1001 47 27 0 26 chrX 54653322 54653367 -111996929 + AT_rich Low_complexity Low_complexity 1 45 0 4 1001 180 0 0 0 chrX 54653367 54653387 -111996909 + (ATTG)n Simple_repeat Simple_repeat 1 20 0 4 1001 1128 77 0 0 chrX 54653387 54653530 -111996766 - B1_Mm SINE Alu -4 143 1 4 1001 47 27 0 26 chrX 54653530 54653559 -111996737 + AT_rich Low_complexity Low_complexity 1 28 0 4 1001 321 280 0 0 chrX 54653689 54653760 -111996536 - ID_B1 SINE B4 0 224 154 4 1001 1913 152 108 8 chrX 54653760 54654138 -111996158 + MTC LTR MaLR 1 416 -5 4 1001 249 282 22 66 chrX 54654125 54654216 -111996080 - PB1D10 SINE Alu -30 87 1 4 1001 1154 88 0 0 chrX 54654259 54654407 -111995889 + B1_Mus1 SINE Alu 1 148 0 4 1001 252 0 0 0 chrX 54654415 54654443 -111995853 + (CAA)n Simple_repeat Simple_repeat 1 28 0 4 1001 2349 98 121 62 chrX 54654499 54654903 -111995393 - RLTR23 LTR ERV1 0 430 3 4 1001 488 256 62 8 chrX 54654941 54655071 -111995225 - B3A SINE B2 -3 195 59 4 1001 495 33 0 0 chrX 54655284 54655345 -111994951 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 1001 333 0 0 0 chrX 54655345 54655381 -111994915 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 1001 588 186 52 91 chrX 54655399 54655553 -111994743 + B1_Mur3 SINE Alu 1 148 -1 4 1001 348 127 0 0 chrX 54655557 54655612 -111994684 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 4 1001 734 277 166 21 chrX 54655714 54655831 -111994465 + MLT2B1 LTR ERVL 66 192 -328 4 1001 191 36 36 0 chrX 54655831 54655859 -111994437 + (CAA)n Simple_repeat Simple_repeat 2 30 0 4 1001 734 282 147 32 chrX 54655859 54656173 -111994123 + MLT2B1 LTR ERVL 193 542 -13 4 1002 318 151 0 0 chrX 54657626 54657699 -111992597 + (TA)n Simple_repeat Simple_repeat 2 74 0 4 1002 201 161 0 0 chrX 54657755 54657786 -111992510 + (CATATA)n Simple_repeat Simple_repeat 2 32 0 4 1002 2078 139 87 75 chrX 54658087 54658476 -111991820 + ORR1B1 LTR MaLR 1 394 0 4 1002 860 212 70 15 chrX 54658613 54658814 -111991482 - B3 SINE B2 0 216 5 4 1002 1268 215 43 84 chrX 54658840 54659210 -111991086 - ORR1D1 LTR MaLR 0 374 20 4 1002 365 217 209 0 chrX 54659502 54659617 -111990679 - ID_B1 SINE B4 -4 220 82 4 1002 326 290 43 58 chrX 54659947 54660086 -111990210 + MTEa LTR MaLR 237 373 -6 4 1002 363 293 25 82 chrX 54660086 54660331 -111989965 + L1M4 LINE L1 3958 4188 -1958 4 1002 314 268 30 30 chrX 54660510 54660610 -111989686 + B1F SINE Alu 43 142 -7 4 1002 216 273 91 0 chrX 54660668 54660734 -111989562 + PB1D9 SINE Alu 44 115 -5 4 1002 192 143 0 0 chrX 54660737 54660779 -111989517 + (GA)n Simple_repeat Simple_repeat 2 43 0 4 1002 195 191 15 31 chrX 54660784 54660849 -111989447 + GA-rich Low_complexity Low_complexity 1 64 0 4 1002 1250 55 6 0 chrX 54660870 54661034 -111989262 - L1_Mus1 LINE L1 -1 6566 6402 4 1002 380 196 0 107 chrX 54661063 54661166 -111989130 + B1_Mur1 SINE Alu 58 149 0 4 1002 204 40 0 0 chrX 54661166 54661191 -111989105 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 4 1002 37 23 0 0 chrX 54661337 54661381 -111988915 + AT_rich Low_complexity Low_complexity 1 44 0 4 1002 447 211 16 66 chrX 54661382 54661504 -111988792 - Lx4A LINE L1 -3 7055 6940 4 1002 407 328 0 0 chrX 54661524 54661649 -111988647 - B1_Mur1 SINE Alu -6 143 19 4 1002 403 279 32 91 chrX 54661820 54661974 -111988322 - RSINE1 SINE B4 -20 145 1 4 1002 784 37 0 27 chrX 54662682 54662794 -111987502 - L1_Mus1 LINE L1 0 6567 6459 4 1002 378 107 0 0 chrX 54663409 54663465 -111986831 + (TTA)n Simple_repeat Simple_repeat 2 57 0 4 1002 207 0 0 0 chrX 54663545 54663568 -111986728 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1002 216 282 13 66 chrX 54663710 54663786 -111986510 - B1F SINE Alu -59 90 19 4 1002 180 245 0 0 chrX 54663798 54663851 -111986445 + CT-rich Low_complexity Low_complexity 2 54 0 4 1002 488 223 10 0 chrX 54663856 54663959 -111986337 - B1_Mur4 SINE Alu -1 149 46 4 1002 221 57 29 0 chrX 54664086 54664121 -111986175 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 1002 313 286 29 23 chrX 54664215 54664387 -111985909 + CT-rich Low_complexity Low_complexity 3 175 0 4 1002 280 350 0 0 chrX 54664443 54664586 -111985710 + T-rich Low_complexity Low_complexity 1 143 0 4 1002 445 319 14 0 chrX 54664606 54664747 -111985549 - ID_B1 SINE B4 -5 219 77 4 1002 324 333 11 22 chrX 54664748 54664929 -111985367 + CT-rich Low_complexity Low_complexity 2 180 0 4 1002 289 345 18 18 chrX 54664941 54665109 -111985187 + CT-rich Low_complexity Low_complexity 4 171 0 4 1002 196 235 35 23 chrX 54665146 54665233 -111985063 + CT-rich Low_complexity Low_complexity 5 92 0 4 1002 415 246 25 8 chrX 54665233 54665352 -111984944 - B1F2 SINE Alu -20 129 9 4 1002 477 297 11 37 chrX 54665366 54665628 -111984668 + CT-rich Low_complexity Low_complexity 1 255 0 4 1002 230 204 0 41 chrX 54665780 54665877 -111984419 + CT-rich Low_complexity Low_complexity 3 95 0 4 1002 405 225 180 0 chrX 54665915 54666026 -111984270 - B1F1 SINE Alu 0 149 19 4 1002 500 227 23 30 chrX 54666794 54666926 -111983370 + B3 SINE B2 85 215 -1 4 1002 758 156 48 41 chrX 54667065 54667212 -111983084 + B1_Mur2 SINE Alu 1 148 -1 4 1002 288 266 0 0 chrX 54667259 54667323 -111982973 - MTD LTR MaLR 0 419 356 4 1002 1972 184 11 3 chrX 54667544 54667919 -111982377 + Lx LINE L1 6277 6654 0 4 1002 341 171 14 0 chrX 54668148 54668218 -111982078 - Lx5 LINE L1 -812 6238 6168 4 1002 766 184 13 20 chrX 54668542 54668692 -111981604 - B1_Mur4 SINE Alu 0 150 2 4 1002 545 40 13 0 chrX 54669194 54669270 -111981026 + (GA)n Simple_repeat Simple_repeat 1 77 0 4 1002 210 222 18 36 chrX 54669338 54669394 -111980902 - B1F SINE Alu -27 122 68 4 1002 294 348 43 0 chrX 54669472 54669564 -111980732 - B1F SINE Alu -53 96 1 4 1002 183 42 0 0 chrX 54669593 54669617 -111980679 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 1002 684 282 7 0 chrX 54669793 54669942 -111980354 + RSINE1 SINE B4 11 160 -5 5 1002 813 242 55 54 chrX 54670155 54670415 -111979881 + RLTR33 LTR ERVK 1 319 -177 5 1002 670 186 263 23 chrX 54671010 54671181 -111979115 - B3 SINE B2 0 216 5 5 1002 24 0 0 0 chrX 54671300 54671324 -111978972 + AT_rich Low_complexity Low_complexity 1 24 0 5 1002 1912 210 10 0 chrX 54671593 54671979 -111978317 - Lx6 LINE L1 -583 6877 6488 5 1002 186 133 0 0 chrX 54672050 54672080 -111978216 + (TTTC)n Simple_repeat Simple_repeat 4 33 0 5 1002 226 321 202 0 chrX 54672104 54672137 -111978159 - PB1D10 SINE Alu -5 112 12 5 1002 248 314 0 0 chrX 54672137 54672188 -111978108 - ID_B1 SINE B4 -81 143 93 5 1002 1150 261 31 19 chrX 54672282 54672641 -111977655 + RCHARR1 DNA MER1_type 476 838 -136 5 1002 7463 64 21 6 chrX 54672650 54673938 -111976358 - L1_Mus2 LINE L1 0 6566 5236 5 1002 486 0 0 0 chrX 54673938 54673992 -111976304 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 5 1002 7463 93 40 2 chrX 54673992 54674520 -111975776 - L1_Mus2 LINE L1 -648 5235 4706 5 1002 820 243 81 0 chrX 54674711 54674896 -111975400 - B3 SINE B2 -11 205 6 5 1002 1194 55 0 0 chrX 54675249 54675394 -111974902 - B1_Mus1 SINE Alu -2 146 2 5 1002 203 349 184 0 chrX 54675587 54675739 -111974557 + L3 LINE CR1 4209 4388 -101 5 1002 256 254 0 0 chrX 54675861 54675924 -111974372 - L1M2 LINE L1 -700 5591 5529 5 1002 217 283 0 19 chrX 54676732 54676786 -111973510 + C-rich Low_complexity Low_complexity 3 55 0 5 1002 282 318 45 0 chrX 54676794 54676882 -111973414 - PB1D7 SINE Alu -28 92 1 5 1002 404 247 0 0 chrX 54676806 54676883 -111973413 - ID_B1 SINE B4 -67 157 81 5 1002 1439 141 41 59 chrX 54676959 54677230 -111973066 + Lx4A LINE L1 6790 7055 -3 5 1002 40 39 0 38 chrX 54677260 54677340 -111972956 + AT_rich Low_complexity Low_complexity 1 77 0 5 1002 8019 137 15 31 chrX 54677340 54678027 -111972269 - Lx2 LINE L1 -3 6994 6302 5 1002 1596 158 52 47 chrX 54678027 54678114 -111972182 + RMER17C LTR ERVK 3 90 -320 5 1002 522 0 0 0 chrX 54678114 54678172 -111972124 + (TC)n Simple_repeat Simple_repeat 2 59 0 5 1002 1596 158 52 47 chrX 54678172 54678490 -111971806 + RMER17C LTR ERVK 91 409 -1 5 1002 8019 135 9 16 chrX 54678490 54679524 -111970772 - Lx2 LINE L1 -696 6301 5294 5 1002 2959 65 0 8 chrX 54679526 54679911 -111970385 - L1Md_F2 LINE L1 -12 6570 6189 5 1002 2044 94 12 2 chrX 54679911 54680258 -111970038 - L1VL1 LINE L1 -2334 1364 1022 5 1002 532 101 0 22 chrX 54680260 54680351 -111969945 + (TTTC)n Simple_repeat Simple_repeat 4 92 0 5 1002 1047 75 0 0 chrX 54680366 54680500 -111969796 - B1_Mus1 SINE Alu -14 134 1 5 1002 4176 120 65 1 chrX 54680500 54681182 -111969114 - L1VL4 LINE L1 -5390 912 188 5 1002 207 0 0 0 chrX 54681191 54681214 -111969082 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1002 1027 86 0 0 chrX 54681214 54681353 -111968943 - B1_Mus1 SINE Alu 0 148 10 5 1002 4170 124 9 0 chrX 54681390 54682082 -111968214 - Lx2 LINE L1 -1225 4652 3955 5 1002 1300 132 0 50 chrX 54682082 54682321 -111967975 + Lx LINE L1 6422 6648 -6 5 1002 368 279 29 66 chrX 54682353 54682474 -111967822 - B1F SINE Alu -28 121 6 5 1002 354 286 0 0 chrX 54682776 54682860 -111967436 + PB1D10 SINE Alu 33 116 -1 5 1002 254 232 17 51 chrX 54682928 54683046 -111967250 + Lx8 LINE L1 7360 7473 0 5 1002 1691 201 45 40 chrX 54683082 54683486 -111966810 - Lx6 LINE L1 -13 7447 7042 5 1002 261 312 12 12 chrX 54683622 54683703 -111966593 - ID4_ SINE ID 0 83 3 5 1002 284 264 125 54 chrX 54683770 54683882 -111966414 + MIR3 SINE MIR 37 156 -52 5 1002 426 291 73 39 chrX 54683892 54684096 -111966200 - MER20B DNA MER1_type 0 783 573 5 1002 475 325 99 56 chrX 54684202 54684486 -111965810 - MER20B DNA MER1_type -362 421 126 5 1002 182 33 0 62 chrX 54685040 54685072 -111965224 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 5 1002 268 221 53 27 chrX 54685072 54685162 -111965134 - B1F SINE Alu -1 149 58 5 1002 285 75 0 0 chrX 54685441 54685481 -111964815 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1002 309 296 110 9 chrX 54685481 54685590 -111964706 - RSINE1 SINE B4 -41 124 5 5 1002 204 37 0 0 chrX 54685792 54685803 -111964493 + (A)n Simple_repeat Simple_repeat 1 11 0 5 1002 1088 88 0 0 chrX 54685803 54685950 -111964346 + B1_Mus2 SINE Alu 1 147 0 5 1002 204 37 0 0 chrX 54685950 54685965 -111964331 + (A)n Simple_repeat Simple_repeat 1 15 0 5 1002 502 226 28 0 chrX 54686112 54686218 -111964078 - B1_Mur2 SINE Alu -8 141 33 5 1002 229 380 0 0 chrX 54686537 54686608 -111963688 - tRNA-Ala-GCY_ tRNA tRNA -4 71 1 5 1002 236 321 88 9 chrX 54686626 54686644 -111963652 - B1F SINE Alu 0 149 28 5 1002 356 266 21 11 chrX 54686644 54686739 -111963557 - ID_B1 SINE B4 -20 204 109 5 1002 2520 238 56 15 chrX 54687459 54688142 -111962154 - Lx8 LINE L1 -326 7147 6437 5 1002 1100 186 63 25 chrX 54688766 54689003 -111961293 - ORR1D1 LTR MaLR 0 374 129 5 1002 889 153 0 34 chrX 54689017 54689166 -111961130 + B1_Mur4 SINE Alu 7 150 0 5 1002 603 197 110 0 chrX 54689167 54689294 -111961002 - ORR1D1 LTR MaLR -233 141 1 5 1002 212 310 0 14 chrX 54689310 54689382 -111960914 + (TG)n Simple_repeat Simple_repeat 2 72 0 5 1002 205 261 0 0 chrX 54689382 54689428 -111960868 + GA-rich Low_complexity Low_complexity 2 47 0 5 1002 587 258 0 16 chrX 54689429 54689555 -111960741 - RSINE1 SINE B4 -39 126 3 5 1002 1160 207 13 43 chrX 54689827 54690059 -111960237 - URR1B DNA MER1_type 0 225 1 5 1002 763 194 29 7 chrX 54690921 54691061 -111959235 + B1_Mur2 SINE Alu 1 143 -6 5 1002 294 50 0 0 chrX 54691263 54691303 -111958993 + (TATG)n Simple_repeat Simple_repeat 1 40 0 5 1002 752 273 94 15 chrX 54691309 54691510 -111958786 - B4 SINE B4 -74 218 2 5 1002 2013 54 153 10 chrX 54691618 54691919 -111958377 - L1_Mus3 LINE L1 -3 6635 6292 5 1002 347 278 11 0 chrX 54691921 54692011 -111958285 - ID_B1 SINE B4 -129 95 5 5 1002 539 256 22 29 chrX 54692019 54692156 -111958140 - ID_B1 SINE B4 -2 222 87 5 1002 411 21 0 0 chrX 54693601 54693649 -111956647 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 1002 285 89 0 0 chrX 54693649 54693693 -111956603 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1002 352 333 26 18 chrX 54693702 54693815 -111956481 - ID_B1 SINE B4 -109 115 2 5 1002 25 31 0 0 chrX 54693974 54694006 -111956290 + AT_rich Low_complexity Low_complexity 1 32 0 5 1002 252 59 0 0 chrX 54694089 54694123 -111956173 + (GTTTG)n Simple_repeat Simple_repeat 1 34 0 5 1002 435 280 88 0 chrX 54694123 54694248 -111956048 - B1_Mur1 SINE Alu -13 136 1 5 1002 186 71 0 0 chrX 54694321 54694349 -111955947 + (TTG)n Simple_repeat Simple_repeat 1 28 0 5 1002 291 340 40 0 chrX 54694349 54694449 -111955847 - PB1D10 SINE Alu -13 104 1 5 1002 1276 207 86 51 chrX 54694535 54694871 -111955425 - ORR1D2 LTR MaLR -7 363 16 5 1002 325 314 113 28 chrX 54694888 54695065 -111955231 - HAL1 LINE L1 -1478 1029 838 5 1002 281 280 105 48 chrX 54695109 54695233 -111955063 + B1F2 SINE Alu 4 134 -15 5 1002 369 0 0 0 chrX 54695331 54695372 -111954924 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1002 309 389 22 62 chrX 54695435 54695709 -111954587 - HAL1 LINE L1 -1775 732 470 5 1002 634 259 19 42 chrX 54695981 54696157 -111954139 - B3A SINE B2 -7 209 33 5 1002 437 271 48 61 chrX 54696307 54696472 -111953824 - RSINE1 SINE B4 0 165 3 5 1002 470 227 78 8 chrX 54696570 54696699 -111953597 - B1_Mur2 SINE Alu -11 138 1 5 1002 283 250 54 36 chrX 54696999 54697111 -111953185 + ID_B1 SINE B4 110 223 -1 5 1002 11404 91 15 5 chrX 54697234 54699813 -111950483 - L1VL2 LINE L1 -945 2670 64 5 1002 6322 187 47 50 chrX 54699822 54701478 -111948818 - Lx2B LINE L1 -4 6996 5351 5 1002 5931 144 66 14 chrX 54701478 54702489 -111947807 - Lx4A LINE L1 -4 7054 5991 5 1002 3706 204 22 174 chrX 54702489 54703383 -111946913 - Lx2B LINE L1 -530 5350 4629 5 1002 7107 37 0 0 chrX 54703388 54704232 -111946064 - L1Md_A LINE L1 0 6582 5739 5 1002 5779 23 0 0 chrX 54704232 54704935 -111945361 + L1Md_A LINE L1 5096 5798 -85 5 1002 348 133 67 0 chrX 54704940 54705015 -111945281 - Lx2B LINE L1 -1251 4626 4547 5 1002 566 286 20 15 chrX 54705085 54705287 -111945009 - Lx8 LINE L1 -10 7463 7261 5 1002 613 164 139 0 chrX 54705621 54705743 -111944553 - B3 SINE B2 -76 140 2 5 1002 5910 81 10 9 chrX 54706006 54706806 -111943490 - L1_Mus4 LINE L1 -7 6629 5829 5 1002 7885 88 25 16 chrX 54706821 54707081 -111943215 - L1VL4 LINE L1 -1411 2148 1890 5 1002 3305 64 0 21 chrX 54707081 54707514 -111942782 - L1Md_F2 LINE L1 -12 6570 6147 5 1002 7885 88 25 16 chrX 54707514 54708347 -111941949 - L1VL4 LINE L1 -1670 1889 1043 5 1002 974 59 0 0 chrX 54708347 54708482 -111941814 - L1Md_F2 LINE L1 0 6582 6448 5 1002 7885 110 26 10 chrX 54708482 54709283 -111941013 - L1VL4 LINE L1 -2517 1042 228 5 1002 561 29 0 0 chrX 54709415 54709484 -111940812 + L1Md_F2 LINE L1 6207 6275 -307 5 1002 373 58 0 0 chrX 54709485 54709537 -111940759 - L1VL4 LINE L1 -5505 797 746 5 1002 621 48 4 0 chrX 54709536 54709630 -111940666 - L1Md_F2 LINE L1 -465 6102 6006 5 1002 11778 59 10 7 chrX 54709721 54711994 -111938302 - L1Md_F2 LINE L1 -14 6568 4289 5 1002 770 193 29 8 chrX 54712158 54712323 -111937973 + B3 SINE B2 1 174 -19 5 1002 273 286 12 38 chrX 54712503 54712583 -111937713 + ID4_ SINE ID 3 80 -3 5 1002 211 364 163 7 chrX 54712678 54712819 -111937477 + MIRc SINE MIR 79 241 -27 5 1002 842 179 7 0 chrX 54713925 54714070 -111936226 + B1_Mur3 SINE Alu 1 146 -3 5 1002 445 320 40 13 chrX 54714395 54714547 -111935749 - RSINE1 SINE B4 -7 158 3 5 1002 453 244 46 11 chrX 54714720 54714894 -111935402 - HAL1 LINE L1 -1352 1155 976 5 1002 240 365 101 16 chrX 54714948 54715196 -111935100 - HAL1 LINE L1 -2063 444 176 5 1002 401 242 74 0 chrX 54717097 54717192 -111933104 + ID_B1 SINE B4 6 107 -117 5 1002 252 272 0 12 chrX 54717625 54717707 -111932589 - L1MA5 LINE L1 -12 6288 6208 5 1002 247 250 31 125 chrX 54717776 54717872 -111932424 + B3A SINE B2 98 184 -14 6 1002 3277 11 0 0 chrX 54718019 54718389 -111931907 - L1Md_T LINE L1 0 6582 6213 6 1002 7472 55 11 5 chrX 54718446 54719605 -111930691 - L1Md_F2 LINE L1 0 6582 5417 6 1002 4606 72 2 3 chrX 54719605 54720207 -111930089 + L1Md_F2 LINE L1 5982 6582 0 6 1002 302 307 105 0 chrX 54720647 54720761 -111929535 - PB1 SINE Alu -1 126 1 6 1002 779 156 34 41 chrX 54721261 54721408 -111928888 + B1_Mur2 SINE Alu 3 148 -1 6 1002 702 24 0 0 chrX 54721408 54721492 -111928804 + (TG)n Simple_repeat Simple_repeat 2 85 0 6 1002 180 152 0 0 chrX 54722363 54722396 -111927900 + (TTAGGG)n Simple_repeat Simple_repeat 2 34 0 6 1002 438 240 20 0 chrX 54722687 54722787 -111927509 - MER68-int LTR ERVL -68 2922 2821 6 1002 1232 151 9 49 chrX 54722834 54723057 -111927239 - Lx3B LINE L1 -3 6970 6757 6 1002 1423 199 84 8 chrX 54723142 54723497 -111926799 - Lx9 LINE L1 0 7644 7263 6 1002 1425 159 28 4 chrX 54723497 54723749 -111926547 + Lx9 LINE L1 6988 7245 -399 6 1002 279 360 0 0 chrX 54723873 54723973 -111926323 - RMER15 LTR ERVL -105 470 371 6 1002 688 336 40 0 chrX 54724030 54724280 -111926016 - Lx8 LINE L1 -289 7184 6925 6 1002 616 301 43 5 chrX 54724273 54724460 -111925836 + Lx8 LINE L1 6330 6523 -950 6 1002 1078 285 50 19 chrX 54724614 54724975 -111925321 + Lx8 LINE L1 6525 6896 -577 6 1002 446 263 100 50 chrX 54724976 54725136 -111925160 - MER68-int LTR ERVL -244 2746 2579 6 1002 920 234 25 20 chrX 54725208 54725409 -111924887 - B3 SINE B2 -11 205 4 6 1002 21 0 0 0 chrX 54725415 54725436 -111924860 + AT_rich Low_complexity Low_complexity 1 21 0 6 1002 21 71 0 0 chrX 54726000 54726042 -111924254 + AT_rich Low_complexity Low_complexity 1 42 0 6 1002 267 246 30 30 chrX 54726383 54726450 -111923846 + B4A SINE B4 1 67 -225 6 1002 855 191 91 111 chrX 54726430 54726553 -111923743 - ORR1C2 LTR MaLR -74 310 186 6 1002 504 116 0 0 chrX 54726553 54726648 -111923648 + (CA)n Simple_repeat Simple_repeat 2 96 0 6 1002 690 24 0 0 chrX 54726648 54726731 -111923565 + (GA)n Simple_repeat Simple_repeat 2 85 0 6 1002 855 191 91 111 chrX 54726731 54726859 -111923437 - ORR1C2 LTR MaLR -199 185 66 6 1002 1234 150 295 27 chrX 54726864 54727159 -111923137 - RLTR25A LTR ERVK -2 1101 728 6 1002 6528 77 9 1 chrX 54727159 54728133 -111922163 - L1_Mus2 LINE L1 -128 6438 5458 6 1002 189 0 0 0 chrX 54728149 54728170 -111922126 + (TTA)n Simple_repeat Simple_repeat 1 21 0 6 1002 5532 85 4 10 chrX 54728170 54728880 -111921416 - L1_Mus1 LINE L1 -10 6557 5852 6 1002 34578 89 14 7 chrX 54728880 54735220 -111915076 - L1Md_F2 LINE L1 -26 6556 168 6 1002 746 283 70 55 chrX 54735368 54735443 -111914853 - Tigger7 DNA MER2_type -1 2490 2415 6 1002 315 0 0 0 chrX 54735443 54735478 -111914818 + (TA)n Simple_repeat Simple_repeat 1 35 0 6 1002 746 283 70 55 chrX 54735478 54735746 -111914550 - Tigger7 DNA MER2_type -77 2414 2142 6 1002 819 283 66 17 chrX 54735751 54735992 -111914304 - Tigger7 DNA MER2_type -2184 307 55 6 1002 1013 245 29 5 chrX 54736371 54736576 -111913720 - B3 SINE B2 -6 210 1 6 1002 236 329 0 0 chrX 54736994 54737064 -111913232 - Lx8 LINE L1 -326 7147 7078 6 1002 3004 49 6 0 chrX 54737075 54737419 -111912877 - ORR1A0 LTR MaLR 0 346 1 6 1002 4864 33 2 3 chrX 54737419 54738022 -111912274 - ORR1A0-int LTR MaLR 0 1792 1191 6 1002 285 26 0 49 chrX 54738009 54738050 -111912246 - ORR1A0 LTR MaLR -307 39 1 6 1002 1194 268 17 121 chrX 54738379 54738669 -111911627 - Lx7 LINE L1 -385 7311 7043 6 1002 5200 80 35 40 chrX 54738669 54739390 -111910906 - Lx3_Mus LINE L1 -1 7008 6292 6 1002 1194 268 17 121 chrX 54739390 54739578 -111910718 - Lx7 LINE L1 -654 7042 6883 6 1002 351 60 0 0 chrX 54739578 54739628 -111910668 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 1002 1229 82 0 0 chrX 54739628 54739774 -111910522 - B1_Mus1 SINE Alu -1 147 2 6 1002 1988 154 6 43 chrX 54739797 54740143 -111910153 - Lx3C LINE L1 -4 6972 6640 6 1002 445 252 0 0 chrX 54740144 54740247 -111910049 - Lx7 LINE L1 -836 6860 6758 6 1002 374 210 0 0 chrX 54740251 54740313 -111909983 - B1_Mus1 SINE Alu -83 65 4 6 1002 310 309 12 12 chrX 54740313 54740331 -111909965 - B4 SINE B4 -141 149 70 6 1002 429 266 8 14 chrX 54740500 54740619 -111909677 + B1F1 SINE Alu 1 117 -3 6 1002 1085 256 46 25 chrX 54740987 54741271 -111909025 - B4A SINE B4 0 292 3 6 1002 490 228 0 19 chrX 54741496 54741599 -111908697 - PB1D10 SINE Alu -5 112 12 6 1002 2677 180 32 36 chrX 54742093 54742624 -111907672 - RMER1B Other Other -5 1061 533 6 1002 4728 142 27 21 chrX 54742588 54743412 -111906884 - Lx3C LINE L1 -229 6747 5917 6 1002 2684 149 0 5 chrX 54743577 54743989 -111906307 - MTC LTR MaLR 0 421 12 6 1002 324 0 0 0 chrX 54744146 54744182 -111906114 + (TC)n Simple_repeat Simple_repeat 2 37 0 6 1002 477 0 0 0 chrX 54744182 54744234 -111906062 + (TA)n Simple_repeat Simple_repeat 2 54 0 6 1002 481 312 24 0 chrX 54744260 54744385 -111905911 - RSINE1 SINE B4 -36 129 2 6 1002 195 100 0 0 chrX 54744441 54744471 -111905825 + (TATG)n Simple_repeat Simple_repeat 3 32 0 6 1002 683 283 7 0 chrX 54744472 54744610 -111905686 - RSINE1 SINE B4 -25 140 2 6 1002 4650 80 19 0 chrX 54744710 54745287 -111905009 - L1_Mus3 LINE L1 -2 6636 6049 6 1002 5258 187 50 14 chrX 54746570 54746998 -111903298 + RMER1B Other Other 2 450 -616 6 1002 348 24 0 0 chrX 54746998 54747039 -111903257 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1002 5258 187 50 14 chrX 54747039 54747638 -111902658 + RMER1B Other Other 451 1065 -1 6 1002 2858 172 38 11 chrX 54747718 54747967 -111902329 - Lx4A LINE L1 -547 6511 6263 6 1002 3500 13 42 0 chrX 54747967 54748347 -111901949 + MTA_Mm LTR MaLR 1 396 0 6 1002 2858 172 38 11 chrX 54748347 54748651 -111901645 - Lx4A LINE L1 -796 6262 5944 6 1002 3819 116 21 28 chrX 54748651 54749221 -111901075 + Lx4A LINE L1 6488 7053 -5 6 1002 832 220 24 73 chrX 54749255 54749461 -111900835 + B3 SINE B2 6 201 -15 6 1002 245 266 0 45 chrX 54751952 54752019 -111898277 - MamRep434 DNA TcMar -340 86 23 6 1002 215 133 22 0 chrX 54752417 54752462 -111897834 + CT-rich Low_complexity Low_complexity 3 48 0 6 1002 196 130 0 42 chrX 54755550 54755598 -111894698 + C-rich Low_complexity Low_complexity 6 51 0 6 1002 212 344 10 0 chrX 54756226 54756322 -111893974 + GA-rich Low_complexity Low_complexity 5 101 0 6 1002 216 374 17 6 chrX 54756379 54756551 -111893745 + GA-rich Low_complexity Low_complexity 2 175 0 6 1002 304 256 16 0 chrX 54757465 54757594 -111892702 + CT-rich Low_complexity Low_complexity 2 132 0 6 1002 231 344 115 0 chrX 54757645 54757741 -111892555 - MIR SINE MIR -88 174 68 6 1002 516 56 0 0 chrX 54759043 54759115 -111891181 + (TG)n Simple_repeat Simple_repeat 2 73 0 6 1002 207 0 0 0 chrX 54759660 54759683 -111890613 + (TGG)n Simple_repeat Simple_repeat 1 23 0 6 1002 1067 180 81 15 chrX 54759841 54760038 -111890258 + B3 SINE B2 1 210 -6 6 1002 372 189 0 0 chrX 54760364 54760438 -111889858 + A-rich Low_complexity Low_complexity 1 74 0 6 1002 202 333 76 0 chrX 54760776 54760881 -111889415 + MIR3 SINE MIR 14 126 -82 6 1002 276 193 55 33 chrX 54760930 54761021 -111889275 + Lx4B LINE L1 6961 7053 -5 6 1002 376 330 158 30 chrX 54761142 54761376 -111888920 + L1MEc LINE L1 40 303 -6097 6 1002 621 315 105 20 chrX 54761413 54761578 -111888718 + L1MEc LINE L1 431 613 -5787 6 1002 222 37 0 0 chrX 54761578 54761605 -111888691 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 6 1002 621 315 105 20 chrX 54761605 54761831 -111888465 + L1MEc LINE L1 614 854 -5546 6 1002 809 239 115 18 chrX 54761954 54762294 -111888002 + L1MEc LINE L1 1056 1428 -4972 6 1002 225 295 63 0 chrX 54762315 54762410 -111887886 + L1ME1 LINE L1 5483 5583 -596 6 1002 860 308 46 41 chrX 54762428 54762929 -111887367 + L1ME1 LINE L1 5652 6177 -2 6 1002 193 308 56 17 chrX 54763418 54763531 -111886765 - MIR SINE MIR -47 221 95 6 1002 21 36 0 0 chrX 54764347 54764375 -111885921 + AT_rich Low_complexity Low_complexity 1 28 0 6 1002 853 269 92 21 chrX 54764753 54765080 -111885216 - L1M4 LINE L1 -520 5664 5315 6 1002 185 348 94 54 chrX 54765087 54765236 -111885060 - MIR SINE MIR -74 188 34 6 1002 569 248 13 13 chrX 54765545 54765700 -111884596 - CR1_Mam LINE CR1 -545 1659 1505 6 1002 269 205 64 0 chrX 54765833 54765911 -111884385 + L1MB7 LINE L1 5905 5987 -197 6 1002 441 0 0 0 chrX 54766058 54766107 -111884189 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 1002 980 259 63 32 chrX 54766913 54767248 -111883048 - MLT1A0 LTR MaLR -3 464 10 6 1002 2699 189 82 19 chrX 54767614 54768153 -111882143 - RMER15 LTR ERVL -2 573 1 6 1002 387 0 0 0 chrX 54768458 54768501 -111881795 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1002 24 0 0 0 chrX 54768559 54768583 -111881713 + AT_rich Low_complexity Low_complexity 1 24 0 6 1002 409 235 102 7 chrX 54770273 54770410 -111879886 - L1MC5 LINE L1 -29 7932 7783 6 1002 236 270 40 10 chrX 54770442 54770543 -111879753 - L1MB8 LINE L1 -12 6166 6063 6 1002 600 292 6 99 chrX 54770543 54770714 -111879582 + RSINE1 SINE B4 4 158 -7 6 1002 314 238 13 1 chrX 54770872 54770959 -111879337 + L1M4 LINE L1 5694 5780 -403 6 1002 513 181 32 99 chrX 54771053 54771249 -111879047 - L1MB5 LINE L1 -340 5834 5659 6 1002 423 0 0 0 chrX 54771249 54771296 -111879000 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1002 593 307 0 24 chrX 54771323 54771490 -111878806 - MTE2a LTR MaLR -50 329 167 6 1002 2073 256 81 6 chrX 54771589 54772108 -111878188 - Lx8 LINE L1 -344 7129 6572 6 1002 806 273 115 19 chrX 54772220 54772586 -111877710 - L1MC5 LINE L1 -371 7590 7190 6 1002 216 260 74 37 chrX 54773951 54774059 -111876237 + MIRb SINE MIR 91 202 -66 6 1002 704 199 77 67 chrX 54775854 54776048 -111874248 - B3A SINE B2 -1 197 2 6 1002 427 231 65 24 chrX 54777981 54778105 -111872191 - LTR52 LTR ERVL -40 381 253 6 1002 311 323 59 15 chrX 54778093 54778228 -111872068 - MLT1B LTR MaLR -248 142 2 6 1002 594 222 43 33 chrX 54778228 54778428 -111871868 + MER33 DNA MER1_type 103 304 -20 6 1002 563 264 155 35 chrX 54778468 54778668 -111871628 + MER58A DNA MER1_type 1 224 0 6 1002 14459 83 7 10 chrX 54778685 54781375 -111868921 - L1_Mus2 LINE L1 0 6566 3888 6 1002 696 241 11 7 chrX 54781368 54781566 -111868730 + L1VL1 LINE L1 85 411 -6007 6 1002 239 305 0 47 chrX 54781993 54782079 -111868217 - MIRb SINE MIR -8 260 179 6 1002 1215 265 63 25 chrX 54782094 54782461 -111867835 + Tigger9b DNA MER2_type 1 381 -243 6 1002 239 322 209 7 chrX 54782478 54782631 -111867665 + Tigger9b DNA MER2_type 440 623 -1 6 1002 188 338 25 12 chrX 54783211 54783292 -111867004 + L3 LINE CR1 3955 4036 -453 7 1002 476 274 43 25 chrX 54783742 54783903 -111866393 - L1ME4a LINE L1 -8 6116 5953 7 1002 407 333 30 54 chrX 54783905 54784108 -111866188 + MIRc SINE MIR 7 204 -64 7 1002 354 283 10 0 chrX 54784268 54784367 -111865929 - L1ME4a LINE L1 -196 5928 5829 7 1002 220 324 14 14 chrX 54784491 54784560 -111865736 + L2 LINE L2 2503 2571 -848 7 1002 4648 69 5 19 chrX 54784862 54785543 -111864753 - L1Md_F2 LINE L1 0 6582 5998 7 1002 538 311 0 18 chrX 54785774 54785941 -111864355 - RSINE1 SINE B4 0 165 2 7 1002 224 405 15 0 chrX 54785998 54786129 -111864167 - L2 LINE L2 -784 2635 2503 7 1002 825 319 111 73 chrX 54786535 54787094 -111863202 + MLT1G LTR MaLR 10 589 -2 7 1002 1171 42 20 14 chrX 54787104 54787250 -111863046 + B1_Mus1 SINE Alu 1 147 -1 7 1002 555 56 0 0 chrX 54787253 54787324 -111862972 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 7 1002 349 315 137 8 chrX 54787330 54787564 -111862732 - L2 LINE L2 -620 2799 2536 7 125 545 282 234 38 chrX 54787851 54788142 -111862154 + MTEb LTR MaLR 1 348 -31 7 1003 1283 69 0 6 chrX 54788142 54788318 -111861978 + (TTCTCC)n Simple_repeat Simple_repeat 1 175 0 7 1003 660 107 0 0 chrX 54788486 54788598 -111861698 + (TG)n Simple_repeat Simple_repeat 2 113 0 7 1003 528 325 52 0 chrX 54788599 54788753 -111861543 - B3A SINE B2 -36 162 1 7 1003 682 268 300 58 chrX 54788753 54789289 -111861007 + L1ME2z LINE L1 5323 5990 -454 7 1003 438 69 0 0 chrX 54789289 54789347 -111860949 + (TG)n Simple_repeat Simple_repeat 2 59 0 7 1003 682 270 152 64 chrX 54789347 54789473 -111860823 + L1ME2z LINE L1 5991 6125 -319 7 1003 1552 80 0 0 chrX 54790600 54790799 -111859497 + L1_Mus1 LINE L1 6369 6567 0 7 1003 1164 109 0 0 chrX 54791239 54791386 -111858910 + B1_Mus2 SINE Alu 1 147 0 7 1003 184 338 13 13 chrX 54791788 54791863 -111858433 - MIRb SINE MIR -141 127 53 7 1003 6133 51 24 15 chrX 54792478 54793214 -111857082 + RLTR13C2 LTR ERVK 1 752 -56 7 1003 3227 47 5 42 chrX 54793214 54793617 -111856679 + RLTR10 LTR ERVK 1 388 -2 7 1003 6133 51 24 15 chrX 54793617 54793681 -111856615 + RLTR13C2 LTR ERVK 753 808 0 7 1003 776 328 19 26 chrX 54796266 54796573 -111853723 - MARNA DNA Mariner -175 411 107 7 1003 39401 6 0 0 chrX 54796651 54802218 -111848078 + L1Md_A LINE L1 20 5586 -297 7 1003 9597 4 0 0 chrX 54802218 54803214 -111847082 + L1Md_A LINE L1 5587 6582 0 7 1003 331 294 0 11 chrX 54803414 54803507 -111846789 - Lx8 LINE L1 -1175 6298 6207 7 1003 394 156 16 0 chrX 54803511 54803575 -111846721 + Lx8 LINE L1 6413 6477 -996 7 1003 234 0 0 0 chrX 54803846 54803872 -111846424 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 1003 3445 309 40 16 chrX 54803946 54805083 -111845213 + Lx8 LINE L1 6307 7471 -2 7 1003 1129 244 16 38 chrX 54806247 54806563 -111843733 - L1MB2 LINE L1 -32 6139 5831 7 1003 4310 59 0 4 chrX 54806577 54807086 -111843210 - L1Md_F2 LINE L1 -12 6570 6064 7 1003 806 30 0 20 chrX 54807091 54807193 -111843103 - B1_Mus2 SINE Alu -1 146 47 7 1003 411 156 55 0 chrX 54807215 54807300 -111842996 - L1M4 LINE L1 -292 5832 5744 7 1003 180 0 0 0 chrX 54808220 54808240 -111842056 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 7 1003 270 342 36 9 chrX 54808375 54808487 -111841809 - MIRc SINE MIR -129 139 25 7 1003 279 0 0 0 chrX 54809316 54809347 -111840949 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 1003 26 0 0 0 chrX 54809616 54809642 -111840654 + AT_rich Low_complexity Low_complexity 1 26 0 7 1003 347 299 24 71 chrX 54809987 54810156 -111840140 - MIRb SINE MIR -76 186 26 7 1003 2072 172 21 54 chrX 54810156 54810543 -111839753 + ORR1C1 LTR MaLR 5 378 0 7 1003 282 296 101 47 chrX 54810891 54811040 -111839256 - MIR3 SINE MIR -51 157 1 7 1003 329 323 110 18 chrX 54812299 54812463 -111837833 - MIR SINE MIR -3 259 81 7 1003 3650 38 0 0 chrX 54813849 54814245 -111836051 + MTA_Mm LTR MaLR 1 396 0 7 1003 6084 67 1 13 chrX 54814587 54815332 -111834964 - L1_Mus1 LINE L1 0 6567 5832 7 1003 1183 69 0 0 chrX 54815332 54815477 -111834819 + L1_Mm LINE L1 5436 5580 -303 7 1003 183 302 28 94 chrX 54817667 54817773 -111832523 - L2c LINE L2 -69 3318 3220 7 1003 652 244 84 17 chrX 54818017 54818255 -111832041 + MER2 DNA MER2_type 49 302 -43 7 1003 274 365 36 21 chrX 54818426 54818619 -111831677 - L2c LINE L2 -716 2703 2508 7 1003 331 284 0 0 chrX 54818729 54818796 -111831500 - ID SINE ID -150 74 8 7 1003 247 309 53 0 chrX 54818806 54818900 -111831396 + Helitron2Na_Mam RC Helitron? 223 321 -3 7 1003 193 369 67 19 chrX 54819024 54819129 -111831167 - MIR SINE MIR -83 125 16 7 1003 24 67 0 0 chrX 54819243 54819288 -111831008 + AT_rich Low_complexity Low_complexity 1 45 0 7 1003 1747 227 68 43 chrX 54819652 54820267 -111830029 - Lx8 LINE L1 -1668 5976 5318 7 1003 1630 81 0 5 chrX 54820250 54820474 -111829822 - Lx2 LINE L1 0 6997 6775 7 1003 5934 88 4 11 chrX 54820472 54821299 -111828997 - Lx2 LINE L1 -352 6645 5825 7 1003 577 286 23 66 chrX 54821393 54821696 -111828600 - Lx9 LINE L1 -22 7622 7333 7 1003 24028 25 0 0 chrX 54821697 54825144 -111825152 - L1Md_T LINE L1 0 6582 3136 7 1003 1833 207 3 0 chrX 54825289 54825603 -111824693 + MERVL_2A-int LTR ERVL 4588 4902 -859 7 1003 1158 209 71 113 chrX 54825615 54825952 -111824344 - MT2A LTR ERVL -151 450 1 7 1003 488 276 33 0 chrX 54825972 54826124 -111824172 - L1_Mur3 LINE L1 -2547 3333 3177 7 1003 36384 69 4 14 chrX 54826119 54832277 -111818019 - L1Md_F2 LINE L1 -1 6581 493 7 1003 516 252 185 13 chrX 54832282 54832306 -111817990 - L1M2 LINE L1 -2922 3221 3198 7 1003 5683 62 9 0 chrX 54832306 54832988 -111817308 - L1Md_F2 LINE L1 -1 6581 5894 7 1003 516 252 185 13 chrX 54832988 54833277 -111817019 - L1M2 LINE L1 -2946 3197 2856 7 1003 324 346 62 8 chrX 54833292 54833420 -111816876 - ID_B1 SINE B4 0 224 90 7 1003 955 113 35 0 chrX 54834335 54834477 -111815819 - B1_Mus2 SINE Alu 0 147 1 7 1003 186 118 0 0 chrX 54834479 54834513 -111815783 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 7 1003 236 270 16 0 chrX 54834624 54834687 -111815609 - MIRb SINE MIR -11 257 194 7 1003 1181 55 7 0 chrX 54834836 54834982 -111815314 - B1_Mus1 SINE Alu 0 148 2 7 1003 1196 262 87 34 chrX 54834997 54835353 -111814943 + MTE2a LTR MaLR 5 379 0 7 1003 279 361 83 0 chrX 54835670 54835803 -111814493 - MIRm SINE MIR -124 152 9 7 1003 1966 115 140 3 chrX 54837421 54837786 -111812510 + RLTR9F LTR ERVK 1 415 0 7 1003 209 244 51 32 chrX 54837878 54837958 -111812338 - MIRc SINE MIR -85 177 93 7 1003 293 359 0 0 chrX 54838228 54838320 -111811976 + L2a LINE L2 2669 2760 -659 7 1003 1166 299 83 57 chrX 54838324 54838820 -111811476 - MLT1E3 LTR MaLR -12 612 104 7 1003 308 288 262 17 chrX 54838870 54839103 -111811193 + L2a LINE L2 3137 3426 0 7 1003 193 128 24 49 chrX 54839104 54839145 -111811151 - MIRm SINE MIR -165 111 72 7 1003 283 360 60 11 chrX 54839325 54839544 -111810752 + MLT1C LTR MaLR 261 486 -19 7 1003 355 415 26 5 chrX 54839582 54839771 -111810525 + LTR16A LTR ERVL 12 204 -247 7 1003 414 348 61 69 chrX 54839804 54840188 -111810108 - MLT1E1 LTR MaLR -49 631 114 7 1003 251 362 55 0 chrX 54840277 54840404 -111809892 - MLT1L LTR MaLR -7 603 470 7 1003 1227 215 192 93 chrX 54841013 54841444 -111808852 + MT2A LTR ERVL 1 473 -60 7 1003 213 39 0 0 chrX 54841444 54841470 -111808826 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 7 1003 1227 215 192 93 chrX 54841470 54841521 -111808775 + MT2A LTR ERVL 474 530 -3 7 1003 389 294 62 54 chrX 54841523 54841787 -111808509 - L1ME3B LINE L1 -161 6003 5726 7 1003 278 281 10 0 chrX 54842311 54842407 -111807889 - L1ME2z LINE L1 -7 6437 6341 7 1003 31968 78 5 7 chrX 54842593 54848252 -111802044 - L1Md_F2 LINE L1 -15 6567 935 7 1003 1703 131 0 10 chrX 54848251 54848544 -111801752 - L1VL1 LINE L1 -6131 291 2 7 1003 315 339 28 11 chrX 54848552 54848734 -111801562 - L1ME2z LINE L1 -264 6180 5996 7 1003 295 292 17 39 chrX 54848773 54848951 -111801345 - L1MC4 LINE L1 0 8042 7869 7 1003 316 156 0 59 chrX 54848955 54849023 -111801273 - L1ME2z LINE L1 -485 5959 5896 7 1003 403 310 46 14 chrX 54849723 54850004 -111800292 - L1MD LINE L1 -2385 5610 5321 7 1003 734 307 28 0 chrX 54850021 54850197 -111800099 + B3 SINE B2 2 182 -34 7 1003 599 132 247 40 chrX 54850209 54850240 -111800056 + L1_Mur1 LINE L1 2276 2304 -3582 7 1003 3072 76 0 5 chrX 54850240 54850638 -111799658 + MTA_Mm LTR MaLR 1 396 0 7 1003 599 132 247 40 chrX 54850638 54850756 -111799540 + L1_Mur1 LINE L1 2305 2456 -3430 7 1003 458 271 121 28 chrX 54850756 54850938 -111799358 - ORR1D1 LTR MaLR -23 347 149 7 1003 214 241 0 0 chrX 54850966 54851020 -111799276 + (CAGA)n Simple_repeat Simple_repeat 1 54 0 7 1003 509 134 0 9 chrX 54851021 54851134 -111799162 + (GA)n Simple_repeat Simple_repeat 2 113 0 7 1003 893 243 28 0 chrX 54851134 54851315 -111798981 - ORR1D1 LTR MaLR -188 186 1 7 1003 650 307 0 35 chrX 54851317 54851489 -111798807 - B3 SINE B2 -50 166 1 7 1003 231 36 0 0 chrX 54851505 54851533 -111798763 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1003 36314 30 1 0 chrX 54851615 54858611 -111791685 - L1Md_T LINE L1 0 6585 1 7 1003 249 262 28 9 chrX 54858746 54858854 -111791442 - L1MD LINE L1 -1079 5067 4958 7 1003 4646 38 2 0 chrX 54858911 54859464 -111790832 - L1Md_T LINE L1 0 6582 6029 7 1003 23 54 0 0 chrX 54859470 54859507 -111790789 + AT_rich Low_complexity Low_complexity 1 37 0 7 1003 333 276 82 0 chrX 54859639 54859773 -111790523 - L1M4 LINE L1 -1219 4927 4783 7 1003 234 314 138 31 chrX 54859931 54860256 -111790040 - L1MC LINE L1 -2160 5722 5363 7 1003 343 271 0 0 chrX 54860268 54860338 -111789958 + ID4 SINE ID 13 82 -1 7 1003 315 300 14 0 chrX 54860277 54860347 -111789949 + ID_B1 SINE B4 23 93 -131 7 1003 268 346 0 19 chrX 54860495 54860598 -111789698 + MLT1A1 LTR MaLR 30 130 -278 7 1003 308 304 26 0 chrX 54860722 54860837 -111789459 + CT-rich Low_complexity Low_complexity 2 119 0 7 1003 516 263 17 17 chrX 54860979 54861099 -111789197 - ID_B1 SINE B4 0 224 105 8 1003 411 21 0 0 chrX 54861120 54861168 -111789128 + (TC)n Simple_repeat Simple_repeat 2 49 0 8 1003 623 48 0 12 chrX 54861199 54861283 -111789013 + (GGAGA)n Simple_repeat Simple_repeat 4 86 0 8 1003 441 0 0 0 chrX 54862256 54862305 -111787991 + (TA)n Simple_repeat Simple_repeat 2 50 0 8 1003 183 289 13 0 chrX 54862371 54862447 -111787849 + MIR SINE MIR 137 213 -49 8 1003 290 182 0 0 chrX 54862608 54862686 -111787610 - B1_Mus2 SINE Alu 0 149 72 8 1003 309 258 10 119 chrX 54862798 54862899 -111787397 - MIRm SINE MIR -15 261 172 8 1003 229 349 12 0 chrX 54862980 54863066 -111787230 + L2a LINE L2 3320 3406 -20 8 1003 263 262 18 53 chrX 54863071 54863184 -111787112 + Lx8 LINE L1 7364 7472 -1 8 1003 377 299 18 89 chrX 54863388 54863557 -111786739 - L2c LINE L2 -9 3378 3222 8 1003 382 235 41 0 chrX 54864112 54864210 -111786086 + L1MCa LINE L1 29 130 -6378 8 1003 436 294 40 14 chrX 54864266 54864414 -111785882 + L1MCa LINE L1 259 410 -6098 8 1003 832 322 47 22 chrX 54864595 54864677 -111785619 - B4 SINE B4 -2 290 201 8 1003 189 0 0 0 chrX 54864677 54864698 -111785598 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 8 1003 832 322 47 22 chrX 54864698 54864891 -111785405 - B4 SINE B4 -92 200 8 8 1003 843 258 136 28 chrX 54864908 54865071 -111785225 + L1MCa LINE L1 756 919 -5589 8 1003 603 249 77 95 chrX 54865071 54865293 -111785003 + ID_B1 SINE B4 1 218 -6 8 1003 843 258 136 28 chrX 54865293 54865628 -111784668 + L1MCa LINE L1 920 1307 -5201 8 1003 1173 242 77 120 chrX 54865861 54866536 -111783760 + L1MCa LINE L1 1411 2056 -4452 8 1003 1275 278 14 3 chrX 54866536 54866832 -111783464 - MTE2b LTR MaLR -80 299 1 8 1003 376 262 2 22 chrX 54867100 54867239 -111783057 + L1MA4 LINE L1 5799 5936 -364 8 1003 243 188 78 0 chrX 54867532 54867596 -111782700 + L1M2 LINE L1 2745 2813 -3330 8 1003 661 246 28 0 chrX 54867615 54867794 -111782502 - Lx6 LINE L1 -6 7454 7271 8 1003 1508 263 43 18 chrX 54867822 54868264 -111782032 - Lx6 LINE L1 -854 6606 6154 8 1003 540 0 0 0 chrX 54868444 54868504 -111781792 + (TC)n Simple_repeat Simple_repeat 2 61 0 8 1003 247 207 84 12 chrX 54868706 54868789 -111781507 + Lx8 LINE L1 6966 7054 -419 8 1003 2576 91 5 34 chrX 54868789 54869175 -111781121 + L1_Mus3 LINE L1 6264 6638 0 8 1003 228 67 0 0 chrX 54869208 54869238 -111781058 + (A)n Simple_repeat Simple_repeat 1 30 0 8 1003 293 212 45 0 chrX 54869245 54869311 -111780985 + Lx8 LINE L1 7048 7116 -357 8 1003 186 71 0 0 chrX 54869311 54869339 -111780957 + (CA)n Simple_repeat Simple_repeat 2 29 0 8 1003 432 331 0 8 chrX 54869503 54869625 -111780671 + B4A SINE B4 83 203 -89 8 1003 2059 186 160 74 chrX 54870301 54870852 -111779444 - RMER19B LTR ERVK 0 902 305 8 1003 2743 52 14 3 chrX 54871009 54871358 -111778938 + L1_Mus1 LINE L1 6214 6566 -1 8 1003 1444 262 30 11 chrX 54872269 54872635 -111777661 - MTE2b LTR MaLR 0 379 7 8 1003 23 0 0 0 chrX 54873010 54873033 -111777263 + AT_rich Low_complexity Low_complexity 1 23 0 8 1003 218 311 65 37 chrX 54873357 54873385 -111776911 - RSINE1 SINE B4 -48 117 8 8 1003 372 247 0 25 chrX 54873385 54873464 -111776832 - ID4 SINE ID 0 83 7 8 1003 387 0 0 0 chrX 54874031 54874074 -111776222 + (CTATG)n Simple_repeat Simple_repeat 1 43 0 8 1003 314 318 7 13 chrX 54874152 54874302 -111775994 - L1MD LINE L1 -3484 2662 2514 8 1003 869 172 207 0 chrX 54874414 54874583 -111775713 + B3 SINE B2 1 204 -12 8 1003 5150 121 31 28 chrX 54874626 54875467 -111774829 + L1Md_F2 LINE L1 338 1187 -5429 8 1003 5696 46 0 1 chrX 54875467 54876163 -111774133 + L1Md_F2 LINE L1 5887 6581 -1 8 1003 29744 78 15 2 chrX 54876163 54880509 -111769787 + L1Md_F2 LINE L1 1188 5586 -297 8 1003 7609 68 2 5 chrX 54880510 54881503 -111768793 + L1Md_F2 LINE L1 5588 6577 -5 8 1003 22 35 0 0 chrX 54881503 54881532 -111768764 + AT_rich Low_complexity Low_complexity 1 29 0 8 1003 198 143 0 0 chrX 54881587 54881622 -111768674 + (TATG)n Simple_repeat Simple_repeat 1 35 0 8 1003 343 268 137 30 chrX 54881630 54881761 -111768535 - B3 SINE B2 -3 213 69 8 1003 247 313 59 29 chrX 54881760 54881862 -111768434 + RMER30 DNA MER1_type 69 173 -29 8 1003 514 214 357 0 chrX 54882874 54882901 -111767395 - B3 SINE B2 -7 209 183 8 1003 243 0 0 0 chrX 54882901 54882928 -111767368 + (TATG)n Simple_repeat Simple_repeat 4 30 0 8 1003 514 214 357 0 chrX 54882928 54883054 -111767242 - B3 SINE B2 -34 182 3 8 1003 699 134 0 48 chrX 54883093 54883218 -111767078 - ORR1B2 LTR MaLR 0 367 249 8 1003 235 290 83 31 chrX 54883237 54883333 -111766963 + MIRb SINE MIR 112 212 -56 8 1003 374 265 0 78 chrX 54883442 54883532 -111766764 - RSINE1 SINE B4 -76 89 7 8 1003 325 358 30 0 chrX 54883575 54883709 -111766587 + L1MC LINE L1 4096 4233 -1913 8 1003 688 297 96 72 chrX 54884031 54884376 -111765920 + ORR1E LTR MaLR 7 359 0 8 1003 254 354 10 20 chrX 54884608 54884706 -111765590 + PB1D10 SINE Alu 10 106 -11 8 1003 283 272 94 12 chrX 54885390 54885550 -111764746 - L1MC5 LINE L1 -47 7914 7742 8 1003 1047 47 0 0 chrX 54885590 54885718 -111764578 - B1_Mus1 SINE Alu -1 147 20 8 1003 393 248 70 92 chrX 54885595 54885737 -111764559 - B4A SINE B4 -71 221 83 8 1003 309 51 0 0 chrX 54886396 54886435 -111763861 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 1003 873 312 136 6 chrX 54886558 54886818 -111763478 + MTEa LTR MaLR 1 303 -76 8 1003 633 114 0 0 chrX 54886818 54886932 -111763364 + (CAAG)n Simple_repeat Simple_repeat 1 114 0 8 1003 873 312 136 6 chrX 54886932 54887003 -111763293 + MTEa LTR MaLR 304 374 -5 8 1003 500 246 73 80 chrX 54887198 54887272 -111763024 - RSINE1 SINE B4 -5 160 81 8 1003 866 152 21 241 chrX 54887272 54887558 -111762738 + URR1B DNA MER1_type 1 223 -2 8 1003 500 246 73 80 chrX 54887558 54887620 -111762676 - RSINE1 SINE B4 -85 80 25 8 1003 181 383 85 0 chrX 54889372 54889466 -111760830 - L2b LINE L2 -30 3345 3244 8 1003 760 296 14 29 chrX 54889514 54889723 -111760573 + B3 SINE B2 1 206 -10 8 1003 1553 45 17 0 chrX 54889854 54890031 -111760265 - B2_Mm2 SINE B2 -14 181 2 8 1003 1051 80 0 0 chrX 54891170 54891307 -111758989 - L1_Mus1 LINE L1 0 6567 6431 8 1003 238 173 18 55 chrX 54891711 54891766 -111758530 + B1F SINE Alu 97 149 0 8 1003 281 246 0 17 chrX 54891791 54891849 -111758447 + RSINE1 SINE B4 4 60 -105 8 1003 385 267 30 0 chrX 54891874 54891975 -111758321 + PB1D10 SINE Alu 2 105 -12 8 1003 315 0 0 0 chrX 54891983 54892018 -111758278 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 1003 310 265 145 42 chrX 54892133 54892326 -111757970 + L2c LINE L2 3185 3372 -3 8 1003 242 271 0 103 chrX 54892824 54892902 -111757394 + RSINE1 SINE B4 13 82 -83 8 1003 288 131 29 14 chrX 54892921 54892991 -111757305 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 8 1003 1120 212 132 41 chrX 54894087 54894382 -111755914 - MTEb LTR MaLR 0 379 58 8 1003 340 262 112 24 chrX 54894423 54894548 -111755748 + MIRc SINE MIR 106 241 -27 8 1003 709 191 50 19 chrX 54894832 54894992 -111755304 - Lx9 LINE L1 -136 7508 7344 8 1003 36212 36 0 0 chrX 54895908 54901139 -111749157 + L1Md_T LINE L1 262 5589 -297 8 1003 9590 5 0 0 chrX 54901139 54902135 -111748161 + L1Md_T LINE L1 5590 6585 0 8 1003 691 258 99 9 chrX 54902396 54902619 -111747677 - Lx8 LINE L1 -2 7471 7229 8 1003 611 88 11 0 chrX 54903808 54903899 -111746397 + (TC)n Simple_repeat Simple_repeat 1 92 0 8 1003 833 292 142 68 chrX 54905268 54905914 -111744382 + L1MB8 LINE L1 5299 5992 -186 8 1003 446 238 0 0 chrX 54905947 54906048 -111744248 + L1MB8 LINE L1 6077 6177 -1 8 1003 207 321 98 13 chrX 54906548 54906700 -111743596 + MIRb SINE MIR 42 209 -59 8 1003 688 308 88 50 chrX 54906799 54907207 -111743089 + MLT1L LTR MaLR 71 600 -10 8 1003 922 239 22 6 chrX 54907372 54907553 -111742743 + ID_B1 SINE B4 18 201 -23 8 1003 333 0 0 0 chrX 54907701 54907738 -111742558 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 1003 360 0 0 0 chrX 54907738 54907777 -111742519 + (GA)n Simple_repeat Simple_repeat 1 40 0 8 1003 191 365 42 0 chrX 54907856 54907874 -111742422 - L2 LINE L2 -907 2512 2495 8 1003 1123 271 105 12 chrX 54907874 54908199 -111742097 + ORR1E LTR MaLR 5 359 0 8 1003 191 365 42 0 chrX 54908199 54908276 -111742020 - L2 LINE L2 -925 2494 2414 8 1003 1119 373 31 44 chrX 54909590 54910342 -111739954 + L2 LINE L2 2203 2944 -475 8 1003 477 291 182 42 chrX 54910700 54910944 -111739352 - Lx8 LINE L1 -17 7456 7173 8 1003 675 25 0 0 chrX 54910944 54911025 -111739271 + (TC)n Simple_repeat Simple_repeat 1 81 0 8 1003 315 0 0 0 chrX 54911025 54911059 -111739237 + (CA)n Simple_repeat Simple_repeat 1 35 0 8 1003 477 291 182 42 chrX 54911059 54911121 -111739175 - Lx8 LINE L1 -301 7172 7107 8 1003 1783 255 79 54 chrX 54911182 54911791 -111738505 - Lx8 LINE L1 -458 7015 6392 8 1003 537 274 17 0 chrX 54911795 54911912 -111738384 - PB1D7 SINE Alu -1 119 1 8 1003 465 50 0 0 chrX 54911958 54912018 -111738278 + (CA)n Simple_repeat Simple_repeat 2 61 0 8 1003 594 308 77 68 chrX 54912029 54912353 -111737943 - MLT2C1 LTR ERVL -68 329 3 8 1003 1759 21 0 0 chrX 54912562 54912749 -111737547 + B2_Mm1a SINE B2 1 187 -6 8 1003 390 42 0 0 chrX 54913167 54913215 -111737081 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 1003 564 56 0 0 chrX 54914865 54914937 -111735359 + (TG)n Simple_repeat Simple_repeat 1 72 0 8 1003 1850 225 49 27 chrX 54914967 54915479 -111734817 - RLTR11A2 LTR ERVK 0 527 5 8 1003 582 214 143 14 chrX 54915503 54915650 -111734646 - B4A SINE B4 -119 173 8 8 1003 653 288 102 12 chrX 54916641 54916887 -111733409 + Tigger16a DNA Tigger 398 665 -268 8 1003 541 319 77 95 chrX 54917352 54917449 -111732847 - MLT1D LTR MaLR -108 397 299 8 1003 947 232 23 28 chrX 54917449 54917666 -111732630 - ID_B1 SINE B4 -6 218 3 8 1003 541 319 77 95 chrX 54917666 54917959 -111732337 - MLT1D LTR MaLR -207 298 14 8 1003 273 29 0 0 chrX 54917959 54917993 -111732303 + (CA)n Simple_repeat Simple_repeat 2 35 0 8 1003 414 276 134 0 chrX 54917994 54918211 -111732085 - L1MD3 LINE L1 -20 7975 7730 8 1003 365 348 111 50 chrX 54918382 54919113 -111731183 - L2a LINE L2 -34 3392 2627 8 125 360 339 189 28 chrX 54919145 54919536 -111730760 - L2a LINE L2 -2560 859 406 8 1004 420 264 97 46 chrX 54919803 54919998 -111730298 + MamRep605 Unknown Unknown 578 782 -94 8 1004 205 167 0 0 chrX 54920421 54920457 -111729839 + CT-rich Low_complexity Low_complexity 1 36 0 8 1004 363 136 0 0 chrX 54920481 54920540 -111729756 + (TC)n Simple_repeat Simple_repeat 1 59 0 9 1004 180 111 0 0 chrX 54920540 54920567 -111729729 + (TG)n Simple_repeat Simple_repeat 2 28 0 9 1004 414 310 35 26 chrX 54920607 54920723 -111729573 + B1F SINE Alu 4 120 -29 9 1004 497 293 163 22 chrX 54920940 54921227 -111729069 + MER58B DNA MER1_type 1 326 -15 9 1004 294 258 15 0 chrX 54921352 54921418 -111728878 + ID SINE ID 6 72 -152 9 1004 249 338 30 103 chrX 54921425 54921590 -111728706 - MLT1J LTR MaLR -131 381 229 9 1004 266 308 0 18 chrX 54921779 54921888 -111728408 - Lx7 LINE L1 -12 7684 7578 9 1004 402 21 0 0 chrX 54921981 54922028 -111728268 + (GA)n Simple_repeat Simple_repeat 2 48 0 9 1004 365 262 179 29 chrX 54922290 54922463 -111727833 - MER63A DNA AcHobo -11 199 1 9 1004 690 272 0 93 chrX 54922550 54922797 -111727499 + Lx8 LINE L1 7250 7473 0 9 1004 578 263 156 73 chrX 54922887 54923215 -111727081 - ORR1E LTR MaLR -2 357 3 9 1004 29 0 0 0 chrX 54923447 54923476 -111726820 + AT_rich Low_complexity Low_complexity 1 29 0 9 1004 4281 60 4 4 chrX 54923696 54924210 -111726086 + L1_Mus3 LINE L1 6110 6623 -15 9 1004 414 0 0 0 chrX 54924227 54924273 -111726023 + (TC)n Simple_repeat Simple_repeat 1 46 0 9 1004 414 0 0 0 chrX 54924273 54924318 -111725978 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 1004 467 326 139 48 chrX 54924392 54924643 -111725653 + MLT1N2 LTR MaLR 27 300 -262 9 1004 533 287 10 19 chrX 54925586 54925792 -111724504 + L1MC4a LINE L1 6391 6594 -1288 9 1004 364 286 155 25 chrX 54925804 54926120 -111724176 + L1MC4a LINE L1 6716 7072 -970 9 1004 414 277 42 21 chrX 54926217 54926361 -111723935 + B1F SINE Alu 1 147 -2 9 1004 1741 139 71 10 chrX 54926438 54926735 -111723561 - ORR1B1 LTR MaLR -79 315 1 9 1004 1237 221 89 7 chrX 54927093 54927362 -111722934 + MTE2b LTR MaLR 19 309 -70 9 1004 180 0 0 0 chrX 54927466 54927486 -111722810 + (TTTG)n Simple_repeat Simple_repeat 4 23 0 9 1004 363 312 200 9 chrX 54927913 54928123 -111722173 + L2b LINE L2 3117 3366 -9 9 1004 360 364 8 0 chrX 54928442 54928560 -111721736 - L2b LINE L2 -1 3374 3256 9 1004 522 0 0 0 chrX 54928893 54928951 -111721345 + (GGA)n Simple_repeat Simple_repeat 1 58 0 9 1004 223 255 260 62 chrX 54929080 54929226 -111721070 + MIR SINE MIR 63 237 -25 9 1004 189 244 69 109 chrX 54929646 54929747 -111720549 + MIRb SINE MIR 24 120 -148 9 1004 276 300 12 0 chrX 54929777 54929857 -111720439 + (CATA)n Simple_repeat Simple_repeat 2 82 0 9 1004 1690 200 91 30 chrX 54931317 54931714 -111718582 + MTC LTR MaLR 1 421 0 9 1004 427 307 42 35 chrX 54931991 54932133 -111718163 - MLT1J2 LTR MaLR -301 147 5 9 1004 234 300 48 36 chrX 54932408 54932491 -111717805 + MIRm SINE MIR 166 249 -27 9 1004 225 414 23 0 chrX 54932638 54932766 -111717530 - MIR SINE MIR -73 189 59 9 1004 268 309 96 38 chrX 54933356 54933565 -111716731 + L2 LINE L2 2191 2411 -1008 9 1004 565 280 117 23 chrX 54933907 54934163 -111716133 + L1MC3 LINE L1 6533 6812 -973 9 1004 323 320 101 13 chrX 54934241 54934390 -111715906 - RMER15 LTR ERVL -1 574 413 9 1004 259 299 11 0 chrX 54935070 54935157 -111715139 + L1MD3 LINE L1 7890 7977 -18 9 1004 7317 72 3 5 chrX 54935151 54936092 -111714204 + L1_Mus4 LINE L1 5692 6630 -6 9 1004 543 69 0 0 chrX 54936477 54936549 -111713747 + (TTCC)n Simple_repeat Simple_repeat 2 73 0 9 1004 482 318 0 15 chrX 54936563 54936694 -111713602 - ID_B1 SINE B4 0 224 96 9 1004 351 252 41 82 chrX 54936912 54937059 -111713237 - MER5B DNA MER1_type -35 143 3 9 1004 316 34 9 0 chrX 54937073 54937113 -111713183 - L1Md_F2 LINE L1 -404 6178 6136 9 1004 3592 25 5 2 chrX 54937114 54937511 -111712785 + L1Md_F2 LINE L1 6183 6580 -2 9 1004 351 0 0 0 chrX 54937898 54937937 -111712359 + (TG)n Simple_repeat Simple_repeat 1 39 0 9 1004 266 278 57 80 chrX 54938038 54938214 -111712082 + L1MA5A LINE L1 5760 5931 -366 9 1004 281 294 122 34 chrX 54938441 54938645 -111711651 - Lx8 LINE L1 0 7473 7252 9 1004 1162 89 6 0 chrX 54938645 54938803 -111711493 + B2_Mm2 SINE B2 1 159 -36 9 1004 198 0 0 0 chrX 54938804 54938826 -111711470 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 9 1004 429 274 57 36 chrX 54938840 54938980 -111711316 - Lx8 LINE L1 -208 7265 7123 9 1004 286 122 0 0 chrX 54939098 54939147 -111711149 + RCHARR1 DNA MER1_type 773 821 -153 9 1004 242 196 22 0 chrX 54939279 54939325 -111710971 - RMER1C Other Other -146 1196 1150 9 1004 1663 240 92 124 chrX 54939407 54940029 -111710267 - Lx8 LINE L1 -173 7300 6699 9 1004 226 364 16 25 chrX 54940113 54940234 -111710062 + Lx8 LINE L1 7181 7300 -173 9 1004 702 276 35 23 chrX 54940272 54940532 -111709764 - L1MA7 LINE L1 -454 5837 5575 9 1004 682 301 92 35 chrX 54940525 54940863 -111709433 + L1MA7 LINE L1 5864 6220 -71 9 1004 226 338 0 127 chrX 54940886 54941052 -111709244 - B3A SINE B2 -5 193 49 9 1004 222 356 19 47 chrX 54940972 54941078 -111709218 - B4A SINE B4 -163 129 27 9 1004 2200 208 62 4 chrX 54941099 54941567 -111708729 + Lx2B LINE L1 6506 7000 0 9 1004 2967 87 5 10 chrX 54941604 54942000 -111708296 - L1_Mus4 LINE L1 -2 6634 6241 9 1004 627 244 53 6 chrX 54942078 54942247 -111708049 - Lx5 LINE L1 -946 6104 5928 9 1004 2355 147 46 14 chrX 54942247 54942660 -111707636 - Lx5 LINE L1 -237 5640 5215 9 1004 2818 218 18 2 chrX 54942657 54943167 -111707129 + Lx5 LINE L1 6487 7004 -46 9 1004 256 289 131 28 chrX 54944629 54944736 -111705560 - MIR3 SINE MIR -25 183 66 9 1004 525 80 0 0 chrX 54945033 54945108 -111705188 + (CA)n Simple_repeat Simple_repeat 1 75 0 9 1004 233 294 0 0 chrX 54945119 54945170 -111705126 - MLT1A0 LTR MaLR -74 291 241 9 1004 711 356 85 24 chrX 54946489 54946901 -111703395 + MLT1J2 LTR MaLR 9 445 -3 9 1004 183 42 0 0 chrX 54947141 54947165 -111703131 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 1004 227 236 0 18 chrX 54947444 54947500 -111702796 + MIRc SINE MIR 189 243 -25 9 1004 207 0 0 0 chrX 54947804 54947827 -111702469 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 9 1004 437 300 215 29 chrX 54948074 54948386 -111701910 - Tigger7 DNA MER2_type -6 2485 2116 9 1004 615 217 71 14 chrX 54948739 54948879 -111701417 - B1_Mur2 SINE Alu -1 148 1 9 1004 206 284 66 26 chrX 54948945 54949021 -111701275 + L2c LINE L2 1441 1519 -1900 9 1004 334 264 56 40 chrX 54949246 54949372 -111700924 + MER34 LTR ERV1 344 471 -71 9 1004 254 300 35 26 chrX 54949449 54949562 -111700734 - PB1D7 SINE Alu -3 117 4 9 1004 271 211 197 0 chrX 54949602 54949678 -111700618 + MIRb SINE MIR 40 133 -135 9 1004 674 336 23 5 chrX 54949879 54950100 -111700196 + MLT1A0 LTR MaLR 125 349 -16 9 1004 259 391 88 16 chrX 54950164 54950346 -111699950 + L2c LINE L2 2702 2896 -523 9 1004 290 317 157 43 chrX 54950418 54950698 -111699598 + L2c LINE L2 3075 3386 -1 9 1004 932 173 196 0 chrX 54950936 54951115 -111699181 - B3 SINE B2 -1 215 2 9 1004 2391 232 85 11 chrX 54951320 54951931 -111698365 - RCHARR1 DNA MER1_type -316 658 3 9 1004 906 57 0 0 chrX 54952052 54952176 -111698120 - L1Md_F2 LINE L1 -12 6570 6447 9 1004 855 164 179 5 chrX 54953349 54953539 -111696757 + URR1A DNA MER1_type 3 225 -1 9 1004 471 35 0 0 chrX 54953828 54953885 -111696411 + (TC)n Simple_repeat Simple_repeat 2 58 0 9 1004 429 20 0 0 chrX 54953895 54953945 -111696351 + (GA)n Simple_repeat Simple_repeat 1 50 0 9 1004 874 280 104 8 chrX 54953962 54954203 -111696093 - B4A SINE B4 -10 282 19 9 1004 246 206 0 0 chrX 54954818 54954881 -111695415 + CT-rich Low_complexity Low_complexity 2 64 0 9 1004 693 287 77 0 chrX 54954896 54955094 -111695202 - B3 SINE B2 -3 213 1 9 1004 321 194 0 43 chrX 54955084 54955154 -111695142 - URR1B DNA MER1_type 0 225 159 9 1004 324 48 0 0 chrX 54955196 54955238 -111695058 + (CTTA)n Simple_repeat Simple_repeat 2 43 0 9 1004 430 259 85 35 chrX 54955837 54956097 -111694199 - L1MA5 LINE L1 -1 6299 6027 9 1004 24 32 0 0 chrX 54956317 54956348 -111693948 + AT_rich Low_complexity Low_complexity 1 31 0 9 1004 252 313 15 0 chrX 54956729 54956796 -111693500 + ID4_ SINE ID 2 69 -14 9 1004 21 36 0 0 chrX 54957025 54957053 -111693243 + AT_rich Low_complexity Low_complexity 1 28 0 9 1004 1132 77 0 0 chrX 54957265 54957408 -111692888 - B1_Mus2 SINE Alu 0 147 5 9 1004 355 326 38 30 chrX 54957462 54957595 -111692701 - ID_B1 SINE B4 -7 217 84 9 1004 3502 178 134 12 chrX 54957692 54958424 -111691872 - RMER13A LTR ERVK -37 823 3 9 1004 277 296 10 39 chrX 54958552 54958654 -111691642 + MLT1B LTR MaLR 13 111 -279 9 1004 1200 27 0 26 chrX 54958655 54958806 -111691490 + B1_Mus2 SINE Alu 1 147 0 9 1004 434 115 64 0 chrX 54958857 54958935 -111691361 + Lx2A LINE L1 6921 7003 -5 9 1004 841 234 70 35 chrX 54958960 54959159 -111691137 + B3 SINE B2 11 216 0 9 1004 260 367 16 24 chrX 54959160 54959283 -111691013 + MLT1B LTR MaLR 98 219 -171 9 1004 1255 180 19 5 chrX 54959695 54959907 -111690389 - B3 SINE B2 -1 215 1 9 1004 211 317 241 16 chrX 54960050 54960303 -111689993 + L2 LINE L2 2757 3066 -353 9 1004 4873 70 5 11 chrX 54966191 54966845 -111683451 - L1_Mus3 LINE L1 -4 6634 5985 9 1004 453 239 119 63 chrX 54967392 54967535 -111682761 - MER5A1 DNA MER1_type -4 162 12 9 1004 530 347 33 23 chrX 54968145 54968452 -111681844 - Lx8 LINE L1 -9 7464 7155 9 1004 2951 189 12 0 chrX 54968726 54969298 -111680998 - Lx9 LINE L1 -187 7457 6879 9 1004 495 48 0 0 chrX 54969320 54969382 -111680914 + (TA)n Simple_repeat Simple_repeat 1 62 0 9 1004 953 206 99 40 chrX 54969382 54969705 -111680591 - L1M2 LINE L1 -1522 4621 4280 9 1004 342 0 0 0 chrX 54969932 54969970 -111680326 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1004 34845 65 3 6 chrX 54970065 54976252 -111674044 - L1Md_T LINE L1 0 6582 414 1 1004 250 87 0 0 chrX 54976260 54976306 -111673990 - Lx2B LINE L1 -4 6996 6951 1 1004 21 0 0 0 chrX 54976347 54976368 -111673928 + AT_rich Low_complexity Low_complexity 1 21 0 1 1004 207 310 0 0 chrX 54976644 54976702 -111673594 + CT-rich Low_complexity Low_complexity 1 58 0 1 1004 213 394 48 9 chrX 54976777 54976882 -111673414 + RSINE1 SINE B4 3 111 -54 1 1004 777 11 0 0 chrX 54976886 54976976 -111673320 + (TC)n Simple_repeat Simple_repeat 1 90 0 1 1004 231 36 0 0 chrX 54976976 54977003 -111673293 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1004 256 326 50 50 chrX 54977016 54977116 -111673180 - B1_Mur3 SINE Alu -47 100 1 1 1004 505 327 58 37 chrX 54977121 54977721 -111672575 + L1MC4 LINE L1 6778 7390 -652 1 1004 516 260 0 39 chrX 54977792 54977920 -111672376 + ID_B1 SINE B4 90 212 -12 1 1004 315 0 0 0 chrX 54977920 54977955 -111672341 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 1 1004 567 255 14 14 chrX 54978060 54978207 -111672089 + B1F SINE Alu 1 147 -2 1 1004 366 335 21 33 chrX 54978342 54978529 -111671767 + L1MC4 LINE L1 7632 7921 -121 1 1004 249 108 0 0 chrX 54978529 54978566 -111671730 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 1004 366 340 79 59 chrX 54978566 54978670 -111671626 + L1MC4 LINE L1 7922 8036 -6 1 1004 214 280 151 62 chrX 54979701 54979880 -111670416 - L2c LINE L2 -11 3376 3182 1 1004 195 42 0 0 chrX 54980335 54980359 -111669937 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1004 460 272 52 17 chrX 54980601 54980717 -111669579 + PB1 SINE Alu 1 120 -7 1 1004 774 286 122 60 chrX 54980763 54981477 -111668819 + L1ME1 LINE L1 3951 4708 -1438 1 1004 450 316 39 26 chrX 54981561 54981701 -111668595 + RSINE1 SINE B4 8 149 -16 1 1004 486 0 0 0 chrX 54981701 54981755 -111668541 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 1004 450 316 39 26 chrX 54981755 54981770 -111668526 + RSINE1 SINE B4 150 164 -1 1 1004 234 324 61 8 chrX 54981934 54982180 -111668116 + L1ME1 LINE L1 4935 5193 -953 1 1004 5224 104 2 2 chrX 54982191 54983195 -111667101 - L1_Mus3 LINE L1 -559 6079 5076 1 1004 3706 104 9 2 chrX 54983195 54983735 -111666561 + L1_Mus3 LINE L1 6088 6631 -7 1 1004 3542 68 21 4 chrX 54983734 54984204 -111666092 + L1Md_F2 LINE L1 6105 6582 0 1 1004 311 89 18 0 chrX 54984211 54984267 -111666029 + (TAAAAA)n Simple_repeat Simple_repeat 4 60 0 1 1004 268 345 99 0 chrX 54984541 54984773 -111665523 + L1ME1 LINE L1 5402 5656 -523 1 1004 16710 98 12 25 chrX 54984884 54987121 -111663175 - L1_Mus3 LINE L1 -6 6632 4439 1 1004 1232 41 0 0 chrX 54987121 54987266 -111663030 - B1_Mm SINE Alu -2 145 1 1 1004 16710 118 9 45 chrX 54987266 54988730 -111661566 - L1_Mus3 LINE L1 -1445 4438 3025 1 1004 617 306 72 15 chrX 54988832 54989233 -111661063 + L1ME1 LINE L1 5756 6179 0 1 1004 318 313 25 57 chrX 54989233 54989355 -111660941 + L1MEd LINE L1 1088 1205 -4914 1 1004 615 226 41 41 chrX 54991811 54992055 -111658241 - Lx7 LINE L1 -6 7690 7447 1 1004 409 288 64 26 chrX 54992316 54992504 -111657792 + MER104 DNA Tc2 4 179 -2 1 1004 2124 90 35 16 chrX 54992909 54993225 -111657071 + L1_Mus2 LINE L1 6222 6543 -23 1 1004 4373 94 4 50 chrX 54993229 54993904 -111656392 + L1_Mus3 LINE L1 5985 6628 -10 1 1004 6701 51 1 8 chrX 54994181 54995030 -111655266 + L1Md_F2 LINE L1 5727 6569 -13 1 1004 1043 16 8 0 chrX 54995102 54995227 -111655069 + (GAAA)n Simple_repeat Simple_repeat 3 128 0 1 1004 581 218 52 15 chrX 54995229 54995364 -111654932 + B1F SINE Alu 10 149 0 1 1004 284 271 159 32 chrX 54996101 54996227 -111654069 - MLT1L LTR MaLR -69 541 400 1 1004 28 0 0 0 chrX 54996303 54996331 -111653965 + AT_rich Low_complexity Low_complexity 1 28 0 1 1004 496 308 8 0 chrX 54996373 54996493 -111653803 - RSINE1 SINE B4 -27 138 18 1 1004 687 309 122 4 chrX 54996605 54997112 -111653184 - L1MA5 LINE L1 -2 6298 5732 1 1004 295 219 94 0 chrX 54997262 54997326 -111652970 + PB1D10 SINE Alu 47 116 -1 1 1004 456 111 0 0 chrX 54997747 54997828 -111652468 + (TC)n Simple_repeat Simple_repeat 2 82 0 1 1004 244 296 0 0 chrX 54997908 54997989 -111652307 + CT-rich Low_complexity Low_complexity 2 82 0 1 1004 276 77 0 0 chrX 54998022 54998061 -111652235 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 1 1004 899 274 89 19 chrX 54998061 54998318 -111651978 - B4A SINE B4 -10 282 8 1 1004 809 237 25 17 chrX 54998567 54998803 -111651493 + Lx2B LINE L1 6745 6982 -18 1 1004 180 172 67 33 chrX 54999279 54999339 -111650957 + L3 LINE CR1 3339 3400 -1089 1 1004 727 218 9 11 chrX 54999532 54999710 -111650586 - B3 SINE B2 -15 178 2 1 1004 182 37 0 36 chrX 55000000 55000028 -111650268 + (TTA)n Simple_repeat Simple_repeat 1 27 0 1 1004 21 82 0 0 chrX 55000058 55000107 -111650189 + AT_rich Low_complexity Low_complexity 1 49 0 2 1004 211 302 16 0 chrX 55000381 55000444 -111649852 + B1_Mur2 SINE Alu 75 138 -11 3 1004 504 308 64 0 chrX 55001066 55001222 -111649074 - ID_B1 SINE B4 -10 214 49 4 1004 222 312 18 84 chrX 55001227 55001339 -111648957 - MIRm SINE MIR -132 130 31 5 1004 311 238 24 59 chrX 55001343 55001428 -111648868 - PB1D10 SINE Alu 0 117 36 6 1004 232 271 85 0 chrX 55001802 55001861 -111648435 + ID SINE ID 8 71 -153 7 1004 362 289 67 0 chrX 55001886 55001976 -111648320 + ID_B1 SINE B4 118 213 -11 7 1004 311 263 40 0 chrX 55001909 55001985 -111648311 + B1F SINE Alu 69 147 -2 8 1004 497 322 62 14 chrX 55002033 55002241 -111648055 + MLT2C1 LTR ERVL 15 232 -165 9 1004 243 0 0 0 chrX 55002291 55002318 -111647978 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1004 390 296 0 0 chrX 55002332 55002440 -111647856 - L1MA4A LINE L1 -367 5936 5829 1 1004 785 280 95 8 chrX 55002509 55002908 -111647388 + L1MC1 LINE L1 5892 6325 -8 1 1004 1439 39 66 0 chrX 55003075 55003235 -111647061 + B2_Mm1a SINE B2 1 160 -33 1 1004 267 79 0 0 chrX 55003235 55003273 -111647023 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 1 1004 1439 39 66 0 chrX 55003273 55003293 -111647003 + B2_Mm1a SINE B2 161 191 -2 1 1004 832 309 122 57 chrX 55003312 55004643 -111645653 + L1MC3 LINE L1 6324 7741 -44 1 1004 763 239 29 55 chrX 55004666 55004940 -111645356 + L1M4 LINE L1 5322 5588 -590 1 1004 708 12 0 0 chrX 55004945 55005026 -111645270 + (GAAA)n Simple_repeat Simple_repeat 3 83 0 1 1004 197 326 21 43 chrX 55005223 55005316 -111644980 - L2 LINE L2 -905 2514 2424 1 1004 634 201 25 25 chrX 55005445 55005577 -111644719 + B1_Mur2 SINE Alu 15 149 0 1 1004 463 202 8 8 chrX 55005605 55005725 -111644571 + (CATA)n Simple_repeat Simple_repeat 3 122 0 2 1004 1660 16 0 0 chrX 55005965 55006150 -111644146 - B2_Mm1a SINE B2 -7 186 2 2 1004 22 0 0 0 chrX 55006214 55006236 -111644060 + AT_rich Low_complexity Low_complexity 1 22 0 2 1004 315 0 0 0 chrX 55006858 55006893 -111643403 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1004 7299 77 1 14 chrX 55007294 55009092 -111641204 + L1_Mus2 LINE L1 4794 6566 0 2 1004 12179 105 29 17 chrX 55009494 55010271 -111640025 + Lx3C LINE L1 3854 4630 -1256 2 1004 195 69 0 0 chrX 55010271 55010300 -111639996 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 1004 12179 121 43 12 chrX 55010300 55012553 -111637743 + Lx3C LINE L1 4631 6971 -5 2 1004 265 236 55 14 chrX 55013189 55013262 -111637034 - Charlie5 DNA MER1_type -2519 105 30 2 1004 999 138 102 10 chrX 55013262 55013459 -111636837 - Lx3C LINE L1 -81 6895 6681 2 1004 365 287 30 80 chrX 55014028 55014221 -111636075 - MER5A DNA MER1_type -2 187 9 2 1004 328 317 41 27 chrX 55014554 55014700 -111635596 + LTR78 LTR ERV1 254 401 -903 3 1004 527 337 70 67 chrX 55014756 55015026 -111635270 + LTR78 LTR ERV1 672 942 -362 3 1004 255 226 92 35 chrX 55015077 55015164 -111635132 - MER53 DNA hAT -85 108 17 3 1004 322 363 108 14 chrX 55015603 55015880 -111634416 - L1ME4a LINE L1 -224 5900 5598 3 1004 1248 162 93 20 chrX 55016591 55016837 -111633459 - RLTR25A LTR ERVK 0 1103 840 3 1004 2052 141 11 37 chrX 55016837 55017213 -111633083 + Lx3C LINE L1 6169 6534 -442 3 1004 885 243 81 4 chrX 55017195 55017468 -111632828 + Lx3C LINE L1 6681 6974 -2 3 1004 4615 117 34 15 chrX 55017478 55018207 -111632089 - RLTR25A LTR ERVK -250 853 111 3 1004 21 0 0 0 chrX 55021000 55021021 -111629275 + AT_rich Low_complexity Low_complexity 1 21 0 3 1004 219 36 0 0 chrX 55023227 55023255 -111627041 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 3 1004 243 0 0 0 chrX 55023420 55023447 -111626849 + (GA)n Simple_repeat Simple_repeat 1 27 0 3 1004 868 37 0 63 chrX 55024482 55024625 -111625671 + L1Md_F2 LINE L1 6448 6581 -1 3 1004 6579 89 1 5 chrX 55025139 55026035 -111624261 - Lx2 LINE L1 -1 6996 6104 4 1004 1149 69 14 0 chrX 55026539 55026684 -111623612 - B1_Mus1 SINE Alu 0 148 2 4 1004 242 364 35 26 chrX 55026813 55026857 -111623439 + L2b LINE L2 3252 3296 -79 4 1004 3400 100 0 2 chrX 55026857 55027330 -111622966 - L1_Mus4 LINE L1 -4 6632 6161 4 1004 242 364 35 26 chrX 55027330 55027398 -111622898 + L2b LINE L2 3297 3365 -10 4 1004 889 57 8 8 chrX 55027939 55028064 -111622232 + (TTTC)n Simple_repeat Simple_repeat 3 127 0 4 1004 843 139 8 0 chrX 55028205 55028334 -111621962 + B3 SINE B2 1 130 -86 4 1004 254 334 51 44 chrX 55028538 55028754 -111621542 + MIR SINE MIR 45 254 -8 4 1004 216 0 0 0 chrX 55029226 55029250 -111621046 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1004 207 0 0 0 chrX 55029460 55029483 -111620813 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 4 1004 1202 54 0 7 chrX 55029571 55029720 -111620576 - B1_Mus1 SINE Alu 0 148 1 4 1004 315 265 163 0 chrX 55029725 55029823 -111620473 - B1F SINE Alu -21 128 15 5 1004 492 290 72 95 chrX 55029869 55030090 -111620206 - ID_B1 SINE B4 -6 218 3 5 1004 189 356 14 35 chrX 55030685 55030894 -111619402 + MIRb SINE MIR 14 249 -19 5 1004 452 169 0 8 chrX 55031288 55031419 -111618877 + CT-rich Low_complexity Low_complexity 1 130 0 5 1004 219 320 14 70 chrX 55031741 55031846 -111618450 + L2b LINE L2 3263 3390 -36 5 1004 225 65 0 0 chrX 55031994 55032025 -111618271 + (CAAAAA)n Simple_repeat Simple_repeat 5 35 0 5 1004 3882 71 16 4 chrX 55032798 55033310 -111616986 + L1_Mus2 LINE L1 6049 6566 0 5 1004 550 290 7 14 chrX 55033944 55034084 -111616212 + Tigger12c DNA MER2_type 1 139 -595 5 1004 210 329 164 0 chrX 55034506 55034579 -111615717 + MIR3 SINE MIR 73 157 -51 5 1004 236 300 29 0 chrX 55034843 55034913 -111615383 - ID2 SINE ID -10 73 2 5 1004 267 79 0 0 chrX 55034977 55035015 -111615281 + (TTA)n Simple_repeat Simple_repeat 2 39 0 6 1004 506 237 15 0 chrX 55035307 55035442 -111614854 + L1MA6 LINE L1 5828 5964 -336 6 1004 452 239 135 14 chrX 55035498 55035787 -111614509 + L1MA6 LINE L1 5962 6285 -6 6 1004 216 350 132 45 chrX 55035856 55036122 -111614174 - L2c LINE L2 -22 3365 3077 6 1004 741 272 81 63 chrX 55036725 55037076 -111613220 - MLT1F2 LTR MaLR -61 566 273 6 1004 279 0 0 0 chrX 55038819 55038850 -111611446 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 1004 746 269 20 36 chrX 55041920 55042167 -111608129 - L1M2 LINE L1 -544 5747 5505 6 1004 367 354 78 68 chrX 55042339 55042764 -111607532 + L2a LINE L2 2987 3415 -11 6 1004 30 0 0 0 chrX 55043080 55043110 -111607186 + AT_rich Low_complexity Low_complexity 1 30 0 6 1004 482 103 13 0 chrX 55043328 55043406 -111606890 + (CA)n Simple_repeat Simple_repeat 1 79 0 6 1004 1033 254 86 10 chrX 55043406 55043708 -111606588 - Lx7 LINE L1 -388 7308 6984 6 1004 967 141 0 22 chrX 55043737 55043866 -111606430 + polypurine Low_complexity Low_complexity 3 128 0 7 1004 1287 44 0 32 chrX 55043866 55044052 -111606244 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 7 1004 967 141 0 22 chrX 55044052 55044104 -111606192 + polypurine Low_complexity Low_complexity 129 180 0 7 1004 1205 56 0 37 chrX 55044106 55044293 -111606003 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 7 1004 342 0 0 0 chrX 55044293 55044331 -111605965 + (GGAA)n Simple_repeat Simple_repeat 1 38 0 7 1004 369 0 0 0 chrX 55044439 55044480 -111605816 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1004 189 0 0 0 chrX 55045109 55045130 -111605166 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1004 259 284 98 103 chrX 55045598 55045802 -111604494 - MIRc SINE MIR -35 233 31 7 1004 599 282 5 0 chrX 55046335 55046530 -111603766 + L1MB5 LINE L1 4489 4684 -1462 7 1004 243 0 0 0 chrX 55046531 55046558 -111603738 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 7 1004 352 167 0 106 chrX 55046574 55046668 -111603628 + L1Md_F3 LINE L1 6359 6442 -142 8 1004 314 43 0 21 chrX 55046668 55046715 -111603581 + B1_Mm SINE Alu 102 147 0 8 1004 888 38 0 50 chrX 55046771 55046911 -111603385 + L1Md_F3 LINE L1 6452 6584 0 8 1004 443 211 3 86 chrX 55046913 55047020 -111603276 + B1_Mur4 SINE Alu 42 141 -6 8 1004 227 225 0 14 chrX 55047022 55047094 -111603202 + GA-rich Low_complexity Low_complexity 2 72 0 8 1004 402 21 0 0 chrX 55047097 55047144 -111603152 + (GGGA)n Simple_repeat Simple_repeat 4 50 0 8 1004 375 266 14 41 chrX 55047150 55047295 -111603001 + L1MB5 LINE L1 4776 4916 -1230 7 1004 987 312 81 34 chrX 55047356 55048000 -111602296 + L1MB5 LINE L1 5484 6157 -17 7 1004 1120 88 0 7 chrX 55048502 55048651 -111601645 - B1_Mus1 SINE Alu 0 148 1 8 1004 351 44 0 0 chrX 55049625 55049670 -111600626 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 8 1004 299 239 0 0 chrX 55049740 55049807 -111600489 + ORR1D2 LTR MaLR 297 363 -7 8 1004 2763 56 99 0 chrX 55049808 55050202 -111600094 - L1_Mm LINE L1 -173 5710 5278 8 125 637 22 11 0 chrX 55050202 55050291 -111600005 - L1Md_F2 LINE L1 -13 6569 6480 8 1005 678 261 47 4 chrX 55050629 55050836 -111599460 + B3A SINE B2 3 216 0 9 1005 264 308 66 33 chrX 55051464 55051585 -111598711 - MIRc SINE MIR -119 149 25 9 1005 273 290 29 95 chrX 55052677 55052814 -111597482 + MIRb SINE MIR 1 128 -140 9 1005 198 282 14 27 chrX 55053006 55053079 -111597217 + MIRb SINE MIR 154 225 -43 9 1005 833 257 14 18 chrX 55053087 55053309 -111596987 - ID_B1 SINE B4 -1 223 3 9 1005 327 351 0 22 chrX 55054186 55054323 -111595973 - MER103 DNA DNA -32 134 1 9 1005 545 259 55 27 chrX 55054624 55054807 -111595489 - Lx9 LINE L1 -1670 5974 5787 9 1005 312 27 0 0 chrX 55054893 55054930 -111595366 + (GA)n Simple_repeat Simple_repeat 1 37 0 9 1005 288 333 80 37 chrX 55054942 55055129 -111595167 + L2c LINE L2 1919 2113 -1306 9 1005 412 301 98 20 chrX 55055162 55055406 -111594890 - L1M4 LINE L1 -5533 1009 747 9 1005 338 327 110 5 chrX 55055642 55055860 -111594436 + L2c LINE L2 2704 2944 -475 9 1005 860 145 233 5 chrX 55055980 55056195 -111594101 + Lx4A LINE L1 6793 7056 -2 9 1005 891 166 133 52 chrX 55056233 55056443 -111593853 + ORR1D1 LTR MaLR 100 326 -48 1 1005 193 359 84 76 chrX 55056492 55056848 -111593448 + L2c LINE L2 3029 3387 0 9 1005 577 286 59 33 chrX 55057165 55057358 -111592938 + ID_B1 SINE B4 80 285 -7 1 1005 307 311 192 20 chrX 55057410 55057561 -111592735 + MIRb SINE MIR 26 202 -66 1 1005 1283 93 5 5 chrX 55057561 55057755 -111592541 + L1Md_F2 LINE L1 6389 6582 0 1 1005 935 124 47 83 chrX 55058060 55058253 -111592043 + B2_Mm2 SINE B2 2 187 -8 1 1005 997 293 99 23 chrX 55058603 55058945 -111591351 + MTD LTR MaLR 52 419 0 1 1005 248 367 72 13 chrX 55059277 55059429 -111590867 + MIRc SINE MIR 108 268 0 1 1005 494 263 148 86 chrX 55059657 55059994 -111590302 + ORR1E LTR MaLR 2 359 0 1 1005 372 229 119 32 chrX 55060484 55060610 -111589686 + MLT1D LTR MaLR 15 151 -354 1 1005 285 336 9 0 chrX 55060740 55060853 -111589443 + MLT1D LTR MaLR 390 503 -2 1 1005 331 270 40 0 chrX 55060855 55060955 -111589341 + MIR SINE MIR 109 212 -50 1 1005 5030 54 0 8 chrX 55060958 55061597 -111588699 - L1Md_F2 LINE L1 -2 6580 5947 1 1005 682 350 55 36 chrX 55062352 55062714 -111587582 - LTR33 LTR ERVL -143 372 4 1 1005 854 139 6 28 chrX 55063404 55063581 -111586715 + CT-rich Low_complexity Low_complexity 1 173 0 1 1005 801 53 8 50 chrX 55063582 55063702 -111586594 - B1_Mus1 SINE Alu -1 147 33 1 1005 453 343 21 7 chrX 55064091 55064232 -111586064 - MLT1A0 LTR MaLR -67 298 156 1 1005 26 0 0 0 chrX 55064306 55064332 -111585964 + AT_rich Low_complexity Low_complexity 1 26 0 1 1005 996 238 21 28 chrX 55064412 55064701 -111585595 - Lx9 LINE L1 -161 7483 7197 1 1005 361 260 111 24 chrX 55064863 55064989 -111585307 + MIRc SINE MIR 54 190 -78 1 1005 226 277 35 24 chrX 55065107 55065192 -111585104 + MLT2B4 LTR ERVL 1 86 -429 1 1005 203 61 0 29 chrX 55065198 55065232 -111585064 + (TCTCTG)n Simple_repeat Simple_repeat 2 34 0 1 1005 257 324 28 56 chrX 55065233 55065341 -111584955 + MLT2B4 LTR ERVL 75 179 -377 1 1005 288 240 0 0 chrX 55065419 55065494 -111584802 + A-rich Low_complexity Low_complexity 3 77 0 1 1005 460 335 142 14 chrX 55066306 55066524 -111583772 + L2 LINE L2 2681 2926 -493 1 1005 29 47 0 0 chrX 55066846 55066889 -111583407 + AT_rich Low_complexity Low_complexity 1 43 0 1 1005 711 241 30 6 chrX 55067533 55067692 -111582604 - B3 SINE B2 0 216 54 1 1005 1979 147 3 44 chrX 55067692 55067783 -111582513 + ORR1A2 LTR MaLR 1 90 -237 1 1005 3957 99 21 2 chrX 55067783 55068348 -111581948 + Lx2 LINE L1 6420 6995 -2 1 1005 1979 147 3 44 chrX 55068348 55068597 -111581699 + ORR1A2 LTR MaLR 91 327 0 1 1005 3380 166 33 18 chrX 55068597 55069265 -111581031 - Lx5 LINE L1 -575 6475 5798 1 1005 770 156 68 31 chrX 55069271 55069463 -111580833 + Lx5 LINE L1 6850 7048 -2 1 1005 540 0 0 0 chrX 55070183 55070243 -111580053 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 1005 459 0 0 0 chrX 55070848 55070899 -111579397 + (TCC)n Simple_repeat Simple_repeat 2 52 0 1 1005 216 324 19 81 chrX 55071290 55071451 -111578845 + L2c LINE L2 3098 3248 -139 1 1005 4424 51 0 0 chrX 55071967 55072539 -111577757 - L1_Mus1 LINE L1 0 6567 6029 1 1005 35778 3 0 0 chrX 55072577 55077505 -111572791 - L1Md_A LINE L1 0 6582 1655 1 1005 1671 198 54 84 chrX 55077620 55077836 -111572460 + MTC LTR MaLR 1 208 -213 1 1005 399 21 0 0 chrX 55077836 55077884 -111572412 + (GAAA)n Simple_repeat Simple_repeat 2 49 0 1 1005 1671 198 54 84 chrX 55077884 55078096 -111572200 + MTC LTR MaLR 209 416 -5 1 1005 275 337 45 0 chrX 55078262 55078351 -111571945 - MLT1N2 LTR MaLR -368 194 102 1 1005 440 321 57 21 chrX 55080127 55080321 -111569975 + MIRc SINE MIR 55 255 -13 1 1005 826 257 23 41 chrX 55080462 55080681 -111569615 - B3 SINE B2 0 216 2 1 1005 401 174 191 67 chrX 55081117 55081167 -111569129 - B1_Mur3 SINE Alu -8 141 97 1 1005 960 209 70 14 chrX 55081167 55081381 -111568915 + URR1A DNA MER1_type 1 226 0 1 1005 401 174 191 67 chrX 55081381 55081435 -111568861 - B1_Mur3 SINE Alu -53 96 24 1 1005 345 82 0 0 chrX 55081624 55081673 -111568623 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 1005 361 267 94 94 chrX 55081691 55081808 -111568488 + B3 SINE B2 74 191 -2 1 1005 727 358 59 51 chrX 55081808 55082223 -111568073 - MLT1E2 LTR MaLR -154 473 42 1 1005 1760 67 0 0 chrX 55082221 55082446 -111567850 - ORR1A2 LTR MaLR -102 225 1 1 1005 10236 132 85 21 chrX 55082446 55084290 -111566006 - ORR1A2-int LTR MaLR 0 1963 2 1 1005 2520 83 3 0 chrX 55084291 55084617 -111565679 - ORR1A2 LTR MaLR 0 327 1 1 1005 225 0 0 0 chrX 55084874 55084899 -111565397 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 1005 746 332 21 38 chrX 55085028 55085486 -111564810 + MLT2B2 LTR ERVL 1 526 -36 1 1005 192 77 0 0 chrX 55085486 55085512 -111564784 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1005 238 377 0 34 chrX 55085512 55085539 -111564757 + MLT2B2 LTR ERVL 527 553 -9 1 1005 3185 65 0 2 chrX 55085872 55086273 -111564023 + MTB LTR MaLR 1 400 0 1 1005 249 33 0 0 chrX 55086660 55086690 -111563606 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1005 297 0 0 0 chrX 55086690 55086722 -111563574 + (GA)n Simple_repeat Simple_repeat 1 33 0 1 1005 405 41 0 0 chrX 55086738 55086787 -111563509 + MT2C_Mm LTR ERVL 420 468 -7 1 1005 287 338 22 37 chrX 55086931 55087066 -111563230 + MIRb SINE MIR 88 220 -48 1 1005 47 82 0 0 chrX 55088024 55088134 -111562162 + AT_rich Low_complexity Low_complexity 1 110 0 1 1005 1715 192 13 37 chrX 55088594 55088977 -111561319 + ORR1D1 LTR MaLR 1 374 0 1 1005 261 139 0 0 chrX 55089249 55089292 -111561004 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1005 432 0 0 0 chrX 55089607 55089655 -111560641 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1005 269 275 260 7 chrX 55089729 55089879 -111560417 - MIRb SINE MIR -5 263 76 1 1005 264 407 32 37 chrX 55090139 55090356 -111559940 - LTR78 LTR ERV1 -312 992 777 1 1005 922 284 48 101 chrX 55090981 55091376 -111558920 - MTE2b LTR MaLR 0 379 6 1 1005 432 329 41 14 chrX 55091934 55092079 -111558217 + RSINE1 SINE B4 2 150 -15 1 1005 396 0 0 0 chrX 55092082 55092126 -111558170 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1005 359 355 41 24 chrX 55092225 55092395 -111557901 + MIRb SINE MIR 7 179 -89 1 1005 296 286 146 67 chrX 55092572 55092737 -111557559 + MER5B DNA MER1_type 1 178 0 1 1005 550 296 39 22 chrX 55092745 55092925 -111557371 - MER58A DNA MER1_type 0 224 42 1 1005 204 318 0 16 chrX 55093009 55093073 -111557223 - L2c LINE L2 -233 3154 3092 1 1005 1007 221 55 0 chrX 55093524 55093723 -111556573 + B3 SINE B2 1 210 -6 1 1005 938 166 0 7 chrX 55093926 55094072 -111556224 + B1_Mur4 SINE Alu 1 145 -5 1 1005 507 38 0 59 chrX 55094072 55094157 -111556139 + (GAAA)n Simple_repeat Simple_repeat 4 83 0 1 1005 241 229 0 0 chrX 55094157 55094205 -111556091 + GA-rich Low_complexity Low_complexity 1 48 0 1 1005 262 308 176 34 chrX 55094433 55094581 -111555715 - MIR SINE MIR -14 254 86 1 1005 681 196 87 82 chrX 55094971 55095078 -111555218 + MTD LTR MaLR 1 122 -297 1 1005 1315 106 17 0 chrX 55095078 55095258 -111555038 - B2_Mm2 SINE B2 -12 183 1 1 1005 681 208 86 91 chrX 55095258 55095351 -111554945 + MTD LTR MaLR 85 184 -235 1 1005 492 32 0 0 chrX 55095415 55095477 -111554819 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 1005 470 289 39 88 chrX 55095611 55095816 -111554480 - ID_B1 SINE B4 -18 206 12 1 1005 250 310 26 8 chrX 55096080 55096197 -111554099 - L1ME4a LINE L1 -21 6103 5985 1 1005 950 259 96 19 chrX 55096530 55096852 -111553444 - Lx8 LINE L1 -4 7469 7123 1 1005 2032 192 77 13 chrX 55097120 55097573 -111552723 + Lx2B LINE L1 6519 7000 0 1 1005 770 301 66 42 chrX 55098759 55099303 -111550993 - L1ME2 LINE L1 -22 6142 5586 1 1005 1163 281 128 25 chrX 55099304 55100323 -111549973 - L1ME4a LINE L1 -2283 5502 4396 1 1005 512 202 0 28 chrX 55100342 55100449 -111549847 + Lx8 LINE L1 7232 7335 -138 1 1005 315 49 0 0 chrX 55100450 55100491 -111549805 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1005 183 129 0 0 chrX 55100628 55100659 -111549637 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 1005 182 105 0 26 chrX 55100728 55100767 -111549529 + (TAAAAA)n Simple_repeat Simple_repeat 2 39 0 1 1005 3570 249 96 46 chrX 55100770 55101894 -111548402 - Lx7 LINE L1 -336 7360 6170 1 1005 2005 60 11 11 chrX 55101894 55102164 -111548132 - L1Md_F2 LINE L1 0 6582 6313 1 1005 3570 249 96 46 chrX 55102164 55102267 -111548029 - Lx7 LINE L1 -1527 6169 6073 1 1005 362 23 0 0 chrX 55102270 55102313 -111547983 + L1Md_F3 LINE L1 6346 6388 -196 1 1005 990 203 25 29 chrX 55102313 55102592 -111547704 - Lx7 LINE L1 -357 5523 5246 1 1005 3356 171 53 31 chrX 55102587 55102900 -111547396 - Lx7 LINE L1 -1345 4535 4235 1 1005 1654 201 10 85 chrX 55102900 55103302 -111546994 - ORR1D1 LTR MaLR -2 372 1 1 1005 3356 171 53 31 chrX 55103302 55103766 -111546530 - Lx7 LINE L1 -1646 4234 3741 1 1005 282 273 80 80 chrX 55103805 55104044 -111546252 - L1MEc LINE L1 -5144 1474 1236 1 1005 236 333 9 0 chrX 55104243 55104354 -111545942 - L1MEc LINE L1 -6282 351 240 1 1005 538 271 222 41 chrX 55104900 55105215 -111545081 - MLT1A LTR MaLR -1 373 2 1 1005 330 67 0 0 chrX 55106554 55106599 -111543697 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 1005 5760 172 85 9 chrX 55106647 55107248 -111543048 - Lx7 LINE L1 -3173 2707 2081 1 1005 3068 65 8 12 chrX 55107248 55107650 -111542646 - MTB LTR MaLR 0 400 1 1 1005 5760 190 96 5 chrX 55107650 55109251 -111541045 - Lx7 LINE L1 -3800 2080 307 1 1005 2091 72 7 0 chrX 55109771 55110047 -111540249 + L1_Mus1 LINE L1 6290 6567 0 1 1005 22 0 0 0 chrX 55110047 55110069 -111540227 + AT_rich Low_complexity Low_complexity 1 22 0 1 1005 318 176 23 12 chrX 55110735 55110821 -111539475 + (TA)n Simple_repeat Simple_repeat 2 88 0 1 1005 1129 248 115 21 chrX 55112759 55113142 -111537154 - MTD LTR MaLR 0 419 1 1 1005 23 68 0 0 chrX 55113575 55113619 -111536677 + AT_rich Low_complexity Low_complexity 1 44 0 1 1005 1636 244 74 3 chrX 55113884 55114262 -111536034 + MTD LTR MaLR 1 405 -14 1 1005 955 292 92 32 chrX 55114275 55114321 -111535975 + L1MB5 LINE L1 5298 5346 -828 1 1005 342 0 0 0 chrX 55114321 55114359 -111535937 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 1005 315 0 0 0 chrX 55114359 55114393 -111535903 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1005 955 292 92 32 chrX 55114393 55114844 -111535452 + L1MB5 LINE L1 5347 5825 -349 1 1005 450 132 132 0 chrX 55114861 55114944 -111535352 + B1_Mur4 SINE Alu 45 138 -12 2 1005 405 0 0 0 chrX 55114944 55114989 -111535307 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 2 1005 359 351 29 46 chrX 55114989 55115042 -111535254 + B4 SINE B4 215 262 -30 2 1005 606 320 39 18 chrX 55115042 55115325 -111534971 + B4A SINE B4 2 290 -2 2 1005 359 351 29 46 chrX 55115325 55115352 -111534944 + B4 SINE B4 263 289 -3 2 1005 307 312 65 0 chrX 55115441 55115579 -111534717 + L1MB5 LINE L1 5979 6125 -58 1 1005 194 386 68 34 chrX 55115580 55115698 -111534598 + L2c LINE L2 3043 3164 -223 2 1005 194 361 84 0 chrX 55116135 55116218 -111534078 + MIRc SINE MIR 31 120 -148 2 1005 666 253 108 22 chrX 55116314 55116629 -111533667 - L1MA9 LINE L1 -14 6298 5957 2 1005 180 0 0 0 chrX 55118064 55118084 -111532212 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1005 513 301 151 21 chrX 55118679 55119063 -111531233 - L1MA5 LINE L1 0 6300 5867 2 1005 581 197 8 41 chrX 55119792 55119914 -111530382 + PB1D9 SINE Alu 3 120 0 2 1005 334 185 12 12 chrX 55120114 55120196 -111530100 + CT-rich Low_complexity Low_complexity 3 84 0 2 1005 238 294 43 86 chrX 55120535 55120628 -111529668 - PB1D9 SINE Alu -31 89 1 2 1005 244 286 0 0 chrX 55122401 55122457 -111527839 - MIRb SINE MIR -8 260 205 2 1005 203 152 0 0 chrX 55122908 55122941 -111527355 + (TGG)n Simple_repeat Simple_repeat 3 35 0 2 1005 369 0 0 0 chrX 55122945 55122986 -111527310 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1005 327 195 13 0 chrX 55123192 55123269 -111527027 + MIRc SINE MIR 190 267 -1 2 1005 190 133 0 0 chrX 55123332 55123362 -111526934 + L2a LINE L2 3389 3418 -8 2 1005 228 67 0 0 chrX 55123684 55123714 -111526582 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1005 416 366 6 0 chrX 55123724 55123885 -111526411 - RSINE1 SINE B4 0 165 4 2 1005 745 286 9 18 chrX 55124396 55124613 -111525683 + ID_B1 SINE B4 2 216 -8 2 1005 1198 0 0 14 chrX 55124624 55124768 -111525528 + (GGAA)n Simple_repeat Simple_repeat 3 144 0 2 1005 1463 73 16 0 chrX 55124948 55125139 -111525157 - B2_Mm2 SINE B2 0 195 2 2 1005 733 292 15 30 chrX 55125168 55125366 -111524930 + ID_B1 SINE B4 15 209 -15 2 1005 236 356 48 48 chrX 55125422 55125711 -111524585 + L3 LINE CR1 3628 3916 -573 2 1005 402 267 58 26 chrX 55125776 55125930 -111524366 - L2 LINE L2 -985 2434 2276 2 1005 1171 304 36 14 chrX 55125959 55126322 -111523974 - MLT1B LTR MaLR 0 390 20 2 1005 360 331 72 11 chrX 55126427 55126607 -111523689 - L2 LINE L2 -1190 2229 2039 2 1005 714 43 0 0 chrX 55127253 55127347 -111522949 + (TG)n Simple_repeat Simple_repeat 2 95 0 2 1005 204 40 0 0 chrX 55127347 55127371 -111522925 + (TAGA)n Simple_repeat Simple_repeat 1 25 0 2 1005 334 273 91 0 chrX 55127701 55127811 -111522485 + PB1D9 SINE Alu 1 120 0 2 1005 207 299 117 36 chrX 55127854 55127965 -111522331 - MIRc SINE MIR -134 134 15 2 1005 1144 93 0 0 chrX 55128590 55128751 -111521545 + L1_Mus1 LINE L1 6407 6567 0 2 1005 224 30 0 29 chrX 55128758 55128792 -111521504 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 2 1005 5042 58 0 11 chrX 55129485 55130129 -111520167 - L1Md_F2 LINE L1 -6 6576 5940 2 1005 3459 56 5 0 chrX 55130129 55130647 -111519649 + L1Md_F2 LINE L1 5422 5951 -631 2 1005 295 350 58 7 chrX 55131475 55131613 -111518683 + MIR3 SINE MIR 17 161 -47 2 1005 278 390 6 23 chrX 55131620 55131796 -111518500 + MIR SINE MIR 62 234 -28 2 1005 265 396 83 13 chrX 55133259 55133655 -111516641 + L3 LINE CR1 3920 4343 -146 2 1005 203 333 11 44 chrX 55133864 55133955 -111516341 - L2a LINE L2 0 3426 3339 2 1005 827 130 7 0 chrX 55134919 55135065 -111515231 + (TC)n Simple_repeat Simple_repeat 2 148 0 2 1005 630 299 93 23 chrX 55135192 55135449 -111514847 + LTR68 LTR ERV1 1 275 -465 2 1005 410 222 0 9 chrX 55135452 55135523 -111514773 + polypurine Low_complexity Low_complexity 5 75 0 2 1005 1188 106 0 0 chrX 55135523 55135702 -111514594 + (GGA)n Simple_repeat Simple_repeat 2 180 0 2 1005 882 170 4 11 chrX 55135702 55135837 -111514459 + polypurine Low_complexity Low_complexity 1 134 0 2 1005 1305 83 0 0 chrX 55135837 55136017 -111514279 + (GGA)n Simple_repeat Simple_repeat 1 180 0 2 1005 1473 39 0 0 chrX 55136023 55136203 -111514093 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 2 1005 882 151 6 11 chrX 55136203 55136277 -111514019 + polypurine Low_complexity Low_complexity 106 179 0 2 1005 1408 67 6 0 chrX 55136378 55136556 -111513740 + B2_Mm1t SINE B2 1 179 -14 2 1005 279 163 0 0 chrX 55136957 55137006 -111513290 - L2a LINE L2 -8 3418 3370 2 1005 470 318 105 5 chrX 55137852 55138222 -111512074 + L1M4 LINE L1 773 1179 -5363 2 1005 18854 169 5 59 chrX 55138298 55143305 -111506991 + L1Md_A LINE L1 217 5168 -718 2 1005 508 263 211 21 chrX 55143309 55143789 -111506507 + L1MB5 LINE L1 5523 6115 -69 2 1005 1010 274 70 0 chrX 55143852 55144111 -111506185 - B4 SINE B4 -10 282 6 2 1005 358 321 28 0 chrX 55144113 55144219 -111506077 - PB1D10 SINE Alu -7 110 2 2 1005 471 298 104 21 chrX 55144899 55145091 -111505205 - MIR SINE MIR -54 208 1 2 1005 291 344 68 70 chrX 55145996 55146348 -111503948 - L2b LINE L2 -225 3150 2804 2 1005 235 271 93 103 chrX 55146466 55146573 -111503723 + B3A SINE B2 92 197 -1 2 1005 421 367 12 19 chrX 55146603 55146764 -111503532 + RSINE1 SINE B4 3 162 -3 2 1005 261 271 0 17 chrX 55147184 55147244 -111503052 + BC1_Mm scRNA scRNA 3 61 -91 2 1005 283 239 45 5 chrX 55147247 55147362 -111502934 + L1MC LINE L1 4777 4892 -1248 2 1005 22 35 0 0 chrX 55147363 55147392 -111502904 + AT_rich Low_complexity Low_complexity 1 29 0 2 1005 1145 215 98 62 chrX 55147401 55147807 -111502489 - Lx9 LINE L1 -43 7601 7181 2 1005 334 348 126 6 chrX 55147807 55147966 -111502330 + L1M5 LINE L1 4906 5083 -1063 2 1005 447 276 0 65 chrX 55147984 55148098 -111502198 + B1F SINE Alu 30 137 -12 2 1005 225 0 0 0 chrX 55148098 55148123 -111502173 + (CCA)n Simple_repeat Simple_repeat 1 25 0 2 1005 30 0 0 0 chrX 55148138 55148168 -111502128 + AT_rich Low_complexity Low_complexity 1 30 0 2 1005 249 212 15 0 chrX 55148168 55148234 -111502062 + Lx7 LINE L1 7608 7674 -22 2 1005 23 0 0 0 chrX 55148247 55148270 -111502026 + AT_rich Low_complexity Low_complexity 1 23 0 2 1005 382 306 9 9 chrX 55148279 55148391 -111501905 + B3A SINE B2 4 115 -83 2 1005 288 246 16 16 chrX 55148577 55148639 -111501657 + RSINE1 SINE B4 78 139 -26 2 1005 473 291 13 18 chrX 55148696 55148920 -111501376 + L1M5 LINE L1 5263 5485 -959 2 1005 276 312 119 49 chrX 55148926 55149111 -111501185 + B3A SINE B2 1 198 0 2 1005 250 350 68 8 chrX 55149122 55149240 -111501056 + Lx8 LINE L1 7201 7325 -148 2 1005 434 149 32 0 chrX 55149251 55149345 -111500951 + (TATATG)n Simple_repeat Simple_repeat 3 99 0 2 1005 400 359 22 50 chrX 55149373 55149552 -111500744 + Tigger5 DNA MER2_type 60 233 -2173 2 1005 1117 58 7 0 chrX 55149587 55149725 -111500571 + B1_Mm SINE Alu 1 139 -8 2 1005 243 0 0 0 chrX 55149725 55149752 -111500544 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2 1005 1813 148 140 19 chrX 55149891 55150308 -111499988 - RMER4B LTR ERVK -150 435 17 2 1005 525 286 71 33 chrX 55150657 55150841 -111499455 - MIRb SINE MIR 0 268 78 2 1005 197 318 112 0 chrX 55152657 55152764 -111497532 + MIRb SINE MIR 103 221 -47 2 1005 240 299 102 0 chrX 55153135 55153292 -111497004 - L1ME3B LINE L1 -225 6015 5843 2 1005 38 61 0 0 chrX 55153341 55153407 -111496889 + AT_rich Low_complexity Low_complexity 1 66 0 2 1005 749 281 83 24 chrX 55153429 55153801 -111496495 - L1MA5 LINE L1 -6 6294 5901 2 1005 887 294 82 7 chrX 55153853 55154414 -111495882 - L1MB4 LINE L1 -81 6093 5491 2 1005 412 255 0 21 chrX 55154425 55154521 -111495775 - B1F SINE Alu -10 139 46 2 1005 380 248 161 50 chrX 55154521 55154586 -111495710 - ID_B1 SINE B4 -10 214 36 2 1005 392 319 21 7 chrX 55154602 55154744 -111495552 - B1F SINE Alu -5 144 1 2 1005 744 301 40 16 chrX 55154879 55155331 -111494965 - L1MB4 LINE L1 -3012 3134 2672 2 1005 2040 234 72 50 chrX 55155497 55156418 -111493878 + Lx9 LINE L1 5085 6048 -1596 2 1005 372 71 0 0 chrX 55156542 55156598 -111493698 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1005 1945 165 76 0 chrX 55156609 55156966 -111493330 + Lx9 LINE L1 6342 6725 -919 2 1005 1852 196 96 36 chrX 55156963 55157434 -111492862 + Lx9 LINE L1 6949 7447 -197 2 1005 330 26 0 0 chrX 55157434 55157473 -111492823 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1005 331 267 50 120 chrX 55157475 55157675 -111492621 - L1ME3B LINE L1 -594 5646 5461 2 1005 348 88 0 0 chrX 55157961 55158018 -111492278 + (TG)n Simple_repeat Simple_repeat 1 57 0 2 1005 210 310 0 0 chrX 55158023 55158081 -111492215 - ID4 SINE ID -23 60 3 2 1005 501 245 82 19 chrX 55159276 55159434 -111490862 - MIR SINE MIR -10 252 85 2 1005 713 173 96 15 chrX 55159477 55159612 -111490684 - B1_Mur4 SINE Alu 0 150 5 2 1005 455 279 91 24 chrX 55159649 55159814 -111490482 + Lx8 LINE L1 7071 7246 -227 2 1005 333 257 94 34 chrX 55160192 55160341 -111489955 - L1MA4A LINE L1 -331 5969 5812 2 1005 243 0 0 0 chrX 55160348 55160375 -111489921 + (TTG)n Simple_repeat Simple_repeat 3 29 0 2 1005 209 222 16 0 chrX 55160375 55160438 -111489858 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 1005 313 218 31 0 chrX 55160448 55160538 -111489758 - L1MA4A LINE L1 -404 5779 5678 2 1005 1671 121 67 111 chrX 55160565 55160908 -111489388 - ORR1A4 LTR MaLR 0 329 2 2 1005 279 0 0 0 chrX 55160909 55160940 -111489356 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 2 1005 862 290 40 27 chrX 55160980 55161356 -111488940 - L1MB7 LINE L1 -62 6122 5742 2 1005 28 71 0 0 chrX 55161433 55161489 -111488807 + AT_rich Low_complexity Low_complexity 1 56 0 2 1005 401 305 93 107 chrX 55161897 55162261 -111488035 - L1M4 LINE L1 -3274 2872 2514 2 1005 259 261 11 78 chrX 55162725 55162904 -111487392 + L1M4 LINE L1 2203 2369 -3777 3 1005 461 235 0 64 chrX 55162910 55163019 -111487277 + PB1D9 SINE Alu 2 103 -17 3 1005 1211 159 56 9 chrX 55163106 55163322 -111486974 + URR1A DNA MER1_type 1 226 0 3 1005 267 211 0 50 chrX 55163637 55163697 -111486599 + L2c LINE L2 3287 3343 -44 3 1005 183 370 45 27 chrX 55163697 55163748 -111486548 + MIRm SINE MIR 161 273 -3 3 1005 251 300 110 28 chrX 55164976 55165183 -111485113 - MIRc SINE MIR -37 225 10 3 1005 541 328 40 16 chrX 55165806 55166054 -111484242 + L2c LINE L2 2670 2923 -496 3 1005 277 326 113 60 chrX 55166147 55166297 -111483999 + MIR SINE MIR 28 185 -77 3 1005 210 233 82 3 chrX 55166365 55166425 -111483871 + L2c LINE L2 3016 3079 -340 3 1005 181 214 0 45 chrX 55167026 55167070 -111483226 - MIRb SINE MIR -27 241 200 3 1005 248 323 0 30 chrX 55167108 55167175 -111483121 - ID4 SINE ID -4 79 15 3 1005 266 277 0 0 chrX 55167217 55167282 -111483014 - MIRc SINE MIR -124 144 80 3 1005 284 365 50 25 chrX 55167512 55167714 -111482582 + MER20 DNA MER1_type 7 213 -6 3 1005 284 301 76 7 chrX 55168800 55168944 -111481352 + L1MB5 LINE L1 6021 6174 0 3 1005 197 59 0 56 chrX 55169586 55169622 -111480674 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1005 218 105 26 0 chrX 55172988 55173026 -111477270 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1005 342 0 0 0 chrX 55173536 55173574 -111476722 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1005 207 0 0 0 chrX 55173968 55173991 -111476305 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1005 252 0 0 0 chrX 55177446 55177474 -111472822 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 3 1005 434 297 13 45 chrX 55178456 55178611 -111471685 + RSINE1 SINE B4 2 151 -14 3 1005 703 186 101 68 chrX 55179060 55179267 -111471029 + B3 SINE B2 2 215 -1 3 1005 450 246 138 29 chrX 55179362 55179601 -111470695 + MLT1A1 LTR MaLR 144 408 0 3 1005 948 243 11 14 chrX 55179720 55180004 -111470292 + MER33 DNA MER1_type 7 289 -35 3 1005 185 355 0 0 chrX 55180107 55180169 -111470127 + L2a LINE L2 3340 3401 -25 3 1005 598 283 51 0 chrX 55180214 55180352 -111469944 - RSINE1 SINE B4 0 165 21 3 1005 195 247 96 24 chrX 55180536 55180619 -111469677 + MIR3 SINE MIR 82 170 -38 3 1005 335 289 0 0 chrX 55180780 55180877 -111469419 - BC1_Mm scRNA scRNA -54 98 2 3 1005 458 104 26 0 chrX 55180943 55181020 -111469276 + (GGGA)n Simple_repeat Simple_repeat 3 81 0 3 1006 274 261 34 67 chrX 55181454 55181573 -111468723 - MER102c DNA MER1_type -1 330 216 3 1006 718 258 7 0 chrX 55181676 55181827 -111468469 - RSINE1 SINE B4 -6 159 8 3 1006 563 277 44 0 chrX 55182028 55182165 -111468131 + B1F2 SINE Alu 1 143 -6 3 1006 286 282 54 0 chrX 55183403 55183493 -111466803 + B1F2 SINE Alu 7 103 -17 3 1006 244 158 0 34 chrX 55183497 55183556 -111466740 + GA-rich Low_complexity Low_complexity 3 59 0 3 1006 972 124 6 11 chrX 55183580 55183760 -111466536 + (GAA)n Simple_repeat Simple_repeat 1 179 0 3 1006 201 239 0 21 chrX 55183766 55183813 -111466483 + GA-rich Low_complexity Low_complexity 3 48 0 3 1006 528 274 68 37 chrX 55183973 55184136 -111466160 + B3A SINE B2 1 168 -30 3 1006 225 0 0 0 chrX 55184136 55184161 -111466135 + (CAAT)n Simple_repeat Simple_repeat 1 25 0 3 1006 937 152 203 0 chrX 55184300 55184477 -111465819 + B3 SINE B2 3 215 -1 3 1006 188 35 35 0 chrX 55184653 55184682 -111465614 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 3 1006 261 0 0 0 chrX 55185919 55185948 -111464348 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 1006 650 292 18 0 chrX 55185952 55186123 -111464173 - B3A SINE B2 -20 178 5 3 1006 614 121 0 10 chrX 55186218 55186318 -111463978 - B2_Mm2 SINE B2 -18 177 79 3 1006 252 337 11 46 chrX 55186725 55186812 -111463484 - RSINE1 SINE B4 0 165 82 3 1006 2833 72 15 35 chrX 55186880 55187284 -111463012 + MTA_Mm LTR MaLR 1 396 0 3 1006 3939 90 2 5 chrX 55187284 55187866 -111462430 + MTA_Mm-int LTR MaLR 1 580 -518 3 1006 714 265 59 0 chrX 55188567 55188771 -111461525 + L1MA4 LINE L1 5680 5895 -405 3 1006 539 198 99 0 chrX 55189186 55189297 -111460999 - RSINE1 SINE B4 -41 124 3 3 1006 576 306 141 16 chrX 55189435 55189691 -111460605 + B4A SINE B4 2 289 -3 3 1006 22 0 0 0 chrX 55189821 55189843 -111460453 + AT_rich Low_complexity Low_complexity 1 22 0 3 1006 437 291 61 35 chrX 55190537 55190798 -111459498 + MLT1F2 LTR MaLR 411 679 -1 3 1006 632 192 193 50 chrX 55191039 55191220 -111459076 - B3 SINE B2 -9 207 1 3 1006 180 310 49 20 chrX 55192665 55192767 -111457529 - MIR SINE MIR -118 144 40 3 1006 639 280 68 62 chrX 55192903 55193242 -111457054 + L1MA4 LINE L1 5488 5828 -472 3 1006 946 101 0 12 chrX 55193321 55193481 -111456815 + (TAGA)n Simple_repeat Simple_repeat 1 158 0 3 1006 514 238 0 76 chrX 55193523 55193655 -111456641 - B1F SINE Alu -10 139 18 3 1006 462 212 29 86 chrX 55194256 55194431 -111455865 + ID_B1 SINE B4 2 166 -58 3 1006 1940 240 112 22 chrX 55194457 55195127 -111455169 - L1MC4 LINE L1 -232 7810 7081 3 1006 192 295 120 50 chrX 55195361 55195461 -111454835 - MIRb SINE MIR -8 260 154 3 1006 212 149 21 0 chrX 55196163 55196210 -111454086 + CT-rich Low_complexity Low_complexity 4 51 0 3 1006 355 301 87 10 chrX 55196295 55196399 -111453897 - PB1D10 SINE Alu 0 117 6 3 1006 954 53 8 0 chrX 55196528 55196659 -111453637 + B2_Mm2 SINE B2 1 132 -63 3 1006 303 49 0 0 chrX 55197308 55197349 -111452947 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1006 240 224 147 18 chrX 55197875 55197984 -111452312 + MIRb SINE MIR 88 210 -58 3 1006 1692 36 0 0 chrX 55198475 55198668 -111451628 + B2_Mm1a SINE B2 1 193 0 3 1006 234 271 11 23 chrX 55199078 55199165 -111451131 - MIRc SINE MIR -95 173 88 3 1006 441 0 0 0 chrX 55199441 55199490 -111450806 + (GGAA)n Simple_repeat Simple_repeat 2 50 0 3 1006 623 144 106 0 chrX 55199492 55199596 -111450700 + B1_Mus1 SINE Alu 6 120 -28 3 1006 560 14 14 0 chrX 55199596 55199665 -111450631 + (GGAA)n Simple_repeat Simple_repeat 4 73 0 3 1006 1690 160 85 56 chrX 55200016 55200406 -111449890 - MTC LTR MaLR -20 401 1 3 1006 274 287 137 72 chrX 55200424 55200563 -111449733 + B4 SINE B4 126 273 -19 3 1006 182 174 0 21 chrX 55200601 55200648 -111449648 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1006 378 0 0 0 chrX 55200704 55200746 -111449550 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1006 229 169 17 17 chrX 55200958 55201018 -111449278 + CT-rich Low_complexity Low_complexity 1 60 0 3 1006 1025 104 0 0 chrX 55201827 55201962 -111448334 + B1_Mus1 SINE Alu 1 135 -13 3 1006 366 23 0 0 chrX 55201964 55202007 -111448289 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 3 1006 555 215 0 0 chrX 55202015 55202122 -111448174 + B1_Mur2 SINE Alu 21 127 -22 3 1006 261 0 0 0 chrX 55202129 55202158 -111448138 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1006 2100 285 64 23 chrX 55202647 55203567 -111446729 + L1MA6 LINE L1 5311 6268 -32 3 1006 249 108 0 0 chrX 55204344 55204381 -111445915 + (T)n Simple_repeat Simple_repeat 1 37 0 3 1006 768 288 91 50 chrX 55205248 55205690 -111444606 + Lx7 LINE L1 5903 6362 -1334 3 1006 279 0 0 0 chrX 55206033 55206064 -111444232 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1006 1150 76 0 0 chrX 55206064 55206209 -111444087 - B1_Mm SINE Alu -2 145 1 3 1006 875 261 87 4 chrX 55206589 55206831 -111443465 + B4A SINE B4 1 262 -30 3 1006 575 252 7 35 chrX 55206965 55207109 -111443187 + RSINE1 SINE B4 3 142 -23 3 1006 384 333 28 11 chrX 55208503 55208679 -111441617 + L1M5 LINE L1 5595 5773 -351 3 1006 335 274 11 11 chrX 55208984 55209161 -111441135 + GA-rich Low_complexity Low_complexity 1 177 0 3 1006 540 158 0 0 chrX 55210794 55210889 -111439407 + GA-rich Low_complexity Low_complexity 3 97 0 3 1006 1901 223 65 54 chrX 55211417 55212246 -111438050 + Lx9 LINE L1 5517 6486 -1158 3 1006 1286 192 5 0 chrX 55212246 55212470 -111437826 + URR1B DNA MER1_type 1 225 0 3 1006 1901 233 87 106 chrX 55212470 55212785 -111437511 + Lx9 LINE L1 6487 6802 -842 3 1006 363 341 65 0 chrX 55212832 55213002 -111437294 - MIR SINE MIR -51 211 31 3 1006 348 24 0 0 chrX 55213005 55213046 -111437250 + (TA)n Simple_repeat Simple_repeat 1 41 0 3 1006 218 159 0 14 chrX 55213249 55213319 -111436977 + T-rich Low_complexity Low_complexity 2 70 0 3 1006 460 188 12 0 chrX 55213322 55213407 -111436889 + MTD LTR MaLR 13 98 -321 3 1006 1106 171 12 13 chrX 55213434 55213653 -111436643 + MTD LTR MaLR 148 411 -8 3 1006 485 243 29 0 chrX 55213953 55214056 -111436240 + B1F SINE Alu 22 127 -22 3 1006 470 345 30 22 chrX 55214105 55214372 -111435924 + L1ME4a LINE L1 5564 5832 -292 3 1006 650 281 12 12 chrX 55214797 55214963 -111435333 - ID_B1 SINE B4 -37 187 22 3 1006 638 267 62 6 chrX 55215495 55215672 -111434624 - B3 SINE B2 -4 212 26 3 1006 1161 68 14 0 chrX 55216954 55217100 -111433196 + B1_Mus1 SINE Alu 1 148 0 3 1006 262 263 62 50 chrX 55217600 55217680 -111432616 + PB1D10 SINE Alu 28 108 -9 3 1006 692 252 14 0 chrX 55217691 55217830 -111432466 + B1_Mur1 SINE Alu 1 141 -8 3 1006 906 154 0 32 chrX 55218129 55218283 -111432013 - B1_Mur4 SINE Alu 0 150 2 3 1006 358 222 34 17 chrX 55218290 55218409 -111431887 - Lx7 LINE L1 -17 7679 7559 3 1006 201 186 23 0 chrX 55218421 55218464 -111431832 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1006 2784 194 104 50 chrX 55218484 55218911 -111431385 - Lx7 LINE L1 -279 7417 6983 3 1006 2409 134 65 45 chrX 55218911 55219355 -111430941 - Lx LINE L1 -6 6648 6196 4 1006 2784 194 104 50 chrX 55219355 55219612 -111430684 - Lx7 LINE L1 -714 6982 6696 3 1006 1564 306 75 45 chrX 55219615 55220372 -111429924 + MER21B LTR ERV1 82 861 -2 4 1006 3166 65 2 7 chrX 55220770 55221174 -111429122 - L1_Mus1 LINE L1 0 6567 6166 4 1006 212 284 78 22 chrX 55221987 55222077 -111428219 - MIR SINE MIR -90 172 78 4 1006 626 212 32 26 chrX 55223485 55223674 -111426622 - MER33 DNA MER1_type -67 257 68 4 1006 1887 169 38 14 chrX 55224568 55224933 -111425363 - ORR1D1 LTR MaLR 0 374 1 4 1006 224 205 0 0 chrX 55225077 55225116 -111425180 + polypurine Low_complexity Low_complexity 1 39 0 4 1006 1331 146 92 92 chrX 55225279 55225595 -111424701 + ORR1B1 LTR MaLR 38 353 -41 4 1006 1620 26 5 20 chrX 55225595 55225791 -111424505 + B2_Mm1t SINE B2 1 193 0 4 1006 627 81 0 0 chrX 55225813 55225900 -111424396 + B1_Mus2 SINE Alu 1 87 -60 4 1006 847 155 20 27 chrX 55226455 55226601 -111423695 + B1_Mus1 SINE Alu 2 146 -2 4 1006 950 48 0 8 chrX 55226601 55226726 -111423570 + (GGAGA)n Simple_repeat Simple_repeat 5 128 0 4 1006 980 67 82 0 chrX 55226783 55226918 -111423378 + B1_Mus1 SINE Alu 2 147 -1 4 1006 262 145 16 31 chrX 55226919 55226983 -111423313 + A-rich Low_complexity Low_complexity 4 66 0 4 1006 180 362 0 0 chrX 55227084 55227142 -111423154 - L2 LINE L2 -1007 2412 2355 4 1006 1275 122 11 5 chrX 55227386 55227575 -111422721 + B2_Mm2 SINE B2 2 191 -4 4 1006 23 0 0 0 chrX 55227585 55227608 -111422688 + AT_rich Low_complexity Low_complexity 1 23 0 4 1006 369 283 9 19 chrX 55227628 55227672 -111422624 + B1F SINE Alu 11 54 -95 4 1006 1664 189 67 30 chrX 55227672 55228033 -111422263 - ORR1D1 LTR MaLR 0 374 1 4 1006 369 283 9 19 chrX 55228033 55228096 -111422200 + B1F SINE Alu 55 117 -32 4 1006 243 88 0 0 chrX 55228228 55228262 -111422034 + (CAAT)n Simple_repeat Simple_repeat 1 34 0 4 1006 216 0 0 0 chrX 55229012 55229036 -111421260 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 4 1006 238 253 62 12 chrX 55229158 55229238 -111421058 - MER5A1 DNA MER1_type -49 117 34 4 1006 1209 266 78 6 chrX 55229524 55229872 -111420424 - MTEb LTR MaLR -4 375 3 4 1006 1440 88 5 0 chrX 55229897 55230089 -111420207 + B2_Mm1a SINE B2 1 193 0 4 1006 21 0 0 0 chrX 55230115 55230136 -111420160 + AT_rich Low_complexity Low_complexity 1 21 0 4 1006 730 181 63 0 chrX 55230267 55230394 -111419902 - B1_Mur4 SINE Alu -13 137 3 4 1006 26 0 0 0 chrX 55230900 55230926 -111419370 + AT_rich Low_complexity Low_complexity 1 26 0 4 1006 1206 68 0 0 chrX 55230929 55231076 -111419220 + B1_Mus1 SINE Alu 2 148 0 4 1006 201 289 0 0 chrX 55231076 55231128 -111419168 + A-rich Low_complexity Low_complexity 1 52 0 4 1006 534 86 0 0 chrX 55231972 55232053 -111418243 + (TC)n Simple_repeat Simple_repeat 2 82 0 4 1006 411 21 0 0 chrX 55232053 55232101 -111418195 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1006 1577 256 65 35 chrX 55232110 55232600 -111417696 - Lx9 LINE L1 -267 7377 6873 4 1006 1449 82 0 15 chrX 55232789 55232986 -111417310 + B2_Mm2 SINE B2 1 194 -1 4 1006 747 144 0 0 chrX 55233193 55233360 -111416936 + (TC)n Simple_repeat Simple_repeat 2 168 0 4 1006 396 0 0 0 chrX 55233360 55233404 -111416892 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1006 520 267 8 8 chrX 55233619 55233751 -111416545 - ID_B1 SINE B4 -2 222 91 4 1006 322 387 59 12 chrX 55233964 55234134 -111416162 - Charlie15a DNA MER1_type -11 213 36 4 1006 489 234 50 28 chrX 55234166 55234307 -111415989 + B1F SINE Alu 6 149 0 4 1006 206 265 0 0 chrX 55234523 55234572 -111415724 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 4 1006 693 171 8 0 chrX 55234576 55234699 -111415597 - B1_Mus1 SINE Alu -1 147 24 4 1006 522 261 34 0 chrX 55234786 55234905 -111415391 - B1F1 SINE Alu -4 145 23 4 1006 248 91 23 0 chrX 55235149 55235193 -111415103 + (TTTC)n Simple_repeat Simple_repeat 2 46 0 4 1006 892 179 114 0 chrX 55236334 55236518 -111413778 + B3 SINE B2 4 208 -8 4 1006 261 255 0 0 chrX 55236666 55236717 -111413579 + ID4 SINE ID 32 82 -1 4 1006 1546 331 24 24 chrX 55236726 55237378 -111412918 + Lx8 LINE L1 6351 6999 -461 4 1006 477 302 127 25 chrX 55237386 55237661 -111412635 + Lx8 LINE L1 7165 7467 -6 4 1006 22 56 0 0 chrX 55237662 55237698 -111412598 + AT_rich Low_complexity Low_complexity 1 36 0 4 1006 233 317 135 18 chrX 55237880 55238050 -111412246 - MIR SINE MIR -57 205 16 4 1006 744 167 0 0 chrX 55238279 55238423 -111411873 + (TG)n Simple_repeat Simple_repeat 2 145 0 4 1006 225 0 0 0 chrX 55238893 55238918 -111411378 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1006 548 409 79 58 chrX 55239020 55239550 -111410746 + MER115 DNA Tip100 29 569 -124 4 1006 1335 163 4 45 chrX 55239614 55239883 -111410413 - MT2A LTR ERVL -275 258 1 4 1006 266 253 43 21 chrX 55240248 55240341 -111409955 - L1MC5 LINE L1 -62 7899 7805 4 1006 973 110 0 7 chrX 55240357 55240512 -111409784 + URR1A DNA MER1_type 73 226 0 4 1006 464 244 16 0 chrX 55242146 55242273 -111408023 + L1ME3B LINE L1 5745 5873 -367 4 1006 278 313 140 37 chrX 55242273 55242409 -111407887 + B4 SINE B4 2 151 -141 4 1006 785 220 18 27 chrX 55242413 55242633 -111407663 + Lx7 LINE L1 5697 5914 -1782 4 1006 840 84 0 0 chrX 55242649 55242756 -111407540 + U6 snRNA snRNA 1 107 0 4 1006 1829 41 0 0 chrX 55242756 55242976 -111407320 + L1_Mus1 LINE L1 6347 6566 -1 4 1006 270 260 12 49 chrX 55243111 55243192 -111407104 + Lx8 LINE L1 6252 6329 -1144 4 1006 1192 48 0 0 chrX 55243209 55243354 -111406942 + B1_Mm SINE Alu 1 145 -2 4 1006 1572 219 100 8 chrX 55243387 55243760 -111406536 - MTD LTR MaLR -14 405 13 4 1006 201 74 0 0 chrX 55243761 55243788 -111406508 + (GAA)n Simple_repeat Simple_repeat 2 28 0 4 1006 1195 99 11 23 chrX 55243792 55243968 -111406328 + B2_Mm1t SINE B2 1 174 -19 4 1006 2012 144 20 9 chrX 55243998 55244348 -111405948 - ORR1B1 LTR MaLR 0 394 41 4 1006 3543 268 67 14 chrX 55244356 55245362 -111404934 + Lx8 LINE L1 6350 7408 -65 4 1006 1074 52 8 0 chrX 55246551 55246685 -111403611 + B1_Mus2 SINE Alu 1 135 -12 4 1006 879 83 0 0 chrX 55246685 55246806 -111403490 + (GAA)n Simple_repeat Simple_repeat 2 122 0 4 1006 919 48 8 0 chrX 55246832 55246958 -111403338 + B1_Mus1 SINE Alu 17 143 -5 4 1006 399 89 0 0 chrX 55246958 55247014 -111403282 + (GAA)n Simple_repeat Simple_repeat 3 58 0 4 1006 1072 263 44 78 chrX 55247097 55247481 -111402815 + MTEb LTR MaLR 1 371 -8 4 1006 229 250 111 56 chrX 55248124 55248196 -111402100 - ID4_ SINE ID -1 82 7 4 1006 360 261 0 0 chrX 55248315 55248384 -111401912 + B1F SINE Alu 1 69 -80 4 1006 216 291 0 0 chrX 55248511 55248566 -111401730 + ID4 SINE ID 7 61 -22 4 1006 606 75 0 0 chrX 55248570 55248663 -111401633 + (CA)n Simple_repeat Simple_repeat 1 93 0 4 1006 210 303 30 0 chrX 55248838 55248904 -111401392 - ID4_ SINE ID -15 68 1 4 1006 286 272 30 53 chrX 55249706 55249838 -111400458 - RLTR13D3 LTR ERVK -42 1072 944 4 1006 262 143 0 0 chrX 55250083 55250125 -111400171 - B2_Mm2 SINE B2 -153 42 1 4 1006 22 88 0 0 chrX 55250157 55250214 -111400082 + AT_rich Low_complexity Low_complexity 1 57 0 4 1006 228 191 0 0 chrX 55250573 55250615 -111399681 - RLTR13D3 LTR ERVK -1072 42 1 4 1006 256 288 0 48 chrX 55251737 55251821 -111398475 + B1_Mur1 SINE Alu 32 111 -38 4 1006 627 71 0 0 chrX 55251833 55251918 -111398378 + (GAAA)n Simple_repeat Simple_repeat 2 86 0 4 1006 270 0 0 0 chrX 55251923 55251953 -111398343 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 4 1006 951 140 0 0 chrX 55251956 55252113 -111398183 + (GAAA)n Simple_repeat Simple_repeat 1 157 0 4 1006 349 330 0 0 chrX 55252221 55252327 -111397969 - PB1D10 SINE Alu -11 106 1 4 1006 303 260 2 0 chrX 55252327 55252409 -111397887 + L1M3 LINE L1 4847 4930 -1216 4 1006 787 148 52 0 chrX 55252516 55252651 -111397645 - B1_Mur3 SINE Alu -2 147 6 4 1006 250 270 67 0 chrX 55252667 55252756 -111397540 - L1MB1 LINE L1 -70 6242 6148 4 1006 29 0 0 0 chrX 55252962 55252991 -111397305 + AT_rich Low_complexity Low_complexity 1 29 0 4 1006 350 271 29 11 chrX 55253007 55253177 -111397119 - L1MB1 LINE L1 -192 6120 5951 4 1006 987 249 29 0 chrX 55253186 55253391 -111396905 - B3 SINE B2 -5 211 1 4 1006 233 262 30 15 chrX 55253557 55253623 -111396673 - RSINE1 SINE B4 -2 163 97 4 1006 195 69 0 0 chrX 55253656 55253685 -111396611 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 1006 863 231 77 0 chrX 55253711 55253906 -111396390 - B3 SINE B2 -6 210 1 4 1006 981 248 27 5 chrX 55253910 55254129 -111396167 - B4 SINE B4 -67 225 2 4 1006 2417 181 221 26 chrX 55254352 55254873 -111395423 + Lx9 LINE L1 6873 7477 -167 4 1006 432 0 0 0 chrX 55254873 55254921 -111395375 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1006 2417 181 221 26 chrX 55254921 55255045 -111395251 + Lx9 LINE L1 7478 7643 -1 4 1006 348 328 52 11 chrX 55255149 55255340 -111394956 + L1M3 LINE L1 5078 5276 -864 4 1006 255 212 45 15 chrX 55255384 55255451 -111394845 + PB1D10 SINE Alu 48 116 -1 4 1006 513 84 0 0 chrX 55255451 55255522 -111394774 + (GGAA)n Simple_repeat Simple_repeat 1 71 0 4 1006 770 297 96 55 chrX 55255522 55255579 -111394717 + L1MB4 LINE L1 5272 5327 -837 4 1006 748 130 6 121 chrX 55255579 55255745 -111394551 + B1_Mur3 SINE Alu 3 149 0 4 1006 1479 262 115 37 chrX 55255745 55256424 -111393872 + L1MB4 LINE L1 5328 6052 -128 4 1006 662 162 7 0 chrX 55256427 55256563 -111393733 + CT-rich Low_complexity Low_complexity 1 137 0 4 1006 381 269 45 0 chrX 55256610 55256744 -111393552 + L1MB4 LINE L1 6040 6179 -1 4 1006 704 205 25 12 chrX 55257085 55257265 -111393031 + B3 SINE B2 1 184 -9 5 1006 293 316 20 20 chrX 55257420 55257520 -111392776 - B3A SINE B2 0 198 99 5 1006 721 92 24 0 chrX 55257531 55257656 -111392640 + B1_Mur3 SINE Alu 22 149 0 5 1006 1174 56 0 0 chrX 55257660 55257798 -111392498 + B1_Mm SINE Alu 1 138 -9 5 1006 360 18 35 17 chrX 55257798 55257856 -111392440 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 5 1006 294 246 0 0 chrX 55257931 55257992 -111392304 - B3A SINE B2 -136 62 2 5 1006 216 342 57 38 chrX 55258061 55258219 -111392077 + L2c LINE L2 3227 3387 0 5 1006 597 292 80 40 chrX 55258241 55258541 -111391755 + ORR1E LTR MaLR 13 324 -35 5 1006 304 279 60 37 chrX 55258738 55258872 -111391424 + L2a LINE L2 3280 3416 -10 5 1006 1129 167 16 0 chrX 55258906 55259098 -111391198 + B2_Mm2 SINE B2 1 195 0 5 1006 271 324 0 54 chrX 55259198 55259309 -111390987 - PB1D10 SINE Alu -7 110 6 5 1006 256 204 24 45 chrX 55259259 55259342 -111390954 - B4 SINE B4 -150 142 69 5 1006 531 0 0 0 chrX 55259643 55259702 -111390594 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 1006 972 102 35 23 chrX 55259702 55259873 -111390423 - B2_Mm2 SINE B2 -20 175 3 5 1006 321 254 0 0 chrX 55259887 55259950 -111390346 + B1F1 SINE Alu 70 132 -17 5 1006 866 137 22 0 chrX 55260369 55260508 -111389788 + B1_Mus2 SINE Alu 5 146 -1 5 1006 296 153 0 63 chrX 55260523 55260586 -111389710 + RLTR25A LTR ERVK 514 572 -531 5 1006 766 21 0 0 chrX 55260530 55260625 -111389671 + B1_Mm SINE Alu 43 137 -10 5 1006 319 0 21 42 chrX 55260625 55260673 -111389623 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 5 1006 470 281 8 32 chrX 55260680 55260805 -111389491 + RSINE1 SINE B4 11 132 -33 5 1006 312 83 0 0 chrX 55260805 55260853 -111389443 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 1006 387 83 0 0 chrX 55261321 55261381 -111388915 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 1006 189 0 0 0 chrX 55262026 55262047 -111388249 + (TTCTC)n Simple_repeat Simple_repeat 3 23 0 5 1006 1305 83 0 0 chrX 55262047 55262227 -111388069 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 5 1006 330 242 0 0 chrX 55262234 55262296 -111388000 + polypyrimidine Low_complexity Low_complexity 2 63 0 5 1006 546 182 0 0 chrX 55262298 55262408 -111387888 + CT-rich Low_complexity Low_complexity 2 111 0 5 1006 262 231 31 0 chrX 55262680 55262745 -111387551 - B1F SINE Alu 0 149 83 5 1006 487 198 50 0 chrX 55262820 55262921 -111387375 + B1F1 SINE Alu 7 112 -37 5 1006 272 48 24 0 chrX 55263062 55263104 -111387192 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 5 1006 1054 88 0 0 chrX 55263106 55263243 -111387053 - B1_Mus2 SINE Alu -6 141 5 5 1006 816 188 199 0 chrX 55264834 55265010 -111385286 - B3 SINE B2 -5 211 1 5 1006 1098 65 0 42 chrX 55265551 55265695 -111384601 + B1_Mus1 SINE Alu 2 139 -9 5 1006 222 37 0 0 chrX 55265695 55265722 -111384574 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 5 1006 576 42 0 0 chrX 55265722 55265793 -111384503 + (GGGA)n Simple_repeat Simple_repeat 3 73 0 5 1006 206 208 0 19 chrX 55265793 55265847 -111384449 + GA-rich Low_complexity Low_complexity 3 55 0 5 1006 1297 90 17 0 chrX 55265919 55266096 -111384200 - B2_Mm2 SINE B2 -14 181 2 5 1006 354 300 45 0 chrX 55267326 55267349 -111382947 - B1_Mur2 SINE Alu -32 117 3 5 1006 451 230 0 0 chrX 55267349 55267436 -111382860 - ID_B1 SINE B4 -54 170 84 5 1006 603 0 0 0 chrX 55270570 55270637 -111379659 + (TC)n Simple_repeat Simple_repeat 1 67 0 5 1006 221 152 43 0 chrX 55273071 55273117 -111377179 + T-rich Low_complexity Low_complexity 1 48 0 5 1006 338 287 99 15 chrX 55273135 55273266 -111377030 - B1F SINE Alu -2 147 6 5 1006 262 200 50 9 chrX 55273212 55273291 -111377005 - B4A SINE B4 -148 144 65 5 1006 324 23 23 0 chrX 55277065 55277108 -111373188 + HAL1-3A_ME LINE L1 1969 2012 -846 5 1006 375 23 0 0 chrX 55277108 55277152 -111373144 + (TA)n Simple_repeat Simple_repeat 1 44 0 5 1006 320 125 0 0 chrX 55277167 55277215 -111373081 + HAL1-3A_ME LINE L1 1976 2023 -835 5 1006 198 0 0 0 chrX 55277471 55277493 -111372803 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 1006 524 266 74 54 chrX 55278025 55278228 -111372068 - MER58C DNA MER1_type 0 215 9 5 1006 198 0 0 0 chrX 55278999 55279021 -111371275 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1006 204 200 0 0 chrX 55279765 55279810 -111370486 + T-rich Low_complexity Low_complexity 1 45 0 5 1006 230 73 0 24 chrX 55282480 55282522 -111367774 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 5 1006 283 279 0 25 chrX 55284105 55284186 -111366110 + C-rich Low_complexity Low_complexity 1 79 0 5 1006 183 129 0 0 chrX 55284491 55284522 -111365774 + (CCG)n Simple_repeat Simple_repeat 2 32 0 5 1006 216 97 0 0 chrX 55284614 55284645 -111365651 + (CCA)n Simple_repeat Simple_repeat 3 33 0 5 1006 213 39 0 0 chrX 55288819 55288845 -111361451 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 1006 222 116 0 0 chrX 55289081 55289124 -111361172 + (A)n Simple_repeat Simple_repeat 1 43 0 5 1006 180 0 0 0 chrX 55289886 55289906 -111360390 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 5 1006 562 216 0 69 chrX 55295759 55295918 -111354378 + B1_Mur3 SINE Alu 1 148 -1 5 1006 1784 135 127 96 chrX 55295919 55296336 -111353960 + RLTR23 LTR ERV1 1 430 0 5 1006 699 281 14 39 chrX 55296363 55296570 -111353726 + ID_B1 SINE B4 7 208 -16 5 1006 245 122 61 0 chrX 55296579 55296628 -111353668 + GA-rich Low_complexity Low_complexity 5 56 0 5 1006 928 86 7 7 chrX 55296631 55296772 -111353524 + (GGAAA)n Simple_repeat Simple_repeat 1 141 0 5 1006 831 172 0 46 chrX 55296774 55296926 -111353370 + B1_Mur4 SINE Alu 6 150 0 5 1006 1126 81 6 0 chrX 55297052 55297212 -111353084 + B2_Mm1t SINE B2 27 187 -6 5 1006 439 309 7 7 chrX 55297925 55298062 -111352234 - MARNA DNA Mariner -347 239 103 5 1006 318 50 0 0 chrX 55298142 55298182 -111352114 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1006 256 231 26 47 chrX 55298198 55298299 -111351997 + B1F SINE Alu 6 97 -23 5 1006 1150 76 0 0 chrX 55298619 55298757 -111351539 + B1_Mus2 SINE Alu 1 138 -9 5 1006 270 0 0 0 chrX 55298757 55298787 -111351509 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5 1006 276 100 0 0 chrX 55299312 55299352 -111350944 + (A)n Simple_repeat Simple_repeat 1 40 0 5 1006 1214 54 0 0 chrX 55299845 55299992 -111350304 - B1_Mus1 SINE Alu 0 148 2 5 1006 1579 59 5 0 chrX 55300061 55300263 -111350033 - L1_Mus1 LINE L1 -458 6109 5907 5 1006 3513 45 59 0 chrX 55300264 55300687 -111349609 + L1_Mus1 LINE L1 6120 6567 0 5 1006 1129 64 0 0 chrX 55302289 55302430 -111347866 + B1_Mus1 SINE Alu 2 142 -6 5 1006 320 43 0 21 chrX 55302432 55302479 -111347817 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 5 1006 262 275 12 48 chrX 55302589 55302673 -111347623 + ID4 SINE ID 3 83 0 5 1006 848 138 233 11 chrX 55304783 55304959 -111345337 - B3 SINE B2 0 216 2 5 1006 195 139 0 0 chrX 55304968 55305004 -111345292 + (T)n Simple_repeat Simple_repeat 1 36 0 5 1006 252 267 131 19 chrX 55305005 55305112 -111345184 - B1F2 SINE Alu -2 147 29 5 1006 739 163 15 37 chrX 55306155 55306289 -111344007 + B1_Mur1 SINE Alu 19 149 0 5 1006 328 250 26 0 chrX 55306503 55306579 -111343717 - ID4_ SINE ID -4 79 2 5 1006 297 277 78 19 chrX 55307230 55307333 -111342963 + MIR SINE MIR 85 193 -69 5 1006 308 273 29 39 chrX 55307671 55307774 -111342522 - ID_B1 SINE B4 -42 182 81 5 1006 264 270 40 0 chrX 55308644 55308718 -111341578 + ID4_ SINE ID 4 80 -3 5 1006 442 316 23 0 chrX 55308912 55309045 -111341251 - B1F1 SINE Alu -10 139 4 5 1006 882 155 7 0 chrX 55309144 55309286 -111341010 - B1_Mur3 SINE Alu -5 144 2 5 1006 297 272 40 71 chrX 55309389 55309488 -111340808 + RSINE1 SINE B4 5 100 -65 5 1006 672 189 0 0 chrX 55309493 55309620 -111340676 - B1_Mur2 SINE Alu 0 149 23 5 1006 379 335 32 26 chrX 55310817 55310973 -111339323 + MamSINE1 SINE tRNA 91 247 -43 5 1006 212 161 0 75 chrX 55312102 55312126 -111338170 + T-rich Low_complexity Low_complexity 42 62 0 5 1006 1544 32 16 16 chrX 55312126 55312315 -111337981 - B2_Mm1a SINE B2 -3 190 2 5 1006 212 161 0 75 chrX 55312315 55312357 -111337939 + T-rich Low_complexity Low_complexity 1 41 0 5 125 334 40 0 39 chrX 55312367 55312419 -111337877 - B1_Mm SINE Alu 0 147 98 5 1007 339 130 0 0 chrX 55312553 55312607 -111337689 + (TCTCCC)n Simple_repeat Simple_repeat 6 59 0 5 1007 551 284 23 29 chrX 55312609 55312783 -111337513 - Lx8 LINE L1 -93 7380 7208 5 1007 186 43 0 0 chrX 55312917 55312940 -111337356 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 5 1007 277 194 153 0 chrX 55312940 55313012 -111337284 - B1_Mur3 SINE Alu 0 149 67 5 1007 314 250 192 26 chrX 55313017 55313173 -111337123 - L1MC LINE L1 -2138 5744 5563 5 1007 232 220 113 57 chrX 55313849 55313955 -111336341 + PB1D10 SINE Alu 5 116 -1 5 1007 183 100 0 0 chrX 55313955 55313985 -111336311 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 5 1007 1501 68 16 0 chrX 55314124 55314315 -111335981 + B2_Mm2 SINE B2 1 194 -1 5 1007 308 186 55 41 chrX 55314320 55314393 -111335903 + ID SINE ID 1 74 -150 5 1007 1047 316 111 16 chrX 55314397 55314831 -111335465 + Lx8 LINE L1 6453 6927 -546 5 1007 661 234 0 28 chrX 55314849 55314990 -111335306 + B1_Mur3 SINE Alu 3 139 -10 6 1007 207 0 0 0 chrX 55314990 55315013 -111335283 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1007 260 281 0 0 chrX 55315262 55315326 -111334970 - Lx8 LINE L1 -619 6854 6791 5 1007 459 0 0 0 chrX 55315349 55315400 -111334896 + (TC)n Simple_repeat Simple_repeat 2 52 0 6 1007 287 268 165 0 chrX 55316164 55316261 -111334035 - PB1 SINE Alu -3 124 12 6 1007 655 254 18 115 chrX 55316480 55316698 -111333598 + B3A SINE B2 2 198 0 6 1007 376 235 215 42 chrX 55316834 55317025 -111333271 - ID_B1 SINE B4 0 224 1 6 1007 342 45 0 0 chrX 55317154 55317198 -111333098 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 6 1007 355 200 248 0 chrX 55317199 55317304 -111332992 - B1_Mus1 SINE Alu -13 135 5 6 1007 762 236 0 7 chrX 55317632 55317781 -111332515 + B1_Mur2 SINE Alu 1 148 -1 6 1007 318 264 111 60 chrX 55318842 55318959 -111331337 - B1F SINE Alu -8 141 19 6 1007 1254 47 0 0 chrX 55319018 55319166 -111331130 + B1_Mus1 SINE Alu 1 148 0 6 1007 261 83 0 0 chrX 55319183 55319219 -111331077 + (A)n Simple_repeat Simple_repeat 1 36 0 6 1007 454 287 43 0 chrX 55319226 55319364 -111330932 + B1F SINE Alu 4 147 -2 6 1007 246 208 14 14 chrX 55320440 55320513 -111329783 + B3 SINE B2 143 215 -1 6 1007 997 135 75 17 chrX 55320759 55320932 -111329364 - B2_Mm1t SINE B2 -9 184 2 6 1007 576 216 0 0 chrX 55321017 55321128 -111329168 + B1_Mur1 SINE Alu 3 113 -36 6 1007 234 0 0 0 chrX 55321191 55321217 -111329079 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 1007 591 302 90 45 chrX 55321856 55322123 -111328173 - B4 SINE B4 -12 280 2 6 1007 2721 219 79 31 chrX 55322147 55322765 -111327531 - Lx6 LINE L1 -5 7455 6808 6 1007 2358 172 21 14 chrX 55322765 55323183 -111327113 + MTC LTR MaLR 1 421 0 6 1007 624 142 0 0 chrX 55323184 55323290 -111327006 + MTC-int LTR MaLR 4 109 -1149 6 1007 1330 50 5 9 chrX 55323290 55323513 -111326783 + (GAAA)n Simple_repeat Simple_repeat 1 221 0 6 1007 737 183 118 58 chrX 55323514 55323727 -111326569 + MTC LTR MaLR 181 421 0 6 1007 3039 79 5 10 chrX 55323732 55324130 -111326166 - MTA_Mm LTR MaLR 0 396 1 6 1007 1530 170 48 28 chrX 55324130 55324420 -111325876 - Lx7 LINE L1 -874 6822 6527 6 1007 535 145 0 0 chrX 55324405 55324481 -111325815 - Lx6 LINE L1 -1053 6407 6332 6 1007 6320 131 50 25 chrX 55324478 55325349 -111324947 - L1_Mur3 LINE L1 -1266 4614 3716 6 1007 1466 56 45 0 chrX 55325349 55325528 -111324768 - B2_Mm2 SINE B2 -8 187 1 6 1007 6320 131 50 25 chrX 55325528 55325767 -111324529 - L1_Mur3 LINE L1 -2165 3715 3477 6 1007 783 180 0 0 chrX 55325771 55325921 -111324375 + CT-rich Low_complexity Low_complexity 1 150 0 6 1007 1035 155 20 76 chrX 55325921 55326055 -111324241 - L1_Mur3 LINE L1 -2398 3482 3351 6 1007 183 42 0 0 chrX 55326055 55326079 -111324217 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6 1007 1173 55 7 0 chrX 55326081 55326227 -111324069 - B1_Mm SINE Alu 0 147 1 6 1007 1035 155 20 76 chrX 55326227 55326340 -111323956 - L1_Mur3 LINE L1 -2530 3350 3246 6 1007 2780 188 90 30 chrX 55326347 55326990 -111323306 - L1_Mur3 LINE L1 -6737 991 310 6 1007 1546 246 46 49 chrX 55327747 55328158 -111322138 + Lx5 LINE L1 6634 7043 -7 6 1007 262 203 16 33 chrX 55328209 55328270 -111322026 + PB1D10 SINE Alu 12 71 -46 6 1007 206 240 0 20 chrX 55328270 55328285 -111322011 + (CA)n Simple_repeat Simple_repeat 1 15 0 6 1007 270 0 0 0 chrX 55328285 55328315 -111321981 + (GA)n Simple_repeat Simple_repeat 2 31 0 6 1007 206 240 0 20 chrX 55328315 55328350 -111321946 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1007 464 218 11 0 chrX 55329262 55329349 -111320947 - Lx8 LINE L1 -217 7256 7169 6 1007 501 17 0 0 chrX 55329403 55329461 -111320835 + (TC)n Simple_repeat Simple_repeat 2 59 0 6 1007 315 0 0 0 chrX 55329461 55329495 -111320801 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1007 267 266 31 0 chrX 55329497 55329561 -111320735 - PB1D10 SINE Alu -49 68 3 6 1007 749 127 42 0 chrX 55330737 55330903 -111319393 + GA-rich Low_complexity Low_complexity 1 173 0 6 1007 1071 23 11 44 chrX 55330903 55331085 -111319211 + (GGGAGA)n Simple_repeat Simple_repeat 5 180 0 6 1007 231 296 0 0 chrX 55331378 55331449 -111318847 + ID4_ SINE ID 2 72 -11 6 1007 370 327 65 32 chrX 55331868 55332023 -111318273 + B3A SINE B2 1 160 -38 6 1007 405 0 0 0 chrX 55332026 55332071 -111318225 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1007 261 382 58 14 chrX 55332270 55332477 -111317819 + MIRb SINE MIR 37 252 -16 6 1007 545 235 15 36 chrX 55332557 55332694 -111317602 - ID_B1 SINE B4 -4 220 87 6 1007 612 215 52 0 chrX 55332835 55332970 -111317326 - B1_Mus1 SINE Alu -5 143 2 6 1007 493 191 17 0 chrX 55333030 55333145 -111317151 + (TA)n Simple_repeat Simple_repeat 1 117 0 6 1007 344 77 19 0 chrX 55333499 55333551 -111316745 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 6 1007 402 250 0 0 chrX 55333551 55333627 -111316669 - ID_B1 SINE B4 -36 188 113 6 1007 1258 113 11 0 chrX 55333701 55333886 -111316410 + B2_Mm1t SINE B2 1 187 -6 6 1007 1072 64 7 14 chrX 55333900 55334042 -111316254 + B1_Mus1 SINE Alu 2 142 -6 6 1007 1610 219 53 0 chrX 55334292 55334648 -111315648 - Lx6 LINE L1 -15 7445 7071 6 1007 222 255 39 0 chrX 55334661 55334712 -111315584 - PB1 SINE Alu -51 76 24 6 1007 489 319 110 82 chrX 55334729 55334929 -111315367 - L1ME1 LINE L1 -66 6113 5917 6 1007 805 131 43 21 chrX 55334929 55335069 -111315227 + B1_Mur3 SINE Alu 2 144 -5 6 1007 329 0 24 0 chrX 55335071 55335112 -111315184 + (TAA)n Simple_repeat Simple_repeat 1 42 0 6 1007 489 319 110 82 chrX 55335112 55335236 -111315060 - L1ME1 LINE L1 -263 5916 5777 6 1007 438 75 0 0 chrX 55335811 55335878 -111314418 + (TC)n Simple_repeat Simple_repeat 2 68 0 6 1007 238 263 0 0 chrX 55336729 55336786 -111313510 + GA-rich Low_complexity Low_complexity 3 59 0 6 1007 376 313 60 32 chrX 55337822 55338007 -111312289 - MamRep605 Unknown Unknown -96 780 591 6 1007 760 185 0 23 chrX 55338284 55338417 -111311879 + B3 SINE B2 1 130 -86 6 1007 3645 54 7 0 chrX 55338486 55338949 -111311347 + L1_Mus1 LINE L1 6025 6490 -77 6 1007 650 108 0 23 chrX 55338949 55339073 -111311223 + B1_Mm SINE Alu 33 147 -2 6 1007 261 266 0 132 chrX 55339001 55339092 -111311204 + B4 SINE B4 165 243 -49 6 1007 428 252 40 47 chrX 55339475 55339625 -111310671 - B1F SINE Alu 0 149 1 6 1007 1031 70 0 20 chrX 55339774 55339920 -111310376 - B1_Mus2 SINE Alu -1 146 4 6 1007 234 333 13 13 chrX 55340390 55340466 -111309830 + L2 LINE L2 2647 2722 -697 6 1007 342 0 0 0 chrX 55341540 55341578 -111308718 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1007 486 0 0 0 chrX 55342121 55342175 -111308121 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1007 254 302 23 101 chrX 55342409 55342538 -111307758 - L2c LINE L2 0 3387 3269 6 1007 875 161 0 34 chrX 55342728 55342876 -111307420 + B1_Mur4 SINE Alu 1 143 -7 6 1007 479 70 0 14 chrX 55343760 55343833 -111306463 + (GA)n Simple_repeat Simple_repeat 1 72 0 6 1007 663 97 26 0 chrX 55344120 55344234 -111306062 + (TA)n Simple_repeat Simple_repeat 2 118 0 6 1007 332 348 9 100 chrX 55345041 55345126 -111305170 - Cheshire DNA MER1_type -2134 286 221 6 1007 397 305 0 9 chrX 55345126 55345232 -111305064 + PB1D10 SINE Alu 5 109 -8 6 1007 332 348 9 100 chrX 55345232 55345376 -111304920 - Cheshire DNA MER1_type -2200 220 78 6 1007 227 328 15 30 chrX 55345431 55345497 -111304799 + tRNA-Ala-GCY_ tRNA tRNA 3 67 -8 6 1007 757 303 72 24 chrX 55345719 55346010 -111304286 - MLT1A0 LTR MaLR -54 311 7 6 1007 278 306 75 74 chrX 55346640 55346866 -111303430 - MIRb SINE MIR 0 268 42 6 1007 349 215 0 0 chrX 55347049 55347114 -111303182 + B4 SINE B4 6 70 -222 6 1007 223 347 0 13 chrX 55347114 55347125 -111303171 + BC1_Mm scRNA scRNA 6 80 -72 6 1007 282 275 43 0 chrX 55347185 55347254 -111303042 + B4 SINE B4 219 290 -2 6 1007 342 0 0 0 chrX 55347287 55347325 -111302971 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1007 256 294 330 7 chrX 55348157 55348315 -111301981 + ID_B1 SINE B4 2 210 -14 6 1007 429 20 0 0 chrX 55349343 55349393 -111300903 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 1007 215 73 98 0 chrX 55349412 55349453 -111300843 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 6 1007 366 80 0 0 chrX 55349458 55349508 -111300788 + (TCC)n Simple_repeat Simple_repeat 3 52 0 6 1007 1197 74 0 0 chrX 55349524 55349672 -111300624 - B1_Mus1 SINE Alu 0 148 1 6 1007 984 87 11 1 chrX 55349695 55349842 -111300454 - B2_Mm2 SINE B2 -57 159 1 6 1007 227 179 0 0 chrX 55349953 55349992 -111300304 + CT-rich Low_complexity Low_complexity 5 43 0 6 1007 883 81 0 60 chrX 55349992 55350177 -111300119 + (TCCCC)n Simple_repeat Simple_repeat 5 178 0 6 1007 383 272 66 0 chrX 55350196 55350332 -111299964 - B1F1 SINE Alu 0 149 5 6 1007 518 250 6 89 chrX 55350691 55350871 -111299425 - RSINE1 SINE B4 0 165 1 6 1007 215 327 100 0 chrX 55351833 55351943 -111298353 - L2c LINE L2 -246 3141 3021 6 1007 476 319 92 13 chrX 55351947 55352331 -111297965 - L2a LINE L2 -171 3255 2847 6 1007 295 219 40 20 chrX 55352536 55352685 -111297611 + GA-rich Low_complexity Low_complexity 5 156 0 6 1007 1422 35 0 0 chrX 55353048 55353220 -111297076 + (TCTCC)n Simple_repeat Simple_repeat 5 176 0 6 1007 252 0 0 0 chrX 55353220 55353247 -111297049 + (TTCC)n Simple_repeat Simple_repeat 1 28 0 6 1007 494 309 0 0 chrX 55353247 55353370 -111296926 - ID_B1 SINE B4 -13 211 89 6 1007 203 284 226 3 chrX 55353467 55353655 -111296641 - MIR SINE MIR -26 242 7 6 1007 813 178 7 33 chrX 55354691 55354842 -111295454 + B1_Mus2 SINE Alu 1 147 0 6 1007 21 0 0 0 chrX 55354885 55354906 -111295390 + AT_rich Low_complexity Low_complexity 1 21 0 6 1007 802 305 9 36 chrX 55354908 55355129 -111295167 - ID_B1 SINE B4 -5 219 5 6 1007 608 312 31 5 chrX 55355259 55355452 -111294844 - MIRb SINE MIR -8 260 63 7 1007 477 0 0 0 chrX 55355525 55355578 -111294718 + (TC)n Simple_repeat Simple_repeat 2 54 0 7 1007 303 28 0 0 chrX 55355579 55355615 -111294681 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 1007 308 185 54 11 chrX 55355656 55355749 -111294547 + Lx9 LINE L1 7547 7643 -1 7 1007 28 71 0 0 chrX 55356674 55356730 -111293566 + AT_rich Low_complexity Low_complexity 1 56 0 7 1007 540 262 113 33 chrX 55356730 55356880 -111293416 - ID_B1 SINE B4 -43 181 20 7 1007 1982 148 56 31 chrX 55357547 55357824 -111292472 - ORR1B2 LTR MaLR -2 365 81 7 1007 1041 105 0 0 chrX 55357824 55357977 -111292319 + (TTCTCC)n Simple_repeat Simple_repeat 3 155 0 7 1007 972 77 27 40 chrX 55357985 55358134 -111292162 - B1_Mus1 SINE Alu 0 148 2 7 1007 1982 148 56 31 chrX 55358134 55358203 -111292093 - ORR1B2 LTR MaLR -292 75 2 7 1007 3203 81 0 0 chrX 55358596 55359040 -111291256 + L1_Mus1 LINE L1 6150 6567 0 7 1007 329 271 35 23 chrX 55359223 55359310 -111290986 + 7SLRNA srpRNA srpRNA 1 88 -226 7 1007 301 302 47 9 chrX 55359415 55359522 -111290774 + ORR1E LTR MaLR 8 118 -241 7 1007 310 242 16 0 chrX 55359818 55359942 -111290354 + (TA)n Simple_repeat Simple_repeat 2 127 0 7 1007 696 224 14 34 chrX 55359951 55360099 -111290197 - B1_Mur4 SINE Alu -3 147 3 7 1007 571 26 26 0 chrX 55360099 55360176 -111290120 + (CA)n Simple_repeat Simple_repeat 2 80 0 7 1007 423 0 0 0 chrX 55360176 55360222 -111290074 + (TA)n Simple_repeat Simple_repeat 1 47 0 7 1007 261 0 0 0 chrX 55360222 55360250 -111290046 + (GA)n Simple_repeat Simple_repeat 2 30 0 7 1007 615 27 0 0 chrX 55360692 55360765 -111289531 + (TG)n Simple_repeat Simple_repeat 1 73 0 7 1007 28 0 0 0 chrX 55360822 55360850 -111289446 + AT_rich Low_complexity Low_complexity 1 28 0 7 1007 605 299 12 35 chrX 55360904 55361077 -111289219 + ID_B1 SINE B4 2 170 -54 7 1007 985 129 0 0 chrX 55361248 55361388 -111288908 + B1_Mus1 SINE Alu 1 140 -8 7 1007 687 25 0 0 chrX 55363100 55363181 -111287115 + (TA)n Simple_repeat Simple_repeat 1 81 0 7 1007 2406 202 41 111 chrX 55363190 55363266 -111287030 - RMER19C LTR ERVK 0 611 560 7 1007 2483 96 19 21 chrX 55363266 55363638 -111286658 - L1Md_F2 LINE L1 0 6582 6212 7 1007 2406 202 41 111 chrX 55363638 55364218 -111286078 - RMER19C LTR ERVK -52 559 1 7 1007 1327 102 16 0 chrX 55364811 55364998 -111285298 + B2_Mm1t SINE B2 1 190 -3 7 1007 430 320 16 0 chrX 55365007 55365135 -111285161 + RSINE1 SINE B4 2 131 -34 7 1007 21 36 0 0 chrX 55365135 55365163 -111285133 + AT_rich Low_complexity Low_complexity 1 28 0 7 1007 206 315 61 26 chrX 55365400 55365514 -111284782 + L2 LINE L2 2658 2775 -644 7 1007 198 0 0 0 chrX 55365604 55365626 -111284670 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1007 375 279 96 14 chrX 55365690 55365908 -111284388 - MER33 DNA MER1_type 0 324 15 7 1007 2341 168 36 26 chrX 55366178 55366515 -111283781 - MTC LTR MaLR 0 421 70 7 1007 324 0 0 0 chrX 55366515 55366551 -111283745 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 7 1007 1055 61 0 0 chrX 55366551 55366683 -111283613 - B1_Mus2 SINE Alu -13 134 3 7 1007 2341 168 36 26 chrX 55366683 55366761 -111283535 - MTC LTR MaLR -352 69 2 7 1007 304 207 195 0 chrX 55366785 55366867 -111283429 - B1F SINE Alu -8 141 44 7 1007 685 243 32 87 chrX 55366919 55367088 -111283208 - B3 SINE B2 0 216 39 7 1007 940 125 6 6 chrX 55367088 55367249 -111283047 + (TCC)n Simple_repeat Simple_repeat 3 163 0 7 1007 874 129 14 7 chrX 55367249 55367389 -111282907 - B1_Mus2 SINE Alu -2 145 5 7 1007 659 243 26 104 chrX 55367389 55367439 -111282857 - B3A SINE B2 -158 40 2 7 1007 352 321 61 35 chrX 55367459 55367656 -111282640 + MER34-int LTR ERV1 4018 4219 -3988 7 1007 563 219 44 0 chrX 55367676 55367790 -111282506 - B1_Mur1 SINE Alu -1 148 30 7 1007 686 297 57 24 chrX 55367795 55368092 -111282204 + MER34-int LTR ERV1 4212 4518 -3689 7 1007 265 274 61 105 chrX 55368118 55368148 -111282148 + MT2B LTR ERVL 133 157 -444 7 1007 726 253 0 0 chrX 55368148 55368294 -111282002 + B1F SINE Alu 3 148 -1 7 1007 316 47 0 0 chrX 55368321 55368364 -111281932 - L1_Mm LINE L1 -3375 2508 2466 7 1007 1989 71 4 7 chrX 55368366 55368636 -111281660 + L1_Mus2 LINE L1 6297 6565 -1 7 1007 264 167 0 0 chrX 55368707 55368755 -111281541 + CT-rich Low_complexity Low_complexity 2 49 0 7 1007 2001 262 196 64 chrX 55368784 55369618 -111280678 + MER34-int LTR ERV1 4652 5590 -2617 7 1007 360 0 0 0 chrX 55369618 55369658 -111280638 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 7 1007 2001 262 196 64 chrX 55369658 55370020 -111280276 + MER34-int LTR ERV1 5591 6005 -2202 7 1007 327 295 201 18 chrX 55370442 55370715 -111279581 + MER34-int LTR ERV1 6274 6596 -1611 7 1007 279 279 63 93 chrX 55370727 55370922 -111279374 - MTE-int LTR MaLR -390 1190 1009 7 1007 535 294 5 11 chrX 55371013 55371199 -111279097 + MER34-int LTR ERV1 7188 7372 -835 7 1007 1113 244 89 0 chrX 55371199 55371535 -111278761 - Lx9 LINE L1 -416 7228 6863 7 1007 1094 154 85 9 chrX 55371537 55371760 -111278536 + Lx9 LINE L1 7249 7488 -156 7 1007 441 0 0 0 chrX 55371867 55371916 -111278380 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1007 345 186 58 65 chrX 55371917 55372055 -111278241 + Lx9 LINE L1 7508 7644 0 7 1007 736 170 0 0 chrX 55372172 55372284 -111278012 + B1_Mus1 SINE Alu 2 113 -35 7 1007 235 279 0 95 chrX 55372215 55372310 -111277986 + RLTR25A LTR ERVK 520 605 -498 7 1007 390 222 21 43 chrX 55372340 55372434 -111277862 + B1_Mur1 SINE Alu 52 143 -6 7 1007 189 0 0 0 chrX 55374483 55374504 -111275792 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 7 1007 252 125 15 30 chrX 55375306 55375372 -111274924 + T-rich Low_complexity Low_complexity 1 65 0 7 1007 319 228 11 32 chrX 55376006 55376101 -111274195 - L1MC4 LINE L1 -144 7898 7806 7 1007 25 31 0 0 chrX 55376501 55376533 -111273763 + AT_rich Low_complexity Low_complexity 1 32 0 7 1007 383 268 16 67 chrX 55376696 55376820 -111273476 + PB1 SINE Alu 2 119 -8 7 1007 389 302 36 74 chrX 55377079 55377195 -111273101 - L1MC4 LINE L1 0 8042 7925 7 1007 1242 54 0 0 chrX 55377195 55377343 -111272953 - B1_Mus1 SINE Alu 0 148 1 7 1007 389 302 36 74 chrX 55377343 55377453 -111272843 - L1MC4 LINE L1 -118 7924 7824 7 1007 5405 64 24 1 chrX 55377453 55378161 -111272135 - L1_Mus3 LINE L1 -4 6634 5911 7 1007 389 302 36 74 chrX 55378161 55378269 -111272027 - L1MC4 LINE L1 -219 7823 7721 7 1007 2297 143 24 73 chrX 55378431 55378883 -111271413 + RLTR23 LTR ERV1 1 430 0 7 1007 1490 231 96 8 chrX 55378963 55379347 -111270949 - MTD LTR MaLR 0 419 2 7 1007 1130 130 128 20 chrX 55379374 55379578 -111270718 + URR1A DNA MER1_type 1 226 0 7 1007 256 345 0 0 chrX 55379899 55379954 -111270342 + MER2 DNA MER2_type 1 55 -290 7 1007 249 33 0 0 chrX 55379954 55379984 -111270312 + (TA)n Simple_repeat Simple_repeat 2 31 0 7 1007 189 0 0 0 chrX 55379984 55380005 -111270291 + (TC)n Simple_repeat Simple_repeat 2 22 0 7 1007 683 257 0 0 chrX 55380032 55380168 -111270128 + ID_B1 SINE B4 88 223 -1 7 1007 731 306 103 0 chrX 55380168 55380400 -111269896 + MER2 DNA MER2_type 87 342 -3 7 1007 731 336 99 80 chrX 55380500 55380963 -111269333 + Arthur1 DNA Tip100 1 472 -3475 7 1007 1700 64 5 0 chrX 55380990 55381210 -111269086 + L1_Mus1 LINE L1 6347 6567 0 7 1007 548 312 12 20 chrX 55381417 55381672 -111268624 - Lx9 LINE L1 -185 7459 7207 7 1007 799 165 101 11 chrX 55381673 55381851 -111268445 - B2_Mm2 SINE B2 -1 194 1 7 1007 817 221 63 29 chrX 55381955 55382160 -111268136 + B3 SINE B2 5 216 0 7 1007 277 75 19 19 chrX 55382351 55382405 -111267891 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 7 1007 895 69 138 0 chrX 55382407 55382537 -111267759 - B1_Mus1 SINE Alu 0 148 1 7 1007 540 0 0 0 chrX 55382541 55382601 -111267695 + (TTTTG)n Simple_repeat Simple_repeat 1 60 0 7 1007 921 86 0 0 chrX 55382601 55382729 -111267567 + (TTTCC)n Simple_repeat Simple_repeat 3 130 0 7 1007 1253 91 192 35 chrX 55382729 55382990 -111267306 - Lx LINE L1 -12 6642 6341 7 1007 497 176 235 0 chrX 55383025 55383144 -111267152 - B1_Mur1 SINE Alu 0 149 3 7 1007 514 258 39 58 chrX 55383936 55384195 -111266101 - L1MA6 LINE L1 -1 6299 6046 7 1007 544 178 11 0 chrX 55384249 55384339 -111265957 + B1_Mus1 SINE Alu 18 108 -40 7 1007 821 119 8 0 chrX 55384329 55384455 -111265841 - B1_Mus2 SINE Alu -9 138 12 7 1007 441 232 48 48 chrX 55384333 55384478 -111265818 - ID_B1 SINE B4 -13 211 67 7 1007 342 224 35 113 chrX 55384365 55384506 -111265790 - MT2B LTR ERVL -344 257 128 7 1007 84 61 0 0 chrX 55384540 55384687 -111265609 + AT_rich Low_complexity Low_complexity 1 147 0 7 1007 1000 232 133 63 chrX 55384873 55385287 -111265009 - Lx7 LINE L1 -10 7686 7244 7 1007 535 217 85 8 chrX 55385287 55385417 -111264879 + B1_Mus2 SINE Alu 7 146 -1 7 1007 5193 204 59 40 chrX 55385482 55386471 -111263825 - Lx7 LINE L1 -466 7230 6184 7 1007 1011 244 5 14 chrX 55386471 55386687 -111263609 + B3 SINE B2 1 214 -2 7 1007 459 0 0 0 chrX 55386693 55386744 -111263552 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1007 5193 204 59 40 chrX 55386744 55386842 -111263454 - Lx7 LINE L1 -1516 6180 6092 7 1007 1180 56 0 0 chrX 55386842 55386985 -111263311 - B1_Mus2 SINE Alu -2 145 3 7 1007 5193 204 59 40 chrX 55386985 55387228 -111263068 - Lx7 LINE L1 -1605 6091 5867 7 1007 6253 155 44 43 chrX 55387226 55388559 -111261737 - Lx7 LINE L1 -126 5754 4397 7 1007 347 325 11 63 chrX 55389652 55389814 -111260482 - MIRc SINE MIR -64 198 46 7 1007 435 270 23 62 chrX 55389825 55389955 -111260341 - B1F SINE Alu 0 149 25 7 1007 378 289 70 49 chrX 55389830 55389972 -111260324 - ID_B1 SINE B4 -1 223 79 7 1007 402 323 0 0 chrX 55390012 55390108 -111260188 - PB1D10 SINE Alu -19 98 3 7 1007 208 280 0 0 chrX 55390124 55390174 -111260122 + CT-rich Low_complexity Low_complexity 3 52 0 7 1007 720 194 69 41 chrX 55390174 55390319 -111259977 - B1_Mur2 SINE Alu 0 149 1 7 1007 192 297 0 51 chrX 55390625 55390703 -111259593 + L2 LINE L2 1870 1943 -1476 7 1007 594 0 0 0 chrX 55390805 55390871 -111259425 + (TTC)n Simple_repeat Simple_repeat 3 68 0 7 1007 261 0 0 0 chrX 55390871 55390900 -111259396 + (TC)n Simple_repeat Simple_repeat 1 29 0 7 1007 369 93 0 0 chrX 55392027 55392081 -111258215 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 1007 300 111 0 0 chrX 55392092 55392137 -111258159 + (TA)n Simple_repeat Simple_repeat 2 46 0 7 1007 410 294 109 30 chrX 55392170 55392335 -111257961 - MER58C DNA MER1_type 0 215 38 7 1007 1085 92 12 0 chrX 55392572 55392735 -111257561 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 8 1007 474 150 75 0 chrX 55392737 55392817 -111257479 - B1_Mus2 SINE Alu -6 141 56 8 1007 280 119 68 0 chrX 55392939 55392998 -111257298 - RCHARR1 DNA MER1_type -183 791 729 8 1007 1113 92 7 0 chrX 55393000 55393142 -111257154 + B1_Mus1 SINE Alu 2 144 -4 8 1007 585 0 0 0 chrX 55393143 55393208 -111257088 + (GA)n Simple_repeat Simple_repeat 1 65 0 8 1007 1048 264 88 65 chrX 55393270 55393339 -111256957 - RCHARR1 DNA MER1_type -580 394 323 8 1007 1098 130 42 26 chrX 55393339 55393529 -111256767 + B2_Mm2 SINE B2 2 194 -1 8 1007 1048 264 88 65 chrX 55393529 55393844 -111256452 - RCHARR1 DNA MER1_type -652 322 1 8 1007 381 151 0 0 chrX 55393849 55393935 -111256361 + (CAAG)n Simple_repeat Simple_repeat 2 87 0 8 1007 1175 65 0 0 chrX 55393998 55394136 -111256160 + B1_Mus1 SINE Alu 2 139 -9 8 1007 315 0 0 0 chrX 55394136 55394171 -111256125 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 1007 1394 90 0 17 chrX 55394345 55394526 -111255770 + B2_Mm2 SINE B2 1 178 -17 8 1007 394 233 43 43 chrX 55395547 55395641 -111254655 - B1F1 SINE Alu -51 98 5 8 1007 313 319 80 27 chrX 55395696 55395883 -111254413 - L1MB5 LINE L1 -43 6131 5935 8 1007 361 276 0 0 chrX 55395924 55396011 -111254285 - MER5A1 DNA MER1_type -37 129 43 8 1007 718 200 229 0 chrX 55396315 55396490 -111253806 - B3 SINE B2 0 216 2 8 1007 265 333 125 21 chrX 55396763 55396907 -111253389 + MIRc SINE MIR 9 167 -101 8 1007 517 263 19 44 chrX 55397251 55397410 -111252886 + ID_B1 SINE B4 70 224 0 8 1007 933 50 0 0 chrX 55397436 55397555 -111252741 + (GGGAGA)n Simple_repeat Simple_repeat 1 119 0 8 1007 2005 171 46 30 chrX 55398150 55398351 -111251945 - ORR1D1 LTR MaLR 0 374 165 8 1007 513 0 0 0 chrX 55398351 55398408 -111251888 + (GA)n Simple_repeat Simple_repeat 2 58 0 8 1007 2005 171 46 30 chrX 55398408 55398573 -111251723 - ORR1D1 LTR MaLR -210 164 2 8 1007 233 284 15 0 chrX 55398583 55398650 -111251646 + (TG)n Simple_repeat Simple_repeat 2 69 0 8 1007 231 308 0 25 chrX 55398718 55398798 -111251498 + L1MC5 LINE L1 7813 7890 -71 8 1007 655 305 26 0 chrX 55398921 55399111 -111251185 - ID_B1 SINE B4 -9 215 21 8 1007 262 282 97 14 chrX 55399051 55399123 -111251173 - ID4_ SINE ID -4 79 2 8 1007 987 144 0 14 chrX 55399155 55399296 -111251000 + B1_Mur2 SINE Alu 4 142 -7 8 1007 255 320 0 0 chrX 55399457 55399535 -111250761 + ID4_ SINE ID 3 80 -3 8 1007 522 318 0 0 chrX 55399956 55400110 -111250186 + Lx8 LINE L1 6641 6794 -679 8 1007 1332 34 0 0 chrX 55400767 55400914 -111249382 - B1_Mus2 SINE Alu 0 147 1 8 1007 257 350 12 0 chrX 55401864 55401944 -111248352 + ID4_ SINE ID 1 81 -2 8 1007 264 299 235 17 chrX 55402075 55402087 -111248209 + ID_B1 SINE B4 80 126 -98 8 1007 342 268 12 47 chrX 55402087 55402173 -111248123 + B1F1 SINE Alu 11 93 -56 8 1007 264 299 235 17 chrX 55402173 55402194 -111248102 + ID_B1 SINE B4 127 224 0 8 1007 1215 50 170 0 chrX 55402440 55402599 -111247697 + B2_Mm2 SINE B2 2 187 -8 8 1007 286 231 36 60 chrX 55402993 55403076 -111247220 + ID4_ SINE ID 3 83 0 8 1007 597 289 22 74 chrX 55403084 55403353 -111246943 + L1MA5A LINE L1 5609 5863 -434 8 1007 228 175 0 0 chrX 55403978 55404018 -111246278 - PB1D10 SINE Alu -9 108 69 8 1007 507 282 15 0 chrX 55404207 55404338 -111245958 + Charlie4z DNA MER1_type 2 134 -33 8 1007 257 192 0 55 chrX 55404362 55404417 -111245879 + B1F SINE Alu 98 149 0 8 1007 273 169 0 0 chrX 55404928 55404987 -111245309 + (ATTG)n Simple_repeat Simple_repeat 1 59 0 8 1007 511 195 217 17 chrX 55404988 55405108 -111245188 - B1_Mus2 SINE Alu -1 146 3 8 1007 192 97 0 0 chrX 55405307 55405338 -111244958 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 1007 365 321 65 28 chrX 55406642 55406819 -111243477 + MIRb SINE MIR 59 241 -27 8 1007 531 31 0 0 chrX 55406916 55406981 -111243315 + (GA)n Simple_repeat Simple_repeat 2 66 0 8 1007 435 235 33 16 chrX 55407099 55407220 -111243076 - MIR3 SINE MIR -1 207 85 8 1007 423 0 0 0 chrX 55407818 55407865 -111242431 + (GA)n Simple_repeat Simple_repeat 1 47 0 8 1007 185 83 28 0 chrX 55408128 55408164 -111242132 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 8 1007 405 0 0 0 chrX 55410465 55410510 -111239786 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1007 330 232 20 59 chrX 55410946 55411047 -111239249 + MIR3 SINE MIR 108 204 -4 8 1007 1108 54 0 8 chrX 55412133 55412263 -111238033 - B1_Mus1 SINE Alu -19 129 1 8 1007 457 272 88 48 chrX 55412311 55412338 -111237958 - ID_B1 SINE B4 -43 249 151 8 1007 588 236 114 0 chrX 55412338 55412461 -111237835 - B1F SINE Alu -5 144 8 8 1007 457 272 88 48 chrX 55412461 55412480 -111237816 - ID_B1 SINE B4 -43 150 72 8 1007 255 302 16 48 chrX 55412676 55412693 -111237603 - B3A SINE B2 -75 123 77 8 1007 391 257 65 28 chrX 55412693 55412723 -111237573 - B4A SINE B4 -178 114 78 8 1007 681 76 0 0 chrX 55412723 55412815 -111237481 + (TTC)n Simple_repeat Simple_repeat 2 93 0 8 1007 255 302 16 48 chrX 55412815 55412892 -111237404 - B3A SINE B2 -122 76 4 8 1007 216 0 0 0 chrX 55412916 55412940 -111237356 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 1007 382 350 28 0 chrX 55413102 55413235 -111237061 + MIRc SINE MIR 13 156 -120 8 1007 246 32 0 0 chrX 55413446 55413477 -111236819 + (GA)n Simple_repeat Simple_repeat 2 32 0 8 1007 372 94 0 0 chrX 55413474 55413527 -111236769 + (GAA)n Simple_repeat Simple_repeat 3 55 0 8 1007 653 233 38 75 chrX 55413813 55413999 -111236297 + ID_B1 SINE B4 3 181 -43 8 1007 197 312 21 41 chrX 55414235 55414332 -111235964 - MIR3 SINE MIR -49 159 65 8 1007 189 147 0 0 chrX 55415625 55415659 -111234637 + (T)n Simple_repeat Simple_repeat 1 34 0 8 1007 691 301 47 14 chrX 55415753 55415965 -111234331 - ID_B1 SINE B4 -3 221 3 8 1007 315 285 5 91 chrX 55416173 55416311 -111233985 + MIRb SINE MIR 24 161 -107 8 1007 552 301 8 8 chrX 55416316 55416450 -111233846 + RSINE1 SINE B4 2 135 -30 8 1007 206 307 44 22 chrX 55416504 55416594 -111233702 + MIRb SINE MIR 155 246 -22 8 1007 574 310 8 0 chrX 55416890 55417019 -111233277 + ID_B1 SINE B4 86 215 -9 8 1007 403 313 154 48 chrX 55417085 55417545 -111232751 - L2a LINE L2 -1 3425 2917 8 1007 792 131 194 124 chrX 55417652 55417813 -111232483 - B3 SINE B2 0 216 41 8 1007 774 195 19 31 chrX 55417813 55417972 -111232324 - Lx7 LINE L1 0 7696 7540 8 1007 792 131 194 124 chrX 55417972 55418011 -111232285 - B3 SINE B2 -176 40 2 8 1007 191 268 54 0 chrX 55418074 55418130 -111232166 + MER5B DNA MER1_type 83 141 -37 8 1007 233 243 71 0 chrX 55418170 55418240 -111232056 - MIRc SINE MIR -159 109 35 8 1007 440 77 0 15 chrX 55418426 55418492 -111231804 + (TG)n Simple_repeat Simple_repeat 2 66 0 8 1007 189 107 0 0 chrX 55420941 55420969 -111229327 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 8 1007 340 271 0 20 chrX 55421429 55421527 -111228769 - MER63B DNA AcHobo -26 410 315 8 1007 626 234 41 28 chrX 55423272 55423417 -111226879 + B1_Mus2 SINE Alu 1 147 0 8 1007 23 0 0 0 chrX 55423456 55423479 -111226817 + AT_rich Low_complexity Low_complexity 1 23 0 8 1007 270 157 84 14 chrX 55423998 55424069 -111226227 - Lx9 LINE L1 0 7644 7569 8 1007 197 351 96 0 chrX 55424163 55424257 -111226039 - L2b LINE L2 -39 3336 3234 8 1007 536 301 22 0 chrX 55424295 55424431 -111225865 + B1F2 SINE Alu 1 139 -10 8 1007 651 26 0 0 chrX 55424432 55424509 -111225787 + (CAAG)n Simple_repeat Simple_repeat 2 78 0 8 1007 1021 111 40 34 chrX 55424556 55424705 -111225591 - B1_Mur4 SINE Alu 0 150 1 8 1007 635 243 0 14 chrX 55424706 55424844 -111225452 + B1_Mur1 SINE Alu 14 149 0 8 1007 311 218 11 103 chrX 55424877 55424964 -111225332 - ID4 SINE ID -3 80 2 8 1007 994 118 12 6 chrX 55425031 55425201 -111225095 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 8 1007 1260 62 7 0 chrX 55425202 55425348 -111224948 - B1_Mm SINE Alu 0 147 1 8 1007 495 285 21 8 chrX 55425764 55425911 -111224385 - B3A SINE B2 -53 163 12 8 1007 775 142 96 7 chrX 55425911 55426046 -111224250 + B1_Mur2 SINE Alu 1 147 -2 8 1007 830 183 182 6 chrX 55426132 55426313 -111223983 - B3 SINE B2 -1 215 3 8 1007 442 306 68 25 chrX 55426456 55426617 -111223679 + B3A SINE B2 21 188 -10 8 1007 4764 36 2 0 chrX 55426617 55427147 -111223149 + L1Md_F2 LINE L1 6040 6570 -12 8 1007 1117 133 0 0 chrX 55427168 55427333 -111222963 - B2_Mm2 SINE B2 -29 166 2 8 1007 712 284 0 21 chrX 55427383 55427570 -111222726 - B3A SINE B2 -15 183 1 8 1007 208 300 0 0 chrX 55428210 55428260 -111222036 + CT-rich Low_complexity Low_complexity 5 54 0 8 1007 180 0 0 0 chrX 55428277 55428297 -111221999 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8 1007 789 89 186 8 chrX 55428297 55428413 -111221883 - B1_Mus1 SINE Alu -9 139 1 8 1007 432 268 137 8 chrX 55428450 55428574 -111221722 - B1F2 SINE Alu -8 141 2 8 1007 678 196 54 61 chrX 55428619 55428766 -111221530 - B1_Mur1 SINE Alu -3 146 1 8 1007 522 239 7 50 chrX 55429144 55429280 -111221016 + B1F SINE Alu 10 147 -2 8 1007 323 330 27 27 chrX 55429569 55429681 -111220615 - PB1D10 SINE Alu -1 116 5 8 1007 592 318 43 43 chrX 55430366 55430645 -111219651 - ORR1E LTR MaLR 0 359 81 8 1007 2428 187 44 36 chrX 55431010 55431537 -111218759 + Lx9 LINE L1 6987 7517 -127 8 1007 571 126 23 16 chrX 55431537 55431666 -111218630 + (TA)n Simple_repeat Simple_repeat 1 130 0 8 1007 2663 42 0 15 chrX 55431667 55432004 -111218292 + ORR1A0 LTR MaLR 3 334 -12 8 1007 540 0 0 0 chrX 55432004 55432064 -111218232 + (TA)n Simple_repeat Simple_repeat 2 61 0 8 1007 298 270 10 40 chrX 55432178 55432282 -111218014 - ORR1E LTR MaLR -296 98 1 8 1007 300 252 122 37 chrX 55433293 55433400 -111216896 - MTEb LTR MaLR -200 179 64 9 1007 2024 219 12 85 chrX 55433435 55433950 -111216346 + RMER19C LTR ERVK 135 611 0 9 1007 275 211 0 66 chrX 55433950 55434008 -111216288 - B1F2 SINE Alu -92 57 4 9 1007 423 267 29 19 chrX 55434013 55434116 -111216180 + MLT1E LTR MaLR 311 414 -240 9 1007 1084 234 106 9 chrX 55434161 55434498 -111215798 + MTD LTR MaLR 21 419 0 9 1007 456 392 19 5 chrX 55434511 55434716 -111215580 + MLT1E LTR MaLR 437 644 -9 9 1007 806 173 43 63 chrX 55435614 55435839 -111214457 + Lx4B LINE L1 6747 7058 0 9 1007 180 200 0 0 chrX 55435968 55436008 -111214288 + T-rich Low_complexity Low_complexity 1 40 0 9 1007 2475 161 12 7 chrX 55436361 55436780 -111213516 + MTC LTR MaLR 1 421 0 9 1007 315 0 0 0 chrX 55436948 55436983 -111213313 + (TC)n Simple_repeat Simple_repeat 2 36 0 9 1007 432 200 0 0 chrX 55436983 55437073 -111213223 + (TA)n Simple_repeat Simple_repeat 2 91 0 9 1007 236 316 18 0 chrX 55437766 55437823 -111212473 - tRNA-Gly-GGY tRNA tRNA -10 64 7 9 1007 768 99 0 0 chrX 55438214 55438325 -111211971 + (TTTTC)n Simple_repeat Simple_repeat 2 112 0 9 1007 368 128 21 4 chrX 55438327 55438398 -111211898 - B1_Mus2 SINE Alu -6 141 40 9 1007 585 105 0 0 chrX 55438398 55438484 -111211812 + (TTTTC)n Simple_repeat Simple_repeat 5 90 0 9 1007 1135 90 7 0 chrX 55438484 55438629 -111211667 - B1_Mus1 SINE Alu 0 148 3 9 1007 970 171 171 0 chrX 55438663 55438856 -111211440 + URR1A DNA MER1_type 1 226 0 9 1007 742 84 0 45 chrX 55439021 55439115 -111211181 + B1_Mus2 SINE Alu 41 134 -13 9 1007 522 0 0 0 chrX 55439115 55439173 -111211123 + (CAAAA)n Simple_repeat Simple_repeat 1 58 0 9 1007 742 84 0 45 chrX 55439173 55439190 -111211106 + B1_Mus2 SINE Alu 135 147 0 9 1007 956 278 0 0 chrX 55439549 55439754 -111210542 - B3 SINE B2 -10 206 2 9 1007 26 0 0 0 chrX 55439774 55439800 -111210496 + AT_rich Low_complexity Low_complexity 1 26 0 9 1007 689 309 12 29 chrX 55439803 55439976 -111210320 - B3A SINE B2 -1 197 28 9 1007 225 308 49 24 chrX 55439980 55440103 -111210193 - MIRb SINE MIR -39 229 104 9 1007 199 204 18 36 chrX 55440242 55440298 -111209998 + MIR3 SINE MIR 154 208 0 9 1007 230 233 113 28 chrX 55440995 55441101 -111209195 - Tigger10 DNA Tigger -29 1814 1700 9 1007 583 288 57 19 chrX 55441452 55441661 -111208635 - ID_B1 SINE B4 -6 218 2 9 1007 2676 238 52 12 chrX 55441706 55442082 -111208214 + Lx8 LINE L1 6270 6675 -798 9 1007 1018 154 0 0 chrX 55442082 55442231 -111208065 - B1_Mur2 SINE Alu 0 149 1 9 1007 2676 238 52 12 chrX 55442231 55442454 -111207842 + Lx8 LINE L1 6676 6893 -580 9 1007 466 259 17 35 chrX 55442503 55442619 -111207677 + B3A SINE B2 1 114 -84 9 1007 21 0 0 0 chrX 55442938 55442959 -111207337 + AT_rich Low_complexity Low_complexity 1 21 0 9 1007 279 250 11 45 chrX 55443217 55443305 -111206991 - HAL1 LINE L1 -5 2502 2418 9 1007 29 47 0 0 chrX 55443323 55443366 -111206930 + AT_rich Low_complexity Low_complexity 1 43 0 9 1008 243 0 0 0 chrX 55443537 55443564 -111206732 + (CA)n Simple_repeat Simple_repeat 1 27 0 9 1008 375 243 0 51 chrX 55443771 55443849 -111206447 + ID4_ SINE ID 4 77 -6 9 1008 690 242 62 25 chrX 55444086 55444247 -111206049 - ID_B1 SINE B4 -5 219 53 9 1008 1770 72 12 21 chrX 55444678 55444918 -111205378 - L1_Mus3 LINE L1 0 6638 6401 9 1008 378 0 0 0 chrX 55444967 55445009 -111205287 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 9 1008 8204 42 1 1 chrX 55445011 55446186 -111204110 - L1Md_F2 LINE L1 -24 6558 5383 9 1008 2270 166 57 5 chrX 55446188 55446581 -111203715 + MTC LTR MaLR 5 407 -14 9 1008 607 300 36 28 chrX 55446584 55446729 -111203567 + Lx7 LINE L1 4523 4662 -1218 9 1008 396 0 0 0 chrX 55446729 55446773 -111203523 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 9 1008 607 300 36 28 chrX 55446773 55446877 -111203419 + Lx7 LINE L1 4663 4773 -1107 9 1008 1323 210 7 57 chrX 55446985 55447283 -111203013 - ORR1D1 LTR MaLR -90 284 2 9 1008 950 276 75 31 chrX 55447285 55447733 -111202563 + Lx7 LINE L1 5483 5974 -1670 9 1008 539 291 45 49 chrX 55447748 55448012 -111202284 + Lx7 LINE L1 7015 7277 -196 9 1008 438 20 0 0 chrX 55448246 55448297 -111201999 + (CAAG)n Simple_repeat Simple_repeat 1 51 0 9 1008 475 242 0 48 chrX 55448347 55448451 -111201845 + RSINE1 SINE B4 39 137 -28 9 1008 273 296 84 0 chrX 55448489 55448560 -111201736 + ID4 SINE ID 4 80 -3 9 1008 285 337 0 12 chrX 55448668 55448752 -111201544 + PB1D10 SINE Alu 34 116 -1 9 1008 520 294 49 0 chrX 55448838 55449001 -111201295 - MER58A DNA MER1_type 0 224 54 9 1008 266 277 20 0 chrX 55449759 55449860 -111200436 - Lx8 LINE L1 0 7473 7371 9 1008 1050 256 53 7 chrX 55449919 55450218 -111200078 - LTR82B Low_complexity ERVL -454 376 64 9 1008 231 36 0 0 chrX 55450220 55450248 -111200048 + (TA)n Simple_repeat Simple_repeat 2 29 0 9 1008 237 301 134 40 chrX 55450296 55450445 -111199851 - L1ME1 LINE L1 -14 6165 6003 9 1008 273 328 0 0 chrX 55450478 55450594 -111199702 - L1MEf LINE L1 -3709 2437 2322 9 1008 523 108 21 0 chrX 55451025 55451118 -111199178 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 9 1008 363 219 29 59 chrX 55451204 55451306 -111198990 - L1MEf LINE L1 -4103 2139 2041 9 1008 209 136 0 83 chrX 55451306 55451328 -111198968 + polypyrimidine Low_complexity Low_complexity 26 45 0 9 1008 1230 48 14 0 chrX 55451328 55451473 -111198823 - B1_Mus1 SINE Alu 0 148 2 9 1008 209 136 0 83 chrX 55451473 55451498 -111198798 + polypyrimidine Low_complexity Low_complexity 2 25 0 9 1008 5839 92 12 1 chrX 55451500 55452265 -111198031 - L1Md_F2 LINE L1 0 6582 5810 9 1008 24316 149 50 9 chrX 55452265 55458163 -111192133 + Lx LINE L1 499 6654 0 9 1008 274 184 26 0 chrX 55458163 55458239 -111192057 + (TA)n Simple_repeat Simple_repeat 2 79 0 9 1008 393 345 57 59 chrX 55458239 55458762 -111191534 - L1MEf LINE L1 -4426 1816 1295 9 1008 305 299 20 40 chrX 55458803 55458904 -111191392 - PB1D9 SINE Alu -21 99 1 9 1008 262 272 138 127 chrX 55458904 55458992 -111191304 - ID_B1 SINE B4 -119 105 16 9 1008 441 0 0 0 chrX 55459027 55459076 -111191220 + (TC)n Simple_repeat Simple_repeat 2 50 0 9 1008 342 288 182 11 chrX 55459169 55459314 -111190982 - MLT1F1 LTR MaLR -117 443 273 9 1008 1502 70 22 0 chrX 55459781 55459966 -111190330 + B2_Mm2 SINE B2 1 189 -6 9 1008 1168 83 0 13 chrX 55459979 55460137 -111190159 + Lx2 LINE L1 6558 6713 -284 9 1008 3051 33 0 3 chrX 55460137 55460475 -111189821 - IAPLTR1a_Mm LTR ERVK 0 337 1 9 1008 10359 21 3 0 chrX 55460475 55461628 -111188668 - IAPEz-int LTR ERVK 0 6481 5326 9 1008 3833 5 2 0 chrX 55461628 55462042 -111188254 - IAPEz-int LTR ERVK -1725 4756 4342 9 1008 38864 30 1 0 chrX 55462042 55468707 -111181589 - L1Md_T LINE L1 0 6585 2 9 1008 37646 18 25 6 chrX 55468707 55472974 -111177322 - IAPEz-int LTR ERVK -2127 4354 8 9 1008 3023 36 0 3 chrX 55472974 55473312 -111176984 - IAPLTR1a_Mm LTR ERVK 0 337 1 9 1008 1933 113 58 0 chrX 55473312 55473474 -111176822 + Lx2 LINE L1 6708 6869 -128 9 1008 198 0 0 0 chrX 55473474 55473496 -111176800 + (TG)n Simple_repeat Simple_repeat 1 22 0 9 1008 1933 113 58 0 chrX 55473496 55473607 -111176689 + Lx2 LINE L1 6870 6996 -1 9 1008 413 252 19 9 chrX 55473621 55473729 -111176567 - MTD LTR MaLR -299 120 12 9 1008 230 333 144 0 chrX 55473799 55473889 -111176407 + PB1D10 SINE Alu 1 103 -14 9 1008 3543 53 0 0 chrX 55473940 55474336 -111175960 + MTA_Mm LTR MaLR 1 396 0 9 1008 1254 130 16 0 chrX 55474702 55474886 -111175410 - B2_Mm2 SINE B2 -7 188 2 9 1008 4854 140 21 13 chrX 55475198 55475942 -111174354 - Lx4B LINE L1 -4 7054 6305 9 1008 219 341 140 41 chrX 55476145 55476316 -111173980 - MIR SINE MIR -47 215 28 9 1008 2365 156 54 3 chrX 55476392 55476765 -111173531 + ORR1B1 LTR MaLR 1 392 -2 9 1008 306 315 123 38 chrX 55476776 55476987 -111173309 + B4 SINE B4 1 229 -63 9 1008 458 108 0 13 chrX 55477397 55477472 -111172824 + (TA)n Simple_repeat Simple_repeat 2 75 0 9 1008 1011 250 13 57 chrX 55477933 55478234 -111172062 + Lx5 LINE L1 6744 7031 -19 9 1008 189 0 0 0 chrX 55478234 55478255 -111172041 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 9 1008 405 0 0 0 chrX 55479878 55479923 -111170373 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 9 1008 685 199 51 7 chrX 55479925 55480062 -111170234 - B1_Mur2 SINE Alu -6 143 1 9 1008 948 141 31 0 chrX 55480137 55480300 -111169996 + URR1A DNA MER1_type 59 226 0 9 1008 25 0 0 0 chrX 55480301 55480326 -111169970 + AT_rich Low_complexity Low_complexity 1 25 0 9 1008 554 306 111 38 chrX 55480560 55480876 -111169420 - MLT1A0 LTR MaLR -6 359 21 9 1008 443 240 138 8 chrX 55480991 55481121 -111169175 - B1_Mur1 SINE Alu -1 148 2 9 1008 431 281 17 34 chrX 55481709 55481827 -111168469 + RSINE1 SINE B4 44 159 -6 9 1008 2073 122 15 39 chrX 55481898 55482170 -111168126 + ORR1A2 LTR MaLR 1 269 -58 9 1008 4490 46 0 4 chrX 55482170 55482690 -111167606 + L1Md_F2 LINE L1 6064 6581 -1 9 1008 2073 122 15 39 chrX 55482690 55482750 -111167546 + ORR1A2 LTR MaLR 270 325 -2 9 1008 241 231 0 0 chrX 55482751 55482803 -111167493 + L1MEc LINE L1 1928 1979 -4421 9 1008 357 368 83 65 chrX 55482803 55483079 -111167217 + B4 SINE B4 1 281 -11 9 1008 294 143 0 0 chrX 55483088 55483151 -111167145 + (TC)n Simple_repeat Simple_repeat 1 63 0 9 1008 322 211 106 0 chrX 55483409 55483513 -111166783 + RMER5 LTR ERV1 321 435 -99 9 1008 1297 71 95 0 chrX 55483550 55483719 -111166577 + B2_Mm2 SINE B2 2 186 -9 9 1008 297 214 0 0 chrX 55483766 55483836 -111166460 + L1MEc LINE L1 2911 2980 -3339 9 1008 330 204 53 97 chrX 55483837 55483951 -111166345 + MT2B LTR ERVL 156 264 -337 9 1008 630 229 45 15 chrX 55483852 55483985 -111166311 + B1_Mus1 SINE Alu 11 147 -1 9 1008 336 221 11 34 chrX 55484095 55484184 -111166112 - B3 SINE B2 -128 88 2 9 1008 28 29 0 0 chrX 55484271 55484306 -111165990 + AT_rich Low_complexity Low_complexity 1 35 0 9 1008 931 284 94 31 chrX 55484410 55485168 -111165128 + L1M4 LINE L1 2623 3448 -2698 9 1008 232 324 0 0 chrX 55485234 55485305 -111164991 + GA-rich Low_complexity Low_complexity 5 75 0 9 1008 2918 82 0 38 chrX 55485444 55485838 -111164458 + L1Md_F2 LINE L1 6190 6568 -14 9 1008 311 333 44 25 chrX 55486162 55486322 -111163974 - HAL1-3A_ME LINE L1 -418 2440 2278 9 1008 563 209 0 18 chrX 55486375 55486487 -111163809 - B1_Mur3 SINE Alu 0 149 40 1 1008 232 234 120 60 chrX 55486534 55486634 -111163662 - L1MA6 LINE L1 -332 5968 5863 1 1008 7125 78 10 22 chrX 55489185 55490729 -111159567 + L1VL4 LINE L1 193 1724 -1835 1 1008 1339 116 0 15 chrX 55490729 55490930 -111159366 + L1Md_F2 LINE L1 6385 6582 0 1 1008 7125 64 4 26 chrX 55490930 55491051 -111159245 + L1VL4 LINE L1 1725 1845 -1714 1 1008 7303 118 34 10 chrX 55491060 55492456 -111157840 + Lx2 LINE L1 5228 6645 -352 1 1008 1308 129 67 0 chrX 55492454 55492663 -111157633 + Lx2 LINE L1 6775 6997 0 1 1008 244 234 169 0 chrX 55493198 55493275 -111157021 - MER2 DNA MER2_type -46 299 210 1 1008 339 85 0 0 chrX 55493295 55493342 -111156954 + (ATTG)n Simple_repeat Simple_repeat 1 47 0 1 1008 298 297 0 0 chrX 55493342 55493416 -111156880 - ID4_ SINE ID -8 75 2 1 1008 938 273 110 39 chrX 55493551 55493972 -111156324 + RMER13A LTR ERVK 95 588 -320 1 1008 249 133 0 43 chrX 55494146 55494193 -111156103 - MER2 DNA MER2_type -203 142 98 1 1008 347 315 120 0 chrX 55494222 55494330 -111155966 - RSINE1 SINE B4 0 165 45 1 1008 519 17 0 0 chrX 55494350 55494410 -111155886 + (TTCC)n Simple_repeat Simple_repeat 4 63 0 1 1008 303 71 0 0 chrX 55494410 55494452 -111155844 + (TCC)n Simple_repeat Simple_repeat 3 44 0 1 1008 188 384 26 33 chrX 55495168 55495319 -111154977 + MIR3 SINE MIR 38 187 -21 1 1008 875 258 43 31 chrX 55495527 55495851 -111154445 + L1MA6 LINE L1 5972 6299 -1 1 1008 753 150 78 8 chrX 55496206 55496334 -111153962 - B1_Mus2 SINE Alu 0 147 11 1 1008 437 296 41 27 chrX 55496207 55496353 -111153943 - B4 SINE B4 -68 224 77 1 1008 284 301 64 35 chrX 55496707 55496848 -111153448 + RMER15 LTR ERVL 361 505 -70 1 1008 189 300 0 0 chrX 55497752 55497792 -111152504 + MIRm SINE MIR 209 248 -28 1 1008 291 114 0 0 chrX 55498203 55498247 -111152049 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 1008 216 0 0 0 chrX 55498798 55498822 -111151474 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1008 7671 52 30 11 chrX 55498834 55499999 -111150297 - L1Md_F2 LINE L1 -2 6580 5401 1 1008 5559 72 5 3 chrX 55500000 55500783 -111149513 - L1_Mm LINE L1 -484 5399 4615 1 1008 192 360 45 9 chrX 55500829 55500941 -111149355 + MIRb SINE MIR 125 240 -28 2 1008 447 87 0 0 chrX 55501014 55501083 -111149213 + (TC)n Simple_repeat Simple_repeat 2 70 0 3 1008 243 0 0 0 chrX 55501083 55501110 -111149186 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 1008 751 227 0 8 chrX 55501113 55501246 -111149050 - RSINE1 SINE B4 -28 137 6 5 1008 244 298 61 0 chrX 55501343 55501457 -111148839 + Lx8 LINE L1 7353 7473 0 6 1008 2522 53 9 0 chrX 55501462 55501783 -111148513 + L1Md_F2 LINE L1 6258 6581 -1 7 1008 250 315 0 128 chrX 55501844 55501946 -111148350 + MER20 DNA MER1_type 128 216 -3 8 1008 1812 212 78 26 chrX 55501956 55502066 -111148230 - Lx9 LINE L1 0 7644 7527 9 1008 288 53 0 0 chrX 55502066 55502104 -111148192 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1008 1812 212 78 26 chrX 55502104 55502124 -111148172 - Lx9 LINE L1 -118 7526 7505 9 1008 2112 142 9 0 chrX 55502124 55502448 -111147848 + ORR1A2 LTR MaLR 1 327 0 1 1008 1812 212 78 26 chrX 55502448 55502902 -111147394 - Lx9 LINE L1 -140 7504 7029 9 1008 652 271 62 0 chrX 55503566 55503758 -111146538 + Lx6 LINE L1 7257 7460 0 1 1008 1628 297 83 25 chrX 55504231 55505218 -111145078 + L1M2 LINE L1 3068 4111 -2032 1 1008 420 191 53 53 chrX 55505633 55505766 -111144530 + Lx7 LINE L1 6126 6258 -1438 1 1008 2609 261 50 33 chrX 55505774 55506621 -111143675 + Lx7 LINE L1 6419 7279 -417 1 1008 263 317 36 12 chrX 55506919 55507002 -111143294 - MLT1I LTR MaLR -246 165 81 1 1008 572 210 40 98 chrX 55507519 55507693 -111142603 - RSINE1 SINE B4 0 165 2 1 1008 931 244 24 1 chrX 55508395 55508602 -111141694 + ID_B1 SINE B4 1 211 -13 1 1008 216 245 19 0 chrX 55508718 55508771 -111141525 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 1008 198 150 0 0 chrX 55509800 55509840 -111140456 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 1 1008 36193 30 0 0 chrX 55510420 55516840 -111133456 - L1Md_T LINE L1 0 6585 69 2 1008 1755 194 57 9 chrX 55517044 55517393 -111132903 - ORR1D1 LTR MaLR -8 366 1 2 1008 671 293 53 10 chrX 55517805 55518012 -111132284 + ID_B1 SINE B4 5 220 -4 2 1008 273 325 32 110 chrX 55518302 55518359 -111131937 - MLT1I LTR MaLR -2 409 357 2 1008 586 266 57 48 chrX 55518359 55518568 -111131728 + B3 SINE B2 1 211 -5 2 1008 273 325 32 110 chrX 55518568 55518728 -111131568 - MLT1I LTR MaLR -55 356 209 2 1008 752 271 40 29 chrX 55518845 55519020 -111131276 - B3 SINE B2 0 216 40 2 1008 214 255 20 0 chrX 55519210 55519261 -111131035 - L2c LINE L2 -8 3379 3328 2 1008 313 273 50 10 chrX 55519729 55519829 -111130467 + MIR SINE MIR 117 220 -42 2 1008 1161 223 75 62 chrX 55520820 55520863 -111129433 - MT2B LTR ERVL 0 601 545 2 1008 549 0 0 0 chrX 55520863 55520924 -111129372 + (TCTA)n Simple_repeat Simple_repeat 1 61 0 2 1008 1161 234 84 77 chrX 55520924 55521322 -111128974 - MT2B LTR ERVL -57 544 29 2 1008 425 215 151 8 chrX 55521411 55521508 -111128788 - MLT1A1 LTR MaLR -12 396 270 3 1008 971 113 21 0 chrX 55521508 55521650 -111128646 + B1_Mur4 SINE Alu 1 145 -5 3 1008 425 209 163 7 chrX 55521650 55521698 -111128598 - MLT1A1 LTR MaLR -117 291 243 3 1008 586 244 190 36 chrX 55521932 55522153 -111128143 + RMER15 LTR ERVL 316 570 -5 3 1008 270 0 0 0 chrX 55522169 55522199 -111128097 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1008 335 224 0 15 chrX 55522265 55522333 -111127963 - MLT1A1 LTR MaLR -322 86 20 3 1008 237 178 0 0 chrX 55522530 55522575 -111127721 + (CATATA)n Simple_repeat Simple_repeat 3 47 0 3 1008 949 110 110 52 chrX 55522648 55522669 -111127627 - B2_Mm1t SINE B2 -9 184 168 3 1008 2413 66 44 15 chrX 55522669 55523009 -111127287 - L1Md_F2 LINE L1 -14 6568 6219 3 1008 279 21 41 20 chrX 55523016 55523065 -111127231 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 3 1008 949 110 110 52 chrX 55523065 55523208 -111127088 - B2_Mm1t SINE B2 -30 163 2 3 1008 186 281 109 0 chrX 55523209 55523273 -111127023 + L2 LINE L2 2745 2815 -604 3 1008 782 239 102 13 chrX 55523377 55523691 -111126605 + L1MB3 LINE L1 5800 6141 -42 3 1008 570 154 0 0 chrX 55523691 55523821 -111126475 + (TCTA)n Simple_repeat Simple_repeat 4 133 0 4 1008 186 43 0 0 chrX 55523822 55523845 -111126451 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 1008 578 300 18 36 chrX 55523850 55524016 -111126280 - RSINE1 SINE B4 -1 164 2 4 1008 347 363 164 6 chrX 55524378 55524719 -111125577 + L1ME3A LINE L1 5661 6055 -118 4 1008 882 176 0 13 chrX 55524767 55524917 -111125379 + B1_Mur2 SINE Alu 2 149 0 4 1008 267 104 0 0 chrX 55524918 55524966 -111125330 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 4 1008 229 345 100 8 chrX 55525174 55525294 -111125002 - L2b LINE L2 -3 3372 3242 4 1008 590 304 7 0 chrX 55526414 55526562 -111123734 - B1F SINE Alu 0 149 1 4 1008 480 319 7 40 chrX 55526851 55527001 -111123295 + RSINE1 SINE B4 15 159 -6 4 1008 304 348 8 33 chrX 55527414 55527536 -111122760 - MIR3 SINE MIR -41 167 49 4 1008 331 288 47 14 chrX 55527687 55527835 -111122461 - L1MA6 LINE L1 -2 6298 6146 5 1008 243 291 7 7 chrX 55527863 55527998 -111122298 - L1MA6 LINE L1 -230 6070 5936 5 1008 366 23 0 0 chrX 55528164 55528207 -111122089 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 1008 375 247 0 0 chrX 55528781 55528854 -111121442 - ID4_ SINE ID -10 73 1 5 1008 820 258 14 23 chrX 55528858 55529076 -111121220 + MIRb SINE MIR 52 267 -1 5 1008 201 121 0 0 chrX 55529097 55529130 -111121166 + (CAT)n Simple_repeat Simple_repeat 1 33 0 5 1008 1769 136 28 135 chrX 55530843 55531048 -111119248 + RMER17C LTR ERVK 1 184 -226 5 1008 513 0 0 0 chrX 55531048 55531105 -111119191 + (TTCTC)n Simple_repeat Simple_repeat 1 57 0 5 1008 1400 34 11 0 chrX 55531105 55531282 -111119014 + (TTCTCC)n Simple_repeat Simple_repeat 2 180 0 5 1008 1769 136 28 135 chrX 55531282 55531534 -111118762 + RMER17C LTR ERVK 185 409 -1 5 1008 305 290 75 0 chrX 55532164 55532257 -111118039 - MIRm SINE MIR -14 262 163 5 1008 498 320 155 41 chrX 55533211 55533553 -111116743 - L2a LINE L2 -4 3422 3042 5 1008 260 192 36 71 chrX 55533777 55533833 -111116463 + MIRm SINE MIR 99 152 -124 6 1008 532 279 28 21 chrX 55533842 55533985 -111116311 + RSINE1 SINE B4 3 146 -19 6 1008 27 62 0 0 chrX 55534751 55534799 -111115497 + AT_rich Low_complexity Low_complexity 1 48 0 6 1008 357 342 57 48 chrX 55535045 55535275 -111115021 - L2c LINE L2 -50 3337 3106 6 1008 180 135 0 0 chrX 55536684 55536721 -111113575 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 6 1008 1174 55 7 7 chrX 55536725 55536872 -111113424 - B1_Mm SINE Alu 0 147 1 6 1008 546 295 19 29 chrX 55537058 55537264 -111113032 - MER121 Unknown Unknown -124 288 85 6 1008 180 0 0 0 chrX 55538485 55538505 -111111791 + (CTTTG)n Simple_repeat Simple_repeat 3 22 0 6 1008 180 0 0 0 chrX 55539377 55539397 -111110899 + (TTTTTA)n Simple_repeat Simple_repeat 6 25 0 6 1008 360 0 0 0 chrX 55539577 55539617 -111110679 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1008 284 286 38 0 chrX 55539619 55539727 -111110569 + MIRc SINE MIR 65 183 -85 7 1008 407 319 37 60 chrX 55539732 55539949 -111110347 - MIRb SINE MIR 0 268 57 7 1008 564 89 0 0 chrX 55540081 55540160 -111110136 + (T)n Simple_repeat Simple_repeat 1 79 0 7 1008 263 67 44 0 chrX 55540430 55540475 -111109821 + (TATG)n Simple_repeat Simple_repeat 2 48 0 7 1008 1762 212 51 33 chrX 55540476 55540929 -111109367 - Lx5 LINE L1 -14 7036 6576 7 1008 349 260 21 0 chrX 55541000 55541096 -111109200 + ORR1E LTR MaLR 6 103 -256 7 1008 2073 185 23 32 chrX 55541204 55541639 -111108657 - RLTR31_Mm LTR ERVK 0 561 131 7 1008 34032 43 0 3 chrX 55541639 55546860 -111103436 + L1Md_T LINE L1 288 5589 -297 7 1008 8483 32 0 0 chrX 55546860 55547856 -111102440 + L1Md_T LINE L1 5590 6585 0 7 1008 213 39 0 0 chrX 55547869 55547895 -111102401 + (A)n Simple_repeat Simple_repeat 1 26 0 7 1008 460 248 63 8 chrX 55547903 55548029 -111102267 - RLTR31_Mm LTR ERVK -428 133 1 7 1008 233 316 29 48 chrX 55548045 55548148 -111102148 + ORR1E LTR MaLR 279 379 0 7 1008 439 277 135 23 chrX 55548178 55548311 -111101985 + RSINE1 SINE B4 12 159 -6 7 1008 314 233 113 54 chrX 55548311 55548341 -111101955 + B2_Mm2 SINE B2 12 184 -11 8 1008 505 333 27 22 chrX 55548382 55548566 -111101730 + B3 SINE B2 26 210 -6 8 1008 4914 110 47 36 chrX 55548621 55549145 -111101151 - L1_Mur2 LINE L1 0 5877 5347 8 1008 209 33 0 32 chrX 55549145 55549176 -111101120 + (TTG)n Simple_repeat Simple_repeat 3 32 0 8 1008 4914 110 47 36 chrX 55549176 55549516 -111100780 - L1_Mur2 LINE L1 -531 5346 5003 8 1008 6619 157 22 13 chrX 55549519 55550658 -111099638 + Lx4A LINE L1 5897 7045 -13 8 1008 22 0 0 0 chrX 55550772 55550794 -111099502 + AT_rich Low_complexity Low_complexity 1 22 0 8 1008 820 337 80 23 chrX 55551012 55551470 -111098826 - Kanga1 DNA Tc2 -1248 497 4 8 1008 313 281 10 10 chrX 55551945 55552049 -111098247 + L1MB2 LINE L1 5554 5657 -532 8 1008 331 301 48 0 chrX 55552065 55552173 -111098123 + PB1D7 SINE Alu 5 119 -1 8 1008 963 296 46 44 chrX 55552196 55552670 -111097626 + L1MB2 LINE L1 5692 6166 -5 8 1008 619 227 28 21 chrX 55552874 55553018 -111097278 + B1F1 SINE Alu 4 148 -1 8 1008 233 215 32 11 chrX 55553018 55553112 -111097184 + A-rich Low_complexity Low_complexity 1 96 0 9 1008 1458 258 86 20 chrX 55553158 55553818 -111096478 - L1M2 LINE L1 -1854 4289 3586 9 1008 326 320 0 10 chrX 55553840 55553941 -111096355 - L1M2 LINE L1 -2625 3518 3419 9 1008 888 211 49 20 chrX 55553970 55554173 -111096123 + B3 SINE B2 2 210 -6 9 1008 259 129 13 24 chrX 55554215 55554267 -111096029 + PB1D9 SINE Alu 64 125 -2 9 1008 691 230 104 10 chrX 55554293 55554486 -111095810 + B3 SINE B2 2 212 -4 9 1008 298 303 97 7 chrX 55554728 55554997 -111095299 + L1M5 LINE L1 3686 3978 -2168 9 1008 2930 106 72 2 chrX 55555051 55555497 -111094799 - Lx2 LINE L1 -1 6996 6520 9 1008 5221 83 9 3 chrX 55555498 55556261 -111094035 + Lx2 LINE L1 5769 6536 -461 9 1008 432 97 0 0 chrX 55556263 55556325 -111093971 + (TTA)n Simple_repeat Simple_repeat 3 64 0 9 1008 274 285 63 43 chrX 55556355 55556457 -111093839 + L1M5 LINE L1 4082 4188 -1958 9 1008 4301 99 33 14 chrX 55556457 55557094 -111093202 + Lx LINE L1 6006 6654 0 9 1008 274 285 63 43 chrX 55557094 55557244 -111093052 + L1M5 LINE L1 4189 4338 -1808 9 1008 297 0 0 0 chrX 55557616 55557649 -111092647 + (TA)n Simple_repeat Simple_repeat 1 33 0 9 1008 223 185 18 36 chrX 55557662 55557718 -111092578 + (TATATG)n Simple_repeat Simple_repeat 5 59 0 1 1008 1047 156 98 10 chrX 55557922 55558109 -111092187 - ORR1A4 LTR MaLR -8 321 118 1 1008 2143 254 16 69 chrX 55558109 55558721 -111091575 - RMER19C LTR ERVK 0 611 32 1 1008 926 156 117 11 chrX 55558786 55558974 -111091322 - ORR1B1 LTR MaLR -186 208 1 1 1008 252 59 0 0 chrX 55559871 55559905 -111090391 + (GA)n Simple_repeat Simple_repeat 1 34 0 1 1008 1160 241 83 31 chrX 55560778 55561138 -111089158 + MTEa LTR MaLR 1 379 0 1 1008 258 194 0 46 chrX 55561954 55562019 -111088277 + MT2B2 LTR ERVL 523 584 0 1 1008 521 288 159 20 chrX 55562061 55562306 -111087990 - B4A SINE B4 -13 279 1 1 1008 454 261 11 139 chrX 55563240 55563427 -111086869 - RSINE1 SINE B4 -1 164 2 1 1008 278 275 14 28 chrX 55563827 55563913 -111086383 + L2a LINE L2 3293 3413 -13 1 1008 2156 230 35 20 chrX 55564445 55564954 -111085342 - Lx9 LINE L1 -822 6822 6306 1 1008 258 207 0 0 chrX 55564954 55565012 -111085284 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1008 684 251 19 45 chrX 55565012 55565279 -111085017 + Lx9 LINE L1 7377 7636 -8 1 1008 280 271 78 68 chrX 55565303 55565406 -111084890 + B1F1 SINE Alu 1 104 -45 1 1008 226 218 18 35 chrX 55565418 55565475 -111084821 + GA-rich Low_complexity Low_complexity 5 60 0 1 1008 1697 99 12 0 chrX 55566855 55567108 -111083188 - L1_Mus3 LINE L1 -8 6630 6375 1 1008 660 167 0 0 chrX 55567616 55567736 -111082560 + (TA)n Simple_repeat Simple_repeat 2 121 0 1 1008 983 232 37 33 chrX 55568278 55568353 -111081943 - B3 SINE B2 0 216 144 1 1008 3020 33 2 102 chrX 55568353 55568786 -111081510 + RLTR10 LTR ERVK 1 390 0 1 1008 983 232 37 33 chrX 55568786 55568924 -111081372 - B3 SINE B2 -73 143 2 1 1008 727 263 94 76 chrX 55569647 55569949 -111080347 - Lx8 LINE L1 -6 7467 7165 1 1008 4476 77 35 3 chrX 55569949 55570548 -111079748 - L1Md_F2 LINE L1 -12 6570 5953 1 1008 727 263 94 76 chrX 55570548 55570640 -111079656 - Lx8 LINE L1 -309 7164 7066 1 1008 1616 307 21 3 chrX 55570693 55571219 -111079077 - Lx8 LINE L1 -154 7319 6828 1 1008 301 258 66 22 chrX 55572696 55572787 -111077509 - MER34 LTR ERV1 -82 460 366 1 1008 209 258 248 8 chrX 55573193 55573326 -111076970 + MIR SINE MIR 54 218 -44 1 1008 1808 191 39 6 chrX 55573832 55574191 -111076105 + ORR1D1 LTR MaLR 4 374 0 1 1008 678 254 14 0 chrX 55574191 55574333 -111075963 + ORR1D1-int LTR MaLR 1 144 -1226 1 15 1428 183 89 27 chrX 55574333 55574670 -111075626 - Lx9 LINE L1 -600 7044 6687 1 1009 444 312 28 0 chrX 55574719 55574860 -111075436 + L1MC1 LINE L1 6169 6313 -20 1 1009 237 399 80 0 chrX 55575282 55575445 -111074851 + MLT1J1 LTR MaLR 91 266 -178 1 1009 292 302 18 28 chrX 55575612 55575721 -111074575 - MIRb SINE MIR -49 219 112 1 1009 844 279 5 0 chrX 55577021 55577222 -111073074 + ID_B1 SINE B4 4 205 -19 1 1009 1949 151 20 12 chrX 55577407 55577750 -111072546 - ORR1B1 LTR MaLR -8 386 41 1 1009 358 127 14 14 chrX 55577914 55577986 -111072310 + GA-rich Low_complexity Low_complexity 3 74 0 1 1009 312 189 0 0 chrX 55578739 55578813 -111071483 + (TG)n Simple_repeat Simple_repeat 2 75 0 1 1009 180 97 0 0 chrX 55579181 55579212 -111071084 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1009 196 364 71 60 chrX 55579480 55579664 -111070632 + MIR SINE MIR 50 235 -27 1 1009 434 206 78 46 chrX 55579680 55579833 -111070463 - Lx5 LINE L1 0 7050 6893 1 1009 308 381 0 7 chrX 55579872 55580007 -111070289 - L1M5 LINE L1 -453 5671 5538 1 1009 399 274 19 0 chrX 55580079 55580185 -111070111 + RMER15 LTR ERVL 403 510 -65 1 1009 191 312 31 15 chrX 55580279 55580344 -111069952 + MIRm SINE MIR 211 276 0 1 1009 219 258 119 15 chrX 55580789 55580856 -111069440 - ID4_ SINE ID -7 76 3 1 1009 780 236 7 20 chrX 55581102 55581253 -111069043 + B1_Mur2 SINE Alu 1 149 0 1 1009 283 341 51 22 chrX 55582013 55582151 -111068145 + LFSINE_Vert SINE SINE 1 142 -317 1 1009 214 281 121 22 chrX 55582666 55582757 -111067539 + MIR SINE MIR 36 135 -73 1 1009 27 62 0 0 chrX 55583056 55583104 -111067192 + AT_rich Low_complexity Low_complexity 1 48 0 1 1009 4113 72 44 0 chrX 55584293 55584887 -111065409 + L1Md_F2 LINE L1 2345 2964 -2919 1 1009 7020 35 1 0 chrX 55584898 55585768 -111064528 - L1Md_T LINE L1 0 6582 5712 1 1009 1019 24 0 0 chrX 55585768 55585892 -111064404 + L1Md_T LINE L1 5584 5707 -176 1 1009 18495 68 12 10 chrX 55585886 55588517 -111061779 + L1Md_F2 LINE L1 2950 5586 -297 1 1009 7449 72 4 9 chrX 55588517 55589518 -111060778 + L1Md_F2 LINE L1 5587 6582 0 1 1009 1199 208 95 34 chrX 55589687 55589981 -111060315 - RLTR46 LTR ERVK -5 315 4 1 1009 5308 28 37 0 chrX 55590937 55592200 -111058096 - L1Md_T LINE L1 0 6582 5252 1 1009 1695 25 0 0 chrX 55592228 55592430 -111057866 - L1Md_A LINE L1 0 6582 6381 1 1009 36159 36 1 3 chrX 55592440 55598665 -111051631 - L1Md_A LINE L1 -3 6582 277 1 1009 25 31 0 0 chrX 55599108 55599140 -111051156 + AT_rich Low_complexity Low_complexity 1 32 0 1 1009 337 310 23 0 chrX 55599164 55599248 -111051048 - RSINE1 SINE B4 -31 134 49 1 1009 9276 122 16 98 chrX 55599248 55600958 -111049338 + RLTR21 LTR ERVK 1 1569 -3 1 1009 298 296 12 47 chrX 55600958 55601011 -111049285 - RSINE1 SINE B4 -111 54 5 1 1009 36 0 0 0 chrX 55601198 55601234 -111049062 + AT_rich Low_complexity Low_complexity 1 36 0 1 1009 518 301 70 94 chrX 55601852 55602065 -111048231 - ID_B1 SINE B4 0 224 17 1 1009 565 267 27 41 chrX 55602204 55602290 -111048006 + L1M4 LINE L1 4783 4871 -1275 1 1009 1416 170 176 3 chrX 55602290 55602609 -111047687 - ORR1D1 LTR MaLR 0 374 1 1 1009 565 267 27 41 chrX 55602609 55602741 -111047555 + L1M4 LINE L1 4872 4998 -1148 1 1009 312 267 116 0 chrX 55602759 55602845 -111047451 + PB1 SINE Alu 24 119 -8 1 1009 414 266 29 29 chrX 55602877 55603051 -111047245 + L1M4 LINE L1 5011 5184 -962 1 1009 687 283 29 14 chrX 55603109 55603317 -111046979 + B3 SINE B2 4 214 -2 1 1009 203 324 245 7 chrX 55603684 55603827 -111046469 - L2a LINE L2 -331 3095 2919 1 1009 637 339 163 21 chrX 55603925 55604311 -111045985 + MLT1H LTR MaLR 86 526 -23 1 1009 472 323 110 18 chrX 55604589 55604816 -111045480 - MIRb SINE MIR -8 260 13 1 1009 405 0 0 0 chrX 55605446 55605491 -111044805 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 1 1009 1017 273 103 11 chrX 55605526 55605789 -111044507 - B4A SINE B4 -4 288 2 1 1009 225 0 0 0 chrX 55606908 55606933 -111043363 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 1009 360 0 0 0 chrX 55606933 55606972 -111043324 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1009 437 269 10 0 chrX 55607500 55607604 -111042692 - PB1D9 SINE Alu -13 107 3 1 1009 26 30 0 0 chrX 55607733 55607766 -111042530 + AT_rich Low_complexity Low_complexity 1 33 0 1 1009 2317 156 42 7 chrX 55607767 55608192 -111042104 - Lx3C LINE L1 -4 6972 6533 1 1009 1990 147 51 21 chrX 55608192 55608605 -111041691 - Lx3C LINE L1 -794 6215 5783 1 1009 2392 53 9 47 chrX 55608605 55608943 -111041353 - L1_Mus2 LINE L1 -1 6565 6241 1 1009 4604 140 26 25 chrX 55608943 55609808 -111040488 - Lx3C LINE L1 -1207 5802 5017 1 1009 6506 133 30 34 chrX 55609810 55610693 -111039603 - Lx3C LINE L1 -1495 4382 3485 1 1009 202 29 28 28 chrX 55610693 55610729 -111039567 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 1009 6506 133 30 34 chrX 55610729 55611125 -111039171 - Lx3C LINE L1 -2393 3484 3110 1 1009 719 140 0 0 chrX 55611128 55611235 -111039061 - U6 snRNA snRNA 0 107 1 1 1009 366 289 16 40 chrX 55611380 55611506 -111038790 + LTR48 LTR ERV1 1 123 -664 1 1009 243 280 29 88 chrX 55611673 55611775 -111038521 + B1F SINE Alu 6 101 -48 1 1009 3380 3 0 76 chrX 55611784 55612181 -111038115 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1009 57228 20 14 1 chrX 55612181 55618572 -111031724 + IAPEz-int LTR ERVK 8 6481 0 1 1009 3380 3 0 76 chrX 55618572 55618969 -111031327 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1009 448 365 44 15 chrX 55619457 55619663 -111030633 - MER58A DNA MER1_type -1 223 12 1 1009 767 229 5 69 chrX 55619948 55620136 -111030160 + LTR90A LTR LTR 744 919 -57 1 1009 354 23 0 0 chrX 55620167 55620210 -111030086 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1009 804 204 35 21 chrX 55622397 55622542 -111027754 - B1_Mur3 SINE Alu -1 148 2 1 1009 181 303 60 53 chrX 55622816 55622870 -111027426 - MIRb SINE MIR -61 207 151 1 1009 1378 252 46 86 chrX 55622870 55623265 -111027031 - MTE2a LTR MaLR 0 379 1 1 1009 181 303 60 53 chrX 55623265 55623360 -111026936 - MIRb SINE MIR -118 150 58 1 1009 216 199 10 0 chrX 55624278 55624326 -111025970 + MIRc SINE MIR 98 150 -118 1 1009 193 173 18 88 chrX 55624841 55624898 -111025398 - L2a LINE L2 -4 3422 3370 1 1009 5541 77 44 11 chrX 55625319 55626051 -111024245 - L1_Mus4 LINE L1 -7 6629 5874 1 1009 247 321 29 37 chrX 55626189 55626325 -111023971 - L2a LINE L2 -37 3389 3255 1 1009 336 127 0 0 chrX 55626341 55626396 -111023900 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1009 890 139 0 55 chrX 55626736 55626881 -111023415 - B1_Mur4 SINE Alu -12 138 2 1 1009 910 126 29 29 chrX 55626892 55627064 -111023232 - Lx LINE L1 -2 6652 6481 1 1009 2129 239 30 33 chrX 55627400 55627942 -111022354 - Lx5 LINE L1 -10 7040 6501 1 1009 212 386 76 30 chrX 55628093 55628592 -111021704 - L2a LINE L2 -461 2958 2437 1 1009 751 217 43 0 chrX 55628967 55629105 -111021191 + B1_Mur2 SINE Alu 5 148 -1 1 1009 248 288 0 81 chrX 55629500 55629587 -111020709 + ID4 SINE ID 3 82 -1 1 1009 531 320 38 52 chrX 55630446 55630657 -111019639 + ID_B1 SINE B4 1 208 -16 1 1009 204 226 0 0 chrX 55630752 55630805 -111019491 + T-rich Low_complexity Low_complexity 1 53 0 1 1009 370 242 287 43 chrX 55632596 55632826 -111017470 - Lx9 LINE L1 -19 7625 7340 1 1009 26 30 0 0 chrX 55633442 55633475 -111016821 + AT_rich Low_complexity Low_complexity 1 33 0 1 1009 349 294 19 38 chrX 55635017 55635123 -111015173 + B4A SINE B4 1 104 -188 1 1009 757 150 0 0 chrX 55635123 55635236 -111015060 - Lx5 LINE L1 -210 6840 6728 1 1009 420 247 66 33 chrX 55635230 55635381 -111014915 + Lx4B LINE L1 6884 7039 -19 1 1009 210 71 0 0 chrX 55635381 55635409 -111014887 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1 1009 666 340 5 5 chrX 55635413 55635620 -111014676 + B4A SINE B4 82 288 -4 1 1009 309 89 0 0 chrX 55635657 55635702 -111014594 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 1009 1104 261 27 20 chrX 55636090 55636391 -111013905 - Lx8 LINE L1 -983 6490 6188 2 1009 695 291 0 0 chrX 55636444 55636592 -111013704 - RSINE1 SINE B4 -4 161 14 2 1009 42191 4 0 0 chrX 55636825 55643195 -111007101 - L1Md_A LINE L1 0 6582 211 2 1009 567 315 147 21 chrX 55643363 55643394 -111006902 - MT2A LTR ERVL -9 592 543 2 1009 315 71 0 0 chrX 55643394 55643436 -111006860 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1009 764 259 136 91 chrX 55643436 55643834 -111006462 - MT2A LTR ERVL -59 542 1 2 1009 952 246 35 171 chrX 55643990 55644393 -111005903 + Lx8 LINE L1 6608 6955 -518 2 1009 1002 267 155 9 chrX 55644462 55644880 -111005416 + Lx8 LINE L1 6991 7469 -4 2 1009 891 0 0 0 chrX 55645542 55645641 -111004655 + (TTC)n Simple_repeat Simple_repeat 2 100 0 2 1009 237 208 0 0 chrX 55645642 55645719 -111004577 + CT-rich Low_complexity Low_complexity 2 78 0 2 1009 396 40 0 0 chrX 55645726 55645776 -111004520 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1009 351 352 71 43 chrX 55645882 55646137 -111004159 + L2 LINE L2 2582 2843 -576 2 1009 21443 145 11 9 chrX 55646142 55650076 -111000220 - L1_Mus4 LINE L1 -582 6054 2114 2 1009 989 84 16 7 chrX 55650076 55650237 -111000059 + RLTR10 LTR ERVK 1 168 -191 2 1009 2982 83 35 0 chrX 55650237 55650633 -110999663 + RLTR10-int LTR ERVK 585 994 -993 2 1009 8359 257 40 36 chrX 55650687 55655911 -110994385 + RLTR10-int LTR ERVK 738 5066 -1476 2 1009 2391 87 132 11 chrX 55655911 55656259 -110994037 + RLTR10 LTR ERVK 1 390 0 2 1009 5078 72 18 29 chrX 55656262 55657032 -110993264 - L1VL4 LINE L1 -1800 1759 998 2 1009 9475 107 8 12 chrX 55657042 55658652 -110991644 - Lx3_Mus LINE L1 -12 6997 5399 2 1009 3601 76 22 37 chrX 55658652 55659188 -110991108 + Lx3_Mus LINE L1 4873 5400 -486 2 1009 3594 93 36 25 chrX 55659182 55659798 -110990498 - L1VL4 LINE L1 -2546 1013 390 2 1009 27 0 0 0 chrX 55660157 55660184 -110990112 + AT_rich Low_complexity Low_complexity 1 27 0 2 1009 284 231 21 32 chrX 55660406 55660500 -110989796 - MLT1A1 LTR MaLR 0 408 316 2 1009 1654 161 141 17 chrX 55661075 55661429 -110988867 - RLTR9D LTR ERVK -5 398 1 2 1009 309 337 84 40 chrX 55661746 55662021 -110988275 + HERV16-int LTR ERVL 378 664 -4332 2 1009 317 43 43 0 chrX 55662109 55662155 -110988141 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 2 1009 472 367 57 47 chrX 55662215 55662744 -110987552 + HERV16-int LTR ERVL 849 1382 -3614 2 1009 330 341 30 18 chrX 55663430 55663597 -110986699 + HERV16-int LTR ERVL 2377 2545 -3216 2 1009 574 400 76 17 chrX 55663666 55664127 -110986169 + HERV16-int LTR ERVL 2545 3032 -1964 2 1009 523 263 43 21 chrX 55664183 55664323 -110985973 + B1F SINE Alu 6 148 -1 2 1009 256 319 14 0 chrX 55664359 55664428 -110985868 + ID4 SINE ID 2 71 -12 2 1009 504 132 0 0 chrX 55664852 55664935 -110985361 + (TG)n Simple_repeat Simple_repeat 2 84 0 2 1009 418 244 15 23 chrX 55665263 55665393 -110984903 + Lx6 LINE L1 7277 7405 -55 2 1009 788 291 80 41 chrX 55665458 55665823 -110984473 - MTEa LTR MaLR 0 379 1 2 1009 346 143 0 18 chrX 55666077 55666134 -110984162 - MT2A LTR ERVL -477 56 1 2 1009 183 80 0 0 chrX 55666433 55666458 -110983838 + (TTTC)n Simple_repeat Simple_repeat 4 28 0 2 1009 836 314 107 9 chrX 55666637 55666975 -110983321 - MER31B LTR ERV1 -95 371 1 2 1009 334 355 43 14 chrX 55667046 55667186 -110983110 + MLT1F2 LTR MaLR 412 555 -5 2 1009 1690 222 59 61 chrX 55667247 55667722 -110982574 - RMER19C LTR ERVK 0 611 138 2 1009 284 270 77 22 chrX 55668359 55668450 -110981846 + LTR16A LTR ERVL 352 447 -9 2 1009 872 98 8 0 chrX 55669019 55669152 -110981144 + (GGAA)n Simple_repeat Simple_repeat 3 136 0 2 1009 579 66 0 0 chrX 55669531 55669607 -110980689 + (TA)n Simple_repeat Simple_repeat 2 77 0 2 1009 6073 58 4 0 chrX 55670214 55670973 -110979323 - L1_Mus3 LINE L1 -2 6636 5875 2 1009 387 0 0 0 chrX 55670973 55671016 -110979280 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1009 7255 84 8 2 chrX 55671044 55672566 -110977730 - L1_Mus2 LINE L1 -3 6563 5031 2 1009 26 0 0 0 chrX 55672566 55672592 -110977704 + AT_rich Low_complexity Low_complexity 1 26 0 2 1009 5581 150 34 20 chrX 55672592 55673611 -110976685 - Lx4A LINE L1 -4 7054 6021 2 1009 2247 202 30 65 chrX 55673611 55673819 -110976477 - Lx5 LINE L1 -105 6945 6738 2 1009 423 0 0 0 chrX 55673819 55673866 -110976430 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1009 2247 202 30 65 chrX 55673866 55674004 -110976292 - Lx5 LINE L1 -313 6737 6602 2 1009 1059 84 21 0 chrX 55674004 55674147 -110976149 - B1_Mur4 SINE Alu -4 146 1 2 1009 2247 202 30 65 chrX 55674147 55674307 -110975989 - Lx5 LINE L1 -449 6601 6458 2 1009 7352 68 1 6 chrX 55674305 55675943 -110974353 - L1Md_F2 LINE L1 -5 6577 4948 2 1009 1301 168 8 8 chrX 55675937 55676183 -110974113 - Lx5 LINE L1 -593 6457 6212 2 1009 215 245 0 54 chrX 55676236 55676292 -110974004 - MIR3 SINE MIR -47 161 109 2 1009 223 336 70 17 chrX 55676261 55676376 -110973920 - MIRb SINE MIR -123 145 25 2 1009 1695 50 0 26 chrX 55676386 55676613 -110973683 - L1_Mus1 LINE L1 -2 6565 6345 2 1009 422 38 0 0 chrX 55676613 55676666 -110973630 + L1_Mus1 LINE L1 6222 6274 -293 2 1009 252 346 68 38 chrX 55676850 55676982 -110973314 + MER5A1 DNA MER1_type 12 147 -19 2 1009 566 142 0 17 chrX 55678612 55678727 -110971569 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 2 1009 572 307 0 12 chrX 55678750 55678915 -110971381 - RSINE1 SINE B4 0 165 3 2 1009 220 321 24 89 chrX 55679176 55679299 -110970997 - MIR SINE MIR -40 222 108 2 1009 606 109 31 15 chrX 55679307 55679437 -110970859 + GA-rich Low_complexity Low_complexity 1 132 0 2 1009 354 257 66 9 chrX 55679803 55679909 -110970387 - MIRb SINE MIR -120 148 37 2 1009 437 303 18 24 chrX 55679949 55680119 -110970177 - MIRb SINE MIR -33 235 34 2 1009 183 100 0 0 chrX 55680252 55680282 -110970014 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 2 1009 22 0 0 0 chrX 55680451 55680473 -110969823 + AT_rich Low_complexity Low_complexity 1 22 0 2 1009 219 288 24 24 chrX 55680749 55680831 -110969465 + MIR SINE MIR 89 170 -92 2 1009 252 362 142 46 chrX 55682099 55682296 -110968000 - L3 LINE CR1 -2 4487 4272 2 1009 1641 190 46 48 chrX 55683537 55683908 -110966388 + ORR1D1 LTR MaLR 3 372 -2 2 1009 2861 108 7 7 chrX 55684814 55685235 -110965061 + BGLII LTR ERVK 1 421 0 2 1009 333 0 0 0 chrX 55685423 55685460 -110964836 + (TC)n Simple_repeat Simple_repeat 1 37 0 2 1009 2662 222 86 23 chrX 55685918 55686694 -110963602 + Lx7 LINE L1 6864 7688 -8 2 1009 21 0 0 0 chrX 55686700 55686721 -110963575 + AT_rich Low_complexity Low_complexity 1 21 0 2 1009 371 38 19 0 chrX 55687150 55687203 -110963093 + (CAAAAA)n Simple_repeat Simple_repeat 1 54 0 2 1009 285 98 0 0 chrX 55687264 55687305 -110962991 + (A)n Simple_repeat Simple_repeat 1 41 0 2 1009 524 328 79 12 chrX 55687369 55687610 -110962686 + MER34 LTR ERV1 274 530 -12 2 1009 24 53 0 0 chrX 55687864 55687902 -110962394 + AT_rich Low_complexity Low_complexity 1 38 0 2 1009 2142 225 262 2 chrX 55687902 55688512 -110961784 - Lx5 LINE L1 -3 7047 6279 2 1009 757 238 18 9 chrX 55689284 55689509 -110960787 - L1M3 LINE L1 -551 5638 5412 2 1009 674 206 26 0 chrX 55689665 55689820 -110960476 - Lx9 LINE L1 -591 7053 6895 2 1009 396 197 37 15 chrX 55689821 55689955 -110960341 + Lx9 LINE L1 7505 7641 -3 2 1009 3755 167 20 8 chrX 55691738 55692455 -110957841 + L1VL2 LINE L1 430 1220 -5762 2 1009 1123 291 41 20 chrX 55692693 55693083 -110957213 - Lx8 LINE L1 -5 7468 7071 2 1009 438 320 56 51 chrX 55694077 55694291 -110956005 - B3A SINE B2 -1 215 1 2 1009 297 325 89 111 chrX 55694756 55695071 -110955225 + MLT1A LTR MaLR 67 374 0 2 1009 990 154 16 5 chrX 55695434 55695606 -110954690 + B2_Mm2 SINE B2 1 179 -37 2 1009 213 132 0 0 chrX 55695644 55695682 -110954614 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2 1009 337 378 6 44 chrX 55696152 55696310 -110953986 + L2b LINE L2 3222 3373 -2 2 1009 236 396 21 0 chrX 55696838 55696934 -110953362 + MLT1G3 LTR MaLR 92 189 -366 2 1009 637 326 97 36 chrX 55696974 55697285 -110953011 + MLT1G3 LTR MaLR 219 541 -54 2 1009 659 290 49 49 chrX 55697350 55697513 -110952783 - RSINE1 SINE B4 0 165 3 2 1009 297 286 68 0 chrX 55697643 55697733 -110952563 + MLT1E1 LTR MaLR 8 102 -552 2 1009 395 294 93 68 chrX 55700412 55700649 -110949647 + MER34 LTR ERV1 329 571 0 2 1009 285 62 35 59 chrX 55700704 55700789 -110949507 + T-rich Low_complexity Low_complexity 2 84 0 2 1009 392 285 143 42 chrX 55700791 55701007 -110949289 - MIRb SINE MIR -26 242 5 2 1009 372 22 0 0 chrX 55702198 55702243 -110948053 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1009 513 138 0 0 chrX 55702283 55702377 -110947919 + (GA)n Simple_repeat Simple_repeat 1 94 0 2 1009 383 289 139 69 chrX 55702407 55702623 -110947673 - B4A SINE B4 -59 233 3 2 1009 977 149 135 0 chrX 55703601 55703697 -110946599 + RMER1C Other Other 1097 1202 -140 2 1009 966 135 11 6 chrX 55703697 55703876 -110946420 + CT-rich Low_complexity Low_complexity 1 180 0 2 1009 977 149 135 0 chrX 55703876 55703994 -110946302 + RMER1C Other Other 1203 1339 -3 2 1009 298 328 93 99 chrX 55704812 55705134 -110945162 - ORR1D2 LTR MaLR -2 368 49 2 1009 320 311 29 10 chrX 55705305 55705409 -110944887 - MIR3 SINE MIR -37 171 66 2 1010 319 319 0 32 chrX 55706264 55706358 -110943938 - MLT1B LTR MaLR -297 93 3 2 1010 1241 48 0 0 chrX 55706756 55706903 -110943393 - B1_Mus2 SINE Alu 0 147 1 2 1010 225 0 0 0 chrX 55707573 55707598 -110942698 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1010 753 22 0 0 chrX 55708532 55708623 -110941673 + (CA)n Simple_repeat Simple_repeat 2 92 0 2 1010 195 314 133 28 chrX 55708731 55708911 -110941385 - L2 LINE L2 -800 2619 2421 2 1010 1003 128 26 82 chrX 55709377 55709572 -110940724 - B2_Mm2 SINE B2 -10 185 2 2 1010 462 320 132 21 chrX 55709577 55709877 -110940419 + MLT1G LTR MaLR 13 358 -197 2 1010 294 287 42 21 chrX 55713669 55713765 -110936531 + LTR48 LTR ERV1 1 98 -689 2 1010 1202 304 3 7 chrX 55714187 55714472 -110935824 - B4A SINE B4 -3 289 6 2 1010 323 295 116 0 chrX 55716220 55716315 -110933981 - Tigger7 DNA MER2_type -2 2489 2384 2 1010 514 362 63 52 chrX 55716322 55716414 -110933882 - ORR1E LTR MaLR -5 354 260 3 1010 243 0 0 0 chrX 55716414 55716441 -110933855 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1010 1091 81 0 0 chrX 55716442 55716578 -110933718 - B1_Mus1 SINE Alu -12 136 1 3 1010 514 362 63 52 chrX 55716578 55716830 -110933466 - ORR1E LTR MaLR -100 259 4 3 1010 501 226 89 19 chrX 55716833 55716991 -110933305 - MER44A DNA MER2_type -103 236 68 3 1010 485 181 16 0 chrX 55716991 55717118 -110933178 + CT-rich Low_complexity Low_complexity 2 130 0 3 1010 352 316 0 0 chrX 55717120 55717218 -110933078 - Tigger7 DNA MER2_type -261 2230 2133 2 1010 492 321 79 18 chrX 55717219 55717384 -110932912 - Tigger7 DNA MER2_type -2184 307 133 2 1010 527 309 43 22 chrX 55717385 55717570 -110932726 + ORR1E LTR MaLR 2 190 -169 3 1010 1195 299 61 26 chrX 55717821 55718212 -110932084 + MTD LTR MaLR 13 417 -2 3 1010 1171 296 146 80 chrX 55718218 55718942 -110931354 + MTD-int LTR MaLR 3 780 -478 3 1010 189 0 0 0 chrX 55718945 55718966 -110931330 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1010 305 224 168 0 chrX 55718966 55719073 -110931223 + MTD-int LTR MaLR 1125 1249 -9 3 1010 1618 245 12 41 chrX 55719082 55719499 -110930797 + MTD LTR MaLR 1 405 -14 3 1010 193 447 0 12 chrX 55719777 55719863 -110930433 + L2b LINE L2 3242 3326 -49 3 1010 186 43 0 0 chrX 55720089 55720112 -110930184 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1010 503 258 41 0 chrX 55720113 55720210 -110930086 - PB1D7 SINE Alu -13 107 7 3 1010 589 75 12 0 chrX 55720548 55720628 -110929668 + BC1_Mm scRNA scRNA 4 84 -68 3 1010 200 344 29 88 chrX 55720954 55721091 -110929205 + MER5B DNA MER1_type 1 129 -49 3 1010 186 133 0 0 chrX 55722510 55722540 -110927756 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1010 224 304 163 0 chrX 55724340 55724432 -110925864 - L2b LINE L2 -12 3414 3267 3 1010 936 177 109 36 chrX 55725571 55725764 -110924532 + B3 SINE B2 6 212 -4 3 1010 416 283 24 70 chrX 55725864 55726071 -110924225 - MER33 DNA MER1_type -132 192 10 3 1010 232 270 142 18 chrX 55726745 55726858 -110923438 + MIRb SINE MIR 139 265 -3 3 1010 385 229 87 58 chrX 55727930 55728138 -110922158 + L1MA7 LINE L1 5751 5964 -327 3 1010 21667 4 0 0 chrX 55728137 55730693 -110919603 + L1Md_A LINE L1 3031 5586 -297 3 1010 9027 4 0 0 chrX 55730693 55731689 -110918607 + L1Md_A LINE L1 5587 6582 0 3 1010 6300 141 27 8 chrX 55731769 55732818 -110917478 + Lx4A LINE L1 5990 7058 0 3 1010 345 257 84 6 chrX 55732831 55733053 -110917243 + L1MA7 LINE L1 6052 6294 -6 3 1010 990 132 113 80 chrX 55733870 55734188 -110916108 + L1_Mus2 LINE L1 6294 6632 -6 3 1010 1408 83 15 0 chrX 55734761 55734965 -110915331 - Lx2A LINE L1 -200 6808 6602 3 1010 717 212 19 0 chrX 55735113 55735273 -110915023 - Lx9 LINE L1 -216 7428 7266 3 1010 410 314 91 34 chrX 55735940 55736148 -110914148 - MIR SINE MIR -30 232 13 3 1010 209 274 13 27 chrX 55736529 55736604 -110913692 + (TATG)n Simple_repeat Simple_repeat 1 74 0 3 1010 302 280 34 0 chrX 55736715 55736833 -110913463 + GA-rich Low_complexity Low_complexity 1 122 0 3 1010 244 336 64 142 chrX 55736991 55737272 -110913024 + ORR1E LTR MaLR 96 354 -5 3 1010 491 319 100 0 chrX 55737274 55737553 -110912743 - L1MB4 LINE L1 -5921 686 380 3 1010 261 0 0 0 chrX 55737753 55737782 -110912514 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 3 1010 409 160 16 23 chrX 55737839 55737967 -110912329 + (TG)n Simple_repeat Simple_repeat 2 128 0 3 1010 399 322 14 77 chrX 55738212 55738417 -110911879 + MIRb SINE MIR 27 222 -46 3 1010 373 179 85 0 chrX 55738888 55738994 -110911302 - Lx9 LINE L1 -1 7643 7529 3 1010 1017 88 0 86 chrX 55739008 55739170 -110911126 - B1_Mus1 SINE Alu 0 148 1 3 1010 288 0 0 0 chrX 55739173 55739205 -110911091 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 1010 1164 101 62 6 chrX 55739205 55739384 -110910912 - B2_Mm2 SINE B2 -5 190 2 3 1010 1791 212 71 14 chrX 55739419 55739855 -110910441 - Lx9 LINE L1 -323 7321 6861 3 1010 2065 226 98 43 chrX 55739971 55740601 -110909695 + Lx9 LINE L1 6122 6786 -858 3 1010 899 178 0 7 chrX 55740617 55740764 -110909532 + B1_Mur3 SINE Alu 1 146 -3 3 1010 306 267 11 0 chrX 55741131 55741221 -110909075 + MIR SINE MIR 148 238 -24 3 1010 251 333 0 0 chrX 55741253 55741319 -110908977 - Tigger5 DNA MER2_type -8 2398 2333 3 1010 222 345 171 7 chrX 55741843 55741983 -110908313 - MIRc SINE MIR -97 171 9 3 1010 892 297 87 60 chrX 55742668 55743105 -110907191 + MER34A1 LTR ERV1 36 484 -103 3 1010 329 327 47 35 chrX 55743376 55743547 -110906749 - MIR SINE MIR -10 252 80 3 1010 1178 55 7 0 chrX 55744860 55745005 -110905291 + B1_Mus1 SINE Alu 3 148 0 3 1010 381 239 0 0 chrX 55745018 55745135 -110905161 + (TG)n Simple_repeat Simple_repeat 1 117 0 3 1010 464 333 37 90 chrX 55745135 55745463 -110904833 - B4 SINE B4 -16 276 3 3 1010 509 176 113 12 chrX 55746230 55746391 -110903905 + B2_Mm2 SINE B2 1 212 -4 3 1010 186 43 0 0 chrX 55746412 55746435 -110903861 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1010 230 224 112 29 chrX 55746480 55746650 -110903646 - Lx9 LINE L1 -4 7640 7457 3 1010 773 115 0 32 chrX 55746652 55746778 -110903518 + Lx4B LINE L1 6397 6518 -540 3 1010 378 0 0 0 chrX 55746779 55746821 -110903475 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1010 1968 118 17 67 chrX 55746843 55747189 -110903107 + ORR1A4 LTR MaLR 1 329 0 3 1010 652 273 136 36 chrX 55747219 55747610 -110902686 - L1MA6 LINE L1 -393 5907 5478 3 1010 672 229 46 0 chrX 55747620 55747751 -110902545 - B1_Mur1 SINE Alu -7 142 6 3 1010 896 152 146 0 chrX 55747758 55747922 -110902374 - B2_Mm2 SINE B2 -7 188 1 3 1010 369 262 63 0 chrX 55747922 55748048 -110902248 - L1MA6 LINE L1 -809 5491 5358 3 1010 1174 251 56 80 chrX 55748017 55748282 -110902014 - L1MA6 LINE L1 -913 5230 4989 3 1010 4188 62 2 13 chrX 55748282 55748823 -110901473 - L1_Mus1 LINE L1 -1 6566 6032 3 1010 1174 251 56 80 chrX 55748823 55749232 -110901064 - L1MA6 LINE L1 -1155 4988 4572 3 1010 976 269 52 39 chrX 55749447 55749822 -110900474 + MTD LTR MaLR 1 392 -8 3 1010 378 0 0 0 chrX 55749982 55750024 -110900272 + (GA)n Simple_repeat Simple_repeat 2 43 0 3 1010 1128 77 6 12 chrX 55750513 55750684 -110899612 + (TTCTC)n Simple_repeat Simple_repeat 5 174 0 3 1010 1132 141 20 5 chrX 55750796 55750996 -110899300 + Lx5 LINE L1 5866 6068 -982 3 1010 1460 99 0 26 chrX 55751400 55751627 -110898669 - L1_Mur2 LINE L1 -1699 4178 3958 3 1010 279 304 168 88 chrX 55751829 55752114 -110898182 + MLT1K LTR MaLR 16 323 -272 3 1010 640 159 30 0 chrX 55752338 55752470 -110897826 + Lx9 LINE L1 7502 7637 -7 3 1010 555 282 128 14 chrX 55753377 55753596 -110896700 - Tigger5 DNA MER2_type -3 2403 2160 3 1010 252 400 58 35 chrX 55753577 55753748 -110896548 - Tigger5 DNA MER2_type -2148 258 84 3 1010 293 307 47 140 chrX 55753705 55753750 -110896546 + B4 SINE B4 46 72 -220 3 1010 612 286 0 45 chrX 55753750 55753904 -110896392 + B1F SINE Alu 3 149 0 3 1010 406 265 62 56 chrX 55754247 55754391 -110895905 + RLTR23 LTR ERV1 286 430 0 3 1010 5119 120 27 79 chrX 55754923 55755861 -110894435 + RMER12 LTR ERVK 1 889 -433 3 1010 264 122 0 0 chrX 55755865 55755906 -110894390 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1010 842 171 73 11 chrX 55755938 55756115 -110894181 + RMER12 LTR ERVK 1135 1322 0 3 1010 1465 33 5 11 chrX 55756367 55756552 -110893744 + L1Md_F3 LINE L1 6386 6569 -15 3 1010 3122 37 8 8 chrX 55757396 55757780 -110892516 + L1Md_F2 LINE L1 6199 6582 0 3 1010 300 356 78 19 chrX 55757780 55757986 -110892310 + MIR SINE MIR 21 238 -24 3 1010 2844 74 5 18 chrX 55758664 55759061 -110891235 - L1Md_F2 LINE L1 -13 6569 6178 3 1010 229 420 88 44 chrX 55759458 55759889 -110890407 - LTR33 LTR ERVL -22 493 44 3 1010 344 272 49 27 chrX 55759900 55760085 -110890211 + MER53 DNA hAT 3 191 -2 3 1010 24 53 0 0 chrX 55760438 55760476 -110889820 + AT_rich Low_complexity Low_complexity 1 38 0 3 1010 24 0 0 0 chrX 55760531 55760555 -110889741 + AT_rich Low_complexity Low_complexity 1 24 0 3 1010 183 371 71 0 chrX 55760755 55760825 -110889471 - MIRm SINE MIR -42 234 160 3 1010 477 34 0 0 chrX 55760860 55760919 -110889377 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 1010 729 262 127 16 chrX 55760931 55761175 -110889121 - B4 SINE B4 -17 275 5 3 1010 287 265 0 0 chrX 55761263 55761346 -110888950 + Lx6 LINE L1 7174 7256 -204 3 1010 22723 22 1 1 chrX 55761347 55764838 -110885458 - L1Md_T LINE L1 0 6582 3091 3 1010 732 136 68 0 chrX 55764830 55764977 -110885319 - L1Md_A LINE L1 -6152 572 416 3 1010 278 294 76 0 chrX 55764979 55765071 -110885225 - MIR SINE MIR -120 142 44 3 1010 341 283 0 92 chrX 55765379 55765488 -110884808 - MTEa LTR MaLR -280 99 1 3 1010 447 100 0 0 chrX 55766091 55766161 -110884135 + (TA)n Simple_repeat Simple_repeat 2 71 0 3 1010 952 240 54 129 chrX 55766559 55767095 -110883201 + L1MA7 LINE L1 5619 6114 -177 3 1010 546 262 62 34 chrX 55767150 55767328 -110882968 - B3A SINE B2 -15 183 1 3 1010 2903 86 0 0 chrX 55767354 55767740 -110882556 - L1_Mus2 LINE L1 0 6566 6181 3 1010 432 0 0 0 chrX 55767740 55767788 -110882508 + (GA)n Simple_repeat Simple_repeat 2 49 0 3 1010 240 368 21 7 chrX 55768003 55768148 -110882148 - MER103 DNA DNA 0 166 20 3 1010 23 0 0 0 chrX 55768904 55768927 -110881369 + AT_rich Low_complexity Low_complexity 1 23 0 3 1010 1258 41 0 0 chrX 55768955 55769102 -110881194 + B1_Mm SINE Alu 1 147 0 3 1010 323 319 49 33 chrX 55769171 55769414 -110880882 - L1MA6 LINE L1 -115 6185 5939 3 1010 184 171 98 0 chrX 55769576 55769617 -110880679 - L2a LINE L2 -4 3422 3378 3 1010 245 307 85 23 chrX 55770411 55770541 -110879755 - MIRc SINE MIR -122 146 9 3 1010 189 300 12 48 chrX 55771687 55771771 -110878525 - MIR3 SINE MIR -1 207 127 3 1010 258 299 35 89 chrX 55772785 55772954 -110877342 - MIRb SINE MIR -46 222 63 3 1010 348 272 136 0 chrX 55773070 55773173 -110877123 - PB1D7 SINE Alu -1 119 3 3 1010 408 306 74 0 chrX 55773966 55774087 -110876209 - B1F SINE Alu -17 132 3 3 1010 2147 70 6 63 chrX 55774118 55774436 -110875860 - L1_Mus2 LINE L1 -3 6563 6264 3 1010 678 212 136 25 chrX 55774436 55774634 -110875662 - ID_B1 SINE B4 0 224 5 3 1010 227 250 0 0 chrX 55775040 55775084 -110875212 + polypyrimidine Low_complexity Low_complexity 4 47 0 4 1010 1317 269 22 14 chrX 55776115 55776481 -110873815 - ORR1D2 LTR MaLR 0 370 2 4 1010 213 154 0 0 chrX 55776600 55776639 -110873657 + GA-rich Low_complexity Low_complexity 2 40 0 4 1010 1470 290 56 37 chrX 55776839 55777377 -110872919 - MER44B DNA MER2_type -1 549 2 4 1010 21 0 0 0 chrX 55777475 55777496 -110872800 + AT_rich Low_complexity Low_complexity 1 21 0 4 1010 369 257 0 0 chrX 55777496 55777566 -110872730 - ID4 SINE ID -6 77 8 4 1010 317 297 98 49 chrX 55777603 55777766 -110872530 + MIRb SINE MIR 25 195 -73 4 1010 2739 28 0 6 chrX 55778045 55778367 -110871929 + L1Md_F2 LINE L1 6249 6568 -14 4 1010 466 274 115 31 chrX 55778733 55778993 -110871303 - L1MB3 LINE L1 -187 5996 5715 4 1010 347 294 45 56 chrX 55779018 55779216 -110871080 - L1M4c LINE L1 -4162 2846 2651 4 1010 1063 122 0 0 chrX 55779377 55779524 -110870772 - B1_Mus1 SINE Alu 0 148 2 4 1010 308 319 57 40 chrX 55779637 55779813 -110870483 - L1M4c LINE L1 -4595 2413 2235 4 1010 347 285 171 13 chrX 55779928 55780237 -110870059 - L1M4c LINE L1 -5109 2225 1868 4 1010 45 83 0 0 chrX 55780281 55780389 -110869907 + AT_rich Low_complexity Low_complexity 1 108 0 4 1010 339 278 33 23 chrX 55780410 55780624 -110869672 - L1M4c LINE L1 -5568 1766 1551 4 1010 284 340 14 14 chrX 55780958 55781101 -110869195 - L1M4c LINE L1 -5737 1167 1025 4 1010 5591 44 1 7 chrX 55781300 55781986 -110868310 - L1Md_F2 LINE L1 0 6582 5901 4 1010 25190 75 1 8 chrX 55781988 55786264 -110864032 - L1Md_F2 LINE L1 -3 6579 2332 4 1010 1259 135 0 0 chrX 55786254 55786454 -110863842 - L1Md_F2 LINE L1 -6055 561 362 4 1010 257 329 0 58 chrX 55786493 55786580 -110863716 - MER58C DNA MER1_type 0 215 134 4 1010 222 91 0 0 chrX 55786583 55786616 -110863680 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1010 238 320 40 13 chrX 55787034 55787186 -110863110 + L1MEf LINE L1 652 807 -5393 4 1010 358 337 29 11 chrX 55787576 55787750 -110862546 - Lx8 LINE L1 -296 7177 7001 4 1010 456 312 20 34 chrX 55787791 55787937 -110862359 + B1F2 SINE Alu 5 148 -1 4 1010 340 318 46 13 chrX 55787970 55788123 -110862173 + L1MEf LINE L1 896 1053 -5147 4 1010 388 298 72 62 chrX 55788751 55788944 -110861352 + MIRb SINE MIR 3 197 -71 4 1010 428 198 37 0 chrX 55789105 55789186 -110861110 + B4A SINE B4 4 87 -205 4 1010 651 219 156 58 chrX 55789186 55789462 -110860834 + Lx5 LINE L1 6748 7050 0 4 1010 204 40 0 0 chrX 55789464 55789489 -110860807 + (TAA)n Simple_repeat Simple_repeat 1 25 0 4 1010 195 42 0 0 chrX 55789489 55789513 -110860783 + (GGA)n Simple_repeat Simple_repeat 2 25 0 4 1010 598 276 15 70 chrX 55789517 55789716 -110860580 + B4A SINE B4 103 290 -2 4 1010 237 33 0 0 chrX 55790112 55790142 -110860154 + (CAA)n Simple_repeat Simple_repeat 2 31 0 4 1010 195 42 0 0 chrX 55790142 55790166 -110860130 + (CTA)n Simple_repeat Simple_repeat 3 26 0 4 1010 275 305 0 40 chrX 55790962 55791061 -110859235 - RMER30 DNA MER1_type -19 183 89 4 1010 1490 34 0 22 chrX 55791691 55791856 -110858440 + B2_Mm1a SINE B2 2 166 -27 4 1010 288 0 0 0 chrX 55791856 55791888 -110858408 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 4 1010 1490 34 0 22 chrX 55791888 55791904 -110858392 + B2_Mm1a SINE B2 167 179 -14 4 1010 228 231 106 49 chrX 55791906 55792029 -110858267 - Lx7 LINE L1 0 7696 7567 4 1010 367 300 51 96 chrX 55792214 55792549 -110857747 + L1M4 LINE L1 21 340 -6202 4 1010 2529 154 178 2 chrX 55792723 55793212 -110857084 + RMER15 LTR ERVL 1 575 0 4 1010 449 188 119 48 chrX 55793349 55793517 -110856779 - Lx4B LINE L1 -14 7044 6865 4 1010 509 180 117 0 chrX 55793704 55793815 -110856481 + Lx4A LINE L1 6826 6949 -109 4 1010 997 177 0 46 chrX 55794263 55794482 -110855814 - RMER17C LTR ERVK -22 388 180 4 1010 192 358 155 14 chrX 55795121 55795328 -110854968 + MIR SINE MIR 1 236 -26 4 1010 4781 194 25 25 chrX 55796054 55798014 -110852282 - Lx5 LINE L1 0 7058 5158 4 1010 4969 72 2 0 chrX 55798026 55798663 -110851633 - L1Md_F2 LINE L1 -19 6563 5926 4 1010 30189 72 3 2 chrX 55798691 55803639 -110846657 - L1Md_F2 LINE L1 -1 6581 1627 4 1010 2942 94 0 130 chrX 55803639 55804140 -110846156 - RLTR10C LTR ERVK 0 436 1 4 1010 3903 112 8 4 chrX 55804140 55804825 -110845471 - IAPEY3-int LTR ERVK 0 7680 6965 4 1010 1204 90 122 0 chrX 55804825 55805013 -110845283 - IAP-d-int LTR ERVK -1287 5255 5045 4 1010 296 53 0 0 chrX 55805011 55805049 -110845247 - RLTR10-int LTR ERVK -7319 262 225 4 1010 250 264 0 0 chrX 55805049 55805102 -110845194 - RLTR27 LTR ERVK -34 275 223 4 1010 1270 56 0 0 chrX 55805102 55805264 -110845032 - RLTR10-int LTR ERVK -1785 202 41 4 1010 3438 67 5 2 chrX 55805274 55805709 -110844587 - RLTR10C LTR ERVK 0 436 1 4 1010 2754 68 5 23 chrX 55805709 55805993 -110844303 - L1Md_A LINE L1 -4251 1632 1350 4 1010 2782 57 2 128 chrX 55805993 55806437 -110843859 - RLTR10 LTR ERVK -2 388 1 4 1010 4843 165 24 24 chrX 55806437 55807553 -110842743 - L1Md_A LINE L1 -4534 1349 238 4 1010 3533 165 9 1 chrX 55807553 55808202 -110842094 - Lx5 LINE L1 -705 5172 4519 4 1010 225 350 83 0 chrX 55808529 55808649 -110841647 + L3b LINE CR1 221 350 -132 4 1010 1621 274 79 92 chrX 55808958 55809453 -110840843 + Lx7 LINE L1 6424 6942 -754 4 1010 3300 35 5 2 chrX 55809453 55809850 -110840446 + L1Md_F2 LINE L1 6173 6570 -12 4 1010 1621 274 79 92 chrX 55809850 55810176 -110840120 + Lx7 LINE L1 6943 7234 -462 4 1010 279 0 0 0 chrX 55810282 55810313 -110839983 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 1010 7967 134 17 4 chrX 55810313 55811635 -110838661 - Lx2B LINE L1 -11 6989 5651 4 1010 1190 155 34 0 chrX 55811635 55811841 -110838455 + Lx2B LINE L1 5458 5670 -216 4 1010 310 315 29 58 chrX 55811941 55812079 -110838217 - MIR3 SINE MIR -41 167 34 4 1010 251 200 0 0 chrX 55812764 55812809 -110837487 - L2a LINE L2 -13 3413 3369 4 1010 257 293 100 33 chrX 55813082 55813202 -110837094 + MIR SINE MIR 1 128 -134 4 1010 989 141 136 0 chrX 55813888 55814086 -110836210 + URR1A DNA MER1_type 2 226 0 4 1010 1306 64 0 11 chrX 55814131 55814306 -110835990 - B2_Mm1a SINE B2 -17 176 4 4 1010 1143 198 88 108 chrX 55814312 55814660 -110835636 - MT2A LTR ERVL -130 471 1 4 1010 261 0 0 0 chrX 55814929 55814958 -110835338 + (TTAA)n Simple_repeat Simple_repeat 2 30 0 4 1010 1339 165 12 36 chrX 55814961 55815212 -110835084 - Lx4A LINE L1 -9 7049 6805 4 1010 4306 98 6 14 chrX 55815265 55815889 -110834407 + Lx2A1 LINE L1 6375 6993 -15 4 1010 324 0 0 0 chrX 55815889 55815925 -110834371 + (TAA)n Simple_repeat Simple_repeat 1 36 0 4 1010 775 325 97 4 chrX 55815980 55816227 -110834069 + B4A SINE B4 4 273 -19 4 1010 210 139 0 0 chrX 55816227 55816263 -110834033 + (TC)n Simple_repeat Simple_repeat 1 36 0 4 1010 531 276 39 5 chrX 55816839 55817043 -110833253 - L1M3 LINE L1 -430 5759 5549 4 1010 1322 271 129 13 chrX 55817043 55817500 -110832796 - MTD-int LTR MaLR -747 511 2 4 1010 1763 245 24 5 chrX 55817502 55817912 -110832384 - MTD LTR MaLR -1 418 1 4 1010 364 279 39 18 chrX 55817912 55818162 -110832134 - L1M3 LINE L1 -884 5407 5138 4 1010 207 0 0 0 chrX 55818162 55818185 -110832111 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4 1010 961 298 61 25 chrX 55818739 55819265 -110831031 - L1MA4 LINE L1 -272 6028 5484 4 1010 436 148 122 0 chrX 55819282 55819397 -110830899 - Lx9 LINE L1 -8 7636 7508 4 1010 198 0 0 0 chrX 55819678 55819700 -110830596 + (TTA)n Simple_repeat Simple_repeat 1 22 0 4 1010 27 62 0 0 chrX 55819755 55819803 -110830493 + AT_rich Low_complexity Low_complexity 1 48 0 4 1010 228 376 12 0 chrX 55819821 55819906 -110830390 - MIRc SINE MIR -145 123 38 4 1010 234 224 0 20 chrX 55819908 55819958 -110830338 - BC1_Mm scRNA scRNA -71 81 33 4 1010 181 357 0 0 chrX 55820081 55820137 -110830159 + L2a LINE L2 3340 3395 -31 4 1010 290 293 66 96 chrX 55820799 55820935 -110829361 - MIR3 SINE MIR -59 209 78 4 1010 180 221 26 117 chrX 55821030 55821107 -110829189 + L2 LINE L2 2508 2577 -842 4 1010 417 212 153 126 chrX 55821393 55821576 -110828720 + B3A SINE B2 7 194 -4 4 1010 22 56 0 0 chrX 55821876 55821912 -110828384 + AT_rich Low_complexity Low_complexity 1 36 0 4 1010 302 208 37 55 chrX 55821914 55822077 -110828219 - Lx9 LINE L1 -8 7636 7477 4 1010 629 299 0 20 chrX 55822127 55822274 -110828022 - B1_Mur1 SINE Alu -5 144 1 4 1010 3623 247 55 10 chrX 55822293 55823281 -110827015 - Lx5 LINE L1 -5 7045 6014 4 1010 5332 201 68 12 chrX 55823279 55824762 -110825534 + Lx4A LINE L1 4762 6376 -682 4 1010 3187 94 25 2 chrX 55824762 55825211 -110825085 + L1_Mus3 LINE L1 6173 6631 -7 4 1010 2779 272 148 19 chrX 55825211 55825760 -110824536 + Lx4A LINE L1 6377 6959 -91 4 1010 734 252 147 58 chrX 55826990 55827454 -110822842 - MLT1D LTR MaLR 0 505 1 4 1010 623 344 37 0 chrX 55828462 55828706 -110821590 - MLT2F LTR ERVL 0 663 411 4 1010 780 354 34 25 chrX 55828828 55829271 -110821025 - ERVL-E-int LTR ERVL -1219 4448 4002 4 1010 292 349 23 29 chrX 55829373 55829544 -110820752 - ERVL-E-int LTR ERVL -2574 3140 2971 4 1010 301 317 30 0 chrX 55829568 55829669 -110820627 - ERVL-E-int LTR ERVL -3223 2444 2341 4 1010 727 269 0 18 chrX 55830140 55830343 -110819953 - B3A SINE B2 -4 212 19 4 1010 1934 183 19 19 chrX 55830359 55830721 -110819575 - ORR1D1 LTR MaLR -10 364 3 4 1010 297 348 49 43 chrX 55830748 55830910 -110819386 - MLT2F LTR ERVL -316 347 185 4 1010 180 0 0 0 chrX 55831766 55831786 -110818510 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 4 1010 339 385 0 0 chrX 55831868 55831998 -110818298 + B1F1 SINE Alu 1 130 -19 4 1010 468 123 0 0 chrX 55831999 55832072 -110818224 + (TGAA)n Simple_repeat Simple_repeat 1 73 0 4 1010 816 200 26 24 chrX 55832220 55832412 -110817884 - B3 SINE B2 -8 187 1 4 1010 582 268 7 14 chrX 55834331 55834471 -110815825 + B1F SINE Alu 11 149 0 4 1010 200 75 0 91 chrX 55834836 55834880 -110815416 + T-rich Low_complexity Low_complexity 1 40 0 4 126 7944 28 0 0 chrX 55835720 55836692 -110813604 - L1Md_A LINE L1 -1 6581 5610 4 1011 289 89 0 0 chrX 55836689 55836734 -110813562 + L1_Mm LINE L1 1877 1921 -3962 4 1011 275 130 49 49 chrX 55837281 55837362 -110812934 - Lx7 LINE L1 -227 7469 7389 4 1011 642 60 0 0 chrX 55837457 55837540 -110812756 + (TA)n Simple_repeat Simple_repeat 1 83 0 4 1011 30 0 0 0 chrX 55837590 55837620 -110812676 + AT_rich Low_complexity Low_complexity 1 30 0 4 1011 248 191 0 0 chrX 55837647 55837694 -110812602 - L1Md_F LINE L1 -6387 132 86 4 1011 1422 86 24 5 chrX 55837694 55837905 -110812391 + L1Md_F2 LINE L1 6368 6582 0 4 1011 8864 125 20 2 chrX 55837907 55839522 -110810774 + Lx2 LINE L1 5357 6997 0 4 1011 1158 251 25 4 chrX 55839528 55839808 -110810488 - Lx7 LINE L1 -334 7362 7077 4 1011 510 264 99 7 chrX 55839987 55840128 -110810168 + MER58A DNA MER1_type 71 224 0 5 1011 193 299 24 61 chrX 55840507 55840589 -110809707 + MIR SINE MIR 77 155 -107 5 1011 750 294 106 10 chrX 55841902 55842307 -110807989 + L1MB3 LINE L1 5726 6169 -14 5 1011 417 20 0 0 chrX 55842307 55842357 -110807939 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1011 529 310 96 45 chrX 55842382 55842696 -110807600 - Lx8 LINE L1 -2 7471 7142 5 1011 543 187 27 2 chrX 55842931 55843064 -110807232 + ORR1D1 LTR MaLR 1 144 -223 5 1011 195 250 78 68 chrX 55843456 55843559 -110806737 - MIRb SINE MIR -150 118 15 5 1011 1172 55 0 0 chrX 55843710 55843856 -110806440 + B1_Mm SINE Alu 2 147 0 5 1011 283 206 0 102 chrX 55844620 55844728 -110805568 - Lx9 LINE L1 -7 7637 7541 5 1011 1524 259 26 30 chrX 55844765 55845262 -110805034 - Lx9 LINE L1 -175 7469 6975 5 1011 228 287 74 37 chrX 55845447 55845610 -110804686 + L1MC1 LINE L1 6010 6178 -155 5 1011 408 256 17 0 chrX 55845845 55845962 -110804334 + MER53 DNA hAT 6 124 -69 5 1011 211 333 0 54 chrX 55846805 55846897 -110803399 - MIRc SINE MIR -22 246 160 5 1011 6518 93 16 33 chrX 55847324 55848291 -110802005 + Lx3_Mus LINE L1 6059 7009 0 5 1011 573 257 0 0 chrX 55849256 55849369 -110800927 + MTE2b LTR MaLR 2 114 -265 5 1011 534 228 122 29 chrX 55849400 55849548 -110800748 + MTE2b LTR MaLR 236 421 0 5 1011 396 161 0 0 chrX 55849613 55849694 -110800602 + (CA)n Simple_repeat Simple_repeat 2 82 0 5 1011 536 316 32 22 chrX 55849715 55849993 -110800303 - Lx7 LINE L1 -1800 5896 5616 5 1011 1281 270 26 78 chrX 55850007 55850393 -110799903 - MTE2b LTR MaLR -13 366 1 5 1011 241 283 0 10 chrX 55850425 55850525 -110799771 + L1M LINE L1 5310 5408 -889 5 1011 1327 304 35 41 chrX 55850576 55851019 -110799277 - L1M2 LINE L1 -873 5270 4820 5 1011 1253 93 27 0 chrX 55851019 55851202 -110799094 - B2_Mm2 SINE B2 -7 188 1 5 1011 1327 304 35 41 chrX 55851202 55851565 -110798731 - L1M2 LINE L1 -1324 4819 4469 5 1011 477 278 12 6 chrX 55851871 55852041 -110798255 - L1M2 LINE L1 -3388 2755 2585 5 1011 31863 73 10 13 chrX 55852125 55857493 -110792803 + L1Md_A LINE L1 232 5586 -297 5 1011 7708 58 2 5 chrX 55857493 55858488 -110791808 + L1Md_F2 LINE L1 5588 6579 -3 5 1011 31863 54 9 7 chrX 55858488 55858503 -110791793 + L1Md_A LINE L1 5587 5599 -284 5 1011 488 222 37 0 chrX 55858697 55858805 -110791491 - PB1D9 SINE Alu 0 120 9 5 1011 279 0 42 42 chrX 55859534 55859582 -110790714 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 5 1011 1132 58 0 0 chrX 55859582 55859719 -110790577 - B1_Mus1 SINE Alu -11 137 1 5 1011 280 313 0 29 chrX 55859794 55859965 -110790331 - L1M2 LINE L1 -4446 2403 2238 5 1011 725 179 300 14 chrX 55860399 55860753 -110789543 + Lx9 LINE L1 7190 7644 0 5 1011 22 0 0 0 chrX 55861289 55861311 -110788985 + AT_rich Low_complexity Low_complexity 1 22 0 5 1011 4131 144 65 18 chrX 55861388 55862151 -110788145 - Lx2B LINE L1 -10 6990 6192 5 1011 189 200 50 0 chrX 55862412 55862452 -110787844 + L3 LINE CR1 790 831 -3658 5 1011 291 225 56 0 chrX 55863030 55863119 -110787177 - L1MA8 LINE L1 -186 6105 6012 5 1011 436 351 6 51 chrX 55863184 55863340 -110786956 - B3A SINE B2 -48 150 2 5 1011 266 309 21 11 chrX 55863344 55863439 -110786857 - RMER30 DNA MER1_type -91 111 16 5 1011 555 16 0 0 chrX 55863973 55864037 -110786259 + (TC)n Simple_repeat Simple_repeat 2 65 0 5 1011 360 0 0 0 chrX 55864037 55864076 -110786220 + (TATG)n Simple_repeat Simple_repeat 3 42 0 5 1011 728 223 93 16 chrX 55864335 55864581 -110785715 - L1MA6 LINE L1 -108 6192 5928 5 1011 654 340 16 71 chrX 55864583 55864624 -110785672 + MTD LTR MaLR 1 34 -385 5 1011 827 141 172 30 chrX 55864624 55864822 -110785474 - URR1A DNA MER1_type 0 226 1 5 1011 654 340 16 71 chrX 55864822 55865090 -110785206 + MTD LTR MaLR 35 293 -126 5 1011 676 183 53 0 chrX 55865100 55865231 -110785065 + MTD LTR MaLR 268 405 -14 5 1011 949 222 21 158 chrX 55865238 55865661 -110784635 + MTD-int LTR MaLR 1 365 -893 5 1011 1117 285 220 39 chrX 55865647 55865735 -110784561 + MTD-int LTR MaLR 791 873 -707 5 1011 1915 193 87 5 chrX 55865735 55866147 -110784149 + RLTR41 LTR ERV1 1 446 0 5 1011 1133 245 199 36 chrX 55866147 55866727 -110783569 + MTD-int LTR MaLR 659 1580 0 5 1011 399 289 13 101 chrX 55866724 55866882 -110783414 + MTD LTR MaLR 1 144 -275 5 1011 2376 39 74 0 chrX 55866894 55867205 -110783091 - MTB LTR MaLR -1 399 66 5 1011 1009 240 108 35 chrX 55867156 55867477 -110782819 + MTD LTR MaLR 63 405 -14 5 1011 464 284 25 15 chrX 55867487 55867691 -110782605 - L1MA6 LINE L1 -375 5925 5720 5 1011 494 317 82 39 chrX 55868104 55868383 -110781913 - B4A SINE B4 0 292 2 5 1011 610 308 20 15 chrX 55868510 55868714 -110781582 - ID_B1 SINE B4 0 224 20 5 1011 341 341 36 7 chrX 55869372 55869511 -110780785 - B1F1 SINE Alu -5 144 2 5 1011 1066 76 7 46 chrX 55870235 55870387 -110779909 + B1_Mus2 SINE Alu 1 146 -1 5 1011 186 156 0 0 chrX 55870388 55870433 -110779863 + A-rich Low_complexity Low_complexity 1 45 0 5 1011 396 0 0 0 chrX 55870472 55870516 -110779780 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1011 267 305 41 30 chrX 55870620 55870789 -110779507 + L2 LINE L2 2471 2641 -778 5 1011 341 117 17 0 chrX 55870850 55870910 -110779386 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 1011 305 310 14 72 chrX 55871134 55871273 -110779023 + L2 LINE L2 2692 2822 -597 5 1011 2635 77 78 23 chrX 55871881 55872280 -110778016 - BGLII LTR ERVK 0 421 1 5 1011 644 281 120 14 chrX 55872946 55873303 -110776993 - L1MA4 LINE L1 -391 5909 5515 5 1011 445 167 167 0 chrX 55873833 55873929 -110776367 - Lx2B LINE L1 -435 6565 6454 5 1011 2213 150 51 28 chrX 55873929 55874362 -110775934 + Lx2B LINE L1 6554 6996 -4 5 1011 325 309 225 44 chrX 55874844 55875071 -110775225 + MLT1A0 LTR MaLR 40 307 -58 5 1011 185 315 11 63 chrX 55875127 55875222 -110775074 - L2a LINE L2 -2 3424 3335 5 1011 392 312 32 65 chrX 55875342 55875496 -110774800 - MER58A DNA MER1_type -29 195 47 5 1011 205 350 75 37 chrX 55875507 55875614 -110774682 - L2a LINE L2 -344 3075 2965 5 1011 288 263 6 57 chrX 55875634 55875740 -110774556 - ORR1E LTR MaLR -18 378 240 5 1011 182 156 0 22 chrX 55875822 55875868 -110774428 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 5 1011 255 331 150 30 chrX 55875958 55876297 -110773999 - L2a LINE L2 -516 2903 2524 5 1011 279 0 0 0 chrX 55876728 55876759 -110773537 + (TC)n Simple_repeat Simple_repeat 1 31 0 5 1011 342 0 0 0 chrX 55876759 55876796 -110773500 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1011 656 267 28 28 chrX 55877456 55877672 -110772624 - L1M4 LINE L1 -478 5706 5491 5 1011 180 0 0 0 chrX 55877686 55877706 -110772590 + (TTA)n Simple_repeat Simple_repeat 2 21 0 5 1011 387 0 0 0 chrX 55877984 55878027 -110772269 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1011 673 239 200 9 chrX 55878121 55878341 -110771955 - Lx8 LINE L1 -172 7301 7040 5 1011 17306 129 20 17 chrX 55878365 55880552 -110769744 - Lx LINE L1 0 6654 4444 5 1011 5660 58 19 4 chrX 55880552 55881277 -110769019 - L1Md_F2 LINE L1 -2 6580 5845 5 1011 17306 154 14 11 chrX 55881277 55883094 -110767202 - Lx LINE L1 -1440 4443 2639 5 1011 2023 87 0 0 chrX 55886044 55886332 -110763964 - Lx LINE L1 -3415 2468 2181 5 1011 6871 101 8 32 chrX 55886333 55887425 -110762871 + Lx LINE L1 5589 6654 0 5 1011 1890 206 66 8 chrX 55887513 55887909 -110762387 + MTD LTR MaLR 1 419 0 5 1011 548 190 24 40 chrX 55888103 55888229 -110762067 - MT2A LTR ERVL -327 206 83 5 1011 696 215 0 37 chrX 55888214 55888349 -110761947 - MT2A LTR ERVL -401 132 3 5 1011 558 262 45 39 chrX 55888763 55888942 -110761354 + ORR1E LTR MaLR 2 181 -178 5 1011 387 83 0 0 chrX 55888971 55889031 -110761265 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1011 238 156 27 135 chrX 55889032 55889106 -110761190 - RMER12 LTR ERVK -542 780 715 5 1011 1109 143 10 15 chrX 55889117 55889129 -110761167 - RMER12 LTR ERVK -591 731 720 5 1011 1234 34 7 0 chrX 55889129 55889275 -110761021 - B1_Mm SINE Alu 0 147 1 5 1011 1109 143 10 15 chrX 55889275 55889459 -110760837 - RMER12 LTR ERVK -603 719 536 5 1011 5496 147 5 87 chrX 55889459 55890430 -110759866 + RMER19B LTR ERVK 1 892 -10 5 1011 3066 143 26 9 chrX 55890434 55890963 -110759333 - RMER12 LTR ERVK -784 538 1 5 1011 575 237 35 28 chrX 55891193 55891334 -110758962 + B1_Mur4 SINE Alu 6 141 -9 5 1011 836 250 43 65 chrX 55891355 55891517 -110758779 - MTE2a LTR MaLR -2 377 221 5 1011 261 0 0 0 chrX 55891517 55891546 -110758750 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 1011 836 250 43 65 chrX 55891546 55891614 -110758682 - MTE2a LTR MaLR -159 220 152 5 1011 375 230 106 35 chrX 55891676 55891855 -110758441 - RLTR13D3 LTR ERVK 0 1114 839 5 1011 954 113 0 14 chrX 55891866 55892010 -110758286 + RLTR1C LTR ERV1 362 503 0 5 1011 1252 162 2 40 chrX 55892010 55892452 -110757844 + MMERGLN-int LTR ERV1 1 398 -7158 5 1011 413 74 196 69 chrX 55892432 55892534 -110757762 + RLTR1B-int LTR ERV1 266 380 -2919 5 1011 189 132 0 0 chrX 55892566 55892604 -110757692 + (TCTG)n Simple_repeat Simple_repeat 2 39 0 5 1011 13491 122 10 17 chrX 55892965 55895224 -110755072 - L1_Mm LINE L1 -531 5352 3109 5 1011 2157 101 126 6 chrX 55895224 55895572 -110754724 + RLTR10 LTR ERVK 1 390 0 5 1011 13491 122 10 17 chrX 55895572 55895629 -110754667 - L1_Mm LINE L1 -2775 3108 3052 5 1011 720 111 0 0 chrX 55895630 55895738 -110754558 + (TCC)n Simple_repeat Simple_repeat 2 109 0 5 1011 278 137 0 0 chrX 55895738 55895789 -110754507 - MusHAL1 LINE L1 -869 1843 1793 5 1011 3924 91 5 7 chrX 55895789 55896352 -110753944 - L1_Mus3 LINE L1 0 6638 6077 5 1011 4310 102 12 0 chrX 55896352 55897249 -110753047 + L1_Mus3 LINE L1 5179 6088 -550 5 1011 7063 163 14 56 chrX 55897241 55898797 -110751499 - L1_Mm LINE L1 -2869 3014 1524 5 1011 7281 66 0 2 chrX 55898800 55899970 -110750326 - L1Md_F2 LINE L1 -19 6563 5397 5 1011 4648 107 31 0 chrX 55899996 55900923 -110749373 - L1VL2 LINE L1 -2377 1238 283 5 1011 1116 43 0 0 chrX 55900933 55901071 -110749225 + (TTTCC)n Simple_repeat Simple_repeat 4 141 0 5 1011 477 148 0 0 chrX 55901071 55901152 -110749144 + (TTTC)n Simple_repeat Simple_repeat 1 81 0 5 1011 247 49 24 0 chrX 55901153 55901194 -110749102 - B1_Mus2 SINE Alu 0 147 106 5 1011 581 263 127 7 chrX 55901296 55901438 -110748858 + L1M3 LINE L1 4433 4577 -1563 5 1011 1489 191 115 20 chrX 55901438 55901785 -110748511 - ORR1C2 LTR MaLR 0 384 5 5 1011 581 263 127 7 chrX 55901785 55901933 -110748363 + L1M3 LINE L1 4578 4757 -1383 5 1011 313 319 18 9 chrX 55901993 55902107 -110748189 - L1M4 LINE L1 -6325 217 103 5 1011 630 273 16 11 chrX 55902129 55902314 -110747982 - B3A SINE B2 -10 188 3 5 1011 983 215 48 10 chrX 55902343 55902550 -110747746 - B3 SINE B2 0 216 2 5 1011 1118 167 74 48 chrX 55902650 55902921 -110747375 - Lx5 LINE L1 -3 7047 6770 5 1011 309 394 125 49 chrX 55903358 55903790 -110746506 + LTR16B1 LTR ERVL 16 480 0 5 1011 434 212 0 106 chrX 55903826 55903958 -110746338 + PB1D9 SINE Alu 3 120 0 5 1011 1231 92 69 0 chrX 55904369 55904543 -110745753 + B2_Mm2 SINE B2 1 186 -9 5 1011 328 350 39 31 chrX 55904675 55904802 -110745494 + AmnSINE1 SINE SINE 89 216 -359 5 1011 184 329 31 123 chrX 55905223 55905386 -110744910 - L2c LINE L2 -35 3352 3205 6 1011 288 408 90 35 chrX 55907893 55908236 -110742060 + LTR16A LTR ERVL 90 451 0 6 1011 333 0 0 0 chrX 55908691 55908728 -110741568 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 1011 420 20 0 0 chrX 55908809 55908858 -110741438 + (TC)n Simple_repeat Simple_repeat 1 49 0 6 1011 315 0 0 0 chrX 55908858 55908892 -110741404 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 1011 840 106 0 47 chrX 55908892 55909021 -110741275 - B2_Mm2 SINE B2 -71 124 2 6 1011 1210 330 35 24 chrX 55909033 55909695 -110740601 - Lx8 LINE L1 0 7473 6805 6 1011 538 242 11 5 chrX 55909739 55909926 -110740370 - L1_Mur3 LINE L1 -1435 4445 4258 6 1011 1111 307 23 0 chrX 55909926 55910278 -110740018 - Lx8 LINE L1 -740 6733 6374 6 1011 381 301 6 37 chrX 55910360 55910522 -110739774 - Lx8 LINE L1 -1472 6001 5845 6 1011 411 268 8 0 chrX 55910521 55910644 -110739652 + L1_Mur3 LINE L1 3900 4023 -1857 6 1011 2248 245 143 35 chrX 55910657 55911614 -110738682 + L1_Mur3 LINE L1 4683 5742 -138 6 1011 3038 11 0 0 chrX 55911609 55911969 -110738327 + L1Md_T LINE L1 5227 5586 -297 6 1011 8370 37 0 0 chrX 55911969 55912964 -110737332 + L1Md_T LINE L1 5587 6581 -1 6 1011 360 330 10 20 chrX 55913088 55913190 -110737106 + PB1 SINE Alu 2 102 -25 6 1011 517 299 16 0 chrX 55913849 55913976 -110736320 + RSINE1 SINE B4 3 131 -34 6 1011 267 122 0 0 chrX 55913989 55914038 -110736258 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1011 564 53 0 0 chrX 55914041 55914117 -110736179 + (CA)n Simple_repeat Simple_repeat 1 76 0 6 1011 2190 96 9 6 chrX 55914148 55914517 -110735779 - Lx2 LINE L1 -1091 5906 5531 6 1011 378 154 65 21 chrX 55914499 55914592 -110735704 + Lx2A1 LINE L1 6350 6446 -562 6 1011 4425 126 4 12 chrX 55914612 55915293 -110735003 + Lx2 LINE L1 6322 6997 0 6 1011 927 52 0 0 chrX 55915311 55915427 -110734869 + B1_Mus2 SINE Alu 26 141 -6 6 1011 374 39 19 0 chrX 55915431 55915483 -110734813 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 6 1011 189 0 0 0 chrX 55915513 55915534 -110734762 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 6 1011 21 57 0 0 chrX 55916216 55916251 -110734045 + AT_rich Low_complexity Low_complexity 1 35 0 6 1011 465 323 31 31 chrX 55916429 55916589 -110733707 - RSINE1 SINE B4 -4 161 2 6 1011 754 312 39 14 chrX 55917432 55917712 -110732584 + B4A SINE B4 3 289 -3 6 1011 1359 252 54 20 chrX 55917845 55918197 -110732099 + ORR1D2 LTR MaLR 5 368 -2 6 1011 234 81 0 0 chrX 55918510 55918547 -110731749 + (A)n Simple_repeat Simple_repeat 1 37 0 6 1011 228 265 42 25 chrX 55919311 55919431 -110730865 + L1MA10 LINE L1 6199 6320 -14 6 1011 781 213 0 7 chrX 55919497 55919648 -110730648 - B1_Mur4 SINE Alu 0 150 1 6 1011 239 328 129 0 chrX 55919783 55919899 -110730397 - MIRc SINE MIR -98 170 40 6 1011 1007 261 77 110 chrX 55920029 55920421 -110729875 + MTE2a LTR MaLR 1 379 0 6 1011 297 0 0 0 chrX 55920558 55920591 -110729705 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 1011 472 282 160 22 chrX 55921535 55921854 -110728442 + L1MC4 LINE L1 7420 7782 -260 6 1011 372 136 34 0 chrX 55922010 55922098 -110728198 + (TA)n Simple_repeat Simple_repeat 1 91 0 6 1011 291 114 0 0 chrX 55922245 55922289 -110728007 + (TTG)n Simple_repeat Simple_repeat 2 45 0 6 1011 456 306 13 59 chrX 55922294 55922447 -110727849 - B1F SINE Alu -3 146 1 6 1011 333 294 22 114 chrX 55922447 55922480 -110727816 - ID SINE ID -156 68 53 6 1011 754 80 79 16 chrX 55922507 55922634 -110727662 - L1_Mur1 LINE L1 -649 5237 5103 6 1011 440 204 10 0 chrX 55922634 55922737 -110727559 + Lx3C LINE L1 6871 6974 -2 6 1011 638 169 0 17 chrX 55922999 55923119 -110727177 - URR1B DNA MER1_type 0 225 108 6 1011 491 256 167 43 chrX 55923122 55923454 -110726842 - RLTR22_Mur LTR ERVK 0 1848 1549 6 1011 1050 229 38 30 chrX 55923536 55923801 -110726495 - RLTR22_Mur LTR ERVK -1581 267 1 6 1011 3010 69 24 19 chrX 55924068 55924512 -110725784 - L1_Mus2 LINE L1 0 6566 6151 6 1011 351 0 0 0 chrX 55924658 55924697 -110725599 + (TAA)n Simple_repeat Simple_repeat 1 39 0 6 1011 1782 314 102 31 chrX 55924705 55925705 -110724591 - Lx8 LINE L1 -153 7320 6250 6 1011 183 129 0 0 chrX 55925747 55925778 -110724518 + (A)n Simple_repeat Simple_repeat 1 31 0 6 1011 251 259 86 0 chrX 55925893 55925974 -110724322 - MIR SINE MIR 0 262 175 6 1011 395 333 30 18 chrX 55926250 55926418 -110723878 + MIRb SINE MIR 99 268 0 6 1011 285 29 0 0 chrX 55927385 55927419 -110722877 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 1011 207 0 0 0 chrX 55927419 55927441 -110722855 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1011 426 324 35 74 chrX 55927764 55927945 -110722351 + MLT1C LTR MaLR 246 412 -55 6 1011 1068 54 0 26 chrX 55927945 55927956 -110722340 - L1Md_F2 LINE L1 -14 6568 6560 6 1011 254 29 29 0 chrX 55927956 55927991 -110722305 + (TTA)n Simple_repeat Simple_repeat 1 36 0 6 1011 1068 54 0 26 chrX 55927991 55928130 -110722166 - L1Md_F2 LINE L1 -23 6559 6422 6 1011 426 324 35 74 chrX 55928130 55928178 -110722118 + MLT1C LTR MaLR 413 465 -2 6 1011 1135 309 41 69 chrX 55928294 55928829 -110721467 + MLT2B1 LTR ERVL 1 520 0 6 1011 340 296 122 17 chrX 55929464 55929636 -110720660 - MER58B DNA MER1_type -8 333 144 6 1011 348 220 77 13 chrX 55931964 55932091 -110718205 + B1F SINE Alu 1 140 -9 6 1011 1468 46 20 5 chrX 55932924 55933120 -110717176 - L1Md_F2 LINE L1 0 6582 6384 6 1011 3265 70 0 39 chrX 55933122 55933584 -110716712 - L1Md_F2 LINE L1 0 6582 6139 6 1011 6709 63 17 15 chrX 55933915 55934494 -110715802 + RLTR13B1 LTR ERVK 1 594 -299 6 1011 4207 50 14 0 chrX 55934494 55935013 -110715283 - L1Md_F2 LINE L1 0 6582 6057 6 1011 6709 63 17 15 chrX 55935013 55935324 -110714972 + RLTR13B1 LTR ERVK 595 893 0 6 1011 4371 124 21 1 chrX 55936814 55937482 -110712814 - Lx2 LINE L1 -6 6991 6311 6 1011 24 0 0 0 chrX 55938582 55938606 -110711690 + AT_rich Low_complexity Low_complexity 1 24 0 6 1011 280 183 73 65 chrX 55939562 55939685 -110710611 + Lx4B LINE L1 6927 7050 -8 6 1011 257 358 61 51 chrX 55939721 55939918 -110710378 + MIRb SINE MIR 4 202 -66 6 1011 336 48 0 0 chrX 55939963 55940005 -110710291 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1011 197 303 30 0 chrX 55940067 55940133 -110710163 - MIR SINE MIR -111 151 84 6 1011 766 258 14 36 chrX 55940924 55941145 -110709151 + B3 SINE B2 1 216 0 6 1011 225 288 84 19 chrX 55941853 55942018 -110708278 + MIR SINE MIR 69 251 -17 6 1011 201 154 0 0 chrX 55942733 55942772 -110707524 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1011 2639 41 20 6 chrX 55942828 55943169 -110707127 - L1Md_F3 LINE L1 0 6584 6239 6 1011 5085 29 0 0 chrX 55943169 55943973 -110706323 + L1Md_T LINE L1 5411 6214 -368 6 1011 3114 108 12 0 chrX 55944396 55944895 -110705401 - L1_Mur2 LINE L1 -1860 4017 3513 6 1011 3341 120 13 101 chrX 55945394 55946155 -110704141 - L1_Mur2 LINE L1 -2351 3526 2833 6 1011 456 256 44 22 chrX 55946154 55946334 -110703962 - L1_Mur3 LINE L1 -465 5415 5232 6 1011 6288 71 1 10 chrX 55946335 55947161 -110703135 - L1Md_F2 LINE L1 -4 6578 5760 6 1011 18439 81 2 1 chrX 55947161 55950089 -110700207 - L1Md_F2 LINE L1 -2002 3881 951 6 1011 1007 190 14 13 chrX 55950594 55950800 -110699496 - B2_Mm2 SINE B2 -2 214 1 6 1011 225 0 0 0 chrX 55951667 55951692 -110698604 + (TC)n Simple_repeat Simple_repeat 2 26 0 6 1011 788 48 0 0 chrX 55951692 55951795 -110698501 - B1_Mm SINE Alu 0 147 45 6 1011 3694 142 9 25 chrX 55951922 55952558 -110697738 + Lx4B LINE L1 6433 7058 0 6 1011 994 267 22 33 chrX 55953184 55953455 -110696841 - RMER15 LTR ERVL -2 573 306 6 1011 339 265 63 44 chrX 55953669 55953827 -110696469 - MIR SINE MIR -58 210 45 6 1011 468 0 0 0 chrX 55956490 55956542 -110693754 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1011 358 348 131 38 chrX 55956639 55957189 -110693107 + L2a LINE L2 2822 3426 0 6 1011 684 199 15 0 chrX 55958145 55958276 -110692020 - B1_Mus2 SINE Alu -5 142 10 6 1011 7835 37 2 1 chrX 55958328 55959910 -110690386 - L1Md_F2 LINE L1 -12 6570 4987 6 1011 225 221 63 25 chrX 55959995 55960074 -110690222 + L1MA5 LINE L1 6200 6281 -19 6 1011 487 304 134 17 chrX 55960327 55960625 -110689671 + L1MEc LINE L1 903 1235 -5165 6 1011 291 54 0 0 chrX 55960681 55960718 -110689578 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 6 1011 3590 253 114 34 chrX 55960748 55962367 -110687929 - Lx9 LINE L1 -2 7642 5748 6 1011 253 382 13 0 chrX 55963654 55963730 -110686566 + ID4 SINE ID 5 81 -2 6 1011 42 20 0 0 chrX 55964085 55964134 -110686162 + AT_rich Low_complexity Low_complexity 1 49 0 6 1011 644 356 113 73 chrX 55964451 55965357 -110684939 + MTE-int LTR MaLR 693 1547 -33 6 1011 512 264 44 4 chrX 55965401 55965645 -110684651 - L1M4 LINE L1 -720 5436 5180 6 1011 25 0 0 0 chrX 55966180 55966205 -110684091 + AT_rich Low_complexity Low_complexity 1 25 0 6 1011 205 200 0 0 chrX 55966953 55966993 -110683303 + (TA)n Simple_repeat Simple_repeat 1 40 0 6 126 2163 234 40 16 chrX 55967010 55967761 -110682535 + Lx9 LINE L1 5258 6052 -1592 6 1012 4502 118 26 25 chrX 55967934 55968689 -110681607 - RMER6A LTR ERVK 0 756 1 6 1012 800 198 19 0 chrX 55968689 55968851 -110681445 + Lx9 LINE L1 6450 6614 -1030 6 1012 602 236 354 13 chrX 55968854 55969169 -110681127 + Lx9 LINE L1 7071 7492 -152 6 1012 27 0 0 0 chrX 55969176 55969203 -110681093 + AT_rich Low_complexity Low_complexity 1 27 0 6 1012 535 159 43 62 chrX 55969211 55969372 -110680924 + Lx9 LINE L1 7484 7641 -3 6 1012 666 12 0 0 chrX 55972780 55972864 -110677432 + L1Md_T LINE L1 6499 6582 0 6 1012 483 18 0 0 chrX 55973494 55973550 -110676746 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 1012 375 274 178 8 chrX 55973575 55973693 -110676603 - RSINE1 SINE B4 -23 142 5 6 1012 1060 186 0 117 chrX 55974612 55974928 -110675368 + Lx7 LINE L1 7417 7695 -1 6 1012 213 132 0 0 chrX 55974994 55975032 -110675264 + (CATA)n Simple_repeat Simple_repeat 2 39 0 6 1012 1056 72 0 0 chrX 55975112 55975251 -110675045 - L1_Mus1 LINE L1 0 6567 6429 6 1012 1819 165 66 36 chrX 55976015 55976380 -110673916 - ORR1C1 LTR MaLR -1 377 2 7 1012 714 302 28 20 chrX 55976464 55976714 -110673582 + Lx8 LINE L1 6870 7121 -352 7 1012 7331 59 3 10 chrX 55976712 55977730 -110672566 + L1_Mus1 LINE L1 5555 6565 -2 7 1012 253 242 74 0 chrX 55977744 55977839 -110672457 + L1MD1 LINE L1 6028 6129 -113 7 1012 8463 98 21 17 chrX 55977983 55979389 -110670907 - MusHAL1 LINE L1 -632 2080 669 7 1012 209 204 0 0 chrX 55979828 55979872 -110670424 + (CAT)n Simple_repeat Simple_repeat 3 46 0 7 1012 5197 163 16 37 chrX 55979872 55980822 -110669474 - Lx4A LINE L1 -11 7047 6118 7 1012 333 0 0 0 chrX 55981428 55981465 -110668831 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1012 1204 264 40 48 chrX 55982641 55983026 -110667270 - MTE2a LTR MaLR -14 405 18 7 1012 462 286 141 74 chrX 55983031 55983558 -110666738 + L1M5 LINE L1 4407 4968 -1178 7 1012 446 262 195 0 chrX 55983576 55983725 -110666571 + B3A SINE B2 5 182 -16 7 1012 22 0 0 0 chrX 55984005 55984027 -110666269 + AT_rich Low_complexity Low_complexity 1 22 0 7 1012 339 306 111 12 chrX 55984153 55984325 -110665971 - LTR55 LTR ERV -18 530 342 7 1012 538 269 34 22 chrX 55984426 55984605 -110665691 + Lx8 LINE L1 7043 7223 -250 7 1012 872 153 44 6 chrX 55984654 55984812 -110665484 + URR1B DNA MER1_type 60 223 -2 7 1012 225 306 28 0 chrX 55984839 55984911 -110665385 + Lx8 LINE L1 7153 7226 -247 7 1012 513 268 56 7 chrX 55984954 55985097 -110665199 + RMER15 LTR ERVL 425 574 -1 7 1012 347 389 0 12 chrX 55985225 55985389 -110664907 + RMER15-int LTR ERVL 155 316 -4683 7 1012 497 167 115 0 chrX 55985407 55985503 -110664793 + RMER21B LTR ERV1 42 148 -694 7 1012 493 254 141 60 chrX 55985596 55985780 -110664516 + RMER21B LTR ERV1 365 563 -279 7 1012 1455 166 17 51 chrX 55986034 55986384 -110663912 - Lx7 LINE L1 0 7696 7359 7 1012 1389 227 45 3 chrX 55986455 55986808 -110663488 - Lx7 LINE L1 -352 7344 6977 7 1012 1723 262 208 20 chrX 55986794 55987820 -110662476 - Lx5 LINE L1 0 7460 5832 7 1012 186 43 0 0 chrX 55987820 55987843 -110662453 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1012 1723 258 218 24 chrX 55987843 55987888 -110662408 - Lx5 LINE L1 -1219 5831 5787 7 1012 186 43 0 0 chrX 55987931 55987954 -110662342 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 7 1012 180 336 62 56 chrX 55988157 55988318 -110661978 - MIRb SINE MIR -16 252 91 7 1012 758 232 22 22 chrX 55988325 55988488 -110661808 + B3 SINE B2 1 165 -51 7 1012 369 0 0 0 chrX 55988488 55988529 -110661767 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1012 758 232 22 22 chrX 55988529 55988546 -110661750 + B3 SINE B2 166 181 -35 7 1012 22 0 0 0 chrX 55988839 55988861 -110661435 + AT_rich Low_complexity Low_complexity 1 22 0 7 1012 386 333 28 14 chrX 55988974 55989117 -110661179 + MER45A DNA Tip100 13 157 -21 7 1012 418 259 28 0 chrX 55989415 55989523 -110660773 + MIRc SINE MIR 101 211 -57 7 1012 564 15 0 0 chrX 55991131 55991196 -110659100 + (GA)n Simple_repeat Simple_repeat 1 65 0 7 1012 296 373 46 22 chrX 55991223 55991492 -110658804 + MIR SINE MIR 1 262 0 7 1012 208 242 26 132 chrX 55992612 55992688 -110657608 + MIR SINE MIR 83 150 -58 7 1012 254 354 101 37 chrX 55992945 55993133 -110657163 + MIR3 SINE MIR 2 201 -7 7 1012 1096 279 106 35 chrX 55994604 55994883 -110655413 - RMER5 LTR ERV1 -8 526 226 7 1012 312 27 0 0 chrX 55994883 55994920 -110655376 + (TC)n Simple_repeat Simple_repeat 2 38 0 7 1012 180 0 0 0 chrX 55994920 55994939 -110655357 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 1012 306 0 0 0 chrX 55994939 55994972 -110655324 + (GA)n Simple_repeat Simple_repeat 1 34 0 7 1012 1096 279 106 35 chrX 55994972 55995154 -110655142 - RMER5 LTR ERV1 -309 225 32 7 1012 7205 150 22 8 chrX 55995624 55996824 -110653472 - Lx4A LINE L1 -1 7057 5841 7 1012 6306 114 39 8 chrX 55996934 55998355 -110651941 - L1Md_F LINE L1 -3675 2208 757 7 1012 2299 91 113 11 chrX 55998355 55998709 -110651587 + RLTR10 LTR ERVK 1 390 0 7 1012 3648 149 124 18 chrX 55998709 55999024 -110651272 - L1Md_F LINE L1 -5860 756 390 7 1012 417 156 0 0 chrX 55999462 55999539 -110650757 + (TG)n Simple_repeat Simple_repeat 1 77 0 7 1012 190 345 68 11 chrX 56000503 56000591 -110649705 - L2a LINE L2 -340 3086 2994 1 1012 869 258 22 26 chrX 56000691 56000918 -110649378 + MTD LTR MaLR 1 226 -193 2 1012 2381 260 36 27 chrX 56000920 56001738 -110648558 + RMER1B Other Other 46 1045 -21 3 1012 601 258 149 17 chrX 56001738 56001952 -110648344 + MTD LTR MaLR 194 409 -12 2 1012 272 367 64 37 chrX 56001957 56002331 -110647965 - L2a LINE L2 -557 2862 2479 1 1012 5514 138 3 2 chrX 56002407 56003270 -110647026 - Lx2 LINE L1 -1 6996 6133 4 1012 409 284 31 47 chrX 56003324 56003453 -110646843 - B1F2 SINE Alu -7 142 16 5 1012 310 366 43 34 chrX 56003466 56003701 -110646595 - L2a LINE L2 -945 2474 2238 1 1012 364 259 0 12 chrX 56005694 56005776 -110644520 + MLT1A0 LTR MaLR 41 121 -244 6 1012 280 232 29 0 chrX 56005879 56005948 -110644348 + MLT1A0 LTR MaLR 304 374 0 6 1012 892 208 86 5 chrX 56005979 56006177 -110644119 - B3 SINE B2 -1 215 2 7 1012 424 303 100 70 chrX 56007325 56007584 -110642712 - L1ME4a LINE L1 -239 5885 5619 8 1012 318 269 24 87 chrX 56007715 56007841 -110642455 - HAL1-3A_ME LINE L1 -765 2093 1976 9 1012 225 0 0 0 chrX 56007844 56007869 -110642427 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 1 1012 629 286 125 12 chrX 56007912 56008160 -110642136 - B4A SINE B4 -16 276 1 1 1012 339 304 18 58 chrX 56008441 56008576 -110641720 - L1MA4 LINE L1 -370 5930 5794 1 1012 300 27 0 0 chrX 56008576 56008613 -110641683 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1012 339 304 18 58 chrX 56008613 56008648 -110641648 - L1MA4 LINE L1 -507 5793 5767 1 1012 24 0 0 0 chrX 56008653 56008677 -110641619 + AT_rich Low_complexity Low_complexity 1 24 0 1 1012 1441 235 25 11 chrX 56010298 56010655 -110639641 + Lx6 LINE L1 7099 7460 0 1 1012 2628 49 4 191 chrX 56010725 56011202 -110639094 + RLTR10 LTR ERVK 1 388 -2 1 1012 183 305 65 79 chrX 56011393 56011532 -110638764 - MIR SINE MIR -70 192 56 1 1012 26 0 0 0 chrX 56013458 56013484 -110636812 + AT_rich Low_complexity Low_complexity 1 26 0 1 1012 597 322 29 41 chrX 56013562 56013808 -110636488 - B4 SINE B4 -8 284 42 1 1012 1896 104 15 0 chrX 56013870 56014138 -110636158 - L1_Mus1 LINE L1 0 6567 6296 2 1012 339 253 80 31 chrX 56014315 56014478 -110635818 - L1MD3 LINE L1 -204 7791 7621 2 1012 267 328 40 0 chrX 56014756 56014933 -110635363 - L1MD3 LINE L1 -913 7082 6899 2 1012 819 297 46 32 chrX 56015000 56015282 -110635014 + B4A SINE B4 3 288 -4 2 1012 209 265 0 0 chrX 56015291 56015340 -110634956 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1012 186 350 91 20 chrX 56015340 56015439 -110634857 + MIRm SINE MIR 135 240 -36 2 1012 297 0 0 0 chrX 56016682 56016715 -110633581 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1012 265 311 140 9 chrX 56017928 56018035 -110632261 + MIR SINE MIR 31 151 -57 2 1012 203 302 0 0 chrX 56018122 56018185 -110632111 + (ATG)n Simple_repeat Simple_repeat 3 65 0 2 1012 382 382 17 11 chrX 56018922 56019102 -110631194 + MIRc SINE MIR 14 194 -74 2 1012 428 246 49 8 chrX 56020665 56020788 -110629508 - L1MC1 LINE L1 -92 6241 6114 2 1012 36 54 0 13 chrX 56020845 56020896 -110629400 + AT_rich Low_complexity Low_complexity 1 51 0 3 1012 4642 62 7 3 chrX 56020896 56021493 -110628803 - L1Md_F2 LINE L1 -5 6577 5979 3 1012 36 54 0 13 chrX 56021493 56021516 -110628780 + AT_rich Low_complexity Low_complexity 1 23 0 3 1012 579 318 138 46 chrX 56021753 56022102 -110628194 + MLT1B LTR MaLR 6 386 -4 3 1012 1071 284 23 49 chrX 56022771 56023116 -110627180 + MTE2a LTR MaLR 34 369 -10 3 1012 647 245 6 68 chrX 56023752 56023914 -110626382 - ORR1E LTR MaLR -2 357 206 3 1012 272 179 30 0 chrX 56023937 56024004 -110626292 + CT-rich Low_complexity Low_complexity 3 71 0 3 1012 777 203 0 0 chrX 56024025 56024158 -110626138 - B1_Mur1 SINE Alu -5 144 12 3 1012 440 313 42 147 chrX 56024158 56024208 -110626088 - ID_B1 SINE B4 -62 209 60 3 1012 588 183 239 0 chrX 56024599 56024741 -110625555 - B3 SINE B2 -2 214 39 3 1012 2990 55 8 38 chrX 56024743 56025143 -110625153 - RLTR10 LTR ERVK -2 388 1 4 1012 16287 25 4 3 chrX 56025143 56027126 -110623170 - RLTR10-int LTR ERVK -1 1986 3 4 1012 2971 58 13 5 chrX 56027134 56027517 -110622779 - RLTR10 LTR ERVK -4 386 1 4 1012 3455 227 68 15 chrX 56027657 56028506 -110621790 - Lx5 LINE L1 -75 6975 6082 4 1012 288 297 15 60 chrX 56028521 56028662 -110621634 - LTR86A1 LTR ERVL -282 226 95 4 1012 306 84 27 27 chrX 56028892 56028965 -110621331 + (CAAAA)n Simple_repeat Simple_repeat 5 77 0 4 1012 943 288 10 24 chrX 56028965 56029381 -110620915 + L1M2 LINE L1 4865 5274 -869 4 1012 501 227 0 0 chrX 56029381 56029478 -110620818 - B3 SINE B2 -101 115 19 4 1012 401 127 56 0 chrX 56029499 56029570 -110620726 - Lx9 LINE L1 -640 7004 6930 4 1012 352 336 19 0 chrX 56029582 56029686 -110620610 - B4A SINE B4 -185 107 2 4 1012 212 29 86 0 chrX 56030129 56030164 -110620132 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 4 1012 459 296 98 37 chrX 56030452 56030666 -110619630 + MLT1I LTR MaLR 3 229 -182 4 1012 21 36 0 0 chrX 56030761 56030789 -110619507 + AT_rich Low_complexity Low_complexity 1 28 0 5 1012 1191 274 135 29 chrX 56030995 56031956 -110618340 + L1MA5A LINE L1 4764 5837 -460 5 1012 3504 80 4 26 chrX 56032128 56032626 -110617670 + L1_Mus2 LINE L1 6080 6566 0 5 1012 517 210 0 39 chrX 56032675 56032696 -110617600 + ID SINE ID 64 80 -144 5 1012 328 351 9 9 chrX 56032696 56032808 -110617488 + PB1D10 SINE Alu 1 112 -5 5 1012 240 191 44 0 chrX 56033344 56033412 -110616884 + (CATA)n Simple_repeat Simple_repeat 2 72 0 5 1012 190 312 128 0 chrX 56033606 56033731 -110616565 - L2a LINE L2 -1 3425 3285 5 1012 908 310 117 25 chrX 56033970 56034294 -110616002 - ORR1E LTR MaLR -2 357 4 5 1012 237 98 0 0 chrX 56034303 56034344 -110615952 + (A)n Simple_repeat Simple_repeat 1 41 0 5 1012 252 323 15 0 chrX 56034347 56034412 -110615884 + ID_B1 SINE B4 54 119 -105 5 1012 1102 90 7 0 chrX 56035665 56035810 -110614486 - B1_Mus1 SINE Alu 0 148 3 6 1012 291 324 0 0 chrX 56035821 56035895 -110614401 + B1_Mur1 SINE Alu 62 135 -14 6 1012 29 0 0 0 chrX 56035906 56035935 -110614361 + AT_rich Low_complexity Low_complexity 1 29 0 6 1012 781 187 21 14 chrX 56036521 56036662 -110613634 + B1_Mus2 SINE Alu 1 142 -5 6 1012 239 164 16 32 chrX 56036667 56036730 -110613566 + (CAAA)n Simple_repeat Simple_repeat 3 64 0 6 1012 258 275 26 44 chrX 56036866 56036980 -110613316 - L2a LINE L2 -93 3333 3222 6 1012 229 246 56 28 chrX 56037084 56037155 -110613141 + ID SINE ID 8 80 -144 6 1012 201 132 0 0 chrX 56037172 56037210 -110613086 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 1012 359 261 75 23 chrX 56037342 56037475 -110612821 + B1F SINE Alu 5 144 -5 6 1012 222 116 0 0 chrX 56037929 56037972 -110612324 + (TA)n Simple_repeat Simple_repeat 2 44 0 6 1012 238 263 66 132 chrX 56038404 56038540 -110611756 - MER45R DNA Tip100 -1401 180 54 7 1012 302 333 10 0 chrX 56038585 56038681 -110611615 + HAL1-3A_ME LINE L1 1978 2074 -784 7 1012 254 214 92 0 chrX 56038969 56039067 -110611229 + Lx5 LINE L1 6943 7049 -1 7 1012 1201 201 50 35 chrX 56039629 56039969 -110610327 - Lx5 LINE L1 -768 6282 5938 7 1012 2667 172 82 47 chrX 56039969 56040856 -110609440 - RLTR13D1 LTR ERVK 0 893 1 7 1012 248 105 0 0 chrX 56040856 56040894 -110609402 - Lx5 LINE L1 -1107 5943 5906 7 1012 1535 134 42 11 chrX 56040899 56041185 -110609111 + L1_Mur2 LINE L1 3995 4289 -1588 7 1012 236 452 78 19 chrX 56041200 56041468 -110608828 - MER45C DNA Tip100 -385 568 285 7 1012 38227 27 3 6 chrX 56041593 56048195 -110602101 - L1Md_T LINE L1 0 6582 1 7 1012 222 37 0 0 chrX 56048308 56048335 -110601961 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1012 36429 42 0 3 chrX 56048461 56054771 -110595525 - L1Md_T LINE L1 0 6585 196 7 1012 220 339 0 0 chrX 56055224 56055289 -110595007 + C-rich Low_complexity Low_complexity 6 70 0 8 1012 931 152 6 6 chrX 56055753 56055932 -110594364 + CT-rich Low_complexity Low_complexity 1 179 0 8 1012 743 209 22 0 chrX 56055937 56056076 -110594220 - B1_Mur1 SINE Alu -1 148 7 8 1012 462 288 13 46 chrX 56055942 56056095 -110594201 - ID_B1 SINE B4 -6 218 71 8 1012 341 305 245 16 chrX 56056264 56056574 -110593722 - L1M5 LINE L1 -466 5713 5333 8 1012 340 298 114 64 chrX 56056898 56057196 -110593100 - L1MEg LINE L1 -4383 1701 1389 8 1012 4366 163 18 67 chrX 56057207 56058713 -110591583 + L1VL4 LINE L1 86 1512 -2047 8 1012 11463 106 16 8 chrX 56058711 56061251 -110589045 + L1_Mus3 LINE L1 4077 6632 -6 8 1012 252 0 0 0 chrX 56061499 56061527 -110588769 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 8 1012 374 282 97 77 chrX 56061527 56061827 -110588469 - L1M4 LINE L1 -5225 1317 1012 8 1012 4088 71 5 7 chrX 56061997 56062548 -110587748 + L1Md_F2 LINE L1 6030 6579 -3 9 1012 396 0 0 0 chrX 56063285 56063329 -110586967 + (T)n Simple_repeat Simple_repeat 1 44 0 9 1012 219 88 0 0 chrX 56063403 56063437 -110586859 + (A)n Simple_repeat Simple_repeat 1 34 0 9 1012 181 304 0 0 chrX 56063923 56063969 -110586327 - L2c LINE L2 -84 3303 3258 9 1012 24 32 0 0 chrX 56064084 56064115 -110586181 + AT_rich Low_complexity Low_complexity 1 31 0 9 1012 728 217 84 51 chrX 56065493 56065707 -110584589 + URR1A DNA MER1_type 5 225 -1 9 1012 3162 62 2 0 chrX 56066233 56066639 -110583657 + L1Md_F3 LINE L1 6177 6583 -1 9 1012 2828 129 18 47 chrX 56067014 56067528 -110582768 + Lx3B LINE L1 6471 6969 -4 9 1012 470 17 0 17 chrX 56067663 56067723 -110582573 + (TG)n Simple_repeat Simple_repeat 2 60 0 9 1012 881 285 61 6 chrX 56068464 56068896 -110581400 - L1MB7 LINE L1 -1 6183 5723 9 1012 401 276 163 44 chrX 56068888 56069132 -110581164 - L1MB7 LINE L1 -966 5180 4909 9 1012 315 0 0 0 chrX 56069132 56069167 -110581129 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1012 401 276 163 44 chrX 56069167 56069182 -110581114 - L1MB7 LINE L1 -1238 4908 4896 9 1012 575 293 18 63 chrX 56069182 56069404 -110580892 + B3 SINE B2 5 216 0 1 1012 401 276 163 44 chrX 56069404 56069646 -110580650 - L1MB7 LINE L1 -1251 4895 4619 9 1012 1356 282 19 16 chrX 56069693 56070064 -110580232 + MTEa LTR MaLR 3 374 -5 1 1012 236 300 22 0 chrX 56070070 56070160 -110580136 - L1MB7 LINE L1 -1584 4562 4471 9 1012 2153 293 68 76 chrX 56071199 56072191 -110578105 - ORR1D2-int LTR MaLR -596 984 1 1 1012 621 309 52 70 chrX 56072197 56072566 -110577730 - ORR1D2 LTR MaLR -3 367 6 1 1012 504 30 0 0 chrX 56072920 56072986 -110577310 - L1Md_T LINE L1 -1 6581 6516 1 1012 202 222 37 0 chrX 56073527 56073581 -110576715 - MIRc SINE MIR -38 230 175 1 1012 247 291 27 80 chrX 56073942 56074054 -110576242 + LTR33 LTR ERVL 39 144 -371 1 1012 199 292 91 15 chrX 56074839 56074905 -110575391 - MIRb SINE MIR -22 246 176 1 1012 279 213 142 44 chrX 56076171 56076284 -110574012 + Lx8 LINE L1 6161 6284 -1189 1 1012 23 0 0 0 chrX 56076284 56076307 -110573989 + AT_rich Low_complexity Low_complexity 1 23 0 1 1012 4666 226 92 87 chrX 56076552 56076733 -110573563 - RMER12 LTR ERVK -413 909 839 1 1012 390 21 0 0 chrX 56076733 56076780 -110573516 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1012 4666 153 12 70 chrX 56076780 56077651 -110572645 - RMER12 LTR ERVK -484 838 8 1 1012 290 286 20 30 chrX 56077666 56077767 -110572529 + Lx8 LINE L1 6299 6398 -1075 1 1012 1848 324 54 29 chrX 56077858 56078760 -110571536 + Lx8 LINE L1 6432 7356 -117 1 1012 22 35 0 0 chrX 56078843 56078872 -110571424 + AT_rich Low_complexity Low_complexity 1 29 0 1 1012 598 274 29 7 chrX 56079103 56079239 -110571057 + ID_B1 SINE B4 80 218 -6 1 1012 5302 121 40 1 chrX 56079498 56080316 -110569980 - Lx2 LINE L1 0 6997 6148 1 1012 702 167 0 0 chrX 56080951 56081083 -110569213 + (TA)n Simple_repeat Simple_repeat 2 133 0 1 1012 642 38 0 0 chrX 56081280 56081360 -110568936 - L1Md_F2 LINE L1 -605 5977 5898 1 1012 4498 52 2 81 chrX 56081360 56082004 -110568292 + L1Md_F2 LINE L1 5989 6581 -1 1 1012 180 0 0 0 chrX 56082439 56082459 -110567837 + (TC)n Simple_repeat Simple_repeat 2 21 0 1 1012 225 0 0 0 chrX 56082459 56082483 -110567813 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1012 211 370 65 0 chrX 56083468 56083576 -110566720 - MIR SINE MIR -24 238 124 1 1012 8721 134 7 9 chrX 56083740 56085128 -110565168 - Lx2 LINE L1 0 6997 5613 1 1012 1327 272 39 46 chrX 56087989 56088428 -110561868 - Lx8 LINE L1 -849 6624 6189 1 1012 1042 272 73 33 chrX 56088625 56089024 -110561272 - Lx8 LINE L1 -108 5772 5358 1 1012 243 242 0 29 chrX 56089042 56089110 -110561186 - Lx7 LINE L1 -21 7675 7610 1 1012 450 53 0 0 chrX 56089139 56089196 -110561100 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 1012 405 261 197 0 chrX 56089196 56089338 -110560958 - Lx7 LINE L1 -384 7312 7143 1 1012 1236 199 30 116 chrX 56089330 56089769 -110560527 + L1_Mur3 LINE L1 4293 4693 -1187 1 1012 7985 43 5 1 chrX 56089776 56090813 -110559483 - L1Md_F2 LINE L1 -3 6579 5536 1 1012 631 175 8 8 chrX 56090814 56090935 -110559361 + L1_Mur3 LINE L1 4689 4809 -1071 1 1012 943 278 35 26 chrX 56090934 56091277 -110559019 - Lx8 LINE L1 -1121 4759 4414 1 1012 406 241 0 0 chrX 56091278 56091357 -110558939 - RLTR31_Mm LTR ERVK 0 561 483 1 1012 381 75 0 0 chrX 56091364 56091417 -110558879 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1012 344 83 0 0 chrX 56091420 56091480 -110558816 - L1_Mus3 LINE L1 -2 6636 6577 1 1012 1058 145 0 0 chrX 56091481 56091653 -110558643 - RLTR17 LTR ERVK -112 580 409 1 1012 1288 134 59 21 chrX 56091651 56091887 -110558409 - RLTR17 LTR ERVK -445 247 3 1 1012 619 284 213 34 chrX 56091990 56092490 -110557806 + Lx7 LINE L1 5097 5720 -1976 1 1012 22 0 0 0 chrX 56092639 56092661 -110557635 + AT_rich Low_complexity Low_complexity 1 22 0 1 1012 21 36 0 0 chrX 56093066 56093094 -110557202 + AT_rich Low_complexity Low_complexity 1 28 0 1 1012 216 327 64 0 chrX 56093704 56093814 -110556482 - MIRb SINE MIR -7 261 145 1 1012 359 266 0 18 chrX 56093945 56094056 -110556240 + L1MA9 LINE L1 5819 5927 -385 1 1012 264 338 150 39 chrX 56094133 56094466 -110555830 - L2 LINE L2 -339 3080 2711 1 1012 215 316 0 26 chrX 56095318 56095396 -110554900 + CT-rich Low_complexity Low_complexity 4 79 0 1 1012 417 257 0 16 chrX 56095499 56095681 -110554615 + (TA)n Simple_repeat Simple_repeat 2 180 0 1 1012 213 246 16 16 chrX 56095684 56095746 -110554550 + (CATATA)n Simple_repeat Simple_repeat 5 66 0 1 1012 2189 290 66 30 chrX 56096872 56097601 -110552695 - Lx8 LINE L1 -4 7469 6715 1 1012 2884 21 2 179 chrX 56097922 56098396 -110551900 + RLTR10 LTR ERVK 1 390 0 1 1012 2842 33 3 0 chrX 56098406 56098740 -110551556 + RLTR10-int LTR ERVK 41 375 -1612 1 126 8314 14 3 0 chrX 56098738 56099671 -110550625 + RLTR10-int LTR ERVK 1049 1984 -3 1 1013 2884 21 2 179 chrX 56099673 56100147 -110550149 + RLTR10 LTR ERVK 1 390 0 1 1013 1730 128 94 3 chrX 56101925 56102224 -110548072 + IAPLTR4 LTR ERVK 1 326 -19 1 1013 31439 85 10 16 chrX 56102664 56107546 -110542750 + L1Md_F2 LINE L1 366 5221 -662 1 1013 394 83 14 14 chrX 56107546 56107619 -110542677 + (TA)n Simple_repeat Simple_repeat 1 73 0 1 1013 31439 79 6 5 chrX 56107619 56107987 -110542309 + L1Md_F2 LINE L1 5222 5590 -293 1 1013 7867 59 0 0 chrX 56107989 56108965 -110541331 + L1Md_F2 LINE L1 5593 6568 -14 1 1013 438 75 0 0 chrX 56109084 56109151 -110541145 + (T)n Simple_repeat Simple_repeat 1 67 0 1 1013 971 78 0 0 chrX 56109639 56109767 -110540529 - B1_Mus2 SINE Alu 0 147 20 1 1013 30 27 0 0 chrX 56109899 56109936 -110540360 + AT_rich Low_complexity Low_complexity 1 37 0 1 1013 3037 52 31 0 chrX 56109937 56110321 -110539975 - MTA_Mm LTR MaLR 0 396 1 1 1013 21 57 0 0 chrX 56111420 56111455 -110538841 + AT_rich Low_complexity Low_complexity 1 35 0 1 1013 274 202 48 4 chrX 56111621 56111693 -110538603 + L1MA5 LINE L1 5864 5936 -364 1 1013 645 131 0 0 chrX 56112172 56112279 -110538017 + (TCCC)n Simple_repeat Simple_repeat 4 110 0 1 1013 2558 229 143 36 chrX 56112569 56113316 -110536980 + RMER13A LTR ERVK 18 844 -16 1 1013 284 209 36 79 chrX 56113355 56113495 -110536801 + L1MB7 LINE L1 5297 5430 -749 1 1013 381 277 0 0 chrX 56113506 56113589 -110536707 + B4A SINE B4 3 85 -207 1 1013 752 122 0 8 chrX 56113591 56113715 -110536581 + (GGAAA)n Simple_repeat Simple_repeat 3 125 0 1 1013 431 255 48 62 chrX 56113746 56113868 -110536428 + B4A SINE B4 149 270 -22 1 1013 264 30 0 0 chrX 56113868 56113901 -110536395 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1013 431 255 48 62 chrX 56113901 56113924 -110536372 + B4A SINE B4 271 291 -1 1 1013 292 242 50 0 chrX 56113930 56114046 -110536250 + L1M3 LINE L1 5412 5537 -634 1 1013 22 70 0 0 chrX 56114307 56114350 -110535946 + AT_rich Low_complexity Low_complexity 1 43 0 1 1013 923 274 35 0 chrX 56114356 56114557 -110535739 + B3 SINE B2 1 208 -8 1 1013 319 336 70 19 chrX 56114564 56114799 -110535497 + L1MB7 LINE L1 5724 5962 -217 1 1013 33766 36 0 0 chrX 56114799 56120441 -110529855 + L1Md_T LINE L1 2 5589 -297 1 1013 8997 7 0 0 chrX 56120441 56121437 -110528859 + L1Md_T LINE L1 5590 6585 0 1 1013 281 298 79 0 chrX 56121455 56121633 -110528663 + L1MB7 LINE L1 5968 6159 -20 1 1013 711 248 190 65 chrX 56122198 56122535 -110527761 + MTE2b LTR MaLR 1 379 0 1 1013 279 0 0 0 chrX 56122597 56122628 -110527668 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1013 497 195 129 55 chrX 56122658 56122697 -110527599 - MERVL_2A-int LTR ERVL -3485 2276 2239 1 1013 1241 210 106 50 chrX 56122697 56123094 -110527202 - MTD LTR MaLR 0 419 1 1 1013 497 195 129 55 chrX 56123094 56123217 -110527079 - MERVL_2A-int LTR ERVL -3523 2238 2102 1 1013 1714 295 37 20 chrX 56123210 56123856 -110526440 - MERVL_2A-int LTR ERVL -4695 1066 410 1 1013 534 270 66 25 chrX 56123863 56124137 -110526159 - MERVL_2A-int LTR ERVL -5475 286 2 1 1013 203 262 0 0 chrX 56124174 56124235 -110526061 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 1013 1716 230 50 30 chrX 56124755 56125159 -110525137 - MT2A LTR ERVL -121 412 1 1 1013 329 318 18 89 chrX 56125513 56125614 -110524682 + ID_B1 SINE B4 65 160 -64 1 1013 2582 65 3 0 chrX 56125614 56125951 -110524345 + L1_Mus1 LINE L1 6229 6566 -1 1 1013 329 318 18 89 chrX 56125951 56126018 -110524278 + ID_B1 SINE B4 161 221 -3 1 1013 280 286 57 0 chrX 56126032 56126102 -110524194 + ID4 SINE ID 8 81 -2 1 1013 237 108 0 0 chrX 56126102 56126139 -110524157 + (GGAA)n Simple_repeat Simple_repeat 1 37 0 1 1013 301 321 7 71 chrX 56126213 56126354 -110523942 - L1MD LINE L1 -2153 3993 3862 1 1013 558 340 47 16 chrX 56126369 56126862 -110523434 - L1MD LINE L1 -2339 3807 3300 1 1013 358 260 88 16 chrX 56126875 56127000 -110523296 - ID_B1 SINE B4 -1 223 90 1 1013 365 70 18 0 chrX 56127142 56127199 -110523097 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1013 547 276 67 0 chrX 56127225 56127359 -110522937 - B3A SINE B2 -55 143 1 1 1013 476 260 130 17 chrX 56127361 56127592 -110522704 - L1M4 LINE L1 -3002 3144 2888 1 1013 1182 55 7 0 chrX 56127681 56127827 -110522469 - B1_Mm SINE Alu 0 147 1 1 1013 237 33 0 0 chrX 56127966 56127996 -110522300 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 1 1013 5020 69 1 3 chrX 56128203 56128858 -110521438 - L1_Mus2 LINE L1 -1 6565 5912 1 1013 467 321 44 0 chrX 56129084 56129221 -110521075 - ID_B1 SINE B4 -68 156 14 1 1013 3265 133 35 6 chrX 56129644 56130158 -110520138 + Lx3B LINE L1 6439 6967 -6 1 1013 364 382 58 19 chrX 56130538 56130797 -110519499 - L1M5 LINE L1 -442 5682 5414 1 1013 30 27 0 0 chrX 56131006 56131043 -110519253 + AT_rich Low_complexity Low_complexity 1 37 0 1 1013 22 0 0 0 chrX 56131213 56131235 -110519061 + AT_rich Low_complexity Low_complexity 1 22 0 1 1013 21 0 0 0 chrX 56133229 56133250 -110517046 + AT_rich Low_complexity Low_complexity 1 21 0 1 1013 252 0 0 0 chrX 56133693 56133721 -110516575 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1013 3782 65 0 0 chrX 56133833 56134310 -110515986 + L1Md_T LINE L1 6106 6582 0 1 1013 405 129 0 0 chrX 56134705 56134775 -110515521 + (CA)n Simple_repeat Simple_repeat 1 70 0 1 1013 267 319 0 0 chrX 56135386 56135477 -110514819 - L1MB4 LINE L1 -6205 402 312 1 1013 4885 245 68 35 chrX 56135667 56136964 -110513332 + Lx7 LINE L1 6186 7524 -172 1 1013 1350 86 21 5 chrX 56136964 56137151 -110513145 - B2_Mm2 SINE B2 -5 190 1 1 1013 4885 245 68 35 chrX 56137151 56137315 -110512981 + Lx7 LINE L1 7525 7696 0 1 1013 1589 217 75 5 chrX 56137394 56137783 -110512513 + Lx7 LINE L1 6662 7077 -619 1 1013 341 442 40 24 chrX 56137886 56138259 -110512037 + LTR33 LTR ERVL 1 379 -136 1 1013 32474 84 7 7 chrX 56140435 56146652 -110503644 - L1Md_F2 LINE L1 0 6582 386 1 1013 431 292 53 67 chrX 56148214 56148423 -110501873 + Lx8 LINE L1 7171 7376 -97 1 1013 336 93 0 39 chrX 56148618 56148696 -110501600 + (TTA)n Simple_repeat Simple_repeat 1 75 0 1 1013 426 302 77 6 chrX 56148743 56148913 -110501383 + Lx6 LINE L1 7223 7404 -56 1 1013 1701 110 46 25 chrX 56148913 56149193 -110501103 + Lx3C LINE L1 6691 6976 0 1 1013 386 243 38 63 chrX 56149471 56149565 -110500731 - Lx7 LINE L1 -7 7689 7591 1 1013 3461 20 5 0 chrX 56149565 56149959 -110500337 + MTA_Mm LTR MaLR 1 396 0 1 1013 9378 17 12 1 chrX 56149959 56151045 -110499251 + MTA_Mm-int LTR MaLR 1 1098 0 1 1013 3485 15 5 0 chrX 56151045 56151439 -110498857 + MTA_Mm LTR MaLR 1 396 0 1 1013 386 243 38 63 chrX 56151439 56151500 -110498796 - Lx7 LINE L1 -106 7590 7538 1 1013 404 67 17 0 chrX 56152514 56152574 -110497722 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 1013 680 388 48 37 chrX 56153615 56154049 -110496247 - LTR16A LTR ERVL -7 444 6 2 1013 279 336 90 110 chrX 56154106 56154460 -110495836 - MLT2B2 LTR ERVL -166 349 3 2 1013 1103 85 0 0 chrX 56155475 56155616 -110494680 + B1_Mm SINE Alu 4 144 -3 2 1013 396 0 0 0 chrX 56155616 56155660 -110494636 + (TAA)n Simple_repeat Simple_repeat 2 45 0 2 1013 6156 218 89 55 chrX 56155901 56157633 -110492663 - Lx6 LINE L1 -4 7456 5666 2 1013 255 227 99 9 chrX 56157698 56157809 -110492487 - L1MA7 LINE L1 -12 6279 6159 2 1013 391 268 142 3 chrX 56157805 56158096 -110492200 - L1MA7 LINE L1 -235 6056 5716 2 1013 753 244 78 0 chrX 56158596 56158789 -110491507 + B3 SINE B2 5 212 -4 2 1013 4110 58 0 0 chrX 56160115 56160647 -110489649 - L1_Mus1 LINE L1 -193 6374 5843 2 1013 1192 116 0 127 chrX 56160647 56160888 -110489408 + L1Md_F2 LINE L1 6383 6582 0 2 1013 216 258 0 16 chrX 56161083 56161146 -110489150 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 1013 727 295 16 75 chrX 56161148 56161456 -110488840 - B4A SINE B4 0 292 3 2 1013 501 338 47 0 chrX 56161644 56161792 -110488504 + RSINE1 SINE B4 11 165 0 2 1013 239 79 0 26 chrX 56161795 56161834 -110488462 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 2 1013 295 258 30 0 chrX 56161860 56161926 -110488370 + ID4_ SINE ID 13 80 -3 2 1013 2328 208 76 6 chrX 56162793 56163331 -110486965 + Lx5 LINE L1 6475 7050 0 2 1013 278 198 18 0 chrX 56163366 56163477 -110486819 + (CAGAGA)n Simple_repeat Simple_repeat 4 116 0 2 1013 232 174 21 21 chrX 56163955 56164002 -110486294 + CT-rich Low_complexity Low_complexity 5 51 0 2 1013 271 191 12 0 chrX 56164002 56164086 -110486210 - Lx4A LINE L1 0 7058 6974 2 1013 36 0 0 0 chrX 56164122 56164158 -110486138 + AT_rich Low_complexity Low_complexity 1 36 0 2 1013 662 123 55 28 chrX 56164159 56164268 -110486028 - B1_Mm SINE Alu -7 140 29 2 1013 603 170 107 27 chrX 56164268 56164335 -110485961 + Lx LINE L1 6453 6518 -136 2 1013 396 0 0 0 chrX 56164335 56164379 -110485917 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1013 603 170 107 27 chrX 56164379 56164498 -110485798 + Lx LINE L1 6519 6652 -2 2 1013 386 200 75 14 chrX 56165230 56165343 -110484953 - Lx3C LINE L1 -4 6972 6852 2 1013 189 0 0 0 chrX 56165343 56165364 -110484932 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1013 386 200 75 14 chrX 56165364 56165397 -110484899 - Lx3C LINE L1 -125 6851 6817 2 1013 348 236 172 37 chrX 56165390 56165553 -110484743 + Lx7 LINE L1 7183 7367 -329 2 1013 198 103 0 0 chrX 56165556 56165585 -110484711 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 2 1013 1196 68 0 0 chrX 56165586 56165733 -110484563 - B1_Mus1 SINE Alu 0 148 2 2 1013 707 109 45 0 chrX 56165748 56165858 -110484438 - B1_Mus2 SINE Alu 0 147 33 2 1013 420 97 0 0 chrX 56165862 56165924 -110484372 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 2 1013 849 107 0 0 chrX 56165974 56166105 -110484191 + (TCTCCC)n Simple_repeat Simple_repeat 3 133 0 2 1013 254 376 8 0 chrX 56166126 56166251 -110484045 + (TG)n Simple_repeat Simple_repeat 1 126 0 2 1013 242 217 14 28 chrX 56166285 56166356 -110483940 + T-rich Low_complexity Low_complexity 5 74 0 2 1013 314 130 0 36 chrX 56166357 56166413 -110483883 - B1_Mus2 SINE Alu 0 147 94 2 1013 267 38 37 37 chrX 56166415 56166469 -110483827 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 2 1013 24 0 0 0 chrX 56166551 56166575 -110483721 + AT_rich Low_complexity Low_complexity 1 24 0 2 1013 29146 25 0 0 chrX 56166917 56171270 -110479026 - L1Md_T LINE L1 0 6582 2231 2 1013 864 55 0 0 chrX 56171271 56171381 -110478915 + (TTTC)n Simple_repeat Simple_repeat 2 111 0 2 1013 353 240 0 39 chrX 56173711 56173789 -110476507 - RMER21B LTR ERV1 0 842 768 2 1013 2792 220 163 89 chrX 56173796 56174674 -110475622 - RMER21A LTR ERV1 -4 943 1 2 1013 4977 147 26 11 chrX 56175315 56176245 -110474051 - Lx2B LINE L1 -250 6750 5807 2 1013 297 0 0 0 chrX 56176248 56176281 -110474015 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1013 207 0 0 0 chrX 56176315 56176338 -110473958 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1013 570 360 7 0 chrX 56176650 56176800 -110473496 + RSINE1 SINE B4 4 154 -11 2 1013 228 35 0 0 chrX 56176806 56176835 -110473461 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2 1013 733 297 26 0 chrX 56176844 56177036 -110473260 + B3A SINE B2 1 197 -1 2 1013 188 328 124 31 chrX 56177070 56177199 -110473097 + L3 LINE CR1 4213 4353 -136 2 1013 280 412 88 0 chrX 56178202 56178350 -110471946 + LTR33A LTR ERVL 116 276 -244 2 1013 591 15 0 0 chrX 56179031 56179099 -110471197 + (GA)n Simple_repeat Simple_repeat 1 68 0 2 1013 198 71 0 0 chrX 56179938 56179966 -110470330 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 2 1013 372 43 0 0 chrX 56181445 56181491 -110468805 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1013 3707 70 0 2 chrX 56182047 56182559 -110467737 + L1_Mm LINE L1 4795 5305 -578 2 1013 4104 153 12 19 chrX 56182547 56183724 -110466572 + L1Md_F2 LINE L1 410 1574 -4309 2 1013 8465 69 13 0 chrX 56183721 56184736 -110465560 + L1Md_F2 LINE L1 4216 5234 -649 2 1013 207 0 0 0 chrX 56184736 56184759 -110465537 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 1013 8465 69 13 0 chrX 56184759 56184933 -110465363 + L1Md_F2 LINE L1 5235 5418 -465 2 1013 6727 50 23 2 chrX 56184944 56185798 -110464498 + L1Md_F2 LINE L1 5709 6580 -2 2 1013 7004 71 12 2 chrX 56185796 56186726 -110463570 + L1Md_F2 LINE L1 5642 6580 -2 2 1013 2231 73 16 13 chrX 56186936 56187254 -110463042 + L1Md_F2 LINE L1 5267 5585 -298 2 1013 7476 63 24 7 chrX 56187255 56188233 -110462063 + L1Md_F2 LINE L1 5587 6580 -2 2 1013 363 60 0 0 chrX 56188623 56188673 -110461623 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1013 251 312 115 9 chrX 56188683 56188796 -110461500 - RSINE1 SINE B4 -38 127 3 2 1013 1841 178 72 8 chrX 56191318 56191833 -110458463 - Lx2B LINE L1 0 7000 6072 2 1013 966 288 58 39 chrX 56192004 56192673 -110457623 - L1MA5A LINE L1 -361 5936 5255 2 1013 1307 265 53 11 chrX 56192705 56193140 -110457156 + RLTR12B LTR ERVK 1 453 -75 2 1013 25 31 0 0 chrX 56193183 56193215 -110457081 + AT_rich Low_complexity Low_complexity 1 32 0 2 1013 255 299 212 22 chrX 56193226 56193633 -110456663 - L1MA5A LINE L1 -921 5222 4739 2 1013 222 262 62 159 chrX 56193655 56193800 -110456496 - B4 SINE B4 -153 139 9 2 1013 228 275 0 68 chrX 56193809 56193926 -110456370 - L1_Mur3 LINE L1 -1509 4371 4263 2 1013 1202 231 120 26 chrX 56193982 56194145 -110456151 + ORR1D1 LTR MaLR 1 185 -189 2 1013 5103 70 21 12 chrX 56194145 56194825 -110455471 + L1_Mus1 LINE L1 5876 6561 -6 2 1013 1202 231 120 26 chrX 56194825 56195003 -110455293 + ORR1D1 LTR MaLR 186 374 0 2 1013 321 289 70 7 chrX 56195010 56195153 -110455143 - L1MA5A LINE L1 -1931 4209 4058 2 1013 1736 204 18 39 chrX 56195850 56196284 -110454012 - Lx2B LINE L1 -3 6997 6573 2 1013 2366 197 7 56 chrX 56196278 56197074 -110453222 + Lx LINE L1 5509 6237 -417 2 1013 6174 79 44 0 chrX 56197298 56198187 -110452109 - L1_Mus3 LINE L1 -2 6636 5709 2 1013 1846 178 98 3 chrX 56198859 56199197 -110451099 + ORR1C1 LTR MaLR 1 370 -8 2 1013 761 309 34 4 chrX 56200197 56200463 -110449833 + B4A SINE B4 1 274 -18 2 1013 1702 74 0 0 chrX 56202438 56202697 -110447599 + L1_Mus1 LINE L1 6345 6567 0 2 1013 353 410 35 6 chrX 56203022 56203196 -110447100 + MLT1A1 LTR MaLR 150 328 -80 2 1013 294 95 0 0 chrX 56204724 56204766 -110445530 + (TC)n Simple_repeat Simple_repeat 2 43 0 2 1013 417 140 26 78 chrX 56204766 56204882 -110445414 - RMER17B LTR ERVK -499 459 350 2 1013 698 101 235 0 chrX 56205025 56205144 -110445152 - B1_Mus1 SINE Alu 0 148 2 2 1013 1745 193 14 19 chrX 56205348 56205718 -110444578 + Lx LINE L1 6284 6651 -3 2 1013 5330 55 3 1 chrX 56205751 56206423 -110443873 - L1Md_F2 LINE L1 -1 6581 5909 2 1013 37 0 0 0 chrX 56206764 56206801 -110443495 + AT_rich Low_complexity Low_complexity 1 37 0 2 1013 287 269 77 0 chrX 56207130 56207208 -110443088 - PB1D7 SINE Alu -25 95 12 2 1013 413 261 38 42 chrX 56207874 56208086 -110442210 - L1MEc LINE L1 -5507 893 683 2 1013 443 332 117 4 chrX 56208232 56208471 -110441825 - L1MEc LINE L1 -6007 393 128 2 1013 440 184 42 14 chrX 56208740 56208883 -110441413 + Lx3_Mus LINE L1 6859 7005 -4 2 1013 485 121 12 0 chrX 56208969 56209052 -110441244 + (TA)n Simple_repeat Simple_repeat 2 85 0 2 1013 271 310 146 0 chrX 56210034 56210138 -110440158 - B1F1 SINE Alu 0 120 3 2 1013 268 268 88 49 chrX 56210050 56210152 -110440144 - MT2B2 LTR ERVL -328 256 151 2 1013 226 324 47 8 chrX 56210581 56210839 -110439457 - L1MD LINE L1 -2921 3225 2958 2 1013 452 62 0 15 chrX 56211141 56211206 -110439090 + (TTTC)n Simple_repeat Simple_repeat 3 66 0 2 1013 216 197 49 0 chrX 56211517 56211578 -110438718 + (TAAA)n Simple_repeat Simple_repeat 2 65 0 2 1013 21 0 0 0 chrX 56211599 56211620 -110438676 + AT_rich Low_complexity Low_complexity 1 21 0 2 1013 310 329 57 38 chrX 56212303 56212461 -110437835 + MLT1C LTR MaLR 116 276 -191 2 1013 370 357 46 74 chrX 56212481 56212832 -110437464 + MLT-int LTR MaLR 1387 1727 -8 2 1013 291 279 143 69 chrX 56212891 56213080 -110437216 + MLT1C LTR MaLR 65 267 -200 2 1013 423 0 0 0 chrX 56213125 56213172 -110437124 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 2 1013 1121 300 105 11 chrX 56213742 56214123 -110436173 - MTD LTR MaLR 0 419 3 2 1013 2454 219 78 9 chrX 56214246 56214877 -110435419 - Lx2B LINE L1 -13 6987 6314 2 1013 292 323 54 0 chrX 56215042 56215135 -110435161 + PB1D10 SINE Alu 19 116 -1 2 1013 318 315 11 11 chrX 56215171 56215261 -110435035 + B1F SINE Alu 43 132 -17 2 1013 3262 43 8 0 chrX 56215405 56215798 -110434498 - MTA_Mm LTR MaLR 0 396 1 2 1013 21 57 0 0 chrX 56215989 56216024 -110434272 + AT_rich Low_complexity Low_complexity 1 35 0 2 1013 227 291 50 12 chrX 56216144 56216224 -110434072 - L2 LINE L2 -532 2887 2805 2 1013 361 261 55 55 chrX 56218104 56218303 -110431993 - Lx8 LINE L1 -4 7469 7271 2 1013 2025 180 95 0 chrX 56218394 56218772 -110431524 + MT2A LTR ERVL 101 514 -19 3 1013 3541 158 42 3 chrX 56218833 56219481 -110430815 - Lx4A LINE L1 -386 6672 6000 3 1013 2074 191 0 41 chrX 56219481 56219873 -110430423 + Lx4A LINE L1 6680 7055 -3 3 1013 2831 64 38 15 chrX 56219880 56220275 -110430021 + L1Md_F2 LINE L1 6175 6578 -4 3 1013 239 300 50 0 chrX 56220279 56220359 -110429937 - Lx8 LINE L1 -859 6614 6531 2 1013 32 0 0 0 chrX 56220510 56220542 -110429754 + AT_rich Low_complexity Low_complexity 1 32 0 3 1013 195 308 31 0 chrX 56220790 56220855 -110429441 - L3 LINE CR1 -859 3630 3564 3 1013 1476 107 0 0 chrX 56222743 56222958 -110427338 + L1_Mus2 LINE L1 6352 6566 0 3 1013 329 250 0 0 chrX 56223068 56223136 -110427160 + ID4 SINE ID 6 73 -10 3 1013 337 195 125 11 chrX 56223168 56223256 -110427040 + MLT1A1 LTR MaLR 311 408 0 3 1013 443 346 86 57 chrX 56224336 56224581 -110425715 - MTEa LTR MaLR -127 252 1 3 1013 276 217 17 0 chrX 56225100 56225160 -110425136 + MLT1A0 LTR MaLR 1 61 -347 3 1013 461 347 11 11 chrX 56225194 56225369 -110424927 + MLT1A0 LTR MaLR 29 203 -162 3 1013 831 92 34 0 chrX 56225502 56225621 -110424675 + B1_Mm SINE Alu 25 147 0 3 1013 1823 150 47 0 chrX 56225991 56226291 -110424005 + L1_Mur1 LINE L1 5569 5882 -4 3 1013 1702 229 25 45 chrX 56226287 56226736 -110423560 + Lx2B LINE L1 6502 6941 -59 3 1013 1123 279 54 69 chrX 56226885 56227406 -110422890 + RMER20B LTR ERVK 82 613 -14 3 1013 427 17 33 0 chrX 56227434 56227494 -110422802 + (CAA)n Simple_repeat Simple_repeat 2 63 0 3 1013 195 298 53 0 chrX 56227753 56227810 -110422486 - L3b LINE CR1 -238 244 185 3 1013 241 356 54 24 chrX 56229334 56229501 -110420795 + L2a LINE L2 2973 3144 -282 3 1013 23 0 0 0 chrX 56229780 56229803 -110420493 + AT_rich Low_complexity Low_complexity 1 23 0 3 1014 21 0 0 0 chrX 56230394 56230415 -110419881 + AT_rich Low_complexity Low_complexity 1 21 0 3 1014 221 338 42 46 chrX 56230729 56230868 -110419428 + MIR3 SINE MIR 24 154 -54 3 1014 1052 183 180 12 chrX 56231010 56231265 -110419031 - Lx4B LINE L1 -13 7045 6748 3 1014 393 319 67 31 chrX 56231273 56231467 -110418829 + L1MEg LINE L1 1847 2047 -4195 3 1014 24 32 0 0 chrX 56231717 56231748 -110418548 + AT_rich Low_complexity Low_complexity 1 31 0 3 1014 2649 235 29 88 chrX 56231748 56231876 -110418420 + Lx5 LINE L1 6303 6381 -669 3 1014 953 65 7 35 chrX 56231876 56232019 -110418277 - L1_Mus2 LINE L1 0 6566 6428 3 1014 2649 220 32 76 chrX 56232019 56232383 -110417913 + Lx5 LINE L1 6382 6749 -301 3 1014 2752 74 25 0 chrX 56232383 56232750 -110417546 - L1_Mus2 LINE L1 -1 6565 6190 3 1014 2649 220 32 76 chrX 56232750 56232896 -110417400 + Lx5 LINE L1 6750 6890 -160 3 1014 246 300 10 29 chrX 56233063 56233166 -110417130 + Lx6 LINE L1 7325 7425 -35 3 1014 340 234 11 0 chrX 56233186 56233280 -110417016 - Lx9 LINE L1 -7 7637 7543 3 1014 297 0 0 0 chrX 56233306 56233339 -110416957 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1014 4041 225 43 3 chrX 56233374 56234240 -110416056 - Lx9 LINE L1 -232 7412 6513 3 1014 183 42 0 0 chrX 56234270 56234294 -110416002 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 1014 189 0 0 0 chrX 56234296 56234317 -110415979 + (GA)n Simple_repeat Simple_repeat 1 21 0 3 1014 291 114 0 0 chrX 56234509 56234553 -110415743 + (A)n Simple_repeat Simple_repeat 1 44 0 3 1014 2957 199 62 71 chrX 56234815 56235508 -110414788 + RMER1B Other Other 369 1055 -11 3 1014 40 67 0 0 chrX 56235711 56235786 -110414510 + AT_rich Low_complexity Low_complexity 1 75 0 3 1014 533 288 122 47 chrX 56235991 56236497 -110413799 + L1MEg LINE L1 4476 5019 -1127 3 1014 1069 248 28 38 chrX 56236508 56236826 -110413470 + L1ME2z LINE L1 5781 6095 -349 3 1014 630 203 132 16 chrX 56237069 56237259 -110413037 + Lx7 LINE L1 7485 7696 0 3 1014 4211 132 39 21 chrX 56237366 56238109 -110412187 - RMER6A LTR ERVK 0 756 1 3 1014 475 251 37 28 chrX 56238160 56238330 -110411966 + B3A SINE B2 1 173 -22 3 1014 1099 41 6 64 chrX 56238330 56238487 -110411809 + B1_Mus1 SINE Alu 1 148 0 3 1014 387 291 80 43 chrX 56238487 56238503 -110411793 + B2_Mm2 SINE B2 174 194 -1 3 1014 899 230 52 0 chrX 56238788 56239001 -110411295 - URR1B DNA MER1_type -1 224 1 3 1014 691 294 134 27 chrX 56239073 56239409 -110410887 - RMER5 LTR ERV1 -2 532 161 3 1014 2054 130 110 0 chrX 56239689 56240044 -110410252 + Lx2A1 LINE L1 6615 7008 0 3 1014 180 0 0 0 chrX 56240224 56240244 -110410052 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3 1014 7314 51 28 19 chrX 56240766 56241712 -110408584 - L1Md_F2 LINE L1 -23 6559 5606 3 1014 267 295 21 21 chrX 56242204 56242301 -110407995 + CT-rich Low_complexity Low_complexity 6 102 0 3 1014 285 287 43 0 chrX 56242314 56242408 -110407888 - PB1D10 SINE Alu -15 102 5 3 1014 24 24 0 24 chrX 56242815 56242840 -110407456 + AT_rich Low_complexity Low_complexity 1 25 0 3 1014 820 213 0 0 chrX 56242840 56242981 -110407315 + B1_Mur3 SINE Alu 2 142 -7 3 1014 24 24 0 24 chrX 56242981 56242997 -110407299 + AT_rich Low_complexity Low_complexity 1 16 0 3 1014 252 0 0 0 chrX 56243030 56243058 -110407238 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 1014 2130 321 66 20 chrX 56243319 56244151 -110406145 - Lx8 LINE L1 -356 7117 6248 3 1014 1896 140 184 2 chrX 56244263 56244665 -110405631 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1014 238 311 70 70 chrX 56244748 56244823 -110405473 - PB1D7 SINE Alu -2 118 52 3 1014 663 25 0 0 chrX 56244823 56244904 -110405392 + (TTCC)n Simple_repeat Simple_repeat 3 83 0 3 1014 238 311 70 70 chrX 56244904 56244942 -110405354 - PB1D7 SINE Alu -69 51 7 3 1014 24 53 0 0 chrX 56245751 56245789 -110404507 + AT_rich Low_complexity Low_complexity 1 38 0 3 1014 333 0 0 0 chrX 56246762 56246799 -110403497 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 1014 180 0 0 0 chrX 56246799 56246818 -110403478 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 1014 261 310 133 48 chrX 56246831 56246936 -110403360 - RSINE1 SINE B4 -18 147 34 3 1014 197 209 15 0 chrX 56246962 56247029 -110403267 + CT-rich Low_complexity Low_complexity 1 68 0 3 1014 504 276 138 20 chrX 56247130 56247333 -110402963 - Lx8 LINE L1 -5 7468 7242 3 1014 4032 96 18 2 chrX 56248033 56248595 -110401701 - L1_Mus4 LINE L1 -7 6629 6059 3 1014 3453 68 13 4 chrX 56248595 56249052 -110401244 + L1_Mus4 LINE L1 5612 6072 -564 3 1014 417 109 0 0 chrX 56250297 56250361 -110399935 + (TTTC)n Simple_repeat Simple_repeat 2 65 0 3 1014 198 0 0 0 chrX 56251554 56251576 -110398720 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1014 409 284 71 0 chrX 56251648 56251803 -110398493 - L1ME1 LINE L1 -2 6177 6012 3 1014 2359 105 6 6 chrX 56252132 56252478 -110397818 + L1_Mus3 LINE L1 6279 6624 -14 3 1014 318 26 0 0 chrX 56252481 56252520 -110397776 + (GA)n Simple_repeat Simple_repeat 1 39 0 3 1014 2926 127 106 4 chrX 56252584 56253092 -110397204 - Lx2 LINE L1 -2 6995 6436 3 1014 644 326 66 47 chrX 56253134 56253620 -110396676 - Charlie7 DNA MER1_type -2034 578 84 3 1014 2153 265 119 14 chrX 56253841 56254472 -110395824 - Lx5 LINE L1 -18 7442 6746 3 1014 700 143 28 31 chrX 56254488 56254653 -110395643 - L1_Mus3 LINE L1 -1 6653 6461 3 1014 3603 138 34 5 chrX 56254643 56255238 -110395058 + L1_Mm LINE L1 4984 5595 -288 3 1014 3601 198 42 8 chrX 56255239 56256450 -110393846 - Lx5 LINE L1 -733 6727 5228 3 1014 519 228 29 23 chrX 56256442 56256613 -110393683 - Lx5 LINE L1 -6689 1039 868 3 1014 2451 305 96 19 chrX 56256725 56257765 -110392531 - Lx9 LINE L1 -233 7411 6321 3 1014 347 371 119 76 chrX 56257952 56258426 -110391870 - MLT1H LTR MaLR -57 498 40 3 1014 346 348 72 53 chrX 56258944 56259263 -110391033 - L3 LINE CR1 -335 4154 3830 3 1014 587 252 7 28 chrX 56259307 56259450 -110390846 - B1_Mur2 SINE Alu -1 148 9 3 1014 263 354 44 78 chrX 56259525 56259730 -110390566 + LTR83 LTR ERVL 49 246 -534 3 1014 195 324 48 0 chrX 56260188 56260293 -110390003 - MIRc SINE MIR -114 154 45 3 1014 584 216 159 80 chrX 56260680 56260881 -110389415 + URR1B DNA MER1_type 6 222 -3 3 1014 332 179 26 0 chrX 56260891 56260969 -110389327 - Lx9 LINE L1 -61 7583 7504 3 1014 381 143 63 0 chrX 56262004 56262067 -110388229 - Lx2 LINE L1 -774 6223 6157 3 1014 1249 125 0 0 chrX 56262063 56262239 -110388057 + Lx2 LINE L1 6215 6390 -607 3 1014 2380 110 29 3 chrX 56262239 56262614 -110387682 + Lx2 LINE L1 6606 6990 -7 3 1014 1043 179 0 35 chrX 56262614 56262634 -110387662 + Lx2B LINE L1 6390 6403 -597 3 1014 3361 86 0 0 chrX 56262816 56263269 -110387027 - Lx3_Mus LINE L1 -24 6985 6533 3 1014 278 272 21 21 chrX 56263265 56263359 -110386937 - Lx4B LINE L1 -58 7000 6907 3 1014 496 269 92 0 chrX 56263486 56263616 -110386680 - B1_Mur2 SINE Alu -7 142 1 3 1014 780 68 0 0 chrX 56263722 56263825 -110386471 + (TTC)n Simple_repeat Simple_repeat 3 105 0 3 1014 351 0 0 0 chrX 56263825 56263864 -110386432 + (TC)n Simple_repeat Simple_repeat 1 39 0 3 1014 4397 57 2 2 chrX 56264258 56264807 -110385489 + L1_Mus2 LINE L1 6018 6566 0 3 1014 570 280 69 10 chrX 56264889 56265091 -110385205 + B3 SINE B2 2 215 -1 3 1014 322 249 99 75 chrX 56265256 56265508 -110384788 - L1MEc LINE L1 -628 5989 5732 3 1014 236 256 66 22 chrX 56267324 56267460 -110382836 - L1MEc LINE L1 -2321 3998 3857 3 1014 469 245 21 7 chrX 56267472 56267612 -110382684 - Lx6 LINE L1 -128 7332 7191 3 1014 441 264 174 22 chrX 56267686 56268007 -110382289 - L1MEc LINE L1 -2571 3748 3379 3 1014 2514 240 40 9 chrX 56268162 56268819 -110381477 - Lx9 LINE L1 -28 7616 6940 3 1014 600 14 0 0 chrX 56268819 56268888 -110381408 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 1014 267 31 0 0 chrX 56268888 56268919 -110381377 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 1014 465 272 52 29 chrX 56268933 56269107 -110381189 + Lx7 LINE L1 6792 6969 -727 3 1014 697 313 72 16 chrX 56269110 56269430 -110380866 + Lx8 LINE L1 6646 7136 -508 3 1014 338 316 165 57 chrX 56269549 56270093 -110380203 - L1MEc LINE L1 -5623 777 175 3 1014 306 0 0 0 chrX 56270251 56270285 -110380011 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1014 309 320 220 46 chrX 56270493 56270843 -110379453 - MLT1E3 LTR MaLR -2 622 212 3 1014 26 50 0 0 chrX 56270897 56270937 -110379359 + AT_rich Low_complexity Low_complexity 1 40 0 3 1014 315 122 0 0 chrX 56271035 56271084 -110379212 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1014 198 0 0 0 chrX 56271084 56271106 -110379190 + (TG)n Simple_repeat Simple_repeat 2 23 0 3 1014 478 245 5 180 chrX 56271121 56271315 -110378981 + B3A SINE B2 35 216 0 4 1014 796 309 98 34 chrX 56271315 56271514 -110378782 - Lx8 LINE L1 -238 7235 7020 4 1014 231 36 0 0 chrX 56271514 56271542 -110378754 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1014 796 309 98 34 chrX 56271542 56271670 -110378626 - Lx8 LINE L1 -454 7019 6888 4 1014 253 283 110 28 chrX 56271675 56271784 -110378512 - MLT1E3 LTR MaLR -463 161 44 3 1014 258 32 0 0 chrX 56272461 56272492 -110377804 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 4 1014 596 293 7 20 chrX 56272504 56272654 -110377642 - B3 SINE B2 -10 206 59 4 1014 355 206 0 0 chrX 56272661 56272734 -110377562 + L1_Mur3 LINE L1 5781 5853 -27 4 1014 23 0 0 0 chrX 56273069 56273092 -110377204 + AT_rich Low_complexity Low_complexity 1 23 0 4 1014 588 293 6 49 chrX 56273163 56273346 -110376950 - B3A SINE B2 0 198 24 4 1014 21 36 0 0 chrX 56273389 56273417 -110376879 + AT_rich Low_complexity Low_complexity 1 28 0 4 1014 864 355 52 33 chrX 56273706 56274248 -110376048 - Lx9 LINE L1 -497 7147 6596 4 1014 242 170 0 54 chrX 56274397 56274453 -110375843 + (TATAA)n Simple_repeat Simple_repeat 5 57 0 4 1014 224 77 26 0 chrX 56274844 56274883 -110375413 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 4 1014 1315 293 96 58 chrX 56275738 56276329 -110373967 - Lx8 LINE L1 -1 7472 6859 4 1014 180 77 0 0 chrX 56276330 56276356 -110373940 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 1014 1690 294 59 20 chrX 56276380 56276891 -110373405 - Lx8 LINE L1 -746 6727 6197 4 1014 423 0 0 0 chrX 56276892 56276939 -110373357 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1014 279 79 0 0 chrX 56276957 56276995 -110373301 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 1014 501 97 0 0 chrX 56277385 56277457 -110372839 + (TAGA)n Simple_repeat Simple_repeat 3 74 0 4 1014 35 0 0 0 chrX 56277620 56277655 -110372641 + AT_rich Low_complexity Low_complexity 1 35 0 4 1014 1041 198 115 4 chrX 56278028 56278048 -110372248 - RLTR19 LTR ERVK -2 497 478 4 1014 225 0 0 0 chrX 56278048 56278073 -110372223 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 4 1014 1041 200 114 8 chrX 56278073 56278341 -110371955 - RLTR19 LTR ERVK -22 477 170 4 1014 6871 117 22 3 chrX 56278341 56279912 -110370384 - L1_Mus4 LINE L1 -48 6588 4988 4 1014 1180 151 66 9 chrX 56279912 56280139 -110370157 - RLTR19 LTR ERVK -259 240 1 4 1014 3265 89 132 19 chrX 56280313 56280842 -110369454 + Lx3_Mus LINE L1 6421 7009 0 4 1014 428 0 19 0 chrX 56280909 56280961 -110369335 + (TGG)n Simple_repeat Simple_repeat 3 55 0 4 1014 330 121 0 0 chrX 56281585 56281651 -110368645 + (TTTTG)n Simple_repeat Simple_repeat 4 69 0 4 1014 910 68 9 18 chrX 56281651 56281800 -110368496 - B1_Mus2 SINE Alu 0 149 12 4 1014 371 283 54 103 chrX 56282086 56282271 -110368025 - RMER5 LTR ERV1 -339 195 20 4 1014 435 236 54 23 chrX 56282506 56282636 -110367660 + RMER5 LTR ERV1 397 530 -4 4 1014 830 106 0 0 chrX 56283096 56283219 -110367077 + URR1B DNA MER1_type 103 225 0 4 1014 269 299 129 25 chrX 56283793 56284033 -110366263 - L1M5 LINE L1 -298 5826 5562 4 1014 744 199 149 23 chrX 56284257 56284432 -110365864 + B3 SINE B2 2 198 -18 4 1014 459 0 0 0 chrX 56284845 56284896 -110365400 + (CTATA)n Simple_repeat Simple_repeat 2 52 0 4 1014 487 213 164 0 chrX 56285515 56285698 -110364598 - Lx9 LINE L1 -1 7643 7431 4 1014 1015 282 123 9 chrX 56286788 56287114 -110363182 - MTEb LTR MaLR -12 367 5 4 1014 24 0 0 0 chrX 56287476 56287500 -110362796 + AT_rich Low_complexity Low_complexity 1 24 0 4 1014 271 318 35 0 chrX 56287735 56287820 -110362476 + L2 LINE L2 1497 1584 -1835 4 1014 624 320 85 43 chrX 56287990 56288516 -110361780 - MLT1F2 LTR MaLR -2 678 1 4 1014 593 311 7 13 chrX 56288673 56288823 -110361473 + RSINE1 SINE B4 2 150 -15 4 1014 317 187 13 0 chrX 56288829 56288904 -110361392 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 4 1014 926 304 51 33 chrX 56288940 56289273 -110361023 - MLT1A1 LTR MaLR -63 345 7 4 1014 257 326 31 0 chrX 56289281 56289379 -110360917 + L1M3 LINE L1 5465 5565 -624 4 1014 340 265 126 10 chrX 56289635 56289738 -110360558 - PB1D10 SINE Alu -2 115 1 4 1014 490 320 8 0 chrX 56289738 56289797 -110360499 - ID SINE ID -143 81 22 4 1014 317 286 39 0 chrX 56289736 56289813 -110360483 - ID4_ SINE ID -2 81 2 4 1014 894 98 0 0 chrX 56289918 56290071 -110360225 + (TTTCC)n Simple_repeat Simple_repeat 5 157 0 4 1014 1428 88 14 27 chrX 56290150 56290372 -110359924 + L1_Mus3 LINE L1 6420 6638 0 4 1014 339 25 0 0 chrX 56290650 56290690 -110359606 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1014 1221 340 17 54 chrX 56290737 56290937 -110359359 - Lx8 LINE L1 -63 7410 7228 4 1014 920 63 0 0 chrX 56290937 56291063 -110359233 + L1_Mus1 LINE L1 6442 6567 0 4 1014 1221 340 17 54 chrX 56291063 56291332 -110358964 - Lx8 LINE L1 -246 7227 6963 4 1014 1153 219 180 6 chrX 56291332 56291649 -110358647 + ORR1D1 LTR MaLR 1 372 -2 4 1014 1221 340 17 54 chrX 56291649 56291824 -110358472 - Lx8 LINE L1 -511 6962 6789 4 1014 1000 119 13 0 chrX 56291827 56291986 -110358310 + URR1A DNA MER1_type 66 226 0 4 1014 2287 240 35 28 chrX 56292120 56292664 -110357632 - RMER1C Other Other -7 1335 788 4 1014 259 298 28 37 chrX 56292701 56292809 -110357487 - RMER1C Other Other -1200 142 36 4 1014 479 269 83 33 chrX 56292879 56293121 -110357175 - L1MB2 LINE L1 -8 6163 5910 4 1014 333 317 9 19 chrX 56293133 56293239 -110357057 - MLT1A1 LTR MaLR -8 400 296 4 1014 393 22 0 0 chrX 56293803 56293849 -110356447 + (GACTG)n Simple_repeat Simple_repeat 3 48 0 4 1014 327 295 26 0 chrX 56293949 56294027 -110356269 - RSINE1 SINE B4 -84 81 2 4 1014 2010 182 30 69 chrX 56294149 56294371 -110355925 + L1_Mur3 LINE L1 1871 2074 -3806 4 1014 504 59 0 0 chrX 56294371 56294439 -110355857 + (CCA)n Simple_repeat Simple_repeat 1 68 0 4 1014 2010 182 30 69 chrX 56294439 56294754 -110355542 + L1_Mur3 LINE L1 2075 2387 -3493 4 1014 1241 249 31 35 chrX 56294757 56295168 -110355128 + Lx5 LINE L1 6455 6886 -574 4 1014 667 272 0 11 chrX 56295180 56295355 -110354941 + Lx5 LINE L1 7257 7429 -31 4 1014 284 290 190 48 chrX 56295449 56295869 -110354427 + L1ME1 LINE L1 5318 5818 -346 4 1014 271 244 0 24 chrX 56296063 56296147 -110354149 + L1ME1 LINE L1 6018 6099 -80 4 1014 1672 228 28 56 chrX 56296776 56297203 -110353093 + MTD LTR MaLR 1 415 -4 4 1014 343 354 65 57 chrX 56297208 56297487 -110352809 - MLT1K LTR MaLR -166 429 149 4 1014 228 241 0 53 chrX 56298089 56298146 -110352150 - LTR78 LTR ERV1 -424 880 827 4 1014 483 18 0 0 chrX 56299012 56299068 -110351228 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 4 1014 1388 82 14 9 chrX 56300361 56300571 -110349725 - Lx3_Mus LINE L1 -9 7000 6790 4 1014 8245 87 0 9 chrX 56300571 56301741 -110348555 + L1_Mur1 LINE L1 4405 5563 -323 4 1014 21 36 0 0 chrX 56301915 56301943 -110348353 + AT_rich Low_complexity Low_complexity 1 28 0 4 1014 240 342 71 48 chrX 56302035 56302161 -110348135 - Lx8 LINE L1 -205 7268 7140 4 1014 498 292 9 0 chrX 56302189 56302302 -110347994 + Lx8 LINE L1 6498 6611 -862 4 1014 819 152 28 0 chrX 56302310 56302455 -110347841 - ORR1A2 LTR MaLR -51 276 128 4 1014 2112 61 0 0 chrX 56302455 56302718 -110347578 + L1_Mus3 LINE L1 6197 6459 -179 4 1014 787 283 40 32 chrX 56302753 56303005 -110347291 - Lx8 LINE L1 -515 6958 6705 4 1014 1382 294 39 33 chrX 56303040 56303522 -110346774 - Lx8 LINE L1 -766 6707 6223 4 1014 615 27 0 0 chrX 56303744 56303817 -110346479 + (CAAAC)n Simple_repeat Simple_repeat 2 74 0 4 1014 563 164 0 16 chrX 56303855 56303979 -110346317 + GA-rich Low_complexity Low_complexity 3 124 0 4 1014 275 291 25 0 chrX 56304022 56304101 -110346195 - Lx7 LINE L1 -407 7289 7209 4 1014 285 228 21 21 chrX 56304200 56304294 -110346002 - Lx6 LINE L1 -177 7283 7190 4 1014 1010 206 0 6 chrX 56304377 56304558 -110345738 - Lx6 LINE L1 -269 7191 7012 4 1014 407 213 38 63 chrX 56304636 56304751 -110345545 + B1_Mur1 SINE Alu 2 128 -21 4 1014 676 264 97 36 chrX 56305043 56305239 -110345057 - B3 SINE B2 -8 208 1 4 1014 21 36 0 0 chrX 56305678 56305706 -110344590 + AT_rich Low_complexity Low_complexity 1 28 0 4 1014 194 387 0 19 chrX 56305964 56306072 -110344224 - MIR SINE MIR -67 195 90 4 1014 951 238 36 17 chrX 56306111 56306548 -110343748 + MERVL_2A-int LTR ERVL 101 605 -5156 4 1014 238 323 125 0 chrX 56306610 56306706 -110343590 - PB1D10 SINE Alu -7 110 3 4 1014 471 268 87 32 chrX 56306733 56306918 -110343378 - B3A SINE B2 0 198 4 4 1014 770 271 78 40 chrX 56306926 56307322 -110342974 - L1M4 LINE L1 -483 5691 5281 4 1014 514 271 168 38 chrX 56307321 56307509 -110342787 + Lx8 LINE L1 7119 7331 -142 4 1014 702 0 0 0 chrX 56307509 56307587 -110342709 + (TC)n Simple_repeat Simple_repeat 1 78 0 4 1014 514 271 168 38 chrX 56307587 56307636 -110342660 + Lx8 LINE L1 7332 7386 -87 4 1014 350 295 74 0 chrX 56307851 56308000 -110342296 - L1M4 LINE L1 -1242 4904 4745 4 1014 321 89 0 0 chrX 56308473 56308518 -110341778 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 4 1014 861 284 67 73 chrX 56308755 56309408 -110340888 - L1MA5 LINE L1 -24 6276 5628 4 1014 219 219 0 0 chrX 56309485 56309526 -110340770 + CT-rich Low_complexity Low_complexity 3 43 0 4 1014 517 315 92 0 chrX 56309555 56309685 -110340611 - RSINE1 SINE B4 -10 155 14 4 1014 1197 114 23 0 chrX 56309751 56309927 -110340369 - B2_Mm2 SINE B2 -14 181 2 4 1014 324 0 0 0 chrX 56310411 56310447 -110339849 + (TC)n Simple_repeat Simple_repeat 1 36 0 4 1014 906 19 0 0 chrX 56310447 56310554 -110339742 + (CA)n Simple_repeat Simple_repeat 1 108 0 4 1014 198 0 0 0 chrX 56311187 56311209 -110339087 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 1014 32 26 0 0 chrX 56311242 56311281 -110339015 + AT_rich Low_complexity Low_complexity 1 39 0 4 1014 2261 63 0 13 chrX 56311294 56311598 -110338698 - L1Md_F2 LINE L1 -11 6571 6272 4 1014 1770 304 79 15 chrX 56311676 56312345 -110337951 + Lx8 LINE L1 6466 7177 -296 4 1014 230 236 11 33 chrX 56312509 56312601 -110337695 + (CAAA)n Simple_repeat Simple_repeat 1 90 0 4 1014 317 250 14 8 chrX 56312601 56312683 -110337613 + ID2 SINE ID 7 83 -69 4 1014 277 350 4 0 chrX 56312698 56312783 -110337513 + PB1 SINE Alu 3 90 -224 4 1014 370 269 150 25 chrX 56313093 56313253 -110337043 + MLT1-int LTR MaLR 1 180 -1191 4 1014 21 36 0 0 chrX 56314107 56314135 -110336161 + AT_rich Low_complexity Low_complexity 1 28 0 4 1014 414 253 0 31 chrX 56314282 56314380 -110335916 + B1_Mur1 SINE Alu 43 137 -12 5 1014 621 0 0 0 chrX 56314380 56314449 -110335847 + (CAAAA)n Simple_repeat Simple_repeat 4 72 0 5 1014 870 99 0 0 chrX 56315942 56316073 -110334223 + (GA)n Simple_repeat Simple_repeat 1 131 0 5 1014 357 286 71 6 chrX 56316893 56317062 -110333234 + L1MA8 LINE L1 6100 6279 -12 5 1014 474 233 83 23 chrX 56317569 56317701 -110332595 - B1F SINE Alu 0 149 10 5 1014 241 269 26 80 chrX 56317785 56317898 -110332398 + PB1D9 SINE Alu 5 111 -9 5 1014 194 397 13 0 chrX 56317932 56318010 -110332286 - MIR SINE MIR -181 81 3 5 1014 1642 218 86 13 chrX 56318152 56318538 -110331758 + MTD LTR MaLR 1 414 -5 5 1014 3358 249 91 55 chrX 56318543 56319757 -110330539 + MTD-int LTR MaLR 1 1258 0 5 1014 1701 217 87 3 chrX 56319757 56320136 -110330160 + MTD LTR MaLR 1 411 -8 5 1014 396 316 18 54 chrX 56321198 56321365 -110328931 - RSINE1 SINE B4 -1 164 4 5 1014 291 314 8 41 chrX 56322569 56322692 -110327604 - MARNA DNA Mariner -200 386 268 5 1014 495 0 0 0 chrX 56326644 56326699 -110323597 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 1014 474 70 0 0 chrX 56326701 56326772 -110323524 + (GA)n Simple_repeat Simple_repeat 2 72 0 5 1014 837 321 65 38 chrX 56326854 56327116 -110323180 - B4A SINE B4 -21 271 3 5 1014 876 259 0 15 chrX 56327187 56327391 -110322905 + B3 SINE B2 5 205 -11 5 1014 678 13 0 0 chrX 56327877 56327956 -110322340 + (TTTC)n Simple_repeat Simple_repeat 4 82 0 5 1014 2168 70 13 3 chrX 56328466 56328765 -110321531 - L1Md_F2 LINE L1 -29 6553 6252 5 1014 672 210 0 0 chrX 56328765 56328889 -110321407 + MTC LTR MaLR 119 242 -179 5 1014 399 232 93 37 chrX 56329051 56329237 -110321059 + L1MA6 LINE L1 5055 5255 -888 5 1014 601 275 86 0 chrX 56329272 56329505 -110320791 + L1MA6 LINE L1 5341 5593 -707 5 1014 293 353 43 61 chrX 56329519 56329682 -110320614 + RSINE1 SINE B4 6 165 0 5 1014 705 304 4 23 chrX 56329704 56329970 -110320326 + L1MA6 LINE L1 5595 5855 -445 5 1014 244 336 76 9 chrX 56330214 56330319 -110319977 - B3A SINE B2 -86 112 1 5 1014 407 285 26 156 chrX 56331235 56331281 -110319015 - RSINE1 SINE B4 -29 136 101 5 1014 1257 99 5 30 chrX 56331281 56331479 -110318817 + B2_Mm2 SINE B2 3 195 0 5 1014 407 285 26 156 chrX 56331479 56331586 -110318710 - RSINE1 SINE B4 -65 100 3 5 1014 24 53 0 0 chrX 56331693 56331731 -110318565 + AT_rich Low_complexity Low_complexity 1 38 0 5 1014 553 287 0 29 chrX 56331763 56331903 -110318393 - RSINE1 SINE B4 -24 141 6 5 1014 519 112 0 0 chrX 56331967 56332047 -110318249 + (CA)n Simple_repeat Simple_repeat 1 80 0 5 1014 579 217 0 52 chrX 56332048 56332184 -110318112 + B1_Mur2 SINE Alu 21 149 0 5 1014 23 0 0 0 chrX 56332690 56332713 -110317583 + AT_rich Low_complexity Low_complexity 1 23 0 5 1014 204 135 0 0 chrX 56333013 56333050 -110317246 + (TAA)n Simple_repeat Simple_repeat 1 37 0 5 1014 180 158 0 0 chrX 56333090 56333128 -110317168 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1014 3084 46 2 10 chrX 56333345 56333741 -110316555 - L1Md_F2 LINE L1 0 6582 6190 5 1014 9749 88 34 1 chrX 56334301 56335815 -110314481 + Lx3_Mus LINE L1 5447 7006 -3 5 1014 564 116 0 0 chrX 56335817 56335903 -110314393 + (GAA)n Simple_repeat Simple_repeat 2 87 0 5 1014 720 0 0 0 chrX 56335903 56335983 -110314313 + (GGAA)n Simple_repeat Simple_repeat 2 81 0 5 1014 260 77 62 0 chrX 56338075 56338140 -110312156 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 5 1014 249 83 0 0 chrX 56338752 56338788 -110311508 + (TAA)n Simple_repeat Simple_repeat 1 36 0 5 1014 1515 203 114 8 chrX 56339601 56339979 -110310317 + MTD LTR MaLR 2 419 0 5 1014 227 345 48 40 chrX 56340526 56340650 -110309646 + MIR SINE MIR 86 210 -52 5 1014 531 0 0 0 chrX 56340679 56340738 -110309558 + (TC)n Simple_repeat Simple_repeat 2 60 0 5 1014 553 219 77 15 chrX 56340739 56340869 -110309427 - B1_Mur2 SINE Alu -10 139 2 5 1014 524 133 234 19 chrX 56341008 56341115 -110309181 + URR1A DNA MER1_type 6 135 -91 5 1014 232 294 106 42 chrX 56341115 56341150 -110309146 - CYRA11_Mm Unknown Y-chromosome -236 381 231 5 1014 473 151 36 43 chrX 56342074 56342192 -110308104 + B3A SINE B2 5 112 -81 5 1014 887 254 5 23 chrX 56342366 56342580 -110307716 - B3 SINE B2 -6 210 1 5 1014 1985 141 16 0 chrX 56344831 56345135 -110305161 - RLTR27 LTR ERVK 0 309 1 5 1014 592 268 7 7 chrX 56345170 56345309 -110304987 - B1_Mur2 SINE Alu -2 147 9 5 1014 197 120 0 39 chrX 56345533 56345585 -110304711 + (TATAA)n Simple_repeat Simple_repeat 1 50 0 5 1014 216 0 0 0 chrX 56346280 56346304 -110303992 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 5 1014 452 326 97 0 chrX 56346316 56346460 -110303836 - RSINE1 SINE B4 -5 160 3 5 1014 351 0 0 0 chrX 56346643 56346682 -110303614 + (T)n Simple_repeat Simple_repeat 1 39 0 5 1014 657 0 0 0 chrX 56349536 56349609 -110300687 + (GGAA)n Simple_repeat Simple_repeat 4 76 0 5 1014 561 124 0 0 chrX 56350537 56350634 -110299662 + (TG)n Simple_repeat Simple_repeat 2 98 0 5 1014 412 357 64 4 chrX 56351232 56351468 -110298828 - MIR SINE MIR 0 262 13 5 1014 404 82 27 0 chrX 56352597 56352670 -110297626 + (CAGAGA)n Simple_repeat Simple_repeat 2 76 0 5 1014 218 231 15 30 chrX 56352728 56352795 -110297501 + CT-rich Low_complexity Low_complexity 4 69 0 5 1014 433 331 19 65 chrX 56352802 56352957 -110297339 - B1F SINE Alu -1 148 1 5 1014 612 238 0 31 chrX 56352961 56353091 -110297205 - ID_B1 SINE B4 0 224 99 5 1014 927 278 67 46 chrX 56353127 56353410 -110296886 - B4 SINE B4 0 292 4 5 1014 522 31 0 0 chrX 56354011 56354075 -110296221 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 1014 995 338 217 9 chrX 56354403 56355523 -110294773 - L2 LINE L2 -548 2871 1519 5 1014 212 299 51 10 chrX 56355787 56355885 -110294411 - MIR SINE MIR -17 245 144 5 1014 190 316 191 22 chrX 56355901 56356131 -110294165 - L2 LINE L2 -2084 1335 1067 5 1014 351 44 0 0 chrX 56357348 56357393 -110292903 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1014 226 207 99 99 chrX 56357419 56357510 -110292786 - RMER1C Other Other -146 1196 1106 5 1014 453 270 67 34 chrX 56357461 56357580 -110292716 - Lx8 LINE L1 -216 7257 7135 5 1015 336 299 30 17 chrX 56360960 56361083 -110289213 + PB1D7 SINE Alu 1 135 -14 5 1015 1290 100 16 5 chrX 56361948 56362139 -110288157 + B2_Mm2 SINE B2 1 193 -2 5 1015 452 33 0 0 chrX 56363174 56363235 -110287061 + L1_Mus1 LINE L1 6505 6565 -2 5 1015 795 280 46 15 chrX 56363707 56363903 -110286393 + B3 SINE B2 1 202 -14 5 1015 384 88 0 0 chrX 56363906 56363963 -110286333 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 5 1015 21 36 0 0 chrX 56364455 56364483 -110285813 + AT_rich Low_complexity Low_complexity 1 28 0 5 1015 186 43 0 0 chrX 56364681 56364704 -110285592 + (CAAAAA)n Simple_repeat Simple_repeat 6 28 0 5 1015 460 291 37 7 chrX 56365460 56365595 -110284701 + Lx8 LINE L1 7172 7310 -163 5 1015 26 0 0 0 chrX 56366876 56366902 -110283394 + AT_rich Low_complexity Low_complexity 1 26 0 5 1015 27 49 0 0 chrX 56366929 56366970 -110283326 + AT_rich Low_complexity Low_complexity 1 41 0 5 1015 336 371 0 0 chrX 56368263 56368352 -110281944 - RSINE1 SINE B4 -24 141 53 5 1015 278 317 50 64 chrX 56368800 56369097 -110281199 + L1MC4 LINE L1 7560 7852 -190 5 1015 894 287 7 47 chrX 56369183 56369483 -110280813 - B4A SINE B4 -2 290 3 5 1015 339 113 0 0 chrX 56369560 56369613 -110280683 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1015 366 23 0 0 chrX 56369638 56369681 -110280615 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1015 184 373 13 0 chrX 56369814 56369889 -110280407 - L2 LINE L2 -2569 850 775 5 1015 234 279 28 28 chrX 56370217 56370324 -110279972 - L1MA5 LINE L1 -24 6276 6170 5 1015 1079 231 254 21 chrX 56370451 56370872 -110279424 - Lx9 LINE L1 0 7644 7126 5 1015 25 0 0 0 chrX 56371083 56371108 -110279188 + AT_rich Low_complexity Low_complexity 1 25 0 5 1015 2487 45 0 22 chrX 56371194 56371514 -110278782 + L1Md_F3 LINE L1 6259 6571 -13 5 1015 5209 73 12 1 chrX 56372403 56373085 -110277211 + L1_Mus1 LINE L1 5879 6567 0 5 1015 1572 58 5 0 chrX 56373626 56373832 -110276464 + L1Md_T LINE L1 6376 6582 0 5 1015 243 349 22 72 chrX 56374135 56374274 -110276022 - L2 LINE L2 -1859 1560 1429 5 1015 539 333 39 28 chrX 56374293 56374472 -110275824 + MER58A DNA MER1_type 9 189 -35 5 1015 182 280 96 74 chrX 56374514 56374649 -110275647 + L3 LINE CR1 3996 4133 -356 5 1015 1458 192 120 24 chrX 56374779 56375120 -110275176 + ORR1D1 LTR MaLR 1 374 0 5 1015 3945 227 113 77 chrX 56375120 56375410 -110274886 + ORR1D1-int LTR MaLR 1 299 -1071 5 1015 1304 53 15 78 chrX 56375410 56375614 -110274682 + B2_Mm2 SINE B2 1 191 -4 5 1015 3945 227 113 77 chrX 56375614 56376444 -110273852 + ORR1D1-int LTR MaLR 300 1183 -187 5 1015 1190 48 0 0 chrX 56376444 56376589 -110273707 + B1_Mus2 SINE Alu 1 145 -2 5 1015 329 0 24 0 chrX 56376589 56376630 -110273666 + (TAA)n Simple_repeat Simple_repeat 2 43 0 5 1015 3945 227 113 77 chrX 56376630 56376829 -110273467 + ORR1D1-int LTR MaLR 1184 1369 -1 5 1015 1316 208 112 12 chrX 56376829 56377169 -110273127 + ORR1D1 LTR MaLR 1 374 0 5 1015 388 294 7 68 chrX 56377921 56377940 -110272356 + ID_B1 SINE B4 78 214 -10 5 1015 799 181 0 0 chrX 56377940 56378067 -110272229 + B1_Mur4 SINE Alu 14 140 -10 5 1015 302 0 0 26 chrX 56378067 56378106 -110272190 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 5 1015 27 0 0 0 chrX 56378127 56378154 -110272142 + AT_rich Low_complexity Low_complexity 1 27 0 5 1015 410 160 29 20 chrX 56378532 56378634 -110271662 + L1MA5 LINE L1 6174 6276 -24 5 1015 221 229 0 0 chrX 56381215 56381263 -110269033 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1015 271 347 46 59 chrX 56381454 56381607 -110268689 - B4A SINE B4 -58 234 84 5 1015 22 35 0 0 chrX 56381961 56381990 -110268306 + AT_rich Low_complexity Low_complexity 1 29 0 5 1015 946 147 7 0 chrX 56382089 56382232 -110268064 - B1_Mus2 SINE Alu 0 147 4 6 1015 336 83 0 0 chrX 56382234 56382282 -110268014 + (TTCA)n Simple_repeat Simple_repeat 3 50 0 6 1015 22 0 0 0 chrX 56382839 56382861 -110267435 + AT_rich Low_complexity Low_complexity 1 22 0 6 1015 180 0 0 0 chrX 56383530 56383550 -110266746 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 6 1015 482 0 17 0 chrX 56385158 56385216 -110265080 + (TA)n Simple_repeat Simple_repeat 1 59 0 6 1015 259 243 18 27 chrX 56387633 56387743 -110262553 + G-rich Low_complexity Low_complexity 6 114 0 6 1015 25 51 0 0 chrX 56388015 56388054 -110262242 + GC_rich Low_complexity Low_complexity 1 39 0 6 1015 23 0 0 0 chrX 56389892 56389915 -110260381 + AT_rich Low_complexity Low_complexity 1 23 0 6 1015 558 183 71 3 chrX 56390008 56390146 -110260150 - L1MA6 LINE L1 -161 6139 5987 6 1015 438 247 176 6 chrX 56390407 56390566 -110259730 + B3A SINE B2 1 186 -12 6 1015 200 322 0 0 chrX 56390567 56390626 -110259670 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1015 259 382 76 35 chrX 56390822 56390993 -110259303 - MamGypLTR1d LTR Gypsy -459 354 177 6 1015 234 242 0 0 chrX 56392005 56392071 -110258225 + CT-rich Low_complexity Low_complexity 3 68 0 6 1015 365 323 8 31 chrX 56393693 56393821 -110256475 - MIR SINE MIR -86 176 52 6 1015 328 324 135 37 chrX 56394768 56394983 -110255313 - MIR SINE MIR -7 255 20 6 1015 22 70 0 0 chrX 56395846 56395889 -110254407 + AT_rich Low_complexity Low_complexity 1 43 0 6 1015 3431 93 56 2 chrX 56395889 56396404 -110253892 - Lx3_Mus LINE L1 0 7009 6467 6 1015 899 218 46 0 chrX 56396455 56396652 -110253644 + B3 SINE B2 5 210 -6 6 1015 243 0 0 0 chrX 56396804 56396831 -110253465 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 1015 1752 189 53 28 chrX 56397468 56397828 -110252468 + ORR1D1 LTR MaLR 1 369 -5 6 1015 378 0 0 0 chrX 56397829 56397871 -110252425 + (TAA)n Simple_repeat Simple_repeat 2 43 0 6 1015 517 296 58 15 chrX 56398397 56398603 -110251693 + B3 SINE B2 2 216 0 6 1015 521 200 204 43 chrX 56398670 56398900 -110251396 + Lx9 LINE L1 7377 7643 -1 6 1015 189 304 18 0 chrX 56399580 56399636 -110250660 + L2c LINE L2 2406 2462 -957 6 1015 180 0 0 0 chrX 56400199 56400219 -110250077 + (A)n Simple_repeat Simple_repeat 1 20 0 6 1015 207 353 115 21 chrX 56400234 56400425 -110249871 + L2c LINE L2 3179 3387 0 6 1015 216 313 15 0 chrX 56401642 56401709 -110248587 + (ATG)n Simple_repeat Simple_repeat 1 68 0 6 1015 463 341 48 10 chrX 56401717 56401924 -110248372 - MIR SINE MIR 0 262 48 6 1015 213 122 20 39 chrX 56402605 56402656 -110247640 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 1015 750 237 59 37 chrX 56403399 56403671 -110246625 - L1MD3 LINE L1 -22 7973 7696 6 1015 486 312 54 87 chrX 56403819 56404117 -110246179 - B4 SINE B4 0 292 5 6 1015 246 313 40 20 chrX 56404405 56404506 -110245790 + Lx8 LINE L1 7046 7148 -325 6 1015 263 333 44 44 chrX 56404601 56404736 -110245560 + RMER15 LTR ERVL 426 560 -15 6 1015 736 182 20 7 chrX 56405684 56405833 -110244463 - Lx9 LINE L1 -206 7438 7288 6 1015 1538 271 68 32 chrX 56405849 56406540 -110243756 + L1MA5 LINE L1 5505 6220 -80 6 1015 24 32 0 0 chrX 56406540 56406571 -110243725 + AT_rich Low_complexity Low_complexity 1 31 0 6 1015 319 280 56 9 chrX 56406571 56406679 -110243617 - Lx4B LINE L1 -7 7051 6939 6 1015 3735 119 25 79 chrX 56406710 56407504 -110242792 + RMER17A LTR ERVK 1 751 0 6 1015 619 284 32 46 chrX 56407538 56407756 -110242540 + B3 SINE B2 2 216 0 6 1015 397 281 19 10 chrX 56407991 56408095 -110242201 - Lx7 LINE L1 -1372 6324 6220 6 1015 22 56 0 0 chrX 56409390 56409426 -110240870 + AT_rich Low_complexity Low_complexity 1 36 0 6 1015 294 23 0 0 chrX 56410055 56410106 -110240190 - L1Md_F3 LINE L1 0 6582 6531 6 1015 230 275 0 12 chrX 56410424 56410505 -110239791 + L1ME2 LINE L1 1177 1256 -4986 6 1015 382 279 102 59 chrX 56410600 56410836 -110239460 + L1ME2 LINE L1 1304 1549 -4693 6 1015 201 154 0 0 chrX 56411159 56411198 -110239098 + T-rich Low_complexity Low_complexity 4 42 0 6 1015 1147 62 7 0 chrX 56411203 56411348 -110238948 - B1_Mus2 SINE Alu -1 146 1 6 1015 423 274 89 13 chrX 56411360 56411597 -110238699 + L1ME2 LINE L1 2993 3247 -2899 6 1015 1012 292 103 34 chrX 56411691 56412389 -110237907 + L1ME2 LINE L1 5307 6052 -112 6 1015 451 276 67 73 chrX 56413700 56413864 -110236432 + RSINE1 SINE B4 3 165 0 6 1015 300 143 0 0 chrX 56414506 56414576 -110235720 + (A)n Simple_repeat Simple_repeat 1 70 0 6 1015 448 256 114 88 chrX 56414776 56414969 -110235327 - B3A SINE B2 0 198 1 6 1015 449 47 0 15 chrX 56415529 56415594 -110234702 + (TTTTG)n Simple_repeat Simple_repeat 3 66 0 6 1015 445 333 8 33 chrX 56416314 56416435 -110233861 + RSINE1 SINE B4 45 162 -3 6 1015 508 319 8 19 chrX 56416765 56416919 -110233377 + ID_B1 SINE B4 78 224 -68 6 1015 540 0 0 0 chrX 56419015 56419075 -110231221 + (GA)n Simple_repeat Simple_repeat 1 60 0 6 1015 597 316 7 7 chrX 56420644 56420797 -110229499 + MER45A DNA Tip100 1 153 -25 6 1015 711 0 0 0 chrX 56421372 56421451 -110228845 + (TC)n Simple_repeat Simple_repeat 2 80 0 6 1015 1603 278 85 31 chrX 56423034 56423679 -110226617 + L1MC1 LINE L1 5653 6332 -1 6 1015 576 0 0 0 chrX 56424365 56424429 -110225867 + (TC)n Simple_repeat Simple_repeat 1 64 0 6 1015 495 216 0 0 chrX 56424714 56424825 -110225471 + (TA)n Simple_repeat Simple_repeat 1 111 0 6 1015 210 37 0 0 chrX 56425157 56425184 -110225112 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1015 22 0 0 0 chrX 56425473 56425495 -110224801 + AT_rich Low_complexity Low_complexity 1 22 0 6 1015 333 254 50 0 chrX 56426008 56426108 -110224188 + B1_Mur2 SINE Alu 4 147 -2 6 1015 755 40 0 10 chrX 56427037 56427137 -110223159 + (GGGAA)n Simple_repeat Simple_repeat 4 102 0 6 1015 270 306 71 51 chrX 56427326 56427522 -110222774 - L2c LINE L2 -77 3310 3111 6 1015 439 243 55 27 chrX 56428204 56428314 -110221982 - PB1D9 SINE Alu -7 113 1 6 1015 1430 67 10 0 chrX 56428440 56428635 -110221661 + L1_Mus3 LINE L1 6435 6631 -7 6 1015 195 100 0 0 chrX 56428997 56429027 -110221269 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 6 1015 932 297 57 14 chrX 56430601 56430953 -110219343 + Charlie13a DNA Charlie 896 1262 -252 6 1015 523 244 144 11 chrX 56430957 56431131 -110219165 + B3A SINE B2 2 198 0 6 1015 27 49 0 0 chrX 56431521 56431562 -110218734 + AT_rich Low_complexity Low_complexity 1 41 0 6 1015 286 307 58 19 chrX 56431585 56431688 -110218608 + MER68 LTR ERVL 138 244 -319 6 1015 260 0 0 0 chrX 56431716 56431753 -110218543 + L1Md_F3 LINE L1 6534 6570 -14 6 1015 192 77 0 0 chrX 56431765 56431791 -110218505 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1015 792 294 85 11 chrX 56431838 56432110 -110218186 + MLT1B LTR MaLR 30 321 -69 6 1015 509 277 50 21 chrX 56433379 56433519 -110216777 - B1F SINE Alu -5 144 1 6 1015 289 350 158 32 chrX 56433836 56434057 -110216239 - MIR SINE MIR -12 250 2 6 1015 332 303 70 38 chrX 56434530 56434688 -110215608 - HAL1-3A_ME LINE L1 -419 2439 2277 6 1015 216 259 0 0 chrX 56434828 56434882 -110215414 + T-rich Low_complexity Low_complexity 3 56 0 6 1015 370 276 30 45 chrX 56434892 56435025 -110215271 - B1F SINE Alu -7 142 12 6 1015 709 243 21 0 chrX 56436028 56436168 -110214128 + RSINE1 SINE B4 2 144 -21 6 1015 293 0 0 26 chrX 56436221 56436259 -110214037 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1015 406 250 70 48 chrX 56436654 56436871 -110213425 + L1_Mur3 LINE L1 3 170 -7542 6 1015 246 246 0 74 chrX 56437109 56437181 -110213115 - PB1D10 SINE Alu -6 114 46 6 1015 447 300 8 8 chrX 56437868 56437999 -110212297 + MER3 DNA MER1_type 78 208 -1 6 1015 380 376 26 11 chrX 56438437 56438628 -110211668 + MIR SINE MIR 38 231 -31 6 1015 6348 36 1 4 chrX 56438727 56439485 -110210811 - L1Md_F2 LINE L1 -2 6580 5825 6 1015 350 74 19 0 chrX 56440074 56440128 -110210168 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1015 798 312 27 27 chrX 56440139 56440402 -110209894 - B4A SINE B4 -16 276 14 6 1015 663 269 132 22 chrX 56440411 56440527 -110209769 + MER58B DNA MER1_type 88 219 -122 6 1015 438 20 0 0 chrX 56440527 56440578 -110209718 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1015 663 269 132 22 chrX 56440578 56440689 -110209607 + MER58B DNA MER1_type 220 340 -1 6 1015 454 118 10 10 chrX 56440775 56440878 -110209418 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 6 1015 502 194 42 69 chrX 56440953 56441097 -110209199 + MTEa LTR MaLR 240 379 0 6 1015 396 243 162 36 chrX 56441648 56441790 -110208506 - MER5A1 DNA MER1_type -3 163 9 6 1015 466 265 43 29 chrX 56442093 56442233 -110208063 + ID_B1 SINE B4 61 202 -22 6 1015 252 0 0 0 chrX 56442233 56442261 -110208035 + (CAA)n Simple_repeat Simple_repeat 3 30 0 6 1015 613 195 97 60 chrX 56443049 56443234 -110207062 - MER53 DNA hAT -1 192 1 6 1015 872 210 50 0 chrX 56443452 56443652 -110206644 - B3 SINE B2 -6 210 1 6 1015 513 129 140 0 chrX 56443949 56444042 -110206254 + U6 snRNA snRNA 1 106 -1 6 1015 240 293 16 49 chrX 56444345 56444467 -110205829 + CT-rich Low_complexity Low_complexity 4 121 0 6 1015 180 0 0 0 chrX 56444750 56444770 -110205526 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 6 1015 212 0 0 35 chrX 56444843 56444872 -110205424 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 1015 224 308 81 44 chrX 56446468 56446604 -110203692 - MIR SINE MIR -119 143 3 6 1015 381 229 0 0 chrX 56446775 56446845 -110203451 - ID2 SINE ID -2 81 12 6 1015 274 209 14 69 chrX 56446782 56446854 -110203442 - B4 SINE B4 -217 75 8 7 1015 324 358 60 0 chrX 56446859 56446993 -110203303 - B1F SINE Alu -7 142 1 7 1015 433 285 30 8 chrX 56447509 56447640 -110202656 - MamRep564 Unknown Unknown -77 280 147 7 1015 201 103 0 49 chrX 56448209 56448250 -110202046 + T-rich Low_complexity Low_complexity 4 42 0 7 1015 1001 150 0 6 chrX 56449160 56449341 -110200955 + CT-rich Low_complexity Low_complexity 1 180 0 7 1015 621 179 41 0 chrX 56449343 56449466 -110200830 - B1_Mur2 SINE Alu 0 149 22 7 1015 844 246 11 0 chrX 56451531 56451710 -110198586 + B3A SINE B2 2 182 -16 7 1015 265 278 125 45 chrX 56451874 56452074 -110198222 + L1_Rod LINE L1 2179 2394 -3453 7 1015 204 40 0 0 chrX 56452121 56452146 -110198150 + (A)n Simple_repeat Simple_repeat 1 25 0 7 1015 634 253 74 34 chrX 56452156 56452332 -110197964 + B3A SINE B2 1 183 -15 7 1015 393 313 55 22 chrX 56452417 56452619 -110197677 + B4 SINE B4 3 258 -34 7 1015 215 31 0 30 chrX 56452646 56452679 -110197617 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 7 1015 517 344 78 40 chrX 56452679 56453130 -110197166 + L1MA4 LINE L1 2668 3135 -3008 7 1015 766 295 100 44 chrX 56453153 56453653 -110196643 + L1MA4 LINE L1 5489 6016 -284 7 1015 250 227 0 29 chrX 56453760 56453828 -110196468 + L1MDa LINE L1 174 239 -6301 7 1015 334 309 84 40 chrX 56453945 56454147 -110196149 + L1MDa LINE L1 402 612 -5928 7 1015 457 315 39 0 chrX 56454519 56454722 -110195574 + Lx9 LINE L1 7285 7495 -149 7 1015 22 35 0 0 chrX 56454816 56454845 -110195451 + AT_rich Low_complexity Low_complexity 1 29 0 7 1015 949 278 71 32 chrX 56454862 56455717 -110194579 + L1MDa LINE L1 935 1870 -4763 7 1015 365 310 103 7 chrX 56455894 56456040 -110194256 + Lx8 LINE L1 6335 6494 -979 7 1015 997 306 131 20 chrX 56456050 56456629 -110193667 + Lx8 LINE L1 6825 7468 -5 7 1015 325 317 78 36 chrX 56456726 56456893 -110193403 + L1M5 LINE L1 5302 5475 -704 7 1015 248 368 49 0 chrX 56456939 56457124 -110193172 + L1MD2 LINE L1 6117 6310 -49 7 1015 200 402 55 49 chrX 56457625 56457970 -110192326 + L2 LINE L2 1845 2191 -1228 7 1015 313 347 92 13 chrX 56458035 56458187 -110192109 + L2 LINE L2 2346 2509 -910 7 1015 256 281 83 62 chrX 56458227 56458371 -110191925 + B1_Mm SINE Alu 1 147 0 7 1015 393 74 52 21 chrX 56458501 56458598 -110191698 + (TTTTTG)n Simple_repeat Simple_repeat 3 102 0 7 1015 366 302 69 0 chrX 56459286 56459402 -110190894 - MLT1A0 LTR MaLR -4 370 247 7 1015 1215 221 50 3 chrX 56459671 56460101 -110190195 + L1_Mur3 LINE L1 843 1236 -5834 7 1015 2276 243 107 20 chrX 56460099 56460696 -110189600 + Lx6 LINE L1 6794 7442 -18 7 1015 661 163 7 7 chrX 56460894 56461030 -110189266 + GA-rich Low_complexity Low_complexity 3 138 0 7 1015 384 284 56 43 chrX 56461032 56461194 -110189102 - MLT1A0 LTR MaLR -189 176 13 7 1015 807 100 131 0 chrX 56461198 56461328 -110188968 + B1_Mus1 SINE Alu 2 148 0 7 1015 386 98 15 61 chrX 56461328 56461459 -110188837 + A-rich Low_complexity Low_complexity 2 126 0 7 1015 467 326 28 0 chrX 56461696 56461840 -110188456 + RSINE1 SINE B4 3 150 -15 7 1015 419 354 28 6 chrX 56462063 56462245 -110188051 - MER2 DNA MER2_type -1 344 159 7 1015 193 354 20 29 chrX 56463082 56463184 -110187112 - MIRb SINE MIR -150 118 18 7 1015 890 257 9 14 chrX 56464412 56464625 -110185671 + B3 SINE B2 1 212 -4 7 1015 316 330 59 0 chrX 56464640 56464758 -110185538 + PB1 SINE Alu 1 125 -2 7 1015 3041 3 0 0 chrX 56465123 56465463 -110184833 - L1Md_A LINE L1 0 6582 6243 7 1015 21 0 0 0 chrX 56465523 56465544 -110184752 + AT_rich Low_complexity Low_complexity 1 21 0 7 1015 237 232 43 14 chrX 56465658 56465728 -110184568 + GA-rich Low_complexity Low_complexity 1 72 0 7 1015 1627 206 65 11 chrX 56466551 56466923 -110183373 - ORR1B1 LTR MaLR -2 392 1 7 1015 2939 201 125 130 chrX 56466923 56468445 -110181851 - ORR1B1-int LTR MaLR -58 1905 427 7 1015 4008 171 45 3 chrX 56468487 56469177 -110181119 + MERVL_2A-int LTR ERVL 2844 3562 -2199 7 1015 933 185 11 66 chrX 56469177 56469411 -110180885 + MTC LTR MaLR 189 411 -10 7 1015 1143 186 47 19 chrX 56470869 56471083 -110179213 + RMER20B LTR ERVK 1 220 -407 7 1015 767 69 10 0 chrX 56471080 56471182 -110179114 + B1_Mus2 SINE Alu 45 147 0 7 1015 1529 160 0 0 chrX 56471217 56471455 -110178841 + RMER20B LTR ERVK 205 442 -185 7 1015 417 20 0 0 chrX 56471455 56471504 -110178792 - L1Md_F2 LINE L1 -639 5943 5895 7 1015 4666 63 23 5 chrX 56471504 56472121 -110178175 + L1Md_F2 LINE L1 5943 6570 -12 7 1015 1542 194 74 52 chrX 56472335 56472700 -110177596 + ORR1C2 LTR MaLR 12 384 0 7 1015 525 266 63 48 chrX 56472700 56472969 -110177327 + L1_Mur3 LINE L1 5197 5469 -411 7 1015 6307 35 3 3 chrX 56474313 56475075 -110175221 + L1Md_F3 LINE L1 5821 6582 -2 7 1015 189 235 19 19 chrX 56476646 56476698 -110173598 + L3 LINE CR1 4437 4488 -1 7 1015 286 354 8 52 chrX 56476859 56476993 -110173303 - MER58B DNA MER1_type -41 300 173 7 1015 435 296 18 9 chrX 56477003 56477112 -110173184 + B3A SINE B2 1 110 -88 7 1015 2995 47 21 0 chrX 56477497 56477880 -110172416 + MTA_Mm LTR MaLR 6 396 0 7 1015 246 128 0 0 chrX 56478244 56478283 -110172013 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1015 305 226 50 0 chrX 56480731 56480798 -110169498 - MTEa LTR MaLR -253 126 57 7 1015 459 0 0 0 chrX 56481904 56481955 -110168341 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 1015 594 283 84 20 chrX 56482288 56482490 -110167806 - Lx8 LINE L1 -443 7030 6816 7 1015 1214 296 63 12 chrX 56482491 56482901 -110167395 + Lx8 LINE L1 7041 7471 -2 7 1015 671 301 97 51 chrX 56484042 56484392 -110165904 + Lx8 LINE L1 6923 7288 -185 7 1015 459 0 0 0 chrX 56484509 56484560 -110165736 + (TA)n Simple_repeat Simple_repeat 2 52 0 7 1015 286 258 0 0 chrX 56486170 56486236 -110164060 - RMER30 DNA MER1_type 0 202 137 7 1015 695 105 8 0 chrX 56486966 56487090 -110163206 + (TA)n Simple_repeat Simple_repeat 1 125 0 7 1015 2019 213 27 7 chrX 56487382 56487789 -110162507 + MTD LTR MaLR 5 419 0 7 1015 21 36 0 0 chrX 56488212 56488240 -110162056 + AT_rich Low_complexity Low_complexity 1 28 0 7 1015 297 0 0 0 chrX 56488414 56488447 -110161849 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 7 1015 180 0 0 0 chrX 56489190 56489210 -110161086 + (CA)n Simple_repeat Simple_repeat 2 21 0 7 1015 294 119 0 0 chrX 56490567 56490609 -110159687 + B3 SINE B2 1 42 -174 7 1015 438 343 63 14 chrX 56490629 56490836 -110159460 + RMER15 LTR ERVL 248 464 -111 7 1015 183 156 0 0 chrX 56490841 56490873 -110159423 + GA-rich Low_complexity Low_complexity 3 34 0 7 1015 485 259 0 0 chrX 56490878 56490990 -110159306 + B3 SINE B2 104 215 -1 7 1015 230 193 18 0 chrX 56491696 56491753 -110158543 + GA-rich Low_complexity Low_complexity 2 59 0 7 126 549 296 39 61 chrX 56491788 56492171 -110158125 - L1MA8 LINE L1 -256 6035 5650 7 1016 797 268 40 6 chrX 56492189 56492585 -110157711 + L1M2 LINE L1 5120 5528 -763 7 1016 484 223 56 21 chrX 56493494 56493636 -110156660 + L1M2 LINE L1 5545 5691 -609 7 1016 252 245 103 31 chrX 56494000 56494097 -110156199 + L2a LINE L2 3313 3416 -10 7 1016 221 207 62 0 chrX 56494216 56494279 -110156017 - MIR SINE MIR -2 260 194 7 1016 441 0 0 0 chrX 56495715 56495764 -110154532 + (TA)n Simple_repeat Simple_repeat 2 50 0 7 1016 189 408 63 18 chrX 56495878 56496100 -110154196 + MIRb SINE MIR 16 247 -21 7 1016 258 340 24 91 chrX 56497472 56497637 -110152659 - MER5B DNA MER1_type -23 155 2 7 1016 433 306 33 66 chrX 56497691 56497873 -110152423 - Charlie10a DNA MER1_type -99 181 6 7 1016 288 0 0 0 chrX 56502351 56502383 -110147913 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1016 606 51 0 0 chrX 56503858 56503936 -110146360 + (GA)n Simple_repeat Simple_repeat 1 78 0 2 1016 198 71 0 0 chrX 56505111 56505139 -110145157 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 3 1016 191 211 26 0 chrX 56509115 56509153 -110141143 + L2c LINE L2 3291 3329 -58 4 1016 1534 229 18 42 chrX 56509159 56509542 -110140754 - ORR1D1 LTR MaLR 0 374 1 5 1016 316 343 15 24 chrX 56509749 56509891 -110140405 + MIR3 SINE MIR 25 163 -99 6 1016 8270 39 3 0 chrX 56509891 56510884 -110139412 + L1Md_T LINE L1 5587 6582 0 7 1016 297 272 115 101 chrX 56510987 56511126 -110139170 - MER20 DNA MER1_type -78 141 1 8 1016 634 169 177 0 chrX 56511756 56511880 -110138416 - URR1A DNA MER1_type -80 146 1 9 1016 181 311 182 32 chrX 56511992 56512118 -110138178 - MER5A DNA MER1_type -18 171 27 1 1016 527 295 12 49 chrX 56512234 56512398 -110137898 + MER5B DNA MER1_type 15 172 -6 1 1016 287 124 30 30 chrX 56513357 56513457 -110136839 + A-rich Low_complexity Low_complexity 5 104 0 1 1016 33284 80 10 5 chrX 56513518 56519640 -110130656 - L1Md_F2 LINE L1 -2 6580 449 1 1016 3289 213 60 93 chrX 56521705 56522720 -110127576 - Lx7 LINE L1 0 7696 6715 1 1016 301 189 19 87 chrX 56522719 56522823 -110127473 + Lx6 LINE L1 7341 7437 -23 1 1016 212 147 0 0 chrX 56523409 56523443 -110126853 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1016 871 314 31 65 chrX 56523487 56523838 -110126458 + MTE2a LTR MaLR 24 362 -17 1 1016 334 242 65 11 chrX 56524289 56524381 -110125915 + MLT1E2 LTR MaLR 531 627 0 1 1016 473 318 29 30 chrX 56524496 56524675 -110125621 - B3 SINE B2 -19 197 19 1 1016 184 360 62 31 chrX 56524784 56524913 -110125383 - L2a LINE L2 -272 3154 3022 2 1016 631 189 106 35 chrX 56525017 56525163 -110125133 - B1_Mur2 SINE Alu 0 149 1 2 1016 383 230 39 39 chrX 56525164 56525268 -110125028 - MER2 DNA MER2_type -148 197 94 2 1016 228 294 122 47 chrX 56525278 56525385 -110124911 - PB1D9 SINE Alu -5 115 1 2 1016 406 285 30 23 chrX 56525419 56525552 -110124744 - B1F SINE Alu -15 134 1 2 1016 183 129 0 0 chrX 56525589 56525620 -110124676 + (TATATG)n Simple_repeat Simple_repeat 4 34 0 2 1016 676 340 79 18 chrX 56527574 56527904 -110122392 + MLT2B4 LTR ERVL 9 358 -198 2 1016 1512 172 97 0 chrX 56528000 56528360 -110121936 + MYSERV16_I-int LTR ERVK 1462 1856 -470 2 1016 595 204 26 45 chrX 56528412 56528566 -110121730 + RLTR17 LTR ERVK 468 618 -74 2 1016 306 356 119 28 chrX 56528632 56528883 -110121413 + MLT1E1A LTR MaLR 298 571 -109 2 1016 349 278 37 43 chrX 56528979 56529167 -110121129 - L1M3 LINE L1 -550 5639 5453 3 1016 209 98 24 0 chrX 56529173 56529214 -110121082 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 3 1016 27 0 0 0 chrX 56529491 56529518 -110120778 + AT_rich Low_complexity Low_complexity 1 27 0 3 1016 591 62 0 0 chrX 56531135 56531215 -110119081 - L1_Mus2 LINE L1 -74 6492 6413 3 1016 361 91 0 0 chrX 56531217 56531283 -110119013 + L1_Mus2 LINE L1 6500 6565 -1 3 1016 23 0 0 0 chrX 56531571 56531594 -110118702 + AT_rich Low_complexity Low_complexity 1 23 0 3 1016 198 329 0 67 chrX 56531924 56531999 -110118297 - L2a LINE L2 -18 3408 3339 3 1016 376 326 50 6 chrX 56533862 56534022 -110116274 + MIRc SINE MIR 13 182 -86 3 1016 286 308 68 14 chrX 56534992 56535140 -110115156 - LTR16A1 LTR ERVL -87 369 214 3 1016 241 332 128 80 chrX 56535447 56535784 -110114512 + L2a LINE L2 3072 3424 -2 3 1016 233 312 0 25 chrX 56536524 56536603 -110113693 - B4A SINE B4 0 292 216 3 1016 437 377 7 0 chrX 56536643 56536789 -110113507 - B3A SINE B2 -51 147 1 4 1016 36880 7 0 1 chrX 56537042 56543039 -110107257 + L1Md_A LINE L1 1 5586 -297 4 1016 8880 6 8 0 chrX 56543039 56544027 -110106269 + L1Md_A LINE L1 5587 6582 0 4 1016 189 0 0 0 chrX 56544037 56544058 -110106238 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1016 5308 34 11 2 chrX 56544892 56545519 -110104777 + L1Md_F2 LINE L1 5936 6568 -14 4 1016 202 352 5 12 chrX 56547197 56547283 -110103013 - L2a LINE L2 -9 3417 3277 4 1016 360 218 0 0 chrX 56548013 56548091 -110102205 - Lx9 LINE L1 -499 7145 7068 4 1016 345 303 76 21 chrX 56548097 56548242 -110102054 - MLT1A LTR MaLR -221 153 1 4 1016 7805 34 0 0 chrX 56548315 56549282 -110101014 - L1Md_T LINE L1 -1 6581 5615 4 1016 226 358 10 59 chrX 56549328 56549429 -110100867 + MIR SINE MIR 12 107 -155 4 1016 288 308 19 70 chrX 56550431 56550588 -110099708 - MIRc SINE MIR -90 178 30 4 1016 825 207 84 40 chrX 56551020 56551246 -110099050 + Lx6 LINE L1 7193 7428 -32 5 1016 391 274 112 8 chrX 56551647 56551772 -110098524 + B1_Mur2 SINE Alu 5 142 -7 5 1016 203 88 29 0 chrX 56551912 56551946 -110098350 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1016 755 21 11 0 chrX 56552226 56552319 -110097977 + (GAAA)n Simple_repeat Simple_repeat 2 95 0 5 1016 672 232 0 28 chrX 56553513 56553655 -110096641 - B1_Mur4 SINE Alu -11 139 2 5 1016 415 188 0 77 chrX 56554004 56554160 -110096136 + (TG)n Simple_repeat Simple_repeat 2 145 0 5 1016 27 29 0 0 chrX 56554245 56554279 -110096017 + AT_rich Low_complexity Low_complexity 1 34 0 5 1016 838 270 7 36 chrX 56554455 56554735 -110095561 - Lx3C LINE L1 -96 6904 6633 5 1016 3303 145 17 70 chrX 56554735 56555381 -110094915 - L1_Mus3 LINE L1 -4 6634 6023 5 1016 1302 267 86 5 chrX 56556280 56556701 -110093595 + Lx9 LINE L1 7187 7641 -3 5 1016 2580 212 30 8 chrX 56556747 56557275 -110093021 + Lx5 LINE L1 6510 7049 -1 6 1016 361 348 14 0 chrX 56557399 56557537 -110092759 + B1F2 SINE Alu 9 148 -1 6 1016 21 0 0 0 chrX 56557835 56557856 -110092440 + AT_rich Low_complexity Low_complexity 1 21 0 6 1016 304 325 101 72 chrX 56557992 56558337 -110091959 + ORR1D1 LTR MaLR 18 372 -2 6 1016 2362 157 24 5 chrX 56558354 56558764 -110091532 + MTC LTR MaLR 2 419 -2 6 1016 202 217 0 0 chrX 56558817 56558863 -110091433 + A-rich Low_complexity Low_complexity 2 47 0 6 1016 3661 52 7 2 chrX 56559475 56559935 -110090361 + L1_Mus1 LINE L1 6106 6567 0 6 1016 863 247 118 29 chrX 56560164 56560410 -110089886 + MTC LTR MaLR 1 268 -153 6 1016 2008 266 90 22 chrX 56560526 56560870 -110089426 + L1MA7 LINE L1 5407 5752 -539 6 1016 333 0 0 0 chrX 56560870 56560907 -110089389 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 6 1016 2008 266 90 22 chrX 56560907 56561388 -110088908 + L1MA7 LINE L1 5753 6288 -3 6 1016 219 323 0 30 chrX 56562790 56562857 -110087439 + L2c LINE L2 3285 3349 -38 7 1016 387 0 0 0 chrX 56563873 56563916 -110086380 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 7 1016 1624 218 39 36 chrX 56564685 56565047 -110085249 + ORR1D2 LTR MaLR 3 365 -5 7 1016 243 352 44 75 chrX 56565086 56565381 -110084915 + L2 LINE L2 2526 2811 -608 7 1016 252 276 20 32 chrX 56566370 56566548 -110083748 + L1M4c LINE L1 1934 2228 -4874 7 1016 229 174 65 0 chrX 56567261 56567307 -110082989 - B4 SINE B4 -74 218 170 7 1016 225 278 18 18 chrX 56567281 56567336 -110082960 - B1F SINE Alu -94 55 1 7 1016 350 136 0 29 chrX 56567385 56567453 -110082843 + (CGTG)n Simple_repeat Simple_repeat 2 67 0 7 1016 251 373 9 0 chrX 56569163 56569273 -110081023 - PB1D10 SINE Alu -6 111 1 7 1016 865 171 0 14 chrX 56569948 56570096 -110080200 - B1_Mus1 SINE Alu -1 147 2 7 1016 471 35 0 0 chrX 56570372 56570429 -110079867 + (TC)n Simple_repeat Simple_repeat 2 58 0 8 1016 277 289 121 65 chrX 56571144 56571359 -110078937 - L2a LINE L2 -3 3423 3197 8 1016 426 20 0 0 chrX 56571422 56571473 -110078823 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1016 185 111 0 0 chrX 56571942 56571969 -110078327 - L2a LINE L2 -240 3135 3109 8 1016 252 86 0 0 chrX 56573212 56573247 -110077049 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 8 1016 247 283 36 100 chrX 56573749 56573859 -110076437 - MIRc SINE MIR -55 213 111 8 1016 429 341 109 84 chrX 56575205 56575480 -110074816 + B4A SINE B4 10 291 -1 8 1016 300 53 0 0 chrX 56575533 56575571 -110074725 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 8 1016 1004 175 35 25 chrX 56578905 56579104 -110071192 - ORR1D1 LTR MaLR 0 374 174 8 1016 343 228 66 73 chrX 56579388 56579525 -110070771 + LTR79 LTR ERVL 371 506 -21 8 1016 3157 58 0 2 chrX 56580166 56580563 -110069733 - L1_Mus2 LINE L1 0 6566 6171 8 1016 1415 57 0 11 chrX 56580563 56580740 -110069556 + L1_Mus2 LINE L1 6052 6226 -340 8 1016 422 338 90 79 chrX 56581510 56581876 -110068420 + MLT1A LTR MaLR 1 370 -4 9 1016 2636 86 0 5 chrX 56581949 56582203 -110068093 - L1VL4 LINE L1 -2408 1207 967 9 1016 3892 135 9 32 chrX 56582203 56582861 -110067435 - Lx2B LINE L1 -5 6995 6353 9 1016 2636 140 3 106 chrX 56582861 56582914 -110067382 - L1VL4 LINE L1 -5368 967 960 9 1016 2206 114 12 0 chrX 56582914 56583238 -110067058 - Lx3_Mus LINE L1 -1 7008 6681 9 1016 3372 82 0 0 chrX 56583238 56583702 -110066594 - L1VL4 LINE L1 -5376 959 497 9 1016 1225 90 90 0 chrX 56583696 56583884 -110066412 - L1VL2 LINE L1 -5495 840 636 9 1016 555 16 0 0 chrX 56584300 56584364 -110065932 + (TC)n Simple_repeat Simple_repeat 2 65 0 9 1016 360 0 0 0 chrX 56584364 56584403 -110065893 + (TG)n Simple_repeat Simple_repeat 1 40 0 9 1016 23 68 0 0 chrX 56584658 56584702 -110065594 + AT_rich Low_complexity Low_complexity 1 44 0 9 1016 24 0 0 0 chrX 56584906 56584930 -110065366 + AT_rich Low_complexity Low_complexity 1 24 0 9 1016 246 320 39 16 chrX 56585252 56585379 -110064917 + L1MD1 LINE L1 6100 6229 -13 9 1016 23 33 0 0 chrX 56585477 56585507 -110064789 + AT_rich Low_complexity Low_complexity 1 30 0 1 1016 238 303 33 11 chrX 56585574 56585664 -110064632 + Lx8 LINE L1 7051 7142 -331 1 1016 250 67 44 0 chrX 56586635 56586680 -110063616 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 1016 665 193 188 28 chrX 56587020 56587201 -110063095 - MTD LTR MaLR -14 405 196 1 1016 2473 116 22 8 chrX 56587219 56587619 -110062677 - Lx LINE L1 -1 6653 6248 1 1016 4698 96 14 19 chrX 56587620 56588415 -110061881 + Lx LINE L1 5460 6240 -414 1 1016 497 250 68 17 chrX 56588415 56588533 -110061763 - MTD LTR MaLR -208 211 88 1 1016 480 18 0 0 chrX 56588702 56588759 -110061537 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 1 1016 369 0 0 0 chrX 56588936 56588977 -110061319 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1016 23 33 0 0 chrX 56589036 56589066 -110061230 + AT_rich Low_complexity Low_complexity 1 30 0 1 1016 342 0 0 0 chrX 56589068 56589106 -110061190 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1016 270 0 0 0 chrX 56589136 56589166 -110061130 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 1016 351 0 0 0 chrX 56589166 56589204 -110061092 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 1016 3474 73 34 57 chrX 56589483 56589991 -110060305 - L1_Mus2 LINE L1 0 6566 6071 1 1016 397 97 14 14 chrX 56590071 56590144 -110060152 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 1016 488 30 0 15 chrX 56590147 56590215 -110060081 - Lx2A LINE L1 -5 7003 6937 1 1016 508 307 0 60 chrX 56590461 56590610 -110059686 - RSINE1 SINE B4 -1 164 25 1 1016 354 362 81 72 chrX 56591180 56591415 -110058881 + L2c LINE L2 2976 3212 -175 1 1016 555 323 50 71 chrX 56591564 56591844 -110058452 - MLT1K LTR MaLR 0 595 322 1 1016 1282 228 57 0 chrX 56593985 56594266 -110056030 - MTD LTR MaLR -11 408 112 1 1016 422 229 9 35 chrX 56594300 56594359 -110055937 - MTD LTR MaLR -290 131 75 1 1016 2496 62 0 6 chrX 56594359 56594686 -110055610 - L1Md_F2 LINE L1 0 6582 6258 1 1016 422 229 9 35 chrX 56594686 56594739 -110055557 - MTD LTR MaLR -347 74 22 1 1016 227 31 0 30 chrX 56594739 56594772 -110055524 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 1016 389 292 100 72 chrX 56594784 56595035 -110055261 + B4 SINE B4 35 292 0 1 1016 980 280 28 99 chrX 56595166 56595519 -110054777 - MTE2a LTR MaLR 0 379 52 1 1016 408 103 37 18 chrX 56596257 56596366 -110053930 + (TA)n Simple_repeat Simple_repeat 1 111 0 1 1016 374 315 35 14 chrX 56596453 56596598 -110053698 - B1F2 SINE Alu 0 149 2 1 1016 340 287 49 19 chrX 56598676 56598811 -110051485 + B4A SINE B4 2 140 -25 1 1016 369 0 0 0 chrX 56598811 56598852 -110051444 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1016 224 336 64 45 chrX 56598852 56598872 -110051424 + RSINE1 SINE B4 141 160 -5 1 1016 424 371 23 0 chrX 56598897 56599029 -110051267 + RSINE1 SINE B4 18 152 -13 1 1016 501 32 0 0 chrX 56600445 56600508 -110049788 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 1016 3310 135 17 4 chrX 56600680 56601207 -110049089 + Lx4A LINE L1 6525 7058 0 1 1016 977 193 52 0 chrX 56601336 56601528 -110048768 - URR1A DNA MER1_type 0 226 25 1 1016 1124 246 233 7 chrX 56602061 56602484 -110047812 + L1Md_F3 LINE L1 5232 5748 -836 1 1016 380 271 211 8 chrX 56603774 56603897 -110046399 - B1_Mur1 SINE Alu -1 148 1 1 1016 200 329 214 0 chrX 56604128 56604268 -110046028 + MIR SINE MIR 92 261 -1 1 1016 403 257 0 99 chrX 56604847 56604968 -110045328 - PB1D9 SINE Alu 0 120 12 1 1016 220 313 0 29 chrX 56605153 56605222 -110045074 + L2a LINE L2 3356 3422 -4 1 1016 308 340 9 19 chrX 56605356 56605461 -110044835 - PB1D10 SINE Alu -2 115 12 1 1016 2124 117 63 3 chrX 56605765 56606116 -110044180 + Lx LINE L1 6274 6645 -9 1 1016 4919 154 18 47 chrX 56606147 56607112 -110043184 - L1_Mur2 LINE L1 -1695 4182 3246 1 1016 351 0 0 0 chrX 56607338 56607377 -110042919 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1016 1737 10 0 0 chrX 56608077 56608270 -110042026 + B2_Mm1a SINE B2 1 193 0 1 1016 1085 103 0 0 chrX 56608289 56608435 -110041861 + B1_Mm SINE Alu 2 147 0 1 1016 784 81 57 8 chrX 56608593 56608717 -110041579 - L1_Mus1 LINE L1 -1 6566 6437 1 1016 851 96 0 35 chrX 56608714 56608855 -110041441 + L1Md_F2 LINE L1 6431 6566 -16 1 1016 363 44 0 0 chrX 56608855 56608900 -110041396 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1016 2380 65 0 0 chrX 56608901 56609192 -110041104 - L1_Mus1 LINE L1 -143 6424 6134 1 1016 2304 76 0 0 chrX 56609188 56609492 -110040804 + L1_Mus1 LINE L1 5832 6135 -431 1 1016 7344 128 30 1 chrX 56609593 56611023 -110039273 + Lx3C LINE L1 4700 6170 -806 1 1016 1194 117 18 0 chrX 56611853 56612024 -110038272 + B2_Mm2 SINE B2 3 176 -19 1 1016 369 0 0 0 chrX 56612025 56612066 -110038230 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 1 1016 395 78 0 15 chrX 56612294 56612359 -110037937 + (CATA)n Simple_repeat Simple_repeat 4 67 0 1 1016 279 324 68 31 chrX 56612405 56612596 -110037700 + Charlie19a DNA Charlie 129 326 -60 1 1016 351 246 92 28 chrX 56612691 56612833 -110037463 + Charlie26a DNA MER1_type 49 199 -126 1 1016 271 297 9 129 chrX 56612835 56612951 -110037345 - B4 SINE B4 -5 287 186 1 1016 314 314 225 7 chrX 56613022 56613160 -110037136 - B4A SINE B4 -124 168 1 1 1016 325 384 66 47 chrX 56614233 56614446 -110035850 + MIRb SINE MIR 34 250 -18 1 1016 313 331 86 0 chrX 56614733 56614884 -110035412 + MIRc SINE MIR 105 268 0 1 1016 292 318 89 22 chrX 56615513 56615648 -110034648 + MIRc SINE MIR 18 161 -107 1 1016 833 311 69 30 chrX 56615923 56616284 -110034012 + MLT1B LTR MaLR 13 387 -3 1 1016 30 0 0 0 chrX 56616606 56616636 -110033660 + AT_rich Low_complexity Low_complexity 1 30 0 1 1016 744 118 15 0 chrX 56617501 56617637 -110032659 - Lx LINE L1 -3 6651 6514 1 1016 822 93 0 0 chrX 56617637 56617755 -110032541 + Lx LINE L1 6259 6376 -278 1 1016 238 289 124 0 chrX 56618425 56618522 -110031774 + PB1D10 SINE Alu 4 112 -5 1 1016 231 88 0 0 chrX 56619150 56619184 -110031112 + (GGGAA)n Simple_repeat Simple_repeat 2 35 0 1 1016 1071 106 0 0 chrX 56619184 56619389 -110030907 + L1_Mus1 LINE L1 6402 6567 0 1 1016 243 125 0 0 chrX 56619687 56619727 -110030569 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 1016 428 324 97 35 chrX 56619796 56620218 -110030078 + L1ME3 LINE L1 5409 5856 -306 1 1016 238 369 57 8 chrX 56620617 56620740 -110029556 + MIR3 SINE MIR 32 160 -48 1 1016 277 188 0 0 chrX 56621005 56621053 -110029243 + Charlie4z DNA MER1_type 87 134 -33 1 1016 8430 4 0 0 chrX 56621816 56622749 -110027547 - L1Md_T LINE L1 0 6582 5650 1 1017 4540 54 2 2 chrX 56623460 56624032 -110026264 + L1Md_F2 LINE L1 5014 5585 -298 1 1017 8216 38 3 0 chrX 56624033 56625024 -110025272 + L1Md_F2 LINE L1 5587 6580 -2 1 1017 2495 86 0 3 chrX 56625481 56625831 -110024465 - L1_Mus4 LINE L1 -6 6630 6282 1 1017 202 344 11 21 chrX 56627046 56627141 -110023155 - L2c LINE L2 -269 3118 3025 1 1017 489 264 21 21 chrX 56627154 56627297 -110022999 + L2a LINE L2 3276 3418 -8 1 1017 314 175 0 12 chrX 56628220 56628252 -110022044 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1017 558 0 0 0 chrX 56628252 56628314 -110021982 + (TC)n Simple_repeat Simple_repeat 1 62 0 1 1017 314 175 0 12 chrX 56628314 56628362 -110021934 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1017 389 269 29 9 chrX 56628510 56628615 -110021681 + L2a LINE L2 3311 3417 -9 1 1017 186 369 60 0 chrX 56628671 56628755 -110021541 - MIR SINE MIR -173 89 1 1 1017 280 327 56 0 chrX 56630360 56630467 -110019829 - B1_Mur3 SINE Alu -4 145 33 1 1017 453 264 31 8 chrX 56631005 56631135 -110019161 + B1F SINE Alu 3 135 -14 1 1017 771 42 0 0 chrX 56631144 56631239 -110019057 + (GGA)n Simple_repeat Simple_repeat 3 97 0 1 1017 212 380 0 12 chrX 56631641 56631721 -110018575 - BC1_Mm scRNA scRNA -72 80 2 1 1017 285 331 0 16 chrX 56632686 56632809 -110017487 + GA-rich Low_complexity Low_complexity 1 121 0 1 1017 451 248 0 0 chrX 56633110 56633231 -110017065 + Lx6 LINE L1 7336 7456 -4 1 1017 270 0 0 0 chrX 56633339 56633369 -110016927 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 1017 298 385 6 17 chrX 56634546 56634718 -110015578 + Charlie2a DNA MER1_type 1493 1662 -1199 1 1017 259 239 76 38 chrX 56635702 56635834 -110014462 + L1MB1 LINE L1 5762 5898 -273 1 1017 496 276 91 112 chrX 56635835 56636057 -110014239 + MTE2a LTR MaLR 1 198 -181 1 1017 576 0 0 0 chrX 56636057 56636121 -110014175 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 1017 496 276 91 112 chrX 56636121 56636282 -110014014 + MTE2a LTR MaLR 199 375 -4 1 1017 227 239 15 0 chrX 56636473 56636540 -110013756 + L1MB1 LINE L1 6097 6164 -4 1 1017 322 256 0 24 chrX 56637211 56637295 -110013001 - MTC LTR MaLR -26 395 314 1 1017 251 340 47 26 chrX 56639031 56639224 -110011072 + L2 LINE L2 2148 2344 -1075 1 1017 464 242 168 36 chrX 56640062 56640229 -110010067 - B3A SINE B2 -5 193 5 1 1017 261 284 71 39 chrX 56640738 56640892 -110009404 + L1M5 LINE L1 5732 5890 -234 1 1017 21 0 0 0 chrX 56640924 56640945 -110009351 + AT_rich Low_complexity Low_complexity 1 21 0 1 1017 958 269 15 23 chrX 56641400 56641659 -110008637 + Lx8 LINE L1 7079 7335 -138 1 1017 25 0 0 0 chrX 56641661 56641686 -110008610 + AT_rich Low_complexity Low_complexity 1 25 0 1 1017 260 321 73 15 chrX 56642226 56642362 -110007934 + Lx8 LINE L1 7141 7284 -189 1 1017 346 267 132 37 chrX 56642621 56642757 -110007539 + B3A SINE B2 68 216 0 1 1017 820 115 14 7 chrX 56643179 56643319 -110006977 + (GGAA)n Simple_repeat Simple_repeat 1 141 0 1 1017 322 262 97 61 chrX 56643491 56643605 -110006691 + PB1 SINE Alu 3 120 -7 1 1017 24 32 0 0 chrX 56643922 56643953 -110006343 + AT_rich Low_complexity Low_complexity 1 31 0 1 1017 801 246 51 5 chrX 56644131 56644327 -110005969 + B3 SINE B2 1 205 -11 1 1017 398 313 80 58 chrX 56644388 56644612 -110005684 + MTC LTR MaLR 6 234 -187 1 1017 27 29 0 0 chrX 56644840 56644874 -110005422 + AT_rich Low_complexity Low_complexity 1 34 0 1 1017 1328 75 11 0 chrX 56645166 56645340 -110004956 + L1_Mus1 LINE L1 6122 6297 -270 2 1017 181 349 61 0 chrX 56645419 56645485 -110004811 - MIR3 SINE MIR -52 156 87 2 1017 2399 104 3 0 chrX 56646156 56646482 -110003814 + ORR1A2 LTR MaLR 1 327 0 2 1017 458 145 0 0 chrX 56647503 56647579 -110002717 + Lx7 LINE L1 7617 7692 -4 2 1017 291 250 62 31 chrX 56647738 56647866 -110002430 - L1MB8 LINE L1 -16 6162 6031 2 1017 2861 151 37 18 chrX 56647883 56648396 -110001900 + Lx2B LINE L1 6475 6997 -3 2 1017 595 259 43 0 chrX 56649427 56649566 -110000730 + B4 SINE B4 83 227 -65 2 1017 592 273 67 31 chrX 56649649 56649872 -110000424 + L1MA6 LINE L1 5999 6229 -71 2 1017 210 193 0 0 chrX 56649879 56649936 -110000360 + (CAGAGA)n Simple_repeat Simple_repeat 2 58 0 2 1017 1212 192 9 0 chrX 56650012 56650236 -110000060 + URR1A DNA MER1_type 1 226 0 2 1017 25 75 0 0 chrX 56650365 56650418 -109999878 + AT_rich Low_complexity Low_complexity 1 53 0 2 1017 592 296 15 5 chrX 56650584 56650781 -109999515 + L1M5 LINE L1 2513 2711 -3435 2 1017 963 112 19 0 chrX 56651685 56651845 -109998451 - L1_Mus3 LINE L1 -2 6636 6474 2 1017 857 140 17 0 chrX 56651845 56651983 -109998313 + L1_Mus3 LINE L1 6351 6465 -173 2 1017 585 355 41 38 chrX 56651996 56652289 -109998007 - MER58B DNA MER1_type -47 294 1 2 1017 3130 56 5 5 chrX 56652461 56652857 -109997439 + MTA_Mm LTR MaLR 1 396 0 2 1017 256 348 17 9 chrX 56653390 56653506 -109996790 + L2 LINE L2 431 547 -2872 2 1017 1400 190 24 75 chrX 56653981 56654316 -109995980 - Lx9 LINE L1 -471 7173 6856 2 1017 957 179 85 8 chrX 56654320 56654568 -109995728 + Lx9 LINE L1 7377 7643 -1 2 1017 21 57 0 0 chrX 56657420 56657455 -109992841 + AT_rich Low_complexity Low_complexity 1 35 0 2 1017 543 229 86 0 chrX 56657455 56657595 -109992701 - B3 SINE B2 0 216 65 2 1017 250 230 9 17 chrX 56657603 56657673 -109992623 + PB1D7 SINE Alu 66 149 0 2 1017 202 115 19 19 chrX 56658087 56658140 -109992156 + T-rich Low_complexity Low_complexity 2 54 0 2 1017 319 369 93 6 chrX 56658262 56658423 -109991873 - MLT1H1 LTR MaLR -311 244 70 2 1017 257 318 35 56 chrX 56658935 56659083 -109991213 - MIRc SINE MIR -30 232 89 2 1017 775 168 0 18 chrX 56659330 56659494 -109990802 + CT-rich Low_complexity Low_complexity 1 161 0 2 1017 632 140 258 13 chrX 56659494 56659653 -109990643 - Lx3C LINE L1 -2 6974 6777 2 1017 464 0 18 0 chrX 56659656 56659712 -109990584 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 2 1017 410 233 23 15 chrX 56659712 56659843 -109990453 + (ATGGTG)n Simple_repeat Simple_repeat 5 136 0 2 1017 653 167 9 0 chrX 56659861 56659969 -109990327 - Lx3C LINE L1 -213 6763 6655 2 1017 5279 144 64 9 chrX 56659999 56660884 -109989412 + Lx4A LINE L1 6125 7058 0 2 1017 270 299 55 27 chrX 56661132 56661242 -109989054 + Charlie4z DNA MER1_type 48 160 -7 2 1017 345 136 0 0 chrX 56661362 56661421 -109988875 - L1_Mus1 LINE L1 -54 6513 6455 2 1017 362 20 0 0 chrX 56661421 56661470 -109988826 + L1_Mus2 LINE L1 6518 6566 0 2 1017 327 146 0 0 chrX 56661500 56661555 -109988741 + (A)n Simple_repeat Simple_repeat 1 55 0 2 1017 939 249 3 100 chrX 56661564 56661894 -109988402 + L1VL1 LINE L1 207 504 -5918 2 1017 1001 217 116 22 chrX 56661889 56662200 -109988096 + L1Md_F LINE L1 439 778 -5741 2 1017 7601 61 0 0 chrX 56662202 56663149 -109987147 + L1_Mus2 LINE L1 5619 6565 -1 2 1017 250 273 23 125 chrX 56663395 56663451 -109986845 - Charlie15a DNA MER1_type -145 79 32 2 1017 3294 33 10 0 chrX 56663451 56663843 -109986453 + MTA_Mm LTR MaLR 1 396 0 2 1017 250 273 23 125 chrX 56663843 56663874 -109986422 - Charlie15a DNA MER1_type -193 31 1 2 1017 221 311 105 83 chrX 56665443 56665576 -109984720 - L2b LINE L2 -9 3366 3231 2 1017 699 75 0 0 chrX 56666413 56666507 -109983789 + (TA)n Simple_repeat Simple_repeat 1 94 0 2 1017 600 340 17 25 chrX 56666969 56667207 -109983089 - MLT1D LTR MaLR -8 497 262 2 1017 249 365 69 6 chrX 56667253 56667413 -109982883 - MLT1D LTR MaLR -452 175 6 2 1017 315 353 54 60 chrX 56667433 56667473 -109982823 + LTR33 LTR ERVL 1 39 -476 2 1017 2809 47 0 0 chrX 56667473 56667815 -109982481 - L1Md_F3 LINE L1 -1 6583 6242 2 1017 315 353 54 60 chrX 56667815 56667937 -109982359 + LTR33 LTR ERVL 40 166 -349 2 1017 609 14 0 0 chrX 56667937 56668007 -109982289 + (GGAA)n Simple_repeat Simple_repeat 4 73 0 2 1017 315 353 54 60 chrX 56668007 56668027 -109982269 + LTR33 LTR ERVL 167 183 -332 2 1017 1346 251 82 46 chrX 56668185 56668573 -109981723 - MTD LTR MaLR 0 419 18 2 1017 251 305 11 58 chrX 56668931 56669018 -109981278 + PB1D10 SINE Alu 1 83 -34 2 1017 831 272 48 117 chrX 56669007 56669340 -109980956 + ORR1D2 LTR MaLR 30 339 -31 2 1017 820 236 48 29 chrX 56669418 56669627 -109980669 + B3 SINE B2 1 213 -3 2 1017 299 333 13 0 chrX 56669655 56669733 -109980563 + ID4_ SINE ID 5 83 0 2 1017 1414 80 56 82 chrX 56669758 56669990 -109980306 + L1_Mus2 LINE L1 6341 6566 0 2 1017 325 311 45 39 chrX 56670349 56670503 -109979793 - MIRb SINE MIR -59 209 55 2 1017 286 391 29 21 chrX 56670529 56670767 -109979529 - MIRb SINE MIR -3 265 26 2 1017 180 287 91 11 chrX 56670915 56671003 -109979293 + L3 LINE CR1 2793 2887 -1602 2 1017 242 289 32 95 chrX 56671006 56671128 -109979168 + B1F1 SINE Alu 1 113 -36 2 1017 194 263 25 50 chrX 56671162 56671242 -109979054 - MIRb SINE MIR -71 197 120 2 1017 746 230 78 20 chrX 56672399 56672603 -109977693 + B3 SINE B2 1 216 0 2 1017 649 322 29 15 chrX 56672619 56672824 -109977472 + B3 SINE B2 9 216 0 2 1017 661 254 0 47 chrX 56672828 56672977 -109977319 + B4 SINE B4 82 223 -69 2 1017 571 78 0 0 chrX 56673251 56673328 -109976968 - ORR1A2 LTR MaLR 0 327 251 2 1017 4381 176 64 34 chrX 56673327 56674263 -109976033 - ORR1A2-int LTR MaLR -828 964 1 2 1017 2146 128 0 0 chrX 56674267 56674586 -109975710 - ORR1A2 LTR MaLR -8 319 1 2 1017 311 325 46 34 chrX 56675635 56675810 -109974486 + L1MB5 LINE L1 5580 5756 -418 2 1017 2704 217 57 50 chrX 56675836 56676637 -109973659 + RMER1B Other Other 73 1063 -3 2 1017 561 320 34 31 chrX 56676638 56676964 -109973332 + L1MB5 LINE L1 5799 6125 -49 2 1017 196 278 18 18 chrX 56676981 56677036 -109973260 + MIRm SINE MIR 63 117 -145 2 1017 292 173 0 0 chrX 56677498 56677550 -109972746 - URR1B DNA MER1_type -6 219 168 2 1017 783 223 31 79 chrX 56677555 56677784 -109972512 + RMER13B LTR ERVK 5 222 -686 2 1017 237 338 0 29 chrX 56677808 56677878 -109972418 + RMER13A LTR ERVK 793 860 0 2 1017 858 183 27 59 chrX 56677886 56678072 -109972224 - URR1B DNA MER1_type -46 179 1 2 1017 26 82 0 0 chrX 56679526 56679587 -109970709 + AT_rich Low_complexity Low_complexity 1 61 0 2 1017 2170 166 17 10 chrX 56679608 56680021 -109970275 - L1_Mur2 LINE L1 -36 5841 5426 2 1017 7261 35 0 0 chrX 56680020 56680923 -109969373 - L1Md_T LINE L1 0 6582 5680 2 1017 2666 147 48 2 chrX 56680922 56681427 -109968869 - L1_Mur2 LINE L1 -451 5426 4899 2 1017 5121 211 30 13 chrX 56681433 56682584 -109967712 + Lx5 LINE L1 5878 7047 -3 2 1017 323 348 54 62 chrX 56682596 56682967 -109967329 - L1M5 LINE L1 -1982 4164 3797 2 1017 423 78 0 0 chrX 56684896 56684960 -109965336 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 1017 704 322 28 10 chrX 56685590 56685979 -109964317 + L1M2 LINE L1 4735 5130 -1013 2 1017 1401 154 139 65 chrX 56686040 56686379 -109963917 - ORR1B1 LTR MaLR 0 394 31 2 1017 3214 65 7 2 chrX 56686511 56686930 -109963366 + BGLII LTR ERVK 1 421 0 2 1017 825 95 33 39 chrX 56686998 56687151 -109963145 + RMER17B LTR ERVK 312 463 -495 2 1017 21 0 0 0 chrX 56687249 56687270 -109963026 + AT_rich Low_complexity Low_complexity 1 21 0 2 1017 647 269 48 0 chrX 56688052 56688238 -109962058 + B3A SINE B2 1 195 -3 2 1017 209 197 15 0 chrX 56688239 56688305 -109961991 + (TAGA)n Simple_repeat Simple_repeat 1 67 0 2 1017 329 306 70 12 chrX 56688904 56689076 -109961220 + L1MEe LINE L1 434 615 -4239 2 1017 366 240 82 50 chrX 56689102 56689219 -109961077 + L1MA5 LINE L1 4978 5091 -1052 2 1017 681 76 0 0 chrX 56689219 56689311 -109960985 + (TTCTC)n Simple_repeat Simple_repeat 4 95 0 2 1017 366 240 82 50 chrX 56689311 56689412 -109960884 + L1MA5 LINE L1 5092 5203 -940 2 1017 1059 188 53 24 chrX 56689580 56689787 -109960509 - B3 SINE B2 -3 213 1 2 1017 239 355 151 0 chrX 56689790 56689883 -109960413 - B1F SINE Alu -7 142 36 2 1017 415 268 20 20 chrX 56689884 56689983 -109960313 + PB1 SINE Alu 26 124 -3 2 1017 220 216 0 0 chrX 56690021 56690058 -109960238 - B2_Mm2 SINE B2 -158 37 1 2 1017 459 280 88 41 chrX 56693754 56694093 -109956203 + L1MA5 LINE L1 5899 6253 -47 2 1017 1183 62 0 0 chrX 56694177 56694323 -109955973 - B1_Mus1 SINE Alu -2 146 1 2 1017 228 317 195 51 chrX 56694476 56694653 -109955643 - MIRb SINE MIR -64 204 1 2 1017 267 297 14 0 chrX 56694778 56694852 -109955444 + GA-rich Low_complexity Low_complexity 5 79 0 2 1017 672 291 165 25 chrX 56696223 56696459 -109953837 - B4 SINE B4 -23 269 1 2 1017 593 306 53 37 chrX 56696694 56696854 -109953442 + B3A SINE B2 6 165 -33 2 1017 207 0 0 0 chrX 56696854 56696877 -109953419 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1017 593 306 53 37 chrX 56696877 56696903 -109953393 + B3A SINE B2 166 195 -3 2 1017 223 237 0 17 chrX 56697076 56697136 -109953160 + GA-rich Low_complexity Low_complexity 1 59 0 2 1017 385 286 234 46 chrX 56697497 56697908 -109952388 + L2 LINE L2 1160 1647 -1772 2 1017 180 305 19 109 chrX 56697940 56698150 -109952146 + L2 LINE L2 1793 1983 -1436 2 1017 6612 63 0 1 chrX 56698152 56699031 -109951265 + L1Md_F2 LINE L1 4709 5586 -297 2 1017 8103 48 1 5 chrX 56699031 56700077 -109950219 + L1Md_F2 LINE L1 5587 6582 0 2 1017 474 337 60 48 chrX 56700168 56700520 -109949776 + L2 LINE L2 2236 2591 -828 2 1017 217 250 35 35 chrX 56701097 56701184 -109949112 + A-rich Low_complexity Low_complexity 3 89 0 2 1017 292 325 46 11 chrX 56701196 56701283 -109949013 - B1_Mur2 SINE Alu -55 94 5 2 1017 342 318 84 28 chrX 56701492 56701670 -109948626 + L1MB5 LINE L1 5985 6172 -2 2 1017 23 0 0 0 chrX 56702021 56702044 -109948252 + AT_rich Low_complexity Low_complexity 1 23 0 2 1017 904 318 61 52 chrX 56703252 56703597 -109946699 + MLT1A0 LTR MaLR 8 355 -10 2 1017 231 36 0 0 chrX 56703636 56703664 -109946632 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1017 189 0 0 0 chrX 56703664 56703684 -109946612 + (GA)n Simple_repeat Simple_repeat 1 21 0 3 1017 216 241 0 0 chrX 56703695 56703753 -109946543 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 1017 2189 93 3 0 chrX 56704034 56704336 -109945960 - L1_Mus1 LINE L1 0 6567 6265 3 1017 1829 86 0 0 chrX 56704710 56704953 -109945343 - L1_Mus1 LINE L1 -1 6566 6324 3 1017 188 271 62 0 chrX 56705229 56705277 -109945019 - MIRb SINE MIR -181 87 37 3 1017 308 293 0 0 chrX 56705315 56705390 -109944906 + ID4 SINE ID 3 77 -6 3 1017 240 343 31 60 chrX 56705782 56705999 -109944297 - L2c LINE L2 -26 3349 3145 3 1017 212 31 0 59 chrX 56707075 56707109 -109943187 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 3 1017 1270 132 143 4 chrX 56707393 56707666 -109942630 + Lx5 LINE L1 1365 1675 -4202 3 1017 4759 50 0 0 chrX 56707667 56708281 -109942015 + L1Md_F2 LINE L1 4973 5586 -297 3 1017 7929 51 2 2 chrX 56708281 56709275 -109941021 + L1Md_F2 LINE L1 5587 6580 -2 3 1017 9050 160 62 75 chrX 56709276 56711034 -109939262 + Lx5 LINE L1 2979 4637 -1240 3 1017 218 56 28 0 chrX 56711034 56711070 -109939226 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 1017 9050 160 62 75 chrX 56711070 56711679 -109938617 + Lx5 LINE L1 4638 5315 -562 3 1017 1395 178 57 157 chrX 56711683 56712073 -109938223 - ORR1B1 LTR MaLR -8 386 1 3 1017 6385 133 4 65 chrX 56712073 56712251 -109938045 - ORR1B1-int LTR MaLR 0 1963 1796 3 1017 425 67 40 0 chrX 56712251 56712326 -109937970 - Lx3_Mus LINE L1 -5 7004 6927 3 1017 6385 137 6 63 chrX 56712326 56713324 -109936972 - ORR1B1-int LTR MaLR -168 1795 640 3 1017 36334 30 0 0 chrX 56713324 56719726 -109930570 - L1Md_T LINE L1 -1 6584 86 3 1017 3597 220 22 54 chrX 56719727 56720654 -109929642 - ORR1B1-int LTR MaLR -1066 897 1 3 1017 1504 188 52 87 chrX 56720654 56720671 -109929625 - ORR1B1 LTR MaLR 0 394 380 3 1017 200 59 29 0 chrX 56720671 56720705 -109929591 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1017 1504 188 52 87 chrX 56720705 56721054 -109929242 - ORR1B1 LTR MaLR -15 379 41 3 1017 7255 176 22 22 chrX 56721062 56722779 -109927517 + Lx5 LINE L1 5312 7037 -13 3 1017 207 0 0 0 chrX 56722779 56722802 -109927494 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 3 1017 224 300 72 9 chrX 56723526 56723637 -109926659 - MIRc SINE MIR -58 204 87 3 1017 495 323 66 44 chrX 56724867 56725039 -109925257 + L1M5 LINE L1 3589 3773 -2373 3 1017 2369 55 10 3 chrX 56725039 56725351 -109924945 + L1Md_F3 LINE L1 6257 6570 -14 3 1017 495 323 66 44 chrX 56725351 56725858 -109924438 + L1M5 LINE L1 3774 4282 -1864 3 1017 584 81 23 0 chrX 56726616 56726703 -109923593 + ORR1B2 LTR MaLR 1 89 -278 3 1017 364 119 17 0 chrX 56726690 56726744 -109923552 + ORR1B2 LTR MaLR 295 349 -18 3 1017 3461 207 71 4 chrX 56726744 56727544 -109922752 + ORR1B2-int LTR MaLR 1 854 -655 3 1017 2475 160 7 2 chrX 56727555 56727981 -109922315 + ORR1B2-int LTR MaLR 1082 1509 0 3 1017 1681 158 179 3 chrX 56727981 56728293 -109922003 + ORR1B2 LTR MaLR 1 367 0 3 1017 4277 69 29 8 chrX 56728391 56728977 -109921319 + L1_Mus4 LINE L1 6038 6635 -1 3 1017 452 121 20 0 chrX 56729234 56729333 -109920963 + (CAGA)n Simple_repeat Simple_repeat 2 102 0 3 1017 223 294 0 47 chrX 56729608 56729715 -109920581 + GA-rich Low_complexity Low_complexity 3 104 0 3 1017 743 263 51 51 chrX 56731470 56731666 -109918630 + B4A SINE B4 3 198 -94 3 1017 277 297 204 106 chrX 56731682 56731795 -109918501 + RSINE1 SINE B4 6 129 -36 3 1017 300 27 0 0 chrX 56731802 56731839 -109918457 + (TC)n Simple_repeat Simple_repeat 1 37 0 3 1017 333 0 0 0 chrX 56731839 56731875 -109918421 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1017 682 211 108 49 chrX 56731920 56732124 -109918172 + B3 SINE B2 1 216 0 3 1017 1032 156 24 0 chrX 56732503 56732670 -109917626 + MTC LTR MaLR 5 175 -246 3 1017 197 329 47 12 chrX 56732817 56732903 -109917393 - L2c LINE L2 -22 3365 3277 3 1017 190 345 115 0 chrX 56733748 56733835 -109916461 + MIRc SINE MIR 120 216 -52 3 1017 278 343 0 0 chrX 56733919 56734018 -109916278 + PB1D10 SINE Alu 1 99 -18 3 1017 1409 269 68 33 chrX 56734364 56734822 -109915474 + Lx5 LINE L1 6560 7033 -17 3 1017 1053 107 0 27 chrX 56734828 56735011 -109915285 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 3 1017 887 298 67 19 chrX 56735287 56735557 -109914739 + B4A SINE B4 10 292 0 3 1017 180 111 0 0 chrX 56735926 56735953 -109914343 + (GGATG)n Simple_repeat Simple_repeat 2 28 0 3 1017 371 57 0 67 chrX 56735953 56736028 -109914268 + (GGGGA)n Simple_repeat Simple_repeat 5 74 0 3 1017 343 364 80 14 chrX 56737013 56737225 -109913071 + MIRb SINE MIR 24 249 -19 3 1017 262 208 52 0 chrX 56737253 56737330 -109912966 - L1MB7 LINE L1 -1 6183 6103 3 1017 636 299 38 51 chrX 56737395 56737631 -109912665 + B4A SINE B4 58 290 -2 3 1017 222 37 0 0 chrX 56737735 56737762 -109912534 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 1017 332 350 126 10 chrX 56737768 56737967 -109912329 + MIRb SINE MIR 39 260 -8 3 1017 195 289 78 47 chrX 56738747 56738895 -109911401 + MIR3 SINE MIR 9 177 -31 3 1017 742 130 29 0 chrX 56738927 56739065 -109911231 + GA-rich Low_complexity Low_complexity 3 144 0 3 1017 206 292 67 0 chrX 56739721 56739810 -109910486 + L2 LINE L2 2419 2513 -906 3 1017 662 288 54 25 chrX 56741464 56741667 -109908629 + MER20 DNA MER1_type 6 214 -5 3 1017 213 94 0 0 chrX 56741769 56741801 -109908495 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 3 1017 240 346 124 6 chrX 56743382 56743559 -109906737 - MIR SINE MIR -26 236 39 3 1017 517 249 64 53 chrX 56743589 56743776 -109906520 - MIR SINE MIR -62 200 12 3 1017 698 302 66 5 chrX 56743791 56743987 -109906309 - B3 SINE B2 -7 209 2 3 1017 384 289 17 9 chrX 56745146 56745261 -109905035 + GA-rich Low_complexity Low_complexity 5 120 0 3 1017 779 314 129 29 chrX 56745367 56745786 -109904510 - MER74A LTR ERVL -79 479 19 3 1017 264 246 26 40 chrX 56745933 56745948 -109904348 + B4 SINE B4 70 144 -148 3 1017 374 119 0 33 chrX 56745948 56746009 -109904287 + B1_Mus1 SINE Alu 2 60 -88 3 1017 416 155 71 0 chrX 56746097 56746181 -109904115 + B1_Mus2 SINE Alu 42 131 -16 3 1017 297 0 0 0 chrX 56746208 56746241 -109904055 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 3 1017 216 353 169 0 chrX 56746265 56746472 -109903824 + L2c LINE L2 1948 2189 -1230 3 1017 192 152 0 0 chrX 56746478 56746511 -109903785 + (TAA)n Simple_repeat Simple_repeat 3 35 0 3 1017 296 350 78 18 chrX 56746520 56746738 -109903558 + L2c LINE L2 2426 2656 -763 3 1017 356 292 124 97 chrX 56746763 56746949 -109903347 - MER20 DNA MER1_type -27 192 2 3 1017 208 347 66 43 chrX 56747008 56747219 -109903077 + L2c LINE L2 2756 2971 -448 3 1017 221 0 35 0 chrX 56747236 56747265 -109903031 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 3 1017 686 73 119 0 chrX 56747265 56747374 -109902922 - L1_Mur1 LINE L1 -4058 1828 1707 3 1017 1407 96 0 5 chrX 56747375 56747584 -109902712 - L1_Mus4 LINE L1 -1 6635 6428 3 1017 3512 109 0 0 chrX 56747584 56748105 -109902191 + L1_Mm LINE L1 5360 5880 -3 3 1017 182 349 12 12 chrX 56748106 56748190 -109902106 + L2c LINE L2 2994 3077 -342 3 1017 647 312 128 19 chrX 56748420 56748888 -109901408 + LTR53 LTR ERVL 1 519 0 3 1017 1052 197 145 17 chrX 56749174 56749463 -109900833 + Lx7 LINE L1 7370 7695 -1 3 1017 799 267 29 0 chrX 56749470 56749642 -109900654 + B3 SINE B2 28 204 -12 3 1017 192 349 45 37 chrX 56749653 56749787 -109900509 + MIRb SINE MIR 25 159 -109 3 1017 1387 220 71 17 chrX 56749833 56750185 -109900111 - ORR1D1 LTR MaLR -3 371 1 3 1017 227 278 40 27 chrX 56751225 56751299 -109898997 + MIRm SINE MIR 79 153 -123 3 1017 189 288 34 184 chrX 56751523 56751702 -109898594 + L2c LINE L2 3108 3259 -128 3 1017 6770 94 8 4 chrX 56751856 56752855 -109897441 - L1_Mus4 LINE L1 0 6636 5634 3 1017 241 273 21 64 chrX 56753277 56753371 -109896925 + MIRc SINE MIR 9 98 -170 3 1017 1185 207 0 5 chrX 56753603 56753812 -109896484 + B3 SINE B2 3 210 -6 3 127 2113 154 65 17 chrX 56754114 56754516 -109895780 - MTC LTR MaLR 0 421 1 3 1018 2821 3 0 0 chrX 56754906 56755220 -109895076 - L1Md_A LINE L1 0 6582 6269 3 1018 245 289 37 102 chrX 56755726 56755834 -109894462 + MIRb SINE MIR 9 109 -159 3 1018 484 264 9 0 chrX 56755885 56755995 -109894301 + PB1D10 SINE Alu 2 112 -5 3 1018 225 296 0 0 chrX 56756009 56756063 -109894233 + GA-rich Low_complexity Low_complexity 3 56 0 3 1018 241 284 99 0 chrX 56756339 56756420 -109893876 + BC1_Mm scRNA scRNA 3 91 -61 3 1018 1092 83 0 13 chrX 56756986 56757144 -109893152 + L1Md_T LINE L1 6427 6582 0 3 1018 3508 111 4 8 chrX 56757162 56757687 -109892609 + L1_Mus3 LINE L1 6114 6636 -2 3 1018 563 108 36 0 chrX 56757791 56757902 -109892394 + (GA)n Simple_repeat Simple_repeat 2 116 0 3 1018 192 244 44 0 chrX 56758400 56758445 -109891851 + L2b LINE L2 3310 3356 -19 3 1018 646 333 52 87 chrX 56758627 56758696 -109891600 - B4A SINE B4 -6 286 227 3 1018 216 97 0 0 chrX 56758696 56758727 -109891569 + (ATTG)n Simple_repeat Simple_repeat 2 32 0 3 1018 879 181 7 0 chrX 56758730 56758874 -109891422 - B1_Mur4 SINE Alu -4 146 2 3 1018 646 333 52 87 chrX 56758874 56759030 -109891266 - B4A SINE B4 -66 226 65 3 1018 361 342 26 18 chrX 56759179 56759292 -109891004 - B1F1 SINE Alu -34 115 2 3 1018 21 0 0 0 chrX 56759312 56759333 -109890963 + AT_rich Low_complexity Low_complexity 1 21 0 3 1018 242 355 36 18 chrX 56759546 56759658 -109890638 + MIRb SINE MIR 50 163 -105 3 1018 444 37 0 0 chrX 56759710 56759764 -109890532 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 1018 311 300 24 85 chrX 56759963 56760127 -109890169 - L1M4 LINE L1 -2633 3513 3360 3 1018 1685 284 63 17 chrX 56762158 56762684 -109887612 - MER68 LTR ERVL -13 550 1 3 1018 185 409 28 14 chrX 56762751 56762895 -109887401 - MIRb SINE MIR -32 236 91 3 1018 1858 205 13 28 chrX 56763974 56764377 -109885919 - MTC LTR MaLR -1 420 1 3 1018 218 364 97 26 chrX 56765092 56765247 -109885049 + MIR SINE MIR 42 207 -55 3 1018 370 222 14 0 chrX 56765483 56765555 -109884741 - ID4_ SINE ID -9 74 2 3 1018 4767 82 17 5 chrX 56765945 56766603 -109883693 + L1_Mus3 LINE L1 5973 6638 0 3 1018 197 206 56 42 chrX 56766807 56766878 -109883418 + L4 LINE RTE 1403 1474 -555 3 1018 250 312 151 0 chrX 56766918 56766941 -109883355 + B4A SINE B4 49 155 -137 3 1018 298 286 14 0 chrX 56766941 56767011 -109883285 + B1F SINE Alu 1 71 -78 3 1018 505 224 0 27 chrX 56767287 56767397 -109882899 + PB1D10 SINE Alu 10 116 -1 4 1018 738 234 55 14 chrX 56767542 56767759 -109882537 - Charlie1a DNA MER1_type -201 1254 1029 4 1018 365 271 125 28 chrX 56767789 56767933 -109882363 + L1ME1 LINE L1 5959 6116 -63 4 1018 1422 271 68 7 chrX 56767935 56768377 -109881919 + Lx7 LINE L1 6998 7466 -230 4 1018 21 36 0 0 chrX 56769923 56769951 -109880345 + AT_rich Low_complexity Low_complexity 1 28 0 4 1018 214 362 0 0 chrX 56771268 56771337 -109878959 + L2b LINE L2 3252 3320 -55 4 1018 703 307 106 44 chrX 56771860 56772293 -109878003 + MLT1C LTR MaLR 3 462 -5 4 1018 337 305 55 63 chrX 56773027 56773265 -109877031 - MIR SINE MIR -1 261 26 4 1018 802 204 0 0 chrX 56773311 56773458 -109876838 - B1_Mur4 SINE Alu -1 149 3 4 1018 246 258 15 15 chrX 56773777 56773844 -109876452 - PB1D10 SINE Alu 0 117 51 4 1018 228 282 22 45 chrX 56774533 56774622 -109875674 - Arthur1 DNA Tip100 -8 3939 3853 4 1018 871 287 120 17 chrX 56774963 56775264 -109875032 - ORR1D2 LTR MaLR -19 351 20 4 1018 262 355 45 27 chrX 56776232 56776342 -109873954 + L2c LINE L2 3101 3212 -175 4 1018 274 277 60 141 chrX 56776960 56777159 -109873137 - MIRb SINE MIR -6 202 28 4 1018 229 356 34 11 chrX 56777176 56777264 -109873032 - PB1D10 SINE Alu -13 104 15 4 1018 541 311 75 34 chrX 56777476 56777862 -109872434 + ORR1E LTR MaLR 1 370 0 4 1018 186 333 0 0 chrX 56777991 56778036 -109872260 + L2b LINE L2 3112 3156 -219 4 1018 534 16 0 0 chrX 56778875 56778938 -109871358 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 1018 2408 87 0 60 chrX 56779096 56779465 -109870831 - L1_Mus2 LINE L1 0 6566 6220 4 1018 32 67 0 0 chrX 56779753 56779813 -109870483 + AT_rich Low_complexity Low_complexity 1 60 0 4 1018 227 242 32 16 chrX 56780184 56780247 -109870049 - Lx9 LINE L1 -520 7124 7061 4 1018 1078 269 140 11 chrX 56780281 56780631 -109869665 + Lx9 LINE L1 6633 7027 -617 4 1018 667 316 122 10 chrX 56780929 56781217 -109869079 + MER2 DNA MER2_type 3 322 -23 4 1018 21 0 0 0 chrX 56781431 56781452 -109868844 + AT_rich Low_complexity Low_complexity 1 21 0 4 1018 1364 152 51 0 chrX 56781475 56781711 -109868585 - Lx4A LINE L1 0 7058 6811 4 1018 457 238 9 9 chrX 56781908 56782014 -109868282 - MIR SINE MIR -2 260 155 4 1018 3136 72 24 0 chrX 56782088 56782504 -109867792 + L1_Mus2 LINE L1 6141 6566 0 4 1018 291 113 0 0 chrX 56782678 56782731 -109867565 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1018 423 0 0 0 chrX 56782732 56782779 -109867517 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1018 194 393 41 25 chrX 56784510 56784707 -109865589 + MIRm SINE MIR 47 245 -23 4 1018 203 302 0 31 chrX 56784713 56784778 -109865518 + MIR SINE MIR 90 152 -56 4 1018 666 312 47 47 chrX 56785968 56786287 -109864009 + LTR73 LTR ERV1 30 348 -224 4 1018 265 321 107 47 chrX 56787058 56787333 -109862963 - ORR1E LTR MaLR -15 364 50 4 1018 194 369 0 0 chrX 56787465 56787530 -109862766 + MIR SINE MIR 49 113 -95 4 1018 414 0 0 0 chrX 56788325 56788371 -109861925 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1018 332 346 10 0 chrX 56789664 56789768 -109860528 - PB1D10 SINE Alu 0 117 13 4 1018 266 289 80 42 chrX 56790608 56790872 -109859424 + L1M2 LINE L1 1527 1800 -4077 4 1018 284 275 93 19 chrX 56791027 56791364 -109858932 + L1M2 LINE L1 1992 2354 -3792 4 1018 668 12 12 0 chrX 56791565 56791646 -109858650 + (GA)n Simple_repeat Simple_repeat 1 82 0 4 1018 361 309 109 6 chrX 56791651 56791999 -109858297 + L1M2 LINE L1 2632 3015 -3128 4 1018 10958 95 16 3 chrX 56792084 56794530 -109855766 + L1_Mus2 LINE L1 4082 6566 0 4 1018 558 292 84 0 chrX 56794646 56794800 -109855496 + B3 SINE B2 48 214 -2 4 1018 503 304 0 65 chrX 56794825 56794980 -109855316 + ID_B1 SINE B4 79 223 -1 4 1018 663 301 15 25 chrX 56795067 56795271 -109855025 + B3 SINE B2 2 203 -13 4 1018 219 125 0 0 chrX 56795285 56795325 -109854971 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 1018 26 22 0 42 chrX 56795326 56795355 -109854941 + AT_rich Low_complexity Low_complexity 1 28 0 4 1018 1072 109 7 0 chrX 56795355 56795502 -109854794 - B1_Mus1 SINE Alu 0 148 1 4 1018 26 22 0 42 chrX 56795502 56795520 -109854776 + AT_rich Low_complexity Low_complexity 1 18 0 4 1018 356 324 71 7 chrX 56795642 56795782 -109854514 - MIR SINE MIR 0 262 114 4 1018 347 233 114 19 chrX 56796225 56796330 -109853966 + B3 SINE B2 65 179 -37 4 1018 220 269 141 0 chrX 56797439 56797517 -109852779 + L2a LINE L2 3075 3163 -263 4 1018 215 340 50 40 chrX 56797595 56797665 -109852631 + L2a LINE L2 3322 3393 -33 4 1018 1814 218 34 15 chrX 56797665 56798075 -109852221 + MTD LTR MaLR 1 418 -1 4 1018 215 340 50 40 chrX 56798075 56798105 -109852191 + L2a LINE L2 3394 3423 -3 4 1018 618 292 0 67 chrX 56799051 56799216 -109851080 + RSINE1 SINE B4 11 164 -1 4 1018 196 349 110 33 chrX 56799522 56799795 -109850501 + L2c LINE L2 3020 3313 -74 4 1018 706 279 85 72 chrX 56799916 56800318 -109849978 + Charlie13a DNA Charlie 1108 1514 0 4 1018 756 219 20 0 chrX 56800371 56800517 -109849779 - B1_Mur1 SINE Alu 0 149 1 4 1018 892 296 89 11 chrX 56802072 56802421 -109847875 + MTEa LTR MaLR 1 376 -3 4 1018 618 14 0 0 chrX 56802549 56802620 -109847676 + (TTTC)n Simple_repeat Simple_repeat 1 71 0 4 1018 909 119 7 9 chrX 56802672 56802822 -109847474 + Lx4B LINE L1 6701 6846 -212 4 1018 485 219 159 24 chrX 56802869 56802995 -109847301 - B1_Mur1 SINE Alu 0 149 7 4 1018 897 291 64 13 chrX 56802999 56803392 -109846904 + L1MB2 LINE L1 5685 6097 -74 4 1018 242 240 132 57 chrX 56804080 56804186 -109846110 + MIR3 SINE MIR 70 183 -25 4 1018 245 324 174 9 chrX 56804199 56804213 -109846083 + B4 SINE B4 67 191 -99 4 1018 330 301 65 0 chrX 56804213 56804306 -109845990 + PB1D10 SINE Alu 1 99 -18 4 1018 325 63 31 31 chrX 56804311 56804376 -109845920 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 4 1018 213 39 0 0 chrX 56804376 56804402 -109845894 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 1018 221 163 20 0 chrX 56805918 56805967 -109844329 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 1018 517 236 29 73 chrX 56806185 56806322 -109843974 + B1_Mur1 SINE Alu 3 133 -16 4 1018 333 345 7 13 chrX 56806388 56806509 -109843787 + L2a LINE L2 3254 3391 -35 4 1018 450 0 0 0 chrX 56807290 56807340 -109842956 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1018 691 198 217 17 chrX 56807440 56807620 -109842676 - B3 SINE B2 0 216 1 4 1018 1217 174 9 31 chrX 56808091 56808317 -109841979 - URR1A DNA MER1_type -5 221 1 4 1018 227 194 27 14 chrX 56809329 56809402 -109840894 + L1ME4a LINE L1 6051 6124 0 4 1018 1173 68 0 7 chrX 56811175 56811324 -109838972 + B1_Mus1 SINE Alu 1 148 0 4 1018 216 0 0 0 chrX 56811330 56811354 -109838942 + (GAAA)n Simple_repeat Simple_repeat 4 27 0 4 1018 958 127 6 12 chrX 56811356 56811524 -109838772 + (GAAAA)n Simple_repeat Simple_repeat 4 170 0 4 1018 26 82 0 0 chrX 56812343 56812404 -109837892 + AT_rich Low_complexity Low_complexity 1 61 0 4 1018 295 356 67 0 chrX 56812701 56812805 -109837491 - B1F2 SINE Alu -37 112 2 4 1018 240 329 0 0 chrX 56812897 56812967 -109837329 + MIR SINE MIR 72 141 -121 4 1018 1075 192 33 0 chrX 56813052 56813238 -109837058 - URR1A DNA MER1_type 0 226 37 4 1018 189 0 0 0 chrX 56813238 56813259 -109837037 + (CCA)n Simple_repeat Simple_repeat 1 21 0 4 1018 1075 192 33 0 chrX 56813259 56813286 -109837010 - URR1A DNA MER1_type -190 36 7 4 1018 603 329 56 0 chrX 56813287 56813448 -109836848 + B3A SINE B2 22 191 -7 4 1018 295 329 28 0 chrX 56813838 56813981 -109836315 + L1ME3 LINE L1 5956 6102 -60 4 1018 300 345 0 128 chrX 56814789 56814922 -109835374 + PB1D10 SINE Alu 1 116 -1 4 1018 236 278 170 30 chrX 56817198 56817298 -109832998 - PB1D10 SINE Alu -2 115 2 4 1018 243 0 0 0 chrX 56818458 56818485 -109831811 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 4 1018 232 119 0 33 chrX 56819830 56819891 -109830405 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1018 750 43 0 0 chrX 56819895 56819989 -109830307 + (GA)n Simple_repeat Simple_repeat 1 94 0 4 1018 204 208 0 0 chrX 56821304 56821352 -109828944 + G-rich Low_complexity Low_complexity 1 48 0 4 1018 373 200 0 74 chrX 56822166 56822274 -109828022 + B1_Mus2 SINE Alu 47 146 -1 4 1018 441 278 43 31 chrX 56822802 56822965 -109827331 - MIRb SINE MIR 0 268 104 4 1018 204 337 24 24 chrX 56823079 56823164 -109827132 - MIR3 SINE MIR -115 93 9 4 1018 396 0 0 0 chrX 56823275 56823319 -109826977 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1018 189 0 0 0 chrX 56823361 56823382 -109826914 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 1018 241 307 44 33 chrX 56824155 56824246 -109826050 - PB1D9 SINE Alu 0 120 29 4 1018 241 355 26 72 chrX 56824494 56824646 -109825650 + MLT1F LTR MaLR 360 504 -44 4 1018 357 288 171 34 chrX 56825169 56825338 -109824958 + MLT1G LTR MaLR 78 270 -321 4 1018 602 290 48 29 chrX 56825338 56825544 -109824752 + MTD LTR MaLR 1 210 -209 4 1018 1085 161 26 0 chrX 56825546 56825739 -109824557 + Lx5 LINE L1 6847 7044 -6 4 1018 586 161 0 67 chrX 56825772 56825892 -109824404 + B1_Mur3 SINE Alu 32 143 -6 4 1018 598 189 249 5 chrX 56825924 56826106 -109824190 + MTD LTR MaLR 179 419 0 4 1018 399 301 48 8 chrX 56826240 56826364 -109823932 + MLT1G LTR MaLR 443 571 -20 4 1018 943 210 49 0 chrX 56826948 56827153 -109823143 + B3 SINE B2 1 215 -1 4 1018 301 333 68 0 chrX 56827605 56827722 -109822574 - MIRc SINE MIR -110 158 34 4 1018 293 275 681 0 chrX 56828360 56828479 -109821817 + RMER30 DNA MER1_type 2 201 -1 5 1018 360 224 13 0 chrX 56828882 56828958 -109821338 + B1_Mur1 SINE Alu 73 149 0 5 1018 678 133 0 0 chrX 56828960 56829073 -109821223 + (GGGA)n Simple_repeat Simple_repeat 1 113 0 5 1018 225 209 70 0 chrX 56829488 56829531 -109820765 + MLT2E LTR ERVL 36 81 -547 5 1018 1621 261 25 48 chrX 56829570 56830049 -109820247 - RMER5 LTR ERV1 -66 468 1 5 1018 507 335 29 76 chrX 56830469 56830640 -109819656 - RSINE1 SINE B4 0 165 3 5 1018 326 351 137 55 chrX 56832129 56832530 -109817766 + MLT1H LTR MaLR 107 540 -9 5 1018 447 325 138 55 chrX 56832563 56833638 -109816658 + L1ME4a LINE L1 3836 4967 -1179 5 1018 557 299 42 37 chrX 56834083 56834298 -109815998 + B3 SINE B2 1 216 0 5 1018 361 330 78 61 chrX 56834340 56834634 -109815662 + L1ME4a LINE L1 5527 5825 -299 5 1018 390 268 69 0 chrX 56834727 56834829 -109815467 - B1F SINE Alu -27 122 14 5 1018 320 274 160 0 chrX 56834853 56834959 -109815337 - MIR SINE MIR -72 190 68 5 1018 35 78 0 0 chrX 56835140 56835217 -109815079 + AT_rich Low_complexity Low_complexity 1 77 0 5 1018 31 0 0 0 chrX 56835599 56835630 -109814666 + AT_rich Low_complexity Low_complexity 1 31 0 5 1018 818 252 116 50 chrX 56835676 56835918 -109814378 - B4A SINE B4 -21 271 14 5 1018 269 109 0 21 chrX 56836076 56836123 -109814173 + (CTTG)n Simple_repeat Simple_repeat 2 47 0 5 1018 217 367 154 15 chrX 56836439 56836582 -109813714 + MER5A DNA MER1_type 3 176 -13 5 1018 344 274 49 82 chrX 56836881 56837064 -109813232 - MER5A DNA MER1_type 0 189 13 5 1018 378 251 129 112 chrX 56839526 56839750 -109810546 + MER112 DNA MER1_type 2 229 -32 5 1018 612 243 50 11 chrX 56840158 56840337 -109809959 + B3A SINE B2 2 187 -11 5 1018 607 241 68 11 chrX 56840844 56841020 -109809276 + B3A SINE B2 2 187 -11 5 1018 22 0 0 0 chrX 56841671 56841693 -109808603 + AT_rich Low_complexity Low_complexity 1 22 0 5 1018 182 275 0 42 chrX 56842788 56842860 -109807436 - MIRc SINE MIR -78 190 122 5 1018 437 312 106 24 chrX 56843052 56843476 -109806820 + L1MC5 LINE L1 7456 7914 -47 5 1018 706 280 88 0 chrX 56843521 56843714 -109806582 - B3 SINE B2 -6 210 1 5 1018 603 269 47 79 chrX 56843719 56843909 -109806387 - B3A SINE B2 -1 197 14 5 1018 197 267 70 3 chrX 56844220 56844292 -109806004 - MIRm SINE MIR -141 135 57 5 1018 479 165 0 9 chrX 56845212 56845322 -109804974 + GA-rich Low_complexity Low_complexity 5 113 0 5 1018 271 326 72 22 chrX 56845538 56845676 -109804620 - L2 LINE L2 -472 2947 2803 5 1018 725 303 10 15 chrX 56845786 56845984 -109804312 + B3A SINE B2 1 197 -1 5 1018 243 312 44 111 chrX 56846016 56846196 -109804100 - MTEa LTR MaLR -9 370 203 5 1018 369 0 0 0 chrX 56846668 56846709 -109803587 + (T)n Simple_repeat Simple_repeat 1 41 0 5 1018 279 0 0 0 chrX 56847195 56847226 -109803070 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 1018 22 0 0 0 chrX 56847763 56847785 -109802511 + AT_rich Low_complexity Low_complexity 1 22 0 5 1018 280 226 57 0 chrX 56847785 56847838 -109802458 - MLT1K LTR MaLR -289 306 251 5 1018 628 298 40 15 chrX 56847842 56848043 -109802253 + Lx8 LINE L1 7143 7348 -125 5 1018 808 226 111 0 chrX 56848057 56848247 -109802049 + B3 SINE B2 6 216 0 5 1018 25 24 0 23 chrX 56848433 56848449 -109801847 + AT_rich Low_complexity Low_complexity 1 16 0 5 1018 608 259 7 7 chrX 56848449 56848593 -109801703 - B1_Mur1 SINE Alu -5 144 1 5 1018 25 24 0 23 chrX 56848593 56848619 -109801677 + AT_rich Low_complexity Low_complexity 1 26 0 5 1018 3623 274 54 50 chrX 56848899 56850176 -109800120 + Lx9 LINE L1 6360 7641 -3 5 1018 1134 284 28 28 chrX 56850292 56850691 -109799605 + L1_Rod LINE L1 78 476 -6696 5 1018 360 0 0 0 chrX 56850715 56850755 -109799541 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1018 504 0 0 0 chrX 56850755 56850810 -109799486 + (GA)n Simple_repeat Simple_repeat 2 57 0 5 1018 862 211 0 33 chrX 56850811 56851022 -109799274 + L1_Rod LINE L1 691 894 -6278 5 1018 2476 216 21 23 chrX 56851006 56851579 -109798717 + L1_Mur3 LINE L1 501 1072 -6640 5 1018 897 265 38 71 chrX 56851598 56852071 -109798225 - RLTR11B LTR ERVK -52 475 5 5 1018 14734 256 72 47 chrX 56852075 56852342 -109797954 - MYSERV-int LTR ERVK -1 6549 6292 5 1018 5063 79 0 3 chrX 56852342 56853014 -109797282 - L1_Mus1 LINE L1 -2 6565 5896 5 1018 14734 256 72 47 chrX 56853014 56857963 -109792333 - MYSERV-int LTR ERVK -259 6291 1206 5 1018 1201 290 60 42 chrX 56858007 56858867 -109791429 - MYSERV-int LTR ERVK -5477 1073 192 5 1018 467 198 58 0 chrX 56859339 56859460 -109790836 - Lx2A1 LINE L1 -2 7006 6879 5 1018 555 107 0 0 chrX 56859460 56859544 -109790752 + (TA)n Simple_repeat Simple_repeat 2 85 0 5 1018 1808 129 60 38 chrX 56859545 56859860 -109790436 - Lx2 LINE L1 -29 6968 6647 5 1018 294 324 54 66 chrX 56860191 56860432 -109789864 + RLTR12B LTR ERVK 264 501 -27 5 1018 742 208 0 44 chrX 56860543 56860679 -109789617 + B1_Mur4 SINE Alu 1 130 -20 5 1018 654 268 9 49 chrX 56860689 56860913 -109789383 + L1M3 LINE L1 3512 3726 -2414 5 1018 1073 118 0 0 chrX 56860922 56861075 -109789221 + RLTR19 LTR ERVK 43 195 -304 5 1018 981 79 65 0 chrX 56861077 56861216 -109789080 + B1_Mus1 SINE Alu 1 148 0 5 1018 767 108 8 0 chrX 56861217 56861337 -109788959 + (GAAA)n Simple_repeat Simple_repeat 2 122 0 5 1018 1204 211 61 31 chrX 56861337 56861630 -109788666 + RLTR19 LTR ERVK 185 486 -13 5 1018 2795 220 40 52 chrX 56861637 56862496 -109787800 + L1_Rod LINE L1 3709 4556 -1291 5 1018 3339 116 25 8 chrX 56862493 56863004 -109787292 + L1_Mm LINE L1 5166 5685 -198 5 1018 49 14 0 28 chrX 56863004 56863041 -109787255 + AT_rich Low_complexity Low_complexity 1 37 0 5 1018 728 73 0 31 chrX 56863041 56863169 -109787127 + L1Md_F3 LINE L1 6445 6568 -16 5 1018 49 14 0 28 chrX 56863169 56863202 -109787094 + AT_rich Low_complexity Low_complexity 1 32 0 5 1018 182 359 31 0 chrX 56863415 56863479 -109786817 - MIR3 SINE MIR -46 162 97 5 1018 520 308 60 0 chrX 56863813 56863946 -109786350 + RSINE1 SINE B4 3 143 -22 5 1018 516 32 0 0 chrX 56863962 56864024 -109786272 + (CA)n Simple_repeat Simple_repeat 2 63 0 5 1018 647 235 14 22 chrX 56865006 56865145 -109785151 + B1_Mur1 SINE Alu 7 144 -5 5 1018 2262 182 56 0 chrX 56865229 56865625 -109784671 - MTC LTR MaLR -3 418 1 5 1018 269 277 40 56 chrX 56865741 56865867 -109784429 + MIRb SINE MIR 118 241 -27 5 1018 254 321 0 36 chrX 56866443 56866553 -109783743 + CT-rich Low_complexity Low_complexity 1 106 0 5 1018 212 281 35 0 chrX 56866658 56866715 -109783581 - MIR SINE MIR -126 136 78 5 1018 287 301 103 18 chrX 56866722 56866889 -109783407 - MIR SINE MIR 0 262 85 5 1018 825 124 0 0 chrX 56867440 56867569 -109782727 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 5 1018 400 267 28 56 chrX 56867708 56867851 -109782445 - MIRc SINE MIR -119 149 11 5 1018 851 289 65 28 chrX 56868884 56869205 -109781091 - MER44A DNA MER2_type -1 338 6 5 1018 304 324 71 29 chrX 56869484 56869624 -109780672 + MER117 DNA MER1_type 36 181 -16 5 1018 320 308 119 8 chrX 56869638 56869756 -109780540 - MER5A DNA MER1_type -24 165 35 5 1018 936 93 13 13 chrX 56869808 56869961 -109780335 - L1_Mus3 LINE L1 -9 6629 6477 5 1018 525 158 0 0 chrX 56869961 56870037 -109780259 + L1_Mus3 LINE L1 6410 6485 -153 5 1018 261 345 50 41 chrX 56870044 56870165 -109780131 - MER5A1 DNA MER1_type -43 123 2 5 1018 216 0 0 0 chrX 56870168 56870192 -109780104 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1018 231 36 0 0 chrX 56870377 56870405 -109779891 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 5 1018 387 233 131 29 chrX 56870405 56870542 -109779754 + L1_Mur3 LINE L1 4150 4300 -1580 5 1018 1262 91 30 0 chrX 56870553 56870752 -109779544 - Lx3_Mus LINE L1 -13 6996 6792 5 1018 1082 65 22 0 chrX 56871042 56871181 -109779115 + B1_Mus2 SINE Alu 1 142 -5 5 1018 618 279 91 0 chrX 56871309 56871463 -109778833 + B3 SINE B2 11 178 -38 5 1018 234 0 0 0 chrX 56871477 56871503 -109778793 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1018 696 130 0 0 chrX 56871523 56871638 -109778658 + (TAGA)n Simple_repeat Simple_repeat 2 116 0 5 1018 491 257 17 34 chrX 56872085 56872202 -109778094 - B3A SINE B2 -81 117 3 5 1018 1119 219 0 0 chrX 56873242 56873452 -109776844 + B3 SINE B2 3 212 -4 5 1018 756 234 94 0 chrX 56873666 56873711 -109776585 - B3 SINE B2 -6 210 154 5 1018 450 0 0 0 chrX 56873711 56873761 -109776535 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1018 756 234 94 0 chrX 56873761 56873907 -109776389 - B3 SINE B2 -63 153 2 5 1018 381 22 0 0 chrX 56874361 56874407 -109775889 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 5 1018 549 219 86 0 chrX 56875048 56875176 -109775120 + B1_Mur1 SINE Alu 1 139 -10 5 1018 1041 95 0 0 chrX 56875181 56875350 -109774946 + (GA)n Simple_repeat Simple_repeat 2 170 0 5 1018 369 0 0 0 chrX 56875940 56875981 -109774315 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 1018 703 229 7 0 chrX 56876010 56876150 -109774146 + B1_Mur2 SINE Alu 2 142 -7 5 1018 198 0 0 0 chrX 56876176 56876198 -109774098 + (CAA)n Simple_repeat Simple_repeat 2 23 0 5 1018 822 255 0 21 chrX 56876368 56876556 -109773740 - B3 SINE B2 -10 206 23 5 1018 350 278 148 26 chrX 56876633 56876788 -109773508 - MIR SINE MIR -1 261 88 5 1018 728 285 40 26 chrX 56877301 56877528 -109772768 + ORR1E LTR MaLR 1 230 -129 5 1018 732 164 0 0 chrX 56877697 56877831 -109772465 + (CATATA)n Simple_repeat Simple_repeat 6 139 0 5 1018 431 315 51 5 chrX 56878181 56878398 -109771898 - L1_Mur3 LINE L1 -585 5295 5069 5 1018 1167 257 65 112 chrX 56878433 56878964 -109771332 - L1_Mur3 LINE L1 -1035 4845 4341 5 1018 1456 63 5 11 chrX 56878964 56879155 -109771141 - B2_Mm1t SINE B2 -2 191 2 5 1018 1167 257 65 112 chrX 56879155 56879205 -109771091 - L1_Mur3 LINE L1 -1540 4340 4291 5 1018 238 113 19 0 chrX 56879343 56879374 -109770922 - Lx7 LINE L1 -329 7367 7337 5 1018 522 0 0 0 chrX 56879374 56879432 -109770864 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 1018 238 113 19 0 chrX 56879432 56879453 -109770843 - Lx7 LINE L1 -360 7336 7315 5 1018 581 276 44 11 chrX 56879461 56879644 -109770652 + Lx7 LINE L1 7501 7689 -7 6 1018 1770 259 56 16 chrX 56879669 56880224 -109770072 - Lx6 LINE L1 -27 7433 6485 6 1018 10815 179 14 15 chrX 56880263 56882679 -109767617 - Lx6 LINE L1 -1200 6260 3836 6 1018 406 259 102 44 chrX 56882679 56882885 -109767411 + L1M2 LINE L1 5353 5570 -727 6 1018 2286 168 8 0 chrX 56882885 56883260 -109767036 - RLTR17 LTR ERVK 0 692 315 6 1018 22 35 0 0 chrX 56883280 56883309 -109766987 + AT_rich Low_complexity Low_complexity 1 29 0 6 1018 8109 47 4 1 chrX 56883319 56884444 -109765852 - L1Md_F2 LINE L1 0 6582 5455 6 1018 2050 146 9 6 chrX 56884444 56884769 -109765527 - RLTR17 LTR ERVK -363 329 4 6 1018 536 185 9 0 chrX 56884769 56884877 -109765419 - RMER3D-int LTR ERVK 0 2842 2734 6 1018 307 274 28 28 chrX 56884897 56885008 -109765288 + L1_Mur3 LINE L1 5547 5656 -522 6 1019 266 275 61 18 chrX 56885354 56885517 -109764779 + L1MEe LINE L1 150 319 -4535 6 1019 1229 124 11 0 chrX 56885763 56885949 -109764347 + B2_Mm2 SINE B2 1 188 -7 6 1019 745 304 65 61 chrX 56886311 56886617 -109763679 + ORR1D2 LTR MaLR 11 370 0 6 1019 2592 137 29 5 chrX 56886690 56887102 -109763194 + RLTR13D2 LTR ERVK 1 422 -601 6 1019 24778 92 22 1 chrX 56887102 56889969 -109760327 + L1Md_F2 LINE L1 519 3448 -2435 6 1019 585 0 0 0 chrX 56889969 56890034 -109760262 + (GA)n Simple_repeat Simple_repeat 2 66 0 6 1019 24778 85 3 2 chrX 56890034 56891458 -109758838 + L1Md_F2 LINE L1 3449 4874 -1009 6 1019 36096 42 0 3 chrX 56891881 56898114 -109752182 - L1Md_T LINE L1 0 6585 275 6 1019 5090 87 1 1 chrX 56898100 56898829 -109751467 + L1Md_F2 LINE L1 4857 5585 -298 6 1019 7600 72 4 2 chrX 56898830 56899855 -109750441 + L1Md_F2 LINE L1 5587 6582 0 6 1019 312 327 0 27 chrX 56899954 56900064 -109750232 + PB1D10 SINE Alu 5 111 -6 6 1019 2182 63 17 10 chrX 56900067 56900369 -109749927 + L1Md_F2 LINE L1 6277 6580 -2 6 1019 622 310 118 0 chrX 56900373 56900560 -109749736 + B3 SINE B2 8 216 0 6 1019 22 70 0 0 chrX 56900622 56900665 -109749631 + AT_rich Low_complexity Low_complexity 1 43 0 6 1019 361 377 18 54 chrX 56900993 56901161 -109749135 + RSINE1 SINE B4 3 164 -1 6 1019 36 77 0 0 chrX 56901303 56901381 -109748915 + AT_rich Low_complexity Low_complexity 1 78 0 6 1019 4561 113 19 137 chrX 56901784 56902626 -109747670 + L1VL2 LINE L1 66 786 -5549 6 1019 8941 6 3 0 chrX 56902626 56903618 -109746678 + L1Md_T LINE L1 5587 6581 -1 6 1019 4561 113 19 137 chrX 56903618 56903782 -109746514 + L1VL2 LINE L1 787 953 -5382 6 1019 2582 44 9 0 chrX 56903783 56904101 -109746195 + L1Md_F3 LINE L1 6250 6570 -14 6 1019 23 54 0 0 chrX 56904110 56904147 -109746149 + AT_rich Low_complexity Low_complexity 1 37 0 6 1019 337 242 78 39 chrX 56904421 56904524 -109745772 + L1M2 LINE L1 2745 2851 -3295 6 1019 319 334 195 36 chrX 56904494 56904890 -109745406 + L1M5 LINE L1 3599 4057 -2089 6 1019 309 118 0 0 chrX 56905096 56905147 -109745149 + (CAA)n Simple_repeat Simple_repeat 2 52 0 6 1019 28 29 0 0 chrX 56905240 56905275 -109745021 + AT_rich Low_complexity Low_complexity 1 35 0 6 1019 912 135 0 0 chrX 56906379 56906527 -109743769 + (GA)n Simple_repeat Simple_repeat 2 149 0 6 1019 468 35 0 0 chrX 56906764 56906822 -109743474 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 1019 4743 47 0 2 chrX 56906888 56907465 -109742831 + L1Md_F2 LINE L1 5996 6571 -11 6 1019 4028 137 63 3 chrX 56907639 56907991 -109742305 - RMER6D LTR ERVK 0 720 337 6 1019 417 20 0 0 chrX 56907991 56908041 -109742255 + (TC)n Simple_repeat Simple_repeat 2 51 0 6 1019 4028 137 63 3 chrX 56908041 56908367 -109741929 - RMER6D LTR ERVK -384 336 2 6 1019 250 266 57 7 chrX 56908389 56908529 -109741767 + L1M4 LINE L1 3821 3967 -2179 6 1019 439 339 8 8 chrX 56908586 56908714 -109741582 + ID_B1 SINE B4 88 215 -9 6 1019 474 18 0 0 chrX 56908715 56908770 -109741526 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1019 428 299 25 19 chrX 56908940 56909100 -109741196 + Lx9 LINE L1 5816 5976 -1668 6 1019 726 67 0 0 chrX 56909477 56909582 -109740714 + (TC)n Simple_repeat Simple_repeat 2 106 0 6 1019 1425 174 12 8 chrX 56909582 56909831 -109740465 + MTC LTR MaLR 164 413 -8 6 1019 360 64 0 0 chrX 56909979 56910026 -109740270 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1019 274 138 0 33 chrX 56910116 56910176 -109740120 + (TA)n Simple_repeat Simple_repeat 2 59 0 6 1019 266 211 17 17 chrX 56910278 56910336 -109739960 + B4A SINE B4 4 61 -231 6 1019 23787 123 30 13 chrX 56910965 56914600 -109735696 - L1_Mus3 LINE L1 -3 6635 2999 6 1019 315 0 0 0 chrX 56914600 56914635 -109735661 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1019 23787 135 34 14 chrX 56914635 56916110 -109734186 - L1_Mus3 LINE L1 -2885 2998 1443 6 1019 7243 60 10 21 chrX 56916137 56917761 -109732535 - L1Md_T LINE L1 -3 6579 4973 6 1019 16665 86 3 1 chrX 56917752 56920207 -109730089 - L1Md_T LINE L1 -1748 4135 1677 6 1019 8981 26 31 31 chrX 56920179 56921828 -109728468 - L1Md_T LINE L1 0 6582 4882 6 1019 228 179 50 67 chrX 56921828 56921888 -109728408 + RMER20A LTR ERVK 186 244 -272 6 1019 8981 26 31 31 chrX 56921888 56922115 -109728181 - L1Md_T LINE L1 0 4881 4646 6 1019 5441 11 0 0 chrX 56922113 56922765 -109727531 + L1Md_T LINE L1 3968 4619 -1264 6 1019 2484 70 0 0 chrX 56922764 56923137 -109727159 - L1Md_F LINE L1 -4165 1718 1346 6 1019 39374 6 1 0 chrX 56923136 56929710 -109720586 - L1Md_A LINE L1 0 6582 7 6 1019 6728 80 8 4 chrX 56929710 56930759 -109719537 - L1Md_F LINE L1 -4522 1361 304 6 1019 4390 153 41 15 chrX 56930754 56931778 -109718518 - L1VL1 LINE L1 -2453 1245 191 6 1019 26 74 0 0 chrX 56931794 56931848 -109718448 + AT_rich Low_complexity Low_complexity 1 54 0 6 1019 2881 26 0 3 chrX 56931859 56932206 -109718090 - ORR1A0 LTR MaLR 0 346 1 6 1019 588 312 39 0 chrX 56932322 56932476 -109717820 + B3A SINE B2 8 167 -31 6 1019 180 0 0 0 chrX 56932502 56932522 -109717774 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 6 1019 1362 245 106 35 chrX 56932856 56933346 -109716950 + RMER5 LTR ERV1 1 525 -9 6 1019 245 291 139 27 chrX 56933385 56933572 -109716724 - Charlie2b DNA MER1_type -666 2116 1909 6 1019 874 274 53 75 chrX 56933596 56934250 -109716046 + L1MA8 LINE L1 5567 6169 -122 6 1019 319 230 92 0 chrX 56934709 56934796 -109715500 + B1_Mur1 SINE Alu 33 127 -22 6 1019 800 94 53 0 chrX 56934810 56934980 -109715316 + (TAGA)n Simple_repeat Simple_repeat 1 179 0 6 1019 252 213 0 0 chrX 56934984 56935045 -109715251 + (TATG)n Simple_repeat Simple_repeat 3 63 0 6 1019 242 298 0 35 chrX 56935463 56935548 -109714748 + MIRb SINE MIR 11 97 -171 6 1019 8907 163 35 7 chrX 56935790 56937644 -109712652 + L1_Mur2 LINE L1 2520 4425 -1452 6 1019 264 120 0 0 chrX 56937668 56937718 -109712578 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 6 1019 689 140 81 47 chrX 56937731 56937903 -109712393 + Lx2B LINE L1 6818 6995 -5 6 1019 1219 115 5 21 chrX 56937940 56938127 -109712169 + B2_Mm1t SINE B2 1 184 -9 6 1019 899 264 214 32 chrX 56938142 56938533 -109711763 + Lx5 LINE L1 6588 7049 -1 6 1019 285 346 56 9 chrX 56938986 56939094 -109711202 - PB1D10 SINE Alu -1 116 4 6 1019 329 296 111 0 chrX 56939098 56939233 -109711063 - L1M4 LINE L1 -1679 4965 4816 6 1019 838 250 95 6 chrX 56939681 56940007 -109710289 - L1M4 LINE L1 -1828 4810 4456 6 1019 996 92 0 0 chrX 56940350 56940491 -109709805 + (TTCC)n Simple_repeat Simple_repeat 3 143 0 6 1019 1657 173 35 19 chrX 56940497 56940809 -109709487 - Lx3B LINE L1 -4 6969 6653 6 1019 3896 85 4 13 chrX 56940817 56941353 -109708943 - L1_Mus3 LINE L1 -1 6637 6107 6 1019 1010 62 20 0 chrX 56941375 56941630 -109708666 + L1_Mus3 LINE L1 6478 6638 0 6 1019 349 311 112 23 chrX 56941652 56941866 -109708430 - L1M4 LINE L1 -6286 256 24 6 1019 189 362 121 0 chrX 56942507 56942623 -109707673 - MIR3 SINE MIR -25 183 54 6 1019 540 156 8 135 chrX 56943177 56943303 -109706993 + B1_Mur4 SINE Alu 7 116 -34 6 1019 333 279 45 97 chrX 56943183 56943338 -109706958 + B4 SINE B4 97 243 -49 6 1019 606 176 0 0 chrX 56943338 56943457 -109706839 + (TA)n Simple_repeat Simple_repeat 2 120 0 6 1019 189 74 0 0 chrX 56943522 56943549 -109706747 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 6 1019 214 270 76 45 chrX 56944220 56944286 -109706010 + MIRm SINE MIR 209 276 0 6 1019 603 0 0 0 chrX 56944768 56944835 -109705461 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 6 1019 1129 255 64 22 chrX 56945440 56945944 -109704352 - Lx9 LINE L1 -7 7637 7086 6 1019 726 12 0 0 chrX 56946628 56946711 -109703585 + (CTG)n Simple_repeat Simple_repeat 2 84 0 6 1019 252 382 106 51 chrX 56946809 56947006 -109703290 + MIRb SINE MIR 13 223 -45 6 1019 727 201 232 102 chrX 56947006 56947338 -109702958 + MTE2a LTR MaLR 3 377 -2 6 1019 252 382 106 51 chrX 56947338 56947377 -109702919 + MIRb SINE MIR 224 262 -6 6 1019 830 320 65 11 chrX 56947547 56947825 -109702471 + MTD LTR MaLR 5 297 -122 6 1019 686 45 0 0 chrX 56947870 56947959 -109702337 - BC1_Mm scRNA scRNA -63 89 1 6 1019 1093 261 156 87 chrX 56948038 56948227 -109702069 + MTD-int LTR MaLR 38 241 -1017 6 1019 585 64 0 0 chrX 56948227 56948305 -109701991 + (GA)n Simple_repeat Simple_repeat 1 78 0 6 1019 1093 258 127 80 chrX 56948305 56948816 -109701480 + MTD-int LTR MaLR 242 917 -341 6 1019 621 246 91 61 chrX 56948842 56949171 -109701125 + RLTR15 LTR ERVK 1 339 -20 6 1019 821 246 102 23 chrX 56949180 56949475 -109700821 + MTD-int LTR MaLR 923 1241 -17 6 1019 918 331 69 52 chrX 56949475 56949883 -109700413 + MTD LTR MaLR 4 418 -1 6 1019 186 324 27 13 chrX 56949892 56949967 -109700329 + MIRb SINE MIR 148 223 -45 6 1019 181 320 119 10 chrX 56950990 56951091 -109699205 - MIR SINE MIR -77 185 74 6 1019 281 340 19 0 chrX 56951163 56951266 -109699030 + MIR SINE MIR 109 213 -49 6 1019 1425 97 83 9 chrX 56951649 56951879 -109698417 + Lx LINE L1 6406 6652 -2 6 1019 319 155 52 0 chrX 56952818 56952973 -109697323 + (CA)n Simple_repeat Simple_repeat 1 163 0 6 1019 581 275 82 0 chrX 56952973 56953144 -109697152 - Lx7 LINE L1 -382 7314 7130 6 1019 218 400 0 11 chrX 56953560 56953651 -109696645 - L2b LINE L2 0 3375 3286 6 1019 226 250 0 16 chrX 56954431 56954492 -109695804 + CT-rich Low_complexity Low_complexity 3 62 0 6 1019 9000 154 20 2 chrX 56954496 56956731 -109693565 - Lx2 LINE L1 -487 6510 4226 6 1019 25 31 0 0 chrX 56958568 56958600 -109691696 + AT_rich Low_complexity Low_complexity 1 32 0 6 1019 1008 40 0 0 chrX 56958612 56958737 -109691559 + (GGGAGA)n Simple_repeat Simple_repeat 3 127 0 6 1019 485 280 39 23 chrX 56958773 56958901 -109691395 - RSINE1 SINE B4 -33 132 3 6 1019 401 200 28 0 chrX 56959031 56959117 -109691179 - B2_Mm2 SINE B2 -101 92 3 7 1019 1288 327 31 69 chrX 56959723 56960582 -109689714 - Lx8 LINE L1 -1066 6407 5572 7 1019 5912 48 1 3 chrX 56960582 56961316 -109688980 - L1Md_F2 LINE L1 0 6582 5850 7 1019 1288 303 22 73 chrX 56961316 56961470 -109688826 - Lx8 LINE L1 -309 5571 5437 7 1019 212 0 36 0 chrX 56961470 56961498 -109688798 + (TTG)n Simple_repeat Simple_repeat 2 30 0 7 1019 1288 303 22 73 chrX 56961498 56961666 -109688630 - Lx8 LINE L1 -444 5436 5279 7 1019 728 261 0 28 chrX 56961671 56961852 -109688444 - B3 SINE B2 -14 202 27 7 1019 1406 269 68 31 chrX 56961855 56962369 -109687927 - Lx8 LINE L1 -669 5211 4679 7 1019 850 81 14 14 chrX 56962386 56962524 -109687772 - L1_Mus2 LINE L1 0 6566 6429 7 1019 248 337 35 35 chrX 56963182 56963268 -109687028 - L2a LINE L2 -34 3392 3307 7 1019 478 273 125 18 chrX 56963524 56963748 -109686548 + Lx8 LINE L1 7226 7473 0 7 1019 335 200 18 0 chrX 56964064 56964119 -109686177 + Tigger1 DNA MER2_type 69 124 -2294 7 1019 594 319 30 17 chrX 56964111 56964341 -109685955 + Tigger1 DNA MER2_type 2184 2416 -2 7 1019 1603 244 53 28 chrX 56965353 56965784 -109684512 - Lx8 LINE L1 -353 7120 6679 7 1019 1137 302 37 0 chrX 56966157 56966511 -109683785 + Lx8 LINE L1 6646 7012 -461 7 1019 682 250 20 15 chrX 56966535 56966738 -109683558 - L1MA9 LINE L1 -54 6258 6055 7 1019 1557 230 32 97 chrX 56967178 56967684 -109682612 + Lx8 LINE L1 7000 7472 -1 7 1019 1102 334 83 5 chrX 56967965 56968374 -109681922 + MLT1D LTR MaLR 21 461 -44 7 1019 272 273 26 0 chrX 56968530 56968607 -109681689 - Charlie18a DNA MER1_type -129 213 135 7 1019 247 322 133 0 chrX 56968683 56968773 -109681523 - PB1D7 SINE Alu -2 118 17 7 1019 408 322 0 57 chrX 56969391 56969549 -109680747 - MIRb SINE MIR -7 261 113 7 1019 33 25 0 0 chrX 56969790 56969830 -109680466 + AT_rich Low_complexity Low_complexity 1 40 0 7 1019 384 22 0 0 chrX 56969910 56969955 -109680341 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1019 1141 99 35 6 chrX 56969972 56970144 -109680152 + B2_Mm2 SINE B2 2 178 -17 7 1019 814 245 46 74 chrX 56970148 56970263 -109680033 - B3 SINE B2 -5 211 97 7 1019 857 194 133 0 chrX 56970263 56970459 -109679837 - URR1A DNA MER1_type -2 224 3 7 1019 814 245 46 74 chrX 56970459 56970559 -109679737 - B3 SINE B2 -120 96 2 7 1019 2071 160 147 10 chrX 56970985 56971057 -109679239 - L1_Mur3 LINE L1 -1174 4706 4617 7 1019 402 21 0 0 chrX 56971057 56971104 -109679192 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1019 2071 160 147 10 chrX 56971104 56971529 -109678767 - Lx7 LINE L1 -1264 4616 4142 7 1019 4179 175 85 91 chrX 56971519 56971702 -109678594 + Lx7 LINE L1 4697 4864 -1016 7 1019 1019 59 82 0 chrX 56971702 56971837 -109678459 + B1_Mus2 SINE Alu 1 146 -1 7 1019 6386 195 114 52 chrX 56971837 56974030 -109676266 + Lx7 LINE L1 4865 7198 -498 7 1019 2428 167 7 2 chrX 56974035 56974450 -109675846 - MTC LTR MaLR 0 421 5 7 1019 650 24 0 24 chrX 56974559 56974644 -109675652 + (GGGAGA)n Simple_repeat Simple_repeat 3 85 0 7 1019 3184 283 88 32 chrX 56974688 56975860 -109674436 + Lx8 LINE L1 6208 7444 -29 7 1019 40564 12 1 6 chrX 56975859 56982051 -109668245 - L1Md_A LINE L1 0 6582 430 7 1019 349 156 26 0 chrX 56982103 56982180 -109668116 + GA-rich Low_complexity Low_complexity 2 80 0 7 1019 380 232 26 26 chrX 56982190 56982305 -109667991 - L1MA5A LINE L1 -375 5928 5814 7 1019 399 239 146 0 chrX 56982320 56982450 -109667846 - L1MA5A LINE L1 -463 5834 5686 7 1019 1075 236 5 0 chrX 56982751 56982959 -109667337 - B3 SINE B2 -7 209 1 7 1019 693 224 100 0 chrX 56984630 56984800 -109665496 + Lx9 LINE L1 6509 6695 -949 7 1019 33 0 0 0 chrX 56984817 56984850 -109665446 + AT_rich Low_complexity Low_complexity 1 33 0 7 1019 277 366 46 52 chrX 56984951 56985124 -109665172 + MIR SINE MIR 10 181 -81 7 1019 469 267 22 30 chrX 56985532 56985667 -109664629 - RMER30 DNA MER1_type -68 134 1 7 1019 1209 250 106 3 chrX 56986276 56986617 -109663679 + MTD LTR MaLR 9 384 -35 7 1019 528 16 0 0 chrX 56986948 56987009 -109663287 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1019 322 399 47 11 chrX 56987272 56987462 -109662834 + MIRb SINE MIR 55 251 -17 7 1019 587 260 15 52 chrX 56988232 56988366 -109661930 + RSINE1 SINE B4 35 163 -2 7 1019 241 357 35 9 chrX 56988622 56988735 -109661561 + MIRc SINE MIR 46 161 -107 7 1019 15081 151 13 11 chrX 56989392 56992997 -109657299 - L1_Mus4 LINE L1 -2 6634 3023 7 1019 260 175 0 0 chrX 56993267 56993307 -109656989 + B2_Mm2 SINE B2 2 41 -154 7 1019 31086 87 8 3 chrX 56993308 56998612 -109651684 + L1Md_F2 LINE L1 257 5586 -297 7 1019 7566 68 5 9 chrX 56998612 56999612 -109650684 + L1Md_F2 LINE L1 5587 6582 0 7 1019 210 37 0 0 chrX 56999666 56999693 -109650603 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1019 456 272 85 85 chrX 56999693 56999857 -109650439 + B3 SINE B2 28 192 -1 7 1019 663 281 0 0 chrX 56999859 56999998 -109650298 + B3 SINE B2 27 165 -51 7 1019 25 31 0 0 chrX 57000033 57000065 -109650231 + AT_rich Low_complexity Low_complexity 1 32 0 1 1019 501 219 163 30 chrX 57000159 57000270 -109650026 + B1_Mur2 SINE Alu 7 139 -10 2 1019 425 299 31 0 chrX 57000333 57000460 -109649836 + MLT1J1 LTR MaLR 48 178 -266 3 1019 778 228 111 0 chrX 57000669 57000858 -109649438 - B3 SINE B2 -5 211 2 4 1019 186 43 0 0 chrX 57001310 57001333 -109648963 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1019 342 0 0 0 chrX 57001333 57001370 -109648926 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 1019 438 322 8 0 chrX 57001370 57001488 -109648808 - RSINE1 SINE B4 -45 120 2 7 1019 25 0 0 0 chrX 57001573 57001598 -109648698 + AT_rich Low_complexity Low_complexity 1 25 0 8 1019 1124 303 33 14 chrX 57002155 57002945 -109647351 + RMER1C Other Other 57 852 -490 9 1019 1741 222 17 36 chrX 57002927 57003343 -109646953 + RMER1B Other Other 460 867 -199 9 1019 602 136 0 0 chrX 57003343 57003446 -109646850 + L1_Mur3 LINE L1 4489 4591 -1289 1 1019 293 171 35 47 chrX 57003452 57003538 -109646758 + Lx3C LINE L1 6892 6976 0 1 1019 677 240 125 5 chrX 57003535 57003719 -109646577 + RMER1B Other Other 852 1057 -9 9 1019 317 276 8 60 chrX 57004192 57004308 -109645988 + B1_Mus1 SINE Alu 7 150 0 1 1019 250 331 96 44 chrX 57004882 57005018 -109645278 - MIRb SINE MIR -40 228 86 1 1019 192 268 0 0 chrX 57005297 57005338 -109644958 + MIR SINE MIR 220 260 -2 1 1019 866 313 159 17 chrX 57005544 57005902 -109644394 - MTD LTR MaLR 0 419 11 1 1019 1466 243 17 23 chrX 57006212 57006557 -109643739 - ORR1D1 LTR MaLR -31 343 1 1 1019 338 296 46 0 chrX 57006663 57006771 -109643525 - MER94 DNA AcHobo 0 134 22 1 1019 23 0 0 0 chrX 57006959 57006982 -109643314 + AT_rich Low_complexity Low_complexity 1 23 0 1 1019 625 253 94 39 chrX 57007900 57008134 -109642162 - Lx7 LINE L1 -284 7412 7166 1 1019 4233 205 43 9 chrX 57008151 57009422 -109640874 - Lx7 LINE L1 -1020 6676 5350 1 1019 221 298 260 19 chrX 57010362 57010516 -109639780 + MIRb SINE MIR 20 210 -58 2 1019 358 134 15 15 chrX 57010525 57010593 -109639703 - Lx2B LINE L1 -1134 5866 5799 2 1019 2956 194 30 11 chrX 57010575 57011235 -109639061 + Lx2B LINE L1 5900 6572 -428 2 1019 5979 8 0 0 chrX 57011354 57012015 -109638281 + L1Md_T LINE L1 5922 6582 0 2 1019 1571 229 14 19 chrX 57012390 57012804 -109637492 + Lx2B LINE L1 6570 6981 -19 2 1019 182 102 0 93 chrX 57012825 57012868 -109637428 + A-rich Low_complexity Low_complexity 2 40 0 2 1019 698 231 0 20 chrX 57014168 57014318 -109635978 - B1_Mus2 SINE Alu 0 147 1 2 1019 230 328 25 0 chrX 57014318 57014440 -109635856 + L1MA4 LINE L1 2993 3117 -3026 2 1019 275 318 32 0 chrX 57014420 57014546 -109635750 + L1_Mur1 LINE L1 3126 3255 -2631 2 1019 518 253 88 38 chrX 57014566 57014796 -109635500 + L1MA4 LINE L1 4796 5037 -1106 2 1019 807 88 0 0 chrX 57014796 57014909 -109635387 + (GGAAA)n Simple_repeat Simple_repeat 3 115 0 2 1019 1427 257 73 58 chrX 57014967 57015336 -109634960 + MTD LTR MaLR 1 380 -39 2 1019 1098 78 0 7 chrX 57015336 57015490 -109634806 - L1_Mus2 LINE L1 0 6566 6414 2 1019 1427 257 73 58 chrX 57015490 57015533 -109634763 + MTD LTR MaLR 381 419 0 2 1019 233 191 204 26 chrX 57015586 57015699 -109634597 + L1_Rod LINE L1 5091 5223 -624 3 1019 797 284 83 21 chrX 57015752 57016231 -109634065 + L1MA4 LINE L1 5417 5925 -375 2 1020 588 188 128 38 chrX 57016479 57016612 -109633684 - B1_Mur4 SINE Alu 0 150 6 3 1020 1097 213 33 40 chrX 57016860 57017163 -109633133 + Lx4B LINE L1 6753 7053 -5 3 1020 25 31 0 0 chrX 57017164 57017196 -109633100 + AT_rich Low_complexity Low_complexity 1 32 0 3 1020 761 321 96 61 chrX 57017753 57017896 -109632400 - ORR1E LTR MaLR 0 359 194 3 1020 1363 80 10 5 chrX 57017896 57018096 -109632200 + L1_Mus3 LINE L1 6437 6637 -1 3 1020 761 321 96 61 chrX 57018096 57018297 -109631999 - ORR1E LTR MaLR -166 193 3 3 1020 2522 59 46 12 chrX 57018375 57018720 -109631576 + L1_Mus1 LINE L1 6211 6567 0 3 1020 247 83 0 0 chrX 57018791 57018827 -109631469 - L1_Mur2 LINE L1 -268 5609 5574 3 1020 2244 92 19 0 chrX 57018827 57019141 -109631155 + ORR1A2 LTR MaLR 1 320 -7 3 1020 1955 148 3 3 chrX 57019142 57019474 -109630822 - L1_Mur2 LINE L1 -298 5579 5248 3 1020 598 107 89 0 chrX 57019475 57019587 -109630709 + Lx4B LINE L1 5749 5870 -1188 3 1020 1887 252 51 11 chrX 57019592 57020142 -109630154 + Lx5 LINE L1 6479 7050 0 4 1020 345 234 237 23 chrX 57020714 57020845 -109629451 - B3 SINE B2 -38 178 20 4 1020 1719 64 0 0 chrX 57021919 57022138 -109628158 - MTB LTR MaLR 0 400 182 4 1020 230 114 0 0 chrX 57022434 57022469 -109627827 - RMER1C Other Other -29 1313 1279 4 1020 973 145 18 6 chrX 57022469 57022636 -109627660 - MTB LTR MaLR -193 214 46 4 1020 961 75 8 0 chrX 57022638 57022772 -109627524 - MTB LTR MaLR -38 362 228 4 1020 6626 99 18 71 chrX 57022773 57023905 -109626391 - MTB-int LTR MaLR -26 1072 1 4 1020 2935 78 13 2 chrX 57023905 57024301 -109625995 - MTB LTR MaLR 0 400 1 4 1020 13765 56 2 0 chrX 57024864 57027400 -109622896 - L1Md_F2 LINE L1 -13 6569 4029 4 1020 233 128 0 0 chrX 57027672 57027711 -109622585 + L1MD2 LINE L1 6284 6322 -37 4 1020 244 191 59 0 chrX 57027723 57027791 -109622505 - L1M2 LINE L1 -779 5392 5321 4 1020 258 295 0 0 chrX 57028273 57028368 -109621928 - L1M2 LINE L1 -1340 4803 4709 4 1020 490 309 121 43 chrX 57028494 57028603 -109621693 - L1MDb LINE L1 -4586 2047 1937 4 1020 445 282 144 36 chrX 57028603 57028798 -109621498 + B3 SINE B2 1 216 0 5 1020 490 309 121 43 chrX 57028798 57029036 -109621260 - L1MDb LINE L1 -4697 1936 1673 4 1020 1424 256 81 6 chrX 57029101 57029642 -109620654 - L1MDb LINE L1 -4992 1548 967 4 1020 607 294 123 15 chrX 57029783 57030136 -109620160 - Lx8 LINE L1 -377 7319 6925 5 1020 3735 54 0 13 chrX 57030614 57031087 -109619209 + L1Md_F2 LINE L1 6116 6582 0 5 1020 2489 170 81 6 chrX 57031157 57031653 -109618643 - Lx5 LINE L1 -2 7048 6516 5 1020 200 378 20 10 chrX 57032334 57032433 -109617863 + L2 LINE L2 2871 2970 -449 5 1020 1472 231 124 21 chrX 57032499 57032879 -109617417 + MTD LTR MaLR 1 419 0 5 1020 216 213 21 0 chrX 57033493 57033540 -109616756 + T-rich Low_complexity Low_complexity 1 48 0 5 1020 207 0 0 0 chrX 57033624 57033647 -109616649 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 5 1020 342 294 62 106 chrX 57033876 57034196 -109616100 + L1M4b LINE L1 1344 1649 -5685 5 1020 456 161 0 0 chrX 57034541 57034622 -109615674 + T-rich Low_complexity Low_complexity 1 81 0 5 1020 4295 78 7 26 chrX 57034625 57035243 -109615053 - L1Md_F2 LINE L1 0 6582 5977 6 1020 2948 35 0 0 chrX 57035243 57035647 -109614649 + L1Md_F2 LINE L1 5543 5946 -636 6 1020 324 103 0 0 chrX 57035743 57035801 -109614495 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 1020 244 378 22 0 chrX 57036054 57036144 -109614152 - B4A SINE B4 -28 264 173 6 1020 512 120 0 0 chrX 57036161 57036236 -109614060 + ORR1B2 LTR MaLR 293 367 0 6 1020 275 324 74 102 chrX 57036683 57037113 -109613183 - RMER10A LTR ERVL -13 429 12 6 1020 2115 179 23 10 chrX 57037325 57037719 -109612577 + MTC LTR MaLR 9 407 -14 6 1020 511 286 46 107 chrX 57037852 57038048 -109612248 - B3A SINE B2 -11 184 1 6 1020 237 297 32 42 chrX 57038154 57038249 -109612047 + L3 LINE CR1 4298 4391 -98 6 1020 447 309 81 35 chrX 57038342 57038540 -109611756 - MamSINE1 SINE tRNA -60 230 24 6 1020 414 0 0 0 chrX 57038548 57038594 -109611702 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1020 1927 232 14 31 chrX 57039439 57039857 -109610439 + MTD LTR MaLR 1 411 -8 7 1020 539 216 78 50 chrX 57039946 57040087 -109610209 + B1F2 SINE Alu 5 149 0 7 1020 439 314 59 105 chrX 57040231 57040537 -109609759 - B4A SINE B4 0 292 1 7 1020 34205 34 1 0 chrX 57040570 57046881 -109603415 + L1Md_Gf LINE L1 1 5589 -297 7 1020 9078 2 0 0 chrX 57046881 57047877 -109602419 + L1Md_A LINE L1 5587 6582 0 7 1020 9881 24 0 0 chrX 57047877 57049082 -109601214 + L1Md_T LINE L1 4382 5586 -297 7 1020 9034 5 0 0 chrX 57049082 57050078 -109600218 + L1Md_T LINE L1 5587 6582 0 7 1020 207 0 0 0 chrX 57050097 57050120 -109600176 + (A)n Simple_repeat Simple_repeat 1 23 0 7 1020 23 0 0 0 chrX 57050908 57050931 -109599365 + AT_rich Low_complexity Low_complexity 1 23 0 7 1020 1278 53 6 6 chrX 57051089 57051260 -109599036 + L1Md_T LINE L1 6410 6580 -2 7 1020 1529 204 102 6 chrX 57051431 57051820 -109598476 - Lx4B LINE L1 -1 7057 6643 7 1020 1870 156 11 52 chrX 57051820 57052185 -109598111 + Lx4B LINE L1 6265 6614 -444 7 1020 295 343 21 85 chrX 57052636 57052824 -109597472 + MIRb SINE MIR 68 243 -25 8 1020 236 260 51 13 chrX 57053536 57053614 -109596682 + MIR SINE MIR 61 141 -121 8 1020 1423 252 45 12 chrX 57053621 57053958 -109596338 - MT2A LTR ERVL 0 533 186 8 1020 7572 79 45 16 chrX 57054005 57055096 -109595200 + Lx3_Mus LINE L1 5888 7009 0 8 1020 345 62 0 0 chrX 57055250 57055298 -109594998 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 1020 21 0 0 0 chrX 57055508 57055529 -109594767 + AT_rich Low_complexity Low_complexity 1 21 0 8 1020 231 297 0 45 chrX 57056008 57056075 -109594221 + AmnSINE1 SINE SINE 4 67 -508 8 1020 581 66 11 0 chrX 57056091 57056182 -109594114 + (CA)n Simple_repeat Simple_repeat 2 93 0 8 1020 431 306 163 0 chrX 57056370 57056541 -109593755 + MIRb SINE MIR 3 205 -63 8 1020 1276 71 0 11 chrX 57056541 57056726 -109593570 - L1Md_F2 LINE L1 0 6582 6400 8 1020 431 306 163 0 chrX 57056726 57056763 -109593533 + MIRb SINE MIR 206 244 -24 8 1020 236 300 91 95 chrX 57057056 57057266 -109593030 + RMER12 LTR ERVK 750 958 -364 9 1020 1125 242 116 39 chrX 57058382 57058717 -109591579 + MTE2b LTR MaLR 6 366 -13 9 1020 351 0 0 0 chrX 57060611 57060650 -109589646 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 9 1020 1477 182 9 19 chrX 57060671 57060990 -109589306 + Lx7 LINE L1 4980 5295 -585 9 1020 902 169 51 65 chrX 57060988 57061203 -109589093 + Lx6 LINE L1 7220 7431 -29 9 1020 207 0 0 0 chrX 57061213 57061236 -109589060 + (TA)n Simple_repeat Simple_repeat 2 24 0 9 1020 3538 23 0 0 chrX 57061236 57061632 -109588664 - MTA_Mm LTR MaLR 0 396 1 9 1020 578 143 8 0 chrX 57061632 57061765 -109588531 + (TA)n Simple_repeat Simple_repeat 1 134 0 9 1020 4047 199 76 14 chrX 57061765 57063145 -109587151 + Lx7 LINE L1 5293 6780 -916 9 1020 29 0 0 0 chrX 57063181 57063210 -109587086 + AT_rich Low_complexity Low_complexity 1 29 0 9 1020 1507 56 0 0 chrX 57063213 57063409 -109586887 - L1_Mus2 LINE L1 -1 6565 6370 9 1020 370 298 83 42 chrX 57063585 57063802 -109586494 + HERV16-int LTR ERVL 814 1039 -3957 1 1020 2069 180 54 8 chrX 57064610 57064997 -109585299 - MTC LTR MaLR -13 408 4 1 1020 884 119 0 0 chrX 57065118 57065244 -109585052 + B1_Mm SINE Alu 1 126 -21 1 1020 387 0 0 0 chrX 57065255 57065298 -109584998 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 1020 216 356 34 127 chrX 57066163 57066430 -109583866 + L3 LINE CR1 4101 4342 -147 1 1020 34 24 0 0 chrX 57066619 57066660 -109583636 + AT_rich Low_complexity Low_complexity 1 41 0 1 1020 328 311 117 44 chrX 57066778 57066985 -109583311 - MIRb SINE MIR -25 243 22 1 1020 2246 89 50 15 chrX 57067530 57067870 -109582426 + L1_Mus4 LINE L1 6281 6632 -4 1 1020 28 48 0 0 chrX 57068143 57068185 -109582111 + AT_rich Low_complexity Low_complexity 1 42 0 1 1020 1766 340 125 49 chrX 57068243 57069537 -109580759 + MTE-int LTR MaLR 120 1512 -68 1 1020 21 36 0 0 chrX 57071733 57071761 -109578535 + AT_rich Low_complexity Low_complexity 1 28 0 1 1020 14147 112 11 10 chrX 57071761 57071855 -109578441 + L1_Mus1 LINE L1 3632 3723 -2160 1 1020 3534 55 2 13 chrX 57071855 57072312 -109577984 + L1Md_F2 LINE L1 6131 6582 0 1 1020 14147 98 18 7 chrX 57072312 57075140 -109575156 + L1_Mus1 LINE L1 3724 6567 0 1 1020 262 0 0 0 chrX 57075165 57075195 -109575101 - L1_Mus2 LINE L1 -349 6217 6188 1 1020 706 284 37 0 chrX 57075205 57075423 -109574873 - Lx8 LINE L1 -1020 6453 6228 1 1020 914 306 35 23 chrX 57075796 57076065 -109574231 - Lx8 LINE L1 -1686 5958 5647 1 1020 531 0 0 0 chrX 57076065 57076124 -109574172 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1020 914 300 30 25 chrX 57076124 57076328 -109573968 - Lx8 LINE L1 -201 5646 5446 1 1020 748 288 117 11 chrX 57076362 57076636 -109573660 + Lx8 LINE L1 6555 6857 -616 1 1020 5859 150 43 26 chrX 57076652 57077914 -109572382 - Lx LINE L1 -4 6996 5672 1 1020 3702 80 0 8 chrX 57077914 57078417 -109571879 + L1Md_F2 LINE L1 6078 6576 -6 1 1020 10911 144 15 22 chrX 57078417 57079791 -109570505 - L1_Mm LINE L1 -203 5680 4307 1 1020 2196 63 7 16 chrX 57079791 57080125 -109570171 + L1Md_F2 LINE L1 6268 6582 0 1 1020 10911 144 15 22 chrX 57080125 57080788 -109569508 - L1_Mm LINE L1 -1577 4306 3656 1 1020 2040 36 4 4 chrX 57080788 57081038 -109569258 - L1Md_T LINE L1 0 6582 6333 1 1020 1094 128 21 0 chrX 57081068 57081256 -109569040 + L1_Mus3 LINE L1 6445 6636 -2 1 1020 7154 116 14 48 chrX 57081262 57081695 -109568601 + L1_Mus2 LINE L1 4670 5064 -819 1 1020 5300 5 0 0 chrX 57081695 57082281 -109568015 - L1Md_A LINE L1 0 6582 5997 1 1020 7154 116 14 48 chrX 57082281 57083086 -109567210 + L1_Mus2 LINE L1 5065 5868 -15 1 1020 207 0 0 0 chrX 57083086 57083109 -109567187 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1020 7154 68 16 11 chrX 57083109 57083468 -109566828 + L1_Mus2 LINE L1 5869 6225 -341 1 1020 4671 100 9 55 chrX 57083470 57084240 -109566056 + RMER17A LTR ERVK 1 735 -16 1 1020 2244 93 31 59 chrX 57084280 57084635 -109565661 + L1_Mus2 LINE L1 6219 6563 -3 1 1020 994 298 31 9 chrX 57084658 57084976 -109565320 + Lx8 LINE L1 7005 7329 -144 1 1020 743 263 111 0 chrX 57084998 57085169 -109565127 + B3 SINE B2 1 190 -26 1 1020 226 221 51 13 chrX 57085169 57085247 -109565049 + Lx8 LINE L1 7390 7470 -3 1 1020 384 22 0 0 chrX 57085365 57085410 -109564886 + (CATA)n Simple_repeat Simple_repeat 2 46 0 1 1020 219 69 0 0 chrX 57085450 57085479 -109564817 + (CATA)n Simple_repeat Simple_repeat 2 30 0 1 1020 351 0 0 0 chrX 57085541 57085580 -109564716 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 1020 369 0 0 0 chrX 57085580 57085620 -109564676 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1020 321 318 60 60 chrX 57085864 57086112 -109564184 - Charlie7 DNA MER1_type -782 1830 1583 1 1020 316 240 46 46 chrX 57086429 57086560 -109563736 - L1M1 LINE L1 -580 5723 5593 1 1020 3057 153 78 31 chrX 57086615 57087201 -109563095 - Lx4B LINE L1 -1 7057 6444 1 1020 258 191 0 45 chrX 57087198 57087264 -109563032 - L1M1 LINE L1 -700 5591 5529 1 1020 454 294 36 42 chrX 57087314 57087497 -109562799 - MER3 DNA MER1_type -59 150 2 1 1020 260 327 57 47 chrX 57087762 57087789 -109562507 - ID_B1 SINE B4 -113 111 5 1 1020 276 308 0 13 chrX 57087789 57087868 -109562428 - ID4 SINE ID -1 82 5 1 1020 191 320 26 26 chrX 57088743 57088820 -109561476 + MIR3 SINE MIR 111 187 -21 1 1020 3843 59 58 2 chrX 57089625 57089860 -109560436 - LTRIS2 LTR ERV1 0 564 327 1 1020 4512 39 0 13 chrX 57089860 57090409 -109559887 + L1Md_F3 LINE L1 6040 6581 -3 1 1020 3843 59 58 2 chrX 57090409 57090703 -109559593 - LTRIS2 LTR ERV1 -238 326 6 1 1020 214 352 11 11 chrX 57090751 57090843 -109559453 - MIRc SINE MIR -124 144 53 1 1020 7012 98 9 2 chrX 57091417 57092461 -109557835 - L1_Mus3 LINE L1 0 6638 5588 1 1020 10754 87 2 6 chrX 57092603 57095071 -109555225 + L1Md_F LINE L1 387 2845 -3038 1 1020 3237 48 2 29 chrX 57095066 57095513 -109554783 + L1Md_F2 LINE L1 5151 5585 -298 1 1020 7431 69 7 21 chrX 57095514 57096522 -109553774 + L1Md_F2 LINE L1 5587 6580 -2 1 1020 2463 77 6 3 chrX 57097006 57097345 -109552951 - L1_Mus3 LINE L1 -7 6631 6292 1 1020 567 0 0 0 chrX 57097822 57097885 -109552411 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1020 864 68 0 0 chrX 57098257 57098404 -109551892 - L1_Mus1 LINE L1 0 6567 6447 1 1020 1175 68 0 0 chrX 57098477 57098624 -109551672 - B1_Mus2 SINE Alu 0 147 1 1 1020 357 352 25 0 chrX 57098762 57098884 -109551412 - L1ME3B LINE L1 -162 6078 5954 1 1020 507 260 24 16 chrX 57098922 57099115 -109551181 + B3 SINE B2 1 194 -1 1 1020 278 217 87 0 chrX 57099650 57099719 -109550577 - L1M4 LINE L1 -5760 782 708 1 1020 22 35 0 0 chrX 57099932 57099961 -109550335 + AT_rich Low_complexity Low_complexity 1 29 0 1 1020 2522 74 53 6 chrX 57100044 57100399 -109549897 + L1_Mus2 LINE L1 6194 6565 -1 1 1020 4775 123 14 66 chrX 57100552 57101399 -109548897 + RLTR13B4 LTR ERVK 1 803 0 1 1020 21 36 0 0 chrX 57101451 57101479 -109548817 + AT_rich Low_complexity Low_complexity 1 28 0 1 1020 278 120 0 0 chrX 57101556 57101606 -109548690 + L1_Mm LINE L1 4009 4058 -1825 1 1020 4854 117 8 1 chrX 57101863 57102688 -109547608 + MusHAL1 LINE L1 1435 2265 -447 1 1020 877 65 0 0 chrX 57102688 57102812 -109547484 + L1_Mm LINE L1 5342 5465 -418 1 1020 33312 46 1 13 chrX 57102815 57107856 -109542440 + L1Md_T LINE L1 188 5286 -600 1 1020 304 0 0 0 chrX 57107856 57107891 -109542405 + U2 snRNA snRNA 1 35 -153 1 1020 33312 46 1 13 chrX 57107891 57108189 -109542107 + L1Md_T LINE L1 5287 5589 -297 1 1020 8428 34 0 0 chrX 57108189 57109185 -109541111 + L1Md_T LINE L1 5590 6585 0 1 1020 1088 105 6 24 chrX 57109185 57109326 -109540970 + L1_Mm LINE L1 5447 5586 -297 1 1020 8055 48 1 2 chrX 57109326 57110310 -109539986 + L1Md_F2 LINE L1 5588 6570 -12 1 1020 1088 105 6 24 chrX 57110310 57110334 -109539962 + L1_Mm LINE L1 5587 5609 -274 1 1020 7706 142 15 58 chrX 57110311 57111056 -109539240 + L1_Mm LINE L1 3454 4194 -1689 1 1020 639 0 0 0 chrX 57111056 57111127 -109539169 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 1020 7706 142 15 58 chrX 57111127 57111419 -109538877 + L1_Mm LINE L1 4195 4443 -1440 1 1020 5303 74 0 21 chrX 57111419 57112136 -109538160 + L1Md_F2 LINE L1 5869 6570 -12 1 1020 11283 129 11 43 chrX 57112136 57113496 -109536800 + L1_Mm LINE L1 4444 5781 -102 1 1020 32312 74 2 3 chrX 57113494 57119313 -109530983 - L1Md_F2 LINE L1 -4 6578 771 1 1020 2080 144 26 29 chrX 57120416 57120795 -109529501 - Lx LINE L1 -25 6629 6252 1 1020 511 302 23 66 chrX 57121028 57121333 -109528963 - L1M4 LINE L1 -6165 377 86 1 1020 25 0 0 0 chrX 57121513 57121538 -109528758 + AT_rich Low_complexity Low_complexity 1 25 0 1 1020 1263 6 19 0 chrX 57121597 57121753 -109528543 + (TAGA)n Simple_repeat Simple_repeat 4 162 0 1 1020 721 288 165 35 chrX 57121771 57122196 -109528100 - Lx9 LINE L1 -206 7438 6959 1 1020 615 260 62 35 chrX 57122399 57122658 -109527638 - L1MC4 LINE L1 -1082 6960 6695 1 1020 434 250 0 74 chrX 57122913 57123034 -109527262 + PB1D9 SINE Alu 2 113 -7 1 1020 701 265 67 30 chrX 57123045 57123236 -109527060 + Lx9 LINE L1 7292 7491 -153 1 1020 393 22 0 0 chrX 57123236 57123282 -109527014 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1020 701 265 67 30 chrX 57123282 57123390 -109526906 + Lx9 LINE L1 7492 7602 -42 1 1020 1399 69 167 5 chrX 57124072 57124276 -109526020 + L1_Mus2 LINE L1 6329 6565 -1 1 1020 25 0 0 0 chrX 57124282 57124307 -109525989 + AT_rich Low_complexity Low_complexity 1 25 0 1 1020 282 229 0 32 chrX 57124490 57124553 -109525743 - B3 SINE B2 -150 66 6 1 1020 507 45 0 0 chrX 57124835 57124901 -109525395 + (TC)n Simple_repeat Simple_repeat 1 66 0 1 1020 291 316 0 0 chrX 57124965 57125041 -109525255 - ID4_ SINE ID -7 76 1 1 1020 308 371 16 8 chrX 57125288 57125530 -109524766 - L1M5 LINE L1 -465 5659 5416 1 1020 506 311 146 0 chrX 57125913 57126064 -109524232 - B3A SINE B2 -25 173 1 1 1020 287 350 20 59 chrX 57126100 57126252 -109524044 - B3A SINE B2 0 198 53 1 1020 5191 113 33 22 chrX 57127035 57127848 -109522448 - Lx3B LINE L1 -1 6972 6151 1 1020 1504 108 0 0 chrX 57128404 57128618 -109521678 - RLTR11B LTR ERVK 0 453 240 1 1020 580 115 10 10 chrX 57128629 57128726 -109521570 - RLTR11B LTR ERVK 0 453 357 1 1020 1768 191 18 37 chrX 57128707 57129087 -109521209 + RLTR11A LTR ERVK 154 526 -2 1 1020 304 352 157 5 chrX 57129156 57129353 -109520943 - MIRb SINE MIR -15 253 27 1 1020 1756 117 28 24 chrX 57129780 57130070 -109520226 - Lx2 LINE L1 0 6997 6707 1 1020 692 266 19 61 chrX 57130250 57130462 -109519834 - B3 SINE B2 -12 204 2 1 1020 1175 294 117 18 chrX 57130475 57131243 -109519053 - L1MB2 LINE L1 -3 6168 5325 1 1020 21 0 0 0 chrX 57131291 57131312 -109518984 + AT_rich Low_complexity Low_complexity 1 21 0 1 1020 242 171 72 12 chrX 57131391 57131474 -109518822 - Lx9 LINE L1 -1 7643 7556 1 1020 356 275 114 16 chrX 57131604 57131859 -109518437 - L1M4 LINE L1 -982 5164 4885 1 1020 753 298 35 40 chrX 57131935 57132340 -109517956 + L1MA4A LINE L1 5526 5928 -375 1 1020 3233 70 7 2 chrX 57132545 57132976 -109517320 + L1_Mus2 LINE L1 6133 6565 -1 1 1020 21 0 0 0 chrX 57132976 57132997 -109517299 + AT_rich Low_complexity Low_complexity 1 21 0 1 1020 396 236 0 11 chrX 57133010 57133104 -109517192 + Lx5 LINE L1 6271 6363 -687 1 1020 853 256 75 14 chrX 57133105 57133319 -109516977 + Lx5 LINE L1 6479 6705 -345 1 1020 745 46 0 0 chrX 57133313 57133422 -109516874 + L1Md_A LINE L1 6474 6582 0 1 1020 897 276 67 26 chrX 57133427 57133769 -109516527 + Lx6 LINE L1 7079 7434 -26 1 1020 774 32 0 0 chrX 57133775 57133868 -109516428 + (GA)n Simple_repeat Simple_repeat 1 93 0 1 1020 318 345 59 10 chrX 57133910 57134112 -109516184 - L3 LINE CR1 -2304 2185 1974 1 1020 5003 62 20 0 chrX 57135680 57136327 -109513969 - L1Md_F3 LINE L1 0 6584 5925 2 1020 369 125 0 0 chrX 57136356 57136420 -109513876 - L1Md_F2 LINE L1 -12 6570 6507 2 1020 32569 79 3 4 chrX 57136459 57141842 -109508454 - L1Md_F2 LINE L1 0 6582 1204 2 1020 1017 295 11 45 chrX 57141842 57142194 -109508102 + RLTR20B3 LTR ERVK 182 521 -56 2 1020 1437 251 147 25 chrX 57142230 57143005 -109507291 + L1_Rod LINE L1 2002 2871 -2976 2 1020 386 250 49 24 chrX 57142999 57143122 -109507174 + L1_Rod LINE L1 4070 4195 -1652 2 1020 623 209 102 22 chrX 57143132 57143254 -109507042 + B1_Mus1 SINE Alu 1 136 -12 2 1020 1167 109 0 0 chrX 57143254 57143428 -109506868 + (GAAA)n Simple_repeat Simple_repeat 3 176 0 2 1020 623 209 102 22 chrX 57143428 57143442 -109506854 + B1_Mus1 SINE Alu 137 148 0 2 1020 790 243 41 57 chrX 57143462 57143776 -109506520 + L1_Mur3 LINE L1 4209 4517 -1363 2 1020 457 255 20 13 chrX 57143813 57143964 -109506332 + Lx6 LINE L1 7305 7456 -4 2 1020 1927 240 83 23 chrX 57143931 57144723 -109505573 + L1_Rod LINE L1 4465 5304 -543 2 1020 2672 86 0 2 chrX 57144742 57145139 -109505157 + L1_Mus2 LINE L1 4052 4447 -1436 2 1020 3535 50 2 0 chrX 57145133 57145577 -109504719 + L1Md_F2 LINE L1 6063 6507 -75 2 1020 8150 152 4 3 chrX 57145575 57147023 -109503273 + L1_Mus2 LINE L1 4430 5878 -5 2 127 4226 32 6 4 chrX 57147040 57147546 -109502750 + L1Md_F3 LINE L1 6077 6583 -1 2 1021 260 164 0 76 chrX 57147546 57147594 -109502702 + L1_Mus2 LINE L1 5866 5909 -657 2 1021 4475 100 26 2 chrX 57147594 57148237 -109502059 + L1_Mus3 LINE L1 5980 6638 0 2 1021 260 164 0 76 chrX 57148237 57148254 -109502042 + L1_Mus2 LINE L1 5910 5926 -640 2 1021 1733 92 0 0 chrX 57148245 57148495 -109501801 + L1_Mus3 LINE L1 5588 5837 -801 2 1021 2525 110 8 8 chrX 57148495 57148881 -109501415 + L1_Mus3 LINE L1 6253 6638 0 2 1021 471 213 26 13 chrX 57148936 57149088 -109501208 - L1MB7 LINE L1 0 6184 6031 2 1021 988 261 5 0 chrX 57149180 57149375 -109500921 - B3 SINE B2 -12 204 9 2 1021 298 276 38 0 chrX 57149395 57149500 -109500796 - L1MB7 LINE L1 -222 5956 5848 2 1021 242 272 54 0 chrX 57149497 57149589 -109500707 - L1MC LINE L1 -2244 5541 5445 2 1021 270 140 53 0 chrX 57149629 57149686 -109500610 - L1M4 LINE L1 -1454 4692 4633 2 1021 222 308 0 30 chrX 57149751 57149818 -109500478 - L2b LINE L2 -15 3360 3296 2 1021 339 337 53 103 chrX 57149829 57150206 -109500090 - L1M5 LINE L1 -3519 2627 2270 2 1021 303 396 45 57 chrX 57150337 57150602 -109499694 + MLT1J LTR MaLR 2 263 -249 2 1021 522 0 0 0 chrX 57151071 57151129 -109499167 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 1021 258 105 0 0 chrX 57151130 57151168 -109499128 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 1021 4167 221 52 25 chrX 57151190 57151315 -109498981 - Lx7 LINE L1 -19 7677 7526 2 1021 2056 95 41 0 chrX 57151315 57151609 -109498687 + Lx3C LINE L1 6664 6969 -7 2 1021 4167 221 52 25 chrX 57151609 57151703 -109498593 - Lx7 LINE L1 -171 7525 7426 2 1021 243 0 0 0 chrX 57151703 57151730 -109498566 + (CCA)n Simple_repeat Simple_repeat 3 29 0 2 1021 4167 221 52 25 chrX 57151730 57152610 -109497686 - Lx7 LINE L1 -271 7425 6549 2 1021 1760 140 19 0 chrX 57152888 57153195 -109497101 + Lx2 LINE L1 6109 6421 -576 2 1021 2296 231 77 20 chrX 57153208 57154093 -109496203 + Lx5 LINE L1 6011 6975 -25 2 1021 211 85 43 0 chrX 57155135 57155182 -109495114 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1021 205 305 0 0 chrX 57155227 57155286 -109495010 + CT-rich Low_complexity Low_complexity 2 60 0 2 1021 330 224 215 13 chrX 57155344 57155493 -109494803 - L1MA4 LINE L1 -250 5918 5740 2 1021 1069 115 0 0 chrX 57155506 57155654 -109494642 + B1_Mus1 SINE Alu 1 148 0 2 1021 7060 116 29 14 chrX 57155849 57155968 -109494328 - Lx2 LINE L1 0 6997 6884 2 1021 189 0 0 0 chrX 57155968 57155989 -109494307 + (CCCA)n Simple_repeat Simple_repeat 1 21 0 2 1021 7060 116 29 14 chrX 57155989 57156973 -109493323 - Lx2 LINE L1 -114 6883 5880 2 1021 715 204 141 26 chrX 57156973 57157010 -109493286 - B3 SINE B2 0 216 176 2 1021 624 14 0 0 chrX 57157010 57157083 -109493213 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 1021 715 204 141 26 chrX 57157083 57157236 -109493060 - B3 SINE B2 -41 175 5 2 1021 541 324 118 24 chrX 57157291 57157715 -109492581 - MLT1C LTR MaLR -1 466 3 2 1021 350 336 101 90 chrX 57159356 57159823 -109490473 - L2 LINE L2 -474 2945 2474 2 1021 808 189 16 42 chrX 57159862 57160055 -109490241 + L1Md_F2 LINE L1 6383 6570 -12 2 1021 481 79 0 0 chrX 57160055 57160118 -109490178 - L1_Mus2 LINE L1 -151 6415 6353 2 1021 364 346 40 81 chrX 57160209 57160505 -109489791 - L2 LINE L2 -1102 2317 2034 2 1021 646 321 90 33 chrX 57160534 57160866 -109489430 - ORR1E LTR MaLR -8 351 1 2 1021 785 360 123 19 chrX 57160866 57161614 -109488682 - L2 LINE L2 -1487 1932 1107 2 1021 803 227 72 72 chrX 57161630 57161759 -109488537 + MTD LTR MaLR 1 126 -293 2 1021 4314 180 48 14 chrX 57161759 57162584 -109487712 - Lx5 LINE L1 -1 7049 6197 2 1021 803 227 72 72 chrX 57162584 57162663 -109487633 + MTD LTR MaLR 127 209 -210 2 1021 1022 81 25 6 chrX 57162665 57162826 -109487470 + L1_Mus3 LINE L1 6468 6631 -7 2 1021 956 148 6 0 chrX 57162835 57163004 -109487292 + GA-rich Low_complexity Low_complexity 1 170 0 2 1021 984 207 5 81 chrX 57163005 57163226 -109487070 + MTD LTR MaLR 197 400 -19 2 1021 254 304 11 11 chrX 57163264 57163357 -109486939 + Lx8 LINE L1 6257 6349 -1124 2 1021 428 188 12 0 chrX 57163371 57163451 -109486845 + MTD LTR MaLR 337 417 -2 2 1021 479 17 17 0 chrX 57163742 57163802 -109486494 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1021 617 261 133 0 chrX 57164033 57164244 -109486052 + Lx8 LINE L1 6589 6827 -646 2 1021 752 172 24 0 chrX 57164495 57164664 -109485632 + GA-rich Low_complexity Low_complexity 3 175 0 2 1021 261 0 0 0 chrX 57164664 57164693 -109485603 + (GAGAA)n Simple_repeat Simple_repeat 2 30 0 2 1021 878 278 19 5 chrX 57165195 57165408 -109484888 + B3 SINE B2 1 216 0 2 1021 226 260 109 10 chrX 57165559 57165660 -109484636 - Lx8 LINE L1 -9 7464 7354 2 1021 905 263 81 65 chrX 57165661 57166170 -109484126 + HAL1b LINE L1 1132 1648 -361 2 1021 787 303 27 34 chrX 57166405 57166699 -109483597 + B4A SINE B4 1 292 0 2 1021 770 275 39 15 chrX 57166757 57166960 -109483336 + B3 SINE B2 1 208 -8 2 1021 21 57 0 0 chrX 57166968 57167003 -109483293 + AT_rich Low_complexity Low_complexity 1 35 0 2 1021 834 123 0 0 chrX 57167964 57168126 -109482170 + (TC)n Simple_repeat Simple_repeat 2 163 0 2 1021 503 316 77 59 chrX 57168155 57168377 -109481919 - B4 SINE B4 -2 290 65 2 1021 253 261 0 28 chrX 57168379 57168450 -109481846 - Lx6 LINE L1 -317 7143 7075 2 1021 2940 127 49 4 chrX 57168447 57168963 -109481333 + Lx2A LINE L1 6198 6754 -254 2 1021 2429 80 3 6 chrX 57168963 57169291 -109481005 + L1_Mus1 LINE L1 6240 6566 -1 2 1021 1408 92 57 9 chrX 57169313 57169543 -109480753 + Lx2A LINE L1 6759 6999 -9 2 1021 237 65 0 0 chrX 57169543 57169574 -109480722 + (TAAG)n Simple_repeat Simple_repeat 1 31 0 2 1021 836 292 29 9 chrX 57169580 57169925 -109480371 + Lx5 LINE L1 6455 6894 -566 2 1021 387 295 26 148 chrX 57170047 57170083 -109480213 + B3 SINE B2 5 40 -176 2 1021 332 324 0 57 chrX 57170083 57170240 -109480056 + B1_Mur1 SINE Alu 1 148 -1 2 1021 417 301 26 115 chrX 57170240 57170413 -109479883 + B3A SINE B2 39 192 -6 2 1021 269 367 50 7 chrX 57170422 57170699 -109479597 - L1MC4a LINE L1 -1718 6164 5876 2 1021 401 296 20 20 chrX 57170737 57170837 -109479459 - RSINE1 SINE B4 -1 164 65 2 1021 7779 42 3 2 chrX 57171309 57172588 -109477708 - L1Md_F2 LINE L1 0 6582 5306 2 1021 3418 111 158 0 chrX 57172914 57173010 -109477286 - Lx LINE L1 -7 6647 6520 2 1021 207 0 0 0 chrX 57173010 57173033 -109477263 + (CCCA)n Simple_repeat Simple_repeat 3 25 0 2 1021 3418 111 158 0 chrX 57173033 57173558 -109476738 - Lx LINE L1 -135 6519 5929 2 1021 2762 155 26 2 chrX 57173555 57174059 -109476237 + L1_Mur2 LINE L1 4688 5203 -674 2 1021 601 282 105 11 chrX 57174483 57174673 -109475623 + B3 SINE B2 3 210 -6 2 1021 432 51 0 0 chrX 57174685 57174744 -109475552 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 1021 452 318 144 95 chrX 57176119 57176383 -109473913 - B4A SINE B4 0 292 16 2 1021 27 0 0 0 chrX 57176605 57176632 -109473664 + AT_rich Low_complexity Low_complexity 1 27 0 2 1021 240 286 0 103 chrX 57176656 57176734 -109473562 + B1F SINE Alu 74 143 -6 2 1021 1796 158 89 9 chrX 57176881 57177207 -109473089 + ORR1B2 LTR MaLR 1 352 -15 2 1021 294 29 0 0 chrX 57177220 57177255 -109473041 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 2 1021 3567 273 78 21 chrX 57177262 57178072 -109472224 + Lx8 LINE L1 6205 7064 -409 2 1021 387 0 0 0 chrX 57178072 57178115 -109472181 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1021 180 0 0 0 chrX 57178115 57178134 -109472162 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 1021 3567 273 78 21 chrX 57178134 57178519 -109471777 + Lx8 LINE L1 7065 7469 -4 2 1021 836 221 0 0 chrX 57178532 57178681 -109471615 - B1_Mur1 SINE Alu 0 149 1 2 1021 535 236 0 0 chrX 57178835 57178941 -109471355 + MTC LTR MaLR 1 106 -290 2 1021 4392 125 0 10 chrX 57178978 57179251 -109471045 - L1_Mus4 LINE L1 -1 6635 6369 2 1021 3375 40 2 0 chrX 57179251 57179646 -109470650 - MTA_Mm LTR MaLR 0 396 1 2 1021 4392 125 0 10 chrX 57179646 57180049 -109470247 - L1_Mus4 LINE L1 -268 6368 5966 2 1021 4552 149 25 14 chrX 57180049 57180878 -109469418 + L1_Mus4 LINE L1 5044 5881 -2 2 1021 407 154 0 0 chrX 57180888 57180953 -109469343 + MTC LTR MaLR 106 170 -251 2 1021 2001 136 51 0 chrX 57180953 57181307 -109468989 - BGLII_Mus LTR ERVK 0 422 51 2 1021 654 154 220 7 chrX 57181303 57181453 -109468843 + MTC LTR MaLR 230 411 -10 2 1021 32525 56 2 68 chrX 57181955 57187884 -109462412 + L1Md_A LINE L1 98 5586 -297 2 1021 8365 37 1 0 chrX 57187884 57188879 -109461417 + L1Md_A LINE L1 5587 6582 0 2 1021 23 33 0 0 chrX 57188936 57188966 -109461330 + AT_rich Low_complexity Low_complexity 1 30 0 2 1021 182 139 27 27 chrX 57189136 57189173 -109461123 + L2 LINE L2 1980 2016 -1403 2 1021 302 0 26 0 chrX 57189493 57189531 -109460765 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2 1021 245 336 0 59 chrX 57189911 57190005 -109460291 - MIRb SINE MIR -141 127 33 2 1021 222 156 0 0 chrX 57190554 57190599 -109459697 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1021 275 185 247 35 chrX 57191219 57191393 -109458903 - L1MA9 LINE L1 -7 6305 6095 2 1021 1209 46 0 0 chrX 57191395 57191546 -109458750 + L1Md_F2 LINE L1 5436 5586 -297 2 1021 7452 67 12 17 chrX 57191546 57192534 -109457762 + L1Md_F2 LINE L1 5587 6569 -13 2 1021 490 275 45 0 chrX 57192535 57192735 -109457561 - L1MA9 LINE L1 -209 6103 5895 2 1021 7967 105 16 38 chrX 57192868 57194095 -109456201 + L1Md_A LINE L1 399 1584 -4299 2 1021 1477 73 5 0 chrX 57194095 57194287 -109456009 + B2_Mm2 SINE B2 2 194 -1 2 1021 7967 48 25 24 chrX 57194287 57195085 -109455211 + L1Md_A LINE L1 1585 2394 -3489 2 1021 253 264 54 141 chrX 57195983 57196168 -109454128 + MIR3 SINE MIR 37 205 -3 2 1021 285 328 77 62 chrX 57196372 57196567 -109453729 + LTR85a LTR Gypsy? 32 229 -473 2 1021 3733 71 19 0 chrX 57196601 57197081 -109453215 + L1_Mus1 LINE L1 6079 6567 0 2 1021 267 279 47 28 chrX 57197161 57197268 -109453028 + MER53 DNA hAT 7 115 -78 2 1021 977 163 11 0 chrX 57197277 57197455 -109452841 + Lx3B LINE L1 6793 6972 -1 3 1021 2208 48 0 0 chrX 57197673 57197944 -109452352 + L1Md_A LINE L1 6310 6580 -2 3 1021 3238 149 15 25 chrX 57198497 57199088 -109451208 + RMER4B LTR ERVK 1 585 0 3 1021 542 83 24 0 chrX 57199162 57199246 -109451050 + (TCTCC)n Simple_repeat Simple_repeat 1 86 0 3 1021 333 316 0 0 chrX 57200752 57200828 -109449468 - ID4 SINE ID -6 77 2 3 1021 282 338 97 56 chrX 57200978 57201122 -109449174 - B4A SINE B4 -131 161 12 3 1021 779 263 9 28 chrX 57201199 57201414 -109448882 - MLT1B LTR MaLR -175 215 5 3 1021 523 341 119 50 chrX 57204599 57205035 -109445261 - MLT1C LTR MaLR -1 466 1 3 1021 623 345 92 65 chrX 57205048 57205143 -109445153 + B4A SINE B4 2 84 -208 3 1021 462 36 0 0 chrX 57205143 57205199 -109445097 + (TAA)n Simple_repeat Simple_repeat 2 57 0 3 1021 623 336 98 42 chrX 57205199 57205391 -109444905 + B4A SINE B4 85 289 -3 3 1021 536 77 13 0 chrX 57205419 57205497 -109444799 + (GA)n Simple_repeat Simple_repeat 2 80 0 3 1021 733 198 24 39 chrX 57205656 57205861 -109444435 - Lx9 LINE L1 -6 7638 7437 3 1021 423 0 0 0 chrX 57207479 57207526 -109442770 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 1021 204 333 75 50 chrX 57207528 57207648 -109442648 + L2a LINE L2 2141 2263 -1156 3 1021 480 345 139 40 chrX 57207904 57208675 -109441621 + L2a LINE L2 2577 3426 0 3 1021 895 242 15 0 chrX 57208718 57208916 -109441380 + B3 SINE B2 1 201 -15 3 1021 1948 272 6 36 chrX 57210982 57211606 -109438690 + Lx5 LINE L1 6457 7035 -15 3 1021 22 0 0 0 chrX 57212000 57212022 -109438274 + AT_rich Low_complexity Low_complexity 1 22 0 3 1021 315 292 58 0 chrX 57212025 57212145 -109438151 + L1MEg LINE L1 1857 1983 -4259 3 1021 773 176 53 0 chrX 57212146 57212277 -109438019 + B1_Mus1 SINE Alu 3 140 -8 3 1021 283 238 89 67 chrX 57212450 57212585 -109437711 + L1MEg LINE L1 4688 4825 -1321 3 1021 281 247 54 33 chrX 57212582 57212674 -109437622 + L1MEg LINE L1 5576 5669 -515 3 1021 676 273 73 0 chrX 57212694 57212844 -109437452 + RSINE1 SINE B4 1 161 -4 3 1021 298 239 41 27 chrX 57213037 57213110 -109437186 - ID SINE ID -144 80 7 3 1021 596 168 89 121 chrX 57213540 57213730 -109436566 + B2_Mm2 SINE B2 2 185 -10 3 1021 1017 230 134 4 chrX 57213741 57214016 -109436280 + Lx5 LINE L1 6737 7047 -3 3 1021 345 323 94 0 chrX 57214411 57214538 -109435758 + MIRb SINE MIR 15 153 -115 3 1021 252 366 60 30 chrX 57214850 57215016 -109435280 + MIRb SINE MIR 52 222 -46 3 1021 907 209 44 6 chrX 57215712 57215895 -109434401 + B3 SINE B2 1 190 -26 3 1021 690 300 10 5 chrX 57215901 57216102 -109434194 + Lx7 LINE L1 6984 7185 -511 3 1021 610 202 0 18 chrX 57216110 57216221 -109434075 + PB1D9 SINE Alu 3 111 -9 3 1021 968 154 0 6 chrX 57216222 57216398 -109433898 + GA-rich Low_complexity Low_complexity 1 175 0 3 1021 391 326 0 0 chrX 57216448 57216592 -109433704 + Lx7 LINE L1 7175 7318 -378 3 1021 274 253 18 102 chrX 57216593 57216760 -109433536 + Lx7 LINE L1 7534 7686 -10 3 1021 4895 204 68 19 chrX 57216819 57217966 -109432330 - Lx9 LINE L1 -17 7627 6425 3 1021 3545 69 0 0 chrX 57217961 57218440 -109431856 - L1_Mus3 LINE L1 -213 6425 5947 3 1021 1279 96 86 0 chrX 57218442 57218640 -109431656 + L1_Mus3 LINE L1 6418 6632 -6 3 1021 556 242 174 21 chrX 57218700 57218936 -109431360 - Lx9 LINE L1 -1205 6439 6168 3 1021 2171 168 53 0 chrX 57218971 57219351 -109430945 - Lx5 LINE L1 -4 7046 6647 3 1021 2629 152 36 133 chrX 57219423 57219627 -109430669 + Lx5 LINE L1 5173 5327 -550 3 1021 2717 55 41 0 chrX 57219627 57219972 -109430324 - L1_Mus1 LINE L1 0 6567 6209 3 1021 2629 152 36 133 chrX 57219972 57220452 -109429844 + Lx5 LINE L1 5328 5791 -86 3 1021 1236 101 16 3 chrX 57220453 57220641 -109429655 + B2_Mm2 SINE B2 1 207 -9 3 1021 5042 188 53 30 chrX 57220641 57221741 -109428555 + Lx5 LINE L1 5805 6929 -121 3 1021 281 270 42 57 chrX 57221744 57221882 -109428414 - RLTR8 LTR ERVK 0 365 228 3 1021 2949 84 0 58 chrX 57221993 57222424 -109427872 - L1Md_F2 LINE L1 -12 6570 6165 3 1021 4394 51 3 0 chrX 57222424 57223104 -109427192 + L1Md_F2 LINE L1 5472 6153 -429 3 1021 414 0 0 0 chrX 57223347 57223393 -109426903 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 3 1021 30 27 0 0 chrX 57223410 57223447 -109426849 + AT_rich Low_complexity Low_complexity 1 37 0 3 1021 285 259 66 26 chrX 57223451 57223602 -109426694 + L1MA6 LINE L1 6144 6300 0 3 1021 490 202 70 9 chrX 57223622 57223737 -109426559 - MTD LTR MaLR -2 417 296 3 1021 7659 101 50 8 chrX 57223737 57224749 -109425547 + Lx4A LINE L1 4590 5649 -228 3 1021 2639 78 35 107 chrX 57224749 57225180 -109425116 + MTB LTR MaLR 1 400 0 3 1021 7659 111 35 14 chrX 57225180 57226116 -109424180 + Lx4A LINE L1 5650 6609 -449 3 1021 4531 107 8 3 chrX 57226123 57226762 -109423534 - Lx2 LINE L1 -1 6996 6355 3 1021 3000 145 2 2 chrX 57226765 57227220 -109423076 + Lx4A LINE L1 6597 7051 -7 3 1021 225 326 47 0 chrX 57227410 57227582 -109422714 + L1MDa LINE L1 2236 2415 -4218 3 1021 755 280 191 3 chrX 57228099 57228382 -109421914 - MTD LTR MaLR 0 419 84 3 1021 1022 132 0 11 chrX 57228390 57228566 -109421730 - L1Md_F2 LINE L1 -11 6571 6398 3 1021 18220 102 39 6 chrX 57228566 57232033 -109418263 - L1Md_F LINE L1 -1943 3940 98 3 1021 10191 57 3 6 chrX 57232034 57233443 -109416853 - L1_Mm LINE L1 -1651 4232 2829 3 1021 1853 196 40 11 chrX 57233446 57233901 -109416395 - L1Md_A LINE L1 -5846 878 411 3 1021 263 264 47 0 chrX 57233903 57234009 -109416287 + L1_Mur3 LINE L1 4605 4715 -1165 3 1021 378 42 0 0 chrX 57234028 57234076 -109416220 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1021 854 185 0 11 chrX 57234191 57234371 -109415925 + GA-rich Low_complexity Low_complexity 3 180 0 3 1021 209 59 59 0 chrX 57234364 57234398 -109415898 + (GGAAA)n Simple_repeat Simple_repeat 4 39 0 3 1021 495 260 23 8 chrX 57234400 57234528 -109415768 + B1F1 SINE Alu 10 139 -10 3 1021 1180 58 116 0 chrX 57234533 57234705 -109415591 - B2_Mm2 SINE B2 -1 194 3 3 1021 400 300 73 36 chrX 57234903 57235045 -109415251 + L1MDa LINE L1 4405 4559 -1978 3 1021 249 33 0 0 chrX 57235045 57235075 -109415221 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 1021 400 300 73 36 chrX 57235075 57235233 -109415063 + L1MDa LINE L1 4560 4715 -1822 3 1021 516 216 41 57 chrX 57235238 57235361 -109414935 + MTEa LTR MaLR 207 327 -52 3 1021 1099 254 57 20 chrX 57235425 57235830 -109414466 + L1MC LINE L1 4256 4675 -1471 3 1021 808 263 19 34 chrX 57236121 57236326 -109413970 + B4A SINE B4 83 284 -8 3 1021 405 292 68 33 chrX 57236542 57236956 -109413340 + L1MEf LINE L1 1584 2007 -4393 3 1021 701 254 74 11 chrX 57236989 57237164 -109413132 + B3 SINE B2 28 213 -3 3 1021 8671 204 52 38 chrX 57237229 57237383 -109412913 - Lx7 LINE L1 -3 7693 7522 3 1021 240 35 0 0 chrX 57237383 57237412 -109412884 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1021 8671 192 49 30 chrX 57237412 57239578 -109410718 - Lx7 LINE L1 -175 7521 5336 3 1021 466 162 39 48 chrX 57239578 57239682 -109410614 - Lx7 LINE L1 -663 5217 5115 3 1021 4667 79 5 9 chrX 57239694 57240331 -109409965 + L1_Mus2 LINE L1 5933 6566 0 3 1021 13317 74 24 7 chrX 57240925 57243577 -109406719 - L1VL2 LINE L1 -632 2983 284 3 1021 2010 167 29 19 chrX 57243585 57244001 -109406295 - Lx7 LINE L1 -862 5018 4599 3 1021 1190 62 0 0 chrX 57244325 57244470 -109405826 + B1_Mm SINE Alu 1 145 -2 3 1021 507 33 0 0 chrX 57244470 57244531 -109405765 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 3 1021 3897 177 47 62 chrX 57244788 57244986 -109405310 - Lx7 LINE L1 -1270 4610 4422 3 1021 317 22 44 0 chrX 57244986 57245031 -109405265 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 3 1021 3897 177 47 62 chrX 57245031 57245857 -109404439 - Lx7 LINE L1 -1459 4421 3601 3 1021 3882 186 77 3 chrX 57245853 57247363 -109402933 - Lx7 LINE L1 -3956 1924 298 3 1021 549 300 8 0 chrX 57247403 57247533 -109402763 - B1_Mur1 SINE Alu -3 146 16 3 1021 480 33 0 0 chrX 57248266 57248326 -109401970 + Lx4B LINE L1 6460 6519 -539 3 1021 226 321 94 12 chrX 57248372 57248457 -109401839 + Charlie4a DNA MER1_type 417 508 0 3 1021 1507 48 21 0 chrX 57248502 57248688 -109401608 - B2_Mm1t SINE B2 -2 191 2 3 1021 301 256 63 13 chrX 57248731 57248889 -109401407 + L1MB2 LINE L1 5900 6065 -106 3 1021 4170 149 25 6 chrX 57248901 57249615 -109400681 + L1VL4 LINE L1 6 733 -5569 3 1021 7367 86 14 10 chrX 57249615 57250804 -109399492 + L1_Mus4 LINE L1 5439 6635 -1 3 1021 22 35 0 0 chrX 57250817 57250846 -109399450 + AT_rich Low_complexity Low_complexity 1 29 0 3 1021 235 204 0 0 chrX 57250870 57250924 -109399372 + L1MB2 LINE L1 6111 6164 -7 3 1021 213 146 24 24 chrX 57251719 57251761 -109398535 - MIR SINE MIR -102 160 119 3 1021 22 35 0 0 chrX 57251842 57251871 -109398425 + AT_rich Low_complexity Low_complexity 1 29 0 3 1021 632 10 37 28 chrX 57252026 57252134 -109398162 + (TTTTG)n Simple_repeat Simple_repeat 2 110 0 3 1021 1115 37 0 7 chrX 57252134 57252271 -109398025 - B1_Mm SINE Alu -10 137 2 3 1021 1120 104 0 11 chrX 57252274 57252459 -109397837 - L1_Mus4 LINE L1 -1 6635 6453 3 1021 536 298 16 0 chrX 57254497 57254618 -109395678 + RSINE1 SINE B4 13 135 -30 3 1021 224 324 0 0 chrX 57254630 57254698 -109395598 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 1021 1862 186 77 28 chrX 57254700 57255088 -109395208 - MTD LTR MaLR -8 411 5 3 1021 750 23 0 0 chrX 57255089 57255177 -109395119 + (CA)n Simple_repeat Simple_repeat 2 89 0 3 1021 201 384 0 23 chrX 57256017 57256105 -109394191 - MIRc SINE MIR -113 155 70 3 1021 386 127 0 14 chrX 57256471 57256543 -109393753 + (TCCC)n Simple_repeat Simple_repeat 3 73 0 3 1021 402 302 32 5 chrX 57257254 57257423 -109392873 + B3 SINE B2 1 211 -5 3 1021 455 252 122 0 chrX 57259002 57259133 -109391163 - MTD LTR MaLR -261 158 12 3 1021 1479 268 76 74 chrX 57259199 57259327 -109390969 - Lx9 LINE L1 -196 7448 7343 3 1021 716 42 10 0 chrX 57259327 57259423 -109390873 + (TTCC)n Simple_repeat Simple_repeat 1 97 0 3 1021 1479 268 76 74 chrX 57259423 57259887 -109390409 - Lx9 LINE L1 -302 7342 6855 3 1021 23 0 0 0 chrX 57260092 57260115 -109390181 + AT_rich Low_complexity Low_complexity 1 23 0 3 1021 307 319 19 106 chrX 57260131 57260292 -109390004 + B1F2 SINE Alu 1 147 -2 3 1021 411 21 0 0 chrX 57260329 57260377 -109389919 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1021 440 105 0 13 chrX 57260378 57260455 -109389841 + (GA)n Simple_repeat Simple_repeat 1 76 0 3 1021 266 224 12 0 chrX 57260513 57260598 -109389698 + (CCCCAG)n Simple_repeat Simple_repeat 6 91 0 3 1021 275 368 38 38 chrX 57260904 57260934 -109389362 - MIRb SINE MIR -7 261 233 3 1021 853 44 0 0 chrX 57260934 57261048 -109389248 - L1_Mus2 LINE L1 -1 6565 6452 3 1021 291 296 135 46 chrX 57261048 57261250 -109389046 - MIRc SINE MIR -34 234 21 3 1021 297 0 0 0 chrX 57261293 57261326 -109388970 + (TTG)n Simple_repeat Simple_repeat 1 33 0 3 1021 432 0 0 0 chrX 57261326 57261374 -109388922 + (TTC)n Simple_repeat Simple_repeat 1 48 0 4 1021 912 272 9 5 chrX 57261385 57261599 -109388697 - B3 SINE B2 0 216 2 4 1021 189 294 106 21 chrX 57263464 57263558 -109386738 - MIR SINE MIR -39 223 122 4 1021 1070 201 45 15 chrX 57264638 57264840 -109385456 + B3 SINE B2 9 216 0 4 1021 22 35 0 0 chrX 57264840 57264869 -109385427 + AT_rich Low_complexity Low_complexity 1 29 0 4 1021 8316 79 14 1 chrX 57264879 57265994 -109384302 - Lx3_Mus LINE L1 -9 7000 5871 4 1021 2622 58 0 14 chrX 57265994 57266363 -109383933 + L1_Mur1 LINE L1 4367 4730 -1156 4 1021 802 274 29 0 chrX 57266363 57266567 -109383729 - B3 SINE B2 -5 211 2 4 1021 189 0 0 0 chrX 57268491 57268512 -109381784 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 4 1021 1104 54 7 0 chrX 57268541 57268690 -109381606 - L1_Mus2 LINE L1 0 6566 6417 4 1021 397 277 148 48 chrX 57268702 57269074 -109381222 + L1ME3A LINE L1 5754 6162 -11 4 1021 189 107 0 0 chrX 57269308 57269336 -109380960 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 4 1021 221 98 24 0 chrX 57269581 57269622 -109380674 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 4 1021 294 345 26 52 chrX 57269802 57269918 -109380378 - B3 SINE B2 -34 182 70 4 1021 450 284 119 36 chrX 57270654 57270822 -109379474 + B4A SINE B4 109 290 -2 4 1021 34 0 0 0 chrX 57271967 57272001 -109378295 + AT_rich Low_complexity Low_complexity 1 34 0 4 1021 495 102 0 0 chrX 57272633 57272721 -109377575 + (TCTCTG)n Simple_repeat Simple_repeat 3 90 0 4 1021 525 16 0 0 chrX 57272721 57272782 -109377514 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 1021 429 281 54 42 chrX 57272946 57273113 -109377183 + MER5A DNA MER1_type 21 189 0 4 1021 504 292 34 23 chrX 57273384 57273559 -109376737 - MER3 DNA MER1_type -30 179 3 4 1021 1341 207 135 9 chrX 57274224 57274550 -109375746 - ORR1D2 LTR MaLR -3 367 1 4 1021 555 240 176 6 chrX 57275051 57275227 -109375069 - B3 SINE B2 -6 210 5 4 1021 238 300 29 0 chrX 57275575 57275645 -109374651 + ID4_ SINE ID 1 72 -11 4 1021 414 39 0 0 chrX 57275647 57275699 -109374597 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1021 703 177 41 34 chrX 57276891 57277037 -109373259 + B1_Mur2 SINE Alu 3 149 0 4 127 677 384 105 67 chrX 57278302 57279093 -109371203 + MER45C DNA Tip100 122 942 -11 4 1022 228 35 0 0 chrX 57279371 57279400 -109370896 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1022 707 294 0 0 chrX 57279403 57279546 -109370750 - RSINE1 SINE B4 -18 147 5 4 1022 4051 59 18 0 chrX 57280128 57280640 -109369656 - L1_Mus1 LINE L1 -3 6564 6044 4 1022 558 110 0 0 chrX 57280642 57280724 -109369572 + L1_Mus1 LINE L1 5959 6040 -527 4 1022 309 127 32 1 chrX 57283174 57283241 -109367055 + B1_Mus2 SINE Alu 46 144 -5 4 1022 325 58 19 19 chrX 57283242 57283295 -109367001 + (GA)n Simple_repeat Simple_repeat 2 54 0 4 1022 496 274 7 52 chrX 57283341 57283476 -109366820 - MER63A DNA AcHobo -45 165 37 4 1022 807 222 53 15 chrX 57284383 57284589 -109365707 + B3 SINE B2 1 214 -2 4 1022 288 301 135 0 chrX 57285490 57285623 -109364673 - MIR3 SINE MIR -15 193 43 4 1022 571 316 46 0 chrX 57286682 57286834 -109363462 + RSINE1 SINE B4 7 165 0 4 1022 901 262 92 21 chrX 57287520 57287902 -109362394 + Lx8 LINE L1 7062 7470 -3 4 1022 3898 72 4 19 chrX 57287933 57288469 -109361827 + Lx3_Mus LINE L1 6482 7009 0 4 1022 31 58 0 0 chrX 57288469 57288521 -109361775 + AT_rich Low_complexity Low_complexity 1 52 0 4 1022 411 277 31 25 chrX 57288633 57288792 -109361504 + MER57D LTR ERV1 250 409 -2 4 1022 351 0 0 0 chrX 57288805 57288844 -109361452 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1022 457 178 14 0 chrX 57288844 57288917 -109361379 - B3 SINE B2 -30 186 113 4 1022 583 232 43 71 chrX 57289013 57289222 -109361074 - B3 SINE B2 0 216 11 4 1022 2663 22 0 0 chrX 57289252 57289570 -109360726 - L1Md_T LINE L1 -56 5827 5510 4 1022 6287 40 0 0 chrX 57289570 57290319 -109359977 + L1Md_T LINE L1 5834 6582 0 4 1022 423 309 98 0 chrX 57290841 57290964 -109359332 - B3 SINE B2 -6 210 76 4 1022 543 101 0 0 chrX 57291035 57291114 -109359182 + (TC)n Simple_repeat Simple_repeat 1 79 0 4 1022 240 35 0 0 chrX 57291114 57291143 -109359153 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1022 805 219 181 14 chrX 57291185 57291477 -109358819 - Lx7 LINE L1 -230 7466 7126 4 1022 27 0 0 0 chrX 57291824 57291851 -109358445 + AT_rich Low_complexity Low_complexity 1 27 0 4 1022 618 275 68 24 chrX 57291859 57292064 -109358232 + B3 SINE B2 1 214 -2 4 1022 678 195 47 0 chrX 57292090 57292218 -109358078 + B1_Mur2 SINE Alu 8 141 -8 4 1022 5683 140 36 19 chrX 57292310 57293279 -109357017 - Lx2B LINE L1 -4 6996 6011 4 1022 21 0 0 0 chrX 57293461 57293482 -109356814 + AT_rich Low_complexity Low_complexity 1 21 0 4 1022 4424 136 14 21 chrX 57293581 57294654 -109355642 - L1Md_A LINE L1 -4409 1474 411 4 1022 307 265 78 39 chrX 57294657 57294810 -109355486 - L1M5 LINE L1 -422 5818 5660 4 1022 285 343 0 0 chrX 57295604 57295671 -109354625 - tRNA-Ala-GCY_ tRNA tRNA -3 72 6 4 1022 2415 154 14 10 chrX 57296773 57297186 -109353110 - MTC LTR MaLR -2 419 5 4 1022 27 0 0 0 chrX 57297558 57297585 -109352711 + AT_rich Low_complexity Low_complexity 1 27 0 4 1022 1630 75 0 0 chrX 57297585 57297799 -109352497 - L1Md_F2 LINE L1 -13 6569 6356 4 1022 968 218 16 0 chrX 57297806 57297994 -109352302 - B3 SINE B2 0 216 26 4 1022 189 0 0 0 chrX 57299678 57299699 -109350597 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1022 405 0 0 0 chrX 57300551 57300596 -109349700 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1022 233 245 190 20 chrX 57300752 57300852 -109349444 - PB1D10 SINE Alu 0 117 1 4 1022 275 356 51 27 chrX 57301051 57301308 -109348988 - L1M5 LINE L1 -1019 5127 4865 4 1022 1452 189 47 148 chrX 57301498 57301722 -109348574 + Lx7 LINE L1 7036 7259 -437 4 1022 2349 46 0 0 chrX 57301722 57302006 -109348290 - L1_Mus1 LINE L1 0 6567 6284 4 1022 1452 189 47 148 chrX 57302006 57302316 -109347980 + Lx7 LINE L1 7260 7516 -180 4 1022 1332 74 11 0 chrX 57302947 57303123 -109347173 + B2_Mm1t SINE B2 1 178 -15 4 1022 292 267 91 8 chrX 57303305 57303437 -109346859 + B1F2 SINE Alu 4 146 -3 4 1022 318 288 25 0 chrX 57303446 57303526 -109346770 + ID4_ SINE ID 2 83 0 4 1022 289 236 86 53 chrX 57305583 57305735 -109344561 - L1M5 LINE L1 -1975 4168 4012 4 1022 6311 132 30 31 chrX 57305745 57306734 -109343562 - Lx2B LINE L1 -1 6999 6002 4 1022 840 53 0 0 chrX 57306740 57306854 -109343442 + (GTTTG)n Simple_repeat Simple_repeat 2 115 0 4 1022 1189 55 0 0 chrX 57306854 57306993 -109343303 - B1_Mus1 SINE Alu -8 140 2 4 1022 6311 132 30 31 chrX 57306993 57307083 -109343213 - Lx2B LINE L1 -999 6001 5922 4 1022 806 275 59 13 chrX 57307947 57308143 -109342153 - B3 SINE B2 -7 188 1 4 1022 21 0 0 0 chrX 57308240 57308261 -109342035 + AT_rich Low_complexity Low_complexity 1 21 0 4 1022 471 18 0 0 chrX 57308789 57308845 -109341451 + (TAAA)n Simple_repeat Simple_repeat 3 58 0 4 1022 315 191 0 0 chrX 57309910 57309973 -109340323 + (TATG)n Simple_repeat Simple_repeat 3 65 0 4 1022 413 235 59 0 chrX 57309973 57310075 -109340221 - B1F1 SINE Alu -41 108 1 4 1022 277 301 9 17 chrX 57310140 57310255 -109340041 + (TATATG)n Simple_repeat Simple_repeat 4 117 0 4 1022 264 172 0 0 chrX 57310267 57310325 -109339971 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 1022 450 290 107 81 chrX 57310733 57310908 -109339388 + Charlie1b DNA MER1_type 39 226 -297 4 1022 766 221 0 27 chrX 57310908 57311057 -109339239 - B1_Mm SINE Alu -2 145 1 4 1022 450 290 107 81 chrX 57311057 57311189 -109339107 + Charlie1b DNA MER1_type 227 354 -169 4 1022 745 106 0 0 chrX 57311200 57311323 -109338973 - L1Md_F2 LINE L1 0 6582 6460 4 1022 2966 43 0 0 chrX 57311323 57311691 -109338605 - L1Md_F2 LINE L1 -236 6346 5979 4 1022 22 35 0 0 chrX 57311752 57311781 -109338515 + AT_rich Low_complexity Low_complexity 1 29 0 4 1022 394 306 0 0 chrX 57311829 57311914 -109338382 - B3 SINE B2 -48 168 84 4 1022 1415 80 16 0 chrX 57312097 57312284 -109338012 + B2_Mm2 SINE B2 2 191 -4 4 1022 305 324 62 0 chrX 57312395 57312574 -109337722 + L1MD2 LINE L1 6114 6303 -56 4 1022 247 333 113 10 chrX 57312688 57312785 -109337511 + PB1D10 SINE Alu 5 111 -6 4 1022 686 256 0 0 chrX 57313572 57313709 -109336587 + B1_Mur1 SINE Alu 1 137 -12 4 1022 249 33 0 0 chrX 57313771 57313801 -109336495 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1022 1343 218 16 153 chrX 57313823 57314262 -109336034 + MTE2a LTR MaLR 1 379 0 4 1022 248 300 74 60 chrX 57314265 57314414 -109335882 + MIRb SINE MIR 39 189 -79 4 1022 259 315 64 53 chrX 57314965 57315059 -109335237 - MER5A DNA MER1_type -88 101 7 4 1022 899 261 9 5 chrX 57316006 57316218 -109334078 + B3 SINE B2 4 216 0 4 1022 508 287 77 114 chrX 57316582 57316658 -109333638 + B4A SINE B4 1 76 -216 4 1022 453 19 0 0 chrX 57316658 57316712 -109333584 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1022 508 287 77 114 chrX 57316712 57316934 -109333362 + B4A SINE B4 77 288 -4 4 1022 552 126 0 0 chrX 57316949 57317036 -109333260 + (TA)n Simple_repeat Simple_repeat 1 87 0 4 1022 181 197 15 15 chrX 57317126 57317193 -109333103 + (CATA)n Simple_repeat Simple_repeat 2 68 0 4 1022 494 223 0 0 chrX 57317641 57317753 -109332543 + Lx7 LINE L1 7585 7696 0 4 1022 7217 83 17 3 chrX 57318049 57319115 -109331181 + L1_Mus4 LINE L1 5550 6630 -6 4 1022 518 75 0 12 chrX 57319197 57319278 -109331018 + (TA)n Simple_repeat Simple_repeat 2 81 0 4 1022 381 257 14 0 chrX 57319296 57319370 -109330926 + B3A SINE B2 83 157 -41 5 1022 183 80 0 0 chrX 57319383 57319408 -109330888 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 1022 1797 278 52 0 chrX 57319431 57320028 -109330268 + Lx8 LINE L1 6622 7249 -224 5 1022 762 126 0 9 chrX 57320032 57320144 -109330152 + B3 SINE B2 2 112 -104 5 1022 23 33 0 0 chrX 57320166 57320196 -109330100 + AT_rich Low_complexity Low_complexity 1 30 0 5 1022 34 0 0 0 chrX 57320266 57320300 -109329996 + AT_rich Low_complexity Low_complexity 1 34 0 5 1022 432 0 0 0 chrX 57320428 57320476 -109329820 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 5 1022 294 340 38 93 chrX 57321076 57321365 -109328931 + Tigger16a DNA Tigger 350 622 -311 5 1022 256 361 81 37 chrX 57321453 57321614 -109328682 + MIRc SINE MIR 27 194 -74 5 1022 499 309 158 16 chrX 57321702 57321955 -109328341 - B4A SINE B4 -2 290 2 5 1022 32615 90 10 4 chrX 57322170 57328256 -109322040 - L1Md_F2 LINE L1 -3 6579 450 5 1022 438 325 109 20 chrX 57329983 57330184 -109320112 + B4 SINE B4 54 272 -20 5 1022 359 293 70 47 chrX 57330723 57330895 -109319401 + Lx8 LINE L1 6464 6639 -834 5 1022 487 225 8 8 chrX 57330938 57331059 -109319237 - Lx7 LINE L1 -19 7677 7557 5 1022 15191 127 42 19 chrX 57331059 57335609 -109314687 + L1_Mur2 LINE L1 380 5299 -581 5 1022 282 311 72 33 chrX 57335863 57336016 -109314280 + LTR79 LTR ERVL 369 527 0 5 1022 3100 50 42 0 chrX 57336389 57336793 -109313503 + BGLII LTR ERVK 1 421 0 5 1022 736 245 106 0 chrX 57337348 57337536 -109312760 + B3 SINE B2 1 208 -8 5 1022 7305 166 58 7 chrX 57337693 57340041 -109310255 + Lx4B LINE L1 4537 7037 -21 5 1022 204 40 0 0 chrX 57340041 57340066 -109310230 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 5 1022 421 203 0 0 chrX 57340080 57340149 -109310147 + PB1D9 SINE Alu 1 69 -51 5 1022 238 219 0 123 chrX 57340086 57340159 -109310137 + MT2B2 LTR ERVL 171 234 -350 5 1022 3275 48 14 7 chrX 57340203 57340621 -109309675 + L1Md_F2 LINE L1 6150 6570 -12 5 1022 444 250 74 0 chrX 57340692 57340800 -109309496 + B3 SINE B2 4 119 -97 5 1022 321 26 0 0 chrX 57340803 57340841 -109309455 + (CATA)n Simple_repeat Simple_repeat 2 39 0 5 1022 31 0 0 0 chrX 57340874 57340905 -109309391 + AT_rich Low_complexity Low_complexity 1 31 0 5 1022 683 245 0 28 chrX 57341074 57341217 -109309079 + B1_Mur1 SINE Alu 10 148 -1 5 1022 196 188 15 15 chrX 57341237 57341302 -109308994 + GA-rich Low_complexity Low_complexity 3 67 0 5 1022 434 269 70 68 chrX 57342051 57342218 -109308078 + L1MB5 LINE L1 5435 5594 -580 5 1022 551 258 81 0 chrX 57342218 57342342 -109307954 + B1_Mur1 SINE Alu 1 134 -15 5 1022 434 287 78 65 chrX 57342342 57342438 -109307858 + L1MB5 LINE L1 5595 5682 -492 5 1022 925 238 19 9 chrX 57342438 57342650 -109307646 + B3 SINE B2 2 215 -1 5 1022 434 287 78 65 chrX 57342650 57342818 -109307478 + L1MB5 LINE L1 5683 5868 -306 5 1022 1051 157 117 0 chrX 57342826 57343023 -109307273 + URR1A DNA MER1_type 2 221 -5 5 1022 2850 85 27 0 chrX 57343023 57343434 -109306862 + BGLII_Mus LTR ERVK 1 422 0 5 1022 310 290 18 20 chrX 57343437 57343613 -109306683 + L1MB5 LINE L1 5862 6031 -147 5 1022 26 0 0 0 chrX 57343627 57343653 -109306643 + AT_rich Low_complexity Low_complexity 1 26 0 5 1022 352 266 44 9 chrX 57343685 57343799 -109306497 - PB1D7 SINE Alu -1 119 2 5 1022 303 238 44 80 chrX 57343819 57343901 -109306395 + L1MB5 LINE L1 6044 6129 -55 5 1022 1089 204 14 5 chrX 57343901 57344123 -109306173 + URR1B DNA MER1_type 2 225 0 5 1022 303 238 44 80 chrX 57344123 57344177 -109306119 + L1MB5 LINE L1 6130 6175 -9 5 1022 226 292 98 37 chrX 57344604 57344849 -109305447 + HAL1 LINE L1 788 1047 -1460 5 1022 298 257 67 13 chrX 57344911 57344986 -109305310 + B4 SINE B4 2 80 -212 5 1022 3832 85 10 110 chrX 57345002 57345904 -109304392 + L1VL4 LINE L1 388 1194 -2365 5 1022 1253 124 10 0 chrX 57345904 57346097 -109304199 + L1_Mus2 LINE L1 6372 6566 0 5 1022 1258 164 6 263 chrX 57346097 57346196 -109304100 + L1_Mm LINE L1 1550 1563 -4320 5 1022 1233 74 0 0 chrX 57346196 57346439 -109303857 + (GAA)n Simple_repeat Simple_repeat 1 243 0 5 1022 1258 164 6 263 chrX 57346439 57346595 -109303701 + L1_Mm LINE L1 1564 1719 -4164 5 1022 5778 114 17 11 chrX 57346593 57348484 -109301812 + L1Md_F LINE L1 189 2090 -3793 5 1022 35731 61 16 6 chrX 57348487 57352796 -109297500 + L1Md_F2 LINE L1 325 4658 -1225 5 1022 1519 49 25 0 chrX 57352796 57353000 -109297296 - L1Md_F2 LINE L1 -2 6580 6372 5 1022 35731 46 3 3 chrX 57353000 57354375 -109295921 + L1Md_F2 LINE L1 4659 6026 -556 5 1022 2765 95 17 22 chrX 57354375 57354786 -109295510 + L1Md_F2 LINE L1 6161 6569 -13 5 1022 3901 101 22 9 chrX 57354797 57355435 -109294861 + MusHAL1 LINE L1 502 1147 -1565 5 1022 349 85 0 0 chrX 57355439 57355486 -109294810 + Lx2 LINE L1 5533 5579 -304 5 1022 5796 125 1 10 chrX 57355490 57355565 -109294731 + Lx2 LINE L1 5723 5790 -1207 5 1022 1653 21 0 0 chrX 57355565 57355752 -109294544 + B2_Mm1t SINE B2 2 188 -5 5 1022 5796 125 1 10 chrX 57355752 57356605 -109293691 + Lx2 LINE L1 5791 6643 -354 5 1022 1415 138 0 0 chrX 57356605 57356822 -109293474 + Lx2 LINE L1 6775 6991 -6 5 1022 33 47 0 15 chrX 57356822 57356845 -109293451 + AT_rich Low_complexity Low_complexity 1 23 0 5 1022 1393 60 16 0 chrX 57356845 57357027 -109293269 - B2_Mm2 SINE B2 -9 186 2 5 1022 33 47 0 15 chrX 57357027 57357068 -109293228 + AT_rich Low_complexity Low_complexity 1 41 0 5 1022 685 196 13 53 chrX 57357080 57357209 -109293087 + B1_Mur2 SINE Alu 5 130 -19 5 1022 1823 156 16 6 chrX 57357209 57357532 -109292764 + ORR1A3 LTR MaLR 1 326 0 5 1022 685 196 13 53 chrX 57357532 57357553 -109292743 + B1_Mur2 SINE Alu 131 149 0 5 1022 686 269 73 58 chrX 57357568 57357773 -109292523 + B4 SINE B4 81 288 -4 5 1022 5542 77 8 8 chrX 57358801 57359551 -109290745 - L1Md_F2 LINE L1 -1 6581 5832 5 1022 494 238 138 36 chrX 57359695 57359891 -109290405 + B3 SINE B2 1 216 0 5 1022 344 153 141 0 chrX 57360344 57360429 -109289867 + HAL1 LINE L1 2301 2397 -110 5 1022 405 0 0 0 chrX 57360503 57360548 -109289748 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 5 1022 6295 71 18 5 chrX 57360970 57361804 -109288492 - L1_Mus3 LINE L1 -6 6632 5788 5 1022 845 204 0 0 chrX 57362735 57362877 -109287419 - B1_Mur4 SINE Alu -7 143 2 5 1022 1105 90 6 24 chrX 57363921 57364091 -109286205 + URR1A DNA MER1_type 60 226 0 5 1022 503 225 125 0 chrX 57364227 57364347 -109285949 + B1F2 SINE Alu 2 136 -13 5 1022 194 0 39 0 chrX 57364511 57364537 -109285759 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1022 508 260 62 8 chrX 57364925 57365053 -109285243 - B1_Mur2 SINE Alu -12 137 3 5 1022 1599 194 132 11 chrX 57365233 57365588 -109284708 + MTD LTR MaLR 8 405 -14 5 1022 397 245 146 52 chrX 57365629 57365896 -109284400 + L1MA9 LINE L1 6020 6311 -1 5 1022 809 244 31 0 chrX 57365900 57366093 -109284203 + B3 SINE B2 1 199 -17 5 1022 254 292 28 9 chrX 57366095 57366195 -109284101 + (TATATG)n Simple_repeat Simple_repeat 2 103 0 5 1022 228 35 0 0 chrX 57366195 57366224 -109284072 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1022 254 292 28 9 chrX 57366224 57366230 -109284066 + (TATATG)n Simple_repeat Simple_repeat 2 7 0 5 1022 736 292 98 31 chrX 57367244 57367530 -109282766 - MER44A DNA MER2_type -8 331 27 5 1022 349 366 46 0 chrX 57367551 57367566 -109282730 + B4 SINE B4 69 89 -203 5 1022 488 320 0 0 chrX 57367566 57367694 -109282602 + B1_Mur2 SINE Alu 1 128 -21 5 1022 413 162 0 45 chrX 57367698 57367808 -109282488 + GA-rich Low_complexity Low_complexity 2 106 0 5 1022 225 0 0 0 chrX 57368247 57368272 -109282024 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 5 1022 411 306 0 91 chrX 57368749 57368925 -109281371 + RSINE1 SINE B4 2 161 -4 5 1022 220 316 34 17 chrX 57369049 57369168 -109281128 - MIR SINE MIR -14 248 128 5 1022 220 329 171 0 chrX 57369355 57369425 -109280871 + ID4 SINE ID 2 83 0 5 1022 5104 63 0 25 chrX 57369777 57370457 -109279839 + L1Md_F2 LINE L1 5920 6582 0 5 1022 210 310 28 14 chrX 57371178 57371250 -109279046 - L2 LINE L2 -1023 2396 2324 5 1022 769 232 15 35 chrX 57371822 57372019 -109278277 - B3A SINE B2 -5 193 1 5 1022 2445 18 0 10 chrX 57372487 57372775 -109277521 + L1Md_A LINE L1 6298 6582 0 5 1022 237 65 0 0 chrX 57372846 57372877 -109277419 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 5 1022 230 274 146 36 chrX 57372933 57373043 -109277253 - MIRb SINE MIR -68 200 79 5 1022 791 257 0 54 chrX 57374318 57374540 -109275756 + B3 SINE B2 2 211 -5 5 1022 766 170 15 15 chrX 57374559 57374696 -109275600 + B1_Mur1 SINE Alu 7 143 -6 5 1022 1186 252 30 69 chrX 57374772 57375017 -109275279 + B4A SINE B4 2 253 -39 5 1022 1446 70 30 82 chrX 57375017 57375250 -109275046 + L1_Mus2 LINE L1 6345 6565 -1 5 1022 1186 252 30 69 chrX 57375250 57375307 -109274989 + B4A SINE B4 254 292 0 5 1022 888 287 123 11 chrX 57375427 57375688 -109274608 + B4A SINE B4 3 292 0 5 1022 376 253 33 0 chrX 57375971 57376062 -109274234 + B1_Mur1 SINE Alu 47 140 -9 5 1022 189 0 0 0 chrX 57376074 57376095 -109274201 + (TAA)n Simple_repeat Simple_repeat 1 21 0 5 1022 484 294 50 38 chrX 57376609 57376768 -109273528 - RSINE1 SINE B4 0 165 5 5 1022 776 215 0 45 chrX 57376807 57376963 -109273333 + B1_Mur1 SINE Alu 1 149 0 5 1022 475 271 30 15 chrX 57376983 57377118 -109273178 - MER5B DNA MER1_type -41 137 1 5 1022 1223 188 0 18 chrX 57378713 57378940 -109271356 - URR1A DNA MER1_type -2 224 2 5 1022 1334 246 106 13 chrX 57378946 57379325 -109270971 + MTD LTR MaLR 6 419 0 5 1022 373 194 0 0 chrX 57379872 57379934 -109270362 - ID_B1 SINE B4 -3 221 160 5 1022 226 245 0 0 chrX 57380527 57380576 -109269720 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 5 1022 408 258 143 10 chrX 57380578 57380774 -109269522 + L1MC4 LINE L1 6685 6906 -1136 5 1022 1216 42 123 24 chrX 57381018 57381188 -109269108 - B2_Mm2 SINE B2 -7 188 2 5 1022 732 215 7 15 chrX 57381189 57381326 -109268970 + B1_Mur1 SINE Alu 12 147 -2 6 1022 622 288 42 47 chrX 57381359 57381542 -109268754 + B3 SINE B2 3 185 -31 6 1022 198 0 0 0 chrX 57381542 57381564 -109268732 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 1022 622 288 42 47 chrX 57381564 57381595 -109268701 + B3 SINE B2 186 216 0 6 1022 649 287 152 15 chrX 57381645 57381843 -109268453 + B4 SINE B4 6 230 -62 6 1022 408 40 0 0 chrX 57381855 57381905 -109268391 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1022 339 329 37 12 chrX 57381921 57382084 -109268212 + L1MC4 LINE L1 7695 7861 -181 5 1022 524 56 0 0 chrX 57382166 57382237 -109268059 + B1_Mus2 SINE Alu 77 147 0 6 1022 262 167 0 143 chrX 57382168 57382245 -109268051 + ID_B1 SINE B4 159 224 0 6 1022 209 83 28 0 chrX 57382795 57382831 -109267465 + (GAAA)n Simple_repeat Simple_repeat 3 39 0 6 1022 507 324 35 0 chrX 57382844 57382986 -109267310 + B1_Mur1 SINE Alu 3 149 0 6 1022 935 267 17 39 chrX 57383534 57383764 -109266532 + B4 SINE B4 4 228 -64 6 1022 842 263 47 38 chrX 57383764 57383977 -109266319 + B3 SINE B2 1 215 -1 6 1022 211 273 0 0 chrX 57384582 57384626 -109265670 + ID2 SINE ID 38 81 -2 6 1022 22 0 0 0 chrX 57384626 57384648 -109265648 + AT_rich Low_complexity Low_complexity 1 22 0 6 1022 872 62 0 0 chrX 57384686 57384798 -109265498 - L1Md_F2 LINE L1 -441 6141 6030 6 1022 3690 45 0 0 chrX 57384798 57385247 -109265049 + L1Md_F2 LINE L1 6134 6582 0 6 1022 1185 75 0 0 chrX 57385410 57385557 -109264739 + B1_Mus2 SINE Alu 1 147 0 6 1022 1114 203 19 0 chrX 57385885 57386092 -109264204 + B3 SINE B2 1 211 -5 6 1022 533 291 0 22 chrX 57386167 57386304 -109263992 + ID_B1 SINE B4 87 220 -4 6 1022 314 309 21 0 chrX 57386308 57386422 -109263874 + ID4_ SINE ID 15 134 -18 6 1022 1288 0 13 0 chrX 57386445 57386597 -109263699 + (GGAGAA)n Simple_repeat Simple_repeat 5 158 0 6 1022 484 224 11 22 chrX 57386599 57386777 -109263519 + GA-rich Low_complexity Low_complexity 3 178 0 6 1022 1038 54 0 104 chrX 57387306 57387470 -109262826 + B1_Mm SINE Alu 1 147 0 6 1022 392 331 78 21 chrX 57388107 57388298 -109261998 - MIRb SINE MIR -15 253 52 6 1022 2062 232 107 51 chrX 57389882 57390866 -109259430 - L1MA4 LINE L1 -21 6279 5215 6 1022 2644 157 146 50 chrX 57390872 57391495 -109258801 - RMER6C LTR ERVK -6 684 2 6 1022 739 236 182 27 chrX 57391496 57391870 -109258426 - L1MA4 LINE L1 -934 5209 4778 6 1022 442 211 138 17 chrX 57391935 57392051 -109258245 + RSINE1 SINE B4 3 132 -33 6 1022 496 249 165 60 chrX 57392524 57392772 -109257524 - MTE2b LTR MaLR 0 379 106 6 1022 248 160 60 0 chrX 57392792 57392842 -109257454 - MTE2b LTR MaLR -349 70 18 6 1022 215 314 129 0 chrX 57393348 57393418 -109256878 - ID4_ SINE ID -2 81 3 6 1022 924 248 5 40 chrX 57394068 57394291 -109256005 + B3 SINE B2 2 216 0 6 1022 412 183 0 0 chrX 57394314 57394385 -109255911 + B1_Mur1 SINE Alu 58 128 -21 6 1022 561 68 0 0 chrX 57394386 57394460 -109255836 + (GGGA)n Simple_repeat Simple_repeat 4 77 0 6 1022 778 277 21 104 chrX 57394470 57394635 -109255661 + B3A SINE B2 10 167 -31 6 1022 431 48 16 0 chrX 57394635 57394697 -109255599 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 1022 489 277 21 104 chrX 57394697 57394724 -109255572 + B2_Mm2 SINE B2 162 186 -9 6 1022 427 295 87 31 chrX 57394735 57394942 -109255354 + MER102c DNA MER1_type 77 317 -2111 6 1022 798 301 109 63 chrX 57395195 57395668 -109254628 - MLT1D LTR MaLR -13 614 108 6 1022 431 278 195 6 chrX 57395668 57395842 -109254454 - ID_B1 SINE B4 -17 207 1 6 1022 425 269 50 131 chrX 57395842 57395955 -109254341 - MLT1D LTR MaLR -398 107 1 6 1022 1088 104 0 0 chrX 57396028 57396172 -109254124 + B2_Mm2 SINE B2 13 156 -39 6 1022 1448 84 11 0 chrX 57396186 57396365 -109253931 + B2_Mm2 SINE B2 1 181 -14 6 1022 218 267 50 0 chrX 57396541 57396601 -109253695 + B4 SINE B4 26 88 -204 6 1022 842 242 136 5 chrX 57397872 57398063 -109252233 - B3 SINE B2 0 216 1 6 1022 246 174 0 0 chrX 57398390 57398436 -109251860 + (TA)n Simple_repeat Simple_repeat 1 46 0 6 1022 219 36 0 0 chrX 57399842 57399870 -109250426 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1022 229 195 0 0 chrX 57399986 57400027 -109250269 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 6 1022 429 212 122 50 chrX 57401344 57401483 -109248813 + L1MA6 LINE L1 6126 6274 -26 6 1022 225 0 0 0 chrX 57401502 57401527 -109248769 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 6 1022 808 194 14 14 chrX 57401527 57401662 -109248634 - B1_Mus2 SINE Alu -9 138 2 6 1022 1181 184 48 14 chrX 57401680 57401889 -109248407 - B3 SINE B2 0 216 1 6 1022 22 35 0 0 chrX 57402225 57402254 -109248042 + AT_rich Low_complexity Low_complexity 1 29 0 6 1022 451 292 46 84 chrX 57402376 57402492 -109247804 + B3A SINE B2 68 183 -15 6 1022 393 22 0 0 chrX 57402492 57402538 -109247758 + (CATA)n Simple_repeat Simple_repeat 2 47 0 6 1022 451 292 46 84 chrX 57402538 57402552 -109247744 + B3A SINE B2 184 193 -5 6 1022 25 51 0 0 chrX 57402558 57402597 -109247699 + AT_rich Low_complexity Low_complexity 1 39 0 6 1022 4102 113 10 34 chrX 57402606 57403202 -109247094 - MT2B2 LTR ERVL -2 582 1 6 1022 1641 242 28 3 chrX 57403244 57403600 -109246696 + ORR1D2 LTR MaLR 1 365 -5 6 1022 349 205 127 13 chrX 57403776 57403855 -109246441 - B4A SINE B4 -204 88 1 6 1022 229 173 38 19 chrX 57403858 57403911 -109246385 - PB1D9 SINE Alu 0 120 67 6 1022 986 155 7 13 chrX 57404257 57404407 -109245889 - B1_Mur3 SINE Alu 0 149 1 6 1022 1280 54 0 0 chrX 57404537 57404685 -109245611 + B1_Mus1 SINE Alu 1 148 0 6 1022 315 71 0 0 chrX 57404723 57404765 -109245531 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 6 1022 976 218 50 5 chrX 57404842 57405040 -109245256 - ID_B1 SINE B4 -6 218 12 6 1022 1301 260 62 38 chrX 57405100 57405468 -109244828 + MTE2a LTR MaLR 1 377 -2 6 1022 465 66 0 0 chrX 57405986 57406047 -109244249 + (TA)n Simple_repeat Simple_repeat 1 61 0 6 1022 706 184 56 14 chrX 57406293 57406436 -109243860 + B1_Mur2 SINE Alu 1 149 0 6 1022 803 189 31 0 chrX 57406517 57406644 -109243652 + B1_Mus2 SINE Alu 2 132 -15 6 1022 294 95 0 0 chrX 57406648 57406690 -109243606 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1022 700 245 10 74 chrX 57406758 57406961 -109243335 + B3A SINE B2 3 192 -6 6 1022 568 233 102 29 chrX 57407346 57407483 -109242813 + B1_Mur1 SINE Alu 2 148 -1 6 1022 3327 32 8 0 chrX 57407494 57407872 -109242424 + L1Md_F2 LINE L1 6202 6582 0 6 1022 537 311 58 76 chrX 57407915 57408050 -109242246 - B4A SINE B4 -6 286 152 6 1022 1202 68 0 20 chrX 57408050 57408200 -109242096 + B1_Mus1 SINE Alu 2 148 0 6 1022 537 311 58 76 chrX 57408200 57408287 -109242009 - B4A SINE B4 -141 151 68 6 1022 688 59 30 0 chrX 57409054 57409155 -109241141 + (GAAA)n Simple_repeat Simple_repeat 2 105 0 6 1022 711 212 0 91 chrX 57409289 57409443 -109240853 + B3 SINE B2 50 199 -17 6 127 1163 112 34 0 chrX 57409463 57409642 -109240654 - L1_Mus3 LINE L1 -7 6631 6447 6 1023 418 266 54 39 chrX 57409670 57409799 -109240497 + B3A SINE B2 1 131 -67 6 1023 252 22 67 0 chrX 57409872 57409917 -109240379 + (TTG)n Simple_repeat Simple_repeat 2 49 0 6 1023 1194 57 0 0 chrX 57409917 57410057 -109240239 - B1_Mus2 SINE Alu -7 140 1 6 1023 305 280 60 0 chrX 57410099 57410199 -109240097 + L1MD LINE L1 2395 2500 -3646 6 1023 580 120 32 0 chrX 57410237 57410362 -109239934 + (TCTCTG)n Simple_repeat Simple_repeat 2 130 0 6 1023 1100 205 107 100 chrX 57410363 57410774 -109239522 + MTD LTR MaLR 3 416 -3 6 1023 1290 48 0 13 chrX 57410774 57410923 -109239373 + B1_Mus1 SINE Alu 2 148 0 6 1023 201 218 18 35 chrX 57410923 57410980 -109239316 + (CAAG)n Simple_repeat Simple_repeat 1 56 0 6 1023 234 253 0 51 chrX 57411050 57411129 -109239167 + CR1_Mam LINE CR1 1127 1201 -1003 6 1023 218 182 0 0 chrX 57411408 57411441 -109238855 + ID4 SINE ID 2 34 -49 6 1023 646 205 25 0 chrX 57411609 57411770 -109238526 + CT-rich Low_complexity Low_complexity 3 167 0 6 1023 1176 106 0 12 chrX 57411877 57412049 -109238247 + B2_Mm2 SINE B2 1 170 -25 6 1023 1304 48 0 0 chrX 57412159 57412306 -109237990 + B1_Mus2 SINE Alu 1 147 0 6 1023 454 287 154 30 chrX 57412327 57412496 -109237800 + B3 SINE B2 27 216 0 6 1023 711 242 0 0 chrX 57412509 57412641 -109237655 + B1_Mur1 SINE Alu 5 136 -13 6 1023 1505 79 16 10 chrX 57412643 57412835 -109237461 + B2_Mm2 SINE B2 1 193 -2 6 1023 1492 64 5 36 chrX 57412861 57413056 -109237240 + B2_Mm1t SINE B2 2 190 -3 6 1023 471 280 182 25 chrX 57414072 57414270 -109236026 + MIRb SINE MIR 31 259 -9 6 1023 427 195 16 70 chrX 57415162 57415298 -109234998 + PB1D9 SINE Alu 24 144 -5 6 1023 596 264 79 47 chrX 57416081 57416296 -109234000 + ID_B1 SINE B4 3 224 0 6 1023 575 187 120 93 chrX 57416474 57416657 -109233639 + B3A SINE B2 1 188 -10 6 1023 1023 204 73 24 chrX 57416771 57416977 -109233319 - B3 SINE B2 0 216 1 6 1023 611 294 0 0 chrX 57417236 57417362 -109232934 - ID_B1 SINE B4 -9 215 90 6 1023 887 8 22 29 chrX 57417377 57417513 -109232783 + (TCTCC)n Simple_repeat Simple_repeat 2 136 0 6 1023 860 185 15 0 chrX 57417553 57417688 -109232608 - B1_Mus1 SINE Alu -7 141 5 6 1023 183 42 0 0 chrX 57418550 57418574 -109231722 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 6 1023 1216 201 20 0 chrX 57418827 57419031 -109231265 - B3 SINE B2 -8 208 1 6 1023 774 200 143 11 chrX 57419356 57419538 -109230758 - B3 SINE B2 0 216 11 6 1023 355 284 0 59 chrX 57420066 57420167 -109230129 + PB1D10 SINE Alu 17 111 -6 6 1023 2129 164 35 3 chrX 57420177 57420543 -109229753 + L1_Mur3 LINE L1 5492 5869 -11 7 1023 1142 237 39 94 chrX 57420576 57420876 -109229420 + Lx6 LINE L1 6225 6746 -714 7 1023 1234 141 5 0 chrX 57420876 57421060 -109229236 + B2_Mm1t SINE B2 3 187 -6 7 1023 1142 218 28 119 chrX 57421060 57421144 -109229152 + Lx6 LINE L1 6747 6806 -654 7 1023 778 224 19 19 chrX 57421188 57421343 -109228953 - B3A SINE B2 -38 160 6 7 1023 410 309 34 67 chrX 57421660 57421809 -109228487 + B1F SINE Alu 1 144 -5 7 1023 3298 70 36 5 chrX 57421988 57422405 -109227891 + RLTR23 LTR ERV1 1 430 0 7 1023 1174 49 20 27 chrX 57423333 57423480 -109226816 - B1_Mm SINE Alu 0 147 2 7 1023 375 317 113 8 chrX 57423520 57423644 -109226652 + B1F SINE Alu 1 137 -12 7 1023 242 143 0 20 chrX 57423676 57423726 -109226570 + GA-rich Low_complexity Low_complexity 3 51 0 7 1023 278 158 35 0 chrX 57423785 57423842 -109226454 - B1_Mm SINE Alu 0 147 89 7 1023 1255 68 0 0 chrX 57423856 57424003 -109226293 - B1_Mus2 SINE Alu 0 147 1 7 1023 1204 192 106 27 chrX 57424006 57424317 -109225979 + RMER19B LTR ERVK 2 379 -358 7 1023 1035 210 14 33 chrX 57424583 57424795 -109225501 - B3 SINE B2 -7 209 2 7 1023 272 250 33 16 chrX 57425784 57425845 -109224451 + PB1D10 SINE Alu 13 74 -43 7 1023 215 318 0 57 chrX 57426016 57426086 -109224210 + B1F SINE Alu 78 143 -6 7 1023 319 225 39 77 chrX 57426098 57426228 -109224068 + L1M4 LINE L1 4560 4684 -1462 7 1023 216 250 0 0 chrX 57426266 57426306 -109223990 + B3 SINE B2 1 40 -176 7 1023 387 229 202 8 chrX 57426308 57426427 -109223869 + B1_Mur1 SINE Alu 2 143 -6 7 1023 488 330 80 11 chrX 57426323 57426498 -109223798 + B4A SINE B4 106 292 0 7 1023 838 305 72 40 chrX 57426533 57426963 -109223333 + Tigger15a DNA TcMar 175 618 -97 7 1023 899 268 9 18 chrX 57427053 57427270 -109223026 + ID_B1 SINE B4 10 224 0 7 1023 1178 82 0 20 chrX 57427414 57427564 -109222732 + B1_Mus1 SINE Alu 2 148 0 7 1023 216 97 0 0 chrX 57427586 57427617 -109222679 + (A)n Simple_repeat Simple_repeat 1 31 0 7 1023 456 192 142 19 chrX 57428132 57428238 -109222058 - PB1D9 SINE Alu 0 120 2 7 1023 728 168 136 8 chrX 57428295 57428427 -109221869 - B1_Mur4 SINE Alu -1 149 1 7 1023 328 145 0 28 chrX 57428439 57428510 -109221786 - Lx LINE L1 0 6654 6586 7 1023 821 199 0 47 chrX 57428514 57428662 -109221634 - B1_Mus2 SINE Alu -2 145 5 7 1023 354 274 131 9 chrX 57429046 57429143 -109221153 + PB1D7 SINE Alu 1 110 -10 7 1023 1203 68 0 39 chrX 57429143 57429296 -109221000 + B1_Mus2 SINE Alu 1 147 0 7 1023 262 61 20 20 chrX 57429308 57429358 -109220938 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 7 1023 475 286 95 0 chrX 57429358 57429484 -109220812 + RSINE1 SINE B4 28 165 0 7 1023 290 359 54 0 chrX 57429535 57429627 -109220669 + PB1 SINE Alu 1 97 -30 7 1023 288 0 0 0 chrX 57429646 57429678 -109220618 + (CAA)n Simple_repeat Simple_repeat 1 32 0 7 1023 230 184 0 93 chrX 57429985 57430039 -109220257 + BC1_Mm scRNA scRNA 9 57 -95 7 1023 351 121 0 0 chrX 57430067 57430125 -109220171 + (TG)n Simple_repeat Simple_repeat 2 59 0 7 1023 207 0 0 0 chrX 57430290 57430313 -109219983 + (T)n Simple_repeat Simple_repeat 1 23 0 7 1023 311 262 91 33 chrX 57431390 57431666 -109218630 - RMER17D LTR ERVK -337 552 261 7 1023 304 285 120 87 chrX 57432766 57432916 -109217380 + RSINE1 SINE B4 3 157 -8 7 1023 383 228 497 28 chrX 57432942 57433087 -109217209 + ID_B1 SINE B4 5 217 -7 7 1023 207 261 0 0 chrX 57433315 57433361 -109216935 + GA-rich Low_complexity Low_complexity 4 49 0 7 1023 1276 41 0 45 chrX 57433412 57433566 -109216730 + B1_Mus1 SINE Alu 1 147 -1 7 1023 824 29 10 0 chrX 57433697 57433801 -109216495 - B1_Mus2 SINE Alu 0 147 43 7 1023 1063 104 0 0 chrX 57433857 57433991 -109216305 - B1_Mm SINE Alu -11 136 3 7 1023 325 301 61 9 chrX 57434391 57434505 -109215791 + ID_B1 SINE B4 70 189 -35 7 1023 411 68 0 0 chrX 57434514 57434573 -109215723 + (TCTA)n Simple_repeat Simple_repeat 1 59 0 7 1023 256 265 0 0 chrX 57434607 57434656 -109215640 - Lx7 LINE L1 -2051 5645 5597 7 1023 533 55 0 14 chrX 57434662 57434736 -109215560 + (TCCCC)n Simple_repeat Simple_repeat 5 77 0 7 1023 434 103 0 0 chrX 57434736 57434794 -109215502 + (TC)n Simple_repeat Simple_repeat 1 58 0 7 1023 507 317 0 0 chrX 57434797 57434917 -109215379 - B1F SINE Alu -29 120 1 7 1023 703 248 93 13 chrX 57436032 57436269 -109214027 + MLT2C1 LTR ERVL 31 286 -111 7 1023 239 87 0 42 chrX 57436381 57436429 -109213867 + (TCTCTG)n Simple_repeat Simple_repeat 2 47 0 7 1023 193 336 73 32 chrX 57436551 57436674 -109213622 + L2a LINE L2 2912 3039 -387 7 1023 3416 41 15 0 chrX 57436691 57437081 -109213215 - MTA_Mm LTR MaLR 0 396 1 7 1023 8645 67 23 3 chrX 57437081 57438157 -109212139 - MTA_Mm-int LTR MaLR 0 1098 1 7 1023 2854 46 144 0 chrX 57438157 57438503 -109211793 - MTA_Mm LTR MaLR 0 396 1 7 1023 218 288 34 0 chrX 57438530 57438589 -109211707 + L2a LINE L2 3115 3175 -251 7 1023 6635 178 67 6 chrX 57438593 57439955 -109210341 + Lx5 LINE L1 5515 6970 -80 7 1023 22 80 0 0 chrX 57440087 57440137 -109210159 + AT_rich Low_complexity Low_complexity 1 50 0 7 1023 708 240 118 15 chrX 57440529 57440724 -109209572 + ID_B1 SINE B4 3 217 -7 7 1023 280 119 34 0 chrX 57440724 57440783 -109209513 + (CATA)n Simple_repeat Simple_repeat 3 63 0 7 1023 266 369 24 8 chrX 57440783 57440906 -109209390 - MER63A DNA AcHobo -85 125 1 7 1023 322 364 143 29 chrX 57440987 57441059 -109209237 + LTR16A LTR ERVL 89 164 -287 7 1023 3385 138 9 24 chrX 57441059 57441595 -109208701 + RLTR11A LTR ERVK 1 528 0 7 1023 322 364 143 29 chrX 57441595 57441760 -109208536 + LTR16A LTR ERVL 165 353 -98 7 1023 466 174 0 176 chrX 57441836 57442052 -109208244 + polypurine Low_complexity Low_complexity 2 179 0 7 1023 303 174 13 92 chrX 57442324 57442400 -109207896 + ID2 SINE ID 1 70 -13 7 1023 591 254 23 8 chrX 57442647 57442778 -109207518 + ID_B1 SINE B4 90 222 -2 7 1023 788 225 0 7 chrX 57442816 57442959 -109207337 + B1_Mur1 SINE Alu 3 144 -5 7 1023 215 173 19 0 chrX 57443054 57443106 -109207190 + CT-rich Low_complexity Low_complexity 3 55 0 7 1023 426 236 56 0 chrX 57443137 57443226 -109207070 - B1_Mus2 SINE Alu -13 134 41 7 1023 495 47 0 0 chrX 57443226 57443268 -109207028 + (TTC)n Simple_repeat Simple_repeat 1 42 0 7 1023 1329 73 0 0 chrX 57443268 57443446 -109206850 + (TCC)n Simple_repeat Simple_repeat 3 180 0 7 1023 495 47 0 0 chrX 57443446 57443467 -109206829 + (TTC)n Simple_repeat Simple_repeat 1 21 0 7 1023 1217 64 0 0 chrX 57443472 57443612 -109206684 - B1_Mm SINE Alu -6 141 2 7 1023 263 257 19 1 chrX 57443612 57443665 -109206631 - PB1D9 SINE Alu -95 54 1 7 1023 1273 240 75 21 chrX 57443785 57444117 -109206179 - MTD LTR MaLR -2 417 68 7 1023 285 247 37 12 chrX 57444631 57444713 -109205583 + B1F SINE Alu 1 84 -65 7 1023 510 261 57 25 chrX 57445086 57445243 -109205053 - RSINE1 SINE B4 0 165 4 7 1023 22 0 0 0 chrX 57446047 57446069 -109204227 + AT_rich Low_complexity Low_complexity 1 22 0 7 1023 462 185 69 224 chrX 57446073 57446148 -109204148 + B1_Mur1 SINE Alu 3 59 -90 7 1023 1088 89 0 14 chrX 57446148 57446296 -109204000 - B1_Mus2 SINE Alu 0 147 2 7 1023 462 185 69 224 chrX 57446296 57446394 -109203902 + B1_Mur1 SINE Alu 60 149 0 7 1023 232 288 0 0 chrX 57446506 57446565 -109203731 + (TA)n Simple_repeat Simple_repeat 2 60 0 7 1023 979 91 11 39 chrX 57446652 57446834 -109203462 + (TTTCC)n Simple_repeat Simple_repeat 3 179 0 7 1023 631 204 0 77 chrX 57446834 57446977 -109203319 - B1_Mur1 SINE Alu -1 148 17 7 1023 2895 76 18 0 chrX 57447009 57447404 -109202892 - Lx3_Mus LINE L1 0 7009 6608 7 1023 775 241 116 0 chrX 57447408 57447607 -109202689 - ID_B1 SINE B4 0 224 3 7 1023 1292 81 32 16 chrX 57447623 57447811 -109202485 - B2_Mm1t SINE B2 -2 191 1 7 1023 351 275 36 36 chrX 57447837 57448033 -109202263 - L1MA8 LINE L1 -130 6161 5966 7 1023 352 230 14 0 chrX 57448079 57448153 -109202143 - PB1D9 SINE Alu -5 115 41 7 1023 524 267 0 0 chrX 57448613 57448718 -109201578 - B3 SINE B2 -5 211 107 7 1023 1214 105 16 6 chrX 57448798 57448980 -109201316 - B2_Mm1t SINE B2 -8 185 2 7 1023 24 0 0 0 chrX 57449155 57449179 -109201117 + AT_rich Low_complexity Low_complexity 1 24 0 7 1023 1100 95 0 0 chrX 57449183 57449331 -109200965 - B1_Mus1 SINE Alu 0 148 1 7 1023 715 183 0 9 chrX 57449333 57449449 -109200847 - B1_Mur4 SINE Alu -2 148 34 7 1023 27882 83 18 51 chrX 57449450 57453530 -109196766 + L1Md_A LINE L1 1147 5280 -603 7 1023 234 307 6 39 chrX 57453530 57453686 -109196610 + ORR1B1-int LTR MaLR 597 747 -762 7 1023 558 219 10 88 chrX 57453565 57453594 -109196702 + ID_B1 SINE B4 74 185 -39 7 1023 1024 79 0 0 chrX 57453594 57453733 -109196563 + B1_Mm SINE Alu 9 147 0 7 1023 27882 83 18 51 chrX 57453741 57454031 -109196265 + L1Md_A LINE L1 5281 5575 -308 7 1023 33727 43 2 3 chrX 57454030 57459246 -109191050 + L1Md_T LINE L1 287 5589 -297 7 1023 8287 35 11 0 chrX 57459247 57460231 -109190065 + L1Md_T LINE L1 5591 6585 0 7 1023 7491 77 6 1 chrX 57460540 57461527 -109188769 + L1Md_F2 LINE L1 5587 6578 -4 7 1023 374 202 8 73 chrX 57461527 57461650 -109188646 - L1_Rod LINE L1 -1932 3915 3801 7 1023 3678 234 35 75 chrX 57461690 57462820 -109187476 + Lx5 LINE L1 5839 6930 -120 7 1023 1105 86 0 0 chrX 57462820 57462959 -109187337 - B1_Mus1 SINE Alu -9 139 1 7 1023 3678 234 35 75 chrX 57462959 57463090 -109187206 + Lx5 LINE L1 6931 7050 0 7 1023 738 34 0 0 chrX 57463093 57463182 -109187114 + (GGAA)n Simple_repeat Simple_repeat 3 91 0 7 1023 438 108 0 0 chrX 57463435 57463500 -109186796 + (TG)n Simple_repeat Simple_repeat 2 66 0 8 1023 1330 48 0 6 chrX 57463534 57463703 -109186593 + B2_Mm2 SINE B2 19 186 -9 8 1023 1427 89 14 0 chrX 57463753 57463967 -109186329 - Lx2 LINE L1 -6 6991 6775 8 1023 2252 70 54 3 chrX 57463965 57464296 -109186000 - Lx2 LINE L1 -352 6645 6298 8 1023 671 233 132 0 chrX 57464492 57464681 -109185615 + ID_B1 SINE B4 2 215 -9 8 1023 219 114 0 0 chrX 57465248 57465283 -109185013 + (CCA)n Simple_repeat Simple_repeat 1 35 0 8 1023 716 230 7 0 chrX 57465286 57465421 -109184875 - B1_Mur2 SINE Alu -13 136 1 8 1023 694 228 0 0 chrX 57465440 57465563 -109184733 + RSINE1 SINE B4 8 130 -35 8 1023 367 288 7 43 chrX 57465608 57465746 -109184550 - L2a LINE L2 -18 3408 3276 8 1023 778 225 14 97 chrX 57465748 57465790 -109184506 + B3 SINE B2 2 43 -173 8 1023 225 0 0 0 chrX 57465790 57465815 -109184481 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 8 1023 950 70 78 0 chrX 57465815 57465943 -109184353 - B1_Mus2 SINE Alu -9 138 1 8 1023 778 225 14 97 chrX 57465943 57466106 -109184190 + B3 SINE B2 44 190 -26 8 1023 27 29 0 0 chrX 57466154 57466188 -109184108 + AT_rich Low_complexity Low_complexity 1 34 0 8 1023 579 273 83 20 chrX 57466298 57466623 -109183673 + ORR1E LTR MaLR 2 379 0 8 1023 26 0 0 0 chrX 57466919 57466945 -109183351 + AT_rich Low_complexity Low_complexity 1 26 0 8 1023 261 0 0 0 chrX 57466945 57466974 -109183322 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 1023 244 344 40 30 chrX 57466980 57467079 -109183217 - RSINE1 SINE B4 -63 102 3 8 1023 330 238 66 47 chrX 57467105 57467211 -109183085 - MTE2b LTR MaLR -2 377 270 8 1023 417 286 0 0 chrX 57467226 57467338 -109182958 - MTE2b LTR MaLR -189 190 79 8 1023 1089 64 76 13 chrX 57467341 57467488 -109182808 + B2_Mm2 SINE B2 1 158 -37 8 1023 459 0 0 0 chrX 57467488 57467539 -109182757 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 8 1023 298 268 22 44 chrX 57467552 57467642 -109182654 - MTE2b LTR MaLR -291 88 1 8 1023 206 338 0 0 chrX 57467642 57467716 -109182580 + L3 LINE CR1 4015 4088 -401 8 1023 310 308 95 81 chrX 57467904 57468187 -109182109 + ORR1E LTR MaLR 64 350 -9 8 1023 872 268 54 22 chrX 57468340 57468618 -109181678 - B4 SINE B4 -2 290 4 8 1023 437 89 0 15 chrX 57468706 57468774 -109181522 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 8 1023 243 299 60 0 chrX 57468775 57468842 -109181454 - RSINE1 SINE B4 -2 163 93 8 1023 1296 174 40 22 chrX 57468842 57469150 -109181146 + MTB_Mm LTR MaLR 1 298 -98 8 1023 4873 40 0 0 chrX 57469150 57469730 -109180566 - L1Md_T LINE L1 0 6582 6003 8 1023 1119 217 31 77 chrX 57469730 57469745 -109180551 + MTB_Mm LTR MaLR 299 309 -87 8 1023 478 222 11 0 chrX 57469749 57469839 -109180457 - RSINE1 SINE B4 -63 102 12 8 1023 493 298 6 112 chrX 57470108 57470278 -109180018 - ID_B1 SINE B4 -70 154 3 8 1023 2474 283 90 49 chrX 57470332 57471380 -109178916 + RMER15-int LTR ERVL 2762 3852 -1147 8 1023 265 234 104 0 chrX 57471628 57471705 -109178591 - L1MC4 LINE L1 -4 8038 7954 8 1023 751 272 6 6 chrX 57471749 57471908 -109178388 + ID_B1 SINE B4 1 159 -65 8 1023 505 305 109 0 chrX 57471905 57472033 -109178263 + RSINE1 SINE B4 18 159 -6 8 1023 242 148 144 10 chrX 57472051 57472108 -109178188 + B1F SINE Alu 68 122 -27 8 1023 3383 155 24 32 chrX 57472652 57473285 -109177011 - Lx3C LINE L1 -6 6970 6343 8 1023 5012 139 70 1 chrX 57473286 57474582 -109175714 + Lx3C LINE L1 4935 6319 -657 8 1023 1895 90 20 27 chrX 57475438 57475735 -109174561 + Lx3C LINE L1 6358 6652 -2 8 1023 814 192 27 0 chrX 57475747 57475893 -109174403 + B1_Mur4 SINE Alu 1 150 0 8 1023 901 8 131 0 chrX 57476074 57476196 -109174100 - BC1_Mm scRNA scRNA -14 138 1 8 1023 21 0 0 0 chrX 57476856 57476877 -109173419 + AT_rich Low_complexity Low_complexity 1 21 0 8 1023 212 208 42 0 chrX 57477273 57477321 -109172975 + (CAA)n Simple_repeat Simple_repeat 2 51 0 8 1023 250 263 0 0 chrX 57479336 57479393 -109170903 + (TATG)n Simple_repeat Simple_repeat 1 57 0 8 1023 21 0 0 0 chrX 57479435 57479456 -109170840 + AT_rich Low_complexity Low_complexity 1 21 0 8 1023 1650 27 0 0 chrX 57479516 57479702 -109170594 - B2_Mm1a SINE B2 -7 186 1 8 1023 554 241 0 0 chrX 57479726 57479834 -109170462 - PB1D9 SINE Alu -11 109 2 8 1023 732 252 31 100 chrX 57479837 57480066 -109170230 - B4 SINE B4 -65 227 15 8 1023 681 277 25 0 chrX 57480436 57480595 -109169701 - RSINE1 SINE B4 0 165 3 8 1023 21 0 0 0 chrX 57480632 57480653 -109169643 + AT_rich Low_complexity Low_complexity 1 21 0 8 1023 192 152 0 0 chrX 57483253 57483286 -109167010 + A-rich Low_complexity Low_complexity 1 33 0 8 1023 312 235 29 14 chrX 57484061 57484130 -109166166 + PB1 SINE Alu 1 70 -57 8 1023 1197 42 0 0 chrX 57485292 57485434 -109164862 - B1_Mus1 SINE Alu -5 143 2 8 1023 226 232 0 42 chrX 57485968 57486040 -109164256 - Lx8 LINE L1 -2 7471 7403 8 1023 1241 90 17 6 chrX 57486069 57486248 -109164048 - B2_Mm2 SINE B2 -14 181 1 8 1023 554 218 229 0 chrX 57486269 57486439 -109163857 - B3 SINE B2 -6 210 2 8 1023 1156 69 0 0 chrX 57487204 57487348 -109162948 + B1_Mus2 SINE Alu 2 145 -2 8 1023 484 299 120 6 chrX 57488192 57488350 -109161946 - ID_B1 SINE B4 -48 176 1 8 1023 602 291 60 6 chrX 57490037 57490220 -109160076 - MER44D DNA MER2_type -501 204 12 8 1023 869 131 50 3 chrX 57490294 57490466 -109159830 + B2_Mm2 SINE B2 1 191 -25 8 1023 1404 93 5 0 chrX 57490729 57490922 -109159374 - B2_Mm2 SINE B2 -1 194 1 8 1023 393 202 67 0 chrX 57490976 57491065 -109159231 - ID_B1 SINE B4 -11 213 119 8 1023 803 186 169 0 chrX 57491102 57491285 -109159011 - URR1A DNA MER1_type 0 226 13 8 1023 1111 48 11 57 chrX 57492535 57492712 -109157584 - L1Md_F2 LINE L1 0 6582 6414 8 1023 22 0 0 0 chrX 57492721 57492743 -109157553 + AT_rich Low_complexity Low_complexity 1 22 0 8 1023 920 248 10 10 chrX 57492753 57492961 -109157335 + B3 SINE B2 3 210 -6 8 1023 503 232 159 88 chrX 57493068 57493238 -109157058 - B3A SINE B2 -13 182 1 8 1023 195 204 0 0 chrX 57493428 57493482 -109156814 + T-rich Low_complexity Low_complexity 1 54 0 8 1023 261 244 0 0 chrX 57493521 57493607 -109156689 + GA-rich Low_complexity Low_complexity 4 89 0 8 1023 378 0 0 0 chrX 57495447 57495489 -109154807 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 8 1023 391 273 106 0 chrX 57496276 57496474 -109153822 + L1MA4 LINE L1 6064 6282 -18 8 1023 368 287 46 0 chrX 57496476 57496584 -109153712 - MER5B DNA MER1_type -46 132 20 8 1023 575 168 167 8 chrX 57496655 57496781 -109153515 + B1_Mur2 SINE Alu 1 146 -3 8 1023 302 364 83 17 chrX 57498192 57498312 -109151984 + B1F SINE Alu 1 128 -21 8 1023 450 286 86 6 chrX 57498877 57499039 -109151257 + MER90a LTR ERV1 440 614 0 8 1023 680 285 59 43 chrX 57499180 57499367 -109150929 - B3A SINE B2 -12 204 15 8 1023 22 0 0 0 chrX 57499383 57499405 -109150891 + AT_rich Low_complexity Low_complexity 1 22 0 8 1023 21 71 0 0 chrX 57500715 57500757 -109149539 + AT_rich Low_complexity Low_complexity 1 42 0 1 1023 367 331 92 0 chrX 57501361 57501491 -109148805 - B1F SINE Alu -7 142 1 2 1023 1963 134 64 24 chrX 57501620 57501994 -109148302 - L1_Mur3 LINE L1 -786 5094 4706 3 1023 18661 80 13 5 chrX 57501993 57505468 -109144828 + L1VL4 LINE L1 1 3502 -57 4 1023 4269 158 64 45 chrX 57505468 57505760 -109144536 - L1_Mur3 LINE L1 -1160 4720 4424 3 1023 775 184 13 33 chrX 57505760 57505912 -109144384 - B1_Mur4 SINE Alu -1 149 1 5 1023 4269 158 64 45 chrX 57505912 57506550 -109143746 - L1_Mur3 LINE L1 -1457 4423 3772 3 1023 360 306 28 0 chrX 57506621 57506729 -109143567 + PB1D7 SINE Alu 1 111 -9 6 1023 346 277 125 0 chrX 57507000 57507112 -109143184 + B3A SINE B2 57 182 -16 7 1023 271 224 82 13 chrX 57507668 57507826 -109142470 - RMER17C LTR ERVK -133 277 109 8 1023 21 0 0 0 chrX 57507830 57507851 -109142445 + AT_rich Low_complexity Low_complexity 1 21 0 9 1023 378 0 0 0 chrX 57508036 57508078 -109142218 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1023 451 274 35 62 chrX 57508079 57508192 -109142104 - B1_Mus1 SINE Alu -38 110 1 1 1023 319 311 49 33 chrX 57508997 57509124 -109141172 + L1MEg LINE L1 910 1040 -5202 1 1023 1378 85 5 21 chrX 57509124 57509316 -109140980 + B2_Mm1t SINE B2 1 189 -4 1 1023 319 311 49 33 chrX 57509316 57509371 -109140925 + L1MEg LINE L1 1041 1095 -5147 1 1023 1864 128 32 16 chrX 57509502 57509811 -109140485 + ORR1A2 LTR MaLR 1 314 -13 1 1023 224 211 0 0 chrX 57509921 57509959 -109140337 + PB1D9 SINE Alu 76 113 -7 1 1023 315 0 0 0 chrX 57509962 57509997 -109140299 + (TTA)n Simple_repeat Simple_repeat 1 35 0 1 1023 214 231 0 0 chrX 57509997 57510036 -109140260 + (CAG)n Simple_repeat Simple_repeat 3 41 0 1 1023 216 197 30 15 chrX 57510020 57510087 -109140209 + A-rich Low_complexity Low_complexity 5 72 0 1 1023 327 223 87 40 chrX 57510090 57510261 -109140035 + L1MEg LINE L1 2860 3024 -2823 1 1023 582 323 5 92 chrX 57510269 57510487 -109139809 + ID_B1 SINE B4 26 224 0 1 1023 369 279 148 0 chrX 57510600 57510722 -109139574 + B1_Mur2 SINE Alu 4 143 -6 2 1023 598 196 0 0 chrX 57510728 57510835 -109139461 + U6 snRNA snRNA 1 107 0 2 1023 5970 191 127 41 chrX 57510857 57512151 -109138145 + Lx9 LINE L1 5501 6962 -682 2 1023 1098 88 0 0 chrX 57512151 57512299 -109137997 + B1_Mus1 SINE Alu 1 148 0 2 1023 5970 205 138 48 chrX 57512299 57512773 -109137523 + Lx9 LINE L1 6963 7461 -183 2 1023 270 0 0 0 chrX 57512786 57512816 -109137480 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1023 309 158 0 0 chrX 57512820 57512877 -109137419 + Lx9 LINE L1 7581 7637 -7 2 1023 307 250 28 57 chrX 57512881 57512987 -109137309 + L1MEg LINE L1 3139 3241 -2905 1 1023 442 301 72 66 chrX 57513128 57513172 -109137124 + ID_B1 SINE B4 53 217 -4 2 1023 463 275 92 0 chrX 57513172 57513292 -109137004 + B1F1 SINE Alu 12 142 -7 2 1023 836 156 14 14 chrX 57514415 57514558 -109135738 + B1_Mur4 SINE Alu 5 147 -3 2 1023 227 204 0 0 chrX 57514559 57514608 -109135688 + A-rich Low_complexity Low_complexity 1 49 0 2 1023 1958 195 100 3 chrX 57515322 57515713 -109134583 + Lx5 LINE L1 6620 7048 -2 2 1023 573 296 6 95 chrX 57517009 57517062 -109133234 + RSINE1 SINE B4 5 52 -113 3 1023 8663 15 4 0 chrX 57517062 57518052 -109132244 + L1Md_T LINE L1 5589 6582 0 3 1023 573 296 6 95 chrX 57518052 57518166 -109132130 + RSINE1 SINE B4 53 157 -8 3 1023 820 221 6 12 chrX 57519310 57519479 -109130817 + B3 SINE B2 49 216 0 3 1023 608 246 7 7 chrX 57520129 57520268 -109130028 - ID_B1 SINE B4 0 224 86 3 1023 1464 28 17 11 chrX 57520493 57520673 -109129623 + B2_Mm2 SINE B2 1 181 -14 3 1023 257 246 29 71 chrX 57520707 57520777 -109129519 - RSINE1 SINE B4 -6 159 93 3 1023 904 65 14 14 chrX 57521267 57521408 -109128888 + (TTTC)n Simple_repeat Simple_repeat 2 142 0 3 1023 987 61 53 0 chrX 57521408 57521539 -109128757 - B1_Mus1 SINE Alu -9 139 2 3 1023 27 49 0 0 chrX 57521596 57521637 -109128659 + AT_rich Low_complexity Low_complexity 1 41 0 3 1023 783 223 83 22 chrX 57522021 57522293 -109128003 + L1MA4 LINE L1 5587 5874 -426 3 1023 317 243 0 41 chrX 57522295 57522347 -109127949 + ORR1B1-int LTR MaLR 601 738 -769 4 1023 730 43 0 0 chrX 57522347 57522439 -109127857 + B1_Mus1 SINE Alu 1 92 -56 4 1023 257 233 27 0 chrX 57522472 57522545 -109127751 + L1MA4 LINE L1 6204 6278 -22 3 1023 422 195 26 0 chrX 57522593 57522670 -109127626 + ID4 SINE ID 2 80 -3 4 1023 626 240 14 7 chrX 57523391 57523538 -109126758 + B1_Mur1 SINE Alu 2 149 0 4 1023 2368 166 62 40 chrX 57523749 57524252 -109126044 + L1_Mur2 LINE L1 409 922 -6164 4 1023 8618 99 44 6 chrX 57524249 57525533 -109124763 + L1_Mur2 LINE L1 4422 5754 -123 4 1023 4755 91 6 1 chrX 57525533 57526182 -109124114 + L1_Mm LINE L1 5232 5883 0 4 1023 671 204 6 31 chrX 57526204 57526227 -109124069 + ID_B1 SINE B4 67 223 0 4 1023 1092 43 7 0 chrX 57526227 57526365 -109123931 + B1_Mm SINE Alu 9 147 0 4 1023 207 0 0 0 chrX 57526369 57526392 -109123904 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 4 1023 4785 86 5 0 chrX 57526392 57527030 -109123266 + L1_Mus1 LINE L1 5927 6567 0 4 1023 1007 110 14 0 chrX 57527071 57527216 -109123080 + B1_Mus1 SINE Alu 2 148 0 5 1023 1945 272 92 40 chrX 57527268 57527919 -109122377 + Lx8 LINE L1 6645 7329 -144 5 1023 191 103 0 25 chrX 57527923 57527963 -109122333 + (CAAAC)n Simple_repeat Simple_repeat 2 40 0 5 1023 804 286 15 25 chrX 57528201 57528405 -109121891 - B3 SINE B2 -6 210 9 5 1023 3129 96 95 6 chrX 57528442 57528924 -109121372 - L1_Mus3 LINE L1 -5 6633 6109 5 1023 942 172 211 47 chrX 57529445 57529763 -109120533 + Lx9 LINE L1 7242 7611 -33 5 1023 560 243 153 56 chrX 57530034 57530230 -109120066 - B3A SINE B2 0 216 2 5 1023 885 113 113 7 chrX 57534156 57534307 -109115989 + B2_Mm2 SINE B2 1 167 -28 5 1023 21 36 0 0 chrX 57535328 57535356 -109114940 + AT_rich Low_complexity Low_complexity 1 28 0 5 1023 480 375 0 0 chrX 57535387 57535531 -109114765 - RSINE1 SINE B4 -16 149 6 5 1023 538 366 43 21 chrX 57536280 57536562 -109113734 - B4 SINE B4 -4 288 1 6 1023 201 176 0 0 chrX 57537230 57537264 -109113032 + T-rich Low_complexity Low_complexity 1 34 0 6 1023 530 264 62 8 chrX 57537312 57537442 -109112854 + B1F SINE Alu 7 143 -6 6 1023 267 307 13 13 chrX 57537449 57537525 -109112771 + ID4_ SINE ID 4 79 -4 6 1023 717 264 149 12 chrX 57537862 57538206 -109112090 + MER21-int LTR ERV1 3746 4136 -55 6 1023 1519 349 65 19 chrX 57538296 57538932 -109111364 + MER21B LTR ERV1 5 669 -194 6 1023 1260 107 11 5 chrX 57539098 57539286 -109111010 + B2_Mm2 SINE B2 1 189 -6 6 1023 1878 154 65 3 chrX 57539525 57539863 -109110433 - RLTR15 LTR ERVK 0 359 1 6 1024 2062 43 12 0 chrX 57541170 57541427 -109108869 + L1Md_F3 LINE L1 6323 6582 -2 6 1024 861 227 43 19 chrX 57541701 57541912 -109108384 + B3 SINE B2 1 216 0 6 1024 261 274 44 92 chrX 57542209 57542340 -109107956 + PB1 SINE Alu 1 141 -8 6 1024 228 283 17 0 chrX 57542358 57542418 -109107878 + tRNA-Ala-GCY_ tRNA tRNA 8 68 -7 7 1024 363 282 32 57 chrX 57544380 57544504 -109105792 + ID_B1 SINE B4 87 207 -17 7 1024 192 167 0 0 chrX 57544514 57544562 -109105734 + CT-rich Low_complexity Low_complexity 2 49 0 7 1024 39 38 0 0 chrX 57544620 57544673 -109105623 + AT_rich Low_complexity Low_complexity 1 53 0 7 1024 260 331 87 33 chrX 57544817 57545001 -109105295 + MIRb SINE MIR 75 268 0 7 1024 26 0 0 0 chrX 57545310 57545336 -109104960 + AT_rich Low_complexity Low_complexity 1 26 0 7 1024 340 247 9 93 chrX 57546278 57546385 -109103911 - RSINE1 SINE B4 -3 162 65 7 1024 641 62 0 0 chrX 57546386 57546483 -109103813 + L1Md_F2 LINE L1 6474 6570 -12 7 1024 21 0 0 0 chrX 57546988 57547009 -109103287 + AT_rich Low_complexity Low_complexity 1 21 0 7 1024 883 149 13 33 chrX 57547207 57547360 -109102936 - B1_Mur4 SINE Alu 0 150 1 7 1024 1142 75 0 0 chrX 57547530 57547677 -109102619 + B1_Mm SINE Alu 1 147 0 8 1024 23 54 0 0 chrX 57548492 57548529 -109101767 + AT_rich Low_complexity Low_complexity 1 37 0 8 1024 495 0 0 0 chrX 57548914 57548969 -109101327 + (TG)n Simple_repeat Simple_repeat 2 56 0 8 1024 789 41 0 0 chrX 57549353 57549450 -109100846 + (TCTA)n Simple_repeat Simple_repeat 1 97 0 8 1024 777 274 30 5 chrX 57549450 57549652 -109100644 - B3 SINE B2 -9 207 1 8 1024 222 290 71 14 chrX 57549786 57549856 -109100440 + ID4_ SINE ID 10 83 0 8 1024 1621 33 43 0 chrX 57551239 57551449 -109098847 + L1Md_F3 LINE L1 6366 6584 0 8 1024 19248 149 92 7 chrX 57551659 57555677 -109094619 + L1_Mur2 LINE L1 938 5299 -578 8 1024 1169 55 0 0 chrX 57555677 57555823 -109094473 + B1_Mm SINE Alu 2 147 0 8 1024 1918 105 204 3 chrX 57555823 57556147 -109094149 + L1_Mus3 LINE L1 5904 6280 -358 8 1024 485 206 185 34 chrX 57556142 57556288 -109094008 + L1MC1 LINE L1 6014 6181 -152 9 1024 257 186 0 63 chrX 57556346 57556409 -109093887 + L1MC1 LINE L1 6275 6333 0 9 1024 601 271 127 3 chrX 57556519 57556819 -109093477 + L1MB5 LINE L1 5532 5868 -306 9 1024 566 202 143 0 chrX 57557047 57557166 -109093130 - B1_Mur4 SINE Alu -10 140 5 9 1024 293 296 68 0 chrX 57557232 57557320 -109092976 + RSINE1 SINE B4 41 134 -31 9 1024 270 0 0 0 chrX 57557324 57557354 -109092942 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 1024 1037 184 34 14 chrX 57557827 57558036 -109092260 - B3 SINE B2 0 216 4 9 1024 1185 182 46 11 chrX 57559088 57559230 -109091066 - RMER1A Other Other -2 1028 875 9 1024 252 0 0 0 chrX 57559230 57559258 -109091038 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 1024 1185 182 46 11 chrX 57559258 57559376 -109090920 - RMER1A Other Other -156 874 760 9 1024 1863 211 42 5 chrX 57559369 57559750 -109090546 - RMER1A Other Other -491 539 145 9 1024 192 231 0 0 chrX 57559755 57559807 -109090489 + (TCCG)n Simple_repeat Simple_repeat 2 53 0 9 1024 704 215 58 0 chrX 57559839 57559960 -109090336 - B3 SINE B2 -86 130 3 9 1024 502 54 27 0 chrX 57560111 57560185 -109090111 + (CA)n Simple_repeat Simple_repeat 2 77 0 1 1024 25 0 0 0 chrX 57560557 57560582 -109089714 + AT_rich Low_complexity Low_complexity 1 25 0 1 1024 303 347 157 0 chrX 57561051 57561198 -109089098 - L2 LINE L2 -620 2799 2630 1 1024 1532 35 35 0 chrX 57561299 57561497 -109088799 + L1Md_F2 LINE L1 6366 6570 -12 1 1024 186 43 0 0 chrX 57561502 57561525 -109088771 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 1 1024 28 29 0 0 chrX 57563101 57563136 -109087160 + AT_rich Low_complexity Low_complexity 1 35 0 1 1024 17490 67 7 5 chrX 57563264 57566265 -109084031 - L1Md_F2 LINE L1 -3 6579 3574 1 1024 3236 46 5 2 chrX 57566329 57566724 -109083572 + MTA_Mm LTR MaLR 1 396 0 1 1024 4088 53 0 2 chrX 57567422 57567928 -109082368 - L1Md_F2 LINE L1 -3 6579 6075 1 1024 33 43 0 0 chrX 57567981 57568028 -109082268 + AT_rich Low_complexity Low_complexity 1 47 0 1 1024 495 304 0 42 chrX 57568052 57568196 -109082100 - RSINE1 SINE B4 -24 141 4 1 1024 186 0 57 29 chrX 57568298 57568333 -109081963 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1 1024 1109 210 104 32 chrX 57568342 57568671 -109081625 + MTD LTR MaLR 10 405 -14 1 1024 298 231 15 0 chrX 57568802 57568867 -109081429 + B1_Mur4 SINE Alu 20 85 -65 1 1024 222 37 0 0 chrX 57568884 57568911 -109081385 + (CCAA)n Simple_repeat Simple_repeat 2 28 0 1 1024 406 263 30 10 chrX 57569563 57569663 -109080633 - PB1D7 SINE Alu -3 117 16 1 1024 892 117 14 28 chrX 57569855 57569996 -109080300 + B2_Mm2 SINE B2 2 140 -55 1 1024 234 0 0 0 chrX 57570005 57570031 -109080265 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 1024 320 271 0 0 chrX 57570294 57570364 -109079932 - B3 SINE B2 -2 214 145 1 1024 461 287 42 7 chrX 57570968 57571112 -109079184 + B1F1 SINE Alu 1 149 0 1 1024 676 248 0 0 chrX 57571392 57571521 -109078775 + B1_Mur2 SINE Alu 1 129 -20 1 1024 222 319 137 14 chrX 57571632 57571685 -109078611 + B1_Mus1 SINE Alu 1 54 -94 1 1024 276 30 0 0 chrX 57571685 57571718 -109078578 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1024 222 319 137 14 chrX 57571718 57571737 -109078559 + B1_Mus1 SINE Alu 55 82 -66 1 1024 4218 181 48 7 chrX 57573752 57574600 -109075696 + Lx4B LINE L1 6176 7058 0 1 1024 388 315 67 24 chrX 57575126 57575334 -109074962 + LTR48B LTR ERV1 242 458 -186 1 1024 2932 57 42 3 chrX 57575334 57575719 -109074577 + MTB LTR MaLR 1 400 0 1 1024 212 273 270 11 chrX 57575747 57575836 -109074460 + PB1D7 SINE Alu 9 120 0 1 1024 22 0 0 0 chrX 57576114 57576136 -109074160 + AT_rich Low_complexity Low_complexity 1 22 0 1 1024 535 42 0 0 chrX 57576378 57576449 -109073847 + B1_Mus2 SINE Alu 77 147 0 1 1024 370 96 14 14 chrX 57576449 57576523 -109073773 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 1024 4906 148 54 39 chrX 57576579 57578476 -109071820 + Lx3_Mus LINE L1 3175 6824 -185 1 1024 3745 71 0 16 chrX 57578476 57578975 -109071321 + L1Md_F2 LINE L1 6082 6572 -10 1 1024 3626 236 89 90 chrX 57578975 57579493 -109070803 + Lx3_Mus LINE L1 5072 5587 -296 1 1024 7856 55 8 2 chrX 57579493 57580482 -109069814 + L1Md_F2 LINE L1 5588 6582 0 1 1024 3626 97 30 8359 chrX 57580482 57580649 -109069647 + Lx3_Mus LINE L1 5588 5592 -291 1 1024 288 0 0 0 chrX 57580649 57580681 -109069615 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1 1024 297 0 0 0 chrX 57581189 57581222 -109069074 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1024 770 216 125 10 chrX 57582053 57582245 -109068051 + B3 SINE B2 1 214 -2 1 1024 1019 75 8 0 chrX 57582668 57582802 -109067494 - B1_Mus1 SINE Alu -12 136 2 1 1024 1363 89 21 0 chrX 57584224 57584414 -109065882 + B2_Mm2 SINE B2 2 195 0 1 1024 430 206 134 0 chrX 57584470 57584567 -109065729 - B1_Mur1 SINE Alu -1 148 39 1 1024 372 192 13 52 chrX 57585089 57585166 -109065130 + ID2 SINE ID 6 79 -4 1 1024 518 236 39 31 chrX 57585910 57586037 -109064259 - B1_Mur1 SINE Alu -5 144 17 1 1024 749 275 19 9 chrX 57586073 57586286 -109064010 - B3 SINE B2 0 216 2 1 1024 581 236 23 0 chrX 57586323 57586480 -109063816 - B3 SINE B2 -10 206 2 1 1024 27 29 0 0 chrX 57586573 57586607 -109063689 + AT_rich Low_complexity Low_complexity 1 34 0 1 1024 9716 76 31 6 chrX 57586681 57588592 -109061704 + Lx3_Mus LINE L1 5039 7004 -5 1 1024 267 306 72 0 chrX 57588693 57588804 -109061492 - MER103 DNA DNA -47 119 1 1 1024 26 0 0 0 chrX 57589856 57589882 -109060414 + AT_rich Low_complexity Low_complexity 1 26 0 1 1024 1613 235 157 21 chrX 57589926 57590046 -109060250 + Lx6 LINE L1 6757 6914 -546 1 1024 369 0 0 0 chrX 57590046 57590087 -109060209 + (CTG)n Simple_repeat Simple_repeat 1 41 0 1 1024 1613 235 157 21 chrX 57590087 57590436 -109059860 + Lx6 LINE L1 6915 7290 -170 1 1024 666 224 11 101 chrX 57590430 57590609 -109059687 + Lx6 LINE L1 6638 6800 -660 1 1024 232 189 0 0 chrX 57590579 57590616 -109059680 + Lx5 LINE L1 6455 6491 -559 1 1024 1339 216 69 92 chrX 57590615 57591095 -109059201 - Lx7 LINE L1 -7 7689 7221 1 1024 286 275 75 0 chrX 57591515 57591595 -109058701 + RSINE1 SINE B4 72 157 -8 1 1024 3405 97 12 4 chrX 57591689 57592178 -109058118 - L1_Mus4 LINE L1 0 6636 6144 1 1024 180 320 66 13 chrX 57592189 57592265 -109058031 - L2c LINE L2 -19 3368 3289 1 1024 189 0 0 0 chrX 57592301 57592322 -109057974 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1024 225 0 0 0 chrX 57592659 57592684 -109057612 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 1024 639 53 0 52 chrX 57592686 57592802 -109057494 - B1_Mus2 SINE Alu 0 149 40 1 1024 441 320 16 24 chrX 57592801 57592926 -109057370 - ID_B1 SINE B4 -22 202 79 1 1024 855 164 0 7 chrX 57593009 57593144 -109057152 - B1_Mur4 SINE Alu -16 134 1 1 1024 465 267 91 37 chrX 57593253 57593440 -109056856 + B3A SINE B2 2 198 0 1 1024 565 249 100 95 chrX 57594131 57594331 -109055965 - B3 SINE B2 -2 214 14 1 1024 246 284 26 51 chrX 57594580 57594658 -109055638 + PB1D9 SINE Alu 7 82 -38 1 1024 769 249 148 27 chrX 57594659 57594915 -109055381 + B4 SINE B4 2 288 -4 1 1024 435 87 0 0 chrX 57594938 57595007 -109055289 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 1024 1167 82 110 0 chrX 57595085 57595267 -109055029 + L1_Mus1 LINE L1 6366 6567 0 1 1024 185 140 0 57 chrX 57595271 57595324 -109054972 + A-rich Low_complexity Low_complexity 1 50 0 1 1024 4441 174 45 66 chrX 57595812 57596725 -109053571 + RMER19B LTR ERVK 3 896 -6 1 1024 541 273 278 31 chrX 57597125 57597352 -109052944 - B4A SINE B4 -8 284 2 1 1024 389 345 27 27 chrX 57597500 57597634 -109052662 + MIR SINE MIR 16 150 -112 1 1024 1005 234 34 0 chrX 57597634 57597843 -109052453 + B3 SINE B2 1 216 0 1 1024 389 345 27 27 chrX 57597843 57597857 -109052439 + MIR SINE MIR 151 164 -98 1 1024 1063 263 46 36 chrX 57598232 57598512 -109051784 - B4 SINE B4 -4 288 6 1 1024 180 390 0 0 chrX 57599175 57599234 -109051062 + MIR3 SINE MIR 113 171 -37 1 1024 640 139 108 14 chrX 57599935 57600074 -109050222 + Lx5 LINE L1 6897 7048 -2 1 1024 843 176 0 7 chrX 57600101 57600238 -109050058 + B1_Mur3 SINE Alu 1 136 -13 1 1024 210 71 0 0 chrX 57600238 57600266 -109050030 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 1024 221 241 19 0 chrX 57600560 57600614 -109049682 + B1_Mus2 SINE Alu 72 126 -21 1 1024 186 133 0 0 chrX 57601083 57601113 -109049183 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 1 1024 275 26 51 0 chrX 57601499 57601538 -109048758 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 1 1024 459 276 14 3 chrX 57601637 57601746 -109048550 - B1F SINE Alu 0 150 33 1 1024 771 201 0 20 chrX 57602579 57602731 -109047565 - B1_Mur2 SINE Alu 0 149 1 1 1024 332 312 15 66 chrX 57602906 57603043 -109047253 + L2a LINE L2 3295 3424 -2 1 1024 313 281 77 19 chrX 57603725 57603881 -109046415 - L1MB8 LINE L1 -6 6172 6008 1 1024 537 268 88 21 chrX 57603929 57604206 -109046090 + L1MA5 LINE L1 5699 5992 -299 1 1024 619 244 39 0 chrX 57604558 57604685 -109045611 - B3 SINE B2 -6 210 79 1 1024 429 242 241 32 chrX 57605172 57605330 -109044966 - B3 SINE B2 -6 210 20 1 1024 1483 288 132 20 chrX 57605357 57606108 -109044188 + Lx9 LINE L1 6781 7615 -29 1 1024 21 57 0 0 chrX 57606150 57606185 -109044111 + AT_rich Low_complexity Low_complexity 1 35 0 1 1024 1148 75 0 0 chrX 57606908 57607054 -109043242 + B1_Mus2 SINE Alu 1 146 -1 1 1024 795 224 66 20 chrX 57607142 57607338 -109042958 + B3 SINE B2 3 207 -9 1 1024 504 326 36 0 chrX 57607427 57607565 -109042731 - B1F SINE Alu -6 143 1 1 1024 428 296 0 17 chrX 57608173 57608290 -109042006 + PB1D10 SINE Alu 1 115 -2 1 1024 403 266 24 54 chrX 57608726 57608893 -109041403 + L1MB1 LINE L1 5618 5779 -410 1 1024 316 347 0 30 chrX 57608900 57609001 -109041295 + PB1D7 SINE Alu 10 107 -13 1 1024 249 347 13 13 chrX 57609033 57609048 -109041248 + B4 SINE B4 74 88 -204 1 1024 375 262 12 12 chrX 57609048 57609129 -109041167 + B1_Mur3 SINE Alu 3 83 -66 1 1024 549 271 89 31 chrX 57609130 57609355 -109040941 + L1MB1 LINE L1 5894 6131 -37 1 1024 278 274 105 23 chrX 57609367 57609453 -109040843 + PB1D10 SINE Alu 25 117 0 1 1024 353 233 23 0 chrX 57609504 57609590 -109040706 + Lx9 LINE L1 7386 7473 -171 1 1024 395 152 30 0 chrX 57609858 57609924 -109040372 + B1_Mur4 SINE Alu 29 96 -54 1 1024 375 213 214 32 chrX 57609984 57610110 -109040186 - B1_Mur3 SINE Alu 0 149 1 1 1024 553 270 106 78 chrX 57610118 57610335 -109039961 - ID_B1 SINE B4 -1 223 1 2 1024 246 95 0 0 chrX 57610351 57610393 -109039903 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 2 1024 371 275 52 30 chrX 57610393 57610528 -109039768 - B1F SINE Alu -11 138 1 2 1024 379 242 85 5 chrX 57610891 57611003 -109039293 - B1F SINE Alu -1 148 31 2 1024 203 125 0 24 chrX 57611053 57611094 -109039202 + (GGGAA)n Simple_repeat Simple_repeat 5 44 0 2 1024 870 242 73 10 chrX 57611116 57611308 -109038988 + B3 SINE B2 7 210 -6 2 1024 640 247 37 11 chrX 57611329 57611493 -109038803 - B3A SINE B2 -50 166 1 2 1024 471 290 14 58 chrX 57611519 57611658 -109038638 - B1_Mur1 SINE Alu -9 140 8 2 1024 758 171 42 21 chrX 57611841 57611984 -109038312 + B1_Mur3 SINE Alu 2 147 -2 2 1024 450 0 0 0 chrX 57611998 57612048 -109038248 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1024 586 231 72 29 chrX 57612057 57612266 -109038030 + Lx8 LINE L1 7200 7417 -56 2 1024 5033 198 6 138 chrX 57612315 57612770 -109037526 + L1_Mur3 LINE L1 4483 4852 -1028 2 1024 790 27 182 0 chrX 57612770 57612880 -109037416 - B1_Mus1 SINE Alu 0 148 19 2 1024 5033 198 6 138 chrX 57612880 57612960 -109037336 + L1_Mur3 LINE L1 4853 4918 -962 2 1024 2825 59 3 0 chrX 57612960 57613318 -109036978 - L1_Mus1 LINE L1 0 6567 6209 2 1024 7261 90 12 1 chrX 57613318 57615005 -109035291 + L1_Mus3 LINE L1 4923 6628 -10 2 1024 225 0 0 0 chrX 57615005 57615030 -109035266 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 1024 341 73 0 0 chrX 57615030 57615085 -109035211 + Lx LINE L1 6594 6648 -6 2 1024 434 247 20 7 chrX 57615086 57615233 -109035063 + L1MB3 LINE L1 6033 6181 -2 2 1024 577 294 7 7 chrX 57615241 57615378 -109034918 + ID_B1 SINE B4 81 217 -7 2 1024 180 0 0 0 chrX 57615386 57615406 -109034890 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 2 1024 605 267 16 71 chrX 57615439 57615638 -109034658 - B3A SINE B2 0 198 13 2 1024 298 350 89 13 chrX 57615709 57615934 -109034362 + MIR SINE MIR 14 252 -16 2 1024 528 261 61 40 chrX 57616180 57616195 -109034101 + ID_B1 SINE B4 68 218 -6 2 1024 822 196 15 0 chrX 57616195 57616328 -109033968 + B1_Mur1 SINE Alu 9 143 -6 2 1024 440 205 0 12 chrX 57616353 57616437 -109033859 + B1_Mur3 SINE Alu 1 83 -66 2 1024 327 184 30 121 chrX 57616362 57616461 -109033835 + MT2B LTR ERVL 174 263 -338 2 1024 302 71 18 0 chrX 57616481 57616537 -109033759 + L1Md_F2 LINE L1 6525 6581 -1 2 1024 183 295 24 71 chrX 57616584 57616668 -109033628 - L2 LINE L2 -925 2494 2415 2 1024 342 291 26 35 chrX 57616687 57616801 -109033495 - Tigger16a DNA Tigger -435 498 386 2 1024 857 145 70 70 chrX 57616896 57617056 -109033240 + B2_Mm2 SINE B2 5 166 -29 2 1024 405 0 0 0 chrX 57617056 57617101 -109033195 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 1024 857 145 70 70 chrX 57617101 57617125 -109033171 + B2_Mm2 SINE B2 167 189 -6 2 1024 729 93 0 0 chrX 57617664 57617772 -109032524 + L1Md_F2 LINE L1 6462 6569 -13 2 1024 271 315 26 53 chrX 57617819 57617933 -109032363 - MIRb SINE MIR -29 239 129 2 1024 212 162 0 26 chrX 57618580 57618618 -109031678 + GA-rich Low_complexity Low_complexity 5 41 0 2 1024 3643 27 0 0 chrX 57618906 57619352 -109030944 + L1Md_F2 LINE L1 5140 5585 -298 2 1024 8416 34 1 9 chrX 57619353 57620356 -109029940 + L1Md_F2 LINE L1 5587 6581 -1 2 1024 1157 62 0 0 chrX 57620994 57621140 -109029156 - B1_Mus2 SINE Alu -1 146 1 2 1024 427 287 0 0 chrX 57621323 57621417 -109028879 + ID_B1 SINE B4 121 214 -10 2 1024 1041 101 76 0 chrX 57621417 57621575 -109028721 + B2_Mm1t SINE B2 2 171 -22 2 1024 446 54 301 9 chrX 57621607 57621715 -109028581 + B2_Mm2 SINE B2 47 189 -6 2 1024 426 335 101 0 chrX 57621853 57622011 -109028285 + ID_B1 SINE B4 23 196 -28 2 1024 727 161 11 60 chrX 57623116 57623271 -109027025 + B1_Mur4 SINE Alu 1 144 -6 2 1024 340 268 0 44 chrX 57623566 57623656 -109026640 + B1F SINE Alu 56 141 -8 2 1024 1390 57 0 77 chrX 57623878 57624087 -109026209 - B2_Mm2 SINE B2 -2 193 1 2 1024 730 332 79 53 chrX 57624091 57624155 -109026141 + L1M4 LINE L1 4622 4676 -1470 2 1024 381 235 12 0 chrX 57624155 57624236 -109026060 - ID4_ SINE ID 0 83 2 2 1024 730 332 79 53 chrX 57624236 57624740 -109025556 + L1M4 LINE L1 4677 5205 -941 2 1024 269 226 177 0 chrX 57624760 57624822 -109025474 + RSINE1 SINE B4 9 81 -84 2 1024 383 263 152 13 chrX 57624868 57625026 -109025270 + L1MC LINE L1 5178 5357 -789 2 1024 397 164 0 15 chrX 57625249 57625317 -109024979 + B3 SINE B2 2 68 -148 2 1024 231 111 56 0 chrX 57625311 57625347 -109024949 + B1_Mur2 SINE Alu 97 134 -15 2 1024 216 0 0 0 chrX 57625350 57625374 -109024922 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 2 1024 263 270 34 59 chrX 57625446 57625564 -109024732 + MT2B LTR ERVL 119 233 -368 2 1024 398 276 93 16 chrX 57625497 57625626 -109024670 + B1F1 SINE Alu 6 144 -5 2 1024 655 321 63 26 chrX 57625634 57625903 -109024393 + B4A SINE B4 10 288 -4 2 1024 30 59 0 0 chrX 57626057 57626108 -109024188 + AT_rich Low_complexity Low_complexity 1 51 0 2 1024 620 199 39 8 chrX 57626925 57627052 -109023244 + B1_Mus2 SINE Alu 5 135 -12 2 1024 198 0 0 0 chrX 57627086 57627108 -109023188 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2 1024 1175 190 19 0 chrX 57627347 57627552 -109022744 - B3 SINE B2 -7 209 1 2 1024 328 272 48 0 chrX 57627692 57627795 -109022501 + L1MC3 LINE L1 7147 7254 -531 2 1024 852 248 160 21 chrX 57627808 57628169 -109022127 + MTD LTR MaLR 1 407 0 2 1024 620 264 195 8 chrX 57628174 57628563 -109021733 + L1MC3 LINE L1 7267 7728 -57 2 1024 941 220 73 5 chrX 57628612 57628804 -109021492 + B3 SINE B2 12 216 0 2 1024 546 181 70 8 chrX 57629487 57629615 -109020681 + Lx6 LINE L1 6595 6730 -730 2 1024 3787 171 43 83 chrX 57629730 57630725 -109019571 + Lx7 LINE L1 6742 7696 0 2 1024 296 323 41 41 chrX 57630944 57631041 -109019255 - MER5A DNA MER1_type -34 155 59 2 1024 216 268 118 59 chrX 57631156 57631291 -109019005 - L2a LINE L2 -1 3425 3283 2 1024 523 280 83 55 chrX 57632328 57632538 -109017758 + B3A SINE B2 1 216 0 2 1024 432 0 0 0 chrX 57632566 57632614 -109017682 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 2 1024 577 233 39 0 chrX 57633158 57633287 -109017009 - B1F SINE Alu -15 134 1 2 1024 273 267 105 38 chrX 57633831 57633936 -109016360 + L2a LINE L2 3284 3395 -31 2 1024 362 265 0 12 chrX 57634056 57634140 -109016156 + B1F1 SINE Alu 15 97 -52 2 1024 725 230 7 20 chrX 57634241 57634392 -109015904 + B1_Mur2 SINE Alu 1 149 0 2 1024 331 322 96 22 chrX 57634409 57634679 -109015617 + B4A SINE B4 1 290 -2 2 1024 180 283 0 0 chrX 57634897 57634943 -109015353 + L3 LINE CR1 855 900 -3589 2 1024 664 179 104 0 chrX 57635120 57635254 -109015042 - B1_Mur2 SINE Alu 0 149 2 2 1024 247 289 36 0 chrX 57635293 57635376 -109014920 + L1MD2 LINE L1 6069 6154 -205 2 1024 2822 87 39 15 chrX 57635637 57636048 -109014248 + L1Md_F2 LINE L1 6162 6582 0 2 1024 537 235 50 0 chrX 57636137 57636256 -109014040 + RSINE1 SINE B4 5 129 -36 2 1024 230 237 131 20 chrX 57636382 57636481 -109013815 - L1MD2 LINE L1 -181 6178 6069 2 1024 799 248 190 0 chrX 57636531 57636773 -109013523 + B4A SINE B4 1 288 -4 2 1024 708 218 98 7 chrX 57636850 57636993 -109013303 + B3A SINE B2 1 156 -42 2 1024 219 88 0 0 chrX 57637013 57637047 -109013249 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1024 601 269 11 34 chrX 57637860 57638037 -109012259 + B4A SINE B4 3 175 -117 2 1024 293 264 42 109 chrX 57638247 57638366 -109011930 + ID_B1 SINE B4 66 176 -48 2 1024 408 245 8 83 chrX 57638274 57638394 -109011902 + B1F1 SINE Alu 8 118 -2 2 1024 515 247 77 39 chrX 57638447 57638603 -109011693 + RSINE1 SINE B4 4 165 0 2 1024 813 239 221 25 chrX 57638634 57638951 -109011345 + MTEb LTR MaLR 1 379 0 2 1024 589 235 7 68 chrX 57639197 57639343 -109010953 + ID_B1 SINE B4 88 224 0 2 1024 564 216 159 20 chrX 57639343 57639494 -109010802 + B3 SINE B2 1 172 -44 2 1024 597 202 0 37 chrX 57639505 57639613 -109010683 + B1_Mur2 SINE Alu 37 140 -9 2 1024 605 244 186 0 chrX 57639882 57640092 -109010204 + B4A SINE B4 1 249 -43 2 1024 342 0 0 0 chrX 57640126 57640164 -109010132 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1024 21 0 0 0 chrX 57640262 57640283 -109010013 + AT_rich Low_complexity Low_complexity 1 21 0 2 1024 461 200 29 29 chrX 57640321 57640424 -109009872 + MTEb LTR MaLR 277 379 0 2 1024 346 250 73 118 chrX 57640506 57640710 -109009586 + B3A SINE B2 2 196 -2 2 1024 509 287 59 0 chrX 57640814 57640950 -109009346 - B1F2 SINE Alu 0 149 6 2 1024 332 195 33 89 chrX 57640995 57641085 -109009211 + MT2B LTR ERVL 156 240 -361 2 1024 610 160 144 0 chrX 57641006 57641131 -109009165 + B1_Mus1 SINE Alu 6 148 0 2 1024 1141 169 60 0 chrX 57641300 57641501 -109008795 + B3 SINE B2 4 216 0 2 1024 841 158 212 11 chrX 57641920 57642099 -109008197 - B3 SINE B2 0 216 2 2 1024 1054 124 5 73 chrX 57642110 57642302 -109007994 - B2_Mm1t SINE B2 0 193 15 2 1024 1140 82 0 7 chrX 57643282 57643430 -109006866 + B1_Mm SINE Alu 1 147 0 2 1024 375 346 38 0 chrX 57643568 57643701 -109006595 + B1F2 SINE Alu 12 149 0 3 1024 698 229 157 23 chrX 57643737 57644037 -109006259 + L1MB7 LINE L1 5570 5909 -275 3 1024 330 330 21 0 chrX 57644037 57644134 -109006162 - PB1D10 SINE Alu -18 99 1 3 1024 441 282 60 32 chrX 57644135 57644384 -109005912 + L1MB7 LINE L1 5910 6165 -19 3 1024 1069 259 53 63 chrX 57644708 57644992 -109005304 + B4 SINE B4 10 290 -2 3 1024 825 201 98 0 chrX 57645371 57645565 -109004731 + B3 SINE B2 2 214 -2 3 1024 22 0 0 0 chrX 57645872 57645894 -109004402 + AT_rich Low_complexity Low_complexity 1 22 0 3 1024 371 289 52 45 chrX 57645930 57646064 -109004232 + MLT1A0 LTR MaLR 1 135 -230 3 1024 341 278 171 17 chrX 57646140 57646257 -109004039 + ID_B1 SINE B4 80 214 -10 3 1024 279 0 0 0 chrX 57646486 57646517 -109003779 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1024 219 225 0 0 chrX 57646519 57646559 -109003737 + polypurine Low_complexity Low_complexity 3 42 0 3 1024 729 181 43 14 chrX 57646693 57646833 -109003463 - B1_Mm SINE Alu 0 147 4 3 1024 278 247 221 21 chrX 57646836 57646931 -109003365 - B4 SINE B4 -176 116 3 3 1024 533 229 35 14 chrX 57648179 57648321 -109001975 + B1F SINE Alu 5 149 0 3 1024 2378 60 16 6 chrX 57648408 57648726 -109001570 + L1_Mus1 LINE L1 6246 6566 -1 3 1024 1897 117 14 122 chrX 57648966 57649335 -109000961 + ORR1A4 LTR MaLR 1 329 0 3 1024 465 235 10 10 chrX 57650375 57650474 -108999822 + B3 SINE B2 113 211 -5 3 1024 568 238 57 0 chrX 57650498 57650620 -108999676 + B1_Mur1 SINE Alu 13 141 -8 3 1024 186 43 0 0 chrX 57650692 57650715 -108999581 + (CAGCG)n Simple_repeat Simple_repeat 1 23 0 3 1024 304 91 0 0 chrX 57651133 57651177 -108999119 + B2_Mm2 SINE B2 2 45 -150 3 1024 1203 48 0 0 chrX 57651178 57651325 -108998971 + B1_Mm SINE Alu 1 147 0 3 1024 180 77 0 0 chrX 57651325 57651351 -108998945 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 3 1024 524 56 0 0 chrX 57651351 57651422 -108998874 + B2_Mm2 SINE B2 27 97 -98 3 1024 240 104 21 0 chrX 57651522 57651570 -108998726 + B2_Mm1t SINE B2 144 192 -1 3 1024 478 259 30 15 chrX 57651617 57651750 -108998546 + B1F SINE Alu 1 135 -14 3 1024 218 347 20 39 chrX 57652143 57652245 -108998051 + L2a LINE L2 3322 3421 -5 3 1024 205 315 0 0 chrX 57652487 57652541 -108997755 - L2a LINE L2 -9 3417 3364 3 1024 236 304 31 15 chrX 57653692 57653728 -108996568 + B4A SINE B4 48 86 -138 3 1024 283 256 89 44 chrX 57653728 57653818 -108996478 + PB1D10 SINE Alu 3 96 -21 3 1024 589 281 20 20 chrX 57653828 57653977 -108996319 + B1_Mur2 SINE Alu 1 149 0 3 1024 1267 111 21 0 chrX 57653981 57654171 -108996125 + B2_Mm2 SINE B2 1 194 -1 3 1024 274 245 191 0 chrX 57654221 57654315 -108995981 + ID_B1 SINE B4 103 214 -10 3 1024 23 33 0 0 chrX 57656659 57656689 -108993607 + GC_rich Low_complexity Low_complexity 1 30 0 3 1024 247 180 12 53 chrX 57657114 57657284 -108993012 + (CCCG)n Simple_repeat Simple_repeat 3 165 0 3 1024 31 0 0 0 chrX 57657777 57657808 -108992488 + GC_rich Low_complexity Low_complexity 1 31 0 3 1024 182 62 31 0 chrX 57660759 57660791 -108989505 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1024 1021 73 0 0 chrX 57660794 57660930 -108989366 - B1_Mus2 SINE Alu -6 141 6 3 1024 512 223 39 0 chrX 57661565 57661668 -108988628 + PB1D7 SINE Alu 6 112 -8 3 1024 426 39 0 0 chrX 57662274 57662326 -108987970 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1024 806 337 56 91 chrX 57662465 57663128 -108987168 + HAL1 LINE L1 1680 2319 -188 3 1024 329 283 16 23 chrX 57663441 57663583 -108986713 + MTE2b LTR MaLR 270 405 -14 3 1024 363 352 93 23 chrX 57663880 57664095 -108986201 - MIRb SINE MIR -8 260 31 3 1024 1311 94 44 0 chrX 57664680 57664861 -108985435 + B2_Mm2 SINE B2 1 189 -6 3 1024 487 246 56 56 chrX 57664976 57665118 -108985178 + B1F SINE Alu 8 149 0 3 1024 450 0 0 0 chrX 57666122 57666172 -108984124 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1024 378 310 57 47 chrX 57666219 57666325 -108983971 - PB1D10 SINE Alu -208 106 1 3 1024 537 244 66 7 chrX 57667628 57667764 -108982532 - RMER5 LTR ERV1 0 534 391 3 1024 325 231 25 3 chrX 57667794 57667876 -108982420 + MTEb LTR MaLR 6 94 -325 3 1024 198 259 0 0 chrX 57668751 57668800 -108981496 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 3 1024 351 0 0 0 chrX 57668800 57668839 -108981457 + (TATG)n Simple_repeat Simple_repeat 2 40 0 3 1024 198 259 0 0 chrX 57668839 57668870 -108981426 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 3 1024 847 256 67 0 chrX 57668872 57669067 -108981229 - ID_B1 SINE B4 -15 209 2 3 1024 4475 76 0 3 chrX 57669094 57669672 -108980624 - L1_Mus2 LINE L1 0 6566 5991 3 1024 627 12 37 0 chrX 57669673 57669755 -108980541 + L1_Mus2 LINE L1 5901 5985 -581 3 1024 845 269 18 32 chrX 57669760 57669979 -108980317 - B3 SINE B2 0 216 1 3 1024 397 230 13 47 chrX 57670037 57670153 -108980143 - PB1D10 SINE Alu -2 115 1 3 1024 249 209 0 0 chrX 57670205 57670248 -108980048 - PB1D10 SINE Alu -7 110 68 3 1024 750 223 0 7 chrX 57670300 57670449 -108979847 - B1_Mur2 SINE Alu 0 149 2 3 1024 23 33 0 0 chrX 57670601 57670631 -108979665 + AT_rich Low_complexity Low_complexity 1 30 0 3 1024 402 113 0 0 chrX 57670678 57670740 -108979556 + B1_Mm SINE Alu 86 147 0 3 1024 213 65 0 0 chrX 57670743 57670774 -108979522 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1024 235 352 47 16 chrX 57671490 57671617 -108978679 - MER117 DNA MER1_type -61 136 6 3 15 1021 275 57 37 chrX 57671637 57671935 -108978361 + MTEb LTR MaLR 28 331 -48 3 1025 886 193 16 11 chrX 57672047 57672230 -108978066 - ORR1C1 LTR MaLR -194 184 1 3 1025 963 285 132 11 chrX 57672230 57672507 -108977789 - MTEa LTR MaLR -36 343 33 3 1025 236 320 28 55 chrX 57672591 57672700 -108977596 - MLT1M LTR MaLR -478 194 89 3 1025 303 235 217 13 chrX 57672796 57672947 -108977349 - MER53 DNA hAT -4 189 8 3 1025 23 0 0 0 chrX 57673580 57673603 -108976693 + AT_rich Low_complexity Low_complexity 1 23 0 3 1025 5489 215 48 30 chrX 57673614 57675023 -108975273 - Lx7 LINE L1 -337 7359 5926 3 1025 1097 80 0 0 chrX 57675051 57675188 -108975108 - B1_Mus2 SINE Alu -10 137 1 3 1025 1051 84 90 6 chrX 57675193 57675360 -108974936 - B2_Mm2 SINE B2 -6 189 9 3 1025 2391 136 38 10 chrX 57675370 57675764 -108974532 - MTB_Mm LTR MaLR 0 407 3 3 1025 697 95 25 17 chrX 57675768 57675886 -108974410 - Lx6 LINE L1 -1537 5923 5805 3 1025 2995 145 36 194 chrX 57675872 57676313 -108973983 - Lx6 LINE L1 -180 5700 5271 3 1025 3850 200 44 48 chrX 57676313 57677221 -108973075 + RMER13B LTR ERVK 1 904 -4 3 1025 2995 145 36 194 chrX 57677221 57677258 -108973038 - Lx6 LINE L1 -610 5270 5239 3 1025 591 107 0 0 chrX 57677258 57677342 -108972954 - B2_Mm2 SINE B2 -111 84 1 3 1025 2995 145 36 194 chrX 57677342 57677704 -108972592 - Lx6 LINE L1 -610 5238 4922 3 1025 490 165 41 11 chrX 57677704 57677810 -108972486 - MT2B LTR ERVL -477 107 1 3 1025 337 178 13 40 chrX 57677848 57677924 -108972372 - ORR1A3-int LTR MaLR -1323 640 567 3 1025 3200 112 442 5 chrX 57677926 57678031 -108972265 - MERVL_2A-int LTR ERVL -135 5626 5484 3 1025 476 216 205 50 chrX 57678031 57678192 -108972104 - B2_Mm1t SINE B2 -7 186 1 3 1025 3200 145 92 16 chrX 57678192 57678994 -108971302 - MERVL_2A-int LTR ERVL -278 5483 4612 3 1025 846 217 43 37 chrX 57679948 57680135 -108970161 + B3 SINE B2 21 208 -8 3 1025 3207 46 5 5 chrX 57680450 57680846 -108969450 + MTA_Mm LTR MaLR 1 396 0 3 1025 8117 64 27 3 chrX 57680846 57681918 -108968378 + MTA_Mm-int LTR MaLR 1 1098 0 3 1025 3197 24 42 0 chrX 57681918 57682298 -108967998 + MTA_Mm LTR MaLR 1 396 0 3 1025 18025 137 21 19 chrX 57682959 57686291 -108964005 + L1_Mur1 LINE L1 2519 5857 -29 3 1025 2157 86 12 65 chrX 57686294 57686351 -108963945 - ORR1A2 LTR MaLR -8 319 271 3 1025 1187 20 7 27 chrX 57686351 57686501 -108963795 - B1_Mus2 SINE Alu 0 147 1 3 1025 2157 86 12 65 chrX 57686501 57686779 -108963517 - ORR1A2 LTR MaLR -57 270 2 3 1025 4706 161 13 14 chrX 57686781 57687693 -108962603 + Lx2B LINE L1 5850 6760 -240 3 1025 576 231 96 37 chrX 57687697 57687832 -108962464 - B3 SINE B2 -73 143 1 3 1025 557 291 33 16 chrX 57688116 57688298 -108961998 - MLT1A0 LTR MaLR -6 359 175 3 1025 232 353 59 0 chrX 57688616 57688684 -108961612 + ID SINE ID 1 72 -152 3 1025 27 0 0 0 chrX 57688686 57688713 -108961583 + AT_rich Low_complexity Low_complexity 1 27 0 3 1025 1145 181 44 5 chrX 57688716 57688921 -108961375 + B3 SINE B2 1 213 -3 3 1025 268 290 0 0 chrX 57688931 57689000 -108961296 + ID2 SINE ID 15 83 0 3 1025 251 224 82 0 chrX 57689480 57689565 -108960731 - L1_Mur2 LINE L1 -2949 2928 2837 3 1025 234 62 0 0 chrX 57690563 57690595 -108959701 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1025 235 295 0 0 chrX 57690649 57690710 -108959586 + Lx9 LINE L1 5846 5906 -1738 3 1025 195 42 0 0 chrX 57690764 57690788 -108959508 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1025 523 343 110 55 chrX 57690966 57691475 -108958821 + Lx8 LINE L1 6580 7116 -357 3 1025 739 236 0 7 chrX 57692169 57692318 -108957978 - B1_Mur3 SINE Alu -1 148 1 3 1025 207 0 0 0 chrX 57692318 57692341 -108957955 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1025 1032 230 0 5 chrX 57692428 57692638 -108957658 - B3 SINE B2 -6 210 2 3 1025 867 278 15 0 chrX 57692710 57692915 -108957381 + B3 SINE B2 1 208 -8 3 1025 556 327 74 35 chrX 57692990 57693193 -108957103 + B4A SINE B4 74 284 -8 3 1025 1127 66 0 0 chrX 57693511 57693647 -108956649 - B1_Mm SINE Alu -11 136 1 3 1025 22 0 0 0 chrX 57693657 57693679 -108956617 + AT_rich Low_complexity Low_complexity 1 22 0 3 1025 225 61 0 0 chrX 57693679 57693712 -108956584 + B1_Mus2 SINE Alu 115 147 0 3 1025 611 295 25 25 chrX 57693746 57693944 -108956352 - B3 SINE B2 -14 202 5 3 1025 371 129 0 41 chrX 57693954 57694027 -108956269 - L1Md_F2 LINE L1 -11 6571 6502 4 1025 356 22 0 0 chrX 57694262 57694307 -108955989 - L1Md_F2 LINE L1 -435 6147 6103 4 1025 5716 90 3 33 chrX 57694351 57696015 -108954281 + L1VL2 LINE L1 203 1807 -1808 4 1025 3284 106 20 2 chrX 57699033 57699536 -108950760 - L1VL2 LINE L1 -5540 795 284 4 1025 29 47 0 0 chrX 57699667 57699710 -108950586 + AT_rich Low_complexity Low_complexity 1 43 0 4 1025 305 109 0 0 chrX 57700014 57700060 -108950236 - B3 SINE B2 -10 206 161 4 1025 586 105 0 0 chrX 57700061 57700147 -108950149 + L1VL2 LINE L1 710 795 -5540 4 1025 665 278 28 7 chrX 57700164 57700309 -108949987 - B3 SINE B2 -67 149 2 4 1025 794 212 7 0 chrX 57700375 57700521 -108949775 - B1_Mur4 SINE Alu -2 148 2 4 1025 789 192 93 0 chrX 57700548 57700699 -108949597 + ORR1D1 LTR MaLR 1 165 -209 4 1025 324 0 0 0 chrX 57700707 57700743 -108949553 + (TC)n Simple_repeat Simple_repeat 2 37 0 4 1025 510 272 9 0 chrX 57701091 57701205 -108949091 + ORR1D1 LTR MaLR 198 312 -62 4 1025 1964 75 0 33 chrX 57701205 57701374 -108948922 - L1_Mur1 LINE L1 -2360 1552 1394 4 1025 948 137 102 11 chrX 57701374 57701551 -108948745 - B2_Mm1t SINE B2 0 193 1 4 1025 1964 100 8 28 chrX 57701551 57701742 -108948554 - L1_Mur1 LINE L1 -2519 1393 1196 4 1025 21 71 0 0 chrX 57701979 57702021 -108948275 + AT_rich Low_complexity Low_complexity 1 42 0 4 1025 251 167 0 0 chrX 57702053 57702095 -108948201 + B2_Mm2 SINE B2 1 42 -153 4 1025 331 244 100 46 chrX 57702346 57702508 -108947788 + RLTR13D3 LTR ERVK 981 1114 0 4 1025 706 247 84 155 chrX 57702508 57702805 -108947491 + MTE2a LTR MaLR 102 377 -2 4 1025 593 204 35 49 chrX 57702824 57702968 -108947328 - B1_Mur4 SINE Alu -4 146 5 4 1025 3067 143 26 9 chrX 57703191 57703720 -108946576 + RMER12 LTR ERVK 1 538 -784 4 1025 5363 167 26 34 chrX 57703724 57704675 -108945621 - RMER19B LTR ERVK -10 892 21 4 1025 1331 140 12 51 chrX 57704682 57704868 -108945428 + RMER12 LTR ERVK 535 715 -607 4 1025 1189 68 0 0 chrX 57704868 57705015 -108945281 + B1_Mm SINE Alu 1 147 0 4 1025 1331 140 12 51 chrX 57705015 57705084 -108945212 + RMER12 LTR ERVK 716 780 -542 4 1025 252 111 0 0 chrX 57705088 57705133 -108945163 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1025 609 246 45 96 chrX 57705133 57705353 -108944943 - ORR1E LTR MaLR -149 210 2 4 1025 387 0 0 0 chrX 57705694 57705737 -108944559 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 1025 751 178 5 197 chrX 57705799 57706002 -108944294 + MT2A LTR ERVL 3 166 -367 4 1025 2465 51 19 0 chrX 57706006 57706319 -108943977 + L1Md_A LINE L1 6261 6579 -3 4 1025 1876 216 63 2 chrX 57706684 57707079 -108943217 - MTD LTR MaLR 0 419 1 4 1025 6988 91 21 24 chrX 57707179 57708309 -108941987 - Lx LINE L1 -1 6653 5519 4 1025 272 272 19 28 chrX 57708329 57708435 -108941861 + RMER5 LTR ERV1 388 492 -42 4 1025 512 231 42 66 chrX 57708431 57708598 -108941698 + RCHARR1 DNA MER1_type 812 974 0 4 1025 583 314 149 10 chrX 57708598 57708642 -108941654 + MLT-int LTR MaLR 1399 1443 -292 4 1025 180 0 0 0 chrX 57708642 57708662 -108941634 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 1025 583 314 149 10 chrX 57708662 57708911 -108941385 + MLT-int LTR MaLR 1444 1733 -2 4 1025 713 200 44 15 chrX 57708911 57709033 -108941263 - B3A SINE B2 -70 128 3 4 1025 1459 196 168 43 chrX 57709181 57709379 -108940917 - MTD LTR MaLR -2 417 193 4 1025 2952 68 2 20 chrX 57709379 57709782 -108940514 + MTA_Mm LTR MaLR 1 396 0 4 1025 7483 87 4 69 chrX 57709782 57710956 -108939340 + MTA_Mm-int LTR MaLR 1 1098 0 4 1025 3179 51 0 15 chrX 57710956 57711358 -108938938 + MTA_Mm LTR MaLR 1 396 0 4 1025 1459 196 168 43 chrX 57711358 57711509 -108938787 - MTD LTR MaLR -227 192 24 4 1025 405 0 0 0 chrX 57711510 57711555 -108938741 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1025 24 32 0 0 chrX 57711617 57711648 -108938648 + AT_rich Low_complexity Low_complexity 1 31 0 4 1025 830 269 105 43 chrX 57712345 57712765 -108937531 - Charlie4a DNA MER1_type -1 507 62 4 1025 800 303 42 9 chrX 57712770 57712983 -108937313 + B4 SINE B4 8 227 -65 4 1025 291 140 0 0 chrX 57713079 57713129 -108937167 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1025 716 200 37 0 chrX 57713153 57713288 -108937008 - B1_Mus1 SINE Alu -7 141 2 4 1025 194 324 108 27 chrX 57713364 57713475 -108936821 - L2 LINE L2 -1114 2305 2186 4 1025 1267 233 67 47 chrX 57713504 57713865 -108936431 - ORR1D2 LTR MaLR -2 368 1 4 1025 502 194 120 21 chrX 57714028 57714170 -108936126 - MTD LTR MaLR -2 417 262 4 1025 1151 242 49 115 chrX 57714160 57714613 -108935683 + RLTR23 LTR ERV1 8 430 0 4 1025 430 278 0 0 chrX 57714613 57714717 -108935579 - MTD LTR MaLR -154 267 164 4 1025 403 288 6 33 chrX 57714744 57714952 -108935344 + L1M2 LINE L1 5599 5800 -364 4 1025 1342 173 26 41 chrX 57715936 57716207 -108934089 + RMER6C LTR ERVK 424 690 0 4 1025 758 178 16 0 chrX 57716207 57716333 -108933963 - B1F1 SINE Alu -18 131 4 4 1025 447 279 8 8 chrX 57716399 57716529 -108933767 - MER96B DNA hAT -5 412 283 4 1025 180 0 0 0 chrX 57716544 57716564 -108933732 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 1025 297 0 0 0 chrX 57716567 57716600 -108933696 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1025 717 215 22 0 chrX 57716608 57716743 -108933553 - B3A SINE B2 -60 138 1 4 1025 217 169 122 122 chrX 57717238 57717312 -108932984 - B1_Mur1 SINE Alu 0 149 76 4 1025 628 215 25 0 chrX 57717317 57717438 -108932858 - B1F SINE Alu -6 143 20 4 1025 23 0 0 0 chrX 57717559 57717582 -108932714 + AT_rich Low_complexity Low_complexity 1 23 0 4 1025 628 232 148 0 chrX 57717820 57717975 -108932321 - B3A SINE B2 -17 181 4 4 1025 837 336 51 5 chrX 57718096 57718488 -108931808 + L1MB3 LINE L1 5682 6091 -92 4 1025 266 389 28 0 chrX 57718488 57718668 -108931628 + MIRb SINE MIR 78 262 -6 4 1025 262 283 0 0 chrX 57718668 57718721 -108931575 + ID4 SINE ID 1 53 -30 4 1025 206 62 31 0 chrX 57719768 57719800 -108930496 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 4 1025 1045 229 12 16 chrX 57719800 57720044 -108930252 - Lx6 LINE L1 -31 7429 7187 4 1025 180 97 0 0 chrX 57720578 57720609 -108929687 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1025 348 163 0 0 chrX 57720768 57720854 -108929442 + CT-rich Low_complexity Low_complexity 1 86 0 4 1025 278 247 66 102 chrX 57721141 57721264 -108929032 + MT2B LTR ERVL 125 238 -346 4 1025 615 162 135 0 chrX 57721200 57721311 -108928985 + B1_Mur2 SINE Alu 9 134 -15 4 1025 453 255 158 50 chrX 57721421 57721623 -108928673 + ID_B1 SINE B4 1 224 0 4 1025 216 0 0 0 chrX 57721624 57721648 -108928648 + (CAA)n Simple_repeat Simple_repeat 1 24 0 4 1025 3722 137 20 36 chrX 57722087 57722724 -108927572 - Lx2 LINE L1 0 6997 6371 4 1025 216 222 0 47 chrX 57722755 57722840 -108927456 + CT-rich Low_complexity Low_complexity 3 83 0 4 1025 333 298 69 39 chrX 57722853 57722983 -108927313 - PB1D10 SINE Alu -20 129 1 4 1025 349 374 15 60 chrX 57723534 57723733 -108926563 + MLT1F LTR MaLR 1 190 -358 4 1025 598 190 48 48 chrX 57723784 57723950 -108926346 + MER2 DNA MER2_type 86 251 -94 4 1025 833 188 204 0 chrX 57724009 57724185 -108926111 + B3 SINE B2 1 212 -4 4 1025 563 244 22 0 chrX 57724313 57724427 -108925869 + PB1D10 SINE Alu 2 127 0 4 1025 1832 161 62 52 chrX 57724550 57724936 -108925360 + ORR1B1 LTR MaLR 5 394 0 4 1025 306 0 0 0 chrX 57724955 57724989 -108925307 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1025 2004 142 56 20 chrX 57724989 57725347 -108924949 + MTB_Mm LTR MaLR 24 394 -13 4 1025 239 125 42 0 chrX 57725349 57725397 -108924899 + GA-rich Low_complexity Low_complexity 4 53 0 4 1025 1416 186 177 17 chrX 57725431 57725787 -108924509 + MTC LTR MaLR 1 413 -8 4 1025 600 159 150 8 chrX 57725852 57725979 -108924317 + B1_Mur3 SINE Alu 3 147 -2 4 1025 376 186 26 17 chrX 57726004 57726119 -108924177 + GA-rich Low_complexity Low_complexity 1 116 0 4 1025 198 409 52 26 chrX 57726585 57726738 -108923558 + MIRb SINE MIR 35 191 -77 4 1025 401 345 55 10 chrX 57727046 57727245 -108923051 + RMER15 LTR ERVL 353 560 -15 4 1025 394 360 47 47 chrX 57727845 57728099 -108922197 + L1MEc LINE L1 36 289 -6111 4 1025 3646 58 2 0 chrX 57728102 57728564 -108921732 - L1Md_F2 LINE L1 0 6582 6120 4 1025 1467 44 28 0 chrX 57728808 57728990 -108921306 - B2_Mm2 SINE B2 -8 187 1 4 1025 1239 167 74 16 chrX 57729048 57729291 -108921005 - ORR1C1 LTR MaLR -47 331 75 4 1025 1213 95 0 6 chrX 57729491 57729660 -108920636 - B2_Mm2 SINE B2 -26 169 2 4 1025 2485 71 3 12 chrX 57730107 57730437 -108919859 + ORR1A2 LTR MaLR 1 327 0 4 1025 499 250 14 7 chrX 57730460 57730601 -108919695 - Lx8 LINE L1 -931 6542 6401 4 1025 376 193 25 16 chrX 57730628 57730749 -108919547 + (TA)n Simple_repeat Simple_repeat 2 123 0 4 1025 533 202 9 0 chrX 57730772 57730886 -108919410 - L1M4 LINE L1 -743 5437 5323 4 1025 679 232 7 7 chrX 57730886 57731029 -108919267 - B1_Mur2 SINE Alu -2 147 5 4 1025 481 255 50 40 chrX 57731029 57731148 -108919148 - L1M4 LINE L1 -824 5322 5202 4 1025 505 292 54 34 chrX 57731174 57731323 -108918973 - RSINE1 SINE B4 -2 163 12 4 1025 486 253 96 0 chrX 57731344 57731510 -108918786 - L1M4 LINE L1 -955 5191 5010 4 1025 211 243 0 0 chrX 57731594 57731631 -108918665 - B1F1 SINE Alu -100 49 13 4 1025 497 284 35 14 chrX 57731689 57731832 -108918464 - B1_Mur1 SINE Alu -2 147 2 4 1025 339 333 22 15 chrX 57731926 57732063 -108918233 - RMER15 LTR ERVL -16 559 422 4 1025 3100 291 93 72 chrX 57732182 57733920 -108916376 - ORR1E-int LTR MaLR -20 1560 1 4 1025 266 0 73 59 chrX 57733923 57733991 -108916305 + (CAAAA)n Simple_repeat Simple_repeat 2 70 0 4 1025 283 236 18 0 chrX 57733993 57734048 -108916248 - ORR1E-int LTR MaLR -1314 56 1 4 1025 1048 235 126 44 chrX 57734048 57734390 -108915906 - ORR1E LTR MaLR 0 370 1 4 1025 739 174 6 75 chrX 57734393 57734445 -108915851 - B2_Mm1a SINE B2 -30 163 121 4 1025 335 23 23 0 chrX 57734445 57734489 -108915807 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 5 1025 1150 44 0 0 chrX 57734489 57734624 -108915672 - B1_Mm SINE Alu -11 136 2 5 1025 739 174 6 75 chrX 57734624 57734731 -108915565 - B2_Mm1a SINE B2 -73 120 15 4 1025 228 257 95 0 chrX 57734900 57734974 -108915322 + PB1D10 SINE Alu 3 83 -34 5 1025 633 144 14 7 chrX 57736592 57736739 -108913557 + (CACG)n Simple_repeat Simple_repeat 2 149 0 5 1025 320 316 53 0 chrX 57736741 57736855 -108913441 + L1MC4 LINE L1 424 543 -5672 5 1025 354 147 29 0 chrX 57736855 57736923 -108913373 + RMER4A LTR ERVK 1 70 -396 5 1025 1241 41 0 0 chrX 57736925 57737072 -108913224 - B1_Mus2 SINE Alu 0 147 1 5 1025 612 206 0 0 chrX 57737072 57737203 -108913093 + T-rich Low_complexity Low_complexity 1 131 0 5 1025 2227 153 38 2 chrX 57737205 57737599 -108912697 + RMER4A LTR ERVK 59 466 0 5 1025 236 302 32 65 chrX 57737645 57737769 -108912527 + BC1_Mm scRNA scRNA 2 121 -31 5 1025 420 262 48 41 chrX 57737775 57737905 -108912391 + L1MD LINE L1 3124 3255 -2891 5 1025 3425 5 0 0 chrX 57737905 57738286 -108912010 + L1Md_A LINE L1 6202 6582 0 5 1025 420 262 48 41 chrX 57738286 57738302 -108911994 + L1MD LINE L1 3256 3271 -2875 5 1025 365 158 90 50 chrX 57738313 57738413 -108911883 + L1MC4 LINE L1 654 757 -5458 5 1025 242 246 0 0 chrX 57738420 57738485 -108911811 + L1MC4 LINE L1 3058 3122 -3092 5 1025 3662 198 41 68 chrX 57738500 57739490 -108910806 + Lx7 LINE L1 6729 7692 -4 5 1025 22 56 0 0 chrX 57739490 57739526 -108910770 + AT_rich Low_complexity Low_complexity 1 36 0 5 1025 225 211 39 0 chrX 57739968 57740020 -108910276 + MER67C LTR ERV1 145 198 -513 5 1025 2405 97 19 121 chrX 57741052 57741522 -108908774 + BGLII_Mus LTR ERVK 1 422 0 5 1025 627 289 61 12 chrX 57741629 57741874 -108908422 + Lx8 LINE L1 6332 6588 -885 5 1025 1191 68 0 0 chrX 57742011 57742158 -108908138 - B1_Mus1 SINE Alu 0 148 2 5 1025 187 232 194 101 chrX 57743130 57743269 -108907027 - L2c LINE L2 -3 3384 3233 5 1025 250 180 0 0 chrX 57743317 57743367 -108906929 - L1ME4a LINE L1 -15 6109 6060 5 1025 403 321 50 0 chrX 57743374 57743514 -108906782 + MIR SINE MIR 20 166 -96 5 1025 258 32 0 0 chrX 57744591 57744622 -108905674 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1025 345 47 0 0 chrX 57744622 57744664 -108905632 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 1025 948 109 29 14 chrX 57744690 57744829 -108905467 - B1_Mus1 SINE Alu -7 141 1 5 1025 234 0 0 0 chrX 57745158 57745184 -108905112 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 1025 661 273 19 13 chrX 57745192 57745348 -108904948 - B3A SINE B2 -41 157 1 5 1025 487 223 0 19 chrX 57745354 57745459 -108904837 - ID_B1 SINE B4 -4 220 118 5 1025 379 238 56 41 chrX 57745357 57745498 -108904798 - B1F SINE Alu -7 142 1 5 1025 1543 37 5 5 chrX 57745558 57745747 -108904549 + B2_Mm2 SINE B2 2 190 -5 5 1025 1366 72 39 0 chrX 57745945 57746125 -108904171 - B2_Mm2 SINE B2 -8 187 1 5 1025 237 316 37 75 chrX 57746473 57746661 -108903635 + MIRb SINE MIR 56 236 -32 5 1025 515 315 29 35 chrX 57746674 57746720 -108903576 + B4 SINE B4 48 175 -117 5 1025 667 214 0 0 chrX 57746720 57746832 -108903464 + B1_Mur1 SINE Alu 3 114 -35 5 1025 515 315 29 35 chrX 57746832 57746845 -108903451 + B4 SINE B4 176 217 -75 5 1025 979 244 9 5 chrX 57746866 57747080 -108903216 + B3 SINE B2 2 216 0 5 1025 299 314 9 38 chrX 57747586 57747692 -108902604 + BC1_Mm scRNA scRNA 2 104 -48 5 1025 494 282 102 8 chrX 57747799 57748150 -108902146 + L1M5 LINE L1 5260 5642 -552 5 1025 272 49 0 47 chrX 57748339 57748382 -108901914 + (CATA)n Simple_repeat Simple_repeat 2 42 0 5 1025 21 0 0 0 chrX 57748528 57748549 -108901747 + AT_rich Low_complexity Low_complexity 1 21 0 5 1025 1002 79 50 0 chrX 57749397 57749536 -108900760 - B1_Mus2 SINE Alu -1 146 1 5 1025 832 106 0 7 chrX 57749564 57749707 -108900589 - L1_Mus4 LINE L1 -9 6627 6486 5 1025 255 356 34 17 chrX 57749789 57749906 -108900390 - Cheshire DNA MER1_type -2297 123 5 5 1025 213 39 0 0 chrX 57750836 57750862 -108899434 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 5 1025 376 317 0 0 chrX 57752451 57752555 -108897741 + PB1D10 SINE Alu 1 104 -13 5 1025 268 339 0 0 chrX 57752557 57752622 -108897674 + ID4_ SINE ID 8 72 -11 5 1025 433 150 18 9 chrX 57752667 57752781 -108897515 + (CAGA)n Simple_repeat Simple_repeat 2 116 0 5 1025 6529 88 3 9 chrX 57752827 57753775 -108896521 + Lx2 LINE L1 5705 6646 -351 5 1025 1137 156 23 0 chrX 57753772 57753990 -108896306 + Lx2 LINE L1 6775 6997 0 5 1025 276 265 0 108 chrX 57754804 57754897 -108895399 + MTEa LTR MaLR 1 83 -296 5 1025 585 281 76 53 chrX 57755069 57755299 -108894997 + Lx8 LINE L1 7004 7244 -229 5 1025 635 433 101 40 chrX 57755299 57755694 -108894602 - MTD LTR MaLR 0 419 1 5 1025 585 281 76 53 chrX 57755694 57755726 -108894570 + Lx8 LINE L1 7245 7272 -201 5 1025 180 179 0 0 chrX 57755762 57755801 -108894495 + GA-rich Low_complexity Low_complexity 6 44 0 5 1025 2176 86 9 65 chrX 57755915 57756253 -108894043 - ORR1A2 LTR MaLR -8 319 1 5 1025 627 81 0 0 chrX 57756253 57756339 -108893957 + (TG)n Simple_repeat Simple_repeat 2 87 0 5 1025 1542 221 102 19 chrX 57756488 57756862 -108893434 - MTD LTR MaLR -1 418 14 5 1025 1355 235 45 42 chrX 57759754 57760064 -108890232 - MTEa LTR MaLR 0 379 84 5 1025 450 0 0 0 chrX 57760064 57760114 -108890182 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1025 1355 235 45 42 chrX 57760114 57760181 -108890115 - MTEa LTR MaLR -296 83 3 5 1025 800 263 59 134 chrX 57760738 57761147 -108889149 + MTE2a LTR MaLR 2 379 0 5 1025 332 102 0 0 chrX 57761979 57762028 -108888268 - U2 snRNA snRNA -1 187 139 5 1025 1707 278 60 20 chrX 57762434 57763486 -108886810 - Lx6 LINE L1 -26 7434 6025 5 1025 1367 158 9 13 chrX 57770332 57770563 -108879733 - ORR1A4 LTR MaLR 0 329 100 5 1025 387 310 151 24 chrX 57770699 57770714 -108879582 - B4A SINE B4 -7 285 270 5 1025 306 125 0 0 chrX 57770714 57770762 -108879534 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1025 387 310 151 24 chrX 57770762 57770997 -108879299 - B4A SINE B4 -23 269 3 5 1025 768 260 5 30 chrX 57771404 57771602 -108878694 - B3A SINE B2 -3 195 3 5 1025 293 118 0 19 chrX 57771606 57771658 -108878638 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 5 1025 240 307 77 26 chrX 57772187 57772304 -108877992 + MIRc SINE MIR 14 136 -140 5 1025 5948 31 0 3 chrX 57772307 57773012 -108877284 - L1Md_F3 LINE L1 -1 6583 5881 5 1025 183 220 0 91 chrX 57773330 57773385 -108876911 - L2 LINE L2 -1846 1573 1524 5 1025 200 200 18 0 chrX 57773403 57773458 -108876838 + GA-rich Low_complexity Low_complexity 1 56 0 5 1025 514 299 65 18 chrX 57773495 57773665 -108876631 - MTEa LTR MaLR -196 183 6 5 1025 311 330 180 44 chrX 57773697 57774064 -108876232 + MER57C2 LTR ERV1 18 434 0 5 1025 626 282 88 20 chrX 57774087 57774554 -108875742 + L1MD LINE L1 5105 5602 -757 5 1025 467 282 0 0 chrX 57774555 57774665 -108875631 + ID_B1 SINE B4 114 223 -1 5 1025 333 300 64 7 chrX 57774697 57774838 -108875458 + L1MD LINE L1 5602 5750 -609 5 1025 218 368 48 21 chrX 57775195 57775384 -108874912 - MIRb SINE MIR -8 260 67 5 1025 335 190 42 183 chrX 57775929 57776071 -108874225 - MTEa LTR MaLR -56 323 202 5 1025 228 234 16 0 chrX 57776071 57776135 -108874161 + GA-rich Low_complexity Low_complexity 1 65 0 5 1025 701 215 167 29 chrX 57776142 57776280 -108874016 - MTE-int LTR MaLR -52 1528 1365 5 1025 180 0 0 0 chrX 57776280 57776300 -108873996 + (CTA)n Simple_repeat Simple_repeat 1 20 0 5 1025 701 215 167 29 chrX 57776300 57776401 -108873895 - MTE-int LTR MaLR -216 1364 1257 5 1025 440 280 111 22 chrX 57776781 57776916 -108873380 - B1F SINE Alu 0 149 3 5 1025 1198 112 39 0 chrX 57777792 57777970 -108872326 + B2_Mm2 SINE B2 1 185 -10 5 1025 231 222 0 31 chrX 57778630 57778695 -108871601 - L1M5 LINE L1 -725 5448 5386 5 1025 533 140 89 45 chrX 57778697 57778876 -108871420 - RMER17C LTR ERVK -133 277 91 5 1025 308 358 110 9 chrX 57778919 57779238 -108871058 - Lx8 LINE L1 -34 7439 7089 5 1025 237 33 0 0 chrX 57779511 57779541 -108870755 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 1025 607 306 55 6 chrX 57779621 57779802 -108870494 - ID_B1 SINE B4 -34 190 1 5 1025 318 26 0 0 chrX 57779890 57779929 -108870367 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1025 879 177 151 0 chrX 57780133 57780319 -108869977 - B3 SINE B2 -2 214 1 5 1025 7056 147 35 58 chrX 57780426 57781605 -108868691 - Lx2B LINE L1 0 7000 5812 5 1025 278 105 0 0 chrX 57781605 57781643 -108868653 - tRNA-Ser-AGY tRNA tRNA -47 38 1 5 1025 7056 147 35 58 chrX 57781643 57782170 -108868126 - Lx2B LINE L1 0 5811 5279 5 1025 474 18 0 0 chrX 57782285 57782340 -108867956 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 1025 301 243 82 139 chrX 57782750 57782867 -108867429 + B4A SINE B4 111 214 -78 5 1025 285 29 0 0 chrX 57782867 57782901 -108867395 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 5 1025 718 159 0 73 chrX 57782901 57782917 -108867379 + B1_Mur1 SINE Alu 137 149 0 5 1025 301 243 82 139 chrX 57782917 57782941 -108867355 + B4A SINE B4 215 259 -33 5 1025 233 180 16 16 chrX 57782941 57783003 -108867293 + A-rich Low_complexity Low_complexity 4 65 0 5 1025 1201 155 182 7 chrX 57783060 57783241 -108867055 + RMER1B Other Other 730 917 -149 5 1025 360 0 0 0 chrX 57783241 57783281 -108867015 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 5 1025 1201 155 182 7 chrX 57783281 57783385 -108866911 + RMER1B Other Other 918 1064 -2 5 1025 1066 361 40 45 chrX 57783399 57783927 -108866369 - MTEa-int LTR MaLR -320 1260 736 5 1025 1202 327 63 49 chrX 57784167 57784742 -108865554 - MTEa-int LTR MaLR -997 583 1 5 1025 459 289 111 19 chrX 57784742 57784904 -108865392 - MTEa LTR MaLR 0 379 203 5 1025 643 359 88 41 chrX 57784934 57785321 -108864975 - MTE-int LTR MaLR -158 1422 1018 5 1025 415 290 53 0 chrX 57785325 57785456 -108864840 + MTE-int LTR MaLR 1416 1553 -27 5 1025 342 0 0 0 chrX 57785469 57785507 -108864789 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1025 4814 173 44 14 chrX 57785563 57786594 -108863702 - L1_Mur3 LINE L1 -731 5149 4088 5 1025 1915 163 28 54 chrX 57786596 57786984 -108863312 + ORR1C1 LTR MaLR 1 378 0 5 1025 1406 201 119 6 chrX 57786984 57787295 -108863001 + ORR1C1-int LTR MaLR 1 346 -1163 5 1025 1024 122 135 10 chrX 57787297 57787504 -108862792 - Lx2 LINE L1 0 6997 6765 5 1025 626 65 42 21 chrX 57787495 57787590 -108862706 - Lx2 LINE L1 -354 6643 6547 5 1025 1373 194 50 53 chrX 57787590 57787659 -108862637 + ORR1C1-int LTR MaLR 290 357 -1152 5 1025 2722 71 5 19 chrX 57787659 57788033 -108862263 + L1_Mus3 LINE L1 6265 6633 -5 6 1025 3590 221 77 38 chrX 57788033 57788998 -108861298 + ORR1C1-int LTR MaLR 352 1370 0 5 1025 1983 177 27 13 chrX 57788998 57789371 -108860925 + ORR1C1 LTR MaLR 1 378 0 5 1025 266 186 17 0 chrX 57789371 57789430 -108860866 - L1_Mur3 LINE L1 -1790 4090 4031 5 1025 8299 199 52 64 chrX 57789432 57791990 -108858306 - L1_Mur3 LINE L1 -2110 3770 1243 5 1025 180 111 0 0 chrX 57792123 57792150 -108858146 + (TGG)n Simple_repeat Simple_repeat 3 29 0 6 1025 255 231 0 71 chrX 57792549 57792647 -108857649 + L1MD1 LINE L1 6152 6242 0 6 1025 904 298 119 30 chrX 57792802 57793297 -108856999 - Lx8 LINE L1 0 7473 6935 6 1025 338 286 12 16 chrX 57793394 57793593 -108856703 - L1M3 LINE L1 -1006 4874 4672 6 1025 547 294 59 4 chrX 57793570 57793806 -108856490 + L1_Mur3 LINE L1 5017 5265 -878 6 1025 230 333 0 0 chrX 57793858 57793936 -108856360 - PB1D10 SINE Alu 0 117 40 6 1025 599 267 96 38 chrX 57793970 57794368 -108855928 + L1_Mur3 LINE L1 5345 5757 -123 6 1025 1139 286 97 17 chrX 57794379 57794913 -108855383 + L1MA5A LINE L1 5320 5896 -401 6 1025 270 148 0 0 chrX 57795160 57795214 -108855082 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 1025 196 132 56 19 chrX 57799150 57799204 -108851092 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 6 1025 411 92 0 0 chrX 57799371 57799436 -108850860 + (TCC)n Simple_repeat Simple_repeat 1 65 0 6 1025 21 71 0 0 chrX 57800771 57800813 -108849483 + GC_rich Low_complexity Low_complexity 1 42 0 6 1025 189 0 0 0 chrX 57800820 57800841 -108849455 + (CGGGG)n Simple_repeat Simple_repeat 2 22 0 6 1025 228 67 0 0 chrX 57800858 57800888 -108849408 + (CTCG)n Simple_repeat Simple_repeat 1 30 0 6 1025 21 0 0 0 chrX 57800907 57800928 -108849368 + GC_rich Low_complexity Low_complexity 1 21 0 6 1025 287 336 15 7 chrX 57800929 57801064 -108849232 + G-rich Low_complexity Low_complexity 3 138 0 6 1025 207 0 0 0 chrX 57801119 57801142 -108849154 + (GGA)n Simple_repeat Simple_repeat 3 25 0 6 1025 372 43 0 0 chrX 57801143 57801189 -108849107 + (CGG)n Simple_repeat Simple_repeat 2 47 0 6 1025 369 224 119 30 chrX 57802292 57802393 -108847903 + L2b LINE L2 3266 3375 0 6 1026 213 398 78 50 chrX 57803784 57803964 -108846332 - L2b LINE L2 -94 3281 3097 6 1026 189 329 25 12 chrX 57804571 57804651 -108845645 + L2a LINE L2 3322 3402 -24 6 1026 202 206 0 0 chrX 57804830 57804864 -108845432 + G-rich Low_complexity Low_complexity 2 35 0 6 1026 582 118 0 0 chrX 57804864 57804957 -108845339 + (GGAA)n Simple_repeat Simple_repeat 2 94 0 6 1026 3183 126 95 18 chrX 57805130 57805688 -108844608 - Lx LINE L1 0 6654 6054 6 1026 708 178 49 56 chrX 57805838 57805981 -108844315 + B1_Mur1 SINE Alu 7 148 -1 6 1026 396 0 0 0 chrX 57806682 57806726 -108843570 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 1026 232 182 73 0 chrX 57807175 57807230 -108843066 + MIR3 SINE MIR 148 206 -2 6 1026 492 230 0 20 chrX 57807536 57807638 -108842658 - Charlie12 DNA MER1_type -2771 102 3 6 1026 273 222 0 18 chrX 57808101 57808156 -108842140 - ID4_ SINE ID -1 82 29 6 1026 237 262 11 56 chrX 57808156 57808188 -108842108 - ID SINE ID -139 83 1 6 1026 663 300 91 8 chrX 57809393 57809958 -108840338 - L1MA4 LINE L1 -1662 5982 5387 6 1026 597 249 76 81 chrX 57809970 57810167 -108840129 - B3A SINE B2 -2 196 1 6 1026 322 279 104 46 chrX 57810167 57810562 -108839734 - L1MA4 LINE L1 -743 5400 4983 6 1026 627 264 15 9 chrX 57810796 57810953 -108839343 - B4A SINE B4 -63 229 79 6 1026 603 307 7 0 chrX 57811170 57811320 -108838976 + RSINE1 SINE B4 8 158 -7 6 1026 288 0 0 0 chrX 57811553 57811585 -108838711 + (TCCC)n Simple_repeat Simple_repeat 2 33 0 6 1026 296 262 12 12 chrX 57811606 57811687 -108838609 - ID4 SINE ID 0 83 3 6 1026 327 333 206 0 chrX 57811868 57811947 -108838349 - Tigger7 DNA MER2_type -2224 267 186 6 1026 5051 35 3 7 chrX 57811947 57812558 -108837738 - L1Md_F3 LINE L1 0 6584 5976 6 1026 327 333 206 0 chrX 57812558 57812677 -108837619 - Tigger7 DNA MER2_type -2306 185 29 6 1026 938 195 0 11 chrX 57812677 57812853 -108837443 + B2_Mm2 SINE B2 1 174 -21 6 1026 22 35 0 0 chrX 57812879 57812908 -108837388 + AT_rich Low_complexity Low_complexity 1 29 0 6 1026 1347 298 114 109 chrX 57813136 57814275 -108836021 + Lx5 LINE L1 5873 7017 -33 6 1026 888 154 11 6 chrX 57814280 57814456 -108835840 + GA-rich Low_complexity Low_complexity 1 177 0 6 1026 934 273 4 47 chrX 57814625 57814902 -108835394 + RMER1C Other Other 28 292 -1050 6 1026 2457 137 50 0 chrX 57815138 57815554 -108834742 + Lx2 LINE L1 6560 6996 -1 6 1026 363 209 0 15 chrX 57816093 57816161 -108834135 - B1_Mur3 SINE Alu -81 68 2 6 1026 201 286 85 61 chrX 57816539 57816621 -108833675 + MIR3 SINE MIR 112 195 -13 6 1026 621 286 41 26 chrX 57816688 57816882 -108833414 - B3 SINE B2 -19 197 1 6 1026 1177 214 5 0 chrX 57817455 57817670 -108832626 - B3 SINE B2 0 216 1 6 1026 352 296 62 57 chrX 57818058 57818172 -108832124 - MIR SINE MIR -43 219 111 6 1026 972 244 44 126 chrX 57818172 57818585 -108831711 + MTEa LTR MaLR 1 379 0 6 1026 352 296 62 57 chrX 57818585 57818681 -108831615 - MIR SINE MIR -152 110 8 6 1026 763 198 11 6 chrX 57819015 57819193 -108831103 + (CATA)n Simple_repeat Simple_repeat 2 180 0 6 1026 312 304 52 67 chrX 57819303 57819437 -108830859 + MT2B LTR ERVL 147 278 -323 6 1026 844 118 39 16 chrX 57819329 57819453 -108830843 + B1_Mus1 SINE Alu 9 136 -12 6 1026 348 24 0 0 chrX 57819453 57819494 -108830802 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 6 1026 206 275 75 0 chrX 57819498 57819578 -108830718 - MIR SINE MIR -52 210 125 6 1026 233 380 17 77 chrX 57820506 57820623 -108829673 + LTR78 LTR ERV1 850 959 -345 6 1026 477 0 0 0 chrX 57821262 57821315 -108828981 + (TC)n Simple_repeat Simple_repeat 1 53 0 6 1026 296 347 38 91 chrX 57821406 57821615 -108828681 - MIR3 SINE MIR -8 200 3 6 1026 498 33 0 0 chrX 57822980 57823040 -108827256 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 1026 357 24 0 0 chrX 57823040 57823081 -108827215 + (GA)n Simple_repeat Simple_repeat 2 43 0 6 1026 22 0 0 0 chrX 57823455 57823477 -108826819 + AT_rich Low_complexity Low_complexity 1 22 0 6 1026 22 80 0 0 chrX 57823494 57823544 -108826752 + AT_rich Low_complexity Low_complexity 1 50 0 6 1026 182 322 0 0 chrX 57824449 57824508 -108825788 - MIRc SINE MIR -195 73 15 6 1026 22 35 0 0 chrX 57824661 57824690 -108825606 + AT_rich Low_complexity Low_complexity 1 29 0 6 1026 1460 101 15 55 chrX 57824968 57825241 -108825055 + Lx LINE L1 6393 6654 0 6 1026 21 0 0 0 chrX 57825489 57825510 -108824786 + AT_rich Low_complexity Low_complexity 1 21 0 6 1026 280 305 174 41 chrX 57826163 57826358 -108823938 + MER57C2 LTR ERV1 6 226 -208 6 1026 330 270 56 11 chrX 57826582 57826672 -108823624 - MIRc SINE MIR -119 149 56 6 1026 493 312 16 8 chrX 57826786 57826915 -108823381 + ID_B1 SINE B4 4 133 -91 6 1026 1016 234 165 58 chrX 57826919 57827282 -108823014 + MTD LTR MaLR 4 405 -14 6 1026 27 29 0 0 chrX 57827325 57827359 -108822937 + AT_rich Low_complexity Low_complexity 1 34 0 6 1026 522 282 0 8 chrX 57827608 57827726 -108822570 - PB1D10 SINE Alu 0 117 1 6 1026 2329 98 6 12 chrX 57827928 57828257 -108822039 - ORR1A2 LTR MaLR 0 327 1 6 1026 5495 109 42 4 chrX 57828333 57829244 -108821052 - L1_Mur2 LINE L1 -1472 4405 3461 6 1026 263 208 0 0 chrX 57829260 57829308 -108820988 - PB1D9 SINE Alu -5 115 68 6 1026 184 301 116 21 chrX 57829372 57829467 -108820829 - L3 LINE CR1 -42 4447 4344 6 1026 10205 164 12 66 chrX 57832172 57833548 -108816748 - L1_Mur2 LINE L1 -2400 3477 2117 6 1026 984 101 65 0 chrX 57833548 57833687 -108816609 - B1_Mus1 SINE Alu 0 148 1 6 1026 10205 158 25 53 chrX 57833687 57834873 -108815423 - L1_Mur2 LINE L1 -3761 2116 1027 6 1026 3000 54 5 3 chrX 57834878 57835267 -108815029 - MTB LTR MaLR -10 390 1 6 1026 24 85 0 0 chrX 57835588 57835647 -108814649 + AT_rich Low_complexity Low_complexity 1 59 0 6 1026 34 42 0 0 chrX 57835746 57835794 -108814502 + AT_rich Low_complexity Low_complexity 1 48 0 6 1026 242 143 20 0 chrX 57836124 57836173 -108814123 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 1026 27 0 0 0 chrX 57836420 57836447 -108813849 + AT_rich Low_complexity Low_complexity 1 27 0 6 1026 894 257 48 21 chrX 57836508 57836838 -108813458 - L1M4 LINE L1 -450 5728 5390 6 1026 368 285 27 93 chrX 57836838 57836982 -108813314 - B1F2 SINE Alu 0 148 7 6 1026 1313 251 74 111 chrX 57836984 57837899 -108812397 - L1M4 LINE L1 -745 5401 4532 6 1026 468 256 112 8 chrX 57837899 57838033 -108812263 + B1_Mur3 SINE Alu 2 149 0 6 1026 1313 251 74 111 chrX 57838033 57838237 -108812059 - L1M4 LINE L1 -1615 4531 4324 6 1026 217 338 26 0 chrX 57838243 57838320 -108811976 - ID4_ SINE ID -4 79 1 6 1026 23602 61 4 0 chrX 57838343 57842264 -108808032 - L1Md_F2 LINE L1 -1 6581 2644 6 1026 2539 74 47 1 chrX 57842248 57842926 -108807370 - L1Md_F2 LINE L1 -4230 1653 942 6 1026 6834 50 0 1 chrX 57842926 57843771 -108806525 - L1Md_F3 LINE L1 0 6584 5741 6 1026 1214 80 0 0 chrX 57843772 57843947 -108806349 + L1_Mm LINE L1 4073 4247 -1636 6 1026 1729 158 8 11 chrX 57843940 57844291 -108806005 - L1Md_F2 LINE L1 -5744 980 631 6 1026 254 314 44 26 chrX 57844292 57844521 -108805775 - L1M4 LINE L1 -1834 4312 4080 6 1026 2708 118 10 7 chrX 57844572 57844975 -108805321 - Lx3C LINE L1 -2 6974 6571 6 1026 2744 36 0 0 chrX 57845052 57845389 -108804907 + L1Md_F2 LINE L1 5605 5941 -641 6 1026 757 129 0 0 chrX 57845388 57845527 -108804769 + L1Md_Gf LINE L1 128 266 -6256 6 1026 416 95 0 0 chrX 57845528 57845591 -108804705 + L1_Mus2 LINE L1 5949 6011 -555 6 1026 247 315 62 36 chrX 57845776 57845888 -108804408 + LTR16B LTR ERVL 18 132 -331 6 1026 537 16 0 0 chrX 57846057 57846119 -108804177 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 6 1026 1327 253 87 24 chrX 57846544 57847006 -108803290 + RMER5 LTR ERV1 44 534 0 6 1026 235 281 0 0 chrX 57847006 57847063 -108803233 + MIR SINE MIR 100 156 -106 6 1026 241 282 13 0 chrX 57847067 57847145 -108803151 + MADE2 DNA Mariner 1 79 -1 6 1026 869 293 76 67 chrX 57847251 57847924 -108802372 - L1MB7 LINE L1 -42 6142 5464 6 1026 259 311 7 0 chrX 57848074 57848140 -108802156 - ID4 SINE ID -11 72 3 7 1026 2264 115 0 3 chrX 57848276 57848607 -108801689 - Lx LINE L1 -2 6652 6323 7 1026 217 302 19 0 chrX 57848758 57848811 -108801485 - ID4 SINE ID -23 60 7 7 1026 2464 121 13 8 chrX 57848811 57849202 -108801094 - Lx LINE L1 -342 6312 5920 7 1026 383 266 108 19 chrX 57849213 57849370 -108800926 - L1MB7 LINE L1 -720 5458 5288 6 1026 42 20 0 0 chrX 57849419 57849468 -108800828 + AT_rich Low_complexity Low_complexity 1 49 0 7 1026 774 196 21 0 chrX 57849537 57849680 -108800616 - B1_Mur4 SINE Alu 0 150 5 7 1026 22 56 0 0 chrX 57849752 57849788 -108800508 + AT_rich Low_complexity Low_complexity 1 36 0 7 1026 311 316 10 10 chrX 57849795 57849891 -108800405 - ID_B1 SINE B4 0 224 129 7 1026 255 253 63 0 chrX 57850024 57850103 -108800193 - Lx7 LINE L1 0 7696 7613 7 1026 907 243 6 152 chrX 57850161 57850491 -108799805 - Lx7 LINE L1 -780 6916 6635 7 1026 308 260 100 103 chrX 57850493 57850793 -108799503 - L1MB7 LINE L1 -1153 4993 4695 6 1026 8533 79 1 0 chrX 57850787 57852755 -108797541 - L1_Mus1 LINE L1 0 6567 4599 7 1026 7473 8 0 0 chrX 57852849 57853721 -108796575 - L1Md_T LINE L1 0 6582 5711 7 1026 3177 11 0 0 chrX 57853717 57854094 -108796202 + L1Md_T LINE L1 5195 5571 -312 7 1026 371 308 57 23 chrX 57854094 57854270 -108796026 - L1MB7 LINE L1 -1513 4633 4452 6 1026 1810 223 34 11 chrX 57854280 57854638 -108795658 - ORR1D1 LTR MaLR 0 374 9 7 1026 346 228 44 0 chrX 57854646 57854760 -108795536 - L1MB7 LINE L1 -1707 4439 4321 6 1026 1563 231 109 69 chrX 57854875 57855106 -108795190 - RMER19C LTR ERVK 0 611 393 7 1026 1518 118 34 0 chrX 57855106 57855343 -108794953 + Lx LINE L1 6410 6654 0 7 1026 1563 231 109 69 chrX 57855343 57855605 -108794691 - RMER19C LTR ERVK -219 392 98 7 1026 1265 260 128 14 chrX 57855809 57856497 -108793799 - L1MB7 LINE L1 -1904 4242 3477 6 1026 337 240 31 77 chrX 57856601 57856707 -108793589 - MLT1A1 LTR MaLR -32 376 243 7 1026 277 281 25 50 chrX 57856832 57856952 -108793344 - L1MB1 LINE L1 -275 5893 5777 7 1026 3616 127 91 3 chrX 57857226 57857819 -108792477 + Lx4A LINE L1 6411 7055 -3 7 1026 268 300 14 41 chrX 57857834 57857980 -108792316 - L1MB7 LINE L1 -58 6126 5985 7 1026 927 261 132 29 chrX 57857993 57858537 -108791759 - L1MB7 LINE L1 -253 5931 5332 7 1026 1693 123 11 122 chrX 57858537 57858780 -108791516 - ORR1A4 LTR MaLR 0 329 108 7 1026 489 110 0 0 chrX 57858780 57858853 -108791443 + (TG)n Simple_repeat Simple_repeat 2 74 0 7 1026 1693 123 11 122 chrX 57858853 57858979 -108791317 - ORR1A4 LTR MaLR -222 107 1 7 1026 232 311 108 22 chrX 57859838 57860021 -108790275 + MIRc SINE MIR 14 212 -56 7 1026 1480 241 107 13 chrX 57860248 57860623 -108789673 - MTD LTR MaLR 0 419 10 7 1026 920 281 212 35 chrX 57860643 57861049 -108789247 + MTE-int LTR MaLR 546 1023 -557 7 1026 606 287 37 75 chrX 57861135 57861323 -108788973 + B3A SINE B2 1 181 -14 7 1026 215 79 26 0 chrX 57861326 57861364 -108788932 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 7 1026 904 47 148 8 chrX 57861366 57861494 -108788802 - B1_Mm SINE Alu 0 147 2 7 1026 1127 287 57 12 chrX 57861556 57862064 -108788232 + L1MC LINE L1 4414 4944 -1202 7 1026 446 305 0 45 chrX 57862081 57862215 -108788081 + ID_B1 SINE B4 91 218 -6 7 1026 7307 124 9 22 chrX 57862631 57863806 -108786490 + Lx2 LINE L1 5836 6995 -2 7 1026 675 184 78 35 chrX 57864064 57864205 -108786091 - B1_Mur1 SINE Alu 0 149 3 7 1026 522 268 110 29 chrX 57864441 57864614 -108785682 - MIR SINE MIR -70 192 6 7 1026 2270 117 3 0 chrX 57864682 57865008 -108785288 + ORR1A2 LTR MaLR 1 327 0 7 1026 384 389 70 36 chrX 57865205 57865648 -108784648 - L2a LINE L2 -24 3402 2945 7 1026 875 323 10 21 chrX 57865790 57866078 -108784218 + B4 SINE B4 2 286 -6 7 1026 285 250 42 32 chrX 57866091 57866186 -108784110 + (CATATA)n Simple_repeat Simple_repeat 1 96 0 7 1026 237 274 21 21 chrX 57866245 57866334 -108783962 - L2a LINE L2 -747 2672 2582 7 1026 1411 69 21 0 chrX 57866334 57866522 -108783774 + B2_Mm2 SINE B2 2 193 -2 7 1026 240 35 0 0 chrX 57866615 57866644 -108783652 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1026 1061 44 0 7 chrX 57866644 57866781 -108783515 - B1_Mm SINE Alu 0 147 12 7 1026 798 299 61 52 chrX 57866799 57867145 -108783151 - L2a LINE L2 -919 2500 2152 7 1026 236 261 0 0 chrX 57867204 57867250 -108783046 + PB1D7 SINE Alu 66 111 -9 7 1026 378 326 243 25 chrX 57867310 57867366 -108782930 - L2a LINE L2 -1536 1883 1828 7 1026 360 0 0 0 chrX 57867366 57867406 -108782890 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1026 253 185 88 44 chrX 57867406 57867474 -108782822 - ID4 SINE ID -10 73 3 7 1026 378 326 243 25 chrX 57867474 57867947 -108782349 - L2a LINE L2 -1592 1827 1238 7 1026 238 364 56 14 chrX 57868286 57868428 -108781868 + MLT1H2 LTR MaLR 100 247 -302 7 1026 369 255 139 72 chrX 57868460 57868660 -108781636 + MLT1H2 LTR MaLR 306 549 0 7 1026 204 291 172 20 chrX 57868660 57868811 -108781485 - L2a LINE L2 -2523 896 723 7 1026 358 289 21 0 chrX 57869586 57869683 -108780613 - BC1_Mm scRNA scRNA -40 112 14 7 1026 512 302 39 11 chrX 57869939 57870120 -108780176 + MIR SINE MIR 53 238 -24 7 1026 607 254 53 38 chrX 57870619 57870885 -108779411 - RLTR15 LTR ERVK -84 275 6 7 1026 333 280 177 27 chrX 57870977 57871197 -108779099 + Lx8 LINE L1 7216 7468 -5 7 1026 1141 68 0 7 chrX 57871201 57871349 -108778947 + B1_Mus1 SINE Alu 1 147 -1 7 1026 36240 30 0 0 chrX 57871585 57878218 -108772078 - L1Md_T LINE L1 0 6585 1 7 1026 395 21 0 0 chrX 57878402 57878449 -108771847 - RLTR47_MM LTR ERV1 -232 300 254 7 1026 7320 55 2 4 chrX 57878454 57879869 -108770427 - L1Md_F2 LINE L1 0 6582 5170 7 1026 1452 86 0 0 chrX 57879868 57880077 -108770219 + L1Md_F2 LINE L1 4930 5138 -745 7 1026 661 281 32 86 chrX 57880444 57880631 -108769665 + B3A SINE B2 5 181 -14 7 1026 646 275 22 37 chrX 57880793 57880832 -108769464 + L1M2 LINE L1 5289 5321 -991 7 1026 1346 219 52 24 chrX 57880832 57881201 -108769095 - MTE2a LTR MaLR 0 379 1 7 1026 646 275 22 37 chrX 57881201 57881433 -108768863 + L1M2 LINE L1 5322 5556 -756 7 1026 723 258 79 127 chrX 57881450 57881805 -108768491 - ORR1E LTR MaLR 0 359 22 7 1026 368 214 159 9 chrX 57881825 57881938 -108768358 + L1M2 LINE L1 5590 5719 -581 7 1026 301 264 71 79 chrX 57882550 57882690 -108767606 + L2c LINE L2 3235 3409 -17 7 1026 2380 137 29 16 chrX 57883996 57884374 -108765922 + Lx4B LINE L1 6668 7050 -8 7 1026 1168 81 0 0 chrX 57884651 57884799 -108765497 - B1_Mus1 SINE Alu 0 148 1 7 1026 462 312 21 28 chrX 57884913 57885055 -108765241 - B1F SINE Alu -7 142 2 7 1026 956 304 10 20 chrX 57885086 57885381 -108764915 - B4A SINE B4 0 292 1 7 1026 863 244 54 0 chrX 57885433 57885638 -108764658 - B3 SINE B2 0 216 1 7 1026 323 105 18 0 chrX 57885933 57885990 -108764306 + (TA)n Simple_repeat Simple_repeat 1 58 0 7 1026 2199 274 99 35 chrX 57886413 57886821 -108763475 + Charlie1a DNA MER1_type 14 463 -992 7 1026 7484 115 4 14 chrX 57886821 57887968 -108762328 - Lx2 LINE L1 0 6997 5862 7 1026 2199 274 99 35 chrX 57887968 57888298 -108761998 + Charlie1a DNA MER1_type 464 799 -656 7 1026 330 288 67 57 chrX 57888436 57888646 -108761650 - L1MB8 LINE L1 -177 6001 5790 7 1026 1055 135 0 0 chrX 57888746 57888894 -108761402 - B1_Mus1 SINE Alu 0 148 1 7 1026 485 197 25 8 chrX 57888985 57889103 -108761193 + MER2 DNA MER2_type 98 217 -128 7 1026 565 298 150 7 chrX 57889145 57889439 -108760857 + Charlie1a DNA MER1_type 811 1146 -309 7 1026 1565 38 5 0 chrX 57889465 57889651 -108760645 - B2_Mm1t SINE B2 -6 187 1 7 1026 412 257 0 38 chrX 57889695 57889800 -108760496 - PB1D10 SINE Alu 0 117 17 7 1026 183 42 0 0 chrX 57889819 57889843 -108760453 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1026 1138 78 0 0 chrX 57889844 57889986 -108760310 - B1_Mus2 SINE Alu -5 142 1 7 1026 255 31 0 0 chrX 57889995 57890027 -108760269 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 7 1026 420 39 0 0 chrX 57890027 57890078 -108760218 - B1_Mm SINE Alu -13 134 84 7 1026 1018 68 68 0 chrX 57890078 57890211 -108760085 + B1_Mm SINE Alu 3 144 -3 7 1026 420 20 0 0 chrX 57890211 57890260 -108760036 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 7 1026 405 198 16 23 chrX 57890590 57890719 -108759577 - Lx9 LINE L1 -1 7643 7516 7 1026 508 250 0 22 chrX 57890954 57891093 -108759203 - Lx9 LINE L1 -226 7418 7283 7 1026 309 135 0 2 chrX 57891098 57891144 -108759152 - ORR1A3 LTR MaLR -8 321 277 7 1026 389 157 19 38 chrX 57891144 57891250 -108759046 - Lx LINE L1 0 6654 6551 7 1026 285 231 0 103 chrX 57891250 57891290 -108759006 - ORR1A3 LTR MaLR -52 342 309 7 1026 1652 94 28 0 chrX 57891290 57891544 -108758752 - L1_Mur2 LINE L1 -1609 4268 4008 7 1026 1443 151 7 75 chrX 57891544 57891823 -108758473 - ORR1A3 LTR MaLR -65 261 2 7 1026 1223 235 3 20 chrX 57891824 57892119 -108758177 - Lx9 LINE L1 -358 7286 6997 7 1026 612 73 0 0 chrX 57892902 57892984 -108757312 + (TA)n Simple_repeat Simple_repeat 1 82 0 7 1026 215 327 118 27 chrX 57893084 57893194 -108757102 - ID_B1 SINE B4 -11 213 94 7 1026 3041 233 105 47 chrX 57893488 57894479 -108755817 - Lx7 LINE L1 -499 7197 6150 7 1026 1191 142 45 25 chrX 57894479 57894724 -108755572 - Lx7 LINE L1 -1793 5903 5654 7 1026 1771 219 58 2 chrX 57895024 57895418 -108754878 + MTD LTR MaLR 4 419 0 7 1026 271 267 7 43 chrX 57895883 57896024 -108754272 + A-rich Low_complexity Low_complexity 4 139 0 7 1026 226 318 120 63 chrX 57896176 57896367 -108753929 + LTR87 LTR ERVL? 24 225 -399 7 1026 2210 85 9 28 chrX 57896399 57896726 -108753570 - ORR1A4 LTR MaLR -8 321 1 7 1026 469 275 126 25 chrX 57897231 57897429 -108752867 - ID_B1 SINE B4 -5 219 2 7 1026 328 327 100 67 chrX 57897475 57897714 -108752582 + MIRc SINE MIR 3 249 -19 7 1026 220 120 20 20 chrX 57898546 57898597 -108751699 + GA-rich Low_complexity Low_complexity 4 54 0 7 1026 22 0 0 0 chrX 57898665 57898687 -108751609 + AT_rich Low_complexity Low_complexity 1 22 0 7 1026 250 333 130 22 chrX 57899374 57899604 -108750692 + MARNA DNA Mariner 34 288 -298 7 1026 543 299 108 9 chrX 57899835 57900048 -108750248 + MIR SINE MIR 23 256 -6 7 1026 684 211 259 0 chrX 57900989 57901155 -108749141 + B3 SINE B2 1 209 -7 7 1026 279 0 0 0 chrX 57901155 57901186 -108749110 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 7 1026 1175 281 73 39 chrX 57902020 57902272 -108748024 - MTEb LTR MaLR -6 373 110 7 1026 704 203 41 20 chrX 57902272 57902418 -108747878 - B1_Mur2 SINE Alu 0 149 1 7 1026 1175 281 73 39 chrX 57902418 57902520 -108747776 - MTEb LTR MaLR -270 109 7 7 1026 264 59 0 0 chrX 57902520 57902554 -108747742 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1026 264 59 0 0 chrX 57902554 57902588 -108747708 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1026 1071 194 87 5 chrX 57903006 57903213 -108747083 + URR1B DNA MER1_type 1 224 -1 7 1026 200 132 26 0 chrX 57903396 57903434 -108746862 + A-rich Low_complexity Low_complexity 4 42 0 7 1026 462 303 7 29 chrX 57903563 57903699 -108746597 - RSINE1 SINE B4 -29 136 4 7 1026 497 252 41 16 chrX 57903969 57904090 -108746206 + RSINE1 SINE B4 30 153 -12 8 1026 267 31 0 0 chrX 57904093 57904125 -108746171 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 1026 693 268 117 49 chrX 57904300 57904794 -108745502 - L1MB8 LINE L1 -226 5952 5425 8 1026 248 284 90 0 chrX 57904805 57904872 -108745424 - ID4_ SINE ID -10 73 1 8 1026 415 271 0 27 chrX 57904880 57904990 -108745306 - PB1D10 SINE Alu -8 109 3 8 1026 302 255 53 0 chrX 57904991 57905085 -108745211 - L1MB8 LINE L1 -733 5441 5343 8 1026 1784 243 22 19 chrX 57905086 57905455 -108744841 - MTD LTR MaLR -2 417 48 8 1026 234 307 51 19 chrX 57905475 57905631 -108744665 - L1MB8 LINE L1 -798 5348 5188 8 1026 557 140 0 0 chrX 57905629 57905722 -108744574 - RMER1C Other Other 0 1342 1250 8 1026 215 320 2 0 chrX 57906377 57906433 -108743863 - L3 LINE CR1 -15 4493 4425 8 1026 317 230 0 75 chrX 57906982 57907052 -108743244 + MTEa LTR MaLR 3 66 -313 8 1026 1639 184 144 33 chrX 57907052 57907546 -108742750 - RMER4B LTR ERVK 0 466 1 8 1026 894 247 156 7 chrX 57907551 57907820 -108742476 + MTEa LTR MaLR 71 379 0 8 1026 235 356 44 44 chrX 57908520 57908655 -108741641 - L2c LINE L2 -234 3153 3019 8 1026 210 150 0 0 chrX 57908956 57908996 -108741300 + (CTG)n Simple_repeat Simple_repeat 2 41 0 8 1026 213 39 0 0 chrX 57908998 57909024 -108741272 + (ATG)n Simple_repeat Simple_repeat 1 26 0 8 1026 861 174 0 0 chrX 57909563 57909724 -108740572 + (TA)n Simple_repeat Simple_repeat 2 162 0 8 1026 248 333 86 53 chrX 57909729 57909938 -108740358 + MIRc SINE MIR 50 265 -3 8 1026 789 132 80 14 chrX 57912196 57912334 -108737962 + B1_Mus1 SINE Alu 2 148 0 8 1026 345 297 7 13 chrX 57912362 57912512 -108737784 - Lx8 LINE L1 -1545 5928 5780 8 1026 6670 176 49 14 chrX 57912498 57914001 -108736295 - L1_Mur3 LINE L1 -2779 3101 1547 8 1026 365 227 46 46 chrX 57913991 57914208 -108736088 - L1_Mur3 LINE L1 -6385 1343 1127 8 1026 240 59 0 0 chrX 57914219 57914253 -108736043 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1026 1567 67 0 0 chrX 57914506 57914714 -108735582 - L1Md_F2 LINE L1 -12 6570 6363 8 1026 1037 208 7 15 chrX 57914717 57914990 -108735306 - L1_Mur3 LINE L1 -6615 1113 843 8 1026 560 187 8 24 chrX 57915226 57915352 -108734944 - Lx9 LINE L1 -459 7185 7062 8 1026 1280 195 41 20 chrX 57915392 57915733 -108734563 - Lx8 LINE L1 -628 5219 4872 8 1026 2247 237 145 40 chrX 57915737 57916636 -108733660 - L1_Mur3 LINE L1 -588 5292 4269 8 1026 793 258 74 6 chrX 57916764 57917054 -108733242 - L1MA4 LINE L1 -382 5918 5545 8 1026 883 291 29 106 chrX 57917056 57917433 -108732863 - MTD LTR MaLR -71 348 1 8 1026 207 267 22 0 chrX 57917733 57917763 -108732533 + A-rich Low_complexity Low_complexity 6 35 0 8 1026 4920 37 0 7 chrX 57917763 57918417 -108731879 + L1Md_F2 LINE L1 5990 6582 0 8 1026 39112 9 0 6 chrX 57918613 57924771 -108725525 - L1Md_A LINE L1 0 6582 469 8 1026 882 246 68 10 chrX 57924819 57925024 -108725272 - ID_B1 SINE B4 -2 222 6 8 1026 1118 126 0 67 chrX 57925052 57925086 -108725210 - B2_Mm2 SINE B2 -13 182 160 8 1026 401 76 15 0 chrX 57925086 57925152 -108725144 + (TTTA)n Simple_repeat Simple_repeat 3 69 0 8 1026 1118 126 0 67 chrX 57925152 57925312 -108724984 - B2_Mm2 SINE B2 -36 159 1 8 1026 221 333 97 0 chrX 57925509 57925623 -108724673 + MamSINE1 SINE tRNA 3 127 -163 8 1026 602 172 16 0 chrX 57925882 57926004 -108724292 + CT-rich Low_complexity Low_complexity 3 126 0 8 1026 6927 88 15 9 chrX 57926012 57927026 -108723270 - Lx LINE L1 -6 6648 5629 8 1026 556 320 50 84 chrX 57927922 57928219 -108722077 + ORR1E LTR MaLR 1 282 -77 8 1026 234 0 0 0 chrX 57928219 57928245 -108722051 + (CAA)n Simple_repeat Simple_repeat 2 27 0 8 1026 556 320 50 84 chrX 57928245 57928268 -108722028 + ORR1E LTR MaLR 283 309 -50 8 1026 492 18 0 0 chrX 57928609 57928666 -108721630 + (TC)n Simple_repeat Simple_repeat 1 57 0 8 1026 199 211 19 37 chrX 57929113 57929167 -108721129 - MIRc SINE MIR -107 161 109 8 1026 270 0 0 0 chrX 57929391 57929421 -108720875 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 1026 4421 57 0 118 chrX 57930107 57930843 -108719453 - L1Md_F2 LINE L1 -14 6568 5920 8 1026 300 154 0 0 chrX 57931995 57932047 -108718249 + A-rich Low_complexity Low_complexity 1 52 0 8 1026 191 256 253 11 chrX 57932340 57932431 -108717865 - MIRb SINE MIR -118 150 38 8 1026 446 145 0 0 chrX 57933696 57933772 -108716524 + Lx3C LINE L1 6896 6971 -5 8 1027 519 291 44 6 chrX 57933969 57934152 -108716144 - MER53 DNA hAT -3 190 1 8 1027 234 172 91 30 chrX 57935106 57935172 -108715124 - L2c LINE L2 -80 3307 3238 8 1027 430 250 0 23 chrX 57935981 57936067 -108714229 - PB1D7 SINE Alu -1 119 36 8 1027 357 260 46 46 chrX 57936411 57936520 -108713776 + MamRep1161 DNA TcMar 3 111 -846 8 1027 273 89 0 0 chrX 57936521 57936566 -108713730 + (T)n Simple_repeat Simple_repeat 1 45 0 8 1027 219 45 43 22 chrX 57937028 57937074 -108713222 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 8 1027 278 306 42 0 chrX 57937173 57937245 -108713051 - MER2 DNA MER2_type -1 344 270 8 1027 708 328 54 29 chrX 57937262 57937541 -108712755 + B4 SINE B4 6 291 -1 8 1027 198 103 0 0 chrX 57937541 57937570 -108712726 + (TA)n Simple_repeat Simple_repeat 1 29 0 8 1027 466 300 118 76 chrX 57937600 57937829 -108712467 - MER2 DNA MER2_type -44 301 53 8 1027 783 191 13 13 chrX 57937829 57937978 -108712318 - B1_Mur1 SINE Alu 0 149 1 8 1027 466 300 118 76 chrX 57937978 57938037 -108712259 - MER2 DNA MER2_type -293 52 1 8 1027 1205 61 43 0 chrX 57938247 57938410 -108711886 + B2_Mm1t SINE B2 1 170 -23 8 1027 333 0 0 0 chrX 57938410 57938447 -108711849 + (GA)n Simple_repeat Simple_repeat 2 38 0 8 1027 747 247 18 0 chrX 57938451 57938617 -108711679 + ID_B1 SINE B4 1 169 -55 8 1027 303 266 89 50 chrX 57938813 57938987 -108711309 + MER63A DNA AcHobo 1 182 -28 8 1027 188 306 0 16 chrX 57939112 57939175 -108711121 + L4 LINE RTE 1203 1264 -765 8 1027 851 266 33 24 chrX 57939465 57939677 -108710619 + B4 SINE B4 6 219 -73 8 1027 270 310 16 103 chrX 57939564 57939690 -108710606 + B1_Mur3 SINE Alu 23 137 -12 8 1027 366 396 16 16 chrX 57939873 57940063 -108710233 + MIR SINE MIR 45 234 -28 8 1027 298 301 25 6 chrX 57940694 57940851 -108709445 - L1MA7 LINE L1 0 6291 6132 8 1027 380 288 53 0 chrX 57940861 57940993 -108709303 + MER53 DNA hAT 52 190 -3 8 1027 768 77 0 0 chrX 57941256 57941360 -108708936 + (TA)n Simple_repeat Simple_repeat 2 105 0 8 1027 205 300 17 0 chrX 57941390 57941450 -108708846 + MER91B DNA Tip100 102 162 -28 8 1027 318 26 0 0 chrX 57941676 57941715 -108708581 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 1027 798 292 23 39 chrX 57941769 57942029 -108708267 + MIRb SINE MIR 13 268 0 8 1027 245 247 20 51 chrX 57942053 57942151 -108708145 + Tigger15a DNA TcMar 278 372 -343 8 1027 400 298 50 6 chrX 57942156 57942338 -108707958 + Tigger15a DNA TcMar 477 666 -49 8 1027 208 208 42 0 chrX 57942759 57942807 -108707489 + (CATG)n Simple_repeat Simple_repeat 1 50 0 8 1027 413 261 38 55 chrX 57942947 57943084 -108707212 + B4 SINE B4 1 146 -19 8 1027 480 89 0 0 chrX 57943084 57943163 -108707133 + (CTCA)n Simple_repeat Simple_repeat 4 82 0 8 1027 1933 150 97 39 chrX 57943164 57943546 -108706750 - MTB_Mm LTR MaLR -1 406 3 8 1027 383 302 89 113 chrX 57943546 57943574 -108706722 + RSINE1 SINE B4 147 165 0 8 1027 1588 240 79 110 chrX 57944440 57945012 -108705284 - RMER15 LTR ERVL 0 575 22 8 1027 224 100 0 24 chrX 57946296 57946337 -108703959 + (GAAA)n Simple_repeat Simple_repeat 1 40 0 8 1027 875 155 43 6 chrX 57946402 57946564 -108703732 - URR1A DNA MER1_type 0 226 59 8 1027 189 0 0 0 chrX 57947049 57947070 -108703226 + (GTTTG)n Simple_repeat Simple_repeat 2 22 0 8 1027 216 0 0 0 chrX 57947073 57947097 -108703199 + (T)n Simple_repeat Simple_repeat 1 24 0 8 1027 353 258 56 64 chrX 57947619 57947789 -108702507 - MIRb SINE MIR -80 188 22 8 1027 2050 104 64 13 chrX 57948307 57948618 -108701678 - ORR1A2 LTR MaLR 0 327 1 8 1027 1145 111 52 0 chrX 57949046 57949218 -108701078 - URR1B DNA MER1_type 0 225 45 8 1027 1376 216 26 31 chrX 57949894 57950216 -108700080 - ORR1B2 LTR MaLR -44 315 1 8 1027 4897 182 60 32 chrX 57950216 57951535 -108698761 - ORR1B2-int LTR MaLR 0 1509 97 8 1027 463 64 51 0 chrX 57951535 57951613 -108698683 - L1Md_F2 LINE L1 -1 6581 6500 8 1027 2513 44 0 0 chrX 57951614 57951932 -108698364 + L1_Mm LINE L1 5243 5560 -323 8 1027 692 109 0 0 chrX 57951932 57952033 -108698263 - ORR1B2-int LTR MaLR -1407 102 2 8 1027 2087 141 34 9 chrX 57952038 57952388 -108697908 - ORR1B2 LTR MaLR -8 359 1 8 1027 4695 63 5 3 chrX 57952712 57953330 -108696966 - L1_Mus2 LINE L1 0 6566 5948 8 1027 364 252 8 32 chrX 57953501 57953624 -108696672 + Lx9 LINE L1 7351 7470 -174 8 1027 432 0 0 0 chrX 57953847 57953895 -108696401 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 1027 396 302 144 0 chrX 57954112 57954314 -108695982 + L1MC LINE L1 5485 5715 -2167 8 1027 281 319 0 0 chrX 57955775 57955844 -108694452 + RSINE1 SINE B4 13 81 -84 8 1027 341 231 135 0 chrX 57956025 57956181 -108694115 - L1MC3 LINE L1 -24 7761 7585 8 1027 391 294 82 10 chrX 57956286 57956482 -108693814 - L1MC3 LINE L1 -228 7557 7348 8 1027 258 56 0 0 chrX 57956487 57956523 -108693773 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 8 1027 323 303 6 50 chrX 57956622 57956734 -108693562 + polypyrimidine Low_complexity Low_complexity 50 156 0 8 1027 1181 197 82 38 chrX 57956734 57957125 -108693171 + RMER17C LTR ERVK 3 410 0 8 1027 287 361 12 17 chrX 57957125 57957233 -108693063 + C-rich Low_complexity Low_complexity 4 113 0 8 1027 397 281 23 34 chrX 57957244 57957421 -108692875 + CT-rich Low_complexity Low_complexity 4 178 0 8 1027 472 283 107 22 chrX 57957440 57957699 -108692597 - L1MC3 LINE L1 -1101 6894 6590 8 1027 374 276 172 45 chrX 57958050 57958264 -108692032 - MTC LTR MaLR -61 339 134 8 1027 688 221 7 7 chrX 57958699 57958845 -108691451 - B3 SINE B2 -8 208 63 8 1027 441 0 0 0 chrX 57959212 57959261 -108691035 + (CA)n Simple_repeat Simple_repeat 1 49 0 8 1027 22 35 0 0 chrX 57959393 57959422 -108690874 + AT_rich Low_complexity Low_complexity 1 29 0 8 1027 387 0 0 0 chrX 57960949 57960992 -108689304 + (TAA)n Simple_repeat Simple_repeat 3 45 0 8 1027 343 145 29 0 chrX 57960992 57961061 -108689235 - Lx6 LINE L1 -670 6790 6720 8 1027 3824 226 69 50 chrX 57961449 57962747 -108687549 - L1_Rod LINE L1 -1050 4797 3475 8 1027 2627 177 133 27 chrX 57962737 57963482 -108686814 - L1_Rod LINE L1 -3588 2259 1433 8 1027 252 77 0 0 chrX 57963482 57963521 -108686775 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 9 1027 2627 177 133 27 chrX 57963521 57963547 -108686749 - L1_Rod LINE L1 -4415 1432 1407 8 1027 248 271 0 0 chrX 57963595 57963643 -108686653 + L2b LINE L2 3291 3338 -37 9 1027 335 294 24 0 chrX 57963922 57964007 -108686289 + MamRep137 DNA TcMar? 351 437 -7 9 1027 323 340 24 49 chrX 57964216 57964380 -108685916 - MIRb SINE MIR -14 254 95 9 1027 181 328 43 29 chrX 57964389 57964458 -108685838 + L2b LINE L2 3339 3408 -18 9 1027 6746 114 34 59 chrX 57964874 57965635 -108684661 + Lx4A LINE L1 4685 5450 -427 9 1027 1020 93 0 21 chrX 57965635 57965777 -108684519 + B1_Mus1 SINE Alu 1 139 -9 9 1027 6746 113 16 29 chrX 57965777 57966380 -108683916 + Lx4A LINE L1 5451 6023 -1035 9 1027 2994 70 48 9 chrX 57966380 57966800 -108683496 + Lx3_Mus LINE L1 6573 7008 -1 9 1027 6243 132 45 4 chrX 57966810 57967807 -108682489 + Lx4A LINE L1 6021 7058 0 9 1027 1109 259 108 42 chrX 57967944 57968396 -108681900 - Lx9 LINE L1 -174 7470 6989 9 1027 274 276 39 39 chrX 57968402 57968504 -108681792 - Lx9 LINE L1 -1734 5910 5809 9 1027 212 311 131 0 chrX 57968720 57968781 -108681515 + ID4 SINE ID 1 69 -14 9 1027 213 39 0 0 chrX 57968784 57968810 -108681486 + (CA)n Simple_repeat Simple_repeat 2 27 0 9 1027 237 185 0 0 chrX 57968829 57968894 -108681402 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 9 1027 398 307 224 23 chrX 57969010 57969273 -108681023 + L1MC4a LINE L1 5583 5898 -1984 9 1027 242 344 21 10 chrX 57969473 57969570 -108680726 - MIRc SINE MIR -157 111 14 9 1027 343 302 50 41 chrX 57969683 57969804 -108680492 + MIRb SINE MIR 110 231 -37 9 1027 180 370 182 17 chrX 57969944 57970120 -108680176 + MIRb SINE MIR 38 242 -26 9 1027 368 280 149 34 chrX 57970509 57970657 -108679639 - MER20 DNA MER1_type -53 166 2 9 1027 347 152 20 12 chrX 57970657 57970724 -108679572 + B1_Mus2 SINE Alu 83 148 -1 9 1027 360 0 0 0 chrX 57973677 57973717 -108676579 + (CA)n Simple_repeat Simple_repeat 1 40 0 9 1027 227 302 44 55 chrX 57973990 57974081 -108676215 - L2b LINE L2 -8 3367 3278 9 1027 435 222 103 17 chrX 57974112 57974286 -108676010 + MER53 DNA hAT 1 189 -4 9 1027 221 83 28 0 chrX 57974567 57974603 -108675693 + (ATTG)n Simple_repeat Simple_repeat 3 39 0 9 1027 281 305 178 0 chrX 57975019 57975137 -108675159 - MIRb SINE MIR -26 242 104 9 1027 1142 121 111 8 chrX 57975599 57975833 -108674463 - Lx2A1 LINE L1 -767 6241 5984 9 1027 1795 131 116 28 chrX 57975827 57976189 -108674107 + Lx2 LINE L1 6604 6997 0 9 1027 825 227 27 36 chrX 57976369 57976593 -108673703 + ID_B1 SINE B4 3 224 0 9 1027 276 123 0 0 chrX 57976593 57976644 -108673652 + (A)n Simple_repeat Simple_repeat 1 51 0 9 1027 21 0 0 0 chrX 57977069 57977090 -108673206 + AT_rich Low_complexity Low_complexity 1 21 0 9 1027 37 0 0 0 chrX 57977163 57977200 -108673096 + AT_rich Low_complexity Low_complexity 1 37 0 9 1027 385 152 0 0 chrX 57977255 57977314 -108672982 - B3A SINE B2 -139 59 1 9 1027 623 315 27 0 chrX 57977630 57977779 -108672517 + ID_B1 SINE B4 3 155 -69 9 1027 1155 260 37 78 chrX 57977783 57978115 -108672181 + MTE2a LTR MaLR 10 342 -77 9 1027 1193 111 12 0 chrX 57978115 57978287 -108672009 + B2_Mm1t SINE B2 1 174 -19 9 1027 1155 257 27 74 chrX 57978287 57978368 -108671928 + MTE2a LTR MaLR 307 376 -3 9 1027 272 196 0 0 chrX 57978396 57978447 -108671849 + ID_B1 SINE B4 169 219 -5 9 1027 383 130 0 13 chrX 57978493 57978571 -108671725 + (TTGG)n Simple_repeat Simple_repeat 2 78 0 9 1027 457 77 25 13 chrX 57979398 57979477 -108670819 + (TTTTC)n Simple_repeat Simple_repeat 5 84 0 9 1027 201 147 0 0 chrX 57979473 57979507 -108670789 + (TCTCCC)n Simple_repeat Simple_repeat 4 37 0 9 1027 510 233 139 0 chrX 57980810 57980939 -108669357 + B1_Mur1 SINE Alu 3 149 0 9 1027 539 201 82 44 chrX 57981117 57981252 -108669044 - B1_Mus1 SINE Alu -6 142 3 9 1027 1229 97 16 11 chrX 57981441 57981629 -108668667 - B2_Mm1t SINE B2 -3 190 2 9 1027 897 327 114 57 chrX 57981852 57982507 -108667789 + Tigger6a DNA MER2_type 371 1063 -20 9 1027 258 313 0 80 chrX 57982553 57982678 -108667618 - Lx8 LINE L1 -444 7029 6915 9 1027 300 355 0 18 chrX 57982709 57982818 -108667478 - PB1D10 SINE Alu -5 112 6 9 1027 847 157 14 21 chrX 57983032 57983175 -108667121 + B1_Mur3 SINE Alu 1 142 -7 9 1027 239 365 105 55 chrX 57983347 57983547 -108666749 + MIRb SINE MIR 59 268 0 9 1027 719 291 25 10 chrX 57983650 57983851 -108666445 + RMER15 LTR ERVL 275 478 -97 9 1027 501 62 0 0 chrX 57983886 57983951 -108666345 + (TCCC)n Simple_repeat Simple_repeat 4 68 0 9 1027 192 77 0 0 chrX 57983952 57983978 -108666318 + (TTTTC)n Simple_repeat Simple_repeat 2 27 0 9 1027 284 311 93 19 chrX 57984182 57984290 -108666006 + L2b LINE L2 3240 3355 -20 9 1027 960 313 70 45 chrX 57984848 57985805 -108664491 + L1_Rod LINE L1 4730 5710 -137 9 1027 378 283 40 0 chrX 57985810 57985909 -108664387 + RSINE1 SINE B4 4 106 -59 9 1027 4194 209 20 12 chrX 57985948 57986859 -108663437 - Lx7 LINE L1 -1173 6523 5606 9 1027 1106 248 58 108 chrX 57986980 57987414 -108662882 - RMER4A LTR ERVK 0 466 55 9 1027 297 0 0 0 chrX 57987438 57987471 -108662825 + (TG)n Simple_repeat Simple_repeat 1 33 0 9 1027 779 295 36 0 chrX 57987665 57987858 -108662438 + ID_B1 SINE B4 1 200 -24 9 1027 1063 89 7 0 chrX 57988070 57988216 -108662080 - B1_Mm SINE Alu 0 147 1 9 1027 190 343 116 29 chrX 57988366 57988504 -108661792 + MIR SINE MIR 103 252 -10 9 1027 596 13 0 0 chrX 57989250 57989327 -108660969 - L1Md_F3 LINE L1 -2 6582 6506 9 1027 773 257 55 45 chrX 57989437 57989747 -108660549 - L1MD LINE L1 -1082 5064 4752 9 1027 480 269 20 88 chrX 57989770 57989917 -108660379 - B1_Mur1 SINE Alu -1 148 12 9 1027 813 203 0 0 chrX 57989923 57990071 -108660225 - B1_Mur3 SINE Alu -1 148 1 9 1027 374 276 121 0 chrX 57990081 57990280 -108660016 - L1MD LINE L1 -1438 4708 4486 9 1027 475 295 39 8 chrX 57990325 57990455 -108659841 - RSINE1 SINE B4 -21 144 11 9 1027 617 198 8 65 chrX 57990428 57990552 -108659744 - B1_Mur3 SINE Alu -32 117 1 9 1027 362 184 0 182 chrX 57990442 57990568 -108659728 - MT2B LTR ERVL -344 257 155 9 1027 355 317 30 0 chrX 57990616 57990717 -108659579 - RSINE1 SINE B4 -41 124 21 9 1027 436 292 72 92 chrX 57990726 57990975 -108659321 - L1MD LINE L1 -2131 4015 3772 9 1027 979 238 0 20 chrX 57991294 57991539 -108658757 - Lx6 LINE L1 -26 7434 7195 9 1027 633 206 8 8 chrX 57991560 57991687 -108658609 - Lx6 LINE L1 -381 7079 6953 9 1027 252 228 31 61 chrX 57991711 57991809 -108658487 - MER34A1 LTR ERV1 -484 103 9 9 1027 450 0 0 0 chrX 57991938 57991988 -108658308 + (TA)n Simple_repeat Simple_repeat 2 51 0 9 1027 298 282 82 40 chrX 57991996 57992400 -108657896 - L1MD LINE L1 -2576 3570 3155 9 1027 226 218 58 93 chrX 57992581 57992667 -108657629 - RLTR43A LTR ERVK -91 273 191 9 1027 1461 251 29 31 chrX 57992694 57993207 -108657089 - L1MC1 LINE L1 -127 6206 5695 9 1027 282 316 57 87 chrX 57993212 57993583 -108656713 - MLT1A1 LTR MaLR -4 404 1 9 1027 815 245 148 26 chrX 57993692 57994318 -108655978 - L1MC1 LINE L1 -798 5535 4840 9 1027 599 260 58 7 chrX 57994572 57994727 -108655569 + MER5A DNA MER1_type 21 183 -6 9 1027 265 360 14 27 chrX 57998633 57998794 -108651502 - MIRb SINE MIR -1 261 107 9 1027 252 322 69 95 chrX 57999034 57999223 -108651073 + ORR1E LTR MaLR 73 256 -103 9 1027 193 98 0 47 chrX 57999308 57999351 -108650945 + (CAAAA)n Simple_repeat Simple_repeat 3 43 0 9 1027 483 63 0 0 chrX 57999448 57999511 -108650785 + (TG)n Simple_repeat Simple_repeat 2 64 0 9 1027 194 220 0 17 chrX 58000069 58000129 -108650167 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1027 236 208 69 0 chrX 58000212 58000284 -108650012 - L1M4 LINE L1 -3300 2846 2770 2 1027 902 41 16 0 chrX 58000289 58000410 -108649886 - B1_Mur4 SINE Alu 0 150 28 3 1027 409 277 67 38 chrX 58000411 58000651 -108649645 - L1M4 LINE L1 -3372 2774 2528 2 1027 533 305 67 12 chrX 58000935 58001493 -108648803 + L1MB8 LINE L1 4716 5331 -815 4 1027 347 127 16 0 chrX 58001525 58001588 -108648708 + (CA)n Simple_repeat Simple_repeat 2 65 0 5 1027 289 327 33 0 chrX 58001665 58001818 -108648478 + L1MB8 LINE L1 5732 5889 -289 4 1027 526 349 0 46 chrX 58001883 58002036 -108648260 - RSINE1 SINE B4 -6 159 14 6 1027 284 318 45 0 chrX 58002122 58002210 -108648086 - L2 LINE L2 -662 2757 2666 7 1027 2543 17 13 0 chrX 58002410 58002708 -108647588 + L1Md_F3 LINE L1 6282 6583 -1 8 1027 244 329 35 14 chrX 58003871 58004016 -108646280 + Charlie19a DNA Charlie 31 178 -208 9 1027 1757 226 41 22 chrX 58004511 58004922 -108645374 + MTD LTR MaLR 1 419 0 1 1027 584 303 43 9 chrX 58004950 58005183 -108645113 + L1MD2 LINE L1 5614 5854 -505 1 1027 21 0 0 0 chrX 58005589 58005610 -108644686 + AT_rich Low_complexity Low_complexity 1 21 0 1 1027 609 248 8 0 chrX 58005615 58005740 -108644556 - RSINE1 SINE B4 -29 136 11 1 1027 259 294 0 11 chrX 58005790 58005883 -108644413 + L1MC LINE L1 4724 4815 -1331 1 1027 1338 87 11 0 chrX 58005948 58006132 -108644164 - B2_Mm1t SINE B2 -7 186 1 1 1027 1131 88 0 0 chrX 58006132 58006280 -108644016 - B1_Mus1 SINE Alu 0 148 1 1 1027 1374 80 16 0 chrX 58006291 58006479 -108643817 - B2_Mm2 SINE B2 -4 191 1 1 1027 412 207 0 85 chrX 58006553 58006706 -108643590 + L1MC LINE L1 4824 4963 -1183 1 1027 520 252 30 0 chrX 58006734 58006865 -108643431 + L1M4 LINE L1 5335 5469 -715 1 1027 322 279 12 12 chrX 58006909 58006989 -108643307 + ID_B1 SINE B4 124 203 -21 1 1027 886 228 80 38 chrX 58007037 58007302 -108642994 + L1MC LINE L1 5006 5290 -856 1 1027 185 0 40 0 chrX 58007302 58007327 -108642969 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 1027 886 206 303 8 chrX 58007327 58007537 -108642759 + L1MC LINE L1 5291 5554 -790 1 1027 482 280 45 49 chrX 58007550 58007734 -108642562 - L1MB8 LINE L1 -121 6057 5871 2 1027 673 225 35 0 chrX 58007734 58007876 -108642420 + B1F1 SINE Alu 3 149 0 2 1027 482 280 45 49 chrX 58007876 58007935 -108642361 - L1MB8 LINE L1 -308 5870 5816 2 1027 253 282 92 72 chrX 58008070 58008223 -108642073 - MLT2B1 LTR ERVL 0 567 412 2 1027 363 243 9 55 chrX 58008310 58008419 -108641877 - MTEa LTR MaLR -275 104 1 2 1027 596 281 105 42 chrX 58008511 58008864 -108641432 + MTEa LTR MaLR 1 375 -4 2 1027 928 256 190 51 chrX 58008924 58009145 -108641151 - L1MA5 LINE L1 -294 6006 5780 2 1027 225 65 0 0 chrX 58009145 58009176 -108641120 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1027 928 256 190 51 chrX 58009176 58009539 -108640757 - L1MA5 LINE L1 -521 5779 5341 2 1027 286 349 69 8 chrX 58009627 58009757 -108640539 + B1F SINE Alu 1 138 -11 2 1027 1074 130 0 0 chrX 58010036 58010251 -108640045 + (GAA)n Simple_repeat Simple_repeat 1 215 0 2 1027 429 20 0 0 chrX 58010295 58010345 -108639951 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1027 454 282 52 42 chrX 58010361 58010650 -108639646 - L1MB8 LINE L1 -1472 4674 4383 2 1027 710 224 152 5 chrX 58010689 58010873 -108639423 + B3 SINE B2 1 211 -5 3 1027 1070 36 49 28 chrX 58010898 58010911 -108639385 - B1_Mm SINE Alu -2 145 135 3 1027 242 29 29 0 chrX 58010911 58010946 -108639350 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 3 1027 1070 36 49 28 chrX 58010946 58011074 -108639222 - B1_Mm SINE Alu -13 134 1 3 1027 30 69 0 0 chrX 58011080 58011138 -108639158 + AT_rich Low_complexity Low_complexity 1 58 0 3 1027 522 284 0 0 chrX 58011178 58011280 -108639016 + B1_Mur2 SINE Alu 2 103 -46 3 1027 407 52 17 0 chrX 58011285 58011343 -108638953 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 3 1027 1225 51 0 196 chrX 58011427 58011543 -108638753 - B2_Mm2 SINE B2 -19 176 90 3 1027 1194 48 0 0 chrX 58011543 58011688 -108638608 - B1_Mus1 SINE Alu 0 148 4 3 1027 1225 51 0 196 chrX 58011688 58011790 -108638506 - B2_Mm2 SINE B2 -106 89 1 3 1027 385 270 86 10 chrX 58011792 58011990 -108638306 - L1MA5 LINE L1 -1 6299 6087 3 1027 2206 127 157 3 chrX 58012007 58012371 -108637925 - MTC LTR MaLR 0 421 2 4 1027 186 43 0 0 chrX 58012448 58012471 -108637825 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 4 1027 289 240 37 90 chrX 58012472 58012660 -108637636 - L1MA5 LINE L1 -365 5932 5755 3 1027 535 326 96 58 chrX 58012685 58013167 -108637129 - L2a LINE L2 -156 3270 2785 4 1027 219 103 0 0 chrX 58013179 58013218 -108637078 + (A)n Simple_repeat Simple_repeat 1 39 0 4 1027 1136 285 88 35 chrX 58013236 58013636 -108636660 + Tigger6a DNA MER2_type 25 445 -638 4 1027 375 256 116 0 chrX 58013826 58013947 -108636349 - Tigger5 DNA MER2_type -2212 194 60 4 1027 399 272 0 48 chrX 58013971 58014088 -108636208 - PB1D7 SINE Alu -1 119 8 4 1027 181 97 96 14 chrX 58014189 58014262 -108636034 + (TA)n Simple_repeat Simple_repeat 1 79 0 4 1027 255 304 33 0 chrX 58014286 58014378 -108635918 + MIR SINE MIR 167 261 -1 4 1027 417 274 43 31 chrX 58014419 58014581 -108635715 + RSINE1 SINE B4 2 165 0 4 1027 222 256 0 0 chrX 58014779 58014857 -108635439 + (TA)n Simple_repeat Simple_repeat 1 78 0 5 1027 684 226 76 22 chrX 58014994 58015179 -108635117 - B3A SINE B2 -3 195 1 5 1027 311 293 0 0 chrX 58015330 58015405 -108634891 - L1MC LINE L1 -2224 5658 5584 5 1027 680 330 22 0 chrX 58015464 58015649 -108634647 + B3 SINE B2 1 189 -27 5 1027 1126 206 12 55 chrX 58015655 58015999 -108634297 - L1_Rod LINE L1 -728 5119 4791 5 1027 1601 169 47 13 chrX 58015996 58016441 -108633855 - L1_Rod LINE L1 -4223 1624 1169 5 1027 491 296 62 29 chrX 58016440 58016845 -108633451 - L1_Rod LINE L1 -6840 768 450 5 1027 754 154 86 22 chrX 58017030 58017169 -108633127 - B1_Mur3 SINE Alu -1 148 1 5 1027 299 212 158 3 chrX 58017210 58017349 -108632947 - L1M5 LINE L1 -786 5454 5293 5 1027 1067 143 28 11 chrX 58017384 58017561 -108632735 + B2_Mm2 SINE B2 15 194 -1 5 1027 870 192 0 0 chrX 58017677 58017823 -108632473 - B1_Mur2 SINE Alu -1 148 3 5 1027 452 331 0 0 chrX 58018734 58018876 -108631420 + B1F1 SINE Alu 1 142 -7 5 1027 1119 186 18 18 chrX 58018901 58019051 -108631245 + URR1B DNA MER1_type 1 154 -71 6 1027 1277 97 5 5 chrX 58019051 58019237 -108631059 + B2_Mm1t SINE B2 1 186 -7 6 1027 1119 186 18 18 chrX 58019237 58019311 -108630985 + URR1B DNA MER1_type 155 225 0 6 1027 293 309 40 113 chrX 58019501 58019686 -108630610 + B4A SINE B4 88 271 -21 6 1027 341 86 0 17 chrX 58019689 58019748 -108630548 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 1027 375 23 0 0 chrX 58020476 58020520 -108629776 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1027 339 306 41 0 chrX 58020529 58020627 -108629669 - PB1D10 SINE Alu -12 105 4 6 1027 204 73 23 68 chrX 58020656 58020700 -108629596 + T-rich Low_complexity Low_complexity 1 42 0 6 1027 237 336 129 0 chrX 58020948 58021088 -108629208 + L3 LINE CR1 2138 2295 -2194 6 1027 200 378 0 0 chrX 58021154 58021244 -108629052 + L3 LINE CR1 2411 2500 -1989 6 1027 408 328 50 17 chrX 58021256 58021436 -108628860 - L2a LINE L2 -263 3163 2978 6 1027 647 345 85 47 chrX 58021497 58022024 -108628272 - L2a LINE L2 -580 2839 2293 6 1027 208 77 25 25 chrX 58022284 58022324 -108627972 + (TC)n Simple_repeat Simple_repeat 1 40 0 6 1027 411 220 78 20 chrX 58022442 58022544 -108627752 + RodERV21-int LTR ERV1 16 123 -4868 7 1027 312 265 71 80 chrX 58022722 58022960 -108627336 - RodERV21-int LTR ERV1 -3113 3978 3743 7 1027 5624 243 27 24 chrX 58023236 58024599 -108625697 - RodERV21-int LTR ERV1 -2273 2718 1351 7 1027 837 117 0 0 chrX 58024751 58024879 -108625417 + (TA)n Simple_repeat Simple_repeat 2 129 0 7 1027 240 367 8 24 chrX 58025335 58025458 -108624838 - MIRb SINE MIR -29 239 119 7 1027 320 312 38 99 chrX 58026378 58026641 -108623655 + L2c LINE L2 3137 3383 -4 7 1027 233 328 0 0 chrX 58027750 58027811 -108622485 - ID2 SINE ID -2 81 21 7 1027 632 243 49 55 chrX 58027871 58027973 -108622323 - RMER30 DNA MER1_type -20 182 82 7 1027 405 58 0 0 chrX 58027973 58028025 -108622271 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 1027 632 243 49 55 chrX 58028025 58028105 -108622191 - RMER30 DNA MER1_type -121 81 1 7 1027 369 279 0 0 chrX 58028417 58028496 -108621800 + ID4 SINE ID 2 80 -3 7 1027 263 137 73 24 chrX 58028502 58028667 -108621629 + (TA)n Simple_repeat Simple_repeat 1 173 0 7 1027 1344 291 49 16 chrX 58028864 58029231 -108621065 - MTE2b LTR MaLR 0 379 1 8 1027 2453 143 8 10 chrX 58029431 58029826 -108620470 - ORR1B1 LTR MaLR 0 394 1 8 1027 227 311 88 103 chrX 58030026 58030162 -108620134 - MTB_Mm LTR MaLR -80 327 194 8 1027 21 57 0 0 chrX 58030437 58030472 -108619824 + AT_rich Low_complexity Low_complexity 1 35 0 8 1027 317 343 74 8 chrX 58031308 58031483 -108618813 + MIRm SINE MIR 1 203 -65 8 1027 807 247 13 0 chrX 58031654 58031804 -108618492 + RSINE1 SINE B4 6 157 -8 8 1027 600 239 110 0 chrX 58031934 58032097 -108618199 - B3A SINE B2 -15 183 3 8 1027 222 120 60 0 chrX 58032103 58032153 -108618143 + (TTTA)n Simple_repeat Simple_repeat 3 55 0 8 1027 559 196 125 0 chrX 58032155 58032267 -108618029 - ID_B1 SINE B4 -15 209 84 8 1027 299 231 0 30 chrX 58032304 58032371 -108617925 - MTE2a LTR MaLR -37 342 278 8 1027 272 296 30 30 chrX 58032612 58032713 -108617583 - MLT2B2 LTR ERVL -414 101 1 9 1027 243 250 161 54 chrX 58034721 58034814 -108615482 - MER117 DNA MER1_type -39 158 56 9 1027 1713 130 39 10 chrX 58034814 58035124 -108615172 + Lx5 LINE L1 6234 6552 -498 9 1027 203 228 0 34 chrX 58035291 58035350 -108614946 + (TTTG)n Simple_repeat Simple_repeat 2 58 0 9 1027 849 166 14 7 chrX 58035353 58035499 -108614797 - B1_Mur4 SINE Alu -2 148 2 9 1027 23 0 0 0 chrX 58035814 58035837 -108614459 + AT_rich Low_complexity Low_complexity 1 23 0 9 1027 3914 108 19 2 chrX 58035845 58036409 -108613887 + Lx2B LINE L1 6416 6989 -11 9 1027 3221 50 0 8 chrX 58036410 58036809 -108613487 - L1Md_F2 LINE L1 -4 6578 6183 9 1027 421 280 42 144 chrX 58036836 58037038 -108613258 + L1MB8 LINE L1 5759 5943 -235 9 1027 292 268 14 0 chrX 58037038 58037109 -108613187 - ID2 SINE ID -11 72 1 9 1027 421 280 42 144 chrX 58037109 58037300 -108612996 + L1MB8 LINE L1 5944 6124 -54 9 1027 1190 61 0 0 chrX 58037300 58037447 -108612849 - B1_Mus2 SINE Alu 0 147 1 1 1027 421 280 42 144 chrX 58037447 58037503 -108612793 + L1MB8 LINE L1 6125 6163 -15 9 1027 40 59 0 0 chrX 58037503 58037571 -108612725 + AT_rich Low_complexity Low_complexity 1 68 0 1 1027 208 98 19 56 chrX 58037750 58037804 -108612492 + A-rich Low_complexity Low_complexity 3 54 0 1 1027 520 246 69 0 chrX 58038098 58038228 -108612068 + ID_B1 SINE B4 86 224 0 1 1027 603 274 18 109 chrX 58038348 58038577 -108611719 + ID_B1 SINE B4 3 210 -14 1 1027 1060 124 6 6 chrX 58038578 58038757 -108611539 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 1027 426 39 0 0 chrX 58038758 58038810 -108611486 + (GGAA)n Simple_repeat Simple_repeat 3 54 0 1 1027 583 96 105 73 chrX 58038852 58038976 -108611320 - B1_Mur3 SINE Alu -1 148 21 1 1027 211 264 55 36 chrX 58039025 58039080 -108611216 + RSINE1 SINE B4 12 67 -98 1 1027 563 322 111 0 chrX 58039424 58039632 -108610664 + MLT1E3 LTR MaLR 392 622 -2 1 1027 688 344 7 70 chrX 58039807 58040107 -108610189 - B4A SINE B4 -2 290 10 1 1027 537 16 0 0 chrX 58040215 58040277 -108610019 + (TC)n Simple_repeat Simple_repeat 2 63 0 1 1027 357 75 0 0 chrX 58040277 58040329 -108609967 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1027 593 294 0 0 chrX 58040331 58040457 -108609839 - RSINE1 SINE B4 -37 128 3 1 1027 401 310 0 0 chrX 58040743 58040872 -108609424 - L2 LINE L2 -1035 2384 2256 1 1027 958 280 30 30 chrX 58041000 58041295 -108609001 + MLT1A0 LTR MaLR 71 365 0 1 1027 304 41 0 58 chrX 58041338 58041378 -108608918 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1027 1200 111 0 0 chrX 58041378 58041558 -108608738 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 1027 304 41 0 58 chrX 58041558 58041569 -108608727 + (GAAAA)n Simple_repeat Simple_repeat 1 10 0 1 1027 206 286 0 0 chrX 58042021 58042070 -108608226 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1027 291 85 0 0 chrX 58042577 58042624 -108607672 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 1 1027 209 167 48 0 chrX 58043029 58043071 -108607225 + GA-rich Low_complexity Low_complexity 4 47 0 1 1027 267 264 11 32 chrX 58043071 58043165 -108607131 + MER45R DNA Tip100 1290 1381 -200 1 1027 287 185 0 18 chrX 58043246 58043301 -108606995 - ID_B1 SINE B4 -89 135 82 1 1027 316 248 54 18 chrX 58043458 58043569 -108606727 - PB1D10 SINE Alu -1 116 2 1 1027 860 193 7 0 chrX 58043668 58043813 -108606483 + B1_Mur2 SINE Alu 4 149 0 1 1027 789 203 0 15 chrX 58044391 58044526 -108605770 - B1_Mur1 SINE Alu -7 142 10 1 1027 230 240 0 0 chrX 58044566 58044616 -108605680 - Lx LINE L1 -1581 5892 5843 1 1027 652 232 125 47 chrX 58044603 58044736 -108605560 - Lx LINE L1 -941 5713 5540 1 1027 3212 103 0 90 chrX 58044736 58045270 -108605026 - Lx2 LINE L1 -1 6996 6511 1 1027 652 238 76 104 chrX 58045270 58045404 -108604892 - Lx LINE L1 -308 5539 5421 1 1027 360 0 0 0 chrX 58045738 58045778 -108604518 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 1 1027 1128 101 0 0 chrX 58045779 58045937 -108604359 - B2_Mm2 SINE B2 -37 158 1 1 1027 704 284 43 9 chrX 58045960 58046167 -108604129 - B3A SINE B2 -8 208 1 1 1027 367 241 13 10 chrX 58046661 58046757 -108603539 - MTEb LTR MaLR 0 379 282 1 1027 323 330 9 0 chrX 58046859 58046971 -108603325 + GA-rich Low_complexity Low_complexity 2 114 0 1 1027 401 274 0 54 chrX 58047201 58047313 -108602983 - B4A SINE B4 -184 108 3 1 1027 477 266 55 45 chrX 58047348 58047549 -108602747 - MIRb SINE MIR -36 232 30 1 1027 325 311 57 89 chrX 58047563 58047609 -108602687 - MIRb SINE MIR -1 267 227 1 1027 1305 163 208 26 chrX 58047609 58047780 -108602516 + RMER17C LTR ERVK 1 221 -189 1 1027 387 0 0 0 chrX 58047780 58047823 -108602473 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1027 480 89 0 0 chrX 58047823 58047901 -108602395 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 1027 1305 163 208 26 chrX 58047901 58048075 -108602221 + RMER17C LTR ERVK 222 409 -1 1 1027 325 311 57 89 chrX 58048075 58048275 -108602021 - MIRb SINE MIR -42 226 29 1 1027 220 215 49 16 chrX 58048446 58048569 -108601727 + (TATAA)n Simple_repeat Simple_repeat 5 131 0 1 1027 217 170 44 33 chrX 58048510 58048601 -108601695 + (TA)n Simple_repeat Simple_repeat 2 93 0 1 1027 25 0 0 0 chrX 58048605 58048630 -108601666 + AT_rich Low_complexity Low_complexity 1 25 0 1 1027 382 314 71 7 chrX 58048652 58048712 -108601584 + ID SINE ID 21 89 -135 1 1027 312 267 118 10 chrX 58048712 58048814 -108601482 + PB1D10 SINE Alu 1 113 -4 1 1027 445 32 32 0 chrX 58049533 58049596 -108600700 + (TC)n Simple_repeat Simple_repeat 1 65 0 1 1027 373 300 0 8 chrX 58049744 58049865 -108600431 + PB1D7 SINE Alu 1 120 0 1 1027 545 288 139 45 chrX 58050218 58050505 -108599791 - Charlie2b DNA MER1_type -1844 938 625 1 1027 207 0 0 0 chrX 58050830 58050853 -108599443 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 1027 390 21 0 0 chrX 58050853 58050899 -108599397 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 1027 457 343 43 7 chrX 58050903 58051044 -108599252 - RSINE1 SINE B4 -14 151 6 1 1027 590 295 7 7 chrX 58051176 58051316 -108598980 - B1F SINE Alu -9 140 1 1 1027 180 418 0 12 chrX 58051356 58051436 -108598860 - MIRb SINE MIR -189 79 1 1 1027 22 0 0 0 chrX 58052463 58052485 -108597811 + AT_rich Low_complexity Low_complexity 1 22 0 1 1027 476 273 58 52 chrX 58053235 58053409 -108596887 + MER97c DNA MER1_type? 8 182 -908 1 1027 218 191 24 0 chrX 58054019 58054061 -108596235 + GA-rich Low_complexity Low_complexity 4 46 0 1 1027 420 319 19 115 chrX 58055115 58055271 -108595025 - B4A SINE B4 -150 142 2 1 1027 429 278 86 0 chrX 58055500 58055662 -108594634 - MER2 DNA MER2_type -54 291 116 1 1027 1209 48 0 0 chrX 58055667 58055814 -108594482 + B1_Mus2 SINE Alu 1 147 0 1 1027 470 71 29 0 chrX 58055814 58055884 -108594412 + (GAAAA)n Simple_repeat Simple_repeat 2 73 0 1 1027 520 292 23 15 chrX 58056318 58056450 -108593846 + ID_B1 SINE B4 91 223 -1 1 1027 339 301 26 26 chrX 58056463 58056579 -108593717 + MIR3 SINE MIR 42 157 -51 1 1027 1121 277 118 18 chrX 58056946 58057284 -108593012 + MTEa LTR MaLR 1 372 -7 1 1027 694 252 15 15 chrX 58057599 58057804 -108592492 + L1ME3 LINE L1 4382 4586 -1560 1 1027 252 210 62 138 chrX 58058027 58058237 -108592059 + Lx7 LINE L1 7487 7680 -16 1 1027 710 143 160 0 chrX 58058247 58058366 -108591930 + B1_Mus1 SINE Alu 1 138 -10 1 1027 358 354 162 10 chrX 58058784 58059098 -108591198 + L1ME3 LINE L1 4902 5263 -883 1 1027 514 289 125 23 chrX 58059152 58059559 -108590737 + L1ME3 LINE L1 5301 5747 -597 1 1027 1486 296 11 0 chrX 58059563 58059938 -108590358 + MTE2b LTR MaLR 1 379 0 1 1027 3253 288 80 44 chrX 58059943 58061323 -108588973 + MTE2b-int LTR MaLR 5 1580 0 1 1027 1064 284 42 109 chrX 58061332 58061691 -108588605 + MTE2b LTR MaLR 32 366 -13 1 1027 409 0 35 18 chrX 58061853 58061910 -108588386 + (TTTTG)n Simple_repeat Simple_repeat 3 60 0 1 1027 597 239 54 0 chrX 58061910 58062040 -108588256 - B1_Mur2 SINE Alu -12 137 1 1 1027 928 157 233 0 chrX 58062068 58062240 -108588056 - B3 SINE B2 -4 212 1 1 1027 363 272 112 27 chrX 58062241 58062464 -108587832 + L1ME3 LINE L1 5918 6159 -3 1 1027 342 281 0 35 chrX 58062486 58062571 -108587725 - PB1D7 SINE Alu -38 82 1 1 1027 475 313 95 57 chrX 58063533 58063743 -108586553 + B4A SINE B4 1 218 -74 1 1027 861 180 0 0 chrX 58063830 58063997 -108586299 + GA-rich Low_complexity Low_complexity 1 167 0 1 1027 272 309 203 39 chrX 58064071 58064085 -108586211 - RSINE1 SINE B4 -2 163 150 1 1027 1036 43 14 0 chrX 58064085 58064223 -108586073 + (TC)n Simple_repeat Simple_repeat 2 141 0 1 1027 183 80 0 0 chrX 58064223 58064247 -108586049 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1027 272 309 203 39 chrX 58064247 58064359 -108585937 - RSINE1 SINE B4 -16 149 16 1 1027 286 267 27 0 chrX 58064397 58064472 -108585824 - ID4 SINE ID -2 81 5 1 1028 1075 160 0 0 chrX 58065275 58065425 -108584871 - B1_Mur4 SINE Alu 0 150 1 1 1028 588 294 27 7 chrX 58065463 58065610 -108584686 + RSINE1 SINE B4 3 152 -13 1 1028 396 0 0 0 chrX 58065614 58065658 -108584638 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1028 23 54 0 0 chrX 58065664 58065701 -108584595 + AT_rich Low_complexity Low_complexity 1 37 0 1 1028 292 340 57 19 chrX 58066012 58066117 -108584179 + MIR SINE MIR 9 117 -145 1 1028 784 245 45 0 chrX 58066323 58066478 -108583818 - RSINE1 SINE B4 -1 164 3 1 1028 763 279 73 10 chrX 58066482 58066688 -108583608 - ID_B1 SINE B4 -1 223 5 1 1028 929 162 7 33 chrX 58066796 58066949 -108583347 - B1_Mur3 SINE Alu 0 149 1 1 1028 1659 175 66 74 chrX 58066984 58067361 -108582935 - ORR1D1 LTR MaLR 0 374 1 1 1028 824 171 116 0 chrX 58067397 58067578 -108582718 + Lx9 LINE L1 7375 7576 -68 1 1028 616 180 187 8 chrX 58068026 58068149 -108582147 - B1_Mus1 SINE Alu -2 146 2 1 1028 500 279 79 22 chrX 58068511 58068650 -108581646 + B3A SINE B2 55 201 -15 1 1028 1804 161 132 9 chrX 58070027 58070354 -108579942 + ORR1B2 LTR MaLR 1 367 0 1 1028 783 294 57 54 chrX 58070540 58070856 -108579440 - MLT2B4 LTR ERVL -239 317 1 1 1028 323 292 128 90 chrX 58070956 58071144 -108579152 + LTR50 LTR ERVL 19 213 -582 1 1028 343 237 114 44 chrX 58071381 58071472 -108578824 - MTD LTR MaLR -320 99 12 1 1028 224 128 25 25 chrX 58072385 58072465 -108577831 + A-rich Low_complexity Low_complexity 6 85 0 1 1028 381 271 16 78 chrX 58072589 58072717 -108577579 - MTE2a LTR MaLR -4 375 256 1 1028 617 288 0 0 chrX 58072851 58072983 -108577313 + ID_B1 SINE B4 86 217 -7 1 1028 462 79 0 0 chrX 58073864 58073927 -108576369 + (TCCC)n Simple_repeat Simple_repeat 4 66 0 1 1028 309 277 160 2 chrX 58073939 58074037 -108576259 - B1F1 SINE Alu -35 114 5 1 1028 219 356 92 8 chrX 58074157 58074287 -108576009 - L2 LINE L2 -2803 616 476 1 1028 679 246 35 7 chrX 58074874 58075017 -108575279 + B1_Mur2 SINE Alu 2 148 -1 1 1028 414 134 0 0 chrX 58075054 58075121 -108575175 + (GGA)n Simple_repeat Simple_repeat 3 69 0 2 1028 292 59 0 38 chrX 58075327 58075380 -108574916 + (TTTG)n Simple_repeat Simple_repeat 1 51 0 2 1028 942 132 7 46 chrX 58075391 58075542 -108574754 - B1_Mus1 SINE Alu -1 147 3 2 1028 941 236 0 37 chrX 58075546 58075735 -108574561 - B3A SINE B2 -16 182 1 2 1028 323 293 10 10 chrX 58075805 58075905 -108574391 - L1MA6 LINE L1 -199 6101 6002 2 1028 317 303 138 48 chrX 58075920 58076135 -108574161 - MIRb SINE MIR -30 238 7 2 1028 579 316 22 92 chrX 58076219 58076474 -108573822 - MLT1B LTR MaLR 0 390 155 2 1028 1603 267 67 65 chrX 58076474 58077026 -108573270 - MLT2B3 LTR ERVL 0 554 2 2 1028 391 282 127 16 chrX 58077034 58077160 -108573136 - MLT1B LTR MaLR -248 142 3 2 1028 245 182 18 0 chrX 58077166 58077221 -108573075 + CT-rich Low_complexity Low_complexity 1 56 0 2 1028 187 357 0 28 chrX 58077232 58077304 -108572992 - MIRb SINE MIR -164 104 35 2 1028 328 364 58 11 chrX 58077487 58077676 -108572620 - MIRc SINE MIR -36 232 35 2 1028 225 178 0 0 chrX 58078165 58078210 -108572086 + (TTGG)n Simple_repeat Simple_repeat 4 48 0 2 1028 255 357 129 7 chrX 58079734 58079889 -108570407 + Charlie10a DNA MER1_type 13 186 -94 2 1028 251 291 171 26 chrX 58080224 58080376 -108569920 + LTR50 LTR ERVL 17 190 -605 2 1028 520 341 40 40 chrX 58080463 58080780 -108569516 + LTR33A_ LTR ERVL 190 524 -7 2 1028 418 257 45 9 chrX 58080793 58080903 -108569393 + MIR SINE MIR 149 262 0 2 1028 199 224 143 0 chrX 58080920 58080969 -108569327 - MIR SINE MIR -6 256 201 2 1028 215 200 0 35 chrX 58081139 58081196 -108569100 + A-rich Low_complexity Low_complexity 3 57 0 2 1028 290 283 55 62 chrX 58081360 58081488 -108568808 + RMER15 LTR ERVL 1 127 -448 2 1028 467 257 310 13 chrX 58081550 58081779 -108568517 + RMER15 LTR ERVL 279 575 0 2 1028 290 319 46 46 chrX 58081798 58081995 -108568301 + MIR SINE MIR 44 240 -22 2 1028 596 282 91 91 chrX 58082106 58082457 -108567839 + ORR1E LTR MaLR 1 351 -8 2 1028 1916 199 26 33 chrX 58082527 58082832 -108567464 + Lx4B LINE L1 6638 6938 -120 2 1028 195 42 0 0 chrX 58082832 58082856 -108567440 + (GGTTG)n Simple_repeat Simple_repeat 4 27 0 2 1028 1916 199 26 33 chrX 58082856 58082970 -108567326 + Lx4B LINE L1 6939 7053 -5 2 1028 281 299 83 25 chrX 58083693 58083813 -108566483 + MIRb SINE MIR 62 188 -80 2 1028 204 305 93 64 chrX 58084055 58084195 -108566101 + MIRb SINE MIR 102 245 -23 2 1028 186 227 0 0 chrX 58084216 58084260 -108566036 + (CAT)n Simple_repeat Simple_repeat 2 45 0 2 1028 22 0 0 0 chrX 58084754 58084776 -108565520 + GC_rich Low_complexity Low_complexity 1 22 0 2 1028 180 308 10 99 chrX 58085193 58085294 -108565002 + L2 LINE L2 496 587 -2832 2 1028 281 50 49 16 chrX 58085937 58085998 -108564298 + (TTTTTG)n Simple_repeat Simple_repeat 2 64 0 2 1028 210 222 208 0 chrX 58086950 58087022 -108563274 + MIRb SINE MIR 167 253 -15 2 1028 232 167 0 0 chrX 58087077 58087113 -108563183 + MIRc SINE MIR 124 159 -109 2 1028 300 276 26 0 chrX 58087131 58087207 -108563089 + MIR SINE MIR 1 78 -184 2 1028 385 294 15 61 chrX 58087303 58087499 -108562797 - Charlie4a DNA MER1_type -279 229 43 2 1028 710 69 99 0 chrX 58087520 58087621 -108562675 + B2_Mm2 SINE B2 1 111 -84 2 1028 437 71 0 14 chrX 58087621 58087692 -108562604 + (TA)n Simple_repeat Simple_repeat 2 71 0 2 1028 29 0 0 0 chrX 58087754 58087783 -108562513 + AT_rich Low_complexity Low_complexity 1 29 0 2 1028 864 206 0 14 chrX 58087793 58087936 -108562360 + B1_Mur4 SINE Alu 2 142 -8 2 1028 404 284 25 49 chrX 58088110 58088232 -108562064 - MER58A DNA MER1_type -105 119 1 2 1028 846 211 0 7 chrX 58088280 58088428 -108561868 - B1_Mur2 SINE Alu -1 148 2 2 1028 1165 266 20 94 chrX 58089273 58089702 -108560594 + MTE2a LTR MaLR 1 405 -14 2 1028 715 267 79 37 chrX 58089955 58090169 -108560127 + ID_B1 SINE B4 2 224 0 2 1028 291 169 0 0 chrX 58090523 58090594 -108559702 + GA-rich Low_complexity Low_complexity 1 71 0 2 1028 972 143 33 44 chrX 58091242 58091425 -108558871 - B2_Mm2 SINE B2 -14 181 1 2 1028 204 350 13 101 chrX 58091638 58091797 -108558499 + L2b LINE L2 2935 3079 -340 2 1028 3350 61 10 5 chrX 58091941 58092335 -108557961 + MTA_Mm LTR MaLR 1 396 0 2 1028 314 281 0 0 chrX 58092862 58092926 -108557370 - ID4_ SINE ID -17 66 3 2 1028 302 315 11 53 chrX 58092933 58093027 -108557269 + L2b LINE L2 3286 3375 0 2 1028 392 228 109 82 chrX 58093238 58093348 -108556948 + B1F SINE Alu 1 113 -36 2 1028 414 0 0 0 chrX 58093369 58093415 -108556881 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1028 315 0 0 0 chrX 58093472 58093507 -108556789 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1028 256 277 0 78 chrX 58093566 58093656 -108556640 - MIRb SINE MIR 0 268 186 2 1028 199 385 23 15 chrX 58095339 58095471 -108554825 + MIRb SINE MIR 20 152 -116 2 1028 544 208 118 2 chrX 58095559 58095701 -108554595 - ID_B1 SINE B4 0 224 72 2 1028 205 191 0 0 chrX 58096007 58096049 -108554247 + A-rich Low_complexity Low_complexity 1 42 0 2 1028 584 138 0 0 chrX 58096056 58096150 -108554146 + URR1B DNA MER1_type 132 225 0 2 1028 292 280 140 0 chrX 58096288 58096388 -108553908 - RMER30 DNA MER1_type -73 129 16 2 1028 234 62 0 0 chrX 58096532 58096564 -108553732 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 2 1028 213 39 0 0 chrX 58096737 58096763 -108553533 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 2 1028 288 0 0 0 chrX 58097487 58097519 -108552777 + (TA)n Simple_repeat Simple_repeat 1 32 0 2 1028 393 308 22 0 chrX 58097668 58097759 -108552537 + B4A SINE B4 5 97 -195 2 1028 1543 182 32 41 chrX 58097755 58098071 -108552225 + ORR1D1 LTR MaLR 5 317 -57 2 1028 792 232 99 10 chrX 58098118 58098310 -108551986 - B3 SINE B2 -2 214 6 2 1028 236 114 0 0 chrX 58098312 58098347 -108551949 + PB1D9 SINE Alu 80 114 -6 2 1028 1155 354 51 30 chrX 58098790 58099398 -108550898 - L1M4b LINE L1 -6713 621 1 2 1028 707 241 107 30 chrX 58100090 58100287 -108550009 + ID_B1 SINE B4 5 216 -8 2 1028 499 260 100 121 chrX 58101864 58101977 -108548319 - Tigger7 DNA MER2_type -42 2449 2341 2 1028 893 211 54 25 chrX 58101977 58102181 -108548115 + B3 SINE B2 1 210 -6 2 1028 499 260 100 121 chrX 58102181 58102316 -108547980 - Tigger7 DNA MER2_type -151 2340 2206 2 1028 520 323 68 0 chrX 58102323 58102484 -108547812 + Tigger7 DNA MER2_type 69 240 -2251 2 1028 302 325 50 0 chrX 58102593 58102713 -108547583 + Cheshire DNA MER1_type 158 283 -2137 2 1028 21 0 0 0 chrX 58102720 58102741 -108547555 + AT_rich Low_complexity Low_complexity 1 21 0 2 1028 317 307 29 38 chrX 58102755 58102860 -108547436 + B3 SINE B2 9 112 -104 2 1028 501 47 0 0 chrX 58102877 58102941 -108547355 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 1028 22 0 0 0 chrX 58102952 58102974 -108547322 + AT_rich Low_complexity Low_complexity 1 22 0 2 1028 639 310 32 0 chrX 58103173 58103328 -108546968 + RSINE1 SINE B4 4 163 -2 2 1028 24 0 0 0 chrX 58103343 58103367 -108546929 + AT_rich Low_complexity Low_complexity 1 24 0 2 1028 816 298 105 20 chrX 58103806 58104159 -108546137 + L2 LINE L2 2697 3079 -340 2 1028 642 299 11 0 chrX 58104215 58104389 -108545907 - ID_B1 SINE B4 -45 179 4 2 1028 335 341 75 42 chrX 58104637 58104851 -108545445 - LTR75_1 LTR ERV1 -102 444 224 2 1028 408 298 77 60 chrX 58105228 58105410 -108544886 + MIRb SINE MIR 23 207 -61 2 1028 280 203 14 14 chrX 58105555 58105625 -108544671 + Lx8 LINE L1 7387 7456 -17 2 1028 513 0 0 0 chrX 58105697 58105754 -108544542 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 1028 931 172 172 0 chrX 58107150 58107342 -108542954 - URR1B DNA MER1_type 0 225 1 2 1028 1394 98 51 97 chrX 58108048 58108099 -108542197 + URR1A DNA MER1_type 1 41 -185 2 1028 1240 73 6 6 chrX 58108099 58108277 -108542019 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 2 1028 1244 74 0 7 chrX 58108287 58108436 -108541860 - B1_Mus1 SINE Alu 0 148 1 2 1028 1394 98 51 97 chrX 58108436 58108610 -108541686 + URR1A DNA MER1_type 42 226 0 2 1028 21 36 0 0 chrX 58108730 58108758 -108541538 + AT_rich Low_complexity Low_complexity 1 28 0 2 1028 284 360 44 98 chrX 58108777 58108879 -108541417 + B4 SINE B4 1 213 -79 2 1028 666 228 16 0 chrX 58108879 58109002 -108541294 + B1_Mur2 SINE Alu 12 136 -13 2 1028 234 0 0 0 chrX 58109002 58109028 -108541268 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 2 1028 1468 337 75 99 chrX 58109192 58109423 -108540873 - MTE-int LTR MaLR -390 1190 937 2 1028 1730 174 84 140 chrX 58109423 58109634 -108540662 - MTD LTR MaLR -2 417 205 2 1028 924 107 31 0 chrX 58109634 58109793 -108540503 + (TTTCC)n Simple_repeat Simple_repeat 2 165 0 2 1028 1730 174 84 140 chrX 58109793 58109831 -108540465 - MTD LTR MaLR -215 204 204 2 1028 930 145 7 33 chrX 58109831 58109981 -108540315 - B1_Mur3 SINE Alu -2 147 2 2 1028 1730 174 84 140 chrX 58109981 58110172 -108540124 - MTD LTR MaLR -215 204 1 2 1028 1468 337 75 99 chrX 58110172 58111110 -108539186 - MTE-int LTR MaLR -644 936 49 2 1028 744 199 45 16 chrX 58111219 58111397 -108538899 - B3 SINE B2 0 193 1 2 1028 270 300 50 132 chrX 58111405 58111647 -108538649 - ORR1E LTR MaLR -42 317 96 2 1028 298 262 58 10 chrX 58111712 58111816 -108538480 - MLT2B2 LTR ERVL -406 109 1 2 1028 1245 206 145 36 chrX 58112478 58112966 -108537330 - RMER4B LTR ERVK 0 611 1 2 1028 1517 62 5 0 chrX 58113306 58113498 -108536798 - B2_Mm1t SINE B2 0 193 1 2 1028 190 239 94 42 chrX 58113550 58113646 -108536650 - MIR SINE MIR -115 147 47 2 1028 378 0 0 0 chrX 58113804 58113846 -108536450 + (TTAG)n Simple_repeat Simple_repeat 3 44 0 2 1028 310 254 0 0 chrX 58113893 58113956 -108536340 - ID2 SINE ID -10 73 11 2 1028 447 303 55 0 chrX 58114043 58114151 -108536145 + PB1 SINE Alu 1 114 -13 3 1028 1315 229 27 27 chrX 58114151 58114452 -108535844 - MTD LTR MaLR 0 419 119 3 1028 462 161 21 41 chrX 58115128 58115225 -108535071 + B3A SINE B2 1 95 -103 3 1028 450 0 0 0 chrX 58115225 58115275 -108535021 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1028 189 0 0 0 chrX 58115275 58115295 -108535001 + (GA)n Simple_repeat Simple_repeat 2 22 0 3 1028 222 118 0 0 chrX 58115694 58115728 -108534568 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1028 275 345 84 12 chrX 58116372 58116539 -108533757 + MLT1J LTR MaLR 3 181 -331 3 1028 762 277 42 46 chrX 58117516 58117732 -108532564 + B4A SINE B4 1 215 -77 3 1028 3032 63 42 0 chrX 58117754 58118137 -108532159 + MTB LTR MaLR 1 399 -1 3 1028 3802 286 68 27 chrX 58118445 58119846 -108530450 - Lx8 LINE L1 -456 7017 5587 3 1028 332 325 167 42 chrX 58119832 58120192 -108530104 + Lx8 LINE L1 7063 7467 -6 3 1028 579 277 66 108 chrX 58120182 58120361 -108529935 + L1M5 LINE L1 3471 3654 -2492 3 1028 1323 276 38 45 chrX 58120361 58120831 -108529465 - MLT1C LTR MaLR 0 467 1 3 1028 579 260 67 155 chrX 58120831 58121232 -108529064 + L1M5 LINE L1 3655 4011 -2135 3 1028 971 237 5 31 chrX 58121232 58121454 -108528842 + B3 SINE B2 1 216 0 3 1028 569 260 67 155 chrX 58121454 58121535 -108528761 + L1M5 LINE L1 4012 4075 -2071 3 1028 264 273 130 0 chrX 58122152 58122229 -108528067 + ID SINE ID 2 88 -136 3 1028 464 191 75 53 chrX 58122319 58122452 -108527844 - MLT1C LTR MaLR -297 170 35 3 1028 1250 27 7 0 chrX 58122630 58122776 -108527520 + B1_Mm SINE Alu 1 147 0 3 1028 333 280 37 0 chrX 58122891 58122998 -108527298 + L1MDa LINE L1 2356 2466 -4167 3 1028 3340 92 45 0 chrX 58123053 58123611 -108526685 + Lx3B LINE L1 5388 5966 -1007 3 1028 1031 147 28 28 chrX 58123921 58124103 -108526193 + B2_Mm1t SINE B2 2 183 -10 3 1028 1383 106 16 0 chrX 58124105 58124294 -108526002 + B2_Mm2 SINE B2 1 192 -3 3 1028 261 57 0 0 chrX 58124413 58124448 -108525848 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1028 180 194 0 0 chrX 58124561 58124592 -108525704 + L3 LINE CR1 3846 3876 -613 3 1028 677 188 7 34 chrX 58124798 58124947 -108525349 + B1_Mus2 SINE Alu 3 147 0 3 1028 216 200 0 0 chrX 58124957 58125012 -108525284 + GA-rich Low_complexity Low_complexity 3 57 0 3 1028 882 141 12 6 chrX 58125457 58125628 -108524668 + CT-rich Low_complexity Low_complexity 3 174 0 3 1028 315 0 0 0 chrX 58126131 58126166 -108524130 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1028 603 252 47 65 chrX 58126170 58126306 -108523990 - B3A SINE B2 -30 168 35 3 1028 3886 33 2 0 chrX 58126306 58126757 -108523539 - L1Md_F2 LINE L1 0 6582 6131 3 1028 603 252 47 65 chrX 58126757 58126790 -108523506 - B3A SINE B2 -164 34 2 3 1028 458 312 88 40 chrX 58127504 58127801 -108522495 + LTR52 LTR ERVL 12 322 -99 3 1028 246 32 0 0 chrX 58127808 58127839 -108522457 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1028 836 281 5 0 chrX 58127872 58128082 -108522214 - B3 SINE B2 -5 211 1 3 1028 245 228 49 37 chrX 58128117 58128199 -108522097 - MIR SINE MIR -99 163 81 3 1028 1614 34 5 5 chrX 58128656 58128862 -108521434 - L1Md_F2 LINE L1 0 6582 6377 3 1028 482 264 23 23 chrX 58128946 58129074 -108521222 - MIR SINE MIR -71 191 64 3 1028 377 311 9 0 chrX 58129200 58129306 -108520990 - ID_B1 SINE B4 -31 193 87 3 1028 254 309 57 74 chrX 58129350 58129525 -108520771 - MIRb SINE MIR -58 210 39 3 1028 251 259 48 36 chrX 58130120 58130204 -108520092 + B4 SINE B4 1 85 -207 3 1028 647 176 15 0 chrX 58130204 58130236 -108520060 + polypurine Low_complexity Low_complexity 1 32 0 3 1028 1234 68 17 0 chrX 58130236 58130413 -108519883 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1028 647 176 15 0 chrX 58130413 58130516 -108519780 + polypurine Low_complexity Low_complexity 33 137 0 3 1028 620 286 38 38 chrX 58130517 58130728 -108519568 + B4 SINE B4 82 292 0 3 1028 369 102 0 0 chrX 58130734 58130793 -108519503 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 1028 523 229 98 0 chrX 58131203 58131325 -108518971 + B1F SINE Alu 1 134 -15 3 1028 207 179 0 0 chrX 58131346 58131385 -108518911 + GA-rich Low_complexity Low_complexity 2 40 0 3 1028 1038 56 0 14 chrX 58132015 58132159 -108518137 + B1_Mus1 SINE Alu 7 148 0 3 1028 833 29 10 0 chrX 58132537 58132641 -108517655 + (TTC)n Simple_repeat Simple_repeat 2 106 0 3 1028 1986 53 12 8 chrX 58132830 58133079 -108517217 - L1Md_A LINE L1 -1 6581 6332 3 1028 348 21 0 0 chrX 58133079 58133126 -108517170 - L1Md_A LINE L1 -36 6546 6500 3 1028 4793 66 16 5 chrX 58133130 58133738 -108516558 - L1Md_F2 LINE L1 -12 6570 5956 3 1028 901 291 176 72 chrX 58133880 58134368 -108515928 + MLT1F2 LTR MaLR 13 551 -9 3 1028 222 383 39 22 chrX 58135778 58135957 -108514339 + L2 LINE L2 2654 2835 -584 3 1028 229 377 0 0 chrX 58136595 58136672 -108513624 + ID4 SINE ID 5 81 -2 3 1028 24 32 0 0 chrX 58136674 58136705 -108513591 + AT_rich Low_complexity Low_complexity 1 31 0 3 1028 298 253 52 124 chrX 58137188 58137277 -108513019 - L1MB7 LINE L1 -190 5994 5917 3 1028 526 261 8 8 chrX 58137277 58137408 -108512888 + B1F SINE Alu 5 135 -14 3 1028 298 253 52 124 chrX 58137408 58137491 -108512805 - L1MB7 LINE L1 -268 5916 5835 3 1028 279 0 0 0 chrX 58137491 58137522 -108512774 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1028 298 253 52 124 chrX 58137522 58137542 -108512754 - L1MB7 LINE L1 -350 5834 5815 3 1028 274 240 41 172 chrX 58137544 58137702 -108512594 - L1MC3 LINE L1 0 7785 7655 3 1028 995 257 5 9 chrX 58137702 58137926 -108512370 - ID_B1 SINE B4 0 224 2 3 1028 274 240 41 172 chrX 58137926 58138034 -108512262 - L1MC3 LINE L1 -131 7654 7554 3 1028 262 67 0 62 chrX 58138052 58138100 -108512196 - B2_Mm2 SINE B2 -150 45 1 3 1028 340 212 75 0 chrX 58138109 58138189 -108512107 - L1MC3 LINE L1 -289 7496 7411 3 1028 589 168 69 0 chrX 58138205 58138306 -108511990 + B1_Mur2 SINE Alu 31 138 -11 3 1028 405 0 0 0 chrX 58138306 58138351 -108511945 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 3 1028 1442 60 33 0 chrX 58138372 58138554 -108511742 + B2_Mm2 SINE B2 2 189 -6 3 1028 1035 317 55 16 chrX 58138554 58139045 -108511251 - L1MC3 LINE L1 -394 7391 6882 3 1028 928 257 70 58 chrX 58139094 58139628 -108510668 - L1MB7 LINE L1 -397 5781 5223 3 1028 267 31 0 0 chrX 58139628 58139660 -108510636 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1028 603 240 31 98 chrX 58139660 58139732 -108510564 - L1MB7 LINE L1 -924 5222 5162 3 1028 207 0 0 0 chrX 58139732 58139755 -108510541 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1028 603 240 31 98 chrX 58139755 58139799 -108510497 - L1MB7 LINE L1 -985 5161 5128 3 1028 312 216 13 13 chrX 58139821 58139896 -108510400 - RSINE1 SINE B4 0 165 91 3 1028 369 245 53 0 chrX 58139877 58139971 -108510325 - PB1D10 SINE Alu -6 111 13 3 1028 215 208 36 72 chrX 58140103 58140186 -108510110 - L2b LINE L2 -75 3351 3272 3 1028 1501 164 87 3 chrX 58140198 58140510 -108509786 + ORR1A1 LTR MaLR 1 338 -8 3 1028 378 0 0 0 chrX 58140511 58140553 -108509743 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1028 302 263 65 73 chrX 58140626 58140749 -108509547 - L2b LINE L2 -219 3156 3035 3 1028 331 108 0 39 chrX 58145501 58145578 -108504718 + (CGG)n Simple_repeat Simple_repeat 2 75 0 3 1028 204 40 0 0 chrX 58145603 58145628 -108504668 + (CGG)n Simple_repeat Simple_repeat 2 26 0 3 1028 300 70 0 0 chrX 58145849 58145892 -108504404 + (CGG)n Simple_repeat Simple_repeat 2 44 0 3 1028 288 254 0 0 chrX 58146185 58146248 -108504048 + (CCG)n Simple_repeat Simple_repeat 2 64 0 3 1028 279 0 0 0 chrX 58148088 58148119 -108502177 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1028 540 0 0 0 chrX 58148119 58148178 -108502118 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 1028 351 78 0 0 chrX 58150466 58150517 -108499779 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1028 185 359 66 0 chrX 58154983 58155089 -108495207 - L2a LINE L2 -20 3406 3294 3 1028 193 287 170 0 chrX 58155137 58155231 -108495065 - L2a LINE L2 -204 3222 3113 3 1028 200 122 0 24 chrX 58155236 58155278 -108495018 + (CAT)n Simple_repeat Simple_repeat 3 43 0 3 1028 631 329 39 23 chrX 58155758 58155991 -108494305 - ID_B1 SINE B4 -47 245 6 3 1028 1104 193 133 18 chrX 58156007 58156338 -108493958 - RMER15 LTR ERVL -105 470 64 3 1028 21 36 0 0 chrX 58156919 58156947 -108493349 + AT_rich Low_complexity Low_complexity 1 28 0 3 1028 1309 122 128 8 chrX 58157548 58157797 -108492499 + L1_Mus4 LINE L1 6355 6633 -3 3 1028 396 0 0 0 chrX 58157800 58157844 -108492452 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1028 222 37 0 0 chrX 58158087 58158114 -108492182 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 3 1028 1212 55 0 0 chrX 58158114 58158259 -108492037 - B1_Mus1 SINE Alu -2 146 2 3 1028 243 0 0 0 chrX 58158562 58158589 -108491707 + (TAA)n Simple_repeat Simple_repeat 3 29 0 3 1028 260 287 11 11 chrX 58158805 58158900 -108491396 - L1M4b LINE L1 -7153 181 87 3 1028 1670 26 0 20 chrX 58158983 58159182 -108491114 - B2_Mm2 SINE B2 0 195 1 3 1028 4904 28 3 5 chrX 58159193 58159770 -108490526 + L1Md_F2 LINE L1 5999 6574 -8 3 1028 709 286 75 16 chrX 58160843 58161095 -108489201 - B4A SINE B4 -21 271 5 3 1028 1085 278 64 14 chrX 58161161 58161585 -108488711 + L1M2 LINE L1 4552 4996 -1147 3 1028 1038 222 54 36 chrX 58161589 58161650 -108488646 + MTD LTR MaLR 137 197 -222 3 1028 482 0 0 17 chrX 58161650 58161709 -108488587 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 3 1028 1038 222 54 36 chrX 58161709 58161923 -108488373 + MTD LTR MaLR 198 417 -2 3 1028 356 298 100 56 chrX 58162214 58162463 -108487833 - L2a LINE L2 0 3426 3167 3 1028 182 189 0 0 chrX 58162612 58162649 -108487647 - L2a LINE L2 0 3426 3390 3 1028 203 254 27 40 chrX 58162704 58162778 -108487518 - MIRb SINE MIR -48 220 148 3 1028 298 271 65 16 chrX 58163297 58163421 -108486875 + CT-rich Low_complexity Low_complexity 2 131 0 3 1028 442 187 21 32 chrX 58163752 58163846 -108486450 - ID_B1 SINE B4 -25 199 107 3 1028 499 287 17 0 chrX 58164168 58164283 -108486013 - ID_B1 SINE B4 -105 119 3 3 1028 1643 47 0 0 chrX 58164604 58164797 -108485499 - B2_Mm1a SINE B2 0 193 1 3 1028 23 33 0 0 chrX 58167903 58167933 -108482363 + AT_rich Low_complexity Low_complexity 1 30 0 3 1028 235 271 44 97 chrX 58168847 58168954 -108481342 - PB1D10 SINE Alu -17 103 1 3 1028 394 301 0 19 chrX 58169462 58169567 -108480729 - PB1D10 SINE Alu 0 117 15 3 1028 209 130 43 0 chrX 58169667 58169713 -108480583 + (TCTCTG)n Simple_repeat Simple_repeat 4 51 0 4 1028 569 119 0 10 chrX 58169720 58169822 -108480474 + (TG)n Simple_repeat Simple_repeat 2 102 0 4 1028 393 294 113 27 chrX 58170152 58170337 -108479959 - MER3 DNA MER1_type -6 203 3 4 1028 936 51 0 0 chrX 58170477 58170595 -108479701 + (TCTCCC)n Simple_repeat Simple_repeat 3 120 0 4 1028 252 0 0 0 chrX 58170595 58170622 -108479674 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 1028 423 0 0 0 chrX 58170622 58170668 -108479628 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1028 243 281 0 15 chrX 58170832 58170897 -108479399 - BC1_Mm scRNA scRNA -88 64 1 4 1028 667 176 99 20 chrX 58172206 58172357 -108477939 + MIRb SINE MIR 60 222 -46 4 1028 246 325 66 33 chrX 58172743 58172864 -108477432 - MIRb SINE MIR -52 216 92 4 1028 880 274 14 0 chrX 58173029 58173237 -108477059 - ID_B1 SINE B4 -11 213 3 4 1028 180 0 0 0 chrX 58173274 58173294 -108477002 + (GGA)n Simple_repeat Simple_repeat 3 22 0 4 1028 450 302 43 30 chrX 58173370 58173534 -108476762 - MER5A1 DNA MER1_type 0 166 1 4 1028 376 296 50 117 chrX 58173537 58173717 -108476579 + B4 SINE B4 2 169 -123 4 1028 2317 155 88 5 chrX 58173755 58174188 -108476108 + RMER19B LTR ERVK 422 890 -12 4 1028 325 281 12 0 chrX 58174572 58174654 -108475642 + RSINE1 SINE B4 55 137 -28 4 1028 917 316 49 4 chrX 58174699 58174944 -108475352 + B4 SINE B4 36 291 -1 4 1028 1509 81 5 0 chrX 58175625 58175810 -108474486 - B2_Mm2 SINE B2 -8 187 2 4 1028 6433 227 64 34 chrX 58175810 58175943 -108474353 - Lx9 LINE L1 -9 7635 7517 4 1028 779 52 287 0 chrX 58175943 58176058 -108474238 - B1_Mus1 SINE Alu 0 148 1 4 1028 6433 227 64 34 chrX 58176058 58177712 -108472584 - Lx9 LINE L1 -128 7516 5793 4 1028 1237 68 0 0 chrX 58177885 58178031 -108472265 + B1_Mm SINE Alu 2 147 0 4 1028 206 81 27 0 chrX 58178044 58178081 -108472215 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 4 1028 415 289 17 9 chrX 58178145 58178260 -108472036 + ID_B1 SINE B4 109 224 0 4 1028 272 276 83 63 chrX 58178590 58178829 -108471467 - L1M3f LINE L1 -4925 2409 2293 4 1028 1566 151 20 64 chrX 58178836 58178901 -108471395 + MTC LTR MaLR 1 65 -356 4 1028 3359 39 0 3 chrX 58178901 58179287 -108471009 + L1Md_A LINE L1 6197 6581 -1 4 1028 1566 151 20 64 chrX 58179287 58179519 -108470777 + MTC LTR MaLR 66 285 -136 4 1028 501 138 11 0 chrX 58179519 58179609 -108470687 + B2_Mm1t SINE B2 99 188 -7 4 1028 602 212 55 21 chrX 58179655 58179845 -108470451 + ORR1C1 LTR MaLR 1 196 -198 4 1028 1195 202 15 45 chrX 58180149 58180259 -108470037 + ORR1C1 LTR MaLR 121 227 -151 4 1028 204 67 0 0 chrX 58180259 58180289 -108470007 + (GCTG)n Simple_repeat Simple_repeat 1 30 0 4 1028 1195 202 15 45 chrX 58180289 58180443 -108469853 + ORR1C1 LTR MaLR 228 377 -1 4 1028 683 281 33 0 chrX 58180640 58180793 -108469503 - RSINE1 SINE B4 0 165 8 4 1028 357 296 17 106 chrX 58180803 58180971 -108469325 - L1M3f LINE L1 -4577 2360 2217 4 1028 2123 167 27 39 chrX 58180971 58181377 -108468919 - Lx4B LINE L1 -7 7051 6651 4 1028 514 229 87 26 chrX 58181377 58181606 -108468690 - L1M3f LINE L1 -4133 1873 1631 4 1028 420 158 0 0 chrX 58181622 58181698 -108468598 + CT-rich Low_complexity Low_complexity 2 77 0 4 1028 346 235 194 0 chrX 58182406 58182504 -108467792 - B1F SINE Alu 0 149 33 4 1028 537 91 0 0 chrX 58182554 58182631 -108467665 + B1_Mur4 SINE Alu 73 149 -1 4 1028 201 121 0 0 chrX 58182632 58182665 -108467631 + (A)n Simple_repeat Simple_repeat 1 33 0 4 1028 256 354 0 50 chrX 58183984 58184085 -108466211 + MER81 DNA AcHobo 18 113 -1 4 1028 223 264 0 122 chrX 58184522 58184604 -108465692 - L2c LINE L2 -36 3351 3280 4 1028 582 246 3 11 chrX 58185292 58185414 -108464882 + B1_Mur1 SINE Alu 3 117 0 4 1028 1110 318 34 21 chrX 58185775 58186248 -108464048 + L1_Rod LINE L1 5369 5847 0 4 1028 641 284 114 46 chrX 58186708 58187033 -108463263 + RMER15 LTR ERVL 220 566 -9 4 1028 224 250 0 0 chrX 58187031 58187075 -108463221 + RSINE1 SINE B4 26 69 -96 4 1028 1175 42 0 0 chrX 58187259 58187402 -108462894 - B1_Mus1 SINE Alu 0 148 6 4 1028 2123 92 94 12 chrX 58187413 58187732 -108462564 - L1_Mus2 LINE L1 -2 6564 6220 4 1028 567 62 0 0 chrX 58187858 58187938 -108462358 + (GAAA)n Simple_repeat Simple_repeat 2 81 0 4 1028 734 302 28 28 chrX 58188476 58188694 -108461602 + ID_B1 SINE B4 4 221 -3 4 1028 699 286 69 173 chrX 58188833 58189038 -108461258 + MTD LTR MaLR 1 203 -216 4 1028 1270 54 0 0 chrX 58189038 58189185 -108461111 + B1_Mm SINE Alu 1 147 0 4 1028 699 287 73 157 chrX 58189185 58189415 -108460881 + MTD LTR MaLR 181 374 -33 4 1028 180 0 0 0 chrX 58189416 58189436 -108460860 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 1028 240 273 112 120 chrX 58190103 58190228 -108460068 - LTR90B LTR LTR -97 699 576 4 1028 300 111 0 0 chrX 58190293 58190338 -108459958 + (A)n Simple_repeat Simple_repeat 1 45 0 4 1028 287 267 13 0 chrX 58190450 58190525 -108459771 - MIRm SINE MIR 0 276 201 4 1028 279 292 103 9 chrX 58190525 58190557 -108459739 - L2a LINE L2 -2 3424 3308 4 1028 1026 251 22 73 chrX 58190913 58191188 -108459108 + B4A SINE B4 6 266 -26 4 1028 447 78 0 0 chrX 58191189 58191253 -108459043 + (CA)n Simple_repeat Simple_repeat 2 65 0 4 1028 332 284 19 10 chrX 58191428 58191531 -108458765 + MER45A DNA Tip100 74 177 -1 4 1028 324 0 0 0 chrX 58193896 58193932 -108456364 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1028 1019 293 28 11 chrX 58194278 58194564 -108455732 + B4A SINE B4 2 292 0 4 1028 207 0 0 0 chrX 58195011 58195034 -108455262 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 1028 530 252 99 26 chrX 58195039 58195190 -108455106 - RSINE1 SINE B4 -1 164 3 4 1029 194 271 21 0 chrX 58196086 58196134 -108454162 - MIRm SINE MIR -13 263 215 4 1029 802 308 36 0 chrX 58196444 58196639 -108453657 - ID_B1 SINE B4 -7 217 16 4 1029 3514 99 26 2 chrX 58196821 58197285 -108453011 + MT2C_Mm LTR ERVL 1 475 0 4 1029 321 93 0 0 chrX 58197599 58197653 -108452643 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 1029 332 288 27 0 chrX 58197663 58197774 -108452522 - L1MC5 LINE L1 -866 7095 6982 4 1029 233 268 0 0 chrX 58197937 58197993 -108452303 + ID_B1 SINE B4 121 176 -48 4 1029 290 273 112 38 chrX 58198316 58198476 -108451820 - L1MEf LINE L1 -4954 1246 1075 4 1029 2234 188 51 47 chrX 58198501 58199009 -108451287 + RMER15 LTR ERVL 1 510 -65 4 1029 240 176 26 51 chrX 58199050 58199128 -108451168 + A-rich Low_complexity Low_complexity 3 78 0 4 1029 378 148 0 0 chrX 58199146 58199207 -108451089 + B1_Mus2 SINE Alu 80 140 -7 4 1029 205 51 25 25 chrX 58199211 58199251 -108451045 + (CAA)n Simple_repeat Simple_repeat 1 40 0 4 1029 546 286 13 39 chrX 58199316 58199469 -108450827 - B1_Mur1 SINE Alu 0 149 1 4 1029 249 247 301 24 chrX 58199470 58199553 -108450743 - PB1D10 SINE Alu -11 106 1 4 1029 251 179 73 15 chrX 58199553 58199621 -108450675 - L1MEf LINE L1 -5183 1017 946 4 1029 815 268 0 12 chrX 58200043 58200209 -108450087 - RSINE1 SINE B4 0 165 2 4 1029 279 277 176 24 chrX 58200300 58200385 -108449911 - RSINE1 SINE B4 -1 164 67 4 1029 714 105 0 62 chrX 58200441 58200553 -108449743 - B1_Mur2 SINE Alu -17 132 28 4 1029 367 308 0 0 chrX 58200676 58200767 -108449529 - B1F SINE Alu -8 141 51 4 1029 1262 68 0 0 chrX 58201206 58201353 -108448943 + B1_Mus2 SINE Alu 1 147 0 4 1029 22 0 0 0 chrX 58201368 58201390 -108448906 + AT_rich Low_complexity Low_complexity 1 22 0 4 1029 1255 91 79 6 chrX 58201395 58201572 -108448724 + B2_Mm2 SINE B2 1 190 -5 4 1029 789 283 126 35 chrX 58201574 58202065 -108448231 - L1MB3 LINE L1 -358 5825 5290 4 1029 1222 88 0 0 chrX 58202065 58202212 -108448084 - B1_Mus2 SINE Alu 0 147 1 4 1029 265 251 162 84 chrX 58202212 58202425 -108447871 - L1M4 LINE L1 -844 5302 5063 4 1029 1369 161 36 5 chrX 58202426 58202645 -108447651 + URR1A DNA MER1_type 1 226 0 4 1029 654 164 0 8 chrX 58202680 58202797 -108447499 + B1_Mur4 SINE Alu 33 148 -2 4 1029 1149 68 14 7 chrX 58202907 58203054 -108447242 - B1_Mus1 SINE Alu 0 148 1 4 1029 754 163 6 96 chrX 58203113 58203269 -108447027 - URR1A DNA MER1_type -84 142 1 4 1029 584 234 139 0 chrX 58203280 58203438 -108446858 - L1M4 LINE L1 -1112 5034 4855 4 1029 3529 138 44 4 chrX 58203453 58203998 -108446298 - Lx2 LINE L1 -12 6985 6419 4 1029 5688 109 8 3 chrX 58204001 58205018 -108445278 + Lx2 LINE L1 5409 6433 -564 4 1029 213 121 0 0 chrX 58205118 58205151 -108445145 + (TTTC)n Simple_repeat Simple_repeat 3 35 0 4 1029 41591 15 0 6 chrX 58205228 58211404 -108438892 - L1Md_A LINE L1 -3 6579 448 4 1029 409 264 96 10 chrX 58211400 58211585 -108438711 - L1MB3 LINE L1 -1308 4835 4636 4 1029 601 168 22 51 chrX 58211616 58211754 -108438542 - B2_Mm2 SINE B2 -10 185 52 4 1029 332 119 133 13 chrX 58211754 58211829 -108438467 - L1_Mur3 LINE L1 -7356 356 290 4 1029 799 284 46 13 chrX 58212097 58212336 -108437960 + MER63C DNA AcHobo 435 681 -249 4 1029 210 37 0 0 chrX 58212374 58212401 -108437895 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1029 1124 82 0 0 chrX 58212401 58212536 -108437760 - B1_Mus2 SINE Alu -10 137 3 4 1029 280 179 0 0 chrX 58212553 58212609 -108437687 - MER63D DNA AcHobo -617 444 389 4 1029 255 368 48 8 chrX 58212613 58212739 -108437557 - MER58B DNA MER1_type -2 339 209 4 1029 477 310 35 82 chrX 58212742 58212790 -108437506 - MER63B DNA AcHobo -40 396 357 4 1029 3021 55 0 0 chrX 58212790 58213136 -108437160 + ORR1A1 LTR MaLR 1 346 0 4 1029 477 310 35 82 chrX 58213136 58213408 -108436888 - MER63B DNA AcHobo -80 356 97 4 1029 2756 85 3 19 chrX 58213408 58213778 -108436518 + L1Md_F2 LINE L1 6219 6582 0 4 1029 477 310 35 82 chrX 58213778 58213857 -108436439 - MER63B DNA AcHobo -340 96 15 4 1029 625 248 158 5 chrX 58214171 58214451 -108435845 - L1M5 LINE L1 -734 5557 5229 4 1029 202 279 16 0 chrX 58214451 58214512 -108435784 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 1029 473 323 136 38 chrX 58214520 58214784 -108435512 - B4A SINE B4 0 292 3 5 1029 275 123 0 52 chrX 58214838 58214852 -108435444 + A-rich Low_complexity Low_complexity 1 11 0 5 1029 1300 41 0 0 chrX 58214852 58214998 -108435298 + B1_Mus2 SINE Alu 2 147 0 5 1029 275 123 0 52 chrX 58214998 58215060 -108435236 + A-rich Low_complexity Low_complexity 12 73 0 5 1029 760 288 67 46 chrX 58215231 58215708 -108434588 - L1MC5 LINE L1 -467 7494 7008 5 1029 1499 113 0 5 chrX 58215760 58215983 -108434313 - L1_Mur2 LINE L1 -1456 4421 4200 5 1029 8590 131 19 14 chrX 58215983 58217267 -108433029 + Lx4A LINE L1 5767 7056 -2 5 1029 199 95 23 45 chrX 58217267 58217311 -108432985 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 5 1029 327 276 108 74 chrX 58217313 58217571 -108432725 - L1MC5 LINE L1 -1000 6961 6695 5 1029 371 335 51 31 chrX 58217652 58217908 -108432388 - L1M5 LINE L1 -1450 4696 4436 4 1029 1061 210 57 52 chrX 58218077 58218395 -108431901 - MTD LTR MaLR 0 421 91 5 1029 546 344 80 21 chrX 58218486 58218673 -108431623 + B4A SINE B4 85 282 -10 5 1029 216 216 26 39 chrX 58218685 58218762 -108431534 + (CATA)n Simple_repeat Simple_repeat 3 78 0 5 1029 238 143 20 39 chrX 58218705 58218756 -108431540 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1029 213 310 68 11 chrX 58219199 58219287 -108431009 - MIRc SINE MIR -39 229 137 5 1029 802 281 24 9 chrX 58219639 58219851 -108430445 - B3 SINE B2 0 216 2 5 1029 1696 251 63 5 chrX 58219852 58220296 -108430000 - RCHARR1 DNA MER1_type -477 497 28 5 1029 312 338 63 60 chrX 58220339 58220591 -108429705 + LTR48B LTR ERV1 69 321 -323 5 1029 186 133 0 0 chrX 58220594 58220624 -108429672 + (TTG)n Simple_repeat Simple_repeat 2 31 0 5 1029 603 241 179 0 chrX 58220638 58220783 -108429513 + B3 SINE B2 24 194 -22 5 1029 285 282 104 22 chrX 58220831 58220965 -108429331 + LTR48B LTR ERV1 592 736 -51 5 1029 685 246 79 24 chrX 58221074 58221366 -108428930 + MER33 DNA MER1_type 7 314 -10 5 1029 247 355 104 8 chrX 58221385 58221401 -108428895 - ID_B1 SINE B4 -4 220 84 5 1029 425 271 28 18 chrX 58221401 58221510 -108428786 - PB1D10 SINE Alu -5 112 3 5 1029 253 222 97 62 chrX 58222033 58222177 -108428119 - L1MC LINE L1 -2386 5496 5348 5 1029 641 197 46 7 chrX 58222265 58222418 -108427878 - L1M5 LINE L1 -686 5478 5320 5 1029 668 254 231 22 chrX 58223150 58223379 -108426917 + B4 SINE B4 2 278 -14 5 1029 596 280 7 14 chrX 58223491 58223636 -108426660 + ID_B1 SINE B4 81 224 0 5 1029 1107 101 0 0 chrX 58223940 58224088 -108426208 - B1_Mus1 SINE Alu 0 148 1 5 1029 658 204 27 40 chrX 58224088 58224236 -108426060 - B1_Mus2 SINE Alu 0 147 2 5 1029 313 255 19 47 chrX 58224642 58224749 -108425547 + PB1D9 SINE Alu 17 120 0 5 1029 25 31 0 0 chrX 58225990 58226022 -108424274 + AT_rich Low_complexity Low_complexity 1 32 0 5 1029 441 255 0 58 chrX 58226045 58226149 -108424147 - RSINE1 SINE B4 0 165 68 5 1029 1050 116 0 13 chrX 58226443 58226592 -108423704 + B1_Mur3 SINE Alu 1 147 -2 5 1029 452 255 20 65 chrX 58226751 58226952 -108423344 - L1M5 LINE L1 -678 5486 5295 5 1029 7155 107 11 12 chrX 58226963 58228490 -108421806 + Lx LINE L1 5129 6647 -7 5 1029 223 236 0 83 chrX 58228517 58228577 -108421719 - B1_Mur1 SINE Alu 0 149 95 5 1029 1281 150 25 20 chrX 58228577 58228822 -108421474 + Lx4A LINE L1 6811 7056 -2 5 1029 240 218 22 22 chrX 58228932 58229021 -108421275 + (TA)n Simple_repeat Simple_repeat 2 90 0 5 1029 1188 48 0 0 chrX 58229056 58229202 -108421094 - B1_Mm SINE Alu 0 147 2 5 1029 393 75 0 0 chrX 58229233 58229286 -108421010 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 1029 234 0 0 0 chrX 58229336 58229362 -108420934 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 1029 1199 186 9 18 chrX 58229397 58229621 -108420675 - URR1B DNA MER1_type -3 222 1 5 1029 239 355 0 0 chrX 58229628 58229690 -108420606 - RSINE1 SINE B4 -100 65 4 5 1029 1197 254 89 7 chrX 58229874 58230325 -108419971 - L1MB7 LINE L1 -16 6168 5681 5 1029 240 283 0 0 chrX 58230529 58230589 -108419707 + (TATG)n Simple_repeat Simple_repeat 3 62 0 5 1029 774 312 13 69 chrX 58230601 58230904 -108419392 - B4A SINE B4 -4 288 3 5 1029 1243 101 50 0 chrX 58230905 58231084 -108419212 - B2_Mm2 SINE B2 -7 188 1 5 1029 376 291 163 48 chrX 58231092 58231381 -108418915 - L1M5 LINE L1 -1381 4765 4444 5 1029 287 216 134 0 chrX 58231468 58231565 -108418731 + L1M5 LINE L1 5691 5800 -362 5 1029 434 313 147 47 chrX 58232416 58232747 -108417549 - L1M5 LINE L1 -1745 4401 4020 5 1029 292 232 116 0 chrX 58232747 58232816 -108417480 - ID4_ SINE ID -3 80 4 5 1029 434 313 147 47 chrX 58232816 58232886 -108417410 - L1M5 LINE L1 -2127 4019 3960 5 1029 26 0 0 0 chrX 58233104 58233130 -108417166 + AT_rich Low_complexity Low_complexity 1 26 0 5 1029 577 264 26 6 chrX 58233472 58233628 -108416668 + MER45C DNA Tip100 31 189 -764 5 1029 499 305 70 61 chrX 58233989 58234202 -108416094 - ID_B1 SINE B4 -5 219 5 5 1029 564 242 211 48 chrX 58234283 58234560 -108415736 + Kanga1 DNA Tc2 1298 1614 -131 5 1029 784 196 7 0 chrX 58234560 58234698 -108415598 + B1_Mur4 SINE Alu 3 141 -9 5 1029 564 242 211 48 chrX 58234698 58234776 -108415520 + Kanga1 DNA Tc2 1615 1711 -34 5 1029 431 301 63 68 chrX 58234904 58235111 -108415185 - Lx8 LINE L1 -116 7357 7152 5 1029 542 317 106 20 chrX 58235184 58235429 -108414867 + B4A SINE B4 7 272 -20 5 1029 456 51 0 0 chrX 58235912 58235971 -108414325 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1029 296 286 33 0 chrX 58235971 58236062 -108414234 - B4A SINE B4 -27 265 172 5 1029 562 134 27 0 chrX 58236171 58236283 -108414013 + L1_Mus3 LINE L1 6520 6634 -4 5 1029 296 96 75 19 chrX 58236631 58236684 -108413612 - ORR1B2 LTR MaLR 0 367 312 5 1029 324 0 0 0 chrX 58236684 58236720 -108413576 + (TTA)n Simple_repeat Simple_repeat 1 36 0 5 1029 2967 188 37 0 chrX 58236720 58237288 -108413008 - Lx3C LINE L1 -15 6961 6373 5 1029 5989 85 52 10 chrX 58237312 58238214 -108412082 - Lx3_Mus LINE L1 -9 7000 6061 5 1029 1247 233 25 0 chrX 58238214 58238532 -108411764 - Lx3C LINE L1 -622 6354 6029 5 1029 549 154 0 37 chrX 58238530 58238638 -108411658 + L1_Mur1 LINE L1 5252 5355 -531 5 1029 2951 107 2 263 chrX 58238637 58239012 -108411284 + Lx3C LINE L1 5211 5587 -296 5 1029 7846 51 15 2 chrX 58239012 58239992 -108410304 + L1Md_F2 LINE L1 5588 6580 -2 5 1029 3606 88 1 8 chrX 58239992 58240656 -108409640 + Lx3C LINE L1 5361 6013 -963 5 1029 1451 180 71 68 chrX 58240656 58240996 -108409300 - ORR1C1 LTR MaLR -37 341 1 5 1029 676 272 128 0 chrX 58241158 58241353 -108408943 - ID_B1 SINE B4 -4 220 1 5 1029 423 0 0 0 chrX 58241828 58241875 -108408421 + (TTTCC)n Simple_repeat Simple_repeat 1 47 0 5 1029 927 198 0 0 chrX 58241877 58242122 -108408174 + CT-rich Low_complexity Low_complexity 1 245 0 5 1029 259 323 130 8 chrX 58244659 58244684 -108405612 + ID_B1 SINE B4 78 224 0 5 1029 348 238 189 9 chrX 58244684 58244790 -108405506 + B1F SINE Alu 25 149 0 5 1029 198 0 0 0 chrX 58244966 58244988 -108405308 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 1029 416 309 21 14 chrX 58245634 58245654 -108404642 - B1_Mus2 SINE Alu -5 142 1 5 1029 538 298 8 0 chrX 58245654 58245775 -108404521 - ID_B1 SINE B4 -21 203 82 5 1029 501 125 0 0 chrX 58246055 58246143 -108404153 + (CTA)n Simple_repeat Simple_repeat 1 88 0 5 1029 198 0 0 0 chrX 58246143 58246165 -108404131 + (TAG)n Simple_repeat Simple_repeat 3 24 0 5 1029 509 250 44 22 chrX 58246165 58246300 -108403996 - B1_Mur2 SINE Alu -11 138 1 5 1029 562 254 13 27 chrX 58246511 58246661 -108403635 + B1F SINE Alu 2 149 0 5 1029 21 0 0 0 chrX 58248338 58248359 -108401937 + AT_rich Low_complexity Low_complexity 1 21 0 5 1029 391 250 22 11 chrX 58248668 58248757 -108401539 + MER58A DNA MER1_type 2 91 -133 5 1029 757 281 81 65 chrX 58248775 58249098 -108401198 - MTE2a LTR MaLR 0 379 52 5 1029 722 280 16 5 chrX 58249132 58249322 -108400974 + B3 SINE B2 21 212 -4 5 1029 257 254 0 45 chrX 58249352 58249418 -108400878 - MTE2a LTR MaLR -358 63 1 5 1029 323 378 89 10 chrX 58249556 58249759 -108400537 - MIR SINE MIR -21 241 23 5 1029 509 329 53 62 chrX 58249762 58250229 -108400067 - L1MC5 LINE L1 -45 7916 7454 5 1029 683 308 28 46 chrX 58250641 58250859 -108399437 + ID_B1 SINE B4 3 216 -8 5 1029 277 280 0 13 chrX 58250881 58250957 -108399339 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 1029 507 148 124 31 chrX 58250958 58251009 -108399287 + Lx9 LINE L1 7466 7515 -129 5 1029 351 0 0 0 chrX 58251009 58251048 -108399248 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1029 507 148 124 31 chrX 58251048 58251157 -108399139 + Lx9 LINE L1 7516 7641 -3 5 1029 183 129 0 0 chrX 58252409 58252440 -108397856 + (A)n Simple_repeat Simple_repeat 1 31 0 5 1029 1181 68 0 0 chrX 58252474 58252620 -108397676 + B1_Mm SINE Alu 2 147 0 5 1029 555 335 89 22 chrX 58252960 58253229 -108397067 + RMER15 LTR ERVL 275 561 -14 5 1029 273 98 0 0 chrX 58253229 58253270 -108397026 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1029 595 290 144 45 chrX 58253302 58253504 -108396792 - ID_B1 SINE B4 -2 222 1 5 1029 275 224 30 0 chrX 58253573 58253640 -108396656 - MIRb SINE MIR -135 133 65 5 1029 3346 76 4 7 chrX 58253690 58254142 -108396154 + L1_Mus1 LINE L1 6117 6567 0 5 1029 1050 278 85 3 chrX 58254843 58255125 -108395171 - MTE2b LTR MaLR -5 374 70 5 1029 273 246 0 17 chrX 58255492 58255550 -108394746 + RSINE1 SINE B4 9 65 -100 5 1029 257 183 17 0 chrX 58255945 58256005 -108394291 + T-rich Low_complexity Low_complexity 4 64 0 5 1029 251 195 0 25 chrX 58256004 58256083 -108394213 + CT-rich Low_complexity Low_complexity 4 80 0 5 1029 487 263 55 55 chrX 58256301 58256446 -108393850 - ID_B1 SINE B4 -2 222 78 5 1029 1671 124 4 0 chrX 58256751 58257001 -108393295 - ORR1A4 LTR MaLR -8 321 71 5 1029 183 133 0 0 chrX 58257054 58257084 -108393212 - L2c LINE L2 -51 3336 3307 6 1029 344 293 15 68 chrX 58257221 58257353 -108392943 + MIR SINE MIR 88 212 -50 6 1029 207 179 254 0 chrX 58257420 58257487 -108392809 + MIRb SINE MIR 184 267 -1 6 1029 245 264 139 8 chrX 58257851 58257973 -108392323 + MER33 DNA MER1_type 156 293 -31 6 1029 276 224 0 0 chrX 58259527 58259594 -108390702 + CT-rich Low_complexity Low_complexity 3 69 0 6 1029 265 214 155 14 chrX 58260599 58260670 -108389626 - L3 LINE CR1 -248 4241 4161 6 1029 387 199 60 24 chrX 58260734 58260853 -108389443 - B1F SINE Alu 0 120 1 6 1029 260 325 129 8 chrX 58260744 58260868 -108389428 - B4 SINE B4 -87 205 67 6 1029 840 48 0 0 chrX 58261099 58261204 -108389092 + (TATATG)n Simple_repeat Simple_repeat 3 107 0 6 1029 230 330 92 8 chrX 58261547 58261666 -108388630 - MLT1C LTR MaLR -3 464 336 6 1029 3580 200 107 5 chrX 58261676 58262510 -108387786 - Lx6 LINE L1 -15 7445 6527 6 1029 2965 192 40 48 chrX 58262511 58262676 -108387620 + Lx6 LINE L1 5794 5949 -1511 6 1029 2134 123 28 3 chrX 58262676 58262995 -108387301 + ORR1A2 LTR MaLR 1 327 0 6 1029 2965 192 40 48 chrX 58262995 58263562 -108386734 + Lx6 LINE L1 5950 6520 -940 6 1029 2283 191 2 7 chrX 58263672 58264093 -108386203 + MTC LTR MaLR 3 421 0 6 1029 6559 145 37 30 chrX 58264094 58265238 -108385058 + MTC-int LTR MaLR 2 1160 -98 6 1029 857 149 7 39 chrX 58265238 58265392 -108384904 - B1_Mur3 SINE Alu 0 149 1 6 1029 6559 145 37 30 chrX 58265392 58265495 -108384801 + MTC-int LTR MaLR 1161 1258 0 6 1029 2187 186 14 21 chrX 58265495 58265919 -108384377 + MTC LTR MaLR 1 421 0 6 1029 29938 92 6 19 chrX 58266104 58270816 -108379480 - L1_Mus3 LINE L1 0 6638 2005 6 1029 1841 73 0 0 chrX 58270816 58271050 -108379246 - L1_Mus2 LINE L1 -5 6561 6328 6 1029 29938 90 40 10 chrX 58271050 58272588 -108377708 - L1_Mus3 LINE L1 -3879 2004 410 6 1029 341 247 67 11 chrX 58272595 58272685 -108377611 - B3 SINE B2 0 216 122 6 1029 230 263 263 0 chrX 58272667 58272762 -108377534 - B2_Mm2 SINE B2 -67 128 9 6 1029 241 167 24 0 chrX 58273230 58273272 -108377024 - ORR1C2 LTR MaLR 0 384 342 6 1029 961 142 7 0 chrX 58273273 58273421 -108376875 + B1_Mur4 SINE Alu 2 150 0 6 1029 579 233 67 41 chrX 58273450 58273648 -108376648 - ORR1C2 LTR MaLR -30 354 159 6 1029 414 149 18 36 chrX 58273656 58273767 -108376529 + (CAGG)n Simple_repeat Simple_repeat 2 110 0 6 1029 716 222 79 59 chrX 58273769 58273834 -108376462 - ORR1C1 LTR MaLR -115 259 187 6 1029 546 89 0 0 chrX 58273834 58273924 -108376372 + (CA)n Simple_repeat Simple_repeat 2 91 0 6 1029 739 222 79 59 chrX 58273924 58274112 -108376184 - ORR1C1 LTR MaLR -189 189 1 6 1029 346 217 0 12 chrX 58274731 58274815 -108375481 - L1M4 LINE L1 -410 5768 5686 6 1029 599 128 68 12 chrX 58274835 58275165 -108375131 + (CAGG)n Simple_repeat Simple_repeat 1 348 0 6 1029 23 54 0 0 chrX 58275418 58275455 -108374841 + AT_rich Low_complexity Low_complexity 1 37 0 6 1029 313 287 0 0 chrX 58275455 58275542 -108374754 + (TG)n Simple_repeat Simple_repeat 2 88 0 6 1029 537 284 11 74 chrX 58275546 58275721 -108374575 - RSINE1 SINE B4 0 165 2 6 1029 331 321 8 67 chrX 58276007 58276127 -108374169 + RSINE1 SINE B4 53 165 0 6 1029 539 319 25 6 chrX 58276141 58276302 -108373994 + RSINE1 SINE B4 2 165 0 6 1029 327 281 48 24 chrX 58276631 58276755 -108373541 - L1MA6 LINE L1 -197 6103 5977 6 1029 588 211 62 56 chrX 58276924 58277085 -108373211 - RSINE1 SINE B4 0 165 4 6 1029 896 272 126 44 chrX 58277766 58278108 -108372188 + ORR1D2 LTR MaLR 1 370 0 6 1029 450 0 0 0 chrX 58280327 58280377 -108369919 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1029 341 233 0 75 chrX 58281864 58281957 -108368339 - B1_Mur2 SINE Alu 0 149 64 6 1029 423 0 0 0 chrX 58281979 58282026 -108368270 + (TA)n Simple_repeat Simple_repeat 1 47 0 6 1029 791 179 96 7 chrX 58282027 58282162 -108368134 - B1_Mur2 SINE Alu -1 148 2 6 1029 337 312 109 0 chrX 58283113 58283241 -108367055 - MLT1L LTR MaLR -17 593 452 6 1029 273 215 0 58 chrX 58283584 58283653 -108366643 - MLT1L LTR MaLR -545 65 1 6 1029 6778 214 82 37 chrX 58284878 58285509 -108364787 - L1_Mur3 LINE L1 -2215 3665 3003 6 1029 211 0 88 0 chrX 58285509 58285543 -108364753 + (TCTCTG)n Simple_repeat Simple_repeat 2 38 0 6 1029 6778 214 82 37 chrX 58285543 58286718 -108363578 - L1_Mur3 LINE L1 -2878 3002 1775 6 1029 879 260 18 46 chrX 58286718 58286936 -108363360 + B3 SINE B2 3 214 -2 6 1029 6778 214 82 37 chrX 58286936 58287051 -108363245 - L1_Mur3 LINE L1 -4106 1774 1658 6 1029 429 202 61 0 chrX 58287208 58287307 -108362989 - L1_Mur3 LINE L1 -4247 1633 1529 6 1029 446 232 131 21 chrX 58287474 58287619 -108362677 - B4A SINE B4 -8 284 124 6 1029 441 0 0 0 chrX 58288738 58288787 -108361509 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 6 1029 229 33 0 0 chrX 58288954 58288984 -108361312 - ORR1C2 LTR MaLR -2 382 353 6 1029 2165 143 52 57 chrX 58288990 58289375 -108360921 - ORR1C2 LTR MaLR 0 384 2 6 1029 209 292 27 40 chrX 58289757 58289832 -108360464 + L3 LINE CR1 3761 3834 -655 6 1029 210 330 57 0 chrX 58289900 58289988 -108360308 - L2c LINE L2 -41 3346 3254 6 1029 1095 21 7 54 chrX 58290135 58290283 -108360013 - L1Md_F2 LINE L1 -8 6574 6434 6 1029 248 302 57 79 chrX 58290455 58290595 -108359701 + MIRb SINE MIR 96 232 -36 6 1029 441 0 0 0 chrX 58290855 58290904 -108359392 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1029 1215 63 0 0 chrX 58291064 58291206 -108359090 - B1_Mus2 SINE Alu -5 142 1 6 1029 482 357 0 0 chrX 58291309 58291449 -108358847 + B1F1 SINE Alu 1 140 -9 6 1029 2341 123 9 0 chrX 58291670 58291994 -108358302 - ORR1A2 LTR MaLR 0 327 1 6 1029 288 271 68 106 chrX 58292078 58292099 -108358197 + B4A SINE B4 75 225 -63 6 1029 755 170 37 7 chrX 58292099 58292235 -108358061 + B1_Mur2 SINE Alu 10 149 0 6 1029 745 211 0 0 chrX 58292504 58292627 -108357669 - B1_Mur1 SINE Alu -26 123 1 6 1029 675 280 25 108 chrX 58294978 58295218 -108355078 + ID_B1 SINE B4 4 223 -1 6 1029 526 315 48 24 chrX 58296633 58296841 -108353455 - ID_B1 SINE B4 -7 217 5 6 1029 617 179 0 18 chrX 58297384 58297498 -108352798 + B1_Mus2 SINE Alu 35 146 -1 6 1029 189 0 0 0 chrX 58297575 58297596 -108352700 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1029 2979 212 47 18 chrX 58298132 58298791 -108351505 - RMER1C Other Other -2 1340 663 6 1029 358 302 0 10 chrX 58298904 58299001 -108351295 + B4A SINE B4 5 100 -192 6 1029 289 330 0 0 chrX 58300169 58300266 -108350030 - MIR3 SINE MIR -52 156 60 6 1029 225 119 0 0 chrX 58300443 58300485 -108349811 + (GA)n Simple_repeat Simple_repeat 1 42 0 6 1029 236 311 40 0 chrX 58300713 58300787 -108349509 - LTR16B2 LTR ERVL -335 127 51 6 1029 3208 61 13 10 chrX 58300819 58301214 -108349082 - MTA_Mm LTR MaLR 0 396 1 6 1029 641 309 21 11 chrX 58301252 58301442 -108348854 - B3A SINE B2 -6 192 1 6 1029 459 0 0 0 chrX 58301462 58301513 -108348783 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1029 287 200 26 26 chrX 58301562 58301639 -108348657 + MT2A LTR ERVL 108 184 -349 6 1029 243 62 0 0 chrX 58301882 58301914 -108348382 - U6 snRNA snRNA -75 32 1 6 1029 258 198 99 55 chrX 58301919 58302010 -108348286 - L1M5 LINE L1 -1495 4651 4557 6 1029 298 167 83 0 chrX 58302076 58302148 -108348148 - L1M2 LINE L1 -3321 2822 2745 6 1029 7776 81 27 2 chrX 58302287 58303642 -108346654 - L1_Mus3 LINE L1 -9 6629 5235 6 1029 297 0 0 0 chrX 58303642 58303675 -108346621 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 1029 549 0 0 0 chrX 58303675 58303735 -108346561 + (TA)n Simple_repeat Simple_repeat 2 62 0 6 1029 6185 112 33 3 chrX 58303735 58304022 -108346274 - L1_Mus3 LINE L1 -649 5234 4937 6 1029 25 31 0 0 chrX 58304300 58304332 -108345964 + AT_rich Low_complexity Low_complexity 1 32 0 6 1029 322 291 35 0 chrX 58304471 58304557 -108345739 + PB1D10 SINE Alu 27 115 -2 6 1029 1129 80 0 0 chrX 58304723 58304860 -108345436 + B1_Mus1 SINE Alu 1 137 -11 6 1029 609 235 0 0 chrX 58304879 58305058 -108345238 + (TA)n Simple_repeat Simple_repeat 2 180 0 6 1029 4042 81 25 3 chrX 58305058 58305667 -108344629 - MusHAL1 LINE L1 -1802 910 289 6 1029 21 0 0 0 chrX 58305742 58305763 -108344533 + AT_rich Low_complexity Low_complexity 1 21 0 6 1029 252 285 13 103 chrX 58305797 58305924 -108344372 - MIRc SINE MIR -32 236 111 6 1029 1388 236 105 71 chrX 58306114 58306243 -108344053 + MTD LTR MaLR 1 117 -302 6 1029 252 0 0 0 chrX 58306243 58306271 -108344025 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 6 1029 1388 239 105 69 chrX 58306271 58306549 -108343747 + MTD LTR MaLR 118 405 -14 6 1029 846 217 23 160 chrX 58306749 58307012 -108343284 + Lx8 LINE L1 7094 7320 -153 6 1029 1098 279 81 28 chrX 58307011 58307446 -108342850 - L1MC1 LINE L1 -482 5851 5394 6 1029 393 22 0 0 chrX 58307529 58307575 -108342721 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 1029 4691 187 67 94 chrX 58307634 58307874 -108342422 + Lx5 LINE L1 5910 6166 -884 6 1029 545 180 0 39 chrX 58307874 58307978 -108342318 + RLTR22_Mur LTR ERVK 1 100 -1748 6 1029 4691 187 67 94 chrX 58307978 58308761 -108341535 + Lx5 LINE L1 6167 7006 -44 6 1029 246 62 0 0 chrX 58308780 58308812 -108341484 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 6 1029 557 290 0 30 chrX 58308845 58308980 -108341316 + B1F2 SINE Alu 1 131 -18 6 1029 574 295 126 28 chrX 58309342 58309628 -108340668 - MLT1D LTR MaLR -79 426 113 6 1029 231 223 96 22 chrX 58309640 58309731 -108340565 - MTE2a LTR MaLR -4 375 279 6 1029 212 306 0 14 chrX 58309786 58309859 -108340437 + GA-rich Low_complexity Low_complexity 2 73 0 6 1029 242 136 0 43 chrX 58310153 58310199 -108340097 + ORR1B1 LTR MaLR 1 44 -350 6 1029 1302 138 29 11 chrX 58310175 58310405 -108339891 + ORR1B1 LTR MaLR 147 393 -1 6 1029 487 82 0 0 chrX 58310759 58310820 -108339476 + L1_Mm LINE L1 5536 5596 -287 6 1029 2059 120 21 17 chrX 58310820 58311198 -108339098 - RLTR10A LTR ERVK -1 389 1 6 1029 4830 108 23 19 chrX 58311198 58311937 -108338359 - RLTR10-int LTR ERVK -1 1986 1288 6 1029 1952 104 30 0 chrX 58311945 58312213 -108338083 - RLTR10-int LTR ERVK -1260 5282 5007 6 1029 682 200 46 7 chrX 58312213 58312364 -108337932 - RLTR10-int LTR ERVK -6039 503 347 6 1029 420 70 35 0 chrX 58312358 58312415 -108337881 - RLTR10-int LTR ERVK -6365 177 119 6 1029 729 75 33 8 chrX 58312415 58312536 -108337760 + (TTTCC)n Simple_repeat Simple_repeat 5 128 0 6 1029 14757 52 1 5 chrX 58312639 58315167 -108335129 - L1Md_F2 LINE L1 0 6582 4066 7 1029 532 307 0 0 chrX 58315242 58315395 -108334901 - MMERVK10C-int LTR ERVK -7157 424 272 7 1029 570 111 44 0 chrX 58315390 58315480 -108334816 - MMERVK10C-int LTR ERVK -7487 94 1 7 1029 2048 117 9 32 chrX 58315486 58315857 -108334439 - RLTR10A LTR ERVK -12 347 1 7 1029 7591 80 21 13 chrX 58315857 58316888 -108333408 + L1_Mus4 LINE L1 5593 6632 -4 7 1029 4751 191 53 66 chrX 58317075 58317452 -108332844 + Lx7 LINE L1 5962 6359 -1337 7 1029 4579 134 73 11 chrX 58317452 58318146 -108332150 + RMER19A LTR ERVK 1 737 0 7 1029 4751 191 53 66 chrX 58318146 58318832 -108331464 + Lx7 LINE L1 6360 7011 -685 7 1029 3774 149 71 22 chrX 58318835 58319568 -108330728 - L1_Mur3 LINE L1 -516 5361 4593 7 1029 740 127 34 0 chrX 58319563 58319681 -108330615 + L1_Mur3 LINE L1 5360 5481 -399 7 1029 1179 204 141 49 chrX 58319681 58319985 -108330311 - IAPEY3_LTR LTR ERVK 0 332 1 7 1029 1382 198 55 15 chrX 58319985 58320328 -108329968 - IAP-d-int LTR ERVK 0 6481 6125 7 1029 1750 119 57 14 chrX 58320345 58320667 -108329629 - IAPEY3-int LTR ERVK -342 7338 6965 7 1029 1384 129 107 0 chrX 58320667 58320892 -108329404 - IAP-d-int LTR ERVK -1287 5255 5007 7 1029 378 140 0 0 chrX 58320892 58320949 -108329347 - IAP-d-int LTR ERVK -6039 503 447 7 1029 759 222 134 0 chrX 58320977 58321148 -108329148 - IAP-d-int LTR ERVK -4903 503 310 7 1029 858 133 14 0 chrX 58321128 58321271 -108329025 - MMERVK10C-int LTR ERVK -6729 852 708 7 1029 1827 130 112 117 chrX 58321370 58321798 -108328498 - MMERVK10C-int LTR ERVK -7155 426 1 7 1029 1165 201 128 36 chrX 58321798 58322102 -108328194 - IAPEY3_LTR LTR ERVK 0 332 1 7 1029 2848 215 214 37 chrX 58322102 58323413 -108326883 + Lx5 LINE L1 5476 7460 0 7 1029 1489 236 48 35 chrX 58323385 58323785 -108326511 + Lx7 LINE L1 6973 7377 -319 7 1029 1592 168 14 62 chrX 58323820 58324175 -108326121 + Lx7 LINE L1 7359 7696 0 7 1029 579 219 437 24 chrX 58324430 58324805 -108325491 - RMER21B LTR ERV1 -279 563 34 7 1029 425 378 0 12 chrX 58324820 58324986 -108325310 - RMER15-int LTR ERVL -4683 316 153 7 1029 491 268 56 7 chrX 58325112 58325255 -108325041 - RMER15 LTR ERVL -1 574 425 7 1029 256 292 28 0 chrX 58325298 58325370 -108324926 - Lx8 LINE L1 -247 7226 7153 7 1029 869 153 44 6 chrX 58325397 58325555 -108324741 - URR1B DNA MER1_type -2 223 60 7 1029 556 284 33 22 chrX 58325604 58325784 -108324512 - Lx8 LINE L1 -250 7223 7042 7 1029 22 0 0 0 chrX 58326182 58326204 -108324092 + AT_rich Low_complexity Low_complexity 1 22 0 7 1029 183 80 0 0 chrX 58326452 58326477 -108323819 + (TAA)n Simple_repeat Simple_repeat 2 26 0 7 1029 454 275 195 0 chrX 58326487 58326636 -108323660 - B3A SINE B2 -16 182 5 7 128 492 324 153 21 chrX 58326777 58327162 -108323134 - L1M5 LINE L1 -1304 4842 4407 7 1030 1333 248 29 47 chrX 58327172 58327559 -108322737 + MTE2a LTR MaLR 23 419 0 7 1030 25 0 0 0 chrX 58328252 58328277 -108322019 + GC_rich Low_complexity Low_complexity 1 25 0 7 1030 648 36 0 0 chrX 58328790 58328873 -108321423 + (CA)n Simple_repeat Simple_repeat 1 83 0 7 1030 5942 153 17 9 chrX 58329483 58330405 -108319891 + Lx4A LINE L1 6118 7047 -11 7 1030 180 182 0 0 chrX 58330405 58330449 -108319847 + (ATG)n Simple_repeat Simple_repeat 3 46 0 7 1030 9270 98 22 12 chrX 58330887 58330906 -108319390 + MusHAL1 LINE L1 669 687 -2025 7 1030 5238 70 15 85 chrX 58330906 58331714 -108318582 + RMER17A LTR ERVK 1 751 0 7 1030 9270 98 21 4 chrX 58331714 58333098 -108317198 + MusHAL1 LINE L1 688 2086 -626 7 1030 253 221 59 0 chrX 58333266 58333334 -108316962 - L1MD1 LINE L1 -141 6101 6030 7 1030 19566 105 151 11 chrX 58333345 58338023 -108312273 - L1_Mus1 LINE L1 -3 6651 1164 7 1030 7724 43 1 1 chrX 58338018 58339515 -108310781 - L1Md_F2 LINE L1 -13 6569 5073 7 1030 5154 104 0 24 chrX 58339514 58340340 -108309956 - L1VL2 LINE L1 -5464 871 66 7 1030 235 299 160 28 chrX 58340402 58340859 -108309437 - L1M4c LINE L1 -2196 4186 3670 7 1030 307 259 62 0 chrX 58340889 58340906 -108309390 - B3 SINE B2 0 216 200 7 1030 396 0 0 0 chrX 58340906 58340950 -108309346 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 1030 307 259 62 0 chrX 58340950 58341013 -108309283 - B3 SINE B2 -17 199 132 7 1030 189 196 0 0 chrX 58341220 58341266 -108309030 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 7 1030 333 255 10 87 chrX 58341266 58341369 -108308927 - RSINE1 SINE B4 -69 96 2 7 1030 404 264 8 0 chrX 58341370 58341491 -108308805 - L1M4c LINE L1 -4728 1656 1535 7 1030 317 310 126 7 chrX 58341565 58341708 -108308588 - RSINE1 SINE B4 -5 160 1 7 1030 227 338 0 0 chrX 58341884 58341961 -108308335 - L1M2 LINE L1 -4572 2277 2201 7 1030 338 0 24 0 chrX 58342033 58342075 -108308221 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 7 1030 1093 92 0 0 chrX 58342077 58342218 -108308078 - B1_Mus1 SINE Alu -6 142 2 7 1030 22 0 0 0 chrX 58342225 58342247 -108308049 + AT_rich Low_complexity Low_complexity 1 22 0 7 1030 450 243 70 73 chrX 58342297 58342625 -108307671 - L1M2 LINE L1 -4838 2011 1685 7 1030 395 256 112 87 chrX 58347418 58347705 -108302591 + Lx8 LINE L1 7179 7472 -1 7 1030 378 0 0 0 chrX 58347726 58347768 -108302528 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1030 270 0 0 0 chrX 58348087 58348117 -108302179 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 7 1030 6621 129 4 6 chrX 58348311 58349671 -108300625 - Lx LINE L1 -7 6647 5288 7 1030 1381 182 102 4 chrX 58349993 58350195 -108300101 + RMER10B LTR ERVL 1 203 -195 7 1030 228 67 0 0 chrX 58350195 58350225 -108300071 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 1030 1381 182 102 4 chrX 58350225 58350297 -108299999 + RMER10B LTR ERVL 204 301 -97 7 1030 1099 137 10 5 chrX 58350297 58350503 -108299793 - L1_Mur2 LINE L1 -579 5298 5092 7 1030 1140 49 0 0 chrX 58350516 58350658 -108299638 - B1_Mm SINE Alu 0 147 6 7 1030 2261 53 0 0 chrX 58350674 58350955 -108299341 - L1Md_A LINE L1 0 6582 6302 7 1030 1761 33 0 0 chrX 58350977 58351192 -108299104 + L1_Mm LINE L1 5382 5596 -287 7 1030 8572 166 26 76 chrX 58351183 58351549 -108298747 - L1_Mur2 LINE L1 -764 5113 4723 7 1030 3854 50 23 0 chrX 58351549 58352031 -108298265 - L1_Mus1 LINE L1 0 6567 6075 7 1030 8572 166 26 76 chrX 58352031 58352851 -108297445 - L1_Mur2 LINE L1 -1155 4722 3902 7 1030 1022 47 0 0 chrX 58352851 58352979 -108297317 - B1_Mm SINE Alu 0 147 20 7 1030 8572 166 26 76 chrX 58352979 58353703 -108296593 - L1_Mur2 LINE L1 -1155 3901 3176 7 1030 4271 103 35 41 chrX 58353701 58354411 -108295885 - L1VL4 LINE L1 -5413 889 184 7 1030 228 179 14 43 chrX 58354880 58354950 -108295346 + T-rich Low_complexity Low_complexity 2 69 0 7 1030 2310 212 93 13 chrX 58356253 58356879 -108293417 - Lx9 LINE L1 -7 7637 6962 7 1030 4653 76 24 8 chrX 58358177 58358950 -108291346 - Lx3B LINE L1 -986 5987 5211 7 1030 5404 125 69 3 chrX 58358958 58359846 -108290450 + Lx3B LINE L1 6024 6969 -4 7 1030 832 286 24 0 chrX 58360006 58360216 -108290080 - B3 SINE B2 0 216 2 7 1030 6450 114 21 27 chrX 58360546 58361676 -108288620 + Lx LINE L1 5529 6652 -2 7 1030 692 317 33 18 chrX 58362161 58362434 -108287862 - B4 SINE B4 -12 280 4 7 1030 27 29 0 0 chrX 58362728 58362762 -108287534 + AT_rich Low_complexity Low_complexity 1 34 0 7 1030 864 184 20 0 chrX 58363160 58363307 -108286989 - B1_Mur4 SINE Alu 0 150 1 7 1030 302 244 33 42 chrX 58363344 58363464 -108286832 - Lx8 LINE L1 -5 7468 7350 7 1030 357 113 19 0 chrX 58363940 58363993 -108286303 + B3 SINE B2 1 54 -162 7 1030 531 195 119 84 chrX 58364639 58364841 -108285455 + B3 SINE B2 2 210 -6 7 1030 2321 56 10 0 chrX 58364990 58365293 -108285003 - L1_Mus1 LINE L1 -124 6443 6138 7 1030 435 369 38 0 chrX 58365385 58365542 -108284754 - RSINE1 SINE B4 0 165 3 7 1030 5023 82 14 3 chrX 58365728 58366423 -108283873 + L1_Mus3 LINE L1 5936 6638 0 7 1030 322 281 35 105 chrX 58366451 58366594 -108283702 - B1F2 SINE Alu 0 149 17 7 1030 247 307 127 13 chrX 58366794 58367022 -108283274 + L1MA5 LINE L1 5702 5955 -345 7 1030 226 212 275 0 chrX 58368342 58368422 -108281874 + PB1D10 SINE Alu 2 103 -14 7 1030 310 332 84 0 chrX 58368447 58368637 -108281659 - L1MC4 LINE L1 -1063 6979 6774 7 1030 225 94 0 0 chrX 58370289 58370321 -108279975 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 7 1030 198 0 0 0 chrX 58370506 58370528 -108279768 + (TAA)n Simple_repeat Simple_repeat 2 23 0 7 1030 283 271 37 22 chrX 58371310 58371446 -108278850 - L1M5 LINE L1 -392 5732 5595 7 1030 329 321 15 35 chrX 58371629 58371826 -108278470 - L1M5 LINE L1 -1085 5061 4869 7 1030 331 222 37 0 chrX 58372023 58372131 -108278165 + (TA)n Simple_repeat Simple_repeat 1 112 0 7 1030 237 65 0 0 chrX 58372146 58372177 -108278119 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 7 1030 324 319 97 9 chrX 58373230 58373344 -108276952 + MIR SINE MIR 35 158 -104 7 1030 586 364 25 25 chrX 58375241 58375478 -108274818 + MIR SINE MIR 5 241 -21 7 1030 852 271 0 19 chrX 58376180 58376391 -108273905 - B3 SINE B2 -9 207 1 7 1030 430 349 50 15 chrX 58376684 58376885 -108273411 + MIR SINE MIR 21 228 -34 7 1030 306 0 0 0 chrX 58376989 58377023 -108273273 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1030 736 265 132 0 chrX 58378504 58378693 -108271603 + ID_B1 SINE B4 6 219 -5 7 1030 505 341 22 0 chrX 58379861 58379996 -108270300 + RSINE1 SINE B4 8 145 -20 7 1030 198 0 0 0 chrX 58380959 58380981 -108269315 + (CATAG)n Simple_repeat Simple_repeat 2 23 0 7 1030 26 30 0 0 chrX 58381706 58381739 -108268557 + AT_rich Low_complexity Low_complexity 1 33 0 7 1030 1027 23 38 0 chrX 58384014 58384145 -108266151 + B1_Mus2 SINE Alu 12 147 0 7 1030 366 61 0 0 chrX 58385040 58385089 -108265207 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 7 1030 219 69 0 0 chrX 58386323 58386352 -108263944 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 1030 231 167 0 0 chrX 58386596 58386638 -108263658 + (TTA)n Simple_repeat Simple_repeat 2 43 0 7 1030 2081 252 55 44 chrX 58386713 58387689 -108262607 - Lx5 LINE L1 -18 7032 6153 7 1030 849 151 25 38 chrX 58387667 58387874 -108262422 - Lx5 LINE L1 -1452 6008 5819 7 1030 909 274 132 39 chrX 58388240 58388824 -108261472 - Charlie2a DNA MER1_type -72 2789 2143 7 1030 313 217 0 55 chrX 58388824 58388897 -108261399 - ID4 SINE ID -13 70 2 7 1030 909 274 132 39 chrX 58388897 58388972 -108261324 - Charlie2a DNA MER1_type -719 2142 2069 7 1030 291 321 0 185 chrX 58389010 58389140 -108261156 + PB1D10 SINE Alu 7 112 -5 7 1030 893 272 138 22 chrX 58389372 58389834 -108260462 - Charlie2a DNA MER1_type -909 1952 1437 7 1030 361 266 154 24 chrX 58389899 58390269 -108260027 - Charlie2a DNA MER1_type -1538 1323 906 7 1030 292 364 16 0 chrX 58390472 58390593 -108259703 - Charlie2a DNA MER1_type -2713 148 26 7 1030 228 260 14 0 chrX 58392628 58392701 -108257595 - Lx9 LINE L1 -16 7628 7555 7 1030 208 121 0 0 chrX 58392726 58392759 -108257537 + (GA)n Simple_repeat Simple_repeat 2 34 0 7 1030 681 253 6 61 chrX 58392781 58392962 -108257334 - MTD LTR MaLR -53 366 196 7 1030 5184 206 54 9 chrX 58392978 58394036 -108256260 - Lx9 LINE L1 -8 7636 6532 7 1030 460 287 17 0 chrX 58394062 58394177 -108256119 + MER45A DNA Tip100 54 170 -8 7 1030 181 261 120 80 chrX 58394840 58394915 -108255381 + L4 LINE RTE 1100 1177 -852 8 1030 4258 200 49 85 chrX 58395542 58396632 -108253664 - Lx5 LINE L1 -177 6873 5824 8 1030 29 0 0 0 chrX 58396848 58396877 -108253419 + AT_rich Low_complexity Low_complexity 1 29 0 8 1030 307 284 92 49 chrX 58397588 58397751 -108252545 + MIRc SINE MIR 66 235 -33 8 1030 387 206 243 36 chrX 58398434 58398545 -108251751 + RSINE1 SINE B4 3 136 -29 8 1030 189 0 0 0 chrX 58398566 58398587 -108251709 + (TG)n Simple_repeat Simple_repeat 2 22 0 8 1030 360 0 0 0 chrX 58398589 58398629 -108251667 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 1030 579 226 305 6 chrX 58398646 58398967 -108251329 + L1MA7 LINE L1 5810 6226 -65 8 1030 1816 113 20 7 chrX 58398978 58399273 -108251023 - Lx LINE L1 0 6654 6356 8 1030 726 86 16 8 chrX 58399287 58399416 -108250880 - L1_Mus3 LINE L1 0 6638 6509 8 1030 1908 102 74 62 chrX 58400295 58400618 -108249678 + ORR1A2 LTR MaLR 1 327 0 8 1030 10440 130 75 9 chrX 58400621 58402440 -108247856 + ORR1A2-int LTR MaLR 25 1963 0 8 1030 1817 138 51 3 chrX 58402440 58402752 -108247544 + ORR1A2 LTR MaLR 1 327 0 8 1030 1983 64 0 103 chrX 58403282 58403594 -108246702 + L1_Mus2 LINE L1 6287 6566 0 8 1030 454 317 0 14 chrX 58403611 58403752 -108246544 + B1F SINE Alu 2 140 -9 8 1030 464 0 18 0 chrX 58404671 58404727 -108245569 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 1030 220 310 120 53 chrX 58404942 58405092 -108245204 + MIR3 SINE MIR 44 203 -5 8 1030 519 223 86 0 chrX 58405211 58405350 -108244946 - L1MA4 LINE L1 -398 5902 5752 8 1030 311 272 167 0 chrX 58406405 58406519 -108243777 + MIR SINE MIR 63 195 -67 8 1030 336 111 0 0 chrX 58409534 58409588 -108240708 + (TTCA)n Simple_repeat Simple_repeat 1 54 0 8 1030 200 331 65 39 chrX 58409823 58409977 -108240319 - L2c LINE L2 -144 3243 3086 8 1030 2304 103 19 6 chrX 58410038 58410361 -108239935 - ORR1A2 LTR MaLR 0 327 1 8 1030 9582 142 38 14 chrX 58410361 58412112 -108238184 - ORR1A2-int LTR MaLR 0 1792 1 8 1030 2084 117 52 0 chrX 58412112 58412419 -108237877 - ORR1A2 LTR MaLR 0 327 5 8 1030 24 32 0 0 chrX 58413349 58413380 -108236916 + AT_rich Low_complexity Low_complexity 1 31 0 8 1030 267 270 95 0 chrX 58413380 58413454 -108236842 - B4A SINE B4 -211 81 1 8 1030 223 319 0 27 chrX 58414460 58414534 -108235762 + MIRc SINE MIR 197 268 0 8 1030 431 299 34 56 chrX 58414966 58415200 -108235096 - MER58B DNA MER1_type 0 341 113 8 1030 358 303 11 0 chrX 58415739 58415828 -108234468 - Tigger7 DNA MER2_type -1895 596 507 8 1030 344 232 71 0 chrX 58416103 58416215 -108234081 - Tigger7 DNA MER2_type -1991 500 381 8 1030 836 133 147 52 chrX 58416235 58416342 -108233954 - Lx3B LINE L1 -4 6969 6855 8 1030 528 16 0 0 chrX 58416342 58416403 -108233893 + (CACCC)n Simple_repeat Simple_repeat 4 64 0 8 1030 836 133 147 52 chrX 58416403 58416486 -108233810 - Lx3B LINE L1 -119 6854 6762 8 1030 583 306 214 7 chrX 58416525 58416562 -108233734 - Tigger7 DNA MER2_type -2153 338 302 8 1030 270 0 0 0 chrX 58416562 58416592 -108233704 + (TTA)n Simple_repeat Simple_repeat 2 31 0 8 1030 583 306 214 7 chrX 58416592 58416834 -108233462 - Tigger7 DNA MER2_type -2190 301 2 8 1030 271 243 14 0 chrX 58416842 58416912 -108233384 - MER53 DNA hAT -116 77 7 8 1030 441 0 0 0 chrX 58417806 58417855 -108232441 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 1030 21 71 0 0 chrX 58418604 58418646 -108231650 + AT_rich Low_complexity Low_complexity 1 42 0 8 1030 1141 128 148 0 chrX 58418988 58419184 -108231112 + URR1A DNA MER1_type 1 225 -1 8 1030 432 0 0 0 chrX 58419338 58419386 -108230910 + (TA)n Simple_repeat Simple_repeat 2 49 0 8 1030 25 31 0 0 chrX 58420027 58420059 -108230237 + AT_rich Low_complexity Low_complexity 1 32 0 8 1030 478 321 22 0 chrX 58420691 58420828 -108229468 - ID_B1 SINE B4 0 224 85 8 1030 680 271 31 20 chrX 58420892 58421088 -108229208 - B3A SINE B2 0 198 1 8 1030 226 234 0 0 chrX 58421180 58421227 -108229069 + B1F2 SINE Alu 16 62 -87 8 1030 396 306 0 61 chrX 58421649 58421764 -108228532 - PB1D10 SINE Alu -7 110 3 8 1030 326 263 0 50 chrX 58421706 58421786 -108228510 - ID_B1 SINE B4 -83 141 66 8 1030 564 84 0 0 chrX 58424121 58424204 -108226092 + (TG)n Simple_repeat Simple_repeat 2 84 0 8 1030 630 329 49 18 chrX 58424938 58425161 -108225135 + B4A SINE B4 8 237 -55 8 1030 327 285 102 38 chrX 58425338 58425495 -108224801 - LTR73 LTR ERV1 -222 350 184 8 1030 732 55 18 9 chrX 58425542 58425653 -108224643 + (TTTC)n Simple_repeat Simple_repeat 4 115 0 8 1030 829 265 15 24 chrX 58425665 58425870 -108224426 - ID_B1 SINE B4 -19 205 3 8 1030 305 377 43 19 chrX 58426050 58426261 -108224035 + L1MC LINE L1 5368 5583 -2299 8 1030 253 338 0 0 chrX 58430245 58430325 -108219971 + ID2 SINE ID 2 81 -2 8 1030 746 134 0 8 chrX 58430453 58430581 -108219715 + (TA)n Simple_repeat Simple_repeat 2 128 0 8 1030 546 57 0 0 chrX 58431368 58431438 -108218858 + (TG)n Simple_repeat Simple_repeat 2 71 0 8 1030 484 266 199 50 chrX 58431471 58431712 -108218584 - B4 SINE B4 -9 283 7 8 1030 2627 111 8 0 chrX 58431943 58432330 -108217966 + L1_Mus3 LINE L1 6246 6635 -3 8 1030 653 256 85 19 chrX 58432917 58433128 -108217168 + MIRb SINE MIR 27 251 -17 8 1030 486 88 0 0 chrX 58433128 58433196 -108217100 + (TTA)n Simple_repeat Simple_repeat 3 70 0 8 1030 244 376 76 28 chrX 58434552 58434697 -108215599 + MER58A DNA MER1_type 10 161 -63 8 1030 305 353 67 39 chrX 58435497 58435809 -108214487 - Lx8 LINE L1 -3 7470 7150 8 1030 312 91 0 0 chrX 58439819 58439863 -108210433 + (TAA)n Simple_repeat Simple_repeat 3 46 0 8 1030 798 257 54 9 chrX 58439867 58440091 -108210205 - MIR SINE MIR -21 241 8 8 1030 263 189 19 0 chrX 58440849 58440902 -108209394 - L2a LINE L2 0 3426 3373 8 1030 359 333 0 77 chrX 58441260 58441364 -108208932 + PB1D10 SINE Alu 1 96 -21 8 1030 1070 95 0 20 chrX 58441365 58441515 -108208781 - B1_Mus1 SINE Alu 0 148 2 8 1030 234 345 0 0 chrX 58441868 58441926 -108208370 - B4A SINE B4 -154 138 81 8 1030 207 0 0 0 chrX 58442995 58443018 -108207278 + (TC)n Simple_repeat Simple_repeat 2 24 0 8 1030 219 103 0 0 chrX 58443018 58443056 -108207240 + (TA)n Simple_repeat Simple_repeat 2 40 0 8 1030 441 0 0 0 chrX 58443155 58443204 -108207092 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 8 1030 694 253 91 40 chrX 58443212 58443410 -108206886 + B4A SINE B4 13 220 -72 8 1030 210 291 0 0 chrX 58443489 58443544 -108206752 + (CA)n Simple_repeat Simple_repeat 1 55 0 8 1030 342 306 92 33 chrX 58443768 58443920 -108206376 - RSINE1 SINE B4 -1 164 4 8 1030 21 0 0 0 chrX 58444454 58444475 -108205821 + AT_rich Low_complexity Low_complexity 1 21 0 8 1030 277 244 81 0 chrX 58445145 58445231 -108205065 - L1MA5 LINE L1 -51 6249 6157 8 1030 305 306 127 105 chrX 58445290 58445834 -108204462 - L1M5 LINE L1 -1797 4349 3794 8 1030 28 0 0 0 chrX 58446315 58446343 -108203953 + AT_rich Low_complexity Low_complexity 1 28 0 8 1030 471 141 261 11 chrX 58446871 58447051 -108203245 - Lx9 LINE L1 -1 7643 7419 8 1030 423 132 131 9 chrX 58447091 58447198 -108203098 - Lx9 LINE L1 -134 7510 7391 8 1030 613 234 16 8 chrX 58447426 58447551 -108202745 - RSINE1 SINE B4 -37 128 3 8 1030 321 208 0 115 chrX 58447783 58447870 -108202426 - HAL1-3A_ME LINE L1 -803 2055 1979 8 1030 213 39 0 0 chrX 58447870 58447896 -108202400 + (GA)n Simple_repeat Simple_repeat 2 27 0 8 1030 353 145 0 13 chrX 58447898 58447975 -108202321 + (TG)n Simple_repeat Simple_repeat 1 76 0 8 1030 260 346 36 90 chrX 58449238 58449349 -108200947 + B3 SINE B2 87 191 -25 8 1030 513 306 225 28 chrX 58449896 58449968 -108200328 - MLT1A0 LTR MaLR -18 347 244 8 1030 357 24 0 0 chrX 58449968 58450010 -108200286 + (TG)n Simple_repeat Simple_repeat 1 42 0 8 1030 513 306 225 28 chrX 58450010 58450226 -108200070 - MLT1A0 LTR MaLR -122 243 2 8 1030 25 0 0 0 chrX 58450310 58450335 -108199961 + AT_rich Low_complexity Low_complexity 1 25 0 8 1030 295 354 40 0 chrX 58450379 58450478 -108199818 - B3A SINE B2 -90 108 6 8 1030 319 311 395 30 chrX 58450663 58451065 -108199231 - MLT1H LTR MaLR 0 549 1 8 1030 234 378 103 85 chrX 58451233 58451398 -108198898 - MLT1H-int LTR MaLR -373 1014 847 8 1030 1167 197 10 19 chrX 58451496 58451703 -108198593 - B3 SINE B2 -10 206 2 8 1030 696 330 4 9 chrX 58451703 58451932 -108198364 - MLT1H-int LTR MaLR -982 427 200 8 1030 283 193 32 64 chrX 58452066 58452160 -108198136 - L1MA5 LINE L1 -1 6299 6209 8 1030 435 266 78 15 chrX 58452367 58452573 -108197723 + L1M2 LINE L1 2228 2446 -3697 8 1030 584 148 0 9 chrX 58452983 58453092 -108197204 + (TA)n Simple_repeat Simple_repeat 2 109 0 8 1030 218 156 22 0 chrX 58453122 58453167 -108197129 + GA-rich Low_complexity Low_complexity 1 46 0 8 1030 636 341 90 43 chrX 58453176 58453455 -108196841 - MLT1H LTR MaLR -214 335 44 8 1030 311 244 35 174 chrX 58455166 58455310 -108194986 - MLT1A1 LTR MaLR -280 128 5 8 1030 246 62 0 0 chrX 58455423 58455455 -108194841 + (T)n Simple_repeat Simple_repeat 1 32 0 8 1030 764 246 33 66 chrX 58455582 58455826 -108194470 + MLT1B LTR MaLR 1 236 -154 8 1030 267 340 9 76 chrX 58455832 58455937 -108194359 + PB1D10 SINE Alu 4 101 -16 8 1030 334 309 80 14 chrX 58455976 58456114 -108194182 + MLT1B LTR MaLR 244 390 0 8 1030 1555 240 138 45 chrX 58456206 58456677 -108193619 + ORR1D1-int LTR MaLR 588 1102 -268 8 1030 1477 248 57 31 chrX 58456683 58457037 -108193259 + ORR1D1 LTR MaLR 8 370 -4 8 1030 638 264 14 0 chrX 58457312 58457452 -108192844 - B1_Mur1 SINE Alu -7 142 1 8 1030 287 330 114 27 chrX 58457851 58458035 -108192261 - MLT1H LTR MaLR -205 344 145 8 1031 363 384 59 30 chrX 58458751 58458987 -108191309 - Helitron3Na_Mam RC Helitron -130 356 114 8 1031 247 135 0 0 chrX 58459137 58459174 -108191122 + MurSatRep1 Unknown Unknown 227 263 -1874 8 1031 519 195 55 0 chrX 58459179 58459302 -108190994 - B2_Mm2 SINE B2 -8 190 53 8 1031 5144 187 96 6 chrX 58459388 58460425 -108189871 - Lx5 LINE L1 0 7050 5921 8 1031 627 179 19 19 chrX 58460444 58460603 -108189693 + GA-rich Low_complexity Low_complexity 3 161 0 8 1031 1040 81 7 0 chrX 58460611 58460759 -108189537 + (GAA)n Simple_repeat Simple_repeat 1 149 0 8 1031 831 219 153 9 chrX 58460759 58461063 -108189233 + MTD LTR MaLR 56 404 -15 9 1031 253 346 79 65 chrX 58461697 58461836 -108188460 - MLT1A1 LTR MaLR 0 408 268 9 1031 1556 196 12 28 chrX 58463071 58463396 -108186900 - RLTR40 LTR ERVK -4 813 494 9 1031 1761 139 41 74 chrX 58463402 58463768 -108186528 + ORR1B1 LTR MaLR 41 394 0 9 1031 1952 191 138 44 chrX 58463768 58464225 -108186071 - RLTR40 LTR ERVK -308 509 4 9 1031 712 59 6 264 chrX 58464779 58464969 -108185327 - L1_Mus2 LINE L1 -136 6430 6293 9 1031 1061 37 0 0 chrX 58464969 58465103 -108185193 + L1_Mus2 LINE L1 6432 6565 -1 9 1031 914 153 28 0 chrX 58465206 58465350 -108184946 + B1_Mur4 SINE Alu 1 148 -2 9 1031 648 32 32 0 chrX 58465351 58465446 -108184850 + (GA)n Simple_repeat Simple_repeat 1 98 0 9 1031 2733 66 0 0 chrX 58466149 58466497 -108183799 + L1_Mus1 LINE L1 6219 6566 -1 9 1031 6181 115 5 20 chrX 58467121 58468099 -108182197 - Lx3B LINE L1 -5 6968 6006 9 1031 1577 45 0 0 chrX 58468095 58468296 -108182000 - L1Md_F2 LINE L1 0 6582 6382 9 1031 30062 66 24 1 chrX 58468300 58472996 -108177300 - L1Md_F2 LINE L1 0 6582 1773 9 1031 315 0 0 0 chrX 58473238 58473273 -108177023 + (CA)n Simple_repeat Simple_repeat 2 36 0 9 1031 297 0 0 0 chrX 58473273 58473305 -108176991 + (GA)n Simple_repeat Simple_repeat 2 34 0 9 1031 293 306 131 71 chrX 58473341 58473524 -108176772 + ORR1E LTR MaLR 1 194 -165 9 1031 242 341 35 12 chrX 58473523 58473609 -108176687 - RSINE1 SINE B4 -76 89 2 9 1031 363 310 68 23 chrX 58473629 58473761 -108176535 - MIR SINE MIR -114 148 11 9 1031 277 280 119 18 chrX 58473762 58473871 -108176425 + Charlie20a DNA Charlie 151 270 -537 9 1031 782 207 6 0 chrX 58474368 58474547 -108175749 + CT-rich Low_complexity Low_complexity 1 180 0 9 1031 875 59 8 0 chrX 58474549 58474667 -108175629 + (TTC)n Simple_repeat Simple_repeat 1 119 0 9 1031 1066 104 0 0 chrX 58474667 58474811 -108175485 - B1_Mus1 SINE Alu -4 144 1 9 1031 743 315 128 25 chrX 58475567 58475606 -108174690 - MLT2B2 LTR ERVL -10 505 463 9 1031 330 45 0 0 chrX 58475606 58475650 -108174646 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 1031 743 318 134 22 chrX 58475650 58476017 -108174279 - MLT2B2 LTR ERVL -53 462 44 9 1031 360 0 0 0 chrX 58476039 58476079 -108174217 + (TG)n Simple_repeat Simple_repeat 1 40 0 9 1031 1032 119 0 0 chrX 58476079 58476238 -108174058 + (TA)n Simple_repeat Simple_repeat 2 160 0 9 1031 297 0 0 0 chrX 58476238 58476270 -108174026 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1031 184 369 134 7 chrX 58476337 58476479 -108173817 + L2 LINE L2 2920 3079 -340 9 1031 343 396 28 17 chrX 58476687 58476864 -108173432 - MLT1L LTR MaLR -27 583 405 9 1031 340 347 34 55 chrX 58477080 58477315 -108172981 - LTR79 LTR ERVL -30 497 268 9 1031 399 89 0 0 chrX 58478957 58479013 -108171283 + (CA)n Simple_repeat Simple_repeat 1 56 0 9 1031 22 56 0 0 chrX 58479325 58479361 -108170935 + AT_rich Low_complexity Low_complexity 1 36 0 9 1031 1841 179 53 55 chrX 58479945 58480324 -108169972 + ORR1C1 LTR MaLR 1 378 0 9 1031 2515 284 46 28 chrX 58480515 58481314 -108168982 - Lx9 LINE L1 -188 7456 6643 9 1031 489 312 86 71 chrX 58482096 58482492 -108167804 + MARNA DNA Mariner 110 511 -75 9 1031 5666 212 41 23 chrX 58482750 58483045 -108167251 + Lx5 LINE L1 5840 6138 -912 9 1031 252 0 0 0 chrX 58483045 58483073 -108167223 + (TGG)n Simple_repeat Simple_repeat 2 29 0 9 1031 5666 212 41 23 chrX 58483073 58483966 -108166330 + Lx5 LINE L1 6139 7049 -1 9 1031 356 388 30 55 chrX 58484199 58484398 -108165898 - LTR16A LTR ERVL -159 292 99 9 1031 22 80 0 0 chrX 58486061 58486111 -108164185 + AT_rich Low_complexity Low_complexity 1 50 0 9 1031 21 0 0 0 chrX 58486121 58486142 -108164154 + AT_rich Low_complexity Low_complexity 1 21 0 9 1031 1440 115 24 28 chrX 58487242 58487492 -108162804 + Lx LINE L1 6393 6641 -13 9 1031 1129 307 96 17 chrX 58487563 58487751 -108162545 - Lx8 LINE L1 -1 7472 7284 9 1031 186 43 0 0 chrX 58487751 58487774 -108162522 + (TTTTG)n Simple_repeat Simple_repeat 5 27 0 9 1031 1129 307 96 17 chrX 58487774 58488119 -108162177 - Lx8 LINE L1 -190 7283 6898 9 1031 870 247 26 5 chrX 58488139 58488330 -108161966 - B3 SINE B2 0 216 22 9 1031 309 197 115 0 chrX 58488408 58488469 -108161827 + RSINE1 SINE B4 11 78 -87 9 1031 1204 309 33 18 chrX 58488554 58488953 -108161343 - Lx8 LINE L1 -616 6857 6453 9 1031 1000 293 75 7 chrX 58488954 58489320 -108160976 + MLT-int LTR MaLR 191 572 -1163 9 1031 381 22 0 0 chrX 58489452 58489498 -108160798 + (TG)n Simple_repeat Simple_repeat 1 46 0 9 1031 2332 277 54 5 chrX 58489498 58490161 -108160135 - Lx8 LINE L1 -356 7117 6422 9 1031 705 294 30 10 chrX 58490176 58490375 -108159921 - ID_B1 SINE B4 -17 207 5 9 1031 360 178 0 0 chrX 58490427 58490500 -108159796 + (TATG)n Simple_repeat Simple_repeat 2 74 0 9 1031 7988 32 8 0 chrX 58490741 58491705 -108158591 - L1Md_F3 LINE L1 0 6584 5613 9 1031 258 298 42 78 chrX 58491705 58491762 -108158534 - B3A SINE B2 -60 138 2 9 1031 476 200 0 0 chrX 58491762 58491847 -108158449 - B4A SINE B4 -206 86 2 9 1031 431 20 0 0 chrX 58491935 58491984 -108158312 - L1_Mm LINE L1 -212 5671 5623 9 1031 183 184 0 0 chrX 58492130 58492168 -108158128 + (CATATA)n Simple_repeat Simple_repeat 6 43 0 9 1031 2362 167 65 14 chrX 58492203 58492646 -108157650 - RMER15 LTR ERVL -109 466 1 9 1031 195 296 49 12 chrX 58492832 58492914 -108157382 + L3 LINE CR1 4210 4294 -195 9 1031 3213 206 53 26 chrX 58493061 58493824 -108156472 - RMER1B Other Other -25 1041 355 9 1031 29 47 0 0 chrX 58494031 58494074 -108156222 + AT_rich Low_complexity Low_complexity 1 43 0 9 1031 27 0 0 0 chrX 58494254 58494281 -108156015 + AT_rich Low_complexity Low_complexity 1 27 0 9 1031 621 316 7 0 chrX 58494448 58494603 -108155693 + Lx8 LINE L1 7137 7292 -181 9 1031 348 286 32 101 chrX 58494618 58494709 -108155587 + MT2B LTR ERVL 136 181 -420 9 1031 626 274 20 33 chrX 58494709 58494860 -108155436 + B1_Mur1 SINE Alu 1 149 0 9 1031 1129 91 23 0 chrX 58495137 58495312 -108154984 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 9 1031 1038 102 0 0 chrX 58495343 58495480 -108154816 - B1_Mus1 SINE Alu -9 139 3 9 1031 3894 46 4 14 chrX 58495489 58495992 -108154304 - L1Md_F2 LINE L1 0 6582 6085 9 1031 27 0 0 0 chrX 58496003 58496030 -108154266 + AT_rich Low_complexity Low_complexity 1 27 0 9 1031 3234 56 2 0 chrX 58496111 58496506 -108153790 - MTA_Mm LTR MaLR 0 396 1 9 1031 261 0 0 0 chrX 58496814 58496843 -108153453 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 1031 773 124 0 14 chrX 58496948 58497087 -108153209 + (TTTC)n Simple_repeat Simple_repeat 2 138 0 9 1031 240 360 0 29 chrX 58497908 58498011 -108152285 + Lx9 LINE L1 7088 7187 -457 9 1031 235 338 142 40 chrX 58499284 58499635 -108150661 + MARNA DNA Mariner 90 476 -110 9 1031 361 305 77 54 chrX 58499673 58499895 -108150401 - L2a LINE L2 0 3426 3200 9 1031 255 224 16 94 chrX 58500055 58500119 -108150177 + B1_Mus2 SINE Alu 1 59 -88 1 1031 234 0 0 158 chrX 58500120 58500234 -108150062 + (CAGAG)n Simple_repeat Simple_repeat 5 100 0 2 1031 644 151 9 0 chrX 58500237 58500343 -108149953 + B1_Mur2 SINE Alu 42 148 -1 3 1031 665 299 14 76 chrX 58500359 58500509 -108149787 + B4 SINE B4 92 233 -59 4 1031 188 34 0 33 chrX 58500509 58500539 -108149757 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 5 1031 665 299 14 76 chrX 58500539 58500598 -108149698 + B4 SINE B4 234 288 -4 4 1031 245 254 30 0 chrX 58501162 58501229 -108149067 + L1MEa LINE L1 399 467 -5603 6 1031 1328 275 11 57 chrX 58501652 58502018 -108148278 + MTE2a LTR MaLR 25 373 -6 7 1031 22 35 0 0 chrX 58502074 58502103 -108148193 + AT_rich Low_complexity Low_complexity 1 29 0 8 1031 336 233 8 16 chrX 58502250 58502372 -108147924 + CT-rich Low_complexity Low_complexity 6 126 0 9 1031 716 223 108 54 chrX 58502376 58502580 -108147716 - B3 SINE B2 0 216 2 1 1031 322 305 0 12 chrX 58504545 58504557 -108145739 - ID4_ SINE ID 0 83 36 1 1031 324 234 0 15 chrX 58504557 58504622 -108145674 - tRNA-Ala-GCY_ tRNA tRNA -10 65 2 1 1031 36325 30 1 0 chrX 58505018 58512093 -108138203 - L1Md_T LINE L1 0 6585 1 1 1031 36295 31 1 0 chrX 58512382 58519652 -108130644 - L1Md_T LINE L1 0 6585 1 1 1031 384 292 42 125 chrX 58519905 58520025 -108130271 - B1F SINE Alu -2 125 16 1 1031 361 283 42 118 chrX 58520247 58520366 -108129930 + B1F SINE Alu 16 125 -2 1 1031 198 0 0 0 chrX 58520415 58520437 -108129859 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1031 254 86 56 28 chrX 58520578 58520650 -108129646 + A-rich Low_complexity Low_complexity 2 75 0 1 1031 825 113 0 19 chrX 58520784 58520938 -108129358 + RMER17B LTR ERVK 313 463 -495 1 1031 1300 105 5 5 chrX 58520956 58521148 -108129148 + B2_Mm1a SINE B2 2 193 0 2 1031 978 15 23 15 chrX 58521227 58521359 -108128937 + (TTCTC)n Simple_repeat Simple_repeat 5 137 0 2 1031 6424 84 12 17 chrX 58521370 58522287 -108128009 - Lx3_Mus LINE L1 -18 6991 6080 2 1031 788 315 69 38 chrX 58522413 58522862 -108127434 - Lx9 LINE L1 -175 7469 7007 2 1031 1237 320 51 22 chrX 58522961 58523495 -108126801 - Lx9 LINE L1 -795 6849 6301 2 1031 21 0 0 0 chrX 58523856 58523877 -108126419 + AT_rich Low_complexity Low_complexity 1 21 0 2 1031 609 61 10 30 chrX 58524205 58524306 -108125990 + (TTCC)n Simple_repeat Simple_repeat 2 100 0 2 1031 315 191 0 0 chrX 58524312 58524375 -108125921 + CT-rich Low_complexity Low_complexity 2 64 0 2 1031 707 221 0 16 chrX 58524389 58524518 -108125778 - B1_Mur2 SINE Alu -21 128 2 2 1031 766 229 86 21 chrX 58524928 58525115 -108125181 - B3 SINE B2 -17 199 1 2 1031 348 293 44 13 chrX 58525402 58525561 -108124735 + L1M5 LINE L1 5630 5793 -447 2 1031 631 262 107 10 chrX 58525930 58526127 -108124169 + B3 SINE B2 1 216 0 3 1031 983 208 99 32 chrX 58526591 58526904 -108123392 - Lx7 LINE L1 0 7696 7363 3 1031 480 234 56 9 chrX 58527362 58527470 -108122826 + PB1D7 SINE Alu 4 116 -4 3 1031 537 250 40 0 chrX 58528210 58528334 -108121962 + RSINE1 SINE B4 1 129 -36 3 1031 180 0 0 0 chrX 58528357 58528377 -108121919 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 3 1031 1194 297 153 15 chrX 58528677 58529416 -108120880 + L1MC LINE L1 4454 5294 -852 3 1031 212 245 20 0 chrX 58529428 58529477 -108120819 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1031 379 278 6 52 chrX 58529485 58529602 -108120694 - B4A SINE B4 -9 283 170 3 1031 7409 60 13 6 chrX 58529909 58531422 -108118874 - L1Md_F2 LINE L1 -12 6570 5050 3 1031 365 251 125 25 chrX 58531525 58531725 -108118571 - L1_Mur3 LINE L1 0 5880 5661 3 1031 646 330 35 109 chrX 58533522 58533835 -108116461 - B4A SINE B4 0 292 3 4 1031 241 321 154 40 chrX 58534714 58534889 -108115407 - L2c LINE L2 -4 3383 3177 4 1031 597 306 112 9 chrX 58535026 58535250 -108115046 + LTR33A_ LTR ERVL 279 525 -6 4 1031 241 320 72 0 chrX 58535840 58535937 -108114359 + B1F SINE Alu 44 147 -2 4 1031 945 249 135 23 chrX 58536018 58536354 -108113942 - MLT1B LTR MaLR -3 387 14 4 1031 880 294 62 36 chrX 58536459 58537296 -108113000 - L1M2 LINE L1 -1643 4500 3616 4 1031 390 120 0 0 chrX 58537522 58537597 -108112699 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 4 1031 192 77 0 0 chrX 58537598 58537624 -108112672 + (TC)n Simple_repeat Simple_repeat 1 26 0 4 1031 2435 306 51 56 chrX 58537634 58538766 -108111530 - Lx8 LINE L1 -141 7332 6206 4 1031 294 95 0 0 chrX 58539608 58539650 -108110646 + (TTTA)n Simple_repeat Simple_repeat 4 45 0 4 1031 432 0 0 0 chrX 58540414 58540462 -108109834 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1031 688 175 6 6 chrX 58544100 58544261 -108106035 + GA-rich Low_complexity Low_complexity 2 162 0 5 1031 208 218 0 29 chrX 58544274 58544378 -108105918 + GA-rich Low_complexity Low_complexity 2 102 0 5 1031 761 244 19 39 chrX 58545723 58545928 -108104368 - B3 SINE B2 0 216 16 5 1031 364 282 53 35 chrX 58546294 58546408 -108103888 - PB1D10 SINE Alu -1 116 1 5 1031 192 293 16 120 chrX 58546915 58547093 -108103203 - MIRb SINE MIR -84 184 22 5 1031 642 293 27 36 chrX 58547095 58547318 -108102978 - ID_B1 SINE B4 -2 222 2 5 1031 307 267 100 0 chrX 58547515 58547605 -108102691 - PB1D9 SINE Alu 0 120 22 5 1031 3060 122 64 12 chrX 58547626 58548108 -108102188 + Lx2 LINE L1 6489 6995 -2 5 1031 32584 83 8 5 chrX 58548218 58554212 -108096084 - L1Md_F2 LINE L1 0 6582 577 5 1031 640 64 21 0 chrX 58554321 58554415 -108095881 + (TG)n Simple_repeat Simple_repeat 2 97 0 5 1031 444 292 45 98 chrX 58554511 58554735 -108095561 - MTEa LTR MaLR -7 372 161 6 1031 474 18 0 0 chrX 58554900 58554955 -108095341 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1031 297 75 0 0 chrX 58555125 58555165 -108095131 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 6 1031 186 43 0 0 chrX 58555165 58555188 -108095108 + (TTTCC)n Simple_repeat Simple_repeat 3 25 0 6 1031 405 0 0 0 chrX 58555191 58555236 -108095060 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1031 207 0 0 0 chrX 58555482 58555505 -108094791 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 1031 313 282 12 12 chrX 58555508 58555594 -108094702 - L1MEc LINE L1 -4532 2093 2008 6 1031 1007 244 0 37 chrX 58555613 58555830 -108094466 - B3 SINE B2 -6 210 2 6 1031 215 281 16 24 chrX 58555848 58555972 -108094324 + T-rich Low_complexity Low_complexity 3 125 0 6 1031 2036 191 17 43 chrX 58556164 58556680 -108093616 - Lx9 LINE L1 -1675 5969 5413 6 1031 297 246 29 0 chrX 58556688 58556757 -108093539 - tRNA-Gly-GGG tRNA tRNA -3 71 1 7 1031 519 238 250 0 chrX 58556771 58556812 -108093484 - B3 SINE B2 0 216 167 7 1031 279 122 0 0 chrX 58556812 58556861 -108093435 + (CATG)n Simple_repeat Simple_repeat 3 51 0 7 1031 519 238 250 0 chrX 58556861 58556991 -108093305 - B3 SINE B2 -50 166 3 7 1031 3015 239 71 5 chrX 58557072 58557874 -108092422 - Lx6 LINE L1 -8 7452 6598 7 1031 337 224 222 8 chrX 58557963 58558080 -108092216 - L1MC3 LINE L1 -983 6802 6661 7 1031 257 288 0 36 chrX 58558132 58558215 -108092081 - L1MEc LINE L1 -6428 119 40 6 1031 407 279 261 0 chrX 58558575 58558736 -108091560 - MER58C DNA MER1_type -12 203 1 7 1031 356 217 169 1 chrX 58558767 58558923 -108091373 - L1MEc LINE L1 -4480 1935 1725 7 1031 300 209 46 28 chrX 58559070 58559178 -108091118 - Lx9 LINE L1 -3 7641 7532 7 1031 270 0 0 0 chrX 58559186 58559216 -108091080 + (TA)n Simple_repeat Simple_repeat 1 30 0 7 1031 1239 213 124 41 chrX 58559280 58559692 -108090604 - Lx7 LINE L1 -4 7692 7247 7 1031 789 152 8 0 chrX 58559697 58559815 -108090481 + B1_Mur4 SINE Alu 3 121 -29 8 1031 283 214 10 101 chrX 58559735 58559834 -108090462 + RLTR25B LTR ERVK 441 530 -498 8 1031 6311 223 36 9 chrX 58559841 58561330 -108088966 - Lx7 LINE L1 -455 7241 5714 7 1031 1166 160 47 5 chrX 58561339 58561553 -108088743 - Lx7 LINE L1 -352 5528 5306 7 1031 303 95 0 0 chrX 58561559 58561601 -108088695 + Lx5 LINE L1 6377 6418 -632 8 1031 1684 171 82 84 chrX 58561598 58561658 -108088638 + Lx4B LINE L1 6613 6661 -397 8 1031 1108 102 0 0 chrX 58561658 58561805 -108088491 + B1_Mus2 SINE Alu 1 147 0 8 1031 1684 171 82 84 chrX 58561805 58562171 -108088125 + Lx4B LINE L1 6662 7038 -20 8 1031 387 0 0 0 chrX 58562171 58562214 -108088082 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 8 1031 8872 198 18 60 chrX 58562276 58566327 -108083969 - L1_Mus2 LINE L1 -1 6565 2704 8 1031 255 61 0 0 chrX 58566331 58566364 -108083932 + (TA)n Simple_repeat Simple_repeat 2 34 0 8 1031 7442 58 0 4 chrX 58566364 58567916 -108082380 - L1Md_F2 LINE L1 -28 6554 5009 8 1031 9102 118 11 26 chrX 58567907 58569987 -108080309 - L1_Mus2 LINE L1 -3178 2705 667 8 1031 180 0 0 0 chrX 58570029 58570049 -108080247 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 8 1031 1157 64 0 0 chrX 58570051 58570192 -108080104 - B1_Mm SINE Alu -6 141 1 9 1031 2049 211 14 8 chrX 58570192 58570689 -108079607 - Lx7 LINE L1 -587 5293 4794 7 1031 999 112 35 0 chrX 58570799 58570942 -108079354 - B1_Mus1 SINE Alu 0 148 1 9 1031 251 256 10 62 chrX 58571097 58571193 -108079103 + (TATATG)n Simple_repeat Simple_repeat 5 95 0 9 1031 284 229 49 0 chrX 58571207 58571268 -108079028 - B4A SINE B4 -228 64 1 9 1031 22 35 0 0 chrX 58571298 58571327 -108078969 + AT_rich Low_complexity Low_complexity 1 29 0 9 1031 521 298 159 17 chrX 58571451 58571871 -108078425 - L1MCc LINE L1 -4893 1530 1051 9 1031 398 367 70 62 chrX 58571936 58572177 -108078119 - L1MCc LINE L1 -5486 937 695 9 1031 381 195 24 94 chrX 58572194 58572364 -108077932 - Lx2 LINE L1 -1 6996 6839 9 1031 355 366 143 18 chrX 58572442 58572826 -108077470 - L1MCc LINE L1 -5892 531 100 9 1031 367 325 67 0 chrX 58572914 58573034 -108077262 + RSINE1 SINE B4 2 129 -36 9 1031 493 291 0 117 chrX 58573137 58573308 -108076988 + B3A SINE B2 48 198 0 9 1031 1322 256 72 64 chrX 58573327 58573539 -108076757 - L1_Mur3 LINE L1 -305 5575 5386 9 1031 243 0 0 0 chrX 58573539 58573566 -108076730 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 1031 1050 90 0 0 chrX 58573567 58573700 -108076596 - B1_Mm SINE Alu -12 135 3 1 1031 1322 256 72 64 chrX 58573700 58574124 -108076172 - L1_Mur3 LINE L1 -495 5385 4932 9 1031 1758 141 34 17 chrX 58574126 58574422 -108075874 - ORR1A2 LTR MaLR -24 303 3 1 1031 3940 186 7 24 chrX 58574422 58575173 -108075123 + Lx2B LINE L1 6258 6995 -5 1 1031 1217 225 42 13 chrX 58575204 58575510 -108074786 + Lx7 LINE L1 5590 5904 -1792 1 1031 263 270 87 0 chrX 58575857 58575983 -108074313 - L1M5 LINE L1 -354 5886 5750 1 1031 611 263 57 19 chrX 58576446 58576605 -108073691 + B3 SINE B2 18 182 -34 1 1031 348 367 53 5 chrX 58576634 58576842 -108073454 + L1M4 LINE L1 3517 3734 -2412 1 1031 335 333 8 0 chrX 58576937 58577066 -108073230 + L1M4 LINE L1 4270 4399 -1747 1 1031 336 330 97 0 chrX 58577198 58577383 -108072913 + MLT1B LTR MaLR 188 390 0 1 1031 269 245 71 0 chrX 58577383 58577481 -108072815 + L1MB8 LINE L1 3985 4089 -2057 1 1031 358 303 83 36 chrX 58577478 58577995 -108072301 + L1MB8 LINE L1 4888 5440 -738 1 1031 1694 102 0 38 chrX 58578039 58578303 -108071993 - Lx2 LINE L1 -286 6711 6458 1 1031 914 140 37 0 chrX 58578303 58578467 -108071829 + Lx2 LINE L1 6828 6997 0 1 1031 416 269 89 47 chrX 58578568 58578848 -108071448 + L1MB8 LINE L1 5441 5739 -440 1 1031 637 215 69 8 chrX 58579075 58579206 -108071090 + B1_Mur1 SINE Alu 1 139 -10 1 1031 284 0 28 0 chrX 58579207 58579243 -108071053 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 1 1031 249 240 152 2 chrX 58579358 58579542 -108070754 + L1MB8 LINE L1 5750 5966 -212 1 1031 296 273 34 11 chrX 58579584 58579673 -108070623 - ORR1E LTR MaLR -2 377 287 1 1031 502 328 148 8 chrX 58579834 58580077 -108070219 + RMER15 LTR ERVL 299 575 0 1 1031 527 338 90 27 chrX 58580128 58580350 -108069946 - ORR1E LTR MaLR -121 238 3 1 1031 227 233 44 0 chrX 58580399 58580489 -108069807 + L1MB8 LINE L1 6083 6176 -2 1 1031 4028 123 86 15 chrX 58581001 58581661 -108068635 + Lx LINE L1 5943 6649 -5 1 1031 36116 18 1 19 chrX 58581684 58586954 -108063342 + L1Md_A LINE L1 422 5586 -297 1 1031 8697 20 0 0 chrX 58586954 58587948 -108062348 + L1Md_A LINE L1 5587 6580 -2 1 1032 496 302 41 10 chrX 58589202 58589493 -108060803 + L1MDb LINE L1 1031 1330 -5079 1 1032 387 280 173 4 chrX 58589524 58589750 -108060546 + L1MDa LINE L1 17 280 -6353 1 1032 719 313 59 28 chrX 58589804 58590261 -108060035 + L1MD1 LINE L1 5547 6017 -225 1 1032 323 268 55 31 chrX 58590292 58590419 -108059877 + L1MD1 LINE L1 6104 6233 -9 1 1032 42 36 0 0 chrX 58590441 58590497 -108059799 + AT_rich Low_complexity Low_complexity 1 56 0 1 1032 8900 82 22 5 chrX 58590619 58592623 -108057673 + L1VL4 LINE L1 571 2608 -1306 1 1032 36278 29 0 0 chrX 58592621 58598986 -108051310 - L1Md_T LINE L1 0 6585 124 1 1032 1169 99 49 1 chrX 58598983 58599187 -108051109 + L1VL4 LINE L1 2593 2809 -3077 1 1032 26376 98 31 1 chrX 58599316 58604256 -108046040 + L1_Mus1 LINE L1 234 5321 -562 1 1032 8134 29 0 0 chrX 58604299 58605568 -108044728 - L1Md_T LINE L1 0 6582 5314 1 1032 6458 104 12 1 chrX 58605566 58606814 -108043482 + L1_Mus1 LINE L1 5306 6566 -1 1 1032 22 70 0 0 chrX 58606825 58606868 -108043428 + AT_rich Low_complexity Low_complexity 1 43 0 1 1032 830 286 157 26 chrX 58608192 58608504 -108041792 - MTEa LTR MaLR 0 379 27 1 1032 342 67 0 0 chrX 58608507 58608552 -108041744 + (TATG)n Simple_repeat Simple_repeat 1 45 0 1 1032 416 241 0 0 chrX 58608561 58608640 -108041656 - ID4_ SINE ID -2 81 3 1 1032 367 281 60 67 chrX 58608641 58608790 -108041506 - B1F1 SINE Alu -1 148 1 1 1032 242 395 57 9 chrX 58609120 58609332 -108040964 - L2c LINE L2 -14 3373 3152 1 1032 348 338 102 53 chrX 58609948 58610409 -108039887 - L1MC LINE L1 -841 5305 4826 1 1032 475 294 16 27 chrX 58610454 58610639 -108039657 - Lx5 LINE L1 -102 7358 7176 1 1032 2240 254 44 7 chrX 58610615 58611590 -108038706 - Lx5 LINE L1 -561 6899 5822 1 1032 937 294 98 57 chrX 58611592 58611693 -108038603 - RMER19C LTR ERVK -2 900 799 1 1032 4564 138 1 20 chrX 58611693 58612447 -108037849 + Lx2 LINE L1 6257 6996 -1 1 1032 1112 254 51 78 chrX 58612447 58613042 -108037254 - RMER19C LTR ERVK -104 798 4 1 1032 1577 195 0 7 chrX 58613053 58613347 -108036949 - Lx5 LINE L1 -68 5809 5518 1 1032 3359 171 26 45 chrX 58613344 58614031 -108036265 + Lx5 LINE L1 4848 5521 -356 1 1032 277 307 96 9 chrX 58614028 58614248 -108036048 - L1MC LINE L1 -1443 4703 4465 1 1032 757 187 7 7 chrX 58614284 58614424 -108035872 - B1_Mur2 SINE Alu 0 149 10 1 1032 909 319 25 58 chrX 58614424 58614608 -108035688 + ORR1E LTR MaLR 5 186 -173 1 1032 1140 67 0 0 chrX 58614608 58614758 -108035538 + (TA)n Simple_repeat Simple_repeat 2 151 0 1 1032 812 148 233 37 chrX 58614758 58614947 -108035349 + URR1A DNA MER1_type 1 226 0 1 1032 909 319 25 58 chrX 58614947 58615121 -108035175 + ORR1E LTR MaLR 187 351 -8 1 1032 310 264 56 34 chrX 58615155 58615380 -108034916 - L1MC LINE L1 -1749 4397 4177 1 1032 219 315 27 0 chrX 58615698 58615771 -108034525 - MIRb SINE MIR -62 206 132 1 1032 1620 179 118 6 chrX 58615815 58616130 -108034166 - ORR1B1 LTR MaLR -4 390 41 1 1032 1296 102 5 16 chrX 58617254 58617443 -108032853 + B2_Mm2 SINE B2 1 187 -8 1 1032 186 103 0 0 chrX 58617602 58617631 -108032665 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 1032 209 394 141 46 chrX 58617633 58618093 -108032203 - L2 LINE L2 -353 3066 2563 1 1032 710 164 23 0 chrX 58619622 58619750 -108030546 - URR1A DNA MER1_type 0 226 96 1 1032 295 231 78 50 chrX 58619627 58619768 -108030528 + CYRA11_Mm Unknown Y-chromosome 176 320 -297 1 1032 241 322 92 0 chrX 58619976 58620063 -108030233 + L2a LINE L2 3300 3394 -32 1 1032 288 356 0 0 chrX 58620246 58620336 -108029960 - B1_Mur3 SINE Alu -58 91 2 1 1032 7944 47 11 2 chrX 58620995 58622174 -108028122 - L1Md_F2 LINE L1 0 6582 5396 1 1032 207 0 0 0 chrX 58622230 58622253 -108028043 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1 1032 648 111 0 27 chrX 58622256 58622367 -108027929 - Lx LINE L1 -7 6647 6540 1 1032 5789 123 11 19 chrX 58622367 58623916 -108026380 - L1VL4 LINE L1 -1818 1741 207 1 1032 4826 49 17 10 chrX 58624282 58624885 -108025411 - L1Md_F2 LINE L1 -7 6575 5969 1 1032 36 23 0 0 chrX 58626241 58626284 -108024012 + AT_rich Low_complexity Low_complexity 1 43 0 1 1032 262 297 16 0 chrX 58627908 58627972 -108022324 + polypyrimidine Low_complexity Low_complexity 1 65 0 1 1032 226 281 149 46 chrX 58628021 58628196 -108022100 - MER45R DNA Tip100 0 1581 1389 1 1032 530 245 48 0 chrX 58628211 58628399 -108021897 - MER45R DNA Tip100 -163 1418 1222 1 1032 253 328 0 0 chrX 58628452 58628516 -108021780 + ID4_ SINE ID 19 82 -1 1 1032 888 272 10 0 chrX 58628598 58628800 -108021496 - B3 SINE B2 -12 204 1 1 1032 266 232 41 21 chrX 58628800 58628897 -108021399 - MER45R DNA Tip100 -806 775 677 1 1032 4044 36 0 0 chrX 58628913 58629391 -108020905 - L1Md_A LINE L1 -3 6579 6102 1 1032 327 364 80 36 chrX 58629458 58629595 -108020701 + RSINE1 SINE B4 21 163 -2 1 1032 578 376 106 64 chrX 58629605 58630151 -108020145 - MER45R DNA Tip100 -971 610 42 1 1032 330 290 96 44 chrX 58630545 58630697 -108019599 + MIRc SINE MIR 20 181 -87 1 1032 265 360 0 0 chrX 58630729 58630804 -108019492 + ID4_ SINE ID 2 76 -7 1 1032 411 310 26 46 chrX 58630864 58631016 -108019280 + RSINE1 SINE B4 2 150 -15 1 1032 294 327 170 16 chrX 58631416 58631739 -108018557 - L2 LINE L2 -514 2905 2533 1 1032 752 168 27 7 chrX 58631787 58631937 -108018359 + URR1B DNA MER1_type 73 225 0 1 1032 344 309 127 0 chrX 58632661 58632826 -108017470 + MER117 DNA MER1_type 12 197 0 1 1032 684 295 101 54 chrX 58633210 58633486 -108016810 - B4 SINE B4 -1 291 3 1 1032 667 193 7 79 chrX 58633583 58633735 -108016561 - B1_Mur2 SINE Alu -6 143 3 1 1032 384 317 167 29 chrX 58633739 58634051 -108016245 - Tigger13a DNA MER2_type -146 625 271 1 1032 259 302 58 0 chrX 58634173 58634259 -108016037 + MIR SINE MIR 46 136 -126 1 1032 240 158 0 0 chrX 58634321 58634378 -108015918 + (TAA)n Simple_repeat Simple_repeat 2 58 0 1 1032 857 289 29 45 chrX 58634516 58634893 -108015403 - L1M3 LINE L1 -1077 5063 4693 1 1032 573 270 85 7 chrX 58635276 58635429 -108014867 + B3A SINE B2 12 176 -22 1 1032 8810 22 1 0 chrX 58635560 58636587 -108013709 - L1Md_A LINE L1 -1 6581 5584 1 1032 625 173 60 80 chrX 58636961 58637112 -108013184 + B1_Mur3 SINE Alu 1 148 -1 1 1032 335 340 25 25 chrX 58637166 58637329 -108012967 - MLT1C LTR MaLR -2 465 303 1 1032 2190 130 91 73 chrX 58637733 58637985 -108012311 + RLTR44B LTR ERVK 1 290 -159 1 1032 1203 107 0 0 chrX 58637985 58638163 -108012133 + (GAA)n Simple_repeat Simple_repeat 1 178 0 1 1032 2190 130 91 73 chrX 58638163 58638351 -108011945 + RLTR44B LTR ERVK 291 449 0 1 1032 437 238 112 30 chrX 58640710 58640844 -108009452 - B1_Mm SINE Alu -1 146 2 1 1032 23 0 0 0 chrX 58641138 58641161 -108009135 + AT_rich Low_complexity Low_complexity 1 23 0 1 1032 297 0 0 0 chrX 58641299 58641332 -108008964 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1032 546 227 27 0 chrX 58641512 58641622 -108008674 - B3 SINE B2 -92 124 12 1 1032 310 268 0 0 chrX 58643142 58643224 -108007072 + L1_Mur3 LINE L1 3741 3822 -2058 1 1032 635 324 32 32 chrX 58643254 58643633 -108006663 + Lx7 LINE L1 4841 5219 -628 1 1032 360 0 0 0 chrX 58643689 58643729 -108006567 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 1032 1094 273 109 30 chrX 58643857 58644285 -108006011 + Lx7 LINE L1 5274 5705 -142 1 1032 504 48 0 0 chrX 58644285 58644348 -108005948 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 1032 1094 232 164 29 chrX 58644348 58644486 -108005810 + Lx7 LINE L1 5706 5914 -1782 1 1032 310 283 15 98 chrX 58644975 58645108 -108005188 - MER87 LTR ERV1 -23 518 397 1 1032 1154 266 136 6 chrX 58645289 58645761 -108004535 + MT2A LTR ERVL 1 533 0 1 1032 294 69 0 49 chrX 58645833 58645894 -108004402 + (CAAAAA)n Simple_repeat Simple_repeat 2 59 0 1 1032 409 37 0 0 chrX 58646018 58646072 -108004224 + B1_Mus2 SINE Alu 94 147 0 1 1032 224 292 142 30 chrX 58646993 58647127 -108003169 + MIR SINE MIR 108 256 -6 1 1032 646 275 37 58 chrX 58647719 58647962 -108002334 - MER46C DNA MER2_type -21 317 80 1 1032 1638 138 16 122 chrX 58648079 58648318 -108001978 - RMER17C LTR ERVK -8 402 188 1 1032 991 59 23 23 chrX 58648318 58648491 -108001805 + (GAGAA)n Simple_repeat Simple_repeat 5 177 0 1 1032 1638 142 16 123 chrX 58648491 58648732 -108001564 - RMER17C LTR ERVK -559 399 20 1 1032 2280 127 160 18 chrX 58648737 58649356 -108000940 - RMER17C-int LTR ERVK 0 3238 2532 1 1032 518 112 45 0 chrX 58649379 58649468 -108000828 - RMER17C-int LTR ERVK -907 2331 2239 1 1032 1127 208 235 14 chrX 58649525 58649950 -108000346 - RMER17C-int LTR ERVK -1235 2003 1485 1 1032 239 239 0 0 chrX 58650488 58650534 -107999762 + polypurine Low_complexity Low_complexity 2 47 0 1 1032 1627 196 123 42 chrX 58650786 58651282 -107999014 - RMER17C-int LTR ERVK -2702 536 1 1 1032 904 179 66 10 chrX 58651290 58651488 -107998808 - RMER17C LTR ERVK -8 402 194 1 1032 2043 118 13 32 chrX 58651639 58651737 -107998559 + ORR1A2 LTR MaLR 1 100 -227 1 1032 2625 73 34 0 chrX 58651737 58652091 -107998205 - L1_Mus2 LINE L1 0 6566 6201 1 1032 2043 118 13 32 chrX 58652091 58652307 -107997989 + ORR1A2 LTR MaLR 101 309 -18 1 1032 926 283 44 17 chrX 58652342 58652653 -107997643 - MLT2D LTR ERVL -77 320 8 1 1032 1506 232 64 30 chrX 58653418 58653657 -107996639 + MTD LTR MaLR 1 240 -179 1 1032 198 0 0 0 chrX 58653657 58653679 -107996617 + (TTCC)n Simple_repeat Simple_repeat 4 25 0 1 1032 1506 232 64 30 chrX 58653679 58653843 -107996453 + MTD LTR MaLR 241 417 -2 1 1032 271 237 98 73 chrX 58655288 58655370 -107994926 + PB1D7 SINE Alu 19 102 -18 2 1032 221 307 76 38 chrX 58655370 58655393 -107994903 + ID_B1 SINE B4 100 208 -16 2 1032 826 295 31 31 chrX 58655395 58655689 -107994607 + Lx8 LINE L1 7179 7472 -1 2 1032 484 259 164 27 chrX 58655879 58656062 -107994234 - MER58A DNA MER1_type -15 209 2 2 1032 421 314 93 77 chrX 58657197 58657521 -107992775 - L2c LINE L2 -4 3383 3055 2 1032 7340 96 7 22 chrX 58657813 58659297 -107990999 - L1_Mus3 LINE L1 -9 6629 5163 2 1032 2241 150 0 5 chrX 58659293 58659681 -107990615 + L1_Mur2 LINE L1 3465 3850 -2027 2 1032 188 368 21 75 chrX 58659683 58659721 -107990575 + MIRc SINE MIR 62 98 -170 2 1032 2377 104 0 6 chrX 58659721 58660050 -107990246 + ORR1A2 LTR MaLR 1 327 0 2 1032 188 368 21 75 chrX 58660050 58660105 -107990191 + MIRc SINE MIR 99 150 -118 2 1032 350 344 99 54 chrX 58660160 58660780 -107989516 + L2a LINE L2 2619 3308 -118 2 1032 403 335 65 30 chrX 58662386 58662555 -107987741 + MTEa LTR MaLR 4 178 -201 2 1032 1637 227 37 30 chrX 58663770 58664151 -107986145 + ORR1D1 LTR MaLR 1 374 0 2 1032 701 228 0 0 chrX 58664643 58664766 -107985530 + RSINE1 SINE B4 12 134 -31 2 1032 513 0 0 0 chrX 58664769 58664826 -107985470 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 1032 1952 87 26 35 chrX 58666077 58666387 -107983909 + IAPLTR2b LTR ERVK 1 307 -20 2 1032 210 192 0 0 chrX 58666427 58666479 -107983817 + (TATATG)n Simple_repeat Simple_repeat 5 56 0 2 1032 513 298 78 39 chrX 58666479 58666685 -107983611 - ID_B1 SINE B4 -8 216 3 2 1032 370 229 23 0 chrX 58666867 58666998 -107983298 + (CATATA)n Simple_repeat Simple_repeat 3 136 0 2 1032 270 0 0 0 chrX 58667230 58667260 -107983036 + (CATA)n Simple_repeat Simple_repeat 2 31 0 2 1032 354 100 0 0 chrX 58668942 58669002 -107981294 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 1032 25 31 0 0 chrX 58669444 58669476 -107980820 + AT_rich Low_complexity Low_complexity 1 32 0 2 1032 2312 207 56 20 chrX 58669520 58670018 -107980278 - RMER5 LTR ERV1 0 534 19 2 1032 242 286 127 8 chrX 58670198 58670332 -107979964 - L1M5 LINE L1 -297 5876 5727 2 1032 453 342 0 12 chrX 58670961 58671121 -107979175 + MER5A1 DNA MER1_type 9 166 0 2 1032 1134 181 18 5 chrX 58671347 58671569 -107978727 - URR1B DNA MER1_type 0 225 1 2 1032 423 0 0 0 chrX 58671613 58671660 -107978636 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 1032 531 0 0 0 chrX 58671660 58671718 -107978578 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1032 406 229 20 40 chrX 58671718 58671818 -107978478 - B1_Mur4 SINE Alu -9 141 44 2 1032 383 100 14 0 chrX 58671900 58671970 -107978326 + (CA)n Simple_repeat Simple_repeat 2 72 0 2 1032 225 248 42 17 chrX 58673072 58673191 -107977105 + (TTATA)n Simple_repeat Simple_repeat 5 126 0 2 1032 251 311 89 0 chrX 58674370 58674460 -107975836 + PB1 SINE Alu 22 119 -8 2 1032 272 333 0 25 chrX 58674484 58674564 -107975732 + ID4 SINE ID 6 83 0 2 1032 4260 191 59 24 chrX 58674662 58675537 -107974759 - RMER13B LTR ERVK 0 908 3 2 1032 180 111 0 0 chrX 58676140 58676167 -107974129 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1032 298 237 53 0 chrX 58676308 58676384 -107973912 - ID2 SINE ID -2 81 2 2 1032 886 84 126 0 chrX 58676628 58676771 -107973525 + L1Md_F2 LINE L1 6421 6581 -1 2 1032 911 57 8 0 chrX 58677116 58677238 -107973058 + (TC)n Simple_repeat Simple_repeat 2 124 0 2 1032 469 271 34 8 chrX 58677238 58677357 -107972939 - B1_Mur1 SINE Alu -14 135 14 2 1032 611 201 111 11 chrX 58677435 58677564 -107972732 + Lx3C LINE L1 6776 6920 -56 2 1032 450 0 0 0 chrX 58677564 58677614 -107972682 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1032 611 201 111 11 chrX 58677614 58677665 -107972631 + Lx3C LINE L1 6921 6973 -3 2 1032 441 0 0 0 chrX 58677726 58677775 -107972521 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1032 277 321 12 0 chrX 58678055 58678136 -107972160 + MER5A1 DNA MER1_type 79 160 -6 2 1032 417 315 6 16 chrX 58678164 58678318 -107971978 - MER5A DNA MER1_type -16 150 2 2 1032 291 302 84 38 chrX 58678453 58678584 -107971712 + MER5B DNA MER1_type 42 178 0 2 1032 333 0 0 0 chrX 58680291 58680328 -107969968 + (TC)n Simple_repeat Simple_repeat 2 38 0 2 1032 396 0 0 0 chrX 58680328 58680371 -107969925 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1032 183 328 66 0 chrX 58681467 58681528 -107968768 + L2c LINE L2 3283 3347 -40 2 1032 545 324 96 37 chrX 58681617 58681941 -107968355 - LTR82B Low_complexity ERVL -37 793 451 2 1032 464 311 113 35 chrX 58682093 58682408 -107967888 - MTEa LTR MaLR 0 379 19 2 1032 281 311 0 13 chrX 58682626 58682701 -107967595 - ID4_ SINE ID 0 83 10 2 1032 1055 70 35 0 chrX 58682754 58682896 -107967400 + B1_Mus1 SINE Alu 1 147 -1 2 1032 610 336 72 37 chrX 58683109 58683408 -107966888 + MLT1A0 LTR MaLR 13 438 -29 2 1032 1219 317 161 20 chrX 58683428 58684069 -107966227 + MLT1A0-int LTR MaLR 6 736 -999 2 1032 4490 298 69 59 chrX 58684076 58686224 -107964072 + RMER15-int LTR ERVL 2805 4973 -26 2 1032 266 237 17 0 chrX 58686224 58686283 -107964013 + RMER15 LTR ERVL 1 60 -515 2 1032 1229 260 54 23 chrX 58686317 58686671 -107963625 + RMER15 LTR ERVL 210 574 -1 2 1032 465 203 45 18 chrX 58686671 58686764 -107963532 + MLT1A0-int LTR MaLR 1483 1544 -191 2 1032 230 317 50 84 chrX 58687031 58687092 -107963204 + MTEa LTR MaLR 201 262 -117 2 1032 225 0 0 0 chrX 58687092 58687117 -107963179 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 1032 230 317 50 84 chrX 58687117 58687234 -107963062 + MTEa LTR MaLR 263 372 -7 2 1032 576 292 32 21 chrX 58687224 58687413 -107962883 + MLT1A0-int LTR MaLR 1540 1730 -5 2 1032 1377 242 83 16 chrX 58687479 58687852 -107962444 + MTD LTR MaLR 22 419 0 2 1032 585 282 163 20 chrX 58687854 58688100 -107962196 + MLT1A0 LTR MaLR 77 357 -8 2 1032 214 333 75 55 chrX 58690333 58690479 -107959817 + MIRb SINE MIR 31 179 -89 2 1032 4029 96 9 14 chrX 58691000 58691570 -107958726 - RMER2 LTR ERV1 0 567 1 2 1032 544 276 53 53 chrX 58692612 58692746 -107957550 - Tigger2b DNA MER2_type -232 494 367 2 1032 1635 165 55 6 chrX 58692746 58693058 -107957238 - ORR1A2 LTR MaLR 0 327 1 2 1032 544 276 53 53 chrX 58693058 58693222 -107957074 - Tigger2b DNA MER2_type -360 366 196 2 1032 38401 7 0 1 chrX 58693234 58699026 -107951270 + L1Md_A LINE L1 1 5586 -297 2 1032 8916 6 0 0 chrX 58699026 58700022 -107950274 + L1Md_A LINE L1 5587 6582 0 2 1032 297 281 45 51 chrX 58700050 58700226 -107950070 - Tigger2b DNA MER2_type -548 178 4 2 1032 290 268 0 0 chrX 58700333 58700404 -107949892 + L1_Mur3 LINE L1 3741 3811 -2069 2 1032 7880 24 0 0 chrX 58700393 58701312 -107948984 + L1Md_T LINE L1 4668 5586 -297 2 1032 8503 29 0 0 chrX 58701312 58702377 -107947919 + L1Md_T LINE L1 5587 6582 0 2 1032 324 70 0 0 chrX 58702618 58702661 -107947635 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 1032 1577 210 54 28 chrX 58703012 58703365 -107946931 + ORR1D1 LTR MaLR 3 364 -10 2 1032 543 325 12 12 chrX 58705305 58705467 -107944829 + B4A SINE B4 129 290 -2 2 1032 247 316 37 37 chrX 58705724 58705806 -107944490 + MLT1J2 LTR MaLR 86 167 -281 2 1032 23 0 0 0 chrX 58705814 58705837 -107944459 + AT_rich Low_complexity Low_complexity 1 23 0 2 1032 3093 133 0 2 chrX 58705859 58706332 -107943964 - Lx LINE L1 -10 6644 6173 2 1032 1115 122 64 0 chrX 58706334 58706506 -107943790 + Lx LINE L1 6394 6576 -421 2 1032 1133 122 120 18 chrX 58706493 58706710 -107943586 + Lx LINE L1 6409 6647 -7 2 1032 467 286 23 31 chrX 58706729 58706859 -107943437 - MIRb SINE MIR -131 137 9 2 1032 28 29 0 0 chrX 58707159 58707194 -107943102 + AT_rich Low_complexity Low_complexity 1 35 0 2 1032 2246 55 0 0 chrX 58707194 58707468 -107942828 - L1_Mus1 LINE L1 -2 6565 6292 2 1032 419 318 318 27 chrX 58707804 58708106 -107942190 - MLT1B LTR MaLR 0 390 1 2 1032 485 314 106 72 chrX 58708523 58708760 -107941536 - MER21B LTR ERV1 -15 848 604 2 1032 744 304 114 69 chrX 58708808 58709033 -107941263 - MER21B LTR ERV1 -340 523 289 2 1032 4232 59 0 8 chrX 58709033 58709565 -107940731 - L1_Mus1 LINE L1 0 6567 6040 2 1032 744 304 114 69 chrX 58709565 58709717 -107940579 - MER21B LTR ERV1 -575 288 129 2 1032 232 234 73 59 chrX 58709793 58709861 -107940435 + L2b LINE L2 3288 3356 -19 2 1032 290 356 10 0 chrX 58711546 58711650 -107938646 - Lx8 LINE L1 -184 7289 7185 2 1032 575 320 47 16 chrX 58711657 58711911 -107938385 - Lx8 LINE L1 -459 7014 6753 2 1032 391 250 22 22 chrX 58711926 58712065 -107938231 + L1_Mur3 LINE L1 4137 4275 -1605 2 1032 378 286 30 30 chrX 58712068 58712169 -107938127 - B1F SINE Alu -21 128 28 2 1032 2430 291 65 44 chrX 58712211 58713234 -107937062 - Lx8 LINE L1 -792 6681 5638 2 1032 495 268 89 0 chrX 58713234 58713413 -107936883 + Lx8 LINE L1 5413 5607 -273 2 1032 383 365 39 10 chrX 58713467 58713672 -107936624 - HAL1b LINE L1 -546 1463 1253 2 1032 502 293 27 54 chrX 58714364 58714512 -107935784 + B1F SINE Alu 1 144 -5 2 1032 323 279 97 7 chrX 58714947 58715102 -107935194 - Tigger6b DNA MER2_type -51 1546 1378 2 1032 346 330 113 6 chrX 58715105 58715331 -107934965 - Tigger6b DNA MER2_type -1314 283 35 2 1032 1811 209 44 24 chrX 58715816 58716227 -107934069 + MTD LTR MaLR 1 419 0 2 1032 413 19 19 0 chrX 58716442 58716496 -107933800 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 2 1032 857 320 27 37 chrX 58716612 58717021 -107933275 - Lx7 LINE L1 -1106 6590 6186 2 1032 1060 201 117 17 chrX 58717021 58717389 -107932907 - MTD LTR MaLR -16 403 1 2 1032 3705 242 72 118 chrX 58717417 58719049 -107931247 - Lx7 LINE L1 -1539 6157 4636 2 1032 201 39 0 0 chrX 58719049 58719075 -107931221 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 1032 3705 234 77 137 chrX 58719075 58719684 -107930612 - Lx7 LINE L1 -1245 4635 4028 2 1 2430 122 118 3 chrX 58719786 58720319 -107929977 + Lx LINE L1 6025 6652 -2 2 1033 16420 76 8 3 chrX 58720723 58723612 -107926684 - L1Md_F2 LINE L1 -20 6562 3661 2 1033 1497 170 0 0 chrX 58723608 58723861 -107926435 - L1Md_F LINE L1 -5884 635 383 2 1033 1581 171 4 8 chrX 58723861 58724127 -107926169 - L1VL1 LINE L1 -6156 266 2 2 1033 3651 91 45 4 chrX 58724138 58724666 -107925630 - L1_Mus3 LINE L1 0 6638 6089 2 1033 339 58 3 0 chrX 58724666 58724713 -107925583 + L1_Mus3 LINE L1 5983 6030 -606 2 1033 228 273 39 0 chrX 58724903 58724980 -107925316 - L1M5 LINE L1 -679 5765 5686 2 1033 237 271 42 0 chrX 58725128 58725224 -107925072 - LTR90A LTR LTR -22 954 855 2 1033 864 328 26 9 chrX 58725519 58725947 -107924349 - L1MA6 LINE L1 -191 6109 5675 2 1033 360 0 0 0 chrX 58725948 58725988 -107924308 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 1033 1139 79 0 0 chrX 58725988 58726140 -107924156 - B2_Mm2 SINE B2 -42 153 2 2 1033 603 234 0 0 chrX 58726140 58726277 -107924019 - L1MA6 LINE L1 -618 5682 5546 2 1033 433 256 94 76 chrX 58726278 58726440 -107923856 - MTEb LTR MaLR 0 379 212 2 1033 347 249 199 5 chrX 58726604 58726790 -107923506 - L1MA6 LINE L1 -765 5547 5326 2 1033 467 259 0 9 chrX 58726804 58726917 -107923379 - B1_Mur4 SINE Alu -10 140 29 3 1033 1289 198 7 40 chrX 58727091 58727407 -107922889 + ORR1B2 LTR MaLR 1 287 -97 3 1033 725 144 0 0 chrX 58727482 58727607 -107922689 + Lx2 LINE L1 6872 6996 -1 3 1033 3113 32 45 0 chrX 58727646 58728025 -107922271 - MTA_Mm LTR MaLR 0 396 1 3 1033 22 35 0 0 chrX 58728289 58728318 -107921978 + AT_rich Low_complexity Low_complexity 1 29 0 3 1033 221 54 81 0 chrX 58728488 58728525 -107921771 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 3 1033 273 340 41 0 chrX 58728914 58729011 -107921285 + LTR48 LTR ERV1 39 139 -648 3 1033 274 303 120 57 chrX 58729177 58729460 -107920836 + LTR48 LTR ERV1 443 743 -44 3 1033 203 0 37 0 chrX 58729926 58729953 -107920343 + (TCTA)n Simple_repeat Simple_repeat 4 31 0 3 1033 469 232 40 66 chrX 58729956 58730108 -107920188 - Lx9 LINE L1 -179 7465 7318 3 1033 1888 36 0 0 chrX 58730108 58730333 -107919963 - L1Md_T LINE L1 -2 6580 6356 3 1033 3185 42 0 0 chrX 58730333 58730713 -107919583 + L1Md_T LINE L1 5976 6355 -227 3 1033 214 373 184 0 chrX 58731886 58732098 -107918198 - MIRb SINE MIR -4 264 14 3 1033 7655 68 7 0 chrX 58732397 58733454 -107916842 - L1Md_F2 LINE L1 -10 6572 5509 3 1033 904 62 117 0 chrX 58733455 58733583 -107916713 + L1Md_F LINE L1 612 754 -5765 3 1033 504 379 57 0 chrX 58734799 58734976 -107915320 - Charlie17a DNA MER1_type -17 202 16 3 1033 201 74 0 0 chrX 58735397 58735424 -107914872 + (GAA)n Simple_repeat Simple_repeat 1 27 0 3 1033 510 83 0 0 chrX 58735805 58735877 -107914419 + (T)n Simple_repeat Simple_repeat 1 72 0 3 1033 238 366 30 7 chrX 58736392 58736527 -107913769 - MIR SINE MIR -85 177 40 3 1033 25 0 0 0 chrX 58736527 58736552 -107913744 + AT_rich Low_complexity Low_complexity 1 25 0 3 1033 424 278 0 0 chrX 58736579 58736676 -107913620 - MER5A1 DNA MER1_type -1 165 69 3 1033 794 300 46 33 chrX 58736808 58737111 -107913185 + MLT1A0 LTR MaLR 59 365 0 3 1033 237 284 0 40 chrX 58737119 58737218 -107913078 + L1MC LINE L1 2450 2544 -3602 3 1033 409 279 7 65 chrX 58737762 58737900 -107912396 - RMER10B LTR ERVL 0 398 269 3 1033 1813 211 13 24 chrX 58738466 58738918 -107911378 + L1_Mur3 LINE L1 2661 3107 -2773 3 1033 256 327 50 50 chrX 58739233 58739352 -107910944 + MIR3 SINE MIR 15 133 -75 3 1033 338 309 0 0 chrX 58740352 58740433 -107909863 - ID4_ SINE ID 0 83 3 3 1033 252 336 88 24 chrX 58740442 58740567 -107909729 - ID_B1 SINE B4 -1 223 91 3 1033 1968 271 61 42 chrX 58740643 58741359 -107908937 + Lx5 LINE L1 6459 7038 -12 3 1033 635 100 0 20 chrX 58741361 58741463 -107908833 + (GAAA)n Simple_repeat Simple_repeat 1 100 0 3 1033 11198 95 28 68 chrX 58741618 58741773 -107908523 - RLTR22_Mur LTR ERVK 0 1848 1710 3 1033 1870 56 0 0 chrX 58741773 58742005 -107908291 - L1_Mus1 LINE L1 -1 6566 6335 3 1033 11198 95 28 68 chrX 58742005 58742283 -107908013 - RLTR22_Mur LTR ERVK -139 1709 1461 3 1033 6576 97 21 8 chrX 58742283 58743248 -107907048 - Lx3_Mus LINE L1 0 7009 6033 3 1033 11198 95 28 68 chrX 58743248 58743865 -107906431 - RLTR22_Mur LTR ERVK -388 1460 861 3 1033 3204 121 23 4 chrX 58743865 58744379 -107905917 - L1_Mus3 LINE L1 -6 6632 6109 3 1033 11198 95 28 68 chrX 58744379 58745250 -107905046 - RLTR22_Mur LTR ERVK -988 860 3 3 1033 397 297 114 19 chrX 58746208 58746366 -107903930 + Lx8 LINE L1 7152 7324 -149 3 1033 24 53 0 0 chrX 58746423 58746461 -107903835 + AT_rich Low_complexity Low_complexity 1 38 0 3 1033 31260 91 3 12 chrX 58746899 58751890 -107898406 + L1Md_F2 LINE L1 642 5585 -298 3 1033 7321 78 3 17 chrX 58751891 58752901 -107897395 + L1Md_F2 LINE L1 5587 6582 0 3 1033 259 295 29 24 chrX 58753124 58753294 -107897002 + L1_Mur3 LINE L1 3150 3320 -2560 3 1033 303 311 84 53 chrX 58755258 58755615 -107894681 - L1ME4a LINE L1 -125 5999 5632 3 1033 258 259 108 24 chrX 58755630 58755713 -107894583 - MTEa LTR MaLR 0 379 290 3 1033 25 0 0 0 chrX 58755840 58755865 -107894431 + AT_rich Low_complexity Low_complexity 1 25 0 3 1033 1086 197 34 5 chrX 58756601 58756810 -107893486 - URR1B DNA MER1_type -9 216 2 3 1033 1784 184 69 29 chrX 58756939 58757391 -107892905 - Lx2B LINE L1 -3 6997 6528 3 1033 282 70 34 34 chrX 58757840 58757899 -107892397 + (TTTTTA)n Simple_repeat Simple_repeat 2 60 0 3 1033 4061 299 60 83 chrX 58758357 58759391 -107890905 + Tigger7 DNA MER2_type 72 1046 -1445 3 1033 1511 36 15 0 chrX 58759391 58759586 -107890710 + L1Md_F3 LINE L1 6384 6581 -3 3 1033 4061 299 60 83 chrX 58759586 58760472 -107889824 + Tigger7 DNA MER2_type 1047 1948 -543 3 1033 307 321 0 67 chrX 58760567 58760687 -107889609 - RMER20B LTR ERVK -137 490 379 3 1033 353 235 59 0 chrX 58760679 58760764 -107889532 - RMER20B LTR ERVK -537 90 1 3 1033 375 263 140 0 chrX 58760790 58760976 -107889320 - L1M4b LINE L1 -2399 4604 4393 3 1033 302 323 96 68 chrX 58761049 58761540 -107888756 + RMER20B LTR ERVK 1 510 -6 3 1033 270 239 119 38 chrX 58761819 58762054 -107888242 - L1M4b LINE L1 -2919 4084 3831 3 1033 309 309 39 54 chrX 58762099 58762229 -107888067 - L1MCa LINE L1 -4491 2017 1890 3 1033 288 0 0 0 chrX 58762236 58762268 -107888028 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1033 493 252 35 7 chrX 58762321 58762465 -107887831 - B1_Mur2 SINE Alu 0 149 2 3 1033 310 333 102 17 chrX 58762608 58763070 -107887226 - L1M4b LINE L1 -3517 3486 2986 3 1033 1083 99 0 0 chrX 58763275 58763417 -107886879 - B1_Mus1 SINE Alu -5 143 2 3 1033 446 346 155 31 chrX 58763434 58763956 -107886340 - L1M4b LINE L1 -6100 1234 648 3 1033 525 16 0 0 chrX 58764608 58764670 -107885626 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 1033 468 0 0 0 chrX 58764670 58764721 -107885575 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 1033 22 0 0 0 chrX 58764783 58764805 -107885491 + AT_rich Low_complexity Low_complexity 1 22 0 3 1033 880 130 135 6 chrX 58764884 58765054 -107885242 - B2_Mm2 SINE B2 -3 192 1 3 1033 192 225 163 33 chrX 58765563 58765655 -107884641 + MIR3 SINE MIR 66 169 -39 3 1033 490 312 139 29 chrX 58766547 58766857 -107883439 + MLT1J LTR MaLR 3 346 -166 3 1033 2342 331 58 19 chrX 58767321 58768453 -107881843 - Lx8 LINE L1 -1 7472 6297 3 1033 249 33 0 0 chrX 58768457 58768487 -107881809 + (CTA)n Simple_repeat Simple_repeat 1 30 0 3 1033 5838 152 29 23 chrX 58768496 58769593 -107880703 - Lx4A LINE L1 -36 7014 5885 3 1033 1281 78 17 0 chrX 58769593 58769772 -107880524 + B2_Mm1t SINE B2 4 185 -8 3 1033 5838 123 15 18 chrX 58769772 58769952 -107880344 - Lx4A LINE L1 -1174 5884 5709 3 1033 787 204 171 0 chrX 58770119 58770300 -107879996 - B3 SINE B2 -2 214 3 3 1033 279 0 0 0 chrX 58770462 58770493 -107879803 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1033 217 163 61 0 chrX 58771189 58771238 -107879058 + (TCTCTG)n Simple_repeat Simple_repeat 3 54 0 3 1033 234 0 0 0 chrX 58771978 58772004 -107878292 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 1033 555 16 0 0 chrX 58772004 58772067 -107878229 + (GA)n Simple_repeat Simple_repeat 1 64 0 3 1033 712 253 7 13 chrX 58772076 58772228 -107878068 - B3A SINE B2 -47 151 1 3 1033 230 294 83 14 chrX 58772228 58772332 -107877964 + RLTR3_Mm LTR ERVK 347 460 -868 3 1033 3474 148 38 1 chrX 58772432 58773122 -107877174 - Lx2B LINE L1 -722 6278 5555 3 1033 4235 182 55 49 chrX 58773122 58774005 -107876291 + RMER19B LTR ERVK 1 889 -13 3 1033 3119 73 5 0 chrX 58774014 58774412 -107875884 + MTB LTR MaLR 1 400 0 3 1033 1395 144 22 13 chrX 58774417 58774649 -107875647 - Lx2B LINE L1 -325 5558 5325 3 1033 3245 202 39 14 chrX 58774640 58775337 -107874959 + Lx2B LINE L1 6282 6995 -5 3 1033 1141 68 0 20 chrX 58775341 58775491 -107874805 + B1_Mus1 SINE Alu 1 147 -1 3 1033 486 0 0 0 chrX 58776775 58776829 -107873467 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 3 1033 2678 83 7 47 chrX 58776868 58777274 -107873022 - RLTR10 LTR ERVK 0 390 1 3 1033 6599 103 50 2 chrX 58777835 58778834 -107871462 - L1_Mus4 LINE L1 -3 6633 5587 3 1033 4569 181 18 2 chrX 58778846 58779694 -107870602 + L1_Mm LINE L1 4712 5572 -311 3 1033 822 76 23 0 chrX 58780712 58780844 -107869452 + (TC)n Simple_repeat Simple_repeat 2 136 0 3 1033 240 130 0 0 chrX 58780844 58780890 -107869406 + (T)n Simple_repeat Simple_repeat 1 46 0 3 1033 1152 57 0 0 chrX 58780898 58781038 -107869258 - B1_Mus1 SINE Alu -6 142 3 3 1033 551 328 103 0 chrX 58781065 58781327 -107868969 + B4 SINE B4 2 290 -2 3 1033 294 250 40 32 chrX 58781411 58781535 -107868761 + L1ME1 LINE L1 5216 5340 -806 3 1033 286 312 18 60 chrX 58781523 58781547 -107868749 + L1ME1 LINE L1 5865 5883 -296 3 1033 487 283 72 0 chrX 58781547 58781685 -107868611 + B1_Mus1 SINE Alu 1 148 0 3 1033 286 312 18 60 chrX 58781685 58781827 -107868469 + L1ME1 LINE L1 5884 6024 -155 3 1033 417 266 32 0 chrX 58782179 58782303 -107867993 - L1M3 LINE L1 -374 5815 5688 3 1033 233 235 86 0 chrX 58782645 58782726 -107867570 + L1MA8 LINE L1 6201 6288 -3 3 1033 2929 230 63 56 chrX 58782813 58783541 -107866755 - Lx5 LINE L1 0 7050 6318 3 1033 4233 185 34 16 chrX 58783543 58784774 -107865522 + Lx5 LINE L1 5068 6310 -740 3 1033 612 292 80 92 chrX 58785053 58785419 -107864877 - L1MC LINE L1 -354 5830 5459 3 1033 3686 51 0 2 chrX 58785419 58785873 -107864423 + L1Md_F2 LINE L1 6127 6579 -3 3 1033 612 279 77 98 chrX 58785873 58785986 -107864310 - L1MC LINE L1 -2327 5458 5365 3 1033 1164 48 14 0 chrX 58785986 58786131 -107864165 - B1_Mus1 SINE Alu 0 148 2 3 1033 612 261 168 38 chrX 58786131 58786806 -107863490 - L1MC LINE L1 -775 5371 4608 3 1033 725 257 108 95 chrX 58786987 58787610 -107862686 - L1MC LINE L1 -1877 4269 3639 3 1033 26 30 0 0 chrX 58787614 58787647 -107862649 + AT_rich Low_complexity Low_complexity 1 33 0 3 1033 207 0 0 0 chrX 58787751 58787774 -107862522 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1033 520 237 0 22 chrX 58787792 58787930 -107862366 - Lx9 LINE L1 -188 7456 7322 3 1033 510 254 150 15 chrX 58787999 58788259 -107862037 + L1MD LINE L1 4530 4824 -1322 3 1033 357 129 32 0 chrX 58788321 58788383 -107861913 + Lx9 LINE L1 7420 7483 -161 3 1033 6106 150 27 10 chrX 58788432 58788858 -107861438 + Lx4B LINE L1 4788 5228 -649 3 1033 351 0 0 0 chrX 58788858 58788897 -107861399 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 1033 6106 150 27 10 chrX 58788897 58789098 -107861198 + Lx4B LINE L1 5229 5437 -440 3 1033 1437 66 25 0 chrX 58789098 58789296 -107861000 + L1Md_A LINE L1 6378 6580 -2 3 1033 7576 155 34 14 chrX 58789296 58790116 -107860180 + Lx4B LINE L1 5438 6276 -782 3 1033 4081 38 0 16 chrX 58790116 58790621 -107859675 + L1Md_F3 LINE L1 6087 6583 -1 3 1033 7576 160 41 19 chrX 58790621 58791163 -107859133 + Lx4B LINE L1 6277 6839 -219 3 1033 3990 45 2 2 chrX 58791163 58791652 -107858644 + L1Md_F2 LINE L1 6082 6570 -12 3 1033 7576 169 72 18 chrX 58791652 58791872 -107858424 + Lx4B LINE L1 6764 7025 -33 3 1033 287 272 152 27 chrX 58791930 58792187 -107858109 + L1MD LINE L1 5101 5389 -757 3 1033 268 256 98 0 chrX 58792376 58792458 -107857838 - MLT1D LTR MaLR -78 427 338 3 1033 297 271 115 0 chrX 58792551 58792647 -107857649 - MLT1D LTR MaLR -396 109 3 3 1033 2705 191 20 16 chrX 58792983 58793538 -107856758 - Lx2B LINE L1 -5 6995 6439 4 1033 21 36 0 0 chrX 58794097 58794125 -107856171 + AT_rich Low_complexity Low_complexity 1 28 0 4 1033 3034 166 113 2 chrX 58794334 58794918 -107855378 - Lx LINE L1 -20 6634 5986 4 1033 2465 117 0 0 chrX 58794917 58795276 -107855020 + Lx LINE L1 5638 5996 -658 4 1033 12280 62 7 4 chrX 58795543 58797860 -107852436 - L1Md_F2 LINE L1 0 6582 4256 4 1033 683 257 31 36 chrX 58799333 58799523 -107850773 - B3 SINE B2 -10 185 2 4 1033 2304 94 6 17 chrX 58799701 58800048 -107850248 + L1_Mus4 LINE L1 6289 6631 -5 4 1033 1517 118 166 76 chrX 58801343 58801645 -107848651 - ORR1A4 LTR MaLR 0 329 1 4 1033 1145 58 0 0 chrX 58801706 58801845 -107848451 - B1_Mm SINE Alu -7 140 2 4 1033 23 0 0 0 chrX 58803028 58803051 -107847245 + AT_rich Low_complexity Low_complexity 1 23 0 4 1033 340 321 7 29 chrX 58803801 58803939 -107846357 + L2 LINE L2 1644 1778 -1641 4 1033 1334 77 15 5 chrX 58804097 58804293 -107846003 - L1_Mus2 LINE L1 -1 6565 6368 4 1033 1582 207 128 39 chrX 58805950 58806443 -107843853 - Lx9 LINE L1 -21 7623 7087 4 1033 715 145 17 0 chrX 58806440 58806557 -107843739 + Lx9 LINE L1 6789 6907 -737 4 1033 39100 31 1 6 chrX 58806555 58812732 -107837564 - L1Md_T LINE L1 -2 6580 438 4 1033 221 57 29 0 chrX 58812857 58812892 -107837404 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 4 1033 26 50 0 0 chrX 58813520 58813560 -107836736 + AT_rich Low_complexity Low_complexity 1 40 0 4 1033 223 328 85 8 chrX 58813723 58813852 -107836444 + MIRb SINE MIR 76 214 -54 4 1033 187 75 0 91 chrX 58814246 58814290 -107836006 + A-rich Low_complexity Low_complexity 5 44 0 4 1033 483 112 0 0 chrX 58814585 58814665 -107835631 + (TA)n Simple_repeat Simple_repeat 2 81 0 4 1033 563 217 6 0 chrX 58814924 58815081 -107835215 + GA-rich Low_complexity Low_complexity 2 159 0 4 1033 661 106 9 9 chrX 58815058 58815172 -107835124 + (GAAAA)n Simple_repeat Simple_repeat 4 117 0 4 1033 512 312 69 0 chrX 58815269 58815538 -107834758 - L1M4 LINE L1 -441 5743 5449 4 1033 628 332 65 9 chrX 58815590 58815821 -107834475 - MTD LTR MaLR -159 260 17 4 1033 34971 64 2 5 chrX 58815945 58819583 -107830713 - L1Md_F2 LINE L1 -13 6569 2944 4 1033 2790 70 13 15 chrX 58819583 58819972 -107830324 + RLTR10 LTR ERVK 1 388 -2 4 1033 34971 88 3 17 chrX 58819972 58822848 -107827448 - L1Md_F2 LINE L1 -2940 2943 108 4 1033 681 53 0 0 chrX 58824217 58824311 -107825985 + (CA)n Simple_repeat Simple_repeat 2 95 0 4 1033 21 0 0 0 chrX 58824596 58824617 -107825679 + AT_rich Low_complexity Low_complexity 1 21 0 4 1033 396 0 0 0 chrX 58824918 58824962 -107825334 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1033 263 313 105 13 chrX 58825717 58825869 -107824427 + MamRep1879 DNA hAT? 1 166 -50 4 1033 253 280 0 0 chrX 58826035 58826085 -107824211 - ID_B1 SINE B4 -21 203 154 4 1033 21 36 0 0 chrX 58826098 58826126 -107824170 + AT_rich Low_complexity Low_complexity 1 28 0 4 1033 725 342 30 42 chrX 58826632 58827038 -107823258 - Lx9 LINE L1 -189 7455 7055 4 1033 18646 91 6 6 chrX 58827063 58828383 -107821913 - L1_Mus1 LINE L1 -1 6566 5248 4 1033 351 0 0 0 chrX 58828383 58828422 -107821874 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 1033 18646 97 8 1 chrX 58828422 58830453 -107819843 - L1_Mus1 LINE L1 -636 5247 3198 4 1033 969 315 130 12 chrX 58830453 58830877 -107819419 - Lx8 LINE L1 -555 6918 6445 4 1033 1305 242 52 44 chrX 58830911 58831278 -107819018 - ORR1D1 LTR MaLR -4 370 1 4 1033 541 260 6 64 chrX 58831280 58831436 -107818860 - Lx9 LINE L1 -1097 6547 6401 4 1033 537 316 28 6 chrX 58831498 58831676 -107818620 - B3A SINE B2 -16 182 1 4 1033 333 68 0 0 chrX 58831751 58831795 -107818501 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1033 576 326 0 6 chrX 58831797 58831976 -107818320 - Lx9 LINE L1 -370 7274 7097 4 1033 450 0 0 0 chrX 58831980 58832030 -107818266 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1033 220 355 89 57 chrX 58832381 58832731 -107817565 - L3 LINE CR1 -2113 2376 2016 4 1033 885 137 71 6 chrX 58834190 58834359 -107815937 - URR1A DNA MER1_type -3 223 44 4 1033 345 18 34 34 chrX 58834922 58834981 -107815315 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 4 1033 220 229 0 0 chrX 58835844 58835892 -107814404 + (TAA)n Simple_repeat Simple_repeat 1 48 0 4 1033 2564 259 53 13 chrX 58836052 58836736 -107813560 + Lx7 LINE L1 6500 7210 -486 4 1033 1796 39 0 25 chrX 58836820 58837057 -107813239 + L1Md_F3 LINE L1 6353 6583 -1 4 1033 332 94 19 0 chrX 58837062 58837115 -107813181 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 1033 219 268 0 0 chrX 58837144 58837200 -107813096 + T-rich Low_complexity Low_complexity 1 56 0 4 1033 1419 76 5 0 chrX 58837239 58837424 -107812872 + B2_Mm1a SINE B2 2 187 -6 4 1033 220 136 45 0 chrX 58838291 58838335 -107811961 + (TATG)n Simple_repeat Simple_repeat 3 48 0 4 1033 236 279 101 0 chrX 58838577 58838656 -107811640 - ID_B1 SINE B4 -81 143 57 4 1033 21 0 0 0 chrX 58838803 58838824 -107811472 + AT_rich Low_complexity Low_complexity 1 21 0 4 1033 947 300 41 103 chrX 58838889 58839276 -107811020 + MTE2a LTR MaLR 6 368 -11 4 1033 494 329 17 34 chrX 58839635 58839814 -107810482 + MLT1C LTR MaLR 285 460 -7 4 1033 290 342 154 40 chrX 58839834 58840184 -107810112 + L2a LINE L2 2987 3376 -50 4 1033 7875 35 1 6 chrX 58840505 58841467 -107808829 + L1Md_F3 LINE L1 5614 6570 -14 4 1033 1784 295 68 22 chrX 58841494 58842174 -107808122 - Lx9 LINE L1 -576 7068 6358 4 1033 1124 111 0 8 chrX 58842195 58842464 -107807832 + (CA)n Simple_repeat Simple_repeat 1 266 0 4 1033 7052 99 91 6 chrX 58844154 58846004 -107804292 + L1VL2 LINE L1 12 2040 -1575 4 1033 5770 64 0 53 chrX 58846727 58847538 -107802758 + L1Md_F2 LINE L1 5802 6569 -13 4 1033 467 227 26 2 chrX 58847630 58847835 -107802461 - L1M2 LINE L1 -1464 4679 4449 4 1033 498 33 0 0 chrX 58847835 58847895 -107802401 + (TC)n Simple_repeat Simple_repeat 2 61 0 4 1033 1320 12 18 0 chrX 58847898 58848064 -107802232 + (TTTC)n Simple_repeat Simple_repeat 2 170 0 4 1033 1053 87 0 0 chrX 58848066 58848204 -107802092 - B1_Mus1 SINE Alu -10 138 1 4 1033 1233 296 37 23 chrX 58848220 58848738 -107801558 - L1_Rod LINE L1 -1405 4442 3918 4 1033 250 400 104 0 chrX 58848787 58848922 -107801374 - RSINE1 SINE B4 -2 163 15 4 1033 397 236 63 9 chrX 58848924 58849035 -107801261 + MTC LTR MaLR 10 126 -295 4 1033 7458 91 8 6 chrX 58849035 58850323 -107799973 - L1_Mus3 LINE L1 -17 6621 5331 4 1033 298 206 26 86 chrX 58850322 58850439 -107799857 - L1_Rod LINE L1 -1940 3907 3798 4 129 2735 272 51 28 chrX 58850466 58851601 -107798695 + Lx8 LINE L1 4918 6077 -1396 4 1034 479 225 20 9 chrX 58851658 58851775 -107798521 + Lx8 LINE L1 6285 6403 -1293 4 1034 517 338 133 3 chrX 58851770 58852079 -107798217 + Lx8 LINE L1 7002 7350 -123 4 1034 1005 73 7 0 chrX 58852372 58852508 -107797788 - B1_Mm SINE Alu -10 137 1 4 1034 417 295 71 71 chrX 58852530 58853026 -107797270 - L1M4 LINE L1 -426 5753 5258 4 1034 336 320 52 19 chrX 58853099 58853309 -107796987 - L1M4 LINE L1 -955 5191 4975 4 1034 235 305 38 0 chrX 58853450 58853581 -107796715 - Lx9 LINE L1 -3 7641 7506 4 1034 2232 292 74 34 chrX 58853588 58854466 -107795830 - Lx9 LINE L1 -370 7274 6362 4 1034 225 0 0 0 chrX 58854473 58854498 -107795798 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1034 1306 239 42 24 chrX 58854498 58854876 -107795420 + L1_Rod LINE L1 4744 5128 -719 4 1034 254 186 82 14 chrX 58855717 58855864 -107794432 + (TAGA)n Simple_repeat Simple_repeat 2 158 0 4 1034 513 47 0 0 chrX 58855925 58855989 -107794307 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 4 1034 212 195 89 8 chrX 58856028 58856152 -107794144 + (TCTA)n Simple_repeat Simple_repeat 3 136 0 4 1034 216 234 58 35 chrX 58856392 58856513 -107793783 + (TCTA)n Simple_repeat Simple_repeat 3 124 0 4 1034 387 0 0 0 chrX 58856513 58856556 -107793740 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 1034 216 234 58 35 chrX 58856556 58856607 -107793689 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 4 1034 656 40 40 0 chrX 58856800 58856900 -107793396 + (TCTA)n Simple_repeat Simple_repeat 1 104 0 4 1034 236 226 72 12 chrX 58857120 58857286 -107793010 + (TCTA)n Simple_repeat Simple_repeat 2 177 0 4 1034 257 208 72 26 chrX 58857379 58857532 -107792764 + (TCTA)n Simple_repeat Simple_repeat 3 162 0 4 1034 209 206 103 0 chrX 58857645 58857742 -107792554 + (TCTA)n Simple_repeat Simple_repeat 3 109 0 4 1034 217 216 67 43 chrX 58858058 58858222 -107792074 + (TCTA)n Simple_repeat Simple_repeat 3 170 0 4 1034 481 30 15 15 chrX 58858309 58858377 -107791919 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 4 1034 267 266 45 40 chrX 58858685 58858861 -107791435 + (TCTA)n Simple_repeat Simple_repeat 3 179 0 4 1034 225 185 93 0 chrX 58858892 58859000 -107791296 + (TCTA)n Simple_repeat Simple_repeat 1 118 0 4 1034 525 292 90 30 chrX 58859497 58859663 -107790633 - B3A SINE B2 -20 178 3 4 1034 285 268 49 118 chrX 58859911 58860097 -107790199 + L1_Rod LINE L1 5092 5245 -635 4 1034 542 338 10 0 chrX 58860108 58860309 -107789987 + B3 SINE B2 2 204 -12 4 1034 739 368 85 2 chrX 58860407 58860808 -107789488 - Lx8 LINE L1 -143 7330 6897 4 1034 27695 107 12 13 chrX 58860848 58865988 -107784308 - L1Md_F LINE L1 -788 5095 35 4 1034 252 77 0 0 chrX 58865995 58866034 -107784262 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1034 361 311 0 0 chrX 58866044 58866163 -107784133 - Lx8 LINE L1 -597 6876 6758 4 1034 360 281 32 16 chrX 58866161 58866284 -107784012 - L1_Rod LINE L1 -191 5656 5532 4 1034 896 199 95 24 chrX 58866747 58867010 -107783286 - MT2A LTR ERVL 0 533 84 4 1034 243 0 0 0 chrX 58867514 58867541 -107782755 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 4 1034 1049 73 0 0 chrX 58867542 58867678 -107782618 - B1_Mus1 SINE Alu -12 136 1 4 1034 397 169 0 0 chrX 58867902 58867967 -107782329 - MT2A LTR ERVL -468 65 1 4 1034 526 308 40 14 chrX 58868684 58868832 -107781464 + ETnERV2-int LTR ERVK 7070 7221 -185 4 1034 413 274 9 28 chrX 58869999 58870108 -107780188 - ID_B1 SINE B4 -18 206 100 4 1034 621 342 75 4 chrX 58870369 58870636 -107779660 + B4A SINE B4 1 286 -6 4 1034 486 182 0 0 chrX 58870655 58870765 -107779531 + (CA)n Simple_repeat Simple_repeat 1 110 0 4 1034 21 0 0 0 chrX 58870896 58870917 -107779379 + AT_rich Low_complexity Low_complexity 1 21 0 5 1034 333 265 87 13 chrX 58871045 58871194 -107779102 - L1MA4 LINE L1 -297 6003 5844 5 1034 946 260 75 50 chrX 58871214 58871615 -107778681 - Lx9 LINE L1 -9 7635 7225 5 1034 4291 190 30 35 chrX 58872419 58873324 -107776972 - Lx4B LINE L1 -126 6932 6033 5 1034 1613 240 218 21 chrX 58873894 58874363 -107775933 + Lx5 LINE L1 6468 7028 -22 5 1034 1263 220 45 31 chrX 58874363 58874715 -107775581 + RMER6A LTR ERVK 400 756 0 5 1034 1007 220 98 9 chrX 58875905 58876039 -107774257 + Lx9 LINE L1 7300 7458 -186 5 1034 420 82 0 0 chrX 58876039 58876100 -107774196 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 1034 1007 220 98 9 chrX 58876100 58876282 -107774014 + Lx9 LINE L1 7459 7644 0 5 1034 1623 215 26 12 chrX 58877259 58877603 -107772693 - Lx4B LINE L1 0 7058 6710 5 1034 6071 144 62 11 chrX 58877604 58878653 -107771643 + RLTR25A LTR ERVK 1 1103 0 5 1034 2406 129 51 8 chrX 58878653 58879045 -107771251 - Lx4B LINE L1 -344 6714 6306 5 1034 299 272 118 50 chrX 58879045 58879167 -107771129 - ID_B1 SINE B4 -83 209 8 5 1034 304 293 13 0 chrX 58879167 58879242 -107771054 - ID4 SINE ID 0 83 8 5 1034 269 250 0 0 chrX 58879336 58879384 -107770912 + MER33 DNA MER1_type 14 61 -263 5 1034 452 219 58 7 chrX 58879417 58879555 -107770741 + MER33 DNA MER1_type 159 303 -21 5 1034 1194 101 6 0 chrX 58879731 58879909 -107770387 + L1Md_F2 LINE L1 371 549 -6067 5 1034 26099 87 2 6 chrX 58879917 58883566 -107766730 + L1Md_F2 LINE L1 1951 5585 -298 5 1034 7581 69 1 9 chrX 58883567 58884565 -107765731 + L1Md_F2 LINE L1 5587 6576 -6 5 1034 3113 164 42 2 chrX 58887536 58888078 -107762218 + Lx5 LINE L1 6485 7048 -2 5 1034 281 342 0 0 chrX 58888511 58888584 -107761712 - ID4_ SINE ID -2 81 9 5 1034 462 36 0 0 chrX 58888666 58888722 -107761574 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 1034 507 346 19 44 chrX 58889161 58889321 -107760975 - B3A SINE B2 -42 156 1 5 1034 299 374 26 0 chrX 58889473 58889588 -107760708 - PB1D9 SINE Alu -1 119 2 5 1034 187 358 142 41 chrX 58890475 58890644 -107759652 - L2b LINE L2 -8 3367 3182 5 1034 180 77 0 0 chrX 58892082 58892108 -107758188 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 1034 404 328 8 8 chrX 58892108 58892240 -107758056 - B1_Mur2 SINE Alu -17 132 1 5 1034 650 325 71 6 chrX 58893085 58893429 -107756867 + L1M5 LINE L1 5419 5802 -322 5 1034 1102 276 41 63 chrX 58893538 58893932 -107756364 + MLT1B LTR MaLR 1 385 -5 5 1034 3319 36 5 0 chrX 58893932 58894325 -107755971 - MTA_Mm LTR MaLR 0 396 2 5 1034 271 297 0 139 chrX 58895674 58895811 -107754485 + L2c LINE L2 3254 3371 -16 5 1034 360 250 13 13 chrX 58896686 58896763 -107753533 + RMER20A LTR ERVK 438 514 -2 5 1034 300 102 0 0 chrX 58896826 58896875 -107753421 + (ATG)n Simple_repeat Simple_repeat 1 49 0 5 1034 1962 91 27 92 chrX 58896877 58896982 -107753314 + ORR1A2 LTR MaLR 13 92 -235 5 1034 1119 95 0 0 chrX 58896982 58897129 -107753167 - B1_Mus1 SINE Alu 0 148 2 5 1034 1962 91 27 92 chrX 58897129 58897351 -107752945 + ORR1A2 LTR MaLR 93 319 -8 5 1034 228 200 0 0 chrX 58897355 58897405 -107752891 + (ATG)n Simple_repeat Simple_repeat 2 51 0 5 1034 380 226 2 47 chrX 58897406 58897509 -107752787 - B1_Mur2 SINE Alu 0 149 54 5 1034 238 259 58 58 chrX 58897755 58897841 -107752455 + PB1D10 SINE Alu 32 117 0 5 1034 254 122 19 58 chrX 58897790 58897842 -107752454 + ID_B1 SINE B4 175 224 0 5 1034 355 343 0 11 chrX 58898440 58898614 -107751682 - L1M2 LINE L1 -942 5201 5030 5 1034 999 301 66 35 chrX 58898610 58899064 -107751232 + L1_Rod LINE L1 5287 5754 -93 5 1034 5338 140 11 7 chrX 58899182 58900007 -107750289 + Lx3B LINE L1 6106 6933 -40 5 1034 42 57 0 0 chrX 58900007 58900077 -107750219 + AT_rich Low_complexity Low_complexity 1 70 0 5 1034 1587 134 194 7 chrX 58900337 58900454 -107749842 - Lx2 LINE L1 0 6997 6882 5 1034 207 0 0 0 chrX 58900454 58900477 -107749819 + (CCCA)n Simple_repeat Simple_repeat 3 25 0 5 1034 1587 134 194 7 chrX 58900477 58900668 -107749628 - Lx2 LINE L1 -116 6881 6632 5 1034 257 206 0 0 chrX 58900810 58900873 -107749423 + Lx7 LINE L1 7634 7696 0 5 1034 509 196 103 0 chrX 58901653 58901760 -107748536 - Lx6 LINE L1 -1016 6444 6327 5 1034 5952 220 35 20 chrX 58901800 58903029 -107747267 - Lx6 LINE L1 -2 7458 6212 5 1034 213 209 0 0 chrX 58903571 58903614 -107746682 + GA-rich Low_complexity Low_complexity 2 44 0 5 1034 329 292 79 21 chrX 58904388 58904528 -107745768 + MIRc SINE MIR 56 203 -65 5 1034 213 355 54 18 chrX 58905010 58905122 -107745174 + MIRc SINE MIR 43 158 -110 5 1034 276 73 0 0 chrX 58905266 58905283 -107745013 + (TA)n Simple_repeat Simple_repeat 2 18 0 5 1034 288 0 0 0 chrX 58905283 58905315 -107744981 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1034 276 73 0 0 chrX 58905315 58905338 -107744958 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 1034 252 0 0 0 chrX 58905338 58905366 -107744930 + (GA)n Simple_repeat Simple_repeat 2 29 0 5 1034 193 365 117 16 chrX 58906001 58906129 -107744167 + MIRc SINE MIR 15 155 -113 5 1034 759 249 44 0 chrX 58906325 58906506 -107743790 - MER20 DNA MER1_type -1 218 30 5 1034 191 338 42 14 chrX 58906945 58907017 -107743279 + L2a LINE L2 3311 3384 -42 5 1034 312 27 0 0 chrX 58907023 58907060 -107743236 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 5 1034 2391 136 12 17 chrX 58907068 58907473 -107742823 - Lx3B LINE L1 -3 6970 6568 5 1034 195 333 61 108 chrX 58908121 58908269 -107742027 + L2c LINE L2 3010 3150 -237 5 1034 1071 218 25 17 chrX 58908553 58908791 -107741505 - Lx9 LINE L1 -397 7247 7008 5 1034 731 266 5 42 chrX 58908793 58909005 -107741291 + Lx9 LINE L1 7261 7464 -180 5 1034 298 174 14 0 chrX 58909035 58909104 -107741192 + Lx9 LINE L1 7574 7643 -1 5 1034 354 213 39 8 chrX 58910476 58910604 -107739692 - L1M2 LINE L1 -1637 4506 4375 5 1034 749 133 104 0 chrX 58910609 58910744 -107739552 - ORR1A2-int LTR MaLR -1814 149 1 5 1034 2151 141 0 0 chrX 58910744 58911071 -107739225 - ORR1A2 LTR MaLR 0 327 1 5 1034 266 197 114 49 chrX 58911071 58911194 -107739102 - L1M2 LINE L1 -1813 4327 4197 5 1034 309 296 43 32 chrX 58911350 58911535 -107738761 + L1MA9 LINE L1 5877 6063 -249 5 1034 2233 98 3 58 chrX 58911614 58911772 -107738524 - ORR1A2 LTR MaLR 0 327 181 5 1034 1045 82 0 0 chrX 58911772 58911906 -107738390 + B1_Mm SINE Alu 2 135 -12 5 1034 329 0 24 0 chrX 58911909 58911950 -107738346 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 5 1034 2233 98 3 58 chrX 58911950 58912133 -107738163 - ORR1A2 LTR MaLR -147 180 1 5 1034 2401 155 29 33 chrX 58912154 58912640 -107737656 - ORR1A2-int LTR MaLR -762 1201 718 5 1034 351 196 44 149 chrX 58912599 58912713 -107737583 - MT2B LTR ERVL -314 287 186 5 1034 832 187 0 7 chrX 58912679 58912830 -107737466 - ORR1A2 LTR MaLR -196 150 1 5 1034 233 370 0 0 chrX 58912878 58912959 -107737337 - ID4 SINE ID 0 83 3 5 1034 5690 248 126 15 chrX 58913769 58913984 -107736312 - Lx7 LINE L1 -175 7521 7253 5 1034 234 128 0 0 chrX 58913984 58914023 -107736273 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1034 5690 219 68 13 chrX 58914023 58915219 -107735077 - Lx7 LINE L1 -246 7450 6187 5 1034 537 99 0 0 chrX 58915226 58915307 -107734989 + (TA)n Simple_repeat Simple_repeat 1 81 0 5 1034 241 243 0 39 chrX 58915309 58915386 -107734910 + (TATG)n Simple_repeat Simple_repeat 1 74 0 5 1034 892 268 10 5 chrX 58915404 58915603 -107734693 - Lx7 LINE L1 -434 7262 7063 5 1034 320 256 63 39 chrX 58915639 58915846 -107734450 - Lx7 LINE L1 -1493 6203 5992 5 1034 1319 235 47 9 chrX 58915838 58916156 -107734140 + Lx7 LINE L1 6935 7264 -432 5 1034 193 254 18 35 chrX 58916537 58916594 -107733702 - L2a LINE L2 0 3426 3371 5 1034 23 33 0 0 chrX 58917126 58917156 -107733140 + AT_rich Low_complexity Low_complexity 1 30 0 5 1034 350 121 0 57 chrX 58917156 58917226 -107733070 - Lx3A LINE L1 -6 6975 6910 5 1034 308 98 16 0 chrX 58917546 58917607 -107732689 + Lx LINE L1 6585 6646 -8 5 1034 227 135 0 0 chrX 58917608 58917645 -107732651 + Lx3B LINE L1 5287 5323 -554 5 1034 5482 86 39 9 chrX 58917643 58918452 -107731844 - Lx3_Mus LINE L1 -304 6705 5870 5 1034 261 0 0 0 chrX 58918459 58918488 -107731808 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 5 1034 3496 118 5 0 chrX 58918672 58919234 -107731062 + Lx3B LINE L1 5359 5923 -1058 5 1034 3708 131 2 4 chrX 58919244 58919803 -107730493 + Lx3B LINE L1 6093 6650 -323 5 1034 5863 41 22 1 chrX 58920136 58920873 -107729423 + L1Md_F3 LINE L1 5833 6584 0 5 1034 603 23 11 0 chrX 58920873 58920961 -107729335 + L1Md_F2 LINE L1 6473 6561 -21 5 1034 477 0 0 0 chrX 58920961 58921014 -107729282 + (TA)n Simple_repeat Simple_repeat 1 53 0 5 1034 1755 143 30 10 chrX 58921039 58921336 -107728960 - Lx3B LINE L1 -11 6962 6660 5 1034 4042 27 0 8 chrX 58921358 58921836 -107728460 - L1Md_F2 LINE L1 0 6582 6109 5 1034 27 49 0 0 chrX 58921997 58922038 -107728258 + AT_rich Low_complexity Low_complexity 1 41 0 5 1034 369 0 0 0 chrX 58922464 58922505 -107727791 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1034 330 67 0 0 chrX 58922505 58922549 -107727747 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 1034 22 0 0 0 chrX 58922777 58922799 -107727497 + AT_rich Low_complexity Low_complexity 1 22 0 5 1034 439 279 78 45 chrX 58923200 58923354 -107726942 + B3A SINE B2 39 197 -1 5 1034 1628 316 42 6 chrX 58923469 58924016 -107726280 + Lx8 LINE L1 6190 6756 -717 5 1034 432 0 0 0 chrX 58924160 58924208 -107726088 + (TAAA)n Simple_repeat Simple_repeat 3 50 0 5 1034 210 37 0 0 chrX 58924264 58924291 -107726005 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1034 3169 109 13 2 chrX 58925774 58926234 -107724062 + L1_Mur2 LINE L1 5413 5877 0 5 1034 7126 107 50 21 chrX 58927015 58928164 -107722132 + Lx3_Mus LINE L1 5820 7001 -8 5 1034 2794 229 16 70 chrX 58928191 58928947 -107721349 - Lx9 LINE L1 -624 7020 6306 5 1034 2005 204 19 0 chrX 58929079 58929457 -107720839 + Lx9 LINE L1 7073 7457 -187 5 1034 252 0 0 0 chrX 58929459 58929487 -107720809 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1034 440 204 18 9 chrX 58929492 58929606 -107720690 + Lx9 LINE L1 7527 7641 -3 5 1034 251 254 0 0 chrX 58929722 58929785 -107720511 + CT-rich Low_complexity Low_complexity 3 65 0 5 1034 225 341 153 35 chrX 58929963 58930224 -107720072 + L2 LINE L2 153 444 -2975 5 1034 233 188 0 0 chrX 58930224 58930240 -107720056 - Lx5 LINE L1 -1258 5792 5777 5 1034 3648 179 43 15 chrX 58930240 58930960 -107719336 - Lx4B LINE L1 -5 7053 6314 5 1034 233 188 0 0 chrX 58930960 58930991 -107719305 - Lx5 LINE L1 -1274 5776 5746 5 1034 250 283 0 0 chrX 58931241 58931301 -107718995 + CT-rich Low_complexity Low_complexity 2 61 0 6 1034 29 78 0 0 chrX 58931308 58931372 -107718924 + AT_rich Low_complexity Low_complexity 1 64 0 6 1034 708 107 0 0 chrX 58931443 58931555 -107718741 + (CA)n Simple_repeat Simple_repeat 2 113 0 6 1034 2334 190 14 2 chrX 58931590 58932006 -107718290 - MTC LTR MaLR 0 421 1 6 1034 231 414 56 32 chrX 58932197 58932574 -107717722 + L2 LINE L2 942 1327 -2092 5 1034 24 32 0 0 chrX 58932810 58932841 -107717455 + AT_rich Low_complexity Low_complexity 1 31 0 6 1034 275 287 78 69 chrX 58932843 58932959 -107717337 + Zaphod DNA Tip100 442 558 -3473 6 1034 311 129 10 162 chrX 58933063 58933267 -107717029 + (CAGGA)n Simple_repeat Simple_repeat 5 177 0 6 1034 248 135 40 105 chrX 58933343 58933467 -107716829 + (CAGGA)n Simple_repeat Simple_repeat 5 120 0 6 1034 196 76 0 168 chrX 58933623 58933718 -107716578 + (CAGGA)n Simple_repeat Simple_repeat 5 83 0 6 1034 273 41 0 139 chrX 58934311 58934397 -107715899 + (CAGGA)n Simple_repeat Simple_repeat 5 78 0 6 1034 1025 102 0 0 chrX 58934444 58934581 -107715715 + B1_Mus1 SINE Alu 3 139 -9 6 1034 207 0 0 0 chrX 58934581 58934604 -107715692 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1034 339 308 131 0 chrX 58934666 58934864 -107715432 + Zaphod DNA Tip100 3288 3511 -520 6 1034 384 314 27 67 chrX 58935112 58935188 -107715108 + B1F SINE Alu 6 77 -72 6 1034 2780 106 5 0 chrX 58935188 58935586 -107714710 + MTB LTR MaLR 1 400 0 6 1034 6812 94 24 70 chrX 58935586 58936735 -107713561 + MTB-int LTR MaLR 2 1098 0 6 1034 2687 108 8 10 chrX 58936735 58937136 -107713160 + MTB LTR MaLR 1 400 0 6 1034 384 314 27 67 chrX 58937136 58937207 -107713089 + B1F SINE Alu 78 147 -2 6 1034 26 50 0 0 chrX 58937401 58937441 -107712855 + AT_rich Low_complexity Low_complexity 1 40 0 6 1034 1745 221 57 30 chrX 58938077 58938479 -107711817 - MTC LTR MaLR -8 413 1 6 1034 25 75 0 0 chrX 58938738 58938791 -107711505 + AT_rich Low_complexity Low_complexity 1 53 0 6 1034 565 233 72 34 chrX 58938820 58939029 -107711267 - L1MA6 LINE L1 -65 6235 6019 6 1034 5411 132 16 12 chrX 58939029 58939919 -107710377 + RMER17A2 LTR ERVK 1 893 -13 6 1034 2248 237 126 30 chrX 58939993 58940619 -107709677 - Lx5 LINE L1 -3 7047 6362 6 1034 381 305 53 18 chrX 58940623 58940793 -107709503 - L1M4 LINE L1 -2974 3172 2997 6 1034 216 0 0 0 chrX 58940806 58940830 -107709466 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1034 1056 96 0 0 chrX 58940830 58940966 -107709330 - B1_Mm SINE Alu -10 137 2 6 1034 2129 113 0 84 chrX 58941641 58941998 -107708298 - ORR1A2 LTR MaLR 0 327 1 6 1034 10522 140 52 22 chrX 58941998 58943900 -107706396 - ORR1A2-int LTR MaLR 0 1963 5 6 1034 439 163 23 27 chrX 58943904 58944007 -107706289 - ORR1A2 LTR MaLR 0 384 257 6 1034 6773 57 2 4 chrX 58944007 58944847 -107705449 - L1_Mus1 LINE L1 -40 6527 5689 6 1034 1456 173 0 118 chrX 58944847 58945161 -107705135 - ORR1A2 LTR MaLR -34 293 17 6 1034 1771 21 0 0 chrX 58945254 58945443 -107704853 - B2_Mm1a SINE B2 -3 190 2 6 1034 278 244 12 0 chrX 58945480 58945562 -107704734 - Lx9 LINE L1 0 7644 7562 6 1034 437 287 106 66 chrX 58945745 58946061 -107704235 + MTEa LTR MaLR 33 375 -4 6 1034 1737 201 44 8 chrX 58946727 58947088 -107703208 - ORR1D1 LTR MaLR 0 374 1 6 1034 935 189 53 0 chrX 58947088 58947278 -107703018 - ORR1D1-int LTR MaLR 0 1370 1171 6 1034 25 51 0 0 chrX 58947307 58947346 -107702950 + AT_rich Low_complexity Low_complexity 1 39 0 6 1034 386 242 0 15 chrX 58947746 58947876 -107702420 + CT-rich Low_complexity Low_complexity 3 130 0 6 1034 21 71 0 0 chrX 58947955 58947997 -107702299 + AT_rich Low_complexity Low_complexity 1 42 0 6 1034 4077 127 5 14 chrX 58948361 58948388 -107701908 + Lx2B LINE L1 5272 5296 -590 6 1034 403 78 0 15 chrX 58948388 58948453 -107701843 + Lx LINE L1 6585 6648 -6 6 1034 4299 217 42 16 chrX 58948453 58950091 -107700205 + Lx2B LINE L1 5297 6990 -10 6 1034 286 316 151 25 chrX 58950091 58950250 -107700046 - MER21B LTR ERV1 -3 860 682 6 1034 1140 156 10 0 chrX 58950315 58950507 -107699789 + Lx2A1 LINE L1 6736 6929 -79 6 1034 7437 125 37 3 chrX 58950505 58952002 -107698294 - Lx2A1 LINE L1 -281 6727 5202 6 1034 564 290 71 34 chrX 58952020 58952259 -107698037 - MLT1B LTR MaLR -132 258 11 6 1034 3315 95 37 2 chrX 58952331 58952796 -107697500 + L1_Mus3 LINE L1 6152 6632 -6 6 1034 313 320 83 20 chrX 58952884 58953136 -107697160 - L1MC1 LINE L1 -279 6065 5798 6 1034 790 250 10 10 chrX 58953515 58953721 -107696575 - BGLII_B LTR ERVK -63 378 173 6 1034 4087 98 78 0 chrX 58953803 58954345 -107695951 - MT2B2 LTR ERVL 0 584 1 6 1034 8816 18 2 0 chrX 58954750 58956435 -107693861 - L1Md_T LINE L1 0 6582 4896 6 1034 1292 48 0 0 chrX 58956613 58956760 -107693536 - B1_Mus1 SINE Alu 0 148 2 6 1034 550 170 9 0 chrX 58956797 58956903 -107693393 + Lx3B LINE L1 6070 6176 -797 6 1034 1247 104 38 6 chrX 58956898 58957081 -107693215 + Lx3B LINE L1 6554 6742 -231 6 1034 5364 134 6 27 chrX 58957081 58957909 -107692387 + Lx3A LINE L1 6163 6973 -8 6 1034 220 49 73 0 chrX 58957913 58957954 -107692342 + (TAAAAA)n Simple_repeat Simple_repeat 4 47 0 6 1034 807 224 10 62 chrX 58958149 58958344 -107691952 + ORR1B2 LTR MaLR 1 185 -182 6 1034 211 297 0 45 chrX 58958489 58958556 -107691740 + G-rich Low_complexity Low_complexity 4 67 0 6 1034 309 26 0 0 chrX 58958776 58958814 -107691482 + (TTTAG)n Simple_repeat Simple_repeat 3 40 0 6 1034 276 0 68 0 chrX 58959753 58959797 -107690499 + (TTG)n Simple_repeat Simple_repeat 2 48 0 6 1034 1146 241 70 15 chrX 58959860 58960189 -107690107 - Lx8 LINE L1 -996 6477 6131 6 1034 347 314 71 59 chrX 58960964 58961218 -107689078 - L2 LINE L2 -474 2945 2689 6 1034 1228 249 45 23 chrX 58961479 58961833 -107688463 - Lx5 LINE L1 0 7050 6689 6 1034 2266 83 9 44 chrX 58962017 58962357 -107687939 + Lx LINE L1 6327 6654 0 6 1034 21 0 0 0 chrX 58964749 58964770 -107685526 + AT_rich Low_complexity Low_complexity 1 21 0 6 1034 5449 89 4 30 chrX 58965822 58966559 -107683737 - L1_Mus2 LINE L1 -4 6562 5845 6 1034 12270 114 6 47 chrX 58966560 58967344 -107682952 - L1Md_F LINE L1 -735 3082 2318 6 1034 1107 110 0 20 chrX 58967344 58967493 -107682803 + B1_Mus1 SINE Alu 3 148 0 6 1034 12270 147 22 58 chrX 58967493 58969594 -107680702 - L1Md_F LINE L1 -1500 2317 287 6 1034 416 316 87 68 chrX 58971391 58971598 -107678698 + B4A SINE B4 62 272 -20 6 1034 414 0 0 0 chrX 58971650 58971696 -107678600 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1034 9102 135 29 8 chrX 58971869 58974002 -107676294 - Lx2 LINE L1 0 6997 4814 6 1034 4910 160 202 21 chrX 58973990 58975092 -107675204 - Lx2 LINE L1 -1702 4184 2883 6 1034 768 266 82 52 chrX 58975096 58975497 -107674799 + RMER17C-int LTR ERVK 394 806 -2432 6 1034 275 91 91 0 chrX 58977503 58977547 -107672749 + RMER17C-int LTR ERVK 1298 1345 -1893 6 1034 2558 155 173 46 chrX 58977601 58978348 -107671948 + RMER17C-int LTR ERVK 1518 2359 -879 6 1034 3256 138 139 57 chrX 58978336 58978989 -107671307 + RMER17C-int LTR ERVK 2532 3238 0 6 1034 1269 144 88 229 chrX 58978989 58979466 -107670830 + RMER17C LTR ERVK 1 410 0 6 1034 5582 96 21 28 chrX 58979468 58979527 -107670769 - MusHAL1 LINE L1 -1814 898 855 6 1034 2845 54 33 0 chrX 58979527 58979862 -107670434 - ORR1A0 LTR MaLR 0 346 1 6 1034 5582 96 21 28 chrX 58979862 58980216 -107670080 - MusHAL1 LINE L1 -1858 854 500 6 1034 1035 0 0 0 chrX 58980216 58980331 -107669965 + (TTC)n Simple_repeat Simple_repeat 2 116 0 6 1034 5582 96 21 28 chrX 58980331 58980594 -107669702 - MusHAL1 LINE L1 -2213 499 221 6 1034 548 259 154 42 chrX 58980594 58980924 -107669372 - RLTR9A LTR ERVK -1 367 1 6 1034 5582 96 21 28 chrX 58980924 58981145 -107669151 - MusHAL1 LINE L1 -2492 220 7 6 1034 2248 133 57 62 chrX 58981145 58981547 -107668749 + RLTR9D LTR ERVK 1 400 -3 6 1034 4653 142 7 52 chrX 58981547 58982057 -107668239 - L1VL4 LINE L1 -5444 858 377 6 129 4730 61 2 14 chrX 58982057 58982626 -107667670 + LTRIS2 LTR ERV1 3 564 0 6 1035 4653 142 7 52 chrX 58982626 58982808 -107667488 - L1VL4 LINE L1 -5926 376 195 6 1035 2234 137 43 9 chrX 58983717 58984062 -107666234 - Lx LINE L1 -1 6653 6297 6 1035 247 100 25 0 chrX 58984212 58984252 -107666044 + B3A SINE B2 1 41 -157 6 1035 228 35 0 0 chrX 58984326 58984355 -107665941 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1035 447 19 0 0 chrX 58984355 58984406 -107665890 + (GA)n Simple_repeat Simple_repeat 2 53 0 6 1035 391 310 33 45 chrX 58984410 58984653 -107665643 - L1_Mur3 LINE L1 -1015 4865 4626 6 1035 424 193 114 0 chrX 58984760 58984874 -107665422 - Lx9 LINE L1 0 7644 7518 6 1035 231 36 0 0 chrX 58984879 58984907 -107665389 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1035 1253 227 46 74 chrX 58984954 58985256 -107665040 - L1_Rod LINE L1 -2092 3755 3475 6 1035 261 0 0 0 chrX 58985256 58985285 -107665011 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 1035 1253 227 46 74 chrX 58985285 58985482 -107664814 - L1_Rod LINE L1 -2373 3474 3271 6 1035 1883 188 56 35 chrX 58985862 58986237 -107664059 + ORR1C2 LTR MaLR 1 383 -1 6 1035 271 245 83 18 chrX 58988143 58988329 -107661967 - L1M4 LINE L1 -244 5930 5726 6 1035 808 307 51 83 chrX 58988763 58989254 -107661042 - L1M4 LINE L1 -860 5286 4812 6 1035 7721 64 0 11 chrX 58989334 58990428 -107659868 - L1Md_F2 LINE L1 -4 6578 5502 6 1035 304 276 99 7 chrX 58990426 58990568 -107659728 - L1M4 LINE L1 -1547 4599 4445 6 1035 225 65 0 0 chrX 58990674 58990705 -107659591 + (TC)n Simple_repeat Simple_repeat 1 31 0 6 1035 2256 164 0 8 chrX 58990705 58991074 -107659222 - RLTR17 LTR ERVK -325 367 2 6 1035 7193 198 50 47 chrX 58991075 58992895 -107657401 - RMER3D-int LTR ERVK 0 2842 1016 6 1035 275 186 0 17 chrX 58992952 58993012 -107657284 - RMER3D-int LTR ERVK -6340 1066 1008 6 1035 491 294 85 30 chrX 58993086 58993286 -107657010 - RMER3D-int LTR ERVK -2568 274 64 6 1035 5944 101 31 2 chrX 58993286 58994166 -107656130 - L1_Mur1 LINE L1 -2588 3298 2394 6 1035 7105 84 24 19 chrX 58994161 58994832 -107655464 + Lx3_Mus LINE L1 4858 5537 -349 6 1035 2402 124 209 21 chrX 58994832 58995268 -107655028 + MURVY-LTR LTR ERV1 2 519 0 6 1035 7105 84 24 19 chrX 58995268 58995446 -107654850 + Lx3_Mus LINE L1 5538 5720 -166 6 1035 3531 43 8 0 chrX 58995446 58995839 -107654457 + MTA_Mm LTR MaLR 1 396 0 6 1035 9045 66 3 1 chrX 58995839 58996935 -107653361 + MTA_Mm-int LTR MaLR 1 1098 0 6 1035 3655 30 2 0 chrX 58996935 58997330 -107652966 + MTA_Mm LTR MaLR 1 396 0 6 1035 7105 61 16 34 chrX 58997330 58997640 -107652656 + Lx3_Mus LINE L1 5718 6020 -989 6 1035 350 93 0 0 chrX 58997655 58997698 -107652598 - L1_Mur1 LINE L1 -346 5540 5498 6 1035 12806 57 1 1 chrX 58997707 59000000 -107650296 - L1Md_F3 LINE L1 -15 6569 4276 6 1035 362 43 0 0 chrX 59000000 59000046 -107650250 - L1_Mm LINE L1 -1608 4275 4230 1 1035 442 376 61 43 chrX 59000134 59000412 -107649884 - B4 SINE B4 -2 290 8 2 1035 1938 151 11 6 chrX 59000599 59000953 -107649343 + Lx3B LINE L1 5915 6270 -703 3 1035 1892 160 18 15 chrX 59000953 59001290 -107649006 + Lx3B LINE L1 6635 6972 -9 3 1035 1606 309 24 43 chrX 59001290 59002105 -107648191 + Lx5 LINE L1 6269 7034 -24 4 1035 382 291 95 50 chrX 59002954 59003175 -107647121 - L1MD LINE L1 -2302 3844 3614 5 1035 212 253 272 3 chrX 59003432 59003565 -107646731 - MIR SINE MIR -90 178 18 6 1035 4142 167 86 26 chrX 59004246 59004521 -107645775 - L1_Mus4 LINE L1 0 6566 6248 7 1035 189 0 0 0 chrX 59004521 59004542 -107645754 + (TG)n Simple_repeat Simple_repeat 1 21 0 8 1035 9906 133 12 4 chrX 59004542 59006716 -107643580 - L1_Mus4 LINE L1 -319 6247 4045 7 1035 3087 70 26 4 chrX 59006717 59007169 -107643127 - MT-int LTR MaLR -328 770 381 9 1035 2290 120 91 42 chrX 59007169 59007399 -107642897 - IAPLTR2_Mm LTR ERVK 0 475 221 1 1035 180 0 0 0 chrX 59007399 59007419 -107642877 + (GA)n Simple_repeat Simple_repeat 2 21 0 1 1035 2290 120 91 42 chrX 59007419 59007641 -107642655 - IAPLTR2_Mm LTR ERVK -255 220 2 1 1035 8456 30 14 1 chrX 59007641 59008684 -107641612 - IAPEz-int LTR ERVK 0 6481 5425 1 1035 1180 276 8 18 chrX 59008684 59009064 -107641232 - L1VL4 LINE L1 -5711 591 216 1 1035 2864 38 21 0 chrX 59009521 59009860 -107640436 - ORR1A0 LTR MaLR 0 346 1 1 1035 2350 175 19 5 chrX 59009860 59010291 -107640005 + Lx3B LINE L1 6534 6970 -3 1 1035 459 0 0 0 chrX 59010300 59010351 -107639945 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 1035 318 312 101 71 chrX 59010540 59010778 -107639518 - MLT1D LTR MaLR -260 245 1 1 1035 189 353 0 0 chrX 59010929 59010997 -107639299 + L2 LINE L2 354 421 -2998 1 1035 923 325 74 56 chrX 59010998 59011445 -107638851 + MLT2B4 LTR ERVL 24 478 -78 1 1035 425 66 16 0 chrX 59011467 59011528 -107638768 + (GA)n Simple_repeat Simple_repeat 1 62 0 1 1035 416 331 199 20 chrX 59011590 59012092 -107638204 + L2 LINE L2 815 1406 -2013 1 1035 376 368 19 0 chrX 59012122 59012228 -107638068 + B1F2 SINE Alu 7 114 -35 2 1035 290 380 48 24 chrX 59012228 59012246 -107638050 + B4 SINE B4 92 218 -74 2 1035 230 118 0 38 chrX 59012265 59012318 -107637978 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 2 1035 215 344 73 76 chrX 59012426 59012741 -107637555 + L2 LINE L2 1623 1936 -1483 1 1035 335 276 104 7 chrX 59012787 59012922 -107637374 + MLT1B LTR MaLR 42 189 -201 2 1035 239 398 11 0 chrX 59013168 59013256 -107637040 + MLT1B LTR MaLR 309 397 -213 2 1035 22 35 0 0 chrX 59013348 59013377 -107636919 + AT_rich Low_complexity Low_complexity 1 29 0 2 1035 259 184 0 0 chrX 59013715 59013753 -107636543 + URR1B DNA MER1_type 1 38 -187 2 1035 22 35 0 0 chrX 59014206 59014235 -107636061 + AT_rich Low_complexity Low_complexity 1 29 0 2 1035 482 390 77 46 chrX 59014435 59014851 -107635445 + LTR75 LTR ERVL 27 455 -107 2 1035 571 266 26 7 chrX 59016329 59016484 -107633812 - L1MC3 LINE L1 -502 7283 7126 2 1035 341 287 175 46 chrX 59016871 59017587 -107632709 - L1MC3 LINE L1 -21 7764 6957 2 1035 597 144 0 0 chrX 59017607 59017739 -107632557 + (TC)n Simple_repeat Simple_repeat 1 132 0 3 1035 290 315 135 0 chrX 59017739 59017850 -107632446 - RSINE1 SINE B4 -36 129 4 3 1035 459 0 0 0 chrX 59018033 59018084 -107632212 + (TCTA)n Simple_repeat Simple_repeat 2 52 0 3 1035 255 125 0 0 chrX 59018085 59018125 -107632171 + (CAT)n Simple_repeat Simple_repeat 1 40 0 3 1035 206 292 0 11 chrX 59018132 59018222 -107632074 + (TA)n Simple_repeat Simple_repeat 2 90 0 3 1035 6026 142 27 20 chrX 59018751 59019809 -107630487 - Lx LINE L1 -2 6652 5587 3 1035 5236 191 2 6 chrX 59019827 59020914 -107629382 - L1VL4 LINE L1 -691 5186 4105 3 1035 2967 24 0 0 chrX 59020914 59021251 -107629045 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1035 9032 21 3 0 chrX 59021251 59022327 -107627969 - IAPEz-int LTR ERVK 0 6481 5403 3 1035 19819 42 36 14 chrX 59022308 59024912 -107625384 - IAPEz-int LTR ERVK -3811 2670 8 3 1035 2967 24 0 0 chrX 59024912 59025249 -107625047 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1035 11736 185 12 60 chrX 59025249 59028412 -107621884 - L1VL4 LINE L1 -1767 4119 1115 3 1035 3785 181 19 1 chrX 59028412 59029091 -107621205 - Lx LINE L1 -6 6648 5958 3 1035 2351 155 69 2 chrX 59029104 59029187 -107621109 - Lx2A LINE L1 -925 6083 5972 3 1035 981 126 0 0 chrX 59029187 59029330 -107620966 - B1_Mus1 SINE Alu -5 143 1 4 1035 7531 162 9 9 chrX 59029330 59030943 -107619353 - Lx LINE L1 -683 5971 4362 3 1035 2058 169 12 2 chrX 59030940 59031344 -107618952 + L1_Mur2 LINE L1 3953 4360 -1517 4 1035 3182 147 49 4 chrX 59031342 59031894 -107618402 - L1VL2 LINE L1 -5511 824 248 4 1035 272 122 20 0 chrX 59031874 59031923 -107618373 + L1VL2 LINE L1 86 135 -6200 4 1035 230 357 157 13 chrX 59031917 59032076 -107618220 - Lx8 LINE L1 -193 7280 7099 4 1035 234 0 0 0 chrX 59032122 59032148 -107618148 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 4 1035 180 77 0 0 chrX 59032180 59032206 -107618090 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1035 1142 71 0 0 chrX 59032206 59032347 -107617949 - B1_Mus1 SINE Alu -7 141 1 4 1035 240 291 144 16 chrX 59032766 59032904 -107617392 - MIRb SINE MIR -108 160 2 4 1035 5531 125 106 16 chrX 59032966 59033899 -107616397 + Lx3A LINE L1 5965 6981 0 4 1035 696 223 78 39 chrX 59034305 59034459 -107615837 - RSINE1 SINE B4 0 165 6 4 1035 2799 216 12 3 chrX 59034463 59035053 -107615243 - Lx9 LINE L1 -703 6941 6347 5 1035 66 66 0 0 chrX 59035118 59035240 -107615056 + AT_rich Low_complexity Low_complexity 1 122 0 5 1035 244 206 32 0 chrX 59037054 59037117 -107613179 + A-rich Low_complexity Low_complexity 2 66 0 5 1035 3594 180 9 15 chrX 59037496 59038166 -107612130 - Lx2 LINE L1 0 6997 6332 5 1035 220 329 25 25 chrX 59038294 59038375 -107611921 - L2b LINE L2 -2 3373 3293 5 1035 207 0 0 0 chrX 59040163 59040186 -107610110 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1035 25 31 0 0 chrX 59042075 59042107 -107608189 + AT_rich Low_complexity Low_complexity 1 32 0 5 1035 393 345 153 26 chrX 59042564 59042871 -107607425 - L3 LINE CR1 -139 4350 4005 5 1035 22 0 0 0 chrX 59042906 59042928 -107607368 + AT_rich Low_complexity Low_complexity 1 22 0 5 1035 2709 196 36 28 chrX 59042966 59043107 -107607189 + L1_Mur1 LINE L1 5216 5358 -528 5 1035 6414 137 8 35 chrX 59043107 59044231 -107606065 + Lx3_Mus LINE L1 5916 7009 0 6 1035 2709 196 36 28 chrX 59044231 59044725 -107605571 + L1_Mur1 LINE L1 5359 5856 -30 5 1035 1814 128 16 19 chrX 59044724 59045089 -107605207 + Lx3B LINE L1 3248 3611 -2275 6 1035 20579 72 4 0 chrX 59045088 59048711 -107601585 - L1Md_F2 LINE L1 0 6582 2943 6 1035 935 111 0 0 chrX 59048702 59048846 -107601450 - L1_Mm LINE L1 -654 5229 5086 6 1035 4003 96 0 0 chrX 59048846 59049429 -107600867 + L1_Mm LINE L1 4485 5067 -816 6 1035 7214 134 36 4 chrX 59049427 59050879 -107599417 + Lx3B LINE L1 4656 6194 -779 6 1035 3096 68 5 5 chrX 59050879 59051275 -107599021 + MTA_Mm LTR MaLR 1 396 0 6 1035 7214 142 57 9 chrX 59051275 59052047 -107598249 + Lx3B LINE L1 6195 6973 0 6 1035 362 292 7 71 chrX 59052108 59052248 -107598048 + B1_Mur2 SINE Alu 1 131 -18 6 1035 321 230 0 0 chrX 59052259 59052359 -107597937 + (CA)n Simple_repeat Simple_repeat 1 100 0 6 1035 759 259 62 5 chrX 59053099 59053293 -107597003 + B3 SINE B2 2 206 -10 6 1035 23 0 0 0 chrX 59053425 59053448 -107596848 + AT_rich Low_complexity Low_complexity 1 23 0 6 1035 26 0 0 0 chrX 59054199 59054225 -107596071 + AT_rich Low_complexity Low_complexity 1 26 0 6 1035 221 364 273 2 chrX 59054487 59054935 -107595361 - L2a LINE L2 -6 3420 2857 7 1035 264 320 39 9 chrX 59055034 59055270 -107595026 - L1MA10 LINE L1 -17 6317 5914 7 1035 406 111 25 0 chrX 59055780 59055846 -107594450 + (TA)n Simple_repeat Simple_repeat 1 68 0 7 1035 423 0 0 0 chrX 59055846 59055893 -107594403 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1035 406 111 25 0 chrX 59055893 59055907 -107594389 + (TA)n Simple_repeat Simple_repeat 1 14 0 7 1035 38 75 0 0 chrX 59055909 59055989 -107594307 + AT_rich Low_complexity Low_complexity 1 80 0 7 1035 731 338 15 10 chrX 59056069 59056272 -107594024 - B4 SINE B4 -2 290 87 7 1035 3659 150 15 2 chrX 59056272 59056875 -107593421 - Lx LINE L1 -5 6649 6039 7 1035 5293 157 10 1 chrX 59056872 59057774 -107592522 - Lx2 LINE L1 0 6997 6088 7 1035 247 111 0 62 chrX 59057785 59057833 -107592463 - Lx2 LINE L1 -1054 5943 5899 7 1035 15363 173 19 81 chrX 59057831 59058996 -107591300 - L1VL4 LINE L1 -1224 4662 3488 7 1035 1316 62 11 0 chrX 59058996 59059174 -107591122 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 8 1035 15363 168 16 68 chrX 59059174 59062295 -107588001 - L1VL4 LINE L1 -2399 3487 621 7 1035 630 285 36 36 chrX 59062295 59062517 -107587779 - RLTR45 LTR ERVK 0 482 261 8 1035 1665 238 22 64 chrX 59062734 59063187 -107587109 - RNERVK23-int LTR ERVK -326 7080 6647 8 1035 1193 303 26 17 chrX 59063256 59063875 -107586421 - RNERVK23-int LTR ERVK -456 7761 7279 8 1035 335 162 39 51 chrX 59064563 59064641 -107585655 - RLTR6-int LTR ERV1 -1532 6246 6170 8 1035 484 278 14 7 chrX 59064575 59064720 -107585576 - RNERVK23-int LTR ERVK -1880 6337 6192 8 1035 3303 315 57 50 chrX 59065147 59067622 -107582674 - RNERVK23-int LTR ERVK -2510 5707 3212 8 1035 1946 103 61 17 chrX 59067622 59067918 -107582378 - RLTR27 LTR ERVK 0 309 1 8 1035 3303 311 58 57 chrX 59067918 59068217 -107582079 - RNERVK23-int LTR ERVK -5006 3211 3183 8 1035 668 194 0 0 chrX 59068223 59068347 -107581949 - RLTR45-int LTR ERVK -6552 692 569 8 1035 1409 271 64 23 chrX 59069254 59069767 -107580529 - RLTR45-int LTR ERVK -6710 534 1 8 1035 659 267 51 28 chrX 59069768 59069984 -107580312 - RLTR45 LTR ERVK -1 481 261 8 1035 310 271 109 29 chrX 59070367 59070504 -107579792 - L1MEc LINE L1 -2094 4225 4078 8 1035 1064 203 36 31 chrX 59070505 59070729 -107579567 - URR1A DNA MER1_type 0 226 2 8 1035 24 77 0 0 chrX 59070730 59070782 -107579514 + AT_rich Low_complexity Low_complexity 1 52 0 8 1035 325 300 27 0 chrX 59070799 59070949 -107579347 - L1MEc LINE L1 -2544 3775 3622 8 1035 25 65 0 0 chrX 59071011 59071057 -107579239 + AT_rich Low_complexity Low_complexity 1 46 0 8 1035 215 114 23 0 chrX 59071141 59071185 -107579111 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 8 1035 642 147 29 12 chrX 59071196 59071368 -107578928 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 8 1035 290 273 52 41 chrX 59071581 59071753 -107578543 - L1MEc LINE L1 -5644 756 583 8 1035 216 86 0 0 chrX 59072170 59072205 -107578091 + (TTG)n Simple_repeat Simple_repeat 2 36 0 9 1035 447 261 29 22 chrX 59072215 59072352 -107577944 - B1_Mur1 SINE Alu -10 139 2 9 1035 776 339 85 59 chrX 59072474 59073014 -107577282 + MER90a LTR ERV1 52 605 -9 9 1035 416 245 84 22 chrX 59073097 59073322 -107576974 - L1MA8 LINE L1 -36 6255 6017 9 1035 196 114 86 0 chrX 59073560 59073595 -107576701 - L3 LINE CR1 -4328 161 124 9 1035 689 102 0 9 chrX 59074026 59074135 -107576161 + (TCCC)n Simple_repeat Simple_repeat 4 111 0 9 1035 226 222 0 0 chrX 59074605 59074650 -107575646 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1035 1172 62 0 0 chrX 59074763 59074909 -107575387 - B1_Mm SINE Alu 0 147 2 9 1035 678 240 81 11 chrX 59075248 59075433 -107574863 + B3 SINE B2 4 201 -15 9 1035 240 292 124 13 chrX 59075711 59075852 -107574444 - MIR SINE MIR -103 165 3 9 1035 6713 8 0 0 chrX 59075860 59076609 -107573687 + L1Md_T LINE L1 5834 6582 0 1 1035 333 0 0 0 chrX 59077134 59077171 -107573125 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1035 234 0 0 0 chrX 59078080 59078106 -107572190 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 1035 276 127 62 18 chrX 59078173 59078285 -107572011 + (TA)n Simple_repeat Simple_repeat 1 117 0 1 1035 213 39 0 0 chrX 59078355 59078381 -107571915 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 1035 1190 214 303 44 chrX 59078431 59078781 -107571515 + RLTR20A LTR ERVK 1 450 -91 1 1035 558 109 0 0 chrX 59078781 59078873 -107571423 + (TG)n Simple_repeat Simple_repeat 2 93 0 1 1035 626 211 180 36 chrX 59078873 59078960 -107571336 + RLTR20A LTR ERVK 451 540 -1 1 1035 387 113 0 0 chrX 59078969 59079040 -107571256 + (CATA)n Simple_repeat Simple_repeat 2 72 0 1 1035 4222 109 26 12 chrX 59079123 59079764 -107570532 + L1_Mus3 LINE L1 5978 6627 -11 1 1035 507 96 0 0 chrX 59080000 59080083 -107570213 - Lx3_Mus LINE L1 0 7009 6927 1 1035 1431 281 85 31 chrX 59080097 59080638 -107569658 - Lx9 LINE L1 -475 7169 6600 1 1035 510 17 0 0 chrX 59080773 59080832 -107569464 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1035 1156 218 67 13 chrX 59080914 59081350 -107568946 - Lx9 LINE L1 -1541 6103 5606 1 1035 231 271 184 19 chrX 59082113 59082320 -107567976 + L5 LINE RTE 2019 2259 -6 1 1035 397 147 10 87 chrX 59085701 59085805 -107564491 - Lx9 LINE L1 -35 7609 7514 1 1035 1203 269 38 9 chrX 59085816 59086161 -107564135 - Lx9 LINE L1 -268 7376 7022 1 1035 2348 266 15 26 chrX 59086175 59086781 -107563515 + Lx9 LINE L1 6327 6925 -719 1 1035 1124 260 33 30 chrX 59087037 59087338 -107562958 + ORR1D2 LTR MaLR 35 336 -34 1 1035 327 266 104 21 chrX 59087344 59087440 -107562856 + MTE2b LTR MaLR 235 338 -41 1 1035 909 289 39 12 chrX 59087481 59087737 -107562559 - MTE2b LTR MaLR -113 266 4 1 1035 340 273 81 0 chrX 59088346 59088445 -107561851 - Charlie2b DNA MER1_type -894 1888 1782 1 1035 522 0 0 0 chrX 59089329 59089387 -107560909 + (TC)n Simple_repeat Simple_repeat 1 58 0 1 1035 231 301 80 80 chrX 59090030 59090142 -107560154 - RMER12 LTR ERVK -472 850 739 1 1035 408 269 62 76 chrX 59090143 59090435 -107559861 + L1MA4A LINE L1 5694 5998 -1475 1 1035 654 49 0 0 chrX 59091607 59091689 -107558607 + (TA)n Simple_repeat Simple_repeat 2 83 0 1 1035 241 274 27 27 chrX 59092646 59092721 -107557575 + RMER15 LTR ERVL 1 75 -500 1 1035 734 334 75 38 chrX 59092757 59093096 -107557200 + RMER15 LTR ERVL 188 531 -44 1 1035 252 0 0 0 chrX 59093096 59093124 -107557172 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 1035 734 334 75 38 chrX 59093124 59093157 -107557139 + RMER15 LTR ERVL 532 573 -2 1 1035 201 374 52 30 chrX 59093337 59093472 -107556824 - MER5B DNA MER1_type -1 177 40 1 1035 891 286 77 36 chrX 59093472 59093834 -107556462 + MTEb LTR MaLR 1 377 -2 1 1035 6954 141 21 23 chrX 59093911 59095932 -107554364 - L1_Mus4 LINE L1 -20 6616 4601 1 1035 590 178 47 0 chrX 59095931 59096038 -107554258 - Lx4A LINE L1 -228 6830 6719 1 1035 2359 256 66 2 chrX 59096901 59097507 -107552789 - Lx2B LINE L1 -14 6986 6342 1 1035 4156 164 52 7 chrX 59097504 59098310 -107551986 + L1_Mur2 LINE L1 4537 5378 -499 1 1035 8068 72 5 1 chrX 59098311 59099383 -107550913 + L1Md_F2 LINE L1 4510 5585 -298 1 1035 7702 61 6 0 chrX 59099384 59100373 -107549923 + L1Md_F2 LINE L1 5587 6581 -1 1 1035 1890 187 25 124 chrX 59100373 59100665 -107549631 - L1_Mur2 LINE L1 -4092 1785 1511 1 1035 1242 100 0 0 chrX 59100665 59100845 -107549451 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1035 1890 187 25 124 chrX 59100845 59100890 -107549406 - L1_Mur2 LINE L1 -4367 1510 1510 1 1035 1062 90 7 7 chrX 59100890 59101035 -107549261 - B1_Mus1 SINE Alu 0 148 4 1 1035 1890 175 49 40 chrX 59101035 59101611 -107548685 - L1_Mur2 LINE L1 -4367 1510 915 1 1035 389 338 73 6 chrX 59102417 59102581 -107547715 + HAL1 LINE L1 1404 1578 -929 1 1035 605 318 50 17 chrX 59102607 59102908 -107547388 - Lx9 LINE L1 -137 7507 7197 1 1035 2848 218 9 0 chrX 59103245 59103791 -107546505 + Lx5 LINE L1 6484 7034 -16 1 1035 300 27 0 0 chrX 59103791 59103828 -107546468 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 1 1035 706 333 30 83 chrX 59103872 59104268 -107546028 - MLT1D LTR MaLR -125 380 6 1 1035 22 70 0 0 chrX 59104749 59104792 -107545504 + AT_rich Low_complexity Low_complexity 1 43 0 1 1035 382 287 40 124 chrX 59104891 59105117 -107545179 - B3A SINE B2 -16 179 2 1 1035 29 60 0 0 chrX 59105169 59105219 -107545077 + AT_rich Low_complexity Low_complexity 1 50 0 1 1035 292 78 0 0 chrX 59105287 59105338 -107544958 - L1Md_T LINE L1 -1 6581 6531 1 1035 686 165 25 0 chrX 59105550 59105671 -107544625 + B1_Mus1 SINE Alu 25 148 0 1 1035 225 308 81 14 chrX 59105752 59105900 -107544396 - L1M LINE L1 -663 5637 5480 1 1035 299 157 0 0 chrX 59106124 59106175 -107544121 - L1M LINE L1 -882 5415 5365 1 1035 3091 96 24 4 chrX 59106175 59106627 -107543669 - RMER16 LTR ERVK -1 532 72 1 1035 16126 105 18 6 chrX 59106656 59109033 -107541263 - RMER16-int LTR ERVK -4 5402 2999 1 1035 531 0 0 0 chrX 59109034 59109093 -107541203 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 1035 6528 46 1 0 chrX 59109093 59109880 -107540416 - L1Md_F2 LINE L1 -23 6559 5772 1 1035 3923 107 5 0 chrX 59109880 59110462 -107539834 - RMER16-int LTR ERVK -2406 3000 2416 1 1035 5919 161 3 33 chrX 59110467 59111553 -107538743 - L1VL4 LINE L1 -15 5868 4816 1 1035 4812 114 25 11 chrX 59111553 59112300 -107537996 + L1_Mus4 LINE L1 5878 6635 -1 1 129 18866 169 20 72 chrX 59112300 59116778 -107533518 - L1VL4 LINE L1 -1068 4815 588 1 1036 784 228 34 24 chrX 59116796 59117003 -107533293 + RLTR40 LTR ERVK 106 314 -503 1 1036 285 118 0 0 chrX 59117003 59117054 -107533242 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1036 1320 206 42 91 chrX 59117193 59117578 -107532718 + ORR1C2 LTR MaLR 3 368 -16 1 1036 727 221 98 73 chrX 59117587 59117861 -107532435 + RLTR40 LTR ERVK 472 752 -65 1 1036 13169 32 1 3 chrX 59117862 59119811 -107530485 - L1Md_T LINE L1 -4 6578 4633 1 1036 3280 38 117 5 chrX 59119811 59120238 -107530058 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1036 13169 20 1 5 chrX 59120238 59120521 -107529775 - L1Md_T LINE L1 -1251 4632 4350 1 1036 2375 77 40 0 chrX 59120517 59120867 -107529429 + L1Md_A LINE L1 203 566 -6158 1 1036 11815 18 1 0 chrX 59120866 59122238 -107528058 + L1Md_T LINE L1 4212 5585 -298 1 1036 8178 43 2 0 chrX 59122239 59123233 -107527063 + L1Md_T LINE L1 5587 6582 0 1 1036 25375 60 18 5 chrX 59123258 59127294 -107523002 - L1Md_T LINE L1 -1524 4359 307 1 1036 395 297 45 17 chrX 59127310 59127488 -107522808 + L1MA6 LINE L1 5775 5957 -343 1 1036 446 304 22 121 chrX 59127497 59127811 -107522485 - Lx8 LINE L1 -4 7469 7187 1 1036 255 257 13 13 chrX 59127811 59127886 -107522410 + MTC LTR MaLR 1 75 -346 1 1036 244 333 0 12 chrX 59127907 59127992 -107522304 - Lx8 LINE L1 -360 7113 7030 1 1036 2643 64 9 0 chrX 59129295 59129638 -107520658 + L1Md_F2 LINE L1 6237 6582 0 1 1036 378 358 113 19 chrX 59130507 59130790 -107519506 - L2a LINE L2 -241 3185 2877 1 1036 524 295 0 0 chrX 59130852 59130957 -107519339 - PB1D7 SINE Alu -7 113 9 1 1036 342 0 0 0 chrX 59130963 59131001 -107519295 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 1036 452 288 184 43 chrX 59131001 59131068 -107519228 - ID SINE ID -141 83 15 1 1036 4037 124 0 0 chrX 59131123 59131705 -107518591 - MT2B2 LTR ERVL -2 582 1 1 1036 396 0 0 0 chrX 59131736 59131780 -107518516 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1036 216 277 18 98 chrX 59131853 59131965 -107518331 - L2a LINE L2 -890 2529 2427 1 1036 227 376 0 0 chrX 59132003 59132088 -107518208 + MIR SINE MIR 32 116 -146 1 1036 323 319 87 41 chrX 59132109 59132305 -107517991 - MLT1A0 LTR MaLR -58 307 103 1 1036 31 44 0 0 chrX 59132483 59132528 -107517768 + AT_rich Low_complexity Low_complexity 1 45 0 1 1036 180 0 0 0 chrX 59132613 59132633 -107517663 + (TAA)n Simple_repeat Simple_repeat 1 20 0 1 1036 341 336 69 44 chrX 59132955 59133114 -107517182 - B3 SINE B2 -27 189 27 1 1036 502 241 234 5 chrX 59133158 59133346 -107516950 - Lx3C LINE L1 -2 6974 6744 1 1036 866 267 8 21 chrX 59133371 59133666 -107516630 + L1VL4 LINE L1 800 1079 -5576 1 1036 3040 127 62 6 chrX 59133660 59133896 -107516400 + L1_Mur2 LINE L1 4385 4621 -1256 1 1036 480 89 0 0 chrX 59133896 59133975 -107516321 + (CAA)n Simple_repeat Simple_repeat 2 80 0 1 1036 3040 127 62 6 chrX 59133975 59134270 -107516026 + L1_Mur2 LINE L1 4622 4944 -933 1 1036 602 221 36 29 chrX 59134317 59134457 -107515839 - B1_Mur1 SINE Alu 0 149 9 1 1036 511 294 8 0 chrX 59134783 59134909 -107515387 + B3A SINE B2 64 190 -8 1 1036 237 33 0 0 chrX 59134919 59134949 -107515347 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1036 26 0 0 0 chrX 59135203 59135229 -107515067 + AT_rich Low_complexity Low_complexity 1 26 0 1 1036 25 0 0 0 chrX 59135447 59135472 -107514824 + AT_rich Low_complexity Low_complexity 1 25 0 1 1036 219 300 0 0 chrX 59135953 59136003 -107514293 - MIR3 SINE MIR -34 174 125 1 1036 601 304 126 11 chrX 59137262 59137531 -107512765 - Lx8 LINE L1 -5 7468 7169 1 1036 405 324 43 14 chrX 59137551 59137758 -107512538 - Lx8 LINE L1 -416 7057 6845 1 1036 227 287 71 32 chrX 59138016 59138142 -107512154 - L1M5 LINE L1 -406 5718 5588 1 1036 477 246 118 12 chrX 59138631 59138800 -107511496 - MER58A DNA MER1_type 0 224 38 1 1036 28630 106 17 5 chrX 59138957 59139883 -107510413 + L1_Mus2 LINE L1 478 1414 -4469 1 1036 441 0 0 0 chrX 59139883 59139932 -107510364 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1036 28630 120 12 4 chrX 59139932 59145040 -107505256 + L1_Mus2 LINE L1 1415 6566 0 1 1036 1481 160 48 18 chrX 59145043 59145374 -107504922 + MusHAL1 LINE L1 583 923 -1789 1 1036 332 303 0 0 chrX 59145518 59145607 -107504689 - PB1D10 SINE Alu -2 115 27 1 1036 22 35 0 0 chrX 59146476 59146505 -107503791 + AT_rich Low_complexity Low_complexity 1 29 0 1 1036 1288 258 72 6 chrX 59147009 59147356 -107502940 + ORR1D2 LTR MaLR 1 370 0 1 1036 473 301 0 84 chrX 59147369 59147536 -107502760 + ORR1D2 LTR MaLR 218 370 0 1 1036 1262 256 86 27 chrX 59147627 59147964 -107502332 + ORR1D2 LTR MaLR 5 361 -9 1 1036 781 291 5 0 chrX 59148003 59148199 -107502097 - B3 SINE B2 -13 203 7 1 1036 22 56 0 0 chrX 59148201 59148237 -107502059 + AT_rich Low_complexity Low_complexity 1 36 0 1 1036 534 359 54 25 chrX 59148797 59149077 -107501219 - B4A SINE B4 0 292 5 1 1036 1115 56 7 0 chrX 59149111 59149254 -107501042 + B1_Mus2 SINE Alu 1 144 -3 1 1036 441 189 55 11 chrX 59149362 59149453 -107500843 - B3 SINE B2 -117 99 5 1 1036 237 243 91 116 chrX 59149476 59149597 -107500699 - B3 SINE B2 -13 203 86 1 1036 1492 253 95 43 chrX 59149715 59150232 -107500064 - Lx8 LINE L1 -38 7435 6892 2 1036 7221 91 27 3 chrX 59151137 59152136 -107498160 + RLTR13D5 LTR ERVK 1 1023 0 2 1036 289 312 0 42 chrX 59153244 59153340 -107496956 + MER33 DNA MER1_type 1 107 -102 2 1036 377 311 68 5 chrX 59153418 59153625 -107496671 + MER33 DNA MER1_type 68 287 -37 2 1036 189 294 0 0 chrX 59153821 59153872 -107496424 + L2a LINE L2 3374 3424 -2 2 1036 1226 118 16 11 chrX 59153986 59154174 -107496122 - B2_Mm2 SINE B2 -6 189 1 2 1036 322 296 0 148 chrX 59155490 59155605 -107494691 + RSINE1 SINE B4 9 106 -59 2 1036 483 18 0 0 chrX 59155632 59155688 -107494608 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 1036 1481 335 108 23 chrX 59155772 59156210 -107494086 - Lx8 LINE L1 -803 6670 6202 2 1036 504 0 0 0 chrX 59156210 59156266 -107494030 + (TC)n Simple_repeat Simple_repeat 2 57 0 2 1036 1481 289 108 25 chrX 59156266 59156909 -107493387 - Lx8 LINE L1 -1272 6201 5468 2 1036 290 382 84 6 chrX 59157996 59158162 -107492134 - MLT1H LTR MaLR -363 186 8 2 1036 209 133 15 77 chrX 59158176 59158241 -107492055 + T-rich Low_complexity Low_complexity 1 61 0 2 1036 6713 207 68 13 chrX 59158249 59160617 -107489679 - Lx5 LINE L1 -1 7049 4548 2 1036 4316 158 36 23 chrX 59160612 59161515 -107488781 - Lx5 LINE L1 -2360 3517 2603 2 1036 1072 195 132 40 chrX 59161515 59161819 -107488477 + IAPEY3_LTR LTR ERVK 1 332 0 2 1036 1743 124 116 135 chrX 59161819 59162249 -107488047 + MMERVK10C-int LTR ERVK 1 422 -7159 2 1036 799 118 8 0 chrX 59162352 59162479 -107487817 + MMERVK10C-int LTR ERVK 708 835 -6746 2 1036 850 188 97 0 chrX 59162493 59162658 -107487638 + IAPEY3-int LTR ERVK 323 503 -4903 2 1036 261 270 49 20 chrX 59162781 59162883 -107487413 + IAPEY3-int LTR ERVK 1462 1566 -6015 2 1036 381 123 0 0 chrX 59162900 59162957 -107487339 + IAP-d-int LTR ERVK 447 503 -6039 2 1036 824 169 74 0 chrX 59162957 59163105 -107487191 + IAP-d-int LTR ERVK 5007 5165 -1377 2 1036 1672 123 57 26 chrX 59163143 59163470 -107486826 + IAPEY3-int LTR ERVK 6965 7338 -342 2 1036 854 206 7 5 chrX 59163472 59163667 -107486629 - IAPEY3_LTR LTR ERVK -114 271 15 2 1036 1147 165 70 12 chrX 59163694 59163951 -107486345 + IAPEz-int LTR ERVK 6210 6481 0 2 1036 1065 205 128 36 chrX 59163951 59164255 -107486041 + IAPEY3_LTR LTR ERVK 1 332 0 2 1036 2281 185 5 0 chrX 59164255 59164676 -107485620 - Lx5 LINE L1 -3269 2608 2186 2 1036 573 174 13 1 chrX 59164673 59164831 -107485465 - Lx5 LINE L1 -4332 1548 1381 2 1036 207 0 0 0 chrX 59164831 59164854 -107485442 + (TGG)n Simple_repeat Simple_repeat 2 24 0 2 1036 183 146 0 0 chrX 59164854 59164895 -107485401 + (TTTTTG)n Simple_repeat Simple_repeat 3 43 0 2 1036 1061 103 0 7 chrX 59164905 59165051 -107485245 - B1_Mm SINE Alu 0 147 3 2 1036 1092 171 41 4 chrX 59165051 59165275 -107485021 - Lx5 LINE L1 -4420 1457 1224 2 1036 194 0 0 37 chrX 59165275 59165302 -107484994 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 2 1036 1092 204 314 28 chrX 59165302 59165515 -107484781 - Lx5 LINE L1 -4654 1223 951 2 1036 9283 94 1 4 chrX 59165519 59167606 -107482690 - L1_Mus1 LINE L1 0 6567 4510 2 1036 243 88 0 0 chrX 59168310 59168344 -107481952 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 1036 302 238 0 0 chrX 59168747 59168810 -107481486 - MLT1I LTR MaLR -245 166 104 2 1036 284 368 105 0 chrX 59169320 59169491 -107480805 - MLT1F2 LTR MaLR -300 260 72 2 1036 186 167 0 0 chrX 59169512 59169548 -107480748 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 1036 836 329 42 67 chrX 59169571 59170010 -107480286 - MLT2B2 LTR ERVL -39 528 3 2 1036 31 26 0 0 chrX 59170218 59170256 -107480040 + AT_rich Low_complexity Low_complexity 1 38 0 2 1036 190 372 54 17 chrX 59172239 59172413 -107477883 + MIR SINE MIR 78 267 -1 2 1036 302 252 198 14 chrX 59172595 59172812 -107477484 - L1MA5 LINE L1 -6 6294 6038 2 1036 257 0 30 0 chrX 59173790 59173823 -107476473 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 1036 390 125 0 0 chrX 59174804 59174884 -107475412 + (TC)n Simple_repeat Simple_repeat 1 80 0 2 1036 369 0 0 0 chrX 59174884 59174925 -107475371 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1036 189 0 0 0 chrX 59175138 59175159 -107475137 + (CA)n Simple_repeat Simple_repeat 1 21 0 2 1036 24 32 0 0 chrX 59175173 59175204 -107475092 + AT_rich Low_complexity Low_complexity 1 31 0 2 1036 3846 232 58 44 chrX 59175465 59176819 -107473477 + Lx6 LINE L1 4881 6273 -1187 2 1036 1188 274 60 86 chrX 59176814 59177484 -107472812 + Lx6 LINE L1 6436 7434 -26 2 1036 490 278 129 16 chrX 59177609 59177803 -107472493 + MLT1D LTR MaLR 3 218 -287 2 1036 423 215 63 40 chrX 59177881 59178007 -107472289 - RCHARR1 DNA MER1_type -1 973 845 2 1036 1962 110 19 19 chrX 59178008 59178323 -107471973 - RMER17A LTR ERVK -3 748 434 2 1036 2669 35 3 0 chrX 59178323 59178640 -107471656 + L1Md_F2 LINE L1 5269 5586 -297 2 1036 7889 40 19 0 chrX 59178640 59179606 -107470690 + L1Md_F2 LINE L1 5587 6570 -12 2 1036 2460 97 9 57 chrX 59179607 59180096 -107470200 - RMER17A LTR ERVK -416 473 1 2 1036 527 352 16 22 chrX 59180110 59180293 -107470003 + B4 SINE B4 57 238 -54 2 1036 1203 213 59 55 chrX 59180297 59180719 -107469577 - RCHARR1 DNA MER1_type -151 823 400 2 1036 338 322 84 13 chrX 59180863 59181017 -107469279 + L1ME1 LINE L1 5938 6102 -77 2 1036 594 0 0 0 chrX 59181203 59181269 -107469027 + (TC)n Simple_repeat Simple_repeat 1 66 0 2 1036 340 316 28 17 chrX 59182943 59183120 -107467176 + L1MB7 LINE L1 5708 5886 -298 2 1036 204 216 0 0 chrX 59183424 59183475 -107466821 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1036 748 240 7 0 chrX 59183676 59183822 -107466474 - B1_Mur2 SINE Alu -2 147 1 2 1036 791 103 0 0 chrX 59184091 59184208 -107466088 - L1Md_F LINE L1 -5685 834 718 2 1036 4269 89 13 20 chrX 59184215 59184820 -107465476 + L1Md_F2 LINE L1 5979 6579 -3 2 1036 742 152 0 33 chrX 59185861 59186044 -107464252 + (TA)n Simple_repeat Simple_repeat 2 178 0 2 1036 239 221 14 14 chrX 59188663 59188755 -107461541 + (TA)n Simple_repeat Simple_repeat 1 92 0 2 1036 25 31 0 0 chrX 59188832 59188864 -107461432 + AT_rich Low_complexity Low_complexity 1 32 0 2 1036 786 128 0 0 chrX 59189181 59189306 -107460990 + B1_Mus2 SINE Alu 2 126 -21 2 1036 10585 113 41 20 chrX 59189441 59191795 -107458501 + L1Md_F2 LINE L1 387 2791 -3092 2 1036 2229 47 0 0 chrX 59191786 59192064 -107458232 + L1Md_F2 LINE L1 3863 4140 -1743 2 1036 963 9 0 0 chrX 59192065 59192172 -107458124 + U6 snRNA snRNA 1 107 0 2 1036 32980 4 0 0 chrX 59192172 59195910 -107454386 + L1Md_A LINE L1 1849 5586 -297 2 1036 8988 1 0 6 chrX 59195910 59196912 -107453384 + L1Md_A LINE L1 5587 6582 0 2 1036 9826 92 17 4 chrX 59196912 59198350 -107451946 + L1Md_F2 LINE L1 4129 5585 -298 2 1036 7065 99 2 8 chrX 59198351 59199350 -107450946 + L1Md_F2 LINE L1 5587 6579 -3 2 1036 369 152 0 4 chrX 59199869 59199932 -107450364 + L1Md_F3 LINE L1 6228 6285 -299 2 1036 25 0 0 0 chrX 59200424 59200449 -107449847 + AT_rich Low_complexity Low_complexity 1 25 0 2 1036 937 205 137 4 chrX 59201250 59201505 -107448791 - Lx7 LINE L1 -4 7692 7404 2 1036 1713 191 54 11 chrX 59201542 59201891 -107448405 - ORR1D1 LTR MaLR -8 366 3 2 1036 22 70 0 0 chrX 59203741 59203784 -107446512 + AT_rich Low_complexity Low_complexity 1 43 0 2 1036 334 311 84 18 chrX 59203956 59204123 -107446173 - MIRb SINE MIR -70 198 21 2 1036 25 31 0 0 chrX 59205021 59205053 -107445243 + AT_rich Low_complexity Low_complexity 1 32 0 2 1036 326 366 81 55 chrX 59206032 59206339 -107443957 - MLT1D LTR MaLR -126 379 65 2 1036 316 290 120 43 chrX 59207810 59208019 -107442277 + L1MD LINE L1 3025 3249 -2897 2 1036 2348 74 0 0 chrX 59208394 59208706 -107441590 - L1Md_A LINE L1 -1 6581 6270 2 1036 213 39 0 0 chrX 59208846 59208872 -107441424 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2 1036 781 188 22 0 chrX 59208890 59209028 -107441268 - B1_Mur3 SINE Alu -8 141 1 2 1036 329 245 30 60 chrX 59209334 59209434 -107440862 + LTR52 LTR ERVL 22 118 -303 2 1036 32 26 0 0 chrX 59209540 59209579 -107440717 + AT_rich Low_complexity Low_complexity 1 39 0 2 1036 3869 75 2 4 chrX 59209780 59210287 -107440009 + L1Md_F2 LINE L1 6065 6570 -12 2 1036 460 323 12 35 chrX 59210810 59210980 -107439316 - RMER15 LTR ERVL -69 506 341 2 1036 539 300 77 21 chrX 59212027 59212262 -107438034 - RMER15-int LTR ERVL -2444 2555 2308 2 1036 270 345 71 28 chrX 59212281 59212493 -107437803 - RMER15-int LTR ERVL -2792 2207 1987 2 1036 26 0 0 0 chrX 59213244 59213270 -107437026 + AT_rich Low_complexity Low_complexity 1 26 0 2 1036 2587 52 10 11 chrX 59213270 59213622 -107436674 - L1Md_A LINE L1 -576 6006 5689 2 1036 2211 50 4 7 chrX 59214141 59214422 -107435874 + L1Md_F2 LINE L1 5306 5585 -298 2 1036 7570 69 4 5 chrX 59214423 59215419 -107434877 + L1Md_F2 LINE L1 5587 6581 -1 2 1036 39086 64 4 23 chrX 59215610 59222799 -107427497 - L1Md_T LINE L1 0 6582 99 2 1036 7001 12 4 8 chrX 59222816 59222954 -107427342 + RLTR13B2 LTR ERVK 1 138 -684 2 1036 2657 76 34 36 chrX 59222954 59223366 -107426930 - IAPLTR2a LTR ERVK 0 411 1 2 1036 7001 12 4 8 chrX 59223366 59224053 -107426243 + RLTR13B2 LTR ERVK 139 822 0 2 1036 437 320 0 15 chrX 59224077 59224207 -107426089 - B1F1 SINE Alu -17 132 5 2 1036 359 339 10 52 chrX 59224254 59224447 -107425849 - RMER15-int LTR ERVL -4327 672 488 2 1036 256 351 0 0 chrX 59224925 59225002 -107425294 - MLT1D LTR MaLR -389 116 40 2 1036 650 342 5 15 chrX 59225766 59225962 -107424334 + B3A SINE B2 3 196 -2 2 1036 26 30 0 0 chrX 59225963 59225996 -107424300 + AT_rich Low_complexity Low_complexity 1 33 0 2 1036 475 303 118 45 chrX 59226208 59226495 -107423801 - Lx8 LINE L1 -56 7417 7110 2 1036 3124 73 22 0 chrX 59226506 59226915 -107423381 - L1_Mus1 LINE L1 -1 6566 6149 2 1036 320 49 0 0 chrX 59226915 59226956 -107423340 + L1_Mus1 LINE L1 6119 6159 -408 2 1036 289 299 15 0 chrX 59227059 59227126 -107423170 - ID4_ SINE ID -6 77 10 2 1036 591 182 180 14 chrX 59227209 59227348 -107422948 + MTD LTR MaLR 6 167 -252 2 1036 6979 26 0 0 chrX 59227357 59228205 -107422091 - L1Md_A LINE L1 0 6582 5735 2 1036 419 293 34 60 chrX 59228205 59228354 -107421942 + MTD LTR MaLR 145 289 -130 2 1036 1005 171 0 0 chrX 59228575 59228745 -107421551 + Lx4A LINE L1 6178 6347 -711 2 1036 710 254 32 27 chrX 59229326 59229545 -107420751 + MLT1C LTR MaLR 3 222 -245 2 1036 30 0 0 0 chrX 59229633 59229663 -107420633 + AT_rich Low_complexity Low_complexity 1 30 0 2 1036 25 0 0 0 chrX 59229791 59229816 -107420480 + AT_rich Low_complexity Low_complexity 1 25 0 2 1036 354 45 0 0 chrX 59230008 59230052 -107420244 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 2 1036 3034 184 54 25 chrX 59230052 59230732 -107419564 - Lx4B LINE L1 -19 7039 6340 2 1036 327 220 71 71 chrX 59230733 59230860 -107419436 - L1M2 LINE L1 -2944 3199 3073 2 1036 1046 70 0 118 chrX 59230880 59231058 -107419238 - L1_Mus2 LINE L1 -2 6564 6408 2 1036 968 226 56 4 chrX 59231089 59231338 -107418958 - Lx4B LINE L1 -710 6348 6087 2 1036 1154 147 139 0 chrX 59231367 59231612 -107418684 + Lx5 LINE L1 5788 6066 -984 2 1036 1129 76 0 0 chrX 59231841 59231979 -107418317 + B1_Mm SINE Alu 2 139 -8 2 1036 227 31 0 30 chrX 59231979 59232012 -107418284 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 2 1036 2361 80 48 0 chrX 59233321 59233633 -107416663 + ORR1A2 LTR MaLR 1 327 0 2 1036 1697 317 80 52 chrX 59233783 59234856 -107415440 + Lx8 LINE L1 6364 7466 -7 2 1036 1135 237 77 50 chrX 59235015 59235495 -107414801 + L1VL4 LINE L1 208 700 -5602 2 1036 4805 152 13 23 chrX 59235495 59236323 -107413973 + Lx2B LINE L1 6177 6996 -4 3 1036 2690 57 3 0 chrX 59236322 59236658 -107413638 + L1Md_F2 LINE L1 6234 6570 -12 3 1036 369 0 0 0 chrX 59236815 59236856 -107413440 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1036 29473 92 4 6 chrX 59236928 59239955 -107410341 + L1Md_F2 LINE L1 179 3205 -2678 3 1036 2518 56 0 0 chrX 59239955 59240276 -107410020 + L1Md_F2 LINE L1 6262 6582 0 3 1036 29473 86 5 9 chrX 59240276 59242673 -107407623 + L1Md_F2 LINE L1 3206 5586 -297 3 1036 8137 47 3 0 chrX 59242674 59243664 -107406632 + L1Md_F2 LINE L1 5588 6580 -2 3 1036 461 314 22 78 chrX 59243721 59243952 -107406344 + MIR SINE MIR 45 262 0 3 1037 953 118 0 50 chrX 59244927 59245088 -107405208 + L1_Mus2 LINE L1 6413 6565 -1 3 1037 185 186 68 23 chrX 59245294 59245338 -107404958 + L3 LINE CR1 1671 1716 -2773 3 1037 215 331 51 44 chrX 59245609 59245767 -107404529 - MIRb SINE MIR -7 261 103 3 1037 477 0 0 0 chrX 59246537 59246590 -107403706 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1037 1908 227 153 78 chrX 59246662 59247407 -107402889 + RMER19B LTR ERVK 1 690 -212 3 1037 274 170 0 0 chrX 59247681 59247734 -107402562 + L1Md_F LINE L1 654 706 -5813 3 1037 2218 236 23 32 chrX 59247805 59248514 -107401782 + L1VL4 LINE L1 542 1223 -5437 3 1037 9904 109 14 74 chrX 59248500 59251258 -107399038 + L1_Mus1 LINE L1 4005 6567 0 3 1037 1643 136 4 154 chrX 59251259 59251519 -107398777 + L1VL4 LINE L1 597 803 -5499 3 1037 3037 73 2 8 chrX 59251519 59251917 -107398379 + MTA_Mm LTR MaLR 1 396 0 3 1037 4257 96 8 19 chrX 59251917 59252659 -107397637 + L1VL4 LINE L1 804 1532 -2027 3 1037 774 140 0 0 chrX 59252697 59252833 -107397463 - L1Md_F LINE L1 -2413 3470 3335 3 1037 2890 116 10 2 chrX 59252842 59253431 -107396865 - L1Md_F LINE L1 -5505 1219 410 3 1037 2311 326 24 10 chrX 59253476 59254401 -107395895 + Lx7 LINE L1 6303 7240 -456 3 1037 441 36 0 0 chrX 59254501 59254556 -107395740 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1037 33 25 0 0 chrX 59254605 59254645 -107395651 + AT_rich Low_complexity Low_complexity 1 40 0 3 1037 2509 81 33 0 chrX 59254692 59255051 -107395245 + RLTR22_Mus LTR ERVK 1 371 -1437 3 1037 25 65 0 0 chrX 59255058 59255104 -107395192 + AT_rich Low_complexity Low_complexity 1 46 0 3 1037 8387 92 12 28 chrX 59255146 59257141 -107393155 - L1Md_F2 LINE L1 -2 6580 4601 3 1037 1880 63 4 0 chrX 59257141 59257378 -107392918 - L1Md_T LINE L1 -1 6581 6344 3 1037 6480 194 7 132 chrX 59257378 59258017 -107392279 - L1_Mur1 LINE L1 -1283 4603 4186 3 1037 10688 134 5 1 chrX 59258013 59259842 -107390454 - L1_Mm LINE L1 -469 5414 3579 3 1037 674 92 8 25 chrX 59259843 59259965 -107390331 + L1Md_F2 LINE L1 6462 6581 -1 3 1037 328 237 103 33 chrX 59261521 59261697 -107388599 + B3A SINE B2 1 195 0 3 1037 674 276 21 26 chrX 59263291 59263481 -107386815 + B3 SINE B2 18 206 -10 3 1037 216 0 0 0 chrX 59263638 59263662 -107386634 + (TC)n Simple_repeat Simple_repeat 2 25 0 3 1037 450 212 0 0 chrX 59263663 59263762 -107386534 + (TATG)n Simple_repeat Simple_repeat 2 100 0 3 1037 270 0 0 0 chrX 59264087 59264117 -107386179 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 1037 1629 229 33 5 chrX 59264145 59264513 -107385783 - Lx5 LINE L1 0 7050 6673 3 1037 203 282 0 71 chrX 59264699 59264783 -107385513 + (TATATG)n Simple_repeat Simple_repeat 4 81 0 3 1037 2580 181 31 154 chrX 59264892 59265665 -107384631 - RMER1B Other Other -47 1019 353 3 1037 336 133 0 0 chrX 59265697 59265757 -107384539 + (TTTTC)n Simple_repeat Simple_repeat 2 61 0 3 1037 2335 53 0 0 chrX 59265759 59266044 -107384252 - L1_Mus1 LINE L1 -1 6566 6282 3 1037 288 375 98 0 chrX 59266113 59266428 -107383868 + Lx8 LINE L1 6783 7128 -345 3 1037 27 0 0 0 chrX 59266710 59266737 -107383559 + AT_rich Low_complexity Low_complexity 1 27 0 3 1037 230 118 176 0 chrX 59266768 59266819 -107383477 + Lx8 LINE L1 6871 6930 -543 3 1037 204 40 0 0 chrX 59266819 59266844 -107383452 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1037 3617 108 6 0 chrX 59266867 59267403 -107382893 - Lx LINE L1 -284 6370 5832 3 1037 189 0 0 0 chrX 59267422 59267443 -107382853 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 1037 29048 96 33 9 chrX 59267580 59273604 -107376692 - L1Md_F2 LINE L1 -4 6578 412 3 1037 846 30 0 0 chrX 59273895 59273996 -107376300 + (TA)n Simple_repeat Simple_repeat 2 102 0 3 1037 193 219 0 0 chrX 59274401 59274442 -107375854 - L2c LINE L2 0 3387 3347 3 1037 21 57 0 0 chrX 59274466 59274501 -107375795 + AT_rich Low_complexity Low_complexity 1 35 0 3 1037 561 393 43 5 chrX 59275279 59275486 -107374810 + B4A SINE B4 1 215 -77 3 1037 939 142 11 6 chrX 59276093 59276270 -107374026 + GA-rich Low_complexity Low_complexity 3 180 0 3 1037 356 339 17 11 chrX 59276303 59276479 -107373817 + Lx7 LINE L1 7070 7246 -450 3 1037 230 257 86 68 chrX 59276484 59276705 -107373591 + Lx7 LINE L1 7455 7679 -17 3 1037 22 70 0 0 chrX 59276743 59276786 -107373510 + AT_rich Low_complexity Low_complexity 1 43 0 3 1037 564 39 0 13 chrX 59276814 59276892 -107373404 - L1_Mus1 LINE L1 -1 6566 6490 3 1037 408 65 0 62 chrX 59276892 59276957 -107373339 + L1_Mus1 LINE L1 6225 6285 -282 3 1037 419 147 19 47 chrX 59276957 59277064 -107373232 + L1_Mus4 LINE L1 6533 6636 0 3 1037 9889 123 47 9 chrX 59277486 59279707 -107370589 - L1VL4 LINE L1 -2398 3488 1087 3 1037 245 29 29 0 chrX 59279707 59279741 -107370555 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3 1037 1086 86 0 0 chrX 59279741 59279880 -107370416 - B1_Mm SINE Alu -8 139 1 3 1037 5021 141 4 21 chrX 59279880 59280454 -107369842 - L1VL4 LINE L1 -5571 1086 522 3 1037 426 69 0 0 chrX 59280627 59280685 -107369611 + (TA)n Simple_repeat Simple_repeat 1 58 0 3 1037 402 108 0 0 chrX 59280688 59280753 -107369543 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 1037 721 286 27 27 chrX 59280753 59280940 -107369356 - B3 SINE B2 -28 188 2 3 1037 435 317 46 52 chrX 59281230 59281599 -107368697 - L3 LINE CR1 -546 3943 3577 3 1037 2662 194 50 16 chrX 59282364 59282547 -107367749 + RMER15 LTR ERVL 1 186 -389 3 1037 3217 71 2 0 chrX 59282547 59282957 -107367339 + L1_Mus1 LINE L1 6153 6563 -4 3 1037 2662 194 50 16 chrX 59282957 59283329 -107366967 + RMER15 LTR ERVL 187 575 0 3 1037 296 327 44 39 chrX 59283713 59283903 -107366393 + MIRc SINE MIR 48 240 -28 3 1037 226 213 0 0 chrX 59284136 59284183 -107366113 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1037 203 273 0 0 chrX 59284400 59284444 -107365852 + CT-rich Low_complexity Low_complexity 2 45 0 3 1037 517 66 0 0 chrX 59284522 59284598 -107365698 + L1Md_F3 LINE L1 6496 6571 -13 3 1037 272 350 101 58 chrX 59286211 59286399 -107363897 + L2c LINE L2 2954 3149 -238 3 1037 539 53 13 0 chrX 59286771 59286846 -107363450 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 3 1037 360 330 9 35 chrX 59286919 59287035 -107363261 - RSINE1 SINE B4 -4 161 49 3 1037 428 226 32 0 chrX 59287237 59287330 -107362966 - RMER13A LTR ERVK -378 482 387 3 1037 1048 267 78 16 chrX 59287319 59287574 -107362722 - RMER13A LTR ERVK -589 271 1 3 1037 890 327 47 6 chrX 59288655 59288996 -107361300 + Lx8 LINE L1 6193 6547 -926 3 1037 1192 244 48 24 chrX 59288998 59289292 -107361004 - ORR1D2-int LTR MaLR -521 849 549 3 1037 28382 109 13 28 chrX 59289307 59293611 -107356685 - L1_Mus1 LINE L1 0 6567 2380 3 1037 2880 38 12 0 chrX 59293611 59293953 -107356343 - ORR1A0 LTR MaLR 0 346 1 3 1037 28382 140 38 33 chrX 59293953 59296040 -107354256 - L1_Mus1 LINE L1 -3504 2379 234 3 1037 1650 275 25 80 chrX 59296046 59296581 -107353715 - ORR1D2-int LTR MaLR -946 634 63 3 1037 582 75 0 0 chrX 59296581 59296661 -107353635 + (GGA)n Simple_repeat Simple_repeat 2 81 0 3 1037 941 83 19 19 chrX 59296669 59296828 -107353468 + (GGAAA)n Simple_repeat Simple_repeat 1 159 0 3 1037 1650 265 20 90 chrX 59296828 59296916 -107353380 - ORR1D2-int LTR MaLR -1308 62 1 3 1037 907 288 107 16 chrX 59296916 59297187 -107353109 - ORR1D2 LTR MaLR 0 370 76 3 1037 2747 67 67 0 chrX 59297187 59297560 -107352736 + L1_Mus1 LINE L1 6170 6567 0 3 1037 408 314 158 49 chrX 59297560 59297587 -107352709 - ORR1D2 LTR MaLR -303 75 49 3 1037 2430 113 141 0 chrX 59298306 59298738 -107351558 - RLTR47_MM LTR ERV1 -39 493 1 3 1037 257 317 47 35 chrX 59298869 59298954 -107351342 - PB1D10 SINE Alu -8 109 24 3 1037 291 116 0 0 chrX 59299588 59299631 -107350665 - Lx9 LINE L1 -303 7341 7299 3 1037 436 170 138 166 chrX 59299627 59299708 -107350588 + Lx9 LINE L1 7405 7516 -128 3 1037 767 101 8 0 chrX 59299708 59299827 -107350469 + (TA)n Simple_repeat Simple_repeat 1 120 0 3 1037 436 170 138 166 chrX 59299827 59299992 -107350304 + Lx9 LINE L1 7517 7643 -1 3 1037 216 0 0 0 chrX 59300099 59300123 -107350173 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1037 843 55 0 0 chrX 59300391 59300500 -107349796 + (GAAA)n Simple_repeat Simple_repeat 2 110 0 3 1037 1491 0 0 16 chrX 59300504 59300686 -107349610 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 3 1037 1413 204 62 21 chrX 59300726 59300988 -107349308 + RMER17C LTR ERVK 1 262 -148 3 1037 603 0 0 0 chrX 59300988 59301055 -107349241 + (CTATA)n Simple_repeat Simple_repeat 1 67 0 3 1037 1413 204 62 21 chrX 59301055 59301178 -107349118 + RMER17C LTR ERVK 263 401 -9 3 1037 308 337 170 11 chrX 59302106 59302376 -107347920 - CR1_Mam LINE CR1 -552 1652 1340 3 1037 6446 99 18 33 chrX 59302506 59303800 -107346496 - L1_Mus2 LINE L1 0 6566 5290 3 1037 7701 117 8 123 chrX 59303802 59305423 -107344873 - L1_Mus2 LINE L1 -1374 4509 3075 3 1037 994 127 46 0 chrX 59305422 59305595 -107344701 + MusHAL1 LINE L1 1309 1489 -1223 3 1037 423 267 174 16 chrX 59305603 59305793 -107344503 - Lx LINE L1 -2 7471 7252 3 1037 1621 181 37 0 chrX 59305794 59306064 -107344232 - MTC LTR MaLR -74 347 68 3 1037 2390 227 15 24 chrX 59306070 59306615 -107343681 - Lx LINE L1 -1 6653 6114 3 1037 3801 145 10 86 chrX 59306616 59307063 -107343233 + Lx LINE L1 5167 5555 -328 3 1037 2291 19 86 0 chrX 59307063 59307332 -107342964 + RLTR10B LTR ERVK 1 292 0 3 1037 3801 122 13 8 chrX 59307332 59307824 -107342472 + Lx LINE L1 5556 6049 -605 3 1037 2267 112 196 0 chrX 59308905 59309334 -107340962 + RLTR47_MM LTR ERV1 20 532 0 3 1037 394 234 43 72 chrX 59309340 59309499 -107340797 + Lx4B LINE L1 5708 5870 -1188 3 1037 4623 187 31 38 chrX 59309686 59310579 -107339717 - RLTR25A LTR ERVK 0 1028 127 3 1037 198 0 0 0 chrX 59310579 59310601 -107339695 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 1037 4623 177 20 30 chrX 59310601 59310726 -107339570 - RLTR25A LTR ERVK -977 126 1 3 1037 224 407 114 22 chrX 59310947 59311616 -107338680 - L2 LINE L2 -2328 1091 362 3 1037 285 160 0 0 chrX 59311785 59311835 -107338461 + Lx9 LINE L1 7417 7466 -178 4 1037 238 400 9 0 chrX 59311835 59311940 -107338356 - RMER12 LTR ERVK -472 850 745 4 1037 28 48 0 0 chrX 59311996 59312038 -107338258 + AT_rich Low_complexity Low_complexity 1 42 0 4 1037 619 272 22 7 chrX 59312064 59312201 -107338095 + B1_Mur1 SINE Alu 6 144 -5 4 1037 228 241 37 9 chrX 59312625 59312734 -107337562 + (TA)n Simple_repeat Simple_repeat 2 113 0 4 1037 272 291 32 64 chrX 59313799 59313924 -107336372 - MIRb SINE MIR -58 210 90 4 1037 297 89 0 0 chrX 59314660 59314705 -107335591 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 4 1037 22 0 0 0 chrX 59315194 59315216 -107335080 + AT_rich Low_complexity Low_complexity 1 22 0 4 1037 265 341 30 37 chrX 59315573 59315707 -107334589 - Lx8 LINE L1 -180 7293 7161 4 1037 3613 81 6 2 chrX 59316332 59316805 -107333491 - MT2C_Mm LTR ERVL 0 475 1 4 1037 21 57 0 0 chrX 59316855 59316890 -107333406 + AT_rich Low_complexity Low_complexity 1 35 0 4 1037 1098 269 92 23 chrX 59317490 59317807 -107332489 - ORR1D2 LTR MaLR 0 370 28 4 1037 4306 26 0 0 chrX 59317807 59318300 -107331996 - MT2_Mm LTR ERVL 0 493 1 4 1037 1098 269 92 23 chrX 59318300 59318328 -107331968 - ORR1D2 LTR MaLR -343 27 1 4 1037 589 207 87 17 chrX 59318337 59318509 -107331787 - ORR1D2-int LTR MaLR -23 1347 1164 4 1037 451 197 13 159 chrX 59318506 59318567 -107331729 + RMER20A LTR ERVK 72 128 -388 4 1037 207 0 0 0 chrX 59318567 59318590 -107331706 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 4 1037 451 197 13 159 chrX 59318590 59318614 -107331682 + RMER20A LTR ERVK 129 148 -368 4 1037 297 0 0 0 chrX 59318614 59318647 -107331649 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1037 451 197 13 159 chrX 59318647 59318717 -107331579 + RMER20A LTR ERVK 149 204 -312 4 1037 40678 15 2 6 chrX 59318727 59325718 -107324578 - L1Md_A LINE L1 0 6582 1 4 1037 1060 265 30 30 chrX 59325721 59326052 -107324244 + RMER20A LTR ERVK 186 516 0 4 1037 2176 277 157 50 chrX 59326052 59327105 -107323191 - ORR1D2-int LTR MaLR -203 1167 2 4 1037 537 233 34 69 chrX 59327106 59327246 -107323050 - ORR1D2 LTR MaLR 0 370 237 4 1037 627 14 0 0 chrX 59327246 59327318 -107322978 + (GA)n Simple_repeat Simple_repeat 2 73 0 4 1037 537 327 65 51 chrX 59327318 59327483 -107322813 - ORR1D2 LTR MaLR -134 236 8 4 1037 233 417 14 14 chrX 59328122 59328268 -107322028 - MLT1K LTR MaLR -293 302 157 4 1037 447 284 0 0 chrX 59328601 59328703 -107321593 + PB1D10 SINE Alu 1 102 -15 4 1037 911 133 0 0 chrX 59328926 59329061 -107321235 + B1_Mus1 SINE Alu 1 135 -13 4 1037 22 0 0 0 chrX 59329069 59329091 -107321205 + AT_rich Low_complexity Low_complexity 1 22 0 4 1037 681 263 54 35 chrX 59329160 59329370 -107320926 - B3A SINE B2 -6 192 2 4 1037 470 351 6 13 chrX 59329386 59329542 -107320754 - RSINE1 SINE B4 -8 157 3 4 1037 2432 204 53 6 chrX 59329563 59330075 -107320221 - Lx7 LINE L1 -357 7339 6804 4 1037 435 38 0 0 chrX 59330245 59330298 -107319998 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 1037 2283 199 12 41 chrX 59330447 59330934 -107319362 + RLTR11A2 LTR ERVK 10 482 -45 4 1037 2942 17 48 3 chrX 59330934 59331285 -107319011 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1037 45772 28 12 3 chrX 59331285 59337662 -107312634 - IAPEz-int LTR ERVK 0 6481 67 4 1037 965 85 152 0 chrX 59337633 59337797 -107312499 - IAPEz-int LTR ERVK -6285 196 8 4 1037 2972 17 48 3 chrX 59337797 59338148 -107312148 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1037 270 0 0 0 chrX 59338250 59338280 -107312016 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1037 594 285 56 8 chrX 59338281 59338555 -107311741 - L1M2 LINE L1 -416 5773 5473 4 1037 396 257 54 16 chrX 59338602 59338788 -107311508 + L1M2 LINE L1 5135 5327 -816 4 1037 987 247 112 24 chrX 59339438 59339778 -107310518 + ORR1D2 LTR MaLR 1 370 0 4 1037 315 303 60 52 chrX 59339983 59340251 -107310045 + RMER17C LTR ERVK 92 361 -49 4 1037 180 113 56 19 chrX 59341764 59341818 -107308478 + T-rich Low_complexity Low_complexity 1 56 0 4 1037 1187 264 18 25 chrX 59342061 59342344 -107307952 + B4 SINE B4 8 288 -4 4 1037 198 167 0 0 chrX 59342365 59342401 -107307895 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1037 356 262 55 18 chrX 59342483 59342592 -107307704 - PB1D10 SINE Alu -4 113 1 4 1037 338 118 0 37 chrX 59342684 59342734 -107307562 + B1_Mus2 SINE Alu 60 136 -11 4 1037 207 0 0 0 chrX 59342734 59342757 -107307539 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1037 259 328 28 92 chrX 59342952 59343093 -107307203 - ID_B1 SINE B4 -87 137 6 4 1037 399 316 112 3 chrX 59343174 59343460 -107306836 + L1_Rod LINE L1 4718 5089 -1054 4 1037 503 0 32 0 chrX 59343937 59343999 -107306297 + (TATG)n Simple_repeat Simple_repeat 2 65 0 4 1037 1631 233 37 58 chrX 59344216 59344315 -107305981 - MTD LTR MaLR 0 419 335 4 1037 3308 164 18 4 chrX 59344315 59344871 -107305425 - Lx4A LINE L1 -1 7057 6494 4 1037 1631 233 37 58 chrX 59344871 59345199 -107305097 - MTD LTR MaLR -85 334 1 4 1037 3661 109 39 2 chrX 59345407 59345968 -107304328 - Lx3_Mus LINE L1 0 7009 6428 4 1037 702 255 53 14 chrX 59346410 59346617 -107303679 + B3 SINE B2 2 216 0 4 1037 745 261 45 35 chrX 59346638 59346837 -107303459 - MTC LTR MaLR 0 421 221 4 1037 2256 32 0 18 chrX 59346849 59347134 -107303162 + L1Md_F2 LINE L1 5306 5585 -298 4 1037 8127 40 5 1 chrX 59347135 59348127 -107302169 + L1Md_F2 LINE L1 5587 6582 0 4 1037 1854 136 62 47 chrX 59349466 59349867 -107300429 + RMER17C LTR ERVK 1 407 -3 4 1037 1322 254 38 75 chrX 59349868 59350425 -107299871 + RMER17C-int LTR ERVK 1 536 -2702 4 1037 1887 48 0 0 chrX 59350482 59350711 -107299585 - L1_Mus1 LINE L1 0 6567 6339 4 1037 285 139 0 0 chrX 59351100 59351143 -107299153 + 7SLRNA srpRNA srpRNA 166 208 -106 4 1037 690 152 70 41 chrX 59351527 59351698 -107298598 + RMER17C-int LTR ERVK 1276 1451 -1787 4 1037 21735 168 8 10 chrX 59351705 59357571 -107292725 - Lx LINE L1 -8 6646 782 4 1037 265 116 23 0 chrX 59357575 59357618 -107292678 - ORR1A3 LTR MaLR 0 326 283 4 1037 6936 38 10 1 chrX 59357639 59358504 -107291792 - ORR1A3-int LTR MaLR 0 1792 920 4 1037 4924 54 1 0 chrX 59358499 59359165 -107291131 - ORR1A3-int LTR MaLR -1125 667 1 4 1037 288 70 23 0 chrX 59359165 59359208 -107291088 - ORR1A3 LTR MaLR 0 326 283 4 1037 4263 162 97 43 chrX 59359464 59360572 -107289724 + RMER17C-int LTR ERVK 1436 2602 -636 4 1037 35798 20 4 7 chrX 59360572 59365985 -107284311 + L1Md_A LINE L1 197 5586 -297 4 1037 8471 32 0 0 chrX 59365985 59366980 -107283316 + L1Md_A LINE L1 5587 6581 -1 4 1037 3163 128 94 33 chrX 59366980 59367587 -107282709 + RMER17C-int LTR ERVK 2595 3238 0 4 1037 836 206 11 77 chrX 59367589 59367863 -107282433 + RMER17C LTR ERVK 3 258 -152 4 1037 213 132 0 0 chrX 59367880 59367918 -107282378 + (TCCC)n Simple_repeat Simple_repeat 4 41 0 4 1037 1125 170 31 8 chrX 59367920 59368181 -107282115 - L1_Mur3 LINE L1 -3819 2061 1795 4 1037 819 135 212 24 chrX 59368177 59368321 -107281975 - L1_Mur3 LINE L1 -4362 1518 1353 4 1037 423 0 0 0 chrX 59368321 59368368 -107281928 + (TTTA)n Simple_repeat Simple_repeat 1 47 0 4 1037 819 135 212 24 chrX 59368368 59368473 -107281823 - L1_Mur3 LINE L1 -4528 1352 1222 4 1037 687 191 20 0 chrX 59368477 59368629 -107281667 - L1_Mur3 LINE L1 -6671 1057 903 4 1037 351 60 0 0 chrX 59368644 59368694 -107281602 + (TTGG)n Simple_repeat Simple_repeat 2 51 0 4 1037 2904 186 41 17 chrX 59368756 59369342 -107280954 - RMER6D LTR ERVK -91 629 30 4 1037 338 169 197 0 chrX 59369342 59369413 -107280883 - L1_Mur3 LINE L1 -7588 140 56 4 1037 22 56 0 0 chrX 59370306 59370342 -107279954 + AT_rich Low_complexity Low_complexity 1 36 0 4 1037 339 44 0 0 chrX 59371572 59371617 -107278679 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1037 24 0 0 0 chrX 59371942 59371966 -107278330 + AT_rich Low_complexity Low_complexity 1 24 0 4 1037 26 0 0 0 chrX 59371983 59372009 -107278287 + AT_rich Low_complexity Low_complexity 1 26 0 4 1037 324 305 14 7 chrX 59372483 59372586 -107277710 - B1_Mur1 SINE Alu -21 128 27 4 1037 274 412 23 23 chrX 59372845 59373106 -107277190 - L2 LINE L2 -611 2808 2548 4 1037 650 47 12 0 chrX 59373222 59373308 -107276988 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 4 1037 26 0 0 0 chrX 59373553 59373579 -107276717 + AT_rich Low_complexity Low_complexity 1 26 0 4 1037 1096 110 0 0 chrX 59373719 59373864 -107276432 + B1_Mus1 SINE Alu 1 145 -3 4 1037 21 0 0 0 chrX 59373921 59373942 -107276354 + AT_rich Low_complexity Low_complexity 1 21 0 4 1037 1561 118 0 0 chrX 59374104 59374333 -107275963 - L1_Mm LINE L1 -162 5721 5493 4 1037 1564 103 17 29 chrX 59374333 59374572 -107275724 + L1_Mus1 LINE L1 6331 6566 -1 4 1037 1031 73 0 0 chrX 59374582 59374718 -107275578 - L1_Mm LINE L1 -273 5610 5475 4 1037 1086 126 72 63 chrX 59374715 59374936 -107275360 + L1Md_F2 LINE L1 6348 6570 -12 4 1038 312 336 0 82 chrX 59375842 59376001 -107274295 - B1F1 SINE Alu -3 146 1 4 1038 223 192 0 133 chrX 59376039 59376099 -107274197 - B1_Mur4 SINE Alu 0 150 99 4 1038 329 279 32 123 chrX 59376268 59376423 -107273873 + MER20 DNA MER1_type 24 164 -55 4 1038 1231 78 0 6 chrX 59376423 59376591 -107273705 + B2_Mm2 SINE B2 2 168 -27 4 1038 431 278 103 9 chrX 59377565 59377767 -107272529 + MIRc SINE MIR 10 223 -45 4 1038 1351 218 14 3 chrX 59378274 59378564 -107271732 + RMER1B Other Other 550 842 -224 4 1038 313 297 111 28 chrX 59379087 59379267 -107271029 + L1M4 LINE L1 3702 3896 -2250 4 1038 201 94 0 0 chrX 59380314 59380346 -107269950 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 4 1038 186 118 0 0 chrX 59381008 59381042 -107269254 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 4 1038 1275 275 3 1 chrX 59381087 59381426 -107268870 + RMER1B Other Other 239 639 -427 4 1038 506 250 55 38 chrX 59381438 59381745 -107268551 - RMER17C LTR ERVK 0 410 1 4 1038 8375 144 54 68 chrX 59381747 59382405 -107267891 - RMER17C-int LTR ERVK -2 3236 2586 4 1038 233 240 0 0 chrX 59382405 59382455 -107267841 + LSU-rRNA_Hsa rRNA rRNA 4202 4251 -784 4 1038 8375 144 54 68 chrX 59382455 59383111 -107267185 - RMER17C-int LTR ERVK -2 2585 1936 4 1038 249 33 0 0 chrX 59383111 59383141 -107267155 + (TTAA)n Simple_repeat Simple_repeat 4 33 0 4 1038 8375 144 54 68 chrX 59383141 59383655 -107266641 - RMER17C-int LTR ERVK -1303 1935 1387 4 1038 1066 29 0 0 chrX 59383671 59383807 -107266489 - L1Md_F2 LINE L1 -1 6581 6446 4 1038 1859 39 8 0 chrX 59383821 59384055 -107266241 + L1Md_F3 LINE L1 5952 6187 -397 4 1038 585 132 0 26 chrX 59384079 59384230 -107266066 - L1Md_F2 LINE L1 0 6582 6468 4 1038 418 68 0 17 chrX 59384231 59384291 -107266005 + L1_Mus1 LINE L1 6408 6466 -101 4 1038 3358 39 10 2 chrX 59384291 59384700 -107265596 + L1Md_F3 LINE L1 6172 6583 -1 4 1038 1001 233 169 53 chrX 59384735 59385200 -107265096 - RMER17C-int LTR ERVK -1838 1400 882 4 1038 442 193 198 30 chrX 59385468 59385636 -107264660 - RMER17C LTR ERVK -11 399 76 4 1038 396 0 0 0 chrX 59385636 59385680 -107264616 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1038 438 213 89 8 chrX 59385680 59385755 -107264541 - RMER17C LTR ERVK -335 75 1 4 1038 1350 221 121 3 chrX 59385755 59386118 -107264178 + RMER1B Other Other 649 1054 -12 4 1038 951 287 91 29 chrX 59386271 59386612 -107263684 - ORR1D2 LTR MaLR -4 366 5 4 1038 24 96 0 0 chrX 59386994 59387067 -107263229 + AT_rich Low_complexity Low_complexity 1 73 0 4 1038 249 268 82 0 chrX 59387276 59387373 -107262923 - Lx7 LINE L1 -31 7665 7561 4 1038 2878 235 53 17 chrX 59387439 59387500 -107262796 - Lx7 LINE L1 -279 7417 7350 4 1038 207 0 0 0 chrX 59387500 59387523 -107262773 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1038 2878 235 53 17 chrX 59387523 59388235 -107262061 - Lx7 LINE L1 -347 7349 6616 4 1038 232 235 118 73 chrX 59388549 59388659 -107261637 + LTR64 LTR ERV1 242 356 -172 4 1038 1074 179 113 72 chrX 59389597 59389726 -107260570 - Lx7 LINE L1 -1675 6021 5879 4 1038 3344 84 4 7 chrX 59389726 59390180 -107260116 + L1_Mus3 LINE L1 6183 6635 -3 4 1038 1074 179 113 72 chrX 59390180 59390369 -107259927 - Lx7 LINE L1 -1818 5878 5690 4 1038 27 0 0 0 chrX 59390727 59390754 -107259542 + AT_rich Low_complexity Low_complexity 1 27 0 4 1038 4324 213 87 3 chrX 59391225 59392288 -107258008 - Lx9 LINE L1 -7 7637 6486 4 1038 21 57 0 0 chrX 59392396 59392431 -107257865 + AT_rich Low_complexity Low_complexity 1 35 0 5 1038 349 388 9 46 chrX 59392826 59393045 -107257251 + MLT1I LTR MaLR 198 408 -3 5 1038 905 303 119 0 chrX 59394019 59394270 -107256026 - B4A SINE B4 0 292 12 5 1038 723 124 0 0 chrX 59394386 59394499 -107255797 + (TA)n Simple_repeat Simple_repeat 2 114 0 5 1038 23 0 0 0 chrX 59394923 59394946 -107255350 + AT_rich Low_complexity Low_complexity 1 23 0 5 1038 216 108 73 44 chrX 59395103 59395171 -107255125 + (TTAA)n Simple_repeat Simple_repeat 1 70 0 5 1038 1779 160 45 60 chrX 59395524 59395877 -107254419 - ORR1B1 LTR MaLR 0 394 47 5 1038 588 302 96 39 chrX 59396123 59396561 -107253735 + L1MC LINE L1 2753 3215 -2931 5 1038 205 197 30 0 chrX 59396958 59397024 -107253272 + GA-rich Low_complexity Low_complexity 3 70 0 5 1038 222 37 0 0 chrX 59397028 59397055 -107253241 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 5 1038 510 308 23 14 chrX 59397400 59397614 -107252682 - B3 SINE B2 0 216 1 5 1038 30379 89 2 6 chrX 59398104 59403749 -107246547 + L1Md_F2 LINE L1 98 5585 -298 5 1038 7696 49 23 1 chrX 59403750 59404713 -107245583 + L1Md_F2 LINE L1 5587 6570 -12 5 1038 279 0 0 0 chrX 59405292 59405323 -107244973 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 1038 24 0 0 0 chrX 59405330 59405354 -107244942 + AT_rich Low_complexity Low_complexity 1 24 0 5 1038 254 347 56 9 chrX 59405502 59405687 -107244609 - MIR SINE MIR -66 196 3 5 1038 252 247 113 31 chrX 59405953 59406112 -107244184 - Lx8 LINE L1 -4 7469 7298 5 1038 1542 227 92 39 chrX 59406112 59406380 -107243916 - MTD LTR MaLR -13 406 110 5 1038 2424 35 0 0 chrX 59406380 59406669 -107243627 + L1Md_A LINE L1 6293 6581 -1 5 1038 1542 227 92 39 chrX 59406669 59406781 -107243515 - MTD LTR MaLR -310 109 6 5 1038 443 264 194 0 chrX 59406833 59406962 -107243334 - Lx8 LINE L1 -217 7256 7103 5 1038 4053 223 47 9 chrX 59407315 59408285 -107242011 - Lx5 LINE L1 0 7050 6044 5 1038 425 192 82 96 chrX 59408286 59408369 -107241927 - Lx9 LINE L1 -25 7619 7539 5 1038 1179 48 7 0 chrX 59408369 59408515 -107241781 + B1_Mm SINE Alu 1 147 0 5 1038 425 192 82 96 chrX 59408515 59408650 -107241646 - Lx9 LINE L1 -106 7538 7404 5 1038 378 297 0 0 chrX 59409181 59409272 -107241024 + ID_B1 SINE B4 110 200 -24 5 1038 267 284 0 10 chrX 59409370 59409473 -107240823 + (TG)n Simple_repeat Simple_repeat 1 102 0 5 1038 265 266 0 102 chrX 59409475 59409563 -107240733 - RSINE1 SINE B4 0 165 87 5 1038 209 132 0 26 chrX 59409757 59409796 -107240500 + (AATAG)n Simple_repeat Simple_repeat 5 42 0 5 1038 5540 147 41 83 chrX 59411865 59413017 -107237279 - RLTR25A LTR ERVK 0 1103 1 5 1038 7356 66 8 1 chrX 59413085 59414448 -107235848 - L1_Mus1 LINE L1 -2 6565 5193 5 1038 245 292 75 43 chrX 59414952 59415113 -107235183 - MIR SINE MIR 0 262 97 5 1038 3292 90 65 4 chrX 59415213 59415401 -107234895 - Lx3_Mus LINE L1 -881 6128 5925 5 1038 420 20 0 0 chrX 59415401 59415450 -107234846 + (TTA)n Simple_repeat Simple_repeat 2 50 0 5 1038 4497 90 2 0 chrX 59415450 59416106 -107234190 - Lx3_Mus LINE L1 -1085 5924 5256 5 1038 5924 97 13 5 chrX 59416106 59416953 -107233343 + Lx3_Mus LINE L1 6156 7009 0 5 1038 448 235 0 0 chrX 59416994 59417113 -107233183 + Lx9 LINE L1 7517 7635 -9 5 1038 314 186 28 47 chrX 59417642 59417749 -107232547 + A-rich Low_complexity Low_complexity 3 107 0 5 1038 270 0 0 0 chrX 59417771 59417801 -107232495 + (TA)n Simple_repeat Simple_repeat 1 30 0 5 1038 278 300 0 0 chrX 59417973 59418043 -107232253 - MLT1A LTR MaLR -10 364 295 5 1038 592 197 123 13 chrX 59418042 59418196 -107232100 + RMER16 LTR ERVK 259 429 -104 5 1038 382 304 43 35 chrX 59418207 59418463 -107231833 - Lx9 LINE L1 -29 7615 7358 5 1038 2159 213 33 94 chrX 59418954 59419582 -107230714 - Lx5 LINE L1 -3 7047 6458 5 1038 316 83 17 0 chrX 59419583 59419643 -107230653 + L1Md_F2 LINE L1 6522 6582 0 5 1038 1239 191 8 16 chrX 59419642 59419897 -107230399 - Lx5 LINE L1 -595 6455 6203 5 1038 189 302 346 9 chrX 59420530 59420637 -107229659 + MIRb SINE MIR 5 147 -61 5 1038 213 39 0 0 chrX 59420637 59420663 -107229633 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 5 1038 396 303 65 13 chrX 59421002 59421156 -107229140 - RSINE1 SINE B4 0 165 4 5 1038 271 185 167 0 chrX 59421350 59421458 -107228838 + MER96B DNA hAT 91 216 -201 5 1038 1566 180 20 91 chrX 59422235 59422680 -107227616 + RMER17C LTR ERVK 26 439 -519 5 1038 2592 101 31 29 chrX 59422680 59423100 -107227196 - BGLII LTR ERVK 0 421 1 5 1038 1566 190 5 76 chrX 59423100 59423128 -107227168 + RMER17C LTR ERVK 379 405 -5 5 1038 2672 204 38 46 chrX 59423130 59423953 -107226343 - RMER3D-int LTR ERVK -31 2811 1996 5 1038 530 115 188 34 chrX 59423953 59424070 -107226226 - RMER3D-int LTR ERVK -2270 572 438 5 1038 286 188 14 14 chrX 59424073 59424143 -107226153 - MYSERV16_I-int LTR ERVK -960 1366 1297 5 1038 2565 155 92 71 chrX 59424153 59424805 -107225491 - RMER3D-int LTR ERVK -1163 1679 1014 5 1038 670 66 57 16 chrX 59424849 59424973 -107225323 + (TTTCC)n Simple_repeat Simple_repeat 2 130 0 5 1038 320 189 14 0 chrX 59424962 59425036 -107225260 + C-rich Low_complexity Low_complexity 1 75 0 5 1038 740 180 79 28 chrX 59425050 59425382 -107224914 - RMER3D-int LTR ERVK -2006 836 354 5 1038 519 187 82 46 chrX 59425393 59425589 -107224707 - RMER3D-int LTR ERVK -1988 854 652 5 1038 502 119 0 0 chrX 59425604 59425692 -107224604 - RMER3D-int LTR ERVK -2278 564 489 5 1038 698 144 119 33 chrX 59426058 59426209 -107224087 + RMER17C-int LTR ERVK 1508 1671 -1567 5 1038 711 211 136 36 chrX 59426236 59426487 -107223809 + RMER17C-int LTR ERVK 1741 2016 -1222 5 1038 832 154 23 29 chrX 59426485 59426659 -107223637 + RMER17C-int LTR ERVK 2170 2342 -896 5 1038 1775 151 178 15 chrX 59426657 59427265 -107223031 + RMER17C-int LTR ERVK 2533 3238 0 5 1038 1714 158 29 82 chrX 59427268 59427739 -107222557 + RMER17C LTR ERVK 19 439 -519 5 1038 369 0 0 0 chrX 59427791 59427832 -107222464 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1038 274 221 81 0 chrX 59427840 59427926 -107222370 - Lx9 LINE L1 -143 7501 7409 5 1038 409 270 104 30 chrX 59428070 59428667 -107221629 + L1M4 LINE L1 4942 5608 -576 5 1038 21 0 0 0 chrX 59428692 59428713 -107221583 + AT_rich Low_complexity Low_complexity 1 21 0 5 1038 1828 259 56 127 chrX 59428796 59429840 -107220456 + RMER17B LTR ERVK 1 856 -4 5 1038 468 0 0 0 chrX 59429961 59430013 -107220283 + (TC)n Simple_repeat Simple_repeat 1 52 0 5 1038 441 0 0 0 chrX 59430134 59430183 -107220113 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 1038 1897 165 9 9 chrX 59430326 59430656 -107219640 - Lx LINE L1 -3 6651 6322 5 1038 713 99 18 0 chrX 59430798 59430909 -107219387 + (GAAA)n Simple_repeat Simple_repeat 4 116 0 5 1038 1669 137 0 0 chrX 59431202 59431457 -107218839 + Lx2 LINE L1 6741 6995 -2 5 1038 29 28 0 0 chrX 59431870 59431906 -107218390 + AT_rich Low_complexity Low_complexity 1 36 0 5 1038 339 85 0 0 chrX 59431942 59431989 -107218307 + (CTA)n Simple_repeat Simple_repeat 1 47 0 5 1038 287 213 7 11 chrX 59431989 59432078 -107218218 - Lx3A LINE L1 -12 6997 6895 5 1038 3553 120 39 17 chrX 59432090 59432594 -107217702 + Lx3_Mus LINE L1 6330 6832 -177 5 1038 3031 77 14 5 chrX 59432594 59433010 -107217286 - BGLII LTR ERVK -1 420 1 5 1038 3553 120 39 17 chrX 59433010 59433099 -107217197 + Lx3_Mus LINE L1 6833 6936 -73 5 1038 1521 132 0 46 chrX 59433111 59433396 -107216900 - L1_Mus4 LINE L1 0 6636 6365 5 1038 716 252 14 52 chrX 59433396 59433609 -107216687 - B3 SINE B2 -11 205 1 5 1038 327 25 0 0 chrX 59433623 59433663 -107216633 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1038 4733 82 12 17 chrX 59433726 59434381 -107215915 + L1_Mus4 LINE L1 5983 6634 -2 5 1038 2029 183 40 20 chrX 59434712 59435113 -107215183 - Lx3C LINE L1 -2 6974 6566 5 1038 31 58 0 0 chrX 59435117 59435169 -107215127 + AT_rich Low_complexity Low_complexity 1 52 0 5 1038 442 305 81 53 chrX 59435661 59436021 -107214275 - L1MC5 LINE L1 -740 7221 6852 5 1038 323 99 27 40 chrX 59436244 59436318 -107213978 - RMER17C LTR ERVK 0 410 338 5 1038 359 21 21 0 chrX 59437051 59437099 -107213197 + (TGG)n Simple_repeat Simple_repeat 2 50 0 5 1038 239 162 0 0 chrX 59437342 59437379 -107212917 - RMER17C LTR ERVK -373 37 1 5 1038 24 32 0 0 chrX 59437634 59437665 -107212631 + AT_rich Low_complexity Low_complexity 1 31 0 5 1038 2835 175 31 35 chrX 59437665 59438245 -107212051 - Lx3C LINE L1 -2 6974 6397 5 1038 2288 72 0 19 chrX 59438315 59438627 -107211669 + L1Md_F2 LINE L1 6277 6582 0 5 1038 325 316 20 31 chrX 59438762 59438860 -107211436 + RLTR31_Mur LTR ERVK 457 553 0 5 1038 351 233 39 55 chrX 59438872 59439054 -107211242 + RMER3D-int LTR ERVK 292 470 -2372 5 1038 23 33 0 0 chrX 59439096 59439126 -107211170 + AT_rich Low_complexity Low_complexity 1 30 0 5 1038 1464 163 75 33 chrX 59439132 59439493 -107210803 + RMER3D-int LTR ERVK 1016 1391 -1451 5 1038 4276 225 53 67 chrX 59439639 59441115 -107209181 + RMER3D-int LTR ERVK 1382 2837 -5 5 1038 2587 192 28 22 chrX 59441120 59441663 -107208633 + RLTR31_Mur LTR ERVK 1 546 -7 5 1038 207 69 0 0 chrX 59441663 59441692 -107208604 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1038 3582 232 108 43 chrX 59441694 59442840 -107207456 + Lx6 LINE L1 5626 6846 -614 5 1038 1238 244 55 30 chrX 59442846 59443209 -107207087 + Lx6 LINE L1 7078 7449 -11 5 1038 3795 282 40 13 chrX 59443445 59444135 -107206161 - Lx7 LINE L1 -412 7284 6570 5 1038 3398 54 28 9 chrX 59444135 59444563 -107205733 - RLTR10C LTR ERVK 0 436 1 5 1038 3795 282 40 13 chrX 59444563 59444920 -107205376 - Lx7 LINE L1 -1127 6569 6209 5 1038 2252 125 6 0 chrX 59444923 59445243 -107205053 + ORR1A2 LTR MaLR 6 327 0 5 1038 594 236 14 14 chrX 59445266 59445412 -107204884 + Lx7 LINE L1 5878 6023 -1673 5 1038 828 187 53 32 chrX 59445358 59445546 -107204750 - Lx4A LINE L1 -184 6874 6683 5 1038 8950 135 55 13 chrX 59445569 59449082 -107201214 + L1Md_F2 LINE L1 578 5585 -298 5 1038 7433 74 3 9 chrX 59449083 59450084 -107200212 + L1Md_F2 LINE L1 5587 6581 -1 5 1038 404 301 49 6 chrX 59450129 59450293 -107200003 + Lx7 LINE L1 6003 6173 -1523 5 1038 216 0 0 0 chrX 59450424 59450448 -107199848 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 1038 35382 37 1 3 chrX 59450468 59456435 -107193861 + L1Md_T LINE L1 1 5589 -297 5 1038 9005 4 0 0 chrX 59456435 59457500 -107192796 + L1Md_T LINE L1 5590 6585 0 5 1038 340 63 31 16 chrX 59459707 59459771 -107190525 + (TTTTTG)n Simple_repeat Simple_repeat 2 66 0 5 1038 2747 200 6 10 chrX 59461795 59462280 -107188016 + Lx5 LINE L1 6477 6961 -89 5 1038 4781 108 11 28 chrX 59462280 59463044 -107187252 - RMER17A LTR ERVK 0 751 1 5 1038 2747 200 6 10 chrX 59463044 59463077 -107187219 + Lx5 LINE L1 6962 6993 -57 5 1038 5427 124 25 14 chrX 59463228 59464096 -107186200 + Lx3B LINE L1 6085 6962 -11 5 1038 21 71 0 0 chrX 59464111 59464153 -107186143 + AT_rich Low_complexity Low_complexity 1 42 0 5 1038 450 79 0 0 chrX 59464333 59464396 -107185900 + (GGA)n Simple_repeat Simple_repeat 3 65 0 5 1038 1489 43 27 5 chrX 59464522 59464709 -107185587 - B2_Mm1t SINE B2 -2 191 1 6 1038 708 74 0 0 chrX 59464817 59464912 -107185384 + (TA)n Simple_repeat Simple_repeat 2 96 0 6 1038 595 212 231 66 chrX 59465018 59465200 -107185096 + B3 SINE B2 3 214 -2 6 1038 276 350 120 50 chrX 59465241 59465500 -107184796 + L2 LINE L2 2741 3017 -402 6 1038 613 196 110 6 chrX 59465541 59465705 -107184591 + Lx7 LINE L1 7512 7692 -4 6 1038 471 302 107 38 chrX 59466045 59466334 -107183962 - L1ME1 LINE L1 -13 6166 5858 6 1038 760 104 8 8 chrX 59466740 59466866 -107183430 + (GA)n Simple_repeat Simple_repeat 2 127 0 6 1038 312 424 6 25 chrX 59467471 59467633 -107182663 + RSINE1 SINE B4 7 165 0 6 1038 617 295 102 49 chrX 59467696 59467942 -107182354 - B4A SINE B4 -17 275 17 6 1038 3518 142 142 28 chrX 59468185 59468977 -107181319 + RLTR13D2 LTR ERVK 1 1023 0 6 1038 270 136 0 0 chrX 59471022 59471066 -107179230 + (TATG)n Simple_repeat Simple_repeat 1 44 0 6 1038 942 118 0 14 chrX 59471067 59471205 -107179091 - B1_Mus2 SINE Alu -7 140 5 6 1038 25 83 0 0 chrX 59471311 59471371 -107178925 + AT_rich Low_complexity Low_complexity 1 60 0 6 1038 21 36 0 0 chrX 59471406 59471434 -107178862 + AT_rich Low_complexity Low_complexity 1 28 0 6 1038 2747 241 21 5 chrX 59472547 59473165 -107177131 - Lx5 LINE L1 -11 7039 6412 6 1038 1074 210 5 0 chrX 59473164 59473359 -107176937 + Lx5 LINE L1 6235 6430 -620 6 1038 277 238 62 0 chrX 59473991 59474071 -107176225 - Lx7 LINE L1 -1 7695 7611 6 1038 195 42 0 0 chrX 59474835 59474859 -107175437 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1038 781 277 138 4 chrX 59477088 59477349 -107172947 + MLT1E3 LTR MaLR 322 617 -7 6 1038 410 324 0 115 chrX 59477585 59477633 -107172663 - B2_Mm2 SINE B2 -8 187 143 6 1038 441 0 0 0 chrX 59477633 59477682 -107172614 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1038 410 324 0 115 chrX 59477682 59477842 -107172454 - B2_Mm2 SINE B2 -53 142 3 6 1038 591 40 0 0 chrX 59478305 59478379 -107171917 + (TC)n Simple_repeat Simple_repeat 1 74 0 6 1038 223 350 49 49 chrX 59478724 59478847 -107171449 + B1F SINE Alu 22 144 -5 6 1038 206 315 14 14 chrX 59478915 59478989 -107171307 + CT-rich Low_complexity Low_complexity 2 75 0 6 1038 204 40 0 0 chrX 59479010 59479035 -107171261 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 6 1038 327 85 0 0 chrX 59479047 59479094 -107171202 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 1038 447 19 0 0 chrX 59479094 59479146 -107171150 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 1038 300 53 0 0 chrX 59479146 59479184 -107171112 + (GA)n Simple_repeat Simple_repeat 1 38 0 6 1038 33 25 0 0 chrX 59479237 59479277 -107171019 + AT_rich Low_complexity Low_complexity 1 40 0 6 1038 24 32 0 0 chrX 59479316 59479347 -107170949 + AT_rich Low_complexity Low_complexity 1 31 0 6 1038 294 387 0 0 chrX 59479437 59479556 -107170740 - Lx8 LINE L1 -241 7232 7114 6 1038 2040 307 16 11 chrX 59479627 59479771 -107170525 - Lx8 LINE L1 -618 6855 6708 6 1038 2548 36 0 0 chrX 59479771 59480078 -107170218 - L1Md_T LINE L1 0 6582 6276 6 1038 2040 307 16 11 chrX 59480078 59480568 -107169728 - Lx8 LINE L1 -766 6707 6219 6 1038 30 59 0 0 chrX 59480593 59480644 -107169652 + AT_rich Low_complexity Low_complexity 1 51 0 6 1038 219 139 0 0 chrX 59481777 59481813 -107168483 + (TGGG)n Simple_repeat Simple_repeat 4 39 0 6 1038 400 185 54 11 chrX 59481827 59481920 -107168376 + Lx4B LINE L1 6959 7055 -3 6 1038 23 0 0 0 chrX 59481923 59481946 -107168350 + AT_rich Low_complexity Low_complexity 1 23 0 6 1038 192 77 0 0 chrX 59482103 59482129 -107168167 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 1038 450 0 0 0 chrX 59482374 59482424 -107167872 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1038 293 195 82 35 chrX 59482502 59482587 -107167709 - PB1D7 SINE Alu -17 103 15 6 1038 816 11 0 0 chrX 59482709 59482802 -107167494 + (TC)n Simple_repeat Simple_repeat 2 94 0 6 1038 263 197 29 29 chrX 59483144 59483212 -107167084 - L1_Mur3 LINE L1 -534 5346 5279 6 1038 354 244 41 72 chrX 59483281 59483475 -107166821 - Lx7 LINE L1 -3 7693 7506 6 1038 777 248 44 0 chrX 59483670 59483876 -107166420 - L1_Mur3 LINE L1 -1789 4091 3877 6 1038 442 240 77 8 chrX 59484335 59484465 -107165831 + B1F SINE Alu 1 139 -10 6 1038 539 294 8 0 chrX 59484700 59484819 -107165477 + RSINE1 SINE B4 6 125 -40 6 1038 476 272 43 14 chrX 59484835 59484973 -107165323 - MER20 DNA MER1_type -43 176 35 6 1038 1240 27 0 0 chrX 59485372 59485518 -107164778 + B1_Mm SINE Alu 1 146 -1 6 1038 333 206 0 0 chrX 59485668 59485770 -107164526 + GA-rich Low_complexity Low_complexity 1 102 0 6 1038 584 103 0 0 chrX 59485877 59485955 -107164341 - Lx LINE L1 -407 6247 6170 6 1038 2547 114 39 5 chrX 59485955 59486344 -107163952 + Lx LINE L1 6251 6652 -2 6 1038 266 250 105 0 chrX 59486430 59486506 -107163790 + MamGypLTR1d LTR Gypsy 714 807 -6 6 1038 196 314 246 0 chrX 59486578 59486696 -107163600 - L2b LINE L2 -9 3366 3220 6 1038 243 114 0 0 chrX 59487827 59487871 -107162425 + (T)n Simple_repeat Simple_repeat 1 44 0 6 1038 302 360 13 41 chrX 59487999 59488179 -107162117 + MER20 DNA MER1_type 2 178 -605 6 1038 1104 253 12 0 chrX 59488207 59488448 -107161848 + Lx5 LINE L1 6807 7050 0 6 1038 4343 50 0 0 chrX 59489053 59489578 -107160718 - L1Md_T LINE L1 -1 6581 6057 6 1038 1603 50 0 0 chrX 59489578 59489776 -107160520 + L1Md_T LINE L1 5873 6070 -512 6 1038 4420 97 9 5 chrX 59489792 59490423 -107159873 - L1_Mus2 LINE L1 0 6566 5933 6 1038 337 308 128 0 chrX 59490469 59490586 -107159710 - ID_B1 SINE B4 -9 215 84 6 1038 468 0 0 0 chrX 59490871 59490923 -107159373 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 1038 261 251 92 20 chrX 59490923 59491034 -107159262 + B3 SINE B2 51 175 -20 6 1038 339 293 58 18 chrX 59491401 59491627 -107158669 - L1M5 LINE L1 -1538 4608 4374 6 1038 417 39 0 0 chrX 59491905 59491956 -107158340 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1038 26 64 0 0 chrX 59493065 59493112 -107157184 + AT_rich Low_complexity Low_complexity 1 47 0 6 1038 17520 75 8 3 chrX 59493142 59496224 -107154072 - L1Md_F2 LINE L1 -2 6580 3484 6 1038 1731 73 0 0 chrX 59496199 59496447 -107153849 - L1Md_F2 LINE L1 -4255 1628 1381 6 1038 5661 5 0 0 chrX 59496442 59497070 -107153226 + L1Md_A LINE L1 5895 6522 -60 6 1038 205 302 16 0 chrX 59497078 59497141 -107153155 + (TG)n Simple_repeat Simple_repeat 2 65 0 6 1038 24 100 0 0 chrX 59497971 59498051 -107152245 + AT_rich Low_complexity Low_complexity 1 80 0 6 1038 220 209 45 0 chrX 59498150 59498217 -107152079 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 1038 556 284 14 54 chrX 59498249 59498472 -107151824 + B3 SINE B2 2 215 -1 6 1038 243 88 0 0 chrX 59498632 59498666 -107151630 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 6 1038 1145 102 0 0 chrX 59498667 59498824 -107151472 - B2_Mm2 SINE B2 -37 158 2 6 1038 3255 161 10 3 chrX 59498825 59499400 -107150896 - L1_Mur2 LINE L1 -630 5247 4669 6 1038 2724 188 19 23 chrX 59499390 59499429 -107150867 + L1_Mur2 LINE L1 5244 5287 -590 6 1038 240 35 0 0 chrX 59499429 59499458 -107150838 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 6 1038 2724 188 19 23 chrX 59499458 59499994 -107150302 + L1_Mur2 LINE L1 5288 5816 -61 6 1038 2545 224 36 30 chrX 59500000 59501247 -107149049 + Lx4B LINE L1 5830 7021 -37 1 1038 4858 144 57 7 chrX 59501272 59502115 -107148181 - Lx4A LINE L1 0 7058 6174 2 1038 438 276 79 68 chrX 59502922 59503380 -107146916 - L1M4 LINE L1 -1750 4396 3934 3 1038 420 20 0 0 chrX 59503381 59503430 -107146866 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 4 1038 431 354 38 46 chrX 59503711 59503951 -107146345 - MT2A LTR ERVL -295 238 1 5 1038 401 289 50 34 chrX 59504161 59504479 -107145817 + Lx5 LINE L1 6129 6563 -487 6 1038 647 297 163 11 chrX 59504480 59505031 -107145265 + Lx9 LINE L1 6918 7552 -92 7 1039 327 273 79 35 chrX 59507118 59507232 -107143064 - ID_B1 SINE B4 -4 220 102 8 1039 840 234 0 0 chrX 59507982 59508351 -107141945 + GA-rich Low_complexity Low_complexity 1 369 0 9 1039 1158 82 0 0 chrX 59510972 59511131 -107139165 + (GGAGA)n Simple_repeat Simple_repeat 3 161 0 1 1039 331 366 69 52 chrX 59511549 59511782 -107138514 + MLT1A1 LTR MaLR 92 328 -80 1 1039 1193 275 66 0 chrX 59513246 59513639 -107136657 - MTD LTR MaLR 0 419 1 1 1039 2225 178 6 54 chrX 59513701 59514199 -107136097 + L1VL2 LINE L1 470 943 -5691 1 1039 7926 30 0 0 chrX 59514201 59515176 -107135120 + L1Md_F3 LINE L1 5587 6561 -23 1 1039 351 0 0 0 chrX 59515176 59515215 -107135081 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 1039 1904 111 6 4 chrX 59515215 59515549 -107134747 + L1VL2 LINE L1 944 1276 -4604 1 1039 481 292 23 98 chrX 59515554 59515957 -107134339 + L1VL1 LINE L1 61 382 -6040 1 1039 380 216 19 10 chrX 59516015 59516118 -107134178 + Lx LINE L1 675 778 -5838 1 1039 20758 173 35 24 chrX 59516130 59521868 -107128428 + Lx LINE L1 725 6538 -116 1 1039 3465 193 84 29 chrX 59521883 59523103 -107127193 - L1VL2 LINE L1 -5290 1045 68 1 1039 34 55 0 0 chrX 59523171 59523226 -107127070 + AT_rich Low_complexity Low_complexity 1 55 0 1 1039 716 263 97 0 chrX 59523419 59523605 -107126691 + MTD LTR MaLR 6 209 -210 2 1039 287 100 0 0 chrX 59523605 59523645 -107126651 - L1_Mus1 LINE L1 -110 6457 6418 2 1039 730 92 0 0 chrX 59523645 59523754 -107126542 + L1_Mus1 LINE L1 6459 6567 0 2 1039 673 285 45 32 chrX 59523776 59523997 -107126299 + MTD LTR MaLR 196 419 0 2 1039 545 103 23 23 chrX 59524194 59524324 -107125972 + (TCTA)n Simple_repeat Simple_repeat 1 130 0 2 1039 912 130 106 0 chrX 59524358 59524519 -107125777 - B2_Mm2 SINE B2 -17 178 1 2 1039 420 344 6 25 chrX 59524531 59524692 -107125604 - MTD LTR MaLR -220 199 42 2 1039 1218 110 0 0 chrX 59524841 59525087 -107125209 + (TTTCC)n Simple_repeat Simple_repeat 1 246 0 2 1039 657 69 0 0 chrX 59525087 59525174 -107125122 + (TTCC)n Simple_repeat Simple_repeat 2 88 0 2 1039 186 103 0 0 chrX 59525174 59525203 -107125093 + (TC)n Simple_repeat Simple_repeat 2 30 0 2 1039 7116 139 18 12 chrX 59525216 59526365 -107123931 - Lx3B LINE L1 -2 6971 5816 2 1039 3081 107 0 39 chrX 59526365 59526852 -107123444 + Lx3B LINE L1 5333 5800 -86 2 1039 261 0 0 0 chrX 59526895 59526924 -107123372 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1039 1185 292 23 38 chrX 59526928 59527402 -107122894 - Lx7 LINE L1 -384 7312 6846 3 1039 409 220 178 12 chrX 59527392 59527645 -107122651 + L1_Mur3 LINE L1 5110 5404 -476 3 1039 334 242 121 0 chrX 59527659 59527791 -107122505 - Lx4B LINE L1 -9 7049 6902 3 1039 951 71 0 21 chrX 59527791 59527935 -107122361 + L1Md_F3 LINE L1 6443 6583 -1 3 1039 255 167 0 0 chrX 59527984 59528026 -107122270 - Lx5 LINE L1 -167 6883 6842 3 1039 1114 214 46 4 chrX 59527998 59528260 -107122036 - Lx2B LINE L1 -203 6797 6525 3 1039 3081 188 161 69 chrX 59528262 59529077 -107121219 + RMER19B LTR ERVK 1 890 -12 3 1039 2992 210 91 28 chrX 59529086 59529870 -107120426 - Lx4B LINE L1 -528 6530 5698 3 1039 2179 96 7 3 chrX 59529876 59530179 -107120117 + L1_Mus3 LINE L1 6329 6632 -6 3 1039 1338 73 0 0 chrX 59530192 59530371 -107119925 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 3 1039 2096 89 10 7 chrX 59530391 59530686 -107119610 + ORR1A2 LTR MaLR 32 327 0 3 1039 1793 276 45 33 chrX 59530690 59531360 -107118936 + Lx9 LINE L1 6774 7451 -193 4 1039 1414 262 181 40 chrX 59531365 59532329 -107117967 + Lx7 LINE L1 6223 7321 -375 4 1039 468 0 0 0 chrX 59532329 59532381 -107117915 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1039 1134 265 72 45 chrX 59532381 59532423 -107117873 + Lx7 LINE L1 7322 7366 -330 4 1039 338 42 21 0 chrX 59532842 59532890 -107117406 + (TTTTG)n Simple_repeat Simple_repeat 5 53 0 4 1039 1571 71 0 0 chrX 59533445 59533656 -107116640 + L1_Mus2 LINE L1 6356 6566 0 4 1039 297 0 0 0 chrX 59533680 59533713 -107116583 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1039 777 61 97 0 chrX 59533724 59533838 -107116458 + B1_Mus1 SINE Alu 24 148 0 4 1039 810 120 0 36 chrX 59533943 59534081 -107116215 - L1_Mus2 LINE L1 -14 6552 6420 4 1039 881 266 5 0 chrX 59537216 59537408 -107112888 - B3 SINE B2 -22 194 2 4 1039 22 35 0 0 chrX 59540025 59540054 -107110242 + AT_rich Low_complexity Low_complexity 1 29 0 4 1039 1203 81 0 0 chrX 59540054 59540215 -107110081 - L1_Mus1 LINE L1 -1 6566 6406 5 1039 186 43 0 0 chrX 59541742 59541765 -107108531 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1039 206 209 0 0 chrX 59542913 59542956 -107107340 + (TGAA)n Simple_repeat Simple_repeat 2 44 0 5 1039 183 204 0 0 chrX 59543751 59543795 -107106501 + GA-rich Low_complexity Low_complexity 1 44 0 5 1039 275 177 0 16 chrX 59543898 59543961 -107106335 + CT-rich Low_complexity Low_complexity 1 62 0 5 1039 6509 116 22 13 chrX 59546996 59548116 -107102180 - Lx LINE L1 0 6654 5525 5 1039 1962 119 65 12 chrX 59548154 59548478 -107101818 + Lx3B LINE L1 6629 6969 -4 5 1039 5914 111 30 6 chrX 59550320 59551340 -107098956 + L1VL4 LINE L1 17 1070 -2489 5 1039 195 42 0 0 chrX 59551340 59551364 -107098932 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1039 4425 78 26 28 chrX 59551364 59551885 -107098411 + L1VL4 LINE L1 1071 1586 -1973 5 1039 180 0 0 0 chrX 59551931 59551951 -107098345 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 5 1039 3264 200 60 3 chrX 59552024 59552719 -107097577 + RMER1B Other Other 2 1055 -11 6 1039 351 324 107 71 chrX 59552822 59553301 -107096995 + L1ME1 LINE L1 4225 4721 -1425 6 1039 637 332 9 77 chrX 59553530 59553752 -107096544 + B4 SINE B4 1 207 -85 6 1039 596 232 25 96 chrX 59553792 59553949 -107096347 + B3A SINE B2 11 156 -42 6 1039 944 218 66 29 chrX 59553971 59554245 -107096051 - Lx5 LINE L1 -1031 6019 5736 6 1039 285 29 0 0 chrX 59554245 59554279 -107096017 + (TTA)n Simple_repeat Simple_repeat 2 35 0 6 1039 663 350 60 3 chrX 59554293 59554645 -107095651 + Lx5 LINE L1 6058 6429 -621 6 1039 2972 113 2 5 chrX 59554684 59555119 -107095177 + RLTR10C LTR ERVK 1 434 -2 6 1039 1080 142 11 11 chrX 59555123 59555301 -107094995 + B2_Mm1t SINE B2 2 179 -14 6 1039 335 109 323 17 chrX 59555348 59555459 -107094837 + B2_Mm2 SINE B2 47 191 -4 6 1039 300 276 242 11 chrX 59555533 59555797 -107094499 + L1ME1 LINE L1 5648 5972 -207 6 1039 327 164 33 0 chrX 59555839 59555900 -107094396 + RMER1C Other Other 1060 1122 -220 7 1039 18262 96 12 6 chrX 59555907 59559189 -107091107 - L1Md_F2 LINE L1 0 6582 3277 7 1039 871 131 48 7 chrX 59559188 59559334 -107090962 - L1Md_F LINE L1 -6088 431 280 7 1039 5899 104 15 37 chrX 59559360 59560885 -107089411 - L1Md_F2 LINE L1 -4046 1837 353 7 1039 374 273 0 9 chrX 59560888 59560999 -107089297 + RMER1C Other Other 1116 1225 -117 7 1039 678 210 0 14 chrX 59561010 59561150 -107089146 + RMER1C Other Other 1201 1338 -4 7 1039 363 331 110 0 chrX 59561172 59561308 -107088988 + ORR1D2 LTR MaLR 9 159 -211 7 1039 2904 218 88 14 chrX 59561308 59561947 -107088349 + Lx6 LINE L1 6735 7420 -40 7 1039 5655 187 32 4 chrX 59561942 59563050 -107087246 + L1_Mur1 LINE L1 4748 5886 0 7 1039 2526 64 61 0 chrX 59563067 59563393 -107086903 - ORR1A1 LTR MaLR 0 346 1 7 1039 10346 75 2 3 chrX 59563393 59564857 -107085439 - ORR1A1-int LTR MaLR 0 1963 382 7 1039 1790 47 0 17 chrX 59564857 59565095 -107085201 + L1Md_F2 LINE L1 6349 6582 0 7 1039 9820 158 33 45 chrX 59565095 59565617 -107084679 - ORR1A1-int LTR MaLR -1508 455 1 7 1039 2571 52 65 0 chrX 59565617 59565942 -107084354 - ORR1A1 LTR MaLR 0 346 1 7 1039 5844 165 31 21 chrX 59565942 59567036 -107083260 + Lx2B LINE L1 5896 7000 0 7 1039 498 238 161 30 chrX 59567071 59567270 -107083026 + ORR1D2 LTR MaLR 144 368 -2 7 1039 1057 101 0 0 chrX 59569070 59569209 -107081087 - B1_Mus1 SINE Alu -9 139 1 8 1039 31 76 0 0 chrX 59569324 59569390 -107080906 + AT_rich Low_complexity Low_complexity 1 66 0 8 1039 376 186 0 0 chrX 59569475 59569545 -107080751 + RMER6C LTR ERVK 614 683 -7 8 1039 548 309 0 7 chrX 59570703 59570843 -107079453 - Lx9 LINE L1 -1137 6507 6369 8 1039 381 22 0 0 chrX 59570873 59570919 -107079377 + (TG)n Simple_repeat Simple_repeat 2 47 0 8 1039 255 223 84 11 chrX 59570951 59571046 -107079250 - Lx5 LINE L1 -1149 5901 5800 8 1039 1757 271 86 32 chrX 59571053 59571317 -107078979 - Lx9 LINE L1 -268 5579 5317 8 1039 1167 266 81 3 chrX 59571317 59571664 -107078632 + ORR1D1 LTR MaLR 1 374 0 8 1039 1757 271 86 32 chrX 59571664 59572119 -107078177 - Lx9 LINE L1 -531 5316 4821 8 1039 618 205 53 29 chrX 59572121 59572292 -107078004 - URR1A DNA MER1_type -14 212 38 8 1039 254 278 22 0 chrX 59572292 59572382 -107077914 - L1_Mur3 LINE L1 -1724 4156 4065 8 1039 877 276 35 3 chrX 59572371 59572683 -107077613 - L1_Rod LINE L1 -6291 881 560 8 1039 291 277 37 30 chrX 59572792 59572926 -107077370 + L1MB8 LINE L1 5754 5888 -290 9 1039 348 356 56 6 chrX 59573209 59573387 -107076909 + L1M4 LINE L1 3428 3614 -2532 9 1039 349 397 25 6 chrX 59573563 59573720 -107076576 + RSINE1 SINE B4 5 164 -1 9 1039 373 394 74 14 chrX 59573759 59574124 -107076172 + L1M4 LINE L1 3726 4112 -2034 9 1039 2953 49 5 42 chrX 59574448 59574851 -107075445 + RLTR10 LTR ERVK 1 388 -2 9 1039 216 0 0 0 chrX 59574860 59574884 -107075412 + (A)n Simple_repeat Simple_repeat 1 24 0 9 1039 712 163 0 8 chrX 59575218 59575342 -107074954 + B1_Mus1 SINE Alu 5 127 -21 9 1039 1001 296 96 42 chrX 59576785 59577388 -107072908 + L1MC2 LINE L1 5627 6262 -82 9 1039 227 347 73 62 chrX 59577753 59577931 -107072365 + ORR1E LTR MaLR 179 358 -1 9 1039 1095 55 7 20 chrX 59577957 59578106 -107072190 + B1_Mus1 SINE Alu 2 148 0 9 1039 445 233 53 30 chrX 59578312 59578445 -107071851 + ORR1D1 LTR MaLR 9 144 -230 9 1039 2115 114 9 0 chrX 59578484 59578800 -107071496 - ORR1A2 LTR MaLR -8 319 1 1 1039 10604 145 47 20 chrX 59578800 59580713 -107069583 - ORR1A2-int LTR MaLR 0 1963 1 1 1039 2297 97 0 6 chrX 59580717 59581038 -107069258 - ORR1A2 LTR MaLR -8 319 1 1 1039 706 260 58 31 chrX 59581038 59581251 -107069045 + ORR1D1 LTR MaLR 156 374 0 9 1039 393 301 43 17 chrX 59581839 59581954 -107068342 + B1F SINE Alu 7 124 -25 1 1039 1526 53 14 9 chrX 59581964 59582164 -107068132 + L1Md_F3 LINE L1 6359 6560 -24 1 1039 297 0 0 0 chrX 59582164 59582197 -107068099 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 1039 232 207 0 17 chrX 59582250 59582309 -107067987 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 1039 1381 197 20 23 chrX 59583946 59584247 -107066049 - Lx9 LINE L1 -445 7199 6900 1 1039 1481 212 146 0 chrX 59584230 59584487 -107065809 + Lx9 LINE L1 7178 7469 -175 1 1039 324 70 0 0 chrX 59584487 59584530 -107065766 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1039 1481 212 146 0 chrX 59584530 59584677 -107065619 + Lx9 LINE L1 7470 7640 -4 1 1039 21 0 0 0 chrX 59584685 59584706 -107065590 + AT_rich Low_complexity Low_complexity 1 21 0 1 1039 4632 140 33 8 chrX 59584812 59586191 -107064105 + L1Md_F2 LINE L1 214 1620 -4263 1 1039 13778 76 0 4 chrX 59586188 59588104 -107062192 + L1Md_F2 LINE L1 4066 5976 -606 1 1039 1522 91 0 18 chrX 59588104 59588329 -107061967 + L1Md_F2 LINE L1 6349 6569 -13 1 1039 483 18 0 0 chrX 59588331 59588387 -107061909 + (GAA)n Simple_repeat Simple_repeat 2 57 0 1 1039 195 42 0 0 chrX 59588387 59588411 -107061885 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1 1039 464 315 16 8 chrX 59588487 59588615 -107061681 + RSINE1 SINE B4 1 129 -36 1 1039 10455 89 14 6 chrX 59588615 59590079 -107060217 + RMER16-int LTR ERVK 3828 5303 -103 1 1039 459 156 0 0 chrX 59590160 59590237 -107060059 + RMER16-int LTR ERVK 5330 5406 0 1 1039 2236 176 76 61 chrX 59590237 59590762 -107059534 + RMER16 LTR ERVK 1 533 0 1 1039 266 137 78 0 chrX 59590775 59590826 -107059470 + ORR1C1 LTR MaLR 324 378 0 1 1039 228 286 14 14 chrX 59591531 59591602 -107058694 - Lx8 LINE L1 -299 7174 7104 1 1039 575 325 28 28 chrX 59591824 59592042 -107058254 - ID_B1 SINE B4 -6 218 1 1 1039 3758 119 9 16 chrX 59593240 59594069 -107056227 + L1Md_F LINE L1 411 1219 -5505 1 1039 5595 63 1 3 chrX 59594069 59594788 -107055508 + L1Md_F2 LINE L1 5862 6579 -3 1 1039 581 329 85 97 chrX 59595221 59595736 -107054560 + Charlie1a DNA MER1_type 7 515 -940 1 1039 590 307 50 25 chrX 59595733 59596054 -107054242 + Charlie1a DNA MER1_type 969 1297 -158 1 1039 1502 276 12 26 chrX 59596071 59596407 -107053889 + Lx6 LINE L1 6987 7318 -142 1 1039 237 33 0 0 chrX 59596407 59596437 -107053859 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 1039 1502 276 12 26 chrX 59596437 59596517 -107053779 + Lx6 LINE L1 7319 7397 -63 1 1039 1597 189 74 0 chrX 59596536 59596832 -107053464 + L1VL2 LINE L1 283 600 -5735 1 1039 6726 137 28 53 chrX 59596854 59598927 -107051369 + L1VL2 LINE L1 300 2309 -1605 1 1039 1024 139 58 16 chrX 59598929 59599145 -107051151 + L1VL2 LINE L1 2560 2786 -3094 1 1039 286 291 63 0 chrX 59599146 59599225 -107051071 + MT2B LTR ERVL 62 145 -456 1 1039 1452 205 16 13 chrX 59599270 59599577 -107050719 + MT2B LTR ERVL 275 582 -19 1 1039 1233 257 57 32 chrX 59599731 59600101 -107050195 - MTE2a LTR MaLR 0 379 1 1 1039 229 361 110 39 chrX 59600194 59600321 -107049975 + MLT1D LTR MaLR 287 422 -83 1 1039 405 335 128 6 chrX 59601125 59601281 -107049015 - MER20 DNA MER1_type -44 175 1 1 1039 309 135 0 0 chrX 59601591 59601643 -107048653 - U5 snRNA snRNA -64 52 1 1 1039 853 310 95 106 chrX 59601948 59602504 -107047792 + Lx8 LINE L1 6584 7133 -340 1 1039 2412 169 57 20 chrX 59602514 59603022 -107047274 - RMER6A LTR ERVK 0 756 230 1 1039 1699 276 20 42 chrX 59603158 59603661 -107046635 - RLTR16 LTR ERVK -12 493 2 1 1039 1432 144 35 11 chrX 59603661 59603895 -107046401 - RMER6A LTR ERVK -516 240 1 1 1039 1638 165 20 80 chrX 59604110 59604460 -107045836 - ORR1A4 LTR MaLR 0 329 1 1 1039 375 46 30 30 chrX 59605056 59605123 -107045173 + (CAAAA)n Simple_repeat Simple_repeat 5 71 0 1 1039 1726 224 55 43 chrX 59605216 59605899 -107044397 + L1_Mur1 LINE L1 18 959 -6023 1 1039 33399 106 9 14 chrX 59605890 59611780 -107038516 + L1Md_A LINE L1 31 5869 -14 1 1039 29683 107 24 35 chrX 59611771 59616842 -107033454 + Lx3_Mus LINE L1 939 5980 -1029 1 1039 2872 98 7 9 chrX 59616842 59617264 -107033032 + BGLII LTR ERVK 1 421 0 1 1039 7809 123 19 17 chrX 59617264 59618135 -107032161 + Lx3_Mus LINE L1 5981 6849 -160 1 1039 1978 159 26 11 chrX 59618135 59618485 -107031811 + Lx2A1 LINE L1 6646 7000 -8 1 1039 397 208 0 13 chrX 59618522 59618600 -107031696 + Lx7 LINE L1 7277 7353 -343 1 1039 203 169 51 0 chrX 59618626 59618685 -107031611 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 1039 923 134 8 0 chrX 59618702 59618836 -107031460 + B1_Mm SINE Alu 1 135 -12 1 1039 482 62 16 0 chrX 59618837 59618901 -107031395 + B1_Mm SINE Alu 71 135 -12 1 1039 535 103 13 0 chrX 59618894 59618972 -107031324 + B1_Mm SINE Alu 63 141 -6 1 1039 207 0 0 0 chrX 59618974 59618997 -107031299 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1 1039 405 0 0 0 chrX 59619006 59619051 -107031245 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 1039 279 0 0 0 chrX 59619051 59619081 -107031215 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1039 992 237 75 54 chrX 59619100 59619434 -107030862 + Lx7 LINE L1 7356 7696 0 1 1039 230 298 27 0 chrX 59619609 59619691 -107030605 + MIRm SINE MIR 97 180 -88 1 1039 2729 48 96 0 chrX 59619844 59620198 -107030098 + RLTR10 LTR ERVK 1 388 -2 1 1039 2115 50 4 0 chrX 59620210 59620470 -107029826 + RLTR10-int LTR ERVK 41 301 -1686 1 1039 1396 190 140 85 chrX 59620481 59620743 -107029553 + RMER6B LTR ERVK 1 278 -183 1 1039 249 0 73 0 chrX 59620743 59620784 -107029512 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 1039 1396 190 140 85 chrX 59620784 59620958 -107029338 + RMER6B LTR ERVK 279 461 0 1 1039 591 314 31 16 chrX 59621141 59621308 -107028988 + B3A SINE B2 45 208 -8 1 1039 439 356 0 7 chrX 59621347 59621494 -107028802 + B1F SINE Alu 1 146 -3 1 1039 375 23 0 0 chrX 59622011 59622055 -107028241 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 1 1039 988 140 43 11 chrX 59623142 59623330 -107026966 - Lx3_Mus LINE L1 -6 7003 6810 1 1039 934 166 0 0 chrX 59623333 59623496 -107026800 + MusHAL1 LINE L1 256 418 -2936 1 1039 2420 152 8 92 chrX 59623478 59623969 -107026327 - L1_Mm LINE L1 -163 5720 5271 1 1039 5536 144 42 15 chrX 59623969 59624972 -107025324 + Lx3C LINE L1 5945 6974 -2 1 1039 396 0 0 0 chrX 59624977 59625021 -107025275 + (TAAAA)n Simple_repeat Simple_repeat 3 46 0 1 1039 1225 87 12 0 chrX 59625038 59625210 -107025086 + MT2B2 LTR ERVL 341 514 -70 1 1039 183 184 0 0 chrX 59625411 59625449 -107024847 + GA-rich Low_complexity Low_complexity 2 39 0 1 1039 222 246 49 0 chrX 59626306 59626367 -107023929 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 1 1039 780 329 67 39 chrX 59626505 59626938 -107023358 - MLT1C LTR MaLR -22 445 1 1 1039 393 75 0 0 chrX 59629602 59629655 -107020641 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 1039 469 327 64 48 chrX 59629708 59630273 -107020023 - L1MA5A LINE L1 -435 5862 5289 1 1039 1218 100 0 0 chrX 59630464 59630644 -107019652 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 1039 4722 241 35 20 chrX 59630719 59631899 -107018397 - Lx7 LINE L1 -279 7417 6221 1 1039 180 0 0 0 chrX 59633078 59633098 -107017198 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1 1039 398 190 0 12 chrX 59633099 59633184 -107017112 - Lx3C LINE L1 -6 6970 6887 1 1039 405 0 0 0 chrX 59633984 59634029 -107016267 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1039 349 338 22 14 chrX 59634417 59634555 -107015741 + MLT1E2 LTR MaLR 13 151 -476 1 1039 2834 32 0 6 chrX 59635355 59635699 -107014597 + L1Md_F3 LINE L1 6241 6582 -2 1 1039 1037 75 0 0 chrX 59635832 59635966 -107014330 + B1_Mus2 SINE Alu 1 134 -13 1 1039 663 78 0 0 chrX 59635966 59636056 -107014240 + (GAAA)n Simple_repeat Simple_repeat 3 92 0 1 1039 975 56 0 0 chrX 59636132 59636258 -107014038 - B1_Mus1 SINE Alu -2 146 21 1 1039 333 253 192 35 chrX 59636631 59636803 -107013493 - RMER15 LTR ERVL -53 522 324 1 1039 236 279 24 71 chrX 59637043 59637128 -107013168 + RMER30 DNA MER1_type 100 180 -22 1 1039 183 156 0 0 chrX 59637200 59637232 -107013064 + CT-rich Low_complexity Low_complexity 3 34 0 1 1039 291 281 64 53 chrX 59637556 59637650 -107012646 + PB1D10 SINE Alu 22 116 -1 1 1040 534 16 0 0 chrX 59637764 59637827 -107012469 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1040 22 70 0 0 chrX 59639126 59639169 -107011127 + AT_rich Low_complexity Low_complexity 1 43 0 1 1040 343 216 47 16 chrX 59639175 59639302 -107010994 + Lx7 LINE L1 5693 5823 -1873 1 1040 930 282 31 45 chrX 59639317 59639736 -107010560 + L1_Rod LINE L1 4804 5216 -631 1 1040 2288 64 35 6 chrX 59640017 59640333 -107009963 + L1Md_F2 LINE L1 5262 5586 -297 1 1040 8030 52 2 5 chrX 59640334 59641332 -107008964 + L1Md_F2 LINE L1 5588 6582 0 1 1040 244 226 0 0 chrX 59641343 59641405 -107008891 + A-rich Low_complexity Low_complexity 1 62 0 1 1040 229 173 105 58 chrX 59642111 59642197 -107008099 + MTEb LTR MaLR 290 379 0 1 1040 1335 316 102 16 chrX 59642562 59643179 -107007117 + Lx8 LINE L1 6804 7473 0 1 1040 241 206 150 88 chrX 59643352 59643432 -107006864 - MER53 DNA hAT -23 170 86 1 1040 236 338 56 21 chrX 59643610 59643752 -107006544 - MER5A DNA MER1_type 0 189 43 1 1040 4387 258 149 18 chrX 59644532 59646213 -107004083 - Lx9 LINE L1 0 7644 5690 1 1040 270 330 128 32 chrX 59646495 59646589 -107003707 - B4 SINE B4 -184 108 6 1 1040 235 246 0 0 chrX 59646663 59646720 -107003576 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 1040 254 369 45 9 chrX 59646720 59646832 -107003464 - PB1D10 SINE Alu -1 116 1 1 1040 397 180 35 11 chrX 59647374 59647548 -107002748 + (TA)n Simple_repeat Simple_repeat 1 178 0 1 1040 426 294 0 0 chrX 59649320 59649422 -107000874 - PB1D9 SINE Alu -16 104 3 1 1040 22 35 0 0 chrX 59649767 59649796 -107000500 + AT_rich Low_complexity Low_complexity 1 29 0 1 1040 22 35 0 0 chrX 59650390 59650419 -106999877 + AT_rich Low_complexity Low_complexity 1 29 0 1 1040 542 333 15 0 chrX 59650515 59650713 -106999583 - B3 SINE B2 -15 201 1 1 1040 2308 120 3 84 chrX 59651102 59651493 -106998803 - RLTR10D LTR ERVK 0 359 1 1 1040 3238 82 2 0 chrX 59651493 59651907 -106998389 - IAP-d-int LTR ERVK 0 6542 6128 1 1040 22528 52 10 17 chrX 59651910 59654764 -106995532 - IAP-d-int LTR ERVK -521 6021 3188 1 1040 3323 59 9 7 chrX 59654831 59655258 -106995038 - IAP-d-int LTR ERVK -5803 739 312 1 1040 467 92 0 30 chrX 59655261 59655328 -106994968 - IAP-d-int LTR ERVK -6477 65 1 1 1040 2365 117 3 75 chrX 59655328 59655715 -106994581 - RLTR10D LTR ERVK 0 359 1 1 1040 2136 236 30 17 chrX 59655990 59656516 -106993780 + L1_Rod LINE L1 5315 5847 0 1 1040 937 277 118 9 chrX 59656520 59656852 -106993444 - MTD LTR MaLR -49 370 3 1 1040 1105 75 0 0 chrX 59656866 59657013 -106993283 - B1_Mus1 SINE Alu 0 148 2 1 1040 26 30 0 0 chrX 59657061 59657094 -106993202 + AT_rich Low_complexity Low_complexity 1 33 0 2 1040 278 280 30 0 chrX 59657321 59657421 -106992875 + L1MEe LINE L1 181 283 -4571 2 1040 2466 193 89 28 chrX 59657515 59658044 -106992252 - RMER4B LTR ERVK -6 579 19 2 1040 406 55 55 0 chrX 59658046 59658101 -106992195 - Lx3B LINE L1 -257 6716 6659 2 1040 1400 151 35 8 chrX 59658101 59658350 -106991946 + Lx3B LINE L1 6707 6964 -9 2 1040 182 33 0 62 chrX 59658350 59658382 -106991914 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 2 1040 458 261 0 0 chrX 59658434 59658564 -106991732 + Lx9 LINE L1 7493 7622 -22 2 1040 3362 252 14 34 chrX 59658691 59659521 -106990775 + Lx6 LINE L1 6478 7291 -169 2 1040 8366 28 7 1 chrX 59659865 59660855 -106989441 - L1Md_F3 LINE L1 -1 6583 5588 2 1040 426 99 59 0 chrX 59661255 59661356 -106988940 + (TCTG)n Simple_repeat Simple_repeat 2 108 0 2 1040 609 14 0 0 chrX 59661358 59661428 -106988868 + (CA)n Simple_repeat Simple_repeat 1 70 0 2 1040 295 133 53 0 chrX 59661445 59661520 -106988776 + (CAGAGA)n Simple_repeat Simple_repeat 4 82 0 2 1040 282 293 35 35 chrX 59661548 59661693 -106988603 - L1MEc LINE L1 -2451 3868 3724 2 1040 304 341 0 0 chrX 59661814 59661940 -106988356 - L1MEc LINE L1 -4310 2090 1965 2 1040 1428 291 73 18 chrX 59662210 59662700 -106987596 + RMER5 LTR ERV1 1 517 -17 2 1040 186 245 40 20 chrX 59663445 59663495 -106986801 - L3 LINE CR1 -3614 875 825 2 1040 303 28 0 0 chrX 59664478 59664514 -106985782 + (TTA)n Simple_repeat Simple_repeat 1 36 0 2 1040 1378 172 51 4 chrX 59664514 59664771 -106985525 - Lx4A LINE L1 -8 7050 6782 2 1040 529 273 26 176 chrX 59664992 59665219 -106985077 + MTE2b LTR MaLR 3 195 -184 2 1040 361 320 39 29 chrX 59665232 59665512 -106984784 - L1M2 LINE L1 -560 5731 5449 2 1040 186 240 0 0 chrX 59665538 59665588 -106984708 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1040 453 311 88 48 chrX 59665672 59665918 -106984378 - L1MC4a LINE L1 -80 7802 7541 2 1040 492 225 163 0 chrX 59665918 59666047 -106984249 - B1_Mur4 SINE Alu 0 150 1 2 1040 453 311 88 48 chrX 59666047 59666279 -106984017 - L1MC4a LINE L1 -342 7540 7305 2 1040 23 54 0 0 chrX 59666283 59666320 -106983976 + AT_rich Low_complexity Low_complexity 1 37 0 2 1040 261 109 0 0 chrX 59666396 59666442 -106983854 + (ATTAG)n Simple_repeat Simple_repeat 5 50 0 2 1040 3434 259 92 115 chrX 59666680 59667414 -106982882 + Lx6 LINE L1 5995 6738 -722 2 1040 3179 92 118 2 chrX 59667414 59667895 -106982401 - L1_Mus3 LINE L1 -7 6631 6095 2 1040 3434 259 92 115 chrX 59667895 59667961 -106982335 + Lx6 LINE L1 6739 6814 -646 2 1040 3385 169 15 41 chrX 59667961 59668615 -106981681 + Lx2B LINE L1 6361 6997 -3 2 1040 1231 34 0 0 chrX 59668620 59668767 -106981529 + B1_Mm SINE Alu 1 147 0 2 1040 3434 259 92 115 chrX 59668767 59669397 -106980899 + Lx6 LINE L1 6815 7399 -61 2 1040 211 385 57 37 chrX 59669405 59669702 -106980594 - L2 LINE L2 -650 2769 2467 2 1040 1188 123 14 51 chrX 59670087 59670302 -106979994 - Lx4A LINE L1 -1000 6058 5852 2 1040 282 125 0 0 chrX 59670296 59670336 -106979960 + Lx4A LINE L1 6306 6345 -713 2 1040 2136 156 40 86 chrX 59670334 59670811 -106979485 - Lx4A LINE L1 -426 5451 4997 2 1040 6440 163 39 1 chrX 59670811 59671925 -106978371 + Lx4A LINE L1 5900 7055 -3 2 1040 626 230 22 0 chrX 59672280 59672419 -106977877 - B1_Mus1 SINE Alu -6 142 1 2 1040 544 282 14 14 chrX 59674151 59674295 -106976001 + B3A SINE B2 1 140 -53 2 1040 301 149 0 141 chrX 59674341 59674419 -106975877 + HAL1-3A_ME LINE L1 1975 2041 -817 2 1040 22 0 0 0 chrX 59674478 59674500 -106975796 + AT_rich Low_complexity Low_complexity 1 22 0 2 1040 192 40 0 0 chrX 59675626 59675651 -106974645 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1040 440 295 43 87 chrX 59677103 59677311 -106972985 - MLT1A LTR MaLR -62 312 114 2 1040 621 299 31 21 chrX 59677442 59677633 -106972663 - B3A SINE B2 -3 195 3 2 1040 250 315 134 9 chrX 59677693 59677805 -106972491 - MIRb SINE MIR -121 147 22 2 1040 353 309 102 59 chrX 59677814 59678000 -106972296 - MamSINE1 SINE tRNA -95 195 2 2 1040 185 379 31 31 chrX 59678063 59678191 -106972105 - MIR SINE MIR -75 187 60 2 1040 198 71 0 0 chrX 59679355 59679383 -106970913 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 2 1040 22 0 0 0 chrX 59680005 59680027 -106970269 + AT_rich Low_complexity Low_complexity 1 22 0 2 1040 523 290 60 48 chrX 59680182 59680543 -106969753 + L1M2 LINE L1 4653 5006 -841 2 1040 451 199 57 0 chrX 59680542 59680676 -106969620 - L1_Rod LINE L1 -1455 4685 4516 2 1040 645 245 0 28 chrX 59681209 59681352 -106968944 - MT2A LTR ERVL -394 139 1 2 1040 2069 112 14 70 chrX 59681594 59681939 -106968357 + ORR1A3 LTR MaLR 1 326 0 2 1040 414 0 0 0 chrX 59682017 59682063 -106968233 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 1040 3827 43 0 0 chrX 59682063 59682525 -106967771 - L1Md_F2 LINE L1 -19 6563 6102 2 1040 562 278 57 31 chrX 59682649 59682842 -106967454 - MT2A LTR ERVL -301 232 35 2 1040 2588 180 20 2 chrX 59682873 59683330 -106966966 + RMER15 LTR ERVL 1 465 -110 2 1040 190 365 112 37 chrX 59683365 59683854 -106966442 - L2 LINE L2 -522 2897 2372 2 1040 259 404 42 16 chrX 59683868 59684059 -106966237 - MLT1L LTR MaLR -2 608 413 2 1040 264 30 0 0 chrX 59684325 59684358 -106965938 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1040 3130 44 2 32 chrX 59685535 59685937 -106964359 + RLTR10 LTR ERVK 1 390 0 2 1040 195 226 30 61 chrX 59686149 59686215 -106964081 - L3 LINE CR1 -1328 3161 3098 2 1040 187 343 164 20 chrX 59686342 59686488 -106963808 + MIR SINE MIR 65 231 -31 2 1040 27 0 0 0 chrX 59686988 59687015 -106963281 + AT_rich Low_complexity Low_complexity 1 27 0 2 1040 262 339 84 79 chrX 59687545 59688079 -106962217 + L1M4 LINE L1 58 594 -5948 2 1040 541 263 89 63 chrX 59688210 59688592 -106961704 + L1MA10 LINE L1 5936 6327 -7 2 1040 385 267 58 8 chrX 59688613 59688734 -106961562 - Lx6 LINE L1 -688 6772 6646 2 1040 416 266 0 39 chrX 59688734 59688863 -106961433 + Lx6 LINE L1 7311 7434 -26 2 1040 1617 232 29 6 chrX 59689070 59689421 -106960875 - ORR1B2 LTR MaLR -8 359 1 2 1040 687 83 0 0 chrX 59689625 59689733 -106960563 + (GA)n Simple_repeat Simple_repeat 2 109 0 2 1040 6690 114 28 14 chrX 59689928 59691512 -106958784 + L1_Mus3 LINE L1 5014 6616 -22 2 1040 345 389 35 0 chrX 59692296 59692409 -106957887 + RSINE1 SINE B4 49 165 0 2 1040 26 0 0 0 chrX 59692425 59692451 -106957845 + AT_rich Low_complexity Low_complexity 1 26 0 2 1040 251 279 62 12 chrX 59692665 59692745 -106957551 + MIR3 SINE MIR 77 160 -48 2 1040 1250 249 36 12 chrX 59692912 59693246 -106957050 + Lx3C LINE L1 6633 6974 -2 2 1040 24 0 0 0 chrX 59693246 59693270 -106957026 + AT_rich Low_complexity Low_complexity 1 24 0 2 1040 275 146 18 0 chrX 59693331 59693386 -106956910 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 1040 1174 126 0 11 chrX 59693826 59694002 -106956294 + MTB_Mm LTR MaLR 3 176 -231 2 1040 2800 58 19 8 chrX 59694002 59694370 -106955926 + L1Md_F2 LINE L1 5219 5590 -293 2 1040 7841 59 1 12 chrX 59694380 59694826 -106955470 + L1Md_F2 LINE L1 5587 6032 -550 2 1040 2319 58 2 235 chrX 59694826 59695302 -106954994 - RLTR10B2 LTR ERVK 0 365 1 2 1040 7841 59 1 12 chrX 59695302 59695862 -106954434 + L1Md_F2 LINE L1 6033 6582 0 2 1040 1631 83 0 0 chrX 59695862 59696079 -106954217 + MTB_Mm LTR MaLR 186 402 -5 2 1040 251 204 0 0 chrX 59696683 59696727 -106953569 + tRNA-Arg-CGY_ tRNA tRNA 3 46 -30 2 1040 25 0 0 0 chrX 59696777 59696802 -106953494 + AT_rich Low_complexity Low_complexity 1 25 0 2 1040 191 146 24 0 chrX 59696842 59696883 -106953413 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2 1040 581 169 13 45 chrX 59697596 59697793 -106952503 + Lx2 LINE L1 6656 6925 -72 2 1040 200 93 0 65 chrX 59698178 59698224 -106952072 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 1040 1721 333 78 44 chrX 59700079 59701188 -106949108 + Lx8 LINE L1 6057 7202 -271 2 1040 3970 37 2 12 chrX 59701229 59701723 -106948573 + L1Md_F2 LINE L1 6091 6579 -3 2 1040 294 29 0 0 chrX 59701766 59701801 -106948495 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1040 414 0 0 0 chrX 59701801 59701846 -106948450 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 1040 461 365 95 27 chrX 59702045 59702383 -106947913 + L2 LINE L2 2108 2468 -951 2 1040 323 327 35 35 chrX 59702672 59702846 -106947450 + RMER15 LTR ERVL 348 521 -54 2 1040 33 73 0 0 chrX 59704166 59704234 -106946062 + AT_rich Low_complexity Low_complexity 1 68 0 2 1040 26 30 0 0 chrX 59704988 59705021 -106945275 + AT_rich Low_complexity Low_complexity 1 33 0 2 1040 441 327 26 20 chrX 59705080 59705233 -106945063 - Lx8 LINE L1 -173 7300 7147 2 1040 371 308 12 6 chrX 59705383 59705543 -106944753 + L1MA7 LINE L1 5831 5991 -300 2 1040 1079 255 46 20 chrX 59705692 59705996 -106944300 - Lx6 LINE L1 -5 7455 7144 2 1040 304 255 10 0 chrX 59706073 59706171 -106944125 + L1MA7 LINE L1 6189 6287 -4 2 1040 189 0 0 0 chrX 59706637 59706658 -106943638 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1040 348 161 0 0 chrX 59706882 59706944 -106943352 + CT-rich Low_complexity Low_complexity 1 62 0 2 1040 4272 131 19 7 chrX 59706944 59707635 -106942661 - Lx3A LINE L1 -1 6980 6282 2 1040 4902 87 29 3 chrX 59707635 59708330 -106941966 + L1_Mur1 LINE L1 4902 5614 -272 2 1040 22 0 0 0 chrX 59708438 59708460 -106941836 + AT_rich Low_complexity Low_complexity 1 22 0 2 1040 1131 316 44 3 chrX 59708974 59709317 -106940979 - MTE2b LTR MaLR -20 359 3 2 1040 2621 304 25 31 chrX 59709319 59710118 -106940178 - MTE2b-int LTR MaLR 0 1580 787 2 1040 4515 112 4 35 chrX 59711988 59712702 -106937594 - Lx3_Mus LINE L1 0 7009 6318 2 1040 3034 96 50 112 chrX 59712702 59712775 -106937521 + Lx3_Mus LINE L1 5727 5799 -1210 2 1040 1083 106 6 12 chrX 59712775 59712947 -106937349 + L1Md_F2 LINE L1 6400 6570 -12 2 1040 3034 96 50 112 chrX 59712947 59713126 -106937170 + Lx3_Mus LINE L1 5800 5922 -1087 2 1040 369 0 0 0 chrX 59713126 59713167 -106937129 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1040 3034 96 50 112 chrX 59713167 59713287 -106937009 + Lx3_Mus LINE L1 5923 6033 -976 2 1040 231 36 0 0 chrX 59713287 59713315 -106936981 + (GGGA)n Simple_repeat Simple_repeat 1 28 0 3 1040 3034 96 50 112 chrX 59713315 59713540 -106936756 + Lx3_Mus LINE L1 6034 6288 -721 2 1040 388 347 92 39 chrX 59714019 59714172 -106936124 + RSINE1 SINE B4 3 163 -2 3 1040 25 0 0 0 chrX 59714532 59714557 -106935739 + AT_rich Low_complexity Low_complexity 1 25 0 3 1040 1198 55 0 0 chrX 59714782 59714927 -106935369 + B1_Mus2 SINE Alu 3 147 0 3 1040 200 0 100 0 chrX 59714927 59714967 -106935329 + (CAA)n Simple_repeat Simple_repeat 2 45 0 3 1040 8457 30 0 0 chrX 59715386 59716379 -106933917 + L1Md_T LINE L1 5590 6582 0 3 1040 1312 149 0 139 chrX 59716492 59716780 -106933516 - ORR1A4 LTR MaLR -81 248 1 3 1040 1034 218 85 4 chrX 59716781 59717016 -106933280 - Lx5 LINE L1 -660 6390 6137 3 1040 14311 16 1 0 chrX 59717007 59718652 -106931644 - L1Md_F2 LINE L1 -175 5708 4063 3 1040 7146 43 3 2 chrX 59718652 59719539 -106930757 + L1Md_F2 LINE L1 5694 6581 -1 3 1040 783 217 21 3 chrX 59719557 59719765 -106930531 - Lx5 LINE L1 -900 6158 5941 3 1040 925 143 34 10 chrX 59719767 59719972 -106930324 - L1_Mur2 LINE L1 -3799 2078 1869 3 1040 331 299 33 33 chrX 59720154 59720275 -106930021 - MLT1D LTR MaLR -344 161 41 3 1040 691 271 15 19 chrX 59722688 59722951 -106927345 - L1_Mur3 LINE L1 -6648 1064 803 3 1040 231 208 0 36 chrX 59722952 59723007 -106927289 - MTC LTR MaLR -354 67 15 3 1040 550 404 5 0 chrX 59723135 59723343 -106926953 + ID_B1 SINE B4 14 222 -2 3 1040 200 290 205 49 chrX 59723787 59723972 -106926324 - MIRb SINE MIR 0 268 55 3 1040 281 268 116 16 chrX 59724297 59724497 -106925799 - Lx7 LINE L1 -458 5842 5591 3 1040 483 90 0 0 chrX 59725004 59725082 -106925214 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 1040 378 0 0 0 chrX 59725082 59725123 -106925173 + (GA)n Simple_repeat Simple_repeat 2 43 0 3 1040 209 182 0 0 chrX 59726806 59726839 -106923457 + (CGTG)n Simple_repeat Simple_repeat 1 33 0 3 1040 674 358 65 14 chrX 59726851 59727129 -106923167 - B4 SINE B4 0 292 1 3 1040 21 0 0 0 chrX 59727319 59727340 -106922956 + AT_rich Low_complexity Low_complexity 1 21 0 3 1040 2490 129 19 19 chrX 59727934 59728346 -106921950 - Lx2 LINE L1 -19 6978 6567 3 1040 274 280 0 13 chrX 59728880 59728956 -106921340 + RMER15 LTR ERVL 1 75 -500 3 1040 1046 231 21 12 chrX 59729121 59729362 -106920934 + RMER15 LTR ERVL 247 489 -86 3 1040 232 114 0 0 chrX 59729368 59729403 -106920893 + RMER15 LTR ERVL 449 483 -92 3 1040 234 345 0 0 chrX 59729406 59729464 -106920832 - RSINE1 SINE B4 -99 66 9 3 1040 243 0 0 0 chrX 59729493 59729520 -106920776 + (TTA)n Simple_repeat Simple_repeat 1 27 0 3 1040 5474 125 6 1 chrX 59729524 59730331 -106919965 - Lx3B LINE L1 -4 6969 6159 3 1040 507 346 106 3 chrX 59730736 59731095 -106919201 - Lx8 LINE L1 -5 7468 7073 3 1040 244 362 111 53 chrX 59731216 59731423 -106918873 + MLT1I LTR MaLR 1 219 -192 3 1040 5620 192 46 23 chrX 59732937 59734213 -106916083 + Lx2B LINE L1 5695 7000 0 3 1040 1145 70 0 27 chrX 59734560 59734708 -106915588 + B1_Mus1 SINE Alu 5 148 0 3 1040 418 304 31 31 chrX 59734783 59735007 -106915289 + L1M3e LINE L1 2 225 -6805 3 1040 1287 292 39 18 chrX 59735033 59735473 -106914823 - Lx8 LINE L1 -627 6846 6398 3 1040 426 335 109 6 chrX 59735472 59735637 -106914659 + Lx8 LINE L1 7041 7222 -251 3 1040 36 0 0 0 chrX 59735799 59735835 -106914461 + AT_rich Low_complexity Low_complexity 1 36 0 3 1040 319 329 54 36 chrX 59736133 59736357 -106913939 + L1M2 LINE L1 5016 5243 -900 3 1040 1054 97 0 40 chrX 59737959 59738110 -106912186 - B1_Mus1 SINE Alu -2 146 2 3 1040 194 316 81 10 chrX 59738426 59738525 -106911771 - MIR SINE MIR -34 228 123 3 1040 353 432 46 44 chrX 59738757 59739168 -106911128 + LTR88a LTR Gypsy 254 665 -151 3 1040 21 0 0 0 chrX 59739372 59739393 -106910903 + AT_rich Low_complexity Low_complexity 1 21 0 3 1040 528 304 0 60 chrX 59739778 59739911 -106910385 - B3A SINE B2 -72 126 2 3 1040 1167 321 45 39 chrX 59739939 59740477 -106909819 - Lx5 LINE L1 -15 7035 6495 3 1040 28 86 0 0 chrX 59740898 59740968 -106909328 + AT_rich Low_complexity Low_complexity 1 70 0 3 1040 2201 205 12 12 chrX 59741252 59741676 -106908620 - Lx5 LINE L1 0 7050 6627 3 1040 291 28 0 0 chrX 59741694 59741730 -106908566 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1040 669 327 18 4 chrX 59741794 59742067 -106908229 + Lx7 LINE L1 6740 7016 -680 3 1040 33 43 0 0 chrX 59742210 59742257 -106908039 + AT_rich Low_complexity Low_complexity 1 47 0 3 1040 585 0 0 0 chrX 59743641 59743706 -106906590 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 1040 495 0 0 0 chrX 59743706 59743760 -106906536 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1040 2247 200 101 18 chrX 59744238 59744794 -106905502 - Lx2 LINE L1 -16 6981 6380 3 1040 2811 154 10 2 chrX 59744793 59745282 -106905014 - L1_Mur1 LINE L1 -105 5781 5289 3 1040 7997 145 111 8 chrX 59745289 59747982 -106902314 - Lx3A LINE L1 0 6981 3805 3 1040 1620 83 0 0 chrX 59747992 59748232 -106902064 + L1_Mur1 LINE L1 2922 3161 -2725 3 1040 31 0 0 0 chrX 59748397 59748428 -106901868 + AT_rich Low_complexity Low_complexity 1 31 0 3 1040 3432 39 7 0 chrX 59749276 59749692 -106900604 - L1Md_T LINE L1 -2 6580 6162 3 1040 1097 295 51 5 chrX 59749717 59750149 -106900147 + L1_Mur3 LINE L1 5337 5788 -92 3 1040 1067 110 7 0 chrX 59750149 59750294 -106900002 + B1_Mus2 SINE Alu 1 146 -1 3 1040 180 170 0 0 chrX 59750294 59750347 -106899949 + (CAAA)n Simple_repeat Simple_repeat 1 53 0 3 1040 269 326 20 10 chrX 59750581 59750680 -106899616 - B3 SINE B2 -90 126 27 3 1040 1198 48 7 0 chrX 59750835 59750980 -106899316 - B1_Mus1 SINE Alu -2 146 1 3 1040 572 111 10 0 chrX 59751865 59751964 -106898332 + (TA)n Simple_repeat Simple_repeat 1 100 0 3 1040 25 0 0 0 chrX 59752035 59752060 -106898236 + AT_rich Low_complexity Low_complexity 1 25 0 3 1040 980 295 12 76 chrX 59752161 59752491 -106897805 - MTEa LTR MaLR -67 312 4 3 1040 371 341 72 40 chrX 59752491 59752777 -106897519 + L1M5 LINE L1 2779 3082 -3064 3 1040 1277 40 0 0 chrX 59752777 59752925 -106897371 + B1_Mus1 SINE Alu 1 148 0 3 1040 371 341 72 40 chrX 59752925 59752986 -106897310 + L1M5 LINE L1 3083 3137 -3009 3 1040 24 32 0 0 chrX 59753136 59753167 -106897129 + AT_rich Low_complexity Low_complexity 1 31 0 3 1040 994 210 47 0 chrX 59753882 59754096 -106896200 + Lx7 LINE L1 6979 7202 -494 3 1040 255 272 0 80 chrX 59754111 59754223 -106896073 + Lx6 LINE L1 5875 5980 -1070 3 1040 272 203 28 28 chrX 59755461 59755532 -106894764 + RNERVK23-int LTR ERVK 5106 5176 -3041 3 1040 342 281 14 14 chrX 59755627 59755775 -106894521 + MERVK26-int LTR ERVK 4721 4868 -2051 3 1040 832 193 39 6 chrX 59755912 59756094 -106894202 - RMER19B LTR ERVK 0 902 715 3 1040 866 143 6 0 chrX 59756730 59756905 -106893391 + (GA)n Simple_repeat Simple_repeat 1 176 0 3 1040 662 331 10 10 chrX 59756905 59757198 -106893098 + MERVK26-int LTR ERVK 6311 6603 -316 3 1040 1488 303 96 11 chrX 59757909 59759078 -106891218 + Lx6 LINE L1 5943 7434 -26 3 1040 474 221 105 77 chrX 59759084 59759265 -106891031 + Lx7 LINE L1 7206 7391 -305 3 1040 184 304 0 0 chrX 59760593 59760639 -106889657 - L3 LINE CR1 -792 3697 3652 3 1040 454 385 43 27 chrX 59761076 59761263 -106889033 - MLT1A1 LTR MaLR -81 327 138 3 1040 1505 193 152 14 chrX 59761266 59761629 -106888667 + MTC LTR MaLR 1 413 -8 3 1040 342 336 0 9 chrX 59761633 59761738 -106888558 - MLT1A1 LTR MaLR -227 138 35 3 1040 2982 201 58 20 chrX 59761792 59761947 -106888349 - Lx5 LINE L1 -13 7037 6857 3 1040 450 0 0 0 chrX 59761947 59761997 -106888299 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 1040 2982 201 58 20 chrX 59761997 59762492 -106887804 - Lx5 LINE L1 -194 6856 6362 3 1040 1874 186 33 37 chrX 59762506 59762965 -106887331 + Lx5 LINE L1 5914 6370 -680 3 1040 383 308 6 55 chrX 59763808 59763990 -106886306 + CT-rich Low_complexity Low_complexity 2 174 0 3 1040 726 319 25 40 chrX 59764285 59764690 -106885606 + Lx8 LINE L1 6918 7316 -157 3 1040 654 269 31 57 chrX 59766529 59766817 -106883479 + L1_Rod LINE L1 5364 5624 -223 3 1040 840 274 10 0 chrX 59766873 59767077 -106883219 - B3 SINE B2 -10 206 1 3 1040 464 188 0 8 chrX 59767153 59767282 -106883014 + (TA)n Simple_repeat Simple_repeat 1 128 0 3 1040 24 0 0 0 chrX 59767442 59767466 -106882830 + AT_rich Low_complexity Low_complexity 1 24 0 3 1040 227 130 19 0 chrX 59767947 59768001 -106882295 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 3 1041 278 50 0 24 chrX 59768893 59768934 -106881362 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 3 1041 423 0 0 0 chrX 59770360 59770407 -106879889 + (A)n Simple_repeat Simple_repeat 1 47 0 3 1041 324 103 0 0 chrX 59770651 59770709 -106879587 + (A)n Simple_repeat Simple_repeat 1 58 0 3 1041 309 26 0 0 chrX 59771387 59771425 -106878871 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1041 360 0 0 0 chrX 59772935 59772975 -106877321 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1041 239 281 0 0 chrX 59773696 59773785 -106876511 + A-rich Low_complexity Low_complexity 1 89 0 3 1041 267 54 0 0 chrX 59776571 59776608 -106873688 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 3 1041 186 43 0 0 chrX 59778177 59778200 -106872096 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1041 396 0 0 0 chrX 59778969 59779013 -106871283 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1041 279 54 0 0 chrX 59779795 59779832 -106870464 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 3 1041 432 0 0 0 chrX 59784260 59784308 -106865988 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1041 257 198 22 55 chrX 59785027 59785118 -106865178 + A-rich Low_complexity Low_complexity 4 91 0 3 1041 246 125 0 0 chrX 59787148 59787196 -106863100 + (T)n Simple_repeat Simple_repeat 1 48 0 3 1041 186 43 0 0 chrX 59788764 59788787 -106861509 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1041 408 67 0 0 chrX 59789560 59789620 -106860676 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 1041 210 91 0 0 chrX 59790404 59790437 -106859859 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 3 1041 186 43 0 0 chrX 59794071 59794094 -106856202 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1041 324 0 0 0 chrX 59794867 59794903 -106855393 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1041 200 31 62 0 chrX 59799329 59799361 -106850935 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 4 1041 561 64 0 0 chrX 59800124 59800202 -106850094 + (CA)n Simple_repeat Simple_repeat 1 78 0 4 1041 282 73 0 0 chrX 59800986 59801027 -106849269 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 4 1041 396 0 0 0 chrX 59809222 59809266 -106841030 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1041 182 108 0 51 chrX 59810521 59810560 -106839736 + A-rich Low_complexity Low_complexity 2 38 0 4 1041 3169 279 90 18 chrX 59810818 59812455 -106837841 - Lx7 LINE L1 -811 6885 5115 4 1041 356 205 12 0 chrX 59812459 59812542 -106837754 - ORR1D1 LTR MaLR -2 372 289 4 1041 1132 193 70 12 chrX 59812510 59812767 -106837529 + RLTR15 LTR ERVK 81 352 -7 4 1041 2217 126 6 0 chrX 59812778 59813103 -106837193 - ORR1A2 LTR MaLR 0 327 1 4 1041 264 77 0 0 chrX 59813172 59813211 -106837085 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1041 270 73 0 0 chrX 59813386 59813427 -106836869 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 4 1041 21 36 0 0 chrX 59813787 59813815 -106836481 + AT_rich Low_complexity Low_complexity 1 28 0 4 1041 1052 195 23 0 chrX 59813823 59814038 -106836258 + RLTR15 LTR ERVK 1 220 -139 4 1041 7022 76 11 2 chrX 59814038 59814950 -106835346 + L1_Mus2 LINE L1 5637 6556 -10 4 1041 729 153 49 0 chrX 59814950 59815094 -106835202 + RLTR15 LTR ERVK 201 351 -8 4 1041 321 239 99 26 chrX 59816029 59816162 -106834134 - L1MD3 LINE L1 -168 6011 5889 4 1041 1096 96 0 0 chrX 59816861 59817007 -106833289 + B1_Mus2 SINE Alu 2 147 0 4 1041 360 263 20 0 chrX 59817033 59817132 -106833164 + MLT1C LTR MaLR 341 441 -26 4 1041 929 301 87 35 chrX 59818571 59819078 -106831218 - MT2A LTR ERVL 0 533 1 4 1041 644 265 88 6 chrX 59820754 59820936 -106829360 - B3 SINE B2 -19 197 1 4 1041 3177 43 8 0 chrX 59821375 59821769 -106828527 + L1Md_F2 LINE L1 6186 6582 0 4 1041 8196 47 6 0 chrX 59822391 59823547 -106826749 - L1Md_F2 LINE L1 0 6582 5421 4 1041 269 189 85 43 chrX 59823547 59823641 -106826655 + RMER10B LTR ERVL 299 396 -2 4 1041 1329 226 78 17 chrX 59823905 59824251 -106826045 + ORR1D2 LTR MaLR 1 367 -3 4 1041 189 74 0 0 chrX 59824995 59825022 -106825274 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 1041 303 333 8 16 chrX 59825180 59825302 -106824994 + CT-rich Low_complexity Low_complexity 6 126 0 4 1041 566 336 25 30 chrX 59825342 59825578 -106824718 - Lx8 LINE L1 -576 6897 6663 4 1041 1002 226 88 45 chrX 59825578 59825930 -106824366 + RMER13A LTR ERVK 106 472 -388 4 1041 1657 139 14 81 chrX 59826352 59826697 -106823599 - RLTRETN_Mm LTR ERVK 0 322 1 4 1041 2172 147 0 77 chrX 59826881 59827115 -106823181 - RMER10B LTR ERVL 0 398 194 4 1041 1095 97 6 11 chrX 59827115 59827293 -106823003 + (GAA)n Simple_repeat Simple_repeat 3 179 0 4 1041 2172 147 0 77 chrX 59827293 59827487 -106822809 - RMER10B LTR ERVL -205 193 3 4 1041 442 291 121 16 chrX 59827492 59827674 -106822622 - Lx8 LINE L1 -1068 6405 6205 4 1041 206 139 0 44 chrX 59827676 59827721 -106822575 + (CATA)n Simple_repeat Simple_repeat 1 43 0 4 1041 345 383 54 17 chrX 59827760 59827872 -106822424 + Tigger7 DNA MER2_type 10 117 -2374 4 1041 255 79 0 0 chrX 59827872 59827910 -106822386 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1041 345 383 54 17 chrX 59827910 59828036 -106822260 + Tigger7 DNA MER2_type 118 256 -2235 4 1041 396 281 120 16 chrX 59828098 59828340 -106821956 + Tigger7 DNA MER2_type 2143 2409 -82 4 1041 1194 125 16 5 chrX 59828426 59828611 -106821685 - B2_Mm2 SINE B2 -4 191 5 4 1041 311 403 65 0 chrX 59828646 59828862 -106821434 - Tigger5 DNA MER2_type -2176 230 1 4 1041 627 311 66 21 chrX 59829866 59830229 -106820067 - L1MA4A LINE L1 -396 5907 5566 4 1041 216 0 0 0 chrX 59830559 59830583 -106819713 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1041 299 333 0 0 chrX 59830953 59831037 -106819259 - B3A SINE B2 -114 84 1 4 1041 219 119 0 0 chrX 59831049 59831073 -106819223 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1041 351 0 0 0 chrX 59831073 59831112 -106819184 + (TC)n Simple_repeat Simple_repeat 2 40 0 4 1041 219 119 0 0 chrX 59831112 59831129 -106819167 + (TG)n Simple_repeat Simple_repeat 2 18 0 4 1041 920 281 19 35 chrX 59831238 59831496 -106818800 + MTD LTR MaLR 37 290 -129 4 1041 1736 182 72 16 chrX 59831939 59832312 -106817984 - ORR1B1 LTR MaLR 0 394 1 4 1041 21 36 0 0 chrX 59833649 59833677 -106816619 + AT_rich Low_complexity Low_complexity 1 28 0 4 1041 1147 268 61 21 chrX 59833770 59834169 -106816127 + MTD LTR MaLR 1 405 -14 4 1041 1438 296 104 52 chrX 59834172 59835216 -106815080 + MTD-int LTR MaLR 1 1231 -27 4 1041 366 61 0 0 chrX 59835243 59835292 -106815004 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1041 244 321 0 47 chrX 59835361 59835446 -106814850 + MTD LTR MaLR 1 81 -315 4 1041 9446 54 0 1 chrX 59835446 59836727 -106813569 + L1Md_F2 LINE L1 4690 5969 -613 4 1041 2132 78 7 0 chrX 59838239 59838523 -106811773 - L1_Mus1 LINE L1 0 6567 6282 4 1041 618 336 61 16 chrX 59838621 59838996 -106811300 + L1MEc LINE L1 323 714 -5686 4 1041 908 200 88 13 chrX 59839035 59839263 -106811033 - RMER1C Other Other 0 1342 1098 4 1041 737 216 122 21 chrX 59839270 59839459 -106810837 - RMER12 LTR ERVK -1114 208 1 4 1041 415 185 32 11 chrX 59839462 59839555 -106810741 + RMER1C Other Other 1247 1341 -1 4 1041 604 281 132 3 chrX 59839972 59840343 -106809953 + L1MEc LINE L1 750 1168 -5232 4 1041 340 263 126 28 chrX 59840532 59840747 -106809549 + L1MEc LINE L1 1295 1530 -4870 4 1041 1112 75 7 0 chrX 59841088 59841234 -106809062 - B1_Mm SINE Alu 0 147 1 4 1041 22 35 0 0 chrX 59841444 59841473 -106808823 + AT_rich Low_complexity Low_complexity 1 29 0 4 1041 1424 160 11 15 chrX 59841511 59841777 -106808519 + Lx3B LINE L1 6704 6968 -5 4 1041 10009 160 23 2 chrX 59841857 59843656 -106806640 - Lx6 LINE L1 -1779 5694 3855 4 1041 5914 158 14 0 chrX 59843652 59844622 -106805674 + Lx LINE L1 5663 6646 -8 4 1041 245 244 11 143 chrX 59844622 59844713 -106805583 + RMER4A LTR ERVK 309 387 -79 4 1041 713 70 10 0 chrX 59844713 59844813 -106805483 + (TCCC)n Simple_repeat Simple_repeat 4 104 0 4 1041 396 0 0 0 chrX 59844812 59844856 -106805440 + (TTTC)n Simple_repeat Simple_repeat 4 47 0 4 1041 958 92 145 18 chrX 59844856 59845022 -106805274 - B2_Mm2 SINE B2 0 195 9 4 1041 746 284 25 35 chrX 59845026 59845227 -106805069 + B3 SINE B2 17 215 -1 4 1041 1367 236 115 12 chrX 59845342 59845511 -106804785 + ORR1C2 LTR MaLR 1 174 -210 4 1041 780 97 0 0 chrX 59845511 59845635 -106804661 + (TC)n Simple_repeat Simple_repeat 1 124 0 4 1041 1367 236 115 12 chrX 59845635 59845803 -106804493 + ORR1C2 LTR MaLR 175 372 -12 4 1041 310 287 138 13 chrX 59845877 59846029 -106804267 + L1MC LINE L1 3607 3777 -2369 4 1041 1192 229 63 61 chrX 59846438 59846879 -106803417 - RMER10A LTR ERVL 0 442 1 4 1041 445 339 40 69 chrX 59846906 59847283 -106803013 + L1MC LINE L1 4625 4990 -1156 4 1041 21 57 0 0 chrX 59847372 59847407 -106802889 + AT_rich Low_complexity Low_complexity 1 35 0 4 1041 21 89 0 0 chrX 59847501 59847557 -106802739 + AT_rich Low_complexity Low_complexity 1 56 0 4 1041 997 290 49 3 chrX 59847849 59848157 -106802139 + Lx6 LINE L1 7091 7412 -48 4 1041 281 273 106 38 chrX 59848429 59848710 -106801586 + L1ME2z LINE L1 5767 6051 -128 4 1041 719 339 68 19 chrX 59849068 59849390 -106800906 + MTD LTR MaLR 82 419 0 4 1041 449 163 11 0 chrX 59849856 59849948 -106800348 + (TA)n Simple_repeat Simple_repeat 2 94 0 4 1041 382 23 0 0 chrX 59849948 59849992 -106800304 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1041 772 200 11 34 chrX 59850581 59850714 -106799582 + URR1A DNA MER1_type 55 185 -41 4 1041 1028 246 192 45 chrX 59850714 59851208 -106799088 - RMER2 LTR ERV1 0 567 1 4 1041 772 200 11 34 chrX 59851208 59851250 -106799046 + URR1A DNA MER1_type 186 226 0 4 1041 669 210 34 20 chrX 59851747 59851893 -106798403 - B1_Mur4 SINE Alu -1 149 2 4 1041 364 368 58 35 chrX 59852364 59852623 -106797673 + MLT1D LTR MaLR 46 310 -195 4 1041 5672 39 3 0 chrX 59853333 59854021 -106796275 - L1Md_T LINE L1 -1 6581 5892 4 1041 713 307 44 50 chrX 59854549 59854892 -106795404 + MT2A LTR ERVL 193 533 0 4 1041 256 301 42 71 chrX 59854893 59855061 -106795235 - L1MB1 LINE L1 -135 6054 5892 4 1041 546 366 30 59 chrX 59857007 59857347 -106792949 + Lx8 LINE L1 6999 7340 -133 4 1041 204 40 0 0 chrX 59857347 59857372 -106792924 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 1041 546 366 30 59 chrX 59857372 59857504 -106792792 + Lx8 LINE L1 7341 7457 -16 4 1041 236 216 20 0 chrX 59857674 59857725 -106792571 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 4 1041 383 0 21 0 chrX 59858126 59858173 -106792123 + (TC)n Simple_repeat Simple_repeat 1 48 0 4 1041 50 18 0 0 chrX 59858906 59858963 -106791333 + AT_rich Low_complexity Low_complexity 1 57 0 4 1041 789 68 0 0 chrX 59858971 59859074 -106791222 - B2_Mm2 SINE B2 -91 104 2 4 1041 23 33 0 0 chrX 59859144 59859174 -106791122 + AT_rich Low_complexity Low_complexity 1 30 0 4 1041 1295 86 21 16 chrX 59859197 59859386 -106790910 - B2_Mm2 SINE B2 -4 191 2 4 1041 360 94 0 0 chrX 59859442 59859495 -106790801 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 1041 582 296 69 5 chrX 59859908 59860112 -106790184 - ID_B1 SINE B4 -5 219 3 4 1041 1338 237 18 57 chrX 59860253 59860642 -106789654 + ORR1D1 LTR MaLR 1 374 0 4 1041 346 308 122 104 chrX 59861274 59861516 -106788780 + MTE2a LTR MaLR 20 241 -138 4 1041 276 30 0 0 chrX 59861516 59861549 -106788747 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 4 1041 1014 89 0 7 chrX 59861549 59861685 -106788611 - B1_Mm SINE Alu -12 135 1 4 1041 346 290 154 124 chrX 59861685 59861708 -106788588 + MTE2a LTR MaLR 242 263 -116 4 1041 476 375 53 8 chrX 59861708 59861974 -106788322 + Lx8 LINE L1 6924 7201 -272 4 1041 6987 75 4 10 chrX 59861993 59862923 -106787373 - L1_Mus2 LINE L1 0 6566 5642 4 1041 929 300 203 23 chrX 59862923 59863366 -106786930 + MTE2a-int LTR MaLR 1058 1580 0 4 1041 724 313 66 134 chrX 59863370 59863750 -106786546 + MTE2a LTR MaLR 5 358 -21 4 1041 216 0 0 0 chrX 59863751 59863775 -106786521 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4 1041 312 27 0 0 chrX 59864764 59864801 -106785495 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 1041 2908 79 8 10 chrX 59864847 59865244 -106785052 + MTA_Mm LTR MaLR 1 396 0 5 1041 7720 80 27 3 chrX 59865244 59866316 -106783980 + MTA_Mm-int LTR MaLR 1 1098 0 5 1041 2781 86 47 0 chrX 59866316 59866698 -106783598 + MTA_Mm LTR MaLR 1 400 0 5 1041 3758 56 0 0 chrX 59866758 59867223 -106783073 + L1_Mus1 LINE L1 6101 6565 -2 5 1041 1179 91 32 0 chrX 59867321 59867507 -106782789 - L1_Mus3 LINE L1 -5 6633 6442 5 1041 576 328 56 84 chrX 59869141 59869497 -106780799 - MLT1A LTR MaLR -3 371 26 5 1041 491 358 47 35 chrX 59869772 59870027 -106780269 - MLT1F2 LTR MaLR -7 553 296 5 1041 35398 36 0 0 chrX 59870204 59875452 -106774844 + L1Md_T LINE L1 245 5589 -297 5 1041 8977 6 0 0 chrX 59875452 59876448 -106773848 + L1Md_T LINE L1 5590 6585 0 5 1041 680 165 0 0 chrX 59876449 59876570 -106773726 - L1VL4 LINE L1 -5578 724 604 5 1041 393 22 0 0 chrX 59876570 59876616 -106773680 + (A)n Simple_repeat Simple_repeat 1 46 0 5 1041 378 328 45 39 chrX 59877240 59877551 -106772745 + L1M4 LINE L1 317 629 -5913 5 1041 249 83 0 0 chrX 59878048 59878084 -106772212 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 5 1041 992 106 14 0 chrX 59878091 59878232 -106772064 - B1_Mus2 SINE Alu 0 147 5 5 1041 561 245 14 34 chrX 59878244 59878392 -106771904 - B1_Mm SINE Alu 0 147 3 5 1041 820 371 81 38 chrX 59878517 59879024 -106771272 + MLT2B5 LTR ERVL 59 587 -14 5 1041 225 0 0 0 chrX 59879127 59879152 -106771144 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 1041 27844 39 1 1 chrX 59879210 59884280 -106766016 - L1Md_T LINE L1 -1151 4735 1 5 1041 7355 17 0 0 chrX 59884282 59885126 -106765170 + L1Md_T LINE L1 4746 5589 -297 5 1041 8990 5 0 0 chrX 59885126 59886152 -106764144 + L1Md_T LINE L1 5590 6585 0 5 1041 3529 135 57 2 chrX 59886348 59886910 -106763386 + MT2B LTR ERVL 1 593 -8 5 1041 2253 95 34 17 chrX 59887145 59887497 -106762799 + Lx LINE L1 6295 6652 -2 5 1041 1307 217 62 117 chrX 59887504 59887984 -106762312 + Lx7 LINE L1 7243 7696 0 5 1041 474 65 0 0 chrX 59889569 59889631 -106760665 + (CA)n Simple_repeat Simple_repeat 2 63 0 5 1041 207 69 0 0 chrX 59889659 59889688 -106760608 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 5 1041 542 276 53 105 chrX 59890060 59890250 -106760046 + RMER30 DNA MER1_type 7 186 -16 5 1041 414 0 0 0 chrX 59891441 59891487 -106758809 + (TC)n Simple_repeat Simple_repeat 2 47 0 5 1041 375 23 0 0 chrX 59892031 59892075 -106758221 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 5 1041 186 224 0 0 chrX 59892086 59892135 -106758161 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 1041 646 275 58 62 chrX 59892145 59892475 -106757821 - MT2B LTR ERVL -33 568 196 5 1041 417 20 0 0 chrX 59893021 59893071 -106757225 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1041 7051 187 41 16 chrX 59893549 59895279 -106755017 - Lx4B LINE L1 -13 7045 5269 5 1041 7416 67 1 4 chrX 59895331 59896295 -106754001 + L1Md_F2 LINE L1 5610 6570 -12 5 1041 432 171 0 0 chrX 59896432 59896514 -106753782 + (TA)n Simple_repeat Simple_repeat 2 83 0 5 1041 4187 117 11 4 chrX 59897057 59897948 -106752348 + L1_Mus2 LINE L1 5179 6080 -486 5 1041 238 325 62 27 chrX 59898117 59898373 -106751923 + MusHAL1 LINE L1 241 505 -2207 5 1041 1650 121 58 14 chrX 59898710 59899004 -106751292 + L1_Mm LINE L1 5179 5485 -398 5 1041 2925 65 13 0 chrX 59899512 59899895 -106750401 + RLTR10 LTR ERVK 1 388 -2 5 1042 222 314 71 0 chrX 59900560 59900630 -106749666 + B1F1 SINE Alu 17 91 -58 5 1042 191 36 0 35 chrX 59900633 59900662 -106749634 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1042 1749 125 62 37 chrX 59900668 59900992 -106749304 + RLTR9F LTR ERVK 1 332 -83 5 1042 21877 58 2 1 chrX 59900992 59904498 -106745798 - L1Md_F2 LINE L1 -3 6579 3070 5 1042 406 183 10 28 chrX 59904498 59904604 -106745692 + RLTR9F LTR ERVK 308 415 0 5 1042 586 253 71 81 chrX 59904606 59904916 -106745380 + ETnERV2-int LTR ERVK 3 309 -3005 5 1042 8811 157 61 27 chrX 59904911 59906442 -106743854 + ETnERV2-int LTR ERVK 723 3075 -4331 5 1042 252 0 0 0 chrX 59906442 59906470 -106743826 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 5 1042 1032 90 0 0 chrX 59906470 59906603 -106743693 - B1_Mm SINE Alu -13 134 2 5 1042 8811 176 37 30 chrX 59906603 59908856 -106741440 + ETnERV2-int LTR ERVK 1661 4081 -3325 5 1042 360 160 13 13 chrX 59909073 59909149 -106741147 + ETnERV2-int LTR ERVK 7331 7406 0 5 1042 829 170 56 21 chrX 59909149 59909343 -106740953 + RLTR9F LTR ERVK 1 190 -219 5 1042 1594 248 56 139 chrX 59909303 59909907 -106740389 + RLTR1D LTR ERV1 52 605 0 5 1042 1348 151 72 18 chrX 59909907 59910116 -106740180 + RLTR9F LTR ERVK 125 351 -64 5 1042 462 36 0 0 chrX 59910116 59910172 -106740124 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1042 1348 151 72 18 chrX 59910172 59910238 -106740058 + RLTR9F LTR ERVK 352 414 -1 5 1042 252 0 0 0 chrX 59910309 59910337 -106739959 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 5 1042 345 47 0 0 chrX 59910692 59910735 -106739561 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 5 1042 198 0 0 0 chrX 59911993 59912015 -106738281 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 5 1042 326 346 66 34 chrX 59912147 59912497 -106737799 + Lx7 LINE L1 469 829 -6899 5 1042 5307 197 79 78 chrX 59912853 59913258 -106737038 + Lx7 LINE L1 4240 4628 -1252 5 1042 480 48 0 0 chrX 59913258 59913321 -106736975 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 1042 5307 199 79 77 chrX 59913321 59914557 -106735739 + Lx7 LINE L1 4629 5880 -687 5 1042 754 216 24 12 chrX 59914571 59914740 -106735556 - URR1A DNA MER1_type 0 226 56 5 1042 1794 252 84 29 chrX 59914760 59915316 -106734980 + Lx7 LINE L1 5882 6468 -1228 5 1042 306 107 0 0 chrX 59915507 59915563 -106734733 + (A)n Simple_repeat Simple_repeat 1 56 0 5 1042 21 0 0 0 chrX 59915576 59915597 -106734699 + AT_rich Low_complexity Low_complexity 1 21 0 5 1042 3134 324 61 29 chrX 59916049 59916742 -106733554 - RMER15-int LTR ERVL -2798 2201 1492 5 1042 246 32 0 0 chrX 59916742 59916773 -106733523 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1042 3134 324 61 29 chrX 59916773 59917578 -106732718 - RMER15-int LTR ERVL -3508 1491 656 5 1042 6922 86 32 5 chrX 59917775 59918933 -106731363 - L1Md_F2 LINE L1 -2 6580 5393 5 1042 2607 94 3 0 chrX 59918933 59919307 -106730989 + L1Md_F2 LINE L1 5001 5375 -508 5 1042 523 347 30 39 chrX 59919394 59919680 -106730616 - RMER15-int LTR ERVL -4661 338 70 5 1042 394 18 36 0 chrX 59919929 59919984 -106730312 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1042 286 278 0 0 chrX 59920140 59920212 -106730084 + RMER15-int LTR ERVL 780 851 -4148 5 1042 246 368 58 35 chrX 59920490 59920662 -106729634 - Lx8 LINE L1 -250 7223 7048 5 1042 839 130 178 0 chrX 59921011 59921180 -106729116 + L1_Mur2 LINE L1 4401 4599 -1278 5 1042 280 320 74 79 chrX 59921336 59921526 -106728770 + RMER15 LTR ERVL 347 535 -40 5 1042 231 36 0 0 chrX 59921961 59921989 -106728307 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1042 498 128 0 0 chrX 59921989 59922083 -106728213 + (GA)n Simple_repeat Simple_repeat 1 94 0 5 1042 26 74 0 0 chrX 59922535 59922589 -106727707 + AT_rich Low_complexity Low_complexity 1 54 0 5 1042 1139 117 0 6 chrX 59923701 59923882 -106726414 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 1042 5548 95 5 1 chrX 59923895 59924678 -106725618 - L1Md_F2 LINE L1 -12 6570 5785 5 1042 921 147 0 7 chrX 59924693 59924837 -106725459 - B1_Mus2 SINE Alu 0 147 5 5 1042 635 238 14 7 chrX 59924851 59924995 -106725301 - B1_Mm SINE Alu 0 147 3 5 1042 886 383 43 24 chrX 59925120 59925540 -106724756 + MLT2B3 LTR ERVL 59 486 -68 5 1042 3587 128 57 2 chrX 59925897 59926459 -106723837 + MT2B LTR ERVL 1 593 -8 5 1042 2262 100 28 17 chrX 59926694 59927050 -106723246 + Lx LINE L1 6295 6654 0 5 1042 1176 215 64 129 chrX 59927062 59927543 -106722753 + Lx7 LINE L1 7247 7696 0 5 1042 333 68 0 0 chrX 59929128 59929172 -106721124 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1042 189 0 0 0 chrX 59929172 59929193 -106721103 + (CCA)n Simple_repeat Simple_repeat 3 23 0 5 1042 189 0 0 0 chrX 59929193 59929214 -106721082 + (CAA)n Simple_repeat Simple_repeat 1 21 0 5 1042 200 222 0 0 chrX 59929214 59929259 -106721037 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 5 1042 598 306 0 32 chrX 59929629 59929815 -106720481 + RMER30 DNA MER1_type 7 186 -16 5 1042 303 28 0 0 chrX 59931007 59931043 -106719253 + (TC)n Simple_repeat Simple_repeat 2 37 0 5 1042 501 17 0 0 chrX 59931593 59931651 -106718645 + (CTCA)n Simple_repeat Simple_repeat 1 58 0 5 1042 1176 22 0 0 chrX 59931652 59931791 -106718505 + (TCTA)n Simple_repeat Simple_repeat 2 140 0 5 1042 270 176 0 0 chrX 59931803 59931854 -106718442 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 5 1042 937 221 249 13 chrX 59931868 59932185 -106718111 - MT2A LTR ERVL -55 478 87 5 1042 7275 179 42 15 chrX 59933229 59934969 -106715327 - Lx4B LINE L1 0 7058 5269 5 1042 387 0 0 0 chrX 59934988 59935031 -106715265 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 1042 473 92 13 0 chrX 59935031 59935106 -106715190 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 1042 36 0 0 0 chrX 59935472 59935508 -106714788 + AT_rich Low_complexity Low_complexity 1 36 0 5 1042 405 0 0 0 chrX 59935509 59935554 -106714742 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 1042 6829 113 14 1 chrX 59936070 59937462 -106712834 + L1_Mus2 LINE L1 5156 6566 0 5 1042 2810 89 0 0 chrX 59937782 59938176 -106712120 + L1_Mus2 LINE L1 5687 6080 -486 5 1042 283 301 86 51 chrX 59938345 59938601 -106711695 + MusHAL1 LINE L1 241 505 -2207 5 1042 527 29 0 0 chrX 59939129 59939197 -106711099 - L1Md_T LINE L1 0 6582 6515 5 1042 222 314 71 0 chrX 59939936 59940006 -106710290 + B1F1 SINE Alu 17 91 -58 5 1042 191 36 0 35 chrX 59940009 59940038 -106710258 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1042 2150 130 54 42 chrX 59940044 59940454 -106709842 + RLTR9F LTR ERVK 1 415 0 5 1042 517 254 39 73 chrX 59940456 59940660 -106709636 + ETnERV-int LTR ERVK 3 199 -3115 5 1042 273 29 0 0 chrX 59940660 59940694 -106709602 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 5 1042 243 0 0 0 chrX 59941947 59941974 -106708322 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1042 3653 41 2 0 chrX 59942077 59942518 -106707778 - L1Md_T LINE L1 0 6582 6141 5 1042 240 330 45 41 chrX 59942707 59942928 -106707368 + Lx7 LINE L1 608 829 -6899 5 1042 5496 198 77 70 chrX 59943284 59944888 -106705408 + Lx7 LINE L1 4240 5854 -26 5 1042 715 228 24 12 chrX 59944925 59945094 -106705202 - URR1A DNA MER1_type 0 226 56 5 1042 1944 264 48 14 chrX 59945114 59945671 -106704625 + Lx7 LINE L1 5882 6457 -1239 5 1042 3397 354 62 29 chrX 59946336 59948429 -106701867 - RMER15-int LTR ERVL -2777 2222 70 5 1042 286 23 47 0 chrX 59948678 59948721 -106701575 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1042 281 278 0 0 chrX 59948879 59948951 -106701345 + RMER15-int LTR ERVL 780 851 -4148 5 1042 856 118 178 0 chrX 59949761 59949930 -106700366 + L1_Mur2 LINE L1 4401 4599 -1278 5 1042 261 330 67 72 chrX 59950083 59950276 -106700020 + RMER15 LTR ERVL 344 535 -40 5 1042 405 0 0 0 chrX 59950309 59950354 -106699942 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1042 36 40 0 0 chrX 59950574 59950624 -106699672 + AT_rich Low_complexity Low_complexity 1 50 0 6 1042 393 22 0 0 chrX 59950709 59950755 -106699541 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1042 426 88 0 0 chrX 59950755 59950823 -106699473 + (GA)n Simple_repeat Simple_repeat 1 68 0 6 1042 23 0 0 0 chrX 59951028 59951051 -106699245 + AT_rich Low_complexity Low_complexity 1 23 0 6 1042 390 141 41 27 chrX 59951382 59951455 -106698841 + ETnERV2-int LTR ERVK 7331 7404 -2 6 1042 2203 146 13 100 chrX 59951458 59951906 -106698390 + RLTR9F LTR ERVK 3 411 -4 6 1042 625 80 30 0 chrX 59952289 59952389 -106697907 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 6 1042 933 124 21 0 chrX 59952405 59952550 -106697746 - B1_Mus1 SINE Alu 0 148 1 6 1042 23316 84 2 7 chrX 59952636 59953370 -106696926 - L1_Mus1 LINE L1 -1 6566 5837 6 1042 6089 73 80 1 chrX 59953370 59954198 -106696098 + RLTR13B1 LTR ERVK 1 893 0 6 1042 23316 78 5 3 chrX 59954198 59957348 -106692948 - L1_Mus1 LINE L1 -47 5836 2675 6 1042 34243 81 4 6 chrX 59957389 59963357 -106686939 - L1Md_F2 LINE L1 -3 6579 633 6 1042 5153 121 10 5 chrX 59963360 59964182 -106686114 - L1_Mur1 LINE L1 -886 5000 4175 6 1042 457 351 26 7 chrX 59964338 59964490 -106685806 - RSINE1 SINE B4 0 165 11 6 1042 19322 36 18 8 chrX 59964805 59965928 -106684368 - L1Md_F3 LINE L1 -15 6569 5440 6 1042 3440 28 2 0 chrX 59965928 59966323 -106683973 - MTA_Mm LTR MaLR 0 396 1 6 1042 19322 58 2 4 chrX 59966323 59968357 -106681939 - L1Md_F3 LINE L1 -444 5439 3404 6 1042 306 0 0 0 chrX 59968442 59968476 -106681820 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1042 1171 264 3 13 chrX 59968493 59968792 -106681504 + L3b LINE CR1 3 298 -184 6 1042 23 78 0 0 chrX 59969614 59969665 -106680631 + AT_rich Low_complexity Low_complexity 1 51 0 6 1042 267 31 0 0 chrX 59969751 59969783 -106680513 + (TC)n Simple_repeat Simple_repeat 2 33 0 6 1042 369 0 0 0 chrX 59969785 59969826 -106680470 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1042 1624 227 36 8 chrX 59969979 59970343 -106679953 + ORR1D1 LTR MaLR 1 374 0 6 1042 267 415 62 49 chrX 59970998 59971368 -106678928 - LTR33A_ LTR ERVL -24 507 133 6 1042 497 198 34 119 chrX 59972235 59972455 -106677841 + L1VL1 LINE L1 56 395 -6027 6 1042 494 278 93 79 chrX 59972455 59972670 -106677626 + L1Md_F LINE L1 392 807 -5809 6 1042 24534 133 38 23 chrX 59972642 59977359 -106672937 + L1Md_F LINE L1 725 5514 -369 6 1042 3499 106 2 4 chrX 59977359 59977861 -106672435 + L1_Mus2 LINE L1 6065 6565 -1 6 1042 22 56 0 0 chrX 59977982 59978018 -106672278 + AT_rich Low_complexity Low_complexity 1 36 0 6 1042 235 366 14 0 chrX 59978342 59978413 -106671883 - RSINE1 SINE B4 -7 158 87 6 1042 243 0 0 0 chrX 59978610 59978637 -106671659 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1042 1603 290 111 19 chrX 59979055 59979685 -106670611 + Lx8 LINE L1 6665 7352 -121 6 1042 324 0 0 0 chrX 59979753 59979789 -106670507 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1042 393 209 46 37 chrX 59980047 59980156 -106670140 + Lx7 LINE L1 7587 7696 0 6 1042 335 273 85 85 chrX 59980543 59980724 -106669572 + L1MEg LINE L1 1904 2089 -4077 6 1042 1731 209 16 204 chrX 59980724 59981476 -106668820 - RMER19C LTR ERVK 0 611 1 6 1042 335 273 85 85 chrX 59981476 59981554 -106668742 + L1MEg LINE L1 2066 2163 -4003 6 1042 283 264 110 0 chrX 59981560 59981651 -106668645 + 7SK RNA RNA 172 272 -59 6 1042 230 240 79 47 chrX 59981799 59981926 -106668370 + L1MEg LINE L1 2317 2447 -3699 6 1042 35 0 0 0 chrX 59983057 59983092 -106667204 + AT_rich Low_complexity Low_complexity 1 35 0 6 1042 655 252 73 4 chrX 59983207 59983454 -106666842 - Lx9 LINE L1 -8 7636 7373 6 1042 30 27 0 0 chrX 59983454 59983491 -106666805 + AT_rich Low_complexity Low_complexity 1 37 0 6 1042 27 49 0 0 chrX 59983813 59983854 -106666442 + AT_rich Low_complexity Low_complexity 1 41 0 6 1042 1104 298 24 12 chrX 59983870 59984203 -106666093 + Lx8 LINE L1 6871 7207 -266 6 1042 304 238 63 0 chrX 59984237 59984300 -106665996 + Lx8 LINE L1 7162 7228 -245 6 1042 423 150 25 0 chrX 59984401 59984481 -106665815 + Lx4A LINE L1 5730 5811 -1247 6 1042 3815 220 83 6 chrX 59984480 59985299 -106664997 + Lx5 LINE L1 6169 7050 0 6 1042 4780 88 3 1 chrX 59985365 59986021 -106664275 - L1_Mus1 LINE L1 0 6567 5911 6 1042 561 297 7 0 chrX 59986113 59986251 -106664045 + B1_Mur2 SINE Alu 3 141 -8 6 1042 240 339 52 26 chrX 59986308 59986502 -106663794 - L1_Rod LINE L1 -4444 1403 1205 6 1042 701 96 278 0 chrX 59986626 59986741 -106663555 - B1_Mus1 SINE Alu 0 148 2 6 1042 24 0 0 0 chrX 59986781 59986805 -106663491 + AT_rich Low_complexity Low_complexity 1 24 0 6 1042 485 333 28 85 chrX 59986858 59987035 -106663261 - B3A SINE B2 -31 167 1 6 1042 333 317 96 45 chrX 59987124 59987322 -106662974 - B3 SINE B2 -5 211 4 6 1042 314 0 0 47 chrX 59987336 59987379 -106662917 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 6 1042 2726 194 50 34 chrX 59987729 59988289 -106662007 + RLTR25A LTR ERVK 1 569 -534 6 1042 5808 82 31 2 chrX 59988293 59989119 -106661177 + L1_Mm LINE L1 4595 5444 -439 6 1042 3838 65 2 2 chrX 59989119 59989609 -106660687 + L1Md_F2 LINE L1 6081 6570 -12 6 1042 939 113 38 6 chrX 59989611 59989771 -106660525 + RLTR25A LTR ERVK 563 727 -376 6 1042 250 91 0 35 chrX 59989772 59989829 -106660467 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 6 1042 1063 196 68 118 chrX 59989855 59990022 -106660274 + RLTR25A LTR ERVK 741 887 -216 6 1042 561 72 0 0 chrX 59990022 59990105 -106660191 + (CA)n Simple_repeat Simple_repeat 2 84 0 6 1042 1063 196 68 118 chrX 59990105 59990319 -106659977 + RLTR25A LTR ERVK 888 1103 0 6 1042 356 369 60 5 chrX 59990319 59990518 -106659778 + L1M5 LINE L1 5559 5768 -411 6 1042 456 19 0 0 chrX 59990715 59990768 -106659528 + (TC)n Simple_repeat Simple_repeat 1 53 0 6 1042 360 352 7 14 chrX 59991114 59991255 -106659041 - Lx9 LINE L1 -428 7216 7077 6 1042 7227 106 5 2 chrX 59991346 59992994 -106657302 - L1_Mus1 LINE L1 0 6567 4936 6 1042 424 363 5 36 chrX 59993105 59993325 -106656971 - Lx8 LINE L1 -182 7291 7079 6 1042 4054 83 2 0 chrX 59993364 59993908 -106656388 - L1Md_F2 LINE L1 -13 6569 6025 6 1042 2286 99 6 6 chrX 59995339 59995674 -106654622 - L1Md_F2 LINE L1 -1 6581 6247 6 1042 1560 79 9 0 chrX 59995674 59995888 -106654408 + L1Md_F2 LINE L1 6028 6243 -339 6 1042 312 39 0 143 chrX 59996469 59996679 -106653617 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 6 1042 23 33 0 0 chrX 59997641 59997671 -106652625 + AT_rich Low_complexity Low_complexity 1 30 0 6 1042 3005 186 77 3 chrX 59997799 59998434 -106651862 + L1_Mur2 LINE L1 4981 5662 -215 6 1042 384 119 0 0 chrX 59998495 59998554 -106651742 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1042 324 283 97 68 chrX 59998648 59998857 -106651439 + Lx9 LINE L1 7245 7483 -161 6 1042 351 0 0 0 chrX 59998857 59998896 -106651400 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1042 324 283 97 68 chrX 59998896 59999069 -106651227 + Lx9 LINE L1 7484 7637 -7 6 1042 735 256 145 36 chrX 59999142 59999446 -106650850 - RLTR9A LTR ERVK -31 337 1 6 1042 340 251 48 26 chrX 59999447 59999585 -106650711 - L1M1 LINE L1 -460 5780 5643 6 1042 241 365 84 45 chrX 59999667 60000000 -106650296 - Lx8 LINE L1 0 7473 7128 6 1042 392 333 0 0 chrX 60000000 60000120 -106650176 - Lx8 LINE L1 -346 7127 7008 1 1042 983 316 99 21 chrX 60000138 60000603 -106649693 - Lx8 LINE L1 -580 6893 6393 1 1042 35162 19 1 72 chrX 60000663 60005727 -106644569 + L1Md_A LINE L1 260 5283 -600 2 1042 1175 100 0 22 chrX 60005727 60005911 -106644385 + L1Md_A LINE L1 6403 6582 0 3 1042 35162 16 0 80 chrX 60005911 60006593 -106643703 + L1Md_A LINE L1 5284 5586 -297 2 1042 8740 17 0 0 chrX 60006593 60007589 -106642707 + L1Md_A LINE L1 5587 6582 0 2 1042 353 349 60 20 chrX 60007616 60007815 -106642481 - Lx8 LINE L1 -1091 6382 6176 1 1042 370 338 8 8 chrX 60008171 60008305 -106641991 + Lx8 LINE L1 6865 6998 -475 4 1042 1085 291 69 20 chrX 60008313 60008660 -106641636 + MTE2a LTR MaLR 1 364 -15 5 1042 30 27 0 0 chrX 60008747 60008784 -106641512 + AT_rich Low_complexity Low_complexity 1 37 0 6 1042 258 338 14 14 chrX 60008795 60008867 -106641429 - ID4 SINE ID -7 76 5 7 1042 300 338 33 46 chrX 60008868 60008928 -106641368 - ID_B1 SINE B4 -1 223 123 8 1042 310 246 46 0 chrX 60008928 60008993 -106641303 - 7SLRNA srpRNA srpRNA -227 87 20 9 1042 300 338 33 46 chrX 60008993 60009020 -106641276 - ID_B1 SINE B4 -1 122 74 8 1042 5999 75 3 1 chrX 60009502 60010366 -106639930 - L1Md_F2 LINE L1 -624 5958 5094 1 1042 4648 78 2 5 chrX 60010370 60010990 -106639306 + L1Md_F2 LINE L1 5965 6582 0 1 1042 228 304 38 0 chrX 60011497 60011576 -106638720 - MIRb SINE MIR -127 141 60 1 1042 1049 264 54 4 chrX 60012760 60013037 -106637259 - Lx6 LINE L1 -15 7445 7155 1 1042 342 0 0 0 chrX 60013053 60013091 -106637205 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1042 301 0 68 0 chrX 60013097 60013141 -106637155 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 1042 905 280 0 23 chrX 60013143 60013362 -106636934 - Lx6 LINE L1 -309 7151 6938 1 1042 23 0 0 0 chrX 60013374 60013397 -106636899 + AT_rich Low_complexity Low_complexity 1 23 0 1 1042 1354 146 43 39 chrX 60014004 60014261 -106636035 + RMER17B LTR ERVK 1 258 -700 1 1042 713 224 10 48 chrX 60014254 60014460 -106635836 + RMER17B LTR ERVK 761 958 0 1 1042 200 89 67 0 chrX 60015240 60015285 -106635011 + (CAA)n Simple_repeat Simple_repeat 1 48 0 1 1042 715 254 54 40 chrX 60015366 60015643 -106634653 - L1_Rod LINE L1 -901 4976 4674 1 1042 789 310 112 56 chrX 60015806 60016376 -106633920 - Lx9 LINE L1 -97 7547 6946 1 1042 704 310 46 56 chrX 60016388 60016778 -106633518 + Lx8 LINE L1 5280 5665 -182 2 1042 492 353 131 14 chrX 60016781 60017154 -106633142 + Lx8 LINE L1 6173 6583 -890 2 1042 504 0 0 0 chrX 60017154 60017210 -106633086 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1042 492 353 131 14 chrX 60017210 60017270 -106633026 + Lx8 LINE L1 6584 6657 -816 2 1042 748 319 158 58 chrX 60017268 60017902 -106632394 + Lx8 LINE L1 6769 7465 -8 2 1042 450 359 56 0 chrX 60018463 60018658 -106631638 + MLT1B LTR MaLR 168 373 -17 2 1042 188 373 101 25 chrX 60018933 60019131 -106631165 - MIRc SINE MIR -53 215 3 2 1042 414 0 0 0 chrX 60020019 60020065 -106630231 + (TC)n Simple_repeat Simple_repeat 2 47 0 2 1042 411 21 0 0 chrX 60020065 60020112 -106630184 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1042 3565 119 117 3 chrX 60020160 60020757 -106629539 + Lx LINE L1 5990 6654 0 2 1042 357 43 0 0 chrX 60020843 60020890 -106629406 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 2 1042 526 110 0 0 chrX 60021255 60021346 -106628950 + L1_Mus2 LINE L1 6476 6566 0 2 1042 6830 86 9 3 chrX 60021560 60022802 -106627494 - L1Md_F2 LINE L1 -2 6580 5331 2 1042 6493 74 3 9 chrX 60022803 60023703 -106626593 + L1_Mm LINE L1 3902 4796 -1087 3 1042 30 59 0 0 chrX 60024018 60024069 -106626227 + AT_rich Low_complexity Low_complexity 1 51 0 3 1042 29188 24 0 0 chrX 60024119 60028302 -106621994 - L1Md_T LINE L1 0 6582 2400 3 1042 28 0 0 0 chrX 60028624 60028652 -106621644 + AT_rich Low_complexity Low_complexity 1 28 0 3 1042 222 118 0 0 chrX 60030129 60030163 -106620133 + (T)n Simple_repeat Simple_repeat 1 34 0 3 1042 1286 119 14 5 chrX 60030179 60030390 -106619906 - L1_Mus3 LINE L1 -6 6632 6420 3 1042 2040 76 0 0 chrX 60030390 60030654 -106619642 + L1_Mus3 LINE L1 6157 6420 -218 3 1043 256 31 0 0 chrX 60031032 60031064 -106619232 - L1Md_F2 LINE L1 -511 6071 6040 3 1043 3816 45 0 43 chrX 60031064 60031557 -106618739 + L1Md_F2 LINE L1 6097 6568 -14 3 1043 267 31 0 0 chrX 60032187 60032219 -106618077 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 3 1043 6511 124 26 68 chrX 60032219 60033305 -106616991 - Lx3_Mus LINE L1 -23 6986 5928 3 1043 1209 73 0 0 chrX 60033305 60033483 -106616813 + (TTC)n Simple_repeat Simple_repeat 2 179 0 3 1043 6511 124 26 68 chrX 60033483 60033517 -106616779 - Lx3_Mus LINE L1 -1082 5927 5914 3 1043 1281 61 0 0 chrX 60033517 60033697 -106616599 + (TTC)n Simple_repeat Simple_repeat 1 180 0 4 1043 936 0 0 0 chrX 60033699 60033803 -106616493 + (TTCTCC)n Simple_repeat Simple_repeat 3 106 0 4 1043 6511 124 26 68 chrX 60033803 60033877 -106616419 - Lx3_Mus LINE L1 -1096 5913 5838 3 1043 885 202 15 80 chrX 60033879 60034143 -106616153 - L1_Mur1 LINE L1 -6735 247 1 4 1043 440 274 47 14 chrX 60034144 60034292 -106616004 - L1_Mur1 LINE L1 -6767 215 63 4 1043 231 111 0 0 chrX 60035578 60035614 -106614682 - B1_Mus2 SINE Alu -111 36 1 4 1043 255 202 0 0 chrX 60036451 60036530 -106613766 + (CA)n Simple_repeat Simple_repeat 1 79 0 4 1043 378 0 0 0 chrX 60036815 60036857 -106613439 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1043 403 87 29 0 chrX 60036857 60036926 -106613370 + (GA)n Simple_repeat Simple_repeat 1 71 0 4 1043 2021 154 63 14 chrX 60036952 60037314 -106612982 - ORR1B1 LTR MaLR -14 380 1 4 1043 5787 199 41 70 chrX 60037314 60038867 -106611429 - ORR1B1-int LTR MaLR 0 1509 1 4 1043 1493 199 154 9 chrX 60038867 60038933 -106611363 - ORR1B1 LTR MaLR 0 394 328 4 1043 897 41 8 0 chrX 60038933 60039056 -106611240 - L1Md_T LINE L1 -2 6580 6457 4 1043 1493 199 154 9 chrX 60039056 60039333 -106610963 - ORR1B1 LTR MaLR -67 327 1 4 1043 1089 200 24 110 chrX 60039620 60040129 -106610167 + RMER17C LTR ERVK 1 402 -8 5 1043 254 279 12 0 chrX 60040195 60040281 -106610015 - Lx8 LINE L1 -1606 5867 5781 5 1043 400 301 87 40 chrX 60040474 60040772 -106609524 - L1M2 LINE L1 -925 5218 4907 5 1043 2051 106 0 109 chrX 60040831 60041180 -106609116 - RLTR10E LTR ERVK 0 311 1 5 1043 54219 88 8 14 chrX 60041180 60048573 -106601723 - MMERVK10C-int LTR ERVK 0 7581 231 5 1043 258 250 0 16 chrX 60048573 60048634 -106601662 - RLTR27 LTR ERVK -28 281 222 5 1043 554 144 33 0 chrX 60048634 60048724 -106601572 - MMERVK10C-int LTR ERVK -7488 93 1 5 1043 2038 110 3 101 chrX 60048724 60049069 -106601227 - RLTR10E LTR ERVK 0 311 1 5 1043 244 245 166 0 chrX 60049081 60049232 -106601064 - Lx8 LINE L1 -1059 4821 4646 5 1043 526 294 82 27 chrX 60049257 60049404 -106600892 - B3A SINE B2 -16 182 28 5 1043 428 35 17 0 chrX 60049404 60049462 -106600834 + (TTA)n Simple_repeat Simple_repeat 2 60 0 5 1043 1733 263 24 9 chrX 60049462 60049773 -106600523 - Lx2B LINE L1 -25 6975 6666 5 1043 198 0 0 0 chrX 60049773 60049795 -106600501 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 5 1043 1733 263 24 9 chrX 60049795 60049909 -106600387 - Lx2B LINE L1 -335 6665 6545 5 1043 356 257 92 13 chrX 60049940 60050175 -106600121 - L1M3 LINE L1 -1444 4696 4428 5 1043 502 328 28 39 chrX 60050195 60050376 -106599920 + B3A SINE B2 12 190 -8 6 1043 375 106 0 0 chrX 60050674 60050740 -106599556 + (TC)n Simple_repeat Simple_repeat 2 67 0 6 1043 341 221 95 103 chrX 60050742 60050858 -106599438 - MLT1H1 LTR MaLR -30 525 411 6 1043 363 350 116 24 chrX 60050892 60051056 -106599240 - MLT1H1 LTR MaLR -231 324 146 6 1043 1260 92 5 26 chrX 60051154 60051185 -106599111 - B2_Mm2 SINE B2 -9 186 160 6 1043 234 0 0 0 chrX 60051185 60051211 -106599085 + (ATTG)n Simple_repeat Simple_repeat 1 26 0 6 1043 1260 92 5 26 chrX 60051211 60051369 -106598927 - B2_Mm2 SINE B2 -36 159 1 6 1043 24258 25 0 0 chrX 60051383 60054936 -106595360 - L1Md_T LINE L1 0 6582 3030 6 1043 24 32 0 0 chrX 60055489 60055520 -106594776 + AT_rich Low_complexity Low_complexity 1 31 0 6 1043 422 337 67 31 chrX 60055864 60056057 -106594239 + B3 SINE B2 14 213 -3 6 1043 868 238 35 0 chrX 60056075 60056277 -106594019 - Lx7 LINE L1 -619 7077 6869 6 1043 375 268 0 0 chrX 60056312 60056394 -106593902 - Lx7 LINE L1 -1020 6676 6595 6 1043 292 336 8 42 chrX 60056736 60056854 -106593442 - Lx7 LINE L1 -1067 6629 6516 6 1043 1283 221 89 3 chrX 60057937 60058228 -106592068 - Lx3C LINE L1 -291 5586 5271 6 1043 5295 169 29 6 chrX 60058232 60059189 -106591107 + Lx3C LINE L1 5605 6583 -393 6 1043 22 56 0 0 chrX 60059306 60059342 -106590954 + AT_rich Low_complexity Low_complexity 1 36 0 7 1043 283 319 50 0 chrX 60059345 60059464 -106590832 - Lx4B LINE L1 0 7058 6934 7 1043 204 204 54 36 chrX 60059553 60059609 -106590687 - L3b LINE CR1 -244 238 182 7 1043 660 229 81 14 chrX 60059796 60060017 -106590279 - Lx9 LINE L1 -37 7607 7372 7 1043 186 43 0 0 chrX 60060654 60060677 -106589619 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 7 1043 354 45 0 0 chrX 60062501 60062545 -106587751 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1043 21 36 0 0 chrX 60062545 60062573 -106587723 + AT_rich Low_complexity Low_complexity 1 28 0 7 1043 1003 216 44 77 chrX 60062689 60063051 -106587245 - Lx9 LINE L1 0 7644 7295 7 1043 303 28 0 0 chrX 60063189 60063225 -106587071 + (TA)n Simple_repeat Simple_repeat 2 37 0 7 1043 22 0 0 0 chrX 60063903 60063925 -106586371 + AT_rich Low_complexity Low_complexity 1 22 0 7 1043 960 309 106 7 chrX 60064427 60064831 -106585465 - Lx8 LINE L1 -235 7238 6795 8 1043 385 237 32 0 chrX 60064818 60064911 -106585385 - L1MA9 LINE L1 -383 5929 5834 8 1043 23 54 0 0 chrX 60065031 60065068 -106585228 + AT_rich Low_complexity Low_complexity 1 37 0 8 1043 504 246 16 16 chrX 60065098 60065226 -106585070 - B3A SINE B2 -70 128 1 8 1043 5417 92 5 16 chrX 60065899 60066665 -106583631 + L1_Mus3 LINE L1 5874 6631 -7 8 1043 22 0 0 0 chrX 60068633 60068655 -106581641 + AT_rich Low_complexity Low_complexity 1 22 0 8 1043 189 0 0 0 chrX 60068933 60068954 -106581342 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 8 1043 4627 64 1 49 chrX 60069126 60069372 -106580924 - L1_Mm LINE L1 -3973 1910 1678 8 1043 3255 36 0 0 chrX 60069372 60069763 -106580533 - L1Md_T LINE L1 0 6582 6192 8 1043 4627 64 1 49 chrX 60069763 60070210 -106580086 - L1_Mm LINE L1 -4206 1677 1250 8 1043 274 264 9 36 chrX 60070550 60070660 -106579636 + T-rich Low_complexity Low_complexity 4 110 0 8 1043 405 0 0 0 chrX 60070661 60070706 -106579590 + (TG)n Simple_repeat Simple_repeat 1 45 0 9 1043 1026 276 66 18 chrX 60071139 60071733 -106578563 + Lx7 LINE L1 5531 6157 -1539 9 1043 2156 317 40 34 chrX 60071749 60072712 -106577584 + Lx7 LINE L1 6340 7307 -389 9 1043 232 213 27 0 chrX 60072715 60072790 -106577506 + T-rich Low_complexity Low_complexity 2 78 0 9 1043 2189 119 3 0 chrX 60073190 60073501 -106576795 + L1_Mm LINE L1 5467 5778 -105 9 1043 5069 93 16 1 chrX 60073501 60074229 -106576067 + L1_Mus3 LINE L1 5900 6638 0 9 1043 957 261 56 36 chrX 60074280 60074632 -106575664 - MTC LTR MaLR -12 388 14 9 1043 274 276 59 89 chrX 60074635 60074770 -106575526 + B1F SINE Alu 19 149 0 9 1043 233 315 46 9 chrX 60075307 60075416 -106574880 + RMER15 LTR ERVL 446 558 -17 9 1043 640 379 45 12 chrX 60075435 60075766 -106574530 - MTEb LTR MaLR -37 342 1 9 1043 23 0 0 0 chrX 60075957 60075980 -106574316 + AT_rich Low_complexity Low_complexity 1 23 0 9 1043 361 230 38 61 chrX 60076113 60076245 -106574051 - Lx4B LINE L1 -46 7012 6905 1 1043 250 217 0 0 chrX 60076240 60076286 -106574010 + L1_Mur2 LINE L1 5142 5187 -690 1 1043 30 0 0 0 chrX 60076510 60076540 -106573756 + AT_rich Low_complexity Low_complexity 1 30 0 1 1043 3024 164 11 20 chrX 60076546 60077087 -106573209 - Lx3A LINE L1 -5 6976 6441 1 1043 567 243 107 0 chrX 60077180 60077423 -106572873 + L1MA9 LINE L1 6044 6312 0 1 1043 343 352 16 18 chrX 60077549 60077691 -106572605 - B1F1 SINE Alu -1 148 8 1 1043 32 81 0 0 chrX 60077922 60077996 -106572300 + AT_rich Low_complexity Low_complexity 1 74 0 1 1043 21 0 0 0 chrX 60078651 60078672 -106571624 + AT_rich Low_complexity Low_complexity 1 21 0 1 1043 261 169 0 0 chrX 60080798 60080857 -106569439 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 1043 24 0 0 0 chrX 60081019 60081043 -106569253 + AT_rich Low_complexity Low_complexity 1 24 0 1 1043 3642 82 27 14 chrX 60081062 60081580 -106568716 + L1Md_F2 LINE L1 6057 6581 -1 1 1043 333 181 91 4 chrX 60082278 60082376 -106567920 - L1MA9 LINE L1 -35 6277 6168 1 1043 994 162 0 0 chrX 60082923 60083083 -106567213 - B2_Mm2 SINE B2 -34 161 2 1 1043 341 292 22 0 chrX 60083132 60083221 -106567075 - Lx8 LINE L1 -279 7194 7104 1 1043 257 132 0 0 chrX 60084834 60084887 -106565409 - MT2A LTR ERVL -6 527 475 1 1043 252 0 0 0 chrX 60084924 60084952 -106565344 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 1 1043 1384 271 88 16 chrX 60085002 60085433 -106564863 - MT2A LTR ERVL -69 464 3 1 1043 216 0 0 0 chrX 60085471 60085495 -106564801 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1043 525 186 56 21 chrX 60085688 60085831 -106564465 + Lx9 LINE L1 7495 7642 -2 1 1043 24 32 0 0 chrX 60087770 60087801 -106562495 + AT_rich Low_complexity Low_complexity 1 31 0 1 1043 2831 87 0 3 chrX 60088963 60089354 -106560942 - L1_Mus2 LINE L1 0 6566 6177 1 1043 22 35 0 0 chrX 60090623 60090652 -106559644 + AT_rich Low_complexity Low_complexity 1 29 0 1 1043 1125 178 66 12 chrX 60091603 60091859 -106558437 - Lx5 LINE L1 -1082 5968 5699 1 1043 3698 167 1 43 chrX 60092203 60092873 -106557423 - RLTR26 LTR ERVK 0 642 1 1 1043 35292 36 1 0 chrX 60093809 60099414 -106550882 + L1Md_Gf LINE L1 1 5589 -297 1 1043 8915 8 0 0 chrX 60099414 60100410 -106549886 + L1Md_T LINE L1 5587 6582 0 1 1043 35292 43 1 1 chrX 60100410 60100424 -106549872 + L1Md_Gf LINE L1 5590 5604 -282 1 1043 21 36 0 0 chrX 60100837 60100865 -106549431 + AT_rich Low_complexity Low_complexity 1 28 0 1 1043 181 316 143 40 chrX 60101285 60101460 -106548836 - MIRb SINE MIR -17 251 59 1 1043 282 297 0 32 chrX 60101671 60101765 -106548531 - Lx8 LINE L1 -668 6805 6715 1 1043 611 13 13 0 chrX 60101765 60101841 -106548455 + (CTATT)n Simple_repeat Simple_repeat 5 81 0 1 1043 2821 51 3 11 chrX 60101899 60102258 -106548038 - L1Md_F3 LINE L1 -14 6570 6215 1 1043 387 0 0 0 chrX 60102432 60102475 -106547821 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1043 536 333 73 0 chrX 60102524 60102728 -106547568 + ORR1D2 LTR MaLR 6 224 -146 1 1043 416 51 17 0 chrX 60102880 60102939 -106547357 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 1043 472 289 57 72 chrX 60104197 60104221 -106546075 + Lx8 LINE L1 6208 6231 -1242 1 1043 4733 139 17 0 chrX 60104221 60104946 -106545350 + RMER19A LTR ERVK 1 737 0 1 1043 748 189 71 49 chrX 60104946 60105130 -106545166 + Lx9 LINE L1 6368 6555 -1089 1 1043 980 115 36 18 chrX 60105130 60105298 -106544998 - B2_Mm2 SINE B2 -7 188 18 1 1043 729 348 52 12 chrX 60105299 60105642 -106544654 + Lx9 LINE L1 6563 6919 -725 1 1043 5567 86 13 10 chrX 60105642 60106438 -106543858 - L1Md_F2 LINE L1 0 6582 5785 1 1043 757 66 0 69 chrX 60106475 60106605 -106543691 + L1_Mm LINE L1 4362 4482 -1401 1 1043 700 265 53 58 chrX 60106605 60106966 -106543330 - RLTR10D LTR ERVK 0 359 1 1 1043 9478 75 35 6 chrX 60106966 60107660 -106542636 + L1_Mm LINE L1 4477 5213 -670 1 1043 2703 67 3 3 chrX 60107660 60108005 -106542291 - IAPLTR4 LTR ERVK 0 345 1 1 1043 9478 75 35 6 chrX 60108005 60108608 -106541688 + L1_Mm LINE L1 5214 5811 -72 1 1043 1067 278 143 17 chrX 60108603 60109241 -106541055 + Lx9 LINE L1 6911 7628 -16 1 1043 30 27 0 0 chrX 60109241 60109278 -106541018 + AT_rich Low_complexity Low_complexity 1 37 0 1 1043 351 227 36 18 chrX 60109405 60109517 -106540779 - Lx9 LINE L1 0 7644 7531 1 1043 516 32 0 0 chrX 60109526 60109588 -106540708 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 1 1043 578 285 65 38 chrX 60109617 60109880 -106540416 - Lx9 LINE L1 -180 7464 7195 1 1043 1139 270 64 23 chrX 60109901 60110291 -106540005 + MTD LTR MaLR 12 417 -2 1 1043 1969 295 26 64 chrX 60110306 60110450 -106539846 - Lx9 LINE L1 -475 7169 7041 1 1043 1052 47 33 20 chrX 60110450 60110603 -106539693 - L1_Mus1 LINE L1 -1 6566 6412 1 1043 1969 295 26 64 chrX 60110603 60111257 -106539039 - Lx9 LINE L1 -604 7040 6401 1 1043 24 0 0 0 chrX 60111257 60111281 -106539015 + AT_rich Low_complexity Low_complexity 1 24 0 1 1043 345 47 0 0 chrX 60111334 60111377 -106538919 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1043 430 291 44 146 chrX 60111385 60111466 -106538830 - B3A SINE B2 -33 183 95 1 1043 2751 99 28 10 chrX 60111466 60111863 -106538433 + MTB_Mm LTR MaLR 4 407 0 1 1043 430 285 33 166 chrX 60111863 60111982 -106538314 - B3A SINE B2 -97 101 1 1 1043 22 0 0 0 chrX 60111982 60112004 -106538292 + AT_rich Low_complexity Low_complexity 1 22 0 1 1043 2988 198 3 20 chrX 60112024 60112626 -106537670 - Lx LINE L1 -2 6652 6061 1 1043 418 278 71 0 chrX 60112782 60112908 -106537388 - MLT1A0 LTR MaLR 0 365 231 1 1043 2280 219 17 19 chrX 60113505 60113979 -106536317 + Lx5 LINE L1 6511 6983 -67 1 1043 573 226 88 65 chrX 60114426 60114705 -106535591 - LTRIS4 LTR ERV1 0 519 232 1 1043 687 302 36 0 chrX 60114810 60115002 -106535294 + B3 SINE B2 18 216 0 1 1043 31 0 0 0 chrX 60115002 60115033 -106535263 + AT_rich Low_complexity Low_complexity 1 31 0 1 1043 349 140 0 50 chrX 60115173 60115233 -106535063 - HAL1-3A_ME LINE L1 -826 2032 1976 1 1043 270 0 0 0 chrX 60115247 60115277 -106535019 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 1043 255 387 84 0 chrX 60115277 60115432 -106534864 - B3A SINE B2 -20 178 11 1 1043 517 344 32 19 chrX 60115733 60115949 -106534347 - Lx8 LINE L1 -451 7022 6804 1 1043 887 324 19 19 chrX 60115961 60116273 -106534023 + Lx8 LINE L1 6459 6770 -703 1 1043 1897 210 161 4 chrX 60116737 60117191 -106533105 + Lx2B LINE L1 6475 6999 -1 1 1043 250 123 17 17 chrX 60117224 60117282 -106533014 + A-rich Low_complexity Low_complexity 3 60 0 1 1043 1567 272 33 19 chrX 60117687 60118107 -106532189 - Lx6 LINE L1 -11 7449 7024 1 1043 200 354 0 0 chrX 60118355 60118437 -106531859 + GA-rich Low_complexity Low_complexity 1 82 0 1 1043 40478 14 0 6 chrX 60118743 60124903 -106525393 - L1Md_A LINE L1 0 6582 465 1 1043 352 317 401 38 chrX 60125521 60125835 -106524461 - Lx8 LINE L1 -948 6525 6098 1 1043 230 364 13 85 chrX 60125971 60126124 -106524172 + Lx8 LINE L1 6568 6709 -764 1 1043 439 276 86 8 chrX 60126138 60126266 -106524030 + RSINE1 SINE B4 8 145 -20 1 1043 393 75 0 0 chrX 60126269 60126322 -106523974 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1043 315 130 0 0 chrX 60126322 60126376 -106523920 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 1 1043 546 339 187 30 chrX 60126379 60126872 -106523424 + Lx8 LINE L1 6713 7282 -191 1 1043 212 211 28 0 chrX 60127525 60127596 -106522700 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 1043 34 55 0 0 chrX 60128595 60128650 -106521646 + AT_rich Low_complexity Low_complexity 1 55 0 1 1043 687 290 57 70 chrX 60128862 60129092 -106521204 + MTE2a LTR MaLR 15 241 -138 1 1043 457 314 120 5 chrX 60129195 60129387 -106520909 - B3 SINE B2 -1 215 2 1 1043 183 42 0 0 chrX 60129478 60129502 -106520794 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1043 23 0 0 0 chrX 60130168 60130191 -106520105 + AT_rich Low_complexity Low_complexity 1 23 0 1 1043 24 0 0 0 chrX 60130211 60130235 -106520061 + AT_rich Low_complexity Low_complexity 1 24 0 1 1043 1047 51 0 0 chrX 60130335 60130473 -106519823 + (TA)n Simple_repeat Simple_repeat 2 139 0 1 1043 319 329 117 12 chrX 60131121 60131284 -106519012 + MLT1G1 LTR MaLR 157 336 -243 1 1043 285 294 21 35 chrX 60131430 60131571 -106518725 - Lx8 LINE L1 -9 7464 7326 1 1043 2977 132 6 6 chrX 60131574 60132071 -106518225 - L1_Mm LINE L1 -1268 4615 4119 1 1043 3655 99 40 14 chrX 60132073 60132628 -106517668 + L1_Mus3 LINE L1 6063 6631 -7 1 1043 646 325 49 16 chrX 60132677 60132924 -106517372 - Lx8 LINE L1 -212 7261 7007 1 1043 321 89 0 0 chrX 60132987 60133032 -106517264 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1 1043 425 398 10 0 chrX 60133032 60133090 -106517206 - ID_B1 SINE B4 -5 219 161 1 1043 1019 109 0 26 chrX 60133090 60133241 -106517055 - B1_Mm SINE Alu 0 147 1 1 1043 425 398 10 0 chrX 60133241 60133388 -106516908 - ID_B1 SINE B4 -64 160 13 1 1043 1640 346 84 35 chrX 60133418 60133545 -106516751 - Lx9 LINE L1 -2 7471 7336 1 1043 261 0 0 0 chrX 60133545 60133574 -106516722 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1043 804 57 0 0 chrX 60133574 60133679 -106516617 + (TA)n Simple_repeat Simple_repeat 2 107 0 1 1043 1906 343 60 23 chrX 60133679 60134226 -106516070 - Lx9 LINE L1 -203 7441 6740 1 1043 897 189 103 10 chrX 60134226 60134429 -106515867 - URR1A DNA MER1_type 0 226 5 1 1043 1906 343 59 23 chrX 60134429 60134910 -106515386 - Lx9 LINE L1 -767 6877 6401 1 1043 1792 197 39 11 chrX 60134946 60135301 -106514995 + ORR1B2 LTR MaLR 3 367 0 1 1043 691 129 0 0 chrX 60135308 60135409 -106514887 - ORR1A3 LTR MaLR 0 326 226 1 1043 5431 39 0 1 chrX 60135409 60136058 -106514238 + L1Md_T LINE L1 5935 6582 0 1 1043 41137 7 0 1 chrX 60137972 60144759 -106505537 - L1Md_A LINE L1 0 6582 1 1 1043 2044 124 3 0 chrX 60145616 60145914 -106504382 + L1_Mm LINE L1 5495 5793 -90 1 1043 284 246 0 0 chrX 60145915 60145972 -106504324 + L1VL1 LINE L1 190 246 -6176 1 1043 5630 103 14 19 chrX 60145961 60147360 -106502936 + L1Md_F LINE L1 617 1966 -3917 1 1043 324 64 0 0 chrX 60147360 60147407 -106502889 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 1 1043 5630 84 22 2 chrX 60147407 60147475 -106502821 + L1Md_F LINE L1 1967 2050 -3833 1 1043 37685 17 0 7 chrX 60147476 60152652 -106497644 + L1Md_A LINE L1 452 5586 -297 1 1043 8536 25 1 0 chrX 60152652 60153647 -106496649 + L1Md_A LINE L1 5587 6582 0 1 1043 14419 82 11 1 chrX 60153670 60155678 -106494618 + L1_Mm LINE L1 2034 4061 -1822 2 1043 6994 67 1 0 chrX 60155676 60156575 -106493721 + L1_Mm LINE L1 4737 5636 -247 2 1043 240 273 33 22 chrX 60156575 60156665 -106493631 + RMER15 LTR ERVL 48 138 -437 2 1043 393 281 158 23 chrX 60156691 60156862 -106493434 + RMER15 LTR ERVL 275 468 -107 2 1043 434 34 34 0 chrX 60156862 60156921 -106493375 + (TAAA)n Simple_repeat Simple_repeat 2 62 0 2 1043 522 161 0 0 chrX 60156922 60157009 -106493287 + L1_Mus3 LINE L1 5791 5877 -761 2 1043 1475 53 5 5 chrX 60157009 60157199 -106493097 + B2_Mm2 SINE B2 1 190 -5 2 130 35250 63 8 4 chrX 60157206 60162752 -106487544 + L1Md_T LINE L1 98 5586 -297 2 1044 8299 41 0 0 chrX 60162752 60163748 -106486548 + L1Md_T LINE L1 5587 6582 0 2 1044 5312 93 10 4 chrX 60163742 60164508 -106485788 + L1_Mus3 LINE L1 5862 6632 -6 2 1044 7687 14 0 0 chrX 60164722 60165629 -106484667 - L1Md_T LINE L1 0 6582 5714 2 1044 8434 18 0 0 chrX 60165621 60166592 -106483704 + L1Md_T LINE L1 4757 5727 -156 2 1044 24 0 0 0 chrX 60166722 60166746 -106483550 + AT_rich Low_complexity Low_complexity 1 24 0 2 1044 29 78 0 0 chrX 60167130 60167194 -106483102 + AT_rich Low_complexity Low_complexity 1 64 0 2 1044 242 294 125 34 chrX 60167217 60167305 -106482991 - MTE2a LTR MaLR -110 269 174 2 1044 315 336 25 8 chrX 60167308 60167428 -106482868 + MTE2b LTR MaLR 246 367 -12 2 1044 6223 170 3 19 chrX 60168049 60169211 -106481085 - L1_Mur2 LINE L1 -296 5581 4438 2 1044 22 35 0 0 chrX 60170639 60170668 -106479628 + AT_rich Low_complexity Low_complexity 1 29 0 2 1044 477 0 0 0 chrX 60170817 60170870 -106479426 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1044 192 386 0 0 chrX 60172275 60172345 -106477951 - L2b LINE L2 0 3375 3306 2 1044 2753 61 0 0 chrX 60172558 60172902 -106477394 + L1Md_F2 LINE L1 5899 6242 -340 2 1044 2945 134 25 70 chrX 60173121 60173748 -106476548 + RMER17D2 LTR ERVK 1 599 -210 2 1044 1855 218 121 15 chrX 60173639 60174110 -106476186 - RLTR25B LTR ERVK -507 521 1 2 1044 266 98 0 0 chrX 60174112 60174153 -106476143 - ORR1A4 LTR MaLR -288 41 1 2 1044 426 53 0 0 chrX 60174162 60174219 -106476077 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1044 324 0 0 0 chrX 60174219 60174254 -106476042 + (TA)n Simple_repeat Simple_repeat 1 36 0 2 1044 233 353 0 0 chrX 60174326 60174394 -106475902 + Lx9 LINE L1 6607 6674 -970 2 1044 323 386 28 5 chrX 60174527 60174738 -106475558 + Lx8 LINE L1 6552 6767 -706 2 1044 351 113 0 0 chrX 60174976 60175029 -106475267 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1044 4476 99 14 9 chrX 60175154 60175806 -106474490 - L1Md_F2 LINE L1 -4 6578 5924 2 1044 2607 69 0 67 chrX 60175806 60176177 -106474119 - ORR1A1 LTR MaLR 0 346 1 2 1044 12771 75 25 0 chrX 60176177 60177925 -106472371 - ORR1A1-int LTR MaLR 0 1792 1 2 1044 850 70 0 43 chrX 60177925 60178076 -106472220 - ORR1A1 LTR MaLR 0 346 126 2 1044 2899 70 0 0 chrX 60178077 60178434 -106471862 + IAPEY2_LTR LTR ERVK 1 357 0 2 1044 30952 106 16 5 chrX 60178434 60183833 -106466463 - L1_Mus1 LINE L1 -717 5850 353 2 1044 38256 12 0 2 chrX 60184443 60190807 -106459489 + L1Md_A LINE L1 1 5586 -297 2 1044 9011 3 0 0 chrX 60190807 60191803 -106458493 + L1Md_A LINE L1 5587 6582 0 2 1044 457 317 175 57 chrX 60192204 60192415 -106457881 + MTE2b LTR MaLR 3 238 -141 2 1044 1622 74 33 0 chrX 60192441 60192656 -106457640 - L1_Mus1 LINE L1 -1 6566 6345 2 1044 2297 110 0 0 chrX 60192660 60192988 -106457308 + L1_Mm LINE L1 4736 5063 -820 2 1044 505 305 35 0 chrX 60192989 60193130 -106457166 + MTE2b LTR MaLR 233 378 -1 2 1044 1084 90 18 0 chrX 60193253 60193419 -106456877 + (TTTC)n Simple_repeat Simple_repeat 3 171 0 2 1044 2797 150 7 70 chrX 60193419 60194021 -106456275 - MusHAL1 LINE L1 -1050 1662 1099 2 1044 6509 150 24 1 chrX 60194020 60195219 -106455077 + Lx LINE L1 5427 6647 -7 2 1044 441 0 0 0 chrX 60196032 60196081 -106454215 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1044 863 78 0 0 chrX 60198058 60198187 -106452109 - L1Md_T LINE L1 0 6582 6454 2 1044 437 266 187 0 chrX 60198837 60199051 -106451245 - L1MC1 LINE L1 0 6333 6080 2 1044 356 280 60 0 chrX 60199101 60199269 -106451027 - L1MC1 LINE L1 -358 5975 5798 2 1044 306 314 29 0 chrX 60199250 60199390 -106450906 - L1MC1 LINE L1 -836 5497 5354 2 1044 29131 24 0 0 chrX 60199502 60202947 -106447349 + L1Md_T LINE L1 2142 5586 -297 2 1044 8979 6 0 0 chrX 60202947 60203943 -106446353 + L1Md_T LINE L1 5587 6582 0 2 1044 15884 18 1 0 chrX 60204100 60205940 -106444356 + L1Md_T LINE L1 3746 5586 -297 2 1044 8005 56 0 0 chrX 60205940 60206936 -106443360 + L1Md_T LINE L1 5587 6582 0 2 1044 402 94 0 0 chrX 60207765 60207829 -106442467 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 1044 546 99 0 0 chrX 60208343 60208434 -106441862 + (TA)n Simple_repeat Simple_repeat 2 92 0 2 1044 1183 0 28 0 chrX 60208434 60208578 -106441718 - L1Md_F2 LINE L1 -28 6554 6407 2 1044 491 12 128 23 chrX 60209806 60209892 -106440404 - L1Md_F3 LINE L1 -17 6567 6473 2 1044 371 312 0 0 chrX 60209997 60210090 -106440206 - B3 SINE B2 -104 112 20 2 1044 23 0 0 0 chrX 60210698 60210721 -106439575 + AT_rich Low_complexity Low_complexity 1 23 0 2 1044 267 291 0 0 chrX 60211171 60211250 -106439046 + Lx9 LINE L1 6884 6962 -682 2 1044 22 0 0 0 chrX 60211419 60211441 -106438855 + AT_rich Low_complexity Low_complexity 1 22 0 2 1044 603 324 86 52 chrX 60211500 60211965 -106438331 - Lx9 LINE L1 -41 7603 7123 2 1044 24 32 0 0 chrX 60212005 60212036 -106438260 + AT_rich Low_complexity Low_complexity 1 31 0 2 1044 348 24 0 0 chrX 60212637 60212678 -106437618 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1044 27 0 0 0 chrX 60212902 60212929 -106437367 + AT_rich Low_complexity Low_complexity 1 27 0 2 1044 218 370 130 0 chrX 60213284 60213392 -106436904 + MIRb SINE MIR 64 185 -83 2 1044 351 0 0 0 chrX 60213762 60213801 -106436495 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1044 5527 107 6 28 chrX 60216502 60217350 -106432946 + Lx3A LINE L1 6151 6979 -2 2 1044 1123 187 38 5 chrX 60217975 60218185 -106432111 + URR1B DNA MER1_type 1 217 -8 2 1044 24 0 0 0 chrX 60219010 60219034 -106431262 + AT_rich Low_complexity Low_complexity 1 24 0 2 1044 5646 60 3 0 chrX 60219034 60219747 -106430549 - L1_Mus1 LINE L1 -2 6565 5851 2 1044 243 0 0 0 chrX 60220512 60220539 -106429757 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 1044 912 203 145 13 chrX 60221525 60221829 -106428467 - Lx9 LINE L1 -1 7643 7300 2 1044 464 243 52 45 chrX 60221827 60221982 -106428314 + Lx9 LINE L1 6780 6935 -709 2 1044 2805 63 19 0 chrX 60221992 60222359 -106427937 - L1Md_F3 LINE L1 -624 5960 5587 2 1044 570 29 0 0 chrX 60222369 60222438 -106427858 - MTB LTR MaLR -1 399 331 2 1044 446 191 74 11 chrX 60222431 60222526 -106427770 - B1_Mus2 SINE Alu -17 130 30 2 1044 415 125 0 15 chrX 60222530 60222595 -106427701 + B1_Mus2 SINE Alu 70 133 -14 2 1044 592 29 0 0 chrX 60222585 60222655 -106427641 + MTA_Mm LTR MaLR 331 400 0 2 1044 3040 59 10 0 chrX 60222655 60223059 -106427237 + MTA_Mm-int LTR MaLR 1 408 -690 2 1044 35451 50 1 18 chrX 60223071 60228240 -106422056 + L1Md_A LINE L1 506 5586 -297 2 1044 8278 40 0 0 chrX 60228240 60229270 -106421026 + L1Md_A LINE L1 5587 6582 0 2 1044 5691 49 0 0 chrX 60229281 60230001 -106420295 + MTA_Mm-int LTR MaLR 377 1096 -2 2 1044 3367 43 0 0 chrX 60230003 60230399 -106419897 + MTA_Mm LTR MaLR 1 396 0 2 1044 7009 77 1 6 chrX 60230399 60231321 -106418975 - L1_Mm LINE L1 -301 5582 4661 2 1044 4814 69 5 9 chrX 60231321 60231975 -106418321 + L1Md_F2 LINE L1 5931 6581 -1 2 1044 7009 77 1 6 chrX 60231975 60231995 -106418301 - L1_Mm LINE L1 -1223 4660 4645 2 1044 234 233 67 0 chrX 60231979 60232039 -106418257 + Lx8 LINE L1 6741 6804 -669 2 1044 573 307 27 43 chrX 60232278 60232462 -106417834 - ID_B1 SINE B4 -38 186 6 2 1044 449 328 198 0 chrX 60232501 60232678 -106417618 - B3 SINE B2 -3 213 2 2 1044 1404 152 4 33 chrX 60232729 60232973 -106417323 - Lx4A LINE L1 -17 7041 6805 2 1044 1235 182 21 0 chrX 60232973 60233209 -106417087 + Lx9 LINE L1 6921 7161 -483 2 1044 3795 175 14 15 chrX 60233199 60233917 -106416379 + Lx3C LINE L1 6051 6767 -209 2 1044 661 241 90 5 chrX 60234087 60234287 -106416009 + Lx3C LINE L1 6758 6974 -2 2 1044 447 175 8 134 chrX 60234403 60234522 -106415774 + Lx9 LINE L1 7187 7290 -354 2 1044 337 262 12 12 chrX 60234944 60235029 -106415267 + MLT1C LTR MaLR 1 85 -382 2 1044 759 130 0 0 chrX 60235080 60235203 -106415093 + (TA)n Simple_repeat Simple_repeat 1 123 0 2 1044 368 62 0 0 chrX 60235203 60235251 -106415045 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1044 336 24 0 0 chrX 60235251 60235292 -106415004 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1044 559 351 83 9 chrX 60235325 60235555 -106414741 - B4A SINE B4 -20 272 26 2 1044 245 368 19 9 chrX 60235697 60235804 -106414492 + MLT1C LTR MaLR 283 390 0 2 1044 289 385 52 81 chrX 60235971 60236392 -106413904 + LTR16A1 LTR ERVL 15 423 -33 2 1044 219 150 0 0 chrX 60237397 60237437 -106412859 + (T)n Simple_repeat Simple_repeat 1 40 0 2 1044 33 25 0 0 chrX 60238056 60238096 -106412200 + AT_rich Low_complexity Low_complexity 1 40 0 2 1044 24 0 0 0 chrX 60238229 60238253 -106412043 + AT_rich Low_complexity Low_complexity 1 24 0 2 1044 270 0 0 0 chrX 60239739 60239769 -106410527 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1044 234 0 0 0 chrX 60239785 60239811 -106410485 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1044 338 373 75 34 chrX 60239811 60239958 -106410338 - RSINE1 SINE B4 -1 164 12 2 1044 487 0 32 0 chrX 60239975 60240038 -106410258 + (TC)n Simple_repeat Simple_repeat 2 66 0 2 1044 2141 206 16 59 chrX 60240139 60240717 -106409579 - RLTR31_Mur LTR ERVK 0 553 1 2 1044 601 308 80 13 chrX 60240830 60241067 -106409229 - Lx8 LINE L1 -865 6608 6356 2 1044 1278 341 52 23 chrX 60241366 60241976 -106408320 - Lx8 LINE L1 -225 7248 6621 2 1044 1163 123 17 0 chrX 60241991 60242170 -106408126 + B2_Mm1t SINE B2 3 184 -9 2 1044 27 0 0 0 chrX 60242281 60242308 -106407988 + AT_rich Low_complexity Low_complexity 1 27 0 2 1044 32294 76 4 4 chrX 60242313 60247507 -106402789 + L1Md_F2 LINE L1 299 5588 -298 2 1044 7929 53 4 0 chrX 60247508 60248500 -106401796 + L1Md_F2 LINE L1 5590 6585 0 2 1044 549 317 135 50 chrX 60249042 60249301 -106400995 + B4A SINE B4 11 291 -1 2 1044 465 62 0 0 chrX 60249341 60249406 -106400890 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 1044 730 314 25 78 chrX 60249444 60249844 -106400452 + MTE2a LTR MaLR 1 379 0 2 1044 315 192 218 7 chrX 60250494 60250656 -106399640 + L1_Mur2 LINE L1 492 677 -5625 2 1044 232 297 56 35 chrX 60250657 60250800 -106399496 + MER53 DNA hAT 17 162 -31 2 1044 7173 140 14 3 chrX 60250829 60252531 -106397765 - Lx LINE L1 -3 6651 4930 3 1044 302 61 20 0 chrX 60252531 60252580 -106397716 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1044 811 83 0 0 chrX 60252583 60252692 -106397604 - L1Md_F2 LINE L1 -800 5782 5674 3 1044 1487 198 32 0 chrX 60252692 60252970 -106397326 - RLTR12A LTR ERVK -278 290 4 3 1044 180 0 0 0 chrX 60253412 60253432 -106396864 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1044 29 0 0 0 chrX 60253945 60253974 -106396322 + AT_rich Low_complexity Low_complexity 1 29 0 3 1044 5962 78 0 1 chrX 60254800 60255571 -106394725 + L1_Mus1 LINE L1 5798 6567 0 3 1044 597 262 49 22 chrX 60256235 60256418 -106393878 - Lx4B LINE L1 -5 7053 6866 3 1044 885 171 195 0 chrX 60256467 60256672 -106393624 - Lx2A LINE L1 -40 6968 6724 3 1044 2967 193 39 28 chrX 60256734 60257719 -106392577 - L1_Mur1 LINE L1 -3978 1899 890 3 1044 315 0 0 0 chrX 60258046 60258081 -106392215 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 3 1044 673 179 0 32 chrX 60258081 60258237 -106392059 - Lx3A LINE L1 -10 6971 6821 3 1044 2923 132 50 6 chrX 60258248 60258745 -106391551 - Lx3_Mus LINE L1 -542 6467 5949 3 1044 792 317 11 8 chrX 60258996 60259260 -106391036 - Lx6 LINE L1 -9 7451 7187 3 1044 217 267 54 54 chrX 60259684 60259795 -106390501 + MIR SINE MIR 63 173 -89 3 1044 484 342 14 0 chrX 60261848 60262067 -106388229 + L1_Mur3 LINE L1 892 1113 -6615 3 1044 540 136 0 11 chrX 60262060 60262149 -106388147 + Lx3C LINE L1 5788 5875 -1101 3 1044 1243 175 0 0 chrX 60262152 60262358 -106387938 + Lx3C LINE L1 6509 6714 -262 3 1044 1761 200 31 7 chrX 60262347 60262799 -106387497 + L1_Mur3 LINE L1 2865 3327 -2553 3 1044 1953 165 78 3 chrX 60262799 60263158 -106387138 + ORR1B1 LTR MaLR 1 386 -8 3 1044 8208 226 24 11 chrX 60263182 60265330 -106384966 + L1_Mur3 LINE L1 3342 5505 -372 3 1044 9082 82 2 2 chrX 60265329 60266574 -106383722 + L1_Mm LINE L1 4337 5584 -299 3 1044 7357 73 1 6 chrX 60266574 60267560 -106382736 + L1Md_F2 LINE L1 5587 6567 -15 3 1044 6731 175 5 62 chrX 60267560 60267752 -106382544 + L1_Mm LINE L1 5568 5692 -185 3 1044 2652 79 15 0 chrX 60267762 60268323 -106381973 + L1VL4 LINE L1 577 1150 -2409 3 1044 2900 200 28 8 chrX 60268317 60268483 -106381813 + L1_Mm LINE L1 4459 4630 -1253 3 1044 240 59 0 0 chrX 60268483 60268517 -106381779 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 3 1044 2900 200 28 8 chrX 60268517 60268969 -106381327 + L1_Mm LINE L1 4631 5089 -794 3 1044 6211 102 38 7 chrX 60268965 60270314 -106379982 - L1Md_F LINE L1 -4209 1674 276 3 1044 262 206 29 0 chrX 60270293 60270361 -106379935 + L1_Mur2 LINE L1 5071 5140 -737 3 1044 198 176 0 0 chrX 60270791 60270842 -106379454 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1044 187 145 31 31 chrX 60270839 60270903 -106379393 + (CAGAGA)n Simple_repeat Simple_repeat 6 69 0 3 1044 879 251 90 36 chrX 60272117 60272473 -106377823 - L1_Rod LINE L1 -2916 2931 2557 3 1044 198 0 0 0 chrX 60272868 60272890 -106377406 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 1044 198 0 0 0 chrX 60272962 60272984 -106377312 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1044 347 314 94 27 chrX 60274013 60274648 -106375648 - L1M2 LINE L1 -2167 3976 3299 3 1044 5418 70 3 8 chrX 60275064 60275783 -106374513 + L1Md_F2 LINE L1 5855 6569 -13 3 1044 243 260 31 10 chrX 60275785 60275882 -106374414 + L1M4 LINE L1 3749 3847 -2299 3 1044 458 411 0 0 chrX 60275887 60276045 -106374251 + RSINE1 SINE B4 2 159 -6 3 1044 1307 40 0 17 chrX 60276266 60276442 -106373854 - L1Md_F3 LINE L1 -14 6570 6398 3 1044 1818 60 13 0 chrX 60276442 60276674 -106373622 + L1Md_F3 LINE L1 6140 6374 -210 3 1044 249 216 0 0 chrX 60277010 60277061 -106373235 + B3 SINE B2 1 51 -165 3 1044 180 245 0 0 chrX 60277178 60277231 -106373065 + (TATG)n Simple_repeat Simple_repeat 2 54 0 3 1044 266 73 24 0 chrX 60277341 60277382 -106372914 + (CAAAA)n Simple_repeat Simple_repeat 1 42 0 3 1044 192 40 0 0 chrX 60277521 60277546 -106372750 + (CAA)n Simple_repeat Simple_repeat 2 26 0 3 1044 1076 254 182 12 chrX 60277720 60278131 -106372165 + Lx9 LINE L1 6172 6652 -992 3 1044 817 266 10 0 chrX 60279495 60279687 -106370609 + Lx7 LINE L1 6919 7112 -584 3 1044 237 33 0 0 chrX 60279718 60279748 -106370548 + (TTTTA)n Simple_repeat Simple_repeat 4 33 0 3 1044 921 292 82 46 chrX 60279752 60280031 -106370265 - Lx LINE L1 -26 7434 7141 3 1044 3038 193 102 77 chrX 60280031 60280909 -106369387 - RMER17A2 LTR ERVK -4 902 3 3 1044 921 292 82 46 chrX 60280909 60281042 -106369254 - Lx LINE L1 -320 7140 7007 3 1044 11047 109 21 77 chrX 60281042 60282129 -106368167 + RLTR22_Mur LTR ERVK 1 1057 -791 3 1044 1478 22 6 0 chrX 60282129 60282307 -106367989 + (GAA)n Simple_repeat Simple_repeat 2 180 0 3 1044 11047 109 21 77 chrX 60282307 60283176 -106367120 + RLTR22_Mur LTR ERVK 1058 1848 0 3 1044 1228 280 64 52 chrX 60283177 60284080 -106366216 - Lx LINE L1 -574 6886 5781 3 1044 3637 135 18 13 chrX 60284080 60284688 -106365608 - Lx LINE L1 -2 6652 6042 3 1044 976 313 75 102 chrX 60284688 60284710 -106365586 - Lx LINE L1 -1406 6054 6043 3 1044 4729 131 4 1 chrX 60284710 60285454 -106364842 - L1_Mus3 LINE L1 -7 6631 5886 3 1044 2243 158 10 154 chrX 60285454 60286615 -106363681 - Lx LINE L1 -606 6048 5163 3 1044 318 232 159 12 chrX 60286648 60286818 -106363478 - L1M4c LINE L1 -5141 1243 1049 3 1044 330 67 0 0 chrX 60287801 60287846 -106362450 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 3 1044 225 0 0 0 chrX 60288095 60288120 -106362176 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 3 1044 410 0 20 0 chrX 60288124 60288174 -106362122 + (TTG)n Simple_repeat Simple_repeat 2 52 0 3 1044 468 0 0 0 chrX 60288913 60288965 -106361331 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 1044 255 174 0 0 chrX 60289420 60289434 -106360862 + A-rich Low_complexity Low_complexity 1 14 0 3 1044 1015 122 7 0 chrX 60289434 60289581 -106360715 + B1_Mus1 SINE Alu 1 148 0 3 1044 255 174 0 0 chrX 60289581 60289635 -106360661 + A-rich Low_complexity Low_complexity 15 68 0 3 1044 220 374 58 35 chrX 60289635 60289807 -106360489 - L2a LINE L2 -195 3231 3056 3 1044 1727 147 155 25 chrX 60289937 60290163 -106360133 + RLTR9E LTR ERVK 1 280 -129 3 1044 7397 56 1 5 chrX 60290163 60291103 -106359193 + L1Md_F2 LINE L1 5647 6582 0 3 1044 1727 147 155 25 chrX 60291103 60291238 -106359058 + RLTR9E LTR ERVK 281 409 0 3 1044 4272 156 70 78 chrX 60291371 60292576 -106357720 + ETnERV2-int LTR ERVK 108 2085 -5321 3 1044 2560 183 53 24 chrX 60292573 60293117 -106357179 + ETnERV2-int LTR ERVK 2428 2987 -4419 3 1045 3485 157 82 68 chrX 60293133 60294698 -106355598 + ETnERV2-int LTR ERVK 2371 4384 -1424 3 1045 1220 175 21 67 chrX 60294667 60294934 -106355362 + ETnERV2-int LTR ERVK 6222 6333 -1073 3 1045 4621 56 3 3 chrX 60294934 60295512 -106354784 - L1Md_F2 LINE L1 -11 6571 5994 3 1045 1220 123 9 73 chrX 60295512 60295604 -106354692 + ETnERV2-int LTR ERVK 6334 6426 -980 3 1045 387 78 0 59 chrX 60295702 60295770 -106354526 + RLTR45-int LTR ERVK 6009 6072 -1172 3 1045 1425 160 16 4 chrX 60295773 60296024 -106354272 + ETnERV3-int LTR ERVK 5527 5780 -28 3 1045 1732 196 91 12 chrX 60296033 60296505 -106353791 + RLTR13D6 LTR ERVK 1 539 -363 3 1045 465 70 0 112 chrX 60296505 60296585 -106353711 + ETnERV2-int LTR ERVK 7331 7401 -5 3 1045 1921 155 91 24 chrX 60296589 60296972 -106353324 + RLTR9E LTR ERVK 1 409 0 3 1045 327 179 0 0 chrX 60296995 60297051 -106353245 - RMER6C LTR ERVK -4 716 661 3 1045 261 206 41 0 chrX 60297183 60297256 -106353040 + (AACTG)n Simple_repeat Simple_repeat 2 77 0 3 1045 363 246 35 50 chrX 60297257 60297398 -106352898 - RMER6C LTR ERVK -312 378 240 3 1045 880 255 104 75 chrX 60297400 60297658 -106352638 + MTD LTR MaLR 79 360 -59 3 1045 1437 164 13 134 chrX 60297658 60298032 -106352264 - ORR1A4 LTR MaLR 0 329 1 3 1045 880 255 104 75 chrX 60298032 60298091 -106352205 + MTD LTR MaLR 361 405 -14 3 1045 3917 144 18 8 chrX 60298926 60299585 -106350711 - Lx2A1 LINE L1 -516 6492 5827 3 1045 780 159 0 0 chrX 60299586 60299724 -106350572 + T-rich Low_complexity Low_complexity 3 140 0 3 1045 599 102 269 0 chrX 60299733 60299841 -106350455 - B1_Mus1 SINE Alu 0 148 12 3 1045 334 286 20 20 chrX 60299769 60299869 -106350427 - B4 SINE B4 -123 169 70 3 1045 3072 133 12 8 chrX 60299890 60300399 -106349897 + Lx2A1 LINE L1 6497 7007 -1 3 1045 438 357 75 32 chrX 60300631 60300909 -106349387 + Arthur1C DNA Tip100 7 296 -67 3 1045 340 301 54 66 chrX 60301321 60301604 -106348692 - MTEb LTR MaLR -2 377 51 3 1045 963 50 0 0 chrX 60301625 60301746 -106348550 + (TCTA)n Simple_repeat Simple_repeat 2 122 0 3 1045 1492 219 61 8 chrX 60301746 60302123 -106348173 - Lx4B LINE L1 -9 7049 6653 3 1045 1501 225 204 7 chrX 60302283 60302715 -106347581 - Lx9 LINE L1 -140 7504 6988 3 1045 3243 239 81 12 chrX 60304181 60305106 -106345190 + L1_Mur3 LINE L1 355 1343 -6385 3 1045 1585 237 19 43 chrX 60305148 60305664 -106344632 + L1_Mur3 LINE L1 4217 4720 -1160 3 1045 8416 141 28 3 chrX 60305716 60307128 -106343168 - Lx3_Mus LINE L1 -8 7001 5584 3 1045 8614 166 63 29 chrX 60307190 60309048 -106341248 - L1_Mur2 LINE L1 -1084 4793 2873 3 1045 1340 179 29 0 chrX 60309390 60309630 -106340666 + RMER6D LTR ERVK 1 247 -473 3 1045 1190 216 0 0 chrX 60309609 60309831 -106340465 + RMER6D LTR ERVK 495 716 -4 3 1045 49 87 0 0 chrX 60309964 60310090 -106340206 + AT_rich Low_complexity Low_complexity 1 126 0 3 1045 265 243 55 18 chrX 60311662 60311771 -106338525 - Lx9 LINE L1 -22 7622 7510 3 1045 384 22 0 0 chrX 60311773 60311818 -106338478 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 1045 629 291 58 89 chrX 60311992 60312373 -106337923 + ORR1D2 LTR MaLR 2 370 0 3 1045 610 226 105 0 chrX 60313308 60313441 -106336855 + B1_Mur4 SINE Alu 2 148 -2 3 1045 21 36 0 0 chrX 60314284 60314312 -106335984 + AT_rich Low_complexity Low_complexity 1 28 0 3 1045 297 0 0 0 chrX 60315190 60315223 -106335073 + (TTAA)n Simple_repeat Simple_repeat 2 34 0 3 1045 2130 198 5 10 chrX 60315225 60315634 -106334662 - Lx4A LINE L1 -14 7044 6638 3 1045 514 279 0 35 chrX 60315778 60315919 -106334377 - B1_Mur2 SINE Alu -9 140 5 3 1045 260 338 14 0 chrX 60316539 60316610 -106333686 - ID4_ SINE ID -11 72 1 3 1045 23 0 0 0 chrX 60317067 60317090 -106333206 + AT_rich Low_complexity Low_complexity 1 23 0 3 1045 28 29 0 0 chrX 60317582 60317617 -106332679 + AT_rich Low_complexity Low_complexity 1 35 0 3 1045 4723 235 47 21 chrX 60317674 60317821 -106332475 - Lx5 LINE L1 -25 7025 6874 3 1045 474 18 0 0 chrX 60317821 60317876 -106332420 + (TC)n Simple_repeat Simple_repeat 1 55 0 3 1045 1479 206 33 3 chrX 60317877 60318184 -106332112 - Lx2 LINE L1 -5 6992 6677 3 1045 4723 235 47 21 chrX 60318184 60318739 -106331557 - Lx5 LINE L1 -177 6873 6318 3 1045 229 26 26 26 chrX 60318739 60318778 -106331518 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 3 1045 4723 235 47 21 chrX 60318778 60319221 -106331075 - Lx5 LINE L1 -733 6317 5847 3 1045 7041 93 1 13 chrX 60319226 60320217 -106330079 - L1Md_F2 LINE L1 0 6582 5604 3 1045 12610 104 35 7 chrX 60320215 60322890 -106327406 - L1Md_F LINE L1 -2854 3029 277 3 1045 1500 165 8 4 chrX 60322890 60323140 -106327156 - L1VL1 LINE L1 -6156 266 16 3 1045 9880 194 30 12 chrX 60323138 60324147 -106326149 - Lx5 LINE L1 -23 5854 4836 3 1045 288 0 0 0 chrX 60324147 60324179 -106326117 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 4 1045 9880 194 30 12 chrX 60324179 60325274 -106325022 - Lx5 LINE L1 -1042 4835 3714 3 1045 775 206 45 5 chrX 60325274 60325462 -106324834 - RLTR11A LTR ERVK 0 528 332 4 1045 1148 161 0 44 chrX 60325463 60325691 -106324605 - L1_Mur2 LINE L1 -2202 3675 3458 4 1045 590 181 0 8 chrX 60325731 60325865 -106324431 + L1_Mur2 LINE L1 3143 3275 -2602 4 1045 1222 200 12 0 chrX 60325856 60326096 -106324200 - Lx3C LINE L1 -528 6448 6206 4 1045 1256 223 20 3 chrX 60326084 60326381 -106323915 + Lx3C LINE L1 5927 6228 -748 4 1045 697 165 0 8 chrX 60326430 60326564 -106323732 - Lx2B LINE L1 -15 6985 6853 4 1045 740 134 60 0 chrX 60326565 60326699 -106323597 + Lx2B LINE L1 6584 6725 -275 4 1045 325 231 85 0 chrX 60327507 60327637 -106322659 - Lx9 LINE L1 -24 7620 7480 4 1045 1277 223 68 3 chrX 60327705 60328043 -106322253 - Lx9 LINE L1 -128 7516 7157 4 1045 224 210 38 6 chrX 60328216 60328381 -106321915 + (TA)n Simple_repeat Simple_repeat 1 170 0 4 1045 4746 179 28 6 chrX 60328669 60329553 -106320743 - Lx2 LINE L1 0 6997 6094 4 1045 1044 206 14 0 chrX 60330087 60330306 -106319990 + URR1A DNA MER1_type 5 226 0 4 1045 341 293 172 16 chrX 60330446 60330666 -106319630 + L1MD LINE L1 5102 5355 -791 4 1045 5959 80 1 19 chrX 60330700 60331529 -106318767 + L1Md_F2 LINE L1 5769 6582 0 4 1045 3114 203 94 22 chrX 60331749 60332467 -106317829 + Lx9 LINE L1 6824 7599 -45 4 1045 2254 47 4 0 chrX 60332467 60332745 -106317551 + L1Md_F2 LINE L1 6301 6579 -3 4 1045 3114 203 94 22 chrX 60332745 60332788 -106317508 + Lx9 LINE L1 7600 7640 -4 4 1045 336 357 29 54 chrX 60333176 60333454 -106316842 - L1MB5 LINE L1 -17 6157 5887 4 1045 495 45 0 0 chrX 60335490 60335556 -106314740 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 1045 207 0 0 0 chrX 60336233 60336256 -106314040 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1045 213 183 0 0 chrX 60336555 60336615 -106313681 + T-rich Low_complexity Low_complexity 1 60 0 4 1045 1041 88 7 7 chrX 60336615 60336763 -106313533 - B1_Mus1 SINE Alu 0 148 1 4 1045 342 303 109 34 chrX 60336861 60337008 -106313288 + B3 SINE B2 46 203 -13 4 1045 460 258 7 22 chrX 60337033 60337168 -106313128 + RMER5 LTR ERV1 385 517 -17 4 1045 208 394 58 7 chrX 60337208 60337346 -106312950 + L2a LINE L2 3036 3180 -246 4 1045 534 108 0 0 chrX 60338790 60338873 -106311423 + (TTTA)n Simple_repeat Simple_repeat 2 84 0 4 1045 4325 118 12 8 chrX 60338920 60339575 -106310721 - Lx LINE L1 -241 6413 5756 4 1045 258 81 0 0 chrX 60339973 60340010 -106310286 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 1045 21 71 0 0 chrX 60340254 60340296 -106310000 + AT_rich Low_complexity Low_complexity 1 42 0 4 1045 320 400 23 23 chrX 60340562 60340782 -106309514 + MIR SINE MIR 30 249 -13 4 1045 2115 151 0 14 chrX 60341151 60341513 -106308783 - Lx LINE L1 0 6654 6298 4 1045 279 234 0 0 chrX 60341537 60341614 -106308682 + (TA)n Simple_repeat Simple_repeat 1 77 0 4 1045 325 24 0 24 chrX 60341614 60341656 -106308640 - HAL1-3A_ME LINE L1 -846 2012 1972 4 1045 25 65 0 0 chrX 60342254 60342300 -106307996 + AT_rich Low_complexity Low_complexity 1 46 0 4 1045 380 283 175 23 chrX 60343810 60344120 -106306176 + Lx7 LINE L1 5501 5889 -1807 4 1045 26 0 0 0 chrX 60344128 60344154 -106306142 + AT_rich Low_complexity Low_complexity 1 26 0 4 1045 5093 201 34 68 chrX 60344154 60345441 -106304855 - Lx4B LINE L1 -3 7055 5813 4 1045 16035 164 123 22 chrX 60345449 60346175 -106304121 - Lx4B LINE L1 -415 5462 4732 4 1045 186 71 0 0 chrX 60346175 60346203 -106304093 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 1045 16035 164 123 22 chrX 60346203 60348539 -106301757 - Lx4B LINE L1 -1146 4731 2053 4 1045 282 29 0 0 chrX 60348539 60348574 -106301722 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1045 16035 164 123 22 chrX 60348574 60349056 -106301240 - Lx4B LINE L1 -3825 2052 1562 4 1045 1639 218 99 14 chrX 60349056 60349654 -106300642 - Lx4B LINE L1 -4518 1359 644 4 1045 23 0 0 0 chrX 60349757 60349780 -106300516 + AT_rich Low_complexity Low_complexity 1 23 0 4 1045 563 290 118 20 chrX 60350286 60350620 -106299676 + L1MB8 LINE L1 5523 5890 -288 4 1045 3464 96 28 2 chrX 60350617 60351127 -106299169 - L1_Mm LINE L1 -345 5538 5016 4 1045 1500 98 47 0 chrX 60351129 60351343 -106298953 + L1_Mus2 LINE L1 6343 6566 0 4 1045 567 338 62 12 chrX 60351547 60351790 -106298506 - MER2 DNA MER2_type -20 325 71 4 1045 314 371 54 50 chrX 60351863 60352161 -106298135 - L2 LINE L2 -838 2581 2283 4 1045 274 277 0 0 chrX 60352381 60352454 -106297842 + ID4 SINE ID 11 83 0 4 1045 211 370 0 0 chrX 60353560 60353641 -106296655 + L3 LINE CR1 2966 3046 -1443 4 1045 428 377 0 42 chrX 60355670 60355814 -106294482 + RSINE1 SINE B4 4 141 -24 4 1045 587 292 76 112 chrX 60355943 60356336 -106293960 - MTE2a LTR MaLR 0 379 1 4 1045 2578 59 0 0 chrX 60357293 60357613 -106292683 - L1_Mm LINE L1 -177 5706 5387 4 1045 3933 62 8 8 chrX 60357617 60358140 -106292156 + L1Md_F2 LINE L1 6060 6582 0 4 1045 8532 40 1 1 chrX 60358246 60359294 -106291002 + L1Md_F2 LINE L1 4538 5585 -298 4 1045 7836 49 4 3 chrX 60359295 60360288 -106290008 + L1Md_F2 LINE L1 5587 6580 -2 4 1045 21 36 0 0 chrX 60361016 60361044 -106289252 + AT_rich Low_complexity Low_complexity 1 28 0 4 1045 186 43 0 0 chrX 60361669 60361692 -106288604 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1045 365 164 0 14 chrX 60361695 60361769 -106288527 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 4 1045 315 0 0 0 chrX 60363443 60363478 -106286818 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1045 193 355 65 22 chrX 60364398 60364490 -106285806 - MIR SINE MIR -86 122 27 4 1045 975 306 147 24 chrX 60364759 60365613 -106284683 - Lx6 LINE L1 -4 7456 6249 4 1045 209 275 12 12 chrX 60365636 60365717 -106284579 + CT-rich Low_complexity Low_complexity 4 84 0 4 1045 573 268 321 1 chrX 60366000 60366310 -106283986 + MTD LTR MaLR 1 416 -3 4 1045 276 286 68 10 chrX 60366496 60366629 -106283667 - L1_Mur1 LINE L1 -554 5635 5484 4 1045 962 286 163 37 chrX 60366652 60366930 -106283366 - Lx6 LINE L1 -26 7434 7146 4 1045 707 181 6 30 chrX 60366930 60367095 -106283201 + Lx LINE L1 6494 6654 0 4 1045 962 286 163 37 chrX 60367095 60367251 -106283045 - Lx6 LINE L1 -315 7145 6945 4 1045 234 272 33 142 chrX 60367265 60367385 -106282911 + RLTR12B LTR ERVK 161 267 -261 4 1045 352 300 0 0 chrX 60367782 60367889 -106282407 - Lx6 LINE L1 -581 6879 6796 4 1045 3456 174 48 19 chrX 60367927 60368600 -106281696 - RLTR17 LTR ERVK 0 692 1 4 1045 658 286 94 48 chrX 60370797 60371296 -106279000 + L1M2 LINE L1 4515 5036 -1107 4 1045 8491 145 14 9 chrX 60371337 60372790 -106277506 + Lx2 LINE L1 5515 6975 -22 4 1045 220 356 0 0 chrX 60373060 60373133 -106277163 + (CA)n Simple_repeat Simple_repeat 1 73 0 4 1045 41100 4 10 0 chrX 60373610 60380120 -106270176 - L1Md_A LINE L1 0 6582 1 4 1045 640 287 10 58 chrX 60380222 60380429 -106269867 - B3 SINE B2 -15 201 5 4 1045 24 85 0 0 chrX 60380441 60380500 -106269796 + AT_rich Low_complexity Low_complexity 1 59 0 4 1045 22 35 0 0 chrX 60380509 60380538 -106269758 + AT_rich Low_complexity Low_complexity 1 29 0 4 1045 422 36 18 0 chrX 60380560 60380616 -106269680 + (GA)n Simple_repeat Simple_repeat 2 58 0 4 1045 941 88 80 0 chrX 60380624 60380761 -106269535 + B1_Mus1 SINE Alu 1 148 0 4 1045 915 58 36 0 chrX 60380771 60380908 -106269388 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 4 1045 455 98 60 24 chrX 60380908 60380992 -106269304 + B2_Mm2 SINE B2 106 192 -3 4 1045 224 149 20 41 chrX 60380992 60381041 -106269255 + GA-rich Low_complexity Low_complexity 1 48 0 4 1045 211 167 37 49 chrX 60381208 60381290 -106269006 + (TATAA)n Simple_repeat Simple_repeat 3 83 0 4 1045 2343 179 50 4 chrX 60381299 60381797 -106268499 + Lx3C LINE L1 6453 6973 -3 4 1045 230 264 168 7 chrX 60382037 60382186 -106268110 + Arthur1 DNA Tip100 3771 3943 -4 4 1045 567 260 90 39 chrX 60382711 60382867 -106267429 - RSINE1 SINE B4 0 165 2 4 1045 7488 223 57 48 chrX 60383323 60386424 -106263872 - Lx6 LINE L1 -62 7398 4264 4 1045 21 0 0 0 chrX 60386439 60386460 -106263836 + AT_rich Low_complexity Low_complexity 1 21 0 4 1045 1171 247 58 101 chrX 60386583 60387022 -106263274 + Lx9 LINE L1 7064 7488 -156 4 1045 402 21 0 0 chrX 60387022 60387069 -106263227 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1045 252 0 0 0 chrX 60387069 60387096 -106263200 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 1045 1171 247 58 101 chrX 60387096 60387258 -106263038 + Lx9 LINE L1 7489 7639 -5 4 1045 225 175 0 0 chrX 60387327 60387367 -106262929 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1045 704 250 147 0 chrX 60387617 60387801 -106262495 + B3 SINE B2 1 211 -5 4 1045 23 33 0 0 chrX 60387933 60387963 -106262333 + AT_rich Low_complexity Low_complexity 1 30 0 4 1045 347 310 65 29 chrX 60388438 60388763 -106261533 - L1M4c LINE L1 -4760 2090 1871 4 1045 30 59 0 0 chrX 60388951 60389002 -106261294 + AT_rich Low_complexity Low_complexity 1 51 0 4 1045 1305 229 118 0 chrX 60389052 60389424 -106260872 - Lx9 LINE L1 -15 7629 7214 4 1045 428 344 8 0 chrX 60389616 60389738 -106260558 + B3A SINE B2 19 141 -57 4 1045 372 103 0 0 chrX 60389751 60389809 -106260487 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 1045 378 0 0 0 chrX 60390341 60390383 -106259913 + (T)n Simple_repeat Simple_repeat 1 42 0 4 1045 337 309 54 54 chrX 60390465 60390595 -106259701 - L1M4c LINE L1 -5746 1033 904 4 1045 186 118 0 0 chrX 60390865 60390899 -106259397 + (T)n Simple_repeat Simple_repeat 1 34 0 4 1045 23 0 0 0 chrX 60392360 60392383 -106257913 + AT_rich Low_complexity Low_complexity 1 23 0 4 1045 488 276 109 11 chrX 60392398 60392581 -106257715 + Lx8 LINE L1 6230 6430 -1043 4 1045 438 94 0 0 chrX 60392641 60392705 -106257591 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 1045 829 352 135 17 chrX 60392729 60393417 -106256879 + Lx8 LINE L1 6416 7184 -289 4 1045 201 133 0 0 chrX 60393476 60393506 -106256790 + (TTG)n Simple_repeat Simple_repeat 2 31 0 4 1045 31910 98 16 11 chrX 60393834 60395206 -106255090 - L1Md_F2 LINE L1 -4 6578 5173 4 1045 1165 54 0 45 chrX 60395206 60395361 -106254935 - B1_Mus1 SINE Alu 0 148 1 4 1045 31910 102 21 9 chrX 60395361 60400135 -106250161 - L1Md_F2 LINE L1 -711 5172 364 4 1045 483 63 0 0 chrX 60400204 60400267 -106250029 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 5 1045 277 316 24 88 chrX 60400310 60400435 -106249861 + MLT1E LTR MaLR 511 627 -26 5 1045 615 283 118 16 chrX 60401222 60401409 -106248887 + B3 SINE B2 11 216 0 5 1045 432 0 0 0 chrX 60401646 60401694 -106248602 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1045 30 59 0 0 chrX 60401742 60401793 -106248503 + AT_rich Low_complexity Low_complexity 1 51 0 5 1045 244 233 90 30 chrX 60402384 60402517 -106247779 - L1MC4 LINE L1 -450 7592 7452 5 1045 21 36 0 0 chrX 60402913 60402941 -106247355 + AT_rich Low_complexity Low_complexity 1 28 0 5 1045 23 33 0 0 chrX 60402951 60402981 -106247315 + AT_rich Low_complexity Low_complexity 1 30 0 5 1045 1462 281 50 31 chrX 60402989 60403362 -106246934 - Lx7 LINE L1 -583 7113 6732 5 1045 260 53 0 26 chrX 60403362 60403401 -106246895 + (TTA)n Simple_repeat Simple_repeat 2 39 0 5 1045 1462 281 50 31 chrX 60403401 60403509 -106246787 - Lx7 LINE L1 -965 6731 6624 5 1045 474 18 0 0 chrX 60403622 60403677 -106246619 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 1045 222 128 0 0 chrX 60404791 60404830 -106245466 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 1045 690 289 0 30 chrX 60405475 60405678 -106244618 + Lx6 LINE L1 7264 7460 0 5 1045 246 231 0 0 chrX 60406391 60406456 -106243840 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1045 1206 63 6 0 chrX 60406738 60406897 -106243399 + L1Md_F2 LINE L1 5817 5976 -606 5 1045 1911 131 10 3 chrX 60407974 60408266 -106242030 - L1_Mus3 LINE L1 -430 6208 5915 5 1045 200 200 18 0 chrX 60408547 60408602 -106241694 + GA-rich Low_complexity Low_complexity 3 58 0 5 1045 567 147 0 0 chrX 60408779 60408881 -106241415 + (TA)n Simple_repeat Simple_repeat 2 103 0 5 1045 957 135 0 0 chrX 60408883 60409024 -106241272 - B1_Mus1 SINE Alu -6 142 2 5 1045 423 0 0 0 chrX 60409058 60409105 -106241191 + (CATAA)n Simple_repeat Simple_repeat 2 48 0 5 1045 22 0 0 0 chrX 60409388 60409410 -106240886 + AT_rich Low_complexity Low_complexity 1 22 0 5 1045 616 294 76 62 chrX 60409513 60409723 -106240573 - ID_B1 SINE B4 -3 221 9 5 1045 693 167 0 0 chrX 60409840 60409966 -106240330 + (TA)n Simple_repeat Simple_repeat 1 126 0 5 1045 1923 176 21 57 chrX 60410559 60410963 -106239333 + Lx4A LINE L1 6007 6591 -869 5 1045 327 254 85 17 chrX 60411329 60411505 -106238791 + L1MA7 LINE L1 6047 6234 -57 5 1045 995 251 15 12 chrX 60412073 60412404 -106237892 + L1_Rod LINE L1 1303 1634 -4213 5 1045 517 297 71 5 chrX 60412410 60412594 -106237702 + Lx6 LINE L1 6579 6752 -708 5 1045 1057 113 0 10 chrX 60412598 60412803 -106237493 + (GAAA)n Simple_repeat Simple_repeat 1 202 0 5 1045 334 269 145 94 chrX 60412809 60413041 -106237255 + L1VL1 LINE L1 36 385 -6037 5 1045 511 239 44 7 chrX 60413199 60413334 -106236962 + L1Md_F LINE L1 664 803 -5813 5 1045 27352 166 8 134 chrX 60413342 60413948 -106236348 + L1Md_F LINE L1 725 1250 -4633 5 1045 252 0 0 0 chrX 60413948 60413976 -106236320 + (TAA)n Simple_repeat Simple_repeat 2 29 0 5 1045 27352 128 7 19 chrX 60413976 60416142 -106234154 + L1Md_F LINE L1 1251 3422 -2461 5 1045 2314 96 12 6 chrX 60416142 60416477 -106233819 - L1_Mus1 LINE L1 0 6567 6231 5 1045 27352 128 7 19 chrX 60416477 60418822 -106231474 + L1Md_F LINE L1 3423 5704 -179 5 1045 1806 178 3 13 chrX 60418822 60419136 -106231160 + RLTR10E LTR ERVK 1 311 0 5 1045 1080 69 69 81 chrX 60419136 60419310 -106230986 + RLTR10-int LTR ERVK 1 202 -1785 5 1045 234 300 0 0 chrX 60419310 60419360 -106230936 + RLTR27 LTR ERVK 223 272 -37 5 1045 696 165 0 0 chrX 60419362 60419477 -106230819 + RLTR10-int LTR ERVK 224 338 -7243 5 1045 589 172 0 0 chrX 60419477 60419599 -106230697 + RLTR10-int LTR ERVK 748 869 -6712 5 1045 1043 185 154 12 chrX 60419604 60419850 -106230446 + IAPEY3-int LTR ERVK 323 603 -4803 5 1045 302 299 17 8 chrX 60420016 60420134 -106230162 + IAPEY3-int LTR ERVK 822 940 -5602 5 1045 255 279 0 0 chrX 60420195 60420263 -106230033 + IAPEY3-int LTR ERVK 1499 1566 -6015 5 1045 311 164 36 0 chrX 60420280 60420335 -106229961 + IAP-d-int LTR ERVK 447 503 -6039 5 1045 1399 128 102 0 chrX 60420335 60420561 -106229735 + IAP-d-int LTR ERVK 5007 5255 -1287 5 1045 4297 111 8 1 chrX 60420561 60421244 -106229052 + IAPEY3-int LTR ERVK 6965 7680 0 5 1045 1959 155 3 3 chrX 60421244 60421555 -106228741 + RLTR10E LTR ERVK 1 311 0 5 1045 6207 94 12 0 chrX 60421555 60422413 -106227883 + L1_Mus1 LINE L1 5700 6567 0 5 1045 935 42 8 0 chrX 60422434 60422554 -106227742 + (GAAA)n Simple_repeat Simple_repeat 1 121 0 5 1045 264 205 92 67 chrX 60422567 60422687 -106227609 + RLTR25B LTR ERVK 399 521 -507 5 1045 728 94 0 36 chrX 60422603 60422699 -106227597 + B1_Mus2 SINE Alu 42 137 -10 5 1045 300 53 0 0 chrX 60422699 60422737 -106227559 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 5 1045 728 94 0 36 chrX 60422737 60422750 -106227546 + B1_Mus2 SINE Alu 138 147 0 5 1045 363 98 0 0 chrX 60422752 60422813 -106227483 + (GAAA)n Simple_repeat Simple_repeat 3 63 0 5 130 14205 80 5 7 chrX 60422819 60424771 -106225525 + L1Md_F2 LINE L1 3630 5577 -306 5 1046 7584 73 0 0 chrX 60424780 60425763 -106224533 + L1Md_F2 LINE L1 5587 6569 -13 5 1046 597 137 15 8 chrX 60425764 60425896 -106224400 + GA-rich Low_complexity Low_complexity 4 136 0 5 1046 524 240 19 58 chrX 60425904 60426059 -106224237 + Lx6 LINE L1 6741 6889 -571 5 1046 2315 224 176 21 chrX 60426079 60426687 -106223609 - RMER19A LTR ERVK -1 736 35 5 1046 380 214 119 0 chrX 60426687 60426771 -106223525 + Lx6 LINE L1 6539 6632 -828 5 1046 1249 290 28 33 chrX 60426798 60427222 -106223074 + Lx6 LINE L1 7009 7430 -30 5 1046 465 321 71 78 chrX 60427216 60427426 -106222870 - L1MA5 LINE L1 -224 6076 5888 5 1046 1125 62 7 0 chrX 60427426 60427572 -106222724 - B1_Mus2 SINE Alu 0 147 1 5 1046 498 306 68 17 chrX 60427572 60427925 -106222371 - L1MA5 LINE L1 -413 5887 5517 5 1046 21 0 0 0 chrX 60427976 60427997 -106222299 + AT_rich Low_complexity Low_complexity 1 21 0 5 1046 314 269 127 7 chrX 60428098 60428240 -106222056 + L1M2 LINE L1 3445 3603 -2540 5 1046 23 0 0 0 chrX 60428388 60428411 -106221885 + AT_rich Low_complexity Low_complexity 1 23 0 5 1046 395 301 0 42 chrX 60428982 60429100 -106221196 + MTEa LTR MaLR 264 376 -3 5 1046 25 0 0 0 chrX 60429279 60429304 -106220992 + AT_rich Low_complexity Low_complexity 1 25 0 5 1046 477 330 61 85 chrX 60430006 60430384 -106219912 - RLTR41 LTR ERV1 0 446 78 5 1046 21 36 0 0 chrX 60430840 60430868 -106219428 + AT_rich Low_complexity Low_complexity 1 28 0 5 1046 381 360 18 96 chrX 60431029 60431144 -106219152 + Tigger5 DNA MER2_type 3 106 -2300 5 1046 364 67 0 32 chrX 60431144 60431206 -106219090 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 1046 381 360 18 96 chrX 60431206 60431308 -106218988 + Tigger5 DNA MER2_type 107 203 -2203 5 1046 230 307 40 0 chrX 60431322 60431423 -106218873 + Tigger5 DNA MER2_type 2300 2404 -2 5 1046 213 154 26 0 chrX 60432305 60432344 -106217952 + A-rich Low_complexity Low_complexity 3 42 0 5 1046 261 0 0 0 chrX 60432529 60432558 -106217738 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 1046 4066 151 120 14 chrX 60432735 60432834 -106217462 + L1VL2 LINE L1 466 561 -6073 5 1046 180 0 0 0 chrX 60432834 60432854 -106217442 + (ACCTG)n Simple_repeat Simple_repeat 1 20 0 5 1046 14105 128 52 7 chrX 60432854 60436197 -106214099 + L1VL2 LINE L1 562 4066 -1817 5 1046 746 156 104 0 chrX 60436196 60436289 -106214007 + L1VL2 LINE L1 4706 4802 -1081 5 1046 387 0 0 0 chrX 60436289 60436332 -106213964 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1046 746 156 104 0 chrX 60436332 60436392 -106213904 + L1VL2 LINE L1 4803 4873 -1010 5 1046 22 35 0 0 chrX 60436457 60436486 -106213810 + AT_rich Low_complexity Low_complexity 1 29 0 5 1046 1424 173 0 0 chrX 60436654 60436902 -106213394 - L1_Mus4 LINE L1 -6 6630 6383 5 1046 3035 134 19 8 chrX 60436902 60437384 -106212912 + L1_Mus4 LINE L1 5936 6422 -214 5 1046 280 227 0 1 chrX 60437363 60437441 -106212855 + L1VL2 LINE L1 4863 4968 -1178 5 1046 211 211 0 0 chrX 60437920 60437958 -106212338 + T-rich Low_complexity Low_complexity 5 42 0 5 1046 4724 83 0 0 chrX 60437962 60438591 -106211705 - L1_Mus1 LINE L1 0 6567 5939 5 1046 201 94 0 0 chrX 60438599 60438631 -106211665 + (TTG)n Simple_repeat Simple_repeat 3 34 0 5 1046 1056 95 7 0 chrX 60438631 60438778 -106211518 - B1_Mus1 SINE Alu 0 148 1 5 1046 360 100 33 0 chrX 60438778 60438838 -106211458 - L1_Mus1 LINE L1 -605 5962 5901 5 1046 879 80 0 0 chrX 60438818 60438930 -106211366 + L1_Mus1 LINE L1 5797 5908 -659 5 1046 204 40 0 0 chrX 60439179 60439204 -106211092 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 1046 564 29 0 0 chrX 60439220 60439290 -106211006 + (GA)n Simple_repeat Simple_repeat 1 70 0 5 1046 2092 125 9 3 chrX 60439808 60440136 -106210160 - L1_Mur2 LINE L1 -1547 4330 4001 5 1046 1728 178 15 17 chrX 60440134 60440576 -106209720 + L1VL4 LINE L1 3681 4051 -2095 5 1046 1795 89 0 11 chrX 60440975 60441236 -106209060 - L1_Mus4 LINE L1 -10 6626 6369 5 1046 350 48 20 0 chrX 60441237 60441292 -106209004 + L1_Mus4 LINE L1 6240 6301 -283 5 1046 407 330 106 32 chrX 60441293 60441481 -106208815 + Tigger5 DNA MER2_type 51 252 -2154 5 1046 481 260 165 19 chrX 60441598 60441908 -106208388 + L1_Mur3 LINE L1 5524 5860 -20 5 1046 276 170 0 0 chrX 60441919 60441972 -106208324 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1046 645 225 22 0 chrX 60442357 60442495 -106207801 - B1_Mur4 SINE Alu -8 142 2 5 1046 1168 248 71 37 chrX 60442507 60442532 -106207764 - MTC LTR MaLR -2 419 391 5 1046 191 36 36 0 chrX 60442532 60442560 -106207736 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 5 1046 1168 248 71 37 chrX 60442560 60442860 -106207436 - MTC LTR MaLR -31 390 84 5 1046 7589 182 53 6 chrX 60442870 60444718 -106205578 - Lx4A LINE L1 -2 7056 5112 5 1046 424 198 0 0 chrX 60444718 60444799 -106205497 - MTC LTR MaLR -335 86 6 5 1046 3103 72 0 2 chrX 60445607 60446014 -106204282 + L1_Mus1 LINE L1 6161 6566 -1 5 1046 3146 267 26 24 chrX 60446051 60447038 -106203258 + L1_Mur3 LINE L1 4556 5544 -336 5 1046 867 295 42 75 chrX 60447036 60447436 -106202860 + Lx7 LINE L1 7043 7429 -267 5 1046 551 312 0 0 chrX 60447721 60447849 -106202447 + ID_B1 SINE B4 91 218 -6 5 1046 245 226 0 45 chrX 60448375 60448538 -106201758 + T-rich Low_complexity Low_complexity 1 155 0 5 1046 1614 77 36 0 chrX 60448832 60449052 -106201244 - L1Md_F2 LINE L1 -478 6104 5877 5 1046 3531 88 11 0 chrX 60449052 60449528 -106200768 + L1_Mus1 LINE L1 6087 6567 0 5 1046 249 169 0 0 chrX 60450038 60450097 -106200199 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1046 8896 106 9 2 chrX 60450947 60453000 -106197296 - L1_Mus1 LINE L1 0 6567 4502 5 1046 3111 79 0 0 chrX 60452992 60453434 -106196862 + L1_Mm LINE L1 1432 1873 -4010 5 1046 24 53 0 0 chrX 60453459 60453497 -106196799 + AT_rich Low_complexity Low_complexity 1 38 0 5 1046 490 219 7 92 chrX 60453636 60453777 -106196519 + B1_Mur3 SINE Alu 21 149 0 5 1046 1164 75 0 0 chrX 60454150 60454297 -106195999 + B1_Mus1 SINE Alu 2 148 0 5 1046 1256 199 10 36 chrX 60454628 60454931 -106195365 + Lx4B LINE L1 5891 6185 -873 5 1046 4244 213 78 12 chrX 60454926 60455922 -106194374 + Lx4B LINE L1 5997 7058 0 5 1046 613 12 37 0 chrX 60455956 60456037 -106194259 + (TAGA)n Simple_repeat Simple_repeat 4 87 0 5 1046 192 152 0 0 chrX 60456039 60456072 -106194224 + A-rich Low_complexity Low_complexity 6 38 0 5 1046 663 190 29 48 chrX 60456073 60456263 -106194033 + RMER6D LTR ERVK 311 525 -195 5 1046 698 131 8 0 chrX 60456720 60456842 -106193454 + (TTCC)n Simple_repeat Simple_repeat 2 124 0 5 1046 2264 158 40 31 chrX 60456953 60457377 -106192919 + RLTR23 LTR ERV1 1 428 -2 6 1046 3613 223 100 27 chrX 60457454 60458412 -106191884 - RLTR25B LTR ERVK 0 1028 1 6 1046 709 289 38 24 chrX 60458670 60458883 -106191413 + ID_B1 SINE B4 6 221 -3 6 1046 844 100 131 0 chrX 60458886 60459016 -106191280 + B1_Mus2 SINE Alu 1 147 0 6 1046 253 92 12 50 chrX 60459018 60459098 -106191198 + A-rich Low_complexity Low_complexity 2 78 0 6 1046 440 325 21 52 chrX 60460491 60460777 -106189519 + Lx9 LINE L1 7292 7568 -76 6 1046 190 405 29 18 chrX 60461110 60461281 -106189015 + L2 LINE L2 1162 1334 -2085 6 1046 324 383 104 44 chrX 60461636 60462021 -106188275 + MLT1H LTR MaLR 138 545 -4 6 1046 22 35 0 0 chrX 60462189 60462218 -106188078 + AT_rich Low_complexity Low_complexity 1 29 0 6 1046 1755 258 83 73 chrX 60462759 60463332 -106186964 - RLTR17 LTR ERVK -83 609 24 6 1046 4166 98 3 8 chrX 60463332 60463947 -106186349 + L1Md_F2 LINE L1 5970 6581 -1 6 1046 1755 258 83 73 chrX 60463947 60463976 -106186320 - RLTR17 LTR ERVK -669 23 1 6 1046 1024 315 89 70 chrX 60464009 60464157 -106186139 - Lx8 LINE L1 -1031 6442 6293 6 1046 1120 52 0 0 chrX 60464157 60464292 -106186004 + B1_Mm SINE Alu 1 135 -12 6 1046 348 0 38 19 chrX 60464294 60464347 -106185949 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 6 1046 1024 315 89 70 chrX 60464347 60464424 -106185872 - Lx8 LINE L1 -1181 6292 6219 6 1046 1821 199 11 45 chrX 60464424 60464699 -106185597 + ORR1B2 LTR MaLR 3 281 -86 6 1046 342 0 0 0 chrX 60464699 60464737 -106185559 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 6 1046 1033 104 0 0 chrX 60464737 60464881 -106185415 - B1_Mus1 SINE Alu -3 145 2 6 1046 1821 199 11 45 chrX 60464881 60464982 -106185314 + ORR1B2 LTR MaLR 282 366 -1 6 1046 1024 315 89 70 chrX 60464982 60465014 -106185282 - Lx8 LINE L1 -1255 6218 6194 6 1046 522 0 0 0 chrX 60465014 60465072 -106185224 + (TCTA)n Simple_repeat Simple_repeat 2 59 0 6 1046 1160 306 45 57 chrX 60465072 60465941 -106184355 - Lx8 LINE L1 -1280 6193 5277 6 1046 409 75 0 0 chrX 60466008 60466075 -106184221 - Lx LINE L1 0 6654 6588 6 1046 1958 161 31 17 chrX 60466075 60466429 -106183867 - Lx2 LINE L1 -435 6562 6204 6 1046 210 37 0 0 chrX 60466437 60466464 -106183832 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1046 243 0 0 0 chrX 60466524 60466551 -106183745 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1046 377 312 0 0 chrX 60466631 60466743 -106183553 + L1_Mur3 LINE L1 3742 3853 -2027 6 1046 842 138 40 0 chrX 60466739 60466891 -106183405 + L1_Mur2 LINE L1 2534 2691 -3186 6 1046 1562 235 78 8 chrX 60466894 60467267 -106183029 + Lx2B LINE L1 6447 6845 -155 6 1046 5305 162 16 14 chrX 60467267 60468223 -106182073 - RMER17B LTR ERVK 0 958 1 6 1046 1645 199 18 21 chrX 60468312 60468651 -106181645 - RMER12 LTR ERVK -981 341 4 6 1046 317 345 98 54 chrX 60468679 60468955 -106181341 - MER92B LTR ERV1 -106 530 243 6 1046 1267 102 0 0 chrX 60468956 60469132 -106181164 + MTB LTR MaLR 1 176 -224 6 1046 362 376 76 31 chrX 60469363 60469745 -106180551 - L2 LINE L2 -1871 1548 1150 6 1046 189 0 0 0 chrX 60470059 60470080 -106180216 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1046 1184 48 0 0 chrX 60470080 60470227 -106180069 - B1_Mus2 SINE Alu 0 147 1 6 1046 456 19 0 0 chrX 60470373 60470426 -106179870 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1046 563 0 0 15 chrX 60470462 60470530 -106179766 + (TTTC)n Simple_repeat Simple_repeat 3 69 0 6 1046 276 271 0 0 chrX 60470550 60470624 -106179672 + L1MB1 LINE L1 5854 5927 -373 6 1046 359 309 54 0 chrX 60470669 60470837 -106179459 + L1MB1 LINE L1 5991 6167 -1 6 1046 21 0 0 0 chrX 60470837 60470858 -106179438 + AT_rich Low_complexity Low_complexity 1 21 0 6 1046 21 0 0 0 chrX 60470885 60470906 -106179390 + AT_rich Low_complexity Low_complexity 1 21 0 6 1046 419 393 38 25 chrX 60471299 60471539 -106178757 + MLT1D LTR MaLR 3 245 -260 6 1046 317 315 93 27 chrX 60471610 60471793 -106178503 - L1M2 LINE L1 -757 5386 5192 6 1046 638 286 87 55 chrX 60471819 60472232 -106178064 + L1M2 LINE L1 5385 5797 -503 6 1046 883 60 33 7 chrX 60472250 60472402 -106177894 + (TTTC)n Simple_repeat Simple_repeat 2 157 0 6 1046 2807 182 14 11 chrX 60472823 60473383 -106176913 + L1Md_F LINE L1 571 1132 -5387 6 1046 718 324 70 53 chrX 60473493 60473848 -106176448 + MLT1B LTR MaLR 28 388 -2 6 1046 562 363 116 24 chrX 60474233 60474611 -106175685 + MTD LTR MaLR 6 418 -1 6 1046 264 304 71 36 chrX 60475640 60475780 -106174516 - ERVL-E-int LTR ERVL -2048 3619 3475 6 1046 397 352 62 62 chrX 60476027 60476221 -106174075 - B3A SINE B2 0 198 5 6 1046 1190 155 56 9 chrX 60476262 60476477 -106173819 - Lx3A LINE L1 -6 6975 6751 6 1046 477 266 23 8 chrX 60476477 60476606 -106173690 - MTD LTR MaLR -288 131 1 6 1046 294 420 99 30 chrX 60476980 60477314 -106172982 + LTR16A LTR ERVL 16 372 -79 6 1046 432 0 0 0 chrX 60477366 60477414 -106172882 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1046 387 0 0 0 chrX 60477414 60477456 -106172840 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 1046 216 111 0 0 chrX 60477457 60477493 -106172803 + (GA)n Simple_repeat Simple_repeat 2 37 0 6 1046 1187 286 95 14 chrX 60477690 60478123 -106172173 - Lx8 LINE L1 -230 7243 6776 6 1046 17346 96 8 9 chrX 60478150 60481374 -106168922 - L1Md_F2 LINE L1 -12 6570 3353 6 1046 4452 136 12 28 chrX 60481373 60482291 -106168005 - L1Md_F2 LINE L1 -4497 1386 481 6 1046 1210 320 143 100 chrX 60482339 60483222 -106167074 - MTC-int LTR MaLR -201 1057 44 6 1046 1839 234 10 23 chrX 60483263 60483661 -106166635 - MTD LTR MaLR -14 405 13 6 1046 1375 262 30 3 chrX 60483749 60484086 -106166210 - Lx8 LINE L1 -766 6707 6362 6 1046 708 288 62 14 chrX 60484086 60484294 -106166002 - MTE2b LTR MaLR 0 379 162 6 1046 351 0 0 0 chrX 60484673 60484712 -106165584 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 1046 1036 255 85 28 chrX 60485157 60485520 -106164776 - ORR1C2 LTR MaLR 0 384 1 6 1046 5435 102 25 28 chrX 60486625 60487489 -106162807 - L1_Mus3 LINE L1 -2 6636 5775 6 1046 431 308 86 5 chrX 60487489 60487675 -106162621 - Lx8 LINE L1 -440 7033 6833 6 1046 2992 80 5 0 chrX 60487672 60488073 -106162223 + L1_Mm LINE L1 5472 5874 -9 6 1046 261 290 16 0 chrX 60488167 60488229 -106162067 - ID4_ SINE ID -16 67 5 6 1046 234 312 54 18 chrX 60488344 60488455 -106161841 - MLT2B4 LTR ERVL -4 552 438 6 1046 293 180 43 36 chrX 60488553 60488691 -106161605 + (TATAA)n Simple_repeat Simple_repeat 2 140 0 6 1046 33 73 0 0 chrX 60489140 60489208 -106161088 + AT_rich Low_complexity Low_complexity 1 68 0 6 1046 1061 81 20 0 chrX 60489683 60489831 -106160465 - L1_Mus1 LINE L1 -2 6565 6415 6 1046 554 60 0 0 chrX 60489831 60489898 -106160398 + L1_Mus1 LINE L1 6113 6179 -388 6 1046 270 273 61 0 chrX 60490491 60490557 -106159739 + MT2B LTR ERVL 5 74 -527 6 1046 222 116 0 0 chrX 60490580 60490623 -106159673 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 1046 1177 295 63 23 chrX 60491400 60491601 -106158695 + MTD LTR MaLR 5 204 -215 6 1046 243 0 0 0 chrX 60491601 60491628 -106158668 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1046 1177 295 63 23 chrX 60491628 60491825 -106158471 + MTD LTR MaLR 205 419 0 6 1046 223 202 47 23 chrX 60491997 60492083 -106158213 + T-rich Low_complexity Low_complexity 5 92 0 6 1046 3564 114 119 2 chrX 60492102 60492697 -106157599 - L1_Mus4 LINE L1 -53 6583 5919 6 1046 318 257 86 76 chrX 60492732 60492930 -106157366 + Lx6 LINE L1 7235 7434 -26 6 1046 3204 172 50 8 chrX 60493105 60493707 -106156589 - Lx2B LINE L1 -32 6968 6342 6 1046 24 32 0 0 chrX 60493708 60493739 -106156557 + AT_rich Low_complexity Low_complexity 1 31 0 6 1046 396 304 78 9 chrX 60493853 60494085 -106156211 - L1MC LINE L1 -3400 2746 2499 6 1046 213 39 0 0 chrX 60494089 60494115 -106156181 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 6 1046 246 32 0 0 chrX 60494345 60494376 -106155920 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 6 1046 240 59 0 0 chrX 60494655 60494689 -106155607 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1046 474 233 22 17 chrX 60494929 60495068 -106155228 + L1M3 LINE L1 5633 5774 -415 6 1046 1943 230 188 14 chrX 60495194 60495517 -106154779 + RMER6C LTR ERVK 1 400 -290 6 1046 492 18 0 0 chrX 60495517 60495574 -106154722 + (GA)n Simple_repeat Simple_repeat 1 57 0 6 1046 1943 230 188 14 chrX 60495574 60495836 -106154460 + RMER6C LTR ERVK 401 687 -3 6 1046 516 356 15 92 chrX 60496250 60496292 -106154004 + B3A SINE B2 1 35 -163 6 1046 215 31 31 0 chrX 60496292 60496324 -106153972 + (TTG)n Simple_repeat Simple_repeat 2 34 0 6 1046 731 329 6 19 chrX 60496324 60496517 -106153779 + B3 SINE B2 33 216 0 6 1046 26 0 0 0 chrX 60497725 60497751 -106152545 + AT_rich Low_complexity Low_complexity 1 26 0 6 1046 238 261 63 94 chrX 60497892 60498019 -106152277 - L1ME1 LINE L1 -158 6021 5899 6 1046 27 73 0 0 chrX 60498086 60498141 -106152155 + AT_rich Low_complexity Low_complexity 1 55 0 6 1046 597 306 17 105 chrX 60498699 60498899 -106151397 + B3A SINE B2 32 214 -2 6 1046 347 313 66 58 chrX 60498920 60499178 -106151118 + L1MD LINE L1 2513 2772 -3374 6 1046 25 0 0 0 chrX 60499377 60499402 -106150894 + AT_rich Low_complexity Low_complexity 1 25 0 6 1046 477 34 0 0 chrX 60499547 60499606 -106150690 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1046 22 0 0 0 chrX 60500030 60500052 -106150244 + AT_rich Low_complexity Low_complexity 1 22 0 1 1046 1630 26 0 0 chrX 60500055 60500248 -106150048 - L1Md_F2 LINE L1 -719 5863 5671 2 1046 4702 52 17 3 chrX 60500250 60500843 -106149453 + L1Md_F2 LINE L1 5972 6572 -10 2 1046 1492 69 0 0 chrX 60501227 60501416 -106148880 - L1_Mus2 LINE L1 -332 5551 5363 2 1046 7541 75 2 7 chrX 60501409 60502454 -106147842 + L1_Mus2 LINE L1 5526 6565 -1 2 1046 510 17 0 0 chrX 60502488 60502547 -106147749 + (TAAA)n Simple_repeat Simple_repeat 4 62 0 3 1046 23 0 0 0 chrX 60502558 60502581 -106147715 + AT_rich Low_complexity Low_complexity 1 23 0 4 1046 391 60 30 0 chrX 60503697 60503764 -106146532 + (TA)n Simple_repeat Simple_repeat 2 70 0 5 1046 489 71 0 0 chrX 60504052 60504122 -106146174 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 1046 2479 215 4 5 chrX 60505523 60506018 -106144278 + Lx4B LINE L1 6421 6925 -133 7 1046 1233 53 0 0 chrX 60506018 60506188 -106144108 + (TC)n Simple_repeat Simple_repeat 2 171 0 8 1046 2478 224 13 42 chrX 60506188 60506246 -106144050 + Lx4B LINE L1 6906 6958 -92 7 1046 5524 183 36 6 chrX 60507370 60508427 -106141869 - Lx4A LINE L1 0 7058 5970 9 1046 3913 126 51 37 chrX 60508452 60509160 -106141136 - RMER17A-int LTR ERVK -1010 718 1 1 1046 4096 119 6 95 chrX 60509160 60509984 -106140312 - RMER17A LTR ERVK 0 751 1 1 1046 2318 138 26 11 chrX 60509985 60510455 -106139841 - Lx4A LINE L1 -1077 5981 5500 9 1046 280 167 56 0 chrX 60510448 60510502 -106139794 + L1_Mur1 LINE L1 4257 4313 -1573 1 1046 297 311 0 26 chrX 60510665 60510741 -106139555 - RSINE1 SINE B4 -86 79 6 1 1046 2801 187 130 49 chrX 60510935 60512106 -106138190 + L1Md_F3 LINE L1 208 1473 -4413 1 1046 675 169 22 30 chrX 60512106 60512240 -106138056 - RLTR13C2 LTR ERVK -12 890 758 1 1046 1890 46 8 20 chrX 60512243 60512489 -106137807 - L1Md_F2 LINE L1 0 6582 6340 1 1046 2960 48 0 0 chrX 60512489 60512841 -106137455 + L1_Mm LINE L1 5459 5810 -73 1 1046 4565 94 24 22 chrX 60512842 60513517 -106136779 - RLTR13C2 LTR ERVK -132 676 1 1 1046 17556 143 19 76 chrX 60513517 60515856 -106134440 + L1Md_F3 LINE L1 2381 4652 -1234 1 1046 2558 48 0 0 chrX 60515856 60516168 -106134128 - L1Md_T LINE L1 0 6582 6271 1 1046 17556 143 19 76 chrX 60516168 60516959 -106133337 + L1Md_F3 LINE L1 4653 5294 -592 1 1046 459 0 0 0 chrX 60516959 60517010 -106133286 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1 1046 17556 98 10 25 chrX 60517010 60518366 -106131930 + L1Md_F3 LINE L1 5295 6631 -7 1 1046 7023 112 4 6 chrX 60518349 60519414 -106130882 + Lx3_Mus LINE L1 4848 5907 -1102 1 1046 711 54 0 0 chrX 60519414 60519506 -106130790 + (GAAA)n Simple_repeat Simple_repeat 4 95 0 2 1046 4680 133 34 39 chrX 60519506 60520027 -106130269 + Lx3_Mus LINE L1 5908 6423 -586 1 1046 968 79 0 0 chrX 60520023 60520149 -106130147 - L1Md_F3 LINE L1 -354 6230 6105 2 1046 2691 56 8 35 chrX 60520149 60520521 -106129775 + L1Md_F3 LINE L1 6222 6583 -1 2 1046 2040 125 12 12 chrX 60520521 60520830 -106129466 + Lx3_Mus LINE L1 6406 6718 -291 1 1046 7402 77 1 0 chrX 60520821 60521782 -106128514 + L1_Mus1 LINE L1 5606 6567 0 2 1046 1727 103 48 0 chrX 60521814 60522087 -106128209 + Lx3_Mus LINE L1 6724 7009 0 1 1046 356 317 99 58 chrX 60522101 60522536 -106127760 - L1M3 LINE L1 -2052 4088 3636 2 1046 447 106 0 0 chrX 60523210 60523276 -106127020 + (TA)n Simple_repeat Simple_repeat 2 67 0 2 1046 6348 28 0 0 chrX 60523844 60524589 -106125707 - L1_Mm LINE L1 -757 5126 4382 2 1046 2358 29 0 0 chrX 60524588 60524862 -106125434 + L1Md_T LINE L1 5313 5586 -297 2 1046 8011 55 0 0 chrX 60524862 60525858 -106124438 + L1Md_T LINE L1 5587 6582 0 2 1046 219 252 146 54 chrX 60525919 60526049 -106124247 - L4 LINE RTE -174 1855 1714 2 1046 512 15 15 0 chrX 60526584 60526649 -106123647 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 1046 26 0 0 0 chrX 60527223 60527249 -106123047 + AT_rich Low_complexity Low_complexity 1 26 0 2 1046 22 35 0 0 chrX 60527472 60527501 -106122795 + AT_rich Low_complexity Low_complexity 1 29 0 3 1046 4974 12 0 0 chrX 60527710 60528272 -106122024 - L1Md_A LINE L1 0 6582 6021 3 1046 1870 224 220 16 chrX 60529221 60529421 -106120875 - Lx7 LINE L1 -5 7691 7410 3 1046 390 74 0 0 chrX 60529421 60529475 -106120821 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1046 1870 224 220 16 chrX 60529475 60529956 -106120340 - Lx7 LINE L1 -287 7409 6872 3 1046 6061 58 6 9 chrX 60529956 60530741 -106119555 - L1Md_F2 LINE L1 -1 6581 5799 3 1046 4713 57 0 0 chrX 60530742 60531336 -106118960 + L1_Mm LINE L1 4817 5410 -473 3 1046 286 233 0 0 chrX 60531336 60531396 -106118900 - Lx7 LINE L1 -819 6877 6818 3 1046 564 273 42 7 chrX 60531396 60531540 -106118756 + MT2A LTR ERVL 1 149 -384 3 1046 482 230 10 0 chrX 60531562 60531662 -106118634 - ORR1C2 LTR MaLR -51 333 233 3 1046 258 349 0 0 chrX 60531667 60531753 -106118543 - ORR1C2 LTR MaLR -289 89 4 3 1046 973 273 65 94 chrX 60532007 60532455 -106117841 - RMER1C Other Other -3 1339 905 3 1046 1486 154 48 10 chrX 60532479 60532506 -106117790 + BGLII LTR ERVK 122 148 -273 3 1046 2928 105 7 0 chrX 60532506 60532924 -106117372 - BGLII LTR ERVK 0 421 1 4 1046 1486 154 48 10 chrX 60532924 60533185 -106117111 + BGLII LTR ERVK 149 421 0 3 1046 807 344 42 31 chrX 60533185 60533542 -106116754 - RMER1C Other Other -474 868 508 3 1046 952 348 81 26 chrX 60533544 60534302 -106115994 - RMER1C Other Other -468 874 338 4 1046 2120 262 21 18 chrX 60534338 60534850 -106115446 - Lx7 LINE L1 -1027 6669 6156 3 1046 247 291 79 0 chrX 60534897 60535086 -106115210 - L1MC4a LINE L1 -466 7416 7213 4 1046 375 359 30 0 chrX 60535779 60535910 -106114386 + B4A SINE B4 85 219 -73 4 1046 25 0 0 0 chrX 60536741 60536766 -106113530 + AT_rich Low_complexity Low_complexity 1 25 0 4 1046 575 255 82 66 chrX 60536802 60537121 -106113175 - L1M2 LINE L1 -735 5577 5254 4 1046 504 0 0 0 chrX 60537488 60537544 -106112752 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 1046 529 271 31 31 chrX 60537885 60538045 -106112251 - MTD LTR MaLR -259 160 1 4 1046 295 228 287 0 chrX 60538049 60538150 -106112146 - MTD LTR MaLR -69 350 221 4 1046 331 341 85 0 chrX 60538338 60538467 -106111829 + L2 LINE L2 2884 3023 -396 4 1046 675 169 0 0 chrX 60538488 60538612 -106111684 + CT-rich Low_complexity Low_complexity 3 126 0 5 1046 207 0 0 0 chrX 60538704 60538727 -106111569 + (TC)n Simple_repeat Simple_repeat 1 23 0 5 1046 357 24 0 0 chrX 60538727 60538768 -106111528 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1046 2314 146 27 7 chrX 60538883 60539296 -106111000 + Lx2 LINE L1 6576 6996 -1 5 1046 203 147 0 0 chrX 60539322 60539356 -106110940 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1046 335 290 46 9 chrX 60539634 60539742 -106110554 - PB1D10 SINE Alu -1 116 5 5 1046 306 353 42 20 chrX 60540190 60540496 -106109800 - L1MB3 LINE L1 -83 6100 5788 5 1046 1439 220 129 6 chrX 60540504 60540838 -106109458 - ORR1C2 LTR MaLR -7 377 3 5 1046 523 240 251 0 chrX 60540908 60541083 -106109213 - URR1B DNA MER1_type -5 220 2 5 1046 1025 226 5 10 chrX 60541274 60541475 -106108821 - MTC LTR MaLR -1 420 221 5 1046 2327 86 32 12 chrX 60541475 60541816 -106108480 - L1Md_F2 LINE L1 -2 6580 6233 6 1046 2731 70 6 0 chrX 60541816 60542171 -106108125 + L1Md_F2 LINE L1 5613 5969 -613 6 1046 2204 59 3 0 chrX 60542170 60542456 -106107840 - L1Md_F2 LINE L1 -498 6086 5800 6 1046 10227 65 9 1 chrX 60542455 60543830 -106106466 + L1_Mm LINE L1 2720 4105 -1778 6 1046 798 176 140 14 chrX 60544941 60545148 -106105148 - RMER1A Other Other -13 1017 785 6 1046 821 277 13 156 chrX 60545142 60545532 -106104764 + RMER1A Other Other 77 410 -620 6 1046 531 45 0 0 chrX 60545545 60545611 -106104685 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 1046 522 104 9 54 chrX 60545617 60545729 -106104567 - L1_Mus4 LINE L1 0 6636 6530 6 1046 2352 188 92 17 chrX 60545808 60546350 -106103946 + Lx4B LINE L1 6475 7057 -1 6 1046 753 142 0 0 chrX 60546442 60546569 -106103727 + (CATA)n Simple_repeat Simple_repeat 2 128 0 6 1046 276 319 57 89 chrX 60548324 60548448 -106101848 + PB1D7 SINE Alu 1 120 0 6 1046 272 346 60 23 chrX 60548833 60548966 -106101330 + B1F1 SINE Alu 3 140 -9 7 1046 248 333 0 42 chrX 60548978 60549050 -106101246 + ID4 SINE ID 1 69 -14 7 1046 1386 227 57 54 chrX 60549173 60549545 -106100751 - ORR1D1 LTR MaLR 0 374 2 7 1046 429 286 34 60 chrX 60549552 60549701 -106100595 + B1_Mur2 SINE Alu 4 148 -1 7 1046 329 155 145 66 chrX 60549702 60549778 -106100518 - MTD LTR MaLR -138 281 200 7 1046 522 0 0 0 chrX 60549778 60549836 -106100460 + (TTTTA)n Simple_repeat Simple_repeat 3 60 0 7 1046 1014 179 56 5 chrX 60549836 60550033 -106100263 - Lx2 LINE L1 -26 6971 6765 7 1046 4142 151 14 3 chrX 60550022 60550712 -106099584 - Lx2 LINE L1 -352 6645 5948 7 1046 779 268 113 0 chrX 60550763 60550994 -106099302 - MTD LTR MaLR -157 262 6 7 1046 254 29 0 28 chrX 60551038 60551074 -106099222 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1046 878 172 0 0 chrX 60551077 60551211 -106099085 - B1_Mus1 SINE Alu -14 134 1 7 1046 213 224 57 16 chrX 60551217 60551296 -106099000 - MIRc SINE MIR -88 174 92 8 1046 1407 164 0 4 chrX 60551339 60551565 -106098731 - URR1B DNA MER1_type 0 225 1 8 1046 35 0 0 0 chrX 60551924 60551959 -106098337 + AT_rich Low_complexity Low_complexity 1 35 0 8 1046 275 379 7 85 chrX 60552263 60552416 -106097880 - B4A SINE B4 -60 232 92 8 1046 298 39 59 0 chrX 60553326 60553377 -106096919 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 8 1046 26 0 0 0 chrX 60554463 60554489 -106095807 + AT_rich Low_complexity Low_complexity 1 26 0 8 1046 268 349 39 26 chrX 60554744 60554900 -106095396 - MLT1D LTR MaLR -2 503 346 8 1047 3130 232 97 9 chrX 60555901 60556763 -106093533 + Lx9 LINE L1 6708 7644 0 8 1047 23 54 0 0 chrX 60556923 60556960 -106093336 + AT_rich Low_complexity Low_complexity 1 37 0 8 1047 3508 55 0 0 chrX 60557002 60557437 -106092859 + L1Md_F3 LINE L1 5151 5585 -298 8 1047 7994 35 20 0 chrX 60557438 60558402 -106091894 + L1Md_F3 LINE L1 5587 6569 -15 8 1047 383 53 0 34 chrX 60558703 60558762 -106091534 + (TTTA)n Simple_repeat Simple_repeat 2 58 0 9 1047 1090 82 0 0 chrX 60558764 60558910 -106091386 - B1_Mm SINE Alu -1 146 1 9 1047 202 150 25 0 chrX 60559079 60559119 -106091177 + (TA)n Simple_repeat Simple_repeat 1 41 0 9 1047 40 0 0 0 chrX 60559188 60559228 -106091068 + AT_rich Low_complexity Low_complexity 1 40 0 9 1047 4545 184 32 5 chrX 60559385 60560320 -106089976 + Lx4A LINE L1 375 1231 -5855 9 1047 2759 71 11 0 chrX 60560322 60560701 -106089595 - RLTR10 LTR ERVK -2 388 6 9 1047 18522 149 156 11 chrX 60560705 60561057 -106089239 + Lx4A LINE L1 1239 1591 -4286 9 1047 1019 110 14 0 chrX 60561057 60561202 -106089094 + B1_Mm SINE Alu 1 147 0 9 1047 18522 149 156 11 chrX 60561202 60561648 -106088648 + Lx4A LINE L1 1592 2525 -3352 9 1047 2918 18 0 0 chrX 60561648 60561984 -106088312 - L1Md_A LINE L1 0 6582 6247 9 1047 4467 51 0 4 chrX 60561986 60562538 -106087758 + L1Md_F2 LINE L1 6021 6570 -12 9 1047 18522 152 142 11 chrX 60562538 60566216 -106084080 + Lx4A LINE L1 2526 6315 -743 9 1047 1772 120 79 13 chrX 60566217 60566520 -106083776 + IAPEY2_LTR LTR ERVK 35 357 0 9 1047 2717 165 53 0 chrX 60566520 60566987 -106083309 + Lx4A LINE L1 6302 6793 -265 9 1047 1411 73 11 0 chrX 60567554 60567745 -106082551 - B2_Mm1t SINE B2 0 193 1 1 1047 928 147 24 18 chrX 60568164 60568330 -106081966 - B2_Mm2 SINE B2 -4 191 25 1 1047 242 225 9 0 chrX 60568450 60568512 -106081784 - B3 SINE B2 -131 64 1 1 1047 21251 141 7 58 chrX 60568602 60570947 -106079349 - L1Md_F2 LINE L1 -2 6580 4244 1 1047 2055 32 0 0 chrX 60570947 60571194 -106079102 - L1Md_F3 LINE L1 -13 6571 6325 1 1047 21639 103 3 21 chrX 60571194 60575331 -106074965 - L1Md_F2 LINE L1 -1643 4243 621 1 1047 357 145 0 0 chrX 60575341 60575403 -106074893 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 1 1047 6892 142 22 21 chrX 60575403 60576500 -106073796 - Lx3A LINE L1 -2 6979 5878 1 1047 2948 150 24 28 chrX 60576500 60577035 -106073261 + RMER16 LTR ERVK 1 533 0 1 1047 6892 142 22 21 chrX 60577035 60577174 -106073122 - Lx3A LINE L1 -1104 5877 5742 1 1047 1021 232 27 4 chrX 60578159 60578384 -106071912 - Lx6 LINE L1 -185 7275 7046 1 1047 985 326 51 30 chrX 60578441 60578811 -106071485 + MT2A LTR ERVL 79 456 -77 1 1047 218 253 12 0 chrX 60578815 60578898 -106071398 + (CA)n Simple_repeat Simple_repeat 2 85 0 1 1047 216 122 0 0 chrX 60578922 60578963 -106071333 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1047 24 77 0 0 chrX 60579038 60579090 -106071206 + AT_rich Low_complexity Low_complexity 1 52 0 1 1047 227 191 15 0 chrX 60579393 60579461 -106070835 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 1047 32 57 0 0 chrX 60579697 60579750 -106070546 + AT_rich Low_complexity Low_complexity 1 53 0 1 1047 3242 51 2 5 chrX 60580063 60580460 -106069836 - MTA_Mm LTR MaLR 0 396 1 1 1047 249 353 14 14 chrX 60580850 60580919 -106069377 + tRNA-Ala-GCG tRNA tRNA 2 70 -5 1 1047 314 38 48 60 chrX 60580997 60581081 -106069215 + (TTTTTG)n Simple_repeat Simple_repeat 3 85 0 1 1047 957 132 14 0 chrX 60581082 60581226 -106069070 - B1_Mus2 SINE Alu 0 147 2 1 1047 21 36 0 0 chrX 60581808 60581836 -106068460 + AT_rich Low_complexity Low_complexity 1 28 0 1 1047 23 0 0 0 chrX 60582047 60582070 -106068226 + AT_rich Low_complexity Low_complexity 1 23 0 1 1047 3521 112 62 2 chrX 60582102 60582632 -106067664 + Lx LINE L1 6080 6641 -13 1 1047 898 153 14 7 chrX 60582749 60582888 -106067408 + B1_Mur4 SINE Alu 3 143 -7 1 1047 434 41 55 0 chrX 60582888 60582961 -106067335 + (CATA)n Simple_repeat Simple_repeat 4 80 0 1 1047 240 274 9 36 chrX 60583066 60583176 -106067120 - BC1_Mm scRNA scRNA -21 131 25 1 1047 226 192 74 37 chrX 60583564 60583618 -106066678 + B2_Mm2 SINE B2 2 57 -138 1 1047 35 88 0 0 chrX 60583706 60583797 -106066499 + AT_rich Low_complexity Low_complexity 1 91 0 1 1047 24 77 0 0 chrX 60584193 60584245 -106066051 + AT_rich Low_complexity Low_complexity 1 52 0 1 1047 318 333 29 43 chrX 60584370 60584580 -106065716 + Lx9 LINE L1 7267 7473 -171 1 1047 368 327 84 60 chrX 60586054 60586435 -106063861 + MLT1B LTR MaLR 1 390 0 1 1047 7184 113 12 1 chrX 60586674 60587937 -106062359 + L1_Mus4 LINE L1 5352 6628 -8 1 1047 342 0 0 0 chrX 60587941 60587979 -106062317 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1047 188 204 0 36 chrX 60588020 60588076 -106062220 + A-rich Low_complexity Low_complexity 2 55 0 1 1047 29 0 0 0 chrX 60588247 60588276 -106062020 + AT_rich Low_complexity Low_complexity 1 29 0 1 1047 427 345 41 112 chrX 60588358 60588554 -106061742 + B3A SINE B2 1 182 -16 1 1047 261 0 0 0 chrX 60589179 60589208 -106061088 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1047 348 355 52 16 chrX 60590117 60590369 -106059927 - L1M2 LINE L1 -1869 4274 4014 1 1047 5954 37 4 4 chrX 60590369 60591095 -106059201 - L1Md_F3 LINE L1 -14 6570 5845 1 1047 5762 51 0 0 chrX 60591095 60591800 -106058496 + L1Md_F3 LINE L1 5131 5835 -48 1 1047 963 208 92 51 chrX 60591854 60592168 -106058128 - Lx7 LINE L1 -1 7695 7369 1 1047 2611 289 42 56 chrX 60592208 60592682 -106057614 - Lx7 LINE L1 -1077 6619 6155 1 1047 3773 112 45 13 chrX 60592682 60593280 -106057016 - Lx LINE L1 -7 6647 6031 1 1047 2611 289 42 56 chrX 60593280 60593833 -106056463 - Lx7 LINE L1 -1542 6154 5607 1 1047 667 260 10 91 chrX 60593835 60594034 -106056262 + ORR1D1 LTR MaLR 2 184 -190 1 1047 1490 303 102 9 chrX 60594042 60594726 -106055570 - Lx8 LINE L1 -318 7155 6408 1 1047 405 319 71 38 chrX 60595319 60595684 -106054612 + Lx9 LINE L1 7248 7624 -20 1 1047 382 390 112 0 chrX 60596344 60596549 -106053747 + MLT1A LTR MaLR 30 257 -117 1 1047 2108 241 38 2 chrX 60596565 60597015 -106053281 - Lx6 LINE L1 -4 7456 6991 1 1047 292 247 105 12 chrX 60597015 60597101 -106053195 + MLT1A LTR MaLR 281 374 0 1 1047 216 0 0 0 chrX 60597463 60597487 -106052809 + (TTTTG)n Simple_repeat Simple_repeat 5 28 0 1 1047 363 60 0 0 chrX 60597562 60597612 -106052684 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1047 23 33 0 0 chrX 60598114 60598144 -106052152 + AT_rich Low_complexity Low_complexity 1 30 0 1 1047 309 326 0 11 chrX 60598408 60598484 -106051812 - B4A SINE B4 -16 276 202 1 1047 347 281 72 29 chrX 60598484 60598623 -106051673 - RLTR41 LTR ERV1 0 446 302 1 1047 317 398 36 31 chrX 60598858 60599067 -106051229 - B4A SINE B4 -26 266 58 1 1047 3499 186 31 9 chrX 60599095 60599782 -106050514 - Lx4B LINE L1 -16 7042 6341 1 1047 4494 144 19 8 chrX 60599782 60600563 -106049733 - L1_Mur2 LINE L1 -762 5115 4326 1 1047 1182 211 11 135 chrX 60600574 60600992 -106049304 + RMER16 LTR ERVK 3 533 0 1 1047 8509 185 19 24 chrX 60601000 60602830 -106047466 - L1_Mur2 LINE L1 -1564 4313 2494 1 1047 2660 242 25 7 chrX 60602835 60603591 -106046705 - L1_Mur2 LINE L1 -3787 2099 1330 1 1047 421 319 7 0 chrX 60603591 60603729 -106046567 + ERVL-B4-int LTR ERVL 2169 2307 -3407 1 1047 362 326 27 20 chrX 60603998 60604145 -106046151 + ERVL-B4-int LTR ERVL 4519 4666 -1048 1 1047 349 314 62 47 chrX 60604673 60604884 -106045412 + B3 SINE B2 3 216 0 1 1047 23 0 0 0 chrX 60605020 60605043 -106045253 + AT_rich Low_complexity Low_complexity 1 23 0 1 1047 198 0 0 0 chrX 60605995 60606017 -106044279 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 1 1047 431 344 16 67 chrX 60607451 60607644 -106042652 + B3A SINE B2 9 191 -7 1 1047 423 0 0 0 chrX 60608177 60608224 -106042072 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 1047 581 149 83 9 chrX 60608270 60608376 -106041920 + RMER6B LTR ERVK 1 114 -347 1 1047 828 168 77 0 chrX 60608376 60608531 -106041765 + RMER6B LTR ERVK 3 169 -292 1 1047 342 328 59 56 chrX 60609755 60610042 -106040254 + Charlie2b DNA MER1_type 33 320 -2462 1 1047 368 310 71 79 chrX 60610167 60610440 -106039856 + Charlie2b DNA MER1_type 1942 2226 -556 1 1047 974 83 38 0 chrX 60610440 60610573 -106039723 + B1_Mus2 SINE Alu 1 138 -9 1 1047 219 69 0 0 chrX 60610573 60610602 -106039694 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 1047 368 310 71 79 chrX 60610602 60611083 -106039213 + Charlie2b DNA MER1_type 2227 2690 -92 1 1047 37 52 0 0 chrX 60611120 60611178 -106039118 + AT_rich Low_complexity Low_complexity 1 58 0 1 1047 456 195 0 26 chrX 60612665 60612781 -106037515 - L1_Mur3 LINE L1 -2458 3422 3310 1 1047 1202 267 77 22 chrX 60612783 60613147 -106037149 - RMER1C Other Other -8 1334 951 1 1047 261 226 0 0 chrX 60613153 60613206 -106037090 - L1_Mur3 LINE L1 -2546 3334 3282 1 1047 2937 202 32 11 chrX 60613205 60613315 -106036981 + Lx6 LINE L1 5079 5188 -692 1 1047 339 25 0 0 chrX 60613315 60613355 -106036941 + (TTTTA)n Simple_repeat Simple_repeat 3 42 0 1 1047 6076 244 52 40 chrX 60613355 60615577 -106034719 + Lx6 LINE L1 5189 7451 -9 1 1047 1657 199 17 82 chrX 60615789 60616193 -106034103 - RLTR1B LTR ERV1 0 512 135 1 1047 3222 108 65 21 chrX 60616280 60616929 -106033367 - RLTR1B-int LTR ERV1 0 3299 2692 1 1047 8140 90 70 74 chrX 60616927 60618421 -106031875 - RLTR1B-int LTR ERV1 -1638 3425 1135 1 1047 606 28 0 0 chrX 60618421 60618493 -106031803 + (TC)n Simple_repeat Simple_repeat 1 72 0 1 1047 8140 94 89 93 chrX 60618493 60618615 -106031681 - RLTR1B-int LTR ERV1 -2165 1134 950 1 1047 216 0 0 0 chrX 60618626 60618650 -106031646 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 1 1047 937 50 0 0 chrX 60618660 60618779 -106031517 - B1_Mm SINE Alu -1 146 28 1 1047 1783 166 45 31 chrX 60618805 60619159 -106031137 - RLTR1B-int LTR ERV1 -2182 1516 1158 1 1047 278 269 32 90 chrX 60619323 60619511 -106030785 - RLTR1B-int LTR ERV1 -2509 790 614 1 1047 1136 169 80 136 chrX 60619815 60620314 -106029982 - RLTR1B-int LTR ERV1 -2828 471 1 1 1047 1578 213 17 82 chrX 60620314 60620718 -106029578 - RLTR1B LTR ERV1 0 512 135 1 1047 225 132 0 0 chrX 60621399 60621437 -106028859 + (A)n Simple_repeat Simple_repeat 1 38 0 1 1047 860 230 109 5 chrX 60621606 60621807 -106028489 + MTC LTR MaLR 1 222 -199 1 1047 258 156 0 0 chrX 60621807 60621852 -106028444 + L1_Mm LINE L1 5413 5457 -426 1 1047 401 73 0 0 chrX 60621855 60621910 -106028386 + Lx LINE L1 6258 6312 -342 1 1047 1945 165 68 8 chrX 60621912 60622266 -106028030 - RLTR9D LTR ERVK -12 391 17 1 1047 2047 131 37 23 chrX 60622266 60622617 -106027679 + Lx LINE L1 6288 6643 -11 1 1047 22 0 0 0 chrX 60622623 60622645 -106027651 + AT_rich Low_complexity Low_complexity 1 22 0 1 1047 2375 106 9 120 chrX 60622645 60623095 -106027201 + L1_Mm LINE L1 5445 5844 -39 1 1047 401 242 0 0 chrX 60623088 60623187 -106027109 + Lx5 LINE L1 5553 5651 -226 1 1047 3001 165 13 9 chrX 60623188 60623715 -106026581 + Lx2B LINE L1 6472 7000 0 1 1047 348 147 0 93 chrX 60623834 60623909 -106026387 + URR1B DNA MER1_type 158 225 0 1 1047 270 116 0 0 chrX 60624295 60624338 -106025958 + (TAGA)n Simple_repeat Simple_repeat 1 43 0 1 1047 366 289 31 0 chrX 60624345 60624473 -106025823 - Lx9 LINE L1 -146 7498 7367 1 1047 467 269 21 0 chrX 60624465 60624606 -106025690 + Lx9 LINE L1 7204 7347 -297 1 1047 234 0 0 0 chrX 60624671 60624697 -106025599 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1047 387 0 0 0 chrX 60624699 60624742 -106025554 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1047 17588 66 0 0 chrX 60625045 60627363 -106022933 - L1_Mm LINE L1 -608 5275 2958 1 1047 1484 188 133 15 chrX 60628607 60628931 -106021365 - Lx5 LINE L1 -50 7000 6639 1 1047 1173 157 0 14 chrX 60628925 60629138 -106021158 + Lx5 LINE L1 5836 6045 -1005 1 1047 3595 203 25 26 chrX 60629137 60630413 -106019883 - L1_Mur2 LINE L1 -3721 2156 882 1 1047 266 306 85 46 chrX 60630689 60630819 -106019477 + Tigger5 DNA MER2_type 97 231 -2175 1 1047 1053 117 0 0 chrX 60631194 60631339 -106018957 + B1_Mus2 SINE Alu 1 145 -2 1 1047 261 251 103 51 chrX 60632195 60632409 -106017887 + L1MA6 LINE L1 6075 6299 -1 1 1047 515 132 11 0 chrX 60632443 60632534 -106017762 + (TA)n Simple_repeat Simple_repeat 2 93 0 1 1047 25 0 0 0 chrX 60632973 60632998 -106017298 + AT_rich Low_complexity Low_complexity 1 25 0 1 1047 430 266 73 42 chrX 60633550 60633742 -106016554 + B3A SINE B2 1 198 0 1 1047 318 115 0 0 chrX 60634325 60634377 -106015919 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1047 211 77 0 88 chrX 60634688 60634745 -106015551 + T-rich Low_complexity Low_complexity 2 53 0 1 1047 296 281 222 11 chrX 60635194 60635412 -106014884 - L1MA5 LINE L1 -215 6076 5811 1 1047 834 221 0 6 chrX 60635477 60635636 -106014660 - MTC LTR MaLR -29 392 235 2 1047 288 0 0 0 chrX 60635648 60635680 -106014616 + (TC)n Simple_repeat Simple_repeat 2 33 0 2 1047 483 18 0 0 chrX 60635680 60635735 -106014561 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 1047 198 0 0 0 chrX 60635735 60635756 -106014540 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 1047 3455 134 0 53 chrX 60635893 60636492 -106013804 - Lx LINE L1 -3 6651 6085 2 1047 2082 160 57 3 chrX 60636494 60636883 -106013413 + Lx2 LINE L1 6017 6426 -571 2 1047 991 260 15 8 chrX 60636941 60637201 -106013095 - Lx6 LINE L1 -16 7444 7183 2 1047 392 272 60 5 chrX 60637242 60637447 -106012849 - L1MA5 LINE L1 -843 5448 5231 1 1047 22 56 0 0 chrX 60637694 60637730 -106012566 + AT_rich Low_complexity Low_complexity 1 36 0 2 1047 250 361 48 48 chrX 60637778 60638005 -106012291 - Lx8 LINE L1 -121 7352 7126 2 1047 233 299 143 20 chrX 60638355 60638502 -106011794 - MIRb SINE MIR -75 193 29 2 1047 29 0 0 0 chrX 60638617 60638646 -106011650 + AT_rich Low_complexity Low_complexity 1 29 0 2 1047 233 155 17 0 chrX 60639813 60639871 -106010425 + GA-rich Low_complexity Low_complexity 1 59 0 2 1047 275 365 9 9 chrX 60639896 60640004 -106010292 + Lx8 LINE L1 6197 6304 -1169 2 1047 5542 113 12 12 chrX 60640053 60641200 -106009096 + Lx3_Mus LINE L1 5083 6239 -770 2 1047 5181 62 6 1 chrX 60641244 60641904 -106008392 - L1Md_F2 LINE L1 -3 6579 5917 2 1047 25 0 0 0 chrX 60642150 60642175 -106008121 + AT_rich Low_complexity Low_complexity 1 25 0 2 1047 210 349 113 7 chrX 60642955 60643105 -106007191 - MIRb SINE MIR -25 243 78 2 1047 22 70 0 0 chrX 60644760 60644803 -106005493 + AT_rich Low_complexity Low_complexity 1 43 0 2 1047 348 336 16 0 chrX 60644896 60645021 -106005275 + MIR3 SINE MIR 74 200 -8 2 1047 383 399 89 24 chrX 60645414 60645995 -106004301 - Lx8 LINE L1 -2 7471 6853 2 1047 230 261 62 0 chrX 60645994 60646059 -106004237 - L1_Rod LINE L1 -6710 898 830 2 1047 4214 233 97 34 chrX 60646061 60647423 -106002873 + L1_Rod LINE L1 1023 2458 -3389 2 1047 573 129 0 0 chrX 60647423 60647516 -106002780 + (TA)n Simple_repeat Simple_repeat 1 93 0 2 1047 4214 237 106 41 chrX 60647516 60647781 -106002515 + L1_Rod LINE L1 2459 2738 -3109 2 1047 3503 26 5 9 chrX 60647781 60648205 -106002091 + L1Md_F3 LINE L1 6163 6584 0 2 1047 4214 237 106 41 chrX 60648205 60648362 -106001934 + L1_Rod LINE L1 2739 2934 -2913 2 1047 1031 111 0 0 chrX 60648362 60648506 -106001790 + B1_Mus1 SINE Alu 1 144 -4 2 1047 198 0 0 0 chrX 60648507 60648529 -106001767 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 2 1047 4214 237 106 41 chrX 60648529 60648644 -106001652 + L1_Rod LINE L1 2935 3045 -2802 2 1047 234 0 0 0 chrX 60648806 60648832 -106001464 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 1047 1019 67 45 0 chrX 60648833 60648967 -106001329 - B1_Mus2 SINE Alu -6 141 2 2 1047 6638 124 19 5 chrX 60648967 60650202 -106000094 - L1_Mus3 LINE L1 0 6638 5407 2 1047 5896 181 26 7 chrX 60650163 60651317 -105998979 + L1_Mm LINE L1 4383 5558 -325 2 1047 2196 154 13 3 chrX 60651317 60651689 -105998607 + L1_Mus4 LINE L1 6253 6628 -8 2 1047 306 0 0 0 chrX 60651753 60651787 -105998509 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2 1047 502 204 0 0 chrX 60651794 60651892 -105998404 + L1_Mur2 LINE L1 5008 5105 -772 2 1047 4349 181 49 19 chrX 60651895 60652186 -105998110 + Lx4A LINE L1 6159 6455 -603 2 1047 3693 51 14 58 chrX 60652186 60652702 -105997594 + MT2_Mm LTR ERVL 1 493 0 2 1047 4349 181 49 19 chrX 60652702 60653280 -105997016 + Lx4A LINE L1 6456 7054 -4 2 1047 4764 141 4 1 chrX 60653929 60655048 -105995248 + L1_Mus4 LINE L1 5046 6168 -468 2 1047 21 0 0 0 chrX 60655048 60655069 -105995227 + AT_rich Low_complexity Low_complexity 1 21 0 2 1047 307 339 99 30 chrX 60655314 60655515 -105994781 - L1MEe LINE L1 -4635 219 5 2 1047 293 342 52 9 chrX 60655795 60655910 -105994386 + ID_B1 SINE B4 97 216 -8 2 1047 1116 245 82 16 chrX 60656301 60656604 -105993692 + Lx5 LINE L1 6728 7050 0 2 1047 206 182 0 22 chrX 60656609 60656654 -105993642 + A-rich Low_complexity Low_complexity 4 47 0 2 1047 399 125 0 0 chrX 60656984 60657056 -105993240 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 1047 1136 119 45 0 chrX 60657212 60657388 -105992908 - B2_Mm2 SINE B2 -8 187 4 2 1047 2500 180 140 28 chrX 60657390 60657932 -105992364 - RMER19C LTR ERVK -8 603 1 2 1047 381 22 0 0 chrX 60657999 60658045 -105992251 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1047 292 205 25 13 chrX 60659073 60659152 -105991144 + L1M2 LINE L1 4404 4483 -1660 2 1047 22 35 0 0 chrX 60659192 60659221 -105991075 + AT_rich Low_complexity Low_complexity 1 29 0 2 1047 33 0 0 0 chrX 60659388 60659421 -105990875 + AT_rich Low_complexity Low_complexity 1 33 0 2 1047 1835 261 44 37 chrX 60659425 60660148 -105990148 + L1_Mur3 LINE L1 2328 3055 -2825 2 1047 895 76 43 22 chrX 60660157 60660300 -105989996 + B1_Mm SINE Alu 1 142 -5 2 1047 270 0 0 0 chrX 60660304 60660334 -105989962 + (TAA)n Simple_repeat Simple_repeat 3 32 0 2 1047 835 275 31 3 chrX 60660377 60660669 -105989627 + L1_Mur3 LINE L1 3288 3587 -2293 2 1047 4242 32 2 0 chrX 60660669 60661170 -105989126 - L1Md_T LINE L1 0 6582 6081 2 1047 4113 23 0 0 chrX 60661170 60661825 -105988471 + L1Md_T LINE L1 5423 6077 -505 2 1047 341 248 2 113 chrX 60661811 60661909 -105988387 + L1_Mur3 LINE L1 3609 3698 -2448 2 1047 1028 114 6 0 chrX 60661909 60662076 -105988220 + (GAAA)n Simple_repeat Simple_repeat 2 169 0 2 1047 341 230 0 119 chrX 60662076 60662162 -105988134 + L1_Mur3 LINE L1 3659 3741 -2139 2 1047 477 0 0 0 chrX 60662163 60662216 -105988080 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 1047 1032 132 76 28 chrX 60662216 60662427 -105987869 - L1_Mur2 LINE L1 -1975 3902 3682 2 1047 2314 186 40 0 chrX 60662419 60662875 -105987421 - L1_Mm LINE L1 -311 5572 5099 2 1047 9864 133 53 5 chrX 60662871 60665438 -105984858 - L1_Mus3 LINE L1 0 6638 3929 2 1047 296 242 0 0 chrX 60665437 60665503 -105984793 - L1VL2 LINE L1 -6191 144 79 2 1047 782 226 8 8 chrX 60665510 60665720 -105984576 - L1_Mur2 LINE L1 -5993 1093 883 2 1047 985 186 87 0 chrX 60666705 60666947 -105983349 + L1_Mur3 LINE L1 3927 4189 -1691 2 1047 356 256 37 0 chrX 60667084 60667166 -105983130 + RMER5 LTR ERV1 382 466 -68 2 1047 256 265 10 10 chrX 60667220 60667323 -105982973 + L1M3 LINE L1 4528 4630 -1510 2 1047 506 341 38 19 chrX 60667941 60668150 -105982146 - MTD LTR MaLR -206 213 1 2 1047 348 244 0 0 chrX 60669868 60669958 -105980338 + (TAGA)n Simple_repeat Simple_repeat 4 93 0 2 1047 406 364 17 88 chrX 60669976 60670157 -105980139 + B3A SINE B2 1 168 -30 2 1047 3662 184 34 7 chrX 60670569 60671243 -105979053 + RLTR17 LTR ERVK 1 692 0 2 1047 1205 55 0 0 chrX 60671313 60671459 -105978837 - B1_Mus1 SINE Alu -1 147 2 2 1047 21 0 0 0 chrX 60671560 60671581 -105978715 + AT_rich Low_complexity Low_complexity 1 21 0 2 1047 1292 107 5 0 chrX 60672985 60673172 -105977124 - B2_Mm2 SINE B2 -7 188 1 2 1047 718 134 0 0 chrX 60673718 60673830 -105976466 - L1_Mus4 LINE L1 -310 6326 6215 2 1047 1705 141 11 0 chrX 60673830 60674107 -105976189 + L1_Mus4 LINE L1 6350 6629 -7 2 1047 4431 36 0 0 chrX 60674239 60674763 -105975533 + L1Md_T LINE L1 6059 6582 0 2 1047 9383 68 4 2 chrX 60674763 60676689 -105973607 - L1Md_F2 LINE L1 -17 6565 4637 2 1047 1122 289 19 35 chrX 60677148 60677179 -105973117 - Lx6 LINE L1 0 7460 7434 2 1047 2630 175 17 8 chrX 60677179 60677652 -105972644 - Lx2A1 LINE L1 -6 7002 6526 2 1047 1122 289 19 35 chrX 60677652 60677997 -105972299 - Lx6 LINE L1 -27 7433 7090 2 1047 419 321 12 12 chrX 60678002 60678163 -105972133 + Lx6 LINE L1 6681 6841 -619 2 1047 223 233 16 16 chrX 60679569 60679630 -105970666 + (CATA)n Simple_repeat Simple_repeat 4 64 0 2 1047 325 382 32 11 chrX 60679805 60679990 -105970306 + MER5A DNA MER1_type 1 189 0 2 1047 454 333 85 89 chrX 60679992 60680308 -105969988 + ORR1E LTR MaLR 1 315 -44 2 1047 21 0 0 0 chrX 60680342 60680363 -105969933 + AT_rich Low_complexity Low_complexity 1 21 0 2 1047 16821 182 30 7 chrX 60680893 60682917 -105967379 + L1VL4 LINE L1 856 2899 -2987 2 1047 3696 0 0 0 chrX 60682917 60683326 -105966970 + L1Md_T LINE L1 6174 6582 0 2 1047 16821 182 29 7 chrX 60683326 60685028 -105965268 + L1VL4 LINE L1 2900 4631 -1255 2 1047 203 0 0 36 chrX 60685028 60685056 -105965240 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 2 1047 16821 182 29 7 chrX 60685056 60685193 -105965103 + L1VL4 LINE L1 4632 4798 -1088 2 1047 501 239 118 41 chrX 60685398 60685568 -105964728 + LTRIS4 LTR ERV1 325 507 0 2 1047 502 113 0 0 chrX 60685568 60685638 -105964658 + RLTR22_Mus LTR ERVK 21 90 -1718 2 1047 355 181 0 27 chrX 60685637 60685711 -105964585 + RLTR22_Mur LTR ERVK 1770 1841 -7 2 1048 2779 91 3 8 chrX 60687509 60687898 -105962398 - MTA_Mm LTR MaLR -8 388 2 2 1048 1468 150 106 4 chrX 60688228 60688503 -105961793 + Lx LINE L1 6340 6642 -12 2 1048 234 81 0 0 chrX 60688511 60688548 -105961748 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 2 1048 5300 98 20 6 chrX 60690451 60691251 -105959045 + RLTR22_Mus LTR ERVK 1 811 -997 2 1048 1321 161 66 4 chrX 60691481 60691724 -105958572 + RLTR22_Mur LTR ERVK 1591 1848 0 2 1048 3253 189 0 5 chrX 60691724 60692337 -105957959 + L1_Mur2 LINE L1 4785 5394 -483 2 1048 3443 135 5 72 chrX 60692337 60693007 -105957289 + Lx2A LINE L1 6383 7007 -1 2 1048 896 298 25 13 chrX 60693143 60693381 -105956915 + ORR1D2 LTR MaLR 8 248 -122 2 1048 2111 186 91 5 chrX 60693373 60694031 -105956265 - RMER13B LTR ERVK -15 893 179 2 1048 1547 294 64 77 chrX 60694043 60694971 -105955325 - RMER17B LTR ERVK -42 916 1 2 1048 971 185 53 0 chrX 60694971 60695151 -105955145 - RMER13B LTR ERVK -718 190 1 2 1048 1324 233 43 75 chrX 60695235 60695610 -105954686 + RLTR40 LTR ERVK 455 817 0 2 1048 1730 128 45 79 chrX 60696405 60696735 -105953561 + ORR1A2 LTR MaLR 1 319 -8 2 1048 7954 40 17 1 chrX 60697256 60698613 -105951683 + L1Md_F3 LINE L1 5138 6496 -88 2 1048 183 42 0 0 chrX 60698613 60698637 -105951659 + (TGGGGG)n Simple_repeat Simple_repeat 6 29 0 2 1048 7954 29 25 0 chrX 60698637 60698683 -105951613 + L1Md_F3 LINE L1 6497 6561 -23 2 1048 613 334 96 11 chrX 60699347 60699701 -105950595 + Lx9 LINE L1 6619 7002 -642 2 1048 1145 80 6 6 chrX 60700060 60700223 -105950073 - L1_Mus1 LINE L1 -577 5990 5828 2 1048 38310 7 0 7 chrX 60700223 60705438 -105944858 + L1Md_A LINE L1 413 5586 -297 2 1048 8845 10 1 0 chrX 60705438 60706433 -105943863 + L1Md_A LINE L1 5587 6582 0 2 1048 1055 74 0 0 chrX 60706470 60706605 -105943691 - L1_Mus1 LINE L1 -726 5841 5707 2 1048 3958 83 9 0 chrX 60706605 60707138 -105943158 + L1_Mus1 LINE L1 6029 6566 -1 2 1048 229 327 87 29 chrX 60707538 60707642 -105942654 + ID_B1 SINE B4 91 200 -24 3 1048 208 238 0 0 chrX 60707661 60707703 -105942593 + (CATA)n Simple_repeat Simple_repeat 3 44 0 3 1048 2052 146 2 11 chrX 60707781 60708139 -105942157 - L1ME3A LINE L1 -315 5858 5475 3 1048 4051 152 12 4 chrX 60708156 60708839 -105941457 + L1_Mus3 LINE L1 5951 6638 0 3 1048 464 117 13 0 chrX 60708965 60709042 -105941254 + (TA)n Simple_repeat Simple_repeat 2 79 0 3 1048 980 353 47 15 chrX 60710503 60711074 -105939222 - Lx7 LINE L1 -594 7102 6524 3 1048 3816 125 29 3 chrX 60711095 60711719 -105938577 - L1_Mus3 LINE L1 -1 6637 5998 3 1048 1509 11 5 16 chrX 60711727 60711915 -105938381 - L1Md_A LINE L1 0 6582 6397 3 1048 15702 168 41 13 chrX 60711918 60714564 -105935732 - L1_Mus3 LINE L1 -677 5961 3264 3 1048 270 0 0 0 chrX 60714564 60714594 -105935702 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 1048 15702 183 48 15 chrX 60714594 60714723 -105935573 - L1_Mus3 LINE L1 -2623 3263 3110 3 1048 288 0 0 0 chrX 60714723 60714755 -105935541 + (TTTTA)n Simple_repeat Simple_repeat 3 34 0 3 1048 15702 183 48 15 chrX 60714755 60715462 -105934834 - L1_Mus3 LINE L1 -2777 3109 2372 3 1048 234 275 166 28 chrX 60715661 60715945 -105934351 + L1ME3 LINE L1 5081 5403 -743 3 1048 4962 180 95 12 chrX 60716007 60717025 -105933271 + RLTR25A LTR ERVK 1 1103 0 3 1048 439 319 83 79 chrX 60717025 60717457 -105932839 + L1ME3 LINE L1 5515 5948 -411 3 1048 1590 186 3 11 chrX 60717495 60717777 -105932519 + Lx5 LINE L1 6315 6594 -456 3 1048 645 274 56 60 chrX 60717769 60718018 -105932278 + Lx5 LINE L1 6791 7038 -12 3 1048 720 186 17 0 chrX 60718019 60718196 -105932100 + GA-rich Low_complexity Low_complexity 1 180 0 3 1048 976 132 6 11 chrX 60718202 60718378 -105931918 + (GGAA)n Simple_repeat Simple_repeat 4 178 0 3 1048 2838 196 152 90 chrX 60718383 60719203 -105931093 + RMER19B LTR ERVK 1 871 -31 3 1048 3563 172 40 3 chrX 60719289 60719960 -105930336 + RLTR22_Mur LTR ERVK 1 696 -1152 3 1048 5315 43 3 1 chrX 60719972 60720623 -105929673 - L1Md_F2 LINE L1 -13 6569 5918 3 1048 4544 48 0 7 chrX 60720623 60721186 -105929110 + L1Md_F2 LINE L1 5325 5883 0 3 1048 497 154 110 7 chrX 60721202 60721316 -105928980 + RLTR22_Mur LTR ERVK 687 812 -996 3 1048 5372 150 33 23 chrX 60721316 60722287 -105928009 - Lx2 LINE L1 0 6997 6017 3 1048 446 190 73 93 chrX 60722287 60722323 -105927973 + RLTR22_Mur LTR ERVK 813 841 -967 3 1048 1964 183 0 0 chrX 60722323 60722632 -105927664 + L1_Mm LINE L1 5461 5805 -78 3 1048 557 298 43 74 chrX 60722643 60722900 -105927396 + RMER12 LTR ERVK 1074 1322 0 3 1048 1412 338 88 22 chrX 60722900 60723694 -105926602 + Lx8 LINE L1 6454 7298 -175 3 1048 4844 81 3 1 chrX 60723694 60724351 -105925945 + L1Md_F2 LINE L1 5920 6577 -5 3 1048 1412 338 88 22 chrX 60724351 60724472 -105925824 + Lx8 LINE L1 7299 7430 -43 3 1048 504 357 29 0 chrX 60724576 60724716 -105925580 + RSINE1 SINE B4 22 165 0 3 1048 12778 12 0 0 chrX 60725155 60726616 -105923680 + L1Md_A LINE L1 4126 5586 -297 3 1048 8750 16 0 0 chrX 60726616 60727612 -105922684 + L1Md_A LINE L1 5587 6582 0 3 1048 219 393 44 9 chrX 60727782 60727895 -105922401 - L2b LINE L2 -8 3367 3251 3 1048 2088 102 29 3 chrX 60728035 60728351 -105921945 - L1_Mus2 LINE L1 -1 6637 6314 3 1048 17455 115 6 1 chrX 60728349 60731313 -105918983 - L1_Mus2 LINE L1 -406 6160 3180 3 1048 204 290 29 20 chrX 60732406 60732508 -105917788 + CT-rich Low_complexity Low_complexity 3 105 0 3 1048 333 155 0 0 chrX 60732597 60732655 -105917641 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 1048 1151 208 72 8 chrX 60732778 60733040 -105917256 - ORR1C1 LTR MaLR 0 378 100 3 1048 288 0 0 0 chrX 60733385 60733417 -105916879 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 3 1048 809 343 34 88 chrX 60734078 60734634 -105915662 - MT2A LTR ERVL -2 531 6 3 1048 189 74 0 0 chrX 60734778 60734805 -105915491 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1048 369 313 69 53 chrX 60735124 60735313 -105914983 + B3 SINE B2 2 204 -12 3 1048 207 320 0 13 chrX 60735376 60735452 -105914844 - MIRb SINE MIR -134 134 60 3 1048 22 35 0 0 chrX 60735924 60735953 -105914343 + AT_rich Low_complexity Low_complexity 1 29 0 3 1048 500 335 71 5 chrX 60736149 60736359 -105913937 + MER58A DNA MER1_type 1 224 0 3 1048 200 79 0 50 chrX 60736630 60736670 -105913626 + (TTTTTG)n Simple_repeat Simple_repeat 6 43 0 3 1048 1074 75 7 0 chrX 60736670 60736816 -105913480 - B1_Mus1 SINE Alu 0 148 2 3 1048 356 0 23 0 chrX 60737423 60737467 -105912829 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 1048 314 230 28 83 chrX 60737499 60737608 -105912688 + Lx8 LINE L1 6967 7069 -404 3 1048 1323 197 11 34 chrX 60737608 60737871 -105912425 + MTB_Mm LTR MaLR 3 259 -148 3 1048 390 274 25 33 chrX 60737903 60738024 -105912272 - RLTR13C2 LTR ERVK 0 1023 904 3 1048 31200 107 8 11 chrX 60738031 60744206 -105906090 + L1_Mus1 LINE L1 472 6996 -1 3 1048 3856 133 90 29 chrX 60744208 60744907 -105905389 - RLTR13C2 LTR ERVK -66 742 1 3 1048 595 342 57 40 chrX 60744911 60745264 -105905032 + Lx8 LINE L1 7100 7458 -15 3 1048 1638 99 23 16 chrX 60745340 60745597 -105904699 - L1Md_F2 LINE L1 0 6582 6324 3 1048 22 35 0 0 chrX 60747033 60747062 -105903234 + AT_rich Low_complexity Low_complexity 1 29 0 3 1048 488 410 44 35 chrX 60747120 60747464 -105902832 - MLT1G3 LTR MaLR -217 378 32 3 1048 235 61 0 0 chrX 60747464 60747497 -105902799 - L1_Mus4 LINE L1 -306 6330 6298 3 1048 661 101 0 0 chrX 60747497 60747606 -105902690 + L1_Mus4 LINE L1 6525 6633 -3 3 1048 298 298 165 22 chrX 60747635 60747865 -105902431 - L2 LINE L2 -989 2430 2168 3 1048 21 0 0 0 chrX 60747939 60747960 -105902336 + AT_rich Low_complexity Low_complexity 1 21 0 3 1048 6113 54 3 8 chrX 60748711 60749566 -105900730 - L1Md_F2 LINE L1 0 6582 5803 3 1048 738 143 0 0 chrX 60749576 60749709 -105900587 + (TA)n Simple_repeat Simple_repeat 1 133 0 3 1048 1126 262 131 22 chrX 60749751 60750190 -105900106 + RMER19C LTR ERVK 85 611 0 3 1048 273 230 0 0 chrX 60750192 60750292 -105900004 + (TA)n Simple_repeat Simple_repeat 1 100 0 3 1048 314 236 36 0 chrX 60750298 60750408 -105899888 + (TAGA)n Simple_repeat Simple_repeat 1 114 0 3 1048 788 157 0 27 chrX 60750417 60750601 -105899695 + (TA)n Simple_repeat Simple_repeat 1 179 0 3 1048 312 70 0 0 chrX 60750600 60750643 -105899653 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 1048 223 288 85 44 chrX 60750736 60750872 -105899424 + MIRb SINE MIR 49 196 -72 3 1048 25 51 0 0 chrX 60750883 60750922 -105899374 + AT_rich Low_complexity Low_complexity 1 39 0 3 1048 280 279 53 69 chrX 60752282 60752413 -105897883 + MLT1D LTR MaLR 305 433 -72 3 1048 396 0 0 0 chrX 60752587 60752631 -105897665 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1048 319 281 128 65 chrX 60752868 60753266 -105897030 + L1_Mur2 LINE L1 4558 4970 -910 3 1048 6578 142 28 1 chrX 60753399 60755219 -105895077 - L1_Mus4 LINE L1 -4 6632 4757 3 1048 13705 126 17 8 chrX 60755219 60755313 -105894983 - L1VL4 LINE L1 -343 3216 3121 3 1048 360 0 0 0 chrX 60755313 60755353 -105894943 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 3 1048 279 54 0 0 chrX 60755354 60755391 -105894905 + (TTGG)n Simple_repeat Simple_repeat 4 40 0 3 1048 13705 126 17 8 chrX 60755391 60756247 -105894049 - L1VL4 LINE L1 -439 3120 2266 3 1048 270 0 0 0 chrX 60756247 60756277 -105894019 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 1048 324 0 0 0 chrX 60756279 60756315 -105893981 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1048 13705 136 15 11 chrX 60756315 60758141 -105892155 - L1VL4 LINE L1 -1294 2265 421 3 1048 493 261 39 23 chrX 60758152 60758416 -105891880 - L1Md_F LINE L1 -5788 772 512 3 1048 736 123 7 7 chrX 60758480 60758627 -105891669 + (GA)n Simple_repeat Simple_repeat 2 148 0 3 1048 372 22 0 0 chrX 60758622 60758667 -105891629 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1048 264 229 123 9 chrX 60758799 60758905 -105891391 - L1M3 LINE L1 -398 5791 5674 3 1048 1183 302 112 27 chrX 60760750 60761376 -105888920 + Lx9 LINE L1 6874 7552 -92 3 1048 198 71 0 0 chrX 60761687 60761715 -105888581 + (TAAAAA)n Simple_repeat Simple_repeat 5 32 0 3 1048 568 317 39 0 chrX 60761747 60761955 -105888341 + B3 SINE B2 1 216 0 3 1048 255 31 0 0 chrX 60762111 60762143 -105888153 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1048 38441 7 0 1 chrX 60762284 60768070 -105882226 + L1Md_A LINE L1 1 5586 -297 3 1048 9026 2 0 0 chrX 60768070 60769066 -105881230 + L1Md_A LINE L1 5587 6582 0 3 1048 22 70 0 0 chrX 60769369 60769412 -105880884 + AT_rich Low_complexity Low_complexity 1 43 0 3 1048 277 401 0 68 chrX 60770073 60770089 -105880207 + ID_B1 SINE B4 80 134 -90 3 1048 355 352 0 18 chrX 60770089 60770199 -105880097 + B1F SINE Alu 10 117 -32 3 1048 277 401 0 68 chrX 60770199 60770220 -105880076 + ID_B1 SINE B4 135 216 -8 3 1048 23 0 0 0 chrX 60770464 60770487 -105879809 + AT_rich Low_complexity Low_complexity 1 23 0 3 1048 3211 97 17 2 chrX 60770487 60770953 -105879343 - Lx3_Mus LINE L1 -8 7001 6529 3 1048 738 252 199 36 chrX 60770958 60771322 -105878974 + L1_Mur1 LINE L1 74 410 -6572 3 1048 1984 147 63 0 chrX 60771628 60771976 -105878320 - Lx4A LINE L1 -1042 6016 5647 3 1048 887 222 31 5 chrX 60771984 60772179 -105878117 + Lx4A LINE L1 6857 7056 -2 3 1048 1391 297 29 18 chrX 60772434 60772886 -105877410 + Lx8 LINE L1 6197 6653 -820 3 1048 442 345 82 72 chrX 60772896 60773187 -105877109 + MTEa LTR MaLR 12 305 -74 3 1048 423 0 0 0 chrX 60773199 60773246 -105877050 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 1048 306 342 49 11 chrX 60773303 60773486 -105876810 + L1ME1 LINE L1 5015 5204 -942 3 1048 545 288 91 35 chrX 60773486 60773828 -105876468 + L1ME1 LINE L1 5721 6081 -98 3 1048 242 152 0 0 chrX 60773802 60773848 -105876448 - L1_Mur2 LINE L1 -1469 4408 4363 3 1048 3250 250 124 17 chrX 60776839 60777651 -105872645 - Lx6 LINE L1 -16 7444 6526 3 1048 2733 90 20 0 chrX 60777651 60778041 -105872255 + MTB LTR MaLR 1 398 -2 3 1048 3250 250 124 17 chrX 60778041 60778188 -105872108 - Lx6 LINE L1 -935 6525 6382 3 1048 2373 239 101 22 chrX 60778219 60778861 -105871435 + Lx6 LINE L1 5651 6343 -1117 3 1048 372 269 75 24 chrX 60778873 60779008 -105871288 - L1M4 LINE L1 -1254 4892 4754 3 1048 4856 134 22 0 chrX 60779008 60779762 -105870534 - Lx2 LINE L1 -2 6995 6225 3 1048 372 269 75 24 chrX 60779762 60779839 -105870457 - L1M4 LINE L1 -1393 4753 4669 3 1048 281 201 279 56 chrX 60781562 60781741 -105868555 + Charlie5 DNA MER1_type 2364 2582 -42 3 1048 286 280 109 10 chrX 60781901 60782002 -105868294 - B4A SINE B4 -20 272 162 3 1048 21 0 0 0 chrX 60782131 60782152 -105868144 + AT_rich Low_complexity Low_complexity 1 21 0 3 1048 651 301 84 40 chrX 60783043 60783753 -105866543 - L1MA4A LINE L1 -281 6010 5254 3 1048 436 351 96 110 chrX 60783882 60784195 -105866101 - B4A SINE B4 -9 283 1 4 1048 1229 337 85 84 chrX 60784196 60784555 -105865741 - L1MA4A LINE L1 -940 5203 4853 3 1048 1014 54 0 0 chrX 60784555 60784684 -105865612 + (GAA)n Simple_repeat Simple_repeat 3 131 0 4 1048 1229 337 85 84 chrX 60784684 60785183 -105865113 - L1MA4A LINE L1 -1291 4852 4355 3 1048 1157 28 35 0 chrX 60785183 60785325 -105864971 - B1_Mm SINE Alu 0 147 1 4 1048 1229 337 85 84 chrX 60785325 60785638 -105864658 - L1MA4A LINE L1 -1789 4354 4030 3 1048 578 256 103 25 chrX 60785705 60785909 -105864387 - Lx8 LINE L1 -2 7471 7252 4 1048 279 250 4 0 chrX 60786038 60786134 -105864162 + L1MD LINE L1 3504 3606 -2540 4 1048 3969 49 4 0 chrX 60786165 60786655 -105863641 - L1Md_F2 LINE L1 -2 6580 6089 4 1048 3230 184 143 70 chrX 60786659 60787488 -105862808 - RMER19B LTR ERVK -12 890 1 4 1048 198 0 0 0 chrX 60787605 60787627 -105862669 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 4 1048 234 195 207 0 chrX 60787639 60787721 -105862575 - L1_Mur3 LINE L1 -1939 3941 3843 4 1048 300 279 14 68 chrX 60787985 60788131 -105862165 - L1MB1 LINE L1 -232 5936 5799 4 1048 1767 224 129 38 chrX 60788108 60788717 -105861579 - Lx9 LINE L1 -2 7642 6978 4 1048 1587 249 87 5 chrX 60788719 60789099 -105861197 + MTD LTR MaLR 1 411 -8 4 1048 733 263 24 63 chrX 60789103 60789355 -105860941 + MTD-int LTR MaLR 1 242 -1016 4 1048 1925 281 55 47 chrX 60789774 60790529 -105859767 + MTD-int LTR MaLR 244 1092 -166 4 1048 2896 62 0 0 chrX 60790536 60790905 -105859391 + L1Md_T LINE L1 6213 6581 -1 4 1048 314 328 0 8 chrX 60791143 60791266 -105859030 + L1M3 LINE L1 4791 4912 -1228 4 1048 229 388 29 15 chrX 60791304 60791440 -105858856 + B1_Mus1 SINE Alu 11 148 0 4 1048 436 308 85 44 chrX 60791450 60791840 -105858456 + L1M3 LINE L1 4950 5355 -785 4 1048 463 209 0 0 chrX 60791856 60791947 -105858349 + Lx6 LINE L1 7174 7264 -196 4 1048 2529 29 0 7 chrX 60791948 60792256 -105858040 - L1Md_F3 LINE L1 0 6584 6279 4 1048 1503 50 0 0 chrX 60792256 60792437 -105857859 + L1Md_F3 LINE L1 6103 6283 -301 4 1048 846 251 20 0 chrX 60792441 60792636 -105857660 + Lx6 LINE L1 7258 7456 -4 4 1048 452 271 41 33 chrX 60792896 60793018 -105857278 - B3A SINE B2 -67 131 9 4 1048 1274 244 109 21 chrX 60793052 60793391 -105856905 - Lx5 LINE L1 -12 7038 6670 4 1048 1054 166 0 6 chrX 60793705 60793875 -105856421 - B2_Mm2 SINE B2 -26 169 1 4 1048 330 26 0 0 chrX 60793903 60793942 -105856354 + (TC)n Simple_repeat Simple_repeat 2 40 0 4 1048 351 0 0 0 chrX 60793942 60793980 -105856316 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1048 628 91 18 0 chrX 60793982 60794092 -105856204 + (TC)n Simple_repeat Simple_repeat 2 113 0 4 1048 216 67 0 0 chrX 60794092 60794122 -105856174 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1048 1780 80 8 4 chrX 60794593 60794845 -105855451 + L1_Mus2 LINE L1 6314 6566 0 4 1048 381 148 0 0 chrX 60795111 60795192 -105855104 + (TCC)n Simple_repeat Simple_repeat 2 82 0 4 1048 21 0 0 0 chrX 60795395 60795416 -105854880 + AT_rich Low_complexity Low_complexity 1 21 0 4 1048 465 324 61 61 chrX 60795628 60795809 -105854487 + MER63A DNA AcHobo 30 210 0 4 1048 7721 74 0 1 chrX 60795936 60797280 -105853016 + L1_Mus1 LINE L1 5240 6567 0 4 1048 7999 118 20 3 chrX 60797981 60799522 -105850774 - Lx3A LINE L1 -785 6196 4637 4 1048 307 55 18 18 chrX 60799522 60799577 -105850719 + (TTTTTG)n Simple_repeat Simple_repeat 2 56 0 4 1048 456 127 9 97 chrX 60799579 60799692 -105850604 - Lx3A LINE L1 -1225 4661 4559 4 1048 4796 141 11 10 chrX 60799692 60800474 -105849822 + Lx3A LINE L1 6197 6979 -2 4 1048 21 36 0 0 chrX 60800475 60800503 -105849793 + AT_rich Low_complexity Low_complexity 1 28 0 4 1048 261 360 84 17 chrX 60800547 60800725 -105849571 - MER31B LTR ERV1 -184 282 93 4 1048 27 62 0 0 chrX 60801058 60801106 -105849190 + AT_rich Low_complexity Low_complexity 1 48 0 4 1048 510 17 0 0 chrX 60801113 60801172 -105849124 + (TA)n Simple_repeat Simple_repeat 2 60 0 4 1048 1747 303 30 99 chrX 60801198 60801385 -105848911 - Lx5 LINE L1 -53 6997 6807 4 1048 369 0 0 0 chrX 60801385 60801426 -105848870 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 4 1048 1747 303 30 99 chrX 60801426 60802033 -105848263 - Lx5 LINE L1 -244 6806 6258 4 1048 285 128 0 0 chrX 60802083 60802130 -105848166 + (T)n Simple_repeat Simple_repeat 1 47 0 4 1048 9429 75 5 16 chrX 60802150 60804187 -105846109 - L1Md_F2 LINE L1 0 6582 4577 4 1048 2697 234 42 18 chrX 60804183 60805162 -105845134 - L1_Mur3 LINE L1 -3894 1983 981 4 1048 31 44 0 0 chrX 60805752 60805797 -105844499 + AT_rich Low_complexity Low_complexity 1 45 0 4 1048 6883 114 9 8 chrX 60805891 60806878 -105843418 + L1_Mus3 LINE L1 5271 6260 -378 4 1048 3512 8 5 0 chrX 60806878 60807272 -105843024 + MTA_Mm LTR MaLR 1 396 0 4 1048 8892 37 9 1 chrX 60807272 60808361 -105841935 + MTA_Mm-int LTR MaLR 1 1098 0 4 1048 3512 8 5 0 chrX 60808361 60808755 -105841541 + MTA_Mm LTR MaLR 1 396 0 4 1048 6883 114 12 12 chrX 60808755 60809126 -105841170 + L1_Mus3 LINE L1 6261 6630 -8 4 1048 740 332 14 0 chrX 60809345 60809556 -105840740 - MER20 DNA MER1_type -5 214 1 4 1048 267 396 4 50 chrX 60810457 60810696 -105839600 + L2 LINE L2 2326 2553 -866 4 1048 209 346 13 123 chrX 60810714 60810869 -105839427 + L2 LINE L2 2875 3012 -407 4 1048 21 0 0 0 chrX 60810990 60811011 -105839285 + AT_rich Low_complexity Low_complexity 1 21 0 4 1048 362 95 32 0 chrX 60811215 60811278 -105839018 + (CATA)n Simple_repeat Simple_repeat 4 68 0 4 1048 36 53 0 0 chrX 60812935 60812992 -105837304 + AT_rich Low_complexity Low_complexity 1 57 0 4 1048 396 0 0 0 chrX 60813561 60813605 -105836691 + (A)n Simple_repeat Simple_repeat 1 44 0 4 1048 17727 185 118 25 chrX 60813615 60814741 -105835555 + Lx4B LINE L1 909 2064 -3813 4 1048 639 39 0 0 chrX 60814741 60814819 -105835477 + (TCC)n Simple_repeat Simple_repeat 3 80 0 4 1048 17727 188 78 39 chrX 60814819 60817347 -105832949 + Lx4B LINE L1 2065 4584 -1293 4 16 1151 68 0 0 chrX 60817347 60817494 -105832802 - B1_Mm SINE Alu 0 147 1 4 1049 17727 188 78 39 chrX 60817494 60818121 -105832175 + Lx4B LINE L1 4585 5244 -633 4 1049 372 22 0 0 chrX 60818121 60818166 -105832130 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1049 306 0 0 0 chrX 60818166 60818199 -105832097 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 1049 17727 193 54 21 chrX 60818199 60819805 -105830491 + Lx4B LINE L1 5245 7045 -13 4 1049 898 195 8 109 chrX 60820867 60821132 -105829164 + Lx5 LINE L1 5746 5983 -1067 4 1049 729 337 120 0 chrX 60821121 60821430 -105828866 - Lx8 LINE L1 -834 6639 6294 4 1049 27 29 0 0 chrX 60821485 60821519 -105828777 + AT_rich Low_complexity Low_complexity 1 34 0 4 1049 1157 221 116 35 chrX 60822594 60822904 -105827392 - Lx2B LINE L1 -11 6989 6655 4 1049 817 231 6 0 chrX 60822902 60823075 -105827221 + Lx2B LINE L1 6481 6654 -346 4 1049 3032 57 2 32 chrX 60823522 60823922 -105826374 + RLTR10 LTR ERVK 1 388 -2 4 1049 205 191 0 0 chrX 60824086 60824128 -105826168 + T-rich Low_complexity Low_complexity 1 42 0 4 1049 25 31 0 0 chrX 60824516 60824548 -105825748 + AT_rich Low_complexity Low_complexity 1 32 0 4 1049 426 310 71 36 chrX 60824609 60824917 -105825379 - L1M4 LINE L1 -1600 4546 4228 4 1049 308 344 39 16 chrX 60825037 60825164 -105825132 + MIRb SINE MIR 68 197 -71 4 1049 1354 122 15 0 chrX 60825623 60825820 -105824476 + Lx3B LINE L1 6517 6716 -257 4 1049 243 79 0 0 chrX 60827141 60827179 -105823117 + (T)n Simple_repeat Simple_repeat 1 38 0 4 1049 182 347 107 0 chrX 60827516 60827591 -105822705 - MIRm SINE MIR -4 272 190 4 1049 274 295 110 32 chrX 60827607 60827631 -105822665 + ID_B1 SINE B4 59 224 0 4 1049 439 228 115 23 chrX 60827631 60827761 -105822535 + B1_Mur2 SINE Alu 6 147 -2 4 1049 3563 40 65 2 chrX 60828609 60829056 -105821240 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1049 14152 67 14 2 chrX 60829058 60830877 -105819419 - IAPEz-int LTR ERVK -2 6479 4639 4 1049 1847 81 24 0 chrX 60830857 60831105 -105819191 - IAPEz-int LTR ERVK -5183 2497 2244 4 1049 988 42 0 0 chrX 60831100 60831219 -105819077 - IAPEz-int LTR ERVK -5004 1477 1359 4 1049 3567 57 1 16 chrX 60831219 60831797 -105818499 - IAPEz-int LTR ERVK -5819 662 168 4 1049 260 283 0 0 chrX 60831797 60831850 -105818446 - RLTR27 LTR ERVK -34 275 223 4 1049 1193 149 68 5 chrX 60831850 60832114 -105818182 - IAPEz-int LTR ERVK -7329 252 9 4 1049 3019 39 164 2 chrX 60832115 60832524 -105817772 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1049 207 336 8 0 chrX 60832573 60832695 -105817601 + CT-rich Low_complexity Low_complexity 2 124 0 4 1049 333 0 0 0 chrX 60832996 60833033 -105817263 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1049 4468 172 5 5 chrX 60834135 60834946 -105815350 - Lx2 LINE L1 -1 6996 6186 4 1049 633 154 0 0 chrX 60834975 60835085 -105815211 + (TATG)n Simple_repeat Simple_repeat 2 111 0 4 1049 1224 188 112 24 chrX 60835085 60835379 -105814917 + Lx2 LINE L1 5868 6187 -810 4 1049 959 306 46 26 chrX 60835589 60835938 -105814358 - ORR1E LTR MaLR 0 359 4 4 1049 491 209 186 24 chrX 60835944 60836090 -105814206 - ORR1E-int LTR MaLR -7 1363 1188 4 1049 267 79 0 0 chrX 60836090 60836128 -105814168 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1049 491 209 186 24 chrX 60836128 60836148 -105814148 - ORR1E-int LTR MaLR -183 1187 1170 4 1049 311 336 54 31 chrX 60836154 60836283 -105814013 - ORR1E-int LTR MaLR -379 991 860 4 1049 556 94 0 0 chrX 60836283 60836368 -105813928 + L1_Mur2 LINE L1 3645 3729 -2148 4 1049 324 0 0 0 chrX 60837568 60837604 -105812692 + (A)n Simple_repeat Simple_repeat 1 36 0 4 1049 194 62 31 0 chrX 60837644 60837676 -105812620 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 4 1049 206 120 60 0 chrX 60837678 60837728 -105812568 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 4 1049 2534 247 27 9 chrX 60837880 60838464 -105811832 - RMER12B LTR ERVK -809 595 1 4 1049 216 127 56 14 chrX 60838533 60838605 -105811691 + (TAGA)n Simple_repeat Simple_repeat 1 75 0 4 1049 21 82 0 0 chrX 60838794 60838843 -105811453 + AT_rich Low_complexity Low_complexity 1 49 0 4 1049 26196 112 7 15 chrX 60838922 60843814 -105806482 + L1_Mus1 LINE L1 1724 6567 0 4 1049 564 209 37 7 chrX 60844374 60844509 -105805787 + MARNA DNA Mariner 435 573 -13 4 1049 225 389 41 20 chrX 60845134 60845281 -105805015 - MLT1A0 LTR MaLR -75 290 141 4 1049 220 273 18 0 chrX 60845286 60845341 -105804955 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1049 338 261 51 32 chrX 60845648 60845819 -105804477 + MLT-int LTR MaLR 1611 1732 -3 4 1049 441 0 0 0 chrX 60845854 60845903 -105804393 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1049 341 275 103 27 chrX 60846611 60846757 -105803539 + MIRc SINE MIR 5 161 -107 4 1049 270 300 0 65 chrX 60848219 60848358 -105801938 + L1MB5 LINE L1 6021 6150 -24 4 1049 637 216 78 17 chrX 60848529 60848708 -105801588 + URR1A DNA MER1_type 37 226 0 4 1049 338 246 0 14 chrX 60848828 60848898 -105801398 + RSINE1 SINE B4 78 146 -19 4 1049 222 171 0 0 chrX 60849027 60849068 -105801228 + GA-rich Low_complexity Low_complexity 2 42 0 4 1049 521 306 78 0 chrX 60849310 60849503 -105800793 - B3 SINE B2 -8 208 1 4 1049 2832 222 23 18 chrX 60849716 60850316 -105799980 + RMER20B LTR ERVK 1 603 -24 4 1049 26 74 0 0 chrX 60850742 60850796 -105799500 + AT_rich Low_complexity Low_complexity 1 54 0 4 1049 357 188 37 12 chrX 60850806 60850887 -105799409 - Lx3B LINE L1 -5 6968 6886 5 1049 261 59 0 0 chrX 60850887 60850921 -105799375 + Lx3C LINE L1 6712 6745 -231 5 1049 419 258 84 73 chrX 60851024 60851285 -105799011 - L1M5 LINE L1 -1851 4295 4030 5 1049 306 0 0 0 chrX 60851285 60851319 -105798977 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1049 378 85 0 0 chrX 60851319 60851378 -105798918 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 5 1049 419 258 84 73 chrX 60851378 60851496 -105798800 - L1M5 LINE L1 -2117 4029 3912 5 1049 3165 193 49 18 chrX 60851639 60852310 -105797986 - RLTR17 LTR ERVK 0 692 1 5 1049 573 166 62 19 chrX 60852310 60852470 -105797826 - RMER3D-int LTR ERVK 0 2842 2676 5 1049 3677 189 79 58 chrX 60852468 60853446 -105796850 - RMER3D-int LTR ERVK -837 2005 1008 5 1049 657 228 18 6 chrX 60853712 60853875 -105796421 - Lx6 LINE L1 -8 7452 7288 5 1049 261 418 0 9 chrX 60854112 60854223 -105796073 + ID_B1 SINE B4 100 209 -15 5 1049 3935 158 117 11 chrX 60854379 60855113 -105795183 - Lx3C LINE L1 -2 6974 6163 5 1049 2168 145 20 10 chrX 60855110 60855506 -105794790 + Lx3C LINE L1 5758 6157 -819 5 1049 615 301 65 32 chrX 60856197 60856444 -105793852 - B4A SINE B4 -14 278 24 5 1049 813 225 60 60 chrX 60856528 60856648 -105793648 - Lx9 LINE L1 -3 7641 7519 5 1049 474 65 0 0 chrX 60856648 60856710 -105793586 + (TA)n Simple_repeat Simple_repeat 1 62 0 5 1049 813 225 60 60 chrX 60856710 60856891 -105793405 - Lx9 LINE L1 -126 7518 7340 5 1049 1128 255 59 0 chrX 60856890 60857145 -105793151 - Lx9 LINE L1 -730 6914 6645 5 1049 252 86 0 0 chrX 60857630 60857665 -105792631 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1049 1068 291 47 29 chrX 60857730 60858221 -105792075 + MER31-int LTR ERV1 715 1214 -3722 5 1049 1905 283 28 34 chrX 60858277 60859046 -105791250 + Lx5 LINE L1 6313 7044 -6 5 1049 503 292 8 0 chrX 60859066 60859186 -105791110 + RSINE1 SINE B4 14 134 -31 5 1049 375 106 0 0 chrX 60859196 60859262 -105791034 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 1049 562 272 7 7 chrX 60859328 60859465 -105790831 - B1_Mur1 SINE Alu -10 139 3 5 1049 270 0 0 0 chrX 60859828 60859858 -105790438 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 1049 477 79 0 0 chrX 60859892 60859955 -105790341 + L1_Mus3 LINE L1 6450 6512 -126 5 1049 1248 71 0 0 chrX 60860577 60860745 -105789551 + (GAAA)n Simple_repeat Simple_repeat 2 169 0 5 1049 645 38 0 0 chrX 60860745 60860825 -105789471 + (GGAAA)n Simple_repeat Simple_repeat 1 80 0 5 1049 359 299 68 92 chrX 60860836 60861205 -105789091 + L1M2c LINE L1 1970 2329 -4460 5 1049 939 116 7 52 chrX 60861254 60861408 -105788888 + B1_Mus1 SINE Alu 2 148 0 5 1049 270 132 0 0 chrX 60861409 60861462 -105788834 + (A)n Simple_repeat Simple_repeat 1 53 0 5 1049 1674 214 52 11 chrX 60861970 60862338 -105787958 + RMER20A LTR ERVK 1 383 -133 5 1049 285 29 0 0 chrX 60862658 60862692 -105787604 + (CCA)n Simple_repeat Simple_repeat 1 34 0 5 1049 1992 294 100 64 chrX 60862720 60863550 -105786746 + RMER13A LTR ERVK 1 860 0 5 1049 458 238 87 29 chrX 60863705 60863878 -105786418 + L1M2c LINE L1 4348 4530 -2255 5 1049 247 258 75 15 chrX 60863946 60864013 -105786283 + PB1 SINE Alu 1 71 -46 5 1049 468 0 0 0 chrX 60864394 60864446 -105785850 + (TC)n Simple_repeat Simple_repeat 1 52 0 5 1049 351 0 0 0 chrX 60864446 60864484 -105785812 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1049 28 48 0 0 chrX 60864753 60864795 -105785501 + AT_rich Low_complexity Low_complexity 1 42 0 5 1049 257 389 0 0 chrX 60865450 60865522 -105784774 + RSINE1 SINE B4 2 73 -92 5 1049 329 294 35 13 chrX 60865552 60865683 -105784613 + GA-rich Low_complexity Low_complexity 1 133 0 5 1049 1146 55 0 0 chrX 60865683 60865829 -105784467 + (GGAAA)n Simple_repeat Simple_repeat 5 150 0 5 1049 1289 185 55 34 chrX 60865871 60866026 -105784270 + L1_Mur3 LINE L1 4478 4642 -1238 5 1049 207 0 0 0 chrX 60866026 60866049 -105784247 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1049 288 0 0 0 chrX 60866049 60866080 -105784216 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 1049 1289 185 55 34 chrX 60866080 60866248 -105784048 + L1_Mur3 LINE L1 4643 4808 -1072 5 1049 1725 242 23 16 chrX 60866252 60866689 -105783607 + BGLII_B LTR ERVK 2 441 0 5 1049 1883 233 114 15 chrX 60866690 60867296 -105783000 + L1_Mur3 LINE L1 4808 5473 -407 5 1049 791 201 7 0 chrX 60867298 60867447 -105782849 - URR1A DNA MER1_type -23 203 54 5 1049 331 285 99 35 chrX 60867341 60867483 -105782813 + CYRA11_Mm Unknown Y-chromosome 241 391 -226 5 1049 1072 270 54 3 chrX 60867497 60867794 -105782502 + Lx7 LINE L1 6781 7092 -604 5 1049 21 36 0 0 chrX 60868373 60868401 -105781895 + AT_rich Low_complexity Low_complexity 1 28 0 5 1049 1463 303 90 43 chrX 60868433 60869047 -105781249 + ORR1D2-int LTR MaLR 481 1075 -295 5 1049 1037 290 89 9 chrX 60869061 60869399 -105780897 + ORR1D2 LTR MaLR 6 370 0 5 1049 35802 68 8 9 chrX 60870296 60876327 -105773969 - L1Md_F2 LINE L1 -14 6571 380 5 1049 273 89 0 0 chrX 60876473 60876518 -105773778 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 5 1049 1119 343 59 11 chrX 60876702 60877245 -105773051 - Lx8 LINE L1 -31 7442 6874 5 1049 252 122 0 0 chrX 60877293 60877334 -105772962 + (CAT)n Simple_repeat Simple_repeat 1 41 0 5 1049 189 147 0 0 chrX 60877334 60877368 -105772928 + (CAA)n Simple_repeat Simple_repeat 3 36 0 5 1049 210 330 62 52 chrX 60877700 60877796 -105772500 - L2c LINE L2 -3 3384 3288 5 1049 465 34 0 0 chrX 60877801 60877860 -105772436 + (TC)n Simple_repeat Simple_repeat 2 60 0 5 1049 260 200 14 0 chrX 60877860 60877930 -105772366 + (TG)n Simple_repeat Simple_repeat 1 71 0 5 1049 319 337 44 44 chrX 60878129 60878309 -105771987 + MLT1J2 LTR MaLR 15 194 -254 5 1049 299 85 21 0 chrX 60878407 60878454 -105771842 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1049 477 34 0 0 chrX 60878467 60878526 -105771770 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 1049 317 293 141 73 chrX 60878786 60878963 -105771333 - MLT1B LTR MaLR -199 191 3 5 1049 243 146 0 0 chrX 60879597 60879638 -105770658 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 5 1049 755 315 89 5 chrX 60879644 60879744 -105770552 - Lx9 LINE L1 -25 7619 7517 5 1049 315 0 0 0 chrX 60879744 60879779 -105770517 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1049 755 315 89 5 chrX 60879779 60880061 -105770235 - Lx9 LINE L1 -128 7516 7206 5 1049 697 264 168 10 chrX 60880044 60880335 -105769961 + Lx9 LINE L1 6861 7197 -447 5 1049 4644 72 2 22 chrX 60880343 60880980 -105769316 - L1_Mus4 LINE L1 -6 6630 6007 5 1049 248 288 0 27 chrX 60882050 60882125 -105768171 - ID4_ SINE ID -6 77 5 5 1049 215 119 0 23 chrX 60883212 60883236 -105767060 + (TTA)n Simple_repeat Simple_repeat 1 24 0 5 1049 1559 40 5 0 chrX 60883236 60883434 -105766862 - L1Md_A LINE L1 -4 6578 6380 5 1049 414 0 0 0 chrX 60883434 60883480 -105766816 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1049 215 119 0 23 chrX 60883480 60883497 -105766799 + (TTA)n Simple_repeat Simple_repeat 3 18 0 5 1049 4104 213 81 65 chrX 60883497 60885280 -105765016 - Lx4B LINE L1 -17 7041 5214 5 1049 1349 152 4 0 chrX 60885280 60885516 -105764780 - Lx4B LINE L1 -1014 4863 4627 5 1049 1878 221 25 35 chrX 60885491 60886171 -105764125 - Lx4B LINE L1 -4412 1465 798 5 1049 239 370 86 20 chrX 60887124 60887425 -105762871 - L2 LINE L2 -616 2803 2483 5 1049 186 289 0 0 chrX 60887644 60887689 -105762607 + MIR SINE MIR 88 132 -76 5 1049 35009 49 2 3 chrX 60887707 60893183 -105757113 + L1Md_T LINE L1 28 5589 -297 5 1049 8406 35 0 0 chrX 60893183 60894179 -105756117 + L1Md_T LINE L1 5590 6585 0 5 1049 211 293 40 13 chrX 60894477 60894553 -105755743 + MIRb SINE MIR 186 263 -5 5 1049 23 0 0 0 chrX 60894712 60894735 -105755561 + AT_rich Low_complexity Low_complexity 1 23 0 5 1049 247 382 96 5 chrX 60895503 60895690 -105754606 - L3b LINE CR1 -37 445 242 5 1049 413 342 25 31 chrX 60895823 60895983 -105754313 + B3A SINE B2 1 159 -39 5 1049 2291 211 59 6 chrX 60895998 60896488 -105753808 + RMER20A LTR ERVK 1 516 0 5 1049 195 42 0 0 chrX 60896509 60896533 -105753763 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1049 2453 60 0 9 chrX 60896666 60896987 -105753309 + L1_Mus1 LINE L1 6249 6566 -1 5 1049 22 0 0 0 chrX 60897224 60897246 -105753050 + AT_rich Low_complexity Low_complexity 1 22 0 5 1049 3244 312 83 60 chrX 60898277 60899139 -105751157 + MTE-int LTR MaLR 1 839 -741 5 1049 2858 26 9 3 chrX 60899139 60899414 -105750882 + ORR1A0 LTR MaLR 3 278 -68 5 1049 201 108 0 0 chrX 60899414 60899451 -105750845 + (TTG)n Simple_repeat Simple_repeat 2 38 0 5 1049 2858 26 9 3 chrX 60899451 60899517 -105750779 + ORR1A0 LTR MaLR 279 346 0 5 1049 13588 58 14 1 chrX 60899517 60901285 -105749011 + ORR1A0-int LTR MaLR 1 1792 0 5 1049 3021 29 0 0 chrX 60901285 60901631 -105748665 + ORR1A0 LTR MaLR 1 346 0 5 1049 3244 312 83 60 chrX 60901631 60902284 -105748012 + MTE-int LTR MaLR 840 1551 -29 5 1049 212 276 52 0 chrX 60902821 60902879 -105747417 + B3A SINE B2 93 153 -45 5 1049 267 136 0 0 chrX 60902879 60902938 -105747358 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 1049 509 281 99 55 chrX 60903097 60903350 -105746946 + MLT1B LTR MaLR 114 404 -4 5 1049 1375 243 64 36 chrX 60905021 60905380 -105744916 - ORR1D1 LTR MaLR 0 374 6 5 1049 1223 169 27 18 chrX 60905809 60906032 -105744264 - Lx2B LINE L1 -890 6110 5886 5 1049 263 79 0 0 chrX 60906034 60906072 -105744224 + Lx2B LINE L1 6117 6154 -846 5 1049 1539 182 90 24 chrX 60906077 60906454 -105743842 + RLTR9D LTR ERVK 1 402 -1 5 1049 4665 157 28 20 chrX 60906469 60907286 -105743010 + Lx2B LINE L1 6173 6996 -4 5 1049 337 324 9 9 chrX 60907330 60907439 -105742857 + RSINE1 SINE B4 42 150 -15 5 1049 21 0 0 0 chrX 60907456 60907477 -105742819 + AT_rich Low_complexity Low_complexity 1 21 0 5 1049 468 0 0 0 chrX 60907534 60907586 -105742710 + (TA)n Simple_repeat Simple_repeat 1 52 0 5 1049 333 0 0 0 chrX 60907586 60907622 -105742674 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 1049 1634 226 19 129 chrX 60907626 60908075 -105742221 - RLTR31_Mur LTR ERVK -29 524 123 5 1049 252 77 0 0 chrX 60908075 60908114 -105742182 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 5 1049 1634 226 19 129 chrX 60908114 60908253 -105742043 - RLTR31_Mur LTR ERVK -431 122 1 5 1049 2881 111 36 13 chrX 60908358 60908806 -105741490 - RLTR13C2 LTR ERVK -20 788 331 5 1049 1297 91 6 0 chrX 60908805 60908980 -105741316 - RLTR13C2 LTR ERVK -632 176 1 5 1049 1109 64 0 7 chrX 60909025 60909167 -105741129 - B1_Mm SINE Alu -6 141 1 5 1049 246 128 0 0 chrX 60909493 60909532 -105740764 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1049 180 153 58 12 chrX 60909604 60909690 -105740606 + (TCTA)n Simple_repeat Simple_repeat 3 92 0 5 1049 294 393 79 64 chrX 60909993 60910304 -105739992 + MLT1F1 LTR MaLR 1 324 -245 5 1049 2035 185 83 1 chrX 60910327 60910795 -105739501 - Lx3C LINE L1 -3 6997 6418 5 1049 442 314 69 64 chrX 60910795 60911013 -105739283 + MLT1F1 LTR MaLR 340 558 -11 5 1049 235 312 20 50 chrX 60911839 60911940 -105738356 + MIRb SINE MIR 115 212 -56 5 1049 468 312 63 7 chrX 60913667 60913809 -105736487 + RSINE1 SINE B4 2 151 -14 5 1049 8849 176 50 17 chrX 60913862 60914829 -105735467 + Lx2 LINE L1 3966 4945 -932 6 1049 4979 89 7 0 chrX 60914829 60915514 -105734782 - L1_Mus1 LINE L1 0 6567 5878 6 1049 8849 176 50 17 chrX 60915514 60915611 -105734685 + Lx2 LINE L1 4946 5055 -822 6 1049 1957 97 21 7 chrX 60915611 60915901 -105734395 - L1_Mus4 LINE L1 -1 6635 6342 6 1049 8849 174 43 12 chrX 60915901 60917768 -105732528 + Lx2 LINE L1 5056 6996 -1 6 1049 347 341 60 82 chrX 60919270 60919452 -105730844 - ORR1E LTR MaLR -168 191 6 6 1049 237 108 0 0 chrX 60920376 60920413 -105729883 + (TA)n Simple_repeat Simple_repeat 1 37 0 6 1049 21 36 0 0 chrX 60920443 60920471 -105729825 + AT_rich Low_complexity Low_complexity 1 28 0 6 1049 333 0 0 0 chrX 60920479 60920516 -105729780 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 6 1049 8715 132 11 11 chrX 60920516 60922241 -105728055 - Lx3A LINE L1 -15 6966 5248 6 1049 686 256 155 36 chrX 60922329 60922658 -105727638 - RLTR9A LTR ERVK 0 368 1 6 1049 207 0 0 0 chrX 60922956 60922979 -105727317 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 6 1049 1002 116 14 0 chrX 60922985 60923131 -105727165 - B1_Mus1 SINE Alu 0 148 1 6 1049 1078 86 0 0 chrX 60923314 60923453 -105726843 + B1_Mus1 SINE Alu 3 141 -7 6 1049 288 0 0 0 chrX 60923453 60923485 -105726811 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 6 1049 489 330 55 48 chrX 60925660 60925931 -105724365 + B4A SINE B4 1 273 -19 6 1049 229 322 126 0 chrX 60926115 60926202 -105724094 + MER5A DNA MER1_type 91 188 -1 6 1049 400 48 32 0 chrX 60926342 60926405 -105723891 + (TC)n Simple_repeat Simple_repeat 2 66 0 6 1049 341 294 92 17 chrX 60926851 60927333 -105722963 + L1M3 LINE L1 5079 5617 -567 6 1049 759 203 7 0 chrX 60927332 60927475 -105722821 - Lx5 LINE L1 -701 6349 6206 6 1049 3116 71 2 0 chrX 60927475 60927870 -105722426 - MTA_Mm LTR MaLR 0 396 1 6 1049 7822 48 1 4 chrX 60927870 60928884 -105721412 - MTA_Mm-int LTR MaLR 0 1098 88 6 1049 3790 158 42 7 chrX 60928885 60929714 -105720582 - Lx5 LINE L1 -858 6192 5315 6 1049 2329 48 39 0 chrX 60929714 60930023 -105720273 + L1Md_F3 LINE L1 6264 6584 0 6 1049 3790 148 38 3 chrX 60930023 60930120 -105720176 - Lx5 LINE L1 -563 5314 5218 6 1049 2219 237 45 6 chrX 60930118 60930652 -105719644 + Lx5 LINE L1 6356 6910 -140 6 1049 288 0 0 0 chrX 60931911 60931943 -105718353 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 1049 616 224 103 15 chrX 60931943 60932138 -105718158 - RMER17C-int LTR ERVK -34 3204 2993 6 1049 316 263 80 37 chrX 60933465 60933627 -105716669 - RLTR42-int LTR ERVK -1097 4425 4257 6 1049 257 167 106 0 chrX 60934066 60934132 -105716164 - RLTR42-int LTR ERVK -1427 4095 4023 6 1049 26 0 0 0 chrX 60934404 60934430 -105715866 + AT_rich Low_complexity Low_complexity 1 26 0 6 1049 3968 81 2 15 chrX 60934430 60934968 -105715328 - L1_Mus1 LINE L1 0 6567 6037 6 1049 3549 78 0 0 chrX 60934970 60935601 -105714695 + L1_Mus1 LINE L1 5412 6042 -525 6 1049 1021 159 0 6 chrX 60935616 60935780 -105714516 - B2_Mm2 SINE B2 -28 167 5 6 1049 622 292 152 7 chrX 60936157 60936433 -105713863 - Lx8 LINE L1 -728 6745 6430 6 1049 376 337 143 31 chrX 60936548 60936864 -105713432 + L1MCa LINE L1 791 1143 -5365 6 1049 1154 82 0 0 chrX 60936864 60937011 -105713285 + B1_Mm SINE Alu 1 147 0 6 1049 376 337 143 31 chrX 60937011 60937043 -105713253 + L1MCa LINE L1 1144 1178 -5330 6 1049 234 333 0 14 chrX 60937306 60937376 -105712920 - ID4_ SINE ID -13 70 2 6 1049 21 0 0 0 chrX 60937814 60937835 -105712461 + AT_rich Low_complexity Low_complexity 1 21 0 6 1049 1104 252 71 11 chrX 60937907 60938260 -105712036 + ORR1D1 LTR MaLR 1 374 0 6 1049 783 317 56 40 chrX 60938295 60938617 -105711679 - MTE2a LTR MaLR -50 329 3 6 1049 291 355 0 8 chrX 60938620 60938742 -105711554 - MTE2a-int LTR MaLR -1 1579 1459 6 1049 11446 104 25 11 chrX 60938924 60940716 -105709580 - MusHAL1 LINE L1 -147 2565 750 6 1049 4876 168 8 16 chrX 60940700 60940725 -105709571 - Lx2B LINE L1 -265 6735 6716 6 1049 3953 47 12 14 chrX 60940725 60941218 -105709078 - MT2_Mm LTR ERVL 0 493 2 6 1049 4876 168 8 16 chrX 60941218 60942058 -105708238 - Lx2B LINE L1 -285 6715 5877 6 1049 2263 42 7 20 chrX 60942101 60942395 -105707901 + L1Md_F3 LINE L1 6295 6584 0 6 1049 1603 121 3 49 chrX 60942425 60942713 -105707583 + RLTR10A LTR ERVK 137 411 0 6 1049 1108 96 41 29 chrX 60942715 60942886 -105707410 + RLTR10-int LTR ERVK 304 476 -1511 6 1049 3382 39 5 5 chrX 60942995 60943411 -105706885 - L1Md_F3 LINE L1 0 6584 6169 6 1049 595 53 13 0 chrX 60943459 60943534 -105706762 + IAP-d-int LTR ERVK 6129 6204 -338 6 1049 1065 73 0 0 chrX 60943686 60943823 -105706473 + IAP-d-int LTR ERVK 41 177 -6365 6 1049 853 186 0 0 chrX 60943817 60943973 -105706323 + IAP-d-int LTR ERVK 347 502 -6040 6 1049 1930 65 166 0 chrX 60943959 60944323 -105705973 + IAP-d-int LTR ERVK 4988 5412 -1130 6 1049 687 91 0 0 chrX 60944322 60944421 -105705875 + IAP-d-int LTR ERVK 5923 6021 -521 6 1049 1502 91 5 0 chrX 60944424 60944621 -105705675 + IAP-d-int LTR ERVK 6128 6325 -217 6 1049 3107 106 19 13 chrX 60944711 60945207 -105705089 + RLTR10-int LTR ERVK 1284 1739 -248 6 1049 1603 122 23 46 chrX 60945241 60945543 -105704753 + RLTR10A LTR ERVK 117 411 0 6 1049 321 70 0 174 chrX 60945543 60945612 -105704684 - Lx2A LINE L1 -1126 5882 5826 6 1049 2602 194 0 2 chrX 60945634 60946110 -105704186 - Lx2B LINE L1 -27 5856 5382 6 1049 5387 190 30 4 chrX 60946117 60947253 -105703043 + Lx2B LINE L1 4188 5352 -525 6 131 8052 183 25 26 chrX 60947620 60949216 -105701080 - Lx LINE L1 -201 5682 4089 6 1050 6253 131 14 4 chrX 60949219 60950182 -105700114 + Lx LINE L1 5668 6640 -14 6 1050 3137 32 0 3 chrX 60950182 60950560 -105699736 + L1Md_F3 LINE L1 6206 6582 -2 6 1050 225 209 14 69 chrX 60950707 60950779 -105699517 + RLTR3_Mm LTR ERVK 634 701 -627 6 1050 346 356 33 17 chrX 60950716 60950836 -105699460 - ID_B1 SINE B4 -21 203 82 6 1050 23 0 0 0 chrX 60950836 60950859 -105699437 + AT_rich Low_complexity Low_complexity 1 23 0 6 1050 307 282 0 37 chrX 60950996 60951077 -105699219 + ID4 SINE ID 5 82 -1 6 1050 355 198 159 9 chrX 60952579 60952686 -105697610 - Lx7 LINE L1 -21 7675 7553 6 1050 222 37 0 0 chrX 60952690 60952717 -105697579 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 6 1050 1449 262 3 0 chrX 60952754 60953052 -105697244 - Lx6 LINE L1 -248 7212 6914 6 1050 1688 89 4 58 chrX 60953482 60953743 -105696553 - L1_Mus2 LINE L1 -1 6565 6319 6 1050 615 269 53 0 chrX 60953999 60954170 -105696126 - Lx6 LINE L1 -26 7434 7255 6 1050 193 102 67 17 chrX 60954334 60954394 -105695902 + (TAATG)n Simple_repeat Simple_repeat 3 65 0 6 1050 2334 42 0 7 chrX 60954682 60954972 -105695324 + L1Md_F2 LINE L1 6285 6572 -10 6 1050 723 62 0 0 chrX 60955348 60955445 -105694851 + (GA)n Simple_repeat Simple_repeat 1 97 0 6 1050 839 302 5 0 chrX 60956655 60956847 -105693449 - B3 SINE B2 -23 193 1 6 1050 222 353 53 80 chrX 60956867 60957055 -105693241 - MIR SINE MIR -75 187 5 6 1050 2161 281 108 79 chrX 60958511 60959460 -105690836 - Lx8 LINE L1 -2 7471 6496 6 1050 1173 305 55 49 chrX 60960147 60960647 -105689649 + ORR1E-int LTR MaLR 923 1370 0 6 1050 1185 310 30 24 chrX 60960647 60960981 -105689315 + ORR1E LTR MaLR 1 336 -23 6 1050 1857 220 56 74 chrX 60961010 60961152 -105689144 - MT2A LTR ERVL -54 479 365 6 1050 415 99 49 0 chrX 60961152 60961233 -105689063 + Lx3_Mus LINE L1 6917 7001 -8 6 1050 1857 220 56 74 chrX 60961233 60961576 -105688720 - MT2A LTR ERVL -169 364 3 6 1050 306 0 0 0 chrX 60961614 60961648 -105688648 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1050 259 426 70 43 chrX 60962229 60962273 -105688023 + MLT1K LTR MaLR 139 189 -406 6 1050 3022 64 18 0 chrX 60962273 60962666 -105687630 + MTB LTR MaLR 1 400 0 6 1050 259 426 70 43 chrX 60962666 60962994 -105687302 + MLT1K LTR MaLR 190 521 -74 6 1050 348 285 76 34 chrX 60963914 60964176 -105686120 - L3 LINE CR1 -1835 2654 2382 6 1050 2923 79 2 8 chrX 60964301 60964697 -105685599 - L1Md_F2 LINE L1 -2 6580 6187 6 1050 254 380 65 58 chrX 60965319 60965477 -105684819 + L2 LINE L2 714 877 -2542 6 1050 821 175 0 0 chrX 60965477 60965614 -105684682 + B1_Mur4 SINE Alu 5 141 -9 6 1050 254 380 65 58 chrX 60965614 60965883 -105684413 + L2 LINE L2 878 1144 -2275 6 1050 304 404 73 24 chrX 60966487 60966776 -105683520 + L2 LINE L2 1144 1446 -1973 6 1050 4241 186 30 25 chrX 60966913 60967843 -105682453 - L1_Mur3 LINE L1 -121 5759 4825 6 1050 294 346 0 0 chrX 60968037 60968118 -105682178 - PB1D10 SINE Alu -13 104 24 6 1050 233 308 87 11 chrX 60968046 60968138 -105682158 - ID_B1 SINE B4 -48 176 78 6 1050 201 39 0 0 chrX 60968279 60968305 -105681991 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 1050 457 283 127 5 chrX 60968382 60968595 -105681701 - L1M3 LINE L1 -3362 2778 2540 6 1050 358 336 28 28 chrX 60970664 60970808 -105679488 + B1F SINE Alu 6 149 0 6 1050 246 343 0 29 chrX 60970831 60970936 -105679360 + BC1_Mm scRNA scRNA 11 112 -40 6 1050 805 333 57 0 chrX 60970965 60971280 -105679016 + Lx5 LINE L1 6090 6422 -628 6 1050 263 160 20 0 chrX 60971281 60971331 -105678965 + Lx6 LINE L1 6676 6726 -734 6 1050 1480 225 11 46 chrX 60971350 60971787 -105678509 - MusHAL1 LINE L1 -1941 771 350 6 1050 420 20 0 0 chrX 60971906 60971955 -105678341 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1050 400 281 30 37 chrX 60972042 60972233 -105678063 + L1M2 LINE L1 2897 3085 -3055 6 1050 225 260 39 46 chrX 60972277 60972430 -105677866 + L1M2 LINE L1 3249 3400 -2740 6 1050 924 154 0 0 chrX 60972484 60972627 -105677669 + B1_Mus1 SINE Alu 1 143 -5 6 1050 2211 184 26 0 chrX 60972663 60973054 -105677242 - RMER20A LTR ERVK -115 401 1 6 1050 212 52 63 79 chrX 60973154 60973217 -105677079 + A-rich Low_complexity Low_complexity 1 62 0 6 1050 26 0 0 0 chrX 60973433 60973459 -105676837 + AT_rich Low_complexity Low_complexity 1 26 0 6 1050 4935 36 3 2 chrX 60973731 60974321 -105675975 - L1Md_F3 LINE L1 0 6584 5994 6 1050 386 287 0 0 chrX 60976050 60976165 -105674131 + Lx3C LINE L1 6074 6188 -788 6 1050 2829 192 56 2 chrX 60976161 60976729 -105673567 + Lx3C LINE L1 6376 6974 -2 6 1050 1999 282 69 64 chrX 60977161 60978233 -105672063 + Lx4B LINE L1 5982 7058 0 6 1050 615 294 6 45 chrX 60978242 60978420 -105671876 + B3 SINE B2 27 197 -19 6 1050 258 32 0 0 chrX 60978443 60978474 -105671822 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 6 1050 381 309 87 0 chrX 60978476 60978625 -105671671 + L1M2 LINE L1 4834 4995 -1145 6 1050 369 273 284 39 chrX 60979078 60979307 -105670989 + B4A SINE B4 5 289 -3 6 1050 282 56 0 0 chrX 60979330 60979366 -105670930 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1050 297 0 0 0 chrX 60979367 60979400 -105670896 + (GA)n Simple_repeat Simple_repeat 2 34 0 6 1050 321 233 52 52 chrX 60979882 60980054 -105670242 + Lx9 LINE L1 7466 7637 -7 6 1050 219 114 0 0 chrX 60980391 60980426 -105669870 + (A)n Simple_repeat Simple_repeat 1 35 0 6 1050 391 278 111 97 chrX 60980666 60981192 -105669104 + L1M2 LINE L1 5107 5640 -660 6 1050 24 0 0 0 chrX 60981407 60981431 -105668865 + AT_rich Low_complexity Low_complexity 1 24 0 6 1050 551 122 25 25 chrX 60983237 60983355 -105666941 + CT-rich Low_complexity Low_complexity 4 121 0 6 1050 278 0 54 0 chrX 60983457 60983494 -105666802 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 7 1050 1081 80 0 0 chrX 60983494 60983631 -105666665 - B1_Mm SINE Alu -10 137 1 7 1050 604 341 79 16 chrX 60983833 60984501 -105665795 + L1_Rod LINE L1 1182 1902 -3945 7 1050 384 22 0 0 chrX 60984501 60984546 -105665750 + (CAA)n Simple_repeat Simple_repeat 1 45 0 7 1050 604 351 89 19 chrX 60984546 60984650 -105665646 + L1_Rod LINE L1 1903 2010 -3837 7 1050 23 0 0 0 chrX 60984670 60984693 -105665603 + AT_rich Low_complexity Low_complexity 1 23 0 7 1050 2240 201 39 64 chrX 60984772 60985331 -105664965 + Lx2B LINE L1 6456 7000 0 7 1050 2897 112 0 11 chrX 60985431 60985874 -105664422 + L1_Mus4 LINE L1 6199 6636 0 7 1050 353 297 82 51 chrX 60986008 60986324 -105663972 + L1M3 LINE L1 4974 5302 -841 7 1050 605 277 270 15 chrX 60986382 60986723 -105663573 - Lx9 LINE L1 -147 7497 7070 7 1050 437 283 14 20 chrX 60986735 60986883 -105663413 - Lx9 LINE L1 -788 6856 6710 7 1050 3414 171 32 6 chrX 60987523 60988148 -105662148 - Lx4A LINE L1 0 7058 6418 7 1050 753 271 50 0 chrX 60988649 60988848 -105661448 + B3 SINE B2 5 213 -3 7 1050 230 406 47 0 chrX 60989029 60989075 -105661221 + B4 SINE B4 35 85 -207 7 1050 249 358 63 0 chrX 60989075 60989170 -105661126 + B1F2 SINE Alu 1 101 -48 7 1050 21 57 0 0 chrX 60989593 60989628 -105660668 + AT_rich Low_complexity Low_complexity 1 35 0 7 1050 324 283 36 84 chrX 60990152 60990318 -105659978 + RLTR9B LTR ERVK 280 437 0 7 1050 213 219 0 0 chrX 60990385 60990426 -105659870 + (TAG)n Simple_repeat Simple_repeat 3 43 0 7 1050 247 104 0 40 chrX 60991414 60991464 -105658832 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 7 1050 5841 162 23 31 chrX 60992411 60993134 -105657162 - Lx4A LINE L1 -2 7056 6328 7 1050 1949 171 55 50 chrX 60993134 60993552 -105656744 + RLTR9B2 LTR ERVK 1 420 0 7 1050 5841 162 23 31 chrX 60993552 60993948 -105656348 - Lx4A LINE L1 -731 6327 5946 7 1050 5305 46 0 3 chrX 60993971 60994625 -105655671 - L1Md_F2 LINE L1 -13 6569 5918 7 1050 26 30 0 0 chrX 60994665 60994698 -105655598 + AT_rich Low_complexity Low_complexity 1 33 0 7 1050 414 0 0 0 chrX 60995012 60995058 -105655238 + (TA)n Simple_repeat Simple_repeat 2 47 0 7 1050 24 77 0 0 chrX 60995351 60995403 -105654893 + AT_rich Low_complexity Low_complexity 1 52 0 7 1050 378 0 0 0 chrX 60995644 60995686 -105654610 + (TA)n Simple_repeat Simple_repeat 1 42 0 7 1050 3621 224 68 30 chrX 60995729 60996646 -105653650 - Lx4B LINE L1 -76 6982 6032 7 1050 27 29 0 0 chrX 60996661 60996695 -105653601 + AT_rich Low_complexity Low_complexity 1 34 0 7 1050 191 215 15 0 chrX 60996724 60996789 -105653507 + GA-rich Low_complexity Low_complexity 2 67 0 7 1050 21 0 0 0 chrX 60996990 60997011 -105653285 + AT_rich Low_complexity Low_complexity 1 21 0 7 1050 3098 49 3 0 chrX 60997361 60997747 -105652549 - L1Md_T LINE L1 0 6582 6196 7 1050 25 65 0 0 chrX 60997884 60997930 -105652366 + AT_rich Low_complexity Low_complexity 1 46 0 7 1050 394 309 0 0 chrX 60997933 60998030 -105652266 + B1_Mur3 SINE Alu 2 98 -51 7 1050 210 342 35 18 chrX 60998473 60998586 -105651710 - MIR SINE MIR -32 230 116 7 1050 1144 64 0 0 chrX 60998637 60998777 -105651519 + B1_Mus2 SINE Alu 1 140 -7 7 1050 198 0 0 0 chrX 60998779 60998801 -105651495 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1050 24 32 0 0 chrX 60999709 60999740 -105650556 + AT_rich Low_complexity Low_complexity 1 31 0 7 1050 21 0 0 0 chrX 60999749 60999770 -105650526 + AT_rich Low_complexity Low_complexity 1 21 0 7 1050 3702 148 26 15 chrX 61000949 61001602 -105648694 + Lx3C LINE L1 6315 6974 -2 1 1050 423 107 0 0 chrX 61002407 61002482 -105647814 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 1050 468 0 0 0 chrX 61002482 61002533 -105647763 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1050 3450 201 86 75 chrX 61002533 61003403 -105646893 + RMER19B LTR ERVK 20 901 -1 4 1050 493 274 118 55 chrX 61004205 61004425 -105645871 - ORR1E LTR MaLR 0 370 137 5 1050 184 77 51 0 chrX 61004425 61004464 -105645832 + (TTTTTG)n Simple_repeat Simple_repeat 3 43 0 6 1050 892 111 9 148 chrX 61004490 61004713 -105645583 - L1_Mus3 LINE L1 -1 6637 6446 7 1050 523 239 42 35 chrX 61004713 61004856 -105645440 - ORR1E LTR MaLR -209 150 7 5 1050 269 0 56 0 chrX 61005310 61005346 -105644950 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 8 1050 2561 161 100 26 chrX 61005594 61005719 -105644577 - RMER4B LTR ERVK -1 584 433 9 1050 3795 172 172 3 chrX 61005719 61006490 -105643806 - RMER19B LTR ERVK 0 902 1 1 1050 2561 161 100 26 chrX 61006490 61006895 -105643401 - RMER4B LTR ERVK -153 432 16 9 1050 1618 264 49 5 chrX 61006907 61007295 -105643001 + MTD LTR MaLR 1 405 -14 1 1050 2705 64 14 6 chrX 61007533 61007896 -105642400 + L1Md_F2 LINE L1 6203 6568 -14 1 1050 30 27 0 0 chrX 61007896 61007933 -105642363 + AT_rich Low_complexity Low_complexity 1 37 0 1 1050 235 275 121 0 chrX 61008236 61008327 -105641969 + MLT1A1 LTR MaLR 1 102 -306 1 1050 414 333 8 15 chrX 61008439 61008573 -105641723 + MLT1A1 LTR MaLR 274 406 -2 1 1050 1271 104 0 10 chrX 61008704 61008898 -105641398 + L1Md_F2 LINE L1 6372 6563 -19 1 1050 241 328 98 25 chrX 61009357 61009479 -105640817 - MLT1A LTR MaLR -243 131 1 1 1050 504 0 0 0 chrX 61009479 61009535 -105640761 + (TTC)n Simple_repeat Simple_repeat 2 57 0 1 1050 868 114 7 7 chrX 61010885 61011035 -105639261 + (GA)n Simple_repeat Simple_repeat 1 150 0 1 1050 1458 180 142 12 chrX 61011172 61011510 -105638786 - ORR1C2 LTR MaLR 0 384 3 1 1050 1404 72 0 0 chrX 61013017 61013212 -105637084 + L1_Mm LINE L1 3044 3238 -2645 2 1050 3134 123 69 47 chrX 61013212 61013792 -105636504 + RLTR6_Mm LTR ERV1 1 593 -61 2 1050 18027 57 11 2 chrX 61013794 61016113 -105634183 + L1_Mm LINE L1 3242 5586 -297 2 1050 7777 60 1 3 chrX 61016113 61017105 -105633191 + L1Md_F2 LINE L1 5587 6576 -6 2 1050 1216 114 22 0 chrX 61017135 61017319 -105632977 + B2_Mm2 SINE B2 2 189 -6 2 1050 560 92 23 0 chrX 61017353 61017440 -105632856 + (GAAAA)n Simple_repeat Simple_repeat 2 90 0 2 1050 250 26 51 0 chrX 61017474 61017513 -105632783 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1050 186 43 0 0 chrX 61017513 61017535 -105632761 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 1050 180 77 0 0 chrX 61018032 61018058 -105632238 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2 1050 302 271 186 0 chrX 61018058 61018188 -105632108 - Lx5 LINE L1 -13 7037 6882 2 1050 214 195 0 0 chrX 61018381 61018422 -105631874 + A-rich Low_complexity Low_complexity 1 41 0 2 1050 290 256 78 57 chrX 61018745 61018886 -105631410 + Charlie4a DNA MER1_type 4 147 -361 3 1050 2272 165 0 2 chrX 61019296 61019690 -105630606 - Lx3B LINE L1 -4 6969 6577 3 1050 1228 137 236 15 chrX 61020261 61020595 -105629701 + MERVL_2A-int LTR ERVL 5352 5759 -2 3 1050 2051 131 74 135 chrX 61020596 61021266 -105629030 + MT2C_Mm LTR ERVL 1 594 -7 3 1050 670 173 5 10 chrX 61021276 61021480 -105628816 + GA-rich Low_complexity Low_complexity 1 203 0 3 1050 317 302 10 0 chrX 61022020 61022116 -105628180 + GA-rich Low_complexity Low_complexity 4 100 0 3 1050 380 350 63 22 chrX 61022739 61022961 -105627335 - MT2A LTR ERVL -10 523 293 3 1050 1045 225 38 31 chrX 61022966 61023215 -105627081 - ORR1A4 LTR MaLR 0 378 93 3 1050 597 115 26 0 chrX 61023215 61023328 -105626968 - L1_Mus3 LINE L1 -8 6630 6515 3 1050 907 239 28 171 chrX 61023328 61023471 -105626825 - ORR1A4 LTR MaLR -217 161 42 3 1050 1745 216 172 14 chrX 61023485 61024091 -105626205 - ORR1A4-int LTR MaLR -3 1960 975 3 1050 728 161 39 77 chrX 61024096 61024278 -105626018 - ORR1A4-int LTR MaLR -1107 263 89 3 1050 524 231 8 0 chrX 61024278 61024395 -105625901 - Lx5 LINE L1 -786 6264 6147 3 1050 1314 269 76 132 chrX 61024413 61025265 -105625031 + RLTR22_Mur LTR ERVK 1 805 -1043 3 1050 273 340 75 61 chrX 61025392 61025539 -105624757 + RMER12 LTR ERVK 1000 1148 -174 4 1050 576 78 0 0 chrX 61025539 61025616 -105624680 + Lx3A LINE L1 6548 6624 -357 4 1050 1213 117 5 5 chrX 61025618 61025815 -105624481 + Lx3A LINE L1 6775 6971 -10 4 1050 27 0 0 0 chrX 61025815 61025842 -105624454 + AT_rich Low_complexity Low_complexity 1 27 0 4 1050 3038 201 23 11 chrX 61026049 61026912 -105623384 - Lx5 LINE L1 -953 6097 5220 3 1050 1154 148 7 129 chrX 61026900 61027194 -105623102 - Lx5 LINE L1 -1513 4364 4107 3 1050 1584 186 42 50 chrX 61027195 61027652 -105622644 - RMER17C LTR ERVK -519 439 16 4 1050 4074 138 11 11 chrX 61027652 61028370 -105621926 - Lx5 LINE L1 -1772 4105 3388 3 1050 7555 167 47 72 chrX 61028385 61029471 -105620825 - RLTR22_Mus LTR ERVK -17 1791 752 4 1050 7906 49 1 1 chrX 61029471 61030455 -105619841 + L1Md_F3 LINE L1 5587 6570 -14 4 1050 7555 167 47 72 chrX 61030455 61031205 -105619091 - RLTR22_Mus LTR ERVK -1057 751 1 4 1050 796 163 42 0 chrX 61031205 61031371 -105618925 - Lx5 LINE L1 -2487 3390 3218 3 1050 24958 142 25 13 chrX 61031378 61035753 -105614543 - L1_Mus4 LINE L1 -3 6633 2196 4 1050 2492 90 62 30 chrX 61035753 61036153 -105614143 + L1Md_F2 LINE L1 6169 6581 -1 4 1050 24958 147 33 14 chrX 61036153 61036377 -105613919 - L1_Mus4 LINE L1 -3688 2195 1976 4 1050 4232 46 4 2 chrX 61036377 61036899 -105613397 + L1Md_F3 LINE L1 6059 6581 -3 4 1050 24958 158 29 9 chrX 61036899 61038473 -105611823 - L1_Mus4 LINE L1 -3908 1975 362 4 1050 3570 178 15 41 chrX 61038471 61039275 -105611021 - Lx5 LINE L1 -2642 3235 2453 3 1050 4640 168 46 42 chrX 61039265 61040597 -105609699 - Lx5 LINE L1 -3668 2209 815 3 1050 3059 300 43 27 chrX 61040972 61042138 -105608158 - Lx7 LINE L1 -281 7415 6231 4 1050 2370 188 32 2 chrX 61042130 61042568 -105607728 - L1_Mur3 LINE L1 -161 5719 5269 5 1050 1778 262 31 68 chrX 61042569 61043085 -105607211 + Lx6 LINE L1 6938 7434 -26 5 1050 446 214 46 3 chrX 61043102 61043243 -105607053 - Lx7 LINE L1 -1447 6249 6101 4 1050 208 182 23 0 chrX 61043612 61043656 -105606640 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 5 1050 180 345 103 0 chrX 61044463 61044579 -105605717 + MIR SINE MIR 78 205 -57 5 1050 204 67 0 0 chrX 61045554 61045584 -105604712 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 5 1050 661 331 44 47 chrX 61045633 61045975 -105604321 - MLT2C1 LTR ERVL -56 341 1 5 1050 8572 14 0 0 chrX 61046085 61047055 -105603241 + L1Md_A LINE L1 5612 6581 -1 5 1050 348 203 14 0 chrX 61047745 61047819 -105602477 - MTD LTR MaLR 0 419 345 5 1050 1239 256 105 6 chrX 61047902 61048217 -105602079 - MTD LTR MaLR -68 351 6 5 1050 1013 189 27 48 chrX 61048460 61048655 -105601641 + RMER17C LTR ERVK 1 191 -219 5 1050 831 117 0 0 chrX 61048655 61048817 -105601479 + (TC)n Simple_repeat Simple_repeat 1 162 0 5 1050 1013 189 27 48 chrX 61048817 61048916 -105601380 + RMER17C LTR ERVK 192 289 -121 5 1050 329 278 11 22 chrX 61048910 61049002 -105601294 - B3A SINE B2 -105 93 3 6 1050 239 157 20 0 chrX 61049151 61049202 -105601094 + (TTG)n Simple_repeat Simple_repeat 3 54 0 6 1050 247 282 12 25 chrX 61049669 61049749 -105600547 - MIRc SINE MIR -120 148 70 6 1050 4643 186 43 1 chrX 61049751 61050689 -105599607 - Lx5 LINE L1 -2 5875 4899 6 1050 3977 216 149 18 chrX 61050677 61051688 -105598608 + Lx5 LINE L1 5902 7045 -5 6 1050 195 42 0 0 chrX 61052019 61052043 -105598253 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 6 1050 252 0 0 0 chrX 61052108 61052136 -105598160 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 6 1050 1152 69 0 0 chrX 61052136 61052280 -105598016 - B1_Mm SINE Alu -2 145 2 6 1050 22 0 0 0 chrX 61052392 61052414 -105597882 + AT_rich Low_complexity Low_complexity 1 22 0 6 1050 21 0 0 0 chrX 61053461 61053482 -105596814 + AT_rich Low_complexity Low_complexity 1 21 0 6 1050 23 33 0 0 chrX 61053514 61053544 -105596752 + AT_rich Low_complexity Low_complexity 1 30 0 6 1050 592 255 13 46 chrX 61053903 61054055 -105596241 + B1_Mur2 SINE Alu 3 149 0 7 1050 528 104 0 0 chrX 61054207 61054284 -105596012 + B1_Mm SINE Alu 59 135 -12 7 1050 402 21 0 0 chrX 61054284 61054331 -105595965 + (CAAAA)n Simple_repeat Simple_repeat 4 50 0 7 1050 643 246 0 36 chrX 61054826 61054965 -105595331 + B3 SINE B2 2 135 -81 7 1050 786 192 12 18 chrX 61054976 61055146 -105595150 + Lx7 LINE L1 7527 7695 -1 7 1050 23 33 0 0 chrX 61055278 61055308 -105594988 + AT_rich Low_complexity Low_complexity 1 30 0 7 1050 246 62 0 0 chrX 61055475 61055507 -105594789 + (CAA)n Simple_repeat Simple_repeat 2 33 0 7 1050 365 271 43 76 chrX 61055644 61055828 -105594468 - RMER12 LTR ERVK 0 1322 1145 7 1050 2299 63 22 9 chrX 61055951 61056269 -105594027 + L1Md_F2 LINE L1 6261 6582 0 7 1050 3522 81 11 0 chrX 61056275 61056743 -105593553 + L1_Mus1 LINE L1 6094 6566 -1 7 1050 4923 111 31 19 chrX 61056866 61057667 -105592629 - RLTR22_Mur LTR ERVK -1037 811 1 8 1050 212 381 19 0 chrX 61057781 61057886 -105592410 + MIR SINE MIR 85 191 -71 8 1050 378 42 0 0 chrX 61058049 61058097 -105592199 + (T)n Simple_repeat Simple_repeat 1 48 0 8 1050 1115 57 0 0 chrX 61058103 61058243 -105592053 - B1_Mm SINE Alu -7 140 1 8 1050 327 377 6 51 chrX 61058385 61058561 -105591735 + LTR33B LTR ERVL 22 189 -314 8 1050 1833 260 52 76 chrX 61058784 61059366 -105590930 + RMER15 LTR ERVL 8 575 0 8 1050 32 0 0 0 chrX 61059378 61059410 -105590886 + AT_rich Low_complexity Low_complexity 1 32 0 8 1050 325 93 0 0 chrX 61059413 61059456 -105590840 + L1_Mus1 LINE L1 6166 6208 -359 8 1050 290 87 22 0 chrX 61059478 61059524 -105590772 + (TTC)n Simple_repeat Simple_repeat 2 48 0 8 1050 646 228 154 60 chrX 61060096 61060297 -105589999 - RLTR17 LTR ERVK 0 692 473 8 1050 1287 158 20 49 chrX 61060302 61060549 -105589747 - RLTR17 LTR ERVK -452 240 1 8 1050 3634 155 82 83 chrX 61060692 61061599 -105588697 + RMER17A2 LTR ERVK 1 906 0 9 1050 208 343 21 49 chrX 61061731 61061875 -105588421 - L2 LINE L2 -963 2456 2317 9 1050 22 56 0 0 chrX 61062555 61062591 -105587705 + AT_rich Low_complexity Low_complexity 1 36 0 9 1050 26 30 0 0 chrX 61062846 61062879 -105587417 + AT_rich Low_complexity Low_complexity 1 33 0 9 1050 22641 68 1 1 chrX 61062992 61065969 -105584327 - L1Md_F2 LINE L1 -73 5810 2835 9 1050 3278 55 0 0 chrX 61065967 61066371 -105583925 + L1Md_F2 LINE L1 5812 6215 -367 9 1050 1844 60 0 0 chrX 61066366 61066599 -105583697 + L1Md_F2 LINE L1 6338 6570 -12 9 1050 669 25 0 0 chrX 61066719 61066798 -105583498 + (TA)n Simple_repeat Simple_repeat 2 80 0 9 1050 1790 202 5 65 chrX 61067076 61067458 -105582838 - ORR1B2 LTR MaLR -8 359 1 9 1050 5510 187 69 70 chrX 61067465 61068033 -105582263 - ORR1B2-int LTR MaLR -99 1410 795 9 1050 188 35 35 0 chrX 61068033 61068062 -105582234 + (TTG)n Simple_repeat Simple_repeat 2 31 0 9 1050 5510 194 86 71 chrX 61068062 61068909 -105581387 - ORR1B2-int LTR MaLR -715 794 3 9 1050 492 172 39 22 chrX 61068912 61069061 -105581235 - ORR1B2 LTR MaLR -2 419 237 9 1050 485 232 116 0 chrX 61069372 61069484 -105580812 - RMER20B LTR ERVK -502 125 1 9 1050 1580 205 58 40 chrX 61069484 61069813 -105580483 - ORR1B1 LTR MaLR -74 320 1 9 1050 733 264 73 78 chrX 61071001 61071371 -105578925 - RLTR9A LTR ERVK 0 368 1 1 1050 5393 91 37 0 chrX 61072260 61073022 -105577274 - L1_Mus2 LINE L1 0 6566 5777 1 1050 403 338 31 68 chrX 61073023 61073326 -105576970 + MLT2B1 LTR ERVL 1 311 -290 1 1050 1978 182 9 37 chrX 61073537 61073993 -105576303 - L1_Mur2 LINE L1 -1160 4717 4275 1 1050 552 312 29 24 chrX 61074799 61075009 -105575287 + LTR82A LTR ERVL 638 848 -24 1 1050 318 67 0 0 chrX 61075074 61075119 -105575177 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 1 1050 494 346 7 7 chrX 61075468 61075605 -105574691 - MER45A DNA Tip100 -19 159 23 1 1050 632 101 11 72 chrX 61076296 61076477 -105573819 + (TATATG)n Simple_repeat Simple_repeat 2 171 0 1 1050 204 158 0 26 chrX 61076478 61076517 -105573779 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 1 1050 814 302 32 31 chrX 61077295 61077827 -105572469 - RMER1B Other Other -700 366 50 1 1050 233 176 78 0 chrX 61077843 61077894 -105572402 - RMER20B LTR ERVK -572 55 1 1 1050 1845 168 12 76 chrX 61077971 61078378 -105571918 + Lx2 LINE L1 6617 6997 0 1 1050 417 20 0 0 chrX 61078423 61078473 -105571823 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1050 1819 213 57 10 chrX 61078997 61079382 -105570914 + MTC LTR MaLR 1 403 -18 1 131 2792 102 8 0 chrX 61079442 61079836 -105570460 + MTB LTR MaLR 4 400 0 1 1051 371 349 57 66 chrX 61080810 61081022 -105569274 + MLT2C1 LTR ERVL 129 338 -59 1 1051 351 0 0 0 chrX 61081050 61081089 -105569207 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 1051 385 194 0 0 chrX 61081354 61081421 -105568875 + RMER17B LTR ERVK 5 71 -887 1 1051 1067 109 0 0 chrX 61081421 61081568 -105568728 + B1_Mus1 SINE Alu 2 148 0 1 1051 366 228 98 66 chrX 61081594 61081716 -105568580 + RMER17B LTR ERVK 62 187 -771 1 1051 2408 14 0 4 chrX 61081716 61081994 -105568302 - L1Md_F3 LINE L1 -703 5881 5605 1 1051 5478 47 10 4 chrX 61081994 61082685 -105567611 + L1Md_F3 LINE L1 5890 6584 0 1 1051 3115 221 69 14 chrX 61082686 61082924 -105567372 + RMER17B LTR ERVK 176 439 -519 1 1051 360 0 0 0 chrX 61082924 61082964 -105567332 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1051 3115 221 69 14 chrX 61082964 61083467 -105566829 + RMER17B LTR ERVK 440 957 -1 1 1051 532 0 29 0 chrX 61083742 61083810 -105566486 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 1051 21 0 0 0 chrX 61084673 61084694 -105565602 + AT_rich Low_complexity Low_complexity 1 21 0 1 1051 359 283 139 32 chrX 61084712 61084993 -105565303 + L1M4b LINE L1 1645 1955 -5379 1 1051 283 23 0 43 chrX 61085048 61085094 -105565202 + (CAAAAA)n Simple_repeat Simple_repeat 5 48 0 1 1051 234 155 0 65 chrX 61085204 61085266 -105565030 + T-rich Low_complexity Low_complexity 3 60 0 1 1051 1180 283 14 27 chrX 61085274 61085687 -105564609 - Lx5 LINE L1 -725 6735 6111 1 1051 1926 330 3 20 chrX 61085676 61086264 -105564032 + Lx5 LINE L1 6465 7042 -8 1 1051 1253 60 0 0 chrX 61086275 61086441 -105563855 + L1Md_F2 LINE L1 6405 6570 -12 1 1051 10272 82 18 4 chrX 61086630 61086706 -105563590 - MusHAL1 LINE L1 -1 2711 2635 1 1051 1692 54 5 9 chrX 61086706 61086930 -105563366 + L1Md_F2 LINE L1 6359 6581 -1 1 1051 10272 82 18 4 chrX 61086930 61088345 -105561951 - MusHAL1 LINE L1 -78 2634 1199 1 1051 1230 166 22 151 chrX 61088345 61088749 -105561547 + RMER17C LTR ERVK 56 407 -3 1 1051 1220 193 0 15 chrX 61088754 61088959 -105561337 + RMER17C-int LTR ERVK 2 203 -3035 1 1051 8188 28 10 2 chrX 61089215 61090352 -105559944 - L1Md_T LINE L1 0 6582 5433 1 1051 329 26 0 0 chrX 61090359 61090397 -105559899 + MusHAL1 LINE L1 1198 1235 -1477 1 1051 1770 269 125 96 chrX 61090397 61092164 -105558132 + RMER17C-int LTR ERVK 217 2034 -1204 1 1051 1040 165 20 0 chrX 61092181 61092381 -105557915 + RMER17C-int LTR ERVK 2156 2359 -879 1 1051 798 119 122 27 chrX 61092369 61092516 -105557780 + RMER17C-int LTR ERVK 2532 2692 -546 1 1051 2113 127 43 0 chrX 61092514 61092836 -105557460 + RMER17C-int LTR ERVK 2903 3238 0 1 1051 1010 212 16 89 chrX 61092839 61093350 -105556946 + RMER17C LTR ERVK 77 439 -519 1 1051 682 155 0 0 chrX 61093355 61093471 -105556825 - L1_Mur3 LINE L1 -1741 4139 4024 1 1051 283 299 0 0 chrX 61093472 61093539 -105556757 + tRNA-Lys-AAG tRNA tRNA 8 74 -2 1 1051 1109 247 29 0 chrX 61093615 61093854 -105556442 + MERVK26-int LTR ERVK 6548 6793 -126 1 1051 591 33 0 32 chrX 61093884 61094031 -105556265 - L1Md_F3 LINE L1 0 6584 6470 1 1051 16280 58 2 11 chrX 61094027 61096895 -105553401 - L1Md_F2 LINE L1 -12 6570 3735 1 1051 682 212 7 7 chrX 61096896 61097034 -105553262 + MERVK26-int LTR ERVK 6780 6917 -2 1 1051 639 267 75 71 chrX 61097151 61097417 -105552879 + RMER20B LTR ERVK 98 364 -263 1 1051 7093 99 3 1 chrX 61097533 61099043 -105551253 - L1Md_F2 LINE L1 0 6582 5070 1 1051 6412 88 25 0 chrX 61099041 61099956 -105550340 + L1Md_F2 LINE L1 4134 5071 -812 1 1051 321 114 124 11 chrX 61099962 61100051 -105550245 - L1_Mur3 LINE L1 -2655 3225 3127 1 1051 27 29 0 0 chrX 61100069 61100103 -105550193 + AT_rich Low_complexity Low_complexity 1 34 0 1 1051 4180 148 68 0 chrX 61100104 61100800 -105549496 - Lx3A LINE L1 -4 6977 6235 1 1051 1943 215 28 2 chrX 61100802 61101263 -105549033 - L1_Mur3 LINE L1 -4109 1771 1299 1 1051 848 159 0 6 chrX 61101267 61101425 -105548871 + CT-rich Low_complexity Low_complexity 3 159 0 1 1051 1234 68 6 11 chrX 61101427 61101606 -105548690 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 1 1051 361 127 87 43 chrX 61101606 61101721 -105548575 - L1_Mur3 LINE L1 -6443 1285 1166 1 1051 6974 92 17 2 chrX 61101745 61103042 -105547254 - L1_Mus1 LINE L1 0 6567 5253 1 1051 4620 103 0 3 chrX 61103039 61103704 -105546592 + L1_Mus1 LINE L1 4611 5273 -610 1 1051 7626 73 5 0 chrX 61103720 61104711 -105545585 + L1Md_F2 LINE L1 5587 6582 0 1 1051 1560 259 70 20 chrX 61104737 61105197 -105545099 - L1_Mur3 LINE L1 -7189 539 57 1 1051 512 225 0 21 chrX 61105266 61105332 -105544964 + T-rich Low_complexity Low_complexity 79 142 0 1 1051 1070 92 0 0 chrX 61105332 61105473 -105544823 - B1_Mus1 SINE Alu -7 141 1 1 1051 512 225 0 21 chrX 61105473 61105551 -105544745 + T-rich Low_complexity Low_complexity 1 78 0 1 1051 873 138 0 0 chrX 61105552 61105697 -105544599 + (TCC)n Simple_repeat Simple_repeat 2 146 0 1 1051 474 218 125 31 chrX 61105724 61105852 -105544444 - B1_Mus1 SINE Alu -6 142 3 1 1051 745 262 0 0 chrX 61105886 61106035 -105544261 - B1_Mur2 SINE Alu 0 149 1 1 1051 225 191 0 0 chrX 61106035 61106077 -105544219 + L1M1 LINE L1 5686 5727 -573 1 1051 37450 17 1 7 chrX 61106103 61111303 -105538993 + L1Md_A LINE L1 422 5586 -297 1 1051 8736 17 0 0 chrX 61111303 61112299 -105537997 + L1Md_A LINE L1 5587 6582 0 1 1051 239 307 9 0 chrX 61112299 61112413 -105537883 + L1M1 LINE L1 5770 5884 -416 1 1051 314 189 31 21 chrX 61112651 61112748 -105537548 + L1MA5 LINE L1 6202 6299 -1 1 1051 506 250 98 43 chrX 61113000 61113184 -105537112 + RMER15 LTR ERVL 27 220 -355 1 1051 855 303 91 18 chrX 61113182 61113521 -105536775 - ORR1D2 LTR MaLR -6 364 1 1 1051 1268 303 82 0 chrX 61113544 61113920 -105536376 + RMER15 LTR ERVL 169 575 0 1 1051 207 188 0 0 chrX 61114014 61114062 -105536234 + A-rich Low_complexity Low_complexity 2 49 0 1 1051 23 0 0 0 chrX 61114342 61114365 -105535931 + AT_rich Low_complexity Low_complexity 1 23 0 1 1051 6461 144 61 14 chrX 61114366 61115502 -105534794 - Lx4A LINE L1 -2 7056 5868 1 1051 493 100 0 22 chrX 61115521 61115613 -105534683 + (TA)n Simple_repeat Simple_repeat 2 91 0 1 1051 1226 214 71 0 chrX 61115618 61115870 -105534426 - Lx9 LINE L1 -181 7463 7194 1 1051 2040 71 37 0 chrX 61117408 61117676 -105532620 - L1_Mus1 LINE L1 -1 6566 6289 1 1051 238 361 89 18 chrX 61118092 61118261 -105532035 + MIR SINE MIR 3 183 -79 1 1051 22 0 0 0 chrX 61119090 61119112 -105531184 + AT_rich Low_complexity Low_complexity 1 22 0 1 1051 5220 245 67 19 chrX 61119588 61120934 -105529362 + Lx5 LINE L1 5637 7046 -4 1 1051 402 39 0 0 chrX 61120984 61121036 -105529260 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1051 21 71 0 0 chrX 61121079 61121121 -105529175 + AT_rich Low_complexity Low_complexity 1 42 0 1 1051 231 61 0 0 chrX 61121658 61121691 -105528605 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 1051 681 129 0 0 chrX 61121695 61121811 -105528485 + (GAA)n Simple_repeat Simple_repeat 3 118 0 1 1051 32 43 0 0 chrX 61122187 61122233 -105528063 + AT_rich Low_complexity Low_complexity 1 46 0 1 1051 234 154 39 0 chrX 61123099 61123151 -105527145 + (TTTG)n Simple_repeat Simple_repeat 3 56 0 1 1051 335 219 41 0 chrX 61123167 61123240 -105527056 - B1_Mur1 SINE Alu -33 116 41 1 1051 44 20 0 0 chrX 61123256 61123307 -105526989 + AT_rich Low_complexity Low_complexity 1 51 0 1 1051 3221 96 0 2 chrX 61123307 61123768 -105526528 + L1_Mur1 LINE L1 2549 3008 -2878 1 1051 423 165 44 0 chrX 61123764 61123855 -105526441 + L1_Mur1 LINE L1 3638 3732 -2154 1 1051 27 29 0 0 chrX 61124038 61124072 -105526224 + AT_rich Low_complexity Low_complexity 1 34 0 1 1051 243 262 24 48 chrX 61124527 61124611 -105525685 - MLT1A1 LTR MaLR -5 403 322 1 1051 225 0 0 0 chrX 61126678 61126703 -105523593 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 1051 316 381 14 7 chrX 61126731 61126871 -105523425 + B1F2 SINE Alu 1 141 -8 1 1051 248 145 29 0 chrX 61127269 61127338 -105522958 + (TCTCTG)n Simple_repeat Simple_repeat 6 76 0 1 1051 212 143 18 0 chrX 61127335 61127391 -105522905 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1051 33 73 0 0 chrX 61129000 61129068 -105521228 + AT_rich Low_complexity Low_complexity 1 68 0 1 1051 214 321 35 35 chrX 61129262 61129375 -105520921 + MIR SINE MIR 76 188 -74 1 1051 338 351 29 117 chrX 61129994 61130233 -105520063 + B4 SINE B4 2 219 -73 1 1051 639 99 0 0 chrX 61130316 61130417 -105519879 + (CA)n Simple_repeat Simple_repeat 2 102 0 1 1051 5222 121 16 3 chrX 61130418 61131279 -105519017 - L1_Mus4 LINE L1 0 6636 5843 1 1051 339 85 0 0 chrX 61131279 61131326 -105518970 + (T)n Simple_repeat Simple_repeat 1 47 0 1 1051 26549 49 3 3 chrX 61131379 61135430 -105514866 - L1Md_F2 LINE L1 0 6582 2535 1 1051 12706 180 30 18 chrX 61135426 61138039 -105512257 - L1_Mus4 LINE L1 -89 5794 3150 1 1051 10278 58 3 1 chrX 61138048 61140057 -105510239 - L1Md_F2 LINE L1 0 6582 4571 1 1051 34904 77 1 15 chrX 61140051 61146202 -105504094 - L1Md_F2 LINE L1 -11 6571 511 1 1051 395 20 0 0 chrX 61146203 61146253 -105504043 - L1Md_F2 LINE L1 -1299 4584 4535 1 1051 12103 110 8 20 chrX 61146245 61146980 -105503316 - L1VL4 LINE L1 -744 2815 2104 1 1051 5258 57 3 3 chrX 61146980 61147646 -105502650 - L1Md_F2 LINE L1 0 6582 5917 1 1051 12103 110 8 20 chrX 61147646 61148836 -105501460 - L1VL4 LINE L1 -1456 2103 908 1 1051 221 0 0 33 chrX 61148836 61148866 -105501430 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1051 1024 109 0 0 chrX 61148866 61149004 -105501292 - B1_Mus1 SINE Alu -9 139 2 1 1051 12103 110 8 20 chrX 61149004 61149018 -105501278 - L1VL4 LINE L1 -2652 907 898 1 1051 342 0 0 0 chrX 61149018 61149056 -105501240 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1 1051 12103 169 6 9 chrX 61149056 61149925 -105500371 - L1VL4 LINE L1 -5405 897 27 1 1051 422 329 39 78 chrX 61151532 61151839 -105498457 + MT2A LTR ERVL 10 304 -229 1 1051 227 27 0 0 chrX 61153196 61153233 -105497063 - Lx LINE L1 -4 6650 6614 1 1051 802 148 0 5 chrX 61153231 61153367 -105496929 + L1_Mm LINE L1 5441 5600 -562 1 1051 23 0 0 0 chrX 61153774 61153797 -105496499 + AT_rich Low_complexity Low_complexity 1 23 0 2 1051 269 332 102 10 chrX 61154553 61154758 -105495538 - L1M3c LINE L1 -4962 1169 950 2 1051 483 235 58 16 chrX 61154979 61155100 -105495196 - RMER5 LTR ERV1 -8 526 401 2 1051 785 339 31 48 chrX 61155239 61155660 -105494636 + BGLII_B LTR ERVK 1 414 -27 2 1051 186 43 0 0 chrX 61155676 61155699 -105494597 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2 1051 5437 88 2 59 chrX 61155701 61156518 -105493778 - L1Md_F2 LINE L1 -11 6571 5801 2 1051 270 56 0 0 chrX 61156884 61156920 -105493376 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1051 253 270 22 22 chrX 61161052 61161143 -105489153 + RMER4A LTR ERVK 10 100 -366 2 1051 405 0 0 0 chrX 61161625 61161670 -105488626 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 2 1051 6078 159 52 8 chrX 61162519 61164129 -105486167 - Lx LINE L1 -3 6651 4987 2 1051 24444 58 2 5 chrX 61164132 61168733 -105481563 - L1Md_F2 LINE L1 0 6582 1993 2 1051 13173 156 28 28 chrX 61168746 61172078 -105478218 - L1VL2 LINE L1 -433 3182 9 2 1051 180 0 0 0 chrX 61172125 61172145 -105478151 + (TC)n Simple_repeat Simple_repeat 2 21 0 2 1051 460 305 21 7 chrX 61173101 61173243 -105477053 + MIRb SINE MIR 74 217 -51 2 1051 378 0 0 0 chrX 61173261 61173303 -105476993 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1051 584 96 0 0 chrX 61176358 61176441 -105473855 - Lx2B LINE L1 -311 6689 6607 2 1051 1519 161 26 64 chrX 61176439 61176751 -105473545 + Lx2B LINE L1 6669 6968 -32 2 1051 459 0 0 0 chrX 61176753 61176804 -105473492 + (TAAAA)n Simple_repeat Simple_repeat 3 53 0 2 1051 26 0 0 0 chrX 61177226 61177252 -105473044 + AT_rich Low_complexity Low_complexity 1 26 0 2 1051 190 367 0 0 chrX 61177669 61177748 -105472548 + MIR SINE MIR 112 190 -72 2 1051 361 309 101 34 chrX 61178635 61178843 -105471453 + L1MC LINE L1 5281 5502 -831 2 1051 38013 39 5 8 chrX 61179135 61185327 -105464969 - L1Md_A LINE L1 0 6582 415 2 1051 39 50 0 0 chrX 61185334 61185394 -105464902 + AT_rich Low_complexity Low_complexity 1 60 0 2 1051 5332 56 3 7 chrX 61185394 61186076 -105464220 - L1Md_F2 LINE L1 -3 6579 5901 2 1051 5002 110 33 4 chrX 61186077 61186826 -105463470 - Lx3_Mus LINE L1 -9 7000 6230 2 1051 1495 73 0 0 chrX 61186924 61187115 -105463181 - B2_Mm1t SINE B2 -2 191 1 2 1051 1424 206 188 8 chrX 61187523 61187880 -105462416 - MTC LTR MaLR 0 421 1 2 1051 727 315 14 0 chrX 61188299 61188512 -105461784 + B3 SINE B2 1 216 0 2 1051 495 87 0 0 chrX 61188945 61189014 -105461282 + (TA)n Simple_repeat Simple_repeat 1 69 0 2 1051 384 22 0 0 chrX 61189265 61189310 -105460986 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1051 351 65 0 0 chrX 61189340 61189386 -105460910 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1051 283 354 18 9 chrX 61189564 61189678 -105460618 - B4 SINE B4 -168 124 10 2 1051 1029 245 8 12 chrX 61189809 61190141 -105460155 + MT2A LTR ERVL 84 461 -72 2 1051 405 0 0 0 chrX 61190141 61190186 -105460110 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 2 1051 683 273 5 19 chrX 61190186 61190253 -105460043 + MT2A LTR ERVL 462 527 -6 2 1051 387 0 0 0 chrX 61190285 61190328 -105459968 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1051 284 397 77 19 chrX 61191088 61191508 -105458788 + L2a LINE L2 2776 3216 -210 2 1051 646 66 0 0 chrX 61191508 61191599 -105458697 - L1_Mus2 LINE L1 0 6566 6476 2 1051 284 390 105 16 chrX 61191599 61191708 -105458588 + L2a LINE L2 3217 3340 -86 2 1051 29 47 0 0 chrX 61191969 61192012 -105458284 + AT_rich Low_complexity Low_complexity 1 43 0 2 1051 4895 126 4 13 chrX 61192362 61193147 -105457149 + L1_Mur1 LINE L1 5098 5875 -11 2 1051 1665 135 18 7 chrX 61193145 61193421 -105456875 - Lx3A LINE L1 -302 6679 6401 2 1051 1673 159 27 3 chrX 61193421 61193718 -105456578 + Lx3A LINE L1 6675 6978 -3 2 1051 223 127 0 68 chrX 61193911 61193970 -105456326 + T-rich Low_complexity Low_complexity 2 56 0 2 1051 402 343 36 0 chrX 61194154 61194291 -105456005 - MLT1E1A LTR MaLR -192 488 347 2 1051 3466 124 6 4 chrX 61194301 61194828 -105455468 - L1_Mm LINE L1 -97 5786 5259 2 1051 3153 184 69 17 chrX 61194970 61195698 -105454598 + L1Md_F LINE L1 412 1139 -5380 2 1051 4324 109 6 6 chrX 61195667 61196350 -105453946 + MusHAL1 LINE L1 4 686 -2026 2 1051 3295 94 26 0 chrX 61196334 61196800 -105453496 + L1_Mus2 LINE L1 6027 6504 -62 2 1051 242 172 35 0 chrX 61197367 61197425 -105452871 + A-rich Low_complexity Low_complexity 3 62 0 2 1051 311 221 0 23 chrX 61197769 61197857 -105452439 - Lx3B LINE L1 -1 6972 6887 2 1051 435 158 0 50 chrX 61198213 61198293 -105452003 + ORR1C2 LTR MaLR 3 78 -306 2 1051 3454 183 99 17 chrX 61198297 61199057 -105451239 + RLTR25B LTR ERVK 1 897 -206 2 1051 35417 35 0 0 chrX 61199129 61204748 -105445548 + L1Md_T LINE L1 1 5589 -297 2 1051 9005 4 0 0 chrX 61204748 61205744 -105444552 + L1Md_T LINE L1 5590 6585 0 2 1051 186 43 0 0 chrX 61205826 61205849 -105444447 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2 1051 678 193 31 62 chrX 61205867 61206027 -105444269 + RLTR25B LTR ERVK 874 1028 0 2 1051 1321 205 42 42 chrX 61206030 61206336 -105443960 + ORR1C2 LTR MaLR 79 384 0 2 1051 22 35 0 0 chrX 61206356 61206385 -105443911 + AT_rich Low_complexity Low_complexity 1 29 0 2 1051 290 368 64 0 chrX 61206597 61206722 -105443574 + Charlie1a DNA MER1_type 2 134 -1321 2 1051 275 317 65 42 chrX 61206742 61206910 -105443386 + Charlie1a DNA MER1_type 254 425 -1030 2 1051 1103 95 7 0 chrX 61207110 61207257 -105443039 - B1_Mus1 SINE Alu 0 148 1 2 1051 1274 228 112 0 chrX 61207258 61207614 -105442682 - Lx9 LINE L1 -34 7610 7215 2 1051 1157 223 12 0 chrX 61207624 61207866 -105442430 - L1_Rod LINE L1 -7 5840 5596 2 1051 323 313 60 13 chrX 61207867 61208100 -105442196 + Charlie1a DNA MER1_type 1209 1452 -3 2 1051 597 351 101 23 chrX 61208107 61208477 -105441819 + MER44B DNA MER2_type 2 402 -148 2 1051 275 349 0 0 chrX 61208477 61208563 -105441733 + MTE2b LTR MaLR 2 87 -292 2 1051 983 320 85 47 chrX 61208579 61209025 -105441271 + MT2A LTR ERVL 63 525 -8 2 1051 232 27 26 26 chrX 61209440 61209478 -105440818 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2 1051 1044 92 0 14 chrX 61209478 61209613 -105440683 - B1_Mus2 SINE Alu -8 139 5 2 131 589 309 44 0 chrX 61210489 61210693 -105439603 - B3 SINE B2 0 216 4 2 1052 22 56 0 0 chrX 61211457 61211493 -105438803 + AT_rich Low_complexity Low_complexity 1 36 0 2 1052 543 325 43 93 chrX 61211781 61212157 -105438139 - MT2A LTR ERVL -74 459 103 2 1052 240 35 0 0 chrX 61212209 61212238 -105438058 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 2 1052 3003 34 0 0 chrX 61212242 61212599 -105437697 - L1Md_F2 LINE L1 -14 6568 6212 2 1052 294 284 12 24 chrX 61212600 61212683 -105437613 - MTEa LTR MaLR -279 100 19 2 1052 732 303 0 94 chrX 61212728 61212961 -105437335 + ID_B1 SINE B4 8 218 -6 2 1052 661 272 49 15 chrX 61215037 61215242 -105435054 - B3 SINE B2 -4 212 1 2 1052 969 316 7 7 chrX 61215328 61215615 -105434681 + Lx8 LINE L1 6523 6809 -664 2 1052 189 0 0 0 chrX 61215848 61215869 -105434427 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1052 241 323 86 0 chrX 61217828 61217921 -105432375 + MLT2D LTR ERVL 33 133 -281 2 1052 622 246 8 8 chrX 61218476 61218607 -105431689 - B3 SINE B2 -85 131 1 2 1052 399 368 96 0 chrX 61218843 61218979 -105431317 - RSINE1 SINE B4 -15 150 2 2 1052 258 282 0 14 chrX 61219335 61219407 -105430889 + PB1D10 SINE Alu 6 76 -41 2 1052 1121 351 18 18 chrX 61219460 61220022 -105430274 - Lx8 LINE L1 -623 6850 6289 2 1052 3213 136 50 44 chrX 61220172 61220455 -105429841 + RLTR22_Mur LTR ERVK 1 310 -1538 2 1052 1122 126 44 0 chrX 61220455 61220637 -105429659 + B2_Mm2 SINE B2 1 190 -5 2 1052 3213 136 50 44 chrX 61220637 61220947 -105429349 + RLTR22_Mur LTR ERVK 311 598 -1250 2 1052 31648 107 11 3 chrX 61221276 61227385 -105422911 - L1Md_F2 LINE L1 0 6582 424 2 1052 2597 116 52 74 chrX 61227386 61227888 -105422408 + RLTR22_Mur LTR ERVK 578 1068 -780 2 1052 6542 83 13 1 chrX 61227889 61228070 -105422226 - L1Md_F LINE L1 -3721 2162 1982 2 1052 234 0 0 0 chrX 61228070 61228096 -105422200 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2 1052 6542 116 63 2 chrX 61228096 61229947 -105420349 - L1Md_F LINE L1 -3902 1981 184 2 1052 4017 122 20 128 chrX 61229951 61230751 -105419545 + RLTR22_Mur LTR ERVK 1135 1848 0 2 1052 409 310 14 20 chrX 61230759 61230907 -105419389 - Lx8 LINE L1 -104 7369 7223 2 1052 1135 259 63 31 chrX 61230959 61231341 -105418955 + RMER1C Other Other 948 1341 -1 2 1052 1527 360 43 37 chrX 61231346 61232313 -105417983 - Lx8 LINE L1 -235 7238 6266 2 1052 1807 251 24 15 chrX 61232478 61232935 -105417361 + Lx9 LINE L1 6842 7302 -342 2 1052 576 29 0 0 chrX 61232979 61233049 -105417247 + (TCTA)n Simple_repeat Simple_repeat 2 71 0 2 1052 1803 195 33 3 chrX 61233106 61233441 -105416855 + ORR1B2 LTR MaLR 9 353 -14 2 1052 2683 90 2 66 chrX 61233442 61233868 -105416428 + MTB_Mm LTR MaLR 1 399 -8 2 1052 447 92 0 0 chrX 61233869 61233934 -105416362 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 1052 505 187 8 16 chrX 61233934 61234059 -105416237 + Lx9 LINE L1 7518 7641 -3 2 1052 1025 184 21 0 chrX 61234068 61234258 -105416038 + B2_Mm2 SINE B2 2 195 0 2 1052 22 0 0 0 chrX 61234261 61234283 -105416013 + AT_rich Low_complexity Low_complexity 1 22 0 2 1052 23 0 0 0 chrX 61234288 61234311 -105415985 + AT_rich Low_complexity Low_complexity 1 23 0 2 1052 396 0 0 0 chrX 61234494 61234538 -105415758 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1052 919 251 10 0 chrX 61234695 61234902 -105415394 + B3 SINE B2 3 211 -5 2 1052 4766 73 3 14 chrX 61234972 61235626 -105414670 - L1_Mus1 LINE L1 0 6567 5921 2 1052 293 266 124 14 chrX 61235626 61235771 -105414525 + L1MC LINE L1 5143 5303 -843 2 1052 225 250 0 0 chrX 61236366 61236458 -105413838 + (TA)n Simple_repeat Simple_repeat 2 93 0 2 1052 543 31 0 0 chrX 61237036 61237101 -105413195 + (CA)n Simple_repeat Simple_repeat 1 65 0 2 1052 811 73 195 0 chrX 61237436 61237559 -105412737 + B1_Mus2 SINE Alu 1 147 0 2 1052 366 23 0 0 chrX 61237559 61237602 -105412694 + (A)n Simple_repeat Simple_repeat 1 43 0 2 1052 1789 208 66 40 chrX 61237818 61238188 -105412108 + RLTR18 LTR ERVK 180 563 -53 2 1052 1018 120 0 0 chrX 61238188 61238330 -105411966 - B1_Mus1 SINE Alu -5 143 2 3 1052 1789 208 66 40 chrX 61238330 61238385 -105411911 + RLTR18 LTR ERVK 564 616 0 2 1052 912 316 66 3 chrX 61238710 61239028 -105411268 + MTE2b LTR MaLR 1 338 -41 3 1052 198 207 0 47 chrX 61239207 61239293 -105411003 + GA-rich Low_complexity Low_complexity 6 87 0 3 1052 239 377 85 27 chrX 61240205 61240393 -105409903 + ID_B1 SINE B4 26 224 0 3 1052 201 238 0 0 chrX 61240445 61240465 -105409831 + (CATATA)n Simple_repeat Simple_repeat 1 20 0 3 1052 603 74 0 0 chrX 61240465 61240546 -105409750 + (TG)n Simple_repeat Simple_repeat 2 82 0 3 1052 201 238 0 0 chrX 61240546 61240567 -105409729 + (CATATA)n Simple_repeat Simple_repeat 3 23 0 3 1052 847 203 107 0 chrX 61240569 61240746 -105409550 - RCHARR1 DNA MER1_type -216 758 563 3 1052 180 0 0 0 chrX 61241225 61241245 -105409051 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1052 2910 187 57 10 chrX 61241879 61242470 -105407826 - RLTR17 LTR ERVK -61 631 1 3 1052 431 320 8 0 chrX 61244291 61244416 -105405880 + Lx5 LINE L1 6238 6363 -687 3 1052 1141 336 72 45 chrX 61244413 61244952 -105405344 + Lx5 LINE L1 6479 7032 -18 3 1052 199 259 176 0 chrX 61245023 61245108 -105405188 + L2c LINE L2 3210 3309 -78 3 1052 2194 311 67 50 chrX 61245950 61247218 -105403078 + Lx9 LINE L1 6143 7431 -213 3 1052 29 90 0 0 chrX 61247318 61247396 -105402900 + AT_rich Low_complexity Low_complexity 1 78 0 3 1052 22 56 0 0 chrX 61248037 61248073 -105402223 + AT_rich Low_complexity Low_complexity 1 36 0 3 1052 6433 147 36 11 chrX 61248170 61249319 -105400977 + Lx3A LINE L1 5798 6974 -7 3 1052 226 264 11 22 chrX 61249323 61249412 -105400884 + A-rich Low_complexity Low_complexity 3 90 0 3 1052 246 269 20 61 chrX 61249417 61249516 -105400780 + PB1D7 SINE Alu 12 106 -14 3 1052 205 204 20 0 chrX 61250158 61250207 -105400089 + (TTG)n Simple_repeat Simple_repeat 2 51 0 3 1052 201 39 0 0 chrX 61250232 61250258 -105400038 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 1052 207 88 0 0 chrX 61250401 61250435 -105399861 + (T)n Simple_repeat Simple_repeat 1 34 0 3 1052 309 353 35 74 chrX 61250435 61250637 -105399659 + MIRb SINE MIR 60 253 -15 3 1052 257 301 40 81 chrX 61250758 61250906 -105399390 + MIRb SINE MIR 127 268 0 3 1052 243 282 0 40 chrX 61251112 61251186 -105399110 + RMER15 LTR ERVL 2 72 -503 3 1052 2609 134 4 127 chrX 61251223 61251752 -105398544 + RLTR22_Mur LTR ERVK 1 464 -1384 3 1052 31517 76 13 16 chrX 61251758 61252549 -105397747 - L1Md_F2 LINE L1 0 6582 5794 3 1052 1091 71 0 0 chrX 61252549 61252690 -105397606 - B1_Mus2 SINE Alu -6 141 1 3 1052 31517 80 1 85 chrX 61252690 61256863 -105393433 - L1Md_F2 LINE L1 -90 5793 1971 3 1052 1860 77 0 26 chrX 61256863 61257131 -105393165 - L1Md_F2 LINE L1 0 6582 6322 3 1052 31517 117 4 59 chrX 61257131 61258629 -105391667 - L1Md_F2 LINE L1 -3913 1970 549 3 1052 8151 121 57 16 chrX 61258634 61259488 -105390808 + RLTR22_Mur LTR ERVK 451 1320 -528 3 1052 435 52 0 0 chrX 61259488 61259546 -105390750 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 1052 8151 121 57 16 chrX 61259546 61260034 -105390262 + RLTR22_Mur LTR ERVK 1321 1847 -1 3 1052 715 282 56 66 chrX 61260039 61260343 -105389953 + RMER15 LTR ERVL 27 327 -248 3 1052 1239 178 9 14 chrX 61260348 61260570 -105389726 - MTC LTR MaLR -4 417 197 3 1052 831 249 117 49 chrX 61260586 61260894 -105389402 - Lx4B LINE L1 -4 7054 6726 3 1052 10702 163 40 37 chrX 61260889 61261943 -105388353 + L1_Mur2 LINE L1 2898 3922 -1955 3 1052 1125 101 0 0 chrX 61261943 61262091 -105388205 + B1_Mus1 SINE Alu 1 148 0 3 1052 10702 163 40 37 chrX 61262091 61263304 -105386992 + L1_Mur2 LINE L1 3923 5172 -705 3 1052 282 29 0 0 chrX 61263434 61263469 -105386827 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1052 831 233 0 28 chrX 61263470 61263647 -105386649 - MT2A LTR ERVL -361 172 1 3 1052 382 250 47 31 chrX 61263650 61263778 -105386518 + RMER15 LTR ERVL 445 574 -1 3 1052 5234 157 63 20 chrX 61263800 61264781 -105385515 + RLTR13D2 LTR ERVK 1 1023 0 3 1052 22 35 0 0 chrX 61264940 61264969 -105385327 + AT_rich Low_complexity Low_complexity 1 29 0 3 1052 7171 88 8 2 chrX 61265430 61266844 -105383452 + L1_Mus1 LINE L1 5145 6566 -1 3 1052 2230 194 45 14 chrX 61269619 61270132 -105380164 - RLTR24 LTR ERV1 0 529 1 3 1052 772 325 78 30 chrX 61270133 61270466 -105379830 - ORR1D2 LTR MaLR -19 351 3 3 1052 2488 283 41 65 chrX 61270469 61271301 -105378995 - ORR1D2-int LTR MaLR -1 1369 558 3 1052 5770 121 62 13 chrX 61271341 61272427 -105377869 + Lx3_Mus LINE L1 5691 6888 -121 3 1052 394 297 10 19 chrX 61273291 61273394 -105376902 - PB1D10 SINE Alu -15 102 1 3 1052 411 245 29 83 chrX 61273495 61273700 -105376596 + L1MA5 LINE L1 6054 6247 -53 3 1052 225 0 0 0 chrX 61273810 61273835 -105376461 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1052 339 366 75 25 chrX 61274208 61274407 -105375889 + MER63A DNA AcHobo 1 209 -1 3 1052 191 250 38 19 chrX 61275571 61275624 -105374672 - MIRc SINE MIR -114 154 101 3 1052 285 237 0 26 chrX 61275634 61275712 -105374584 + Lx7 LINE L1 7605 7680 -16 3 1052 1685 198 85 8 chrX 61277336 61277702 -105372594 - ORR1B1 LTR MaLR 0 394 1 3 1052 1875 189 60 57 chrX 61277730 61278150 -105372146 - MTC LTR MaLR 0 421 1 3 1052 199 286 0 0 chrX 61278182 61278231 -105372065 + MIRc SINE MIR 123 171 -97 3 1052 183 93 45 23 chrX 61278488 61278532 -105371764 + (TAA)n Simple_repeat Simple_repeat 1 45 0 3 1052 251 306 16 0 chrX 61279060 61279122 -105371174 + PB1D10 SINE Alu 30 92 -25 3 1052 433 328 40 45 chrX 61280792 61280993 -105369303 + MER2 DNA MER2_type 100 299 -46 3 1052 1005 275 46 8 chrX 61280993 61281253 -105369043 + Lx6 LINE L1 7175 7444 -16 3 1052 262 317 97 26 chrX 61282567 61282725 -105367571 + MIRb SINE MIR 2 165 -43 3 1052 213 159 0 0 chrX 61282880 61282924 -105367372 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1052 4850 60 0 11 chrX 61283167 61283794 -105366502 - L1Md_F2 LINE L1 0 6582 5963 3 1052 40125 19 2 6 chrX 61283794 61290203 -105360093 - L1Md_A LINE L1 -1 6581 200 3 1052 4856 113 72 8 chrX 61291263 61292639 -105357657 - L1_Mus2 LINE L1 0 6566 5140 3 1052 180 97 0 0 chrX 61292639 61292670 -105357626 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1052 33271 62 2 50 chrX 61292675 61296187 -105354109 - L1Md_T LINE L1 0 6582 3196 3 1052 375 179 46 35 chrX 61296187 61296274 -105354022 - ORR1A3-int LTR MaLR -1323 640 553 3 1052 33271 62 2 50 chrX 61296274 61298337 -105351959 - L1Md_T LINE L1 0 3195 1205 3 1052 4879 134 66 16 chrX 61298305 61299134 -105351162 - L1Md_F LINE L1 -5380 1139 269 3 1052 22 70 0 0 chrX 61299565 61299608 -105350688 + AT_rich Low_complexity Low_complexity 1 43 0 3 1052 418 212 0 25 chrX 61299798 61299919 -105350377 + C-rich Low_complexity Low_complexity 6 123 0 3 1052 864 145 0 0 chrX 61299893 61300038 -105350258 + (TTC)n Simple_repeat Simple_repeat 2 146 0 3 1052 192 238 0 0 chrX 61300837 61300900 -105349396 + CT-rich Low_complexity Low_complexity 1 63 0 3 1052 374 205 7 129 chrX 61301277 61301417 -105348879 - Lx7 LINE L1 0 7696 7574 3 1052 1686 172 10 3 chrX 61301418 61301716 -105348580 + Lx2 LINE L1 6574 6873 -124 3 1052 31 0 0 0 chrX 61301793 61301824 -105348472 + AT_rich Low_complexity Low_complexity 1 31 0 3 1052 5327 88 8 7 chrX 61301882 61302634 -105347662 + RLTR22_Mus LTR ERVK 1 753 -1055 3 1052 3346 148 142 33 chrX 61302634 61303428 -105346868 + RLTR13D2 LTR ERVK 1 1023 0 3 1052 387 222 0 22 chrX 61303428 61303520 -105346776 + RLTR22_Mur LTR ERVK 743 832 -1016 3 1052 1574 126 43 8 chrX 61303747 61304004 -105346292 + RLTR22_Mus LTR ERVK 1543 1808 0 3 1052 24 0 0 0 chrX 61304063 61304087 -105346209 + AT_rich Low_complexity Low_complexity 1 24 0 3 1052 756 218 13 0 chrX 61304088 61304244 -105346052 - Lx4B LINE L1 -47 7011 6854 3 1052 401 115 33 0 chrX 61304244 61304305 -105345991 + ORR1A2 LTR MaLR 1 63 -264 3 1052 3262 152 39 11 chrX 61304277 61304849 -105345447 + ORR1A2-int LTR MaLR 1376 1963 0 3 1052 2072 114 6 87 chrX 61304849 61305205 -105345091 + ORR1A2 LTR MaLR 1 327 0 3 1052 4010 175 7 9 chrX 61305205 61305895 -105344401 - Lx4B LINE L1 -200 6858 6170 3 1052 3329 178 27 19 chrX 61305906 61306532 -105343764 + RLTR17 LTR ERVK 62 692 0 3 1052 554 145 158 2 chrX 61306532 61306680 -105343616 + ORR1A3 LTR MaLR 141 307 -60 3 1052 2901 126 19 7 chrX 61306682 61307147 -105343149 - Lx4B LINE L1 -935 6123 5653 3 1052 473 156 10 0 chrX 61307144 61307240 -105343056 + L1_Mur2 LINE L1 3899 3995 -1882 3 1052 1214 157 17 13 chrX 61307228 61307460 -105342836 + L1_Mur2 LINE L1 4353 4585 -1292 3 1052 644 182 0 7 chrX 61308195 61308333 -105341963 + GA-rich Low_complexity Low_complexity 2 138 0 3 1052 351 0 0 0 chrX 61308968 61309007 -105341289 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1052 306 0 0 0 chrX 61309079 61309113 -105341183 + (TAA)n Simple_repeat Simple_repeat 3 36 0 3 1052 591 318 48 58 chrX 61310963 61311257 -105339039 - B4A SINE B4 0 292 2 3 1052 5472 55 3 0 chrX 61312234 61312920 -105337376 - L1Md_F2 LINE L1 -2 6580 5893 3 1052 603 248 91 9 chrX 61313819 61314121 -105336175 - L1MA7 LINE L1 -2 6298 5961 3 1052 209 57 0 28 chrX 61314773 61314809 -105335487 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 1052 1023 269 62 56 chrX 61314836 61314895 -105335401 - MTD LTR MaLR 0 419 362 3 1052 2796 58 0 0 chrX 61314895 61315241 -105335055 + ORR1A1 LTR MaLR 1 346 0 3 1052 1023 269 62 56 chrX 61315241 61315536 -105334760 - MTD LTR MaLR -58 361 63 3 1052 5566 121 24 7 chrX 61315805 61316664 -105333632 + Lx LINE L1 5781 6654 0 3 1052 225 309 0 0 chrX 61316676 61316744 -105333552 - L2a LINE L2 -1 3425 3358 3 1052 21 0 0 0 chrX 61316839 61316860 -105333436 + AT_rich Low_complexity Low_complexity 1 21 0 3 1052 351 44 0 0 chrX 61318250 61318295 -105332001 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1052 5252 67 1 6 chrX 61318483 61319170 -105331126 - L1Md_F2 LINE L1 -12 6570 5887 3 1052 1755 223 52 35 chrX 61319333 61319733 -105330563 + MTC LTR MaLR 1 407 -14 3 1052 527 29 14 0 chrX 61320700 61320769 -105329527 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 3 1052 935 238 24 66 chrX 61320770 61321058 -105329238 + ORR1D1 LTR MaLR 95 370 -4 3 1052 757 323 41 6 chrX 61322060 61322399 -105327897 + RMER5 LTR ERV1 160 510 -24 3 1052 373 344 30 22 chrX 61322982 61323116 -105327180 - L2 LINE L2 -669 2750 2616 3 1052 328 275 0 0 chrX 61323350 61323430 -105326866 + MTEa LTR MaLR 1 80 -299 3 1052 460 344 8 16 chrX 61323545 61323672 -105326624 + B3 SINE B2 47 172 -44 3 1052 450 0 0 0 chrX 61323673 61323723 -105326573 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 1052 243 0 0 0 chrX 61323723 61323749 -105326547 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 1052 7942 27 14 0 chrX 61323761 61324677 -105325619 - RLTR13B3 LTR ERVK 0 929 1 4 1052 718 284 14 19 chrX 61324680 61324892 -105325404 + MTEa LTR MaLR 166 376 -3 3 1052 1204 34 7 0 chrX 61325219 61325365 -105324931 - B1_Mm SINE Alu 0 147 1 4 1052 6051 25 6 0 chrX 61325754 61326462 -105323834 - L1Md_A LINE L1 -2 6580 5869 4 1052 23 33 0 0 chrX 61327533 61327563 -105322733 + AT_rich Low_complexity Low_complexity 1 30 0 4 1052 283 39 78 0 chrX 61327869 61327920 -105322376 + (TTTTTG)n Simple_repeat Simple_repeat 6 60 0 4 1052 510 31 0 0 chrX 61328076 61328140 -105322156 + (TC)n Simple_repeat Simple_repeat 1 64 0 4 1052 7155 120 4 45 chrX 61329324 61330971 -105319325 - Lx3B LINE L1 -626 6347 4769 4 1052 3507 158 3 19 chrX 61330973 61331591 -105318705 + Lx3B LINE L1 6362 6969 -4 4 1052 1074 224 101 12 chrX 61332850 61333098 -105317198 + Lx5 LINE L1 6768 7037 -13 4 1052 375 23 0 0 chrX 61333099 61333143 -105317153 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 4 1052 722 253 20 75 chrX 61333447 61333648 -105316648 - RMER30 DNA MER1_type -11 191 2 4 1052 855 157 0 0 chrX 61335171 61335305 -105314991 + B1_Mus1 SINE Alu 1 134 -14 4 1052 279 79 0 0 chrX 61335309 61335347 -105314949 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 4 1052 881 144 63 46 chrX 61335379 61335553 -105314743 + B2_Mm2 SINE B2 4 180 -15 4 1052 25 31 0 0 chrX 61336064 61336096 -105314200 + AT_rich Low_complexity Low_complexity 1 32 0 4 1052 1037 189 48 72 chrX 61336112 61336403 -105313893 + L1_Mus3 LINE L1 3 286 -6698 4 131 23777 117 11 72 chrX 61336399 61341797 -105308499 + L1_Mus3 LINE L1 1593 6635 -3 4 1053 8562 101 41 16 chrX 61341828 61343496 -105306800 + Lx3_Mus LINE L1 5297 7009 0 4 1053 186 186 23 23 chrX 61344250 61344294 -105306002 + MIRc SINE MIR 20 63 -205 4 1053 1705 295 59 32 chrX 61344499 61344730 -105305566 + Lx8 LINE L1 6828 7074 -399 4 1053 216 86 0 0 chrX 61344730 61344765 -105305531 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 1053 1705 295 59 32 chrX 61344765 61345109 -105305187 + Lx8 LINE L1 7075 7422 -51 4 1053 1110 95 0 0 chrX 61345109 61345288 -105305008 + (GA)n Simple_repeat Simple_repeat 2 180 0 4 1053 1705 295 59 32 chrX 61345288 61345337 -105304959 + Lx8 LINE L1 7423 7469 -4 4 1053 477 0 0 0 chrX 61345508 61345561 -105304735 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 4 1053 360 0 0 0 chrX 61345649 61345689 -105304607 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1053 510 293 16 0 chrX 61345704 61345827 -105304469 + B4 SINE B4 166 290 -2 4 1053 180 0 0 0 chrX 61345931 61345951 -105304345 + (TAA)n Simple_repeat Simple_repeat 2 21 0 4 1053 258 327 35 88 chrX 61346587 61346778 -105303518 - MIRc SINE MIR -68 200 12 4 1053 188 289 0 0 chrX 61347699 61347751 -105302545 - MIR3 SINE MIR -6 202 151 4 1053 934 316 128 27 chrX 61348272 61349041 -105301255 + Lx8 LINE L1 6627 7473 0 4 1053 225 268 27 27 chrX 61349563 61349636 -105300660 - MER5A1 DNA MER1_type 0 166 94 4 1053 1446 0 6 11 chrX 61349829 61350005 -105300291 + (GAA)n Simple_repeat Simple_repeat 2 176 0 4 1053 353 340 234 5 chrX 61350288 61350655 -105299641 + L2 LINE L2 2309 2759 -660 4 1053 427 358 51 9 chrX 61350729 61350943 -105299353 - MIR SINE MIR 0 262 40 4 1053 499 369 31 5 chrX 61351879 61352102 -105298194 + L2 LINE L2 2283 2511 -908 4 1053 696 347 53 21 chrX 61352110 61352487 -105297809 + L2 LINE L2 2635 3023 -396 4 1053 272 192 27 0 chrX 61352487 61352560 -105297736 + (TATG)n Simple_repeat Simple_repeat 2 76 0 4 1053 192 40 0 0 chrX 61353370 61353395 -105296901 + (TC)n Simple_repeat Simple_repeat 2 26 0 4 1053 329 43 21 0 chrX 61353395 61353441 -105296855 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 1053 1065 93 7 0 chrX 61353474 61353614 -105296682 + B1_Mus2 SINE Alu 1 141 -6 4 1053 210 37 0 0 chrX 61353615 61353642 -105296654 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 4 1053 532 343 6 6 chrX 61353972 61354151 -105296145 - B3A SINE B2 -15 183 5 4 1053 411 308 135 30 chrX 61354171 61354944 -105295352 - L1_Mur3 LINE L1 -2075 3805 2992 4 1053 888 259 182 16 chrX 61355462 61355780 -105294516 - ORR1D1 LTR MaLR -3 371 1 4 1053 4289 89 5 2 chrX 61355839 61356436 -105293860 + L1Md_F2 LINE L1 4988 5586 -297 4 1053 7301 89 2 1 chrX 61356436 61357429 -105292867 + L1Md_F2 LINE L1 5587 6580 -2 4 1053 335 375 15 15 chrX 61357524 61357654 -105292642 + B4A SINE B4 43 172 -120 4 1053 552 30 0 0 chrX 61357684 61357750 -105292546 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 1053 1823 242 5 43 chrX 61358026 61358449 -105291847 - MTD LTR MaLR 0 419 13 4 1053 195 69 0 0 chrX 61358449 61358478 -105291818 + (A)n Simple_repeat Simple_repeat 1 29 0 4 1053 327 266 130 119 chrX 61358704 61359298 -105290998 - L1MCa LINE L1 -4726 1782 1183 4 1053 604 338 65 77 chrX 61359324 61359480 -105290816 - L1MCa LINE L1 -5596 912 756 4 1053 975 149 0 0 chrX 61359480 61359621 -105290675 + B1_Mus1 SINE Alu 1 141 -7 4 1053 604 338 65 77 chrX 61359621 61359650 -105290646 - L1MCa LINE L1 -5753 755 749 4 1053 504 0 0 0 chrX 61359650 61359706 -105290590 + (GAA)n Simple_repeat Simple_repeat 2 57 0 4 1053 604 338 65 77 chrX 61359706 61360092 -105290204 - L1MCa LINE L1 -5760 748 347 4 1053 33105 93 11 5 chrX 61360158 61366309 -105283987 - L1Md_F2 LINE L1 -12 6570 382 4 1053 216 325 23 46 chrX 61367422 61367509 -105282787 + MIR3 SINE MIR 118 202 -6 4 1053 15801 153 50 19 chrX 61367799 61373855 -105276441 - L1Md_F2 LINE L1 -2 6580 235 4 1053 470 350 11 11 chrX 61374149 61374334 -105275962 + MIR SINE MIR 73 257 -5 4 1053 423 274 85 45 chrX 61374815 61375014 -105275282 + B3 SINE B2 2 208 -8 4 1053 189 102 82 0 chrX 61375218 61375267 -105275029 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 4 1053 745 302 18 41 chrX 61375432 61375653 -105274643 - B3 SINE B2 0 216 1 4 1053 204 345 74 61 chrX 61377027 61377073 -105273223 + MIRb SINE MIR 117 160 -108 4 1053 794 106 0 8 chrX 61377073 61377197 -105273099 + (GAAA)n Simple_repeat Simple_repeat 2 124 0 4 1053 204 345 74 61 chrX 61377197 61377298 -105272998 + MIRb SINE MIR 161 266 -2 4 1053 2643 50 0 0 chrX 61378092 61378415 -105271881 + L1Md_F2 LINE L1 6241 6563 -19 4 1053 324 0 0 0 chrX 61378415 61378451 -105271845 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 1053 1056 42 21 0 chrX 61378870 61379014 -105271282 + L1Md_F3 LINE L1 6438 6584 0 4 1053 35300 36 0 0 chrX 61379156 61384388 -105265908 + L1Md_T LINE L1 261 5589 -297 4 1053 8960 6 0 0 chrX 61384388 61385415 -105264881 + L1Md_T LINE L1 5590 6585 0 4 1053 373 413 42 5 chrX 61385867 61386057 -105264239 + LTR16A LTR ERVL 146 342 -109 4 1053 589 282 40 50 chrX 61386496 61386939 -105263357 - L1MB5 LINE L1 -9 6663 6372 4 1053 242 245 30 50 chrX 61386964 61387063 -105263233 - L1MB5 LINE L1 -4167 2664 2568 4 1053 14299 96 51 4 chrX 61387054 61388602 -105261694 - MusHAL1 LINE L1 -4 2708 1122 4 1053 540 0 0 0 chrX 61388602 61388662 -105261634 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 1053 13553 95 51 4 chrX 61388662 61389628 -105260668 - MusHAL1 LINE L1 -1591 1121 87 4 1053 7034 85 26 41 chrX 61389628 61390667 -105259629 - RLTR13D5 LTR ERVK 0 1023 1 4 1053 4698 135 0 5 chrX 61390667 61391427 -105258869 - L1VL4 LINE L1 -5364 938 183 4 1053 254 316 0 25 chrX 61391665 61391746 -105258550 - Lx7 LINE L1 -2015 5681 5603 4 1053 300 146 36 0 chrX 61391749 61391804 -105258492 + MT2A LTR ERVL 1 57 -476 4 1053 1332 184 84 39 chrX 61391804 61392147 -105258149 + RMER16 LTR ERVK 1 533 0 4 1053 829 268 19 126 chrX 61392147 61392471 -105257825 + MT2A LTR ERVL 52 340 -193 4 1053 203 88 29 0 chrX 61392497 61392531 -105257765 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1053 318 307 41 55 chrX 61392605 61392750 -105257546 - B1_Mus1 SINE Alu 0 148 6 4 1053 510 321 41 20 chrX 61392787 61393032 -105257264 - Lx8 LINE L1 -2 7471 7222 4 1053 2359 174 82 8 chrX 61393032 61393508 -105256788 - RLTR11A LTR ERVK 0 528 18 4 1053 280 262 49 0 chrX 61393517 61393578 -105256718 - Lx8 LINE L1 -238 7235 7172 4 1053 339 346 0 0 chrX 61393821 61393925 -105256371 + Lx8 LINE L1 6195 6298 -1175 4 1053 511 314 103 61 chrX 61394051 61394478 -105255818 - L1MB5 LINE L1 -5459 1083 639 4 1053 2970 27 0 5 chrX 61394997 61395366 -105254930 + L1Md_F2 LINE L1 5220 5586 -297 4 1053 7906 50 8 1 chrX 61395366 61396343 -105253953 + L1Md_F2 LINE L1 5587 6570 -12 4 1053 535 177 184 0 chrX 61396347 61396488 -105253808 + Lx7 LINE L1 4113 4279 -1598 4 1053 5094 242 62 19 chrX 61396545 61399156 -105251140 + Lx7 LINE L1 4632 7363 -333 4 1053 863 194 52 62 chrX 61399165 61399357 -105250939 + ORR1C2 LTR MaLR 1 190 -194 4 1053 427 122 11 11 chrX 61399387 61399478 -105250818 + (TCTCCC)n Simple_repeat Simple_repeat 4 94 0 4 1053 691 211 91 136 chrX 61399485 61399643 -105250653 + ORR1C2 LTR MaLR 175 329 -55 4 1053 2264 77 0 16 chrX 61399643 61399959 -105250337 - L1Md_F2 LINE L1 -13 6569 6259 4 1053 691 211 91 136 chrX 61399959 61400020 -105250276 + ORR1C2 LTR MaLR 330 384 0 4 1053 225 0 0 0 chrX 61400068 61400093 -105250203 + (GA)n Simple_repeat Simple_repeat 1 25 0 4 1053 344 293 45 51 chrX 61402165 61402341 -105247955 + L1MD LINE L1 5581 5755 -487 4 1053 315 352 0 48 chrX 61402410 61402598 -105247698 + CT-rich Low_complexity Low_complexity 2 180 0 4 1053 345 278 0 86 chrX 61402759 61402956 -105247340 + C-rich Low_complexity Low_complexity 1 180 0 4 1053 1223 235 90 51 chrX 61402959 61403156 -105247140 + MTD LTR MaLR 1 193 -226 4 1053 1766 188 40 3 chrX 61403156 61403282 -105247014 + Lx4A LINE L1 6721 6854 -204 4 1053 648 38 0 0 chrX 61403282 61403361 -105246935 + (TTTTG)n Simple_repeat Simple_repeat 2 80 0 4 1053 1766 188 40 3 chrX 61403361 61403560 -105246736 + Lx4A LINE L1 6855 7056 -2 4 1053 1223 235 90 51 chrX 61403560 61403752 -105246544 + MTD LTR MaLR 194 404 -15 4 1053 382 287 45 22 chrX 61403823 61404058 -105246238 + CT-rich Low_complexity Low_complexity 1 240 0 4 1053 201 345 9 17 chrX 61404298 61404413 -105245883 + CT-rich Low_complexity Low_complexity 3 116 0 4 1053 236 301 36 80 chrX 61404558 61404670 -105245626 + RLTR9E LTR ERVK 56 162 -247 4 1053 234 0 0 0 chrX 61405005 61405031 -105245265 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1053 1882 53 0 0 chrX 61406456 61406699 -105243597 - L1_Mus1 LINE L1 -100 6467 6225 4 1053 711 105 8 16 chrX 61406699 61406825 -105243471 + L1Md_F2 LINE L1 6458 6582 0 4 1053 3247 173 42 16 chrX 61407075 61407763 -105242533 - RMER17A LTR ERVK -14 737 32 4 1053 1081 102 0 0 chrX 61408018 61408165 -105242131 + B1_Mus1 SINE Alu 1 147 -1 4 1053 188 100 25 0 chrX 61408180 61408220 -105242076 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 4 1053 3621 61 2 0 chrX 61408978 61409440 -105240856 - L1Md_F2 LINE L1 -1 6581 6119 4 1053 405 214 209 25 chrX 61410630 61410788 -105239508 - RMER15 LTR ERVL -90 485 299 4 1053 277 267 68 80 chrX 61410806 61410969 -105239327 - RMER15 LTR ERVL -414 161 1 4 1053 489 319 97 42 chrX 61411542 61411847 -105238449 - MLT2B4 LTR ERVL -48 519 133 5 1053 843 73 0 0 chrX 61411861 61411985 -105238311 + (TC)n Simple_repeat Simple_repeat 1 124 0 5 1053 645 14 0 0 chrX 61411985 61412058 -105238238 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 1053 297 0 0 0 chrX 61412058 61412090 -105238206 + (GA)n Simple_repeat Simple_repeat 2 34 0 5 1053 303 140 0 0 chrX 61413897 61413947 -105236349 + (A)n Simple_repeat Simple_repeat 1 50 0 5 1053 7776 47 4 1 chrX 61414714 61416034 -105234262 - L1Md_F3 LINE L1 -9 6575 5253 5 1053 352 59 59 0 chrX 61416034 61416085 -105234211 + L1_Mm LINE L1 2811 2864 -3019 5 1053 729 90 52 0 chrX 61416086 61416220 -105234076 + RMER17B LTR ERVK 317 457 -501 5 1053 234 275 89 27 chrX 61417055 61417167 -105233129 + MIRc SINE MIR 44 162 -106 5 1053 228 304 132 42 chrX 61417228 61417417 -105232879 + L2 LINE L2 1896 2101 -1318 5 1053 189 307 169 7 chrX 61417453 61417607 -105232689 - MIR SINE MIR -28 234 56 5 1053 248 176 15 0 chrX 61417775 61417843 -105232453 + (TA)n Simple_repeat Simple_repeat 2 70 0 5 1053 1260 320 36 7 chrX 61417881 61418331 -105231965 + RCHARR1 DNA MER1_type 10 472 -502 5 1053 837 233 181 37 chrX 61418331 61418652 -105231644 + ORR1D2 LTR MaLR 1 367 -3 5 1053 762 320 37 63 chrX 61418655 61419046 -105231250 + ORR1D2-int LTR MaLR 1 390 -1190 5 1053 800 302 150 14 chrX 61419005 61419358 -105230938 - MTD LTR MaLR -16 403 3 5 1053 2451 304 50 66 chrX 61419379 61419690 -105230606 + ORR1D2-int LTR MaLR 330 625 -745 5 1053 1523 87 0 0 chrX 61419690 61419898 -105230398 + L1_Mus2 LINE L1 6359 6566 0 5 1053 2451 304 50 66 chrX 61419898 61420644 -105229652 + ORR1D2-int LTR MaLR 626 1370 0 5 1053 1076 312 25 25 chrX 61420672 61420991 -105229305 + ORR1D2 LTR MaLR 48 366 -4 5 1053 1239 38 6 0 chrX 61421198 61421356 -105228940 - L1Md_A LINE L1 0 6582 6424 5 1053 4135 41 0 57 chrX 61421630 61422174 -105228122 + L1Md_F2 LINE L1 6057 6569 -13 5 1053 5524 31 5 0 chrX 61422186 61422835 -105227461 + L1Md_F3 LINE L1 5933 6584 0 5 1053 180 371 20 10 chrX 61423345 61423443 -105226853 + L2c LINE L2 3284 3382 -5 5 1053 781 252 32 14 chrX 61428027 61428244 -105222052 + URR1B DNA MER1_type 2 222 -3 5 1053 350 100 17 0 chrX 61428820 61428880 -105221416 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 5 1053 1149 75 0 0 chrX 61428892 61429038 -105221258 - B1_Mm SINE Alu 0 147 2 5 1053 189 0 0 0 chrX 61432467 61432488 -105217808 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 5 1053 206 32 0 31 chrX 61432673 61432705 -105217591 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1053 531 323 84 11 chrX 61432757 61432948 -105217348 - B3 SINE B2 -10 206 2 5 1053 4664 72 7 0 chrX 61432960 61433554 -105216742 + L1_Mus1 LINE L1 5969 6566 -1 5 1053 180 158 0 0 chrX 61433558 61433596 -105216700 + A-rich Low_complexity Low_complexity 1 38 0 5 1053 288 70 0 0 chrX 61433993 61434036 -105216260 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 5 1053 934 79 87 0 chrX 61434036 61434163 -105216133 - B1_Mm SINE Alu -9 138 1 5 1053 227 165 18 88 chrX 61435005 61435118 -105215178 + (TATAA)n Simple_repeat Simple_repeat 5 109 0 5 1053 216 170 37 19 chrX 61435131 61435239 -105215057 + (TA)n Simple_repeat Simple_repeat 1 110 0 5 1053 365 176 57 32 chrX 61435283 61435441 -105214855 + (TA)n Simple_repeat Simple_repeat 1 162 0 5 1053 9525 95 8 5 chrX 61435450 61436928 -105213368 - Lx3_Mus LINE L1 -17 6992 5514 5 1053 497 144 49 32 chrX 61436932 61437346 -105212950 + (TA)n Simple_repeat Simple_repeat 1 421 0 5 1053 953 187 131 0 chrX 61437777 61437975 -105212321 - URR1A DNA MER1_type -2 224 1 5 1053 6353 72 5 1 chrX 61439443 61440314 -105209982 + L1_Mus2 LINE L1 5693 6566 0 5 1053 472 340 46 49 chrX 61441095 61441484 -105208812 - Lx8 LINE L1 -598 6875 6488 5 1053 4935 116 38 0 chrX 61441785 61442495 -105207801 - RMER19A LTR ERVK 0 737 1 5 1053 306 280 37 18 chrX 61443161 61443270 -105207026 - L1MEe LINE L1 -4038 816 706 5 1053 267 79 0 0 chrX 61443270 61443308 -105206988 + (TTTC)n Simple_repeat Simple_repeat 2 39 0 5 1053 316 233 10 10 chrX 61443418 61443522 -105206774 + Lx6 LINE L1 7344 7447 -13 5 1053 537 30 0 0 chrX 61443536 61443603 -105206693 + (CATA)n Simple_repeat Simple_repeat 2 68 0 5 1053 261 239 0 27 chrX 61443678 61443751 -105206545 + RMER5 LTR ERV1 48 118 -416 5 1053 213 119 0 0 chrX 61443760 61443802 -105206494 + (TTTTTG)n Simple_repeat Simple_repeat 5 46 0 5 1053 1137 78 0 0 chrX 61443803 61443944 -105206352 - B1_Mm SINE Alu -6 141 1 5 1053 574 324 123 35 chrX 61443950 61444260 -105206036 + RMER5 LTR ERV1 112 448 -86 5 1053 807 251 164 51 chrX 61444267 61444603 -105205693 + ORR1D1 LTR MaLR 1 374 0 5 1053 288 152 0 0 chrX 61444649 61444715 -105205581 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 1053 2327 210 71 24 chrX 61444715 61445261 -105205035 + ORR1D1-int LTR MaLR 55 626 -744 5 1053 1753 170 45 25 chrX 61445429 61445828 -105204468 + RMER17C LTR ERVK 1 407 -3 5 1053 645 142 41 8 chrX 61445830 61445951 -105204345 + RMER17C LTR ERVK 286 410 0 5 1053 1055 197 27 32 chrX 61445952 61446172 -105204124 + RMER17C-int LTR ERVK 1 219 -3019 5 1053 7894 130 50 1 chrX 61446189 61447653 -105202643 - Lx3_Mus LINE L1 -11 6998 5451 5 1053 468 219 43 55 chrX 61447805 61447969 -105202327 + RMER17C-int LTR ERVK 375 536 -2702 5 1053 638 161 24 42 chrX 61447973 61448141 -105202155 + RMER17C LTR ERVK 1 165 -245 5 1053 318 71 161 0 chrX 61448968 61449024 -105201272 + RMER17C-int LTR ERVK 1276 1340 -1898 5 1053 5198 156 117 20 chrX 61449058 61450243 -105200053 + RMER17C-int LTR ERVK 1478 2776 -462 5 1053 405 0 0 0 chrX 61450244 61450289 -105200007 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1053 387 103 35 0 chrX 61450289 61450347 -105199949 + RMER17C-int LTR ERVK 2897 2956 -282 5 1053 2244 92 5 94 chrX 61450352 61450725 -105199571 + RLTR8 LTR ERVK 26 365 0 5 1053 18865 94 16 36 chrX 61450725 61452078 -105198218 + SRV_MM-int LTR ERVK 1 1306 -4861 5 1053 1468 50 0 88 chrX 61452078 61452295 -105198001 - L1_Mus2 LINE L1 -3 6563 6366 5 1053 18865 94 16 36 chrX 61452295 61453148 -105197148 + SRV_MM-int LTR ERVK 1307 2152 -4015 5 1053 7370 72 32 8 chrX 61453148 61454147 -105196149 + RLTR13D5 LTR ERVK 1 1023 0 5 1053 18865 94 16 36 chrX 61454147 61454815 -105195481 + SRV_MM-int LTR ERVK 2153 2817 -3350 5 1053 1923 135 7 7 chrX 61454815 61455106 -105195190 + RLTR13D3 LTR ERVK 1 291 -823 5 1053 16074 82 47 22 chrX 61455106 61457538 -105192758 + SRV_MM-int LTR ERVK 3655 6146 -21 5 1053 252 0 0 0 chrX 61457538 61457566 -105192730 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 5 1053 2109 101 74 79 chrX 61457574 61457940 -105192356 + RLTR8 LTR ERVK 2 365 0 5 1053 1057 121 12 0 chrX 61457940 61458105 -105192191 + RMER17C-int LTR ERVK 2951 3117 -121 5 1053 229 247 33 56 chrX 61458105 61458195 -105192101 + RMER4B LTR ERVK 382 469 -116 5 1053 1899 162 50 32 chrX 61458219 61458621 -105191675 + RMER17C LTR ERVK 2 410 0 5 1053 378 115 0 0 chrX 61460068 61460129 -105190167 + (GA)n Simple_repeat Simple_repeat 2 62 0 5 1053 754 92 235 0 chrX 61461044 61461163 -105189133 + B1_Mus1 SINE Alu 2 148 0 5 1053 319 109 30 30 chrX 61461163 61461229 -105189067 + GA-rich Low_complexity Low_complexity 3 68 0 5 1053 423 0 0 0 chrX 61463307 61463354 -105186942 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1053 501 17 0 0 chrX 61464409 61464467 -105185829 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 1053 4701 118 64 57 chrX 61464471 61465862 -105184434 - L1_Mus2 LINE L1 0 6566 5170 5 1053 2225 110 0 3 chrX 61465869 61466214 -105184082 - L1_Mus2 LINE L1 -1291 4592 4249 5 1053 1281 75 0 0 chrX 61466343 61466575 -105183721 + (TTTC)n Simple_repeat Simple_repeat 1 232 0 5 1053 731 172 8 0 chrX 61466575 61466703 -105183593 - B1_Mur4 SINE Alu -9 141 13 5 1053 206 321 19 0 chrX 61467009 61467062 -105183234 - MIRb SINE MIR -189 79 26 5 1053 2098 198 19 54 chrX 61468761 61469226 -105181070 + RLTR1D LTR ERV1 157 605 0 5 1053 640 221 63 21 chrX 61469279 61469422 -105180874 + B1_Mur3 SINE Alu 1 149 0 5 1053 203 312 49 12 chrX 61469544 61469625 -105180671 + MIRc SINE MIR 128 211 -57 5 1053 8118 42 0 8 chrX 61469677 61470667 -105179629 + L1Md_F3 LINE L1 5588 6569 -15 5 1053 598 132 243 0 chrX 61470672 61470808 -105179488 - Lx2B LINE L1 -310 6690 6522 5 1053 1479 196 6 49 chrX 61470809 61471137 -105179159 + Lx2B LINE L1 6682 6995 -5 5 1053 279 0 0 0 chrX 61471147 61471178 -105179118 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1053 1738 216 35 55 chrX 61471199 61471654 -105178642 - RMER6B LTR ERVK -15 446 1 5 1053 340 328 187 37 chrX 61471706 61471947 -105178349 + MLT1J1 LTR MaLR 36 312 -132 5 1053 376 311 0 0 chrX 61472140 61472230 -105178066 + ID_B1 SINE B4 127 216 -8 5 1053 243 196 59 0 chrX 61472187 61472238 -105178058 + PB1D7 SINE Alu 67 120 0 5 1053 207 0 0 0 chrX 61472571 61472594 -105177702 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1053 383 281 68 26 chrX 61472622 61472739 -105177557 - RSINE1 SINE B4 -35 130 9 5 1054 22 0 0 0 chrX 61472846 61472868 -105177428 + AT_rich Low_complexity Low_complexity 1 22 0 5 1054 2566 145 29 35 chrX 61472876 61473356 -105176940 - Lx4A LINE L1 -42 7016 6540 5 1054 4822 128 55 51 chrX 61473351 61474032 -105176264 - L1_Mur2 LINE L1 -3598 2279 1624 5 1054 948 117 0 0 chrX 61474032 61474177 -105176119 + (TTTC)n Simple_repeat Simple_repeat 4 148 0 5 1054 1183 49 0 0 chrX 61474184 61474326 -105175970 - B1_Mm SINE Alu -5 142 1 5 1054 4822 153 26 42 chrX 61474326 61475332 -105174964 - L1_Mur2 LINE L1 -4276 1601 599 5 1054 24 77 0 0 chrX 61475427 61475479 -105174817 + AT_rich Low_complexity Low_complexity 1 52 0 5 1054 26 0 0 0 chrX 61475997 61476023 -105174273 + AT_rich Low_complexity Low_complexity 1 26 0 5 1054 290 347 1 0 chrX 61476672 61476764 -105173532 + B4 SINE B4 5 97 -195 5 1054 336 292 116 18 chrX 61476935 61477099 -105173197 + Lx8 LINE L1 6929 7108 -365 5 1054 437 302 11 29 chrX 61477596 61477770 -105172526 + Lx8 LINE L1 7118 7288 -185 5 1054 25 65 0 0 chrX 61477808 61477854 -105172442 + AT_rich Low_complexity Low_complexity 1 46 0 5 1054 408 20 0 0 chrX 61477857 61477906 -105172390 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1054 643 284 151 72 chrX 61477912 61478308 -105171988 - RMER15 LTR ERVL -14 561 69 5 1054 727 321 5 19 chrX 61478618 61478834 -105171462 + B3 SINE B2 4 216 0 5 1054 246 361 28 0 chrX 61478828 61478900 -105171396 + B4 SINE B4 215 288 -4 5 1054 342 0 0 0 chrX 61479080 61479118 -105171178 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1054 1002 139 0 0 chrX 61479304 61479469 -105170827 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 5 1054 414 57 0 0 chrX 61479469 61479522 -105170774 + (TCCC)n Simple_repeat Simple_repeat 3 55 0 5 1054 3758 156 22 19 chrX 61479554 61480220 -105170076 - Lx3A LINE L1 -8 6973 6306 5 1054 465 76 0 0 chrX 61480419 61480485 -105169811 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 1054 603 335 50 72 chrX 61481699 61481976 -105168320 + B4A SINE B4 22 292 0 5 1054 209 415 46 32 chrX 61482068 61482287 -105168009 - L2a LINE L2 -269 3157 2936 6 1054 1448 201 67 8 chrX 61482341 61482798 -105167498 - Lx5 LINE L1 -140 5740 5194 6 1054 5376 198 32 57 chrX 61482787 61482980 -105167316 + Lx5 LINE L1 5770 5959 -1091 6 1054 7045 41 0 1 chrX 61482980 61483827 -105166469 + L1Md_T LINE L1 5737 6582 0 6 1054 5376 198 32 57 chrX 61483827 61483858 -105166438 + Lx5 LINE L1 5960 5978 -1072 6 1054 2995 92 0 0 chrX 61483858 61484260 -105166036 + L1_Mus1 LINE L1 6165 6566 -1 6 1054 5376 198 32 57 chrX 61484260 61485348 -105164948 + Lx5 LINE L1 5979 7050 0 6 1054 357 386 26 11 chrX 61485365 61485556 -105164740 - L2a LINE L2 -518 2901 2708 6 1054 424 297 256 9 chrX 61485693 61486009 -105164287 - L2a LINE L2 -781 2638 2245 6 1054 422 364 36 36 chrX 61486366 61486674 -105163622 - L2a LINE L2 -1253 2166 1859 6 1054 402 21 0 0 chrX 61487127 61487174 -105163122 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 1054 225 0 0 0 chrX 61487174 61487198 -105163098 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 1054 502 279 0 7 chrX 61488504 61488652 -105161644 - Lx8 LINE L1 -560 6913 6767 6 1054 1759 165 3 109 chrX 61488652 61489020 -105161276 - ORR1A4 LTR MaLR 0 329 1 6 1054 976 294 56 12 chrX 61489057 61489381 -105160915 - Lx8 LINE L1 -722 6751 6414 6 1054 516 253 76 12 chrX 61489373 61489545 -105160751 + Lx8 LINE L1 6929 7111 -362 6 1054 497 309 67 25 chrX 61489579 61489864 -105160432 + Lx8 LINE L1 7170 7466 -7 6 1054 442 288 67 3 chrX 61489933 61490129 -105160167 - B3 SINE B2 0 216 1 6 1054 22 35 0 0 chrX 61490792 61490821 -105159475 + AT_rich Low_complexity Low_complexity 1 29 0 6 1054 298 42 42 0 chrX 61491505 61491553 -105158743 + (TTG)n Simple_repeat Simple_repeat 2 51 0 6 1054 249 327 33 70 chrX 61491829 61492043 -105158253 - L3 LINE CR1 -202 4287 4082 6 1054 349 340 9 9 chrX 61492402 61492509 -105157787 - U1 snRNA snRNA -1 164 58 6 1054 559 221 14 78 chrX 61492731 61492873 -105157423 - B1_Mur1 SINE Alu -16 133 1 6 1054 366 325 57 8 chrX 61492873 61492907 -105157389 - B4 SINE B4 -203 89 50 6 1054 25 51 0 0 chrX 61493252 61493291 -105157005 + AT_rich Low_complexity Low_complexity 1 39 0 6 1054 385 357 57 16 chrX 61493349 61493594 -105156702 + L1M5 LINE L1 4451 4705 -1441 6 1054 197 271 0 33 chrX 61494210 61494271 -105156025 - L2 LINE L2 -745 2674 2616 6 1054 2832 218 125 103 chrX 61494322 61494707 -105155589 - L1_Mm LINE L1 -92 5791 5385 6 1054 5420 89 12 1 chrX 61494707 61495445 -105154851 + L1Md_F2 LINE L1 5818 6563 -19 6 1054 2832 218 125 103 chrX 61495445 61496285 -105154011 - L1_Mm LINE L1 -499 5384 4542 6 1054 1809 136 0 3 chrX 61496285 61496572 -105153724 - Lx LINE L1 0 6654 6369 6 1054 2832 218 125 103 chrX 61496572 61496733 -105153563 - L1_Mm LINE L1 -1342 4541 4384 6 1054 405 0 0 0 chrX 61496733 61496778 -105153518 + (TTTTA)n Simple_repeat Simple_repeat 3 47 0 6 1054 2832 218 125 103 chrX 61496778 61497056 -105153240 - L1_Mm LINE L1 -1500 4383 4090 6 1054 378 306 54 0 chrX 61497064 61497175 -105153121 - Lx7 LINE L1 -1138 6558 6442 6 1054 722 134 17 8 chrX 61497175 61497295 -105153001 - RMER17C LTR ERVK -4 406 286 6 1054 1905 138 2 106 chrX 61497297 61497752 -105152544 - RMER17C LTR ERVK 0 410 3 6 1054 1068 276 3 10 chrX 61497770 61498074 -105152222 - Lx7 LINE L1 -1270 6426 6125 6 1054 230 0 33 0 chrX 61498429 61498459 -105151837 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1054 230 204 41 0 chrX 61498461 61498510 -105151786 + (CAGAGA)n Simple_repeat Simple_repeat 6 56 0 6 1054 222 402 43 23 chrX 61498656 61498913 -105151383 + MIRb SINE MIR 4 265 -3 6 1054 257 345 26 26 chrX 61499264 61499377 -105150919 - MTEb LTR MaLR -13 366 254 6 1054 4176 75 5 2 chrX 61499413 61500000 -105150296 + L1_Mm LINE L1 5230 5818 -65 6 1054 5677 79 0 22 chrX 61500000 61500773 -105149523 + L1Md_F2 LINE L1 5819 6574 -8 1 1054 414 248 30 37 chrX 61501123 61501257 -105149039 + L1MB1 LINE L1 5305 5437 -737 2 1054 501 238 22 30 chrX 61501351 61501485 -105148811 + RCHARR1 DNA MER1_type 842 974 0 3 1054 445 315 38 46 chrX 61501923 61502186 -105148110 + L1MB1 LINE L1 5727 5988 -201 2 1054 342 0 0 0 chrX 61503080 61503118 -105147178 + (T)n Simple_repeat Simple_repeat 1 38 0 4 1054 542 278 0 1 chrX 61503545 61503686 -105146610 - B1_Mur1 SINE Alu -6 143 4 5 1054 441 0 0 0 chrX 61505122 61505171 -105145125 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 6 1054 615 271 194 37 chrX 61505444 61505846 -105144450 - MER92B LTR ERV1 -4 632 168 7 1054 196 345 34 22 chrX 61506992 61507081 -105143215 + L2c LINE L2 3241 3330 -57 8 1054 235 210 0 31 chrX 61508116 61508180 -105142116 + (TATAA)n Simple_repeat Simple_repeat 4 65 0 9 1054 371 284 0 68 chrX 61508584 61508701 -105141595 - B4A SINE B4 -71 221 113 1 1054 244 219 41 0 chrX 61508895 61508968 -105141328 + L1MD LINE L1 5211 5286 -860 1 1054 574 232 144 54 chrX 61508937 61509361 -105140935 + L1M2 LINE L1 5255 5716 -596 1 1054 24 32 0 0 chrX 61509509 61509540 -105140756 + AT_rich Low_complexity Low_complexity 1 31 0 1 1054 1504 256 64 9 chrX 61510066 61510461 -105139835 + MTD LTR MaLR 1 405 -14 1 1054 204 360 39 39 chrX 61511278 61511382 -105138914 + L2 LINE L2 2064 2167 -1252 1 1054 326 75 0 36 chrX 61511382 61511437 -105138859 + (CATATA)n Simple_repeat Simple_repeat 4 56 0 1 1054 401 286 0 48 chrX 61511801 61511904 -105138392 + B1_Mus2 SINE Alu 1 98 -49 1 1054 251 324 35 18 chrX 61512120 61512233 -105138063 + Cheshire DNA MER1_type 165 279 -2141 1 1054 1921 31 4 0 chrX 61513663 61513890 -105136406 + L1Md_T LINE L1 5359 5586 -297 1 1054 8967 6 0 0 chrX 61513890 61514886 -105135410 + L1Md_T LINE L1 5587 6582 0 1 1054 198 310 118 20 chrX 61515376 61515478 -105134818 + MIRc SINE MIR 13 124 -144 2 1054 234 0 0 0 chrX 61516721 61516747 -105133549 + (TAAAAA)n Simple_repeat Simple_repeat 2 27 0 2 1054 393 136 0 0 chrX 61521662 61521728 -105128568 + (CA)n Simple_repeat Simple_repeat 2 67 0 2 1054 852 33 25 0 chrX 61521966 61522086 -105128210 + (GA)n Simple_repeat Simple_repeat 2 124 0 2 1054 225 191 0 0 chrX 61522596 61522643 -105127653 + T-rich Low_complexity Low_complexity 1 47 0 2 1054 339 121 0 0 chrX 61527449 61527507 -105122789 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1054 450 53 0 0 chrX 61527511 61527568 -105122728 + (GA)n Simple_repeat Simple_repeat 1 57 0 2 1054 187 133 51 39 chrX 61528129 61528207 -105122089 + A-rich Low_complexity Low_complexity 2 80 0 2 1054 198 0 0 0 chrX 61530213 61530235 -105120061 + (CCCCCG)n Simple_repeat Simple_repeat 2 23 0 2 1054 450 0 0 0 chrX 61530564 61530614 -105119682 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1054 852 168 195 32 chrX 61533418 61533603 -105116693 + B3 SINE B2 2 216 0 3 1054 282 116 0 0 chrX 61533603 61533646 -105116650 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 3 1054 294 304 47 82 chrX 61534491 61534638 -105115658 - MIRm SINE MIR -98 170 25 3 1054 255 304 113 6 chrX 61536184 61536343 -105113953 + Zaphod2 DNA Tip100 2184 2359 -1165 3 1054 199 265 89 9 chrX 61536455 61536530 -105113766 + MIRm SINE MIR 74 154 -122 3 1054 244 119 34 0 chrX 61537119 61537178 -105113118 + (TA)n Simple_repeat Simple_repeat 2 62 0 3 1054 276 30 0 0 chrX 61537257 61537290 -105113006 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1054 243 0 0 0 chrX 61540221 61540248 -105110048 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1054 28 61 0 0 chrX 61540628 61540677 -105109619 + AT_rich Low_complexity Low_complexity 1 49 0 3 1054 396 40 0 0 chrX 61541201 61541251 -105109045 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1054 2131 76 0 46 chrX 61541671 61541973 -105108323 - L1_Mus3 LINE L1 -152 6486 6199 4 1054 786 93 15 8 chrX 61541973 61542103 -105108193 + L1_Mus3 LINE L1 6501 6631 -7 4 1054 21 36 0 0 chrX 61542420 61542448 -105107848 + AT_rich Low_complexity Low_complexity 1 28 0 4 1054 2297 142 11 3 chrX 61542863 61543230 -105107066 - ORR1B1 LTR MaLR -2 392 23 4 1054 197 304 14 28 chrX 61543656 61543727 -105106569 + L3 LINE CR1 4072 4141 -348 4 1054 559 333 47 7 chrX 61545460 61545738 -105104558 - L1MC1 LINE L1 -19 6314 6026 4 1054 217 220 17 17 chrX 61545947 61546007 -105104289 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 1054 288 300 0 0 chrX 61546816 61546886 -105103410 + L1MC1 LINE L1 6173 6242 -91 4 1054 482 288 76 0 chrX 61547061 61547179 -105103117 - B1_Mur2 SINE Alu -5 144 18 4 1054 308 319 80 40 chrX 61547179 61547211 -105103085 - ID_B1 SINE B4 -5 219 64 4 1054 211 176 26 39 chrX 61547955 61548032 -105102264 + (TTA)n Simple_repeat Simple_repeat 1 76 0 4 1054 1964 120 32 68 chrX 61548680 61549019 -105101277 + ORR1A2 LTR MaLR 1 327 0 5 1054 261 291 65 39 chrX 61549361 61549515 -105100781 + L1M3 LINE L1 4613 4770 -1370 5 1054 908 316 118 6 chrX 61549613 61549960 -105100336 + MTD LTR MaLR 1 386 -33 5 1054 21 57 0 0 chrX 61550068 61550103 -105100193 + AT_rich Low_complexity Low_complexity 1 35 0 5 1054 9659 120 9 1 chrX 61551254 61552641 -105097655 - L1_Mm LINE L1 -1007 4876 3489 5 1054 363 23 0 0 chrX 61552641 61552685 -105097611 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 5 1054 9659 120 9 1 chrX 61552685 61552788 -105097508 - L1_Mm LINE L1 -2395 3488 3376 5 1054 3632 110 24 13 chrX 61552802 61553225 -105097071 - L1VL1 LINE L1 -2161 1537 1105 5 1054 1259 227 42 42 chrX 61553225 61553584 -105096712 + RLTR10D LTR ERVK 1 359 0 5 1054 3632 151 166 30 chrX 61553584 61554380 -105095916 - L1VL1 LINE L1 -5315 1107 193 5 1054 423 288 130 7 chrX 61554435 61554589 -105095707 + B3 SINE B2 44 216 0 5 1054 1637 178 9 61 chrX 61555069 61555415 -105094881 + ORR1A4 LTR MaLR 1 328 -1 5 1054 529 346 0 0 chrX 61555845 61556007 -105094289 + B3 SINE B2 2 163 -53 6 1054 270 106 0 0 chrX 61556010 61556057 -105094239 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 6 1054 831 157 51 56 chrX 61556593 61556789 -105093507 + B2_Mm2 SINE B2 1 195 0 6 1054 21 82 0 0 chrX 61556896 61556945 -105093351 + AT_rich Low_complexity Low_complexity 1 49 0 6 1054 1699 140 17 7 chrX 61556958 61557259 -105093037 - Lx2A1 LINE L1 0 7008 6705 6 1054 243 35 0 0 chrX 61557803 61557832 -105092464 + B2_Mm1t SINE B2 60 88 -105 6 1054 1057 65 50 0 chrX 61557863 61558002 -105092294 + B1_Mus2 SINE Alu 1 146 -1 6 1054 323 246 22 139 chrX 61559026 61559163 -105091133 - L2c LINE L2 -1 3386 3266 6 1054 304 104 30 0 chrX 61559428 61559495 -105090801 + (TAAAA)n Simple_repeat Simple_repeat 2 70 0 6 1054 2259 165 0 11 chrX 61559646 61560014 -105090282 + Lx4A LINE L1 6587 6950 -108 6 1054 545 0 15 0 chrX 61560023 61560088 -105090208 + (CAAAA)n Simple_repeat Simple_repeat 2 67 0 7 1054 2112 158 67 2 chrX 61560314 61560715 -105089581 + L1_Mur3 LINE L1 4759 5185 -695 7 1054 2781 237 70 45 chrX 61560700 61561505 -105088791 + Lx7 LINE L1 6870 7694 -2 7 1054 23 33 0 0 chrX 61562439 61562469 -105087827 + AT_rich Low_complexity Low_complexity 1 30 0 7 1054 25 31 0 0 chrX 61562516 61562548 -105087748 + AT_rich Low_complexity Low_complexity 1 32 0 7 1054 458 291 152 6 chrX 61562809 61563165 -105087131 - L1M4 LINE L1 -767 5379 4972 7 1054 235 306 106 18 chrX 61563188 61563301 -105086995 - MLT1G1 LTR MaLR -409 170 48 7 1054 306 361 101 55 chrX 61563725 61564053 -105086243 + Tigger8 DNA MER2_type 49 391 -275 7 1054 244 294 70 105 chrX 61565297 61565317 -105084979 - B4 SINE B4 -49 243 134 7 1054 530 234 0 0 chrX 61565317 61565411 -105084885 - B1_Mur1 SINE Alu -7 142 49 7 1054 358 351 29 15 chrX 61566738 61566874 -105083422 - B3A SINE B2 -3 195 58 8 1054 199 0 139 0 chrX 61567469 61567505 -105082791 + (CAAAA)n Simple_repeat Simple_repeat 5 45 0 8 1054 325 247 51 10 chrX 61567780 61567878 -105082418 - L1M4 LINE L1 -1092 5054 4953 8 1054 727 319 59 59 chrX 61567901 61568507 -105081789 - L1_Mm LINE L1 -502 5798 5160 8 1054 362 294 74 90 chrX 61568906 61569402 -105080894 - L1MEc LINE L1 -4697 1718 1174 8 1054 226 188 14 55 chrX 61569420 61569493 -105080803 - L1M2c LINE L1 -4826 1963 1894 8 1054 334 300 89 45 chrX 61569812 61569969 -105080327 + RMER15 LTR ERVL 405 568 -7 8 1054 726 333 127 23 chrX 61570726 61571168 -105079128 + Lx8 LINE L1 6982 7469 -4 8 1054 294 353 68 0 chrX 61571625 61571758 -105078538 - B1_Mus1 SINE Alu 0 148 7 8 1054 298 278 23 45 chrX 61571923 61572055 -105078241 + L1MB8 LINE L1 6007 6135 -43 8 1054 396 55 0 0 chrX 61572256 61572311 -105077985 + (GTTTG)n Simple_repeat Simple_repeat 1 55 0 9 1054 524 56 14 0 chrX 61573980 61574052 -105076244 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 9 1054 262 321 134 71 chrX 61574459 61574697 -105075599 + MLT1E1A LTR MaLR 188 440 -240 9 1054 1104 94 0 3 chrX 61575303 61575673 -105074623 + (GAA)n Simple_repeat Simple_repeat 1 368 0 9 1054 441 0 0 0 chrX 61576122 61576171 -105074125 + (CA)n Simple_repeat Simple_repeat 2 50 0 9 1054 654 13 0 0 chrX 61576171 61576245 -105074051 + (GA)n Simple_repeat Simple_repeat 2 76 0 9 1054 1117 323 20 11 chrX 61576263 61576611 -105073685 - MTEa LTR MaLR -9 370 20 9 1054 3059 170 26 45 chrX 61576770 61577617 -105072679 + RLTR13C1 LTR ERVK 1 785 -23 9 1054 2066 118 9 24 chrX 61577697 61578036 -105072260 + Lx3A LINE L1 6634 6967 -14 9 1054 456 51 0 0 chrX 61578037 61578096 -105072200 + (TAAA)n Simple_repeat Simple_repeat 3 61 0 9 1054 889 309 76 57 chrX 61578816 61579237 -105071059 - MLT1E1A LTR MaLR -40 640 115 1 1054 534 314 0 0 chrX 61579616 61579737 -105070559 - B3A SINE B2 -77 121 1 1 1054 1098 89 14 0 chrX 61579811 61579957 -105070339 + B1_Mus1 SINE Alu 1 148 0 1 1054 354 45 0 0 chrX 61580005 61580049 -105070247 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1054 21 71 0 0 chrX 61580160 61580202 -105070094 + AT_rich Low_complexity Low_complexity 1 42 0 1 1054 34 0 0 0 chrX 61582543 61582577 -105067719 + AT_rich Low_complexity Low_complexity 1 34 0 1 1054 242 346 0 65 chrX 61582577 61582747 -105067549 + L1M2 LINE L1 5585 5743 -557 1 1054 518 41 14 0 chrX 61582756 61582829 -105067467 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 1 1054 3047 83 16 0 chrX 61583165 61583600 -105066696 - L1_Mm LINE L1 -3689 2194 1753 1 1054 1566 112 29 8 chrX 61583624 61583866 -105066430 - L1Md_F2 LINE L1 -12 6570 6324 1 1054 941 255 5 9 chrX 61584112 61584322 -105065974 + B3 SINE B2 2 210 -6 1 1054 349 310 20 10 chrX 61584339 61584440 -105065856 - RSINE1 SINE B4 -61 104 3 1 1054 534 262 92 11 chrX 61585877 61586051 -105064245 - RMER5 LTR ERV1 -310 224 37 1 1054 2681 155 2 4 chrX 61586051 61586510 -105063786 + Lx3A LINE L1 6515 6972 -9 1 1054 635 259 64 75 chrX 61586566 61586754 -105063542 - B3A SINE B2 -12 186 1 1 1054 320 295 75 87 chrX 61586971 61587168 -105063128 - MLT1A1 LTR MaLR -16 392 199 1 1054 459 0 0 0 chrX 61588072 61588123 -105062173 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 1054 455 289 194 36 chrX 61588178 61588343 -105061953 - ID_B1 SINE B4 -23 201 11 1 1054 25 31 0 0 chrX 61589026 61589058 -105061238 + AT_rich Low_complexity Low_complexity 1 32 0 1 1054 285 350 0 31 chrX 61589280 61589407 -105060889 - RMER15 LTR ERVL -115 460 338 1 1054 3606 241 71 42 chrX 61590016 61590784 -105059512 + Lx9 LINE L1 6511 7283 -361 1 1054 360 0 0 0 chrX 61590784 61590824 -105059472 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1 1054 3606 241 71 42 chrX 61590824 61591087 -105059209 + Lx9 LINE L1 7284 7571 -73 1 1054 615 346 56 11 chrX 61591133 61591419 -105058877 - Lx8 LINE L1 -817 6656 6358 1 1054 1986 212 50 4 chrX 61592226 61592691 -105057605 - L1Md_A LINE L1 -5756 968 483 1 1054 4063 66 0 2 chrX 61592691 61593258 -105057038 + L1Md_F2 LINE L1 6062 6582 0 1 1054 204 125 0 0 chrX 61593279 61593311 -105056985 + (GAA)n Simple_repeat Simple_repeat 2 33 0 1 1054 843 406 45 29 chrX 61593329 61593844 -105056452 - LTR16E1 LTR ERVL -6 532 10 1 1054 1621 102 13 0 chrX 61593999 61594235 -105056061 + Lx2 LINE L1 6753 6991 -6 1 1054 1167 289 32 5 chrX 61594603 61594972 -105055324 + MTEb LTR MaLR 1 379 0 1 1054 3389 147 4 13 chrX 61595808 61596353 -105053943 - Lx LINE L1 -27 6627 6088 1 1054 12782 171 37 39 chrX 61596351 61597455 -105052841 - L1_Mm LINE L1 -381 5502 4384 1 1054 960 130 0 27 chrX 61597455 61597605 -105052691 - B1_Mus1 SINE Alu 0 148 3 1 1054 12782 171 37 39 chrX 61597605 61598866 -105051430 - L1_Mm LINE L1 -1500 4383 3144 1 1054 1327 44 22 11 chrX 61598866 61599049 -105051247 - L1Md_F3 LINE L1 -1 6583 6399 1 1054 12782 171 37 39 chrX 61599049 61599454 -105050842 - L1_Mm LINE L1 -2740 3143 2738 1 1054 14169 16 1 0 chrX 61600019 61601654 -105048642 + L1Md_A LINE L1 3950 5585 -298 1 1054 8323 38 0 0 chrX 61601655 61602651 -105047645 + L1Md_A LINE L1 5587 6582 0 1 1054 684 292 32 21 chrX 61603551 61603831 -105046465 - L1MA5 LINE L1 -306 5994 5712 1 1055 383 298 23 23 chrX 61603841 61604013 -105046283 + L1MA5 LINE L1 5457 5628 -672 1 1055 200 59 29 0 chrX 61604073 61604107 -105046189 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1 1055 930 294 50 8 chrX 61604240 61604620 -105045676 - L1MA4A LINE L1 -426 5877 5482 1 1055 323 308 128 23 chrX 61605776 61605909 -105044387 + ID_B1 SINE B4 64 210 -14 1 1055 761 301 27 0 chrX 61606143 61606413 -105043883 + Lx5 LINE L1 6240 6735 -725 1 1055 267 103 0 0 chrX 61607252 61607291 -105043005 + (TATG)n Simple_repeat Simple_repeat 1 39 0 1 1055 1599 207 27 17 chrX 61608440 61608789 -105041507 - Lx7 LINE L1 -1790 5906 5587 1 1055 3816 144 3 0 chrX 61608820 61609424 -105040872 - Lx3A LINE L1 -2 6979 6374 1 1055 3316 67 7 16 chrX 61609443 61609886 -105040410 - L1Md_F2 LINE L1 0 6582 6144 1 1055 1969 133 3 19 chrX 61609886 61610200 -105040096 - Lx3A LINE L1 -615 6366 6058 1 1055 3114 141 36 6 chrX 61610196 61610720 -105039576 + Lx3_Mus LINE L1 5587 6097 -912 1 1055 656 221 36 12 chrX 61610735 61610900 -105039396 - L1_Mur3 LINE L1 -321 5559 5391 1 1055 5633 126 12 27 chrX 61610904 61612756 -105037540 + L1Md_F2 LINE L1 208 2033 -3850 1 1055 6852 90 1 14 chrX 61612748 61613712 -105036584 + L1Md_F2 LINE L1 4634 5585 -298 1 1055 6885 92 19 9 chrX 61613713 61614686 -105035610 + L1Md_F2 LINE L1 5587 6568 -14 1 1055 1037 180 0 5 chrX 61614762 61614957 -105035339 - Lx2 LINE L1 -655 6342 6149 1 1055 4151 128 6 6 chrX 61614957 61615604 -105034692 + Lx2 LINE L1 6350 6996 -1 1 1055 920 299 71 43 chrX 61615776 61616217 -105034079 + RMER13A LTR ERVK 95 584 -324 1 1055 219 36 0 0 chrX 61616579 61616607 -105033689 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1 1055 1499 271 33 3 chrX 61617080 61617442 -105032854 + MTEb LTR MaLR 2 374 -5 1 1055 573 15 0 0 chrX 61618170 61618236 -105032060 + (GA)n Simple_repeat Simple_repeat 2 67 0 1 1055 21 0 0 0 chrX 61619129 61619150 -105031146 + AT_rich Low_complexity Low_complexity 1 21 0 1 1055 649 230 18 12 chrX 61619192 61619355 -105030941 - Lx5 LINE L1 -8 7042 6879 1 1055 234 0 0 0 chrX 61619421 61619447 -105030849 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1055 952 252 22 4 chrX 61619745 61619972 -105030324 - ORR1D1 LTR MaLR -143 231 1 1 1055 407 297 51 51 chrX 61621150 61621345 -105028951 - RLTR46 LTR ERVK 0 320 126 1 1055 706 188 14 21 chrX 61621389 61621530 -105028766 - RLTR46 LTR ERVK -180 140 1 1 1055 31826 111 17 21 chrX 61621718 61628122 -105022174 - L1Md_F2 LINE L1 -3 6579 205 1 1055 213 39 0 0 chrX 61628197 61628223 -105022073 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1 1055 5627 153 24 19 chrX 61628224 61629529 -105020767 - Lx LINE L1 -11 6643 5338 1 1055 438 319 91 136 chrX 61629642 61629929 -105020367 + B4A SINE B4 1 274 -18 1 1055 26 0 0 0 chrX 61629993 61630019 -105020277 + AT_rich Low_complexity Low_complexity 1 26 0 1 1055 379 305 36 27 chrX 61630308 61630527 -105019769 + L1M4 LINE L1 2830 3050 -3096 1 1055 5971 125 16 34 chrX 61630536 61630561 -105019735 - Lx3_Mus LINE L1 0 7009 6990 1 1055 342 0 0 0 chrX 61630561 61630599 -105019697 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1 1055 5971 125 16 34 chrX 61630599 61631603 -105018693 - Lx3_Mus LINE L1 -20 6989 5999 1 1055 382 346 103 15 chrX 61631851 61632112 -105018184 + Charlie25 DNA MER1_type 1050 1333 -1191 1 1055 1853 281 71 19 chrX 61632342 61632879 -105017417 + Charlie25 DNA MER1_type 1713 2277 -247 1 1055 2052 269 121 59 chrX 61633176 61633209 -105017087 - Lx9 LINE L1 -293 7351 7319 1 1055 294 29 0 0 chrX 61633209 61633244 -105017052 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1055 2052 269 121 59 chrX 61633244 61634152 -105016144 - Lx9 LINE L1 -326 7318 6352 1 1055 512 15 0 15 chrX 61634160 61634226 -105016070 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 1055 543 247 8 67 chrX 61634406 61634613 -105015683 - Lx9 LINE L1 -1739 5905 5675 1 1055 4584 159 16 51 chrX 61634613 61634782 -105015514 + L1_Mur2 LINE L1 3518 3688 -2189 1 1055 2760 118 10 2 chrX 61634782 61635200 -105015096 - BGLII LTR ERVK 0 421 1 1 1055 4584 159 16 51 chrX 61635200 61635963 -105014333 + L1_Mur2 LINE L1 3689 4417 -1460 1 1055 367 187 13 26 chrX 61635964 61636041 -105014255 - Lx7 LINE L1 -2001 5695 5620 1 1055 668 267 47 35 chrX 61636043 61636180 -105014116 + Lx9 LINE L1 7297 7441 -203 1 1055 3303 156 17 8 chrX 61636180 61636710 -105013586 + Lx3B LINE L1 6433 6967 -6 1 1055 336 102 0 0 chrX 61636714 61636763 -105013533 + (TAA)n Simple_repeat Simple_repeat 3 51 0 1 1055 668 267 47 35 chrX 61636763 61636831 -105013465 + Lx9 LINE L1 7442 7510 -134 1 1055 374 0 22 0 chrX 61636831 61636877 -105013419 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 1055 668 267 47 35 chrX 61636877 61636928 -105013368 + Lx9 LINE L1 7511 7556 -88 1 1055 1334 265 52 17 chrX 61636928 61637335 -105012961 + MTC LTR MaLR 1 421 0 1 1055 668 267 47 35 chrX 61637335 61637413 -105012883 + Lx9 LINE L1 7557 7632 -12 1 1055 1921 303 64 31 chrX 61637584 61638487 -105011809 + Lx9 LINE L1 6669 7601 -43 1 1055 3442 54 9 0 chrX 61638497 61638939 -105011357 + L1Md_F2 LINE L1 5141 5586 -297 1 1055 7329 74 2 22 chrX 61638940 61639943 -105010353 + L1Md_F2 LINE L1 5588 6570 -12 1 1055 594 41 0 0 chrX 61640009 61640082 -105010214 + (TTTA)n Simple_repeat Simple_repeat 4 76 0 1 1055 372 362 45 22 chrX 61640101 61640279 -105010017 - B3A SINE B2 -16 182 1 1 1055 287 297 53 29 chrX 61640284 61640492 -105009804 + L1ME1 LINE L1 5083 5295 -851 1 1055 5026 144 168 16 chrX 61640569 61641575 -105008721 + Lx3A LINE L1 45 1203 -5781 1 1055 1585 46 0 0 chrX 61641563 61641757 -105008539 - L1_Mm LINE L1 -971 4912 4719 1 1055 14211 128 15 15 chrX 61641756 61645103 -105005193 + Lx3A LINE L1 3619 6967 -14 1 1055 437 0 0 19 chrX 61645103 61645157 -105005139 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 1 1055 8172 145 17 22 chrX 61645157 61645173 -105005123 + Lx3A LINE L1 6968 6979 -2 1 1055 724 311 71 23 chrX 61645211 61645625 -105004671 + L1ME1 LINE L1 5408 5849 -330 1 1055 411 318 7 92 chrX 61645758 61645900 -105004396 + B3 SINE B2 19 148 -68 1 1055 405 0 0 0 chrX 61645925 61645970 -105004326 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1055 183 42 0 0 chrX 61645970 61645993 -105004303 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 1055 917 124 21 0 chrX 61647176 61647321 -105002975 + B2_Mm2 SINE B2 1 148 -47 1 1055 338 61 20 0 chrX 61647321 61647370 -105002926 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 1055 180 243 0 0 chrX 61647634 61647671 -105002625 + L3 LINE CR1 2547 2583 -1906 1 1055 328 359 9 46 chrX 61647919 61648027 -105002269 + PB1D10 SINE Alu 1 104 -13 1 1055 252 304 0 0 chrX 61649434 61649490 -105000806 + MT2A LTR ERVL 397 452 -81 1 1055 4167 61 0 4 chrX 61649490 61650076 -105000220 - L1Md_F2 LINE L1 0 6582 6047 1 1055 423 0 0 0 chrX 61650103 61650150 -105000146 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 1055 381 22 0 0 chrX 61650160 61650206 -105000090 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1055 499 246 9 0 chrX 61650259 61650373 -104999923 - MTEb LTR MaLR 0 379 265 1 1055 367 406 38 0 chrX 61650384 61650596 -104999700 - MTEb LTR MaLR -158 221 2 1 1055 30 69 0 0 chrX 61650677 61650735 -104999561 + AT_rich Low_complexity Low_complexity 1 58 0 1 1055 710 101 0 9 chrX 61651250 61651360 -104998936 + (TTTTC)n Simple_repeat Simple_repeat 2 110 0 1 1055 6065 135 18 21 chrX 61651360 61652349 -104997947 - Lx LINE L1 0 6654 5669 1 1055 4536 195 26 69 chrX 61652349 61653410 -104996886 + RLTR13D2 LTR ERVK 1 1016 -7 1 1055 6644 170 34 7 chrX 61653417 61654681 -104995615 - L1_Mm LINE L1 -209 5674 4377 2 1055 3861 140 11 2 chrX 61654681 61655311 -104994985 - L1_Mus3 LINE L1 -1 6637 6002 2 1055 32698 89 6 1 chrX 61655317 61660673 -104989623 - L1Md_F2 LINE L1 -12 6570 1190 2 1055 7733 100 4 1 chrX 61660670 61661769 -104988527 - L1_Mm LINE L1 -130 5753 4652 2 1055 451 90 0 0 chrX 61661768 61661835 -104988461 - MusHAL1 LINE L1 -455 2257 2191 2 1055 21 57 0 0 chrX 61662213 61662248 -104988048 + AT_rich Low_complexity Low_complexity 1 35 0 2 1055 7908 161 3 9 chrX 61662261 61663775 -104986521 - Lx3B LINE L1 -5 6968 5468 2 1055 259 196 0 0 chrX 61663891 61663937 -104986359 + Lx8 LINE L1 7233 7278 -195 2 1055 232 316 10 30 chrX 61663985 61664086 -104986210 + GA-rich Low_complexity Low_complexity 2 100 0 2 1055 8847 201 49 45 chrX 61664198 61665567 -104984729 + L1_Mur2 LINE L1 733 2047 -3830 2 1055 360 0 0 0 chrX 61665567 61665607 -104984689 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1055 8847 195 52 36 chrX 61665607 61666955 -104983341 + L1_Mur2 LINE L1 2048 3476 -2401 2 1055 3500 154 3 5 chrX 61666953 61667559 -104982737 - Lx3B LINE L1 -446 5440 4836 2 1055 7508 186 22 14 chrX 61667553 61669187 -104981109 + Lx4B LINE L1 5409 7058 0 2 1055 297 0 0 0 chrX 61669650 61669683 -104980613 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2 1055 1199 319 28 14 chrX 61670770 61670938 -104979358 - MTE2b LTR MaLR -5 374 198 2 1055 459 0 0 0 chrX 61670938 61670989 -104979307 + (TAA)n Simple_repeat Simple_repeat 2 52 0 2 1055 1199 319 28 14 chrX 61670989 61671182 -104979114 - MTE2b LTR MaLR -182 197 9 2 1055 270 0 0 0 chrX 61672043 61672073 -104978223 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1055 351 44 0 0 chrX 61672073 61672117 -104978179 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 1055 227 306 99 66 chrX 61672554 61672645 -104977651 + B1F2 SINE Alu 41 134 -15 2 1055 313 281 0 81 chrX 61672652 61672776 -104977520 - ORR1D2 LTR MaLR -19 351 238 2 1055 322 318 29 36 chrX 61672940 61673077 -104977219 - B1F SINE Alu -10 139 4 2 1055 340 400 90 6 chrX 61673089 61673245 -104977051 - LTR16A LTR ERVL -240 211 43 2 1055 192 412 18 0 chrX 61673359 61673473 -104976823 - L2a LINE L2 -2 3424 3309 2 1055 543 25 37 0 chrX 61674160 61674241 -104976055 + (TA)n Simple_repeat Simple_repeat 2 85 0 2 1055 409 295 133 36 chrX 61674635 61674860 -104975436 - MIRb SINE MIR 0 268 22 2 1055 468 0 0 0 chrX 61675077 61675129 -104975167 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 1055 209 320 39 0 chrX 61675142 61675220 -104975076 - MIR SINE MIR -79 183 103 2 1055 3636 168 22 2 chrX 61675246 61676012 -104974284 - Lx5 LINE L1 -1131 5919 5122 2 1055 2673 187 49 15 chrX 61676013 61676560 -104973736 - Lx2 LINE L1 0 6997 6432 2 1055 259 282 136 0 chrX 61677407 61677510 -104972786 - MLT1A0 LTR MaLR -2 363 247 2 1055 210 71 0 0 chrX 61677514 61677542 -104972754 + (TGG)n Simple_repeat Simple_repeat 1 28 0 2 1055 228 245 0 0 chrX 61677552 61677601 -104972695 + (TATG)n Simple_repeat Simple_repeat 2 50 0 2 1055 2835 287 104 34 chrX 61678720 61679688 -104970608 + Lx6 LINE L1 6425 7460 0 2 1055 369 93 0 0 chrX 61679722 61679776 -104970520 + (TA)n Simple_repeat Simple_repeat 1 54 0 2 1055 306 157 24 12 chrX 61680071 61680155 -104970141 + (TA)n Simple_repeat Simple_repeat 1 85 0 2 1055 216 0 0 0 chrX 61681184 61681208 -104969088 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1055 293 348 0 0 chrX 61681354 61681443 -104968853 + PB1D10 SINE Alu 6 94 -23 2 1055 769 219 23 91 chrX 61681942 61682163 -104968133 - ORR1D1 LTR MaLR -9 369 163 2 1055 357 24 0 0 chrX 61682166 61682208 -104968088 + (GA)n Simple_repeat Simple_repeat 2 43 0 2 1055 526 232 125 68 chrX 61682208 61682384 -104967912 - ORR1D1 LTR MaLR -188 186 1 2 1055 2130 264 83 33 chrX 61682384 61683012 -104967284 - ORR1D1-int LTR MaLR 0 1370 712 2 1055 546 230 40 0 chrX 61682990 61683116 -104967180 - ORR1D1-int LTR MaLR -1238 132 2 2 1055 642 271 92 22 chrX 61683119 61683304 -104966992 - ORR1D1 LTR MaLR -2 372 175 2 1055 210 37 0 0 chrX 61683304 61683331 -104966965 + (CAGAGA)n Simple_repeat Simple_repeat 2 28 0 2 1055 646 282 87 5 chrX 61683527 61683723 -104966573 + B3 SINE B2 2 213 -3 2 1055 304 253 89 84 chrX 61683768 61683958 -104966338 + B3A SINE B2 1 191 -7 2 1055 2350 156 33 19 chrX 61684499 61684929 -104965367 + Lx2 LINE L1 6542 6977 -20 2 1055 560 116 0 10 chrX 61684929 61685025 -104965271 + (TA)n Simple_repeat Simple_repeat 1 95 0 2 1055 1375 191 45 45 chrX 61686182 61686567 -104963729 - RMER4B LTR ERVK 0 466 121 2 1055 21 0 0 0 chrX 61686586 61686607 -104963689 + AT_rich Low_complexity Low_complexity 1 21 0 2 1055 241 300 12 36 chrX 61686909 61686992 -104963304 + ID4 SINE ID 2 82 -1 2 1055 356 316 126 37 chrX 61686997 61687345 -104962951 + L1M4 LINE L1 3347 3725 -2421 2 1055 1266 241 73 20 chrX 61687372 61687727 -104962569 - ORR1D1 LTR MaLR 0 374 1 2 1055 242 283 181 12 chrX 61687852 61688188 -104962108 + L1M4 LINE L1 2557 2949 -3197 2 1055 23 0 0 0 chrX 61688353 61688376 -104961920 + AT_rich Low_complexity Low_complexity 1 23 0 2 1055 224 349 33 65 chrX 61688524 61688616 -104961680 - PB1D10 SINE Alu -20 97 9 2 1055 693 85 0 0 chrX 61688713 61688807 -104961489 - ORR1A1 LTR MaLR -55 291 198 2 1055 269 306 155 17 chrX 61688899 61689195 -104961101 - L1M4 LINE L1 -1913 4233 3897 2 1055 463 335 71 85 chrX 61689244 61689930 -104960366 - L1M2 LINE L1 -2362 3781 3062 2 1055 2214 78 10 3 chrX 61689930 61690237 -104960059 - L1_Mus3 LINE L1 -6 6632 6324 2 1055 317 295 161 44 chrX 61690237 61690491 -104959805 - L1M2 LINE L1 -3082 3061 2772 2 1055 519 264 26 33 chrX 61690772 61690925 -104959371 + Charlie2b DNA MER1_type 172 323 -2459 2 1055 22 35 0 0 chrX 61691263 61691292 -104959004 + AT_rich Low_complexity Low_complexity 1 29 0 2 1055 435 38 0 0 chrX 61691319 61691372 -104958924 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 1055 553 337 0 10 chrX 61691515 61691710 -104958586 + Lx9 LINE L1 7059 7251 -393 2 1055 258 156 0 0 chrX 61692021 61692066 -104958230 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 1055 521 316 70 33 chrX 61692176 61692389 -104957907 + MTC LTR MaLR 20 240 -181 2 1055 366 260 117 97 chrX 61692522 61692667 -104957629 + MTC LTR MaLR 219 402 -17 2 1055 433 282 8 0 chrX 61693110 61693234 -104957062 + L1VL1 LINE L1 171 295 -6127 2 1055 31659 96 2 6 chrX 61693222 61695823 -104954473 + L1Md_F2 LINE L1 98 2484 -3399 2 1055 3024 35 53 3 chrX 61695823 61696200 -104954096 - MTA_Mm LTR MaLR 0 396 1 2 1055 31659 82 1 2 chrX 61696200 61699303 -104950993 + L1Md_F2 LINE L1 2485 5587 -296 2 1055 7915 55 0 0 chrX 61699303 61700290 -104950006 + L1Md_F2 LINE L1 5588 6574 -8 2 1055 444 294 0 0 chrX 61700346 61700455 -104949841 - PB1D10 SINE Alu -8 109 1 2 1055 2410 60 9 0 chrX 61700817 61701133 -104949163 - L1_Mus1 LINE L1 -512 6055 5737 2 1055 4203 67 17 0 chrX 61701134 61701673 -104948623 + L1_Mus1 LINE L1 6016 6563 -4 2 1055 26 82 0 0 chrX 61701695 61701756 -104948540 + AT_rich Low_complexity Low_complexity 1 61 0 2 1055 280 167 56 0 chrX 61702104 61702156 -104948140 - MTE2b LTR MaLR -5 374 320 2 1055 360 397 46 46 chrX 61702156 61702309 -104947987 + RSINE1 SINE B4 3 155 -10 2 1055 940 269 31 83 chrX 61702390 61702715 -104947581 - MTE2b LTR MaLR -44 335 28 2 1055 711 335 80 12 chrX 61703024 61703423 -104946873 + Lx9 LINE L1 6896 7473 -171 2 1055 23 68 0 0 chrX 61703480 61703524 -104946772 + AT_rich Low_complexity Low_complexity 1 44 0 2 1055 474 266 50 7 chrX 61703954 61704096 -104946200 + B3 SINE B2 5 154 -39 2 1055 251 273 30 15 chrX 61704278 61704345 -104945951 - B3 SINE B2 -4 212 145 2 1055 25 65 0 0 chrX 61705376 61705422 -104944874 + AT_rich Low_complexity Low_complexity 1 46 0 2 1055 369 326 100 83 chrX 61705685 61706036 -104944260 + MLT1C LTR MaLR 103 459 -8 2 1055 25 0 0 0 chrX 61707085 61707110 -104943186 + AT_rich Low_complexity Low_complexity 1 25 0 2 1055 2123 200 67 16 chrX 61708631 61709078 -104941218 - Lx4B LINE L1 -4 7054 6585 2 1055 1175 39 0 13 chrX 61709070 61709228 -104941068 + L1Md_F2 LINE L1 6427 6582 0 2 1055 1490 161 51 4 chrX 61709229 61709485 -104940811 - Lx4A LINE L1 -451 6607 6340 2 1055 4393 171 23 4 chrX 61709481 61710689 -104939607 - Lx4B LINE L1 -780 6278 5040 2 1055 1301 223 40 23 chrX 61710689 61711042 -104939254 - RLTR10D LTR ERVK 0 359 1 2 1055 2128 170 21 11 chrX 61711042 61711422 -104938874 - IAP-d-int LTR ERVK 0 6542 6159 2 1055 2344 221 12 14 chrX 61711462 61712044 -104938252 - IAP-d-int LTR ERVK -483 6059 5479 2 1055 18220 266 21 14 chrX 61712039 61717173 -104933123 - IAP-d-int LTR ERVK -1367 5175 3 2 1055 1151 236 46 23 chrX 61717175 61717526 -104932770 - RLTR10D LTR ERVK 0 359 1 2 1055 927 155 26 16 chrX 61717526 61717716 -104932580 - Lx4B LINE L1 -832 5045 4854 2 1055 29418 132 25 42 chrX 61717732 61724157 -104926139 - L1_Mus1 LINE L1 0 6567 277 2 1055 948 141 6 11 chrX 61724264 61724443 -104925853 + CT-rich Low_complexity Low_complexity 3 180 0 2 1055 3247 187 60 7 chrX 61724496 61725185 -104925111 - Lx4B LINE L1 -5749 1337 613 2 1055 2649 261 48 11 chrX 61726304 61726466 -104923830 - Lx6 LINE L1 -6 7454 7299 2 1055 2865 89 5 2 chrX 61726466 61726861 -104923435 - MTA_Mm LTR MaLR 0 396 1 2 1055 2649 261 48 11 chrX 61726861 61727367 -104922929 - Lx6 LINE L1 -162 7298 6761 2 1055 381 276 10 0 chrX 61728896 61728994 -104921302 + MIRb SINE MIR 104 202 -66 2 1055 345 296 103 64 chrX 61729100 61729368 -104920928 - ORR1E LTR MaLR -76 303 3 2 1055 22 94 0 0 chrX 61729455 61729519 -104920777 + AT_rich Low_complexity Low_complexity 1 64 0 2 1055 208 358 18 0 chrX 61730032 61730141 -104920155 - MIRc SINE MIR -7 261 151 2 1055 5198 261 40 56 chrX 61730838 61731931 -104918365 + Lx7 LINE L1 5894 7020 -676 2 1055 285 51 0 0 chrX 61731931 61731970 -104918326 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1055 5198 261 40 56 chrX 61731970 61732246 -104918050 + Lx7 LINE L1 7021 7256 -440 2 1055 1126 163 59 5 chrX 61732246 61732468 -104917828 - Lx2B LINE L1 -3 6997 6764 2 1055 5198 261 40 56 chrX 61732468 61732733 -104917563 + Lx7 LINE L1 7257 7503 -193 2 1055 306 0 0 0 chrX 61732733 61732767 -104917529 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 2 1055 617 222 114 36 chrX 61732767 61732798 -104917498 + Lx7 LINE L1 7459 7489 -207 2 1055 1112 82 0 26 chrX 61732798 61732949 -104917347 - B1_Mus1 SINE Alu -1 147 1 2 1055 617 222 114 36 chrX 61732949 61733137 -104917159 + Lx7 LINE L1 7490 7695 -1 2 1055 5045 174 117 12 chrX 61734055 61734795 -104915501 + L1_Mur2 LINE L1 1474 2314 -3563 2 131 4766 145 30 35 chrX 61734795 61735705 -104914591 - RMER17A2 LTR ERVK -1 905 1 2 1056 5045 174 117 12 chrX 61735705 61736215 -104914081 + L1_Mur2 LINE L1 2315 2855 -3022 2 1056 2771 148 74 67 chrX 61736667 61737275 -104913021 + RMER17C-int LTR ERVK 1422 2033 -1205 2 1056 479 168 199 0 chrX 61737293 61737464 -104912832 + RMER17C-int LTR ERVK 2155 2359 -879 2 1056 2258 133 158 16 chrX 61737452 61738071 -104912225 + RMER17C-int LTR ERVK 2532 3238 0 2 1056 1413 199 54 44 chrX 61738071 61738277 -104912019 + RMER17C LTR ERVK 1 192 -218 2 1056 396 0 0 0 chrX 61738277 61738321 -104911975 + (TCTG)n Simple_repeat Simple_repeat 4 47 0 2 1056 1413 199 54 44 chrX 61738321 61738520 -104911776 + RMER17C LTR ERVK 193 410 0 2 1056 606 286 11 17 chrX 61738520 61738694 -104911602 + Lx5 LINE L1 6878 7050 0 2 1056 2128 100 57 6 chrX 61738904 61739153 -104911143 + L1_Mus2 LINE L1 5856 6108 -458 3 1056 294 50 0 0 chrX 61739153 61739193 -104911103 + (TTAGGG)n Simple_repeat Simple_repeat 1 40 0 3 1056 2128 100 57 6 chrX 61739193 61739276 -104911020 + L1_Mus2 LINE L1 6109 6204 -362 3 1056 3109 90 0 0 chrX 61739263 61739685 -104910611 + L1_Mm LINE L1 4740 5161 -722 3 1056 426 301 58 54 chrX 61739692 61740034 -104910262 - L1M1 LINE L1 -700 5600 5254 3 1056 1189 226 123 9 chrX 61740066 61740406 -104909890 - RMER16 LTR ERVK 0 533 155 3 1056 5664 168 34 16 chrX 61740541 61740675 -104909621 + L1_Mur2 LINE L1 4750 4875 -1002 2 1056 1072 51 0 14 chrX 61740675 61740814 -104909482 + B1_Mus1 SINE Alu 2 138 -10 3 1056 392 0 21 0 chrX 61740814 61740862 -104909434 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 3 1056 5664 168 34 16 chrX 61740862 61741821 -104908475 + L1_Mur2 LINE L1 4876 5863 -14 2 1056 3233 115 32 15 chrX 61741818 61742348 -104907948 + L1_Mur1 LINE L1 4668 5206 -680 3 1056 38481 6 0 1 chrX 61742341 61748121 -104902175 + L1Md_A LINE L1 1 5586 -297 3 1056 8973 5 0 0 chrX 61748121 61749117 -104901179 + L1Md_A LINE L1 5587 6582 0 3 1056 4026 137 9 2 chrX 61749117 61749762 -104900534 + L1_Mur1 LINE L1 5198 5847 -39 3 1056 24 85 0 0 chrX 61750138 61750197 -104900099 + AT_rich Low_complexity Low_complexity 1 59 0 3 1056 1719 258 60 29 chrX 61751100 61751647 -104898649 + Lx7 LINE L1 6959 7522 -174 3 1056 1293 135 13 42 chrX 61751626 61751865 -104898431 - Lx LINE L1 -271 6383 6152 3 1056 293 282 33 33 chrX 61751865 61752045 -104898251 + Lx7 LINE L1 7516 7695 -1 3 1056 204 40 0 0 chrX 61752063 61752088 -104898208 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1056 2286 110 6 6 chrX 61752088 61752418 -104897878 + Lx LINE L1 5827 6156 -498 3 1056 2321 176 32 14 chrX 61752418 61752857 -104897439 - RMER12 LTR ERVK -875 447 1 3 1056 247 276 181 0 chrX 61753365 61753481 -104896815 + L1MCa LINE L1 1025 1161 -5347 3 1056 337 329 25 57 chrX 61753583 61753741 -104896555 - B4A SINE B4 -134 158 6 3 1056 363 287 86 46 chrX 61753746 61753921 -104896375 + L1MCa LINE L1 1184 1365 -5143 3 1056 22 35 0 0 chrX 61754212 61754241 -104896055 + AT_rich Low_complexity Low_complexity 1 29 0 3 1056 929 178 184 47 chrX 61754423 61754700 -104895596 - Lx7 LINE L1 0 7696 7382 3 1056 21 0 0 0 chrX 61754733 61754754 -104895542 + AT_rich Low_complexity Low_complexity 1 21 0 3 1056 31 0 0 0 chrX 61754858 61754889 -104895407 + AT_rich Low_complexity Low_complexity 1 31 0 3 1056 356 352 98 49 chrX 61754953 61755198 -104895098 + B4 SINE B4 31 287 -5 3 1056 29 28 0 0 chrX 61755259 61755295 -104895001 + AT_rich Low_complexity Low_complexity 1 36 0 3 1056 24 53 0 0 chrX 61755372 61755410 -104894886 + AT_rich Low_complexity Low_complexity 1 38 0 3 1056 364 306 62 85 chrX 61755673 61756486 -104893810 + L1MCa LINE L1 2759 3552 -2769 3 1056 3263 253 26 42 chrX 61756503 61757373 -104892923 - Lx5 LINE L1 -2 7048 6193 3 1056 614 253 152 76 chrX 61758193 61758535 -104891761 + RLTR9A LTR ERVK 1 368 0 3 1056 1781 320 54 84 chrX 61758535 61759486 -104890810 - ORR1D2-int LTR MaLR -442 928 8 3 1056 794 251 174 49 chrX 61759493 61759740 -104890556 - ORR1D2 LTR MaLR 0 370 93 3 1056 575 312 20 56 chrX 61759837 61760034 -104890262 - B3A SINE B2 -7 191 2 3 1056 535 280 73 0 chrX 61760173 61760323 -104889973 + MTE2a LTR MaLR 219 379 0 3 1056 29 28 0 0 chrX 61760768 61760804 -104889492 + AT_rich Low_complexity Low_complexity 1 36 0 3 1056 333 0 0 0 chrX 61761205 61761242 -104889054 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1056 257 29 0 0 chrX 61761779 61761813 -104888483 - L1_Mm LINE L1 -3307 2576 2543 3 1056 2199 71 3 52 chrX 61761813 61762139 -104888157 + L1Md_F2 LINE L1 6258 6567 -15 3 1056 30 0 0 0 chrX 61762246 61762276 -104888020 + AT_rich Low_complexity Low_complexity 1 30 0 3 1056 364 253 13 0 chrX 61762379 61762458 -104887838 + PB1D10 SINE Alu 20 99 -18 3 1056 229 289 77 0 chrX 61763533 61763637 -104886659 - Tigger5 DNA MER2_type -1 2405 2294 3 1056 237 333 111 28 chrX 61763622 61763730 -104886566 - Tigger5 DNA MER2_type -2141 265 149 3 1056 953 180 51 0 chrX 61763941 61764119 -104886177 + B2_Mm2 SINE B2 1 187 -8 3 1056 249 33 0 0 chrX 61764126 61764156 -104886140 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 1056 6569 127 97 4 chrX 61765017 61766132 -104884164 - Lx3_Mus LINE L1 -8 7001 5783 3 1056 2669 65 3 49 chrX 61766233 61766618 -104883678 - L1Md_F2 LINE L1 0 6582 6216 3 1056 11048 107 13 4 chrX 61766618 61768279 -104882017 - L1_Mur1 LINE L1 -91 5795 4120 3 1056 31428 76 14 16 chrX 61768288 61769938 -104880358 - L1Md_F2 LINE L1 -3 6579 4848 3 1056 231 271 30 40 chrX 61769938 61770038 -104880258 + MER72B LTR ERV1 280 378 -390 3 1056 31428 76 14 16 chrX 61770038 61770246 -104880050 - L1Md_F2 LINE L1 -3 4847 4628 3 1056 240 59 0 0 chrX 61770246 61770280 -104880016 + (TTG)n Simple_repeat Simple_repeat 2 35 0 3 1056 31428 97 25 32 chrX 61770280 61774525 -104875771 - L1Md_F2 LINE L1 -1256 4627 416 3 1056 18087 132 46 9 chrX 61774525 61778228 -104872068 - L1_Mur1 LINE L1 -1752 4134 37 3 1056 22 56 0 0 chrX 61778286 61778322 -104871974 + AT_rich Low_complexity Low_complexity 1 36 0 3 1056 877 177 7 0 chrX 61778325 61778472 -104871824 + B1_Mus1 SINE Alu 1 148 0 3 1056 1136 232 9 122 chrX 61779305 61779649 -104870647 + Lx9 LINE L1 6960 7264 -380 3 1056 4212 119 60 23 chrX 61780602 61781399 -104868897 + RLTR13D4 LTR ERVK 1 1033 0 3 1056 24 32 0 0 chrX 61781526 61781557 -104868739 + AT_rich Low_complexity Low_complexity 1 31 0 3 1056 23 54 0 0 chrX 61782494 61782531 -104867765 + AT_rich Low_complexity Low_complexity 1 37 0 3 1056 4200 150 8 17 chrX 61782762 61783474 -104866822 - Lx LINE L1 -5 6649 5944 3 1056 2881 125 5 0 chrX 61783476 61783993 -104866303 + Lx LINE L1 5413 5931 -723 3 1056 411 330 27 54 chrX 61783994 61784215 -104866081 - B3 SINE B2 0 216 2 3 1056 1964 203 46 35 chrX 61784521 61784975 -104865321 + RMER6C LTR ERVK 1 459 -231 3 1056 441 0 0 0 chrX 61785036 61785085 -104865211 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1056 458 79 13 0 chrX 61785085 61785161 -104865135 + (GA)n Simple_repeat Simple_repeat 1 77 0 3 1056 566 314 102 11 chrX 61785558 61785745 -104864551 + ID_B1 SINE B4 14 217 -7 3 1056 272 279 0 0 chrX 61785861 61785922 -104864374 + MLT1A0 LTR MaLR 183 243 -122 3 1056 352 143 0 49 chrX 61786466 61786547 -104863749 + T-rich Low_complexity Low_complexity 5 81 0 3 1056 215 167 62 0 chrX 61786600 61786648 -104863648 + T-rich Low_complexity Low_complexity 4 54 0 3 1056 31 44 0 0 chrX 61787675 61787720 -104862576 + AT_rich Low_complexity Low_complexity 1 45 0 3 1056 304 367 149 16 chrX 61787926 61788175 -104862121 + MLT1F LTR MaLR 24 305 -250 3 1056 3060 111 2 4 chrX 61788218 61788670 -104861626 - Lx LINE L1 0 6654 6204 3 1056 324 360 46 41 chrX 61788675 61788754 -104861542 + MLT1F LTR MaLR 343 419 -129 3 1056 4161 153 92 28 chrX 61788754 61789606 -104860690 + RMER17A2 LTR ERVK 1 906 0 3 1056 324 360 46 41 chrX 61789606 61789723 -104860573 + MLT1F LTR MaLR 420 540 -8 3 1056 4671 132 69 1 chrX 61790113 61790976 -104859320 - Lx3B LINE L1 -542 6431 5499 3 1056 2839 165 15 10 chrX 61790976 61791495 -104858801 + Lx3B LINE L1 6445 6966 -7 3 1056 583 289 26 0 chrX 61791530 61791686 -104858610 - Lx8 LINE L1 -142 7331 7172 3 1056 372 256 49 8 chrX 61791687 61791809 -104858487 + L1_Mur3 LINE L1 4932 5058 -822 3 1056 463 212 35 0 chrX 61792097 61792210 -104858086 + Lx2A1 LINE L1 6886 7002 -6 3 1056 35833 39 6 3 chrX 61792460 61797637 -104852659 + L1Md_T LINE L1 304 5589 -297 3 1056 8302 39 0 0 chrX 61797637 61798632 -104851664 + L1Md_T LINE L1 5590 6584 -1 3 1056 1011 289 19 56 chrX 61800797 61800994 -104849302 - Lx9 LINE L1 -225 7419 7221 3 1056 2126 104 27 59 chrX 61800994 61801332 -104848964 - ORR1A2 LTR MaLR 0 327 1 3 1056 1011 289 19 56 chrX 61801332 61801545 -104848751 - Lx9 LINE L1 -424 7220 7024 3 1056 258 172 35 0 chrX 61802274 61802332 -104847964 + A-rich Low_complexity Low_complexity 6 65 0 3 1056 417 129 0 0 chrX 61802460 61802530 -104847766 + (TCC)n Simple_repeat Simple_repeat 1 70 0 3 1056 31 44 0 0 chrX 61804088 61804133 -104846163 + AT_rich Low_complexity Low_complexity 1 45 0 3 1056 517 312 24 81 chrX 61804444 61804653 -104845643 + B3A SINE B2 2 198 0 3 1056 375 23 0 0 chrX 61805089 61805133 -104845163 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1056 813 235 12 17 chrX 61805138 61805311 -104844985 - B3 SINE B2 -44 172 1 3 1056 339 286 78 71 chrX 61805352 61805646 -104844650 - L1ME2z LINE L1 -351 6093 5798 3 1056 991 61 0 135 chrX 61806349 61806519 -104843777 - B1_Mm SINE Alu 0 147 1 3 1056 300 70 0 0 chrX 61806681 61806724 -104843572 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1056 654 72 0 0 chrX 61806724 61806820 -104843476 + (GA)n Simple_repeat Simple_repeat 1 97 0 3 1056 300 266 109 60 chrX 61806950 61807134 -104843162 - L1MC LINE L1 -2399 5483 5291 3 1056 2796 180 152 25 chrX 61807641 61808280 -104842016 + RMER6D LTR ERVK 1 720 0 3 1056 37792 32 0 0 chrX 61808558 61814973 -104835323 - L1Md_T LINE L1 0 6585 73 3 1056 21 36 0 0 chrX 61815581 61815609 -104834687 + AT_rich Low_complexity Low_complexity 1 28 0 3 1056 383 322 36 79 chrX 61815916 61816081 -104834215 - RSINE1 SINE B4 0 165 8 3 1056 3620 192 50 73 chrX 61816625 61817611 -104832685 + RMER12 LTR ERVK 1 1527 -281 3 1056 2588 118 26 3 chrX 61817611 61817833 -104832463 - MTB LTR MaLR 0 400 171 3 1056 5504 38 15 0 chrX 61817833 61818498 -104831798 - L1Md_F2 LINE L1 -2 6580 5906 3 1056 2588 118 26 3 chrX 61818498 61818666 -104831630 - MTB LTR MaLR -230 170 2 3 1056 349 233 83 91 chrX 61818761 61818893 -104831403 + RLTR21 LTR ERVK 1341 1471 -101 3 1056 224 262 131 21 chrX 61819409 61819527 -104830769 + MIRb SINE MIR 41 175 -93 3 1056 471 264 31 23 chrX 61820189 61820317 -104829979 - B1_Mur2 SINE Alu -20 129 1 3 1056 344 342 102 33 chrX 61820712 61820957 -104829339 + L2 LINE L2 2751 3012 -407 3 1056 576 248 65 71 chrX 61821152 61821321 -104828975 + RMER20B LTR ERVK 1 168 -459 3 1056 2433 168 20 0 chrX 61821388 61821786 -104828510 + MT2B LTR ERVL 1 406 -195 3 1056 207 326 76 0 chrX 61821990 61822082 -104828214 + L2 LINE L2 2822 2920 -499 3 1056 24 32 0 0 chrX 61823231 61823262 -104827034 + AT_rich Low_complexity Low_complexity 1 31 0 3 1056 5285 216 70 21 chrX 61823566 61824914 -104825382 + Lx2B LINE L1 5587 7000 0 3 1056 253 215 15 0 chrX 61825141 61825206 -104825090 - Lx2 LINE L1 -2 6995 6930 3 1056 2898 152 20 2 chrX 61825205 61825694 -104824602 + Lx2B LINE L1 5684 6181 -819 3 1056 339 236 0 0 chrX 61826312 61826328 -104823968 + L1Md_T LINE L1 6144 6159 -423 3 1056 2364 113 3 3 chrX 61826328 61826673 -104823623 - L1_Mus2 LINE L1 0 6566 6222 4 1056 473 36 0 0 chrX 61826673 61826728 -104823568 + L1_Mus2 LINE L1 6155 6209 -357 4 1056 386 356 65 32 chrX 61827734 61828035 -104822261 + L1M2 LINE L1 4740 5045 -1101 4 1056 735 259 91 0 chrX 61828035 61828232 -104822064 + B3 SINE B2 2 216 0 4 1056 643 339 39 55 chrX 61828828 61829140 -104821156 + ORR1E LTR MaLR 51 357 -2 4 1056 336 376 19 13 chrX 61829359 61829518 -104820778 - Lx8 LINE L1 -234 7239 7080 4 1056 222 0 25 50 chrX 61830428 61830468 -104819828 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 1056 3660 138 10 0 chrX 61830722 61831302 -104818994 + Lx LINE L1 6059 6644 -10 4 1056 201 211 0 0 chrX 61831308 61831360 -104818936 + A-rich Low_complexity Low_complexity 1 52 0 4 1056 29953 110 22 14 chrX 61831886 61837376 -104812920 + L1Md_F2 LINE L1 1 5585 -298 4 1056 7479 76 3 2 chrX 61837377 61838372 -104811924 + L1Md_F2 LINE L1 5587 6582 0 4 1056 292 194 0 31 chrX 61838374 61838438 -104811858 + L1_Mur2 LINE L1 4462 4523 -1354 4 1056 567 341 11 6 chrX 61838539 61838610 -104811686 - MTD LTR MaLR -149 270 199 4 1056 504 0 0 0 chrX 61838610 61838666 -104811630 + (TTA)n Simple_repeat Simple_repeat 2 57 0 4 1056 567 341 11 6 chrX 61838666 61838771 -104811525 - MTD LTR MaLR -221 198 94 4 1056 2144 308 119 11 chrX 61838772 61839723 -104810573 + Lx8 LINE L1 6414 7468 -5 4 1056 530 297 38 92 chrX 61839737 61840130 -104810166 + L1MA5 LINE L1 5480 5851 -449 4 1056 480 62 0 0 chrX 61840195 61840259 -104810037 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 1056 204 118 29 0 chrX 61840279 61840313 -104809983 + (CAGA)n Simple_repeat Simple_repeat 1 35 0 4 1056 218 257 0 41 chrX 61840558 61840631 -104809665 + T-rich Low_complexity Low_complexity 1 70 0 4 1056 23 33 0 0 chrX 61840942 61840972 -104809324 + AT_rich Low_complexity Low_complexity 1 30 0 4 1056 212 163 40 20 chrX 61841295 61841345 -104808951 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 4 1056 344 297 102 19 chrX 61841655 61841820 -104808476 + MIRc SINE MIR 54 234 -34 4 1056 1663 243 72 16 chrX 61842566 61843093 -104807203 - L1_Mur3 LINE L1 -7001 711 1 4 1056 396 0 0 0 chrX 61843338 61843382 -104806914 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1056 205 143 0 45 chrX 61844136 61844180 -104806116 + T-rich Low_complexity Low_complexity 5 46 0 4 1056 5221 149 50 1 chrX 61844299 61845213 -104805083 - Lx2B LINE L1 0 7000 6042 4 1056 1765 103 8 0 chrX 61845213 61845475 -104804821 + Lx2B LINE L1 5751 6014 -986 4 1056 1204 227 146 12 chrX 61845727 61846090 -104804206 - MTD LTR MaLR -14 405 7 4 1056 1424 332 123 12 chrX 61846419 61847426 -104802870 + Lx8 LINE L1 6212 7329 -144 4 1056 27 0 0 0 chrX 61847514 61847541 -104802755 + AT_rich Low_complexity Low_complexity 1 27 0 4 1056 337 233 106 10 chrX 61847546 61847650 -104802646 - Lx8 LINE L1 -1063 6410 6297 4 1056 528 16 0 0 chrX 61847651 61847712 -104802584 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 1056 718 327 8 16 chrX 61847877 61848126 -104802170 - Lx8 LINE L1 -805 6668 6422 4 1056 235 350 96 50 chrX 61848142 61848464 -104801832 + Lx8 LINE L1 7127 7463 -10 4 1056 694 174 25 0 chrX 61848479 61848600 -104801696 + B1_Mur4 SINE Alu 27 150 0 4 1056 183 100 0 0 chrX 61848603 61848633 -104801663 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 4 1056 1001 94 13 0 chrX 61848638 61848797 -104801499 + (GAAA)n Simple_repeat Simple_repeat 2 162 0 4 1056 462 36 0 0 chrX 61848856 61848912 -104801384 + (TAAA)n Simple_repeat Simple_repeat 1 56 0 4 1056 391 306 114 34 chrX 61849078 61849106 -104801190 + Lx8 LINE L1 7203 7228 -245 4 1056 918 19 0 0 chrX 61849106 61849214 -104801082 + (TTC)n Simple_repeat Simple_repeat 1 108 0 4 1056 391 306 114 34 chrX 61849214 61849422 -104800874 + Lx8 LINE L1 7229 7458 -15 4 1056 1876 129 40 0 chrX 61849544 61849846 -104800450 - L1_Mus3 LINE L1 -8 6630 6317 4 1056 1207 114 0 6 chrX 61849846 61850014 -104800282 + L1_Mus3 LINE L1 6151 6317 -249 4 1056 722 124 8 0 chrX 61850072 61850193 -104800103 + (TA)n Simple_repeat Simple_repeat 2 123 0 4 1056 297 0 0 0 chrX 61850193 61850225 -104800071 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1056 255 154 62 0 chrX 61850225 61850290 -104800006 - L1_Mus3 LINE L1 -46 6592 6524 4 1056 266 328 75 43 chrX 61850592 61850843 -104799453 + MIR SINE MIR 5 268 0 4 1056 30 0 0 0 chrX 61851311 61851341 -104798955 + AT_rich Low_complexity Low_complexity 1 30 0 4 1056 806 304 88 16 chrX 61851496 61851747 -104798549 - B4A SINE B4 -14 278 10 4 1056 236 363 39 19 chrX 61851912 61852016 -104798280 - MER58A DNA MER1_type -113 111 6 4 1056 3611 152 62 15 chrX 61852325 61853446 -104796850 - Lx3A LINE L1 -4 6977 5527 4 1056 237 65 0 0 chrX 61853517 61853548 -104796748 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1056 1590 302 139 14 chrX 61853626 61854415 -104795881 + RCHARR1 DNA MER1_type 59 946 -28 4 1056 232 333 0 0 chrX 61855414 61855498 -104794798 - MTEb LTR MaLR -2 377 294 4 1056 472 301 45 23 chrX 61855991 61856168 -104794128 - B3A SINE B2 -17 181 1 4 1056 183 315 111 83 chrX 61856169 61856349 -104793947 - L2a LINE L2 -15 3411 3227 4 1056 1356 244 33 22 chrX 61856674 61857034 -104793262 - RMER5 LTR ERV1 0 534 171 4 1056 274 64 20 60 chrX 61857051 61857101 -104793195 - RMER5 LTR ERV1 -335 199 152 4 1056 316 175 60 36 chrX 61857103 61857186 -104793110 - L2 LINE L2 -770 2649 2565 4 1056 292 351 76 0 chrX 61857282 61857413 -104792883 - L2 LINE L2 -1201 2218 2078 4 1056 301 344 32 16 chrX 61857617 61857741 -104792555 + MamGyp-int LTR Gypsy 3562 3687 -1375 4 1056 6794 103 58 8 chrX 61859315 61860376 -104789920 + Lx LINE L1 5543 6654 0 4 1056 927 118 0 0 chrX 61861007 61861151 -104789145 + (TTCC)n Simple_repeat Simple_repeat 2 145 0 4 1056 361 191 0 0 chrX 61861181 61861249 -104789047 - L1_Mm LINE L1 -750 5133 5066 4 1056 513 0 0 0 chrX 61861461 61861518 -104788778 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 1056 5530 74 0 4 chrX 61861525 61862255 -104788041 - L1Md_F2 LINE L1 -4 6578 5852 4 1056 16822 124 18 10 chrX 61862255 61864991 -104785305 - L1_Mus3 LINE L1 -561 5322 2565 4 1056 3740 125 4 12 chrX 61864964 61865481 -104784815 - L1_Mus3 LINE L1 -677 5961 5452 4 1056 207 0 0 0 chrX 61865481 61865504 -104784792 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 4 1056 3740 157 7 24 chrX 61865504 61865747 -104784549 - L1_Mus3 LINE L1 -432 5451 5215 4 1057 250 125 0 0 chrX 61866229 61866269 -104784027 - MT2B LTR ERVL -2 582 543 4 1057 311 121 17 0 chrX 61866295 61866353 -104783943 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 4 1057 1250 285 92 46 chrX 61866355 61866664 -104783632 - MT2B LTR ERVL -58 543 239 4 1057 1090 196 261 0 chrX 61866664 61866955 -104783341 + ORR1B2 LTR MaLR 1 367 0 4 1057 1250 285 92 46 chrX 61866955 61867164 -104783132 - MT2B LTR ERVL -363 238 2 4 1057 8245 151 32 3 chrX 61867273 61868664 -104781632 + Lx2 LINE L1 5587 6995 -2 4 1057 4349 60 0 2 chrX 61868920 61869507 -104780789 - L1_Mus1 LINE L1 -430 6137 5552 4 1057 3427 71 0 0 chrX 61869507 61869943 -104780353 + L1_Mus1 LINE L1 6132 6567 0 4 1057 2676 78 7 47 chrX 61870075 61870479 -104779817 + RLTR10 LTR ERVK 1 388 -2 4 1057 946 269 176 41 chrX 61870688 61871154 -104779142 - MT2A LTR ERVL 0 533 5 4 1057 550 60 24 0 chrX 61871754 61871837 -104778459 + (GA)n Simple_repeat Simple_repeat 1 85 0 4 1057 1420 229 61 11 chrX 61871953 61872315 -104777981 + RLTR14 LTR ERV1 3 382 0 4 1057 437 264 65 9 chrX 61872835 61872942 -104777354 - RSINE1 SINE B4 -33 132 20 4 1057 999 118 0 0 chrX 61873839 61873983 -104776313 + B1_Mus1 SINE Alu 3 146 -2 4 1057 180 0 0 0 chrX 61873983 61874003 -104776293 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 4 1057 2046 228 42 21 chrX 61874091 61874679 -104775617 + RLTR31_Mm LTR ERVK 1 692 0 4 1057 185 415 11 0 chrX 61874714 61874808 -104775488 + MIR SINE MIR 48 142 -120 4 1057 347 294 53 45 chrX 61874852 61874984 -104775312 + B3A SINE B2 66 198 0 4 1057 355 328 31 0 chrX 61875956 61876084 -104774212 + MLT1A1 LTR MaLR 1 132 -276 4 1057 1455 259 32 30 chrX 61876937 61877398 -104772898 + RLTR22_Mur LTR ERVK 28 489 -1359 4 1057 452 327 17 48 chrX 61877414 61877749 -104772547 + L1VL4 LINE L1 10 517 -3043 4 1057 468 246 61 14 chrX 61877780 61877928 -104772368 - RMER12 LTR ERVK -1167 155 1 4 1057 5040 127 22 8 chrX 61877943 61879181 -104771115 + L1VL4 LINE L1 509 1762 -1797 4 1057 39146 67 2 22 chrX 61879181 61886544 -104763752 - L1Md_T LINE L1 0 6582 99 4 1057 15001 152 12 27 chrX 61886546 61888918 -104761378 + L1_Mus4 LINE L1 2108 4455 -1428 4 1057 1591 47 0 0 chrX 61888918 61889108 -104761188 + B2_Mm1t SINE B2 1 190 -3 4 1057 15001 142 22 29 chrX 61889108 61891357 -104758939 + L1_Mus4 LINE L1 4456 6636 0 4 1057 405 0 0 0 chrX 61892030 61892075 -104758221 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 1057 507 17 0 0 chrX 61892075 61892134 -104758162 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1057 985 257 14 42 chrX 61892804 61893092 -104757204 + Lx7 LINE L1 7038 7317 -379 4 1057 333 0 0 0 chrX 61893093 61893130 -104757166 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 4 1057 222 125 25 0 chrX 61893191 61893231 -104757065 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1057 528 16 0 0 chrX 61893289 61893350 -104756946 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 1057 690 276 130 31 chrX 61893544 61893646 -104756650 + L1M4b LINE L1 2285 2397 -4937 4 1057 582 15 0 0 chrX 61893646 61893713 -104756583 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 4 1057 690 276 130 31 chrX 61893713 61894157 -104756139 + L1M4b LINE L1 2398 2884 -4450 4 1057 207 0 0 0 chrX 61894202 61894225 -104756071 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1057 3068 215 20 9 chrX 61894531 61895521 -104754775 + L1_Mur3 LINE L1 804 1869 -4008 4 1057 803 150 46 0 chrX 61895500 61895653 -104754643 + L1_Mur3 LINE L1 3724 3883 -1994 4 1057 523 156 33 0 chrX 61895656 61895746 -104754550 + L1_Mur3 LINE L1 5469 5561 -325 4 1057 4458 174 9 40 chrX 61895815 61896779 -104753517 - L1_Mur2 LINE L1 -594 5283 4350 4 1057 400 344 3 9 chrX 61896779 61896917 -104753379 + B1_Mur2 SINE Alu 9 147 -1 4 1057 623 229 0 0 chrX 61897252 61897374 -104752922 + B1_Mus1 SINE Alu 22 143 -5 4 1057 664 285 75 0 chrX 61897467 61897667 -104752629 + B3 SINE B2 1 215 -1 4 1057 239 335 49 25 chrX 61897686 61897931 -104752365 + L1M4 LINE L1 5341 5591 -587 4 1057 1909 165 50 50 chrX 61897924 61898301 -104751995 + L1VL2 LINE L1 62 438 -5897 4 1057 6452 127 40 10 chrX 61898300 61899416 -104750880 + MusHAL1 LINE L1 534 1683 -1029 4 1057 7806 119 35 13 chrX 61899424 61900995 -104749301 + L1Md_F2 LINE L1 370 1969 -3914 5 1057 180 0 0 0 chrX 61900995 61901015 -104749281 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 1057 7806 82 8 1 chrX 61901015 61901372 -104748924 + L1Md_F2 LINE L1 1970 2334 -3549 5 1057 16842 98 6 6 chrX 61901357 61903913 -104746383 + L1Md_F2 LINE L1 3414 5971 -611 5 1057 1137 207 56 49 chrX 61903917 61904201 -104746095 + RLTR46 LTR ERVK 30 315 -5 5 1057 427 240 42 82 chrX 61904210 61904404 -104745892 + IAPEY3-int LTR ERVK 3 198 -1272 5 1057 3647 257 34 18 chrX 61904405 61905406 -104744890 + IAPEY3-int LTR ERVK 535 1551 -6129 5 1057 5505 211 5 9 chrX 61905403 61906682 -104743614 + IAPEY3-int LTR ERVK 4417 5711 -1870 5 1057 3276 143 2 86 chrX 61906687 61907327 -104742969 + IAPEY3-int LTR ERVK 6849 7434 -147 5 1057 2512 70 0 0 chrX 61907329 61907641 -104742655 + RLTR10-int LTR ERVK 1486 1797 -190 5 1057 744 93 0 0 chrX 61907666 61907774 -104742522 + IAPEY3-int LTR ERVK 7474 7581 0 5 1057 1115 230 33 40 chrX 61907783 61908059 -104742237 + RLTR46 LTR ERVK 42 315 -5 5 1057 4145 92 13 10 chrX 61908062 61908667 -104741629 + L1Md_F2 LINE L1 5972 6578 -4 5 1057 291 149 60 0 chrX 61908667 61908734 -104741562 + MusHAL1 LINE L1 1677 1747 -965 5 1057 14843 168 10 3 chrX 61908723 61911743 -104738553 + L1_Mus4 LINE L1 2995 6035 -601 5 1057 4141 98 2 0 chrX 61911736 61912331 -104737965 - L1Md_F2 LINE L1 -1141 4742 4147 5 1057 6112 81 2 1 chrX 61912331 61913159 -104737137 + L1Md_F2 LINE L1 4757 5585 -298 5 1057 7368 78 3 5 chrX 61913160 61914155 -104736141 + L1Md_F2 LINE L1 5587 6579 -3 5 1057 26 0 0 0 chrX 61914324 61914350 -104735946 + AT_rich Low_complexity Low_complexity 1 26 0 5 1057 576 313 61 51 chrX 61914391 61914687 -104735609 - RMER20B LTR ERVK -232 395 97 5 1057 477 366 26 13 chrX 61914848 61915078 -104735218 - Lx8 LINE L1 -100 7373 7141 5 1057 515 239 95 62 chrX 61915157 61915266 -104735030 - MTC-int LTR MaLR -129 1129 1008 5 1057 387 0 0 0 chrX 61915266 61915309 -104734987 + (TAA)n Simple_repeat Simple_repeat 2 44 0 5 1057 515 239 95 62 chrX 61915309 61915440 -104734856 - MTC-int LTR MaLR -251 1007 882 5 1057 7595 117 11 44 chrX 61915455 61916540 -104733756 - Lx3_Mus LINE L1 -3 7006 5923 5 1057 186 43 0 0 chrX 61916540 61916563 -104733733 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 1057 7595 117 11 44 chrX 61916563 61916574 -104733722 - Lx3_Mus LINE L1 -1087 5922 5922 5 1057 234 0 0 0 chrX 61916574 61916600 -104733696 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 5 1057 7595 117 11 44 chrX 61916600 61916768 -104733528 - Lx3_Mus LINE L1 -1087 5922 5783 5 1057 303 100 17 0 chrX 61916763 61916823 -104733473 - L1Md_F2 LINE L1 -2 6580 6520 5 1057 5977 71 1 0 chrX 61916823 61917625 -104732671 + L1_Mm LINE L1 3368 4170 -1713 5 1057 2348 206 27 44 chrX 61917625 61918045 -104732251 + RLTR20B3 LTR ERVK 39 461 -116 5 1057 408 20 0 0 chrX 61918045 61918094 -104732202 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 1057 2348 206 27 44 chrX 61918094 61918221 -104732075 + RLTR20B3 LTR ERVK 462 577 0 5 1057 1260 224 96 91 chrX 61919634 61919997 -104730299 + ORR1D1 LTR MaLR 8 372 -2 5 1057 6160 63 14 1 chrX 61920055 61920852 -104729444 - L1_Mus1 LINE L1 -1 6566 5760 5 1057 23 0 0 0 chrX 61921019 61921042 -104729254 + AT_rich Low_complexity Low_complexity 1 23 0 5 1057 258 340 107 19 chrX 61921143 61921302 -104728994 + L1MCa LINE L1 332 504 -6004 5 1057 1764 233 22 7 chrX 61921711 61922126 -104728170 - MTC LTR MaLR 0 421 1 5 1057 373 353 89 21 chrX 61922198 61922389 -104727907 + MLT-int LTR MaLR 1343 1546 -189 5 1057 578 288 110 6 chrX 61922474 61922638 -104727658 - ORR1D2 LTR MaLR -14 356 176 5 1057 183 186 0 0 chrX 61922667 61922710 -104727586 + GA-rich Low_complexity Low_complexity 2 44 0 5 1057 333 0 0 0 chrX 61922712 61922749 -104727547 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 1057 432 0 0 0 chrX 61922749 61922796 -104727500 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 1057 302 324 88 0 chrX 61922868 61923004 -104727292 - B1F1 SINE Alu 0 149 2 5 1057 324 83 0 0 chrX 61923586 61923634 -104726662 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1057 288 77 0 0 chrX 61923636 61923675 -104726621 + (GA)n Simple_repeat Simple_repeat 2 40 0 5 1057 310 121 15 15 chrX 61924292 61924359 -104725937 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 1057 28 29 0 0 chrX 61924491 61924526 -104725770 + AT_rich Low_complexity Low_complexity 1 35 0 5 1057 21 0 0 0 chrX 61925284 61925305 -104724991 + AT_rich Low_complexity Low_complexity 1 21 0 5 1057 189 0 0 0 chrX 61925498 61925519 -104724777 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1057 21 71 0 0 chrX 61926289 61926331 -104723965 + AT_rich Low_complexity Low_complexity 1 42 0 5 1057 1167 232 11 4 chrX 61926798 61927062 -104723234 + ORR1D2-int LTR MaLR 1062 1327 -43 5 1057 1168 312 31 11 chrX 61927082 61927439 -104722857 + ORR1D2 LTR MaLR 6 369 -1 5 1057 6771 130 38 37 chrX 61927892 61929096 -104721200 - Lx3_Mus LINE L1 -8 7001 5797 5 1057 3421 109 0 0 chrX 61929096 61929611 -104720685 + L1_Mur1 LINE L1 4110 4624 -1262 5 1057 33324 29 0 0 chrX 61929611 61933612 -104716684 + L1Md_T LINE L1 1585 5586 -297 5 1057 8496 30 0 0 chrX 61933612 61934608 -104715688 + L1Md_T LINE L1 5587 6582 0 5 1057 6752 99 1 71 chrX 61934608 61935716 -104714580 + L1_Mur1 LINE L1 4784 5813 -73 5 1057 1144 274 32 4 chrX 61935748 61936026 -104714270 + Lx5 LINE L1 6761 7046 -4 5 1057 4633 107 23 1 chrX 61936144 61936398 -104713898 - L1_Mus3 LINE L1 0 6638 6384 5 1057 328 20 20 20 chrX 61936398 61936448 -104713848 + (TTTTG)n Simple_repeat Simple_repeat 3 52 0 5 1057 4633 107 23 1 chrX 61936448 61936895 -104713401 - L1_Mus3 LINE L1 -255 6383 5924 5 1057 285 378 17 52 chrX 61937651 61937824 -104712472 + MLT2F LTR ERVL 285 451 -212 5 1057 477 211 0 0 chrX 61937959 61938082 -104712214 + (TA)n Simple_repeat Simple_repeat 2 124 0 5 1057 2742 67 0 3 chrX 61938647 61938994 -104711302 + ORR1A1 LTR MaLR 1 346 0 5 1057 8752 97 30 24 chrX 61938994 61940456 -104709840 + ORR1A1-int LTR MaLR 1 1509 0 5 1057 2636 48 9 0 chrX 61940456 61940791 -104709505 + ORR1A1 LTR MaLR 1 338 -8 5 1057 1052 291 99 23 chrX 61941653 61941998 -104708298 - MTEb LTR MaLR -3 376 6 5 1057 2104 150 3 0 chrX 61941999 61942325 -104707971 - ORR1A2 LTR MaLR 0 327 1 5 1057 326 170 21 21 chrX 61942491 61942587 -104707709 + (TA)n Simple_repeat Simple_repeat 1 96 0 5 1057 208 306 0 0 chrX 61942813 61942898 -104707398 + (TG)n Simple_repeat Simple_repeat 2 86 0 5 1057 230 42 20 59 chrX 61943476 61943527 -104706769 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 5 1057 330 26 0 0 chrX 61944668 61944707 -104705589 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1057 643 235 48 6 chrX 61945214 61945381 -104704915 + RMER5 LTR ERV1 361 534 0 5 1057 21 0 0 0 chrX 61946909 61946930 -104703366 + AT_rich Low_complexity Low_complexity 1 21 0 5 1057 210 91 0 0 chrX 61947002 61947035 -104703261 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1057 601 249 47 68 chrX 61947270 61947460 -104702836 - B2_Mm2 SINE B2 -9 186 1 5 1057 569 290 127 18 chrX 61947500 61947840 -104702456 + MLT-int LTR MaLR 175 551 -1184 5 1057 679 177 8 4 chrX 61948391 61948518 -104701778 + RLTR26 LTR ERVK 1 124 -784 5 1057 3415 137 6 6 chrX 61948518 61949034 -104701262 + MERVK26-int LTR ERVK 1 516 -6403 5 1057 307 20 39 39 chrX 61949045 61949097 -104701199 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 5 1057 2032 117 0 0 chrX 61949172 61949453 -104700843 - MERVK26-int LTR ERVK -17 6902 6622 5 1057 737 335 166 22 chrX 61949453 61949862 -104700434 + MLT-int LTR MaLR 1259 1726 -9 5 1057 182 315 25 92 chrX 61950655 61950774 -104699522 - L3 LINE CR1 -865 3624 3514 5 1057 369 267 28 19 chrX 61950860 61950967 -104699329 - RLTR23 LTR ERV1 0 430 323 5 1057 498 17 0 0 chrX 61951441 61951500 -104698796 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 1057 223 343 41 27 chrX 61951874 61952021 -104698275 - MIR SINE MIR -13 249 101 5 1057 400 273 34 114 chrX 61954443 61954679 -104695617 + Lx6 LINE L1 7244 7460 0 5 1057 210 35 35 0 chrX 61954679 61954708 -104695588 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 5 1057 982 131 23 0 chrX 61954709 61954884 -104695412 + GA-rich Low_complexity Low_complexity 2 180 0 5 1057 23 0 0 0 chrX 61955140 61955163 -104695133 + AT_rich Low_complexity Low_complexity 1 23 0 5 1057 459 0 0 0 chrX 61955902 61955953 -104694343 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1057 227 158 0 0 chrX 61956282 61956320 -104693976 + Lx3C LINE L1 6787 6824 -152 5 1057 261 339 0 0 chrX 61956457 61956516 -104693780 + RCHARR1 DNA MER1_type 9 67 -907 5 1057 1315 122 0 0 chrX 61956968 61957165 -104693131 + L1_Mus2 LINE L1 6370 6566 0 5 1057 216 0 0 0 chrX 61957303 61957327 -104692969 + (TTG)n Simple_repeat Simple_repeat 1 24 0 5 1057 928 162 0 13 chrX 61957358 61957508 -104692788 - B1_Mus1 SINE Alu 0 148 1 5 1057 683 346 88 4 chrX 61957594 61957855 -104692441 - B4A SINE B4 -8 284 2 5 1057 23 0 0 0 chrX 61958135 61958158 -104692138 + AT_rich Low_complexity Low_complexity 1 23 0 5 1057 29 47 0 0 chrX 61960039 61960082 -104690214 + AT_rich Low_complexity Low_complexity 1 43 0 5 1057 24 77 0 0 chrX 61960293 61960345 -104689951 + AT_rich Low_complexity Low_complexity 1 52 0 5 1057 2112 150 109 2 chrX 61960950 61961371 -104688925 + Lx4B LINE L1 4598 5063 -814 5 1057 1596 155 4 11 chrX 61961372 61961639 -104688657 + RMER13B LTR ERVK 75 339 -569 5 1057 4090 208 60 5 chrX 61961639 61962499 -104687797 - RMER13B LTR ERVK 0 908 1 5 1057 679 168 0 7 chrX 61962500 61962638 -104687658 + Lx4B LINE L1 5219 5355 -522 5 1057 7056 196 24 26 chrX 61962660 61964134 -104686162 + Lx4B LINE L1 5587 7057 -1 5 1057 31 0 0 0 chrX 61964134 61964165 -104686131 + AT_rich Low_complexity Low_complexity 1 31 0 5 1057 21 36 0 0 chrX 61964319 61964347 -104685949 + AT_rich Low_complexity Low_complexity 1 28 0 5 1057 280 299 0 38 chrX 61964547 61964627 -104685669 - B4 SINE B4 -121 171 95 5 1057 251 173 0 0 chrX 61964656 61964708 -104685588 - Lx8 LINE L1 -2 7471 7420 5 1057 293 159 63 0 chrX 61964728 61964791 -104685505 - B4 SINE B4 -213 79 13 5 1057 34 42 0 0 chrX 61964844 61964892 -104685404 + AT_rich Low_complexity Low_complexity 1 48 0 5 1057 301 397 14 7 chrX 61965398 61965545 -104684751 + MLT1A1 LTR MaLR 28 175 -233 5 1057 264 312 22 79 chrX 61965579 61965718 -104684578 + ID_B1 SINE B4 92 222 -2 5 1057 277 271 63 71 chrX 61965597 61965724 -104684572 + B1F SINE Alu 24 149 0 5 1057 415 264 115 27 chrX 61966108 61966291 -104684005 - L1MEf LINE L1 -2971 3175 2977 5 1057 21 36 0 0 chrX 61966378 61966406 -104683890 + AT_rich Low_complexity Low_complexity 1 28 0 5 1057 413 340 37 63 chrX 61966448 61966933 -104683363 - L1MEf LINE L1 -4563 1679 1176 5 1057 301 265 23 35 chrX 61967014 61967100 -104683196 - MLT2C1 LTR ERVL -96 301 217 5 1057 276 375 12 0 chrX 61968024 61968104 -104682192 + ID4 SINE ID 3 83 0 5 1057 231 180 87 33 chrX 61968380 61968472 -104681824 - L1M4b LINE L1 -7136 198 102 5 1057 231 268 0 0 chrX 61968473 61968570 -104681726 + (CATATA)n Simple_repeat Simple_repeat 4 100 0 6 1057 221 333 62 23 chrX 61969852 61969981 -104680315 - MIR SINE MIR -44 218 85 6 1057 240 375 60 35 chrX 61970465 61970664 -104679632 + ORR1E LTR MaLR 146 349 -10 6 1057 274 266 112 12 chrX 61970671 61970751 -104679545 - Lx7 LINE L1 -506 7190 7103 6 1057 486 207 0 139 chrX 61970769 61970971 -104679325 + Lx7 LINE L1 7511 7684 -12 6 1057 20500 151 13 12 chrX 61971113 61974830 -104675466 - L1_Mm LINE L1 -832 5051 1329 6 1057 1856 144 191 24 chrX 61974830 61975243 -104675053 + RLTR45 LTR ERVK 1 482 0 6 1057 3605 124 31 26 chrX 61975243 61975511 -104674785 + RLTR45-int LTR ERVK 1 283 -6961 6 1057 279 0 0 0 chrX 61975511 61975542 -104674754 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 6 1057 3605 124 31 26 chrX 61975542 61975845 -104674451 + RLTR45-int LTR ERVK 284 575 -6669 6 1057 1146 28 0 40 chrX 61976612 61976762 -104673534 + RLTR45-int LTR ERVK 549 692 -6552 6 1057 1771 59 0 0 chrX 61977118 61977337 -104672959 + RLTR45-int LTR ERVK 692 910 -6334 6 1057 762 126 0 0 chrX 61977459 61977578 -104672718 + RLTR45-int LTR ERVK 913 1031 -6213 6 1057 323 269 64 55 chrX 61977929 61978238 -104672058 + SRV_MM-int LTR ERVK 2339 2608 -5072 6 1057 484 259 28 28 chrX 61978413 61978556 -104671740 + RNERVK23-int LTR ERVK 6195 6337 -1880 6 1057 2593 54 0 0 chrX 61978941 61979254 -104671042 + RLTR45-int LTR ERVK 1329 1641 -5603 6 1057 7397 109 13 6 chrX 61979601 61980736 -104669560 + RLTR45-int LTR ERVK 6331 7804 -413 6 1057 2256 124 145 19 chrX 61980736 61981164 -104669132 + RLTR45 LTR ERVK 1 482 0 6 1057 1864 238 7 45 chrX 61981164 61981846 -104668450 - L1VL4 LINE L1 -5650 1332 665 6 1057 6359 136 28 12 chrX 61981857 61983171 -104667125 + Lx LINE L1 5307 6642 -12 6 1057 1092 293 68 20 chrX 61983245 61983687 -104666609 + RMER5 LTR ERV1 33 495 -39 6 1057 6986 122 66 5 chrX 61983721 61984854 -104665442 - Lx2A1 LINE L1 -5 7003 5802 6 1057 333 0 0 0 chrX 61984943 61984980 -104665316 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1057 29 84 0 0 chrX 61985018 61985089 -104665207 + AT_rich Low_complexity Low_complexity 1 71 0 6 1057 660 284 86 109 chrX 61985148 61985659 -104664637 - RLTR18 LTR ERVK -140 476 25 6 1057 479 323 159 61 chrX 61985680 61985957 -104664339 - MT2A LTR ERVL 0 533 230 6 1057 512 341 70 19 chrX 61986557 61986930 -104663366 - Lx8 LINE L1 0 7473 7082 6 1057 2870 216 140 70 chrX 61987067 61987904 -104662392 + RMER19B LTR ERVK 1 895 -7 6 1057 1531 313 96 29 chrX 61987912 61988537 -104661759 - Lx8 LINE L1 -550 6923 6257 6 1057 330 108 13 26 chrX 61988542 61988618 -104661678 + (TTTG)n Simple_repeat Simple_repeat 2 76 0 6 1057 446 324 0 0 chrX 61988672 61988780 -104661516 + B3A SINE B2 25 132 -66 6 1057 21 0 0 0 chrX 61988848 61988869 -104661427 + AT_rich Low_complexity Low_complexity 1 21 0 6 1057 300 102 0 0 chrX 61989868 61989917 -104660379 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1057 972 332 19 5 chrX 61991075 61991448 -104658848 - MTEa LTR MaLR -1 378 1 6 1057 22 0 0 0 chrX 61991451 61991473 -104658823 + AT_rich Low_complexity Low_complexity 1 22 0 6 1057 2766 174 2 80 chrX 61991492 61992118 -104658178 + L1_Mur2 LINE L1 3270 3846 -2031 6 1057 4202 92 6 2 chrX 61992581 61993212 -104657084 + L1_Mus1 LINE L1 1430 2063 -3820 6 1057 13670 98 4 1 chrX 61993208 61995887 -104654409 + L1_Mus1 LINE L1 3879 6567 0 6 1057 243 357 53 47 chrX 61996808 61996958 -104653338 - MIR3 SINE MIR -13 195 45 6 1058 2192 111 53 56 chrX 61997528 61997902 -104652394 - RLTR9A2 LTR ERVK 0 383 11 6 1058 671 271 63 29 chrX 61997915 61998359 -104651937 - L1M2 LINE L1 -2579 3564 3106 6 1058 911 307 19 42 chrX 61998361 61998738 -104651558 + ORR1D2 LTR MaLR 1 368 -2 6 1058 1013 315 81 35 chrX 61998746 61999203 -104651093 + ORR1D2-int LTR MaLR 7 484 -886 6 1058 947 144 0 6 chrX 61999211 61999379 -104650917 + (GAA)n Simple_repeat Simple_repeat 1 167 0 6 1058 553 287 33 84 chrX 61999380 61999593 -104650703 + ORR1D2-int LTR MaLR 460 661 -709 6 1058 220 260 111 30 chrX 62000438 62000537 -104649759 + L4 LINE RTE 1320 1426 -603 1 1058 294 301 42 42 chrX 62000913 62001104 -104649192 - L1_Rod LINE L1 -298 5858 5623 2 1058 351 0 0 0 chrX 62001655 62001694 -104648602 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1058 4030 285 59 22 chrX 62001694 62002979 -104647317 - Lx7 LINE L1 -295 7401 6068 4 1058 395 305 45 11 chrX 62004524 62004700 -104645596 - Lx7 LINE L1 -1725 5971 5790 4 1058 2063 228 213 6 chrX 62004698 62005474 -104644822 - Lx7 LINE L1 -341 5539 4604 4 1058 302 84 0 66 chrX 62005479 62005555 -104644741 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 5 1058 7796 50 21 6 chrX 62005593 62006822 -104643474 - L1Md_F2 LINE L1 -14 6568 5324 6 1058 1142 75 0 0 chrX 62006822 62006969 -104643327 - B1_Mus2 SINE Alu 0 147 1 7 1058 5356 73 4 20 chrX 62006969 62007152 -104643144 - L1Md_F2 LINE L1 -560 5323 5145 6 1058 1460 222 96 20 chrX 62007488 62007988 -104642308 - Lx7 LINE L1 -1481 4399 3862 4 1058 1834 160 24 34 chrX 62008003 62008417 -104641879 + RMER17C LTR ERVK 1 410 0 8 1058 9117 193 117 87 chrX 62008418 62011229 -104639067 + RMER17C-int LTR ERVK 1 2874 -364 8 1058 587 60 12 0 chrX 62011229 62011313 -104638983 + (TG)n Simple_repeat Simple_repeat 2 86 0 9 1058 9117 193 117 87 chrX 62011313 62011560 -104638736 + RMER17C-int LTR ERVK 2875 3149 -89 8 1058 1868 154 32 27 chrX 62011628 62012036 -104638260 + RMER17C LTR ERVK 1 410 0 8 1058 347 195 26 0 chrX 62012036 62012113 -104638183 - Lx7 LINE L1 -2377 3503 3425 4 1058 39 68 0 0 chrX 62012113 62012187 -104638109 + AT_rich Low_complexity Low_complexity 1 74 0 1 1058 29401 36 0 0 chrX 62012253 62016528 -104633768 - L1Md_T LINE L1 -2 6583 2309 1 1058 6717 68 3 25 chrX 62016538 62017698 -104632598 - L1Md_T LINE L1 -4374 1512 271 1 1058 3130 264 97 74 chrX 62017701 62018925 -104631371 - Lx7 LINE L1 -2450 3430 2170 4 1058 2553 161 37 41 chrX 62018925 62019436 -104630860 - Lx2 LINE L1 0 6997 6489 1 1058 3130 249 94 84 chrX 62019436 62020426 -104629870 - Lx7 LINE L1 -3711 2169 1172 4 1058 3523 58 27 29 chrX 62020426 62020902 -104629394 + MT2C_Mm LTR ERVL 1 475 0 1 1058 272 153 72 144 chrX 62020902 62020915 -104629381 - Lx7 LINE L1 -6557 1171 1159 4 1058 346 316 44 0 chrX 62020961 62021119 -104629177 - Lx7 LINE L1 -6576 1152 988 4 1058 212 178 22 22 chrX 62021944 62021990 -104628306 + B4A SINE B4 5 50 -242 1 1058 812 284 19 37 chrX 62021998 62022269 -104628027 - RLTR12B LTR ERVK -255 273 8 1 1058 413 329 19 58 chrX 62022273 62022428 -104627868 + B4A SINE B4 136 284 -8 1 1058 866 322 67 21 chrX 62022917 62023247 -104627049 - MTEa LTR MaLR -13 366 22 1 1058 1768 203 166 4 chrX 62023343 62023794 -104626502 + RLTR28 LTR ERVL 1 524 0 1 1058 3030 212 83 42 chrX 62024563 62025381 -104624915 - Lx9 LINE L1 -15 7629 6778 1 1058 374 240 0 0 chrX 62025392 62025467 -104624829 - RMER6C LTR ERVK -3 687 613 2 1058 1627 220 100 81 chrX 62025475 62026107 -104624189 - L1_Rod LINE L1 -53 5794 5151 2 1058 424 156 0 0 chrX 62026105 62026182 -104624114 - L1_Rod LINE L1 -4008 1839 1763 2 1058 3648 214 56 112 chrX 62026173 62026294 -104624002 - RMER1A Other Other 0 1030 911 2 1058 399 56 0 0 chrX 62026294 62026348 -104623948 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1058 3648 214 56 112 chrX 62026348 62027317 -104622979 - RMER1A Other Other -120 910 1 2 1058 2476 243 59 14 chrX 62027341 62028005 -104622291 - L1_Rod LINE L1 -6399 773 80 2 1058 4425 56 4 0 chrX 62028065 62028618 -104621678 + L1Md_F2 LINE L1 6016 6570 -12 2 1058 239 195 177 25 chrX 62028751 62028830 -104621466 - RLTR12B LTR ERVK -48 480 390 2 1058 241 211 0 19 chrX 62028835 62028888 -104621408 + RLTR22_Mur LTR ERVK 18 69 -1779 2 1058 5564 48 21 4 chrX 62028903 62029613 -104620683 - L1Md_F2 LINE L1 -4 6578 5857 2 1058 2086 62 0 0 chrX 62029617 62029875 -104620421 + L1Md_F2 LINE L1 5588 5845 -739 2 1058 3511 160 55 18 chrX 62029878 62029940 -104620356 + RLTR22_Mur LTR ERVK 83 145 -1703 2 1058 516 32 0 0 chrX 62029940 62030002 -104620294 + (TA)n Simple_repeat Simple_repeat 1 62 0 3 1058 3511 160 55 18 chrX 62030002 62030618 -104619678 + RLTR22_Mur LTR ERVK 146 785 -1063 2 1058 397 335 45 68 chrX 62030799 62031020 -104619276 + RMER12 LTR ERVK 1101 1316 -6 3 1058 1643 159 95 51 chrX 62031020 62031222 -104619074 + RMER17C LTR ERVK 3 188 -222 3 1058 529 14 29 0 chrX 62031222 62031292 -104619004 + (TC)n Simple_repeat Simple_repeat 2 73 0 3 1058 1643 159 95 51 chrX 62031292 62031480 -104618816 + RMER17C LTR ERVK 189 409 -1 3 1058 859 237 65 62 chrX 62031570 62031773 -104618523 - RLTR12B LTR ERVK -225 303 100 3 1058 1083 82 0 0 chrX 62031773 62031919 -104618377 + B1_Mus1 SINE Alu 2 147 -1 3 1058 402 21 0 0 chrX 62031920 62031967 -104618329 + (TAA)n Simple_repeat Simple_repeat 1 47 0 3 1058 859 237 65 62 chrX 62031967 62032053 -104618243 - RLTR12B LTR ERVK -429 99 11 3 1058 389 338 90 0 chrX 62032793 62032926 -104617370 - B4A SINE B4 -147 145 1 3 1058 258 136 0 0 chrX 62033050 62033094 -104617202 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 1058 414 0 0 0 chrX 62033111 62033157 -104617139 + (TAG)n Simple_repeat Simple_repeat 3 48 0 3 1058 3340 175 34 11 chrX 62033461 62034114 -104616182 + RMER6A LTR ERVK 1 668 -88 4 1058 21 36 0 0 chrX 62034195 62034223 -104616073 + AT_rich Low_complexity Low_complexity 1 28 0 4 1058 324 0 0 0 chrX 62034759 62034795 -104615501 + (TTA)n Simple_repeat Simple_repeat 3 38 0 4 1058 477 34 0 0 chrX 62036616 62036675 -104613621 + (TG)n Simple_repeat Simple_repeat 1 59 0 4 1058 1646 205 45 18 chrX 62037001 62037398 -104612898 - Lx2B LINE L1 -627 6373 5966 4 1058 2693 185 47 50 chrX 62037397 62037995 -104612301 + Lx2B LINE L1 6404 6999 -1 4 1058 441 0 0 0 chrX 62038007 62038056 -104612240 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1058 350 304 35 140 chrX 62038546 62038775 -104611521 - B3A SINE B2 -1 215 11 4 1058 231 189 0 0 chrX 62038846 62038899 -104611397 + (TATG)n Simple_repeat Simple_repeat 3 55 0 4 1058 7886 43 1 7 chrX 62039530 62040511 -104609785 + L1Md_F3 LINE L1 5596 6570 -14 4 1058 250 344 24 39 chrX 62040521 62040648 -104609648 + RMER15 LTR ERVL 448 572 -3 4 1058 21 0 0 0 chrX 62040732 62040753 -104609543 + AT_rich Low_complexity Low_complexity 1 21 0 5 1058 21 36 0 0 chrX 62042389 62042417 -104607879 + AT_rich Low_complexity Low_complexity 1 28 0 5 1058 1432 215 56 40 chrX 62042536 62042914 -104607382 + ORR1C2 LTR MaLR 1 384 0 5 1058 282 300 0 0 chrX 62043026 62043106 -104607190 - Lx7 LINE L1 -1955 5741 5662 5 1058 1108 280 52 3 chrX 62043141 62043431 -104606865 + RMER1B Other Other 2 305 -761 5 1058 391 186 29 10 chrX 62043422 62043525 -104606771 + L1_Mur2 LINE L1 3637 3741 -2136 5 1058 29432 171 26 50 chrX 62043535 62045536 -104604760 + L1_Mus1 LINE L1 225 2195 -3688 5 1058 207 0 0 0 chrX 62045536 62045559 -104604737 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1058 29432 114 7 6 chrX 62045559 62049960 -104600336 + L1_Mus1 LINE L1 2196 6567 0 5 1058 5750 150 2 48 chrX 62049970 62050252 -104600044 + L1_Mm LINE L1 3262 3538 -2345 5 1058 248 111 0 0 chrX 62050252 62050288 -104600008 - U2 snRNA snRNA -151 37 2 5 1058 5750 150 2 48 chrX 62050288 62051056 -104599240 + L1_Mm LINE L1 3539 4297 -1586 5 1058 2532 283 59 20 chrX 62051058 62052070 -104598226 + L1_Mur3 LINE L1 3315 4366 -1514 6 1058 1527 61 42 5 chrX 62053113 62053327 -104596969 + L1_Mus1 LINE L1 6346 6567 0 6 1058 22 0 0 0 chrX 62053355 62053377 -104596919 + AT_rich Low_complexity Low_complexity 1 22 0 6 1058 23 0 0 0 chrX 62053455 62053478 -104596818 + AT_rich Low_complexity Low_complexity 1 23 0 6 1058 691 132 9 0 chrX 62053685 62053791 -104596505 + U6 snRNA snRNA 1 107 0 6 1058 14537 155 16 15 chrX 62053800 62056298 -104593998 + L1_Mus2 LINE L1 675 3180 -2703 6 1058 225 0 0 0 chrX 62056298 62056323 -104593973 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 6 1058 20990 147 12 15 chrX 62056323 62056461 -104593835 + L1_Mus2 LINE L1 3181 3326 -2557 6 1058 2855 45 42 0 chrX 62056461 62056816 -104593480 + L1Md_F2 LINE L1 6197 6566 -16 6 1058 20990 126 13 12 chrX 62056816 62060047 -104590249 + L1_Mus2 LINE L1 3327 6558 -8 6 1058 228 217 0 0 chrX 62060302 62060348 -104589948 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1058 23 33 0 0 chrX 62060475 62060505 -104589791 + AT_rich Low_complexity Low_complexity 1 30 0 6 1058 2931 75 7 48 chrX 62061361 62061798 -104588498 + BGLII LTR ERVK 1 419 -2 7 1058 344 263 114 47 chrX 62061801 62062056 -104588240 - L1MA7 LINE L1 -57 6234 5963 7 1058 313 316 61 17 chrX 62062120 62062300 -104587996 - L1M2 LINE L1 -2756 3387 3200 7 1058 538 352 10 17 chrX 62062387 62062607 -104587689 - B3A SINE B2 -5 211 1 7 1058 239 262 12 48 chrX 62063477 62063561 -104586735 - Lx8 LINE L1 -2 7471 7391 7 1058 594 269 60 6 chrX 62064727 62064895 -104585401 + ORR1D2 LTR MaLR 1 177 -193 7 1058 8450 99 9 31 chrX 62064903 62066204 -104584092 - L1_Mm LINE L1 -1328 4555 3284 7 1058 4642 130 11 8 chrX 62066195 62066302 -104583994 + L1_Mus2 LINE L1 5132 5234 -649 7 1058 231 36 0 0 chrX 62066302 62066330 -104583966 + (TA)n Simple_repeat Simple_repeat 2 29 0 7 1058 6823 111 6 4 chrX 62066330 62067649 -104582647 + L1_Mus2 LINE L1 5235 6563 -3 7 1058 7877 237 50 26 chrX 62067897 62071164 -104579132 + L1_Mur3 LINE L1 17 2926 -2954 7 1058 1409 185 4 125 chrX 62071164 62071418 -104578878 - RMER17C LTR ERVK -3 407 185 8 1058 1200 60 0 0 chrX 62071418 62071584 -104578712 + (GA)n Simple_repeat Simple_repeat 1 166 0 8 1058 1409 185 4 125 chrX 62071584 62071792 -104578504 - RMER17C LTR ERVK -226 184 1 8 1058 7877 194 43 34 chrX 62071792 62072182 -104578114 + L1_Mur3 LINE L1 2927 3321 -2559 7 1058 2718 128 38 42 chrX 62072189 62072661 -104577635 - MT2C_Mm LTR ERVL -5 470 1 8 1058 8134 39 2 7 chrX 62072677 62072896 -104577400 + L1Md_F2 LINE L1 5593 5811 -771 8 1058 7659 43 26 3 chrX 62072896 62073833 -104576463 - RLTR13A2 LTR ERVK 0 958 1 8 1058 8134 39 2 7 chrX 62073833 62074608 -104575688 + L1Md_F2 LINE L1 5812 6582 0 8 1058 509 211 0 9 chrX 62074612 62074727 -104575569 + L1_Mur3 LINE L1 3330 3443 -2437 7 1058 1028 173 12 147 chrX 62074728 62074979 -104575317 + URR1B DNA MER1_type 1 217 -8 8 1058 318 232 52 67 chrX 62074861 62074995 -104575301 - CYRA11_Mm Unknown Y-chromosome -317 300 169 8 1058 5242 252 26 111 chrX 62075061 62075905 -104574391 + L1_Mur1 LINE L1 3477 4283 -1603 8 1058 516 116 0 0 chrX 62075905 62075991 -104574305 + (CA)n Simple_repeat Simple_repeat 2 87 0 8 1058 5242 252 26 111 chrX 62075991 62076283 -104574013 + L1_Mur1 LINE L1 4284 4567 -1319 8 1058 297 280 100 27 chrX 62076283 62076393 -104573903 + B1_Mm SINE Alu 29 146 -1 8 1058 5242 252 26 111 chrX 62076393 62077036 -104573260 + L1_Mur1 LINE L1 4568 5196 -690 8 1058 230 0 33 0 chrX 62077036 62077066 -104573230 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 1058 5242 252 26 111 chrX 62077066 62077278 -104573018 + L1_Mur1 LINE L1 5197 5398 -488 8 1058 601 215 8 0 chrX 62077274 62077404 -104572892 + Lx6 LINE L1 5617 5747 -133 9 1058 1025 157 18 0 chrX 62077404 62077570 -104572726 - B2_Mm2 SINE B2 -26 169 1 9 1058 2300 225 72 4 chrX 62077605 62078012 -104572284 + Lx6 LINE L1 6305 6748 -712 9 1058 255 61 0 0 chrX 62078012 62078045 -104572251 + (CAAAG)n Simple_repeat Simple_repeat 2 34 0 9 1058 2300 225 72 4 chrX 62078045 62078154 -104572142 + Lx6 LINE L1 6749 6856 -604 9 1058 364 285 36 6 chrX 62078687 62078853 -104571443 - L1MA4A LINE L1 -371 5932 5762 9 1058 329 288 69 32 chrX 62079003 62079504 -104570792 - L1MA4A LINE L1 -169 5678 5136 9 1058 333 0 0 0 chrX 62079619 62079656 -104570640 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 1058 2576 35 119 0 chrX 62080243 62080562 -104569734 + IAPEY2_LTR LTR ERVK 1 357 0 9 1058 6783 174 19 12 chrX 62080583 62081856 -104568440 - Lx4B LINE L1 -6 7052 5771 9 1058 21 0 0 0 chrX 62082180 62082201 -104568095 + AT_rich Low_complexity Low_complexity 1 21 0 9 1058 28 61 0 0 chrX 62082389 62082438 -104567858 + AT_rich Low_complexity Low_complexity 1 49 0 9 1058 695 161 8 0 chrX 62082454 62082584 -104567712 + Lx2 LINE L1 6866 6996 -1 1 1058 3144 174 6 8 chrX 62082617 62083137 -104567159 + RLTR21 LTR ERVK 1 519 -1053 1 1058 230 282 112 41 chrX 62083263 62083459 -104566837 + L1M5 LINE L1 3788 3997 -2149 1 1058 576 319 9 29 chrX 62083479 62083689 -104566607 - MLT1A1 LTR MaLR -21 387 182 1 1058 192 77 0 0 chrX 62083734 62083760 -104566536 + (TTG)n Simple_repeat Simple_repeat 1 26 0 1 1058 5542 167 21 1 chrX 62083864 62084818 -104565478 - Lx3B LINE L1 -370 6603 5631 1 1058 550 290 84 67 chrX 62086201 62086500 -104563796 - MTEb LTR MaLR -13 366 63 1 1058 388 279 57 0 chrX 62086657 62086779 -104563517 - RCHARR1 DNA MER1_type 0 974 846 1 1058 8229 94 2 3 chrX 62086781 62087911 -104562385 + L1_Mm LINE L1 4458 5586 -297 1 1058 7607 68 4 0 chrX 62087911 62088890 -104561406 + L1Md_F2 LINE L1 5588 6570 -12 1 1058 8229 94 2 3 chrX 62088890 62088917 -104561379 + L1_Mm LINE L1 5587 5613 -270 1 1058 1297 304 94 28 chrX 62088920 62089588 -104560708 - RCHARR1 DNA MER1_type -169 805 94 1 1058 26 30 0 0 chrX 62089592 62089625 -104560671 + AT_rich Low_complexity Low_complexity 1 33 0 1 1058 4364 205 18 29 chrX 62089625 62090595 -104559701 - Lx3C LINE L1 -2 6974 6016 1 1058 22 0 0 0 chrX 62090624 62090646 -104559650 + AT_rich Low_complexity Low_complexity 1 22 0 1 1058 2474 162 19 0 chrX 62090744 62091239 -104559057 - Lx3C LINE L1 -1035 6023 5515 1 1058 24 32 0 0 chrX 62091305 62091336 -104558960 + AT_rich Low_complexity Low_complexity 1 31 0 1 1058 279 386 26 0 chrX 62091374 62091488 -104558808 - B3 SINE B2 -86 130 14 1 1058 24 0 0 0 chrX 62092595 62092619 -104557677 + AT_rich Low_complexity Low_complexity 1 24 0 1 1058 225 296 158 18 chrX 62093173 62093338 -104556958 - Tigger13a DNA MER2_type -339 432 245 1 1058 313 332 72 75 chrX 62093422 62093715 -104556581 - B4A SINE B4 0 292 1 1 1058 280 288 17 0 chrX 62093740 62093833 -104556463 - MLT1A0 LTR MaLR -33 341 234 1 1058 256 394 11 0 chrX 62093928 62094022 -104556274 - PB1D10 SINE Alu -22 95 1 1 1058 300 367 47 0 chrX 62094022 62094092 -104556204 - B4A SINE B4 -206 86 11 1 1058 270 325 103 0 chrX 62094097 62094223 -104556073 - MLT1A0 LTR MaLR -208 157 19 1 1058 6809 40 0 0 chrX 62094746 62095565 -104554731 - L1Md_A LINE L1 0 6582 5764 1 1058 229 26 26 26 chrX 62095730 62095769 -104554527 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1058 216 0 0 0 chrX 62096570 62096594 -104553702 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1 1058 402 39 0 0 chrX 62096657 62096709 -104553587 + (T)n Simple_repeat Simple_repeat 1 52 0 1 1058 29 47 0 0 chrX 62097318 62097361 -104552935 + AT_rich Low_complexity Low_complexity 1 43 0 1 1058 32511 65 1 7 chrX 62097398 62102481 -104547815 - L1Md_F3 LINE L1 -15 6569 1519 1 1058 2198 203 76 4 chrX 62102467 62102974 -104547322 - L1Md_F3 LINE L1 -5753 971 446 1 1058 2802 122 2 5 chrX 62102974 62103409 -104546887 - L1_Mus4 LINE L1 -16 6620 6187 1 1058 27097 122 6 20 chrX 62103765 62106523 -104543773 - L1_Mus2 LINE L1 -1 6565 3870 1 1058 1001 136 0 13 chrX 62106523 62106672 -104543624 - B1_Mus1 SINE Alu 0 148 2 1 1058 27097 125 8 28 chrX 62106672 62109134 -104541162 - L1_Mus2 LINE L1 -2014 3869 1437 1 1058 472 235 10 19 chrX 62109271 62109375 -104540921 - Lx5 LINE L1 -671 6379 6277 1 1058 3104 235 6 6 chrX 62109378 62110054 -104540242 + Lx5 LINE L1 6367 7042 -8 1 1058 210 208 0 0 chrX 62110096 62110149 -104540147 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 1 1058 25 75 0 0 chrX 62111061 62111114 -104539182 + AT_rich Low_complexity Low_complexity 1 53 0 1 1058 377 345 62 33 chrX 62111249 62111459 -104538837 + ID_B1 SINE B4 2 217 -7 1 1058 25 51 0 0 chrX 62111461 62111500 -104538796 + AT_rich Low_complexity Low_complexity 1 39 0 1 1058 303 332 104 50 chrX 62111550 62111791 -104538505 - L1M5 LINE L1 -419 5821 5568 1 1058 21 0 0 0 chrX 62111998 62112019 -104538277 + AT_rich Low_complexity Low_complexity 1 21 0 1 1058 22 0 0 0 chrX 62112060 62112082 -104538214 + AT_rich Low_complexity Low_complexity 1 22 0 1 1058 610 320 78 38 chrX 62112286 62112365 -104537931 - Lx5 LINE L1 -54 5826 5755 1 1058 183 42 0 0 chrX 62112365 62112389 -104537907 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1058 610 300 105 48 chrX 62112389 62112763 -104537533 - Lx5 LINE L1 -367 5789 5358 1 1058 3059 161 12 0 chrX 62112763 62113277 -104537019 - Lx LINE L1 -5 6649 6130 1 1058 296 300 105 48 chrX 62113277 62113328 -104536968 - Lx5 LINE L1 -766 5390 5329 1 1058 435 304 54 4 chrX 62113347 62113426 -104536870 - L1M2 LINE L1 -1447 4696 4610 1 1058 2082 63 11 0 chrX 62113426 62113696 -104536600 + L1Md_F2 LINE L1 6296 6568 -14 1 1058 435 304 54 4 chrX 62113696 62113893 -104536403 - L1M2 LINE L1 -1534 4609 4408 1 1058 21 36 0 0 chrX 62114654 62114682 -104535614 + AT_rich Low_complexity Low_complexity 1 28 0 1 1058 519 17 0 0 chrX 62114841 62114901 -104535395 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 1058 1239 252 12 61 chrX 62115160 62115486 -104534810 - ORR1D-int LTR MaLR -135 1235 926 1 1058 1186 282 78 22 chrX 62115487 62115951 -104534345 + Lx7 LINE L1 6976 7465 -231 1 1058 255 302 61 38 chrX 62115989 62116120 -104534176 + Lx7 LINE L1 7561 7694 -2 1 1058 26 0 0 0 chrX 62117093 62117119 -104533177 + AT_rich Low_complexity Low_complexity 1 26 0 1 1058 1370 190 109 124 chrX 62117459 62117927 -104532369 - RMER6B LTR ERVK 0 461 1 1 1058 28 29 0 0 chrX 62117991 62118026 -104532270 + AT_rich Low_complexity Low_complexity 1 35 0 1 1058 281 335 40 7 chrX 62118167 62118317 -104531979 + MLT1E1A LTR MaLR 123 277 -377 1 1058 343 377 72 14 chrX 62118350 62118573 -104531723 + MLT1E1A LTR MaLR 420 655 -25 1 1058 255 195 250 24 chrX 62118688 62118772 -104531524 + MLT1C LTR MaLR 6 108 -359 1 1058 23 0 0 0 chrX 62118841 62118864 -104531432 + AT_rich Low_complexity Low_complexity 1 23 0 1 1058 1811 173 114 0 chrX 62119162 62119514 -104530782 + ORR1B1 LTR MaLR 1 392 -2 1 1058 1158 186 29 111 chrX 62119550 62119901 -104530395 + RLTRETN_Mm LTR ERVK 1 322 0 1 1058 6248 132 22 89 chrX 62119905 62120738 -104529558 + MMETn-int LTR ERVK 3 737 -4107 1 1058 315 0 0 0 chrX 62120738 62120773 -104529523 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1058 6248 132 22 89 chrX 62120773 62121189 -104529107 + MMETn-int LTR ERVK 738 1169 -3675 1 1058 4968 178 49 69 chrX 62121187 62123746 -104526550 + MMETn-int LTR ERVK 2356 4085 -3321 1 1058 5826 142 88 9 chrX 62123739 62124753 -104525543 + ETnERV2-int LTR ERVK 6227 7208 -198 1 1058 409 246 249 22 chrX 62124755 62124984 -104525312 + RLTR13D6 LTR ERVK 160 440 -462 1 1058 482 221 48 41 chrX 62124984 62125130 -104525166 + MMETn-int LTR ERVK 4698 4844 0 1 1058 1103 184 17 127 chrX 62125130 62125492 -104524804 + RLTRETN_Mm LTR ERVK 1 322 0 1 1058 21 57 0 0 chrX 62126268 62126303 -104523993 + AT_rich Low_complexity Low_complexity 1 35 0 1 1058 250 359 89 69 chrX 62127526 62127788 -104522508 - B4 SINE B4 -11 281 44 1 1058 27 49 0 0 chrX 62127878 62127919 -104522377 + AT_rich Low_complexity Low_complexity 1 41 0 1 132 269 196 0 0 chrX 62128101 62128152 -104522144 - MTE2b LTR MaLR 0 379 329 1 1059 246 398 29 0 chrX 62128254 62128357 -104521939 + Charlie1b DNA MER1_type 10 115 -408 1 1059 270 0 0 0 chrX 62128381 62128411 -104521885 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1059 1650 355 19 44 chrX 62128530 62129340 -104520956 + Lx7 LINE L1 6441 7237 -459 1 1059 2950 198 14 3 chrX 62129340 62129907 -104520389 + RMER15 LTR ERVL 1 573 -2 1 1059 1650 355 19 44 chrX 62129907 62129921 -104520375 + Lx7 LINE L1 7238 7245 -451 1 1059 1991 211 62 20 chrX 62129921 62130424 -104519872 - RLTR28 LTR ERVL 0 524 1 1 1059 1650 355 19 44 chrX 62130424 62130482 -104519814 + Lx7 LINE L1 7246 7302 -394 1 1059 2657 99 3 15 chrX 62130476 62130866 -104519430 + L1_Mm LINE L1 5244 5628 -255 1 1059 4657 111 55 1 chrX 62130866 62131573 -104518723 + L1_Mus4 LINE L1 5889 6633 -3 1 1059 234 116 0 0 chrX 62132207 62132250 -104518046 + (A)n Simple_repeat Simple_repeat 1 43 0 1 1059 23 54 0 0 chrX 62133126 62133163 -104517133 + AT_rich Low_complexity Low_complexity 1 37 0 1 1059 267 104 0 0 chrX 62133341 62133389 -104516907 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 1059 21 0 0 0 chrX 62133865 62133886 -104516410 + AT_rich Low_complexity Low_complexity 1 21 0 1 1059 1481 285 68 101 chrX 62134810 62135707 -104514589 + Lx9 LINE L1 6758 7624 -20 1 1059 260 314 96 74 chrX 62135864 62136094 -104514202 - L2 LINE L2 -1316 2103 1869 1 1059 298 197 121 0 chrX 62136308 62136374 -104513922 + B3A SINE B2 2 75 -123 1 1059 417 39 0 0 chrX 62136440 62136491 -104513805 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1059 37963 30 1 0 chrX 62136884 62143665 -104506631 - L1Md_T LINE L1 -3 6582 1 1 1059 23 0 0 0 chrX 62143918 62143941 -104506355 + AT_rich Low_complexity Low_complexity 1 23 0 1 1059 6976 94 11 6 chrX 62144137 62145383 -104504913 - L1_Mus1 LINE L1 -2 6565 5312 1 1059 15956 157 16 67 chrX 62145391 62152111 -104498185 - L1Md_F2 LINE L1 -18 6564 432 1 1059 189 121 0 0 chrX 62152621 62152654 -104497642 + (CCA)n Simple_repeat Simple_repeat 3 35 0 1 1059 22 0 0 0 chrX 62152766 62152788 -104497508 + AT_rich Low_complexity Low_complexity 1 22 0 1 1059 3228 51 2 0 chrX 62153021 62153416 -104496880 - MTA_Mm LTR MaLR 0 396 1 1 1059 6408 45 0 0 chrX 62153416 62154231 -104496065 - MTA_Mm-int LTR MaLR 0 1098 284 1 1059 1571 53 5 0 chrX 62154238 62154444 -104495852 - MTA_Mm LTR MaLR -189 207 1 1 1059 504 42 14 0 chrX 62154477 62154548 -104495748 - B1_Mur4 SINE Alu 0 150 79 1 1059 1279 269 27 76 chrX 62154567 62155053 -104495243 - Lx6 LINE L1 -17 7443 6982 1 1059 26 0 0 0 chrX 62155174 62155200 -104495096 + AT_rich Low_complexity Low_complexity 1 26 0 1 1059 210 91 0 0 chrX 62155942 62155975 -104494321 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 1059 864 294 116 31 chrX 62155975 62156329 -104493967 + Lx8 LINE L1 7085 7468 -5 1 1059 328 335 61 24 chrX 62158060 62158225 -104492071 - MIR SINE MIR -87 175 5 1 1059 434 331 19 13 chrX 62159806 62159965 -104490331 - Lx8 LINE L1 -740 6733 6574 1 1059 254 335 69 120 chrX 62160034 62160251 -104490045 - Charlie1b DNA MER1_type -317 206 1 1 1059 21 0 0 0 chrX 62160907 62160928 -104489368 + AT_rich Low_complexity Low_complexity 1 21 0 1 1059 658 313 143 37 chrX 62161150 62161605 -104488691 - Lx8 LINE L1 -2 7471 6969 1 1059 491 314 46 10 chrX 62161603 62161799 -104488497 + Lx8 LINE L1 6210 6412 -1061 1 1059 5038 134 58 13 chrX 62161797 62162873 -104487423 + L1Md_F2 LINE L1 273 1344 -5380 1 1059 8407 83 4 1 chrX 62166001 62167144 -104483152 + L1Md_F2 LINE L1 4439 5585 -298 1 1059 7001 98 9 12 chrX 62167145 62168141 -104482155 + L1Md_F2 LINE L1 5587 6579 -3 1 1059 776 325 55 40 chrX 62168141 62168557 -104481739 + Lx8 LINE L1 6402 6811 -885 1 1059 674 355 101 22 chrX 62170453 62170949 -104479347 - L2 LINE L2 -374 3045 2511 1 1059 240 300 0 0 chrX 62170966 62171016 -104479280 + RSINE1 SINE B4 3 52 -113 1 1059 1109 69 7 0 chrX 62171151 62171296 -104479000 + LTRIS_Mm LTR ERV1 337 482 0 2 1059 458 276 0 33 chrX 62171296 62171406 -104478890 - MT2A LTR ERVL -427 106 1 2 1059 210 167 0 0 chrX 62171897 62171933 -104478363 + T-rich Low_complexity Low_complexity 1 36 0 2 1059 271 154 0 55 chrX 62171936 62171991 -104478305 - B1_Mus2 SINE Alu 0 147 96 2 1059 564 15 0 0 chrX 62172003 62172068 -104478228 + (TA)n Simple_repeat Simple_repeat 2 66 0 2 1059 285 29 0 0 chrX 62173264 62173298 -104476998 + (TTAA)n Simple_repeat Simple_repeat 4 37 0 2 1059 904 264 0 14 chrX 62173372 62173587 -104476709 + B3 SINE B2 2 213 -3 2 1059 22 0 0 0 chrX 62173935 62173957 -104476339 + AT_rich Low_complexity Low_complexity 1 22 0 2 1059 243 0 0 0 chrX 62174092 62174119 -104476177 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1059 1108 82 0 0 chrX 62174249 62174395 -104475901 + B1_Mm SINE Alu 1 146 -1 2 1059 536 15 29 0 chrX 62174397 62174465 -104475831 + (GAAA)n Simple_repeat Simple_repeat 3 72 0 2 1059 2794 214 50 10 chrX 62174747 62175364 -104474932 + RLTR26 LTR ERVK 1 642 0 2 1059 213 65 0 0 chrX 62175419 62175450 -104474846 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1059 4492 122 62 16 chrX 62175848 62176619 -104473677 - RMER17D2 LTR ERVK 0 809 3 2 1059 835 329 63 45 chrX 62177061 62177440 -104472856 - MTD LTR MaLR -14 405 20 2 1059 25 31 0 0 chrX 62177642 62177674 -104472622 + AT_rich Low_complexity Low_complexity 1 32 0 2 1059 342 0 0 0 chrX 62177735 62177773 -104472523 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 1059 227 235 48 10 chrX 62177797 62177900 -104472396 + Lx9 LINE L1 7490 7596 -48 2 1059 447 296 59 12 chrX 62177958 62178214 -104472082 + L1M2 LINE L1 5060 5327 -816 2 1059 1038 191 6 11 chrX 62178556 62178736 -104471560 + URR1B DNA MER1_type 1 179 -46 2 1059 2228 116 21 45 chrX 62178736 62179116 -104471180 + BGLII LTR ERVK 1 371 -50 2 1059 460 328 23 0 chrX 62179122 62179253 -104471043 - B3A SINE B2 -30 168 35 2 1059 23 0 0 0 chrX 62179302 62179325 -104470971 + AT_rich Low_complexity Low_complexity 1 23 0 2 1059 380 392 81 50 chrX 62179498 62179756 -104470540 - B4 SINE B4 -2 290 25 2 1059 945 323 81 9 chrX 62179787 62180134 -104470162 - MTD LTR MaLR -38 381 10 2 1059 1882 283 87 73 chrX 62180148 62181149 -104469147 - MTD-int LTR MaLR -286 1506 384 2 1059 810 100 19 45 chrX 62181449 62181606 -104468690 - L1_Mus3 LINE L1 -7 6631 6479 2 1059 237 325 61 0 chrX 62181711 62181874 -104468422 + L1M2c LINE L1 1794 1966 -4823 2 1059 351 185 15 0 chrX 62181969 62182034 -104468262 - MTC LTR MaLR -37 384 319 2 1059 1071 158 16 0 chrX 62182036 62182226 -104468070 - RLTR12B LTR ERVK -335 193 1 2 1059 8425 41 1 1 chrX 62182533 62183565 -104466731 - L1Md_T LINE L1 0 6582 5584 2 1059 404 289 98 51 chrX 62183590 62183805 -104466491 + L2 LINE L2 1273 1497 -1922 2 1059 316 340 148 42 chrX 62184423 62184807 -104465489 + MLT1C LTR MaLR 34 458 -9 2 1059 21 0 0 0 chrX 62184830 62184851 -104465445 + AT_rich Low_complexity Low_complexity 1 21 0 2 1059 23 54 0 0 chrX 62184967 62185004 -104465292 + AT_rich Low_complexity Low_complexity 1 37 0 2 1059 3954 69 4 0 chrX 62185318 62185826 -104464470 + L1_Mus1 LINE L1 6057 6566 -1 2 1059 3605 62 20 8 chrX 62186291 62186781 -104463515 + LTRIS2 LTR ERV1 69 564 0 2 1059 1098 142 72 14 chrX 62186927 62187148 -104463148 + RLTR1B-int LTR ERV1 60 293 -3006 2 1059 963 156 60 16 chrX 62187493 62187675 -104462621 + RMER16-int LTR ERVK 142 331 -5075 2 1059 4348 150 39 19 chrX 62187652 62188401 -104461895 + RMER16-int LTR ERVK 681 1444 -3962 2 1059 9553 127 131 48 chrX 62188392 62190913 -104459383 + RLTR1B-int LTR ERV1 760 3996 -1067 2 1059 1026 200 51 0 chrX 62191130 62191365 -104458931 + RLTR1B-int LTR ERV1 4791 5037 -26 2 1059 3629 60 20 8 chrX 62191365 62191855 -104458441 + LTRIS2 LTR ERV1 69 564 0 2 1059 1966 203 106 22 chrX 62191919 62192408 -104457888 + RMER6C LTR ERVK 1 530 -160 2 1059 1784 217 27 35 chrX 62192403 62192808 -104457488 - RLTR9B2 LTR ERVK -18 402 1 2 1059 921 156 12 0 chrX 62192810 62192970 -104457326 + RMER6C LTR ERVK 529 690 0 2 1059 686 308 6 0 chrX 62193030 62193199 -104457097 - ID_B1 SINE B4 -53 171 2 2 1059 201 388 59 15 chrX 62193931 62194067 -104456229 - L2b LINE L2 -5 3370 3229 2 1059 507 33 0 0 chrX 62195158 62195219 -104455077 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 2 1059 423 0 0 0 chrX 62196167 62196214 -104454082 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1059 479 283 158 25 chrX 62196369 62196565 -104453731 + B4A SINE B4 2 223 -69 2 1059 245 307 8 67 chrX 62196748 62196824 -104453472 + MIRb SINE MIR 79 154 -122 2 1059 2960 81 5 16 chrX 62196824 62197250 -104453046 - BGLII LTR ERVK 0 421 1 2 1059 245 299 9 76 chrX 62197250 62197287 -104453009 + MIRb SINE MIR 151 185 -83 2 1059 991 82 19 12 chrX 62197539 62197699 -104452597 + L1_Mus4 LINE L1 6472 6632 -4 2 1059 230 245 0 0 chrX 62198002 62198055 -104452241 + GA-rich Low_complexity Low_complexity 1 53 0 2 1059 1648 102 3 131 chrX 62198291 62198597 -104451699 + ORR1A2 LTR MaLR 3 269 -58 2 1059 1441 331 26 6 chrX 62199151 62199689 -104450607 + Lx8 LINE L1 6372 6920 -553 2 1059 405 0 0 0 chrX 62199758 62199803 -104450493 + (TTA)n Simple_repeat Simple_repeat 1 45 0 2 1059 630 238 8 103 chrX 62199868 62200121 -104450175 - L1_Mur1 LINE L1 -6753 229 1 2 1059 2456 162 153 6 chrX 62200556 62201066 -104449230 - RMER4B LTR ERVK 0 585 1 2 1059 1049 37 22 0 chrX 62201153 62201289 -104449007 + (GAGAA)n Simple_repeat Simple_repeat 1 139 0 2 1059 186 43 0 0 chrX 62202194 62202217 -104448079 + (GAA)n Simple_repeat Simple_repeat 2 24 0 2 1059 234 196 59 22 chrX 62202421 62202610 -104447686 + (TA)n Simple_repeat Simple_repeat 1 195 0 2 1059 467 347 77 26 chrX 62203810 62204005 -104446291 + B4A SINE B4 29 233 -59 2 1059 429 333 31 0 chrX 62204073 62204202 -104446094 + B3 SINE B2 70 202 -14 2 1059 938 251 108 12 chrX 62204203 62204665 -104445631 + Lx5 LINE L1 6102 6804 -656 2 1059 367 268 268 0 chrX 62204633 62204745 -104445551 + Lx5 LINE L1 6457 6598 -452 2 1059 36 40 0 0 chrX 62204855 62204905 -104445391 + AT_rich Low_complexity Low_complexity 1 50 0 2 1059 435 19 0 0 chrX 62205003 62205055 -104445241 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1059 5882 52 5 14 chrX 62205262 62206005 -104444291 + L1_Mus1 LINE L1 5831 6567 0 2 1059 349 279 9 0 chrX 62206046 62206157 -104444139 + GA-rich Low_complexity Low_complexity 2 113 0 2 1059 635 239 75 62 chrX 62206167 62206496 -104443800 + Lx5 LINE L1 6666 6995 -2 2 1059 435 206 0 0 chrX 62206654 62206732 -104443564 + (CATATA)n Simple_repeat Simple_repeat 4 81 0 2 1059 225 0 0 0 chrX 62206732 62206757 -104443539 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 1059 435 206 0 0 chrX 62206757 62206785 -104443511 + (CATATA)n Simple_repeat Simple_repeat 4 31 0 2 1059 625 12 48 0 chrX 62206792 62206876 -104443420 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 2 1059 290 264 36 18 chrX 62208300 62208412 -104441884 + Lx6 LINE L1 523 636 -6450 2 1059 2434 197 9 16 chrX 62208413 62208966 -104441330 + Lx6 LINE L1 1575 2123 -3754 2 1059 242 237 19 67 chrX 62208966 62209070 -104441226 - RLTR9A LTR ERVK 0 368 270 2 1059 227 154 26 0 chrX 62209215 62209254 -104441042 - RLTR9A LTR ERVK -328 40 1 2 1059 1650 175 11 17 chrX 62209254 62209603 -104440693 + Lx6 LINE L1 2118 2464 -3413 2 1059 6003 146 11 3 chrX 62209601 62210606 -104439690 - L1_Mus3 LINE L1 -644 5239 4227 2 1059 6255 124 58 3 chrX 62210587 62211931 -104438365 + L1_Mus3 LINE L1 5212 6631 -7 2 1059 5467 245 105 74 chrX 62211922 62216758 -104433538 + Lx6 LINE L1 2458 7442 -18 2 1059 6502 177 13 9 chrX 62216776 62217964 -104432332 - Lx2B LINE L1 -75 6925 5768 2 1059 210 71 0 0 chrX 62218031 62218059 -104432237 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 1059 2836 103 5 5 chrX 62218794 62219215 -104431081 + BGLII LTR ERVK 1 421 0 2 1059 303 373 78 12 chrX 62219417 62219672 -104430624 + MLT1A0 LTR MaLR 94 365 0 2 1059 532 356 74 10 chrX 62220065 62220471 -104429825 + Tigger6a DNA MER2_type 27 458 -625 2 1059 30 0 0 0 chrX 62220507 62220537 -104429759 + AT_rich Low_complexity Low_complexity 1 30 0 2 1059 243 0 0 0 chrX 62220537 62220564 -104429732 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1059 234 0 0 0 chrX 62220774 62220800 -104429496 + (CTA)n Simple_repeat Simple_repeat 2 27 0 2 1059 324 0 0 0 chrX 62220800 62220836 -104429460 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1059 346 342 54 0 chrX 62220881 62221030 -104429266 - MER58A DNA MER1_type -19 205 49 2 1059 30 89 0 0 chrX 62221547 62221626 -104428670 + AT_rich Low_complexity Low_complexity 1 79 0 2 1059 297 0 0 0 chrX 62221932 62221965 -104428331 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 2 1059 835 295 8 4 chrX 62221970 62222208 -104428088 - Lx6 LINE L1 -170 7290 7052 2 1059 2133 104 7 3 chrX 62222914 62223222 -104427074 - L1_Mus3 LINE L1 0 6638 6330 2 1059 6236 216 23 21 chrX 62223352 62224774 -104425522 - Lx5 LINE L1 0 7050 5672 2 1059 22449 176 21 24 chrX 62224769 62230759 -104419537 + Lx2 LINE L1 362 6331 -666 2 1059 4467 65 7 3 chrX 62230795 62231367 -104418929 - L1Md_F2 LINE L1 -21 6561 5988 2 1059 271 139 0 0 chrX 62231368 62231411 -104418885 + L1_Mm LINE L1 4140 4182 -1701 2 1059 1933 172 15 12 chrX 62231403 62231804 -104418492 - Lx5 LINE L1 -578 5299 4898 2 1059 318 210 123 0 chrX 62231813 62231894 -104418402 + MER58A DNA MER1_type 46 136 -88 2 1059 4354 163 59 25 chrX 62231965 62232835 -104417461 - RLTR13D6 LTR ERVK -3 899 1 2 1059 859 187 169 4 chrX 62232872 62233109 -104417187 + MTC LTR MaLR 1 391 -30 2 1059 5324 115 17 2 chrX 62233132 62233954 -104416342 - L1_Mus3 LINE L1 -5 6633 5800 2 1059 429 54 0 0 chrX 62233954 62234010 -104416286 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1059 21893 153 20 6 chrX 62234010 62235821 -104414475 - L1VL2 LINE L1 -649 5234 3402 2 1059 3126 53 8 2 chrX 62235821 62236215 -104414081 - MTA_Mm LTR MaLR 0 396 1 2 1059 21893 159 19 34 chrX 62236215 62239269 -104411027 - L1VL2 LINE L1 -2482 3401 398 2 1059 665 209 47 9 chrX 62239781 62239940 -104410356 - Lx9 LINE L1 -1 7643 7486 2 1059 2927 48 50 5 chrX 62239940 62240319 -104409977 - MTA_Mm LTR MaLR 0 396 1 2 1059 665 209 47 9 chrX 62240319 62240371 -104409925 - Lx9 LINE L1 -159 7485 7425 2 1059 22 0 0 0 chrX 62241489 62241511 -104408785 + AT_rich Low_complexity Low_complexity 1 22 0 2 1059 743 294 54 49 chrX 62241797 62242226 -104408070 + L1MA4 LINE L1 5592 6022 -278 3 1059 360 298 53 47 chrX 62242936 62243105 -104407191 - RMER15 LTR ERVL -17 558 389 3 1059 229 232 0 28 chrX 62243726 62243797 -104406499 - Lx8 LINE L1 -11 7462 7394 3 1059 23 33 0 0 chrX 62244676 62244706 -104405590 + AT_rich Low_complexity Low_complexity 1 30 0 3 1059 432 0 0 0 chrX 62245072 62245120 -104405176 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1059 1350 247 62 0 chrX 62245732 62246072 -104404224 + L1_Rod LINE L1 746 1106 -6502 3 1059 1160 233 87 38 chrX 62246128 62246472 -104403824 + L1_Rod LINE L1 2121 2481 -3366 3 1059 549 0 0 0 chrX 62246472 62246533 -104403763 + (TA)n Simple_repeat Simple_repeat 1 61 0 3 1059 6143 83 5 9 chrX 62246563 62247404 -104402892 - L1_Mus2 LINE L1 0 6566 5730 3 1059 3884 238 56 93 chrX 62247395 62249191 -104401105 + Lx6 LINE L1 5499 7219 -241 3 1059 41098 5 0 1 chrX 62249180 62255768 -104394528 - L1Md_A LINE L1 0 6582 1 3 1059 1063 244 38 11 chrX 62255770 62256031 -104394265 + Lx6 LINE L1 7189 7456 -4 3 1059 630 257 47 58 chrX 62256025 62256703 -104393593 + L1_Rod LINE L1 2679 3650 -2197 3 1059 398 213 148 0 chrX 62256713 62256835 -104393461 + L1_Rod LINE L1 5657 5796 -51 3 1059 4059 259 76 7 chrX 62256908 62258147 -104392149 + Lx9 LINE L1 6314 7637 -7 3 1059 654 311 113 24 chrX 62258159 62258663 -104391633 - Lx9 LINE L1 -15 7629 7081 3 132 7229 101 20 3 chrX 62258722 62260088 -104390208 - L1_Mus3 LINE L1 0 6638 5250 3 1060 1634 310 38 10 chrX 62260074 62260684 -104389612 - Lx9 LINE L1 -593 7051 6425 3 1060 12185 68 6 1 chrX 62260689 62263026 -104387270 - L1Md_F2 LINE L1 0 6582 4235 3 1060 27783 137 16 17 chrX 62263083 62267083 -104383213 + L1_Mus2 LINE L1 359 4369 -1514 3 1060 432 0 0 0 chrX 62267083 62267131 -104383165 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1060 27783 132 11 15 chrX 62267131 62267877 -104382419 + L1_Mus2 LINE L1 4370 5121 -762 3 1060 905 147 28 0 chrX 62267877 62268020 -104382276 + B1_Mm SINE Alu 1 147 0 3 1060 27783 105 6 5 chrX 62268020 62269482 -104380814 + L1_Mus2 LINE L1 5122 6561 -5 3 1060 294 273 106 0 chrX 62270833 62270965 -104379331 + L1M2 LINE L1 4706 4851 -1292 3 1060 571 275 86 9 chrX 62270962 62271182 -104379114 + L1MA8 LINE L1 6002 6238 -53 3 1060 1910 125 38 41 chrX 62272177 62272520 -104377776 - Lx LINE L1 -15 6639 6298 3 1060 4506 132 21 7 chrX 62272527 62273267 -104377029 + Lx LINE L1 5543 6292 -362 3 1060 5161 180 12 17 chrX 62275122 62275770 -104374526 - Lx2 LINE L1 -2 6995 6355 3 1060 1261 101 22 0 chrX 62275770 62275949 -104374347 - B2_Mm2 SINE B2 -10 185 3 3 1060 5161 180 12 17 chrX 62275949 62276289 -104374007 - Lx2 LINE L1 -643 6354 6012 3 1060 7767 170 40 6 chrX 62276542 62278246 -104372050 - Lx4A LINE L1 -3 7055 5282 3 1060 7453 155 36 14 chrX 62278277 62280596 -104369700 - Lx3B LINE L1 -1 6972 4596 3 1060 1433 84 9 18 chrX 62280600 62280817 -104369479 - Lx3_Mus LINE L1 -1 7008 6794 3 1060 181 366 61 61 chrX 62280981 62281112 -104369184 - MER5B DNA MER1_type -24 154 24 3 1060 884 320 109 9 chrX 62281381 62281703 -104368593 - ORR1E LTR MaLR 0 359 6 3 1060 520 257 36 22 chrX 62282016 62282155 -104368141 + ORR1D1 LTR MaLR 1 141 -233 3 1060 6320 119 37 28 chrX 62282171 62283392 -104366904 - L1_Mus4 LINE L1 -2 6634 5398 3 1060 716 276 50 21 chrX 62283451 62283791 -104366505 + L1_Rod LINE L1 4519 4868 -979 3 1060 1416 290 65 8 chrX 62283809 62284438 -104365858 + Lx5 LINE L1 5862 6742 -718 3 1060 216 0 0 0 chrX 62284438 62284462 -104365834 + (CAAAA)n Simple_repeat Simple_repeat 5 28 0 3 1060 503 303 57 28 chrX 62284462 62284493 -104365803 + Lx5 LINE L1 6743 6772 -688 3 1060 865 130 51 6 chrX 62284523 62284701 -104365595 - Lx2 LINE L1 0 6997 6812 3 1060 1543 305 12 18 chrX 62284709 62285313 -104364983 + Lx6 LINE L1 6454 7434 -26 3 1060 877 270 71 48 chrX 62285334 62285813 -104364483 + L1_Rod LINE L1 4905 5394 -453 3 1060 8259 129 26 14 chrX 62285926 62287502 -104362794 + Lx2 LINE L1 5389 6995 -2 3 1060 495 48 0 0 chrX 62287621 62287683 -104362613 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 3 1060 278 278 31 0 chrX 62287683 62287780 -104362516 - Lx7 LINE L1 -30 7666 7567 3 1060 12709 108 14 8 chrX 62287779 62291350 -104358946 + L1Md_F LINE L1 358 5754 -129 3 1060 566 82 12 0 chrX 62291405 62291490 -104358806 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 3 1060 394 354 27 14 chrX 62292940 62293086 -104357210 + RSINE1 SINE B4 3 150 -15 3 1060 230 180 20 0 chrX 62293161 62293211 -104357085 + A-rich Low_complexity Low_complexity 5 55 0 3 1060 346 346 6 145 chrX 62293246 62293425 -104356871 + RSINE1 SINE B4 12 165 0 3 1060 1211 299 65 7 chrX 62293482 62293764 -104356532 + Lx6 LINE L1 6818 7117 -343 3 1060 348 24 0 0 chrX 62293764 62293805 -104356491 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1060 1211 299 65 7 chrX 62293805 62293970 -104356326 + Lx6 LINE L1 7118 7291 -169 3 1060 230 315 54 0 chrX 62294069 62294161 -104356135 + Lx7 LINE L1 7207 7303 -393 3 1060 414 0 0 0 chrX 62294221 62294267 -104356029 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1060 302 183 18 46 chrX 62294275 62294384 -104355912 + T-rich Low_complexity Low_complexity 2 107 0 3 1060 9683 82 3 1 chrX 62294394 62296478 -104353818 - L1Md_F2 LINE L1 0 6582 4495 3 1060 5464 65 0 9 chrX 62296471 62297220 -104353076 - L1_Mm LINE L1 -87 5796 5055 3 1060 33 43 0 0 chrX 62297294 62297341 -104352955 + AT_rich Low_complexity Low_complexity 1 47 0 3 1060 702 268 35 9 chrX 62297569 62297795 -104352501 + L1_Mur2 LINE L1 816 1047 -6039 3 1060 1072 308 170 72 chrX 62297807 62298590 -104351706 + RMER13A LTR ERVK 1 860 0 3 1060 2355 172 4 4 chrX 62298651 62299356 -104350940 + L1_Mur2 LINE L1 1026 1732 -4145 3 1060 3360 231 50 0 chrX 62299407 62300190 -104350106 + Lx5 LINE L1 6229 7050 0 3 1060 24 0 0 0 chrX 62300202 62300226 -104350070 + AT_rich Low_complexity Low_complexity 1 24 0 3 1060 477 0 0 0 chrX 62302393 62302446 -104347850 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 1060 330 262 75 0 chrX 62302466 62302546 -104347750 - RSINE1 SINE B4 -38 127 42 3 1060 620 87 0 0 chrX 62302660 62302752 -104347544 - L1_Mus1 LINE L1 -3 6564 6473 3 1060 330 26 0 0 chrX 62302897 62302936 -104347360 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1060 232 252 39 139 chrX 62303589 62303718 -104346578 - MIRm SINE MIR -1 275 160 3 1060 11394 101 16 2 chrX 62303761 62306163 -104344133 - L1_Mus1 LINE L1 -104 6463 4031 3 1060 501 17 0 0 chrX 62306257 62306315 -104343981 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 3 1060 22 56 0 0 chrX 62307441 62307477 -104342819 + AT_rich Low_complexity Low_complexity 1 36 0 3 1060 314 23 23 0 chrX 62307588 62307631 -104342665 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 3 1060 1007 124 7 0 chrX 62307631 62307776 -104342520 - B1_Mus1 SINE Alu -2 146 1 3 1060 7272 72 6 1 chrX 62308298 62309336 -104340960 - L1Md_F2 LINE L1 0 6582 5587 3 1060 4169 33 0 0 chrX 62309347 62309829 -104340467 - LTRIS_Mm LTR ERV1 0 482 1 3 1060 10305 74 4 13 chrX 62309829 62311260 -104339036 - MuRRS-int LTR ERV1 0 4690 3273 3 1060 19702 68 2 14 chrX 62311296 62314290 -104336006 - MuRRS-int LTR ERV1 -1417 3273 1 3 1060 3968 54 0 0 chrX 62314290 62314772 -104335524 - LTRIS_Mm LTR ERV1 0 482 1 3 1060 29785 80 5 2 chrX 62314772 62318368 -104331928 - L1Md_F2 LINE L1 -304 5579 1978 3 1060 197 33 0 32 chrX 62318368 62318399 -104331897 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1060 29785 128 9 15 chrX 62318399 62319951 -104330345 - L1Md_F2 LINE L1 -3906 1977 446 3 1060 446 61 15 0 chrX 62321702 62321768 -104328528 + (CAAAA)n Simple_repeat Simple_repeat 2 68 0 3 1060 210 71 0 0 chrX 62321944 62321972 -104328324 + (CAGT)n Simple_repeat Simple_repeat 4 31 0 3 1060 22 56 0 0 chrX 62322479 62322515 -104327781 + AT_rich Low_complexity Low_complexity 1 36 0 3 1060 6195 235 61 21 chrX 62323991 62326713 -104323583 - Lx7 LINE L1 0 7696 4796 3 1060 2424 211 40 26 chrX 62326703 62327422 -104322874 - Lx7 LINE L1 -2974 2906 2178 3 1060 5095 95 19 1 chrX 62327429 62328176 -104322120 - L1Md_F2 LINE L1 -23 6559 5800 3 1060 1720 93 4 0 chrX 62328169 62328415 -104321881 + L1Md_F2 LINE L1 5410 5656 -227 3 1060 1440 239 45 13 chrX 62328429 62328896 -104321400 - Lx7 LINE L1 -3697 2183 1702 3 1060 1031 301 8 31 chrX 62328907 62329291 -104321005 - Lx6 LINE L1 -29 7431 7057 3 1060 1535 231 38 20 chrX 62329299 62330063 -104320233 - Lx7 LINE L1 -4190 1690 912 3 1060 362 299 57 6 chrX 62330539 62330714 -104319582 - Lx7 LINE L1 -6891 837 654 3 1060 28 61 0 0 chrX 62330743 62330792 -104319504 + AT_rich Low_complexity Low_complexity 1 49 0 3 1060 189 357 48 65 chrX 62330928 62331096 -104319200 + L2b LINE L2 2811 2975 -444 3 1060 186 324 98 36 chrX 62331146 62331258 -104319038 + L2b LINE L2 3035 3153 -222 3 1060 1197 74 0 0 chrX 62333538 62333686 -104316610 + B1_Mus1 SINE Alu 1 148 0 3 1060 219 181 0 0 chrX 62333686 62333758 -104316538 + A-rich Low_complexity Low_complexity 1 72 0 3 1060 466 247 25 38 chrX 62333918 62334078 -104316218 + L1Md_F LINE L1 668 825 -5791 3 1060 13600 190 11 98 chrX 62334118 62335923 -104314373 + L1Md_F LINE L1 666 2076 -3801 3 1060 1455 58 0 21 chrX 62335923 62336117 -104314179 + L1Md_T LINE L1 6391 6580 -2 3 1060 15662 141 9 18 chrX 62336117 62339050 -104311246 + L1Md_F LINE L1 2082 4987 -896 3 1060 2181 110 3 7 chrX 62339050 62339360 -104310936 - RLTR27 LTR ERVK 0 309 1 3 1060 1248 190 11 23 chrX 62339360 62339624 -104310672 - MMERVK10C-int LTR ERVK 0 7581 7321 3 1060 323 331 13 13 chrX 62339758 62339914 -104310382 - MMERVK10C-int LTR ERVK -512 7069 6914 3 1060 277 111 0 0 chrX 62340507 62340552 -104309744 - MMERVK10C-int LTR ERVK -3756 2786 2742 3 1060 34983 34 11 11 chrX 62340561 62342211 -104308085 - L1Md_T LINE L1 0 6582 4914 3 1060 228 183 46 77 chrX 62342211 62342276 -104308020 + RMER20A LTR ERVK 186 248 -268 3 1060 34983 34 11 11 chrX 62342276 62345941 -104304355 - L1Md_T LINE L1 0 4913 1203 3 1060 8083 8 0 0 chrX 62345907 62346861 -104303435 - L1Md_Gf LINE L1 -5380 1142 189 3 1060 1053 303 34 18 chrX 62346862 62347306 -104302990 - MMERVK10C-int LTR ERVK -4420 3161 2307 3 1060 421 258 24 93 chrX 62347578 62347783 -104302513 - RLTR10-int LTR ERVK -1142 845 655 3 1060 265 185 93 0 chrX 62347814 62347868 -104302428 - RLTR10-int LTR ERVK -7314 267 209 3 1060 2057 140 3 0 chrX 62347892 62348200 -104302096 - RLTR27 LTR ERVK 0 309 1 3 1060 6227 128 3 14 chrX 62348200 62349800 -104300496 + L1_Mus2 LINE L1 4982 6565 -1 3 1060 432 0 0 0 chrX 62350185 62350233 -104300063 + (TATAG)n Simple_repeat Simple_repeat 3 50 0 3 1060 358 294 40 40 chrX 62350611 62350760 -104299536 + ID_B1 SINE B4 76 224 0 3 1060 608 227 23 8 chrX 62350628 62350761 -104299535 + B1_Mur2 SINE Alu 15 149 0 3 1060 396 244 37 0 chrX 62351669 62351751 -104298545 + PB1D7 SINE Alu 5 89 -31 3 1060 396 59 0 0 chrX 62353643 62353694 -104296602 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1060 1642 272 64 36 chrX 62354918 62355493 -104294803 - RLTR1 LTR ERV1 -4 620 30 3 1060 2691 62 96 0 chrX 62355753 62356107 -104294189 + RLTR10 LTR ERVK 1 388 -2 3 1060 1231 48 36 0 chrX 62356119 62356285 -104294011 + RLTR10-int LTR ERVK 41 212 -1775 3 1060 650 161 8 16 chrX 62356363 62356489 -104293807 + RLTR10A LTR ERVK 287 411 0 3 1060 2637 69 20 16 chrX 62356489 62356975 -104293321 + RLTR10-int LTR ERVK 302 867 -1120 3 1060 308 240 62 39 chrX 62357002 62357132 -104293164 + RLTR10-int LTR ERVK 1462 1594 -5987 3 1060 7871 46 0 3 chrX 62357214 62358214 -104292082 + RLTR10-int LTR ERVK 990 1986 -1 3 1060 2784 63 55 0 chrX 62358215 62358582 -104291714 + RLTR10 LTR ERVK 2 388 -2 3 1060 189 0 0 0 chrX 62358775 62358796 -104291500 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1060 2578 106 35 17 chrX 62358847 62359251 -104291045 + RLTR9F LTR ERVK 1 411 -4 3 1060 1563 198 52 13 chrX 62359604 62359911 -104290385 - ORR1A2 LTR MaLR -8 319 1 3 1060 9471 163 66 17 chrX 62359911 62361782 -104288514 - ORR1A2-int LTR MaLR 0 1963 1 3 1060 1881 150 41 0 chrX 62361782 62362096 -104288200 - ORR1A2 LTR MaLR 0 327 1 3 1060 3521 142 45 5 chrX 62362177 62362770 -104287526 + Lx LINE L1 6038 6654 0 3 1060 6437 162 56 19 chrX 62362770 62364229 -104286067 + Lx4A LINE L1 5443 6955 -103 4 1060 1951 139 6 13 chrX 62364233 62364546 -104285750 - RLTR10E LTR ERVK 0 311 1 4 1060 3992 117 8 1 chrX 62364546 62365229 -104285067 - IAPEY3-int LTR ERVK 0 7680 6965 4 1060 1434 102 102 0 chrX 62365229 62365455 -104284841 - IAP-d-int LTR ERVK -1287 5255 5007 4 1060 314 325 31 27 chrX 62365527 62365804 -104284492 - IAPEY3-int LTR ERVK -6017 1564 1316 4 1060 2749 52 106 0 chrX 62365937 62366323 -104283973 - RLTR10-int LTR ERVK -995 992 566 4 1060 369 138 17 60 chrX 62366323 62366439 -104283857 + CT-rich Low_complexity Low_complexity 3 113 0 4 1060 352 47 0 0 chrX 62366527 62366570 -104283726 - RLTR10-int LTR ERVK -7314 267 225 4 1060 275 245 0 0 chrX 62366570 62366623 -104283673 - RLTR27 LTR ERVK -34 275 223 4 1060 1260 75 86 0 chrX 62366623 62366809 -104283487 - RLTR10-int LTR ERVK -1785 202 1 4 1060 2008 136 6 6 chrX 62366809 62367120 -104283176 - RLTR10E LTR ERVK 0 311 1 4 1060 382 228 40 0 chrX 62367120 62367221 -104283075 + Lx4A LINE L1 6953 7057 -1 4 1060 400 349 0 0 chrX 62367245 62367394 -104282902 + GA-rich Low_complexity Low_complexity 2 150 0 4 1060 261 182 0 0 chrX 62367589 62367644 -104282652 + GA-rich Low_complexity Low_complexity 3 57 0 4 1060 189 0 0 0 chrX 62367696 62367717 -104282579 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 4 1060 272 337 28 19 chrX 62369335 62369441 -104280855 - L1_Rod LINE L1 -6968 204 98 4 1060 507 307 136 36 chrX 62369531 62369862 -104280434 - L1M2 LINE L1 -1676 4467 4104 4 1060 960 227 103 13 chrX 62369915 62370227 -104280069 - Lx7 LINE L1 -1688 6008 5669 4 1060 675 349 14 3 chrX 62370222 62370504 -104279792 - RMER1C Other Other -523 819 535 4 1060 1211 209 43 55 chrX 62370505 62370580 -104279716 - Lx7 LINE L1 -528 5352 5276 4 1060 528 16 0 0 chrX 62370580 62370641 -104279655 + (TTCTC)n Simple_repeat Simple_repeat 2 62 0 4 1060 1211 209 43 55 chrX 62370641 62370894 -104279402 - Lx7 LINE L1 -605 5275 5028 4 1060 204 125 0 0 chrX 62370962 62370994 -104279302 + (TC)n Simple_repeat Simple_repeat 1 32 0 4 1060 375 310 108 27 chrX 62371329 62371551 -104278745 - BLACKJACK DNA AcHobo -1969 975 736 4 1060 236 271 23 12 chrX 62371576 62371662 -104278634 + Lx9 LINE L1 6805 6891 -753 4 1060 494 100 0 0 chrX 62371664 62371734 -104278562 - RLTR15 LTR ERVK -289 70 1 4 1060 1843 216 25 5 chrX 62372604 62372999 -104277297 + Lx9 LINE L1 6484 6886 -758 4 1060 1048 218 36 36 chrX 62372994 62373270 -104277026 + L1_Mur3 LINE L1 5567 5842 -38 4 1060 644 316 81 8 chrX 62373262 62373657 -104276639 - L1M3 LINE L1 -491 5809 5386 4 1060 303 274 73 125 chrX 62373677 62373779 -104276517 - L1M3 LINE L1 -847 5293 5215 4 1060 1053 86 0 0 chrX 62373779 62373918 -104276378 - B1_Mm SINE Alu -7 140 2 4 1060 303 274 73 125 chrX 62373918 62374128 -104276168 - L1M3 LINE L1 -926 5214 4997 4 1060 340 282 62 35 chrX 62374220 62374477 -104275819 - Zaphod DNA Tip100 -538 3493 3230 4 1060 1111 66 0 0 chrX 62374479 62374616 -104275680 + B1_Mus2 SINE Alu 1 137 -10 4 1060 217 0 61 0 chrX 62374616 62374649 -104275647 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1060 1946 44 4 4 chrX 62374668 62374918 -104275378 + L1Md_F2 LINE L1 6333 6582 0 4 1060 4361 35 4 0 chrX 62374916 62375432 -104274864 + L1Md_F2 LINE L1 6065 6582 0 4 1060 821 335 10 72 chrX 62375652 62375958 -104274338 + B4 SINE B4 6 292 0 4 1060 25 0 0 0 chrX 62376215 62376240 -104274056 + AT_rich Low_complexity Low_complexity 1 25 0 4 1060 381 301 47 39 chrX 62376247 62376375 -104273921 + RSINE1 SINE B4 2 130 -35 4 1060 27 73 0 0 chrX 62376401 62376456 -104273840 + AT_rich Low_complexity Low_complexity 1 55 0 4 1060 1075 137 40 11 chrX 62377196 62377373 -104272923 - B2_Mm1t SINE B2 -9 184 3 4 1060 26 30 0 0 chrX 62378032 62378065 -104272231 + AT_rich Low_complexity Low_complexity 1 33 0 4 1060 467 281 102 28 chrX 62378521 62378981 -104271315 + L1M2 LINE L1 2246 2743 -3403 4 1060 3670 33 0 0 chrX 62379145 62379639 -104270657 - L1Md_F2 LINE L1 -541 6041 5548 4 1060 3878 60 4 2 chrX 62379639 62380137 -104270159 + L1Md_F2 LINE L1 6084 6582 0 4 1060 602 365 0 0 chrX 62380137 62380351 -104269945 - Lx8 LINE L1 -149 7324 7111 4 1060 633 136 0 0 chrX 62380435 62380538 -104269758 + (TA)n Simple_repeat Simple_repeat 2 104 0 4 1060 543 219 149 42 chrX 62380541 62380797 -104269499 + RLTR26 LTR ERVK 2 326 -316 4 1060 2936 97 2 0 chrX 62380800 62381242 -104269054 - L1_Mm LINE L1 -1263 4620 4178 4 1060 363 80 0 0 chrX 62381244 62381294 -104269002 + L1_Mus1 LINE L1 6180 6229 -337 4 1060 2784 104 19 83 chrX 62381294 62381809 -104268487 - RLTR45 LTR ERVK 0 482 1 4 1060 5158 75 3 3 chrX 62381809 62382504 -104267792 - RLTR45-int LTR ERVK 0 7244 6550 4 1060 1141 45 7 0 chrX 62382511 62382666 -104267630 - RLTR45-int LTR ERVK -2025 5219 5064 4 1060 3002 87 35 22 chrX 62382658 62383151 -104267145 - RLTR45-int LTR ERVK -3258 3986 3488 4 1060 8717 40 10 9 chrX 62383198 62384326 -104265970 - RLTR45-int LTR ERVK -4787 2457 1329 4 1060 1069 24 0 0 chrX 62385135 62385262 -104265034 - RLTR45-int LTR ERVK -6426 818 692 4 1060 5131 60 19 4 chrX 62385566 62386248 -104264048 - RLTR45-int LTR ERVK -6552 692 1 4 1060 2788 108 21 78 chrX 62386248 62386759 -104263537 - RLTR45 LTR ERVK 0 482 1 4 1060 2788 52 0 0 chrX 62386759 62387103 -104263193 + L1_Mus1 LINE L1 6224 6567 0 4 1060 831 295 22 103 chrX 62387120 62387479 -104262817 + RLTR26 LTR ERVK 312 641 -1 4 1060 225 108 0 0 chrX 62387514 62387551 -104262745 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1060 7697 163 38 11 chrX 62387767 62389423 -104260873 + Lx4B LINE L1 5340 7040 -18 4 1060 293 320 0 48 chrX 62389436 62389452 -104260844 - MTE2b LTR MaLR -275 104 5 4 1060 390 230 0 22 chrX 62389452 62389541 -104260755 - MT2A LTR ERVL -442 91 5 4 1060 231 292 0 15 chrX 62389609 62389675 -104260621 - Lx7 LINE L1 -1020 6676 6612 4 1060 1011 117 14 0 chrX 62389698 62389843 -104260453 - B1_Mus1 SINE Alu -1 147 1 4 1060 528 311 74 30 chrX 62390033 62390235 -104260061 - ID_B1 SINE B4 -6 218 8 4 1061 22 0 0 0 chrX 62390538 62390560 -104259736 + AT_rich Low_complexity Low_complexity 1 22 0 4 1061 263 343 127 28 chrX 62390766 62390880 -104259416 + L1MA7 LINE L1 5616 5744 -547 4 1061 495 0 0 0 chrX 62390880 62390935 -104259361 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1061 263 343 127 28 chrX 62390935 62391111 -104259185 + L1MA7 LINE L1 5745 5934 -357 4 1061 799 381 47 23 chrX 62391181 62391798 -104258498 + Lx8 LINE L1 6719 7350 -123 4 1061 583 261 157 42 chrX 62392286 62392451 -104257845 + ORR1D1 LTR MaLR 1 175 -199 4 1061 305 77 0 37 chrX 62392451 62392505 -104257791 + (TCTCTG)n Simple_repeat Simple_repeat 3 54 0 4 1061 583 261 157 42 chrX 62392505 62392671 -104257625 + ORR1D1 LTR MaLR 176 370 -4 4 1061 1366 236 57 6 chrX 62392673 62393117 -104257179 + ORR1D1-int LTR MaLR 1 522 -848 4 1061 314 0 0 0 chrX 62393319 62393354 -104256942 + HAL1-3A_ME LINE L1 1975 2009 -849 4 1061 834 39 0 0 chrX 62393354 62393456 -104256840 + (TA)n Simple_repeat Simple_repeat 2 103 0 4 1061 231 311 50 0 chrX 62393459 62393578 -104256718 + L1MA9 LINE L1 5066 5190 -953 4 1061 23 0 0 0 chrX 62393631 62393654 -104256642 + AT_rich Low_complexity Low_complexity 1 23 0 4 1061 370 276 8 0 chrX 62393656 62393805 -104256491 + L1MA9 LINE L1 5322 5471 -697 4 1061 329 289 44 101 chrX 62393807 62394034 -104256262 + L1MA9 LINE L1 5738 5951 -361 4 1061 201 64 41 41 chrX 62394035 62394084 -104256212 + (TCTCTG)n Simple_repeat Simple_repeat 6 54 0 4 1061 276 77 0 0 chrX 62394100 62394139 -104256157 + (GA)n Simple_repeat Simple_repeat 1 39 0 4 1061 389 199 137 31 chrX 62394353 62394532 -104255764 + L1MA9 LINE L1 5476 5671 -629 4 1061 467 277 92 0 chrX 62394657 62394841 -104255455 + L1MA9 LINE L1 6110 6310 -2 4 1061 24 103 0 0 chrX 62394913 62395000 -104255296 + AT_rich Low_complexity Low_complexity 1 87 0 4 1061 284 174 120 0 chrX 62395036 62395128 -104255168 - Lx9 LINE L1 0 7644 7542 4 1061 261 0 0 0 chrX 62395140 62395169 -104255127 + (TC)n Simple_repeat Simple_repeat 2 30 0 4 1061 2401 80 9 3 chrX 62395500 62395849 -104254447 - BGLII LTR ERVK 0 421 71 4 1061 1954 280 63 14 chrX 62395855 62396313 -104253983 - Lx5 LINE L1 -76 6974 6488 4 1061 4009 44 2 0 chrX 62396313 62396794 -104253502 + LTRIS_Mm LTR ERV1 1 482 0 4 1061 1954 280 63 14 chrX 62396794 62396890 -104253406 - Lx5 LINE L1 -563 6487 6393 4 1061 830 240 53 24 chrX 62396899 62397108 -104253188 + MTD LTR MaLR 172 386 -33 4 1061 220 401 80 0 chrX 62397178 62397340 -104252956 + MIR SINE MIR 53 227 -35 4 1061 365 294 105 60 chrX 62397543 62397876 -104252420 + L1MD LINE L1 4982 5329 -817 4 1061 390 91 0 0 chrX 62398105 62398160 -104252136 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1061 550 369 68 32 chrX 62398206 62398266 -104252030 - B4A SINE B4 -2 290 224 4 1061 2878 116 50 17 chrX 62398266 62398741 -104251555 - L1_Mus3 LINE L1 -7 6631 6141 4 1061 550 369 68 32 chrX 62398741 62398960 -104251336 - B4A SINE B4 -69 223 1 4 1061 225 0 0 0 chrX 62399166 62399191 -104251105 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 4 1061 21 0 0 0 chrX 62400224 62400245 -104250051 + AT_rich Low_complexity Low_complexity 1 21 0 4 1061 24 0 0 0 chrX 62400376 62400400 -104249896 + AT_rich Low_complexity Low_complexity 1 24 0 4 1061 2062 127 32 0 chrX 62401276 62401591 -104248705 - ORR1A2 LTR MaLR -2 325 1 4 1061 1776 245 27 20 chrX 62401737 62402178 -104248118 + Lx6 LINE L1 7009 7452 -8 4 1061 14208 108 8 13 chrX 62403375 62406234 -104244062 + L1Md_A LINE L1 441 3265 -2618 4 1061 31743 52 1 92 chrX 62406236 62409884 -104240412 + L1Md_Gf LINE L1 1 3485 -2401 4 1061 235 218 196 56 chrX 62409884 62409991 -104240305 + RLTR6_Mm LTR ERV1 1 122 -532 4 1061 2169 129 217 26 chrX 62409993 62410453 -104239843 + RLTR6_Mm LTR ERV1 37 584 -70 4 1061 31743 52 1 92 chrX 62410453 62412654 -104237642 + L1Md_Gf LINE L1 3486 5589 -297 4 1061 8220 40 1 0 chrX 62412654 62413649 -104236647 + L1Md_T LINE L1 5587 6582 0 4 1061 16778 77 4 17 chrX 62413651 62415042 -104235254 + L1Md_F2 LINE L1 3251 4627 -1256 4 1061 207 69 0 0 chrX 62415042 62415071 -104235225 + (CAA)n Simple_repeat Simple_repeat 2 30 0 4 1061 16778 77 4 17 chrX 62415071 62416044 -104234252 + L1Md_F2 LINE L1 4628 5585 -298 4 1061 7438 78 3 3 chrX 62416046 62417038 -104233258 + L1Md_F2 LINE L1 5588 6579 -3 4 1061 186 43 0 0 chrX 62417043 62417066 -104233230 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 4 1061 261 329 32 13 chrX 62417172 62417329 -104232967 - L1M5 LINE L1 -597 5527 5368 4 1061 244 311 134 0 chrX 62417671 62417790 -104232506 + L2b LINE L2 3237 3371 -4 4 1061 17799 30 0 0 chrX 62418429 62421229 -104229067 - L1Md_T LINE L1 0 6582 3782 4 1061 189 280 20 0 chrX 62421670 62421720 -104228576 + MIRb SINE MIR 218 268 0 4 1061 1970 244 31 57 chrX 62421723 62422095 -104228201 + Lx7 LINE L1 6899 7270 -426 4 1061 1154 72 6 12 chrX 62422095 62422264 -104228032 + L1_Mus2 LINE L1 6398 6565 -1 4 1061 1970 244 31 57 chrX 62422264 62422472 -104227824 + Lx7 LINE L1 7271 7464 -232 4 1061 26 50 0 0 chrX 62423514 62423554 -104226742 + AT_rich Low_complexity Low_complexity 1 40 0 4 1061 356 211 9 63 chrX 62424668 62424779 -104225517 - Lx8 LINE L1 -10 7463 7359 4 1061 931 276 88 29 chrX 62424776 62425374 -104224922 + Lx8 LINE L1 5288 5954 -1519 4 1061 4441 53 0 2 chrX 62425391 62425942 -104224354 + L1Md_F2 LINE L1 5036 5585 -298 4 1061 8117 45 3 1 chrX 62425943 62426937 -104223359 + L1Md_F2 LINE L1 5587 6582 0 4 1061 1423 235 59 28 chrX 62426976 62427331 -104222965 + ORR1D2 LTR MaLR 5 370 0 4 1061 1940 349 36 9 chrX 62427359 62428307 -104221989 + Lx8 LINE L1 6042 7014 -459 4 1061 537 272 35 66 chrX 62428319 62428516 -104221780 - Lx5 LINE L1 -765 6285 6095 4 1061 232 370 12 12 chrX 62429354 62429436 -104220860 + ID4_ SINE ID 2 83 0 4 1061 474 230 0 0 chrX 62429477 62429564 -104220732 + B4A SINE B4 2 88 -204 4 1061 4162 205 50 35 chrX 62429939 62431026 -104219270 - L1_Mur2 LINE L1 -1776 4101 2999 5 1061 835 47 15 23 chrX 62431026 62431158 -104219138 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 5 1061 575 171 59 96 chrX 62431174 62431310 -104218986 - B1_Mur3 SINE Alu 0 149 19 5 1061 210 150 175 0 chrX 62431388 62431428 -104218868 - B1_Mus2 SINE Alu -83 64 18 5 1061 288 206 47 16 chrX 62431409 62431473 -104218823 + B1_Mus2 SINE Alu 61 126 -21 5 1061 279 79 0 0 chrX 62431478 62431516 -104218780 + (GA)n Simple_repeat Simple_repeat 1 38 0 5 1061 934 122 216 0 chrX 62431518 62431722 -104218574 - L1_Mur2 LINE L1 -2876 3001 2754 5 1061 429 306 81 0 chrX 62431722 62431833 -104218463 + ORR1E LTR MaLR 91 210 -149 5 1061 1568 255 32 17 chrX 62432395 62432806 -104217490 + MTC LTR MaLR 1 417 -4 5 1061 1040 223 13 17 chrX 62432808 62433045 -104217251 + MTC-int LTR MaLR 2 237 -1272 5 1061 2599 211 16 12 chrX 62433036 62433544 -104216752 + MTC-int LTR MaLR 1000 1509 0 5 1061 438 268 306 22 chrX 62433544 62433727 -104216569 + MTC LTR MaLR 1 235 -132 5 1061 2902 224 60 22 chrX 62434032 62435198 -104215098 - Lx7 LINE L1 -1293 6403 5198 5 1061 408 270 37 116 chrX 62435372 62435675 -104214621 + Lx8 LINE L1 5624 5909 -1564 5 1061 186 43 0 0 chrX 62435906 62435929 -104214367 + (TAA)n Simple_repeat Simple_repeat 3 25 0 5 1061 25 31 0 0 chrX 62436182 62436214 -104214082 + AT_rich Low_complexity Low_complexity 1 32 0 5 1061 6501 98 2 3 chrX 62436722 62437635 -104212661 - L1_Mus2 LINE L1 -1 6565 5654 5 1061 5686 124 5 13 chrX 62437634 62438527 -104211769 + L1_Mus2 LINE L1 4762 5646 -237 5 1061 250 348 138 10 chrX 62438909 62439112 -104211184 - L2a LINE L2 0 3426 3198 5 1061 8435 50 0 1 chrX 62439400 62441168 -104209128 - L1Md_F3 LINE L1 -12 6572 4808 5 1061 519 170 0 0 chrX 62441648 62441748 -104208548 + (TG)n Simple_repeat Simple_repeat 1 100 0 5 1061 266 107 70 18 chrX 62442063 62442120 -104208176 + Lx9 LINE L1 7396 7455 -189 5 1061 23 33 0 0 chrX 62442231 62442261 -104208035 + AT_rich Low_complexity Low_complexity 1 30 0 5 1061 3900 39 0 0 chrX 62442322 62442820 -104207476 + L1Md_T LINE L1 6115 6582 0 5 1061 231 114 0 0 chrX 62442835 62442870 -104207426 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1061 42 0 0 0 chrX 62443014 62443056 -104207240 + AT_rich Low_complexity Low_complexity 1 42 0 5 1061 228 259 44 44 chrX 62443059 62443099 -104207197 - RMER12 LTR ERVK -151 1171 1130 5 1061 180 0 0 0 chrX 62443099 62443119 -104207177 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 5 1061 228 259 44 44 chrX 62443119 62443191 -104207105 - RMER12 LTR ERVK -193 1129 1060 5 1061 324 48 0 0 chrX 62443227 62443269 -104207027 + (GAAAA)n Simple_repeat Simple_repeat 2 43 0 5 1061 1441 267 36 99 chrX 62443323 62444193 -104206103 - RMER12 LTR ERVK -1031 817 1 5 1061 3845 102 4 5 chrX 62444228 62444782 -104205514 + L1_Mus2 LINE L1 6012 6564 -2 5 1061 2524 164 19 48 chrX 62444842 62445321 -104204975 + L1VL1 LINE L1 195 659 -5763 5 1061 1756 77 0 4 chrX 62445319 62445566 -104204730 + L1_Mm LINE L1 2892 3137 -2746 5 1061 5576 63 21 0 chrX 62445567 62446286 -104204010 + L1Md_F2 LINE L1 5835 6568 -14 5 1061 2127 108 35 0 chrX 62446290 62446507 -104203789 + MusHAL1 LINE L1 1711 1927 -785 5 1061 207 0 0 0 chrX 62446507 62446530 -104203766 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1061 2127 108 35 0 chrX 62446530 62446655 -104203641 + MusHAL1 LINE L1 1928 2063 -649 5 1061 2771 78 2 72 chrX 62446659 62447076 -104203220 - RLTR10 LTR ERVK -2 388 1 5 1061 8405 40 0 2 chrX 62447079 62448074 -104202222 - RLTR10-int LTR ERVK -5 1982 990 5 1061 541 291 36 36 chrX 62448156 62448409 -104201887 - RLTR10-int LTR ERVK -5987 1594 1342 5 1061 3924 71 10 2 chrX 62448605 62449218 -104201078 - RLTR10-int LTR ERVK -995 992 302 5 1061 467 207 78 0 chrX 62449218 62449334 -104200962 - RLTR10A LTR ERVK 0 411 287 5 1061 1420 35 6 0 chrX 62449412 62449583 -104200713 - RLTR10-int LTR ERVK -1775 212 41 5 1061 3023 60 8 5 chrX 62449595 62449982 -104200314 - RLTR10 LTR ERVK -2 388 1 5 1061 15118 145 28 13 chrX 62449982 62453140 -104197156 + L1_Mus3 LINE L1 3266 6467 -171 5 1061 2545 93 3 3 chrX 62453142 62453508 -104196788 - L1_Mus2 LINE L1 0 6566 6201 5 1061 3216 108 0 12 chrX 62453508 62453987 -104196309 + L1_Mus2 LINE L1 5661 6133 -433 5 1061 852 161 16 53 chrX 62453987 62454177 -104196119 + L1_Mus3 LINE L1 6452 6634 -4 5 1061 8291 47 0 0 chrX 62454231 62455884 -104194412 - L1Md_F2 LINE L1 -12 6570 4918 5 1061 6092 220 47 22 chrX 62455941 62456753 -104193543 - Lx5 LINE L1 -3 7047 6185 5 1061 3015 16 79 0 chrX 62456753 62457120 -104193176 + MTA_Mm LTR MaLR 1 396 0 5 1061 7227 74 80 2 chrX 62457122 62458141 -104192155 + MTA_Mm-int LTR MaLR 1 1098 0 5 1061 3299 46 5 0 chrX 62458141 62458535 -104191761 + MTA_Mm LTR MaLR 1 396 0 5 1061 6092 222 44 21 chrX 62458535 62459191 -104191105 - Lx5 LINE L1 -866 6184 5534 5 1061 625 126 0 18 chrX 62459219 62459332 -104190964 + (TTTTC)n Simple_repeat Simple_repeat 3 113 0 5 1061 934 296 67 32 chrX 62459372 62459715 -104190581 + MTC LTR MaLR 1 362 -57 5 1061 5948 149 23 6 chrX 62459715 62460105 -104190191 + Lx3B LINE L1 5938 6341 -632 5 1061 189 0 0 0 chrX 62460105 62460126 -104190170 + (TAAAA)n Simple_repeat Simple_repeat 4 24 0 5 1061 5948 149 23 6 chrX 62460126 62460754 -104189542 + Lx3B LINE L1 6342 6971 -2 5 1061 844 301 100 103 chrX 62460754 62460829 -104189467 + MTC LTR MaLR 363 418 -1 5 1061 255 140 0 0 chrX 62462048 62462098 -104188198 + (CAAAA)n Simple_repeat Simple_repeat 5 54 0 5 1061 499 306 43 81 chrX 62462122 62462445 -104187851 - Lx7 LINE L1 -425 7271 6961 5 1061 835 147 0 22 chrX 62462459 62462598 -104187698 - Lx9 LINE L1 -799 6845 6710 5 1061 1396 257 52 21 chrX 62462646 62463130 -104187166 - Lx5 LINE L1 -535 5345 4847 5 1061 4723 153 37 38 chrX 62464396 62465339 -104184957 + Lx3B LINE L1 6015 6956 -17 5 1061 180 152 0 0 chrX 62465367 62465400 -104184896 + A-rich Low_complexity Low_complexity 1 33 0 5 1061 585 115 0 0 chrX 62466325 62466412 -104183884 + B1_Mus1 SINE Alu 2 88 -60 5 1061 273 346 86 27 chrX 62466768 62466955 -104183341 - MER20 DNA MER1_type -19 200 3 5 1061 4511 145 4 11 chrX 62468471 62469223 -104181073 + L1_Mm LINE L1 5077 5823 -60 5 1061 5698 88 9 11 chrX 62469233 62469883 -104180413 + L1_Mus2 LINE L1 5765 6419 -147 5 1061 2747 51 0 15 chrX 62469883 62470220 -104180076 - IAPEY3_LTR LTR ERVK 0 332 1 5 1061 5698 88 9 11 chrX 62470220 62470366 -104179930 + L1_Mus2 LINE L1 6420 6559 -7 5 1061 5416 109 14 5 chrX 62470366 62471170 -104179126 + L1_Mus4 LINE L1 5826 6636 0 5 1061 262 318 38 94 chrX 62471535 62471662 -104178634 - L1MB8 LINE L1 -53 6125 6003 5 1061 429 20 0 0 chrX 62471662 62471712 -104178584 + (TC)n Simple_repeat Simple_repeat 2 51 0 5 1061 180 0 0 0 chrX 62471713 62471733 -104178563 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 1061 262 318 38 94 chrX 62471733 62471815 -104178481 - L1MB8 LINE L1 -176 6002 5926 5 1061 23 33 0 0 chrX 62471895 62471925 -104178371 + AT_rich Low_complexity Low_complexity 1 30 0 5 1061 3019 97 5 5 chrX 62471987 62472413 -104177883 - L1_Mus3 LINE L1 -15 6623 6198 5 1061 744 359 85 32 chrX 62473407 62474216 -104176080 + L2 LINE L2 1604 2455 -964 5 1061 183 380 19 29 chrX 62474479 62474582 -104175714 + L2 LINE L2 2481 2582 -837 5 1061 3445 69 19 39 chrX 62475050 62475533 -104174763 - MT2C_Mm LTR ERVL 0 475 3 5 1061 369 43 0 0 chrX 62475535 62475582 -104174714 - MERVL-int LTR ERVL 0 5485 5439 5 1061 300 156 0 45 chrX 62475582 62475649 -104174647 - ORR1A3-int LTR MaLR -1333 630 567 5 1061 23231 81 8 3 chrX 62475770 62478821 -104171475 - MERVL-int LTR ERVL -129 5356 2290 5 1061 2926 124 5 9 chrX 62478809 62479249 -104171047 - MERVL-int LTR ERVL -5047 438 1 5 1061 3470 67 33 0 chrX 62479249 62479709 -104170587 - MT2C_Mm LTR ERVL 0 475 1 5 1061 2045 122 97 0 chrX 62479709 62480071 -104170225 - RLTR47_MM LTR ERV1 -135 397 1 5 1061 410 354 16 12 chrX 62480168 62480414 -104169882 - RLTR6-int LTR ERV1 -65 7713 7467 5 1061 457 356 10 5 chrX 62480397 62480606 -104169690 - RLTR6-int LTR ERV1 -3236 4542 4333 5 1061 596 299 36 40 chrX 62480722 62480969 -104169327 - RLTR6-int LTR ERV1 -4675 3103 2858 5 1061 1216 364 24 24 chrX 62481054 62481792 -104168504 - Lx8 LINE L1 -145 7328 6591 5 1061 960 184 31 21 chrX 62481812 62482032 -104168264 + MERVL_2A-int LTR ERVL 5243 5492 -269 5 1061 834 217 29 0 chrX 62482809 62482984 -104167312 + URR1B DNA MER1_type 3 182 -43 5 1061 900 250 109 30 chrX 62483947 62484285 -104166011 - Lx6 LINE L1 -1395 6065 5701 5 1061 202 150 0 24 chrX 62484337 62484378 -104165918 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 5 1061 23 54 0 0 chrX 62484658 62484695 -104165601 + AT_rich Low_complexity Low_complexity 1 37 0 5 1061 1046 95 0 0 chrX 62485115 62485252 -104165044 - B1_Mus2 SINE Alu -8 139 3 5 1061 660 48 0 0 chrX 62485253 62485337 -104164959 + (TTTC)n Simple_repeat Simple_repeat 2 85 0 5 1061 345 47 0 0 chrX 62485570 62485613 -104164683 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 1061 28 29 0 0 chrX 62485683 62485718 -104164578 + AT_rich Low_complexity Low_complexity 1 35 0 5 1061 1570 271 17 30 chrX 62486897 62487304 -104162992 + MTD LTR MaLR 18 419 0 5 1061 1007 313 53 18 chrX 62487403 62487686 -104162610 - MTE2a LTR MaLR -85 294 2 5 1061 417 306 65 0 chrX 62487708 62487832 -104162464 + B4 SINE B4 88 219 -73 5 1061 836 272 56 0 chrX 62488075 62488288 -104162008 + Lx8 LINE L1 6883 7107 -366 5 1061 2702 224 144 11 chrX 62488573 62489233 -104161063 + MTC-int LTR MaLR 237 984 -274 5 1061 1523 215 52 106 chrX 62489254 62489697 -104160599 + MTC LTR MaLR 1 419 -2 5 1061 186 43 0 0 chrX 62489706 62489729 -104160567 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1061 1049 71 42 14 chrX 62489739 62489882 -104160414 - B1_Mus2 SINE Alu 0 147 1 5 1061 483 194 0 0 chrX 62489922 62490020 -104160276 + (TATG)n Simple_repeat Simple_repeat 2 99 0 5 1061 833 177 91 25 chrX 62490032 62490229 -104160067 - ORR1C2 LTR MaLR 0 384 175 5 1061 205 214 18 18 chrX 62490231 62490288 -104160008 + GA-rich Low_complexity Low_complexity 2 58 0 5 1061 626 229 64 29 chrX 62490290 62490461 -104159835 - ORR1C2 LTR MaLR -195 179 3 5 1061 1394 235 71 38 chrX 62490478 62490872 -104159424 - MTD LTR MaLR 0 419 13 5 1061 304 371 6 70 chrX 62491337 62491473 -104158823 + B4A SINE B4 133 265 -27 5 1061 222 118 0 0 chrX 62491473 62491507 -104158789 + (CG)n Simple_repeat Simple_repeat 2 35 0 5 1061 309 51 0 0 chrX 62491507 62491545 -104158751 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1061 304 371 6 70 chrX 62491545 62491578 -104158718 + B4A SINE B4 266 291 -1 5 1061 8522 133 47 28 chrX 62491613 62493224 -104157072 + MusHAL1 LINE L1 703 2343 -369 5 1061 6202 143 6 23 chrX 62493215 62493866 -104156430 + L1_Mm LINE L1 4153 4805 -1078 5 1061 1060 102 0 7 chrX 62493866 62494014 -104156282 + B1_Mm SINE Alu 1 147 0 5 1061 495 0 0 0 chrX 62494020 62494075 -104156221 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 5 1061 6202 143 6 23 chrX 62494075 62494463 -104155833 + L1_Mm LINE L1 4806 5181 -702 5 1061 1205 172 9 28 chrX 62495824 62496039 -104154257 + MTC LTR MaLR 175 385 -36 5 1061 3304 75 0 11 chrX 62496792 62497248 -104153048 - L1Md_F2 LINE L1 0 6582 6132 5 1061 21 0 0 0 chrX 62497265 62497286 -104153010 + AT_rich Low_complexity Low_complexity 1 21 0 5 1061 21 0 0 0 chrX 62497627 62497648 -104152648 + AT_rich Low_complexity Low_complexity 1 21 0 5 1061 4887 108 4 54 chrX 62497747 62498527 -104151769 - L1_Mus2 LINE L1 0 6566 5826 5 1061 8843 140 16 1 chrX 62498527 62500000 -104150296 - L1_Mm LINE L1 -773 5110 3615 5 1061 14719 125 16 0 chrX 62500002 62500129 -104150167 - L1Md_F LINE L1 -2271 3612 3486 1 1061 288 0 0 0 chrX 62500129 62500161 -104150135 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 1061 14719 141 34 28 chrX 62500161 62503182 -104147114 - L1Md_F LINE L1 -2398 3485 446 1 1061 226 322 85 61 chrX 62503198 62503360 -104146936 - L1MD1 LINE L1 -199 6043 5865 3 1061 441 0 0 0 chrX 62503360 62503409 -104146887 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1061 262 303 295 41 chrX 62503409 62503615 -104146681 - L1MD1 LINE L1 -378 5864 5621 3 1061 752 232 91 20 chrX 62503624 62503671 -104146625 - B3 SINE B2 -3 213 166 5 1061 339 85 0 0 chrX 62503671 62503718 -104146578 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1061 752 232 91 20 chrX 62503718 62503868 -104146428 - B3 SINE B2 -51 165 2 5 1061 3714 107 8 0 chrX 62503898 62504483 -104145813 - L1_Mus3 LINE L1 0 6638 6085 7 1061 227 250 97 32 chrX 62504521 62504645 -104145651 - L1MC LINE L1 -478 5855 5724 8 1061 469 274 0 0 chrX 62504696 62504802 -104145494 + PB1D10 SINE Alu 7 112 -5 9 1061 399 315 78 69 chrX 62504873 62504960 -104145336 - LTR41 LTR ERVL -516 252 162 1 1061 391 248 0 96 chrX 62504960 62505085 -104145211 + PB1D10 SINE Alu 1 113 -4 1 1061 399 315 78 69 chrX 62505085 62505229 -104145067 - LTR41 LTR ERVL -607 161 19 1 1061 1424 255 94 59 chrX 62505357 62505470 -104144826 + MTD LTR MaLR 1 112 -307 1 1061 414 0 0 0 chrX 62505470 62505516 -104144780 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1061 1424 255 94 59 chrX 62505516 62505807 -104144489 + MTD LTR MaLR 113 419 0 1 1061 771 179 14 28 chrX 62506009 62506153 -104144143 + Lx8 LINE L1 7094 7235 -238 1 1061 407 250 40 204 chrX 62506133 62506334 -104143962 + Lx8 LINE L1 7153 7320 -153 1 1061 1042 259 95 38 chrX 62506345 62506767 -104143529 - L1MC1 LINE L1 -494 5839 5394 1 1061 360 0 0 0 chrX 62506850 62506890 -104143406 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1061 4713 193 65 96 chrX 62506958 62507190 -104143106 + Lx5 LINE L1 5916 6162 -888 1 1061 544 213 18 18 chrX 62507190 62507300 -104142996 + RLTR22_Mur LTR ERVK 1 110 -1738 1 1061 4713 193 65 96 chrX 62507300 62508130 -104142166 + Lx5 LINE L1 6163 7050 0 1 1061 426 328 0 30 chrX 62508173 62508308 -104141988 + B1F2 SINE Alu 1 131 -18 1 1061 315 0 0 0 chrX 62508367 62508402 -104141894 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1061 510 303 129 31 chrX 62508702 62508988 -104141308 - MLT1D LTR MaLR -79 426 113 2 1061 248 333 11 22 chrX 62509304 62509396 -104140900 - MLT1D LTR MaLR -232 133 43 2 1061 275 119 0 0 chrX 62509513 62509555 -104140741 + ORR1B1 LTR MaLR 1 42 -352 2 1061 1211 153 34 11 chrX 62509535 62509764 -104140532 + ORR1B1 LTR MaLR 147 393 -1 2 1061 7679 89 0 17 chrX 62510109 62511229 -104139067 + L1_Mus4 LINE L1 5535 6636 0 2 1061 5077 183 44 40 chrX 62511419 62511795 -104138501 + Lx7 LINE L1 5962 6359 -1337 2 1061 4001 141 83 30 chrX 62511795 62512495 -104137801 + RMER19A LTR ERVK 1 737 0 2 1061 5077 183 44 40 chrX 62512495 62513164 -104137132 + Lx7 LINE L1 6360 7011 -685 2 1061 3691 147 71 26 chrX 62513167 62513903 -104136393 - Lx5 LINE L1 -516 5361 4593 2 1061 3096 215 198 36 chrX 62513898 62515290 -104135006 + Lx5 LINE L1 5359 7028 -22 2 1061 2417 214 51 110 chrX 62515304 62516069 -104134227 + Lx7 LINE L1 6977 7696 0 2 1061 522 223 446 28 chrX 62516325 62516722 -104133574 - RMER21B LTR ERV1 -279 563 1 2 1061 356 395 0 13 chrX 62516722 62516881 -104133415 - RMER15-int LTR ERVL -4690 309 153 2 1061 234 62 0 0 chrX 62516910 62516942 -104133354 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2 1061 15434 65 9 1 chrX 62516988 62520183 -104130113 - L1Md_F2 LINE L1 -14 6568 1356 3 1061 284 258 30 0 chrX 62520190 62520256 -104130040 - B3 SINE B2 -80 136 69 3 1061 323 270 73 114 chrX 62520337 62520609 -104129687 - L1MC LINE L1 -1202 4944 4684 3 1061 228 311 125 5 chrX 62520642 62520826 -104129470 - L1M4 LINE L1 -1534 4612 4407 3 1061 1279 233 26 52 chrX 62520914 62521222 -104129074 + MTE2a LTR MaLR 80 379 0 3 132 332 312 60 36 chrX 62521222 62521388 -104128908 - L1M4 LINE L1 -1725 4421 4252 3 1062 459 0 0 0 chrX 62522443 62522494 -104127802 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 1062 5083 178 19 15 chrX 62523106 62524035 -104126261 + Lx4A LINE L1 6114 7046 -12 3 1062 291 136 0 0 chrX 62524036 62524095 -104126201 + (ATG)n Simple_repeat Simple_repeat 3 61 0 3 1062 8733 104 32 6 chrX 62524519 62525901 -104124395 + MusHAL1 LINE L1 669 2086 -626 3 1062 257 200 108 0 chrX 62526073 62526138 -104124158 - L1MD1 LINE L1 -141 6101 6030 3 1062 27062 132 23 11 chrX 62526150 62532000 -104118296 - L1_Mus1 LINE L1 -3 6651 675 4 1062 5404 78 0 0 chrX 62533179 62533884 -104116412 + L1_Mus1 LINE L1 5863 6567 0 4 1062 21 0 0 0 chrX 62534989 62535010 -104115286 + AT_rich Low_complexity Low_complexity 1 21 0 4 1062 213 121 0 0 chrX 62535168 62535201 -104115095 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 1062 856 175 25 0 chrX 62535522 62535682 -104114614 - URR1A DNA MER1_type -4 222 59 4 1062 187 152 21 21 chrX 62536085 62536132 -104114164 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 1062 204 313 181 15 chrX 62537809 62537942 -104112354 + L2a LINE L2 2973 3127 -299 4 1062 1858 247 46 7 chrX 62538079 62538511 -104111785 - Lx6 LINE L1 -9 7451 7003 4 1062 1404 239 27 14 chrX 62538624 62538993 -104111303 - ORR1D1 LTR MaLR 0 374 1 4 1062 221 251 6 44 chrX 62539068 62539166 -104111130 + A-rich Low_complexity Low_complexity 1 94 0 4 1062 233 282 32 16 chrX 62539167 62539293 -104111003 + L1M3 LINE L1 4893 5020 -1120 5 1062 978 89 0 46 chrX 62539774 62540112 -104110184 + L1_Mus2 LINE L1 6416 6566 0 5 1062 1208 74 0 18 chrX 62540112 62540278 -104110018 + MTB LTR MaLR 184 346 -54 5 1062 2805 92 39 0 chrX 62540283 62540695 -104109601 + L1_Mus3 LINE L1 5853 6280 -358 5 1062 205 191 0 0 chrX 62540704 62540746 -104109550 + A-rich Low_complexity Low_complexity 1 42 0 5 1062 1357 191 64 32 chrX 62541157 62541170 -104109126 + RMER6C LTR ERVK 368 377 -313 5 1062 828 20 0 0 chrX 62541170 62541268 -104109028 + (GGGAGA)n Simple_repeat Simple_repeat 4 101 0 5 1062 1357 191 64 32 chrX 62541268 62541567 -104108729 + RMER6C LTR ERVK 378 690 0 5 1062 23 33 0 0 chrX 62542893 62542923 -104107373 + AT_rich Low_complexity Low_complexity 1 30 0 5 1062 4454 157 50 21 chrX 62543081 62544254 -104106042 + Lx2B LINE L1 5036 6255 -745 5 1062 354 297 60 16 chrX 62544466 62544716 -104105580 - Lx9 LINE L1 -18 7626 7366 5 1062 285 151 0 0 chrX 62544716 62544769 -104105527 + T-rich Low_complexity Low_complexity 1 53 0 6 1062 23 33 0 0 chrX 62545345 62545375 -104104921 + AT_rich Low_complexity Low_complexity 1 30 0 6 1062 231 255 93 33 chrX 62545381 62545531 -104104765 - L1MA9 LINE L1 -59 6253 6095 6 1062 253 310 106 12 chrX 62546233 62546403 -104103893 - L1M4 LINE L1 -667 5457 5272 6 1062 404 355 46 24 chrX 62546435 62546779 -104103517 - L1M4 LINE L1 -919 5227 4875 6 1062 28 0 0 0 chrX 62546794 62546822 -104103474 + AT_rich Low_complexity Low_complexity 1 28 0 6 1062 622 322 46 21 chrX 62546822 62546975 -104103321 - Lx6 LINE L1 -177 7283 7124 6 1062 243 0 0 0 chrX 62546975 62547002 -104103294 + (TA)n Simple_repeat Simple_repeat 1 27 0 6 1062 622 322 46 21 chrX 62547002 62547089 -104103207 - Lx6 LINE L1 -337 7123 7038 6 1062 29 28 0 0 chrX 62547229 62547265 -104103031 + AT_rich Low_complexity Low_complexity 1 36 0 6 1062 293 385 0 0 chrX 62547279 62547383 -104102913 + B1F1 SINE Alu 3 106 -43 6 1062 479 158 81 61 chrX 62547499 62547647 -104102649 - Lx2A1 LINE L1 -1 7007 6857 6 1062 3715 230 22 39 chrX 62548031 62549047 -104101249 - Lx4B LINE L1 0 7000 5998 7 1062 1758 90 0 27 chrX 62549102 62549364 -104100932 - L1Md_F2 LINE L1 0 6582 6328 7 1062 6068 168 6 9 chrX 62549364 62550590 -104099706 - Lx4B LINE L1 -1061 5997 4769 7 1062 713 288 71 111 chrX 62550590 62550914 -104099382 - MTE2b LTR MaLR -11 368 58 7 1062 7406 36 0 0 chrX 62551265 62552143 -104098153 - L1Md_A LINE L1 -2 6580 5703 7 1062 21 36 0 0 chrX 62552678 62552706 -104097590 + AT_rich Low_complexity Low_complexity 1 28 0 7 1062 250 275 11 11 chrX 62552902 62552994 -104097302 + A-rich Low_complexity Low_complexity 1 92 0 7 1062 281 24 0 47 chrX 62553810 62553853 -104096443 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 7 1062 447 68 0 0 chrX 62554349 62554408 -104095888 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1062 453 66 0 0 chrX 62554408 62554469 -104095827 + (GA)n Simple_repeat Simple_repeat 1 61 0 7 1062 1545 193 63 3 chrX 62554596 62554898 -104095398 + Lx4A LINE L1 6737 7056 -2 7 1062 1022 308 66 41 chrX 62554978 62555371 -104094925 + Lx6 LINE L1 7030 7432 -28 8 1062 366 345 37 54 chrX 62556621 62556918 -104093378 - L1ME4a LINE L1 -58 6066 5775 8 1062 960 257 80 11 chrX 62557977 62558327 -104091969 + ORR1D1 LTR MaLR 1 374 0 8 1062 234 237 17 0 chrX 62558327 62558386 -104091910 + ORR1D1-int LTR MaLR 1 60 -1310 8 1062 1687 303 57 44 chrX 62558393 62559070 -104091226 + ORR1D1-int LTR MaLR 173 987 -522 8 1062 31 0 0 0 chrX 62559291 62559322 -104090974 + AT_rich Low_complexity Low_complexity 1 31 0 8 1062 1512 76 13 18 chrX 62559365 62559593 -104090703 + L1_Mus3 LINE L1 6411 6637 -1 8 1062 3494 232 89 10 chrX 62559598 62560500 -104089796 - Lx7 LINE L1 -779 6917 5945 8 1062 21 0 0 0 chrX 62560503 62560524 -104089772 + AT_rich Low_complexity Low_complexity 1 21 0 8 1062 7976 50 1 0 chrX 62560528 62561918 -104088378 - L1Md_F2 LINE L1 -13 6569 5199 8 1062 236 296 0 0 chrX 62561898 62561969 -104088327 - Lx7 LINE L1 -1749 5947 5877 8 1062 562 90 0 0 chrX 62561973 62562051 -104088245 - L1_Mus2 LINE L1 -407 6159 6082 8 1062 1395 241 123 3 chrX 62562048 62562431 -104087865 - Lx7 LINE L1 -24 5856 5428 8 1062 5537 197 17 27 chrX 62562672 62562692 -104087604 - Lx2B LINE L1 0 7000 6978 8 1062 3974 79 2 11 chrX 62562692 62563243 -104087053 - L1Md_F2 LINE L1 -3 6579 6034 9 1062 5537 197 17 27 chrX 62563243 62564389 -104085907 - Lx2B LINE L1 -23 6977 5847 8 1062 6283 195 72 27 chrX 62564395 62566017 -104084279 - Lx7 LINE L1 -545 5335 3641 8 1062 1084 161 39 5 chrX 62566013 62566219 -104084077 + Lx7 LINE L1 3428 3640 -2240 8 1062 415 355 77 0 chrX 62566707 62566876 -104083420 - ID_B1 SINE B4 -42 182 1 9 1062 209 260 29 29 chrX 62567283 62567386 -104082910 + (TTTA)n Simple_repeat Simple_repeat 2 104 0 9 1062 295 218 72 193 chrX 62567494 62567784 -104082512 - Charlie2b DNA MER1_type -295 2487 2233 9 1062 3245 46 0 0 chrX 62567799 62568193 -104082103 - L1Md_T LINE L1 -2 6580 6187 9 1062 303 28 0 0 chrX 62569356 62569392 -104080904 + (T)n Simple_repeat Simple_repeat 1 36 0 9 1062 225 132 0 0 chrX 62569472 62569510 -104080786 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 9 1062 345 370 136 29 chrX 62570577 62570850 -104079446 - ORR1E LTR MaLR -6 353 52 9 1062 293 224 39 19 chrX 62571270 62571425 -104078871 + (TA)n Simple_repeat Simple_repeat 1 158 0 9 1062 6434 115 42 3 chrX 62571618 62573157 -104077139 + L1_Mus2 LINE L1 4966 6564 -2 9 1062 222 213 33 0 chrX 62573963 62574024 -104076272 + L2 LINE L2 2816 2878 -541 1 1062 185 312 47 0 chrX 62574078 62574142 -104076154 + MER5B DNA MER1_type 41 107 -71 1 1062 532 309 125 66 chrX 62574163 62574534 -104075762 + MTE2a LTR MaLR 18 372 -7 1 1062 229 353 64 72 chrX 62574637 62574872 -104075424 + L3 LINE CR1 4064 4296 -193 1 1062 7264 79 11 4 chrX 62575319 62576615 -104073681 - L1Md_F2 LINE L1 -11 6571 5267 1 1062 1163 7 0 7 chrX 62577242 62577379 -104072917 + (TCTA)n Simple_repeat Simple_repeat 1 136 0 1 1062 721 306 0 0 chrX 62577380 62577579 -104072717 - B3 SINE B2 -17 199 1 1 1062 833 157 7 0 chrX 62578449 62578602 -104071694 + GA-rich Low_complexity Low_complexity 1 154 0 1 1062 1549 243 44 3 chrX 62578998 62579340 -104070956 + Lx5 LINE L1 6690 7045 -5 1 1062 549 110 0 0 chrX 62579545 62579627 -104070669 + (TG)n Simple_repeat Simple_repeat 1 82 0 1 1062 336 336 45 45 chrX 62579646 62579780 -104070516 - RSINE1 SINE B4 -19 146 13 1 1062 1293 181 55 8 chrX 62580229 62580485 -104069811 - RMER6C LTR ERVK 0 690 423 1 1062 302 75 0 0 chrX 62580485 62580525 -104069771 - L1_Mur2 LINE L1 -1436 4441 4402 1 1062 7211 109 20 1 chrX 62580526 62581658 -104068638 + L1_Mus4 LINE L1 5482 6633 -3 1 1062 389 186 5 213 chrX 62581766 62581950 -104068346 - MT2B2 LTR ERVL -314 287 154 1 1062 530 185 0 0 chrX 62581943 62582035 -104068261 - RMER6C LTR ERVK -595 95 4 1 1062 387 0 0 0 chrX 62582177 62582220 -104068076 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 1 1062 342 0 0 0 chrX 62582221 62582259 -104068037 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1062 394 354 20 20 chrX 62582260 62582407 -104067889 - B3A SINE B2 -46 152 6 1 1062 286 340 7 48 chrX 62582457 62582602 -104067694 + L2 LINE L2 2717 2855 -564 1 1062 846 285 5 5 chrX 62582930 62583152 -104067144 - Lx6 LINE L1 -149 7311 7090 1 1062 250 254 23 136 chrX 62583167 62583299 -104066997 + Lx6 LINE L1 7318 7434 -26 1 1062 25 75 0 0 chrX 62585707 62585760 -104064536 + AT_rich Low_complexity Low_complexity 1 53 0 1 1062 290 323 104 20 chrX 62585843 62586121 -104064175 + ORR1E LTR MaLR 1 301 -58 1 1062 582 249 13 60 chrX 62586427 62586662 -104063634 - Lx7 LINE L1 -20 7676 7453 1 1062 446 0 0 18 chrX 62586664 62586719 -104063577 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 1 1062 939 159 6 29 chrX 62586730 62586905 -104063391 - L1_Mur3 LINE L1 -3591 2289 2119 1 1062 4374 138 75 4 chrX 62586906 62587657 -104062639 - Lx2B LINE L1 -400 6600 5797 1 1062 1230 228 78 12 chrX 62587661 62588087 -104062209 - L1_Mur3 LINE L1 -3766 2114 1661 1 1062 1012 249 100 17 chrX 62588087 62588453 -104061843 + MTC LTR MaLR 1 421 0 1 1062 1317 215 28 22 chrX 62588470 62588832 -104061464 - L1_Mur3 LINE L1 -4231 1649 1286 1 1062 4543 148 38 43 chrX 62588834 62589751 -104060545 + L1_Mur2 LINE L1 2946 3845 -2032 1 1062 363 23 0 0 chrX 62589751 62589795 -104060501 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1062 4543 148 38 43 chrX 62589795 62589826 -104060470 + L1_Mur2 LINE L1 3846 3888 -1989 1 1062 506 285 58 6 chrX 62589873 62590046 -104060250 + MLT2D LTR ERVL 1 182 -232 1 1062 210 333 161 35 chrX 62590064 62590151 -104060145 - PB1D10 SINE Alu -14 103 6 1 1062 242 377 50 33 chrX 62590144 62590325 -104059971 + MLT2D LTR ERVL 164 347 -50 1 1062 183 42 0 0 chrX 62590544 62590568 -104059728 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1062 2124 263 122 6 chrX 62590639 62591317 -104058979 - L1_Mur3 LINE L1 -6469 1259 503 1 1062 187 362 72 24 chrX 62591631 62591798 -104058498 + L2c LINE L2 3205 3379 -8 1 1062 360 0 0 0 chrX 62592839 62592879 -104057417 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1062 495 95 0 0 chrX 62593916 62593990 -104056306 + (GA)n Simple_repeat Simple_repeat 1 74 0 1 1062 380 346 43 50 chrX 62594000 62594161 -104056135 + ID_B1 SINE B4 3 162 -62 1 1062 458 325 25 13 chrX 62594262 62594421 -104055875 + Lx6 LINE L1 7180 7340 -120 1 1062 269 274 38 0 chrX 62595510 62595616 -104054680 + Lx6 LINE L1 7342 7451 -9 1 1062 1905 246 29 65 chrX 62595651 62595762 -104054534 - RMER13B LTR ERVK -9 899 796 1 1062 198 0 0 0 chrX 62595762 62595784 -104054512 + (TGG)n Simple_repeat Simple_repeat 2 23 0 1 1062 1905 246 29 65 chrX 62595784 62596323 -104053973 - RMER13B LTR ERVK -113 795 272 1 1062 1504 231 61 31 chrX 62596343 62596767 -104053529 - RMER17B LTR ERVK -521 437 1 1 1062 1255 245 142 15 chrX 62596946 62597277 -104053019 + MTB_Mm LTR MaLR 3 375 -32 1 1062 186 281 61 30 chrX 62597316 62597382 -104052914 - L2 LINE L2 -1344 2075 2008 1 1062 1254 158 25 16 chrX 62597851 62598095 -104052201 - Lx3B LINE L1 0 6973 6728 1 1062 347 0 23 0 chrX 62598114 62598157 -104052139 + (CAAA)n Simple_repeat Simple_repeat 3 46 0 1 1062 22 56 0 0 chrX 62598667 62598703 -104051593 + AT_rich Low_complexity Low_complexity 1 36 0 1 1062 440 320 79 22 chrX 62598747 62598974 -104051322 - Lx7 LINE L1 -366 7330 7091 1 1062 22229 88 2 10 chrX 62599463 62600132 -104050164 - L1_Mm LINE L1 -5 5878 5210 1 1062 6216 65 30 19 chrX 62600132 62600978 -104049318 - RLTR13A LTR ERVK 0 855 1 1 1062 22229 88 2 10 chrX 62600978 62603471 -104046825 - L1_Mm LINE L1 -674 5209 2743 1 1062 4952 76 21 7 chrX 62603471 62604148 -104046148 + L1Md_F2 LINE L1 5885 6570 -12 1 1062 351 0 0 0 chrX 62604231 62604270 -104046026 + (T)n Simple_repeat Simple_repeat 1 39 0 1 1062 37 23 0 0 chrX 62604701 62604745 -104045551 + AT_rich Low_complexity Low_complexity 1 44 0 1 1062 408 20 0 0 chrX 62604953 62605002 -104045294 + (CAAAA)n Simple_repeat Simple_repeat 3 51 0 1 1062 5997 192 43 52 chrX 62605604 62606641 -104043655 + L1_Mur2 LINE L1 822 1841 -4036 1 1062 2331 44 7 3 chrX 62606641 62606966 -104043330 + L1Md_F3 LINE L1 6280 6584 0 1 1062 5997 189 58 73 chrX 62606966 62607864 -104042432 + L1_Mur2 LINE L1 1842 2744 -3133 1 1062 207 0 0 0 chrX 62607864 62607887 -104042409 + (TC)n Simple_repeat Simple_repeat 1 23 0 1 1062 492 32 0 0 chrX 62607887 62607948 -104042348 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 1062 5997 189 58 73 chrX 62607948 62608108 -104042188 + L1_Mur2 LINE L1 2745 2899 -2978 1 1062 3899 185 58 70 chrX 62608116 62609018 -104041278 - RMER19B LTR ERVK -11 891 1 1 1062 846 213 11 36 chrX 62609018 62609258 -104041038 + L1_Mur2 LINE L1 2894 3129 -2748 1 1062 546 16 0 0 chrX 62609258 62609321 -104040975 + (GGAAA)n Simple_repeat Simple_repeat 3 65 0 1 1062 846 213 11 36 chrX 62609321 62609358 -104040938 + L1_Mur2 LINE L1 3130 3164 -2713 1 1062 814 173 5 18 chrX 62609390 62609819 -104040477 + GA-rich Low_complexity Low_complexity 1 423 0 1 1062 1218 168 8 0 chrX 62609823 62610073 -104040223 + L1_Mur2 LINE L1 3119 3370 -2507 1 1062 1472 45 6 0 chrX 62610090 62610267 -104040029 - B2_Mm1t SINE B2 -14 179 2 1 1062 33063 75 2 1 chrX 62610303 62615406 -104034890 + L1Md_F3 LINE L1 521 5586 -297 1 1062 8042 45 8 3 chrX 62615406 62616399 -104033897 + L1Md_F3 LINE L1 5587 6584 0 1 1062 7372 193 44 20 chrX 62616399 62618089 -104032207 + L1_Mur2 LINE L1 3447 5176 -701 1 1062 4929 222 45 5 chrX 62618097 62619154 -104031142 + Lx5 LINE L1 5948 7047 -3 1 1062 1127 75 7 0 chrX 62619493 62619639 -104030657 + B1_Mus2 SINE Alu 1 147 0 1 1062 210 136 0 0 chrX 62619639 62619683 -104030613 + (A)n Simple_repeat Simple_repeat 1 44 0 1 1062 721 44 0 0 chrX 62620173 62620264 -104030032 - BC1_Mm scRNA scRNA -61 91 1 1 1062 510 368 42 80 chrX 62620942 62621108 -104029188 - MLT1D LTR MaLR -70 435 288 1 1062 5063 92 1 11 chrX 62621108 62621813 -104028483 - L1_Mus1 LINE L1 0 6567 5870 1 1062 510 368 42 80 chrX 62621813 62622098 -104028198 - MLT1D LTR MaLR -218 287 1 1 1062 1022 305 85 3 chrX 62622990 62623296 -104027000 - MTD LTR MaLR -14 405 75 1 1062 389 353 0 0 chrX 62623295 62623411 -104026885 - B3A SINE B2 -80 118 3 1 1062 38 22 0 0 chrX 62623612 62623657 -104026639 + AT_rich Low_complexity Low_complexity 1 45 0 1 1062 210 176 39 19 chrX 62624732 62624784 -104025512 + (TATG)n Simple_repeat Simple_repeat 1 53 0 1 1062 672 332 142 8 chrX 62624996 62625390 -104024906 - MT2A LTR ERVL -86 447 1 1 1062 1072 95 7 0 chrX 62625390 62625537 -104024759 + B1_Mus1 SINE Alu 1 148 0 1 1062 479 25 49 12 chrX 62625542 62625623 -104024673 + (CAAAA)n Simple_repeat Simple_repeat 2 85 0 1 1062 27 29 0 0 chrX 62625765 62625799 -104024497 + AT_rich Low_complexity Low_complexity 1 34 0 1 1062 1249 43 0 0 chrX 62625845 62626006 -104024290 + L1Md_F2 LINE L1 6410 6570 -12 1 1062 43 0 0 0 chrX 62626886 62626929 -104023367 + AT_rich Low_complexity Low_complexity 1 43 0 1 1062 29388 99 18 24 chrX 62627071 62628412 -104021884 - L1Md_F2 LINE L1 0 6582 5245 1 1062 477 0 0 0 chrX 62628412 62628465 -104021831 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 1062 29388 95 35 43 chrX 62628465 62632555 -104017741 - L1Md_F2 LINE L1 -639 5244 1193 1 1062 270 0 0 0 chrX 62632555 62632585 -104017711 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 1062 5993 99 9 73 chrX 62632585 62632788 -104017508 - L1Md_F2 LINE L1 -5446 1192 995 1 1062 4314 24 0 0 chrX 62632788 62633279 -104017017 - MT2_Mm LTR ERVL 0 493 3 1 1062 5993 99 9 73 chrX 62633279 62633921 -104016375 - L1Md_F2 LINE L1 -5644 994 409 1 1062 21 0 0 0 chrX 62634592 62634613 -104015683 + AT_rich Low_complexity Low_complexity 1 21 0 1 1062 517 209 0 30 chrX 62634806 62634939 -104015357 - Lx9 LINE L1 -1 7643 7515 1 1062 1366 232 82 56 chrX 62634960 62635302 -104014994 + ORR1B2 LTR MaLR 5 355 -12 1 1062 467 177 50 66 chrX 62635310 62635340 -104014956 - Lx9 LINE L1 -162 7482 7453 1 1062 1134 44 0 0 chrX 62635340 62635477 -104014819 + B1_Mm SINE Alu 1 137 -10 1 1062 639 0 0 0 chrX 62635477 62635548 -104014748 + (CAAAA)n Simple_repeat Simple_repeat 2 72 0 1 1062 1454 220 245 14 chrX 62635548 62635978 -104014318 - Lx9 LINE L1 -192 7452 6923 1 1062 1359 229 110 22 chrX 62635990 62636028 -104014268 + Lx9 LINE L1 6543 6580 -1064 1 1062 3843 150 124 62 chrX 62636028 62636881 -104013415 + RMER17A2 LTR ERVK 1 906 0 1 1062 1359 229 110 22 chrX 62636881 62637159 -104013137 + Lx9 LINE L1 6581 6887 -757 1 1062 7287 95 10 2 chrX 62637397 62639031 -104011265 + L1_Mus1 LINE L1 4912 6565 -2 1 1062 645 137 8 15 chrX 62639976 62640109 -104010187 + (TA)n Simple_repeat Simple_repeat 2 133 0 1 1062 267 351 13 0 chrX 62640419 62640496 -104009800 + ID4 SINE ID 1 78 -5 1 1062 3420 127 3 78 chrX 62640497 62641096 -104009200 - L1_Mus3 LINE L1 -3 6635 6082 1 1062 5404 119 11 1 chrX 62641096 62642200 -104008096 + L1_Mus3 LINE L1 4976 6418 -632 1 1062 30369 90 2 16 chrX 62642777 62648041 -104002255 + L1Md_F2 LINE L1 395 5586 -297 1 1062 7619 66 0 6 chrX 62648042 62649030 -104001266 + L1Md_F2 LINE L1 5588 6569 -13 1 1062 365 91 0 0 chrX 62649147 62649202 -104001094 - L1_Mus2 LINE L1 -1 6565 6511 1 132 13464 137 39 19 chrX 62649206 62652593 -103997703 - L1VL2 LINE L1 -2273 3870 395 1 1063 222 91 0 0 chrX 62653214 62653247 -103997049 + (TAA)n Simple_repeat Simple_repeat 1 33 0 1 1063 215 170 0 21 chrX 62653293 62653341 -103996955 + CT-rich Low_complexity Low_complexity 4 50 0 1 1063 995 151 41 20 chrX 62653728 62653924 -103996372 - Lx2 LINE L1 0 6997 6798 1 1063 2084 77 0 88 chrX 62653924 62654267 -103996029 + L1Md_F2 LINE L1 6268 6580 -2 2 1063 2064 117 0 20 chrX 62654307 62654603 -103995693 - Lx2 LINE L1 -213 6784 6495 1 1063 25 99 0 0 chrX 62654893 62654974 -103995322 + AT_rich Low_complexity Low_complexity 1 81 0 2 1063 193 254 18 35 chrX 62655494 62655551 -103994745 + L4 LINE RTE 1718 1773 -256 2 1063 309 109 0 0 chrX 62656278 62656333 -103993963 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 2 1063 2957 34 0 0 chrX 62656513 62656867 -103993429 - L1Md_A LINE L1 -1 6581 6228 2 1063 38407 6 0 1 chrX 62659774 62665562 -103984734 + L1Md_A LINE L1 1 5586 -297 2 1063 9014 3 0 0 chrX 62665562 62666558 -103983738 + L1Md_A LINE L1 5587 6582 0 2 1063 1367 234 32 22 chrX 62666558 62666602 -103983694 + L1MD LINE L1 5616 5664 -578 2 1063 363 281 94 94 chrX 62666725 62666992 -103983304 + MLT1C LTR MaLR 1 267 -200 2 1063 733 281 43 26 chrX 62667139 62667582 -103982714 + Lx9 LINE L1 7160 7640 -4 2 1063 20286 158 34 18 chrX 62667606 62669289 -103981007 + Lx4A LINE L1 1334 3047 -2830 2 1063 837 56 0 0 chrX 62669289 62669396 -103980900 + (GGA)n Simple_repeat Simple_repeat 3 109 0 2 1063 20286 158 34 18 chrX 62669396 62669480 -103980816 + Lx4A LINE L1 3048 3141 -2736 2 1063 635 47 23 0 chrX 62669480 62669566 -103980730 + (GAAAA)n Simple_repeat Simple_repeat 3 90 0 2 1063 20286 158 34 18 chrX 62669566 62671771 -103978525 + Lx4A LINE L1 3142 5370 -507 2 1063 6541 74 1 4 chrX 62671768 62672713 -103977583 - L1Md_F2 LINE L1 -647 5935 4996 2 1063 4769 75 5 2 chrX 62672713 62673339 -103976957 + L1Md_F2 LINE L1 5942 6569 -13 2 1063 7809 168 35 12 chrX 62673345 62675004 -103975292 + Lx4A LINE L1 5351 7058 0 2 1063 259 45 22 22 chrX 62675087 62675133 -103975163 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 2 1063 375 173 0 0 chrX 62675833 62675914 -103974382 + CT-rich Low_complexity Low_complexity 3 83 0 2 1063 630 39 0 0 chrX 62675914 62675991 -103974305 + (TA)n Simple_repeat Simple_repeat 2 78 0 2 1063 333 0 0 0 chrX 62675991 62676027 -103974269 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1063 4744 128 6 1 chrX 62677514 62678235 -103972061 - Lx2 LINE L1 -9 6988 6265 2 1063 844 341 142 31 chrX 62678259 62679089 -103971207 + L1M4b LINE L1 762 1683 -5651 2 1063 880 346 11 3 chrX 62679092 62679376 -103970920 + B4A SINE B4 7 292 0 2 1063 276 30 0 0 chrX 62680152 62680185 -103970111 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1063 198 0 0 0 chrX 62680385 62680407 -103969889 + (TTTG)n Simple_repeat Simple_repeat 4 25 0 2 1063 229 359 0 0 chrX 62680467 62680545 -103969751 + ID2 SINE ID 3 80 -3 2 1063 199 228 69 17 chrX 62681257 62681315 -103968981 - MIRc SINE MIR -66 202 142 2 1063 300 408 0 7 chrX 62681510 62681663 -103968633 + MER5A DNA MER1_type 37 188 -1 2 1063 388 263 63 48 chrX 62682288 62682610 -103967686 + L1M3 LINE L1 4901 5226 -914 2 1063 664 320 67 0 chrX 62682631 62682825 -103967471 - B3 SINE B2 -5 211 5 2 1063 479 254 0 17 chrX 62683079 62683195 -103967101 - Lx4B LINE L1 -6 7052 6939 2 1063 664 337 24 48 chrX 62684110 62684400 -103965896 + MLT1B LTR MaLR 6 288 -102 2 1063 209 59 0 56 chrX 62684942 62684978 -103965318 + (TAA)n Simple_repeat Simple_repeat 1 34 0 2 1063 2045 264 29 16 chrX 62685015 62685562 -103964734 - Lx9 LINE L1 -793 6851 6298 2 1063 306 0 0 0 chrX 62685563 62685597 -103964699 + (CTTA)n Simple_repeat Simple_repeat 2 35 0 2 1063 249 33 0 0 chrX 62685772 62685802 -103964494 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2 1063 5107 176 25 26 chrX 62685802 62686790 -103963506 - Lx4A LINE L1 -5 7053 6067 2 1063 422 250 121 7 chrX 62686790 62686931 -103963365 - MTD-int LTR MaLR -1097 161 5 2 1063 1340 271 75 14 chrX 62686940 62687311 -103962985 - MTD LTR MaLR -9 410 17 2 1063 558 359 103 32 chrX 62687484 62687766 -103962530 + ORR1E LTR MaLR 1 302 -57 2 1063 302 0 0 26 chrX 62687780 62687819 -103962477 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 2 1063 480 89 0 0 chrX 62688277 62688356 -103961940 + (T)n Simple_repeat Simple_repeat 1 79 0 2 1063 388 315 14 7 chrX 62688377 62688524 -103961772 - B1_Mur1 SINE Alu -1 148 1 2 1063 3874 174 16 3 chrX 62688821 62689557 -103960739 - L1_Mm LINE L1 -846 5037 4292 2 1063 2563 127 48 0 chrX 62689558 62689974 -103960322 + L1_Mus4 LINE L1 6201 6636 0 2 1063 1005 67 0 0 chrX 62690053 62690187 -103960109 + (GAA)n Simple_repeat Simple_repeat 2 135 0 2 1063 743 201 8 0 chrX 62690193 62690327 -103959969 - Lx4B LINE L1 -604 6454 6320 2 1063 28 0 0 0 chrX 62690327 62690355 -103959941 + AT_rich Low_complexity Low_complexity 1 28 0 2 1063 1701 85 4 12 chrX 62690357 62690606 -103959690 - L1_Mus2 LINE L1 -1 6565 6319 2 1063 1314 201 10 41 chrX 62690631 62690922 -103959374 + Lx4B LINE L1 6777 7058 0 2 1063 1770 216 78 37 chrX 62690931 62691177 -103959119 - RMER6B LTR ERVK -10 451 203 2 1063 221 0 35 0 chrX 62691177 62691206 -103959090 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 2 1063 1770 216 78 37 chrX 62691206 62691392 -103958904 - RMER6B LTR ERVK -259 202 1 2 1063 562 271 15 0 chrX 62691703 62691836 -103958460 - B1_Mur2 SINE Alu -10 139 5 2 1063 500 254 22 73 chrX 62692005 62692141 -103958155 + B1_Mus1 SINE Alu 6 134 -14 2 1063 496 248 62 49 chrX 62692180 62692324 -103957972 + PB1D9 SINE Alu 4 149 -1 2 1063 193 29 29 29 chrX 62692346 62692381 -103957915 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1063 24 0 0 0 chrX 62693222 62693246 -103957050 + AT_rich Low_complexity Low_complexity 1 24 0 2 1063 2396 120 16 5 chrX 62693246 62693630 -103956666 - Lx3C LINE L1 -277 6699 6312 2 1063 490 258 220 45 chrX 62693673 62693986 -103956310 - RLTR9A LTR ERVK 0 368 1 2 1063 4829 91 34 3 chrX 62694546 62695230 -103955066 - L1Md_F2 LINE L1 -1 6581 5877 2 1063 25 0 0 0 chrX 62695587 62695612 -103954684 + AT_rich Low_complexity Low_complexity 1 25 0 2 1063 574 210 53 92 chrX 62695773 62695885 -103954411 - Lx9 LINE L1 -1 7643 7533 2 1063 189 0 0 0 chrX 62695885 62695906 -103954390 + (TA)n Simple_repeat Simple_repeat 2 22 0 2 1063 423 0 0 0 chrX 62695906 62695952 -103954344 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1063 574 210 53 92 chrX 62695952 62696142 -103954154 - Lx9 LINE L1 -112 7532 7353 2 1063 714 240 88 10 chrX 62696316 62696510 -103953786 - Lx6 LINE L1 -2 7458 7250 2 1063 441 320 0 0 chrX 62696525 62696647 -103953649 - Lx8 LINE L1 -378 7095 6974 2 1063 918 156 0 0 chrX 62696677 62696818 -103953478 + MTC LTR MaLR 225 365 -56 2 1063 303 239 96 12 chrX 62696846 62696978 -103953318 + ORR1D1 LTR MaLR 169 321 -53 2 1063 314 0 0 0 chrX 62697298 62697340 -103952956 + L1Md_F3 LINE L1 6529 6570 -14 2 1063 434 263 0 10 chrX 62698456 62698556 -103951740 + MTC-int LTR MaLR 731 829 -429 2 1063 2032 193 8 9 chrX 62698964 62699495 -103950801 + L1_Mur2 LINE L1 889 1417 -4460 2 1063 982 173 198 4 chrX 62699498 62699736 -103950560 + Lx4B LINE L1 6556 6839 -219 2 1063 1378 214 39 51 chrX 62699740 62700153 -103950143 - RMER17C LTR ERVK -2 408 1 2 1063 750 219 20 30 chrX 62700437 62700639 -103949657 - RMER17B LTR ERVK -576 382 183 2 1063 549 274 4 132 chrX 62700643 62700900 -103949396 + Lx4B LINE L1 6835 7058 0 2 1063 21 0 0 0 chrX 62700900 62700921 -103949375 + AT_rich Low_complexity Low_complexity 1 21 0 2 1063 280 329 48 7 chrX 62701522 62701669 -103948627 + MER21-int LTR ERV1 2088 2240 -1951 2 1063 279 311 9 28 chrX 62701696 62701805 -103948491 + MER21-int LTR ERV1 2339 2445 -1746 2 1063 620 356 33 12 chrX 62702041 62702376 -103947920 + MER21-int LTR ERV1 2761 3102 -1089 2 1063 1509 180 210 3 chrX 62702411 62702735 -103947561 - ORR1B1 LTR MaLR 0 394 4 2 1063 4778 182 71 10 chrX 62702738 62703700 -103946596 - ORR1B1-int LTR MaLR 0 1963 944 2 1063 182 367 124 19 chrX 62704976 62705137 -103945159 + MIR SINE MIR 34 211 -51 2 1063 28 61 0 0 chrX 62705208 62705257 -103945039 + AT_rich Low_complexity Low_complexity 1 49 0 2 1063 188 295 36 60 chrX 62706913 62706996 -103943300 - MER5B DNA MER1_type -21 157 77 2 1063 4885 221 59 17 chrX 62707147 62708260 -103942036 - Lx5 LINE L1 0 7050 5891 2 1063 1359 131 45 5 chrX 62708250 62708473 -103941823 + Lx5 LINE L1 5539 5770 -107 2 1063 503 256 88 152 chrX 62708645 62709008 -103941288 - ETnERV2-int LTR ERVK -981 6425 6086 2 1063 12602 157 73 22 chrX 62709005 62710284 -103940012 - RMER16-int LTR ERVK -1230 4176 2874 2 1063 477 0 0 0 chrX 62710284 62710337 -103939959 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 1063 339 25 0 0 chrX 62710338 62710378 -103939918 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1063 12602 161 72 27 chrX 62710378 62711702 -103938594 - RMER16-int LTR ERVK -3475 3931 1566 2 1063 246 32 0 0 chrX 62711702 62711733 -103938563 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1063 10447 198 58 79 chrX 62711733 62713178 -103937118 - ETnERV2-int LTR ERVK -4857 2549 1196 2 1063 2437 219 47 95 chrX 62713178 62714076 -103936220 - RLTR13A LTR ERVK 0 855 1 2 1063 10447 198 58 79 chrX 62714076 62714221 -103936075 - ETnERV2-int LTR ERVK -6211 1195 1077 2 1063 216 0 0 0 chrX 62714282 62714306 -103935990 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 1063 591 98 0 0 chrX 62714306 62714398 -103935898 + (TTTTA)n Simple_repeat Simple_repeat 3 94 0 2 1063 1914 156 31 8 chrX 62714640 62714996 -103935300 - RLTR9A LTR ERVK 0 368 5 2 1063 555 135 48 9 chrX 62715004 62715109 -103935187 + Lx5 LINE L1 5772 5880 -1170 2 1063 303 394 40 10 chrX 62715561 62715861 -103934435 + L1MC3 LINE L1 7159 7467 -318 2 1063 440 320 75 0 chrX 62715877 62716077 -103934219 - MLT1B LTR MaLR -7 383 169 2 1063 1064 138 82 0 chrX 62716475 62716670 -103933626 + Lx LINE L1 6444 6654 0 2 1063 271 208 0 0 chrX 62716905 62716958 -103933338 + MT2A LTR ERVL 212 264 -269 2 1063 429 270 10 0 chrX 62716973 62717073 -103933223 + MT2A LTR ERVL 347 447 -86 2 1063 23 54 0 0 chrX 62717092 62717129 -103933167 + AT_rich Low_complexity Low_complexity 1 37 0 2 1063 4442 190 47 80 chrX 62717459 62717503 -103932793 + L1_Mur3 LINE L1 1790 1836 -4044 2 1063 1096 66 7 0 chrX 62717503 62717639 -103932657 + B1_Mus1 SINE Alu 3 139 -9 2 1063 290 24 48 0 chrX 62717639 62717681 -103932615 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 2 1063 4442 190 47 80 chrX 62717681 62718942 -103931354 + L1_Mur3 LINE L1 1837 3051 -2829 2 1063 1379 96 0 14 chrX 62719007 62719218 -103931078 + L1_Mm LINE L1 3644 3851 -2032 2 1063 245 288 99 0 chrX 62719249 62719360 -103930936 + L1_Mur3 LINE L1 5381 5502 -378 2 1063 22 35 0 0 chrX 62719579 62719608 -103930688 + AT_rich Low_complexity Low_complexity 1 29 0 2 1063 5874 60 3 0 chrX 62719981 62720727 -103929569 + L1Md_F2 LINE L1 5834 6581 -1 3 1063 29 0 0 0 chrX 62720879 62720908 -103929388 + AT_rich Low_complexity Low_complexity 1 29 0 3 1063 815 70 0 9 chrX 62721752 62721868 -103928428 + (TCTCC)n Simple_repeat Simple_repeat 4 118 0 3 1063 30672 94 15 5 chrX 62722589 62727590 -103922706 + L1Md_F2 LINE L1 533 5585 -298 3 1063 7523 71 1 7 chrX 62727591 62728593 -103921703 + L1Md_F2 LINE L1 5587 6582 0 3 1063 255 31 0 0 chrX 62728627 62728659 -103921637 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 1063 254 255 112 9 chrX 62729027 62729134 -103921162 + L1_Mur3 LINE L1 585 702 -7026 3 1063 708 305 79 50 chrX 62729214 62729694 -103920602 + MER67C LTR ERV1 17 510 -201 3 1063 2932 185 45 4 chrX 62729831 62730384 -103919912 - RLTR21 LTR ERVK -995 577 2 3 1063 322 152 0 33 chrX 62730386 62730447 -103919849 + L1_Mur3 LINE L1 4503 4561 -1316 3 1063 3508 84 40 2 chrX 62730448 62730973 -103919323 + MusHAL1 LINE L1 2021 2565 -147 3 1063 1977 179 37 22 chrX 62730976 62731034 -103919262 + L1_Mur3 LINE L1 4565 4622 -1255 3 1063 333 0 0 0 chrX 62731034 62731071 -103919225 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1063 1977 179 37 22 chrX 62731071 62731417 -103918879 + L1_Mur3 LINE L1 4623 4974 -903 3 1063 768 261 144 30 chrX 62731414 62731845 -103918451 - L1_Mur3 LINE L1 -1101 4779 4300 3 1063 694 220 6 6 chrX 62731894 62732072 -103918224 + CT-rich Low_complexity Low_complexity 3 180 0 3 1063 216 97 0 0 chrX 62732295 62732326 -103917970 + (TA)n Simple_repeat Simple_repeat 2 32 0 3 1063 333 348 90 30 chrX 62732344 62732676 -103917620 + L2a LINE L2 3075 3426 0 3 1063 381 58 0 0 chrX 62733567 62733619 -103916677 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1063 332 301 24 0 chrX 62733999 62734082 -103916214 - MER63D DNA AcHobo -694 367 283 3 1063 240 360 48 0 chrX 62734407 62734554 -103915742 - Lx8 LINE L1 -320 7153 7000 3 1063 188 364 39 0 chrX 62735198 62735275 -103915021 - L2 LINE L2 -546 2873 2794 3 1063 197 65 32 0 chrX 62735590 62735621 -103914675 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 1063 1035 113 0 0 chrX 62736796 62736938 -103913358 - B1_Mus2 SINE Alu -5 142 1 3 1063 2127 231 8 20 chrX 62737633 62738129 -103912167 + RMER20A LTR ERVK 20 509 -7 3 1063 8563 126 33 5 chrX 62738157 62740031 -103910265 + Lx3A LINE L1 5048 6970 -11 3 1063 22 35 0 0 chrX 62740031 62740060 -103910236 + AT_rich Low_complexity Low_complexity 1 29 0 3 1063 6475 233 136 78 chrX 62740099 62742377 -103907919 + L1_Mur3 LINE L1 1994 4625 -1255 3 1063 198 103 0 0 chrX 62742377 62742406 -103907890 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3 1063 6475 233 136 78 chrX 62742406 62743081 -103907215 + L1_Mur3 LINE L1 4626 5116 -764 3 1063 3195 67 24 0 chrX 62743077 62743493 -103906803 - L1Md_F2 LINE L1 -246 6336 5911 3 1063 1552 73 5 9 chrX 62743499 62743719 -103906577 + L1_Mus2 LINE L1 6347 6565 -1 3 1063 616 193 17 0 chrX 62743728 62743847 -103906449 + L1_Mur3 LINE L1 5102 5222 -655 3 1063 300 53 0 0 chrX 62743850 62743888 -103906408 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1063 423 0 0 0 chrX 62743888 62743934 -103906362 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 1063 493 284 9 43 chrX 62744046 62744169 -103906127 - L1_Rod LINE L1 -3179 2668 2547 3 1063 4467 86 4 88 chrX 62744169 62744894 -103905402 + L1_Mus2 LINE L1 5902 6565 -1 3 1063 493 284 9 43 chrX 62744894 62744980 -103905316 - L1_Rod LINE L1 -3301 2546 2466 3 1063 1350 243 66 23 chrX 62745557 62745949 -103904347 - Lx2B LINE L1 -4 6996 6588 3 1063 185 222 14 113 chrX 62746177 62746248 -103904048 + MIR3 SINE MIR 112 175 -33 3 1063 21 0 0 0 chrX 62747223 62747244 -103903052 + AT_rich Low_complexity Low_complexity 1 21 0 3 1063 1126 82 0 0 chrX 62748756 62748903 -103901393 + B1_Mus2 SINE Alu 1 147 0 3 1063 999 342 27 32 chrX 62750925 62751399 -103898897 - Lx8 LINE L1 -771 6702 6231 3 1063 913 309 67 9 chrX 62751414 62751741 -103898555 + Lx8 LINE L1 6721 7066 -407 3 1063 358 296 200 0 chrX 62751839 62751974 -103898322 + Lx8 LINE L1 7065 7226 -247 3 1063 334 270 22 76 chrX 62752103 62752253 -103898043 + ORR1D2 LTR MaLR 1 142 -232 3 1063 1476 79 23 23 chrX 62752274 62752493 -103897803 - L1_Mus1 LINE L1 0 6567 6349 3 1063 706 260 21 111 chrX 62752500 62752555 -103897741 + ORR1D2 LTR MaLR 156 197 -173 3 1063 936 120 0 60 chrX 62752555 62752706 -103897590 + B1_Mus1 SINE Alu 1 142 -6 3 1063 207 0 0 0 chrX 62752709 62752732 -103897564 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 1063 706 260 21 111 chrX 62752732 62752906 -103897390 + ORR1D2 LTR MaLR 198 368 -2 3 1063 3953 104 3 1 chrX 62752926 62753777 -103896519 - L1_Mus3 LINE L1 -516 6122 5271 3 1063 3610 102 8 0 chrX 62753777 62754289 -103896007 + L1_Mus3 LINE L1 6121 6636 -2 3 1063 359 333 0 70 chrX 62755147 62755224 -103895072 + ID_B1 SINE B4 93 161 -63 3 1063 6256 107 82 10 chrX 62755224 62756188 -103894108 + RLTR13D4 LTR ERVK 1 1033 0 3 1063 359 333 0 70 chrX 62756188 62756252 -103894044 + ID_B1 SINE B4 162 224 0 3 1063 4837 164 62 5 chrX 62757351 62758358 -103891938 - L1Md_F3 LINE L1 -2 6582 5513 3 1063 1609 214 23 0 chrX 62758364 62758714 -103891582 + Lx2B LINE L1 6326 6683 -317 3 1063 1991 98 37 3 chrX 62758715 62759012 -103891284 + IAPLTR2b LTR ERVK 1 307 -20 3 1063 14428 128 40 27 chrX 62759032 62761472 -103888824 + IAPEz-int LTR ERVK 21 2665 -3816 3 1063 11677 128 13 10 chrX 62761468 62763956 -103886340 + IAPEz-int LTR ERVK 4067 6801 -20 3 1063 2022 98 36 3 chrX 62763956 62764262 -103886034 + IAPLTR2b LTR ERVK 1 316 -11 3 1063 595 199 218 24 chrX 62764308 62764509 -103885787 + Lx2B LINE L1 6747 7012 -46 3 1063 23 33 0 0 chrX 62765004 62765034 -103885262 + AT_rich Low_complexity Low_complexity 1 30 0 3 1063 191 342 145 0 chrX 62765410 62765486 -103884810 - MIRm SINE MIR -31 245 159 3 1063 421 202 33 8 chrX 62765509 62765629 -103884667 + Lx9 LINE L1 7513 7635 -9 3 1063 705 284 55 16 chrX 62765659 62765745 -103884551 + L1M2 LINE L1 4784 4868 -1275 3 1063 1320 258 48 41 chrX 62765745 62766161 -103884135 + MTD LTR MaLR 1 419 0 3 1063 705 284 55 16 chrX 62766161 62766382 -103883914 + L1M2 LINE L1 4869 5103 -1040 3 1063 3374 26 116 19 chrX 62766396 62766829 -103883467 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1063 5879 71 8 10 chrX 62766855 62767680 -103882616 + RLTR22_Mus LTR ERVK 2 825 -983 3 1063 1619 120 31 11 chrX 62767922 62768183 -103882113 + RLTR22_Mus LTR ERVK 1543 1808 0 3 1063 523 312 46 114 chrX 62768189 62768821 -103881475 + L1_Mur3 LINE L1 5097 5685 -195 3 1063 372 294 46 52 chrX 62768860 62769054 -103881242 - Lx8 LINE L1 -519 6954 6762 3 1063 270 0 0 0 chrX 62769899 62769929 -103880367 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 3 1063 548 147 210 0 chrX 62769951 62770094 -103880202 + Lx2B LINE L1 6826 6998 -2 3 1063 532 280 159 131 chrX 62770450 62770808 -103879488 - RLTR9A LTR ERVK 0 368 1 3 1063 2098 171 116 41 chrX 62771346 62771949 -103878347 - RMER16-int LTR ERVK -4427 979 192 3 1063 414 0 0 0 chrX 62772066 62772112 -103878184 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 3 1063 444 260 63 57 chrX 62772436 62772595 -103877701 - RLTR9B LTR ERVK 0 437 278 3 1063 310 195 25 49 chrX 62772636 62772717 -103877579 - RLTR9B LTR ERVK -288 80 2 3 1063 1398 255 36 22 chrX 62773739 62774096 -103876200 + ORR1D1 LTR MaLR 1 362 -12 3 1063 28 29 0 0 chrX 62774307 62774342 -103875954 + AT_rich Low_complexity Low_complexity 1 35 0 3 1063 470 381 0 0 chrX 62774357 62774491 -103875805 - RSINE1 SINE B4 -29 136 3 3 1063 517 321 120 4 chrX 62775023 62775264 -103875032 - Lx8 LINE L1 -319 7154 6886 3 1063 3740 40 0 4 chrX 62775331 62775786 -103874510 + L1Md_F2 LINE L1 6128 6580 -2 3 1063 1394 85 5 0 chrX 62775805 62775993 -103874303 + B2_Mm2 SINE B2 1 189 -6 3 1063 8836 113 6 19 chrX 62776205 62777838 -103872458 + Lx3A LINE L1 5372 6973 -8 3 1063 261 184 105 0 chrX 62777867 62777943 -103872353 - Lx6 LINE L1 -19 7441 7358 3 1063 414 0 0 0 chrX 62778139 62778185 -103872111 + (TC)n Simple_repeat Simple_repeat 2 47 0 3 1063 261 182 0 0 chrX 62778665 62778720 -103871576 + GA-rich Low_complexity Low_complexity 4 58 0 3 1063 1796 174 95 51 chrX 62778885 62779194 -103871102 - ORR1B1 LTR MaLR -8 386 61 3 1063 2303 89 3 21 chrX 62779194 62779527 -103870769 - L1_Mus1 LINE L1 -4 6563 6237 3 1063 1796 174 95 51 chrX 62779527 62779587 -103870709 - ORR1B1 LTR MaLR -334 60 1 3 1063 1531 166 43 10 chrX 62779679 62779983 -103870313 + Lx LINE L1 6341 6654 0 3 1063 2406 179 5 0 chrX 62780567 62781014 -103869282 - L1_Mur2 LINE L1 -1569 4308 3860 3 1063 7197 182 24 2 chrX 62781017 62782412 -103867884 + L1_Mm LINE L1 4311 5736 -147 3 1063 500 176 0 0 chrX 62782426 62782511 -103867785 + 4.5SRNA scRNA scRNA 1 85 -9 3 1063 266 316 0 0 chrX 62782588 62782645 -103867651 + RSINE1 SINE B4 26 82 -83 3 1063 2676 111 26 0 chrX 62782645 62783033 -103867263 - MTB LTR MaLR 0 400 3 3 132 3950 208 5 3 chrX 62783039 62783788 -103866508 + Lx LINE L1 5904 6654 0 3 1064 30586 105 4 6 chrX 62783797 62788993 -103861303 + L1Md_F2 LINE L1 446 5581 -302 3 1064 7034 84 27 2 chrX 62788998 62789969 -103860327 + L1Md_F2 LINE L1 5587 6581 -1 3 1064 212 171 0 0 chrX 62790631 62790666 -103859630 + (CATA)n Simple_repeat Simple_repeat 4 38 0 3 1064 336 24 0 0 chrX 62790680 62790721 -103859575 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1064 631 193 0 18 chrX 62791240 62791409 -103858887 + GA-rich Low_complexity Low_complexity 3 168 0 3 1064 1010 142 0 11 chrX 62792182 62792367 -103857929 - Lx3A LINE L1 -3 6978 6796 3 1064 1121 157 97 40 chrX 62792917 62793143 -103857153 + Lx4A LINE L1 6461 6699 -359 3 1064 38423 6 1 1 chrX 62793143 62798935 -103851361 + L1Md_A LINE L1 1 5586 -297 3 1064 9026 2 0 0 chrX 62798935 62799931 -103850365 + L1Md_A LINE L1 5587 6582 0 3 1064 189 0 0 0 chrX 62799946 62799967 -103850329 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1064 2191 166 36 16 chrX 62799968 62800353 -103849943 + Lx4A LINE L1 6660 7052 -6 3 1064 309 26 0 0 chrX 62800372 62800410 -103849886 + (GAA)n Simple_repeat Simple_repeat 2 39 0 3 1064 31 26 0 0 chrX 62800425 62800463 -103849833 + AT_rich Low_complexity Low_complexity 1 38 0 3 1064 7288 77 7 3 chrX 62800611 62801588 -103848708 - L1_Mus1 LINE L1 0 6567 5602 3 1064 26 0 0 0 chrX 62804405 62804431 -103845865 + AT_rich Low_complexity Low_complexity 1 26 0 3 1064 190 125 20 20 chrX 62804501 62804550 -103845746 + (TTTG)n Simple_repeat Simple_repeat 4 52 0 3 1064 691 305 8 14 chrX 62804978 62805195 -103845101 - B3A SINE B2 0 216 1 3 1064 550 189 133 19 chrX 62805288 62805498 -103844798 + Lx9 LINE L1 7411 7644 0 3 1064 27758 103 52 10 chrX 62806203 62811333 -103838963 + L1Md_F2 LINE L1 238 5587 -296 3 1064 7641 71 0 9 chrX 62811334 62812337 -103837959 + L1Md_F2 LINE L1 5589 6582 0 3 1064 519 355 30 50 chrX 62812498 62812724 -103837572 + B4A SINE B4 2 230 -62 3 1064 426 125 9 63 chrX 62812724 62812835 -103837461 + L1_Mus3 LINE L1 6533 6637 -1 3 1064 519 355 30 50 chrX 62812835 62812905 -103837391 + B4A SINE B4 231 292 0 3 1064 450 333 60 73 chrX 62813218 62813587 -103836709 - MLT1B LTR MaLR -26 364 1 4 1064 338 335 94 58 chrX 62813847 62813994 -103836302 + B3A SINE B2 21 180 -18 4 1064 360 0 0 0 chrX 62813994 62814034 -103836262 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1064 338 335 94 58 chrX 62814034 62814057 -103836239 + B3A SINE B2 181 197 -1 4 1064 427 345 36 0 chrX 62814566 62814705 -103835591 + RSINE1 SINE B4 3 146 -19 4 1064 321 68 0 0 chrX 62814733 62814777 -103835519 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1064 30 0 0 0 chrX 62814784 62814814 -103835482 + AT_rich Low_complexity Low_complexity 1 30 0 4 1064 245 279 134 37 chrX 62815136 62815270 -103835026 + L1MC1 LINE L1 5886 6032 -301 4 1064 478 339 90 5 chrX 62815321 62815543 -103834753 - RMER15 LTR ERVL -36 539 299 4 1064 236 247 0 0 chrX 62815567 62815644 -103834652 + A-rich Low_complexity Low_complexity 1 77 0 4 1064 236 253 31 52 chrX 62815739 62815835 -103834461 - RMER15 LTR ERVL -481 94 1 4 1064 351 289 26 45 chrX 62816675 62816831 -103833465 + L1ME1 LINE L1 6012 6164 -15 4 1064 318 288 25 0 chrX 62817208 62817288 -103833008 + L2a LINE L2 3345 3426 0 4 1064 356 295 54 0 chrX 62818260 62818389 -103831907 - MTC-int LTR MaLR -56 1202 1067 4 1064 425 310 51 17 chrX 62818423 62818684 -103831612 + Lx9 LINE L1 5810 6062 -1582 4 1064 25 0 0 0 chrX 62818832 62818857 -103831439 + AT_rich Low_complexity Low_complexity 1 25 0 4 1064 3367 230 27 86 chrX 62820604 62821639 -103828657 + Lx5 LINE L1 6076 7049 -1 4 1064 2638 108 32 5 chrX 62821822 62822232 -103828064 + BGLII LTR ERVK 1 421 0 4 1064 2207 111 3 6 chrX 62822324 62822651 -103827645 - IAPLTR3 LTR ERVK 0 326 1 4 1064 3971 110 7 7 chrX 62822651 62823218 -103827078 - IAPLTR3-int LTR ERVK -20 6801 6235 4 1064 26177 46 3 5 chrX 62823228 62826552 -103823744 + L1_Mm LINE L1 1885 5200 -683 4 1064 43497 43 11 4 chrX 62826552 62828085 -103822211 - IAPLTR3-int LTR ERVK -1240 5581 4052 4 1064 1829 51 21 4 chrX 62828085 62828323 -103821973 + L1Md_F3 LINE L1 6343 6584 0 4 1064 43497 43 11 4 chrX 62828323 62832026 -103818270 - IAPLTR3-int LTR ERVK -2770 4051 311 4 1064 198 0 0 0 chrX 62832307 62832329 -103817967 + (TATAA)n Simple_repeat Simple_repeat 5 26 0 4 1064 3730 57 13 0 chrX 62832554 62833028 -103817268 - L1Md_F2 LINE L1 -12 6570 6091 4 1064 243 0 0 0 chrX 62833031 62833058 -103817238 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1064 25 0 0 0 chrX 62833619 62833644 -103816652 + AT_rich Low_complexity Low_complexity 1 25 0 4 1064 229 349 80 35 chrX 62835327 62835363 -103814933 - B2_Mm1a SINE B2 -66 127 86 4 1064 297 0 0 0 chrX 62835363 62835396 -103814900 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1064 229 349 80 35 chrX 62835396 62835472 -103814824 - B2_Mm1a SINE B2 -108 85 10 4 1064 25 0 0 0 chrX 62835657 62835682 -103814614 + AT_rich Low_complexity Low_complexity 1 25 0 4 1064 229 359 40 57 chrX 62835988 62836165 -103814131 - Lx8 LINE L1 -337 7136 6963 4 1064 282 29 0 0 chrX 62836273 62836308 -103813988 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1064 474 18 0 0 chrX 62836312 62836367 -103813929 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1064 383 308 16 32 chrX 62836388 62836512 -103813784 - Lx8 LINE L1 -723 6750 6629 4 1064 401 282 16 0 chrX 62836584 62836708 -103813588 - Lx8 LINE L1 -956 6517 6392 4 1064 4129 123 58 95 chrX 62836710 62837397 -103812899 - L1_Mur1 LINE L1 -610 5276 4620 4 1064 1059 95 0 33 chrX 62837397 62837549 -103812747 - B1_Mm SINE Alu 0 147 1 4 1064 4129 123 58 95 chrX 62837549 62837722 -103812574 - L1_Mur1 LINE L1 -1267 4619 4448 4 1064 414 0 0 0 chrX 62837722 62837768 -103812528 + (T)n Simple_repeat Simple_repeat 1 46 0 4 1064 5655 139 6 13 chrX 62837773 62838080 -103812216 + Lx3B LINE L1 5330 5636 -250 4 1064 4112 145 77 7 chrX 62838080 62838501 -103811795 + RMER17D2 LTR ERVK 1 475 -334 4 1064 1011 61 0 0 chrX 62838501 62838632 -103811664 + (TC)n Simple_repeat Simple_repeat 2 132 0 4 1064 4112 145 77 7 chrX 62838632 62838966 -103811330 + RMER17D2 LTR ERVK 476 809 0 4 1064 5655 132 39 17 chrX 62838966 62839863 -103810433 + Lx3B LINE L1 5634 6552 -421 4 1064 3236 72 34 5 chrX 62839865 62840309 -103809987 + L1_Mus2 LINE L1 6107 6563 -3 4 1064 2236 172 0 14 chrX 62840330 62840754 -103809542 + Lx3B LINE L1 6553 6970 -3 4 1064 26 0 0 0 chrX 62840762 62840788 -103809508 + AT_rich Low_complexity Low_complexity 1 26 0 4 1064 694 311 101 22 chrX 62840817 62841764 -103808532 - Lx8 LINE L1 -1106 6367 5340 4 1064 1045 125 57 0 chrX 62841764 62841940 -103808356 - L1_Mus3 LINE L1 -5 6633 6448 4 1064 599 307 151 14 chrX 62841940 62841988 -103808308 - Lx8 LINE L1 -541 5339 5285 4 1064 351 0 0 0 chrX 62842202 62842241 -103808055 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 1064 23 0 0 0 chrX 62842279 62842302 -103807994 + AT_rich Low_complexity Low_complexity 1 23 0 4 1064 848 120 7 0 chrX 62842389 62842539 -103807757 + (GGGAGA)n Simple_repeat Simple_repeat 1 151 0 4 1064 456 300 76 73 chrX 62842847 62843172 -103807124 - RLTR26 LTR ERVK -61 566 191 4 1064 208 125 50 0 chrX 62843600 62843640 -103806656 + A-rich Low_complexity Low_complexity 2 43 0 4 1064 366 346 45 53 chrX 62843914 62844228 -103806068 - MER47B DNA MER2_type -5 413 38 4 1064 3147 29 0 0 chrX 62844422 62844797 -103805499 - L1Md_F3 LINE L1 -543 6041 5667 4 1064 4346 43 9 4 chrX 62844797 62845336 -103804960 + L1Md_F3 LINE L1 6043 6584 0 4 1064 886 267 5 25 chrX 62846649 62846849 -103803447 + B3 SINE B2 14 209 -7 4 1064 271 314 69 19 chrX 62847431 62847548 -103802748 + MIR3 SINE MIR 3 129 -139 4 1064 231 61 0 0 chrX 62847816 62847849 -103802447 + (TAAAAA)n Simple_repeat Simple_repeat 3 35 0 4 1064 25 0 0 0 chrX 62848581 62848606 -103801690 + AT_rich Low_complexity Low_complexity 1 25 0 4 1064 2737 113 5 0 chrX 62848615 62849013 -103801283 - MTB LTR MaLR 0 400 1 4 1064 549 0 0 0 chrX 62849142 62849203 -103801093 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 1064 1134 82 0 0 chrX 62849203 62849349 -103800947 - B1_Mus1 SINE Alu -2 146 1 4 1064 748 360 85 12 chrX 62849387 62849716 -103800580 + MTEa LTR MaLR 27 379 0 4 1064 21 0 0 0 chrX 62850271 62850292 -103800004 + AT_rich Low_complexity Low_complexity 1 21 0 4 1064 321 302 119 4 chrX 62850430 62850683 -103799613 + MER33 DNA MER1_type 43 324 0 4 1064 542 318 11 53 chrX 62851119 62851308 -103798988 + Lx9 LINE L1 505 685 -6923 4 1064 1426 293 55 40 chrX 62851380 62851980 -103798316 + L1_Rod LINE L1 22 630 -6542 4 1064 387 0 0 0 chrX 62852081 62852124 -103798172 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 1064 2820 113 2 0 chrX 62852200 62852599 -103797697 - MTB LTR MaLR 0 400 1 4 1064 2145 264 35 50 chrX 62852772 62853449 -103796847 + Lx9 LINE L1 6370 7036 -608 4 1064 1451 217 44 18 chrX 62853720 62854043 -103796253 + L1_Mur1 LINE L1 883 1219 -5765 4 1064 207 0 0 0 chrX 62854043 62854066 -103796230 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 4 1064 1451 183 60 17 chrX 62854066 62854402 -103795894 + L1_Mur1 LINE L1 1216 1567 -4310 4 1064 2325 200 33 11 chrX 62854690 62855237 -103795059 + L1_Mur1 LINE L1 1536 2094 -3792 4 1064 3451 199 54 37 chrX 62855245 62856037 -103794259 + Lx4B LINE L1 6253 7058 0 4 1064 588 223 22 0 chrX 62856043 62856182 -103794114 + Lx9 LINE L1 7024 7165 -479 4 1064 410 234 399 17 chrX 62856254 62856487 -103793809 + Lx9 LINE L1 7323 7644 0 4 1064 342 0 0 0 chrX 62858068 62858106 -103792190 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 4 1064 27 49 0 0 chrX 62859487 62859528 -103790768 + AT_rich Low_complexity Low_complexity 1 41 0 4 1064 2403 200 45 8 chrX 62859862 62860391 -103789905 + Lx2B LINE L1 5820 6368 -632 4 1064 324 70 0 0 chrX 62860392 62860435 -103789861 + (TC)n Simple_repeat Simple_repeat 2 44 0 4 1064 989 308 89 20 chrX 62860517 62861067 -103789229 + Lx9 LINE L1 5376 6004 -1640 4 1064 559 288 18 18 chrX 62861117 62861283 -103789013 + Lx9 LINE L1 7083 7248 -396 4 1064 571 230 26 5 chrX 62861329 62861521 -103788775 + Lx2 LINE L1 5998 6193 -804 4 1064 1524 116 29 4 chrX 62861522 62861765 -103788531 - MusHAL1 LINE L1 -359 2353 2105 4 1064 4284 136 13 0 chrX 62861762 62862463 -103787833 + Lx LINE L1 5164 5874 -780 4 1064 375 23 0 0 chrX 62862463 62862507 -103787789 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1064 2605 112 25 0 chrX 62862507 62862625 -103787671 + Lx LINE L1 5875 5995 -659 4 1064 3848 43 8 0 chrX 62862625 62863095 -103787201 + L1Md_F3 LINE L1 6110 6583 -1 4 1064 3700 135 25 62 chrX 62863094 62863771 -103786525 + Lx LINE L1 5998 6649 -5 4 1064 4149 194 12 6 chrX 62863779 62864588 -103785708 + Lx2 LINE L1 6183 6996 -1 4 1064 16900 20 0 0 chrX 62865072 62867044 -103783252 + L1Md_F2 LINE L1 3615 5586 -297 4 1064 7858 53 8 0 chrX 62867044 62868031 -103782265 + L1Md_F2 LINE L1 5587 6581 -1 4 1064 4371 163 26 8 chrX 62868965 62869863 -103780433 - L1_Mur1 LINE L1 -844 5042 4240 4 1064 279 180 0 16 chrX 62869848 62869910 -103780386 - L1_Mur3 LINE L1 -3951 1929 1869 4 1064 4685 154 79 7 chrX 62870558 62871417 -103778879 + Lx2 LINE L1 6077 6997 0 4 1064 812 324 45 96 chrX 62871968 62872089 -103778207 - RMER15 LTR ERVL -55 520 402 4 1064 6103 131 15 4 chrX 62872089 62873067 -103777229 + Lx3A LINE L1 5993 6981 0 4 1064 812 324 45 96 chrX 62873067 62873113 -103777183 - RMER15 LTR ERVL -174 401 376 4 1064 1103 89 0 0 chrX 62873113 62873259 -103777037 - B1_Mus2 SINE Alu 0 147 2 4 1064 812 324 45 96 chrX 62873259 62873619 -103776677 - RMER15 LTR ERVL -200 375 20 4 1064 2035 164 75 83 chrX 62874348 62874401 -103775895 - L1_Mur2 LINE L1 -467 5410 5369 4 1064 1047 111 30 59 chrX 62874401 62874603 -103775693 - Lx LINE L1 -7 6647 6452 4 1064 2035 164 75 83 chrX 62874603 62875067 -103775229 - L1_Mur2 LINE L1 -509 5368 4897 4 1064 8064 142 19 4 chrX 62875065 62876347 -103773949 + Lx2A1 LINE L1 5707 7008 0 4 1064 22 0 0 0 chrX 62876364 62876386 -103773910 + AT_rich Low_complexity Low_complexity 1 22 0 4 1064 2113 251 55 12 chrX 62876398 62877198 -103773098 + Lx9 LINE L1 5169 6041 -1603 4 1064 1073 280 52 54 chrX 62877186 62877609 -103772687 + Lx9 LINE L1 7146 7567 -77 4 1064 446 175 167 116 chrX 62877716 62877949 -103772347 - RCHARR1 DNA MER1_type -83 891 647 4 1064 482 328 214 18 chrX 62877934 62878366 -103771930 - RCHARR1 DNA MER1_type -450 524 8 4 1064 272 292 61 84 chrX 62878413 62878452 -103771844 + MER58B DNA MER1_type 180 219 -122 4 1064 261 0 0 0 chrX 62878452 62878481 -103771815 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1064 272 292 61 84 chrX 62878481 62878572 -103771724 + MER58B DNA MER1_type 220 306 -35 4 1064 242 424 72 7 chrX 62878650 62878940 -103771356 - L2a LINE L2 -176 3250 2942 4 1064 716 163 38 20 chrX 62879024 62879184 -103771112 - RMER1C Other Other 0 1342 1197 4 1064 6947 78 15 8 chrX 62879312 62880799 -103769497 - L1Md_F2 LINE L1 -3 6579 5086 4 1064 1180 62 17 6 chrX 62880832 62881011 -103769285 + L1_Mus3 LINE L1 6450 6630 -8 4 1064 438 257 216 0 chrX 62881032 62881180 -103769116 + ORR1D1 LTR MaLR 195 374 0 4 1064 183 377 88 7 chrX 62881771 62881918 -103768378 - L2a LINE L2 -503 2916 2758 4 1064 201 167 0 27 chrX 62882318 62882355 -103767941 + CT-rich Low_complexity Low_complexity 3 38 0 4 1064 865 81 105 0 chrX 62882368 62882492 -103767804 - B1_Mus1 SINE Alu -10 138 2 4 1064 313 227 14 43 chrX 62883649 62883718 -103766578 - B3 SINE B2 -40 176 110 4 1064 464 70 11 0 chrX 62884299 62884376 -103765920 - L1Md_F2 LINE L1 -4 6578 6496 4 1064 546 113 0 0 chrX 62884644 62884741 -103765555 + (TC)n Simple_repeat Simple_repeat 2 98 0 4 1064 207 228 0 34 chrX 62884819 62884878 -103765418 + A-rich Low_complexity Low_complexity 3 59 0 4 1064 442 287 106 19 chrX 62884904 62885064 -103765232 - Lx7 LINE L1 -449 7247 7074 4 1064 1888 227 62 75 chrX 62885094 62885722 -103764574 + Lx9 LINE L1 7024 7643 -1 4 1064 194 322 66 11 chrX 62885840 62885931 -103764365 - L2a LINE L2 -56 3370 3275 5 1064 722 323 17 21 chrX 62887003 62887294 -103763002 + MER89 LTR ERV1 250 539 -20 5 1064 2338 104 3 0 chrX 62888407 62888733 -103761563 + ORR1A2 LTR MaLR 1 327 0 5 1064 329 189 8 109 chrX 62889113 62889232 -103761064 + Lx9 LINE L1 7532 7638 -6 5 1064 243 330 45 25 chrX 62890412 62890613 -103759683 + L1M3 LINE L1 5601 5806 -374 5 1064 235 49 24 24 chrX 62891110 62891152 -103759144 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 5 1064 1091 51 0 7 chrX 62891152 62891290 -103759006 - B1_Mm SINE Alu -9 138 2 5 1064 579 169 0 0 chrX 62891728 62891817 -103758479 - Lx4A LINE L1 -361 6697 6609 5 1064 296 83 21 0 chrX 62892211 62892259 -103758037 + (CAGA)n Simple_repeat Simple_repeat 4 52 0 5 1064 2287 68 119 3 chrX 62894039 62894366 -103755930 - L1_Mus2 LINE L1 0 6566 6202 5 1064 230 139 0 0 chrX 62894366 62894402 -103755894 + L1_Mus2 LINE L1 6084 6119 -447 5 1064 22 0 0 0 chrX 62894487 62894509 -103755787 + AT_rich Low_complexity Low_complexity 1 22 0 5 1064 1076 83 7 14 chrX 62895238 62895385 -103754911 - B1_Mus1 SINE Alu -1 147 2 5 1064 21 36 0 0 chrX 62895677 62895705 -103754591 + AT_rich Low_complexity Low_complexity 1 28 0 5 1064 370 295 0 69 chrX 62896384 62896515 -103753781 + MER92B LTR ERV1 122 243 -393 5 1064 748 305 23 38 chrX 62896561 62896850 -103753446 + MTE2a LTR MaLR 2 255 -124 5 1064 467 332 27 27 chrX 62896844 62897067 -103753229 + MER92B LTR ERV1 366 588 -48 5 1064 540 211 22 8 chrX 62897688 62897822 -103752474 - Lx6 LINE L1 -26 7434 7299 5 1064 225 0 0 0 chrX 62898961 62898986 -103751310 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1064 228 290 64 27 chrX 62899079 62899189 -103751107 + MLT1C LTR MaLR 180 293 -174 5 1064 241 119 0 0 chrX 62899213 62899255 -103751041 - L1_Mur3 LINE L1 -3123 2757 2716 5 1064 2001 279 171 24 chrX 62899256 62899996 -103750300 + Lx6 LINE L1 6183 7035 -425 5 1064 270 0 0 0 chrX 62899996 62900026 -103750270 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5 1064 2001 263 98 26 chrX 62900026 62900418 -103749878 + Lx6 LINE L1 7036 7451 -9 5 1064 2171 237 87 34 chrX 62900845 62901925 -103748371 + L1_Mus1 LINE L1 218 1154 -5484 5 1064 11151 104 11 4 chrX 62901913 62904370 -103745926 + L1_Mus1 LINE L1 4090 6565 -2 5 1064 234 239 0 0 chrX 62904844 62904915 -103745381 + GA-rich Low_complexity Low_complexity 2 72 0 5 1064 463 289 41 21 chrX 62905382 62905527 -103744769 - B4A SINE B4 -142 150 3 5 1064 412 273 65 13 chrX 62905626 62905792 -103744504 + MT2A LTR ERVL 244 502 -99 5 1064 2536 258 87 39 chrX 62905797 62906385 -103743911 - Lx7 LINE L1 -312 7384 6771 5 1064 1107 95 0 0 chrX 62906385 62906532 -103743764 - B1_Mus2 SINE Alu 0 147 1 5 1064 2536 258 87 39 chrX 62906532 62906798 -103743498 - Lx7 LINE L1 -926 6770 6489 5 1064 534 271 86 0 chrX 62906811 62906951 -103743345 - Lx7 LINE L1 -1266 6430 6279 5 1064 224 339 0 0 chrX 62907481 62907599 -103742697 + T-rich Low_complexity Low_complexity 1 118 0 5 1064 27 62 0 0 chrX 62907672 62907720 -103742576 + AT_rich Low_complexity Low_complexity 1 48 0 5 1064 1110 181 92 4 chrX 62908061 62908284 -103742012 + RLTR11B LTR ERVK 1 243 -210 5 1064 1456 163 61 0 chrX 62908284 62908548 -103741748 - RLTR22_Mur LTR ERVK 0 1848 1569 5 1064 4754 114 49 27 chrX 62908756 62909570 -103740726 - RLTR22_Mur LTR ERVK -1016 832 1 5 1064 1358 151 0 22 chrX 62909570 62909796 -103740500 + RLTR11B LTR ERVK 233 453 0 5 1064 491 75 18 53 chrX 62909884 62909997 -103740299 + (TTTTTG)n Simple_repeat Simple_repeat 6 114 0 5 1064 1102 82 0 7 chrX 62909997 62910144 -103740152 - B1_Mus2 SINE Alu 0 147 2 5 1064 190 194 32 0 chrX 62910472 62910534 -103739762 + CT-rich Low_complexity Low_complexity 1 64 0 5 1064 206 182 15 0 chrX 62910892 62910958 -103739338 + CT-rich Low_complexity Low_complexity 1 67 0 5 1064 393 136 0 0 chrX 62910959 62911025 -103739271 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 1064 335 274 72 33 chrX 62911760 62911941 -103738355 + L1MD LINE L1 2138 2325 -3821 5 1064 2806 199 47 62 chrX 62912219 62913524 -103736772 + L1_Mur2 LINE L1 915 2163 -1751 5 1064 3873 188 2 15 chrX 62913525 62913790 -103736506 + L1_Mur2 LINE L1 4420 4678 -1199 5 16 5636 132 37 35 chrX 62913790 62914747 -103735549 - RMER17B LTR ERVK 0 958 1 5 1065 3873 188 2 15 chrX 62914747 62915271 -103735025 + L1_Mur2 LINE L1 4679 5199 -678 5 1065 7126 122 7 8 chrX 62915264 62916482 -103733814 + Lx LINE L1 5436 6654 0 5 1065 488 304 7 28 chrX 62916747 62916889 -103733407 - B1F SINE Alu -4 145 7 5 1065 5613 126 8 18 chrX 62917738 62918619 -103731677 - Lx LINE L1 0 6654 5783 5 1065 784 64 0 9 chrX 62918619 62918729 -103731567 - BC1_Mm scRNA scRNA -43 109 1 5 1065 579 81 11 0 chrX 62918729 62918820 -103731476 - Lx LINE L1 -2170 5825 5725 5 1065 2744 34 14 11 chrX 62918832 62919186 -103731110 - L1Md_F3 LINE L1 0 6584 6230 5 1065 3973 160 22 3 chrX 62919186 62919882 -103730414 - L1Md_F LINE L1 -16 5867 5159 5 1065 348 24 0 0 chrX 62919882 62919923 -103730373 + (T)n Simple_repeat Simple_repeat 1 41 0 5 1065 223 196 22 0 chrX 62920048 62920094 -103730202 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 5 1065 1286 236 42 14 chrX 62920127 62920415 -103729881 - Lx6 LINE L1 -370 7090 6795 5 1065 24 0 0 0 chrX 62921139 62921163 -103729133 + AT_rich Low_complexity Low_complexity 1 24 0 5 1065 37854 31 0 0 chrX 62921299 62927338 -103722958 - L1Md_T LINE L1 -1 6584 449 5 1065 2680 202 0 0 chrX 62927339 62927855 -103722441 - L1Md_F LINE L1 -715 5168 4653 5 1065 515 216 16 0 chrX 62927849 62927974 -103722322 - Lx4B LINE L1 -376 6682 6556 5 1065 342 0 0 0 chrX 62927983 62928021 -103722275 + (TCC)n Simple_repeat Simple_repeat 2 39 0 5 1065 227 235 0 56 chrX 62928021 62928033 -103722263 - ID_B1 SINE B4 -77 147 137 5 1065 519 45 0 0 chrX 62928033 62928099 -103722197 + (TC)n Simple_repeat Simple_repeat 2 67 0 5 1065 363 123 0 0 chrX 62928099 62928156 -103722140 - B1_Mus1 SINE Alu -91 57 1 5 1065 249 219 0 120 chrX 62928156 62928183 -103722113 - B4A SINE B4 -152 140 68 5 1065 611 213 7 42 chrX 62928196 62928351 -103721945 + L1_Mur2 LINE L1 5426 5576 -307 5 1065 1615 226 14 27 chrX 62928377 62928746 -103721550 + Lx5 LINE L1 6130 6493 -557 5 1065 10270 178 150 15 chrX 62928797 62933319 -103716977 + L1Md_F LINE L1 590 5883 0 5 1065 12775 178 48 60 chrX 62931415 62935899 -103714397 - L1Md_F LINE L1 -1213 4670 244 5 1065 674 361 45 23 chrX 62935964 62936253 -103714043 - ORR1D2 LTR MaLR -42 317 9 5 1065 593 338 132 22 chrX 62936249 62936567 -103713729 - MTD LTR MaLR -43 376 24 5 1065 31 0 0 0 chrX 62937045 62937076 -103713220 + AT_rich Low_complexity Low_complexity 1 31 0 5 1065 332 161 25 0 chrX 62937743 62937824 -103712472 - Lx4A LINE L1 0 7058 6976 5 1065 882 174 0 0 chrX 62938541 62938708 -103711588 + (TA)n Simple_repeat Simple_repeat 1 167 0 5 1065 198 128 0 0 chrX 62938919 62938958 -103711338 + (A)n Simple_repeat Simple_repeat 1 39 0 5 1065 243 0 0 0 chrX 62940216 62940243 -103710053 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1065 279 0 0 0 chrX 62940243 62940273 -103710023 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 1065 5304 283 58 18 chrX 62941825 62943403 -103706893 - Lx6 LINE L1 -2 7458 5819 5 1065 437 311 52 74 chrX 62943422 62943651 -103706645 - L2 LINE L2 -1700 1719 1496 5 1065 630 315 11 5 chrX 62944240 62944425 -103705871 - B3A SINE B2 -12 186 1 5 1065 351 274 59 12 chrX 62945315 62945485 -103704811 - L1MB1 LINE L1 -228 5961 5784 5 1065 261 222 19 0 chrX 62945483 62945537 -103704759 + Lx5 LINE L1 6723 6777 -273 5 1065 269 231 54 11 chrX 62945648 62945740 -103704556 - L1MB1 LINE L1 -955 5357 5262 5 1065 631 309 19 9 chrX 62945855 62946067 -103704229 - B3 SINE B2 -2 214 1 5 1065 248 333 69 69 chrX 62946388 62946591 -103703705 - L2c LINE L2 -2 3385 3183 5 1065 9345 73 12 0 chrX 62946649 62947059 -103703237 + L1Md_F2 LINE L1 4312 4733 -1150 5 1065 409 17 17 17 chrX 62947059 62947118 -103703178 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 5 1065 9345 73 12 0 chrX 62947118 62947967 -103702329 + L1Md_F2 LINE L1 4734 5585 -298 5 1065 7502 63 4 25 chrX 62947968 62948982 -103701314 + L1Md_F2 LINE L1 5588 6580 -2 5 1065 1334 299 46 53 chrX 62949598 62950015 -103700281 - MTD LTR MaLR 0 419 6 5 1065 231 149 21 0 chrX 62950134 62950181 -103700115 + T-rich Low_complexity Low_complexity 6 53 0 5 1065 3902 64 0 16 chrX 62950807 62951473 -103698823 - L1Md_F2 LINE L1 -491 6091 5434 5 1065 3961 45 0 6 chrX 62951474 62951962 -103698334 + L1Md_F2 LINE L1 6098 6582 0 5 1065 1658 216 22 14 chrX 62952291 62952674 -103697622 + ORR1B2 LTR MaLR 1 378 0 5 1065 300 340 122 5 chrX 62952674 62952869 -103697427 + MLT1A1 LTR MaLR 134 394 -14 5 1065 372 353 131 12 chrX 62953592 62953836 -103696460 - B4A SINE B4 -18 274 2 5 1065 368 271 107 25 chrX 62953925 62954046 -103696250 + B3 SINE B2 5 135 -81 5 1065 746 192 7 27 chrX 62955430 62955580 -103694716 - B1_Mur4 SINE Alu -2 148 2 5 1065 255 175 0 0 chrX 62955636 62955693 -103694603 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1065 491 356 79 45 chrX 62955695 62955968 -103694328 - Lx8 LINE L1 -142 7331 7051 5 1065 189 0 0 0 chrX 62955968 62955989 -103694307 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 5 1065 491 356 79 45 chrX 62955989 62956094 -103694202 - Lx8 LINE L1 -423 7050 6942 5 1065 623 271 76 111 chrX 62956091 62956407 -103693889 + Lx8 LINE L1 6326 6630 -843 5 1065 22 35 0 0 chrX 62956759 62956788 -103693508 + AT_rich Low_complexity Low_complexity 1 29 0 5 1065 5046 32 0 0 chrX 62956815 62957406 -103692890 - L1Md_T LINE L1 -1 6581 5991 5 1065 27 29 0 0 chrX 62957881 62957915 -103692381 + AT_rich Low_complexity Low_complexity 1 34 0 5 1065 22 94 0 0 chrX 62958546 62958610 -103691686 + AT_rich Low_complexity Low_complexity 1 64 0 5 1065 252 188 0 0 chrX 62959100 62959164 -103691132 + GA-rich Low_complexity Low_complexity 1 64 0 5 1065 505 315 40 56 chrX 62959176 62959425 -103690871 + Lx8 LINE L1 7225 7469 -4 5 1065 412 291 19 84 chrX 62959458 62959612 -103690684 + RSINE1 SINE B4 21 164 -1 5 1065 1717 161 21 9 chrX 62959676 62960006 -103690290 + Lx3B LINE L1 5715 6028 -945 5 1065 543 31 0 0 chrX 62960006 62960071 -103690225 + (GA)n Simple_repeat Simple_repeat 2 66 0 5 1065 2961 21 0 0 chrX 62960100 62960437 -103689859 + IAPLTR1a_Mm LTR ERVK 1 337 0 5 1065 54882 22 20 7 chrX 62960437 62966826 -103683470 + IAPEz-int LTR ERVK 8 6481 0 5 1065 2961 21 0 0 chrX 62966826 62967163 -103683133 + IAPLTR1a_Mm LTR ERVK 1 337 0 5 1065 21 0 0 0 chrX 62967167 62967188 -103683108 + AT_rich Low_complexity Low_complexity 1 21 0 5 1065 24 0 0 0 chrX 62967686 62967710 -103682586 + AT_rich Low_complexity Low_complexity 1 24 0 5 1065 600 14 0 0 chrX 62968517 62968586 -103681710 + (TA)n Simple_repeat Simple_repeat 2 70 0 6 1065 203 125 0 40 chrX 62969444 62969494 -103680802 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 6 1065 228 220 24 35 chrX 62969529 62969614 -103680682 + Lx7 LINE L1 7585 7668 -28 6 1065 54 56 0 0 chrX 62969640 62969729 -103680567 + AT_rich Low_complexity Low_complexity 1 89 0 6 1065 23 0 0 0 chrX 62969784 62969807 -103680489 + AT_rich Low_complexity Low_complexity 1 23 0 6 1065 22 35 0 0 chrX 62969921 62969950 -103680346 + AT_rich Low_complexity Low_complexity 1 29 0 6 1065 685 0 24 0 chrX 62970747 62970832 -103679464 + (TAGA)n Simple_repeat Simple_repeat 3 89 0 6 1065 1057 333 71 18 chrX 62972238 62972742 -103677554 + Lx8 LINE L1 6941 7471 -2 6 1065 12405 180 23 26 chrX 62973776 62974358 -103675938 + L1_Mur2 LINE L1 1473 2061 -3816 6 1065 348 24 0 0 chrX 62974358 62974399 -103675897 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1065 12405 180 23 26 chrX 62974399 62976510 -103673786 + L1_Mur2 LINE L1 2062 4159 -1718 6 1065 1060 249 75 103 chrX 62976529 62977525 -103672771 - RMER17B LTR ERVK -64 894 1 6 1065 5938 188 126 6 chrX 62977525 62978904 -103671392 + L1_Mur2 LINE L1 4154 5697 -180 6 1065 786 170 0 0 chrX 62978909 62979056 -103671240 + GA-rich Low_complexity Low_complexity 2 148 0 6 1065 1053 124 0 0 chrX 62979056 62979273 -103671023 + (GGAA)n Simple_repeat Simple_repeat 1 217 0 6 1065 273 232 14 0 chrX 62979291 62979360 -103670936 + PB1D10 SINE Alu 48 117 0 6 1065 917 222 101 4 chrX 62979367 62979625 -103670671 + Lx9 LINE L1 7314 7596 -48 6 1065 339 267 125 35 chrX 62979639 62979897 -103670399 + L1M2 LINE L1 5091 5396 -747 6 1065 431 315 16 64 chrX 62979904 62980140 -103670156 + B4 SINE B4 1 219 -73 6 1065 583 305 94 7 chrX 62980431 62980718 -103669578 + L1M3 LINE L1 4811 5122 -1018 6 1065 727 207 0 16 chrX 62980770 62980952 -103669344 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 6 1065 198 0 0 0 chrX 62980950 62980972 -103669324 + (TA)n Simple_repeat Simple_repeat 1 22 0 6 1065 409 175 140 0 chrX 62981063 62981206 -103669090 + Lx9 LINE L1 7481 7643 -1 6 1065 281 232 67 31 chrX 62981215 62981360 -103668936 + L1MA9 LINE L1 6087 6239 -52 6 1065 514 266 13 25 chrX 62981489 62981647 -103668649 + Lx5 LINE L1 6503 6658 -392 6 1065 243 0 0 0 chrX 62981848 62981875 -103668421 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 6 1065 679 72 21 0 chrX 62981889 62981986 -103668310 - B1_Mus2 SINE Alu 0 147 49 6 1065 453 76 0 0 chrX 62983514 62983580 -103666716 + (GA)n Simple_repeat Simple_repeat 2 67 0 6 1065 2416 144 43 2 chrX 62983723 62984120 -103666176 - Lx2 LINE L1 -39 5844 5432 6 1065 6848 134 51 10 chrX 62984120 62985243 -103665053 + Lx2 LINE L1 5828 6996 -1 6 1065 270 278 30 44 chrX 62985441 62985644 -103664652 - Lx9 LINE L1 -33 7611 7412 6 1065 225 215 29 44 chrX 62985917 62985985 -103664311 + Lx4B LINE L1 6136 6202 -856 6 1065 1575 235 43 16 chrX 62985972 62986340 -103663956 + Lx5 LINE L1 6672 7042 -8 6 1065 247 347 40 40 chrX 62986401 62986551 -103663745 - RMER12 LTR ERVK -471 851 702 6 1065 419 161 73 48 chrX 62987166 62987290 -103663006 - Lx4B LINE L1 0 7058 6932 6 1065 3724 96 9 17 chrX 62987319 62987861 -103662435 + L1_Mus3 LINE L1 6098 6635 -3 6 1065 231 349 44 50 chrX 62989319 62989479 -103660817 + MLT1A0 LTR MaLR 1 159 -206 6 1065 295 319 8 72 chrX 62989481 62989606 -103660690 + PB1D10 SINE Alu 1 117 0 6 1065 233 288 17 0 chrX 62989845 62989904 -103660392 + RMER15 LTR ERVL 3 62 -513 6 1065 544 154 60 23 chrX 62989986 62990119 -103660177 + Lx9 LINE L1 7501 7638 -6 6 1065 186 43 0 0 chrX 62990178 62990201 -103660095 + (TAA)n Simple_repeat Simple_repeat 2 24 0 6 1065 559 293 73 0 chrX 62990330 62990494 -103659802 + RMER15 LTR ERVL 238 413 -162 6 1065 358 303 27 14 chrX 62990750 62990897 -103659399 + B4A SINE B4 2 150 -142 6 1065 183 188 0 0 chrX 62991353 62991401 -103658895 + CT-rich Low_complexity Low_complexity 1 48 0 6 1065 398 252 0 92 chrX 62991401 62991532 -103658764 - RLTR9A LTR ERVK 0 368 250 6 1065 7761 59 7 8 chrX 62991532 62992723 -103657573 - L1Md_F2 LINE L1 0 6582 5395 6 1065 390 232 163 44 chrX 62992831 62992966 -103657330 - RLTR9A LTR ERVK -217 151 1 6 1065 230 179 18 0 chrX 62992966 62993022 -103657274 + CT-rich Low_complexity Low_complexity 2 58 0 6 1065 643 275 180 9 chrX 62994017 62994234 -103656062 + Lx4B LINE L1 6732 7054 -4 6 1065 560 244 25 8 chrX 62994270 62994390 -103655906 + B3 SINE B2 93 214 -2 6 1065 281 263 0 0 chrX 62994463 62994520 -103655776 + ID SINE ID 4 60 -164 6 1065 1106 308 32 26 chrX 62994661 62995008 -103655288 - MTEa LTR MaLR -8 371 23 6 1065 234 291 152 37 chrX 62996428 62996592 -103653704 + MER34A LTR ERV1 384 566 -5 6 1065 2040 88 16 60 chrX 62997527 62997843 -103652453 - L1_Mus2 LINE L1 -1 6565 6264 6 1065 10348 130 4 9 chrX 62997843 62999592 -103650704 - MusHAL1 LINE L1 -299 2413 674 6 1065 355 118 0 0 chrX 62999592 62999643 -103650653 + IAPLTR1a_Mm LTR ERVK 1 51 -286 6 1065 625 47 16 158 chrX 62999643 62999770 -103650526 + IAPEz-int LTR ERVK 4 112 -6369 6 1065 231 321 0 0 chrX 62999770 62999826 -103650470 + RLTR27 LTR ERVK 220 275 -34 6 1065 1136 79 13 0 chrX 62999826 63000000 -103650296 + IAPEz-int LTR ERVK 168 327 -6154 6 1065 3437 63 6 19 chrX 63000000 63000476 -103649820 + IAPEz-int LTR ERVK 211 662 -5819 1 1065 2207 65 0 0 chrX 63000476 63000754 -103649542 + IAPEz-int LTR ERVK 1359 1636 -4845 1 1065 2684 31 0 27 chrX 63000753 63001087 -103649209 + IAPEz-int LTR ERVK 5736 6060 -421 1 1065 2038 146 72 36 chrX 63001087 63001542 -103648754 + IAPLTR2_Mm LTR ERVK 12 475 0 2 1065 4418 103 2 47 chrX 63001542 63002467 -103647829 - L1VL4 LINE L1 -2033 1526 669 3 1065 938 265 103 48 chrX 63002457 63002960 -103647336 - L1Md_F LINE L1 -5702 817 287 4 1065 232 352 32 21 chrX 63003197 63003290 -103647006 - MLT1C LTR MaLR -202 265 172 5 1065 297 0 0 0 chrX 63003435 63003468 -103646828 + (TA)n Simple_repeat Simple_repeat 1 33 0 6 1065 315 0 0 0 chrX 63003822 63003857 -103646439 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 7 1065 679 34 11 0 chrX 63004102 63004190 -103646106 + B1_Mus2 SINE Alu 57 145 -2 8 1065 23 33 0 0 chrX 63004602 63004632 -103645664 + AT_rich Low_complexity Low_complexity 1 30 0 9 1065 669 275 54 18 chrX 63005263 63005541 -103644755 + L1MB1 LINE L1 5731 6018 -171 1 1065 43 0 0 0 chrX 63005774 63005817 -103644479 + AT_rich Low_complexity Low_complexity 1 43 0 1 1065 254 270 0 22 chrX 63005912 63006003 -103644293 + (CATATA)n Simple_repeat Simple_repeat 2 90 0 1 1065 240 264 45 9 chrX 63006116 63006227 -103644069 + (TCTCTG)n Simple_repeat Simple_repeat 3 117 0 1 1065 3112 147 30 9 chrX 63006498 63007039 -103643257 - RLTR31_Mur LTR ERVK 0 553 2 1 1065 881 298 28 105 chrX 63007133 63007523 -103642773 + MTE2a LTR MaLR 2 361 -18 1 1065 1132 288 18 12 chrX 63007714 63008045 -103642251 + Lx8 LINE L1 6332 6664 -809 1 1065 230 200 18 0 chrX 63008102 63008157 -103642139 - L1_Mur3 LINE L1 -747 5133 5078 1 1065 632 186 124 0 chrX 63008192 63008321 -103641975 + B1_Mur3 SINE Alu 5 149 0 1 1065 1245 220 67 64 chrX 63008361 63008819 -103641477 + Lx9 LINE L1 5475 5968 -1676 1 1065 459 0 0 0 chrX 63010045 63010096 -103640200 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1065 348 289 88 16 chrX 63011109 63011359 -103638937 + L1MA7 LINE L1 6018 6285 -6 2 1065 31 0 0 0 chrX 63011360 63011391 -103638905 + AT_rich Low_complexity Low_complexity 1 31 0 2 1065 24 32 0 0 chrX 63012213 63012244 -103638052 + AT_rich Low_complexity Low_complexity 1 31 0 2 1065 366 331 49 14 chrX 63012244 63012388 -103637908 + MER67A LTR ERV1 326 474 -69 2 1065 545 313 104 0 chrX 63012384 63012566 -103637730 - MTD LTR MaLR -206 213 13 2 1065 184 0 97 0 chrX 63012577 63012608 -103637688 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 2 1065 420 130 0 0 chrX 63012856 63012925 -103637371 + (CATA)n Simple_repeat Simple_repeat 1 69 0 2 1065 410 317 94 48 chrX 63013601 63013932 -103636364 - Lx8 LINE L1 -18 7455 7110 2 1065 1050 107 0 0 chrX 63013965 63014105 -103636191 - B1_Mus1 SINE Alu -8 140 1 2 1065 360 353 7 0 chrX 63014106 63014256 -103636040 - Lx8 LINE L1 -353 7120 6970 2 1065 302 294 30 73 chrX 63014272 63014437 -103635859 - L1M5 LINE L1 -3301 2845 2688 3 1065 953 236 45 0 chrX 63015588 63015787 -103634509 + B3 SINE B2 3 210 -6 3 1065 1436 228 92 23 chrX 63015850 63016240 -103634056 - MTD LTR MaLR -2 417 1 3 1065 1431 253 84 6 chrX 63016295 63016653 -103633643 - MTD LTR MaLR -14 405 20 3 1065 350 317 0 0 chrX 63016851 63016933 -103633363 + RSINE1 SINE B4 3 84 -81 3 1065 1233 221 115 12 chrX 63016958 63017297 -103632999 + ORR1D1 LTR MaLR 1 374 0 3 1065 477 0 0 0 chrX 63017308 63017361 -103632935 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1065 1170 305 93 45 chrX 63020124 63020772 -103629524 - RMER1A Other Other -500 530 2 3 1065 604 298 84 71 chrX 63020739 63021148 -103629148 - RMER1B Other Other -561 505 12 3 1065 812 287 27 0 chrX 63021131 63021319 -103628977 - RMER1B Other Other -872 194 2 3 1065 591 224 0 30 chrX 63021621 63021764 -103628532 + B1_Mur4 SINE Alu 1 133 -15 3 1065 3255 103 0 4 chrX 63021764 63022214 -103628082 + L1_Mus2 LINE L1 6119 6566 0 4 1065 555 232 0 44 chrX 63022214 63022229 -103628067 + B1_Mus1 SINE Alu 134 148 0 3 1065 771 108 0 0 chrX 63022229 63022358 -103627938 + (GAAA)n Simple_repeat Simple_repeat 2 130 0 4 1065 378 0 0 0 chrX 63022582 63022624 -103627672 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1065 423 0 0 0 chrX 63022624 63022670 -103627626 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1065 360 263 77 19 chrX 63022749 63022904 -103627392 - MER33 DNA MER1_type -156 168 5 4 1065 25 65 0 0 chrX 63023930 63023976 -103626320 + AT_rich Low_complexity Low_complexity 1 46 0 4 1065 3286 174 84 28 chrX 63024202 63024518 -103625778 - RMER6D LTR ERVK -3 717 382 4 1065 366 123 0 0 chrX 63024518 63024575 -103625721 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 1065 3286 174 84 28 chrX 63024575 63024676 -103625620 - RMER6D LTR ERVK -339 381 259 4 1065 1792 36 18 0 chrX 63024676 63024897 -103625399 - L1Md_A LINE L1 0 6582 6358 4 1065 3286 174 84 28 chrX 63024897 63025157 -103625139 - RMER6D LTR ERVK -462 258 3 4 1065 257 282 51 13 chrX 63025452 63025531 -103624765 + ORR1E LTR MaLR 256 337 -22 4 1065 240 35 0 0 chrX 63025537 63025566 -103624730 + (TAGA)n Simple_repeat Simple_repeat 2 30 0 5 1065 1208 48 0 0 chrX 63025842 63025988 -103624308 + B1_Mm SINE Alu 1 146 -1 5 1065 4292 149 68 133 chrX 63026178 63027202 -103623094 + RMER17B LTR ERVK 1 958 0 5 1065 240 267 68 15 chrX 63027288 63027421 -103622875 + L1M4 LINE L1 5067 5206 -940 5 1065 462 114 0 0 chrX 63028192 63028280 -103622016 + (A)n Simple_repeat Simple_repeat 1 88 0 5 1065 5265 119 78 68 chrX 63028343 63029290 -103621006 - L1_Mus2 LINE L1 -2 6564 5608 5 1065 13519 112 8 5 chrX 63029280 63030188 -103620108 - MusHAL1 LINE L1 -551 2802 1894 5 1065 1136 72 24 0 chrX 63030188 63030355 -103619941 - L1_Mus1 LINE L1 0 6567 6397 5 1065 13519 113 8 6 chrX 63030355 63031651 -103618645 - MusHAL1 LINE L1 -1460 1893 595 5 1065 3095 167 83 146 chrX 63031651 63032614 -103617682 + RLTR13D6 LTR ERVK 1 902 0 5 1065 4054 148 7 37 chrX 63032614 63033325 -103616971 - L1VL1 LINE L1 -5523 899 210 5 1065 681 13 0 0 chrX 63033602 63033680 -103616616 + (TA)n Simple_repeat Simple_repeat 1 78 0 6 1065 581 370 80 4 chrX 63034082 63034332 -103615964 + ORR1D2 LTR MaLR 1 269 -101 6 1065 920 236 14 28 chrX 63034352 63034570 -103615726 - RLTR40 LTR ERVK -5 812 598 6 1065 419 203 106 68 chrX 63034712 63034787 -103615509 - RLTR40 LTR ERVK -218 599 518 6 1065 3482 18 2 0 chrX 63034787 63035182 -103615114 + MTA_Mm LTR MaLR 1 396 0 6 1065 9597 16 2 0 chrX 63035182 63036278 -103614018 + MTA_Mm-int LTR MaLR 1 1098 0 6 1065 3482 18 2 0 chrX 63036278 63036673 -103613623 + MTA_Mm LTR MaLR 1 396 0 6 1065 419 203 106 68 chrX 63036673 63036727 -103613569 - RLTR40 LTR ERVK -300 517 465 6 1065 5900 77 0 0 chrX 63036727 63037641 -103612655 + L1_Mus1 LINE L1 5431 6344 -223 6 1065 3353 52 2 35 chrX 63037641 63038101 -103612195 - LTRIS2 LTR ERV1 0 564 120 6 1065 394 71 0 0 chrX 63038095 63038151 -103612145 + B1_Mm SINE Alu 92 147 0 6 1065 1665 219 87 14 chrX 63038170 63038606 -103611690 - RLTR40 LTR ERVK -338 479 12 6 1065 590 303 50 5 chrX 63038678 63038877 -103611419 + B3 SINE B2 4 211 -5 6 1065 460 111 0 40 chrX 63039324 63039399 -103610897 - B1_Mus2 SINE Alu 0 147 76 6 1065 822 221 61 38 chrX 63039399 63039469 -103610827 - RLTR11A LTR ERVK 0 528 448 6 1065 189 0 0 0 chrX 63039469 63039490 -103610806 + (CA)n Simple_repeat Simple_repeat 2 22 0 7 1065 822 221 61 38 chrX 63039490 63039631 -103610665 - RLTR11A LTR ERVK -81 447 313 6 1065 303 338 70 0 chrX 63040131 63040273 -103610023 - L1MEe LINE L1 -3796 1058 907 7 1065 419 194 11 0 chrX 63040770 63040863 -103609433 + (CATA)n Simple_repeat Simple_repeat 3 96 0 7 1065 1832 197 41 43 chrX 63040863 63040921 -103609375 - Lx2B LINE L1 -21 6979 6919 7 1065 2280 108 9 0 chrX 63040921 63041245 -103609051 - ORR1A2 LTR MaLR 0 327 1 7 1065 1832 197 41 43 chrX 63041245 63041605 -103608691 - Lx2B LINE L1 -82 6918 6562 7 1065 13051 186 39 6 chrX 63041603 63042400 -103607896 - L1VL4 LINE L1 -1776 4110 3290 7 1065 2240 148 14 0 chrX 63042400 63042771 -103607525 - Lx2 LINE L1 0 6997 6622 7 1065 13051 182 31 10 chrX 63042771 63045250 -103605046 - L1VL4 LINE L1 -2597 3289 742 7 1065 249 200 0 0 chrX 63045336 63045386 -103604910 - L1VL4 LINE L1 -5843 791 742 7 133 485 260 126 0 chrX 63045589 63045716 -103604580 - B3 SINE B2 -71 145 3 7 1066 37 0 0 0 chrX 63045745 63045782 -103604514 + AT_rich Low_complexity Low_complexity 1 37 0 7 1066 418 277 27 0 chrX 63045903 63046015 -103604281 + B1_Mur1 SINE Alu 26 140 -9 7 1066 26 50 0 0 chrX 63046839 63046879 -103603417 + AT_rich Low_complexity Low_complexity 1 40 0 8 1066 25 0 0 0 chrX 63047290 63047315 -103602981 + AT_rich Low_complexity Low_complexity 1 25 0 8 1066 685 324 135 21 chrX 63047376 63047701 -103602595 + ORR1D2 LTR MaLR 9 370 0 8 1066 2983 279 97 61 chrX 63047701 63049022 -103601274 + ORR1D2-int LTR MaLR 1 1368 -2 8 1066 964 323 48 28 chrX 63049028 63049385 -103600911 + ORR1D2 LTR MaLR 5 368 -2 8 1066 23 0 0 0 chrX 63050179 63050202 -103600094 + AT_rich Low_complexity Low_complexity 1 23 0 8 1066 227 175 53 0 chrX 63050326 63050383 -103599913 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 8 1066 1542 341 40 8 chrX 63050404 63051062 -103599234 - Lx8 LINE L1 -158 7315 6637 8 1066 24 32 0 0 chrX 63051516 63051547 -103598749 + AT_rich Low_complexity Low_complexity 1 31 0 8 1066 1052 115 0 0 chrX 63053522 63053670 -103596626 + B1_Mus1 SINE Alu 1 148 0 8 1066 244 48 0 45 chrX 63053670 63053714 -103596582 + (CAAAA)n Simple_repeat Simple_repeat 1 42 0 8 1066 392 37 0 18 chrX 63053843 63053898 -103596398 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 8 1066 5539 134 55 46 chrX 63053934 63055712 -103594584 + Lx4A LINE L1 505 2297 -3580 9 1066 195 129 0 0 chrX 63055712 63055743 -103594553 + (TAA)n Simple_repeat Simple_repeat 1 31 0 9 1066 5407 110 8 0 chrX 63055765 63056529 -103593767 + L1_Mus4 LINE L1 5768 6537 -99 9 1066 3578 157 48 17 chrX 63056528 63057209 -103593087 + Lx4A LINE L1 4574 5279 -598 9 1066 1122 157 5 33 chrX 63057209 63057420 -103592876 + Lx LINE L1 6439 6643 -11 9 1066 3578 157 48 17 chrX 63057420 63057443 -103592853 + Lx4A LINE L1 5280 5300 -577 9 1066 3604 169 18 6 chrX 63057440 63058106 -103592190 - L1_Mm LINE L1 -794 5089 4416 9 1066 3967 132 2 2 chrX 63058107 63058704 -103591592 + Lx LINE L1 6057 6653 -1 9 1066 3303 145 34 0 chrX 63058704 63059435 -103590861 + Lx4A LINE L1 5288 6047 -1011 9 1066 242 326 91 70 chrX 63059559 63059889 -103590407 - Tigger13a DNA MER2_type -289 482 146 9 1066 2130 207 22 16 chrX 63060274 63060769 -103589527 + Lx6 LINE L1 4762 5259 -621 9 1066 3091 250 30 55 chrX 63060757 63061662 -103588634 + Lx6 LINE L1 5696 6568 -892 9 1066 522 0 0 0 chrX 63061676 63061734 -103588562 + (TA)n Simple_repeat Simple_repeat 1 58 0 9 1066 267 31 0 0 chrX 63061735 63061767 -103588529 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 1066 778 284 16 0 chrX 63061787 63061977 -103588319 + Lx6 LINE L1 6983 7175 -285 9 1066 4456 150 12 18 chrX 63061973 63062775 -103587521 + L1_Mur2 LINE L1 3997 4794 -1083 1 1066 719 273 64 18 chrX 63064331 63064551 -103585745 - ORR1D2 LTR MaLR -4 366 137 1 1066 4692 144 48 68 chrX 63064551 63065326 -103584970 + Lx LINE L1 413 1158 -5476 1 1066 297 0 0 0 chrX 63065326 63065359 -103584937 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1066 5548 182 20 136 chrX 63065359 63066272 -103584024 + Lx LINE L1 1159 2048 -3838 1 1066 1247 103 0 22 chrX 63066272 63066451 -103583845 + B2_Mm2 SINE B2 1 175 -20 1 1066 5548 182 20 136 chrX 63066451 63067181 -103583115 + Lx LINE L1 2049 2762 -3124 1 1066 1099 173 28 138 chrX 63067181 63067543 -103582753 - RLTRETN_Mm LTR ERVK 0 322 1 1 1066 573 214 50 7 chrX 63067543 63067684 -103582612 - MMETn-int LTR ERVK 0 4844 4698 1 1066 338 218 287 68 chrX 63067687 63067919 -103582377 - RLTR13B1 LTR ERVK -465 437 155 1 1066 6536 147 13 4 chrX 63067921 63068889 -103581407 - ETnERV2-int LTR ERVK -203 7203 6227 1 1066 5500 102 10 26 chrX 63068979 63069916 -103580380 - MMETn-int LTR ERVK -1687 3157 2356 1 1066 1129 28 0 0 chrX 63070321 63070503 -103579793 - L1Md_A LINE L1 0 6582 6441 1 1066 4083 207 72 95 chrX 63070504 63072065 -103578231 - ETnERV2-int LTR ERVK -3321 4085 2522 1 1066 38430 6 0 0 chrX 63072070 63077653 -103572643 + L1Md_A LINE L1 3 5586 -297 1 1066 9017 3 0 0 chrX 63077653 63078649 -103571647 + L1Md_A LINE L1 5587 6582 0 1 1066 3082 152 74 67 chrX 63078699 63079768 -103570528 - ETnERV2-int LTR ERVK -5321 2085 170 1 1066 1220 27 0 0 chrX 63079769 63079915 -103570381 + B1_Mm SINE Alu 2 147 0 1 1066 261 0 0 0 chrX 63079915 63079944 -103570352 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1066 907 182 26 47 chrX 63079947 63080137 -103570159 - ETnERV2-int LTR ERVK -4652 192 7 1 1066 1081 168 36 144 chrX 63080143 63080504 -103569792 - RLTRETN_Mm LTR ERVK 0 322 1 1 1066 15614 170 16 8 chrX 63080504 63084362 -103565934 + Lx LINE L1 2754 6647 -7 1 1066 468 141 63 13 chrX 63084794 63084952 -103565344 + (TCTG)n Simple_repeat Simple_repeat 2 167 0 1 1066 398 264 92 76 chrX 63084968 63085313 -103564983 + MLT2B4 LTR ERVL 76 491 -65 1 1066 245 278 103 0 chrX 63085782 63085879 -103564417 - L1MD LINE L1 -359 5883 5777 1 1066 267 269 188 29 chrX 63086096 63086234 -103564062 + RMER15 LTR ERVL 329 488 -87 1 1066 196 102 0 39 chrX 63088220 63088271 -103562025 + (TTTTG)n Simple_repeat Simple_repeat 1 49 0 1 1066 980 88 73 0 chrX 63088279 63088416 -103561880 - B1_Mus1 SINE Alu -1 147 1 1 1066 263 328 0 32 chrX 63090113 63090236 -103560060 + GA-rich Low_complexity Low_complexity 3 121 0 1 1066 295 308 19 43 chrX 63090312 63090612 -103559684 + GA-rich Low_complexity Low_complexity 1 292 0 1 1066 252 248 69 69 chrX 63090685 63090845 -103559451 - L1MD LINE L1 -487 5755 5596 1 1066 1374 72 0 0 chrX 63091005 63091180 -103559116 - L1Md_F2 LINE L1 -412 6170 5996 1 1066 3148 54 3 0 chrX 63091180 63091572 -103558724 + L1Md_F2 LINE L1 6178 6570 -12 1 1066 237 208 62 98 chrX 63092783 63092895 -103557401 - Lx9 LINE L1 -5 7639 7532 1 1066 25 0 0 0 chrX 63094260 63094285 -103556011 + AT_rich Low_complexity Low_complexity 1 25 0 1 1066 250 325 157 13 chrX 63094730 63094889 -103555407 + MER97c DNA MER1_type? 8 189 -901 1 1066 1961 91 14 1 chrX 63094916 63095200 -103555096 + L1_Mus2 LINE L1 5674 6007 -559 1 1066 593 322 110 16 chrX 63095200 63095509 -103554787 - ORR1D2 LTR MaLR -27 343 6 1 1066 185 311 0 0 chrX 63095631 63095692 -103554604 - MIR SINE MIR -30 232 172 1 1066 189 315 0 0 chrX 63095816 63095870 -103554426 - MIR SINE MIR -125 137 84 1 1066 3977 75 0 2 chrX 63095954 63096491 -103553805 - L1_Mm LINE L1 -1202 4681 4146 1 1066 3783 87 0 6 chrX 63096491 63097013 -103553283 + L1Md_F2 LINE L1 6049 6567 -15 1 1066 504 221 160 32 chrX 63098725 63098865 -103551431 - Lx7 LINE L1 0 7696 7544 1 1066 180 0 0 0 chrX 63098865 63098885 -103551411 + (TAA)n Simple_repeat Simple_repeat 1 20 0 1 1066 504 221 160 32 chrX 63098885 63098931 -103551365 - Lx7 LINE L1 -153 7543 7486 1 1066 218 57 56 19 chrX 63099198 63099252 -103551044 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 1 1066 1088 82 7 0 chrX 63099252 63099398 -103550898 - B1_Mus1 SINE Alu -1 147 1 1 1066 333 296 95 35 chrX 63099786 63100185 -103550111 + L1MC LINE L1 3974 4396 -1750 1 1066 232 345 24 0 chrX 63100701 63100785 -103549511 - MLT1E3 LTR MaLR -39 585 500 1 1066 418 296 8 8 chrX 63101235 63101361 -103548935 + RSINE1 SINE B4 4 129 -36 1 1066 423 0 0 0 chrX 63101398 63101445 -103548851 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1066 233 336 78 23 chrX 63101464 63101592 -103548704 + RMER5 LTR ERV1 79 213 -321 1 1066 205 159 0 43 chrX 63101787 63101833 -103548463 + A-rich Low_complexity Low_complexity 2 45 0 1 1066 1758 228 68 15 chrX 63101851 63102260 -103548036 - RMER5 LTR ERV1 -44 490 60 1 1066 26 0 0 0 chrX 63102269 63102295 -103548001 + AT_rich Low_complexity Low_complexity 1 26 0 1 1066 342 0 0 0 chrX 63102295 63102333 -103547963 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1066 254 27 27 0 chrX 63102359 63102385 -103547911 + (TTC)n Simple_repeat Simple_repeat 2 27 0 1 1066 465 34 0 0 chrX 63102385 63102444 -103547852 + (CTA)n Simple_repeat Simple_repeat 2 60 0 1 1066 254 27 27 0 chrX 63102444 63102454 -103547842 + (TTC)n Simple_repeat Simple_repeat 3 13 0 1 1066 383 269 21 0 chrX 63102460 63102553 -103547743 - B1_Mus2 SINE Alu -6 141 47 1 1066 287 304 37 0 chrX 63102672 63102807 -103547489 - L1M4 LINE L1 -5381 1161 1022 1 1066 338 229 114 69 chrX 63103060 63103191 -103547105 - MLT1B LTR MaLR -196 194 58 1 1066 351 0 0 0 chrX 63103234 63103273 -103547023 + (TAGA)n Simple_repeat Simple_repeat 1 39 0 1 1066 1356 69 0 16 chrX 63103716 63103908 -103546388 + L1Md_A LINE L1 6393 6581 -1 1 1066 216 0 0 0 chrX 63104308 63104332 -103545964 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1066 363 311 108 28 chrX 63104822 63105362 -103544934 + L1MC4a LINE L1 5848 6424 -1458 1 1066 289 247 52 58 chrX 63105383 63105555 -103544741 + L1MC4a LINE L1 6812 6982 -1013 1 1066 365 70 18 0 chrX 63105610 63105667 -103544629 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1066 494 0 33 0 chrX 63105667 63105727 -103544569 + (TAGA)n Simple_repeat Simple_repeat 2 64 0 1 1066 618 51 0 0 chrX 63105758 63105836 -103544460 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 1066 184 0 97 0 chrX 63106264 63106295 -103544001 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1066 824 241 237 17 chrX 63106297 63106533 -103543763 - ORR1D1 LTR MaLR -29 345 58 1 1066 516 136 0 0 chrX 63106526 63106607 -103543689 - ORR1D1-int LTR MaLR -543 1420 1340 1 1066 3114 175 11 11 chrX 63106595 63107151 -103543145 + ORR1A3-int LTR MaLR 1408 1963 0 1 1066 1590 147 61 67 chrX 63107151 63107479 -103542817 + ORR1A3 LTR MaLR 1 326 0 1 1066 235 331 50 22 chrX 63107710 63107849 -103542447 + RMER15 LTR ERVL 428 570 -5 1 1066 217 455 8 0 chrX 63107975 63108109 -103542187 + L2b LINE L2 3039 3173 -202 1 1066 21 0 0 0 chrX 63108826 63108847 -103541449 + AT_rich Low_complexity Low_complexity 1 21 0 1 1066 5230 193 66 11 chrX 63108847 63109970 -103540326 - Lx3C LINE L1 -2 6974 5790 1 1066 3888 94 2 2 chrX 63109973 63110506 -103539790 - L1_Mus2 LINE L1 -1 6565 6033 1 1066 5209 83 1 0 chrX 63110506 63111398 -103538898 + L1_Mus2 LINE L1 5153 6045 -521 1 1066 12869 162 33 15 chrX 63111394 63113919 -103536377 - L1_Mur1 LINE L1 -89 5797 3228 1 1066 1289 109 22 9 chrX 63113921 63114143 -103536153 + MusHAL1 LINE L1 1811 2035 -677 1 1066 1612 245 45 3 chrX 63114476 63114868 -103535428 - MTD LTR MaLR -20 399 7 1 1066 1420 297 38 140 chrX 63114872 63115352 -103534944 - MTD-int LTR MaLR -2 1256 654 1 1066 1756 173 46 3 chrX 63115352 63115676 -103534620 + RMER6C LTR ERVK 1 338 -352 1 1066 1420 297 38 140 chrX 63115676 63116001 -103534295 - MTD-int LTR MaLR -2 653 243 1 1066 3393 171 16 2 chrX 63116012 63116628 -103533668 - Lx3C LINE L1 -2 6974 6350 1 1066 4313 131 31 50 chrX 63116628 63117707 -103532589 + RLTR13D1 LTR ERVK 1 1023 0 1 1066 3724 178 32 0 chrX 63117707 63118398 -103531898 - Lx3C LINE L1 -621 6355 5643 1 1066 399 282 61 0 chrX 63118450 63118581 -103531715 - MTD-int LTR MaLR -1118 140 2 1 1066 1394 263 86 5 chrX 63118582 63118953 -103531343 - MTD LTR MaLR 0 419 19 1 1066 23 0 0 0 chrX 63120186 63120209 -103530087 + AT_rich Low_complexity Low_complexity 1 23 0 1 1066 22 0 0 0 chrX 63120260 63120282 -103530014 + AT_rich Low_complexity Low_complexity 1 22 0 1 1066 450 335 85 51 chrX 63120662 63121096 -103529200 - L1ME1 LINE L1 -35 6144 5696 1 1066 301 211 25 62 chrX 63121364 63121445 -103528851 - B3 SINE B2 -138 78 1 1 1066 436 333 59 29 chrX 63121447 63121719 -103528577 - L1ME1 LINE L1 -588 5574 5295 1 1066 3899 262 25 77 chrX 63121804 63123068 -103527228 + ORR1E-int LTR MaLR 179 1368 -2 1 1066 480 315 76 73 chrX 63123070 63123426 -103526870 + ORR1E LTR MaLR 1 357 -2 1 1066 227 258 16 0 chrX 63123430 63123492 -103526804 - L1_Rod LINE L1 -275 5572 5510 1 1066 300 53 0 0 chrX 63123503 63123541 -103526755 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1066 771 69 0 0 chrX 63123541 63123642 -103526654 + (GA)n Simple_repeat Simple_repeat 2 103 0 1 1066 3406 138 66 6 chrX 63123662 63124575 -103525721 + L1VL4 LINE L1 195 1177 -2438 1 1066 299 133 33 0 chrX 63124557 63124617 -103525679 + Lx3A LINE L1 6221 6282 -699 1 1066 270 226 0 0 chrX 63124644 63124697 -103525599 + ORR1B1 LTR MaLR 340 392 -2 1 1066 270 0 0 0 chrX 63124737 63124767 -103525529 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 1 1066 28 0 0 0 chrX 63124767 63124795 -103525501 + AT_rich Low_complexity Low_complexity 1 28 0 1 1066 11578 163 25 19 chrX 63124795 63126990 -103523306 + Lx2 LINE L1 3650 5857 -20 1 1066 243 0 0 0 chrX 63126990 63127017 -103523279 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1066 6514 123 30 11 chrX 63127017 63127081 -103523215 + Lx2 LINE L1 5864 5927 -1070 1 1066 4103 163 56 12 chrX 63127081 63127900 -103522396 - RLTR13A LTR ERVK 0 855 1 1 1066 6514 123 30 11 chrX 63127900 63128606 -103521690 + Lx2 LINE L1 5928 6648 -349 1 1066 773 150 15 0 chrX 63128592 63128725 -103521571 + Lx2 LINE L1 6765 6899 -98 1 1066 993 202 10 146 chrX 63128718 63128811 -103521485 - L1_Mur2 LINE L1 -2721 3156 3070 1 1066 294 29 0 0 chrX 63128811 63128846 -103521450 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1 1066 993 202 10 146 chrX 63128846 63129170 -103521126 - L1_Mur2 LINE L1 -2808 3069 2796 1 1066 685 78 0 0 chrX 63129165 63129255 -103521041 - Lx3C LINE L1 -702 6274 6185 1 1066 1949 129 21 21 chrX 63129252 63129591 -103520705 - L1_Mur1 LINE L1 -291 5595 5257 1 1066 26821 115 7 6 chrX 63129594 63131160 -103519136 - L1_Mus3 LINE L1 -88 6550 4993 1 1066 2321 4 0 0 chrX 63131160 63131419 -103518877 - L1Md_A LINE L1 0 6582 6324 1 1066 26821 156 21 29 chrX 63131419 63135933 -103514363 - L1_Mus3 LINE L1 -891 4992 511 1 1066 1058 263 8 9 chrX 63135993 63136224 -103514072 - ORR1B2 LTR MaLR -66 353 99 1 1066 308 35 16 49 chrX 63136224 63136285 -103514011 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 1 1066 867 319 74 19 chrX 63136285 63136363 -103513933 - ORR1B2 LTR MaLR -309 98 16 1 1066 1688 275 59 68 chrX 63136366 63136644 -103513652 - ORR1B2-int LTR MaLR -2 1256 995 1 1066 279 0 0 0 chrX 63136644 63136675 -103513621 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1066 4280 234 65 26 chrX 63136675 63138068 -103512228 - ORR1B2-int LTR MaLR -448 1061 2 1 1066 225 247 111 99 chrX 63138073 63138124 -103512172 - ORR1B2 LTR MaLR -8 359 315 1 1066 369 62 0 0 chrX 63138124 63138172 -103512124 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 1 1066 4061 179 37 7 chrX 63138172 63138947 -103511349 - Lx3C LINE L1 -15 6961 6163 1 1066 225 247 111 99 chrX 63138947 63138975 -103511321 - ORR1B2 LTR MaLR -53 314 279 1 1066 232 77 205 0 chrX 63138987 63139026 -103511270 + Lx3C LINE L1 5752 5798 -1178 1 1066 37087 21 2 7 chrX 63139025 63144068 -103506228 + L1Md_A LINE L1 577 5586 -297 1 1066 8202 42 0 4 chrX 63144068 63145068 -103505228 + L1Md_A LINE L1 5587 6582 0 1 1066 1934 173 22 0 chrX 63145068 63145433 -103504863 + Lx3C LINE L1 5784 6156 -820 1 1066 1546 200 12 70 chrX 63145433 63145777 -103504519 - ORR1B2 LTR MaLR -43 324 1 1 1066 30 27 0 0 chrX 63145870 63145907 -103504389 + AT_rich Low_complexity Low_complexity 1 37 0 2 1066 249 236 26 77 chrX 63146357 63146435 -103503861 + MTEb LTR MaLR 1 74 -305 2 1066 1081 74 0 0 chrX 63146490 63146625 -103503671 + B1_Mus1 SINE Alu 2 136 -12 2 1066 300 27 0 0 chrX 63146626 63146663 -103503633 + (TAA)n Simple_repeat Simple_repeat 2 38 0 2 1066 788 320 62 36 chrX 63146677 63146953 -103503343 + MTEb LTR MaLR 59 341 -38 2 1066 421 316 58 118 chrX 63147062 63147714 -103502582 - L1M4 LINE L1 -869 5277 4665 2 1066 388 263 9 0 chrX 63147729 63147843 -103502453 - L1MC LINE L1 -3648 2498 2384 2 1066 24 77 0 0 chrX 63148203 63148255 -103502041 + AT_rich Low_complexity Low_complexity 1 52 0 2 1066 21283 126 26 1 chrX 63148558 63151842 -103498454 - L1VL4 LINE L1 -1111 4772 1418 2 1066 239 0 32 0 chrX 63151842 63151873 -103498423 + (TTTG)n Simple_repeat Simple_repeat 3 34 0 2 1066 21283 174 35 86 chrX 63151873 63153021 -103497275 - L1VL4 LINE L1 -4466 1417 253 2 1066 1759 202 19 24 chrX 63153048 63153419 -103496877 - L1_Mur3 LINE L1 -85 5795 5427 2 1066 575 284 107 64 chrX 63153638 63153842 -103496454 - L1MA5A LINE L1 -465 5832 5608 2 1066 583 286 0 0 chrX 63153842 63153982 -103496314 - B1_Mur1 SINE Alu -7 142 3 2 1066 575 284 105 66 chrX 63153982 63154317 -103495979 - L1MA5A LINE L1 -693 5607 5257 2 1066 1406 166 137 45 chrX 63154609 63154916 -103495380 + RMER2 LTR ERV1 1 338 -229 2 1066 828 188 102 135 chrX 63154916 63155249 -103495047 - RLTRETN_Mm LTR ERVK 0 322 1 2 1066 954 259 46 4 chrX 63155249 63155297 -103494999 + RMER2 LTR ERV1 325 371 -196 2 1066 537 58 0 0 chrX 63155297 63155366 -103494930 + (CA)n Simple_repeat Simple_repeat 1 69 0 2 1066 954 259 46 4 chrX 63155366 63155550 -103494746 + RMER2 LTR ERV1 372 566 -1 2 1066 333 304 128 21 chrX 63155797 63155891 -103494405 - PB1D10 SINE Alu -5 122 19 2 1066 23 0 0 0 chrX 63155969 63155992 -103494304 + AT_rich Low_complexity Low_complexity 1 23 0 2 1066 328 215 8 16 chrX 63156122 63156245 -103494051 + CT-rich Low_complexity Low_complexity 3 124 0 2 1066 13304 74 4 16 chrX 63157148 63159704 -103490592 - L1Md_F2 LINE L1 -1 6581 4063 2 1066 1699 98 0 0 chrX 63159701 63159945 -103490351 + L1Md_F2 LINE L1 3849 4092 -1791 2 1066 21 36 0 0 chrX 63159947 63159975 -103490321 + AT_rich Low_complexity Low_complexity 1 28 0 2 1066 1169 201 17 5 chrX 63160089 63160381 -103489915 + Lx2B LINE L1 5741 6029 -952 2 1066 249 347 73 30 chrX 63160444 63160676 -103489620 + L1MC1 LINE L1 5386 5627 -706 2 1066 381 343 7 0 chrX 63160824 63160964 -103489332 + Lx8 LINE L1 6729 6869 -604 2 1066 785 264 50 50 chrX 63160968 63161255 -103489041 - RLTR15 LTR ERVK -16 343 55 2 1066 198 0 0 0 chrX 63161255 63161277 -103489019 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 1066 785 264 50 50 chrX 63161277 63161332 -103488964 - RLTR15 LTR ERVK -305 54 1 2 1066 952 249 181 24 chrX 63161374 63161711 -103488585 + Lx8 LINE L1 7076 7465 -8 2 1066 343 323 178 19 chrX 63161743 63162002 -103488294 + L1MC1 LINE L1 5767 6066 -267 2 1066 22 35 0 0 chrX 63162583 63162612 -103487684 + AT_rich Low_complexity Low_complexity 1 29 0 2 1066 26 0 0 0 chrX 63163404 63163430 -103486866 + AT_rich Low_complexity Low_complexity 1 26 0 2 1066 2950 77 31 0 chrX 63164539 63164927 -103485369 - MTB LTR MaLR 0 400 1 2 1066 2646 179 56 79 chrX 63165219 63165862 -103484434 - RLTR5_Mm LTR ERV1 0 628 1 2 1066 483 18 0 0 chrX 63166339 63166395 -103483901 + (TAG)n Simple_repeat Simple_repeat 1 56 0 2 1066 1074 154 22 88 chrX 63166395 63166623 -103483673 - Lx3C LINE L1 -7 6969 6757 2 1066 1494 175 9 1 chrX 63166622 63166884 -103483412 + Lx3C LINE L1 6554 6829 -221 2 1066 5960 140 41 3 chrX 63166878 63167940 -103482356 - L1_Mur1 LINE L1 -493 5393 4291 2 1066 18621 108 7 1 chrX 63167965 63171464 -103478832 - L1_Mus1 LINE L1 0 6567 3043 2 1066 3708 201 30 22 chrX 63171464 63172234 -103478062 - Lx2B LINE L1 0 7000 6225 2 1066 941 195 11 5 chrX 63172234 63172420 -103477876 + B2_Mm2 SINE B2 1 187 -8 2 1066 5120 140 16 0 chrX 63172421 63173294 -103477002 - L1_Mur1 LINE L1 -1600 4286 3400 2 1066 3776 126 2 5 chrX 63173292 63173916 -103476380 + L1_Mur1 LINE L1 2792 3413 -2473 2 1066 1894 175 41 20 chrX 63174002 63174437 -103475859 - L1_Mur3 LINE L1 -3144 2739 2291 2 1066 1170 291 125 14 chrX 63174685 63175181 -103475115 + L1M2 LINE L1 4314 4895 -1248 2 1066 495 0 0 0 chrX 63175181 63175236 -103475060 + (TAAA)n Simple_repeat Simple_repeat 4 58 0 2 1066 1170 291 125 14 chrX 63175236 63175641 -103474655 + L1M2 LINE L1 4896 5315 -828 2 1066 1490 106 80 0 chrX 63175627 63175853 -103474443 - L1_Mur1 LINE L1 -324 5562 5319 2 1066 5560 95 35 8 chrX 63175853 63176701 -103473595 + Lx3_Mus LINE L1 6139 7009 0 2 1067 260 200 0 0 chrX 63178054 63178114 -103472182 + L1M2 LINE L1 4754 4813 -1330 2 1067 407 279 7 21 chrX 63178117 63178260 -103472036 + L1MA6 LINE L1 6048 6188 -112 2 1067 252 184 120 27 chrX 63178411 63178511 -103471785 + ORR1B1 LTR MaLR 265 374 -4 2 1067 23 33 0 0 chrX 63179382 63179412 -103470884 + AT_rich Low_complexity Low_complexity 1 30 0 2 1067 752 322 100 63 chrX 63179717 63180276 -103470020 + RMER13A LTR ERVK 182 761 -99 2 1067 2472 118 60 5 chrX 63180973 63181373 -103468923 - Lx2 LINE L1 -162 6835 6414 2 1067 449 229 22 49 chrX 63183232 63183416 -103466880 + L1M3 LINE L1 2701 2879 -3261 2 1067 1375 299 53 11 chrX 63183513 63183721 -103466575 + Lx6 LINE L1 6947 7114 -346 2 1067 438 20 0 0 chrX 63183721 63183772 -103466524 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1067 1375 288 53 5 chrX 63183772 63183983 -103466313 + Lx6 LINE L1 7115 7341 -119 2 1067 774 311 46 0 chrX 63183976 63184217 -103466079 + Lx6 LINE L1 6603 6854 -606 2 1067 1133 207 0 0 chrX 63184321 63184529 -103465767 - URR1B DNA MER1_type -6 219 12 2 1067 7478 75 21 1 chrX 63184632 63185641 -103464655 - L1_Mus2 LINE L1 -1 6565 5561 2 1067 746 324 62 55 chrX 63186718 63187152 -103463144 + Lx8 LINE L1 7036 7472 -1 2 1067 495 0 0 0 chrX 63187294 63187349 -103462947 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 1067 199 395 0 38 chrX 63187349 63187500 -103462796 - L2 LINE L2 -768 2651 2506 2 1067 228 382 16 0 chrX 63188012 63188135 -103462161 - L2 LINE L2 -921 2498 2374 2 1067 228 67 0 0 chrX 63188148 63188178 -103462118 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1067 381 304 86 23 chrX 63188746 63188874 -103461422 + B4 SINE B4 5 140 -152 2 1067 2944 139 76 8 chrX 63188912 63189412 -103460884 + Lx LINE L1 6119 6652 -2 2 1067 2698 92 15 10 chrX 63191058 63191452 -103458844 + MTA_Mm LTR MaLR 1 396 0 2 1067 794 281 72 42 chrX 63191934 63192238 -103458058 - ORR1D2 LTR MaLR -48 311 1 2 1067 253 309 163 14 chrX 63192238 63192372 -103457924 + B4 SINE B4 138 292 0 2 1067 282 125 0 0 chrX 63192387 63192435 -103457861 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1067 225 0 0 0 chrX 63193162 63193187 -103457109 + (TA)n Simple_repeat Simple_repeat 1 25 0 2 1067 5169 162 14 1 chrX 63193440 63194343 -103455953 + L1_Mm LINE L1 4204 5118 -765 2 1067 20360 162 58 4 chrX 63194340 63200357 -103449939 + L1_Mus2 LINE L1 217 6565 -1 2 1067 6217 157 29 0 chrX 63200410 63201445 -103448851 + Lx LINE L1 5588 6652 -2 2 1067 3998 54 6 2 chrX 63201601 63202102 -103448194 + RLTR1C LTR ERV1 1 503 0 2 1067 2309 176 60 65 chrX 63202102 63202638 -103447658 + MMVL30-int LTR ERV1 1 533 -7023 2 1067 243 103 0 0 chrX 63202674 63202713 -103447583 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 2 1067 4902 99 3 18 chrX 63202994 63203701 -103446595 + MMVL30-int LTR ERV1 772 1467 -2231 2 1067 429 159 83 55 chrX 63203765 63204015 -103446281 + MMVL30-int LTR ERV1 960 1184 -2115 2 1067 5404 88 16 16 chrX 63204279 63205077 -103445219 + MMVL30-int LTR ERV1 1502 2629 -2434 2 1067 5248 188 76 57 chrX 63205126 63206680 -103443616 + MMVL30-int LTR ERV1 2875 5232 -2324 2 1067 4007 58 6 2 chrX 63206680 63207181 -103443115 + RLTR1C LTR ERV1 1 503 0 2 1067 333 0 0 0 chrX 63207578 63207615 -103442681 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2 1067 768 239 16 38 chrX 63208285 63208468 -103441828 + RMER15 LTR ERVL 1 179 -396 2 1067 977 102 0 14 chrX 63208817 63208956 -103441340 + B1_Mus1 SINE Alu 9 145 -3 2 1067 330 26 0 0 chrX 63208956 63208995 -103441301 + (TAA)n Simple_repeat Simple_repeat 2 40 0 2 1067 1924 67 0 0 chrX 63209127 63209381 -103440915 - L1_Mm LINE L1 -1683 4200 3947 2 1067 4499 53 2 2 chrX 63209382 63209947 -103440349 + L1Md_F2 LINE L1 6018 6582 0 2 1067 21 0 0 0 chrX 63209966 63209987 -103440309 + AT_rich Low_complexity Low_complexity 1 21 0 2 1067 376 296 69 21 chrX 63209993 63210138 -103440158 + MTE2a LTR MaLR 169 320 -59 2 1067 725 110 18 0 chrX 63210251 63210360 -103439936 - B1_Mus1 SINE Alu -1 147 37 2 1067 264 122 0 0 chrX 63210364 63210405 -103439891 + (A)n Simple_repeat Simple_repeat 1 41 0 2 1067 2362 182 50 47 chrX 63210555 63210869 -103439427 + RMER6C LTR ERVK 111 420 -270 2 1067 222 37 0 0 chrX 63210869 63210896 -103439400 + (AGCTG)n Simple_repeat Simple_repeat 1 27 0 2 1067 720 89 0 0 chrX 63210896 63210997 -103439299 + (CAGTT)n Simple_repeat Simple_repeat 2 102 0 2 1067 2362 182 50 47 chrX 63210997 63211257 -103439039 + RMER6C LTR ERVK 421 687 -3 2 1067 1934 229 37 9 chrX 63211259 63211691 -103438605 + RLTR28B LTR ERVL 34 477 -4 2 1067 21 36 0 0 chrX 63212077 63212105 -103438191 + AT_rich Low_complexity Low_complexity 1 28 0 2 1067 436 356 14 14 chrX 63212583 63212731 -103437565 - RSINE1 SINE B4 -12 153 6 2 1067 201 158 0 0 chrX 63212845 63212883 -103437413 + A-rich Low_complexity Low_complexity 1 38 0 2 1067 1386 154 12 0 chrX 63212954 63213200 -103437096 + L1_Mur1 LINE L1 3938 4186 -1700 2 1067 1369 141 44 0 chrX 63213204 63213431 -103436865 + Lx3B LINE L1 6733 6969 -4 2 1067 22 0 0 0 chrX 63213437 63213459 -103436837 + AT_rich Low_complexity Low_complexity 1 22 0 2 1067 666 172 9 0 chrX 63213983 63214099 -103436197 + B3 SINE B2 100 216 0 2 1067 245 205 24 49 chrX 63214183 63214265 -103436031 - L1MD3 LINE L1 -173 7822 7743 2 1067 38417 41 3 8 chrX 63214290 63220662 -103429634 - L1Md_T LINE L1 -11 6571 234 2 1067 238 294 107 43 chrX 63220752 63221079 -103429217 - L1MC4a LINE L1 -745 7137 6790 2 1067 1083 97 0 0 chrX 63221598 63221742 -103428554 + B1_Mus2 SINE Alu 2 145 -2 2 1067 303 304 39 39 chrX 63222344 63222474 -103427822 + L1MB7 LINE L1 5902 6031 -153 2 1067 227 159 0 0 chrX 63223272 63223316 -103426980 - Lx5 LINE L1 -1035 6015 5972 2 1067 2051 241 54 0 chrX 63223486 63223947 -103426349 + Lx5 LINE L1 6483 6968 -82 2 1067 1423 112 0 0 chrX 63223947 63224144 -103426152 + MTB LTR MaLR 204 400 0 2 1067 6477 107 13 100 chrX 63224144 63225195 -103425101 + MTB-int LTR MaLR 1 981 -117 2 1067 4626 46 0 3 chrX 63225195 63225764 -103424532 - L1Md_F2 LINE L1 -2 6580 6014 2 1067 6477 107 13 100 chrX 63225764 63225914 -103424382 + MTB-int LTR MaLR 982 1098 0 2 1067 2890 103 2 0 chrX 63225914 63226313 -103423983 + MTB LTR MaLR 1 400 0 2 1067 267 31 0 0 chrX 63226416 63226448 -103423848 + (TA)n Simple_repeat Simple_repeat 1 32 0 2 1067 22 0 0 0 chrX 63226614 63226636 -103423660 + AT_rich Low_complexity Low_complexity 1 22 0 2 1067 22 0 0 0 chrX 63227343 63227365 -103422931 + AT_rich Low_complexity Low_complexity 1 22 0 3 1067 36804 8 0 1 chrX 63228079 63234060 -103416236 + L1Md_A LINE L1 1 5586 -297 3 1067 9037 5 0 0 chrX 63234060 63235056 -103415240 + L1Md_A LINE L1 5587 6582 0 3 1067 255 272 16 21 chrX 63235738 63235815 -103414481 + MIR SINE MIR 50 124 -84 3 1067 7316 46 0 4 chrX 63235815 63236757 -103413539 - L1Md_F2 LINE L1 -3 6579 5642 3 1067 306 405 56 12 chrX 63236946 63237106 -103413190 + MER76 LTR ERVL 117 283 -408 3 1067 548 300 55 26 chrX 63238447 63238758 -103411538 - L1_Rod LINE L1 -3365 2482 2163 3 1067 207 0 0 0 chrX 63238778 63238801 -103411495 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1067 285 312 8 30 chrX 63238805 63238937 -103411359 - L1_Rod LINE L1 -6548 1060 932 3 1067 33602 48 0 4 chrX 63240463 63245887 -103404409 + L1Md_T LINE L1 86 5588 -298 3 1067 8434 29 0 11 chrX 63245888 63246895 -103403401 + L1Md_T LINE L1 5590 6585 0 3 1067 34803 33 2 7 chrX 63246906 63252086 -103398210 + L1Md_T LINE L1 440 5585 -298 3 1067 8306 41 0 0 chrX 63252087 63253083 -103397213 + L1Md_T LINE L1 5587 6582 0 3 1067 207 0 0 0 chrX 63254048 63254071 -103396225 + (TTGG)n Simple_repeat Simple_repeat 2 24 0 3 1067 186 43 0 0 chrX 63254072 63254095 -103396201 + (TGG)n Simple_repeat Simple_repeat 1 23 0 3 1067 396 0 0 0 chrX 63254095 63254139 -103396157 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1067 427 317 51 37 chrX 63254636 63254852 -103395444 - RMER15 LTR ERVL 0 575 357 3 1067 198 0 0 0 chrX 63255094 63255116 -103395180 + (TG)n Simple_repeat Simple_repeat 2 23 0 3 1067 297 135 0 103 chrX 63255172 63255230 -103395066 - ORR1B1 LTR MaLR -2 376 325 3 1067 7047 105 7 27 chrX 63255231 63256625 -103393671 - L1_Mus4 LINE L1 -6 6630 5248 3 1067 5027 139 10 1 chrX 63256619 63257488 -103392808 + L1_Mur2 LINE L1 3500 4376 -1501 3 1067 1715 210 32 3 chrX 63257488 63257832 -103392464 - ORR1B1 LTR MaLR -40 354 1 3 1067 198 103 0 0 chrX 63258986 63259015 -103391281 + (GGAGA)n Simple_repeat Simple_repeat 1 29 0 3 1067 581 27 13 0 chrX 63259015 63259090 -103391206 + (GA)n Simple_repeat Simple_repeat 1 76 0 3 1067 2795 136 24 26 chrX 63259279 63259302 -103390994 - Lx LINE L1 -1 6653 6626 3 1067 2018 94 10 10 chrX 63259302 63259604 -103390692 - L1_Mus3 LINE L1 0 6638 6337 3 1067 2795 136 24 26 chrX 63259604 63260079 -103390217 - Lx LINE L1 -29 6625 6157 3 1067 21 0 0 0 chrX 63260293 63260314 -103389982 + AT_rich Low_complexity Low_complexity 1 21 0 3 1067 2519 155 117 4 chrX 63260317 63260829 -103389467 - Lx4A LINE L1 -3 7055 6486 3 1067 1380 245 67 17 chrX 63260865 63261222 -103389074 - RLTR17 LTR ERVK -73 619 245 3 1067 8004 124 6 6 chrX 63261228 63262567 -103387729 + L1_Mm LINE L1 4090 5428 -455 3 1067 7362 164 21 25 chrX 63262572 63262747 -103387549 - L1_Mur2 LINE L1 -350 5527 5363 3 1067 471 35 0 0 chrX 63262747 63262804 -103387492 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1067 7362 164 21 25 chrX 63262804 63264132 -103386164 - L1_Mur2 LINE L1 -515 5362 4031 3 1067 3217 68 0 9 chrX 63264150 63264597 -103385699 - L1_Mm LINE L1 -897 4986 4544 3 1067 249 306 12 0 chrX 63264606 63264691 -103385605 + Lx6 LINE L1 7300 7385 -75 3 1067 374 359 85 40 chrX 63264728 63265056 -103385240 - MLT1F-int LTR MaLR -212 1277 935 3 1067 245 294 76 6 chrX 63265314 63265485 -103384811 - L1M3 LINE L1 -3349 2791 2609 3 1067 303 28 0 0 chrX 63265946 63265982 -103384314 + (TC)n Simple_repeat Simple_repeat 1 36 0 3 1067 245 120 40 0 chrX 63265994 63266044 -103384252 + (CAGA)n Simple_repeat Simple_repeat 3 54 0 3 1067 22 35 0 0 chrX 63266083 63266112 -103384184 + AT_rich Low_complexity Low_complexity 1 29 0 3 1067 300 360 35 18 chrX 63266444 63266557 -103383739 + PB1D7 SINE Alu 6 120 0 3 1067 204 40 0 0 chrX 63266950 63266975 -103383321 + (CAA)n Simple_repeat Simple_repeat 3 27 0 3 1067 3725 166 26 15 chrX 63266976 63267778 -103382518 + L1_Mur2 LINE L1 4636 5481 -692 3 1067 185 0 40 0 chrX 63267778 63267803 -103382493 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1067 368 176 32 32 chrX 63267812 63267906 -103382390 + Lx LINE L1 5904 5997 -657 3 1067 444 66 0 0 chrX 63267865 63267926 -103382370 - Lx LINE L1 -658 5996 5936 3 1067 2087 119 3 3 chrX 63267926 63268238 -103382058 + Lx LINE L1 6339 6650 -4 3 1067 26 30 0 0 chrX 63268310 63268343 -103381953 + AT_rich Low_complexity Low_complexity 1 33 0 3 1067 243 268 0 18 chrX 63269778 63269835 -103380461 + ID4 SINE ID 25 80 -3 3 1067 24 0 0 0 chrX 63270361 63270385 -103379911 + AT_rich Low_complexity Low_complexity 1 24 0 3 1067 582 261 140 5 chrX 63270818 63271011 -103379285 + MER58A DNA MER1_type 6 224 0 3 1067 6975 38 0 1 chrX 63271321 63272198 -103378098 - L1Md_F3 LINE L1 -16 6568 5693 3 1067 3323 95 60 54 chrX 63272193 63273088 -103377208 - L1Md_A LINE L1 -4322 1561 659 3 1067 423 291 13 51 chrX 63273090 63273114 -103377182 + ID_B1 SINE B4 66 215 -9 3 1067 738 192 0 15 chrX 63273114 63273246 -103377050 + B1_Mur1 SINE Alu 11 140 -9 3 1067 6069 79 6 1 chrX 63273464 63274315 -103375981 - L1_Mus2 LINE L1 -1 6565 5711 3 1067 542 71 12 0 chrX 63274548 63274632 -103375664 + (TA)n Simple_repeat Simple_repeat 2 86 0 3 1067 224 154 0 19 chrX 63274765 63274818 -103375478 + (TATG)n Simple_repeat Simple_repeat 3 54 0 3 1067 26 30 0 0 chrX 63274862 63274895 -103375401 + AT_rich Low_complexity Low_complexity 1 33 0 3 1067 228 321 36 0 chrX 63274902 63274958 -103375338 - ID4_ SINE ID -10 73 16 3 1067 678 276 0 24 chrX 63274993 63275160 -103375136 - RSINE1 SINE B4 0 165 3 3 1067 248 306 27 9 chrX 63275189 63275301 -103374995 - L1MC LINE L1 -2066 5816 5703 3 1067 329 211 213 43 chrX 63276049 63276191 -103374105 - L1ME2z LINE L1 -3 6441 6270 3 1067 411 21 0 0 chrX 63276191 63276239 -103374057 + (TC)n Simple_repeat Simple_repeat 1 48 0 3 1067 329 211 213 43 chrX 63276239 63276284 -103374012 - L1ME2z LINE L1 -175 6269 6223 3 1067 299 274 8 117 chrX 63276552 63276672 -103373624 - B1F SINE Alu -29 120 14 3 1067 402 21 0 0 chrX 63276686 63276733 -103373563 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1067 315 361 22 61 chrX 63277613 63277793 -103372503 - MLT1G1 LTR MaLR -30 549 377 3 1067 916 73 14 7 chrX 63277932 63278070 -103372226 + (TTCC)n Simple_repeat Simple_repeat 2 140 0 3 1067 429 323 56 93 chrX 63278267 63278482 -103371814 + B4A SINE B4 86 292 0 3 1067 1776 157 95 6 chrX 63279711 63280024 -103370272 + Lx3C LINE L1 6621 6963 -13 3 1067 387 0 0 0 chrX 63280024 63280067 -103370229 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 3 1067 1776 157 95 6 chrX 63280067 63280079 -103370217 + Lx3C LINE L1 6964 6975 -1 3 1067 219 167 0 0 chrX 63280227 63280269 -103370027 + CT-rich Low_complexity Low_complexity 2 43 0 3 1067 646 189 27 0 chrX 63280274 63280385 -103369911 - B1_Mur4 SINE Alu -8 142 29 3 1067 1094 84 0 0 chrX 63281072 63281214 -103369082 + B1_Mus1 SINE Alu 1 142 -6 3 1067 325 19 77 0 chrX 63281215 63281267 -103369029 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 3 1067 806 237 62 5 chrX 63281416 63281611 -103368685 - B3 SINE B2 -10 206 1 3 1067 529 310 0 0 chrX 63282349 63282465 -103367831 - PB1 SINE Alu -9 118 3 3 1067 504 257 124 16 chrX 63282465 63282631 -103367665 - MER2 DNA MER2_type -121 224 39 3 1067 293 0 27 0 chrX 63282964 63283001 -103367295 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1067 485 239 51 42 chrX 63283609 63283727 -103366569 + B1F SINE Alu 29 147 -2 3 1067 5502 109 1 7 chrX 63283902 63284779 -103365517 - YREP_Mm Unknown Unknown -822 990 119 3 1067 535 188 30 45 chrX 63285014 63285148 -103365148 - YREP_Mm Unknown Unknown -1680 132 1 3 1067 256 367 71 30 chrX 63285717 63285984 -103364312 + LTR16E1 LTR ERVL 203 480 -58 3 1067 510 228 114 0 chrX 63287395 63287518 -103362778 + B3 SINE B2 20 156 -60 3 1067 1014 274 121 11 chrX 63287530 63287857 -103362439 - L1MA6 LINE L1 -148 6152 5797 3 1067 360 103 0 0 chrX 63287857 63287915 -103362381 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 1067 1014 274 121 11 chrX 63287915 63288133 -103362163 - L1MA6 LINE L1 -504 5796 5547 3 1067 190 299 31 79 chrX 63288133 63288260 -103362036 - L3 LINE CR1 -738 3751 3631 3 1067 291 336 0 9 chrX 63288499 63288610 -103361686 - PB1D7 SINE Alu -6 114 5 3 1067 210 37 0 0 chrX 63288621 63288648 -103361648 + (TTG)n Simple_repeat Simple_repeat 2 28 0 3 1067 1047 276 62 47 chrX 63289333 63289671 -103360625 - MTE2b LTR MaLR -32 347 5 3 1067 306 0 0 0 chrX 63289768 63289802 -103360494 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 1067 234 366 109 18 chrX 63290254 63290474 -103359822 - L2 LINE L2 -697 2722 2483 3 1067 637 275 35 0 chrX 63290692 63290892 -103359404 + L1MA5 LINE L1 6080 6286 -14 3 1067 516 32 0 0 chrX 63290989 63291051 -103359245 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 1067 30574 98 7 42 chrX 63291635 63297206 -103353090 + L1Md_F2 LINE L1 212 5585 -298 3 1067 7248 72 21 4 chrX 63297207 63298177 -103352119 + L1Md_F2 LINE L1 5587 6572 -10 3 1067 21 0 0 0 chrX 63298179 63298200 -103352096 + AT_rich Low_complexity Low_complexity 1 21 0 3 1067 471 87 0 0 chrX 63298793 63298862 -103351434 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 1067 504 48 0 0 chrX 63298863 63298926 -103351370 + (TA)n Simple_repeat Simple_repeat 1 63 0 3 1067 240 238 138 37 chrX 63299015 63299124 -103351172 + L1MD LINE L1 5372 5491 -868 3 1067 2383 229 120 100 chrX 63299170 63299989 -103350307 + RMER13A LTR ERVK 14 848 -12 3 1067 239 182 36 0 chrX 63300109 63300164 -103350132 + L1MD LINE L1 5658 5714 -645 3 1067 454 351 30 0 chrX 63300222 63300353 -103349943 - RSINE1 SINE B4 0 165 31 3 1067 2277 246 66 72 chrX 63300613 63301215 -103349081 + RLTR40 LTR ERVK 5 616 -201 3 1067 360 0 0 0 chrX 63301215 63301255 -103349041 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1067 2277 246 66 72 chrX 63301255 63301457 -103348839 + RLTR40 LTR ERVK 617 804 -13 3 1067 638 370 42 0 chrX 63301745 63302034 -103348262 - L1M3e LINE L1 -6648 382 82 3 1067 537 16 0 0 chrX 63302110 63302172 -103348124 + (TCTA)n Simple_repeat Simple_repeat 3 64 0 3 1067 383 337 177 24 chrX 63302483 63303151 -103347145 + L1MC LINE L1 4244 5013 -1133 3 1067 395 229 55 37 chrX 63303534 63303643 -103346653 + ORR1D2 LTR MaLR 1 111 -259 3 1067 353 368 59 0 chrX 63303723 63303875 -103346421 + RSINE1 SINE B4 5 165 0 3 1067 4130 73 18 4 chrX 63303970 63304520 -103345776 + L1Md_F2 LINE L1 6013 6570 -12 4 1067 2499 170 139 25 chrX 63304669 63305236 -103345060 + Lx3A LINE L1 5789 6420 -589 4 1067 20643 117 18 5 chrX 63305235 63307329 -103342967 + L1_Mus2 LINE L1 2606 4733 -1150 4 1067 279 0 0 0 chrX 63307329 63307360 -103342936 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 133 20643 98 12 13 chrX 63307360 63309198 -103341098 + L1_Mus2 LINE L1 4734 6565 -1 4 1068 3375 129 33 12 chrX 63309210 63309789 -103340507 + Lx3A LINE L1 6391 6981 0 4 1068 279 0 0 0 chrX 63310200 63310231 -103340065 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 4 1068 1073 227 74 39 chrX 63310231 63310488 -103339808 - Lx5 LINE L1 -36 7014 6749 4 1068 1669 184 62 6 chrX 63310487 63310842 -103339454 + Lx5 LINE L1 5738 6112 -938 4 1068 459 118 0 0 chrX 63311471 63311539 -103338757 - Lx5 LINE L1 -1081 5969 5902 4 1068 534 373 25 32 chrX 63311856 63312172 -103338124 - MLT1A0 LTR MaLR -51 314 1 4 1068 366 286 9 9 chrX 63312402 63312515 -103337781 - PB1D10 SINE Alu 0 117 5 4 1068 697 281 114 0 chrX 63313715 63313882 -103336414 + B3 SINE B2 1 186 -30 4 1068 303 122 0 0 chrX 63313882 63313931 -103336365 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1068 539 257 173 0 chrX 63314019 63314198 -103336098 - B3 SINE B2 0 216 7 4 1068 5634 104 6 1 chrX 63314291 63315112 -103335184 - L1_Mm LINE L1 -1723 4160 3336 4 1068 3476 77 2 2 chrX 63315112 63315581 -103334715 + L1_Mus2 LINE L1 6098 6566 0 4 1068 369 0 0 0 chrX 63316398 63316439 -103333857 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1068 549 265 28 35 chrX 63316443 63316537 -103333759 - RLTR20A2 LTR ERVK -1 577 481 4 1068 492 68 0 0 chrX 63316537 63316610 -103333686 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 1068 549 265 28 35 chrX 63316610 63316656 -103333640 - RLTR20A2 LTR ERVK -98 480 438 4 1068 237 0 0 0 chrX 63316658 63316688 -103333608 + Lx LINE L1 5943 5972 -682 4 1068 983 76 7 58 chrX 63316688 63316763 -103333533 + B1_Mus1 SINE Alu 3 76 -72 4 1068 1983 142 46 90 chrX 63316763 63317173 -103333123 + RLTR9C LTR ERVK 1 392 -1 4 1068 983 76 7 58 chrX 63317173 63317251 -103333045 + B1_Mus1 SINE Alu 77 148 0 4 1068 211 28 27 27 chrX 63317251 63317288 -103333008 + (TAAAAA)n Simple_repeat Simple_repeat 5 41 0 4 1068 204 40 0 0 chrX 63317288 63317313 -103332983 + (GGA)n Simple_repeat Simple_repeat 3 27 0 4 1068 4526 98 5 27 chrX 63317313 63317977 -103332319 + L1_Mus4 LINE L1 5967 6615 -21 4 1068 198 0 0 0 chrX 63317984 63318006 -103332290 + (TA)n Simple_repeat Simple_repeat 2 23 0 4 1068 1403 108 17 0 chrX 63318069 63318309 -103331987 - MYSERV16_I-int LTR ERVK -1015 1311 1068 4 1068 4490 176 43 35 chrX 63318318 63319393 -103330903 - MYSERV16_I-int LTR ERVK -1490 1352 1 4 1068 348 281 22 0 chrX 63320222 63320311 -103329985 - RLTR20C LTR ERVK 0 541 451 4 1068 450 0 0 0 chrX 63320312 63320362 -103329934 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1068 390 57 28 14 chrX 63320377 63320448 -103329848 + (TTTTTG)n Simple_repeat Simple_repeat 2 73 0 4 1068 872 237 103 75 chrX 63320462 63320781 -103329515 - RLTR20C LTR ERVK -122 412 85 4 1068 349 197 40 0 chrX 63320832 63320908 -103329388 - RLTR20C LTR ERVK -425 109 31 4 1068 435 19 0 0 chrX 63320939 63320991 -103329305 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1068 522 83 0 0 chrX 63320991 63321062 -103329234 + (TA)n Simple_repeat Simple_repeat 1 72 0 4 1068 8029 38 3 2 chrX 63321089 63322193 -103328103 + L1Md_F2 LINE L1 5445 6549 -33 4 1068 6905 32 0 0 chrX 63322193 63323005 -103327291 + L1Md_T LINE L1 5771 6582 0 4 1068 237 246 0 0 chrX 63323157 63323218 -103327078 + A-rich Low_complexity Low_complexity 1 61 0 4 1068 522 267 112 82 chrX 63323229 63323694 -103326602 + L1MA6 LINE L1 5295 5773 -518 4 1068 183 42 0 0 chrX 63323697 63323721 -103326575 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1068 316 341 18 18 chrX 63323732 63323956 -103326340 + L1MA6 LINE L1 5906 6129 -171 4 1068 22 0 0 0 chrX 63324141 63324163 -103326133 + AT_rich Low_complexity Low_complexity 1 22 0 4 1068 225 0 0 0 chrX 63324297 63324322 -103325974 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 4 1068 335 191 48 0 chrX 63324521 63324584 -103325712 - MIR SINE MIR -18 244 179 4 1068 2356 242 62 77 chrX 63325128 63325924 -103324372 - Lx7 LINE L1 -45 7651 6868 4 1068 6791 194 58 38 chrX 63325931 63326837 -103323459 - L1_Mur3 LINE L1 -17 5863 4946 4 1068 279 0 0 0 chrX 63326837 63326868 -103323428 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1068 6791 194 58 38 chrX 63326868 63327663 -103322633 - L1_Mur3 LINE L1 -935 4945 4129 4 1068 1113 241 40 25 chrX 63327661 63327938 -103322358 - L1_Mur3 LINE L1 -7384 344 64 4 1068 3244 124 34 9 chrX 63328558 63329087 -103321209 + Lx LINE L1 6113 6654 0 4 1068 322 319 11 11 chrX 63329204 63329299 -103320997 + B4 SINE B4 3 97 -195 4 1068 252 86 0 0 chrX 63329351 63329386 -103320910 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1068 309 351 68 61 chrX 63329550 63329990 -103320306 - MARNA DNA Mariner -8 578 136 4 1068 1022 82 41 0 chrX 63330457 63330604 -103319692 - B2_Mm2 SINE B2 -6 189 37 4 1068 37005 5 0 0 chrX 63330658 63336219 -103314077 + L1Md_A LINE L1 25 5586 -297 4 1068 9006 3 0 0 chrX 63336219 63337215 -103313081 + L1Md_A LINE L1 5587 6582 0 4 1068 250 244 146 0 chrX 63337541 63337623 -103312673 + L1MA6 LINE L1 5867 5960 -340 4 1068 995 221 50 123 chrX 63337982 63338420 -103311876 - Lx7 LINE L1 0 7696 7291 4 1068 289 58 19 19 chrX 63338420 63338473 -103311823 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 4 1068 281 232 14 28 chrX 63338596 63338667 -103311629 - Lx7 LINE L1 -471 7225 7156 4 1068 22 56 0 0 chrX 63338672 63338708 -103311588 + AT_rich Low_complexity Low_complexity 1 36 0 4 1068 22 0 0 0 chrX 63338794 63338816 -103311480 + AT_rich Low_complexity Low_complexity 1 22 0 4 1068 317 296 20 0 chrX 63338850 63338948 -103311348 + Lx6 LINE L1 6264 6363 -687 4 1068 1590 286 45 48 chrX 63338944 63339556 -103310740 + Lx6 LINE L1 6478 7460 0 4 1068 36 23 0 0 chrX 63339692 63339735 -103310561 + AT_rich Low_complexity Low_complexity 1 43 0 4 1068 460 51 17 0 chrX 63339906 63339965 -103310331 - L1_Mus2 LINE L1 -399 6167 6108 4 1068 979 90 71 0 chrX 63339965 63340120 -103310176 + L1_Mus2 LINE L1 6401 6566 0 4 1068 1702 159 104 6 chrX 63340442 63340777 -103309519 - RLTR9A LTR ERVK 0 368 1 4 1068 1273 283 123 28 chrX 63341301 63341952 -103308344 - L1MA6 LINE L1 -115 7145 6433 4 1068 270 0 0 0 chrX 63341975 63342005 -103308291 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1068 448 348 0 28 chrX 63342082 63342366 -103307930 - L1MA6 LINE L1 -791 6312 6037 4 1068 748 296 36 42 chrX 63342383 63342714 -103307582 + RodERV21-int LTR ERV1 2440 2768 -2223 4 1068 282 29 0 0 chrX 63342761 63342796 -103307500 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 4 1068 536 346 40 28 chrX 63342815 63343312 -103306984 + RodERV21-int LTR ERV1 3586 4088 -3003 4 1068 252 0 0 0 chrX 63343703 63343731 -103306565 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1068 315 302 46 47 chrX 63344428 63344734 -103305562 + RodERV21-int LTR ERV1 3170 3369 -1948 4 1068 4384 317 44 48 chrX 63344876 63346960 -103303336 + RodERV21-int LTR ERV1 2718 4793 -198 4 1068 272 336 60 22 chrX 63347016 63347150 -103303146 + RMER4B LTR ERVK 347 485 -100 4 1068 424 335 71 31 chrX 63347679 63347904 -103302392 - L1MA6 LINE L1 -6790 240 7 4 1068 681 291 23 60 chrX 63347943 63348159 -103302137 + B3 SINE B2 4 211 -5 4 1068 21 0 0 0 chrX 63349158 63349179 -103301117 + AT_rich Low_complexity Low_complexity 1 21 0 4 1068 509 309 60 56 chrX 63349486 63349702 -103300594 - RMER12 LTR ERVK -5 1317 1101 4 1068 5318 105 5 17 chrX 63349885 63349924 -103300372 - RLTR22_Mur LTR ERVK -1043 805 776 4 1068 1417 41 56 5 chrX 63349924 63350119 -103300177 - L1_Mus1 LINE L1 -2 6565 6361 4 1068 5318 105 5 17 chrX 63350119 63350894 -103299402 - RLTR22_Mur LTR ERVK -1073 775 1 4 1068 362 261 21 32 chrX 63351848 63351943 -103298353 - PB1D10 SINE Alu -5 112 19 4 1068 1122 57 7 0 chrX 63352250 63352390 -103297906 + B1_Mm SINE Alu 1 141 -6 4 1068 195 42 0 0 chrX 63352392 63352416 -103297880 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 1068 2607 35 6 0 chrX 63352462 63352779 -103297517 - L1Md_T LINE L1 -1 6581 6263 4 1068 7701 149 83 6 chrX 63352858 63355249 -103295047 - Lx LINE L1 -1 6653 4056 4 1068 206 105 26 0 chrX 63355876 63355914 -103294382 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 4 1068 25 31 0 0 chrX 63356100 63356132 -103294164 + AT_rich Low_complexity Low_complexity 1 32 0 4 1068 501 188 0 0 chrX 63356678 63356822 -103293474 + (CA)n Simple_repeat Simple_repeat 1 144 0 4 1068 413 298 51 76 chrX 63357457 63357773 -103292523 - L1MC4 LINE L1 -1 8041 7734 4 1068 244 400 11 0 chrX 63357963 63358053 -103292243 + PB1D10 SINE Alu 2 92 -25 4 1068 344 319 188 38 chrX 63358132 63358451 -103291845 - L1MC4 LINE L1 -318 7564 7198 4 1068 221 83 28 0 chrX 63358830 63358866 -103291430 + (TCCC)n Simple_repeat Simple_repeat 2 38 0 4 1068 284 187 112 71 chrX 63358931 63359029 -103291267 + ORR1D1 LTR MaLR 273 374 0 4 1068 1638 287 50 33 chrX 63359029 63359666 -103290630 - Lx8 LINE L1 -514 6959 6312 4 1068 227 306 27 36 chrX 63359706 63359818 -103290478 - L1M5 LINE L1 -397 5767 5657 4 1068 545 237 57 36 chrX 63360118 63360258 -103290038 + B1F SINE Alu 1 143 -6 4 1068 1081 315 29 3 chrX 63360330 63360636 -103289660 + ORR1D2 LTR MaLR 55 368 -2 4 1068 250 328 0 0 chrX 63360639 63360703 -103289593 + ORR1D2-int LTR MaLR 2 65 -1305 4 1068 325 279 0 0 chrX 63360671 63360750 -103289546 + ORR1D2 LTR MaLR 290 368 -2 4 1068 618 272 66 19 chrX 63360857 63361116 -103289180 + L1MB1 LINE L1 5897 6167 -1 4 1068 22 0 0 0 chrX 63361234 63361256 -103289040 + AT_rich Low_complexity Low_complexity 1 22 0 4 1068 257 301 73 22 chrX 63362524 63362660 -103287636 + L1ME1 LINE L1 6010 6152 -27 4 1068 653 258 156 0 chrX 63362841 63363027 -103287269 + B3 SINE B2 2 216 0 4 1068 341 262 103 0 chrX 63363420 63363546 -103286750 + MIR SINE MIR 99 237 -25 4 1068 1880 205 55 0 chrX 63363557 63363903 -103286393 + MTC LTR MaLR 3 367 -54 4 1068 183 80 0 0 chrX 63363941 63363966 -103286330 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1068 362 312 62 0 chrX 63363966 63364078 -103286218 + B1_Mur2 SINE Alu 24 142 -7 4 1068 1061 75 0 0 chrX 63364083 63364230 -103286066 + L1_Mur1 LINE L1 2208 2354 -3532 4 1068 13275 108 19 17 chrX 63364226 63364300 -103285996 - L1_Mur1 LINE L1 -2550 3336 3270 4 1068 2619 34 9 39 chrX 63364300 63364637 -103285659 + IAPLTR2b LTR ERVK 1 327 0 4 1068 13275 118 57 15 chrX 63364637 63367283 -103283013 - L1_Mur1 LINE L1 -2617 3269 209 4 1068 236 30 30 0 chrX 63367338 63367371 -103282925 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 4 1068 965 288 62 57 chrX 63368194 63368562 -103281734 - ORR1D2 LTR MaLR 0 370 1 4 1068 241 234 0 31 chrX 63368573 63368670 -103281626 + GA-rich Low_complexity Low_complexity 4 97 0 4 1068 1573 243 67 63 chrX 63369496 63369592 -103280704 - RLTR20A LTR ERVK 0 541 451 5 1068 396 0 0 0 chrX 63369592 63369636 -103280660 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1068 1573 243 67 63 chrX 63369636 63370076 -103280220 - RLTR20A LTR ERVK -91 450 4 5 1068 342 0 0 0 chrX 63370084 63370122 -103280174 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 5 1068 5153 169 21 6 chrX 63370125 63371116 -103279180 + L1_Mur2 LINE L1 4495 5500 -377 5 1068 472 311 74 64 chrX 63371152 63371355 -103278941 - MTE2a LTR MaLR -1 378 174 5 1068 1220 270 31 80 chrX 63371386 63371776 -103278520 + ORR1D1 LTR MaLR 1 371 -3 5 1068 313 329 12 0 chrX 63371780 63371862 -103278434 - MTE2a LTR MaLR -232 147 65 5 1068 213 205 0 0 chrX 63371939 63371978 -103278318 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1068 455 335 46 20 chrX 63371978 63372203 -103278093 - MLT1D LTR MaLR -396 231 7 5 1068 1041 109 0 0 chrX 63372571 63372718 -103277578 + B1_Mus2 SINE Alu 1 147 0 5 1068 205 189 0 0 chrX 63373788 63373825 -103276471 + CT-rich Low_complexity Low_complexity 1 37 0 5 1068 653 55 18 35 chrX 63374981 63375094 -103275202 + (TTTC)n Simple_repeat Simple_repeat 2 112 0 5 1068 514 245 9 0 chrX 63376190 63376296 -103274000 - B4A SINE B4 -19 273 167 5 1068 33218 97 11 15 chrX 63376338 63382603 -103267693 - L1Md_F2 LINE L1 -13 6569 331 5 1068 246 170 0 60 chrX 63382613 63382663 -103267633 - B4 SINE B4 -208 84 38 5 1068 28582 126 6 4 chrX 63382671 63386110 -103264186 - L1_Mus3 LINE L1 0 6638 3179 5 1068 257 0 19 77 chrX 63386110 63386162 -103264134 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 5 1068 28582 135 4 11 chrX 63386162 63388960 -103261336 - L1_Mus3 LINE L1 -2705 3178 410 5 1068 296 368 26 67 chrX 63389573 63389738 -103260558 + MER74A LTR ERVL 222 382 -176 5 1068 1305 201 74 63 chrX 63389738 63390116 -103260180 + ORR1C2 LTR MaLR 1 382 -2 5 1068 296 368 26 67 chrX 63390116 63390145 -103260151 + MER74A LTR ERVL 383 408 -150 5 1068 285 171 0 0 chrX 63390226 63390260 -103260036 + A-rich Low_complexity Low_complexity 1 34 0 5 1068 1040 88 0 20 chrX 63390260 63390411 -103259885 + B1_Mus1 SINE Alu 1 148 0 5 1068 285 171 0 0 chrX 63390411 63390452 -103259844 + A-rich Low_complexity Low_complexity 35 75 0 5 1068 207 146 0 0 chrX 63390879 63390920 -103259376 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1068 191 338 105 52 chrX 63391465 63391618 -103258678 + L2 LINE L2 2563 2723 -696 5 1068 3608 137 27 22 chrX 63391779 63392354 -103257942 + Lx3A LINE L1 6383 6965 -16 5 1068 297 0 0 0 chrX 63392354 63392387 -103257909 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 5 1068 3608 137 27 22 chrX 63392387 63392407 -103257889 + Lx3A LINE L1 6966 6981 0 5 1068 6532 33 0 14 chrX 63392475 63393269 -103257027 - L1Md_F2 LINE L1 0 6582 5800 5 1068 3828 11 0 0 chrX 63393270 63393703 -103256593 - L1Md_A LINE L1 0 6582 6150 5 1068 28163 19 93 9 chrX 63393703 63398699 -103251597 - L1Md_A LINE L1 -673 5210 1 5 1068 2001 13 0 0 chrX 63398699 63398925 -103251371 - L1Md_F2 LINE L1 -770 5812 5587 5 1068 227 167 0 0 chrX 63398947 63398989 -103251307 + Lx2 LINE L1 6607 6648 -349 5 1068 727 197 7 0 chrX 63398973 63399120 -103251176 + Lx2 LINE L1 6763 6910 -87 5 1068 6203 118 16 8 chrX 63399120 63400084 -103250212 + Lx3_Mus LINE L1 6034 7004 -5 5 1068 25 0 0 0 chrX 63400084 63400109 -103250187 + AT_rich Low_complexity Low_complexity 1 25 0 5 1068 23 33 0 0 chrX 63401383 63401413 -103248883 + AT_rich Low_complexity Low_complexity 1 30 0 5 1068 225 154 19 19 chrX 63401542 63401595 -103248701 + A-rich Low_complexity Low_complexity 1 53 0 5 1068 464 72 0 14 chrX 63401647 63401717 -103248579 + (TA)n Simple_repeat Simple_repeat 1 69 0 5 1068 226 141 14 27 chrX 63401752 63401825 -103248471 + T-rich Low_complexity Low_complexity 3 74 0 5 1068 1033 84 21 0 chrX 63401826 63401969 -103248327 - B1_Mus2 SINE Alu 0 147 2 5 1068 754 277 87 52 chrX 63402967 63403348 -103246948 - Lx7 LINE L1 -16 7680 7287 5 1068 371 245 113 0 chrX 63403370 63403476 -103246820 + Lx7 LINE L1 7145 7262 -434 5 1068 28 0 0 0 chrX 63403849 63403877 -103246419 + AT_rich Low_complexity Low_complexity 1 28 0 5 1068 238 299 0 0 chrX 63405303 63405370 -103244926 + (TA)n Simple_repeat Simple_repeat 1 67 0 5 1068 258 337 0 21 chrX 63405646 63405743 -103244553 + ID4 SINE ID 8 102 -50 5 1068 226 380 9 48 chrX 63406053 63406158 -103244138 - MER77 LTR ERVL -410 197 97 5 1068 22 0 0 0 chrX 63407376 63407398 -103242898 + AT_rich Low_complexity Low_complexity 1 22 0 5 1068 229 377 41 0 chrX 63407598 63407720 -103242576 - MTE2b LTR MaLR -248 131 5 5 1068 225 162 0 0 chrX 63407773 63407810 -103242486 + RLTR11A LTR ERVK 487 523 -5 5 1068 456 67 0 0 chrX 63408291 63408351 -103241945 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 1068 691 260 11 58 chrX 63408488 63408676 -103241620 - B4 SINE B4 -112 180 2 5 1068 247 360 88 23 chrX 63408807 63409023 -103241273 + MER63C DNA AcHobo 460 689 -241 5 1068 258 160 0 0 chrX 63409100 63409150 -103241146 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 5 1068 392 270 21 42 chrX 63409272 63409415 -103240881 + RLTR12B LTR ERVK 32 171 -357 5 1068 518 282 91 96 chrX 63409709 63410105 -103240191 + RLTR12B LTR ERVK 121 514 -14 5 1068 341 252 138 51 chrX 63410479 63410617 -103239679 + RMER15 LTR ERVL 411 560 -15 5 1068 231 170 57 0 chrX 63410658 63410711 -103239585 - Lx9 LINE L1 -160 7484 7429 5 1068 695 253 31 19 chrX 63410728 63410889 -103239407 + Lx9 LINE L1 6598 6760 -884 5 1068 387 0 0 0 chrX 63412208 63412251 -103238045 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 1068 183 129 0 0 chrX 63413312 63413343 -103236953 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5 1068 22 35 0 0 chrX 63413475 63413504 -103236792 + AT_rich Low_complexity Low_complexity 1 29 0 5 1068 414 0 0 0 chrX 63414172 63414218 -103236078 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1068 240 122 0 0 chrX 63414221 63414262 -103236034 + (CATATA)n Simple_repeat Simple_repeat 5 45 0 5 1068 312 347 64 10 chrX 63414265 63414579 -103235717 + L1_Rod LINE L1 936 1266 -6342 5 1068 21 0 0 0 chrX 63414620 63414641 -103235655 + AT_rich Low_complexity Low_complexity 1 21 0 5 1068 310 352 31 0 chrX 63414645 63414773 -103235523 + MER95 LTR ERV 147 278 -153 5 1068 494 149 0 11 chrX 63414781 63414869 -103235427 - Lx4B LINE L1 -316 6742 6656 5 1068 818 70 0 9 chrX 63414922 63415037 -103235259 + (GAAA)n Simple_repeat Simple_repeat 3 116 0 5 1068 434 18 18 0 chrX 63415066 63415121 -103235175 + (GAAAA)n Simple_repeat Simple_repeat 2 57 0 5 1068 1185 309 131 43 chrX 63415121 63416070 -103234226 + L1_Rod LINE L1 1255 2226 -3621 5 1068 213 39 0 0 chrX 63416070 63416096 -103234200 + (CAA)n Simple_repeat Simple_repeat 3 28 0 5 1068 1185 309 131 43 chrX 63416096 63416578 -103233718 + L1_Rod LINE L1 2227 2810 -3037 5 1068 2047 223 52 10 chrX 63416580 63417195 -103233101 + L1_Mur3 LINE L1 2006 2646 -3234 5 1068 334 221 0 0 chrX 63417300 63417368 -103232928 + Lx7 LINE L1 371 438 -6196 5 1068 14385 180 93 10 chrX 63417375 63419436 -103230860 + Lx7 LINE L1 382 2553 -3333 5 1068 3488 78 12 62 chrX 63419436 63419955 -103230341 - MT2_Mm LTR ERVL 0 493 1 5 1068 14385 208 134 17 chrX 63419955 63420450 -103229846 + Lx7 LINE L1 2554 3046 -2840 5 1068 4482 66 2 37 chrX 63420450 63421076 -103229220 + L1Md_F2 LINE L1 5979 6582 0 5 1068 14385 208 134 17 chrX 63421076 63422248 -103228048 + Lx7 LINE L1 3047 4381 -1505 5 1068 488 45 15 0 chrX 63422248 63422315 -103227981 + (CA)n Simple_repeat Simple_repeat 2 69 0 5 1068 14385 208 134 17 chrX 63422315 63422842 -103227454 + Lx7 LINE L1 4382 5144 -742 5 1068 333 0 0 0 chrX 63422842 63422879 -103227417 + (TTTTG)n Simple_repeat Simple_repeat 1 37 0 5 1068 14385 208 134 17 chrX 63422879 63423043 -103227253 + Lx7 LINE L1 5145 5311 -575 5 1068 5607 39 0 3 chrX 63423043 63423720 -103226576 + L1Md_F2 LINE L1 5908 6582 0 5 1068 14385 240 66 19 chrX 63423720 63426039 -103224257 + Lx7 LINE L1 5312 7687 -9 5 1068 2543 177 56 20 chrX 63426041 63426543 -103223753 - RMER1B Other Other -4 1062 543 5 1068 225 214 0 0 chrX 63426583 63426625 -103223671 + A-rich Low_complexity Low_complexity 1 42 0 5 1068 340 278 21 13 chrX 63426625 63426803 -103223493 + L1_Rod LINE L1 2833 3025 -3118 5 1068 21 0 0 0 chrX 63426978 63426999 -103223297 + AT_rich Low_complexity Low_complexity 1 21 0 5 1068 565 279 98 27 chrX 63426999 63427595 -103222701 + L1MD LINE L1 3031 3732 -2414 5 1068 300 276 25 10 chrX 63427594 63427722 -103222574 + Lx8 LINE L1 5834 5965 -1679 5 1068 4636 150 29 35 chrX 63427738 63428663 -103221633 + L1Md_F LINE L1 286 1205 -5411 5 1068 13881 46 0 0 chrX 63428669 63430455 -103219841 + L1Md_F LINE L1 1170 2955 -2928 5 1068 341 39 0 0 chrX 63430455 63430507 -103219789 + L1Md_T LINE L1 6531 6582 0 5 1068 823 298 107 49 chrX 63430663 63431311 -103218985 + Lx8 LINE L1 6109 6793 -680 5 1068 488 194 48 19 chrX 63431311 63431416 -103218880 - RMER12B LTR ERVK 0 1404 1297 5 1068 758 184 58 78 chrX 63431412 63431618 -103218678 + RLTR21 LTR ERVK 893 1094 -478 5 1068 381 58 0 0 chrX 63431618 63431670 -103218626 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1068 293 244 134 0 chrX 63431670 63431720 -103218576 + RMER12B LTR ERVK 1255 1314 -90 5 1068 422 217 124 98 chrX 63431720 63431873 -103218423 - RLTR21 LTR ERVK -900 672 516 5 1068 252 188 116 0 chrX 63431880 63431949 -103218347 + Lx4A LINE L1 6981 7057 -1 5 1068 45 0 0 0 chrX 63431949 63431994 -103218302 + AT_rich Low_complexity Low_complexity 1 45 0 5 1068 772 269 25 15 chrX 63432014 63432214 -103218082 + RMER1C Other Other 790 991 -351 5 1068 253 75 25 0 chrX 63432184 63432224 -103218072 - Lx4A LINE L1 -110 6948 6908 5 1068 298 264 56 0 chrX 63432226 63432298 -103217998 - MTC LTR MaLR -343 78 3 5 1068 21 0 0 0 chrX 63432302 63432323 -103217973 + AT_rich Low_complexity Low_complexity 1 21 0 5 1068 25 0 0 0 chrX 63432599 63432624 -103217672 + AT_rich Low_complexity Low_complexity 1 25 0 5 1068 236 272 32 21 chrX 63433596 63433690 -103216606 + Tigger15a DNA TcMar 471 565 -150 5 1068 293 253 94 24 chrX 63434093 63434178 -103216118 + MLT1A0 LTR MaLR 275 365 0 5 1068 4562 232 55 52 chrX 63434481 63436022 -103214274 + Lx5 LINE L1 5479 7035 -15 5 1068 33 43 0 0 chrX 63436094 63436141 -103214155 + AT_rich Low_complexity Low_complexity 1 47 0 5 1068 7675 74 3 0 chrX 63436153 63437279 -103213017 + L1_Mus1 LINE L1 5440 6567 0 5 1068 23 0 0 0 chrX 63437279 63437302 -103212994 + AT_rich Low_complexity Low_complexity 1 23 0 5 1068 231 350 157 18 chrX 63437619 63437785 -103212511 + MLT1H2 LTR MaLR 76 264 -225 5 1068 415 287 141 124 chrX 63437789 63438087 -103212209 - MLT1G1 LTR MaLR -10 479 177 5 133 7086 140 24 7 chrX 63438497 63439669 -103210627 + Lx2 LINE L1 5802 6993 -4 5 1069 609 14 0 0 chrX 63439856 63439926 -103210370 + (GA)n Simple_repeat Simple_repeat 2 71 0 6 1069 205 191 21 21 chrX 63439926 63439974 -103210322 + GA-rich Low_complexity Low_complexity 2 49 0 6 1069 26 30 0 0 chrX 63440420 63440453 -103209843 + AT_rich Low_complexity Low_complexity 1 33 0 6 1069 25 65 0 0 chrX 63440478 63440524 -103209772 + AT_rich Low_complexity Low_complexity 1 46 0 6 1069 238 115 33 0 chrX 63442939 63443000 -103207296 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 6 1069 896 304 114 13 chrX 63443326 63443633 -103206663 + ORR1D2 LTR MaLR 33 370 0 6 1069 489 176 0 38 chrX 63443711 63443817 -103206479 + Lx3A LINE L1 6875 6976 -5 6 1069 32 57 0 0 chrX 63443825 63443878 -103206418 + AT_rich Low_complexity Low_complexity 1 53 0 6 1069 314 346 0 68 chrX 63444337 63444483 -103205813 - RMER4A LTR ERVK -303 163 28 6 1069 778 309 125 28 chrX 63444875 63445195 -103205101 - ORR1E LTR MaLR 0 359 9 6 1069 1010 251 14 0 chrX 63446074 63446285 -103204011 - B3 SINE B2 0 216 3 6 1069 577 303 30 126 chrX 63446310 63446612 -103203684 - MLT1A0 LTR MaLR -4 361 89 6 1069 210 320 93 0 chrX 63446823 63446920 -103203376 + L2a LINE L2 1853 1958 -1461 6 1069 1773 68 0 78 chrX 63446922 63447193 -103203103 - L1_Mus2 LINE L1 -1 6565 6316 6 1069 254 271 28 67 chrX 63447280 63447458 -103202838 + L2a LINE L2 3190 3360 -66 6 1069 23 0 0 0 chrX 63448864 63448887 -103201409 + AT_rich Low_complexity Low_complexity 1 23 0 6 1069 293 383 110 45 chrX 63449368 63449996 -103200300 - L2 LINE L2 -448 2971 2294 6 1069 1045 99 28 0 chrX 63449996 63450137 -103200159 + B1_Mus2 SINE Alu 2 146 -1 6 1069 293 383 110 45 chrX 63450137 63450203 -103200093 - L2 LINE L2 -1126 2293 2230 6 1069 289 296 0 0 chrX 63450203 63450274 -103200022 + ID2 SINE ID 3 73 -10 6 1069 293 383 110 45 chrX 63450274 63450387 -103199909 - L2 LINE L2 -1190 2229 2111 6 1069 409 346 96 12 chrX 63450516 63450756 -103199540 - L2 LINE L2 -1290 2129 1870 6 1069 22 35 0 0 chrX 63450897 63450926 -103199370 + AT_rich Low_complexity Low_complexity 1 29 0 6 1069 25 51 0 0 chrX 63451135 63451174 -103199122 + AT_rich Low_complexity Low_complexity 1 39 0 6 1069 3857 143 11 0 chrX 63451177 63451806 -103198490 - L1_Mus3 LINE L1 -5 6633 5998 6 1069 7023 66 3 113 chrX 63451810 63452963 -103197333 - L1Md_F2 LINE L1 -3 6579 5555 6 1069 2127 133 0 0 chrX 63452963 63453272 -103197024 - RLTR27 LTR ERVK 0 309 1 6 1069 1451 263 41 38 chrX 63453272 63454308 -103195988 - MMERVK10C-int LTR ERVK 0 7581 6437 6 1069 7274 306 35 41 chrX 63454361 63456683 -103193613 - MMERVK10C-int LTR ERVK -2116 5465 1023 6 1069 180 0 0 0 chrX 63456683 63456703 -103193593 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 6 1069 7274 309 35 41 chrX 63456703 63458759 -103191537 - MMERVK10C-int LTR ERVK -4424 3157 1128 6 1069 286 222 9 61 chrX 63459096 63459166 -103191130 - MMERVK10C-int LTR ERVK -1136 851 789 6 1069 3570 62 2 0 chrX 63459166 63459619 -103190677 + L1Md_F2 LINE L1 6117 6570 -12 6 1069 286 222 9 61 chrX 63459619 63459663 -103190633 - MMERVK10C-int LTR ERVK -1199 788 744 6 1069 308 130 0 0 chrX 63459810 63459856 -103190440 - MMERVK10C-int LTR ERVK -7314 267 222 6 1069 2033 141 10 0 chrX 63459893 63460199 -103190097 - RLTR27 LTR ERVK 0 309 1 6 1069 26085 123 12 27 chrX 63460199 63461724 -103188572 - L1VL4 LINE L1 -321 5562 4116 6 1069 1221 21 7 0 chrX 63461724 63461869 -103188427 - B1_Mm SINE Alu 0 147 2 6 1069 378 0 0 0 chrX 63461869 63461911 -103188385 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 6 1069 26085 131 15 24 chrX 63461911 63465447 -103184849 - L1VL4 LINE L1 -1768 4115 889 6 1069 4117 236 51 39 chrX 63465443 63466111 -103184185 - L1VL4 LINE L1 -3046 2834 2180 6 1069 4993 106 48 7 chrX 63466111 63466855 -103183441 - Lx3_Mus LINE L1 -8 7001 6227 6 1069 4117 236 51 39 chrX 63466855 63467484 -103182812 - L1VL4 LINE L1 -3701 2179 1522 6 1069 441 335 54 18 chrX 63467497 63467944 -103182352 - L1M2 LINE L1 -3495 2648 2175 6 1069 1257 183 105 33 chrX 63467944 63468249 -103182047 - ORR1A4 LTR MaLR 0 329 3 6 1069 236 335 74 40 chrX 63468249 63468301 -103181995 - L1M2 LINE L1 -3673 2174 2128 6 1069 4347 175 105 62 chrX 63468627 63468729 -103181567 + Lx3A LINE L1 24 121 -6863 6 1069 1184 48 7 0 chrX 63468729 63468875 -103181421 + B1_Mm SINE Alu 1 147 0 6 1069 29664 111 53 17 chrX 63468875 63475471 -103174825 + Lx3A LINE L1 122 6965 -16 6 1069 440 0 36 0 chrX 63475473 63475528 -103174768 + (TAAA)n Simple_repeat Simple_repeat 1 57 0 6 1069 1115 281 80 35 chrX 63477014 63477353 -103172943 + MTD LTR MaLR 5 358 -61 6 1069 690 13 0 0 chrX 63477454 63477533 -103172763 + (TC)n Simple_repeat Simple_repeat 2 80 0 6 1069 444 344 122 36 chrX 63477548 63477850 -103172446 + MLT1E2 LTR MaLR 294 621 -6 6 1069 271 320 46 26 chrX 63477848 63477999 -103172297 - Tigger9a DNA Tigger -12 720 567 6 1069 917 278 115 22 chrX 63478058 63478431 -103171865 - MTD LTR MaLR -14 405 2 6 1069 402 267 0 0 chrX 63478622 63478713 -103171583 - MLT1B LTR MaLR -6 461 305 6 1069 505 308 103 0 chrX 63478921 63479067 -103171229 + RSINE1 SINE B4 5 165 0 6 1069 21 36 0 0 chrX 63479095 63479123 -103171173 + AT_rich Low_complexity Low_complexity 1 28 0 6 1069 280 253 33 0 chrX 63479316 63479407 -103170889 - L1MEd LINE L1 -5968 151 58 6 1069 932 295 5 9 chrX 63480883 63481095 -103169201 - B3 SINE B2 -5 211 1 6 1069 424 268 172 6 chrX 63481865 63482045 -103168251 - B3 SINE B2 -2 214 5 6 1069 662 335 42 88 chrX 63482048 63482184 -103168112 + MTE2a LTR MaLR 1 137 -282 6 1069 1759 109 7 14 chrX 63482184 63482462 -103167834 + L1_Mus3 LINE L1 6363 6638 0 6 1069 662 334 19 83 chrX 63482462 63482754 -103167542 + MTE2a LTR MaLR 105 378 -1 6 1069 21 36 0 0 chrX 63482822 63482850 -103167446 + AT_rich Low_complexity Low_complexity 1 28 0 6 1069 501 204 324 5 chrX 63483331 63483547 -103166749 + MTD LTR MaLR 57 380 -39 6 1069 38535 45 23 6 chrX 63483561 63489775 -103160521 - L1Md_A LINE L1 0 6582 261 6 1069 337 369 62 41 chrX 63490325 63490568 -103159728 + L1M4b LINE L1 104 351 -6983 6 1069 311 246 81 57 chrX 63490612 63490823 -103159473 + L1M4b LINE L1 3660 3875 -3131 6 1069 2139 172 21 22 chrX 63491408 63491955 -103158341 - RMER6C LTR ERVK -2 688 10 6 1069 1300 236 28 12 chrX 63492300 63492626 -103157670 + Lx9 LINE L1 7101 7431 -213 6 1069 295 98 0 32 chrX 63493048 63493111 -103157185 + (CAAAAA)n Simple_repeat Simple_repeat 2 62 0 6 1069 195 364 79 28 chrX 63494428 63494606 -103155690 + MIRb SINE MIR 48 234 -34 6 1069 224 305 92 97 chrX 63495065 63495272 -103155024 + MIRb SINE MIR 63 268 0 6 1069 180 0 0 0 chrX 63495375 63495395 -103154901 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 6 1069 290 324 149 19 chrX 63495426 63495640 -103154656 - L2a LINE L2 -250 3176 2935 6 1069 417 316 176 48 chrX 63496149 63496382 -103153914 + Lx8 LINE L1 7050 7325 -148 6 1069 519 17 0 0 chrX 63496382 63496442 -103153854 + (TA)n Simple_repeat Simple_repeat 2 61 0 6 1069 417 316 176 48 chrX 63496442 63496584 -103153712 + Lx8 LINE L1 7326 7472 -1 6 1069 247 351 104 0 chrX 63496754 63496888 -103153408 + Lx8 LINE L1 7047 7194 -279 6 1069 261 333 37 0 chrX 63497166 63497274 -103153022 + MIR SINE MIR 79 190 -72 6 1069 773 150 7 22 chrX 63498119 63498255 -103152041 + B1_Mm SINE Alu 2 135 -12 6 1069 558 0 0 0 chrX 63498256 63498318 -103151978 + (GA)n Simple_repeat Simple_repeat 2 63 0 6 1069 2010 298 40 18 chrX 63498942 63499601 -103150695 + Lx8 LINE L1 6131 6803 -670 6 1069 1845 187 18 71 chrX 63499602 63499994 -103150302 - ORR1C1 LTR MaLR 0 378 8 6 1069 1510 305 55 27 chrX 63500001 63500601 -103149695 + Lx8 LINE L1 6800 7416 -57 1 1069 247 315 11 33 chrX 63500888 63500980 -103149316 + MER92B LTR ERV1 471 560 -76 2 1069 228 43 43 21 chrX 63502168 63502215 -103148081 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 3 1069 900 295 46 19 chrX 63502898 63503325 -103146971 - Lx7 LINE L1 -1787 5909 5452 4 1069 1094 336 56 5 chrX 63503594 63503970 -103146326 + MTD LTR MaLR 20 401 -18 5 1069 1836 166 63 30 chrX 63505137 63505503 -103144793 - ORR1C1 LTR MaLR 0 378 1 6 1069 1278 287 75 8 chrX 63505513 63505902 -103144394 - MTD LTR MaLR -20 399 1 7 1069 378 219 97 0 chrX 63505917 63506031 -103144265 - MTD-int LTR MaLR -15 1243 1119 7 1069 24 53 0 0 chrX 63506031 63506069 -103144227 + AT_rich Low_complexity Low_complexity 1 38 0 8 1069 1977 318 58 10 chrX 63506070 63506741 -103143555 - Lx8 LINE L1 -271 7202 6500 9 1069 1852 101 7 7 chrX 63506741 63507020 -103143276 + Lx LINE L1 6370 6648 -6 1 1069 187 94 94 0 chrX 63507107 63507171 -103143125 + (TTATA)n Simple_repeat Simple_repeat 4 73 0 1 1069 29 0 0 0 chrX 63507173 63507202 -103143094 + AT_rich Low_complexity Low_complexity 1 29 0 1 1069 9797 51 1 1 chrX 63507216 63509136 -103141160 - L1Md_F2 LINE L1 -2 6580 4662 1 1069 740 314 67 49 chrX 63509964 63510309 -103139987 + MLT1A0 LTR MaLR 14 364 -1 1 1069 397 233 19 46 chrX 63510387 63510495 -103139801 + MLT1A LTR MaLR 269 373 -1 1 1069 22 56 0 0 chrX 63510819 63510855 -103139441 + AT_rich Low_complexity Low_complexity 1 36 0 1 1069 312 416 63 5 chrX 63512199 63512390 -103137906 - MLT2B4 LTR ERVL -200 356 155 1 1069 2344 257 138 118 chrX 63512410 63513494 -103136802 + ORR1D2-int LTR MaLR 53 1159 -211 1 1069 261 0 0 0 chrX 63513494 63513523 -103136773 + (GA)n Simple_repeat Simple_repeat 2 30 0 1 1069 2344 257 138 118 chrX 63513523 63513601 -103136695 + ORR1D2-int LTR MaLR 1160 1238 -132 1 1069 628 209 42 21 chrX 63513589 63513731 -103136565 + ORR1D2 LTR MaLR 226 370 0 1 1069 267 169 31 0 chrX 63513848 63513913 -103136383 + (TA)n Simple_repeat Simple_repeat 1 67 0 2 1069 673 198 0 55 chrX 63513986 63514114 -103136182 + B1_Mus2 SINE Alu 21 141 -6 2 1069 27 49 0 0 chrX 63514122 63514163 -103136133 + AT_rich Low_complexity Low_complexity 1 41 0 2 1069 314 323 72 31 chrX 63514764 63514959 -103135337 + L1MCa LINE L1 244 446 -6305 2 1069 756 355 62 4 chrX 63515339 63515613 -103134683 - ORR1D2 LTR MaLR 0 370 81 2 1069 1632 254 44 233 chrX 63515646 63516688 -103133608 - ORR1D2-int LTR MaLR 0 1370 526 2 1069 12152 150 37 24 chrX 63516691 63518449 -103131847 + L1_Mur2 LINE L1 3014 4794 -1083 2 1069 294 29 0 0 chrX 63518449 63518484 -103131812 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1069 12152 150 37 24 chrX 63518484 63519148 -103131148 + L1_Mur2 LINE L1 4795 5466 -411 2 1069 26753 21 20 20 chrX 63519138 63521715 -103128581 + L1_Mm LINE L1 2289 4917 -966 2 1069 225 183 46 77 chrX 63521715 63521780 -103128516 - RMER20A LTR ERVK -268 248 186 2 1069 26753 21 20 20 chrX 63521780 63522433 -103127863 + L1_Mm LINE L1 4918 5585 -298 2 1069 8235 38 2 0 chrX 63522434 63523428 -103126868 + L1Md_A LINE L1 5587 6582 0 2 1069 1133 139 0 0 chrX 63523437 63523610 -103126686 + L1_Mur2 LINE L1 5442 5614 -263 2 1069 356 205 130 26 chrX 63523626 63523741 -103126555 + Lx4B LINE L1 6928 7054 -4 3 1069 300 256 0 53 chrX 63523775 63523870 -103126426 - ORR1D2 LTR MaLR -237 133 44 3 1069 362 323 124 71 chrX 63523880 63524090 -103126206 - MLT2B4 LTR ERVL -204 352 132 3 1069 242 139 47 0 chrX 63524182 63524225 -103126071 - Lx9 LINE L1 -815 6829 6785 3 1069 268 137 0 150 chrX 63524224 63524284 -103126012 + Lx9 LINE L1 6872 6922 -722 3 1069 384 243 215 0 chrX 63524290 63524397 -103125899 + B1_Mus2 SINE Alu 5 134 -13 3 1069 2167 111 3 6 chrX 63524405 63524731 -103125565 - L1_Mus4 LINE L1 -7 6629 6305 3 1069 3266 202 42 18 chrX 63524738 63525450 -103124846 + Lx9 LINE L1 6908 7636 -8 3 1069 280 319 21 36 chrX 63525544 63525684 -103124612 + L1MCa LINE L1 454 591 -5454 2 1069 725 293 24 0 chrX 63526280 63526488 -103123808 + B3 SINE B2 2 214 -2 3 1069 903 312 43 36 chrX 63526605 63527002 -103123294 + MER92B LTR ERV1 4 370 -266 3 1069 880 219 67 5 chrX 63527299 63527492 -103122804 - Lx4A LINE L1 -2 7056 6852 3 1069 189 74 0 0 chrX 63527508 63527535 -103122761 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3 1069 1586 178 23 30 chrX 63527535 63527836 -103122460 - Lx4A LINE L1 -6 7052 6754 4 1069 274 230 94 57 chrX 63527838 63527944 -103122352 - RMER5 LTR ERV1 -265 269 160 4 1069 1709 316 30 8 chrX 63527958 63528494 -103121802 + Lx8 LINE L1 6339 6886 -587 4 1069 411 21 0 0 chrX 63528495 63528543 -103121753 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1069 1073 272 85 29 chrX 63528543 63528727 -103121569 + Lx8 LINE L1 6955 7150 -323 4 1069 1431 236 70 3 chrX 63528727 63529071 -103121225 - ORR1D2 LTR MaLR -1 369 3 4 1069 1073 272 85 29 chrX 63529071 63529135 -103121161 + Lx8 LINE L1 7151 7213 -260 4 1069 714 81 0 0 chrX 63529135 63529246 -103121050 + (GA)n Simple_repeat Simple_repeat 1 111 0 4 1069 1073 282 59 16 chrX 63529246 63529572 -103120724 + Lx8 LINE L1 7214 7349 -124 4 1069 1688 312 34 35 chrX 63529599 63530453 -103119843 + Lx8 LINE L1 5001 5853 -27 4 1069 221 146 21 0 chrX 63530615 63530663 -103119633 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1069 1906 285 38 101 chrX 63530663 63531472 -103118824 + Lx8 LINE L1 6195 6952 -521 4 1069 212 211 14 14 chrX 63531482 63531554 -103118742 + (TA)n Simple_repeat Simple_repeat 1 72 0 4 1069 6375 164 53 0 chrX 63531554 63532673 -103117623 + Lx4A LINE L1 5878 7055 -3 4 1069 351 173 36 7 chrX 63533068 63533208 -103117088 + (TA)n Simple_repeat Simple_repeat 2 145 0 4 1069 1757 256 12 63 chrX 63533209 63533767 -103116529 + Lx8 LINE L1 6944 7473 0 4 1069 427 307 74 40 chrX 63533859 63534263 -103116033 + L1MCa LINE L1 1996 2413 -4095 5 1069 1333 189 16 54 chrX 63536489 63536802 -103113494 - Lx7 LINE L1 -20 7676 7376 5 1069 25 0 0 0 chrX 63536846 63536871 -103113425 + AT_rich Low_complexity Low_complexity 1 25 0 5 1069 4822 223 60 59 chrX 63536882 63538161 -103112135 - Lx7 LINE L1 -335 7361 6082 5 1069 720 358 89 30 chrX 63538204 63538763 -103111533 - L2 LINE L2 -656 2763 2172 5 1069 408 198 0 0 chrX 63538832 63538913 -103111383 - L1M2 LINE L1 -2408 3735 3655 5 1069 15176 102 17 15 chrX 63538914 63539070 -103111226 - L1VL2 LINE L1 -282 3333 3177 5 1069 3372 92 17 8 chrX 63539070 63539541 -103110755 + MT2C_Mm LTR ERVL 1 475 0 5 1069 15176 103 16 14 chrX 63539541 63542063 -103108233 - L1VL2 LINE L1 -439 3176 649 5 1069 1456 208 39 3 chrX 63542063 63542348 -103107948 - ORR1B1 LTR MaLR -97 297 3 5 1069 257 394 135 35 chrX 63542414 63542867 -103107429 - MLT1G1 LTR MaLR 0 579 82 5 1069 1169 105 0 22 chrX 63542925 63543110 -103107186 - L1_Mus2 LINE L1 -1 6565 6385 5 1069 511 338 169 19 chrX 63543113 63543598 -103106698 - L2 LINE L2 -1479 1940 1383 5 1069 790 300 91 35 chrX 63543853 63544250 -103106046 - MTD LTR MaLR 0 419 1 6 1069 1136 259 6 49 chrX 63544291 63544462 -103105834 - Lx8 LINE L1 -462 7011 6846 6 1069 3718 160 54 24 chrX 63544462 63545134 -103105162 + RLTR17 LTR ERVK 1 692 0 6 1069 1136 259 6 49 chrX 63545134 63545287 -103105009 - Lx8 LINE L1 -628 6845 6701 6 1069 757 281 45 45 chrX 63545287 63545686 -103104610 - L1M3 LINE L1 -847 5293 4895 6 1069 281 314 76 76 chrX 63545742 63545873 -103104423 - L2 LINE L2 -3263 156 26 5 1069 1066 109 0 0 chrX 63545873 63546020 -103104276 + B1_Mm SINE Alu 1 147 0 6 1069 1742 163 9 0 chrX 63546538 63546857 -103103439 + Lx2 LINE L1 5085 5406 -471 6 1069 8202 140 51 3 chrX 63546835 63548238 -103102058 + Lx2 LINE L1 5513 6996 -1 6 1069 200 189 12 75 chrX 63548463 63548543 -103101753 + T-rich Low_complexity Low_complexity 2 76 0 6 1069 22 0 0 0 chrX 63548584 63548606 -103101690 + AT_rich Low_complexity Low_complexity 1 22 0 6 1069 307 283 93 68 chrX 63549581 63549786 -103100510 - L1M5 LINE L1 -516 5678 5469 6 1069 474 317 17 0 chrX 63550111 63550231 -103100065 + B3A SINE B2 9 130 -68 6 1069 6320 41 0 0 chrX 63550385 63551140 -103099156 + L1Md_T LINE L1 5828 6582 0 7 1069 438 36 0 0 chrX 63551169 63551225 -103099071 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 1069 8315 72 10 0 chrX 63551331 63552416 -103097880 + L1Md_F2 LINE L1 4490 5585 -298 7 1069 7793 59 3 0 chrX 63552417 63553407 -103096889 + L1Md_F2 LINE L1 5587 6579 -3 7 1069 1227 91 157 11 chrX 63553479 63553781 -103096515 - L1_Mus2 LINE L1 -7 6575 6194 7 1069 374 280 86 21 chrX 63554956 63555142 -103095154 + L1MEc LINE L1 991 1188 -5212 7 1069 317 343 58 7 chrX 63555419 63555557 -103094739 + B1F2 SINE Alu 5 149 0 7 1069 446 233 38 26 chrX 63555666 63555837 -103094459 - L1M1 LINE L1 -724 5449 5278 7 1069 279 232 0 28 chrX 63555898 63555969 -103094327 - MTEb LTR MaLR 0 379 311 7 1069 210 71 0 0 chrX 63557769 63557797 -103092499 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 7 1069 1148 119 0 0 chrX 63557799 63557959 -103092337 - B2_Mm2 SINE B2 -34 161 2 7 1069 308 283 94 50 chrX 63557972 63558132 -103092164 - Lx8 LINE L1 0 7473 7307 8 1069 2025 272 82 59 chrX 63558119 63558878 -103091418 - Lx8 LINE L1 -321 7152 6377 8 1069 252 286 47 63 chrX 63559066 63559193 -103091103 + L1ME1 LINE L1 5614 5738 -441 8 1069 379 155 0 0 chrX 63559380 63559438 -103090858 + B1_Mur2 SINE Alu 85 142 -7 8 1069 399 197 201 45 chrX 63559656 63559810 -103090486 + L1ME1 LINE L1 5840 6017 -2025 8 1069 7963 44 0 3 chrX 63560422 63561388 -103088908 - L1Md_T LINE L1 -1 6581 5619 8 1069 455 258 0 82 chrX 63561890 63562025 -103088271 - B3 SINE B2 -3 213 90 8 1069 25695 133 13 22 chrX 63562116 63567085 -103083211 - L1Md_F LINE L1 -512 5371 504 8 1069 21 0 0 0 chrX 63567125 63567146 -103083150 + AT_rich Low_complexity Low_complexity 1 21 0 8 1069 4202 86 42 2 chrX 63567353 63567596 -103082700 - L1_Mus3 LINE L1 0 6638 6386 8 1069 255 61 0 0 chrX 63567596 63567629 -103082667 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 8 1069 4202 86 42 2 chrX 63567629 63567982 -103082314 - L1_Mus3 LINE L1 -253 6385 6019 8 1069 220 102 61 0 chrX 63568008 63568057 -103082239 + (TA)n Simple_repeat Simple_repeat 2 53 0 8 1069 25 31 0 0 chrX 63568072 63568104 -103082192 + AT_rich Low_complexity Low_complexity 1 32 0 9 1069 22 80 0 0 chrX 63568198 63568248 -103082048 + AT_rich Low_complexity Low_complexity 1 50 0 9 1069 23 0 0 0 chrX 63568268 63568291 -103082005 + AT_rich Low_complexity Low_complexity 1 23 0 9 1069 567 66 0 0 chrX 63568369 63568445 -103081851 + (GAAAA)n Simple_repeat Simple_repeat 2 77 0 9 133 11290 22 1 1 chrX 63568660 63569986 -103080310 + L1Md_A LINE L1 4261 5586 -297 9 1070 8208 39 5 0 chrX 63569986 63570975 -103079321 + L1Md_A LINE L1 5587 6580 -2 9 1070 2158 51 11 0 chrX 63572290 63572566 -103077730 + L1Md_F2 LINE L1 6291 6569 -13 9 1070 1838 152 30 155 chrX 63575085 63575576 -103074720 + RLTR23 LTR ERV1 1 430 0 9 1070 540 269 43 58 chrX 63578701 63579006 -103071290 - Lx8 LINE L1 -1537 6107 5789 9 1070 1275 329 24 33 chrX 63579034 63579610 -103070686 + Lx7 LINE L1 6593 7163 -533 9 1070 3885 56 12 2 chrX 63579610 63580107 -103070189 + L1Md_F2 LINE L1 6081 6582 0 9 1070 20651 136 5 10 chrX 63580107 63584497 -103065799 + L1_Mus2 LINE L1 310 4677 -1206 1 1070 35358 35 1 0 chrX 63584494 63589938 -103060358 + L1Md_T LINE L1 44 5589 -297 1 1070 8904 9 0 0 chrX 63589938 63590934 -103059362 + L1Md_T LINE L1 5590 6585 0 1 1070 7055 128 35 15 chrX 63590940 63592491 -103057805 + L1_Mus2 LINE L1 4668 6284 -282 1 1070 3405 35 0 0 chrX 63592491 63592887 -103057409 + MTA_Mm LTR MaLR 1 396 0 1 1070 6008 126 9 31 chrX 63592887 63593193 -103057103 + L1_Mus2 LINE L1 6285 6566 0 1 1070 7306 38 0 5 chrX 63593233 63594118 -103056178 - L1Md_F3 LINE L1 -14 6570 5690 1 1070 9303 48 1 3 chrX 63594116 63595272 -103055024 + L1Md_F3 LINE L1 4541 5693 -190 1 1070 222 186 34 0 chrX 63595295 63595354 -103054942 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 1070 746 303 14 38 chrX 63595783 63596071 -103054225 + MTD LTR MaLR 1 281 -138 1 1070 1521 175 9 51 chrX 63596020 63596429 -103053867 + RMER17C LTR ERVK 19 439 -519 1 1070 1784 54 0 0 chrX 63596440 63596663 -103053633 - L1Md_F2 LINE L1 -12 6570 6348 1 1070 906 213 5 27 chrX 63596694 63596882 -103053414 + MTD LTR MaLR 236 419 0 1 1070 23 78 0 0 chrX 63597062 63597113 -103053183 + AT_rich Low_complexity Low_complexity 1 51 0 1 1070 4533 140 36 51 chrX 63597609 63598328 -103051968 + L1Md_F2 LINE L1 371 1106 -5510 1 1070 4923 44 2 3 chrX 63598328 63598939 -103051357 + L1Md_F3 LINE L1 5961 6570 -14 1 1070 30735 93 2 4 chrX 63598939 63603455 -103046841 + L1Md_F2 LINE L1 1107 5585 -298 1 1070 7339 88 0 2 chrX 63603456 63604454 -103045842 + L1Md_F2 LINE L1 5587 6582 0 1 1070 461 366 62 44 chrX 63604597 63604823 -103045473 + MIR SINE MIR 30 259 -3 1 1070 25 31 0 0 chrX 63605150 63605182 -103045114 + AT_rich Low_complexity Low_complexity 1 32 0 1 1070 231 229 0 0 chrX 63606751 63606799 -103043497 - MIR SINE MIR 0 262 215 1 1070 378 0 0 0 chrX 63607161 63607203 -103043093 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1070 2290 87 3 69 chrX 63607362 63607708 -103042588 + ORR1A2 LTR MaLR 5 327 0 1 1070 3129 188 57 21 chrX 63607708 63608846 -103041450 + ORR1A2-int LTR MaLR 1 1901 -62 1 1070 14234 53 3 0 chrX 63608848 63611365 -103038931 - L1Md_F2 LINE L1 -12 6570 4046 1 1070 494 111 0 14 chrX 63611365 63611438 -103038858 + ORR1A2-int LTR MaLR 1892 1963 0 1 1070 1956 117 3 97 chrX 63611438 63611799 -103038497 + ORR1A2 LTR MaLR 1 327 0 1 1070 21 0 0 0 chrX 63611825 63611846 -103038450 + AT_rich Low_complexity Low_complexity 1 21 0 1 1070 364 338 34 108 chrX 63611935 63612111 -103038185 - RSINE1 SINE B4 0 165 3 1 1070 29 0 0 0 chrX 63612126 63612155 -103038141 + AT_rich Low_complexity Low_complexity 1 29 0 1 1070 245 51 0 25 chrX 63612587 63612627 -103037669 + (TAA)n Simple_repeat Simple_repeat 1 39 0 1 1070 1009 308 14 10 chrX 63612723 63613018 -103037278 + Lx8 LINE L1 6461 6756 -717 1 1070 366 319 26 17 chrX 63613014 63613129 -103037167 + Lx8 LINE L1 7210 7325 -148 1 1070 517 348 29 7 chrX 63614047 63614183 -103036113 + RSINE1 SINE B4 3 141 -24 1 1070 828 63 0 0 chrX 63614190 63614301 -103035995 + (CA)n Simple_repeat Simple_repeat 2 112 0 1 1070 1348 279 97 3 chrX 63614315 63614685 -103035611 - MTD LTR MaLR -14 405 1 1 1070 226 326 11 11 chrX 63614724 63614817 -103035479 + MLT1B LTR MaLR 53 145 -245 1 1070 4051 234 111 20 chrX 63615330 63615352 -103034944 - Lx6 LINE L1 -8 7452 7431 1 1070 5782 87 7 33 chrX 63615352 63616030 -103034266 - L1_Mus3 LINE L1 -2 6636 5973 1 1070 714 55 0 0 chrX 63616030 63616121 -103034175 + (TCC)n Simple_repeat Simple_repeat 3 93 0 1 1070 358 35 16 49 chrX 63616126 63616187 -103034109 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 1 1070 1086 65 0 35 chrX 63616187 63616331 -103033965 - B1_Mus2 SINE Alu -8 139 1 1 1070 5782 87 7 33 chrX 63616331 63616504 -103033792 - L1_Mus3 LINE L1 -666 5972 5801 1 1070 4051 234 111 20 chrX 63616504 63616832 -103033464 - Lx6 LINE L1 -30 7430 7068 1 1070 438 20 0 0 chrX 63616832 63616883 -103033413 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1070 4051 234 111 20 chrX 63616883 63617578 -103032718 - Lx6 LINE L1 -393 7067 6312 1 1070 13937 158 36 54 chrX 63617581 63623389 -103026907 - L1Md_F2 LINE L1 0 6582 955 1 1070 4863 64 5 0 chrX 63623389 63624010 -103026286 - L1Md_F2 LINE L1 -1 6581 5958 1 1070 6511 70 3 20 chrX 63624010 63624272 -103026024 - L1Md_F2 LINE L1 -5662 954 692 1 1070 1902 134 16 7 chrX 63624272 63624580 -103025716 - RLTR10E LTR ERVK 0 311 1 1 1070 6511 70 3 20 chrX 63624580 63624905 -103025391 - L1Md_F2 LINE L1 -5925 691 371 1 1070 1095 282 137 13 chrX 63627305 63627882 -103022414 + L1M2 LINE L1 4300 4966 -1177 1 1070 404 205 13 44 chrX 63627895 63628008 -103022288 - RLTR21 LTR ERVK -136 1436 1282 1 1070 459 35 0 0 chrX 63628043 63628100 -103022196 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1070 373 198 10 71 chrX 63628103 63628201 -103022095 - RLTR23 LTR ERV1 0 430 339 1 1070 403 239 179 6 chrX 63628664 63628820 -103021476 - RLTR21 LTR ERVK -377 1195 1013 1 1070 24001 126 11 20 chrX 63628820 63630881 -103019415 - L1VL1 LINE L1 -640 5243 3179 1 1070 216 0 0 0 chrX 63630881 63630905 -103019391 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1070 24001 123 7 13 chrX 63630905 63633902 -103016394 - L1VL1 LINE L1 -2705 3178 221 1 1070 4495 204 28 50 chrX 63633902 63634934 -103015362 - RLTR21 LTR ERVK -546 1026 18 1 1070 3545 318 51 61 chrX 63634940 63637367 -103012929 + Lx8 LINE L1 4928 7254 -219 1 1070 4641 160 39 77 chrX 63637367 63638300 -103011996 - RMER19B LTR ERVK 0 902 6 1 1070 514 327 42 9 chrX 63638301 63638517 -103011779 + Lx8 LINE L1 7250 7472 -1 1 1070 245 137 151 0 chrX 63638627 63638700 -103011596 + Lx9 LINE L1 7553 7636 -8 1 1070 210 37 0 0 chrX 63639323 63639350 -103010946 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1 1070 221 260 19 19 chrX 63640637 63640743 -103009553 + (TCTA)n Simple_repeat Simple_repeat 2 107 0 1 1070 1676 84 12 8 chrX 63641114 63641354 -103008942 - L1_Mus1 LINE L1 -1 6566 6326 1 1070 3976 85 0 0 chrX 63641354 63641872 -103008424 + L1_Mm LINE L1 5366 5883 0 1 1070 1120 141 0 99 chrX 63641947 63642160 -103008136 + B2_Mm2 SINE B2 1 192 -3 1 1070 3233 96 4 2 chrX 63642363 63642927 -103007369 - L1Md_F LINE L1 -5556 1168 393 1 1070 324 0 0 0 chrX 63642973 63643009 -103007287 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1070 332 241 59 65 chrX 63643016 63643202 -103007094 + Lx7 LINE L1 7511 7695 -1 1 1070 883 221 78 56 chrX 63645457 63645707 -103004589 + Lx9 LINE L1 7263 7520 -124 1 1070 303 104 0 0 chrX 63645707 63645755 -103004541 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1070 883 221 78 56 chrX 63645755 63645810 -103004486 + Lx9 LINE L1 7521 7575 -69 1 1070 2818 163 14 33 chrX 63645814 63646327 -103003969 + RLTR26 LTR ERVK 1 503 -139 1 1070 662 227 7 7 chrX 63646355 63646497 -103003799 + RLTR26 LTR ERVK 501 642 0 1 1070 333 171 14 0 chrX 63646499 63646569 -103003727 + Lx9 LINE L1 7574 7644 0 1 1070 3696 132 6 0 chrX 63648257 63648888 -103001408 + MusHAL1 LINE L1 1624 2258 -454 1 1070 31712 75 11 2 chrX 63648897 63653997 -102996299 + L1Md_F2 LINE L1 444 5585 -298 1 1070 8001 51 0 2 chrX 63653998 63654983 -102995313 + L1Md_F2 LINE L1 5587 6569 -13 1 1070 15844 108 7 1 chrX 63655031 63658134 -102992162 + L1_Mus1 LINE L1 3446 6567 0 1 1070 1637 21 5 0 chrX 63658336 63658526 -102991770 + B2_Mm1a SINE B2 2 192 -1 1 1070 438 311 106 87 chrX 63658636 63658911 -102991385 + ORR1E LTR MaLR 80 359 0 1 1070 21 0 0 0 chrX 63659158 63659179 -102991117 + AT_rich Low_complexity Low_complexity 1 21 0 1 1070 285 286 12 0 chrX 63659210 63659294 -102991002 + L1MB1 LINE L1 6015 6099 -90 1 1070 383 257 0 9 chrX 63659419 63659529 -102990767 + L1MA10 LINE L1 6176 6284 -50 1 1070 207 0 0 0 chrX 63659674 63659697 -102990599 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1 1070 37022 55 3 8 chrX 63659717 63665894 -102984402 - L1Md_F2 LINE L1 -2 6580 439 1 1070 468 51 0 0 chrX 63666029 63666088 -102984208 + (TTTC)n Simple_repeat Simple_repeat 1 59 0 1 1070 768 186 32 32 chrX 63666127 63666316 -102983980 - Lx3C LINE L1 -20 6956 6768 1 1070 455 349 77 5 chrX 63666380 63666576 -102983720 + L2 LINE L2 1439 1648 -1771 1 1070 420 275 107 27 chrX 63667509 63667696 -102982600 + L2a LINE L2 3216 3417 -9 1 1070 21 0 0 0 chrX 63667915 63667936 -102982360 + AT_rich Low_complexity Low_complexity 1 21 0 1 1070 216 0 0 0 chrX 63667999 63668023 -102982273 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1070 254 133 0 62 chrX 63668963 63669027 -102981269 + (CATATA)n Simple_repeat Simple_repeat 6 65 0 1 1070 7778 62 8 0 chrX 63669727 63670789 -102979507 - L1Md_F2 LINE L1 0 6582 5513 1 1070 367 237 21 0 chrX 63671109 63671206 -102979090 + Lx5 LINE L1 6941 7039 -11 1 1070 450 0 0 0 chrX 63671207 63671257 -102979039 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 1 1070 526 194 98 22 chrX 63671287 63671471 -102978825 - Lx7 LINE L1 -514 7182 6985 1 1070 380 268 9 18 chrX 63671456 63671570 -102978726 + Lx7 LINE L1 7190 7302 -394 1 1070 206 167 21 0 chrX 63671605 63671653 -102978643 + T-rich Low_complexity Low_complexity 4 52 0 1 1070 253 205 24 24 chrX 63671701 63671786 -102978510 + Lx7 LINE L1 7612 7696 0 1 1070 23 33 0 0 chrX 63672224 63672254 -102978042 + AT_rich Low_complexity Low_complexity 1 30 0 1 1070 582 41 0 0 chrX 63672680 63672753 -102977543 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 1070 359 313 74 69 chrX 63672759 63672934 -102977362 + B4A SINE B4 117 292 0 1 1070 213 121 0 0 chrX 63672940 63672973 -102977323 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 1070 247 219 30 37 chrX 63673021 63673108 -102977188 + L1M4 LINE L1 4012 4092 -2048 1 1070 23051 117 24 10 chrX 63673168 63674080 -102976216 - Lx LINE L1 -25 6629 5709 1 1070 282 29 0 0 chrX 63674080 63674115 -102976181 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1 1070 23051 172 13 9 chrX 63674115 63674524 -102975772 - Lx LINE L1 -175 5708 5295 1 1070 2428 34 3 0 chrX 63674524 63674818 -102975478 - L1Md_A LINE L1 -1 6581 6287 1 1070 23051 172 13 9 chrX 63674818 63675731 -102974565 - Lx LINE L1 -589 5294 4404 1 1070 2950 77 5 3 chrX 63675731 63676122 -102974174 + MTA_Mm LTR MaLR 1 392 -4 1 1070 23051 172 13 9 chrX 63676122 63679014 -102971282 - Lx LINE L1 -1480 4403 1477 1 1070 362 316 49 36 chrX 63679089 63679312 -102970984 + L1MCb LINE L1 682 907 -5138 1 1070 293 340 10 30 chrX 63679371 63679471 -102970825 + B1_Mus1 SINE Alu 2 99 -49 1 1070 266 333 24 0 chrX 63680003 63680087 -102970209 - L1MCa LINE L1 -6097 411 326 1 1070 253 227 57 55 chrX 63680216 63680307 -102969989 - MTE2a LTR MaLR -18 361 275 1 1070 30959 105 17 13 chrX 63680410 63684383 -102965913 + L1Md_F2 LINE L1 217 4184 -1699 1 1070 423 0 0 0 chrX 63684383 63684430 -102965866 + (ATATG)n Simple_repeat Simple_repeat 2 48 0 1 1070 30959 87 6 4 chrX 63684430 63685812 -102964484 + L1Md_F2 LINE L1 4185 5584 -299 1 1070 6672 93 29 12 chrX 63685813 63686792 -102963504 + L1Md_F2 LINE L1 5588 6582 0 1 1070 1087 286 20 14 chrX 63686961 63687308 -102962988 + Lx9 LINE L1 7074 7422 -222 1 1070 470 302 54 65 chrX 63687818 63688002 -102962294 + B3A SINE B2 1 182 -16 1 1070 204 200 0 0 chrX 63688002 63688052 -102962244 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1070 28 29 0 0 chrX 63688055 63688090 -102962206 + AT_rich Low_complexity Low_complexity 1 35 0 1 1070 434 324 0 0 chrX 63688954 63689059 -102961237 - RSINE1 SINE B4 -22 143 39 1 1070 843 318 96 9 chrX 63689055 63689398 -102960898 - MTD LTR MaLR -22 397 25 1 1070 388 289 50 14 chrX 63689683 63689826 -102960470 + B1F SINE Alu 1 149 0 1 1070 414 0 0 0 chrX 63689845 63689891 -102960405 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 1070 2669 151 19 15 chrX 63690191 63690655 -102959641 - RMER4A LTR ERVK 0 466 1 2 1070 7879 152 28 13 chrX 63692724 63694093 -102956203 + Lx4B LINE L1 5691 7052 -6 2 1070 240 35 0 0 chrX 63694174 63694203 -102956093 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1070 387 0 0 0 chrX 63694203 63694245 -102956051 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 1070 446 317 7 0 chrX 63694390 63694532 -102955764 + Lx7 LINE L1 7170 7312 -384 2 1070 180 0 0 0 chrX 63694662 63694682 -102955614 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 2 1070 225 276 55 97 chrX 63694732 63694949 -102955347 - RLTR40 LTR ERVK -126 691 484 2 1070 1307 244 47 31 chrX 63695657 63696016 -102954280 - Lx6 LINE L1 -1035 6425 6061 2 1070 2481 236 141 55 chrX 63696037 63696849 -102953447 + Lx6 LINE L1 6448 7318 -142 2 1070 7237 18 4 0 chrX 63696849 63697668 -102952628 - RLTR13B2 LTR ERVK 0 822 1 2 1070 2481 237 48 73 chrX 63697668 63697802 -102952494 + Lx6 LINE L1 7319 7460 0 2 1070 342 304 11 66 chrX 63698182 63698365 -102951931 + L1M2 LINE L1 2110 2282 -3861 2 1070 402 272 13 39 chrX 63698646 63698799 -102951497 - L1M2 LINE L1 -946 5197 5049 2 1070 231 353 0 0 chrX 63698804 63698872 -102951424 - U4 snRNA snRNA -77 68 1 2 1070 924 285 47 29 chrX 63698875 63699320 -102950976 - L1M2 LINE L1 -1096 5047 4595 2 1070 277 276 110 5 chrX 63699316 63699548 -102950748 - L1M2 LINE L1 -1717 4426 4159 2 1070 706 290 88 12 chrX 63699580 63699986 -102950310 + L1MA7 LINE L1 5331 5827 -464 2 1070 695 201 58 0 chrX 63700008 63700162 -102950134 - Lx6 LINE L1 -1 7459 7297 2 1070 339 25 0 0 chrX 63700246 63700286 -102950010 + (GA)n Simple_repeat Simple_repeat 1 40 0 2 133 2743 195 59 4 chrX 63700465 63700994 -102949302 + Lx4B LINE L1 6480 7037 -21 2 1071 896 72 0 8 chrX 63700994 63701120 -102949176 + (GGAA)n Simple_repeat Simple_repeat 1 125 0 2 1071 213 284 0 15 chrX 63701232 63701300 -102948996 + CT-rich Low_complexity Low_complexity 3 69 0 2 1071 842 310 12 12 chrX 63701340 63701582 -102948714 + 7SK RNA RNA 1 242 -89 2 1071 3843 53 20 2 chrX 63701983 63702478 -102947818 - L1Md_A LINE L1 0 6582 6079 2 1071 493 343 14 111 chrX 63702789 63702957 -102947339 - MTEa LTR MaLR -122 257 109 2 1071 711 272 67 98 chrX 63702957 63703113 -102947183 - MTE2a LTR MaLR -2 377 209 2 1071 636 14 0 0 chrX 63703113 63703186 -102947110 + (GAA)n Simple_repeat Simple_repeat 2 74 0 2 1071 711 272 67 98 chrX 63703186 63703416 -102946880 - MTE2a LTR MaLR -171 208 3 2 1071 493 343 14 111 chrX 63703416 63703526 -102946770 - MTEa LTR MaLR -271 108 6 2 1071 1052 123 0 27 chrX 63703885 63704069 -102946227 - Lx2B LINE L1 -3 6997 6819 2 1071 6079 109 43 8 chrX 63704109 63705106 -102945190 + L1VL2 LINE L1 67 1101 -2514 2 1071 35277 36 0 0 chrX 63705107 63710530 -102939766 + L1Md_T LINE L1 71 5589 -297 2 1071 9005 4 0 0 chrX 63710530 63711526 -102938770 + L1Md_T LINE L1 5590 6585 0 2 1071 270 0 0 0 chrX 63711622 63711652 -102938644 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1071 4089 70 132 17 chrX 63711652 63711954 -102938342 + L1VL2 LINE L1 1087 1387 -2228 2 1071 603 0 0 0 chrX 63711954 63712021 -102938275 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 2 1071 4089 70 132 17 chrX 63712021 63712413 -102937883 + L1VL2 LINE L1 1388 1860 -1755 2 1071 1067 299 32 2 chrX 63712415 63712817 -102937479 - L1M2 LINE L1 -2152 3991 3578 2 1071 285 368 56 50 chrX 63713685 63713845 -102936451 + MER63A DNA AcHobo 12 172 -38 2 1071 211 176 0 0 chrX 63713845 63713879 -102936417 + polypyrimidine Low_complexity Low_complexity 3 36 0 2 1071 314 298 73 62 chrX 63714038 63714217 -102936079 + HAL1-3A_ME LINE L1 2307 2487 -371 2 1071 211 98 48 24 chrX 63715100 63715142 -102935154 + T-rich Low_complexity Low_complexity 3 45 0 2 1071 681 13 0 0 chrX 63715214 63715292 -102935004 + (TC)n Simple_repeat Simple_repeat 1 78 0 2 1071 219 152 43 21 chrX 63715477 63715524 -102934772 + (TGAA)n Simple_repeat Simple_repeat 4 51 0 2 1071 541 289 13 0 chrX 63715679 63715831 -102934465 - MER5A DNA MER1_type 0 189 36 2 1071 286 375 6 51 chrX 63715927 63716104 -102934192 - L2c LINE L2 -178 3209 3041 2 1071 219 232 0 0 chrX 63716817 63716873 -102933423 + CT-rich Low_complexity Low_complexity 1 56 0 2 1071 675 144 0 0 chrX 63717323 63717448 -102932848 + (TC)n Simple_repeat Simple_repeat 2 126 0 2 1071 353 317 41 21 chrX 63717689 63717834 -102932462 + MIRc SINE MIR 90 237 -31 2 1071 554 0 15 0 chrX 63719857 63719923 -102930373 + (TA)n Simple_repeat Simple_repeat 2 68 0 2 1071 240 279 33 0 chrX 63720646 63720707 -102929589 - MIRc SINE MIR -146 122 60 2 1071 394 276 142 0 chrX 63722072 63722199 -102928097 + MER3 DNA MER1_type 22 166 -43 2 1071 196 314 42 28 chrX 63724176 63724248 -102926048 + L2 LINE L2 1619 1691 -1728 2 1071 1805 329 53 38 chrX 63724381 63725499 -102924797 - Lx8 LINE L1 -17 7456 6322 2 1071 35 0 0 0 chrX 63725571 63725606 -102924690 + AT_rich Low_complexity Low_complexity 1 35 0 2 1071 10718 56 6 0 chrX 63725777 63727900 -102922396 - L1Md_F3 LINE L1 -20 6564 4429 2 1071 33852 70 5 6 chrX 63727902 63734066 -102916230 - L1Md_F2 LINE L1 -1 6581 469 2 1071 614 148 9 0 chrX 63734124 63734239 -102916057 + (TA)n Simple_repeat Simple_repeat 2 117 0 2 1071 221 234 0 0 chrX 63734546 63734593 -102915703 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1071 270 81 0 0 chrX 63734602 63734639 -102915657 + (GGGA)n Simple_repeat Simple_repeat 3 39 0 2 1071 20245 171 9 60 chrX 63737174 63743605 -102906691 - L1_Mus4 LINE L1 -1 6635 545 2 1071 1868 84 0 0 chrX 63743628 63743892 -102906404 - L1_Mus2 LINE L1 -1 6653 6308 2 1071 6260 113 22 7 chrX 63743904 63744908 -102905388 - Lx3A LINE L1 -193 6788 5770 2 1071 5089 107 52 0 chrX 63744904 63745714 -102904582 + Lx3A LINE L1 4914 5765 -121 2 1071 1594 213 60 14 chrX 63745716 63746064 -102904232 + MTD LTR MaLR 56 419 0 2 1071 1927 262 141 24 chrX 63746064 63746646 -102903650 + MTD-int LTR MaLR 1 650 -608 2 1071 34786 91 2 25 chrX 63746707 63754057 -102896239 + L1Md_T LINE L1 99 5586 -297 2 1071 8026 57 0 0 chrX 63754057 63755053 -102895243 + L1Md_T LINE L1 5587 6582 0 2 1071 333 0 0 0 chrX 63755097 63755134 -102895162 + (A)n Simple_repeat Simple_repeat 1 37 0 2 1071 1104 269 18 24 chrX 63755165 63755497 -102894799 + MYSERV-int LTR ERVK 4798 5127 -1423 2 1071 522 302 10 52 chrX 63755498 63755690 -102894606 + RMER4A LTR ERVK 253 436 -30 2 1071 3290 208 62 20 chrX 63755692 63756581 -102893715 + MYSERV-int LTR ERVK 5305 6230 -320 2 1071 2393 112 13 0 chrX 63756581 63756965 -102893331 + L1_Mm LINE L1 4825 5213 -670 2 1071 206 333 0 0 chrX 63757449 63757509 -102892787 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 1071 535 285 155 12 chrX 63758029 63758281 -102892015 + B4A SINE B4 1 288 -4 2 1071 223 296 14 0 chrX 63758374 63758445 -102891851 + (TAAA)n Simple_repeat Simple_repeat 3 74 0 2 1071 576 29 0 0 chrX 63758446 63758516 -102891780 + (TAGA)n Simple_repeat Simple_repeat 2 71 0 2 1071 189 358 88 56 chrX 63759782 63759998 -102890298 + L2 LINE L2 2629 2851 -568 2 1071 1403 232 55 4 chrX 63760114 63760489 -102889807 - Lx4A LINE L1 -1308 5750 5357 2 1071 479 364 99 31 chrX 63760756 63761178 -102889118 + MLT1C LTR MaLR 1 451 -16 2 1071 28 0 0 0 chrX 63761240 63761268 -102889028 + AT_rich Low_complexity Low_complexity 1 28 0 2 1071 473 252 18 18 chrX 63761269 63761378 -102888918 + RMER20A LTR ERVK 31 139 -377 2 1071 540 250 32 70 chrX 63761377 63761562 -102888734 + RMER20A LTR ERVK 299 476 -40 2 1071 227 383 1 0 chrX 63762271 63762363 -102887933 - MIR SINE MIR -96 112 23 2 1071 6938 79 15 7 chrX 63763668 63764943 -102885353 - L1Md_F2 LINE L1 -13 6569 5288 2 1071 2946 69 3 0 chrX 63765100 63765479 -102884817 - L1_Mus1 LINE L1 -5 6562 6183 2 1071 267 297 108 4 chrX 63765507 63765747 -102884549 + L1MC3 LINE L1 5774 6038 -1747 2 1071 965 286 84 10 chrX 63765901 63766212 -102884084 - L2 LINE L2 -584 2835 2502 2 1071 249 258 281 7 chrX 63766353 63766501 -102883795 - MIRm SINE MIR -11 251 71 2 1071 200 250 0 0 chrX 63766551 63766599 -102883697 + MIRc SINE MIR 88 135 -133 2 1071 225 331 40 86 chrX 63766943 63767095 -102883201 - MIRb SINE MIR 0 268 124 2 1071 250 298 35 12 chrX 63767331 63767416 -102882880 + LTR55 LTR ERV 161 247 -301 2 1071 213 328 17 0 chrX 63767660 63767718 -102882578 + L2b LINE L2 3301 3359 -16 2 1071 270 298 36 33 chrX 63767773 63767883 -102882413 + MIRm SINE MIR 72 185 -91 2 1071 414 0 0 0 chrX 63768561 63768607 -102881689 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1071 237 372 32 32 chrX 63769514 63769703 -102880593 + MIRb SINE MIR 49 237 -31 2 1071 1892 141 10 16 chrX 63769840 63770151 -102880145 + Lx4A LINE L1 6750 7058 0 2 1071 2120 251 50 22 chrX 63770877 63771456 -102878840 + Lx6 LINE L1 6866 7460 0 2 1071 405 330 0 0 chrX 63771644 63771744 -102878552 + PB1D10 SINE Alu 9 108 -9 2 1071 383 193 7 56 chrX 63771935 63772078 -102878218 + Lx9 LINE L1 7507 7642 -2 2 1071 821 271 66 58 chrX 63772141 63772701 -102877595 + Lx7 LINE L1 5309 5902 -1794 2 1071 574 258 14 7 chrX 63772972 63773125 -102877171 + B3A SINE B2 1 158 -37 2 1071 363 23 0 0 chrX 63773149 63773193 -102877103 + (CATA)n Simple_repeat Simple_repeat 1 44 0 2 1071 190 298 53 0 chrX 63773722 63773779 -102876517 - L2 LINE L2 -528 2891 2832 2 1071 244 107 35 35 chrX 63773916 63773974 -102876322 + (CAGAGA)n Simple_repeat Simple_repeat 1 58 0 2 1071 285 345 0 58 chrX 63774143 63774263 -102876033 - MIRb SINE MIR -93 175 63 2 1071 656 83 10 0 chrX 63775628 63775724 -102874572 + (TC)n Simple_repeat Simple_repeat 2 98 0 2 1071 724 254 26 42 chrX 63776352 63776543 -102873753 + B3 SINE B2 13 195 0 2 1071 2926 93 30 2 chrX 63776572 63777005 -102873291 - L1_Mus3 LINE L1 0 6638 6194 2 1071 426 333 19 19 chrX 63777158 63777265 -102873031 + RSINE1 SINE B4 50 156 -9 2 1071 315 85 0 0 chrX 63777273 63777320 -102872976 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1071 833 152 92 0 chrX 63777462 63777626 -102872670 + Lx3C LINE L1 6784 6962 -14 2 1071 207 167 0 0 chrX 63779086 63779128 -102871168 + (TCCA)n Simple_repeat Simple_repeat 3 44 0 2 1071 226 325 73 17 chrX 63779471 63779605 -102870691 - MIRc SINE MIR -111 165 19 3 1071 195 286 0 0 chrX 63780499 63780548 -102869748 - MIRc SINE MIR -137 131 83 3 1071 226 239 0 0 chrX 63780865 63780911 -102869385 + L1_Mur3 LINE L1 5367 5412 -468 3 1071 230 293 196 44 chrX 63780925 63781196 -102869100 + L1_Mur3 LINE L1 74 385 -7327 3 1071 1871 158 5 62 chrX 63781215 63781470 -102868826 + L1_Mur3 LINE L1 4162 4399 -1481 3 1071 3241 45 0 5 chrX 63781470 63781868 -102868428 - MTA_Mm LTR MaLR 0 396 1 3 1071 1871 158 5 62 chrX 63781868 63782018 -102868278 + L1_Mur3 LINE L1 4400 4544 -1336 3 1071 233 167 0 77 chrX 63782016 63782081 -102868215 + Lx6 LINE L1 7401 7460 0 3 1071 1201 231 71 37 chrX 63782097 63782448 -102867848 + RLTR40 LTR ERVK 357 719 -98 3 1071 1228 273 10 61 chrX 63782503 63782913 -102867383 + Lx8 LINE L1 5395 5783 -64 3 1071 333 0 0 0 chrX 63782914 63782951 -102867345 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 3 1071 1132 68 0 7 chrX 63783298 63783447 -102866849 + B1_Mus1 SINE Alu 1 148 0 3 1071 2340 121 45 32 chrX 63783480 63783881 -102866415 + RLTR9E LTR ERVK 4 409 0 3 1071 327 320 69 38 chrX 63783881 63784040 -102866256 + Lx8 LINE L1 6206 6369 -1104 3 1071 379 258 16 16 chrX 63784990 63785116 -102865180 - Lx9 LINE L1 -14 7630 7505 3 1071 311 96 19 0 chrX 63785118 63785170 -102865126 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 1071 726 89 0 51 chrX 63785170 63785288 -102865008 + RLTR9E LTR ERVK 5 116 -293 3 1071 414 0 0 0 chrX 63785291 63785337 -102864959 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1071 372 215 140 0 chrX 63785349 63785442 -102864854 - Lx9 LINE L1 -220 7424 7319 3 1071 850 73 15 0 chrX 63785442 63785578 -102864718 + (TG)n Simple_repeat Simple_repeat 1 138 0 3 1071 1269 217 52 48 chrX 63785616 63785907 -102864389 + ORR1D1 LTR MaLR 18 309 -65 3 1071 1835 230 124 14 chrX 63785887 63786332 -102863964 + ORR1D1-int LTR MaLR 870 1363 -7 3 1071 1240 261 73 17 chrX 63786338 63786692 -102863604 + ORR1D1 LTR MaLR 1 374 0 3 1071 1729 51 0 0 chrX 63787075 63787290 -102863006 + L1Md_T LINE L1 6368 6582 0 3 1071 28503 67 7 1 chrX 63787306 63791779 -102858517 + L1Md_A LINE L1 440 4891 -992 3 1071 1431 18 0 0 chrX 63791776 63791941 -102858355 - L1_Mm LINE L1 -2052 3831 3667 3 1071 225 0 0 0 chrX 63791950 63791975 -102858321 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1071 2535 159 17 4 chrX 63791978 63792458 -102857838 + L1_Mur1 LINE L1 2066 2551 -3335 3 1071 2114 223 71 10 chrX 63792487 63792994 -102857302 + Lx2B LINE L1 6457 6994 -6 3 1071 345 296 10 0 chrX 63793103 63793201 -102857095 - Lx8 LINE L1 -797 6676 6578 3 1071 298 263 90 10 chrX 63793210 63793310 -102856986 + Lx8 LINE L1 7105 7212 -261 3 1071 1585 230 73 6 chrX 63793328 63793682 -102856614 + MTD LTR MaLR 28 405 -14 3 1071 252 293 78 90 chrX 63793740 63793984 -102856312 + Lx8 LINE L1 7231 7471 -2 3 1071 4357 152 1 0 chrX 63793988 63794706 -102855590 + L1_Mm LINE L1 4854 5572 -311 3 1071 2358 172 66 0 chrX 63794697 63795121 -102855175 + L1Md_F LINE L1 313 764 -5755 3 1071 7278 67 15 2 chrX 63795122 63796709 -102853587 + L1Md_F2 LINE L1 4944 6549 -33 3 1071 381 275 8 8 chrX 63796841 63796962 -102853334 + L1MA6 LINE L1 4511 4631 -1512 3 1071 633 252 82 16 chrX 63796976 63797279 -102853017 + L1MA6 LINE L1 4978 5300 -843 3 1071 303 268 0 0 chrX 63797368 63797450 -102852846 + L1MA6 LINE L1 5495 5576 -724 3 1071 780 252 35 4 chrX 63797492 63797751 -102852545 + L1MA6 LINE L1 5755 6021 -270 3 1071 24 53 0 0 chrX 63797924 63797962 -102852334 + AT_rich Low_complexity Low_complexity 1 38 0 3 1071 22 0 0 0 chrX 63798608 63798630 -102851666 + AT_rich Low_complexity Low_complexity 1 22 0 3 1071 791 213 17 28 chrX 63798958 63799137 -102851159 - RMER12 LTR ERVK 0 1322 1146 3 1071 636 247 207 25 chrX 63799354 63799591 -102850705 - RMER12 LTR ERVK -85 1237 958 3 1071 393 22 0 0 chrX 63799610 63799656 -102850640 + (TGGA)n Simple_repeat Simple_repeat 1 46 0 3 1071 1517 125 58 7 chrX 63799701 63799975 -102850321 - RMER12 LTR ERVK -605 717 430 3 1071 1111 224 19 49 chrX 63799969 63800232 -102850064 - RMER12 LTR ERVK -1039 283 29 3 1071 1116 58 0 0 chrX 63800494 63800631 -102849665 + B1_Mus1 SINE Alu 1 137 -11 3 1071 1146 88 0 0 chrX 63800632 63800792 -102849504 + (GAAA)n Simple_repeat Simple_repeat 1 160 0 3 1071 182 91 30 0 chrX 63800880 63800913 -102849383 + (TTA)n Simple_repeat Simple_repeat 3 36 0 3 1071 5365 10 0 0 chrX 63800920 63801519 -102848777 - L1Md_T LINE L1 0 6582 5984 3 1071 886 281 0 0 chrX 63802001 63802193 -102848103 + B3 SINE B2 13 204 -12 3 1071 627 333 53 50 chrX 63802467 63802729 -102847567 + ORR1E LTR MaLR 97 359 0 3 1071 3839 282 61 63 chrX 63802728 63803978 -102846318 + ORR1E-int LTR MaLR 3 1203 -167 3 1071 5664 50 8 24 chrX 63803978 63804719 -102845577 - L1Md_F2 LINE L1 -3 6579 5851 3 1071 3839 278 61 65 chrX 63804719 63804879 -102845417 + ORR1E-int LTR MaLR 1204 1369 -1 3 1071 1102 302 37 52 chrX 63804879 63805224 -102845072 + ORR1E LTR MaLR 15 354 -5 3 1071 621 341 58 95 chrX 63805884 63806296 -102844000 + MLT1I LTR MaLR 7 403 -8 3 1071 180 0 0 0 chrX 63807196 63807216 -102843080 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1071 288 370 64 46 chrX 63807416 63807742 -102842554 - L2c LINE L2 -41 3346 3015 3 1071 346 408 62 10 chrX 63808004 63808212 -102842084 + MIRb SINE MIR 5 223 -45 3 1071 319 338 68 20 chrX 63808212 63808360 -102841936 + MIRb SINE MIR 30 184 -84 3 1071 578 353 64 41 chrX 63809327 63809593 -102840703 + B4A SINE B4 3 274 -18 3 1071 318 50 0 0 chrX 63809654 63809694 -102840602 + (CAT)n Simple_repeat Simple_repeat 2 41 0 3 1071 317 297 75 19 chrX 63810100 63810261 -102840035 - L1ME1 LINE L1 0 6179 6010 3 1071 210 239 10 42 chrX 63810777 63810910 -102839386 + (TATATG)n Simple_repeat Simple_repeat 1 128 0 3 1071 213 159 0 0 chrX 63810911 63810955 -102839341 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1071 5180 57 8 0 chrX 63810979 63811713 -102838583 - L1Md_F2 LINE L1 -613 5969 5232 3 1071 4743 62 0 3 chrX 63811713 63812323 -102837973 + L1Md_F2 LINE L1 5963 6570 -12 3 1071 815 280 127 55 chrX 63812516 63813227 -102837069 - L1MC4 LINE L1 -287 7755 6994 3 1071 450 0 0 0 chrX 63813233 63813283 -102837013 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 3 1071 235 192 19 19 chrX 63813353 63813406 -102836890 - MLT2C1 LTR ERVL -4 559 507 3 1071 428 48 0 31 chrX 63813432 63813496 -102836800 + (GGAGA)n Simple_repeat Simple_repeat 3 64 0 3 1071 280 301 9 37 chrX 63813496 63813544 -102836752 + polypurine Low_complexity Low_complexity 3 49 0 3 1071 1985 166 10 31 chrX 63813544 63813930 -102836366 + ORR1C1 LTR MaLR 1 378 0 3 1071 280 301 9 37 chrX 63813930 63813988 -102836308 + polypurine Low_complexity Low_complexity 50 106 0 3 1071 376 236 8 39 chrX 63814137 63814158 -102836138 - L1M3 LINE L1 -729 5442 5422 3 1071 3110 54 29 0 chrX 63814158 63814567 -102835729 + BGLII LTR ERVK 1 421 0 3 1071 376 236 8 39 chrX 63814567 63814673 -102835623 - L1M3 LINE L1 -750 5421 5319 3 1071 801 271 12 6 chrX 63814688 63814859 -102835437 - B3 SINE B2 -8 208 37 3 1071 435 302 8 23 chrX 63814927 63815056 -102835240 - ID_B1 SINE B4 0 224 98 3 1071 301 284 59 7 chrX 63815088 63815223 -102835073 - L1M3 LINE L1 -859 5281 5140 3 1071 248 294 8 112 chrX 63815591 63815725 -102834571 - L1M3 LINE L1 -1201 4942 4823 3 1071 406 333 20 0 chrX 63815721 63815922 -102834374 - L1M3 LINE L1 -1542 4598 4394 3 1071 1005 289 26 26 chrX 63815925 63816198 -102834098 + B4 SINE B4 6 278 -14 3 1071 393 144 252 16 chrX 63816306 63816433 -102833863 - Lx9 LINE L1 -1 7643 7487 3 1071 180 111 0 0 chrX 63816644 63816671 -102833625 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1071 1058 165 10 67 chrX 63816783 63817046 -102833250 - ORR1B1 LTR MaLR -139 255 1 3 1071 1551 148 180 19 chrX 63817071 63817387 -102832909 - ORR1B2 LTR MaLR 0 367 1 3 1071 630 287 12 12 chrX 63817818 63817987 -102832309 - MER5A DNA MER1_type -1 188 20 3 1071 806 244 68 0 chrX 63818125 63818318 -102831978 + ID_B1 SINE B4 5 219 -73 3 1071 2629 48 18 0 chrX 63818417 63818747 -102831549 - L1Md_A LINE L1 -1 6581 6246 3 1071 187 330 102 41 chrX 63818757 63818855 -102831441 - L4 LINE RTE -460 1569 1466 3 1071 426 219 79 68 chrX 63818896 63819028 -102831268 + L1_Mur1 LINE L1 206 319 -6665 3 1071 12987 121 132 3 chrX 63819023 63821679 -102828617 + L1_Mur1 LINE L1 886 3883 -2003 3 1071 5464 17 0 0 chrX 63821673 63822304 -102827992 + L1Md_T LINE L1 4956 5586 -297 3 1071 8961 7 0 0 chrX 63822304 63823300 -102826996 + L1Md_T LINE L1 5587 6582 0 3 1071 4933 84 52 7 chrX 63823309 63824056 -102826240 + L1_Mur1 LINE L1 3886 4666 -1220 3 1071 11236 72 0 6 chrX 63824054 63826228 -102824068 - L1Md_F2 LINE L1 0 6582 4427 3 1071 7649 46 0 1 chrX 63826229 63827152 -102823144 - L1Md_F2 LINE L1 0 6582 5661 3 1071 527 260 26 29 chrX 63827565 63827722 -102822574 - ORR1D1 LTR MaLR -4 375 224 3 1071 2228 181 82 0 chrX 63827722 63828125 -102822171 + RLTR21 LTR ERVK 1 436 -1136 3 1071 1202 124 5 65 chrX 63828132 63828347 -102821949 - Lx2 LINE L1 -18 6979 6778 3 1071 4805 142 18 3 chrX 63828344 63829114 -102821182 - Lx2 LINE L1 -348 6649 5868 3 1071 5630 148 18 110 chrX 63829114 63829857 -102820439 + RLTR21 LTR ERVK 472 1130 -442 3 1071 180 77 0 0 chrX 63829857 63829883 -102820413 + (TATG)n Simple_repeat Simple_repeat 1 26 0 3 1071 5630 148 18 110 chrX 63829883 63830057 -102820239 + RLTR21 LTR ERVK 1131 1289 -283 3 1071 264 30 0 0 chrX 63830057 63830090 -102820206 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1071 5630 148 18 110 chrX 63830090 63830383 -102819913 + RLTR21 LTR ERVK 1290 1572 0 3 1071 821 237 68 18 chrX 63830383 63830575 -102819721 - ORR1D1 LTR MaLR -171 203 1 3 1071 449 279 13 93 chrX 63830759 63830909 -102819387 + B3A SINE B2 61 198 0 3 1071 198 0 0 0 chrX 63830922 63830944 -102819352 + (TA)n Simple_repeat Simple_repeat 1 22 0 3 1071 249 201 0 3 chrX 63830944 63830991 -102819305 - PB1 SINE Alu -87 62 17 3 1071 21 0 0 0 chrX 63830995 63831016 -102819280 + AT_rich Low_complexity Low_complexity 1 21 0 3 1071 569 217 21 0 chrX 63831466 63831609 -102818687 - Lx5 LINE L1 -8 7042 6897 3 1071 396 0 0 0 chrX 63831616 63831660 -102818636 + (TTATA)n Simple_repeat Simple_repeat 4 47 0 3 133 2057 266 170 8 chrX 63831660 63832547 -102817749 - Lx6 LINE L1 -157 7303 6144 3 1072 287 203 141 0 chrX 63832549 63832613 -102817683 + 4.5SRNA scRNA scRNA 6 78 -16 3 1072 683 239 87 104 chrX 63833891 63834244 -102816052 - RMER12 LTR ERVK -144 1178 987 3 1072 29668 129 13 29 chrX 63834288 63838662 -102811634 + L1_Mus2 LINE L1 409 4735 -1148 3 1072 4444 33 56 2 chrX 63838662 63839216 -102811080 + L1Md_F2 LINE L1 5985 6568 -14 3 1072 29668 98 8 7 chrX 63839216 63841063 -102809233 + L1_Mus2 LINE L1 4736 6566 0 3 1072 6288 147 23 2 chrX 63841094 63842564 -102807732 + Lx LINE L1 5153 6649 -5 3 1072 514 250 0 9 chrX 63842630 63842739 -102807557 - RMER12 LTR ERVK -414 908 801 3 1072 1079 136 28 0 chrX 63842740 63842916 -102807380 + B2_Mm2 SINE B2 2 182 -13 3 1072 357 90 351 99 chrX 63842964 63843075 -102807221 + B2_Mm2 SINE B2 48 186 -9 3 1072 3901 174 47 26 chrX 63843021 63843109 -102807187 - RMER12 LTR ERVK -473 849 769 3 1072 279 0 0 0 chrX 63843109 63843140 -102807156 + (TGGA)n Simple_repeat Simple_repeat 1 31 0 3 1072 3901 174 47 26 chrX 63843140 63843883 -102806413 - RMER12 LTR ERVK -554 768 2 3 1072 186 209 0 0 chrX 63844135 63844178 -102806118 + T-rich Low_complexity Low_complexity 1 43 0 3 1072 527 326 103 30 chrX 63845914 63846382 -102803914 - L1M3 LINE L1 -1607 4533 4032 4 1072 1011 286 204 5 chrX 63846445 63847082 -102803214 + L1MA7 LINE L1 4640 5401 -890 4 1072 2670 18 2 251 chrX 63847082 63847601 -102802695 + RLTR10 LTR ERVK 1 390 0 4 1072 1011 291 106 37 chrX 63847601 63847896 -102802400 + L1MA7 LINE L1 5402 5741 -550 4 1072 2005 65 25 0 chrX 63847896 63848171 -102802125 - L1Md_F2 LINE L1 -3 6579 6298 4 1072 1011 291 106 37 chrX 63848171 63848306 -102801990 + L1MA7 LINE L1 5742 5873 -418 4 1072 3224 33 8 0 chrX 63848306 63848698 -102801598 + L1Md_F3 LINE L1 6176 6570 -14 4 1072 1011 291 106 37 chrX 63848698 63849048 -102801248 + L1MA7 LINE L1 5874 6235 -56 4 1072 702 280 104 96 chrX 63850304 63850912 -102799384 - RLTR18B LTR ERVK -24 592 27 4 1072 13335 166 51 23 chrX 63850926 63850975 -102799321 + L1_Mur3 LINE L1 2953 2993 -2887 4 1072 195 42 0 0 chrX 63850975 63850999 -102799297 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 1072 13335 166 51 23 chrX 63850999 63851104 -102799192 + L1_Mur3 LINE L1 2994 3092 -2788 4 1072 207 0 0 0 chrX 63851104 63851127 -102799169 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1072 13335 166 51 23 chrX 63851127 63851666 -102798630 + L1_Mur3 LINE L1 3093 3668 -2212 4 1072 276 53 0 0 chrX 63851666 63851704 -102798592 + (CAGA)n Simple_repeat Simple_repeat 3 40 0 4 1072 13335 166 51 23 chrX 63851704 63853828 -102796468 + L1_Mur3 LINE L1 3669 5851 -29 4 1072 410 75 0 0 chrX 63853828 63853881 -102796415 - B2_Mm2 SINE B2 -112 83 31 4 1072 5476 77 2 1 chrX 63853881 63854688 -102795608 - L1_Mus2 LINE L1 -629 5937 5129 4 1072 287 302 50 39 chrX 63855456 63855579 -102794717 - B1F1 SINE Alu -21 128 8 4 1072 359 211 219 0 chrX 63855979 63856102 -102794194 - L1MB1 LINE L1 -6 6162 6013 4 1072 1337 212 62 44 chrX 63856159 63856548 -102793748 + Lx9 LINE L1 7242 7637 -7 4 1072 261 0 0 0 chrX 63856680 63856709 -102793587 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 4 1072 773 165 15 212 chrX 63856787 63857056 -102793240 - Lx6 LINE L1 -526 6934 6719 4 1072 425 205 26 0 chrX 63857056 63857134 -102793162 + B1_Mur2 SINE Alu 13 92 -57 4 1072 1821 219 0 19 chrX 63857160 63857519 -102792777 + MTD LTR MaLR 68 419 0 4 1072 860 316 65 14 chrX 63857575 63858224 -102792072 + L1M3 LINE L1 2416 3097 -3043 4 1072 190 0 67 0 chrX 63858575 63858605 -102791691 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4 1072 372 213 42 151 chrX 63858653 63858819 -102791477 + B1F SINE Alu 1 148 -1 4 1072 519 256 120 0 chrX 63858825 63858950 -102791346 + RSINE1 SINE B4 4 143 -22 4 1072 28 21 0 40 chrX 63858988 63859014 -102791282 + AT_rich Low_complexity Low_complexity 1 25 0 4 1072 865 182 0 0 chrX 63859014 63859162 -102791134 - B1_Mur4 SINE Alu -2 148 1 4 1072 28 21 0 40 chrX 63859162 63859185 -102791111 + AT_rich Low_complexity Low_complexity 1 23 0 4 1072 743 259 71 24 chrX 63859303 63859600 -102790696 + L1M1 LINE L1 5463 5773 -527 4 1072 423 0 0 0 chrX 63859614 63859661 -102790635 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1072 422 247 113 0 chrX 63859700 63859850 -102790446 - L1MA4 LINE L1 -364 5936 5770 4 1072 216 97 0 0 chrX 63859850 63859881 -102790415 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 4 1072 23 33 0 0 chrX 63860647 63860677 -102789619 + AT_rich Low_complexity Low_complexity 1 30 0 4 1072 312 372 68 10 chrX 63860736 63860839 -102789457 - RSINE1 SINE B4 -13 152 44 4 1072 689 264 76 16 chrX 63860978 63861163 -102789133 + ID_B1 SINE B4 3 198 -26 4 1072 297 0 0 0 chrX 63861501 63861534 -102788762 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1072 387 92 0 0 chrX 63861534 63861599 -102788697 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 1072 38449 6 0 0 chrX 63861811 63867397 -102782899 + L1Md_A LINE L1 1 5586 -297 4 1072 8997 3 0 0 chrX 63867397 63868424 -102781872 + L1Md_A LINE L1 5587 6582 0 4 1072 206 81 27 0 chrX 63868447 63868484 -102781812 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1072 516 16 0 0 chrX 63868542 63868603 -102781693 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1072 3896 52 6 0 chrX 63869031 63869516 -102780780 + L1Md_F2 LINE L1 6092 6579 -3 4 1072 421 359 108 29 chrX 63870579 63870857 -102779439 + MLT1L LTR MaLR 9 308 -302 4 1072 459 0 0 0 chrX 63871173 63871224 -102779072 + (TA)n Simple_repeat Simple_repeat 2 52 0 4 1072 3128 126 27 81 chrX 63871546 63872304 -102777992 - RMER12B LTR ERVK -17 1387 730 4 1072 2680 97 0 11 chrX 63872303 63872679 -102777617 - RMER12B LTR ERVK -1032 372 1 4 1072 1063 128 117 0 chrX 63872910 63873098 -102777198 + URR1B DNA MER1_type 6 215 -10 4 1072 594 376 73 17 chrX 63873340 63873694 -102776602 + MLT1J2 LTR MaLR 36 409 -39 4 1072 903 265 15 5 chrX 63873903 63874100 -102776196 + B3 SINE B2 11 209 -7 4 1072 210 219 24 0 chrX 63874331 63874372 -102775924 - B4 SINE B4 -237 55 14 4 1072 426 207 22 79 chrX 63874397 63874536 -102775760 - L1MA7 LINE L1 -198 6102 5963 4 1072 260 44 13 0 chrX 63874904 63874959 -102775337 - Lx LINE L1 -5 6649 6576 4 1072 1036 291 4 4 chrX 63875210 63875452 -102774844 + MTD LTR MaLR 11 252 -167 4 1072 646 220 132 140 chrX 63875492 63875735 -102774561 - MTEb LTR MaLR -136 243 3 4 1072 356 55 18 0 chrX 63875854 63875909 -102774387 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1072 1018 355 25 100 chrX 63877136 63877828 -102772468 + MLT1E LTR MaLR 41 680 0 4 1072 727 316 39 117 chrX 63877939 63878247 -102772049 + B4A SINE B4 3 286 -6 4 1072 333 0 0 0 chrX 63878270 63878307 -102771989 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1072 297 0 0 0 chrX 63878307 63878339 -102771957 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 1072 338 284 75 58 chrX 63878485 63878623 -102771673 + MER3 DNA MER1_type 1 130 -79 4 1072 1769 307 48 18 chrX 63878927 63879587 -102770709 + Lx8 LINE L1 6651 7330 -143 4 1072 267 230 47 47 chrX 63879620 63879748 -102770548 + RMER1B Other Other 935 1062 -4 4 1072 8083 114 22 29 chrX 63880023 63881320 -102768976 + Lx3A LINE L1 5689 6975 -6 4 1072 774 105 0 0 chrX 63881324 63881438 -102768858 + (GGAA)n Simple_repeat Simple_repeat 2 115 0 4 1072 251 321 0 47 chrX 63882098 63882183 -102768113 - ID4_ SINE ID -2 81 1 4 1072 951 9 0 0 chrX 63882454 63882562 -102767734 + (GAA)n Simple_repeat Simple_repeat 2 109 0 4 1072 26 93 0 0 chrX 63883074 63883149 -102767147 + AT_rich Low_complexity Low_complexity 1 75 0 4 1072 281 262 37 12 chrX 63883734 63883815 -102766481 + B1F SINE Alu 1 83 -66 4 1072 332 73 36 0 chrX 63883878 63883933 -102766363 + (CAAAA)n Simple_repeat Simple_repeat 4 60 0 4 1072 1167 75 0 0 chrX 63883935 63884082 -102766214 + B1_Mus1 SINE Alu 2 148 0 4 1072 22 0 0 0 chrX 63884575 63884597 -102765699 + AT_rich Low_complexity Low_complexity 1 22 0 4 1072 378 0 0 0 chrX 63884625 63884667 -102765629 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1072 25 0 0 0 chrX 63884972 63884997 -102765299 + AT_rich Low_complexity Low_complexity 1 25 0 4 1072 226 202 0 87 chrX 63885227 63885319 -102764977 - Lx9 LINE L1 -87 7557 7474 4 1072 647 292 49 59 chrX 63885319 63885523 -102764773 + B4 SINE B4 85 286 -6 4 1072 407 68 17 0 chrX 63885538 63885597 -102764699 + (CCA)n Simple_repeat Simple_repeat 3 62 0 4 1072 252 0 0 0 chrX 63885597 63885625 -102764671 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1072 387 256 68 6 chrX 63885686 63885863 -102764433 - RMER17C LTR ERVK -136 274 87 4 1072 258 395 28 44 chrX 63886000 63886180 -102764116 - MLT1J LTR MaLR -267 245 69 4 1072 532 251 109 0 chrX 63886194 63886369 -102763927 + Lx9 LINE L1 7271 7464 -180 4 1072 1050 52 81 0 chrX 63886492 63886628 -102763668 + B1_Mus1 SINE Alu 2 148 0 4 1072 4888 60 3 6 chrX 63886661 63887296 -102763000 + L1Md_F2 LINE L1 5948 6580 -2 4 1072 210 91 0 0 chrX 63887669 63887702 -102762594 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 1072 194 315 88 18 chrX 63888353 63888466 -102761830 - MIRb SINE MIR -31 237 117 4 1072 5590 33 5 3 chrX 63888524 63889193 -102761103 - L1Md_F2 LINE L1 0 6582 5913 4 1072 230 253 111 25 chrX 63890272 63890353 -102759943 + MIR3 SINE MIR 78 165 -43 4 1072 720 269 58 31 chrX 63890593 63890819 -102759477 + L1_Rod LINE L1 492 723 -6885 4 1072 1096 160 8 109 chrX 63890819 63891015 -102759281 + ORR1A2 LTR MaLR 127 329 -55 4 1072 3699 69 0 4 chrX 63891015 63891496 -102758800 + L1_Mus2 LINE L1 6088 6566 0 4 1072 1096 140 5 107 chrX 63891496 63891560 -102758736 + ORR1A2 LTR MaLR 273 327 0 4 1072 401 225 0 0 chrX 63891560 63891640 -102758656 - Lx5 LINE L1 -407 6643 6564 4 1072 1730 199 39 44 chrX 63891694 63892280 -102758016 + RMER1B Other Other 439 1054 -12 4 1072 562 176 92 0 chrX 63892299 63892418 -102757878 + L1_Rod LINE L1 1184 1313 -6295 4 1072 869 237 48 111 chrX 63892442 63892925 -102757371 - RLTR11B LTR ERVK -55 473 1 4 1072 501 194 24 0 chrX 63892925 63893049 -102757247 + L1_Rod LINE L1 1308 1434 -4413 4 1072 438 53 0 0 chrX 63893053 63893110 -102757186 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1072 336 276 0 0 chrX 63893111 63893216 -102757080 + GA-rich Low_complexity Low_complexity 4 108 0 4 1072 1700 183 109 30 chrX 63893221 63893355 -102756941 + L1_Rod LINE L1 1446 1593 -4254 4 1072 207 0 0 0 chrX 63893355 63893378 -102756918 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1072 1700 183 109 30 chrX 63893378 63893683 -102756613 + L1_Rod LINE L1 1594 1919 -3928 4 1072 755 97 13 8 chrX 63893683 63893848 -102756448 - RMER6D LTR ERVK -514 206 2 4 1072 970 232 29 67 chrX 63893852 63894194 -102756102 + L1_Rod LINE L1 2670 2998 -2849 4 1072 5410 236 98 48 chrX 63894192 63895917 -102754379 + Lx9 LINE L1 5833 7644 0 4 1072 245 308 0 49 chrX 63898164 63898246 -102752050 + MER112 DNA MER1_type 7 84 -177 4 1072 1413 261 36 14 chrX 63898472 63898837 -102751459 - MTE2b LTR MaLR -6 373 1 4 1072 703 240 35 35 chrX 63899692 63899891 -102750405 - Lx6 LINE L1 0 7460 7262 4 1072 252 0 0 0 chrX 63900567 63900595 -102749701 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 1072 765 85 0 0 chrX 63901352 63901458 -102748838 + (TTTC)n Simple_repeat Simple_repeat 2 107 0 4 1072 218 364 119 40 chrX 63901973 63902199 -102748097 - L3 LINE CR1 -64 4425 4182 4 1072 202 116 0 44 chrX 63902412 63902457 -102747839 + CT-rich Low_complexity Low_complexity 2 44 0 4 1072 340 222 9 9 chrX 63903722 63903831 -102746465 + CT-rich Low_complexity Low_complexity 1 109 0 4 1072 459 0 0 0 chrX 63905712 63905763 -102744533 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1072 228 135 0 0 chrX 63909905 63909942 -102740354 + (T)n Simple_repeat Simple_repeat 1 37 0 5 1072 333 0 0 0 chrX 63910050 63910087 -102740209 + (T)n Simple_repeat Simple_repeat 1 37 0 5 1072 23 33 0 0 chrX 63910463 63910493 -102739803 + AT_rich Low_complexity Low_complexity 1 30 0 5 1072 240 35 0 0 chrX 63913049 63913078 -102737218 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 5 1072 739 162 81 0 chrX 63914610 63914746 -102735550 - B1_Mur2 SINE Alu -1 148 2 5 1072 25 0 0 0 chrX 63914899 63914924 -102735372 + AT_rich Low_complexity Low_complexity 1 25 0 5 1072 440 116 12 0 chrX 63915313 63915399 -102734897 + (CA)n Simple_repeat Simple_repeat 2 88 0 5 1072 396 0 0 0 chrX 63916057 63916101 -102734195 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1072 227 31 0 30 chrX 63917155 63917188 -102733108 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 5 1072 445 92 13 0 chrX 63918173 63918249 -102732047 + L1Md_F2 LINE L1 6504 6580 -2 5 1072 369 330 65 9 chrX 63918416 63918590 -102731706 + MIRb SINE MIR 5 188 -80 5 1072 27 49 0 0 chrX 63918597 63918638 -102731658 + AT_rich Low_complexity Low_complexity 1 41 0 5 1072 210 256 0 0 chrX 63919292 63919331 -102730965 - B4 SINE B4 -158 134 96 5 1072 8497 37 0 1 chrX 63920480 63921503 -102728793 - L1Md_T LINE L1 0 6582 5591 5 1072 627 240 47 14 chrX 63922055 63922230 -102728066 + B3 SINE B2 16 193 -2 5 1072 404 341 29 49 chrX 63922263 63922507 -102727789 + Lx8 LINE L1 7231 7469 -4 5 1072 28 0 0 0 chrX 63923053 63923081 -102727215 + AT_rich Low_complexity Low_complexity 1 28 0 5 1072 212 371 0 20 chrX 63924862 63924961 -102725335 - L2a LINE L2 -2 3424 3328 5 1072 308 203 16 0 chrX 63925926 63925990 -102724306 + MIR3 SINE MIR 135 199 -9 5 1072 312 284 12 0 chrX 63926253 63926334 -102723962 - ID4_ SINE ID 0 83 2 5 1072 1432 230 238 6 chrX 63926749 63927244 -102723052 + Lx7 LINE L1 6938 7547 -149 5 1072 468 0 0 0 chrX 63927414 63927466 -102722830 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1072 3109 136 36 21 chrX 63927483 63928003 -102722293 + RLTR11A LTR ERVK 1 528 0 5 1072 26 0 0 0 chrX 63928035 63928061 -102722235 + AT_rich Low_complexity Low_complexity 1 26 0 5 1072 1128 61 0 20 chrX 63928200 63928351 -102721945 + B1_Mus1 SINE Alu 1 148 0 5 1072 207 0 0 0 chrX 63928351 63928374 -102721922 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1072 30 27 0 0 chrX 63928458 63928495 -102721801 + AT_rich Low_complexity Low_complexity 1 37 0 5 1072 3070 55 182 2 chrX 63928901 63929335 -102720961 + RLTR1B LTR ERV1 1 512 0 5 1072 659 280 38 24 chrX 63929501 63929713 -102720583 + B3 SINE B2 1 215 -1 5 1072 555 206 62 34 chrX 63931311 63931457 -102718839 - B2_Mm2 SINE B2 -2 193 44 5 1072 1032 59 38 25 chrX 63931483 63931640 -102718656 - L1_Mus2 LINE L1 0 6566 6408 5 1072 2688 215 44 38 chrX 63931745 63932383 -102717913 - RLTR26 LTR ERVK 0 642 1 5 1072 2438 267 32 8 chrX 63932543 63933140 -102717156 + Lx9 LINE L1 6359 6969 -675 5 1072 40 21 0 0 chrX 63933141 63933188 -102717108 + AT_rich Low_complexity Low_complexity 1 47 0 5 1072 1614 248 95 55 chrX 63933219 63933838 -102716458 + Lx9 LINE L1 6979 7622 -22 5 1072 253 288 0 0 chrX 63934101 63934167 -102716129 + L2a LINE L2 3361 3426 0 5 1072 266 330 70 54 chrX 63934226 63934412 -102715884 + MIR3 SINE MIR 16 204 -4 5 1072 328 321 103 27 chrX 63935781 63936005 -102714291 + MIR SINE MIR 20 260 -2 5 1072 357 43 0 0 chrX 63936953 63937000 -102713296 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 5 1072 1163 43 0 0 chrX 63937004 63937142 -102713154 - B1_Mm SINE Alu -7 140 3 5 1072 3119 40 42 0 chrX 63937370 63937750 -102712546 + MTA_Mm LTR MaLR 1 396 0 5 1072 468 48 0 0 chrX 63938684 63938747 -102711549 + (TCTCTG)n Simple_repeat Simple_repeat 4 66 0 5 1072 4662 91 20 71 chrX 63938795 63939126 -102711170 + RMER17A LTR ERVK 1 342 -409 5 1072 834 123 0 0 chrX 63939126 63939256 -102711040 + (TCCCC)n Simple_repeat Simple_repeat 3 132 0 5 1072 4662 91 20 71 chrX 63939256 63939713 -102710583 + RMER17A LTR ERVK 343 749 -2 5 1072 239 146 18 0 chrX 63939759 63939814 -102710482 + GA-rich Low_complexity Low_complexity 2 57 0 5 1072 195 42 0 0 chrX 63939993 63940017 -102710279 + (TGG)n Simple_repeat Simple_repeat 3 26 0 5 1072 386 360 0 9 chrX 63940041 63940156 -102710140 - PB1 SINE Alu -8 119 6 5 1072 423 243 32 87 chrX 63940180 63940365 -102709931 + L1MB4 LINE L1 5964 6139 -32 5 1072 366 207 44 110 chrX 63941207 63941233 -102709063 + MT2B LTR ERVL 129 212 -389 5 1072 654 142 19 6 chrX 63941243 63941365 -102708931 + B1_Mur2 SINE Alu 1 120 0 5 1072 366 207 44 110 chrX 63941332 63941343 -102708953 + MT2B LTR ERVL 213 255 -346 5 1072 358 368 13 40 chrX 63941893 63942043 -102708253 - RSINE1 SINE B4 -17 148 3 5 1072 344 121 155 34 chrX 63942414 63942524 -102707772 - B2_Mm2 SINE B2 -7 188 47 5 1072 1279 80 23 0 chrX 63942537 63942713 -102707583 - B2_Mm2 SINE B2 -14 181 2 5 1072 907 89 60 65 chrX 63943395 63943563 -102706733 - Lx2 LINE L1 -1082 5915 5749 5 1072 6397 106 14 69 chrX 63943560 63944332 -102705964 + Lx2 LINE L1 5946 6724 -273 5 1072 180 0 0 0 chrX 63944332 63944352 -102705944 + (CCCTAA)n Simple_repeat Simple_repeat 2 21 0 5 1072 6397 106 14 69 chrX 63944352 63944692 -102705604 + Lx2 LINE L1 6725 6996 -1 5 1072 1687 131 25 4 chrX 63944913 63945190 -102705106 + RMER6A LTR ERVK 474 756 0 5 1072 21 36 0 0 chrX 63945427 63945455 -102704841 + AT_rich Low_complexity Low_complexity 1 28 0 5 1072 804 307 22 25 chrX 63945958 63946001 -102704295 + MTE2a LTR MaLR 87 133 -246 5 1072 2127 58 4 4 chrX 63946001 63946277 -102704019 - L1_Mus2 LINE L1 0 6566 6291 5 1072 804 307 22 25 chrX 63946277 63946507 -102703789 + MTE2a LTR MaLR 134 358 -21 5 1072 24 32 0 0 chrX 63946507 63946538 -102703758 + AT_rich Low_complexity Low_complexity 1 31 0 5 1072 4407 38 2 8 chrX 63948208 63948744 -102701552 + L1Md_F2 LINE L1 6038 6570 -12 5 1072 854 289 83 35 chrX 63950467 63950757 -102699539 - Lx8 LINE L1 -8 7465 7162 5 1072 549 182 63 9 chrX 63951518 63951629 -102698667 + SSU-rRNA_Hsa rRNA rRNA 1307 1423 -446 5 1072 3995 183 17 51 chrX 63951631 63952456 -102697840 + Lx7 LINE L1 5979 6775 -921 5 1072 525 241 144 25 chrX 63952505 63952748 -102697548 + RLTR10A LTR ERVK 140 411 0 5 1072 3569 242 49 17 chrX 63952748 63953461 -102696835 + Lx7 LINE L1 6768 7493 -203 5 1072 209 30 61 0 chrX 63953461 63953494 -102696802 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1072 3569 242 49 17 chrX 63953494 63953680 -102696616 + Lx7 LINE L1 7494 7696 0 5 1072 867 242 104 4 chrX 63953803 63954044 -102696252 + Lx9 LINE L1 6634 6898 -746 5 1072 2466 52 0 9 chrX 63954044 63954373 -102695923 - IAPEY2_LTR LTR ERVK 0 357 32 5 1072 1561 216 122 17 chrX 63954383 63954959 -102695337 + Lx9 LINE L1 6893 7614 -30 5 1072 4305 71 0 5 chrX 63954931 63955501 -102694795 + L1Md_F2 LINE L1 5020 5586 -297 5 1072 7843 53 8 7 chrX 63955501 63956493 -102693803 + L1Md_F2 LINE L1 5587 6579 -3 5 1072 294 333 98 27 chrX 63958717 63958942 -102691354 - MIRb SINE MIR 0 268 28 5 1072 1199 49 0 0 chrX 63959405 63959548 -102690748 + B1_Mus2 SINE Alu 1 143 -4 5 1072 477 0 0 0 chrX 63959550 63959603 -102690693 + (GA)n Simple_repeat Simple_repeat 2 54 0 5 1072 218 309 70 23 chrX 63959686 63959815 -102690481 - MIR SINE MIR -46 216 82 5 1072 546 29 0 0 chrX 63959939 63960007 -102690289 + (TC)n Simple_repeat Simple_repeat 2 69 0 5 1072 869 304 63 35 chrX 63960008 63960407 -102689889 + Lx9 LINE L1 6489 6898 -746 5 1072 1071 321 45 20 chrX 63960795 63961284 -102689012 + Lx8 LINE L1 6109 6609 -864 5 1072 23 86 0 0 chrX 63961370 63961428 -102688868 + AT_rich Low_complexity Low_complexity 1 58 0 5 1072 299 368 6 41 chrX 63962045 63962215 -102688081 + RSINE1 SINE B4 2 165 0 5 1072 23 0 0 0 chrX 63962237 63962260 -102688036 + AT_rich Low_complexity Low_complexity 1 23 0 5 1072 358 248 731 0 chrX 63962306 63962453 -102687843 + MLT1A1 LTR MaLR 152 406 -2 5 16 1081 342 109 15 chrX 63962853 63963319 -102686977 + LTR33 LTR ERVL 6 515 0 5 1073 366 327 50 36 chrX 63963908 63964127 -102686169 + L1M5 LINE L1 5313 5534 -590 5 1073 1640 142 70 28 chrX 63964421 63964777 -102685519 - L1_Mur3 LINE L1 -475 5405 5035 5 1073 870 38 0 0 chrX 63964826 63964932 -102685364 + (TCTCCC)n Simple_repeat Simple_repeat 4 109 0 5 1073 225 0 0 0 chrX 63964937 63964962 -102685334 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 1073 471 255 21 28 chrX 63964972 63965117 -102685179 - Lx9 LINE L1 -1671 5973 5830 5 1073 26 64 0 0 chrX 63965238 63965285 -102685011 + AT_rich Low_complexity Low_complexity 1 47 0 5 1073 612 327 105 35 chrX 63965482 63965739 -102684557 - B4A SINE B4 0 292 18 5 1073 298 299 0 0 chrX 63965790 63965857 -102684439 - ID4_ SINE ID -10 73 7 5 1073 348 282 68 40 chrX 63966938 63967086 -102683210 - Lx8 LINE L1 -238 7235 7084 5 1073 284 296 143 90 chrX 63967978 63968176 -102682120 + MIR SINE MIR 56 262 -6 5 1073 4203 234 196 24 chrX 63968358 63968749 -102681547 + Lx7 LINE L1 5797 6177 -1519 5 1073 720 89 0 0 chrX 63968749 63968850 -102681446 + (TCTCTG)n Simple_repeat Simple_repeat 2 102 0 5 1073 4203 234 196 24 chrX 63968850 63969784 -102680512 + Lx7 LINE L1 6178 7349 -347 5 1073 202 232 0 55 chrX 63969796 63969869 -102680427 + (TTTG)n Simple_repeat Simple_repeat 2 70 0 5 1073 6145 172 37 5 chrX 63969878 63971324 -102678972 - Lx4B LINE L1 -19 6981 5460 5 1073 3749 38 2 0 chrX 63971598 63972049 -102678247 - L1Md_T LINE L1 0 6582 6131 5 1073 28 29 0 0 chrX 63972229 63972264 -102678032 + AT_rich Low_complexity Low_complexity 1 35 0 5 1073 227 245 0 75 chrX 63972534 63972587 -102677709 + ID SINE ID 29 77 -147 5 1073 34179 67 2 6 chrX 63972945 63975675 -102674621 - L1Md_F2 LINE L1 0 6585 3871 5 1073 405 0 0 0 chrX 63975675 63975720 -102674576 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 5 1073 240 35 0 0 chrX 63975720 63975748 -102674548 + (TTG)n Simple_repeat Simple_repeat 1 29 0 6 1073 1179 43 0 0 chrX 63975749 63975890 -102674406 - B1_Mm SINE Alu -6 141 1 6 1073 34179 75 2 7 chrX 63975890 63977639 -102672657 - L1Md_F2 LINE L1 -2016 3870 2121 5 1073 1689 21 0 0 chrX 63977639 63977829 -102672467 + B2_Mm1t SINE B2 2 191 -2 6 1073 34179 97 12 8 chrX 63977829 63979354 -102670942 - L1Md_F2 LINE L1 -3766 2120 610 5 1073 1255 52 0 0 chrX 63979405 63979560 -102670736 + L1Md_A LINE L1 5432 5586 -297 6 1073 8576 26 0 0 chrX 63979560 63980555 -102669741 + L1Md_A LINE L1 5587 6581 -1 6 1073 21 71 0 0 chrX 63980592 63980634 -102669662 + AT_rich Low_complexity Low_complexity 1 42 0 6 1073 351 281 21 10 chrX 63980981 63981078 -102669218 + MLT2C1 LTR ERVL 122 219 -178 6 1073 25 0 0 0 chrX 63981600 63981625 -102668671 + AT_rich Low_complexity Low_complexity 1 25 0 6 1073 566 148 11 0 chrX 63981640 63981728 -102668568 + U1 snRNA snRNA 76 164 -1 6 1073 25 0 0 0 chrX 63982138 63982163 -102668133 + AT_rich Low_complexity Low_complexity 1 25 0 6 1073 1054 97 7 0 chrX 63982302 63982447 -102667849 + B1_Mus1 SINE Alu 2 147 -1 6 1073 203 32 65 0 chrX 63982448 63982479 -102667817 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 6 1073 282 364 27 40 chrX 63982651 63982800 -102667496 - B1F SINE Alu 0 149 3 6 1073 301 210 32 0 chrX 63983144 63983206 -102667090 - MurSatRep1 Unknown Unknown -1855 282 219 6 1073 206 83 0 53 chrX 63983210 63983248 -102667048 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 6 1073 595 182 36 0 chrX 63984080 63984190 -102666106 + B3A SINE B2 1 114 -84 6 1073 1281 292 47 20 chrX 63984340 63984742 -102665554 - MTD LTR MaLR 0 419 7 6 1073 6075 227 43 52 chrX 63985063 63987465 -102662831 + Lx5 LINE L1 4597 6980 -70 6 1073 447 340 13 39 chrX 63988135 63988291 -102662005 + MER5A1 DNA MER1_type 9 160 -6 6 1073 2680 80 18 13 chrX 63988682 63989063 -102661233 - Lx3A LINE L1 0 6981 6599 6 1073 282 22 22 0 chrX 63989089 63989134 -102661162 + L1Md_T LINE L1 6536 6581 -1 6 1073 347 282 19 0 chrX 63989349 63989452 -102660844 + L1M5 LINE L1 5653 5757 -483 6 1073 25 31 0 0 chrX 63989764 63989796 -102660500 + AT_rich Low_complexity Low_complexity 1 32 0 6 1073 270 236 0 0 chrX 63989890 63989945 -102660351 - B1F SINE Alu -11 138 84 6 1073 3681 111 4 0 chrX 63990026 63990550 -102659746 - Lx3B LINE L1 -10 5876 5351 6 1073 6569 141 19 5 chrX 63990550 63991636 -102658660 + Lx3B LINE L1 5869 6970 -3 6 1073 24 0 0 0 chrX 63991715 63991739 -102658557 + AT_rich Low_complexity Low_complexity 1 24 0 6 1073 15158 66 19 1 chrX 63991837 63994524 -102655772 - L1Md_F2 LINE L1 -12 6570 3845 6 1073 3630 178 46 96 chrX 63994524 63995336 -102654960 - RMER19B LTR ERVK -131 771 1 6 1073 4035 142 17 3 chrX 63995336 63996047 -102654249 + Lx4B LINE L1 3808 4528 -1349 6 1073 9452 92 26 9 chrX 63996046 63997404 -102652892 + Lx3_Mus LINE L1 5628 7009 0 6 1073 7411 148 29 42 chrX 63997421 63997518 -102652778 + Lx4B LINE L1 4513 4608 -1269 6 1073 1115 124 11 6 chrX 63997518 63997696 -102652600 + B2_Mm2 SINE B2 3 181 -14 6 1073 7411 148 29 42 chrX 63997696 63997731 -102652565 + Lx4B LINE L1 4609 4609 -1268 6 1073 510 17 0 0 chrX 63997731 63997790 -102652506 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 6 1073 7411 153 23 38 chrX 63997790 63999558 -102650738 + Lx4B LINE L1 4609 6386 -672 6 1073 2874 118 20 2 chrX 63999555 63999998 -102650298 + L1_Mm LINE L1 4498 4948 -935 6 1073 6292 103 18 1 chrX 64000001 64000136 -102650160 + Lx LINE L1 4952 5086 -797 1 1073 4009 44 2 4 chrX 64000136 64000634 -102649662 + L1Md_F3 LINE L1 6084 6580 -4 2 1073 6292 105 25 1 chrX 64000634 64001480 -102648816 + Lx LINE L1 5087 5984 -670 1 1073 3189 178 63 14 chrX 64001481 64002118 -102648178 + Lx4B LINE L1 6384 7051 -7 3 1073 239 229 91 27 chrX 64002317 64002418 -102647878 + PB1 SINE Alu 17 125 -24 4 1073 297 0 0 0 chrX 64002918 64002951 -102647345 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 5 1073 264 280 0 0 chrX 64002955 64003005 -102647291 - BC1_Mm scRNA scRNA -79 73 24 6 1073 1432 238 115 8 chrX 64003572 64003937 -102646359 - MTC LTR MaLR 0 421 18 7 1073 21 0 0 0 chrX 64004293 64004314 -102645982 + AT_rich Low_complexity Low_complexity 1 21 0 8 1073 201 323 48 0 chrX 64004483 64004545 -102645751 - L4 LINE RTE -766 1263 1199 9 1073 25 0 0 0 chrX 64004680 64004705 -102645591 + AT_rich Low_complexity Low_complexity 1 25 0 1 1073 345 100 0 0 chrX 64004822 64004872 -102645424 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 1073 258 176 0 0 chrX 64004872 64004923 -102645373 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 1073 409 321 89 20 chrX 64004941 64005114 -102645182 - B3A SINE B2 -30 186 1 1 1073 234 0 0 0 chrX 64005263 64005289 -102645007 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1073 183 50 48 48 chrX 64005348 64005390 -102644906 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 1 1073 4878 50 18 3 chrX 64005469 64006087 -102644209 - L1Md_F2 LINE L1 -3 6579 5953 1 1073 3511 99 39 5 chrX 64006345 64007303 -102642993 + L1VL4 LINE L1 401 1390 -2169 1 1073 2924 131 15 2 chrX 64007288 64007764 -102642532 + L1_Mur2 LINE L1 3956 4437 -1440 1 1073 1773 126 10 7 chrX 64007759 64008048 -102642248 - Lx3B LINE L1 -739 6234 5945 1 1073 1923 61 4 0 chrX 64008191 64008438 -102641858 + L1_Mus1 LINE L1 6320 6567 0 2 1073 1944 150 15 9 chrX 64008906 64009235 -102641061 - Lx3A LINE L1 -6 6975 6645 2 1073 22 0 0 0 chrX 64009440 64009462 -102640834 + AT_rich Low_complexity Low_complexity 1 22 0 2 1073 728 318 92 15 chrX 64009677 64010003 -102640293 + Lx9 LINE L1 6536 6886 -758 2 1073 653 282 131 32 chrX 64010004 64010104 -102640192 + L1M3 LINE L1 3158 3259 -2881 2 1073 1591 52 0 0 chrX 64010104 64010297 -102639999 + B2_Mm1t SINE B2 1 193 0 2 1073 653 282 131 32 chrX 64010297 64010452 -102639844 + L1M3 LINE L1 3260 3431 -2709 2 1073 219 36 0 0 chrX 64010452 64010480 -102639816 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 1073 653 282 131 32 chrX 64010480 64010750 -102639546 + L1M3 LINE L1 3432 3735 -2405 2 1073 499 376 71 19 chrX 64010851 64011176 -102639120 - Lx8 LINE L1 -21 7452 7111 2 1073 365 326 0 13 chrX 64011253 64011402 -102638894 + L1MA7 LINE L1 5894 6040 -251 2 1073 2135 123 15 6 chrX 64011455 64011789 -102638507 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1073 24254 45 26 16 chrX 64011791 64014868 -102635428 + IAPEz-int LTR ERVK 3 3076 -3405 2 1073 7053 33 2 17 chrX 64014854 64015717 -102634579 + IAPEz-int LTR ERVK 5630 6479 -2 2 1073 2135 123 15 6 chrX 64015719 64016053 -102634243 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1073 228 189 40 0 chrX 64018629 64018703 -102631593 + GA-rich Low_complexity Low_complexity 2 78 0 3 1073 244 271 0 0 chrX 64019355 64019403 -102630893 - L4 LINE RTE -199 1830 1783 3 1073 3304 181 54 57 chrX 64019590 64020328 -102629968 - Lx3C LINE L1 -4 6972 6237 3 1073 339 193 0 10 chrX 64020313 64020391 -102629905 + Lx2B LINE L1 5644 5723 -517 3 1073 380 305 59 8 chrX 64020545 64020664 -102629632 + Lx9 LINE L1 7220 7344 -300 3 1073 376 258 0 33 chrX 64020691 64020783 -102629513 - B4A SINE B4 -202 90 2 3 1073 558 186 14 82 chrX 64021197 64021343 -102628953 + L1_Rod LINE L1 5580 5715 -132 3 1073 495 0 0 0 chrX 64021589 64021644 -102628652 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1073 371 341 45 37 chrX 64022246 64022380 -102627916 + B1_Mus1 SINE Alu 1 135 -13 3 1073 185 140 0 57 chrX 64022408 64022461 -102627835 + A-rich Low_complexity Low_complexity 1 50 0 3 1073 307 327 110 30 chrX 64022585 64023121 -102627175 + HAL1 LINE L1 1192 1770 -737 4 1073 347 329 32 38 chrX 64023234 64023392 -102626904 + MER5A1 DNA MER1_type 10 166 0 4 1073 25 31 0 0 chrX 64023693 64023725 -102626571 + AT_rich Low_complexity Low_complexity 1 32 0 4 1073 21 36 0 0 chrX 64023788 64023816 -102626480 + AT_rich Low_complexity Low_complexity 1 28 0 4 1073 1780 151 97 26 chrX 64023823 64024205 -102626091 + RLTR9E LTR ERVK 1 409 0 4 1073 2938 236 96 8 chrX 64026064 64026111 -102624185 + Lx7 LINE L1 3069 3143 -2737 4 1073 477 0 0 0 chrX 64026111 64026164 -102624132 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 4 1073 2938 236 96 8 chrX 64026164 64027055 -102623241 + Lx7 LINE L1 3144 4089 -1791 4 1073 1501 267 32 12 chrX 64027062 64027445 -102622851 + Lx5 LINE L1 6673 7407 -53 4 1073 1168 229 63 0 chrX 64027433 64027790 -102622506 + Lx7 LINE L1 5526 5904 -1792 4 1073 3336 268 54 8 chrX 64027813 64028750 -102621546 + Lx7 LINE L1 6304 7328 -368 4 1073 485 16 16 0 chrX 64028750 64028812 -102621484 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 1073 3336 272 55 9 chrX 64028812 64028843 -102621453 + Lx7 LINE L1 7329 7358 -338 4 1073 250 244 193 0 chrX 64028878 64028997 -102621299 + Lx6 LINE L1 7319 7460 0 4 1073 185 189 132 0 chrX 64029525 64029578 -102620718 + L3 LINE CR1 2198 2257 -2232 5 1073 350 222 81 0 chrX 64031146 64031245 -102619051 + Lx9 LINE L1 7350 7456 -188 5 1073 26 0 0 0 chrX 64031314 64031340 -102618956 + AT_rich Low_complexity Low_complexity 1 26 0 5 1073 348 111 0 0 chrX 64031950 64032013 -102618283 + (CAT)n Simple_repeat Simple_repeat 3 65 0 5 1073 439 46 187 48 chrX 64034227 64034323 -102615973 + B1_Mus1 SINE Alu 1 111 -9 5 1073 216 0 0 0 chrX 64034323 64034347 -102615949 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1073 26 0 0 0 chrX 64034798 64034824 -102615472 + AT_rich Low_complexity Low_complexity 1 26 0 5 1073 2895 166 174 11 chrX 64034828 64035636 -102614660 - Lx4B LINE L1 -700 6358 5412 5 1073 1993 224 35 7 chrX 64035632 64036140 -102614156 + Lx4B LINE L1 6350 6864 -136 5 1073 324 214 35 23 chrX 64036153 64036239 -102614057 + L1_Mur3 LINE L1 1893 1979 -3901 5 1073 2050 103 18 36 chrX 64036244 64036577 -102613719 + IAPLTR2b LTR ERVK 1 327 0 5 1073 314 67 0 22 chrX 64036579 64036625 -102613671 - tRNA-Phe-TTY tRNA tRNA 0 76 32 6 1073 12613 27 0 0 chrX 64036625 64038064 -102612232 + IAPEz-int LTR ERVK 1638 3076 -3405 6 1073 6610 57 13 11 chrX 64038050 64038898 -102611398 + IAPEz-int LTR ERVK 5630 6479 -2 6 1073 2050 103 18 36 chrX 64038900 64039233 -102611063 + IAPLTR2b LTR ERVK 1 327 0 6 1073 569 222 129 15 chrX 64039246 64039447 -102610849 + L1_Mur3 LINE L1 1995 2218 -3662 5 1073 1511 214 146 8 chrX 64039448 64039811 -102610485 + MTC LTR MaLR 1 413 -8 6 1073 1349 209 47 9 chrX 64039828 64040166 -102610130 + L1_Mur3 LINE L1 2216 2566 -3314 5 1073 4561 207 73 9 chrX 64040139 64041303 -102608993 + L1_Mur3 LINE L1 3862 5099 -781 5 1073 282 215 0 58 chrX 64041735 64041804 -102608492 + MTC LTR MaLR 1 65 -354 6 1073 1225 93 35 0 chrX 64041804 64041976 -102608320 + B2_Mm1t SINE B2 2 179 -14 6 1073 329 189 0 21 chrX 64042023 64042089 -102608207 + B2_Mm2 SINE B2 47 109 -107 6 1073 549 0 0 0 chrX 64042103 64042164 -102608132 + (TA)n Simple_repeat Simple_repeat 2 62 0 6 1073 306 386 55 38 chrX 64042167 64042306 -102607990 + MTC LTR MaLR 53 194 -227 6 1073 536 340 27 63 chrX 64042306 64042529 -102607767 + B3 SINE B2 2 216 0 6 1073 636 280 63 11 chrX 64042571 64042762 -102607534 + MTE2a LTR MaLR 177 377 -2 6 1073 745 118 42 106 chrX 64043810 64043952 -102606344 - B1_Mus1 SINE Alu -14 134 2 6 1073 231 239 56 69 chrX 64044150 64044222 -102606074 + Lx8 LINE L1 7207 7277 -196 7 1073 609 311 101 0 chrX 64045087 64045306 -102604990 + Lx9 LINE L1 6448 6688 -956 7 1073 3078 187 56 30 chrX 64047960 64048744 -102601552 + Lx6 LINE L1 5164 5970 -1490 7 1073 351 184 163 0 chrX 64048750 64048848 -102601448 + Lx9 LINE L1 7520 7633 -11 7 1073 327 333 86 61 chrX 64048849 64049047 -102601249 - MT2A LTR ERVL -330 203 1 7 1073 509 44 15 0 chrX 64049115 64049183 -102601113 + (TATG)n Simple_repeat Simple_repeat 3 71 0 7 1073 363 276 48 0 chrX 64049191 64049296 -102601000 + Lx9 LINE L1 7321 7430 -214 7 1073 279 0 0 0 chrX 64049320 64049351 -102600945 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 1073 429 20 0 0 chrX 64049351 64049400 -102600896 + (GA)n Simple_repeat Simple_repeat 2 51 0 7 1073 218 32 0 31 chrX 64050657 64050689 -102599607 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 7 1073 979 233 73 35 chrX 64051182 64051525 -102598771 + Lx9 LINE L1 7285 7640 -4 7 1073 5418 30 0 0 chrX 64051646 64052280 -102598016 + L1Md_A LINE L1 5949 6582 0 8 1073 22 56 0 0 chrX 64055392 64055428 -102594868 + AT_rich Low_complexity Low_complexity 1 36 0 8 1073 954 288 37 12 chrX 64056628 64056874 -102593422 + MTD LTR MaLR 1 252 -167 8 1073 1734 124 201 0 chrX 64056911 64057225 -102593071 + Lx LINE L1 6108 6484 -170 8 1073 1280 266 222 10 chrX 64057295 64058029 -102592267 + Lx6 LINE L1 6267 7372 -88 8 1073 203 194 0 0 chrX 64058055 64058091 -102592205 + A-rich Low_complexity Low_complexity 1 36 0 8 1073 6727 133 23 16 chrX 64059976 64061110 -102589186 + Lx3B LINE L1 5822 6954 -19 8 1073 236 53 26 0 chrX 64061670 64061708 -102588588 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 8 1073 1049 65 0 0 chrX 64064095 64064234 -102586062 + L1_Mus1 LINE L1 6429 6567 0 8 1073 4172 164 89 28 chrX 64064277 64065093 -102585203 - Lx4A LINE L1 -2 7056 6191 8 1073 1793 152 174 7 chrX 64065106 64065520 -102584776 - L1_Mur2 LINE L1 -2163 3714 3232 9 1073 747 256 97 10 chrX 64065780 64066052 -102584244 + L1_Mur2 LINE L1 1647 1936 -3944 9 1073 26 0 0 0 chrX 64066052 64066078 -102584218 + AT_rich Low_complexity Low_complexity 1 26 0 9 1073 947 183 204 4 chrX 64066086 64066355 -102583941 + L1_Mur2 LINE L1 2638 2960 -2917 9 1073 859 276 42 125 chrX 64066355 64066690 -102583606 + ORR1D1 LTR MaLR 68 374 0 9 1073 241 367 64 9 chrX 64067371 64067481 -102582815 + B3 SINE B2 76 191 -25 9 1073 2305 252 88 7 chrX 64067653 64068712 -102581584 + Lx5 LINE L1 5423 6802 -658 9 1073 7565 25 0 1 chrX 64068735 64069617 -102580679 + L1_Mm LINE L1 4705 5586 -297 9 1073 8309 41 0 0 chrX 64069617 64070613 -102579683 + L1Md_T LINE L1 5587 6582 0 9 1073 602 333 30 19 chrX 64070630 64070899 -102579397 + Lx5 LINE L1 7146 7417 -43 9 1073 335 293 122 31 chrX 64070918 64071239 -102579057 + L1_Mur2 LINE L1 3145 3494 -2386 9 1073 3660 76 35 8 chrX 64071253 64071760 -102578536 - L1Md_F2 LINE L1 -3 6579 6059 9 1073 603 151 59 0 chrX 64071829 64071948 -102578348 + L1_Mur2 LINE L1 4059 4184 -1693 9 1073 268 263 200 50 chrX 64073276 64073416 -102576880 + Lx9 LINE L1 6970 7130 -514 1 1073 998 123 0 7 chrX 64074024 64074171 -102576125 - B1_Mus1 SINE Alu -2 146 1 1 1073 195 114 0 0 chrX 64074264 64074299 -102575997 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 1073 450 0 0 0 chrX 64074301 64074351 -102575945 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1073 1543 171 4 0 chrX 64074372 64074657 -102575639 + L1_Mur2 LINE L1 4073 4355 -1522 1 1073 5532 107 12 0 chrX 64074657 64075463 -102574833 + L1_Mus1 LINE L1 5750 6565 -2 1 1073 704 276 22 31 chrX 64075463 64075499 -102574797 + L1_Mur2 LINE L1 4352 4391 -1456 1 1073 279 0 0 0 chrX 64075674 64075705 -102574591 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1 1073 2005 253 138 10 chrX 64075985 64076680 -102573616 + Lx7 LINE L1 6132 6915 -781 1 1073 2126 162 35 5 chrX 64077648 64078045 -102572251 + Lx LINE L1 6238 6646 -8 1 1073 2170 114 0 0 chrX 64078149 64078466 -102571830 - L1_Mus1 LINE L1 -598 5969 5653 1 1073 1632 121 57 0 chrX 64078466 64078714 -102571582 + L1_Mus1 LINE L1 6304 6565 -2 1 1073 578 60 12 0 chrX 64078925 64079008 -102571288 + (TAAA)n Simple_repeat Simple_repeat 3 86 0 1 1073 2047 254 140 10 chrX 64079284 64079989 -102570307 + Lx7 LINE L1 6119 6915 -781 1 1073 2123 162 35 5 chrX 64080959 64081361 -102568935 + Lx LINE L1 6238 6651 -3 1 1073 1978 119 53 0 chrX 64081441 64081759 -102568537 - L1_Mus1 LINE L1 -580 5987 5653 1 1073 1662 117 57 0 chrX 64081759 64082007 -102568289 + L1_Mus1 LINE L1 6304 6565 -2 1 1073 396 0 0 0 chrX 64082211 64082255 -102568041 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 1 1073 2105 252 131 11 chrX 64082531 64083241 -102567055 + Lx7 LINE L1 6121 6915 -781 1 1073 2126 162 35 5 chrX 64084210 64084607 -102565689 + Lx LINE L1 6238 6646 -8 1 1073 2170 114 0 0 chrX 64084711 64085028 -102565268 - L1_Mus1 LINE L1 -598 5969 5653 1 1073 1632 121 57 0 chrX 64085028 64085276 -102565020 + L1_Mus1 LINE L1 6304 6565 -2 1 1073 578 60 12 0 chrX 64085487 64085570 -102564726 + (TAAA)n Simple_repeat Simple_repeat 3 86 0 1 1073 2062 252 140 10 chrX 64085846 64086551 -102563745 + Lx7 LINE L1 6119 6915 -781 1 1073 2123 162 35 5 chrX 64087521 64087923 -102562373 + Lx LINE L1 6238 6651 -3 1 1073 1978 119 53 0 chrX 64088003 64088321 -102561975 - L1_Mus1 LINE L1 -580 5987 5653 1 1073 1662 117 57 0 chrX 64088321 64088569 -102561727 + L1_Mus1 LINE L1 6304 6565 -2 1 1073 396 0 0 0 chrX 64088773 64088817 -102561479 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 1 1073 2239 256 113 11 chrX 64089093 64089812 -102560484 + Lx7 LINE L1 6121 6912 -784 1 1073 2256 145 37 5 chrX 64090795 64091197 -102559099 + Lx LINE L1 6238 6652 -2 1 1073 2159 132 19 8 chrX 64091248 64091608 -102558688 - L1_Mus1 LINE L1 -551 6016 5653 1 1073 1573 121 56 0 chrX 64091608 64091857 -102558439 + L1_Mus1 LINE L1 6304 6566 -1 1 1073 272 70 23 0 chrX 64092068 64092111 -102558185 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 1 1073 1459 276 92 8 chrX 64092380 64092858 -102557438 + Lx7 LINE L1 6119 6636 -1060 1 1073 203 178 0 62 chrX 64092860 64092908 -102557388 + GA-rich Low_complexity Low_complexity 2 46 0 1 134 606 230 21 21 chrX 64094077 64094219 -102556077 + B1_Mur4 SINE Alu 1 142 -8 1 1074 11440 84 19 0 chrX 64094570 64096553 -102553743 + L1Md_F2 LINE L1 4157 6184 -398 1 1074 7395 81 0 3 chrX 64096576 64097588 -102552708 + L1_Mus1 LINE L1 5587 6567 0 1 1074 804 172 104 5 chrX 64098806 64098999 -102551297 + Lx9 LINE L1 7408 7619 -25 1 1074 716 316 32 42 chrX 64099004 64099381 -102550915 + Lx9 LINE L1 6958 7330 -314 1 1074 205 182 0 0 chrX 64099501 64099534 -102550762 + (CATA)n Simple_repeat Simple_repeat 2 34 0 1 1074 21 0 0 0 chrX 64099608 64099629 -102550667 + AT_rich Low_complexity Low_complexity 1 21 0 1 1074 848 207 18 12 chrX 64099736 64099907 -102550389 + RMER15 LTR ERVL 1 172 -403 1 1074 21 0 0 0 chrX 64099942 64099963 -102550333 + AT_rich Low_complexity Low_complexity 1 21 0 1 1074 2131 174 59 52 chrX 64099973 64100397 -102549899 + RMER15 LTR ERVL 149 575 0 1 1074 1086 96 0 0 chrX 64100909 64101055 -102549241 + B1_Mus1 SINE Alu 1 146 -2 1 1074 205 195 0 0 chrX 64101362 64101403 -102548893 + T-rich Low_complexity Low_complexity 1 41 0 1 1074 289 116 13 0 chrX 64101403 64101461 -102548835 - B1_Mus2 SINE Alu 0 147 86 1 1074 4569 77 18 0 chrX 64101461 64102087 -102548209 + L1Md_F2 LINE L1 4950 5586 -297 1 1074 7511 68 4 3 chrX 64102088 64103082 -102547214 + L1Md_F2 LINE L1 5588 6582 0 1 1074 22 94 0 0 chrX 64103182 64103246 -102547050 + AT_rich Low_complexity Low_complexity 1 64 0 1 1074 295 277 124 39 chrX 64103256 64103538 -102546758 + L1M2 LINE L1 3464 3769 -2374 1 1074 225 245 19 0 chrX 64103630 64103683 -102546613 + L1_Mur3 LINE L1 3755 3808 -2072 1 1074 474 273 146 76 chrX 64103725 64104054 -102546242 + L1M2 LINE L1 4515 4836 -1307 1 1074 567 0 0 0 chrX 64104054 64104117 -102546179 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 1074 474 273 146 76 chrX 64104117 64104286 -102546010 + L1M2 LINE L1 4837 5047 -1096 1 1074 21 36 0 0 chrX 64104538 64104566 -102545730 + AT_rich Low_complexity Low_complexity 1 28 0 1 1074 22 0 0 0 chrX 64105080 64105102 -102545194 + AT_rich Low_complexity Low_complexity 1 22 0 1 1074 417 236 102 0 chrX 64106046 64106173 -102544123 + Lx8 LINE L1 6726 6865 -608 1 1074 1158 61 0 7 chrX 64106188 64106336 -102543960 + B1_Mus2 SINE Alu 1 147 0 1 1074 250 211 158 0 chrX 64106509 64106585 -102543711 + Lx8 LINE L1 6428 6515 -958 1 1074 698 373 101 20 chrX 64107022 64107517 -102542779 + MER77 LTR ERVL 62 596 -11 1 1074 344 319 20 53 chrX 64108820 64108972 -102541324 + B1F1 SINE Alu 1 147 -2 1 1074 704 224 0 15 chrX 64109782 64109918 -102540378 + B1_Mur4 SINE Alu 10 143 -7 1 1074 394 205 38 13 chrX 64110293 64110372 -102539924 + ID SINE ID 3 83 -141 1 1074 1298 97 144 13 chrX 64110477 64110706 -102539590 + Lx3A LINE L1 6064 6322 -659 1 1074 2037 114 3 3 chrX 64110706 64111015 -102539281 + Lx3A LINE L1 6662 6970 -11 1 1074 189 74 0 0 chrX 64111016 64111043 -102539253 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 1 1074 370 280 36 42 chrX 64111083 64111251 -102539045 + MER53 DNA hAT 1 167 -26 1 1074 271 308 10 99 chrX 64111564 64111665 -102538631 + L2c LINE L2 3286 3377 -10 1 1074 37 0 0 0 chrX 64111705 64111742 -102538554 + AT_rich Low_complexity Low_complexity 1 37 0 1 1074 456 34 51 0 chrX 64113039 64113098 -102537198 - L1_Mus2 LINE L1 -522 6044 5983 1 1074 2025 61 4 4 chrX 64113098 64113361 -102536935 + L1_Mus2 LINE L1 6304 6566 0 1 1074 234 191 0 0 chrX 64113665 64113712 -102536584 + (CATATA)n Simple_repeat Simple_repeat 5 51 0 1 1074 243 182 117 0 chrX 64115165 64115242 -102535054 + L1M LINE L1 5258 5343 -819 1 1074 1352 169 74 22 chrX 64115211 64115537 -102534759 + Lx5 LINE L1 5683 6040 -1010 1 1074 2907 83 11 33 chrX 64115542 64115805 -102534491 - MusHAL1 LINE L1 -610 2102 1848 1 1074 216 0 0 0 chrX 64115805 64115829 -102534467 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1074 2907 83 11 33 chrX 64115829 64116023 -102534273 - MusHAL1 LINE L1 -865 1847 1655 1 1074 8523 95 16 6 chrX 64116020 64117958 -102532338 + L1_Mus2 LINE L1 4606 6566 0 1 1074 23 0 0 0 chrX 64118553 64118576 -102531720 + AT_rich Low_complexity Low_complexity 1 23 0 1 1074 915 96 7 0 chrX 64118724 64118860 -102531436 - L1_Mus1 LINE L1 -1 6566 6430 1 1074 224 319 13 104 chrX 64118889 64118909 -102531387 + ID_B1 SINE B4 76 215 -9 1 1074 260 233 75 104 chrX 64118909 64119043 -102531253 + B1F SINE Alu 11 140 -9 1 1074 295 377 0 0 chrX 64119067 64119156 -102531140 + ID4 SINE ID 5 93 -59 1 1074 478 335 32 46 chrX 64119609 64119825 -102530471 - MER58A DNA MER1_type -2 222 10 1 1074 24 0 0 0 chrX 64120423 64120447 -102529849 + AT_rich Low_complexity Low_complexity 1 24 0 1 1074 763 218 179 0 chrX 64120599 64120778 -102529518 + RMER21A LTR ERV1 1 211 -736 1 1074 1090 184 52 37 chrX 64120801 64121080 -102529216 + RMER21A LTR ERV1 748 947 0 1 1074 29 47 0 0 chrX 64121385 64121428 -102528868 + AT_rich Low_complexity Low_complexity 1 43 0 1 1074 5983 149 53 32 chrX 64121852 64122352 -102527944 + L1_Mur1 LINE L1 2489 3001 -2885 1 1074 1126 82 0 0 chrX 64122352 64122498 -102527798 + B1_Mus1 SINE Alu 1 146 -2 1 1074 186 43 0 0 chrX 64122498 64122521 -102527775 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 1 1074 5983 149 53 32 chrX 64122521 64123270 -102527026 + L1_Mur1 LINE L1 3002 3764 -2122 1 1074 2410 143 83 5 chrX 64123267 64123723 -102526573 + Lx3B LINE L1 6446 6961 -48 1 1074 360 326 5 53 chrX 64123791 64123979 -102526317 + GA-rich Low_complexity Low_complexity 2 180 0 1 1074 611 297 40 28 chrX 64124432 64124644 -102525652 + B3A SINE B2 7 216 0 1 1074 554 315 54 24 chrX 64124670 64124836 -102525460 + MTEa LTR MaLR 1 171 -208 1 1074 709 359 51 22 chrX 64124851 64125127 -102525169 + B4A SINE B4 1 284 -8 1 1074 549 314 63 45 chrX 64125219 64125442 -102524854 + MTEa LTR MaLR 151 377 -2 1 1074 880 84 53 0 chrX 64125576 64125707 -102524589 + B1_Mus1 SINE Alu 1 138 -10 1 1074 212 0 36 0 chrX 64125707 64125735 -102524561 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1074 189 0 0 0 chrX 64125837 64125858 -102524438 + (TTTTC)n Simple_repeat Simple_repeat 2 22 0 1 1074 1166 36 0 0 chrX 64125860 64125998 -102524298 - B1_Mus1 SINE Alu -6 142 5 1 1074 484 311 11 68 chrX 64126375 64126565 -102523731 + B4 SINE B4 112 290 -2 1 1074 297 0 0 0 chrX 64127835 64127868 -102522428 + (CTG)n Simple_repeat Simple_repeat 2 34 0 1 1074 553 233 29 50 chrX 64128190 64128330 -102521966 + B1_Mur3 SINE Alu 13 149 0 1 1074 217 324 56 118 chrX 64128191 64128352 -102521944 + B4A SINE B4 99 249 -43 1 1074 413 105 0 34 chrX 64128779 64128803 -102521493 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1074 812 102 17 0 chrX 64128803 64128921 -102521375 + PB1D9 SINE Alu 1 120 0 1 1074 413 105 0 34 chrX 64128921 64128985 -102521311 + (A)n Simple_repeat Simple_repeat 1 61 0 2 1074 237 311 10 62 chrX 64129190 64129286 -102521010 - PB1D7 SINE Alu -7 113 23 2 1074 219 340 25 99 chrX 64129842 64129963 -102520333 - PB1D7 SINE Alu -1 119 8 2 1074 243 79 0 0 chrX 64130000 64130038 -102520258 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2 1074 243 322 17 0 chrX 64131092 64131151 -102519145 - tRNA-Ala-GCY_ tRNA tRNA -15 60 1 2 1074 227 31 0 30 chrX 64131259 64131292 -102519004 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 2 1074 180 0 0 0 chrX 64131298 64131318 -102518978 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 1074 5263 117 15 2 chrX 64131373 64132167 -102518129 - L1_Mus4 LINE L1 -6 6630 5827 2 1074 4633 53 14 3 chrX 64132166 64132755 -102517541 - L1Md_F3 LINE L1 -1 6583 5989 2 1074 790 64 9 0 chrX 64132755 64132864 -102517432 - L1_Mus4 LINE L1 -795 5841 5732 2 1074 301 202 51 0 chrX 64132859 64132938 -102517358 + RMER1B Other Other 984 1066 0 2 1074 390 42 0 0 chrX 64132984 64133032 -102517264 + (GAAA)n Simple_repeat Simple_repeat 3 50 0 2 1074 1611 225 92 14 chrX 64133048 64133472 -102516824 + L1Md_F LINE L1 467 923 -5693 2 1074 2496 55 3 9 chrX 64133472 64133805 -102516491 - MTA_Mm LTR MaLR -65 331 1 2 1074 339 106 0 0 chrX 64133805 64133852 -102516444 + L1Md_F LINE L1 1904 1950 -3933 2 1074 23 0 0 0 chrX 64134276 64134299 -102515997 + AT_rich Low_complexity Low_complexity 1 23 0 2 1074 219 36 0 0 chrX 64134329 64134357 -102515939 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2 1074 1090 63 7 14 chrX 64134357 64134493 -102515803 - B1_Mm SINE Alu -10 137 1 2 1074 222 37 0 0 chrX 64134565 64134592 -102515704 + (TTA)n Simple_repeat Simple_repeat 1 27 0 2 1074 479 122 231 11 chrX 64134631 64134722 -102515574 - B3 SINE B2 -102 114 4 2 1074 209 111 0 62 chrX 64135468 64135516 -102514780 + T-rich Low_complexity Low_complexity 4 48 0 2 1074 1412 85 0 0 chrX 64135530 64135718 -102514578 - Lx3A LINE L1 -260 6721 6534 2 1074 235 261 32 64 chrX 64135952 64136046 -102514250 + MIRb SINE MIR 109 199 -69 2 1074 23 33 0 0 chrX 64136578 64136608 -102513688 + AT_rich Low_complexity Low_complexity 1 30 0 2 1074 234 174 0 0 chrX 64136956 64137002 -102513294 + CT-rich Low_complexity Low_complexity 2 47 0 2 1074 227 291 214 18 chrX 64137122 64137234 -102513062 + B4A SINE B4 3 136 -156 2 1074 296 64 0 21 chrX 64137360 64137408 -102512888 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1074 897 122 0 28 chrX 64138369 64138546 -102511750 + CT-rich Low_complexity Low_complexity 4 175 0 2 1074 235 341 0 0 chrX 64138566 64138648 -102511648 - ID4 SINE ID 0 83 2 2 1074 419 303 90 0 chrX 64139009 64139131 -102511165 - ID_B1 SINE B4 -1 223 91 2 1074 1841 206 221 14 chrX 64139162 64139646 -102510650 + Lx3C LINE L1 6470 7053 -5 2 1074 259 206 160 21 chrX 64139646 64139740 -102510556 + MER5A1 DNA MER1_type 59 165 -1 2 1074 1049 110 0 0 chrX 64139854 64140000 -102510296 + B1_Mus1 SINE Alu 2 147 -1 2 1074 211 50 75 0 chrX 64140009 64140049 -102510247 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 2 1074 668 295 71 29 chrX 64140131 64140442 -102509854 - MLT1C LTR MaLR -3 464 141 2 1074 26 0 0 0 chrX 64140523 64140549 -102509747 + AT_rich Low_complexity Low_complexity 1 26 0 2 1074 250 184 20 0 chrX 64140610 64140659 -102509637 - MLT1C LTR MaLR -365 102 53 2 1074 295 288 9 46 chrX 64140865 64140974 -102509322 - ID_B1 SINE B4 -3 221 117 2 1074 870 279 124 38 chrX 64142211 64142550 -102507746 + ORR1D2 LTR MaLR 1 368 -2 2 1074 234 242 0 70 chrX 64142593 64142636 -102507660 + MamRep605 Unknown Unknown 109 147 -729 2 1074 435 265 64 29 chrX 64142636 64142807 -102507489 - MER5B DNA MER1_type -1 177 1 2 1074 234 242 0 70 chrX 64142807 64142834 -102507462 + MamRep605 Unknown Unknown 148 174 -702 2 1074 592 244 65 24 chrX 64142914 64143082 -102507214 + MER3 DNA MER1_type 34 208 -1 2 1074 563 348 38 28 chrX 64143104 64143317 -102506979 - MER58A DNA MER1_type -9 215 1 2 1074 458 75 12 12 chrX 64143343 64143424 -102506872 - L1Md_F2 LINE L1 -5 6577 6497 2 1074 545 299 19 93 chrX 64143518 64143732 -102506564 - B3A SINE B2 0 198 1 2 1074 5540 207 52 10 chrX 64143776 64144899 -102505397 + Lx5 LINE L1 5880 7050 0 2 1074 483 18 0 0 chrX 64144995 64145051 -102505245 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 1074 450 53 0 0 chrX 64145838 64145895 -102504401 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1074 434 18 18 0 chrX 64145895 64145949 -102504347 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1074 368 212 40 0 chrX 64146169 64146268 -102504028 + Lx9 LINE L1 7541 7643 -1 2 1074 230 403 77 8 chrX 64147143 64147273 -102503023 + MLT1J1 LTR MaLR 267 405 -39 2 1074 37 62 0 0 chrX 64148201 64148266 -102502030 + AT_rich Low_complexity Low_complexity 1 65 0 2 1074 195 254 316 0 chrX 64148463 64148577 -102501719 - L2b LINE L2 -2 3373 3224 2 1074 3665 49 0 4 chrX 64149133 64149586 -102500710 + L1Md_F3 LINE L1 6120 6570 -14 2 1074 717 310 54 4 chrX 64149710 64149950 -102500346 + B4 SINE B4 40 291 -1 2 1074 393 316 79 0 chrX 64150070 64150209 -102500087 + MLT2B4 LTR ERVL 12 161 -395 2 1074 396 0 0 0 chrX 64150319 64150363 -102499933 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 1074 441 36 0 0 chrX 64150363 64150417 -102499879 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1074 836 154 20 40 chrX 64150483 64150632 -102499664 + B1_Mur4 SINE Alu 2 147 -3 2 1074 284 375 75 16 chrX 64150782 64150969 -102499327 + LTR16A1 LTR ERVL 168 365 -91 2 1074 1105 271 30 30 chrX 64151337 64151634 -102498662 - Lx6 LINE L1 -4 7456 7160 2 1074 7999 55 2 2 chrX 64151968 64153148 -102497148 - L1Md_F2 LINE L1 0 6582 5403 2 1074 189 0 0 0 chrX 64153556 64153577 -102496719 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1074 250 303 43 163 chrX 64154049 64154338 -102495958 - MTEa LTR MaLR 0 379 96 2 1074 2113 146 47 26 chrX 64154451 64154837 -102495459 - ORR1B1 LTR MaLR 0 394 1 2 1074 363 343 19 0 chrX 64154960 64155068 -102495228 + PB1D10 SINE Alu 6 115 -2 2 1074 1255 7 0 0 chrX 64155632 64155780 -102494516 + L1Md_A LINE L1 6435 6582 0 2 1074 842 186 0 20 chrX 64156235 64156383 -102493913 - B1_Mur4 SINE Alu -5 145 1 2 1074 276 385 0 0 chrX 64156458 64156549 -102493747 + PB1 SINE Alu 7 97 -30 2 1074 280 360 0 9 chrX 64156571 64156686 -102493610 + GA-rich Low_complexity Low_complexity 3 116 0 2 1074 486 0 0 0 chrX 64157802 64157856 -102492440 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 1074 271 265 22 67 chrX 64158084 64158173 -102492123 + MLT1A1 LTR MaLR 289 373 -35 2 1074 504 299 133 5 chrX 64158244 64158432 -102491864 + B3 SINE B2 4 215 -1 2 1074 7636 110 47 7 chrX 64158553 64160420 -102489876 - L1_Mus3 LINE L1 -8 6630 4697 2 1074 5067 115 8 1 chrX 64160421 64161202 -102489094 + L1_Mus3 LINE L1 3906 4691 -1192 2 1074 349 341 42 31 chrX 64161382 64161573 -102488723 + MIR SINE MIR 64 257 -11 2 1074 402 21 0 0 chrX 64161678 64161725 -102488571 + (TATG)n Simple_repeat Simple_repeat 4 50 0 2 1074 254 350 0 57 chrX 64161749 64161855 -102488441 + MIR SINE MIR 65 164 -98 2 1074 2956 69 8 0 chrX 64162158 64162547 -102487749 - L1_Mus1 LINE L1 0 6567 6176 2 1074 199 211 0 0 chrX 64162660 64162698 -102487598 + MIRm SINE MIR 221 258 -18 2 1074 245 191 13 93 chrX 64163672 64163747 -102486549 + RLTR25A LTR ERVK 514 582 -521 2 1074 666 76 0 0 chrX 64163682 64163774 -102486522 + B1_Mus2 SINE Alu 48 139 -8 2 1074 188 390 0 37 chrX 64164512 64164564 -102485732 - MIR SINE MIR -157 105 56 2 1074 2442 177 182 21 chrX 64164564 64165090 -102485206 + RMER19C LTR ERVK 1 611 0 2 1074 188 390 0 37 chrX 64165090 64165146 -102485150 - MIR SINE MIR -207 55 1 2 1074 4024 69 6 15 chrX 64165562 64166103 -102484193 + L1Md_F2 LINE L1 6046 6581 -1 2 1074 2375 162 152 16 chrX 64166415 64166930 -102483366 - RMER4B LTR ERVK 0 585 1 2 1074 901 311 82 16 chrX 64167107 64167424 -102482872 - MER2 DNA MER2_type 0 345 8 2 1074 30 27 0 0 chrX 64167431 64167468 -102482828 + AT_rich Low_complexity Low_complexity 1 37 0 2 1074 3687 179 45 54 chrX 64167468 64167815 -102482481 + RLTR25B LTR ERVK 5 335 -693 2 1074 2185 121 12 0 chrX 64167815 64168138 -102482158 - ORR1A2 LTR MaLR 0 327 1 2 1074 3687 179 45 54 chrX 64168138 64168566 -102481730 + RLTR25B LTR ERVK 336 773 -255 2 1074 5645 83 1 3 chrX 64168694 64169451 -102480845 - L1_Mus2 LINE L1 -1 6565 5810 2 1074 19240 111 5 19 chrX 64169451 64172651 -102477645 - L1_Mm LINE L1 -839 5044 1891 2 1074 5189 166 26 135 chrX 64172648 64174060 -102476236 + Lx4A LINE L1 4496 5753 -124 2 1074 1362 45 11 0 chrX 64174060 64174238 -102476058 + L1Md_A LINE L1 6403 6582 0 2 1074 7122 154 35 7 chrX 64174233 64175473 -102474823 + Lx4A LINE L1 5783 7058 0 2 1074 520 342 6 0 chrX 64175523 64175704 -102474592 + Lx8 LINE L1 7107 7288 -185 2 1074 725 100 8 0 chrX 64175906 64176036 -102474260 + (TC)n Simple_repeat Simple_repeat 1 131 0 2 1074 324 0 0 0 chrX 64176036 64176072 -102474224 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1074 4069 71 34 3 chrX 64176451 64177115 -102473181 + Lx3_Mus LINE L1 5511 6183 -826 2 1074 213 108 0 0 chrX 64177147 64177184 -102473112 + (TCTCTG)n Simple_repeat Simple_repeat 4 40 0 2 1074 1095 272 100 38 chrX 64177202 64177927 -102472369 - Lx9 LINE L1 -1551 6145 5379 2 1074 250 24 71 0 chrX 64178060 64178102 -102472194 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 2 1074 497 325 128 81 chrX 64178735 64179203 -102471093 + MLT1E1 LTR MaLR 63 552 -102 2 1074 9872 82 4 1 chrX 64181509 64182918 -102467378 + L1Md_F2 LINE L1 4172 5585 -298 2 1074 7537 70 0 9 chrX 64182919 64183911 -102466385 + L1Md_F2 LINE L1 5587 6569 -13 2 1074 396 0 0 0 chrX 64184484 64184528 -102465768 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1074 869 334 72 72 chrX 64185720 64186167 -102464129 - MLT1D LTR MaLR -45 422 12 3 1074 22 0 0 0 chrX 64186235 64186257 -102464039 + AT_rich Low_complexity Low_complexity 1 22 0 3 1074 744 314 0 5 chrX 64187235 64187446 -102462850 + B3 SINE B2 2 211 -5 3 1074 593 307 125 31 chrX 64187954 64188273 -102462023 - Lx8 LINE L1 -3 7470 7122 3 1074 893 224 130 92 chrX 64188554 64188905 -102461391 + ORR1D1 LTR MaLR 4 402 -5 3 1074 551 241 0 8 chrX 64189209 64189326 -102460970 + RSINE1 SINE B4 8 123 -42 3 1074 41 0 0 0 chrX 64189337 64189378 -102460918 + AT_rich Low_complexity Low_complexity 1 41 0 3 1074 726 291 11 6 chrX 64189407 64189587 -102460709 - B3A SINE B2 -17 181 1 3 1074 197 345 123 9 chrX 64190580 64190694 -102459602 + MIR3 SINE MIR 13 139 -69 3 1074 345 292 62 77 chrX 64191662 64191870 -102458426 + MIR SINE MIR 11 215 -47 3 1074 225 343 75 101 chrX 64192107 64192169 -102458127 + MLT2B4 LTR ERVL 1 67 -487 3 1074 323 44 22 0 chrX 64192169 64192214 -102458082 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1074 444 305 154 42 chrX 64192214 64192596 -102457700 + MLT2B4 LTR ERVL 68 483 -37 3 1074 6710 105 14 16 chrX 64192597 64193703 -102456593 - Lx LINE L1 -38 6616 5506 3 1074 3541 81 10 2 chrX 64193688 64194421 -102455875 + L1VL4 LINE L1 632 1374 -2185 3 1074 198 71 0 0 chrX 64194468 64194496 -102455800 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 3 1074 386 230 201 7 chrX 64194496 64194645 -102455651 - Lx5 LINE L1 -18 7032 6855 3 1074 192 317 76 38 chrX 64194654 64194759 -102455537 + L2 LINE L2 2815 2923 -496 3 1074 1102 57 22 28 chrX 64195535 64195716 -102454580 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 1074 453 82 71 0 chrX 64195716 64195801 -102454495 + CT-rich Low_complexity Low_complexity 4 94 0 3 1074 1020 114 11 11 chrX 64195803 64195980 -102454316 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 3 1074 292 308 0 13 chrX 64196220 64196299 -102453997 - BC1_Mm scRNA scRNA -74 78 1 3 1074 307 301 161 44 chrX 64196345 64196635 -102453661 - L1ME3B LINE L1 -173 5989 5661 3 1074 245 220 101 114 chrX 64196658 64196807 -102453489 + L1VL1 LINE L1 241 387 -6035 3 1074 430 246 43 11 chrX 64196915 64197068 -102453228 + L1Md_F LINE L1 551 805 -5814 3 1074 5316 135 7 144 chrX 64197065 64198018 -102452278 + L1Md_F LINE L1 728 1608 -4278 3 1074 1071 98 0 0 chrX 64198018 64198161 -102452135 - B1_Mus1 SINE Alu 0 148 6 3 1074 5316 135 7 144 chrX 64198161 64198947 -102451349 + L1Md_F LINE L1 1609 2336 -3550 3 1074 748 208 103 140 chrX 64198947 64199355 -102450941 - RLTR9C LTR ERVK 0 393 1 3 1074 423 110 14 0 chrX 64199360 64199433 -102450863 - ETnERV2-int LTR ERVK -4 7402 7329 3 1074 245 188 141 28 chrX 64199433 64199504 -102450792 - RLTR13B1 LTR ERVK -365 537 459 3 1074 647 191 78 6 chrX 64199528 64199690 -102450606 - RLTR13B1 LTR ERVK -601 301 128 3 1074 6459 134 32 48 chrX 64199690 64200835 -102449461 - ETnERV-int LTR ERVK -227 7179 6053 3 1074 8560 158 9 5 chrX 64200829 64202473 -102447823 - ETnERV-int LTR ERVK -2128 5278 2846 3 1074 2077 34 0 0 chrX 64202480 64202743 -102447553 - RLTR10-int LTR ERVK -1686 301 39 3 1074 3011 36 7 114 chrX 64202752 64203189 -102447107 - RLTR10 LTR ERVK 0 390 1 3 1074 565 306 16 11 chrX 64203467 64203652 -102446644 + SRV_MM-int LTR ERVK 1939 2124 -4043 3 1074 1443 327 32 24 chrX 64203725 64204483 -102445813 - ETnERV-int LTR ERVK -3613 2554 1791 3 1074 10709 122 7 8 chrX 64204714 64206383 -102443913 - ETnERV-int LTR ERVK -1647 1667 2 3 1074 814 263 82 79 chrX 64206384 64206776 -102443520 - RLTR9C LTR ERVK 0 393 1 3 1074 2681 103 90 2 chrX 64206776 64207231 -102443065 + MusHAL1 LINE L1 1124 1618 -1094 3 1074 1126 83 6 23 chrX 64207231 64207404 -102442892 + RLTR45-int LTR ERVK 1910 2079 -5327 3 1074 6487 135 41 78 chrX 64207437 64208975 -102441321 + RLTR45-int LTR ERVK 2870 5925 -1319 3 1074 465 161 35 0 chrX 64208949 64209036 -102441260 + ETnERV3-int LTR ERVK 5688 5777 -31 3 1074 5018 85 45 9 chrX 64209056 64209818 -102440478 + RLTR13D1 LTR ERVK 11 893 0 3 1074 18406 109 12 10 chrX 64209818 64213554 -102436742 + L1_Mus1 LINE L1 2824 6567 0 3 1074 486 61 0 0 chrX 64213818 64213884 -102436412 + (TC)n Simple_repeat Simple_repeat 2 67 0 3 1074 2390 204 77 6 chrX 64213931 64214454 -102435842 - Lx6 LINE L1 -4 7456 6897 3 1074 432 0 0 0 chrX 64214469 64214517 -102435779 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1074 351 0 0 0 chrX 64214519 64214558 -102435738 + (GA)n Simple_repeat Simple_repeat 2 40 0 3 1074 210 136 0 0 chrX 64216073 64216117 -102434179 + (A)n Simple_repeat Simple_repeat 1 44 0 3 1074 27 62 0 0 chrX 64216236 64216284 -102434012 + AT_rich Low_complexity Low_complexity 1 48 0 3 1074 207 0 0 0 chrX 64217429 64217452 -102432844 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 3 1074 279 0 0 0 chrX 64218680 64218711 -102431585 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1074 296 143 18 0 chrX 64219342 64219398 -102430898 + A-rich Low_complexity Low_complexity 2 58 0 3 1074 214 186 0 0 chrX 64219541 64219584 -102430712 + T-rich Low_complexity Low_complexity 1 43 0 3 1074 3084 60 17 0 chrX 64220189 64220264 -102430032 + L1Md_F2 LINE L1 5161 5242 -641 3 1074 627 100 0 0 chrX 64220264 64220374 -102429922 + (TA)n Simple_repeat Simple_repeat 1 110 0 3 1074 3084 60 17 0 chrX 64220374 64220716 -102429580 + L1Md_F2 LINE L1 5243 5584 -299 3 1074 7824 63 0 4 chrX 64220717 64221717 -102428579 + L1Md_F2 LINE L1 5587 6582 0 3 1074 411 209 0 0 chrX 64222205 64222310 -102427986 + A-rich Low_complexity Low_complexity 1 105 0 3 1074 21 0 0 0 chrX 64223909 64223930 -102426366 + AT_rich Low_complexity Low_complexity 1 21 0 3 1074 5598 42 19 0 chrX 64224209 64224901 -102425395 + L1Md_F3 LINE L1 5880 6584 0 3 134 486 268 75 31 chrX 64225093 64225386 -102424910 + Lx8 LINE L1 5456 5806 -485 3 1075 321 273 47 0 chrX 64225385 64225471 -102424825 - L1_Mur3 LINE L1 -4481 1399 1312 3 1075 267 31 0 0 chrX 64225471 64225503 -102424793 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1075 321 268 39 55 chrX 64225503 64225740 -102424556 - L1_Mur3 LINE L1 -4569 1311 1073 3 1075 583 144 103 0 chrX 64226024 64226121 -102424175 + B1_Mus2 SINE Alu 41 147 0 3 1075 234 0 0 0 chrX 64226143 64226169 -102424127 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 1075 234 0 0 0 chrX 64226164 64226190 -102424106 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1075 21 0 0 0 chrX 64226664 64226685 -102423611 + AT_rich Low_complexity Low_complexity 1 21 0 3 1075 5597 59 0 4 chrX 64227256 64227965 -102422331 + L1Md_F2 LINE L1 5860 6565 -17 3 1075 2705 272 70 34 chrX 64228026 64229023 -102421273 + Lx8 LINE L1 6298 7330 -143 3 1075 253 272 23 58 chrX 64229155 64229241 -102421055 + MLT1A0 LTR MaLR 236 318 -47 3 1075 488 93 0 13 chrX 64229360 64229436 -102420860 + (TG)n Simple_repeat Simple_repeat 1 75 0 3 1075 212 400 0 0 chrX 64229959 64230039 -102420257 - MIR SINE MIR -69 139 60 3 1075 6035 82 119 3 chrX 64230424 64231360 -102418936 - L1_Mus3 LINE L1 -3 6635 5592 3 1075 5610 136 32 12 chrX 64231372 64232337 -102417959 - Lx2A1 LINE L1 -347 6661 5678 3 1075 1033 261 102 23 chrX 64232435 64232817 -102417479 + MTD LTR MaLR 1 405 -14 3 1075 189 0 0 0 chrX 64232953 64232974 -102417322 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 3 1075 22 0 0 0 chrX 64233382 64233404 -102416892 + AT_rich Low_complexity Low_complexity 1 22 0 3 1075 488 282 115 27 chrX 64233464 64233690 -102416606 + MLT1F2 LTR MaLR 323 555 -5 3 1075 8558 145 10 9 chrX 64233768 64235918 -102414378 + Lx2 LINE L1 4844 6997 0 3 1075 944 41 8 0 chrX 64236365 64236486 -102413810 + (TTC)n Simple_repeat Simple_repeat 2 123 0 3 1075 2632 146 14 2 chrX 64236827 64237246 -102413050 - Lx4A LINE L1 -4 7054 6631 3 1075 4474 153 19 10 chrX 64237391 64238096 -102412200 + RMER19A LTR ERVK 1 717 -20 3 1075 3940 70 0 2 chrX 64238096 64238598 -102411698 + L1_Mus2 LINE L1 6065 6565 -1 3 1075 4474 153 19 10 chrX 64238598 64238612 -102411684 + RMER19A LTR ERVK 718 727 -10 3 1075 264 193 0 0 chrX 64238626 64238683 -102411613 + MYSERV6-int LTR ERVK 675 731 -8228 3 1075 3370 87 8 2 chrX 64238687 64239158 -102411138 + L1_Mus4 LINE L1 6159 6632 -4 3 1075 234 217 0 32 chrX 64239517 64239579 -102410717 + GA-rich Low_complexity Low_complexity 2 61 0 3 1075 269 173 0 19 chrX 64240169 64240222 -102410074 - L1MC1 LINE L1 -167 6166 6115 3 1075 335 331 64 13 chrX 64240354 64240510 -102409786 + MIRb SINE MIR 105 268 0 3 1075 194 271 0 0 chrX 64241195 64241243 -102409053 - L2 LINE L2 -1288 2131 2084 3 1075 227 274 91 40 chrX 64243075 64243174 -102407122 + MIRc SINE MIR 136 239 -29 3 1075 1143 317 11 3 chrX 64243475 64243757 -102406539 - B4A SINE B4 -8 284 1 3 1075 864 245 177 39 chrX 64243785 64243864 -102406432 + ORR1E LTR MaLR 1 83 -276 3 1075 1498 214 96 6 chrX 64243864 64244207 -102406089 - ORR1D1 LTR MaLR 0 374 1 3 1075 864 232 134 34 chrX 64244207 64244445 -102405851 + ORR1E LTR MaLR 84 370 0 3 1075 506 287 78 0 chrX 64244561 64244690 -102405606 + MER96 DNA hAT 1 139 -36 3 1075 255 254 233 23 chrX 64244926 64245055 -102405241 - MIRb SINE MIR 0 268 113 3 1075 607 299 35 15 chrX 64245293 64245490 -102404806 + B3 SINE B2 1 201 -15 3 1075 632 294 62 16 chrX 64245518 64245822 -102404474 + L1_Mur3 LINE L1 2454 2771 -3109 3 1075 37 81 0 0 chrX 64246135 64246221 -102404075 + AT_rich Low_complexity Low_complexity 1 86 0 3 1075 1169 272 28 9 chrX 64246398 64246721 -102403575 - Lx7 LINE L1 -454 7242 6914 3 1075 646 286 5 0 chrX 64247296 64247485 -102402811 + Lx5 LINE L1 6174 6363 -687 3 1075 1166 269 36 33 chrX 64247535 64247927 -102402369 + Lx6 LINE L1 7068 7460 0 3 1075 294 96 39 0 chrX 64248403 64248455 -102401841 + URR1B DNA MER1_type 86 139 -86 3 1075 2658 148 62 29 chrX 64248469 64248892 -102401404 - RMER17A2 LTR ERVK -13 893 451 3 1075 444 37 0 0 chrX 64248892 64248946 -102401350 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 1075 2658 185 86 58 chrX 64248946 64249295 -102401001 - RMER17A2 LTR ERVK -456 450 1 3 1075 588 144 0 20 chrX 64249295 64249393 -102400903 + URR1B DNA MER1_type 130 225 0 3 1075 1352 161 143 7 chrX 64249646 64250101 -102400195 + Lx6 LINE L1 4103 4686 -1200 3 1075 2861 178 23 10 chrX 64250101 64250701 -102399595 + Lx6 LINE L1 5321 5930 -1530 3 1075 3359 162 24 0 chrX 64250701 64251292 -102399004 - Lx2 LINE L1 -38 6959 6355 3 1075 329 174 48 80 chrX 64251349 64251474 -102398822 - Lx9 LINE L1 -7 7637 7517 3 1075 350 338 151 38 chrX 64252053 64252397 -102397899 - L2a LINE L2 0 3426 3044 3 1075 401 224 92 71 chrX 64252531 64252771 -102397525 - Lx9 LINE L1 -14 7630 7386 3 1075 944 276 16 74 chrX 64252796 64253160 -102397136 + Lx9 LINE L1 7006 7348 -296 3 1075 778 284 24 5 chrX 64253970 64254179 -102396117 - B3 SINE B2 0 216 4 3 1075 768 284 62 5 chrX 64254482 64254677 -102395619 - B3 SINE B2 0 216 11 3 1075 370 269 108 24 chrX 64254841 64255054 -102395242 - Charlie5 DNA MER1_type -40 2584 2354 4 1075 278 233 56 180 chrX 64255294 64255472 -102394824 + MT2A LTR ERVL 1 156 -377 4 1075 695 260 107 0 chrX 64255515 64255711 -102394585 + Lx8 LINE L1 7109 7325 -148 4 1075 368 254 23 38 chrX 64255608 64255739 -102394557 + RMER1C Other Other 1097 1225 -117 4 1075 1138 213 39 4 chrX 64255750 64256009 -102394287 + Lx7 LINE L1 6848 7115 -581 4 1075 315 364 42 8 chrX 64256242 64256361 -102393935 + MT2A LTR ERVL 230 352 -181 4 1075 507 17 0 0 chrX 64256382 64256442 -102393854 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 1075 369 274 120 8 chrX 64256515 64256640 -102393656 - MER5A1 DNA MER1_type -26 140 2 4 1075 21 0 0 0 chrX 64256881 64256902 -102393394 + AT_rich Low_complexity Low_complexity 1 21 0 4 1075 2598 46 0 3 chrX 64256902 64257226 -102393070 - L1Md_T LINE L1 0 6582 6260 4 1075 232 203 0 33 chrX 64257364 64257425 -102392871 + CT-rich Low_complexity Low_complexity 2 60 0 4 1075 1244 13 13 0 chrX 64257427 64257576 -102392720 + (TCTCCC)n Simple_repeat Simple_repeat 1 151 0 4 1075 351 217 126 44 chrX 64259104 64259239 -102391057 - Charlie21a DNA MER1_type -471 742 597 4 1075 232 331 72 36 chrX 64259312 64259450 -102390846 - Charlie21a DNA MER1_type -729 484 342 4 1075 657 289 104 0 chrX 64259532 64259743 -102390553 + MLT1A0 LTR MaLR 130 362 -3 4 1075 348 94 0 0 chrX 64260758 64260811 -102389485 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1075 233 329 0 12 chrX 64260931 64261014 -102389282 + GA-rich Low_complexity Low_complexity 2 83 0 4 1075 591 291 88 18 chrX 64261148 64261384 -102388912 + MER74B LTR ERVL 181 483 -139 4 1075 270 336 0 0 chrX 64261482 64261589 -102388707 + L2 LINE L2 1953 2059 -1360 4 1075 2336 94 44 6 chrX 64262178 64262519 -102387777 - L1_Mus4 LINE L1 0 6636 6283 4 1075 3773 81 11 0 chrX 64262520 64263051 -102387245 + L1_Mus4 LINE L1 5704 6240 -396 4 1075 212 69 100 33 chrX 64263069 64263129 -102387167 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 4 1075 721 328 39 83 chrX 64263771 64264107 -102386189 - LTR41 LTR ERVL -426 342 22 4 1075 213 396 50 10 chrX 64264209 64264408 -102385888 + L2 LINE L2 2501 2707 -712 4 1075 1591 260 44 2 chrX 64265029 64265526 -102384770 - Lx9 LINE L1 -7 7637 7120 4 1075 200 362 29 93 chrX 64265592 64265732 -102384564 - L3 LINE CR1 -42 4447 4317 4 1075 267 351 81 60 chrX 64265833 64266018 -102384278 + MIRb SINE MIR 72 260 -8 4 1075 33716 35 1 0 chrX 64266446 64272595 -102377701 + L1Md_T LINE L1 1 5589 -297 4 1075 8980 6 0 4 chrX 64272595 64273643 -102376653 + L1Md_T LINE L1 5590 6585 0 4 1075 4599 171 39 12 chrX 64273897 64275641 -102374655 + L1Md_F LINE L1 239 2013 -1901 4 1075 266 156 0 0 chrX 64275657 64275702 -102374594 + L1Md_F2 LINE L1 293 337 -6282 4 1075 30227 67 1 0 chrX 64275695 64280626 -102369670 + L1Md_F2 LINE L1 563 5589 -297 4 1075 7126 55 68 11 chrX 64280627 64281564 -102368732 + L1Md_F2 LINE L1 5591 6581 -4 4 1075 231 36 0 0 chrX 64281577 64281605 -102368691 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1075 19929 136 13 4 chrX 64281642 64284933 -102365363 + L1Md_F LINE L1 2001 5321 -562 4 1075 489 32 16 0 chrX 64284935 64284997 -102365299 + L1_Mus2 LINE L1 56 118 -6404 4 1075 4640 0 0 0 chrX 64284987 64285513 -102364783 + L1Md_Gf LINE L1 617 1142 -5380 4 1075 35478 47 0 65 chrX 64285479 64289863 -102360433 + L1_Mus2 LINE L1 1206 5589 -297 4 1075 8851 7 0 0 chrX 64289863 64290847 -102359449 + L1Md_T LINE L1 5587 6570 -12 4 1075 35478 60 1 31 chrX 64290847 64292152 -102358144 + L1_Mus2 LINE L1 5590 6569 0 4 1075 257 291 0 97 chrX 64292306 64292420 -102357876 + L1M4 LINE L1 5777 5879 -305 4 1075 390 21 0 0 chrX 64292893 64292940 -102357356 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1075 216 286 12 49 chrX 64293007 64293088 -102357208 + CT-rich Low_complexity Low_complexity 2 79 0 4 1075 215 274 0 0 chrX 64293088 64293139 -102357157 + (CATG)n Simple_repeat Simple_repeat 2 52 0 4 1075 839 339 30 0 chrX 64293158 64293388 -102356908 - B4A SINE B4 -48 244 8 4 1075 419 301 7 70 chrX 64294099 64294242 -102356054 + B3A SINE B2 64 197 -1 4 1075 251 276 149 0 chrX 64294581 64294668 -102355628 + MIR3 SINE MIR 108 207 -1 4 1075 574 269 70 94 chrX 64294719 64295006 -102355290 - B4 SINE B4 -11 281 2 4 1075 1143 178 26 9 chrX 64295198 64295425 -102354871 + Lx5 LINE L1 6817 7047 -3 4 1075 215 357 134 37 chrX 64296169 64296437 -102353859 - L2c LINE L2 -3 3384 3091 4 1075 214 158 0 0 chrX 64296659 64296697 -102353599 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1075 539 280 43 91 chrX 64296716 64296924 -102353372 - B4A SINE B4 -94 198 1 4 1075 341 284 21 0 chrX 64297089 64297184 -102353112 - L2 LINE L2 -2031 1388 1292 4 1075 4817 102 33 70 chrX 64297206 64297972 -102352324 - RMER19A LTR ERVK 0 737 1 4 1075 189 0 0 0 chrX 64298229 64298250 -102352046 + (TC)n Simple_repeat Simple_repeat 2 22 0 4 1075 752 300 68 32 chrX 64298323 64298602 -102351694 - B4 SINE B4 -3 289 1 4 1075 332 320 0 40 chrX 64298602 64298703 -102351593 + MER58B DNA MER1_type 220 316 -25 4 1075 5091 77 4 6 chrX 64299387 64300069 -102350227 + L1Md_F2 LINE L1 5879 6559 -23 4 1075 729 0 0 0 chrX 64300069 64300150 -102350146 + (GAA)n Simple_repeat Simple_repeat 1 81 0 4 1075 257 328 151 28 chrX 64300688 64300867 -102349429 + MLT1A LTR MaLR 34 234 -140 4 1075 2096 122 16 3 chrX 64300874 64301196 -102349100 + IAPLTR1a_Mm LTR ERVK 1 326 -11 4 1075 11158 93 92 28 chrX 64301197 64303847 -102346449 + IAPEz-int LTR ERVK 1 2774 -3707 4 1075 3102 20 0 0 chrX 64303845 64304202 -102346094 + IAPEz-int LTR ERVK 4001 4357 -2124 4 1075 6558 26 4 12 chrX 64304193 64304970 -102345326 + IAPEz-int LTR ERVK 5709 6479 -2 4 1075 2096 122 16 3 chrX 64304972 64305294 -102345002 + IAPLTR1a_Mm LTR ERVK 1 326 -11 4 1075 868 188 91 10 chrX 64305495 64305694 -102344602 - B3 SINE B2 0 216 2 4 1075 1809 241 24 38 chrX 64305840 64306292 -102344004 + RMER1A Other Other 167 612 -418 4 1075 761 131 31 0 chrX 64306312 64306442 -102343854 - L1_Mur2 LINE L1 -1569 4308 4175 4 1075 8625 134 38 7 chrX 64306420 64308700 -102341596 + Lx LINE L1 4289 6649 -5 4 1075 1380 204 61 14 chrX 64308720 64309013 -102341283 + RMER1B Other Other 723 1029 -37 4 1075 2971 191 126 3 chrX 64309208 64309812 -102340484 + RLTR33 LTR ERVK 1 678 0 4 1075 255 337 50 10 chrX 64310220 64310319 -102339977 + ORR1E LTR MaLR 9 111 -248 4 1075 1718 60 0 5 chrX 64310785 64311004 -102339292 - L1_Mm LINE L1 -1252 4631 4414 4 1075 486 313 0 51 chrX 64311320 64311458 -102338838 - B1F SINE Alu -7 142 12 4 1075 25 51 0 0 chrX 64311729 64311768 -102338528 + AT_rich Low_complexity Low_complexity 1 39 0 4 1075 284 329 40 0 chrX 64312919 64312995 -102337301 - B1F1 SINE Alu -61 88 10 4 1075 309 77 0 0 chrX 64313034 64313073 -102337223 + (TCCC)n Simple_repeat Simple_repeat 3 41 0 4 1075 554 75 12 0 chrX 64313073 64313153 -102337143 + (TTTC)n Simple_repeat Simple_repeat 1 81 0 4 1075 233 167 56 83 chrX 64313255 64313327 -102336969 - Zaphod DNA Tip100 -2867 1164 1095 4 1075 21 36 0 0 chrX 64313975 64314003 -102336293 + AT_rich Low_complexity Low_complexity 1 28 0 4 1075 21 0 0 0 chrX 64314067 64314088 -102336208 + AT_rich Low_complexity Low_complexity 1 21 0 4 1075 276 328 180 10 chrX 64314090 64314284 -102336012 - MIR SINE MIR -15 247 21 4 1075 780 11 0 0 chrX 64315116 64315205 -102335091 + (TTC)n Simple_repeat Simple_repeat 1 89 0 4 1075 191 150 23 70 chrX 64315322 64315365 -102334931 + MIRm SINE MIR 96 136 -140 4 1075 26 50 0 0 chrX 64317146 64317186 -102333110 + AT_rich Low_complexity Low_complexity 1 40 0 4 1075 210 143 0 0 chrX 64317252 64317287 -102333009 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1075 1152 74 0 0 chrX 64317812 64318043 -102332253 + (TTTC)n Simple_repeat Simple_repeat 1 231 0 4 1075 5070 97 6 0 chrX 64318067 64318791 -102331505 - L1_Mus3 LINE L1 -4 6634 5907 4 1075 418 325 6 13 chrX 64318833 64318989 -102331307 + L1VL4 LINE L1 172 326 -5976 4 1075 344 319 84 6 chrX 64319272 64319439 -102330857 + MIRb SINE MIR 86 265 -3 4 1075 341 318 124 0 chrX 64320988 64321117 -102329179 - MIR SINE MIR -8 254 110 4 1075 204 188 0 81 chrX 64322822 64322909 -102327387 + T-rich Low_complexity Low_complexity 4 83 0 4 1075 230 0 33 0 chrX 64323227 64323257 -102327039 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1075 1065 87 0 0 chrX 64323257 64323395 -102326901 - B1_Mus2 SINE Alu -9 138 1 4 1075 2158 186 0 49 chrX 64323546 64323975 -102326321 + L1VL1 LINE L1 221 628 -5794 4 1075 5721 101 10 36 chrX 64323971 64324693 -102325603 + L1_Mus2 LINE L1 3524 4233 -1650 4 1075 1103 56 21 0 chrX 64324693 64324835 -102325461 - B1_Mm SINE Alu -2 145 1 4 1075 5721 101 10 36 chrX 64324835 64325032 -102325264 + L1_Mus2 LINE L1 4234 4419 -1464 4 1075 7293 118 35 1 chrX 64325029 64326218 -102324078 + MusHAL1 LINE L1 1202 2431 -281 4 1075 7137 118 58 38 chrX 64326224 64328022 -102322274 + L1_Mus2 LINE L1 4734 6566 0 4 1075 21 0 0 0 chrX 64328526 64328547 -102321749 + AT_rich Low_complexity Low_complexity 1 21 0 4 1075 2139 65 101 0 chrX 64328623 64328930 -102321366 + ORR1A1 LTR MaLR 1 338 -8 4 1075 2814 63 15 30 chrX 64329061 64329429 -102320867 + MTB LTR MaLR 1 364 -36 4 1075 3017 26 0 0 chrX 64329429 64329775 -102320521 + ORR1A0 LTR MaLR 1 346 0 4 1075 2814 63 15 30 chrX 64329775 64329812 -102320484 + MTB LTR MaLR 365 400 0 4 1075 1284 282 65 26 chrX 64329823 64330315 -102319981 - L1MB3 LINE L1 -352 5831 5321 4 1075 972 0 0 0 chrX 64331998 64332106 -102318190 + (TTC)n Simple_repeat Simple_repeat 1 108 0 4 1075 271 307 34 74 chrX 64332957 64333105 -102317191 - MIRb SINE MIR 0 268 127 4 1075 346 237 43 153 chrX 64333143 64333352 -102316944 - Lx9 LINE L1 -590 7054 6869 4 1075 787 238 16 19 chrX 64333345 64333648 -102316648 + Lx9 LINE L1 7291 7632 -12 4 1075 246 333 0 0 chrX 64334220 64334283 -102316013 + MER20 DNA MER1_type 6 68 -151 4 1075 414 0 0 0 chrX 64334754 64334800 -102315496 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1075 243 0 0 0 chrX 64336080 64336107 -102314189 + (TAA)n Simple_repeat Simple_repeat 3 29 0 4 1075 1680 100 0 20 chrX 64336107 64336352 -102313944 + L1_Mus1 LINE L1 6328 6567 0 4 1075 5676 134 21 7 chrX 64336495 64337405 -102312891 - Lx2 LINE L1 -1 6996 6074 4 1075 191 261 0 0 chrX 64337649 64337695 -102312601 + L3 LINE CR1 3725 3770 -719 4 1075 3536 141 29 8 chrX 64337840 64338435 -102311861 + Lx4A LINE L1 642 1248 -5838 4 1075 7419 66 9 11 chrX 64338437 64339417 -102310879 + L1_Mus2 LINE L1 5587 6564 -2 4 1075 4892 110 94 123 chrX 64339426 64339605 -102310691 + Lx4A LINE L1 1244 1437 -4440 4 1075 684 109 234 0 chrX 64339605 64339733 -102310563 - B2_Mm2 SINE B2 -4 191 34 5 1075 4892 110 94 123 chrX 64339733 64340609 -102309687 + Lx4A LINE L1 1438 2392 -3485 4 1075 12337 133 141 11 chrX 64340594 64340875 -102309421 + Lx4A LINE L1 3196 3474 -2403 4 1075 387 0 0 0 chrX 64340875 64340918 -102309378 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 5 1075 12337 143 100 10 chrX 64340918 64344149 -102306147 + Lx4A LINE L1 3475 7047 -11 4 1075 673 0 22 22 chrX 64344149 64344238 -102306058 + (GAAA)n Simple_repeat Simple_repeat 3 91 0 5 1075 304 299 27 72 chrX 64344255 64344441 -102305855 + MLT1B LTR MaLR 157 344 -46 5 1075 983 99 202 6 chrX 64344576 64344739 -102305557 + B2_Mm2 SINE B2 1 195 0 5 1075 228 203 270 0 chrX 64345139 64345213 -102305083 + LTR33 LTR ERVL 402 495 -20 5 1075 27 49 0 0 chrX 64346483 64346524 -102303772 + AT_rich Low_complexity Low_complexity 1 41 0 5 1075 1129 81 0 0 chrX 64346551 64346699 -102303597 - B1_Mus1 SINE Alu 0 148 1 5 1075 315 175 0 0 chrX 64346707 64346770 -102303526 + L1MEc LINE L1 711 773 -5627 5 1075 1040 90 0 0 chrX 64346992 64347125 -102303171 + B1_Mus2 SINE Alu 3 135 -12 5 1075 342 0 0 0 chrX 64347125 64347163 -102303133 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 5 1075 738 256 53 134 chrX 64347220 64347473 -102302823 + B4 SINE B4 32 266 -26 5 1075 684 24 0 0 chrX 64347473 64347555 -102302741 + (TC)n Simple_repeat Simple_repeat 1 82 0 5 1075 738 256 53 134 chrX 64347555 64347585 -102302711 + B4 SINE B4 267 292 0 5 1075 939 295 52 49 chrX 64348642 64349067 -102301229 - MER21-int LTR ERV1 -1471 2720 2295 5 1075 22 0 0 0 chrX 64349229 64349251 -102301045 + AT_rich Low_complexity Low_complexity 1 22 0 5 1075 307 281 122 51 chrX 64349323 64349732 -102300564 + L1MEc LINE L1 3855 4292 -2027 5 1075 4303 224 94 8 chrX 64349782 64350736 -102299560 - Lx6 LINE L1 -1 7459 6424 5 1075 477 347 101 70 chrX 64350762 64351472 -102298824 - RMER13A LTR ERVK -110 750 19 5 1075 3218 193 34 36 chrX 64351474 64352361 -102297935 - Lx6 LINE L1 -1039 6421 5531 5 1075 422 179 191 15 chrX 64352358 64352494 -102297802 + L1_Mur3 LINE L1 3003 3162 -2718 5 1075 455 260 101 25 chrX 64352506 64352652 -102297644 + MLT1B LTR MaLR 211 377 -13 5 1075 27 62 0 0 chrX 64352675 64352723 -102297573 + AT_rich Low_complexity Low_complexity 1 48 0 5 1075 5085 120 5 66 chrX 64352794 64353458 -102296838 + L1VL4 LINE L1 184 805 -5497 5 1075 2142 105 10 0 chrX 64353458 64353771 -102296525 + L1_Mus3 LINE L1 6323 6638 0 5 1075 5085 104 1 28 chrX 64353771 64354037 -102296259 + L1VL4 LINE L1 806 1057 -2502 5 1075 1525 99 0 0 chrX 64354035 64354256 -102296040 - MusHAL1 LINE L1 -1244 1468 1248 5 1075 323 102 0 33 chrX 64354256 64354317 -102295979 - 4.5SRNA scRNA scRNA -4 90 32 5 1075 240 145 156 31 chrX 64354264 64354328 -102295968 - PB1 SINE Alu -31 96 25 5 1075 1255 118 0 68 chrX 64354328 64354564 -102295732 + L1VL4 LINE L1 2323 2542 -1017 5 1075 1314 95 16 0 chrX 64354576 64354766 -102295530 - L1_Mus1 LINE L1 -1 6566 6374 5 1075 12827 119 304 24 chrX 64354766 64356242 -102294054 - L1VL4 LINE L1 -993 4893 2619 5 1075 405 0 0 0 chrX 64356242 64356287 -102294009 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 134 12827 154 255 27 chrX 64356287 64358247 -102292049 - L1VL4 LINE L1 -3268 2618 495 5 1076 320 214 33 175 chrX 64358263 64358420 -102291876 - L1VL1 LINE L1 -6068 354 178 5 1076 3063 324 64 25 chrX 64358734 64358770 -102291526 + Lx8 LINE L1 6036 6070 -1403 5 1076 1394 187 163 15 chrX 64358770 64359096 -102291200 - ORR1D1 LTR MaLR 0 374 1 5 1076 3063 324 64 25 chrX 64359096 64360435 -102289861 + Lx8 LINE L1 6071 7464 -9 5 1076 26 50 0 0 chrX 64360438 64360478 -102289818 + AT_rich Low_complexity Low_complexity 1 40 0 5 1076 23 0 0 0 chrX 64362120 64362143 -102288153 + AT_rich Low_complexity Low_complexity 1 23 0 5 1076 821 272 142 28 chrX 64362307 64362700 -102287596 + Lx8 LINE L1 6797 7234 -239 5 1076 412 81 27 0 chrX 64362703 64362777 -102287519 + (TTTTTG)n Simple_repeat Simple_repeat 3 78 0 5 1076 287 314 67 63 chrX 64363246 64363484 -102286812 - Lx8 LINE L1 -10 7463 7225 5 1076 4856 75 3 0 chrX 64363479 64364320 -102285976 - L1_Mus1 LINE L1 -336 6231 5387 5 1076 2481 96 42 0 chrX 64364320 64364673 -102285623 + L1_Mus1 LINE L1 6199 6566 -1 5 1076 822 309 0 0 chrX 64364766 64364967 -102285329 - Lx8 LINE L1 -235 7238 7038 5 1076 525 237 17 8 chrX 64364987 64365106 -102285190 + MTD LTR MaLR 1 120 -299 5 1076 8254 39 6 3 chrX 64365117 64366476 -102283820 - L1Md_F3 LINE L1 -1 6583 5221 5 1076 865 272 120 8 chrX 64366476 64366735 -102283561 + MTD LTR MaLR 118 405 -14 5 1076 510 132 9 19 chrX 64366887 64366995 -102283301 - L1Md_F2 LINE L1 0 6582 6476 5 1076 299 63 15 45 chrX 64368471 64368537 -102281759 + (CAAAA)n Simple_repeat Simple_repeat 5 68 0 5 1076 30 0 0 0 chrX 64368704 64368734 -102281562 + AT_rich Low_complexity Low_complexity 1 30 0 5 1076 544 248 165 59 chrX 64368807 64368847 -102281449 - RMER21B LTR ERV1 -275 567 528 5 1076 267 31 0 0 chrX 64368847 64368879 -102281417 + (TGG)n Simple_repeat Simple_repeat 1 32 0 5 1076 544 266 134 55 chrX 64368879 64369180 -102281116 - RMER21B LTR ERV1 -315 527 108 5 1076 299 333 0 93 chrX 64369782 64369911 -102280385 - LTR33 LTR ERVL -177 338 222 5 1076 489 80 0 0 chrX 64369986 64370061 -102280235 + (TG)n Simple_repeat Simple_repeat 2 76 0 5 1076 218 372 10 10 chrX 64370155 64370258 -102280038 - B1_Mm SINE Alu -15 132 30 5 1076 210 136 0 0 chrX 64370994 64371038 -102279258 + (T)n Simple_repeat Simple_repeat 1 44 0 5 1076 1153 66 41 12 chrX 64371077 64371246 -102279050 + RMER17D2 LTR ERVK 1 174 -635 5 1076 243 188 58 25 chrX 64371265 64371385 -102278911 + (TA)n Simple_repeat Simple_repeat 2 125 0 5 1076 2242 253 83 70 chrX 64371405 64372429 -102277867 + RMER17B LTR ERVK 2 899 -9 5 1076 49 32 0 0 chrX 64372448 64372511 -102277785 + AT_rich Low_complexity Low_complexity 1 63 0 5 1076 1295 222 191 40 chrX 64372668 64373138 -102277158 - RMER4B LTR ERVK -27 558 18 5 1076 370 314 46 61 chrX 64373832 64374029 -102276267 - ORR1E LTR MaLR -2 357 164 5 1076 342 205 0 0 chrX 64374029 64374112 -102276184 + GA-rich Low_complexity Low_complexity 2 84 0 5 1076 434 319 25 89 chrX 64374114 64374317 -102275979 - ORR1E LTR MaLR -164 195 6 5 1076 3514 46 0 14 chrX 64374471 64374914 -102275382 + L1Md_F2 LINE L1 6146 6582 0 5 1076 785 104 0 7 chrX 64374922 64375057 -102275239 + L1Md_F2 LINE L1 6444 6577 -5 5 1076 233 372 49 0 chrX 64375452 64375554 -102274742 - MLT1H1 LTR MaLR -374 181 75 5 1076 584 331 0 0 chrX 64375839 64375990 -102274306 - ID_B1 SINE B4 -2 222 72 5 1076 345 47 0 0 chrX 64375993 64376036 -102274260 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1076 271 330 26 9 chrX 64376383 64376499 -102273797 + MIRb SINE MIR 59 176 -92 5 1076 2899 56 3 18 chrX 64377255 64377638 -102272658 + L1Md_F3 LINE L1 6208 6584 0 5 1076 815 275 129 35 chrX 64378655 64378913 -102271383 + ORR1D2 LTR MaLR 1 291 -79 5 1076 243 0 0 0 chrX 64378913 64378940 -102271356 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1076 815 301 87 8 chrX 64378940 64378968 -102271328 + ORR1D2 LTR MaLR 292 320 -50 5 1076 341 321 35 14 chrX 64379813 64379977 -102270319 - B3 SINE B2 -17 199 1 5 1076 703 197 275 0 chrX 64380213 64380446 -102269850 + Lx9 LINE L1 7344 7640 -4 5 1076 3475 129 39 12 chrX 64380469 64381063 -102269233 - Lx2 LINE L1 0 5883 5274 5 1076 6724 127 18 31 chrX 64381064 64382173 -102268123 + Lx2 LINE L1 5902 6996 -1 5 1076 215 302 45 34 chrX 64382242 64382331 -102267965 + B1_Mur2 SINE Alu 59 148 -1 5 1076 330 26 0 0 chrX 64382333 64382372 -102267924 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1076 202 211 0 0 chrX 64382385 64382423 -102267873 + A-rich Low_complexity Low_complexity 1 38 0 5 1076 912 279 4 4 chrX 64382577 64382804 -102267492 + MT2A LTR ERVL 1 227 -306 5 1076 456 296 76 22 chrX 64382821 64383211 -102267085 - Lx9 LINE L1 -89 7555 7110 5 1076 1119 220 117 15 chrX 64383207 64383599 -102266697 + L1_Rod LINE L1 5096 5527 -320 5 1076 31 26 0 0 chrX 64383623 64383661 -102266635 + AT_rich Low_complexity Low_complexity 1 38 0 5 1076 352 195 39 13 chrX 64383699 64383777 -102266519 + L1_Rod LINE L1 5538 5617 -230 5 1076 1959 197 19 5 chrX 64386207 64386580 -102263716 - ORR1C1 LTR MaLR 0 378 1 5 1076 642 227 0 74 chrX 64386580 64386723 -102263573 - ORR1C1-int LTR MaLR -21 1488 1352 5 1076 532 109 99 0 chrX 64386723 64386824 -102263472 + L1Md_F2 LINE L1 6471 6581 -1 5 1076 642 227 0 74 chrX 64386824 64386870 -102263426 - ORR1C1-int LTR MaLR -158 1351 1313 5 1076 2482 178 60 0 chrX 64386870 64387066 -102263230 - L1_Mur2 LINE L1 -2174 3703 3484 5 1076 660 26 0 0 chrX 64387066 64387144 -102263152 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 5 1076 2482 178 60 0 chrX 64387144 64387446 -102262850 - L1_Mur2 LINE L1 -2394 3483 3176 5 1076 2704 198 16 0 chrX 64387441 64387991 -102262305 + L1_Mur1 LINE L1 4642 5200 -686 5 1076 25622 112 25 18 chrX 64388010 64389621 -102260675 - L1_Mus2 LINE L1 -1 6565 4885 5 1076 226 153 62 92 chrX 64389621 64389686 -102260610 + RMER20A LTR ERVK 186 248 -268 5 1076 25622 112 25 18 chrX 64389686 64390265 -102260031 - L1_Mus2 LINE L1 -1 4884 4279 5 1076 207 0 0 0 chrX 64390265 64390288 -102260008 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 1076 25622 128 22 28 chrX 64390288 64391966 -102258330 - L1_Mus2 LINE L1 -1605 4278 2630 5 1076 6133 23 0 0 chrX 64391966 64392666 -102257630 + L1Md_A LINE L1 5880 6579 -3 5 1076 25622 169 41 63 chrX 64392666 64395247 -102255049 - L1_Mus2 LINE L1 -3254 2629 115 5 1076 714 24 0 0 chrX 64395347 64395431 -102254865 + (TTC)n Simple_repeat Simple_repeat 2 85 0 5 1076 853 251 3 89 chrX 64395456 64395793 -102254503 - L1VL1 LINE L1 -5934 484 2 5 1076 1610 150 7 32 chrX 64395795 64395874 -102254422 + L1_Mm LINE L1 5190 5268 -615 5 1076 3124 71 2 5 chrX 64395874 64396284 -102254012 + L1_Mus2 LINE L1 6158 6566 0 5 1076 1610 150 7 32 chrX 64396284 64396514 -102253782 + L1_Mm LINE L1 5269 5491 -392 5 1076 37492 16 2 18 chrX 64396514 64402327 -102247969 + Lx2 LINE L1 1 5586 -297 5 1076 9028 4 0 0 chrX 64402327 64403323 -102246973 + L1Md_A LINE L1 5587 6582 0 5 1076 37492 104 19 14 chrX 64403323 64404824 -102245472 + Lx2 LINE L1 5587 6996 -1 5 1076 1063 214 53 89 chrX 64404825 64405107 -102245189 - ORR1B2 LTR MaLR -95 272 1 5 1076 2687 247 107 10 chrX 64405111 64405897 -102244399 + Lx6 LINE L1 6137 6998 -462 5 1076 3083 144 60 2 chrX 64405888 64406484 -102243812 + L1_Mur2 LINE L1 3300 3930 -1947 5 1076 306 293 8 31 chrX 64406494 64406621 -102243675 + (CATATA)n Simple_repeat Simple_repeat 1 124 0 5 1076 31 58 0 0 chrX 64406889 64406941 -102243355 + AT_rich Low_complexity Low_complexity 1 52 0 5 1076 25 65 0 0 chrX 64407021 64407067 -102243229 + AT_rich Low_complexity Low_complexity 1 46 0 5 1076 3338 44 0 7 chrX 64408841 64409249 -102241047 - L1Md_F2 LINE L1 -14 6568 6164 5 1076 496 375 0 38 chrX 64410695 64410853 -102239443 + B3A SINE B2 5 156 -42 5 1076 317 109 16 0 chrX 64410854 64410918 -102239378 + (TC)n Simple_repeat Simple_repeat 2 66 0 5 1076 216 0 0 0 chrX 64410918 64410942 -102239354 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1076 453 317 10 91 chrX 64411241 64411439 -102238857 - B4 SINE B4 0 292 111 5 1076 189 0 0 0 chrX 64411449 64411470 -102238826 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 6 1076 401 248 27 7 chrX 64411470 64411620 -102238676 - Lx9 LINE L1 -13 7631 7479 6 1076 258 379 21 10 chrX 64411621 64411717 -102238579 - B4A SINE B4 -195 97 1 5 1076 202 232 0 18 chrX 64411721 64411778 -102238518 + T-rich Low_complexity Low_complexity 3 58 0 6 1076 5789 31 0 0 chrX 64411899 64412575 -102237721 + L1Md_T LINE L1 5906 6581 -1 6 1076 764 162 0 7 chrX 64413390 64413539 -102236757 + CT-rich Low_complexity Low_complexity 2 149 0 6 1076 415 267 161 75 chrX 64413559 64413826 -102236470 - L1ME1 LINE L1 -207 5972 5683 6 1076 333 310 48 22 chrX 64414044 64414216 -102236080 - L1MC LINE L1 -911 5235 5057 6 1076 6560 103 13 6 chrX 64414221 64415448 -102234848 - L1_Mus2 LINE L1 0 6566 5318 6 1076 5269 197 17 70 chrX 64415440 64415975 -102234321 - L1Md_F LINE L1 -3216 2673 2126 6 1076 651 98 98 0 chrX 64415975 64416077 -102234219 - B1_Mm SINE Alu 0 147 36 6 1076 300 240 12 62 chrX 64416009 64416089 -102234207 - RLTR25B LTR ERVK -525 503 428 6 1076 5269 197 17 70 chrX 64416089 64417532 -102232764 - L1Md_F LINE L1 -3216 2125 644 6 1076 1150 231 95 34 chrX 64417540 64417836 -102232460 - RLTR46 LTR ERVK -6 314 1 6 1076 678 120 0 0 chrX 64417836 64417944 -102232352 - MMERVK10C-int LTR ERVK 0 7581 7474 6 1076 2506 45 0 0 chrX 64417964 64418276 -102232020 - RLTR10-int LTR ERVK -190 1797 1486 6 1076 2191 166 17 2 chrX 64418279 64418762 -102231534 - MMERVK10C-int LTR ERVK -150 7363 6849 6 1076 1716 100 0 0 chrX 64418781 64419021 -102231275 - MMERVK10C-int LTR ERVK -1882 5699 5460 6 1076 427 149 27 0 chrX 64419004 64419078 -102231218 - MMERVK10C-int LTR ERVK -1460 5082 5007 6 1076 338 158 0 0 chrX 64419078 64419135 -102231161 - MMERVK10C-int LTR ERVK -6039 503 447 6 1076 2944 266 50 25 chrX 64419157 64420103 -102230193 - IAPEY3-int LTR ERVK -6177 1503 535 6 1076 360 252 41 69 chrX 64420154 64420299 -102229997 - IAPEY3-int LTR ERVK -7537 143 3 6 1076 1115 231 95 34 chrX 64420309 64420605 -102229691 - RLTR46 LTR ERVK -6 314 1 6 1076 449 264 117 58 chrX 64420607 64421001 -102229295 - L1Md_F LINE L1 -5868 751 335 6 1076 387 204 0 28 chrX 64420993 64421101 -102229195 - L1VL2 LINE L1 -6142 276 179 6 1076 362 315 30 94 chrX 64421179 64421382 -102228914 - L1MD LINE L1 -1836 4310 4121 6 1076 3056 219 18 15 chrX 64421605 64422278 -102228018 - Lx5 LINE L1 -257 6793 6119 6 1076 534 250 53 0 chrX 64422258 64422410 -102227886 + Lx5 LINE L1 5924 6083 -967 6 1076 285 29 0 0 chrX 64424676 64424710 -102225586 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1076 681 122 0 0 chrX 64424710 64424825 -102225471 + (GA)n Simple_repeat Simple_repeat 2 116 0 6 1076 10986 149 17 5 chrX 64425198 64428114 -102222182 - Lx LINE L1 0 6654 3702 6 1076 397 161 0 0 chrX 64428791 64428853 -102221443 + B3 SINE B2 4 65 -151 6 1076 1462 243 141 50 chrX 64429089 64429625 -102220671 + Lx7 LINE L1 6886 7467 -229 6 1076 1015 122 0 7 chrX 64429625 64429773 -102220523 - B1_Mus1 SINE Alu -1 147 1 6 1076 1462 243 141 50 chrX 64429773 64429960 -102220336 + Lx7 LINE L1 7468 7675 -21 6 1076 3968 98 15 92 chrX 64429969 64431118 -102219178 + Lx3_Mus LINE L1 5329 6349 -660 6 1076 629 349 84 0 chrX 64431558 64431916 -102218380 - Lx8 LINE L1 -29 7444 7057 6 1076 189 0 0 0 chrX 64431921 64431942 -102218354 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 6 1076 1809 326 31 31 chrX 64431985 64432867 -102217429 + Lx8 LINE L1 6106 6987 -486 6 1076 1347 124 0 5 chrX 64433271 64433482 -102216814 + L1VL1 LINE L1 31 240 -6182 6 1076 3153 85 6 0 chrX 64433487 64433958 -102216338 + L1_Mm LINE L1 2935 3408 -2475 6 1076 638 319 0 19 chrX 64434475 64434689 -102215607 + B3 SINE B2 3 212 -4 6 1076 3465 168 68 8 chrX 64435028 64435694 -102214602 - RMER6D LTR ERVK -14 706 1 6 1076 1158 283 79 23 chrX 64435694 64436084 -102214212 - RMER15 LTR ERVL -88 487 76 6 1076 285 297 39 10 chrX 64436398 64436500 -102213796 - MIRb SINE MIR -76 192 88 6 1076 260 351 70 63 chrX 64437296 64437317 -102212979 - MER5B DNA MER1_type -18 160 143 6 1076 509 311 126 0 chrX 64437317 64437507 -102212789 + B3 SINE B2 2 215 -1 6 1076 260 351 70 63 chrX 64437507 64437643 -102212653 - MER5B DNA MER1_type -36 142 2 6 1076 1116 249 50 32 chrX 64437655 64437933 -102212363 - ORR1D2 LTR MaLR 0 370 88 6 1076 435 118 0 0 chrX 64437962 64438038 -102212258 + (T)n Simple_repeat Simple_repeat 1 76 0 6 1076 5690 130 69 7 chrX 64438038 64438985 -102211311 - Lx3C LINE L1 0 6976 5972 6 1076 451 284 0 0 chrX 64438985 64439087 -102211209 - ORR1D2 LTR MaLR -268 102 1 6 1076 217 226 95 16 chrX 64439411 64439474 -102210822 + MIR SINE MIR 5 72 -190 6 1076 264 318 65 0 chrX 64440148 64440255 -102210041 + MIR SINE MIR 31 144 -64 6 1076 1226 254 52 38 chrX 64440264 64440787 -102209509 - Lx9 LINE L1 -1 7643 7114 6 1076 15241 157 33 16 chrX 64440828 64443523 -102206773 - Lx LINE L1 -6 6648 3875 6 1076 253 83 0 0 chrX 64443523 64443559 -102206737 - U2 snRNA snRNA -152 36 1 6 1076 15241 157 33 16 chrX 64443559 64444134 -102206162 - Lx LINE L1 -6 3874 3281 6 1076 227 31 0 30 chrX 64444134 64444167 -102206129 + (TTG)n Simple_repeat Simple_repeat 2 33 0 6 1076 15241 161 43 20 chrX 64444167 64444682 -102205614 - Lx LINE L1 -2603 3283 2764 6 1076 3508 23 0 0 chrX 64444682 64445078 -102205218 - MTA_Mm LTR MaLR 0 396 1 6 1076 15241 161 43 20 chrX 64445078 64446151 -102204145 - Lx LINE L1 -3123 2763 1668 6 1076 787 269 20 78 chrX 64446149 64446455 -102203841 + Lx9 LINE L1 6815 7102 -542 6 1076 34 0 0 0 chrX 64447486 64447520 -102202776 + AT_rich Low_complexity Low_complexity 1 34 0 6 1076 392 218 129 0 chrX 64447787 64447888 -102202408 + ORR1D2 LTR MaLR 1 114 -256 6 1076 1290 298 46 58 chrX 64447947 64448464 -102201832 - Lx5 LINE L1 -34 7016 6506 6 1076 367 304 17 0 chrX 64448500 64448615 -102201681 - Lx5 LINE L1 -688 6362 6246 6 1076 387 263 84 8 chrX 64448615 64448734 -102201562 + Lx6 LINE L1 6095 6222 -1238 6 1076 585 262 91 20 chrX 64448938 64449137 -102201159 - B3 SINE B2 -1 215 3 6 1076 183 330 44 35 chrX 64449892 64450005 -102200291 + L3 LINE CR1 3261 3374 -1115 6 1076 1183 206 184 17 chrX 64450574 64450993 -102199303 - Lx9 LINE L1 -8 7636 7148 6 1076 832 221 100 57 chrX 64451069 64451188 -102199108 - Lx6 LINE L1 -17 7679 7557 6 1076 267 79 0 0 chrX 64451188 64451226 -102199070 + (TATAA)n Simple_repeat Simple_repeat 3 40 0 6 1076 832 221 100 57 chrX 64451226 64451385 -102198911 - Lx6 LINE L1 -140 7556 7390 6 1076 1164 172 74 20 chrX 64451419 64451709 -102198587 - Lx6 LINE L1 -737 6959 6598 6 1076 405 0 0 0 chrX 64453890 64453935 -102196361 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1076 204 360 0 29 chrX 64455322 64455462 -102194834 + GA-rich Low_complexity Low_complexity 2 137 0 6 1076 226 254 0 0 chrX 64455485 64455548 -102194748 + L1_Mur3 LINE L1 543 605 -7107 6 1076 6827 228 58 56 chrX 64455565 64457202 -102193094 + L1_Mur3 LINE L1 433 2074 -3806 6 1076 186 103 0 0 chrX 64457202 64457231 -102193065 + (CAG)n Simple_repeat Simple_repeat 1 29 0 6 1076 6827 186 49 55 chrX 64457231 64457596 -102192700 + L1_Mur3 LINE L1 2075 2458 -3422 6 1076 216 0 0 0 chrX 64457596 64457620 -102192676 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 6 1076 6827 186 49 55 chrX 64457620 64458127 -102192169 + L1_Mur3 LINE L1 2459 2942 -2938 6 1076 946 208 20 52 chrX 64458207 64458470 -102191826 - MYSERV16_I-int LTR ERVK -1586 740 523 6 1076 235 281 31 82 chrX 64458585 64458682 -102191614 + RMER4B LTR ERVK 454 545 -40 6 1076 495 0 0 0 chrX 64458751 64458806 -102191490 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 1076 288 0 0 0 chrX 64458807 64458839 -102191457 + (GA)n Simple_repeat Simple_repeat 2 33 0 6 1076 1135 167 119 4 chrX 64458851 64459103 -102191193 + L1_Mur3 LINE L1 3849 4129 -1751 6 1076 3570 81 10 2 chrX 64459097 64459591 -102190705 - Lx3_Mus LINE L1 -516 5370 4873 6 1076 4037 108 30 1 chrX 64459591 64460139 -102190157 + Lx3_Mus LINE L1 5431 6049 -960 6 1076 180 0 0 0 chrX 64460139 64460159 -102190137 + (GGGA)n Simple_repeat Simple_repeat 1 20 0 6 1076 4037 125 127 6 chrX 64460159 64460455 -102189841 + Lx3_Mus LINE L1 6050 6354 -655 6 1076 3537 102 19 15 chrX 64460455 64460984 -102189312 + Lx3_Mus LINE L1 6443 6973 -8 6 1076 6829 161 50 23 chrX 64461013 64462402 -102187894 + L1_Mur3 LINE L1 4114 5540 -340 6 1076 1021 101 0 33 chrX 64462412 64462565 -102187731 + B1_Mus1 SINE Alu 1 148 0 6 1076 956 104 0 0 chrX 64462565 64462700 -102187596 + L1_Mus3 LINE L1 6317 6451 -187 6 1076 867 133 7 0 chrX 64462702 64462837 -102187459 + L1_Mus4 LINE L1 6180 6315 -321 6 1076 629 118 42 0 chrX 64462848 64462967 -102187329 + L1_Mus4 LINE L1 6511 6634 -2 6 1076 343 342 74 90 chrX 64462983 64463272 -102187024 + B4A SINE B4 11 274 -18 6 1076 1043 223 5 0 chrX 64463359 64463552 -102186744 + Lx6 LINE L1 6914 7107 -353 6 1076 8138 152 34 94 chrX 64463553 64465225 -102185071 + RLTR21 LTR ERVK 1 1572 0 6 1076 1636 222 17 22 chrX 64465226 64465585 -102184711 + Lx6 LINE L1 7104 7460 0 6 1076 468 0 0 0 chrX 64465893 64465945 -102184351 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1076 707 90 0 0 chrX 64465949 64466049 -102184247 - B1_Mus2 SINE Alu -6 141 42 6 1076 4241 96 0 3 chrX 64467523 64468106 -102182190 - L1_Mm LINE L1 -15 5868 5288 6 1076 3341 58 22 55 chrX 64468117 64468608 -102181688 - IAPLTR2_Mm LTR ERVK 0 475 1 6 1076 479 50 0 8 chrX 64468609 64468691 -102181605 - L1Md_F3 LINE L1 -3 6579 6501 6 1076 5440 117 17 6 chrX 64468691 64469532 -102180764 - L1_Mm LINE L1 -595 5288 4439 6 1076 420 318 0 50 chrX 64470278 64470437 -102179859 + MER5A1 DNA MER1_type 2 152 -14 6 1076 815 324 2 95 chrX 64470657 64471098 -102179198 + MTE2b LTR MaLR 3 366 -4 6 1076 615 327 27 27 chrX 64471621 64471882 -102178414 - MLT1A LTR MaLR -113 261 1 6 1076 422 340 34 34 chrX 64472790 64473116 -102177180 - L1M6 LINE L1 -4770 1726 1401 6 1076 320 363 80 8 chrX 64473468 64473593 -102176703 - RSINE1 SINE B4 -31 134 1 6 1076 357 305 0 0 chrX 64473600 64473682 -102176614 - MIRc SINE MIR -116 152 71 6 1076 1386 171 139 10 chrX 64475359 64475660 -102174636 + RMER10A LTR ERVL 3 342 -100 6 1076 1247 289 18 30 chrX 64475909 64476002 -102174294 + MTE2b LTR MaLR 41 127 -252 6 1076 4923 132 43 21 chrX 64476002 64476889 -102173407 - RMER17A2 LTR ERVK 0 906 1 6 1076 1247 289 18 30 chrX 64476889 64477134 -102173162 + MTE2b LTR MaLR 128 375 -4 6 1076 1240 150 0 9 chrX 64477247 64477476 -102172820 - L1_Mur3 LINE L1 -4450 1430 1204 6 1076 386 249 34 51 chrX 64477476 64477506 -102172790 + CYRA11_Mm Unknown Y-chromosome 146 172 -445 6 1076 903 158 33 17 chrX 64477506 64477686 -102172610 - URR1A DNA MER1_type 0 226 44 6 1076 7776 15 2 2 chrX 64477905 64478997 -102171299 - L1Md_Gf LINE L1 -5634 888 1 6 1076 3530 12 2 10 chrX 64478997 64479409 -102170887 + L1Md_T LINE L1 6174 6582 0 6 1076 6405 99 67 4 chrX 64479507 64480452 -102169844 + Lx LINE L1 5648 6651 -3 6 1076 2765 170 112 30 chrX 64480509 64481099 -102169197 - L1_Mur3 LINE L1 -6578 1150 513 6 1076 460 312 55 26 chrX 64481342 64481654 -102168642 + Zaphod DNA Tip100 3576 3896 -135 6 1076 281 256 32 64 chrX 64481822 64481947 -102168349 - L1MA4 LINE L1 -376 5924 5804 6 1076 346 337 0 0 chrX 64481950 64482042 -102168254 - B3A SINE B2 -106 92 1 6 1076 396 238 78 16 chrX 64482043 64482232 -102168064 - L1MA4 LINE L1 -373 5811 5627 6 1076 870 176 44 83 chrX 64482233 64482462 -102167834 - ORR1C2 LTR MaLR 0 378 159 6 1076 761 151 0 11 chrX 64482464 64482645 -102167651 + GA-rich Low_complexity Low_complexity 2 180 0 6 1076 1023 166 22 0 chrX 64482659 64482840 -102167456 - ORR1C2 LTR MaLR -199 185 1 6 1076 344 228 16 15 chrX 64482841 64482944 -102167352 - L1MA4 LINE L1 -693 5607 5464 6 1076 257 280 20 51 chrX 64483018 64483116 -102167180 - MIR SINE MIR -74 188 94 6 1076 231 262 38 0 chrX 64483155 64483235 -102167061 + GA-rich Low_complexity Low_complexity 2 84 0 6 1076 5593 171 33 4 chrX 64484356 64485355 -102164941 - Lx LINE L1 0 6654 5627 7 1076 1063 206 27 27 chrX 64485408 64485632 -102164664 + L1VL4 LINE L1 424 647 -5655 7 1076 4799 174 9 3 chrX 64485630 64486511 -102163785 - Lx LINE L1 -253 5630 4745 7 134 5112 157 6 19 chrX 64486506 64487448 -102162848 + L1_Mur2 LINE L1 3796 4725 -1152 7 1077 330 252 58 0 chrX 64488020 64488123 -102162173 + MER5A1 DNA MER1_type 57 165 -1 7 1077 1419 53 11 0 chrX 64489755 64489942 -102160354 + L1Md_T LINE L1 6393 6581 -1 7 1077 195 372 43 28 chrX 64490684 64490825 -102159471 - L2 LINE L2 -930 2489 2347 7 1077 347 268 191 9 chrX 64490845 64491060 -102159236 + MER44A DNA MER2_type 1 254 -85 7 1077 1101 240 110 116 chrX 64491259 64491640 -102158656 - MTE2b LTR MaLR 0 379 1 7 1077 5625 224 73 72 chrX 64491893 64493739 -102156557 + RLTR22_Mur LTR ERVK 1 1848 0 7 1077 4286 68 27 15 chrX 64494253 64494847 -102155449 - L1Md_F2 LINE L1 0 6582 5982 7 1077 3637 42 0 3 chrX 64494847 64495366 -102154930 + L1Md_F2 LINE L1 5427 5944 -638 7 1077 890 129 57 0 chrX 64496233 64496373 -102153923 + B1_Mus1 SINE Alu 1 148 0 7 1077 189 0 0 0 chrX 64496373 64496394 -102153902 + (CAAAAA)n Simple_repeat Simple_repeat 6 26 0 7 1077 3074 160 107 8 chrX 64496439 64497056 -102153240 - RMER6C LTR ERVK -12 678 1 7 1077 183 261 164 9 chrX 64497066 64497182 -102153114 + L3 LINE CR1 4203 4336 -153 7 1077 5920 90 36 49 chrX 64497236 64498961 -102151335 + L1Md_F LINE L1 441 2144 -3739 7 1077 603 269 54 0 chrX 64498961 64499110 -102151186 + ETnERV2-int LTR ERVK 7067 7223 -183 7 1077 201 155 52 0 chrX 64499394 64499452 -102150844 + CT-rich Low_complexity Low_complexity 2 62 0 7 1077 3607 73 10 0 chrX 64499506 64500000 -102150296 + L1_Mm LINE L1 2141 2639 -3244 7 1077 21432 80 2 7 chrX 64500000 64502962 -102147334 + L1Md_F2 LINE L1 2640 5586 -297 1 1077 6825 67 30 83 chrX 64502962 64504013 -102146283 + L1Md_F2 LINE L1 5587 6582 0 1 1077 23 0 0 0 chrX 64504157 64504180 -102146116 + AT_rich Low_complexity Low_complexity 1 23 0 2 1077 723 315 201 20 chrX 64504386 64504779 -102145517 - ORR1E-int LTR MaLR -993 587 124 3 1077 437 234 54 0 chrX 64504787 64504898 -102145398 + RMER19C LTR ERVK 1 117 -494 4 1077 216 42 60 40 chrX 64504904 64504954 -102145342 + (TTTTTG)n Simple_repeat Simple_repeat 2 52 0 5 1077 1145 286 55 83 chrX 64504961 64505468 -102144828 + RMER19C LTR ERVK 111 603 -8 4 1077 320 294 29 19 chrX 64505470 64505574 -102144722 - ORR1E-int LTR MaLR -1471 109 5 3 1077 819 321 87 21 chrX 64505580 64505914 -102144382 - ORR1E LTR MaLR 0 359 4 3 1077 24 32 0 0 chrX 64505988 64506019 -102144277 + AT_rich Low_complexity Low_complexity 1 31 0 6 1077 557 102 0 2 chrX 64506153 64506253 -102144043 - L1Md_F LINE L1 -4197 1689 1591 7 1077 1236 56 6 0 chrX 64506253 64506415 -102143881 - MTA_Mm LTR MaLR 0 396 234 8 1077 1053 31 0 0 chrX 64506413 64506543 -102143753 - MTA_Mm LTR MaLR -266 130 1 8 1077 7557 68 43 16 chrX 64506543 64507612 -102142684 - MTA_Mm-int LTR MaLR 0 1098 1 8 1077 3244 51 5 0 chrX 64507612 64508006 -102142290 - MTA_Mm LTR MaLR 0 396 1 8 1077 2979 152 23 11 chrX 64508010 64509034 -102141262 - L1Md_F LINE L1 -2324 1590 536 7 1077 349 250 17 17 chrX 64509030 64509152 -102141144 - L1VL1 LINE L1 -6147 275 151 9 1077 288 269 63 63 chrX 64509762 64509873 -102140423 + MLT1K LTR MaLR 480 590 -5 1 1077 21 36 0 0 chrX 64510050 64510078 -102140218 + AT_rich Low_complexity Low_complexity 1 28 0 1 1077 411 237 0 21 chrX 64510988 64511083 -102139213 + Lx4B LINE L1 816 908 -6178 1 1077 1947 161 33 96 chrX 64511089 64511717 -102138579 - RMER17D2 LTR ERVK -2 887 258 1 1077 16612 50 8 2 chrX 64511728 64514537 -102135759 - L1Md_F2 LINE L1 -13 6569 3741 1 1077 1634 89 63 0 chrX 64514539 64514776 -102135520 - RMER17D2 LTR ERVK -499 252 1 1 1077 22216 146 15 2 chrX 64514785 64515148 -102135148 + Lx4B LINE L1 922 1352 -4525 1 1077 1095 96 0 0 chrX 64515148 64515294 -102135002 + B1_Mus1 SINE Alu 3 148 0 1 1077 22216 161 38 49 chrX 64515294 64515383 -102134913 + Lx4B LINE L1 1353 1353 -4524 1 1077 183 42 0 0 chrX 64515383 64515407 -102134889 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 1077 22216 161 38 49 chrX 64515407 64515676 -102134620 + Lx4B LINE L1 1353 1600 -4277 1 1077 5022 60 11 0 chrX 64515676 64516321 -102133975 + L1Md_F2 LINE L1 5929 6580 -2 1 1077 22216 161 38 49 chrX 64516321 64517160 -102133136 + Lx4B LINE L1 1601 2443 -3434 1 1077 1990 155 24 16 chrX 64517160 64517534 -102132762 + Lx2B LINE L1 6619 6995 -5 1 1077 22216 161 38 49 chrX 64517534 64518129 -102132167 + Lx4B LINE L1 2444 3045 -2832 1 1077 239 54 27 0 chrX 64518129 64518166 -102132130 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 1 1077 22216 159 35 53 chrX 64518166 64521428 -102128868 + Lx4B LINE L1 3046 6364 -694 1 1077 1513 166 82 121 chrX 64521442 64521460 -102128836 + MYSERV6-int LTR ERVK 8569 8586 -373 2 1077 180 0 0 0 chrX 64521460 64521480 -102128816 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 1077 1513 166 82 121 chrX 64521480 64521865 -102128431 + MYSERV6-int LTR ERVK 8587 8956 -3 2 1077 2139 172 0 5 chrX 64521888 64522286 -102128010 - L1_Mur2 LINE L1 -1362 4515 4120 2 1077 4987 138 12 4 chrX 64522291 64523297 -102126999 + Lx LINE L1 4998 6009 -645 2 1077 5831 104 26 0 chrX 64523299 64524147 -102126149 + L1_Mus3 LINE L1 5767 6636 -2 2 1077 3763 129 37 14 chrX 64524146 64524788 -102125508 + Lx LINE L1 5998 6654 0 2 1077 974 232 134 27 chrX 64524892 64525184 -102125112 + RMER4B LTR ERVK 62 384 -201 2 1077 210 150 0 0 chrX 64525189 64525229 -102125067 + (TTAA)n Simple_repeat Simple_repeat 1 40 0 2 1077 23 0 0 0 chrX 64525321 64525344 -102124952 + AT_rich Low_complexity Low_complexity 1 23 0 2 1077 200 125 25 0 chrX 64526176 64526216 -102124080 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 2 1077 769 304 151 85 chrX 64526304 64526606 -102123690 + MER90a LTR ERV1 1 304 -310 2 1077 306 115 0 0 chrX 64526606 64526667 -102123629 - Lx LINE L1 0 6654 6594 3 1077 769 304 151 85 chrX 64526667 64526940 -102123356 + MER90a LTR ERV1 305 614 0 2 1077 192 77 0 0 chrX 64527269 64527295 -102123001 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1077 1009 106 0 7 chrX 64528590 64528732 -102121564 - B1_Mus1 SINE Alu -7 141 1 3 1077 2858 181 169 10 chrX 64528999 64529596 -102120700 + RLTR17 LTR ERVK 1 692 0 3 1077 23 68 0 0 chrX 64529632 64529676 -102120620 + AT_rich Low_complexity Low_complexity 1 44 0 3 1077 246 62 0 0 chrX 64529727 64529759 -102120537 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 3 1077 387 285 107 40 chrX 64529761 64529911 -102120385 - RSINE1 SINE B4 -4 161 2 3 1077 1171 234 74 14 chrX 64530387 64530738 -102119558 + L1_Mur3 LINE L1 2007 2378 -3502 3 1077 186 43 0 0 chrX 64530831 64530854 -102119442 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1077 279 171 24 73 chrX 64531335 64531417 -102118879 + Lx7 LINE L1 7602 7679 -17 3 1077 7435 81 0 1 chrX 64531650 64532627 -102117669 + L1Md_F2 LINE L1 5601 6576 -6 4 1077 240 35 0 0 chrX 64532684 64532713 -102117583 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 1077 338 269 104 57 chrX 64532713 64532906 -102117390 + L1MA8 LINE L1 5820 6021 -270 4 1077 22 35 0 0 chrX 64532949 64532978 -102117318 + AT_rich Low_complexity Low_complexity 1 29 0 4 1077 2621 42 9 3 chrX 64532987 64533320 -102116976 + L1Md_F3 LINE L1 6248 6582 -2 4 1077 2786 97 19 5 chrX 64533523 64533936 -102116360 - BGLII LTR ERVK 0 421 3 4 1077 358 346 180 4 chrX 64534349 64534604 -102115692 - L2 LINE L2 -604 2815 2516 4 1077 364 223 124 9 chrX 64534714 64534827 -102115469 - MER53 DNA hAT -67 126 1 4 1077 369 0 0 0 chrX 64537724 64537765 -102112531 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1077 233 308 24 48 chrX 64539506 64539632 -102110664 + MTEb LTR MaLR 252 374 -5 4 1077 536 193 9 0 chrX 64539764 64539873 -102110423 + L1_Mur2 LINE L1 4477 4586 -1291 5 1077 1066 213 0 24 chrX 64539973 64540223 -102110073 - L1_Mur3 LINE L1 -937 4943 4700 5 1077 660 165 31 8 chrX 64540267 64540395 -102109901 - RLTR15 LTR ERVK -228 131 1 5 1077 315 213 16 0 chrX 64540402 64540463 -102109833 - Lx9 LINE L1 -1114 6530 6469 5 1077 3080 231 62 33 chrX 64540457 64541436 -102108860 - L1_Rod LINE L1 -594 5253 4246 5 1077 268 216 114 26 chrX 64541432 64541546 -102108750 - L1M3 LINE L1 -1034 5106 4983 5 1077 492 62 0 0 chrX 64542355 64542419 -102107877 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 1077 912 288 153 0 chrX 64542714 64542995 -102107301 - Lx8 LINE L1 -149 7324 7001 5 1077 3587 144 53 21 chrX 64543019 64543699 -102106597 - RMER6A LTR ERVK -54 702 1 5 1077 346 281 21 0 chrX 64543702 64543798 -102106498 - Lx8 LINE L1 -475 6998 6901 5 1077 249 234 0 0 chrX 64545141 64545205 -102105091 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 1077 1189 155 129 0 chrX 64545441 64545705 -102104591 - Lx9 LINE L1 -46 7598 7301 6 1077 244 182 18 18 chrX 64545735 64545791 -102104505 + (CAAA)n Simple_repeat Simple_repeat 4 59 0 6 1077 1275 285 46 35 chrX 64545791 64546246 -102104050 - RMER5 LTR ERV1 -5 529 70 6 1077 440 337 56 19 chrX 64546320 64546553 -102103743 + MLT1B LTR MaLR 13 252 -215 6 1077 1267 195 89 132 chrX 64547017 64547525 -102102771 - Lx9 LINE L1 -2 7642 7157 6 1077 1020 297 44 52 chrX 64547551 64547938 -102102358 - LTR55 LTR ERV -164 384 1 6 1077 357 297 68 30 chrX 64548043 64548279 -102102017 - L1M4 LINE L1 -2229 3917 3673 6 1077 4381 52 4 4 chrX 64548298 64548841 -102101455 - L1Md_F2 LINE L1 -83 6499 5957 6 1077 7848 34 0 0 chrX 64548841 64549772 -102100524 + L1Md_T LINE L1 5652 6582 0 6 1077 1365 35 17 0 chrX 64549772 64549946 -102100350 + L1Md_F2 LINE L1 5780 5956 -626 6 1077 306 310 48 22 chrX 64549942 64550173 -102100123 - L1M4 LINE L1 -2460 3686 3450 6 1077 608 314 50 32 chrX 64550273 64550556 -102099740 - B4A SINE B4 0 292 5 7 1077 505 215 176 10 chrX 64550594 64550787 -102099509 - Lx9 LINE L1 -1 7643 7419 7 1077 282 116 0 0 chrX 64550788 64550831 -102099465 + (TATATG)n Simple_repeat Simple_repeat 4 46 0 7 1077 318 251 223 10 chrX 64550874 64551184 -102099112 - L1M4 LINE L1 -2722 3424 3049 6 1077 321 26 0 0 chrX 64551208 64551246 -102099050 + (TA)n Simple_repeat Simple_repeat 2 39 0 7 1077 553 373 29 0 chrX 64551391 64551600 -102098696 - Lx8 LINE L1 -175 7298 7084 7 1077 2769 66 0 3 chrX 64551608 64551972 -102098324 - L1_Mur1 LINE L1 -1762 4124 3762 7 1077 291 282 34 34 chrX 64552037 64552125 -102098171 - Lx8 LINE L1 -597 6876 6789 7 1077 33 25 0 0 chrX 64552177 64552217 -102098079 + AT_rich Low_complexity Low_complexity 1 40 0 7 1077 914 223 148 4 chrX 64552256 64552486 -102097810 + Lx8 LINE L1 6229 6491 -982 7 1077 352 239 11 0 chrX 64552494 64552586 -102097710 - L1_Mur3 LINE L1 -2445 3435 3343 7 1077 362 188 68 86 chrX 64552602 64552769 -102097527 - L1_Mur3 LINE L1 -2585 3262 3103 7 1077 201 121 0 0 chrX 64553127 64553160 -102097136 + (TA)n Simple_repeat Simple_repeat 2 34 0 7 1077 479 17 17 0 chrX 64553534 64553594 -102096702 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 8 1077 2897 156 20 8 chrX 64553594 64554105 -102096191 - Lx3_Mus LINE L1 -19 6990 6474 8 1077 378 111 0 0 chrX 64554112 64554166 -102096130 + Lx3_Mus LINE L1 5204 5257 -629 8 1077 10685 100 21 24 chrX 64554152 64556381 -102093915 + Lx3_Mus LINE L1 4247 6457 -552 8 1077 25 0 0 0 chrX 64556810 64556835 -102093461 + AT_rich Low_complexity Low_complexity 1 25 0 8 1077 474 18 0 0 chrX 64556842 64556897 -102093399 + (TG)n Simple_repeat Simple_repeat 2 56 0 8 1077 551 357 0 6 chrX 64556906 64557075 -102093221 - B3A SINE B2 -30 168 1 8 1077 26 50 0 0 chrX 64557699 64557739 -102092557 + AT_rich Low_complexity Low_complexity 1 40 0 8 1077 719 123 26 0 chrX 64558845 64558999 -102091297 + (TA)n Simple_repeat Simple_repeat 2 159 0 8 1077 5999 180 1 206 chrX 64559019 64560178 -102090118 + L1_Mus2 LINE L1 4334 5101 -785 8 1077 225 0 0 0 chrX 64560178 64560203 -102090093 + (TAA)n Simple_repeat Simple_repeat 1 25 0 8 1077 5999 113 1 106 chrX 64560203 64561180 -102089116 + L1_Mus2 LINE L1 5102 6066 -500 8 1077 981 34 0 0 chrX 64561170 64561288 -102089008 - L1Md_A LINE L1 -6500 224 107 9 1077 1431 18 17 17 chrX 64561270 64561443 -102088853 + L1Md_A LINE L1 5414 5586 -297 9 1077 8771 14 0 5 chrX 64561443 64562443 -102087853 + L1Md_A LINE L1 5587 6581 -1 9 1077 3655 102 2 2 chrX 64562454 64562973 -102087323 + L1_Mus2 LINE L1 6047 6565 -1 8 1077 238 241 0 36 chrX 64563265 64563321 -102086975 - RSINE1 SINE B4 -30 135 82 9 1077 1508 45 15 0 chrX 64563433 64563631 -102086665 - L1Md_F3 LINE L1 -14 6570 6370 9 1077 468 318 34 50 chrX 64563632 64563811 -102086485 - Lx8 LINE L1 -1092 6381 6206 9 1077 405 0 0 0 chrX 64563821 64563866 -102086430 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1077 28 86 0 0 chrX 64563977 64564047 -102086249 + AT_rich Low_complexity Low_complexity 1 70 0 9 1077 24 32 0 0 chrX 64564089 64564120 -102086176 + AT_rich Low_complexity Low_complexity 1 31 0 9 1077 249 33 0 0 chrX 64564394 64564424 -102085872 + (TTA)n Simple_repeat Simple_repeat 1 30 0 9 1077 4585 130 59 15 chrX 64564428 64565227 -102085069 - Lx3B LINE L1 -3 6970 6137 9 1077 772 347 24 58 chrX 64565926 64566217 -102084079 + LTR16B1 LTR ERVL 1 281 -199 1 1077 225 0 0 0 chrX 64566242 64566267 -102084029 + (TTG)n Simple_repeat Simple_repeat 1 25 0 1 1077 1398 205 4 0 chrX 64566320 64566579 -102083717 - Lx5 LINE L1 -190 5687 5428 1 1077 1978 189 52 5 chrX 64566575 64566980 -102083316 + Lx5 LINE L1 5718 6141 -909 1 1077 1489 221 83 0 chrX 64566968 64567307 -102082989 + Lx5 LINE L1 6681 7047 -3 1 1077 308 283 0 94 chrX 64567460 64567577 -102082719 + Lx7 LINE L1 7250 7355 -341 1 1077 2909 94 5 14 chrX 64567577 64567999 -102082297 - L1_Mus1 LINE L1 -1 6566 6149 1 1077 32 67 0 0 chrX 64568383 64568443 -102081853 + AT_rich Low_complexity Low_complexity 1 60 0 1 1077 477 259 70 30 chrX 64568586 64568821 -102081475 - L1MA4 LINE L1 -335 5962 5726 1 1077 658 202 251 18 chrX 64568821 64568992 -102081304 - B3 SINE B2 -5 211 1 1 1077 260 266 60 128 chrX 64568992 64569043 -102081253 - L1MA4 LINE L1 -446 5725 5688 1 1077 929 214 162 54 chrX 64569044 64569414 -102080882 + Lx3_Mus LINE L1 3 412 -6572 1 1077 886 182 50 17 chrX 64569417 64569596 -102080700 + Lx3_Mus LINE L1 676 860 -6124 1 1077 683 108 0 84 chrX 64569610 64569684 -102080612 + Lx3_Mus LINE L1 1322 1391 -4495 1 1077 3035 178 98 65 chrX 64569684 64570558 -102079738 - RMER17A2 LTR ERVK -3 903 1 1 1077 683 108 0 84 chrX 64570558 64570614 -102079682 + Lx3_Mus LINE L1 1392 1441 -4445 1 1077 9358 102 13 24 chrX 64570611 64572056 -102078240 - L1_Mus1 LINE L1 -390 5493 4065 1 1077 7057 89 0 2 chrX 64572054 64573117 -102077179 + L1_Mus1 LINE L1 5507 6566 -1 1 1077 332 52 0 17 chrX 64573215 64573274 -102077022 + B2_Mm2 SINE B2 137 194 -1 1 1077 11900 107 25 11 chrX 64573276 64575199 -102075097 + Lx3_Mus LINE L1 1426 3375 -2511 1 1077 843 55 0 0 chrX 64575199 64575308 -102074988 + (TTCTC)n Simple_repeat Simple_repeat 2 110 0 1 1077 594 103 0 0 chrX 64575310 64575397 -102074899 + (TTCC)n Simple_repeat Simple_repeat 3 89 0 1 1077 11016 96 0 1 chrX 64575420 64577721 -102072575 - L1_Mus1 LINE L1 0 6567 4270 1 1077 17059 104 18 9 chrX 64577719 64581326 -102068970 + Lx3_Mus LINE L1 3368 7009 0 1 1077 827 121 70 35 chrX 64581370 64581542 -102068754 - L1_Mus3 LINE L1 -2 6636 6459 1 1077 258 56 0 0 chrX 64581638 64581674 -102068622 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 1 1077 463 308 81 16 chrX 64581684 64582004 -102068292 - L1M2 LINE L1 -605 5695 5355 1 1077 24 32 0 0 chrX 64582147 64582178 -102068118 + AT_rich Low_complexity Low_complexity 1 31 0 1 1077 484 234 27 0 chrX 64583191 64583302 -102066994 + B3A SINE B2 1 114 -84 1 1077 284 0 28 0 chrX 64583423 64583459 -102066837 + (TTTTG)n Simple_repeat Simple_repeat 1 37 0 1 1077 844 84 118 0 chrX 64583459 64583578 -102066718 - B1_Mus2 SINE Alu -13 134 2 1 1077 339 85 0 0 chrX 64584012 64584059 -102066237 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 1077 276 30 0 0 chrX 64584059 64584091 -102066205 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1077 4691 61 7 3 chrX 64584478 64585069 -102065227 - L1_Mus2 LINE L1 0 6566 5974 1 1077 969 314 125 27 chrX 64585513 64586324 -102063972 - Lx8 LINE L1 -7 7637 6637 1 1077 855 280 72 64 chrX 64586396 64586785 -102063511 + RMER13A LTR ERVK 98 489 -371 1 1077 3319 224 69 49 chrX 64586785 64587722 -102062574 - Lx7 LINE L1 -117 7579 6624 1 1077 756 245 236 11 chrX 64587718 64588072 -102062224 - Lx7 LINE L1 -1420 6276 5843 1 1077 1040 200 15 5 chrX 64588085 64588281 -102062015 - Lx7 LINE L1 -209 5671 5474 1 1077 356 250 8 67 chrX 64588394 64588514 -102061782 + L1MD1 LINE L1 6119 6231 -11 1 1077 29 28 0 0 chrX 64589291 64589327 -102060969 + AT_rich Low_complexity Low_complexity 1 36 0 1 1077 289 274 20 31 chrX 64589717 64589815 -102060481 - MIR3 SINE MIR -11 197 101 1 1077 211 286 40 111 chrX 64590360 64590486 -102059810 + PB1D7 SINE Alu 3 119 -1 1 1077 1213 270 24 35 chrX 64590881 64591156 -102059140 + RMER1A Other Other 297 626 -404 1 1077 2273 116 22 3 chrX 64591156 64591518 -102058778 + Lx2 LINE L1 6628 6996 -1 1 1077 1213 261 12 42 chrX 64591518 64591641 -102058655 + RMER1A Other Other 627 748 -282 1 1077 238 286 80 20 chrX 64591712 64591812 -102058484 - MLT1B LTR MaLR 0 390 285 1 1077 286 270 35 0 chrX 64592184 64592299 -102057997 - L1MA9 LINE L1 -20 6292 6174 1 1077 637 84 0 0 chrX 64592307 64592402 -102057894 - Lx LINE L1 -259 6395 6301 1 1077 1019 102 0 0 chrX 64592406 64592543 -102057753 + L1_Mm LINE L1 5457 5593 -290 1 1077 1325 117 0 0 chrX 64592543 64592723 -102057573 + Lx LINE L1 6089 6268 -386 1 1077 259 121 125 125 chrX 64592766 64592870 -102057426 - L1M3 LINE L1 -985 5155 5052 1 1077 2372 254 48 2 chrX 64592860 64593460 -102056836 - Lx9 LINE L1 -646 6998 6371 1 1077 616 327 117 100 chrX 64595166 64595516 -102054780 - MTEb LTR MaLR -2 377 22 1 1077 22 70 0 0 chrX 64595599 64595642 -102054654 + AT_rich Low_complexity Low_complexity 1 43 0 1 1077 24 32 0 0 chrX 64595657 64595688 -102054608 + AT_rich Low_complexity Low_complexity 1 31 0 1 1077 37652 20 3 8 chrX 64595817 64601409 -102048887 + L1Md_A LINE L1 27 5586 -297 1 1077 8342 22 16 0 chrX 64601409 64602388 -102047908 + L1Md_A LINE L1 5587 6581 -1 1 1077 37652 15 0 1 chrX 64602388 64602402 -102047894 + L1Md_A LINE L1 5587 5600 -283 1 1077 507 310 65 34 chrX 64602445 64602799 -102047497 + L1M4 LINE L1 4848 5212 -934 1 1077 2713 84 3 0 chrX 64603189 64603559 -102046737 - L1_Mus1 LINE L1 0 6567 6197 1 1077 714 223 82 6 chrX 64603568 64603726 -102046570 + Lx9 LINE L1 6486 6655 -989 1 1077 2070 171 31 24 chrX 64603730 64604113 -102046183 - ORR1B1 LTR MaLR -8 386 1 1 1077 3148 238 31 3 chrX 64604117 64604850 -102045446 + Lx9 LINE L1 6656 7409 -235 1 1077 239 154 0 0 chrX 64604883 64604922 -102045374 + ORR1B1 LTR MaLR 356 394 0 1 1077 877 178 13 0 chrX 64604923 64605080 -102045216 + ORR1B1-int LTR MaLR 2 160 -1803 1 1077 1599 187 58 6 chrX 64605075 64605387 -102044909 - ORR1B1 LTR MaLR -20 374 47 1 1077 865 234 164 109 chrX 64605411 64605880 -102044416 - Lx7 LINE L1 -106 7590 7096 1 1077 1607 210 67 6 chrX 64605867 64606197 -102044099 - Lx7 LINE L1 -817 6879 6530 1 1077 2892 98 25 16 chrX 64606708 64607143 -102043153 - Lx3_Mus LINE L1 -8 7001 6563 1 1077 5103 88 17 11 chrX 64607168 64607892 -102042404 + Lx3_Mus LINE L1 5828 6555 -454 1 1077 875 185 118 15 chrX 64608395 64608598 -102041698 + URR1A DNA MER1_type 2 225 -1 1 1077 1091 71 0 0 chrX 64608964 64609104 -102041192 + B1_Mus1 SINE Alu 1 140 -8 1 1077 221 0 35 0 chrX 64609104 64609133 -102041163 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 1077 228 185 0 0 chrX 64609172 64609226 -102041070 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 1077 813 178 236 0 chrX 64609483 64609657 -102040639 + B3 SINE B2 1 215 -1 1 1077 2835 54 0 0 chrX 64609788 64610138 -102040158 + L1Md_F2 LINE L1 5237 5586 -297 1 1077 7905 43 15 2 chrX 64610138 64611120 -102039176 + L1Md_F2 LINE L1 5587 6581 -1 1 1077 23 0 0 0 chrX 64611167 64611190 -102039106 + AT_rich Low_complexity Low_complexity 1 23 0 1 1077 622 315 0 0 chrX 64611411 64611554 -102038742 + RSINE1 SINE B4 2 144 -21 1 1077 380 239 179 34 chrX 64611739 64611856 -102038440 + ID_B1 SINE B4 85 218 -6 1 1077 1316 102 16 0 chrX 64612086 64612272 -102038024 + B2_Mm2 SINE B2 2 190 -5 1 1077 25 75 0 0 chrX 64612598 64612651 -102037645 + AT_rich Low_complexity Low_complexity 1 53 0 1 1077 367 263 71 13 chrX 64612651 64612805 -102037491 + Lx8 LINE L1 5092 5288 -855 1 1077 636 94 0 0 chrX 64612854 64612960 -102037336 + (TC)n Simple_repeat Simple_repeat 2 107 0 1 1077 1032 99 0 14 chrX 64612980 64613124 -102037172 - B1_Mus1 SINE Alu -6 142 1 1 1077 31 0 0 0 chrX 64613203 64613234 -102037062 + AT_rich Low_complexity Low_complexity 1 31 0 1 1077 341 293 127 32 chrX 64613347 64613664 -102036632 + Lx8 LINE L1 5583 5931 -366 1 1077 24 32 0 0 chrX 64613675 64613706 -102036590 + AT_rich Low_complexity Low_complexity 1 31 0 1 1077 260 351 102 33 chrX 64613978 64614193 -102036103 + MLT-int LTR MaLR 449 678 -1057 1 1077 350 127 0 53 chrX 64614247 64614322 -102035974 - Lx LINE L1 -4 6650 6580 1 1077 229 282 24 0 chrX 64614322 64614407 -102035889 + Lx7 LINE L1 7227 7313 -383 1 1077 510 83 0 0 chrX 64614418 64614490 -102035806 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 1077 767 241 139 58 chrX 64614661 64614991 -102035305 - MTC-int LTR MaLR -7 1251 895 1 1077 3066 40 3 0 chrX 64614992 64615362 -102034934 + L1Md_F2 LINE L1 5216 5586 -297 1 1077 7759 53 12 5 chrX 64615362 64616337 -102033959 + L1Md_F2 LINE L1 5587 6568 -14 1 1077 628 326 137 60 chrX 64616345 64616746 -102033550 - MTE-int LTR MaLR -377 1203 772 1 1077 4036 107 3 13 chrX 64616751 64617377 -102032919 + L1Md_F2 LINE L1 5960 6579 -3 1 1077 892 316 67 56 chrX 64617413 64617772 -102032524 - MTD LTR MaLR -56 363 1 1 1077 27 49 0 0 chrX 64617987 64618028 -102032268 + AT_rich Low_complexity Low_complexity 1 41 0 1 1078 24 53 0 0 chrX 64620186 64620224 -102030072 + AT_rich Low_complexity Low_complexity 1 38 0 1 1078 233 114 0 0 chrX 64620574 64620609 -102029687 - B1_Mus2 SINE Alu -19 128 94 1 1078 383 305 77 28 chrX 64621823 64622005 -102028291 - L1MA5 LINE L1 -180 6120 5930 1 1078 229 272 62 12 chrX 64622009 64622154 -102028142 + L1MA5 LINE L1 6125 6281 -19 1 1078 1902 329 72 67 chrX 64623264 64624168 -102026128 - Lx8 LINE L1 -352 7121 6195 1 1078 1869 69 0 4 chrX 64624168 64624415 -102025881 + L1_Mus1 LINE L1 6319 6564 -3 1 1078 1902 329 72 67 chrX 64624415 64624867 -102025429 - Lx8 LINE L1 -1279 6194 5760 1 1078 347 364 6 18 chrX 64624917 64625085 -102025211 - Lx9 LINE L1 -303 7341 7176 1 1078 2433 290 27 53 chrX 64625085 64625697 -102024599 - Lx9 LINE L1 -436 7208 6620 1 1078 2112 185 148 63 chrX 64625697 64626331 -102023965 + RMER6C LTR ERVK 1 688 -2 1 1078 2433 290 27 53 chrX 64626331 64626531 -102023765 - Lx9 LINE L1 -1025 6619 6417 1 1078 38861 65 4 23 chrX 64626625 64633712 -102016584 - L1Md_T LINE L1 0 6582 99 1 1078 1136 260 104 40 chrX 64633747 64634456 -102015840 - L1_Rod LINE L1 -4187 1660 901 1 1078 337 224 50 54 chrX 64634983 64635105 -102015191 - L1M2 LINE L1 -809 5369 5248 1 1078 225 0 0 0 chrX 64635187 64635212 -102015084 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 1 1078 882 290 93 38 chrX 64635215 64635742 -102014554 - L1_Mur3 LINE L1 -1248 4632 4077 1 1078 3990 203 59 38 chrX 64635761 64636827 -102013469 + RLTR25B LTR ERVK 11 1103 0 1 1078 334 250 35 18 chrX 64636827 64636941 -102013355 - L1M2 LINE L1 -2033 4110 3995 1 1078 333 264 40 34 chrX 64636985 64637136 -102013160 - L1M2 LINE L1 -3358 2782 2622 1 1078 357 238 14 56 chrX 64637137 64637247 -102013049 - ORR1D1 LTR MaLR 0 378 259 1 1078 1976 150 9 9 chrX 64637448 64637784 -102012512 - ORR1A1 LTR MaLR -8 338 3 1 1078 432 0 0 0 chrX 64639626 64639674 -102010622 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 1078 987 303 118 19 chrX 64640035 64640813 -102009483 - L1M3 LINE L1 -773 5367 4513 1 1078 510 214 127 0 chrX 64640870 64640996 -102009300 + URR1B DNA MER1_type 83 224 -1 1 1078 17669 114 8 10 chrX 64642518 64645398 -102004898 - L1_Mus2 LINE L1 0 6566 3683 2 1078 1072 97 7 0 chrX 64645398 64645543 -102004753 + B1_Mus2 SINE Alu 2 147 0 2 1078 17669 131 10 14 chrX 64645543 64646060 -102004236 - L1_Mus2 LINE L1 -2201 3682 3183 2 1078 238 26 25 25 chrX 64646060 64646100 -102004196 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 2 1078 17669 131 10 14 chrX 64646100 64646299 -102003997 - L1_Mus2 LINE L1 -2701 3182 2978 2 1078 2007 197 84 41 chrX 64646290 64646851 -102003445 - L1_Mus2 LINE L1 -5623 993 409 2 1078 1033 100 0 0 chrX 64648375 64648515 -102001781 + B1_Mus1 SINE Alu 1 140 -8 2 1078 23 33 0 0 chrX 64648824 64648854 -102001442 + AT_rich Low_complexity Low_complexity 1 30 0 2 1078 22 0 0 0 chrX 64649128 64649150 -102001146 + AT_rich Low_complexity Low_complexity 1 22 0 2 1078 419 276 40 8 chrX 64649361 64649485 -102000811 + MLT1A1 LTR MaLR 279 406 -2 2 1078 270 136 0 0 chrX 64649535 64649579 -102000717 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 1078 226 305 107 51 chrX 64650259 64650274 -102000022 - YREP_Mm Unknown Unknown -1500 312 272 2 1078 395 341 24 0 chrX 64650274 64650400 -101999896 + B1F2 SINE Alu 21 149 0 2 1078 226 305 107 51 chrX 64650400 64650456 -101999840 - YREP_Mm Unknown Unknown -1500 271 105 2 1078 661 243 49 77 chrX 64651332 64651499 -101998797 + B3A SINE B2 18 183 -15 2 1078 342 0 0 0 chrX 64651499 64651537 -101998759 + (TC)n Simple_repeat Simple_repeat 1 38 0 2 1078 393 86 0 0 chrX 64651537 64651594 -101998702 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1078 661 243 49 77 chrX 64651594 64651608 -101998688 + B3A SINE B2 184 194 -4 2 1078 198 0 0 0 chrX 64651920 64651942 -101998354 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 1078 207 0 0 0 chrX 64651942 64651964 -101998332 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1078 513 304 46 20 chrX 64652021 64652216 -101998080 - L1MA4 LINE L1 -300 6000 5801 2 1078 315 299 0 53 chrX 64652608 64652722 -101997574 + ID2 SINE ID 5 112 -40 2 1078 234 128 0 0 chrX 64652940 64652979 -101997317 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 2 1078 37200 52 5 0 chrX 64653025 64658671 -101991625 - L1Md_F3 LINE L1 -14 6573 794 2 1078 244 132 0 0 chrX 64658671 64658709 -101991587 - L1Md_F3 LINE L1 -5987 632 595 2 1078 522 275 0 0 chrX 64658712 64658832 -101991464 - L1Md_F LINE L1 -6394 125 6 2 1078 682 223 83 25 chrX 64658828 64659068 -101991228 - L1Md_F3 LINE L1 -6185 456 226 2 1078 1357 137 107 0 chrX 64659558 64659791 -101990505 - ORR1B1 LTR MaLR -136 258 1 2 1078 5966 202 83 3 chrX 64659791 64661188 -101989108 - ORR1B1-int LTR MaLR 0 1509 1 2 1078 1159 236 138 40 chrX 64661188 64661536 -101988760 - ORR1B1 LTR MaLR 0 384 3 2 1078 295 260 78 20 chrX 64661536 64661689 -101988607 - L1MA4 LINE L1 -857 5286 5125 2 1078 610 299 71 33 chrX 64661910 64662093 -101988203 - B3A SINE B2 -8 190 1 2 1078 335 350 35 35 chrX 64662158 64662469 -101987827 - L1_Mur3 LINE L1 -2063 3817 3507 2 1078 2693 153 35 12 chrX 64662472 64662987 -101987309 + RLTR11A2 LTR ERVK 1 527 0 2 1078 5022 184 7 3 chrX 64663037 64664015 -101986281 - L1_Mur2 LINE L1 -1551 4326 3345 2 1078 7134 93 16 0 chrX 64664017 64665432 -101984864 + L1_Mus2 LINE L1 5130 6565 -1 2 1078 2293 109 5 68 chrX 64665456 64665880 -101984416 - MusHAL1 LINE L1 -537 2175 1779 2 1078 7572 192 22 7 chrX 64665879 64666259 -101984037 + Lx LINE L1 4360 4741 -1142 2 1078 4544 23 0 0 chrX 64666259 64666784 -101983512 + L1Md_A LINE L1 6057 6581 -1 2 1078 7572 157 20 6 chrX 64666784 64668662 -101981634 + Lx LINE L1 4742 6654 0 2 1078 700 290 109 26 chrX 64668734 64668798 -101981498 - Lx9 LINE L1 -1666 5978 5909 2 1078 3280 45 2 16 chrX 64668798 64669224 -101981072 + L1Md_F2 LINE L1 6151 6570 -12 2 1078 3919 221 67 63 chrX 64669224 64670605 -101979691 - Lx9 LINE L1 -1736 5908 4471 2 1078 478 207 0 43 chrX 64670627 64670768 -101979528 + Lx9 LINE L1 7508 7642 -2 2 1078 4243 30 0 0 chrX 64670965 64671623 -101978673 - L1Md_A LINE L1 -491 6091 5434 2 1078 3776 56 29 0 chrX 64671623 64672008 -101978288 + L1Md_F2 LINE L1 6086 6470 -112 2 1078 369 0 0 0 chrX 64672008 64672049 -101978247 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 2 1078 3776 56 29 0 chrX 64672049 64672145 -101978151 + L1Md_F2 LINE L1 6471 6579 -3 2 1078 893 301 5 0 chrX 64672182 64672385 -101977911 + B3 SINE B2 6 209 -7 2 1078 959 251 47 8 chrX 64672529 64672983 -101977313 - RMER5 LTR ERV1 0 534 1 2 1078 236 250 25 12 chrX 64673359 64673440 -101976856 + (TATATG)n Simple_repeat Simple_repeat 6 87 0 2 1078 317 323 43 77 chrX 64673523 64673731 -101976565 - B4 SINE B4 -89 203 3 2 1078 271 303 0 0 chrX 64673748 64673814 -101976482 - ID4 SINE ID 0 83 18 2 1078 550 331 6 17 chrX 64673907 64674082 -101976214 - MLT1C LTR MaLR -4 463 291 2 1078 11969 118 16 101 chrX 64674865 64677158 -101973138 - L1_Mur2 LINE L1 -1732 4145 2055 2 1078 348 24 0 0 chrX 64677158 64677199 -101973097 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1078 405 0 0 0 chrX 64677199 64677243 -101973053 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1078 11969 118 16 101 chrX 64677243 64677345 -101972951 - L1_Mur2 LINE L1 -3823 2054 1954 2 1078 538 126 0 37 chrX 64677349 64677456 -101972840 - Lx LINE L1 -3 6651 6549 2 1078 1910 61 0 4 chrX 64677458 64677704 -101972592 - Lx LINE L1 -624 6030 5786 2 1078 1464 151 202 0 chrX 64677701 64677973 -101972323 + Lx2 LINE L1 6311 6637 -360 2 1078 1317 161 5 0 chrX 64677976 64678199 -101972097 + Lx2 LINE L1 6773 6996 -1 2 1078 845 211 55 62 chrX 64678203 64678476 -101971820 + RMER6A LTR ERVK 285 555 -201 2 1078 1819 126 37 10 chrX 64678476 64678773 -101971523 + Lx3_Mus LINE L1 6705 7009 0 2 1078 339 254 86 43 chrX 64678887 64679027 -101971269 + L1M5 LINE L1 3545 3690 -2456 2 1078 580 299 15 0 chrX 64679060 64679197 -101971099 + B1_Mur1 SINE Alu 11 149 0 2 1078 1013 116 0 0 chrX 64679558 64679696 -101970600 + B1_Mus1 SINE Alu 2 139 -9 2 1078 23 33 0 0 chrX 64679953 64679983 -101970313 + AT_rich Low_complexity Low_complexity 1 30 0 2 1078 3357 38 0 0 chrX 64680135 64680531 -101969765 + MTA_Mm LTR MaLR 1 396 0 2 1078 522 0 0 0 chrX 64680691 64680749 -101969547 + (TA)n Simple_repeat Simple_repeat 2 59 0 2 1078 3010 135 19 8 chrX 64680759 64681236 -101969060 - Lx LINE L1 0 6654 6173 2 1078 2176 298 45 96 chrX 64681237 64682184 -101968112 + Lx8 LINE L1 6197 7095 -378 2 1078 297 339 80 24 chrX 64682578 64683041 -101967255 + L1MB8 LINE L1 5459 5947 -231 2 1078 27 96 0 0 chrX 64683128 64683211 -101967085 + AT_rich Low_complexity Low_complexity 1 83 0 2 1078 204 40 0 0 chrX 64683232 64683257 -101967039 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 1078 397 319 27 78 chrX 64684006 64684404 -101965892 + L1VL1 LINE L1 1 385 -6037 2 1078 291 264 173 0 chrX 64684462 64684572 -101965724 + L1_Mus1 LINE L1 675 803 -5813 2 1078 1225 181 12 0 chrX 64684580 64684828 -101965468 + L1_Mus1 LINE L1 725 975 -5641 2 1078 2540 13 0 0 chrX 64684819 64685119 -101965177 - L1Md_A LINE L1 -6187 537 238 2 1078 5955 3 0 0 chrX 64685116 64685782 -101964514 + L1Md_A LINE L1 4921 5586 -297 2 1078 8982 4 0 0 chrX 64685782 64686778 -101963518 + L1Md_A LINE L1 5587 6582 0 2 1078 11245 167 5 162 chrX 64686781 64687644 -101962652 + L1VL4 LINE L1 952 1714 -4163 2 1078 201 39 0 0 chrX 64687644 64687670 -101962626 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 1078 11245 196 11 115 chrX 64687670 64688006 -101962290 + L1VL4 LINE L1 1715 1720 -4157 2 1078 7584 61 13 5 chrX 64688006 64688994 -101961302 + L1Md_F2 LINE L1 5587 6582 0 2 1078 14618 126 13 7 chrX 64688994 64691389 -101958907 + L1_Mus1 LINE L1 1708 4117 -1766 2 1078 7276 108 0 1 chrX 64691385 64693031 -101957265 + L1_Mus1 LINE L1 4924 6567 0 2 1078 3779 200 89 18 chrX 64693325 64694156 -101956140 - RMER19B LTR ERVK -12 890 1 2 1078 1806 158 75 0 chrX 64694595 64694917 -101955379 + ORR1A1 LTR MaLR 1 346 0 2 1078 1576 254 54 23 chrX 64695112 64695417 -101954879 + Lx7 LINE L1 5344 5652 -228 2 1078 1447 144 27 71 chrX 64695417 64695754 -101954542 - RLTRETN_Mm LTR ERVK 0 322 1 2 1078 1576 268 59 22 chrX 64695754 64696243 -101954053 + Lx7 LINE L1 5653 6168 -1528 2 1078 605 98 20 0 chrX 64696243 64696345 -101953951 + (TATG)n Simple_repeat Simple_repeat 4 107 0 2 1078 188 67 33 0 chrX 64696357 64696387 -101953909 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1078 2499 307 70 46 chrX 64696398 64696417 -101953879 + Lx7 LINE L1 6175 6193 -1503 2 1078 270 0 0 0 chrX 64696417 64696447 -101953849 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1078 2499 307 70 46 chrX 64696447 64697546 -101952750 + Lx7 LINE L1 6194 7319 -377 2 1078 234 176 0 0 chrX 64697606 64697657 -101952639 + T-rich Low_complexity Low_complexity 1 51 0 2 1078 2710 42 6 3 chrX 64697662 64698000 -101952296 - L1Md_F3 LINE L1 -2 6582 6244 2 1078 2094 140 14 3 chrX 64698008 64698367 -101951929 - L1_Mus3 LINE L1 -6 6632 6270 2 1078 3764 109 2 0 chrX 64698369 64698929 -101951367 - Lx5 LINE L1 -1274 2640 2080 2 1078 22740 61 1 1 chrX 64698946 64701857 -101948439 + L1_Mm LINE L1 2675 5586 -297 2 1078 7859 57 2 3 chrX 64701857 64702853 -101947443 + L1Md_F2 LINE L1 5587 6581 -1 2 1078 22740 61 1 1 chrX 64702853 64702867 -101947429 + L1_Mm LINE L1 5587 5602 -281 2 1078 5261 122 31 5 chrX 64703226 64704568 -101945728 - Lx5 LINE L1 -1853 2061 676 2 1078 16411 21 0 0 chrX 64704570 64706481 -101943815 - L1Md_T LINE L1 0 5883 3973 2 1078 6173 9 0 0 chrX 64706481 64707172 -101943124 + L1Md_T LINE L1 5892 6582 0 2 1078 2790 236 34 39 chrX 64707179 64708090 -101942206 - Lx5 LINE L1 -12 7038 6416 2 1078 315 121 0 0 chrX 64708093 64708151 -101942145 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 1078 22 56 0 0 chrX 64708223 64708259 -101942037 + AT_rich Low_complexity Low_complexity 1 36 0 2 1078 4418 78 3 16 chrX 64708433 64709060 -101941236 + L1Md_F2 LINE L1 5954 6572 -10 2 1078 238 275 28 28 chrX 64709080 64709151 -101941145 + PB1D10 SINE Alu 47 117 0 2 1078 180 176 0 0 chrX 64709504 64709538 -101940758 + A-rich Low_complexity Low_complexity 1 34 0 2 1078 2657 218 96 29 chrX 64709799 64710276 -101940020 - Lx6 LINE L1 -150 7546 6757 2 1078 1162 72 12 0 chrX 64710276 64710442 -101939854 + (TCTA)n Simple_repeat Simple_repeat 4 171 0 2 1078 2657 214 104 28 chrX 64710442 64710622 -101939674 - Lx6 LINE L1 -704 6756 6582 2 1078 213 139 0 0 chrX 64711699 64711742 -101938554 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 1078 213 250 0 0 chrX 64712093 64712141 -101938155 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 1078 417 198 0 0 chrX 64712588 64712679 -101937617 + (TA)n Simple_repeat Simple_repeat 1 91 0 2 1078 325 173 0 0 chrX 64712679 64712731 -101937565 + HAL1-3A_ME LINE L1 1975 2026 -832 2 1078 418 368 89 9 chrX 64712827 64713041 -101937255 - B4A SINE B4 -2 290 60 2 1078 500 45 15 0 chrX 64713137 64713204 -101937092 + (TC)n Simple_repeat Simple_repeat 2 69 0 2 1078 246 32 0 0 chrX 64713204 64713234 -101937062 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1078 641 327 63 24 chrX 64713234 64713695 -101936601 - L1M2 LINE L1 -879 5264 4786 2 1078 214 346 0 24 chrX 64714704 64714787 -101935509 + (CATA)n Simple_repeat Simple_repeat 2 82 0 2 1078 180 163 0 0 chrX 64714788 64714831 -101935465 + GA-rich Low_complexity Low_complexity 2 44 0 2 1078 351 44 0 0 chrX 64714873 64714918 -101935378 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1078 315 0 0 0 chrX 64715037 64715072 -101935224 + (A)n Simple_repeat Simple_repeat 1 35 0 2 1078 5734 51 32 0 chrX 64715329 64716068 -101934228 - L1Md_F2 LINE L1 -1 6581 5819 2 1078 940 99 0 13 chrX 64716408 64716561 -101933735 + (TTTC)n Simple_repeat Simple_repeat 4 154 0 3 1078 1035 143 5 71 chrX 64716569 64716765 -101933531 - Lx4A LINE L1 -16 7042 6860 3 1078 227 381 0 0 chrX 64716784 64716868 -101933428 + RSINE1 SINE B4 2 85 -80 3 1078 1091 128 18 0 chrX 64716795 64716959 -101933337 + B2_Mm2 SINE B2 12 178 -17 3 1078 35794 45 0 3 chrX 64718227 64724680 -101925616 - L1Md_T LINE L1 0 6585 56 3 1078 192 77 0 0 chrX 64725261 64725287 -101925009 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 3 1078 35 63 0 0 chrX 64725290 64725353 -101924943 + AT_rich Low_complexity Low_complexity 1 63 0 3 1078 4845 108 10 12 chrX 64725461 64726180 -101924116 - Lx3A LINE L1 -160 6821 6105 3 1078 430 194 45 27 chrX 64726173 64726284 -101924012 - L1_Mur2 LINE L1 -3008 2869 2757 3 1078 378 0 0 0 chrX 64726285 64726327 -101923969 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1078 11416 180 179 15 chrX 64726327 64727322 -101922974 + Lx LINE L1 2544 3391 -2495 3 1078 4268 8 0 66 chrX 64727322 64727850 -101922446 + MT2_Mm LTR ERVL 1 493 0 3 1078 11416 167 143 9 chrX 64727850 64730542 -101919754 + Lx LINE L1 3392 6654 0 3 1078 1879 267 39 39 chrX 64730529 64731117 -101919179 + Lx6 LINE L1 5779 6366 -1094 3 1078 270 216 0 0 chrX 64731117 64731168 -101919128 - RMER6D LTR ERVK -669 51 1 3 1078 305 114 0 0 chrX 64731168 64731212 -101919084 + RMER6-int LTR ERVK 864 907 -2270 3 1078 301 270 176 0 chrX 64731219 64731367 -101918929 - L1_Mur3 LINE L1 -1945 3935 3762 3 1078 711 282 55 19 chrX 64731405 64731712 -101918584 - Lx9 LINE L1 -8 7636 7319 3 1078 393 229 8 33 chrX 64731777 64731899 -101918397 - L1M4 LINE L1 -2406 3740 3622 3 1078 3286 154 146 53 chrX 64731899 64732402 -101917894 + RMER6A LTR ERVK 1 588 -168 3 1078 1142 65 0 0 chrX 64732402 64732540 -101917756 + B1_Mm SINE Alu 1 138 -9 3 1078 3286 155 91 57 chrX 64732540 64732738 -101917558 + RMER6A LTR ERVK 589 756 0 3 1078 247 272 164 12 chrX 64733020 64733191 -101917105 + L1MDb LINE L1 1001 1197 -5212 3 1078 368 284 129 51 chrX 64733408 64733664 -101916632 - L1MD LINE L1 -3523 2623 2348 3 1078 21 82 0 0 chrX 64733754 64733803 -101916493 + AT_rich Low_complexity Low_complexity 1 49 0 3 1078 322 314 40 67 chrX 64734112 64734262 -101916034 + Tigger5 DNA MER2_type 12 157 -2249 3 1078 262 367 0 0 chrX 64734302 64734381 -101915915 + Tigger5 DNA MER2_type 2290 2368 -38 3 1078 31 44 0 0 chrX 64734721 64734766 -101915530 + AT_rich Low_complexity Low_complexity 1 45 0 3 1078 23926 148 12 76 chrX 64734840 64741556 -101908740 - L1_Mus3 LINE L1 -13 6625 365 3 1078 596 186 7 69 chrX 64741557 64741701 -101908595 - Lx2 LINE L1 -20 6977 6843 3 1078 2265 78 6 6 chrX 64741844 64742167 -101908129 - L1_Mus2 LINE L1 0 6566 6244 3 1078 200 356 76 35 chrX 64742473 64742671 -101907625 + L2 LINE L2 2311 2516 -903 3 1078 464 395 26 5 chrX 64742680 64742871 -101907425 + LTR16B2 LTR ERVL 3 197 -265 3 1078 246 276 31 31 chrX 64743013 64743110 -101907186 - L1_Mur3 LINE L1 -1826 4054 3958 3 1078 409 134 0 0 chrX 64743117 64743184 -101907112 - L1_Rod LINE L1 -2492 3355 3289 3 1078 487 326 122 41 chrX 64743377 64743663 -101906633 + Lx8 LINE L1 5874 6186 -1287 3 1078 366 129 0 0 chrX 64743663 64743725 -101906571 + (CATA)n Simple_repeat Simple_repeat 3 64 0 3 1078 487 326 122 41 chrX 64743725 64743921 -101906375 + Lx8 LINE L1 6187 6394 -1079 3 1078 531 280 35 14 chrX 64744052 64744197 -101906099 - Lx8 LINE L1 -147 7326 7179 3 1078 1221 106 5 0 chrX 64744468 64744686 -101905610 + (TTTC)n Simple_repeat Simple_repeat 1 219 0 3 1078 558 72 0 40 chrX 64744695 64744796 -101905500 - L1Md_F2 LINE L1 -1 6581 6485 3 1078 4312 24 0 0 chrX 64744796 64745289 -101905007 + MT2_Mm LTR ERVL 1 493 0 3 134 34009 77 11 1 chrX 64745289 64750563 -101899733 + MERVL_2A-int LTR ERVL 1 5453 -308 3 1079 327 153 26 53 chrX 64750581 64750657 -101899639 + ORR1A3-int LTR MaLR 567 640 -1323 3 1079 303 26 0 0 chrX 64750657 64750695 -101899601 + MERVL_2A-int LTR ERVL 5448 5485 0 3 1079 4380 18 0 0 chrX 64750695 64751188 -101899108 + MT2_Mm LTR ERVL 1 493 0 3 1079 4661 35 0 0 chrX 64751188 64751731 -101898565 - L1Md_F2 LINE L1 -93 6489 5947 3 1079 1506 332 29 22 chrX 64751816 64752404 -101897892 + Lx8 LINE L1 6537 7128 -345 3 1079 4660 70 15 11 chrX 64752407 64753055 -101897241 + RLTR22_Mus LTR ERVK 1 651 -1157 3 1079 3552 149 24 102 chrX 64753056 64754056 -101896240 + RMER17A2 LTR ERVK 4 866 -23 3 1079 7108 109 34 78 chrX 64754072 64754508 -101895788 + RLTR22_Mur LTR ERVK 637 1038 -810 3 1079 2396 40 27 0 chrX 64754508 64754806 -101895490 + L1Md_A LINE L1 6276 6581 -1 3 1079 7108 109 34 78 chrX 64754806 64755633 -101894663 + RLTR22_Mur LTR ERVK 1039 1844 -4 3 1079 751 269 82 42 chrX 64755656 64755761 -101894535 + Lx8 LINE L1 7131 7235 -238 3 1079 522 0 0 0 chrX 64755761 64755819 -101894477 + (TTTTG)n Simple_repeat Simple_repeat 2 59 0 3 1079 751 269 82 42 chrX 64755819 64756043 -101894253 + Lx8 LINE L1 7236 7472 -1 3 1079 570 372 32 43 chrX 64756501 64756964 -101893332 + ERVL-E-int LTR ERVL 2630 3087 -2580 3 1079 342 355 21 14 chrX 64757003 64757146 -101893150 - B1F SINE Alu -5 144 1 3 1079 268 380 42 49 chrX 64757235 64757523 -101892773 + ORR1D2 LTR MaLR 85 370 0 3 1079 24 32 0 0 chrX 64757784 64757815 -101892481 + AT_rich Low_complexity Low_complexity 1 31 0 3 1079 427 306 120 51 chrX 64757828 64758438 -101891858 - L1M2 LINE L1 -845 5298 4639 3 1079 557 107 0 97 chrX 64758438 64758562 -101891734 + Lx LINE L1 6540 6651 -3 3 1079 427 306 120 51 chrX 64758562 64758682 -101891614 - L1M2 LINE L1 -1505 4638 4517 3 1079 2331 302 130 20 chrX 64759073 64759932 -101890364 + MTE-int LTR MaLR 66 1004 -576 3 1079 3288 235 75 42 chrX 64759932 64760245 -101890051 + Lx7 LINE L1 4870 5216 -664 3 1079 1162 173 4 30 chrX 64760245 64760477 -101889819 + URR1A DNA MER1_type 1 226 0 3 1079 3288 235 75 42 chrX 64760477 64760891 -101889405 + Lx7 LINE L1 5217 5628 -252 3 1079 212 0 36 0 chrX 64760891 64760919 -101889377 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1079 1093 74 0 0 chrX 64760920 64761055 -101889241 - B1_Mus1 SINE Alu -12 136 2 3 1079 3288 247 77 51 chrX 64761055 64761323 -101888973 + Lx7 LINE L1 5629 5905 -1791 3 1079 1100 79 12 6 chrX 64761323 64761488 -101888808 + L1_Mus1 LINE L1 6400 6565 -2 3 1079 1182 317 87 113 chrX 64761488 64762564 -101887732 + Lx7 LINE L1 5906 6949 -747 3 1079 1780 193 234 26 chrX 64762611 64763153 -101887143 - RMER6C LTR ERVK -32 658 4 3 1079 636 253 61 6 chrX 64763156 64763319 -101886977 + Lx7 LINE L1 7127 7298 -398 3 1079 315 254 23 15 chrX 64763331 64763463 -101886833 + (TTTG)n Simple_repeat Simple_repeat 4 136 0 3 1079 22 0 0 0 chrX 64763560 64763582 -101886714 + AT_rich Low_complexity Low_complexity 1 22 0 3 1079 299 183 451 0 chrX 64763681 64763763 -101886533 + ORR1D1-int LTR MaLR 775 893 -477 3 1079 4112 139 18 14 chrX 64763763 64764669 -101885627 + L1_Mur2 LINE L1 579 1491 -4386 3 1079 2376 106 82 0 chrX 64764666 64765045 -101885251 - L1_Mur2 LINE L1 -1258 4619 4210 3 1079 6663 142 22 2 chrX 64765041 64766260 -101884036 + Lx4A LINE L1 5491 6748 -310 3 1079 399 261 45 0 chrX 64766260 64766371 -101883925 + ORR1D1 LTR MaLR 257 372 -2 3 1079 318 250 151 25 chrX 64766860 64766979 -101883317 - ORR1E LTR MaLR -12 367 234 3 1079 470 340 22 0 chrX 64767251 64767436 -101882860 - ORR1E LTR MaLR -168 191 3 3 1079 207 0 0 0 chrX 64767536 64767559 -101882737 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1079 1926 270 74 82 chrX 64767612 64768451 -101881845 - RMER1C Other Other -1 1341 510 3 1079 1659 171 55 87 chrX 64768573 64768939 -101881357 + ORR1B1 LTR MaLR 41 394 0 3 1079 542 319 40 33 chrX 64768940 64769215 -101881081 - RMER1B Other Other -203 863 587 3 1079 1121 103 0 0 chrX 64769323 64769469 -101880827 + B1_Mus1 SINE Alu 2 147 -1 3 1079 345 109 0 0 chrX 64769697 64769752 -101880544 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1079 23 0 0 0 chrX 64770496 64770519 -101879777 + AT_rich Low_complexity Low_complexity 1 23 0 3 1079 30 69 0 0 chrX 64771277 64771335 -101878961 + AT_rich Low_complexity Low_complexity 1 58 0 3 1079 267 31 0 0 chrX 64771411 64771443 -101878853 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1079 6874 187 43 14 chrX 64771492 64772806 -101877490 - Lx5 LINE L1 -58 6992 5641 3 1079 1232 320 28 39 chrX 64772815 64773462 -101876834 - Lx9 LINE L1 -640 7004 6221 3 1079 525 230 0 0 chrX 64773473 64773599 -101876697 + (TA)n Simple_repeat Simple_repeat 2 127 0 3 1079 506 16 16 0 chrX 64773599 64773662 -101876634 + (GA)n Simple_repeat Simple_repeat 2 65 0 3 1079 10924 157 44 11 chrX 64773662 64775803 -101874493 - Lx4A LINE L1 -98 6960 4726 3 1079 461 17 17 0 chrX 64775803 64775861 -101874435 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 3 1079 10924 150 51 11 chrX 64775861 64776811 -101873485 - Lx4A LINE L1 -1152 4725 3740 3 1079 4399 209 86 26 chrX 64777830 64777923 -101872373 - RMER1A Other Other -3 1027 910 3 1079 462 18 0 0 chrX 64777923 64777978 -101872318 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1079 4399 209 86 26 chrX 64777978 64778853 -101871443 - RMER1A Other Other -121 909 2 3 1079 1581 306 27 39 chrX 64778871 64779637 -101870659 - RMER1B Other Other -474 592 6 3 1079 473 172 126 40 chrX 64779690 64779841 -101870455 + MTC-int LTR MaLR 1087 1250 -8 3 1079 330 336 79 8 chrX 64779887 64779951 -101870345 + MTD LTR MaLR 47 111 -308 3 1079 414 0 0 0 chrX 64779951 64779997 -101870299 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 3 1079 330 336 79 8 chrX 64779997 64780058 -101870238 + MTD LTR MaLR 112 180 -239 3 1079 1201 184 9 30 chrX 64780067 64780137 -101870159 + URR1B DNA MER1_type 1 66 -159 3 1079 1839 170 139 91 chrX 64780137 64780642 -101869654 - RLTR24 LTR ERV1 0 529 1 3 1079 1201 184 9 30 chrX 64780642 64780801 -101869495 + URR1B DNA MER1_type 67 225 0 3 1079 449 248 112 32 chrX 64780884 64781009 -101869287 + MTD LTR MaLR 280 414 -5 3 1079 21 89 0 0 chrX 64781386 64781442 -101868854 + AT_rich Low_complexity Low_complexity 1 56 0 3 1079 4595 108 14 3 chrX 64781549 64782238 -101868058 - L1_Mus3 LINE L1 -2 6636 5940 3 1079 250 0 100 0 chrX 64782239 64782279 -101868017 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 3 1079 378 129 0 0 chrX 64782775 64782837 -101867459 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 3 1079 10275 32 1 10 chrX 64782837 64784407 -101865889 - L1Md_A LINE L1 -3418 2465 944 3 1079 3515 58 5 0 chrX 64784407 64784841 -101865455 + RLTR10C LTR ERVK 1 436 0 3 1079 6541 58 3 53 chrX 64784841 64785330 -101864966 - L1Md_A LINE L1 -5781 943 453 3 1079 295 327 31 31 chrX 64785357 64785518 -101864778 + Lx9 LINE L1 6674 6834 -810 3 1079 1329 284 56 33 chrX 64785534 64786073 -101864223 + Lx9 LINE L1 6967 7517 -127 3 1079 375 78 0 0 chrX 64786089 64786140 -101864156 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1079 893 260 284 20 chrX 64786422 64786978 -101863318 + Lx6 LINE L1 6756 7459 -1 3 1079 2221 175 30 11 chrX 64787029 64787463 -101862833 + Lx2 LINE L1 6551 6992 -5 3 1079 26124 111 10 7 chrX 64787496 64792568 -101857728 + L1VL1 LINE L1 217 5304 -579 3 1079 1590 21 0 0 chrX 64792568 64792754 -101857542 + L1_Mm LINE L1 2187 2372 -3511 3 1079 3209 26 2 47 chrX 64792754 64793162 -101857134 - RLTR10 LTR ERVK 0 390 1 3 1079 16736 34 3 11 chrX 64793164 64795178 -101855118 - RLTR10-int LTR ERVK -3 1984 9 3 1079 3226 34 5 5 chrX 64795179 64795569 -101854727 - RLTR10 LTR ERVK 0 390 1 3 1079 25569 36 17 103 chrX 64795569 64796898 -101853398 + L1_Mus2 LINE L1 2367 3694 -2189 4 1079 3388 30 2 0 chrX 64796898 64797293 -101853003 - MTA_Mm LTR MaLR 0 396 1 4 1079 9550 17 1 0 chrX 64797293 64798390 -101851906 - MTA_Mm-int LTR MaLR 0 1098 1 4 1079 3362 33 2 0 chrX 64798390 64798785 -101851511 - MTA_Mm LTR MaLR 0 396 1 4 1079 25569 36 17 103 chrX 64798785 64799963 -101850333 + L1_Mus2 LINE L1 3695 4908 -975 4 1079 233 183 46 77 chrX 64799963 64800028 -101850268 - RMER20A LTR ERVK -268 248 186 4 1079 25569 36 17 103 chrX 64800028 64800682 -101849614 + L1_Mus2 LINE L1 4909 5584 -299 4 1079 7971 57 0 0 chrX 64800682 64801678 -101848618 + L1Md_T LINE L1 5587 6582 0 4 1079 1596 45 0 0 chrX 64801676 64801878 -101848418 + L1Md_A LINE L1 6381 6582 0 4 1079 25569 66 10 52 chrX 64801878 64803179 -101847117 + L1_Mus2 LINE L1 5585 6565 -1 4 1079 225 178 0 0 chrX 64803282 64803327 -101846969 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 1079 7703 64 0 2 chrX 64803474 64804615 -101845681 - L1Md_F2 LINE L1 -12 6570 5434 4 1079 267 294 104 47 chrX 64804711 64804922 -101845374 - L1M4 LINE L1 -479 5705 5483 4 1079 233 118 20 0 chrX 64805148 64805199 -101845097 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1079 21 0 0 0 chrX 64805782 64805803 -101844493 + AT_rich Low_complexity Low_complexity 1 21 0 4 1079 437 340 91 51 chrX 64805822 64806175 -101844121 - L1ME2 LINE L1 -65 6099 5733 4 1079 412 333 57 38 chrX 64806239 64806448 -101843848 + L1MC3 LINE L1 7504 7716 -69 4 1079 210 143 0 0 chrX 64806664 64806699 -101843597 + (A)n Simple_repeat Simple_repeat 1 35 0 4 1079 1137 237 113 7 chrX 64806770 64807072 -101843224 + RMER16 LTR ERVK 198 531 -2 4 1079 703 302 54 0 chrX 64807548 64807753 -101842543 - B3 SINE B2 0 216 1 4 1079 494 290 60 5 chrX 64807859 64808060 -101842236 + Lx7 LINE L1 5617 5828 -1868 4 1079 21 57 0 0 chrX 64808188 64808223 -101842073 + AT_rich Low_complexity Low_complexity 1 35 0 4 1079 1812 131 7 3 chrX 64808536 64808826 -101841470 - L1_Mus3 LINE L1 -1 6637 6347 4 1079 1503 278 47 34 chrX 64809056 64809526 -101840770 + Lx7 LINE L1 6178 6653 -1043 4 1079 2331 89 6 0 chrX 64809527 64809842 -101840454 + ORR1A2 LTR MaLR 3 319 -8 4 1079 1916 289 90 6 chrX 64809843 64810467 -101839829 + Lx7 LINE L1 6645 7320 -376 4 1079 237 273 58 64 chrX 64810522 64810694 -101839602 + Lx7 LINE L1 7511 7681 -15 4 1079 184 410 0 0 chrX 64810704 64810765 -101839531 - L2 LINE L2 -623 2796 2736 4 1079 321 352 89 46 chrX 64810855 64811224 -101839072 - HAL1b LINE L1 -644 1365 981 4 1079 290 282 0 22 chrX 64811408 64811535 -101838761 + L1MD3 LINE L1 5991 6130 -1865 4 1079 267 31 0 0 chrX 64811615 64811647 -101838649 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1079 246 95 0 0 chrX 64811647 64811689 -101838607 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 1079 379 247 113 0 chrX 64811824 64811921 -101838375 - Lx7 LINE L1 -768 6928 6821 4 1079 289 292 32 32 chrX 64811937 64812061 -101838235 + Lx7 LINE L1 7188 7311 -385 4 1079 551 191 0 18 chrX 64812106 64812209 -101838087 + ORR1B1 LTR MaLR 41 141 -253 4 1079 1621 184 68 6 chrX 64812209 64812532 -101837764 - RLTR15 LTR ERVK 0 359 17 4 1079 276 130 0 0 chrX 64812532 64812578 -101837718 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1079 1214 188 15 66 chrX 64812596 64812869 -101837427 + ORR1B1 LTR MaLR 136 394 0 4 1079 194 0 0 37 chrX 64812930 64812957 -101837339 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 1079 457 246 52 37 chrX 64812960 64813095 -101837201 - B1_Mus1 SINE Alu -10 138 2 4 1079 671 272 58 47 chrX 64813097 64813764 -101836532 - L1_Mur3 LINE L1 -4284 1596 910 4 1079 1497 221 70 6 chrX 64814341 64814696 -101835600 - RMER6D LTR ERVK -4 716 339 4 1079 522 204 167 36 chrX 64814695 64814724 -101835572 - RMER6D LTR ERVK -524 166 129 4 1079 324 0 0 0 chrX 64814724 64814760 -101835536 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1079 522 175 169 31 chrX 64814760 64814876 -101835420 - RMER6D LTR ERVK -592 128 4 4 1079 824 322 40 27 chrX 64814947 64815540 -101834756 - L1MB8 LINE L1 -101 6077 5472 4 1079 279 111 0 0 chrX 64815534 64815579 -101834717 + Lx3A LINE L1 2102 2146 -3731 4 1079 34 24 0 0 chrX 64815635 64815676 -101834620 + AT_rich Low_complexity Low_complexity 1 41 0 4 1079 22211 128 18 8 chrX 64815676 64818131 -101832165 + Lx3A LINE L1 2149 4638 -1248 4 1079 293 0 27 0 chrX 64818131 64818168 -101832128 + (CAA)n Simple_repeat Simple_repeat 2 39 0 4 1079 22211 132 36 9 chrX 64818168 64820391 -101829905 + Lx3A LINE L1 4639 6927 -54 4 1079 816 101 0 0 chrX 64820391 64820529 -101829767 + (GA)n Simple_repeat Simple_repeat 2 139 0 4 1079 2934 175 44 7 chrX 64820545 64821190 -101829106 - L1_Mur1 LINE L1 -6495 1231 207 4 1079 3846 240 17 30 chrX 64821224 64821376 -101828920 - Lx5 LINE L1 -4 7046 6899 4 1079 459 35 0 0 chrX 64821376 64821433 -101828863 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1079 3846 240 17 30 chrX 64821433 64822168 -101828128 - Lx5 LINE L1 -152 6898 6171 4 1079 30 27 0 0 chrX 64822239 64822276 -101828020 + AT_rich Low_complexity Low_complexity 1 37 0 4 1079 34 42 0 0 chrX 64822374 64822422 -101827874 + AT_rich Low_complexity Low_complexity 1 48 0 4 1079 2658 40 0 6 chrX 64822452 64822776 -101827520 + L1Md_A LINE L1 5265 5586 -297 4 1079 8600 25 0 0 chrX 64822777 64823772 -101826524 + L1Md_A LINE L1 5588 6582 0 4 1079 237 139 0 0 chrX 64823779 64823822 -101826474 + (A)n Simple_repeat Simple_repeat 1 43 0 4 1079 29 60 0 0 chrX 64824253 64824303 -101825993 + AT_rich Low_complexity Low_complexity 1 50 0 4 1079 246 32 0 0 chrX 64824401 64824432 -101825864 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1079 282 56 0 0 chrX 64824643 64824679 -101825617 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1079 286 53 0 0 chrX 64824872 64824910 -101825386 + U2 snRNA snRNA 1 38 -150 4 1079 326 326 70 70 chrX 64825230 64825372 -101824924 + B1_Mur1 SINE Alu 1 142 -7 4 1079 222 105 0 0 chrX 64825425 64825463 -101824833 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 4 1079 434 290 107 0 chrX 64825486 64825617 -101824679 + RSINE1 SINE B4 3 147 -18 4 1079 1540 184 206 0 chrX 64825647 64826012 -101824284 + Lx9 LINE L1 7177 7616 -28 4 1079 21 0 0 0 chrX 64826634 64826655 -101823641 + AT_rich Low_complexity Low_complexity 1 21 0 4 1079 3312 80 0 34 chrX 64827111 64827580 -101822716 + L1Md_F2 LINE L1 6107 6559 -23 4 1079 1552 225 39 14 chrX 64827751 64828112 -101822184 - ORR1D1 LTR MaLR -4 370 1 4 1079 32425 95 13 6 chrX 64828210 64834357 -101815939 - L1Md_F2 LINE L1 0 6582 390 4 1079 311 310 56 17 chrX 64834646 64834879 -101815417 - L1M5 LINE L1 -1555 4591 4350 4 1079 285 337 12 0 chrX 64834886 64834969 -101815327 - ID SINE ID -139 85 2 4 1079 400 313 85 36 chrX 64835892 64836303 -101813993 - L1MB4 LINE L1 -80 6100 5670 4 1079 234 331 47 55 chrX 64837196 64837324 -101812972 - B1_Mus1 SINE Alu -15 133 7 4 1079 281 312 125 5 chrX 64837385 64837585 -101812711 - L1MC4 LINE L1 -289 7753 7530 4 1079 245 174 169 28 chrX 64837966 64838037 -101812259 + MTD LTR MaLR 6 86 -333 4 1079 262 343 59 0 chrX 64838262 64838364 -101811932 - PB1D7 SINE Alu -10 110 3 4 1079 209 146 21 0 chrX 64838398 64838446 -101811850 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1079 1479 288 63 40 chrX 64838502 64839154 -101811142 - Lx8 LINE L1 -1 7472 6806 4 1079 5847 128 37 17 chrX 64839199 64840141 -101810155 + Lx LINE L1 5687 6647 -7 4 1079 281 146 0 20 chrX 64841518 64841567 -101808729 - MIR3 SINE MIR -2 206 159 4 1079 236 383 71 48 chrX 64841700 64842051 -101808245 - ORR1E LTR MaLR 0 359 1 4 1079 651 120 0 0 chrX 64842072 64842180 -101808116 + (TG)n Simple_repeat Simple_repeat 2 109 0 4 1079 23 0 0 0 chrX 64842567 64842590 -101807706 + AT_rich Low_complexity Low_complexity 1 23 0 4 1079 267 246 0 0 chrX 64845475 64845536 -101804760 + L1M4 LINE L1 4900 4960 -1186 4 1079 1760 138 155 9 chrX 64845838 64846173 -101804123 + ORR1B1 LTR MaLR 3 386 -8 4 1079 2359 298 84 81 chrX 64846574 64848075 -101802221 - RMER1A Other Other -18 1012 1 4 1079 406 285 139 36 chrX 64848860 64849140 -101801156 + HAL1 LINE L1 1886 2194 -313 4 1079 25 0 0 0 chrX 64849296 64849321 -101800975 + AT_rich Low_complexity Low_complexity 1 25 0 4 1079 4200 190 30 49 chrX 64849605 64850114 -101800182 + Lx5 LINE L1 4959 5454 -423 4 1079 302 61 20 0 chrX 64850114 64850163 -101800133 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 4 1079 6208 198 56 19 chrX 64850163 64851588 -101798708 + Lx5 LINE L1 5455 6948 -102 4 1079 22 56 0 0 chrX 64851623 64851659 -101798637 + AT_rich Low_complexity Low_complexity 1 36 0 4 1079 458 295 57 38 chrX 64852005 64852269 -101798027 - L1MC1 LINE L1 -8 6325 6057 4 1079 26 50 0 0 chrX 64852295 64852335 -101797961 + AT_rich Low_complexity Low_complexity 1 40 0 4 1079 300 53 0 0 chrX 64852525 64852563 -101797733 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 4 1079 2195 184 39 0 chrX 64852576 64852940 -101797356 - Lx5 LINE L1 -140 6910 6533 4 1079 1052 198 35 16 chrX 64852938 64853194 -101797102 + Lx5 LINE L1 5902 6162 -888 4 1079 2177 184 63 67 chrX 64853200 64853769 -101796527 - RMER17C-int LTR ERVK -65 3173 2607 4 1079 328 189 0 0 chrX 64853886 64853939 -101796357 + LSU-rRNA_Hsa rRNA rRNA 4200 4252 -783 4 1079 506 171 60 53 chrX 64853940 64854121 -101796175 - RMER17C-int LTR ERVK -707 2531 2261 4 1079 1063 231 17 16 chrX 64854367 64854647 -101795649 + Lx5 LINE L1 6687 6990 -68 4 1079 4521 124 20 4 chrX 64855341 64856054 -101794242 - Lx2 LINE L1 -442 6555 5832 4 1079 814 145 6 40 chrX 64856044 64856217 -101794079 + L1_Mur2 LINE L1 5142 5308 -569 4 1079 241 305 104 78 chrX 64856270 64856462 -101793834 + Lx8 LINE L1 6976 7172 -301 4 1079 716 211 53 18 chrX 64856463 64856632 -101793664 - MTC LTR MaLR 0 421 247 4 1079 306 0 0 0 chrX 64856641 64856675 -101793621 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1079 1233 227 48 11 chrX 64856675 64856980 -101793316 - MTC LTR MaLR -35 386 70 4 1079 8261 43 0 1 chrX 64856981 64858587 -101791709 - L1Md_F3 LINE L1 -20 6564 4959 4 1079 1812 65 0 0 chrX 64858584 64858815 -101791481 + L1Md_F3 LINE L1 4713 4943 -940 4 1079 453 222 30 20 chrX 64858815 64858916 -101791380 - MTC LTR MaLR -319 102 1 4 1079 989 220 50 0 chrX 64858916 64859130 -101791166 - MTC-int LTR MaLR -259 999 775 4 1079 5789 73 6 10 chrX 64859130 64859919 -101790377 - L1Md_F2 LINE L1 0 6582 5797 4 1079 3218 95 0 4 chrX 64859922 64860375 -101789921 + L1_Mm LINE L1 5082 5532 -351 4 1079 180 291 152 0 chrX 64860469 64860548 -101789748 - L2 LINE L2 -3212 207 117 4 1079 1138 61 0 0 chrX 64861313 64861460 -101788836 + B1_Mus2 SINE Alu 1 147 0 4 1079 234 0 0 0 chrX 64861460 64861486 -101788810 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1079 1365 136 19 67 chrX 64861693 64861947 -101788349 + Lx5 LINE L1 5474 5712 -165 5 1079 528 16 0 0 chrX 64861947 64862008 -101788288 + (TA)n Simple_repeat Simple_repeat 2 62 0 5 1079 1365 136 19 67 chrX 64862008 64862022 -101788274 + Lx5 LINE L1 5713 5729 -148 5 1079 7249 85 7 0 chrX 64862010 64863318 -101786978 + L1_Mus1 LINE L1 5251 6565 -2 5 1079 2149 216 66 19 chrX 64863329 64863857 -101786439 + Lx5 LINE L1 5783 6335 -715 5 1079 350 259 43 8 chrX 64863858 64863975 -101786321 + ORR1D2 LTR MaLR 238 358 -12 5 1079 336 182 253 25 chrX 64866400 64866602 -101783694 - L1_Mur3 LINE L1 -1322 4558 4267 5 1079 483 350 8 0 chrX 64866645 64866762 -101783534 + RSINE1 SINE B4 46 163 -2 5 1079 23 33 0 0 chrX 64866843 64866873 -101783423 + AT_rich Low_complexity Low_complexity 1 30 0 5 1079 1319 150 78 8 chrX 64867188 64867430 -101782866 + RLTR17 LTR ERVK 1 259 -433 5 1079 533 150 44 15 chrX 64869478 64869490 -101780806 + Lx9 LINE L1 7506 7516 -128 5 1079 195 100 0 0 chrX 64869490 64869520 -101780776 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 1079 533 150 44 15 chrX 64869520 64869642 -101780654 + Lx9 LINE L1 7517 7644 0 5 1079 386 85 17 0 chrX 64869860 64869919 -101780377 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1079 583 247 64 80 chrX 64869921 64870289 -101780007 + RMER12 LTR ERVK 813 1227 -95 5 1079 213 305 117 17 chrX 64870394 64870408 -101779888 - B4 SINE B4 -63 229 98 5 1079 435 186 5 32 chrX 64870408 64870514 -101779782 - B1_Mus1 SINE Alu -12 108 13 5 1079 7034 49 0 1 chrX 64870833 64871720 -101778576 - L1_Mm LINE L1 -1119 4764 3879 5 1079 510 339 81 19 chrX 64873038 64873297 -101776999 + MLT2D LTR ERVL 95 369 -45 5 1079 330 26 0 0 chrX 64873472 64873511 -101776785 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 1079 359 179 0 50 chrX 64873511 64873611 -101776685 + Lx9 LINE L1 7519 7613 -31 5 1079 2181 89 119 11 chrX 64874777 64875129 -101775167 + RLTR10 LTR ERVK 1 390 0 5 1079 4266 48 27 18 chrX 64875129 64875680 -101774616 + RLTR10-int LTR ERVK 302 857 -1130 5 1079 367 321 19 19 chrX 64875800 64875959 -101774337 + IAP-d-int LTR ERVK 3536 3694 -2848 5 1079 8747 20 2 0 chrX 64876285 64877281 -101773015 + RLTR10-int LTR ERVK 990 1987 0 5 1079 2294 72 119 11 chrX 64877281 64877633 -101772663 + RLTR10 LTR ERVK 1 390 0 5 1079 263 224 43 29 chrX 64878200 64878269 -101772027 - Lx7 LINE L1 0 7696 7627 5 1079 5435 241 26 15 chrX 64878372 64879403 -101770893 - Lx7 LINE L1 -285 7411 6367 5 1079 3187 31 7 34 chrX 64879403 64879810 -101770486 - MTA_Mm LTR MaLR 0 396 1 5 1079 5435 241 26 15 chrX 64879810 64880023 -101770273 - Lx7 LINE L1 -1330 6366 6153 5 1079 246 62 0 0 chrX 64880413 64880445 -101769851 + (TATG)n Simple_repeat Simple_repeat 1 32 0 5 1080 9169 122 18 9 chrX 64880912 64882588 -101767708 - L1_Mus3 LINE L1 -6 6632 4935 5 1080 6145 78 0 5 chrX 64882588 64883411 -101766885 + L1Md_F2 LINE L1 5752 6570 -12 5 1080 9169 156 21 13 chrX 64883411 64884121 -101766175 - L1_Mus3 LINE L1 -949 4934 4230 5 1080 2165 126 19 3 chrX 64884121 64884496 -101765800 + MusHAL1 LINE L1 1765 2145 -567 5 1080 1532 152 0 105 chrX 64884496 64884811 -101765485 + RLTR23 LTR ERV1 149 430 0 5 1080 207 0 0 0 chrX 64885003 64885026 -101765270 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1080 1476 312 64 46 chrX 64885545 64886543 -101763753 - L1_Rod LINE L1 0 5847 4832 5 1080 380 292 62 35 chrX 64886552 64886779 -101763517 - L1_Mur3 LINE L1 -1997 3883 3651 5 1080 288 263 10 10 chrX 64886795 64886891 -101763405 + CT-rich Low_complexity Low_complexity 1 96 0 5 1080 3703 189 63 30 chrX 64886922 64887835 -101762461 - RMER3D-int LTR ERVK -629 2213 1270 5 1080 1286 224 47 22 chrX 64887835 64888154 -101762142 + Lx5 LINE L1 6719 7045 -5 5 1080 310 260 103 70 chrX 64889725 64889998 -101760298 + L1MC5 LINE L1 7451 7732 -229 5 1080 777 98 15 15 chrX 64890042 64890176 -101760120 - L1Md_F2 LINE L1 0 6582 6449 5 1080 2945 180 48 20 chrX 64890341 64890903 -101759393 + RMER1A Other Other 453 1030 0 5 1080 187 140 0 39 chrX 64891518 64891570 -101758726 + A-rich Low_complexity Low_complexity 1 50 0 5 1080 329 280 49 80 chrX 64891585 64891748 -101758548 - Lx7 LINE L1 -404 7292 7135 5 1080 256 289 10 20 chrX 64892544 64892643 -101757653 + GA-rich Low_complexity Low_complexity 3 100 0 5 1080 1784 264 32 11 chrX 64892691 64893127 -101757169 - Lx6 LINE L1 -275 7185 6741 5 1080 284 133 0 0 chrX 64893118 64893178 -101757118 - Lx LINE L1 -1 6653 6594 5 1080 657 325 42 24 chrX 64893557 64893938 -101756358 + Lx9 LINE L1 7234 7621 -23 5 1080 30 69 0 0 chrX 64893968 64894026 -101756270 + AT_rich Low_complexity Low_complexity 1 58 0 5 1080 1525 82 41 5 chrX 64894192 64894413 -101755883 - L1Md_F2 LINE L1 -2 6580 6352 5 1080 652 49 0 0 chrX 64894413 64894495 -101755801 + L1_Mus1 LINE L1 6257 6338 -229 5 1080 308 24 24 0 chrX 64894680 64894721 -101755575 + (TCCC)n Simple_repeat Simple_repeat 2 43 0 5 1080 789 43 43 0 chrX 64894721 64894837 -101755459 + (TTTC)n Simple_repeat Simple_repeat 1 121 0 5 1080 472 272 33 61 chrX 64895467 64895538 -101754758 + Lx9 LINE L1 6328 6391 -1253 5 1080 1104 74 0 0 chrX 64895538 64895673 -101754623 + B1_Mus1 SINE Alu 2 136 -12 5 1080 288 53 0 0 chrX 64895675 64895713 -101754583 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 5 1080 472 272 33 61 chrX 64895713 64895818 -101754478 + Lx9 LINE L1 6392 6499 -1145 5 1080 405 0 0 0 chrX 64895818 64895863 -101754433 + (T)n Simple_repeat Simple_repeat 1 45 0 5 1080 251 160 120 0 chrX 64895863 64895913 -101754383 + Lx8 LINE L1 6363 6418 -1055 5 1080 931 112 0 0 chrX 64895950 64896084 -101754212 + B1_Mm SINE Alu 2 135 -12 5 1080 186 71 0 0 chrX 64896093 64896121 -101754175 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1080 229 218 34 11 chrX 64896291 64896379 -101753917 - L1MA9 LINE L1 -25 6287 6198 5 1080 862 289 37 7 chrX 64896627 64896927 -101753369 + L1MA6 LINE L1 5525 5833 -467 5 1080 228 86 0 0 chrX 64897135 64897170 -101753126 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 1080 472 250 6 42 chrX 64897199 64897366 -101752930 - Lx2B LINE L1 0 7000 6840 5 1080 9870 129 60 59 chrX 64897366 64899207 -101751089 - RLTR22_Mur LTR ERVK -5 1843 1 5 1080 3201 148 2 39 chrX 64899256 64899622 -101750674 - L1_Mm LINE L1 -798 5085 4732 5 1080 253 0 54 0 chrX 64899622 64899659 -101750637 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1080 2264 61 0 10 chrX 64899663 64899962 -101750334 - L1Md_F2 LINE L1 -14 6568 6273 5 1080 351 0 0 0 chrX 64899963 64900002 -101750294 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1080 3201 148 2 39 chrX 64900002 64900212 -101750084 - L1_Mm LINE L1 -1152 4731 4524 5 1080 7614 107 7 5 chrX 64900189 64901730 -101748566 + L1_Mus3 LINE L1 5077 6619 -19 5 1080 429 20 0 0 chrX 64901730 64901780 -101748516 + (TAA)n Simple_repeat Simple_repeat 3 52 0 5 1080 230 135 0 0 chrX 64901780 64901817 -101748479 - Lx4B LINE L1 -154 6904 6868 5 1080 5969 178 47 6 chrX 64901785 64902955 -101747341 - Lx2B LINE L1 -196 6804 5587 5 1080 1450 158 14 17 chrX 64902973 64903269 -101747027 - L1_Mur3 LINE L1 -4067 1813 1519 5 1080 989 223 13 0 chrX 64903263 64903487 -101746809 - L1_Mur3 LINE L1 -6659 1069 843 5 1080 21 57 0 0 chrX 64904018 64904053 -101746243 + AT_rich Low_complexity Low_complexity 1 35 0 5 1080 3374 212 81 22 chrX 64904186 64905583 -101744713 + Lx7 LINE L1 4906 6386 -1310 5 1080 1820 202 25 35 chrX 64907547 64907942 -101742354 + Lx7 LINE L1 6660 7050 0 5 1080 2665 44 0 0 chrX 64908046 64908386 -101741910 - L1_Mm LINE L1 -2615 3268 2929 5 1080 254 247 82 0 chrX 64908397 64908470 -101741826 + L2 LINE L2 2357 2435 -984 5 1080 296 125 91 0 chrX 64908632 64908720 -101741576 + (TATAA)n Simple_repeat Simple_repeat 2 97 0 5 1080 340 127 14 100 chrX 64909370 64909440 -101740856 - HAL1-3A_ME LINE L1 -819 2039 1976 5 1080 204 268 0 0 chrX 64909440 64909481 -101740815 + (CG)n Simple_repeat Simple_repeat 2 42 0 5 1080 346 245 48 20 chrX 64910660 64910806 -101739490 + L1MD2 LINE L1 6197 6346 -13 5 1080 258 32 0 0 chrX 64911326 64911357 -101738939 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 1080 378 0 0 0 chrX 64911357 64911398 -101738898 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1080 280 321 7 42 chrX 64911594 64911737 -101738559 - L1_Mur3 LINE L1 -239 5641 5504 5 1080 390 115 0 0 chrX 64911873 64911934 -101738362 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 1080 216 0 0 0 chrX 64911934 64911957 -101738339 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 1080 1290 327 46 12 chrX 64911990 64912470 -101737826 + Lx8 LINE L1 6221 6716 -757 5 1080 1148 48 7 7 chrX 64912472 64912619 -101737677 + B1_Mus2 SINE Alu 1 147 0 5 1080 240 59 0 0 chrX 64912619 64912653 -101737643 + (CAA)n Simple_repeat Simple_repeat 3 36 0 5 1080 180 0 0 0 chrX 64912805 64912825 -101737471 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 5 1080 189 0 0 0 chrX 64912937 64912958 -101737338 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 5 1080 7221 69 29 1 chrX 64913482 64914472 -101735824 - L1Md_F2 LINE L1 -1704 4179 3162 5 1080 10676 68 4 7 chrX 64914460 64915886 -101734410 + L1Md_F2 LINE L1 4168 5589 -294 5 1080 7847 52 3 0 chrX 64915889 64916864 -101733432 + L1Md_F2 LINE L1 5593 6570 -12 5 1080 246 327 36 18 chrX 64917055 64917167 -101733129 + Lx8 LINE L1 6827 6940 -533 5 1080 339 361 127 7 chrX 64917257 64917564 -101732732 + Lx8 LINE L1 7091 7434 -39 5 1080 23 33 0 0 chrX 64917895 64917925 -101732371 + AT_rich Low_complexity Low_complexity 1 30 0 5 1080 225 0 0 0 chrX 64918106 64918131 -101732165 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1080 21 0 0 0 chrX 64918276 64918297 -101731999 + AT_rich Low_complexity Low_complexity 1 21 0 5 1080 462 261 16 57 chrX 64918564 64918686 -101731610 - B3 SINE B2 -5 211 95 5 1080 674 147 56 44 chrX 64918940 64919133 -101731163 + L1_Mur1 LINE L1 4464 4666 -1220 5 1080 201 114 45 0 chrX 64919133 64919177 -101731119 + T-rich Low_complexity Low_complexity 6 51 0 5 1080 5830 61 4 1 chrX 64919217 64919956 -101730340 - L1_Mus1 LINE L1 0 6567 5827 5 1080 1834 27 14 0 chrX 64919956 64920177 -101730119 + L1_Mus1 LINE L1 5610 5833 -734 5 1080 1361 103 5 10 chrX 64920157 64920353 -101729943 - L1_Mus2 LINE L1 -329 6237 6043 5 1080 7756 100 21 7 chrX 64920356 64921487 -101728809 + L1_Mur1 LINE L1 4654 5800 -86 5 1080 225 318 45 0 chrX 64921513 64921579 -101728717 - ID4_ SINE ID -11 72 4 5 1080 31 44 0 0 chrX 64921665 64921710 -101728586 + AT_rich Low_complexity Low_complexity 1 45 0 5 1080 775 235 36 0 chrX 64921843 64922064 -101728232 - Lx9 LINE L1 -7 7637 7409 5 1080 844 222 6 0 chrX 64922067 64922234 -101728062 + Lx9 LINE L1 7227 7394 -250 5 1080 491 233 0 8 chrX 64923033 64923163 -101727133 + (TA)n Simple_repeat Simple_repeat 1 129 0 5 1080 1011 114 0 0 chrX 64923703 64923843 -101726453 + B1_Mus1 SINE Alu 3 142 -6 5 1080 268 415 0 24 chrX 64924195 64924321 -101725975 - RSINE1 SINE B4 -36 129 7 5 1080 27 0 0 0 chrX 64924569 64924596 -101725700 + AT_rich Low_complexity Low_complexity 1 27 0 6 1080 27 0 0 0 chrX 64924968 64924995 -101725301 + AT_rich Low_complexity Low_complexity 1 27 0 6 1080 37355 18 4 7 chrX 64925182 64930532 -101719764 + L1Md_A LINE L1 259 5586 -297 6 1080 8827 13 0 0 chrX 64930532 64931528 -101718768 + L1Md_A LINE L1 5587 6582 0 6 1080 1357 193 87 33 chrX 64931660 64931992 -101718304 - Lx5 LINE L1 -549 6501 6152 6 1080 216 312 8 16 chrX 64931992 64932119 -101718177 + (TA)n Simple_repeat Simple_repeat 2 127 0 6 1080 288 0 0 0 chrX 64933857 64933889 -101716407 + (TA)n Simple_repeat Simple_repeat 1 32 0 6 1080 404 200 0 0 chrX 64933948 64934018 -101716278 + RSINE1 SINE B4 60 129 -36 6 1080 2518 96 60 13 chrX 64934049 64934431 -101715865 + MTB LTR MaLR 1 400 0 6 1080 253 276 25 38 chrX 64934868 64935026 -101715270 + L1M1 LINE L1 5738 5893 -407 6 1080 3021 173 30 41 chrX 64936639 64937503 -101712793 + L1_Mur2 LINE L1 603 1455 -4422 6 1080 5442 231 22 18 chrX 64937510 64939092 -101711204 + Lx5 LINE L1 5424 7021 -29 6 1080 228 231 68 77 chrX 64940306 64940423 -101709873 + RLTR20B2 LTR ERVK 93 208 -352 6 1080 379 209 0 42 chrX 64940844 64940964 -101709332 + Lx6 LINE L1 7342 7456 -4 6 1080 208 143 59 39 chrX 64941011 64941062 -101709234 + (TATG)n Simple_repeat Simple_repeat 3 54 0 6 1080 312 172 0 0 chrX 64941109 64941167 -101709129 + (TA)n Simple_repeat Simple_repeat 1 58 0 6 1080 226 211 83 14 chrX 64941170 64941242 -101709054 - L1MC4a LINE L1 -1205 6677 6601 6 1080 426 270 0 0 chrX 64941550 64941665 -101708631 + PB1D9 SINE Alu 2 116 -4 6 1080 1121 82 0 0 chrX 64942307 64942454 -101707842 - B1_Mus1 SINE Alu 0 148 2 6 1080 250 318 68 0 chrX 64942713 64942845 -101707451 + L2 LINE L2 790 930 -2489 6 1080 23 0 0 0 chrX 64944317 64944340 -101705956 + AT_rich Low_complexity Low_complexity 1 23 0 6 1080 838 122 0 48 chrX 64944340 64944529 -101705767 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 1080 357 24 0 0 chrX 64944838 64944880 -101705416 + (TAAAA)n Simple_repeat Simple_repeat 2 43 0 6 1080 396 0 0 0 chrX 64945852 64945896 -101704400 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 6 1080 209 195 0 0 chrX 64946241 64946282 -101704014 + CT-rich Low_complexity Low_complexity 1 41 0 6 1080 209 195 0 0 chrX 64949327 64949368 -101700928 + GA-rich Low_complexity Low_complexity 1 41 0 6 1080 396 0 0 0 chrX 64949713 64949757 -101700539 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 6 1080 357 24 0 0 chrX 64950729 64950771 -101699525 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 6 1080 817 128 0 48 chrX 64951088 64951277 -101699019 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 1080 255 318 68 0 chrX 64952754 64952886 -101697410 - L2 LINE L2 -2489 930 790 6 1080 1133 82 0 0 chrX 64953145 64953292 -101697004 + B1_Mus1 SINE Alu 2 148 0 6 1080 431 246 9 9 chrX 64953934 64954049 -101696247 - PB1D9 SINE Alu -4 116 2 6 1080 307 224 39 26 chrX 64954357 64954435 -101695861 + L1MC4a LINE L1 6601 6679 -1203 6 1080 285 182 0 0 chrX 64954435 64954490 -101695806 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 1080 208 143 59 39 chrX 64954537 64954588 -101695708 + (CATA)n Simple_repeat Simple_repeat 3 54 0 6 1080 360 217 0 42 chrX 64954635 64954755 -101695541 - Lx6 LINE L1 -4 7456 7342 6 1080 238 231 68 77 chrX 64955176 64955293 -101695003 - RLTR20B2 LTR ERVK -352 208 93 6 1080 4985 233 22 17 chrX 64956507 64958089 -101692207 - Lx5 LINE L1 -29 7021 5424 6 1080 2810 172 30 41 chrX 64958096 64958960 -101691336 - L1_Mur2 LINE L1 -4422 1455 603 6 1080 2528 96 60 13 chrX 64961168 64961550 -101688746 - MTB LTR MaLR 0 400 1 6 1080 408 200 0 0 chrX 64961581 64961651 -101688645 - RSINE1 SINE B4 -36 129 60 6 1080 292 287 40 80 chrX 64962105 64962230 -101688066 - B3 SINE B2 -95 121 2 6 1080 943 111 14 7 chrX 64962388 64962533 -101687763 + B1_Mus1 SINE Alu 3 148 0 6 1080 23 33 0 0 chrX 64962780 64962810 -101687486 + AT_rich Low_complexity Low_complexity 1 30 0 6 1080 239 130 0 0 chrX 64962829 64962875 -101687421 - Lx LINE L1 -826 5828 5783 6 1080 267 194 0 0 chrX 64962879 64962941 -101687355 + T-rich Low_complexity Low_complexity 1 62 0 6 1080 896 153 14 0 chrX 64962941 64963085 -101687211 - B1_Mus1 SINE Alu 0 148 3 6 1080 16898 188 20 116 chrX 64963093 64964145 -101686151 - L1VL2 LINE L1 -95 5782 4728 6 1080 207 0 0 0 chrX 64964145 64964168 -101686128 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 1080 16898 188 20 116 chrX 64964168 64965403 -101684893 - L1VL2 LINE L1 -1150 4727 3477 6 1080 4685 56 2 2 chrX 64965403 64965993 -101684303 - L1Md_F3 LINE L1 0 6584 5995 6 1080 16898 188 20 116 chrX 64965993 64966713 -101683583 - L1VL2 LINE L1 -2401 3476 3300 6 1080 261 0 0 0 chrX 64966713 64966742 -101683554 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 1080 16898 189 30 100 chrX 64966742 64969909 -101680387 - L1VL2 LINE L1 -2578 3299 322 6 1080 1712 167 69 0 chrX 64970059 64970365 -101679931 - ORR1A2 LTR MaLR 0 327 1 6 1080 2777 62 14 3 chrX 64970481 64970836 -101679460 + L1_Mus1 LINE L1 6209 6567 0 6 1080 405 230 11 0 chrX 64971406 64971493 -101678803 - ID_B1 SINE B4 -3 221 134 6 1080 2233 48 22 3 chrX 64971797 64972110 -101678186 - L1Md_A LINE L1 -6147 577 259 6 1080 6188 14 0 0 chrX 64972110 64972807 -101677489 + L1Md_A LINE L1 5886 6582 0 6 1080 21 0 0 0 chrX 64972953 64972974 -101677322 + AT_rich Low_complexity Low_complexity 1 21 0 6 1080 1365 139 4 20 chrX 64972974 64973223 -101677073 - Lx3A LINE L1 -1 6980 6736 6 1080 712 178 0 14 chrX 64973224 64973372 -101676924 + L1_Mm LINE L1 4862 5007 -876 6 1080 2922 95 2 8 chrX 64975676 64976078 -101674218 + MTB LTR MaLR 1 400 0 6 1080 604 311 19 14 chrX 64976241 64976450 -101673846 - B3 SINE B2 0 216 7 6 1080 236 286 0 0 chrX 64976496 64976573 -101673723 - L1M5 LINE L1 -2682 3464 3388 6 1080 1642 334 44 23 chrX 64976805 64977669 -101672627 - Lx8 LINE L1 -334 7139 6258 6 1080 359 179 112 7 chrX 64977752 64977904 -101672392 - Lx9 LINE L1 0 7644 7477 6 1080 585 242 0 0 chrX 64977904 64978053 -101672243 + (TA)n Simple_repeat Simple_repeat 1 149 0 6 1080 1252 7 0 0 chrX 64978059 64978207 -101672089 - L1Md_F2 LINE L1 -746 5836 5689 6 1080 4594 46 0 5 chrX 64978207 64978773 -101671523 + L1Md_F2 LINE L1 6008 6570 -12 6 1080 413 254 16 8 chrX 64978773 64978790 -101671506 - L1MC LINE L1 -2164 5718 5700 6 1080 399 127 0 0 chrX 64979136 64979199 -101671097 + (TCCC)n Simple_repeat Simple_repeat 2 64 0 6 1080 305 208 111 0 chrX 64979199 64979271 -101671025 - HAL1-3A_ME LINE L1 -503 2355 2276 6 1080 243 418 34 0 chrX 64980185 64980331 -101669965 + MER117 DNA MER1_type 1 151 -46 6 1080 191 162 0 0 chrX 64980781 64980818 -101669478 - L2b LINE L2 -2 3373 3337 6 1080 224 188 0 15 chrX 64980848 64980913 -101669383 + (CATA)n Simple_repeat Simple_repeat 1 64 0 6 1080 447 354 17 0 chrX 64982253 64982431 -101667865 - Lx8 LINE L1 -143 7330 7150 6 1080 821 208 0 7 chrX 64982456 64982606 -101667690 + B1_Mur4 SINE Alu 1 149 -1 6 1080 23 0 0 0 chrX 64982732 64982755 -101667541 + AT_rich Low_complexity Low_complexity 1 23 0 6 1080 1121 72 0 0 chrX 64982895 64983034 -101667262 + B1_Mus1 SINE Alu 1 139 -9 6 1080 1200 255 41 52 chrX 64983057 64983400 -101666896 - Lx6 LINE L1 -194 7266 6928 6 1080 859 286 5 5 chrX 64984002 64984216 -101666080 - B3 SINE B2 0 216 3 6 1080 341 380 46 0 chrX 64985125 64985233 -101665063 + PB1D7 SINE Alu 1 113 -7 6 1080 296 289 51 57 chrX 64986371 64986547 -101663749 + L1_Rod LINE L1 17 191 -6981 6 1080 279 330 47 42 chrX 64986588 64986778 -101663518 + L1_Rod LINE L1 1 191 -6981 6 1080 253 310 27 33 chrX 64986888 64987038 -101663258 + L1_Rod LINE L1 14 162 -7010 6 1080 257 333 50 37 chrX 64987174 64987392 -101662904 + L1_Rod LINE L1 11 231 -6941 6 1080 306 280 69 19 chrX 64987535 64987695 -101662601 + L1_Rod LINE L1 88 255 -6917 6 1080 353 333 91 28 chrX 64988077 64988253 -101662043 + L1_Rod LINE L1 63 249 -6923 6 1080 298 312 49 55 chrX 64988993 64989156 -101661140 + L1_Rod LINE L1 17 178 -6994 6 1080 2112 142 6 0 chrX 64991050 64991375 -101658921 - ORR1A2 LTR MaLR 0 327 1 6 1080 279 286 32 90 chrX 64992452 64992640 -101657656 + L1_Rod LINE L1 19 195 -6977 6 1080 395 313 16 58 chrX 64992762 64992952 -101657344 + L1_Rod LINE L1 15 196 -6976 6 1080 3300 187 12 15 chrX 64993032 64993629 -101656667 - RLTR17 LTR ERVK 0 692 98 6 1080 297 300 36 48 chrX 64993983 64994094 -101656202 + L1_Rod LINE L1 74 181 -6991 6 1080 1598 158 116 3 chrX 64994094 64994387 -101655909 - ORR1A3 LTR MaLR 0 326 1 6 1080 297 300 36 48 chrX 64994387 64994443 -101655853 + L1_Rod LINE L1 182 239 -6933 6 1080 312 324 21 14 chrX 64995084 64995228 -101655068 + L1_Rod LINE L1 56 200 -6972 6 1080 231 326 39 39 chrX 64995385 64995567 -101654729 + L1_Rod LINE L1 58 239 -6933 6 1080 826 141 0 13 chrX 64995767 64995925 -101654371 + CT-rich Low_complexity Low_complexity 4 159 0 6 1080 319 313 23 57 chrX 64996286 64996462 -101653834 + L1_Rod LINE L1 74 243 -6929 6 1080 561 224 132 10 chrX 64996478 64996628 -101653668 - ORR1D1 LTR MaLR 0 370 210 6 1080 376 105 0 0 chrX 64996881 64996938 -101653358 + Lx9 LINE L1 7019 7075 -569 6 1080 343 14 55 55 chrX 64996938 64997011 -101653285 + (CAAAA)n Simple_repeat Simple_repeat 2 74 0 6 1080 935 298 71 3 chrX 64997011 64997361 -101652935 + Lx9 LINE L1 7081 7454 -190 6 1080 266 164 0 18 chrX 64999390 64999446 -101650850 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 1080 189 132 0 0 chrX 65000206 65000244 -101650052 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 1080 402 336 104 24 chrX 65000451 65000826 -101649470 + HAL1 LINE L1 109 513 -1994 2 1080 25 0 0 0 chrX 65001365 65001390 -101648906 + AT_rich Low_complexity Low_complexity 1 25 0 3 1080 186 143 0 0 chrX 65001445 65001480 -101648816 + (CAA)n Simple_repeat Simple_repeat 2 36 0 4 1080 1170 68 0 0 chrX 65002266 65002412 -101647884 - B1_Mm SINE Alu -1 146 1 5 1080 201 74 0 0 chrX 65002415 65002442 -101647854 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1080 402 390 33 81 chrX 65002638 65002909 -101647387 + B4A SINE B4 7 264 -28 7 1080 600 75 0 0 chrX 65002922 65003002 -101647294 + B1_Mm SINE Alu 63 142 -5 8 1080 22 56 0 0 chrX 65003028 65003064 -101647232 + AT_rich Low_complexity Low_complexity 1 36 0 9 1080 1850 117 89 10 chrX 65003257 65003560 -101646736 - ORR1A4 LTR MaLR -2 327 1 1 1080 24 0 0 0 chrX 65003623 65003647 -101646649 + AT_rich Low_complexity Low_complexity 1 24 0 1 1080 200 167 0 0 chrX 65003775 65003805 -101646491 + polypurine Low_complexity Low_complexity 1 30 0 1 1080 1081 80 0 0 chrX 65003938 65004075 -101646221 + B1_Mus2 SINE Alu 2 138 -9 1 1080 22 56 0 0 chrX 65004100 65004136 -101646160 + AT_rich Low_complexity Low_complexity 1 36 0 1 1080 567 0 0 0 chrX 65004386 65004449 -101645847 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 1080 656 298 157 29 chrX 65005049 65005501 -101644795 - RMER20A LTR ERVK 0 516 7 1 1080 21 36 0 0 chrX 65005531 65005559 -101644737 + AT_rich Low_complexity Low_complexity 1 28 0 1 1080 247 281 110 111 chrX 65006208 65006450 -101643846 + L1MD LINE L1 3702 3942 -2204 1 1080 4740 110 21 1 chrX 65006450 65007151 -101643145 + L1_Mus4 LINE L1 5914 6628 -8 1 1080 247 281 110 111 chrX 65007151 65007646 -101642650 + L1MD LINE L1 3943 4438 -1708 1 1080 28 0 0 0 chrX 65007790 65007818 -101642478 + AT_rich Low_complexity Low_complexity 1 28 0 2 1080 9535 133 17 6 chrX 65007883 65008194 -101642102 + Lx4A LINE L1 4310 4637 -1240 2 1080 204 40 0 0 chrX 65008194 65008219 -101642077 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 1080 9535 133 17 6 chrX 65008219 65008309 -101641987 + Lx4A LINE L1 4638 4727 -1150 2 1080 495 0 0 0 chrX 65008309 65008364 -101641932 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 2 1080 9535 142 29 6 chrX 65008364 65010633 -101639663 + Lx4A LINE L1 4728 7052 -6 2 1080 2150 165 8 0 chrX 65010713 65011064 -101639232 + Lx5 LINE L1 6235 6588 -462 2 1080 782 251 0 0 chrX 65011065 65011240 -101639056 + Lx5 LINE L1 6744 6918 -132 2 1080 26 0 0 0 chrX 65011249 65011275 -101639021 + AT_rich Low_complexity Low_complexity 1 26 0 2 1081 359 278 10 0 chrX 65011909 65012006 -101638290 - PB1D9 SINE Alu -18 102 5 2 1081 867 266 80 22 chrX 65012371 65012682 -101637614 - Tigger7 DNA MER2_type -3 2488 2160 2 1081 1260 228 86 55 chrX 65012757 65013401 -101636895 - RMER6C LTR ERVK 0 720 206 2 1081 1959 144 18 26 chrX 65013401 65013765 -101636531 - ORR1A4 LTR MaLR -7 387 1 2 1081 459 205 26 13 chrX 65013765 65013875 -101636421 - RMER6C LTR ERVK -543 147 1 2 1081 475 327 12 19 chrX 65013951 65014113 -101636183 - ORR1E LTR MaLR -164 195 35 3 1081 2430 296 50 20 chrX 65014194 65014967 -101635329 + L1_Mur3 LINE L1 61 636 -7092 3 1081 5336 135 71 2 chrX 65014967 65015863 -101634433 - RMER17B LTR ERVK 0 958 1 3 1081 2430 299 83 34 chrX 65015863 65016051 -101634245 + L1_Mur3 LINE L1 416 625 -7103 3 1081 180 0 0 0 chrX 65016051 65016071 -101634225 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 1081 11845 229 65 107 chrX 65016071 65017751 -101632545 + L1_Mur3 LINE L1 626 2056 -3824 3 1081 606 28 0 0 chrX 65017751 65017823 -101632473 + (TC)n Simple_repeat Simple_repeat 1 72 0 3 1081 11845 195 57 142 chrX 65017823 65017911 -101632385 + L1_Mur3 LINE L1 2057 2068 -3812 3 1081 432 0 0 0 chrX 65017911 65017959 -101632337 + (GA)n Simple_repeat Simple_repeat 2 49 0 3 1081 11845 195 57 142 chrX 65017959 65018080 -101632216 + L1_Mur3 LINE L1 2069 2169 -3711 3 1081 2096 140 14 11 chrX 65018080 65018441 -101631855 + Lx3C LINE L1 6608 6969 -7 3 1081 11845 195 57 142 chrX 65018441 65018820 -101631476 + L1_Mur3 LINE L1 2170 2658 -3222 3 1081 473 0 18 0 chrX 65018820 65018877 -101631419 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 1081 11845 195 57 142 chrX 65018877 65019619 -101630677 + L1_Mur3 LINE L1 2659 3383 -2497 3 1081 2053 138 0 55 chrX 65019619 65019965 -101630331 + ORR1A4 LTR MaLR 1 327 -2 3 1081 11845 195 57 142 chrX 65019965 65020749 -101629547 + L1_Mur3 LINE L1 3384 4197 -1683 3 1081 387 0 0 0 chrX 65020749 65020792 -101629504 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1081 11845 195 57 142 chrX 65020792 65021304 -101628992 + L1_Mur3 LINE L1 4198 4725 -1155 3 1081 279 0 0 0 chrX 65021304 65021335 -101628961 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1081 11845 195 57 142 chrX 65021335 65021606 -101628690 + L1_Mur3 LINE L1 4726 4998 -882 3 1081 738 103 0 58 chrX 65021606 65021761 -101628535 + RMER17B LTR ERVK 318 463 -495 4 1081 11845 195 57 142 chrX 65021761 65022055 -101628241 + L1_Mur3 LINE L1 4999 5296 -584 3 1081 681 122 101 34 chrX 65022046 65022165 -101628131 + Lx3B LINE L1 6586 6712 -261 4 1081 12810 56 6 1 chrX 65024176 65026509 -101623787 - L1Md_F2 LINE L1 -2 6580 4239 4 1081 207 0 0 0 chrX 65027599 65027622 -101622674 + (TTTTA)n Simple_repeat Simple_repeat 1 23 0 4 1081 21 57 0 0 chrX 65029312 65029347 -101620949 + AT_rich Low_complexity Low_complexity 1 35 0 4 1081 269 278 0 0 chrX 65029506 65029578 -101620718 + L1MA10 LINE L1 6195 6266 -68 4 1081 3205 43 5 5 chrX 65029987 65030383 -101619913 + MTA_Mm LTR MaLR 1 396 0 4 1081 552 30 0 0 chrX 65030419 65030485 -101619811 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 1081 8090 148 24 26 chrX 65030798 65033164 -101617132 + Lx LINE L1 4296 6646 -8 4 1081 180 111 0 0 chrX 65034028 65034055 -101616241 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1081 1119 58 0 0 chrX 65034343 65034480 -101615816 + B1_Mm SINE Alu 1 137 -10 5 1081 4088 70 7 7 chrX 65034880 65035431 -101614865 + L1_Mus3 LINE L1 6081 6631 -7 5 1081 213 303 25 0 chrX 65035728 65035811 -101614485 - L2b LINE L2 -223 3164 3075 5 1081 1236 151 73 0 chrX 65035848 65036067 -101614229 + Lx2 LINE L1 6153 6387 -610 5 1081 417 168 234 0 chrX 65036065 65036202 -101614094 + Lx2 LINE L1 6832 7000 0 5 1081 4719 133 42 5 chrX 65036203 65037459 -101612837 + Lx3C LINE L1 5095 6389 -587 5 1081 3838 14 0 0 chrX 65037477 65037918 -101612378 + L1Md_T LINE L1 5146 5586 -297 5 1081 8409 35 0 0 chrX 65037918 65038914 -101611382 + L1Md_T LINE L1 5587 6582 0 5 1081 3508 124 25 87 chrX 65038907 65039341 -101610955 + Lx3C LINE L1 6373 6805 -171 5 1081 1219 21 0 0 chrX 65039341 65039482 -101610814 + B1_Mm SINE Alu 1 141 -6 5 1081 3508 124 25 87 chrX 65039482 65039690 -101610606 + Lx3C LINE L1 6806 6975 -1 5 1081 287 371 20 60 chrX 65040322 65040471 -101609825 + LTR16A LTR ERVL 6 148 -303 5 1081 423 0 0 0 chrX 65040521 65040568 -101609728 + (CATA)n Simple_repeat Simple_repeat 2 48 0 5 1081 1818 348 49 24 chrX 65040572 65041540 -101608756 + Lx8 LINE L1 6269 7260 -213 6 1081 309 343 46 73 chrX 65041752 65042013 -101608283 + LTR16A LTR ERVL 172 425 -26 5 1081 27 49 0 0 chrX 65042031 65042072 -101608224 + AT_rich Low_complexity Low_complexity 1 41 0 6 1081 693 184 257 0 chrX 65042335 65042514 -101607782 - URR1B DNA MER1_type 0 225 1 6 1081 1006 48 0 16 chrX 65042622 65042748 -101607548 - L1_Mus2 LINE L1 -127 6440 6317 6 1081 350 87 5 0 chrX 65042747 65042815 -101607481 + L1_Mus2 LINE L1 6510 6582 0 6 1081 1542 94 54 0 chrX 65042844 65043067 -101607229 - Lx2 LINE L1 -1093 5904 5670 6 1081 9571 83 50 0 chrX 65043062 65043304 -101606992 - L1_Mus3 LINE L1 -698 5940 5692 6 1081 4264 112 8 0 chrX 65043304 65043927 -101606369 + L1_Mus3 LINE L1 6009 6636 -2 6 1081 9571 174 49 19 chrX 65043927 65044164 -101606132 - L1_Mus3 LINE L1 -186 5691 5445 6 1081 249 57 0 0 chrX 65044164 65044199 -101606097 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1081 9571 174 49 19 chrX 65044199 65044808 -101605488 - L1_Mus3 LINE L1 -433 5444 4789 6 1081 1160 98 0 6 chrX 65044808 65044982 -101605314 + (TCTCC)n Simple_repeat Simple_repeat 3 175 0 6 1081 9571 174 49 19 chrX 65044982 65045230 -101605066 - L1_Mus3 LINE L1 -1089 4788 4529 6 1081 3895 120 24 2 chrX 65045230 65045821 -101604475 - L1_Mus3 LINE L1 -6 6632 6029 6 1081 9571 174 49 19 chrX 65045821 65046474 -101603822 - L1_Mus3 LINE L1 -1349 4528 3887 6 1081 4653 153 49 8 chrX 65046474 65047293 -101603003 + Lx2 LINE L1 6144 6995 -2 6 1081 414 296 76 84 chrX 65047847 65048726 -101601570 - L1M3a LINE L1 -2853 3287 2416 7 1081 267 284 23 0 chrX 65048797 65048885 -101601411 - L1MA6 LINE L1 -50 6250 6161 7 1081 1756 245 167 21 chrX 65049148 65049802 -101600494 + Lx5 LINE L1 591 1339 -5747 7 1081 636 213 0 0 chrX 65049795 65049922 -101600374 + Lx5 LINE L1 4729 4855 -1022 7 1081 644 49 0 0 chrX 65049926 65050008 -101600288 + B1_Mur4 SINE Alu 67 148 -2 7 1081 330 184 6 6 chrX 65050008 65050085 -101600211 + Lx5 LINE L1 4836 4921 -965 7 1081 3479 153 9 16 chrX 65050089 65050795 -101599501 + Lx5 LINE L1 5254 5966 -1084 7 1081 23 33 0 0 chrX 65050941 65050971 -101599325 + AT_rich Low_complexity Low_complexity 1 30 0 7 1081 350 419 46 33 chrX 65051417 65051812 -101598484 - L1M3a LINE L1 -5493 574 175 7 1081 25 31 0 0 chrX 65052208 65052240 -101598056 + AT_rich Low_complexity Low_complexity 1 32 0 7 1081 450 53 0 0 chrX 65052419 65052476 -101597820 + (TA)n Simple_repeat Simple_repeat 2 58 0 7 1081 863 118 96 0 chrX 65052482 65052617 -101597679 - B1_Mus1 SINE Alu 0 148 1 7 1081 422 381 23 0 chrX 65052709 65052885 -101597411 - MLT1D LTR MaLR -310 195 16 7 1081 304 338 62 58 chrX 65052892 65053168 -101597128 + L1M5 LINE L1 3453 3729 -2417 7 1081 263 259 0 0 chrX 65053225 65053311 -101596985 + L1M5 LINE L1 3801 3886 -2260 7 1081 2628 218 23 16 chrX 65053516 65054079 -101596217 + Lx6 LINE L1 6182 6748 -712 8 1081 405 110 0 0 chrX 65054092 65054165 -101596131 + (GA)n Simple_repeat Simple_repeat 2 74 0 8 1081 720 181 6 80 chrX 65054166 65054328 -101595968 + Lx6 LINE L1 6744 6893 -567 8 1081 369 0 0 0 chrX 65054332 65054373 -101595923 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 1081 1481 263 14 103 chrX 65054401 65054905 -101595391 + Lx6 LINE L1 6854 7312 -148 8 1081 10128 174 9 58 chrX 65054946 65056831 -101593465 - L1_Mur2 LINE L1 -187 5690 3908 8 1081 1187 48 7 0 chrX 65056831 65056977 -101593319 - B1_Mus1 SINE Alu 0 148 2 8 1081 8228 165 11 69 chrX 65056977 65057282 -101593014 - L1_Mur2 LINE L1 -1970 3907 3609 8 1081 534 211 37 15 chrX 65057282 65057417 -101592879 + Lx6 LINE L1 7307 7444 -16 8 1081 21 0 0 0 chrX 65057479 65057500 -101592796 + AT_rich Low_complexity Low_complexity 1 21 0 8 1081 1821 183 16 14 chrX 65057660 65058031 -101592265 + Lx4A LINE L1 5760 6131 -927 8 1081 3158 190 50 24 chrX 65058019 65058676 -101591620 + Lx4A LINE L1 6381 7054 -4 8 1081 22 0 0 0 chrX 65058740 65058762 -101591534 + AT_rich Low_complexity Low_complexity 1 22 0 8 1081 779 251 48 70 chrX 65058814 65059170 -101591126 + Lx7 LINE L1 7281 7628 -68 8 1081 338 102 34 0 chrX 65059687 65059746 -101590550 + (TTTTC)n Simple_repeat Simple_repeat 5 65 0 9 1081 4763 231 33 22 chrX 65060862 65061552 -101588744 + Lx9 LINE L1 6409 7120 -524 9 1081 882 31 31 8 chrX 65061552 65061680 -101588616 + L1Md_A LINE L1 6450 6580 -2 9 1081 4763 231 33 22 chrX 65061680 65062208 -101588088 + Lx9 LINE L1 7121 7640 -4 9 1081 2173 222 49 22 chrX 65062816 65063714 -101586582 + L1_Mur2 LINE L1 892 1749 -4131 9 1081 5161 130 62 7 chrX 65063718 65064619 -101585677 - Lx4A LINE L1 -472 5405 4455 9 1081 7867 167 28 9 chrX 65064614 65066230 -101584066 + Lx4A LINE L1 5412 7056 -2 9 1081 451 248 173 68 chrX 65066255 65066562 -101583734 + L1_Mur2 LINE L1 1730 2068 -3812 9 1081 2394 228 83 6 chrX 65066562 65067198 -101583098 + L1_Mur2 LINE L1 4923 5607 -270 9 1081 401 267 0 29 chrX 65067189 65067328 -101582968 + Lx6 LINE L1 7300 7434 -26 9 1081 558 0 0 0 chrX 65067332 65067394 -101582902 + (GA)n Simple_repeat Simple_repeat 1 62 0 9 1081 25 51 0 0 chrX 65067976 65068015 -101582281 + AT_rich Low_complexity Low_complexity 1 39 0 9 1081 3149 63 5 0 chrX 65068076 65068470 -101581826 - MTA_Mm LTR MaLR 0 396 1 9 1081 4890 67 5 3 chrX 65068470 65069129 -101581167 - MTA_Mm-int LTR MaLR 0 1098 439 9 1081 290 359 0 0 chrX 65069147 65069239 -101581057 - PB1D7 SINE Alu -6 114 23 1 1081 182 37 0 36 chrX 65069260 65069288 -101581008 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1 1081 5620 128 17 13 chrX 65069288 65070215 -101580081 - Lx3A LINE L1 -27 6954 6024 1 1081 1305 83 0 0 chrX 65070215 65070395 -101579901 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1 1081 894 122 0 0 chrX 65070395 65070534 -101579762 + (TCC)n Simple_repeat Simple_repeat 1 139 0 1 1081 1107 134 0 0 chrX 65070534 65070713 -101579583 + (TTC)n Simple_repeat Simple_repeat 1 179 0 1 1081 8204 153 60 23 chrX 65070713 65071739 -101578557 - L1Md_F2 LINE L1 -114 6886 5793 1 1081 3457 57 0 2 chrX 65071739 65072176 -101578120 - L1Md_F2 LINE L1 -12 6570 6135 1 1081 8204 106 38 18 chrX 65072176 65073376 -101576920 - L1Md_F2 LINE L1 -88 5798 4560 1 1081 562 311 79 30 chrX 65073417 65073619 -101576677 - B3 SINE B2 -4 212 1 1 1081 354 23 0 0 chrX 65074330 65074373 -101575923 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1081 222 333 11 0 chrX 65074861 65074948 -101575348 + (TATATG)n Simple_repeat Simple_repeat 3 90 0 1 1081 540 357 43 14 chrX 65074963 65075042 -101575254 - B4 SINE B4 0 292 211 1 1081 279 0 0 0 chrX 65075042 65075073 -101575223 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 1081 540 357 43 14 chrX 65075073 65075274 -101575022 - B4 SINE B4 -82 210 5 1 1081 200 309 108 49 chrX 65075478 65075580 -101574716 - L2a LINE L2 -36 3390 3283 1 1081 2270 234 90 53 chrX 65075834 65076571 -101573725 + Lx7 LINE L1 6931 7694 -2 1 1081 329 325 46 74 chrX 65076959 65077175 -101573121 - L1MEc LINE L1 -5516 884 675 1 1081 23 33 0 0 chrX 65077207 65077237 -101573059 + AT_rich Low_complexity Low_complexity 1 30 0 1 1081 1045 132 0 0 chrX 65077619 65077770 -101572526 - Lx4A LINE L1 -551 6507 6357 1 1081 1612 90 69 3 chrX 65077743 65078000 -101572296 - L1_Mus1 LINE L1 -1174 5876 5612 1 1081 1444 50 65 0 chrX 65078023 65078222 -101572074 - Lx LINE L1 -856 5798 5587 1 1081 581 136 0 0 chrX 65078478 65078566 -101571730 + Lx4A LINE L1 6691 6778 -280 1 1081 198 204 0 75 chrX 65079250 65079303 -101570993 + L2b LINE L2 3097 3145 -230 1 1081 7134 121 22 3 chrX 65079585 65080908 -101569388 + Lx LINE L1 5316 6647 -7 1 1081 1089 95 0 0 chrX 65081076 65081223 -101569073 - B1_Mus1 SINE Alu 0 148 2 1 1081 1953 133 19 16 chrX 65081417 65081729 -101568567 - Lx3A LINE L1 -2 6979 6667 1 1081 21 0 0 0 chrX 65081831 65081852 -101568444 + AT_rich Low_complexity Low_complexity 1 21 0 1 1081 408 286 53 8 chrX 65082040 65082287 -101568009 + L1MA6 LINE L1 6039 6296 -4 1 1081 4038 60 0 10 chrX 65082488 65083009 -101567287 - L1Md_F2 LINE L1 -2 6580 6065 1 1081 22 0 0 0 chrX 65084554 65084576 -101565720 + AT_rich Low_complexity Low_complexity 1 22 0 1 1081 450 180 113 7 chrX 65086083 65086234 -101564062 + L1_Mur2 LINE L1 1021 1187 -5899 1 1081 235 184 20 0 chrX 65086234 65086283 -101564013 + B4 SINE B4 2 51 -241 1 1081 2894 134 8 41 chrX 65086287 65086800 -101563496 + Lx2 LINE L1 5849 6344 -653 1 1081 832 110 29 7 chrX 65086798 65086929 -101563367 + L1_Mus2 LINE L1 6427 6561 -5 1 1081 4083 131 15 5 chrX 65086929 65087580 -101562716 + Lx2 LINE L1 6340 6997 0 1 1081 4083 181 48 50 chrX 65087583 65088440 -101561856 + L1_Mur2 LINE L1 1174 2052 -3825 1 1081 321 26 0 0 chrX 65088440 65088478 -101561818 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1081 4083 192 50 33 chrX 65088478 65088547 -101561749 + L1_Mur2 LINE L1 2053 2124 -3753 1 1081 2659 73 3 6 chrX 65088547 65088893 -101561403 - IAPLTR4 LTR ERVK 0 345 1 1 1081 4083 192 50 33 chrX 65088893 65089063 -101561233 + L1_Mur2 LINE L1 2125 2289 -3588 1 1081 6918 161 142 23 chrX 65089058 65090540 -101559756 + L1_Mur2 LINE L1 3882 5540 -337 1 1081 2157 182 84 15 chrX 65090543 65091006 -101559290 + Lx4B LINE L1 6564 7058 0 1 1081 265 252 56 93 chrX 65091134 65091296 -101559000 + Charlie7 DNA MER1_type 344 499 -2113 1 1081 480 296 150 51 chrX 65091932 65092185 -101558111 + MER2 DNA MER2_type 25 302 -43 1 1081 22 0 0 0 chrX 65093642 65093664 -101556632 + AT_rich Low_complexity Low_complexity 1 22 0 1 1081 22 0 0 0 chrX 65094199 65094221 -101556075 + AT_rich Low_complexity Low_complexity 1 22 0 1 1081 483 18 0 0 chrX 65094802 65094858 -101555438 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1081 8426 110 22 6 chrX 65095086 65096380 -101553916 + Lx3_Mus LINE L1 5715 7007 -2 1 1081 4517 158 5 13 chrX 65097569 65098347 -101551949 - Lx LINE L1 0 6654 5883 1 1081 36 77 0 0 chrX 65099418 65099496 -101550800 + AT_rich Low_complexity Low_complexity 1 78 0 1 1081 729 221 7 0 chrX 65103266 65103411 -101546885 - B1_Mus1 SINE Alu 0 148 3 1 1081 320 379 64 26 chrX 65103549 65103782 -101546514 - MLT1-int LTR MaLR -188 1183 942 1 1081 588 330 114 20 chrX 65104058 65104408 -101545888 - MLT1-int LTR MaLR -639 732 350 1 1081 2079 234 38 7 chrX 65104505 65104956 -101545340 - Lx5 LINE L1 -8 7042 6578 1 1081 733 330 105 48 chrX 65105071 65105530 -101544766 - MLT2B4 LTR ERVL -12 544 60 1 1081 31 76 0 0 chrX 65105988 65106054 -101544242 + AT_rich Low_complexity Low_complexity 1 66 0 1 1081 261 0 0 0 chrX 65106177 65106206 -101544090 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 1081 310 339 68 25 chrX 65106458 65106694 -101543602 - L1M5 LINE L1 -1779 4367 4122 1 1081 24 32 0 0 chrX 65106955 65106986 -101543310 + AT_rich Low_complexity Low_complexity 1 31 0 1 1081 652 313 38 21 chrX 65107015 65107253 -101543043 - Lx6 LINE L1 -26 7434 7193 1 1081 241 226 0 0 chrX 65107373 65107435 -101542861 + L1MEc LINE L1 1378 1439 -4961 1 1081 1608 337 21 16 chrX 65107723 65108335 -101541961 - Lx8 LINE L1 -218 7255 6641 1 1081 262 176 28 0 chrX 65108642 65108711 -101541585 - Lx8 LINE L1 -1556 5904 5799 1 1081 3179 191 5 3 chrX 65108951 65109576 -101540720 - L1_Mur2 LINE L1 -515 5362 4737 1 1081 6945 112 30 3 chrX 65109569 65110799 -101539497 + L1_Mus4 LINE L1 5367 6630 -6 1 1081 501 186 25 8 chrX 65111006 65111125 -101539171 - L1_Mur2 LINE L1 -2447 3430 3310 1 1081 3669 196 31 0 chrX 65111116 65111855 -101538441 + Lx5 LINE L1 4982 5743 -134 1 1081 2132 196 54 5 chrX 65111850 65112275 -101538021 + Lx5 LINE L1 6091 6536 -514 1 1081 2390 78 0 0 chrX 65112391 65112699 -101537597 - L1Md_F2 LINE L1 -255 6327 6020 1 1081 1094 66 36 6 chrX 65112700 65112867 -101537429 + L1Md_F2 LINE L1 6399 6570 -12 1 1081 897 326 29 44 chrX 65112929 65113314 -101536982 + MTE2b LTR MaLR 1 379 0 1 1081 23 0 0 0 chrX 65113443 65113466 -101536830 + AT_rich Low_complexity Low_complexity 1 23 0 1 1081 290 274 14 14 chrX 65113518 65113592 -101536704 + B4A SINE B4 31 104 -188 1 1081 246 42 41 20 chrX 65113593 65113642 -101536654 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 1 1081 186 43 0 0 chrX 65113675 65113698 -101536598 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 1 1081 955 189 52 70 chrX 65113698 65114043 -101536253 + RLTRETN_Mm LTR ERVK 15 409 0 1 1081 249 303 32 43 chrX 65114145 65114238 -101536058 + B3 SINE B2 112 203 -13 1 1081 524 24 11 56 chrX 65114366 65114455 -101535841 + (TATAA)n Simple_repeat Simple_repeat 3 87 0 1 1081 44 0 0 0 chrX 65114691 65114735 -101535561 + AT_rich Low_complexity Low_complexity 1 44 0 1 1081 315 350 90 51 chrX 65114737 65115225 -101535071 - L1MEc LINE L1 -4259 2141 1635 1 1081 360 0 0 0 chrX 65115516 65115556 -101534740 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 1081 513 0 0 0 chrX 65115556 65115612 -101534684 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1081 280 267 165 43 chrX 65116025 65116084 -101534212 + Tigger1 DNA MER2_type 2208 2271 -147 1 1081 264 122 0 0 chrX 65116084 65116125 -101534171 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1081 280 267 165 43 chrX 65116125 65116253 -101534043 + Tigger1 DNA MER2_type 2272 2417 -1 1 1081 2007 157 0 15 chrX 65116435 65116764 -101533532 + RMER6D LTR ERVK 1 324 -396 1 1081 1778 205 53 24 chrX 65116886 65117261 -101533035 - RMER6D LTR ERVK 0 720 335 1 1081 2241 178 85 13 chrX 65117306 65117778 -101532518 + RLTR19C LTR ERVK 1 506 0 1 1081 22250 88 5 18 chrX 65117993 65120537 -101529759 - L1Md_F LINE L1 -1410 4473 1971 1 1081 207 0 0 0 chrX 65120537 65120560 -101529736 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1081 22250 156 52 19 chrX 65120560 65122438 -101527858 - L1Md_F LINE L1 -3913 1970 66 1 1081 1152 217 199 6 chrX 65122440 65122797 -101527499 - RMER6C LTR ERVK -2 688 263 1 1081 333 160 213 0 chrX 65122806 65122881 -101527415 - RMER6C LTR ERVK -599 91 1 1 1081 5604 258 29 25 chrX 65123417 65124786 -101525510 - Lx6 LINE L1 -16 7444 6071 1 1081 2421 103 13 13 chrX 65124886 65125261 -101525035 + Lx LINE L1 6275 6649 -5 1 1081 718 277 58 102 chrX 65125368 65125384 -101524912 - RLTR31_Mur LTR ERVK -52 509 489 1 1081 450 0 0 0 chrX 65125384 65125434 -101524862 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1081 360 0 0 0 chrX 65125434 65125473 -101524823 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 1081 1100 257 22 74 chrX 65125473 65125947 -101524349 - RLTR31_Mur LTR ERVK -73 488 39 1 1081 514 107 0 0 chrX 65125952 65126027 -101524269 + Lx3_Mus LINE L1 5834 5908 -1101 1 1081 390 89 0 18 chrX 65126020 65126071 -101524225 - L1_Mm LINE L1 -2511 3372 3322 1 1081 1124 84 90 6 chrX 65126071 65126238 -101524058 + L1_Mus1 LINE L1 6387 6567 0 1 1081 616 111 71 0 chrX 65126377 65126476 -101523820 + Lx3_Mus LINE L1 5893 5998 -1011 1 1081 385 323 130 8 chrX 65126470 65126622 -101523674 + Lx8 LINE L1 7178 7334 -139 1 1081 459 0 0 0 chrX 65126622 65126673 -101523623 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1081 385 323 130 8 chrX 65126673 65126782 -101523514 + Lx8 LINE L1 7335 7470 -3 1 1081 7844 23 3 1 chrX 65126900 65127817 -101522479 + L1Md_F3 LINE L1 5634 6552 -32 1 1081 213 324 14 40 chrX 65128033 65128107 -101522189 - RSINE1 SINE B4 -86 79 8 1 1081 22 0 0 0 chrX 65128262 65128284 -101522012 + AT_rich Low_complexity Low_complexity 1 22 0 1 1081 1193 96 6 0 chrX 65128803 65128981 -101521315 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 1081 314 256 189 40 chrX 65129152 65129327 -101520969 + Charlie2b DNA MER1_type 465 665 -2117 1 1081 380 234 184 25 chrX 65129385 65129630 -101520666 + Charlie2a DNA MER1_type 1471 1754 -1107 1 1081 596 219 46 34 chrX 65129824 65129999 -101520297 + L1MA4 LINE L1 5656 5832 -468 1 1081 10862 107 11 4 chrX 65129996 65132370 -101517926 + L1_Mus2 LINE L1 4179 6566 0 1 1081 1123 281 92 9 chrX 65133310 65133647 -101516649 - MTD LTR MaLR -14 405 41 1 1081 1110 89 16 32 chrX 65133757 65133943 -101516353 - L1_Mus3 LINE L1 0 6638 6456 1 1081 1146 322 73 24 chrX 65134187 65134237 -101516059 - Lx8 LINE L1 -3 7470 7419 2 1081 4351 73 3 15 chrX 65134237 65134834 -101515462 - L1_Mus2 LINE L1 0 6566 5977 2 1081 1146 322 73 24 chrX 65134834 65135401 -101514895 - Lx8 LINE L1 -55 7418 6824 2 1081 818 116 0 35 chrX 65135560 65135703 -101514593 + Lx LINE L1 6513 6650 -4 2 1081 327 141 0 0 chrX 65135929 65135993 -101514303 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 1081 450 388 50 19 chrX 65136826 65137086 -101513210 - MT2A LTR ERVL -69 464 197 2 1081 230 333 80 0 chrX 65137120 65137195 -101513101 - MTEa LTR MaLR -250 129 49 2 1081 214 329 29 0 chrX 65137298 65137368 -101512928 + ID SINE ID 3 74 -150 2 1081 428 355 34 15 chrX 65138497 65138703 -101511593 + RMER15 LTR ERVL 354 563 -12 2 1081 1773 148 16 0 chrX 65139344 65139662 -101510634 - L1_Mur2 LINE L1 -1419 4458 4136 2 1081 9383 125 38 35 chrX 65139685 65141291 -101509005 - L1_Mur2 LINE L1 -2924 2953 1341 2 1081 1083 84 0 0 chrX 65141291 65141433 -101508863 - B1_Mus1 SINE Alu -5 143 2 2 1081 9383 161 24 61 chrX 65141433 65141875 -101508421 - L1_Mur2 LINE L1 -5746 1340 948 2 1081 4744 109 22 3 chrX 65141875 65142590 -101507706 - Lx3_Mus LINE L1 -12 6997 6269 2 135 4370 178 18 72 chrX 65142590 65143113 -101507183 - L1_Mur2 LINE L1 -6139 947 428 2 1082 207 189 0 0 chrX 65143846 65143899 -101506397 + T-rich Low_complexity Low_complexity 1 53 0 2 1082 1149 55 7 0 chrX 65143907 65144052 -101506244 - B1_Mus2 SINE Alu 0 147 2 2 1082 204 245 0 0 chrX 65145079 65145128 -101505168 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 1082 345 24 0 0 chrX 65145128 65145170 -101505126 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1082 269 300 57 57 chrX 65145171 65145330 -101504966 - MIR SINE MIR -30 232 74 2 1082 36482 51 9 10 chrX 65145336 65151454 -101498842 - L1Md_F2 LINE L1 -4 6578 479 2 1082 3057 189 2 20 chrX 65151662 65152224 -101498072 + Lx4B LINE L1 6191 6742 -316 2 1082 1186 250 76 35 chrX 65152825 65153432 -101496864 + L1_Mur3 LINE L1 1085 1714 -4166 2 1082 1412 290 59 10 chrX 65153449 65153941 -101496355 + Lx6 LINE L1 6945 7460 0 2 1082 256 283 152 0 chrX 65153951 65154043 -101496253 + Lx9 LINE L1 6514 6619 -1025 2 1082 503 252 90 72 chrX 65154047 65154381 -101495915 - L1_Mur3 LINE L1 -2629 3251 2912 2 1082 29688 78 42 1 chrX 65154396 65158788 -101491508 - L1Md_F2 LINE L1 -590 5994 1408 2 1082 38009 47 1 13 chrX 65158790 65164939 -101485357 - L1Md_T LINE L1 0 6582 511 2 1082 3916 136 1 24 chrX 65164938 65165765 -101484531 - L1Md_F2 LINE L1 -4451 1432 409 2 1082 2741 237 38 34 chrX 65165771 65166591 -101483705 + L1_Mur3 LINE L1 3369 4200 -1680 2 1082 1054 102 0 0 chrX 65166591 65166728 -101483568 + B1_Mus2 SINE Alu 1 137 -10 2 1082 387 0 0 0 chrX 65166728 65166771 -101483525 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 2 1082 2741 237 38 34 chrX 65166771 65166826 -101483470 + L1_Mur3 LINE L1 4201 4247 -1633 2 1082 746 144 112 0 chrX 65166828 65166953 -101483343 + B1_Mus1 SINE Alu 7 145 -3 2 1082 25 0 0 0 chrX 65166975 65167000 -101483296 + AT_rich Low_complexity Low_complexity 1 25 0 2 1082 258 252 97 39 chrX 65167000 65167103 -101483193 - PB1D10 SINE Alu -8 109 1 2 1082 296 324 31 67 chrX 65167227 65167422 -101482874 + B4 SINE B4 2 189 -103 2 1082 459 0 0 0 chrX 65167783 65167834 -101482462 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1082 2765 193 108 66 chrX 65167834 65168609 -101481687 + RLTR13C2 LTR ERVK 1 808 0 2 1082 417 20 0 0 chrX 65168609 65168659 -101481637 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1082 483 242 7 29 chrX 65168659 65168795 -101481501 + L1_Mur3 LINE L1 4637 4769 -1111 2 1082 910 99 28 0 chrX 65168805 65168947 -101481349 + MusHAL1 LINE L1 1623 1768 -944 2 1082 2456 102 89 5 chrX 65168944 65169369 -101480927 + MusHAL1 LINE L1 2252 2712 0 2 1082 8851 146 15 3 chrX 65169357 65171668 -101478628 + Lx LINE L1 4310 6646 -8 2 1082 1257 211 13 72 chrX 65171670 65171977 -101478319 - RMER12 LTR ERVK -1030 292 4 2 1082 374 282 140 50 chrX 65175216 65175258 -101475038 - ORR1E LTR MaLR -164 195 153 2 1082 2176 59 0 14 chrX 65175258 65175552 -101474744 - L1Md_F2 LINE L1 0 6582 6293 2 1082 374 282 140 50 chrX 65175552 65175688 -101474608 - ORR1E LTR MaLR -207 152 2 2 1082 3173 257 103 59 chrX 65177098 65178264 -101472032 - RMER1A Other Other -5 1025 1 2 1082 235 230 26 39 chrX 65178297 65178374 -101471922 - RMER1B Other Other -676 390 315 2 1082 326 293 140 28 chrX 65178835 65179014 -101471282 - L1MEc LINE L1 -4798 1602 1404 2 1082 294 290 117 28 chrX 65179083 65179477 -101470819 - L1MEc LINE L1 -5116 1284 856 2 1082 1067 280 119 19 chrX 65179478 65179856 -101470440 + MTD LTR MaLR 3 418 -1 2 1082 404 168 23 144 chrX 65180789 65180921 -101469375 - L1MA4A LINE L1 -348 5955 5840 2 1082 719 242 119 94 chrX 65181760 65182198 -101468098 + Lx7 LINE L1 7248 7696 0 2 1082 22 35 0 0 chrX 65182305 65182334 -101467962 + AT_rich Low_complexity Low_complexity 1 29 0 2 1082 266 324 15 0 chrX 65182900 65182968 -101467328 - ID4 SINE ID -10 73 5 2 1082 4095 91 155 0 chrX 65183708 65184322 -101465974 + L1_Mus1 LINE L1 5858 6566 -1 2 1082 3954 106 28 7 chrX 65184892 65185170 -101465126 - Lx3A LINE L1 -660 6321 6044 2 1082 411 21 0 0 chrX 65185170 65185218 -101465078 + (TCCC)n Simple_repeat Simple_repeat 1 48 0 2 1082 3954 106 28 7 chrX 65185218 65185539 -101464757 - Lx3A LINE L1 -938 6043 5710 2 1082 1507 139 129 0 chrX 65185533 65185820 -101464476 + L1_Mur2 LINE L1 4633 4956 -921 2 1082 387 256 65 15 chrX 65185949 65186149 -101464147 - L1MC LINE L1 -3134 3012 2804 2 1082 319 325 98 4 chrX 65186165 65186440 -101463856 - L1M4b LINE L1 -3488 3518 3218 2 1082 21 36 0 0 chrX 65186573 65186601 -101463695 + AT_rich Low_complexity Low_complexity 1 28 0 2 1082 413 195 114 9 chrX 65186692 65186806 -101463490 - L1M4b LINE L1 -4700 2402 2277 2 1082 3741 231 57 19 chrX 65186834 65187661 -101462635 - RMER13A LTR ERVK 0 860 3 2 1082 250 191 60 24 chrX 65187796 65187894 -101462402 - L1M4b LINE L1 -5023 2079 1904 2 1082 399 41 0 0 chrX 65187894 65187943 -101462353 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1082 233 269 176 65 chrX 65187943 65188014 -101462282 - L1M4b LINE L1 -5090 2012 1904 2 1082 249 33 0 0 chrX 65188014 65188044 -101462252 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1082 707 273 152 60 chrX 65188044 65188454 -101461842 - L1M4b LINE L1 -5199 1903 1327 2 1082 24 0 0 0 chrX 65188513 65188537 -101461759 + AT_rich Low_complexity Low_complexity 1 24 0 2 1082 1892 216 66 18 chrX 65188570 65189026 -101461270 - Lx5 LINE L1 -747 6303 5826 2 1082 691 167 14 14 chrX 65189026 65189166 -101461130 + Lx6 LINE L1 7311 7450 -10 2 1082 24 0 0 0 chrX 65189194 65189218 -101461078 + AT_rich Low_complexity Low_complexity 1 24 0 2 1082 488 70 0 0 chrX 65189425 65189496 -101460800 - L1_Mus2 LINE L1 -1 6565 6495 2 1082 24 0 0 0 chrX 65189876 65189900 -101460396 + AT_rich Low_complexity Low_complexity 1 24 0 2 1082 21 57 0 0 chrX 65190445 65190480 -101459816 + AT_rich Low_complexity Low_complexity 1 35 0 2 1082 23 0 0 0 chrX 65191151 65191174 -101459122 + AT_rich Low_complexity Low_complexity 1 23 0 2 1082 1073 319 62 10 chrX 65191199 65191586 -101458710 - MTC LTR MaLR -14 407 1 2 1082 554 327 0 0 chrX 65191690 65191849 -101458447 - RSINE1 SINE B4 0 165 7 2 1082 28781 113 16 14 chrX 65191900 65193502 -101456794 + L1Md_F LINE L1 389 1981 -3902 2 1082 207 0 0 0 chrX 65193502 65193525 -101456771 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1082 28781 97 18 7 chrX 65193525 65196734 -101453562 + L1Md_F LINE L1 1982 5234 -649 2 1082 531 0 0 0 chrX 65196734 65196793 -101453503 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 1082 28781 97 18 7 chrX 65196793 65197137 -101453159 + L1Md_F LINE L1 5235 5585 -298 2 1082 7476 72 2 8 chrX 65197137 65198127 -101452169 + L1Md_F2 LINE L1 5587 6570 -12 2 1082 28781 97 18 7 chrX 65198127 65198138 -101452158 + L1Md_F LINE L1 5586 5598 -285 2 1082 668 236 35 9 chrX 65198491 65198722 -101451574 + L1M3 LINE L1 2630 2866 -3274 2 1082 460 362 17 80 chrX 65198724 65198930 -101451366 + B3 SINE B2 2 191 -7 2 1082 21 57 0 0 chrX 65198936 65198971 -101451325 + AT_rich Low_complexity Low_complexity 1 35 0 2 1082 22 56 0 0 chrX 65199475 65199511 -101450785 + AT_rich Low_complexity Low_complexity 1 36 0 2 1082 292 330 58 10 chrX 65199587 65199691 -101450605 + MTEa LTR MaLR 258 366 -13 2 1082 465 330 0 0 chrX 65199730 65199930 -101450366 + L1M2 LINE L1 5596 5795 -496 2 1082 5217 63 1 5 chrX 65200278 65200945 -101449351 - L1Md_F2 LINE L1 -14 6568 5904 2 1082 31 44 0 0 chrX 65200980 65201025 -101449271 + AT_rich Low_complexity Low_complexity 1 45 0 2 1082 1273 328 90 37 chrX 65201261 65201694 -101448602 - Lx8 LINE L1 -189 7284 6750 2 1082 2179 142 34 39 chrX 65201694 65202105 -101448191 - RLTR9E LTR ERVK 0 409 1 2 1082 1273 321 50 49 chrX 65202105 65202389 -101447907 - Lx8 LINE L1 -724 6749 6468 2 1082 186 43 0 0 chrX 65202486 65202509 -101447787 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 1082 471 48 0 0 chrX 65211299 65211361 -101438935 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 1082 471 48 0 0 chrX 65213594 65213656 -101436640 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 1082 546 54 0 0 chrX 65215889 65215963 -101434333 + (TG)n Simple_repeat Simple_repeat 1 74 0 2 1082 2225 178 152 5 chrX 65217739 65218185 -101432111 - RMER15 LTR ERVL -2 573 62 2 1082 998 247 88 4 chrX 65218187 65218447 -101431849 - RMER15-int LTR ERVL -2138 2861 2580 2 1082 5354 135 12 5 chrX 65219240 65220079 -101430217 - Lx2A1 LINE L1 -2 7006 6162 2 1082 1612 138 0 0 chrX 65220083 65220337 -101429959 + Lx2A1 LINE L1 5878 6131 -877 2 1082 383 286 56 14 chrX 65222040 65222182 -101428114 - MuRRS4-int LTR ERV1 -1370 3693 3546 2 1082 707 168 8 0 chrX 65224297 65224416 -101425880 - Lx4B LINE L1 -297 6761 6642 2 1082 1501 175 164 6 chrX 65224987 65225304 -101424992 + ORR1B2 LTR MaLR 1 367 0 2 1082 2504 244 59 175 chrX 65225922 65226514 -101423782 - Lx2B LINE L1 -7 7002 6402 2 1082 1124 75 0 0 chrX 65226514 65226660 -101423636 - B1_Mus1 SINE Alu 0 148 3 2 1082 3369 189 42 50 chrX 65226660 65227535 -101422761 - Lx2B LINE L1 -608 6401 5705 2 1082 333 318 20 20 chrX 65227535 65227686 -101422610 - RMER15-int LTR ERVL -4097 902 752 2 1082 1582 273 124 32 chrX 65227668 65228224 -101422072 - RMER15-int LTR ERVL -4368 631 25 2 1082 1795 232 8 3 chrX 65228236 65228607 -101421689 - RMER15 LTR ERVL -3 572 200 2 1082 317 268 88 13 chrX 65231537 65231696 -101418600 - IAPEY3-int LTR ERVK -4250 3430 3260 2 1082 625 281 78 83 chrX 65234727 65235100 -101415196 - RMER15 LTR ERVL -203 372 2 2 1082 324 0 0 0 chrX 65236309 65236345 -101413951 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2 1082 2443 201 52 43 chrX 65236346 65237067 -101413229 - Lx4B LINE L1 -61 6915 6199 2 1082 2750 195 59 5 chrX 65237705 65238282 -101412014 - Lx4B LINE L1 -849 6209 5602 2 1082 1779 301 104 22 chrX 65238482 65239196 -101411100 - Lx8 LINE L1 -5 7468 6697 2 1082 353 388 31 0 chrX 65239201 65239215 -101411081 - B1F SINE Alu -11 138 6 2 1082 436 339 0 0 chrX 65239215 65239330 -101410966 - ID_B1 SINE B4 -23 201 87 2 1082 1064 66 0 0 chrX 65239428 65239564 -101410732 - L1_Mus2 LINE L1 -517 6049 5914 2 1082 2911 92 40 0 chrX 65239564 65239964 -101410332 + L1_Mus2 LINE L1 6150 6565 -1 2 1082 486 0 0 0 chrX 65244185 65244239 -101406057 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1082 360 0 0 0 chrX 65244239 65244278 -101406018 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 1082 611 346 83 39 chrX 65244802 65245395 -101404901 - L1MDa LINE L1 -4062 2571 1953 3 1082 225 269 50 92 chrX 65247043 65247162 -101403134 + L1M5 LINE L1 4467 4580 -1566 3 1082 24 0 0 0 chrX 65247397 65247421 -101402875 + AT_rich Low_complexity Low_complexity 1 24 0 3 1082 641 136 47 13 chrX 65247557 65247706 -101402590 + Lx3_Mus LINE L1 6856 7009 0 3 1082 189 0 0 0 chrX 65247927 65247948 -101402348 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1082 13495 27 2 0 chrX 65248509 65250202 -101400094 + L1Md_A LINE L1 1056 2851 -3035 3 1082 26 0 0 0 chrX 65250673 65250699 -101399597 + AT_rich Low_complexity Low_complexity 1 26 0 3 1082 21 0 0 0 chrX 65250725 65250746 -101399550 + AT_rich Low_complexity Low_complexity 1 21 0 3 1082 245 204 0 46 chrX 65250978 65251069 -101399227 - Lx LINE L1 -374 5926 5813 3 1082 24 32 0 0 chrX 65251967 65251998 -101398298 + AT_rich Low_complexity Low_complexity 1 31 0 3 1082 273 365 91 35 chrX 65252139 65252338 -101397958 + MLT1E1 LTR MaLR 440 649 -5 3 1082 461 293 210 14 chrX 65253226 65253513 -101396783 - L1Md_F2 LINE L1 -245 7399 7057 3 1082 1998 305 26 9 chrX 65253524 65254173 -101396123 - L1Md_F2 LINE L1 -627 7017 6358 3 1082 21240 148 22 25 chrX 65254236 65258078 -101392218 - L1Md_F2 LINE L1 -8 6574 1978 3 1082 341 40 40 0 chrX 65258078 65258128 -101392168 + (TTTG)n Simple_repeat Simple_repeat 4 55 0 3 1082 21240 90 2 12 chrX 65258128 65258924 -101391372 - L1Md_F2 LINE L1 -3906 1977 1185 3 1082 225 0 0 0 chrX 65258924 65258949 -101391347 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 1082 4727 171 21 28 chrX 65258949 65260080 -101390216 - L1Md_F2 LINE L1 -5522 1202 66 3 1082 301 231 26 77 chrX 65260498 65260615 -101389681 - L1M LINE L1 -810 5369 5259 3 1082 973 249 118 54 chrX 65260624 65261014 -101389282 + L1_Rod LINE L1 4618 5032 -815 3 1082 243 196 87 0 chrX 65261015 65261061 -101389235 + L1M3e LINE L1 759 808 -6222 3 1082 272 127 0 18 chrX 65261513 65261569 -101388727 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1082 429 273 0 0 chrX 65262153 65262252 -101388044 + PB1D10 SINE Alu 17 115 -2 3 1082 392 317 20 55 chrX 65262475 65262636 -101387660 + B3A SINE B2 60 216 0 3 1082 24 53 0 0 chrX 65262866 65262904 -101387392 + AT_rich Low_complexity Low_complexity 1 38 0 3 1082 3039 119 38 4 chrX 65263457 65263936 -101386360 + Lx3_Mus LINE L1 6496 6990 -19 3 1082 233 187 0 13 chrX 65263937 65264013 -101386283 + (TTAA)n Simple_repeat Simple_repeat 3 77 0 3 1082 6312 67 10 5 chrX 65264021 65264851 -101385445 + L1Md_F2 LINE L1 5749 6582 0 3 1082 317 154 21 21 chrX 65265741 65265834 -101384462 + GA-rich Low_complexity Low_complexity 2 94 0 3 1082 274 282 25 25 chrX 65267597 65267677 -101382619 + MTE-int LTR MaLR 366 445 -1135 3 1082 260 316 25 50 chrX 65267793 65267873 -101382423 + MLT-int LTR MaLR 686 763 -972 3 1082 29 47 0 0 chrX 65268403 65268446 -101381850 + AT_rich Low_complexity Low_complexity 1 43 0 3 1082 225 302 79 72 chrX 65268792 65268931 -101381365 + MLT1A1 LTR MaLR 265 404 -4 3 1082 235 324 29 51 chrX 65269426 65269777 -101380519 - L1MD LINE L1 -1822 4324 3982 3 1082 242 291 67 14 chrX 65270127 65270328 -101379968 + L1MD LINE L1 4812 5027 -1119 3 1082 296 253 150 54 chrX 65272247 65272414 -101377882 - Lx8 LINE L1 -85 7388 7206 3 1082 396 0 0 0 chrX 65272514 65272558 -101377738 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 3 1082 2850 6 3 0 chrX 65272635 65272959 -101377337 + L1Md_A LINE L1 6258 6582 0 3 1082 925 243 25 0 chrX 65273228 65273430 -101376866 - B3 SINE B2 -5 211 5 3 1082 831 125 0 0 chrX 65273570 65273738 -101376558 + (GAA)n Simple_repeat Simple_repeat 2 169 0 3 1083 285 280 70 18 chrX 65273908 65274079 -101376217 + L1MC5 LINE L1 7722 7901 -60 3 1083 651 262 0 28 chrX 65274189 65274334 -101375962 + B1_Mur2 SINE Alu 1 141 -8 3 1083 414 262 103 27 chrX 65274396 65274580 -101375716 + B3 SINE B2 2 199 -17 3 1083 26 0 0 0 chrX 65274587 65274613 -101375683 + AT_rich Low_complexity Low_complexity 1 26 0 3 1083 23666 82 13 4 chrX 65274634 65279690 -101370606 + L1Md_F2 LINE L1 446 5585 -298 3 1083 7588 65 8 2 chrX 65279691 65280670 -101369626 + L1Md_F2 LINE L1 5587 6571 -11 3 1083 430 361 34 2 chrX 65280685 65280856 -101369440 + B3 SINE B2 4 188 -10 3 1083 202 152 0 61 chrX 65280936 65280985 -101369311 + T-rich Low_complexity Low_complexity 2 47 0 3 1083 205 244 0 0 chrX 65281109 65281154 -101369142 + L2 LINE L2 2022 2066 -1353 3 1083 195 323 48 48 chrX 65281566 65281670 -101368626 - MIRc SINE MIR -65 203 100 3 1083 25 0 0 0 chrX 65282423 65282448 -101367848 + AT_rich Low_complexity Low_complexity 1 25 0 3 1083 742 269 67 5 chrX 65283184 65283378 -101366918 + B3 SINE B2 8 213 -3 3 1083 281 324 86 43 chrX 65283487 65283603 -101366693 + RSINE1 SINE B4 2 122 -43 3 1083 3106 14 17 3 chrX 65283604 65283966 -101366330 + IAPLTR1_Mm LTR ERVK 1 367 0 3 1083 3416 74 36 13 chrX 65283966 65284680 -101365616 + IAPEz-int LTR ERVK 8 662 -5819 3 1083 442 66 0 32 chrX 65284680 65284743 -101365553 + IAPEz-int LTR ERVK 1359 1419 -5062 3 1083 1763 123 4 15 chrX 65284732 65284997 -101365299 + IAPEz-int LTR ERVK 2236 2497 -5183 3 1083 914 81 24 0 chrX 65284994 65285117 -101365179 + IAPEz-int LTR ERVK 4785 4910 -2770 3 1083 26119 18 2 2 chrX 65285117 65288073 -101362223 + IAPEz-int LTR ERVK 3525 6481 0 3 1083 3106 14 17 3 chrX 65288073 65288435 -101361861 + IAPLTR1_Mm LTR ERVK 1 367 0 3 1083 31291 106 28 14 chrX 65288518 65294063 -101356233 + Lx3_Mus LINE L1 14 5920 -1089 3 1083 4910 113 12 7 chrX 65294103 65294844 -101355452 + Lx3_Mus LINE L1 5907 6651 -358 3 1083 1287 114 81 0 chrX 65294842 65295052 -101355244 + Lx3_Mus LINE L1 6775 7001 -8 3 1083 989 209 14 22 chrX 65295117 65295384 -101354912 + Lx4B LINE L1 6591 6841 -159 3 1083 716 59 20 0 chrX 65295397 65295498 -101354798 + (GAAA)n Simple_repeat Simple_repeat 1 103 0 3 1083 553 331 5 32 chrX 65295913 65296100 -101354196 + MER63A DNA AcHobo 1 182 -28 3 1083 27 73 0 0 chrX 65296583 65296638 -101353658 + AT_rich Low_complexity Low_complexity 1 55 0 3 1083 224 202 0 23 chrX 65297072 65297158 -101353138 + (CAGAGA)n Simple_repeat Simple_repeat 6 89 0 3 1083 483 198 4 0 chrX 65297162 65297380 -101352916 + GA-rich Low_complexity Low_complexity 1 218 0 3 1083 258 299 18 18 chrX 65298101 65298210 -101352086 + L1M7 LINE L1 1293 1401 -4817 3 1083 258 136 0 0 chrX 65298290 65298334 -101351962 + (A)n Simple_repeat Simple_repeat 1 44 0 3 1083 187 103 51 0 chrX 65299102 65299141 -101351155 + CT-rich Low_complexity Low_complexity 2 42 0 3 1083 446 301 62 31 chrX 65299498 65299690 -101350606 - L1M2 LINE L1 -971 5172 4975 3 1083 287 283 157 21 chrX 65299724 65299966 -101350330 - L1_Mur3 LINE L1 -840 5303 5029 3 1083 328 319 52 26 chrX 65300143 65300410 -101349886 + L1MA5 LINE L1 6017 6290 -10 3 1083 317 250 216 0 chrX 65300420 65300508 -101349788 + RSINE1 SINE B4 3 109 -56 3 1083 5582 44 3 4 chrX 65300790 65301482 -101348814 + L1Md_F3 LINE L1 5880 6570 -14 3 1083 304 377 57 38 chrX 65302058 65302270 -101348026 + RMER15 LTR ERVL 344 559 -16 3 1083 4901 255 39 37 chrX 65302476 65302902 -101347394 - Lx6 LINE L1 -149 7311 6896 3 1083 495 0 0 0 chrX 65302902 65302957 -101347339 + (TC)n Simple_repeat Simple_repeat 1 55 0 3 1083 4901 255 39 37 chrX 65302957 65303795 -101346501 - Lx6 LINE L1 -565 6895 6045 3 1083 200 206 0 0 chrX 65303883 65303917 -101346379 + (TATATG)n Simple_repeat Simple_repeat 6 39 0 3 1083 893 176 6 0 chrX 65304519 65304695 -101345601 + (TA)n Simple_repeat Simple_repeat 2 178 0 3 1083 243 275 43 0 chrX 65304698 65304767 -101345529 + (TATATG)n Simple_repeat Simple_repeat 3 74 0 3 1083 29 28 0 0 chrX 65304819 65304855 -101345441 + AT_rich Low_complexity Low_complexity 1 36 0 3 1083 23 33 0 0 chrX 65305147 65305177 -101345119 + AT_rich Low_complexity Low_complexity 1 30 0 3 1083 264 59 0 0 chrX 65306563 65306597 -101343699 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 3 1083 5277 176 20 16 chrX 65306788 65307821 -101342475 - Lx4B LINE L1 -478 6580 5539 3 1083 2411 191 15 21 chrX 65307818 65308298 -101341998 + Lx4B LINE L1 6561 7037 -21 3 1083 461 62 15 0 chrX 65308298 65308363 -101341933 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 3 1083 25 0 0 0 chrX 65308491 65308516 -101341780 + AT_rich Low_complexity Low_complexity 1 25 0 3 1083 265 377 31 31 chrX 65309342 65309564 -101340732 + L1MEd LINE L1 530 751 -5368 3 1083 649 300 36 26 chrX 65310046 65310351 -101339945 - L1MB3 LINE L1 -106 6077 5770 3 1083 315 0 0 0 chrX 65310457 65310492 -101339804 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 1083 279 0 0 0 chrX 65310492 65310522 -101339774 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1083 34 24 0 0 chrX 65310522 65310563 -101339733 + AT_rich Low_complexity Low_complexity 1 41 0 3 1083 650 286 85 0 chrX 65310684 65310883 -101339413 - B3 SINE B2 0 216 1 3 1083 549 268 21 57 chrX 65310989 65311183 -101339113 + B3A SINE B2 3 189 -9 3 1083 252 0 0 0 chrX 65311183 65311211 -101339085 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 3 1083 21 57 0 0 chrX 65311546 65311581 -101338715 + AT_rich Low_complexity Low_complexity 1 35 0 3 1083 239 310 80 31 chrX 65312244 65312407 -101337889 + Lx8 LINE L1 5826 5996 -1477 3 1083 1591 219 41 19 chrX 65312532 65312896 -101337400 - ORR1D1 LTR MaLR -2 372 1 3 1083 2706 281 58 34 chrX 65312943 65313823 -101336473 + Lx8 LINE L1 6208 7112 -361 3 1083 333 0 0 0 chrX 65313823 65313860 -101336436 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1083 489 34 0 0 chrX 65313961 65314020 -101336276 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 1083 765 33 0 0 chrX 65314020 65314111 -101336185 + (TA)n Simple_repeat Simple_repeat 2 93 0 3 1083 26 0 0 0 chrX 65314399 65314425 -101335871 + AT_rich Low_complexity Low_complexity 1 26 0 3 1083 8390 116 31 82 chrX 65314850 65316696 -101333600 + Lx2A LINE L1 5243 7002 -6 3 1083 260 353 17 8 chrX 65316860 65316980 -101333316 + MER20 DNA MER1_type 93 213 -6 3 1083 35 95 0 0 chrX 65318056 65318161 -101332135 + AT_rich Low_complexity Low_complexity 1 105 0 3 1083 747 237 48 15 chrX 65318695 65319010 -101331286 + MTD LTR MaLR 23 411 -8 3 1083 340 279 52 8 chrX 65319875 65319970 -101330326 - B1F2 SINE Alu -15 105 10 3 1083 21 57 0 0 chrX 65320046 65320081 -101330215 + AT_rich Low_complexity Low_complexity 1 35 0 3 1083 234 128 0 0 chrX 65321377 65321416 -101328880 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 3 1083 184 231 0 0 chrX 65322050 65322089 -101328207 - MIRm SINE MIR 0 276 238 4 1083 378 44 29 29 chrX 65323160 65323230 -101327066 + (TTTTG)n Simple_repeat Simple_repeat 2 71 0 4 1083 269 377 59 43 chrX 65323485 65323740 -101326556 - MIR SINE MIR -1 261 3 4 1083 24 0 0 0 chrX 65324676 65324700 -101325596 + AT_rich Low_complexity Low_complexity 1 24 0 4 1083 316 155 52 0 chrX 65324881 65324939 -101325357 + HAL1-3A_ME LINE L1 1976 2036 -822 4 1083 477 0 0 0 chrX 65325073 65325126 -101325170 + (TC)n Simple_repeat Simple_repeat 1 53 0 4 1083 261 0 0 0 chrX 65325126 65325154 -101325142 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 1083 327 382 13 34 chrX 65325760 65325909 -101324387 - MLT1J2 LTR MaLR -273 175 30 4 1083 1760 250 74 36 chrX 65326056 65326554 -101323742 - Lx6 LINE L1 -11 7449 6933 4 1083 234 0 0 0 chrX 65326577 65326603 -101323693 + (TTTTTG)n Simple_repeat Simple_repeat 5 30 0 4 1083 243 235 0 23 chrX 65326820 65326907 -101323389 - L1MA10 LINE L1 -2 6332 6248 4 1083 389 275 167 23 chrX 65326964 65327340 -101322956 - L1M2 LINE L1 -549 5742 5320 4 1083 403 176 29 0 chrX 65327350 65327452 -101322844 + Lx2 LINE L1 6893 6997 0 4 1083 180 0 0 0 chrX 65327488 65327508 -101322788 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 1083 25 31 0 0 chrX 65327889 65327921 -101322375 + AT_rich Low_complexity Low_complexity 1 32 0 4 1083 383 248 1 40 chrX 65328102 65328205 -101322091 - B4A SINE B4 -61 231 132 4 1083 187 29 86 0 chrX 65329165 65329200 -101321096 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 4 1083 549 133 0 0 chrX 65329457 65329555 -101320741 + (TG)n Simple_repeat Simple_repeat 2 99 0 4 1083 439 211 0 16 chrX 65329607 65329790 -101320506 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1083 408 132 26 0 chrX 65329905 65329981 -101320315 - L1_Mur2 LINE L1 -1039 4838 4761 4 1083 681 145 26 0 chrX 65329971 65330088 -101320208 + L1_Mur2 LINE L1 4653 4772 -1105 4 1083 6263 173 18 5 chrX 65330086 65331235 -101319061 + Lx4B LINE L1 5712 6875 -183 4 1083 3345 112 16 65 chrX 65331380 65331629 -101318667 + RMER17A2 LTR ERVK 1 245 -661 4 1083 2978 74 8 2 chrX 65331629 65332023 -101318273 + MTA_Mm LTR MaLR 1 396 0 4 1083 3345 148 20 125 chrX 65332023 65332819 -101317477 + RMER17A2 LTR ERVK 242 889 0 4 1083 505 302 84 13 chrX 65332855 65333080 -101317216 + Lx8 LINE L1 7136 7376 -97 4 1083 3017 58 36 5 chrX 65333145 65333529 -101316767 - MTA_Mm LTR MaLR 0 396 1 4 1083 7421 88 4 75 chrX 65333529 65334710 -101315586 - MTA_Mm-int LTR MaLR 0 1098 1 4 1083 3152 61 2 5 chrX 65334710 65335107 -101315189 - MTA_Mm LTR MaLR 0 396 1 4 1083 1256 191 33 0 chrX 65335341 65335582 -101314714 + Lx7 LINE L1 6763 7011 -685 4 1083 1052 103 0 7 chrX 65335584 65335730 -101314566 + B1_Mm SINE Alu 3 147 0 4 1083 180 0 0 0 chrX 65335731 65335751 -101314545 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 4 1083 871 333 5 19 chrX 65335789 65336168 -101314128 + Lx9 LINE L1 7099 7472 -172 4 1083 2448 61 0 135 chrX 65336691 65337091 -101313205 - ORR1A1 LTR MaLR 0 346 1 4 1083 21 36 0 0 chrX 65337462 65337490 -101312806 + AT_rich Low_complexity Low_complexity 1 28 0 4 1083 2956 247 29 11 chrX 65337495 65338224 -101312072 + Lx6 LINE L1 6718 7459 -1 4 1083 772 303 88 45 chrX 65338372 65338680 -101311616 - MLT1F-int LTR MaLR -156 1333 1013 4 1083 336 362 85 13 chrX 65338707 65339012 -101311284 + L1MCa LINE L1 239 565 -5480 4 1083 24 0 0 0 chrX 65339344 65339368 -101310928 + AT_rich Low_complexity Low_complexity 1 24 0 4 1083 361 248 82 13 chrX 65339530 65339689 -101310607 + L1MCa LINE L1 1044 1213 -5538 4 1083 637 329 28 28 chrX 65340340 65340553 -101309743 + B3 SINE B2 4 216 0 4 1083 594 75 0 0 chrX 65341740 65341820 -101308476 + (TA)n Simple_repeat Simple_repeat 1 80 0 4 1083 180 0 0 0 chrX 65342839 65342859 -101307437 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 4 1083 2454 178 11 0 chrX 65342896 65343335 -101306961 - Lx2 LINE L1 -44 6953 6510 4 1083 410 0 0 20 chrX 65343543 65343594 -101306702 + (TAAAA)n Simple_repeat Simple_repeat 3 52 0 4 1083 242 268 110 27 chrX 65343595 65343668 -101306628 + ID4_ SINE ID 2 80 -3 4 1083 377 219 63 19 chrX 65343832 65343990 -101306306 + L1MA6 LINE L1 6135 6299 -1 4 1083 466 254 29 44 chrX 65344036 65344172 -101306124 - ID_B1 SINE B4 -6 218 85 4 1083 6316 104 21 3 chrX 65344499 65345414 -101304882 + Lx3_Mus LINE L1 6078 7008 -1 4 1083 238 310 20 10 chrX 65345416 65345517 -101304779 + MLT1E3 LTR MaLR 181 282 -371 4 1083 6474 81 9 2 chrX 65345585 65346493 -101303803 - L1_Mus2 LINE L1 -1 6565 5652 4 1083 300 411 6 6 chrX 65346522 65346681 -101303615 + MLT1E3 LTR MaLR 401 559 -65 4 1083 360 298 85 28 chrX 65346967 65347330 -101302966 - L1MC2 LINE L1 -318 6026 5643 4 1083 1863 240 252 13 chrX 65347486 65348380 -101301916 - L1_Mur3 LINE L1 -116 5764 4658 4 1083 1386 308 17 20 chrX 65348409 65348869 -101301427 + Lx5 LINE L1 6479 6937 -113 4 1083 639 0 0 0 chrX 65348869 65348940 -101301356 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 4 1083 35954 49 15 8 chrX 65348958 65355206 -101295090 - L1Md_T LINE L1 -1 6581 284 4 1083 24 53 0 0 chrX 65355501 65355539 -101294757 + AT_rich Low_complexity Low_complexity 1 38 0 4 1083 822 220 14 5 chrX 65355682 65355901 -101294395 + L1_Mur2 LINE L1 1822 2042 -3835 4 1083 4031 90 4 4 chrX 65356102 65356803 -101293493 - Lx3A LINE L1 -999 5982 5285 4 1083 7000 93 23 1 chrX 65356803 65357797 -101292499 + Lx3_Mus LINE L1 5994 7009 0 4 1083 222 37 0 0 chrX 65358108 65358135 -101292161 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 4 1083 1280 198 0 8 chrX 65358139 65358373 -101291923 + RLTR26 LTR ERVK 120 351 -291 4 1083 302 341 107 14 chrX 65358775 65358915 -101291381 + MIRb SINE MIR 39 191 -77 4 1083 334 180 0 33 chrX 65358974 65359066 -101291230 + Lx9 LINE L1 7536 7624 -20 4 1083 2168 174 33 40 chrX 65359310 65359734 -101290562 + MTC LTR MaLR 1 421 0 4 1083 393 39 0 0 chrX 65360361 65360412 -101289884 + (TAA)n Simple_repeat Simple_repeat 2 52 0 4 1083 1105 339 20 20 chrX 65360994 65361500 -101288796 + Lx8 LINE L1 6405 6910 -563 4 1083 343 304 34 34 chrX 65361501 65361620 -101288676 + PB1D9 SINE Alu 2 120 0 4 1083 459 350 104 8 chrX 65361623 65361891 -101288405 + Lx8 LINE L1 6901 7194 -279 4 1083 465 224 120 8 chrX 65361980 65362097 -101288199 + RMER19B LTR ERVK 735 864 -38 4 1083 3114 69 0 12 chrX 65362097 65362510 -101287786 + L1_Mus2 LINE L1 6157 6564 -2 4 1083 764 361 40 48 chrX 65362757 65363529 -101286767 + Lx8 LINE L1 6300 7067 -406 4 1083 4190 84 12 20 chrX 65363529 65364122 -101286174 + L1Md_F2 LINE L1 5994 6581 -1 4 1083 764 361 40 48 chrX 65364122 65364169 -101286127 + Lx8 LINE L1 7068 7113 -360 4 1083 1777 184 80 11 chrX 65364194 65364556 -101285740 - ORR1B1 LTR MaLR 0 394 8 4 1083 272 319 136 18 chrX 65364585 65365020 -101285276 + L1M2 LINE L1 4736 5221 -922 4 1083 29761 91 7 15 chrX 65365121 65370329 -101279967 + L1Md_F2 LINE L1 457 5586 -297 4 1083 7281 55 27 8 chrX 65370329 65371292 -101279004 + L1Md_F2 LINE L1 5587 6567 -15 4 1083 311 255 53 11 chrX 65371293 65371388 -101278908 + L1M5 LINE L1 5346 5444 -680 4 1083 358 292 8 8 chrX 65371390 65371521 -101278775 + L1M2 LINE L1 5483 5613 -678 4 1083 889 107 11 56 chrX 65371707 65371885 -101278411 + Lx LINE L1 6478 6647 -7 4 1083 8050 139 11 15 chrX 65371929 65373496 -101276800 + Lx3A LINE L1 5424 6981 0 4 1083 280 358 54 38 chrX 65374013 65374199 -101276097 + Tigger5 DNA MER2_type 2217 2405 -1 4 1083 558 0 0 0 chrX 65374233 65374295 -101276001 + (GA)n Simple_repeat Simple_repeat 2 63 0 4 1083 952 229 26 7 chrX 65374739 65374982 -101275314 + ORR1D1 LTR MaLR 3 258 -112 4 1083 524 73 12 0 chrX 65374982 65375064 -101275232 + (TC)n Simple_repeat Simple_repeat 2 84 0 4 1083 849 187 94 21 chrX 65375065 65375255 -101275041 + ORR1D1 LTR MaLR 164 367 -7 4 1083 2085 108 0 87 chrX 65375255 65375600 -101274696 + ORR1A2 LTR MaLR 1 315 -12 4 1083 855 226 173 19 chrX 65375670 65375994 -101274302 + ORR1D1 LTR MaLR 1 374 0 4 1083 4804 243 82 41 chrX 65375994 65377310 -101272986 + ORR1D1-int LTR MaLR 1 1370 0 4 1083 496 318 8 0 chrX 65377317 65377446 -101272850 + ORR1D1 LTR MaLR 8 137 -233 4 1083 502 329 0 0 chrX 65379874 65380017 -101270279 + ORR1D1 LTR MaLR 209 351 -28 4 1083 441 350 48 61 chrX 65380105 65380400 -101269896 - B4A SINE B4 0 292 2 4 1083 479 140 10 7 chrX 65380692 65380785 -101269511 + ORR1B1 LTR MaLR 255 368 -26 4 1083 43113 71 14 14 chrX 65380785 65386764 -101263532 + IAP-d-int LTR ERVK 565 6542 0 4 1083 2551 87 8 48 chrX 65386764 65387138 -101263158 + RLTR10D LTR ERVK 1 359 0 4 1083 605 81 0 0 chrX 65387138 65387224 -101263072 - L1_Mus1 LINE L1 -288 6278 6193 4 1083 1166 95 18 0 chrX 65387224 65387393 -101262903 + L1_Mus1 LINE L1 6395 6566 -1 4 1083 2640 122 7 46 chrX 65387409 65387846 -101262450 + Lx LINE L1 6230 6649 -5 4 1083 1196 137 24 5 chrX 65387842 65388054 -101262242 + Lx3_Mus LINE L1 6775 6990 -19 4 1083 200 234 13 25 chrX 65388196 65388275 -101262021 + (TATG)n Simple_repeat Simple_repeat 4 81 0 4 1083 226 133 16 62 chrX 65388680 65388744 -101261552 + (TTTG)n Simple_repeat Simple_repeat 1 61 0 4 1083 1116 84 0 0 chrX 65388754 65388897 -101261399 - B1_Mus1 SINE Alu -5 143 1 4 1083 21 36 0 0 chrX 65389014 65389042 -101261254 + AT_rich Low_complexity Low_complexity 1 28 0 4 1083 23 0 0 0 chrX 65389116 65389139 -101261157 + AT_rich Low_complexity Low_complexity 1 23 0 4 1083 305 309 0 0 chrX 65389828 65389912 -101260384 + (CATATA)n Simple_repeat Simple_repeat 6 89 0 4 1083 2027 57 4 19 chrX 65391247 65391516 -101258780 - L1_Mus2 LINE L1 0 6566 6302 4 1083 825 87 0 0 chrX 65392214 65392329 -101257967 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 4 1083 723 12 0 0 chrX 65393264 65393348 -101256948 + (TG)n Simple_repeat Simple_repeat 2 85 0 4 1083 498 109 0 0 chrX 65394371 65394463 -101255833 + (TC)n Simple_repeat Simple_repeat 1 92 0 4 1083 531 0 0 0 chrX 65394463 65394522 -101255774 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1083 4574 207 42 46 chrX 65394608 65395562 -101254734 + Lx9 LINE L1 6514 7457 -187 4 1083 405 86 0 0 chrX 65395562 65395620 -101254676 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 1083 4574 207 42 46 chrX 65395620 65395721 -101254575 + Lx9 LINE L1 7458 7575 -69 4 1083 1109 83 0 0 chrX 65395721 65395866 -101254430 + B1_Mus2 SINE Alu 1 145 -2 4 1083 879 10 0 0 chrX 65395869 65395969 -101254327 + (GAA)n Simple_repeat Simple_repeat 2 101 0 4 1083 4574 207 42 46 chrX 65395969 65396037 -101254259 + Lx9 LINE L1 7576 7636 -8 4 1083 1795 262 65 42 chrX 65396139 65396707 -101253589 + RLTR40 LTR ERVK 8 581 -236 4 1083 414 0 0 0 chrX 65396707 65396753 -101253543 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1083 1795 262 65 42 chrX 65396753 65396825 -101253471 + RLTR40 LTR ERVK 582 663 -154 4 1083 6207 38 10 7 chrX 65397310 65398079 -101252217 - L1Md_F2 LINE L1 0 6582 5811 5 1083 262 420 18 12 chrX 65398231 65398395 -101251901 + L4 LINE RTE 1511 1675 -354 5 1083 240 329 14 0 chrX 65398851 65398924 -101251372 - L2a LINE L2 -37 3389 3316 5 1083 275 330 204 0 chrX 65399093 65399299 -101250997 - MIR SINE MIR -10 252 5 5 1083 863 275 99 31 chrX 65399805 65400007 -101250289 + RLTR40 LTR ERVK 347 563 -254 5 1083 542 42 30 40 chrX 65400007 65400107 -101250189 - L1Md_F2 LINE L1 -10 6572 6474 5 1083 863 275 99 31 chrX 65400107 65400287 -101250009 + RLTR40 LTR ERVK 564 754 -63 5 1083 392 241 23 11 chrX 65400286 65400374 -101249922 - MER44B DNA MER2_type -307 243 155 5 1083 387 0 0 0 chrX 65400550 65400593 -101249703 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1083 5508 157 29 14 chrX 65400611 65401546 -101248750 + Lx4A LINE L1 6052 7000 -58 5 1083 242 235 12 12 chrX 65401544 65401626 -101248670 + Lx9 LINE L1 7529 7610 -34 5 1083 285 313 0 0 chrX 65402380 65402463 -101247833 + B3 SINE B2 3 85 -131 5 1083 1406 58 15 50 chrX 65403081 65403282 -101247014 + B2_Mm2 SINE B2 2 195 0 5 1083 1034 129 0 0 chrX 65403301 65403448 -101246848 + B1_Mus1 SINE Alu 1 147 -1 5 1083 5362 97 17 3 chrX 65403738 65404497 -101245799 + L1_Mus3 LINE L1 5868 6637 -1 5 1083 22 99 0 0 chrX 65404831 65404902 -101245394 + AT_rich Low_complexity Low_complexity 1 71 0 5 1084 387 0 0 0 chrX 65405483 65405526 -101244770 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1084 396 0 0 0 chrX 65405526 65405569 -101244727 + (GA)n Simple_repeat Simple_repeat 2 45 0 5 1084 28 48 0 0 chrX 65405690 65405732 -101244564 + AT_rich Low_complexity Low_complexity 1 42 0 5 1084 422 292 56 9 chrX 65405775 65406006 -101244290 + L1ME1 LINE L1 5657 5898 -281 5 1084 259 227 45 11 chrX 65406105 65406194 -101244102 + L1ME1 LINE L1 6086 6177 -2 5 1084 1559 98 0 13 chrX 65407154 65407382 -101242914 - L1Md_F2 LINE L1 -5 6577 6353 5 1084 3192 48 6 4 chrX 65407382 65407797 -101242499 - L1Md_F2 LINE L1 -527 6055 5667 5 1084 230 242 10 31 chrX 65407896 65407994 -101242302 + (TA)n Simple_repeat Simple_repeat 2 97 0 5 1084 615 334 68 53 chrX 65408089 65408804 -101241492 + L1M4b LINE L1 1242 2140 -4962 5 1084 834 273 71 148 chrX 65408825 65409177 -101241119 + MTE2b LTR MaLR 9 333 -46 5 1084 664 345 68 8 chrX 65409424 65409672 -101240624 + Lx8 LINE L1 7051 7313 -160 5 1084 414 0 0 0 chrX 65409694 65409740 -101240556 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 1084 368 373 84 4 chrX 65410442 65410668 -101239628 - MLT1E1 LTR MaLR -2 652 409 5 1084 531 311 10 63 chrX 65410832 65411038 -101239258 - B3A SINE B2 -2 196 2 5 1084 311 338 75 0 chrX 65411167 65411300 -101238996 + B1F SINE Alu 1 143 -6 5 1084 1140 142 5 10 chrX 65411504 65411711 -101238585 + Lx LINE L1 6449 6654 0 5 1084 692 99 48 21 chrX 65412207 65412352 -101237944 + RMER17B LTR ERVK 312 460 -498 5 1084 24 53 0 0 chrX 65412546 65412584 -101237712 + AT_rich Low_complexity Low_complexity 1 38 0 5 1084 23 0 0 0 chrX 65413237 65413260 -101237036 + AT_rich Low_complexity Low_complexity 1 23 0 5 1084 1732 146 66 0 chrX 65413260 65413562 -101236734 - Lx3A LINE L1 -12 6969 6648 5 1084 216 319 148 25 chrX 65413611 65413747 -101236549 + L2b LINE L2 2591 2738 -681 5 1084 495 0 0 0 chrX 65413747 65413802 -101236494 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 1084 261 0 0 0 chrX 65413803 65413832 -101236464 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 1084 216 319 148 25 chrX 65413832 65413889 -101236407 + L2b LINE L2 2739 2807 -612 5 1084 194 346 181 18 chrX 65414066 65414287 -101236009 + L2b LINE L2 3045 3303 -84 5 1084 21 0 0 0 chrX 65414345 65414366 -101235930 + AT_rich Low_complexity Low_complexity 1 21 0 5 1084 19631 108 14 11 chrX 65414601 65418419 -101231877 + L1Md_F2 LINE L1 238 4054 -1829 5 1084 31769 82 8 4 chrX 65418422 65423598 -101226698 + L1Md_F2 LINE L1 393 5586 -297 5 1084 7814 60 1 1 chrX 65423598 65424592 -101225704 + L1Md_F2 LINE L1 5587 6580 -2 5 1084 10964 91 5 1 chrX 65424601 65426144 -101224152 + L1Md_F2 LINE L1 4038 5586 -297 5 1084 7579 68 1 3 chrX 65426145 65427130 -101223166 + L1Md_F2 LINE L1 5588 6570 -12 5 1084 2054 285 21 15 chrX 65427462 65428186 -101222110 - L1_Mur3 LINE L1 -427 5453 4726 5 1084 390 260 65 8 chrX 65428316 65428440 -101221856 + Lx7 LINE L1 6057 6187 -1509 5 1084 295 371 16 0 chrX 65428443 65428567 -101221729 + Lx8 LINE L1 6607 6732 -741 5 1084 397 342 0 27 chrX 65428577 65428727 -101221569 - Lx8 LINE L1 -385 7088 6943 5 1084 658 347 91 24 chrX 65428815 65429068 -101221228 + Lx8 LINE L1 6827 7089 -384 5 1084 500 0 17 0 chrX 65429068 65429128 -101221168 + (TTA)n Simple_repeat Simple_repeat 3 63 0 5 1084 658 347 91 24 chrX 65429128 65429293 -101221003 + Lx8 LINE L1 7090 7273 -200 5 1084 405 86 0 0 chrX 65429294 65429352 -101220944 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 1084 936 256 66 0 chrX 65429544 65429771 -101220525 - Lx6 LINE L1 -26 7434 7193 5 1084 25 0 0 0 chrX 65429828 65429853 -101220443 + AT_rich Low_complexity Low_complexity 1 25 0 5 1084 198 0 0 0 chrX 65430069 65430091 -101220205 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1084 41160 5 0 0 chrX 65430117 65436484 -101213812 - L1Md_A LINE L1 0 6582 215 5 1084 28 0 0 0 chrX 65436503 65436531 -101213765 + AT_rich Low_complexity Low_complexity 1 28 0 5 1084 25426 111 10 6 chrX 65436642 65441299 -101208997 + L1_Mus1 LINE L1 1893 6565 -2 5 1084 2602 97 44 0 chrX 65441328 65441711 -101208585 + MTA_Mm LTR MaLR 1 400 0 5 1084 7490 89 31 8 chrX 65441711 65442785 -101207511 + MTA_Mm-int LTR MaLR 1 1098 0 5 1084 2882 66 39 8 chrX 65442785 65443169 -101207127 + MTA_Mm LTR MaLR 1 396 0 5 1084 240 352 99 0 chrX 65445840 65446002 -101204294 - MER58A DNA MER1_type -17 207 30 5 1084 1078 283 43 17 chrX 65446143 65446563 -101203733 + L1_Rod LINE L1 470 900 -6272 5 1084 29927 109 13 15 chrX 65446566 65452002 -101198294 + L1Md_F2 LINE L1 217 5586 -297 5 1084 7031 94 8 4 chrX 65452003 65452994 -101197302 + L1Md_F2 LINE L1 5588 6582 0 5 1084 1806 281 92 18 chrX 65453001 65453576 -101196720 + L1_Rod LINE L1 1335 1952 -3895 5 1084 1677 229 52 8 chrX 65453576 65453977 -101196319 - MTD LTR MaLR 0 419 1 5 1084 1806 281 92 18 chrX 65453977 65454217 -101196079 + L1_Rod LINE L1 1953 2209 -3638 5 1084 3398 129 6 58 chrX 65454220 65455262 -101195034 - L1Md_A LINE L1 -4248 1635 644 5 1084 3696 158 44 18 chrX 65456607 65456852 -101193444 - RMER6A LTR ERVK 0 756 490 5 1084 612 0 0 0 chrX 65456852 65456920 -101193376 + (TC)n Simple_repeat Simple_repeat 1 68 0 5 1084 3696 158 44 18 chrX 65456920 65457403 -101192893 - RMER6A LTR ERVK -267 489 9 5 1084 21 0 0 0 chrX 65458269 65458290 -101192006 + AT_rich Low_complexity Low_complexity 1 21 0 5 1084 401 302 16 36 chrX 65458988 65459200 -101191096 + MTD LTR MaLR 3 170 -249 5 1084 13690 71 2 7 chrX 65459200 65460019 -101190277 + L1Md_F2 LINE L1 4060 4876 -1007 5 1084 4649 46 2 0 chrX 65460019 65460585 -101189711 - L1Md_T LINE L1 0 6582 6016 5 1084 13690 71 2 7 chrX 65460585 65460954 -101189342 + L1Md_F2 LINE L1 4877 5244 -639 5 1084 2953 60 10 8 chrX 65460954 65461342 -101188954 + L1Md_F3 LINE L1 6196 6584 0 5 1084 13690 66 6 9 chrX 65461342 65462663 -101187633 + L1Md_F2 LINE L1 5245 6559 -23 5 1084 2936 35 0 0 chrX 65462663 65463009 -101187287 - ORR1A0 LTR MaLR 0 346 1 5 1084 398 258 79 16 chrX 65463056 65463182 -101187114 - L1_Rod LINE L1 -3513 2334 2201 5 1084 732 137 14 7 chrX 65463186 65463326 -101186970 + CT-rich Low_complexity Low_complexity 4 144 0 5 1084 277 263 92 0 chrX 65463436 65463512 -101186784 - PB1D7 SINE Alu -36 84 2 5 1084 391 332 56 52 chrX 65463951 65464164 -101186132 + ID_B1 SINE B4 10 223 -1 5 1084 858 173 0 0 chrX 65464383 65464545 -101185751 + CT-rich Low_complexity Low_complexity 3 164 0 5 1084 1370 92 26 9 chrX 65464547 65464778 -101185518 - L1_Mus3 LINE L1 -2 6636 6402 5 1084 600 69 40 0 chrX 65464791 65464892 -101185404 - L1Md_F2 LINE L1 -1 6581 6477 5 1084 12915 74 3 1 chrX 65464919 65466654 -101183642 + L1Md_F2 LINE L1 3847 5586 -297 5 1084 7224 78 19 3 chrX 65466654 65467634 -101182662 + L1Md_F2 LINE L1 5587 6582 0 5 1084 294 318 27 108 chrX 65467776 65467924 -101182372 + MLT2B2 LTR ERVL 387 522 -40 5 1084 324 274 240 13 chrX 65468502 65468796 -101181500 - L1MEc LINE L1 -4627 1788 1344 5 1084 2992 98 96 4 chrX 65468813 65469283 -101181013 + L1_Mus3 LINE L1 6120 6632 -6 5 1084 1501 263 69 20 chrX 65469459 65469906 -101180390 - Lx8 LINE L1 -15 7458 6990 5 1084 447 321 94 18 chrX 65469992 65470268 -101180028 - L1MEc LINE L1 -5735 665 369 5 1084 446 72 22 67 chrX 65470984 65471074 -101179222 + RLTR19-int LTR ERVK 1030 1115 -5022 5 1084 189 0 0 0 chrX 65471075 65471096 -101179200 + (TTA)n Simple_repeat Simple_repeat 1 21 0 5 1084 7496 72 11 3 chrX 65471096 65472380 -101177916 - L1Md_F2 LINE L1 -23 6559 5256 5 1084 636 229 39 29 chrX 65472381 65472588 -101177708 + RLTR19-int LTR ERVK 1141 1349 -4788 5 1084 4783 140 13 5 chrX 65472610 65473380 -101176916 + Lx3A LINE L1 6196 6971 -10 5 1084 5939 90 0 8 chrX 65473380 65474421 -101175875 + L1_Mus2 LINE L1 5073 6106 -460 5 1084 420 63 0 0 chrX 65474423 65474486 -101175810 + L1_Mus2 LINE L1 6504 6566 0 5 1084 241 252 132 16 chrX 65474536 65474665 -101175631 + MTC-int LTR MaLR 1044 1187 -71 5 1084 287 247 71 0 chrX 65474814 65474899 -101175397 + MMTV-int LTR ERVK 5149 5239 -2014 5 1084 786 88 9 0 chrX 65475127 65475240 -101175056 - L1_Mm LINE L1 -425 5458 5345 5 1084 1479 119 13 4 chrX 65475242 65475470 -101174826 + Lx LINE L1 6420 6649 -5 5 1084 261 298 85 24 chrX 65475760 65475925 -101174371 + ETnERV3-int LTR ERVK 5044 5218 -590 5 1084 1206 125 0 20 chrX 65478424 65478620 -101171676 + B2_Mm2 SINE B2 1 192 -3 5 1084 6285 84 7 0 chrX 65478790 65479686 -101170610 - L1_Mur1 LINE L1 -1455 4431 3530 5 1084 4694 113 4 14 chrX 65479686 65480394 -101169902 + Lx3A LINE L1 6275 6975 -6 5 1084 8277 133 35 20 chrX 65481385 65482908 -101167388 + Lx2B LINE L1 5438 6990 -10 5 1084 412 300 24 39 chrX 65483231 65483410 -101166886 + B3A SINE B2 2 172 -23 5 1084 224 267 0 16 chrX 65484914 65484975 -101165321 - B4A SINE B4 -207 85 26 5 1084 262 207 59 35 chrX 65485119 65485204 -101165092 + Lx9 LINE L1 7333 7419 -225 5 1084 414 0 0 0 chrX 65485213 65485259 -101165037 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1084 1206 229 65 11 chrX 65485476 65485754 -101164542 + MERVL_2A-int LTR ERVL 1883 2175 -3586 5 1084 2341 147 35 30 chrX 65485754 65485806 -101164490 + RLTR23 LTR ERV1 1 52 -378 5 1084 2238 76 23 7 chrX 65485806 65486111 -101164185 + L1_Mus2 LINE L1 6248 6557 -9 5 1084 456 19 0 0 chrX 65486111 65486164 -101164132 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 1084 2341 147 35 30 chrX 65486164 65486538 -101163758 + RLTR23 LTR ERV1 53 429 -1 5 1084 496 295 15 8 chrX 65486538 65486668 -101163628 + MERVL_2A-int LTR ERVL 2064 2194 -3520 6 1084 1388 24 0 6 chrX 65486677 65486846 -101163450 + (GAAA)n Simple_repeat Simple_repeat 3 170 0 6 1084 1798 201 21 73 chrX 65486846 65487282 -101163014 - RMER10A LTR ERVL -29 413 1 6 1084 2997 206 12 8 chrX 65487282 65487875 -101162421 + MERVL_2A-int LTR ERVL 2302 2896 -2865 6 1084 468 51 0 0 chrX 65487875 65487934 -101162362 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1084 3019 215 79 34 chrX 65487934 65488670 -101161626 + MERVL_2A-int LTR ERVL 2950 3718 -2043 6 1084 319 362 53 15 chrX 65489383 65489515 -101160781 - B3 SINE B2 -10 206 70 6 1084 181 162 0 29 chrX 65490414 65490484 -101159812 + T-rich Low_complexity Low_complexity 2 69 0 6 1084 665 207 47 85 chrX 65490979 65491190 -101159106 - Lx3C LINE L1 -2 6974 6772 6 1084 2249 127 11 22 chrX 65491187 65491550 -101158746 + Lx3A LINE L1 5593 5951 -1030 6 1084 271 322 108 60 chrX 65491719 65491904 -101158392 - RLTR42-int LTR ERVK -4151 1371 1178 6 1084 3116 55 0 19 chrX 65492031 65492442 -101157854 - L1Md_F2 LINE L1 -3 6579 6177 6 1084 1170 62 0 0 chrX 65494028 65494174 -101156122 + B1_Mus2 SINE Alu 2 147 0 6 1084 26 0 0 0 chrX 65494174 65494200 -101156096 + AT_rich Low_complexity Low_complexity 1 26 0 6 1084 296 247 0 0 chrX 65494982 65495055 -101155241 - Lx9 LINE L1 -31 7613 7541 6 1084 249 119 0 0 chrX 65495061 65495103 -101155193 + (TATG)n Simple_repeat Simple_repeat 2 43 0 6 1084 2367 194 24 67 chrX 65495106 65495642 -101154654 - Lx9 LINE L1 -179 7465 6953 6 1084 550 267 22 29 chrX 65495685 65495824 -101154472 - B3A SINE B2 -60 138 1 6 1084 24 53 0 0 chrX 65496149 65496187 -101154109 + AT_rich Low_complexity Low_complexity 1 38 0 6 1084 332 238 38 0 chrX 65496222 65496302 -101153994 - MLT1A1 LTR MaLR -11 397 315 6 1084 354 278 149 0 chrX 65496480 65496674 -101153622 - L1M3 LINE L1 -1288 4852 4630 6 1084 259 307 115 33 chrX 65496719 65496901 -101153395 - Lx8 LINE L1 -3 7470 7274 6 1084 993 71 0 21 chrX 65497662 65497805 -101152491 - L1Md_T LINE L1 -1 6581 6442 6 1084 1416 194 71 10 chrX 65497968 65498276 -101152020 - Lx9 LINE L1 -292 7352 7026 6 1084 461 240 0 0 chrX 65498278 65498403 -101151893 + Lx9 LINE L1 7513 7637 -7 6 1084 446 254 0 26 chrX 65498778 65498891 -101151405 - MIRc SINE MIR -18 250 141 6 1084 322 283 123 9 chrX 65499046 65499160 -101151136 - MER5B DNA MER1_type 0 178 52 6 1084 257 226 12 23 chrX 65499402 65499488 -101150808 + Lx9 LINE L1 7544 7628 -16 6 1084 671 54 11 0 chrX 65500074 65500166 -101150130 + (TCTA)n Simple_repeat Simple_repeat 1 93 0 1 1084 239 186 14 54 chrX 65500172 65500246 -101150050 + CT-rich Low_complexity Low_complexity 3 73 0 2 1084 195 42 0 0 chrX 65501138 65501162 -101149134 + (TAA)n Simple_repeat Simple_repeat 2 25 0 3 1084 601 287 160 0 chrX 65501797 65502041 -101148255 - B4A SINE B4 -6 286 4 4 1084 533 105 12 0 chrX 65502388 65502474 -101147822 + (TC)n Simple_repeat Simple_repeat 1 87 0 5 1084 225 0 0 0 chrX 65502474 65502499 -101147797 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 1084 6805 129 14 17 chrX 65503374 65504485 -101145811 + Lx2 LINE L1 5882 6989 -8 7 1084 26 0 0 0 chrX 65506441 65506467 -101143829 + AT_rich Low_complexity Low_complexity 1 26 0 8 1084 29707 117 19 7 chrX 65506694 65513009 -101137287 - L1_Mus1 LINE L1 0 6567 177 9 1084 639 308 49 109 chrX 65513436 65513786 -101136510 + MLT1B LTR MaLR 58 386 -4 1 1084 198 0 0 0 chrX 65514112 65514134 -101136162 + (CCA)n Simple_repeat Simple_repeat 3 24 0 1 1084 229 265 254 0 chrX 65515020 65515162 -101135134 + MIRb SINE MIR 2 174 -94 1 1084 240 320 92 10 chrX 65515499 65515597 -101134699 + PB1D9 SINE Alu 15 120 0 1 1084 283 312 0 13 chrX 65516304 65516382 -101133914 - MIR3 SINE MIR -15 193 117 1 1084 35213 47 0 4 chrX 65517071 65522333 -101127963 + L1Md_T LINE L1 253 5588 -298 1 1084 8552 26 0 0 chrX 65522334 65523330 -101126966 + L1Md_T LINE L1 5590 6585 0 1 1084 210 71 0 0 chrX 65523371 65523399 -101126897 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1 1084 308 335 196 16 chrX 65523572 65523766 -101126530 + MIR SINE MIR 21 249 -13 1 1084 1054 61 30 0 chrX 65524061 65524193 -101126103 + B1_Mus1 SINE Alu 1 136 -12 1 1084 1391 29 6 0 chrX 65524193 65524365 -101125931 + (GAAA)n Simple_repeat Simple_repeat 2 174 0 1 1084 36 23 0 0 chrX 65524676 65524719 -101125577 + AT_rich Low_complexity Low_complexity 1 43 0 2 1084 224 318 17 86 chrX 65525076 65525193 -101125103 + L2b LINE L2 3241 3377 -10 2 1084 430 338 116 36 chrX 65525292 65525627 -101124669 - L2a LINE L2 -130 3296 2935 2 1084 319 325 148 0 chrX 65525845 65526048 -101124248 - L2a LINE L2 -757 2662 2430 2 1084 417 339 73 70 chrX 65526123 65526437 -101123859 + MLT1B LTR MaLR 2 316 -74 2 1084 305 376 21 0 chrX 65526731 65526872 -101123424 - L2a LINE L2 -1356 2063 1920 2 1084 2248 157 22 14 chrX 65526877 65527244 -101123052 + ORR1B1 LTR MaLR 16 385 -9 2 1084 285 172 0 0 chrX 65527761 65527825 -101122471 + GA-rich Low_complexity Low_complexity 1 64 0 2 1084 590 325 28 14 chrX 65528394 65528609 -101121687 + Lx8 LINE L1 7113 7330 -143 2 1084 21 36 0 0 chrX 65528651 65528679 -101121617 + AT_rich Low_complexity Low_complexity 1 28 0 2 1084 23 0 0 0 chrX 65529091 65529114 -101121182 + AT_rich Low_complexity Low_complexity 1 23 0 2 1084 1609 168 53 25 chrX 65529395 65529713 -101120583 + ORR1A2 LTR MaLR 1 327 0 2 1084 192 343 14 0 chrX 65530130 65530200 -101120096 - MIRc SINE MIR -166 102 32 3 1084 232 376 37 32 chrX 65530582 65530769 -101119527 - MIR SINE MIR -73 189 2 3 1084 621 121 10 0 chrX 65530815 65530914 -101119382 - Lx3A LINE L1 -214 6767 6668 3 1084 988 126 134 16 chrX 65530912 65531098 -101119198 + Lx3A LINE L1 6774 6981 0 3 1084 375 282 138 82 chrX 65531237 65531456 -101118840 + ORR1E LTR MaLR 4 234 -144 3 1084 3189 102 80 6 chrX 65531901 65532386 -101117910 - L1_Mus3 LINE L1 -2 6636 6116 3 1084 658 256 15 0 chrX 65532425 65532562 -101117734 + B1_Mur4 SINE Alu 11 149 -1 3 1084 1006 116 14 0 chrX 65532617 65532763 -101117533 + B1_Mus1 SINE Alu 1 148 0 3 1084 797 139 0 41 chrX 65532780 65532952 -101117344 + A-rich Low_complexity Low_complexity 3 167 0 3 1084 935 249 25 21 chrX 65533275 65533513 -101116783 - Lx8 LINE L1 -312 7161 6923 3 1084 186 43 0 0 chrX 65534622 65534645 -101115651 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 3 1084 6009 65 0 1 chrX 65534961 65535734 -101114562 - L1_Mus2 LINE L1 -918 5648 4878 4 1084 348 26 0 0 chrX 65535733 65535772 -101114524 + L1Md_F2 LINE L1 5605 5643 -941 4 135 7981 45 3 0 chrX 65535784 65536747 -101113549 + L1Md_F2 LINE L1 5605 6570 -12 4 1085 426 264 132 66 chrX 65537129 65537364 -101112932 + MLT1D LTR MaLR 128 463 -42 4 1085 208 135 0 0 chrX 65539374 65539411 -101110885 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 4 1085 272 262 57 45 chrX 65539977 65540065 -101110231 + PB1D9 SINE Alu 24 112 -8 4 1085 2461 61 0 0 chrX 65540101 65540414 -101109882 + L1_Mus1 LINE L1 6255 6567 0 4 1085 336 200 0 0 chrX 65542489 65542564 -101107732 + (TA)n Simple_repeat Simple_repeat 1 75 0 4 1085 2275 107 3 9 chrX 65542924 65543253 -101107043 - ORR1A2 LTR MaLR 0 327 1 4 1085 284 304 73 65 chrX 65545030 65545095 -101105201 + L1MA6 LINE L1 5960 6028 -272 4 1085 4511 58 19 0 chrX 65545095 65545669 -101104627 + L1_Mus1 LINE L1 5981 6565 -2 4 1085 284 304 73 65 chrX 65545669 65545878 -101104418 + L1MA6 LINE L1 6029 6235 -65 4 1085 227 93 0 23 chrX 65546650 65546694 -101103602 + (TTTTG)n Simple_repeat Simple_repeat 4 46 0 5 1085 364 273 13 0 chrX 65547210 65547287 -101103009 - ID4_ SINE ID 0 83 6 5 1085 1486 322 72 13 chrX 65547829 65548439 -101101857 + Lx7 LINE L1 6692 7337 -359 5 1085 240 387 18 0 chrX 65548536 65548647 -101101649 - MER3 DNA MER1_type -96 113 1 5 1085 7116 94 42 10 chrX 65549218 65550281 -101100015 - Lx3_Mus LINE L1 0 7009 5913 5 1085 182 160 0 20 chrX 65550291 65550342 -101099954 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 5 1085 2624 92 5 8 chrX 65550380 65550763 -101099533 - L1_Mur1 LINE L1 -324 5562 5181 5 1085 6679 65 3 0 chrX 65550782 65551656 -101098640 - L1_Mus4 LINE L1 -837 5799 4923 5 1085 245 118 0 0 chrX 65551651 65551685 -101098611 + L1_Mm LINE L1 5058 5091 -792 5 1085 7620 68 0 11 chrX 65551687 65552681 -101097615 + L1Md_F2 LINE L1 5588 6570 -12 5 1085 238 214 43 0 chrX 65554262 65554332 -101095964 + GA-rich Low_complexity Low_complexity 2 74 0 6 1085 243 222 74 0 chrX 65554509 65554563 -101095733 + MLT1D LTR MaLR 1 58 -447 6 1085 243 0 0 0 chrX 65554582 65554609 -101095687 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1085 555 16 0 0 chrX 65555139 65555203 -101095093 + (TA)n Simple_repeat Simple_repeat 1 64 0 6 1085 317 330 52 9 chrX 65556177 65556293 -101094003 - B1F SINE Alu -11 138 18 6 1085 576 42 0 0 chrX 65556342 65556413 -101093883 + (GAAA)n Simple_repeat Simple_repeat 1 71 0 6 1085 438 20 0 0 chrX 65556519 65556570 -101093726 + (TAA)n Simple_repeat Simple_repeat 3 53 0 6 1085 234 359 21 11 chrX 65556660 65556778 -101093518 - L2c LINE L2 -322 3065 2945 6 1085 1874 192 56 8 chrX 65556833 65557206 -101093090 - Lx6 LINE L1 0 7460 7070 6 1085 468 151 129 0 chrX 65557207 65557300 -101092996 - Lx6 LINE L1 -499 6961 6857 6 1085 353 218 30 91 chrX 65557302 65557534 -101092762 + RMER17D LTR ERVK 297 514 -375 6 1085 2317 240 211 11 chrX 65557563 65558372 -101091924 - RCHARR1 DNA MER1_type -1 973 3 7 1085 539 29 14 0 chrX 65558591 65558660 -101091636 + (TG)n Simple_repeat Simple_repeat 1 70 0 7 1085 24296 152 35 8 chrX 65559021 65564939 -101085357 + Lx LINE L1 565 6646 -8 7 1085 738 167 138 39 chrX 65564953 65565134 -101085162 + Lx LINE L1 6449 6647 -7 7 1085 31 0 0 0 chrX 65565421 65565452 -101084844 + AT_rich Low_complexity Low_complexity 1 31 0 7 1085 993 53 0 29 chrX 65567135 65567272 -101083024 + B1_Mus1 SINE Alu 16 148 0 7 1085 846 87 0 0 chrX 65567390 65567528 -101082768 + (TG)n Simple_repeat Simple_repeat 2 139 0 7 1085 187 319 82 55 chrX 65567810 65567956 -101082340 + MIRc SINE MIR 8 157 -111 7 1085 204 365 82 19 chrX 65568362 65568521 -101081775 + L3 LINE CR1 3787 3955 -534 7 1085 657 0 0 0 chrX 65568972 65569045 -101081251 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 7 1085 661 267 124 27 chrX 65570343 65570674 -101079622 - L1MC LINE L1 -719 5625 5263 8 1085 8854 111 28 24 chrX 65570693 65572267 -101078029 - Lx3C LINE L1 -9 6967 5387 8 1085 40 37 0 0 chrX 65572411 65572465 -101077831 + AT_rich Low_complexity Low_complexity 1 54 0 8 1085 6206 163 43 20 chrX 65574229 65575416 -101074880 - Lx2B LINE L1 -3 6997 5784 8 1085 4462 91 49 2 chrX 65575429 65576067 -101074229 - Lx3_Mus LINE L1 -3 7006 6339 8 1085 2833 148 17 2 chrX 65576067 65576529 -101073767 - L1_Mur1 LINE L1 -67 5819 5351 8 1085 207 301 0 12 chrX 65576846 65576930 -101073366 + (TG)n Simple_repeat Simple_repeat 1 83 0 8 1085 205 179 0 0 chrX 65577005 65577044 -101073252 + T-rich Low_complexity Low_complexity 3 41 0 8 1085 969 207 70 25 chrX 65577248 65577491 -101072805 - RMER15 LTR ERVL -321 254 1 8 1085 7589 146 9 13 chrX 65577634 65578863 -101071433 - Lx4B LINE L1 -75 6983 5760 8 1085 853 295 56 7 chrX 65578941 65579211 -101071085 - Lx8 LINE L1 -27 7446 7164 9 1085 312 244 37 0 chrX 65581146 65581228 -101069068 + Lx7 LINE L1 7284 7368 -328 9 1085 1392 216 60 52 chrX 65581238 65581605 -101068691 + Lx7 LINE L1 7327 7696 0 9 1085 23 0 0 0 chrX 65581608 65581631 -101068665 + AT_rich Low_complexity Low_complexity 1 23 0 9 1085 457 267 87 45 chrX 65581656 65581966 -101068330 + L1M3 LINE L1 5047 5369 -771 9 1085 992 230 8 4 chrX 65581971 65582207 -101068089 - Lx2 LINE L1 -774 6223 5987 9 1085 1538 308 30 37 chrX 65582271 65582811 -101067485 + MTE-int LTR MaLR 2 537 -1043 9 1085 247 49 49 0 chrX 65582839 65582880 -101067416 + (TA)n Simple_repeat Simple_repeat 2 44 0 9 1085 1121 63 7 0 chrX 65582881 65583023 -101067273 - B1_Mus2 SINE Alu -4 143 1 9 1085 2048 98 75 0 chrX 65583055 65583373 -101066923 - Lx LINE L1 -8 6646 6305 9 1085 1027 117 0 0 chrX 65583373 65583536 -101066760 + L1_Mur1 LINE L1 3588 3750 -2136 1 1085 317 297 0 0 chrX 65583536 65583610 -101066686 + MTE-int LTR MaLR 548 621 -959 9 1085 272 304 0 0 chrX 65583638 65583707 -101066589 + MTEb LTR MaLR 31 99 -280 1 1085 1190 68 0 0 chrX 65584403 65584551 -101065745 + B1_Mus1 SINE Alu 1 148 0 1 1085 884 134 30 12 chrX 65584696 65584828 -101065468 - ORR1A2 LTR MaLR -169 158 42 1 1085 275 288 12 48 chrX 65584828 65584912 -101065384 + ID4 SINE ID 2 82 -1 1 1085 22 35 0 0 chrX 65585013 65585042 -101065254 + AT_rich Low_complexity Low_complexity 1 29 0 1 1085 1697 185 198 11 chrX 65585249 65585803 -101064493 + RLTR17 LTR ERVK 1 658 -34 1 1085 806 39 10 0 chrX 65585733 65585837 -101064459 + B1_Mus2 SINE Alu 43 147 0 1 1085 189 94 0 0 chrX 65585837 65585869 -101064427 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 1 1085 476 237 17 26 chrX 65585869 65585986 -101064310 + RLTR17 LTR ERVK 577 692 0 1 1085 236 404 65 51 chrX 65586083 65586297 -101063999 - MLT1J2 LTR MaLR -138 310 94 1 1085 1570 281 111 28 chrX 65586475 65587148 -101063148 + Lx8 LINE L1 6236 6964 -509 1 1085 264 30 0 0 chrX 65587153 65587186 -101063110 + (CCA)n Simple_repeat Simple_repeat 3 35 0 1 1085 913 307 72 39 chrX 65587202 65587565 -101062731 + Lx8 LINE L1 6951 7325 -148 1 1085 1172 161 16 0 chrX 65587567 65587760 -101062536 - RMER15 LTR ERVL 0 575 380 1 1085 983 235 36 18 chrX 65587766 65587991 -101062305 - RMER15 LTR ERVL -341 234 6 1 1085 367 218 151 43 chrX 65587993 65588132 -101062164 + Lx8 LINE L1 7320 7473 0 1 1085 1041 85 7 0 chrX 65589143 65589284 -101061012 - B1_Mm SINE Alu -5 142 1 1 1085 337 318 9 0 chrX 65589522 65589629 -101060667 + PB1D10 SINE Alu 4 111 -6 1 1085 11067 161 26 11 chrX 65589869 65592673 -101057623 - Lx5 LINE L1 -7 7043 4184 1 1085 35304 36 0 0 chrX 65592674 65598114 -101052182 + L1Md_T LINE L1 53 5589 -297 1 1085 9005 4 0 0 chrX 65598114 65599110 -101051186 + L1Md_T LINE L1 5590 6585 0 1 1085 1101 135 0 6 chrX 65599110 65599289 -101051007 - Lx5 LINE L1 -1679 4198 4021 1 1085 301 263 53 0 chrX 65599276 65599390 -101050906 + L1MB7 LINE L1 6044 6163 -21 1 1085 209 176 0 0 chrX 65600465 65600499 -101049797 - L2a LINE L2 -11 3415 3382 1 1085 23 0 0 0 chrX 65600795 65600818 -101049478 + AT_rich Low_complexity Low_complexity 1 23 0 1 1085 980 52 7 0 chrX 65601002 65601137 -101049159 + (TAGA)n Simple_repeat Simple_repeat 1 136 0 1 1085 678 273 72 47 chrX 65601473 65601563 -101048733 - B4A SINE B4 -8 284 191 1 1085 180 0 0 0 chrX 65601563 65601583 -101048713 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1085 678 273 72 47 chrX 65601583 65601769 -101048527 - B4A SINE B4 -102 190 3 1 1085 378 364 76 42 chrX 65601830 65601985 -101048311 + B4A SINE B4 47 211 -81 1 1085 5181 75 14 6 chrX 65601985 65602694 -101047602 + L1_Mus3 LINE L1 5915 6629 -9 1 1085 378 364 76 42 chrX 65602694 65602776 -101047520 + B4A SINE B4 212 292 0 1 1085 288 154 0 0 chrX 65602789 65602841 -101047455 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1085 432 0 0 0 chrX 65603846 65603894 -101046402 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1085 781 255 56 25 chrX 65604188 65604385 -101045911 - Lx6 LINE L1 -611 6849 6647 1 1085 1274 259 220 27 chrX 65604385 65604826 -101045470 + Lx6 LINE L1 6935 7460 0 1 1085 235 336 8 23 chrX 65605279 65605410 -101044886 + L1MA4A LINE L1 4903 5031 -1109 1 1085 21 0 0 0 chrX 65605717 65605738 -101044558 + AT_rich Low_complexity Low_complexity 1 21 0 1 1085 341 272 196 33 chrX 65605740 65606010 -101044286 + MER33 DNA MER1_type 1 314 -10 1 1085 375 220 150 45 chrX 65606057 65606201 -101044095 + L1M5 LINE L1 5511 5671 -453 1 1085 25 31 0 0 chrX 65606429 65606461 -101043835 + AT_rich Low_complexity Low_complexity 1 32 0 1 1085 33 25 0 0 chrX 65606498 65606538 -101043758 + AT_rich Low_complexity Low_complexity 1 40 0 1 1085 1092 83 0 0 chrX 65606835 65606979 -101043317 + B2_Mm2 SINE B2 2 145 -50 1 1085 609 14 0 0 chrX 65606979 65607049 -101043247 + (TG)n Simple_repeat Simple_repeat 2 71 0 1 1085 244 250 0 0 chrX 65607351 65607411 -101042885 + L1MA4A LINE L1 5382 5441 -850 1 1085 7958 6 0 0 chrX 65607410 65608318 -101041978 - L1Md_A LINE L1 -1243 4640 3733 1 1085 8364 3 0 1 chrX 65608317 65609256 -101041040 + L1Md_A LINE L1 4649 5586 -297 1 1085 9034 2 0 0 chrX 65609256 65610252 -101040044 + L1Md_A LINE L1 5587 6582 0 1 1085 606 267 58 0 chrX 65610254 65610426 -101039870 + L1MA4A LINE L1 5428 5609 -691 1 1085 1158 54 0 0 chrX 65610426 65610573 -101039723 + B1_Mm SINE Alu 1 147 0 1 1085 553 280 75 138 chrX 65610573 65610827 -101039469 + L1MA4A LINE L1 5594 5827 -476 1 1085 34 24 0 0 chrX 65610946 65610987 -101039309 + AT_rich Low_complexity Low_complexity 1 41 0 1 1085 2092 262 92 79 chrX 65611503 65612312 -101037984 + Lx8 LINE L1 6651 7469 -4 1 1085 522 262 60 65 chrX 65612501 65612675 -101037621 - RLTR23 LTR ERV1 -2 428 249 1 1085 4105 110 8 13 chrX 65612675 65613292 -101037004 - L1_Mus4 LINE L1 -5 6631 6018 1 1085 522 262 60 65 chrX 65613292 65613333 -101036963 - RLTR23 LTR ERV1 -182 248 214 1 1085 2906 71 0 0 chrX 65613333 65613729 -101036567 + L1_Mus4 LINE L1 5639 6034 -602 1 1085 484 231 9 9 chrX 65613906 65614011 -101036285 - RLTR23 LTR ERV1 -318 112 8 1 1085 488 336 142 50 chrX 65614666 65615249 -101035047 + L1M5 LINE L1 4630 5266 -880 1 1085 846 153 82 6 chrX 65615521 65615679 -101034617 + Lx9 LINE L1 6940 7109 -535 1 1085 770 251 35 13 chrX 65616054 65616280 -101034016 + Lx9 LINE L1 7100 7330 -314 1 1085 1119 89 0 0 chrX 65616433 65616590 -101033706 + (GA)n Simple_repeat Simple_repeat 2 158 0 1 1085 489 163 0 0 chrX 65616595 65616730 -101033566 + (CAGAGA)n Simple_repeat Simple_repeat 3 137 0 1 1085 304 225 113 0 chrX 65616738 65616809 -101033487 - RSINE1 SINE B4 -85 80 2 1 1085 1044 192 126 7 chrX 65616821 65617115 -101033181 + Lx9 LINE L1 7315 7643 -1 1 1085 1327 76 21 26 chrX 65617305 65617465 -101032831 + B2_Mm1a SINE B2 1 160 -33 1 1085 387 0 0 0 chrX 65617465 65617508 -101032788 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 1 1085 1327 76 21 26 chrX 65617508 65617536 -101032760 + B2_Mm1a SINE B2 161 188 -5 1 1085 1335 235 88 0 chrX 65617538 65617900 -101032396 - RCHARR1 DNA MER1_type -48 926 533 1 1085 4041 62 0 4 chrX 65618181 65618699 -101031597 - L1_Mus1 LINE L1 -1 6566 6051 1 1085 4772 97 0 16 chrX 65618699 65619455 -101030841 + L1_Mm LINE L1 3249 3992 -1891 1 1085 5818 92 1 1 chrX 65619849 65620668 -101029628 + L1Md_F2 LINE L1 238 1056 -5560 1 1085 21262 5 0 0 chrX 65620663 65623173 -101027123 + L1Md_A LINE L1 3077 5586 -297 1 1085 9044 3 0 0 chrX 65623173 65624168 -101026128 + L1Md_A LINE L1 5587 6581 -1 1 1085 30629 79 1 2 chrX 65624248 65628791 -101021505 + L1Md_F2 LINE L1 1049 5586 -297 1 1085 7762 60 0 2 chrX 65628791 65629777 -101020519 + L1Md_F2 LINE L1 5587 6570 -12 1 1085 5640 65 7 0 chrX 65629778 65630862 -101019434 + L1Md_F2 LINE L1 5243 6337 -245 1 1085 561 30 0 0 chrX 65630862 65630929 -101019367 + (TA)n Simple_repeat Simple_repeat 1 67 0 1 1085 790 271 193 21 chrX 65630931 65631345 -101018951 - RCHARR1 DNA MER1_type -486 488 3 1 1085 373 298 84 70 chrX 65631354 65631567 -101018729 - LTR53 LTR ERVL -295 224 9 1 1085 1213 112 16 11 chrX 65631671 65631860 -101018436 - B2_Mm2 SINE B2 -5 190 1 1 1085 241 256 69 109 chrX 65632459 65632560 -101017736 + MLT1D LTR MaLR 231 327 -178 1 1085 280 300 0 0 chrX 65632648 65632718 -101017578 + RMER30 DNA MER1_type 133 202 0 1 1085 227 242 312 8 chrX 65632725 65632850 -101017446 + MLT1D LTR MaLR 343 505 0 1 1085 570 265 9 61 chrX 65633352 65633581 -101016715 - Lx8 LINE L1 -1477 5996 5780 1 1085 306 0 0 0 chrX 65633588 65633622 -101016674 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 1 1085 9794 93 21 17 chrX 65633622 65636167 -101014129 - Lx3_Mus LINE L1 -24 6985 4424 1 1085 470 247 40 27 chrX 65636165 65636315 -101013981 - Lx7 LINE L1 -1907 5789 5638 1 1085 882 179 19 45 chrX 65636327 65636610 -101013686 - RMER6A LTR ERVK -484 272 144 1 1085 1856 76 4 0 chrX 65636610 65636872 -101013424 - L1_Mm LINE L1 -511 5372 5110 1 1085 873 106 14 47 chrX 65636872 65637020 -101013276 - RMER6A LTR ERVK -613 143 1 1 1085 420 256 64 23 chrX 65637025 65637197 -101013099 - Lx7 LINE L1 -257 5623 5445 1 1085 616 177 182 0 chrX 65637211 65637392 -101012904 + Lx9 LINE L1 7424 7637 -7 1 1085 25 0 0 0 chrX 65637412 65637437 -101012859 + AT_rich Low_complexity Low_complexity 1 25 0 1 1085 373 245 48 10 chrX 65637453 65637556 -101012740 + MTD LTR MaLR 205 311 -108 1 1085 230 255 154 45 chrX 65637499 65637655 -101012641 + MLT2C1 LTR ERVL 391 563 0 1 1085 21 57 0 0 chrX 65637725 65637760 -101012536 + AT_rich Low_complexity Low_complexity 1 35 0 1 1085 780 230 5 70 chrX 65637795 65637854 -101012442 - B3 SINE B2 -25 191 138 1 1085 2118 148 32 74 chrX 65637854 65638261 -101012035 - ORR1B1 LTR MaLR 0 394 5 1 1085 780 230 5 70 chrX 65638261 65638388 -101011908 - B3 SINE B2 -79 137 17 1 1085 4184 92 7 0 chrX 65638420 65639039 -101011257 + L1Md_F2 LINE L1 4870 5492 -391 1 1085 3037 67 2 0 chrX 65639099 65639517 -101010779 - L1_Mm LINE L1 -1787 4096 3678 1 1085 415 73 0 0 chrX 65639515 65639570 -101010726 + L1Md_F2 LINE L1 5532 5586 -297 1 1085 7559 62 10 12 chrX 65639570 65640558 -101009738 + L1Md_F2 LINE L1 5587 6572 -10 1 1085 658 367 50 27 chrX 65640640 65641018 -101009278 - LTR16B LTR ERVL -59 421 49 1 1085 2878 201 34 22 chrX 65641252 65641935 -101008361 - Lx2B LINE L1 -5 6995 6305 1 1085 238 208 83 83 chrX 65641979 65642063 -101008233 + Charlie11 DNA MER1_type 490 573 -1623 1 1085 306 0 0 0 chrX 65642273 65642307 -101007989 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 1085 1382 53 0 0 chrX 65642307 65642477 -101007819 - MTB LTR MaLR -3 397 228 1 1085 5216 183 71 18 chrX 65642761 65643886 -101006410 - Lx5 LINE L1 0 7050 5866 1 1085 8395 168 43 133 chrX 65643882 65645238 -101005058 - L1_Mur2 LINE L1 -2209 3668 2347 1 1085 306 289 0 0 chrX 65645238 65645321 -101004975 - BGLII_B LTR ERVK -12 429 347 1 1085 8395 168 43 133 chrX 65645321 65645346 -101004950 - L1_Mur2 LINE L1 -2209 2346 2321 1 1085 531 0 0 0 chrX 65645346 65645405 -101004891 + (TCC)n Simple_repeat Simple_repeat 2 60 0 1 1085 531 0 0 0 chrX 65645410 65645469 -101004827 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 1085 422 192 144 50 chrX 65645473 65645631 -101004665 - BGLII_A LTR ERVK -245 196 6 1 1085 8395 168 43 133 chrX 65645631 65645902 -101004394 - L1_Mur2 LINE L1 -3557 2316 2035 1 1085 504 0 0 0 chrX 65645902 65645958 -101004338 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1085 8395 168 43 133 chrX 65645958 65646658 -101003638 - L1_Mur2 LINE L1 -3843 2034 1299 1 1085 210 128 0 0 chrX 65646660 65646699 -101003597 + (T)n Simple_repeat Simple_repeat 1 39 0 1 1085 1148 55 7 0 chrX 65646701 65646847 -101003449 - B1_Mm SINE Alu 0 147 1 1 1085 1093 217 25 3 chrX 65646847 65647199 -101003097 - L1_Mur2 LINE L1 -6402 1326 896 1 1085 30 27 0 0 chrX 65647898 65647935 -101002361 + AT_rich Low_complexity Low_complexity 1 37 0 1 1085 195 146 0 0 chrX 65647983 65648024 -101002272 + (TC)n Simple_repeat Simple_repeat 1 41 0 1 1085 1536 255 55 28 chrX 65648024 65648405 -101001891 - Lx9 LINE L1 -37 7607 7226 1 1085 414 0 0 0 chrX 65648405 65648451 -101001845 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 1 1085 1536 279 59 26 chrX 65648451 65648648 -101001648 - Lx9 LINE L1 -419 7225 6884 1 1085 24 32 0 0 chrX 65649002 65649033 -101001263 + AT_rich Low_complexity Low_complexity 1 31 0 1 1085 219 189 0 0 chrX 65650185 65650222 -101000074 - L2 LINE L2 -783 2636 2600 1 1085 275 30 0 0 chrX 65650245 65650278 -101000018 + B1_Mm SINE Alu 107 139 -8 1 1085 193 29 59 0 chrX 65650278 65650312 -100999984 + (CAA)n Simple_repeat Simple_repeat 2 37 0 1 1085 629 354 36 69 chrX 65650505 65650599 -100999697 - MTE2b LTR MaLR 0 379 1 1 1085 840 336 10 30 chrX 65650599 65650897 -100999399 - MT2A LTR ERVL -241 292 1 2 1085 298 332 167 30 chrX 65650898 65651324 -100998972 - L2 LINE L2 -1094 2325 1842 1 1085 278 194 31 31 chrX 65651365 65651429 -100998867 - RLTR17 LTR ERVK -85 607 544 2 1085 3386 28 104 2 chrX 65651447 65651878 -100998418 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1085 3402 78 11 26 chrX 65651879 65652709 -100997587 + IAPEz-int LTR ERVK 9 662 -5819 2 1085 2564 64 0 3 chrX 65652709 65653052 -100997244 + IAPEz-int LTR ERVK 1359 1700 -4781 2 1085 6515 48 4 0 chrX 65653045 65653871 -100996425 + IAPEz-int LTR ERVK 5651 6479 -2 2 1085 3148 31 53 20 chrX 65653873 65654271 -100996025 + IAPLTR2_Mm LTR ERVK 1 411 0 2 1085 1563 247 82 30 chrX 65654271 65654746 -100995550 - RLTR17 LTR ERVK -192 500 1 2 1085 441 263 11 0 chrX 65654833 65654928 -100995368 - MER58B DNA MER1_type -2 339 244 2 1085 4621 127 24 1 chrX 65655675 65656974 -100993322 + L1Md_F LINE L1 392 1722 -4161 2 1085 17889 117 76 7 chrX 65656969 65662013 -100988283 + L1_Mus1 LINE L1 625 6557 -10 2 1085 855 78 0 0 chrX 65662015 65662131 -100988165 + (GA)n Simple_repeat Simple_repeat 2 117 0 2 1085 5002 185 70 6 chrX 65662389 65664180 -100986116 + Lx3C LINE L1 5012 6939 -37 2 1085 40 49 0 0 chrX 65664192 65664253 -100986043 + AT_rich Low_complexity Low_complexity 1 61 0 2 1085 456 35 0 0 chrX 65664714 65664772 -100985524 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 1085 528 146 0 0 chrX 65664971 65665060 -100985236 + (CA)n Simple_repeat Simple_repeat 2 90 0 2 1085 237 132 0 0 chrX 65665059 65665097 -100985199 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 1085 279 239 164 26 chrX 65665112 65665228 -100985068 + MLT1E2 LTR MaLR 54 185 -442 2 1085 317 291 75 95 chrX 65665239 65665425 -100984871 + MLT1E2 LTR MaLR 256 506 -121 2 1085 1405 33 0 16 chrX 65665500 65665684 -100984612 + L1Md_F2 LINE L1 6402 6582 0 2 1085 1010 181 68 61 chrX 65665684 65666015 -100984281 - RLTR1B LTR ERV1 -299 325 1 2 1085 1233 42 24 0 chrX 65666015 65666183 -100984113 - L1_Mus4 LINE L1 -755 5881 5710 2 1085 22 0 0 0 chrX 65666195 65666217 -100984079 + AT_rich Low_complexity Low_complexity 1 22 0 2 1085 492 163 61 23 chrX 65666221 65666353 -100983943 - Lx3A LINE L1 -4 6977 6841 2 1085 3062 45 53 0 chrX 65666641 65667017 -100983279 + MTA_Mm LTR MaLR 1 396 0 2 1086 719 288 22 31 chrX 65667392 65667576 -100982720 + MTD LTR MaLR 10 191 -228 2 1086 1496 216 42 13 chrX 65667576 65667914 -100982382 + RMER12 LTR ERVK 1 335 -1513 2 1086 7255 97 26 15 chrX 65667993 65669162 -100981134 - MusHAL1 LINE L1 -4 2708 1528 2 1086 6440 81 56 0 chrX 65669170 65670112 -100980184 - L1_Mus3 LINE L1 -3 6635 5641 2 1086 587 220 66 167 chrX 65670225 65670482 -100979814 + RMER12 LTR ERVK 988 1218 -104 2 1086 363 229 78 7 chrX 65670556 65670707 -100979589 + MTD LTR MaLR 196 384 -35 2 1086 1460 302 72 31 chrX 65670879 65671582 -100978714 - Lx8 LINE L1 -303 7170 6439 2 1086 807 268 154 48 chrX 65671584 65671810 -100978486 + L1_Rod LINE L1 4455 4708 -1139 2 1086 4481 60 2 19 chrX 65671810 65672387 -100977909 + L1_Mus2 LINE L1 6000 6566 0 2 1086 807 268 154 48 chrX 65672387 65672763 -100977533 + L1_Rod LINE L1 4709 5121 -726 2 1086 250 236 27 40 chrX 65672768 65672843 -100977453 + ORR1D1 LTR MaLR 301 374 0 2 1086 578 333 0 11 chrX 65673173 65673358 -100976938 + Lx8 LINE L1 6227 6409 -1064 2 1086 454 66 0 0 chrX 65673497 65673558 -100976738 + L1_Mus2 LINE L1 6102 6162 -404 2 1086 210 286 18 0 chrX 65673563 65673619 -100976677 + L2a LINE L2 3365 3421 -5 2 1086 192 365 52 0 chrX 65673618 65673733 -100976563 - MIR3 SINE MIR -41 167 47 2 1086 311 274 34 50 chrX 65673956 65674075 -100976221 + MLT1A1 LTR MaLR 13 129 -279 2 1086 421 314 29 34 chrX 65674456 65674631 -100975665 + RMER15 LTR ERVL 348 521 -54 2 1086 189 0 0 0 chrX 65674914 65674935 -100975361 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1086 321 26 0 0 chrX 65676543 65676581 -100973715 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1086 311 332 168 13 chrX 65676687 65676919 -100973377 + L2a LINE L2 2789 3056 -363 2 1086 385 334 55 79 chrX 65676961 65677211 -100973085 - MER68 LTR ERVL -21 542 289 2 1086 1486 248 44 15 chrX 65677211 65677616 -100972680 + MTD LTR MaLR 2 418 -1 2 1086 385 334 55 79 chrX 65677616 65677745 -100972551 - MER68 LTR ERVL -275 288 172 2 1086 193 0 61 30 chrX 65678121 65678154 -100972142 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 2 1086 276 384 28 81 chrX 65678196 65678556 -100971740 + L2a LINE L2 3069 3409 -17 2 1086 237 199 19 4 chrX 65678577 65678644 -100971652 - MIR SINE MIR -94 174 104 2 1086 189 94 0 0 chrX 65678971 65679003 -100971293 + (TTAA)n Simple_repeat Simple_repeat 3 34 0 2 1086 2026 150 48 16 chrX 65679024 65679397 -100970899 - Lx4A LINE L1 -77 6981 6597 2 1086 4215 147 9 51 chrX 65679401 65680264 -100970032 + L1Md_A LINE L1 446 1272 -5452 2 1086 33588 62 30 8 chrX 65680261 65685007 -100965289 + L1Md_A LINE L1 98 4951 -932 2 1086 3648 39 0 0 chrX 65685007 65685440 -100964856 - L1Md_T LINE L1 0 6582 6150 2 1086 33588 41 1 4 chrX 65685440 65686075 -100964221 + L1Md_A LINE L1 4952 5586 -297 2 1086 8006 33 23 4 chrX 65686075 65687039 -100963257 + L1Md_A LINE L1 5588 6569 -13 2 1086 28 0 0 0 chrX 65687039 65687067 -100963229 + AT_rich Low_complexity Low_complexity 1 28 0 2 1086 3180 57 0 0 chrX 65687067 65687521 -100962775 + L1_Mm LINE L1 1257 1710 -4173 2 1086 2370 55 19 0 chrX 65687521 65687831 -100962465 + L1Md_F3 LINE L1 6268 6583 -1 2 1086 1911 112 41 6 chrX 65687995 65688311 -100961985 - Lx4A LINE L1 -451 6607 6281 2 1086 5518 94 4 5 chrX 65688818 65689587 -100960709 - L1_Mus3 LINE L1 -5 6633 5866 2 1086 2540 160 9 13 chrX 65689595 65690052 -100960244 - Lx LINE L1 -4 6650 6196 2 1086 411 280 101 32 chrX 65690053 65690271 -100960025 + Lx8 LINE L1 7233 7465 -8 2 1086 208 330 37 37 chrX 65690681 65690788 -100959508 + MIRc SINE MIR 94 200 -68 2 1086 354 123 0 0 chrX 65691890 65691947 -100958349 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1086 191 217 0 16 chrX 65691956 65692017 -100958279 + CT-rich Low_complexity Low_complexity 3 62 0 2 1086 535 339 11 54 chrX 65692460 65692644 -100957652 + B3 SINE B2 4 179 -37 2 1086 21 82 0 0 chrX 65692753 65692802 -100957494 + AT_rich Low_complexity Low_complexity 1 49 0 2 1086 5567 19 0 0 chrX 65693341 65693975 -100956321 + L1Md_A LINE L1 5949 6582 0 2 1086 235 282 25 13 chrX 65694129 65694208 -100956088 - ID4 SINE ID -2 81 2 2 1086 22 35 0 0 chrX 65694248 65694277 -100956019 + AT_rich Low_complexity Low_complexity 1 29 0 2 1086 287 162 50 0 chrX 65694664 65694744 -100955552 + (TA)n Simple_repeat Simple_repeat 1 84 0 2 1086 198 0 0 0 chrX 65694890 65694912 -100955384 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 1086 313 275 39 74 chrX 65694912 65695215 -100955081 - L1MA8 LINE L1 -74 6217 5926 2 1086 335 279 134 37 chrX 65695216 65695380 -100954916 + MTD LTR MaLR 227 406 -13 2 1086 1019 234 62 105 chrX 65695494 65695649 -100954647 + ORR1D2 LTR MaLR 1 161 -209 2 1086 2729 55 23 0 chrX 65695649 65695995 -100954301 - L1_Mus1 LINE L1 0 6567 6214 2 1086 1019 234 62 105 chrX 65695995 65696164 -100954132 + ORR1D2 LTR MaLR 162 311 -59 2 1086 566 273 245 30 chrX 65696249 65696543 -100953753 - MTEb LTR MaLR 0 379 22 2 1086 239 267 126 55 chrX 65696762 65696889 -100953407 + ORR1D1 LTR MaLR 6 141 -233 2 1086 19626 131 4 79 chrX 65697227 65704371 -100945925 - L1Md_F3 LINE L1 -14 6570 446 2 1086 2402 136 52 16 chrX 65704612 65705038 -100945258 - BGLII_B LTR ERVK 0 441 1 2 1086 1846 187 58 36 chrX 65705038 65705505 -100944791 + Lx2B LINE L1 6524 7000 0 2 1086 203 177 0 16 chrX 65705614 65705677 -100944619 + (TTTA)n Simple_repeat Simple_repeat 2 63 0 2 1086 1087 182 107 26 chrX 65705771 65706041 -100944255 + Lx4B LINE L1 6757 7048 -10 2 1086 355 321 71 27 chrX 65706047 65706159 -100944137 - RSINE1 SINE B4 -38 127 11 2 1086 725 305 54 11 chrX 65706595 65706966 -100943330 + L1MA4A LINE L1 5546 5932 -371 2 1086 213 264 0 70 chrX 65707173 65707230 -100943066 + ID4 SINE ID 6 58 -25 2 1086 423 0 0 0 chrX 65707248 65707295 -100943001 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1086 2228 268 50 14 chrX 65707690 65708432 -100941864 - Lx7 LINE L1 -1341 6355 5587 2 1086 2873 286 49 14 chrX 65708433 65709372 -100940924 + Lx7 LINE L1 6360 7331 -365 2 1086 24 0 0 0 chrX 65709540 65709564 -100940732 + AT_rich Low_complexity Low_complexity 1 24 0 2 1086 2704 180 26 6 chrX 65709672 65710202 -100940094 - Lx2B LINE L1 -292 6708 6168 2 1086 991 266 6 55 chrX 65710182 65710508 -100939788 + Lx2B LINE L1 6684 6993 -7 2 1086 30630 77 5 1 chrX 65710533 65715870 -100934426 + L1Md_F2 LINE L1 230 5586 -297 2 1086 7970 42 14 2 chrX 65715870 65716850 -100933446 + L1Md_F2 LINE L1 5587 6578 -4 2 1086 261 317 7 111 chrX 65717543 65717678 -100932618 + L2c LINE L2 2769 2889 -530 2 1086 2346 189 42 2 chrX 65717768 65718241 -100932055 + Lx3C LINE L1 6483 6974 -2 2 1086 346 337 112 63 chrX 65718243 65718648 -100931648 + L2c LINE L2 3001 3426 0 2 1086 198 339 18 9 chrX 65719204 65719317 -100930979 + MIRb SINE MIR 138 251 -17 2 1086 22 0 0 0 chrX 65719325 65719347 -100930949 + AT_rich Low_complexity Low_complexity 1 22 0 2 1086 195 324 42 0 chrX 65719397 65719468 -100930828 + MIRb SINE MIR 195 268 0 2 1086 307 325 74 37 chrX 65719627 65719828 -100930468 + MTEa LTR MaLR 141 364 -15 2 1086 1975 165 8 74 chrX 65720304 65720683 -100929613 - ORR1B1 LTR MaLR 0 394 41 2 1086 905 45 0 0 chrX 65721978 65722090 -100928206 + B1_Mm SINE Alu 25 136 -11 2 1086 495 0 0 0 chrX 65722090 65722145 -100928151 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 2 1086 1187 225 17 57 chrX 65722399 65722730 -100927566 - Lx7 LINE L1 0 7696 7379 2 1086 420 20 0 0 chrX 65722730 65722779 -100927517 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1086 1187 225 17 57 chrX 65722779 65722800 -100927496 - Lx7 LINE L1 -318 7378 7358 2 1086 397 252 8 32 chrX 65722857 65722980 -100927316 - Lx7 LINE L1 -329 7367 7248 2 1086 1066 164 14 0 chrX 65722978 65723185 -100927111 + L1_Mur2 LINE L1 3791 4000 -1877 2 1086 2795 139 76 8 chrX 65723186 65723672 -100926624 + Lx2 LINE L1 6479 6997 0 2 1086 1981 213 94 25 chrX 65725796 65726313 -100923983 - RMER19C LTR ERVK 0 611 1 2 1086 1879 223 49 137 chrX 65726345 65726952 -100923344 - RMER19C LTR ERVK 0 611 58 2 1086 32881 71 4 4 chrX 65726953 65731903 -100918393 + L1Md_F3 LINE L1 633 5586 -297 2 1086 7968 38 25 1 chrX 65731903 65732878 -100917418 + L1Md_F3 LINE L1 5587 6584 0 2 1086 431 90 14 29 chrX 65732879 65732948 -100917348 - RMER19C LTR ERVK -542 69 2 2 1086 5998 79 28 8 chrX 65733119 65733953 -100916343 + L1_Mus3 LINE L1 5784 6633 -5 2 1086 229 274 0 16 chrX 65735559 65735622 -100914674 + L1MA10 LINE L1 6197 6258 -76 2 1086 405 230 192 12 chrX 65736230 65736397 -100913899 - MIRb SINE MIR -39 229 33 2 1086 525 32 0 0 chrX 65736417 65736480 -100913816 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1086 201 135 0 55 chrX 65737431 65737486 -100912810 + (TGG)n Simple_repeat Simple_repeat 3 54 0 3 1086 358 315 165 68 chrX 65737614 65738009 -100912287 + MLT1H1 LTR MaLR 1 433 -122 3 1086 217 158 17 34 chrX 65738241 65738300 -100911996 + CT-rich Low_complexity Low_complexity 4 61 0 3 1086 697 55 76 0 chrX 65738292 65738437 -100911859 + (TCC)n Simple_repeat Simple_repeat 2 157 0 3 1086 495 0 0 0 chrX 65738433 65738488 -100911808 + (TC)n Simple_repeat Simple_repeat 2 56 0 3 1086 515 308 0 0 chrX 65738523 65738653 -100911643 - B1F SINE Alu -19 130 1 3 1086 309 367 106 28 chrX 65739059 65739381 -100910915 - L2 LINE L2 -372 3047 2701 3 1086 301 316 50 28 chrX 65739900 65740079 -100910217 + Lx8 LINE L1 7057 7239 -234 3 1086 1164 57 0 0 chrX 65740359 65740499 -100909797 + B1_Mm SINE Alu 3 142 -5 3 1086 3245 38 2 8 chrX 65741179 65741575 -100908721 + MTA_Mm LTR MaLR 1 394 -2 3 1086 203 298 0 0 chrX 65742467 65742524 -100907772 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 1086 1229 288 68 20 chrX 65742740 65743140 -100907156 + MTD LTR MaLR 1 419 0 3 1086 5226 127 47 1 chrX 65743431 65744412 -100905884 - Lx2 LINE L1 -576 6421 5375 3 1086 547 110 154 0 chrX 65744415 65744506 -100905790 + ORR1B1 LTR MaLR 278 382 -12 3 1086 572 289 131 21 chrX 65744665 65744902 -100905394 + RMER15 LTR ERVL 311 573 -2 3 1086 910 302 139 3 chrX 65744907 65745230 -100905066 + Lx8 LINE L1 6530 6881 -592 3 1086 1823 75 4 12 chrX 65745254 65745511 -100904785 + RLTR9D LTR ERVK 1 255 -148 3 1086 445 366 83 34 chrX 65745533 65746065 -100904231 + Lx8 LINE L1 6908 7465 -8 3 1086 257 302 128 8 chrX 65746229 65746346 -100903950 + Lx8 LINE L1 6907 7037 -436 3 1086 1365 230 41 3 chrX 65746589 65746881 -100903415 + Lx6 LINE L1 7158 7460 0 3 1086 213 39 0 0 chrX 65746967 65746993 -100903303 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 1086 405 313 8 50 chrX 65747466 65747587 -100902709 + PB1D10 SINE Alu 2 117 0 3 1086 1118 164 87 0 chrX 65747785 65747992 -100902304 + URR1A DNA MER1_type 2 226 0 3 1086 384 311 42 0 chrX 65748111 65748230 -100902066 - MER3 DNA MER1_type -60 149 26 3 1086 279 293 113 65 chrX 65748242 65748410 -100901886 + MIRb SINE MIR 63 238 -30 3 1086 254 310 158 7 chrX 65749178 65749324 -100900972 + L2 LINE L2 1931 2098 -1321 3 1086 1088 99 0 0 chrX 65749339 65749490 -100900806 + L1_Mus1 LINE L1 6411 6561 -6 3 1086 462 353 72 10 chrX 65749943 65750152 -100900144 + MER46C DNA MER2_type 95 316 -22 3 1086 2365 148 118 59 chrX 65750830 65751356 -100898940 + RLTR31B_Mm LTR ERVK 1 557 0 3 1086 4311 210 50 93 chrX 65751393 65752624 -100897672 + Lx9 LINE L1 6464 7642 -2 3 1086 1303 285 107 58 chrX 65752646 65753256 -100897040 + BLACKJACK DNA AcHobo 937 1601 -1343 3 1086 570 265 21 27 chrX 65753256 65753442 -100896854 - B3A SINE B2 -12 186 2 3 1086 1303 285 107 58 chrX 65753442 65753819 -100896477 + BLACKJACK DNA AcHobo 1602 1973 -971 3 1086 6379 137 56 18 chrX 65753854 65754987 -100895309 - Lx2B LINE L1 -15 6985 5810 3 1086 608 283 85 10 chrX 65755077 65755277 -100895019 + B3 SINE B2 2 216 0 3 1086 530 261 128 52 chrX 65755302 65755553 -100894743 + BLACKJACK DNA AcHobo 2200 2469 -475 3 1086 21 36 0 0 chrX 65755985 65756013 -100894283 + AT_rich Low_complexity Low_complexity 1 28 0 3 1086 22 56 0 0 chrX 65757696 65757732 -100892564 + AT_rich Low_complexity Low_complexity 1 36 0 3 1086 5286 92 14 0 chrX 65758207 65759001 -100891295 - L1_Mus3 LINE L1 -315 6323 5519 3 1086 2028 77 24 3 chrX 65759001 65759288 -100891008 + L1_Mus3 LINE L1 6333 6625 -13 3 1086 540 0 0 0 chrX 65759296 65759356 -100890940 + (TAAAA)n Simple_repeat Simple_repeat 2 61 0 3 1086 651 360 90 60 chrX 65760367 65760836 -100889460 + LTR85a LTR Gypsy? 220 702 0 3 1086 259 263 13 38 chrX 65761559 65761638 -100888658 + L2b LINE L2 3287 3363 -12 3 1086 513 336 30 26 chrX 65761901 65762170 -100888126 - MamRep434 DNA TcMar -146 280 11 3 1086 287 327 61 91 chrX 65762965 65763359 -100886937 + Tigger15a DNA TcMar 181 562 -153 3 1086 857 220 44 26 chrX 65763771 65764000 -100886296 - MT2B LTR ERVL 0 601 243 3 1086 983 130 6 6 chrX 65764966 65765128 -100885168 + BGLII_A LTR ERVK 1 162 -283 3 1086 2007 138 38 58 chrX 65765097 65765404 -100884892 - BGLII_A LTR ERVK -60 385 76 3 1086 1217 102 91 14 chrX 65765404 65765623 -100884673 - L1_Mus3 LINE L1 -5 6633 6398 3 1086 2007 138 38 58 chrX 65765623 65765708 -100884588 - BGLII_A LTR ERVK -370 75 1 3 1086 297 308 15 37 chrX 65766209 65766344 -100883952 - RMER12 LTR ERVK -467 855 724 3 1086 22 0 0 0 chrX 65766639 65766661 -100883635 + AT_rich Low_complexity Low_complexity 1 22 0 3 1086 449 273 19 68 chrX 65766674 65766835 -100883461 - RSINE1 SINE B4 -1 164 12 3 1086 842 309 119 19 chrX 65767034 65767664 -100882632 + L1MA5A LINE L1 5032 5768 -529 3 1086 423 0 0 0 chrX 65767664 65767711 -100882585 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1086 842 300 121 15 chrX 65767711 65767854 -100882442 + L1MA5A LINE L1 5769 5935 -362 3 1086 364 271 40 0 chrX 65768011 65768129 -100882167 + B4 SINE B4 13 141 -83 3 1086 576 318 26 22 chrX 65768354 65768627 -100881669 + B4A SINE B4 1 274 -18 3 1086 186 209 0 0 chrX 65768666 65768709 -100881587 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1086 1562 239 68 16 chrX 65768884 65769326 -100880970 + Lx7 LINE L1 5868 6332 -1364 3 1086 1084 96 24 6 chrX 65769325 65769492 -100880804 - L1_Mus1 LINE L1 -22 6545 6376 3 1086 25 0 0 0 chrX 65769816 65769841 -100880455 + AT_rich Low_complexity Low_complexity 1 25 0 3 1086 38489 4 1 0 chrX 65769856 65775230 -100875066 + L1Md_A LINE L1 210 5586 -297 3 1086 8939 6 0 0 chrX 65775230 65776226 -100874070 + L1Md_A LINE L1 5587 6582 0 3 1086 1239 41 0 0 chrX 65776304 65776451 -100873845 + B1_Mm SINE Alu 1 147 0 3 1086 32 0 0 0 chrX 65776451 65776483 -100873813 + AT_rich Low_complexity Low_complexity 1 32 0 3 1086 209 262 0 24 chrX 65777319 65777401 -100872895 + (TCTCTG)n Simple_repeat Simple_repeat 3 82 0 3 1086 26 88 0 0 chrX 65777527 65777595 -100872701 + AT_rich Low_complexity Low_complexity 1 68 0 3 1086 5267 90 35 0 chrX 65778040 65779525 -100870771 + L1Md_F2 LINE L1 414 1952 -3931 3 1086 8287 67 2 0 chrX 65779529 65780650 -100869646 + L1Md_F2 LINE L1 4464 5586 -297 3 1086 7229 69 20 20 chrX 65780651 65781645 -100868651 + L1Md_F2 LINE L1 5588 6581 -1 3 1086 394 235 0 10 chrX 65783443 65783542 -100866754 - L1M3 LINE L1 -1550 4590 4493 3 1086 3674 200 86 8 chrX 65783567 65784415 -100865881 - Lx9 LINE L1 -1 7643 6730 3 1086 188 0 74 0 chrX 65784729 65784756 -100865540 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1086 1286 231 115 0 chrX 65784874 65785186 -100865110 + MT2A LTR ERVL 186 533 0 3 1086 231 154 51 0 chrX 65785534 65785573 -100864723 - B3 SINE B2 -175 41 1 3 1086 249 186 120 67 chrX 65785587 65785662 -100864634 - ID2 SINE ID -4 79 1 3 1086 820 138 24 6 chrX 65785664 65785832 -100864464 + CT-rich Low_complexity Low_complexity 2 172 0 3 1086 740 236 116 39 chrX 65785834 65786041 -100864255 - ID_B1 SINE B4 0 224 2 3 1086 6494 34 2 10 chrX 65786846 65787637 -100862659 - L1Md_F3 LINE L1 -1 6583 5799 3 1086 463 72 0 0 chrX 65787637 65787701 -100862595 + L1_Mm LINE L1 4979 5042 -841 3 1086 235 337 39 73 chrX 65788071 65788098 -100862198 + YREP_Mm Unknown Unknown 156 232 -1580 3 1086 1037 65 14 0 chrX 65788098 65788237 -100862059 - B1_Mus1 SINE Alu -1 147 7 3 1086 235 337 39 73 chrX 65788237 65788276 -100862020 + YREP_Mm Unknown Unknown 233 353 -1459 3 1086 308 261 10 102 chrX 65788442 65788540 -100861756 + 4.5SRNA scRNA scRNA 1 89 -5 3 1086 673 174 22 163 chrX 65788588 65788643 -100861653 + ORR1B1 LTR MaLR 191 221 -173 3 1086 849 58 25 0 chrX 65788643 65788763 -100861533 - L1_Mus1 LINE L1 0 6567 6445 3 1086 673 174 22 163 chrX 65788763 65788885 -100861411 + ORR1B1 LTR MaLR 222 343 -51 3 1086 314 237 39 97 chrX 65788896 65788999 -100861297 - L1MDb LINE L1 -6253 156 60 3 1086 254 277 106 9 chrX 65789725 65789838 -100860458 - MER53 DNA hAT -5 188 65 3 1086 227 204 0 0 chrX 65790017 65790066 -100860230 + T-rich Low_complexity Low_complexity 1 49 0 3 1086 309 51 0 0 chrX 65790124 65790163 -100860133 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1086 244 315 0 0 chrX 65790350 65790404 -100859892 - B4A SINE B4 -236 56 3 3 1086 25 0 0 0 chrX 65790407 65790432 -100859864 + AT_rich Low_complexity Low_complexity 1 25 0 3 1086 331 278 182 47 chrX 65790902 65791072 -100859224 + B3A SINE B2 2 194 -4 3 1086 13111 94 2 1 chrX 65791243 65793637 -100856659 + L1_Mus2 LINE L1 3894 6288 -278 3 1086 351 65 0 0 chrX 65793628 65793674 -100856622 + L1_Mus2 LINE L1 6398 6443 -123 3 1086 351 165 25 0 chrX 65793684 65793763 -100856533 + Lx9 LINE L1 7533 7613 -31 3 1086 8282 19 0 0 chrX 65793797 65794914 -100855382 - L1Md_A LINE L1 0 6582 5526 3 1086 5481 11 0 0 chrX 65794911 65795568 -100854728 + L1_Mm LINE L1 3709 4365 -1518 3 1086 386 314 89 0 chrX 65795738 65795862 -100854434 - B1F2 SINE Alu -14 135 1 3 1086 22 0 0 0 chrX 65796618 65796640 -100853656 + AT_rich Low_complexity Low_complexity 1 22 0 3 1086 1697 215 22 217 chrX 65796698 65797260 -100853036 + RMER19C LTR ERVK 1 425 -186 3 1086 423 0 0 0 chrX 65797260 65797307 -100852989 + (ATG)n Simple_repeat Simple_repeat 1 47 0 3 1086 1697 215 22 217 chrX 65797307 65797503 -100852793 + RMER19C LTR ERVK 426 611 0 3 1087 894 293 202 41 chrX 65798858 65799398 -100850898 - MLT1E2 LTR MaLR 0 627 1 3 1087 209 341 24 12 chrX 65799398 65799481 -100850815 - MIRc SINE MIR -166 102 19 3 1087 7177 99 28 3 chrX 65800189 65801264 -100849032 + Lx3_Mus LINE L1 5908 7009 0 3 1087 3241 161 11 5 chrX 65801823 65802385 -100847911 + Lx LINE L1 6090 6654 0 3 1087 772 255 80 75 chrX 65803214 65803769 -100846527 + L1MB5 LINE L1 5335 5917 -257 3 1087 255 61 0 0 chrX 65803800 65803833 -100846463 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 1087 252 0 0 0 chrX 65804705 65804733 -100845563 + (T)n Simple_repeat Simple_repeat 1 28 0 3 1087 180 322 57 11 chrX 65804842 65804930 -100845366 + MIRc SINE MIR 43 134 -134 3 1087 343 293 41 118 chrX 65805024 65805194 -100845102 + MIRb SINE MIR 93 249 -19 4 1087 1059 167 23 10 chrX 65805792 65806054 -100844242 + RMER17B LTR ERVK 1 196 -762 4 1087 535 163 0 0 chrX 65806045 65806137 -100844159 + RMER17B LTR ERVK 867 958 0 4 1087 24 53 0 0 chrX 65806477 65806515 -100843781 + AT_rich Low_complexity Low_complexity 1 38 0 4 1087 409 220 152 0 chrX 65806996 65807114 -100843182 + Lx7 LINE L1 6784 6919 -777 4 1087 692 94 0 9 chrX 65808445 65808552 -100841744 + (TC)n Simple_repeat Simple_repeat 1 106 0 4 1087 273 308 86 25 chrX 65808688 65808851 -100841445 - MIRb SINE MIR -73 195 23 4 1087 270 56 0 0 chrX 65808884 65808920 -100841376 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1087 3859 28 0 0 chrX 65809025 65809498 -100840798 - L1_Mm LINE L1 -973 4910 4438 4 1087 2115 27 0 0 chrX 65809493 65809749 -100840547 + L1Md_A LINE L1 5331 5586 -297 4 1087 8573 27 0 0 chrX 65809749 65810744 -100839552 + L1Md_A LINE L1 5587 6581 -1 4 1087 292 298 32 0 chrX 65810824 65810918 -100839378 - MIR3 SINE MIR -5 203 107 4 1087 233 260 0 135 chrX 65811069 65811158 -100839138 - L3 LINE CR1 -195 4294 4218 4 1087 649 308 33 18 chrX 65812078 65812412 -100837884 - L1M2 LINE L1 -1361 4782 4444 4 1087 405 0 0 0 chrX 65812413 65812458 -100837838 + (TTTTG)n Simple_repeat Simple_repeat 3 47 0 4 1087 1058 137 18 6 chrX 65812468 65812637 -100837659 - B2_Mm2 SINE B2 -24 171 1 4 1087 556 328 12 0 chrX 65812773 65813014 -100837282 - L1M2 LINE L1 -1917 4223 3980 4 1087 584 302 81 27 chrX 65813025 65813587 -100836709 + L1MA4 LINE L1 5254 5861 -439 4 1087 236 389 79 0 chrX 65813727 65813943 -100836353 + L2 LINE L2 2407 2639 -780 4 1087 755 328 15 5 chrX 65814122 65814327 -100835969 - MER58A DNA MER1_type -15 209 3 4 1087 5868 131 19 32 chrX 65815104 65816151 -100834145 + Lx3B LINE L1 5904 6936 -37 4 1087 1689 247 103 68 chrX 65816805 65818113 -100832183 + RMER1B Other Other 2 1061 -5 4 1087 709 285 8 133 chrX 65818287 65818663 -100831633 + L1VL1 LINE L1 29 357 -6065 4 1087 472 258 26 6 chrX 65818744 65818900 -100831396 + L1_Mus2 LINE L1 675 833 -5783 4 1087 1208 167 13 0 chrX 65818879 65819112 -100831184 + L1_Mus2 LINE L1 725 960 -5656 4 1087 19880 104 9 73 chrX 65819104 65821716 -100828580 + L1_Mus2 LINE L1 2456 4836 -1047 4 1087 7914 45 5 0 chrX 65821716 65822692 -100827604 + L1Md_F3 LINE L1 5588 6568 -16 4 1087 19880 104 9 73 chrX 65822692 65823106 -100827190 + L1_Mus2 LINE L1 4837 5234 -649 4 1087 570 29 0 0 chrX 65823106 65823174 -100827122 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 1087 19880 104 9 73 chrX 65823174 65823726 -100826570 + L1_Mus2 LINE L1 5235 5804 -79 4 1087 4790 31 31 9 chrX 65823727 65824303 -100825993 - L1Md_F2 LINE L1 0 6582 5994 4 1087 5747 75 4 12 chrX 65824304 65825071 -100825225 + L1_Mus2 LINE L1 5805 6565 -1 4 1087 220 27 26 26 chrX 65825315 65825353 -100824943 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 4 1087 1022 87 0 0 chrX 65825361 65825499 -100824797 - B1_Mus1 SINE Alu -6 142 5 4 1087 220 305 12 47 chrX 65825554 65825617 -100824679 + ID4_ SINE ID 1 61 -22 4 1087 8301 21 0 0 chrX 65825617 65826546 -100823750 - RLTR13B3 LTR ERVK 0 929 1 4 1087 220 305 12 47 chrX 65826546 65826568 -100823728 + ID4_ SINE ID 62 83 0 4 1087 713 177 0 11 chrX 65826569 65826746 -100823550 + GA-rich Low_complexity Low_complexity 4 178 0 4 1087 21 57 0 0 chrX 65828877 65828912 -100821384 + AT_rich Low_complexity Low_complexity 1 35 0 4 1087 861 278 124 34 chrX 65831098 65831485 -100818811 + MLT1D LTR MaLR 82 503 -2 4 1087 196 309 0 0 chrX 65831809 65831851 -100818445 - L2b LINE L2 -18 3357 3316 4 1087 4523 14 0 0 chrX 65831917 65832425 -100817871 + L1Md_A LINE L1 6074 6581 -1 4 1087 1007 169 32 81 chrX 65832508 65832792 -100817504 - RMER1C Other Other -32 1310 1041 4 1087 1477 181 53 42 chrX 65832788 65833145 -100817151 - Lx4B LINE L1 0 7058 6698 4 1087 1090 59 0 0 chrX 65833764 65833900 -100816396 + B1_Mus1 SINE Alu 2 137 -11 4 1087 222 150 0 0 chrX 65833949 65833989 -100816307 + (CTG)n Simple_repeat Simple_repeat 2 41 0 4 1087 1115 257 36 82 chrX 65833990 65834440 -100815856 - RMER1C Other Other -334 1008 580 4 1087 603 0 0 0 chrX 65834474 65834541 -100815755 + (CTG)n Simple_repeat Simple_repeat 3 69 0 4 1087 1894 147 7 16 chrX 65836238 65836542 -100813754 - MTC LTR MaLR -1 420 120 4 1087 603 153 36 0 chrX 65836839 65836950 -100813346 - MTC LTR MaLR -306 115 1 4 1087 319 333 86 35 chrX 65837135 65837309 -100812987 - LTR81A LTR ERV1? -843 507 325 4 1087 222 37 0 0 chrX 65837378 65837405 -100812891 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 4 1087 618 292 0 0 chrX 65837413 65837557 -100812739 - RSINE1 SINE B4 -19 146 3 4 1087 378 0 0 0 chrX 65837910 65837952 -100812344 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 4 1087 284 316 44 29 chrX 65838011 65838148 -100812148 - Tigger14a DNA MER2_type -172 152 14 4 1087 207 162 0 0 chrX 65839065 65839102 -100811194 + (ATG)n Simple_repeat Simple_repeat 1 37 0 4 1087 525 32 0 0 chrX 65839485 65839548 -100810748 + (CTTG)n Simple_repeat Simple_repeat 4 66 0 4 1087 243 0 0 0 chrX 65839858 65839885 -100810411 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 4 1087 4177 36 0 4 chrX 65839912 65840408 -100809888 - L1Md_F2 LINE L1 -8 6574 6081 4 1087 1971 54 0 0 chrX 65841271 65841529 -100808767 - L1_Mus4 LINE L1 -769 5867 5610 4 1087 5833 81 16 2 chrX 65841529 65842330 -100807966 + L1_Mus4 LINE L1 5821 6632 -4 4 1087 7630 155 37 5 chrX 65842645 65845027 -100805269 - Lx5 LINE L1 -8 7042 4571 4 1087 831 296 211 29 chrX 65845025 65846244 -100804052 + L1M2 LINE L1 1529 3006 -3137 4 1087 487 133 0 30 chrX 65846250 65846351 -100803945 + Lx2A1 LINE L1 6909 7006 -2 4 1087 694 266 195 29 chrX 65846361 65846734 -100803562 + L1M2 LINE L1 4677 5148 -995 4 1087 676 186 64 80 chrX 65846734 65846921 -100803375 - B2_Mm2 SINE B2 -9 186 3 4 1087 694 266 195 29 chrX 65846921 65847105 -100803191 + L1M2 LINE L1 5118 5327 -553 4 1087 1440 78 0 5 chrX 65847106 65847300 -100802996 + B2_Mm2 SINE B2 1 193 -2 4 1087 307 278 0 9 chrX 65847305 65847414 -100802882 - Lx7 LINE L1 -10 7686 7579 4 1087 1701 242 60 18 chrX 65847636 65848090 -100802206 - Lx7 LINE L1 -264 7432 6960 4 1087 449 275 72 11 chrX 65848104 65848284 -100802012 + L1M2 LINE L1 5355 5545 -335 4 1087 261 128 0 0 chrX 65848284 65848331 -100801965 + (T)n Simple_repeat Simple_repeat 1 47 0 4 1087 1106 50 0 28 chrX 65848332 65848476 -100801820 - B1_Mm SINE Alu 0 147 8 4 1087 635 204 48 36 chrX 65848337 65848505 -100801791 - ID_B1 SINE B4 -1 223 54 4 1087 2121 159 10 3 chrX 65848505 65848895 -100801401 - Lx2 LINE L1 -563 6434 6042 4 1087 1149 118 75 14 chrX 65848896 65849110 -100801186 + Lx2 LINE L1 5791 6017 -980 4 1087 496 295 86 11 chrX 65850545 65850720 -100799576 + MER115 DNA Tip100 489 676 -17 4 1087 1608 227 42 10 chrX 65850729 65851134 -100799162 + MTD LTR MaLR 1 418 -1 4 1087 230 304 0 0 chrX 65851968 65852024 -100798272 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 1087 297 0 0 0 chrX 65852106 65852139 -100798157 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1087 195 373 94 16 chrX 65852455 65852583 -100797713 + MIRb SINE MIR 21 158 -110 4 1087 386 50 33 0 chrX 65853093 65853153 -100797143 + (TCTCTG)n Simple_repeat Simple_repeat 3 64 0 4 1087 333 295 47 19 chrX 65853471 65853578 -100796718 - L3 LINE CR1 -111 4378 4269 4 1087 195 386 22 22 chrX 65853914 65854004 -100796292 - L2b LINE L2 0 3375 3286 4 1087 2876 168 6 15 chrX 65854235 65854754 -100795542 - Lx LINE L1 0 6654 6141 4 1087 1192 81 0 0 chrX 65854795 65854943 -100795353 + B1_Mus1 SINE Alu 1 148 0 4 1087 279 257 29 0 chrX 65855131 65855201 -100795095 + L2 LINE L2 2369 2440 -979 4 1087 230 318 62 56 chrX 65855488 65855648 -100794648 - MLT1A1 LTR MaLR -245 163 3 4 1087 235 241 15 121 chrX 65855944 65856076 -100794220 + Lx9 LINE L1 6187 6304 -1340 4 1087 549 0 0 0 chrX 65856164 65856225 -100794071 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1087 243 394 38 0 chrX 65856278 65856410 -100793886 - MER90 LTR ERV1 -28 547 411 4 1087 568 309 97 94 chrX 65856453 65856846 -100793450 - Lx8 LINE L1 -64 7409 7016 4 1087 827 39 0 0 chrX 65858388 65858492 -100791804 - L1_Mus3 LINE L1 -783 5855 5752 4 1087 6035 64 9 9 chrX 65858492 65859293 -100791003 + L1_Mus3 LINE L1 5838 6638 0 4 1087 807 156 20 8 chrX 65859301 65859456 -100790840 + B2_Mm2 SINE B2 2 171 -45 4 1087 399 41 0 0 chrX 65859459 65859508 -100790788 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 4 1087 295 297 0 13 chrX 65859842 65859917 -100790379 + polypurine Low_complexity Low_complexity 3 76 0 4 1087 492 18 0 0 chrX 65859920 65859977 -100790319 + (GGGGA)n Simple_repeat Simple_repeat 4 60 0 4 1087 1194 107 0 0 chrX 65859980 65860157 -100790139 + (GAGAA)n Simple_repeat Simple_repeat 1 177 0 4 1087 204 40 0 0 chrX 65860342 65860367 -100789929 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 1087 36953 43 2 7 chrX 65860523 65866729 -100783567 - L1Md_F2 LINE L1 -1 6581 416 4 1087 762 11 0 0 chrX 65867342 65867429 -100782867 + (GAA)n Simple_repeat Simple_repeat 2 88 0 4 1087 315 71 0 0 chrX 65868519 65868561 -100781735 + (TTA)n Simple_repeat Simple_repeat 1 42 0 4 1087 8976 96 14 8 chrX 65868563 65870212 -100780084 - Lx3C LINE L1 -3 6973 5317 4 1087 358 315 82 40 chrX 65870638 65870820 -100779476 - MIRb SINE MIR -15 247 46 4 1087 374 343 60 26 chrX 65871100 65871353 -100778943 - MamGypLTR1c LTR Gypsy 0 813 540 4 1087 639 243 0 46 chrX 65872039 65872233 -100778063 + Lx6 LINE L1 7248 7432 -28 4 1087 25 0 0 0 chrX 65872234 65872259 -100778037 + AT_rich Low_complexity Low_complexity 1 25 0 4 1087 279 296 80 25 chrX 65872259 65872422 -100777874 + L1_Mur2 LINE L1 523 694 -6376 4 1087 994 149 28 3 chrX 65872481 65872796 -100777500 + L1_Mur2 LINE L1 888 1280 -5790 4 1087 6069 156 11 40 chrX 65872791 65873019 -100777277 + Lx5 LINE L1 4736 4966 -920 4 1087 746 84 244 0 chrX 65873019 65873138 -100777158 + B1_Mus1 SINE Alu 1 148 0 4 1087 6412 177 37 21 chrX 65873138 65875169 -100775127 + Lx5 LINE L1 4967 7034 -16 4 1087 216 0 0 0 chrX 65875169 65875193 -100775103 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 4 1087 319 217 0 185 chrX 65875471 65875601 -100774695 - B1F SINE Alu -34 115 10 4 1087 236 196 0 0 chrX 65876098 65876144 -100774152 + (TTAG)n Simple_repeat Simple_repeat 3 48 0 4 1087 717 278 42 0 chrX 65876147 65876291 -100774005 - RSINE1 SINE B4 -12 153 4 4 1087 664 216 280 18 chrX 65876608 65876887 -100773409 - ORR1E LTR MaLR -4 366 14 4 1087 4432 63 46 10 chrX 65876908 65877533 -100772763 - L1_Mus3 LINE L1 0 6638 6002 4 1087 361 175 45 89 chrX 65877542 65877699 -100772597 - RMER17B LTR ERVK -499 459 310 4 1087 3820 49 24 0 chrX 65877700 65878311 -100771985 - L1_Mus3 LINE L1 -627 6011 5382 5 1087 575 242 90 8 chrX 65878406 65878539 -100771757 - B1_Mus1 SINE Alu -5 144 1 5 1087 467 299 67 31 chrX 65878904 65879097 -100771199 - L2a LINE L2 -3 3423 3224 5 1087 198 71 0 0 chrX 65879485 65879513 -100770783 + (CTGTG)n Simple_repeat Simple_repeat 2 29 0 5 1087 314 109 0 0 chrX 65879810 65879856 -100770440 - HAL1-3A_ME LINE L1 -832 2026 1981 5 1087 723 80 0 0 chrX 65879856 65879968 -100770328 + (TC)n Simple_repeat Simple_repeat 1 112 0 5 1087 198 0 0 0 chrX 65879968 65879989 -100770307 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 1087 299 348 17 0 chrX 65879994 65880112 -100770184 - Lx7 LINE L1 -388 7308 7189 5 1087 213 242 15 46 chrX 65880390 65880455 -100769841 + CT-rich Low_complexity Low_complexity 6 68 0 5 1087 1285 236 95 33 chrX 65880811 65881266 -100769030 - RLTR20B3 LTR ERVK -56 521 21 5 1087 22 56 0 0 chrX 65881751 65881787 -100768509 + AT_rich Low_complexity Low_complexity 1 36 0 5 1087 33 25 0 0 chrX 65882494 65882534 -100767762 + AT_rich Low_complexity Low_complexity 1 40 0 5 1087 832 283 36 79 chrX 65884970 65885250 -100765046 + B4A SINE B4 1 268 -24 5 1087 1317 296 79 64 chrX 65885411 65885971 -100764325 - MLT-int LTR MaLR -1079 656 89 5 1087 1646 259 64 28 chrX 65885982 65886958 -100763338 + Lx6 LINE L1 6114 7434 -26 5 1087 457 140 0 61 chrX 65886961 65887060 -100763236 + Lx LINE L1 6562 6654 0 5 1087 253 298 0 23 chrX 65887080 65887166 -100763130 - MLT1-int LTR MaLR -1272 99 16 5 1087 23 78 0 0 chrX 65887365 65887416 -100762880 + AT_rich Low_complexity Low_complexity 1 51 0 5 1087 208 188 21 0 chrX 65887453 65887501 -100762795 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 5 1087 419 318 16 80 chrX 65887780 65888094 -100762202 + L1M5 LINE L1 4768 5061 -1085 5 1087 25 83 0 0 chrX 65888170 65888230 -100762066 + AT_rich Low_complexity Low_complexity 1 60 0 5 1087 42 77 0 0 chrX 65888489 65888580 -100761716 + AT_rich Low_complexity Low_complexity 1 91 0 5 1087 248 314 42 0 chrX 65889210 65889328 -100760968 + L1M5 LINE L1 5779 5901 -339 5 1087 296 296 58 13 chrX 65889606 65889760 -100760536 + Lx8 LINE L1 7303 7463 -10 5 1087 2572 122 16 30 chrX 65889833 65890271 -100760025 + Lx4A LINE L1 6622 7053 -5 5 1087 3351 246 65 78 chrX 65890287 65890569 -100759727 + Lx7 LINE L1 6022 6275 -1421 5 1087 4308 61 2 12 chrX 65890569 65891134 -100759162 + L1Md_F2 LINE L1 6020 6578 -4 5 1087 3351 246 65 78 chrX 65891134 65891153 -100759143 + Lx7 LINE L1 6276 6276 -1420 5 1087 1259 66 21 21 chrX 65891153 65891327 -100758969 + L1Md_F2 LINE L1 6384 6559 -23 5 1087 207 0 0 0 chrX 65891327 65891350 -100758946 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 5 1087 1259 66 21 21 chrX 65891350 65891362 -100758934 + L1Md_F2 LINE L1 6560 6569 -13 5 1087 3351 246 65 78 chrX 65891362 65892392 -100757904 + Lx7 LINE L1 6276 7336 -360 5 1087 21 57 0 0 chrX 65892563 65892598 -100757698 + AT_rich Low_complexity Low_complexity 1 35 0 5 1087 3365 131 75 43 chrX 65892695 65892949 -100757347 + RMER6C LTR ERVK 1 279 -411 5 1087 279 0 0 0 chrX 65892949 65892980 -100757316 + (ATTG)n Simple_repeat Simple_repeat 2 32 0 5 1087 2264 174 35 5 chrX 65892980 65893385 -100756911 - Lx4B LINE L1 -19 7039 6623 5 1087 3365 131 75 43 chrX 65893385 65893798 -100756498 + RMER6C LTR ERVK 280 689 -1 5 1087 208 331 170 21 chrX 65894568 65894762 -100755534 - MIRb SINE MIR -43 225 3 5 1087 597 192 160 0 chrX 65895504 65895629 -100754667 - B1F2 SINE Alu -4 145 1 5 1087 566 210 20 55 chrX 65895714 65895860 -100754436 + B1_Mur3 SINE Alu 1 141 -8 5 1087 359 234 196 0 chrX 65896653 65896760 -100753536 - RSINE1 SINE B4 -35 130 3 5 1087 207 0 0 0 chrX 65896864 65896887 -100753409 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 1087 360 59 0 0 chrX 65896888 65896939 -100753357 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 5 1087 1876 32 0 0 chrX 65897251 65897472 -100752824 + L1Md_T LINE L1 6361 6581 -1 5 1087 213 196 0 0 chrX 65898875 65898931 -100751365 + (CAG)n Simple_repeat Simple_repeat 2 57 0 5 1087 394 222 0 0 chrX 65899035 65899116 -100751180 + ID4 SINE ID 3 83 0 5 1087 561 30 0 0 chrX 65900532 65900599 -100749697 + (GGA)n Simple_repeat Simple_repeat 3 69 0 5 1087 526 307 31 19 chrX 65901049 65901348 -100748948 + L1MB8 LINE L1 5465 5767 -407 5 1087 3997 28 17 0 chrX 65901577 65902046 -100748250 + L1Md_F2 LINE L1 6092 6568 -14 5 1087 384 241 0 9 chrX 65902057 65902166 -100748130 + L1MB8 LINE L1 6059 6166 -12 5 1087 204 246 15 0 chrX 65902239 65902304 -100747992 + (TA)n Simple_repeat Simple_repeat 1 66 0 5 1087 2061 163 0 3 chrX 65902306 65902644 -100747652 - Lx4A LINE L1 -1 7057 6721 5 1087 644 250 29 24 chrX 65902816 65903021 -100747275 - Lx4B LINE L1 0 7058 6853 5 1087 3752 67 4 8 chrX 65903127 65903621 -100746675 - L1Md_F2 LINE L1 0 6582 6091 5 1087 1164 55 0 7 chrX 65903644 65903791 -100746505 + B1_Mm SINE Alu 2 147 0 5 1087 198 209 0 0 chrX 65904661 65904704 -100745592 + GA-rich Low_complexity Low_complexity 2 44 0 5 1087 2958 149 11 2 chrX 65905375 65905851 -100744445 + Lx2B LINE L1 6517 6996 -4 5 1087 593 270 87 7 chrX 65905894 65906043 -100744253 + RSINE1 SINE B4 5 165 0 5 1087 444 81 35 0 chrX 65906067 65906154 -100744142 + (TAGA)n Simple_repeat Simple_repeat 1 90 0 5 1087 266 390 24 0 chrX 65906911 65906993 -100743303 - RSINE1 SINE B4 -17 148 65 5 1087 206 239 0 0 chrX 65907656 65907702 -100742594 + (TTAG)n Simple_repeat Simple_repeat 2 47 0 5 1087 484 260 101 16 chrX 65907709 65907838 -100742458 - RSINE1 SINE B4 -24 141 2 5 1087 519 98 0 32 chrX 65907850 65907945 -100742351 + (TTCC)n Simple_repeat Simple_repeat 3 94 0 5 1087 3805 196 110 16 chrX 65907983 65908937 -100741359 - Lx5 LINE L1 -19 7031 5988 5 1087 1642 89 96 0 chrX 65908935 65909217 -100741079 - L1_Mur2 LINE L1 -2284 3593 3285 5 1087 268 122 0 0 chrX 65909260 65909301 -100740995 - L1MA5 LINE L1 -16 6284 6244 5 1087 632 297 57 28 chrX 65909621 65909961 -100740335 + MLT2B1 LTR ERVL 1 371 -43 5 1087 690 286 57 27 chrX 65909998 65910329 -100739967 + L1MB3 LINE L1 5839 6179 -4 5 1087 376 316 9 28 chrX 65910449 65910667 -100739629 + L1M5 LINE L1 5530 5743 -381 5 1087 565 296 12 81 chrX 65910758 65910931 -100739365 + MER5B DNA MER1_type 17 177 -1 5 1087 337 326 132 25 chrX 65911052 65911294 -100739002 + HAL1 LINE L1 2 269 -2238 5 1087 340 294 38 25 chrX 65911311 65911468 -100738828 + HAL1 LINE L1 1291 1449 -1058 5 1087 2867 72 37 35 chrX 65911805 65911987 -100738309 + L1_Mus3 LINE L1 6201 6386 -252 5 1087 1067 50 58 0 chrX 65911987 65912126 -100738170 + B1_Mm SINE Alu 1 147 0 5 1087 534 16 0 0 chrX 65912129 65912192 -100738104 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 1087 2867 72 37 35 chrX 65912192 65912436 -100737860 + L1_Mus3 LINE L1 6387 6632 -6 5 1087 1442 27 16 26 chrX 65912445 65912634 -100737662 + B2_Mm1t SINE B2 1 187 -6 5 1087 4186 162 53 85 chrX 65912665 65913603 -100736693 - RMER13B LTR ERVK 0 908 1 5 1087 255 309 24 0 chrX 65913613 65913697 -100736599 + MLT1K LTR MaLR 506 591 -4 5 1087 916 199 193 0 chrX 65913702 65913883 -100736413 + B3 SINE B2 1 216 0 5 1087 1428 233 173 12 chrX 65914129 65914551 -100735745 - Lx6 LINE L1 -4 7456 6967 5 1087 1615 225 61 2 chrX 65914551 65914947 -100735349 + Lx6 LINE L1 6289 6707 -753 5 1087 225 228 18 0 chrX 65914946 65915003 -100735293 + Lx7 LINE L1 6758 6815 -881 5 1087 751 188 0 7 chrX 65915204 65915354 -100734942 - Lx9 LINE L1 -217 7427 7279 5 1087 442 121 12 0 chrX 65915362 65915445 -100734851 + Lx9 LINE L1 7560 7643 -1 5 1087 547 321 0 28 chrX 65915537 65915678 -100734618 + RSINE1 SINE B4 3 139 -26 5 1087 24 0 0 0 chrX 65915699 65915723 -100734573 + AT_rich Low_complexity Low_complexity 1 24 0 5 1087 489 292 31 0 chrX 65915888 65916018 -100734278 - B3 SINE B2 -8 208 75 5 1087 2454 108 5 0 chrX 65916141 65916510 -100733786 + Lx2 LINE L1 6065 6435 -562 5 1087 2657 71 25 3 chrX 65916510 65916863 -100733433 + Lx2 LINE L1 6637 6997 0 5 1087 238 191 0 0 chrX 65916967 65917014 -100733282 + (TATG)n Simple_repeat Simple_repeat 2 48 0 5 1087 656 278 12 0 chrX 65917018 65917191 -100733105 + Lx9 LINE L1 7283 7457 -187 5 1087 1220 233 43 28 chrX 65917191 65917513 -100732783 + RCHARR1 DNA MER1_type 445 771 -203 5 1087 423 189 19 78 chrX 65917528 65917631 -100732665 - MT2A LTR ERVL -352 181 85 5 1087 710 172 31 8 chrX 65917617 65917746 -100732550 - MT2A LTR ERVL -401 132 1 5 1087 302 60 80 0 chrX 65917748 65917798 -100732498 - MERVL_2A-int LTR ERVL -2 5759 5706 5 1087 325 222 43 32 chrX 65917798 65917891 -100732405 - ORR1A3-int LTR MaLR -1324 639 546 5 1087 633 159 8 8 chrX 65917893 65918020 -100732276 - MERVL_2A-int LTR ERVL -82 5679 5553 5 1087 2431 59 9 12 chrX 65918020 65918363 -100731933 + L1Md_F2 LINE L1 6218 6559 -23 5 1087 396 0 0 0 chrX 65918367 65918411 -100731885 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 5 1087 2171 142 3 22 chrX 65918429 65918795 -100731501 - MERVL_2A-int LTR ERVL -204 5557 5199 5 1087 1272 158 15 0 chrX 65918795 65918997 -100731299 - URR1B DNA MER1_type 0 225 21 5 1087 2322 154 30 45 chrX 65918999 65919467 -100730829 - MERVL_2A-int LTR ERVL -4570 1191 731 5 1087 2843 77 20 5 chrX 65919972 65920365 -100729931 - Lx LINE L1 -7 6647 6249 5 1087 195 125 0 0 chrX 65920456 65920496 -100729800 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1087 515 245 0 29 chrX 65920513 65920618 -100729678 - ID_B1 SINE B4 -42 182 81 5 1087 715 214 121 0 chrX 65923145 65923327 -100726969 + Lx6 LINE L1 6888 7091 -369 5 1087 333 194 7 76 chrX 65923343 65923406 -100726890 + Lx7 LINE L1 7412 7468 -228 5 1087 561 105 0 37 chrX 65923406 65923515 -100726781 - L1_Mus2 LINE L1 0 6566 6462 5 1087 333 194 7 76 chrX 65923515 65923596 -100726700 + Lx7 LINE L1 7469 7546 -150 5 1087 302 284 18 9 chrX 65923664 65923774 -100726522 + Lx7 LINE L1 7189 7299 -397 5 1087 384 128 0 0 chrX 65923792 65923870 -100726426 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 1087 194 116 0 23 chrX 65923904 65923948 -100726348 + (TTTTTG)n Simple_repeat Simple_repeat 5 47 0 5 1087 30 27 0 0 chrX 65924111 65924148 -100726148 + AT_rich Low_complexity Low_complexity 1 37 0 5 1087 708 243 20 7 chrX 65924262 65924411 -100725885 + B3 SINE B2 66 216 0 5 1087 354 333 0 0 chrX 65924439 65924544 -100725752 + PB1D9 SINE Alu 4 108 -12 6 1087 23 0 0 0 chrX 65924558 65924581 -100725715 + AT_rich Low_complexity Low_complexity 1 23 0 6 1087 760 281 25 36 chrX 65924592 65924873 -100725423 + B4A SINE B4 3 280 -12 6 1087 185 0 40 0 chrX 65924931 65924956 -100725340 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 1087 1150 264 49 32 chrX 65925936 65926346 -100723950 - MTD LTR MaLR -2 417 1 6 1087 258 420 57 41 chrX 65927595 65927841 -100722455 - LTR88c LTR Genie? -559 303 54 6 1087 461 256 32 24 chrX 65927970 65928094 -100722202 - ID_B1 SINE B4 -5 219 95 6 1087 234 349 37 66 chrX 65928414 65928576 -100721720 - L2a LINE L2 -3 3423 3243 6 1087 193 367 25 0 chrX 65929020 65929099 -100721197 - L2c LINE L2 -56 3331 3251 6 1088 495 264 0 0 chrX 65929257 65929367 -100720929 + PB1D9 SINE Alu 3 112 -8 6 1088 233 296 60 20 chrX 65929458 65929558 -100720738 + ID_B1 SINE B4 114 217 -7 6 1088 351 278 32 43 chrX 65930575 65930669 -100719627 - B4 SINE B4 -199 93 1 6 1088 292 261 0 31 chrX 65930754 65930828 -100719468 + L2a LINE L2 3297 3419 -7 6 1088 240 35 0 0 chrX 65931897 65931926 -100718370 + (CGG)n Simple_repeat Simple_repeat 3 31 0 6 1088 24 53 0 0 chrX 65932101 65932139 -100718157 + GC_rich Low_complexity Low_complexity 1 38 0 6 1088 270 211 148 101 chrX 65934483 65934521 -100715775 - B2_Mm2 SINE B2 -9 186 10 6 1088 381 259 176 0 chrX 65934521 65934652 -100715644 - RSINE1 SINE B4 -1 164 11 6 1088 1205 34 7 0 chrX 65934710 65934856 -100715440 + B1_Mus2 SINE Alu 1 147 0 6 1088 481 230 20 0 chrX 65935453 65935553 -100714743 + PB1D9 SINE Alu 2 103 -17 6 1088 565 159 182 15 chrX 65936713 65936845 -100713451 - B3 SINE B2 -7 209 57 6 1088 198 71 0 0 chrX 65937099 65937127 -100713169 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1088 204 330 162 18 chrX 65937558 65937669 -100712627 - MIRb SINE MIR -115 153 27 6 1088 219 88 0 0 chrX 65938306 65938340 -100711956 + (TC)n Simple_repeat Simple_repeat 2 35 0 6 1088 358 302 126 17 chrX 65938507 65938682 -100711614 + MER3 DNA MER1_type 15 208 -1 6 1088 418 181 61 30 chrX 65938816 65938981 -100711315 + RMER17C LTR ERVK 101 270 -140 6 1088 222 118 0 0 chrX 65938981 65939015 -100711281 + (A)n Simple_repeat Simple_repeat 1 34 0 6 1088 52 30 0 0 chrX 65939420 65939486 -100710810 + AT_rich Low_complexity Low_complexity 1 66 0 6 1088 253 338 130 58 chrX 65939598 65939752 -100710544 - MTE-int LTR MaLR -517 1063 899 6 1088 212 136 0 43 chrX 65939989 65940035 -100710261 + T-rich Low_complexity Low_complexity 1 44 0 6 1088 201 333 11 33 chrX 65940075 65940165 -100710131 + L2c LINE L2 3070 3157 -230 6 1088 5716 36 40 0 chrX 65940685 65941377 -100708919 - L1Md_T LINE L1 0 6582 5863 6 1088 26 50 0 0 chrX 65941915 65941955 -100708341 + AT_rich Low_complexity Low_complexity 1 40 0 6 1088 366 353 86 24 chrX 65942248 65942457 -100707839 + L1MB8 LINE L1 5945 6166 -12 6 1088 408 318 115 40 chrX 65942870 65943070 -100707226 - B3A SINE B2 -1 215 1 6 1088 268 370 0 0 chrX 65943721 65943794 -100706502 + B2_Mm2 SINE B2 1 73 -122 6 1088 263 282 63 13 chrX 65943792 65943871 -100706425 + B3 SINE B2 94 176 -40 6 1088 186 191 0 0 chrX 65945253 65945295 -100705001 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1088 510 322 0 20 chrX 65945759 65945905 -100704391 + ID_B1 SINE B4 78 220 -4 6 1088 644 214 28 14 chrX 65945923 65946065 -100704231 + B1_Mur2 SINE Alu 1 144 -5 6 1088 25 65 0 0 chrX 65946072 65946118 -100704178 + AT_rich Low_complexity Low_complexity 1 46 0 6 1088 809 142 0 6 chrX 65946164 65946320 -100703976 + (TA)n Simple_repeat Simple_repeat 2 156 0 6 1088 262 89 57 38 chrX 65946890 65946995 -100703301 + (TATAA)n Simple_repeat Simple_repeat 1 107 0 6 1088 36 23 0 0 chrX 65947001 65947044 -100703252 + AT_rich Low_complexity Low_complexity 1 43 0 6 1088 442 281 0 24 chrX 65947137 65947261 -100703035 + RSINE1 SINE B4 17 137 -28 6 1088 538 279 15 7 chrX 65948457 65948594 -100701702 + ID_B1 SINE B4 82 219 -5 6 1088 1197 49 0 0 chrX 65948847 65948991 -100701305 + B1_Mus1 SINE Alu 5 148 0 6 1088 208 217 33 0 chrX 65949048 65949108 -100701188 + (TA)n Simple_repeat Simple_repeat 1 62 0 6 1088 1783 76 0 0 chrX 65949394 65949630 -100700666 - L1_Mus1 LINE L1 -236 6331 6096 6 1088 1738 66 0 13 chrX 65949630 65949860 -100700436 + L1_Mus1 LINE L1 6340 6566 -1 6 1088 268 300 35 81 chrX 65950406 65950493 -100699803 + B1_Mus2 SINE Alu 1 83 -64 6 1088 1069 116 0 0 chrX 65954183 65954330 -100695966 + B1_Mus2 SINE Alu 1 147 0 6 1088 316 253 25 25 chrX 65954511 65954592 -100695704 + PB1D10 SINE Alu 30 110 -7 6 1088 25 31 0 0 chrX 65956680 65956712 -100693584 + AT_rich Low_complexity Low_complexity 1 32 0 6 1088 878 159 7 0 chrX 65957174 65957312 -100692984 - B1_Mus1 SINE Alu 0 148 10 6 1088 379 240 18 83 chrX 65957219 65957328 -100692968 - MT2B LTR ERVL -344 257 156 6 1088 358 215 0 92 chrX 65957842 65957929 -100692367 - B3A SINE B2 -119 79 1 6 1088 1248 103 6 6 chrX 65957967 65958142 -100692154 + B2_Mm1t SINE B2 1 175 -18 6 1088 231 242 2 0 chrX 65959546 65959608 -100690688 + L2c LINE L2 3258 3341 -85 6 1088 399 173 0 0 chrX 65961522 65961603 -100688693 + (TA)n Simple_repeat Simple_repeat 1 81 0 6 1088 297 128 0 0 chrX 65961645 65961692 -100688604 + (TA)n Simple_repeat Simple_repeat 2 48 0 6 1088 279 114 0 0 chrX 65965536 65965580 -100684716 + (GGA)n Simple_repeat Simple_repeat 1 44 0 6 1088 624 296 35 0 chrX 65965612 65965754 -100684542 + RSINE1 SINE B4 4 150 -15 6 1088 206 163 0 20 chrX 65965773 65965823 -100684473 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 6 1088 1056 56 35 14 chrX 65965823 65965968 -100684328 - B1_Mus1 SINE Alu 0 148 1 6 1088 436 278 67 51 chrX 65967000 65967178 -100683118 - MIRb SINE MIR -38 230 50 6 1088 1178 75 0 0 chrX 65967246 65967393 -100682903 + B1_Mus1 SINE Alu 2 148 0 6 1088 766 207 120 6 chrX 65967797 65967972 -100682324 - B3 SINE B2 -21 195 1 6 1088 409 182 51 13 chrX 65968507 65968585 -100681711 - PB1D9 SINE Alu 0 120 40 6 1088 22 0 0 0 chrX 65970150 65970172 -100680124 + AT_rich Low_complexity Low_complexity 1 22 0 6 1088 736 234 31 41 chrX 65971251 65971447 -100678849 - B3A SINE B2 0 198 5 6 1088 360 0 0 0 chrX 65971851 65971891 -100678405 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1088 456 269 67 8 chrX 65971892 65972012 -100678284 - RSINE1 SINE B4 -20 145 19 6 1088 1257 283 149 40 chrX 65972069 65972698 -100677598 - Lx8 LINE L1 -74 7399 6702 6 1088 465 309 55 12 chrX 65974339 65974503 -100675793 + ID_B1 SINE B4 1 171 -53 6 1088 1108 83 0 0 chrX 65974543 65974688 -100675608 + B1_Mus2 SINE Alu 1 145 -2 6 1088 589 174 258 22 chrX 65975089 65975271 -100675025 + URR1B DNA MER1_type 1 225 0 6 1088 1889 232 48 52 chrX 65975387 65975567 -100674729 - Lx9 LINE L1 -827 6817 6637 6 1088 2584 43 0 3 chrX 65975567 65975890 -100674406 + L1_Mus1 LINE L1 6246 6567 0 6 1088 1889 232 48 52 chrX 65975890 65976227 -100674069 - Lx9 LINE L1 -1008 6636 6303 6 1088 29 28 0 0 chrX 65976253 65976289 -100674007 + AT_rich Low_complexity Low_complexity 1 36 0 6 1088 1117 68 0 0 chrX 65976289 65976435 -100673861 - B1_Mus1 SINE Alu 0 148 3 6 1088 2455 258 41 7 chrX 65976461 65977043 -100673253 - Lx5 LINE L1 -46 7414 6473 6 1088 1158 68 0 0 chrX 65977043 65977190 -100673106 - B1_Mus2 SINE Alu 0 147 1 6 1088 1969 267 215 13 chrX 65977190 65977749 -100672547 - Lx5 LINE L1 -655 6805 5920 6 1088 1480 265 53 32 chrX 65977846 65978279 -100672017 + Lx9 LINE L1 7099 7536 -108 6 1088 1792 148 88 64 chrX 65978279 65978654 -100671642 - ORR1C2 LTR MaLR 0 384 1 6 1088 1480 265 53 32 chrX 65978654 65978751 -100671545 + Lx9 LINE L1 7537 7640 -4 6 1088 185 59 59 0 chrX 65978755 65978789 -100671507 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 6 1088 2596 269 41 32 chrX 65978790 65979256 -100671040 - Lx8 LINE L1 -9 7464 6996 6 1088 2013 152 86 18 chrX 65979256 65979650 -100670646 - MTC LTR MaLR 0 421 1 6 1088 2596 269 41 32 chrX 65979650 65979965 -100670331 - Lx8 LINE L1 -478 6995 6676 6 1088 750 181 50 14 chrX 65979989 65980129 -100670167 - B1_Mur2 SINE Alu -2 147 3 6 1088 524 308 82 116 chrX 65980192 65980290 -100670006 + B4A SINE B4 1 88 -204 6 1088 1175 133 74 204 chrX 65980290 65980761 -100669535 - RMER17C LTR ERVK 0 410 1 6 1088 524 308 82 116 chrX 65980761 65980956 -100669340 + B4A SINE B4 89 284 -8 6 1088 378 0 0 0 chrX 65980988 65981030 -100669266 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1088 242 191 111 0 chrX 65981032 65981095 -100669201 + L1M1 LINE L1 5476 5545 -755 6 1088 314 255 41 41 chrX 65981114 65981261 -100669035 + L1M1 LINE L1 5599 5745 -555 6 1088 263 317 131 24 chrX 65981754 65981922 -100668374 - LTR50 LTR ERVL -340 455 270 6 1088 343 239 142 25 chrX 65981923 65982043 -100668253 - LTR50 LTR ERVL -628 167 34 6 1088 1580 259 83 0 chrX 65982062 65982436 -100667860 + MTD LTR MaLR 13 417 -2 6 1088 306 212 136 0 chrX 65983562 65983628 -100666668 + ID2 SINE ID 3 77 -6 6 1088 324 359 84 7 chrX 65983681 65983835 -100666461 - LTR16B LTR ERVL -7 456 291 6 1088 253 228 91 71 chrX 65984183 65984282 -100666014 + B3 SINE B2 116 216 0 6 1088 7944 56 2 9 chrX 65984345 65986039 -100664257 - L1Md_F2 LINE L1 -8 6574 4894 6 1088 395 253 11 11 chrX 65986055 65986143 -100664153 + B1_Mur2 SINE Alu 49 136 -13 6 1088 583 333 85 39 chrX 65986385 65986691 -100663605 - MER44A DNA MER2_type 0 339 20 6 1088 198 0 0 0 chrX 65987398 65987420 -100662876 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1088 2023 343 118 54 chrX 65987420 65988811 -100661485 + MTE-int LTR MaLR 6 1485 -95 6 1088 342 332 88 77 chrX 65988992 65989253 -100661043 + ORR1E LTR MaLR 96 359 0 7 1088 2382 43 20 3 chrX 65989384 65989687 -100660609 + L1_Mus1 LINE L1 6260 6567 0 7 1088 662 275 0 0 chrX 65989703 65989841 -100660455 + B1_Mur1 SINE Alu 7 144 -5 7 1088 243 354 34 13 chrX 65990176 65990325 -100659971 + L1MC4 LINE L1 7394 7545 -497 7 1088 5344 185 41 26 chrX 65990335 65991421 -100658875 - RLTR25A LTR ERVK 0 1103 1 7 1088 629 278 101 0 chrX 65991427 65991675 -100658621 + L1MC4 LINE L1 7570 7842 -200 7 1088 642 351 26 13 chrX 65991675 65991903 -100658393 + Tigger5 DNA MER2_type 2 232 -2174 7 1088 728 296 0 15 chrX 65992074 65992280 -100658016 + B3 SINE B2 1 203 -13 7 1088 21 0 0 0 chrX 65992701 65992722 -100657574 + AT_rich Low_complexity Low_complexity 1 21 0 7 1088 1026 119 0 0 chrX 65993681 65993832 -100656464 - L1_Mur2 LINE L1 -1035 4842 4692 7 1088 1466 102 38 8 chrX 65993832 65994069 -100656227 + L1_Mus4 LINE L1 6386 6629 -7 7 1088 372 22 0 0 chrX 65994135 65994180 -100656116 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1088 652 242 90 11 chrX 65994184 65994372 -100655924 - MLT2C1 LTR ERVL -189 208 6 7 1088 216 44 89 0 chrX 65994933 65994978 -100655318 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 7 1088 213 94 0 0 chrX 65994982 65995014 -100655282 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 7 1088 233 29 29 0 chrX 65995290 65995324 -100654972 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1088 1222 60 0 0 chrX 65995362 65995530 -100654766 - L1_Mus2 LINE L1 -1 6565 6398 7 1088 714 23 0 0 chrX 65995532 65995618 -100654678 + L1_Mus2 LINE L1 6241 6326 -240 7 1088 446 312 27 41 chrX 65996051 65996198 -100654098 - ID_B1 SINE B4 -2 222 78 7 1088 1637 216 32 72 chrX 65996265 65996679 -100653617 - RLTR20B3 LTR ERVK -3 560 163 7 1088 1088 82 0 20 chrX 65996679 65996815 -100653481 + B1_Mus1 SINE Alu 2 136 -12 7 1088 387 0 0 0 chrX 65996815 65996858 -100653438 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 7 1088 1088 82 0 20 chrX 65996858 65996871 -100653425 + B1_Mus1 SINE Alu 137 148 0 7 1088 1637 220 40 75 chrX 65996871 65997028 -100653268 - RLTR20B3 LTR ERVK -394 169 1 7 1088 3326 306 46 22 chrX 65997028 65998176 -100652120 - Lx8 LINE L1 -50 7423 6248 7 1088 2158 134 43 14 chrX 65998219 65998567 -100651729 - ORR1B2 LTR MaLR -9 358 1 7 1088 530 250 182 0 chrX 65998567 65998699 -100651597 - RSINE1 SINE B4 -7 158 3 7 1088 216 228 0 0 chrX 65998826 65998883 -100651413 + (TA)n Simple_repeat Simple_repeat 2 58 0 7 1088 600 14 0 0 chrX 65999410 65999479 -100650817 + (GGAA)n Simple_repeat Simple_repeat 4 72 0 7 1088 459 255 59 71 chrX 65999515 65999684 -100650612 + ID_B1 SINE B4 58 224 0 7 1088 561 241 52 15 chrX 65999551 65999686 -100650610 + B1F SINE Alu 10 149 0 7 1088 735 315 116 48 chrX 66000445 66000782 -100649514 - ORR1A1 LTR MaLR -17 362 3 1 1088 326 359 62 27 chrX 66000789 66000935 -100649361 - ORR1A1-int LTR MaLR -5 1575 1425 1 1088 1038 264 6 31 chrX 66000965 66001290 -100649006 - Lx9 LINE L1 -541 7103 6787 2 1088 2730 182 45 0 chrX 66001672 66002177 -100648119 - RLTR11A LTR ERVK 0 528 1 3 1088 8716 65 1 2 chrX 66002800 66003976 -100646320 + ORR1A1-int LTR MaLR 565 1739 -53 4 1088 1839 112 35 14 chrX 66003976 66004266 -100646030 + Lx LINE L1 6357 6652 -2 5 1088 1561 193 57 3 chrX 66004267 66004479 -100645817 + RLTR20C LTR ERVK 218 432 -102 6 1088 345 24 0 0 chrX 66004479 66004521 -100645775 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1088 1561 193 57 3 chrX 66004521 66004609 -100645687 + RLTR20C LTR ERVK 433 533 -1 6 1088 1953 194 49 11 chrX 66004743 66005113 -100645183 - ORR1C2 LTR MaLR 0 384 1 8 1088 233 310 56 22 chrX 66005131 66005220 -100645076 + ORR1D2 LTR MaLR 279 370 0 9 1088 1667 157 61 73 chrX 66005303 66005646 -100644650 + ORR1C1 LTR MaLR 1 339 -39 1 1088 1591 139 64 9 chrX 66005619 66005975 -100644321 - MT2B2 LTR ERVL -175 426 53 1 1088 3444 141 11 7 chrX 66005977 66006534 -100643762 - ORR1A1-int LTR MaLR -1403 560 2 1 1088 372 43 0 0 chrX 66006539 66006586 -100643710 - ORR1A1 LTR MaLR -8 318 272 1 1088 25676 73 2 4 chrX 66006586 66010881 -100639415 - L1Md_F2 LINE L1 -5 6577 2289 1 1088 933 177 11 17 chrX 66010901 66011079 -100639217 - ORR1A1 LTR MaLR -167 179 3 1 1088 257 330 46 19 chrX 66011734 66011842 -100638454 + LTR40a LTR ERVL 402 512 -7 1 1088 7428 34 2 0 chrX 66012724 66013644 -100636652 - L1Md_T LINE L1 0 6582 5661 1 1088 7185 15 0 0 chrX 66013642 66014500 -100635796 + L1Md_T LINE L1 4789 5646 -237 1 1088 541 209 0 0 chrX 66014862 66014953 -100635343 - BC1_Mm scRNA scRNA -61 91 1 1 1088 262 219 64 96 chrX 66015602 66015719 -100634577 - B3A SINE B2 -104 112 1 1 1088 38 61 0 0 chrX 66015756 66015822 -100634474 + AT_rich Low_complexity Low_complexity 1 66 0 1 1088 32 26 0 0 chrX 66015876 66015915 -100634381 + AT_rich Low_complexity Low_complexity 1 39 0 1 1088 528 290 11 90 chrX 66015994 66016172 -100634124 - RSINE1 SINE B4 0 165 2 1 1088 254 277 234 0 chrX 66017267 66017408 -100632888 + MIRb SINE MIR 39 212 -56 2 1088 35 0 0 0 chrX 66018223 66018258 -100632038 + AT_rich Low_complexity Low_complexity 1 35 0 2 1088 1161 68 0 0 chrX 66018308 66018454 -100631842 - B1_Mus2 SINE Alu 0 147 2 2 1088 815 290 9 14 chrX 66018541 66018758 -100631538 - ID_B1 SINE B4 -7 217 2 2 1088 396 205 54 96 chrX 66018888 66018940 -100631356 + L1MA5 LINE L1 6138 6198 -102 2 1088 334 85 17 17 chrX 66018940 66019000 -100631296 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 1088 396 205 54 96 chrX 66019000 66019114 -100631182 + L1MA5 LINE L1 6199 6297 -3 2 1088 629 296 52 26 chrX 66019357 66019518 -100630778 - B3A SINE B2 -2 196 33 2 1088 8229 35 6 0 chrX 66019518 66020490 -100629806 + RLTR13A3 LTR ERVK 1 978 0 2 1088 629 296 52 26 chrX 66020490 66020519 -100629777 - B3A SINE B2 -166 32 1 2 1088 1347 172 81 76 chrX 66020620 66020961 -100629335 - RMER17C LTR ERVK 0 410 73 2 1088 3292 37 5 5 chrX 66020961 66021367 -100628929 - L1Md_F3 LINE L1 -3 6581 6176 2 1088 1347 172 81 76 chrX 66021367 66021433 -100628863 - RMER17C LTR ERVK -338 72 3 2 1088 257 287 35 0 chrX 66021530 66021617 -100628679 - L1_Rod LINE L1 -3 5844 5755 3 1088 664 281 72 0 chrX 66021722 66021801 -100628495 + ID_B1 SINE B4 3 92 -132 3 1088 306 250 186 10 chrX 66021801 66021898 -100628398 + PB1D10 SINE Alu 1 114 -3 3 1088 22 0 0 0 chrX 66022008 66022030 -100628266 + AT_rich Low_complexity Low_complexity 1 22 0 3 1088 501 326 7 7 chrX 66023287 66023429 -100626867 - ID_B1 SINE B4 -1 223 82 3 1088 412 307 190 14 chrX 66023595 66023737 -100626559 - ID_B1 SINE B4 -38 186 20 3 1088 1495 47 5 20 chrX 66023958 66024154 -100626142 - B2_Mm1t SINE B2 0 193 1 3 1088 1390 66 5 5 chrX 66024212 66024396 -100625900 + B2_Mm2 SINE B2 2 185 -10 3 1088 351 0 0 0 chrX 66025404 66025443 -100624853 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 1088 298 301 25 50 chrX 66026049 66026168 -100624128 - B1F SINE Alu 0 149 34 3 1088 256 344 10 41 chrX 66026400 66026497 -100623799 - B4A SINE B4 -168 124 31 4 1088 227 260 0 0 chrX 66026531 66026581 -100623715 + CT-rich Low_complexity Low_complexity 2 51 0 4 1088 741 280 25 10 chrX 66026632 66026834 -100623462 - B3 SINE B2 -11 205 1 4 1088 263 325 49 12 chrX 66027655 66027736 -100622560 + B3A SINE B2 88 171 -27 4 1088 5137 45 0 27 chrX 66027939 66028595 -100621701 - L1_Mus1 LINE L1 0 6567 5930 4 1088 4856 98 2 56 chrX 66028595 66028956 -100621340 + L1_Mus1 LINE L1 5132 5462 -421 4 1088 8381 36 0 2 chrX 66028956 66029954 -100620342 + L1Md_F2 LINE L1 5587 6582 0 4 1088 4856 58 1 16 chrX 66029954 66030428 -100619868 + L1_Mus1 LINE L1 5463 5925 -642 4 1088 261 288 13 27 chrX 66030772 66030847 -100619449 - B3A SINE B2 -11 187 114 4 1088 608 325 16 39 chrX 66030790 66031046 -100619250 - B4A SINE B4 0 292 43 4 1088 1310 110 23 5 chrX 66032364 66032583 -100617713 - Lx2 LINE L1 0 6997 6775 4 1088 5793 120 3 29 chrX 66032580 66033549 -100616747 - Lx2 LINE L1 -351 6646 5703 4 1088 8463 94 13 7 chrX 66033547 66034897 -100615399 - L1VL4 LINE L1 -1011 2548 1191 5 1088 21 0 0 0 chrX 66035134 66035155 -100615141 + AT_rich Low_complexity Low_complexity 1 21 0 5 1088 2803 33 3 0 chrX 66035265 66035598 -100614698 - L1Md_F2 LINE L1 0 6582 6249 5 1088 4901 82 33 9 chrX 66036094 66037081 -100613215 - L1VL4 LINE L1 -2351 1208 193 5 1088 210 320 86 0 chrX 66037354 66037482 -100612814 + L2 LINE L2 1987 2125 -1294 5 1088 342 221 0 0 chrX 66037507 66037575 -100612721 - ID4 SINE ID -11 72 5 5 1088 1661 168 80 6 chrX 66037579 66037915 -100612381 - RLTR18 LTR ERVK -253 363 3 5 1088 1586 164 174 18 chrX 66038762 66038817 -100611479 - L1_Mur3 LINE L1 -2661 3219 3137 5 1088 231 36 0 0 chrX 66038817 66038845 -100611451 + (TGG)n Simple_repeat Simple_repeat 1 28 0 5 1088 1586 164 174 18 chrX 66038845 66039237 -100611059 - L1_Mur3 LINE L1 -2744 3136 2703 5 1088 1099 222 81 28 chrX 66039238 66039521 -100610775 - MTD LTR MaLR 0 419 122 5 1088 8669 95 27 22 chrX 66039545 66041187 -100609109 - Lx3C LINE L1 -1 6975 5293 5 1088 7306 80 16 42 chrX 66041187 66042237 -100608059 - RLTR13D5 LTR ERVK 0 1023 1 6 1088 5631 94 8 52 chrX 66042237 66042306 -100607990 - Lx3C LINE L1 -594 5292 5247 5 1088 2151 167 20 8 chrX 66042306 66042699 -100607597 - Lx2 LINE L1 -4 6993 6596 6 1088 5631 94 8 52 chrX 66042699 66042974 -100607322 - Lx3C LINE L1 -640 5246 4988 5 1088 27964 93 10 4 chrX 66042977 66044362 -100605934 - L1_Mus3 LINE L1 0 6638 5249 6 1088 180 0 0 0 chrX 66044362 66044382 -100605914 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 1088 27964 110 20 12 chrX 66044382 66046426 -100603870 - L1_Mus3 LINE L1 -635 5248 3184 6 1088 259 25 50 0 chrX 66046426 66046466 -100603830 + (CAAAA)n Simple_repeat Simple_repeat 1 42 0 6 1088 27964 110 20 12 chrX 66046466 66048056 -100602240 - L1_Mus3 LINE L1 -2700 3183 1573 6 1088 1238 41 0 0 chrX 66048056 66048203 -100602093 - B1_Mus2 SINE Alu 0 147 1 6 1088 27964 106 14 42 chrX 66048203 66049402 -100600894 - L1_Mus3 LINE L1 -4311 1572 409 6 1088 6043 122 40 20 chrX 66049403 66050486 -100599810 - Lx3C LINE L1 -882 5004 3901 5 1088 422 178 209 0 chrX 66050611 66050740 -100599556 - Lx3C LINE L1 -6150 834 679 5 1088 584 175 51 7 chrX 66050771 66050909 -100599387 - Lx2B LINE L1 -6 6994 6851 6 1088 442 239 42 97 chrX 66050909 66051053 -100599243 - MTD LTR MaLR -283 136 1 5 1088 955 93 210 6 chrX 66051330 66051492 -100598804 - B2_Mm2 SINE B2 0 195 1 6 1088 437 304 146 39 chrX 66051714 66051892 -100598404 - B3A SINE B2 -1 197 1 6 1088 672 346 44 47 chrX 66052015 66052498 -100597798 - MT2A LTR ERVL -7 594 1 6 1088 620 242 0 64 chrX 66053213 66053225 -100597071 - B1_Mur1 SINE Alu 0 149 138 7 1088 450 0 0 0 chrX 66053225 66053275 -100597021 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 7 1088 620 242 0 64 chrX 66053275 66053403 -100596893 - B1_Mur1 SINE Alu -12 137 18 7 1088 225 0 0 0 chrX 66053432 66053457 -100596839 + (T)n Simple_repeat Simple_repeat 1 25 0 7 1088 222 174 0 0 chrX 66053911 66053946 -100596350 + polypyrimidine Low_complexity Low_complexity 13 47 0 7 1088 189 0 0 0 chrX 66053946 66053967 -100596329 + (TG)n Simple_repeat Simple_repeat 2 22 0 7 1088 414 0 0 0 chrX 66054321 66054367 -100595929 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1088 421 294 27 61 chrX 66054367 66054628 -100595668 - Lx9 LINE L1 -181 7463 7212 7 1088 439 232 0 40 chrX 66054628 66054727 -100595569 - B4A SINE B4 -196 96 2 7 1088 23 68 0 0 chrX 66054907 66054951 -100595345 + AT_rich Low_complexity Low_complexity 1 44 0 7 1088 583 311 57 4 chrX 66054967 66055196 -100595100 + MER46C DNA MER2_type 80 320 -18 7 1088 388 300 69 57 chrX 66055847 66056051 -100594245 + MIR SINE MIR 46 257 -11 8 1088 32 43 0 0 chrX 66056088 66056134 -100594162 + AT_rich Low_complexity Low_complexity 1 46 0 8 1088 218 297 106 40 chrX 66056191 66056342 -100593954 + MIRb SINE MIR 78 238 -30 8 1088 365 103 0 79 chrX 66056995 66057058 -100593238 - B1_Mur4 SINE Alu -1 149 92 8 1088 549 268 126 69 chrX 66057780 66058041 -100592255 + B4A SINE B4 1 276 -16 8 1088 268 327 48 55 chrX 66058152 66058317 -100591979 - RMER13A LTR ERVK 0 860 697 8 1088 1162 236 127 112 chrX 66058362 66058935 -100591361 - RMER13A LTR ERVK -278 582 1 8 16 8056 135 13 30 chrX 66059461 66061409 -100588887 + Lx2 LINE L1 5076 6996 -1 8 1089 2446 58 12 12 chrX 66061551 66061884 -100588412 - MTA_Mm LTR MaLR -63 333 1 8 1089 3163 62 26 0 chrX 66062056 66062472 -100587824 - MT2C_Mm LTR ERVL 0 475 49 8 1089 21 36 0 0 chrX 66062551 66062579 -100587717 + AT_rich Low_complexity Low_complexity 1 28 0 8 1089 1002 66 72 7 chrX 66062581 66062719 -100587577 + B1_Mus1 SINE Alu 2 148 0 9 1089 211 0 28 56 chrX 66062992 66063028 -100587268 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 9 1089 1138 82 0 0 chrX 66063049 66063196 -100587100 - B1_Mus2 SINE Alu 0 147 1 9 1089 525 0 0 0 chrX 66063348 66063408 -100586888 + RLTR13B3 LTR ERVK 1 60 -869 9 1089 2557 35 0 0 chrX 66063408 66063725 -100586571 - L1Md_F2 LINE L1 -278 5605 5289 9 1089 8277 40 1 2 chrX 66063725 66064716 -100585580 + L1Md_F2 LINE L1 5591 6580 -2 9 1089 7576 18 0 0 chrX 66064724 66065609 -100584687 + RLTR13B3 LTR ERVK 45 929 0 9 1089 369 0 0 0 chrX 66065690 66065731 -100584565 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 1089 403 290 32 0 chrX 66066201 66066294 -100584002 - ORR1E LTR MaLR -261 98 3 9 1089 254 149 127 56 chrX 66066434 66066505 -100583791 + B3A SINE B2 2 77 -121 9 1089 1532 159 8 0 chrX 66066505 66066763 -100583533 + Lx4A LINE L1 6219 6478 -580 9 1089 6475 46 30 0 chrX 66066791 66067598 -100582698 - L1Md_F2 LINE L1 -2 6580 5750 9 1089 4242 31 0 0 chrX 66067598 66068121 -100582175 + L1Md_F2 LINE L1 5220 5742 -141 9 1089 3284 97 140 8 chrX 66068121 66068643 -100581653 + Lx4A LINE L1 6464 7054 -4 9 1089 24 0 0 0 chrX 66068645 66068669 -100581627 + AT_rich Low_complexity Low_complexity 1 24 0 1 1089 418 188 106 0 chrX 66070135 66070220 -100580076 + RLTR20B1 LTR ERVK 1 94 -466 1 1089 384 194 0 53 chrX 66070172 66070248 -100580048 - RLTR20B2 LTR ERVK -372 188 117 1 1089 773 189 7 45 chrX 66070232 66070387 -100579909 + RLTR20B1 LTR ERVK 415 563 0 1 1089 726 257 96 101 chrX 66070507 66070706 -100579590 - B3 SINE B2 0 216 1 1 1089 320 319 17 42 chrX 66072466 66072584 -100577712 + Lx8 LINE L1 7155 7269 -204 1 1089 1530 162 72 10 chrX 66073012 66073317 -100576979 - Lx2A1 LINE L1 0 7008 6685 1 1089 4623 124 0 0 chrX 66073529 66074267 -100576029 + L1_Mus3 LINE L1 405 1121 -5863 1 1089 21314 115 19 8 chrX 66078499 66083872 -100566424 + L1_Mus3 LINE L1 1105 6634 -4 1 1089 1055 45 25 31 chrX 66083872 66084032 -100566264 + L1Md_F3 LINE L1 6426 6584 0 1 1089 323 261 69 0 chrX 66084290 66084420 -100565876 + L1MA4A LINE L1 4648 4786 -1357 1 1089 22 0 0 0 chrX 66084485 66084507 -100565789 + AT_rich Low_complexity Low_complexity 1 22 0 1 1089 237 234 112 78 chrX 66084670 66084786 -100565510 + PB1D9 SINE Alu 1 120 0 1 1089 317 310 52 37 chrX 66084807 66084941 -100565355 + L1MA4A LINE L1 5230 5365 -778 1 1089 254 95 24 0 chrX 66084942 66084984 -100565312 + (TTTTG)n Simple_repeat Simple_repeat 1 43 0 1 1089 719 287 37 16 chrX 66084984 66085368 -100564928 + L1MA4A LINE L1 5371 5789 -502 1 1089 3122 230 65 16 chrX 66085433 66086777 -100563519 - Lx5 LINE L1 -17 7033 5605 1 1089 252 231 157 0 chrX 66086764 66086898 -100563398 + L1MA4A LINE L1 5784 5938 -362 1 1089 3870 70 0 19 chrX 66086977 66087490 -100562806 + L1Md_F2 LINE L1 6079 6581 -1 1 1089 27 81 0 0 chrX 66087568 66087630 -100562666 + AT_rich Low_complexity Low_complexity 1 62 0 1 1089 551 264 61 20 chrX 66087665 66087812 -100562484 - RSINE1 SINE B4 -10 155 3 1 1089 906 316 90 3 chrX 66087992 66088369 -100561927 - L2 LINE L2 -1192 2227 1818 1 1089 509 269 131 6 chrX 66088509 66088677 -100561619 + MER5A DNA MER1_type 1 189 0 1 1089 182 324 0 56 chrX 66088806 66088914 -100561382 - L2 LINE L2 -1621 1798 1697 1 1089 235 275 130 0 chrX 66088948 66089017 -100561279 - L2 LINE L2 -1901 1518 1441 1 1089 352 294 162 38 chrX 66089023 66089503 -100560793 + L1MC4a LINE L1 5505 6044 -1838 1 1089 721 232 25 13 chrX 66089624 66089781 -100560515 - RSINE1 SINE B4 -2 163 5 1 1089 280 288 45 78 chrX 66089871 66090088 -100560208 - MTEa LTR MaLR -9 370 120 1 1089 701 303 93 13 chrX 66090172 66090724 -100559572 - L1MB7 LINE L1 -174 6005 5388 1 1089 277 221 51 34 chrX 66090913 66091030 -100559266 - L1MB7 LINE L1 -859 5287 5169 1 1089 886 245 54 20 chrX 66091037 66091073 -100559223 - B3 SINE B2 -5 211 176 1 1089 369 93 0 0 chrX 66091073 66091127 -100559169 + (CATA)n Simple_repeat Simple_repeat 2 55 0 1 1089 886 245 54 20 chrX 66091127 66091294 -100559002 - B3 SINE B2 -41 175 2 1 1089 227 325 80 22 chrX 66091527 66091801 -100558495 - L1MEg LINE L1 -5026 1058 769 1 1089 1093 155 57 0 chrX 66091865 66092058 -100558238 - Lx4B LINE L1 -7 7051 6848 1 1089 207 100 0 0 chrX 66092143 66092173 -100558123 + (A)n Simple_repeat Simple_repeat 1 30 0 1 1089 2300 131 23 20 chrX 66092174 66092565 -100557731 - Lx5 LINE L1 -452 6598 6207 1 1089 2126 201 28 2 chrX 66092639 66093067 -100557229 + Lx5 LINE L1 6612 7050 0 1 1089 492 232 48 0 chrX 66094023 66094148 -100556148 + MLT2B2 LTR ERVL 1 131 -384 1 1089 6679 126 9 2 chrX 66094153 66095468 -100554828 + Lx3B LINE L1 5325 6650 -323 1 1089 3992 180 50 39 chrX 66095469 66096323 -100553973 + RMER12 LTR ERVK 308 1171 -151 1 1089 1768 185 23 32 chrX 66096459 66096894 -100553402 + L1_Mur3 LINE L1 1560 1990 -3890 1 1089 3177 223 42 4 chrX 66096906 66097621 -100552675 + Lx6 LINE L1 6715 7456 -4 1 1089 667 235 6 64 chrX 66097867 66098040 -100552256 + RSINE1 SINE B4 3 165 0 1 1089 740 96 0 87 chrX 66098075 66098142 -100552154 + RMER16 LTR ERVK 419 479 -54 1 1089 3512 60 0 13 chrX 66098142 66098600 -100551696 - L1Md_F2 LINE L1 -1 6581 6130 1 1089 740 96 0 87 chrX 66098600 66098658 -100551638 + RMER16 LTR ERVK 480 533 0 1 1089 8615 106 31 37 chrX 66098658 66098793 -100551503 + RMER16-int LTR ERVK 1 122 -5284 1 1089 1029 70 0 7 chrX 66098793 66098936 -100551360 + L1_Mus1 LINE L1 6426 6567 0 1 1089 8615 106 31 37 chrX 66098936 66100250 -100550046 + RMER16-int LTR ERVK 123 1442 -3964 1 1089 2428 83 78 0 chrX 66100252 66100600 -100549696 + RMER16-int LTR ERVK 5032 5406 0 1 1089 2560 86 23 32 chrX 66100600 66101014 -100549282 + RMER16 LTR ERVK 1 452 -81 1 1089 393 22 0 0 chrX 66101317 66101363 -100548933 + (CAG)n Simple_repeat Simple_repeat 2 47 0 1 1089 1789 148 82 26 chrX 66101505 66101705 -100548591 - RMER17C LTR ERVK 0 410 203 1 1089 1001 126 0 11 chrX 66101705 66101881 -100548415 + (GGGGA)n Simple_repeat Simple_repeat 5 178 0 1 1089 1789 148 82 26 chrX 66101881 66102068 -100548228 - RMER17C LTR ERVK -208 202 1 1 1089 375 336 46 0 chrX 66102908 66103039 -100547257 + ID_B1 SINE B4 80 216 -8 1 1089 465 285 49 68 chrX 66103439 66103601 -100546695 - MER34A1 LTR ERV1 -414 173 15 1 1089 387 56 0 0 chrX 66104925 66104979 -100545317 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1089 351 136 37 0 chrX 66105598 66105679 -100544617 + Lx9 LINE L1 7554 7637 -7 1 1089 272 320 74 0 chrX 66105735 66105857 -100544439 + Lx9 LINE L1 6625 6755 -889 1 1089 885 66 0 8 chrX 66105879 66106001 -100544295 - B1_Mus1 SINE Alu -27 121 1 1 1089 642 89 27 0 chrX 66106621 66106733 -100543563 + (CA)n Simple_repeat Simple_repeat 1 115 0 1 1089 3495 28 0 0 chrX 66106838 66107234 -100543062 - MTA_Mm LTR MaLR 0 396 1 1 1089 1029 337 120 25 chrX 66107234 66107861 -100542435 - Lx9 LINE L1 -334 7310 6625 1 1089 1514 64 0 24 chrX 66108160 66108369 -100541927 + L1_Mus1 LINE L1 6364 6567 0 1 1089 16480 77 12 9 chrX 66108704 66110004 -100540292 - L1_Mus2 LINE L1 0 6566 5293 1 1089 1150 68 7 0 chrX 66110004 66110151 -100540145 - B1_Mus1 SINE Alu 0 148 1 1 1089 16480 109 5 33 chrX 66110151 66110849 -100539447 - L1_Mus2 LINE L1 -591 5292 4614 1 1089 2000 29 0 0 chrX 66110849 66111087 -100539209 - L1Md_A LINE L1 -1 6581 6344 1 1089 16606 116 14 18 chrX 66111087 66112507 -100537789 - L1_Mus2 LINE L1 -1270 4613 3212 1 1089 5364 48 0 0 chrX 66112507 66113157 -100537139 + L1Md_T LINE L1 5933 6582 0 1 1089 16606 116 14 18 chrX 66113157 66114392 -100535904 - L1_Mus2 LINE L1 -2672 3211 1958 1 1089 7068 63 0 1 chrX 66114382 66115310 -100534986 - L1_Mus1 LINE L1 0 6567 5641 1 1089 4750 141 14 11 chrX 66115310 66116724 -100533572 - L1_Mus2 LINE L1 -3858 2025 671 1 1089 1934 41 16 4 chrX 66116828 66117073 -100533223 - L1_Mus2 LINE L1 -18 6548 6301 1 1089 456 314 94 71 chrX 66117432 66117586 -100532710 + ORR1E LTR MaLR 1 157 -213 1 1089 414 259 55 9 chrX 66118794 66118903 -100531393 - MER20 DNA MER1_type -17 202 89 1 1089 789 285 249 69 chrX 66118903 66119224 -100531072 - MTEa LTR MaLR 0 379 1 1 1089 707 332 67 62 chrX 66119391 66119779 -100530517 + MLT1B LTR MaLR 1 390 0 1 1089 569 224 34 17 chrX 66120238 66120356 -100529940 + RSINE1 SINE B4 2 121 -44 1 1089 855 238 35 0 chrX 66120447 66120678 -100529618 - L1M2 LINE L1 -686 5626 5388 1 1089 830 291 17 11 chrX 66120715 66121029 -100529267 + L1MA7 LINE L1 5628 5947 -353 1 1089 459 266 60 55 chrX 66121092 66121287 -100529009 + L1MA7 LINE L1 6071 6276 -36 1 1089 1282 250 46 0 chrX 66121287 66121635 -100528661 - ORR1D2 LTR MaLR -2 368 5 1 1089 459 266 60 55 chrX 66121635 66121674 -100528622 + L1MA7 LINE L1 6277 6306 -6 1 1089 234 288 14 14 chrX 66122000 66122074 -100528222 - MLT1D LTR MaLR -424 81 8 1 1089 238 67 44 0 chrX 66122555 66122600 -100527696 + (CAA)n Simple_repeat Simple_repeat 2 48 0 1 1089 201 129 0 0 chrX 66122601 66122632 -100527664 + (CCA)n Simple_repeat Simple_repeat 1 31 0 1 1089 446 280 27 34 chrX 66122652 66122800 -100527496 + MLT1D LTR MaLR 80 226 -279 1 1089 919 293 98 10 chrX 66122807 66123104 -100527192 - MT2A LTR ERVL -2 531 209 1 1089 22 26 0 25 chrX 66123201 66123220 -100527076 + AT_rich Low_complexity Low_complexity 1 19 0 1 1089 455 293 29 77 chrX 66123220 66123427 -100526869 + B3A SINE B2 1 197 -1 1 1089 22 26 0 25 chrX 66123427 66123447 -100526849 + AT_rich Low_complexity Low_complexity 1 20 0 1 1089 283 222 47 47 chrX 66123661 66123746 -100526550 + B1F SINE Alu 20 104 -45 1 1089 248 244 42 53 chrX 66123891 66123986 -100526310 - B3A SINE B2 -1 197 104 1 1089 203 274 39 0 chrX 66124660 66124711 -100525585 + MIRm SINE MIR 104 156 -120 1 1089 342 0 0 0 chrX 66124776 66124814 -100525482 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 1 1089 317 256 13 13 chrX 66124959 66125038 -100525258 - ID4_ SINE ID -3 80 2 1 1089 22 0 0 0 chrX 66125242 66125264 -100525032 + AT_rich Low_complexity Low_complexity 1 22 0 1 1089 243 396 67 0 chrX 66125652 66125816 -100524480 + MIR3 SINE MIR 17 191 -17 1 1089 262 161 0 31 chrX 66126808 66126872 -100523424 - L1MC LINE L1 -2210 3936 3875 1 1089 36739 34 1 2 chrX 66126938 66132412 -100517884 - L1Md_T LINE L1 -1 6581 1108 1 1089 4886 104 63 0 chrX 66132380 66133142 -100517154 - L1Md_T LINE L1 -5411 1205 396 1 1089 4981 73 12 3 chrX 66133140 66133831 -100516465 - L1Md_F2 LINE L1 -22 6560 5864 1 1089 396 250 15 8 chrX 66134344 66134477 -100515819 - Lx9 LINE L1 -9 7635 7502 1 1089 211 182 0 0 chrX 66134494 66134527 -100515769 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1089 340 168 105 0 chrX 66134527 66134622 -100515674 - Lx9 LINE L1 -128 7516 7412 1 1089 230 141 156 0 chrX 66134664 66134728 -100515568 - Lx9 LINE L1 -199 7445 7372 1 1089 199 318 94 43 chrX 66135289 66135427 -100514869 + L2a LINE L2 3282 3426 0 1 1089 1499 259 166 10 chrX 66135950 66136473 -100513823 - Tigger15a DNA TcMar -85 630 26 1 1089 198 0 0 0 chrX 66137029 66137051 -100513245 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 1089 402 21 0 0 chrX 66137051 66137098 -100513198 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 1089 364 270 305 4 chrX 66137779 66138058 -100512238 + MLT1A0 LTR MaLR 1 363 -2 1 1089 563 326 17 11 chrX 66138239 66138419 -100511877 + B3A SINE B2 2 182 -16 1 1089 396 314 57 0 chrX 66138552 66138641 -100511655 + L1M5 LINE L1 3787 3885 -2261 1 1089 225 0 0 0 chrX 66138641 66138666 -100511630 + (CAA)n Simple_repeat Simple_repeat 2 26 0 1 1089 396 314 57 0 chrX 66138666 66138770 -100511526 + L1M5 LINE L1 3886 3990 -2156 1 1089 24 77 0 0 chrX 66138849 66138901 -100511395 + AT_rich Low_complexity Low_complexity 1 52 0 1 1089 1319 269 131 22 chrX 66139118 66139843 -100510453 + Lx7 LINE L1 6425 7228 -468 1 1089 207 0 0 0 chrX 66139907 66139930 -100510366 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1089 6132 127 18 20 chrX 66140014 66141022 -100509274 - Lx2 LINE L1 0 6997 5992 1 1089 6983 100 19 1 chrX 66141087 66142670 -100507626 - L1_Mus3 LINE L1 -27 6611 5001 1 1089 459 52 0 0 chrX 66142734 66142792 -100507504 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1089 253 281 0 30 chrX 66142801 66142867 -100507429 - B4A SINE B4 -23 269 206 2 1089 357 292 78 78 chrX 66143153 66143421 -100506875 - MER97c DNA MER1_type? -716 374 107 2 1089 545 167 43 3 chrX 66143842 66143925 -100506371 - RMER21B LTR ERV1 0 947 879 2 1089 2586 152 96 18 chrX 66143925 66144415 -100505881 - RLTR11A LTR ERVK 0 528 1 2 1089 4626 150 13 51 chrX 66144415 66145278 -100505018 - RMER21B LTR ERV1 -12 830 1 2 1089 1266 78 0 0 chrX 66146589 66146769 -100503527 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1089 389 326 53 21 chrX 66147927 66148115 -100502181 + L1MEc LINE L1 972 1165 -5235 2 1089 409 355 66 0 chrX 66149090 66149501 -100500795 + L1MEc LINE L1 3513 3950 -2369 2 1089 377 321 124 71 chrX 66149525 66149864 -100500432 - MLT1A0 LTR MaLR -8 357 1 2 1089 342 261 60 7 chrX 66149869 66150022 -100500274 + L1MEc LINE L1 3969 4124 -2189 2 1089 386 228 43 9 chrX 66150087 66150202 -100500094 + L1M4 LINE L1 50 168 -6374 2 1089 846 123 19 19 chrX 66150251 66150408 -100499888 - Lx2 LINE L1 0 6997 6841 2 1089 906 273 10 10 chrX 66150451 66150658 -100499638 + B3 SINE B2 2 208 -8 2 1089 407 198 0 0 chrX 66150678 66150759 -100499537 - Lx8 LINE L1 -616 6857 6777 2 1089 1245 171 14 5 chrX 66151513 66151730 -100498566 - URR1B DNA MER1_type 0 225 7 2 1089 9228 223 45 43 chrX 66151975 66154462 -100495834 + RodERV21-int LTR ERV1 219 2710 -2281 2 1089 3715 147 14 13 chrX 66154572 66154641 -100495655 - Lx2B LINE L1 -10 6990 6919 2 1089 3099 14 0 0 chrX 66154641 66154985 -100495311 - ORR1A0 LTR MaLR 0 346 3 2 1089 3715 147 14 13 chrX 66154985 66155536 -100494760 - Lx2B LINE L1 -82 6918 6369 2 1089 987 176 30 13 chrX 66155709 66155945 -100494351 - Lx7 LINE L1 -87 7609 7370 2 1089 319 129 163 12 chrX 66155941 66156027 -100494269 - L1_Mur3 LINE L1 -7 5873 5775 2 1089 316 182 0 0 chrX 66156184 66156239 -100494057 - HAL1-3A_ME LINE L1 -830 2028 1974 2 1089 3133 128 37 14 chrX 66156343 66156908 -100493388 - Lx2B LINE L1 -640 6360 5783 2 1089 32801 68 1 2 chrX 66156904 66162546 -100487750 - L1Md_F2 LINE L1 -1 6581 950 2 1089 498 69 11 11 chrX 66162546 66162634 -100487662 + L1Md_F2 LINE L1 6493 6580 -2 2 1089 5526 43 1 20 chrX 66162634 66163073 -100487223 - L1Md_F2 LINE L1 -5667 949 515 2 1089 3460 148 13 0 chrX 66163074 66163669 -100486627 - Lx2B LINE L1 -88 5798 5196 2 1089 773 132 31 0 chrX 66163665 66163794 -100486502 + L1_Mur2 LINE L1 4171 4303 -1574 2 1089 23 0 0 0 chrX 66163802 66163825 -100486471 + AT_rich Low_complexity Low_complexity 1 23 0 2 1089 1107 50 43 0 chrX 66163825 66163966 -100486330 - B1_Mus2 SINE Alu 0 147 1 2 1089 4455 34 8 0 chrX 66164232 66164798 -100485498 + L1Md_F3 LINE L1 6049 6584 0 2 1089 9075 191 34 67 chrX 66164896 66166998 -100483298 + RodERV21-int LTR ERV1 2794 4826 -165 2 1089 368 278 41 0 chrX 66166998 66167095 -100483201 + RMER4B LTR ERVK 345 445 -140 2 1089 449 137 30 233 chrX 66167127 66167214 -100483082 + RMER21B LTR ERV1 1 77 -765 2 1089 3865 103 45 32 chrX 66167214 66167814 -100482482 + Lx LINE L1 6043 6650 -4 2 1089 449 137 30 233 chrX 66167814 66167859 -100482437 + RMER21B LTR ERV1 78 106 -736 2 1089 324 309 81 0 chrX 66167871 66167994 -100482302 - Lx8 LINE L1 -1098 6375 6243 2 1089 635 145 0 0 chrX 66167991 66168122 -100482174 + Lx2 LINE L1 6823 6953 -44 2 1089 2141 176 16 0 chrX 66168122 66168502 -100481794 - Lx5 LINE L1 -98 6952 6567 2 1089 333 323 77 0 chrX 66168489 66168619 -100481677 - Lx8 LINE L1 -92 7381 7242 2 1089 397 276 122 6 chrX 66168639 66168803 -100481493 - B3A SINE B2 -15 183 1 2 1089 226 233 54 14 chrX 66168876 66168950 -100481346 - Lx8 LINE L1 -1721 5752 5676 2 1089 231 197 49 0 chrX 66168950 66169011 -100481285 - L1MD LINE L1 -746 5400 5337 2 1089 256 373 36 39 chrX 66169024 66169359 -100480937 + L1MD2 LINE L1 5971 6304 -55 2 1089 674 347 61 32 chrX 66169640 66169747 -100480549 - ORR1E LTR MaLR -36 323 208 2 1089 5580 106 4 3 chrX 66169747 66170523 -100479773 - Lx2A LINE L1 -5 7003 6227 2 1089 674 347 61 32 chrX 66170523 66170728 -100479568 - ORR1E LTR MaLR -152 207 2 2 1089 1474 117 0 0 chrX 66170969 66171199 -100479097 + L1_Mur1 LINE L1 4949 5178 -708 2 1089 4655 146 70 18 chrX 66171200 66172024 -100478272 + Lx3C LINE L1 6099 6965 -11 2 1089 405 0 0 0 chrX 66172027 66172072 -100478224 + (CTA)n Simple_repeat Simple_repeat 2 46 0 2 1089 896 252 142 64 chrX 66172072 66172532 -100477764 + RMER4B LTR ERVK 17 588 -23 2 1089 358 270 99 28 chrX 66173234 66173375 -100476921 - L1MC4a LINE L1 -6 7876 7726 2 1089 230 324 15 0 chrX 66173689 66173757 -100476539 + PB1 SINE Alu 40 108 -19 2 1089 344 250 37 59 chrX 66174087 66174223 -100476073 - MIR SINE MIR -69 193 61 2 1089 320 265 40 30 chrX 66175295 66175396 -100474900 - L1MD2 LINE L1 -336 6023 5922 2 1089 760 275 60 0 chrX 66175401 66175601 -100474695 - B3 SINE B2 -4 212 1 2 1089 267 282 56 20 chrX 66175601 66175762 -100474534 - L1ME1 LINE L1 -403 5956 5791 2 1089 315 288 67 12 chrX 66175852 66176017 -100474279 - L1ME1 LINE L1 -730 5629 5456 2 1089 37 0 0 0 chrX 66176041 66176078 -100474218 + AT_rich Low_complexity Low_complexity 1 37 0 2 1089 380 223 19 0 chrX 66176098 66176201 -100474095 - L1ME1 LINE L1 -811 5431 5327 2 1089 245 232 0 0 chrX 66176242 66176298 -100473998 + L1MC4a LINE L1 7698 7753 -129 2 1089 2848 57 3 8 chrX 66177388 66177757 -100472539 - L1Md_F2 LINE L1 -12 6570 6204 2 1089 290 252 9 112 chrX 66179234 66179350 -100470946 + MER57C2 LTR ERV1 331 434 0 2 1089 250 273 69 133 chrX 66179350 66179523 -100470773 + MIR SINE MIR 96 257 -5 2 1089 297 295 13 0 chrX 66180456 66180534 -100469762 + ID4_ SINE ID 3 81 -2 2 1089 324 70 0 0 chrX 66180537 66180580 -100469716 + (GA)n Simple_repeat Simple_repeat 1 43 0 2 1089 479 260 171 0 chrX 66180673 66180796 -100469500 + B1F SINE Alu 6 149 0 2 1089 264 299 13 13 chrX 66181787 66181865 -100468431 - ID4 SINE ID -3 80 3 2 1089 24 32 0 0 chrX 66182008 66182039 -100468257 + AT_rich Low_complexity Low_complexity 1 31 0 2 1089 351 0 0 0 chrX 66182138 66182177 -100468119 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 1089 1033 121 6 6 chrX 66182177 66182352 -100467944 + (GGAGAA)n Simple_repeat Simple_repeat 6 180 0 2 1089 23 68 0 0 chrX 66182698 66182742 -100467554 + AT_rich Low_complexity Low_complexity 1 44 0 2 1089 13928 59 68 1 chrX 66182902 66185569 -100464727 - L1Md_F2 LINE L1 -2 6580 3736 2 1089 4259 125 15 20 chrX 66185551 66186826 -100463470 - L1Md_F2 LINE L1 -4171 1712 446 2 1089 392 273 103 40 chrX 66187512 66187638 -100462658 - B4 SINE B4 -114 178 45 2 1089 362 214 28 28 chrX 66187614 66187686 -100462610 - B1F SINE Alu -75 74 3 2 1089 5402 55 0 6 chrX 66187809 66188511 -100461785 + L1_Mm LINE L1 4886 5586 -297 2 1089 8245 39 0 2 chrX 66188511 66189496 -100460800 + L1Md_F2 LINE L1 5587 6569 -13 2 1089 5402 55 0 6 chrX 66189496 66189508 -100460788 + L1_Mm LINE L1 5587 5596 -287 2 136 5971 128 9 37 chrX 66190076 66191575 -100458721 - L1_Mur2 LINE L1 -427 3487 2120 2 1090 747 336 84 69 chrX 66191575 66192025 -100458271 + MLT1E2 LTR MaLR 171 627 0 2 1090 380 294 21 56 chrX 66192397 66192541 -100457755 - MLT2D LTR ERVL -2 558 420 2 1090 1114 292 23 7 chrX 66192567 66192867 -100457429 - MTE2b LTR MaLR -2 377 73 2 1090 331 329 76 14 chrX 66192875 66193020 -100457276 + MTEa LTR MaLR 2 155 -224 2 1090 468 0 0 0 chrX 66193054 66193106 -100457190 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1090 435 335 18 18 chrX 66193116 66193283 -100457013 + MT2A LTR ERVL 233 399 -134 2 1090 492 18 0 0 chrX 66193338 66193395 -100456901 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1090 359 233 45 23 chrX 66193410 66193498 -100456798 - MTE2b LTR MaLR -289 90 1 2 1090 403 299 26 33 chrX 66193503 66193648 -100456648 - MLT2D LTR ERVL -183 231 88 2 1090 239 0 32 0 chrX 66193648 66193679 -100456617 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 1090 7513 104 18 4 chrX 66194167 66194348 -100455948 + L1_Mus1 LINE L1 4707 4888 -995 2 1090 3730 68 41 0 chrX 66194348 66194831 -100455465 - L1_Mus1 LINE L1 0 6567 6065 2 1090 7513 91 10 2 chrX 66194831 66196484 -100453812 + L1_Mus1 LINE L1 4889 6561 -6 2 1090 4183 94 82 2 chrX 66196484 66197114 -100453182 + L1_Mus3 LINE L1 5957 6637 -1 2 1090 414 0 0 0 chrX 66197168 66197214 -100453082 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1090 192 299 30 0 chrX 66197316 66197383 -100452913 + MIRb SINE MIR 200 268 0 2 1090 488 97 0 0 chrX 66197863 66197935 -100452361 - L1_Mus2 LINE L1 0 6566 6495 2 1090 241 333 150 8 chrX 66201717 66201850 -100448446 + MIR SINE MIR 81 232 -30 2 1090 253 283 22 34 chrX 66202095 66202274 -100448022 + Lx9 LINE L1 7464 7640 -4 2 1090 185 310 35 0 chrX 66202283 66202341 -100447955 - L2 LINE L2 -2357 1062 1003 2 1090 404 275 56 35 chrX 66202432 66202575 -100447721 - Lx9 LINE L1 -328 7316 7171 2 1090 22 0 0 0 chrX 66202630 66202652 -100447644 + AT_rich Low_complexity Low_complexity 1 22 0 2 1090 243 0 0 0 chrX 66202707 66202734 -100447562 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 2 1090 840 116 0 16 chrX 66202736 66202859 -100447437 - 5S rRNA rRNA 0 121 1 2 1090 866 175 18 0 chrX 66202861 66203018 -100447278 - B2_Mm2 SINE B2 -20 173 2 2 1090 200 233 0 0 chrX 66203089 66203132 -100447164 + A-rich Low_complexity Low_complexity 1 43 0 2 1090 759 189 18 0 chrX 66203224 66203454 -100446842 + (TA)n Simple_repeat Simple_repeat 1 234 0 2 1090 366 123 0 0 chrX 66203445 66203502 -100446794 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1090 2581 46 23 3 chrX 66203526 66203872 -100446424 + L1Md_F2 LINE L1 6207 6559 -23 2 1090 438 20 0 0 chrX 66203872 66203923 -100446373 + (TAA)n Simple_repeat Simple_repeat 1 51 0 2 1090 444 196 37 0 chrX 66205822 66205929 -100444367 + Lx5 LINE L1 6938 7048 -2 2 1090 22 35 0 0 chrX 66206949 66206978 -100443318 + AT_rich Low_complexity Low_complexity 1 29 0 2 1090 24 0 0 0 chrX 66207147 66207171 -100443125 + AT_rich Low_complexity Low_complexity 1 24 0 2 1090 4575 69 0 20 chrX 66207177 66207781 -100442515 - L1Md_F2 LINE L1 -13 6569 5978 2 1090 834 219 49 11 chrX 66207977 66208162 -100442134 - B3 SINE B2 0 216 25 2 1090 501 287 124 45 chrX 66208190 66208504 -100441792 - L1MB5 LINE L1 -66 6108 5770 2 1090 276 275 0 0 chrX 66208539 66208608 -100441688 + MLT2B2 LTR ERVL 1 69 -446 2 1090 23 33 0 0 chrX 66208704 66208734 -100441562 + AT_rich Low_complexity Low_complexity 1 30 0 2 1090 1258 270 67 35 chrX 66209043 66209642 -100440654 - L1MA9 LINE L1 -7 6305 5688 2 1090 453 318 27 7 chrX 66209937 66210086 -100440210 + Lx8 LINE L1 7118 7269 -204 3 1090 21 0 0 0 chrX 66210237 66210258 -100440038 + AT_rich Low_complexity Low_complexity 1 21 0 3 1090 22 0 0 0 chrX 66210405 66210427 -100439869 + AT_rich Low_complexity Low_complexity 1 22 0 3 1090 276 367 98 14 chrX 66211027 66211174 -100439122 - MIR SINE MIR -101 167 14 3 1090 6952 120 16 61 chrX 66211586 66212764 -100437532 - Lx4A LINE L1 -9 7049 5925 3 1090 6707 108 21 9 chrX 66212777 66212892 -100437404 - Lx LINE L1 -1 6653 6536 3 1090 192 77 0 0 chrX 66212892 66212918 -100437378 + (CCTA)n Simple_repeat Simple_repeat 3 28 0 3 1090 6707 119 31 8 chrX 66212918 66214404 -100435892 - Lx LINE L1 -119 6535 5001 3 1090 586 281 54 77 chrX 66214470 66214767 -100435529 - B4A SINE B4 0 292 3 3 1090 450 132 0 0 chrX 66214945 66215021 -100435275 + (GA)n Simple_repeat Simple_repeat 2 77 0 3 1090 4946 207 99 13 chrX 66217017 66218115 -100432181 - Lx6 LINE L1 -59 7401 6209 3 1090 989 81 23 11 chrX 66218168 66218342 -100431954 - L1_Mus3 LINE L1 0 6638 6463 3 1090 2331 209 31 47 chrX 66218356 66219159 -100431137 - Lx6 LINE L1 -1578 6118 5318 3 1090 594 52 0 20 chrX 66219202 66219300 -100430996 - L1Md_F3 LINE L1 -1 6583 6488 3 1090 583 233 84 15 chrX 66219871 66220002 -100430294 + B1_Mur2 SINE Alu 5 144 -5 3 1090 293 305 52 13 chrX 66220211 66220364 -100429932 - L1MA4A LINE L1 -375 5928 5770 3 1090 1828 32 0 0 chrX 66220581 66220798 -100429498 - L1Md_F2 LINE L1 -12 6570 6354 3 1090 2871 57 52 0 chrX 66220809 66221178 -100429118 - RLTR10 LTR ERVK -2 388 1 3 1090 620 312 57 71 chrX 66221658 66222235 -100428061 - Lx8 LINE L1 -1211 6262 5694 3 1090 2771 60 7 52 chrX 66222235 66222643 -100427653 + RLTR10 LTR ERVK 1 390 0 3 1090 3706 93 192 132 chrX 66222689 66223619 -100426677 + RLTR10-int LTR ERVK 13 998 -989 3 1090 328 258 39 15 chrX 66223683 66223813 -100426483 + RLTR10-int LTR ERVK 1462 1594 -5987 3 1090 8440 17 0 0 chrX 66223895 66224890 -100425406 + RLTR10-int LTR ERVK 990 1984 -3 3 1090 2761 62 7 52 chrX 66224892 66225300 -100424996 + RLTR10 LTR ERVK 1 390 0 3 1090 577 283 0 20 chrX 66225307 66225509 -100424787 - Lx8 LINE L1 -191 5689 5492 3 1090 1082 112 6 0 chrX 66225556 66225725 -100424571 + (TTCCC)n Simple_repeat Simple_repeat 5 174 0 3 1090 341 22 22 0 chrX 66225726 66225772 -100424524 + (TTTTC)n Simple_repeat Simple_repeat 2 48 0 3 1090 606 87 135 0 chrX 66225864 66225968 -100424328 - L1_Mus3 LINE L1 -309 6329 6212 3 1090 2054 95 6 22 chrX 66225968 66226279 -100424017 + L1_Mus3 LINE L1 6327 6632 -6 3 1090 1553 273 93 15 chrX 66226307 66227028 -100423268 - Lx8 LINE L1 -553 5327 4551 3 1090 5463 80 7 0 chrX 66227029 66227764 -100422532 - L1_Mus3 LINE L1 -5 6633 5894 3 1090 11145 101 7 17 chrX 66227764 66230319 -100419977 + L1_Mus2 LINE L1 4039 6564 -2 3 1090 1428 88 6 5 chrX 66230312 66230536 -100419760 + L1_Mus2 LINE L1 5761 5978 -588 3 1090 1310 241 62 30 chrX 66230533 66231037 -100419259 - L1_Mur3 LINE L1 -1303 4577 4058 3 1090 867 251 134 80 chrX 66231074 66231425 -100418871 - ORR1D2 LTR MaLR 0 370 1 3 1090 213 94 0 0 chrX 66232538 66232570 -100417726 + (TATG)n Simple_repeat Simple_repeat 3 34 0 3 1090 321 376 85 26 chrX 66232571 66232724 -100417572 - RSINE1 SINE B4 -1 164 3 3 1090 2702 227 123 35 chrX 66233633 66233781 -100416515 + Lx9 LINE L1 6135 6339 -1305 3 1090 423 38 0 0 chrX 66233781 66233834 -100416462 + (CAGT)n Simple_repeat Simple_repeat 4 56 0 3 1090 2702 227 123 35 chrX 66233834 66234540 -100415756 + Lx9 LINE L1 6340 7063 -581 3 1090 1639 32 9 5 chrX 66234539 66234758 -100415538 - L1Md_F3 LINE L1 0 6584 6365 3 1090 1475 213 202 0 chrX 66234749 66235219 -100415077 + Lx9 LINE L1 7073 7637 -7 3 1090 978 242 0 19 chrX 66235286 66235501 -100414795 + B3 SINE B2 2 212 -4 3 1090 933 281 139 38 chrX 66235887 66236029 -100414267 + L1MB2 LINE L1 5535 5705 -466 3 1090 462 18 0 0 chrX 66236029 66236084 -100414212 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1090 933 281 139 38 chrX 66236084 66236495 -100413801 + L1MB2 LINE L1 5706 6144 -27 3 1090 528 246 32 0 chrX 66236571 66236697 -100413599 - B1_Mur1 SINE Alu -1 148 19 3 1090 375 23 0 0 chrX 66236774 66236818 -100413478 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1090 2869 77 3 3 chrX 66237315 66237692 -100412604 - L1_Mus2 LINE L1 -2 6564 6188 3 1090 1603 266 9 36 chrX 66238211 66238655 -100411641 - Lx6 LINE L1 -1 7459 7028 3 1090 6228 134 39 1 chrX 66238660 66240240 -100410056 - Lx LINE L1 0 6654 5018 3 1090 198 0 0 0 chrX 66240250 66240272 -100410024 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 1090 2576 182 92 2 chrX 66240275 66240808 -100409488 - Lx6 LINE L1 -448 7012 6432 3 1090 6928 180 23 11 chrX 66242007 66243523 -100406773 - Lx5 LINE L1 -1 7049 5504 3 1090 1715 214 83 5 chrX 66243872 66244303 -100405993 - Lx2B LINE L1 -17 6983 6519 3 1090 719 186 208 15 chrX 66244303 66244505 -100405791 - RLTR31_Mm LTR ERVK 0 561 321 3 1090 2841 52 60 3 chrX 66244506 66244873 -100405423 + RLTR10 LTR ERVK 1 388 -2 3 1090 1304 64 6 0 chrX 66244885 66245056 -100405240 + RLTR10-int LTR ERVK 41 212 -1775 3 1090 250 211 38 95 chrX 66245082 66245187 -100405109 + RLTR10 LTR ERVK 292 390 0 3 1090 3894 38 23 2 chrX 66245187 66245792 -100404504 + RLTR10-int LTR ERVK 302 992 -995 3 1090 491 314 26 26 chrX 66245848 66246240 -100404056 + MMERVK10C-int LTR ERVK 1316 1594 -5987 3 1090 8127 30 0 3 chrX 66246322 66247322 -100402974 + RLTR10-int LTR ERVK 990 1986 -1 3 1090 2739 66 71 3 chrX 66247322 66247687 -100402609 + RLTR10 LTR ERVK 1 390 0 3 1090 1600 238 57 12 chrX 66247693 66248114 -100402182 - BGLII_A LTR ERVK -5 440 1 3 1090 885 170 48 0 chrX 66248114 66248279 -100402017 - Lx3C LINE L1 -449 6527 6355 3 1090 2578 185 36 0 chrX 66248276 66248796 -100401500 - Lx2B LINE L1 -821 6179 5641 3 1090 1551 157 15 0 chrX 66248793 66249067 -100401229 - L1_Mur2 LINE L1 -131 5746 5469 3 1090 5759 163 27 8 chrX 66249068 66250272 -100400024 - L1_Mur2 LINE L1 -1646 4231 3005 3 1090 550 246 49 8 chrX 66250504 66250627 -100399669 + B4 SINE B4 9 136 -156 3 1090 878 265 65 23 chrX 66251018 66251281 -100399015 - B4 SINE B4 -18 274 1 3 1090 192 395 13 0 chrX 66251330 66251406 -100398890 - L2c LINE L2 -42 3345 3269 3 1090 384 163 0 0 chrX 66252373 66252459 -100397837 + (CA)n Simple_repeat Simple_repeat 1 86 0 3 1090 219 250 0 0 chrX 66252459 66252519 -100397777 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 1090 21 57 0 0 chrX 66252548 66252583 -100397713 + AT_rich Low_complexity Low_complexity 1 35 0 3 1090 187 381 82 0 chrX 66252634 66252731 -100397565 + MIRc SINE MIR 63 167 -101 3 1090 314 333 32 0 chrX 66252986 66253109 -100397187 + MIRb SINE MIR 84 210 -58 3 1090 21 36 0 0 chrX 66253197 66253225 -100397071 + AT_rich Low_complexity Low_complexity 1 28 0 3 1090 241 213 0 21 chrX 66253471 66253519 -100396777 - L2a LINE L2 -10 3416 3370 3 1090 280 286 36 0 chrX 66253693 66253777 -100396519 + Lx9 LINE L1 6448 6534 -1110 3 1090 835 307 61 17 chrX 66253798 66254159 -100396137 - Lx9 LINE L1 -276 7368 6992 3 1090 365 96 0 0 chrX 66254269 66254321 -100395975 + RLTR1B LTR ERV1 359 410 -102 3 1090 509 174 22 0 chrX 66254325 66254417 -100395879 + RLTR1B LTR ERV1 343 436 -76 3 1090 3437 2 0 0 chrX 66254418 66254823 -100395473 + L1_Mm LINE L1 5141 5545 -338 3 1090 420 193 50 50 chrX 66254823 66254864 -100395432 + RLTR1B LTR ERV1 384 427 -76 3 1090 8405 36 0 0 chrX 66254864 66255860 -100394436 + L1Md_A LINE L1 5587 6582 0 3 1090 499 128 13 0 chrX 66255860 66255938 -100394358 + RLTR1B LTR ERV1 434 512 0 3 1090 9289 118 97 47 chrX 66255938 66257427 -100392869 + RLTR1B-int LTR ERV1 1 1388 -2310 3 1090 360 0 0 0 chrX 66257427 66257467 -100392829 + (GA)n Simple_repeat Simple_repeat 2 41 0 3 1090 9289 74 183 20 chrX 66257467 66258004 -100392292 + RLTR1B-int LTR ERV1 1143 1749 -1550 3 1090 745 117 422 28 chrX 66257994 66258174 -100392122 + RLTR1B-int LTR ERV1 1859 2109 -1190 3 1090 4926 38 54 0 chrX 66258171 66258802 -100391494 + RLTR1B-int LTR ERV1 2635 3299 0 3 1090 1341 150 111 48 chrX 66258802 66259232 -100391064 + RLTR1B LTR ERV1 1 430 -82 3 1090 342 0 0 0 chrX 66259232 66259270 -100391026 + (A)n Simple_repeat Simple_repeat 1 38 0 3 1090 252 0 0 0 chrX 66259322 66259350 -100390946 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1090 1086 275 50 6 chrX 66259359 66259677 -100390619 + Lx9 LINE L1 6348 6679 -965 3 1090 459 177 0 0 chrX 66259731 66259827 -100390469 + (CA)n Simple_repeat Simple_repeat 1 96 0 3 1090 665 185 29 7 chrX 66259891 66260027 -100390269 + Lx9 LINE L1 6684 6822 -822 3 1090 640 60 0 0 chrX 66260104 66260187 -100390109 + L1Md_F2 LINE L1 6388 6470 -112 3 1090 286 221 15 0 chrX 66260192 66260260 -100390036 + Lx9 LINE L1 6930 6998 -646 3 1090 22 0 0 0 chrX 66262884 66262906 -100387390 + AT_rich Low_complexity Low_complexity 1 22 0 3 1090 467 371 79 38 chrX 66263196 66263462 -100386834 - MamGypLTR3 LTR Gypsy -11 828 552 3 1090 7401 46 8 0 chrX 66263566 66264525 -100385771 - L1Md_F3 LINE L1 -14 6570 5604 3 1090 16838 14 0 1 chrX 66264766 66267473 -100382823 - L1Md_A LINE L1 0 6582 3878 3 1090 216 229 21 0 chrX 66267986 66268034 -100382262 + (CATA)n Simple_repeat Simple_repeat 1 49 0 3 1090 1241 41 0 0 chrX 66268738 66268883 -100381413 - B1_Mm SINE Alu -2 145 1 3 1090 28 0 0 0 chrX 66268993 66269021 -100381275 + AT_rich Low_complexity Low_complexity 1 28 0 3 1090 783 152 8 195 chrX 66269380 66269641 -100380655 - RMER1C Other Other -2 1340 1129 3 1090 1652 278 54 24 chrX 66269644 66270233 -100380063 - Lx8 LINE L1 -123 7350 6744 3 1090 473 188 12 0 chrX 66270235 66270315 -100379981 + B1_Mus1 SINE Alu 2 82 -66 3 1090 334 322 0 61 chrX 66270315 66270332 -100379964 + B4 SINE B4 87 177 -115 3 1090 4555 99 11 7 chrX 66270337 66271068 -100379228 - L1_Mur1 LINE L1 -1578 4308 3575 3 1090 36264 30 0 0 chrX 66271073 66277772 -100372524 - L1Md_T LINE L1 0 6585 1 3 1090 1573 129 19 34 chrX 66277768 66278089 -100372207 - L1_Mur1 LINE L1 -2292 3594 3279 3 1090 513 143 0 42 chrX 66278089 66278184 -100372112 + B1_Mur4 SINE Alu 60 150 0 3 1090 212 54 0 51 chrX 66278184 66278223 -100372073 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 3 1090 1095 275 103 9 chrX 66278232 66278581 -100371715 - Lx8 LINE L1 -720 6753 6372 3 1090 24 67 0 0 chrX 66278657 66278702 -100371594 + AT_rich Low_complexity Low_complexity 1 45 0 3 1090 957 71 0 0 chrX 66278893 66279019 -100371277 + B1_Mus1 SINE Alu 15 140 -8 3 1090 304 323 71 12 chrX 66279051 66279220 -100371076 - RMER4A LTR ERVK -280 186 8 3 1090 287 281 134 23 chrX 66279503 66279674 -100370622 - Tigger6a DNA MER2_type -37 1046 857 3 1090 802 130 80 0 chrX 66279687 66279825 -100370471 + Lx2 LINE L1 6848 6996 -1 3 1090 180 0 0 0 chrX 66280132 66280152 -100370144 + (TC)n Simple_repeat Simple_repeat 2 21 0 3 1090 501 307 0 112 chrX 66280162 66280331 -100369965 - RSINE1 SINE B4 -14 151 2 3 1090 396 0 0 0 chrX 66280337 66280381 -100369915 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1090 242 280 63 36 chrX 66280398 66280509 -100369787 - Tigger6a DNA MER2_type -411 672 559 3 1090 1708 286 82 18 chrX 66280680 66281193 -100369103 - Tigger6a DNA MER2_type -537 546 1 3 1090 469 305 89 6 chrX 66282965 66283133 -100367163 + MTEb LTR MaLR 5 186 -193 3 1090 375 278 70 62 chrX 66283340 66283582 -100366714 - L1MEe LINE L1 -3845 1009 766 3 1090 704 285 73 23 chrX 66283716 66284111 -100366185 - L1MEe LINE L1 -4211 643 229 3 1090 3648 76 15 40 chrX 66284292 66284811 -100365485 - L1_Mus2 LINE L1 -3 6563 6058 3 1090 360 0 0 0 chrX 66284914 66284954 -100365342 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 1090 682 88 18 0 chrX 66285080 66285194 -100365102 - Lx2 LINE L1 -1 6996 6881 4 1090 2061 91 0 0 chrX 66285241 66285528 -100364768 + L1_Mm LINE L1 5465 5751 -132 4 1090 1266 76 0 6 chrX 66285528 66285700 -100364596 + L1_Mus1 LINE L1 6395 6565 -2 4 1090 243 88 0 0 chrX 66285706 66285740 -100364556 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1090 225 94 0 0 chrX 66285757 66285789 -100364507 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 4 1090 216 0 0 0 chrX 66285894 66285918 -100364378 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 1090 256 149 122 0 chrX 66285958 66285978 -100364318 - L1_Mur3 LINE L1 -6511 1201 1182 4 1090 189 0 0 0 chrX 66285978 66285999 -100364297 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1090 256 149 122 0 chrX 66285999 66286052 -100364244 - L1_Mur3 LINE L1 -6531 1181 1120 4 1090 599 208 133 6 chrX 66286083 66286256 -100364040 - Lx4B LINE L1 -5 7053 6768 4 1090 664 197 100 35 chrX 66286263 66286463 -100363833 - L1_Mur3 LINE L1 -6595 1117 905 4 1090 45 45 0 0 chrX 66286472 66286538 -100363758 + AT_rich Low_complexity Low_complexity 1 66 0 4 1090 2177 147 16 11 chrX 66286538 66286909 -100363387 - Lx4A LINE L1 0 7058 6686 4 1090 427 177 105 25 chrX 66286949 66287111 -100363185 + Lx9 LINE L1 7470 7644 0 4 1090 24 0 0 0 chrX 66287649 66287673 -100362623 + AT_rich Low_complexity Low_complexity 1 24 0 4 1090 255 338 117 87 chrX 66287765 66288014 -100362282 - ORR1E LTR MaLR -12 347 90 4 1090 2655 89 35 12 chrX 66288014 66288414 -100361882 - RLTR9E LTR ERVK 0 409 1 4 1090 255 338 117 87 chrX 66288414 66288430 -100361866 - ORR1E LTR MaLR -270 89 74 4 1090 498 143 0 28 chrX 66288678 66288786 -100361510 + CT-rich Low_complexity Low_complexity 4 108 0 4 1090 240 287 57 11 chrX 66289125 66289213 -100361083 - MER5A DNA MER1_type -2 187 96 4 1090 32794 85 3 5 chrX 66289411 66295498 -100354798 - L1Md_F2 LINE L1 -12 6570 498 4 1090 3619 195 13 4 chrX 66295499 66296304 -100353992 - L1Md_A LINE L1 -5488 1236 446 4 1090 240 363 29 10 chrX 66296685 66296788 -100353508 + MER5A1 DNA MER1_type 53 157 -9 4 1090 231 331 126 22 chrX 66298360 66298542 -100351754 + L2a LINE L2 3225 3425 -1 4 1090 1016 91 6 29 chrX 66298943 66299113 -100351183 + Lx LINE L1 6483 6648 -6 4 1090 1548 302 96 14 chrX 66300242 66300961 -100349335 - Lx8 LINE L1 -220 7253 6476 4 1090 220 195 24 0 chrX 66301060 66301101 -100349195 + CT-rich Low_complexity Low_complexity 3 44 0 4 1090 1263 94 0 0 chrX 66301102 66301282 -100349014 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 1090 1570 137 76 4 chrX 66301304 66301568 -100348728 - Lx3B LINE L1 -3 6970 6688 4 1090 517 312 12 54 chrX 66302764 66302930 -100347366 + MLT1E1A LTR MaLR 426 584 -96 4 1090 441 0 0 0 chrX 66303125 66303174 -100347122 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 1090 360 0 0 0 chrX 66303174 66303213 -100347083 + (GA)n Simple_repeat Simple_repeat 1 40 0 4 1090 227 291 0 0 chrX 66303411 66303490 -100346806 - L1M2 LINE L1 -520 5777 5699 4 1090 6280 63 7 5 chrX 66304149 66304964 -100345332 - L1Md_F2 LINE L1 0 6582 5766 4 1090 2529 59 0 0 chrX 66304964 66305287 -100345009 + L1Md_F2 LINE L1 5364 5686 -197 4 1090 401 307 18 6 chrX 66305902 66306069 -100344227 - Lx8 LINE L1 -979 6494 6326 4 1090 1782 299 81 20 chrX 66306043 66306832 -100343464 + Lx8 LINE L1 6601 7437 -36 4 1090 216 97 0 0 chrX 66307791 66307822 -100342474 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1090 2171 153 14 0 chrX 66307930 66308290 -100342006 - Lx4A LINE L1 -180 6878 6514 4 1090 1094 146 0 0 chrX 66308290 66308482 -100341814 - L1_Mur2 LINE L1 -2403 3474 3283 4 1090 4235 165 19 114 chrX 66308480 66309650 -100340646 - L1_Mur2 LINE L1 -3335 2542 1485 4 1090 29284 88 12 24 chrX 66309902 66314990 -100335306 + L1Md_F2 LINE L1 554 5586 -297 4 1090 7366 66 20 0 chrX 66314990 66315954 -100334342 + L1Md_F2 LINE L1 5587 6569 -13 4 1090 21 0 0 0 chrX 66316014 66316035 -100334261 + AT_rich Low_complexity Low_complexity 1 21 0 4 1090 986 83 18 0 chrX 66316106 66316274 -100334022 - Lx3_Mus LINE L1 0 7009 6839 4 1090 1291 177 18 9 chrX 66316274 66316811 -100333485 - L1_Mur2 LINE L1 -4384 1493 892 4 1090 6632 29 0 0 chrX 66316935 66317707 -100332589 - L1Md_A LINE L1 0 6582 5811 4 1090 181 274 20 0 chrX 66318014 66318065 -100332231 - MIR SINE MIR -101 161 110 4 1090 665 177 85 6 chrX 66318837 66319002 -100331294 - L5 LINE RTE -4 2261 2084 4 1090 4883 97 23 11 chrX 66319288 66320178 -100330118 + Lx3A LINE L1 5112 6015 -966 4 1090 742 292 86 0 chrX 66320661 66320918 -100329378 - L5 LINE RTE -1457 808 530 4 1090 240 179 0 0 chrX 66320957 66320996 -100329300 + L3 LINE CR1 3244 3282 -1207 4 1090 5339 64 16 1 chrX 66321101 66321786 -100328510 - L1_Mus2 LINE L1 -1 6565 5871 4 1090 295 376 105 34 chrX 66321903 66322112 -100328184 - L2a LINE L2 -245 3181 2958 4 1090 249 389 83 16 chrX 66322177 66322370 -100327926 + L3 LINE CR1 3395 3600 -889 4 136 272 358 28 28 chrX 66322368 66322546 -100327750 - MIR SINE MIR -1 261 84 4 1091 6912 87 8 1 chrX 66322987 66324075 -100326221 - L1_Mus1 LINE L1 0 6567 5472 4 1091 2052 203 133 30 chrX 66324076 66324747 -100325549 - L1Md_F LINE L1 -5490 1029 290 4 1091 21 0 0 0 chrX 66324757 66324778 -100325518 + AT_rich Low_complexity Low_complexity 1 21 0 4 1091 1773 134 88 120 chrX 66325308 66325799 -100324497 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1091 2096 184 30 17 chrX 66326014 66326417 -100323879 - RMER15 LTR ERVL 0 575 168 4 1091 296 318 0 0 chrX 66326417 66326502 -100323794 - RMER15 LTR ERVL -352 223 139 4 1091 24929 105 51 9 chrX 66326522 66331505 -100318791 + L1_Mus2 LINE L1 1359 6565 -1 4 1091 3566 246 36 15 chrX 66331510 66332451 -100317845 + Lx7 LINE L1 6071 7031 -665 4 1091 4912 114 10 0 chrX 66332466 66333188 -100317108 - L1_Mus4 LINE L1 -2 6634 5906 4 1091 5040 133 1 0 chrX 66333188 66333956 -100316340 + L1_Mus4 LINE L1 5115 5883 0 4 1091 1949 199 50 50 chrX 66333969 66334409 -100315887 + Lx7 LINE L1 7027 7466 -230 4 1091 364 242 76 30 chrX 66334433 66334565 -100315731 + Lx7 LINE L1 7559 7696 0 4 1091 273 204 41 0 chrX 66335152 66335201 -100315095 + MIRb SINE MIR 25 75 -193 4 1091 183 80 0 0 chrX 66335429 66335454 -100314842 + (TTA)n Simple_repeat Simple_repeat 2 26 0 4 1091 318 316 0 0 chrX 66335625 66335720 -100314576 - RSINE1 SINE B4 -68 97 3 4 1091 797 290 135 51 chrX 66336098 66336549 -100313747 - Lx8 LINE L1 -21 7452 6964 4 1091 522 0 0 0 chrX 66336642 66336700 -100313596 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1091 300 137 0 0 chrX 66336700 66336751 -100313545 + (CCTG)n Simple_repeat Simple_repeat 1 51 0 4 1091 213 323 115 77 chrX 66336782 66336990 -100313306 + L3 LINE CR1 4163 4378 -111 4 1091 755 97 0 9 chrX 66337434 66337549 -100312747 + (CA)n Simple_repeat Simple_repeat 1 114 0 4 1091 183 308 31 0 chrX 66338140 66338205 -100312091 - MIR SINE MIR -13 249 183 4 1091 243 277 0 0 chrX 66338490 66338537 -100311759 - RSINE1 SINE B4 -117 48 2 4 1091 198 167 0 0 chrX 66338623 66338659 -100311637 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 4 1091 1089 179 53 0 chrX 66338984 66339174 -100311122 + MERVL-int LTR ERVL 3401 3600 -2161 4 1091 6169 183 35 13 chrX 66339170 66340593 -100309703 + MERVL-int LTR ERVL 4017 5578 -183 4 1091 247 286 61 79 chrX 66340594 66340708 -100309588 + ORR1A3-int LTR MaLR 513 624 -1339 4 1091 485 221 36 22 chrX 66340708 66340847 -100309449 + MERVL-int LTR ERVL 5621 5761 0 4 1091 713 221 105 186 chrX 66340847 66341054 -100309242 + MT2B LTR ERVL 1 314 -287 4 1091 525 87 0 46 chrX 66341054 66341163 -100309133 + L1_Mus3 LINE L1 6535 6638 0 4 1091 713 238 147 111 chrX 66341163 66341393 -100308903 + MT2B LTR ERVL 315 559 -42 4 1091 477 0 0 0 chrX 66341393 66341446 -100308850 + (GA)n Simple_repeat Simple_repeat 1 53 0 4 1091 713 238 147 111 chrX 66341446 66341487 -100308809 + MT2B LTR ERVL 560 598 -3 4 1091 1026 268 76 26 chrX 66342470 66342972 -100307324 - L1MB7 LINE L1 -1 6183 5657 4 1091 468 364 68 34 chrX 66344095 66344485 -100305811 - MLT1H1 LTR MaLR 0 555 144 4 1091 534 57 0 0 chrX 66344591 66344661 -100305635 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 1091 194 304 114 65 chrX 66345422 66345545 -100304751 + L2a LINE L2 3278 3406 -20 4 1091 3121 208 35 6 chrX 66345555 66346248 -100304048 + Lx2B LINE L1 6288 7000 0 4 1091 280 276 0 26 chrX 66346570 66346648 -100303648 + MIR SINE MIR 81 156 -106 4 1091 462 338 83 78 chrX 66347525 66347822 -100302474 - MLT1D LTR MaLR -7 498 163 4 1091 233 371 66 95 chrX 66347984 66348288 -100302008 - MTE2b LTR MaLR -84 295 1 4 1091 240 374 11 0 chrX 66348429 66348520 -100301776 + PB1D10 SINE Alu 6 97 -20 4 1091 1270 147 0 35 chrX 66348714 66348946 -100301350 - Lx3B LINE L1 -1 6972 6749 4 1091 819 47 0 0 chrX 66348974 66349080 -100301216 - B1_Mm SINE Alu 0 147 42 4 1091 230 178 112 56 chrX 66349017 66349124 -100301172 - RLTR25B LTR ERVK -519 509 397 4 1091 258 75 0 48 chrX 66349216 66349258 -100301038 - PB1D9 SINE Alu -61 59 20 4 1091 1601 233 32 71 chrX 66349249 66349745 -100300551 - RMER19B LTR ERVK -238 664 88 4 1091 727 225 122 24 chrX 66350295 66350500 -100299796 + URR1A DNA MER1_type 2 226 0 4 1091 1839 322 20 70 chrX 66351713 66351879 -100298417 - Lx9 LINE L1 -469 7175 7028 4 1091 3262 104 10 10 chrX 66351879 66352366 -100297930 - Lx2A1 LINE L1 -5 7003 6517 4 1091 1839 322 20 70 chrX 66352366 66353077 -100297219 - Lx9 LINE L1 -617 7027 6341 4 1091 23 78 0 0 chrX 66353092 66353143 -100297153 + AT_rich Low_complexity Low_complexity 1 51 0 4 1091 198 277 60 30 chrX 66353767 66353834 -100296462 + L2a LINE L2 2568 2636 -783 4 1091 326 364 113 55 chrX 66354056 66354499 -100295797 + L2a LINE L2 2910 3401 -25 4 1091 467 272 71 30 chrX 66356642 66356839 -100293457 - Charlie26a DNA MER1_type -71 254 50 4 1091 226 261 30 30 chrX 66357048 66357115 -100293181 - RMER21A LTR ERV1 -73 874 808 4 1091 1545 290 153 24 chrX 66357144 66357946 -100292350 + L1MC3 LINE L1 6549 7459 -326 4 1091 414 0 32 32 chrX 66357946 66358009 -100292287 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 4 1091 1545 290 153 24 chrX 66358009 66358031 -100292265 + L1MC3 LINE L1 7460 7481 -304 4 1091 1186 68 0 0 chrX 66358031 66358177 -100292119 + B1_Mus2 SINE Alu 2 147 0 4 1091 825 107 0 0 chrX 66358177 66358299 -100291997 + (GGAA)n Simple_repeat Simple_repeat 3 124 0 4 1091 1545 290 153 24 chrX 66358299 66358397 -100291899 + L1MC3 LINE L1 7482 7591 -194 4 1091 354 45 0 0 chrX 66359754 66359798 -100290498 + (TATG)n Simple_repeat Simple_repeat 4 47 0 4 1091 303 93 0 0 chrX 66360002 66360045 -100290251 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 1091 25 0 0 0 chrX 66360055 66360080 -100290216 + AT_rich Low_complexity Low_complexity 1 25 0 4 1091 22 70 0 0 chrX 66360392 66360435 -100289861 + AT_rich Low_complexity Low_complexity 1 43 0 4 1091 278 181 53 0 chrX 66360814 66360908 -100289388 - Lx9 LINE L1 0 7644 7546 5 1091 215 319 143 0 chrX 66361096 66361187 -100289109 - MIRm SINE MIR 0 276 173 5 1091 231 287 144 25 chrX 66361963 66362081 -100288215 - MLT1A1 LTR MaLR -264 144 13 5 1091 28 61 0 0 chrX 66362598 66362647 -100287649 + AT_rich Low_complexity Low_complexity 1 49 0 5 1091 519 304 102 25 chrX 66362749 66362994 -100287302 - Lx9 LINE L1 -171 7473 7071 5 1091 26 74 0 0 chrX 66363186 66363240 -100287056 + AT_rich Low_complexity Low_complexity 1 54 0 5 1091 1518 289 78 32 chrX 66364284 66364436 -100285860 - L1MA8 LINE L1 -33 7218 7065 5 1091 4124 89 30 2 chrX 66364436 66365008 -100285288 + L1_Mus3 LINE L1 6049 6636 -2 5 1091 1518 289 78 32 chrX 66365008 66365755 -100284541 - L1MA8 LINE L1 -187 7064 6278 5 1091 1421 329 49 26 chrX 66366133 66366745 -100283551 - Lx8 LINE L1 -185 7288 6663 5 1091 299 235 177 40 chrX 66366740 66366864 -100283432 - L1MA8 LINE L1 -1157 5943 5803 5 1091 545 314 10 30 chrX 66366846 66367043 -100283253 - Lx8 LINE L1 -824 6649 6457 5 1091 765 300 70 3 chrX 66367228 66367612 -100282684 - L1MA8 LINE L1 -1872 5231 4822 5 1091 1699 101 4 4 chrX 66367612 66367851 -100282445 + Lx3_Mus LINE L1 5651 5889 -1120 5 1091 2134 53 0 0 chrX 66367836 66368098 -100282198 - L1Md_A LINE L1 -22 6560 6299 5 1091 1571 103 4 52 chrX 66368113 66368380 -100281916 + Lx3_Mus LINE L1 5862 6115 -894 5 1091 942 266 19 10 chrX 66368399 66368707 -100281589 - L1MA8 LINE L1 -3281 3822 3512 5 1091 479 267 30 18 chrX 66368954 66369118 -100281178 - L1MA8 LINE L1 -4290 2817 2652 5 1091 318 50 0 0 chrX 66369210 66369250 -100281046 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 5 1091 262 315 14 14 chrX 66369252 66369326 -100280970 - ID4_ SINE ID -8 75 2 5 1091 363 250 135 16 chrX 66369341 66369467 -100280829 - B1F SINE Alu -8 141 1 5 1091 238 306 11 34 chrX 66369634 66369722 -100280574 - PB1D10 SINE Alu 0 117 32 5 1091 553 356 141 2 chrX 66369788 66370235 -100280061 - Lx8 LINE L1 -29 7444 6936 5 1091 1921 280 36 25 chrX 66370285 66370890 -100279406 - Lx8 LINE L1 -680 6793 6182 5 1091 814 52 0 0 chrX 66370901 66370998 -100279298 + L1Md_F2 LINE L1 5489 5585 -298 5 1091 7484 70 7 5 chrX 66370999 66371979 -100278317 + L1Md_F2 LINE L1 5587 6568 -14 5 1091 209 57 0 28 chrX 66371986 66372022 -100278274 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1091 896 293 29 76 chrX 66372028 66372576 -100277720 - Lx8 LINE L1 -1319 6154 5618 5 1091 844 214 71 12 chrX 66372576 66372831 -100277465 - Lx8 LINE L1 -537 5310 5041 5 1091 1836 221 7 85 chrX 66372827 66373382 -100276914 + Lx8 LINE L1 4519 5030 -817 5 1091 321 306 109 34 chrX 66373401 66373668 -100276628 - L1MA8 LINE L1 -5177 1931 1645 5 1091 313 234 0 41 chrX 66373669 66373799 -100276497 + L1_Rod LINE L1 4682 4825 -1055 5 1091 251 254 0 113 chrX 66373930 66373964 -100276332 - B1F SINE Alu -5 144 118 5 1091 1253 193 215 3 chrX 66373964 66374271 -100276025 + ORR1D1 LTR MaLR 1 372 -2 5 1091 251 254 0 113 chrX 66374271 66374307 -100275989 - B1F SINE Alu -32 117 82 5 1091 35 54 0 0 chrX 66374484 66374540 -100275756 + AT_rich Low_complexity Low_complexity 1 56 0 5 1091 1030 331 45 25 chrX 66374552 66374998 -100275298 - Lx8 LINE L1 -1 7472 7018 5 1091 340 378 61 75 chrX 66375289 66375664 -100274632 - L1MA8 LINE L1 -6507 523 154 5 1091 24 32 0 0 chrX 66375664 66375695 -100274601 + AT_rich Low_complexity Low_complexity 1 31 0 5 1091 297 128 0 0 chrX 66375707 66375754 -100274542 + (TGG)n Simple_repeat Simple_repeat 1 47 0 5 1091 230 281 60 6 chrX 66376044 66376132 -100274164 - L2a LINE L2 0 3426 3289 5 1091 629 265 20 7 chrX 66376383 66376535 -100273761 - RSINE1 SINE B4 0 165 12 5 1091 3692 38 4 4 chrX 66377216 66377669 -100272627 - L1Md_F3 LINE L1 -3 6581 6129 5 1091 457 306 184 59 chrX 66377857 66378177 -100272119 - MLT1A0 LTR MaLR 0 365 6 5 1091 381 93 0 0 chrX 66378297 66378351 -100271945 + (TAA)n Simple_repeat Simple_repeat 1 54 0 5 1091 645 101 0 0 chrX 66379251 66379350 -100270946 + (TTTC)n Simple_repeat Simple_repeat 1 99 0 5 1091 216 0 0 0 chrX 66379350 66379374 -100270922 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 1091 2988 64 17 10 chrX 66379374 66379787 -100270509 - BGLII LTR ERVK -5 416 1 5 1091 1733 165 25 34 chrX 66379787 66380109 -100270187 - ORR1B1 LTR MaLR -68 326 8 5 1091 3604 302 47 61 chrX 66380164 66380557 -100269739 - Lx7 LINE L1 -397 7299 6900 5 1091 1250 90 50 6 chrX 66380557 66380736 -100269560 + B2_Mm2 SINE B2 1 187 -8 5 1091 3604 302 47 61 chrX 66380736 66380753 -100269543 - Lx7 LINE L1 -797 6899 6893 5 1091 261 0 0 0 chrX 66380753 66380782 -100269514 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1091 3604 300 44 58 chrX 66380782 66382126 -100268170 - Lx7 LINE L1 -804 6892 5548 5 1091 3833 153 57 40 chrX 66382215 66382614 -100267682 - L1_Mur2 LINE L1 -1636 4241 3811 5 1091 4138 72 2 43 chrX 66382614 66383126 -100267170 - L1Md_F2 LINE L1 -5 6577 6088 5 1091 2833 42 19 82 chrX 66383126 66383540 -100266756 - RLTR10 LTR ERVK -2 388 1 5 1091 4138 72 2 43 chrX 66383540 66383626 -100266670 - L1Md_F2 LINE L1 -495 6087 6004 5 1091 3833 153 57 40 chrX 66383626 66383995 -100266301 - L1_Mur2 LINE L1 -2067 3810 3460 5 1091 415 200 0 0 chrX 66383987 66384067 -100266229 + L1_Mur2 LINE L1 2411 2490 -3387 5 1091 570 223 9 0 chrX 66384066 66384178 -100266118 - Lx6 LINE L1 -842 6618 6506 5 1091 3619 210 43 49 chrX 66384242 66385814 -100264482 - Lx6 LINE L1 -3 6651 5111 5 1091 2893 199 13 45 chrX 66385815 66386410 -100263886 + RMER4B LTR ERVK 1 576 -9 5 1091 3134 153 0 14 chrX 66386415 66386966 -100263330 - Lx6 LINE L1 -763 5117 4575 5 1091 231 384 67 27 chrX 66388290 66388440 -100261856 - Charlie15a DNA MER1_type -22 202 47 5 1091 211 327 33 83 chrX 66388458 66388624 -100261672 - MIRc SINE MIR -105 163 6 5 1091 372 22 0 0 chrX 66389343 66389388 -100260908 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1091 39 38 0 0 chrX 66392232 66392285 -100258011 + AT_rich Low_complexity Low_complexity 1 53 0 5 1091 302 123 0 17 chrX 66392298 66392356 -100257940 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 1091 384 331 54 14 chrX 66392357 66392504 -100257792 - RSINE1 SINE B4 0 165 13 5 1091 764 246 40 18 chrX 66392511 66392739 -100257557 - L1MA6 LINE L1 -3 6297 6065 5 1091 340 332 28 43 chrX 66392887 66393098 -100257198 + L2a LINE L2 3213 3420 -6 5 1091 599 376 69 32 chrX 66393689 66394262 -100256034 - L2a LINE L2 -1 3425 2839 5 1091 282 355 128 19 chrX 66394274 66394595 -100255701 - L2a LINE L2 -773 2646 2291 5 1091 564 320 56 55 chrX 66394863 66394909 -100255387 - L1M2 LINE L1 -897 5246 5206 5 1091 1169 193 9 18 chrX 66394909 66395136 -100255160 + URR1A DNA MER1_type 1 225 -1 5 1091 564 320 56 55 chrX 66395136 66395553 -100254743 - L1M2 LINE L1 -938 5205 4782 5 1091 443 48 16 0 chrX 66395553 66395615 -100254681 + (TA)n Simple_repeat Simple_repeat 2 64 0 5 1091 564 320 56 55 chrX 66395615 66395808 -100254488 - L1M2 LINE L1 -1362 4781 4588 5 1091 1162 234 102 7 chrX 66395795 66396088 -100254208 - Lx9 LINE L1 -223 7421 7101 5 1091 3084 45 3 0 chrX 66396090 66396472 -100253824 - L1Md_T LINE L1 -12 6570 6188 5 1091 4619 26 0 0 chrX 66396472 66397009 -100253287 + L1Md_T LINE L1 5662 6198 -384 5 1091 3538 250 58 18 chrX 66396988 66398106 -100252190 - Lx9 LINE L1 -513 7131 5836 5 1091 8466 30 1 0 chrX 66398113 66399183 -100251113 - L1Md_T LINE L1 0 6582 5512 5 1091 7350 62 2 11 chrX 66399182 66400701 -100249595 - L1Md_Gf LINE L1 -4090 1796 194 5 1091 477 205 45 0 chrX 66400692 66400804 -100249492 - Lx9 LINE L1 -29 5818 5702 5 1091 257 164 49 0 chrX 66401149 66401210 -100249086 - MER96B DNA hAT -125 292 229 5 1091 256 231 0 15 chrX 66403328 66403394 -100246902 + (TA)n Simple_repeat Simple_repeat 1 65 0 5 1091 346 257 81 0 chrX 66403689 66403763 -100246533 - L2b LINE L2 0 3375 3296 5 1091 903 106 0 0 chrX 66404007 66404167 -100246129 + (TTTCC)n Simple_repeat Simple_repeat 5 164 0 5 1091 446 226 98 0 chrX 66404840 66404949 -100245347 + B1F SINE Alu 1 120 0 5 1091 227 115 0 47 chrX 66404962 66405026 -100245270 - L1ME4a LINE L1 -23 6101 6041 5 1091 252 59 0 0 chrX 66405099 66405133 -100245163 + (TC)n Simple_repeat Simple_repeat 1 34 0 5 1091 554 63 0 12 chrX 66405133 66405213 -100245083 + (TA)n Simple_repeat Simple_repeat 1 79 0 5 1091 279 131 0 0 chrX 66405413 66405460 -100244836 - ORR1D1 LTR MaLR 0 378 332 5 1091 618 230 35 21 chrX 66405490 66405632 -100244664 - ORR1D1-int LTR MaLR -487 883 740 5 1091 657 260 224 19 chrX 66405614 66405873 -100244423 + ORR1D1 LTR MaLR 35 346 -28 5 1091 5736 226 60 32 chrX 66405874 66407202 -100243094 + ORR1D1-int LTR MaLR 6 1370 0 5 1091 1233 232 113 14 chrX 66407202 66407510 -100242786 + ORR1D1 LTR MaLR 1 347 -47 5 1091 327 234 232 57 chrX 66407510 66407687 -100242609 - ORR1D1 LTR MaLR 0 374 167 5 1091 214 250 0 0 chrX 66407687 66407727 -100242569 + polypurine Low_complexity Low_complexity 2 41 0 5 1091 955 231 6 6 chrX 66407728 66407911 -100242385 - ORR1D1 LTR MaLR -191 183 1 5 1091 346 384 41 26 chrX 66408108 66408378 -100241918 + L2 LINE L2 2331 2604 -815 5 1091 585 268 6 63 chrX 66408871 66409046 -100241250 - RSINE1 SINE B4 0 165 1 5 1091 279 0 0 0 chrX 66409528 66409559 -100240737 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1091 522 0 0 0 chrX 66409559 66409616 -100240680 + (TA)n Simple_repeat Simple_repeat 1 58 0 5 1091 963 67 75 0 chrX 66410032 66410166 -100240130 + B1_Mus2 SINE Alu 1 144 -3 5 1091 306 0 0 0 chrX 66410166 66410200 -100240096 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 1091 2458 207 15 36 chrX 66410670 66411234 -100239062 + MTC-int LTR MaLR 122 770 -488 5 1091 224 374 98 19 chrX 66411298 66411513 -100238783 + L2 LINE L2 2851 3082 -337 5 1091 1790 318 58 25 chrX 66411815 66412718 -100237578 - Lx8 LINE L1 -97 7376 6389 5 1091 22 70 0 0 chrX 66412948 66412991 -100237305 + AT_rich Low_complexity Low_complexity 1 43 0 5 1091 1722 176 22 19 chrX 66413627 66413946 -100236350 - ORR1B1 LTR MaLR -34 360 41 5 1091 537 345 66 84 chrX 66414045 66414821 -100235475 - L1M5 LINE L1 -977 5169 4408 5 1091 828 279 79 32 chrX 66415885 66416110 -100234186 - ID_B1 SINE B4 0 292 69 5 1091 2772 152 34 2 chrX 66416110 66416578 -100233718 - Lx LINE L1 -4 6650 6168 5 1091 828 267 63 0 chrX 66416578 66416632 -100233664 - ID SINE ID -156 68 8 5 1091 5543 68 11 0 chrX 66416673 66417389 -100232907 - L1_Mus2 LINE L1 -1 6565 5842 5 1091 234 358 41 8 chrX 66417722 66417843 -100232453 - MIR SINE MIR -64 144 20 5 1091 186 43 0 0 chrX 66418225 66418248 -100232048 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 5 1091 558 185 0 0 chrX 66418248 66418367 -100231929 - Lx9 LINE L1 -9 7635 7517 5 1091 432 0 0 0 chrX 66418367 66418415 -100231881 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1091 436 185 65 0 chrX 66418418 66418510 -100231786 - Lx9 LINE L1 -185 7459 7362 5 1091 339 177 49 37 chrX 66418513 66418595 -100231701 + Lx9 LINE L1 7265 7347 -297 5 1091 831 273 72 48 chrX 66418645 66419018 -100231278 - Lx8 LINE L1 -29 7444 7063 5 1091 3353 168 121 11 chrX 66419018 66419326 -100230970 + RMER19A LTR ERVK 1 323 -414 5 1091 2874 91 5 8 chrX 66419326 66419723 -100230573 - MTA_Mm LTR MaLR 0 396 1 5 1091 3353 168 121 11 chrX 66419723 66420078 -100230218 + RMER19A LTR ERVK 324 737 0 5 1091 312 151 19 0 chrX 66420144 66420197 -100230099 + Lx6 LINE L1 7096 7149 -311 5 1091 27629 18 1 0 chrX 66420192 66424087 -100226209 - L1Md_T LINE L1 -1 6581 2683 5 1091 424 302 101 0 chrX 66424090 66424239 -100226057 - Lx8 LINE L1 -451 7022 6859 5 1091 369 0 0 0 chrX 66424239 66424280 -100226016 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1091 372 333 73 73 chrX 66424326 66424711 -100225585 - RLTR11A2 LTR ERVK -14 513 129 5 1091 192 135 0 0 chrX 66424767 66424804 -100225492 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1091 444 128 0 0 chrX 66425185 66425263 -100225033 + (TATG)n Simple_repeat Simple_repeat 3 80 0 5 1091 197 228 22 25 chrX 66425506 66425559 -100224737 - MIRm SINE MIR -201 67 16 5 1091 3230 158 35 5 chrX 66425691 66426462 -100223834 - Lx4B LINE L1 -863 6195 5397 5 1091 3096 235 61 10 chrX 66426448 66427218 -100223078 + Lx2B LINE L1 6192 7000 0 6 1091 238 111 31 31 chrX 66427710 66427775 -100222521 + (TCTCTG)n Simple_repeat Simple_repeat 4 68 0 6 1091 505 290 0 0 chrX 66428407 66428514 -100221782 + MER58A DNA MER1_type 4 110 -114 6 1091 1725 173 48 12 chrX 66429131 66429464 -100220832 - Lx4B LINE L1 -791 6267 5923 6 1091 233 261 0 44 chrX 66429539 66429607 -100220689 + MER112 DNA MER1_type 107 171 -90 6 1091 788 197 7 0 chrX 66429694 66429841 -100220455 + B1_Mus1 SINE Alu 1 148 0 6 1091 587 274 0 7 chrX 66429968 66430104 -100220192 + B1_Mur1 SINE Alu 1 135 -14 6 1091 236 53 26 0 chrX 66430382 66430420 -100219876 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 1091 225 0 0 0 chrX 66430475 66430500 -100219796 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1091 204 344 139 14 chrX 66430575 66430790 -100219506 - L2 LINE L2 -349 3070 2829 6 1091 206 275 53 42 chrX 66430945 66431040 -100219256 - MIRb SINE MIR -2 266 171 6 1091 334 239 4 70 chrX 66431307 66431407 -100218889 + PB1 SINE Alu 41 125 -24 6 1091 241 250 14 14 chrX 66431463 66431532 -100218764 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 1091 5239 153 14 11 chrX 66432071 66433578 -100216718 + L1VL4 LINE L1 135 1647 -1912 6 1091 37574 21 2 1 chrX 66433574 66438851 -100211445 + L1Md_A LINE L1 346 5586 -297 6 1091 8830 13 0 0 chrX 66438851 66439847 -100210449 + L1Md_A LINE L1 5587 6582 0 6 1091 315 150 26 0 chrX 66439862 66439948 -100210348 + L1_Mm LINE L1 1967 2058 -1856 6 1091 4070 55 2 0 chrX 66439940 66440446 -100209850 - L1Md_F2 LINE L1 -332 6250 5744 6 1091 589 202 8 0 chrX 66440432 66440551 -100209745 + L1_Mur2 LINE L1 5101 5220 -657 6 1091 3083 26 0 5 chrX 66440551 66440932 -100209364 - MTA_Mm LTR MaLR 0 396 18 6 1091 3662 122 11 4 chrX 66440935 66441486 -100208810 + L1_Mm LINE L1 5225 5779 -104 6 1091 6029 101 15 3 chrX 66441707 66442587 -100207709 + L1_Mus3 LINE L1 5747 6636 -2 6 1091 283 170 0 70 chrX 66442587 66442633 -100207663 + ORR1B2 LTR MaLR 16 61 -306 6 1091 202 307 40 13 chrX 66443796 66443872 -100206424 - MIRc SINE MIR -90 178 101 6 1091 1824 179 31 20 chrX 66444447 66444805 -100205491 + ORR1B2 LTR MaLR 6 367 0 6 1091 217 373 91 22 chrX 66445062 66445336 -100204960 + L2a LINE L2 2913 3205 -221 6 1091 205 263 145 0 chrX 66445391 66445467 -100204829 + L2a LINE L2 3293 3379 -47 6 1091 430 231 81 6 chrX 66446643 66446804 -100203492 - Lx9 LINE L1 -7 7637 7465 6 1091 6441 175 20 11 chrX 66446990 66449169 -100201127 - Lx5 LINE L1 -185 6865 4658 6 1091 2402 115 57 2 chrX 66449196 66449616 -100200680 - Lx5 LINE L1 -1847 4030 3588 6 1091 5680 152 60 38 chrX 66449611 66451124 -100199172 - Lx5 LINE L1 -3445 2432 893 6 1091 182 294 29 14 chrX 66453341 66453410 -100196886 - L2c LINE L2 -59 3328 3259 6 136 214 315 27 0 chrX 66453458 66453531 -100196765 + MER5B DNA MER1_type 10 84 -94 6 1092 264 59 0 0 chrX 66453722 66453756 -100196540 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1092 254 384 0 0 chrX 66453827 66453913 -100196383 - MER5B DNA MER1_type -50 128 43 6 1092 373 252 96 16 chrX 66455270 66455395 -100194901 + B4A SINE B4 106 240 -52 6 1092 1683 185 79 0 chrX 66455398 66455776 -100194520 + Lx9 LINE L1 7046 7453 -191 6 1092 1374 196 191 12 chrX 66455794 66456129 -100194167 + MTD LTR MaLR 8 402 -17 6 1092 359 231 60 0 chrX 66456129 66456263 -100194033 + Lx9 LINE L1 7502 7643 -1 6 1092 282 226 0 0 chrX 66456271 66456333 -100193963 + B4A SINE B4 216 277 -15 6 1092 401 234 0 7 chrX 66456754 66456892 -100193404 + (TG)n Simple_repeat Simple_repeat 2 138 0 6 1092 289 352 90 14 chrX 66457876 66458020 -100192276 - L2a LINE L2 -254 3172 3018 6 1092 285 280 40 0 chrX 66459024 66459099 -100191197 - ID4 SINE ID -4 79 2 6 1092 249 208 111 0 chrX 66459170 66459242 -100191054 + L1M5 LINE L1 5494 5573 -606 6 1092 2554 124 37 25 chrX 66459250 66459705 -100190591 - MusHAL1 LINE L1 -300 2412 1955 6 1092 208 0 62 0 chrX 66459705 66459737 -100190559 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1092 2554 124 37 25 chrX 66459737 66459795 -100190501 - MusHAL1 LINE L1 -758 1954 1894 6 1092 3454 80 53 6 chrX 66459799 66460291 -100190005 - Lx3_Mus LINE L1 -8 7001 6487 6 1092 1846 122 20 26 chrX 66460292 66460611 -100189685 + L1_Mur1 LINE L1 5063 5386 -500 6 1092 6191 7 0 4 chrX 66460611 66461303 -100188993 + L1Md_T LINE L1 5894 6582 0 6 1092 1846 122 20 26 chrX 66461303 66461327 -100188969 + L1_Mur1 LINE L1 5387 5404 -482 6 1092 1829 103 24 0 chrX 66461327 66461618 -100188678 - MusHAL1 LINE L1 -800 1912 1615 6 1092 8782 145 3 5 chrX 66461630 66463701 -100186595 + L1_Mus4 LINE L1 4207 6272 -364 6 1092 383 289 0 80 chrX 66463701 66463713 -100186583 + MT2B LTR ERVL 154 156 -445 6 1092 1077 123 0 0 chrX 66463713 66463859 -100186437 + B1_Mus2 SINE Alu 2 147 0 6 1092 243 0 0 87 chrX 66463859 66463905 -100186391 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 6 1092 2309 114 23 3 chrX 66463908 66464261 -100186035 + Lx LINE L1 6270 6629 -25 6 1092 3913 63 0 1 chrX 66464259 66464938 -100185358 + L1Md_F3 LINE L1 5338 6015 -569 6 1092 486 0 0 0 chrX 66464995 66465049 -100185247 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1092 582 15 0 0 chrX 66465460 66465527 -100184769 + (TC)n Simple_repeat Simple_repeat 1 67 0 6 1092 492 116 0 0 chrX 66465889 66465984 -100184312 + (CAGA)n Simple_repeat Simple_repeat 2 96 0 6 1092 198 150 0 0 chrX 66466008 66466048 -100184248 + (GA)n Simple_repeat Simple_repeat 2 41 0 6 1092 180 0 0 0 chrX 66466348 66466368 -100183928 + (TC)n Simple_repeat Simple_repeat 2 21 0 6 1092 1127 78 0 0 chrX 66466370 66466511 -100183785 - B1_Mm SINE Alu -6 141 1 6 1092 214 362 109 33 chrX 66468073 66468256 -100182040 - MIRb SINE MIR -58 210 14 6 1092 23 33 0 0 chrX 66469197 66469227 -100181069 + AT_rich Low_complexity Low_complexity 1 30 0 6 1092 901 163 0 0 chrX 66470352 66470493 -100179803 + B1_Mur4 SINE Alu 3 143 -7 6 1092 4768 217 51 20 chrX 66470663 66471499 -100178797 + Lx7 LINE L1 6504 7341 -355 6 1092 2331 158 179 48 chrX 66471499 66472109 -100178187 - RMER6C LTR ERVK 0 690 1 6 1092 4768 217 51 20 chrX 66472109 66472122 -100178174 + Lx7 LINE L1 7342 7354 -342 6 1092 456 19 0 0 chrX 66472122 66472175 -100178121 + (TCTA)n Simple_repeat Simple_repeat 1 53 0 6 1092 4768 217 51 20 chrX 66472175 66472481 -100177815 + Lx7 LINE L1 7355 7695 -1 6 1092 190 356 13 52 chrX 66472489 66472566 -100177730 + MIRc SINE MIR 13 86 -182 6 1092 22 35 0 0 chrX 66472595 66472624 -100177672 + AT_rich Low_complexity Low_complexity 1 29 0 6 1092 224 130 22 0 chrX 66473747 66473793 -100176503 + (TATG)n Simple_repeat Simple_repeat 2 48 0 6 1092 5509 76 3 1 chrX 66473975 66474699 -100175597 + L1_Mus3 LINE L1 5913 6637 -1 6 1092 649 240 72 25 chrX 66476527 66476762 -100173534 + Lx5 LINE L1 5986 6231 -819 6 1092 1984 213 44 13 chrX 66476759 66477211 -100173085 + Lx4B LINE L1 6593 7058 0 6 1092 623 270 89 20 chrX 66477467 66477713 -100172583 - MER2 DNA MER2_type -74 271 9 6 1092 548 281 94 61 chrX 66477708 66477985 -100172311 + MLT1B LTR MaLR 98 383 -7 6 1092 262 211 155 0 chrX 66478593 66478664 -100171632 - MTE2a LTR MaLR 0 379 298 6 1092 537 304 36 0 chrX 66478667 66478805 -100171491 - MTE2a LTR MaLR -236 143 1 6 1092 330 306 28 9 chrX 66479385 66479494 -100170802 - MIR SINE MIR -35 227 117 6 1092 5757 93 5 4 chrX 66479811 66481175 -100169121 + L1_Mus3 LINE L1 5054 6419 -219 6 1092 460 108 12 0 chrX 66481175 66481258 -100169038 + L1_Mus3 LINE L1 6551 6634 -4 6 1092 603 27 0 0 chrX 66481449 66481522 -100168774 + (CA)n Simple_repeat Simple_repeat 1 73 0 6 1092 7344 92 4 3 chrX 66482013 66483145 -100167151 - L1_Mus3 LINE L1 -1 6637 5506 6 1092 222 275 56 28 chrX 66483207 66483278 -100167018 - MIRm SINE MIR -108 168 96 6 1092 1499 221 21 63 chrX 66483278 66483659 -100166637 + ORR1D1 LTR MaLR 1 365 -9 6 1092 316 344 38 8 chrX 66483665 66483797 -100166499 - MIR SINE MIR -112 150 15 6 1092 351 350 55 30 chrX 66483807 66483972 -100166324 - MER58B DNA MER1_type -12 329 161 6 1092 1760 35 0 4 chrX 66484085 66484316 -100165980 - L1_Mm LINE L1 -427 5456 5227 6 1092 7827 32 3 4 chrX 66484316 66485251 -100165045 + L1Md_F2 LINE L1 5646 6579 -3 6 1092 27 0 0 0 chrX 66485331 66485358 -100164938 + AT_rich Low_complexity Low_complexity 1 27 0 6 1092 639 126 0 0 chrX 66485359 66485454 -100164842 + URR1B DNA MER1_type 131 225 0 6 1092 356 377 64 15 chrX 66486915 66487117 -100163179 + MIR SINE MIR 3 214 -48 6 1092 434 252 31 47 chrX 66487995 66488124 -100162172 + Tigger7 DNA MER2_type 2196 2322 -169 6 1092 1566 36 0 0 chrX 66488185 66488377 -100161919 + L1Md_F2 LINE L1 5394 5585 -298 6 1092 8038 42 7 5 chrX 66488378 66489372 -100160924 + L1Md_F2 LINE L1 5587 6582 0 6 1092 3445 127 48 33 chrX 66489375 66490037 -100160259 + RMER17D2 LTR ERVK 138 809 0 6 1092 4745 144 13 5 chrX 66490037 66490082 -100160214 - Lx4A LINE L1 -671 6387 6343 6 1092 4494 57 20 5 chrX 66490082 66490666 -100159630 - L1Md_F2 LINE L1 -12 6570 5978 6 1092 4745 144 13 5 chrX 66490666 66491415 -100158881 - Lx4A LINE L1 -716 6342 5588 6 1092 1936 116 10 0 chrX 66491418 66491728 -100158568 + Lx4A LINE L1 5247 5559 -318 6 1092 665 282 112 51 chrX 66491860 66492330 -100157966 - L1MC1 LINE L1 -1495 6290 5816 6 1092 287 61 0 39 chrX 66492330 66492381 -100157915 + (TCTCTG)n Simple_repeat Simple_repeat 4 52 0 6 1092 700 248 124 11 chrX 66492381 66492938 -100157358 - L1MC1 LINE L1 -518 5815 5137 6 1092 364 257 219 5 chrX 66493083 66493302 -100156994 - L1MC1 LINE L1 -1246 4900 4635 6 1092 203 204 37 0 chrX 66493324 66493378 -100156918 + (TCTG)n Simple_repeat Simple_repeat 3 58 0 6 1092 491 326 33 95 chrX 66493564 66493869 -100156427 - L2 LINE L2 -417 3002 2717 6 1092 208 139 0 0 chrX 66494010 66494046 -100156250 + (A)n Simple_repeat Simple_repeat 1 36 0 6 1092 968 134 30 6 chrX 66494384 66494549 -100155747 - B2_Mm2 SINE B2 -26 169 1 6 1092 599 243 64 17 chrX 66494712 66494884 -100155412 + Lx6 LINE L1 7255 7434 -26 6 1092 329 278 101 41 chrX 66494998 66495216 -100155080 + L1VL1 LINE L1 45 275 -6147 6 1092 295 221 136 93 chrX 66495266 66495297 -100154999 + L1_Mus1 LINE L1 667 693 -5926 6 1092 3226 77 34 5 chrX 66495297 66495739 -100154557 - L1Md_F2 LINE L1 -12 6570 6116 6 1092 295 221 136 93 chrX 66495739 66495847 -100154449 + L1_Mus1 LINE L1 694 812 -5807 6 1092 2300 198 8 3 chrX 66495851 66496398 -100153898 + L1_Mus1 LINE L1 730 1212 -5877 6 1092 950 119 59 13 chrX 66496368 66496587 -100153709 + L1_Mus1 LINE L1 1003 1307 -5334 6 1092 4095 95 2 0 chrX 66496582 66497180 -100153116 - L1_Mm LINE L1 -466 5417 4819 6 1092 2352 65 28 0 chrX 66497178 66497502 -100152794 + L1_Mm LINE L1 5412 5744 -139 6 1092 8812 89 8 1 chrX 66497498 66499508 -100150788 + L1_Mus1 LINE L1 4540 6566 -4 6 1092 2143 123 0 10 chrX 66499613 66499998 -100150298 + L1Md_Gf LINE L1 8 388 -6134 6 1092 35089 44 3 3 chrX 66500000 66505103 -100145193 + L1Md_T LINE L1 391 5589 -297 1 1092 8397 28 9 0 chrX 66505103 66506090 -100144206 + L1Md_T LINE L1 5590 6585 0 1 1092 293 304 17 51 chrX 66506186 66506304 -100143992 - MLT1C LTR MaLR -327 140 27 2 1092 2145 282 54 69 chrX 66506532 66507442 -100142854 + Lx5 LINE L1 6226 7047 -11 3 1092 566 331 6 31 chrX 66507579 66507741 -100142555 + RSINE1 SINE B4 4 161 -4 4 1092 266 125 0 20 chrX 66507765 66507814 -100142482 + (TAA)n Simple_repeat Simple_repeat 2 49 0 5 1092 464 93 0 13 chrX 66507829 66507905 -100142391 + (TAG)n Simple_repeat Simple_repeat 1 75 0 6 1092 243 0 0 0 chrX 66508791 66508818 -100141478 + (TC)n Simple_repeat Simple_repeat 2 28 0 7 1092 369 0 0 0 chrX 66508818 66508858 -100141438 + (TA)n Simple_repeat Simple_repeat 2 42 0 8 1092 836 168 0 0 chrX 66509184 66509315 -100140981 + B1_Mur4 SINE Alu 3 133 -17 9 1092 565 193 97 0 chrX 66509316 66509430 -100140866 + B1_Mur3 SINE Alu 19 143 -6 1 1092 1377 84 0 5 chrX 66509879 66510082 -100140214 - L1_Mus4 LINE L1 -3 6633 6432 1 1092 225 260 0 0 chrX 66510138 66510188 -100140108 + (CATG)n Simple_repeat Simple_repeat 4 53 0 1 1092 252 347 23 31 chrX 66510730 66510858 -100139438 - MIR SINE MIR -96 166 40 1 1092 181 388 89 24 chrX 66511577 66511746 -100138550 + MIRc SINE MIR 43 222 -46 1 1092 872 80 0 0 chrX 66512038 66512163 -100138133 + L1_Mus2 LINE L1 6440 6564 -2 1 1092 3480 18 0 2 chrX 66512197 66512594 -100137702 + MTA_Mm LTR MaLR 1 396 0 1 1092 353 260 140 0 chrX 66513601 66513751 -100136545 + L1MA8 LINE L1 6009 6179 -112 1 1092 27 29 0 0 chrX 66513805 66513839 -100136457 + AT_rich Low_complexity Low_complexity 1 34 0 1 1092 1299 248 92 0 chrX 66513976 66514290 -100136006 - MTE2b LTR MaLR 0 379 37 1 1092 324 293 153 45 chrX 66514463 66514731 -100135565 + L2a LINE L2 3118 3414 -12 2 1092 182 311 103 29 chrX 66514776 66514912 -100135384 - L2c LINE L2 -52 3335 3190 2 1092 282 160 0 0 chrX 66515770 66515820 -100134476 + (ATG)n Simple_repeat Simple_repeat 2 51 0 2 1092 1681 143 5 0 chrX 66515935 66516223 -100134073 - L1_Mm LINE L1 -2436 5559 5240 2 1092 7770 51 13 1 chrX 66516223 66517258 -100133038 + L1_Mus2 LINE L1 5520 6566 0 2 1092 274 157 29 19 chrX 66517270 66517321 -100132975 + A-rich Low_complexity Low_complexity 2 53 0 2 1092 1136 49 7 0 chrX 66517321 66517464 -100132832 + B1_Mus1 SINE Alu 5 148 0 2 1092 274 157 29 19 chrX 66517464 66517516 -100132780 + A-rich Low_complexity Low_complexity 54 106 0 2 1092 386 281 193 11 chrX 66517517 66517787 -100132509 + L1MB5 LINE L1 5815 6133 -41 2 1092 3024 48 5 30 chrX 66517793 66518196 -100132100 - L1Md_F2 LINE L1 0 6582 6190 2 1092 206 376 52 64 chrX 66518215 66518388 -100131908 - L2c LINE L2 -1362 2057 1887 2 1092 229 254 48 0 chrX 66518404 66518467 -100131829 - ORR1E LTR MaLR 0 379 314 3 1092 280 300 89 45 chrX 66518497 66518654 -100131642 - ORR1E LTR MaLR -108 251 88 3 1092 21 36 0 0 chrX 66519531 66519559 -100130737 + AT_rich Low_complexity Low_complexity 1 28 0 3 1092 2205 75 69 0 chrX 66520657 66520963 -100129333 - ORR1A2 LTR MaLR 0 327 1 3 1092 222 351 21 0 chrX 66521624 66521718 -100128578 - MIRb SINE MIR -70 198 103 3 1092 642 206 71 0 chrX 66521853 66521994 -100128302 - Lx5 LINE L1 -8 7042 6892 3 1092 3585 127 38 0 chrX 66522901 66523451 -100126845 - Lx2 LINE L1 0 6997 6427 3 1092 2548 95 8 13 chrX 66523451 66523824 -100126472 + Lx2 LINE L1 6092 6462 -535 3 1092 970 251 78 29 chrX 66524009 66524251 -100126045 + Lx6 LINE L1 7003 7256 -204 3 1092 32705 89 13 13 chrX 66524248 66530303 -100119993 - L1Md_F2 LINE L1 -2 6580 528 3 1092 795 268 21 0 chrX 66530314 66530508 -100119788 + Lx6 LINE L1 7253 7450 -10 3 1092 1838 170 6 36 chrX 66530562 66530898 -100119398 + ORR1C1 LTR MaLR 2 327 -51 3 1092 231 336 65 9 chrX 66530917 66531025 -100119271 - MIRb SINE MIR -141 127 14 3 1092 204 222 0 0 chrX 66531596 66531632 -100118664 - L2b LINE L2 -229 3146 3111 3 1092 1341 201 173 8 chrX 66531632 66531984 -100118312 + Lx5 LINE L1 6050 6459 -591 4 1092 4574 161 9 35 chrX 66531970 66532030 -100118266 - L1_Mur3 LINE L1 -3748 2129 2084 4 1092 393 22 0 0 chrX 66532030 66532076 -100118220 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1092 4574 177 14 38 chrX 66532076 66533274 -100117022 - L1_Mur3 LINE L1 -3794 2083 904 4 1092 595 292 6 19 chrX 66533997 66534154 -100116142 + RSINE1 SINE B4 4 158 -7 4 1092 215 133 22 0 chrX 66534164 66534209 -100116087 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 4 1092 1556 62 5 9 chrX 66534229 66534440 -100115856 - L1Md_F2 LINE L1 -12 6570 6361 4 1092 4381 29 2 0 chrX 66534440 66534953 -100115343 - L1Md_T LINE L1 -1 6581 6068 4 1092 1878 31 5 0 chrX 66534953 66535175 -100115121 - L1Md_F2 LINE L1 -222 6360 6138 4 1092 543 250 0 20 chrX 66535175 66535277 -100115019 + RSINE1 SINE B4 59 158 -7 4 1092 284 102 20 0 chrX 66535287 66535336 -100114960 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 4 1092 3069 129 7 63 chrX 66536555 66537108 -100113188 - Lx2A LINE L1 0 7008 6487 4 1092 746 123 17 99 chrX 66537111 66537283 -100113013 - L1_Mus3 LINE L1 -4 6634 6477 5 1092 1617 79 0 0 chrX 66537283 66537499 -100112797 + L1_Mus3 LINE L1 6251 6466 -172 5 1092 4709 129 19 1 chrX 66537494 66538222 -100112074 - Lx2A LINE L1 -505 6503 5753 4 1092 1330 112 71 5 chrX 66538774 66538998 -100111298 + Lx3_Mus LINE L1 6771 7009 0 5 1092 192 316 77 70 chrX 66539019 66539162 -100111134 + L2a LINE L2 3028 3171 -255 5 1092 510 312 56 43 chrX 66539302 66539533 -100110763 + B4A SINE B4 8 241 -51 5 1092 414 0 0 0 chrX 66539677 66539723 -100110573 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1092 546 89 0 0 chrX 66539723 66539813 -100110483 + (GA)n Simple_repeat Simple_repeat 1 90 0 5 1092 489 295 45 9 chrX 66539966 66540137 -100110159 - MLT1A1 LTR MaLR -24 384 226 5 1092 406 240 72 10 chrX 66540266 66540363 -100109933 - L2a LINE L2 -28 3398 3296 5 1092 322 337 132 66 chrX 66540357 66540783 -100109513 - L2 LINE L2 -642 2777 2324 5 1092 22 0 0 0 chrX 66540888 66540910 -100109386 + AT_rich Low_complexity Low_complexity 1 22 0 5 1092 321 172 0 0 chrX 66540948 66541012 -100109284 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 1092 300 233 30 15 chrX 66541036 66541167 -100109129 + (TA)n Simple_repeat Simple_repeat 1 133 0 6 1092 447 52 0 0 chrX 66541170 66541228 -100109068 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 1092 332 356 126 25 chrX 66541239 66541637 -100108659 - L2 LINE L2 -1223 2196 1759 5 1092 507 273 289 8 chrX 66541893 66542287 -100108009 - Arthur1 DNA Tip100 -245 3702 3200 6 1092 274 336 44 9 chrX 66542526 66542640 -100107656 - Arthur1 DNA Tip100 -3717 230 113 6 1092 589 406 25 28 chrX 66542643 66542927 -100107369 + B4A SINE B4 2 284 -8 6 1092 276 30 0 0 chrX 66542954 66542987 -100107309 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 6 1092 248 220 0 20 chrX 66543002 66543053 -100107243 + GA-rich Low_complexity Low_complexity 4 53 0 6 1092 218 98 0 47 chrX 66543055 66543098 -100107198 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 6 1092 306 309 63 8 chrX 66543324 66543451 -100106845 + MLT1L LTR MaLR 434 567 -43 6 1092 24 0 0 0 chrX 66543642 66543666 -100106630 + AT_rich Low_complexity Low_complexity 1 24 0 6 1092 25502 83 79 8 chrX 66543803 66545739 -100104557 - L1Md_F2 LINE L1 -14 6568 4645 6 1092 3412 23 5 0 chrX 66545739 66546133 -100104163 - MTA_Mm LTR MaLR 0 396 1 7 1092 25502 126 146 18 chrX 66546133 66549878 -100100418 - L1Md_F2 LINE L1 -1239 4644 217 6 1092 528 374 63 58 chrX 66550470 66551191 -100099105 - L2c LINE L2 -21 3366 2641 7 1092 296 282 81 37 chrX 66551547 66551683 -100098613 + MLT1A1 LTR MaLR 267 408 0 7 1092 684 294 18 55 chrX 66551688 66552015 -100098281 + L1M5 LINE L1 5311 5625 -539 7 1092 532 319 12 48 chrX 66552393 66552561 -100097735 - RSINE1 SINE B4 0 165 4 7 1092 424 319 75 24 chrX 66553039 66553251 -100097045 - Lx8 LINE L1 -360 7113 6891 7 1092 208 368 92 23 chrX 66553267 66553484 -100096812 - L2 LINE L2 -614 2805 2574 7 1092 351 278 10 10 chrX 66553548 66553646 -100096650 + MIRb SINE MIR 171 268 0 7 1092 285 256 64 43 chrX 66553647 66553741 -100096555 + L2 LINE L2 1262 1357 -2062 7 1092 689 255 20 14 chrX 66554072 66554283 -100096013 + MIRb SINE MIR 44 262 0 7 1092 273 89 0 0 chrX 66554943 66554988 -100095308 + (A)n Simple_repeat Simple_repeat 1 45 0 8 1092 597 318 48 34 chrX 66556629 66556922 -100093374 - L1_Mur2 LINE L1 -232 5645 5349 8 1092 372 250 12 0 chrX 66557422 66557506 -100092790 - PB1D10 SINE Alu -10 107 23 8 1092 604 306 136 52 chrX 66557527 66557813 -100092483 - MLT1A0 LTR MaLR -40 325 16 8 1092 579 311 105 48 chrX 66558764 66559240 -100091056 + L1MB7 LINE L1 5628 6130 -54 8 1092 1830 130 3 32 chrX 66560162 66560181 -100090115 - Lx3_Mus LINE L1 -6 7003 6987 8 1092 189 0 0 0 chrX 66560181 66560202 -100090094 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 8 1092 1830 130 3 32 chrX 66560202 66560492 -100089804 - Lx3_Mus LINE L1 -23 6986 6703 8 1092 259 182 0 0 chrX 66561477 66561521 -100088775 + PB1D10 SINE Alu 7 50 -67 8 1092 1059 340 153 22 chrX 66562995 66563768 -100086528 + L2a LINE L2 709 1582 -1837 8 1092 796 292 104 40 chrX 66563775 66564149 -100086147 + L2a LINE L2 2005 2402 -1017 8 1092 222 348 64 14 chrX 66564162 66564302 -100085994 + L2a LINE L2 3224 3370 -56 8 1092 186 43 0 0 chrX 66565055 66565078 -100085218 + (T)n Simple_repeat Simple_repeat 1 23 0 8 1092 2448 278 58 51 chrX 66565175 66565432 -100084864 - Lx9 LINE L1 -451 7193 6950 9 1092 2220 175 57 5 chrX 66565432 66565874 -100084422 - Lx LINE L1 -3 6651 6187 9 1092 2448 278 58 51 chrX 66565874 66566445 -100083851 - Lx9 LINE L1 -695 6949 6359 9 1092 522 246 83 27 chrX 66566452 66566723 -100083573 + Lx9 LINE L1 7255 7559 -85 9 1092 474 18 0 0 chrX 66566723 66566778 -100083518 + (GA)n Simple_repeat Simple_repeat 1 55 0 9 1092 237 180 127 45 chrX 66566778 66566838 -100083458 + Lx9 LINE L1 7560 7624 -20 9 1092 622 345 53 22 chrX 66566950 66567273 -100083023 - MLT1B LTR MaLR -57 333 1 9 1092 21 104 0 0 chrX 66567407 66567484 -100082812 + AT_rich Low_complexity Low_complexity 1 77 0 9 1092 425 319 0 47 chrX 66567498 66567669 -100082627 - RSINE1 SINE B4 0 165 3 9 1092 1641 96 20 4 chrX 66568191 66568442 -100081854 - L1_Mus4 LINE L1 -4 6632 6378 9 1092 27 29 0 0 chrX 66568787 66568821 -100081475 + AT_rich Low_complexity Low_complexity 1 34 0 9 1092 271 359 147 6 chrX 66569029 66569186 -100081110 + MamGypLTR1a LTR Gypsy 496 674 -110 9 1092 210 396 22 0 chrX 66570471 66570562 -100079734 - L2b LINE L2 -48 3327 3235 1 1092 571 182 23 0 chrX 66571491 66571623 -100078673 + L1MA9 LINE L1 6178 6312 0 1 1092 4469 96 42 0 chrX 66571978 66572622 -100077674 - L1_Mus3 LINE L1 -2 6636 5966 1 1092 3332 106 30 2 chrX 66572624 66573202 -100077094 + L1_Mus3 LINE L1 5379 5968 -670 1 1092 23 33 0 0 chrX 66573804 66573834 -100076462 + AT_rich Low_complexity Low_complexity 1 30 0 1 1092 27 29 0 0 chrX 66574003 66574037 -100076259 + AT_rich Low_complexity Low_complexity 1 34 0 1 1092 576 0 0 0 chrX 66574059 66574123 -100076173 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 1 1092 1268 199 39 107 chrX 66575606 66575915 -100074381 + MTC LTR MaLR 134 421 0 1 1092 257 390 16 8 chrX 66575919 66576043 -100074253 + MTE2a LTR MaLR 72 196 -183 1 1092 593 73 0 10 chrX 66576051 66576148 -100074148 + (TTTTA)n Simple_repeat Simple_repeat 4 99 0 1 1092 8262 44 3 0 chrX 66576204 66577614 -100072682 - L1Md_F2 LINE L1 -1 6581 5168 1 1092 2854 97 0 0 chrX 66577613 66578005 -100072291 + L1Md_F2 LINE L1 4753 5144 -739 1 1092 286 297 77 51 chrX 66579207 66579324 -100070972 - MIRm SINE MIR 0 276 157 1 1092 378 0 0 0 chrX 66579460 66579502 -100070794 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1092 230 212 186 12 chrX 66579632 66579718 -100070578 - MER5A1 DNA MER1_type -5 161 61 1 1092 7883 52 6 0 chrX 66579718 66581109 -100069187 - L1Md_F3 LINE L1 -14 6570 5171 1 1092 263 261 14 28 chrX 66581109 66581180 -100069116 - MER5A1 DNA MER1_type -94 72 3 1 1092 315 0 0 0 chrX 66582513 66582548 -100067748 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1092 1824 293 75 64 chrX 66582600 66582655 -100067641 - Lx8 LINE L1 -86 7387 7331 1 1092 1449 81 5 0 chrX 66582655 66582853 -100067443 - L1_Mus1 LINE L1 0 6567 6369 1 1092 1824 293 75 64 chrX 66582853 66583621 -100066675 - Lx8 LINE L1 -143 7330 6555 1 136 4753 199 32 14 chrX 66583648 66584779 -100065517 - Lx4B LINE L1 -4 6996 5841 1 1093 830 230 100 46 chrX 66584756 66585016 -100065280 - Lx8 LINE L1 -932 6541 6268 1 1093 365 367 23 0 chrX 66585217 66585345 -100064951 - MLT1A1 LTR MaLR -257 151 21 1 1093 299 370 21 10 chrX 66585842 66586027 -100064269 - MIR SINE MIR -81 187 3 1 1093 226 64 0 78 chrX 66586502 66586553 -100063743 + (CAAAA)n Simple_repeat Simple_repeat 4 50 0 1 1093 434 75 15 0 chrX 66587393 66587460 -100062836 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 1093 335 194 10 0 chrX 66587466 66587564 -100062732 + GA-rich Low_complexity Low_complexity 2 100 0 1 1093 422 0 0 36 chrX 66587822 66587877 -100062419 + (TTTTA)n Simple_repeat Simple_repeat 3 55 0 1 1093 6050 143 50 5 chrX 66587877 66588899 -100061397 - Lx2 LINE L1 -22 6975 5908 1 1093 414 0 0 0 chrX 66588922 66588968 -100061328 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1093 255 31 0 0 chrX 66589199 66589231 -100061065 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1093 295 256 0 25 chrX 66589554 66589634 -100060662 + MLT1A1 LTR MaLR 328 405 -3 1 1093 355 324 40 66 chrX 66589818 66590016 -100060280 - MIRb SINE MIR -60 208 16 1 1093 213 39 0 0 chrX 66590134 66590160 -100060136 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1093 3140 24 0 3 chrX 66590233 66590604 -100059692 - L1Md_T LINE L1 0 6582 6213 1 1093 279 0 0 0 chrX 66591384 66591415 -100058881 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 1 1093 309 325 171 37 chrX 66591960 66592177 -100058119 + MIRc SINE MIR 17 262 -6 1 1093 203 171 0 0 chrX 66592499 66592540 -100057756 + A-rich Low_complexity Low_complexity 2 42 0 1 1093 882 117 25 0 chrX 66593342 66593505 -100056791 - L1_Mus3 LINE L1 -1 6637 6471 1 1093 264 226 0 0 chrX 66593633 66593695 -100056601 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 1093 406 334 87 84 chrX 66593830 66594245 -100056051 + L1MC4 LINE L1 36 451 -5764 1 1093 349 329 29 53 chrX 66594317 66594487 -100055809 + L1MC4 LINE L1 446 611 -5604 1 1093 265 309 84 40 chrX 66594987 66595284 -100055012 - L1MC LINE L1 -3450 2696 2387 1 1093 449 202 0 0 chrX 66595410 66595494 -100054802 + L1MC4 LINE L1 2472 2555 -3660 1 1093 12989 165 27 23 chrX 66595523 66598914 -100051382 - Lx3C LINE L1 -51 6958 3667 1 1093 1401 24 0 0 chrX 66598914 66599079 -100051217 + (TTC)n Simple_repeat Simple_repeat 3 167 0 1 1093 252 59 0 0 chrX 66599079 66599113 -100051183 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 1093 15416 100 24 14 chrX 66599213 66600918 -100049378 - Lx3_Mus LINE L1 -5 7004 5284 1 1093 201 39 0 0 chrX 66600918 66600944 -100049352 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1093 15416 178 79 50 chrX 66600944 66604515 -100045781 - Lx3_Mus LINE L1 -603 5283 1611 1 1093 416 227 9 35 chrX 66604529 66604643 -100045653 - Lx3_Mus LINE L1 -6857 127 17 1 1093 739 149 17 85 chrX 66604673 66604849 -100045447 - ORR1C2 LTR MaLR -220 164 1 1 1093 629 202 236 12 chrX 66604963 66605128 -100045168 - B3 SINE B2 -12 204 3 1 1093 637 247 19 52 chrX 66606751 66606905 -100043391 - B1_Mur4 SINE Alu 0 150 2 1 1093 216 241 106 24 chrX 66608337 66608422 -100041874 - MIRc SINE MIR 0 268 177 1 1093 315 326 121 53 chrX 66609151 66609358 -100040938 + MIRc SINE MIR 17 240 -28 1 1093 222 353 161 16 chrX 66609333 66609526 -100040770 + MIRb SINE MIR 29 249 -19 1 1093 258 39 38 38 chrX 66609999 66610052 -100040244 + (CAAAA)n Simple_repeat Simple_repeat 3 55 0 1 1093 181 309 43 29 chrX 66611722 66611792 -100038504 - L2c LINE L2 -65 3322 3252 1 1093 207 0 0 0 chrX 66612082 66612105 -100038191 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1 1093 275 186 29 10 chrX 66613511 66613614 -100036682 + (CCG)n Simple_repeat Simple_repeat 2 106 0 1 1093 21 36 0 0 chrX 66613937 66613965 -100036331 + GC_rich Low_complexity Low_complexity 1 28 0 1 1093 432 0 0 0 chrX 66617105 66617153 -100033143 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1093 201 271 0 54 chrX 66619056 66619130 -100031166 - MIR SINE MIR -113 149 80 1 1093 370 359 0 20 chrX 66619792 66619940 -100030356 - MIRc SINE MIR -50 218 74 1 1093 338 278 65 0 chrX 66621845 66621953 -100028343 - MIR3 SINE MIR -26 182 68 1 1093 252 185 132 44 chrX 66622194 66622262 -100028034 + PB1D7 SINE Alu 46 119 -1 1 1093 241 288 0 24 chrX 66622694 66622776 -100027520 + Charlie2a DNA MER1_type 1401 1480 -1381 1 1093 215 321 63 18 chrX 66623629 66623740 -100026556 + L2a LINE L2 3311 3426 0 1 1093 207 358 77 16 chrX 66624661 66624843 -100025453 - MIRb SINE MIR -58 210 18 1 1093 606 85 0 0 chrX 66627417 66627511 -100022785 + (TC)n Simple_repeat Simple_repeat 1 94 0 1 1093 261 0 0 0 chrX 66627511 66627540 -100022756 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1093 378 0 0 0 chrX 66628809 66628851 -100021445 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1093 23 0 0 0 chrX 66629254 66629277 -100021019 + AT_rich Low_complexity Low_complexity 1 23 0 1 1093 691 288 0 29 chrX 66629963 66630167 -100020129 + B3A SINE B2 1 198 0 1 1093 186 229 20 20 chrX 66630797 66630846 -100019450 - L3 LINE CR1 -3477 1012 964 1 1093 941 84 0 15 chrX 66630966 66631099 -100019197 - B1_Mus1 SINE Alu -1 147 17 1 1093 245 305 73 0 chrX 66631121 66631203 -100019093 + L3 LINE CR1 4376 4463 -26 1 1093 1114 228 34 79 chrX 66632553 66632906 -100017390 + MER121 Unknown Unknown 15 351 -61 1 1093 997 177 113 0 chrX 66634839 66635042 -100015254 - URR1A DNA MER1_type 0 226 1 1 1093 25 51 0 0 chrX 66635322 66635361 -100014935 + AT_rich Low_complexity Low_complexity 1 39 0 1 1093 217 177 36 48 chrX 66635710 66635727 -100014569 + (CATA)n Simple_repeat Simple_repeat 3 19 0 1 1093 288 0 0 0 chrX 66635727 66635759 -100014537 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 1093 351 0 0 0 chrX 66635759 66635797 -100014499 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1093 217 177 36 48 chrX 66635797 66635861 -100014435 + (CATA)n Simple_repeat Simple_repeat 4 67 0 1 1093 205 137 38 38 chrX 66636831 66636884 -100013412 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 1 1093 495 0 0 0 chrX 66638457 66638512 -100011784 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1093 305 308 90 48 chrX 66638994 66639342 -100010954 - L1MC4a LINE L1 -1053 6989 6591 1 1093 894 289 78 75 chrX 66639579 66640129 -100010167 + L1MC4 LINE L1 7325 7876 -166 1 1093 459 0 0 0 chrX 66640728 66640779 -100009517 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 1093 21 0 0 0 chrX 66640833 66640854 -100009442 + AT_rich Low_complexity Low_complexity 1 21 0 1 1093 2832 189 20 57 chrX 66641037 66641671 -100008625 - RMER19C LTR ERVK 0 611 1 1 1093 881 142 0 6 chrX 66643448 66643604 -100006692 + (TTTC)n Simple_repeat Simple_repeat 2 156 0 1 1093 201 312 25 0 chrX 66644130 66644210 -100006086 + MIRc SINE MIR 179 260 -8 1 1093 202 295 10 50 chrX 66645387 66645487 -100004809 + GA-rich Low_complexity Low_complexity 1 96 0 1 1093 216 308 0 0 chrX 66645432 66645484 -100004812 + polypurine Low_complexity Low_complexity 1 52 0 1 1093 359 304 26 105 chrX 66646000 66646020 -100004276 - ORR1D1 LTR MaLR 0 379 363 1 1093 273 29 0 0 chrX 66646020 66646054 -100004242 + (GTTTG)n Simple_repeat Simple_repeat 1 34 0 1 1093 1294 242 56 77 chrX 66646054 66646265 -100004031 - ORR1D1 LTR MaLR -17 362 143 1 1093 1034 84 0 0 chrX 66646265 66646438 -100003858 + L1_Mus2 LINE L1 6415 6566 0 1 1093 1294 241 56 76 chrX 66646438 66646585 -100003711 - ORR1D1 LTR MaLR -232 142 6 1 1093 358 279 99 62 chrX 66646933 66647334 -100002962 - RLTR15 LTR ERVK -10 349 1 1 1093 201 290 29 0 chrX 66647505 66647574 -100002722 + MIRc SINE MIR 180 250 -18 1 1093 189 321 107 0 chrX 66647677 66647761 -100002535 + MIRb SINE MIR 118 210 -58 1 1093 27 29 0 0 chrX 66648583 66648617 -100001679 + AT_rich Low_complexity Low_complexity 1 34 0 1 1093 263 139 0 0 chrX 66648898 66648941 -100001355 - Lx8 LINE L1 -11 7462 7420 1 1093 1726 204 85 3 chrX 66649348 66649688 -100000608 + ORR1D1 LTR MaLR 1 368 -6 1 1093 4616 65 24 2 chrX 66649703 66650317 -99999979 + L1Md_F2 LINE L1 5955 6582 0 1 1093 198 103 0 0 chrX 66651085 66651114 -99999182 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1093 451 335 83 37 chrX 66651629 66651871 -99998425 - MIRb SINE MIR -12 256 4 1 1093 350 310 0 17 chrX 66655783 66655898 -99994398 + MER5A1 DNA MER1_type 2 114 -52 2 1093 240 86 0 0 chrX 66657076 66657111 -99993185 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 2 1093 633 95 31 16 chrX 66657171 66657299 -99992997 + (TCTCTG)n Simple_repeat Simple_repeat 6 135 0 2 1093 1091 179 36 29 chrX 66657300 66657577 -99992719 - L1_Rod LINE L1 -2899 2948 2670 2 1093 5924 82 1 4 chrX 66657579 66658376 -99991920 - L1_Mus2 LINE L1 -2 6564 5770 2 1093 2059 73 0 0 chrX 66658376 66658636 -99991660 + L1_Mus2 LINE L1 5490 5749 -134 2 1093 4347 214 88 64 chrX 66658632 66659154 -99991142 - L1_Rod LINE L1 -3160 2687 2130 2 1093 1210 61 0 0 chrX 66659154 66659302 -99990994 + B1_Mus1 SINE Alu 1 148 0 2 1093 4347 221 70 55 chrX 66659302 66660675 -99989621 - L1_Rod LINE L1 -3718 2129 743 2 1093 27 49 0 0 chrX 66660954 66660995 -99989301 + AT_rich Low_complexity Low_complexity 1 41 0 2 1093 538 323 0 8 chrX 66661137 66661268 -99989028 - RSINE1 SINE B4 -33 132 3 2 1093 644 287 35 25 chrX 66661755 66661955 -99988341 + B3 SINE B2 3 204 -12 2 1093 235 336 27 9 chrX 66662125 66662236 -99988060 + PB1D10 SINE Alu 3 115 -2 2 1093 205 189 0 0 chrX 66662696 66662733 -99987563 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2 1093 435 261 24 48 chrX 66662771 66662896 -99987400 + RSINE1 SINE B4 2 123 -42 2 1093 21 36 0 0 chrX 66662947 66662975 -99987321 + AT_rich Low_complexity Low_complexity 1 28 0 2 1093 24 0 0 0 chrX 66664626 66664650 -99985646 + AT_rich Low_complexity Low_complexity 1 24 0 2 1093 183 253 71 24 chrX 66665147 66665232 -99985064 - L3b LINE CR1 -305 177 89 2 1093 22 56 0 0 chrX 66666162 66666198 -99984098 + AT_rich Low_complexity Low_complexity 1 36 0 2 1093 309 341 7 80 chrX 66666452 66666589 -99983707 - MER20 DNA MER1_type -91 128 2 2 1093 3074 208 58 90 chrX 66666595 66667575 -99982721 + Lx4B LINE L1 6042 7000 0 2 1093 344 330 92 0 chrX 66667683 66667856 -99982440 - B4A SINE B4 -5 287 99 2 1093 1303 247 37 10 chrX 66668227 66668522 -99981774 + MER77 LTR ERVL 60 362 -245 2 1093 324 0 0 0 chrX 66669272 66669308 -99980988 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1093 554 209 107 42 chrX 66669430 66669645 -99980651 - Charlie5 DNA MER1_type 0 2624 2396 2 1093 448 305 83 40 chrX 66670021 66670207 -99980089 + B4A SINE B4 88 282 -10 2 1093 306 145 26 13 chrX 66670521 66670598 -99979698 + Lx4A LINE L1 6977 7054 -4 2 1093 2469 55 6 58 chrX 66670677 66671022 -99979274 + ORR1A2 LTR MaLR 1 327 0 2 1093 222 356 29 29 chrX 66671103 66671207 -99979089 - MIRm SINE MIR 0 276 173 2 1093 338 341 14 0 chrX 66671698 66671803 -99978493 - PB1D10 SINE Alu 0 127 12 2 1093 259 383 0 21 chrX 66671719 66671815 -99978481 - ID_B1 SINE B4 -48 176 83 2 1093 236 271 73 22 chrX 66671997 66672133 -99978163 + MIR3 SINE MIR 66 208 0 2 1093 252 295 53 9 chrX 66673916 66674029 -99976267 - MIR SINE MIR -122 140 23 2 1093 1634 232 12 3 chrX 66674912 66675241 -99975055 + Lx6 LINE L1 7063 7394 -66 2 1093 344 254 190 38 chrX 66675263 66675447 -99974849 - MER96B DNA hAT -137 280 69 2 1093 278 241 0 0 chrX 66675462 66675520 -99974776 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1093 7982 5 0 0 chrX 66676955 66677849 -99972447 - L1Md_A LINE L1 0 6582 5700 2 1093 236 378 117 19 chrX 66678133 66678287 -99972009 - L2b LINE L2 -153 3222 3054 2 1093 665 73 10 0 chrX 66678605 66678701 -99971595 + (TG)n Simple_repeat Simple_repeat 2 98 0 2 1093 1008 72 0 61 chrX 66679804 66679951 -99970345 - L1_Mus1 LINE L1 -115 6452 6315 2 1093 761 54 0 26 chrX 66679951 66680066 -99970230 + L1Md_F2 LINE L1 6459 6570 -12 2 1093 663 271 58 19 chrX 66681185 66681392 -99968904 + B3 SINE B2 2 216 0 2 1093 23 0 0 0 chrX 66681398 66681421 -99968875 + AT_rich Low_complexity Low_complexity 1 23 0 2 1093 352 354 111 17 chrX 66681636 66681817 -99968479 - MIRb SINE MIR -35 233 36 2 1093 1072 82 0 39 chrX 66681962 66682115 -99968181 + B1_Mus1 SINE Alu 2 148 0 2 1093 257 109 18 0 chrX 66682118 66682173 -99968123 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 2 1093 209 98 24 0 chrX 66682577 66682618 -99967678 + (TTTTTA)n Simple_repeat Simple_repeat 6 47 0 2 1093 312 333 28 83 chrX 66682700 66682916 -99967380 + L2a LINE L2 3222 3425 -1 2 1093 225 206 61 45 chrX 66684152 66684218 -99966078 - Zaphod2 DNA Tip100 -393 3131 3065 2 1093 299 225 40 110 chrX 66684831 66684931 -99965365 + MIR3 SINE MIR 71 163 -45 2 1093 277 383 35 18 chrX 66685890 66686060 -99964236 - MLT1B LTR MaLR 0 467 295 2 1093 527 281 29 68 chrX 66686085 66686291 -99964005 - MLT1B LTR MaLR -159 231 34 2 1093 381 321 61 50 chrX 66686370 66686632 -99963664 - Lx8 LINE L1 -76 7397 7133 2 1093 594 323 59 17 chrX 66686648 66686887 -99963409 + Lx8 LINE L1 6688 6936 -537 2 1093 981 295 78 88 chrX 66686986 66687325 -99962971 + L1MB7 LINE L1 5319 5650 -534 2 1093 2357 60 0 0 chrX 66687325 66687624 -99962672 - L1_Mus2 LINE L1 0 6566 6268 2 1093 981 295 78 88 chrX 66687624 66688010 -99962286 + L1MB7 LINE L1 5651 6037 -147 2 1093 428 208 64 40 chrX 66688161 66688286 -99962010 - MER97c DNA MER1_type? -856 234 107 2 1093 23 33 0 0 chrX 66688895 66688925 -99961371 + AT_rich Low_complexity Low_complexity 1 30 0 2 1093 657 218 7 22 chrX 66689286 66689422 -99960874 + B1_Mur1 SINE Alu 1 134 -15 2 1093 216 0 0 0 chrX 66689423 66689447 -99960849 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1093 21 36 0 0 chrX 66691331 66691359 -99958937 + AT_rich Low_complexity Low_complexity 1 28 0 2 1093 411 21 0 0 chrX 66692455 66692503 -99957793 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1093 1088 292 74 57 chrX 66695717 66696327 -99953969 - L1MC4 LINE L1 -29 8013 7394 2 1093 354 245 40 10 chrX 66696406 66696505 -99953791 - L1MC4 LINE L1 -485 7397 7296 2 1093 562 289 13 19 chrX 66696506 66696661 -99953635 + RSINE1 SINE B4 4 157 -8 2 1093 275 245 57 38 chrX 66696816 66696922 -99953374 + L1M5 LINE L1 5358 5465 -697 2 1093 1180 261 110 20 chrX 66696913 66697366 -99952930 + L1MB8 LINE L1 5676 6169 -9 2 1093 290 233 65 32 chrX 66697562 66697686 -99952610 - L1MC1 LINE L1 -148 6185 6058 2 1093 289 230 15 22 chrX 66697748 66697814 -99952482 + ID_B1 SINE B4 90 161 -131 2 1093 2783 53 11 8 chrX 66697814 66698174 -99952122 - L1Md_F2 LINE L1 -3 6579 6219 2 1093 210 279 144 68 chrX 66698174 66698253 -99952043 + B4A SINE B4 162 250 -42 2 1093 1759 39 0 0 chrX 66698253 66698459 -99951837 + L1_Mm LINE L1 5502 5707 -176 2 1093 2474 88 88 3 chrX 66698654 66699031 -99951265 - Lx LINE L1 -6 6648 6240 2 1093 203 319 0 14 chrX 66699035 66699105 -99951191 + CT-rich Low_complexity Low_complexity 3 71 0 2 1093 579 316 127 53 chrX 66699123 66699744 -99950552 - L1MC4 LINE L1 -889 6993 6327 2 1093 202 297 79 71 chrX 66700215 66700342 -99949954 - L2c LINE L2 -23 3364 3237 2 1093 538 331 5 16 chrX 66700974 66701167 -99949129 - MIR SINE MIR -1 261 71 2 1093 360 64 0 0 chrX 66701486 66701533 -99948763 + (TAA)n Simple_repeat Simple_repeat 3 49 0 2 1093 337 331 18 24 chrX 66701534 66701698 -99948598 - RSINE1 SINE B4 0 165 3 2 1093 38 22 0 0 chrX 66702165 66702210 -99948086 + AT_rich Low_complexity Low_complexity 1 45 0 2 1093 379 250 11 0 chrX 66705691 66705779 -99944517 - Lx5 LINE L1 -400 6650 6562 2 1093 249 189 0 19 chrX 66705761 66705815 -99944481 + Lx4B LINE L1 6524 6576 -482 2 1093 24 85 0 0 chrX 66708152 66708211 -99942085 + AT_rich Low_complexity Low_complexity 1 59 0 2 1093 755 277 48 69 chrX 66708274 66708677 -99941619 - L1M2 LINE L1 -1076 5070 4677 2 1093 189 0 0 0 chrX 66708682 66708703 -99941593 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1093 463 309 71 44 chrX 66708738 66709033 -99941263 + L1MA4 LINE L1 5549 5851 -449 2 1093 299 313 36 44 chrX 66709036 66709173 -99941123 - MIRb SINE MIR -15 253 118 2 1093 821 246 32 42 chrX 66709459 66709675 -99940621 - MTEb LTR MaLR -165 214 1 2 1093 183 205 0 0 chrX 66709755 66709794 -99940502 + CT-rich Low_complexity Low_complexity 1 39 0 2 1093 237 83 0 0 chrX 66709800 66709836 -99940460 + (TAGA)n Simple_repeat Simple_repeat 3 38 0 2 1093 262 294 68 34 chrX 66710123 66710211 -99940085 + PB1D10 SINE Alu 7 97 -20 2 1093 23 0 0 0 chrX 66710219 66710242 -99940054 + AT_rich Low_complexity Low_complexity 1 23 0 2 1093 183 42 0 0 chrX 66710807 66710831 -99939465 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 1093 298 341 65 30 chrX 66710860 66711029 -99939267 + HAL1 LINE L1 180 354 -2153 2 1093 324 289 158 33 chrX 66711257 66711586 -99938710 + HAL1 LINE L1 1428 1797 -710 2 1093 326 309 40 0 chrX 66711935 66712061 -99938235 + HAL1 LINE L1 2247 2377 -130 2 1093 672 177 16 31 chrX 66714599 66714791 -99935505 + Lx9 LINE L1 7456 7644 0 2 1093 509 0 16 0 chrX 66715296 66715357 -99934939 + (GA)n Simple_repeat Simple_repeat 1 62 0 2 1094 1041 49 7 0 chrX 66717390 66717532 -99932764 + L1_Mus1 LINE L1 6425 6567 0 2 1094 40679 11 1 6 chrX 66717586 66723765 -99926531 - L1Md_A LINE L1 0 6582 443 2 1094 424 354 106 58 chrX 66724055 66724553 -99925743 - L2a LINE L2 -220 3206 2683 2 1094 291 296 103 72 chrX 66725010 66725127 -99925169 - L1MC4 LINE L1 -4530 1685 1580 2 1094 1051 57 25 0 chrX 66725127 66725285 -99925011 - L1_Mus3 LINE L1 -3 6635 6474 2 1094 291 296 103 72 chrX 66725285 66725429 -99924867 - L1MC4 LINE L1 -4636 1579 1416 2 1094 491 317 32 16 chrX 66725575 66725764 -99924532 - L1MC4 LINE L1 -5038 1177 986 2 1094 420 183 108 18 chrX 66725811 66725978 -99924318 + Lx9 LINE L1 7421 7602 -42 2 1094 1044 207 10 20 chrX 66725987 66726184 -99924112 - B3 SINE B2 -20 196 2 2 1094 704 294 14 8 chrX 66726257 66726454 -99923842 + B3A SINE B2 10 206 -10 2 1094 5057 236 46 25 chrX 66726600 66727780 -99922516 - Lx5 LINE L1 0 7050 5847 2 1094 496 183 0 103 chrX 66727780 66727896 -99922400 + L1_Mur2 LINE L1 5376 5479 -398 2 1094 1135 83 0 0 chrX 66727899 66728044 -99922252 + B1_Mus1 SINE Alu 2 146 -2 2 1094 1451 244 73 22 chrX 66728075 66728152 -99922144 + L1_Mur2 LINE L1 5472 5549 -625 2 1094 3107 71 10 0 chrX 66728152 66728548 -99921748 - MTB LTR MaLR 0 400 1 2 1094 1451 218 69 18 chrX 66728548 66728836 -99921460 + L1_Mur2 LINE L1 5512 5820 -57 2 1094 413 327 110 30 chrX 66728856 66729285 -99921011 + L1M5 LINE L1 2702 3164 -2982 3 1094 180 0 0 0 chrX 66729546 66729566 -99920730 + (CA)n Simple_repeat Simple_repeat 2 21 0 3 1094 294 132 0 0 chrX 66729563 66729616 -99920680 + (CCA)n Simple_repeat Simple_repeat 1 53 0 3 1094 228 111 0 0 chrX 66729614 66729650 -99920646 + (CAG)n Simple_repeat Simple_repeat 1 36 0 3 1094 412 218 22 43 chrX 66729728 66729867 -99920429 + L1MC4a LINE L1 6458 6593 -1289 3 1094 424 238 86 18 chrX 66729966 66730129 -99920167 + L1MC4a LINE L1 7126 7299 -583 3 1094 277 122 0 0 chrX 66731284 66731333 -99918963 + Lx8 LINE L1 7420 7468 -5 3 1094 450 0 0 0 chrX 66731958 66732008 -99918288 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1094 461 259 121 34 chrX 66734488 66734811 -99915485 - MLT1D LTR MaLR 0 505 119 3 1094 396 0 0 0 chrX 66734862 66734906 -99915390 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 1094 261 0 0 0 chrX 66736420 66736449 -99913847 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 1094 681 13 0 0 chrX 66737540 66737618 -99912678 + (TC)n Simple_repeat Simple_repeat 1 78 0 3 1094 198 0 0 0 chrX 66737714 66737736 -99912560 + (CG)n Simple_repeat Simple_repeat 1 22 0 3 1094 297 0 0 0 chrX 66737736 66737768 -99912528 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1094 1165 77 7 0 chrX 66737772 66737927 -99912369 + B2_Mm2 SINE B2 28 183 -12 3 1094 246 282 0 53 chrX 66738628 66738703 -99911593 + polypyrimidine Low_complexity Low_complexity 1 71 0 3 1094 249 108 0 0 chrX 66739885 66739922 -99910374 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 1094 1285 246 50 7 chrX 66740012 66740291 -99910005 + MTC LTR MaLR 129 419 -2 3 1094 527 291 38 44 chrX 66743259 66743417 -99906879 - MLT1C LTR MaLR 0 467 311 3 1094 4108 49 10 2 chrX 66743435 66743945 -99906351 - L1Md_F2 LINE L1 0 6582 6069 3 1094 5606 56 2 0 chrX 66743945 66744858 -99905438 + L1Md_F2 LINE L1 5179 6092 -490 3 1094 309 341 84 49 chrX 66744933 66745158 -99905138 - MLT1C LTR MaLR -272 233 1 3 1094 314 45 409 23 chrX 66745534 66745622 -99904674 - B2_Mm2 SINE B2 -7 188 67 3 1094 1249 103 11 0 chrX 66745639 66745814 -99904482 - B2_Mm1t SINE B2 -14 179 3 3 1094 401 342 12 30 chrX 66746623 66746789 -99903507 + RSINE1 SINE B4 3 165 0 3 1094 2961 83 2 10 chrX 66746887 66747286 -99903010 - MTA_Mm LTR MaLR 0 396 1 3 1094 282 116 0 0 chrX 66748142 66748185 -99902111 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1094 4403 57 4 2 chrX 66748511 66749061 -99901235 - L1_Mus3 LINE L1 -12 6626 6076 3 1094 1124 136 11 0 chrX 66749958 66750135 -99900161 + B2_Mm2 SINE B2 1 179 -16 3 1094 1005 108 68 0 chrX 66750171 66750347 -99899949 - Lx LINE L1 0 6654 6467 3 1094 1859 131 0 0 chrX 66750366 66750664 -99899632 - MusHAL1 LINE L1 -2119 593 296 3 1094 1174 134 50 14 chrX 66750664 66750988 -99899308 + LTRIS5 LTR ERV1 1 447 0 3 1094 458 80 120 0 chrX 66750988 66751063 -99899233 - MusHAL1 LINE L1 -2413 299 216 3 1094 5028 153 12 11 chrX 66751062 66751965 -99898331 + L1_Mur2 LINE L1 3409 4312 -1565 3 1094 3509 149 29 0 chrX 66751967 66752556 -99897740 - Lx2B LINE L1 -512 6488 5883 3 1094 1275 97 0 0 chrX 66752553 66752728 -99897568 - Lx2A1 LINE L1 -1247 5761 5587 3 1094 28 48 0 0 chrX 66753122 66753164 -99897132 + AT_rich Low_complexity Low_complexity 1 42 0 3 1094 678 289 0 59 chrX 66753630 66753799 -99896497 - RSINE1 SINE B4 0 165 7 3 1094 218 200 44 0 chrX 66753822 66753867 -99896429 - MIRc SINE MIR -133 135 89 3 1094 633 86 51 8 chrX 66754403 66754520 -99895776 + L1Md_F2 LINE L1 6458 6579 -3 3 1094 409 323 68 3 chrX 66755789 66755943 -99894353 + MIR3 SINE MIR 25 176 -32 3 1094 639 369 75 44 chrX 66756840 66757322 -99892974 + MLT1D LTR MaLR 9 505 0 3 1094 2594 48 0 0 chrX 66759363 66759678 -99890618 - L1Md_F2 LINE L1 -140 6442 6128 3 1094 824 50 17 0 chrX 66759678 66759797 -99890499 + L1Md_F2 LINE L1 6448 6568 -14 3 1094 1918 35 0 0 chrX 66759960 66760187 -99890109 - L1Md_T LINE L1 -76 6506 6280 3 1094 192 346 0 0 chrX 66760573 66760625 -99889671 + MIR SINE MIR 99 150 -58 3 1094 208 300 73 62 chrX 66762509 66762697 -99887599 + L2b LINE L2 3223 3416 -10 3 1094 507 349 126 37 chrX 66763085 66763356 -99886940 - MLT1C LTR MaLR -2 465 171 3 1094 554 276 8 0 chrX 66763369 66763496 -99886800 - ID_B1 SINE B4 -3 221 94 3 1094 429 294 37 0 chrX 66763495 66763631 -99886665 - MLT1C LTR MaLR -283 184 44 3 1094 1348 73 78 0 chrX 66765581 66765837 -99884459 + L1_Mus1 LINE L1 6356 6567 0 3 1094 1004 151 6 0 chrX 66765849 66766028 -99884268 + GA-rich Low_complexity Low_complexity 1 180 0 3 1094 4122 222 26 7 chrX 66767618 66768474 -99881822 - Lx7 LINE L1 -510 7186 6315 3 1094 1254 167 43 4 chrX 66768625 66768860 -99881436 + Lx4A LINE L1 6811 7054 -4 3 1094 388 346 72 20 chrX 66768954 66769299 -99880997 + L1MB8 LINE L1 5804 6166 -12 3 1094 26 50 0 0 chrX 66769670 66769710 -99880586 + AT_rich Low_complexity Low_complexity 1 40 0 3 1094 387 313 96 24 chrX 66770066 66770233 -99880063 + MIR3 SINE MIR 7 185 -23 3 1094 468 0 0 0 chrX 66770637 66770689 -99879607 + (GA)n Simple_repeat Simple_repeat 2 53 0 3 1094 1015 203 36 9 chrX 66772608 66772827 -99877469 - URR1A DNA MER1_type -1 225 1 3 1094 304 300 12 0 chrX 66772980 66773060 -99877236 - Lx8 LINE L1 -842 6631 6551 3 1094 456 132 11 32 chrX 66773143 66773237 -99877059 + Lx3A LINE L1 6870 6961 -20 3 1094 994 127 7 0 chrX 66773242 66773512 -99876784 + (GAAA)n Simple_repeat Simple_repeat 1 271 0 3 1094 354 91 0 0 chrX 66773540 66773595 -99876701 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 1094 626 121 0 13 chrX 66773595 66773726 -99876570 - RLTR31A_Mm LTR ERVK -195 366 199 3 1094 1075 66 15 0 chrX 66773771 66773907 -99876389 - B1_Mus2 SINE Alu -9 138 1 3 1094 6856 112 35 12 chrX 66774160 66775203 -99875093 - Lx LINE L1 -1 6653 5588 3 1094 567 0 0 0 chrX 66775336 66775399 -99874897 + (TTTC)n Simple_repeat Simple_repeat 4 66 0 3 1094 4532 117 15 3 chrX 66775401 66776079 -99874217 - L1_Mus4 LINE L1 -14 6622 5937 3 1094 249 182 0 0 chrX 66777831 66777886 -99872410 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 1094 202 284 165 52 chrX 66777888 66778003 -99872293 - L2a LINE L2 -5 3421 3294 3 1094 185 266 233 52 chrX 66778255 66778465 -99871831 - L2a LINE L2 -937 2482 2235 3 1094 1110 72 0 0 chrX 66778514 66778652 -99871644 + B1_Mm SINE Alu 1 138 -9 3 1094 315 0 0 0 chrX 66778652 66778687 -99871609 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1094 720 120 0 0 chrX 66779471 66779579 -99870717 - BC1_Mm scRNA scRNA -43 109 2 3 1094 221 256 13 13 chrX 66779696 66779775 -99870521 + T-rich Low_complexity Low_complexity 2 80 0 3 1094 1255 185 15 19 chrX 66779790 66780049 -99870247 - Lx5 LINE L1 0 7050 6793 3 1094 4373 94 10 93 chrX 66780049 66780868 -99869428 - RMER17A LTR ERVK 0 751 1 3 1094 2095 194 101 11 chrX 66780868 66781456 -99868840 - Lx5 LINE L1 -237 6821 6117 3 1094 22 0 0 0 chrX 66781459 66781481 -99868815 + AT_rich Low_complexity Low_complexity 1 22 0 3 1094 17993 80 22 8 chrX 66781481 66784485 -99865811 - L1VL4 LINE L1 -147 3412 212 3 1094 753 199 0 14 chrX 66784497 66784640 -99865656 - B1_Mus1 SINE Alu -7 141 1 3 1094 2579 272 69 28 chrX 66784754 66785612 -99864684 - Lx7 LINE L1 -201 7495 6603 3 1094 212 184 0 0 chrX 66785641 66785679 -99864617 + (TTA)n Simple_repeat Simple_repeat 2 39 0 3 1094 243 167 0 20 chrX 66785700 66785749 -99864547 - MIR SINE MIR -125 137 90 3 1094 6216 127 35 5 chrX 66786961 66788355 -99861941 + L1Md_F LINE L1 148 1589 -4294 3 1094 3194 94 3 0 chrX 66788354 66788923 -99861373 - L1VL1 LINE L1 -4205 1678 1108 3 1094 2423 68 0 0 chrX 66788932 66789258 -99861038 + L1Md_F LINE L1 3069 3394 -2489 3 1094 11849 86 31 2 chrX 66789257 66790918 -99859378 + L1Md_F LINE L1 3879 5614 -698 3 1094 7511 79 1 2 chrX 66790918 66791903 -99858393 + L1Md_F2 LINE L1 5587 6570 -12 3 1094 1106 238 28 42 chrX 66791903 66791943 -99858353 + L1Md_F LINE L1 5615 5648 -664 3 1094 209 128 26 0 chrX 66794524 66794563 -99855733 + T-rich Low_complexity Low_complexity 3 42 0 3 1094 5313 220 74 43 chrX 66794577 66796357 -99853939 - Lx7 LINE L1 -529 7167 5287 3 1094 360 0 0 0 chrX 66796357 66796397 -99853899 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 3 1094 4943 176 57 108 chrX 66796397 66796764 -99853532 - Lx7 LINE L1 -594 5286 5018 3 1094 935 94 47 7 chrX 66796764 66796914 -99853382 - L1_Mus2 LINE L1 0 6566 6411 3 1094 4943 176 57 108 chrX 66796914 66797281 -99853015 - Lx7 LINE L1 -863 5017 4626 3 1094 408 40 0 0 chrX 66797281 66797331 -99852965 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1094 4943 176 57 108 chrX 66797331 66797387 -99852909 - Lx7 LINE L1 -1255 4625 4573 3 1094 418 292 53 8 chrX 66798767 66798898 -99851398 - ID_B1 SINE B4 -1 223 87 3 1094 396 40 0 0 chrX 66801191 66801241 -99849055 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1094 5603 48 7 1 chrX 66801741 66802437 -99847859 - L1_Mus1 LINE L1 -1 6566 5867 3 1094 504 48 0 0 chrX 66803747 66803810 -99846486 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 1094 180 0 0 0 chrX 66803810 66803830 -99846466 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 1094 368 184 98 14 chrX 66803863 66804006 -99846290 + Lx9 LINE L1 7477 7631 -13 3 1094 8006 60 2 0 chrX 66805508 66806698 -99843598 - L1_Mus1 LINE L1 0 6567 5372 3 1094 197 324 37 21 chrX 66806760 66806935 -99843361 - MIRb SINE MIR -63 205 20 3 1094 24 0 0 0 chrX 66807497 66807521 -99842775 + AT_rich Low_complexity Low_complexity 1 24 0 3 1094 195 250 0 0 chrX 66808028 66808080 -99842216 + T-rich Low_complexity Low_complexity 1 52 0 3 1094 260 254 36 0 chrX 66808488 66808543 -99841753 - MIRm SINE MIR 0 276 220 3 1094 191 378 61 0 chrX 66809006 66809088 -99841208 - L2 LINE L2 -648 2771 2685 3 1094 332 333 86 17 chrX 66810814 66810988 -99839308 + MIR SINE MIR 20 205 -57 3 1094 3118 3 0 0 chrX 66810992 66811340 -99838956 + L1Md_A LINE L1 6235 6582 0 3 1094 411 56 0 0 chrX 66812027 66812081 -99838215 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1094 227 254 0 8 chrX 66812083 66812206 -99838090 + GA-rich Low_complexity Low_complexity 1 122 0 3 1094 1162 69 0 0 chrX 66812816 66812960 -99837336 + B1_Mus1 SINE Alu 5 148 0 4 1094 461 127 13 0 chrX 66812960 66813039 -99837257 + (GAAAA)n Simple_repeat Simple_repeat 3 82 0 4 1094 231 302 111 19 chrX 66814490 66814652 -99835644 + MIR SINE MIR 22 198 -64 4 1094 234 266 45 30 chrX 66815204 66815217 -99835079 + PB1D10 SINE Alu 49 81 -36 4 1094 238 214 24 0 chrX 66815217 66815259 -99835037 + ID_B1 SINE B4 171 213 -11 4 1094 234 266 45 30 chrX 66815259 66815270 -99835026 + PB1D10 SINE Alu 82 115 -2 4 1094 682 298 0 0 chrX 66817759 66817920 -99832376 + RSINE1 SINE B4 5 165 0 4 1094 1919 175 12 3 chrX 66818084 66818427 -99831869 + Lx2B LINE L1 6655 7000 0 4 1094 324 0 0 0 chrX 66818765 66818801 -99831495 + (TC)n Simple_repeat Simple_repeat 1 36 0 4 1094 423 38 0 0 chrX 66818801 66818853 -99831443 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1094 248 363 7 43 chrX 66820315 66820456 -99829840 + L2a LINE L2 3273 3408 -18 4 1094 264 246 0 28 chrX 66821247 66821318 -99828978 + CT-rich Low_complexity Low_complexity 5 73 0 4 1094 183 42 0 0 chrX 66821326 66821350 -99828946 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 1094 476 120 0 74 chrX 66821946 66822054 -99828242 - L1_Mus3 LINE L1 -8 6630 6531 4 1094 1057 295 58 27 chrX 66822234 66822430 -99827866 - MLT1B LTR MaLR 0 390 196 4 1094 523 268 130 10 chrX 66822430 66822622 -99827674 - B3 SINE B2 0 216 2 4 1094 1057 295 58 27 chrX 66822622 66822801 -99827495 - MLT1B LTR MaLR -195 195 3 4 1094 659 289 20 70 chrX 66823393 66823594 -99826702 - B3A SINE B2 -7 191 1 4 1094 307 376 9 0 chrX 66824064 66824173 -99826123 - MER117 DNA MER1_type -57 140 31 4 1094 261 0 0 0 chrX 66824275 66824304 -99825992 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 1094 36295 56 1 25 chrX 66826083 66831768 -99818528 + L1Md_T LINE L1 99 5586 -297 4 1094 7932 59 0 0 chrX 66831768 66832764 -99817532 + L1Md_T LINE L1 5587 6582 0 4 1094 231 36 0 0 chrX 66832776 66832804 -99817492 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1094 231 36 0 0 chrX 66832867 66832895 -99817401 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1094 1055 60 15 0 chrX 66833752 66833886 -99816410 + B1_Mm SINE Alu 3 138 -9 4 1094 620 95 0 0 chrX 66834013 66834097 -99816199 - BC1_Mm scRNA scRNA -68 84 1 4 1094 528 332 84 50 chrX 66834258 66834496 -99815800 - MLT1D LTR MaLR -259 246 1 4 1094 271 335 32 75 chrX 66834609 66834796 -99815500 + Tigger13a DNA MER2_type 372 550 -221 4 1094 1170 68 0 7 chrX 66836387 66836536 -99813760 - B1_Mus1 SINE Alu 0 148 1 4 1094 8196 158 17 22 chrX 66838485 66840950 -99809346 + Lx2 LINE L1 4538 6997 0 4 1094 483 118 0 0 chrX 66841061 66841146 -99809150 + (TG)n Simple_repeat Simple_repeat 2 86 0 4 1094 5285 49 3 3 chrX 66841468 66842125 -99808171 - L1Md_F2 LINE L1 -14 6568 5912 4 1094 476 85 0 12 chrX 66843255 66843338 -99806958 + L1Md_F3 LINE L1 6502 6583 -1 4 1094 227 242 0 0 chrX 66843797 66843863 -99806433 + (TCTCTG)n Simple_repeat Simple_repeat 6 71 0 4 1094 301 172 17 33 chrX 66844182 66844242 -99806054 + B1_Mur4 SINE Alu 2 60 -90 4 1094 354 0 0 161 chrX 66844243 66844429 -99805867 + (CAGAG)n Simple_repeat Simple_repeat 5 160 0 4 1094 552 142 29 29 chrX 66844432 66844534 -99805762 + B1_Mur3 SINE Alu 42 143 -6 4 1094 551 126 11 0 chrX 66844534 66844629 -99805667 + (GA)n Simple_repeat Simple_repeat 1 96 0 4 1094 742 170 70 14 chrX 66845307 66845450 -99804846 - Lx2 LINE L1 -433 6564 6414 4 1094 2307 158 44 49 chrX 66845442 66845895 -99804401 + Lx2B LINE L1 6545 6995 -5 4 1094 1472 73 34 0 chrX 66846147 66846353 -99803943 - Lx LINE L1 -587 6067 5855 4 1094 1000 208 22 50 chrX 66846366 66846685 -99803611 - RMER17C LTR ERVK -21 389 80 4 136 659 194 86 25 chrX 66846656 66846899 -99803397 - RMER17C LTR ERVK -527 431 174 4 1095 2698 117 3 0 chrX 66846902 66847294 -99803002 - L1_Mm LINE L1 -34 5849 5457 4 1095 3530 94 76 2 chrX 66847294 66847807 -99802489 + Lx LINE L1 6095 6645 -9 4 1095 635 275 71 25 chrX 66848628 66848826 -99801470 + B3 SINE B2 5 211 -5 4 1095 3971 50 6 6 chrX 66849094 66849596 -99800700 - L1Md_F3 LINE L1 -14 6570 6069 4 1095 870 211 63 0 chrX 66849639 66849829 -99800467 - B3 SINE B2 -6 210 9 4 1095 37 39 0 0 chrX 66850132 66850183 -99800113 + AT_rich Low_complexity Low_complexity 1 51 0 4 1095 389 246 36 0 chrX 66850244 66850354 -99799942 - L1MB4 LINE L1 -35 6145 6032 4 1095 22 0 0 0 chrX 66850393 66850415 -99799881 + AT_rich Low_complexity Low_complexity 1 22 0 4 1095 180 287 103 17 chrX 66852340 66852457 -99797839 - L2a LINE L2 -62 3364 3238 4 1095 22 0 0 0 chrX 66852985 66853007 -99797289 + AT_rich Low_complexity Low_complexity 1 22 0 4 1095 645 14 0 0 chrX 66854339 66854413 -99795883 + (CA)n Simple_repeat Simple_repeat 2 75 0 4 1095 439 103 12 25 chrX 66854443 66854523 -99795773 + (AGGGGG)n Simple_repeat Simple_repeat 5 83 0 4 1095 26 0 0 0 chrX 66855166 66855192 -99795104 + AT_rich Low_complexity Low_complexity 1 26 0 4 1095 257 176 0 0 chrX 66855217 66855268 -99795028 + Lx2B LINE L1 6633 6683 -317 4 1095 228 35 0 0 chrX 66855370 66855399 -99794897 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 4 1095 309 313 87 32 chrX 66856099 66856284 -99794012 - L2a LINE L2 -8 3418 3224 4 1095 340 297 79 19 chrX 66856284 66856617 -99793679 + L1MB5 LINE L1 5581 5994 -180 4 1095 272 206 65 52 chrX 66856708 66856785 -99793511 + ORR1E LTR MaLR 271 348 -11 4 1095 373 73 0 0 chrX 66856806 66856861 -99793435 + L1_Mus3 LINE L1 6572 6626 -12 4 1095 447 19 0 0 chrX 66856861 66856913 -99793383 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 1095 3308 150 5 9 chrX 66856953 66857512 -99792784 + L1_Mur2 LINE L1 5254 5810 -67 4 1095 227 320 50 10 chrX 66857659 66857760 -99792536 + PB1D9 SINE Alu 6 110 -10 4 1095 180 0 0 0 chrX 66859499 66859519 -99790777 + (TC)n Simple_repeat Simple_repeat 1 20 0 4 1095 441 0 0 0 chrX 66859519 66859567 -99790729 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1095 25 0 0 0 chrX 66859769 66859794 -99790502 + AT_rich Low_complexity Low_complexity 1 25 0 4 1095 330 26 0 0 chrX 66860154 66860193 -99790103 + (TC)n Simple_repeat Simple_repeat 1 39 0 4 1095 383 316 98 44 chrX 66860372 66860597 -99789699 + MIRb SINE MIR 26 262 -6 4 1095 589 309 105 45 chrX 66860820 66861152 -99789144 - MLT1C LTR MaLR -8 459 108 4 1095 590 355 0 0 chrX 66862831 66862986 -99787310 - RSINE1 SINE B4 -8 157 3 4 1095 21 57 0 0 chrX 66863051 66863086 -99787210 + AT_rich Low_complexity Low_complexity 1 35 0 4 1095 296 293 81 16 chrX 66863131 66863360 -99786936 - L1MA4 LINE L1 -281 6019 5774 4 1095 845 284 34 141 chrX 66865925 66866307 -99783989 + MTEb LTR MaLR 1 341 -38 4 1095 3843 304 107 17 chrX 66866332 66866589 -99783707 + MTE-int LTR MaLR 1 287 -1293 4 1095 378 0 0 0 chrX 66866589 66866631 -99783665 + (TAA)n Simple_repeat Simple_repeat 2 43 0 4 1095 3843 304 107 17 chrX 66866631 66867666 -99782630 + MTE-int LTR MaLR 288 1408 -172 4 1095 25 0 0 0 chrX 66867691 66867716 -99782580 + AT_rich Low_complexity Low_complexity 1 25 0 4 1095 5465 100 48 5 chrX 66867720 66868526 -99781770 - Lx3_Mus LINE L1 -21 6988 6148 4 1095 662 286 6 6 chrX 66868547 66868709 -99781587 + MTE-int LTR MaLR 1417 1578 -2 4 1095 822 299 45 52 chrX 66868836 66869122 -99781174 + MTEa LTR MaLR 96 379 0 4 1095 792 70 17 9 chrX 66872664 66872780 -99777516 + B1_Mm SINE Alu 31 147 0 4 1095 468 116 0 0 chrX 66872780 66872866 -99777430 + (CAAAA)n Simple_repeat Simple_repeat 1 86 0 4 1095 6234 88 12 77 chrX 66872992 66874023 -99776273 + MTB-int LTR MaLR 135 1098 0 4 1095 2779 91 10 20 chrX 66874023 66874427 -99775869 + MTB LTR MaLR 1 400 0 4 1095 203 349 163 7 chrX 66876156 66876309 -99773987 + L2c LINE L2 3098 3274 -113 4 1095 21 0 0 0 chrX 66877425 66877446 -99772850 + AT_rich Low_complexity Low_complexity 1 21 0 4 1095 261 0 0 0 chrX 66878376 66878405 -99771891 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1095 380 345 44 11 chrX 66879328 66879510 -99770786 + MIRb SINE MIR 73 260 -8 4 1095 441 36 0 0 chrX 66879902 66879957 -99770339 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1095 6127 59 18 2 chrX 66880390 66881176 -99769120 - L1Md_F2 LINE L1 0 6582 5785 4 1095 214 274 106 106 chrX 66881176 66881270 -99769026 + RSINE1 SINE B4 39 132 -33 4 1095 686 53 0 10 chrX 66881290 66881386 -99768910 + (TC)n Simple_repeat Simple_repeat 2 96 0 4 1095 321 82 0 0 chrX 66881386 66881434 -99768862 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1095 489 316 72 43 chrX 66881514 66881861 -99768435 - MLT1A0 LTR MaLR -4 361 5 4 1095 37949 29 1 0 chrX 66882741 66889593 -99760703 - L1Md_T LINE L1 0 6585 1 4 1095 436 317 142 69 chrX 66892244 66892590 -99757706 - MTD LTR MaLR -16 403 16 4 1095 4412 97 2 8 chrX 66892882 66893515 -99756781 - L1_Mus4 LINE L1 -3 6633 6005 4 1095 5802 142 9 8 chrX 66893516 66893638 -99756658 + L1_Mus4 LINE L1 4937 5058 -825 4 1095 3599 122 126 28 chrX 66893638 66894322 -99755974 - RMER17A LTR ERVK 0 751 1 4 1095 5802 106 15 12 chrX 66894322 66895270 -99755026 + L1_Mus4 LINE L1 5059 6001 -635 4 1095 708 74 0 0 chrX 66895285 66895380 -99754916 + (TTC)n Simple_repeat Simple_repeat 3 97 0 4 1095 1455 39 0 0 chrX 66895380 66895558 -99754738 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 4 1095 186 43 0 0 chrX 66895561 66895584 -99754712 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1095 236 297 37 56 chrX 66895754 66895861 -99754435 + MIRb SINE MIR 86 190 -78 4 1095 323 362 28 11 chrX 66896534 66896710 -99753586 + MER58A DNA MER1_type 46 224 0 4 1095 270 0 0 0 chrX 66897877 66897907 -99752389 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1095 360 0 0 0 chrX 66902029 66902069 -99748227 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 1095 3018 151 148 7 chrX 66902947 66903553 -99746743 + Lx2B LINE L1 6028 6719 -281 5 1095 237 207 0 54 chrX 66903563 66903655 -99746641 + (TAAA)n Simple_repeat Simple_repeat 1 87 0 5 1095 1901 41 8 12 chrX 66904227 66904474 -99745822 - L1Md_F2 LINE L1 0 6582 6337 5 1095 219 188 0 0 chrX 66904818 66904866 -99745430 + T-rich Low_complexity Low_complexity 1 48 0 5 1095 189 0 0 0 chrX 66906241 66906262 -99744034 + (CCA)n Simple_repeat Simple_repeat 2 22 0 5 1095 403 290 79 1 chrX 66906699 66906801 -99743495 + MTEa LTR MaLR 10 119 -260 5 1095 2728 194 36 35 chrX 66906801 66907377 -99742919 + RMER4B LTR ERVK 1 577 -8 5 1095 437 289 119 6 chrX 66907385 66907545 -99742751 + MTEa LTR MaLR 136 313 -66 5 1095 4131 109 5 0 chrX 66907548 66908137 -99742159 - Lx LINE L1 -190 6464 5873 5 1095 239 274 0 0 chrX 66908146 66908208 -99742088 + MTEa LTR MaLR 318 379 0 5 1095 306 319 44 0 chrX 66908832 66908923 -99741373 + MER68 LTR ERVL 1 95 -468 5 1095 238 352 19 9 chrX 66909010 66909116 -99741180 + MER68 LTR ERVL 441 547 -16 5 1095 2165 51 0 0 chrX 66909894 66910167 -99740129 + L1Md_A LINE L1 6310 6582 0 5 1095 5928 58 9 18 chrX 66910894 66911677 -99738619 + L1_Mus2 LINE L1 5790 6565 -1 5 1095 341 250 75 0 chrX 66912157 66912237 -99738059 - B3A SINE B2 -107 91 6 5 1095 392 256 150 16 chrX 66912803 66912930 -99737366 - B1F2 SINE Alu -3 146 3 5 1095 1667 208 30 10 chrX 66913460 66913892 -99736404 - Lx2B LINE L1 -5 6992 6525 5 1095 477 0 0 0 chrX 66914028 66914081 -99736215 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 1095 342 0 0 0 chrX 66914081 66914118 -99736178 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1095 254 292 109 36 chrX 66917183 66917293 -99733003 - Charlie4z DNA MER1_type -34 133 16 5 1095 663 209 7 48 chrX 66917364 66917510 -99732786 - B1_Mur1 SINE Alu 0 149 10 5 1095 22 0 0 0 chrX 66917725 66917747 -99732549 + AT_rich Low_complexity Low_complexity 1 22 0 5 1095 378 0 0 0 chrX 66917996 66918038 -99732258 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 1095 721 276 41 111 chrX 66918122 66918464 -99731832 - MLT1B LTR MaLR -42 348 31 5 1095 216 262 89 45 chrX 66920632 66920744 -99729552 + PB1D7 SINE Alu 1 117 -3 5 1095 210 143 0 0 chrX 66920796 66920831 -99729465 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1095 969 227 45 5 chrX 66920938 66921137 -99729159 - B3 SINE B2 -9 207 1 5 1095 1099 119 0 49 chrX 66921196 66921222 -99729074 - B2_Mm2 SINE B2 -14 181 162 5 1095 261 0 0 0 chrX 66921222 66921251 -99729045 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 5 1095 1099 119 0 49 chrX 66921251 66921409 -99728887 - B2_Mm2 SINE B2 -34 161 6 5 1095 29032 83 58 17 chrX 66921814 66926779 -99723517 + L1Md_F2 LINE L1 418 5585 -298 5 1095 7410 68 6 21 chrX 66926780 66927790 -99722506 + L1Md_F2 LINE L1 5587 6581 -1 5 1095 324 333 104 9 chrX 66927969 66928084 -99722212 + RSINE1 SINE B4 4 129 -36 5 1095 450 0 0 0 chrX 66928098 66928148 -99722148 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1095 263 300 79 10 chrX 66928670 66928771 -99721525 + MIRb SINE MIR 93 200 -68 5 1095 465 316 106 47 chrX 66928778 66929117 -99721179 - RLTR9A LTR ERVK -2 366 8 5 1095 1278 284 41 12 chrX 66929484 66929829 -99720467 + ORR1E LTR MaLR 3 357 -2 5 1095 463 185 12 0 chrX 66930470 66930551 -99719745 + B3A SINE B2 34 115 -83 5 1095 414 0 0 0 chrX 66930743 66930789 -99719507 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1095 195 296 26 126 chrX 66930844 66930995 -99719301 + MIR SINE MIR 66 201 -61 5 1095 1313 284 3 6 chrX 66933413 66933749 -99716547 - Lx8 LINE L1 -363 7110 6776 5 1095 238 302 36 52 chrX 66933746 66933938 -99716358 + L1M2 LINE L1 2423 2611 -4238 5 1095 3372 143 97 9 chrX 66933960 66934540 -99715756 - Lx2B LINE L1 -24 6976 6346 5 1095 23 0 0 0 chrX 66934550 66934573 -99715723 + AT_rich Low_complexity Low_complexity 1 23 0 5 1095 2400 127 117 0 chrX 66934575 66934993 -99715303 - Lx3B LINE L1 -2 6971 6505 5 1095 689 237 26 21 chrX 66935053 66935243 -99715053 + Lx6 LINE L1 7269 7459 -1 5 1095 297 155 0 0 chrX 66935244 66935302 -99714994 + GA-rich Low_complexity Low_complexity 1 58 0 5 1095 467 308 112 41 chrX 66935374 66936218 -99714078 + L1M2 LINE L1 2738 3670 -3175 5 1095 287 161 98 18 chrX 66936218 66936382 -99713914 + (TA)n Simple_repeat Simple_repeat 1 177 0 5 1095 539 217 63 109 chrX 66938023 66938091 -99712205 + Lx9 LINE L1 7353 7406 -238 5 1095 6659 132 30 18 chrX 66938091 66939205 -99711091 + Lx2B LINE L1 5868 6994 -6 5 1095 539 217 63 109 chrX 66939205 66939374 -99710922 + Lx9 LINE L1 7407 7579 -65 5 1095 24 91 0 0 chrX 66939374 66939440 -99710856 + AT_rich Low_complexity Low_complexity 1 66 0 5 1095 201 162 0 26 chrX 66939466 66939504 -99710792 + CT-rich Low_complexity Low_complexity 2 38 0 5 1095 1111 50 0 0 chrX 66939778 66939918 -99710378 - L1_Mus1 LINE L1 -4 6563 6424 5 1095 285 109 0 0 chrX 66939999 66940045 -99710251 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1095 264 357 96 34 chrX 66940552 66940729 -99709567 - MIRb SINE MIR -44 224 37 5 1095 929 78 0 0 chrX 66940762 66940914 -99709382 + L1_Mus1 LINE L1 6434 6567 0 5 1095 387 143 48 58 chrX 66941176 66941280 -99709016 - Lx9 LINE L1 -8 7636 7534 5 1095 342 0 0 0 chrX 66941398 66941436 -99708860 + (TTG)n Simple_repeat Simple_repeat 2 39 0 5 1095 264 91 0 0 chrX 66942062 66942106 -99708190 + (A)n Simple_repeat Simple_repeat 1 44 0 5 1095 1533 43 16 0 chrX 66944002 66944188 -99706108 + B2_Mm1a SINE B2 3 191 -2 5 1095 379 330 11 0 chrX 66945194 66945285 -99705011 + B3 SINE B2 89 180 -36 5 1095 227 282 14 0 chrX 66945569 66945640 -99704656 - BLACKJACK DNA AcHobo -1 2943 2872 5 1095 304 255 169 7 chrX 66946514 66946656 -99703640 + Lx6 LINE L1 7248 7412 -48 5 1095 333 0 0 0 chrX 66946661 66946698 -99703598 + (TTA)n Simple_repeat Simple_repeat 1 37 0 5 1095 21 0 0 0 chrX 66946700 66946721 -99703575 + AT_rich Low_complexity Low_complexity 1 21 0 5 1095 21 36 0 0 chrX 66947089 66947117 -99703179 + AT_rich Low_complexity Low_complexity 1 28 0 5 1095 251 295 21 71 chrX 66947661 66947795 -99702501 + MIRc SINE MIR 7 145 -123 5 1095 22 0 0 0 chrX 66949938 66949960 -99700336 + AT_rich Low_complexity Low_complexity 1 22 0 5 1095 501 317 11 32 chrX 66952781 66952967 -99697329 - Lx8 LINE L1 -1026 6447 6266 5 1095 225 242 0 29 chrX 66952964 66953019 -99697277 + Lx9 LINE L1 7405 7459 -185 5 1095 576 42 0 0 chrX 66953019 66953090 -99697206 + (TG)n Simple_repeat Simple_repeat 2 72 0 5 1095 399 83 0 0 chrX 66953090 66953149 -99697147 + (CATA)n Simple_repeat Simple_repeat 3 62 0 5 1095 225 242 0 29 chrX 66953149 66953160 -99697136 + Lx9 LINE L1 7460 7469 -175 5 1095 2003 215 58 14 chrX 66953209 66953639 -99696657 - MT2A LTR ERVL -82 451 3 5 1095 195 42 0 0 chrX 66953648 66953672 -99696624 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 1095 5057 189 76 19 chrX 66953753 66954790 -99695506 - Lx9 LINE L1 -206 7438 6343 5 1095 318 350 58 39 chrX 66955590 66955795 -99694501 - MIRb SINE MIR -28 240 32 5 1095 624 129 0 0 chrX 66956084 66956185 -99694111 + (TA)n Simple_repeat Simple_repeat 1 101 0 5 1095 415 326 100 19 chrX 66956185 66956726 -99693570 - L1MD LINE L1 -974 5172 4588 5 1095 582 242 8 0 chrX 66956765 66956889 -99693407 - Lx8 LINE L1 -391 7082 6958 5 1095 856 362 10 40 chrX 66957192 66957491 -99692805 - B4A SINE B4 0 292 3 5 1095 975 98 12 6 chrX 66958474 66958638 -99691658 + (GAAA)n Simple_repeat Simple_repeat 2 166 0 5 1095 281 200 102 34 chrX 66960808 66960896 -99689400 + MT2B LTR ERVL 164 257 -344 5 1095 654 149 17 50 chrX 66960826 66960946 -99689350 + B1_Mus2 SINE Alu 32 147 0 5 1095 316 64 0 0 chrX 66961636 66961683 -99688613 + L1_Mus2 LINE L1 6520 6566 0 5 1095 4716 134 43 41 chrX 66961807 66962706 -99687590 + RMER17A2 LTR ERVK 1 901 -5 5 1095 447 19 0 0 chrX 66962725 66962777 -99687519 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 1095 221 154 0 37 chrX 66962892 66962946 -99687350 + CT-rich Low_complexity Low_complexity 2 53 0 5 1095 227 369 16 39 chrX 66962987 66963114 -99687182 - L3 LINE CR1 -124 4365 4242 5 1095 253 89 35 35 chrX 66963249 66963307 -99686989 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 5 1095 21 0 0 0 chrX 66963353 66963374 -99686922 + AT_rich Low_complexity Low_complexity 1 21 0 5 1095 284 326 57 14 chrX 66964326 66964466 -99685830 - RMER15 LTR ERVL -5 570 425 5 1095 251 270 32 0 chrX 66966483 66966546 -99683750 - MIR SINE MIR -61 147 83 5 1095 342 0 0 0 chrX 66966790 66966828 -99683468 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1095 522 46 0 0 chrX 66967852 66967917 -99682379 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 1095 495 0 0 0 chrX 66968678 66968733 -99681563 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 1095 544 337 28 41 chrX 66969020 66969311 -99680985 - MamRep434 DNA TcMar -116 310 24 5 1095 513 0 0 0 chrX 66969840 66969897 -99680399 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1095 291 288 60 81 chrX 66970273 66970458 -99679838 + L3 LINE CR1 4109 4289 -200 5 1095 468 0 0 0 chrX 66970506 66970558 -99679738 + (TC)n Simple_repeat Simple_repeat 2 53 0 5 1095 339 25 0 0 chrX 66970558 66970597 -99679699 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1095 655 148 0 0 chrX 66970728 66970843 -99679453 - Lx LINE L1 -7 6647 6533 5 1095 1115 83 0 27 chrX 66970999 66971222 -99679074 + (GAAA)n Simple_repeat Simple_repeat 1 217 0 5 1095 195 42 0 0 chrX 66971550 66971574 -99678722 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1095 4273 118 6 9 chrX 66971616 66972258 -99678038 - Lx3C LINE L1 -472 6504 5865 5 1095 4236 112 138 0 chrX 66972250 66972953 -99677343 + Lx3C LINE L1 5087 5886 0 5 1095 195 42 0 0 chrX 66973080 66973104 -99677192 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1095 216 0 0 0 chrX 66973127 66973151 -99677145 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 6 1095 7245 63 1 1 chrX 66973332 66974260 -99676036 + L1_Mus1 LINE L1 5634 6566 -1 6 1095 315 0 0 0 chrX 66974281 66974316 -99675980 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1095 341 0 45 0 chrX 66974592 66974636 -99675660 + (TTATA)n Simple_repeat Simple_repeat 2 47 0 6 1095 347 337 104 33 chrX 66975390 66975727 -99674569 - Tigger15a DNA TcMar -120 595 235 6 1095 1557 279 52 32 chrX 66976144 66976681 -99673615 - Lx8 LINE L1 -232 7241 6694 6 1095 1329 252 81 20 chrX 66977161 66977505 -99672791 - ORR1D2 LTR MaLR 0 370 6 6 1096 23 0 0 0 chrX 66978373 66978396 -99671900 + AT_rich Low_complexity Low_complexity 1 23 0 6 1096 475 280 204 47 chrX 66978749 66979067 -99671229 - MLT1A0 LTR MaLR -2 406 1 6 1096 180 0 0 0 chrX 66979942 66979962 -99670334 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 6 1096 180 0 0 0 chrX 66980628 66980648 -99669648 + (TTA)n Simple_repeat Simple_repeat 2 21 0 6 1096 6701 58 2 7 chrX 66980691 66981549 -99668747 + L1Md_F2 LINE L1 5727 6580 -2 6 1096 186 118 0 0 chrX 66982856 66982890 -99667406 + (CAA)n Simple_repeat Simple_repeat 2 35 0 6 1096 271 345 11 0 chrX 66983712 66983799 -99666497 + ID_B1 SINE B4 78 165 -59 6 1096 292 316 63 0 chrX 66983725 66983820 -99666476 + PB1D10 SINE Alu 10 110 -7 6 1096 213 39 0 0 chrX 66985161 66985187 -99665109 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 6 1096 202 314 151 10 chrX 66985337 66985486 -99664810 - MIRm SINE MIR -2 274 92 6 1096 1050 83 14 0 chrX 66986445 66986590 -99663706 + B1_Mus1 SINE Alu 2 148 0 6 1096 306 164 0 0 chrX 66986842 66986897 -99663399 + GA-rich Low_complexity Low_complexity 3 57 0 6 1096 833 125 14 0 chrX 66987345 66987489 -99662807 - L1_Mus3 LINE L1 -2 6636 6491 6 1096 289 309 10 10 chrX 66987996 66988094 -99662202 - MIRb SINE MIR -80 188 91 6 1096 1283 160 27 0 chrX 66989792 66990011 -99660285 - URR1B DNA MER1_type 0 225 1 6 1096 22 0 0 0 chrX 66992215 66992237 -99658059 + AT_rich Low_complexity Low_complexity 1 22 0 6 1096 330 135 0 0 chrX 66992583 66992632 -99657664 + (A)n Simple_repeat Simple_repeat 1 49 0 6 1096 279 0 0 0 chrX 66992632 66992663 -99657633 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1096 330 135 0 0 chrX 66992663 66992687 -99657609 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1096 460 264 8 30 chrX 66993720 66993853 -99656443 + MER103 DNA DNA 37 166 0 6 1096 355 122 0 0 chrX 66994808 66994857 -99655439 - L1_Mus4 LINE L1 -390 6246 6198 6 1096 2681 80 51 0 chrX 66994857 66995232 -99655064 + L1_Mus4 LINE L1 6240 6633 -3 6 1096 1129 61 0 26 chrX 66995401 66995552 -99654744 + B1_Mus2 SINE Alu 1 147 0 6 1096 22 35 0 0 chrX 66996148 66996177 -99654119 + AT_rich Low_complexity Low_complexity 1 29 0 6 1096 689 168 11 17 chrX 66998801 66998977 -99651319 + GA-rich Low_complexity Low_complexity 4 178 0 6 1096 3212 83 5 2 chrX 66999182 66999619 -99650677 + L1_Mus3 LINE L1 6178 6615 -23 6 1096 593 282 59 27 chrX 67001425 67001647 -99648649 - MLT1A1 LTR MaLR 0 408 180 1 1096 747 303 96 31 chrX 67001687 67001980 -99648316 + Tigger5 DNA MER2_type 6 317 -2089 2 1096 328 271 23 30 chrX 67002084 67002194 -99648102 - MLT1A1 LTR MaLR -266 108 3 1 1096 664 294 28 68 chrX 67002218 67002581 -99647715 + L1MB5 LINE L1 5818 6176 -4 3 1096 24 0 0 0 chrX 67002622 67002646 -99647650 + AT_rich Low_complexity Low_complexity 1 24 0 4 1096 1176 218 105 20 chrX 67003690 67003985 -99646311 + ORR1D2 LTR MaLR 50 369 -1 5 1096 402 252 37 62 chrX 67004013 67004229 -99646067 - MLT1C LTR MaLR -33 434 178 6 1096 571 281 49 90 chrX 67006328 67006803 -99643493 - L1MB7 LINE L1 -10 6174 5724 7 1096 334 293 10 20 chrX 67006880 67006981 -99643315 - MLT1C LTR MaLR -48 419 320 8 1096 598 268 54 59 chrX 67007041 67007263 -99643033 - RMER5 LTR ERV1 -11 523 303 9 1096 459 113 0 0 chrX 67009552 67009623 -99640673 + (TAA)n Simple_repeat Simple_repeat 2 72 0 1 1096 186 43 0 0 chrX 67010075 67010098 -99640198 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1096 1177 274 51 9 chrX 67010220 67010555 -99639741 + Lx6 LINE L1 7086 7434 -26 1 1096 2431 200 62 23 chrX 67010708 67011270 -99639026 - RLTR31A_Mm LTR ERVK 0 584 1 1 1096 387 60 0 0 chrX 67011924 67011974 -99638322 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 1096 314 383 17 0 chrX 67012053 67012168 -99638128 + LTR75 LTR ERVL 5 121 -441 1 1096 798 355 57 20 chrX 67012191 67012544 -99637752 + LTR75 LTR ERVL 190 555 -7 1 1096 1436 297 17 45 chrX 67013783 67014316 -99635980 + Lx9 LINE L1 6956 7473 -171 1 1096 261 0 0 0 chrX 67014319 67014348 -99635948 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1096 216 86 0 0 chrX 67014357 67014392 -99635904 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 1 1096 249 311 38 22 chrX 67014435 67014561 -99635735 - MIRb SINE MIR -43 233 106 1 1096 733 295 84 0 chrX 67014783 67015010 -99635286 - MER58B DNA MER1_type -68 273 28 2 1096 296 229 134 10 chrX 67017265 67017362 -99632934 + MIR3 SINE MIR 73 181 -27 2 1096 5721 48 1 1 chrX 67017696 67018445 -99631851 - L1_Mus1 LINE L1 0 6567 5856 2 1096 4292 76 2 5 chrX 67018447 67019028 -99631268 + L1_Mus1 LINE L1 5219 5797 -86 2 1096 1132 55 7 0 chrX 67019028 67019174 -99631122 + B1_Mm SINE Alu 1 147 0 2 1096 2134 41 60 82 chrX 67019174 67019282 -99631014 + L1_Mus1 LINE L1 5798 5899 -668 2 1096 204 40 0 0 chrX 67019427 67019452 -99630844 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1096 21 0 0 0 chrX 67021574 67021595 -99628701 + AT_rich Low_complexity Low_complexity 1 21 0 2 1096 790 288 81 65 chrX 67022027 67022301 -99627995 - L1MB5 LINE L1 -21 6153 5880 2 1096 2125 75 34 10 chrX 67022301 67022597 -99627699 - L1_Mus1 LINE L1 -2 6565 6263 2 1096 790 288 81 65 chrX 67022597 67022768 -99627528 - L1MB5 LINE L1 -295 5879 5701 2 1096 3795 106 20 44 chrX 67023130 67023770 -99626526 - Lx LINE L1 0 6654 6030 2 1096 3214 73 7 5 chrX 67023792 67024232 -99626064 - L1_Mus3 LINE L1 0 6638 6198 2 1096 1104 95 6 0 chrX 67024232 67024390 -99625906 - Lx LINE L1 -636 6018 5860 2 1096 336 323 90 34 chrX 67024778 67025016 -99625280 + MIRc SINE MIR 8 261 -7 3 1096 902 116 7 0 chrX 67025565 67025712 -99624584 + (GAAA)n Simple_repeat Simple_repeat 1 148 0 3 1096 188 67 33 0 chrX 67026499 67026529 -99623767 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1096 22 35 0 0 chrX 67026725 67026754 -99623542 + AT_rich Low_complexity Low_complexity 1 29 0 3 1096 609 44 21 21 chrX 67028349 67028442 -99621854 - L1Md_T LINE L1 0 6582 6490 3 1096 2883 32 0 0 chrX 67029107 67029448 -99620848 - L1Md_A LINE L1 0 6582 6242 3 1096 23 0 0 0 chrX 67029688 67029711 -99620585 + AT_rich Low_complexity Low_complexity 1 23 0 3 1096 2544 38 16 3 chrX 67031110 67031425 -99618871 + L1Md_F2 LINE L1 5268 5586 -297 3 1096 7817 60 2 3 chrX 67031425 67032422 -99617874 + L1Md_F2 LINE L1 5587 6582 0 3 1096 361 364 0 0 chrX 67034458 67034568 -99615728 + PB1D10 SINE Alu 1 110 -7 3 1096 251 327 97 36 chrX 67035027 67035192 -99615104 - MIRc SINE MIR -70 198 24 3 1096 279 348 0 0 chrX 67035197 67035266 -99615030 - RMER30 DNA MER1_type -1 201 133 4 1096 360 299 20 39 chrX 67036469 67036622 -99613674 + GA-rich Low_complexity Low_complexity 1 150 0 4 1096 24 0 0 0 chrX 67039526 67039550 -99610746 + GC_rich Low_complexity Low_complexity 1 24 0 4 1096 515 328 0 28 chrX 67040709 67040891 -99609405 + MER58B DNA MER1_type 103 279 -62 4 1096 182 329 83 24 chrX 67042674 67042758 -99607538 + MIR SINE MIR 35 123 -85 4 1096 189 74 0 0 chrX 67043446 67043473 -99606823 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1096 1062 73 27 27 chrX 67045190 67045374 -99604922 + L1_Mus3 LINE L1 6455 6638 0 4 1096 580 317 9 51 chrX 67045803 67046020 -99604276 - B3A SINE B2 -6 210 1 4 1096 223 388 24 16 chrX 67046101 67046224 -99604072 - L2c LINE L2 -1 3386 3263 4 1096 225 65 0 0 chrX 67046475 67046506 -99603790 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 1096 745 316 59 45 chrX 67047576 67047864 -99602432 - B4A SINE B4 0 292 1 5 1096 938 284 57 21 chrX 67048942 67049273 -99601023 - ORR1E LTR MaLR -16 343 1 5 1096 238 316 25 58 chrX 67050588 67050709 -99599587 - PB1D10 SINE Alu 0 117 1 5 1096 238 297 107 13 chrX 67051822 67051972 -99598324 - Tigger14a DNA MER2_type -30 294 131 5 1096 2957 76 8 5 chrX 67052558 67052957 -99597339 - MTB LTR MaLR 0 400 1 5 1096 255 348 9 0 chrX 67053001 67053116 -99597180 + (TG)n Simple_repeat Simple_repeat 1 116 0 5 1096 1829 219 97 36 chrX 67053120 67053647 -99596649 - RMER2 LTR ERV1 0 567 9 5 1096 647 292 82 18 chrX 67054248 67054530 -99595766 - L1MB8 LINE L1 -19 6159 5860 5 1096 316 289 67 105 chrX 67057110 67057377 -99592919 + ORR1E LTR MaLR 98 354 -5 5 1096 320 329 36 24 chrX 67058772 67058937 -99591359 + MIR SINE MIR 61 227 -35 5 1096 191 316 202 0 chrX 67058991 67059105 -99591191 + MIR SINE MIR 13 149 -113 6 1096 234 245 18 97 chrX 67059143 67059256 -99591040 + RMER12 LTR ERVK 641 744 -578 6 1096 1593 43 10 0 chrX 67059771 67059980 -99590316 - L1Md_F2 LINE L1 0 6582 6372 6 1096 3108 14 0 0 chrX 67060170 67060516 -99589780 - ORR1A0 LTR MaLR 0 346 1 6 1096 279 0 0 0 chrX 67061662 67061693 -99588603 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1096 201 167 95 0 chrX 67062551 67062593 -99587703 - MIRc SINE MIR -112 156 111 6 1096 513 0 0 0 chrX 67063437 67063494 -99586802 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 1096 213 260 57 86 chrX 67063662 67063767 -99586529 + MIRb SINE MIR 41 142 -126 6 1096 356 0 0 22 chrX 67064497 67064542 -99585754 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 6 1096 212 263 73 31 chrX 67065328 67065460 -99584836 + MIRc SINE MIR 64 204 -4 6 1096 391 297 0 18 chrX 67065712 67065825 -99584471 + MIRb SINE MIR 26 136 -132 7 1096 1340 77 22 0 chrX 67065980 67066163 -99584133 + B2_Mm2 SINE B2 1 187 -8 7 1096 753 345 138 14 chrX 67066366 67067096 -99583200 - L2a LINE L2 -95 3331 2508 7 1096 328 356 75 0 chrX 67068003 67068149 -99582147 + MIRb SINE MIR 104 260 -8 7 1096 333 0 0 0 chrX 67070617 67070654 -99579642 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1096 321 26 0 0 chrX 67072770 67072808 -99577488 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1096 646 264 188 15 chrX 67072823 67073084 -99577212 - Lx8 LINE L1 -31 7442 7137 7 1096 846 249 23 23 chrX 67073098 67073312 -99576984 - B3 SINE B2 -1 215 2 7 1096 23 0 0 0 chrX 67073510 67073533 -99576763 + AT_rich Low_complexity Low_complexity 1 23 0 7 1096 408 287 35 0 chrX 67076293 67076436 -99573860 - B1F2 SINE Alu 0 149 2 7 1096 340 316 70 120 chrX 67077792 67078091 -99572205 + B4A SINE B4 1 284 -8 8 1096 495 277 38 6 chrX 67078336 67078496 -99571800 + MER5A1 DNA MER1_type 1 165 -1 8 1096 24 53 0 0 chrX 67078505 67078543 -99571753 + AT_rich Low_complexity Low_complexity 1 38 0 8 1096 252 275 62 111 chrX 67078549 67078733 -99571563 - MIRc SINE MIR -77 185 14 8 1096 833 301 68 146 chrX 67079239 67079752 -99570544 - MLT1D LTR MaLR -32 473 1 8 1096 2169 163 15 29 chrX 67080809 67081220 -99569076 + Lx4B LINE L1 6645 7049 -9 8 1096 7598 36 1 4 chrX 67084400 67085318 -99564978 - L1Md_F3 LINE L1 -17 6567 5653 8 1096 1150 75 0 0 chrX 67085729 67085875 -99564421 + B1_Mus2 SINE Alu 2 147 0 8 1096 303 307 77 77 chrX 67085896 67086118 -99564178 - MIRb SINE MIR -39 229 8 8 1096 366 255 249 46 chrX 67086955 67087128 -99563168 - ID_B1 SINE B4 -15 209 2 8 1096 299 25 25 0 chrX 67092590 67092630 -99557666 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 9 1096 5086 113 32 3 chrX 67092631 67093383 -99556913 - Lx4A LINE L1 -16 7042 6269 9 1096 324 0 0 0 chrX 67093524 67093560 -99556736 + (TG)n Simple_repeat Simple_repeat 1 36 0 9 1096 306 0 0 0 chrX 67093560 67093593 -99556703 + (GA)n Simple_repeat Simple_repeat 1 34 0 9 1096 477 0 0 0 chrX 67096917 67096970 -99553326 + (TA)n Simple_repeat Simple_repeat 2 54 0 9 1096 930 161 84 142 chrX 67097579 67097714 -99552582 - URR1B DNA MER1_type 0 225 104 9 1096 1649 32 0 0 chrX 67097714 67097904 -99552392 - B2_Mm1t SINE B2 -1 192 3 9 1096 930 161 84 142 chrX 67097904 67098007 -99552289 - URR1B DNA MER1_type -122 103 1 9 1096 4313 198 65 3 chrX 67099288 67100216 -99550080 - Lx2B LINE L1 -2 6998 6014 9 1096 268 281 22 22 chrX 67101687 67101778 -99548518 + CT-rich Low_complexity Low_complexity 6 96 0 9 1096 186 320 0 0 chrX 67102133 67102236 -99548060 + (CTA)n Simple_repeat Simple_repeat 1 103 0 9 1096 417 39 0 0 chrX 67102785 67102836 -99547460 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 1096 297 263 52 10 chrX 67103649 67103745 -99546551 + MER5B DNA MER1_type 63 162 -16 1 1096 416 257 111 56 chrX 67104475 67104673 -99545623 + MER106A DNA MER1_type 27 235 -1 1 1096 180 0 0 0 chrX 67105027 67105047 -99545249 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1096 278 350 116 43 chrX 67106030 67106194 -99544102 - MER20 DNA MER1_type -42 177 2 1 1096 953 188 84 44 chrX 67106747 67106997 -99543299 - Lx5 LINE L1 0 7050 6791 1 1096 497 329 7 19 chrX 67107048 67107203 -99543093 + RSINE1 SINE B4 2 154 -11 1 1096 315 237 26 0 chrX 67107433 67107509 -99542787 + ID4 SINE ID 2 79 -4 1 1096 412 288 192 0 chrX 67107654 67107711 -99542585 + B3A SINE B2 1 60 -138 1 1096 432 0 0 0 chrX 67107711 67107759 -99542537 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1096 412 311 106 15 chrX 67107759 67107895 -99542401 + B3A SINE B2 61 215 -1 1 1096 200 170 0 78 chrX 67107904 67107955 -99542341 + A-rich Low_complexity Low_complexity 2 48 0 1 1097 192 97 0 0 chrX 67109349 67109380 -99540916 + (CATG)n Simple_repeat Simple_repeat 4 34 0 1 1097 331 329 87 20 chrX 67111342 67111362 -99538934 - MER5A DNA MER1_type -28 161 142 1 1097 312 27 0 0 chrX 67111362 67111399 -99538897 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 1097 331 329 87 20 chrX 67111399 67111527 -99538769 - MER5A DNA MER1_type -48 141 3 1 1097 192 116 0 104 chrX 67111927 67112023 -99538273 + A-rich Low_complexity Low_complexity 5 90 0 1 1097 306 0 0 0 chrX 67113974 67114008 -99536288 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1097 303 28 0 0 chrX 67114150 67114186 -99536110 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1097 764 228 6 0 chrX 67114190 67114397 -99535899 - L1_Mur3 LINE L1 -1254 4623 4415 1 1097 23 0 0 0 chrX 67114408 67114431 -99535865 + AT_rich Low_complexity Low_complexity 1 23 0 1 1097 302 307 94 31 chrX 67114588 67114907 -99535389 - L1MA5 LINE L1 -41 6259 5921 1 1097 405 116 0 0 chrX 67115870 67115939 -99534357 - L1_Mus2 LINE L1 0 6566 6498 1 1097 219 170 0 0 chrX 67116594 67116641 -99533655 + CT-rich Low_complexity Low_complexity 3 49 0 1 1097 22 0 0 0 chrX 67118224 67118246 -99532050 + AT_rich Low_complexity Low_complexity 1 22 0 1 1097 222 352 39 58 chrX 67118483 67118688 -99531608 - MIR SINE MIR -55 207 7 1 1097 1368 87 5 5 chrX 67118724 67118910 -99531386 - B2_Mm2 SINE B2 -9 186 1 1 1097 188 67 0 32 chrX 67124099 67124130 -99526166 + (TTTC)n Simple_repeat Simple_repeat 1 30 0 1 1097 192 158 0 0 chrX 67124638 67124676 -99525620 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 1097 1058 89 0 0 chrX 67126124 67126259 -99524037 + B1_Mus1 SINE Alu 5 139 -9 1 1097 243 0 0 0 chrX 67126259 67126286 -99524010 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1097 269 257 14 28 chrX 67128137 67128209 -99522087 + CT-rich Low_complexity Low_complexity 2 72 0 1 1097 522 83 0 0 chrX 67128410 67128482 -99521814 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 1097 360 0 0 0 chrX 67129451 67129491 -99520805 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1097 296 192 40 14 chrX 67130558 67130632 -99519664 - RLTR16 LTR ERVK 0 505 430 1 1097 2343 170 57 13 chrX 67130628 67130711 -99519585 - RLTR16 LTR ERVK -12 493 414 1 1097 288 0 0 0 chrX 67130711 67130743 -99519553 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1097 2343 170 57 13 chrX 67130743 67131131 -99519165 - RLTR16 LTR ERVK -92 413 1 1 1097 228 394 66 0 chrX 67132219 67132356 -99517940 - MIRc SINE MIR -47 221 76 1 1097 377 367 112 19 chrX 67133133 67133552 -99516744 - Lx8 LINE L1 -28 7445 6988 1 1097 556 112 31 0 chrX 67133552 67133650 -99516646 + (TTCC)n Simple_repeat Simple_repeat 2 102 0 1 1097 408 40 0 0 chrX 67133653 67133703 -99516593 + (TCC)n Simple_repeat Simple_repeat 3 52 0 1 1097 625 294 57 9 chrX 67133827 67134057 -99516239 - Lx7 LINE L1 -910 6786 6546 1 1097 202 295 0 32 chrX 67134066 67134129 -99516167 + GA-rich Low_complexity Low_complexity 3 63 0 1 1097 893 101 5 53 chrX 67134155 67134344 -99515952 + G-rich Low_complexity Low_complexity 1 180 0 1 1097 306 0 0 0 chrX 67134344 67134378 -99515918 + (GA)n Simple_repeat Simple_repeat 1 34 0 1 1097 38 0 0 0 chrX 67134467 67134505 -99515791 + AT_rich Low_complexity Low_complexity 1 38 0 1 1097 8096 130 26 6 chrX 67134505 67136107 -99514189 - Lx2 LINE L1 -2 6995 5360 1 1097 5456 76 25 12 chrX 67136135 67136202 -99514094 - L1VL4 LINE L1 -1850 1709 1648 1 1097 1685 24 401 0 chrX 67136202 67136449 -99513847 - ORR1A1 LTR MaLR 0 346 1 1 1097 5456 100 28 24 chrX 67136449 67137887 -99512409 - L1VL4 LINE L1 -1912 1647 193 1 1097 306 0 0 0 chrX 67138368 67138402 -99511894 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 1097 306 0 0 0 chrX 67138402 67138435 -99511861 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 1097 1276 322 5 18 chrX 67138577 67139127 -99511169 - Lx7 LINE L1 -227 7246 6690 1 1097 622 265 92 43 chrX 67139773 67140077 -99510219 - Lx8 LINE L1 -25 7448 7130 1 1097 463 272 88 6 chrX 67140083 67140242 -99510054 + Lx8 LINE L1 6922 7093 -380 1 1097 656 224 7 33 chrX 67140407 67140559 -99509737 - B1_Mur2 SINE Alu -1 148 1 1 1097 973 103 0 7 chrX 67140604 67140750 -99509546 - ORR1A4-int LTR MaLR -1814 149 5 1 1097 2010 123 11 66 chrX 67140754 67141102 -99509194 - ORR1A4 LTR MaLR 0 329 1 1 1097 661 329 104 96 chrX 67141365 67141939 -99508357 - MLT1E1 LTR MaLR -11 643 4 1 1097 459 185 0 0 chrX 67143309 67143401 -99506895 + (TAA)n Simple_repeat Simple_repeat 3 94 0 1 1097 789 305 55 66 chrX 67143466 67143845 -99506451 + MLT1B LTR MaLR 12 386 -4 1 1097 189 324 156 36 chrX 67146886 67147078 -99503218 + L2a LINE L2 2726 2940 -479 1 1097 273 29 0 0 chrX 67147170 67147204 -99503092 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1097 306 312 180 16 chrX 67147497 67147686 -99502610 - L2a LINE L2 -25 3401 3182 1 1097 275 320 0 20 chrX 67147675 67147777 -99502519 - L2a LINE L2 -1740 1679 1580 1 1097 1513 283 101 59 chrX 67149459 67150337 -99499959 - Charlie1a DNA MER1_type -419 1036 122 1 1097 225 329 24 35 chrX 67150553 67150638 -99499658 + L2a LINE L2 3342 3425 -1 1 1097 407 363 0 9 chrX 67151588 67151702 -99498594 + RSINE1 SINE B4 2 114 -51 1 1097 400 363 142 31 chrX 67151765 67152123 -99498173 - FordPrefect DNA Tip100 -8 1675 1278 1 1097 821 175 26 0 chrX 67152142 67152296 -99498000 - Lx9 LINE L1 -851 6793 6636 1 1097 326 183 95 9 chrX 67152300 67152416 -99497880 + Lx9 LINE L1 7518 7643 -1 1 1097 216 91 0 0 chrX 67152436 67152457 -99497839 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1097 1194 55 0 0 chrX 67152457 67152603 -99497693 + B1_Mm SINE Alu 2 147 0 1 1097 216 91 0 0 chrX 67152603 67152614 -99497682 + (A)n Simple_repeat Simple_repeat 1 11 0 1 1097 285 51 0 0 chrX 67152833 67152872 -99497424 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1097 293 349 9 133 chrX 67154192 67154417 -99495879 + ORR1E LTR MaLR 1 197 -162 1 1097 333 82 0 39 chrX 67154893 67154944 -99495352 - HAL1-3A_ME LINE L1 -838 2020 1972 1 1097 860 146 14 20 chrX 67155377 67155524 -99494772 + B1_Mus2 SINE Alu 1 146 -1 1 1097 461 163 0 11 chrX 67155531 67155624 -99494672 + GA-rich Low_complexity Low_complexity 2 93 0 1 1097 25 0 0 0 chrX 67156013 67156038 -99494258 + AT_rich Low_complexity Low_complexity 1 25 0 1 1097 5059 131 94 0 chrX 67156042 67156861 -99493435 - Lx2 LINE L1 -1 6996 6101 1 1097 1287 162 35 0 chrX 67156861 67157090 -99493206 + L1_Mm LINE L1 5455 5691 -192 1 1097 2754 125 65 4 chrX 67157072 67157545 -99492751 - L1_Mm LINE L1 -89 5794 5293 1 1097 3663 90 130 0 chrX 67157546 67158093 -99492203 - L1Md_F2 LINE L1 -2 6580 5963 1 1097 7311 75 48 10 chrX 67158094 67159629 -99490667 - L1Md_F3 LINE L1 -16 6568 4956 1 1097 8871 153 17 14 chrX 67159635 67159908 -99490388 + L1_Mur2 LINE L1 3572 3855 -2022 1 1097 212 0 36 0 chrX 67159908 67159936 -99490360 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 1097 8871 153 17 14 chrX 67159936 67161343 -99488953 + L1_Mur2 LINE L1 3856 5256 -621 1 1097 12420 87 33 32 chrX 67161340 67161389 -99488907 + MusHAL1 LINE L1 593 641 -2071 1 1097 3233 46 5 5 chrX 67161389 67161785 -99488511 - MTA_Mm LTR MaLR 0 396 1 1 1097 12420 87 33 32 chrX 67161785 67162607 -99487689 + MusHAL1 LINE L1 642 1433 -1279 1 1097 405 0 0 0 chrX 67162607 67162652 -99487644 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1097 12420 87 33 32 chrX 67162652 67163862 -99486434 + MusHAL1 LINE L1 1434 2677 -35 1 1097 273 59 0 0 chrX 67163863 67163897 -99486399 - U2 snRNA snRNA -154 34 1 1 1097 239 23 0 0 chrX 67163897 67163941 -99486355 + MusHAL1 LINE L1 2665 2708 -4 1 1097 481 246 76 24 chrX 67164034 67164214 -99486082 + MLT1I LTR MaLR 237 433 -11 1 1097 2803 21 3 9 chrX 67164593 67164931 -99485365 - L1Md_F3 LINE L1 0 6584 6249 1 1097 230 296 0 14 chrX 67165156 67165228 -99485068 + MLT1A1 LTR MaLR 338 408 0 1 1097 1230 227 106 77 chrX 67165264 67165613 -99484683 - MTEb LTR MaLR -11 368 10 1 1097 785 223 90 192 chrX 67165623 67165667 -99484629 - MTE2a LTR MaLR 0 379 337 1 1097 3144 65 17 0 chrX 67165667 67166079 -99484217 + L1_Mus1 LINE L1 6149 6567 0 1 1097 785 223 90 192 chrX 67166079 67166456 -99483840 - MTE2a LTR MaLR -43 336 1 1 1097 2440 205 44 26 chrX 67166717 67167214 -99483082 + RLTR18B LTR ERVK 1 506 -6 1 1097 325 344 16 0 chrX 67168390 67168512 -99481784 - Lx8 LINE L1 -456 7017 6894 1 1097 40 21 0 0 chrX 67168959 67169006 -99481290 + AT_rich Low_complexity Low_complexity 1 47 0 1 1097 433 297 96 6 chrX 67169151 67169307 -99480989 + MER45C DNA Tip100 2 171 -782 1 1097 28 61 0 0 chrX 67169864 67169913 -99480383 + AT_rich Low_complexity Low_complexity 1 49 0 1 1097 407 266 34 68 chrX 67169943 67170060 -99480236 - RSINE1 SINE B4 -41 124 12 1 1097 185 267 32 48 chrX 67170299 67170362 -99479934 + MIRm SINE MIR 110 171 -105 1 1097 821 112 56 7 chrX 67170566 67170710 -99479586 - Lx4A LINE L1 -4 7054 6904 1 1097 1068 70 0 0 chrX 67171035 67171177 -99479119 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 1 1097 287 318 53 80 chrX 67172233 67172421 -99477875 + MIR SINE MIR 70 252 -10 1 1097 415 289 37 56 chrX 67173122 67173283 -99477013 + RLTR14 LTR ERV1 225 382 0 2 1097 354 291 168 17 chrX 67173450 67173688 -99476608 - Lx8 LINE L1 -3 7470 7197 2 1097 4228 148 36 110 chrX 67173710 67174689 -99475607 - RMER17A2 LTR ERVK 0 906 1 2 1097 2454 290 24 21 chrX 67174745 67175617 -99474679 - Lx8 LINE L1 -352 7121 6247 2 1097 362 290 49 111 chrX 67175976 67176202 -99474094 - MIR SINE MIR -19 243 31 2 1097 270 0 0 0 chrX 67176202 67176232 -99474064 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 1097 362 290 49 111 chrX 67176232 67176249 -99474047 - MIR SINE MIR -232 30 15 2 1097 854 304 115 14 chrX 67176635 67177303 -99472993 + L1MB2 LINE L1 5406 6140 -31 2 1097 337 361 73 9 chrX 67178040 67178258 -99472038 + MIR SINE MIR 28 259 -3 2 1097 185 200 80 0 chrX 67178776 67178826 -99471470 - MIR SINE MIR -55 207 154 2 1097 332 183 16 21 chrX 67178884 67178969 -99471327 - MLT1A1 LTR MaLR -13 395 305 2 1097 1832 136 11 0 chrX 67179011 67179297 -99470999 - Lx2B LINE L1 0 7000 6712 2 1097 845 0 84 12 chrX 67179414 67179581 -99470715 + (GA)n Simple_repeat Simple_repeat 2 180 0 2 1097 292 271 115 0 chrX 67180067 67180163 -99470133 + MLT1A1 LTR MaLR 2 108 -300 2 1097 459 0 0 0 chrX 67180360 67180411 -99469885 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1097 21 36 0 0 chrX 67182867 67182895 -99467401 + AT_rich Low_complexity Low_complexity 1 28 0 2 1097 1002 82 0 22 chrX 67183725 67183862 -99466434 + B1_Mus1 SINE Alu 2 135 -13 2 1097 196 53 53 0 chrX 67183862 67183900 -99466396 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 2 1097 36122 32 1 1 chrX 67184082 67191697 -99458599 - L1Md_T LINE L1 0 6585 1 2 1097 247 248 0 53 chrX 67191767 67191843 -99458453 - PB1D10 SINE Alu 0 117 49 2 1097 620 87 11 0 chrX 67191944 67192036 -99458260 + (TC)n Simple_repeat Simple_repeat 2 94 0 2 1097 1246 291 75 33 chrX 67192478 67193196 -99457100 - L1MC3 LINE L1 -114 7671 6924 2 1097 7845 40 6 1 chrX 67193230 67194500 -99455796 - L1Md_F2 LINE L1 0 6582 5308 2 1097 658 81 0 0 chrX 67194498 67194585 -99455711 + L1Md_F2 LINE L1 5499 5585 -298 2 1097 8035 51 0 6 chrX 67194586 67195587 -99454709 + L1Md_F2 LINE L1 5587 6581 -1 2 1097 3217 106 8 2 chrX 67195843 67196317 -99453979 - Lx2 LINE L1 -2 6995 6519 2 1097 821 243 74 31 chrX 67196371 67196600 -99453696 + MTD LTR MaLR 1 239 -180 2 1097 5222 54 15 6 chrX 67196801 67197472 -99452824 + L1Md_F3 LINE L1 5896 6572 -12 2 1097 471 48 0 0 chrX 67198060 67198122 -99452174 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 1097 227 324 0 28 chrX 67199216 67199324 -99450972 + GA-rich Low_complexity Low_complexity 4 108 0 2 1097 4148 145 13 137 chrX 67199424 67200372 -99449924 + RMER21B LTR ERV1 1 830 -12 2 1097 2520 158 96 16 chrX 67200372 67200861 -99449435 + RLTR11A LTR ERVK 1 528 0 2 1097 467 139 38 0 chrX 67200865 67200944 -99449352 + RMER21B LTR ERV1 761 842 0 2 1097 413 290 77 50 chrX 67201365 67201626 -99448670 + MER97c DNA MER1_type? 107 374 -716 2 1097 1799 225 171 13 chrX 67201863 67202417 -99447879 + Lx6 LINE L1 6370 7011 -449 2 1097 733 182 36 67 chrX 67202418 67202536 -99447760 + Lx7 LINE L1 7459 7571 -125 2 1097 2803 149 45 26 chrX 67202536 67203066 -99447230 - Lx3C LINE L1 -2 6974 6435 2 1097 733 198 47 66 chrX 67203066 67203205 -99447091 + Lx7 LINE L1 7572 7675 -21 2 1097 1835 132 88 19 chrX 67203226 67203590 -99446706 - L1_Mus4 LINE L1 -1 6635 6247 2 1097 252 272 104 12 chrX 67204091 67204255 -99446041 - L1MEc LINE L1 -5295 1105 927 2 1097 550 335 95 0 chrX 67204320 67204583 -99445713 - MLT1A0 LTR MaLR -15 350 63 2 1097 500 284 12 36 chrX 67204667 67204835 -99445461 - RSINE1 SINE B4 0 165 2 2 1097 459 291 39 19 chrX 67204860 67205014 -99445282 + RSINE1 SINE B4 4 160 -5 2 1097 591 257 18 57 chrX 67207612 67207839 -99442457 + L1M2 LINE L1 5445 5662 -650 2 1097 355 335 34 76 chrX 67207934 67208170 -99442126 + ORR1D2 LTR MaLR 1 226 -144 2 1097 311 234 153 36 chrX 67208215 67208326 -99441970 + ORR1D2 LTR MaLR 256 379 0 2 1097 429 235 69 17 chrX 67208326 67208499 -99441797 + L1MB3 LINE L1 5783 5964 -219 2 1097 342 325 139 41 chrX 67208966 67209232 -99441064 - MLT1A0 LTR MaLR -2 363 72 2 1097 330 320 108 7 chrX 67210171 67210319 -99439977 + MIRb SINE MIR 74 236 -32 2 1097 561 15 0 0 chrX 67210934 67211000 -99439296 + (GAAAA)n Simple_repeat Simple_repeat 5 70 0 2 1097 298 341 46 31 chrX 67211347 67211477 -99438819 + L2 LINE L2 2646 2777 -642 2 1097 204 273 0 0 chrX 67211484 67211528 -99438768 + MER5B DNA MER1_type 7 50 -128 2 1097 651 291 121 51 chrX 67212000 67212413 -99437883 - MLT2D LTR ERVL -10 454 13 2 1097 1082 108 0 0 chrX 67212579 67212727 -99437569 - B1_Mus1 SINE Alu 0 148 1 2 1097 855 211 29 12 chrX 67213168 67213341 -99436955 + ORR1D1 LTR MaLR 1 176 -198 2 1097 401 179 0 0 chrX 67213354 67213421 -99436875 - URR1B DNA MER1_type 0 225 159 2 1097 444 97 125 0 chrX 67213604 67213676 -99436620 + B1_Mur2 SINE Alu 40 120 -29 2 1097 213 39 0 0 chrX 67213681 67213707 -99436589 + (CAAT)n Simple_repeat Simple_repeat 4 29 0 2 1097 7626 48 7 2 chrX 67213866 67214857 -99435439 - L1Md_F2 LINE L1 0 6582 5587 2 1097 527 363 69 4 chrX 67215156 67215402 -99434894 + LTR16A LTR ERVL 162 423 -28 2 1097 1156 106 42 24 chrX 67216019 67216232 -99434064 - Lx LINE L1 0 6654 6438 2 1097 197 33 33 0 chrX 67218147 67218177 -99432119 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1097 334 350 10 0 chrX 67218222 67218325 -99431971 + PB1D10 SINE Alu 1 104 -13 2 1097 630 409 55 21 chrX 67218914 67219296 -99431000 + LTR16A LTR ERVL 11 405 -46 2 1097 189 303 238 14 chrX 67219429 67219576 -99430720 + L2a LINE L2 3233 3412 -14 2 1097 1998 141 6 9 chrX 67220048 67220378 -99429918 + ORR1A4 LTR MaLR 1 329 0 2 1097 453 328 76 107 chrX 67220543 67220871 -99429425 + ORR1E LTR MaLR 2 319 -55 2 1097 33 25 0 0 chrX 67221400 67221440 -99428856 + AT_rich Low_complexity Low_complexity 1 40 0 2 1097 24173 143 29 24 chrX 67221507 67227773 -99422523 + Lx LINE L1 365 6654 0 2 1097 433 0 35 0 chrX 67227914 67227971 -99422325 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1097 206 146 62 0 chrX 67228101 67228149 -99422147 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 2 1097 287 354 16 94 chrX 67228399 67228527 -99421769 - MER70B LTR ERVL -248 330 213 2 1097 535 291 34 67 chrX 67229043 67229251 -99421045 - MTEa LTR MaLR 0 379 153 2 1097 924 297 22 139 chrX 67229263 67229673 -99420623 + MTEb LTR MaLR 18 379 0 2 1097 436 209 0 34 chrX 67229713 67229802 -99420494 - MTEa LTR MaLR -276 94 9 2 1097 1109 253 15 4 chrX 67230092 67230362 -99419934 + Tigger16b DNA Tigger 62 334 -3 2 1097 320 287 65 55 chrX 67232045 67232363 -99417933 - L1ME3 LINE L1 -1781 6004 5682 2 1097 279 0 0 0 chrX 67232363 67232394 -99417902 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1097 1580 264 45 8 chrX 67232687 67233046 -99417250 - MTE2b LTR MaLR -7 372 1 2 1097 4401 73 12 8 chrX 67233335 67233928 -99416368 + L1_Mus2 LINE L1 5972 6566 0 2 1097 257 212 12 59 chrX 67234384 67234469 -99415827 - L1ME3 LINE L1 -576 5603 5523 2 1097 185 336 28 90 chrX 67234640 67234784 -99415512 + L2 LINE L2 2729 2863 -556 2 1097 231 200 20 0 chrX 67235398 67235448 -99414848 + L1ME1 LINE L1 6128 6178 -1 2 1097 1127 75 0 0 chrX 67235666 67235812 -99414484 + B1_Mus2 SINE Alu 2 147 0 2 1097 256 215 131 61 chrX 67236049 67236148 -99414148 - MLT1A1 LTR MaLR -12 396 291 2 1097 30 0 0 0 chrX 67236378 67236408 -99413888 + AT_rich Low_complexity Low_complexity 1 30 0 2 1097 934 60 15 0 chrX 67236412 67236546 -99413750 - L1Md_F2 LINE L1 -10 6572 6437 2 1097 896 148 6 0 chrX 67236592 67236761 -99413535 + (TA)n Simple_repeat Simple_repeat 2 171 0 2 1097 1113 307 35 28 chrX 67237016 67237806 -99412490 - L1MEf LINE L1 -3240 3304 2506 2 1097 4462 70 3 5 chrX 67237806 67238396 -99411900 - L1_Mus1 LINE L1 0 6567 5979 2 1097 374 288 11 37 chrX 67238396 67238434 -99411862 - L1MEf LINE L1 -4132 2508 2471 2 1097 400 325 117 39 chrX 67238435 67238717 -99411579 - L1MEf LINE L1 -4074 2566 2263 2 1097 3061 61 10 5 chrX 67238873 67239267 -99411029 - MTA_Mm LTR MaLR 0 396 1 2 1097 1276 28 113 0 chrX 67239267 67239444 -99410852 - MTA_Mm-int LTR MaLR 0 1098 902 2 137 11723 42 7 1 chrX 67239445 67241293 -99409003 + L1Md_F3 LINE L1 4391 6252 -332 2 1098 4238 90 3 15 chrX 67241295 67241880 -99408416 + RLTR10-int LTR ERVK 1409 1986 -1 2 1098 2005 112 25 18 chrX 67241880 67242260 -99408036 + RLTR10A LTR ERVK 1 390 0 2 1098 2994 75 31 0 chrX 67242260 67242673 -99407623 + L1_Mm LINE L1 3344 3769 -2114 2 1098 3002 42 10 0 chrX 67242673 67243059 -99407237 - MTA_Mm-int LTR MaLR -708 390 1 2 1098 3212 38 10 8 chrX 67243059 67243454 -99406842 - MTA_Mm LTR MaLR 0 396 1 2 1098 368 228 112 90 chrX 67243720 67243788 -99406508 - L1MEf LINE L1 -6316 231 175 2 1098 4755 44 31 3 chrX 67243788 67244398 -99405898 - L1Md_F2 LINE L1 -8 6574 5948 2 1098 368 228 112 90 chrX 67244398 67244517 -99405779 - L1MEf LINE L1 -6373 174 40 2 1098 251 312 79 124 chrX 67244615 67244995 -99405301 + MER110A LTR ERV1 86 448 -20 2 1098 964 339 128 17 chrX 67245022 67245484 -99404812 - MLT2B2 LTR ERVL 0 515 3 2 1098 31 26 0 0 chrX 67245716 67245754 -99404542 + AT_rich Low_complexity Low_complexity 1 38 0 2 1098 523 282 32 57 chrX 67245799 67245957 -99404339 + RSINE1 SINE B4 12 165 0 2 1098 439 349 8 0 chrX 67246146 67246278 -99404018 + RSINE1 SINE B4 5 137 -28 2 1098 279 0 0 0 chrX 67246378 67246409 -99403887 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1098 559 269 52 7 chrX 67247179 67247314 -99402982 - RSINE1 SINE B4 -10 155 15 2 1098 418 324 0 9 chrX 67247754 67247863 -99402433 + ID_B1 SINE B4 78 185 -39 2 1098 2285 192 24 10 chrX 67247868 67248278 -99402018 + MTC LTR MaLR 6 421 0 2 1098 378 283 36 7 chrX 67248588 67248727 -99401569 + L1MA5 LINE L1 6145 6287 -13 2 1098 639 274 40 68 chrX 67248773 67249185 -99401111 + MT2A LTR ERVL 1 553 -48 2 1098 1094 177 79 0 chrX 67249202 67249405 -99400891 + URR1A DNA MER1_type 8 226 0 3 1098 396 305 25 56 chrX 67249405 67249457 -99400839 - CYRA11_Mm Unknown Y-chromosome -446 171 126 3 1098 576 162 0 0 chrX 67249464 67249569 -99400727 + (TA)n Simple_repeat Simple_repeat 2 106 0 3 1098 966 196 77 19 chrX 67249626 67249886 -99400410 + Lx9 LINE L1 7255 7529 -115 3 1098 687 88 26 0 chrX 67250056 67250169 -99400127 + (TTTCC)n Simple_repeat Simple_repeat 5 120 0 3 1098 456 333 8 8 chrX 67252954 67253087 -99397209 - B1F SINE Alu -10 139 7 3 1098 473 272 24 8 chrX 67253756 67253882 -99396414 + MLT1A0 LTR MaLR 2 129 -236 3 1098 5353 156 30 64 chrX 67253989 67255195 -99395101 + L1VL2 LINE L1 9 1041 -5294 3 1098 180 0 0 0 chrX 67255476 67255496 -99394800 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1098 309 26 0 0 chrX 67255758 67255796 -99394500 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 3 1098 194 91 30 0 chrX 67258208 67258241 -99392055 + (TCTCCC)n Simple_repeat Simple_repeat 4 37 0 3 1098 396 0 0 0 chrX 67258243 67258287 -99392009 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 1098 447 19 0 0 chrX 67260674 67260726 -99389570 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 1098 255 125 0 0 chrX 67261186 67261226 -99389070 + (T)n Simple_repeat Simple_repeat 1 40 0 3 1098 243 79 0 0 chrX 67261495 67261533 -99388763 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1098 223 314 187 11 chrX 67262462 67262649 -99387647 + MIR SINE MIR 43 262 0 3 1098 1057 135 72 0 chrX 67262723 67262916 -99387380 - RMER6C LTR ERVK 0 690 484 3 1098 296 224 81 162 chrX 67262951 67263111 -99387185 - B4A SINE B4 -105 187 41 3 1098 545 160 14 107 chrX 67262976 67263145 -99387151 - MT2B LTR ERVL -314 287 154 3 1098 674 148 28 0 chrX 67263122 67263230 -99387066 - RMER6C LTR ERVK -579 111 1 3 1098 390 205 0 0 chrX 67263267 67263350 -99386946 + (TA)n Simple_repeat Simple_repeat 1 83 0 3 1098 302 244 75 43 chrX 67263350 67263444 -99386852 + L1MCa LINE L1 1901 1997 -4511 3 1098 226 305 71 90 chrX 67264906 67265061 -99385235 + MIR SINE MIR 1 152 -110 3 1098 183 42 0 0 chrX 67265539 67265563 -99384733 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 3 1098 917 133 116 6 chrX 67265563 67265744 -99384552 - Lx2 LINE L1 -22 6975 6775 3 1098 606 155 5 0 chrX 67265739 67265848 -99384448 - Lx2 LINE L1 -352 6645 6557 3 1098 3875 201 9 67 chrX 67266169 67266925 -99383371 + L1VL4 LINE L1 137 829 -5473 3 1098 1136 58 0 0 chrX 67266925 67267064 -99383232 + B1_Mm SINE Alu 1 139 -8 3 1098 3875 195 8 69 chrX 67267064 67267255 -99383041 + L1VL4 LINE L1 830 989 -5313 3 1098 26193 137 9 3 chrX 67267263 67271798 -99378498 + L1_Mus1 LINE L1 1471 6035 -532 3 1098 543 281 22 6 chrX 67271827 67272006 -99378290 + L1M2 LINE L1 4721 4902 -1241 3 1098 3083 51 10 0 chrX 67272083 67272476 -99377820 + L1Md_F3 LINE L1 6176 6572 -12 3 1098 517 255 25 0 chrX 67272650 67272817 -99377479 - L1MA4 LINE L1 -412 5888 5718 3 1098 822 260 79 26 chrX 67272827 67273218 -99377078 + L1M2 LINE L1 4911 5322 -821 3 1098 226 336 36 0 chrX 67273357 67273497 -99376799 + L1M2 LINE L1 5406 5550 -750 3 1098 614 268 47 57 chrX 67273514 67273789 -99376507 + Lx8 LINE L1 6884 7289 -355 3 1098 2572 258 56 43 chrX 67273817 67274588 -99375708 + RMER1C Other Other 450 1213 -129 3 1098 557 275 47 6 chrX 67274690 67274883 -99375413 + L1M2 LINE L1 5572 5782 -518 3 1098 1210 272 138 40 chrX 67274889 67275391 -99374905 + Lx8 LINE L1 6317 6867 -606 3 1098 334 304 19 19 chrX 67275765 67275869 -99374427 + Lx8 LINE L1 7102 7205 -268 3 1098 3083 158 0 8 chrX 67276314 67276823 -99373473 - Lx2B LINE L1 -3 6997 6493 3 1098 30 27 0 0 chrX 67277107 67277144 -99373152 + AT_rich Low_complexity Low_complexity 1 37 0 3 1098 518 102 112 11 chrX 67277158 67277247 -99373049 - B2_Mm2 SINE B2 -86 109 12 3 1098 784 157 88 0 chrX 67277256 67277403 -99372893 - B2_Mm2 SINE B2 -35 160 1 3 1098 438 280 141 41 chrX 67277703 67278065 -99372231 - L1MC1 LINE L1 -128 6205 5808 3 1098 235 173 19 0 chrX 67278094 67278146 -99372150 - Lx8 LINE L1 -8 7465 7413 3 1098 585 219 22 22 chrX 67278526 67278708 -99371588 - L1MA4 LINE L1 -398 5902 5721 3 1098 320 286 72 55 chrX 67278705 67278886 -99371410 - L1MC1 LINE L1 -506 5827 5644 3 1098 306 0 0 0 chrX 67278908 67278942 -99371354 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1098 1307 287 86 54 chrX 67279031 67279919 -99370377 - L1MC1 LINE L1 -1125 5021 4106 3 1098 1995 173 27 11 chrX 67279930 67280298 -99369998 - MTC-int LTR MaLR -751 507 134 3 1098 299 130 0 0 chrX 67280434 67280488 -99369808 + Lx4A LINE L1 7002 7055 -3 3 1098 180 0 0 0 chrX 67281507 67281527 -99368769 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1098 667 290 6 30 chrX 67281601 67281768 -99368528 - B4A SINE B4 -80 212 50 3 1098 2346 192 5 5 chrX 67281772 67282185 -99368111 - MTC LTR MaLR -8 413 1 3 1098 5818 160 83 25 chrX 67282187 67283372 -99366924 - MTC-int LTR MaLR -2 1256 3 3 1098 1850 175 33 6 chrX 67283373 67283706 -99366590 - MTC LTR MaLR 0 421 80 3 1098 21 0 0 0 chrX 67283818 67283839 -99366457 + AT_rich Low_complexity Low_complexity 1 21 0 3 1098 263 194 14 43 chrX 67283876 67283946 -99366350 - Lx7 LINE L1 -1879 5817 5750 3 1098 474 18 0 0 chrX 67284044 67284099 -99366197 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 1098 44 0 0 0 chrX 67284138 67284182 -99366114 + AT_rich Low_complexity Low_complexity 1 44 0 3 1098 3130 71 0 8 chrX 67284186 67284585 -99365711 - MTA_Mm LTR MaLR 0 396 1 3 1098 7513 82 7 59 chrX 67284585 67285743 -99364553 - MTA_Mm-int LTR MaLR 0 1098 1 3 1098 2830 82 25 8 chrX 67285743 67286136 -99364160 - MTA_Mm LTR MaLR 0 400 1 3 1098 2545 249 121 43 chrX 67286160 67287123 -99363173 + Lx9 LINE L1 6418 7455 -189 3 1098 324 83 0 0 chrX 67287125 67287173 -99363123 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1098 270 0 0 0 chrX 67287173 67287202 -99363094 + (GA)n Simple_repeat Simple_repeat 1 30 0 3 1098 3730 98 9 8 chrX 67287218 67287752 -99362544 + L1_Mus1 LINE L1 6032 6566 -1 3 1098 248 222 50 10 chrX 67287857 67287957 -99362339 + Lx9 LINE L1 7534 7637 -7 3 1098 552 214 48 0 chrX 67287959 67288062 -99362234 + B1_Mur2 SINE Alu 2 109 -40 3 1098 315 0 0 0 chrX 67288064 67288099 -99362197 + (TC)n Simple_repeat Simple_repeat 1 35 0 3 1098 1019 296 22 19 chrX 67288111 67288480 -99361816 + Lx8 LINE L1 6197 6566 -907 3 1098 454 322 80 27 chrX 67288629 67288891 -99361405 - L2 LINE L2 -1242 2177 1902 3 1098 268 263 102 6 chrX 67288957 67289114 -99361182 + L1M4 LINE L1 3742 3913 -2233 3 1098 274 313 49 49 chrX 67289151 67289343 -99360953 - MLT1A0 LTR MaLR 0 374 195 3 1098 2986 165 88 27 chrX 67289369 67289948 -99360348 - L1_Mur2 LINE L1 -530 5347 4732 3 1098 270 56 0 0 chrX 67289948 67289984 -99360312 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 1098 2986 165 88 27 chrX 67289984 67290077 -99360219 - L1_Mur2 LINE L1 -1146 4731 4636 3 1098 7422 91 1 6 chrX 67290075 67291375 -99358921 + L1_Mus4 LINE L1 5341 6635 -1 3 1098 294 297 35 21 chrX 67291521 67291662 -99358634 + L1M4 LINE L1 3940 4082 -2064 3 1098 1170 68 0 0 chrX 67291715 67291861 -99358435 + B1_Mm SINE Alu 2 147 0 3 1098 375 154 0 0 chrX 67291861 67291926 -99358370 + A-rich Low_complexity Low_complexity 1 65 0 3 1098 1035 238 67 5 chrX 67291926 67292327 -99357969 + L1M4 LINE L1 4151 4576 -1570 3 1098 434 359 97 30 chrX 67292357 67292696 -99357600 - L1MD LINE L1 -1744 4402 4041 3 1098 283 300 84 36 chrX 67292980 67293063 -99357233 + PB1D10 SINE Alu 2 88 -29 3 1098 283 290 43 0 chrX 67293084 67293177 -99357119 + GA-rich Low_complexity Low_complexity 4 100 0 3 1098 244 342 43 17 chrX 67293184 67293300 -99356996 - ORR1E LTR MaLR -227 132 14 3 1098 353 338 45 23 chrX 67293439 67293572 -99356724 + RSINE1 SINE B4 2 137 -28 3 1098 243 0 0 0 chrX 67293586 67293613 -99356683 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 1098 602 314 102 37 chrX 67293739 67294137 -99356159 - L1MD LINE L1 -2839 3307 2866 3 1098 2873 33 0 3 chrX 67294137 67294475 -99355821 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1098 602 312 100 25 chrX 67294475 67294880 -99355416 - L1MD LINE L1 -3280 2866 2426 3 1098 6461 43 13 0 chrX 67294883 67295670 -99354626 - L1Md_F2 LINE L1 -14 6568 5772 3 1098 2173 149 34 21 chrX 67295683 67296101 -99354195 - RLTR31_Mm LTR ERVK -138 423 1 3 1098 5744 215 60 78 chrX 67296108 67298672 -99351624 - RMER3D-int LTR ERVK -7 2835 1 3 1098 401 191 156 21 chrX 67298672 67298768 -99351528 - RLTR31_Mm LTR ERVK 0 692 584 3 1098 1452 157 32 64 chrX 67298768 67299081 -99351215 + RMER1C Other Other 924 1226 -116 3 1098 263 179 45 0 chrX 67299073 67299140 -99351156 - L1M3 LINE L1 -1477 4663 4594 3 1098 443 322 32 24 chrX 67299243 67299367 -99350929 - RSINE1 SINE B4 -39 126 2 3 1098 354 336 48 24 chrX 67299468 67299593 -99350703 + B1F SINE Alu 15 142 -7 3 1098 269 270 20 0 chrX 67299785 67299885 -99350411 + L1ME3B LINE L1 4507 4608 -1538 3 1098 305 149 15 0 chrX 67300591 67300658 -99349638 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 1098 1083 96 7 0 chrX 67300939 67301085 -99349211 + B1_Mus1 SINE Alu 1 147 -1 3 1098 279 0 0 0 chrX 67301085 67301116 -99349180 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1098 248 345 86 26 chrX 67301230 67301346 -99348950 + LTR16B1 LTR ERVL 315 437 -43 3 1098 1210 284 45 20 chrX 67301419 67301774 -99348522 - ORR1D2 LTR MaLR -2 368 5 3 1098 327 320 108 23 chrX 67301798 67301974 -99348322 + L1ME3B LINE L1 5611 5801 -439 3 1098 6543 123 22 27 chrX 67302065 67303725 -99346571 + L1_Mus4 LINE L1 4970 6630 -6 3 1098 346 340 97 40 chrX 67303740 67304092 -99346204 + L1ME3B LINE L1 5815 6186 -54 3 1098 266 267 33 132 chrX 67304470 67304591 -99345705 - PB1D10 SINE Alu 0 117 9 3 1098 404 340 6 76 chrX 67304499 67304671 -99345625 - ID_B1 SINE B4 -54 170 11 3 1098 229 271 28 14 chrX 67305016 67305087 -99345209 - MIR SINE MIR -73 189 118 3 1098 346 362 32 36 chrX 67305456 67305536 -99344760 + L1MCa LINE L1 1409 1487 -5021 3 1098 1169 244 92 44 chrX 67305536 67305896 -99344400 + MTE2a LTR MaLR 3 379 0 3 1098 346 363 31 38 chrX 67305896 67306151 -99344145 + L1MCa LINE L1 1488 1837 -4580 3 1098 313 301 120 39 chrX 67306321 67306838 -99343458 + L1MA5 LINE L1 2562 3118 -2729 3 1098 392 269 73 63 chrX 67306881 67307348 -99342948 + L1MA5 LINE L1 4960 5430 -870 3 1098 506 257 62 0 chrX 67307500 67307710 -99342586 + L1MA5 LINE L1 5709 5931 -369 3 1098 536 65 13 0 chrX 67307712 67307789 -99342507 + (TG)n Simple_repeat Simple_repeat 2 79 0 3 1098 551 255 0 28 chrX 67308329 67308474 -99341822 + B1_Mus2 SINE Alu 1 141 -6 3 1098 33783 35 0 0 chrX 67308484 67314112 -99336184 + L1Md_T LINE L1 2 5588 -298 3 1098 9056 4 0 0 chrX 67314113 67315109 -99335187 + L1Md_T LINE L1 5590 6585 0 3 1098 23 33 0 0 chrX 67315133 67315163 -99335133 + AT_rich Low_complexity Low_complexity 1 30 0 3 1098 347 310 54 45 chrX 67315168 67315386 -99334910 - MER90 LTR ERV1 -315 299 3 3 1098 342 210 129 10 chrX 67315515 67315616 -99334680 - Lx5 LINE L1 -813 6237 6125 3 1098 4354 165 56 1 chrX 67315617 67316380 -99333916 + Lx5 LINE L1 6245 7049 -1 3 1098 795 279 100 13 chrX 67316390 67316771 -99333525 - L1MA6 LINE L1 -29 6271 5858 3 1098 4410 193 54 15 chrX 67316779 67317638 -99332658 - MTC-int LTR MaLR -162 1096 205 3 1098 432 0 0 0 chrX 67317905 67317953 -99332343 + (TAGA)n Simple_repeat Simple_repeat 4 51 0 4 1098 1870 169 46 72 chrX 67317974 67318168 -99332128 + ORR1C2 LTR MaLR 1 177 -207 4 1098 681 24 0 0 chrX 67318168 67318251 -99332045 + (TCTA)n Simple_repeat Simple_repeat 2 84 0 4 1098 1870 169 46 72 chrX 67318251 67318446 -99331850 + ORR1C2 LTR MaLR 178 380 -4 4 1098 405 0 0 0 chrX 67318534 67318579 -99331717 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 1098 5445 39 4 1 chrX 67318581 67319277 -99331019 - L1Md_F3 LINE L1 -25 6559 5862 4 1098 39135 12 2 6 chrX 67319275 67325886 -99324410 - L1Md_A LINE L1 0 6582 1 4 1098 1380 18 0 0 chrX 67325889 67326057 -99324239 - L1Md_F3 LINE L1 -707 5877 5710 4 1098 9517 91 9 13 chrX 67326052 67328191 -99322105 - L1Md_A LINE L1 -3337 2546 420 4 1098 1164 307 57 19 chrX 67328211 67328689 -99321607 + Lx8 LINE L1 6298 6793 -680 4 1098 235 233 11 23 chrX 67329011 67329099 -99321197 + CT-rich Low_complexity Low_complexity 3 89 0 4 1098 381 300 62 32 chrX 67329330 67329531 -99320765 + MIRb SINE MIR 26 241 -27 4 1098 1545 239 38 65 chrX 67330519 67331070 -99319226 + Lx7 LINE L1 7161 7696 0 4 1098 621 72 0 0 chrX 67331089 67331172 -99319124 + (GAGAA)n Simple_repeat Simple_repeat 3 85 0 4 1098 21 57 0 0 chrX 67332304 67332339 -99317957 + AT_rich Low_complexity Low_complexity 1 35 0 4 1098 234 340 52 0 chrX 67332496 67332593 -99317703 + MIR SINE MIR 30 131 -77 4 1098 797 250 188 14 chrX 67332814 67333037 -99317259 + MTD LTR MaLR 1 262 -157 4 1098 4678 183 30 24 chrX 67333050 67333197 -99317099 - L1_Mur2 LINE L1 -374 5503 5357 4 1098 2176 50 49 18 chrX 67333197 67333481 -99316815 - L1_Mus1 LINE L1 0 6567 6275 4 1098 4678 183 30 24 chrX 67333481 67333670 -99316626 - L1_Mur2 LINE L1 -521 5356 5159 4 1098 2751 157 105 66 chrX 67333670 67334334 -99315962 + RMER6C LTR ERVK 1 690 0 4 1098 4678 183 30 24 chrX 67334334 67334557 -99315739 - L1_Mur2 LINE L1 -719 5158 4935 4 1098 1124 216 55 120 chrX 67334557 67334910 -99315386 + RLTR31_Mm LTR ERVK 1 321 -240 4 1098 657 69 0 0 chrX 67334910 67334997 -99315299 + (TA)n Simple_repeat Simple_repeat 2 88 0 4 1098 1124 216 55 120 chrX 67334997 67335243 -99315053 + RLTR31_Mm LTR ERVK 322 560 -1 4 1098 4678 183 30 24 chrX 67335243 67335771 -99314525 - L1_Mur2 LINE L1 -943 4934 4409 4 1098 2317 284 84 87 chrX 67335792 67336913 -99313383 + Lx5 LINE L1 5964 7460 0 4 1098 232 315 74 6 chrX 67339020 67339183 -99311113 + Charlie4 DNA MER1_type 1744 1917 -44 4 1098 349 333 1 1 chrX 67339335 67339424 -99310872 - RSINE1 SINE B4 -204 88 1 4 1098 23 0 0 0 chrX 67339887 67339910 -99310386 + AT_rich Low_complexity Low_complexity 1 23 0 4 1098 229 320 131 3 chrX 67340143 67340310 -99309986 - MIRb SINE MIR -90 186 2 4 1098 465 133 36 29 chrX 67340315 67340454 -99309842 + CT-rich Low_complexity Low_complexity 2 141 0 4 1098 203 304 89 0 chrX 67343295 67343374 -99306922 - MIRb SINE MIR -66 202 117 4 1098 277 234 23 58 chrX 67343462 67343548 -99306748 + MER53 DNA hAT 111 193 0 4 1098 814 238 92 77 chrX 67343819 67344204 -99306092 - RMER16 LTR ERVK 0 533 18 4 1098 843 286 27 35 chrX 67344579 67344836 -99305460 + MLT2B1 LTR ERVL 9 263 -257 4 1098 243 309 45 55 chrX 67344874 67344899 -99305397 + ID SINE ID 60 81 -143 4 1098 215 341 90 45 chrX 67344899 67344988 -99305308 + B1_Mm SINE Alu 1 93 -54 4 1098 432 55 0 0 chrX 67345002 67345057 -99305239 + (TAA)n Simple_repeat Simple_repeat 3 57 0 4 1098 444 323 89 67 chrX 67345059 67345328 -99304968 + B4A SINE B4 2 276 -16 4 1098 191 400 0 0 chrX 67345541 67345611 -99304685 + MIRc SINE MIR 92 161 -107 4 1098 669 25 0 0 chrX 67346751 67346830 -99303466 + (TC)n Simple_repeat Simple_repeat 2 80 0 4 1098 214 380 86 0 chrX 67350361 67350548 -99299748 + L3 LINE CR1 3997 4199 -290 4 1098 509 57 0 0 chrX 67351256 67351326 -99298970 + L1_Mus2 LINE L1 6497 6566 0 4 1098 305 343 20 0 chrX 67352155 67352254 -99298042 - MER102c DNA MER1_type -11 320 220 4 1098 703 387 48 19 chrX 67352386 67352860 -99297436 - L4 LINE RTE -203 1826 1339 4 1098 191 323 31 0 chrX 67352932 67352997 -99297299 - L4 LINE RTE -854 1175 1109 4 1098 610 312 113 14 chrX 67353085 67353368 -99296928 + L2 LINE L2 2287 2597 -822 4 1098 21 0 0 0 chrX 67353698 67353719 -99296577 + AT_rich Low_complexity Low_complexity 1 21 0 4 1098 839 348 49 42 chrX 67354093 67354498 -99295798 - L2 LINE L2 -388 3031 2624 4 1098 502 280 110 21 chrX 67354644 67355016 -99295280 + L1MD LINE L1 4401 4805 -1341 4 1098 351 293 97 8 chrX 67355029 67355163 -99295133 + L1MD LINE L1 3805 3950 -2196 4 1098 268 286 92 38 chrX 67355200 67355570 -99294726 + L1MD LINE L1 4891 5280 -866 4 1098 227 312 10 20 chrX 67355574 67355672 -99294624 + ID_B1 SINE B4 79 175 -49 4 1098 317 283 20 20 chrX 67355584 67355685 -99294611 + PB1D10 SINE Alu 9 109 -8 4 1098 357 24 0 0 chrX 67355686 67355728 -99294568 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1098 318 26 0 0 chrX 67355728 67355767 -99294529 + (CCA)n Simple_repeat Simple_repeat 3 41 0 4 1098 309 284 47 16 chrX 67355833 67355962 -99294334 + L1MD LINE L1 5364 5496 -863 4 1098 398 73 0 0 chrX 67356013 67356068 -99294228 + B1_Mus2 SINE Alu 1 55 -92 4 1098 180 143 0 0 chrX 67356108 67356150 -99294146 + (TTTTTG)n Simple_repeat Simple_repeat 3 44 0 4 1098 615 161 0 0 chrX 67356150 67356262 -99294034 - L1_Mur2 LINE L1 -1133 4744 4633 4 1098 399 56 0 0 chrX 67356278 67356332 -99293964 + (TTGG)n Simple_repeat Simple_repeat 2 55 0 4 1098 8001 30 3 1 chrX 67356332 67357674 -99292622 - L1Md_T LINE L1 -1 6581 5236 4 1098 2070 129 0 75 chrX 67357659 67358087 -99292209 - L1_Mur2 LINE L1 -1248 4629 4234 4 1098 3103 116 42 2 chrX 67358085 67358588 -99291708 + Lx5 LINE L1 5613 6135 -915 4 1098 2978 172 9 0 chrX 67358606 67359145 -99291151 + Lx5 LINE L1 6174 6717 -333 4 1098 762 241 35 5 chrX 67359139 67359339 -99290957 + Lx5 LINE L1 6845 7050 0 4 1098 260 268 0 0 chrX 67359384 67359466 -99290830 + L1MD LINE L1 5600 5681 -678 4 1098 1220 90 11 0 chrX 67359476 67359653 -99290643 + L1_Mus3 LINE L1 6454 6632 -6 4 1098 3547 52 0 0 chrX 67359661 67360123 -99290173 + L1Md_F3 LINE L1 5125 5586 -297 4 1098 7910 44 11 0 chrX 67360123 67361096 -99289200 + L1Md_F3 LINE L1 5587 6570 -14 4 1098 252 204 0 0 chrX 67361098 67361142 -99289154 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1098 262 227 26 66 chrX 67361153 67361287 -99289009 - Tigger7 DNA MER2_type -109 2382 2250 4 1098 901 246 89 184 chrX 67361334 67361605 -99288691 - MTD LTR MaLR 0 419 217 4 1098 1584 42 5 0 chrX 67361605 67361795 -99288501 - B2_Mm1t SINE B2 -1 192 2 4 1098 901 246 89 184 chrX 67361795 67361810 -99288486 - MTD LTR MaLR -203 216 210 4 1098 2635 7 0 0 chrX 67361810 67362104 -99288192 - L1Md_A LINE L1 0 6582 6289 4 1098 901 246 89 184 chrX 67362104 67362279 -99288017 - MTD LTR MaLR -210 209 1 4 1098 340 318 65 25 chrX 67362279 67362479 -99287817 + L1ME2 LINE L1 5763 5970 -194 4 1098 1360 299 38 37 chrX 67363767 67364502 -99285794 - RMER1C Other Other -431 911 375 4 1098 221 331 66 88 chrX 67364701 67364837 -99285459 - MIR SINE MIR -134 134 2 4 1098 260 175 53 0 chrX 67365030 67365082 -99285214 - MTE2a LTR MaLR 0 379 325 4 1098 536 309 16 0 chrX 67365082 67365208 -99285088 + RSINE1 SINE B4 2 129 -36 4 1098 360 0 0 0 chrX 67365215 67365255 -99285041 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1098 453 274 68 68 chrX 67365274 67365450 -99284846 - MTE2a LTR MaLR -26 353 178 4 1098 435 256 95 8 chrX 67365476 67365602 -99284694 - L1M2 LINE L1 -526 5774 5638 4 1098 446 206 90 0 chrX 67365709 67365861 -99284435 - L1M2 LINE L1 -694 5489 5326 4 1098 1863 23 0 5 chrX 67365861 67366083 -99284213 - L1Md_F2 LINE L1 -9 6573 6353 4 1098 6591 87 3 1 chrX 67366278 67367168 -99283128 - L1_Mus3 LINE L1 -7 6631 5740 4 1098 371 310 19 13 chrX 67367170 67367327 -99282969 + L1MC1 LINE L1 6069 6226 -107 4 137 25658 90 3 6 chrX 67367322 67371800 -99278496 + L1_Mus2 LINE L1 2087 6551 -15 4 1099 360 0 0 0 chrX 67371803 67371843 -99278453 + (TAA)n Simple_repeat Simple_repeat 3 42 0 4 1099 2069 142 36 25 chrX 67371843 67372314 -99277982 - L1_Mur3 LINE L1 -2356 3524 3049 4 1099 1135 199 46 85 chrX 67372298 67372821 -99277475 - L1_Mur3 LINE L1 -4316 1564 1064 4 1099 264 40 60 0 chrX 67372864 67372914 -99277382 + (TTG)n Simple_repeat Simple_repeat 2 54 0 4 1099 2358 22 25 0 chrX 67372914 67373189 -99277107 - L1Md_F2 LINE L1 -18 6564 6283 4 1099 5785 82 5 1 chrX 67373589 67374371 -99275925 - L1_Mus2 LINE L1 0 6566 5782 4 1099 1033 312 86 15 chrX 67375957 67376642 -99273654 + L1_Mur3 LINE L1 3 743 -6969 4 1099 418 231 48 0 chrX 67376663 67376810 -99273486 + L1_Mur3 LINE L1 845 998 -6714 4 1099 1929 25 8 63 chrX 67376813 67377068 -99273228 + L1Md_F2 LINE L1 6330 6570 -12 4 1099 369 0 0 0 chrX 67379009 67379050 -99271246 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 4 1099 204 40 0 0 chrX 67379050 67379074 -99271222 + (TATG)n Simple_repeat Simple_repeat 2 26 0 4 1099 1058 75 20 0 chrX 67379078 67379225 -99271071 - B2_Mm2 SINE B2 -45 150 1 4 1099 193 297 0 73 chrX 67379247 67379356 -99270940 + L2c LINE L2 3043 3143 -244 4 1099 243 0 0 0 chrX 67379619 67379646 -99270650 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1099 438 191 202 0 chrX 67379659 67379827 -99270469 + Lx9 LINE L1 7443 7644 0 4 1099 27 0 0 0 chrX 67379827 67379854 -99270442 + AT_rich Low_complexity Low_complexity 1 27 0 4 1099 3181 65 2 2 chrX 67379873 67380273 -99270023 - MTB LTR MaLR 0 400 1 4 1099 488 325 62 8 chrX 67380740 67380909 -99269387 - MLT1J1 LTR MaLR -337 212 1 4 1099 1645 181 87 87 chrX 67380997 67381529 -99268767 - L1_Rod LINE L1 -64 5783 5252 4 1099 505 248 6 31 chrX 67381541 67381704 -99268592 + Lx9 LINE L1 5839 5989 -1655 4 1099 225 349 25 70 chrX 67381810 67381967 -99268329 + RMER12 LTR ERVK 699 848 -474 4 1099 2150 285 93 33 chrX 67381990 67382347 -99267949 + Lx9 LINE L1 6419 6802 -842 4 1099 3245 29 147 2 chrX 67382347 67382762 -99267534 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1099 2150 281 138 23 chrX 67382762 67383444 -99266852 + Lx9 LINE L1 6660 7597 -47 4 1099 3533 244 113 20 chrX 67383531 67384718 -99265578 + Lx9 LINE L1 6328 7624 -20 4 1099 214 179 42 10 chrX 67384806 67384902 -99265394 + T-rich Low_complexity Low_complexity 2 100 0 4 1099 34 24 0 0 chrX 67384924 67384965 -99265331 + AT_rich Low_complexity Low_complexity 1 41 0 4 1099 326 223 129 24 chrX 67385739 67385863 -99264433 + L1MCa LINE L1 1823 1959 -4549 4 1099 873 293 112 31 chrX 67386054 67386403 -99263893 - MLT1B LTR MaLR -13 377 1 4 1099 387 0 0 0 chrX 67386514 67386557 -99263739 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1099 555 16 0 0 chrX 67386558 67386622 -99263674 + (GA)n Simple_repeat Simple_repeat 2 65 0 4 1099 371 341 58 29 chrX 67387447 67387622 -99262674 - MIR SINE MIR -86 182 1 5 1099 195 292 120 40 chrX 67388632 67388707 -99261589 + MIRm SINE MIR 184 264 -12 5 1099 201 204 39 58 chrX 67388668 67388720 -99261576 + L2c LINE L2 3337 3387 0 5 1099 459 0 0 0 chrX 67389176 67389227 -99261069 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 1099 786 241 20 64 chrX 67389255 67389459 -99260837 + ORR1D1 LTR MaLR 180 374 0 5 1099 566 314 114 6 chrX 67389782 67389958 -99260338 + MLT1F2 LTR MaLR 366 560 0 5 1099 341 280 7 22 chrX 67390835 67390970 -99259326 + (TATG)n Simple_repeat Simple_repeat 1 133 0 5 1099 348 24 0 0 chrX 67391599 67391640 -99258656 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1099 773 291 42 12 chrX 67391766 67392006 -99258290 + MER2 DNA MER2_type 99 345 0 5 1099 215 283 0 48 chrX 67392064 67392127 -99258169 + MIR SINE MIR 201 260 -2 5 1099 300 300 88 30 chrX 67392764 67392902 -99257394 - MER5A DNA MER1_type -25 164 8 5 1099 225 278 131 20 chrX 67392959 67393058 -99257238 - MIRc SINE MIR -129 139 30 5 1099 238 331 16 16 chrX 67393503 67393629 -99256667 - CR1_Mam LINE CR1 -911 1293 1168 5 1099 872 296 76 10 chrX 67394094 67394408 -99255888 - MER2 DNA MER2_type -3 342 8 5 1099 353 244 0 0 chrX 67396009 67396091 -99254205 - MIR SINE MIR -5 257 176 5 1099 204 280 80 34 chrX 67396155 67396288 -99254008 - MIR SINE MIR -84 178 34 5 1099 393 224 39 23 chrX 67396938 67397066 -99253230 - Lx7 LINE L1 0 7696 7567 5 1099 348 234 0 0 chrX 67397100 67397194 -99253102 + (CA)n Simple_repeat Simple_repeat 2 95 0 5 1099 1699 201 67 8 chrX 67397231 67397587 -99252709 - Lx7 LINE L1 -337 7359 6983 5 1099 214 235 0 56 chrX 67397601 67397655 -99252641 - PB1 SINE Alu 0 127 77 5 1099 504 258 0 0 chrX 67401554 67401643 -99248653 + PB1D10 SINE Alu 2 90 -27 5 1099 1966 63 15 0 chrX 67401860 67402129 -99248167 - L1_Mus4 LINE L1 -1 6635 6363 5 1099 232 259 12 12 chrX 67402351 67402433 -99247863 - L1MB7 LINE L1 -67 6117 6036 5 1099 259 350 19 46 chrX 67402650 67402758 -99247538 + MLT1A0 LTR MaLR 3 107 -258 5 1099 242 375 0 0 chrX 67403086 67403158 -99247138 - ID4 SINE ID -6 77 6 5 1099 397 276 53 102 chrX 67403802 67404008 -99246288 + B3A SINE B2 2 197 -1 5 1099 938 108 13 6 chrX 67404430 67404589 -99245707 + L1_Mus3 LINE L1 6478 6637 -1 5 1099 584 254 53 58 chrX 67404659 67404984 -99245312 - L1M4 LINE L1 -962 5184 4858 5 1099 233 326 0 22 chrX 67404973 67405064 -99245232 + L1MC LINE L1 5709 5797 -2085 5 1099 217 279 0 0 chrX 67405213 67405256 -99245040 - L2a LINE L2 -31 3395 3353 5 1099 518 271 20 34 chrX 67405256 67405405 -99244891 + MLT2B3 LTR ERVL 1 147 -407 5 1099 289 295 66 82 chrX 67405376 67405498 -99244798 - RLTR25B LTR ERVK -468 560 441 5 1099 822 98 0 0 chrX 67405425 67405537 -99244759 - B1_Mm SINE Alu -35 112 1 5 1099 23 33 0 0 chrX 67405538 67405568 -99244728 + AT_rich Low_complexity Low_complexity 1 30 0 5 1099 432 273 16 8 chrX 67405607 67405729 -99244567 + Lx9 LINE L1 5850 5972 -1672 5 1099 1368 258 110 47 chrX 67406007 67406414 -99243882 - L1MA6 LINE L1 -69 6231 5797 5 1099 489 76 0 0 chrX 67406414 67406480 -99243816 + (TG)n Simple_repeat Simple_repeat 2 67 0 5 1099 1368 258 110 47 chrX 67406480 67406780 -99243516 - L1MA6 LINE L1 -504 5796 5479 5 1099 542 258 41 2 chrX 67406787 67406938 -99243358 - L1MA6 LINE L1 -1679 4204 4044 5 1099 231 143 95 0 chrX 67407376 67407418 -99242878 - B3 SINE B2 -141 75 30 5 1099 2331 138 19 0 chrX 67407418 67407880 -99242416 + L1VL4 LINE L1 252 864 -5471 5 1099 4214 55 40 3 chrX 67407885 67408488 -99241808 + MusHAL1 LINE L1 345 969 -1743 5 1099 6152 119 62 15 chrX 67408484 67409795 -99240501 + Lx2 LINE L1 5276 6645 -352 5 1099 1266 144 26 21 chrX 67409778 67410012 -99240284 + Lx2 LINE L1 6762 6996 -1 5 1099 23 0 0 0 chrX 67410868 67410891 -99239405 + AT_rich Low_complexity Low_complexity 1 23 0 5 1099 5597 54 10 0 chrX 67411156 67411862 -99238434 - L1Md_F2 LINE L1 0 6582 5870 5 1099 687 288 11 34 chrX 67412559 67412735 -99237561 + ID_B1 SINE B4 4 175 -49 5 1099 312 94 0 0 chrX 67412989 67413042 -99237254 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 1099 234 0 0 0 chrX 67413043 67413069 -99237227 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 1099 225 259 60 36 chrX 67413430 67413514 -99236782 + Lx6 LINE L1 7347 7432 -28 5 1099 377 249 110 3 chrX 67414058 67414199 -99236097 + Arthur1A DNA Tip100 19 175 -2 5 1099 8516 136 61 46 chrX 67417823 67419371 -99230925 - RLTR21 LTR ERVK 0 1572 1 5 1099 729 23 0 0 chrX 67420223 67420310 -99229986 + (TC)n Simple_repeat Simple_repeat 2 88 0 5 1099 1066 52 0 43 chrX 67420310 67420451 -99229845 - B1_Mm SINE Alu -12 135 1 5 1099 182 350 58 33 chrX 67421244 67421365 -99228931 - MIRb SINE MIR -31 237 114 5 1099 186 43 0 0 chrX 67422995 67423018 -99227278 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 5 1099 252 188 0 0 chrX 67423966 67424030 -99226266 + CT-rich Low_complexity Low_complexity 2 65 0 5 1099 300 264 40 11 chrX 67424045 67424155 -99226141 - MIRc SINE MIR -90 172 53 5 1099 347 372 43 21 chrX 67424241 67424428 -99225868 + MIRb SINE MIR 57 247 -21 5 1099 26 0 0 0 chrX 67424954 67424980 -99225316 + AT_rich Low_complexity Low_complexity 1 26 0 5 1099 25 0 0 0 chrX 67425329 67425354 -99224942 + AT_rich Low_complexity Low_complexity 1 25 0 5 1099 239 325 16 102 chrX 67427574 67427701 -99222595 - L2c LINE L2 -19 3368 3253 5 1099 609 247 17 45 chrX 67428253 67428431 -99221865 + MLT1E3 LTR MaLR 65 237 -387 5 1099 213 154 0 0 chrX 67428626 67428665 -99221631 + (TGGA)n Simple_repeat Simple_repeat 2 40 0 5 1099 22 0 0 0 chrX 67428921 67428943 -99221353 + AT_rich Low_complexity Low_complexity 1 22 0 5 1099 441 54 0 0 chrX 67429875 67429931 -99220365 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1099 513 232 226 0 chrX 67430589 67430757 -99219539 + B3 SINE B2 2 207 -9 5 1099 369 0 0 0 chrX 67431368 67431409 -99218887 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1099 413 132 109 36 chrX 67431411 67431521 -99218775 + Lx9 LINE L1 7517 7634 -10 5 1099 1796 104 58 0 chrX 67431696 67431956 -99218340 - L1_Mm LINE L1 -88 5795 5521 5 1099 1291 45 0 0 chrX 67431984 67432139 -99218157 - L1_Mus4 LINE L1 -894 5742 5588 5 1099 753 200 0 0 chrX 67432133 67432278 -99218018 + L1_Mur1 LINE L1 4942 5086 -800 5 1099 628 67 9 9 chrX 67432279 67432384 -99217912 + L1Md_F3 LINE L1 6479 6583 -1 5 1099 3483 119 6 0 chrX 67432415 67432934 -99217362 + L1_Mm LINE L1 5099 5620 -263 5 1099 5407 157 62 63 chrX 67433444 67434653 -99215643 + L1_Mur2 LINE L1 889 2048 -3829 5 1099 311 44 22 0 chrX 67434653 67434698 -99215598 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1099 5407 155 74 81 chrX 67434698 67434969 -99215327 + L1_Mur2 LINE L1 2049 2294 -3583 5 1099 893 175 54 16 chrX 67434969 67435155 -99215141 - B2_Mm2 SINE B2 -1 194 2 5 1099 5407 155 74 81 chrX 67435155 67435408 -99214888 + L1_Mur2 LINE L1 2295 2619 -3258 5 1099 3756 157 15 187 chrX 67435403 67435907 -99214389 + L1_Mur2 LINE L1 3983 4456 -1430 5 1099 1081 123 0 6 chrX 67435907 67436063 -99214233 - B2_Mm2 SINE B2 -37 158 4 5 1099 3756 157 15 187 chrX 67436063 67436250 -99214046 + L1_Mur2 LINE L1 4457 4633 -1253 5 1099 261 0 0 0 chrX 67436250 67436279 -99214017 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 1099 3756 157 15 187 chrX 67436279 67436554 -99213742 + L1_Mur2 LINE L1 4634 4911 -975 5 1099 29 28 0 0 chrX 67436574 67436610 -99213686 + AT_rich Low_complexity Low_complexity 1 36 0 5 1099 472 234 75 0 chrX 67436748 67436855 -99213441 + ID_B1 SINE B4 102 216 -8 5 1099 4454 32 0 4 chrX 67436957 67437512 -99212784 + L1Md_F3 LINE L1 6039 6584 0 5 1099 192 97 0 0 chrX 67439830 67439861 -99210435 + (TTATA)n Simple_repeat Simple_repeat 2 32 0 5 1099 297 0 0 0 chrX 67440166 67440199 -99210097 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1099 22 0 0 0 chrX 67440213 67440235 -99210061 + AT_rich Low_complexity Low_complexity 1 22 0 5 1099 29528 29 1 0 chrX 67440235 67444445 -99205851 - L1Md_T LINE L1 -2 6580 2366 5 1099 3946 49 16 4 chrX 67444443 67444954 -99205342 - L1Md_T LINE L1 -5616 1108 592 5 1099 538 349 26 0 chrX 67445065 67445257 -99205039 + Lx9 LINE L1 6553 6749 -895 5 1099 2792 69 25 0 chrX 67445253 67445613 -99204683 - L1_Mus2 LINE L1 -201 5682 5314 5 1099 4620 75 0 0 chrX 67445613 67446214 -99204082 + L1_Mus2 LINE L1 5651 6251 -315 5 1099 378 22 0 0 chrX 67446211 67446256 -99204040 - L1Md_F2 LINE L1 -75 5808 5764 5 1099 6179 54 1 6 chrX 67446256 67447042 -99203254 + L1Md_F2 LINE L1 5801 6582 0 5 1099 1267 302 88 27 chrX 67447082 67447408 -99202888 + Lx9 LINE L1 6803 7123 -521 5 1099 3672 18 121 0 chrX 67447408 67447848 -99202448 - MT2_Mm LTR ERVL 0 493 1 5 1099 1267 302 88 27 chrX 67447848 67448113 -99202183 + Lx9 LINE L1 7124 7430 -214 5 1099 579 112 0 0 chrX 67448138 67448245 -99202051 + (TA)n Simple_repeat Simple_repeat 2 108 0 5 1099 27 29 0 0 chrX 67448361 67448395 -99201901 + AT_rich Low_complexity Low_complexity 1 34 0 5 1099 369 327 129 14 chrX 67448540 67448757 -99201539 - L2 LINE L2 -585 2834 2593 5 1099 473 131 12 0 chrX 67449262 67449346 -99200950 + (TC)n Simple_repeat Simple_repeat 2 86 0 5 1099 974 265 32 0 chrX 67449608 67449827 -99200469 - ORR1D1 LTR MaLR -146 228 3 5 1099 1063 282 77 31 chrX 67449833 67450624 -99199672 - L1_Rod LINE L1 -3928 1958 1144 5 1099 234 62 0 0 chrX 67450737 67450769 -99199527 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 1099 27 49 0 0 chrX 67451617 67451658 -99198638 + AT_rich Low_complexity Low_complexity 1 41 0 5 1099 369 62 0 0 chrX 67452143 67452191 -99198105 + (CATA)n Simple_repeat Simple_repeat 2 49 0 5 1099 642 253 53 36 chrX 67452261 67452542 -99197754 + L1MA4 LINE L1 5665 5953 -203 5 1099 21 36 0 0 chrX 67452803 67452831 -99197465 + AT_rich Low_complexity Low_complexity 1 28 0 5 1099 1074 316 69 46 chrX 67453234 67453659 -99196637 + L1MC5 LINE L1 6616 7027 -934 5 1099 1156 68 0 13 chrX 67453659 67453809 -99196487 + B1_Mus1 SINE Alu 1 148 0 5 1099 1074 316 69 46 chrX 67453809 67454236 -99196060 + L1MC5 LINE L1 7028 7488 -473 5 1099 1214 27 7 0 chrX 67454265 67454414 -99195882 - L1Md_F3 LINE L1 -502 6082 5933 5 1099 4028 27 2 2 chrX 67454414 67454894 -99195402 + L1Md_F3 LINE L1 6104 6583 -1 5 1099 2193 85 10 0 chrX 67455360 67455667 -99194629 - L1_Mus3 LINE L1 -1 6637 6328 5 1099 192 40 0 0 chrX 67455667 67455692 -99194604 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 6 1099 2263 74 28 6 chrX 67455693 67456020 -99194276 - L1_Mus3 LINE L1 -15 6623 6290 6 1099 940 180 22 6 chrX 67456042 67456221 -99194075 + URR1B DNA MER1_type 42 223 -2 6 1099 1535 273 63 30 chrX 67456801 67456830 -99193466 + Lx8 LINE L1 6267 6293 -1180 6 1099 1256 146 13 56 chrX 67456830 67457062 -99193234 + URR1A DNA MER1_type 5 226 0 6 1099 1535 273 63 30 chrX 67457062 67457493 -99192803 + Lx8 LINE L1 6294 6742 -731 6 1099 1212 213 0 0 chrX 67457495 67457706 -99192590 + MERVK26-int LTR ERVK 6708 6918 -1 6 1099 834 236 89 44 chrX 67457874 67458145 -99192151 + RMER20B LTR ERVK 134 416 -211 6 1099 1830 261 95 16 chrX 67458264 67458832 -99191464 + Lx8 LINE L1 6729 7341 -132 6 1099 2523 62 22 0 chrX 67458861 67459181 -99191115 - ORR1A2 LTR MaLR 0 327 1 6 1099 6985 117 13 31 chrX 67459181 67459331 -99190965 - ORR1A2-int LTR MaLR 0 1963 1831 6 1099 1111 68 0 39 chrX 67459331 67459484 -99190812 + B1_Mus1 SINE Alu 2 148 0 6 1099 6985 117 13 31 chrX 67459484 67460436 -99189860 - ORR1A2-int LTR MaLR -133 1830 881 6 1099 2695 62 11 3 chrX 67460445 67460804 -99189492 - L1_Mus3 LINE L1 0 6638 6277 6 1099 7092 87 33 16 chrX 67460804 67462278 -99188018 + L1_Mus2 LINE L1 5076 6565 -1 6 1099 648 326 49 46 chrX 67462483 67462766 -99187530 - MLT1F LTR MaLR -242 337 6 6 1099 330 26 0 0 chrX 67463108 67463147 -99187149 + (TATAA)n Simple_repeat Simple_repeat 4 42 0 6 1099 347 299 15 45 chrX 67463475 67463608 -99186688 - MLT1A1 LTR MaLR -279 129 1 6 1099 232 314 18 78 chrX 67464602 67464768 -99185528 + MIRb SINE MIR 85 240 -28 6 1099 2863 252 86 67 chrX 67465382 67465436 -99184860 + Lx6 LINE L1 161 215 -7513 6 1099 866 84 14 14 chrX 67465436 67465580 -99184716 + (TTC)n Simple_repeat Simple_repeat 1 144 0 6 1099 2863 243 78 55 chrX 67465580 67466770 -99183526 + Lx6 LINE L1 216 1435 -4445 6 1099 841 146 0 18 chrX 67466772 67466939 -99183357 + GA-rich Low_complexity Low_complexity 2 165 0 6 1099 3728 198 41 28 chrX 67466956 67468276 -99182020 + Lx6 LINE L1 5086 6420 -1040 6 1099 235 368 0 0 chrX 67468518 67468594 -99181702 - MIRc SINE MIR -24 244 169 6 1099 314 279 11 23 chrX 67468636 67468724 -99181572 - PB1 SINE Alu -17 110 24 6 1099 693 36 0 0 chrX 67468807 67468891 -99181405 + (TC)n Simple_repeat Simple_repeat 1 84 0 6 1099 405 0 0 0 chrX 67468891 67468935 -99181361 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1099 1450 312 72 29 chrX 67469752 67470159 -99180137 + ERVL-int LTR ERVL 4302 4714 -1043 6 1099 246 32 0 0 chrX 67470159 67470190 -99180106 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1099 189 0 0 0 chrX 67470190 67470210 -99180086 + (GA)n Simple_repeat Simple_repeat 2 22 0 6 1099 1450 312 72 29 chrX 67470210 67470468 -99179828 + ERVL-int LTR ERVL 4715 4996 -761 6 1099 1577 268 54 12 chrX 67470502 67471061 -99179235 + ERVL-int LTR ERVL 5075 5656 -101 6 1099 6196 70 4 2 chrX 67471086 67471907 -99178389 + L1_Mus3 LINE L1 5816 6637 -1 6 1099 22 0 0 0 chrX 67472011 67472033 -99178263 + AT_rich Low_complexity Low_complexity 1 22 0 6 1099 215 286 89 62 chrX 67472516 67472628 -99177668 - MIRm SINE MIR -98 178 64 6 1099 274 269 95 21 chrX 67473008 67473103 -99177193 + PB1D10 SINE Alu 1 102 -15 6 1099 236 290 87 0 chrX 67474059 67474141 -99176155 - B4 SINE B4 -159 133 51 6 1099 7976 75 5 1 chrX 67474271 67476007 -99174289 - L1Md_F2 LINE L1 0 6582 4836 6 1099 360 177 0 0 chrX 67476005 67476067 -99174229 - L1Md_F LINE L1 -6365 154 93 6 1099 546 16 0 0 chrX 67476067 67476130 -99174166 + (TA)n Simple_repeat Simple_repeat 1 63 0 6 1099 295 0 0 0 chrX 67477467 67477510 -99172786 + L1Md_T LINE L1 6539 6581 -1 6 1099 655 346 0 11 chrX 67477528 67477718 -99172578 + B3A SINE B2 7 194 -4 6 1099 3880 188 84 36 chrX 67477724 67478555 -99171741 + Lx3_Mus LINE L1 3 1115 -5869 6 1099 1048 103 7 0 chrX 67478555 67478700 -99171596 + B1_Mus1 SINE Alu 3 148 0 6 1099 30445 80 41 31 chrX 67478700 67480244 -99170052 + Lx3_Mus LINE L1 1116 2647 -3239 6 1099 207 0 0 0 chrX 67480244 67480267 -99170029 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1099 30445 79 39 33 chrX 67480267 67482474 -99167822 + Lx3_Mus LINE L1 2648 4865 -1021 6 1099 2206 76 0 0 chrX 67482474 67482765 -99167531 - L1_Mus1 LINE L1 -1 6566 6276 6 1099 30445 85 49 27 chrX 67482765 67484165 -99166131 + Lx3_Mus LINE L1 4866 6303 -706 6 1099 433 278 157 28 chrX 67484491 67484669 -99165627 - B3 SINE B2 -15 201 1 6 1099 198 292 131 51 chrX 67485777 67485914 -99164382 + MIR3 SINE MIR 16 163 -45 6 1099 1318 254 55 48 chrX 67486525 67486946 -99163350 + L1MA4A LINE L1 5422 5850 -453 6 1099 3372 65 9 0 chrX 67486946 67487380 -99162916 - L1_Mus1 LINE L1 0 6567 6130 6 1099 1318 254 55 48 chrX 67487380 67487463 -99162833 + L1MA4A LINE L1 5851 5930 -373 6 1099 22 35 0 0 chrX 67487937 67487966 -99162330 + AT_rich Low_complexity Low_complexity 1 29 0 6 1099 1053 261 60 74 chrX 67488729 67489093 -99161203 - ORR1E LTR MaLR 0 359 1 6 1099 1996 215 18 114 chrX 67489560 67490236 -99160060 - RMER19C LTR ERVK 0 611 1 6 1099 243 306 77 57 chrX 67490577 67490771 -99159525 - RMER20B LTR ERVK -2 514 317 6 1099 596 257 10 96 chrX 67490846 67491044 -99159252 - RMER20B LTR ERVK -446 181 1 6 1099 23 68 0 0 chrX 67491199 67491243 -99159053 + AT_rich Low_complexity Low_complexity 1 44 0 6 1099 3995 177 67 29 chrX 67491257 67491514 -99158782 + RMER19B LTR ERVK 1 247 -655 6 1099 201 39 0 0 chrX 67491514 67491540 -99158756 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 1099 3995 177 67 29 chrX 67491540 67492099 -99158197 + RMER19B LTR ERVK 248 848 -54 6 1099 236 333 0 14 chrX 67492117 67492190 -99158106 + ID4_ SINE ID 4 75 -8 6 1099 272 344 135 31 chrX 67493009 67493201 -99157095 + MIR SINE MIR 41 252 -10 6 1099 841 124 7 14 chrX 67494356 67494495 -99155801 + MTD LTR MaLR 1 138 -281 6 1099 3122 298 89 13 chrX 67494498 67495600 -99154696 + Lx8 LINE L1 6114 7299 -174 6 1099 1141 82 0 0 chrX 67495609 67495756 -99154540 - B1_Mus1 SINE Alu 0 148 2 6 1099 480 270 0 113 chrX 67495813 67495955 -99154341 - B3 SINE B2 -7 209 84 6 1099 1013 277 94 8 chrX 67496246 67496501 -99153795 - MTE2b LTR MaLR -99 280 4 6 1099 994 309 82 62 chrX 67496510 67497869 -99152427 + L1MA6 LINE L1 4484 5908 -392 6 1099 360 77 0 0 chrX 67497903 67497955 -99152341 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1099 24 32 0 0 chrX 67498152 67498183 -99152113 + AT_rich Low_complexity Low_complexity 1 31 0 6 1099 519 319 33 15 chrX 67498268 67498538 -99151758 + L1M2 LINE L1 3448 3722 -2421 6 1099 254 237 13 13 chrX 67498530 67498607 -99151689 + L1_Rod LINE L1 5532 5608 -239 6 1099 612 109 134 0 chrX 67498632 67498751 -99151545 + Lx LINE L1 6514 6648 -6 6 1099 869 329 42 50 chrX 67498783 67499641 -99150655 + L1_Mur3 LINE L1 4751 5601 -279 6 1099 244 188 78 0 chrX 67499676 67499740 -99150556 + L1M2 LINE L1 5709 5777 -514 6 1099 341 227 216 0 chrX 67499749 67499837 -99150459 + B3 SINE B2 5 111 -105 6 1099 986 66 0 44 chrX 67499842 67500000 -99150296 - L1Md_F2 LINE L1 0 6582 6432 6 137 38746 49 0 3 chrX 67500003 67506494 -99143802 - L1Md_T LINE L1 -155 6430 2 1 1100 7930 80 1 21 chrX 67506496 67507781 -99142515 - L1Md_Gf LINE L1 -4430 1456 92 2 1100 36023 70 1 1 chrX 67507780 67512934 -99137362 - L1Md_Gf LINE L1 -69 5817 563 3 1100 866 168 0 0 chrX 67512927 67513076 -99137220 - L1Md_Gf LINE L1 -6282 337 189 3 1100 573 226 9 9 chrX 67513078 67513194 -99137102 + B3 SINE B2 99 214 -2 4 1100 3326 17 0 0 chrX 67513196 67513553 -99136743 + L1Md_T LINE L1 6226 6582 0 5 1100 289 212 46 17 chrX 67513595 67513698 -99136598 + L1M1 LINE L1 5784 5886 -270 6 1100 300 338 0 35 chrX 67514266 67514380 -99135916 + PB1D7 SINE Alu 1 111 -9 7 1100 589 229 38 13 chrX 67514814 67514973 -99135323 + L1_Mur2 LINE L1 898 1060 -6026 8 1100 6217 84 68 2 chrX 67514973 67515796 -99134500 - L1_Mus3 LINE L1 -2 6636 5760 9 1100 3595 107 19 20 chrX 67515796 67516338 -99133958 + L1_Mus3 LINE L1 5217 5757 -126 9 1100 443 120 21 52 chrX 67516319 67516416 -99133880 + L1_Mur2 LINE L1 1038 1131 -5955 8 1100 1804 176 7 55 chrX 67516393 67516832 -99133464 + L1_Mur2 LINE L1 1258 1675 -4202 8 1100 330 70 0 0 chrX 67516831 67516874 -99133422 - L1_Mm LINE L1 -1122 4761 4719 1 1100 2447 79 0 0 chrX 67516882 67517200 -99133096 + L1_Mm LINE L1 4768 5085 -798 1 1100 644 68 0 0 chrX 67517197 67517285 -99133011 + L1_Mm LINE L1 3626 3713 -2170 1 1100 39387 6 0 1 chrX 67517286 67523051 -99127245 + L1Md_A LINE L1 1 5586 -297 1 1100 9586 5 0 0 chrX 67523051 67524047 -99126249 + L1Md_A LINE L1 5587 6582 0 1 1100 15063 61 6 1 chrX 67524058 67525940 -99124356 + L1_Mm LINE L1 3700 5586 -297 1 1100 8392 42 17 6 chrX 67525940 67526925 -99123371 + L1Md_F2 LINE L1 5587 6582 0 1 1100 15063 48 19 0 chrX 67526925 67527442 -99122854 + L1_Mm LINE L1 5070 5600 -283 1 1100 8554 48 3 1 chrX 67527442 67528433 -99121863 + L1Md_F2 LINE L1 5587 6579 -3 1 1100 8937 156 14 30 chrX 67528463 67530160 -99120136 + L1_Mur2 LINE L1 1665 3334 -2543 8 1100 864 145 57 6 chrX 67530160 67530318 -99119978 + L1_Mur2 LINE L1 5288 5488 -692 8 1100 938 94 58 45 chrX 67530320 67530476 -99119820 + B2_Mm2 SINE B2 1 158 -37 1 1100 4636 103 16 3 chrX 67530485 67531125 -99119171 + Lx3_Mus LINE L1 6359 7006 -3 1 1100 2670 159 14 20 chrX 67531133 67531543 -99118753 + Lx5 LINE L1 5428 5876 -1100 1 1100 240 262 24 130 chrX 67531553 67531608 -99118688 + MT2B2 LTR ERVL 175 222 -362 1 1100 1248 77 0 0 chrX 67531608 67531777 -99118519 + (GAAA)n Simple_repeat Simple_repeat 4 172 0 1 1100 485 176 89 36 chrX 67531777 67531823 -99118473 + PB1D9 SINE Alu 66 118 -2 2 1100 240 262 24 130 chrX 67531823 67531844 -99118452 + MT2B2 LTR ERVL 223 284 -300 2 1100 4436 197 58 14 chrX 67531844 67532686 -99117610 + Lx5 LINE L1 5877 6805 -171 1 1100 213 39 0 0 chrX 67532769 67532795 -99117501 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 2 1100 186 43 0 0 chrX 67532848 67532871 -99117425 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 2 1100 7693 62 3 8 chrX 67532884 67534236 -99116060 - L1Md_F2 LINE L1 -3 6579 5237 2 1100 6265 66 1 0 chrX 67534237 67535020 -99115276 + L1Md_F2 LINE L1 4474 5257 -626 2 1100 450 214 19 0 chrX 67535014 67535117 -99115179 + L1MC3 LINE L1 5572 5676 -2109 2 1100 508 236 8 31 chrX 67535107 67535213 -99115083 - Lx4B LINE L1 -792 6266 6163 2 1100 180 0 0 0 chrX 67535213 67535233 -99115063 + (CCCCCA)n Simple_repeat Simple_repeat 3 22 0 2 1100 508 236 8 31 chrX 67535233 67535253 -99115043 - Lx4B LINE L1 -896 6162 6143 2 1100 411 231 25 64 chrX 67535246 67535403 -99114893 + Lx4B LINE L1 6908 7058 0 2 1100 283 318 186 13 chrX 67535403 67535639 -99114657 + L1MC3 LINE L1 5661 5937 -2058 2 1100 309 53 0 0 chrX 67535640 67535678 -99114618 + tRNA-Ile-ATA tRNA tRNA 1 38 -39 2 1100 1279 296 111 34 chrX 67535685 67536443 -99113853 + L1MC3 LINE L1 5930 6745 -1040 2 1100 770 270 90 59 chrX 67536724 67537143 -99113153 - RMER13A LTR ERVK -410 498 22 3 1100 1450 286 115 15 chrX 67537235 67537959 -99112337 + L1MC3 LINE L1 6827 7622 -163 2 1100 1275 169 19 0 chrX 67538158 67538365 -99111931 - MTC LTR MaLR 0 421 211 3 1100 4151 40 0 2 chrX 67538365 67539015 -99111281 + L1Md_F2 LINE L1 5420 6068 -514 3 1100 365 271 39 19 chrX 67539015 67539169 -99111127 + L1MC3 LINE L1 7613 7769 -16 2 1100 652 312 16 0 chrX 67539522 67539711 -99110585 + MER3 DNA MER1_type 18 209 0 3 1100 230 192 39 0 chrX 67540743 67540795 -99109501 - L1MB8 LINE L1 0 6178 6125 3 1100 484 294 0 0 chrX 67540822 67540924 -99109372 - B3A SINE B2 -96 102 1 3 1100 5986 80 16 3 chrX 67541015 67541777 -99108519 - Lx3_Mus LINE L1 0 7009 6238 3 1100 5011 89 14 66 chrX 67541777 67541993 -99108303 + L1_Mus3 LINE L1 5030 5250 -636 3 1100 504 0 0 0 chrX 67541993 67542049 -99108247 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 1100 5508 126 19 60 chrX 67542049 67543513 -99106783 + L1_Mus3 LINE L1 5251 6634 -4 3 1100 1359 144 37 88 chrX 67543509 67543806 -99106490 + Lx3_Mus LINE L1 5783 6064 -945 3 1100 1640 70 51 0 chrX 67543803 67544017 -99106279 - L1_Mus4 LINE L1 -204 6432 6208 4 1100 886 46 9 0 chrX 67544011 67544120 -99106176 - L1_Mus4 LINE L1 -694 5942 5833 4 1100 298 328 43 119 chrX 67544120 67544299 -99105997 - MLT1D LTR MaLR -147 358 179 4 1100 7261 76 9 0 chrX 67544299 67545184 -99105112 - RLTR13B1 LTR ERVK 0 893 1 4 1100 298 328 43 119 chrX 67545184 67545197 -99105099 - MLT1D LTR MaLR -327 178 169 4 1100 962 144 217 0 chrX 67545197 67545377 -99104919 + URR1B DNA MER1_type 5 223 -2 4 1100 298 328 43 119 chrX 67545377 67545460 -99104836 - MLT1D LTR MaLR -337 168 103 4 1100 3628 67 7 2 chrX 67545460 67545933 -99104363 + L1Md_F3 LINE L1 5131 5586 -297 4 1100 8184 48 22 1 chrX 67545933 67546897 -99103399 + L1Md_F3 LINE L1 5587 6570 -14 4 1100 870 180 14 0 chrX 67546957 67547096 -99103200 - B1_Mur3 SINE Alu -8 141 1 4 1100 252 0 0 0 chrX 67547170 67547198 -99103098 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 4 1100 280 190 35 0 chrX 67547840 67547898 -99102398 + MIR SINE MIR 36 95 -113 4 1100 2197 145 32 16 chrX 67549192 67549564 -99100732 + MTB_Mm LTR MaLR 1 378 -29 4 1100 407 16 45 60 chrX 67549593 67549660 -99100636 - L1Md_F3 LINE L1 -1 6583 6518 4 1100 231 61 0 0 chrX 67549814 67549847 -99100449 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 5 1100 1138 70 0 27 chrX 67549847 67549989 -99100307 - B1_Mm SINE Alu -7 140 3 5 1100 261 344 11 53 chrX 67550382 67550477 -99099819 + ID_B1 SINE B4 99 189 -35 5 1100 388 165 154 16 chrX 67551128 67551251 -99099045 - Lx9 LINE L1 0 7644 7505 5 1100 216 0 0 0 chrX 67551254 67551278 -99099018 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 1100 415 323 124 18 chrX 67551627 67552021 -99098275 + L1MC4a LINE L1 7101 7536 -346 5 1100 329 246 94 94 chrX 67552187 67552349 -99097947 + L1MC4a LINE L1 7540 7708 -174 5 1100 2071 127 58 112 chrX 67552349 67552749 -99097547 - ORR1C1 LTR MaLR 0 378 1 5 1100 329 246 94 94 chrX 67552749 67552810 -99097486 + L1MC4a LINE L1 7709 7763 -119 5 1100 347 365 23 0 chrX 67552825 67552947 -99097349 + PB1D10 SINE Alu 1 124 -25 5 1100 264 30 0 0 chrX 67552948 67552981 -99097315 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1100 793 181 0 13 chrX 67553017 67553190 -99097106 + Lx3C LINE L1 5705 5837 -1139 5 1100 234 0 0 0 chrX 67553247 67553273 -99097023 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 6 1100 3006 57 3 0 chrX 67553283 67553636 -99096660 - L1_Mus1 LINE L1 -1 6566 6213 6 1100 8454 91 14 5 chrX 67553858 67555133 -99095163 + Lx3B LINE L1 5500 6783 -190 6 1100 234 0 0 0 chrX 67555171 67555197 -99095099 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1100 434 241 125 33 chrX 67555236 67555356 -99094940 - ID_B1 SINE B4 -10 214 84 6 1100 276 30 0 0 chrX 67555478 67555511 -99094785 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1100 259 282 133 17 chrX 67555514 67555694 -99094602 - L2a LINE L2 0 3426 3226 6 1100 35 54 0 0 chrX 67555758 67555814 -99094482 + AT_rich Low_complexity Low_complexity 1 56 0 6 1100 1010 227 10 5 chrX 67555934 67556138 -99094158 - B4A SINE B4 -85 207 3 6 1100 407 280 22 22 chrX 67556138 67556264 -99094032 + MLT1A1 LTR MaLR 283 408 0 6 1100 207 224 17 0 chrX 67556290 67556348 -99093948 + A-rich Low_complexity Low_complexity 1 59 0 7 1100 2303 69 6 59 chrX 67556748 67557085 -99093211 - ORR1A2 LTR MaLR -8 319 1 7 1100 1449 216 94 195 chrX 67557224 67558159 -99092137 + Lx9 LINE L1 1849 2689 -3158 7 1100 6011 255 78 55 chrX 67558160 67558450 -99091846 + Lx9 LINE L1 3290 3576 -2271 7 1100 549 139 48 32 chrX 67558450 67558576 -99091720 - Lx9 LINE L1 -1 7643 7516 7 1100 6011 245 82 62 chrX 67558576 67560808 -99089488 + Lx9 LINE L1 3577 5932 -359 7 1100 567 0 0 0 chrX 67560966 67561029 -99089267 + (GA)n Simple_repeat Simple_repeat 1 63 0 7 1100 704 178 265 6 chrX 67561097 67561267 -99089029 - URR1B DNA MER1_type -11 214 1 7 1100 1236 254 35 184 chrX 67561268 67561889 -99088407 + Lx9 LINE L1 6876 7404 -240 7 1100 516 59 0 0 chrX 67561889 67561957 -99088339 + (TG)n Simple_repeat Simple_repeat 1 68 0 7 1100 1696 215 10 8 chrX 67561969 67562287 -99088009 + Lx5 LINE L1 6667 6979 -71 7 1100 207 0 0 0 chrX 67562287 67562310 -99087986 + (TTG)n Simple_repeat Simple_repeat 2 24 0 7 1100 405 336 34 108 chrX 67562310 67562329 -99087967 + Lx5 LINE L1 7355 7356 -104 7 1100 1236 55 7 0 chrX 67562329 67562474 -99087822 - B1_Mus1 SINE Alu 0 148 3 7 1100 405 336 34 108 chrX 67562474 67562574 -99087722 + Lx5 LINE L1 7357 7456 -4 7 1100 31 68 0 0 chrX 67562597 67562656 -99087640 + AT_rich Low_complexity Low_complexity 1 59 0 8 1100 569 246 25 105 chrX 67563278 67563678 -99086618 - L1_Rod LINE L1 -415 5465 5114 8 1100 334 287 9 47 chrX 67563840 67563946 -99086350 + MTE-int LTR MaLR 300 401 -1179 8 1100 705 214 27 20 chrX 67563945 67564093 -99086203 + B3 SINE B2 58 206 -10 8 1100 3635 186 29 49 chrX 67564185 67564707 -99085589 + RMER1B Other Other 363 865 -201 8 1100 5985 155 31 25 chrX 67564707 67565693 -99084603 + Lx4B LINE L1 6067 7058 0 8 1100 3635 186 29 49 chrX 67565693 67565884 -99084412 + RMER1B Other Other 866 1062 -4 8 1100 1207 255 79 91 chrX 67565897 67566139 -99084157 + L1M2 LINE L1 4300 4544 -1599 8 1100 2714 115 79 8 chrX 67566139 67566532 -99083764 - MTC LTR MaLR 0 421 1 8 1100 1207 255 79 91 chrX 67566532 67566601 -99083695 + L1M2 LINE L1 4545 4609 -1534 8 1100 556 270 40 7 chrX 67566601 67566750 -99083546 + RSINE1 SINE B4 1 154 -11 8 1100 1207 255 79 91 chrX 67566750 67567128 -99083168 + L1M2 LINE L1 4610 4976 -1167 8 1100 183 42 0 0 chrX 67567128 67567152 -99083144 + (CA)n Simple_repeat Simple_repeat 1 24 0 8 1100 1207 255 79 91 chrX 67567152 67567198 -99083098 + L1M2 LINE L1 4977 5027 -1116 8 1100 681 13 0 0 chrX 67567380 67567458 -99082838 + (TG)n Simple_repeat Simple_repeat 2 79 0 9 1100 424 261 11 11 chrX 67569361 67569450 -99080846 + B4A SINE B4 3 91 -201 9 1100 342 200 42 10 chrX 67569454 67569550 -99080746 - Lx4B LINE L1 -861 6197 6099 9 1100 3162 211 13 5 chrX 67569561 67570285 -99080011 + Lx4B LINE L1 6024 6856 -144 9 1100 684 0 0 0 chrX 67570289 67570365 -99079931 + (GAAA)n Simple_repeat Simple_repeat 4 79 0 9 1100 1186 73 0 0 chrX 67570596 67570733 -99079563 + B1_Mus1 SINE Alu 2 138 -10 9 1100 987 109 0 0 chrX 67570733 67570880 -99079416 + (GAAA)n Simple_repeat Simple_repeat 2 148 0 9 1100 1151 99 0 6 chrX 67570882 67571055 -99079241 + (GGAAA)n Simple_repeat Simple_repeat 4 175 0 9 1100 393 245 0 0 chrX 67571058 67571160 -99079136 + GA-rich Low_complexity Low_complexity 1 102 0 9 1100 429 360 15 0 chrX 67571637 67571773 -99078523 + B1F1 SINE Alu 10 147 -2 9 1100 766 303 53 34 chrX 67573430 67573693 -99076603 + B4 SINE B4 3 270 -22 1 1100 363 78 0 0 chrX 67573694 67573745 -99076551 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1100 31 68 0 0 chrX 67574610 67574669 -99075627 + AT_rich Low_complexity Low_complexity 1 59 0 1 1100 651 309 58 58 chrX 67574715 67575076 -99075220 + Lx8 LINE L1 7111 7471 -2 1 1100 22 0 0 0 chrX 67575076 67575098 -99075198 + AT_rich Low_complexity Low_complexity 1 22 0 1 1100 4814 151 3 49 chrX 67575397 67576254 -99074042 + Lx4B LINE L1 4938 5755 -131 1 1100 2786 130 53 9 chrX 67576254 67576688 -99073608 - Lx2B LINE L1 -1 6999 6547 1 1100 7975 138 24 35 chrX 67576678 67577279 -99073017 + Lx4B LINE L1 5768 6348 -710 1 1100 1178 82 7 0 chrX 67577279 67577425 -99072871 - B1_Mus1 SINE Alu 0 148 2 1 1100 7975 138 24 35 chrX 67577425 67578129 -99072167 + Lx4B LINE L1 6349 7058 0 1 1100 5484 156 20 7 chrX 67578143 67579388 -99070908 + Lx5 LINE L1 5280 6547 -503 1 1100 2650 54 9 0 chrX 67579388 67579723 -99070573 + ORR1A1 LTR MaLR 1 338 -8 1 1100 3080 181 30 0 chrX 67579725 67580217 -99070079 + Lx5 LINE L1 6541 7047 -3 1 1100 686 308 87 62 chrX 67580285 67580626 -99069670 + MLT2D LTR ERVL 3 364 -50 1 1100 333 0 0 0 chrX 67580626 67580663 -99069633 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1100 686 308 87 62 chrX 67580663 67580723 -99069573 + MLT2D LTR ERVL 365 414 0 1 1100 2579 108 61 3 chrX 67580771 67581133 -99069163 - RLTR9A2 LTR ERVK 0 383 1 1 1100 985 253 118 80 chrX 67581982 67582347 -99067949 - MTE2a LTR MaLR 0 379 1 1 1100 465 256 93 14 chrX 67582869 67583008 -99067288 + RSINE1 SINE B4 2 151 -14 1 1100 261 0 0 0 chrX 67583012 67583041 -99067255 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1100 261 132 133 26 chrX 67583074 67583170 -99067126 - Lx5 LINE L1 -4 7054 6963 1 1100 310 322 69 17 chrX 67583237 67583411 -99066885 + MER53 DNA hAT 10 192 -1 1 1100 217 280 48 17 chrX 67584821 67584909 -99065387 + MIRm SINE MIR 85 175 -33 1 1100 213 132 0 0 chrX 67585275 67585313 -99064983 + (CTTTG)n Simple_repeat Simple_repeat 2 39 0 1 1100 766 222 76 6 chrX 67585584 67585756 -99064540 - RMER30 DNA MER1_type -3 199 16 1 1100 4338 142 95 89 chrX 67586092 67586989 -99063307 + RMER19B LTR ERVK 1 902 0 1 1100 2840 234 100 89 chrX 67587429 67587738 -99062558 + Lx7 LINE L1 6624 6957 -739 1 1100 409 101 28 2 chrX 67587738 67587810 -99062486 + RLTR13B1 LTR ERVK 830 893 0 1 1100 2840 234 100 89 chrX 67587810 67588490 -99061806 + Lx7 LINE L1 6958 7696 0 1 1100 439 234 65 9 chrX 67588770 67588878 -99061418 - B1F SINE Alu -9 140 27 1 1100 23 0 0 0 chrX 67589177 67589200 -99061096 + AT_rich Low_complexity Low_complexity 1 23 0 1 1100 250 277 96 0 chrX 67589303 67589386 -99060910 - MER20 DNA MER1_type -33 186 96 1 1100 262 310 30 10 chrX 67589422 67589523 -99060773 + Lx9 LINE L1 5866 5968 -1676 1 1100 310 304 125 7 chrX 67589540 67589676 -99060620 - HAL1-3A_ME LINE L1 -423 2435 2284 1 1100 320 339 102 21 chrX 67589652 67589839 -99060457 - HAL1-3A_ME LINE L1 -414 2444 2243 1 1100 372 106 0 60 chrX 67589859 67589959 -99060337 + G-rich Low_complexity Low_complexity 3 96 0 1 1100 931 210 248 10 chrX 67589967 67590016 -99060280 - MTD LTR MaLR -6 413 359 1 1100 2196 133 119 3 chrX 67590016 67590369 -99059927 + ORR1B1 LTR MaLR 1 394 0 1 1100 931 211 233 23 chrX 67590369 67590642 -99059654 - MTD LTR MaLR -61 358 10 1 1100 432 232 0 22 chrX 67591495 67591595 -99058701 + PB1D7 SINE Alu 17 114 -6 1 1100 1172 302 42 0 chrX 67592354 67592785 -99057511 + L1MB3 LINE L1 5642 6090 -93 1 1100 375 244 99 106 chrX 67592828 67592840 -99057456 + B4 SINE B4 79 224 -64 1 1100 688 193 59 0 chrX 67592840 67592975 -99057321 + B1_Mur1 SINE Alu 5 147 -2 1 1100 254 188 152 30 chrX 67593231 67593297 -99056999 + PB1 SINE Alu 47 120 -7 1 1100 926 286 80 72 chrX 67593451 67593698 -99056598 + MTE2a LTR MaLR 13 249 -130 1 1100 1892 167 83 40 chrX 67593698 67594048 -99056248 - ORR1B2 LTR MaLR 0 367 3 1 1100 7972 162 62 7 chrX 67594050 67595481 -99054815 - ORR1B2-int LTR MaLR 0 1509 1 1 1100 1740 171 159 0 chrX 67595481 67595794 -99054502 - ORR1B2 LTR MaLR -2 365 1 1 1100 926 286 80 72 chrX 67595794 67595903 -99054393 + MTE2a LTR MaLR 250 375 -4 1 1100 1112 230 9 0 chrX 67595903 67596116 -99054180 + B3 SINE B2 1 215 -1 1 1100 368 301 28 28 chrX 67596611 67596792 -99053504 + L1M5 LINE L1 5641 5821 -303 1 1100 234 171 14 54 chrX 67597619 67597693 -99052603 + MER3 DNA MER1_type 110 180 -29 1 1100 570 124 0 0 chrX 67597749 67597838 -99052458 + (TA)n Simple_repeat Simple_repeat 1 89 0 1 1100 302 200 92 0 chrX 67597842 67597907 -99052389 + HAL1-3A_ME LINE L1 1975 2045 -813 1 1100 189 0 0 0 chrX 67598574 67598595 -99051701 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1100 1021 234 84 54 chrX 67600197 67600603 -99049693 - L1MB3 LINE L1 0 6183 5766 1 1100 380 119 30 0 chrX 67600607 67600674 -99049622 + (TATG)n Simple_repeat Simple_repeat 2 70 0 1 1100 1072 259 39 14 chrX 67600766 67601014 -99049282 + RMER15 LTR ERVL 285 532 -43 1 1100 288 0 0 0 chrX 67601014 67601046 -99049250 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1100 495 0 0 0 chrX 67601046 67601100 -99049196 + (GA)n Simple_repeat Simple_repeat 1 55 0 1 1100 1072 259 39 14 chrX 67601100 67601132 -99049164 + RMER15 LTR ERVL 533 572 -3 1 1100 226 284 100 9 chrX 67601288 67601398 -99048898 - L2 LINE L2 -467 2952 2833 1 1100 219 271 14 28 chrX 67601440 67601512 -99048784 - ID SINE ID -146 78 8 1 1100 218 250 42 56 chrX 67601955 67602027 -99048269 - PB1 SINE Alu -36 91 21 1 1100 207 100 0 0 chrX 67602045 67602075 -99048221 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 1 1100 7347 28 27 0 chrX 67602151 67602965 -99047331 - L1Md_T LINE L1 0 6582 5747 1 1100 200 347 170 6 chrX 67602970 67603141 -99047155 - L2 LINE L2 -893 2526 2328 1 1100 1480 65 38 5 chrX 67604751 67604937 -99045359 - B2_Mm2 SINE B2 -3 192 1 1 1100 857 204 190 16 chrX 67605078 67605262 -99045034 - B3 SINE B2 0 216 1 1 1100 414 294 0 0 chrX 67605679 67605788 -99044508 + B3A SINE B2 4 112 -86 1 1100 429 20 0 0 chrX 67605813 67605863 -99044433 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1100 576 263 126 13 chrX 67605876 67606035 -99044261 + B3A SINE B2 1 176 -22 1 1100 225 0 0 0 chrX 67606035 67606060 -99044236 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 1100 421 264 58 75 chrX 67606060 67606088 -99044208 + B2_Mm2 SINE B2 164 185 -10 1 1100 355 291 95 103 chrX 67606848 67607101 -99043195 - MLT1B LTR MaLR -34 356 106 1 1100 457 258 33 1 chrX 67608297 67608406 -99041890 + PB1D7 SINE Alu 6 123 -4 1 1100 339 25 0 0 chrX 67608942 67608982 -99041314 + (ATTAG)n Simple_repeat Simple_repeat 5 44 0 1 1100 190 211 0 0 chrX 67610408 67610446 -99039850 - MER5A DNA MER1_type 0 189 152 1 1100 479 244 0 0 chrX 67610496 67610578 -99039718 + ID4_ SINE ID 2 83 0 1 1100 323 185 25 0 chrX 67610595 67610676 -99039620 + GA-rich Low_complexity Low_complexity 4 86 0 1 1100 180 255 39 19 chrX 67610688 67610740 -99039556 + MER5A DNA MER1_type 115 167 -22 1 1100 433 229 94 0 chrX 67611300 67611396 -99038900 - B1F SINE Alu -1 148 44 1 1100 1101 278 158 6 chrX 67611869 67612349 -99037947 - MER68 LTR ERVL -8 555 3 1 1100 556 176 10 10 chrX 67612849 67612952 -99037344 - B1_Mur2 SINE Alu 0 149 47 1 1100 309 333 21 0 chrX 67613797 67613890 -99036406 - B4 SINE B4 -185 107 13 1 1100 526 198 70 55 chrX 67613943 67614071 -99036225 + B1F SINE Alu 19 148 -1 1 1100 277 269 74 37 chrX 67614388 67614496 -99035800 + MIR3 SINE MIR 96 207 -1 1 1100 1115 29 35 21 chrX 67614560 67614701 -99035595 + B1_Mm SINE Alu 5 147 0 1 1100 229 324 26 37 chrX 67615162 67615293 -99035003 - MIRb SINE MIR -56 152 23 1 1100 343 318 0 50 chrX 67617317 67617499 -99032797 + GA-rich Low_complexity Low_complexity 4 176 0 1 1100 408 194 66 88 chrX 67617518 67617654 -99032642 + Lx8 LINE L1 7267 7399 -74 1 1100 294 125 0 0 chrX 67618144 67618192 -99032104 + (CCG)n Simple_repeat Simple_repeat 2 49 0 1 1100 494 268 118 0 chrX 67619856 67619983 -99030313 + B3A SINE B2 4 145 -53 1 1100 463 291 76 72 chrX 67620138 67620262 -99030034 + B4A SINE B4 55 180 -112 1 1100 195 42 0 0 chrX 67620262 67620286 -99030010 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1100 463 264 85 79 chrX 67620286 67620398 -99029898 + B4A SINE B4 181 292 0 1 1100 249 347 20 0 chrX 67620437 67620535 -99029761 - LTR16A LTR ERVL -46 405 306 1 1100 462 96 0 0 chrX 67620536 67620609 -99029687 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 1100 406 270 92 63 chrX 67620886 67621060 -99029236 + MLT1B LTR MaLR 3 181 -209 1 1100 704 341 34 13 chrX 67621061 67621333 -99028963 + B4A SINE B4 4 292 0 1 1100 373 282 146 64 chrX 67621394 67621629 -99028667 + MLT1B LTR MaLR 192 436 -31 1 1100 381 148 131 1 chrX 67621662 67621763 -99028533 + PB1 SINE Alu 10 120 -7 1 1100 268 273 12 38 chrX 67623715 67623795 -99026501 + RMER15 LTR ERVL 337 414 -161 1 1100 578 269 45 22 chrX 67624053 67624232 -99026064 + B3A SINE B2 1 183 -15 1 1100 315 0 0 0 chrX 67625299 67625334 -99024962 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1100 334 300 59 13 chrX 67626551 67626703 -99023593 + L1MDa LINE L1 959 1117 -5516 1 1100 963 229 10 0 chrX 67626795 67626996 -99023300 + B3 SINE B2 3 205 -11 1 1100 265 244 61 24 chrX 67627068 67627188 -99023108 + L1M5 LINE L1 5562 5683 -496 1 1100 512 40 27 0 chrX 67627191 67627265 -99023031 + (CAGAGA)n Simple_repeat Simple_repeat 2 77 0 1 1100 403 270 99 14 chrX 67627408 67627625 -99022671 + L1MDa LINE L1 1605 1847 -4786 1 1100 237 65 0 0 chrX 67628399 67628430 -99021866 + (CAGT)n Simple_repeat Simple_repeat 3 33 0 1 1100 265 350 53 29 chrX 67629139 67629383 -99020913 + HERV16-int LTR ERVL 1670 1919 -3077 1 1100 2846 44 15 0 chrX 67629600 67629941 -99020355 - ORR1A1 LTR MaLR 0 346 1 1 1100 13299 60 32 2 chrX 67629941 67631680 -99018616 - ORR1A1-int LTR MaLR 0 1792 1 1 1100 2584 22 63 3 chrX 67631685 67632003 -99018293 - ORR1A1 LTR MaLR -9 337 1 1 1100 941 303 78 3 chrX 67632500 67632844 -99017452 - ORR1D2 LTR MaLR 0 370 1 1 1101 969 137 179 0 chrX 67633423 67633613 -99016683 + URR1A DNA MER1_type 2 225 -1 1 1101 189 0 0 0 chrX 67635312 67635333 -99014963 + (CCCTG)n Simple_repeat Simple_repeat 5 25 0 1 1101 4321 18 0 0 chrX 67636545 67637034 -99013262 + L1Md_F2 LINE L1 5096 5584 -299 2 1101 7968 60 2 1 chrX 67637036 67638031 -99012265 + L1Md_F2 LINE L1 5587 6582 0 2 1101 525 227 15 36 chrX 67638036 67638173 -99012123 + L1_Rod LINE L1 5427 5560 -287 2 1101 180 0 0 0 chrX 67638657 67638677 -99011619 + (CACCC)n Simple_repeat Simple_repeat 3 22 0 2 1101 300 221 88 0 chrX 67640211 67640279 -99010017 - MTD LTR MaLR -57 362 289 2 1101 4541 100 17 6 chrX 67640279 67640913 -99009383 - Lx4A LINE L1 -349 6709 6069 2 1101 209 186 0 0 chrX 67647260 67647303 -99002993 + CT-rich Low_complexity Low_complexity 1 43 0 2 1101 714 183 0 0 chrX 67647314 67647483 -99002813 + CT-rich Low_complexity Low_complexity 1 169 0 2 1101 441 0 0 0 chrX 67648779 67648828 -99001468 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1101 755 226 63 5 chrX 67649694 67649885 -99000411 - MTC LTR MaLR -219 202 1 2 1101 4753 209 30 17 chrX 67650864 67652072 -98998224 + Lx5 LINE L1 5455 6691 -359 2 1101 270 270 43 86 chrX 67652137 67652299 -98997997 - RMER17C LTR ERVK -104 306 152 2 1101 681 196 0 83 chrX 67652300 67652456 -98997840 - RMER17C-int LTR ERVK -486 2752 2610 2 1101 242 229 0 0 chrX 67652592 67652640 -98997656 + LSU-rRNA_Hsa rRNA rRNA 4200 4247 -788 2 1101 592 177 46 47 chrX 67652640 67652831 -98997465 - RMER17C-int LTR ERVK -700 2538 2261 2 1101 266 235 173 73 chrX 67652882 67653061 -98997235 - RLTR19-int LTR ERVK -2752 3385 3189 2 1101 1134 242 12 12 chrX 67653076 67653319 -98996977 + Lx5 LINE L1 6687 6929 -121 2 1101 24 0 0 0 chrX 67653396 67653420 -98996876 + AT_rich Low_complexity Low_complexity 1 24 0 2 1101 3062 23 0 6 chrX 67655547 67655895 -98994401 - ORR1A0 LTR MaLR 0 346 1 2 1101 2805 64 0 0 chrX 67658326 67658672 -98991624 + ORR1A1 LTR MaLR 1 346 0 2 1101 3258 66 2 0 chrX 67658913 67659308 -98990988 - MTA_Mm LTR MaLR 0 396 1 2 1101 7917 39 3 4 chrX 67660054 67661001 -98989295 - L1Md_F3 LINE L1 0 6584 5639 2 1101 3057 66 5 10 chrX 67662881 67663277 -98987019 + MTA_Mm LTR MaLR 1 394 -2 2 1101 183 80 0 0 chrX 67664398 67664423 -98985873 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 1101 609 157 0 0 chrX 67664472 67664606 -98985690 + GA-rich Low_complexity Low_complexity 2 135 0 2 1101 2619 49 9 3 chrX 67665647 67665974 -98984322 - L1Md_F3 LINE L1 -11 6573 6245 2 1101 3335 31 0 0 chrX 67665974 67666363 -98983933 + L1Md_A LINE L1 5660 6048 -534 2 1101 32183 64 4 5 chrX 67666358 67671346 -98978950 - L1Md_F LINE L1 -580 5303 319 2 1101 242 73 24 0 chrX 67671484 67671525 -98978771 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1101 674 317 19 0 chrX 67672391 67672599 -98977697 + B3 SINE B2 1 212 -4 2 1101 216 0 0 0 chrX 67673565 67673589 -98976707 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1101 195 129 0 0 chrX 67673679 67673710 -98976586 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1101 472 313 9 36 chrX 67676312 67676531 -98973765 - B3 SINE B2 -3 213 1 2 1101 450 108 0 0 chrX 67678022 67678105 -98972191 + (CA)n Simple_repeat Simple_repeat 2 84 0 2 1101 694 263 25 5 chrX 67678154 67678353 -98971943 + B3 SINE B2 14 216 0 2 1101 243 0 0 0 chrX 67682373 67682400 -98967896 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1101 1174 239 44 38 chrX 67684551 67684891 -98965405 + Lx4B LINE L1 6710 7051 -7 2 1101 381 171 0 22 chrX 67685015 67685105 -98965191 + Lx3A LINE L1 6891 6978 -3 2 1101 253 283 30 98 chrX 67687505 67687679 -98962617 + B4A SINE B4 36 206 -86 2 1101 316 86 69 0 chrX 67687679 67687737 -98962559 + L1_Mus4 LINE L1 6569 6630 -6 2 1101 214 296 54 87 chrX 67687737 67687753 -98962543 + B4 SINE B4 207 220 -72 2 1101 410 301 64 6 chrX 67688180 67688337 -98961959 + B3 SINE B2 38 203 -13 2 1101 243 0 0 0 chrX 67689556 67689583 -98960713 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 2 1101 240 111 0 0 chrX 67691531 67691567 -98958729 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2 1101 219 36 0 0 chrX 67692123 67692151 -98958145 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 1101 192 77 0 0 chrX 67692492 67692518 -98957778 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1101 2350 205 61 22 chrX 67694690 67695279 -98955017 + RMER19B LTR ERVK 1 612 -290 2 1101 2466 78 57 8 chrX 67696115 67696516 -98953780 + BGLII LTR ERVK 1 421 0 2 1101 3746 162 73 73 chrX 67696998 67697888 -98952408 - RMER19B LTR ERVK -12 890 1 2 1101 354 289 90 48 chrX 67698096 67698263 -98952033 - MLT1B LTR MaLR -199 191 18 2 1101 7038 129 34 124 chrX 67698395 67698733 -98951563 - RLTR21 LTR ERVK -2 1570 1206 2 1101 342 98 0 0 chrX 67698733 67698784 -98951512 + (CATA)n Simple_repeat Simple_repeat 4 54 0 2 1101 7038 129 34 124 chrX 67698784 67699025 -98951271 - RLTR21 LTR ERVK -367 1205 1080 2 1101 327 25 0 0 chrX 67699025 67699065 -98951231 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1101 7038 129 34 124 chrX 67699065 67700069 -98950227 - RLTR21 LTR ERVK -493 1079 130 2 1101 422 88 0 14 chrX 67700593 67700662 -98949634 + (GGGA)n Simple_repeat Simple_repeat 3 70 0 2 1101 1005 161 20 20 chrX 67700857 67701053 -98949243 + ORR1C2 LTR MaLR 1 196 -188 2 1101 575 244 0 8 chrX 67701095 67701227 -98949069 + ORR1C2 LTR MaLR 172 302 -82 2 1101 299 351 30 0 chrX 67701493 67701627 -98948669 + MLT1A0 LTR MaLR 62 199 -166 2 1101 216 283 19 0 chrX 67701705 67701758 -98948538 + B1_Mus2 SINE Alu 2 55 -92 2 1101 469 214 0 93 chrX 67701758 67701819 -98948477 + B1_Mur1 SINE Alu 24 82 -67 2 1101 471 18 0 0 chrX 67701819 67701875 -98948421 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1101 469 214 0 93 chrX 67701875 67701944 -98948352 + B1_Mur1 SINE Alu 83 143 -6 2 1101 186 43 0 0 chrX 67701944 67701967 -98948329 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 1101 399 240 186 14 chrX 67701973 67702145 -98948151 - MLT1B-int LTR MaLR -907 464 272 2 1101 1804 164 50 32 chrX 67702145 67702548 -98947748 - RMER17C LTR ERVK 0 410 1 2 1101 399 240 186 14 chrX 67702548 67702665 -98947631 - MLT1B-int LTR MaLR -1100 271 126 2 1101 3632 116 69 26 chrX 67702665 67703612 -98946684 + RLTR13D1 LTR ERVK 1 965 -58 2 1101 364 264 7 128 chrX 67703611 67703759 -98946537 - MLT-int LTR MaLR -1600 135 6 2 1101 404 326 71 68 chrX 67704249 67704575 -98945721 - MLT1B LTR MaLR -52 338 12 2 1101 348 314 58 0 chrX 67705492 67705629 -98944667 - RMER15 LTR ERVL -34 541 397 2 1101 660 312 30 40 chrX 67706137 67706441 -98943855 + RMER15-int LTR ERVL 528 828 -4171 2 1101 2084 158 20 0 chrX 67706474 67706821 -98943475 - Lx LINE L1 -12 6642 6289 2 1101 186 71 0 0 chrX 67706835 67706863 -98943433 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 1101 1093 70 7 0 chrX 67706869 67707012 -98943284 - B1_Mus1 SINE Alu 0 148 5 2 1101 660 157 0 0 chrX 67707012 67707114 -98943182 + B1_Mur2 SINE Alu 24 125 -24 2 1101 2537 245 30 15 chrX 67707122 67707726 -98942570 + RMER15-int LTR ERVL 868 1480 -3519 2 1101 7932 135 42 16 chrX 67707726 67709432 -98940864 + Lx2B LINE L1 5236 7000 0 2 1101 1534 264 56 58 chrX 67709445 67709948 -98940348 + RMER15-int LTR ERVL 1467 1968 -3031 2 1101 618 78 29 0 chrX 67710156 67710258 -98940038 + (GA)n Simple_repeat Simple_repeat 2 106 0 2 1101 261 0 0 0 chrX 67710942 67710971 -98939325 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 1101 545 248 98 0 chrX 67711030 67711163 -98939133 - B3 SINE B2 -69 147 2 2 1101 302 298 45 22 chrX 67711166 67711300 -98938996 + L1M2 LINE L1 2534 2670 -3473 2 1101 332 279 22 34 chrX 67716526 67716704 -98933592 + (CTCA)n Simple_repeat Simple_repeat 1 176 0 2 1101 225 0 0 0 chrX 67717290 67717315 -98932981 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 2 1101 22 56 0 0 chrX 67717429 67717465 -98932831 + AT_rich Low_complexity Low_complexity 1 36 0 2 1101 430 281 40 49 chrX 67717541 67717788 -98932508 + L1MA5 LINE L1 6033 6277 -23 2 1101 234 313 0 6 chrX 67719871 67719964 -98930332 + MLT2C1 LTR ERVL 11 99 -315 2 1101 338 310 48 21 chrX 67719998 67720143 -98930153 + MLT2C1 LTR ERVL 202 350 -47 2 1101 23 54 0 0 chrX 67720941 67720978 -98929318 + AT_rich Low_complexity Low_complexity 1 37 0 2 1101 22 35 0 0 chrX 67721053 67721082 -98929214 + AT_rich Low_complexity Low_complexity 1 29 0 2 1101 1594 43 0 0 chrX 67721149 67721335 -98928961 + B2_Mm1a SINE B2 1 186 -7 2 1101 331 250 0 136 chrX 67721627 67721650 -98928646 + MT2B LTR ERVL 150 155 -446 2 1101 834 172 0 33 chrX 67721650 67721800 -98928496 + B1_Mus2 SINE Alu 3 147 0 2 1101 183 80 19 57 chrX 67721800 67721853 -98928443 + A-rich Low_complexity Low_complexity 2 52 0 2 1101 792 87 24 0 chrX 67721854 67721981 -98928315 + (GGA)n Simple_repeat Simple_repeat 3 132 0 2 1101 798 246 26 16 chrX 67722021 67722215 -98928081 + B3A SINE B2 2 197 -1 2 1101 764 194 0 21 chrX 67722266 67722408 -98927888 - B1_Mus1 SINE Alu -8 140 2 2 1101 652 293 34 5 chrX 67723579 67723785 -98926511 + B3 SINE B2 3 214 -2 2 1101 264 280 58 58 chrX 67724148 67724319 -98925977 - Charlie1a DNA MER1_type -1022 433 263 2 1101 739 250 65 5 chrX 67724380 67724581 -98925715 + B3 SINE B2 2 214 -2 2 1101 315 0 0 0 chrX 67724779 67724814 -98925482 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1101 24 53 0 0 chrX 67724877 67724915 -98925381 + AT_rich Low_complexity Low_complexity 1 38 0 2 1101 685 209 19 7 chrX 67725598 67725752 -98924544 - MTD LTR MaLR -259 160 5 2 1101 532 263 66 0 chrX 67725914 67726051 -98924245 + RSINE1 SINE B4 2 147 -18 2 1101 399 181 56 0 chrX 67726566 67726638 -98923658 - B3 SINE B2 -6 210 135 2 1101 21 0 0 0 chrX 67730222 67730243 -98920053 + GC_rich Low_complexity Low_complexity 1 21 0 2 1101 1191 35 0 0 chrX 67731086 67731228 -98919068 + B1_Mus2 SINE Alu 1 142 -5 2 1101 3259 133 46 28 chrX 67731958 67732562 -98917734 + RLTR17 LTR ERVK 1 615 -77 2 1101 824 193 14 0 chrX 67733506 67733646 -98916650 + B1_Mur2 SINE Alu 2 143 -6 2 1101 837 279 50 68 chrX 67734967 67735100 -98915196 - B4A SINE B4 -2 290 172 2 1101 831 118 0 117 chrX 67735100 67735263 -98915033 + B1_Mm SINE Alu 1 144 -3 2 1101 270 0 0 0 chrX 67735263 67735293 -98915003 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 1101 837 279 50 68 chrX 67735293 67735439 -98914857 - B4A SINE B4 -121 171 16 2 1101 7641 135 28 120 chrX 67735449 67736594 -98913702 + RLTR21 LTR ERVK 1 1078 -494 2 1101 198 0 0 0 chrX 67736594 67736616 -98913680 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 1101 7641 135 28 120 chrX 67736616 67736857 -98913439 + RLTR21 LTR ERVK 1079 1204 -368 2 1101 402 108 0 0 chrX 67736857 67736922 -98913374 + (TATG)n Simple_repeat Simple_repeat 2 66 0 3 1101 7641 135 28 120 chrX 67736922 67737264 -98913032 + RLTR21 LTR ERVK 1205 1571 -1 2 1101 359 288 118 45 chrX 67737398 67737576 -98912720 + MLT1B LTR MaLR 18 208 -182 3 1101 4035 120 31 1 chrX 67737791 67738709 -98911587 - Lx2B LINE L1 -806 6194 5236 3 1101 2537 245 30 15 chrX 67738709 67739313 -98910983 - RMER15-int LTR ERVL -3519 1480 868 3 1101 660 157 0 0 chrX 67739321 67739423 -98910873 - B1_Mur2 SINE Alu -24 125 24 3 1101 1093 70 7 0 chrX 67739423 67739566 -98910730 + B1_Mus1 SINE Alu 5 148 0 3 1101 204 67 0 0 chrX 67739569 67739599 -98910697 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 3 1101 2087 158 20 0 chrX 67739614 67739961 -98910335 + Lx LINE L1 6289 6642 -12 3 1101 660 312 30 40 chrX 67739994 67740298 -98909998 - RMER15-int LTR ERVL -4171 828 528 3 1101 348 314 58 0 chrX 67740806 67740943 -98909353 + RMER15 LTR ERVL 397 541 -34 3 1101 404 326 71 68 chrX 67741860 67742186 -98908110 + MLT1B LTR MaLR 12 338 -52 3 1101 364 264 7 128 chrX 67742675 67742823 -98907473 + MLT-int LTR MaLR 6 135 -1600 3 1101 3618 120 66 28 chrX 67742813 67743769 -98906527 - RLTR13D1 LTR ERVK -58 965 1 3 1101 399 240 186 14 chrX 67743769 67743886 -98906410 + MLT1B-int LTR MaLR 125 270 -1101 3 1101 1804 164 50 32 chrX 67743886 67744289 -98906007 + RMER17C LTR ERVK 1 410 0 3 1101 399 240 186 14 chrX 67744289 67744461 -98905835 + MLT1B-int LTR MaLR 271 463 -908 3 1101 186 43 0 0 chrX 67744467 67744490 -98905806 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3 1101 469 214 0 93 chrX 67744490 67744559 -98905737 - B1_Mur1 SINE Alu -6 143 83 3 1101 363 23 0 0 chrX 67744559 67744603 -98905693 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1101 469 214 0 93 chrX 67744603 67744664 -98905632 - B1_Mur1 SINE Alu -67 82 24 3 1101 216 283 19 0 chrX 67744664 67744717 -98905579 - B1_Mus2 SINE Alu -92 55 2 3 1101 299 351 30 0 chrX 67744795 67744929 -98905367 - MLT1A0 LTR MaLR -166 199 62 3 1101 575 244 0 8 chrX 67745195 67745327 -98904969 - ORR1C2 LTR MaLR -82 302 172 3 1101 1005 161 20 20 chrX 67745369 67745565 -98904731 - ORR1C2 LTR MaLR -188 196 1 3 1101 422 88 0 14 chrX 67745760 67745829 -98904467 + (TCCC)n Simple_repeat Simple_repeat 3 70 0 3 1101 7052 128 34 124 chrX 67746353 67747357 -98902939 + RLTR21 LTR ERVK 129 1078 -494 3 1101 327 25 0 0 chrX 67747357 67747397 -98902899 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1101 7052 128 34 124 chrX 67747397 67747638 -98902658 + RLTR21 LTR ERVK 1079 1204 -368 3 1101 342 98 0 0 chrX 67747638 67747689 -98902607 + (TATG)n Simple_repeat Simple_repeat 4 54 0 3 1101 7052 128 34 124 chrX 67747689 67748027 -98902269 + RLTR21 LTR ERVK 1205 1569 -3 3 1101 354 289 90 48 chrX 67748159 67748326 -98901970 + MLT1B LTR MaLR 18 191 -199 3 1101 3746 162 73 73 chrX 67748534 67749424 -98900872 + RMER19B LTR ERVK 1 890 -12 3 1101 2466 78 57 8 chrX 67749906 67750307 -98899989 - BGLII LTR ERVK 0 421 1 3 1101 2350 205 61 22 chrX 67751143 67751732 -98898564 - RMER19B LTR ERVK -290 612 1 3 1101 192 77 0 0 chrX 67753904 67753930 -98896366 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 1101 219 36 0 0 chrX 67754271 67754299 -98895997 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 1101 240 111 0 0 chrX 67754855 67754891 -98895405 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 1101 243 0 0 0 chrX 67756839 67756866 -98893430 + (GTTTG)n Simple_repeat Simple_repeat 2 28 0 3 1101 410 301 64 6 chrX 67758085 67758242 -98892054 - B3 SINE B2 -13 203 38 3 1101 214 296 54 87 chrX 67758669 67758685 -98891611 - B4 SINE B4 -72 220 207 3 1101 316 86 69 0 chrX 67758685 67758743 -98891553 - L1_Mus4 LINE L1 -6 6630 6569 3 1101 253 283 30 98 chrX 67758743 67758917 -98891379 - B4A SINE B4 -86 206 36 3 1101 381 171 0 22 chrX 67761318 67761408 -98888888 - Lx3A LINE L1 -3 6978 6891 3 1101 1129 239 59 47 chrX 67761532 67761870 -98888426 - Lx4B LINE L1 -7 7051 6710 3 1102 222 37 0 0 chrX 67764235 67764262 -98886034 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1102 695 271 20 5 chrX 67768278 67768478 -98881818 - B3 SINE B2 0 216 14 3 1102 378 0 0 0 chrX 67768526 67768568 -98881728 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1102 502 303 9 36 chrX 67770049 67770268 -98880028 + B3 SINE B2 1 213 -3 3 1102 222 240 0 0 chrX 67772864 67772914 -98877382 + A-rich Low_complexity Low_complexity 1 50 0 3 1102 216 0 0 0 chrX 67772993 67773017 -98877279 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 1102 674 317 19 0 chrX 67773963 67774171 -98876125 - B3 SINE B2 -4 212 1 3 1102 242 73 24 0 chrX 67775037 67775078 -98875218 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1102 632 160 0 0 chrX 67775216 67775322 -98874974 + L1Md_F LINE L1 222 327 -6192 3 1102 29016 56 3 4 chrX 67775322 67780331 -98869965 + L1Md_F LINE L1 301 5303 -580 3 1102 3344 31 0 0 chrX 67780326 67780715 -98869581 - L1Md_A LINE L1 -534 6048 5660 3 1102 2612 49 9 3 chrX 67780715 67781042 -98869254 + L1Md_F3 LINE L1 6245 6573 -11 3 1102 609 157 0 0 chrX 67782083 67782217 -98868079 + CT-rich Low_complexity Low_complexity 2 135 0 3 1102 183 80 0 0 chrX 67782266 67782291 -98868005 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 1102 3099 61 5 10 chrX 67783412 67783808 -98866488 - MTA_Mm LTR MaLR -2 394 1 3 1102 7861 39 3 5 chrX 67785688 67786636 -98863660 + L1Md_F3 LINE L1 5639 6584 0 3 1102 3285 61 2 0 chrX 67787381 67787776 -98862520 + MTA_Mm LTR MaLR 1 396 0 3 1102 2794 64 0 0 chrX 67788017 67788363 -98861933 - ORR1A1 LTR MaLR 0 346 1 3 1102 3103 20 0 0 chrX 67790810 67791156 -98859140 + ORR1A0 LTR MaLR 1 346 0 3 1102 23 0 0 0 chrX 67793252 67793275 -98857021 + AT_rich Low_complexity Low_complexity 1 23 0 3 1102 1173 225 12 12 chrX 67793352 67793595 -98856701 - Lx5 LINE L1 -121 6929 6687 3 1102 311 200 0 16 chrX 67793601 67793662 -98856634 + RLTR19-int LTR ERVK 3181 3240 -2897 3 1102 603 177 46 47 chrX 67793841 67794032 -98856264 + RMER17C-int LTR ERVK 2261 2538 -700 3 1102 255 208 0 0 chrX 67794032 67794080 -98856216 - LSU-rRNA_Hsa rRNA rRNA -788 4247 4200 3 1102 781 194 6 75 chrX 67794206 67794379 -98855917 + RMER17C-int LTR ERVK 2610 2770 -468 3 1102 4854 211 30 13 chrX 67794590 67795791 -98854505 - Lx5 LINE L1 -359 6691 5455 3 1102 666 226 63 5 chrX 67796768 67796959 -98853337 + MTC LTR MaLR 1 202 -219 3 1102 405 0 0 0 chrX 67797824 67797869 -98852427 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 1102 693 178 0 0 chrX 67799164 67799321 -98850975 + GA-rich Low_complexity Low_complexity 1 157 0 3 1102 209 186 0 0 chrX 67799332 67799375 -98850921 + GA-rich Low_complexity Low_complexity 1 43 0 3 1102 510 83 28 0 chrX 67802573 67802645 -98847651 + L1_Mm LINE L1 4382 4455 -1428 3 1102 3084 73 2 5 chrX 67802645 67803042 -98847254 + MTA_Mm LTR MaLR 1 396 0 3 1102 294 289 236 31 chrX 67803365 67803526 -98846770 + Lx8 LINE L1 6790 6983 -490 3 1102 1997 217 49 46 chrX 67803547 67804136 -98846160 - MTC-int LTR MaLR -667 591 1 3 1102 1926 205 32 2 chrX 67804136 67804541 -98845755 - MTC LTR MaLR 0 421 5 3 1102 648 179 9 0 chrX 67805512 67805624 -98844672 + L1_Mur2 LINE L1 5478 5590 -287 3 1102 4355 95 7 0 chrX 67805624 67806204 -98844092 + MT2B2 LTR ERVL 1 584 0 3 1102 482 204 0 0 chrX 67806204 67806292 -98844004 + MERVL_2A-int LTR ERVL 1 88 -5397 3 1102 4474 89 0 0 chrX 67806293 67806902 -98843394 - L1_Mm LINE L1 -1406 4477 3869 3 1102 271 83 0 0 chrX 67806895 67806931 -98843365 + L1_Mus3 LINE L1 5872 5907 -731 3 1102 2377 155 13 5 chrX 67806940 67807322 -98842974 + MERVL_2A-int LTR ERVL 803 1187 -4574 3 1102 297 50 25 0 chrX 67807322 67807362 -98842934 - L1_Mus1 LINE L1 -946 4937 4897 3 1102 7918 73 6 5 chrX 67807352 67808525 -98841771 + L1_Mus1 LINE L1 4985 6159 -408 3 1102 3405 43 2 0 chrX 67808525 67808920 -98841376 + MTA_Mm LTR MaLR 1 396 0 3 1102 7918 53 3 7 chrX 67808920 67809327 -98840969 + L1_Mus1 LINE L1 6160 6567 0 3 1102 1129 123 75 0 chrX 67809353 67809540 -98840756 + MERVL_2A-int LTR ERVL 1176 1376 -4385 3 1102 3296 190 46 46 chrX 67809947 67810792 -98839504 - RLTR13A LTR ERVK 0 855 11 3 1102 363 242 62 24 chrX 67810990 67811148 -98839148 + MTD LTR MaLR 238 393 -26 3 1102 387 0 0 0 chrX 67816795 67816838 -98833458 + (TC)n Simple_repeat Simple_repeat 1 43 0 3 1102 303 93 0 0 chrX 67816838 67816880 -98833416 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1102 1156 56 14 0 chrX 67816913 67817057 -98833239 - B1_Mm SINE Alu 0 147 2 3 1102 1000 207 50 4 chrX 67818792 67819030 -98831266 - Lx9 LINE L1 -155 7489 7241 3 1102 207 0 0 0 chrX 67819187 67819210 -98831086 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 1102 858 291 109 43 chrX 67819238 67819726 -98830570 - Lx9 LINE L1 -135 7509 6990 3 1102 486 346 58 0 chrX 67820078 67820234 -98830062 - RSINE1 SINE B4 0 165 1 3 1102 187 164 0 52 chrX 67821379 67821437 -98828859 + GA-rich Low_complexity Low_complexity 6 60 0 3 1102 237 65 0 0 chrX 67822362 67822393 -98827903 + (ACTG)n Simple_repeat Simple_repeat 3 33 0 3 1102 396 273 94 8 chrX 67823169 67823386 -98826910 - L1MDa LINE L1 -4786 1847 1605 3 1102 458 68 27 0 chrX 67823529 67823603 -98826693 + (TCTCTG)n Simple_repeat Simple_repeat 2 77 0 3 1102 240 250 64 21 chrX 67823626 67823720 -98826576 - L1M5 LINE L1 -505 5659 5562 3 1102 829 235 15 0 chrX 67823792 67823992 -98826304 - B3 SINE B2 -11 205 3 3 1102 329 300 59 13 chrX 67824084 67824236 -98826060 - L1MDa LINE L1 -5516 1117 959 3 1102 384 22 0 0 chrX 67825453 67825498 -98824798 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 1102 574 267 22 28 chrX 67826479 67826699 -98823597 - B3A SINE B2 -3 213 1 3 1102 230 286 12 38 chrX 67826957 67827037 -98823259 - RMER15 LTR ERVL -161 414 337 3 1102 557 250 26 0 chrX 67827996 67828112 -98822184 - RSINE1 SINE B4 -40 125 7 3 1102 259 323 90 57 chrX 67828127 67828304 -98821992 - LTR16A LTR ERVL -165 286 104 3 1102 221 200 18 0 chrX 67829338 67829393 -98820903 + A-rich Low_complexity Low_complexity 5 60 0 3 1102 467 178 0 0 chrX 67829507 67829597 -98820699 - ORR1B2 LTR MaLR -273 94 5 3 1102 25 31 0 0 chrX 67830823 67830855 -98819441 + AT_rich Low_complexity Low_complexity 1 32 0 3 1102 402 21 0 0 chrX 67830856 67830903 -98819393 + (GA)n Simple_repeat Simple_repeat 1 47 0 3 1102 618 256 21 49 chrX 67830909 67831053 -98819243 - RSINE1 SINE B4 -19 146 7 3 1102 800 187 0 0 chrX 67831606 67831745 -98818551 - B1_Mur4 SINE Alu -6 144 6 3 1102 335 311 30 114 chrX 67831745 67831767 -98818529 - B4 SINE B4 -66 199 74 3 1102 355 277 11 0 chrX 67831784 67831878 -98818418 - PB1D10 SINE Alu -5 112 18 4 1102 291 270 0 98 chrX 67832073 67832155 -98818141 + MTEa LTR MaLR 126 199 -180 4 1102 443 241 43 8 chrX 67832176 67832293 -98818003 + MTEa LTR MaLR 259 379 0 4 1102 555 296 67 6 chrX 67832438 67832616 -98817680 + B3A SINE B2 7 182 -34 4 1102 509 345 64 44 chrX 67832975 67833224 -98817072 - MLT1A0 LTR MaLR -103 262 9 4 1102 405 0 0 0 chrX 67834747 67834792 -98815504 + (TTA)n Simple_repeat Simple_repeat 2 46 0 4 1102 797 159 68 0 chrX 67835103 67835235 -98815061 - B1_Mur4 SINE Alu -7 143 3 4 1102 4496 44 0 0 chrX 67835789 67836329 -98813967 + L1Md_F2 LINE L1 6043 6582 0 4 1102 1246 34 0 0 chrX 67836953 67837099 -98813197 - B1_Mus2 SINE Alu 0 147 2 4 1102 860 256 14 9 chrX 67837174 67837387 -98812909 + B3 SINE B2 1 214 -2 4 1102 13565 79 11 9 chrX 67837390 67838021 -98812275 - L1_Mm LINE L1 -7 5876 5234 4 1102 513 0 0 0 chrX 67838021 67838078 -98812218 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 1102 13565 79 11 9 chrX 67838078 67838676 -98811620 - L1_Mm LINE L1 -650 5233 4641 4 1102 189 0 0 0 chrX 67838676 67838697 -98811599 + (TTG)n Simple_repeat Simple_repeat 1 21 0 4 1102 13565 79 11 9 chrX 67838697 67839462 -98810834 - L1_Mm LINE L1 -1243 4640 3877 4 1102 5185 74 13 4 chrX 67839462 67840151 -98810145 + L1_Mus2 LINE L1 5872 6566 0 4 1102 786 279 196 6 chrX 67840408 67840725 -98809571 + MTE2a LTR MaLR 3 379 0 4 1102 2613 82 27 3 chrX 67840872 67841237 -98809059 + Lx3_Mus LINE L1 6631 7004 -5 4 1102 216 0 0 0 chrX 67842050 67842074 -98808222 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 4 1102 489 323 79 51 chrX 67843145 67843434 -98806862 - L1MC2 LINE L1 0 6344 6037 4 1102 1179 167 32 5 chrX 67843434 67843651 -98806645 + URR1A DNA MER1_type 4 226 0 4 1102 489 323 79 51 chrX 67843651 67843831 -98806465 - L1MC2 LINE L1 -308 6036 5862 4 1102 1380 189 135 21 chrX 67843893 67844153 -98806143 - MTD LTR MaLR 0 419 121 4 1102 3778 71 4 2 chrX 67844153 67844647 -98805649 + L1_Mus3 LINE L1 6144 6638 0 4 1102 1380 189 135 21 chrX 67844647 67844726 -98805570 - MTD LTR MaLR -299 120 43 4 1102 500 270 60 0 chrX 67845074 67845322 -98804974 - L1M4 LINE L1 -564 5614 5352 4 1102 32773 76 1 1 chrX 67846546 67852540 -98797756 - L1Md_F2 LINE L1 -13 6569 572 4 1102 391 292 64 14 chrX 67852746 67853072 -98797224 - L1M2 LINE L1 -3385 3460 3146 4 1102 725 226 14 0 chrX 67853127 67853273 -98797023 - B1_Mur1 SINE Alu -1 148 1 4 1102 274 233 67 0 chrX 67854008 67854098 -98796198 - L1_Rod LINE L1 -3662 2185 2090 4 1102 290 285 95 21 chrX 67854667 67854911 -98795385 - L1M2 LINE L1 -4304 2545 2322 4 1102 521 290 70 63 chrX 67855298 67855600 -98794696 - MamRep434 DNA TcMar -100 326 23 4 1102 1334 333 39 17 chrX 67855613 67855658 -98794638 + Lx9 LINE L1 6367 6414 -1230 4 1102 243 0 0 0 chrX 67855658 67855685 -98794611 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1102 1334 333 39 17 chrX 67855685 67855783 -98794513 + Lx9 LINE L1 6415 6511 -1133 4 1102 3689 56 0 19 chrX 67855783 67856259 -98794037 - L1Md_F2 LINE L1 -1 6581 6115 4 1102 1334 333 39 17 chrX 67856259 67856701 -98793595 + Lx9 LINE L1 6512 6965 -679 4 1102 619 332 56 93 chrX 67856718 67856965 -98793331 + Lx8 LINE L1 6743 6993 -480 4 1102 1917 104 43 40 chrX 67856965 67857294 -98793002 + Lx LINE L1 6315 6644 -10 4 1102 619 332 56 93 chrX 67857294 67857797 -98792499 + Lx8 LINE L1 6994 7465 -8 4 1102 955 78 8 0 chrX 67857944 67858073 -98792223 + B1_Mus1 SINE Alu 19 148 0 4 1102 490 320 50 10 chrX 67858079 67858278 -98792018 - B3 SINE B2 -9 207 1 4 1102 393 22 0 0 chrX 67858822 67858868 -98791428 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1102 678 93 0 0 chrX 67858868 67858975 -98791321 + (GA)n Simple_repeat Simple_repeat 1 108 0 4 1102 342 302 27 36 chrX 67859265 67859375 -98790921 + PB1D10 SINE Alu 1 109 -8 4 1102 22 0 0 0 chrX 67859883 67859905 -98790391 + AT_rich Low_complexity Low_complexity 1 22 0 4 1102 978 152 40 0 chrX 67861035 67861212 -98789084 - URR1A DNA MER1_type -6 220 37 4 1102 180 381 0 31 chrX 67861371 67861436 -98788860 + L2b LINE L2 3242 3304 -71 4 1102 1323 197 154 48 chrX 67861977 67862308 -98787988 - ORR1D1 LTR MaLR -8 366 1 4 1102 321 231 44 80 chrX 67862308 67862458 -98787838 + RMER17A LTR ERVK 269 412 -339 4 1102 234 0 0 0 chrX 67862458 67862484 -98787812 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 1102 275 363 20 88 chrX 67863222 67863370 -98786926 + Charlie15a DNA MER1_type 4 141 -83 4 1102 451 310 16 0 chrX 67863815 67863944 -98786352 + MER5A1 DNA MER1_type 34 164 -2 4 1102 3161 31 8 32 chrX 67864131 67864531 -98785765 - RLTR10 LTR ERVK 0 390 1 4 1102 8421 19 0 1 chrX 67864531 67865529 -98784767 - RLTR10-int LTR ERVK -1 1986 990 4 1102 7716 34 1 0 chrX 67865606 67866553 -98783743 - RLTR10-int LTR ERVK -999 988 41 4 1102 3161 31 8 32 chrX 67866563 67866963 -98783333 - RLTR10 LTR ERVK 0 390 1 4 1102 275 413 41 27 chrX 67866964 67867111 -98783185 - MER115 DNA Tip100 -543 150 2 4 1102 184 236 0 98 chrX 67867562 67867623 -98782673 + MIRc SINE MIR 123 177 -91 4 1102 780 254 49 11 chrX 67867683 67867706 -98782590 - B3A SINE B2 -8 190 169 4 1102 465 19 0 0 chrX 67867706 67867760 -98782536 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 1102 780 254 49 11 chrX 67867760 67867919 -98782377 - B3A SINE B2 -30 168 1 4 1102 600 256 98 29 chrX 67870850 67871023 -98779273 - MTD LTR MaLR -14 405 221 4 1102 410 0 20 0 chrX 67871041 67871091 -98779205 + (TC)n Simple_repeat Simple_repeat 1 51 0 4 1102 3958 233 84 39 chrX 67871105 67872301 -98777995 - Lx4B LINE L1 -4 7054 5805 4 1102 1299 115 0 0 chrX 67872300 67872492 -98777804 - L1_Mur2 LINE L1 -284 5593 5402 4 1102 7868 91 12 12 chrX 67872492 67873678 -98776618 - ORR1A0-int LTR MaLR -606 1186 1 4 1102 2795 27 0 0 chrX 67873682 67874020 -98776276 - ORR1A0 LTR MaLR -8 338 1 4 1102 677 264 96 5 chrX 67875416 67875614 -98774682 - B3 SINE B2 0 216 1 4 1102 625 133 15 0 chrX 67875624 67875759 -98774537 + (TCTA)n Simple_repeat Simple_repeat 2 138 0 4 1102 379 314 10 10 chrX 67875760 67875863 -98774433 - B1_Mur2 SINE Alu -13 136 34 4 1102 252 321 26 68 chrX 67876006 67876123 -98774173 - RMER4B LTR ERVK -396 189 78 4 1102 572 316 169 39 chrX 67876270 67876638 -98773658 - HAL1 LINE L1 -331 2176 1756 4 1102 207 0 0 0 chrX 67876638 67876661 -98773635 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 4 1102 572 316 169 39 chrX 67876661 67876730 -98773566 - HAL1 LINE L1 -752 1755 1683 4 1102 344 335 94 36 chrX 67877111 67877144 -98773152 - HAL1 LINE L1 -954 1553 1522 4 1102 331 322 91 0 chrX 67877144 67877265 -98773031 + B1F SINE Alu 3 134 -15 4 1102 344 335 94 36 chrX 67877265 67878054 -98772242 - HAL1 LINE L1 -986 1521 684 4 1102 3125 34 0 230 chrX 67878108 67878674 -98771622 - RLTR10C LTR ERVK 0 436 1 4 1102 230 222 32 0 chrX 67879438 67879501 -98770795 + Lx9 LINE L1 5925 5989 -1655 4 1102 225 307 88 10 chrX 67880007 67880109 -98770187 - ORR1E LTR MaLR -20 359 250 4 1102 409 321 80 21 chrX 67880631 67880832 -98769464 - ORR1E LTR MaLR -174 200 1 4 1102 1141 75 0 0 chrX 67880862 67881009 -98769287 + B1_Mus2 SINE Alu 1 147 0 4 1102 248 364 88 44 chrX 67881045 67881249 -98769047 + MIR SINE MIR 29 241 -21 4 1102 1275 228 7 14 chrX 67881452 67881732 -98768564 - Lx6 LINE L1 0 7460 7183 4 1102 444 219 66 25 chrX 67881732 67881854 -98768442 - Lx6 LINE L1 -633 6827 6701 4 1102 186 362 99 30 chrX 67882105 67882236 -98768060 - MIR3 SINE MIR -64 144 5 4 1102 1725 222 94 36 chrX 67882271 67882343 -98767953 + Lx8 LINE L1 6600 6677 -796 4 1102 804 250 19 14 chrX 67882343 67882554 -98767742 + B3 SINE B2 5 216 0 4 1102 1725 222 94 36 chrX 67882554 67882980 -98767316 + Lx8 LINE L1 6678 7126 -347 4 1102 388 274 86 36 chrX 67884190 67884258 -98766038 - Lx8 LINE L1 0 7473 7401 4 1102 306 0 0 0 chrX 67884258 67884292 -98766004 + (TC)n Simple_repeat Simple_repeat 1 34 0 4 1102 388 274 86 36 chrX 67884292 67884443 -98765853 - Lx8 LINE L1 -73 7400 7243 4 1102 666 326 142 11 chrX 67884601 67884883 -98765413 - MLT1H1 LTR MaLR -11 544 226 4 1102 705 184 26 0 chrX 67884893 67885045 -98765251 - L1MA5 LINE L1 0 6300 6145 4 1102 219 360 67 18 chrX 67885142 67885306 -98764990 + L2c LINE L2 3049 3220 -167 4 1102 798 279 25 0 chrX 67885812 67886009 -98764287 + B3 SINE B2 1 202 -14 4 1102 252 217 16 16 chrX 67886473 67886534 -98763762 + MIRb SINE MIR 120 180 -88 4 1102 252 111 0 0 chrX 67886762 67886807 -98763489 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 4 1102 1664 177 100 6 chrX 67887168 67887487 -98762809 - MTC LTR MaLR -2 419 71 4 1102 473 32 0 0 chrX 67887503 67887565 -98762731 - L1Md_F2 LINE L1 -16 6566 6505 4 1102 198 103 0 0 chrX 67887572 67887601 -98762695 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1102 6706 36 0 0 chrX 67887640 67888435 -98761861 - L1Md_T LINE L1 -2 6580 5786 4 1102 275 49 24 0 chrX 67888435 67888476 -98761820 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 4 1102 8153 19 0 0 chrX 67888476 67889679 -98760617 - L1Md_A LINE L1 -21 6561 5359 4 1102 374 205 0 82 chrX 67889682 67889767 -98760529 - MTC LTR MaLR -343 78 1 4 1102 374 346 84 24 chrX 67890129 67890295 -98760001 - MER20B DNA MER1_type -606 177 2 4 1102 206 364 0 13 chrX 67890380 67890458 -98759838 - L3 LINE CR1 -693 3796 3720 4 1102 182 325 49 49 chrX 67890745 67890826 -98759470 + L2a LINE L2 3343 3423 -3 4 1102 180 361 66 29 chrX 67891417 67891554 -98758742 + L3 LINE CR1 3795 3936 -553 4 1102 425 363 92 28 chrX 67891607 67891967 -98758329 + L3 LINE CR1 4041 4423 -66 4 1102 605 301 18 35 chrX 67892672 67892841 -98757455 - ID_B1 SINE B4 -13 211 46 4 1102 1155 158 198 13 chrX 67892857 67893094 -98757202 - MTD LTR MaLR -20 399 119 4 1102 620 111 0 10 chrX 67893171 67893271 -98757025 + (TTC)n Simple_repeat Simple_repeat 2 100 0 4 1102 394 349 45 8 chrX 67893285 67893418 -98756878 - ID_B1 SINE B4 -1 223 86 4 1102 21 0 0 0 chrX 67894525 67894546 -98755750 + AT_rich Low_complexity Low_complexity 1 21 0 4 1102 305 319 64 0 chrX 67894711 67894805 -98755491 + MIRm SINE MIR 19 118 -158 4 1102 324 0 0 0 chrX 67894806 67894842 -98755454 + (TTG)n Simple_repeat Simple_repeat 1 36 0 4 1102 216 0 0 0 chrX 67894842 67894866 -98755430 + (TGG)n Simple_repeat Simple_repeat 3 26 0 4 1102 243 0 0 0 chrX 67894866 67894893 -98755403 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 137 7560 35 10 0 chrX 67895115 67896057 -98754239 - L1_Mus1 LINE L1 0 6567 5617 4 1103 2922 116 4 0 chrX 67896057 67896515 -98753781 + L1_Mm LINE L1 4928 5387 -496 4 1103 221 255 59 0 chrX 67896633 67896684 -98753612 + B1F2 SINE Alu 38 91 -58 4 1103 423 0 0 0 chrX 67896684 67896731 -98753565 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1103 246 32 0 0 chrX 67896766 67896797 -98753499 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 5 1103 186 191 0 0 chrX 67897742 67897789 -98752507 + (CAG)n Simple_repeat Simple_repeat 2 48 0 5 1103 3414 33 2 2 chrX 67898466 67898862 -98751434 - MTA_Mm LTR MaLR 0 396 1 5 1103 342 280 16 23 chrX 67898969 67899095 -98751201 + MLT2C1 LTR ERVL 10 134 -263 5 1103 296 381 27 54 chrX 67899095 67899206 -98751090 + B1F1 SINE Alu 1 108 -41 5 1103 372 22 0 0 chrX 67899380 67899425 -98750871 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1103 3138 71 7 14 chrX 67899552 67899982 -98750314 + Lx3_Mus LINE L1 6574 7000 -9 5 1103 204 159 22 22 chrX 67900343 67900388 -98749908 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1103 507 288 34 40 chrX 67900508 67900685 -98749611 - B4 SINE B4 -114 178 3 5 1103 297 75 0 0 chrX 67901836 67901876 -98748420 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 1103 658 255 52 13 chrX 67902274 67902429 -98747867 + RSINE1 SINE B4 3 163 -2 5 1103 780 163 0 0 chrX 67902528 67902681 -98747615 + (TA)n Simple_repeat Simple_repeat 2 154 0 5 1103 198 0 0 0 chrX 67902681 67902703 -98747593 + (GA)n Simple_repeat Simple_repeat 2 23 0 5 1103 371 279 47 0 chrX 67902720 67902806 -98747490 - RSINE1 SINE B4 -63 102 13 5 1103 568 342 52 34 chrX 67903079 67903348 -98746948 - L2c LINE L2 -4 3383 3110 5 1103 428 384 34 0 chrX 67904082 67904259 -98746037 - L3 LINE CR1 -1189 3300 3118 5 1103 30137 89 15 82 chrX 67904933 67911755 -98738541 - L1Md_F2 LINE L1 -1 6581 273 5 1103 1510 254 53 23 chrX 67911961 67912250 -98738046 - MTD LTR MaLR -8 411 107 5 1103 1026 129 0 0 chrX 67912250 67912389 -98737907 + B1_Mur4 SINE Alu 3 141 -9 5 1103 1510 254 53 23 chrX 67912389 67912498 -98737798 - MTD LTR MaLR -313 106 1 5 1103 7432 40 1 3 chrX 67912596 67913539 -98736757 - L1Md_F3 LINE L1 -1 6583 5643 5 1103 856 197 42 42 chrX 67913501 67913718 -98736578 + L1Md_A LINE L1 367 583 -6141 5 1103 36818 46 12 4 chrX 67913805 67920045 -98730251 - L1Md_A LINE L1 -1 6581 286 5 1103 368 300 0 0 chrX 67920050 67920130 -98730166 + MTE2b LTR MaLR 18 97 -282 5 1103 1153 251 76 7 chrX 67920133 67920284 -98730012 + MTE2b LTR MaLR 58 215 -164 5 1103 189 0 0 0 chrX 67920284 67920305 -98729991 + (GTTTG)n Simple_repeat Simple_repeat 2 22 0 5 1103 1153 251 76 7 chrX 67920305 67920454 -98729842 + MTE2b LTR MaLR 216 378 -1 5 1103 383 282 224 32 chrX 67922569 67922815 -98727481 - MLT1A0 LTR MaLR -3 362 70 5 1103 284 311 50 124 chrX 67922981 67923264 -98727032 + ORR1E LTR MaLR 92 353 -6 5 1103 1185 212 9 61 chrX 67923813 67924185 -98726111 - Lx4B LINE L1 -119 6939 6508 5 1103 1070 129 124 38 chrX 67924188 67924397 -98725899 - L1_Mur2 LINE L1 -6264 448 222 5 1103 542 164 0 28 chrX 67924416 67924523 -98725773 - Lx7 LINE L1 -1908 5788 5685 5 1103 4303 185 28 24 chrX 67924583 67925606 -98724690 - Lx7 LINE L1 -1054 4826 3799 5 1103 258 361 0 0 chrX 67925653 67925736 -98724560 - MIRc SINE MIR -124 144 62 5 1103 294 354 110 0 chrX 67925884 67926011 -98724285 - LTR33 LTR ERVL -1 514 374 5 1103 22 35 0 0 chrX 67926414 67926443 -98723853 + AT_rich Low_complexity Low_complexity 1 29 0 5 1103 275 19 71 36 chrX 67927246 67927302 -98722994 + (TTTTG)n Simple_repeat Simple_repeat 3 60 0 5 1103 698 191 42 21 chrX 67927303 67927447 -98722849 - B1_Mur3 SINE Alu -1 148 2 5 1103 236 306 164 7 chrX 67927477 67927763 -98722533 - L1MCa LINE L1 -4694 1814 1484 5 1103 1796 32 55 0 chrX 67927827 67928047 -98722249 - L1_Mus1 LINE L1 -1 6566 6335 5 1103 2298 87 68 51 chrX 67928047 67928400 -98721896 + RLTR10D LTR ERVK 1 359 0 5 1103 717 128 171 63 chrX 67928402 67928560 -98721736 + IAP-d-int LTR ERVK 3 177 -6365 5 1103 814 184 0 0 chrX 67928553 67928711 -98721585 + IAP-d-int LTR ERVK 346 503 -6039 5 1103 1822 204 22 5 chrX 67928711 67929081 -98721215 + IAP-d-int LTR ERVK 5007 5382 -1160 5 1103 5720 92 0 64 chrX 67929068 67929865 -98720431 + IAP-d-int LTR ERVK 5673 6432 -110 5 1103 3381 44 2 0 chrX 67929865 67930274 -98720022 + L1Md_F2 LINE L1 6173 6582 0 5 1103 5720 92 0 64 chrX 67930274 67930397 -98719899 + IAP-d-int LTR ERVK 6433 6534 -8 5 1103 2491 94 53 0 chrX 67930405 67930746 -98719550 + RLTR10D LTR ERVK 1 359 0 5 1103 963 16 0 32 chrX 67930746 67930863 -98719433 - L1_Mus1 LINE L1 -227 6340 6224 5 1103 3289 58 7 0 chrX 67930849 67931282 -98719014 + L1_Mus1 LINE L1 5814 6249 -318 5 1103 548 400 54 21 chrX 67931327 67931812 -98718484 - L1MCb LINE L1 -5502 543 43 5 1103 571 256 27 30 chrX 67931834 67932097 -98718199 + L1MD2 LINE L1 4604 4860 -1286 5 1103 281 47 0 23 chrX 67932436 67932480 -98717816 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 5 1103 1010 75 8 0 chrX 67932483 67932616 -98717680 - B1_Mus1 SINE Alu -12 136 3 5 1103 566 284 50 27 chrX 67932663 67932993 -98717303 + L1MD2 LINE L1 5735 6081 -161 5 1103 853 268 49 0 chrX 67932999 67933204 -98717092 + ID_B1 SINE B4 9 223 -1 5 1103 396 300 14 0 chrX 67933278 67933418 -98716878 + L1MD2 LINE L1 6195 6336 -23 5 1103 238 272 46 13 chrX 67933435 67933588 -98716708 + A-rich Low_complexity Low_complexity 2 159 0 5 1103 667 286 70 0 chrX 67933590 67933761 -98716535 + ID_B1 SINE B4 1 183 -41 5 1103 542 288 119 0 chrX 67933821 67934116 -98716180 + L1MD3 LINE L1 7469 7798 -197 5 1103 330 270 96 14 chrX 67934337 67934555 -98715741 + L1MC4a LINE L1 7637 7872 -10 5 1103 909 214 29 43 chrX 67934639 67934849 -98715447 + B3 SINE B2 8 214 -2 5 1103 249 312 144 30 chrX 67936119 67936251 -98714045 - MIR3 SINE MIR -30 178 32 5 1103 724 290 69 8 chrX 67937090 67937351 -98712945 + B4A SINE B4 1 277 -15 5 1103 341 309 106 72 chrX 67937389 67937720 -98712576 + L1MEg LINE L1 867 1208 -4876 5 1103 7958 53 2 1 chrX 67938146 67939142 -98711154 + L1Md_F3 LINE L1 5587 6583 -1 5 1103 324 0 0 0 chrX 67939412 67939448 -98710848 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 1103 247 328 124 22 chrX 67939657 67939794 -98710502 - MLT1A1 LTR MaLR -4 404 254 5 1103 1218 301 44 39 chrX 67940511 67941051 -98709245 - Lx8 LINE L1 -9 7464 6922 5 1103 402 320 114 10 chrX 67941474 67941676 -98708620 - MIRb SINE MIR -20 248 26 5 1103 474 251 249 30 chrX 67941883 67942080 -98708216 - Lx8 LINE L1 -542 6931 6692 5 1103 298 286 66 0 chrX 67942078 67942169 -98708127 + Lx8 LINE L1 7133 7229 -244 5 1103 564 287 114 6 chrX 67942316 67942474 -98707822 + B4A SINE B4 2 176 -116 5 1103 357 212 49 12 chrX 67942468 67942549 -98707747 - B1_Mur1 SINE Alu -40 109 26 5 1103 741 268 43 23 chrX 67942563 67942910 -98707386 - L1MC4a LINE L1 -296 7586 7233 5 1103 24 32 0 0 chrX 67942993 67943024 -98707272 + AT_rich Low_complexity Low_complexity 1 31 0 5 1103 261 0 0 0 chrX 67943024 67943053 -98707243 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 1103 390 21 0 0 chrX 67943053 67943099 -98707197 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1103 402 256 31 86 chrX 67943107 67943235 -98707061 - RSINE1 SINE B4 -37 128 8 5 1103 350 317 42 7 chrX 67943288 67943431 -98706865 - L1MC4a LINE L1 -1808 6074 5927 5 1103 263 72 0 23 chrX 67943436 67943479 -98706817 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1103 1794 113 70 19 chrX 67943758 67944073 -98706223 - Lx LINE L1 -6 6648 6318 5 1103 560 143 0 0 chrX 67944076 67944160 -98706136 + 4.5SRNA scRNA scRNA 2 85 -9 5 1103 478 267 35 62 chrX 67944246 67944390 -98705906 + RSINE1 SINE B4 26 165 0 5 1103 180 281 0 34 chrX 67944658 67944717 -98705579 + L4 LINE RTE 668 724 -1305 5 1103 628 325 211 60 chrX 67945215 67945661 -98704635 + MER74A LTR ERVL 30 542 -16 5 1103 685 240 14 7 chrX 67945770 67945917 -98704379 + B1_Mur1 SINE Alu 2 149 0 5 1103 371 272 86 71 chrX 67946070 67946280 -98704016 + L1MD2 LINE L1 4992 5204 -942 5 1103 238 136 0 7 chrX 67946280 67946324 -98703972 + L1MD2 LINE L1 5523 5564 -615 5 1103 642 279 62 4 chrX 67946415 67946642 -98703654 + L1MD2 LINE L1 5587 5826 -533 5 1103 1511 220 74 14 chrX 67947197 67947548 -98702748 + RMER1B Other Other 44 415 -651 5 1103 1477 258 54 5 chrX 67947518 67947990 -98702306 + RMER1A Other Other 1 455 -575 5 1103 2780 221 207 48 chrX 67947990 67948879 -98701417 + RMER1A Other Other 1 1030 0 5 1103 339 240 24 40 chrX 67948910 67949036 -98701260 + L1MD2 LINE L1 5878 6001 -241 5 1103 21 0 0 0 chrX 67949406 67949427 -98700869 + AT_rich Low_complexity Low_complexity 1 21 0 5 1103 210 71 0 0 chrX 67949590 67949618 -98700678 + (TC)n Simple_repeat Simple_repeat 1 28 0 5 1103 821 246 147 79 chrX 67950068 67950509 -98699787 - RLTR11A2 LTR ERVK -46 481 11 5 1103 441 362 66 13 chrX 67950778 67951005 -98699291 - L1MEf LINE L1 -4657 1543 1305 5 1103 455 290 210 7 chrX 67951212 67951517 -98698779 - L1MA4 LINE L1 -396 5907 5541 5 1103 1852 188 0 80 chrX 67951517 67951905 -98698391 - ORR1C1 LTR MaLR 0 378 22 5 1103 377 301 76 5 chrX 67951905 67952115 -98698181 - L1MA4 LINE L1 -782 5515 5291 5 1103 237 268 67 44 chrX 67952145 67952235 -98698061 - MTE2a LTR MaLR -192 187 96 5 1103 348 333 84 84 chrX 67952243 67952348 -98697948 - L1MA4 LINE L1 -863 5280 5181 5 1103 226 0 29 29 chrX 67952348 67952383 -98697913 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 5 1103 348 333 84 84 chrX 67952383 67952560 -98697736 - L1MA4 LINE L1 -963 5180 5000 5 1103 1305 250 71 3 chrX 67952560 67952913 -98697383 - MTE2a LTR MaLR 0 379 3 5 1103 348 333 84 84 chrX 67952913 67952963 -98697333 - L1MA4 LINE L1 -1144 4999 4948 5 1103 563 288 30 0 chrX 67953231 67953363 -98696933 - B3A SINE B2 -18 180 45 5 1103 6562 52 5 2 chrX 67953660 67954481 -98695815 - L1Md_F2 LINE L1 -8 6574 5752 5 1103 762 63 4 4 chrX 67954481 67954590 -98695706 + L1_Mm LINE L1 5393 5527 -2355 5 1103 281 226 0 0 chrX 67954661 67954723 -98695573 + RLTR25B LTR ERVK 1 62 -1041 5 1103 911 165 193 45 chrX 67954723 67954991 -98695305 + RLTR25B LTR ERVK 767 1103 0 5 1103 562 291 167 43 chrX 67956164 67956422 -98693874 + B4 SINE B4 3 292 0 5 1103 29 47 0 0 chrX 67956464 67956507 -98693789 + AT_rich Low_complexity Low_complexity 1 43 0 5 1103 1523 254 38 32 chrX 67956904 67957275 -98693021 + MTEb LTR MaLR 1 373 -6 5 1103 6261 66 7 1 chrX 67957665 67958471 -98691825 - L1_Mus1 LINE L1 -4 6563 5753 5 1103 8381 109 19 18 chrX 67959126 67960617 -98689679 - Lx3C LINE L1 -2 6974 5485 5 1103 5338 72 14 1 chrX 67960623 67961319 -98688977 - L1_Mus2 LINE L1 0 6566 5862 5 1103 4907 88 9 0 chrX 67961319 67962020 -98688276 + L1_Mus2 LINE L1 5167 5873 -10 5 1103 23 33 0 0 chrX 67962350 67962380 -98687916 + AT_rich Low_complexity Low_complexity 1 30 0 5 1103 1478 304 34 8 chrX 67962869 67963376 -98686920 + Lx8 LINE L1 6701 7220 -253 5 1103 231 292 192 14 chrX 67963424 67963497 -98686799 + ID_B1 SINE B4 104 189 -35 5 1103 2026 154 45 60 chrX 67963637 67964037 -98686259 + ORR1B1 LTR MaLR 1 394 0 5 1103 334 254 21 152 chrX 67964480 67964644 -98685652 - B1_Mur4 SINE Alu -21 128 2 6 1103 22 0 0 0 chrX 67964659 67964681 -98685615 + AT_rich Low_complexity Low_complexity 1 22 0 6 1103 690 213 59 0 chrX 67965057 67965226 -98685070 - Lx9 LINE L1 -199 7445 7267 6 1103 696 294 63 18 chrX 67965229 67965451 -98684845 - B4A SINE B4 -60 232 1 6 1103 606 333 22 22 chrX 67965451 67965658 -98684638 - B4 SINE B4 -62 230 24 6 1103 961 260 94 8 chrX 67967357 67967624 -98682672 - B4 SINE B4 0 292 3 6 1103 28 0 0 0 chrX 67967911 67967939 -98682357 + AT_rich Low_complexity Low_complexity 1 28 0 6 1103 639 284 62 0 chrX 67967963 67968125 -98682171 - B3A SINE B2 0 198 27 6 1103 3135 93 2 51 chrX 67968235 67968453 -98681843 + Lx3_Mus LINE L1 6099 6301 -708 6 1103 2211 87 132 11 chrX 67968453 67968801 -98681495 - RLTR10 LTR ERVK 0 390 1 6 1103 3135 93 2 51 chrX 67968801 67969094 -98681202 + Lx3_Mus LINE L1 6302 6585 -424 6 1103 1106 95 0 0 chrX 67969094 67969242 -98681054 + B1_Mus1 SINE Alu 1 148 0 6 1103 27925 70 1 1 chrX 67969261 67973168 -98677128 + L1_Mm LINE L1 1964 5872 -11 6 1103 6968 19 0 0 chrX 67973171 67974509 -98675787 + L1Md_T LINE L1 5098 6435 -147 6 1103 3283 8 0 0 chrX 67974509 67974878 -98675418 - L1Md_A LINE L1 0 6582 6214 6 1103 1189 75 0 0 chrX 67974876 67975035 -98675261 + L1Md_T LINE L1 6423 6581 -1 6 1103 5698 56 1 3 chrX 67975031 67975753 -98674543 + L1Md_F2 LINE L1 5862 6582 0 6 1103 485 161 0 0 chrX 67975753 67975834 -98674462 + Lx3_Mus LINE L1 6556 6636 -345 6 1103 29 70 0 0 chrX 67975939 67975996 -98674300 + AT_rich Low_complexity Low_complexity 1 57 0 6 1103 529 266 78 39 chrX 67976015 67976195 -98674101 + B3A SINE B2 12 198 0 6 1103 3754 193 30 8 chrX 67977060 67977828 -98672468 - RMER1A Other Other -10 1020 236 6 1103 23 0 0 0 chrX 67978004 67978027 -98672269 + AT_rich Low_complexity Low_complexity 1 23 0 6 1103 435 19 0 0 chrX 67978345 67978397 -98671899 + (TCTA)n Simple_repeat Simple_repeat 4 55 0 6 1103 342 0 0 0 chrX 67978642 67978680 -98671616 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1103 5181 96 0 13 chrX 67980001 67980780 -98669516 - L1_Mus1 LINE L1 -323 5560 4792 6 1103 7203 62 22 2 chrX 67980776 67981779 -98668517 + L1_Mus1 LINE L1 5555 6636 0 6 1103 404 234 36 66 chrX 67982237 67982374 -98667922 - MTEb LTR MaLR 0 379 247 6 1103 275 312 141 7 chrX 67983676 67983819 -98666477 + L2c LINE L2 3214 3371 -4 6 1103 990 167 0 0 chrX 67984021 67984201 -98666095 + CT-rich Low_complexity Low_complexity 1 180 0 6 1103 270 0 0 0 chrX 67984201 67984231 -98666065 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 6 1103 1019 248 142 98 chrX 67984235 67984481 -98665815 - Lx6 LINE L1 -26 7434 7203 6 1103 1146 68 0 0 chrX 67984481 67984628 -98665668 + B1_Mus1 SINE Alu 1 147 -1 6 1103 1019 248 142 98 chrX 67984628 67984994 -98665302 - Lx6 LINE L1 -258 7202 6795 6 1103 636 246 36 21 chrX 67984991 67985176 -98665120 - Lx6 LINE L1 -687 6363 6154 6 1103 207 320 12 25 chrX 67985387 67985467 -98664829 + CT-rich Low_complexity Low_complexity 1 79 0 6 1103 808 275 24 5 chrX 67985780 67985992 -98664304 - ID_B1 SINE B4 -8 216 1 6 1103 241 297 16 0 chrX 67986005 67986069 -98664227 + MLT1A1 LTR MaLR 49 113 -295 6 1103 287 264 17 102 chrX 67986113 67986231 -98664065 + ORR1E LTR MaLR 87 194 -165 6 1103 292 259 12 24 chrX 67986333 67986416 -98663880 + ORR1E LTR MaLR 269 350 -9 6 1103 745 256 22 38 chrX 67986907 67987224 -98663072 - L1MC5 LINE L1 -727 7234 6923 6 1103 33 56 0 0 chrX 67987903 67987957 -98662339 + AT_rich Low_complexity Low_complexity 1 54 0 6 1103 7541 54 1 1 chrX 67987957 67989225 -98661071 - L1Md_F2 LINE L1 -1 6581 5314 6 1103 355 109 0 0 chrX 67989211 67989266 -98661030 + L1_Mm LINE L1 5637 5691 -192 6 1103 3881 40 0 2 chrX 67989270 67989770 -98660526 + L1_Mm LINE L1 4605 5103 -780 6 1103 1088 269 87 13 chrX 67989827 67990208 -98660088 - Lx8 LINE L1 -94 7379 6971 6 1103 4824 35 24 0 chrX 67990269 67990849 -98659447 - L1Md_F3 LINE L1 -8 6576 5983 6 1103 346 293 164 6 chrX 67991228 67991453 -98658843 + L1M5 LINE L1 5552 5814 -370 6 1103 454 244 69 25 chrX 67991800 67992002 -98658294 - L1MC5 LINE L1 -36 7925 7715 6 1103 1927 176 35 22 chrX 67992016 67992383 -98657913 - Lx5 LINE L1 -3 7047 6676 6 1103 470 252 125 78 chrX 67992875 67993275 -98657021 - L1MC5 LINE L1 -781 7180 6762 6 1103 477 321 37 26 chrX 67993294 67993483 -98656813 + MIRb SINE MIR 9 199 -69 6 1103 807 287 5 0 chrX 67993912 67994114 -98656182 + Lx8 LINE L1 7071 7273 -200 6 1103 270 222 9 75 chrX 67994142 67994249 -98656047 + Lx8 LINE L1 7353 7452 -21 6 1103 28 29 0 0 chrX 67995211 67995246 -98655050 + AT_rich Low_complexity Low_complexity 1 35 0 6 1103 33420 5 0 0 chrX 67995345 68000000 -98650296 - L1Md_A LINE L1 0 6582 1929 6 1103 11083 6 1 0 chrX 68000000 68001919 -98648377 - L1Md_A LINE L1 -3955 1928 8 1 1103 2453 64 11 14 chrX 68002301 68002648 -98647648 + L1Md_F2 LINE L1 6237 6582 0 2 1103 1885 137 55 49 chrX 68003421 68003766 -98646530 - Lx4B LINE L1 -4 7054 6708 3 1103 730 287 60 29 chrX 68003771 68004202 -98646094 + RLTR15 LTR ERVK 9 326 -33 4 1103 237 292 270 0 chrX 68004288 68004377 -98645919 + MER58B DNA MER1_type 229 341 0 5 1103 414 0 0 0 chrX 68004598 68004644 -98645652 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1103 818 143 0 125 chrX 68004703 68004863 -98645433 + ORR1A3 LTR MaLR 1 140 -186 7 1103 5424 138 7 4 chrX 68004863 68005700 -98644596 - MERVL_2A-int LTR ERVL -691 5070 4231 8 1103 506 88 0 0 chrX 68005701 68005769 -98644527 - MT2B LTR ERVL -448 153 86 9 1103 288 0 0 0 chrX 68005769 68005801 -98644495 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1 1103 4887 84 6 1 chrX 68005807 68006464 -98643832 - L1_Mus3 LINE L1 -13 6625 5966 1 1103 5467 96 2 2 chrX 68006464 68007430 -98642866 + L1_Mus3 LINE L1 5009 5974 -664 1 1103 745 71 0 0 chrX 68007430 68007528 -98642768 - MT2B LTR ERVL -498 103 6 9 1103 442 182 0 57 chrX 68007528 68007563 -98642733 + MERVL-int LTR ERVL 4729 4762 -723 1 1103 2229 114 9 0 chrX 68007563 68007887 -98642409 + ORR1A2 LTR MaLR 1 327 0 1 1103 442 182 0 57 chrX 68007887 68007956 -98642340 + MERVL-int LTR ERVL 4763 4827 -658 1 1103 358 85 0 0 chrX 68007977 68008024 -98642272 - ORR1A3 LTR MaLR -8 318 272 1 1103 841 47 0 0 chrX 68008039 68008146 -98642150 - B1_Mm SINE Alu 0 147 41 1 1103 1892 129 21 0 chrX 68008155 68008434 -98641862 - ORR1A3 LTR MaLR -41 285 1 1 1103 305 303 40 16 chrX 68008480 68008604 -98641692 - L1MD3 LINE L1 -1 7994 7868 1 1103 30 27 0 0 chrX 68008625 68008662 -98641634 + AT_rich Low_complexity Low_complexity 1 37 0 1 1103 757 180 287 0 chrX 68008662 68008829 -98641467 - B3 SINE B2 -1 215 1 1 1103 826 251 137 19 chrX 68008833 68009197 -98641099 - MTD LTR MaLR -8 411 5 1 1103 583 268 203 28 chrX 68009286 68009754 -98640542 - L1MC4a LINE L1 -234 7648 7099 2 1103 507 151 54 54 chrX 68009763 68009875 -98640421 - MTEb LTR MaLR 0 379 268 2 1103 305 299 50 75 chrX 68009877 68010036 -98640260 + L1MEc LINE L1 1175 1329 -5086 2 1103 470 326 56 25 chrX 68010711 68011070 -98639226 + L1MEc LINE L1 1344 1713 -4702 2 1103 827 290 87 32 chrX 68011250 68012212 -98638084 + L1MEc LINE L1 1982 2999 -3320 2 1103 709 162 86 22 chrX 68012351 68012490 -98637806 - B3 SINE B2 0 216 69 2 1103 556 207 147 67 chrX 68012535 68012685 -98637611 - B3A SINE B2 -1 197 36 2 1103 330 297 42 36 chrX 68012704 68012896 -98637400 - L1MB7 LINE L1 -107 6071 5879 2 1103 335 267 158 25 chrX 68013062 68013258 -98637038 - L1M5 LINE L1 -835 5311 5090 2 1103 883 263 48 98 chrX 68013260 68013657 -98636639 - MTEa LTR MaLR 0 379 3 2 1103 1091 236 84 30 chrX 68013842 68014209 -98636087 - L1MC2 LINE L1 -36 6308 5922 2 1103 354 295 77 14 chrX 68014342 68014457 -98635839 - B1F1 SINE Alu -1 116 1 2 1103 202 444 0 0 chrX 68014589 68014661 -98635635 - MIRm SINE MIR -192 84 13 3 1103 378 320 38 12 chrX 68014664 68014840 -98635456 + MIRc SINE MIR 27 210 -58 3 1103 469 296 26 58 chrX 68016823 68016977 -98633319 + RSINE1 SINE B4 1 149 -16 3 1103 419 0 20 0 chrX 68016978 68017029 -98633267 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 1103 218 355 13 13 chrX 68017595 68017672 -98632624 + ID4_ SINE ID 3 79 -4 3 1103 289 313 0 0 chrX 68017701 68017768 -98632528 + PB1D10 SINE Alu 7 73 -44 3 1103 691 42 10 10 chrX 68017777 68017873 -98632423 + (GAAA)n Simple_repeat Simple_repeat 1 96 0 3 1103 195 267 33 0 chrX 68018168 68018228 -98632068 + L3 LINE CR1 1110 1171 -3318 3 1103 292 266 0 0 chrX 68018503 68018567 -98631729 - ID_B1 SINE B4 -3 221 158 3 1103 183 114 0 0 chrX 68018567 68018602 -98631694 + (A)n Simple_repeat Simple_repeat 1 35 0 3 1103 258 32 0 0 chrX 68018972 68019003 -98631293 + (TCC)n Simple_repeat Simple_repeat 3 33 0 4 1103 1347 58 0 0 chrX 68019430 68019653 -98630643 + (GGAAA)n Simple_repeat Simple_repeat 1 223 0 4 1103 189 275 178 8 chrX 68020353 68020512 -98629784 + MIRb SINE MIR 13 204 -58 4 1103 285 333 108 25 chrX 68021021 68021141 -98629155 - MIR SINE MIR -96 166 37 4 1103 501 17 0 0 chrX 68021190 68021248 -98629048 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 1103 190 345 36 0 chrX 68022561 68022645 -98627651 + L2b LINE L2 3287 3373 -2 4 1103 259 315 0 32 chrX 68023414 68023509 -98626787 + MIRc SINE MIR 71 162 -106 4 1103 228 312 26 13 chrX 68023659 68023737 -98626559 - MIR3 SINE MIR -49 159 81 4 1103 377 321 0 0 chrX 68023862 68023946 -98626350 + B4A SINE B4 2 85 -207 4 1103 273 288 55 0 chrX 68025753 68025826 -98624470 + ID4 SINE ID 3 79 -4 4 1103 21 71 0 0 chrX 68025930 68025972 -98624324 + AT_rich Low_complexity Low_complexity 1 42 0 5 1103 241 333 11 33 chrX 68026080 68026170 -98624126 + RSINE1 SINE B4 78 165 0 5 1104 330 289 13 0 chrX 68026900 68026976 -98623320 + RSINE1 SINE B4 59 135 -30 5 1104 261 210 0 0 chrX 68026985 68027047 -98623249 + (TG)n Simple_repeat Simple_repeat 2 63 0 5 1104 187 286 27 54 chrX 68027147 68027221 -98623075 + MIRb SINE MIR 111 182 -86 5 1104 199 293 17 17 chrX 68027755 68027814 -98622482 - L3 LINE CR1 -140 4349 4291 5 1104 403 214 10 10 chrX 68027814 68027913 -98622383 - Lx6 LINE L1 -61 7399 7301 5 1104 295 306 14 0 chrX 68028192 68028264 -98622032 - RSINE1 SINE B4 -30 135 63 5 1104 1148 215 47 4 chrX 68028390 68028665 -98621631 - Lx9 LINE L1 -248 7396 7110 5 1104 1601 135 107 10 chrX 68028666 68028966 -98621330 + ORR1A4 LTR MaLR 1 329 0 5 1104 6680 160 33 87 chrX 68028966 68030934 -98619362 + ORR1A4-int LTR MaLR 1 1766 -197 5 1104 2033 133 19 3 chrX 68030934 68031258 -98619038 - ORR1A4 LTR MaLR 0 329 1 6 1104 6680 117 11 85 chrX 68031258 68031380 -98618916 + ORR1A4-int LTR MaLR 1767 1864 -99 5 1104 405 177 13 0 chrX 68031380 68031459 -98618837 - Lx9 LINE L1 -709 6935 6856 5 1104 184 318 60 60 chrX 68031604 68031738 -98618558 - MIRb SINE MIR -75 193 60 6 1104 391 282 45 0 chrX 68032263 68032373 -98617923 + MTD LTR MaLR 1 115 -304 6 1104 645 96 0 0 chrX 68032457 68032551 -98617745 + (GAAA)n Simple_repeat Simple_repeat 3 96 0 6 1104 1044 234 71 58 chrX 68032600 68032908 -98617388 - MTE2a LTR MaLR 0 379 68 6 1104 180 250 19 37 chrX 68033370 68033424 -98616872 + MIR3 SINE MIR 154 206 -2 6 1104 269 322 75 90 chrX 68033811 68033999 -98616297 - MIR3 SINE MIR -21 187 3 6 1104 231 304 0 0 chrX 68034137 68034193 -98616103 + (CATA)n Simple_repeat Simple_repeat 4 59 0 6 1104 1170 249 99 67 chrX 68034664 68035068 -98615228 + MTD LTR MaLR 3 419 0 6 1104 28 71 0 0 chrX 68035240 68035296 -98615000 + AT_rich Low_complexity Low_complexity 1 56 0 6 1104 318 353 83 0 chrX 68035304 68035437 -98614859 + L2b LINE L2 3229 3372 -3 7 1104 245 282 17 8 chrX 68036207 68036325 -98613971 - L1M LINE L1 -795 5378 5260 7 1104 518 54 0 13 chrX 68036352 68036427 -98613869 + (TCCC)n Simple_repeat Simple_repeat 2 75 0 7 1104 227 257 211 9 chrX 68036550 68036664 -98613632 - PB1D10 SINE Alu -11 138 2 7 1104 641 356 33 31 chrX 68036820 68037019 -98613277 + Lx8 LINE L1 6805 7009 -464 7 1104 542 53 0 0 chrX 68037019 68037094 -98613202 + Lx LINE L1 6563 6637 -17 7 1104 420 37 0 0 chrX 68037094 68037148 -98613148 + (TAA)n Simple_repeat Simple_repeat 3 56 0 7 1104 641 356 33 31 chrX 68037148 68037338 -98612958 + Lx8 LINE L1 7010 7195 -278 7 1104 1503 191 169 117 chrX 68037824 68037908 -98612388 + MT2A LTR ERVL 6 86 -447 7 1104 5426 112 46 8 chrX 68037908 68038751 -98611545 - Lx LINE L1 0 6654 5780 7 1104 1503 191 169 117 chrX 68038751 68039110 -98611186 + MT2A LTR ERVL 87 475 -58 7 1104 315 0 0 0 chrX 68039110 68039145 -98611151 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1104 1503 191 169 117 chrX 68039145 68039197 -98611099 + MT2A LTR ERVL 476 527 -6 7 1104 478 275 34 54 chrX 68039292 68039646 -98610650 - L1MEf LINE L1 -5156 1044 698 8 1104 504 0 0 0 chrX 68039694 68039750 -98610546 + (TG)n Simple_repeat Simple_repeat 1 56 0 8 1104 470 339 54 52 chrX 68039760 68040046 -98610250 - L1MEf LINE L1 -5488 606 325 8 1104 457 278 24 12 chrX 68040144 68040308 -98609988 - L1MEf LINE L1 -5893 201 36 8 1104 320 292 328 16 chrX 68040573 68040695 -98609601 - RSINE1 SINE B4 -4 161 2 8 1104 598 246 58 61 chrX 68040708 68041037 -98609259 - L1MC3 LINE L1 -2 7783 7456 8 1104 423 389 39 53 chrX 68041083 68041368 -98608928 - B4 SINE B4 -11 281 1 8 1104 414 0 0 0 chrX 68041394 68041440 -98608856 + (TA)n Simple_repeat Simple_repeat 2 47 0 8 1104 284 234 312 0 chrX 68041442 68041519 -98608777 - B1_Mur2 SINE Alu -39 110 10 8 1104 291 222 113 57 chrX 68041765 68041877 -98608419 - L1M5 LINE L1 -1288 4858 4739 8 1104 731 241 0 0 chrX 68041877 68042022 -98608274 + B1_Mur1 SINE Alu 3 147 -2 8 1104 291 222 113 57 chrX 68042022 68042033 -98608263 - L1M5 LINE L1 -1408 4738 4728 8 1104 333 344 8 8 chrX 68042352 68042475 -98607821 - MIRb SINE MIR -126 142 20 8 1104 366 240 0 13 chrX 68043032 68043108 -98607188 + RSINE1 SINE B4 2 76 -89 9 1104 337 331 104 60 chrX 68045558 68045784 -98604512 - MIR SINE MIR -8 260 27 9 1104 227 281 134 0 chrX 68045763 68045845 -98604451 + L2c LINE L2 3266 3358 -29 9 1104 391 321 9 0 chrX 68046558 68046667 -98603629 - PB1D10 SINE Alu -7 110 1 9 1104 270 0 0 0 chrX 68046878 68046908 -98603388 + (TG)n Simple_repeat Simple_repeat 1 30 0 9 1104 405 102 0 0 chrX 68046908 68046967 -98603329 + (GA)n Simple_repeat Simple_repeat 2 60 0 9 1104 400 274 105 21 chrX 68048404 68048643 -98601653 - L1ME3B LINE L1 -142 6098 5840 9 1104 1122 327 33 11 chrX 68048642 68049186 -98601110 - L1ME2 LINE L1 -108 6056 5501 9 1104 378 0 0 0 chrX 68049345 68049387 -98600909 + (TA)n Simple_repeat Simple_repeat 2 43 0 9 1104 2485 117 50 0 chrX 68049533 68049970 -98600326 - L1_Mur3 LINE L1 -2291 3589 3131 9 1104 314 165 0 45 chrX 68049979 68050068 -98600228 + Lx7 LINE L1 7415 7499 -197 1 1104 630 82 0 0 chrX 68050281 68050379 -98599917 + (TG)n Simple_repeat Simple_repeat 2 99 0 1 1104 504 344 81 12 chrX 68050907 68051242 -98599054 - L1MD LINE L1 -1100 5046 4689 1 1104 502 272 168 26 chrX 68051465 68052113 -98598183 + L1MD1 LINE L1 5772 6284 -349 1 1104 843 254 21 8 chrX 68052136 68052378 -98597918 + L1MD1 LINE L1 6345 6589 -44 1 1104 431 297 55 81 chrX 68052430 68052556 -98597740 - L1MD LINE L1 -866 5280 5160 1 1104 973 199 9 58 chrX 68052556 68052780 -98597516 - B3 SINE B2 0 216 4 1 1104 431 297 55 81 chrX 68052780 68052924 -98597372 - L1MD LINE L1 -987 5159 5017 1 1104 3848 59 6 0 chrX 68052936 68053463 -98596833 - L1_Mm LINE L1 -1677 4206 3677 1 1104 2860 67 26 5 chrX 68053463 68053840 -98596456 + L1_Mus1 LINE L1 6183 6567 0 1 1104 278 319 16 16 chrX 68053904 68054025 -98596271 + L1MD2 LINE L1 6033 6153 -206 1 1104 412 183 38 166 chrX 68054164 68054321 -98595975 + L1VL1 LINE L1 221 357 -6065 1 1104 383 263 7 29 chrX 68054397 68054534 -98595762 + L1Md_F LINE L1 573 706 -5813 1 1104 2654 150 6 2 chrX 68054542 68055016 -98595280 + L1Md_F LINE L1 628 1103 -5416 1 1104 1068 148 5 0 chrX 68055020 68055229 -98595067 + L1VL2 LINE L1 774 983 -5352 1 1104 4642 99 65 4 chrX 68055213 68056187 -98594109 + L1VL4 LINE L1 864 1921 -3962 1 1104 197 299 220 18 chrX 68056210 68056319 -98593977 + L3 LINE CR1 4349 4479 -10 1 1104 584 319 106 29 chrX 68056546 68056895 -98593401 + Lx9 LINE L1 6586 6961 -683 1 1104 960 108 0 0 chrX 68057113 68057261 -98593035 + (TTC)n Simple_repeat Simple_repeat 3 150 0 1 1104 498 313 43 39 chrX 68057386 68057725 -98592571 + MLT1D LTR MaLR 7 385 -120 1 1104 192 279 16 16 chrX 68057732 68057794 -98592502 + MIRb SINE MIR 115 176 -92 1 1104 234 176 0 0 chrX 68058311 68058362 -98591934 + (CAA)n Simple_repeat Simple_repeat 2 52 0 1 1104 9173 85 26 3 chrX 68058851 68059861 -98590435 + Lx3_Mus LINE L1 5505 6532 -477 1 1104 2796 61 0 0 chrX 68059861 68060207 -98590089 - ORR1A1 LTR MaLR 0 346 1 1 1104 9173 89 38 4 chrX 68060207 68060649 -98589647 + Lx3_Mus LINE L1 6533 7001 -8 1 1104 2366 284 25 30 chrX 68060683 68061038 -98589258 - RMER1C Other Other -297 1045 699 1 1104 3039 68 5 8 chrX 68061038 68061435 -98588861 + MTA_Mm LTR MaLR 1 396 0 1 1104 7917 79 8 13 chrX 68061435 68062538 -98587758 + MTA_Mm-int LTR MaLR 1 1098 0 1 1104 3180 53 2 8 chrX 68062538 68062936 -98587360 + MTA_Mm LTR MaLR 1 396 0 1 1104 2366 284 25 30 chrX 68062936 68063252 -98587044 - RMER1C Other Other -644 698 377 1 1104 477 0 0 0 chrX 68063608 68063661 -98586635 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1104 222 213 0 0 chrX 68063680 68063727 -98586569 + CT-rich Low_complexity Low_complexity 1 47 0 1 1104 192 40 0 0 chrX 68063728 68063753 -98586543 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 1104 1070 243 99 37 chrX 68064264 68064618 -98585678 - Lx9 LINE L1 -285 7359 6984 1 1104 362 213 18 113 chrX 68064616 68064838 -98585458 + Lx9 LINE L1 7404 7604 -40 1 1104 287 343 20 0 chrX 68065508 68065607 -98584689 - MIR3 SINE MIR -22 186 86 1 1104 569 275 84 0 chrX 68066796 68066974 -98583322 + MER3 DNA MER1_type 1 193 -16 1 1104 396 0 0 0 chrX 68067364 68067408 -98582888 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 1104 405 70 0 0 chrX 68067829 68067886 -98582410 + (TTTTTG)n Simple_repeat Simple_repeat 3 59 0 1 1104 2103 92 0 0 chrX 68068151 68068454 -98581842 - Lx LINE L1 -623 6031 5729 1 1104 226 320 174 23 chrX 68070466 68070658 -98579638 + MIRb SINE MIR 9 236 -32 1 1104 183 184 53 0 chrX 68071101 68071139 -98579157 - L4 LINE RTE -203 1826 1787 1 1104 549 242 30 0 chrX 68071743 68071875 -98578421 + MLT1C LTR MaLR 3 138 -329 1 1104 188 302 0 36 chrX 68072994 68073049 -98577247 - L2a LINE L2 -22 3404 3352 1 1104 271 343 58 43 chrX 68073015 68073176 -98577120 - MIRm SINE MIR -90 186 24 1 1104 242 283 0 16 chrX 68074928 68074989 -98575307 + MLT1C LTR MaLR 496 555 -7 1 1104 450 266 27 0 chrX 68075509 68075693 -98574603 + L1MEg LINE L1 809 997 -5087 1 1104 225 315 41 83 chrX 68075985 68076106 -98574190 - RMER12 LTR ERVK -473 849 734 1 1104 229 274 11 56 chrX 68076724 68076813 -98573483 + L1MEg LINE L1 1120 1204 -4880 1 1104 1139 296 25 71 chrX 68077296 68077692 -98572604 - MLT1B LTR MaLR -10 380 3 1 1104 23 0 0 0 chrX 68077766 68077789 -98572507 + AT_rich Low_complexity Low_complexity 1 23 0 1 1104 475 309 19 22 chrX 68077832 68078100 -98572196 + L1MEf LINE L1 761 1027 -5215 1 1104 575 327 77 14 chrX 68078158 68078574 -98571722 + L1MEf LINE L1 1159 1600 -4642 1 1104 326 294 107 100 chrX 68078587 68079037 -98571259 + L1MEf LINE L1 1644 2096 -4146 1 1104 21 0 0 0 chrX 68079159 68079180 -98571116 + AT_rich Low_complexity Low_complexity 1 21 0 1 1104 594 297 97 0 chrX 68079257 68079452 -98570844 + B3 SINE B2 1 214 -2 1 1104 273 338 0 13 chrX 68079469 68079547 -98570749 + ID4 SINE ID 4 80 -3 1 1104 318 335 73 21 chrX 68080202 68080394 -98569902 + L1MEf LINE L1 2387 2588 -3558 1 1104 6975 99 4 5 chrX 68080399 68081596 -98568700 + L1_Mus4 LINE L1 5443 6636 0 1 1104 219 139 0 0 chrX 68081607 68081643 -98568653 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1104 591 78 0 0 chrX 68081816 68081906 -98568390 + (CA)n Simple_repeat Simple_repeat 2 91 0 1 1104 929 305 14 21 chrX 68083300 68083581 -98566715 - RMER15 LTR ERVL -15 560 282 1 1104 319 273 74 74 chrX 68083581 68083743 -98566553 - RMER15 LTR ERVL -413 162 1 1 1104 263 203 0 13 chrX 68085199 68085274 -98565022 + (CTTAA)n Simple_repeat Simple_repeat 3 76 0 1 1104 1244 274 101 20 chrX 68085292 68085649 -98564647 + MTD LTR MaLR 20 405 -14 1 1104 5606 62 6 1 chrX 68086652 68087365 -98562931 - L1_Mus1 LINE L1 0 6567 5852 1 1104 3227 57 0 2 chrX 68087351 68087757 -98562539 - L1Md_F2 LINE L1 -12 6570 6166 1 1104 3640 78 2 0 chrX 68087762 68088275 -98562021 + L1_Mm LINE L1 4844 5357 -526 1 1104 441 90 231 0 chrX 68088269 68088347 -98561949 - L1_Mus1 LINE L1 -689 5878 5783 1 1104 3330 58 36 11 chrX 68088344 68088811 -98561485 - L1Md_F2 LINE L1 0 6582 6104 1 1104 1123 76 80 23 chrX 68088816 68088992 -98561304 + L1Md_F2 LINE L1 6344 6529 -53 1 1104 25247 90 59 6 chrX 68088988 68090386 -98559910 - L1Md_F2 LINE L1 -478 6104 4733 1 1104 189 0 0 0 chrX 68090386 68090407 -98559889 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 1104 25247 106 93 10 chrX 68090407 68093210 -98557086 - L1Md_F2 LINE L1 -1151 4732 1639 1 1104 225 0 0 0 chrX 68093210 68093235 -98557061 + (TTG)n Simple_repeat Simple_repeat 3 27 0 1 1104 25247 167 63 19 chrX 68093235 68094769 -98555527 - L1Md_F2 LINE L1 -4245 1638 98 1 1104 257 286 0 0 chrX 68095071 68095155 -98555141 - L1MA5 LINE L1 -4 6296 6213 1 1104 202 156 0 62 chrX 68095300 68095348 -98554948 + (TGG)n Simple_repeat Simple_repeat 3 47 0 1 1104 978 110 0 0 chrX 68095534 68095680 -98554616 + (GAAA)n Simple_repeat Simple_repeat 3 148 0 1 1104 183 204 204 0 chrX 68096192 68096246 -98554050 + MIRc SINE MIR 168 232 -36 1 1104 226 207 17 0 chrX 68096668 68096726 -98553570 - L1_Mm LINE L1 -442 5441 5383 1 1104 1835 96 0 0 chrX 68096726 68096975 -98553321 + L1_Mus2 LINE L1 6318 6566 0 1 1104 337 218 0 0 chrX 68097056 68097134 -98553162 - L1_Rod LINE L1 -624 5223 5146 1 1104 457 321 28 5 chrX 68097571 68097787 -98552509 - L1MEc LINE L1 -6136 264 44 1 1104 396 0 0 0 chrX 68097980 68098024 -98552272 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1104 367 307 79 12 chrX 68098229 68098394 -98551902 + MER53 DNA hAT 15 190 -3 1 1104 252 100 0 0 chrX 68098697 68098737 -98551559 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 1 1104 221 211 0 0 chrX 68099155 68099193 -98551103 + MIRm SINE MIR 124 161 -115 1 1104 231 376 73 3 chrX 68099884 68100033 -98550263 - MIRm SINE MIR -109 159 3 1 1104 298 370 129 9 chrX 68100380 68100590 -98549706 + Tigger15a DNA TcMar 209 443 -272 1 1104 278 250 0 26 chrX 68101006 68101084 -98549212 + MLT1C LTR MaLR 65 140 -327 1 1104 362 284 85 66 chrX 68101092 68101303 -98548993 + MLT1C LTR MaLR 253 467 0 1 1104 1149 274 122 35 chrX 68102493 68103116 -98547180 + Lx8 LINE L1 6766 7444 -29 1 1104 36768 7 1 0 chrX 68103247 68108825 -98541471 + L1Md_A LINE L1 7 5586 -297 1 1104 8742 17 0 2 chrX 68108825 68109823 -98540473 + L1Md_A LINE L1 5587 6582 0 1 1104 3341 169 191 28 chrX 68110444 68111339 -98538957 - RMER12 LTR ERVK 0 1322 281 1 1104 747 127 15 7 chrX 68111675 68111810 -98538486 - L1_Mus3 LINE L1 -6 6632 6497 1 1104 1618 207 9 9 chrX 68111810 68112146 -98538150 - RMER12 LTR ERVK -986 336 1 1 1104 494 175 0 119 chrX 68112212 68112349 -98537947 + B1_Mur2 SINE Alu 2 120 0 1 1104 864 321 67 9 chrX 68112903 68113249 -98537047 + MTEb LTR MaLR 5 370 -9 1 1104 451 0 34 0 chrX 68113367 68113426 -98536870 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 1104 243 125 0 0 chrX 68113426 68113466 -98536830 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 1104 35695 45 3 14 chrX 68113466 68118993 -98531303 + L1Md_T LINE L1 30 5589 -297 1 1104 8680 29 0 0 chrX 68118993 68119989 -98530307 + L1Md_T LINE L1 5590 6585 0 1 1104 2742 34 3 0 chrX 68120123 68120446 -98529850 - L1Md_F2 LINE L1 0 6582 6259 1 1104 1134 69 29 6 chrX 68120476 68120650 -98529646 + L1_Mus3 LINE L1 6461 6638 0 1 1104 605 285 92 15 chrX 68120656 68120852 -98529444 + MTE-int LTR MaLR 172 382 -1198 1 1104 237 326 39 0 chrX 68120906 68121035 -98529261 - HAL1b LINE L1 -22 1987 1854 1 1104 259 316 96 13 chrX 68121203 68121360 -98528936 - L1M5 LINE L1 -640 5484 5315 1 1104 351 289 63 48 chrX 68121516 68121723 -98528573 - MLT1C LTR MaLR -221 246 37 1 1104 870 182 0 0 chrX 68123606 68123749 -98526547 - B1_Mur3 SINE Alu 0 149 7 1 1104 195 295 12 49 chrX 68123868 68123950 -98526346 - MIRb SINE MIR -69 199 121 1 1104 524 270 152 5 chrX 68124045 68124242 -98526054 + L1MB5 LINE L1 5941 6166 -8 1 1104 3198 248 65 24 chrX 68124276 68125321 -98524975 - Charlie1a DNA MER1_type -50 1405 318 1 1104 2878 202 40 60 chrX 68125322 68125660 -98524636 + Lx7 LINE L1 7032 7362 -334 1 1104 212 0 0 35 chrX 68125660 68125689 -98524607 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 1 1104 2878 202 40 60 chrX 68125689 68126029 -98524267 + Lx7 LINE L1 7363 7696 0 1 1104 391 272 29 0 chrX 68126799 68126902 -98523394 + B4 SINE B4 106 211 -81 1 1104 2860 234 52 13 chrX 68126903 68127505 -98522791 + Lx5 LINE L1 6425 7049 -1 1 1104 190 311 82 0 chrX 68128519 68128580 -98521716 + MIR SINE MIR 60 125 -83 1 1104 1168 37 0 0 chrX 68128683 68128819 -98521477 + B1_Mus2 SINE Alu 1 136 -11 1 1104 408 20 0 0 chrX 68128820 68128869 -98521427 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1 1104 290 24 48 0 chrX 68128985 68129027 -98521269 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 2 1104 1128 65 0 0 chrX 68129027 68129165 -98521131 - B1_Mus2 SINE Alu -9 138 1 2 1104 1072 257 77 48 chrX 68129461 68129853 -98520443 + RMER5 LTR ERV1 112 514 -20 2 1104 423 0 0 0 chrX 68129858 68129905 -98520391 + (TTTTG)n Simple_repeat Simple_repeat 1 47 0 2 1104 280 257 27 45 chrX 68129930 68130040 -98520256 + MLT1D LTR MaLR 407 505 0 2 1104 1326 91 21 0 chrX 68131808 68131995 -98518301 - B2_Mm1a SINE B2 -2 191 1 2 1104 1493 247 44 30 chrX 68132001 68132406 -98517890 - MTD LTR MaLR -8 411 1 2 1104 395 270 179 9 chrX 68133349 68133573 -98516723 - MLT2C2 LTR ERVL -27 437 176 2 1104 1093 79 4 9 chrX 68133580 68133811 -98516485 + (TC)n Simple_repeat Simple_repeat 1 229 0 2 1104 291 331 50 29 chrX 68134014 68134154 -98516142 + B1_Mus1 SINE Alu 1 143 -5 2 1104 517 290 6 11 chrX 68134030 68134171 -98516125 + ID_B1 SINE B4 96 234 -58 2 1104 486 0 0 0 chrX 68135808 68135862 -98514434 + (CTG)n Simple_repeat Simple_repeat 1 54 0 2 1104 2380 231 91 12 chrX 68137483 68138124 -98512172 + L1MB7 LINE L1 5381 6071 -113 2 1104 313 217 14 0 chrX 68138195 68138264 -98512032 + ID4 SINE ID 3 72 -11 2 1104 204 254 36 0 chrX 68138264 68138319 -98511977 + GA-rich Low_complexity Low_complexity 4 60 0 2 1104 2808 67 3 0 chrX 68139422 68139779 -98510517 - L1_Mus1 LINE L1 -1 6566 6209 2 1104 992 179 36 59 chrX 68139967 68140187 -98510109 - B3 SINE B2 -1 215 1 2 1104 253 240 13 13 chrX 68140187 68140263 -98510033 - MLT1E3 LTR MaLR -460 164 89 2 1104 560 198 61 35 chrX 68140859 68140974 -98509322 + RSINE1 SINE B4 48 165 0 2 1104 304 130 29 0 chrX 68140974 68141043 -98509253 + (TAAA)n Simple_repeat Simple_repeat 2 72 0 2 1104 6678 42 1 11 chrX 68141139 68141952 -98508344 + L1Md_F2 LINE L1 5760 6564 -18 2 1104 210 37 0 0 chrX 68141952 68141979 -98508317 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 1104 691 196 0 20 chrX 68142360 68142506 -98507790 - B1F SINE Alu 0 149 7 2 1104 932 167 57 9 chrX 68145886 68146097 -98504199 + RMER13A LTR ERVK 5 328 -580 2 1104 1861 210 64 3 chrX 68146178 68146570 -98503726 - Lx9 LINE L1 -157 7487 7072 2 1104 394 356 110 19 chrX 68146645 68147464 -98502832 - L1M5 LINE L1 -571 5669 4773 2 1104 1054 209 24 5 chrX 68149651 68149858 -98500438 + B3 SINE B2 5 215 -1 2 1104 183 310 58 58 chrX 68149897 68150034 -98500262 + L2a LINE L2 3290 3426 0 2 1104 247 296 11 22 chrX 68150472 68150562 -98499734 + MIR3 SINE MIR 114 202 -6 2 1104 25 0 0 0 chrX 68154804 68154829 -98495467 + GC_rich Low_complexity Low_complexity 1 25 0 2 1104 2846 66 11 0 chrX 68156312 68156676 -98493620 - L1Md_T LINE L1 0 6582 6215 2 17 279 306 82 86 chrX 68157262 68157519 -98492777 - MLT1C LTR MaLR -102 365 110 2 1105 367 326 100 20 chrX 68157586 68157667 -98492629 + Lx8 LINE L1 6716 6799 -674 2 1105 432 0 0 0 chrX 68157667 68157715 -98492581 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 1105 367 326 100 20 chrX 68157715 68157833 -98492463 + Lx8 LINE L1 6800 6931 -542 2 1105 380 213 171 77 chrX 68157853 68157970 -98492326 + Lx8 LINE L1 7089 7216 -257 2 1105 362 281 41 54 chrX 68158911 68159058 -98491238 - MLT1A LTR MaLR -196 178 34 2 1105 805 155 7 27 chrX 68159761 68159907 -98490389 + B1_Mus1 SINE Alu 6 148 0 2 1105 518 323 93 41 chrX 68160021 68160386 -98489910 - MLT1D LTR MaLR -63 404 1 2 1105 638 299 143 50 chrX 68163559 68163978 -98486318 - MLT1D LTR MaLR -16 489 32 2 1105 185 385 25 19 chrX 68163992 68164151 -98486145 + MIRc SINE MIR 70 229 -39 2 1105 432 0 0 0 chrX 68164398 68164446 -98485850 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1105 1248 291 108 37 chrX 68164777 68165526 -98484770 + L1M5 LINE L1 3817 4618 -1528 2 1105 769 221 0 7 chrX 68165807 68165953 -98484343 - B1_Mur1 SINE Alu -2 147 3 2 1105 675 117 0 0 chrX 68166003 68166106 -98484190 + (CA)n Simple_repeat Simple_repeat 2 104 0 2 1105 239 95 0 45 chrX 68166106 68166149 -98484147 + (TATG)n Simple_repeat Simple_repeat 2 43 0 2 1105 226 229 78 78 chrX 68167099 68167189 -98483107 - ORR1A3-int LTR MaLR -614 1349 1260 2 1105 529 165 17 9 chrX 68167322 68167438 -98482858 + GA-rich Low_complexity Low_complexity 4 120 0 2 1105 300 284 156 0 chrX 68167440 68167581 -98482715 + L1M5 LINE L1 5277 5439 -734 2 1105 303 416 48 32 chrX 68167642 68167893 -98482403 + LTR16A LTR ERVL 35 289 -162 2 1105 292 291 50 62 chrX 68168078 68168239 -98482057 + L1M5 LINE L1 5509 5667 -506 2 1105 375 41 0 0 chrX 68168551 68168600 -98481696 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1105 225 312 20 51 chrX 68169844 68169942 -98480354 - MIR SINE MIR -76 186 92 2 1105 479 321 133 0 chrX 68170045 68170210 -98480086 + MER5A DNA MER1_type 2 188 -1 2 1105 3887 12 0 0 chrX 68171840 68172252 -98478044 - L1Md_A LINE L1 -1 6581 6170 2 1105 424 210 186 39 chrX 68172295 68172424 -98477872 + MLT2B4 LTR ERVL 85 232 -324 2 1105 1458 137 72 100 chrX 68172424 68172440 -98477856 - Lx5 LINE L1 -800 6250 6237 2 1105 3312 79 10 0 chrX 68172440 68172843 -98477453 + MTB_Mm LTR MaLR 1 407 0 2 1105 1458 137 72 100 chrX 68172843 68173175 -98477121 - Lx5 LINE L1 -814 6236 5912 2 1105 4555 177 29 3 chrX 68173178 68173943 -98476353 + Lx5 LINE L1 6251 7035 -15 2 1105 321 197 0 0 chrX 68173943 68174014 -98476282 + (CAGA)n Simple_repeat Simple_repeat 2 72 0 2 1105 791 270 159 3 chrX 68174230 68174532 -98475764 - Charlie1b DNA MER1_type -173 350 2 2 1105 332 306 56 36 chrX 68174532 68174783 -98475513 - L1MEg LINE L1 -4288 1796 1541 2 1105 264 295 113 2 chrX 68175181 68175275 -98475021 - PB1D10 SINE Alu -12 105 3 2 1105 468 311 62 5 chrX 68175328 68175522 -98474774 + MER3 DNA MER1_type 5 209 0 2 1105 1703 198 216 18 chrX 68177366 68177824 -98472472 + RMER15 LTR ERVL 27 575 0 2 1105 1007 105 26 0 chrX 68180627 68180779 -98469517 - RMER19A LTR ERVK 0 737 582 2 1105 12096 33 1 1 chrX 68180809 68182895 -98467401 - L1Md_F2 LINE L1 -3 6579 4494 2 1105 4102 113 19 0 chrX 68182896 68183480 -98466816 - RMER19A LTR ERVK -142 595 1 2 1105 1763 61 0 0 chrX 68184450 68184662 -98465634 + L1Md_F2 LINE L1 6359 6570 -12 2 1105 530 152 16 38 chrX 68184730 68184914 -98465382 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1105 566 129 48 12 chrX 68184930 68185095 -98465201 + (TG)n Simple_repeat Simple_repeat 1 171 0 2 1105 534 70 0 0 chrX 68186111 68186182 -98464114 + (TTCTG)n Simple_repeat Simple_repeat 2 72 0 2 1105 894 254 13 17 chrX 68186192 68186424 -98463872 - MLT1B LTR MaLR -126 264 34 2 1105 1387 222 88 12 chrX 68187979 68188321 -98461975 - ORR1D1 LTR MaLR 0 374 7 2 1105 524 277 6 49 chrX 68188557 68188720 -98461576 - L1MA4A LINE L1 -385 5918 5763 2 1105 343 288 131 47 chrX 68189742 68190125 -98460171 + MER113 DNA MER1_type 44 458 -63 2 1105 506 240 75 15 chrX 68190194 68190397 -98459899 + L1MB7 LINE L1 5197 5406 -768 2 1105 279 348 51 0 chrX 68190926 68191044 -98459252 - RMER15 LTR ERVL 0 575 452 2 1105 302 360 13 20 chrX 68191223 68191373 -98458923 - Lx8 LINE L1 -297 7176 7028 2 1105 2192 119 0 76 chrX 68191596 68191687 -98458609 - ORR1A2 LTR MaLR 0 327 263 2 1105 2226 83 6 60 chrX 68191687 68192006 -98458290 - L1_Mus3 LINE L1 -12 6626 6325 2 1105 2192 119 0 76 chrX 68192006 68192268 -98458028 - ORR1A2 LTR MaLR -65 262 1 2 1105 8977 154 66 25 chrX 68192268 68194005 -98456291 - ORR1A2-int LTR MaLR 0 1963 156 2 1105 1526 103 25 8 chrX 68193974 68194210 -98456086 - ORR1A2 LTR MaLR -87 240 1 2 1105 238 240 53 0 chrX 68194210 68194285 -98456011 + L1MB7 LINE L1 5695 5773 -405 2 1105 260 273 224 15 chrX 68194304 68194572 -98455724 + L1MB7 LINE L1 5813 6136 -48 2 1105 226 347 178 5 chrX 68194800 68194991 -98455305 + MIRb SINE MIR 32 255 -13 2 1105 1024 227 19 5 chrX 68195807 68196015 -98454281 - B3 SINE B2 -4 212 2 2 1105 684 42 0 11 chrX 68196122 68196217 -98454079 + L1Md_F2 LINE L1 6477 6570 -12 2 1105 22 35 0 0 chrX 68196257 68196286 -98454010 + AT_rich Low_complexity Low_complexity 1 29 0 2 1105 632 320 39 27 chrX 68196298 68196635 -98453661 - L1MB5 LINE L1 -268 5906 5566 2 1105 2683 79 75 45 chrX 68197219 68197618 -98452678 + IAPLTR2a LTR ERVK 1 411 0 2 1105 220 342 96 9 chrX 68200049 68200164 -98450132 - MIRb SINE MIR -104 164 40 2 1105 251 215 45 15 chrX 68200929 68200995 -98449301 + MIRb SINE MIR 155 222 -46 2 1105 292 234 80 9 chrX 68201063 68201175 -98449121 - L2 LINE L2 -660 2759 2640 2 1105 228 232 0 18 chrX 68201191 68201248 -98449048 + GA-rich Low_complexity Low_complexity 2 57 0 2 1105 186 229 0 0 chrX 68201403 68201438 -98448858 - L2 LINE L2 -1105 2314 2280 2 1105 208 270 76 34 chrX 68202135 68202254 -98448042 - MIRc SINE MIR -38 230 107 2 1105 234 250 15 45 chrX 68202421 68202488 -98447808 + MER63D DNA AcHobo 309 373 -688 2 1105 2327 72 7 19 chrX 68203973 68204283 -98446013 + L1Md_F2 LINE L1 6277 6582 0 2 1105 722 243 0 27 chrX 68204843 68204991 -98445305 - RSINE1 SINE B4 -19 146 3 2 1105 591 277 14 0 chrX 68205806 68205947 -98444349 - B1_Mur1 SINE Alu -5 144 2 2 1105 259 331 79 40 chrX 68207423 68207549 -98442747 - MIRb SINE MIR -132 136 6 2 1105 2917 63 0 0 chrX 68207858 68208225 -98442071 - L1_Mus2 LINE L1 -430 6136 5770 2 1105 3621 66 0 42 chrX 68208225 68208682 -98441614 + L1_Mus2 LINE L1 6128 6565 -1 2 1105 1440 291 101 55 chrX 68208832 68209204 -98441092 + Lx8 LINE L1 6823 7216 -257 2 1105 1539 139 9 0 chrX 68209204 68209427 -98440869 - URR1B DNA MER1_type 0 225 1 2 1105 1440 291 101 55 chrX 68209427 68209676 -98440620 + Lx8 LINE L1 7217 7473 0 2 1105 28 0 0 0 chrX 68209687 68209715 -98440581 + AT_rich Low_complexity Low_complexity 1 28 0 2 1105 673 299 50 54 chrX 68210389 68210668 -98439628 + B4A SINE B4 3 280 -12 2 1105 206 306 42 60 chrX 68210941 68211133 -98439163 + L2b LINE L2 2977 3159 -228 2 1105 1220 280 9 31 chrX 68211375 68211692 -98438604 - MTEb LTR MaLR -8 371 62 2 1105 365 243 0 0 chrX 68211816 68211886 -98438410 + ID4 SINE ID 11 80 -3 2 1105 968 228 127 19 chrX 68211948 68212208 -98438088 - MTD LTR MaLR -129 290 3 2 1105 2557 286 72 35 chrX 68212333 68213290 -98437006 + Lx9 LINE L1 6320 7311 -333 2 1105 1994 212 60 50 chrX 68213292 68213788 -98436508 - RMER19C LTR ERVK 0 611 111 3 1105 601 280 126 11 chrX 68213836 68214114 -98436182 + Lx9 LINE L1 7308 7617 -27 2 1105 1224 68 0 0 chrX 68214120 68214254 -98436042 + B1_Mm SINE Alu 1 134 -13 3 1105 252 0 0 0 chrX 68214254 68214282 -98436014 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 3 1105 1224 68 0 0 chrX 68214282 68214294 -98436002 + B1_Mm SINE Alu 135 146 -1 3 1105 25 31 0 0 chrX 68214633 68214665 -98435631 + AT_rich Low_complexity Low_complexity 1 32 0 3 1105 416 19 19 0 chrX 68214956 68215009 -98435287 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 1105 216 0 0 0 chrX 68215009 68215032 -98435264 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1105 579 66 0 0 chrX 68215032 68215107 -98435189 + (GGGAGA)n Simple_repeat Simple_repeat 4 79 0 3 1105 568 300 8 0 chrX 68215107 68215237 -98435059 - B1_Mur1 SINE Alu -17 132 2 3 1105 1223 280 57 38 chrX 68215305 68215836 -98434460 + L1MDb LINE L1 981 1521 -5019 3 1105 346 310 114 9 chrX 68216125 68216239 -98434057 - MLT1A0 LTR MaLR -239 126 1 3 1105 323 308 162 44 chrX 68216269 68216812 -98433484 + L1MDb LINE L1 1814 2420 -4213 3 1105 395 228 11 0 chrX 68216808 68216900 -98433396 + L1MDb LINE L1 2567 2659 -3878 3 1105 285 100 0 0 chrX 68217022 68217072 -98433224 + (TC)n Simple_repeat Simple_repeat 2 51 0 3 1105 195 42 0 0 chrX 68217072 68217096 -98433200 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1105 1429 217 163 37 chrX 68217097 68217581 -98432715 + L1MDb LINE L1 2653 3197 -3340 3 1105 1441 279 119 21 chrX 68217606 68218481 -98431815 + L1MDb LINE L1 3367 4327 -2210 3 1105 474 311 171 34 chrX 68218678 68218917 -98431379 + B4A SINE B4 9 291 -1 3 1105 386 311 66 12 chrX 68218959 68219125 -98431171 + L1MC LINE L1 5127 5301 -845 3 1105 722 89 5 0 chrX 68219164 68219263 -98431033 + L1MD2 LINE L1 5500 5636 -543 3 1105 8755 37 5 1 chrX 68219263 68220254 -98430042 + L1Md_F3 LINE L1 5587 6581 -3 3 1105 500 297 48 3 chrX 68220254 68220474 -98429822 + L1MD2 LINE L1 5637 5872 -487 3 1105 318 270 286 33 chrX 68220581 68220826 -98429470 + L1MD2 LINE L1 6053 6359 0 3 1105 327 348 117 19 chrX 68220851 68221065 -98429231 + MIRb SINE MIR 17 251 -17 3 1105 275 293 28 162 chrX 68221548 68221727 -98428569 - MLT1A1 LTR MaLR -252 156 2 3 1105 551 253 32 42 chrX 68222938 68223128 -98427168 + L1MD LINE L1 4005 4192 -1954 3 1105 643 104 19 0 chrX 68223128 68223234 -98427062 + (GAAA)n Simple_repeat Simple_repeat 1 108 0 3 1105 410 307 134 10 chrX 68223234 68223533 -98426763 + L1MD LINE L1 4181 4516 -1630 3 1105 781 299 70 101 chrX 68223533 68223737 -98426559 + MTD LTR MaLR 1 207 -212 3 1105 815 227 87 5 chrX 68223737 68223932 -98426364 + B3 SINE B2 1 211 -5 3 1105 781 299 70 101 chrX 68223932 68223960 -98426336 + MTD LTR MaLR 208 233 -186 3 1105 779 80 9 0 chrX 68223960 68224072 -98426224 + (GGAA)n Simple_repeat Simple_repeat 4 116 0 3 1105 781 299 70 101 chrX 68224072 68224185 -98426111 + MTD LTR MaLR 234 353 -66 3 1105 5344 86 8 1 chrX 68224185 68224895 -98425401 + L1_Mus1 LINE L1 5850 6564 -3 3 1105 781 299 70 101 chrX 68224895 68224964 -98425332 + MTD LTR MaLR 354 404 -15 3 1105 265 272 12 0 chrX 68225121 68225202 -98425094 + L1MD LINE L1 4858 4939 -1207 3 1105 4827 163 20 56 chrX 68225770 68226997 -98423299 - Lx3B LINE L1 -14 6986 5870 3 1105 295 283 15 38 chrX 68227087 68227219 -98423077 + L1MD1 LINE L1 5395 5523 -836 3 1105 541 264 21 0 chrX 68227307 68227451 -98422845 - MTD LTR MaLR -6 413 267 3 1105 378 0 0 0 chrX 68227455 68227497 -98422799 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 3 1105 321 89 0 0 chrX 68227502 68227547 -98422749 + (CATATA)n Simple_repeat Simple_repeat 1 45 0 3 1105 636 254 80 18 chrX 68227550 68227732 -98422564 - MTD LTR MaLR -229 190 1 3 1105 411 229 86 31 chrX 68227732 68227881 -98422415 + Lx7 LINE L1 5591 5774 -526 3 1105 737 310 14 24 chrX 68228184 68228478 -98421818 + L1MD1 LINE L1 5600 5890 -352 3 1105 1125 253 54 4 chrX 68228481 68228518 -98421778 + B4A SINE B4 1 37 -255 3 1105 180 0 0 0 chrX 68228518 68228538 -98421758 + (CATG)n Simple_repeat Simple_repeat 1 20 0 3 1105 1125 253 54 4 chrX 68228538 68228778 -98421518 + B4A SINE B4 38 291 -1 3 1105 700 255 0 31 chrX 68228864 68229026 -98421270 - RSINE1 SINE B4 -7 158 2 3 1105 515 183 26 13 chrX 68229075 68229230 -98421066 + CT-rich Low_complexity Low_complexity 6 162 0 3 1105 322 332 145 44 chrX 68229235 68229484 -98420812 + MLT2B1 LTR ERVL 77 350 -170 3 1105 436 261 147 72 chrX 68229556 68229890 -98420406 - ORR1E LTR MaLR 0 359 1 3 1105 240 149 0 0 chrX 68229924 68229971 -98420325 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 3 1105 574 244 11 28 chrX 68230144 68230325 -98419971 - L1MC5 LINE L1 -760 7201 7024 3 1105 231 182 72 43 chrX 68230487 68230556 -98419740 - L1MC5 LINE L1 -920 7041 6971 3 1105 261 0 0 0 chrX 68230632 68230661 -98419635 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1105 490 273 66 72 chrX 68230689 68231036 -98419260 - L1MC5 LINE L1 -1001 6960 6616 3 1105 708 87 19 10 chrX 68232308 68232412 -98417884 - L1_Mur1 LINE L1 -1303 4583 4479 3 1105 3200 67 0 0 chrX 68232410 68232828 -98417468 + L1_Mur1 LINE L1 4981 5398 -488 3 1105 693 253 47 34 chrX 68234258 68234491 -98415805 - Lx9 LINE L1 -205 7439 7204 3 1105 272 270 33 11 chrX 68235021 68235111 -98415185 - MIR SINE MIR -92 170 79 3 1105 253 213 0 32 chrX 68235113 68235176 -98415120 + L1MD2 LINE L1 5771 5831 -528 3 1105 377 253 13 0 chrX 68235177 68235256 -98415040 + ID SINE ID 2 81 -143 3 1105 252 240 191 9 chrX 68235258 68235363 -98414933 + L1MD2 LINE L1 6231 6354 -5 3 1105 288 327 0 38 chrX 68235572 68235629 -98414667 + B3A SINE B2 92 148 -50 3 1105 312 91 0 0 chrX 68235629 68235673 -98414623 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1105 288 335 8 35 chrX 68235673 68235735 -98414561 + B3A SINE B2 147 210 -6 3 1105 336 278 16 71 chrX 68235748 68235930 -98414366 + Charlie12 DNA MER1_type 1097 1268 -1605 3 1105 225 122 0 24 chrX 68235964 68236006 -98414290 + Charlie12 DNA MER1_type 1389 1429 -1444 3 1105 1401 234 13 26 chrX 68236006 68236313 -98413983 + Lx5 LINE L1 6745 7047 -3 3 1105 493 248 57 0 chrX 68236397 68236538 -98413758 + Charlie12 DNA MER1_type 1399 1547 -1326 3 1105 4867 137 32 21 chrX 68236671 68237721 -98412575 + L1Md_A LINE L1 5001 5803 -44 3 1105 9189 3 0 0 chrX 68237721 68238717 -98411579 + L1Md_A LINE L1 5587 6582 0 3 1105 1154 15 23 0 chrX 68238717 68238849 -98411447 + L1Md_A LINE L1 5452 5586 -297 3 1105 8937 13 1 0 chrX 68238850 68239843 -98410453 + L1Md_A LINE L1 5588 6581 -1 3 1105 28 48 0 0 chrX 68239843 68239885 -98410411 + AT_rich Low_complexity Low_complexity 1 42 0 3 1105 289 281 8 15 chrX 68240212 68240342 -98409954 + Charlie12 DNA MER1_type 1537 1665 -1208 3 1105 421 218 279 50 chrX 68240342 68240521 -98409775 - Lx8 LINE L1 -213 7260 7041 3 1105 238 211 105 0 chrX 68240543 68240600 -98409696 + RSINE1 SINE B4 84 146 -19 3 1105 186 71 0 0 chrX 68240614 68240642 -98409654 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 1105 231 61 0 0 chrX 68240654 68240687 -98409609 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1105 228 252 60 120 chrX 68240695 68240812 -98409484 + Charlie12 DNA MER1_type 1736 1845 -1028 3 1105 1356 220 98 15 chrX 68240798 68241208 -98409088 + Charlie12 DNA MER1_type 2430 2873 0 3 1105 477 0 0 0 chrX 68241348 68241401 -98408895 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 1105 30 0 0 0 chrX 68241458 68241488 -98408808 + AT_rich Low_complexity Low_complexity 1 30 0 3 1105 288 307 135 28 chrX 68241505 68241646 -98408650 - RSINE1 SINE B4 -6 159 4 3 1105 265 306 57 65 chrX 68241916 68242161 -98408135 - HAL1 LINE L1 -335 2172 1930 3 1105 893 308 137 15 chrX 68242168 68242818 -98407478 - HAL1 LINE L1 -697 1810 1082 3 1105 360 0 0 0 chrX 68242818 68242858 -98407438 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 1105 1062 254 164 11 chrX 68242912 68243334 -98406962 - L1MC1 LINE L1 -11 6322 5844 3 1105 416 256 107 0 chrX 68243357 68243478 -98406818 - MLT1D LTR MaLR -48 457 324 3 1105 473 333 58 30 chrX 68243600 68243962 -98406334 - HAL1 LINE L1 -1609 898 527 3 1105 425 326 13 65 chrX 68245287 68245441 -98404855 + RSINE1 SINE B4 2 147 -18 3 1105 7501 51 1 25 chrX 68245482 68246251 -98404045 - L1_Mm LINE L1 -1200 4683 3938 3 1105 3389 58 0 38 chrX 68246251 68246703 -98403593 - L1Md_F2 LINE L1 -12 6570 6136 3 1105 7501 51 1 25 chrX 68246703 68246912 -98403384 - L1_Mm LINE L1 -1946 3937 3729 3 1105 512 18 0 0 chrX 68246911 68246967 -98403329 + L1Md_F2 LINE L1 5531 5586 -297 3 1105 8160 55 0 4 chrX 68246968 68247967 -98402329 + L1Md_F2 LINE L1 5588 6582 0 3 1105 522 300 83 21 chrX 68248039 68248281 -98402015 + RMER15 LTR ERVL 304 560 -15 3 1105 447 19 0 0 chrX 68249749 68249801 -98400495 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 1105 567 92 0 0 chrX 68249801 68249887 -98400409 + (TG)n Simple_repeat Simple_repeat 2 88 0 3 1105 209 318 93 28 chrX 68250059 68250168 -98400128 + MIRb SINE MIR 51 170 -98 3 1105 747 266 110 20 chrX 68251091 68251337 -98398959 + B4A SINE B4 2 269 -23 3 1105 401 54 18 0 chrX 68251338 68251394 -98398902 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 1105 198 0 0 0 chrX 68251558 68251580 -98398716 + (TTG)n Simple_repeat Simple_repeat 3 24 0 3 1105 225 0 0 0 chrX 68251580 68251605 -98398691 + (ATG)n Simple_repeat Simple_repeat 2 26 0 3 1105 1082 217 45 65 chrX 68251680 68252080 -98398216 + Lx9 LINE L1 7247 7638 -6 3 1105 344 292 19 102 chrX 68252074 68252280 -98398016 - L1MEb LINE L1 -5876 194 6 3 1105 343 271 39 52 chrX 68252823 68252988 -98397308 - MLT1A LTR MaLR -213 195 35 3 1105 211 357 0 0 chrX 68253094 68253164 -98397132 - BC1_Mm scRNA scRNA -81 71 2 3 1105 450 259 28 7 chrX 68253172 68253316 -98396980 - B1F SINE Alu -1 148 2 3 1105 771 57 0 0 chrX 68254108 68254213 -98396083 + (TG)n Simple_repeat Simple_repeat 2 106 0 3 1105 858 276 122 19 chrX 68254244 68254514 -98395782 + Lx8 LINE L1 6289 6586 -887 3 1105 1133 280 235 19 chrX 68254535 68255053 -98395243 + Lx8 LINE L1 6793 7422 -51 3 1105 419 264 49 21 chrX 68255654 68255797 -98394499 + RSINE1 SINE B4 2 148 -17 3 1105 27 49 0 0 chrX 68255817 68255858 -98394438 + AT_rich Low_complexity Low_complexity 1 41 0 3 1105 337 281 151 29 chrX 68256499 68256671 -98393625 + MLT1D LTR MaLR 1 193 -312 3 1105 437 269 29 0 chrX 68257947 68258051 -98392245 - Lx8 LINE L1 -523 6950 6844 3 1105 683 304 76 25 chrX 68258433 68258560 -98391736 + B4 SINE B4 2 124 -168 3 1105 549 0 0 0 chrX 68258560 68258621 -98391675 + (GA)n Simple_repeat Simple_repeat 1 61 0 3 1105 683 304 76 25 chrX 68258621 68258770 -98391526 + B4 SINE B4 125 291 -1 3 1105 342 98 0 0 chrX 68258780 68258831 -98391465 + (CATA)n Simple_repeat Simple_repeat 4 54 0 3 1105 248 247 118 46 chrX 68259987 68260140 -98390156 - MLT1C LTR MaLR -87 380 217 3 1105 558 41 0 0 chrX 68260597 68260670 -98389626 + (TG)n Simple_repeat Simple_repeat 1 73 0 3 1105 284 302 47 65 chrX 68261344 68261514 -98388782 - MIRb SINE MIR -77 191 25 3 1105 364 222 130 10 chrX 68261565 68261665 -98388631 + B1F SINE Alu 12 123 -26 3 1105 735 100 33 13 chrX 68261682 68261834 -98388462 + (CAGAGA)n Simple_repeat Simple_repeat 2 156 0 3 1105 552 68 0 0 chrX 68261834 68261907 -98388389 + (GGAA)n Simple_repeat Simple_repeat 1 73 0 3 1105 476 101 11 0 chrX 68262814 68262903 -98387393 + (TC)n Simple_repeat Simple_repeat 1 90 0 3 1105 252 0 0 0 chrX 68262903 68262931 -98387365 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 1105 233 358 0 0 chrX 68263706 68263787 -98386509 + MIR SINE MIR 79 159 -103 3 1105 302 120 26 26 chrX 68264179 68264256 -98386040 + CT-rich Low_complexity Low_complexity 2 78 0 3 1105 244 272 10 42 chrX 68264418 68264514 -98385782 + MIRb SINE MIR 108 200 -68 3 1105 475 321 52 10 chrX 68264521 68264713 -98385583 + L1MDa LINE L1 29 228 -6405 4 1105 570 289 108 31 chrX 68264731 68265134 -98385162 + L1MDa LINE L1 974 1433 -5107 4 1105 587 108 0 11 chrX 68265147 68265241 -98385055 + (GGA)n Simple_repeat Simple_repeat 3 95 0 4 1105 748 262 186 19 chrX 68265241 68265661 -98384635 + L1MDa LINE L1 1452 1941 -4692 4 1105 542 282 0 0 chrX 68266082 68266213 -98384083 + ID_B1 SINE B4 87 217 -7 4 1105 1368 67 0 0 chrX 68266326 68266506 -98383790 + (TCC)n Simple_repeat Simple_repeat 1 180 0 4 1105 7307 103 19 8 chrX 68266544 68267775 -98382521 - Lx LINE L1 -2 6652 5409 4 1105 572 136 11 26 chrX 68267766 68267883 -98382413 + Lx LINE L1 5314 5458 -833 4 1105 602 26 13 0 chrX 68268031 68268107 -98382189 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 4 1105 219 139 0 0 chrX 68268832 68268868 -98381428 + (TGG)n Simple_repeat Simple_repeat 1 36 0 4 1105 585 105 0 0 chrX 68270054 68270140 -98380156 + (GA)n Simple_repeat Simple_repeat 1 86 0 4 1105 1234 275 30 27 chrX 68270162 68270532 -98379764 - MTEb LTR MaLR -6 373 3 4 1105 222 287 0 33 chrX 68270774 68270864 -98379432 - MIRc SINE MIR -118 150 64 4 1105 302 284 165 0 chrX 68273419 68273528 -98376768 - B1F1 SINE Alu -22 127 1 4 1105 272 303 19 78 chrX 68273828 68273982 -98376314 - LTR16E1 LTR ERVL -59 479 335 4 1105 219 227 258 0 chrX 68274228 68274248 -98376048 + ID4 SINE ID 1 80 0 4 1105 229 186 47 0 chrX 68274248 68274291 -98376005 + ID SINE ID 39 83 -141 4 1105 289 220 0 0 chrX 68274443 68274502 -98375794 - MER5A DNA MER1_type 0 189 131 4 1105 555 280 11 69 chrX 68274513 68274701 -98375595 + MER45A DNA Tip100 2 178 0 4 1105 196 388 0 0 chrX 68274704 68274789 -98375507 - MER5A DNA MER1_type -66 123 39 4 1105 4908 102 16 9 chrX 68274848 68275571 -98374725 + L1Md_F2 LINE L1 5880 6582 0 4 1105 1098 217 0 0 chrX 68275629 68275832 -98374464 + B3 SINE B2 4 206 -10 4 1105 845 151 0 7 chrX 68275852 68276005 -98374291 + GA-rich Low_complexity Low_complexity 3 154 0 4 1105 184 315 101 0 chrX 68276245 68276334 -98373962 + MIRb SINE MIR 80 177 -91 4 1105 189 273 0 22 chrX 68276405 68276450 -98373846 + L2c LINE L2 3270 3313 -74 4 1105 1026 247 20 26 chrX 68277912 68278215 -98372081 - MLT1D LTR MaLR 0 505 205 4 1105 378 259 185 45 chrX 68279661 68279883 -98370413 + RMER15 LTR ERVL 320 572 -3 4 1105 291 114 0 0 chrX 68280013 68280057 -98370239 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 4 1105 215 296 62 62 chrX 68285396 68285540 -98364756 + MIR SINE MIR 5 148 -114 4 1105 861 298 123 0 chrX 68285577 68285919 -98364377 + MLT2C1 LTR ERVL 14 397 0 4 138 553 231 6 106 chrX 68288471 68288578 -98361718 + B4 SINE B4 1 93 -199 4 1106 1246 56 6 11 chrX 68288578 68288759 -98361537 + (TGG)n Simple_repeat Simple_repeat 1 180 0 4 1106 553 231 6 106 chrX 68288759 68288811 -98361485 + B4 SINE B4 94 144 -148 4 1106 909 268 103 13 chrX 68288815 68289125 -98361171 + L1M2 LINE L1 5417 5754 -546 4 1106 848 230 58 113 chrX 68289127 68289455 -98360841 - ORR1C2 LTR MaLR -64 320 11 4 1106 321 306 78 57 chrX 68289568 68289795 -98360501 - ERVL-B4-int LTR ERVL -1167 4547 4300 4 1106 533 354 0 0 chrX 68290130 68290277 -98360019 + RSINE1 SINE B4 9 155 -10 4 1106 608 300 106 11 chrX 68290361 68290634 -98359662 + RMER15 LTR ERVL 272 570 -5 4 1106 688 308 25 127 chrX 68290857 68291259 -98359037 - MLT1B LTR MaLR -2 388 28 4 1106 290 389 59 5 chrX 68291704 68291926 -98358370 - ERVL-B4-int LTR ERVL -2309 3358 3125 4 1106 326 292 107 16 chrX 68293437 68293559 -98356737 - MIRb SINE MIR -74 194 62 4 1106 750 312 188 17 chrX 68294232 68294361 -98355935 + MLT1C-int LTR MaLR 960 1091 -280 4 1106 1320 94 16 5 chrX 68294361 68294554 -98355742 - L1_Mus1 LINE L1 0 6567 6373 4 1106 750 312 188 17 chrX 68294554 68294776 -98355520 + MLT1C-int LTR MaLR 1092 1370 -1 4 1106 554 291 166 46 chrX 68294778 68295189 -98355107 + MLT1C LTR MaLR 4 463 -4 4 1106 1396 131 4 122 chrX 68295410 68295663 -98354633 - URR1B DNA MER1_type 0 225 3 4 1106 511 308 47 24 chrX 68296101 68296314 -98353982 + ID_B1 SINE B4 1 218 -6 4 1106 181 337 20 10 chrX 68296553 68296652 -98353644 - MIR SINE MIR -42 220 121 4 1106 303 250 14 0 chrX 68296704 68296776 -98353520 - MER63D DNA AcHobo -679 382 310 4 1106 450 251 145 29 chrX 68298357 68298529 -98351767 - ORR1E LTR MaLR -167 192 1 4 1106 351 96 0 0 chrX 68299421 68299473 -98350823 + (T)n Simple_repeat Simple_repeat 1 52 0 4 1106 1104 82 0 0 chrX 68299473 68299619 -98350677 - B1_Mus2 SINE Alu 0 147 2 4 1106 553 273 107 8 chrX 68300063 68300333 -98349963 - L2a LINE L2 -172 3254 2960 4 1106 1234 68 6 11 chrX 68301625 68301804 -98348492 + (GGGAGA)n Simple_repeat Simple_repeat 1 178 0 4 1106 189 107 0 0 chrX 68302474 68302502 -98347794 + (CAT)n Simple_repeat Simple_repeat 3 30 0 4 1106 26 30 0 0 chrX 68303369 68303402 -98346894 + GC_rich Low_complexity Low_complexity 1 33 0 4 1106 495 0 0 0 chrX 68305706 68305761 -98344535 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1106 441 0 0 0 chrX 68308631 68308680 -98341616 + (CCA)n Simple_repeat Simple_repeat 3 51 0 4 1106 303 317 54 27 chrX 68311602 68311751 -98338545 + MIR3 SINE MIR 47 199 -9 4 1106 351 0 0 0 chrX 68312906 68312945 -98337351 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1106 315 259 62 0 chrX 68313120 68313201 -98337095 - B4A SINE B4 -206 86 1 4 1106 262 260 180 10 chrX 68313613 68313819 -98336477 - L2a LINE L2 -64 3362 3122 4 1106 456 303 78 9 chrX 68313871 68314101 -98336195 - MER33 DNA MER1_type -77 247 2 4 1106 428 321 0 19 chrX 68315535 68315694 -98334602 - L1MC4a LINE L1 -130 7912 7757 4 1106 573 316 60 48 chrX 68315851 68316156 -98334140 + MLT1A0 LTR MaLR 3 306 -59 4 1106 1857 279 123 105 chrX 68316246 68317750 -98332546 - L1MC4a LINE L1 -274 7608 6131 4 1106 486 0 0 0 chrX 68317750 68317804 -98332492 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 1106 1857 279 123 105 chrX 68317804 68318595 -98331701 - L1MC4a LINE L1 -1752 6130 5273 4 1106 22 35 0 0 chrX 68318625 68318654 -98331642 + AT_rich Low_complexity Low_complexity 1 29 0 4 1106 209 217 0 0 chrX 68319008 68319054 -98331242 + T-rich Low_complexity Low_complexity 1 46 0 4 1106 1248 292 118 0 chrX 68319299 68319772 -98330524 - L1M4 LINE L1 -393 5791 5263 4 1106 279 0 0 0 chrX 68319856 68319887 -98330409 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1106 508 270 12 101 chrX 68319905 68320074 -98330222 - RSINE1 SINE B4 -2 163 10 4 1106 407 244 40 96 chrX 68320276 68320393 -98329903 - L1MA9 LINE L1 -23 6289 6168 4 1106 459 0 0 0 chrX 68320393 68320444 -98329852 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1106 407 244 40 96 chrX 68320444 68320503 -98329793 - L1MA9 LINE L1 -145 6167 6123 4 1106 833 230 59 20 chrX 68320511 68320715 -98329581 - B3 SINE B2 -4 212 1 4 1106 317 234 0 0 chrX 68320728 68320792 -98329504 - PB1D9 SINE Alu -10 110 47 4 1106 333 290 136 0 chrX 68320823 68320978 -98329318 - L1MA9 LINE L1 -183 6129 5954 4 1106 825 103 0 0 chrX 68321125 68321251 -98329045 + B1_Mus1 SINE Alu 11 136 -12 4 1106 212 0 0 35 chrX 68321251 68321280 -98329016 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 4 1106 399 284 92 0 chrX 68321325 68321466 -98328830 - L1MA9 LINE L1 -717 5472 5319 4 1106 604 261 75 0 chrX 68321568 68321729 -98328567 - B3 SINE B2 -42 174 2 4 1106 380 169 0 15 chrX 68321753 68321819 -98328477 - L1MD LINE L1 -2565 3581 3517 4 1106 1773 101 19 0 chrX 68321861 68322129 -98328167 + Lx2A1 LINE L1 6734 7006 -2 4 1106 358 328 80 98 chrX 68322210 68322524 -98327772 - B4A SINE B4 0 292 2 4 1106 822 258 134 10 chrX 68322588 68322976 -98327320 - L1MDa LINE L1 -2459 4078 3643 4 1106 1118 284 99 55 chrX 68322957 68323412 -98326884 - Lx8 LINE L1 -93 7380 6906 4 1106 1587 283 132 53 chrX 68323401 68324744 -98325552 - L1MDa LINE L1 -4169 2464 986 4 1106 1826 242 73 102 chrX 68325272 68325598 -98324698 - L1MC1 LINE L1 0 6333 6030 4 1106 1091 95 7 0 chrX 68325598 68325745 -98324551 + B1_Mur4 SINE Alu 2 149 -1 4 1106 1826 242 73 102 chrX 68325745 68326272 -98324024 - L1MC1 LINE L1 -304 6029 5505 4 1106 264 282 154 0 chrX 68326363 68326480 -98323816 - L1MC1 LINE L1 -2994 3152 3018 4 1106 266 317 113 27 chrX 68326571 68326756 -98323540 - Lx8 LINE L1 0 7473 7273 4 1106 335 221 23 23 chrX 68326776 68326864 -98323432 - L1MB2 LINE L1 -39 6132 6045 4 1106 26 30 0 0 chrX 68328315 68328348 -98321948 + AT_rich Low_complexity Low_complexity 1 33 0 4 1106 517 325 78 27 chrX 68329309 68329644 -98320652 + MLT1C LTR MaLR 2 353 -114 4 1106 740 254 223 41 chrX 68329654 68330175 -98320121 - L1_Mur3 LINE L1 -509 5782 5105 4 1106 648 316 105 53 chrX 68330171 68330778 -98319518 - L1ME1 LINE L1 -12 6167 5529 4 1106 27 0 0 0 chrX 68330779 68330806 -98319490 + AT_rich Low_complexity Low_complexity 1 27 0 4 1106 233 333 16 41 chrX 68332054 68332176 -98318120 - MIR SINE MIR -83 179 61 4 1106 180 0 0 0 chrX 68333094 68333114 -98317182 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1106 1489 240 69 5 chrX 68333114 68333532 -98316764 - Charlie4a DNA MER1_type -43 465 21 4 1106 226 305 52 10 chrX 68333682 68333778 -98316518 + MIRb SINE MIR 113 212 -56 4 1106 428 254 52 60 chrX 68334028 68334162 -98316134 + MER63B DNA AcHobo 303 435 -1 4 1106 328 109 89 18 chrX 68335429 68335485 -98314811 - HAL1-3A_ME LINE L1 -824 2034 1975 4 1106 262 246 0 0 chrX 68335486 68335555 -98314741 + (TG)n Simple_repeat Simple_repeat 1 69 0 4 1106 602 263 8 0 chrX 68335567 68335685 -98314611 - B1_Mur4 SINE Alu -17 133 15 4 1106 257 410 25 25 chrX 68336641 68336801 -98313495 - MIR SINE MIR -79 183 24 4 1106 435 214 61 10 chrX 68336927 68337026 -98313270 + URR1A DNA MER1_type 20 123 -103 4 1106 827 302 21 51 chrX 68337567 68337701 -98312595 - B4A SINE B4 -14 278 146 4 1106 704 229 14 7 chrX 68337701 68337842 -98312454 - B1_Mur2 SINE Alu -6 143 2 4 1106 827 302 21 51 chrX 68337842 68337941 -98312355 - B4A SINE B4 -147 145 52 4 1106 552 359 156 14 chrX 68338286 68338806 -98311490 + L3 LINE CR1 3310 3903 -586 4 1106 192 200 0 0 chrX 68339206 68339251 -98311045 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 1106 698 237 100 42 chrX 68339294 68339554 -98310742 - Lx8 LINE L1 -60 7413 7139 4 1106 1161 284 18 9 chrX 68339856 68340183 -98310113 - Lx9 LINE L1 -243 7401 7072 4 1106 639 26 0 0 chrX 68340239 68340316 -98309980 + (TC)n Simple_repeat Simple_repeat 2 78 0 5 1106 207 0 0 0 chrX 68340316 68340338 -98309958 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1106 320 227 77 35 chrX 68340338 68340468 -98309828 + Lx8 LINE L1 7353 7471 -2 5 1106 292 299 204 0 chrX 68340527 68340694 -98309602 - RMER30 DNA MER1_type -1 201 1 5 1106 425 283 9 0 chrX 68340718 68340831 -98309465 + RSINE1 SINE B4 27 140 -25 5 1106 396 0 0 0 chrX 68340831 68340875 -98309421 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1106 195 69 0 0 chrX 68340879 68340908 -98309388 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 5 1106 251 200 0 39 chrX 68342169 68342221 -98308075 - LTR45 LTR ERV1 -327 198 149 5 1106 188 326 33 22 chrX 68343039 68343130 -98307166 - MIRc SINE MIR -77 191 100 5 1106 357 146 0 0 chrX 68344903 68344958 -98305338 - L1MB8 LINE L1 -214 5964 5910 5 1106 648 196 200 6 chrX 68344960 68345140 -98305156 + B3 SINE B2 2 216 0 5 1106 964 145 29 0 chrX 68345165 68345303 -98304993 + B1_Mur4 SINE Alu 1 142 -8 5 1106 1007 210 28 28 chrX 68345334 68345359 -98304937 + Lx9 LINE L1 7394 7418 -226 5 1106 243 0 0 0 chrX 68345359 68345386 -98304910 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1106 1007 210 28 28 chrX 68345386 68345610 -98304686 + Lx9 LINE L1 7419 7643 -1 5 1106 266 73 24 0 chrX 68345613 68345654 -98304642 + (GGGA)n Simple_repeat Simple_repeat 4 45 0 5 1106 1113 121 0 0 chrX 68345695 68345869 -98304427 + (GGAA)n Simple_repeat Simple_repeat 3 176 0 5 1106 226 293 86 50 chrX 68345896 68346036 -98304260 - L1M5 LINE L1 -295 5884 5740 5 1106 968 236 36 36 chrX 68346205 68346289 -98304007 - ID_B1 SINE B4 0 224 140 5 1106 1558 69 0 0 chrX 68346289 68346477 -98303819 + L1_Mus1 LINE L1 6370 6557 -10 5 1106 270 0 0 0 chrX 68346477 68346507 -98303789 + (TAA)n Simple_repeat Simple_repeat 1 30 0 5 1106 968 236 36 36 chrX 68346507 68346645 -98303651 - ID_B1 SINE B4 -85 139 2 5 1106 1177 168 21 80 chrX 68346973 68347212 -98303084 + URR1B DNA MER1_type 1 225 0 5 1106 189 0 0 0 chrX 68348407 68348428 -98301868 + (TA)n Simple_repeat Simple_repeat 2 22 0 5 1106 435 241 107 22 chrX 68348467 68348645 -98301651 - L1MDa LINE L1 -577 6056 5864 5 1106 454 239 9 9 chrX 68348962 68349076 -98301220 + L1M2 LINE L1 3676 3789 -2354 5 1106 316 219 16 0 chrX 68349145 68349209 -98301087 - ID4 SINE ID -18 65 1 5 1106 594 257 205 40 chrX 68349227 68349871 -98300425 - L1MDa LINE L1 -2642 3895 3146 5 1106 1778 260 56 31 chrX 68350007 68350527 -98299769 - Lx8 LINE L1 0 7473 6941 5 1106 3904 269 58 37 chrX 68350535 68352013 -98298283 + L1_Mur3 LINE L1 3400 4908 -972 5 1106 1348 275 103 30 chrX 68352045 68352877 -98297419 - L1MDa LINE L1 -3983 2650 1758 5 1106 225 258 278 9 chrX 68352941 68353041 -98297255 - L1MDa LINE L1 -5236 1397 1267 5 1106 243 88 0 0 chrX 68353041 68353075 -98297221 + (CTTG)n Simple_repeat Simple_repeat 2 35 0 5 1106 227 241 197 26 chrX 68353075 68353276 -98297020 - L1MDa LINE L1 -5367 1266 1024 5 1106 1258 291 90 25 chrX 68353370 68353860 -98296436 - L1MDa LINE L1 -6062 571 50 5 1106 218 32 0 31 chrX 68354989 68355021 -98295275 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 5 1106 273 297 32 48 chrX 68356011 68356135 -98294161 + MARNA DNA Mariner 135 256 -330 5 1106 459 100 0 0 chrX 68356139 68356209 -98294087 + (TCC)n Simple_repeat Simple_repeat 1 70 0 5 1106 274 364 31 0 chrX 68356215 68356344 -98293952 + MARNA DNA Mariner 281 413 -173 5 1106 505 243 0 9 chrX 68357040 68357148 -98293148 - PB1D10 SINE Alu -1 116 10 5 1106 240 347 61 10 chrX 68357438 68357537 -98292759 - MIRm SINE MIR -137 139 36 5 1106 409 250 0 12 chrX 68357933 68358014 -98292282 + ID4_ SINE ID 2 81 -2 5 1106 210 395 53 0 chrX 68358961 68359075 -98291221 - L2b LINE L2 -16 3359 3240 5 1106 251 378 18 41 chrX 68361693 68361864 -98288432 + MER58A DNA MER1_type 1 167 -57 5 1106 473 265 83 33 chrX 68363124 68363245 -98287051 + B1F1 SINE Alu 8 134 -15 5 1106 432 0 0 0 chrX 68363266 68363314 -98286982 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 1106 288 0 0 0 chrX 68363314 68363345 -98286951 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1106 217 375 39 0 chrX 68363795 68363923 -98286373 - MIRb SINE MIR -6 262 130 5 1106 236 345 26 26 chrX 68364465 68364581 -98285715 + MIRc SINE MIR 29 144 -124 5 1106 608 93 0 10 chrX 68364855 68364953 -98285343 + (TCTCC)n Simple_repeat Simple_repeat 2 98 0 5 1106 378 256 164 23 chrX 68364989 68365117 -98285179 - B1F1 SINE Alu -1 148 3 5 1106 309 263 179 8 chrX 68365894 68366028 -98284268 + L1MB5 LINE L1 5565 5721 -453 5 1106 615 253 307 32 chrX 68366040 68366379 -98283917 + Lx8 LINE L1 7033 7464 -9 5 1106 922 243 36 4 chrX 68366402 68366650 -98283646 + L1MB5 LINE L1 5723 5978 -196 5 1106 1676 27 27 0 chrX 68366976 68367160 -98283136 - B2_Mm1t SINE B2 -4 189 1 5 1106 365 191 9 0 chrX 68370530 68370645 -98279651 + CT-rich Low_complexity Low_complexity 1 116 0 5 1106 237 33 0 0 chrX 68371543 68371573 -98278723 + (CCA)n Simple_repeat Simple_repeat 1 30 0 5 1106 585 64 0 0 chrX 68371969 68372047 -98278249 + (CAG)n Simple_repeat Simple_repeat 1 78 0 5 1106 681 193 20 7 chrX 68372327 68372478 -98277818 + HAL1-2a_MD LINE L1 2339 2491 -533 5 1106 183 72 209 23 chrX 68372579 68372622 -98277674 + L4 LINE RTE 1725 1775 -254 5 1106 501 285 106 6 chrX 68373032 68373230 -98277066 - MIR SINE MIR -45 231 6 5 1106 703 248 205 73 chrX 68373337 68373693 -98276603 - MLT1F2 LTR MaLR 0 569 167 5 1106 206 278 132 10 chrX 68374062 68374208 -98276088 + L2c LINE L2 3033 3193 -182 5 1106 234 278 86 15 chrX 68374985 68375118 -98275178 - MIR SINE MIR -89 173 39 5 1106 218 270 200 0 chrX 68375158 68375258 -98275038 + MIR SINE MIR 109 228 -34 5 1106 1039 255 106 126 chrX 68376748 68377243 -98273053 - L1MA6 LINE L1 -353 5947 5454 5 1106 279 0 0 0 chrX 68377243 68377274 -98273022 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 5 1106 1039 285 79 11 chrX 68377274 68377598 -98272698 - L1MA6 LINE L1 -427 5453 5109 5 1106 719 260 124 2 chrX 68379629 68379916 -98270380 + MER2 DNA MER2_type 2 320 -25 5 1106 1205 83 0 0 chrX 68381343 68381487 -98268809 + B1_Mus1 SINE Alu 1 144 -4 5 1106 414 0 0 0 chrX 68381488 68381534 -98268762 + (TAA)n Simple_repeat Simple_repeat 3 48 0 5 1106 373 222 86 0 chrX 68382266 68382347 -98267949 + PB1D10 SINE Alu 3 90 -27 5 1106 198 0 0 0 chrX 68382367 68382389 -98267907 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 1106 303 256 35 35 chrX 68382435 68382520 -98267776 - ORR1E LTR MaLR -14 365 281 5 1106 322 310 34 34 chrX 68382663 68382810 -98267486 - ORR1E LTR MaLR -212 147 1 5 1106 387 0 0 0 chrX 68383839 68383882 -98266414 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1106 243 0 0 0 chrX 68383882 68383908 -98266388 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 1106 538 191 0 0 chrX 68384418 68384502 -98265794 + 5S rRNA rRNA 8 91 -30 5 1106 248 313 123 70 chrX 68384592 68384632 -98265664 - MLT1K LTR MaLR -19 576 539 5 1106 186 43 0 0 chrX 68384632 68384655 -98265641 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1106 248 313 123 70 chrX 68384655 68384858 -98265438 - MLT1K LTR MaLR -57 538 320 5 1106 293 387 36 0 chrX 68385544 68385681 -98264615 - MER5A DNA MER1_type -46 143 2 5 1106 2055 239 145 36 chrX 68385855 68386753 -98263543 - L1MA6 LINE L1 -274 6728 5712 5 1106 374 310 8 57 chrX 68386765 68386888 -98263408 - PB1D10 SINE Alu 0 117 1 5 1106 890 253 11 16 chrX 68386888 68386968 -98263328 - ID SINE ID -145 79 1 5 1106 1785 267 73 32 chrX 68386968 68387162 -98263134 - L1MA6 LINE L1 -1132 5713 5529 5 1106 517 83 24 0 chrX 68387162 68387246 -98263050 + (TAGA)n Simple_repeat Simple_repeat 3 88 0 5 1106 261 83 0 0 chrX 68387249 68387285 -98263011 + (CAGG)n Simple_repeat Simple_repeat 4 39 0 5 1106 1785 271 81 35 chrX 68387285 68387912 -98262384 - L1MA6 LINE L1 -1317 5531 4817 5 1106 330 342 0 0 chrX 68387912 68388026 -98262270 + PB1D10 SINE Alu 2 115 -2 5 1106 1741 266 97 33 chrX 68388026 68388841 -98261455 - L1MA6 LINE L1 -2032 4816 3946 5 1106 366 42 0 0 chrX 68388841 68388889 -98261407 + (TC)n Simple_repeat Simple_repeat 2 49 0 5 1106 237 33 0 0 chrX 68388893 68388923 -98261373 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 5 1106 996 104 0 0 chrX 68388923 68389057 -98261239 - B1_Mus1 SINE Alu -13 135 2 5 1106 540 201 92 101 chrX 68389220 68389279 -98261017 - L1MA6 LINE L1 -2943 3902 3851 5 1106 288 0 0 0 chrX 68389279 68389311 -98260985 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 5 1106 540 201 92 101 chrX 68389311 68389489 -98260807 - L1MA6 LINE L1 -2995 3850 3667 5 1106 839 235 66 0 chrX 68389542 68389738 -98260558 + B3 SINE B2 7 215 -1 5 1106 1132 286 17 61 chrX 68389761 68390223 -98260073 - L1MA6 LINE L1 -3226 3619 3178 5 1106 272 270 11 0 chrX 68390225 68390314 -98259982 - L1MA6 LINE L1 -3937 2908 2819 5 1106 294 227 108 50 chrX 68390867 68391006 -98259290 - L1MA6 LINE L1 -4290 2559 2413 5 1106 183 80 0 0 chrX 68391288 68391313 -98258983 + (TTG)n Simple_repeat Simple_repeat 2 26 0 5 1106 651 287 0 0 chrX 68391816 68391959 -98258337 + RSINE1 SINE B4 3 145 -20 5 1106 204 97 0 0 chrX 68391960 68391991 -98258305 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1106 186 43 0 0 chrX 68394281 68394304 -98255992 + (TGGG)n Simple_repeat Simple_repeat 2 24 0 5 1106 483 241 34 8 chrX 68394304 68394421 -98255875 - PB1D7 SINE Alu 0 120 1 5 1106 299 209 53 42 chrX 68395001 68395096 -98255200 - HAL1 LINE L1 -2326 181 86 5 1106 273 226 0 16 chrX 68395929 68395992 -98254304 - Lx8 LINE L1 0 7473 7412 5 1106 3113 277 100 34 chrX 68396089 68397206 -98253090 - Lx8 LINE L1 -350 7123 5933 5 1106 219 36 0 0 chrX 68397283 68397311 -98252985 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1106 491 221 8 74 chrX 68397456 68397578 -98252718 + ID_B1 SINE B4 99 212 -12 5 1106 594 312 9 31 chrX 68398007 68398232 -98252064 + MIRb SINE MIR 34 253 -15 5 1106 270 280 1 0 chrX 68399127 68399208 -98251088 + Charlie4z DNA MER1_type 81 162 -5 5 1106 254 316 24 71 chrX 68399557 68399768 -98250528 + MIRc SINE MIR 46 246 -22 5 1106 216 67 0 0 chrX 68399916 68399946 -98250350 + (CCTG)n Simple_repeat Simple_repeat 1 30 0 5 1106 360 313 12 18 chrX 68401790 68401959 -98248337 + CT-rich Low_complexity Low_complexity 2 169 0 5 1106 594 75 0 0 chrX 68401965 68402045 -98248251 + (TC)n Simple_repeat Simple_repeat 1 80 0 5 1106 207 284 13 13 chrX 68403586 68403661 -98246635 + MIRc SINE MIR 76 150 -118 5 1106 680 306 49 42 chrX 68404792 68405198 -98245098 - L3 LINE CR1 -355 4134 3726 5 1106 402 248 9 17 chrX 68405719 68405834 -98244462 - PB1D7 SINE Alu -2 118 5 5 1106 1492 126 13 5 chrX 68406629 68406853 -98243443 + URR1A DNA MER1_type 1 226 0 5 1106 210 143 0 0 chrX 68409166 68409201 -98241095 + (T)n Simple_repeat Simple_repeat 1 35 0 6 1106 3048 93 24 7 chrX 68410061 68410485 -98239811 - Lx4A LINE L1 -356 6702 6272 6 1106 3097 73 2 5 chrX 68411587 68411984 -98238312 - MTA_Mm LTR MaLR 0 396 1 6 1106 234 211 18 0 chrX 68412890 68412947 -98237349 - MTEa LTR MaLR -3 376 319 6 1106 366 279 162 24 chrX 68413109 68413362 -98236934 - Lx9 LINE L1 -19 7625 7338 6 1106 1015 296 79 39 chrX 68413383 68413703 -98236593 - Lx9 LINE L1 -367 7277 6935 6 1106 1684 36 0 0 chrX 68413703 68413895 -98236401 + B2_Mm1a SINE B2 1 192 -1 6 1106 1015 296 79 39 chrX 68413895 68414031 -98236265 - Lx9 LINE L1 -710 6934 6803 6 1106 369 218 35 0 chrX 68414034 68414121 -98236175 + B3 SINE B2 127 216 0 6 1106 418 270 10 10 chrX 68414146 68414247 -98236049 - MTEa LTR MaLR -231 148 48 6 1106 579 29 0 0 chrX 68414939 68415008 -98235288 + (GA)n Simple_repeat Simple_repeat 2 70 0 6 1106 758 270 43 43 chrX 68415011 68415290 -98235006 - MLT2C1 LTR ERVL -91 306 28 6 1106 263 252 76 134 chrX 68415534 68415547 -98234749 - PB1D7 SINE Alu -2 118 7 6 1106 385 274 123 0 chrX 68415547 68415653 -98234643 - ID_B1 SINE B4 -18 206 88 6 1106 1373 216 132 14 chrX 68416082 68416452 -98233844 + MTD LTR MaLR 6 419 0 6 1106 892 26 9 9 chrX 68416997 68417113 -98233183 + (CA)n Simple_repeat Simple_repeat 2 117 0 6 1106 264 274 70 38 chrX 68417158 68417351 -98232945 + L1ME2z LINE L1 5770 5969 -195 6 1106 300 227 11 16 chrX 68417381 68417468 -98232828 + B1F1 SINE Alu 55 141 -6 6 1106 371 179 51 0 chrX 68417475 68417553 -98232743 + L1ME2z LINE L1 6015 6096 -348 6 1106 1526 138 20 28 chrX 68417603 68417857 -98232439 - L1Md_F2 LINE L1 -1 6581 6330 6 1106 213 94 0 0 chrX 68418133 68418165 -98232131 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 6 1106 1224 41 0 0 chrX 68418181 68418326 -98231970 + B1_Mus2 SINE Alu 3 147 0 6 1106 207 0 0 0 chrX 68418328 68418351 -98231945 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1106 258 283 19 83 chrX 68418351 68418459 -98231837 + Lx8 LINE L1 6654 6754 -719 6 1106 266 281 0 42 chrX 68418532 68418651 -98231645 + Lx8 LINE L1 7358 7471 -2 6 1106 547 299 58 5 chrX 68418706 68418894 -98231402 - RMER30 DNA MER1_type 0 202 5 6 1107 1532 310 60 22 chrX 68420528 68421149 -98229147 + Lx8 LINE L1 6830 7473 0 6 1107 304 339 39 55 chrX 68421896 68422077 -98228219 + MIR SINE MIR 2 179 -83 6 1107 235 279 44 80 chrX 68422169 68422282 -98228014 + RMER15 LTR ERVL 1 109 -466 6 1107 387 257 87 112 chrX 68422935 68423141 -98227155 + LTR81A LTR ERV1? 23 223 -1127 6 1107 511 234 123 69 chrX 68423176 68423571 -98226725 + MLT2C1 LTR ERVL 1 392 -72 6 1107 541 313 7 0 chrX 68423676 68423823 -98226473 + Lx8 LINE L1 7080 7227 -246 6 1107 273 203 62 15 chrX 68423846 68423911 -98226385 + RMER15 LTR ERVL 404 471 -104 6 1107 397 333 65 24 chrX 68424094 68424263 -98226033 - MER45C DNA Tip100 -334 619 444 6 1107 8078 70 3 2 chrX 68424622 68426231 -98224065 + L1_Mus2 LINE L1 4962 6654 0 6 1107 938 150 6 0 chrX 68426256 68426423 -98223873 + GA-rich Low_complexity Low_complexity 1 168 0 6 1107 346 264 21 21 chrX 68426426 68426519 -98223777 + Lx8 LINE L1 6269 6361 -1112 6 1107 1824 159 34 40 chrX 68427021 68427307 -98222989 - MTC LTR MaLR -2 419 142 6 1107 3048 45 0 0 chrX 68427307 68427661 -98222635 + IAPEY2_LTR LTR ERVK 1 354 -3 6 1107 1824 159 34 40 chrX 68427661 68427728 -98222568 - MTC LTR MaLR -280 141 68 6 1107 16347 62 12 1 chrX 68427729 68430452 -98219844 - L1Md_F2 LINE L1 -12 6570 3818 6 1107 4039 75 0 4 chrX 68430454 68430988 -98219308 + L1Md_F2 LINE L1 3303 3834 -2049 6 1107 364 182 78 0 chrX 68430988 68431065 -98219231 - MTC LTR MaLR -338 83 1 6 1107 1297 222 59 0 chrX 68431065 68431385 -98218911 - L1_Mur3 LINE L1 -1517 4363 4025 6 1107 318 356 25 82 chrX 68431512 68431540 -98218756 + ID_B1 SINE B4 65 214 -10 6 1107 429 328 53 0 chrX 68431540 68431671 -98218625 + B1F1 SINE Alu 2 139 -10 6 1107 2362 276 41 44 chrX 68432107 68433000 -98217296 + L1MB5 LINE L1 5283 6173 -1 6 1107 212 259 17 0 chrX 68433652 68433710 -98216586 + MIR SINE MIR 25 83 -179 6 1107 1585 245 85 20 chrX 68433891 68434383 -98215913 - Lx8 LINE L1 0 7473 6950 6 1107 656 214 10 73 chrX 68435612 68435804 -98214492 + MLT1C LTR MaLR 1 180 -287 6 1107 571 254 89 52 chrX 68435844 68436035 -98214261 + MLT1C LTR MaLR 254 451 -16 6 1107 197 79 0 73 chrX 68436502 68436543 -98213753 + T-rich Low_complexity Low_complexity 3 40 0 6 1107 333 191 14 68 chrX 68436547 68436620 -98213676 - ID4_ SINE ID -10 73 5 6 1107 584 271 44 19 chrX 68437275 68437433 -98212863 + RSINE1 SINE B4 3 164 -1 6 1107 831 164 0 0 chrX 68437454 68437588 -98212708 + B1_Mus1 SINE Alu 1 134 -14 6 1107 246 32 0 0 chrX 68437588 68437619 -98212677 + (GA)n Simple_repeat Simple_repeat 2 32 0 6 1107 451 324 98 6 chrX 68437624 68437807 -98212489 - B4A SINE B4 -92 200 1 6 1107 465 207 26 35 chrX 68438197 68438312 -98211984 - PB1D7 SINE Alu -6 114 1 6 1107 245 311 0 0 chrX 68438942 68439003 -98211293 + (TGGA)n Simple_repeat Simple_repeat 4 64 0 6 1107 194 323 0 0 chrX 68439226 68439288 -98211008 - MIR SINE MIR -56 152 91 6 1107 228 233 0 0 chrX 68439996 68440039 -98210257 + (TCCA)n Simple_repeat Simple_repeat 2 44 0 6 1107 201 180 19 74 chrX 68440039 68440093 -98210203 - L2b LINE L2 0 3375 3325 6 1107 362 263 0 12 chrX 68440983 68441074 -98209222 + B1F SINE Alu 5 93 -56 6 1107 406 286 113 26 chrX 68441166 68441317 -98208979 + RSINE1 SINE B4 2 165 0 6 1107 280 232 0 104 chrX 68441989 68442066 -98208230 + MTD LTR MaLR 177 245 -174 6 1107 858 282 63 47 chrX 68442668 68442986 -98207310 - L1MB5 LINE L1 0 6174 5847 6 1107 835 215 103 43 chrX 68442986 68443219 -98207077 - MTD LTR MaLR 0 419 173 6 1107 4899 122 57 39 chrX 68443722 68444549 -98205747 + RMER21B LTR ERV1 1 842 0 6 1107 1795 277 70 19 chrX 68444550 68445125 -98205171 + L1MB5 LINE L1 5563 6166 -8 6 1107 185 200 0 0 chrX 68445570 68445605 -98204691 + MIR SINE MIR 109 143 -65 6 1107 297 200 0 15 chrX 68445618 68445684 -98204612 - MER53 DNA hAT -128 65 1 6 1107 277 261 43 75 chrX 68446051 68446159 -98204137 - L2a LINE L2 -27 3399 3264 6 1107 1305 276 30 60 chrX 68446284 68446654 -98203642 + ORR1E LTR MaLR 1 359 0 6 1107 395 295 159 40 chrX 68446685 68446886 -98203410 - RMER15 LTR ERVL -15 560 336 6 1107 192 343 15 0 chrX 68447316 68447383 -98202913 - L2b LINE L2 0 3375 3308 6 1107 180 0 0 0 chrX 68448510 68448530 -98201766 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 6 1107 354 23 0 0 chrX 68448530 68448572 -98201724 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1107 1120 217 14 27 chrX 68448586 68448809 -98201487 + ID_B1 SINE B4 5 224 0 6 1107 283 298 91 19 chrX 68449158 68449312 -98200984 - MER53 DNA hAT -6 187 23 6 1107 5547 96 44 17 chrX 68449432 68450261 -98200035 + Lx2 LINE L1 5672 6506 -491 6 1107 413 333 0 0 chrX 68450919 68451084 -98199212 + (TGG)n Simple_repeat Simple_repeat 1 165 0 6 1107 3950 97 5 30 chrX 68451133 68451731 -98198565 + RLTR19-int LTR ERVK 1430 2012 -4125 6 1107 747 33 0 0 chrX 68452094 68452184 -98198112 + (GAA)n Simple_repeat Simple_repeat 2 91 0 6 1107 3500 93 39 20 chrX 68452184 68452677 -98197619 + Lx2 LINE L1 6495 6996 -1 6 1107 408 255 67 29 chrX 68452913 68453018 -98197278 + PB1D10 SINE Alu 2 110 -7 6 1107 649 295 79 0 chrX 68453021 68453211 -98197085 + Lx8 LINE L1 6430 6634 -839 6 1107 792 290 118 78 chrX 68453300 68453891 -98196405 + Lx8 LINE L1 6856 7470 -3 6 1107 276 276 0 33 chrX 68453899 68453989 -98196307 + GA-rich Low_complexity Low_complexity 3 89 0 6 1107 8159 48 2 3 chrX 68454396 68455753 -98194543 - L1Md_F2 LINE L1 -12 6570 5216 6 1107 408 247 0 0 chrX 68455754 68455827 -98194469 - ID_B1 SINE B4 -68 156 84 6 1107 424 308 128 43 chrX 68456558 68456938 -98193358 + MLT1C LTR MaLR 1 390 0 6 1107 408 71 0 0 chrX 68457516 68457572 -98192724 + (TTTA)n Simple_repeat Simple_repeat 3 58 0 6 1107 441 228 99 0 chrX 68457822 68457923 -98192373 + PB1D10 SINE Alu 5 115 -2 6 1107 21 0 0 0 chrX 68457969 68457990 -98192306 + AT_rich Low_complexity Low_complexity 1 21 0 6 1107 731 240 38 0 chrX 68458434 68458466 -98191830 - L1MA6 LINE L1 -330 5970 5937 6 1107 244 48 0 45 chrX 68458466 68458510 -98191786 + (GTTTG)n Simple_repeat Simple_repeat 3 44 0 6 1107 731 240 38 0 chrX 68458510 68458660 -98191636 - L1MA6 LINE L1 -364 5936 5782 6 1107 1142 237 201 3 chrX 68458907 68459216 -98191080 - ORR1D2 LTR MaLR 0 370 1 6 1107 429 256 61 46 chrX 68459275 68459406 -98190890 + B1F SINE Alu 12 144 -5 6 1107 1540 258 60 22 chrX 68459541 68460217 -98190079 + L1M4 LINE L1 4767 5478 -700 6 1107 649 261 1 73 chrX 68460327 68460517 -98189779 + B4 SINE B4 69 245 -47 6 1107 837 329 92 16 chrX 68460544 68460992 -98189304 + Lx8 LINE L1 6953 7434 -39 6 1107 321 280 13 0 chrX 68461020 68461095 -98189201 + B4 SINE B4 215 290 -2 6 1107 335 64 21 0 chrX 68461173 68461220 -98189076 + HAL1-3A_ME LINE L1 1974 2021 -837 6 1107 457 287 9 0 chrX 68461225 68461333 -98188963 + ID_B1 SINE B4 105 213 -11 6 1107 209 308 77 77 chrX 68461487 68461617 -98188679 + MER5A DNA MER1_type 2 131 -58 6 1107 376 283 65 0 chrX 68461783 68461875 -98188421 - PB1D10 SINE Alu -11 106 9 6 1107 605 279 8 0 chrX 68461996 68462125 -98188171 - RSINE1 SINE B4 -34 131 2 6 1107 1000 256 23 9 chrX 68462142 68462359 -98187937 - ID_B1 SINE B4 0 224 5 6 1107 312 200 24 146 chrX 68462521 68462644 -98187652 - L1MB4 LINE L1 -6 6174 6067 6 1107 618 253 63 51 chrX 68462771 68462929 -98187367 - RSINE1 SINE B4 -2 163 4 6 1107 340 250 74 87 chrX 68462972 68463264 -98187032 - L1M3 LINE L1 -1453 4687 4419 6 1107 401 241 43 26 chrX 68463508 68463623 -98186673 + PB1D10 SINE Alu 1 117 0 6 1107 411 331 0 34 chrX 68464257 68464435 -98185861 - L1ME1 LINE L1 -75 6104 5933 6 1107 215 211 197 0 chrX 68464447 68464518 -98185778 + BC1_Mm scRNA scRNA 1 85 -67 7 1107 450 315 11 8 chrX 68464528 68464745 -98185551 - L1ME1 LINE L1 -523 5921 5713 6 1107 1238 67 51 0 chrX 68464751 68464929 -98185367 + B2_Mm2 SINE B2 6 192 -3 7 1107 234 265 0 0 chrX 68464943 68464992 -98185304 - ID_B1 SINE B4 -12 212 164 7 1107 189 238 0 60 chrX 68465073 68465140 -98185156 - MIR3 SINE MIR -140 68 6 7 1107 198 350 78 42 chrX 68465255 68465363 -98184933 - MIR SINE MIR -134 134 25 7 1107 414 0 0 0 chrX 68465833 68465879 -98184417 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1107 423 0 0 0 chrX 68465975 68466022 -98184274 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 1107 324 0 0 0 chrX 68466595 68466631 -98183665 + (TC)n Simple_repeat Simple_repeat 1 36 0 7 1107 387 0 0 0 chrX 68466631 68466673 -98183623 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 1107 679 285 176 25 chrX 68466767 68467093 -98183203 - MER44B DNA MER2_type -132 418 7 7 1107 1346 20 0 0 chrX 68467381 68467527 -98182769 - B1_Mus2 SINE Alu 0 147 2 7 1107 252 0 0 0 chrX 68467797 68467825 -98182471 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1107 198 298 59 88 chrX 68469065 68469201 -98181095 - MIR3 SINE MIR -21 187 56 7 1107 211 184 0 0 chrX 68469343 68469381 -98180915 + C-rich Low_complexity Low_complexity 1 38 0 7 1107 305 290 69 31 chrX 68470863 68471023 -98179273 + MIR SINE MIR 79 244 -18 7 1107 229 272 136 0 chrX 68472726 68472829 -98177467 - L3 LINE CR1 -2152 2337 2221 7 1107 423 254 88 6 chrX 68473071 68473241 -98177055 - MER33 DNA MER1_type -112 212 29 7 1107 299 258 135 0 chrX 68473531 68473620 -98176676 + PB1D10 SINE Alu 5 105 -12 7 1107 207 0 0 0 chrX 68473621 68473644 -98176652 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 7 1107 386 258 53 23 chrX 68473796 68473927 -98176369 - MER5B DNA MER1_type -2 176 42 7 1107 316 336 27 18 chrX 68474157 68474269 -98176027 - MER5A DNA MER1_type -23 166 54 7 1107 366 201 75 46 chrX 68474804 68474910 -98175386 - ID_B1 SINE B4 -48 176 76 7 1107 722 217 79 14 chrX 68475436 68475576 -98174720 - B1_Mur1 SINE Alu 0 149 1 7 1107 322 318 109 32 chrX 68476520 68476741 -98173555 - MARNA DNA Mariner -174 412 175 7 1107 385 178 41 0 chrX 68476739 68476812 -98173484 - B1_Mur1 SINE Alu 0 149 74 7 1107 922 235 29 18 chrX 68477658 68477879 -98172417 - B3 SINE B2 -8 208 1 7 1107 423 307 110 40 chrX 68478189 68478536 -98171760 + MLT1C LTR MaLR 41 388 -2 7 1107 3475 126 76 104 chrX 68478627 68479380 -98170916 + RMER6A LTR ERVK 25 756 0 7 1107 551 234 137 34 chrX 68481510 68481744 -98168552 + RMER15 LTR ERVL 306 563 -12 7 1107 245 169 261 0 chrX 68482167 68482232 -98168064 + MER58B DNA MER1_type 260 341 0 7 1107 803 226 108 187 chrX 68482756 68483061 -98167235 + B4 SINE B4 10 290 -2 7 1107 200 125 0 59 chrX 68483171 68483222 -98167074 + T-rich Low_complexity Low_complexity 1 48 0 7 1107 354 218 141 0 chrX 68483357 68483435 -98166861 - PB1D10 SINE Alu -28 89 1 7 1107 398 287 9 9 chrX 68485477 68485593 -98164703 - PB1D10 SINE Alu -1 116 1 7 1107 22 0 0 0 chrX 68487366 68487388 -98162908 + AT_rich Low_complexity Low_complexity 1 22 0 7 1107 486 250 0 26 chrX 68487497 68487612 -98162684 + PB1D10 SINE Alu 1 112 -5 7 1107 191 333 66 88 chrX 68488371 68488552 -98161744 + MER5B DNA MER1_type 1 177 -1 7 1107 246 105 0 0 chrX 68489426 68489464 -98160832 + (TAATG)n Simple_repeat Simple_repeat 5 42 0 7 1107 233 348 89 0 chrX 68489492 68489650 -98160646 + L3 LINE CR1 3634 3805 -684 7 1107 1344 281 20 35 chrX 68490566 68490968 -98159328 - Lx9 LINE L1 -441 7203 6808 7 1107 212 330 10 50 chrX 68491428 68491527 -98158769 + L2a LINE L2 3332 3426 0 7 1107 1716 21 0 0 chrX 68492041 68492232 -98158064 - L1Md_A LINE L1 0 6582 6392 7 1107 191 381 20 20 chrX 68492597 68492696 -98157600 - L2 LINE L2 -597 2822 2724 7 1107 327 154 0 0 chrX 68493179 68493244 -98157052 + (TGGA)n Simple_repeat Simple_repeat 2 66 0 7 1107 239 170 43 0 chrX 68493362 68493409 -98156887 + ORR1A2 LTR MaLR 266 314 -13 7 1107 1352 120 34 34 chrX 68493410 68493643 -98156653 + ORR1A2-int LTR MaLR 1 233 -1276 7 1107 10496 70 30 1 chrX 68493671 68493692 -98156604 - Lx3_Mus LINE L1 -4 7005 6984 7 1107 1950 44 13 0 chrX 68493692 68493920 -98156376 - L1Md_F3 LINE L1 -15 6569 6339 7 1107 10496 70 20 1 chrX 68493920 68495888 -98154408 - Lx3_Mus LINE L1 -26 6983 4981 7 1107 3608 63 24 0 chrX 68495886 68496347 -98153949 + Lx3_Mus LINE L1 4479 4950 -936 7 1107 1595 144 26 4 chrX 68496347 68496611 -98153685 + ORR1A2-int LTR MaLR 228 497 -1466 7 1107 207 0 0 0 chrX 68496700 68496723 -98153573 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 7 1107 311 284 0 0 chrX 68496733 68496807 -98153489 + ORR1A2-int LTR MaLR 890 963 -546 7 1107 1736 104 74 4 chrX 68496818 68497088 -98153208 + ORR1A2-int LTR MaLR 1037 1325 -184 7 1107 5060 166 60 7 chrX 68497088 68497949 -98152347 - Lx2B LINE L1 0 7000 6094 7 1107 236 326 42 32 chrX 68497960 68498055 -98152241 - PB1D10 SINE Alu -20 97 2 7 1107 508 250 34 17 chrX 68498600 68498718 -98151578 - B1F SINE Alu -29 120 1 7 1107 659 238 7 27 chrX 68499483 68499630 -98150666 - B1_Mur1 SINE Alu 0 149 6 7 1107 402 178 0 2 chrX 68499637 68499705 -98150591 - ID_B1 SINE B4 -69 155 93 7 1107 429 33 0 16 chrX 68499939 68500000 -98150296 - B1_Mus2 SINE Alu 0 147 88 7 1107 707 68 0 0 chrX 68500000 68500088 -98150208 - B1_Mus1 SINE Alu -60 88 1 1 1107 284 214 20 10 chrX 68500001 68500100 -98150196 - ORR1B1-int LTR MaLR -776 733 634 2 1107 294 95 0 0 chrX 68500145 68500187 -98150109 + (CTTA)n Simple_repeat Simple_repeat 4 45 0 3 1107 950 233 5 15 chrX 68500194 68500399 -98149897 - B3 SINE B2 -13 203 1 4 1107 2294 54 7 0 chrX 68500489 68500765 -98149531 - L1_Mus1 LINE L1 0 6567 6290 5 1107 670 196 97 7 chrX 68500765 68500919 -98149377 - RMER19C LTR ERVK -443 168 1 6 1107 182 382 64 25 chrX 68501053 68501257 -98149039 - L2 LINE L2 -501 2918 2707 7 1107 430 214 0 0 chrX 68502649 68502719 -98147577 + PB1D7 SINE Alu 1 70 -50 8 1107 12004 64 12 3 chrX 68502960 68505146 -98145150 - L1Md_F2 LINE L1 -14 6568 4361 9 1107 225 283 273 12 chrX 68505229 68505390 -98144906 - MIRb SINE MIR -41 227 25 1 1107 381 280 15 106 chrX 68505528 68505660 -98144636 + B4A SINE B4 5 124 -168 1 1107 291 122 0 0 chrX 68505733 68505782 -98144514 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1107 409 248 73 9 chrX 68506014 68506124 -98144172 + PB1D10 SINE Alu 1 117 0 1 1107 472 348 61 9 chrX 68506179 68506391 -98143905 + Lx8 LINE L1 7155 7377 -96 1 1107 342 115 0 0 chrX 68506446 68506498 -98143798 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 1107 448 216 14 0 chrX 68507626 68507700 -98142596 + B1_Mur4 SINE Alu 6 80 -70 1 1107 245 295 11 33 chrX 68508669 68508760 -98141536 - MER58C DNA MER1_type 0 215 127 1 1107 419 308 68 0 chrX 68509514 68509631 -98140665 - ID_B1 SINE B4 -6 218 94 1 1107 263 350 12 0 chrX 68510735 68510815 -98139481 + ID4_ SINE ID 1 81 -2 1 1107 4251 60 2 8 chrX 68511016 68511523 -98138773 + L1_Mus1 LINE L1 6063 6566 -1 2 1107 430 322 88 0 chrX 68511538 68511709 -98138587 + B3A SINE B2 3 188 -10 2 1107 1274 42 0 0 chrX 68511852 68511996 -98138300 - B1_Mus1 SINE Alu 0 148 5 2 1107 1188 75 0 7 chrX 68512388 68512535 -98137761 + B1_Mm SINE Alu 2 147 0 2 1107 306 0 0 0 chrX 68512809 68512843 -98137453 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2 1107 480 211 6 19 chrX 68513382 68513541 -98136755 + CT-rich Low_complexity Low_complexity 1 157 0 2 1107 825 270 53 25 chrX 68513542 68513813 -98136483 - ID_B1 SINE B4 -11 213 5 2 1107 685 278 43 22 chrX 68513921 68514105 -98136191 - ID_B1 SINE B4 -29 195 8 2 1107 6430 52 1 1 chrX 68514713 68515460 -98134836 + L1_Mus1 LINE L1 5811 6557 -10 2 1107 335 23 23 0 chrX 68515460 68515504 -98134792 + (TAA)n Simple_repeat Simple_repeat 1 45 0 2 1107 483 134 0 0 chrX 68515705 68515787 -98134509 + (CTCA)n Simple_repeat Simple_repeat 2 83 0 3 1107 242 198 43 129 chrX 68515817 68515910 -98134386 + MTE2b LTR MaLR 6 90 -289 3 1107 315 0 0 0 chrX 68516079 68516114 -98134182 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1107 3273 217 33 21 chrX 68516116 68516836 -98133460 - Lx9 LINE L1 -267 7377 6649 3 1107 1031 245 111 3 chrX 68516836 68517119 -98133177 + MTE2b LTR MaLR 66 370 0 3 1107 225 239 22 0 chrX 68518898 68518967 -98131329 + polypurine Low_complexity Low_complexity 1 70 0 3 1107 669 217 102 0 chrX 68520187 68520344 -98129952 + MIR SINE MIR 87 259 -3 3 1107 385 208 83 0 chrX 68520944 68521040 -98129256 - MIR SINE MIR -72 190 87 3 1107 594 0 0 0 chrX 68521537 68521603 -98128693 + (TC)n Simple_repeat Simple_repeat 2 67 0 3 1107 1176 59 0 0 chrX 68521603 68521739 -98128557 - B1_Mus2 SINE Alu -10 137 2 3 1107 713 221 211 21 chrX 68522402 68522592 -98127704 + B4 SINE B4 2 227 -65 3 1107 622 243 50 56 chrX 68522763 68522924 -98127372 + B3A SINE B2 39 198 0 4 1107 249 211 49 123 chrX 68522921 68523002 -98127294 + B4 SINE B4 217 291 -1 3 1107 3616 28 2 0 chrX 68523658 68524053 -98126243 + MTA_Mm LTR MaLR 1 396 0 4 1107 869 226 10 67 chrX 68524339 68524548 -98125748 - RMER30 DNA MER1_type 0 202 6 4 1107 842 255 57 19 chrX 68525597 68525809 -98124487 - B4A SINE B4 -22 270 51 4 1107 253 299 127 31 chrX 68525855 68526114 -98124182 - L1MC LINE L1 -1978 5904 5621 4 1107 216 0 0 0 chrX 68526231 68526255 -98124041 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1107 372 22 0 0 chrX 68526255 68526299 -98123997 + (GA)n Simple_repeat Simple_repeat 1 45 0 4 1107 375 317 66 70 chrX 68526328 68526569 -98123727 - MLT1E2 LTR MaLR -371 256 17 4 1107 466 323 37 25 chrX 68526886 68527048 -98123248 - MER68 LTR ERVL -2 605 422 4 1107 275 271 0 0 chrX 68527131 68527190 -98123106 - ID4 SINE ID -23 60 2 4 1107 280 305 16 25 chrX 68527310 68527431 -98122865 - Lx2 LINE L1 -1 6996 6877 5 1107 4563 167 43 74 chrX 68527447 68528366 -98121930 - RMER19B LTR ERVK -11 891 1 5 1107 4135 153 46 7 chrX 68528366 68529083 -98121213 - Lx2B LINE L1 -159 6841 6097 5 1107 2122 106 26 0 chrX 68529087 68529398 -98120898 - ORR1A2 LTR MaLR -8 319 1 5 1107 6045 150 41 73 chrX 68529400 68530683 -98119613 - Lx2B LINE L1 -902 6098 4871 5 1107 4108 54 8 2 chrX 68530683 68531168 -98119128 + L1_Mus2 LINE L1 6079 6566 0 5 1107 6045 151 48 113 chrX 68531168 68531437 -98118859 - Lx2B LINE L1 -1007 4870 4622 5 1107 236 309 18 0 chrX 68531449 68531504 -98118792 - B1_Mus1 SINE Alu -92 56 1 5 1107 474 88 0 0 chrX 68531966 68532034 -98118262 + (TG)n Simple_repeat Simple_repeat 2 69 0 5 1107 2259 272 140 28 chrX 68532034 68532924 -98117372 + Lx8 LINE L1 6475 7464 -9 5 1107 433 294 14 34 chrX 68533184 68533332 -98116964 + B1_Mur1 SINE Alu 3 147 -2 5 1107 402 298 155 17 chrX 68536769 68536950 -98113346 - L2 LINE L2 -510 2909 2704 5 1107 198 0 0 0 chrX 68537484 68537506 -98112790 + (TG)n Simple_repeat Simple_repeat 2 23 0 6 1107 1089 286 33 11 chrX 68538368 68538640 -98111656 + B4A SINE B4 9 286 -6 6 1107 393 22 0 0 chrX 68538671 68538717 -98111579 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1107 189 94 0 0 chrX 68539353 68539385 -98110911 + (T)n Simple_repeat Simple_repeat 1 32 0 6 1107 521 326 14 0 chrX 68542427 68542571 -98107725 + RSINE1 SINE B4 3 148 -17 6 1107 216 0 0 0 chrX 68542580 68542604 -98107692 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 1107 297 250 234 0 chrX 68542674 68542798 -98107498 - B3 SINE B2 -4 212 60 6 1107 412 55 0 0 chrX 68542798 68542853 -98107443 + L1_Mus2 LINE L1 6511 6565 -1 6 1107 1968 71 0 0 chrX 68542921 68543159 -98107137 - L1_Mus1 LINE L1 0 6567 6330 6 1107 6261 86 11 4 chrX 68543159 68544182 -98106114 + L1_Mus1 LINE L1 5023 6056 -511 6 1107 543 223 10 0 chrX 68545251 68545354 -98104942 + ID_B1 SINE B4 107 210 -14 7 1107 459 152 0 0 chrX 68545358 68545437 -98104859 + GA-rich Low_complexity Low_complexity 3 81 0 7 1107 348 327 9 0 chrX 68545978 68546088 -98104208 - PB1D7 SINE Alu -2 118 8 7 1107 344 342 36 9 chrX 68546222 68546334 -98103962 + Tigger15a DNA TcMar 4 118 -597 7 1107 358 238 236 42 chrX 68547745 68547896 -98102400 + B3A SINE B2 1 139 -54 7 1107 202 379 122 17 chrX 68548553 68548725 -98101571 + MIRb SINE MIR 3 192 -76 7 1107 206 343 89 20 chrX 68548771 68548917 -98101379 - MIRb SINE MIR -93 175 20 7 1107 407 189 2 11 chrX 68550172 68550260 -98100036 + L1MC3 LINE L1 7513 7587 -198 7 1108 241 219 78 52 chrX 68551070 68551147 -98099149 - MLT1D LTR MaLR -126 379 301 7 1108 2379 68 0 0 chrX 68551513 68551805 -98098491 + L1Md_F2 LINE L1 6291 6582 0 7 1108 234 91 0 0 chrX 68552036 68552069 -98098227 + (A)n Simple_repeat Simple_repeat 1 33 0 8 1108 537 280 37 25 chrX 68552369 68552530 -98097766 + RSINE1 SINE B4 3 165 0 8 1108 623 184 176 0 chrX 68553029 68553154 -98097142 + B1_Mur1 SINE Alu 3 149 0 8 1108 383 223 106 10 chrX 68553299 68553403 -98096893 + B1F SINE Alu 36 149 0 8 1108 807 281 10 34 chrX 68553635 68553841 -98096455 - B3 SINE B2 -15 201 1 8 1108 824 244 111 24 chrX 68554230 68554400 -98095896 - B4 SINE B4 -18 274 84 8 1108 297 0 0 0 chrX 68554400 68554433 -98095863 + (TTGG)n Simple_repeat Simple_repeat 2 34 0 8 1108 824 244 111 24 chrX 68554433 68554514 -98095782 - B4 SINE B4 -209 83 2 8 1108 493 307 30 78 chrX 68554544 68554710 -98095586 + RSINE1 SINE B4 8 165 0 8 1108 3920 67 2 56 chrX 68556001 68556521 -98093775 + L1_Mus2 LINE L1 6075 6566 0 8 1108 411 252 53 18 chrX 68556558 68556671 -98093625 - Lx7 LINE L1 -462 7234 7118 8 1108 495 266 35 14 chrX 68556884 68557029 -98093267 + B1F SINE Alu 1 148 -1 9 1108 441 0 0 0 chrX 68557074 68557123 -98093173 + (TA)n Simple_repeat Simple_repeat 2 50 0 9 1108 972 290 17 58 chrX 68557433 68557726 -98092570 + B4 SINE B4 4 284 -8 9 1108 566 219 0 25 chrX 68558371 68558493 -98091803 + L1MA4 LINE L1 5542 5660 -640 9 1108 300 288 86 9 chrX 68558494 68558599 -98091697 + ID_B1 SINE B4 80 192 -32 9 1108 296 239 0 69 chrX 68558640 68558712 -98091584 + RSINE1 SINE B4 2 68 -97 9 1108 2301 118 152 8 chrX 68558712 68559080 -98091216 - MTC LTR MaLR 0 421 1 9 1108 349 211 28 25 chrX 68559102 68559237 -98091059 - MTC LTR MaLR -265 154 26 9 1108 541 271 68 55 chrX 68559378 68559597 -98090699 + L1MA4 LINE L1 5677 5898 -402 9 1108 258 51 0 25 chrX 68559753 68559793 -98090503 + ORR1E LTR MaLR 88 126 -233 9 1108 644 208 69 8 chrX 68561360 68561491 -98088805 + ID_B1 SINE B4 84 222 -2 9 1108 283 170 38 0 chrX 68561711 68561764 -98088532 + B1F1 SINE Alu 94 148 -1 1 1108 302 354 55 22 chrX 68562283 68562465 -98087831 - L2c LINE L2 -5 3382 3195 1 1108 466 357 118 41 chrX 68563714 68563920 -98086376 + L2a LINE L2 2437 2649 -770 1 1108 992 238 19 15 chrX 68563920 68564125 -98086171 + B3 SINE B2 2 207 -9 1 1108 466 357 118 41 chrX 68564125 68564450 -98085846 + L2a LINE L2 2650 3009 -410 1 1108 227 253 181 0 chrX 68564611 68564694 -98085602 + L2a LINE L2 3288 3385 -41 1 1108 1225 181 147 58 chrX 68564983 68565196 -98085100 - MTEb LTR MaLR -2 377 143 1 1108 279 0 0 0 chrX 68565196 68565227 -98085069 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1108 1225 181 147 58 chrX 68565227 68565359 -98084937 - MTEb LTR MaLR -237 142 1 1 1108 319 309 146 30 chrX 68565426 68565699 -98084597 + MLT1D LTR MaLR 175 501 -4 1 1108 369 246 249 12 chrX 68565813 68565982 -98084314 - Tigger9a DNA Tigger -394 338 130 1 1108 322 287 0 11 chrX 68566005 68566093 -98084203 + L1ME3 LINE L1 6045 6131 -31 1 1108 294 293 12 0 chrX 68568618 68568700 -98081596 - ID_B1 SINE B4 -20 204 122 1 1108 180 0 0 0 chrX 68568866 68568886 -98081410 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1108 416 279 99 55 chrX 68568887 68569069 -98081227 - ID_B1 SINE B4 -18 206 17 1 1108 1302 34 0 0 chrX 68569638 68569784 -98080512 - B1_Mus2 SINE Alu 0 147 2 1 1108 226 338 78 26 chrX 68570021 68570252 -98080044 + L1M5 LINE L1 5695 5937 -303 1 1108 835 191 0 0 chrX 68570914 68571050 -98079246 + B1_Mur4 SINE Alu 4 139 -11 1 1108 358 134 188 40 chrX 68571989 68572090 -98078206 - Lx7 LINE L1 0 7696 7581 1 1108 503 204 46 0 chrX 68572088 68572196 -98078100 - Lx7 LINE L1 -606 7090 6978 1 1108 1177 275 163 14 chrX 68572181 68572656 -98077640 - Lx6 LINE L1 0 7460 6561 1 1108 2851 212 88 23 chrX 68572690 68573211 -98077085 - Lx5 LINE L1 -673 6377 5832 1 1108 315 0 0 0 chrX 68573211 68573246 -98077050 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1108 2851 146 182 18 chrX 68573246 68573632 -98076664 - Lx5 LINE L1 -1219 5831 5359 1 1108 3802 148 71 22 chrX 68573627 68574361 -98075935 + Lx5 LINE L1 4593 5362 -515 1 1108 3574 180 21 42 chrX 68574357 68575031 -98075265 - Lx7 LINE L1 -679 7017 6358 1 1108 7465 18 1 2 chrX 68575045 68575896 -98074400 - L1Md_F3 LINE L1 0 6584 5735 1 1108 4653 137 71 4 chrX 68575896 68576587 -98073709 - RMER19A LTR ERVK 0 737 1 1 1108 1580 194 88 21 chrX 68576591 68576964 -98073332 - Lx7 LINE L1 -1337 6359 5962 1 1108 7977 83 18 6 chrX 68577154 68578290 -98072006 - L1_Mus4 LINE L1 -2 6634 5522 1 1108 1316 134 29 11 chrX 68578592 68578822 -98071474 - ORR1B1 LTR MaLR -1 393 147 1 1108 266 143 0 0 chrX 68578802 68578844 -98071452 - ORR1B1 LTR MaLR -352 42 1 1 1108 547 318 106 31 chrX 68579367 68579659 -98070637 + MLT1D LTR MaLR 113 426 -79 1 1108 207 0 0 0 chrX 68579965 68579988 -98070308 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1108 4259 52 0 4 chrX 68579989 68580509 -98069787 + L1Md_F2 LINE L1 5069 5586 -297 1 1108 8376 48 16 1 chrX 68580511 68581490 -98068806 + L1Md_F2 LINE L1 5589 6582 0 1 1108 554 295 0 30 chrX 68581562 68581695 -98068601 - B1F2 SINE Alu -20 129 1 1 1108 372 43 0 0 chrX 68581731 68581777 -98068519 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1 1108 4661 178 67 101 chrX 68581796 68582579 -98067717 - Lx5 LINE L1 -45 7005 6172 1 1108 548 209 19 9 chrX 68582579 68582685 -98067611 - RLTR22_Mur LTR ERVK -1741 107 1 1 1108 4661 178 67 101 chrX 68582685 68582924 -98067372 - Lx5 LINE L1 -45 6171 5916 1 1108 4066 47 0 15 chrX 68582927 68583402 -98066894 - L1Md_F2 LINE L1 -12 6570 6103 1 1108 1908 30 4 33 chrX 68583406 68583648 -98066648 + L1Md_F2 LINE L1 5847 6081 -501 1 1108 1025 278 86 28 chrX 68583816 68584249 -98066047 + L1MC1 LINE L1 5394 5851 -482 1 1108 452 255 225 7 chrX 68584248 68584386 -98065910 - Lx8 LINE L1 -153 7320 7153 1 1108 268 259 52 0 chrX 68584391 68584449 -98065847 - Lx8 LINE L1 -260 7213 7153 1 1108 330 250 36 36 chrX 68584429 68584512 -98065784 - Lx8 LINE L1 -238 7235 7153 1 1108 554 203 98 30 chrX 68584493 68584625 -98065671 - Lx8 LINE L1 -239 7234 7094 1 1108 1493 247 97 30 chrX 68584826 68585219 -98065077 - MTD LTR MaLR 0 419 1 1 1108 383 314 71 67 chrX 68585407 68585551 -98064745 + LTR41 LTR ERVL 19 161 -607 1 1108 464 239 0 96 chrX 68585551 68585676 -98064620 - PB1D10 SINE Alu -4 113 1 1 1108 383 314 71 67 chrX 68585676 68585756 -98064540 + LTR41 LTR ERVL 162 244 -524 1 1108 482 274 0 0 chrX 68585834 68585940 -98064356 - PB1D10 SINE Alu -8 109 4 1 1108 290 217 96 40 chrX 68585988 68586113 -98064183 + L1MC LINE L1 5724 5855 -478 1 1108 3997 108 9 0 chrX 68586153 68586736 -98063560 + L1_Mus3 LINE L1 6087 6638 0 1 1108 842 221 102 5 chrX 68586770 68586966 -98063330 + B3 SINE B2 2 216 0 1 1108 360 0 0 0 chrX 68587224 68587264 -98063032 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1108 23926 116 89 94 chrX 68587418 68590656 -98059640 + L1_Mus1 LINE L1 264 3774 -2109 1 1108 477 0 0 0 chrX 68590656 68590709 -98059587 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1108 23926 101 92 122 chrX 68590709 68591900 -98058396 + L1_Mus1 LINE L1 3775 4606 -1277 1 1108 8585 43 5 2 chrX 68591900 68592893 -98057403 + L1Md_F2 LINE L1 5587 6582 0 1 1108 23926 101 92 122 chrX 68592893 68593026 -98057270 + L1_Mus1 LINE L1 4607 4733 -1150 1 1108 206 32 32 0 chrX 68593026 68593057 -98057239 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 1108 23926 73 47 56 chrX 68593057 68594899 -98055397 + L1_Mus1 LINE L1 4734 6567 0 1 1108 289 194 65 0 chrX 68594899 68594961 -98055335 + L1MD1 LINE L1 6033 6098 -144 1 1108 9207 89 42 6 chrX 68595136 68596504 -98053792 - MusHAL1 LINE L1 -626 2086 669 1 1108 216 149 0 0 chrX 68596916 68596963 -98053333 + (CAT)n Simple_repeat Simple_repeat 3 49 0 1 1108 5856 158 25 17 chrX 68596963 68597900 -98052396 - Lx4A LINE L1 -11 7047 6104 1 1108 462 18 0 0 chrX 68598443 68598498 -98051798 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1108 1385 248 26 47 chrX 68599710 68600103 -98050193 - MTE2a LTR MaLR 0 419 18 1 1108 274 295 172 36 chrX 68600108 68600492 -98049804 + L1M5 LINE L1 4407 4842 -1304 1 1108 479 262 195 0 chrX 68600654 68600803 -98049493 + B3A SINE B2 5 182 -16 1 1108 22 0 0 0 chrX 68601086 68601108 -98049188 + AT_rich Low_complexity Low_complexity 1 22 0 1 1108 357 293 114 12 chrX 68601233 68601399 -98048897 - LTR55 LTR ERV -18 530 348 1 1108 579 294 32 21 chrX 68601496 68601684 -98048612 + Lx8 LINE L1 7034 7223 -250 1 1108 905 140 44 6 chrX 68601733 68601891 -98048405 + URR1B DNA MER1_type 60 223 -2 1 1108 286 299 26 61 chrX 68601918 68602032 -98048264 + Lx8 LINE L1 7153 7262 -211 1 1108 477 282 56 7 chrX 68602032 68602175 -98048121 + RMER15 LTR ERVL 425 574 -1 1 1108 493 162 162 0 chrX 68602468 68602567 -98047729 + RMER21B LTR ERV1 34 148 -694 1 1108 602 211 151 59 chrX 68602660 68602846 -98047450 + RMER21B LTR ERV1 365 567 -275 1 1108 1012 304 35 16 chrX 68603027 68603404 -98046892 + RMER15-int LTR ERVL 305 688 -4311 1 1108 2862 259 62 37 chrX 68603556 68604362 -98045934 + RMER15-int LTR ERVL 943 1768 -3231 1 1108 1055 79 0 0 chrX 68604507 68604646 -98045650 + B1_Mm SINE Alu 9 147 0 1 1108 1919 171 63 68 chrX 68604649 68605075 -98045221 - L1_Mur2 LINE L1 -828 5049 4626 1 1108 934 123 73 68 chrX 68605277 68605304 -98044992 - B2_Mm2 SINE B2 -2 193 166 1 1108 372 43 0 0 chrX 68605304 68605350 -98044946 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1 1108 934 123 73 68 chrX 68605350 68605514 -98044782 - B2_Mm2 SINE B2 -30 165 1 1 1108 1089 203 59 5 chrX 68605860 68606063 -98044233 + B3 SINE B2 1 214 -2 1 1108 1270 129 6 11 chrX 68606073 68606253 -98044043 + B2_Mm1t SINE B2 1 179 -14 1 1108 385 74 12 58 chrX 68606295 68606371 -98043925 + B2_Mm2 SINE B2 46 123 -75 1 1108 208 98 49 0 chrX 68606380 68606421 -98043875 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 1108 252 291 25 0 chrX 68606730 68606809 -98043487 - MER52-int LTR ERV1 -3792 3299 3219 1 1108 1058 155 7 0 chrX 68606814 68606962 -98043334 + B1_Mur4 SINE Alu 1 149 -1 1 1108 2925 116 22 34 chrX 68609035 68609482 -98040814 + Lx LINE L1 6203 6644 -10 1 1108 1813 260 85 58 chrX 68609594 68610300 -98039996 + Lx7 LINE L1 6565 7289 -407 1 1108 204 192 0 64 chrX 68610300 68610378 -98039918 + T-rich Low_complexity Low_complexity 2 74 0 1 1108 296 194 114 19 chrX 68610392 68610497 -98039799 + Lx8 LINE L1 7358 7472 -1 1 1108 21 0 0 0 chrX 68610497 68610518 -98039778 + AT_rich Low_complexity Low_complexity 1 21 0 1 1108 290 222 0 0 chrX 68610637 68610700 -98039596 + MT2B LTR ERVL 1 63 -538 1 1108 459 95 0 0 chrX 68610667 68610730 -98039566 - MT2B LTR ERVL -538 63 1 1 1108 260 79 0 0 chrX 68610730 68610768 -98039528 - MERVL-int LTR ERVL 0 5485 5448 1 1108 279 135 0 55 chrX 68610768 68610823 -98039473 - ORR1A3-int LTR MaLR -1323 640 589 1 1108 644 36 0 12 chrX 68611402 68611486 -98038810 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 1 1108 915 229 38 14 chrX 68611486 68611699 -98038597 + Lx8 LINE L1 6266 6483 -990 1 1108 553 156 62 0 chrX 68611713 68611809 -98038487 - MTC LTR MaLR -55 366 265 1 1108 1289 76 0 0 chrX 68611809 68611981 -98038315 + Lx LINE L1 6328 6499 -155 1 1108 1100 289 61 27 chrX 68611985 68612397 -98037899 + Lx8 LINE L1 6492 6917 -556 1 1108 524 153 16 1 chrX 68612420 68612522 -98037774 - B1_Mur3 SINE Alu -1 148 44 1 1108 352 252 83 45 chrX 68612522 68612655 -98037641 + Lx8 LINE L1 6934 7071 -402 1 1108 226 219 43 86 chrX 68612821 68612891 -98037405 + RMER15 LTR ERVL 392 458 -117 1 1108 677 310 27 27 chrX 68612959 68613178 -98037118 + MTEb LTR MaLR 80 298 -81 1 1108 5675 84 0 32 chrX 68613192 68614094 -98036202 - L1_Mm LINE L1 -3456 2427 1555 1 1108 468 206 194 8 chrX 68614095 68614284 -98036012 + RLTR21 LTR ERVK 1017 1228 -344 1 1108 2193 140 146 75 chrX 68614286 68614382 -98035914 + RLTR21 LTR ERVK 1059 1128 -444 1 1108 525 16 0 0 chrX 68614382 68614444 -98035852 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 1108 2193 140 146 75 chrX 68614444 68614557 -98035739 + RLTR21 LTR ERVK 1129 1306 -266 1 1108 423 0 0 0 chrX 68614557 68614604 -98035692 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 1108 2193 140 146 75 chrX 68614604 68614872 -98035424 + RLTR21 LTR ERVK 1307 1570 -2 1 1108 389 198 0 29 chrX 68614872 68614976 -98035320 + Lx8 LINE L1 7373 7473 0 1 1108 213 39 0 0 chrX 68615045 68615071 -98035225 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1108 2016 69 35 118 chrX 68615099 68615445 -98034851 + ORR1A2 LTR MaLR 3 319 -8 1 1108 305 268 24 24 chrX 68615460 68615544 -98034752 - MLT1B LTR MaLR -43 347 264 1 1108 1340 149 4 4 chrX 68615545 68615780 -98034516 - Lx2B LINE L1 -2 6998 6764 1 1108 415 314 15 69 chrX 68615791 68615921 -98034375 - MLT1B LTR MaLR -63 327 205 1 1108 1235 284 15 92 chrX 68615984 68616438 -98033858 - MTD LTR MaLR 0 419 1 1 1108 577 268 28 7 chrX 68616668 68616811 -98033485 + B1F2 SINE Alu 3 148 -1 1 1108 1201 54 0 13 chrX 68617061 68617210 -98033086 - B1_Mus1 SINE Alu 0 148 2 1 1108 306 0 0 0 chrX 68618507 68618541 -98031755 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1108 24 0 0 0 chrX 68618559 68618583 -98031713 + GC_rich Low_complexity Low_complexity 1 24 0 1 1108 243 0 0 0 chrX 68620174 68620201 -98030095 + (CAGGT)n Simple_repeat Simple_repeat 2 28 0 2 1108 333 299 21 63 chrX 68620330 68620473 -98029823 - MIRc SINE MIR -129 139 3 2 1108 326 343 59 7 chrX 68620988 68621123 -98029173 + B1F SINE Alu 1 142 -7 2 1108 325 228 164 109 chrX 68621143 68621271 -98029025 + B1_Mur2 SINE Alu 5 139 -10 2 1108 193 233 200 0 chrX 68621694 68621754 -98028542 + MIRc SINE MIR 77 148 -120 2 1108 214 194 0 29 chrX 68622264 68622333 -98027963 + (TA)n Simple_repeat Simple_repeat 2 68 0 2 1108 817 240 66 5 chrX 68622415 68622612 -98027684 - B3 SINE B2 -6 210 2 2 1108 606 221 15 23 chrX 68622747 68622877 -98027419 + ID_B1 SINE B4 89 217 -7 2 1108 211 258 0 31 chrX 68623430 68623494 -98026802 + B1_Mur1 SINE Alu 67 128 -21 2 1108 1203 56 0 0 chrX 68623793 68623936 -98026360 + B1_Mus1 SINE Alu 1 143 -5 2 1108 234 0 0 0 chrX 68623939 68623965 -98026331 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 1108 261 118 0 0 chrX 68624071 68624122 -98026174 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 2 1108 188 35 35 0 chrX 68624273 68624302 -98025994 + (TTG)n Simple_repeat Simple_repeat 1 30 0 2 1108 470 287 0 42 chrX 68624778 68624898 -98025398 + B1F SINE Alu 34 148 -1 2 1108 310 327 18 47 chrX 68625460 68625679 -98024617 + C-rich Low_complexity Low_complexity 1 212 0 2 1108 190 302 8 8 chrX 68625692 68625822 -98024474 + CT-rich Low_complexity Low_complexity 1 130 0 2 1108 321 303 24 90 chrX 68625873 68626040 -98024256 - HAL1-3A_ME LINE L1 -419 2439 2284 2 1108 421 265 26 13 chrX 68626145 68626298 -98023998 + CT-rich Low_complexity Low_complexity 2 156 0 2 1108 22 0 0 0 chrX 68626768 68626790 -98023506 + AT_rich Low_complexity Low_complexity 1 22 0 2 1108 2992 251 123 10 chrX 68628179 68629067 -98021229 - Lx8 LINE L1 -296 7177 6190 2 1108 352 252 78 35 chrX 68629680 68629795 -98020501 + Tigger16b DNA Tigger 198 317 -20 2 1108 183 80 0 0 chrX 68630508 68630533 -98019763 + (CATA)n Simple_repeat Simple_repeat 3 27 0 2 1108 783 167 204 0 chrX 68632600 68632762 -98017534 + B3 SINE B2 15 209 -7 2 1108 914 90 82 0 chrX 68634206 68634340 -98015956 + B1_Mus2 SINE Alu 2 146 -1 2 1108 233 268 169 0 chrX 68634435 68634506 -98015790 + ID4 SINE ID 1 83 0 2 1108 319 360 0 0 chrX 68634590 68634665 -98015631 + ID4 SINE ID 6 80 -3 2 1108 261 228 0 0 chrX 68635058 68635115 -98015181 - Charlie14a DNA MER1_type -1107 57 1 2 1108 228 286 159 19 chrX 68635164 68635271 -98015025 - MamRep605 Unknown Unknown -54 822 701 2 1108 297 0 0 0 chrX 68635787 68635820 -98014476 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1108 276 30 0 0 chrX 68635820 68635852 -98014444 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 1108 412 238 133 24 chrX 68637959 68638194 -98012102 - L1MD2 LINE L1 -268 6084 5804 2 1108 352 250 175 0 chrX 68638253 68638421 -98011875 - L1MD2 LINE L1 -1955 4364 4161 2 1108 315 232 176 6 chrX 68638567 68638732 -98011564 - L1MD2 LINE L1 -3088 3231 3039 2 1108 254 250 50 0 chrX 68638733 68638793 -98011503 + ID_B1 SINE B4 109 171 -53 2 1108 610 275 174 15 chrX 68638866 68639275 -98011021 - L1MD2 LINE L1 -3286 3033 2560 2 1108 1168 68 0 20 chrX 68639276 68639426 -98010870 + B1_Mus2 SINE Alu 1 147 0 2 1108 231 88 0 0 chrX 68639428 68639462 -98010834 + (A)n Simple_repeat Simple_repeat 1 34 0 2 1108 862 292 48 0 chrX 68639648 68639857 -98010439 - ID_B1 SINE B4 -5 219 1 2 1108 324 169 234 31 chrX 68640132 68640260 -98010036 - L1MA8 LINE L1 -379 5912 5759 2 1108 479 306 65 16 chrX 68640261 68640447 -98009849 - L1MD2 LINE L1 -3969 2431 2237 2 1108 374 230 8 103 chrX 68640450 68640576 -98009720 - BC1_Mm scRNA scRNA -30 122 9 2 1108 509 0 0 15 chrX 68640615 68640680 -98009616 - B1_Mus2 SINE Alu -1 146 83 2 1108 744 146 83 55 chrX 68640722 68640867 -98009429 - B1_Mur2 SINE Alu 0 149 1 2 1108 23 33 0 0 chrX 68641248 68641278 -98009018 + AT_rich Low_complexity Low_complexity 1 30 0 2 1108 288 221 0 42 chrX 68642643 68642714 -98007582 - ID4 SINE ID -15 68 1 2 1108 184 225 25 0 chrX 68642963 68643003 -98007293 + L2c LINE L2 3042 3082 -305 2 1108 199 347 0 0 chrX 68643135 68643210 -98007086 + L4 LINE RTE 971 1045 -984 2 1108 186 43 0 0 chrX 68643267 68643290 -98007006 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1108 354 240 8 133 chrX 68643306 68643321 -98006975 - MT2B LTR ERVL -330 271 167 2 1108 587 229 0 0 chrX 68643321 68643426 -98006870 - B1_Mur1 SINE Alu -42 107 3 2 1108 936 202 73 39 chrX 68643427 68643633 -98006663 - B3 SINE B2 -1 215 3 2 1108 757 213 15 0 chrX 68643792 68643928 -98006368 + B1_Mur1 SINE Alu 9 146 -3 2 1108 339 25 0 0 chrX 68644224 68644264 -98006032 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1108 967 160 0 0 chrX 68645225 68645369 -98004927 + B1_Mur4 SINE Alu 1 144 -6 2 1108 828 148 12 6 chrX 68645377 68645547 -98004749 + GA-rich Low_complexity Low_complexity 2 172 0 2 1108 549 80 0 0 chrX 68646032 68646107 -98004189 + (TCCC)n Simple_repeat Simple_repeat 3 77 0 2 1108 229 320 0 0 chrX 68646218 68646268 -98004028 - ID4_ SINE ID -25 58 9 2 1108 214 271 33 17 chrX 68647213 68647273 -98003023 - MIR3 SINE MIR -6 202 142 2 1108 208 362 75 60 chrX 68648112 68648394 -98001902 + L2 LINE L2 2141 2426 -993 2 1108 488 347 96 38 chrX 68648770 68649114 -98001182 - MLT1D LTR MaLR -136 369 6 2 1108 27 29 0 0 chrX 68649292 68649326 -98000970 + AT_rich Low_complexity Low_complexity 1 34 0 2 1108 684 195 81 0 chrX 68649345 68649530 -98000766 - L1MA8 LINE L1 -22 6269 6070 2 1108 322 331 14 14 chrX 68650642 68650783 -97999513 + CT-rich Low_complexity Low_complexity 5 145 0 2 1108 987 269 86 0 chrX 68651716 68652133 -97998163 - L1MB5 LINE L1 -8 6166 5714 2 1108 243 303 11 0 chrX 68652130 68652219 -97998077 + L1MB5 LINE L1 5619 5708 -466 2 1108 383 299 75 50 chrX 68652619 68652789 -97997507 + MLT1B LTR MaLR 1 159 -308 2 1108 463 274 60 33 chrX 68652789 68652940 -97997356 - RSINE1 SINE B4 -10 155 1 2 1108 311 340 75 106 chrX 68652940 68653062 -97997234 + MLT1B LTR MaLR 160 284 -183 2 1108 1194 267 148 3 chrX 68653087 68653418 -97996878 + MTEb LTR MaLR 1 379 0 2 1108 467 202 38 9 chrX 68654122 68654227 -97996069 - ID_B1 SINE B4 -9 215 108 2 1108 605 315 47 29 chrX 68654296 68654466 -97995830 - B3A SINE B2 -25 173 1 2 1108 252 331 106 41 chrX 68654447 68654473 -97995823 - B4 SINE B4 -43 249 164 2 1108 369 239 186 8 chrX 68654473 68654591 -97995705 - B1_Mus2 SINE Alu -1 146 8 2 1108 252 331 106 41 chrX 68654591 68654617 -97995679 - B4 SINE B4 -43 163 69 2 1108 24 32 0 0 chrX 68654637 68654668 -97995628 + AT_rich Low_complexity Low_complexity 1 31 0 2 1108 2169 151 173 53 chrX 68655222 68655552 -97994744 + RMER12 LTR ERVK 557 891 -431 2 1108 396 40 0 0 chrX 68655552 68655602 -97994694 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1108 2169 151 173 53 chrX 68655602 68655796 -97994500 + RMER12 LTR ERVK 892 1143 -179 2 1108 366 262 173 10 chrX 68655832 68656029 -97994267 + RLTR21 LTR ERVK 1344 1572 0 2 1108 484 286 109 30 chrX 68656034 68656337 -97993959 + L1MB4 LINE L1 5854 6180 0 2 1108 222 303 86 47 chrX 68656393 68656521 -97993775 + B3 SINE B2 82 214 -2 2 1108 683 203 0 50 chrX 68656610 68656750 -97993546 - B1_Mur1 SINE Alu -5 144 12 2 1108 3376 40 2 0 chrX 68657119 68657514 -97992782 - MTA_Mm LTR MaLR 0 396 1 2 1108 232 303 11 11 chrX 68659224 68659314 -97990982 - MER5A1 DNA MER1_type 0 166 77 2 1108 632 206 186 26 chrX 68659347 68659541 -97990755 - URR1B DNA MER1_type 0 225 1 2 1108 22 0 0 0 chrX 68660214 68660236 -97990060 + AT_rich Low_complexity Low_complexity 1 22 0 2 1108 305 300 0 24 chrX 68661061 68661143 -97989153 - ID4 SINE ID -2 81 2 2 1108 480 211 0 119 chrX 68661412 68661589 -97988707 - L1M5 LINE L1 -2241 3905 3750 2 1108 7442 156 42 28 chrX 68662005 68663685 -97986611 - Lx5 LINE L1 -8 7042 5332 2 1108 27 29 0 0 chrX 68663689 68663723 -97986573 + AT_rich Low_complexity Low_complexity 1 34 0 2 1108 636 282 41 92 chrX 68664309 68664504 -97985792 - B3 SINE B2 -9 186 2 2 1108 416 196 11 0 chrX 68664840 68664932 -97985364 - L1MB8 LINE L1 -233 5945 5853 2 1108 513 71 0 0 chrX 68664954 68665024 -97985272 + (TC)n Simple_repeat Simple_repeat 1 70 0 2 1108 423 157 0 0 chrX 68665025 68665108 -97985188 + L1_Mur2 LINE L1 2061 2143 -3734 2 1108 195 338 113 31 chrX 68665874 68666033 -97984263 - L2 LINE L2 -1751 1668 1497 2 1108 198 0 0 0 chrX 68666303 68666325 -97983971 + (TCC)n Simple_repeat Simple_repeat 2 23 0 2 1108 276 30 0 0 chrX 68667539 68667572 -97982724 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2 1108 1053 58 14 41 chrX 68667575 68667720 -97982576 - B1_Mus1 SINE Alu -5 143 3 2 1108 1890 191 80 37 chrX 68669163 68669565 -97980731 + MTD LTR MaLR 1 419 0 2 1108 430 204 32 0 chrX 68671738 68671831 -97978465 + B1F SINE Alu 46 141 -8 2 1108 183 184 0 0 chrX 68675295 68675333 -97974963 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1108 552 228 29 7 chrX 68676695 68676832 -97973464 + ID_B1 SINE B4 76 215 -9 2 1108 481 264 8 23 chrX 68679956 68680088 -97970208 - B1F1 SINE Alu -7 142 13 2 1109 283 273 33 98 chrX 68682601 68682723 -97967573 + MLT1A1 LTR MaLR 7 120 -288 2 1109 3234 36 12 25 chrX 68682913 68683314 -97966982 + MTA_Mm LTR MaLR 1 396 0 2 1109 426 20 0 0 chrX 68684085 68684136 -97966160 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1109 248 232 41 55 chrX 68684425 68684498 -97965798 + L1MC1 LINE L1 6238 6309 -24 2 1109 831 220 22 22 chrX 68684628 68684809 -97965487 + B3 SINE B2 25 205 -11 2 1109 23 33 0 0 chrX 68684809 68684839 -97965457 + AT_rich Low_complexity Low_complexity 1 30 0 2 1109 328 283 56 19 chrX 68684857 68684965 -97965331 - PB1D10 SINE Alu 0 117 6 3 1109 478 276 8 8 chrX 68685192 68685309 -97964987 + B4A SINE B4 168 284 -8 3 1109 369 0 0 0 chrX 68685350 68685391 -97964905 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1109 203 286 0 0 chrX 68685805 68685868 -97964428 + GA-rich Low_complexity Low_complexity 2 64 0 3 1109 298 315 46 0 chrX 68685912 68686020 -97964276 + PB1D10 SINE Alu 5 117 0 3 1109 626 301 75 5 chrX 68686148 68686456 -97963840 + L1M3 LINE L1 5299 5643 -521 3 1109 401 256 94 67 chrX 68686458 68686639 -97963657 + MLT1A LTR MaLR 3 188 -202 3 1109 262 250 115 64 chrX 68686737 68686914 -97963382 + L1M3 LINE L1 5647 5823 -361 3 1109 237 366 47 47 chrX 68686997 68687252 -97963044 + L1M5 LINE L1 5411 5665 -459 3 1109 383 256 91 23 chrX 68687997 68688129 -97962167 + MLT1A1 LTR MaLR 268 408 0 3 1109 210 311 117 0 chrX 68688504 68688607 -97961689 + PB1D9 SINE Alu 1 115 -5 3 1109 195 42 0 0 chrX 68690240 68690264 -97960032 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1109 245 241 34 57 chrX 68690523 68690611 -97959685 - RLTR18 LTR ERVK -82 534 449 3 1109 207 0 0 0 chrX 68690716 68690739 -97959557 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1109 320 211 0 0 chrX 68690741 68690812 -97959484 - Lx6 LINE L1 -6 7454 7384 3 1109 195 162 0 0 chrX 68691558 68691595 -97958701 + GA-rich Low_complexity Low_complexity 3 39 0 3 1109 305 274 129 35 chrX 68691610 68691780 -97958516 + MLT1E1A LTR MaLR 2 187 -467 3 1109 324 238 99 69 chrX 68691888 68692019 -97958277 + MLT1E1A LTR MaLR 436 570 -110 3 1109 514 307 145 60 chrX 68692126 68692642 -97957654 + Charlie1a DNA MER1_type 310 869 -586 3 1109 465 125 98 24 chrX 68692997 68693120 -97957176 - Lx3_Mus LINE L1 -8 7001 6870 3 1109 315 0 0 0 chrX 68693157 68693192 -97957104 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1109 529 208 100 42 chrX 68693257 68693518 -97956778 + Charlie1a DNA MER1_type 1133 1408 -47 3 1109 1691 174 100 3 chrX 68693820 68694161 -97956135 + MTC LTR MaLR 1 374 -47 3 1109 438 149 0 0 chrX 68694805 68694892 -97955404 + (CA)n Simple_repeat Simple_repeat 2 88 0 3 1109 469 250 79 5 chrX 68695150 68695339 -97954957 + L1M3 LINE L1 4929 5131 -1009 3 1109 744 191 55 12 chrX 68695340 68695504 -97954792 + B3 SINE B2 2 172 -44 3 1109 189 74 0 0 chrX 68695510 68695537 -97954759 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1109 297 0 0 0 chrX 68695563 68695596 -97954700 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1109 612 101 0 0 chrX 68695596 68695685 -97954611 + (GA)n Simple_repeat Simple_repeat 2 90 0 3 1109 287 246 40 95 chrX 68695842 68695968 -97954328 + MT2B LTR ERVL 139 257 -344 3 1109 615 192 69 8 chrX 68695873 68696004 -97954292 + B1_Mus1 SINE Alu 10 148 0 3 1109 226 147 29 0 chrX 68696013 68696081 -97954215 + (CAAA)n Simple_repeat Simple_repeat 2 71 0 3 1109 335 208 257 29 chrX 68696149 68696318 -97953978 + ORR1E LTR MaLR 1 249 -130 3 1109 237 311 44 0 chrX 68696383 68696473 -97953823 + L1MD2 LINE L1 4041 4134 -2012 3 1109 1073 286 114 31 chrX 68696630 68697243 -97953053 + L1MD2 LINE L1 4475 5138 -1008 3 1109 307 222 0 110 chrX 68697275 68697366 -97952930 + PB1D10 SINE Alu 31 111 -6 3 1109 1836 252 109 10 chrX 68697580 68698296 -97952000 + L1M3 LINE L1 3187 3973 -2167 3 1109 636 275 358 7 chrX 68698297 68698576 -97951720 + MTE2a LTR MaLR 1 377 -2 3 1109 554 247 6 0 chrX 68698587 68698745 -97951551 + L1M3 LINE L1 3979 4137 -2003 3 1109 294 348 34 3 chrX 68698806 68698934 -97951362 + PB1D10 SINE Alu 1 131 -16 3 1109 255 295 108 8 chrX 68698997 68699127 -97951169 + MLT1D LTR MaLR 334 476 -29 3 1109 331 320 20 121 chrX 68699253 68699452 -97950844 + MTEa LTR MaLR 1 179 -200 3 1109 522 235 83 56 chrX 68699552 68699732 -97950564 + L1MD2 LINE L1 5918 6102 -257 3 1109 281 303 64 0 chrX 68699884 68699993 -97950303 + PB1D10 SINE Alu 2 117 0 3 1109 654 220 0 41 chrX 68700199 68700346 -97949950 + B1_Mur1 SINE Alu 9 149 0 3 1109 258 324 14 143 chrX 68700512 68700614 -97949682 + Charlie1 DNA MER1_type 1845 1920 -861 3 1109 387 291 175 22 chrX 68700614 68700797 -97949499 - B3 SINE B2 -5 211 1 3 1109 258 324 14 143 chrX 68700797 68700903 -97949393 + Charlie1 DNA MER1_type 1921 2026 -755 3 1109 530 297 0 26 chrX 68700943 68701095 -97949201 - B1F2 SINE Alu -1 148 1 3 1109 1100 278 62 148 chrX 68701098 68701408 -97948888 + Charlie1 DNA MER1_type 2025 2336 -445 3 1109 2901 159 12 14 chrX 68701408 68701913 -97948383 + Lx4B LINE L1 6550 7053 -5 3 1109 1100 278 62 148 chrX 68701913 68702087 -97948209 + Charlie1 DNA MER1_type 2337 2452 -329 3 1109 1206 61 0 0 chrX 68702087 68702234 -97948062 + B1_Mus2 SINE Alu 1 147 0 3 1109 1100 278 62 148 chrX 68702234 68702257 -97948039 + Charlie1 DNA MER1_type 2453 2462 -319 3 1109 531 188 0 202 chrX 68702257 68702430 -97947866 + B1_Mur1 SINE Alu 1 138 -11 3 1109 1100 278 62 148 chrX 68702430 68702697 -97947599 + Charlie1 DNA MER1_type 2463 2734 -47 3 1109 324 203 0 48 chrX 68703387 68703470 -97946826 + B1_Mur3 SINE Alu 71 149 0 3 1109 210 37 0 0 chrX 68703477 68703504 -97946792 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1109 213 333 0 0 chrX 68703945 68704005 -97946291 - BC1_Mm scRNA scRNA -82 70 11 3 1109 21 0 0 0 chrX 68704007 68704028 -97946268 + AT_rich Low_complexity Low_complexity 1 21 0 3 1109 1505 59 0 5 chrX 68704030 68704217 -97946079 - B2_Mm2 SINE B2 -9 186 1 3 1109 1009 280 221 21 chrX 68704249 68705001 -97945295 + L1M2 LINE L1 2270 3171 -2972 3 1109 389 353 19 19 chrX 68705008 68705167 -97945129 + B4A SINE B4 3 161 -131 3 1109 287 253 0 39 chrX 68705183 68705261 -97945035 - ID_B1 SINE B4 -16 208 134 3 1109 509 230 32 19 chrX 68705261 68705416 -97944880 + L1M2 LINE L1 3237 3393 -2750 3 1109 670 219 11 63 chrX 68705443 68705618 -97944678 - B3 SINE B2 -13 203 38 3 1109 246 206 16 0 chrX 68705698 68705761 -97944535 + L1M2 LINE L1 3751 3814 -2329 3 1109 262 343 97 17 chrX 68705914 68706151 -97944145 + L1MC LINE L1 5596 5851 -2031 3 1109 459 73 0 0 chrX 68706292 68706360 -97943936 + (TTTC)n Simple_repeat Simple_repeat 2 69 0 3 1109 245 359 0 0 chrX 68706741 68706819 -97943477 + ID4 SINE ID 3 80 -3 3 1109 351 0 0 0 chrX 68707933 68707972 -97942324 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1109 605 235 13 31 chrX 68708334 68708511 -97941785 + B3 SINE B2 14 181 -14 3 1109 834 17 246 8 chrX 68708511 68708629 -97941667 - B1_Mus2 SINE Alu 0 147 2 3 1109 39 0 0 0 chrX 68708629 68708668 -97941628 + AT_rich Low_complexity Low_complexity 1 39 0 3 1109 1206 263 25 8 chrX 68708743 68709040 -97941256 + B4 SINE B4 8 292 0 3 1109 529 264 74 30 chrX 68710062 68710265 -97940031 + L1MB5 LINE L1 5954 6165 -9 3 1109 659 250 87 72 chrX 68710379 68710478 -97939818 + B3 SINE B2 1 96 -120 3 1109 1658 21 16 0 chrX 68710478 68710668 -97939628 + B2_Mm1a SINE B2 1 193 0 3 1109 659 250 87 72 chrX 68710668 68710775 -97939521 + B3 SINE B2 97 210 -6 3 1109 762 236 100 29 chrX 68711226 68711466 -97938830 + B4A SINE B4 36 292 0 3 1109 296 320 8 23 chrX 68711531 68711659 -97938637 + MIR SINE MIR 118 243 -19 3 1109 240 111 0 0 chrX 68711826 68711871 -97938425 + (TTTG)n Simple_repeat Simple_repeat 4 48 0 3 1109 1182 55 0 0 chrX 68711871 68712017 -97938279 - B1_Mus2 SINE Alu 0 147 2 3 1109 291 282 189 9 chrX 68712304 68712415 -97937881 + B4 SINE B4 148 278 -14 3 1109 846 226 33 14 chrX 68712917 68713132 -97937164 - L1M4 LINE L1 -1378 4768 4550 3 1109 380 311 15 62 chrX 68713921 68714181 -97936115 + L1MB2 LINE L1 5842 6089 -82 3 1109 715 208 86 48 chrX 68714193 68714380 -97935916 + B3A SINE B2 3 196 -2 3 1109 549 289 0 26 chrX 68715352 68715490 -97934806 + B1F SINE Alu 1 138 -11 3 1109 1393 28 11 6 chrX 68715490 68715668 -97934628 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 3 1109 549 289 0 26 chrX 68715668 68715682 -97934614 + B1F SINE Alu 139 149 0 3 1109 639 0 0 0 chrX 68715725 68715796 -97934500 + (GGAA)n Simple_repeat Simple_repeat 2 72 0 3 1109 195 42 0 0 chrX 68716301 68716325 -97933971 + (CAGCT)n Simple_repeat Simple_repeat 4 27 0 3 1109 1115 72 0 0 chrX 68716453 68716592 -97933704 - B1_Mus1 SINE Alu -9 139 1 3 1109 561 280 0 8 chrX 68717094 68717227 -97933069 + B1F SINE Alu 18 149 0 3 1109 301 321 24 0 chrX 68717283 68717367 -97932929 + PB1D10 SINE Alu 6 91 -26 3 1109 201 160 39 26 chrX 68717414 68717491 -97932805 + (CAGAGA)n Simple_repeat Simple_repeat 6 83 0 3 1109 693 285 20 10 chrX 68718391 68718593 -97931703 + ID_B1 SINE B4 1 204 -20 3 1109 216 0 0 0 chrX 68718598 68718622 -97931674 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 1109 414 217 88 62 chrX 68719240 68719353 -97930943 + ORR1D1 LTR MaLR 289 404 -3 3 1109 700 231 182 5 chrX 68719385 68719606 -97930690 + Lx2B LINE L1 6768 6996 -54 3 1109 213 254 18 0 chrX 68719732 68719787 -97930509 - ID4 SINE ID -26 57 2 3 1109 245 155 155 0 chrX 68719801 68719872 -97930424 - Lx9 LINE L1 0 7644 7563 3 1109 378 0 0 0 chrX 68721169 68721211 -97929085 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1109 667 270 20 0 chrX 68721215 68721363 -97928933 - B3A SINE B2 -38 160 10 3 1109 383 207 139 9 chrX 68721352 68721466 -97928830 + MLT1B LTR MaLR 68 196 -271 3 1109 344 282 0 181 chrX 68721472 68721632 -97928664 + B1_Mur1 SINE Alu 13 143 -6 3 1109 262 272 0 36 chrX 68721935 68722019 -97928277 + RMER15 LTR ERVL 289 369 -206 3 1109 565 285 104 56 chrX 68722082 68722350 -97927946 - B4 SINE B4 -11 281 1 3 1109 233 191 0 73 chrX 68722350 68722418 -97927878 + RMER15 LTR ERVL 362 424 -151 3 1109 1882 138 55 57 chrX 68722440 68722752 -97927544 + Lx9 LINE L1 7260 7572 -72 3 1109 662 251 76 11 chrX 68722752 68722937 -97927359 - B3A SINE B2 0 198 2 3 1109 1882 138 55 57 chrX 68722937 68723008 -97927288 + Lx9 LINE L1 7573 7642 -2 3 1109 339 260 31 20 chrX 68723957 68724055 -97926241 + PB1D10 SINE Alu 14 112 -5 3 1109 255 308 63 55 chrX 68724162 68724289 -97926007 - MLT1B LTR MaLR -39 351 224 3 1109 345 306 31 0 chrX 68724396 68724494 -97925802 + RSINE1 SINE B4 44 144 -21 3 1109 390 21 0 0 chrX 68724510 68724557 -97925739 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 1109 516 184 196 28 chrX 68724557 68724580 -97925716 + ORR1D2 LTR MaLR 166 187 -187 3 1109 270 0 0 0 chrX 68724580 68724610 -97925686 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1109 526 160 213 2 chrX 68724610 68724765 -97925531 + ORR1D2 LTR MaLR 188 373 -1 3 1109 1070 66 0 0 chrX 68724862 68724998 -97925298 + B1_Mus1 SINE Alu 1 136 -12 4 1109 687 25 0 0 chrX 68724998 68725079 -97925217 + (GAAAA)n Simple_repeat Simple_repeat 2 82 0 4 1109 405 0 0 0 chrX 68725083 68725128 -97925168 + (GGGA)n Simple_repeat Simple_repeat 2 46 0 4 1109 567 0 0 0 chrX 68725128 68725190 -97925106 + (GAAA)n Simple_repeat Simple_repeat 1 63 0 4 1109 979 120 0 0 chrX 68725265 68725415 -97924881 + ORR1A3 LTR MaLR 107 256 -70 4 1109 1311 75 11 5 chrX 68725604 68725793 -97924503 - L1_Mus3 LINE L1 0 6638 6449 4 1109 2204 88 3 25 chrX 68725800 68726125 -97924171 - L1_Mus2 LINE L1 0 6566 6249 4 1109 189 147 0 0 chrX 68726175 68726209 -97924087 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1109 2171 150 3 0 chrX 68726466 68726792 -97923504 + ORR1A2 LTR MaLR 1 327 0 4 1109 212 268 110 27 chrX 68726803 68726876 -97923420 + ID2 SINE ID 5 83 0 4 1109 1306 87 33 0 chrX 68727156 68727340 -97922956 + B2_Mm1a SINE B2 1 190 -3 4 1109 344 57 57 0 chrX 68727944 68727997 -97922299 + (TCTCCC)n Simple_repeat Simple_repeat 6 61 0 4 1109 231 36 0 0 chrX 68728385 68728413 -97921883 + (CCCCCA)n Simple_repeat Simple_repeat 1 28 0 4 1109 237 217 0 0 chrX 68729613 68729659 -97920637 + L1M5 LINE L1 5529 5574 -590 4 1109 2454 74 0 6 chrX 68729706 68730034 -97920262 - L1_Mus3 LINE L1 0 6638 6313 4 1109 313 298 8 47 chrX 68730338 68730465 -97919831 + GA-rich Low_complexity Low_complexity 5 126 0 4 1109 1001 62 0 152 chrX 68730860 68731031 -97919265 - B1_Mm SINE Alu -1 146 2 4 1109 276 300 82 0 chrX 68731032 68731142 -97919154 - MTEb LTR MaLR -5 374 256 4 1109 743 301 41 0 chrX 68731477 68731696 -97918600 + B4A SINE B4 2 229 -63 4 1109 759 239 48 19 chrX 68731699 68731908 -97918388 + B3 SINE B2 2 216 0 4 1109 891 311 80 32 chrX 68733024 68733522 -97916774 - L1MD2 LINE L1 -27 6332 5811 4 1109 411 201 0 0 chrX 68734022 68734171 -97916125 + CT-rich Low_complexity Low_complexity 2 150 0 4 1109 911 122 0 11 chrX 68734176 68734358 -97915938 + (TC)n Simple_repeat Simple_repeat 1 180 0 4 1109 334 247 34 0 chrX 68734748 68734837 -97915459 - B3A SINE B2 -65 133 42 4 1109 338 42 21 0 chrX 68734847 68734895 -97915401 + (CAAAAA)n Simple_repeat Simple_repeat 3 51 0 4 1109 579 15 0 0 chrX 68735105 68735173 -97915123 + (GGAA)n Simple_repeat Simple_repeat 4 71 0 4 1109 560 252 105 10 chrX 68735526 68735726 -97914570 + ID_B1 SINE B4 4 222 -2 4 1109 553 270 63 0 chrX 68735735 68735861 -97914435 + B3A SINE B2 3 136 -62 4 1109 483 221 169 0 chrX 68735877 68736013 -97914283 + RSINE1 SINE B4 3 161 -4 4 1109 458 168 178 0 chrX 68736047 68736154 -97914142 + B1_Mur4 SINE Alu 23 148 -2 4 1109 657 196 72 0 chrX 68736161 68736299 -97913997 + B1_Mur4 SINE Alu 3 150 0 4 1109 447 320 76 47 chrX 68736349 68736585 -97913711 + B4A SINE B4 50 292 0 4 1109 769 253 62 21 chrX 68736651 68736893 -97913403 + Lx8 LINE L1 7222 7473 0 4 1109 243 0 0 0 chrX 68737248 68737275 -97913021 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1109 455 0 18 0 chrX 68737284 68737339 -97912957 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1109 282 116 0 0 chrX 68737586 68737629 -97912667 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 4 1109 239 278 56 0 chrX 68737988 68738096 -97912200 - Charlie1a DNA MER1_type -9 1446 1333 4 1109 3544 25 2 0 chrX 68738134 68738529 -97911767 + MTA_Mm LTR MaLR 1 396 0 4 1109 184 30 0 57 chrX 68738583 68738618 -97911678 + (CAA)n Simple_repeat Simple_repeat 2 34 0 4 1109 393 227 21 0 chrX 68738855 68738952 -97911344 + PB1D9 SINE Alu 22 120 0 4 1109 298 270 59 34 chrX 68739096 68739215 -97911081 + MER20 DNA MER1_type 41 162 -57 4 1109 290 354 24 35 chrX 68739858 68740028 -97910268 + MLT1G LTR MaLR 6 173 -418 4 1109 344 295 137 0 chrX 68740037 68740132 -97910164 - ID_B1 SINE B4 -34 190 83 4 1109 569 120 0 0 chrX 68740465 68740557 -97909739 - URR1B DNA MER1_type 0 225 134 4 1109 337 243 92 18 chrX 68740948 68741057 -97909239 - B1F2 SINE Alu -31 118 2 4 1109 574 207 36 0 chrX 68741120 68741231 -97909065 - B1F SINE Alu -34 115 1 4 1109 356 300 0 0 chrX 68741268 68741348 -97908948 - ID4_ SINE ID 0 83 4 4 1109 444 245 117 31 chrX 68741369 68741592 -97908704 - L1MB7 LINE L1 -23 6161 5920 4 1109 272 324 0 29 chrX 68741694 68741799 -97908497 - MIRb SINE MIR -40 228 127 4 1109 390 276 29 15 chrX 68742178 68742314 -97907982 - L1MA4 LINE L1 -373 5927 5790 4 1109 607 234 33 46 chrX 68742318 68742470 -97907826 + RSINE1 SINE B4 15 164 -1 4 1109 264 111 0 0 chrX 68742473 68742518 -97907778 + (TAA)n Simple_repeat Simple_repeat 2 46 0 4 1109 1004 249 214 16 chrX 68742530 68742918 -97907378 - L1_Mur3 LINE L1 -114 5766 5302 4 1109 432 37 0 0 chrX 68743136 68743190 -97907106 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1109 185 253 103 39 chrX 68743669 68743747 -97906549 + MIRb SINE MIR 125 207 -61 4 1109 285 269 0 0 chrX 68743749 68743816 -97906480 + ID_B1 SINE B4 87 153 -71 4 1109 391 239 25 74 chrX 68743812 68743934 -97906362 + ID_B1 SINE B4 107 222 -2 4 1109 211 267 33 0 chrX 68744156 68744216 -97906080 + MIRb SINE MIR 37 98 -170 4 1109 239 303 15 0 chrX 68744368 68744434 -97905862 + Tigger7 DNA MER2_type 2425 2491 0 4 1109 439 181 99 106 chrX 68744947 68745108 -97905188 - MER5A1 DNA MER1_type -3 163 4 4 1109 195 42 0 0 chrX 68745575 68745599 -97904697 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 4 1109 207 0 0 0 chrX 68746880 68746903 -97903393 + (CA)n Simple_repeat Simple_repeat 1 23 0 4 1109 242 244 24 12 chrX 68746903 68746986 -97903310 + CT-rich Low_complexity Low_complexity 2 85 0 4 1109 180 0 0 0 chrX 68747060 68747080 -97903216 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1109 269 322 0 0 chrX 68748426 68748521 -97901775 + B1F SINE Alu 10 104 -16 4 1109 1254 18 18 14 chrX 68748627 68748912 -97901384 + (CA)n Simple_repeat Simple_repeat 1 285 0 4 1109 228 86 0 0 chrX 68749786 68749821 -97900475 + (A)n Simple_repeat Simple_repeat 1 35 0 4 1109 378 0 0 0 chrX 68750079 68750121 -97900175 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1109 183 225 37 12 chrX 68750174 68750255 -97900041 + GA-rich Low_complexity Low_complexity 1 83 0 4 1109 318 194 5 0 chrX 68750263 68750328 -97899968 - tRNA-Ala-GCA tRNA tRNA -4 71 5 4 1109 314 162 29 0 chrX 68751439 68751507 -97898789 + CT-rich Low_complexity Low_complexity 3 72 0 4 1109 595 308 127 12 chrX 68752003 68752256 -97898040 + B4A SINE B4 10 291 -1 4 1109 239 158 0 0 chrX 68752460 68752498 -97897798 + ID SINE ID 24 61 -163 4 1109 333 0 0 0 chrX 68752499 68752536 -97897760 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 1109 355 300 0 26 chrX 68752713 68752826 -97897470 + B1_Mm SINE Alu 31 140 -7 4 1109 372 302 119 57 chrX 68752979 68753172 -97897124 + B4A SINE B4 88 292 0 4 1109 507 224 13 45 chrX 68753310 68753464 -97896832 - L1MB5 LINE L1 -88 6086 5938 4 1109 691 183 0 0 chrX 68753496 68753611 -97896685 - B1_Mus2 SINE Alu -21 126 12 4 1109 376 210 59 20 chrX 68753734 68753836 -97896460 - MLT1A1 LTR MaLR 0 408 303 4 1109 387 41 0 0 chrX 68753896 68753945 -97896351 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1109 413 302 0 0 chrX 68753953 68754049 -97896247 - ID_B1 SINE B4 -38 186 91 4 1109 1663 232 22 14 chrX 68754049 68754416 -97895880 - MTEa LTR MaLR -5 374 5 4 1109 407 253 165 16 chrX 68754573 68754797 -97895499 - L1MB5 LINE L1 -361 5823 5565 4 1109 258 337 0 10 chrX 68755309 68755408 -97894888 + MIR3 SINE MIR 79 176 -32 4 1109 1689 221 47 8 chrX 68755789 68756173 -97894123 - MTD LTR MaLR 0 419 21 4 1109 332 22 22 0 chrX 68756183 68756228 -97894068 + (CAAAAA)n Simple_repeat Simple_repeat 6 51 0 4 1109 213 121 0 0 chrX 68756282 68756315 -97893981 + (T)n Simple_repeat Simple_repeat 1 33 0 4 1109 210 71 0 0 chrX 68756427 68756455 -97893841 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1109 410 216 29 19 chrX 68756465 68756569 -97893727 - MT2A LTR ERVL -428 105 1 4 1109 317 261 16 21 chrX 68756653 68756779 -97893517 - MLT1D LTR MaLR -3 502 358 4 1109 828 118 0 0 chrX 68757065 68757192 -97893104 + (TA)n Simple_repeat Simple_repeat 1 127 0 4 1109 282 56 0 0 chrX 68757204 68757240 -97893056 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 1109 624 96 21 0 chrX 68757245 68757339 -97892957 + BGLII LTR ERVK 326 421 0 4 1109 342 269 39 0 chrX 68757650 68757754 -97892542 + L1MB4 LINE L1 6073 6180 0 4 1109 215 214 0 0 chrX 68757774 68757816 -97892480 + RSINE1 SINE B4 2 43 -122 4 1109 1728 131 51 7 chrX 68757820 68758113 -97892183 - MTC LTR MaLR -8 413 108 4 1109 1056 43 7 0 chrX 68758160 68758301 -97891995 + B1_Mm SINE Alu 6 147 0 4 1109 1035 260 80 3 chrX 68758308 68758659 -97891637 + Lx5 LINE L1 5971 6363 -687 4 1109 1252 253 97 56 chrX 68758656 68759049 -97891247 + Lx5 LINE L1 6479 6887 -163 4 1109 1577 99 0 9 chrX 68759049 68759274 -97891022 - Lx2 LINE L1 0 6997 6775 4 1109 7255 110 10 1 chrX 68759272 68760571 -97889725 - Lx2 LINE L1 -352 6645 5338 4 1109 6713 81 25 7 chrX 68760569 68762294 -97888002 - L1VL4 LINE L1 -1795 1764 7 4 1109 558 0 0 0 chrX 68762297 68762359 -97887937 + (TTTC)n Simple_repeat Simple_repeat 4 65 0 5 1109 541 43 0 0 chrX 68762360 68762430 -97887866 - B1_Mus2 SINE Alu -13 134 65 5 1109 589 234 60 6 chrX 68762432 68762600 -97887696 + Lx6 LINE L1 7256 7432 -28 5 1109 674 192 0 0 chrX 68762605 68762725 -97887571 - MTC LTR MaLR -301 120 1 5 1109 379 302 9 28 chrX 68762729 68762838 -97887458 + RSINE1 SINE B4 42 148 -17 4 1109 862 178 0 0 chrX 68762886 68763032 -97887264 + B1_Mus1 SINE Alu 1 146 -2 5 1109 324 0 0 0 chrX 68763033 68763069 -97887227 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 5 1109 615 335 17 0 chrX 68763088 68763267 -97887029 + B4A SINE B4 48 229 -63 5 1109 380 167 0 0 chrX 68763294 68763360 -97886936 + MTE2a LTR MaLR 310 375 -4 5 1109 255 229 109 84 chrX 68764194 68764313 -97885983 + L1MB7 LINE L1 5660 5781 -397 5 1109 1149 48 0 20 chrX 68764319 68764468 -97885828 + B1_Mm SINE Alu 2 147 0 5 1109 662 241 37 6 chrX 68764509 68764672 -97885624 + L1MB7 LINE L1 5769 5936 -248 5 1109 653 268 65 0 chrX 68764695 68764848 -97885448 + B3 SINE B2 30 192 -24 5 1109 600 306 46 0 chrX 68764886 68765102 -97885194 - L1MB3 LINE L1 -132 6051 5826 5 1109 721 228 7 0 chrX 68765158 68765303 -97884993 + B1_Mus1 SINE Alu 2 147 -1 5 1109 396 278 90 28 chrX 68765836 68766047 -97884249 - MLT1D LTR MaLR -260 245 22 5 1109 617 164 10 0 chrX 68766583 68766687 -97883609 + B1_Mur3 SINE Alu 34 138 -11 5 1109 819 31 0 0 chrX 68766687 68766785 -97883511 + (GGA)n Simple_repeat Simple_repeat 3 100 0 5 1109 626 195 208 0 chrX 68766805 68766964 -97883332 + B3 SINE B2 6 197 -19 5 1109 818 279 24 24 chrX 68766988 68767238 -97883058 + B4A SINE B4 1 250 -42 5 1109 449 232 221 47 chrX 68767213 68767385 -97882911 + B4A SINE B4 84 285 -7 5 1109 232 296 0 0 chrX 68767381 68767452 -97882844 + MLT1D LTR MaLR 374 444 -61 5 1109 1193 68 0 0 chrX 68767452 68767599 -97882697 + B1_Mus2 SINE Alu 1 147 0 5 1109 561 138 0 0 chrX 68767599 68767693 -97882603 + (A)n Simple_repeat Simple_repeat 1 94 0 5 1109 2800 40 0 0 chrX 68767713 68768039 -97882257 - L1Md_F2 LINE L1 -667 5915 5590 5 1109 204 40 0 0 chrX 68768490 68768515 -97881781 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 5 1109 303 352 9 9 chrX 68768637 68768746 -97881550 + PB1D10 SINE Alu 1 109 -8 5 1109 646 315 28 59 chrX 68769292 68769646 -97880650 - MLT1C LTR MaLR -124 343 1 5 1109 1788 120 92 20 chrX 68769916 68770039 -97880257 - ORR1A2 LTR MaLR 0 327 206 5 1109 3453 73 51 2 chrX 68770039 68770492 -97879804 + MT2C_Mm LTR ERVL 1 475 0 5 1109 1788 120 92 20 chrX 68770492 68770673 -97879623 - ORR1A2 LTR MaLR -122 205 1 5 1109 7061 146 26 71 chrX 68770673 68772274 -97878022 - ORR1A2-int LTR MaLR 0 1963 450 5 1109 267 306 153 53 chrX 68772445 68772766 -97877530 + L1MB8 LINE L1 5710 6062 -116 5 1109 302 275 24 24 chrX 68772777 68772859 -97877437 + BC1_Mm scRNA scRNA 1 82 -70 5 1109 1199 55 7 0 chrX 68773040 68773186 -97877110 + B1_Mus2 SINE Alu 1 147 0 5 1109 289 58 19 19 chrX 68773189 68773242 -97877054 + (CAAAA)n Simple_repeat Simple_repeat 1 53 0 5 1109 335 273 36 9 chrX 68773479 68773590 -97876706 + L1MB8 LINE L1 6059 6172 -6 5 1109 575 284 70 28 chrX 68773595 68773809 -97876487 + ID_B1 SINE B4 1 223 -1 5 1109 266 237 0 13 chrX 68773812 68773889 -97876407 + GA-rich Low_complexity Low_complexity 4 79 0 5 1109 1244 84 0 6 chrX 68773890 68774070 -97876226 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 5 1109 441 268 24 31 chrX 68774076 68774203 -97876093 + RSINE1 SINE B4 4 129 -36 5 1109 216 0 0 0 chrX 68774224 68774248 -97876048 + (TC)n Simple_repeat Simple_repeat 1 24 0 5 1109 510 61 0 0 chrX 68774248 68774313 -97875983 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 1109 679 275 33 14 chrX 68774356 68774566 -97875730 - MLT1D LTR MaLR -291 214 1 5 1109 300 321 98 47 chrX 68774921 68775114 -97875182 - L3b LINE CR1 -202 280 78 5 1109 369 0 0 0 chrX 68775280 68775321 -97874975 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 5 1109 1203 68 0 0 chrX 68775547 68775694 -97874602 + B1_Mm SINE Alu 1 147 0 5 1109 591 15 0 0 chrX 68775707 68775775 -97874521 + (GAAAA)n Simple_repeat Simple_repeat 4 71 0 5 1109 457 242 0 0 chrX 68775775 68775870 -97874426 - B3A SINE B2 -103 95 1 5 1109 246 136 0 0 chrX 68775880 68775924 -97874372 + (T)n Simple_repeat Simple_repeat 1 44 0 5 1109 1264 41 0 0 chrX 68775925 68776072 -97874224 - B1_Mus2 SINE Alu 0 147 1 5 1109 232 220 0 0 chrX 68776074 68776124 -97874172 - L1M4 LINE L1 -1321 4825 4776 5 1109 324 336 0 17 chrX 68776143 68776261 -97874035 - B1F1 SINE Alu 0 149 34 5 1109 1274 23 23 0 chrX 68776447 68776621 -97873675 + (CTGGGG)n Simple_repeat Simple_repeat 3 180 0 5 1109 434 191 88 53 chrX 68776863 68777034 -97873262 + L1M4 LINE L1 4984 5160 -986 5 1109 424 276 60 0 chrX 68777040 68777156 -97873140 + PB1 SINE Alu 3 125 -2 5 1109 326 369 18 0 chrX 68777250 68777361 -97872935 + B1F2 SINE Alu 1 113 -36 5 1109 2166 209 42 4 chrX 68777480 68777961 -97872335 + L1_Mur3 LINE L1 5356 5854 -26 5 1109 500 237 396 78 chrX 68778008 68778225 -97872071 - ORR1D2 LTR MaLR 0 370 85 5 1109 1018 135 12 12 chrX 68778247 68778412 -97871884 + URR1A DNA MER1_type 62 226 0 5 1109 506 211 73 66 chrX 68779379 68779516 -97870780 + B1F SINE Alu 1 138 -11 5 1109 1405 268 53 38 chrX 68779529 68779924 -97870372 + MTD LTR MaLR 5 405 -14 5 1109 301 217 162 39 chrX 68779957 68780140 -97870156 + L1M3 LINE L1 4822 5033 -1113 5 1109 1132 47 23 6 chrX 68780292 68780465 -97869831 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 5 1109 558 279 48 64 chrX 68781439 68781734 -97868562 + L1MB7 LINE L1 5895 6184 0 5 1109 358 221 26 0 chrX 68782447 68782524 -97867772 - ID4 SINE ID 0 83 5 5 1109 281 136 23 0 chrX 68783282 68783326 -97866970 - BC1_Mm scRNA scRNA -94 58 14 5 1109 783 266 81 115 chrX 68783323 68783453 -97866843 + ORR1D2 LTR MaLR 59 175 -195 5 1109 505 67 22 22 chrX 68783453 68783544 -97866752 + (TCTCTG)n Simple_repeat Simple_repeat 6 96 0 5 1109 783 266 81 115 chrX 68783544 68783736 -97866560 + ORR1D2 LTR MaLR 176 370 0 5 1109 2204 122 44 22 chrX 68783737 68784035 -97866261 + ORR1C1 LTR MaLR 1 312 -66 5 1109 690 13 0 0 chrX 68784035 68784114 -97866182 + (TTTC)n Simple_repeat Simple_repeat 3 81 0 5 1109 2204 122 44 22 chrX 68784114 68784177 -97866119 + ORR1C1 LTR MaLR 313 370 -8 5 1109 225 0 0 0 chrX 68784333 68784358 -97865938 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1109 898 46 126 37 chrX 68784358 68784493 -97865803 - B1_Mus1 SINE Alu 0 148 2 5 1109 248 359 60 33 chrX 68784702 68784746 -97865550 - LTR45 LTR ERV1 -16 509 465 5 1109 243 0 0 0 chrX 68784746 68784773 -97865523 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 5 1109 248 359 60 33 chrX 68784773 68784878 -97865418 - LTR45 LTR ERV1 -61 464 356 5 1109 305 321 145 19 chrX 68785470 68785629 -97864667 - ID_B1 SINE B4 -9 215 37 5 1109 581 275 122 32 chrX 68785749 68785937 -97864359 - ID_B1 SINE B4 0 224 20 5 1109 1517 199 111 6 chrX 68785950 68786283 -97864013 + ORR1D2 LTR MaLR 3 370 0 5 1109 415 277 29 10 chrX 68786301 68786403 -97863893 - B3 SINE B2 0 216 113 5 1109 214 213 43 0 chrX 68786382 68786429 -97863867 - B2_Mm2 SINE B2 -146 49 1 5 1109 1190 44 0 0 chrX 68787042 68787179 -97863117 - B1_Mus2 SINE Alu -10 137 1 5 1109 1183 285 42 106 chrX 68787529 68787551 -97862745 - MT2A LTR ERVL 0 533 518 5 1109 1156 125 3 243 chrX 68787551 68787734 -97862562 - URR1B DNA MER1_type 0 225 101 5 1109 1167 36 0 7 chrX 68787734 68787873 -97862423 - B1_Mm SINE Alu -5 142 5 5 1109 1156 125 3 243 chrX 68787873 68787985 -97862311 - URR1B DNA MER1_type -125 100 1 5 1109 1183 285 42 106 chrX 68787985 68788216 -97862080 - MT2A LTR ERVL -16 517 278 5 1109 1524 63 21 0 chrX 68788216 68788405 -97861891 + B2_Mm1t SINE B2 1 193 0 5 1109 1183 285 42 106 chrX 68788405 68788699 -97861597 - MT2A LTR ERVL -256 277 20 5 1109 419 346 37 0 chrX 68788578 68788714 -97861582 - MTEb LTR MaLR -238 141 1 5 1109 181 294 128 0 chrX 68789288 68789390 -97860906 + L2 LINE L2 1840 1954 -1465 5 1109 183 114 0 0 chrX 68789695 68789730 -97860566 + (TTG)n Simple_repeat Simple_repeat 2 36 0 5 1109 270 102 0 0 chrX 68789742 68789769 -97860527 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1109 1200 68 0 0 chrX 68789769 68789916 -97860380 - B1_Mus2 SINE Alu 0 147 1 5 1109 270 102 0 0 chrX 68789916 68789937 -97860359 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1109 606 271 242 39 chrX 68790208 68790621 -97859675 - MLT1D LTR MaLR -9 496 1 5 1109 383 202 9 0 chrX 68791484 68791593 -97858703 + (CCA)n Simple_repeat Simple_repeat 2 111 0 5 1109 547 270 138 15 chrX 68792032 68792235 -97858061 - RMER15 LTR ERVL -24 551 324 5 1109 519 277 12 6 chrX 68792561 68792728 -97857568 - L1MB4 LINE L1 -9 6171 6004 5 1109 370 250 0 107 chrX 68792783 68792895 -97857401 - RSINE1 SINE B4 -64 101 2 5 1109 3329 83 7 5 chrX 68792912 68793360 -97856936 - L1_Mus3 LINE L1 -6 6632 6184 5 1109 499 240 0 10 chrX 68793364 68793465 -97856831 - B1F1 SINE Alu -31 118 19 5 1109 319 333 48 16 chrX 68793373 68793498 -97856798 - B4 SINE B4 -94 198 70 5 1109 201 191 24 0 chrX 68794259 68794301 -97855995 + (TGAA)n Simple_repeat Simple_repeat 2 44 0 5 1109 3720 188 48 7 chrX 68794975 68795682 -97854614 - Lx5 LINE L1 0 7050 6308 5 1109 2957 148 60 12 chrX 68796619 68797119 -97853177 + RMER15 LTR ERVL 27 550 -25 5 1109 695 269 69 46 chrX 68797231 68797449 -97852847 - ID_B1 SINE B4 0 224 2 5 1109 655 274 95 29 chrX 68797728 68798143 -97852153 + L1M5 LINE L1 5154 5592 -602 5 1109 360 295 86 0 chrX 68798270 68798375 -97851921 + PB1D10 SINE Alu 1 114 -3 5 1109 584 280 43 32 chrX 68798382 68798570 -97851726 - MLT1D LTR MaLR -62 443 254 6 1109 294 259 11 36 chrX 68798771 68798866 -97851430 + ID4_ SINE ID 6 104 -48 6 1109 229 341 24 0 chrX 68798987 68799072 -97851224 + MLT1B LTR MaLR 274 360 -30 6 1109 431 273 24 24 chrX 68799079 68799203 -97851093 - MLT1D LTR MaLR -337 168 45 6 1109 1674 26 0 10 chrX 68799220 68799414 -97850882 - B2_Mm1a SINE B2 0 193 2 6 1109 277 324 98 0 chrX 68799652 68799754 -97850542 + ID_B1 SINE B4 3 114 -110 6 1109 215 197 12 205 chrX 68799726 68799809 -97850487 + B4 SINE B4 40 106 -186 6 1109 688 293 40 5 chrX 68800257 68800456 -97849840 - ID_B1 SINE B4 0 292 81 6 1109 345 239 52 17 chrX 68800552 68800667 -97849629 - B1_Mm SINE Alu -1 146 28 6 1109 260 27 0 26 chrX 68801622 68801660 -97848636 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 1109 270 0 0 0 chrX 68801660 68801690 -97848606 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1109 235 299 118 27 chrX 68801745 68801855 -97848441 - MLT1A1 LTR MaLR -12 396 277 6 1109 803 190 0 26 chrX 68802165 68802316 -97847980 - B1_Mm SINE Alu 0 147 1 6 1109 1182 49 21 0 chrX 68802476 68802620 -97847676 + B1_Mus1 SINE Alu 2 148 0 6 1109 454 209 164 82 chrX 68802739 68802947 -97847349 - MIRb SINE MIR -31 237 13 6 1109 258 292 79 53 chrX 68803502 68803654 -97846642 + MIR3 SINE MIR 44 199 -9 6 1109 396 0 0 0 chrX 68803956 68804000 -97846296 + (CAG)n Simple_repeat Simple_repeat 3 46 0 6 1109 239 276 0 0 chrX 68804230 68804288 -97846008 - RMER15 LTR ERVL -96 479 422 6 1109 3376 51 5 0 chrX 68804304 68804715 -97845581 - L1_Mus1 LINE L1 -1 6566 6154 6 1109 482 223 89 24 chrX 68804938 68805062 -97845234 - B1_Mur3 SINE Alu -16 133 2 6 1109 245 264 75 97 chrX 68805062 68805088 -97845208 - MT2B2 LTR ERVL -428 156 134 6 1109 485 271 2 25 chrX 68805215 68805362 -97844934 + ID_B1 SINE B4 104 246 -46 6 1109 306 0 0 0 chrX 68805896 68805930 -97844366 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1109 518 215 21 0 chrX 68806001 68806094 -97844202 - B1_Mm SINE Alu -51 96 2 6 1109 419 191 0 67 chrX 68806014 68806104 -97844192 - MT2B LTR ERVL -361 240 157 6 1109 375 262 18 45 chrX 68806111 68806223 -97844073 - PB1D10 SINE Alu 0 117 9 6 1109 1113 63 14 7 chrX 68806239 68806382 -97843914 - B1_Mm SINE Alu -2 145 2 6 1109 214 241 33 100 chrX 68807043 68807103 -97843193 - B1F SINE Alu -91 58 3 6 1109 306 0 0 0 chrX 68807295 68807329 -97842967 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1109 766 189 0 0 chrX 68807330 68807452 -97842844 - B1_Mur1 SINE Alu -26 123 2 6 1109 21 0 0 0 chrX 68808104 68808125 -97842171 + AT_rich Low_complexity Low_complexity 1 21 0 6 1109 23 78 0 0 chrX 68809728 68809779 -97840517 + GC_rich Low_complexity Low_complexity 1 51 0 6 1109 23 33 0 0 chrX 68809858 68809888 -97840408 + GC_rich Low_complexity Low_complexity 1 30 0 6 1109 22 92 0 20 chrX 68809936 68809998 -97840298 + GC_rich Low_complexity Low_complexity 1 61 0 6 1109 195 42 0 0 chrX 68809998 68810022 -97840274 + (CGGGG)n Simple_repeat Simple_repeat 1 24 0 6 1109 22 92 0 20 chrX 68810022 68810059 -97840237 + GC_rich Low_complexity Low_complexity 1 37 0 6 1109 205 241 0 0 chrX 68810160 68810218 -97840078 + C-rich Low_complexity Low_complexity 3 60 0 6 1110 348 148 0 0 chrX 68812911 68812972 -97837324 + (GGA)n Simple_repeat Simple_repeat 3 63 0 6 1110 319 220 69 60 chrX 68815776 68815892 -97834404 + L1M4 LINE L1 5180 5296 -850 6 1110 502 283 18 0 chrX 68815893 68816006 -97834290 + PB1D10 SINE Alu 1 115 -2 6 1110 673 297 24 47 chrX 68816084 68816117 -97834179 + B4 SINE B4 59 92 -200 6 1110 839 237 82 5 chrX 68816117 68816312 -97833984 + B3 SINE B2 1 210 -6 6 1110 673 297 24 47 chrX 68816312 68816490 -97833806 + B4 SINE B4 93 265 -27 6 1110 516 227 65 32 chrX 68816498 68816653 -97833643 - MTD LTR MaLR -2 417 258 6 1110 266 254 14 0 chrX 68816654 68816725 -97833571 + L1M4 LINE L1 5683 5754 -435 6 1110 192 40 0 0 chrX 68817652 68817677 -97832619 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 1110 441 95 0 0 chrX 68817679 68817742 -97832554 + (GA)n Simple_repeat Simple_repeat 2 64 0 6 1110 310 270 87 39 chrX 68817775 68817879 -97832417 + PB1D10 SINE Alu 1 109 -8 6 1110 2176 195 173 114 chrX 68818049 68818140 -97832156 - RMER19B LTR ERVK -106 796 739 6 1110 1183 74 0 0 chrX 68818140 68818288 -97832008 - B1_Mus1 SINE Alu 0 148 1 6 1110 2176 195 173 114 chrX 68818288 68818948 -97831348 - RMER19B LTR ERVK -164 738 1 6 1110 289 200 0 0 chrX 68818948 68819007 -97831289 - RMER15 LTR ERVL -112 463 405 6 1110 181 163 0 39 chrX 68819944 68819995 -97830301 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1110 229 349 24 12 chrX 68820026 68820110 -97830186 - B4A SINE B4 -22 270 186 6 1110 275 98 58 19 chrX 68820135 68820187 -97830109 - B4 SINE B4 -235 57 4 6 1110 218 313 11 46 chrX 68820226 68820313 -97829983 - B3A SINE B2 -16 182 99 6 1110 272 269 0 169 chrX 68820367 68820497 -97829799 + MT2B2 LTR ERVL 153 260 -324 6 1110 574 232 0 59 chrX 68820383 68820502 -97829794 + B1_Mur1 SINE Alu 1 112 -37 6 1110 289 238 2 2 chrX 68820560 68820626 -97829670 + B1F SINE Alu 47 141 -8 6 1110 266 339 25 25 chrX 68820671 68820789 -97829507 - ID_B1 SINE B4 -26 198 81 6 1110 642 308 24 0 chrX 68821120 68821387 -97828909 + L1ME3B LINE L1 5160 5432 -741 6 1110 242 305 69 21 chrX 68821698 68821842 -97828454 + L1ME3B LINE L1 5912 6062 -178 6 1110 918 258 159 29 chrX 68821861 68822201 -97828095 + MLT1B LTR MaLR 3 386 -4 6 1110 451 217 48 10 chrX 68822262 68822378 -97827918 - PB1D7 SINE Alu -13 136 12 6 1110 1652 161 170 10 chrX 68822420 68822674 -97827622 + Lx9 LINE L1 7200 7488 -156 6 1110 228 67 0 0 chrX 68822674 68822704 -97827592 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1110 1652 161 170 10 chrX 68822704 68822832 -97827464 + Lx9 LINE L1 7489 7642 -2 6 1110 1238 48 0 0 chrX 68822834 68822981 -97827315 + B1_Mm SINE Alu 1 147 0 6 1110 913 169 7 0 chrX 68823312 68823460 -97826836 + B1_Mur2 SINE Alu 1 149 0 6 1110 690 296 142 63 chrX 68823510 68823817 -97826479 - L1MB5 LINE L1 -50 6128 5813 6 1110 310 327 0 0 chrX 68823817 68823921 -97826375 - PB1D9 SINE Alu -16 104 1 6 1110 690 297 144 54 chrX 68823921 68824268 -97826028 - L1MB5 LINE L1 -362 5812 5422 6 1110 224 251 0 0 chrX 68825483 68825538 -97824758 + MIRc SINE MIR 100 158 -110 6 1110 505 248 30 0 chrX 68825541 68825642 -97824654 - B1F SINE Alu -45 104 1 6 1110 272 328 116 29 chrX 68825642 68825679 -97824617 - B4 SINE B4 -99 193 44 6 1110 829 193 21 0 chrX 68825983 68826128 -97824168 - B1_Mur2 SINE Alu 0 149 2 6 1110 815 155 42 7 chrX 68826149 68826292 -97824004 - B1_Mur2 SINE Alu -1 148 1 6 1110 314 250 0 50 chrX 68826293 68826373 -97823923 - B1F SINE Alu 0 149 74 6 1110 483 327 94 27 chrX 68826407 68826630 -97823666 + MLT1A1 LTR MaLR 62 299 -280 6 1110 307 197 153 14 chrX 68826685 68826757 -97823539 + MER77 LTR ERVL 53 134 -473 6 1110 423 0 0 0 chrX 68826842 68826889 -97823407 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1110 580 310 29 65 chrX 68826890 68827126 -97823170 + MER77 LTR ERVL 311 537 -70 6 1110 2537 80 3 27 chrX 68827126 68827461 -97822835 - ORR1A2 LTR MaLR 0 327 1 6 1110 580 310 29 65 chrX 68827461 68827531 -97822765 + MER77 LTR ERVL 538 606 -1 6 1110 435 278 0 27 chrX 68827728 68827839 -97822457 - PB1D10 SINE Alu 0 117 10 6 1110 21 0 0 0 chrX 68828049 68828070 -97822226 + AT_rich Low_complexity Low_complexity 1 21 0 6 1110 234 305 0 0 chrX 68828280 68828339 -97821957 - ID4 SINE ID -4 79 21 6 1110 1176 82 0 0 chrX 68828397 68828544 -97821752 + B1_Mm SINE Alu 1 147 0 6 1110 344 53 0 50 chrX 68828544 68828604 -97821692 + (A)n Simple_repeat Simple_repeat 1 57 0 6 1110 281 211 0 0 chrX 68829260 68829312 -97820984 + MLT2B4 LTR ERVL 1 52 -504 6 1110 202 128 0 25 chrX 68829312 68829352 -97820944 + (TCTG)n Simple_repeat Simple_repeat 1 39 0 6 1110 424 278 21 0 chrX 68829393 68829490 -97820806 - PB1 SINE Alu -19 108 10 6 1110 341 313 40 33 chrX 68829504 68829656 -97820640 - L1MC LINE L1 -2062 5820 5668 6 1110 1124 74 0 0 chrX 68829726 68829861 -97820435 + B1_Mus2 SINE Alu 2 136 -11 6 1110 189 74 0 0 chrX 68829861 68829888 -97820408 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1110 234 319 67 33 chrX 68830069 68830189 -97820107 + RLTR13B3 LTR ERVK 179 302 -627 6 1110 536 233 109 36 chrX 68830220 68830358 -97819938 + MLT1A1 LTR MaLR 261 408 0 6 1110 2334 146 56 34 chrX 68830359 68830770 -97819526 - MTC LTR MaLR 0 421 2 6 1110 1114 72 0 0 chrX 68830898 68831037 -97819259 - B1_Mus1 SINE Alu -8 140 2 6 1110 361 219 0 0 chrX 68831165 68831229 -97819067 + B3A SINE B2 91 154 -44 6 1110 230 56 0 27 chrX 68831230 68831267 -97819029 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1110 1657 37 0 0 chrX 68831294 68831483 -97818813 + B2_Mm1a SINE B2 1 189 -4 6 1110 255 266 25 25 chrX 68831930 68832011 -97818285 - L2a LINE L2 -227 3199 3119 6 1110 422 278 36 138 chrX 68832430 68832597 -97817699 - B3A SINE B2 -34 182 33 6 1110 892 288 61 81 chrX 68832617 68832961 -97817335 + MTEa LTR MaLR 43 379 0 6 1110 231 323 0 0 chrX 68833124 68833186 -97817110 - B1F1 SINE Alu -15 134 73 6 1110 540 152 24 0 chrX 68833192 68833259 -97817037 + polypyrimidine Low_complexity Low_complexity 59 128 0 6 1110 788 171 71 0 chrX 68833259 68833399 -97816897 - B1_Mur4 SINE Alu 0 150 1 6 1110 540 152 24 0 chrX 68833399 68833456 -97816840 + polypyrimidine Low_complexity Low_complexity 2 58 0 6 1110 912 153 0 7 chrX 68833456 68833601 -97816695 - B1_Mus1 SINE Alu 0 148 5 6 1110 252 220 34 0 chrX 68833693 68833752 -97816544 + (TATG)n Simple_repeat Simple_repeat 2 62 0 7 1110 2476 95 0 3 chrX 68834199 68834527 -97815769 + ORR1A2 LTR MaLR 1 327 0 7 1110 9930 121 64 12 chrX 68834527 68836362 -97813934 + ORR1A2-int LTR MaLR 1 1931 -32 7 1110 289 49 0 24 chrX 68836354 68836396 -97813900 + ORR1A2 LTR MaLR 286 326 0 7 1110 518 230 135 12 chrX 68836553 68836716 -97813580 + L1M2 LINE L1 5425 5607 -684 7 1110 1255 130 5 5 chrX 68836716 68836910 -97813386 + B2_Mm2 SINE B2 2 195 0 7 1110 263 281 41 10 chrX 68836958 68837055 -97813241 - L1M2 LINE L1 -588 5703 5604 7 1110 834 243 53 42 chrX 68837396 68837672 -97812624 - L1MCa LINE L1 -645 5724 5432 7 1110 477 0 0 0 chrX 68837672 68837725 -97812571 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1110 591 231 100 25 chrX 68837725 68837796 -97812500 - L1MCa LINE L1 -890 5431 5363 7 1110 186 227 0 0 chrX 68837798 68837842 -97812454 + CT-rich Low_complexity Low_complexity 1 44 0 7 1110 275 274 29 95 chrX 68837875 68837980 -97812316 - ID_B1 SINE B4 -33 191 94 7 1110 316 245 65 84 chrX 68838204 68838311 -97811985 + MTE-int LTR MaLR 750 854 -726 7 1110 769 145 56 28 chrX 68838313 68838455 -97811841 - B1_Mur3 SINE Alu -3 146 1 7 1110 1463 74 16 0 chrX 68838528 68838717 -97811579 - B2_Mm2 SINE B2 -3 192 1 7 1110 937 268 114 62 chrX 68838805 68839243 -97811053 - L1MCa LINE L1 -5822 686 226 7 1110 736 281 37 60 chrX 68839375 68839757 -97810539 - L1MB5 LINE L1 -154 6020 5648 7 1110 400 232 10 10 chrX 68839906 68840002 -97810294 - PB1D10 SINE Alu -5 112 17 7 1110 195 42 0 0 chrX 68840023 68840047 -97810249 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1110 1165 75 0 0 chrX 68840047 68840193 -97810103 - B1_Mus2 SINE Alu 0 147 2 7 1110 324 241 13 0 chrX 68840875 68840954 -97809342 - L1MA5 LINE L1 -28 6272 6193 7 1110 1646 112 67 0 chrX 68841034 68841299 -97808997 + ORR1A3 LTR MaLR 1 283 -43 7 1110 1031 59 0 0 chrX 68841299 68841434 -97808862 + B2_Mm2 SINE B2 2 136 -59 7 1110 360 0 0 0 chrX 68841434 68841474 -97808822 + (TA)n Simple_repeat Simple_repeat 2 41 0 7 1110 290 148 19 0 chrX 68841484 68841538 -97808758 + ORR1A3 LTR MaLR 329 383 -11 7 1110 1154 276 30 78 chrX 68841588 68841985 -97808311 - MTE2b LTR MaLR -1 378 1 7 1110 21 0 0 0 chrX 68842685 68842706 -97807590 + AT_rich Low_complexity Low_complexity 1 21 0 7 1110 1231 41 0 14 chrX 68842707 68842855 -97807441 - B1_Mus2 SINE Alu -1 146 1 7 1110 397 273 65 80 chrX 68843175 68843354 -97806942 - B3 SINE B2 0 216 40 7 1110 711 34 33 16 chrX 68843583 68843704 -97806592 + (TG)n Simple_repeat Simple_repeat 2 124 0 7 1110 547 252 17 0 chrX 68843731 68843846 -97806450 - RSINE1 SINE B4 -21 144 28 7 1110 1227 55 0 0 chrX 68843982 68844128 -97806168 + B1_Mus2 SINE Alu 2 147 0 7 1110 252 86 0 0 chrX 68844128 68844163 -97806133 + (A)n Simple_repeat Simple_repeat 1 35 0 7 1110 818 281 4 31 chrX 68844290 68844518 -97805778 + ID_B1 SINE B4 3 224 0 7 1110 200 326 74 0 chrX 68844575 68844710 -97805586 + L2b LINE L2 2718 2862 -557 7 1110 319 280 21 57 chrX 68844750 68844890 -97805406 + L2b LINE L2 3237 3371 -55 7 1110 1177 212 124 35 chrX 68844900 68845238 -97805058 + ORR1D1 LTR MaLR 3 370 -4 7 1110 391 255 41 0 chrX 68845698 68845796 -97804500 - ORR1D1 LTR MaLR -6 368 267 7 1110 1047 104 68 23 chrX 68846183 68846360 -97803936 + B2_Mm2 SINE B2 2 186 -9 7 1110 1250 34 0 7 chrX 68846597 68846745 -97803551 + B1_Mus1 SINE Alu 2 148 0 7 1110 260 65 0 42 chrX 68846746 68846794 -97803502 + (CAAAAA)n Simple_repeat Simple_repeat 1 46 0 7 1110 803 282 5 5 chrX 68846843 68847032 -97803264 - B3 SINE B2 -20 196 8 7 1110 275 312 27 20 chrX 68847732 68847879 -97802417 + L1ME4a LINE L1 5977 6124 0 7 1110 491 320 123 16 chrX 68847994 68848369 -97801927 - L1MEf LINE L1 -4523 1677 1263 7 1110 626 298 54 25 chrX 68848881 68849160 -97801136 + RMER15 LTR ERVL 275 561 -14 7 1110 716 178 197 16 chrX 68849331 68849514 -97800782 - B3 SINE B2 0 216 1 7 1110 599 332 45 29 chrX 68849533 68849618 -97800678 + Charlie21a DNA MER1_type 263 349 -864 7 1110 3345 43 2 5 chrX 68849618 68850015 -97800281 + MTA_Mm LTR MaLR 1 396 0 7 1110 599 332 45 29 chrX 68850015 68850347 -97799949 + Charlie21a DNA MER1_type 350 687 -526 7 1110 536 255 20 7 chrX 68850582 68850732 -97799564 - L1MC2 LINE L1 -88 6256 6105 7 1110 222 226 0 0 chrX 68850991 68851044 -97799252 + T-rich Low_complexity Low_complexity 1 53 0 7 1110 324 0 0 0 chrX 68851827 68851863 -97798433 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1110 230 136 23 0 chrX 68852365 68852409 -97797887 + CT-rich Low_complexity Low_complexity 4 48 0 7 1110 28 0 0 0 chrX 68854627 68854655 -97795641 + GC_rich Low_complexity Low_complexity 1 28 0 7 1110 465 376 72 33 chrX 68854985 68855376 -97794920 + FordPrefect_a DNA Tip100 50 455 -53 7 1110 379 275 122 0 chrX 68855631 68855762 -97794534 - B1_Mur2 SINE Alu -1 148 2 7 1110 795 295 153 41 chrX 68856408 68856544 -97793752 - Lx9 LINE L1 0 7473 7330 7 1110 210 118 0 0 chrX 68856544 68856578 -97793718 + (CATA)n Simple_repeat Simple_repeat 3 36 0 7 1110 926 271 91 44 chrX 68856578 68857025 -97793271 - Lx9 LINE L1 -307 7337 6827 7 1110 1050 55 14 0 chrX 68857031 68857176 -97793120 + L1_Mus2 LINE L1 6419 6565 -1 7 1110 24 0 0 0 chrX 68857176 68857200 -97793096 + AT_rich Low_complexity Low_complexity 1 24 0 7 1110 957 226 32 9 chrX 68857240 68857459 -97792837 + L1_Rod LINE L1 4678 4901 -946 7 1110 2300 82 3 0 chrX 68857459 68857777 -97792519 + ORR1A2 LTR MaLR 1 319 -8 7 1110 273 214 0 0 chrX 68857778 68857834 -97792462 + L1_Mur3 LINE L1 4920 4975 -905 7 1110 313 272 0 25 chrX 68857835 68857942 -97792354 + L1_Mur3 LINE L1 4908 5037 -1103 7 1110 329 156 0 45 chrX 68858055 68858122 -97792174 + L1_Rod LINE L1 4977 5040 -807 7 1110 246 32 0 0 chrX 68858566 68858597 -97791699 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 7 1110 423 0 0 0 chrX 68859828 68859875 -97790421 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 7 1110 7736 171 7 16 chrX 68859875 68861212 -97789084 - Lx5 LINE L1 -12 7038 5715 7 1110 7411 116 6 11 chrX 68861211 68862325 -97787971 + L1Md_F2 LINE L1 4478 5586 -297 7 1110 8217 44 3 2 chrX 68862326 68863320 -97786976 + L1Md_F2 LINE L1 5588 6582 0 7 1110 6048 63 17 4 chrX 68863342 68864119 -97786177 + L1_Mus2 LINE L1 5780 6566 0 7 1110 2946 92 10 3 chrX 68864121 68864513 -97785783 + L1_Mur2 LINE L1 5280 5674 -203 7 1110 642 257 23 23 chrX 68864537 68864712 -97785584 - B3 SINE B2 0 216 42 7 1110 6032 93 20 37 chrX 68864750 68865327 -97784969 - Lx LINE L1 -3 6651 6088 7 1110 3561 18 2 0 chrX 68865327 68865722 -97784574 - MTA_Mm LTR MaLR 0 396 1 7 1110 6032 93 20 37 chrX 68865722 68866060 -97784236 - Lx LINE L1 -567 6087 5752 7 1110 305 287 185 0 chrX 68866060 68866168 -97784128 - B1_Mur2 SINE Alu -20 129 2 7 1110 250 370 91 17 chrX 68866264 68866440 -97783856 + L2a LINE L2 2609 2797 -622 7 1110 426 342 96 14 chrX 68866500 68866782 -97783514 + L2a LINE L2 3119 3423 -3 7 1110 501 250 25 0 chrX 68866884 68867004 -97783292 - B1F1 SINE Alu 0 149 27 7 1110 187 342 44 31 chrX 68867120 68867280 -97783016 + L2 LINE L2 1855 2016 -1403 7 1110 369 233 47 0 chrX 68867317 68867403 -97782893 - PB1D7 SINE Alu -21 99 10 7 1110 749 259 35 0 chrX 68867451 68867613 -97782683 - B3 SINE B2 -9 207 40 7 1110 659 184 80 14 chrX 68867613 68867751 -97782545 + B1_Mur2 SINE Alu 1 147 -2 7 1110 234 292 124 10 chrX 68867996 68868093 -97782203 - MTEb LTR MaLR -71 308 201 7 1110 273 181 0 69 chrX 68868107 68868208 -97782088 + GA-rich Low_complexity Low_complexity 3 96 0 7 1110 241 317 24 0 chrX 68868267 68868349 -97781947 - MLT2B2 LTR ERVL -412 103 20 7 1110 1227 221 58 24 chrX 68868528 68868858 -97781438 + MTEa LTR MaLR 1 341 -38 7 1110 396 0 0 0 chrX 68869084 68869128 -97781168 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1110 10696 57 0 22 chrX 68869253 68870611 -97779685 + L1_Mm LINE L1 4258 5586 -297 7 1110 8338 42 1 3 chrX 68870611 68871608 -97778688 + L1Md_F2 LINE L1 5588 6582 0 7 1110 10696 57 0 22 chrX 68871608 68871619 -97778677 + L1_Mm LINE L1 5587 5597 -286 7 1110 293 239 30 0 chrX 68871761 68871828 -97778468 + B1_Mur3 SINE Alu 2 70 -79 7 1110 1968 187 41 5 chrX 68872003 68872396 -97777900 - MTC LTR MaLR -14 407 1 7 1110 624 210 0 0 chrX 68873689 68873808 -97776488 + B1F SINE Alu 2 120 -29 7 1110 736 85 0 84 chrX 68873973 68874115 -97776181 + L1_Mus3 LINE L1 6493 6622 -16 7 1110 880 243 59 66 chrX 68874140 68874427 -97775869 + B4 SINE B4 2 286 -6 7 1110 248 310 70 0 chrX 68874510 68874652 -97775644 - Lx8 LINE L1 -1 7472 7321 7 1110 318 312 70 18 chrX 68875163 68875277 -97775019 + B1F2 SINE Alu 1 120 -29 7 1110 721 214 29 0 chrX 68875307 68875447 -97774849 + B1_Mur4 SINE Alu 2 145 -5 7 1110 387 0 0 0 chrX 68875459 68875502 -97774794 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1110 239 173 19 0 chrX 68875504 68875556 -97774740 + GA-rich Low_complexity Low_complexity 3 55 0 7 1110 274 250 42 0 chrX 68875703 68875775 -97774521 - ID_B1 SINE B4 -23 201 127 7 1110 497 167 21 10 chrX 68879181 68879278 -97771018 + MTE2b LTR MaLR 1 98 -281 7 1110 1164 68 0 20 chrX 68879325 68879475 -97770821 - B1_Mus1 SINE Alu 0 148 2 7 1110 557 298 44 115 chrX 68879479 68879817 -97770479 + MTE2b LTR MaLR 61 374 -5 7 1110 476 288 43 94 chrX 68880033 68880267 -97770029 + LTR41B LTR ERVL 512 733 -25 7 1110 240 216 39 0 chrX 68880301 68880352 -97769944 - Tigger7 DNA MER2_type -33 2458 2406 7 1110 432 271 152 0 chrX 68880550 68880760 -97769536 - Tigger7 DNA MER2_type -118 2373 2132 7 1110 270 336 36 43 chrX 68880844 68880984 -97769312 - Tigger7 DNA MER2_type -2342 149 11 7 1110 3121 49 23 3 chrX 68881197 68881585 -97768711 + MTA_Mm LTR MaLR 1 396 0 7 1110 5469 79 14 1 chrX 68881762 68882487 -97767809 + L1_Mus4 LINE L1 5902 6635 -1 7 1110 1369 101 0 11 chrX 68882654 68882844 -97767452 - B2_Mm2 SINE B2 -7 188 1 7 1110 529 380 48 28 chrX 68883023 68883483 -97766813 + MLT1N2 LTR MaLR 94 562 0 7 1110 255 236 165 43 chrX 68883685 68883800 -97766496 + L1MA5 LINE L1 5929 6057 -243 7 1110 1072 303 57 26 chrX 68883952 68884292 -97766004 - RCHARR1 DNA MER1_type -577 397 42 8 1110 1810 190 29 22 chrX 68884292 68884706 -97765590 + MTD LTR MaLR 1 417 -2 8 1110 1072 303 57 26 chrX 68884706 68884748 -97765548 - RCHARR1 DNA MER1_type -933 41 3 8 1110 315 292 12 20 chrX 68885198 68885315 -97764981 + PB1D10 SINE Alu 10 124 -3 8 1110 210 143 0 0 chrX 68885750 68885785 -97764511 + (GA)n Simple_repeat Simple_repeat 2 36 0 8 1110 396 309 86 13 chrX 68885814 68885965 -97764331 - B3A SINE B2 -36 162 1 8 1110 446 284 28 0 chrX 68886036 68886145 -97764151 - B3 SINE B2 -103 113 2 8 1110 426 292 95 0 chrX 68886186 68886333 -97763963 - RSINE1 SINE B4 -4 161 1 8 1110 864 114 0 0 chrX 68886762 68886893 -97763403 + (TCC)n Simple_repeat Simple_repeat 3 133 0 8 1110 443 33 0 32 chrX 68886937 68886958 -97763338 + (GGA)n Simple_repeat Simple_repeat 2 22 0 8 1110 1191 112 0 0 chrX 68886958 68887137 -97763159 + (GAA)n Simple_repeat Simple_repeat 1 179 0 8 1110 443 33 0 32 chrX 68887137 68887177 -97763119 + (GGA)n Simple_repeat Simple_repeat 2 40 0 8 1110 257 336 61 14 chrX 68887603 68887751 -97762545 - L1M5 LINE L1 -697 5543 5389 8 1110 294 282 104 50 chrX 68888245 68888546 -97761750 - Lx8 LINE L1 -1215 6429 6111 8 1110 2032 234 54 35 chrX 68888623 68888927 -97761369 - Lx8 LINE L1 -7 5840 5520 8 1110 895 234 51 0 chrX 68888927 68889124 -97761172 - B3 SINE B2 -6 210 4 8 1110 2032 234 54 35 chrX 68889124 68889391 -97760905 - Lx8 LINE L1 -328 5519 5258 8 1110 1075 241 209 14 chrX 68889393 68889839 -97760457 - L1_Mur3 LINE L1 -914 4966 4434 8 1110 2023 186 46 62 chrX 68890401 68890778 -97759518 + Lx5 LINE L1 6267 6964 -86 8 1110 4356 47 6 4 chrX 68890778 68891314 -97758982 - L1Md_F3 LINE L1 -15 6569 6033 8 1110 2023 180 45 64 chrX 68891314 68891375 -97758921 + Lx5 LINE L1 6965 7025 -25 8 1110 212 298 0 0 chrX 68891376 68891460 -97758836 + T-rich Low_complexity Low_complexity 1 84 0 8 1110 8724 52 11 3 chrX 68891468 68893256 -97757040 - L1Md_F2 LINE L1 0 6582 4789 8 1110 3909 43 0 4 chrX 68893257 68893726 -97756570 - L1_Mus1 LINE L1 0 6567 6101 8 1110 6209 89 1 2 chrX 68893729 68894564 -97755732 + L1_Mm LINE L1 4822 5655 -228 8 1110 465 246 156 42 chrX 68895216 68895343 -97754953 + L1M2 LINE L1 5350 5494 -809 8 1110 1384 91 38 0 chrX 68895343 68895529 -97754767 + B2_Mm2 SINE B2 3 195 0 8 1110 465 262 108 33 chrX 68895529 68895687 -97754609 + L1M2 LINE L1 5495 5659 -653 8 1110 552 254 14 7 chrX 68895780 68895923 -97754373 + B1F1 SINE Alu 1 144 -5 8 1110 2039 61 4 0 chrX 68896004 68896265 -97754031 + L1_Mus2 LINE L1 6305 6566 0 8 1110 3782 135 46 15 chrX 68896828 68897542 -97752754 + RMER12 LTR ERVK 1 736 -586 8 1110 516 59 0 0 chrX 68897572 68897640 -97752656 + (TCCA)n Simple_repeat Simple_repeat 1 68 0 8 1110 759 271 25 53 chrX 68897659 68897904 -97752392 + RMER12 LTR ERVK 958 1195 -127 8 1110 297 75 0 0 chrX 68898241 68898281 -97752015 + (TCTCCC)n Simple_repeat Simple_repeat 4 43 0 8 1110 640 152 0 38 chrX 68898333 68898476 -97751820 + CT-rich Low_complexity Low_complexity 43 180 0 8 1110 1158 84 0 0 chrX 68898476 68898833 -97751463 + (TCC)n Simple_repeat Simple_repeat 1 357 0 8 1110 640 152 0 38 chrX 68898833 68898873 -97751423 + polypyrimidine Low_complexity Low_complexity 4 42 0 8 1110 7919 88 12 1 chrX 68899211 68900742 -97749554 - L1_Mus4 LINE L1 0 6636 5096 8 1110 230 330 0 0 chrX 68900855 68900964 -97749332 - MER2 DNA MER2_type -121 224 116 8 1110 270 0 0 0 chrX 68901538 68901568 -97748728 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 8 1110 254 301 36 12 chrX 68901943 68902027 -97748269 - MIR SINE MIR -99 109 24 8 1110 249 211 13 26 chrX 68902557 68902635 -97747661 + T-rich Low_complexity Low_complexity 3 79 0 8 1110 270 0 0 0 chrX 68902637 68902667 -97747629 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 1110 28 48 0 0 chrX 68902756 68902798 -97747498 + AT_rich Low_complexity Low_complexity 1 42 0 8 1110 724 48 29 0 chrX 68903069 68903174 -97747122 - L1Md_F2 LINE L1 -12 6570 6463 8 1110 472 57 84 14 chrX 68904546 68904688 -97745608 + (TG)n Simple_repeat Simple_repeat 1 152 0 8 1110 589 289 97 30 chrX 68904739 68905007 -97745289 - B4A SINE B4 -6 286 1 8 1110 4707 180 84 14 chrX 68905298 68906198 -97744098 + Lx6 LINE L1 6498 7460 0 8 1110 201 318 59 0 chrX 68906507 68906592 -97743704 - L2 LINE L2 -1371 2048 1959 8 1110 875 222 54 10 chrX 68907040 68907245 -97743051 + B3 SINE B2 3 216 0 8 1110 879 276 114 20 chrX 68907459 68907817 -97742479 + L1M3 LINE L1 3463 3854 -2286 8 1110 550 319 7 0 chrX 68907835 68907973 -97742323 + ID_B1 SINE B4 81 219 -5 8 1110 717 319 83 64 chrX 68908197 68908576 -97741720 + L1M5 LINE L1 4123 4532 -1614 8 1110 615 222 106 43 chrX 68908576 68908783 -97741513 + ID_B1 SINE B4 2 221 -3 8 1110 717 319 83 64 chrX 68908783 68909387 -97740909 + L1M5 LINE L1 4533 5125 -1021 8 1110 239 333 39 0 chrX 68912637 68912715 -97737581 - ID4_ SINE ID -1 82 2 8 1110 830 169 132 0 chrX 68913144 68913310 -97736986 - URR1A DNA MER1_type -38 188 1 8 1110 579 263 122 0 chrX 68913326 68913570 -97736726 + L1MB7 LINE L1 5693 5960 -214 8 1110 267 225 84 0 chrX 68913596 68913667 -97736629 + B1F1 SINE Alu 4 80 -69 8 1110 235 83 0 0 chrX 68913718 68913754 -97736542 + L1MB7 LINE L1 6134 6169 -15 8 1110 185 346 126 19 chrX 68913842 68913945 -97736351 + MIR SINE MIR 24 137 -71 8 1110 21 0 0 0 chrX 68917566 68917587 -97732709 + GC_rich Low_complexity Low_complexity 1 21 0 8 1110 558 0 0 0 chrX 68919216 68919278 -97731018 + (TCC)n Simple_repeat Simple_repeat 2 63 0 8 1110 183 42 0 0 chrX 68919448 68919472 -97730824 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 8 1110 225 0 0 0 chrX 68922738 68922763 -97727533 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 1110 413 256 174 0 chrX 68922771 68922892 -97727404 - RSINE1 SINE B4 -21 144 3 8 1110 217 267 18 85 chrX 68923753 68923874 -97726422 - PB1D10 SINE Alu -5 115 2 8 1110 420 281 75 0 chrX 68924136 68924282 -97726014 - L1MB3 LINE L1 -7 6176 6020 8 1110 250 226 102 19 chrX 68924375 68924483 -97725813 + L1MCa LINE L1 2118 2234 -4274 8 1110 355 239 107 27 chrX 68924562 68924674 -97725622 + B1F SINE Alu 20 140 -9 8 1110 1665 279 53 50 chrX 68924680 68925384 -97724912 + L1MCa LINE L1 2353 3068 -3253 8 1110 643 164 164 0 chrX 68925384 68925512 -97724784 - B1_Mur4 SINE Alu 0 150 2 8 1110 1665 279 53 49 chrX 68925512 68925667 -97724629 + L1MCa LINE L1 3069 3218 -3103 8 1110 430 305 71 52 chrX 68925840 68926051 -97724245 + MTE2b LTR MaLR 1 215 -164 8 1110 22 0 0 0 chrX 68926210 68926232 -97724064 + AT_rich Low_complexity Low_complexity 1 22 0 8 1110 412 174 270 58 chrX 68926232 68926421 -97723875 - Lx7 LINE L1 0 7696 7468 8 1110 6492 179 60 20 chrX 68926409 68926431 -97723865 - Lx7 LINE L1 -346 7350 7333 8 1110 180 0 0 0 chrX 68926431 68926451 -97723845 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 8 1110 6492 179 60 20 chrX 68926451 68927669 -97722627 - Lx7 LINE L1 -364 7332 6061 8 1110 545 261 134 16 chrX 68928520 68928707 -97721589 - B3 SINE B2 -7 209 1 8 1110 252 0 0 0 chrX 68928989 68929017 -97721279 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 8 1110 5421 99 45 37 chrX 68929017 68929884 -97720412 - Lx3B LINE L1 -7 6966 6093 8 1110 417 222 0 48 chrX 68929916 68930020 -97720276 - B1_Mur1 SINE Alu -36 113 15 8 1110 282 244 42 183 chrX 68930020 68930106 -97720190 - B4 SINE B4 -89 202 40 8 1110 264 231 62 36 chrX 68930388 68930500 -97719796 + L1MA8 LINE L1 6176 6290 -1 8 1110 31833 85 14 18 chrX 68930706 68933061 -97717235 - L1_Mus2 LINE L1 -2 6567 4203 8 1110 342 0 0 0 chrX 68933061 68933099 -97717197 + (TA)n Simple_repeat Simple_repeat 1 38 0 8 1110 31833 98 7 23 chrX 68933099 68936188 -97714108 - L1_Mus2 LINE L1 -1684 4202 1194 8 1110 1540 33 49 0 chrX 68936188 68936372 -97713924 - B2_Mm1a SINE B2 0 193 1 8 1110 2757 138 4 114 chrX 68936372 68936900 -97713396 - L1_Mus2 LINE L1 -5409 1210 728 8 1110 540 232 54 39 chrX 68936872 68937100 -97713196 - L1_Mus2 LINE L1 -5813 806 408 8 1110 411 151 30 191 chrX 68937115 68937246 -97713050 - L1VL1 LINE L1 -6065 357 248 8 1110 2014 121 15 3 chrX 68937246 68937570 -97712726 + IAPLTR1a_Mm LTR ERVK 1 328 -9 8 1110 11205 112 107 36 chrX 68937571 68939762 -97710534 + IAPEz-int LTR ERVK 1 2345 -4136 8 1110 396 89 0 0 chrX 68939761 68939817 -97710479 + IAPEz-int LTR ERVK 2719 2774 -3707 8 1110 3170 20 0 0 chrX 68939815 68940172 -97710124 + IAPEz-int LTR ERVK 4001 4357 -2124 8 1110 5997 62 13 18 chrX 68940163 68940938 -97709358 + IAPEz-int LTR ERVK 5709 6479 -2 8 1110 2014 121 15 3 chrX 68940940 68941264 -97709032 + IAPLTR1a_Mm LTR ERVK 1 328 -9 8 1110 1542 159 3 21 chrX 68941994 68942311 -97707985 - ORR1A3 LTR MaLR 0 346 46 8 138 16428 4 0 0 chrX 68942311 68944941 -97705355 - L1Md_A LINE L1 0 6582 3954 8 1111 673 78 0 0 chrX 68944941 68945031 -97705265 - ORR1A3 LTR MaLR -304 90 1 8 1111 404 244 0 0 chrX 68945060 68945138 -97705158 + ID4_ SINE ID 3 80 -3 8 1111 285 109 0 0 chrX 68945191 68945237 -97705059 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 8 1111 495 0 0 0 chrX 68945237 68945292 -97705004 + (TTTCC)n Simple_repeat Simple_repeat 1 55 0 8 1111 636 50 0 0 chrX 68945293 68945373 -97704923 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 8 1111 764 242 206 3 chrX 68945373 68945730 -97704566 - L1_Mur3 LINE L1 -323 5557 5143 8 1111 775 312 109 0 chrX 68945727 68946031 -97704265 + Lx8 LINE L1 6789 7125 -348 8 1111 514 240 0 10 chrX 68946173 68946274 -97704022 - RSINE1 SINE B4 -65 100 1 8 1111 205 301 22 98 chrX 68946411 68946503 -97703793 - MIR3 SINE MIR -16 192 108 8 1111 441 129 0 0 chrX 68947119 68947189 -97703107 + (TA)n Simple_repeat Simple_repeat 1 70 0 8 1111 468 289 97 33 chrX 68947794 68948046 -97702250 + MLT2B1 LTR ERVL 1 268 -252 8 1111 1495 222 66 66 chrX 68948118 68948948 -97701348 + RMER19B LTR ERVK 1 890 -12 8 1111 29 28 0 0 chrX 68949375 68949411 -97700885 + AT_rich Low_complexity Low_complexity 1 36 0 8 1111 22 0 0 0 chrX 68949669 68949691 -97700605 + AT_rich Low_complexity Low_complexity 1 22 0 8 1111 205 178 43 22 chrX 68949788 68949834 -97700462 - MIR3 SINE MIR -50 158 112 8 1111 970 244 5 23 chrX 68949992 68950206 -97700090 + B3 SINE B2 1 210 -6 8 1111 1792 223 68 11 chrX 68950716 68951096 -97699200 - MTD LTR MaLR 0 419 18 8 1111 230 0 0 32 chrX 68951803 68951834 -97698462 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 8 1111 205 86 0 28 chrX 68951841 68951877 -97698419 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 8 1111 289 317 39 10 chrX 68951885 68951987 -97698309 + PB1D10 SINE Alu 5 109 -8 9 1111 632 300 94 0 chrX 68952457 68952724 -97697572 - B4A SINE B4 0 292 1 9 1111 403 322 53 49 chrX 68953285 68953510 -97696786 + L1ME1 LINE L1 5921 6146 -33 9 1111 300 264 179 18 chrX 68955041 68955153 -97695143 - ID_B1 SINE B4 -1 223 94 9 1111 180 0 0 0 chrX 68955217 68955237 -97695059 + (TTTTTG)n Simple_repeat Simple_repeat 5 24 0 9 1111 803 49 0 0 chrX 68955237 68955339 -97694957 - B1_Mm SINE Alu 0 147 46 9 1111 18018 2 0 0 chrX 68955522 68957629 -97692667 + L1Md_A LINE L1 3480 5586 -297 9 1111 9019 4 0 0 chrX 68957629 68958625 -97691671 + L1Md_A LINE L1 5587 6582 0 9 1111 1318 88 0 35 chrX 68958636 68958836 -97691460 + B2_Mm2 SINE B2 2 194 -1 9 1111 385 308 25 25 chrX 68958860 68958980 -97691316 + ID_B1 SINE B4 105 224 0 9 1111 465 277 7 74 chrX 68959019 68959069 -97691227 + RSINE1 SINE B4 28 75 -90 9 1111 2177 153 90 3 chrX 68959069 68959456 -97690840 + MTC LTR MaLR 1 421 0 9 1111 465 277 7 74 chrX 68959456 68959553 -97690743 + RSINE1 SINE B4 76 165 0 9 1111 1173 100 0 0 chrX 68959555 68959725 -97690571 + (TTTC)n Simple_repeat Simple_repeat 4 173 0 9 1111 1078 63 28 7 chrX 68960067 68960211 -97690085 - B1_Mus1 SINE Alu -1 147 1 9 1111 443 60 15 0 chrX 68960212 68960279 -97690017 + (TG)n Simple_repeat Simple_repeat 1 68 0 9 1111 485 338 25 18 chrX 68960291 68960454 -97689842 - B3A SINE B2 -34 164 1 9 1111 5607 79 24 6 chrX 68960500 68961460 -97688836 + L1VL2 LINE L1 309 1287 -2328 9 1111 2738 48 0 3 chrX 68961460 68961794 -97688502 + L1_Mus1 LINE L1 6231 6563 -4 9 1111 5607 79 38 19 chrX 68961794 68962333 -97687963 + L1VL2 LINE L1 1288 1826 -1789 9 1111 320 283 0 42 chrX 68962471 68962567 -97687729 - PB1D10 SINE Alu 0 117 26 9 1111 22 56 0 0 chrX 68963401 68963437 -97686859 + AT_rich Low_complexity Low_complexity 1 36 0 9 1111 231 203 78 0 chrX 68963538 68963602 -97686694 + L1M2 LINE L1 2745 2813 -3330 9 1111 318 372 116 31 chrX 68963896 68964154 -97686142 - L1M5 LINE L1 -1112 5034 4755 9 1111 198 103 0 0 chrX 68964186 68964215 -97686081 + (TA)n Simple_repeat Simple_repeat 2 30 0 9 1111 271 354 42 13 chrX 68964882 68965055 -97685241 + MIRc SINE MIR 2 181 -87 9 1111 714 272 76 5 chrX 68965360 68965545 -97684751 + ID_B1 SINE B4 4 201 -23 9 1111 289 298 35 0 chrX 68966777 68966891 -97683405 + L1MB3 LINE L1 6023 6140 -43 9 1111 584 214 0 26 chrX 68966893 68967008 -97683288 + B4A SINE B4 2 113 -179 9 1111 566 338 0 0 chrX 68967035 68967171 -97683125 - RSINE1 SINE B4 -2 163 28 9 1111 654 79 0 0 chrX 68967282 68967371 -97682925 + (TCC)n Simple_repeat Simple_repeat 2 90 0 9 1111 752 192 0 30 chrX 68967387 68967521 -97682775 - B1_Mm SINE Alu -17 130 1 9 1111 604 322 51 0 chrX 68967973 68968080 -97682216 + B4 SINE B4 107 217 -75 9 1111 510 0 0 41 chrX 68968080 68968153 -97682143 + (CAAAC)n Simple_repeat Simple_repeat 2 71 0 9 1111 604 322 51 0 chrX 68968153 68968222 -97682074 + B4 SINE B4 218 291 -1 9 1111 285 208 56 0 chrX 68968222 68968294 -97682002 + (CAGAGA)n Simple_repeat Simple_repeat 1 76 0 9 1111 1417 312 78 16 chrX 68968297 68969003 -97681293 + MER63D DNA AcHobo 3 752 -309 9 1111 264 30 0 0 chrX 68969211 68969244 -97681052 + (TTTAA)n Simple_repeat Simple_repeat 4 36 0 9 1111 954 227 20 5 chrX 68970181 68970385 -97679911 + B3 SINE B2 1 207 -9 9 1111 465 115 0 0 chrX 68971182 68971269 -97679027 + (TC)n Simple_repeat Simple_repeat 2 88 0 9 1111 29 0 0 0 chrX 68971546 68971575 -97678721 + AT_rich Low_complexity Low_complexity 1 29 0 9 1111 533 202 6 155 chrX 68971581 68971794 -97678502 - Lx6 LINE L1 -63 7397 7266 9 1111 616 199 43 4 chrX 68971845 68972002 -97678294 - Lx LINE L1 -234 7226 7093 9 1111 1921 156 87 11 chrX 68972079 68972435 -97677861 - ORR1B1 LTR MaLR 0 394 12 9 1111 11014 82 34 13 chrX 68972577 68972701 -97677595 - MusHAL1 LINE L1 -903 1809 1663 9 1111 753 12 0 0 chrX 68972701 68972787 -97677509 + (TTTC)n Simple_repeat Simple_repeat 3 88 0 9 1111 11014 82 34 13 chrX 68972787 68974422 -97675874 - MusHAL1 LINE L1 -1050 1662 14 9 1111 9526 125 10 6 chrX 68975047 68977364 -97672932 - Lx LINE L1 0 6654 4327 9 1111 649 242 84 93 chrX 68977364 68977578 -97672718 - MTE2a LTR MaLR -1 378 167 9 1111 525 174 0 0 chrX 68977582 68977680 -97672616 + (TTTA)n Simple_repeat Simple_repeat 1 98 0 9 1111 759 244 60 32 chrX 68977680 68977930 -97672366 - Lx5 LINE L1 0 7050 6794 9 1111 1477 220 0 21 chrX 68977908 68978233 -97672063 + Lx5 LINE L1 6105 6422 -628 9 1111 482 297 72 42 chrX 68978243 68978436 -97671860 - MTE2a LTR MaLR -220 199 1 9 1111 200 374 42 35 chrX 68978536 68978680 -97671616 + L3 LINE CR1 4234 4378 -111 9 1111 276 282 0 56 chrX 68978980 68979070 -97671226 - MLT1D LTR MaLR -7 498 414 9 1111 317 238 25 0 chrX 68979513 68979593 -97670703 + ID4_ SINE ID 2 83 0 9 1111 335 247 129 0 chrX 68979613 68979706 -97670590 + PB1D7 SINE Alu 1 105 -15 9 1111 21 36 0 0 chrX 68979885 68979913 -97670383 + AT_rich Low_complexity Low_complexity 1 28 0 9 1111 233 174 0 80 chrX 68980647 68980722 -97669574 + Lx9 LINE L1 7476 7544 -100 9 1111 417 173 58 0 chrX 68981370 68981474 -97668822 + Lx9 LINE L1 7531 7640 -4 9 1111 696 395 48 92 chrX 68981698 68982133 -97668163 + FordPrefect DNA Tip100 547 962 -721 9 1111 350 274 25 117 chrX 68982203 68982323 -97667973 + B3A SINE B2 5 113 -82 9 1111 3524 25 0 2 chrX 68982335 68982744 -97667552 - L1Md_F2 LINE L1 -14 6568 6161 9 1111 978 354 59 11 chrX 68982744 68983187 -97667109 + FordPrefect DNA Tip100 981 1444 -239 9 1111 198 222 0 0 chrX 68983351 68983405 -97666891 + (CGTG)n Simple_repeat Simple_repeat 1 54 0 9 1111 805 288 6 6 chrX 68983405 68983583 -97666713 - B3A SINE B2 -16 182 5 9 1111 1507 56 0 5 chrX 68983601 68983849 -97666447 - L1Md_F2 LINE L1 0 6582 6367 9 1111 21 0 0 0 chrX 68984955 68984976 -97665320 + AT_rich Low_complexity Low_complexity 1 21 0 9 1111 712 310 37 12 chrX 68985239 68985484 -97664812 + Lx9 LINE L1 6492 6742 -902 9 1111 335 332 59 36 chrX 68986954 68987176 -97663120 - L1ME4a LINE L1 -189 5935 5709 9 1111 246 250 78 0 chrX 68987205 68987269 -97663027 - MIR SINE MIR -21 241 173 9 1111 616 266 47 12 chrX 68987324 68987495 -97662801 - LTR90A LTR LTR -57 919 743 9 1111 204 279 211 14 chrX 68987531 68987673 -97662623 + MIRb SINE MIR 10 179 -89 9 1111 607 252 107 81 chrX 68987738 68987809 -97662487 - Lx9 LINE L1 -2 7642 7572 9 1111 5007 120 19 0 chrX 68987809 68988532 -97661764 - RMER19A LTR ERVK 0 737 1 9 1111 607 252 107 81 chrX 68988532 68988879 -97661417 - Lx9 LINE L1 -73 7571 7213 9 1111 910 234 14 11 chrX 68988943 68989228 -97661068 - L1M3 LINE L1 -1545 4595 4310 9 1111 240 23 43 43 chrX 68989246 68989292 -97661004 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 9 1111 1115 29 0 7 chrX 68989292 68989433 -97660863 - B1_Mus2 SINE Alu 0 147 8 9 1111 389 223 19 142 chrX 68989328 68989490 -97660806 - MT2B2 LTR ERVL -320 264 123 9 1111 719 212 20 26 chrX 68989490 68989763 -97660533 - L1M3 LINE L1 -2259 3887 3633 9 1111 836 237 79 57 chrX 68989761 68990115 -97660181 - L1_Rod LINE L1 -2708 3139 2778 9 1111 271 235 86 0 chrX 68990185 68990266 -97660030 + L1M2 LINE L1 5126 5213 -930 9 1111 1344 276 325 32 chrX 68990397 68990757 -97659539 - Lx8 LINE L1 -132 7341 6858 9 1111 252 59 0 0 chrX 68990757 68990791 -97659505 + (CAA)n Simple_repeat Simple_repeat 1 34 0 9 1111 1344 262 92 41 chrX 68990791 68990943 -97659353 - Lx8 LINE L1 -616 6857 6716 9 1111 540 210 0 10 chrX 68990946 68991047 -97659249 + MTD LTR MaLR 3 102 -317 9 1111 307 236 30 59 chrX 68991736 68991871 -97658425 - Lx8 LINE L1 -10 7463 7333 9 1111 212 190 0 33 chrX 68991871 68991931 -97658365 + CT-rich Low_complexity Low_complexity 4 61 0 9 1111 1013 301 87 11 chrX 68991946 68992396 -97657900 - Lx8 LINE L1 -115 7358 6875 9 1111 1125 267 18 15 chrX 68992655 68992990 -97657306 + Lx8 LINE L1 6331 6666 -807 9 1111 699 118 0 0 chrX 68993118 68993253 -97657043 + (GA)n Simple_repeat Simple_repeat 2 136 0 9 1111 944 214 52 0 chrX 68994873 68995065 -97655231 + MTD LTR MaLR 216 417 -2 9 1111 276 30 0 0 chrX 68995235 68995268 -97655028 + (TCCC)n Simple_repeat Simple_repeat 1 33 0 9 1111 852 179 0 0 chrX 68995288 68995422 -97654874 - B1_Mus1 SINE Alu -13 135 2 9 1111 379 151 82 0 chrX 68995789 68995862 -97654434 + RMER19B LTR ERVK 1 79 -823 9 1111 1933 139 30 36 chrX 68995857 68996145 -97654151 + RMER19B LTR ERVK 576 871 -31 9 1111 2994 61 25 10 chrX 68996145 68996543 -97653753 + L1Md_F2 LINE L1 6163 6566 -16 9 1111 1933 139 30 36 chrX 68996543 68996583 -97653713 + RMER19B LTR ERVK 872 902 0 9 1111 182 91 0 29 chrX 68997763 68997797 -97652499 + (TA)n Simple_repeat Simple_repeat 1 33 0 9 1111 1503 54 5 0 chrX 68998086 68998271 -97652025 + B2_Mm1t SINE B2 1 186 -7 9 1111 1943 129 16 13 chrX 68998357 68998664 -97651632 - Lx4A LINE L1 -1 7057 6750 9 1111 646 205 0 0 chrX 68998773 68998885 -97651411 + PB1D9 SINE Alu 2 113 -7 9 1111 378 0 0 0 chrX 68998890 68998932 -97651364 + (CAAAC)n Simple_repeat Simple_repeat 3 44 0 9 1111 204 67 0 0 chrX 68998932 68998962 -97651334 + (A)n Simple_repeat Simple_repeat 1 30 0 9 1111 305 297 401 12 chrX 68999122 68999374 -97650922 - L1M2 LINE L1 -1629 4511 4162 9 1111 407 234 160 0 chrX 68999377 68999471 -97650825 - PB1D7 SINE Alu -9 111 3 9 1111 212 400 30 8 chrX 69000011 69000142 -97650154 + MIR SINE MIR 55 188 -74 1 1111 24 0 0 0 chrX 69000215 69000239 -97650057 + AT_rich Low_complexity Low_complexity 1 24 0 2 1111 232 140 40 0 chrX 69000603 69000653 -97649643 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 3 1111 2148 50 0 0 chrX 69000703 69000962 -97649334 - L1Md_F2 LINE L1 -415 6167 5909 4 1111 292 0 0 0 chrX 69000961 69000994 -97649302 - L1_Mus4 LINE L1 -768 5868 5836 5 1111 3379 68 26 9 chrX 69000994 69001422 -97648874 + L1Md_F2 LINE L1 6136 6570 -12 6 1111 504 0 0 0 chrX 69002091 69002147 -97648149 + (TC)n Simple_repeat Simple_repeat 1 56 0 7 1111 279 0 0 0 chrX 69002147 69002177 -97648119 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 1111 8449 30 7 1 chrX 69002511 69003502 -97646794 - L1Md_F3 LINE L1 0 6584 5588 9 1111 862 10 0 0 chrX 69004698 69004794 -97645502 - L1Md_F3 LINE L1 -75 5808 5713 1 1111 6646 44 13 0 chrX 69004794 69005560 -97644736 + L1Md_F3 LINE L1 5807 6582 -2 1 1111 312 280 101 6 chrX 69005575 69005733 -97644563 + L1MA6 LINE L1 6021 6193 -107 1 1111 378 0 0 0 chrX 69006189 69006231 -97644065 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1111 1284 47 14 0 chrX 69006504 69006652 -97643644 - B1_Mur4 SINE Alu 0 150 1 1 1111 343 302 26 0 chrX 69007424 69007540 -97642756 - MIRc SINE MIR -55 213 95 1 1111 298 157 20 0 chrX 69007594 69007645 -97642651 - PB1 SINE Alu 0 127 76 1 1111 3694 23 2 0 chrX 69008590 69008985 -97641311 - MTA_Mm LTR MaLR 0 396 1 1 1111 474 363 30 10 chrX 69009248 69009451 -97640845 + MIR SINE MIR 35 241 -21 1 1111 264 283 69 20 chrX 69009603 69009704 -97640592 + MamRep1161 DNA TcMar 2 107 -850 1 1111 23 0 0 0 chrX 69010706 69010729 -97639567 + AT_rich Low_complexity Low_complexity 1 23 0 1 1111 207 186 0 0 chrX 69011476 69011519 -97638777 + (CAAAC)n Simple_repeat Simple_repeat 2 44 0 2 1111 693 275 0 0 chrX 69013908 69014050 -97636246 + B1_Mur1 SINE Alu 1 142 -7 2 1111 263 174 0 0 chrX 69014099 69014145 -97636151 - L1_Mur1 LINE L1 -304 5582 5537 2 1111 273 203 0 15 chrX 69014133 69014198 -97636098 + Lx6 LINE L1 7320 7383 -77 2 1111 307 200 41 8 chrX 69014198 69014319 -97635977 + Lx6 LINE L1 7336 7460 0 2 1111 235 229 0 0 chrX 69014342 69014390 -97635906 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1111 1393 222 119 18 chrX 69014709 69015044 -97635252 - ORR1D2 LTR MaLR 0 370 2 2 1111 226 376 14 14 chrX 69015936 69016044 -97634252 - L2c LINE L2 -6 3369 3258 2 1111 343 232 37 0 chrX 69016699 69016781 -97633515 + ID_B1 SINE B4 104 188 -36 2 1111 989 216 55 0 chrX 69017759 69017940 -97632356 - B3 SINE B2 -25 191 1 2 1111 4834 119 57 0 chrX 69018121 69018844 -97631452 - L1_Mm LINE L1 -7 5876 5113 3 1111 6478 82 40 1 chrX 69018844 69019683 -97630613 + L1_Mus4 LINE L1 5752 6623 -13 3 1111 429 20 0 0 chrX 69019686 69019736 -97630560 + (GGAA)n Simple_repeat Simple_repeat 4 53 0 3 1111 232 215 36 48 chrX 69020048 69020131 -97630165 - Lx8 LINE L1 -9 7464 7383 3 1111 4605 131 21 0 chrX 69020151 69020802 -97629494 - Lx LINE L1 -6 6648 5984 3 1111 2633 205 68 8 chrX 69020831 69021392 -97628904 + Lx2B LINE L1 6070 6999 -1 3 1111 827 298 53 11 chrX 69021387 69021669 -97628627 - Lx9 LINE L1 -178 7466 7173 3 1111 24 53 0 0 chrX 69021685 69021723 -97628573 + AT_rich Low_complexity Low_complexity 1 38 0 3 1111 207 0 0 0 chrX 69021761 69021784 -97628512 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1111 392 297 31 78 chrX 69022049 69022177 -97628119 - B4A SINE B4 -169 123 2 3 1111 2495 248 58 10 chrX 69024503 69025127 -97625169 - Lx6 LINE L1 -3 7457 6804 4 1111 208 254 15 15 chrX 69025225 69025293 -97625003 + GA-rich Low_complexity Low_complexity 1 68 0 4 1111 288 0 0 0 chrX 69025518 69025550 -97624746 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1111 420 362 19 26 chrX 69025637 69025793 -97624503 + ID_B1 SINE B4 70 224 0 4 1111 238 47 70 0 chrX 69025798 69025841 -97624455 + (CAAT)n Simple_repeat Simple_repeat 2 47 0 4 1111 313 242 22 11 chrX 69026040 69026132 -97624164 - L1MA4 LINE L1 -385 5915 5823 4 1111 3133 62 10 15 chrX 69026543 69026933 -97623363 + RLTR10 LTR ERVK 1 388 -2 4 1111 824 269 100 26 chrX 69027382 69027653 -97622643 + B4 SINE B4 2 292 0 4 1111 204 111 0 0 chrX 69028440 69028476 -97621820 + (CCAA)n Simple_repeat Simple_repeat 2 37 0 4 1111 295 309 122 17 chrX 69029072 69029253 -97621043 + L2b LINE L2 3148 3347 -28 4 1111 24 53 0 0 chrX 69029794 69029832 -97620464 + AT_rich Low_complexity Low_complexity 1 38 0 5 1111 358 339 98 20 chrX 69030650 69030873 -97619423 + MIRb SINE MIR 3 242 -26 5 1111 672 197 0 8 chrX 69031527 69031645 -97618651 + B1_Mur2 SINE Alu 26 142 -7 5 1111 467 289 9 0 chrX 69031744 69031858 -97618438 + PB1D10 SINE Alu 2 116 -1 5 1111 504 355 0 0 chrX 69032229 69032367 -97617929 - B1F2 SINE Alu 0 149 12 5 1111 216 267 17 0 chrX 69032574 69032634 -97617662 + L3 LINE CR1 4340 4400 -89 5 1111 545 290 38 0 chrX 69033411 69033542 -97616754 - B1F SINE Alu -4 145 10 5 1111 452 355 71 12 chrX 69033689 69033943 -97616353 - L1MEg LINE L1 -5085 999 731 5 1111 253 293 160 16 chrX 69034206 69034400 -97615896 - L1MEg LINE L1 -5375 709 488 5 1111 566 186 97 0 chrX 69034572 69034685 -97615611 + B1_Mur2 SINE Alu 25 148 -1 5 1111 294 284 190 0 chrX 69035455 69035571 -97614725 - L1MC LINE L1 -2181 5701 5564 5 1111 198 0 0 0 chrX 69035577 69035599 -97614697 + (TG)n Simple_repeat Simple_repeat 2 23 0 6 1111 269 161 15 88 chrX 69035862 69035930 -97614366 - L1MA5 LINE L1 -363 5937 5875 6 1111 213 39 0 0 chrX 69036689 69036715 -97613581 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 6 1111 3809 47 9 0 chrX 69036852 69037297 -97612999 + L1Md_F2 LINE L1 6134 6582 0 6 1111 451 278 113 53 chrX 69037652 69038120 -97612176 + L1ME4a LINE L1 5254 5749 -375 6 1111 330 292 54 59 chrX 69038156 69038378 -97611918 + L1ME4a LINE L1 5847 6067 -57 6 1111 394 282 33 0 chrX 69038576 69038727 -97611569 - L1MC4a LINE L1 -143 5981 5816 6 1111 364 253 0 0 chrX 69038748 69038835 -97611461 - L1M3 LINE L1 -1520 4620 4534 6 1111 3603 56 2 55 chrX 69039412 69039881 -97610415 - L1_Mus1 LINE L1 0 6567 6124 6 1111 263 113 18 36 chrX 69040027 69040082 -97610214 + MTE2a-int LTR MaLR 1205 1258 0 6 1111 299 269 140 28 chrX 69040098 69040205 -97610091 + MTE2a LTR MaLR 13 131 -248 6 1111 710 344 40 40 chrX 69040134 69040510 -97609786 + MT2A LTR ERVL 60 435 -98 6 1111 459 272 77 49 chrX 69040764 69040907 -97609389 - B1_Mus2 SINE Alu 0 147 1 7 1111 273 163 0 0 chrX 69041140 69041189 -97609107 + CT-rich Low_complexity Low_complexity 5 53 0 7 1111 523 253 116 0 chrX 69041979 69042125 -97608171 + RSINE1 SINE B4 3 165 0 7 1111 246 136 0 0 chrX 69042125 69042169 -97608127 + (CATG)n Simple_repeat Simple_repeat 1 44 0 7 1111 1552 70 35 0 chrX 69042547 69042748 -97607548 + L1Md_F2 LINE L1 6363 6570 -12 7 1111 250 236 0 144 chrX 69043238 69043342 -97606954 - MIRc SINE MIR -60 208 120 7 1111 328 292 113 23 chrX 69043578 69043711 -97606585 - MIR SINE MIR -86 176 32 7 1111 216 0 0 0 chrX 69043840 69043864 -97606432 + (CAAAAA)n Simple_repeat Simple_repeat 3 26 0 7 1111 234 0 0 0 chrX 69043864 69043890 -97606406 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 1111 255 61 0 0 chrX 69043890 69043922 -97606374 + (TA)n Simple_repeat Simple_repeat 2 34 0 7 1111 298 276 64 45 chrX 69044037 69044147 -97606149 + PB1 SINE Alu 1 112 -15 8 1111 620 259 7 0 chrX 69044668 69044807 -97605489 - ID_B1 SINE B4 -3 221 82 8 1111 363 296 35 9 chrX 69045292 69045408 -97604888 + PB1D9 SINE Alu 2 120 0 8 1111 29 0 0 0 chrX 69045860 69045889 -97604407 + AT_rich Low_complexity Low_complexity 1 29 0 8 1111 250 284 45 18 chrX 69046183 69046294 -97604002 + L1MD LINE L1 4138 4251 -1895 8 1111 352 285 92 10 chrX 69046415 69046610 -97603686 + L1M4 LINE L1 4704 4914 -1232 8 1111 4523 37 4 0 chrX 69046676 69047186 -97603110 + L1Md_F2 LINE L1 6071 6582 0 8 1111 6184 53 6 6 chrX 69047186 69047989 -97602307 + L1Md_F3 LINE L1 5789 6584 0 8 1111 464 279 22 7 chrX 69047999 69048136 -97602160 + B1_Mur1 SINE Alu 2 140 -9 8 1111 375 333 0 25 chrX 69048180 69048300 -97601996 + PB1D10 SINE Alu 1 117 0 8 1111 5515 37 5 0 chrX 69048327 69048949 -97601347 + L1Md_F2 LINE L1 5954 6578 -4 9 1111 25 0 0 0 chrX 69049422 69049447 -97600849 + AT_rich Low_complexity Low_complexity 1 25 0 9 1111 226 348 43 64 chrX 69049612 69049753 -97600543 + MLT1D LTR MaLR 104 241 -264 9 1111 373 310 107 14 chrX 69050001 69050370 -97599926 + L1MD LINE L1 5308 5709 -650 9 1111 350 253 22 0 chrX 69050433 69050524 -97599772 + L1ME1 LINE L1 6068 6160 -19 9 1111 309 287 12 9 chrX 69050623 69050726 -97599570 + L2b LINE L2 3280 3383 -4 9 1111 1014 284 67 47 chrX 69051279 69051520 -97598776 + MTEa LTR MaLR 1 235 -144 9 1111 2852 29 181 0 chrX 69051520 69051868 -97598428 - IAPLTR2a LTR ERVK 0 411 1 9 1111 1014 284 67 47 chrX 69051868 69051969 -97598327 + MTEa LTR MaLR 236 350 -29 9 1111 648 253 79 44 chrX 69052466 69052669 -97597627 + B3A SINE B2 7 216 0 9 1111 369 231 35 113 chrX 69052782 69052911 -97597385 + MTEa LTR MaLR 213 347 -32 9 1111 2780 23 2 253 chrX 69052911 69053432 -97596864 - RLTR10 LTR ERVK 0 390 1 1 1111 369 229 15 132 chrX 69053432 69053459 -97596837 + MTEa LTR MaLR 348 373 -6 9 1111 357 82 0 0 chrX 69053727 69053776 -97596520 + (TATG)n Simple_repeat Simple_repeat 3 51 0 1 1111 1205 184 0 10 chrX 69053900 69054103 -97596193 + URR1B DNA MER1_type 1 201 -24 1 1111 186 351 40 0 chrX 69054190 69054264 -97596032 + MIR3 SINE MIR 118 194 -14 1 1111 3860 73 8 2 chrX 69054809 69055289 -97595007 + L1_Mus1 LINE L1 6085 6567 0 1 1111 979 16 8 16 chrX 69055420 69055486 -97594810 + (TTC)n Simple_repeat Simple_repeat 1 66 0 1 1111 1242 100 0 0 chrX 69055486 69055666 -97594630 + (TCC)n Simple_repeat Simple_repeat 1 180 0 1 1111 979 16 8 16 chrX 69055666 69055725 -97594571 + (TTC)n Simple_repeat Simple_repeat 2 60 0 1 1111 306 0 0 0 chrX 69056232 69056266 -97594030 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 1111 225 0 0 0 chrX 69056266 69056290 -97594006 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 1111 304 319 18 122 chrX 69056388 69056552 -97593744 - B1F2 SINE Alu -2 147 1 1 1111 435 83 0 0 chrX 69056552 69056612 -97593684 + (TCC)n Simple_repeat Simple_repeat 2 61 0 1 1111 1985 165 128 0 chrX 69056625 69057079 -97593217 - Lx9 LINE L1 -8 7636 7125 1 1111 275 259 27 36 chrX 69057146 69057258 -97593038 + MER67C LTR ERV1 599 709 -2 1 1111 227 240 0 39 chrX 69057654 69057706 -97592590 - ID4_ SINE ID -13 70 21 1 1111 183 376 108 10 chrX 69059731 69059833 -97590463 + MIR SINE MIR 21 132 -76 1 1111 784 264 235 35 chrX 69059932 69060273 -97590023 + MLT1C LTR MaLR 59 467 0 1 1111 442 264 82 8 chrX 69060660 69060782 -97589514 + B1F1 SINE Alu 10 140 -9 1 1111 256 271 0 41 chrX 69060804 69060877 -97589419 + ID4 SINE ID 5 74 -9 1 1111 200 34 0 33 chrX 69060885 69060915 -97589381 + (CCCCCT)n Simple_repeat Simple_repeat 6 34 0 1 1111 468 91 0 0 chrX 69063557 69063623 -97586673 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 1111 575 190 124 23 chrX 69063638 69063767 -97586529 - B3A SINE B2 -55 143 2 1 1111 486 306 20 34 chrX 69063826 69063975 -97586321 + B1F1 SINE Alu 3 149 0 1 1111 229 283 19 0 chrX 69063976 69064029 -97586267 + ID SINE ID 2 55 -169 1 1111 267 103 0 0 chrX 69064348 69064387 -97585909 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1 1111 201 329 0 60 chrX 69065376 69065460 -97584836 + L2 LINE L2 427 505 -2914 1 1111 246 88 0 0 chrX 69065696 69065730 -97584566 + ID_B1 SINE B4 189 222 -2 1 1111 357 162 167 28 chrX 69065960 69066068 -97584228 - Lx9 LINE L1 -529 7115 6993 1 1111 284 252 126 30 chrX 69067558 69067693 -97582603 + L1MA7 LINE L1 6137 6284 -7 1 1111 338 245 57 2 chrX 69068878 69068963 -97581333 + PB1D10 SINE Alu 28 123 -4 1 1111 254 316 51 0 chrX 69069654 69069733 -97580563 - MIRc SINE MIR 0 268 186 1 1111 228 339 192 17 chrX 69070350 69070367 -97579929 + B1F1 SINE Alu 1 141 -8 1 1111 350 262 146 0 chrX 69070367 69070470 -97579826 + ID_B1 SINE B4 99 216 -8 1 1111 228 182 0 0 chrX 69070600 69070644 -97579652 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1111 546 246 39 72 chrX 69071447 69071627 -97578669 - MER2 DNA MER2_type -68 277 104 1 1111 23 0 0 0 chrX 69071939 69071962 -97578334 + AT_rich Low_complexity Low_complexity 1 23 0 1 1111 1267 108 108 0 chrX 69072296 69072400 -97577896 - Lx LINE L1 -8 6646 6538 1 1111 207 0 0 0 chrX 69072400 69072423 -97577873 + (CCCA)n Simple_repeat Simple_repeat 3 25 0 1 1111 1267 108 108 0 chrX 69072423 69072531 -97577765 - Lx LINE L1 -117 6537 6413 1 1111 640 267 0 0 chrX 69072855 69072990 -97577306 + ID_B1 SINE B4 78 212 -12 1 1111 216 0 0 0 chrX 69072993 69073017 -97577279 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1111 297 0 0 0 chrX 69073017 69073049 -97577247 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 1111 601 316 52 10 chrX 69073056 69073248 -97577048 - MLT1B LTR MaLR -66 324 125 1 1111 184 317 17 0 chrX 69073532 69073592 -97576704 + L2b LINE L2 3298 3358 -17 1 1111 1119 93 37 6 chrX 69073726 69073889 -97576407 - B2_Mm2 SINE B2 -26 169 2 1 1111 4174 158 91 78 chrX 69073891 69074486 -97575810 - RMER19B LTR ERVK -18 884 232 1 1111 289 0 49 0 chrX 69074486 69074527 -97575769 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 1 1111 4174 158 91 78 chrX 69074527 69074803 -97575493 - RMER19B LTR ERVK -671 231 3 1 1111 429 278 24 8 chrX 69074803 69074923 -97575373 - MTEa LTR MaLR -257 122 1 1 1112 602 259 23 0 chrX 69075097 69075228 -97575068 - RSINE1 SINE B4 -29 136 3 1 1112 1094 253 157 89 chrX 69075476 69075854 -97574442 - L1MC1 LINE L1 -155 6178 5723 1 1112 216 0 0 0 chrX 69075854 69075878 -97574418 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1 1112 1094 253 157 89 chrX 69075878 69076013 -97574283 - L1MC1 LINE L1 -611 5722 5590 1 1112 872 113 35 28 chrX 69076013 69076158 -97574138 + B1_Mur4 SINE Alu 5 150 0 1 1112 1094 253 157 89 chrX 69076158 69076382 -97573914 - L1MC1 LINE L1 -744 5589 5392 1 1112 395 262 28 28 chrX 69076480 69076586 -97573710 - B4 SINE B4 0 292 187 1 1112 4113 48 27 2 chrX 69076607 69077128 -97573168 + L1_Mus3 LINE L1 6101 6634 -4 1 1112 1062 186 22 18 chrX 69079276 69079501 -97570795 - URR1A DNA MER1_type 0 226 1 1 1112 2982 41 7 81 chrX 69080312 69080733 -97569563 + RLTR10 LTR ERVK 1 390 0 1 1112 2050 42 4 0 chrX 69080743 69081006 -97569290 + RLTR10-int LTR ERVK 41 304 -1683 1 1112 226 369 31 54 chrX 69081137 69081266 -97569030 - Lx8 LINE L1 -236 7237 7112 1 1112 439 238 65 62 chrX 69081507 69081722 -97568574 - RMER21B LTR ERV1 -332 510 116 1 1112 417 39 0 0 chrX 69082066 69082117 -97568179 + (T)n Simple_repeat Simple_repeat 1 51 0 1 1112 21 0 0 0 chrX 69083568 69083589 -97566707 + AT_rich Low_complexity Low_complexity 1 21 0 1 1112 387 352 27 20 chrX 69083751 69083899 -97566397 - B1F SINE Alu 0 149 1 1 1112 239 54 0 26 chrX 69084030 69084068 -97566228 + (TATG)n Simple_repeat Simple_repeat 3 39 0 1 1112 1296 156 15 0 chrX 69084711 69084910 -97565386 - B3 SINE B2 -10 206 5 1 1112 984 213 5 34 chrX 69085197 69085401 -97564895 + B3A SINE B2 1 198 0 1 1112 934 215 70 25 chrX 69085423 69085623 -97564673 + B3 SINE B2 1 209 -7 1 1112 1089 247 59 17 chrX 69085736 69086090 -97564206 - L1MA4A LINE L1 -375 5928 5560 1 1112 340 257 0 0 chrX 69086504 69086574 -97563722 - L1M5 LINE L1 -689 5551 5482 1 1112 815 9 0 0 chrX 69086743 69086848 -97563448 - L1Md_T LINE L1 -2 6580 6476 1 1112 3458 31 0 0 chrX 69086848 69087269 -97563027 + L1Md_T LINE L1 6045 6465 -117 1 1112 681 262 16 43 chrX 69089412 69089599 -97560697 + B3A SINE B2 1 182 -16 1 1112 425 338 155 16 chrX 69089641 69090029 -97560267 + L2 LINE L2 2318 2759 -660 1 1112 411 238 20 0 chrX 69090697 69090798 -97559498 + RMER1C Other Other 1039 1141 -201 1 1112 475 321 0 0 chrX 69091670 69091776 -97558520 + RSINE1 SINE B4 19 124 -41 1 1112 335 322 55 36 chrX 69091988 69092195 -97558101 + MIRb SINE MIR 22 236 -40 1 1112 936 176 0 0 chrX 69092393 69092541 -97557755 - B1_Mur3 SINE Alu -1 148 1 1 1112 552 236 183 33 chrX 69092548 69092701 -97557595 - B3 SINE B2 0 216 41 1 1112 4755 220 50 35 chrX 69092718 69093874 -97556422 - RMER1C Other Other -168 1174 1 1 1112 529 191 9 9 chrX 69093962 69094078 -97556218 - RMER1B Other Other -354 712 597 1 1112 542 191 228 8 chrX 69094119 69094246 -97556050 - ORR1C2 LTR MaLR -41 343 189 1 1112 585 118 9 0 chrX 69094246 69094339 -97555957 - ORR1C2 LTR MaLR -299 85 1 1 1112 416 332 5 0 chrX 69094351 69094541 -97555755 + L1MB3 LINE L1 5815 6005 -178 1 1112 270 358 0 0 chrX 69094609 69094690 -97555606 + ID4_ SINE ID 1 81 -2 1 1112 3823 143 9 6 chrX 69094833 69095714 -97554582 + Lx5 LINE L1 5385 6275 -775 1 1112 601 146 9 26 chrX 69095715 69095828 -97554468 + RMER19B LTR ERVK 215 325 -577 1 1112 229 203 161 35 chrX 69095831 69095974 -97554322 + Lx5 LINE L1 6890 7050 0 1 1112 1262 234 31 4 chrX 69096095 69096353 -97553943 - B4 SINE B4 -17 275 11 1 1112 367 233 220 0 chrX 69097887 69098037 -97552259 - L1MC4a LINE L1 -17 7865 7683 1 1112 632 271 35 18 chrX 69098053 69098222 -97552074 - MER5B DNA MER1_type -6 172 1 1 1112 296 317 19 58 chrX 69098281 69098435 -97551861 + RSINE1 SINE B4 2 149 -16 1 1112 211 28 27 27 chrX 69098453 69098490 -97551806 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1112 878 227 33 24 chrX 69098527 69098739 -97551557 + B3 SINE B2 3 216 0 1 1112 398 317 20 33 chrX 69098816 69098966 -97551330 + RSINE1 SINE B4 3 150 -15 1 1112 237 284 0 56 chrX 69099070 69099178 -97551118 + GA-rich Low_complexity Low_complexity 1 102 0 1 1112 574 246 28 0 chrX 69099424 69099591 -97550705 - L1MD LINE L1 -672 5772 5580 1 1112 306 257 279 34 chrX 69099612 69099910 -97550386 - L1MD LINE L1 -848 5511 5141 1 1112 342 169 0 0 chrX 69100212 69100277 -97550019 + GA-rich Low_complexity Low_complexity 3 67 0 1 1112 648 128 0 0 chrX 69100483 69100616 -97549680 + (TC)n Simple_repeat Simple_repeat 2 134 0 1 1112 1003 293 126 21 chrX 69100647 69101268 -97549028 - L1_Rod LINE L1 -54 5793 5108 1 1112 1145 255 123 46 chrX 69101273 69101663 -97548633 + MTC LTR MaLR 1 420 -1 1 1112 535 294 62 23 chrX 69101665 69101971 -97548325 - L1M3 LINE L1 -973 5170 4853 1 1112 719 241 45 114 chrX 69101982 69102140 -97548156 + B3 SINE B2 3 153 -63 1 1112 486 49 0 0 chrX 69102140 69102201 -97548095 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 1112 505 241 45 114 chrX 69102201 69102243 -97548053 + B2_Mm2 SINE B2 149 189 -6 1 1112 611 284 154 67 chrX 69102259 69102962 -97547334 - L1M3 LINE L1 -1315 4828 4065 1 1112 201 74 0 0 chrX 69103038 69103065 -97547231 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 1112 621 276 43 16 chrX 69103068 69103256 -97547040 - Lx6 LINE L1 -46 7414 7222 1 1112 1005 262 115 22 chrX 69103264 69103716 -97546580 - L1M3 LINE L1 -2106 4034 3541 1 1112 577 272 22 90 chrX 69103829 69104007 -97546289 - B3A SINE B2 -3 192 27 1 1112 340 144 82 10 chrX 69104024 69104122 -97546174 - Lx5 LINE L1 -3 7047 6943 2 1112 267 235 82 0 chrX 69104150 69104235 -97546061 - L1MD LINE L1 -1089 5057 4966 1 1112 299 343 0 10 chrX 69104362 69104462 -97545834 - MIRb SINE MIR -76 192 94 2 1112 625 281 117 67 chrX 69104499 69105434 -97544862 - L1MD LINE L1 -2379 3767 2787 1 1112 21 0 0 0 chrX 69105557 69105578 -97544718 + AT_rich Low_complexity Low_complexity 1 21 0 2 1112 7936 70 37 2 chrX 69105578 69106657 -97543639 - Lx3_Mus LINE L1 -4 7005 5889 2 1112 1233 41 0 0 chrX 69106788 69106935 -97543361 - B1_Mus2 SINE Alu 0 147 1 2 1112 3278 56 16 25 chrX 69106942 69107379 -97542917 - L1Md_F2 LINE L1 -2 6580 6148 2 1112 281 260 41 10 chrX 69107526 69107623 -97542673 - L1MD LINE L1 -1874 4272 4173 2 1112 388 267 192 16 chrX 69107606 69107929 -97542367 + L1_Rod LINE L1 5025 5404 -443 2 1112 911 172 8 2 chrX 69107931 69108093 -97542203 + ORR1B1 LTR MaLR 104 338 -56 2 1112 990 99 0 7 chrX 69108094 69108246 -97542050 - L1_Mur1 LINE L1 -1666 4220 4070 2 1112 372 57 57 0 chrX 69108256 69108309 -97541987 + ORR1A4 LTR MaLR 274 329 0 2 1112 381 22 0 0 chrX 69108943 69108989 -97541307 + (TAAAA)n Simple_repeat Simple_repeat 2 47 0 2 1112 590 281 106 0 chrX 69108989 69109200 -97541096 + MLT1B LTR MaLR 34 267 -123 2 1112 252 86 0 0 chrX 69109287 69109322 -97540974 + (TCC)n Simple_repeat Simple_repeat 2 36 0 2 1112 234 174 22 0 chrX 69109323 69109369 -97540927 + (CCA)n Simple_repeat Simple_repeat 1 47 0 2 1112 210 171 0 0 chrX 69109755 69109790 -97540506 - ID4_ SINE ID 0 83 49 2 1112 871 230 65 0 chrX 69109836 69110036 -97540260 + B3 SINE B2 1 213 -3 2 1112 306 0 0 0 chrX 69110514 69110548 -97539748 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2 1112 7421 54 13 2 chrX 69110558 69111752 -97538544 - L1Md_F2 LINE L1 -11 6571 5367 2 1112 12287 78 6 5 chrX 69111748 69114402 -97535894 - L1Md_F2 LINE L1 -2855 3028 374 2 1112 5339 57 0 3 chrX 69114405 69115076 -97535220 - L1_Mus1 LINE L1 -2 6565 5897 2 1112 542 235 26 32 chrX 69115172 69115326 -97534970 - Lx5 LINE L1 -26 7024 6872 2 1112 197 318 11 64 chrX 69115416 69115510 -97534786 - L2c LINE L2 0 3387 3299 2 1112 562 251 81 32 chrX 69115571 69115756 -97534540 + MTC-int LTR MaLR 865 1058 -200 2 1112 8532 10 0 1 chrX 69115767 69117392 -97532904 - L1Md_T LINE L1 0 6582 4960 2 1112 216 0 0 0 chrX 69117453 69117477 -97532819 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1112 37 0 0 0 chrX 69117494 69117531 -97532765 + AT_rich Low_complexity Low_complexity 1 37 0 2 1112 1172 254 65 0 chrX 69117781 69118060 -97532236 - MTEa LTR MaLR -79 300 4 2 1112 21 36 0 0 chrX 69118338 69118366 -97531930 + AT_rich Low_complexity Low_complexity 1 28 0 2 1112 532 270 74 35 chrX 69118861 69118998 -97531298 + L1ME2 LINE L1 5337 5468 -711 2 1112 686 72 0 10 chrX 69118998 69119096 -97531200 + (GAAA)n Simple_repeat Simple_repeat 4 100 0 2 1112 532 294 109 48 chrX 69119096 69119687 -97530609 + L1ME2 LINE L1 5469 6137 -42 2 1112 366 253 0 12 chrX 69119687 69119771 -97530525 + ID4_ SINE ID 1 83 0 2 1112 359 294 92 60 chrX 69119771 69119821 -97530475 + L1ME2 LINE L1 6138 6176 -3 2 1112 594 141 0 0 chrX 69120196 69120324 -97529972 + (GA)n Simple_repeat Simple_repeat 1 128 0 2 1112 216 0 0 0 chrX 69120577 69120601 -97529695 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 2 1112 254 356 11 0 chrX 69120778 69120865 -97529431 - BC1_Mm scRNA scRNA -64 88 1 2 1112 212 275 111 42 chrX 69121863 69121935 -97528361 + MIRm SINE MIR 5 81 -195 2 1112 23 0 0 0 chrX 69122047 69122070 -97528226 + AT_rich Low_complexity Low_complexity 1 23 0 2 1112 258 304 114 82 chrX 69122425 69122583 -97527713 + B2_Mm2 SINE B2 4 166 -29 2 1112 767 126 8 0 chrX 69123212 69123339 -97526957 + (TTCC)n Simple_repeat Simple_repeat 4 131 0 2 1112 512 175 211 0 chrX 69123350 69123464 -97526832 - B1_Mus1 SINE Alu -5 143 6 2 1112 713 250 46 27 chrX 69123617 69123861 -97526435 - MT2B LTR ERVL -140 461 56 2 1112 417 245 30 20 chrX 69123846 69123946 -97526350 - MT2B LTR ERVL -497 104 4 2 1112 226 200 0 22 chrX 69124082 69124128 -97526168 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 1112 1858 200 43 69 chrX 69124183 69124491 -97525805 - Lx7 LINE L1 0 7696 7390 2 1112 435 38 0 0 chrX 69124491 69124544 -97525752 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1112 1858 200 43 69 chrX 69124544 69124772 -97525524 - Lx7 LINE L1 -307 7389 7174 2 1112 486 238 6 175 chrX 69124822 69125005 -97525291 - ID_B1 SINE B4 -3 221 70 2 1112 1686 171 6 0 chrX 69125203 69125518 -97524778 + Lx3C LINE L1 6214 6530 -446 2 1112 2122 113 30 21 chrX 69125518 69125852 -97524444 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1112 5710 57 13 7 chrX 69125854 69126620 -97523676 - IAPEz-int LTR ERVK -2 6479 5709 2 1112 2924 28 0 0 chrX 69126611 69126968 -97523328 - IAPEz-int LTR ERVK -2124 4357 4001 2 1112 346 125 0 0 chrX 69126966 69127022 -97523274 - IAPEz-int LTR ERVK -3707 2774 2719 2 1112 12085 69 119 25 chrX 69127021 69129157 -97521139 - IAPEz-int LTR ERVK -4136 2345 8 2 1112 2122 113 30 21 chrX 69129157 69129491 -97520805 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1112 2160 179 76 13 chrX 69129491 69129939 -97520357 + Lx2B LINE L1 6522 6997 -3 2 1112 327 290 0 14 chrX 69130242 69130312 -97519984 + ID SINE ID 5 73 -151 2 1112 260 312 0 51 chrX 69130243 69130341 -97519955 + BC1_Mm scRNA scRNA 6 98 -54 2 1112 550 307 120 0 chrX 69130349 69130541 -97519755 + ID_B1 SINE B4 2 216 -8 2 1112 231 271 41 10 chrX 69130541 69130638 -97519658 + L1M4 LINE L1 3728 3827 -2319 2 1112 560 207 138 0 chrX 69130676 69130821 -97519475 - Tigger1 DNA MER2_type -24 2394 2230 2 1112 355 231 36 27 chrX 69130844 69130955 -97519341 - Tigger1 DNA MER2_type -357 2061 1950 2 1112 385 293 16 16 chrX 69131059 69131184 -97519112 + PB1 SINE Alu 1 125 -2 2 1112 243 261 149 21 chrX 69131327 69131421 -97518875 - LTR31 LTR ERV1 -60 559 454 2 1112 1019 142 28 22 chrX 69131424 69131604 -97518692 - B2_Mm2 SINE B2 -14 181 1 2 1112 327 271 12 0 chrX 69131629 69131714 -97518582 + PB1D10 SINE Alu 25 110 -7 2 1112 381 252 43 74 chrX 69131728 69131891 -97518405 - RLTR9B LTR ERVK 0 437 280 2 1112 725 279 45 5 chrX 69132244 69132442 -97517854 - B3 SINE B2 -10 206 1 2 1112 281 275 67 22 chrX 69132979 69133113 -97517183 + L1M4 LINE L1 5681 5820 -304 2 1112 699 235 285 16 chrX 69133119 69133435 -97516861 - MTD LTR MaLR 0 419 19 2 1112 390 147 0 0 chrX 69134452 69134520 -97515776 + (CA)n Simple_repeat Simple_repeat 1 68 0 2 1112 372 212 0 0 chrX 69134522 69134588 -97515708 - ID2 SINE ID -2 81 16 2 1112 451 264 128 60 chrX 69134706 69134855 -97515441 - ID_B1 SINE B4 -65 159 1 2 1112 182 311 44 96 chrX 69135495 69135630 -97514666 - L2a LINE L2 -9 3417 3290 2 1112 618 82 0 0 chrX 69137085 69137170 -97513126 + (TTCC)n Simple_repeat Simple_repeat 3 87 0 2 1112 270 259 67 67 chrX 69137175 69137295 -97513001 - PB1 SINE Alu -7 120 1 2 1112 499 326 65 0 chrX 69138839 69138977 -97511319 - RSINE1 SINE B4 -16 149 3 2 1112 592 300 13 26 chrX 69139004 69139158 -97511138 - ID_B1 SINE B4 -71 153 2 2 1112 228 308 0 15 chrX 69139212 69139278 -97511018 + RLTR19C LTR ERVK 32 96 -410 2 1112 247 360 20 0 chrX 69139606 69139706 -97510590 + RLTR33 LTR ERVK 500 601 -77 2 1112 261 0 0 0 chrX 69139909 69139938 -97510358 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1112 588 31 85 8 chrX 69140065 69140194 -97510102 + (GA)n Simple_repeat Simple_repeat 1 139 0 2 1112 277 319 0 0 chrX 69140500 69140572 -97509724 + ID SINE ID 12 83 -141 2 1112 419 262 0 72 chrX 69140720 69140771 -97509525 - ID_B1 SINE B4 -1 223 178 2 1112 3407 25 5 0 chrX 69140771 69141165 -97509131 + MTA_Mm LTR MaLR 1 396 0 2 1112 9171 30 6 1 chrX 69141165 69142258 -97508038 + MTA_Mm-int LTR MaLR 1 1098 0 2 1112 3407 25 5 0 chrX 69142258 69142652 -97507644 + MTA_Mm LTR MaLR 1 396 0 2 1112 419 262 0 72 chrX 69142652 69142709 -97507587 - ID_B1 SINE B4 -47 177 123 2 1112 225 222 125 16 chrX 69144029 69144093 -97506203 - RSINE1 SINE B4 -24 141 71 2 1112 333 342 6 85 chrX 69146002 69146178 -97504118 - RSINE1 SINE B4 -2 163 2 2 1112 2168 15 119 0 chrX 69146327 69146588 -97503708 - RLTR10B LTR ERVK 0 292 1 2 1112 484 284 69 0 chrX 69146771 69146887 -97503409 - RSINE1 SINE B4 -40 125 2 2 1112 586 325 39 0 chrX 69147246 69147400 -97502896 - B3 SINE B2 -4 212 53 2 1112 252 0 0 0 chrX 69147978 69148006 -97502290 + (TC)n Simple_repeat Simple_repeat 2 29 0 2 1112 546 16 0 0 chrX 69148006 69148068 -97502228 + (TA)n Simple_repeat Simple_repeat 2 64 0 2 1112 1875 191 37 39 chrX 69148112 69148543 -97501753 - Lx5 LINE L1 -422 6628 6199 2 1112 400 224 56 9 chrX 69149339 69149447 -97500849 + RLTR42-int LTR ERVK 1144 1256 -4266 2 1112 375 195 35 0 chrX 69149496 69149583 -97500713 + RLTR19-int LTR ERVK 888 977 -5160 2 1112 524 170 0 114 chrX 69149855 69150021 -97500275 + RLTR19-int LTR ERVK 1014 1160 -4977 2 1112 274 333 28 0 chrX 69150021 69150093 -97500203 + MTC-int LTR MaLR 466 539 -719 2 1112 513 283 122 49 chrX 69150089 69150218 -97500078 + MTC-int LTR MaLR 910 1062 -196 2 1112 663 82 0 0 chrX 69150218 69150315 -97499981 + L1_Mus2 LINE L1 6469 6565 -1 2 1112 513 283 122 49 chrX 69150315 69150471 -97499825 + MTC-int LTR MaLR 1063 1216 -42 2 1112 661 267 57 6 chrX 69150485 69150662 -97499634 + URR1B DNA MER1_type 40 225 0 2 1112 2533 214 84 100 chrX 69150917 69151904 -97498392 + RLTR19-int LTR ERVK 3410 4380 -1757 2 1112 4053 54 2 2 chrX 69152742 69153245 -97497051 + L1_Mus2 LINE L1 6064 6566 0 2 1112 1170 117 0 0 chrX 69153281 69153460 -97496836 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 2 1112 569 83 12 0 chrX 69153481 69153565 -97496731 + (GAAA)n Simple_repeat Simple_repeat 3 87 0 2 1112 330 204 0 0 chrX 69154468 69154566 -97495730 + CT-rich Low_complexity Low_complexity 1 98 0 2 1112 4545 155 47 79 chrX 69154566 69155489 -97494807 - RMER19B LTR ERVK 0 902 10 2 1112 516 16 0 0 chrX 69155490 69155551 -97494745 + (TC)n Simple_repeat Simple_repeat 1 61 0 2 1112 253 299 27 4 chrX 69156422 69156497 -97493799 + ID4 SINE ID 9 80 -3 2 1112 4355 66 12 2 chrX 69157288 69157893 -97492403 - L1_Mm LINE L1 -395 5488 4878 2 1112 1226 80 79 11 chrX 69157893 69158082 -97492214 + L1Md_F2 LINE L1 6376 6577 -5 2 1112 229 26 53 0 chrX 69158189 69158227 -97492069 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 2 1112 962 242 80 59 chrX 69158378 69158664 -97491632 - B4A SINE B4 0 292 1 2 1112 1233 34 0 0 chrX 69158739 69158885 -97491411 + B1_Mus2 SINE Alu 2 147 0 2 1112 198 0 0 0 chrX 69158885 69158907 -97491389 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1112 270 338 27 0 chrX 69158913 69159012 -97491284 + ID4 SINE ID 22 127 -25 2 1112 241 244 84 34 chrX 69159276 69159395 -97490901 - L1M5 LINE L1 -1304 4842 4718 3 1112 393 283 20 0 chrX 69159530 69159629 -97490667 + ID_B1 SINE B4 56 156 -68 3 1112 28 29 0 0 chrX 69159686 69159721 -97490575 + AT_rich Low_complexity Low_complexity 1 35 0 3 1112 414 57 0 0 chrX 69159938 69159991 -97490305 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 1112 811 254 48 14 chrX 69160311 69160519 -97489777 + B3 SINE B2 1 215 -1 3 1112 473 86 43 0 chrX 69161294 69161387 -97488909 + (TAGA)n Simple_repeat Simple_repeat 4 100 0 3 1112 315 194 76 35 chrX 69161550 69161721 -97488575 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 3 1112 671 87 16 16 chrX 69161811 69161939 -97488357 + (TAGA)n Simple_repeat Simple_repeat 1 128 0 3 1112 200 224 0 26 chrX 69162364 69162442 -97487854 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 3 1112 334 39 39 0 chrX 69162498 69162550 -97487746 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 3 1112 188 224 0 26 chrX 69162708 69162786 -97487510 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 3 1112 406 33 33 0 chrX 69162842 69162902 -97487394 + (TAGA)n Simple_repeat Simple_repeat 3 64 0 3 1112 188 224 0 26 chrX 69163060 69163138 -97487158 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 3 1112 442 31 31 0 chrX 69163194 69163258 -97487038 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 3 1112 188 224 0 26 chrX 69163416 69163494 -97486802 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 3 1112 442 31 31 0 chrX 69163550 69163614 -97486682 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 3 1112 570 79 0 0 chrX 69163803 69163892 -97486404 + (GAAA)n Simple_repeat Simple_repeat 4 92 0 3 1112 220 161 32 0 chrX 69163966 69164028 -97486268 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 3 1112 188 234 31 15 chrX 69164132 69164197 -97486099 - L2 LINE L2 -1805 1614 1549 3 1112 420 104 0 0 chrX 69164219 69164286 -97486010 + (GGAA)n Simple_repeat Simple_repeat 4 70 0 3 1112 708 45 0 0 chrX 69164291 69164379 -97485917 + (GA)n Simple_repeat Simple_repeat 2 89 0 3 1112 498 33 0 0 chrX 69164683 69164743 -97485553 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 3 1112 459 124 32 19 chrX 69164939 69165095 -97485201 + (TAGA)n Simple_repeat Simple_repeat 1 157 0 3 1112 513 0 0 0 chrX 69165283 69165340 -97484956 + (TA)n Simple_repeat Simple_repeat 2 58 0 3 1112 996 143 0 0 chrX 69165409 69165577 -97484719 + (TAGA)n Simple_repeat Simple_repeat 3 170 0 3 1112 279 273 22 11 chrX 69166763 69166852 -97483444 - PB1D10 SINE Alu -7 110 21 3 1112 217 337 84 15 chrX 69167496 69167698 -97482598 + L2 LINE L2 1760 1975 -1444 3 1112 493 294 7 40 chrX 69168234 69168383 -97481913 + RSINE1 SINE B4 11 154 -11 3 1112 25 0 0 0 chrX 69169074 69169099 -97481197 + AT_rich Low_complexity Low_complexity 1 25 0 3 1112 229 307 26 26 chrX 69169176 69169253 -97481043 + ID4 SINE ID 4 80 -3 3 1112 1005 242 0 5 chrX 69169440 69169652 -97480644 + B3 SINE B2 6 216 0 3 1112 2194 74 3 0 chrX 69169668 69169953 -97480343 + L1_Mus3 LINE L1 6246 6531 -107 3 1112 25 31 0 0 chrX 69170069 69170101 -97480195 + AT_rich Low_complexity Low_complexity 1 32 0 3 1112 22 35 0 0 chrX 69170878 69170907 -97479389 + AT_rich Low_complexity Low_complexity 1 29 0 3 1112 671 65 11 0 chrX 69171051 69171144 -97479152 + (TTCC)n Simple_repeat Simple_repeat 3 96 0 3 1112 477 273 0 0 chrX 69172168 69172289 -97478007 + Lx8 LINE L1 7155 7275 -198 3 1112 977 173 10 5 chrX 69172289 69172481 -97477815 - URR1B DNA MER1_type -1 224 32 3 1112 312 248 25 84 chrX 69172548 69172667 -97477629 + Lx8 LINE L1 7357 7468 -5 3 1112 21 0 0 0 chrX 69176091 69176112 -97474184 + AT_rich Low_complexity Low_complexity 1 21 0 3 1112 467 33 16 0 chrX 69176168 69176229 -97474067 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 3 1112 21 0 0 0 chrX 69176545 69176566 -97473730 + AT_rich Low_complexity Low_complexity 1 21 0 3 1112 365 246 8 0 chrX 69176923 69177163 -97473133 + GA-rich Low_complexity Low_complexity 1 241 0 3 1112 198 243 0 0 chrX 69177206 69177309 -97472987 + GA-rich Low_complexity Low_complexity 1 103 0 3 1112 424 248 39 23 chrX 69177324 69177338 -97472958 - B4 SINE B4 -78 214 87 3 1112 636 179 0 0 chrX 69177338 69177450 -97472846 - B1F2 SINE Alu -36 113 2 3 1112 293 271 32 89 chrX 69177857 69178015 -97472281 + L1MB8 LINE L1 5914 6062 -116 3 1112 230 218 115 0 chrX 69178148 69178235 -97472061 + L1MB8 LINE L1 6057 6153 -25 3 1112 281 180 0 0 chrX 69178266 69178316 -97471980 + ID SINE ID 3 52 -172 3 1112 689 247 41 0 chrX 69178376 69178546 -97471750 - B3 SINE B2 -12 204 28 3 1112 320 288 12 0 chrX 69178556 69178636 -97471660 + ID_B1 SINE B4 142 222 -2 3 1112 571 249 73 6 chrX 69179300 69179478 -97470818 - Lx8 LINE L1 -797 6676 6487 3 1112 306 0 0 0 chrX 69180121 69180155 -97470141 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1112 1570 75 0 0 chrX 69180564 69180765 -97469531 - L1_Mus2 LINE L1 -620 5946 5746 3 1112 458 61 0 0 chrX 69180765 69180831 -97469465 + L1_Mus2 LINE L1 6500 6565 -1 3 1112 395 194 43 77 chrX 69180990 69181107 -97469189 - ORR1D-int LTR MaLR -80 1290 1178 3 1112 194 62 31 0 chrX 69181107 69181139 -97469157 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 3 1112 1176 75 0 0 chrX 69181142 69181289 -97469007 - B1_Mus2 SINE Alu 0 147 1 3 1112 302 228 13 0 chrX 69183053 69183132 -97467164 - ID_B1 SINE B4 -2 222 143 3 1112 582 100 9 26 chrX 69183136 69183249 -97467047 - L1Md_F2 LINE L1 0 6582 6472 3 1112 276 149 0 0 chrX 69183353 69183400 -97466896 + (A)n Simple_repeat Simple_repeat 1 47 0 3 1112 387 231 56 0 chrX 69186562 69186670 -97463626 + MLT1A LTR MaLR 12 125 -249 3 1112 709 122 28 28 chrX 69188236 69188413 -97461883 + GA-rich Low_complexity Low_complexity 1 177 0 3 1112 3125 163 143 78 chrX 69188455 69188593 -97461703 - RMER19B LTR ERVK -7 895 764 3 1112 1102 99 0 0 chrX 69188593 69188734 -97461562 + B1_Mus2 SINE Alu 2 142 -5 3 1112 3125 163 143 78 chrX 69188734 69189207 -97461089 - RMER19B LTR ERVK -139 763 236 3 1112 324 0 0 0 chrX 69189207 69189243 -97461053 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1112 3125 184 100 98 chrX 69189243 69189495 -97460801 - RMER19B LTR ERVK -667 235 34 3 1112 712 177 278 6 chrX 69191047 69191223 -97459073 + URR1B DNA MER1_type 2 225 0 3 1112 417 133 0 0 chrX 69191749 69191824 -97458472 + (CACAG)n Simple_repeat Simple_repeat 1 75 0 3 1112 1403 6 23 0 chrX 69191824 69192000 -97458296 + (CACAC)n Simple_repeat Simple_repeat 1 180 0 3 1112 1165 96 11 0 chrX 69193181 69193359 -97456937 + (TC)n Simple_repeat Simple_repeat 1 180 0 3 1112 236 30 0 29 chrX 69193359 69193392 -97456904 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1112 498 151 0 0 chrX 69194102 69194208 -97456088 + (CA)n Simple_repeat Simple_repeat 1 106 0 3 1112 342 0 0 0 chrX 69194254 69194292 -97456004 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1112 303 220 0 0 chrX 69194318 69194377 -97455919 - Tigger7 DNA MER2_type -1469 1022 964 3 1112 276 339 81 24 chrX 69194399 69194523 -97455773 - Tigger7 DNA MER2_type -2263 228 98 3 1112 255 319 18 0 chrX 69194659 69194772 -97455524 + MLT1B LTR MaLR 55 169 -221 3 1112 190 253 40 40 chrX 69194967 69195066 -97455230 + L2 LINE L2 2554 2652 -767 3 1112 754 153 8 22 chrX 69195136 69195270 -97455026 - B1_Mur2 SINE Alu -6 143 12 3 1112 2081 277 52 13 chrX 69195318 69195842 -97454454 - Lx5 LINE L1 0 7050 6507 3 1112 200 333 85 12 chrX 69195859 69195941 -97454355 + L2 LINE L2 2764 2851 -568 3 1112 189 0 0 0 chrX 69195987 69196008 -97454288 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 3 1112 230 332 49 76 chrX 69196133 69196358 -97453938 - RMER2 LTR ERV1 0 567 349 3 1112 566 95 0 0 chrX 69197636 69197720 -97452576 - Lx2 LINE L1 -2 6995 6912 3 1112 1541 102 9 4 chrX 69198029 69198255 -97452041 + Lx4A LINE L1 6832 7058 0 3 1112 218 245 0 0 chrX 69198354 69198403 -97451893 - PB1 SINE Alu -9 118 70 3 1112 747 62 0 0 chrX 69198858 69198955 -97451341 + (TCCC)n Simple_repeat Simple_repeat 4 100 0 3 1112 206 109 43 0 chrX 69198960 69199006 -97451290 + CT-rich Low_complexity Low_complexity 3 50 0 3 1112 421 271 0 0 chrX 69199009 69199105 -97451191 - B3 SINE B2 -7 209 114 3 1112 203 189 19 0 chrX 69199122 69199175 -97451121 + CT-rich Low_complexity Low_complexity 3 56 0 3 1112 294 259 0 11 chrX 69199224 69199314 -97450982 + Ricksha DNA MuDR 2147 2235 -1011 3 1112 227 260 147 20 chrX 69199315 69199417 -97450879 - Lx8 LINE L1 -369 7104 6990 3 1112 793 289 15 15 chrX 69199471 69199675 -97450621 - Lx8 LINE L1 -593 6880 6677 3 1112 759 277 35 22 chrX 69199761 69199990 -97450306 + Lx8 LINE L1 7141 7372 -101 3 1112 283 292 31 0 chrX 69199992 69200088 -97450208 + Ricksha DNA MuDR 2319 2417 -829 3 1112 291 308 0 13 chrX 69200511 69200590 -97449706 - RSINE1 SINE B4 -84 81 4 3 1112 423 219 9 0 chrX 69200630 69200735 -97449561 - Lx9 LINE L1 -7 7637 7532 3 1112 223 338 14 0 chrX 69201052 69201123 -97449173 - PB1D7 SINE Alu -31 89 18 3 1112 1034 248 42 26 chrX 69201556 69201821 -97448475 - Lx2B LINE L1 -2 6998 6730 3 1112 3674 119 9 6 chrX 69201819 69202366 -97447930 + Lx2B LINE L1 6160 6708 -292 3 1112 578 264 126 9 chrX 69202536 69202758 -97447538 - L1MA7 LINE L1 -565 5735 5488 3 1112 1237 252 61 56 chrX 69202763 69203208 -97447088 + L1MA7 LINE L1 5777 6223 -68 3 1112 583 293 131 45 chrX 69203678 69204014 -97446282 + L2 LINE L2 1102 1466 -1953 3 1112 315 332 113 33 chrX 69204521 69204795 -97445501 + L2 LINE L2 2630 2925 -494 3 1112 218 226 0 70 chrX 69205036 69205093 -97445203 + L2a LINE L2 3336 3388 -38 3 1112 353 40 0 0 chrX 69205183 69205233 -97445063 - B1_Mur4 SINE Alu 0 150 101 3 1112 857 284 26 4 chrX 69205237 69205502 -97444794 - MLT1B LTR MaLR -68 322 52 3 1113 416 261 43 43 chrX 69206018 69206272 -97444024 - MIR SINE MIR -6 262 11 3 1113 285 238 24 24 chrX 69209922 69210004 -97440292 - L4 LINE RTE -191 1838 1757 3 1113 399 21 0 0 chrX 69210848 69210896 -97439400 + (TC)n Simple_repeat Simple_repeat 2 49 0 3 1113 474 18 0 0 chrX 69213081 69213136 -97437160 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 1113 340 254 14 78 chrX 69214787 69214928 -97435368 + CT-rich Low_complexity Low_complexity 3 134 0 3 1113 189 171 0 0 chrX 69215629 69215664 -97434632 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1113 368 87 0 28 chrX 69215923 69215994 -97434302 + (CAGAGA)n Simple_repeat Simple_repeat 2 70 0 3 1113 180 0 0 0 chrX 69216007 69216027 -97434269 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 1113 204 40 0 0 chrX 69216027 69216052 -97434244 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 1113 246 136 0 0 chrX 69216067 69216111 -97434185 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1113 339 141 0 0 chrX 69216141 69216205 -97434091 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 1113 189 250 45 0 chrX 69218881 69218925 -97431371 + MIRb SINE MIR 207 252 -16 4 1113 727 265 72 32 chrX 69218993 69219270 -97431026 - MLT1B LTR MaLR -34 356 69 4 1113 1189 191 9 45 chrX 69219754 69219978 -97430318 + B3 SINE B2 1 216 0 4 1113 207 0 0 0 chrX 69220608 69220631 -97429665 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1113 1698 126 49 19 chrX 69221541 69221848 -97428448 - RLTR28 LTR ERVL -4 520 205 4 1113 331 137 14 0 chrX 69221908 69221981 -97428315 - Lx4A LINE L1 -9 7049 6976 4 1113 2400 199 176 58 chrX 69221994 69222774 -97427522 - RMER19B LTR ERVK -12 890 19 4 1113 9531 108 25 6 chrX 69222793 69224440 -97425856 - Lx4A LINE L1 -66 6992 5311 4 1113 8701 92 38 2 chrX 69224436 69225661 -97424635 + Lx2 LINE L1 5729 6997 0 4 1113 1254 103 16 0 chrX 69225678 69225862 -97424434 - Lx4A LINE L1 -546 5331 5145 4 1113 1346 133 0 14 chrX 69225862 69226083 -97424213 - RLTR28 LTR ERVL -263 218 1 4 1113 363 302 127 32 chrX 69226462 69226715 -97423581 + L1_Mur3 LINE L1 4246 4522 -1358 4 1113 683 290 119 38 chrX 69227097 69227441 -97422855 + MTE2a LTR MaLR 1 372 -7 4 1113 705 30 30 0 chrX 69227865 69227965 -97422331 + (GA)n Simple_repeat Simple_repeat 2 104 0 4 1113 382 254 47 34 chrX 69228175 69228355 -97421941 + L1M5 LINE L1 5314 5493 -671 4 1113 370 243 72 39 chrX 69229564 69229744 -97420552 - MER53 DNA hAT -3 190 5 4 1113 225 262 0 32 chrX 69229894 69229957 -97420339 + CT-rich Low_complexity Low_complexity 3 63 0 4 1113 659 304 96 31 chrX 69230054 69230410 -97419886 - MLT2C1 LTR ERVL -2 395 17 4 1113 628 82 0 10 chrX 69231056 69231155 -97419141 + L1_Mus1 LINE L1 6470 6567 0 4 1113 652 69 17 33 chrX 69231830 69231950 -97418346 + L1_Mus3 LINE L1 6521 6638 0 4 1113 273 57 0 0 chrX 69232051 69232086 -97418210 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 4 1113 881 295 67 24 chrX 69232274 69232604 -97417692 + MER2 DNA MER2_type 2 345 0 4 1113 471 35 0 0 chrX 69232910 69232967 -97417329 + (TTTC)n Simple_repeat Simple_repeat 3 59 0 4 1113 309 100 0 0 chrX 69238588 69238638 -97411658 + (TTCA)n Simple_repeat Simple_repeat 4 53 0 4 1113 1428 62 46 0 chrX 69239330 69239524 -97410772 + L1Md_F3 LINE L1 6381 6583 -1 4 1113 1367 61 11 0 chrX 69240938 69241119 -97409177 + L1_Mus3 LINE L1 6448 6630 -8 4 1113 351 271 58 127 chrX 69241128 69241403 -97408893 - L1MEc LINE L1 -4947 1453 1198 4 1113 951 227 43 14 chrX 69241476 69241686 -97408610 + B3 SINE B2 1 216 0 4 1113 192 77 0 0 chrX 69242110 69242136 -97408160 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 1113 635 241 175 11 chrX 69242145 69242334 -97407962 - Lx6 LINE L1 -14 7446 7227 4 1113 1665 259 115 2 chrX 69242332 69242742 -97407554 + Lx6 LINE L1 6748 7203 -257 4 1113 517 331 100 56 chrX 69242735 69243426 -97406870 - L1MEc LINE L1 -5632 768 48 4 1113 391 340 109 31 chrX 69243557 69243851 -97406445 - L2 LINE L2 -692 2727 2411 4 1113 3395 35 0 5 chrX 69245734 69246137 -97404159 - L1Md_F2 LINE L1 -13 6569 6169 4 1113 261 0 0 0 chrX 69246366 69246395 -97403901 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1113 4244 114 20 9 chrX 69247101 69247741 -97402555 - Lx2 LINE L1 0 6997 6351 4 1113 841 115 0 0 chrX 69247741 69247854 -97402442 + Lx2 LINE L1 6225 6337 -660 4 1113 1371 62 0 0 chrX 69248774 69248952 -97401344 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 4 1113 271 312 10 10 chrX 69248990 69249087 -97401209 - BC1_Mm scRNA scRNA -54 98 2 4 1113 1364 142 36 9 chrX 69249483 69249703 -97400593 + URR1A DNA MER1_type 1 226 0 4 1113 192 40 0 0 chrX 69250155 69250180 -97400116 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 4 1113 1703 255 142 22 chrX 69256156 69256946 -97393350 - L1MB3 LINE L1 -138 6045 5149 4 1113 369 162 0 0 chrX 69257598 69257666 -97392630 + (TG)n Simple_repeat Simple_repeat 2 69 0 4 1113 194 116 23 0 chrX 69258400 69258443 -97391853 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1113 186 378 121 21 chrX 69258536 69258909 -97391387 + L2 LINE L2 2657 3066 -353 4 1113 324 0 0 0 chrX 69258913 69258949 -97391347 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1113 8362 44 3 8 chrX 69259350 69260565 -97389731 - L1Md_F3 LINE L1 -1 6583 5376 4 1113 29891 67 3 9 chrX 69260770 69263130 -97387166 - L1Md_F2 LINE L1 -12 6570 4209 4 1113 288 0 0 0 chrX 69263130 69263162 -97387134 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1113 29891 72 3 14 chrX 69263162 69263843 -97386453 - L1Md_F2 LINE L1 -1675 4208 3573 4 1113 1192 62 0 0 chrX 69263843 69263989 -97386307 - B1_Mus2 SINE Alu -1 146 1 4 1113 29891 72 3 14 chrX 69263989 69265648 -97384648 - L1Md_F2 LINE L1 -2311 3572 1912 4 1113 4538 121 73 8 chrX 69265650 69266808 -97383488 - L1Md_F2 LINE L1 -4448 1435 218 4 1113 273 93 102 9 chrX 69266865 69266973 -97383323 + (TG)n Simple_repeat Simple_repeat 2 119 0 4 1113 429 36 0 0 chrX 69269353 69269408 -97380888 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1113 443 298 26 0 chrX 69269433 69269547 -97380749 - RSINE1 SINE B4 -47 118 2 4 1113 342 0 0 0 chrX 69270413 69270451 -97379845 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1113 1143 271 18 9 chrX 69270477 69270805 -97379491 - L1_Rod LINE L1 -3 5844 5514 4 1113 423 0 0 0 chrX 69270924 69270971 -97379325 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1113 21 57 0 0 chrX 69271346 69271381 -97378915 + AT_rich Low_complexity Low_complexity 1 35 0 4 1113 22 56 0 0 chrX 69271486 69271522 -97378774 + AT_rich Low_complexity Low_complexity 1 36 0 4 1113 276 250 17 35 chrX 69271793 69271909 -97378387 - Lx8 LINE L1 -5 7468 7355 4 1113 10093 79 3 2 chrX 69271928 69273271 -97377025 + L1Md_F2 LINE L1 4241 5584 -299 4 1113 8017 51 6 0 chrX 69273273 69274246 -97376050 + L1Md_F2 LINE L1 5588 6566 -16 4 1113 360 0 0 0 chrX 69274494 69274534 -97375762 + (A)n Simple_repeat Simple_repeat 1 40 0 4 1113 6763 95 71 2 chrX 69274534 69275642 -97374654 + L1_Mus3 LINE L1 5447 6631 -7 4 1113 394 248 120 0 chrX 69275706 69275823 -97374473 - Lx8 LINE L1 -157 7316 7186 4 1113 992 247 4 13 chrX 69275877 69276115 -97374181 + ORR1E-int LTR MaLR 170 405 -1175 4 1113 548 316 70 68 chrX 69276118 69276452 -97373844 + ORR1E-int LTR MaLR 542 803 -777 4 1113 948 291 67 43 chrX 69276501 69276846 -97373450 + ORR1E LTR MaLR 1 353 -6 4 1113 280 357 101 0 chrX 69276852 69276981 -97373315 + MTE-int LTR MaLR 975 1116 -464 4 1113 281 217 205 0 chrX 69277032 69277115 -97373181 + MTE2a LTR MaLR 241 340 -39 4 1113 871 298 50 18 chrX 69277203 69277480 -97372816 + B4A SINE B4 5 290 -2 4 1113 312 91 0 0 chrX 69277540 69277584 -97372712 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1113 193 316 51 38 chrX 69277979 69278058 -97372238 - MIRb SINE MIR -29 239 160 4 1113 391 394 0 0 chrX 69278341 69278483 -97371813 + B1F1 SINE Alu 1 142 -7 4 1113 503 296 12 116 chrX 69278487 69278659 -97371637 + B3A SINE B2 1 154 -44 4 1113 530 67 13 0 chrX 69278659 69278734 -97371562 + (CA)n Simple_repeat Simple_repeat 1 76 0 4 1113 603 271 45 8 chrX 69278967 69279231 -97371065 - L1ME5 LINE L1 -124 6070 5797 4 1113 310 294 28 38 chrX 69279521 69279627 -97370669 - L1M5 LINE L1 -691 5433 5329 4 1113 198 0 0 0 chrX 69279713 69279735 -97370561 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 1113 765 134 0 9 chrX 69279735 69279848 -97370448 - B2_Mm2 SINE B2 -82 113 2 4 1113 3904 254 32 37 chrX 69279881 69281949 -97368347 - Lx5 LINE L1 -14 7036 4981 4 1113 5264 40 0 0 chrX 69281990 69282618 -97367678 - L1Md_T LINE L1 0 6582 5955 4 1113 4814 30 0 2 chrX 69282618 69283219 -97367077 + L1Md_F3 LINE L1 4072 4672 -1211 4 1113 12173 60 1 1 chrX 69283223 69284913 -97365383 + L1_Mm LINE L1 1230 2919 -2964 4 1113 6449 57 1 0 chrX 69284914 69285769 -97364527 + L1Md_F3 LINE L1 4731 5586 -297 4 1113 8250 39 0 3 chrX 69285769 69286777 -97363519 + L1Md_F3 LINE L1 5587 6584 0 4 1113 288 0 0 0 chrX 69286802 69286834 -97363462 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 1113 1439 195 7 0 chrX 69286834 69287131 -97363165 - Lx5 LINE L1 -1065 4812 4514 4 1113 4168 173 42 10 chrX 69287152 69287919 -97362377 - Lx5 LINE L1 -3 7047 6257 4 1113 1110 223 47 13 chrX 69287919 69288219 -97362077 + Lx5 LINE L1 5889 6198 -852 4 1113 4915 159 53 27 chrX 69288254 69289366 -97360930 - Lx5 LINE L1 -1367 4513 3373 4 1113 241 289 106 83 chrX 69289799 69289931 -97360365 - L2b LINE L2 -1 3374 3240 4 1113 921 141 0 0 chrX 69290058 69290200 -97360096 + RMER17B LTR ERVK 813 954 -4 4 1113 379 330 160 21 chrX 69290203 69290540 -97359756 + L2a LINE L2 2661 3044 -375 4 1113 202 344 5 0 chrX 69290778 69290861 -97359435 + L2a LINE L2 3287 3421 -5 4 1113 230 0 33 0 chrX 69290942 69290972 -97359324 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1113 730 257 4 84 chrX 69291113 69291338 -97358958 + B3 SINE B2 1 207 -9 4 1113 25 0 0 0 chrX 69291340 69291365 -97358931 + AT_rich Low_complexity Low_complexity 1 25 0 4 1113 335 76 24 48 chrX 69291450 69291533 -97358763 + (CAAAAA)n Simple_repeat Simple_repeat 1 81 0 4 1113 245 182 18 0 chrX 69291540 69291595 -97358701 + GA-rich Low_complexity Low_complexity 1 56 0 4 1113 1025 52 7 7 chrX 69291719 69291856 -97358440 + B1_Mus2 SINE Alu 6 142 -5 4 1113 507 242 0 0 chrX 69292487 69292578 -97357718 + B1F2 SINE Alu 53 143 -6 4 1113 1088 208 88 77 chrX 69292718 69292782 -97357514 - RLTR40 LTR ERVK -164 653 600 4 1113 198 0 0 0 chrX 69292782 69292804 -97357492 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 1113 713 114 0 9 chrX 69292807 69292922 -97357374 + (TA)n Simple_repeat Simple_repeat 2 115 0 4 1113 1088 208 88 77 chrX 69292922 69293218 -97357078 - RLTR40 LTR ERVK -218 599 286 4 1113 1172 201 23 65 chrX 69293274 69293583 -97356713 - RLTR40 LTR ERVK -520 297 2 4 1113 271 312 46 24 chrX 69297570 69297747 -97352549 - MIR SINE MIR -24 184 6 4 1113 311 294 10 10 chrX 69297986 69298089 -97352207 + GA-rich Low_complexity Low_complexity 2 104 0 4 1113 241 145 97 0 chrX 69298188 69298250 -97352046 - Lx9 LINE L1 -241 7403 7336 4 1113 504 0 0 0 chrX 69298333 69298389 -97351907 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 1113 180 0 0 0 chrX 69298545 69298565 -97351731 + (CCCCAG)n Simple_repeat Simple_repeat 4 23 0 4 1113 832 293 79 14 chrX 69299986 69300277 -97350019 + MLT1B LTR MaLR 73 382 -8 4 1113 392 321 60 24 chrX 69300556 69300722 -97349574 - MLT1B LTR MaLR 0 390 219 4 1113 555 321 0 71 chrX 69300720 69300918 -97349378 - MER2 DNA MER2_type -6 339 156 4 1113 519 235 128 35 chrX 69301340 69301481 -97348815 + ID_B1 SINE B4 39 192 -32 4 1113 395 335 94 31 chrX 69301479 69301670 -97348626 + B4A SINE B4 24 226 -66 4 1113 4409 189 87 39 chrX 69301718 69302634 -97347662 + L1_Rod LINE L1 4293 5235 -612 5 1113 1166 22 0 0 chrX 69302634 69302768 -97347528 + B1_Mm SINE Alu 2 135 -12 5 1113 233 29 29 0 chrX 69302768 69302802 -97347494 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 5 1113 4409 189 87 39 chrX 69302802 69302867 -97347429 + L1_Rod LINE L1 5236 5313 -534 5 1113 309 51 0 0 chrX 69302867 69302906 -97347390 + (CAA)n Simple_repeat Simple_repeat 2 40 0 5 1113 4409 189 87 39 chrX 69302906 69303147 -97347149 + L1_Rod LINE L1 5314 5575 -272 5 1113 1014 214 48 0 chrX 69303148 69303358 -97346938 + URR1B DNA MER1_type 1 220 -5 5 1113 731 187 88 24 chrX 69303392 69303562 -97346734 - ORR1C1 LTR MaLR -30 354 174 5 1113 609 49 0 0 chrX 69303595 69303676 -97346620 + (GA)n Simple_repeat Simple_repeat 2 82 0 5 1113 810 153 0 154 chrX 69303681 69303889 -97346407 - ORR1C1 LTR MaLR -202 176 1 5 1113 235 339 0 0 chrX 69303899 69303958 -97346338 + B4A SINE B4 89 147 -145 5 1113 628 263 35 45 chrX 69304189 69304388 -97345908 - B3A SINE B2 -1 197 1 5 1113 182 250 62 15 chrX 69304858 69304923 -97345373 + MIRc SINE MIR 3 70 -198 5 1113 241 24 23 47 chrX 69305552 69305595 -97344701 + (TCTCTG)n Simple_repeat Simple_repeat 3 44 0 5 1113 25 0 0 0 chrX 69305616 69305641 -97344655 + AT_rich Low_complexity Low_complexity 1 25 0 5 1113 573 55 0 0 chrX 69305651 69305724 -97344572 + (TC)n Simple_repeat Simple_repeat 2 74 0 5 1113 516 362 0 67 chrX 69305951 69306161 -97344135 - ID_B1 SINE B4 -21 203 8 5 1113 252 191 58 14 chrX 69306176 69306245 -97344051 - L1M2 LINE L1 -478 5813 5742 5 1113 493 291 146 35 chrX 69306752 69307013 -97343283 - B4A SINE B4 0 292 3 5 1113 200 189 0 0 chrX 69307981 69308018 -97342278 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1113 32 43 0 0 chrX 69308765 69308811 -97341485 + AT_rich Low_complexity Low_complexity 1 46 0 5 1113 3335 200 72 81 chrX 69309075 69310206 -97340090 + Lx7 LINE L1 4097 5217 -663 5 1113 1133 188 67 18 chrX 69310223 69310532 -97339764 - ORR1C1 LTR MaLR 0 378 1 5 1113 2723 204 51 20 chrX 69310532 69311428 -97338868 + Lx7 LINE L1 5216 6161 -1535 5 1113 9171 41 4 1 chrX 69311750 69313627 -97336669 - L1Md_F3 LINE L1 -14 6570 4689 5 1113 3535 270 63 22 chrX 69314361 69315472 -97334824 + Lx7 LINE L1 6152 7312 -384 5 1113 342 0 0 0 chrX 69315472 69315510 -97334786 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1113 3535 270 63 22 chrX 69315510 69315582 -97334714 + Lx7 LINE L1 7313 7384 -312 5 1113 2385 153 13 3 chrX 69315603 69315990 -97334306 - ORR1B1 LTR MaLR 0 394 4 5 1113 3155 146 122 18 chrX 69315992 69316889 -97333407 - ORR1B1-int LTR MaLR -191 1772 380 5 1113 1327 134 0 56 chrX 69316890 69317142 -97333154 - Lx2 LINE L1 0 6997 6760 5 1113 1524 276 47 71 chrX 69317142 69317735 -97332561 - RLTR17 LTR ERVK -9 683 105 5 1113 3474 210 50 3 chrX 69317742 69318643 -97331653 - ORR1A4-int LTR MaLR -929 1034 1 5 1113 310 203 0 0 chrX 69318643 69318702 -97331594 - ORR1A4 LTR MaLR 0 329 271 5 1113 6500 58 21 1 chrX 69318710 69319579 -97330717 - L1_Mus1 LINE L1 -1 6566 5681 5 1113 624 133 38 0 chrX 69319564 69319669 -97330627 + L1_Mus1 LINE L1 5550 5658 -225 5 1113 2070 191 14 8 chrX 69319669 69320027 -97330269 - ORR1B1 LTR MaLR -33 361 2 5 1113 292 247 0 0 chrX 69320081 69320162 -97330134 + Lx7 LINE L1 7598 7678 -18 5 1113 1210 294 116 32 chrX 69320929 69321834 -97328462 - L1MC3 LINE L1 -103 7682 6702 5 1113 196 355 62 18 chrX 69322042 69322154 -97328142 + L2 LINE L2 2529 2645 -774 5 1113 757 308 69 28 chrX 69322474 69323079 -97327217 + L1M4 LINE L1 4617 5246 -900 5 1113 31 0 0 0 chrX 69323759 69323790 -97326506 + AT_rich Low_complexity Low_complexity 1 31 0 5 1113 246 175 70 0 chrX 69323912 69323969 -97326327 + (TCTG)n Simple_repeat Simple_repeat 2 62 0 5 1113 1414 274 60 27 chrX 69324052 69324588 -97325708 - Lx6 LINE L1 -27 7433 6507 5 1113 39493 5 0 1 chrX 69324680 69331464 -97318832 - L1Md_A LINE L1 0 6582 1 5 1113 420 235 149 16 chrX 69331476 69331597 -97318699 - B1_Mur3 SINE Alu -8 141 5 5 1113 420 20 0 0 chrX 69331833 69331882 -97318414 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 1113 702 34 0 0 chrX 69331882 69331970 -97318326 + (TG)n Simple_repeat Simple_repeat 2 90 0 5 1113 747 177 0 31 chrX 69332652 69332780 -97317516 + B1_Mur3 SINE Alu 15 138 -11 5 1113 240 59 0 0 chrX 69332780 69332814 -97317482 + (CCA)n Simple_repeat Simple_repeat 1 34 0 5 1113 607 321 145 17 chrX 69332916 69333022 -97317274 + MT2A LTR ERVL 128 244 -289 5 1113 342 0 0 0 chrX 69333022 69333060 -97317236 + (CTG)n Simple_repeat Simple_repeat 1 38 0 5 1113 607 321 145 17 chrX 69333060 69333305 -97316991 + MT2A LTR ERVL 245 524 -9 5 1113 2149 168 11 22 chrX 69333331 69333734 -97316562 + ORR1B1 LTR MaLR 1 346 -48 5 1113 4164 158 9 3 chrX 69333734 69334472 -97315824 + L1_Mur2 LINE L1 4422 5164 -713 5 1113 428 167 54 67 chrX 69334472 69334663 -97315633 + ORR1B2 LTR MaLR 186 386 -8 5 1113 929 150 171 0 chrX 69336885 69337078 -97313218 + URR1A DNA MER1_type 1 226 0 5 1114 389 284 161 0 chrX 69338655 69338866 -97311430 - MIRc SINE MIR -6 262 18 5 1114 944 266 29 21 chrX 69339002 69339240 -97311056 - B4 SINE B4 -52 240 1 5 1114 315 156 118 59 chrX 69339338 69339406 -97310890 - ID4_ SINE ID -9 74 3 5 1114 265 309 12 0 chrX 69339903 69339984 -97310312 + MIR SINE MIR 95 176 -86 5 1114 563 252 0 18 chrX 69341430 69341596 -97308700 + L1VL4 LINE L1 191 353 -5949 5 1114 2134 77 6 0 chrX 69341605 69341917 -97308379 + MusHAL1 LINE L1 541 854 -1858 5 1114 1728 225 72 141 chrX 69341917 69342512 -97307784 - RLTR1D LTR ERV1 0 605 52 5 1114 2144 82 3 0 chrX 69342549 69342865 -97307431 + MusHAL1 LINE L1 866 1182 -1530 5 1114 4645 118 16 12 chrX 69342873 69343079 -97307217 + L1_Mm LINE L1 5077 5282 -601 5 1114 6245 64 9 0 chrX 69343079 69343875 -97306421 + L1Md_T LINE L1 5778 6580 -2 5 1114 4645 118 16 12 chrX 69343875 69344422 -97305874 + L1_Mm LINE L1 5283 5832 -51 5 1114 6762 91 36 14 chrX 69344415 69345454 -97304842 + Lx LINE L1 5587 6648 -6 5 1114 22 35 0 0 chrX 69346027 69346056 -97304240 + AT_rich Low_complexity Low_complexity 1 29 0 5 1114 36204 32 0 0 chrX 69346091 69352724 -97297572 - L1Md_T LINE L1 0 6585 2 5 1114 316 344 127 64 chrX 69353506 69353820 -97296476 + L2b LINE L2 3004 3337 -50 5 1114 22 0 0 0 chrX 69353871 69353893 -97296403 + AT_rich Low_complexity Low_complexity 1 22 0 5 1114 483 270 6 44 chrX 69354143 69354164 -97296132 + ID_B1 SINE B4 70 195 -29 5 1114 730 190 14 7 chrX 69354164 69354271 -97296025 + B1_Mur4 SINE Alu 12 118 -32 5 1114 239 0 32 0 chrX 69354271 69354302 -97295994 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 5 1114 483 270 6 44 chrX 69354302 69354332 -97295964 + ID_B1 SINE B4 196 221 -3 5 1114 773 259 35 10 chrX 69354423 69354626 -97295670 - B3 SINE B2 -6 210 3 5 1114 237 321 0 0 chrX 69354691 69354772 -97295524 - L1_Mur2 LINE L1 -1344 4533 4453 5 1114 1197 47 0 0 chrX 69354773 69354921 -97295375 - L1_Mus1 LINE L1 -3 6564 6417 5 1114 243 298 0 0 chrX 69355451 69355508 -97294788 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1114 804 251 56 8 chrX 69356622 69356943 -97293353 + L1M2 LINE L1 5076 5412 -768 5 1114 688 265 119 37 chrX 69356975 69357430 -97292866 - L1MA7 LINE L1 -38 6253 5762 5 1114 250 160 53 13 chrX 69357776 69357852 -97292444 + A-rich Low_complexity Low_complexity 2 80 0 5 1114 1710 253 13 9 chrX 69357883 69358330 -97291966 - Lx7 LINE L1 -412 7284 6836 5 1114 511 267 22 30 chrX 69358397 69358532 -97291764 - B1F SINE Alu -9 140 7 5 1114 591 323 12 24 chrX 69358688 69358853 -97291443 + RSINE1 SINE B4 3 165 0 5 1114 299 247 32 0 chrX 69359014 69359107 -97291189 + Lx7 LINE L1 7585 7680 -16 5 1114 1020 227 5 18 chrX 69359116 69359336 -97290960 + Lx6 LINE L1 7068 7284 -176 5 1114 435 38 0 0 chrX 69359416 69359469 -97290827 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1114 677 288 23 12 chrX 69359469 69359566 -97290730 + RLTR18B LTR ERVK 17 114 -398 5 1114 483 18 0 0 chrX 69359566 69359622 -97290674 + (TAA)n Simple_repeat Simple_repeat 2 57 0 5 1114 677 288 23 12 chrX 69359622 69359696 -97290600 + RLTR18B LTR ERVK 115 190 -322 5 1114 640 197 6 27 chrX 69359744 69359927 -97290369 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 1114 6269 60 57 0 chrX 69360009 69360876 -97289420 - L1_Mus2 LINE L1 0 6566 5651 5 1114 2678 116 2 27 chrX 69360876 69361327 -97288969 - L1_Mm LINE L1 -723 5160 4721 5 1114 394 151 23 11 chrX 69362052 69362139 -97288157 + C-rich Low_complexity Low_complexity 5 92 0 5 1114 601 291 7 0 chrX 69362571 69362712 -97287584 - B1F SINE Alu -7 142 1 5 1114 542 267 155 15 chrX 69362934 69363191 -97287105 + MTEb LTR MaLR 86 378 -1 5 1114 462 338 96 18 chrX 69363812 69364155 -97286141 - L1ME4a LINE L1 -54 6070 5701 5 1114 198 0 0 0 chrX 69364411 69364433 -97285863 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 1114 198 286 0 0 chrX 69364834 69364876 -97285420 - MIRb SINE MIR -16 252 211 5 1114 229 359 129 30 chrX 69364964 69365096 -97285200 - L2a LINE L2 -230 3196 3052 5 1114 606 321 119 27 chrX 69365673 69366059 -97284237 - MLT1E3 LTR MaLR -163 464 46 5 1114 207 0 0 0 chrX 69367093 69367116 -97283180 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 5 1114 2584 107 25 20 chrX 69367430 69367831 -97282465 - Lx LINE L1 0 6654 6252 5 1114 39455 5 0 0 chrX 69368102 69374206 -97276090 - L1Md_A LINE L1 -33 6549 445 5 1114 3482 20 3 0 chrX 69374206 69374598 -97275698 - MTA_Mm LTR MaLR -3 393 1 5 1114 9603 16 2 0 chrX 69374598 69375692 -97274604 - MTA_Mm-int LTR MaLR 0 1098 3 5 1114 4409 16 0 0 chrX 69375696 69376189 -97274107 - MT2_Mm LTR ERVL 0 493 1 5 1114 318 362 11 0 chrX 69376368 69376462 -97273834 - ID_B1 SINE B4 -128 96 2 5 1114 1105 192 77 0 chrX 69376807 69377041 -97273255 - Lx5 LINE L1 -109 6941 6690 5 1114 3468 162 51 5 chrX 69377036 69377701 -97272595 + Lx5 LINE L1 5746 6441 -609 5 1114 249 259 57 34 chrX 69377841 69377929 -97272367 + MTEb LTR MaLR 278 367 -12 5 1114 21 36 0 0 chrX 69378607 69378635 -97271661 + AT_rich Low_complexity Low_complexity 1 28 0 5 1114 255 322 67 0 chrX 69378981 69379071 -97271225 + ORR1E LTR MaLR 1 96 -263 6 1114 1853 189 16 37 chrX 69379120 69379494 -97270802 - ORR1D1 LTR MaLR 0 374 9 6 1114 436 294 16 40 chrX 69379956 69380080 -97270216 + MER45A DNA Tip100 58 178 0 6 1114 370 327 55 9 chrX 69381018 69381477 -97268819 + L1MA4 LINE L1 2336 2815 -4034 6 1114 1708 230 32 25 chrX 69381650 69382055 -97268241 + MTD LTR MaLR 12 419 0 6 1114 436 328 57 36 chrX 69382136 69382769 -97267527 + L1MA4 LINE L1 3339 3984 -2861 6 1114 310 308 7 77 chrX 69382876 69383031 -97267265 + L1MA4 LINE L1 6279 6422 -571 6 1114 825 322 17 46 chrX 69383049 69383465 -97266831 + Lx7 LINE L1 6529 6932 -764 6 1114 27 49 0 0 chrX 69383543 69383584 -97266712 + AT_rich Low_complexity Low_complexity 1 41 0 6 1114 261 285 35 49 chrX 69383617 69383761 -97266535 + L1MA4 LINE L1 6484 6625 -377 6 1114 1023 259 66 63 chrX 69383881 69384198 -97266098 - MTE2a LTR MaLR 0 379 62 6 1114 249 98 0 0 chrX 69384216 69384257 -97266039 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 6 1114 3477 177 141 48 chrX 69384365 69384519 -97265777 - RMER19B LTR ERVK -2 900 765 6 1114 219 36 0 0 chrX 69384519 69384547 -97265749 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 6 1114 3477 177 141 48 chrX 69384547 69385216 -97265080 - RMER19B LTR ERVK -138 764 1 6 1114 192 40 0 0 chrX 69386608 69386633 -97263663 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 1114 508 252 17 0 chrX 69387628 69387743 -97262553 + B1_Mur1 SINE Alu 33 149 0 6 1114 762 122 0 26 chrX 69387743 69387894 -97262402 + (GAAA)n Simple_repeat Simple_repeat 4 150 0 6 1114 34110 42 1 3 chrX 69389140 69394391 -97255905 + L1Md_T LINE L1 256 5589 -297 6 1114 8555 29 0 0 chrX 69394391 69395387 -97254909 + L1Md_T LINE L1 5590 6585 0 6 1114 2923 100 12 0 chrX 69395577 69396154 -97254142 + Lx2 LINE L1 5427 6010 -987 6 1114 1656 72 0 0 chrX 69396152 69396387 -97253909 - L1_Mur1 LINE L1 -1732 4154 3920 6 1114 5547 107 1 87 chrX 69396412 69397367 -97252929 + L1Md_F2 LINE L1 5709 6581 -1 6 1114 6427 96 45 1 chrX 69397592 69398520 -97251776 + Lx3_Mus LINE L1 6030 6998 -11 6 1114 4077 113 5 12 chrX 69398539 69399190 -97251106 + Lx2 LINE L1 6000 6645 -352 6 1114 1152 143 67 0 chrX 69399188 69399397 -97250899 + Lx2 LINE L1 6775 6997 0 6 1114 1995 151 70 22 chrX 69399780 69400138 -97250158 + ORR1B1 LTR MaLR 12 386 -8 6 1114 212 243 54 54 chrX 69400190 69400264 -97250032 - L2 LINE L2 -1683 1736 1663 6 1114 246 233 17 0 chrX 69401303 69401363 -97248933 + (ATG)n Simple_repeat Simple_repeat 2 62 0 6 1114 711 242 90 15 chrX 69401363 69401564 -97248732 - MTEb LTR MaLR 0 379 164 6 1114 1036 197 8 79 chrX 69401592 69401846 -97248450 - Lx5 LINE L1 -38 7012 6777 6 1114 655 301 0 12 chrX 69401851 69402019 -97248277 - MTEb LTR MaLR -208 171 6 6 1114 256 316 104 15 chrX 69402528 69402663 -97247633 - B1F1 SINE Alu -2 147 1 6 1114 458 119 40 0 chrX 69402832 69402933 -97247363 - L1Md_T LINE L1 -8 6574 6470 6 1114 406 269 115 17 chrX 69403212 69403570 -97246726 + Charlie4a DNA MER1_type 51 463 -45 6 1114 482 354 30 10 chrX 69404291 69404491 -97245805 + MIR SINE MIR 15 218 -44 6 1114 212 316 20 10 chrX 69405426 69405525 -97244771 + CT-rich Low_complexity Low_complexity 4 103 0 6 1114 181 309 118 76 chrX 69406385 69406504 -97243792 - MIRb SINE MIR -125 143 20 6 1114 381 340 27 7 chrX 69406876 69407024 -97243272 - ORR1E LTR MaLR -175 184 34 6 1114 537 279 14 0 chrX 69407023 69407163 -97243133 + Charlie10a DNA MER1_type 87 228 -52 6 1114 277 373 23 16 chrX 69407345 69407473 -97242823 - MIR SINE MIR -103 159 31 6 1114 279 0 0 0 chrX 69408221 69408252 -97242044 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1114 3293 48 9 9 chrX 69408252 69408665 -97241631 + L1Md_F2 LINE L1 6168 6581 -1 6 1114 221 0 35 0 chrX 69408686 69408715 -97241581 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 6 1114 405 0 0 0 chrX 69408877 69408922 -97241374 + (TA)n Simple_repeat Simple_repeat 1 45 0 6 1114 232 233 27 14 chrX 69409035 69409109 -97241187 + (CATATA)n Simple_repeat Simple_repeat 3 77 0 6 1114 386 290 12 0 chrX 69409376 69409545 -97240751 + L1M5 LINE L1 2344 2514 -3632 6 1114 1679 301 21 14 chrX 69409719 69410298 -97239998 - Lx7 LINE L1 -375 7321 6739 6 1114 1081 288 7 0 chrX 69410294 69410582 -97239714 - Lx7 LINE L1 -1195 6501 6212 6 1114 185 203 15 92 chrX 69410597 69410662 -97239634 - L3 LINE CR1 -1926 2563 2504 6 1114 470 207 23 0 chrX 69411149 69411323 -97238973 + GA-rich Low_complexity Low_complexity 1 178 0 6 1114 478 260 39 54 chrX 69411344 69411474 -97238822 + B1F SINE Alu 21 148 -1 6 1114 675 304 68 29 chrX 69411502 69412020 -97238276 + L1M5 LINE L1 3401 3938 -2208 6 1114 30 59 0 0 chrX 69412030 69412081 -97238215 + AT_rich Low_complexity Low_complexity 1 51 0 6 1114 3381 242 145 24 chrX 69412120 69412881 -97237415 + Lx6 LINE L1 6273 7114 -346 6 1114 450 0 0 0 chrX 69412881 69412931 -97237365 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1114 3381 242 145 24 chrX 69412931 69413202 -97237094 + Lx6 LINE L1 7115 7430 -30 6 1114 335 270 41 92 chrX 69413366 69413464 -97236832 - PB1D10 SINE Alu -29 120 28 6 1114 201 39 0 0 chrX 69413466 69413492 -97236804 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 1114 604 254 42 16 chrX 69413561 69413753 -97236543 + L1M2 LINE L1 5374 5570 -730 6 1114 243 0 0 0 chrX 69414339 69414366 -97235930 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 1114 253 283 0 16 chrX 69414731 69414792 -97235504 - L2b LINE L2 -3 3372 3313 6 1114 344 228 32 57 chrX 69416765 69416923 -97233373 - L1MB5 LINE L1 -278 5896 5743 6 1114 189 366 53 9 chrX 69417014 69417127 -97233169 - L2b LINE L2 -92 3295 3178 6 1114 346 202 34 56 chrX 69417633 69417722 -97232574 + MT2B LTR ERVL 178 264 -337 6 1114 878 18 0 26 chrX 69417646 69417753 -97232543 + B1_Mm SINE Alu 37 141 -6 6 1114 225 65 0 0 chrX 69417753 69417784 -97232512 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1114 245 313 110 37 chrX 69418629 69418765 -97231531 + L2 LINE L2 2700 2845 -574 6 1114 258 325 24 0 chrX 69418844 69418927 -97231369 - MIR SINE MIR -105 157 73 6 1114 252 0 0 0 chrX 69419061 69419089 -97231207 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 6 1114 415 325 46 125 chrX 69419231 69419555 -97230741 + ORR1E LTR MaLR 44 370 0 6 1114 354 302 171 23 chrX 69419683 69419947 -97230349 - L1MC3 LINE L1 -1839 5946 5644 6 1114 256 321 102 0 chrX 69420385 69420678 -97229618 - L1MC3 LINE L1 -1538 4608 4286 6 1114 727 331 71 23 chrX 69420678 69421130 -97229166 - MLT1D LTR MaLR 0 505 1 6 1114 667 246 81 10 chrX 69421171 69421368 -97228928 - B3 SINE B2 -3 213 3 6 1114 234 208 0 0 chrX 69421558 69421611 -97228685 - L1MC3 LINE L1 -2319 3827 3775 6 1114 3798 126 19 7 chrX 69421878 69422456 -97227840 - Lx LINE L1 -7 6647 6063 6 1114 195 42 0 0 chrX 69422461 69422485 -97227811 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1114 1077 101 0 0 chrX 69422489 69422637 -97227659 - B1_Mus1 SINE Alu 0 148 1 6 1114 15916 61 7 8 chrX 69422655 69425506 -97224790 - L1Md_F2 LINE L1 -12 6570 3717 6 1114 20028 47 3 7 chrX 69425509 69428964 -97221332 - L1Md_T LINE L1 0 6582 3144 6 1114 567 43 0 0 chrX 69428964 69429034 -97221262 + (TTC)n Simple_repeat Simple_repeat 3 72 0 6 1114 819 9 9 18 chrX 69429040 69429154 -97221142 - L1Md_F2 LINE L1 -15 6567 6455 6 1114 1028 32 0 0 chrX 69429154 69429278 -97221018 + L1Md_F2 LINE L1 6265 6388 -194 6 1114 227 33 0 0 chrX 69429277 69429307 -97220989 - L1Md_T LINE L1 -2733 3150 3121 6 1114 840 264 5 9 chrX 69429310 69429528 -97220768 - Lx6 LINE L1 -56 7404 7188 6 1114 3459 154 32 76 chrX 69429532 69430285 -97220011 + Lx4B LINE L1 4960 5679 -198 6 1114 949 86 0 0 chrX 69430300 69430428 -97219868 - B1_Mus1 SINE Alu -1 147 20 6 1114 1677 124 4 4 chrX 69430438 69430706 -97219590 + Lx4B LINE L1 5674 5941 -1117 6 1114 1156 225 46 35 chrX 69430705 69430990 -97219306 + Lx5 LINE L1 6760 7047 -3 6 1114 1769 291 92 104 chrX 69431030 69431966 -97218330 - Lx5 LINE L1 -243 6807 5883 6 1114 2657 163 32 15 chrX 69431990 69432166 -97218130 + L1_Mur3 LINE L1 1490 1667 -4213 6 1114 3027 23 3 0 chrX 69432166 69432511 -97217785 - ORR1A0 LTR MaLR 0 346 1 6 1114 2657 163 32 15 chrX 69432511 69432927 -97217369 + L1_Mur3 LINE L1 1668 2092 -3788 6 1114 292 239 88 64 chrX 69432943 69433068 -97217228 - Lx7 LINE L1 -4 7692 7565 6 1114 306 270 55 8 chrX 69433135 69433262 -97217034 - L1MA4 LINE L1 -410 5890 5758 6 1114 489 294 27 20 chrX 69433264 69433410 -97216886 - B1F SINE Alu -2 147 1 6 1114 2323 186 94 53 chrX 69434720 69435096 -97215200 + RLTR31A_Mm LTR ERVK 1 405 -179 6 1114 3410 28 5 0 chrX 69435096 69435490 -97214806 - MTA_Mm LTR MaLR 0 396 1 6 1114 9402 27 1 0 chrX 69435490 69436587 -97213709 - MTA_Mm-int LTR MaLR 0 1098 1 6 1114 3255 26 39 0 chrX 69436587 69436968 -97213328 - MTA_Mm LTR MaLR 0 396 1 6 1114 9402 27 1 0 chrX 69436968 69438065 -97212231 - MTA_Mm-int LTR MaLR 0 1098 1 6 1114 3236 31 39 0 chrX 69438065 69438446 -97211850 - MTA_Mm LTR MaLR 0 396 1 6 1114 2323 186 94 53 chrX 69438446 69438626 -97211670 + RLTR31A_Mm LTR ERVK 406 580 -4 6 1114 959 262 13 19 chrX 69438660 69438975 -97211321 - Lx7 LINE L1 -1793 5903 5591 6 1114 2997 116 19 33 chrX 69439073 69439555 -97210741 + MT2C_Mm LTR ERVL 1 475 0 6 1114 226 241 0 25 chrX 69440355 69440436 -97209860 + (AATTG)n Simple_repeat Simple_repeat 5 83 0 6 1114 395 290 66 57 chrX 69440482 69440694 -97209602 + L1MEc LINE L1 111 324 -6076 6 1114 434 258 64 40 chrX 69440837 69440962 -97209334 + ID_B1 SINE B4 77 204 -20 6 1114 1022 70 14 0 chrX 69440962 69441105 -97209191 + (CATA)n Simple_repeat Simple_repeat 1 145 0 6 1114 1221 270 32 38 chrX 69441118 69441461 -97208835 + ORR1D1 LTR MaLR 1 341 -33 6 1114 1399 191 173 61 chrX 69441457 69441998 -97208298 - RMER20B LTR ERVK -25 602 1 6 1114 43 64 0 0 chrX 69442236 69442314 -97207982 + AT_rich Low_complexity Low_complexity 1 78 0 6 1114 279 0 0 0 chrX 69442407 69442438 -97207858 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1114 315 0 0 0 chrX 69442438 69442472 -97207824 + (GA)n Simple_repeat Simple_repeat 2 36 0 6 1114 226 247 0 56 chrX 69442645 69442735 -97207561 + L1MEc LINE L1 1645 1729 -4686 6 1114 290 294 82 16 chrX 69442879 69443062 -97207234 + L1MEc LINE L1 2218 2412 -3988 6 1114 413 298 76 0 chrX 69443152 69443323 -97206973 - Lx8 LINE L1 -281 7192 7009 6 1114 252 122 0 0 chrX 69443481 69443522 -97206774 + (TA)n Simple_repeat Simple_repeat 1 41 0 6 1114 1154 98 11 0 chrX 69443531 69443705 -97206591 + (TATATG)n Simple_repeat Simple_repeat 2 177 0 6 1114 2204 117 12 12 chrX 69443710 69444039 -97206257 + ORR1A4 LTR MaLR 1 329 0 6 1114 783 127 134 0 chrX 69444039 69444196 -97206100 + ORR1A4-int LTR MaLR 1 178 -1785 6 1114 491 291 65 45 chrX 69444192 69444347 -97205949 - RSINE1 SINE B4 0 165 8 6 1114 519 263 225 5 chrX 69444351 69444538 -97205758 - B4 SINE B4 -64 228 1 6 1114 356 182 36 200 chrX 69444550 69444660 -97205636 - ID_B1 SINE B4 -9 215 124 6 1114 3199 127 132 15 chrX 69444661 69445198 -97205098 - MT2B LTR ERVL -1 600 1 6 1114 275 178 13 52 chrX 69445236 69445313 -97204983 - ORR1A3-int LTR MaLR -1323 640 567 6 1114 594 119 30 0 chrX 69445360 69445461 -97204835 - MERVL_2A-int LTR ERVL -289 5472 5369 7 1114 1608 82 0 0 chrX 69445461 69445680 -97204616 + ORR1A3-int LTR MaLR 1380 1598 -365 7 1114 4598 211 44 7 chrX 69445683 69446893 -97203403 - Lx5 LINE L1 -29 7029 5727 7 1114 1604 289 24 12 chrX 69446957 69447450 -97202846 + Lx8 LINE L1 6211 6709 -764 7 1114 1099 264 135 27 chrX 69447474 69447956 -97202340 + Lx8 LINE L1 6938 7471 -2 7 1114 225 241 0 49 chrX 69448123 69448184 -97202112 - RLTR13B2 LTR ERVK -520 302 245 7 1114 562 209 51 22 chrX 69448279 69448416 -97201880 + MTE2a LTR MaLR 239 379 0 7 1114 200 125 25 0 chrX 69449263 69449303 -97200993 + (CAAAA)n Simple_repeat Simple_repeat 4 44 0 7 1114 862 113 14 0 chrX 69449317 69449459 -97200837 + (GAA)n Simple_repeat Simple_repeat 2 145 0 7 1114 378 0 0 0 chrX 69449751 69449793 -97200503 + (TC)n Simple_repeat Simple_repeat 1 42 0 7 1114 333 0 0 0 chrX 69449793 69449829 -97200467 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1114 287 247 34 41 chrX 69449848 69449945 -97200351 - PB1D10 SINE Alu 0 117 21 7 1114 21 0 0 0 chrX 69449945 69449966 -97200330 + AT_rich Low_complexity Low_complexity 1 21 0 7 1114 346 209 0 29 chrX 69450105 69450174 -97200122 - B1_Mur1 SINE Alu 0 149 83 7 1114 252 308 0 0 chrX 69450227 69450292 -97200004 - ID4 SINE ID -13 70 6 7 1114 339 336 99 9 chrX 69450552 69450663 -97199633 + B1F1 SINE Alu 21 141 -8 7 1114 183 246 0 0 chrX 69451541 69451598 -97198698 + GA-rich Low_complexity Low_complexity 2 58 0 7 1114 656 335 17 11 chrX 69452465 69452643 -97197653 + B3 SINE B2 1 179 -37 7 1114 543 43 0 0 chrX 69452647 69452717 -97197579 + (CA)n Simple_repeat Simple_repeat 2 71 0 7 1114 4423 93 2 7 chrX 69453155 69453801 -97196495 + L1_Mus4 LINE L1 5768 6397 -239 7 1114 244 218 0 49 chrX 69453787 69453869 -97196427 + Lx2 LINE L1 6919 6996 -1 7 1114 223 174 0 0 chrX 69453880 69453926 -97196370 + A-rich Low_complexity Low_complexity 2 47 0 7 1114 533 15 15 0 chrX 69454106 69454172 -97196124 + (TTCC)n Simple_repeat Simple_repeat 2 68 0 7 1114 2782 216 45 28 chrX 69454378 69455089 -97195207 + L1_Mur3 LINE L1 56 778 -6950 7 1114 442 255 76 58 chrX 69455089 69455314 -97194982 + RLTR11B LTR ERVK 1 229 -224 7 1114 484 95 14 0 chrX 69455314 69455388 -97194908 - L1_Mur3 LINE L1 -6878 834 760 7 1114 231 295 111 42 chrX 69455437 69455653 -97194643 - RLTR12A LTR ERVK -38 530 300 7 1114 477 0 0 0 chrX 69455719 69455772 -97194524 + (TC)n Simple_repeat Simple_repeat 1 53 0 7 1114 730 197 15 104 chrX 69455791 69456051 -97194245 + Lx7 LINE L1 7378 7614 -82 7 1114 793 47 0 28 chrX 69456052 69456161 -97194135 + B1_Mus2 SINE Alu 42 147 0 7 1114 502 155 19 0 chrX 69456193 69456296 -97194000 + Lx6 LINE L1 7356 7460 0 7 1114 248 234 126 14 chrX 69456932 69457075 -97193221 - Lx9 LINE L1 -9 7635 7477 7 1114 1118 236 83 34 chrX 69457114 69457508 -97192788 + L1_Mur3 LINE L1 5231 5657 -223 7 1114 423 191 43 0 chrX 69457504 69457598 -97192698 - Lx6 LINE L1 -617 6843 6746 7 1114 318 276 57 0 chrX 69457619 69457742 -97192554 - Lx9 LINE L1 -661 6983 6854 7 1114 394 238 12 0 chrX 69457751 69457835 -97192461 + Lx9 LINE L1 6765 6849 -795 7 1114 1385 76 16 0 chrX 69457932 69458117 -97192179 - B2_Mm2 SINE B2 -7 188 1 7 1114 296 294 146 16 chrX 69458281 69458596 -97191700 - L1MC LINE L1 -2284 3862 3507 7 1114 278 291 105 57 chrX 69458640 69459295 -97191001 - L1MC LINE L1 -2802 3344 2658 7 1114 312 273 109 43 chrX 69459502 69459640 -97190656 - L1M4 LINE L1 -3754 2392 2246 7 1114 5889 108 60 0 chrX 69459662 69460547 -97189749 + Lx2 LINE L1 6059 6996 -1 7 1114 220 383 0 0 chrX 69460816 69460897 -97189399 - ID4_ SINE ID 0 83 3 7 1114 1657 52 0 27 chrX 69461027 69461246 -97189050 - L1_Mus1 LINE L1 -2 6565 6353 7 1114 432 0 0 0 chrX 69462963 69463011 -97187285 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1114 209 21 102 20 chrX 69463902 69463951 -97186345 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 7 1115 189 0 0 0 chrX 69468727 69468748 -97181548 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 7 1115 248 253 181 0 chrX 69469038 69469121 -97181175 + B3 SINE B2 73 170 -46 7 1115 5419 236 69 25 chrX 69469137 69469430 -97180866 + Lx6 LINE L1 5880 6185 -1275 7 1115 1423 155 129 14 chrX 69469430 69469725 -97180571 + ORR1A4 LTR MaLR 1 329 0 7 1115 5419 236 69 25 chrX 69469725 69470280 -97180016 + Lx6 LINE L1 6186 6769 -691 7 1115 3028 31 0 3 chrX 69470280 69470641 -97179655 - L1Md_T LINE L1 -1 6581 6222 7 1115 5419 236 69 25 chrX 69470641 69470990 -97179306 + Lx6 LINE L1 6770 7127 -333 7 1115 3009 136 185 7 chrX 69470990 69471574 -97178722 - RMER6C LTR ERVK -2 688 1 7 1115 5419 236 69 25 chrX 69471574 69471873 -97178423 + Lx6 LINE L1 7128 7445 -15 7 1115 32 57 0 0 chrX 69471980 69472033 -97178263 + AT_rich Low_complexity Low_complexity 1 53 0 7 1115 2512 172 7 7 chrX 69472349 69472770 -97177526 + MTC LTR MaLR 1 421 0 7 1115 280 280 58 17 chrX 69473519 69473639 -97176657 - RMER15-int LTR ERVL -3358 1641 1517 7 1115 258 277 48 19 chrX 69474055 69474158 -97176138 - RMER15 LTR ERVL -48 527 422 7 1115 254 36 53 35 chrX 69475735 69475792 -97174504 + (TTTG)n Simple_repeat Simple_repeat 1 58 0 7 1115 1215 54 0 0 chrX 69475793 69475940 -97174356 - B1_Mus2 SINE Alu 0 147 1 7 1115 210 71 0 0 chrX 69476206 69476234 -97174062 + (CAGG)n Simple_repeat Simple_repeat 2 29 0 7 1115 390 322 0 57 chrX 69477263 69477385 -97172911 + PB1D10 SINE Alu 3 117 0 7 1115 207 0 0 0 chrX 69478268 69478291 -97172005 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 7 1115 613 299 9 33 chrX 69478291 69478505 -97171791 - Lx5 LINE L1 -20 7030 6822 7 1115 22 0 0 0 chrX 69478679 69478701 -97171595 + AT_rich Low_complexity Low_complexity 1 22 0 7 1115 1250 63 8 6 chrX 69478890 69479068 -97171228 + B2_Mm1a SINE B2 1 181 -35 7 1115 225 0 0 0 chrX 69479070 69479095 -97171201 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 7 1115 291 239 56 0 chrX 69480006 69480077 -97170219 + MLT1D LTR MaLR 18 92 -413 7 1115 508 301 56 19 chrX 69480108 69480592 -97169704 + L1M2 LINE L1 3001 3502 -2641 7 1115 6945 72 29 6 chrX 69480593 69481912 -97168384 + L1_Mus2 LINE L1 5220 6556 -10 7 1115 432 0 0 0 chrX 69481912 69481960 -97168336 + (TAA)n Simple_repeat Simple_repeat 1 48 0 7 1115 348 268 47 41 chrX 69481988 69482192 -97168104 + L1M2 LINE L1 3493 3743 -2400 7 1115 630 258 136 53 chrX 69482591 69482911 -97167385 + MTD LTR MaLR 1 371 -48 7 1115 287 313 79 90 chrX 69483053 69483300 -97166996 - ID_B1 SINE B4 -11 281 26 7 1115 1281 215 45 17 chrX 69483300 69483704 -97166592 - Lx4B LINE L1 0 7058 6534 7 1115 8606 146 39 24 chrX 69483705 69485446 -97164850 + L1_Mur2 LINE L1 2003 3769 -2108 7 1115 1175 209 108 20 chrX 69485535 69485803 -97164493 - RMER19C LTR ERVK 0 611 332 7 1115 189 94 0 0 chrX 69485879 69485911 -97164385 + (TTTTTA)n Simple_repeat Simple_repeat 4 35 0 7 1115 3364 68 50 9 chrX 69485911 69486373 -97163923 - LTRIS2 LTR ERV1 -79 485 5 7 1115 680 273 40 27 chrX 69486559 69486860 -97163436 - L1MEc LINE L1 -5545 855 551 7 1115 357 351 17 23 chrX 69486979 69487151 -97163145 - L1MEc LINE L1 -6146 254 84 7 1115 284 208 0 0 chrX 69487292 69487340 -97162956 + B3A SINE B2 24 71 -127 7 1115 507 107 0 0 chrX 69487444 69487519 -97162777 + (CA)n Simple_repeat Simple_repeat 2 76 0 7 1115 1538 128 33 8 chrX 69488183 69488428 -97161868 - L1_Mus1 LINE L1 -13 6554 6304 7 1115 376 107 12 4 chrX 69488428 69488510 -97161786 + L1_Mus1 LINE L1 6242 6296 -271 7 1115 189 121 0 0 chrX 69488707 69488740 -97161556 + (TA)n Simple_repeat Simple_repeat 1 33 0 7 1115 324 0 0 0 chrX 69489659 69489695 -97160601 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1115 225 259 19 0 chrX 69489840 69489894 -97160402 + L2a LINE L2 2688 2742 -677 7 1115 292 208 56 0 chrX 69489939 69490011 -97160285 + MLT2B1 LTR ERVL 1 76 -439 7 1115 424 298 72 67 chrX 69490132 69490326 -97159970 + ORR1E LTR MaLR 163 357 -2 7 1115 737 380 71 11 chrX 69490328 69490682 -97159614 + MLT2B1 LTR ERVL 70 444 -76 7 1115 228 100 0 0 chrX 69490691 69490731 -97159565 + (TCTG)n Simple_repeat Simple_repeat 1 40 0 7 1115 210 370 10 52 chrX 69490808 69490905 -97159391 + L2a LINE L2 3016 3108 -318 7 1115 495 0 0 0 chrX 69492088 69492143 -97158153 + (GGAA)n Simple_repeat Simple_repeat 3 57 0 7 1115 611 289 158 4 chrX 69492143 69492383 -97157913 + MLT1B LTR MaLR 98 374 -16 7 1115 406 291 146 37 chrX 69493178 69493424 -97156872 + B4A SINE B4 2 274 -18 7 1115 238 307 49 10 chrX 69493440 69493542 -97156754 - RMER12 LTR ERVK -472 850 745 7 1115 612 0 0 0 chrX 69494986 69495054 -97155242 + (TA)n Simple_repeat Simple_repeat 1 68 0 7 1115 180 0 0 0 chrX 69495054 69495074 -97155222 + (TG)n Simple_repeat Simple_repeat 2 21 0 7 1115 180 0 0 0 chrX 69495305 69495325 -97154971 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 7 1115 427 215 316 11 chrX 69495577 69495751 -97154545 + MTEb LTR MaLR 141 367 -12 7 1115 284 387 22 14 chrX 69495772 69496050 -97154246 - HERV16-int LTR ERVL -3029 1967 1688 7 1115 705 289 58 5 chrX 69496359 69496550 -97153746 + MLT1A0 LTR MaLR 100 300 -65 7 1115 355 319 89 0 chrX 69497518 69497653 -97152643 - LTR16B1 LTR ERVL -4 476 330 7 1115 249 233 108 14 chrX 69497779 69497853 -97152443 + MER53 DNA hAT 87 167 -26 7 1115 247 267 67 0 chrX 69497793 69497868 -97152428 - MER53 DNA hAT -96 97 18 7 1115 521 285 30 37 chrX 69498101 69498236 -97152060 + RSINE1 SINE B4 19 152 -13 7 1115 395 38 19 0 chrX 69498238 69498291 -97152005 + (GA)n Simple_repeat Simple_repeat 1 54 0 7 1115 340 284 0 111 chrX 69498996 69499007 -97151289 - ID SINE ID -135 89 2 7 1115 350 266 0 102 chrX 69499007 69499095 -97151201 - ID4_ SINE ID -3 80 2 7 1115 3832 88 9 2 chrX 69499449 69499998 -97150298 - L1_Mus1 LINE L1 0 6567 6015 7 1115 3475 70 37 1 chrX 69500000 69500574 -97149722 - L1Md_F2 LINE L1 -563 6019 5426 1 1115 296 54 0 0 chrX 69500553 69500590 -97149706 + L1Md_F2 LINE L1 5418 5454 -429 1 1115 561 321 83 31 chrX 69500827 69501081 -97149215 + Lx8 LINE L1 7012 7278 -195 2 1115 393 58 0 0 chrX 69502308 69502360 -97147936 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1115 1122 118 34 19 chrX 69507133 69507357 -97142939 + RLTR13C2 LTR ERVK 582 1023 0 4 1115 198 330 91 66 chrX 69508548 69508746 -97141550 - L2 LINE L2 -782 2637 2435 5 1115 222 250 83 0 chrX 69511434 69511494 -97138802 - MIRc SINE MIR -124 144 80 6 1115 413 222 7 119 chrX 69511591 69511734 -97138562 + ID_B1 SINE B4 94 220 -4 7 1115 203 182 0 22 chrX 69511996 69512041 -97138255 + (TCCTG)n Simple_repeat Simple_repeat 2 45 0 8 1115 351 197 0 0 chrX 69515195 69515271 -97135025 + (TCTCTG)n Simple_repeat Simple_repeat 2 77 0 9 1115 222 184 0 0 chrX 69515271 69515347 -97134949 + (CTGGGG)n Simple_repeat Simple_repeat 5 80 0 1 1115 258 232 0 0 chrX 69515463 69515575 -97134721 + (CTGGGG)n Simple_repeat Simple_repeat 5 116 0 1 1115 528 209 0 0 chrX 69515597 69515774 -97134522 + (CTGGGG)n Simple_repeat Simple_repeat 4 180 0 1 1115 388 274 2 2 chrX 69515793 69516286 -97134010 + (CTGGGG)n Simple_repeat Simple_repeat 1 493 0 1 1115 237 65 0 0 chrX 69517071 69517102 -97133194 + (TAA)n Simple_repeat Simple_repeat 1 31 0 1 1115 289 212 50 0 chrX 69517188 69517268 -97133028 + L1ME3A LINE L1 6079 6162 -11 1 1115 259 262 81 27 chrX 69517422 69517571 -97132725 + L1MC5 LINE L1 7725 7881 -80 1 1115 344 267 120 45 chrX 69517622 69517822 -97132474 + L1ME3A LINE L1 5946 6160 -13 1 1115 396 0 0 0 chrX 69521010 69521054 -97129242 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 1 1115 342 0 0 0 chrX 69521342 69521380 -97128916 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 1115 450 0 0 0 chrX 69521383 69521433 -97128863 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1115 315 0 0 0 chrX 69521497 69521532 -97128764 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 1 1115 1199 63 0 0 chrX 69521532 69521691 -97128605 - B2_Mm1a SINE B2 -33 160 2 2 1115 686 129 64 14 chrX 69521760 69521901 -97128395 + URR1B DNA MER1_type 37 184 -41 2 1115 10364 41 1 1 chrX 69521901 69523826 -97126470 - L1Md_F2 LINE L1 -3 6579 4657 2 1115 299 143 0 0 chrX 69523830 69523879 -97126417 + URR1B DNA MER1_type 177 225 0 2 1115 287 345 61 9 chrX 69523972 69524086 -97126210 + MER45A DNA Tip100 18 137 -41 2 1115 365 333 34 73 chrX 69525894 69526098 -97124198 + B4A SINE B4 31 226 -66 2 1115 21 0 0 0 chrX 69526178 69526199 -97124097 + AT_rich Low_complexity Low_complexity 1 21 0 2 1115 360 0 0 0 chrX 69526803 69526843 -97123453 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1115 596 202 243 29 chrX 69527549 69527722 -97122574 - B3 SINE B2 -5 211 2 2 1115 338 316 61 31 chrX 69529256 69529419 -97120877 + RMER15 LTR ERVL 408 575 0 2 1115 441 0 0 0 chrX 69529524 69529573 -97120723 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 1115 306 195 0 0 chrX 69529575 69529652 -97120644 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 1115 3636 99 14 2 chrX 69530212 69530717 -97119579 - L1_Mm LINE L1 -680 5203 4693 3 1115 3374 59 0 21 chrX 69530717 69531151 -97119145 + L1_Mus2 LINE L1 6142 6566 0 3 1115 285 346 22 0 chrX 69532835 69532971 -97117325 - Tigger15a DNA TcMar -294 421 283 3 1115 314 262 24 0 chrX 69532993 69533077 -97117219 - B1_Mur2 SINE Alu 0 149 64 3 1115 433 351 83 17 chrX 69533244 69533272 -97117024 - Lx8 LINE L1 -93 7380 7352 3 1115 442 246 164 55 chrX 69533272 69533299 -97116997 - RSINE1 SINE B4 0 165 139 3 1115 639 0 0 0 chrX 69533299 69533370 -97116926 + (GAGAA)n Simple_repeat Simple_repeat 4 74 0 3 1115 442 246 164 55 chrX 69533370 69533488 -97116808 - RSINE1 SINE B4 -27 138 5 3 1115 704 302 219 9 chrX 69533488 69533968 -97116328 - Lx8 LINE L1 -122 7351 6770 3 1115 249 333 77 11 chrX 69534115 69534206 -97116090 - PB1D10 SINE Alu -20 97 1 3 1115 257 293 0 13 chrX 69534133 69534209 -97116087 - ID_B1 SINE B4 -71 153 79 3 1115 231 91 73 0 chrX 69534660 69534715 -97115581 + T-rich Low_complexity Low_complexity 3 61 0 4 1115 1131 88 0 39 chrX 69534721 69534874 -97115422 - B1_Mus2 SINE Alu 0 147 1 4 1115 21 0 0 0 chrX 69534877 69534898 -97115398 + AT_rich Low_complexity Low_complexity 1 21 0 4 1115 365 228 16 31 chrX 69534898 69535025 -97115271 - Lx8 LINE L1 0 7473 7349 4 1115 207 0 0 0 chrX 69535039 69535062 -97115234 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1115 594 308 92 53 chrX 69535093 69535299 -97114997 - B4 SINE B4 -77 215 2 4 1115 279 327 10 0 chrX 69535318 69535422 -97114874 - L2a LINE L2 -372 3054 2950 4 1115 479 299 47 151 chrX 69535521 69535820 -97114476 + MLT1B LTR MaLR 1 268 -122 4 1115 3222 67 5 0 chrX 69535820 69536224 -97114072 - L1Md_F2 LINE L1 -401 6181 5776 4 1115 2812 79 43 8 chrX 69536224 69536620 -97113676 + L1Md_F2 LINE L1 6173 6582 0 4 1115 540 281 35 17 chrX 69536622 69536796 -97113500 + MLT1B LTR MaLR 212 388 -2 4 1115 233 384 49 66 chrX 69537316 69537681 -97112615 + MLT1J2 LTR MaLR 86 444 -4 5 1115 1187 55 0 14 chrX 69537706 69537854 -97112442 + B1_Mm SINE Alu 2 147 0 5 1115 374 85 0 17 chrX 69537854 69537868 -97112428 + (GAA)n Simple_repeat Simple_repeat 1 14 0 5 1115 1002 81 35 0 chrX 69537868 69538040 -97112256 + (GGA)n Simple_repeat Simple_repeat 3 180 0 5 1115 1326 79 0 3 chrX 69538040 69538266 -97112030 + (GAA)n Simple_repeat Simple_repeat 1 225 0 5 1115 1646 91 37 0 chrX 69538298 69538539 -97111757 - Lx3_Mus LINE L1 0 7009 6760 5 1115 275 231 0 30 chrX 69538752 69538819 -97111477 - B4A SINE B4 -227 65 1 5 1115 1196 189 76 4 chrX 69538820 69539096 -97111200 - RLTR11A LTR ERVK -1 527 232 5 1115 274 264 21 42 chrX 69539096 69539191 -97111105 - MurERV4_19-int LTR ERVK -501 5279 5187 5 1115 3195 78 19 49 chrX 69539235 69539707 -97110589 - MurERV4_19-int LTR ERVK -557 5223 4766 5 1115 4895 75 3 3 chrX 69539707 69540337 -97109959 + Lx3_Mus LINE L1 6380 7009 0 5 1115 274 307 5 126 chrX 69540364 69540554 -97109742 - L1M3 LINE L1 -549 5631 5465 6 1115 2543 178 7 89 chrX 69540662 69541223 -97109073 - MurERV4-int LTR ERVK -2253 3007 2493 6 1115 947 100 0 0 chrX 69541228 69541378 -97108918 + RLTR11B LTR ERVK 237 386 -67 6 1115 330 300 143 23 chrX 69541380 69541513 -97108783 - B4A SINE B4 -142 150 2 6 1115 303 319 163 33 chrX 69541705 69541981 -97108315 - L1M5 LINE L1 -1038 5108 4797 6 1115 439 269 146 39 chrX 69542209 69542387 -97107909 - B3A SINE B2 0 198 2 6 1115 454 278 31 5 chrX 69542435 69542630 -97107666 + L1MB7 LINE L1 5743 5942 -242 6 1115 996 83 7 0 chrX 69543047 69543191 -97107105 - L1_Mus2 LINE L1 0 6566 6422 6 1115 465 86 0 0 chrX 69543696 69543766 -97106530 + L1_Mus2 LINE L1 6497 6566 0 6 1115 11595 38 1 1 chrX 69544023 69546079 -97104217 - L1Md_F2 LINE L1 0 6582 4529 6 1115 8796 108 16 48 chrX 69546078 69549316 -97100980 + L1_Mus2 LINE L1 3524 6565 -1 7 1115 32391 82 3 9 chrX 69549322 69551770 -97098526 + L1Md_F2 LINE L1 360 2799 -3084 7 1115 4696 10 0 8 chrX 69551770 69552293 -97098003 + L1Md_T LINE L1 6063 6581 -1 7 1115 32391 75 3 11 chrX 69552293 69555110 -97095186 + L1Md_F2 LINE L1 2800 5586 -297 7 1115 8222 45 6 2 chrX 69555110 69556100 -97094196 + L1Md_F2 LINE L1 5587 6580 -2 7 1115 243 88 0 0 chrX 69556158 69556192 -97094104 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 7 1115 811 292 194 2 chrX 69556220 69556627 -97093669 - Lx8 LINE L1 -375 7098 6614 7 1115 423 0 0 0 chrX 69556735 69556782 -97093514 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 1115 441 0 0 0 chrX 69556782 69556830 -97093466 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1115 227 339 15 0 chrX 69556837 69556902 -97093394 - ID4 SINE ID -13 70 5 7 1115 329 323 47 58 chrX 69556917 69557088 -97093208 - L1M4 LINE L1 -785 5361 5193 7 1115 310 361 20 14 chrX 69557101 69557247 -97093049 - B1_Mus2 SINE Alu 0 147 1 7 1115 532 282 8 8 chrX 69557124 69557249 -97093047 - ID_B1 SINE B4 -20 204 80 8 1115 23 0 0 0 chrX 69557594 69557617 -97092679 + AT_rich Low_complexity Low_complexity 1 23 0 8 1115 25 75 0 0 chrX 69557694 69557747 -97092549 + AT_rich Low_complexity Low_complexity 1 53 0 8 1115 382 289 0 40 chrX 69557875 69558001 -97092295 + Lx9 LINE L1 7214 7334 -310 8 1115 243 351 13 13 chrX 69558044 69558119 -97092177 - ID4_ SINE ID -7 76 2 8 1115 244 333 12 12 chrX 69558144 69558226 -97092070 - ID_B1 SINE B4 -41 183 102 8 1115 253 312 21 0 chrX 69558290 69558383 -97091913 - L1M5 LINE L1 -602 5842 5748 8 1115 291 231 58 52 chrX 69558378 69558533 -97091763 + L1M5 LINE L1 5322 5477 -967 8 1115 560 337 20 39 chrX 69558603 69558807 -97091489 - ID_B1 SINE B4 -6 218 19 8 1115 414 0 0 0 chrX 69558807 69558853 -97091443 + (TA)n Simple_repeat Simple_repeat 2 47 0 8 1115 1027 296 123 44 chrX 69558991 69559655 -97090641 - Lx9 LINE L1 -1 7643 6927 9 1115 243 255 0 0 chrX 69559799 69559850 -97090446 + Lx8 LINE L1 7011 7061 -412 9 1115 409 250 10 29 chrX 69559866 69559969 -97090327 - PB1D10 SINE Alu -14 103 3 9 1115 547 277 156 54 chrX 69560069 69560448 -97089848 - L1M4 LINE L1 -1786 4360 3914 7 1115 659 309 45 3 chrX 69560463 69560670 -97089626 - B3A SINE B2 -5 211 1 9 1115 380 316 59 83 chrX 69560755 69560959 -97089337 - Lx8 LINE L1 -234 7239 7041 9 1115 992 311 14 24 chrX 69561022 69561372 -97088924 - Lx8 LINE L1 -934 6710 6332 9 1115 26 50 0 0 chrX 69561535 69561575 -97088721 + AT_rich Low_complexity Low_complexity 1 40 0 9 1115 1605 221 71 6 chrX 69561731 69561884 -97088412 - ORR1D2 LTR MaLR -4 366 197 9 1115 1776 42 0 0 chrX 69561884 69562100 -97088196 - L1Md_T LINE L1 -1 6581 6366 9 1115 1605 221 71 6 chrX 69562100 69562282 -97088014 - ORR1D2 LTR MaLR -174 196 11 9 1115 502 206 18 18 chrX 69562465 69562574 -97087722 - Lx8 LINE L1 -1230 6414 6306 9 1115 229 237 12 106 chrX 69562581 69562666 -97087630 - B4 SINE B4 -207 85 9 9 1115 558 352 103 59 chrX 69563450 69564041 -97086255 - L2 LINE L2 -860 2559 1943 9 1115 440 363 92 25 chrX 69565255 69565580 -97084716 + LTR85c LTR Gypsy? 10 356 -467 1 1115 247 320 0 64 chrX 69566273 69566383 -97083913 - Charlie7 DNA MER1_type -2138 474 372 1 1115 365 301 90 35 chrX 69566383 69566583 -97083713 - L1MC LINE L1 -873 5471 5261 1 1115 1387 215 17 37 chrX 69566603 69566903 -97083393 - Lx5 LINE L1 -1 7049 6756 1 1115 1558 209 0 17 chrX 69566901 69567193 -97083103 + Lx5 LINE L1 6117 6403 -647 1 1115 1630 279 34 34 chrX 69567201 69567672 -97082624 + RCHARR1 DNA MER1_type 4 477 -497 1 1115 1128 63 14 0 chrX 69567672 69567815 -97082481 - B1_Mus2 SINE Alu 0 147 3 1 1115 1630 279 34 34 chrX 69567815 69567873 -97082423 + RCHARR1 DNA MER1_type 478 533 -441 1 1115 949 294 93 4 chrX 69567874 69568144 -97082152 - Lx8 LINE L1 -146 7327 7034 1 1115 607 145 93 40 chrX 69568436 69568559 -97081737 + RCHARR1 DNA MER1_type 725 855 -119 1 1115 1738 168 36 16 chrX 69568559 69568867 -97081429 - MTD LTR MaLR 0 419 106 1 1115 1128 66 59 0 chrX 69568867 69569019 -97081277 - Lx3A LINE L1 -198 6783 6623 1 1115 677 158 14 7 chrX 69569021 69569161 -97081135 + Lx3A LINE L1 6839 6979 -2 1 1115 306 0 0 0 chrX 69569171 69569205 -97081091 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 1115 416 234 34 86 chrX 69569205 69569322 -97080974 - MTD LTR MaLR -310 111 1 1 1115 482 200 17 17 chrX 69569323 69569440 -97080856 + RCHARR1 DNA MER1_type 858 974 0 1 1115 916 171 62 6 chrX 69569616 69569792 -97080504 - Lx4B LINE L1 -7 7051 6866 1 1115 845 294 107 19 chrX 69569801 69570317 -97079979 + L1MB7 LINE L1 5608 6168 -16 1 1115 222 405 37 43 chrX 69570795 69571118 -97079178 - L2 LINE L2 -1856 1563 1243 1 1115 292 256 191 147 chrX 69572199 69572381 -97077915 + MLT1H1 LTR MaLR 293 505 -50 1 1115 961 274 5 0 chrX 69572381 69572593 -97077703 - B3 SINE B2 0 216 4 1 1115 292 256 191 147 chrX 69572593 69572662 -97077634 + MLT1H1 LTR MaLR 506 555 0 1 1115 271 258 42 21 chrX 69573640 69573735 -97076561 + MIR3 SINE MIR 90 186 -22 1 1115 6192 50 15 65 chrX 69574689 69575564 -97074732 - L1Md_F3 LINE L1 -14 6570 5740 1 1115 267 279 130 8 chrX 69576372 69576495 -97073801 + L2 LINE L2 2722 2859 -560 1 1115 1061 265 41 63 chrX 69576527 69577143 -97073153 + RLTR18B LTR ERVK 1 616 0 1 1115 912 48 0 31 chrX 69577167 69577295 -97073001 - B1_Mm SINE Alu 0 147 24 1 1115 4594 56 3 7 chrX 69577485 69578076 -97072220 + L1Md_F2 LINE L1 5981 6569 -13 1 1115 365 277 92 8 chrX 69578584 69578715 -97071581 - L1MEg LINE L1 -5121 963 822 1 1115 966 230 14 5 chrX 69578726 69578936 -97071360 - B3 SINE B2 0 216 5 1 1115 24 96 0 0 chrX 69579291 69579364 -97070932 + AT_rich Low_complexity Low_complexity 1 73 0 1 1115 313 328 40 23 chrX 69579613 69579788 -97070508 - L1M2 LINE L1 -527 5773 5596 1 1115 3800 182 38 82 chrX 69579814 69580668 -97069628 + RLTR40 LTR ERVK 2 817 0 1 1115 1624 284 178 22 chrX 69581010 69581594 -97068702 - Lx9 LINE L1 -596 7048 6374 1 1115 441 95 0 0 chrX 69581594 69581657 -97068639 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 1115 396 59 0 0 chrX 69581658 69581709 -97068587 + (TATG)n Simple_repeat Simple_repeat 4 54 0 1 1115 1666 181 66 17 chrX 69581916 69582332 -97067964 - Lx9 LINE L1 -1679 5965 5474 1 1115 888 284 67 50 chrX 69582339 69582746 -97067550 + Lx9 LINE L1 6922 7434 -210 1 1115 333 0 0 0 chrX 69582746 69582783 -97067513 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1115 559 357 48 52 chrX 69582783 69582922 -97067374 + Lx9 LINE L1 7330 7457 -16 1 1115 342 67 0 0 chrX 69583515 69583560 -97066736 + (A)n Simple_repeat Simple_repeat 1 45 0 1 1115 2610 47 0 0 chrX 69583741 69584061 -97066235 - L1_Mus1 LINE L1 0 6567 6248 1 1115 2115 81 20 0 chrX 69584061 69584358 -97065938 + L1_Mus2 LINE L1 5765 6067 -499 1 1115 522 344 140 7 chrX 69584544 69584837 -97065459 + LTR50 LTR ERVL 213 544 -251 1 1115 186 339 98 38 chrX 69585677 69585809 -97064487 + MIRm SINE MIR 4 143 -133 1 1115 225 320 0 0 chrX 69585935 69586013 -97064283 + PB1D10 SINE Alu 40 117 0 1 1115 3775 35 0 9 chrX 69586513 69586975 -97063321 - L1Md_F3 LINE L1 -2 6582 6125 1 1115 3282 19 0 0 chrX 69586975 69587353 -97062943 + L1Md_F3 LINE L1 5752 6129 -455 1 1115 239 232 0 35 chrX 69587394 69587452 -97062844 + (CATATA)n Simple_repeat Simple_repeat 5 60 0 1 1115 1362 281 44 87 chrX 69588264 69589078 -97061218 + L1MA4 LINE L1 4361 5139 -1004 1 1115 198 233 0 0 chrX 69589235 69589295 -97061001 + GA-rich Low_complexity Low_complexity 1 60 0 1 1115 443 126 19 0 chrX 69589302 69589405 -97060891 + (CAGA)n Simple_repeat Simple_repeat 4 108 0 1 1115 354 45 0 0 chrX 69589459 69589503 -97060793 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1115 280 273 28 55 chrX 69589650 69589832 -97060464 + L1MA4 LINE L1 5271 5447 -850 1 1115 794 316 52 8 chrX 69589837 69590105 -97060191 + B4A SINE B4 13 292 0 1 1115 844 308 62 12 chrX 69590211 69590632 -97059664 + L1MA4 LINE L1 5487 5928 -372 1 1115 26 50 0 0 chrX 69590799 69590839 -97059457 + AT_rich Low_complexity Low_complexity 1 40 0 1 1115 756 295 30 10 chrX 69590883 69591188 -97059108 + L1MC LINE L1 4076 4386 -1760 1 1115 722 338 51 31 chrX 69591246 69591637 -97058659 + MLT1G-int LTR MaLR 778 1176 -313 1 1115 200 264 19 0 chrX 69591756 69591809 -97058487 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 1115 226 260 0 0 chrX 69591828 69591878 -97058418 + Lx9 LINE L1 7387 7436 -208 1 1115 1081 365 56 21 chrX 69592121 69592692 -97057604 + MLT1G LTR MaLR 1 591 0 1 1115 21 0 0 0 chrX 69592705 69592726 -97057570 + AT_rich Low_complexity Low_complexity 1 21 0 1 1115 645 336 78 48 chrX 69592756 69593479 -97056817 + L1ME3A LINE L1 5320 6063 -110 1 1115 207 315 0 40 chrX 69594311 69594387 -97055909 + C-rich Low_complexity Low_complexity 1 73 0 1 1115 488 280 153 18 chrX 69594822 69595522 -97054774 - L1MC3 LINE L1 -353 5991 5175 1 1115 732 297 95 35 chrX 69595803 69596257 -97054039 + L1M5 LINE L1 4853 5333 -813 1 1115 383 252 38 11 chrX 69596590 69596707 -97053589 - MLT1A1 LTR MaLR 0 408 248 1 1115 328 292 20 7 chrX 69596824 69596972 -97053324 + L1M2 LINE L1 5106 5255 -888 1 139 29946 117 29 14 chrX 69597717 69603945 -97046351 + L1_Mus2 LINE L1 393 6566 0 1 1116 31 92 0 0 chrX 69604056 69604143 -97046153 + AT_rich Low_complexity Low_complexity 1 87 0 1 1116 382 132 26 0 chrX 69604203 69604279 -97046017 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 1 1116 1222 211 73 7 chrX 69604923 69605209 -97045087 - RMER1C Other Other 0 1342 1038 1 1116 568 263 26 77 chrX 69605208 69605402 -97044894 - Lx5 LINE L1 -7 7043 6860 1 1116 369 283 83 47 chrX 69605414 69605607 -97044689 - Lx8 LINE L1 -10 7463 7264 1 1116 1171 312 55 7 chrX 69605820 69606253 -97044043 + Lx8 LINE L1 6781 7234 -239 1 1116 547 226 249 16 chrX 69606305 69606556 -97043740 + Lx8 LINE L1 6376 6686 -787 1 1116 4045 89 7 0 chrX 69606602 69607142 -97043154 - L1_Mus1 LINE L1 -4 6563 6020 1 1116 412 59 0 0 chrX 69607142 69607193 -97043103 + L1Md_F2 LINE L1 5967 6017 -565 1 1116 229 319 42 21 chrX 69607170 69607266 -97043030 + Lx8 LINE L1 6657 6754 -719 1 1116 850 326 46 12 chrX 69607285 69607549 -97042747 - ORR1D2 LTR MaLR -9 412 89 1 1116 419 210 78 45 chrX 69607549 69607750 -97042546 - ORR1D1 LTR MaLR 0 394 172 1 1116 923 194 5 112 chrX 69607761 69608005 -97042291 - ORR1D1 LTR MaLR -144 234 1 1 1116 265 375 0 0 chrX 69608005 69608097 -97042199 - ORR1D1 LTR MaLR -282 92 1 1 1116 443 294 122 23 chrX 69608139 69608657 -97041639 + L1MD LINE L1 3540 4108 -2038 1 1116 4385 34 0 102 chrX 69608674 69608967 -97041329 + L1Md_F2 LINE L1 5321 5578 -305 1 1116 7393 46 10 0 chrX 69608967 69609885 -97040411 + L1Md_F2 LINE L1 5656 6582 0 1 1116 4385 23 2 9 chrX 69609885 69610280 -97040016 + L1Md_F2 LINE L1 5579 5946 -636 1 1116 3527 50 2 20 chrX 69610282 69610733 -97039563 + L1Md_F2 LINE L1 6136 6578 -4 1 1116 257 220 118 21 chrX 69611010 69611103 -97039193 - MTEa LTR MaLR -5 374 273 1 1116 34 42 0 0 chrX 69611871 69611919 -97038377 + AT_rich Low_complexity Low_complexity 1 48 0 1 1116 586 305 39 7 chrX 69611920 69612075 -97038221 - RSINE1 SINE B4 -3 162 3 1 1116 318 290 14 0 chrX 69612075 69612220 -97038076 + L1MD LINE L1 2894 3040 -3106 1 1116 282 216 0 0 chrX 69612394 69612468 -97037828 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 1116 3230 190 18 6 chrX 69612597 69613260 -97037036 - Lx5 LINE L1 -775 6275 5605 1 1116 286 200 0 0 chrX 69613250 69613305 -97036991 + Lx5 LINE L1 6270 6324 -726 1 1116 563 246 51 0 chrX 69613305 69613443 -97036853 + MT2_Mm LTR ERVL 1 145 -348 1 1116 3928 146 72 79 chrX 69613322 69614207 -97036089 + ORR1A3-int LTR MaLR 627 1505 -458 1 1116 533 122 0 11 chrX 69614195 69614286 -97036010 - RMER19B LTR ERVK -812 90 1 1 1116 3544 203 6 8 chrX 69614287 69614946 -97035350 + Lx5 LINE L1 6389 7046 -4 1 1116 4514 128 18 7 chrX 69614961 69615685 -97034611 + Lx LINE L1 5916 6647 -7 1 1116 350 298 144 0 chrX 69615703 69615807 -97034489 + B1F2 SINE Alu 26 144 -5 1 1116 740 204 33 50 chrX 69616818 69616999 -97033297 + B3A SINE B2 5 182 -16 1 1116 3002 160 103 28 chrX 69617256 69617821 -97032475 - RMER19C LTR ERVK -2 609 3 1 1116 22 35 0 0 chrX 69618081 69618110 -97032186 + AT_rich Low_complexity Low_complexity 1 29 0 1 1116 21 0 0 0 chrX 69618397 69618418 -97031878 + AT_rich Low_complexity Low_complexity 1 21 0 1 1116 492 255 78 141 chrX 69618690 69618973 -97031323 + Lx9 LINE L1 7135 7399 -245 1 1116 501 276 75 65 chrX 69619148 69619442 -97030854 + L1MEc LINE L1 609 905 -5495 1 1116 3640 136 24 2 chrX 69619442 69620075 -97030221 - L1_Mur2 LINE L1 -1559 4318 3672 1 1116 2773 140 18 4 chrX 69620075 69620577 -97029719 + L1_Mur2 LINE L1 4306 4814 -1063 1 1116 1551 200 27 48 chrX 69620574 69620910 -97029386 + Lx5 LINE L1 6719 7047 -3 1 1116 1168 243 68 9 chrX 69620992 69621329 -97028967 + Lx7 LINE L1 6954 7310 -386 1 1116 214 292 0 0 chrX 69621339 69621428 -97028868 + T-rich Low_complexity Low_complexity 1 89 0 1 1116 1238 253 81 0 chrX 69621448 69621832 -97028464 - RCHARR1 DNA MER1_type -142 832 418 1 1116 255 174 28 28 chrX 69621834 69621850 -97028446 + T-rich Low_complexity Low_complexity 55 71 0 1 1116 1056 103 7 0 chrX 69621850 69621996 -97028300 - B1_Mus1 SINE Alu 0 148 2 1 1116 255 174 28 28 chrX 69621996 69622050 -97028246 + T-rich Low_complexity Low_complexity 1 54 0 1 1116 225 233 54 22 chrX 69622058 69622150 -97028146 + Lx8 LINE L1 7353 7447 -26 1 1116 1097 83 0 27 chrX 69622347 69622482 -97027814 + B1_Mus1 SINE Alu 1 135 -13 2 1116 216 0 0 0 chrX 69622482 69622506 -97027790 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 1116 1097 83 0 27 chrX 69622506 69622519 -97027777 + B1_Mus1 SINE Alu 136 145 -3 2 1116 711 222 42 36 chrX 69622773 69622941 -97027355 + B3 SINE B2 46 214 -2 2 1116 1211 140 16 41 chrX 69622997 69623242 -97027054 - Lx2 LINE L1 -918 6079 5841 2 1116 5074 131 11 0 chrX 69623242 69624006 -97026290 + Lx2 LINE L1 6225 6996 -1 2 1116 545 231 0 8 chrX 69624051 69624169 -97026127 - Lx7 LINE L1 -443 7253 7137 2 1116 926 203 15 67 chrX 69624158 69624427 -97025869 + Lx7 LINE L1 7442 7696 0 1 1116 231 171 14 28 chrX 69624454 69624526 -97025770 + Lx9 LINE L1 7572 7642 -2 2 1116 246 295 82 31 chrX 69624600 69624698 -97025598 - MLT2B3 LTR ERVL -451 103 1 2 1116 463 291 78 29 chrX 69624699 69624904 -97025392 - MER2 DNA MER2_type -9 336 122 2 1116 3034 51 3 0 chrX 69625272 69625645 -97024651 - L1_Mus1 LINE L1 -1 6566 6193 2 1116 21 36 0 0 chrX 69625751 69625779 -97024517 + AT_rich Low_complexity Low_complexity 1 28 0 2 1116 283 109 18 18 chrX 69626289 69626345 -97023951 - Lx7 LINE L1 0 7696 7641 2 1116 198 242 0 0 chrX 69628576 69628642 -97021654 + GA-rich Low_complexity Low_complexity 1 66 0 2 1116 369 206 62 11 chrX 69634089 69634266 -97016030 + Lx5 LINE L1 6025 6210 -840 2 1116 3165 58 2 8 chrX 69634266 69634664 -97015632 + MTA_Mm LTR MaLR 1 396 0 2 1116 5063 134 38 25 chrX 69634664 69635044 -97015252 + MTA_Mm-int LTR MaLR 3 389 -869 2 1116 2821 51 0 6 chrX 69635044 69635398 -97014898 + L1Md_F2 LINE L1 6231 6582 0 2 1116 5063 134 38 25 chrX 69635398 69635898 -97014398 + MTA_Mm-int LTR MaLR 390 894 -364 2 1116 7931 58 6 4 chrX 69635899 69637651 -97012645 - L1Md_F2 LINE L1 0 6582 4832 2 1116 1840 76 21 7 chrX 69637652 69637942 -97012354 + MTA_Mm-int LTR MaLR 805 1098 0 2 1116 2952 71 8 8 chrX 69637942 69638338 -97011958 + MTA_Mm LTR MaLR 1 396 0 2 1116 3084 173 19 7 chrX 69638338 69638857 -97011439 + Lx5 LINE L1 6206 6724 -326 2 1116 180 0 0 0 chrX 69638857 69638877 -97011419 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 2 1116 3084 173 19 7 chrX 69638877 69638946 -97011350 + Lx5 LINE L1 6725 6801 -249 2 1116 304 286 65 11 chrX 69639097 69639281 -97011015 - Lx9 LINE L1 -93 7551 7358 2 1116 1029 203 96 120 chrX 69639666 69640057 -97010239 + MT2A LTR ERVL 3 523 -61 2 1116 270 0 0 0 chrX 69640057 69640087 -97010209 + (TC)n Simple_repeat Simple_repeat 2 31 0 2 1116 300 27 0 0 chrX 69640087 69640123 -97010173 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1116 879 238 154 70 chrX 69640123 69640161 -97010135 + MT2A LTR ERVL 524 577 -7 2 1116 1431 150 25 36 chrX 69640422 69640698 -97009598 + Lx3B LINE L1 6697 6969 -4 2 1116 802 226 55 8 chrX 69641040 69641277 -97009019 - Lx7 LINE L1 -4 7692 7445 2 1116 646 246 78 9 chrX 69642038 69642255 -97008041 + L1_Rod LINE L1 4007 4238 -1609 2 1116 298 287 89 28 chrX 69642305 69642484 -97007812 - L1M5 LINE L1 -623 5556 5367 2 1116 389 208 30 37 chrX 69642488 69642623 -97007673 + L1_Rod LINE L1 2778 2911 -2936 2 1116 261 321 38 11 chrX 69642829 69643015 -97007281 - L1M5 LINE L1 -2389 3757 3567 2 1116 293 0 27 0 chrX 69643183 69643220 -97007076 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 1116 314 284 26 45 chrX 69643351 69643506 -97006790 - L1MC5 LINE L1 -161 7800 7649 2 1116 420 341 8 0 chrX 69643509 69643635 -97006661 + RSINE1 SINE B4 3 129 -36 2 1116 2008 155 180 0 chrX 69644212 69644359 -97005937 - Lx9 LINE L1 -6 7638 7435 2 1116 309 26 0 0 chrX 69644359 69644397 -97005899 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1116 2008 155 180 0 chrX 69644397 69644687 -97005609 - Lx9 LINE L1 -210 7434 7123 2 1116 38034 31 2 6 chrX 69644671 69651054 -96999242 - L1Md_A LINE L1 0 6582 233 2 1116 308 203 14 0 chrX 69651056 69651125 -96999171 - Lx9 LINE L1 -498 7146 7077 2 1116 253 229 242 16 chrX 69651335 69651459 -96998837 - L1MC3 LINE L1 -1000 6785 6634 2 1116 2062 156 67 34 chrX 69651550 69651968 -96998328 + RMER10A LTR ERVL 1 432 -10 2 1116 628 267 17 6 chrX 69651995 69652176 -96998120 - L1MC3 LINE L1 -1203 6582 6400 2 1116 261 0 0 0 chrX 69652239 69652268 -96998028 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1116 396 0 0 0 chrX 69652268 69652311 -96997985 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 1116 247 281 28 62 chrX 69652531 69652675 -96997621 - L1MC3 LINE L1 -1655 6130 5992 2 1116 265 374 0 0 chrX 69653207 69653290 -96997006 - ID2 SINE ID 0 83 1 2 1116 351 298 79 106 chrX 69653419 69653760 -96996536 - L1M4b LINE L1 -2693 4310 3979 2 1116 916 253 161 23 chrX 69653760 69654176 -96996120 + RMER4B LTR ERVK 20 585 0 2 1116 341 281 0 88 chrX 69655493 69655606 -96994690 - PB1D7 SINE Alu 0 120 18 2 1116 393 22 0 0 chrX 69655644 69655690 -96994606 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1116 273 375 34 20 chrX 69655716 69655863 -96994433 + ORR1E LTR MaLR 1 149 -210 2 1116 523 323 30 27 chrX 69656264 69656598 -96993698 - L1MB8 LINE L1 -15 6163 5829 2 1116 299 319 10 21 chrX 69656775 69656871 -96993425 - B4A SINE B4 0 292 198 2 1116 305 44 0 0 chrX 69656879 69656924 -96993372 - L1_Mus2 LINE L1 0 6566 6522 2 1116 5544 57 9 3 chrX 69656924 69657670 -96992626 - L1_Mus2 LINE L1 -186 6380 5630 2 1116 375 322 18 79 chrX 69657670 69657835 -96992461 - B4A SINE B4 -70 222 68 2 1116 267 307 93 23 chrX 69657886 69658143 -96992153 - L1M4b LINE L1 -4512 2822 2548 2 1116 383 271 189 2 chrX 69658380 69658776 -96991520 - L1M4b LINE L1 -5155 2179 1710 2 1116 228 67 0 0 chrX 69658804 69658834 -96991462 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2 1116 257 353 118 0 chrX 69659316 69659435 -96990861 + MLT1I LTR MaLR 11 143 -268 2 1116 259 322 32 41 chrX 69659482 69659605 -96990691 - MLT1I LTR MaLR -8 403 282 2 1116 1435 58 11 0 chrX 69659653 69659841 -96990455 - B2_Mm1t SINE B2 -3 190 1 2 1116 248 388 54 0 chrX 69659936 69660065 -96990231 + MLT1I-int LTR MaLR 47 182 -1205 2 1116 280 299 26 118 chrX 69660128 69660280 -96990016 + MLT1I-int LTR MaLR 299 436 -951 2 1116 191 174 60 80 chrX 69660398 69660448 -96989848 + L3b LINE CR1 198 246 -236 2 1116 229 306 86 26 chrX 69660789 69660940 -96989356 + MLT1I-int LTR MaLR 1000 1159 -250 2 1116 281 316 10 31 chrX 69661940 69662038 -96988258 + MTE2b LTR MaLR 276 371 -8 2 1116 207 0 0 0 chrX 69662667 69662690 -96987606 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1116 1823 186 158 15 chrX 69662697 69663230 -96987066 + Lx7 LINE L1 6637 7245 -451 2 1116 334 274 35 0 chrX 69663366 69663479 -96986817 - Lx8 LINE L1 -87 7386 7270 2 1116 189 0 0 0 chrX 69663516 69663537 -96986759 + (TCTG)n Simple_repeat Simple_repeat 4 24 0 2 1116 409 343 129 15 chrX 69663608 69663809 -96986487 - MER58A DNA MER1_type 0 224 1 2 1116 247 190 82 12 chrX 69663895 69663980 -96986316 - Lx7 LINE L1 -151 7545 7455 2 1116 1687 59 59 0 chrX 69663980 69664202 -96986094 + ORR1A1 LTR MaLR 112 346 0 2 1116 3698 214 56 12 chrX 69664203 69665022 -96985274 - Lx6 LINE L1 -384 7076 6222 2 1116 423 214 0 0 chrX 69665022 69665120 -96985176 + Lx7 LINE L1 6124 6221 -1475 2 1116 21 0 0 0 chrX 69667319 69667340 -96982956 + AT_rich Low_complexity Low_complexity 1 21 0 2 1116 184 345 142 0 chrX 69667948 69668096 -96982200 + L2 LINE L2 2742 2910 -509 2 1116 448 277 44 14 chrX 69670352 69670540 -96979756 - MLT1D LTR MaLR -3 502 270 2 1116 451 264 28 9 chrX 69670585 69670692 -96979604 + B1F SINE Alu 31 139 -10 2 1116 207 363 112 19 chrX 69670731 69670891 -96979405 + MIRb SINE MIR 88 262 -6 2 1116 292 355 85 134 chrX 69671860 69672143 -96978153 + B4A SINE B4 24 292 0 2 1116 393 302 128 49 chrX 69673549 69673625 -96976671 - B4A SINE B4 -6 286 218 2 1116 225 0 0 0 chrX 69673625 69673650 -96976646 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 1116 393 302 128 49 chrX 69673650 69673838 -96976458 - B4A SINE B4 -75 217 1 2 1116 225 0 0 0 chrX 69674488 69674513 -96975783 + (TC)n Simple_repeat Simple_repeat 2 26 0 2 1116 384 22 0 0 chrX 69674513 69674557 -96975739 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1116 311 363 0 11 chrX 69675102 69675194 -96975102 + MLT1G LTR MaLR 395 485 -106 2 1116 374 240 156 15 chrX 69675413 69675612 -96974684 - L2 LINE L2 -1276 2143 1917 2 1116 396 236 47 0 chrX 69675749 69675855 -96974441 + L1MA6 LINE L1 5828 5938 -362 2 1116 1172 233 98 36 chrX 69675870 69676227 -96974069 + MTE2b LTR MaLR 1 379 0 2 1116 264 170 6 17 chrX 69676966 69677030 -96973266 - L2c LINE L2 -6 3420 3341 2 1116 227 352 11 0 chrX 69677031 69677122 -96973174 + CT-rich Low_complexity Low_complexity 3 94 0 2 1116 22 0 0 0 chrX 69677351 69677373 -96972923 + AT_rich Low_complexity Low_complexity 1 22 0 2 1116 360 0 0 0 chrX 69677457 69677497 -96972799 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1116 276 120 0 0 chrX 69679341 69679391 -96970905 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 1116 1191 275 56 18 chrX 69680545 69680885 -96969411 + MTD LTR MaLR 53 405 -14 2 1116 246 324 28 57 chrX 69680902 69681008 -96969288 + MIR SINE MIR 73 182 -94 2 1116 189 306 20 0 chrX 69681129 69681178 -96969118 - MIR SINE MIR -133 75 26 2 1116 208 129 65 0 chrX 69681517 69681579 -96968717 + (TCTCTG)n Simple_repeat Simple_repeat 5 70 0 2 1116 243 0 0 0 chrX 69681588 69681615 -96968681 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 1116 30 45 0 0 chrX 69681680 69681724 -96968572 + AT_rich Low_complexity Low_complexity 1 44 0 2 1116 260 286 82 48 chrX 69682351 69682498 -96967798 - L2 LINE L2 -373 3046 2895 2 1116 225 278 101 20 chrX 69683192 69683291 -96967005 + L1MB2 LINE L1 6004 6110 -61 2 1116 787 268 49 128 chrX 69683462 69683791 -96966505 + MTE2a LTR MaLR 1 303 -76 2 1116 189 0 0 0 chrX 69683807 69683828 -96966468 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 2 1116 29 28 0 0 chrX 69683828 69683864 -96966432 + AT_rich Low_complexity Low_complexity 1 36 0 2 1116 716 286 56 30 chrX 69684086 69684284 -96966012 + B4A SINE B4 46 248 -44 2 1116 1954 125 0 0 chrX 69684307 69684587 -96965709 - L1_Mm LINE L1 -279 5604 5325 2 1116 6116 102 12 0 chrX 69684588 69685453 -96964843 + L1_Mus3 LINE L1 5763 6637 -1 2 1116 244 409 87 0 chrX 69685614 69685729 -96964567 + PB1 SINE Alu 1 125 -2 2 1116 202 362 70 39 chrX 69685900 69686130 -96964166 - L3 LINE CR1 -832 3657 3421 2 1116 516 266 111 66 chrX 69686179 69686360 -96963936 + B3 SINE B2 1 189 -27 2 1116 791 328 29 16 chrX 69687169 69687414 -96962882 + B4A SINE B4 2 249 -43 2 1116 2378 231 32 43 chrX 69687675 69688397 -96961899 - L1_Mur3 LINE L1 -1606 4274 3561 2 1116 336 332 79 47 chrX 69688664 69689173 -96961123 + L1M7 LINE L1 1455 1979 -4239 2 1116 1849 186 65 3 chrX 69689422 69689793 -96960503 + ORR1B1 LTR MaLR 1 394 0 2 1116 399 308 76 25 chrX 69692632 69692988 -96957308 - L1ME2 LINE L1 -249 5915 5542 3 1116 248 212 91 13 chrX 69693217 69693305 -96956991 - L1MEg LINE L1 -4625 1759 1691 3 1116 322 311 197 28 chrX 69693311 69693529 -96956767 - L1MEg LINE L1 -4946 1532 1278 3 1116 3301 85 76 2 chrX 69693531 69694005 -96956291 - L1_Mus3 LINE L1 -4 6634 6126 3 1116 247 244 22 11 chrX 69694097 69694188 -96956108 - L1MEg LINE L1 -5316 1162 1071 3 1116 334 255 126 13 chrX 69694645 69694796 -96955500 - L1ME2 LINE L1 -1359 4787 4620 3 1116 573 336 58 31 chrX 69694974 69695266 -96955030 - MLT1D LTR MaLR 0 505 206 3 1116 316 305 130 0 chrX 69695280 69695411 -96954885 - MLT1D LTR MaLR -357 148 1 3 1116 720 275 44 20 chrX 69696231 69696400 -96953896 + B3 SINE B2 2 167 -49 3 1116 183 129 0 0 chrX 69696400 69696431 -96953865 + (CATA)n Simple_repeat Simple_repeat 4 34 0 3 1116 720 275 44 20 chrX 69696431 69696465 -96953831 + B3 SINE B2 168 208 -8 3 1116 201 147 0 0 chrX 69696696 69696730 -96953566 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1116 430 339 72 18 chrX 69697281 69697503 -96952793 - MIR SINE MIR -21 241 8 3 1116 620 291 68 29 chrX 69697544 69697749 -96952547 + B3 SINE B2 1 213 -3 3 1116 193 318 16 0 chrX 69697809 69697872 -96952424 + L2 LINE L2 2042 2105 -1314 3 1116 532 258 63 36 chrX 69697878 69698092 -96952204 + MLT1C LTR MaLR 228 489 -16 3 1116 207 295 0 37 chrX 69698336 69698417 -96951879 + CT-rich Low_complexity Low_complexity 4 81 0 3 1116 25 75 0 0 chrX 69698547 69698600 -96951696 + AT_rich Low_complexity Low_complexity 1 53 0 3 1116 180 211 36 71 chrX 69699054 69699110 -96951186 - L3 LINE CR1 -3453 1036 983 3 1116 5048 49 27 2 chrX 69699554 69700189 -96950107 + L1Md_F2 LINE L1 5920 6570 -12 3 1116 5930 25 18 3 chrX 69700458 69701167 -96949129 - L1Md_F3 LINE L1 0 6584 5865 3 1116 4085 100 21 26 chrX 69701217 69701832 -96948464 + L1_Mus3 LINE L1 6020 6631 -7 3 1116 227 214 99 14 chrX 69702100 69702171 -96948125 - MLT1E2 LTR MaLR -543 84 8 3 1116 217 359 67 17 chrX 69702395 69702514 -96947782 + MIRc SINE MIR 101 225 -43 3 1116 493 316 100 60 chrX 69702620 69702990 -96947306 - MLT1B LTR MaLR -3 387 3 3 1116 731 217 61 41 chrX 69703754 69703951 -96946345 - B3 SINE B2 -15 201 1 3 1116 206 333 29 80 chrX 69704706 69704843 -96945453 + MIRm SINE MIR 34 163 -113 3 1116 465 325 60 33 chrX 69705397 69705728 -96944568 - Charlie8 DNA MER1_type -6 2422 2083 3 1116 251 333 113 39 chrX 69706096 69706299 -96943997 - Charlie8 DNA MER1_type -1289 1139 922 3 1116 360 344 62 39 chrX 69706334 69706464 -96943832 + B4A SINE B4 1 133 -159 3 1116 3145 76 5 2 chrX 69706685 69707106 -96943190 + L1_Mus2 LINE L1 6145 6566 0 3 1116 715 210 0 100 chrX 69707143 69707323 -96942973 - RSINE1 SINE B4 0 165 4 3 1116 233 250 92 20 chrX 69707382 69707480 -96942816 - Charlie8 DNA MER1_type -1761 667 563 3 1116 526 314 122 1 chrX 69707489 69707732 -96942564 + Tigger7 DNA MER2_type 8 305 -2186 3 1116 244 208 173 49 chrX 69707740 69707821 -96942475 + Tigger7 DNA MER2_type 2158 2248 -243 3 1116 3344 112 9 31 chrX 69708089 69708633 -96941663 + Lx LINE L1 6123 6654 0 3 1116 1580 225 23 26 chrX 69708730 69708848 -96941448 - Lx9 LINE L1 -23 7621 7506 3 1116 297 0 0 0 chrX 69708848 69708881 -96941415 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1116 1580 225 23 26 chrX 69708881 69709191 -96941105 - Lx9 LINE L1 -139 7505 7195 3 1116 686 250 46 15 chrX 69709174 69709369 -96940927 + Lx9 LINE L1 7008 7208 -436 3 1116 245 168 55 54 chrX 69709840 69709920 -96940376 + MTB_Mm LTR MaLR 218 313 -94 3 1116 2550 109 11 0 chrX 69709906 69710272 -96940024 - MTC LTR MaLR -51 370 1 3 1116 8711 148 76 46 chrX 69710273 69712180 -96938116 - L1_Mur3 LINE L1 -1518 4362 2398 3 1116 1749 161 123 0 chrX 69712180 69712497 -96937799 - MTC LTR MaLR -65 356 1 3 1116 3453 60 15 14 chrX 69712937 69713510 -96936786 + L1Md_F2 LINE L1 5597 6582 0 3 1116 4433 58 0 9 chrX 69713510 69714083 -96936213 + L1Md_F2 LINE L1 6005 6572 -10 3 1116 2485 39 7 0 chrX 69715722 69716027 -96934269 + Lx LINE L1 5693 5999 -655 3 1116 961 302 43 23 chrX 69716030 69716376 -96933920 + Lx6 LINE L1 7078 7430 -30 3 1116 495 252 9 18 chrX 69716383 69716496 -96933800 - MTA_Mm LTR MaLR -284 112 1 3 1116 284 163 0 0 chrX 69716587 69716636 -96933660 + MTEb LTR MaLR 1 49 -330 3 1116 1036 247 22 0 chrX 69716663 69716894 -96933402 + MTD LTR MaLR 1 236 -183 3 1116 300 309 67 88 chrX 69716920 69717158 -96933138 + MTEb LTR MaLR 10 242 -137 3 1116 821 60 0 25 chrX 69717277 69717397 -96932899 - L1_Mus2 LINE L1 -18 6548 6432 3 1116 372 311 42 73 chrX 69717580 69717771 -96932525 - L1MEg LINE L1 -1327 4819 4635 3 1116 233 295 13 0 chrX 69717774 69717852 -96932444 - L1MEg LINE L1 -4919 1323 1245 3 1116 417 316 0 50 chrX 69717960 69718120 -96932176 - B4A SINE B4 -8 284 133 3 1116 206 317 119 48 chrX 69719430 69719556 -96930740 + L2a LINE L2 2549 2683 -736 3 1116 614 214 63 0 chrX 69719649 69719775 -96930521 + Lx8 LINE L1 6785 6918 -555 3 1116 1575 47 0 0 chrX 69719775 69719965 -96930331 + B2_Mm1a SINE B2 2 191 -2 3 1116 572 288 21 30 chrX 69720479 69720715 -96929581 + L1MA5 LINE L1 6052 6285 -15 3 1116 283 289 84 39 chrX 69720752 69720907 -96929389 + L2a LINE L2 3263 3424 -2 3 1116 4558 48 3 2 chrX 69722678 69723244 -96927052 - L1_Mus1 LINE L1 0 6567 6001 3 1116 187 310 59 20 chrX 69724709 69724811 -96925485 - MIR3 SINE MIR -20 188 83 3 1116 1277 189 32 25 chrX 69726434 69726716 -96923580 - Lx7 LINE L1 -21 7675 7392 3 1116 906 133 0 0 chrX 69726716 69726866 -96923430 + (TA)n Simple_repeat Simple_repeat 2 151 0 3 1116 30 0 0 0 chrX 69726973 69727003 -96923293 + AT_rich Low_complexity Low_complexity 1 30 0 3 1116 182 91 30 0 chrX 69727010 69727043 -96923253 + (TAAAAA)n Simple_repeat Simple_repeat 1 34 0 3 1116 6858 217 59 30 chrX 69727043 69727689 -96922607 - Lx7 LINE L1 -329 7367 6748 3 1116 489 47 0 0 chrX 69727689 69727753 -96922543 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 3 1116 6858 217 59 30 chrX 69727753 69728760 -96921536 - Lx7 LINE L1 -949 6747 5667 3 1116 7229 166 19 24 chrX 69728763 69728907 -96921389 - L1_Mur3 LINE L1 -51 5829 5691 3 1116 1780 83 4 0 chrX 69728907 69729147 -96921149 + L1_Mus2 LINE L1 6316 6556 -10 3 1116 183 42 0 0 chrX 69729147 69729171 -96921125 + (TAA)n Simple_repeat Simple_repeat 1 24 0 3 139 7229 166 19 24 chrX 69729171 69730424 -96919872 - L1_Mur3 LINE L1 -190 5690 4439 3 1117 183 298 117 63 chrX 69730469 69730580 -96919716 - MIR3 SINE MIR -11 197 81 3 1117 525 394 49 12 chrX 69730830 69731159 -96919137 - L2 LINE L2 -338 3081 2741 3 1117 225 189 40 26 chrX 69731162 69731238 -96919058 + L1M2 LINE L1 3928 4004 -2142 3 1117 334 207 64 12 chrX 69731352 69731457 -96918839 + L1MB7 LINE L1 6069 6177 -1 3 1117 853 302 19 47 chrX 69731598 69732028 -96918268 + L1MA4 LINE L1 5479 5896 -404 3 1117 1337 272 72 31 chrX 69732023 69732665 -96917631 + L1M2 LINE L1 4784 5438 -730 3 1117 421 260 95 9 chrX 69732689 69732794 -96917502 + RSINE1 SINE B4 43 156 -9 3 1117 445 246 106 5 chrX 69732876 69733064 -96917232 + L1MA8 LINE L1 6082 6288 -3 3 1117 753 114 0 0 chrX 69733384 69733498 -96916798 + (GGAA)n Simple_repeat Simple_repeat 4 117 0 3 1117 798 327 73 18 chrX 69733928 69734270 -96916026 + MLT1A0 LTR MaLR 4 364 -1 3 1117 1851 107 38 35 chrX 69734839 69735158 -96915138 - Lx LINE L1 -2 6652 6333 3 1117 4094 45 1 1 chrX 69736656 69737369 -96912927 - L1Md_F2 LINE L1 -499 6085 5373 3 1117 3789 31 51 0 chrX 69737369 69737822 -96912474 + L1Md_F2 LINE L1 6093 6568 -14 3 1117 331 269 0 13 chrX 69738201 69738280 -96912016 + MIRb SINE MIR 176 253 -15 3 1117 282 370 83 71 chrX 69738773 69739026 -96911270 + MLT1J2 LTR MaLR 137 392 -56 3 1117 884 238 19 9 chrX 69739121 69739333 -96910963 - B3 SINE B2 0 216 3 3 1117 285 284 111 0 chrX 69739340 69739421 -96910875 - PB1D10 SINE Alu -5 112 23 3 1117 207 222 0 0 chrX 69740437 69740518 -96909778 + (TA)n Simple_repeat Simple_repeat 2 82 0 3 1117 640 265 8 0 chrX 69740548 69740680 -96909616 + B1_Mur1 SINE Alu 12 144 -5 3 1117 1373 216 0 26 chrX 69740752 69740957 -96909339 + MTD LTR MaLR 1 204 -215 3 1117 5294 128 5 45 chrX 69740957 69741847 -96908449 + Lx3B LINE L1 6115 6968 -5 3 1117 387 0 0 0 chrX 69741851 69741894 -96908402 + (TAA)n Simple_repeat Simple_repeat 3 45 0 3 1117 1373 239 1 39 chrX 69741894 69741977 -96908319 + MTD LTR MaLR 192 272 -128 3 1117 444 37 0 0 chrX 69742360 69742414 -96907882 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 1117 250 246 0 62 chrX 69742469 69742534 -96907762 - U6 snRNA snRNA -45 62 2 3 1117 495 252 92 59 chrX 69743259 69743411 -96906885 - B3A SINE B2 0 198 42 3 1117 191 268 68 27 chrX 69743995 69744068 -96906228 + MIRb SINE MIR 119 194 -68 3 1117 682 283 159 71 chrX 69744383 69744568 -96905728 - MTE-int LTR MaLR -9 1571 1206 3 1117 3949 64 17 11 chrX 69744568 69745106 -96905190 - L1Md_F2 LINE L1 -12 6570 6030 3 1117 682 334 129 66 chrX 69745106 69745235 -96905061 - MTE-int LTR MaLR -165 1205 1070 3 1117 2616 71 6 0 chrX 69745235 69745585 -96904711 - L1_Mus3 LINE L1 0 6638 6287 3 1117 832 335 127 61 chrX 69745585 69745991 -96904305 - MTE-int LTR MaLR -409 1171 701 3 1117 515 116 20 4 chrX 69746244 69746334 -96903962 - ORR1C2 LTR MaLR -2 382 276 3 1117 224 291 38 12 chrX 69747068 69747148 -96903148 - B4 SINE B4 -201 91 10 3 1117 325 337 94 24 chrX 69747391 69747676 -96902620 + L1MEg LINE L1 1032 1333 -4751 3 1117 1604 78 9 13 chrX 69747676 69747909 -96902387 + L1_Mus2 LINE L1 6334 6565 -1 3 1117 325 337 94 24 chrX 69747909 69747921 -96902375 + L1MEg LINE L1 1334 1349 -4735 3 1117 807 142 0 0 chrX 69747923 69748057 -96902239 + (GGAA)n Simple_repeat Simple_repeat 3 136 0 3 1117 214 368 33 40 chrX 69748318 69748468 -96901828 + L2a LINE L2 3278 3426 0 3 1117 1577 43 0 0 chrX 69748685 69748873 -96901423 + B2_Mm1a SINE B2 1 188 -5 3 1117 686 261 9 84 chrX 69749245 69749541 -96900755 - L1M2 LINE L1 -1426 4717 4437 3 1117 254 306 75 19 chrX 69749538 69749698 -96900598 + Lx9 LINE L1 7367 7535 -109 3 1117 281 205 121 0 chrX 69750466 69750549 -96899747 + L1MA5 LINE L1 6208 6300 0 3 1117 209 368 26 26 chrX 69750552 69750630 -96899666 - L2 LINE L2 -667 2752 2675 3 1117 307 132 0 0 chrX 69750888 69750941 -96899355 - L1_Mur3 LINE L1 -469 5411 5359 3 1117 29 28 0 0 chrX 69750967 69751003 -96899293 + AT_rich Low_complexity Low_complexity 1 36 0 3 1117 1470 65 0 5 chrX 69751010 69751196 -96899100 - B2_Mm2 SINE B2 -9 186 2 3 1117 277 188 31 0 chrX 69751559 69751623 -96898673 + Lx6 LINE L1 7384 7449 -11 3 1117 2430 58 3 0 chrX 69751646 69751958 -96898338 + L1_Mus1 LINE L1 6255 6567 0 4 1117 450 250 92 0 chrX 69751991 69752111 -96898185 + RSINE1 SINE B4 2 132 -33 4 1117 235 191 28 0 chrX 69752326 69752388 -96897908 + L1M2 LINE L1 5517 5584 -589 4 1117 5008 69 7 24 chrX 69752454 69753136 -96897160 + Lx3_Mus LINE L1 6316 6986 -23 4 1117 216 0 0 0 chrX 69753136 69753160 -96897136 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 4 1117 2629 50 8 71 chrX 69754838 69755205 -96895091 - ORR1A1 LTR MaLR -2 344 1 4 1117 186 43 0 0 chrX 69755239 69755262 -96895034 + (CAA)n Simple_repeat Simple_repeat 3 25 0 4 1117 251 265 132 0 chrX 69756018 69756101 -96894195 + B4A SINE B4 3 96 -196 4 1117 239 323 58 43 chrX 69757249 69757388 -96892908 + MLT1J2 LTR MaLR 267 407 -41 4 1117 244 184 0 84 chrX 69757480 69757563 -96892733 + T-rich Low_complexity Low_complexity 2 77 0 4 1117 309 51 0 0 chrX 69757563 69757602 -96892694 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 4 1117 830 141 52 7 chrX 69757603 69757739 -96892557 - B1_Mur3 SINE Alu 0 149 8 4 1117 5834 97 69 3 chrX 69757861 69758732 -96891564 + L1_Mus3 LINE L1 5708 6635 -3 4 1117 343 307 84 30 chrX 69758738 69758869 -96891427 - MLT1A0 LTR MaLR -8 400 263 4 1117 3050 39 8 37 chrX 69758870 69759272 -96891024 - RLTR10 LTR ERVK 0 390 1 4 1117 8779 20 0 3 chrX 69759272 69760273 -96890023 - RLTR10-int LTR ERVK 0 1987 990 4 1117 332 279 31 8 chrX 69760355 69760485 -96889811 - RLTR10-int LTR ERVK -5987 1594 1462 4 1117 8071 39 2 3 chrX 69760549 69761519 -96888777 - RLTR10-int LTR ERVK -989 998 1 4 1117 3050 39 8 37 chrX 69761519 69761921 -96888375 - RLTR10 LTR ERVK 0 390 1 4 1117 472 347 96 5 chrX 69761925 69762122 -96888174 - MLT1A0 LTR MaLR -150 215 1 4 1117 2557 81 25 0 chrX 69763243 69763603 -96886693 - L1_Mus3 LINE L1 -7 6631 6263 4 1117 261 0 0 0 chrX 69764753 69764782 -96885514 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1117 510 17 0 0 chrX 69764782 69764840 -96885456 + (TATATG)n Simple_repeat Simple_repeat 5 63 0 4 1117 13824 102 29 25 chrX 69765201 69768052 -96882244 + L1VL4 LINE L1 203 3050 -509 4 1117 793 132 7 13 chrX 69768052 69768205 -96882091 + Lx LINE L1 6501 6652 -2 4 1117 1574 83 9 5 chrX 69768909 69769128 -96881168 - L1Md_F2 LINE L1 -7 6575 6356 4 1117 412 99 14 14 chrX 69769128 69769168 -96881128 + (GAA)n Simple_repeat Simple_repeat 2 41 0 4 1117 1299 17 0 33 chrX 69769168 69769352 -96880944 + (GGA)n Simple_repeat Simple_repeat 3 180 0 4 1117 412 99 14 14 chrX 69769352 69769383 -96880913 + (GAA)n Simple_repeat Simple_repeat 3 34 0 4 1117 371 296 110 27 chrX 69769767 69770275 -96880021 + L1ME1 LINE L1 5493 6067 -112 4 1117 218 292 17 72 chrX 69770504 69770619 -96879677 - MIRc SINE MIR -95 173 58 4 1117 1982 203 31 7 chrX 69770716 69771133 -96879163 - L1_Mur2 LINE L1 -182 5695 5269 4 1117 6074 88 12 17 chrX 69771132 69772054 -96878242 + MusHAL1 LINE L1 666 1582 -1130 4 1117 2725 136 2 225 chrX 69772049 69772835 -96877461 + L1_Mm LINE L1 4265 4875 -1008 4 1117 15697 20 0 0 chrX 69772846 69775280 -96875016 - L1Md_A LINE L1 -74 6508 4075 4 1117 936 168 0 0 chrX 69775272 69775439 -96874857 + L1_Mm LINE L1 4862 5028 -855 4 1117 25 0 0 0 chrX 69775663 69775688 -96874608 + AT_rich Low_complexity Low_complexity 1 25 0 4 1117 706 224 13 20 chrX 69775856 69776006 -96874290 + B1_Mur3 SINE Alu 1 149 0 4 1117 405 239 61 9 chrX 69776238 69776352 -96873944 + PB1D9 SINE Alu 1 120 0 4 1117 505 348 83 33 chrX 69776527 69776890 -96873406 + L1M4b LINE L1 93 473 -6861 4 1117 558 0 0 0 chrX 69777267 69777329 -96872967 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 1117 940 290 25 72 chrX 69777338 69777617 -96872679 - B4A SINE B4 -22 270 5 4 1117 515 316 0 0 chrX 69778398 69778537 -96871759 + B1_Mur2 SINE Alu 3 141 -8 4 1117 235 56 28 0 chrX 69778546 69778582 -96871714 + L1M2 LINE L1 3898 3934 -2209 4 1117 351 0 0 0 chrX 69778602 69778641 -96871655 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 1117 1473 293 101 40 chrX 69778643 69779626 -96870670 + L1M4b LINE L1 4878 5920 -1083 4 1117 2648 309 81 36 chrX 69779762 69779929 -96870367 + Lx8 LINE L1 6219 6381 -1092 4 1117 3336 39 7 7 chrX 69779929 69780342 -96869954 + L1Md_F3 LINE L1 6160 6572 -12 4 1117 2648 309 81 36 chrX 69780342 69781375 -96868921 + Lx8 LINE L1 6382 7473 0 4 1117 261 275 14 84 chrX 69781542 69781685 -96868611 - L1M2 LINE L1 -3214 2929 2797 4 1117 682 286 12 12 chrX 69781796 69781969 -96868327 + B4 SINE B4 35 207 -85 4 1117 189 0 0 0 chrX 69782000 69782021 -96868275 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 1117 1473 0 11 6 chrX 69782021 69782198 -96868098 + (GA)n Simple_repeat Simple_repeat 2 180 0 4 1117 21 57 0 0 chrX 69782497 69782532 -96867764 + AT_rich Low_complexity Low_complexity 1 35 0 4 1117 353 350 40 126 chrX 69782681 69783158 -96867138 - L1MEc LINE L1 -5960 440 5 4 1117 353 54 0 0 chrX 69783329 69783385 -96866911 - Lx LINE L1 -5 6649 6594 4 1117 452 298 150 55 chrX 69783969 69784648 -96865648 + L1MC4 LINE L1 6612 7355 -687 4 1117 539 197 19 13 chrX 69784666 69784820 -96865476 + (CATA)n Simple_repeat Simple_repeat 4 158 0 4 1117 419 294 163 25 chrX 69785995 69786197 -96864099 + RMER21B LTR ERV1 339 568 -274 4 1117 2818 88 30 5 chrX 69786226 69786627 -96863669 + RLTR10A LTR ERVK 1 411 0 4 1117 529 326 37 33 chrX 69786663 69786904 -96863392 + Lx8 LINE L1 7173 7414 -59 4 1117 527 284 157 5 chrX 69787613 69787948 -96862348 - Lx9 LINE L1 -27 7617 7132 4 1117 24 0 0 0 chrX 69788051 69788075 -96862221 + AT_rich Low_complexity Low_complexity 1 24 0 4 1117 207 0 0 0 chrX 69788975 69788998 -96861298 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 1117 432 0 0 0 chrX 69788998 69789045 -96861251 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 1117 729 212 7 14 chrX 69789048 69789196 -96861100 - RMER21B LTR ERV1 -644 198 52 4 1117 447 218 0 0 chrX 69789372 69789450 -96860846 - B3A SINE B2 -118 80 3 4 1117 7247 36 15 6 chrX 69789574 69790467 -96859829 + L1Md_F2 LINE L1 5670 6570 -12 4 1117 291 394 29 9 chrX 69790622 69790727 -96859569 - PB1D10 SINE Alu -8 109 3 4 1117 306 313 0 0 chrX 69790661 69790728 -96859568 - ID_B1 SINE B4 -75 149 83 4 1117 952 233 133 30 chrX 69791220 69791615 -96858681 - RMER15 LTR ERVL -71 504 27 4 1117 211 296 121 24 chrX 69791944 69792027 -96858269 - MER5A DNA MER1_type -22 167 77 4 1117 341 305 93 31 chrX 69792633 69792826 -96857470 + Tigger15a DNA TcMar 474 678 -37 4 1117 3429 138 83 12 chrX 69792920 69793520 -96856776 + Lx LINE L1 6012 6654 0 4 1117 6928 100 13 12 chrX 69793850 69795492 -96854804 + L1_Mus3 LINE L1 4868 6507 -131 4 1117 573 15 0 0 chrX 69795631 69795697 -96854599 + (TC)n Simple_repeat Simple_repeat 1 66 0 4 1117 963 99 40 0 chrX 69795736 69795887 -96854409 + L1_Mus4 LINE L1 6477 6633 -3 4 1117 744 241 178 16 chrX 69796091 69796409 -96853887 + Lx9 LINE L1 7105 7474 -170 4 1117 34 24 0 0 chrX 69796522 69796563 -96853733 + AT_rich Low_complexity Low_complexity 1 41 0 4 1117 252 143 0 0 chrX 69796940 69796982 -96853314 + (ATG)n Simple_repeat Simple_repeat 2 43 0 4 1117 689 241 70 10 chrX 69798514 69798715 -96851581 + B3 SINE B2 1 213 -3 4 1117 5042 107 46 0 chrX 69799222 69800218 -96850078 + L1Md_F LINE L1 401 1450 -4433 4 1117 4679 90 6 3 chrX 69800218 69800879 -96849417 + L1_Mus1 LINE L1 5904 6566 -1 4 1117 4276 85 34 14 chrX 69800892 69801511 -96848785 + L1Md_F2 LINE L1 5933 6563 -19 4 1117 511 264 25 7 chrX 69802607 69802785 -96847511 - L1M2 LINE L1 -597 5703 5519 4 1117 680 283 241 26 chrX 69802787 69803281 -96847015 + L1MA4 LINE L1 5108 5707 -593 4 1117 311 0 22 0 chrX 69803290 69803335 -96846961 - L1_Mus1 LINE L1 -1 6566 6521 4 1117 1196 99 30 12 chrX 69803335 69803529 -96846767 - IAPEY2_LTR LTR ERVK -19 417 205 4 1117 5644 109 15 3 chrX 69803529 69804382 -96845914 - L1Md_F LINE L1 -591 5292 4430 4 1117 4538 148 23 54 chrX 69804378 69805600 -96844696 - L1Md_F LINE L1 -4443 1440 222 4 1117 610 293 46 39 chrX 69805670 69805976 -96844320 + L1MA4 LINE L1 5710 6016 -284 4 1117 238 220 17 0 chrX 69806255 69806314 -96843982 + L1MA4 LINE L1 6074 6133 -38 4 1117 573 218 0 107 chrX 69806317 69806466 -96843830 + B1_Mur2 SINE Alu 6 138 -11 4 1117 1347 67 0 0 chrX 69806466 69806645 -96843651 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 4 1117 392 335 37 27 chrX 69807533 69807720 -96842576 + L2a LINE L2 2496 2684 -735 4 1117 382 0 0 0 chrX 69807736 69807781 -96842515 + MusHAL1 LINE L1 1957 2001 -711 4 1117 2710 162 40 33 chrX 69807781 69808330 -96841966 + RLTR31_Mm LTR ERVK 1 553 -8 4 1117 1810 90 39 23 chrX 69808331 69808637 -96841659 + MusHAL1 LINE L1 1990 2300 -412 4 1117 9543 132 4 3 chrX 69808634 69811078 -96839218 + Lx LINE L1 4208 6654 0 4 1117 211 337 61 0 chrX 69811106 69811204 -96839092 + L2a LINE L2 2770 2873 -546 4 1117 180 0 0 0 chrX 69811273 69811293 -96839003 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 1117 341 220 42 8 chrX 69811293 69811412 -96838884 + Lx9 LINE L1 7521 7643 -1 4 1117 324 376 60 15 chrX 69811654 69811854 -96838442 + L2a LINE L2 2938 3146 -280 4 1117 536 309 20 20 chrX 69811943 69812095 -96838201 - MER2 DNA MER2_type -6 339 188 4 1117 252 184 0 0 chrX 69812095 69812144 -96838152 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1117 365 305 102 28 chrX 69812275 69812383 -96837913 - MER2 DNA MER2_type -229 116 1 4 1117 475 75 9 62 chrX 69812583 69812696 -96837600 + L1Md_F2 LINE L1 6475 6581 -1 4 1117 446 286 142 7 chrX 69814062 69814203 -96836093 + B3 SINE B2 1 160 -56 4 1117 370 333 106 36 chrX 69814975 69815249 -96835047 + L1MEd LINE L1 528 820 -5299 4 1117 6136 212 45 52 chrX 69815558 69817053 -96833243 + Lx7 LINE L1 6211 7696 0 4 1117 23 92 0 0 chrX 69817111 69817176 -96833120 + AT_rich Low_complexity Low_complexity 1 65 0 4 1117 269 314 0 0 chrX 69817567 69817653 -96832643 - L1M4 LINE L1 -1135 5011 4926 4 1117 1222 239 114 0 chrX 69817656 69817990 -96832306 - ORR1D1 LTR MaLR 0 374 3 4 1117 250 225 53 63 chrX 69818016 69818111 -96832185 + ORR1C2 LTR MaLR 5 98 -286 4 1117 31750 37 0 0 chrX 69818192 69823327 -96826969 + L1Md_T LINE L1 1 5178 -708 5 1117 35371 36 1 1 chrX 69823328 69829391 -96820905 + L1Md_T LINE L1 1 5589 -297 5 1117 8990 5 0 0 chrX 69829391 69830387 -96819909 + L1Md_T LINE L1 5590 6585 0 5 1117 3683 16 0 0 chrX 69830394 69830819 -96819477 + L1Md_T LINE L1 5165 5589 -297 5 1117 9005 4 0 0 chrX 69830819 69831815 -96818481 + L1Md_T LINE L1 5590 6585 0 5 1117 831 191 60 28 chrX 69832080 69832296 -96818000 - L1M2 LINE L1 -1277 4866 4644 5 1117 324 299 52 37 chrX 69832396 69832587 -96817709 + L1M2 LINE L1 3748 3941 -2199 5 1117 995 251 69 112 chrX 69832599 69833226 -96817070 + L1M2 LINE L1 4037 4636 -1507 5 1117 1588 41 0 5 chrX 69833657 69833851 -96816445 + B2_Mm1t SINE B2 1 193 0 5 1117 303 28 0 0 chrX 69833861 69833897 -96816399 + (A)n Simple_repeat Simple_repeat 1 36 0 5 1117 279 0 0 0 chrX 69833918 69833949 -96816347 + (TTA)n Simple_repeat Simple_repeat 3 33 0 5 1117 1787 130 0 17 chrX 69833949 69834239 -96816057 - L1Md_F2 LINE L1 -24 6558 6274 5 1117 785 116 0 0 chrX 69834238 69834369 -96815927 - L1_Mm LINE L1 -1107 4776 4640 5 1117 1792 55 13 0 chrX 69834383 69834621 -96815675 + L1Md_F2 LINE L1 6342 6582 0 5 1117 5022 46 0 0 chrX 69835792 69836403 -96813893 + L1Md_T LINE L1 5972 6582 0 5 1117 314 330 32 11 chrX 69838006 69838101 -96812195 + B3 SINE B2 88 184 -32 5 1117 219 69 0 0 chrX 69838105 69838134 -96812162 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1117 5008 55 28 1 chrX 69838512 69839167 -96811129 - L1Md_F2 LINE L1 -381 5502 4831 5 1117 706 70 0 0 chrX 69839156 69839242 -96811054 + L1Md_F2 LINE L1 5501 5586 -297 5 1117 8030 52 2 0 chrX 69839242 69840234 -96810062 + L1Md_F2 LINE L1 5587 6580 -2 5 1117 314 253 11 21 chrX 69840445 69840538 -96809758 + MLT1A1 LTR MaLR 305 396 -12 5 1117 438 286 183 22 chrX 69840557 69840786 -96809510 + MLT1C LTR MaLR 137 402 -65 5 1117 258 255 131 47 chrX 69841269 69841376 -96808920 + B4A SINE B4 145 260 -32 5 1117 360 0 0 0 chrX 69841376 69841416 -96808880 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1117 465 19 0 0 chrX 69841416 69841469 -96808827 + (GA)n Simple_repeat Simple_repeat 2 55 0 5 1117 368 40 20 0 chrX 69841515 69841565 -96808731 + (TATG)n Simple_repeat Simple_repeat 4 54 0 5 1117 2023 98 50 16 chrX 69841591 69841914 -96808382 + Lx LINE L1 6321 6654 0 5 1117 733 217 31 12 chrX 69842050 69842213 -96808083 + Lx9 LINE L1 7041 7206 -438 5 1117 2016 78 21 0 chrX 69842528 69842811 -96807485 + Lx2 LINE L1 5791 6079 -918 5 1117 639 327 78 50 chrX 69842987 69843411 -96806885 + MLT1E2 LTR MaLR 27 499 -128 5 1117 315 0 0 0 chrX 69844717 69844752 -96805544 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1117 483 306 136 26 chrX 69844795 69845104 -96805192 + ORR1E LTR MaLR 15 379 0 5 1117 504 296 45 19 chrX 69845548 69845703 -96804593 + RSINE1 SINE B4 5 163 -2 5 1117 290 188 0 0 chrX 69846300 69846348 -96803948 - B4A SINE B4 -6 286 239 5 1117 1130 304 43 19 chrX 69846549 69847035 -96803261 + L1MC2 LINE L1 5394 5891 -453 5 1117 364 218 241 6 chrX 69847167 69847333 -96802963 + L1MC2 LINE L1 6138 6342 -2 5 1117 332 221 0 40 chrX 69847330 69847429 -96802867 + L1MD2 LINE L1 5882 5976 -383 5 1117 624 239 14 0 chrX 69847904 69848042 -96802254 + Lx7 LINE L1 6973 7112 -584 5 1117 257 333 0 0 chrX 69848103 69848178 -96802118 + Lx7 LINE L1 7141 7215 -481 5 1117 505 292 35 0 chrX 69848180 69848324 -96801972 + B1F SINE Alu 1 149 0 5 1117 309 324 47 56 chrX 69848368 69848728 -96801568 + L1M2 LINE L1 2879 3235 -2908 5 1117 630 275 110 3 chrX 69848790 69849100 -96801196 + L1M5 LINE L1 3353 3695 -2451 5 1117 11091 187 261 24 chrX 69849596 69850639 -96799657 + Lx5 LINE L1 984 2065 -3815 5 1117 213 94 0 0 chrX 69850639 69850671 -96799625 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1117 11091 186 239 16 chrX 69850671 69854491 -96795805 + Lx5 LINE L1 2066 7045 -5 5 1117 295 206 0 0 chrX 69854634 69854707 -96795589 + L1M5 LINE L1 3813 3885 -2261 5 1117 1027 288 46 25 chrX 69854709 69854920 -96795376 + B4A SINE B4 6 218 -74 5 1117 309 51 0 0 chrX 69854920 69854959 -96795337 + (ATTG)n Simple_repeat Simple_repeat 2 40 0 5 1117 1027 288 46 25 chrX 69854959 69855028 -96795268 + B4A SINE B4 219 291 -1 5 1117 3128 59 2 14 chrX 69855141 69855556 -96794740 + L1Md_F3 LINE L1 6173 6582 -2 5 1117 343 321 78 31 chrX 69855618 69855811 -96794485 + L1M5 LINE L1 3972 4173 -1973 5 1117 25 31 0 0 chrX 69855812 69855844 -96794452 + AT_rich Low_complexity Low_complexity 1 32 0 5 1117 3125 127 54 1 chrX 69856085 69856607 -96793689 + L1_Mur3 LINE L1 5202 5736 -144 5 1117 2491 194 53 14 chrX 69856628 69857139 -96793157 + Lx6 LINE L1 6230 6760 -700 5 1117 809 95 0 0 chrX 69857142 69857247 -96793049 + U6 snRNA snRNA 2 106 -1 5 1117 4924 142 85 26 chrX 69857247 69858208 -96792088 + L1_Mm LINE L1 4354 5371 -512 5 139 36590 65 3 62 chrX 69858209 69864092 -96786204 + Lx2 LINE L1 99 5586 -297 5 1118 8014 56 0 0 chrX 69864092 69865088 -96785208 + L1Md_T LINE L1 5587 6582 0 5 1118 36590 80 16 22 chrX 69865088 69866371 -96783925 + Lx2 LINE L1 5587 6643 -354 5 1118 1375 132 0 9 chrX 69866371 69866593 -96783703 + Lx2 LINE L1 6775 6994 -3 5 1118 2460 213 44 10 chrX 69866606 69867128 -96783168 + Lx7 LINE L1 6755 7294 -402 5 1118 454 91 12 49 chrX 69867129 69867210 -96783086 - L1_Mur1 LINE L1 -819 5067 4990 5 1118 8280 38 0 3 chrX 69867206 69868381 -96781915 - L1Md_F3 LINE L1 0 6584 5412 5 1118 4142 48 0 0 chrX 69868378 69868893 -96781403 + L1Md_F3 LINE L1 4929 5443 -440 5 1118 2155 140 8 0 chrX 69868891 69869242 -96781054 - L1_Mm LINE L1 -882 5001 4648 5 1118 1572 112 56 0 chrX 69869242 69869491 -96780805 + Lx2 LINE L1 6733 6995 -2 5 1118 453 36 0 0 chrX 69869510 69869565 -96780731 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 1118 281 297 16 0 chrX 69869724 69869788 -96780508 - PB1D10 SINE Alu -40 77 13 5 1118 398 288 126 29 chrX 69870147 69870559 -96779737 + L1M5 LINE L1 2127 2578 -3568 5 1118 1884 53 0 8 chrX 69870912 69871158 -96779138 - L1Md_F3 LINE L1 0 6584 6341 5 1118 931 10 0 0 chrX 69871158 69871262 -96779034 + L1Md_F3 LINE L1 6269 6372 -212 5 1118 400 321 58 45 chrX 69871357 69871575 -96778721 - B4A SINE B4 -6 286 6 5 1118 335 287 19 29 chrX 69871579 69871683 -96778613 + RCHARR1 DNA MER1_type 1 103 -871 5 1118 345 296 82 0 chrX 69871689 69871787 -96778509 - RCHARR1 DNA MER1_type -759 215 110 5 1118 642 150 118 0 chrX 69871797 69871950 -96778346 + RCHARR1 DNA MER1_type 320 490 -484 5 1118 323 189 61 108 chrX 69871950 69872098 -96778198 + L1_Mur3 LINE L1 617 757 -6971 5 1118 4637 173 82 25 chrX 69872117 69873621 -96776675 + L1_Mur3 LINE L1 640 2239 -3641 5 1118 373 259 0 12 chrX 69873650 69873736 -96776560 + RCHARR1 DNA MER1_type 888 972 -2 5 1118 345 100 0 0 chrX 69873764 69873814 -96776482 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1118 2192 251 41 8 chrX 69873826 69874336 -96775960 - Lx6 LINE L1 -29 7431 6905 5 1118 336 225 11 0 chrX 69874346 69874435 -96775861 + Lx9 LINE L1 7542 7631 -13 5 1118 484 278 231 0 chrX 69874528 69874701 -96775595 - ID_B1 SINE B4 -11 213 1 5 1118 430 293 17 0 chrX 69874707 69874823 -96775473 - PB1D7 SINE Alu -1 119 2 5 1118 1029 250 80 24 chrX 69875036 69875577 -96774719 + L1M5 LINE L1 2738 3308 -2838 5 1118 477 0 0 0 chrX 69875587 69875640 -96774656 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 5 1118 3109 151 55 15 chrX 69876026 69876570 -96773726 - Lx2 LINE L1 0 6997 6432 5 1118 268 325 62 36 chrX 69876796 69876911 -96773385 + L2b LINE L2 3242 3409 -17 5 1118 387 60 60 0 chrX 69877140 69877207 -96773089 - Lx3_Mus LINE L1 -3 7006 6936 5 1118 480 301 11 23 chrX 69877665 69877842 -96772454 - MER104 DNA Tc2 -1 180 6 5 1118 220 167 259 0 chrX 69877856 69877910 -96772386 - MIR SINE MIR -39 223 156 5 1118 366 23 0 0 chrX 69879198 69879241 -96771055 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1118 363 380 19 87 chrX 69879915 69880224 -96770072 + L2 LINE L2 2665 2952 -467 5 1118 240 35 0 0 chrX 69882044 69882073 -96768223 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1118 1663 200 79 5 chrX 69882345 69882712 -96767584 - MTD LTR MaLR -14 405 12 5 1118 621 319 65 9 chrX 69882717 69882932 -96767364 - RMER15 LTR ERVL -55 520 294 5 1118 866 197 0 0 chrX 69883216 69883363 -96766933 + B1_Mur3 SINE Alu 2 148 -1 5 1118 11484 123 4 28 chrX 69883421 69885323 -96764973 - L1_Mm LINE L1 -1598 4285 2429 5 1118 627 305 93 15 chrX 69885545 69886187 -96764109 + L1M2 LINE L1 3275 4020 -2126 5 1118 7496 185 34 65 chrX 69886189 69889192 -96761104 + Lx4B LINE L1 4183 7058 0 5 1118 232 273 13 13 chrX 69889194 69889272 -96761024 + L1M2 LINE L1 4007 4084 -2056 5 1118 206 176 0 19 chrX 69889330 69889382 -96760914 + (TGGA)n Simple_repeat Simple_repeat 3 53 0 5 1118 416 306 11 32 chrX 69890289 69890478 -96759818 + L1M3e LINE L1 1827 2011 -5019 5 1118 596 288 89 11 chrX 69890474 69890755 -96759541 + L1M2 LINE L1 4660 4962 -1181 5 1118 410 240 16 75 chrX 69890758 69890893 -96759403 - MLT1A0 LTR MaLR -6 402 242 5 1118 269 220 0 0 chrX 69891087 69891137 -96759159 + (TCTCTG)n Simple_repeat Simple_repeat 1 50 0 5 1118 391 295 37 80 chrX 69891299 69891487 -96758809 - MLT-int LTR MaLR -1278 457 278 5 1118 371 349 59 0 chrX 69891500 69891652 -96758644 - MLT-int LTR MaLR -1573 162 2 5 1118 781 275 136 5 chrX 69892047 69892663 -96757633 + L1M2 LINE L1 4953 5648 -664 5 1118 363 262 0 105 chrX 69892653 69892815 -96757481 + L1MC2 LINE L1 5756 5900 -444 5 1118 307 189 179 125 chrX 69893004 69893071 -96757225 + Lx9 LINE L1 7409 7483 -161 5 1118 405 0 0 0 chrX 69893071 69893116 -96757180 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1118 307 189 179 125 chrX 69893116 69893192 -96757104 + Lx9 LINE L1 7484 7588 -56 5 1118 1102 96 0 0 chrX 69893192 69893338 -96756958 + B1_Mus2 SINE Alu 2 147 0 5 1118 307 189 179 125 chrX 69893338 69893358 -96756938 + Lx9 LINE L1 7589 7598 -46 5 1118 390 171 0 59 chrX 69893358 69893476 -96756820 + L1_Mus3 LINE L1 6528 6638 0 5 1118 307 189 179 125 chrX 69893476 69893534 -96756762 + Lx9 LINE L1 7599 7643 -1 5 1118 367 272 47 20 chrX 69893612 69893762 -96756534 + L1MC2 LINE L1 6051 6204 -140 5 1118 256 122 40 20 chrX 69893766 69893816 -96756480 + B1_Mur4 SINE Alu 99 149 -1 5 1118 332 246 161 60 chrX 69894167 69894366 -96755930 + L1M5 LINE L1 4784 5002 -1144 5 1118 22 0 0 0 chrX 69894667 69894689 -96755607 + AT_rich Low_complexity Low_complexity 1 22 0 5 1118 21 57 0 0 chrX 69894818 69894853 -96755443 + AT_rich Low_complexity Low_complexity 1 35 0 5 1118 204 219 0 0 chrX 69895302 69895343 -96754953 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1118 225 192 19 0 chrX 69895628 69895680 -96754616 + Lx7 LINE L1 7026 7078 -618 5 1118 221 340 0 69 chrX 69896850 69896951 -96753345 - MIR3 SINE MIR -7 201 108 5 1118 313 322 92 7 chrX 69898631 69898784 -96751512 + MER5A1 DNA MER1_type 1 166 0 5 1118 189 326 140 19 chrX 69898886 69899003 -96751293 - MIRb SINE MIR -120 148 10 5 1118 294 258 8 51 chrX 69900046 69900168 -96750128 + MIR SINE MIR 37 150 -112 5 1118 854 173 5 0 chrX 69901520 69901740 -96748556 + CT-rich Low_complexity Low_complexity 1 221 0 6 1118 944 236 14 0 chrX 69902758 69902966 -96747330 - B3 SINE B2 -4 212 2 6 1118 1187 62 69 0 chrX 69903514 69903674 -96746622 + L1_Mus2 LINE L1 6395 6565 -1 6 1118 463 336 92 28 chrX 69903717 69903934 -96746362 - MLT1C LTR MaLR -1 466 236 6 1118 286 262 139 9 chrX 69903985 69904093 -96746203 - MLT1C LTR MaLR -338 129 8 6 1118 433 0 35 0 chrX 69904956 69905013 -96745283 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 6 1118 597 311 117 31 chrX 69905038 69905546 -96744750 + L1MEf LINE L1 770 1354 -5046 6 1118 274 232 85 0 chrX 69905983 69906065 -96744231 + L1M3 LINE L1 5033 5121 -1019 6 1118 15611 75 9 24 chrX 69906065 69906468 -96743828 - L1_Mm LINE L1 -2117 3766 3374 6 1118 1371 80 21 0 chrX 69906468 69906656 -96743640 + B2_Mm2 SINE B2 2 193 -2 6 1118 15611 75 9 24 chrX 69906656 69906767 -96743529 - L1_Mm LINE L1 -2510 3373 3281 6 1118 3194 55 33 2 chrX 69906767 69907187 -96743109 - L1Md_F3 LINE L1 0 6584 6152 6 1118 15611 75 9 24 chrX 69907187 69909056 -96741240 - L1_Mm LINE L1 -2603 3280 1418 6 1118 368 329 140 21 chrX 69909061 69909347 -96740949 + L1MD LINE L1 4687 5006 -1140 6 1118 210 359 39 0 chrX 69909416 69909494 -96740802 - B4 SINE B4 -141 151 71 6 1118 255 291 0 0 chrX 69909494 69909580 -96740716 + L1M5 LINE L1 5632 5717 -727 6 1118 250 283 177 55 chrX 69909646 69909990 -96740306 + L1MEf LINE L1 3676 4061 -2258 6 1118 527 347 204 0 chrX 69910194 69910419 -96739877 + B4A SINE B4 22 292 0 6 1118 202 200 0 0 chrX 69910433 69910473 -96739823 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1118 4118 236 48 47 chrX 69910943 69912777 -96737519 + RMER1A Other Other 1 1020 -10 6 1118 5335 76 83 0 chrX 69912781 69913596 -96736700 - MusHAL1 LINE L1 0 2712 1830 6 1118 670 100 9 0 chrX 69913592 69913702 -96736594 - MusHAL1 LINE L1 -1190 1522 1412 6 1118 2234 242 58 132 chrX 69913721 69914351 -96735945 - RMER17B LTR ERVK -43 915 321 6 1118 3117 46 0 0 chrX 69914351 69914722 -96735574 + L1_Mus1 LINE L1 6196 6566 -1 6 1118 2234 242 58 132 chrX 69914722 69915080 -96735216 - RMER17B LTR ERVK -638 320 1 6 1118 9635 91 21 20 chrX 69915080 69916699 -96733597 - L1VL4 LINE L1 -1295 2264 614 6 1118 782 261 72 0 chrX 69916699 69916894 -96733402 - B3 SINE B2 -7 209 1 6 1118 3338 131 38 36 chrX 69916894 69916943 -96733353 - L1VL4 LINE L1 -5574 728 672 6 1118 318 301 0 0 chrX 69916943 69917016 -96733280 - B3A SINE B2 -125 73 1 6 1118 3338 131 38 36 chrX 69917016 69917556 -96732740 - L1VL4 LINE L1 -5574 671 34 6 1118 683 249 133 4 chrX 69917555 69917831 -96732465 + Lx8 LINE L1 5413 5700 -1773 6 1118 278 172 34 17 chrX 69917887 69917946 -96732350 - ORR1D1 LTR MaLR -48 326 267 6 1118 1625 248 59 13 chrX 69917946 69918334 -96731962 + MTD LTR MaLR 6 411 -8 6 1118 248 283 175 9 chrX 69918334 69918448 -96731848 + Lx8 LINE L1 6226 6358 -1115 6 1118 2348 289 90 38 chrX 69918469 69919070 -96731226 + Lx8 LINE L1 6328 6939 -534 6 1118 942 128 0 0 chrX 69919070 69919219 -96731077 + (TA)n Simple_repeat Simple_repeat 2 150 0 6 1118 2348 289 90 38 chrX 69919219 69919577 -96730719 + Lx8 LINE L1 6940 7336 -137 6 1118 331 314 44 136 chrX 69919581 69919898 -96730398 + L1M4 LINE L1 2154 2441 -3705 6 1118 376 202 9 69 chrX 69919967 69920083 -96730213 + L1M4 LINE L1 4605 4719 -1427 6 1118 585 0 0 0 chrX 69920247 69920312 -96729984 + (TA)n Simple_repeat Simple_repeat 1 65 0 6 1118 29 47 0 0 chrX 69921526 69921569 -96728727 + AT_rich Low_complexity Low_complexity 1 43 0 6 1118 22 0 0 0 chrX 69921752 69921774 -96728522 + AT_rich Low_complexity Low_complexity 1 22 0 6 1118 837 117 0 0 chrX 69921860 69921988 -96728308 + (GA)n Simple_repeat Simple_repeat 2 129 0 6 1118 2878 127 99 62 chrX 69922337 69922900 -96727396 + RLTR31A_Mm LTR ERVK 1 584 0 6 1118 240 268 47 95 chrX 69923319 69923488 -96726808 + YREP_Mm Unknown Unknown 135 295 -1517 6 1118 528 262 90 28 chrX 69923371 69923516 -96726780 - ID_B1 SINE B4 0 224 71 6 1118 526 283 0 55 chrX 69923661 69923807 -96726489 - B3 SINE B2 -6 210 73 6 1118 36277 30 0 0 chrX 69924543 69931031 -96719265 - L1Md_T LINE L1 0 6585 1 6 1118 276 216 122 0 chrX 69931034 69931108 -96719188 - L1MA4 LINE L1 -391 5909 5827 6 1118 402 21 0 0 chrX 69931547 69931594 -96718702 + (GA)n Simple_repeat Simple_repeat 1 47 0 6 1118 50 53 0 10 chrX 69931634 69931714 -96718582 + AT_rich Low_complexity Low_complexity 1 80 0 6 1118 291 54 0 0 chrX 69931714 69931751 -96718545 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1118 50 53 0 10 chrX 69931751 69931766 -96718530 + AT_rich Low_complexity Low_complexity 1 15 0 6 1118 1850 277 51 34 chrX 69931766 69932473 -96717823 + Lx9 LINE L1 6821 7539 -105 6 1118 1137 70 0 0 chrX 69932912 69933054 -96717242 + B1_Mus2 SINE Alu 1 142 -5 6 1118 192 77 0 0 chrX 69933054 69933080 -96717216 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 6 1118 5347 65 1 0 chrX 69933146 69933824 -96716472 - L1_Mus1 LINE L1 -3 6564 5886 6 1118 380 243 81 15 chrX 69933954 69934193 -96716103 - L1_Mur1 LINE L1 -820 5320 5006 6 1118 1372 221 116 6 chrX 69934205 69934559 -96715737 - Lx5 LINE L1 -54 6996 6604 6 1118 4590 156 48 70 chrX 69934559 69935469 -96714827 + RMER19B LTR ERVK 1 890 -12 6 1118 6909 148 69 18 chrX 69935482 69937581 -96712715 - Lx5 LINE L1 -441 6609 4385 6 1118 831 141 113 13 chrX 69937581 69937732 -96712564 - RLTR8 LTR ERVK 0 365 200 6 1118 3844 71 61 50 chrX 69937733 69938327 -96711969 - SRV_MM-int LTR ERVK -5567 600 1 6 1118 2445 99 8 40 chrX 69938327 69938704 -96711592 - RLTR8 LTR ERVK 0 365 1 6 1118 11878 130 44 189 chrX 69938704 69939638 -96710658 - Lx5 LINE L1 -1487 4390 3483 6 1118 315 0 0 0 chrX 69939638 69939673 -96710623 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1118 414 0 0 0 chrX 69939675 69939721 -96710575 + (GA)n Simple_repeat Simple_repeat 1 46 0 6 1118 11878 130 44 189 chrX 69939721 69940762 -96709534 - Lx5 LINE L1 -2395 3482 3003 6 1118 1378 47 0 0 chrX 69940762 69940933 -96709363 - L1Md_T LINE L1 -1 6581 6411 6 1118 11878 130 44 189 chrX 69940933 69941782 -96708514 - Lx5 LINE L1 -2875 3002 2054 6 1118 198 71 0 0 chrX 69941782 69941810 -96708486 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1118 11878 130 44 189 chrX 69941810 69941889 -96708407 - Lx5 LINE L1 -3824 2053 1986 6 1118 3235 130 17 0 chrX 69941889 69942372 -96707924 + Lx4A LINE L1 6567 7057 -1 6 1118 11878 120 40 152 chrX 69942372 69943282 -96707014 - Lx5 LINE L1 -3892 1985 1119 6 1118 5091 39 0 5 chrX 69943282 69943857 -96706439 - L1Md_T LINE L1 -1 6581 6010 6 1118 2791 210 69 35 chrX 69943857 69943935 -96706361 - Lx5 LINE L1 -5968 1118 1048 6 1118 5483 104 26 4 chrX 69943935 69944656 -96705640 - RMER19A LTR ERVK 0 737 1 6 1118 2791 210 69 35 chrX 69944656 69945062 -96705234 - Lx5 LINE L1 -6039 1047 607 6 1118 855 86 9 0 chrX 69945406 69945522 -96704774 + RLTR22_Mus LTR ERVK 1 117 -1691 6 1118 5807 106 62 18 chrX 69945532 69946439 -96703857 - RMER17B LTR ERVK -11 947 1 6 1118 4996 85 18 6 chrX 69946439 69947146 -96703150 + RLTR22_Mus LTR ERVK 110 825 -983 6 1118 515 274 44 74 chrX 69947390 69947619 -96702677 + RMER12 LTR ERVK 1101 1322 0 6 1118 190 318 161 7 chrX 69947807 69947962 -96702334 - L2 LINE L2 -1093 2326 2148 6 1118 411 347 96 36 chrX 69948030 69948448 -96701848 - L2 LINE L2 -1482 1937 1495 6 1118 2240 39 0 30 chrX 69949299 69949566 -96700730 - L1Md_F3 LINE L1 -1 6583 6325 6 1118 1928 19 0 0 chrX 69949566 69949780 -96700516 + L1Md_F2 LINE L1 5625 5838 -744 6 1118 3100 242 35 12 chrX 69949782 69950528 -96699768 - L1_Mur3 LINE L1 -928 4952 4196 6 1118 447 19 0 0 chrX 69950528 69950580 -96699716 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1118 3100 242 35 12 chrX 69950580 69950682 -96699614 - L1_Mur3 LINE L1 -1685 4195 4085 6 1118 303 258 0 0 chrX 69950927 69950993 -96699303 + Lx8 LINE L1 6952 7017 -456 6 1118 286 303 59 20 chrX 69951175 69951276 -96699020 - ORR1E LTR MaLR -229 130 26 6 1118 514 341 18 21 chrX 69951304 69951636 -96698660 + L1MEf LINE L1 1261 1591 -4609 6 1118 261 179 0 0 chrX 69952011 69952050 -96698246 + Lx9 LINE L1 6406 6444 -1200 6 1118 232 182 0 22 chrX 69952553 69952598 -96697698 - MER5A1 DNA MER1_type -4 162 119 6 1118 29 28 0 0 chrX 69952660 69952696 -96697600 + AT_rich Low_complexity Low_complexity 1 36 0 6 1118 2237 109 6 9 chrX 69952698 69953014 -96697282 - L1_Mus3 LINE L1 -7 6631 6317 6 1118 287 257 0 13 chrX 69953020 69953095 -96697201 - MER5A1 DNA MER1_type -90 76 3 6 1118 1965 99 101 14 chrX 69953271 69953485 -96696811 + L1Md_F2 LINE L1 6270 6481 -101 6 1118 195 69 0 0 chrX 69953485 69953514 -96696782 + (TGGG)n Simple_repeat Simple_repeat 1 29 0 6 1118 1965 99 101 14 chrX 69953514 69953586 -96696710 + L1Md_F2 LINE L1 6482 6581 -1 6 1118 30 27 0 0 chrX 69953668 69953705 -96696591 + AT_rich Low_complexity Low_complexity 1 37 0 6 1118 264 30 0 0 chrX 69953936 69953969 -96696327 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 6 1118 7860 77 2 12 chrX 69954198 69955258 -96695038 - Lx3_Mus LINE L1 -324 6685 5637 6 1118 2520 70 18 3 chrX 69955259 69955590 -96694706 + Lx3_Mus LINE L1 6666 7001 -8 6 1118 1797 101 27 0 chrX 69955656 69955913 -96694383 - Lx2A1 LINE L1 -9 6999 6736 6 1118 22 56 0 0 chrX 69956113 69956149 -96694147 + AT_rich Low_complexity Low_complexity 1 36 0 6 1118 459 103 31 0 chrX 69956208 69956305 -96693991 + (TA)n Simple_repeat Simple_repeat 1 100 0 6 1118 465 266 84 28 chrX 69956364 69956507 -96693789 - MLT1A0 LTR MaLR -214 151 1 6 1118 2385 312 52 24 chrX 69956721 69957588 -96692708 - Lx8 LINE L1 -337 7136 6246 6 1118 13185 111 2 22 chrX 69957590 69960056 -96690240 - L1Md_F LINE L1 -2787 3096 675 6 1118 230 305 9 45 chrX 69960032 69960142 -96690154 - L1Md_F LINE L1 -6352 264 159 6 1118 216 189 0 0 chrX 69960341 69960378 -96689918 - B4A SINE B4 -255 37 1 6 1118 303 336 34 8 chrX 69960434 69960636 -96689660 + L1MA10 LINE L1 5944 6313 -21 6 1118 216 0 0 0 chrX 69961251 69961275 -96689021 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 6 1118 1369 241 95 65 chrX 69962435 69962940 -96687356 + Lx9 LINE L1 6887 7406 -238 6 1118 4896 135 56 5 chrX 69963102 69963875 -96686421 + Lx3C LINE L1 6162 6973 -3 6 1118 332 311 86 0 chrX 69964016 69964167 -96686129 - L2a LINE L2 -4 3422 3259 6 1118 198 62 43 72 chrX 69964228 69964297 -96685999 + (TATAA)n Simple_repeat Simple_repeat 1 67 0 6 1118 1917 73 11 0 chrX 69964360 69964635 -96685661 + Lx3_Mus LINE L1 5997 6274 -735 6 1118 10503 68 22 0 chrX 69964667 69964781 -96685515 - Lx3_Mus LINE L1 0 7009 6873 6 1118 288 0 0 0 chrX 69964781 69964813 -96685483 + (CCCCCA)n Simple_repeat Simple_repeat 5 36 0 6 1118 10503 68 22 0 chrX 69964813 69966069 -96684227 - Lx3_Mus LINE L1 -137 6872 5610 6 1118 1720 162 46 118 chrX 69966083 69966474 -96683822 - RMER19B LTR ERVK -539 363 1 6 1118 215 338 221 7 chrX 69966474 69966614 -96683682 - L2a LINE L2 -388 3031 2862 6 1118 529 274 0 0 chrX 69966698 69966815 -96683481 - PB1D10 SINE Alu 0 117 1 6 1118 215 387 0 0 chrX 69967256 69967331 -96682965 - L2a LINE L2 -684 2735 2661 6 1118 406 276 85 47 chrX 69967358 69967487 -96682809 - ID_B1 SINE B4 -5 219 86 6 1118 3589 36 60 0 chrX 69967604 69968018 -96682278 - L1Md_F2 LINE L1 -2 6580 6142 6 1118 553 183 234 80 chrX 69968071 69968345 -96681951 + Lx9 LINE L1 7329 7644 0 6 1118 938 246 95 36 chrX 69968445 69968719 -96681577 + B4A SINE B4 1 290 -2 6 1118 325 314 0 9 chrX 69968776 69968882 -96681414 - Tigger9b DNA MER2_type -38 586 482 6 1118 8509 33 7 0 chrX 69968896 69969961 -96680335 - L1Md_F2 LINE L1 -1 6581 5510 7 1118 333 306 8 24 chrX 69969961 69970088 -96680208 - Tigger9b DNA MER2_type -182 442 318 6 1118 429 36 0 0 chrX 69970162 69970217 -96680079 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1118 245 254 106 45 chrX 69970271 69970337 -96679959 - RSINE1 SINE B4 -60 105 36 7 1118 508 316 35 24 chrX 69970507 69970796 -96679500 - L1M2 LINE L1 -4399 2450 2159 7 1118 1343 86 0 93 chrX 69971089 69971294 -96679002 - L1_Mus2 LINE L1 0 6566 6381 7 1118 514 32 0 0 chrX 69971303 69971365 -96678931 + L1_Mus2 LINE L1 6255 6316 -250 7 1118 396 123 49 0 chrX 69971441 69971522 -96678774 - L1MC LINE L1 -2419 5463 5379 7 1118 303 217 31 52 chrX 69971618 69971715 -96678581 - L2a LINE L2 0 3426 3332 7 1118 672 276 88 107 chrX 69971845 69972255 -96678041 + L1MA4 LINE L1 5513 5914 -386 7 1118 342 0 0 0 chrX 69972259 69972297 -96677999 + (TC)n Simple_repeat Simple_repeat 1 38 0 7 1118 866 239 61 5 chrX 69972362 69972560 -96677736 + B3 SINE B2 6 214 -2 7 1118 672 292 80 33 chrX 69972652 69972953 -96677343 - L1MD LINE L1 -709 5650 5336 7 1118 2185 167 37 43 chrX 69974966 69975240 -96675056 - RMER4A LTR ERVK 0 466 198 7 1118 5298 32 8 0 chrX 69975240 69975830 -96674466 - L1Md_F2 LINE L1 0 6582 5988 7 1118 2185 167 37 43 chrX 69975830 69976019 -96674277 - RMER4A LTR ERVK -269 197 6 7 1118 3214 61 201 2 chrX 69976099 69976526 -96673770 + RLTR1B LTR ERV1 1 512 0 7 1118 290 195 13 0 chrX 69976744 69976821 -96673475 + CT-rich Low_complexity Low_complexity 1 78 0 7 1118 321 397 0 8 chrX 69977728 69977742 -96672554 + ID_B1 SINE B4 68 193 -31 7 1118 409 345 18 0 chrX 69977742 69977855 -96672441 + B1F1 SINE Alu 1 115 -34 7 1118 447 92 0 0 chrX 69977856 69977921 -96672375 + (GA)n Simple_repeat Simple_repeat 1 65 0 7 1118 195 273 110 33 chrX 69978597 69978688 -96671608 - MIRb SINE MIR -110 158 61 7 1118 567 283 112 154 chrX 69978792 69979097 -96671199 + B4A SINE B4 1 292 0 7 1118 3702 174 148 32 chrX 69979273 69980108 -96670188 - Lx9 LINE L1 -24 7620 6689 7 1118 234 305 8 160 chrX 69980342 69980467 -96669829 + RMER2 LTR ERV1 298 403 -164 7 1118 649 188 16 20 chrX 69980466 69980599 -96669697 - RMER13B LTR ERVK -782 126 1 7 1118 529 305 73 42 chrX 69980884 69981354 -96668942 - L1MEg LINE L1 -3089 3057 2573 7 1118 245 273 140 34 chrX 69981337 69981515 -96668781 - L1MEg LINE L1 -4255 1987 1791 7 1118 244 211 53 0 chrX 69981549 69981606 -96668690 + RMER15 LTR ERVL 3 62 -513 7 1118 1299 161 40 22 chrX 69981632 69981854 -96668442 - URR1A DNA MER1_type 0 226 1 7 1118 1913 224 91 22 chrX 69981862 69982369 -96667927 + RMER15 LTR ERVL 32 573 -2 7 1118 876 269 202 15 chrX 69982399 69983004 -96667292 - L1MEg LINE L1 -4515 1727 1010 7 1118 248 322 58 19 chrX 69983027 69983182 -96667114 - L1MEg LINE L1 -5807 435 275 7 1118 3358 56 5 8 chrX 69984005 69984402 -96665894 + MTA_Mm LTR MaLR 1 396 0 7 1118 207 196 0 0 chrX 69984521 69984567 -96665729 + T-rich Low_complexity Low_complexity 1 46 0 7 1118 960 281 74 107 chrX 69985152 69985703 -96664593 - MT2A LTR ERVL 0 533 1 7 1118 276 362 40 13 chrX 69986098 69986249 -96664047 - L2 LINE L2 -640 2779 2625 7 1118 1305 86 64 46 chrX 69986256 69986689 -96663607 - RLTR6_Mm LTR ERV1 -70 584 37 7 1118 242 161 219 31 chrX 69986733 69986797 -96663499 - RLTR6_Mm LTR ERV1 -578 76 1 7 139 68219 14 15 1 chrX 69986797 69994465 -96655831 - RLTR6-int LTR ERV1 0 7778 1 7 1119 1312 89 61 44 chrX 69994466 69994919 -96655377 - RLTR6_Mm LTR ERV1 -50 604 37 7 1119 225 243 186 53 chrX 69994915 69995028 -96655268 - RLTR6_Mm LTR ERV1 -526 128 1 7 1119 199 390 26 37 chrX 69995070 69995259 -96655037 - L2 LINE L2 -834 2585 2399 7 1119 5740 107 46 18 chrX 69995592 69996580 -96653716 + L1VL2 LINE L1 97 1116 -2499 7 1119 3577 63 0 0 chrX 69996555 69996996 -96653300 + L1Md_F3 LINE L1 5146 5586 -297 7 1119 8809 30 4 8 chrX 69996996 69997894 -96652402 + L1Md_F3 LINE L1 5587 6488 -96 7 1119 3699 20 2 0 chrX 69997894 69998289 -96652007 - MTA_Mm LTR MaLR 0 396 1 7 1119 9797 33 2 1 chrX 69998289 69999386 -96650910 - MTA_Mm-int LTR MaLR 0 1098 1 7 1119 3699 20 2 0 chrX 69999386 69999781 -96650515 - MTA_Mm LTR MaLR 0 396 1 7 1119 8809 30 4 8 chrX 69999781 69999868 -96650428 + L1Md_F3 LINE L1 6489 6568 -16 7 1119 743 93 15 15 chrX 69999869 70000000 -96650296 + L1VL2 LINE L1 1087 1217 -2398 7 1119 17716 157 14 126 chrX 70000001 70004489 -96645807 + L1_Mur1 LINE L1 1518 5503 -380 1 1119 799 287 102 51 chrX 70004495 70004866 -96645430 + Lx9 LINE L1 6954 7343 -301 2 1119 297 286 24 0 chrX 70005057 70005141 -96645155 - L3 LINE CR1 -1092 3397 3312 3 1119 443 318 54 77 chrX 70005177 70005474 -96644822 + B4 SINE B4 3 292 0 4 1119 459 0 0 0 chrX 70005482 70005533 -96644763 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 1119 1937 86 96 0 chrX 70006082 70006373 -96643923 + ORR1A2 LTR MaLR 1 319 -8 6 1119 1851 158 152 0 chrX 70007683 70008025 -96642271 - ORR1B1 LTR MaLR 0 394 1 7 1119 222 37 0 0 chrX 70008287 70008314 -96641982 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 1119 414 39 0 0 chrX 70008314 70008365 -96641931 + (GA)n Simple_repeat Simple_repeat 2 53 0 9 1119 198 0 0 0 chrX 70008603 70008625 -96641671 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1 1119 235 355 62 69 chrX 70008672 70008817 -96641479 - RSINE1 SINE B4 -17 148 5 1 1119 328 326 43 22 chrX 70008848 70008986 -96641310 - B1F1 SINE Alu -6 143 3 1 1119 575 288 92 55 chrX 70009808 70010080 -96640216 - MLT1B LTR MaLR -2 678 397 1 1119 195 217 46 77 chrX 70010487 70010552 -96639744 + MER5A DNA MER1_type 16 78 -111 1 1119 715 318 19 0 chrX 70010554 70010708 -96639588 + RSINE1 SINE B4 7 163 -2 1 1119 363 193 0 0 chrX 70010724 70010812 -96639484 + (CA)n Simple_repeat Simple_repeat 2 89 0 1 1119 403 346 7 0 chrX 70010823 70010959 -96639337 + MER5A DNA MER1_type 53 189 0 1 1119 778 266 176 30 chrX 70011048 70011186 -96639110 - MLT1B LTR MaLR -44 346 181 1 1119 441 0 0 0 chrX 70011186 70011235 -96639061 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 1119 459 0 0 0 chrX 70011235 70011285 -96639011 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1119 778 266 176 30 chrX 70011285 70011447 -96638849 - MLT1B LTR MaLR -210 180 2 1 1119 262 302 16 0 chrX 70011840 70011903 -96638393 - LTR88b LTR Gypsy? -19 818 755 1 1119 21 0 0 0 chrX 70012531 70012552 -96637744 + AT_rich Low_complexity Low_complexity 1 21 0 2 1119 1325 265 21 48 chrX 70012593 70012930 -96637366 - MTE2a LTR MaLR -12 367 40 2 1119 303 244 158 0 chrX 70012913 70012995 -96637301 - MTE2a LTR MaLR -284 95 1 2 1119 632 294 8 38 chrX 70013054 70013294 -96637002 - L1MB2 LINE L1 -78 6093 5861 2 1119 611 259 50 13 chrX 70013490 70013729 -96636567 + L1M2 LINE L1 4643 4890 -1253 2 1119 6640 68 1 12 chrX 70013906 70014794 -96635502 + Lx3_Mus LINE L1 6132 7009 0 2 1119 234 0 0 0 chrX 70015130 70015156 -96635140 + (TC)n Simple_repeat Simple_repeat 2 27 0 2 1119 543 16 0 0 chrX 70015156 70015219 -96635077 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 1119 565 285 79 17 chrX 70015286 70015486 -96634810 - B4A SINE B4 -76 216 1 2 1119 216 170 0 0 chrX 70017273 70017326 -96632970 + A-rich Low_complexity Low_complexity 1 53 0 2 1119 954 274 72 23 chrX 70018453 70018715 -96631581 + MTEa LTR MaLR 55 329 -50 2 1119 704 262 0 21 chrX 70018796 70018983 -96631313 + Lx8 LINE L1 7089 7271 -202 3 1119 355 220 0 15 chrX 70019124 70019258 -96631038 + (TA)n Simple_repeat Simple_repeat 2 133 0 3 1119 4772 36 7 0 chrX 70019407 70019985 -96630311 - L1Md_F2 LINE L1 -3 6579 5998 3 1119 590 295 122 16 chrX 70020363 70020618 -96629678 + Lx9 LINE L1 7135 7416 -228 3 1119 422 65 16 0 chrX 70020677 70020739 -96629557 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1119 715 288 77 14 chrX 70021380 70021602 -96628694 - Tigger5 DNA MER2_type -2170 236 1 3 1119 640 336 147 14 chrX 70021775 70022203 -96628093 - L2a LINE L2 -9 3417 2933 3 1119 636 305 65 9 chrX 70022598 70022939 -96627357 - L5 LINE RTE -25 2240 1881 3 1119 229 255 20 0 chrX 70022945 70022996 -96627300 + GA-rich Low_complexity Low_complexity 4 55 0 3 1119 328 296 48 58 chrX 70023195 70023239 -96627057 + B4A SINE B4 43 85 -207 3 1119 581 244 9 0 chrX 70023239 70023354 -96626942 + PB1D10 SINE Alu 1 116 -1 4 1119 323 306 8 24 chrX 70023852 70023976 -96626320 - MLT1A1 LTR MaLR -280 128 7 4 1119 1271 287 68 19 chrX 70023984 70024692 -96625604 - L1ME1 LINE L1 -233 5946 5195 4 1119 4568 122 5 4 chrX 70024979 70025749 -96624547 - Lx2A1 LINE L1 -699 6309 5539 4 1119 4285 161 7 15 chrX 70025749 70026462 -96623834 + Lx2 LINE L1 6290 6996 -1 4 1119 477 265 50 15 chrX 70026468 70026667 -96623629 - L1ME1 LINE L1 -1294 4852 4647 4 1119 324 320 0 1 chrX 70026670 70026751 -96623545 - B1F SINE Alu -21 99 20 4 1119 448 305 103 50 chrX 70027205 70027720 -96622576 - L1ME1 LINE L1 -1598 4548 4007 4 1119 371 257 28 42 chrX 70027778 70027920 -96622376 + L1MEd LINE L1 14 153 -5966 4 1119 964 170 116 11 chrX 70028368 70028558 -96621738 - B3 SINE B2 -6 210 1 4 1119 219 271 113 48 chrX 70028594 70028718 -96621578 + L2 LINE L2 2603 2734 -685 4 1119 280 304 48 29 chrX 70029330 70029435 -96620861 - L2c LINE L2 -4 3383 3277 4 1119 248 365 47 13 chrX 70030558 70030708 -96619588 + LTR16B1 LTR ERVL 187 341 -139 5 1119 674 233 0 15 chrX 70031401 70031532 -96618764 + 7SK RNA RNA 1 129 -202 5 1119 469 88 12 12 chrX 70032019 70032100 -96618196 + (CA)n Simple_repeat Simple_repeat 1 81 0 5 1119 3057 156 67 9 chrX 70032238 70032789 -96617507 - RMER4B LTR ERVK 0 585 3 5 1119 513 211 46 77 chrX 70033685 70033880 -96616416 + Lx9 LINE L1 7383 7571 -73 5 1119 58 38 0 0 chrX 70033880 70033959 -96616337 + AT_rich Low_complexity Low_complexity 1 79 0 5 1119 330 292 8 50 chrX 70034848 70034967 -96615329 - MIRc SINE MIR -64 204 91 5 1119 251 297 92 124 chrX 70037106 70037379 -96612917 + ORR1E LTR MaLR 96 359 0 5 1119 826 295 35 11 chrX 70038172 70038456 -96611840 + B4A SINE B4 1 291 -1 5 1119 5066 51 25 12 chrX 70038676 70039322 -96610974 + RLTR13D1 LTR ERVK 1 650 -156 5 1119 207 0 0 0 chrX 70039322 70039345 -96610951 + (TA)n Simple_repeat Simple_repeat 2 24 0 6 1119 5066 156 84 13 chrX 70039345 70039479 -96610817 + RLTR13D1 LTR ERVK 651 680 -126 5 1119 1641 152 131 27 chrX 70039576 70039989 -96610307 + L1_Mur3 LINE L1 2541 2996 -2881 6 1119 3276 48 0 0 chrX 70039997 70040415 -96609881 - Lx3_Mus LINE L1 -64 6945 6528 6 1119 2272 97 103 39 chrX 70040426 70040833 -96609463 + L1_Mur3 LINE L1 2989 3433 -2447 6 1119 4135 40 76 17 chrX 70040833 70041362 -96608934 - LTRIS2 LTR ERV1 0 564 5 6 1119 2272 97 103 39 chrX 70041362 70041438 -96608858 + L1_Mur3 LINE L1 3434 3503 -2377 6 1119 216 324 42 14 chrX 70041560 70041581 -96608715 - B4A SINE B4 -135 157 120 6 1119 250 147 0 0 chrX 70041581 70041615 -96608681 - PB1D7 SINE Alu -70 50 17 6 1119 216 324 42 14 chrX 70041615 70041632 -96608664 - B4A SINE B4 -135 119 84 6 1119 22 56 0 0 chrX 70041832 70041868 -96608428 + AT_rich Low_complexity Low_complexity 1 36 0 6 1119 529 205 136 24 chrX 70042014 70042139 -96608157 + B1_Mur4 SINE Alu 3 141 -9 6 1119 2720 152 21 0 chrX 70042204 70042685 -96607611 + L1_Mur2 LINE L1 3487 3977 -1900 6 1119 555 68 0 0 chrX 70042685 70042758 -96607538 + B2_Mm2 SINE B2 3 75 -120 6 1119 729 51 5 0 chrX 70042733 70042847 -96607449 - ORR1A0 LTR MaLR -229 117 1 7 1119 952 114 13 0 chrX 70042848 70043006 -96607290 + L1_Mur2 LINE L1 4324 4483 -1403 6 1119 446 88 15 0 chrX 70043007 70043075 -96607221 + (CATA)n Simple_repeat Simple_repeat 4 72 0 7 1119 414 217 0 46 chrX 70043103 70043190 -96607106 - RMER15 LTR ERVL -7 568 486 7 1119 974 205 69 9 chrX 70044449 70044680 -96605616 + Lx7 LINE L1 7096 7340 -356 7 1119 1839 217 87 40 chrX 70044701 70045324 -96604972 + L1Md_F LINE L1 288 939 -5580 7 1119 2613 29 0 0 chrX 70045350 70045666 -96604630 + L1Md_T LINE L1 5271 5586 -297 7 1119 8442 37 0 0 chrX 70045666 70046662 -96603634 + L1Md_T LINE L1 5587 6582 0 7 1119 7225 62 5 29 chrX 70046662 70047967 -96602329 + L1_Mus2 LINE L1 5290 6565 -1 7 1119 247 171 0 0 chrX 70047976 70048017 -96602279 + MTD LTR MaLR 345 385 -34 7 1119 281 0 77 0 chrX 70048031 70048070 -96602226 + (TTTTG)n Simple_repeat Simple_repeat 3 44 0 7 1119 1121 52 0 0 chrX 70048075 70048209 -96602087 - B1_Mus1 SINE Alu -14 134 1 7 1119 277 93 47 0 chrX 70048209 70048252 -96602044 + MTD LTR MaLR 375 419 0 7 1119 456 19 0 0 chrX 70048259 70048312 -96601984 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 8 1119 300 324 101 7 chrX 70048610 70048759 -96601537 + L1M5 LINE L1 2529 2691 -3455 8 1119 1642 209 60 9 chrX 70048960 70049307 -96600989 - MTD LTR MaLR -3 416 52 8 1119 325 218 26 60 chrX 70049307 70049424 -96600872 - Lx6 LINE L1 -37 7423 7311 8 1119 238 159 0 0 chrX 70049430 70049474 -96600822 - MTD LTR MaLR -363 56 13 8 1119 486 0 0 0 chrX 70049660 70049714 -96600582 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 8 1119 251 308 0 49 chrX 70049808 70049890 -96600406 + ID4_ SINE ID 6 83 0 8 1119 256 229 0 40 chrX 70049921 70049971 -96600325 + PB1D9 SINE Alu 66 113 -7 8 1119 25 0 0 0 chrX 70050274 70050299 -96599997 + AT_rich Low_complexity Low_complexity 1 25 0 8 1119 482 262 35 7 chrX 70050453 70050595 -96599701 + Lx8 LINE L1 6919 7064 -409 8 1119 195 139 0 0 chrX 70050599 70050635 -96599661 + (TGG)n Simple_repeat Simple_repeat 2 37 0 8 1119 714 267 34 0 chrX 70051141 70051317 -96598979 + B3A SINE B2 1 182 -16 9 1119 185 274 48 16 chrX 70051976 70052039 -96598257 - L2a LINE L2 -73 3353 3289 9 1119 492 18 0 0 chrX 70052377 70052434 -96597862 + (CA)n Simple_repeat Simple_repeat 2 58 0 9 1119 295 238 96 29 chrX 70053183 70053287 -96597009 - MTEa LTR MaLR 0 379 269 9 1119 1242 169 204 19 chrX 70053375 70053738 -96596558 + LTRIS5 LTR ERV1 3 432 -15 9 1119 506 333 27 88 chrX 70053715 70053978 -96596318 - MTEa LTR MaLR -127 252 6 9 1119 255 310 8 62 chrX 70053983 70054174 -96596122 + L1MB7 LINE L1 5464 5631 -549 9 1119 9366 56 15 14 chrX 70054201 70055516 -96594780 - Lx3_Mus LINE L1 0 7009 5694 9 1119 262 250 54 48 chrX 70055563 70055710 -96594586 - L1M4 LINE L1 -367 5807 5660 9 1119 312 288 58 17 chrX 70055675 70055848 -96594448 + L1MB7 LINE L1 6002 6181 -3 9 1119 261 148 33 100 chrX 70055956 70056016 -96594280 + Lx8 LINE L1 6877 6932 -541 9 1119 3031 297 33 48 chrX 70056775 70057850 -96592446 + Lx8 LINE L1 6400 7457 -16 9 1119 222 37 0 0 chrX 70058042 70058069 -96592227 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1119 1875 262 60 9 chrX 70058186 70058651 -96591645 - Lx6 LINE L1 -26 7434 6946 1 1119 485 209 13 13 chrX 70058895 70059045 -96591251 + (TA)n Simple_repeat Simple_repeat 2 151 0 1 1119 5814 140 5 15 chrX 70060483 70061401 -96588895 + Lx2 LINE L1 6089 6997 0 1 1119 236 262 67 67 chrX 70061747 70061837 -96588459 + Lx5 LINE L1 6754 6843 -207 1 1119 441 0 0 0 chrX 70061906 70061955 -96588341 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1119 309 215 48 48 chrX 70062064 70062147 -96588149 + B3 SINE B2 1 83 -133 1 1119 305 124 68 0 chrX 70062509 70062582 -96587714 + L1MA5A LINE L1 6042 6124 -176 1 1119 8227 32 0 0 chrX 70062578 70064044 -96586252 - L1Md_T LINE L1 -1 6581 5116 1 1119 271 252 60 10 chrX 70064051 70064151 -96586145 + L1MA5A LINE L1 6115 6219 -81 1 1119 1603 190 91 173 chrX 70064178 70064859 -96585437 + Lx7 LINE L1 7071 7695 -1 1 1119 182 264 38 0 chrX 70065211 70065264 -96585032 - MIR SINE MIR -95 167 113 1 1119 526 218 40 0 chrX 70065349 70065473 -96584823 - URR1A DNA MER1_type -17 209 81 1 1119 1031 115 0 12 chrX 70065835 70066002 -96584294 + (GAAA)n Simple_repeat Simple_repeat 4 168 0 1 1119 420 228 26 150 chrX 70066688 70066916 -96583380 - RMER4B LTR ERVK -6 579 343 1 1119 1140 183 56 12 chrX 70067264 70067513 -96582783 - RMER4B LTR ERVK -309 276 17 1 1119 207 0 0 0 chrX 70067625 70067648 -96582648 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1119 264 59 0 0 chrX 70067648 70067681 -96582615 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 1119 234 0 0 0 chrX 70067918 70067944 -96582352 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1119 692 140 9 0 chrX 70068043 70068150 -96582146 - B3A SINE B2 -89 109 2 1 1119 528 316 40 0 chrX 70068332 70068484 -96581812 - RSINE1 SINE B4 -2 163 6 1 1119 225 354 71 0 chrX 70074420 70074519 -96575777 - MER91A DNA Tip100 -51 145 40 1 1119 441 54 0 0 chrX 70075330 70075386 -96574910 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1119 211 358 6 23 chrX 70075637 70075814 -96574482 + (CATATA)n Simple_repeat Simple_repeat 5 178 0 1 1119 302 278 64 0 chrX 70076823 70076958 -96573338 - MIRc SINE MIR -108 160 11 1 1119 4027 78 4 2 chrX 70077833 70078350 -96571946 - L1_Mus1 LINE L1 -1 6566 6049 1 1119 28 29 0 0 chrX 70079083 70079118 -96571178 + AT_rich Low_complexity Low_complexity 1 35 0 1 1119 225 0 0 0 chrX 70083924 70083949 -96566347 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 1119 238 333 36 14 chrX 70084822 70084962 -96565334 - MIRc SINE MIR -4 264 122 1 1119 180 125 0 0 chrX 70086037 70086069 -96564227 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1119 354 61 45 0 chrX 70086496 70086562 -96563734 + (TTG)n Simple_repeat Simple_repeat 2 70 0 1 1119 922 285 50 29 chrX 70088583 70088755 -96561541 - B4A SINE B4 -8 284 117 1 1119 1968 188 30 8 chrX 70088755 70089125 -96561171 - ORR1C1 LTR MaLR 0 378 1 1 1119 922 285 50 29 chrX 70089125 70089230 -96561066 - B4A SINE B4 -176 116 1 1 1119 676 278 25 0 chrX 70089627 70089789 -96560507 - B4A SINE B4 -75 217 52 1 1119 1049 244 174 90 chrX 70089823 70090323 -96559973 - RMER15 LTR ERVL -33 542 1 1 1119 480 18 0 0 chrX 70090389 70090446 -96559850 + (TTA)n Simple_repeat Simple_repeat 3 59 0 1 1119 3661 50 4 17 chrX 70090449 70090914 -96559382 - L1_Mus1 LINE L1 -15 6552 6094 1 1119 523 278 34 56 chrX 70091578 70091757 -96558539 - MLT2B3 LTR ERVL -255 299 125 1 1119 866 258 10 15 chrX 70091862 70092067 -96558229 - MTE2b LTR MaLR -14 365 162 1 1119 23 33 0 0 chrX 70092194 70092224 -96558072 + AT_rich Low_complexity Low_complexity 1 30 0 1 1119 990 122 13 13 chrX 70092224 70092374 -96557922 + B1_Mur4 SINE Alu 1 150 0 1 1119 542 212 176 16 chrX 70092412 70092594 -96557702 + B3 SINE B2 5 215 -1 1 1119 1232 230 89 21 chrX 70092756 70093093 -96557203 - RMER19C LTR ERVK -251 360 1 1 1119 1287 217 100 6 chrX 70093093 70093413 -96556883 + Lx6 LINE L1 6177 6526 -934 1 1119 1421 145 41 4 chrX 70093413 70093655 -96556641 + RLTR20B2 LTR ERVK 1 251 -309 1 1119 617 104 304 0 chrX 70093655 70093726 -96556570 + RLTR20B2 LTR ERVK 385 465 -95 1 1119 405 0 0 0 chrX 70093726 70093771 -96556525 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1119 617 104 304 0 chrX 70093771 70093834 -96556462 + RLTR20B2 LTR ERVK 466 559 -1 1 1119 1975 162 30 15 chrX 70093834 70094173 -96556123 + Lx7 LINE L1 6532 6875 -821 1 1119 1564 166 17 83 chrX 70094237 70094599 -96555697 + Lx7 LINE L1 7359 7696 0 1 1119 225 170 287 78 chrX 70094661 70094776 -96555520 + B3 SINE B2 1 139 -77 1 1119 259 238 28 56 chrX 70094772 70094858 -96555438 - RMER4B LTR ERVK -14 571 489 1 1119 7755 103 32 39 chrX 70094858 70096075 -96554221 + Lx2A LINE L1 5800 7007 -1 1 1119 851 237 157 64 chrX 70096075 70096438 -96553858 - RMER4B LTR ERVK -97 488 57 1 1119 759 186 0 20 chrX 70096564 70096712 -96553584 - RMER1C Other Other 0 1342 1198 1 1119 393 75 0 0 chrX 70096712 70096765 -96553531 + (GA)n Simple_repeat Simple_repeat 1 53 0 1 1119 222 37 0 0 chrX 70096759 70096786 -96553510 + (GGAA)n Simple_repeat Simple_repeat 4 30 0 1 1119 2285 177 22 5 chrX 70096786 70096813 -96553483 - RMER1C Other Other -119 1223 1197 1 1119 850 43 17 0 chrX 70096813 70096928 -96553368 + (GAA)n Simple_repeat Simple_repeat 1 117 0 1 1119 2285 177 22 5 chrX 70096928 70097304 -96552992 - RMER1C Other Other -146 1196 813 1 1119 2662 221 53 48 chrX 70097629 70098252 -96552044 + RMER1C Other Other 717 1342 0 1 1119 1292 201 147 13 chrX 70098284 70098591 -96551705 + Lx7 LINE L1 6703 7050 -646 1 1119 492 208 55 16 chrX 70098731 70098858 -96551438 + Lx7 LINE L1 7561 7692 -4 1 1119 1310 132 9 18 chrX 70098994 70099218 -96551078 - Lx2 LINE L1 0 6997 6776 1 1119 23 33 0 0 chrX 70099234 70099264 -96551032 + AT_rich Low_complexity Low_complexity 1 30 0 1 1119 10703 82 8 13 chrX 70099365 70100882 -96549414 - MusHAL1 LINE L1 -666 2046 538 1 1119 3686 163 67 60 chrX 70100882 70101751 -96548545 - RMER19B LTR ERVK -27 875 1 1 1119 1596 266 30 30 chrX 70101895 70102321 -96547975 + Lx9 LINE L1 6559 6984 -660 1 1119 1891 173 93 0 chrX 70102321 70102697 -96547599 - MTD LTR MaLR -8 411 1 1 1119 1341 282 36 38 chrX 70102697 70103198 -96547098 + Lx9 LINE L1 6976 7475 -169 1 1119 363 23 0 0 chrX 70103199 70103243 -96547053 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1119 244 246 0 0 chrX 70103253 70103318 -96546978 + Lx9 LINE L1 7532 7596 -48 1 1119 592 257 22 0 chrX 70103737 70103873 -96546423 + Lx6 LINE L1 7302 7440 -20 1 1119 8307 58 1 1 chrX 70104278 70105305 -96544991 + L1Md_F2 LINE L1 4559 5585 -298 1 1119 8072 51 2 4 chrX 70105306 70106292 -96544004 + L1Md_F2 LINE L1 5587 6570 -12 1 1119 224 149 21 0 chrX 70106380 70106427 -96543869 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1119 301 312 54 0 chrX 70106529 70106622 -96543674 - PB1D7 SINE Alu -6 114 17 1 1119 324 0 0 0 chrX 70107021 70107057 -96543239 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1119 342 243 178 0 chrX 70107139 70107246 -96543050 - B3A SINE B2 -56 142 17 1 1119 325 82 0 0 chrX 70107242 70107291 -96543005 + B1_Mus2 SINE Alu 93 141 -6 1 1119 405 0 0 0 chrX 70107294 70107339 -96542957 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1119 298 292 0 0 chrX 70108178 70108267 -96542029 + PB1D10 SINE Alu 27 115 -2 1 1119 418 273 82 22 chrX 70108376 70108511 -96541785 - B1F2 SINE Alu -1 148 6 1 1119 209 193 17 34 chrX 70108687 70108746 -96541550 + T-rich Low_complexity Low_complexity 1 58 0 1 1119 355 265 76 17 chrX 70108852 70108971 -96541325 - B1F SINE Alu 0 149 24 1 1119 2921 49 54 0 chrX 70109181 70109549 -96540747 + RLTR10 LTR ERVK 1 388 -2 1 1119 10828 112 52 48 chrX 70109560 70111500 -96538796 + RLTR10-int LTR ERVK 40 1986 -1 1 1119 3186 42 5 5 chrX 70111501 70111888 -96538408 + RLTR10 LTR ERVK 2 388 -2 1 1119 326 283 73 42 chrX 70116550 70116742 -96533554 - B3A SINE B2 0 198 1 1 1119 722 188 70 183 chrX 70116952 70117193 -96533103 + B3 SINE B2 2 215 -1 1 1119 814 271 79 11 chrX 70117397 70117662 -96532634 - MTE2b LTR MaLR -39 340 58 1 1119 698 259 224 21 chrX 70117747 70118220 -96532076 + Lx7 LINE L1 7118 7686 -10 1 1119 291 54 0 0 chrX 70118239 70118276 -96532020 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 1 1119 587 135 0 0 chrX 70118284 70118380 -96531916 + MTC LTR MaLR 1 96 -325 1 1119 7152 51 0 1 chrX 70118380 70119241 -96531055 + L1_Mus1 LINE L1 5708 6567 0 1 1119 1065 67 7 0 chrX 70119251 70119386 -96530910 + B1_Mus1 SINE Alu 1 136 -12 1 1119 450 36 0 0 chrX 70119386 70119442 -96530854 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 1119 449 0 0 0 chrX 70119467 70119525 -96530771 + RLTR10 LTR ERVK 1 58 -332 1 1119 3039 15 0 0 chrX 70119525 70119862 -96530434 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 1119 10046 25 2 4 chrX 70119862 70121002 -96529294 - IAPEz-int LTR ERVK 0 6481 5345 1 139 26232 25 40 9 chrX 70120991 70124055 -96526241 - IAPEz-int LTR ERVK -3316 3165 8 1 1120 3008 12 3 0 chrX 70124055 70124391 -96525905 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 1120 1545 156 120 3 chrX 70124391 70124674 -96525622 + MTC LTR MaLR 106 421 0 1 1120 321 297 6 69 chrX 70124923 70125082 -96525214 + MLT1B LTR MaLR 1 149 -241 1 1120 3448 143 58 4 chrX 70125120 70125674 -96524622 + RMER4B LTR ERVK 2 585 0 1 1120 2090 180 59 2 chrX 70125684 70126219 -96524077 + MurERV4-int LTR ERVK 38 723 -4537 1 1120 379 123 15 0 chrX 70126214 70126279 -96524017 + MurERV4-int LTR ERVK 891 956 -4304 1 1120 306 305 94 0 chrX 70126510 70126713 -96523583 - L1MD LINE L1 -1542 4604 4383 1 1120 669 261 21 0 chrX 70126726 70126868 -96523428 + RSINE1 SINE B4 3 147 -18 1 1120 360 0 0 0 chrX 70126871 70126911 -96523385 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1120 328 257 141 60 chrX 70126911 70127110 -96523186 - L1MD LINE L1 -1759 4387 4173 1 1120 846 268 127 61 chrX 70127115 70127461 -96522835 + MTE2a LTR MaLR 1 369 -10 1 1120 247 267 26 13 chrX 70127802 70127878 -96522418 + B4A SINE B4 3 79 -213 1 1120 215 217 0 0 chrX 70128370 70128416 -96521880 + GA-rich Low_complexity Low_complexity 1 46 0 1 1120 307 282 162 0 chrX 70129328 70129445 -96520851 + MLT2D LTR ERVL 80 215 -199 1 1120 241 33 0 0 chrX 70129546 70129576 -96520720 + ORR1C1 LTR MaLR 2 31 -353 1 1120 1085 146 37 9 chrX 70129577 70129791 -96520505 + Lx3C LINE L1 6008 6227 -749 1 1120 1870 160 151 15 chrX 70129821 70130233 -96520063 + Lx3C LINE L1 6504 6971 -5 1 1120 1761 177 62 0 chrX 70130243 70130582 -96519714 + ORR1C1 LTR MaLR 19 378 0 1 1120 678 274 55 5 chrX 70130582 70130784 -96519512 - L1MD LINE L1 -793 5566 5355 1 1120 1264 267 87 45 chrX 70130782 70131423 -96518873 - L1MD LINE L1 -1994 4152 3471 1 1120 307 331 118 16 chrX 70131408 70131654 -96518642 - L1MD LINE L1 -3472 2674 2404 1 1120 1091 235 5 0 chrX 70131743 70131956 -96518340 - B3 SINE B2 0 216 3 1 1120 5735 38 0 1 chrX 70132038 70132707 -96517589 - L1Md_F2 LINE L1 -1 6581 5914 1 1120 284 312 0 12 chrX 70132746 70132827 -96517469 - ID4 SINE ID -3 80 1 2 1120 2039 154 45 6 chrX 70132873 70133226 -96517070 - ORR1B2 LTR MaLR 0 367 1 2 1120 286 382 106 26 chrX 70133246 70133472 -96516824 + LTR16A LTR ERVL 168 411 -40 2 1120 2022 141 24 56 chrX 70133633 70133998 -96516298 - ORR1C2 LTR MaLR 0 384 32 2 1120 1403 150 52 63 chrX 70133998 70134346 -96515950 - RMER17A LTR ERVK 0 751 408 2 1120 247 198 88 59 chrX 70134415 70134517 -96515779 + L1MD LINE L1 5714 5818 -2177 2 1120 338 337 84 22 chrX 70134572 70134751 -96515545 + L1ME2 LINE L1 5914 6103 -61 2 1120 569 234 0 9 chrX 70134770 70134882 -96515414 + ID_B1 SINE B4 109 219 -5 2 1120 240 257 26 26 chrX 70134969 70135045 -96515251 + ID4_ SINE ID 3 78 -5 2 1120 269 270 33 33 chrX 70135324 70135416 -96514880 + RSINE1 SINE B4 13 104 -61 2 1120 232 250 139 0 chrX 70135442 70135514 -96514782 - RMER15 LTR ERVL -68 507 426 2 1120 2896 223 14 50 chrX 70136523 70137183 -96513113 - Lx7 LINE L1 -449 7247 6612 2 1120 536 218 82 32 chrX 70137299 70137510 -96512786 - L1MB7 LINE L1 -262 5902 5683 2 1120 1812 219 51 22 chrX 70137552 70138005 -96512291 + RMER19C LTR ERVK 146 611 0 2 1120 713 284 10 0 chrX 70138025 70138219 -96512077 - L1MB7 LINE L1 -500 5668 5473 2 1120 7730 36 0 3 chrX 70138209 70139115 -96511181 - L1Md_F2 LINE L1 -2 6580 5678 2 1120 295 116 0 0 chrX 70139105 70139148 -96511148 + L1_Mm LINE L1 4365 4407 -1476 2 1120 236 198 231 94 chrX 70139148 70139265 -96511031 - L1MB7 LINE L1 -683 5491 5359 2 1120 656 198 0 31 chrX 70139325 70139455 -96510841 - RSINE1 SINE B4 -38 127 2 2 1120 540 272 12 25 chrX 70139560 70139722 -96510574 - L1MA4 LINE L1 -354 5946 5787 2 1120 591 234 145 6 chrX 70139763 70139935 -96510361 - B3 SINE B2 0 216 21 2 1120 691 328 20 18 chrX 70139982 70140376 -96509920 - L1MB7 LINE L1 -849 5291 4897 2 1120 510 273 143 8 chrX 70140448 70140692 -96509604 + Charlie4a DNA MER1_type 28 304 -204 2 1120 880 267 71 39 chrX 70141753 70142034 -96508262 - B4A SINE B4 -2 290 1 2 1120 560 292 48 5 chrX 70142683 70142869 -96507427 + MLT1B LTR MaLR 4 197 -193 2 1120 237 289 18 0 chrX 70142870 70142984 -96507312 + (TAGA)n Simple_repeat Simple_repeat 3 118 0 2 1120 450 309 0 99 chrX 70142985 70143197 -96507099 + MLT1B LTR MaLR 173 363 -27 2 1120 372 232 0 0 chrX 70143879 70143978 -96506318 + (TA)n Simple_repeat Simple_repeat 2 100 0 2 1120 474 359 86 47 chrX 70144241 70144650 -96505646 + MLT1J2 LTR MaLR 24 448 0 2 1120 213 343 111 28 chrX 70145212 70145320 -96504976 - MIRm SINE MIR -4 272 156 2 1120 717 259 68 18 chrX 70145504 70145783 -96504513 - L1MB4 LINE L1 -30 6150 5858 2 1120 607 260 68 0 chrX 70146081 70146258 -96504038 - L1MB4 LINE L1 -350 5821 5633 2 1120 1314 93 16 0 chrX 70146325 70146507 -96503789 - B2_Mm1a SINE B2 -7 186 2 2 1120 633 246 15 125 chrX 70146540 70146740 -96503556 + B3A SINE B2 1 178 -20 2 1120 1832 275 18 18 chrX 70147486 70147982 -96502314 + Lx7 LINE L1 6738 7233 -463 2 1120 223 226 47 12 chrX 70148121 70148206 -96502090 + (TA)n Simple_repeat Simple_repeat 2 89 0 2 1120 340 276 97 0 chrX 70148212 70148343 -96501953 - MLT2B4 LTR ERVL -90 466 275 2 1120 334 221 0 0 chrX 70148379 70148447 -96501849 + B4A SINE B4 1 68 -224 2 1120 551 224 79 8 chrX 70148447 70148573 -96501723 + B1_Mur2 SINE Alu 3 137 -12 2 1120 333 0 0 0 chrX 70148575 70148612 -96501684 + (TAAAA)n Simple_repeat Simple_repeat 1 37 0 2 1120 226 364 37 15 chrX 70148638 70148772 -96501524 + B4A SINE B4 146 282 -10 2 1120 325 355 103 29 chrX 70149087 70149261 -96501035 + L2a LINE L2 2956 3142 -284 2 1120 237 65 0 0 chrX 70149289 70149320 -96500976 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1120 2338 74 58 0 chrX 70149386 70149695 -96500601 + ORR1A2 LTR MaLR 1 327 0 2 1120 222 208 0 0 chrX 70149700 70149753 -96500543 + (TATG)n Simple_repeat Simple_repeat 1 53 0 2 1120 192 229 0 0 chrX 70149939 70149987 -96500309 + L3 LINE CR1 2650 2697 -1792 2 1120 1154 57 0 0 chrX 70150002 70150143 -96500153 + B1_Mus1 SINE Alu 1 141 -7 2 1120 476 148 18 18 chrX 70150155 70150265 -96500031 + GA-rich Low_complexity Low_complexity 2 111 0 2 1120 615 139 0 0 chrX 70150242 70150343 -96499953 + (GAAA)n Simple_repeat Simple_repeat 4 104 0 2 1120 188 227 0 29 chrX 70150591 70150659 -96499637 + (CATA)n Simple_repeat Simple_repeat 3 68 0 2 1120 2465 117 41 10 chrX 70150890 70151280 -96499016 - MTC LTR MaLR -8 413 12 2 1120 3184 177 44 7 chrX 70151282 70151874 -96498422 + Lx5 LINE L1 6437 7050 0 2 1120 382 287 24 30 chrX 70151998 70152167 -96498129 - MIR SINE MIR -9 253 86 2 1120 479 233 8 8 chrX 70152289 70152406 -96497890 - ID_B1 SINE B4 -4 220 104 2 1120 366 256 89 15 chrX 70152406 70152423 -96497873 - B1F SINE Alu -4 144 1 2 1120 432 0 0 0 chrX 70152536 70152584 -96497712 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1120 240 295 43 92 chrX 70152597 70152761 -96497535 - MLT1C LTR MaLR -23 444 289 2 1120 333 355 37 28 chrX 70152796 70153013 -96497283 - RMER15 LTR ERVL -5 570 352 2 1120 285 307 165 24 chrX 70153275 70153445 -96496851 - MLT1C LTR MaLR -273 194 1 2 1120 210 143 0 0 chrX 70154141 70154190 -96496106 + (T)n Simple_repeat Simple_repeat 1 49 0 2 1120 1163 56 7 0 chrX 70154192 70154336 -96495960 - B1_Mm SINE Alu -2 145 1 2 1120 504 244 62 16 chrX 70154769 70154898 -96495398 + RSINE1 SINE B4 2 136 -29 2 1120 458 242 113 0 chrX 70154928 70155052 -96495244 + B3 SINE B2 79 216 0 2 1120 455 312 0 178 chrX 70155258 70155488 -96494808 + B3A SINE B2 9 197 -1 2 1120 243 0 0 0 chrX 70156853 70156880 -96493416 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1120 459 0 0 0 chrX 70156880 70156930 -96493366 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 1120 293 263 20 20 chrX 70157336 70157437 -96492859 + L1MA8 LINE L1 6190 6290 -1 2 1120 228 200 0 0 chrX 70157985 70158050 -96492246 + GA-rich Low_complexity Low_complexity 2 66 0 2 1120 860 249 0 67 chrX 70158088 70158312 -96491984 + B3 SINE B2 6 214 -2 2 1120 445 246 79 7 chrX 70158394 70158533 -96491763 - B1F SINE Alu 0 149 1 2 1120 1053 105 0 0 chrX 70159703 70159846 -96490450 + B1_Mus1 SINE Alu 1 143 -5 2 1120 186 43 0 0 chrX 70160904 70160927 -96489369 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1120 32 0 0 0 chrX 70161315 70161347 -96488949 + AT_rich Low_complexity Low_complexity 1 32 0 2 1120 316 214 0 0 chrX 70162426 70162482 -96487814 + RSINE1 SINE B4 75 130 -35 2 1120 807 191 0 7 chrX 70165080 70165228 -96485068 - B1_Mur1 SINE Alu 0 149 3 2 1120 248 293 103 32 chrX 70165268 70165423 -96484873 + L2a LINE L2 3186 3351 -75 2 1120 1967 276 95 25 chrX 70167041 70167809 -96482487 - L1MB3 LINE L1 -10 6173 5352 2 1120 1243 250 19 54 chrX 70168461 70168778 -96481518 + Lx5 LINE L1 6745 7050 0 2 1120 215 283 149 29 chrX 70168954 70169137 -96481159 - MIRb SINE MIR -6 262 48 2 1120 205 364 0 0 chrX 70169692 70169758 -96480538 - L2b LINE L2 -25 3350 3285 2 1120 953 202 23 23 chrX 70170018 70170236 -96480060 - MTEb LTR MaLR 0 379 162 2 1120 742 180 189 44 chrX 70170254 70170434 -96479862 - B3 SINE B2 -5 211 6 2 1120 601 245 84 26 chrX 70170434 70170589 -96479707 - MTEb LTR MaLR -197 182 19 2 1120 1983 33 0 55 chrX 70171263 70171553 -96478743 - RLTRETN_Mm LTR ERVK -46 276 3 2 1120 644 253 5 42 chrX 70171822 70172012 -96478284 - Lx6 LINE L1 -26 7434 7252 2 1120 426 254 86 16 chrX 70172197 70172325 -96477971 + B3 SINE B2 13 149 -67 2 1120 475 178 0 0 chrX 70172482 70172572 -96477724 - 4.5SRNA scRNA scRNA -4 90 1 2 1120 248 297 122 0 chrX 70173225 70173299 -96476997 - ID4 SINE ID 0 83 1 2 1120 371 179 0 0 chrX 70173612 70173679 -96476617 + B1_Mur2 SINE Alu 63 129 -20 2 1120 219 36 0 0 chrX 70173691 70173719 -96476577 + (CATA)n Simple_repeat Simple_repeat 1 28 0 2 1120 219 227 0 0 chrX 70173802 70173846 -96476450 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1120 1361 244 45 25 chrX 70173969 70174323 -96475973 - ORR1D2 LTR MaLR -8 362 2 2 1120 703 297 15 5 chrX 70174332 70174528 -96475768 - B4A SINE B4 -94 198 1 2 1120 22 0 0 0 chrX 70174535 70174557 -96475739 + AT_rich Low_complexity Low_complexity 1 22 0 2 1120 1168 51 0 0 chrX 70175236 70175374 -96474922 + B1_Mus2 SINE Alu 1 138 -9 2 1120 252 326 0 39 chrX 70175437 70175539 -96474757 - MER58B DNA MER1_type -67 274 177 2 1120 585 240 34 107 chrX 70175685 70175890 -96474406 - B3A SINE B2 -7 191 2 2 1120 226 292 135 27 chrX 70176457 70176605 -96473691 - MLT2C1 LTR ERVL -53 344 181 2 1120 271 105 45 0 chrX 70177100 70177151 -96473145 - PB1 SINE Alu -61 66 21 2 1120 801 268 54 0 chrX 70177298 70177503 -96472793 - B3 SINE B2 0 216 1 2 1120 41184 3 13 0 chrX 70177521 70183777 -96466519 - L1Md_A LINE L1 0 6582 241 2 1120 643 228 138 0 chrX 70184090 70184257 -96466039 - B4A SINE B4 -18 274 85 2 1120 1098 88 0 7 chrX 70184293 70184441 -96465855 - B1_Mus1 SINE Alu 0 148 2 2 1120 191 61 30 0 chrX 70184448 70184481 -96465815 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2 1120 326 247 58 39 chrX 70184533 70184689 -96465607 - L1MC5 LINE L1 -163 7798 7640 2 1120 297 0 0 0 chrX 70185088 70185121 -96465175 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1120 448 263 22 25 chrX 70185122 70185256 -96465040 - B1F SINE Alu 0 149 18 2 1120 468 0 0 0 chrX 70185359 70185411 -96464885 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 1120 549 291 126 0 chrX 70185705 70185880 -96464416 + MER21B LTR ERV1 361 557 -306 3 1120 276 259 229 50 chrX 70186115 70186294 -96464002 + L1MC4 LINE L1 7334 7544 -498 3 1120 419 322 0 41 chrX 70186499 70186622 -96463674 + B4A SINE B4 56 173 -119 3 1120 464 257 0 0 chrX 70186653 70186762 -96463534 + B1_Mur1 SINE Alu 41 149 0 3 1120 222 118 0 0 chrX 70186769 70186803 -96463493 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 3 1120 286 285 141 65 chrX 70186873 70187057 -96463239 - L1MC5 LINE L1 -1048 6913 6716 2 1120 2248 87 60 17 chrX 70187291 70187643 -96462653 + IAPLTR1_Mm LTR ERVK 1 367 0 3 1120 56429 27 8 5 chrX 70187643 70194091 -96456205 + IAPEz-int LTR ERVK 8 6479 -2 3 1120 2248 87 60 17 chrX 70194093 70194445 -96455851 + IAPLTR1_Mm LTR ERVK 1 367 0 3 1120 865 284 169 16 chrX 70194983 70195467 -96454829 - L1MB3 LINE L1 -53 6130 5573 3 1120 616 301 72 10 chrX 70195823 70196018 -96454278 - MTEa LTR MaLR -139 240 34 3 1120 278 328 33 0 chrX 70196146 70196268 -96454028 - L1ME3B LINE L1 -295 5945 5820 3 1120 191 114 0 28 chrX 70196791 70196827 -96453469 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 3 1120 902 164 7 0 chrX 70196831 70196977 -96453319 - B1_Mus1 SINE Alu 0 148 2 3 1120 460 289 45 19 chrX 70197200 70197355 -96452941 - B3A SINE B2 -1 197 39 3 1120 1066 168 37 0 chrX 70197342 70197533 -96452763 + URR1A DNA MER1_type 29 226 0 3 1120 232 194 0 114 chrX 70197668 70197738 -96452558 - BC1_Mm scRNA scRNA -54 98 37 3 1120 423 331 120 6 chrX 70199584 70199751 -96450545 - B4 SINE B4 -7 285 100 3 1120 758 268 25 25 chrX 70199750 70199949 -96450347 - B4 SINE B4 -92 200 2 3 1120 772 268 138 25 chrX 70200624 70200949 -96449347 - MLT1A0 LTR MaLR 0 365 4 3 1120 262 280 84 0 chrX 70200988 70201095 -96449201 - MLT1C LTR MaLR -28 439 324 3 1120 663 175 214 13 chrX 70203867 70204033 -96446263 + B3 SINE B2 34 216 0 3 1120 689 147 0 75 chrX 70205467 70205614 -96444682 - L1Md_F3 LINE L1 -12 6572 6437 3 1120 1188 239 3 75 chrX 70206149 70206457 -96443839 + B4A SINE B4 1 286 -6 3 1120 272 312 177 30 chrX 70206599 70206797 -96443499 - MLT1D LTR MaLR -172 333 107 3 1120 416 318 176 8 chrX 70207743 70208101 -96442195 + MLT1C LTR MaLR 46 463 -4 3 1120 767 313 104 9 chrX 70209716 70210051 -96440245 + MER21B LTR ERV1 375 741 -122 3 1120 346 269 9 28 chrX 70210144 70210251 -96440045 + MLT1E3 LTR MaLR 84 188 -436 3 1120 487 269 20 14 chrX 70211417 70211564 -96438732 - B1F SINE Alu 0 149 2 3 1120 776 291 119 19 chrX 70213351 70213670 -96436626 - Lx8 LINE L1 -19 7454 7104 3 1120 351 89 0 0 chrX 70213694 70213750 -96436546 + (TCC)n Simple_repeat Simple_repeat 2 57 0 3 1120 457 231 48 0 chrX 70213856 70213960 -96436336 + Lx8 LINE L1 6985 7093 -380 3 1120 430 176 54 0 chrX 70213987 70214061 -96436235 + Lx8 LINE L1 6468 6545 -928 3 1120 704 300 41 16 chrX 70214113 70214357 -96435939 - B4A SINE B4 -10 282 33 3 1120 2958 252 58 6 chrX 70214359 70215081 -96435215 - Lx8 LINE L1 -426 7047 6288 3 1120 459 294 0 40 chrX 70215097 70215221 -96435075 - ID_B1 SINE B4 -7 217 99 3 1120 967 203 36 90 chrX 70215239 70215461 -96434835 + B3 SINE B2 2 211 -5 3 1120 3776 157 28 45 chrX 70215538 70216059 -96434237 + Lx LINE L1 599 1121 -5536 3 1120 2938 44 41 0 chrX 70216059 70216426 -96433870 + L1_Mus1 LINE L1 6186 6567 0 3 1120 8008 145 274 16 chrX 70216426 70217015 -96433281 + Lx LINE L1 1122 1693 -4190 3 1120 1103 82 0 0 chrX 70217015 70217161 -96433135 + B1_Mus1 SINE Alu 2 147 -1 3 1120 8008 143 321 11 chrX 70217161 70218650 -96431646 + Lx LINE L1 1694 3804 -2079 3 1120 5797 114 11 0 chrX 70218642 70219821 -96430475 + Lx LINE L1 4967 6154 -500 3 1120 1852 93 27 0 chrX 70219821 70220078 -96430218 + Lx LINE L1 6391 6654 0 3 1120 201 180 20 0 chrX 70220078 70220128 -96430168 + A-rich Low_complexity Low_complexity 4 54 0 3 1120 885 138 0 0 chrX 70220234 70220379 -96429917 + (TTC)n Simple_repeat Simple_repeat 2 146 0 3 1120 450 169 263 0 chrX 70220379 70220497 -96429799 - B1_Mur2 SINE Alu 0 149 1 3 1120 585 301 110 69 chrX 70220632 70220950 -96429346 + ORR1E LTR MaLR 1 331 -28 3 1120 417 241 25 67 chrX 70220998 70221118 -96429178 - PB1D10 SINE Alu -1 116 2 3 1120 263 311 75 53 chrX 70221628 70221815 -96428481 - L2 LINE L2 -1268 2151 1961 3 1120 275 291 21 1 chrX 70222444 70222548 -96427748 - L1M2 LINE L1 -1091 5052 4951 3 1120 619 107 36 0 chrX 70222598 70222710 -96427586 + Lx2 LINE L1 6063 6178 -819 3 1120 947 9 9 0 chrX 70222739 70222851 -96427445 + (TTCC)n Simple_repeat Simple_repeat 2 114 0 3 1120 6609 96 21 12 chrX 70223055 70224017 -96426279 + Lx2 LINE L1 6028 6997 0 3 1120 2944 149 28 52 chrX 70224498 70225035 -96425261 + RMER15 LTR ERVL 19 542 -33 3 1120 591 184 0 0 chrX 70225035 70225176 -96425120 + (TG)n Simple_repeat Simple_repeat 2 142 0 3 1120 896 57 186 0 chrX 70225397 70225521 -96424775 - B1_Mus2 SINE Alu 0 147 1 3 1120 403 308 170 5 chrX 70225661 70225873 -96424423 - L2 LINE L2 -1279 2140 1894 3 1120 381 43 0 0 chrX 70225904 70225951 -96424345 + (ATGGTG)n Simple_repeat Simple_repeat 1 47 0 3 1120 416 250 0 0 chrX 70225980 70226056 -96424240 - ID4_ SINE ID -3 80 5 3 1120 362 354 0 99 chrX 70226100 70226241 -96424055 + B4 SINE B4 1 127 -165 3 1120 682 197 35 35 chrX 70226288 70226430 -96423866 - B1_Mur1 SINE Alu -6 143 2 3 1120 250 295 13 0 chrX 70226961 70227039 -96423257 + MER3 DNA MER1_type 94 172 -37 3 1120 398 267 13 0 chrX 70230273 70230348 -96419948 + B1F SINE Alu 19 94 -55 3 1120 663 154 14 20 chrX 70231681 70231827 -96418469 + CT-rich Low_complexity Low_complexity 2 146 0 3 1120 275 108 0 13 chrX 70233225 70233277 -96417019 - MIR SINE MIR -47 161 111 3 1120 244 235 56 42 chrX 70236266 70236337 -96413959 + MIR SINE MIR 84 155 -107 3 1120 342 0 0 0 chrX 70238830 70238868 -96411428 + (TTTTG)n Simple_repeat Simple_repeat 1 38 0 3 1120 953 63 71 0 chrX 70238868 70238994 -96411302 - B1_Mus1 SINE Alu -13 135 1 3 1120 714 259 66 0 chrX 70239118 70239284 -96411012 + ID_B1 SINE B4 17 193 -31 3 1120 417 161 0 0 chrX 70239287 70239374 -96410922 + (TGGA)n Simple_repeat Simple_repeat 4 90 0 3 1120 201 74 0 0 chrX 70239385 70239412 -96410884 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 3 1120 822 276 18 0 chrX 70239584 70239801 -96410495 - ID_B1 SINE B4 -3 221 1 3 1120 438 329 31 25 chrX 70241097 70241256 -96409040 - MIRb SINE MIR -82 186 27 3 1120 569 284 181 33 chrX 70242006 70242188 -96408108 - B4A SINE B4 0 292 84 3 1120 328 225 65 29 chrX 70242206 70242311 -96407985 - MLT1A1 LTR MaLR -237 122 3 3 1120 213 39 0 0 chrX 70244992 70245018 -96405278 + (GGCTG)n Simple_repeat Simple_repeat 2 27 0 3 1120 181 255 21 21 chrX 70245991 70246039 -96404257 + MIRb SINE MIR 63 110 -158 3 1120 667 260 147 73 chrX 70247245 70247531 -96402765 + MLT1B LTR MaLR 76 382 -8 3 1120 24 53 0 0 chrX 70248909 70248947 -96401349 + AT_rich Low_complexity Low_complexity 1 38 0 3 1120 277 340 107 13 chrX 70249741 70249890 -96400406 + MIRb SINE MIR 80 242 -26 3 1120 357 275 83 0 chrX 70251625 70251745 -96398551 - Tigger13a DNA MER2_type -266 505 376 3 1120 285 252 0 0 chrX 70251755 70251858 -96398438 + (TG)n Simple_repeat Simple_repeat 2 104 0 3 1120 535 283 0 17 chrX 70251859 70251974 -96398322 - B4 SINE B4 -2 290 178 3 1120 230 296 240 12 chrX 70252268 70252392 -96397904 - MIRm SINE MIR -84 192 69 3 1120 695 261 19 39 chrX 70252740 70252947 -96397349 - B3 SINE B2 -12 204 2 3 1120 324 283 141 0 chrX 70253119 70253218 -96397078 + MER20 DNA MER1_type 41 153 -66 3 1120 180 152 0 0 chrX 70253457 70253490 -96396806 + G-rich Low_complexity Low_complexity 1 33 0 3 1120 217 327 29 38 chrX 70253974 70254079 -96396217 + MIR SINE MIR 118 221 -41 3 1120 269 26 0 26 chrX 70254119 70254158 -96396138 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 3 17 3997 51 14 2 chrX 70254158 70254644 -96395652 - Lx3_Mus LINE L1 -19 6990 6499 3 1121 185 339 32 16 chrX 70255102 70255165 -96395131 + L4 LINE RTE 917 980 -1049 3 1121 351 0 0 0 chrX 70256024 70256063 -96394233 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1121 2508 69 3 0 chrX 70256545 70256863 -96393433 - ORR1A2 LTR MaLR -8 319 1 3 1121 180 343 126 50 chrX 70257164 70257465 -96392831 - L2 LINE L2 -829 2590 2267 3 1121 22 0 0 0 chrX 70258653 70258675 -96391621 + AT_rich Low_complexity Low_complexity 1 22 0 3 1121 2792 262 94 94 chrX 70258715 70259445 -96390851 - RMER19B LTR ERVK 0 902 116 3 1121 234 0 0 0 chrX 70259445 70259471 -96390825 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 3 1121 2792 262 94 94 chrX 70259471 70259642 -96390654 - RMER19B LTR ERVK -787 115 1 3 1121 364 264 35 26 chrX 70260108 70260221 -96390075 - HAL1-3A_ME LINE L1 -770 2088 1975 3 1121 282 243 51 51 chrX 70260238 70260316 -96389980 - B4A SINE B4 -2 290 213 3 1121 763 291 62 29 chrX 70260363 70260607 -96389689 - B4A SINE B4 -1 291 40 3 1121 337 109 55 0 chrX 70262419 70262474 -96387822 - MTC LTR MaLR -363 58 1 3 1121 1693 233 46 87 chrX 70262520 70263024 -96387272 - MTC-int LTR MaLR -625 633 151 3 1121 1503 212 23 13 chrX 70263024 70263334 -96386962 - MTC LTR MaLR -108 313 1 3 1121 962 158 14 0 chrX 70264713 70264859 -96385437 + B1_Mur1 SINE Alu 2 149 0 3 1121 2071 127 84 6 chrX 70265324 70265657 -96384639 - ORR1B2 LTR MaLR -8 359 1 3 1121 366 261 14 63 chrX 70266539 70266682 -96383614 - RMER15 LTR ERVL -13 562 427 3 1121 1001 305 108 102 chrX 70266696 70267433 -96382863 - Lx8 LINE L1 -224 7249 6508 3 1121 1838 186 38 13 chrX 70267446 70267832 -96382464 - Lx5 LINE L1 -789 6261 5862 4 1121 737 274 97 109 chrX 70269028 70269263 -96381033 - RMER10A LTR ERVL -25 417 197 4 1121 1211 36 0 0 chrX 70269263 70269401 -96380895 + B1_Mus2 SINE Alu 1 138 -9 4 1121 737 274 97 109 chrX 70269401 70269587 -96380709 - RMER10A LTR ERVL -246 196 1 4 1121 22 0 0 0 chrX 70269938 70269960 -96380336 + AT_rich Low_complexity Low_complexity 1 22 0 4 1121 541 274 90 67 chrX 70270359 70270582 -96379714 - RMER5 LTR ERV1 -306 228 1 4 1121 187 326 20 40 chrX 70270671 70270770 -96379526 - L2 LINE L2 -841 2578 2482 4 1121 1277 171 88 39 chrX 70270775 70271060 -96379236 - ORR1B1 LTR MaLR -55 339 41 4 1121 228 283 139 20 chrX 70271206 70271307 -96378989 - RMER4B LTR ERVK -101 484 372 4 1121 883 265 102 84 chrX 70271308 70271505 -96378791 - RMER17C-int LTR ERVK -260 2978 2871 4 1121 234 91 0 0 chrX 70271505 70271538 -96378758 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 1121 883 233 111 96 chrX 70271538 70271881 -96378415 - RMER17C-int LTR ERVK -368 2870 2608 4 1121 826 104 0 0 chrX 70271947 70272053 -96378243 + LSU-rRNA_Hsa rRNA rRNA 4199 4304 -731 4 1121 609 168 53 159 chrX 70272054 70272337 -96377959 - RMER17C-int LTR ERVK -2415 3722 3470 4 1121 744 267 13 89 chrX 70272764 70273080 -96377216 - MYSERV6-int LTR ERVK -276 8683 8392 4 1121 186 312 79 47 chrX 70273637 70273792 -96376504 - MIR3 SINE MIR -34 174 7 4 1121 351 0 0 0 chrX 70273804 70273843 -96376453 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1121 230 269 48 97 chrX 70273876 70273979 -96376317 - B1F2 SINE Alu -51 98 1 4 1121 376 269 54 0 chrX 70273910 70274003 -96376293 - B4 SINE B4 -135 157 60 4 1121 229 217 130 0 chrX 70276958 70277004 -96373292 + ID_B1 SINE B4 78 129 -95 4 1121 4934 181 16 25 chrX 70277129 70278037 -96372259 - RMER13B LTR ERVK -8 900 1 4 1121 209 190 0 23 chrX 70279991 70280034 -96370262 + G-rich Low_complexity Low_complexity 1 42 0 4 1121 1066 388 34 19 chrX 70281596 70282419 -96367877 - MamGyp-int LTR Gypsy -4128 934 100 4 1121 382 73 0 0 chrX 70283609 70283664 -96366632 - L1_Mus2 LINE L1 0 6566 6512 4 1121 883 103 68 62 chrX 70283671 70283995 -96366301 + L1Md_F2 LINE L1 6424 6582 0 4 1121 975 71 7 0 chrX 70284019 70284159 -96366137 + B1_Mus2 SINE Alu 7 147 0 4 1121 270 0 0 0 chrX 70285602 70285632 -96364664 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1121 336 102 0 0 chrX 70285789 70285838 -96364458 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 4 1121 476 164 22 7 chrX 70285881 70286016 -96364280 + CT-rich Low_complexity Low_complexity 1 137 0 4 1121 223 192 19 0 chrX 70286237 70286289 -96364007 + T-rich Low_complexity Low_complexity 2 54 0 4 1121 348 269 0 154 chrX 70286307 70286443 -96363853 + ID_B1 SINE B4 102 216 -8 4 1121 315 234 49 61 chrX 70286374 70286456 -96363840 + B1F SINE Alu 69 149 0 4 1121 1206 29 0 0 chrX 70286527 70286664 -96363632 + B1_Mm SINE Alu 1 137 -10 4 1121 339 320 67 67 chrX 70286711 70286919 -96363377 + MER92B LTR ERV1 139 346 -290 4 1121 758 68 93 0 chrX 70287187 70287305 -96362991 + B1_Mus2 SINE Alu 19 147 0 4 1121 349 230 70 23 chrX 70287582 70287696 -96362600 - B4A SINE B4 -8 284 164 4 1121 396 0 0 0 chrX 70287963 70288007 -96362289 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1121 441 36 0 0 chrX 70288007 70288061 -96362235 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 1121 1488 159 166 0 chrX 70288637 70288951 -96361345 - ORR1D1 LTR MaLR -8 366 1 4 1121 409 214 34 8 chrX 70289174 70289292 -96361004 - L1M3 LINE L1 -815 5325 5205 4 1121 751 269 32 0 chrX 70289495 70289681 -96360615 - B3A SINE B2 -2 196 5 4 1121 294 106 0 0 chrX 70289805 70289852 -96360444 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 1121 539 350 4 39 chrX 70289862 70290094 -96360202 + B4 SINE B4 2 225 -67 4 1121 839 28 0 83 chrX 70290098 70290290 -96360006 + (GAGAA)n Simple_repeat Simple_repeat 5 180 0 4 1121 249 192 19 0 chrX 70290487 70290539 -96359757 + MTEb LTR MaLR 3 55 -324 4 1121 557 231 142 14 chrX 70290755 70290966 -96359330 + RMER20B LTR ERVK 180 417 -210 4 1121 23 0 0 0 chrX 70293335 70293358 -96356938 + AT_rich Low_complexity Low_complexity 1 23 0 4 1121 207 0 0 0 chrX 70293400 70293423 -96356873 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 4 1121 711 206 0 0 chrX 70293431 70293562 -96356734 - B1_Mus1 SINE Alu -16 132 2 4 1121 257 233 17 0 chrX 70293585 70293645 -96356651 - L1M2 LINE L1 -2293 3850 3790 4 1121 232 280 33 17 chrX 70293643 70293763 -96356533 + L1M3 LINE L1 2713 2834 -3306 4 1121 787 118 0 0 chrX 70295078 70295205 -96355091 - ORR1C2 LTR MaLR -257 127 1 4 1121 434 327 25 32 chrX 70295344 70295622 -96354674 + MamGyp-int LTR Gypsy 106 381 -4681 4 1121 748 133 0 62 chrX 70297027 70297171 -96353125 - B1_Mus1 SINE Alu -6 142 8 4 1121 1435 144 74 21 chrX 70297176 70297459 -96352837 - ORR1B2 LTR MaLR -3 364 67 4 1121 192 40 0 0 chrX 70297545 70297570 -96352726 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 1121 339 226 30 61 chrX 70297729 70297828 -96352468 + RLTR19-int LTR ERVK 3189 3284 -2853 4 1121 4260 37 88 6 chrX 70297896 70298417 -96351879 - LTRIS2 LTR ERV1 0 564 1 4 1121 435 127 0 0 chrX 70298536 70298599 -96351697 + RLTR19-int LTR ERVK 3599 3661 -2476 4 1121 1047 49 0 34 chrX 70298599 70298747 -96351549 + B1_Mus1 SINE Alu 6 148 0 4 1121 500 0 17 0 chrX 70299748 70299808 -96350488 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 1121 288 0 0 0 chrX 70299808 70299839 -96350457 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 1121 198 167 0 0 chrX 70300119 70300155 -96350141 + CT-rich Low_complexity Low_complexity 1 36 0 4 1121 418 299 386 7 chrX 70300249 70300547 -96349749 - Lx8 LINE L1 -214 7259 6849 4 1121 599 341 9 5 chrX 70300546 70300761 -96349535 + Lx8 LINE L1 6455 6670 -803 4 1121 2734 62 8 3 chrX 70300787 70301174 -96349122 + MTB LTR MaLR 12 400 0 4 1121 4076 98 66 0 chrX 70301445 70302257 -96348039 + L1Md_F LINE L1 584 1449 -4434 4 1121 1911 67 4 12 chrX 70302239 70302496 -96347800 - L1_Mm LINE L1 -403 5480 5226 4 1121 253 268 14 0 chrX 70302499 70302570 -96347726 + ORR1D1 LTR MaLR 303 374 0 4 1121 11471 66 15 10 chrX 70302683 70304914 -96345382 - L1_Mus1 LINE L1 -1 6566 4322 4 1121 582 221 102 0 chrX 70305212 70305339 -96344957 - B1F SINE Alu -8 141 2 4 1121 1116 90 14 0 chrX 70305433 70305577 -96344719 + B1_Mus2 SINE Alu 2 147 0 4 1121 279 125 0 93 chrX 70305577 70305674 -96344622 + A-rich Low_complexity Low_complexity 1 88 0 4 1121 489 260 155 14 chrX 70306225 70306373 -96343923 + B3 SINE B2 14 182 -34 4 1121 759 257 0 0 chrX 70307105 70307257 -96343039 - B3 SINE B2 -64 152 1 4 1121 550 142 146 36 chrX 70307531 70307641 -96342655 + URR1A DNA MER1_type 1 122 -104 4 1121 867 173 29 57 chrX 70307914 70308159 -96342137 - RLTR22_Mur LTR ERVK -21 1827 1590 4 1121 378 0 0 0 chrX 70308216 70308258 -96342038 + (A)n Simple_repeat Simple_repeat 1 42 0 4 1121 738 155 34 45 chrX 70308293 70308469 -96341827 - RLTR22_Mur LTR ERVK -990 858 685 4 1121 2002 351 28 34 chrX 70310135 70311175 -96339121 + MamGyp-int LTR Gypsy 80 1113 -3949 4 1121 21 57 0 0 chrX 70312321 70312356 -96337940 + GC_rich Low_complexity Low_complexity 1 35 0 4 1121 209 190 0 23 chrX 70312606 70312649 -96337647 + C-rich Low_complexity Low_complexity 1 42 0 4 1121 263 333 27 41 chrX 70314639 70314786 -96335510 - L1M5 LINE L1 -761 5683 5539 4 1121 445 319 40 126 chrX 70314963 70315032 -96335264 - B4A SINE B4 -20 272 223 4 1121 574 305 45 10 chrX 70315032 70315234 -96335062 - B3 SINE B2 -6 210 2 4 1121 445 319 40 126 chrX 70315234 70315411 -96334885 - B4A SINE B4 -70 222 47 4 1121 186 150 0 0 chrX 70315477 70315517 -96334779 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1121 635 243 71 47 chrX 70315562 70315801 -96334495 - L1MA4 LINE L1 -408 5892 5628 4 1121 532 273 22 83 chrX 70315940 70316168 -96334128 - B3 SINE B2 -2 214 1 4 1121 934 271 103 42 chrX 70316188 70316635 -96333661 - Lx8 LINE L1 -2 7471 6998 4 1121 551 320 0 48 chrX 70316652 70316862 -96333434 + B3 SINE B2 17 216 0 4 1121 315 0 0 0 chrX 70317489 70317524 -96332772 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 1121 578 297 82 57 chrX 70317524 70317894 -96332402 - RLTR18 LTR ERVK -7 609 120 4 1121 472 265 36 18 chrX 70318148 70318313 -96331983 - RLTR18B LTR ERVK -340 172 5 4 1121 189 94 0 0 chrX 70318451 70318483 -96331813 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4 1121 422 332 5 112 chrX 70318523 70318613 -96331683 + B4A SINE B4 7 79 -213 4 1121 623 245 52 21 chrX 70318613 70318805 -96331491 + B3A SINE B2 1 198 0 4 1121 422 332 5 112 chrX 70318805 70318938 -96331358 + B4A SINE B4 80 206 -86 4 1121 239 79 26 0 chrX 70318938 70318976 -96331320 + (AGGGGG)n Simple_repeat Simple_repeat 6 44 0 4 1121 186 43 0 0 chrX 70319124 70319147 -96331149 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1121 186 43 0 0 chrX 70319162 70319185 -96331111 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 4 1121 25 51 0 0 chrX 70319302 70319341 -96330955 + AT_rich Low_complexity Low_complexity 1 39 0 4 1121 425 270 35 0 chrX 70320598 70320713 -96329583 + B1F1 SINE Alu 10 128 -21 4 1121 246 288 0 59 chrX 70321047 70321165 -96329131 + GA-rich Low_complexity Low_complexity 2 112 0 4 1121 409 93 59 4 chrX 70322284 70322372 -96327924 + Lx2 LINE L1 6823 6914 -86 4 1121 218 384 18 0 chrX 70322544 70322656 -96327640 - MIR SINE MIR -133 129 16 4 1121 283 238 0 0 chrX 70324967 70325030 -96325266 - BC1_Mm scRNA scRNA -82 70 8 4 1121 189 0 0 0 chrX 70325327 70325348 -96324948 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 5 1121 190 0 67 0 chrX 70325427 70325457 -96324839 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 5 1121 595 200 71 8 chrX 70325470 70325596 -96324700 + B1_Mur2 SINE Alu 5 138 -11 5 1121 402 21 0 0 chrX 70325596 70325643 -96324653 + (CAAAG)n Simple_repeat Simple_repeat 2 48 0 5 1121 662 258 40 0 chrX 70326581 70326732 -96323564 - ID_B1 SINE B4 -1 223 67 5 1121 824 212 18 5 chrX 70328208 70328403 -96321893 + B3 SINE B2 2 192 -6 5 1121 1506 185 43 46 chrX 70328438 70328599 -96321697 - RMER17C LTR ERVK -2 408 247 5 1121 882 88 0 0 chrX 70328599 70328724 -96321572 + (GGGAGA)n Simple_repeat Simple_repeat 1 125 0 5 1121 369 43 0 0 chrX 70328724 70328770 -96321526 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1121 1506 185 43 46 chrX 70328770 70328797 -96321499 - RMER17C LTR ERVK -164 246 220 5 1121 318 50 0 0 chrX 70328797 70328837 -96321459 + (GGA)n Simple_repeat Simple_repeat 2 41 0 5 1121 1506 198 40 54 chrX 70328837 70329087 -96321209 - RMER17C LTR ERVK -542 416 21 5 1121 1064 158 80 0 chrX 70329265 70329476 -96320820 + L1_Mur3 LINE L1 5218 5423 -457 5 1121 418 319 111 39 chrX 70329476 70329791 -96320505 - RLTR18B LTR ERVK -50 566 120 5 1121 403 278 36 24 chrX 70330048 70330214 -96320082 - RLTR18B LTR ERVK -340 172 5 5 1121 189 94 0 0 chrX 70330352 70330384 -96319912 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 1121 361 349 5 117 chrX 70330424 70330514 -96319782 + B4A SINE B4 7 75 -217 5 1121 566 271 52 21 chrX 70330514 70330706 -96319590 + B3A SINE B2 1 198 0 5 1121 361 349 5 117 chrX 70330706 70330829 -96319467 + B4A SINE B4 76 196 -96 5 1121 1107 0 0 0 chrX 70330829 70330952 -96319344 + (GGGAGA)n Simple_repeat Simple_repeat 2 124 0 5 1121 207 133 0 0 chrX 70331098 70331143 -96319153 + (CAGAGA)n Simple_repeat Simple_repeat 4 48 0 5 1121 221 290 0 14 chrX 70332966 70333036 -96317260 + ID4 SINE ID 13 81 -2 5 1121 567 0 0 0 chrX 70333417 70333480 -96316816 + (TG)n Simple_repeat Simple_repeat 1 63 0 5 1121 796 134 7 47 chrX 70334177 70334326 -96315970 + B1_Mur2 SINE Alu 7 149 0 5 1121 265 375 18 0 chrX 70335378 70335490 -96314806 - MIR SINE MIR -133 129 16 5 1121 997 94 0 0 chrX 70337733 70337871 -96312425 - B1_Mus2 SINE Alu -9 138 1 5 1121 243 0 0 0 chrX 70339067 70339094 -96311202 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1121 358 303 24 16 chrX 70339155 70339279 -96311017 - B4A SINE B4 -165 127 3 5 1121 954 167 0 0 chrX 70339315 70339495 -96310801 + GA-rich Low_complexity Low_complexity 1 180 0 5 1121 183 42 0 0 chrX 70339825 70339849 -96310447 + (GA)n Simple_repeat Simple_repeat 1 24 0 5 1121 211 100 27 41 chrX 70341961 70342034 -96308262 + (CAAA)n Simple_repeat Simple_repeat 1 72 0 5 1121 266 206 32 0 chrX 70343341 70343404 -96306892 - ORR1D2 LTR MaLR -305 65 1 5 1121 343 320 61 31 chrX 70343432 70343693 -96306603 + MERVK26-int LTR ERVK 196 464 -6455 5 1121 267 193 22 78 chrX 70345473 70345563 -96304733 + RMER17C-int LTR ERVK 2452 2536 -702 5 1121 660 87 0 0 chrX 70346220 70346312 -96303984 + (TTC)n Simple_repeat Simple_repeat 2 93 0 5 1121 375 23 0 0 chrX 70346314 70346358 -96303938 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 5 1121 883 115 0 0 chrX 70346358 70346488 -96303808 - B1_Mus1 SINE Alu -10 138 9 5 1121 533 248 7 47 chrX 70346488 70346506 -96303790 - ID_B1 SINE B4 -10 214 73 5 1121 3256 151 93 2 chrX 70346570 70347159 -96303137 - RMER19A LTR ERVK 0 737 95 5 1121 3319 181 123 69 chrX 70347161 70348014 -96302282 + RMER13B LTR ERVK 1 899 -9 5 1121 663 45 0 0 chrX 70348017 70348106 -96302190 - RMER19A LTR ERVK -648 89 1 5 1121 898 294 89 48 chrX 70348558 70348998 -96301298 + MYSERV-int LTR ERVK 4131 4588 -1962 5 1121 541 241 19 80 chrX 70349044 70349256 -96301040 + MYSERV-int LTR ERVK 4588 4786 -1764 5 1121 2269 211 19 32 chrX 70349248 70349776 -96300520 + MERVK26-int LTR ERVK 6397 6917 -2 5 1121 605 254 83 32 chrX 70349932 70350148 -96300148 + RMER20B LTR ERVK 129 355 -272 5 1121 356 183 116 21 chrX 70350155 70350250 -96300046 + RMER20B LTR ERVK 309 412 -215 5 1121 924 148 86 41 chrX 70352225 70352422 -96297874 - URR1B DNA MER1_type 0 225 20 5 1121 526 276 13 4 chrX 70352763 70352941 -96297355 + B3A SINE B2 32 211 -5 5 1121 207 388 35 0 chrX 70355974 70356090 -96294206 - MIR SINE MIR -135 127 8 5 1121 592 244 25 0 chrX 70357776 70357895 -96292401 - ID_B1 SINE B4 0 224 103 5 1121 464 309 72 0 chrX 70357895 70357915 -96292381 - B1F SINE Alu 0 149 1 5 1121 1939 85 0 14 chrX 70358740 70359027 -96291269 - L1Md_F2 LINE L1 -7 6575 6293 5 1121 286 301 39 73 chrX 70359176 70359355 -96290941 - RMER15 LTR ERVL -109 466 294 5 1121 914 207 56 32 chrX 70361261 70361516 -96288780 + RLTR18B LTR ERVK 1 235 -381 5 1121 1082 218 65 60 chrX 70361636 70361987 -96288309 + RMER13A LTR ERVK 103 455 -405 5 1121 3395 97 4 18 chrX 70364042 70364545 -96285751 - RLTR19A LTR ERVK 0 496 1 5 1121 276 72 182 0 chrX 70364815 70365194 -96285102 + (CACTC)n Simple_repeat Simple_repeat 1 448 0 5 1121 719 107 34 53 chrX 70367239 70367597 -96282699 + CT-rich Low_complexity Low_complexity 1 350 0 5 1121 207 186 0 0 chrX 70367590 70367633 -96282663 + C-rich Low_complexity Low_complexity 1 43 0 5 1121 545 275 21 63 chrX 70367666 70367856 -96282440 + ORR1D2 LTR MaLR 2 183 -187 5 1121 308 24 24 0 chrX 70370998 70371039 -96279257 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1121 371 73 18 0 chrX 70371039 70371094 -96279202 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 1121 560 169 6 17 chrX 70375084 70375265 -96275031 + CT-rich Low_complexity Low_complexity 2 180 0 5 1121 792 312 21 38 chrX 70375384 70375674 -96274622 - B4A SINE B4 0 292 8 5 1121 2848 62 8 3 chrX 70375710 70376095 -96274201 - L1Md_F2 LINE L1 -1 6581 6195 5 1121 459 0 0 0 chrX 70376116 70376167 -96274129 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1121 429 20 0 0 chrX 70376169 70376219 -96274077 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1121 263 281 100 27 chrX 70376498 70376648 -96273648 - L1_Rod LINE L1 -3233 2614 2454 5 1121 462 18 0 0 chrX 70376807 70376862 -96273434 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1121 494 75 12 0 chrX 70377470 70377550 -96272746 + (TG)n Simple_repeat Simple_repeat 2 82 0 5 1121 932 304 8 0 chrX 70377629 70377879 -96272417 - B4 SINE B4 -16 276 25 5 1121 246 271 111 9 chrX 70378675 70378783 -96271513 + L1MB3 LINE L1 6005 6123 -60 5 1121 1134 115 16 0 chrX 70379048 70379230 -96271066 + B2_Mm2 SINE B2 6 190 -5 5 1121 315 0 0 0 chrX 70380006 70380041 -96270255 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1121 644 299 71 46 chrX 70380041 70380411 -96269885 - RLTR18 LTR ERVK -7 609 120 5 1121 263 281 100 27 chrX 70380513 70380663 -96269633 + L1_Rod LINE L1 2454 2614 -3233 5 1121 486 0 0 0 chrX 70380942 70380996 -96269300 + (TC)n Simple_repeat Simple_repeat 1 54 0 5 1121 495 0 0 0 chrX 70380998 70381053 -96269243 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1121 2848 62 8 3 chrX 70381074 70381459 -96268837 + L1Md_F2 LINE L1 6195 6581 -1 5 1121 792 312 21 38 chrX 70381495 70381785 -96268511 + B4A SINE B4 8 292 0 5 1121 560 169 6 17 chrX 70381904 70382085 -96268211 + GA-rich Low_complexity Low_complexity 2 180 0 5 1122 371 73 18 0 chrX 70386075 70386130 -96264166 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1122 308 24 24 0 chrX 70386130 70386171 -96264125 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1122 586 275 21 63 chrX 70389313 70389503 -96260793 - ORR1D2 LTR MaLR -187 183 2 5 1122 674 118 31 52 chrX 70389553 70389904 -96260392 + GA-rich Low_complexity Low_complexity 1 343 0 5 1122 297 53 189 7 chrX 70391949 70392242 -96258054 + (GAGTG)n Simple_repeat Simple_repeat 1 346 0 5 1122 200 58 192 0 chrX 70392256 70392360 -96257936 + (GAGTG)n Simple_repeat Simple_repeat 3 126 0 5 1122 3575 97 4 18 chrX 70392630 70393133 -96257163 + RLTR19A LTR ERVK 1 496 0 5 1122 1156 215 65 60 chrX 70395187 70395538 -96254758 - RMER13A LTR ERVK -405 455 103 5 1122 973 202 56 32 chrX 70395658 70395913 -96254383 - RLTR18B LTR ERVK -381 235 1 5 1122 305 251 74 116 chrX 70397809 70397998 -96252298 + RMER15 LTR ERVL 286 466 -109 5 1122 2039 85 0 14 chrX 70398147 70398434 -96251862 + L1Md_F2 LINE L1 6293 6575 -7 5 1122 506 302 72 0 chrX 70399259 70399279 -96251017 + B1F SINE Alu 1 149 0 5 1122 629 244 25 0 chrX 70399279 70399398 -96250898 + ID_B1 SINE B4 103 224 0 5 1122 219 388 35 0 chrX 70401084 70401200 -96249096 + MIR SINE MIR 8 127 -135 5 1122 226 265 23 46 chrX 70403277 70403364 -96246932 + MER34 LTR ERV1 78 162 -380 5 1122 552 256 39 56 chrX 70404243 70404421 -96245875 - B3A SINE B2 -10 206 32 5 1122 985 143 86 41 chrX 70404762 70404959 -96245337 + URR1B DNA MER1_type 20 225 0 5 1122 26 0 0 0 chrX 70406319 70406345 -96243951 + AT_rich Low_complexity Low_complexity 1 26 0 5 1122 741 274 107 32 chrX 70406883 70407196 -96243100 - RMER20B LTR ERVK -57 459 129 5 1122 527 183 120 17 chrX 70407358 70407475 -96242821 - MERVK26-int LTR ERVK -2 6917 6789 5 1122 5342 224 136 73 chrX 70407476 70409276 -96241020 + Lx4A LINE L1 2892 4826 -1051 5 1122 1345 107 0 5 chrX 70409276 70409464 -96240832 + B2_Mm2 SINE B2 1 187 -8 5 1122 5342 224 136 73 chrX 70409464 70409542 -96240754 + Lx4A LINE L1 4827 4926 -951 5 1122 240 35 0 0 chrX 70409542 70409571 -96240725 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 5 1122 947 146 0 0 chrX 70409578 70409715 -96240581 - B1_Mus2 SINE Alu -6 141 5 5 1122 5342 219 124 65 chrX 70409715 70410536 -96239760 + Lx4A LINE L1 4927 5896 -1101 5 1122 2736 188 30 15 chrX 70410536 70411071 -96239225 + Lx4A LINE L1 6515 7057 -1 5 1122 22 0 0 0 chrX 70411071 70411093 -96239203 + AT_rich Low_complexity Low_complexity 1 22 0 5 1122 4529 196 42 13 chrX 70411719 70412593 -96237703 - RMER19B LTR ERVK -2 900 1 6 1122 345 24 0 0 chrX 70413637 70413679 -96236617 + (T)n Simple_repeat Simple_repeat 1 42 0 6 1122 38573 31 0 0 chrX 70413718 70420395 -96229901 - L1Md_T LINE L1 0 6585 1 6 1122 297 68 0 0 chrX 70422666 70422710 -96227586 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 6 1122 352 135 28 37 chrX 70423560 70423668 -96226628 + (TA)n Simple_repeat Simple_repeat 2 108 0 6 1122 6909 115 12 2 chrX 70424289 70425391 -96224905 - L1_Mus3 LINE L1 -6 6632 5515 6 1122 18781 147 22 22 chrX 70425409 70427734 -96222562 - L1_Mus3 LINE L1 -1270 4613 2285 6 1122 2631 79 0 3 chrX 70427734 70428077 -96222219 + ORR1A1 LTR MaLR 1 342 -4 6 1122 18781 147 22 22 chrX 70428077 70428288 -96222008 - L1_Mus3 LINE L1 -3599 2284 2071 6 1122 180 0 0 0 chrX 70428288 70428308 -96221988 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 1122 18781 157 26 19 chrX 70428308 70430010 -96220286 - L1_Mus3 LINE L1 -3813 2070 361 6 1122 941 215 74 37 chrX 70430462 70430679 -96219617 + RLTR41 LTR ERV1 222 446 0 6 1122 1431 221 48 9 chrX 70430683 70431013 -96219283 - ORR1B1-int LTR MaLR -852 728 325 6 1122 2900 104 83 2 chrX 70431013 70431505 -96218791 - RLTR47_MM LTR ERV1 0 532 1 6 1122 618 59 47 0 chrX 70431703 70431788 -96218508 + RMER19A LTR ERVK 1 89 -648 6 1122 3546 176 123 69 chrX 70431791 70432644 -96217652 - RMER13B LTR ERVK -9 899 1 6 1122 3402 152 95 2 chrX 70432646 70433234 -96217062 + RMER19A LTR ERVK 95 737 0 6 1122 398 296 41 82 chrX 70433300 70433317 -96216979 + B4 SINE B4 76 216 -76 6 1122 903 123 0 0 chrX 70433317 70433447 -96216849 + B1_Mus1 SINE Alu 9 138 -10 6 1122 444 37 0 0 chrX 70433447 70433501 -96216795 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 6 1122 1237 7 0 26 chrX 70433503 70433659 -96216637 + (GAA)n Simple_repeat Simple_repeat 2 153 0 6 1122 308 202 11 77 chrX 70434322 70434413 -96215883 - RMER17C-int LTR ERVK -702 2536 2452 6 1122 364 213 68 41 chrX 70436311 70436458 -96213838 - MERVK26-int LTR ERVK -6573 346 196 6 1122 283 206 32 0 chrX 70436486 70436549 -96213747 + ORR1D2 LTR MaLR 1 65 -305 6 1122 183 42 0 0 chrX 70437609 70437633 -96212663 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 6 1122 207 0 0 0 chrX 70437882 70437905 -96212391 + (T)n Simple_repeat Simple_repeat 1 23 0 6 1122 252 22 43 22 chrX 70437925 70437971 -96212325 + (TTTG)n Simple_repeat Simple_repeat 1 47 0 6 1122 183 42 0 0 chrX 70440080 70440104 -96210192 + (TC)n Simple_repeat Simple_repeat 1 24 0 6 1122 807 201 0 0 chrX 70440438 70440617 -96209679 + CT-rich Low_complexity Low_complexity 2 180 0 6 1122 388 303 24 16 chrX 70440656 70440780 -96209516 + B4A SINE B4 3 127 -165 6 1122 207 0 0 0 chrX 70440841 70440864 -96209432 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1122 296 263 177 10 chrX 70440989 70441085 -96209211 + B4A SINE B4 179 290 -2 6 1122 239 243 40 26 chrX 70441933 70442009 -96208287 + ID4 SINE ID 3 79 -4 6 1122 991 109 0 0 chrX 70442052 70442189 -96208107 + B1_Mus2 SINE Alu 1 137 -10 6 1122 236 349 45 9 chrX 70444431 70444541 -96205755 + MIR SINE MIR 16 129 -133 6 1122 779 141 7 47 chrX 70445594 70445743 -96204553 - B1_Mur2 SINE Alu 0 149 7 6 1122 241 135 135 0 chrX 70445761 70445813 -96204483 - B4A SINE B4 -73 219 161 6 1122 459 0 0 0 chrX 70446440 70446491 -96203805 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1122 423 0 0 0 chrX 70448778 70448825 -96201471 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1122 703 208 90 32 chrX 70448843 70449032 -96201264 + RLTR31_Mur LTR ERVK 354 553 0 6 1122 243 0 0 0 chrX 70449033 70449060 -96201236 + (CAA)n Simple_repeat Simple_repeat 2 28 0 6 1122 1786 206 23 2 chrX 70449067 70449465 -96200831 - ORR1D-int LTR MaLR -847 523 118 6 1122 626 58 0 11 chrX 70449668 70449756 -96200540 + (GA)n Simple_repeat Simple_repeat 1 87 0 6 1122 2014 184 15 35 chrX 70450254 70450660 -96199636 - RMER10B LTR ERVL 0 398 1 6 1122 231 301 81 34 chrX 70451541 70451689 -96198607 + L1M1 LINE L1 5476 5630 -673 6 1122 311 224 81 63 chrX 70451828 70451999 -96198297 - RLTR13D3 LTR ERVK 0 1114 983 6 1122 3356 41 5 0 chrX 70452208 70452602 -96197694 - MTA_Mm LTR MaLR 0 396 1 6 1122 232 210 158 12 chrX 70453080 70453162 -96197134 - RLTR13D3 LTR ERVK -1020 94 1 6 1122 634 280 59 22 chrX 70453544 70453849 -96196447 + Lx7 LINE L1 5588 5899 -1561 6 1122 1644 180 5 158 chrX 70454137 70454580 -96195716 - ORR1C1 LTR MaLR -1 377 3 6 1122 360 346 35 77 chrX 70454829 70455039 -96195257 + B4A SINE B4 24 233 -59 6 1122 452 97 0 0 chrX 70455596 70455658 -96194638 - L1_Mur2 LINE L1 -696 5181 5120 6 1122 224 356 54 8 chrX 70455708 70455838 -96194458 - MIRb SINE MIR -80 188 53 6 1122 7334 185 22 42 chrX 70456185 70458346 -96191950 - Lx7 LINE L1 -134 7562 5218 6 1122 1357 170 12 173 chrX 70458521 70459085 -96191211 + RMER17C LTR ERVK 1 439 -519 6 1122 792 236 72 0 chrX 70459121 70459316 -96190980 - B3 SINE B2 -6 210 2 6 1122 633 271 40 0 chrX 70460774 70460925 -96189371 + ID_B1 SINE B4 67 223 -1 6 1122 321 26 0 0 chrX 70461864 70461902 -96188394 + (CTTTG)n Simple_repeat Simple_repeat 1 38 0 6 1122 598 194 72 8 chrX 70461902 70462027 -96188269 - B1_Mur2 SINE Alu -12 137 5 6 1122 264 30 0 0 chrX 70462136 70462169 -96188127 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 1122 269 254 0 0 chrX 70462463 70462526 -96187770 + BC1_Mm scRNA scRNA 8 70 -82 6 1122 222 387 27 0 chrX 70464831 70464942 -96185354 + MIR SINE MIR 16 129 -133 6 1122 403 143 65 0 chrX 70465114 70465191 -96185105 - Lx2 LINE L1 -87 6910 6829 6 1122 246 288 0 59 chrX 70466319 70466437 -96183859 + CT-rich Low_complexity Low_complexity 2 112 0 6 1122 425 270 35 0 chrX 70466771 70466886 -96183410 - B1F1 SINE Alu -21 128 10 6 1122 243 122 0 0 chrX 70468280 70468329 -96181967 + (TCTCTG)n Simple_repeat Simple_repeat 6 54 0 6 1122 276 304 151 91 chrX 70468395 70468479 -96181817 - B4A SINE B4 0 292 209 6 1122 741 98 0 0 chrX 70468479 70468591 -96181705 + (TC)n Simple_repeat Simple_repeat 1 112 0 6 1122 283 304 151 91 chrX 70468591 70468705 -96181591 - B4 SINE B4 -84 208 82 6 1122 582 253 59 0 chrX 70468748 70468918 -96181378 - B3A SINE B2 -18 180 1 6 1122 189 94 0 0 chrX 70469048 70469080 -96181216 + (TTG)n Simple_repeat Simple_repeat 2 33 0 6 1122 427 268 16 19 chrX 70469214 70469384 -96180912 + RLTR18 LTR ERVK 1 172 -340 6 1122 600 312 69 50 chrX 70469559 70469929 -96180367 + RLTR18 LTR ERVK 120 609 -7 6 1122 387 0 0 0 chrX 70469929 70469972 -96180324 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 1122 1072 94 147 0 chrX 70470755 70470925 -96179371 - B2_Mm2 SINE B2 0 195 1 6 1122 448 297 32 32 chrX 70471211 70471399 -96178897 - B3A SINE B2 -10 188 1 6 1122 309 312 56 45 chrX 70471870 70472048 -96178248 + RLTR42-int LTR ERVK 1220 1399 -4123 6 1122 237 182 0 0 chrX 70472466 70472521 -96177775 + GA-rich Low_complexity Low_complexity 3 57 0 6 1122 410 192 0 0 chrX 70472577 70472650 -96177646 - B3A SINE B2 -125 73 1 6 1122 21 0 0 0 chrX 70472930 70472951 -96177345 + AT_rich Low_complexity Low_complexity 1 21 0 6 1122 206 200 20 20 chrX 70474861 70474912 -96175384 + T-rich Low_complexity Low_complexity 5 55 0 6 1122 677 247 84 17 chrX 70474924 70475163 -96175133 - L1MA4 LINE L1 -395 5905 5651 6 1122 418 380 56 24 chrX 70475745 70476122 -96174174 - ERVL-E-int LTR ERVL -813 4854 4466 6 1122 375 281 0 0 chrX 70476457 70476539 -96173757 - BC1_Mm scRNA scRNA -70 82 1 6 1122 391 361 10 19 chrX 70476718 70476927 -96173369 + B4A SINE B4 33 239 -53 6 1122 315 0 0 0 chrX 70477217 70477252 -96173044 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1122 600 312 69 50 chrX 70477252 70477622 -96172674 - RLTR18 LTR ERVK -7 609 120 6 1122 427 268 16 19 chrX 70477798 70477968 -96172328 - RLTR18 LTR ERVK -340 172 1 6 1122 189 94 0 0 chrX 70478102 70478134 -96172162 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6 1122 582 253 59 0 chrX 70478264 70478434 -96171862 + B3A SINE B2 1 180 -18 6 1122 292 355 33 0 chrX 70478477 70478598 -96171698 + B4 SINE B4 82 206 -86 6 1122 696 103 0 0 chrX 70478598 70478705 -96171591 + (GA)n Simple_repeat Simple_repeat 2 108 0 6 1122 291 317 10 0 chrX 70478775 70478876 -96171420 + (CA)n Simple_repeat Simple_repeat 1 102 0 6 1122 239 98 0 38 chrX 70478877 70478930 -96171366 + (CAGAGA)n Simple_repeat Simple_repeat 2 52 0 6 1122 443 288 30 8 chrX 70480322 70480455 -96169841 + B1F1 SINE Alu 10 145 -4 6 1122 246 288 0 59 chrX 70480769 70480887 -96169409 + GA-rich Low_complexity Low_complexity 2 112 0 6 1122 7993 36 0 0 chrX 70481702 70482626 -96167670 + L1Md_T LINE L1 5657 6580 -2 6 1122 384 77 62 0 chrX 70482945 70483010 -96167286 + Lx2 LINE L1 6842 6910 -87 6 1122 233 378 27 0 chrX 70483182 70483293 -96167003 - MIR SINE MIR -133 129 16 6 1122 283 238 0 0 chrX 70485599 70485662 -96164634 - BC1_Mm scRNA scRNA -82 70 8 6 1122 192 40 0 0 chrX 70485958 70485983 -96164313 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 6 1122 585 200 71 8 chrX 70486091 70486217 -96164079 + B1_Mur2 SINE Alu 5 138 -11 6 1122 198 0 0 0 chrX 70486217 70486239 -96164057 + (CAAAG)n Simple_repeat Simple_repeat 2 23 0 6 1122 621 267 47 0 chrX 70487177 70487327 -96162969 - ID_B1 SINE B4 -1 223 67 6 1122 832 211 18 0 chrX 70488801 70488972 -96161324 + B3 SINE B2 2 175 -41 6 1122 1408 185 74 40 chrX 70489031 70489200 -96161096 - RMER17C LTR ERVK -2 408 242 6 1122 630 79 0 0 chrX 70489200 70489289 -96161007 + (GA)n Simple_repeat Simple_repeat 2 90 0 6 1122 1408 201 67 42 chrX 70489289 70489546 -96160750 - RMER17C LTR ERVK -523 435 20 6 1122 7386 184 23 43 chrX 70489744 70491884 -96158412 + Lx7 LINE L1 5218 7562 -134 7 1122 225 328 62 15 chrX 70492229 70492359 -96157937 + MIRb SINE MIR 53 188 -80 7 1122 452 97 0 0 chrX 70492409 70492471 -96157825 + L1_Mur2 LINE L1 5120 5181 -696 7 1122 540 45 0 0 chrX 70492572 70492639 -96157657 + (TC)n Simple_repeat Simple_repeat 1 67 0 7 1122 360 346 35 77 chrX 70493083 70493293 -96157003 - B4A SINE B4 -59 233 24 7 1122 1644 180 5 158 chrX 70493542 70493985 -96156311 + ORR1C1 LTR MaLR 3 377 -1 7 1122 634 280 59 22 chrX 70494273 70494578 -96155718 - Lx7 LINE L1 -1561 5899 5588 7 1122 232 210 158 12 chrX 70494960 70495042 -96155254 + RLTR13D3 LTR ERVK 1 94 -1020 7 1122 3356 41 5 0 chrX 70495520 70495914 -96154382 + MTA_Mm LTR MaLR 1 396 0 7 1122 311 224 81 63 chrX 70496123 70496294 -96154002 + RLTR13D3 LTR ERVK 983 1114 0 7 1122 231 301 81 34 chrX 70496434 70496582 -96153714 - L1M1 LINE L1 -673 5630 5476 7 1122 2065 179 15 30 chrX 70497463 70497867 -96152429 + RMER10B LTR ERVL 1 398 0 7 1122 764 48 0 9 chrX 70498366 70498472 -96151824 + (TC)n Simple_repeat Simple_repeat 1 105 0 7 1122 1742 212 23 2 chrX 70498677 70499075 -96151221 + ORR1D-int LTR MaLR 118 523 -847 7 1122 189 0 0 0 chrX 70499082 70499103 -96151193 + (TTG)n Simple_repeat Simple_repeat 2 22 0 7 1122 703 208 90 32 chrX 70499104 70499293 -96151003 - RLTR31_Mur LTR ERVK 0 553 354 7 1122 426 20 0 0 chrX 70499311 70499362 -96150934 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1122 238 284 27 13 chrX 70501198 70501273 -96149023 + ID4 SINE ID 6 81 -2 1 1122 597 28 0 0 chrX 70501654 70501725 -96148571 + (TG)n Simple_repeat Simple_repeat 1 71 0 2 1122 268 135 135 0 chrX 70502352 70502404 -96147892 + B4A SINE B4 161 219 -73 3 1122 845 141 7 47 chrX 70502422 70502571 -96147725 + B1_Mur2 SINE Alu 7 149 0 4 1122 276 378 36 18 chrX 70503558 70503725 -96146571 - MIR SINE MIR -77 185 16 5 1122 1056 100 0 0 chrX 70505967 70506107 -96144189 - B1_Mus2 SINE Alu -7 140 1 6 1122 243 243 40 26 chrX 70506150 70506226 -96144070 - ID4 SINE ID -4 79 3 7 1122 276 274 177 10 chrX 70507073 70507169 -96143127 - B4A SINE B4 -2 290 179 8 1122 225 0 0 0 chrX 70507294 70507319 -96142977 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 9 1122 369 293 34 25 chrX 70507362 70507502 -96142794 - B4A SINE B4 -148 144 3 8 1122 1065 98 0 19 chrX 70507535 70507743 -96142553 + (GAAA)n Simple_repeat Simple_repeat 1 203 0 1 1122 936 102 24 12 chrX 70508036 70508204 -96142092 + (GGGAGA)n Simple_repeat Simple_repeat 3 172 0 1 1122 273 179 0 0 chrX 70510335 70510419 -96139877 + A-rich Low_complexity Low_complexity 1 84 0 1 1122 266 222 32 0 chrX 70511717 70511780 -96138516 - ORR1D2 LTR MaLR -305 65 1 1 1122 597 333 0 0 chrX 70512733 70512943 -96137353 + MYSERV-int LTR ERVK 3408 3617 -1643 1 1122 31 44 0 0 chrX 70513057 70513102 -96137194 + AT_rich Low_complexity Low_complexity 1 45 0 1 1122 30 0 0 0 chrX 70513402 70513432 -96136864 + AT_rich Low_complexity Low_complexity 1 30 0 1 140 36758 32 1 0 chrX 70513434 70520538 -96129758 - L1Md_T LINE L1 0 6585 1 1 1123 297 202 11 77 chrX 70520710 70520801 -96129495 + RMER17C-int LTR ERVK 2452 2536 -702 1 1123 951 96 0 0 chrX 70521465 70521601 -96128695 + (TTCTCC)n Simple_repeat Simple_repeat 3 138 0 1 1123 309 89 0 0 chrX 70521612 70521657 -96128639 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 2 1123 1007 93 7 0 chrX 70521657 70521796 -96128500 - B1_Mus1 SINE Alu 0 148 9 2 1123 427 269 46 78 chrX 70521659 70521812 -96128484 - B4A SINE B4 -68 224 77 2 1123 3401 153 93 2 chrX 70521878 70522467 -96127829 - RMER19A LTR ERVK 0 737 95 2 1123 3618 175 123 69 chrX 70522469 70523322 -96126974 + RMER13B LTR ERVK 1 899 -9 2 1123 614 59 47 0 chrX 70523325 70523410 -96126886 - RMER19A LTR ERVK -648 89 1 2 1123 1366 279 66 61 chrX 70523866 70524519 -96125777 + MYSERV-int LTR ERVK 4131 4786 -1764 1 1123 2182 213 19 32 chrX 70524511 70525039 -96125257 + MERVK26-int LTR ERVK 6397 6917 -2 2 1123 660 246 65 98 chrX 70525136 70525411 -96124885 + RMER20B LTR ERVK 90 355 -272 2 1123 380 183 116 21 chrX 70525418 70525513 -96124783 + RMER20B LTR ERVK 309 412 -215 2 1123 21 0 0 0 chrX 70526109 70526130 -96124166 + AT_rich Low_complexity Low_complexity 1 21 0 2 1123 988 143 86 41 chrX 70527486 70527683 -96122613 - URR1B DNA MER1_type 0 225 20 2 1123 543 256 39 56 chrX 70528024 70528202 -96122094 + B3A SINE B2 32 206 -10 3 1123 221 388 35 0 chrX 70531251 70531367 -96118929 - MIR SINE MIR -135 127 8 3 1123 593 270 41 10 chrX 70533031 70533053 -96117243 - ID_B1 SINE B4 -43 249 86 3 1123 473 304 80 0 chrX 70533053 70533191 -96117105 - B1F SINE Alu 0 149 1 3 1123 2029 88 0 14 chrX 70534016 70534303 -96115993 - L1Md_F2 LINE L1 -7 6575 6293 3 1123 336 281 53 90 chrX 70534452 70534640 -96115656 - RMER15 LTR ERVL -109 466 286 3 1123 991 203 56 33 chrX 70536537 70536793 -96113503 + RLTR18B LTR ERVK 1 235 -381 3 1123 1114 224 66 57 chrX 70536913 70537263 -96113033 + RMER13A LTR ERVK 103 455 -405 3 1123 3558 101 4 18 chrX 70539176 70539679 -96110617 - RLTR19A LTR ERVK 0 496 1 3 1123 405 152 41 15 chrX 70541650 70541851 -96108445 + (CA)n Simple_repeat Simple_repeat 1 206 0 3 1123 37925 60 1 23 chrX 70545355 70552239 -96098057 - L1Md_T LINE L1 0 6582 99 4 1123 2228 213 10 20 chrX 70552253 70553054 -96097242 - L1Md_F LINE L1 -5923 596 2 4 1123 180 0 0 0 chrX 70553582 70553602 -96096694 + (TC)n Simple_repeat Simple_repeat 1 20 0 4 1123 219 242 15 0 chrX 70553640 70553778 -96096518 + (TCTG)n Simple_repeat Simple_repeat 1 140 0 4 1123 837 323 21 35 chrX 70553791 70554080 -96096216 - B4A SINE B4 0 292 8 4 1123 198 0 0 0 chrX 70554107 70554129 -96096167 + (GA)n Simple_repeat Simple_repeat 1 22 0 4 1123 431 362 40 0 chrX 70554584 70554761 -96095535 + B4A SINE B4 80 263 -29 4 1123 186 305 75 70 chrX 70555430 70555631 -96094665 + L2 LINE L2 733 934 -2485 4 1123 1412 145 87 0 chrX 70555945 70556186 -96094110 - ORR1B1 LTR MaLR -2 392 131 4 1123 245 326 129 20 chrX 70556384 70556531 -96093765 + MER5A DNA MER1_type 26 188 -1 4 1123 1429 57 11 0 chrX 70556731 70556908 -96093388 - B2_Mm1t SINE B2 -14 179 1 5 1123 282 324 18 18 chrX 70558290 70558400 -96091896 + PB1D10 SINE Alu 1 110 -7 5 1123 459 0 0 0 chrX 70559357 70559408 -96090888 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 1123 3197 89 69 0 chrX 70559519 70559966 -96090330 + L1VL4 LINE L1 290 767 -5535 5 1123 2503 65 0 0 chrX 70559966 70560276 -96090020 + L1_Mus1 LINE L1 6245 6554 -13 5 1123 377 337 96 25 chrX 70560498 70560854 -96089442 + L1M7 LINE L1 1289 1669 -4549 5 1123 252 261 0 0 chrX 70561292 70561361 -96088935 + A-rich Low_complexity Low_complexity 1 69 0 5 1123 699 235 132 32 chrX 70561395 70561584 -96088712 - B3 SINE B2 -8 208 1 5 1123 340 77 0 0 chrX 70561669 70561721 -96088575 - L1_Mur2 LINE L1 -2489 3388 3337 5 1123 10926 133 25 21 chrX 70561722 70563053 -96087243 - L1_Mur2 LINE L1 -2512 3365 2052 5 1123 315 0 0 0 chrX 70563053 70563088 -96087208 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1123 10926 133 25 21 chrX 70563088 70563692 -96086604 - L1_Mur2 LINE L1 -3826 2051 1423 5 1123 3990 121 0 24 chrX 70563682 70564307 -96085989 + L1_Mur2 LINE L1 3366 3975 -1902 6 1123 276 70 0 23 chrX 70564320 70564364 -96085932 - L1_Mur2 LINE L1 -1849 4028 3986 6 1123 297 292 45 36 chrX 70564364 70564474 -96085822 + ID_B1 SINE B4 86 196 -28 6 1123 328 203 0 0 chrX 70564661 70564720 -96085576 + L1MA6 LINE L1 6063 6121 -179 6 1123 593 340 35 0 chrX 70564730 70564927 -96085369 + B4A SINE B4 20 223 -69 6 1123 549 318 26 31 chrX 70565593 70565820 -96084476 + MLT1D LTR MaLR 22 247 -258 6 1123 4244 160 77 83 chrX 70565821 70565936 -96084360 + RMER19B LTR ERVK 1 79 -823 6 1123 1674 26 5 0 chrX 70565936 70566127 -96084169 - B2_Mm1t SINE B2 0 193 2 6 1123 4244 160 77 83 chrX 70566127 70566918 -96083378 + RMER19B LTR ERVK 80 902 0 6 1123 488 281 129 108 chrX 70567024 70567403 -96082893 + MT2A LTR ERVL 3 389 -144 6 1123 852 255 12 91 chrX 70568069 70568388 -96081908 + MT2B LTR ERVL 306 599 -2 6 1123 455 39 0 0 chrX 70568914 70568965 -96081331 + L1Md_F2 LINE L1 5536 5586 -297 7 1123 8523 30 1 7 chrX 70568965 70569967 -96080329 + L1Md_F2 LINE L1 5587 6582 0 7 1123 1365 94 15 25 chrX 70570092 70570289 -96080007 + B2_Mm2 SINE B2 1 195 0 7 1123 3978 82 4 4 chrX 70570483 70571011 -96079285 - Lx3_Mus LINE L1 -282 6727 6200 7 1123 912 269 139 32 chrX 70572235 70572573 -96077723 + MTEa LTR MaLR 2 375 -4 7 1123 44 20 0 0 chrX 70574027 70574078 -96076218 + AT_rich Low_complexity Low_complexity 1 51 0 7 1123 372 364 65 65 chrX 70574117 70574393 -96075903 - B4 SINE B4 -16 276 1 7 1123 240 189 0 0 chrX 70574396 70574449 -96075847 - MIRm SINE MIR -103 165 114 7 1123 325 326 106 86 chrX 70575399 70575654 -96074642 + Charlie1b DNA MER1_type 3 262 -261 7 1123 330 314 9 9 chrX 70575697 70575803 -96074493 + B4A SINE B4 185 290 -2 7 1123 39 74 0 0 chrX 70575895 70575976 -96074320 + AT_rich Low_complexity Low_complexity 1 81 0 7 1123 186 128 0 0 chrX 70576091 70576130 -96074166 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 8 1123 1171 62 14 0 chrX 70576140 70576286 -96074010 - B1_Mus1 SINE Alu 0 148 1 8 1123 287 293 48 24 chrX 70576326 70576410 -96073886 + ID_B1 SINE B4 84 169 -55 8 1123 724 129 8 8 chrX 70576454 70576571 -96073725 + B1_Mur1 SINE Alu 23 139 -10 8 1123 195 42 0 0 chrX 70576796 70576820 -96073476 + (TG)n Simple_repeat Simple_repeat 2 25 0 8 1123 320 262 0 0 chrX 70576835 70576919 -96073377 - MLT1B LTR MaLR -213 177 94 8 1123 566 45 38 16 chrX 70576924 70577013 -96073283 - L1Md_F2 LINE L1 -692 5944 5856 8 1123 5477 41 1 12 chrX 70577014 70577686 -96072610 + L1Md_F2 LINE L1 5918 6582 0 8 1123 601 341 26 23 chrX 70578434 70578743 -96071553 - MLT1E2 LTR MaLR -19 608 299 8 1123 412 0 73 0 chrX 70579419 70579487 -96070809 + (TCTCCC)n Simple_repeat Simple_repeat 2 74 0 8 1123 1477 189 112 55 chrX 70579499 70579884 -96070412 + MTD LTR MaLR 13 419 0 8 1123 2557 102 131 2 chrX 70580282 70580703 -96069593 - IAPLTR2_Mm LTR ERVK 0 475 1 9 1123 412 331 25 32 chrX 70581262 70581540 -96068756 - MamGyp-int LTR Gypsy -4681 381 106 9 1123 1288 137 23 5 chrX 70581764 70581984 -96068312 + RLTR26 LTR ERVK 275 498 -144 9 1123 694 140 40 34 chrX 70582015 70582163 -96068133 + RLTR26 LTR ERVK 494 642 0 9 1123 653 231 131 44 chrX 70582645 70582910 -96067386 - MT2B LTR ERVL -88 513 90 9 1123 27 0 0 0 chrX 70582933 70582960 -96067336 + AT_rich Low_complexity Low_complexity 1 27 0 9 1123 1371 213 11 7 chrX 70582967 70583237 -96067059 + Lx5 LINE L1 6776 7046 -4 9 1123 360 64 0 0 chrX 70583237 70583284 -96067012 + (GAAA)n Simple_repeat Simple_repeat 3 49 0 9 1123 428 193 0 22 chrX 70583285 70583375 -96066921 - MT2B LTR ERVL -445 88 1 9 1123 1025 69 23 0 chrX 70583428 70583601 -96066695 + (GA)n Simple_repeat Simple_repeat 2 178 0 9 1123 1581 117 129 6 chrX 70583601 70583852 -96066444 - RMER4A LTR ERVK -118 348 57 9 1123 240 59 0 0 chrX 70583852 70583886 -96066410 + (TA)n Simple_repeat Simple_repeat 2 35 0 9 1123 1581 117 129 6 chrX 70583886 70583942 -96066354 - RMER4A LTR ERVK -410 56 2 9 1123 356 253 208 45 chrX 70583950 70584330 -96065966 - L1M5 LINE L1 -2645 3501 3060 1 1123 295 276 138 26 chrX 70584348 70584579 -96065717 + L1M4 LINE L1 3684 3940 -2206 1 1123 1631 53 5 9 chrX 70584592 70584802 -96065494 - L1Md_F3 LINE L1 -14 6570 6362 1 1123 2508 38 0 0 chrX 70584802 70585090 -96065206 + L1Md_F3 LINE L1 6042 6329 -253 1 1123 598 36 0 3 chrX 70585093 70585168 -96065128 + L1Md_F3 LINE L1 6282 6348 -236 1 1123 906 82 44 0 chrX 70585168 70585303 -96064993 - B2_Mm2 SINE B2 -8 187 47 1 1123 982 105 114 30 chrX 70585316 70585483 -96064813 - B2_Mm2 SINE B2 -14 181 1 1 1123 378 337 80 0 chrX 70585526 70585701 -96064595 + L1M4 LINE L1 3975 4163 -1983 1 1123 207 0 0 0 chrX 70586121 70586144 -96064152 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1123 1385 264 138 39 chrX 70586158 70586924 -96063372 + L1ME2z LINE L1 5323 6164 -280 1 1123 400 209 0 65 chrX 70586959 70587051 -96063245 - B4 SINE B4 -206 86 1 1 1123 258 32 0 0 chrX 70587142 70587173 -96063123 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1123 614 242 167 30 chrX 70590544 70590871 -96059425 - MTD LTR MaLR 0 419 11 1 1123 282 276 80 0 chrX 70591223 70591341 -96058955 - L1M2 LINE L1 -341 5815 5680 1 1123 21 0 0 0 chrX 70591353 70591374 -96058922 + AT_rich Low_complexity Low_complexity 1 21 0 1 1123 189 250 89 0 chrX 70592871 70592927 -96057369 - L2b LINE L2 -205 3170 3110 1 1123 494 282 78 14 chrX 70594043 70594290 -96056006 - L1MEc LINE L1 -3824 3182 2923 1 1123 236 129 139 28 chrX 70594562 70594634 -96055662 - L1MEc LINE L1 -4979 2355 2276 1 1123 272 123 145 40 chrX 70594739 70594815 -96055481 - L1MEc LINE L1 -5220 1867 1784 1 1123 430 303 112 21 chrX 70595470 70595703 -96054593 - L1MEc LINE L1 -6114 973 720 1 1123 643 284 0 0 chrX 70597456 70597590 -96052706 + RSINE1 SINE B4 12 145 -20 1 1123 320 279 0 0 chrX 70597678 70597757 -96052539 - U2 snRNA snRNA -91 97 19 1 1123 577 197 155 5 chrX 70600099 70600318 -96049978 - Kanga2_a DNA Tc2 -83 805 554 1 1123 499 333 94 18 chrX 70600477 70600700 -96049596 - Kanga2_a DNA Tc2 -599 289 50 1 1123 285 204 20 79 chrX 70603260 70603361 -96046935 + MLT1M LTR MaLR 87 181 -491 1 1123 321 238 93 19 chrX 70604309 70604416 -96045880 + MIRm SINE MIR 157 271 -5 1 1123 1554 47 5 5 chrX 70605041 70605233 -96045063 - B2_Mm1a SINE B2 0 193 2 1 1123 260 186 68 0 chrX 70606015 70606074 -96044222 + B4A SINE B4 84 146 -146 1 1123 414 224 20 0 chrX 70606022 70606120 -96044176 + PB1D10 SINE Alu 9 108 -9 1 1123 251 295 51 0 chrX 70606216 70606294 -96044002 - L2c LINE L2 -3 3384 3303 1 1123 1649 151 147 9 chrX 70606386 70606726 -96043570 + MTC LTR MaLR 27 413 -8 1 1123 469 222 22 213 chrX 70607659 70607842 -96042454 - MTE2b LTR MaLR -231 148 1 1 1123 385 245 43 0 chrX 70608057 70608151 -96042145 - RSINE1 SINE B4 -27 138 41 1 1123 27 0 0 0 chrX 70608457 70608484 -96041812 + AT_rich Low_complexity Low_complexity 1 27 0 1 1123 1694 195 28 78 chrX 70608688 70609121 -96041175 + MTD LTR MaLR 1 411 -8 1 1123 666 110 18 9 chrX 70609601 70609711 -96040585 + PB1D9 SINE Alu 10 120 0 1 1123 237 309 15 0 chrX 70610194 70610262 -96040034 - ID4 SINE ID -3 80 12 1 1123 1150 70 0 7 chrX 70610682 70610827 -96039469 + B1_Mm SINE Alu 1 144 -3 1 1123 444 118 0 0 chrX 70610827 70610895 -96039401 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 1123 192 77 0 0 chrX 70610905 70610931 -96039365 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1123 765 204 0 0 chrX 70610951 70611088 -96039208 - RSINE1 SINE B4 -23 142 6 1 1123 315 0 0 0 chrX 70611354 70611389 -96038907 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1123 1236 203 8 35 chrX 70611737 70611997 -96038299 - L1_Rod LINE L1 -173 5674 5422 1 1123 1495 258 108 54 chrX 70611997 70612609 -96037687 - RMER19A LTR ERVK 0 737 1 1 1123 2258 185 70 23 chrX 70612618 70613149 -96037147 - L1_Rod LINE L1 -430 5417 4862 1 1123 559 197 0 76 chrX 70613151 70613283 -96037013 - MT2A LTR ERVL -69 464 343 1 1123 582 299 7 0 chrX 70613356 70613510 -96036786 - RSINE1 SINE B4 -7 158 4 1 1123 430 282 33 13 chrX 70613600 70613751 -96036545 - L1MC LINE L1 -2199 5683 5530 1 1123 33429 92 13 14 chrX 70614005 70620171 -96030125 - L1_Mus1 LINE L1 0 6567 409 1 1123 627 270 142 20 chrX 70620701 70621003 -96029293 + Lx8 LINE L1 7110 7448 -25 1 1123 2660 75 3 23 chrX 70621027 70621380 -96028916 - ORR1A1 LTR MaLR 0 346 1 1 1123 510 180 40 0 chrX 70621499 70621599 -96028697 - ORR1D2 LTR MaLR -266 104 1 1 1123 800 317 78 26 chrX 70621634 70622097 -96028199 - MER90 LTR ERV1 0 575 89 1 1123 631 246 13 40 chrX 70622456 70622608 -96027688 + RSINE1 SINE B4 18 165 0 1 1123 1600 172 3 19 chrX 70622680 70622994 -96027302 + Lx7 LINE L1 7388 7696 0 1 1123 374 289 50 0 chrX 70623095 70623219 -96027077 + B3A SINE B2 18 161 -55 1 1123 348 83 0 0 chrX 70623219 70623267 -96027029 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1123 317 307 146 0 chrX 70623267 70623279 -96027017 + B3 SINE B2 162 173 -43 1 1123 875 130 36 0 chrX 70623685 70623823 -96026473 + B1_Mur4 SINE Alu 1 143 -7 1 1123 1055 127 6 0 chrX 70623828 70624001 -96026295 + (GAAA)n Simple_repeat Simple_repeat 4 177 0 1 1123 746 199 12 0 chrX 70624007 70624178 -96026118 + GA-rich Low_complexity Low_complexity 1 173 0 1 1123 1152 46 0 0 chrX 70624578 70624729 -96025567 + B2_Mm2 SINE B2 1 151 -44 1 1123 482 228 9 9 chrX 70624787 70624902 -96025394 - RMER19B LTR ERVK -614 288 174 1 1123 3120 148 38 7 chrX 70624925 70625485 -96024811 + RLTR17 LTR ERVK 98 669 -23 1 1123 855 118 0 0 chrX 70625485 70625620 -96024676 + (TC)n Simple_repeat Simple_repeat 2 136 0 1 1123 3120 148 38 7 chrX 70625620 70625636 -96024660 + RLTR17 LTR ERVK 670 691 -1 1 1123 660 194 51 133 chrX 70625636 70625831 -96024465 - RMER19B LTR ERVK -723 179 1 1 1123 754 186 30 182 chrX 70625850 70625975 -96024321 - MT2A LTR ERVL -279 254 134 1 1123 1350 100 5 5 chrX 70625975 70626166 -96024130 + B2_Mm2 SINE B2 1 191 -4 1 1123 754 186 30 182 chrX 70626166 70626336 -96023960 - MT2A LTR ERVL -400 133 4 1 1123 429 103 0 0 chrX 70627035 70627103 -96023193 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 1123 412 230 58 29 chrX 70627143 70627246 -96023050 - B4 SINE B4 -72 220 115 1 1123 1984 134 31 68 chrX 70627246 70627630 -96022666 - ORR1C1 LTR MaLR 0 378 9 1 1123 419 87 8 65 chrX 70627667 70627790 -96022506 + (TA)n Simple_repeat Simple_repeat 2 117 0 1 1123 423 183 0 0 chrX 70627792 70627863 -96022433 - B4 SINE B4 -220 72 2 1 1123 1195 35 14 0 chrX 70627895 70628038 -96022258 + B1_Mus1 SINE Alu 2 146 -2 1 1123 2094 157 39 3 chrX 70628328 70628691 -96021605 - ORR1C1 LTR MaLR -2 376 1 1 1123 506 282 31 98 chrX 70631136 70631423 -96018873 + L1MB7 LINE L1 5902 6169 -15 1 1123 958 251 78 40 chrX 70631853 70631868 -96018428 - L1M2 LINE L1 -490 5822 5809 1 1123 330 0 0 0 chrX 70631868 70631911 -96018385 - L1_Mus2 LINE L1 -1 6565 6523 1 1123 1113 235 80 14 chrX 70631911 70632269 -96018027 - L1M2 LINE L1 -504 5808 5435 1 1123 3050 230 53 13 chrX 70632266 70633417 -96016879 + Lx4B LINE L1 4761 5971 -1087 1 1123 6387 58 55 4 chrX 70633408 70634853 -96015443 + L1VL2 LINE L1 308 1826 -1789 1 1123 296 226 0 0 chrX 70635019 70635081 -96015215 - PB1D10 SINE Alu -14 103 42 1 1123 22 0 0 0 chrX 70635774 70635796 -96014500 + AT_rich Low_complexity Low_complexity 1 22 0 1 1123 1220 40 7 0 chrX 70635806 70635954 -96014342 + B1_Mur4 SINE Alu 1 149 -1 1 1123 1466 124 163 0 chrX 70636357 70636609 -96013687 + Lx4B LINE L1 5946 6239 -819 1 1123 4551 131 146 1 chrX 70636609 70637397 -96012899 + RMER19B LTR ERVK 1 902 0 1 1123 407 303 60 15 chrX 70640153 70640274 -96010022 + B3A SINE B2 50 177 -21 1 1123 195 42 0 0 chrX 70640274 70640298 -96009998 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1123 407 303 60 15 chrX 70640298 70640310 -96009986 + B3A SINE B2 178 189 -9 1 1123 180 0 0 0 chrX 70641588 70641608 -96008688 + (TGG)n Simple_repeat Simple_repeat 2 21 0 1 1123 209 164 18 18 chrX 70642024 70642080 -96008216 + (CAG)n Simple_repeat Simple_repeat 3 58 0 1 1123 384 316 11 11 chrX 70643875 70644051 -96006245 - MamGyp-int LTR Gypsy -4781 281 106 1 1123 374 279 158 29 chrX 70644269 70644686 -96005610 - L1MEf LINE L1 -2667 3479 3009 1 1123 1916 61 4 8 chrX 70645192 70645440 -96004856 + L1_Mus2 LINE L1 6319 6565 -1 1 1123 44 56 0 0 chrX 70645534 70645606 -96004690 + AT_rich Low_complexity Low_complexity 1 72 0 1 1123 233 254 48 0 chrX 70645640 70645703 -96004593 - PB1 SINE Alu -53 74 9 1 1123 578 301 17 0 chrX 70647469 70647645 -96002651 + ID_B1 SINE B4 46 224 0 1 1124 249 258 15 15 chrX 70648043 70648110 -96002186 - ID_B1 SINE B4 -74 150 84 1 1124 255 267 17 0 chrX 70648051 70648111 -96002185 - PB1 SINE Alu -65 62 2 1 1124 366 330 42 33 chrX 70648116 70648233 -96002063 - L1MEf LINE L1 -5047 1195 1077 1 1124 998 52 19 13 chrX 70648233 70648388 -96001908 + (TTTC)n Simple_repeat Simple_repeat 1 156 0 1 1124 366 330 42 33 chrX 70648388 70648483 -96001813 - L1MEf LINE L1 -5166 1076 981 1 1124 419 321 0 7 chrX 70648570 70648711 -96001585 - B1F SINE Alu -9 140 1 1 1124 1482 75 0 10 chrX 70648771 70648973 -96001323 + L1_Mus2 LINE L1 6367 6566 0 1 1124 279 56 0 0 chrX 70649360 70649396 -96000900 - U2 snRNA snRNA -152 36 1 1 1124 1205 270 103 29 chrX 70649400 70650029 -96000267 - L1_Mur3 LINE L1 -13 5867 5173 1 1124 1490 160 126 3 chrX 70651235 70651568 -95998728 - ORR1D1 LTR MaLR 0 374 1 1 1124 6138 197 81 27 chrX 70651568 70652868 -95997428 - ORR1D1-int LTR MaLR 0 1370 1 1 1124 1580 174 92 0 chrX 70652877 70653194 -95997102 - ORR1D1 LTR MaLR -13 361 16 1 1124 466 276 0 52 chrX 70653276 70653410 -95996886 - B1F1 SINE Alu -20 129 3 1 1124 1231 237 95 32 chrX 70653472 70653793 -95996503 + ORR1D2 LTR MaLR 1 348 -22 1 1124 1903 175 67 17 chrX 70653793 70654153 -95996143 - ORR1C1 LTR MaLR 0 378 1 1 1124 1231 237 95 32 chrX 70654153 70654179 -95996117 + ORR1D2 LTR MaLR 349 370 0 1 1124 3284 33 5 18 chrX 70654219 70654620 -95995676 + MTA_Mm LTR MaLR 1 396 0 1 1124 395 302 28 0 chrX 70654665 70654771 -95995525 + RSINE1 SINE B4 2 110 -55 1 1124 230 265 72 0 chrX 70654767 70654850 -95995446 + MLT1F1 LTR MaLR 49 137 -432 1 1124 257 327 66 24 chrX 70655202 70655368 -95994928 - MLT1D LTR MaLR -309 196 24 1 1124 319 301 38 28 chrX 70657685 70657791 -95992505 - L2a LINE L2 -304 3122 3016 1 1124 450 53 0 0 chrX 70658525 70658582 -95991714 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 1124 423 341 60 72 chrX 70658933 70659198 -95991098 - B4 SINE B4 -23 269 8 2 1124 1195 193 5 5 chrX 70659554 70659762 -95990534 + B3 SINE B2 2 209 -7 2 1124 303 236 228 12 chrX 70659787 70659954 -95990342 - L1MB5 LINE L1 -39 6135 5933 2 1124 4653 106 82 11 chrX 70660134 70660947 -95989349 - RMER17D LTR ERVK -14 875 5 2 1124 955 228 75 72 chrX 70661170 70661519 -95988777 - L1MB5 LINE L1 -246 5928 5579 2 1124 589 329 35 82 chrX 70661608 70661863 -95988433 - B4A SINE B4 0 292 50 2 1124 322 222 99 11 chrX 70661928 70661986 -95988310 - B4 SINE B4 -12 280 220 2 1124 324 0 0 0 chrX 70661986 70662022 -95988274 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2 1124 322 196 945 5 chrX 70662022 70662093 -95988203 - B4 SINE B4 -73 219 80 2 1124 354 262 118 73 chrX 70662109 70662245 -95988051 - B3 SINE B2 -25 191 50 2 1124 249 292 27 40 chrX 70662213 70662288 -95988008 - B4A SINE B4 -210 82 9 2 1124 279 0 0 0 chrX 70662654 70662685 -95987611 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1124 23 33 0 0 chrX 70662697 70662727 -95987569 + AT_rich Low_complexity Low_complexity 1 30 0 2 1124 471 300 6 74 chrX 70662729 70662891 -95987405 + MTEa LTR MaLR 167 317 -62 2 1124 1153 59 0 0 chrX 70662907 70663059 -95987237 + L1Md_A LINE L1 6431 6582 0 2 1124 21 57 0 0 chrX 70663612 70663647 -95986649 + AT_rich Low_complexity Low_complexity 1 35 0 2 1124 297 0 0 0 chrX 70663653 70663686 -95986610 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1124 511 151 212 15 chrX 70663725 70663879 -95986417 + B2_Mm2 SINE B2 3 184 -9 2 1124 723 214 28 0 chrX 70663885 70664030 -95986266 - B3A SINE B2 -48 150 2 2 1124 426 20 0 0 chrX 70664993 70665044 -95985252 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1124 385 279 15 15 chrX 70665481 70665612 -95984684 + MurSatRep1 Unknown Unknown 592 722 -1415 2 1124 306 231 0 0 chrX 70669244 70669309 -95980987 + ID4_ SINE ID 3 67 -16 2 1124 690 72 0 0 chrX 70669399 70669496 -95980800 + (CA)n Simple_repeat Simple_repeat 1 97 0 2 1124 444 67 0 0 chrX 70669880 70669940 -95980356 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 1124 195 42 0 0 chrX 70671352 70671376 -95978920 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 1124 455 219 33 6 chrX 70671624 70671739 -95978557 - PB1D10 SINE Alu -1 126 3 2 1124 338 266 186 0 chrX 70671739 70671775 -95978521 - B4 SINE B4 -202 90 34 2 1124 596 271 228 19 chrX 70671966 70672453 -95977843 - L1ME1 LINE L1 -46 6118 5476 2 1124 234 0 0 0 chrX 70672453 70672479 -95977817 + (TCTG)n Simple_repeat Simple_repeat 1 26 0 2 1124 596 239 200 4 chrX 70672479 70672634 -95977662 - L1ME1 LINE L1 -709 5475 5296 2 1124 21 36 0 0 chrX 70672698 70672726 -95977570 + AT_rich Low_complexity Low_complexity 1 28 0 2 1124 1084 278 96 16 chrX 70673574 70673950 -95976346 + MLT2D LTR ERVL 7 412 -2 2 1124 335 250 16 0 chrX 70674211 70674275 -95976021 + PB1D10 SINE Alu 4 68 -49 2 1124 723 316 44 43 chrX 70674273 70674618 -95975678 + MLT1C LTR MaLR 78 389 -1 2 1124 513 269 70 14 chrX 70674647 70674790 -95975506 + RSINE1 SINE B4 15 165 0 2 1124 1157 78 0 0 chrX 70675099 70675241 -95975055 + B1_Mus1 SINE Alu 1 142 -6 2 1124 216 97 0 0 chrX 70675261 70675292 -95975004 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2 1124 887 273 31 22 chrX 70675342 70675567 -95974729 + B4A SINE B4 9 235 -57 2 1124 369 0 0 0 chrX 70675874 70675915 -95974381 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1124 297 135 0 0 chrX 70675925 70675977 -95974319 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 1124 954 264 98 18 chrX 70676003 70676339 -95973957 + MLT1A0 LTR MaLR 1 363 -2 2 1124 833 273 51 23 chrX 70676362 70676576 -95973720 - ID_B1 SINE B4 -4 220 1 2 1124 344 338 44 53 chrX 70676904 70677132 -95973164 - L1M4 LINE L1 -513 5671 5446 2 1124 533 254 0 0 chrX 70677193 70677307 -95972989 + ID_B1 SINE B4 105 218 -6 2 1124 569 320 69 68 chrX 70677305 70677803 -95972493 + MER63C DNA AcHobo 87 675 -255 2 1124 894 182 174 20 chrX 70681561 70681757 -95968539 - URR1A DNA MER1_type 0 226 1 2 1124 962 101 0 0 chrX 70683358 70683496 -95966800 - URR1B DNA MER1_type 0 225 88 2 1124 256 171 0 0 chrX 70683496 70683537 -95966759 - URR1A DNA MER1_type -185 41 1 2 1124 510 230 23 10 chrX 70683660 70683824 -95966472 - B3 SINE B2 0 216 20 2 1124 24 0 0 0 chrX 70685560 70685584 -95964712 + AT_rich Low_complexity Low_complexity 1 24 0 2 1124 480 181 0 41 chrX 70685798 70685896 -95964400 + PB1D10 SINE Alu 24 117 0 2 1124 1084 109 11 0 chrX 70685900 70686075 -95964221 + (GA)n Simple_repeat Simple_repeat 2 178 0 2 1124 231 167 0 0 chrX 70686079 70686121 -95964175 + A-rich Low_complexity Low_complexity 2 43 0 2 1124 330 267 108 10 chrX 70686245 70686347 -95963949 + L1M4c LINE L1 460 571 -5971 2 1124 284 311 85 50 chrX 70686445 70686726 -95963570 + L1M4c LINE L1 1575 1865 -4781 2 1124 1315 249 94 3 chrX 70686750 70687113 -95963183 + Lx8 LINE L1 6858 7253 -220 2 1124 859 216 88 0 chrX 70687116 70687310 -95962986 + Lx6 LINE L1 7248 7458 -2 2 1124 265 292 0 92 chrX 70687311 70687409 -95962887 + Lx8 LINE L1 7239 7327 -146 2 1124 338 312 53 89 chrX 70687617 70687704 -95962592 + B4 SINE B4 5 85 -207 2 1124 406 323 0 0 chrX 70687704 70687800 -95962496 + B1_Mur2 SINE Alu 1 96 -53 2 1124 370 315 115 58 chrX 70687807 70688033 -95962263 + L1M4c LINE L1 2228 2466 -4180 2 1124 785 239 188 17 chrX 70688051 70688412 -95961884 + L1MB7 LINE L1 5617 6039 -145 2 1124 222 118 0 0 chrX 70688421 70688455 -95961841 + (TTTC)n Simple_repeat Simple_repeat 1 34 0 2 1124 704 168 0 32 chrX 70688455 70688578 -95961718 - PB1D9 SINE Alu -1 119 1 2 1124 1120 140 54 107 chrX 70688623 70688847 -95961449 + B3 SINE B2 5 216 0 2 1124 437 172 67 45 chrX 70688855 70688989 -95961307 + L1MB7 LINE L1 6047 6183 -1 2 1124 402 74 0 0 chrX 70689126 70689180 -95961116 + (GA)n Simple_repeat Simple_repeat 2 55 0 2 1124 477 320 115 25 chrX 70689180 70689744 -95960552 + L1M4c LINE L1 5313 5928 -743 2 1124 250 356 0 25 chrX 70689834 70689943 -95960353 + L1M4c LINE L1 6123 6231 -507 2 1124 503 280 20 59 chrX 70689943 70690095 -95960201 + B1F SINE Alu 3 148 -1 2 1124 250 356 0 25 chrX 70690095 70690106 -95960190 + L1M4c LINE L1 6232 6240 -498 2 1124 1348 202 104 12 chrX 70690190 70690542 -95959754 + MTD LTR MaLR 1 406 -13 2 1124 228 318 0 0 chrX 70690581 70690647 -95959649 + Cheshire DNA MER1_type 156 221 -2199 2 1124 456 252 18 18 chrX 70690640 70690749 -95959547 + PB1D7 SINE Alu 11 119 -1 2 1124 185 286 47 16 chrX 70691610 70691674 -95958622 + L3 LINE CR1 1053 1118 -3371 2 1124 1164 92 120 6 chrX 70692616 70692791 -95957505 + B2_Mm2 SINE B2 1 195 0 2 1124 950 51 0 0 chrX 70692810 70692927 -95957369 + B1_Mm SINE Alu 31 147 0 2 1124 300 172 0 0 chrX 70692927 70692985 -95957311 + GA-rich Low_complexity Low_complexity 1 58 0 2 1124 306 325 231 18 chrX 70695639 70696028 -95954268 + L2 LINE L2 2606 3077 -342 2 1124 547 287 3 140 chrX 70696126 70696203 -95954093 - L1MB8 LINE L1 -50 6128 6056 2 1124 939 223 48 5 chrX 70696203 70696410 -95953886 - B3 SINE B2 0 216 1 2 1124 547 287 3 140 chrX 70696410 70696697 -95953599 - L1MB8 LINE L1 -123 6055 5814 2 1124 363 316 53 11 chrX 70696762 70696951 -95953345 - L1MB8 LINE L1 -594 5580 5384 2 1124 312 342 18 108 chrX 70697015 70697076 -95953220 + L1MDa LINE L1 655 706 -5841 2 1124 1269 41 0 0 chrX 70697076 70697222 -95953074 + B1_Mus1 SINE Alu 2 147 -1 2 1124 927 78 21 0 chrX 70697224 70697366 -95952930 + (GGAGA)n Simple_repeat Simple_repeat 3 147 0 2 1124 312 342 18 108 chrX 70697366 70697468 -95952828 + L1MDa LINE L1 707 806 -5741 2 1124 405 291 76 0 chrX 70697650 70697861 -95952435 + L1MDa LINE L1 1064 1289 -5258 2 1124 250 279 52 35 chrX 70697973 70698088 -95952208 + L1MC1 LINE L1 6217 6333 0 2 1124 207 0 0 0 chrX 70698266 70698289 -95952007 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2 1124 229 312 126 17 chrX 70699108 70699316 -95950980 + L2b LINE L2 2864 3101 -274 2 1124 288 200 186 12 chrX 70699397 70699483 -95950813 + L2a LINE L2 3289 3389 -37 2 1124 256 209 15 15 chrX 70700360 70700428 -95949868 + L1MB5 LINE L1 6100 6167 -7 2 1124 360 0 0 0 chrX 70700483 70700523 -95949773 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 1124 432 0 0 0 chrX 70700523 70700570 -95949726 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1124 849 134 7 15 chrX 70700980 70701116 -95949180 - B1_Mur2 SINE Alu -1 148 14 2 1124 2130 94 26 7 chrX 70701179 70701489 -95948807 + RMER6A LTR ERVK 1 316 -440 2 1124 356 160 0 118 chrX 70701472 70701499 -95948797 + B4 SINE B4 71 87 -205 2 1124 482 34 0 0 chrX 70701499 70701558 -95948738 + B1_Mus1 SINE Alu 4 62 -86 2 1124 951 169 0 0 chrX 70701585 70701762 -95948534 + GA-rich Low_complexity Low_complexity 2 178 0 2 1124 531 0 0 0 chrX 70701760 70701819 -95948477 + (TAG)n Simple_repeat Simple_repeat 2 60 0 2 1124 2038 144 28 30 chrX 70701820 70702213 -95948083 + RMER6A LTR ERVK 283 674 -82 2 1124 771 124 0 0 chrX 70702411 70702524 -95947772 + RMER6A LTR ERVK 644 756 0 2 1124 295 266 21 105 chrX 70704799 70704881 -95945415 + MIRb SINE MIR 40 99 -169 2 1124 500 244 25 50 chrX 70704881 70705002 -95945294 - PB1D7 SINE Alu 0 120 3 2 1124 395 309 45 41 chrX 70705002 70705160 -95945136 + MIR SINE MIR 88 247 -21 2 1124 1121 68 0 58 chrX 70705265 70705421 -95944875 + B1_Mus2 SINE Alu 1 147 0 2 1124 273 204 0 18 chrX 70705437 70705492 -95944804 + B4A SINE B4 191 244 -48 2 1124 933 218 14 73 chrX 70705470 70705688 -95944608 + B3 SINE B2 11 215 -1 2 1124 273 57 0 0 chrX 70705772 70705807 -95944489 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1124 3009 49 7 79 chrX 70706628 70707048 -95943248 - RLTR10 LTR ERVK 0 390 1 2 1124 15570 31 2 42 chrX 70707048 70709074 -95941222 - RLTR10-int LTR ERVK -1 1986 40 2 1124 3009 49 7 79 chrX 70709083 70709503 -95940793 - RLTR10 LTR ERVK 0 390 1 2 1124 203 325 157 15 chrX 70709566 70709763 -95940533 + L3 LINE CR1 4264 4488 -1 2 1124 185 313 91 63 chrX 70709959 70710102 -95940194 - L2b LINE L2 -123 3252 3106 2 1124 673 213 0 38 chrX 70710403 70710535 -95939761 + B1_Mur4 SINE Alu 12 138 -12 2 1124 552 65 0 0 chrX 70710535 70710612 -95939684 + (GA)n Simple_repeat Simple_repeat 2 78 0 2 1124 218 321 100 61 chrX 70712236 70712465 -95937831 + L2a LINE L2 2942 3179 -247 2 1124 201 39 0 0 chrX 70713610 70713636 -95936660 + (TGG)n Simple_repeat Simple_repeat 1 26 0 2 1124 210 37 0 0 chrX 70714132 70714159 -95936137 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 3 1124 204 143 0 23 chrX 70717616 70717659 -95932637 + (CTGGGG)n Simple_repeat Simple_repeat 1 42 0 3 1124 1525 183 170 11 chrX 70718281 70718634 -95931662 + MTD LTR MaLR 11 419 0 3 1124 575 290 104 27 chrX 70718634 70718734 -95931562 - MTEa LTR MaLR -180 199 84 3 1124 426 20 0 0 chrX 70718734 70718785 -95931511 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1124 575 290 104 27 chrX 70718785 70718865 -95931431 - MTEa LTR MaLR -296 83 2 3 1124 260 226 16 0 chrX 70719569 70719631 -95930665 - MLT1B LTR MaLR -5 385 323 3 1124 193 274 20 0 chrX 70721290 70721341 -95928955 - MIR SINE MIR -120 142 91 3 1124 1094 149 49 40 chrX 70721554 70721778 -95928518 + RLTR28 LTR ERVL 299 524 0 3 1124 723 33 0 0 chrX 70725037 70725127 -95925169 + (TC)n Simple_repeat Simple_repeat 1 90 0 3 1124 249 33 0 0 chrX 70725929 70725959 -95924337 + (CTG)n Simple_repeat Simple_repeat 2 31 0 3 1124 1049 146 172 0 chrX 70726593 70726785 -95923511 + URR1B DNA MER1_type 1 225 0 3 1124 634 295 10 15 chrX 70726994 70727165 -95923131 + ID_B1 SINE B4 84 252 -40 3 1124 257 273 13 0 chrX 70727423 70727500 -95922796 - L1MB7 LINE L1 -244 5940 5863 3 1124 533 236 0 0 chrX 70727520 70727626 -95922670 + ID_B1 SINE B4 104 209 -15 3 1124 465 66 0 0 chrX 70727630 70727691 -95922605 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 1124 423 296 0 26 chrX 70728825 70728981 -95921315 + CT-rich Low_complexity Low_complexity 2 153 0 3 1124 630 0 0 0 chrX 70733582 70733652 -95916644 + (TA)n Simple_repeat Simple_repeat 2 71 0 3 1124 270 81 0 0 chrX 70734625 70734662 -95915634 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1124 459 0 0 0 chrX 70735879 70735930 -95914366 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1124 504 0 0 0 chrX 70735930 70735985 -95914311 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1124 474 101 0 0 chrX 70735985 70736054 -95914242 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 1124 470 61 15 0 chrX 70738976 70739042 -95911254 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 3 1124 2290 39 13 25 chrX 70739197 70739515 -95910781 - L1Md_F3 LINE L1 0 6584 6271 3 1124 288 175 19 37 chrX 70740697 70740804 -95909492 + (TCTCTG)n Simple_repeat Simple_repeat 4 108 0 3 1124 450 0 0 0 chrX 70740808 70740858 -95909438 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1124 677 230 65 45 chrX 70742820 70743020 -95907276 + B3 SINE B2 3 206 -10 3 1124 363 60 0 0 chrX 70743020 70743070 -95907226 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1124 432 250 46 0 chrX 70743146 70743254 -95907042 + PB1D10 SINE Alu 1 113 -4 3 1124 304 325 8 16 chrX 70743663 70743791 -95906505 + (CATA)n Simple_repeat Simple_repeat 4 130 0 3 1124 204 317 28 21 chrX 70743860 70744002 -95906294 + (CATA)n Simple_repeat Simple_repeat 2 144 0 3 1124 307 314 81 102 chrX 70744725 70744961 -95905335 - MLT1D LTR MaLR -171 296 60 3 1124 318 50 0 0 chrX 70746098 70746138 -95904158 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1124 522 0 0 0 chrX 70746138 70746195 -95904101 + (GA)n Simple_repeat Simple_repeat 1 58 0 3 1124 231 347 24 0 chrX 70746687 70746857 -95903439 + (TG)n Simple_repeat Simple_repeat 2 175 0 3 1124 510 17 0 0 chrX 70748227 70748286 -95902010 + (CTG)n Simple_repeat Simple_repeat 2 60 0 3 1124 244 113 0 54 chrX 70748286 70748313 -95901983 + polypyrimidine Low_complexity Low_complexity 27 53 0 3 1124 621 0 0 0 chrX 70748313 70748382 -95901914 + (CCA)n Simple_repeat Simple_repeat 1 69 0 3 1124 244 113 0 54 chrX 70748382 70748410 -95901886 + polypyrimidine Low_complexity Low_complexity 1 26 0 3 1124 195 42 0 0 chrX 70748458 70748482 -95901814 + (CCG)n Simple_repeat Simple_repeat 1 24 0 3 1124 217 253 40 13 chrX 70748687 70748763 -95901533 + (CGGG)n Simple_repeat Simple_repeat 2 79 0 3 1124 442 291 34 28 chrX 70751386 70751587 -95898709 - MIR SINE MIR 0 262 69 3 1124 707 225 21 111 chrX 70752441 70752475 -95897821 - B3 SINE B2 0 216 181 3 1124 252 0 0 0 chrX 70752475 70752503 -95897793 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1124 707 225 21 111 chrX 70752503 70752703 -95897593 - B3 SINE B2 -36 180 3 3 1124 866 121 7 0 chrX 70753929 70754070 -95896226 - B1_Mus1 SINE Alu -1 147 6 3 1124 23 54 0 0 chrX 70754085 70754122 -95896174 + AT_rich Low_complexity Low_complexity 1 37 0 3 1124 981 149 92 58 chrX 70755145 70755352 -95894944 - B3 SINE B2 -2 214 1 3 1124 338 256 118 16 chrX 70755511 70755638 -95894658 - B1F SINE Alu -7 142 3 3 1124 526 297 71 20 chrX 70755663 70755859 -95894437 - MER58A DNA MER1_type -2 222 17 3 1124 218 340 45 14 chrX 70759256 70759438 -95890858 + MIR SINE MIR 46 233 -35 3 1124 603 333 95 47 chrX 70759754 70760113 -95890183 - MLT1J LTR MaLR -37 475 100 3 1124 425 267 20 33 chrX 70760267 70760418 -95889878 - B1F SINE Alu 0 149 1 3 1124 1199 262 143 24 chrX 70760988 70761485 -95888811 - L1MB3 LINE L1 -83 6100 5545 3 1124 710 83 33 0 chrX 70763663 70763783 -95886513 + (GA)n Simple_repeat Simple_repeat 1 124 0 3 1124 246 32 0 0 chrX 70764044 70764075 -95886221 + (TC)n Simple_repeat Simple_repeat 1 31 0 3 1124 265 196 0 0 chrX 70766579 70766625 -95883671 + L2a LINE L2 3375 3420 -6 3 1124 1003 270 24 44 chrX 70769161 70769459 -95880837 + B4A SINE B4 1 292 0 3 1124 205 152 0 0 chrX 70770163 70770196 -95880100 + (CACG)n Simple_repeat Simple_repeat 3 35 0 3 1124 273 119 0 0 chrX 70773839 70773881 -95876415 + (CAG)n Simple_repeat Simple_repeat 3 44 0 3 1124 988 130 0 0 chrX 70776033 70776171 -95874125 + B1_Mur3 SINE Alu 1 138 -11 3 1124 828 0 0 0 chrX 70776171 70776263 -95874033 + (GAAA)n Simple_repeat Simple_repeat 2 93 0 3 1124 396 0 0 0 chrX 70777036 70777080 -95873216 + (CATA)n Simple_repeat Simple_repeat 4 47 0 3 1124 824 112 33 7 chrX 70777086 70777239 -95873057 - Lx2 LINE L1 -10 6987 6831 3 1124 397 243 236 0 chrX 70778074 70778218 -95872078 + B3A SINE B2 5 182 -16 3 1124 324 0 0 0 chrX 70778231 70778267 -95872029 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 1125 873 54 0 0 chrX 70779270 70779381 -95870915 + (TG)n Simple_repeat Simple_repeat 1 111 0 3 1125 240 154 93 37 chrX 70779670 70779724 -95870572 - MIR SINE MIR -119 143 87 3 1125 317 279 12 60 chrX 70782568 70782652 -95867644 + ID SINE ID 4 83 -141 3 1125 223 310 40 89 chrX 70782652 70782687 -95867609 + BC1_Mm scRNA scRNA 7 119 -33 3 1125 624 261 37 25 chrX 70782687 70782768 -95867528 + B4 SINE B4 3 81 -211 3 1125 1227 63 7 10 chrX 70782768 70783061 -95867235 + (GAAA)n Simple_repeat Simple_repeat 1 292 0 3 1125 624 261 37 25 chrX 70783061 70783137 -95867159 + B4 SINE B4 82 162 -130 3 1125 274 247 132 22 chrX 70783074 70783165 -95867131 + PB1D10 SINE Alu 17 117 0 3 1125 370 319 9 9 chrX 70783857 70783971 -95866325 + PB1 SINE Alu 1 114 -13 3 1125 467 216 106 18 chrX 70784021 70784134 -95866162 + B1_Mus1 SINE Alu 1 123 -25 3 1125 324 0 0 0 chrX 70784410 70784446 -95865850 + (TC)n Simple_repeat Simple_repeat 2 37 0 3 1125 468 0 0 0 chrX 70784446 70784497 -95865799 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1125 637 227 23 15 chrX 70784497 70784627 -95865669 - RSINE1 SINE B4 -25 140 10 3 1125 1113 303 11 7 chrX 70784612 70784891 -95865405 - MTE-int LTR MaLR -1188 392 113 3 1125 243 226 0 0 chrX 70784902 70784955 -95865341 - L1M4 LINE L1 -694 5468 5416 3 1125 629 288 104 16 chrX 70785036 70785287 -95865009 + B4A SINE B4 2 274 -18 3 1125 366 80 0 0 chrX 70785320 70785370 -95864926 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1125 236 268 0 0 chrX 70785399 70785455 -95864841 + L1M4 LINE L1 5593 5648 -530 3 1125 256 356 26 9 chrX 70785504 70785620 -95864676 + MTE-int LTR MaLR 1 118 -1462 3 1125 363 275 210 21 chrX 70785621 70785807 -95864489 - L1M4 LINE L1 -832 5314 5094 3 1125 934 238 57 0 chrX 70785840 70786033 -95864263 - B3 SINE B2 -12 204 1 3 1125 843 211 54 89 chrX 70786036 70786260 -95864036 - B3 SINE B2 0 216 1 3 1125 639 245 44 25 chrX 70786288 70786447 -95863849 - RSINE1 SINE B4 -2 163 2 3 1125 378 259 0 122 chrX 70786449 70786527 -95863769 - PB1D10 SINE Alu 0 117 50 3 1125 1462 69 16 5 chrX 70786527 70786716 -95863580 - B2_Mm2 SINE B2 -4 191 1 3 1125 378 259 0 122 chrX 70786716 70786760 -95863536 - PB1D10 SINE Alu -68 49 10 3 1125 268 255 0 0 chrX 70786879 70786930 -95863366 - MLT1C LTR MaLR -17 488 438 3 1125 720 259 112 67 chrX 70786906 70787175 -95863121 + B4 SINE B4 12 292 0 3 1125 485 344 63 35 chrX 70787174 70787460 -95862836 - MLT1C LTR MaLR -54 413 120 3 1125 423 0 0 0 chrX 70789336 70789383 -95860913 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 1125 193 154 115 0 chrX 70789750 70789802 -95860494 + L2a LINE L2 3333 3390 -36 3 1125 210 37 0 0 chrX 70790081 70790108 -95860188 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 3 1125 3146 55 8 5 chrX 70790928 70791315 -95858981 + L1Md_F2 LINE L1 6183 6570 -12 3 1125 1320 70 53 11 chrX 70791322 70791509 -95858787 + B2_Mm2 SINE B2 1 195 0 3 1125 535 290 55 51 chrX 70793259 70793532 -95856764 - L1MB7 LINE L1 -16 6168 5895 3 1125 584 283 65 7 chrX 70793565 70793704 -95856592 - RSINE1 SINE B4 -17 148 2 3 1125 491 296 150 0 chrX 70793706 70793959 -95856337 - L1MB7 LINE L1 -277 5907 5617 3 1125 188 67 0 32 chrX 70793978 70794009 -95856287 + (TTTC)n Simple_repeat Simple_repeat 4 33 0 3 1125 183 203 0 0 chrX 70794029 70794088 -95856208 + (TTG)n Simple_repeat Simple_repeat 2 60 0 3 1125 198 0 0 0 chrX 70794091 70794113 -95856183 + (GTTTG)n Simple_repeat Simple_repeat 2 23 0 3 1125 422 278 0 11 chrX 70794150 70794241 -95856055 + RSINE1 SINE B4 40 129 -36 3 1125 771 178 0 0 chrX 70794240 70794358 -95855938 - B1_Mur4 SINE Alu -32 118 1 4 1125 245 347 42 0 chrX 70794567 70794639 -95855657 - B4 SINE B4 -2 290 216 4 1125 324 103 0 0 chrX 70794639 70794697 -95855599 + (TTTG)n Simple_repeat Simple_repeat 4 61 0 4 1125 761 332 9 14 chrX 70794697 70794920 -95855376 - B4 SINE B4 -69 223 2 4 1125 587 247 65 0 chrX 70794952 70795149 -95855147 - L1MB5 LINE L1 -18 6162 5955 4 1125 5081 49 2 2 chrX 70795241 70795855 -95854441 - L1_Mus2 LINE L1 -1 6565 5952 4 1125 300 302 125 8 chrX 70797465 70797585 -95852711 - MER74A LTR ERVL -202 356 223 4 1125 267 179 15 15 chrX 70798580 70798648 -95851648 + L1M2 LINE L1 5128 5195 -948 4 1125 324 282 32 8 chrX 70798753 70798878 -95851418 + L1MC LINE L1 2832 2959 -3187 4 1125 645 276 137 42 chrX 70799075 70799381 -95850915 - MLT1A LTR MaLR -1 373 39 4 1125 268 325 39 0 chrX 70800090 70800167 -95850129 - MER77 LTR ERVL -213 394 315 4 1125 233 167 37 0 chrX 70806567 70806621 -95843675 + T-rich Low_complexity Low_complexity 3 58 0 4 1125 288 77 0 0 chrX 70807088 70807127 -95843169 + (CCTG)n Simple_repeat Simple_repeat 1 39 0 4 1125 228 174 0 21 chrX 70810136 70810183 -95840113 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1125 201 289 143 38 chrX 70810699 70810832 -95839464 - L2a LINE L2 -4 3422 3276 4 1125 181 333 21 0 chrX 70810873 70810966 -95839330 - L2a LINE L2 -315 3111 3017 4 1125 341 252 36 80 chrX 70811766 70811878 -95838418 + PB1D7 SINE Alu 1 107 -13 4 1125 276 30 0 0 chrX 70811879 70811912 -95838384 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 4 1125 285 0 0 0 chrX 70813444 70813487 -95836809 - L1Md_T LINE L1 0 6582 6540 4 1125 641 292 30 20 chrX 70813751 70813950 -95836346 - MER58A DNA MER1_type -12 212 12 4 1125 549 0 0 0 chrX 70815020 70815081 -95835215 + (TATATG)n Simple_repeat Simple_repeat 4 64 0 4 1125 191 114 0 28 chrX 70815478 70815514 -95834782 + (TCTCC)n Simple_repeat Simple_repeat 1 35 0 4 1125 417 103 0 0 chrX 70815916 70815984 -95834312 + (CA)n Simple_repeat Simple_repeat 2 69 0 4 1125 198 0 0 0 chrX 70816147 70816169 -95834127 + (GGGA)n Simple_repeat Simple_repeat 1 22 0 4 1125 207 294 0 0 chrX 70816469 70816520 -95833776 + (TATATG)n Simple_repeat Simple_repeat 1 51 0 4 1125 1116 255 62 42 chrX 70818885 70819319 -95830977 - L1MB2 LINE L1 -107 6064 5622 4 1125 468 0 0 0 chrX 70819346 70819398 -95830898 + (TC)n Simple_repeat Simple_repeat 2 53 0 4 1125 675 250 146 1 chrX 70819703 70819888 -95830408 - B3A SINE B2 -2 214 8 4 1125 621 272 108 9 chrX 70820290 70820557 -95829739 - MLT1C LTR MaLR -52 415 114 4 1125 241 222 15 31 chrX 70821092 70821157 -95829139 - MIR3 SINE MIR -43 165 102 4 1125 432 181 0 0 chrX 70821600 70821683 -95828613 + G-rich Low_complexity Low_complexity 2 84 0 4 1125 282 246 31 0 chrX 70822540 70822605 -95827691 + L2b LINE L2 3302 3368 -7 4 1125 1555 149 4 37 chrX 70823679 70823950 -95826346 - MTC LTR MaLR -2 419 158 4 1125 335 287 92 35 chrX 70824106 70824138 -95826158 - B1F1 SINE Alu 0 149 122 4 1125 845 158 7 58 chrX 70824138 70824293 -95826003 - B1_Mus1 SINE Alu 0 148 2 4 1125 335 287 92 35 chrX 70824293 70824401 -95825895 - B1F1 SINE Alu -28 121 1 4 1125 267 354 8 30 chrX 70824961 70825095 -95825201 + L1MD2 LINE L1 6013 6143 -216 4 1125 360 0 0 0 chrX 70825131 70825171 -95825125 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 1125 726 271 16 11 chrX 70826155 70826345 -95823951 + Lx8 LINE L1 6354 6544 -929 4 1125 349 39 0 0 chrX 70826345 70826396 -95823900 + L1Md_F2 LINE L1 6521 6571 -11 4 1125 2081 249 50 14 chrX 70826404 70826978 -95823318 + Lx8 LINE L1 6515 7109 -364 4 1125 897 177 7 0 chrX 70827334 70827481 -95822815 + B1_Mur2 SINE Alu 2 149 0 4 1125 334 308 18 45 chrX 70827781 70827814 -95822482 - L1MEg LINE L1 -4134 2968 2934 4 1125 1215 54 0 0 chrX 70827814 70827961 -95822335 - B1_Mus2 SINE Alu 0 147 1 4 1125 334 237 19 93 chrX 70827961 70828051 -95822245 - L1MEg LINE L1 -4169 2933 2861 4 1125 197 159 23 0 chrX 70829537 70829581 -95820715 + (CATGC)n Simple_repeat Simple_repeat 3 47 0 4 1125 238 188 0 0 chrX 70830349 70830397 -95819899 + L2b LINE L2 3328 3375 0 4 1125 479 331 23 30 chrX 70831266 70831556 -95818740 - MLT1D LTR MaLR -5 385 13 4 1125 185 178 22 0 chrX 70831956 70832001 -95818295 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1125 605 310 125 42 chrX 70832867 70833251 -95817045 + LTR52 LTR ERVL 1 416 -5 4 1125 267 103 0 0 chrX 70833582 70833621 -95816675 + (TCC)n Simple_repeat Simple_repeat 2 40 0 4 1125 358 273 231 16 chrX 70833799 70833985 -95816311 + L1MB7 LINE L1 5946 6171 -13 4 1125 183 42 0 0 chrX 70834000 70834024 -95816272 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1125 261 200 62 0 chrX 70834233 70834298 -95815998 + L1M4 LINE L1 4501 4569 -1577 4 1125 899 164 24 0 chrX 70834299 70834464 -95815832 - URR1B DNA MER1_type 0 225 57 4 1125 978 206 27 63 chrX 70834464 70834687 -95815609 + B4A SINE B4 31 245 -47 4 1125 875 259 53 5 chrX 70834679 70834869 -95815427 + B3 SINE B2 9 207 -9 4 1125 2990 150 61 89 chrX 70834915 70835501 -95814795 + RMER15 LTR ERVL 4 573 -2 4 1125 455 167 105 53 chrX 70835739 70835834 -95814462 + B1_Mur3 SINE Alu 50 149 0 4 1125 21 36 0 0 chrX 70835895 70835923 -95814373 + AT_rich Low_complexity Low_complexity 1 28 0 4 1125 2140 152 58 0 chrX 70835924 70836300 -95813996 - RMER1B Other Other -6 1060 663 4 1125 379 243 12 181 chrX 70836300 70836342 -95813954 - MT2B2 LTR ERVL -280 304 167 4 1125 774 86 24 64 chrX 70836342 70836467 -95813829 - B1_Mus1 SINE Alu -26 122 3 4 1125 1683 226 94 73 chrX 70836471 70837068 -95813228 - RMER1B Other Other -596 470 38 4 1125 389 149 30 0 chrX 70837089 70837156 -95813140 - B1_Mus2 SINE Alu -1 146 78 4 1125 488 179 242 0 chrX 70837351 70837446 -95812850 + B1_Mur2 SINE Alu 1 118 -31 4 1125 360 248 248 0 chrX 70837446 70837464 -95812832 + ID_B1 SINE B4 82 222 -2 4 1125 266 253 94 10 chrX 70837471 70837567 -95812729 + L1MD1 LINE L1 6128 6231 -11 4 1125 1972 172 319 2 chrX 70837876 70838290 -95812006 - RMER4B LTR ERVK -24 561 17 4 1125 1253 34 0 0 chrX 70838291 70838438 -95811858 + B1_Mus2 SINE Alu 1 147 0 4 1125 513 84 0 0 chrX 70838439 70838510 -95811786 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 4 1125 1202 74 0 0 chrX 70842102 70842250 -95808046 - B1_Mus1 SINE Alu 0 148 1 4 1125 446 322 0 52 chrX 70842390 70842412 -95807884 + ID_B1 SINE B4 73 93 -131 4 1125 1144 90 0 0 chrX 70842412 70842557 -95807739 + B1_Mus2 SINE Alu 1 145 -2 4 1125 446 322 0 52 chrX 70842557 70842688 -95807608 + ID_B1 SINE B4 94 218 -6 4 1125 259 207 43 86 chrX 70842826 70842902 -95807394 - ID_B1 SINE B4 -130 162 89 4 1125 1447 256 83 11 chrX 70843018 70843369 -95806927 - MTEa LTR MaLR -3 376 1 4 1125 279 180 0 16 chrX 70843775 70843837 -95806459 - L1M5 LINE L1 -1542 4604 4544 4 1125 473 285 64 21 chrX 70844129 70844362 -95805934 + L1MC4a LINE L1 6340 6582 -1300 4 1125 1044 207 20 29 chrX 70844362 70844444 -95805852 + B3 SINE B2 1 82 -134 4 1125 2406 96 9 33 chrX 70844444 70844497 -95805799 - ORR1A2 LTR MaLR 0 327 285 4 1125 1504 68 16 0 chrX 70844497 70844687 -95805609 - B2_Mm2 SINE B2 -1 194 2 4 1125 2406 96 9 33 chrX 70844687 70844968 -95805328 - ORR1A2 LTR MaLR -43 284 1 4 1125 1044 207 20 29 chrX 70844968 70845089 -95805207 + B3 SINE B2 83 202 -14 4 1125 264 170 189 11 chrX 70845109 70845204 -95805092 + L1MC4a LINE L1 6568 6679 -1203 4 1125 212 184 0 0 chrX 70845388 70845426 -95804870 + A-rich Low_complexity Low_complexity 1 38 0 4 1125 1157 200 5 0 chrX 70845434 70845634 -95804662 + B3 SINE B2 1 201 -15 4 1125 1123 264 43 52 chrX 70845638 70845966 -95804330 - ORR1E LTR MaLR -34 325 1 4 1125 383 208 20 0 chrX 70846069 70846170 -95804126 + L1MC4a LINE L1 7115 7217 -825 4 1125 501 264 120 7 chrX 70846187 70846381 -95803915 - L1M4 LINE L1 -610 5568 5352 4 1125 434 276 63 6 chrX 70846458 70846633 -95803663 - L1M4 LINE L1 -1017 5129 4945 4 1125 1198 172 25 0 chrX 70846634 70846838 -95803458 - RLTR17 LTR ERVK -312 380 172 4 1125 264 226 372 0 chrX 70846837 70846939 -95803357 + B1_Mur1 SINE Alu 10 149 0 4 1125 995 249 0 38 chrX 70846945 70847233 -95803063 - L1M4 LINE L1 -1898 4248 3972 4 1125 1056 105 0 0 chrX 70847263 70847406 -95802890 + B1_Mus1 SINE Alu 6 148 0 4 1125 240 59 0 0 chrX 70847406 70847440 -95802856 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1125 832 185 117 6 chrX 70847554 70847733 -95802563 - B3 SINE B2 -13 203 5 4 1125 21 0 0 0 chrX 70847736 70847757 -95802539 + AT_rich Low_complexity Low_complexity 1 21 0 4 1125 258 204 0 0 chrX 70847785 70847819 -95802477 - B1_Mur4 SINE Alu -3 147 114 4 1125 2833 159 88 16 chrX 70847819 70848363 -95801933 - RMER4B LTR ERVK -2 583 1 4 1125 632 186 26 0 chrX 70848363 70848465 -95801831 - B1_Mus2 SINE Alu -33 114 10 4 1125 1152 83 7 0 chrX 70848466 70848611 -95801685 + B1_Mus2 SINE Alu 2 147 0 4 1125 342 94 109 0 chrX 70848948 70849012 -95801284 - RMER4B LTR ERVK -304 281 211 4 1125 1241 223 67 20 chrX 70849077 70849374 -95800922 + MTEb LTR MaLR 67 377 -2 4 1125 408 191 54 33 chrX 70849724 70849816 -95800480 + B1_Mur2 SINE Alu 9 102 -47 4 1125 363 22 0 0 chrX 70849776 70849821 -95800475 - RMER17D LTR ERVK -844 45 1 4 1125 600 129 0 21 chrX 70849834 70849929 -95800367 + B1_Mur2 SINE Alu 56 148 -1 4 1125 272 244 535 59 chrX 70850044 70850240 -95800056 - MLT1J LTR MaLR 0 512 224 4 1125 354 258 34 0 chrX 70850342 70850431 -95799865 + ID_B1 SINE B4 129 220 -4 4 1125 896 143 42 21 chrX 70850483 70850626 -95799670 + B1_Mus1 SINE Alu 1 146 -2 4 1125 4205 203 44 43 chrX 70851250 70851557 -95798739 - RMER1C Other Other 0 1342 1027 4 1125 2320 94 28 0 chrX 70851557 70851875 -95798421 + ORR1A1 LTR MaLR 1 327 0 4 1125 10839 136 15 11 chrX 70851877 70853659 -95796637 + ORR1A1-int LTR MaLR 3 1792 0 4 1125 2392 139 0 0 chrX 70853659 70854005 -95796291 + ORR1A1 LTR MaLR 1 346 0 4 1125 4205 213 39 39 chrX 70854005 70854758 -95795538 - RMER1C Other Other -316 1026 213 4 1125 963 250 64 34 chrX 70855154 70855390 -95794906 + B4A SINE B4 1 243 -49 4 1125 21 36 0 0 chrX 70855530 70855558 -95794738 + AT_rich Low_complexity Low_complexity 1 28 0 5 1125 851 236 79 0 chrX 70855566 70855744 -95794552 + B3 SINE B2 1 192 -24 5 1125 369 0 0 0 chrX 70855744 70855785 -95794511 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1125 623 261 33 8 chrX 70855843 70855963 -95794333 - RSINE1 SINE B4 -24 141 19 5 1125 289 246 27 55 chrX 70855983 70856056 -95794240 - ID SINE ID -139 85 15 5 1125 558 206 0 10 chrX 70856080 70856178 -95794118 + B4A SINE B4 1 97 -195 5 1125 843 225 4 167 chrX 70856207 70856355 -95793941 + B3 SINE B2 1 134 -82 5 1125 1194 63 0 0 chrX 70856355 70856497 -95793799 - B1_Mus1 SINE Alu -6 142 1 5 1125 843 225 4 167 chrX 70856497 70856588 -95793708 + B3 SINE B2 135 201 -15 5 1125 483 351 7 7 chrX 70856618 70856770 -95793526 + RSINE1 SINE B4 4 155 -10 5 1125 653 229 23 8 chrX 70856800 70856932 -95793364 + B4A SINE B4 84 217 -75 5 1125 212 288 15 0 chrX 70856955 70857021 -95793275 + (CATATA)n Simple_repeat Simple_repeat 1 67 0 5 1125 855 119 63 0 chrX 70857179 70857305 -95792991 - B1_Mur4 SINE Alu -1 149 16 5 1125 302 290 89 103 chrX 70857180 70857326 -95792970 - B4A SINE B4 -68 224 81 5 1125 516 285 8 2 chrX 70857398 70857563 -95792733 + L1MD3 LINE L1 7832 7973 -22 5 1125 771 212 0 0 chrX 70857646 70857783 -95792513 + B1_Mus1 SINE Alu 11 147 -1 5 1125 695 289 33 15 chrX 70857800 70858074 -95792222 + L1MD LINE L1 5329 5607 -635 5 1125 280 321 10 7 chrX 70858086 70858199 -95792097 + ID4 SINE ID 8 121 -31 5 1125 498 200 174 0 chrX 70858405 70858520 -95791776 + B1F SINE Alu 15 149 0 5 1125 257 232 101 0 chrX 70858751 70858820 -95791476 - MIR3 SINE MIR -51 157 82 5 1125 192 40 0 0 chrX 70858890 70858915 -95791381 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 5 1125 652 279 103 26 chrX 70858940 70859279 -95791017 + HAL1 LINE L1 1765 2129 -378 5 1125 1007 258 5 0 chrX 70859944 70860142 -95790154 + B3 SINE B2 1 199 -17 5 1125 773 212 7 0 chrX 70860163 70860300 -95789996 + B1_Mur1 SINE Alu 4 141 -8 5 1125 273 367 92 29 chrX 70860381 70860555 -95789741 + MLT1C LTR MaLR 202 386 -81 5 1125 310 354 65 40 chrX 70862736 70862936 -95787360 + MLT1D LTR MaLR 23 227 -278 5 1125 258 273 65 0 chrX 70863264 70863341 -95786955 - MLT1F1 LTR MaLR -439 130 49 5 1125 436 294 29 0 chrX 70863337 70863439 -95786857 - RSINE1 SINE B4 -55 110 6 5 1125 394 88 14 14 chrX 70864403 70864472 -95785824 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 1125 262 233 75 43 chrX 70864760 70864854 -95785442 + Lx2B LINE L1 6904 7000 0 5 1125 231 36 0 0 chrX 70865247 70865275 -95785021 + (TCTG)n Simple_repeat Simple_repeat 3 30 0 5 1125 1197 117 0 23 chrX 70865686 70865700 -95784596 - B2_Mm2 SINE B2 -23 172 162 5 1125 333 0 0 0 chrX 70865700 70865737 -95784559 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 5 1125 1197 117 0 23 chrX 70865737 70865897 -95784399 - B2_Mm2 SINE B2 -34 161 2 5 1125 313 95 0 0 chrX 70865897 70865939 -95784357 - B3 SINE B2 -174 42 1 5 1125 261 0 0 0 chrX 70866013 70866042 -95784254 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1125 1060 122 0 0 chrX 70866042 70866181 -95784115 - B1_Mus1 SINE Alu -9 139 1 5 1125 291 299 46 0 chrX 70866182 70866269 -95784027 - B4 SINE B4 -197 95 5 5 1125 241 200 25 0 chrX 70866294 70866374 -95783922 + L1MD LINE L1 2574 2655 -3491 5 1125 3662 181 35 11 chrX 70866469 70867128 -95783168 - Lx5 LINE L1 0 7050 6376 5 1125 1651 184 56 43 chrX 70867165 70867234 -95783062 + Lx5 LINE L1 5959 6027 -1023 5 1125 546 16 0 0 chrX 70867234 70867297 -95782999 + (GGGA)n Simple_repeat Simple_repeat 2 64 0 5 1125 1651 184 56 43 chrX 70867297 70867641 -95782655 + Lx5 LINE L1 6028 6376 -674 5 1125 234 0 0 0 chrX 70867642 70867668 -95782628 + (TTA)n Simple_repeat Simple_repeat 2 27 0 5 1125 1010 137 0 20 chrX 70867668 70867817 -95782479 - B1_Mus1 SINE Alu -2 146 1 5 1125 297 178 175 17 chrX 70867817 70867937 -95782359 + L1MD LINE L1 2751 2889 -3257 5 1125 364 241 25 0 chrX 70867944 70868023 -95782273 + ID4 SINE ID 3 83 0 5 1125 2661 62 0 3 chrX 70868029 70868368 -95781928 + L1Md_F2 LINE L1 6243 6580 -2 5 1125 1781 173 110 127 chrX 70868386 70868659 -95781637 + MT2A LTR ERVL 7 272 -261 5 1125 1157 67 0 0 chrX 70868659 70868794 -95781502 + B1_Mm SINE Alu 1 135 -12 5 1125 180 0 0 0 chrX 70868797 70868817 -95781479 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5 1125 1781 173 110 127 chrX 70868817 70869075 -95781221 + MT2A LTR ERVL 273 526 -7 5 1125 23 33 0 0 chrX 70869278 70869308 -95780988 + AT_rich Low_complexity Low_complexity 1 30 0 5 1125 707 273 19 0 chrX 70869309 70869470 -95780826 + RSINE1 SINE B4 2 165 0 5 1125 1340 278 79 15 chrX 70869739 70870145 -95780151 - MLT1C LTR MaLR -5 462 31 5 1125 347 338 113 25 chrX 70871925 70872217 -95778079 - L2c LINE L2 -345 3042 2728 5 1125 241 297 54 21 chrX 70872290 70872383 -95777913 - L2c LINE L2 -929 2490 2395 5 1125 216 0 0 0 chrX 70873026 70873050 -95777246 + (GGGA)n Simple_repeat Simple_repeat 1 24 0 5 1125 430 283 75 0 chrX 70874060 70874180 -95776116 + ID_B1 SINE B4 96 224 0 5 1125 1890 243 85 29 chrX 70874193 70874774 -95775522 + Lx5 LINE L1 6456 7030 -20 5 1125 180 0 0 0 chrX 70874774 70874794 -95775502 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 5 1125 1890 247 100 38 chrX 70874794 70874817 -95775479 + Lx5 LINE L1 7031 7050 0 5 1125 396 0 0 0 chrX 70877812 70877856 -95772440 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1125 283 298 105 0 chrX 70880114 70880238 -95770058 + MIRc SINE MIR 121 257 -11 5 1125 1110 16 0 0 chrX 70881477 70881605 -95768691 + (TC)n Simple_repeat Simple_repeat 1 128 0 5 1125 369 0 0 0 chrX 70881605 70881645 -95768651 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1125 196 30 0 57 chrX 70882130 70882165 -95768131 + (GAGAA)n Simple_repeat Simple_repeat 2 34 0 5 1125 219 242 56 167 chrX 70882379 70882523 -95767773 - L2b LINE L2 0 3375 3248 5 1125 388 352 63 34 chrX 70883524 70883762 -95766534 - L1M5 LINE L1 -734 5506 5262 5 1125 182 65 65 0 chrX 70884696 70884727 -95765569 + (CCCCG)n Simple_repeat Simple_repeat 2 34 0 5 1125 233 201 0 159 chrX 70885854 70886055 -95764241 + (CGAAG)n Simple_repeat Simple_repeat 2 170 0 5 1125 275 250 40 30 chrX 70886327 70886426 -95763870 + MIRc SINE MIR 83 182 -86 5 1125 279 0 0 0 chrX 70888678 70888709 -95761587 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1125 234 316 13 38 chrX 70889790 70889869 -95760427 - MLT1A LTR MaLR -277 97 21 5 1125 458 292 0 70 chrX 70890161 70890290 -95760006 - ID_B1 SINE B4 -14 210 91 5 1125 317 154 4 27 chrX 70890304 70890365 -95759931 + MLT1D LTR MaLR 444 541 -7 5 1125 294 250 209 90 chrX 70890512 70890789 -95759507 - L1MCa LINE L1 -5789 719 410 5 1125 427 225 103 59 chrX 70891094 70891213 -95759083 + L1MEe LINE L1 1963 2096 -4070 5 1125 1599 22 38 0 chrX 70891213 70891398 -95758898 + B2_Mm1a SINE B2 1 192 -1 5 1125 427 241 88 80 chrX 70891398 70891517 -95758779 + L1MEe LINE L1 2097 2174 -3992 5 1125 451 240 81 88 chrX 70891517 70891677 -95758619 - RMER15 LTR ERVL -13 562 404 5 1125 631 259 112 20 chrX 70891742 70891939 -95758357 + B3 SINE B2 1 215 -1 5 1125 960 136 13 20 chrX 70891954 70892104 -95758192 + B1_Mur4 SINE Alu 2 150 0 5 1125 219 88 0 0 chrX 70892281 70892315 -95757981 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1125 1249 54 0 0 chrX 70892320 70892468 -95757828 + B1_Mus1 SINE Alu 1 148 0 5 1125 405 284 19 84 chrX 70892795 70892968 -95757328 - ORR1E LTR MaLR -193 166 1 5 1125 406 242 113 46 chrX 70892968 70893027 -95757269 + L1M4b LINE L1 2024 2079 -5255 5 1125 1224 107 26 26 chrX 70893027 70893219 -95757077 + B2_Mm2 SINE B2 2 193 -2 5 1125 406 253 107 48 chrX 70893219 70893383 -95756913 + L1M4b LINE L1 2080 2365 -4737 5 1125 469 259 0 0 chrX 70893401 70893486 -95756810 + ID SINE ID 1 85 -139 5 1125 291 284 86 0 chrX 70893526 70893607 -95756689 - B3A SINE B2 0 198 111 5 1125 3439 35 10 0 chrX 70893626 70894022 -95756274 + MTB LTR MaLR 1 400 0 5 1125 485 282 107 39 chrX 70894169 70894367 -95755929 - MLT1A LTR MaLR -157 217 5 5 1125 626 200 103 0 chrX 70894382 70894537 -95755759 + L1M4b LINE L1 5518 5688 -1318 5 1125 703 231 0 27 chrX 70894546 70894693 -95755603 + B1_Mur2 SINE Alu 1 143 -6 5 1125 23 33 0 0 chrX 70894695 70894725 -95755571 + AT_rich Low_complexity Low_complexity 1 30 0 5 1125 599 328 51 68 chrX 70894760 70895054 -95755242 + B4A SINE B4 4 292 0 5 1125 399 21 0 0 chrX 70895057 70895105 -95755191 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 1125 1288 199 86 7 chrX 70895152 70895430 -95754866 + RMER15 LTR ERVL 276 575 0 5 1125 369 270 22 0 chrX 70895462 70895551 -95754745 + L1M4b LINE L1 5795 5885 -1121 5 1125 1015 79 65 7 chrX 70895555 70895708 -95754588 + B2_Mm2 SINE B2 23 184 -11 5 1125 228 291 29 19 chrX 70895746 70895851 -95754445 + Lx8 LINE L1 7070 7175 -298 5 1125 449 295 119 11 chrX 70895913 70896098 -95754198 + RMER15 LTR ERVL 371 575 0 5 1125 309 265 29 0 chrX 70896102 70896170 -95754126 + L1M4b LINE L1 5897 5966 -1040 5 1125 1111 262 20 37 chrX 70896307 70896604 -95753692 + RMER15 LTR ERVL 270 561 -14 5 1125 449 223 81 86 chrX 70896614 70896958 -95753338 + L1M4b LINE L1 5961 6306 -732 5 1125 988 230 5 10 chrX 70897266 70897468 -95752828 - B3 SINE B2 -15 201 1 5 1125 1099 202 10 29 chrX 70897677 70897886 -95752410 + B3 SINE B2 5 209 -7 5 1125 22 0 0 0 chrX 70897886 70897908 -95752388 + AT_rich Low_complexity Low_complexity 1 22 0 5 1125 284 262 0 15 chrX 70898152 70898218 -95752078 + RSINE1 SINE B4 17 81 -84 5 1125 688 229 63 42 chrX 70899040 70899229 -95751067 - B3 SINE B2 -6 189 1 5 1125 1662 36 0 0 chrX 70899918 70900110 -95750186 + B2_Mm1a SINE B2 2 193 0 5 1125 1271 48 0 0 chrX 70900126 70900273 -95750023 + B1_Mus2 SINE Alu 1 147 0 5 1125 182 37 37 0 chrX 70903912 70903939 -95746357 + (CCCCCA)n Simple_repeat Simple_repeat 2 29 0 5 1125 307 248 56 6 chrX 70904266 70904428 -95745868 + (CA)n Simple_repeat Simple_repeat 2 171 0 6 1125 225 298 25 8 chrX 70905357 70905479 -95744817 + (CCG)n Simple_repeat Simple_repeat 3 126 0 6 1125 2521 139 32 0 chrX 70906905 70907280 -95743016 + MTC LTR MaLR 1 387 -34 6 1125 234 0 0 0 chrX 70907283 70907309 -95742987 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 1125 1205 68 12 6 chrX 70907311 70907475 -95742821 - B2_Mm2 SINE B2 -30 165 1 6 1125 282 159 0 0 chrX 70907478 70907522 -95742774 + MTC LTR MaLR 376 419 0 6 1125 1044 248 5 0 chrX 70907534 70907756 -95742540 - ID_B1 SINE B4 0 224 2 6 1125 432 247 11 0 chrX 70907815 70907904 -95742392 + PB1 SINE Alu 21 110 -17 6 1125 346 293 121 0 chrX 70907927 70908026 -95742270 + PB1D10 SINE Alu 1 111 -6 6 1125 1886 172 33 33 chrX 70908055 70908421 -95741875 - ORR1D1 LTR MaLR 0 374 9 6 1125 590 318 15 59 chrX 70908556 70908760 -95741536 + B3A SINE B2 4 198 0 6 1125 668 253 130 14 chrX 70908852 70909137 -95741159 + L1MC3 LINE L1 5255 5572 -772 6 1125 647 160 0 15 chrX 70909139 70909272 -95741024 + CT-rich Low_complexity Low_complexity 2 132 0 6 1125 848 186 7 7 chrX 70909321 70909467 -95740829 - B1_Mur4 SINE Alu -2 148 3 6 1125 1512 108 22 0 chrX 70909481 70909704 -95740592 - L1Md_F2 LINE L1 -1 6581 6354 6 1125 518 224 126 23 chrX 70909704 70909878 -95740418 + L1MC3 LINE L1 5581 5772 -572 6 140 236 191 126 35 chrX 70909947 70910034 -95740262 + MT2B LTR ERVL 159 253 -348 6 1126 359 240 13 0 chrX 70909978 70910053 -95740243 + ID_B1 SINE B4 122 197 -27 6 1126 600 307 87 9 chrX 70910076 70910421 -95739875 + L1MC3 LINE L1 5860 6231 -1554 6 1126 490 283 71 124 chrX 70910476 70910496 -95739800 + B4A SINE B4 78 97 -195 6 1126 1240 48 0 0 chrX 70910496 70910633 -95739663 + B1_Mus2 SINE Alu 2 138 -9 6 1126 228 35 0 0 chrX 70910633 70910662 -95739634 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 6 1126 490 283 71 124 chrX 70910670 70910806 -95739490 + B4A SINE B4 98 236 -56 6 1126 306 279 194 0 chrX 70910806 70910935 -95739361 + RSINE1 SINE B4 3 156 -9 6 1126 278 106 21 0 chrX 70910935 70910982 -95739314 + (TGAA)n Simple_repeat Simple_repeat 3 50 0 6 1126 490 283 71 124 chrX 70910982 70911028 -95739268 + B4A SINE B4 237 269 -23 6 1126 216 97 0 0 chrX 70911028 70911059 -95739237 + (CGTG)n Simple_repeat Simple_repeat 4 34 0 6 1126 490 283 71 124 chrX 70911059 70911079 -95739217 + B4A SINE B4 270 289 -3 6 1126 261 330 79 70 chrX 70911097 70911111 -95739185 + B4 SINE B4 70 183 -108 6 1126 462 255 0 50 chrX 70911111 70911210 -95739086 + B1_Mur2 SINE Alu 1 94 -55 6 1126 1155 82 0 7 chrX 70911276 70911423 -95738873 + B1_Mus1 SINE Alu 3 148 0 6 1126 257 0 30 0 chrX 70911425 70911458 -95738838 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 6 1126 579 236 295 0 chrX 70911490 70911778 -95738518 + L1MC3 LINE L1 6486 6858 -927 6 1126 227 270 48 0 chrX 70911817 70911880 -95738416 + ID4 SINE ID 3 68 -15 6 1126 537 185 178 16 chrX 70911899 70912035 -95738261 + B3 SINE B2 65 216 0 6 1126 648 237 115 28 chrX 70912042 70912224 -95738072 + MTE2b LTR MaLR 3 200 -179 6 1126 457 212 0 12 chrX 70912232 70912313 -95737983 + B1_Mur1 SINE Alu 68 147 -2 6 1126 192 149 0 0 chrX 70912364 70912411 -95737885 + (T)n Simple_repeat Simple_repeat 1 47 0 6 1126 1159 42 28 0 chrX 70912413 70912555 -95737741 - B1_Mm SINE Alu 0 147 2 6 1126 752 211 0 0 chrX 70912555 70912683 -95737613 + B1_Mur2 SINE Alu 14 141 -8 6 1126 265 333 77 18 chrX 70912807 70912975 -95737321 + ORR1E LTR MaLR 8 185 -174 6 1126 422 259 164 14 chrX 70913226 70913445 -95736851 + L1MC3 LINE L1 7411 7662 -123 6 1126 2542 109 0 5 chrX 70913454 70913850 -95736446 - L1_Mm LINE L1 -1708 4175 3782 6 1126 3053 160 13 15 chrX 70913850 70914383 -95735913 + Lx LINE L1 6123 6654 0 6 1126 247 217 17 0 chrX 70914398 70914458 -95735838 + L1MD3 LINE L1 7905 7965 -30 6 1126 491 270 45 0 chrX 70914484 70914595 -95735701 + ID_B1 SINE B4 101 216 -8 6 1126 289 217 143 14 chrX 70914616 70914686 -95735610 + PB1D10 SINE Alu 1 79 -38 6 1126 2410 91 28 0 chrX 70915694 70916012 -95734284 - ORR1A2 LTR MaLR 0 327 1 6 1126 1197 62 0 0 chrX 70916683 70916829 -95733467 - B1_Mus2 SINE Alu 0 147 2 6 1126 411 21 0 0 chrX 70917195 70917243 -95733053 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1126 432 0 0 0 chrX 70917243 70917291 -95733005 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 1126 205 232 36 0 chrX 70918369 70918447 -95731849 + GA-rich Low_complexity Low_complexity 1 80 0 6 1126 25 75 0 0 chrX 70918826 70918879 -95731417 + GC_rich Low_complexity Low_complexity 1 53 0 6 1126 259 270 17 39 chrX 70918938 70919119 -95731177 + C-rich Low_complexity Low_complexity 1 177 0 6 1126 193 146 42 0 chrX 70919860 70919908 -95730388 + CT-rich Low_complexity Low_complexity 2 51 0 6 1126 210 140 98 20 chrX 70920109 70920160 -95730136 - MIR SINE MIR -71 137 83 6 1126 215 217 217 0 chrX 70921408 70921468 -95728828 - MIR SINE MIR -102 160 88 6 1126 417 86 0 0 chrX 70923342 70923400 -95726896 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 6 1126 182 118 29 0 chrX 70924320 70924354 -95725942 + (CCCTG)n Simple_repeat Simple_repeat 1 35 0 6 1126 345 47 0 0 chrX 70927030 70927073 -95723223 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1126 282 284 0 0 chrX 70928099 70928166 -95722130 + ID_B1 SINE B4 81 147 -77 6 1126 389 291 236 10 chrX 70928364 70928572 -95721724 - L2 LINE L2 -841 2578 2324 6 1126 358 255 39 10 chrX 70928786 70928889 -95721407 + B1F1 SINE Alu 1 106 -43 6 1126 244 338 29 0 chrX 70928923 70928991 -95721305 + ID4_ SINE ID 11 80 -3 6 1126 464 321 18 97 chrX 70928933 70929150 -95721146 + ID_B1 SINE B4 23 222 -2 6 1126 286 309 0 0 chrX 70929148 70929216 -95721080 + ID4 SINE ID 2 69 -14 6 1126 301 239 205 49 chrX 70929223 70929450 -95720846 + L1MB4 LINE L1 5727 5990 -190 6 1126 198 0 0 0 chrX 70929836 70929858 -95720438 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1126 1156 50 14 0 chrX 70929862 70930001 -95720295 - B1_Mm SINE Alu -6 141 1 6 1126 803 302 70 16 chrX 70932127 70932383 -95717913 + B4 SINE B4 20 289 -3 6 1126 473 244 17 25 chrX 70932727 70932845 -95717451 - PB1D10 SINE Alu 0 117 1 6 1126 198 0 0 0 chrX 70934609 70934631 -95715665 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 6 1126 235 300 0 41 chrX 70935420 70935473 -95714823 - MIR SINE MIR -77 185 135 6 1126 190 56 56 0 chrX 70935473 70935509 -95714787 + (CAA)n Simple_repeat Simple_repeat 2 39 0 6 1126 235 333 57 70 chrX 70935509 70935611 -95714685 - MIR SINE MIR -127 141 35 6 1126 1234 54 0 0 chrX 70938623 70938770 -95711526 + B1_Mus2 SINE Alu 1 147 0 6 1126 1369 92 38 0 chrX 70938789 70938974 -95711322 + B2_Mm2 SINE B2 2 193 -2 6 1126 652 154 192 16 chrX 70939135 70939260 -95711036 + B1_Mus1 SINE Alu 2 148 0 6 1126 213 39 0 0 chrX 70940586 70940612 -95709684 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1126 271 241 24 136 chrX 70940921 70940943 -95709353 + MT2B LTR ERVL 147 154 -447 6 1126 861 162 0 20 chrX 70940943 70941094 -95709202 + B1_Mus1 SINE Alu 1 148 0 6 1126 947 80 72 7 chrX 70941097 70941235 -95709061 + B1_Mus2 SINE Alu 1 147 0 6 1126 285 312 0 0 chrX 70941431 70941511 -95708785 - B1F SINE Alu -55 94 15 6 1126 252 303 16 48 chrX 70941511 70941543 -95708753 - ID_B1 SINE B4 -41 162 75 6 1126 2560 83 3 3 chrX 70941569 70941896 -95708400 + ORR1A2 LTR MaLR 1 327 0 6 1126 1306 20 0 0 chrX 70942138 70942284 -95708012 + B1_Mm SINE Alu 2 147 0 6 1126 183 80 0 0 chrX 70942284 70942309 -95707987 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1126 643 219 0 26 chrX 70942319 70942436 -95707860 + PB1D9 SINE Alu 2 115 -5 6 1126 767 266 91 23 chrX 70942451 70942716 -95707580 + B4A SINE B4 2 284 -8 6 1126 1180 81 0 0 chrX 70943237 70943376 -95706920 + B1_Mus1 SINE Alu 1 139 -9 6 1126 194 0 0 37 chrX 70943376 70943403 -95706893 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 1126 363 309 16 31 chrX 70943526 70943653 -95706643 - MIR SINE MIR -61 147 23 6 1126 693 107 0 0 chrX 70943915 70944018 -95706278 + B1_Mm SINE Alu 2 104 -43 6 1126 559 261 6 62 chrX 70944006 70944182 -95706114 + B4A SINE B4 56 221 -71 6 1126 914 76 130 0 chrX 70944192 70944323 -95705973 + B1_Mus1 SINE Alu 1 148 0 6 1126 228 272 11 37 chrX 70944464 70944531 -95705765 + B1F1 SINE Alu 8 75 -42 6 1126 517 223 46 25 chrX 70944558 70944698 -95705598 + B1_Mur1 SINE Alu 9 149 0 6 1126 1215 41 0 7 chrX 70944702 70944848 -95705448 + B1_Mus2 SINE Alu 2 146 -1 6 1126 180 125 0 0 chrX 70944850 70944882 -95705414 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 6 1126 1153 52 0 0 chrX 70945196 70945332 -95704964 - B1_Mus1 SINE Alu -12 136 1 6 1126 576 0 0 0 chrX 70945475 70945539 -95704757 + (TG)n Simple_repeat Simple_repeat 2 65 0 6 1126 617 255 101 50 chrX 70945561 70945780 -95704516 - B4A SINE B4 -19 273 44 6 1126 3125 111 10 26 chrX 70946246 70946848 -95703448 - L1_Mus2 LINE L1 -7 6560 5885 6 1126 988 72 0 0 chrX 70947234 70947372 -95702924 + B1_Mus2 SINE Alu 10 147 0 6 1126 246 152 0 0 chrX 70947372 70947431 -95702865 + A-rich Low_complexity Low_complexity 2 60 0 6 1126 232 135 0 0 chrX 70947465 70947502 -95702794 + ID4_ SINE ID 44 80 -3 6 1126 21 0 0 0 chrX 70947821 70947842 -95702454 + AT_rich Low_complexity Low_complexity 1 21 0 6 1126 239 158 0 0 chrX 70948129 70948167 -95702129 + B3 SINE B2 3 40 -176 6 1126 1083 74 62 0 chrX 70948168 70948330 -95701966 + B2_Mm2 SINE B2 1 172 -23 6 1126 616 60 0 20 chrX 70948377 70948479 -95701817 + B2_Mm1a SINE B2 91 190 -3 7 1126 255 313 0 0 chrX 70948516 70948583 -95701713 + B2_Mm2 SINE B2 37 103 -92 7 1126 324 0 0 0 chrX 70948639 70948675 -95701621 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 7 1126 592 228 0 61 chrX 70948675 70948806 -95701490 + B1_Mur2 SINE Alu 7 129 -20 7 1126 423 262 31 47 chrX 70948822 70948950 -95701346 - B3 SINE B2 -75 141 16 7 1126 285 301 0 21 chrX 70950091 70950186 -95700110 + PB1D10 SINE Alu 17 109 -8 7 1126 651 250 165 21 chrX 70950193 70950381 -95699915 + B3 SINE B2 2 216 0 7 1126 416 176 0 13 chrX 70950411 70950486 -95699810 + ID4_ SINE ID 9 82 -1 7 1126 243 61 0 0 chrX 70950512 70950545 -95699751 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1126 213 39 0 0 chrX 70950670 70950696 -95699600 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 1126 575 291 111 35 chrX 70950964 70951256 -95699040 + MLT1A1 LTR MaLR 26 350 -58 7 1126 316 294 0 0 chrX 70951338 70951406 -95698890 - ID4 SINE ID -13 70 3 7 1126 693 229 14 14 chrX 70951906 70952038 -95698258 + B1_Mur2 SINE Alu 2 133 -16 7 1126 333 0 0 0 chrX 70952038 70952075 -95698221 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 7 1126 693 229 14 14 chrX 70952075 70952088 -95698208 + B1_Mur2 SINE Alu 134 146 -3 7 1126 679 264 0 0 chrX 70952929 70953073 -95697223 + RSINE1 SINE B4 3 146 -19 7 1126 709 202 16 0 chrX 70953567 70953691 -95696605 + B1_Mur1 SINE Alu 12 137 -12 7 1126 1043 50 42 14 chrX 70953757 70953899 -95696397 + B1_Mus2 SINE Alu 1 146 -1 7 1126 238 330 104 0 chrX 70953921 70954027 -95696269 + PB1D10 SINE Alu 1 117 0 7 1126 258 284 70 28 chrX 70954887 70954994 -95695302 - B4 SINE B4 -22 270 78 7 1126 314 310 113 28 chrX 70954988 70955130 -95695166 - B4A SINE B4 -145 147 1 7 1126 1117 83 0 0 chrX 70955405 70955549 -95694747 + B1_Mus1 SINE Alu 5 148 0 7 1126 504 154 22 0 chrX 70956113 70956204 -95694092 - B1_Mur2 SINE Alu 0 149 57 7 1126 247 341 37 105 chrX 70956190 70956207 -95694089 + B4A SINE B4 78 142 -150 7 1126 808 166 14 14 chrX 70956207 70956354 -95693942 + B1_Mur4 SINE Alu 4 150 0 7 1126 247 341 37 105 chrX 70956354 70956380 -95693916 + B4A SINE B4 143 254 -38 7 1126 1048 68 0 76 chrX 70956658 70956816 -95693480 + B1_Mus2 SINE Alu 2 147 0 7 1126 228 135 0 0 chrX 70956816 70956853 -95693443 + (A)n Simple_repeat Simple_repeat 1 37 0 7 1126 314 284 0 128 chrX 70956922 70957000 -95693296 + PB1D10 SINE Alu 3 66 -51 7 1126 933 112 37 0 chrX 70957000 70957134 -95693162 + B1_Mus1 SINE Alu 5 143 -5 7 1126 314 284 0 128 chrX 70957134 70957180 -95693116 + PB1D10 SINE Alu 67 111 -6 7 1126 252 0 0 0 chrX 70957180 70957208 -95693088 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 7 1126 687 169 38 15 chrX 70957266 70957398 -95692898 + B1_Mur3 SINE Alu 15 149 0 7 1126 459 202 26 60 chrX 70958188 70958304 -95691992 - PB1D9 SINE Alu -8 112 1 7 1126 267 264 95 42 chrX 70958474 70958569 -95691727 + PB1D9 SINE Alu 2 101 -19 7 1126 1220 21 14 0 chrX 70958682 70958827 -95691469 - B1_Mus2 SINE Alu 0 147 1 7 1126 643 299 112 30 chrX 70958897 70959166 -95691130 - B4A SINE B4 0 292 2 7 1126 483 254 27 0 chrX 70959166 70959276 -95691020 - ID_B1 SINE B4 -2 222 110 7 1126 1135 62 14 0 chrX 70959508 70959652 -95690644 - B1_Mus2 SINE Alu 0 147 2 7 1126 444 148 125 0 chrX 70965098 70965186 -95685110 + B1F SINE Alu 43 141 -8 7 1126 643 248 27 7 chrX 70965192 70965338 -95684958 + B1F2 SINE Alu 1 149 0 7 1126 273 231 11 170 chrX 70965386 70965480 -95684816 + ID4_ SINE ID 2 80 -3 7 1126 417 167 33 22 chrX 70967171 70967263 -95683033 - PB1D10 SINE Alu -1 116 24 7 1126 219 36 0 0 chrX 70967372 70967400 -95682896 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 7 1126 1129 76 0 0 chrX 70967400 70967536 -95682760 - B1_Mus2 SINE Alu -9 138 3 7 1126 675 154 0 8 chrX 70967577 70967695 -95682601 - B3 SINE B2 -1 215 99 7 1126 1081 185 198 75 chrX 70967724 70967793 -95682503 - ORR1D1 LTR MaLR 0 374 314 7 1126 750 115 128 23 chrX 70967793 70967926 -95682370 + B1_Mm SINE Alu 1 147 0 7 1126 1081 185 198 75 chrX 70967926 70968189 -95682107 - ORR1D1 LTR MaLR -61 313 1 7 1126 264 30 0 0 chrX 70968876 70968909 -95681387 + (TCCA)n Simple_repeat Simple_repeat 1 33 0 7 1126 985 128 7 13 chrX 70969277 70969427 -95680869 - B1_Mur4 SINE Alu 0 150 2 7 1126 774 182 20 20 chrX 70969701 70969847 -95680449 + B1_Mm SINE Alu 1 146 -1 7 1126 1110 84 0 0 chrX 70970089 70970231 -95680065 + B1_Mus1 SINE Alu 2 143 -5 7 1126 189 107 0 0 chrX 70970231 70970259 -95680037 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 7 1126 670 294 31 0 chrX 70970290 70970453 -95679843 - B3A SINE B2 -26 172 5 7 1126 1584 57 0 5 chrX 70970457 70970652 -95679644 - B2_Mm2 SINE B2 0 195 2 7 1126 1492 231 30 20 chrX 70970674 70971119 -95679177 - L1MB7 LINE L1 -17 6167 5708 7 1126 360 133 0 0 chrX 70971169 70971229 -95679067 + (TCC)n Simple_repeat Simple_repeat 3 62 0 7 1126 1034 110 7 0 chrX 70971233 70971379 -95678917 - B1_Mus2 SINE Alu 0 147 1 7 1126 1233 222 78 12 chrX 70971479 70971798 -95678498 - L1MA4 LINE L1 -382 5918 5579 7 1126 672 207 89 0 chrX 70971836 70971971 -95678325 - B1_Mus1 SINE Alu 0 148 2 7 1126 269 146 0 35 chrX 70971976 70972033 -95678263 - B1_Mur1 SINE Alu 0 149 95 7 1126 226 281 16 0 chrX 70972055 70972119 -95678177 - L1_Mur3 LINE L1 -465 5415 5351 7 1126 370 248 56 49 chrX 70972154 70972299 -95677997 - RSINE1 SINE B4 0 165 17 7 1126 1451 69 11 0 chrX 70972366 70972555 -95677741 - B2_Mm1t SINE B2 -2 191 1 7 1126 441 223 223 0 chrX 70972558 70972679 -95677617 - B1_Mur3 SINE Alu 0 149 2 7 1126 587 211 9 0 chrX 70972689 70972803 -95677493 - ID_B1 SINE B4 -2 222 108 7 1126 355 110 298 121 chrX 70972801 70972925 -95677371 - B2_Mm2 SINE B2 -3 192 47 7 1126 774 88 219 0 chrX 70972961 70973098 -95677198 - B2_Mm1t SINE B2 -26 167 1 7 1126 957 300 78 13 chrX 70973212 70973597 -95676699 - L1M4 LINE L1 -396 5782 5373 7 1126 643 267 0 0 chrX 70973616 70973751 -95676545 - RSINE1 SINE B4 -26 139 5 7 1126 318 276 12 0 chrX 70973779 70973875 -95676421 - PB1D7 SINE Alu -1 119 20 7 1126 423 56 0 0 chrX 70973890 70973944 -95676352 + (CATA)n Simple_repeat Simple_repeat 3 56 0 7 1126 251 285 62 55 chrX 70974011 70974156 -95676140 - L1M4 LINE L1 -912 5234 5089 7 1126 1191 61 0 0 chrX 70974979 70975126 -95675170 + B1_Mus1 SINE Alu 2 148 0 7 1126 401 215 38 0 chrX 70975209 70975288 -95675008 + ID4_ SINE ID 2 83 0 7 1126 422 233 70 0 chrX 70975302 70975388 -95674908 + ID_B1 SINE B4 3 94 -130 7 1126 26 30 0 0 chrX 70975415 70975448 -95674848 + AT_rich Low_complexity Low_complexity 1 33 0 7 1126 1317 91 11 0 chrX 70975448 70975623 -95674673 + B2_Mm1t SINE B2 2 178 -15 7 1126 183 80 0 0 chrX 70975623 70975648 -95674648 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 7 1126 286 298 163 16 chrX 70975664 70975787 -95674509 + B1F SINE Alu 9 149 0 7 1126 906 163 0 0 chrX 70976634 70976775 -95673521 + B1_Mur4 SINE Alu 10 150 0 7 1126 655 276 81 28 chrX 70977412 70977695 -95672601 - MLT1C LTR MaLR -80 387 90 7 1126 380 266 21 0 chrX 70978531 70978625 -95671671 + PB1D10 SINE Alu 5 100 -17 7 1126 1182 42 21 0 chrX 70978691 70978835 -95671461 - B1_Mus2 SINE Alu 0 147 1 7 1126 916 139 0 18 chrX 70978850 70979019 -95671277 + CT-rich Low_complexity Low_complexity 4 169 0 7 1126 868 213 58 54 chrX 70979024 70979247 -95671049 - ID_B1 SINE B4 0 224 1 7 1126 1425 86 16 0 chrX 70980773 70980960 -95669336 - B2_Mm2 SINE B2 -5 190 1 7 1126 1139 49 21 0 chrX 70981002 70981145 -95669151 - B1_Mm SINE Alu 0 147 2 7 1126 590 288 87 81 chrX 70981609 70981956 -95668340 - MLT1B LTR MaLR -29 361 13 7 1126 776 197 27 27 chrX 70983917 70984063 -95666233 + B1_Mur2 SINE Alu 1 146 -3 7 1126 1050 180 152 87 chrX 70984518 70984828 -95665468 - RLTR41 LTR ERV1 -26 420 91 7 1126 1436 70 27 0 chrX 70984872 70985058 -95665238 - B2_Mm1a SINE B2 -1 192 2 7 1126 1106 48 6 76 chrX 70985618 70985775 -95664521 - B1_Mus2 SINE Alu 0 147 2 7 1126 1243 264 24 37 chrX 70985923 70986297 -95663999 + L1MB5 LINE L1 5762 6130 -44 7 1126 668 248 0 0 chrX 70986425 70986574 -95663722 + B1F SINE Alu 1 149 0 7 1126 185 65 32 0 chrX 70986651 70986682 -95663614 + (TAGA)n Simple_repeat Simple_repeat 3 34 0 7 1126 1896 119 13 19 chrX 70986687 70987005 -95663291 - ORR1A4 LTR MaLR -8 321 6 7 1126 1168 42 14 14 chrX 70987165 70987310 -95662986 - B1_Mus2 SINE Alu -1 146 2 7 1126 896 72 8 0 chrX 70987348 70987473 -95662823 + (GGAAA)n Simple_repeat Simple_repeat 4 129 0 7 1126 450 94 0 0 chrX 70987473 70987537 -95662759 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 7 1126 1096 76 6 6 chrX 70987540 70987698 -95662598 + B2_Mm1a SINE B2 1 158 -35 7 1126 477 0 0 0 chrX 70987698 70987751 -95662545 + (TAAA)n Simple_repeat Simple_repeat 1 53 0 7 1126 1090 108 0 6 chrX 70987751 70987769 -95662527 + B2_Mm2 SINE B2 158 175 -20 7 1126 408 156 260 62 chrX 70987775 70987871 -95662425 + PB1D9 SINE Alu 35 149 0 7 1126 298 225 62 0 chrX 70987912 70987992 -95662304 + L1MA9 LINE L1 5819 5903 -397 7 1126 1105 50 43 0 chrX 70988020 70988161 -95662135 + B1_Mus2 SINE Alu 1 147 0 8 1126 294 235 28 90 chrX 70988234 70988368 -95661928 - Lx7 LINE L1 -19 7677 7547 8 1126 1346 92 11 5 chrX 70988368 70988554 -95661742 + B2_Mm2 SINE B2 2 188 -7 8 1126 294 235 28 90 chrX 70988554 70988597 -95661699 - Lx7 LINE L1 -150 7546 7511 8 1126 839 299 66 13 chrX 70988607 70988912 -95661384 - Lx7 LINE L1 -363 7333 7013 8 1126 1042 72 50 0 chrX 70989180 70989319 -95660977 + B1_Mm SINE Alu 2 147 0 8 1126 1179 75 0 0 chrX 70989591 70989738 -95660558 + B1_Mus1 SINE Alu 1 147 -1 8 1126 1013 100 6 17 chrX 70989950 70990123 -95660173 + (GAA)n Simple_repeat Simple_repeat 1 171 0 8 1126 2162 151 94 21 chrX 70990177 70990643 -95659653 - RLTR18 LTR ERVK -116 500 1 8 1126 337 260 0 28 chrX 70990650 70990740 -95659556 + ID_B1 SINE B4 77 153 -71 8 1126 380 221 48 41 chrX 70990839 70990976 -95659320 + L1MA9 LINE L1 5937 6072 -219 7 1126 231 197 48 145 chrX 70991030 70991113 -95659183 + B3A SINE B2 108 182 -16 8 1126 903 160 192 6 chrX 70991146 70991328 -95658968 + B3 SINE B2 1 216 0 8 1126 1141 64 0 0 chrX 70991353 70991509 -95658787 + B2_Mm2 SINE B2 1 156 -39 8 1126 216 97 0 0 chrX 70991509 70991540 -95658756 + (TAAG)n Simple_repeat Simple_repeat 1 31 0 8 1126 789 196 0 20 chrX 70991544 70991690 -95658606 + B1_Mur3 SINE Alu 1 143 -6 8 1126 312 120 0 0 chrX 70991692 70991742 -95658554 + (CATA)n Simple_repeat Simple_repeat 2 51 0 8 1126 1209 55 0 7 chrX 70991772 70991919 -95658377 + B1_Mus2 SINE Alu 1 146 -1 8 1126 212 245 106 58 chrX 70992353 70992457 -95657839 + RSINE1 SINE B4 57 165 0 8 1126 457 280 68 8 chrX 70992497 70992630 -95657666 + B3 SINE B2 44 184 -32 8 1126 1240 54 0 0 chrX 70992669 70992816 -95657480 + B1_Mus2 SINE Alu 1 147 0 8 1126 229 67 0 0 chrX 70992827 70992857 -95657439 + B1_Mur2 SINE Alu 97 126 -23 8 1126 423 0 0 0 chrX 70993246 70993293 -95657003 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 1126 509 152 18 71 chrX 70993329 70993442 -95656854 + PB1D9 SINE Alu 1 107 -13 8 1126 231 146 0 0 chrX 70993444 70993485 -95656811 + (TTTTC)n Simple_repeat Simple_repeat 2 42 0 8 1126 962 83 105 0 chrX 70993485 70993618 -95656678 - B1_Mus1 SINE Alu 0 148 2 8 1126 205 93 47 0 chrX 70993634 70993649 -95656647 + (TAAAAA)n Simple_repeat Simple_repeat 2 16 0 8 1126 1671 32 0 0 chrX 70993649 70993839 -95656457 + B2_Mm1a SINE B2 2 191 -2 8 1126 205 93 47 0 chrX 70993839 70993866 -95656430 + (TAAAAA)n Simple_repeat Simple_repeat 5 32 0 8 1126 546 276 42 101 chrX 70994067 70994425 -95655871 + L1M4 LINE L1 4619 4955 -1191 8 1126 599 211 209 12 chrX 70994427 70994590 -95655706 + B3A SINE B2 2 196 -2 8 1126 1094 70 21 0 chrX 70994591 70994734 -95655562 + B1_Mus2 SINE Alu 1 146 -1 8 1126 1163 61 0 26 chrX 70994758 70994910 -95655386 - B1_Mus1 SINE Alu 0 148 1 8 1126 306 217 0 0 chrX 70994910 70994970 -95655326 - B3 SINE B2 -155 61 2 8 1126 454 139 25 0 chrX 70995170 70995249 -95655047 + MTD LTR MaLR 10 90 -331 8 1126 231 36 0 0 chrX 70995252 70995280 -95655016 + (TGGGGG)n Simple_repeat Simple_repeat 3 30 0 8 1126 1111 45 39 7 chrX 70995280 70995435 -95654861 + B2_Mm2 SINE B2 2 161 -34 8 1126 270 0 0 0 chrX 70995435 70995465 -95654831 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 8 1126 1217 54 0 0 chrX 70995513 70995661 -95654635 - B1_Mus1 SINE Alu 0 148 1 8 1126 1308 165 147 0 chrX 70995661 70995933 -95654363 + MTD LTR MaLR 108 419 0 8 1126 1195 139 0 26 chrX 70995955 70996147 -95654149 - B2_Mm2 SINE B2 -7 188 2 8 1126 1241 41 0 0 chrX 70996174 70996320 -95653976 + B1_Mus2 SINE Alu 2 147 0 8 1126 216 0 0 0 chrX 70996320 70996344 -95653952 + (A)n Simple_repeat Simple_repeat 1 24 0 8 1126 207 0 0 0 chrX 70996600 70996623 -95653673 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 8 1126 2994 139 131 18 chrX 70996692 70997316 -95652980 - RMER19A LTR ERVK 0 737 43 8 1126 2960 132 24 4 chrX 70997316 70997772 -95652524 - MurERV4_19-int LTR ERVK -4111 1669 1205 8 1126 453 297 55 44 chrX 70997772 70997827 -95652469 + B4 SINE B4 31 87 -205 8 1126 718 120 13 125 chrX 70997827 70997979 -95652317 + B1_Mus2 SINE Alu 2 136 -11 8 1126 419 271 16 48 chrX 70998702 70998826 -95651470 + PB1D7 SINE Alu 1 120 0 8 1126 264 263 65 13 chrX 70998833 70998910 -95651386 + ID SINE ID 2 82 -142 8 1126 749 239 0 0 chrX 70999012 70999154 -95651142 + B1_Mur1 SINE Alu 2 143 -6 8 1126 905 228 96 0 chrX 70999170 70999367 -95650929 + B3 SINE B2 1 216 0 8 1126 266 180 0 16 chrX 70999896 70999958 -95650338 + CT-rich Low_complexity Low_complexity 2 62 0 8 1126 187 206 0 0 chrX 71000535 71000569 -95649727 + MIRc SINE MIR 63 96 -172 1 1126 776 57 48 8 chrX 71001343 71001468 -95648828 + BC1_Mm scRNA scRNA 1 130 -22 2 1126 227 299 0 61 chrX 71003622 71003749 -95646547 + polypyrimidine Low_complexity Low_complexity 1 119 0 3 1126 1133 68 0 0 chrX 71005993 71006140 -95644156 - B1_Mus1 SINE Alu 0 148 2 4 1126 186 71 0 0 chrX 71006725 71006753 -95643543 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 5 1126 1111 95 0 0 chrX 71006759 71006906 -95643390 - B1_Mus2 SINE Alu 0 147 1 6 1126 726 235 41 91 chrX 71007035 71007255 -95643041 + ID_B1 SINE B4 3 211 -13 7 1126 369 0 0 0 chrX 71008862 71008903 -95641393 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 1126 631 121 0 0 chrX 71009922 71010013 -95640283 + 4.5SRNA scRNA scRNA 1 91 -3 9 1126 1058 88 0 0 chrX 71010015 71010152 -95640144 + B1_Mus2 SINE Alu 1 137 -10 1 1126 234 0 0 0 chrX 71010152 71010178 -95640118 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1 1126 1088 55 13 27 chrX 71010234 71010384 -95639912 + B1_Mus1 SINE Alu 1 148 0 1 1126 354 186 0 0 chrX 71010386 71010472 -95639824 + A-rich Low_complexity Low_complexity 1 86 0 1 1126 929 213 49 10 chrX 71018377 71018581 -95631715 - B3 SINE B2 0 216 5 1 1126 619 253 80 0 chrX 71018585 71018735 -95631561 - ID_B1 SINE B4 0 224 63 1 1126 478 224 112 0 chrX 71028301 71028408 -95621888 + B1_Mur1 SINE Alu 24 142 -7 1 1126 202 406 19 9 chrX 71029553 71029660 -95620636 + L2a LINE L2 3317 3424 -2 1 1126 628 281 0 13 chrX 71029758 71029914 -95620382 + ID_B1 SINE B4 74 223 -1 1 1126 471 304 14 21 chrX 71030845 71030986 -95619310 - RSINE1 SINE B4 -23 142 3 1 1126 186 43 0 0 chrX 71031039 71031062 -95619234 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 2 1126 260 359 123 7 chrX 71031102 71031256 -95619040 - MIR3 SINE MIR -4 204 33 2 1126 703 153 70 35 chrX 71031484 71031626 -95618670 + B1_Mus1 SINE Alu 1 147 -1 2 1126 208 250 0 19 chrX 71035934 71035987 -95614309 + CT-rich Low_complexity Low_complexity 2 53 0 2 1126 773 200 7 0 chrX 71036362 71036507 -95613789 + B1_Mus1 SINE Alu 2 147 -1 2 1126 1045 212 225 12 chrX 71037791 71038231 -95612065 - RMER4B LTR ERVK -8 577 8 2 1126 1042 66 7 0 chrX 71038260 71038396 -95611900 + B1_Mus2 SINE Alu 1 137 -10 2 1127 396 0 0 0 chrX 71042282 71042326 -95607970 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1127 275 317 49 0 chrX 71042540 71042622 -95607674 - BC1_Mm scRNA scRNA -66 86 1 2 1127 305 100 0 20 chrX 71042649 71042700 -95607596 + (TTCC)n Simple_repeat Simple_repeat 4 53 0 2 1127 601 279 25 0 chrX 71042710 71042871 -95607425 - B3A SINE B2 0 198 34 3 1127 268 292 83 0 chrX 71042910 71042982 -95607314 - PB1D9 SINE Alu -9 111 34 3 1127 212 346 40 97 chrX 71046066 71046248 -95604048 - MIRb SINE MIR 0 262 90 3 1127 323 169 39 78 chrX 71046510 71046587 -95603709 + L1MEg LINE L1 1873 1946 -4138 3 1127 234 157 157 0 chrX 71046813 71046864 -95603432 + B1F1 SINE Alu 35 93 -56 3 1127 234 221 88 38 chrX 71046939 71047019 -95603277 + ID_B1 SINE B4 141 224 0 3 1127 2369 160 73 0 chrX 71047222 71047646 -95602650 - RMER4B LTR ERVK -41 544 90 3 1127 420 149 127 82 chrX 71047745 71047855 -95602441 - RMER4B LTR ERVK -351 115 1 3 1127 390 105 0 0 chrX 71047855 71047912 -95602384 - MurERV4-int LTR ERVK -2 5258 5202 3 1127 2450 136 56 29 chrX 71047912 71048056 -95602240 - MurERV4-int LTR ERVK -3588 1672 1536 3 1127 1402 69 16 0 chrX 71048056 71048244 -95602052 + B2_Mm2 SINE B2 2 192 -3 3 1127 2450 136 56 29 chrX 71048244 71048545 -95601751 - MurERV4-int LTR ERVK -3725 1535 1215 3 1127 891 132 0 32 chrX 71048540 71048696 -95601600 - MurERV4-int LTR ERVK -4207 1053 903 3 1127 898 158 0 20 chrX 71048771 71048920 -95601376 - B1_Mur3 SINE Alu -1 148 3 3 1127 317 276 58 84 chrX 71048920 71048973 -95601323 - MT2B2 LTR ERVL -429 155 107 3 1127 350 269 0 0 chrX 71048989 71049067 -95601229 + ID_B1 SINE B4 93 170 -54 4 1127 336 274 37 64 chrX 71049067 71049098 -95601198 + PB1D10 SINE Alu 12 117 0 4 1127 198 156 0 0 chrX 71049441 71049486 -95600810 + T-rich Low_complexity Low_complexity 5 49 0 4 1127 527 35 47 0 chrX 71049504 71049589 -95600707 - L1Md_T LINE L1 0 6582 6494 4 1127 2770 41 3 0 chrX 71049589 71049934 -95600362 + L1Md_F2 LINE L1 5865 6210 -372 4 1127 1490 47 16 0 chrX 71050004 71050196 -95600100 - B2_Mm2 SINE B2 0 195 1 4 1127 335 277 202 0 chrX 71050241 71050269 -95600027 + B1F2 SINE Alu 1 143 -6 4 1127 397 275 0 0 chrX 71050269 71050360 -95599936 + ID_B1 SINE B4 128 218 -6 4 1127 1136 61 0 7 chrX 71050690 71050838 -95599458 + B1_Mus2 SINE Alu 1 147 0 4 1127 644 312 54 60 chrX 71050839 71051190 -95599106 + MER63D DNA AcHobo 97 445 -616 4 1127 263 232 18 0 chrX 71051755 71051811 -95598485 + ID4_ SINE ID 27 83 0 5 1127 931 91 182 0 chrX 71051830 71051984 -95598312 + B2_Mm2 SINE B2 5 186 -9 5 1127 1043 80 13 0 chrX 71051985 71052135 -95598161 + (GAAA)n Simple_repeat Simple_repeat 1 152 0 5 1127 2226 147 32 3 chrX 71052190 71052565 -95597731 + ORR1B1 LTR MaLR 1 386 -8 5 1127 1361 62 17 0 chrX 71052756 71052933 -95597363 + B2_Mm2 SINE B2 1 180 -15 5 1127 342 0 0 0 chrX 71052934 71052972 -95597324 + (GA)n Simple_repeat Simple_repeat 2 39 0 5 1127 284 309 39 54 chrX 71053352 71053386 -95596910 - B1F SINE Alu -10 139 107 5 1127 1164 96 24 92 chrX 71053386 71053549 -95596747 - B2_Mm2 SINE B2 -3 192 42 5 1127 1191 48 0 0 chrX 71053549 71053695 -95596601 - B1_Mus1 SINE Alu 0 148 3 5 1127 1164 96 24 92 chrX 71053695 71053737 -95596559 - B2_Mm2 SINE B2 -154 41 1 5 1127 284 309 39 54 chrX 71053737 71053832 -95596464 - B1F SINE Alu -43 106 12 5 1127 248 98 24 0 chrX 71054177 71054218 -95596078 + B4A SINE B4 4 45 -247 5 1127 1004 221 221 86 chrX 71054235 71054432 -95595864 + MTD LTR MaLR 1 208 -211 6 1127 1033 110 0 14 chrX 71054432 71054580 -95595716 + B1_Mus1 SINE Alu 2 147 -1 6 1127 1004 221 221 86 chrX 71054580 71054744 -95595552 + MTD LTR MaLR 209 411 -8 6 1127 189 107 0 0 chrX 71054825 71054853 -95595443 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1127 321 330 70 0 chrX 71054858 71054958 -95595338 + B1_Mur1 SINE Alu 34 140 -9 6 1127 222 200 0 0 chrX 71054970 71055015 -95595281 + GA-rich Low_complexity Low_complexity 2 46 0 6 1127 506 254 14 36 chrX 71055030 71055169 -95595127 + B4A SINE B4 99 234 -58 6 1127 862 222 17 0 chrX 71055231 71055407 -95594889 + B3 SINE B2 27 205 -11 6 1127 333 299 86 0 chrX 71055427 71055544 -95594752 + ID_B1 SINE B4 77 203 -21 6 1127 348 345 18 0 chrX 71055632 71055745 -95594551 + B4A SINE B4 51 165 -127 6 1127 21 0 0 0 chrX 71055861 71055882 -95594414 + AT_rich Low_complexity Low_complexity 1 21 0 6 1127 725 190 444 5 chrX 71055910 71056121 -95594175 + MT2A LTR ERVL 1 306 -227 7 1127 1515 43 27 0 chrX 71056302 71056460 -95593836 + B2_Mm1a SINE B2 2 159 -34 7 1127 180 97 0 0 chrX 71056460 71056491 -95593805 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 7 1127 1515 43 27 0 chrX 71056491 71056517 -95593779 + B2_Mm1a SINE B2 160 190 -3 7 1127 273 284 44 22 chrX 71056540 71056613 -95593683 + PB1D10 SINE Alu 1 75 -42 7 1127 274 291 133 19 chrX 71056613 71056641 -95593655 + PB1D10 SINE Alu 1 117 0 7 1127 287 224 39 13 chrX 71056641 71056718 -95593578 + ID_B1 SINE B4 146 224 0 7 1127 184 225 0 0 chrX 71056830 71056870 -95593426 + L3 LINE CR1 113 152 -4337 7 1127 3327 36 10 0 chrX 71057387 71057528 -95592768 + MTA_Mm LTR MaLR 1 143 -253 7 1127 213 39 0 0 chrX 71057528 71057554 -95592742 + (G)n Simple_repeat Simple_repeat 1 26 0 7 1127 3327 36 10 0 chrX 71057554 71057804 -95592492 + MTA_Mm LTR MaLR 144 395 -1 7 1127 776 238 0 0 chrX 71058082 71058225 -95592071 + B1_Mur1 SINE Alu 1 143 -6 7 1127 255 31 0 0 chrX 71058256 71058288 -95592008 + (TTG)n Simple_repeat Simple_repeat 2 33 0 8 1127 1141 65 0 0 chrX 71058288 71058426 -95591870 - B1_Mus2 SINE Alu -8 139 2 8 1127 399 176 250 19 chrX 71058562 71058666 -95591630 - ID_B1 SINE B4 0 224 97 8 1127 680 121 194 0 chrX 71058956 71059080 -95591216 + B1_Mur4 SINE Alu 3 150 0 8 1127 901 253 114 39 chrX 71059197 71059584 -95590712 + L1MB5 LINE L1 5751 6166 -8 8 1127 512 169 188 31 chrX 71059930 71060058 -95590238 - B1_Mur2 SINE Alu -1 148 1 8 1127 183 306 83 0 chrX 71060818 71060890 -95589406 - MIR3 SINE MIR -32 176 99 8 1127 1129 22 58 0 chrX 71061521 71061659 -95588637 - B1_Mm SINE Alu 0 147 2 8 1127 321 242 176 0 chrX 71061798 71061889 -95588407 - PB1D10 SINE Alu -9 108 2 8 1127 187 377 18 70 chrX 71063118 71063232 -95587064 + L3b LINE CR1 336 443 -39 8 1127 188 213 0 21 chrX 71063342 71063390 -95586906 - MIR SINE MIR -128 134 88 9 1127 666 101 60 146 chrX 71063405 71063556 -95586740 + B1_Mus1 SINE Alu 2 139 -9 9 1127 477 0 0 0 chrX 71064008 71064061 -95586235 + (TAA)n Simple_repeat Simple_repeat 3 55 0 9 1127 461 227 0 0 chrX 71064070 71064145 -95586151 + B3 SINE B2 6 80 -136 9 1127 1158 119 56 11 chrX 71064252 71064430 -95585866 + B2_Mm2 SINE B2 1 186 -9 9 1127 266 245 123 0 chrX 71064854 71064960 -95585336 + L1M4 LINE L1 3884 4002 -2144 9 1127 194 150 25 0 chrX 71065045 71065085 -95585211 + (TAA)n Simple_repeat Simple_repeat 2 42 0 9 1127 826 241 34 24 chrX 71065090 71065298 -95584998 + B3 SINE B2 1 210 -6 9 1127 191 95 48 0 chrX 71065331 71065373 -95584923 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 9 1127 1231 35 7 0 chrX 71065386 71065531 -95584765 - B1_Mm SINE Alu 0 147 2 9 1127 321 225 42 0 chrX 71065584 71065655 -95584641 + L1M4 LINE L1 4309 4382 -1764 9 1127 216 178 22 0 chrX 71065655 71065700 -95584596 + B4 SINE B4 2 47 -245 1 1127 401 225 67 11 chrX 71065752 71065842 -95584454 + B1F SINE Alu 47 141 -8 1 1127 296 26 0 0 chrX 71065845 71065884 -95584412 + L1M4 LINE L1 4377 4415 -1731 1 1127 750 187 25 136 chrX 71065884 71066126 -95584170 + B3 SINE B2 2 216 0 1 1127 1149 58 0 0 chrX 71066136 71066274 -95584022 + B1_Mus1 SINE Alu 1 138 -10 1 1127 221 0 0 33 chrX 71066274 71066304 -95583992 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1127 594 165 110 17 chrX 71066397 71066570 -95583726 + L1M4 LINE L1 4557 4745 -1401 9 1127 356 127 24 48 chrX 71066594 71066677 -95583619 + L1M4 LINE L1 5358 5438 -746 9 1127 352 252 0 64 chrX 71066677 71066787 -95583509 + BC1_Mm scRNA scRNA 2 104 -48 1 1127 844 175 171 0 chrX 71066804 71067015 -95583281 + L1M4 LINE L1 5483 5729 -454 9 1127 484 273 242 55 chrX 71067183 71067365 -95582931 + B3 SINE B2 1 216 0 1 1127 1021 72 57 14 chrX 71067882 71068023 -95582273 - B1_Mus1 SINE Alu -1 147 1 1 1127 963 80 72 0 chrX 71068044 71068182 -95582114 - B1_Mus1 SINE Alu 0 148 1 1 1127 22 0 0 0 chrX 71070052 71070074 -95580222 + GC_rich Low_complexity Low_complexity 1 22 0 1 1127 660 111 0 0 chrX 71071581 71071680 -95578616 + (TTCC)n Simple_repeat Simple_repeat 3 101 0 1 1127 882 185 7 0 chrX 71071682 71071828 -95578468 - B1_Mus1 SINE Alu -1 147 1 1 1127 7376 51 1 0 chrX 71072200 71073090 -95577206 - L1Md_F2 LINE L1 0 6582 5692 1 1127 1001 148 74 0 chrX 71073190 71073366 -95576930 + B2_Mm2 SINE B2 1 189 -6 1 1127 1076 67 0 0 chrX 71073373 71073508 -95576788 + B1_Mus1 SINE Alu 2 136 -12 1 1127 216 0 0 0 chrX 71073509 71073533 -95576763 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1127 1507 98 17 8 chrX 71073540 71073777 -95576519 + L1_Mus3 LINE L1 6395 6633 -5 1 1127 1089 68 89 0 chrX 71073783 71073929 -95576367 + B2_Mm1a SINE B2 2 160 -33 1 1127 237 83 0 0 chrX 71073929 71073965 -95576331 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 1 1127 301 162 14 14 chrX 71073998 71074067 -95576229 + GA-rich Low_complexity Low_complexity 2 70 0 1 1127 301 309 0 102 chrX 71074067 71074175 -95576121 + MT2B LTR ERVL 163 259 -342 1 1127 694 257 7 0 chrX 71074082 71074218 -95576078 + B1_Mur1 SINE Alu 13 149 0 1 1127 877 232 23 46 chrX 71074223 71074440 -95575856 + B3 SINE B2 1 212 -4 1 1127 491 32 32 0 chrX 71074604 71074666 -95575630 - B2_Mm2 SINE B2 -131 64 1 1 1127 387 152 0 0 chrX 71074705 71074764 -95575532 + tRNA-Ala-GCY_ tRNA tRNA 9 67 -8 1 1127 432 194 0 0 chrX 71074795 71074867 -95575429 + B4A SINE B4 218 289 -3 1 1127 2100 105 73 69 chrX 71074963 71075265 -95575031 - RMER17C LTR ERVK 0 410 102 1 1127 1179 90 62 0 chrX 71075265 71075443 -95574853 + B2_Mm1t SINE B2 1 189 -4 1 1127 1156 71 0 0 chrX 71075443 71075582 -95574714 + B1_Mus1 SINE Alu 1 140 -8 1 1127 187 31 30 30 chrX 71075583 71075616 -95574680 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 1 1127 2100 105 73 69 chrX 71075616 71075718 -95574578 - RMER17C LTR ERVK -309 101 2 1 1127 1209 54 7 0 chrX 71075771 71075918 -95574378 + B1_Mus1 SINE Alu 1 148 0 1 1127 887 196 40 51 chrX 71075964 71076141 -95574155 + B3 SINE B2 3 177 -39 1 1127 877 158 0 20 chrX 71076182 71076331 -95573965 - B1_Mm SINE Alu 0 147 2 1 1127 587 166 19 23 chrX 71076424 71076539 -95573757 + B1_Mur1 SINE Alu 38 148 -1 1 1127 546 239 41 46 chrX 71076662 71077065 -95573231 + RMER17C LTR ERVK 77 481 -328 1 1127 658 195 16 8 chrX 71077163 71077287 -95573009 + B3 SINE B2 87 211 -5 1 1127 504 252 87 0 chrX 71077630 71077757 -95572539 + B1_Mur4 SINE Alu 1 138 -12 1 1127 180 111 0 0 chrX 71077758 71077785 -95572511 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 1 1127 925 251 0 0 chrX 71077785 71077968 -95572328 + B3 SINE B2 28 210 -6 1 1127 198 0 0 0 chrX 71078026 71078048 -95572248 + (GTTTG)n Simple_repeat Simple_repeat 3 24 0 1 1127 1120 30 0 0 chrX 71078054 71078187 -95572109 - B1_Mus2 SINE Alu -2 145 13 1 1127 180 0 0 0 chrX 71078196 71078216 -95572080 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 1127 2914 124 98 40 chrX 71078255 71078297 -95571999 + RMER4B LTR ERVK 1 32 -553 1 1127 1683 21 0 5 chrX 71078297 71078490 -95571806 + B2_Mm1a SINE B2 2 193 0 1 1127 2914 124 98 40 chrX 71078490 71078757 -95571539 + RMER4B LTR ERVK 33 329 -256 1 1127 1185 57 0 0 chrX 71078757 71078898 -95571398 + B1_Mus2 SINE Alu 1 141 -6 1 1127 387 0 0 0 chrX 71078902 71078945 -95571351 + (GGA)n Simple_repeat Simple_repeat 3 45 0 1 1127 2914 124 98 40 chrX 71078945 71079182 -95571114 + RMER4B LTR ERVK 330 580 -5 1 1127 1383 74 16 0 chrX 71079378 71079567 -95570729 - B2_Mm1a SINE B2 -1 192 1 1 1127 500 302 0 40 chrX 71079672 71079796 -95570500 + PB1D7 SINE Alu 1 119 -1 1 1127 608 100 318 0 chrX 71079838 71079948 -95570348 + B1_Mus1 SINE Alu 4 148 0 1 1127 373 303 61 65 chrX 71080001 71080128 -95570168 - L1M2 LINE L1 -855 5288 5160 1 1127 257 0 30 0 chrX 71080128 71080161 -95570135 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1127 373 303 61 65 chrX 71080161 71080172 -95570124 - L1M2 LINE L1 -984 5159 5152 1 1127 1145 88 0 0 chrX 71080172 71080319 -95569977 - B1_Mus2 SINE Alu 0 147 1 1 1127 373 303 61 65 chrX 71080319 71080472 -95569824 - L1M2 LINE L1 -992 5151 4997 1 1127 278 290 68 8 chrX 71080710 71080842 -95569454 - L1_Mur3 LINE L1 -1112 4768 4629 1 1127 427 224 195 17 chrX 71080891 71081009 -95569287 + B1_Mus2 SINE Alu 3 141 -6 1 1127 2263 117 138 58 chrX 71081200 71081598 -95568698 + RLTR23 LTR ERV1 1 430 0 1 1127 256 214 40 119 chrX 71081679 71081780 -95568516 - PB1D10 SINE Alu -10 107 15 1 1127 494 217 59 34 chrX 71081902 71082021 -95568275 + B1_Mur4 SINE Alu 29 150 0 1 1127 367 294 157 23 chrX 71082185 71082352 -95567944 - MER67C LTR ERV1 -464 247 57 1 1127 1296 101 0 21 chrX 71082352 71082391 -95567905 - B2_Mm2 SINE B2 -6 189 155 1 1127 461 47 16 0 chrX 71082391 71082455 -95567841 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 1127 1296 101 0 21 chrX 71082455 71082607 -95567689 - B2_Mm2 SINE B2 -41 154 3 1 1127 367 294 157 23 chrX 71082607 71082655 -95567641 - MER67C LTR ERV1 -655 56 5 1 1127 462 149 27 0 chrX 71082687 71082761 -95567535 - B1_Mus1 SINE Alu -67 81 6 1 1127 2297 155 92 62 chrX 71082842 71083008 -95567288 - RLTR24 LTR ERV1 0 529 363 1 1127 227 54 27 0 chrX 71083008 71083045 -95567251 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1 1127 1082 29 50 7 chrX 71083045 71083184 -95567112 - B1_Mus1 SINE Alu -3 145 1 1 1127 1390 79 11 0 chrX 71083186 71083375 -95566921 - B2_Mm1t SINE B2 -2 191 1 1 1127 790 147 66 7 chrX 71083379 71083516 -95566780 - B1_Mm SINE Alu -1 146 2 1 1127 2297 155 92 62 chrX 71083516 71083809 -95566487 - RLTR24 LTR ERV1 -167 362 48 1 1127 6443 135 19 66 chrX 71083810 71084672 -95565624 - Lx LINE L1 -3 6651 5827 1 1127 1112 95 0 0 chrX 71084672 71084819 -95565477 - B1_Mus1 SINE Alu -1 147 1 1 1127 27147 138 17 19 chrX 71084819 71085597 -95564699 - L1_Mm LINE L1 -42 5841 5115 1 1127 1221 48 0 7 chrX 71085597 71085744 -95564552 - B1_Mus2 SINE Alu -1 146 1 1 1127 27147 138 17 19 chrX 71085744 71087960 -95562336 - L1_Mm LINE L1 -769 5114 2868 1 1127 552 30 0 0 chrX 71087960 71088026 -95562270 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 1 1127 27147 138 17 19 chrX 71088026 71089681 -95560615 - L1_Mm LINE L1 -3016 2867 1204 1 1127 3253 92 2 0 chrX 71089674 71090109 -95560187 - L1VL4 LINE L1 -5513 789 354 1 1127 242 146 0 47 chrX 71090234 71090277 -95560019 - RLTR24 LTR ERV1 -470 59 19 1 1127 245 31 0 0 chrX 71090276 71090308 -95559988 - B3 SINE B2 -184 32 1 1 1127 438 302 93 0 chrX 71090444 71090573 -95559723 - ID_B1 SINE B4 -2 222 82 1 1127 779 260 282 0 chrX 71091003 71091226 -95559070 + B4A SINE B4 4 289 -3 1 1127 367 262 125 0 chrX 71091324 71091399 -95558897 + ID_B1 SINE B4 93 177 -47 1 1127 4405 155 63 76 chrX 71091399 71092312 -95557984 + RMER19B LTR ERVK 1 902 0 1 1127 586 118 10 10 chrX 71092354 71092457 -95557839 + (GAGAA)n Simple_repeat Simple_repeat 5 107 0 1 1127 278 258 65 0 chrX 71092457 71092519 -95557777 + PB1D7 SINE Alu 1 66 -54 1 1127 1188 138 11 0 chrX 71092605 71092793 -95557503 + B2_Mm1t SINE B2 1 190 -3 1 1127 819 170 7 7 chrX 71092849 71092985 -95557311 + B1F2 SINE Alu 1 136 -13 1 1127 225 0 0 0 chrX 71092985 71093010 -95557286 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1 1127 317 368 44 0 chrX 71093020 71093156 -95557140 - ERVL-E-int LTR ERVL -2079 3588 3447 1 1127 186 174 0 0 chrX 71093247 71093293 -95557003 + T-rich Low_complexity Low_complexity 1 46 0 1 1127 1230 34 0 13 chrX 71093293 71093442 -95556854 - B1_Mus2 SINE Alu 0 147 1 1 1127 690 162 0 0 chrX 71093446 71093551 -95556745 - B1_Mur4 SINE Alu 0 150 46 1 1127 518 158 0 19 chrX 71093625 71093728 -95556568 + (TCTCTG)n Simple_repeat Simple_repeat 1 101 0 1 1127 269 217 0 32 chrX 71093730 71093792 -95556504 - B1_Mur4 SINE Alu -90 60 1 1 1127 827 204 0 0 chrX 71094363 71094500 -95555796 + B1_Mur1 SINE Alu 5 141 -8 1 1127 390 250 11 21 chrX 71094679 71094773 -95555523 + B1F SINE Alu 57 149 0 1 1127 264 196 39 0 chrX 71094784 71094835 -95555461 + RSINE1 SINE B4 4 56 -109 1 1127 1064 214 91 11 chrX 71095029 71095293 -95555003 + MT2A LTR ERVL 1 285 -248 1 1127 1848 121 99 97 chrX 71095301 71095493 -95554803 - ORR1B1 LTR MaLR -10 384 224 1 1127 1109 49 28 14 chrX 71095493 71095637 -95554659 - B1_Mus2 SINE Alu 0 147 2 1 1127 1848 121 99 97 chrX 71095637 71095827 -95554469 - ORR1B1 LTR MaLR -171 223 1 1 1127 1060 203 67 8 chrX 71095827 71096063 -95554233 + MT2A LTR ERVL 284 533 0 1 1127 391 213 20 69 chrX 71096063 71096151 -95554145 + PB1D10 SINE Alu 35 117 0 1 1127 236 196 0 82 chrX 71096697 71096758 -95553538 + B4A SINE B4 189 244 -48 1 1127 305 289 71 10 chrX 71096861 71096959 -95553337 + B4A SINE B4 189 292 0 1 1127 849 189 0 20 chrX 71097071 71097222 -95553074 - B1_Mur4 SINE Alu 0 150 3 1 1127 992 154 0 7 chrX 71097802 71097952 -95552344 - B1_Mur4 SINE Alu 0 150 2 1 1127 233 291 28 10 chrX 71097990 71098067 -95552229 + B1F SINE Alu 12 90 -27 1 1127 550 248 25 8 chrX 71098070 71098192 -95552104 + B1F SINE Alu 21 144 -5 2 1127 1157 55 7 7 chrX 71098213 71098360 -95551936 + B1_Mm SINE Alu 1 147 0 2 1127 1185 64 108 23 chrX 71098364 71098511 -95551785 + B2_Mm1a SINE B2 2 162 -31 2 1127 189 0 0 0 chrX 71098511 71098532 -95551764 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 2 1127 1185 64 108 23 chrX 71098532 71098560 -95551736 + B2_Mm1a SINE B2 163 192 -1 2 1127 21 71 0 0 chrX 71099153 71099195 -95551101 + AT_rich Low_complexity Low_complexity 1 42 0 2 1127 210 128 0 0 chrX 71099288 71099327 -95550969 + (T)n Simple_repeat Simple_repeat 1 39 0 2 1127 399 21 0 0 chrX 71099654 71099702 -95550594 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1127 335 296 102 0 chrX 71103867 71103965 -95546331 - B1_Mus2 SINE Alu -15 132 25 2 1127 880 240 54 0 chrX 71103987 71104191 -95546105 - ID_B1 SINE B4 -8 216 2 2 1127 258 222 0 31 chrX 71104469 71104534 -95545762 + L1MC4 LINE L1 7799 7861 -181 2 1127 183 189 0 145 chrX 71107194 71107256 -95543040 - L4 LINE RTE -1560 469 417 2 1127 190 279 23 102 chrX 71107221 71107309 -95542987 + L2c LINE L2 3101 3181 -206 2 1127 324 277 110 62 chrX 71108702 71108848 -95541448 + ID_B1 SINE B4 4 156 -68 2 1127 216 315 202 0 chrX 71108783 71108872 -95541424 + PB1D7 SINE Alu 5 111 -9 2 1127 739 240 0 0 chrX 71108889 71109018 -95541278 + B1_Mur1 SINE Alu 9 137 -12 2 1127 488 146 0 11 chrX 71109018 71109108 -95541188 + T-rich Low_complexity Low_complexity 4 92 0 2 1127 1184 68 0 13 chrX 71109108 71109257 -95541039 - B1_Mus2 SINE Alu 0 147 1 2 1127 357 24 0 0 chrX 71109271 71109313 -95540983 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 2 1127 269 250 13 0 chrX 71111694 71111770 -95538526 + GA-rich Low_complexity Low_complexity 2 78 0 2 1127 349 176 213 13 chrX 71111773 71111848 -95538448 + 5S rRNA rRNA 1 90 -31 2 1127 602 194 46 0 chrX 71111904 71112012 -95538284 + B1_Mus2 SINE Alu 26 138 -9 2 1127 573 342 0 0 chrX 71116440 71116592 -95533704 + RSINE1 SINE B4 2 153 -12 2 1127 306 0 0 0 chrX 71118294 71118328 -95531968 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1127 1243 48 0 0 chrX 71118558 71118705 -95531591 - B1_Mus2 SINE Alu 0 147 1 2 1127 1902 77 4 4 chrX 71118853 71119114 -95531182 - L1_Mus1 LINE L1 -183 6384 6124 2 1127 892 143 11 54 chrX 71119114 71119299 -95530997 + L1Md_F2 LINE L1 6406 6582 0 2 1127 228 238 0 0 chrX 71119349 71119391 -95530905 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1127 1662 11 16 0 chrX 71119531 71119716 -95530580 + B2_Mm1a SINE B2 2 189 -4 2 1127 287 237 205 0 chrX 71120365 71120473 -95529823 - MIR SINE MIR -21 241 102 2 1127 202 290 0 31 chrX 71122531 71122595 -95527701 + G-rich Low_complexity Low_complexity 2 63 0 2 1127 305 274 8 127 chrX 71123132 71123159 -95527137 + MT2B2 LTR ERVL 142 152 -432 2 1127 551 270 5 15 chrX 71123159 71123286 -95527010 + B1F1 SINE Alu 1 128 -21 2 1127 1112 72 0 0 chrX 71123286 71123424 -95526872 + B1_Mus1 SINE Alu 2 139 -9 2 1127 410 312 46 66 chrX 71123424 71123447 -95526849 + B1_Mur3 SINE Alu 129 148 -1 2 1127 628 140 28 0 chrX 71123442 71123549 -95526747 + B1_Mus1 SINE Alu 34 143 -5 2 1127 957 116 0 0 chrX 71123561 71123707 -95526589 + (GGGGA)n Simple_repeat Simple_repeat 5 150 0 2 1127 1422 50 0 0 chrX 71123709 71123888 -95526408 + (GGAGA)n Simple_repeat Simple_repeat 1 179 0 2 1127 206 273 29 57 chrX 71124579 71124649 -95525647 + MIR SINE MIR 24 91 -117 2 1127 205 208 19 0 chrX 71126096 71126149 -95524147 + (CTG)n Simple_repeat Simple_repeat 3 56 0 2 1127 385 301 68 0 chrX 71127706 71127809 -95522487 - B1F1 SINE Alu -39 110 1 2 1127 737 129 0 75 chrX 71127861 71127984 -95522312 + B1_Mm SINE Alu 22 137 -10 2 1127 414 0 0 0 chrX 71127984 71128030 -95522266 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 2 1127 500 288 65 0 chrX 71128065 71128204 -95522092 + B1F2 SINE Alu 2 149 0 2 1127 581 159 5 2 chrX 71128381 71128493 -95521803 - B1_Mus1 SINE Alu 0 120 8 2 1127 416 167 29 86 chrX 71128403 71128508 -95521788 - MT2B LTR ERVL -350 251 153 2 1127 226 284 32 74 chrX 71128438 71128533 -95521763 + YREP_Mm Unknown Unknown 256 346 -1466 2 1127 769 49 0 10 chrX 71128538 71128641 -95521655 + B1_Mus2 SINE Alu 46 147 0 2 1127 528 283 136 17 chrX 71128662 71128838 -95521458 - B3A SINE B2 -1 197 1 2 1127 323 279 45 0 chrX 71128838 71128923 -95521373 - PB1D10 SINE Alu -29 91 1 2 1127 272 338 0 0 chrX 71128868 71128939 -95521357 - B4 SINE B4 -152 140 70 2 1127 641 231 91 5 chrX 71128952 71129161 -95521135 - L1ME1 LINE L1 -99 6080 5854 2 1127 612 138 0 0 chrX 71129190 71129306 -95520990 + (TG)n Simple_repeat Simple_repeat 2 117 0 2 1127 603 306 14 0 chrX 71129311 71129520 -95520776 - L1MD LINE L1 -419 5823 5612 2 1127 748 127 0 0 chrX 71129529 71129647 -95520649 - RLTR11B LTR ERVK 0 453 336 2 1127 917 83 23 0 chrX 71129641 71129773 -95520523 - B2_Mm2 SINE B2 -3 192 58 2 1127 474 307 108 16 chrX 71129752 71129881 -95520415 + B3A SINE B2 21 161 -37 2 1127 931 154 14 14 chrX 71130054 71130199 -95520097 - B1_Mur4 SINE Alu 0 150 6 2 1127 295 182 18 0 chrX 71130244 71130299 -95519997 + MLT1F1 LTR MaLR 3 58 -511 2 1127 455 283 9 9 chrX 71130302 71130416 -95519880 + PB1D10 SINE Alu 3 116 -1 2 1127 2621 111 12 22 chrX 71130431 71130844 -95519452 - RLTR28 LTR ERVL -1 523 115 2 1127 658 246 0 8 chrX 71130853 71130984 -95519312 + ID_B1 SINE B4 93 222 -2 2 1127 375 23 0 0 chrX 71131549 71131593 -95518703 + (TTCC)n Simple_repeat Simple_repeat 3 46 0 2 1127 250 327 51 93 chrX 71131610 71131625 -95518671 + MT2B LTR ERVL 152 161 -440 2 1127 726 203 57 21 chrX 71131625 71131766 -95518530 + B1_Mus2 SINE Alu 2 147 0 2 1127 1009 205 80 5 chrX 71131800 71132001 -95518295 - B3 SINE B2 0 216 1 2 1127 517 206 0 47 chrX 71132011 71132118 -95518178 - B1_Mur2 SINE Alu 0 149 48 2 1127 561 200 36 9 chrX 71132179 71132290 -95518006 - PB1D10 SINE Alu -2 115 2 2 1127 1357 86 16 11 chrX 71132646 71132835 -95517461 + B2_Mm2 SINE B2 1 190 -5 2 1127 1026 231 39 0 chrX 71132923 71133131 -95517165 + B3 SINE B2 1 216 0 2 1127 31 26 0 0 chrX 71133144 71133182 -95517114 + AT_rich Low_complexity Low_complexity 1 38 0 2 1127 693 129 118 24 chrX 71133277 71133404 -95516892 - B1_Mur4 SINE Alu 0 150 12 2 1127 789 190 0 52 chrX 71133430 71133585 -95516711 - B1_Mur3 SINE Alu 0 149 3 2 1127 356 305 9 71 chrX 71133597 71133611 -95516685 - PB1 SINE Alu -20 107 72 2 1127 284 297 166 13 chrX 71133611 71133635 -95516661 - ID_B1 SINE B4 -33 191 157 2 1127 1134 95 0 20 chrX 71133635 71133786 -95516510 - B1_Mus1 SINE Alu 0 148 1 2 1127 356 305 9 71 chrX 71133786 71133860 -95516436 - PB1 SINE Alu -56 71 2 2 1127 284 297 166 13 chrX 71133860 71133918 -95516378 - ID_B1 SINE B4 -68 156 12 2 1127 262 406 0 9 chrX 71133960 71134067 -95516229 + B1_Mur2 SINE Alu 1 106 -43 2 1127 996 215 36 36 chrX 71134157 71134379 -95515917 - MTC LTR MaLR 0 421 200 2 1127 1149 44 0 14 chrX 71134600 71134739 -95515557 + B1_Mm SINE Alu 1 137 -10 2 1127 216 0 0 0 chrX 71134739 71134763 -95515533 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1127 525 263 146 0 chrX 71134787 71134924 -95515372 + ID_B1 SINE B4 3 159 -65 2 1127 824 257 90 16 chrX 71134943 71135227 -95515069 - MLT1G1 LTR MaLR -293 302 1 2 1127 502 274 234 21 chrX 71135228 71135656 -95514640 + L1M5 LINE L1 2195 2713 -3433 2 1127 225 65 0 0 chrX 71135761 71135792 -95514504 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1127 23 33 0 0 chrX 71135816 71135846 -95514450 + AT_rich Low_complexity Low_complexity 1 30 0 2 1127 370 259 23 23 chrX 71135846 71135860 -95514436 + B4 SINE B4 70 83 -209 2 1127 481 173 0 13 chrX 71135860 71135936 -95514360 + PB1D9 SINE Alu 1 75 -45 2 1127 256 289 67 104 chrX 71135936 71135957 -95514339 + MT2B2 LTR ERVL 165 257 -327 2 1127 279 0 0 0 chrX 71135957 71135988 -95514308 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 2 1127 256 289 67 104 chrX 71135988 71136022 -95514274 + MT2B2 LTR ERVL 258 290 -294 2 1127 226 295 48 60 chrX 71136044 71136127 -95514169 + MT2B LTR ERVL 176 257 -344 2 1127 665 222 0 0 chrX 71136055 71136172 -95514124 + B1_Mur2 SINE Alu 33 149 0 2 1127 463 260 163 0 chrX 71136191 71136314 -95513982 + B1F2 SINE Alu 7 149 0 2 1127 227 241 100 78 chrX 71141908 71141998 -95508298 + MER5A DNA MER1_type 58 149 -40 2 1127 1259 35 7 0 chrX 71143734 71143879 -95506417 + B1_Mm SINE Alu 2 147 0 2 1127 567 213 70 16 chrX 71144032 71144161 -95506135 - ID_B1 SINE B4 -9 215 80 2 1127 709 168 9 0 chrX 71144339 71144452 -95505844 + PB1D9 SINE Alu 1 114 -6 2 1127 1130 59 0 0 chrX 71144488 71144624 -95505672 + B1_Mus1 SINE Alu 1 136 -12 2 1127 234 81 0 0 chrX 71144626 71144663 -95505633 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2 1127 537 244 81 0 chrX 71146139 71146262 -95504034 - ID_B1 SINE B4 -88 136 4 2 1127 683 160 39 39 chrX 71146344 71146474 -95503822 + B1_Mus1 SINE Alu 1 130 -18 2 1127 332 309 59 59 chrX 71146530 71146692 -95503604 + L1MB3 LINE L1 5879 6030 -153 2 1127 7310 58 30 0 chrX 71146692 71147621 -95502675 + Lx3_Mus LINE L1 6053 7009 0 2 1127 332 309 59 59 chrX 71147621 71147747 -95502549 + L1MB3 LINE L1 6031 6166 -17 2 1127 1508 53 21 0 chrX 71147821 71148009 -95502287 - B2_Mm1a SINE B2 -1 192 1 3 1127 1237 61 0 0 chrX 71148012 71148159 -95502137 - B1_Mus1 SINE Alu 0 148 2 3 1127 23 33 0 0 chrX 71148159 71148189 -95502107 + AT_rich Low_complexity Low_complexity 1 30 0 3 1127 918 260 0 62 chrX 71148199 71148408 -95501888 + B3A SINE B2 2 197 -1 3 1127 674 261 43 31 chrX 71148434 71148596 -95501700 + B3A SINE B2 1 164 -34 3 1127 321 26 0 0 chrX 71148596 71148634 -95501662 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1127 297 68 0 0 chrX 71148634 71148678 -95501618 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 1127 339 164 18 0 chrX 71148684 71148739 -95501557 - B1_Mus1 SINE Alu -88 60 5 3 1127 229 245 106 0 chrX 71148953 71149047 -95501249 + HAL1 LINE L1 1346 1449 -1058 3 1127 557 275 23 8 chrX 71149137 71149269 -95501027 - B1F SINE Alu -1 148 15 3 1127 243 170 0 0 chrX 71151049 71151096 -95499200 + (TGG)n Simple_repeat Simple_repeat 2 48 0 3 1127 300 338 60 0 chrX 71153116 71153249 -95497047 + B1_Mus2 SINE Alu 2 142 -5 3 1127 269 95 143 0 chrX 71153258 71153300 -95496996 + B3 SINE B2 1 48 -168 3 1127 1239 34 0 7 chrX 71153300 71153446 -95496850 + B1_Mm SINE Alu 1 145 -2 3 1127 679 159 121 0 chrX 71153484 71153616 -95496680 + B2_Mm2 SINE B2 27 174 -21 3 1127 251 53 26 0 chrX 71153617 71153655 -95496641 + B1_Mus2 SINE Alu 109 147 0 3 1127 207 0 0 0 chrX 71153659 71153682 -95496614 + (GA)n Simple_repeat Simple_repeat 2 24 0 3 1127 233 274 112 95 chrX 71154760 71154959 -95495337 + L2c LINE L2 3126 3317 -70 3 1127 434 268 27 40 chrX 71155011 71155159 -95495137 + B1F SINE Alu 3 148 -1 3 1127 241 163 40 20 chrX 71155639 71155689 -95494607 - tRNA-Gly-GGA tRNA tRNA -24 51 1 3 1127 204 40 0 0 chrX 71155889 71155914 -95494382 + (TGGGGG)n Simple_repeat Simple_repeat 6 30 0 3 1127 24 32 0 0 chrX 71156667 71156698 -95493598 + GC_rich Low_complexity Low_complexity 1 31 0 3 1127 381 232 188 23 chrX 71157424 71157552 -95492744 - B1F2 SINE Alu 0 149 1 3 1127 1320 101 21 0 chrX 71157809 71157998 -95492298 - B2_Mm1t SINE B2 0 193 1 3 1127 906 45 0 0 chrX 71158046 71158158 -95492138 - B1_Mus1 SINE Alu 0 148 37 3 1127 811 131 138 0 chrX 71158761 71158891 -95491405 - B1_Mur2 SINE Alu 0 149 2 3 1127 618 226 175 12 chrX 71158938 71159104 -95491192 - B3A SINE B2 -5 193 1 3 1127 442 279 147 0 chrX 71159106 71159235 -95491061 - B1_Mus1 SINE Alu 0 148 1 3 1127 315 232 68 27 chrX 71159254 71159368 -95490928 + B1F SINE Alu 28 143 -7 3 1127 292 296 156 9 chrX 71159472 71159581 -95490715 + B3 SINE B2 10 134 -82 3 1127 1290 67 84 0 chrX 71159934 71160113 -95490183 + B2_Mm2 SINE B2 2 195 0 3 1127 1163 43 43 0 chrX 71160640 71160781 -95489515 - B1_Mus1 SINE Alu 0 148 2 3 1127 254 219 88 88 chrX 71161224 71161349 -95488947 - RLTR25B LTR ERVK -463 565 441 3 1127 736 144 68 0 chrX 71161263 71161381 -95488915 - B1_Mur4 SINE Alu -20 130 5 3 1127 634 176 94 16 chrX 71161411 71161538 -95488758 + B1F SINE Alu 13 149 0 3 1127 1256 48 0 0 chrX 71161871 71162018 -95488278 + B1_Mus2 SINE Alu 1 147 0 3 1127 190 213 128 0 chrX 71163598 71163645 -95486651 - L2b LINE L2 -18 3357 3305 3 1127 1080 253 4 36 chrX 71163793 71164018 -95486278 - B4A SINE B4 -27 265 48 3 1127 407 246 175 17 chrX 71164031 71164151 -95486145 - B1_Mur1 SINE Alu -10 139 1 3 1127 1181 68 0 0 chrX 71165828 71165974 -95484322 - B1_Mus2 SINE Alu 0 147 2 3 1127 407 231 194 0 chrX 71165975 71166109 -95484187 + L1MC2 LINE L1 6176 6335 -9 3 1127 234 0 0 0 chrX 71168115 71168141 -95482155 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1127 1022 37 88 15 chrX 71168151 71168288 -95482008 + B1_Mm SINE Alu 1 147 0 3 1127 29 0 0 0 chrX 71168288 71168317 -95481979 + AT_rich Low_complexity Low_complexity 1 29 0 3 1127 348 307 0 11 chrX 71168486 71168575 -95481721 + B1_Mur3 SINE Alu 1 88 -61 3 1127 434 214 169 0 chrX 71168902 71168991 -95481305 + B1F SINE Alu 7 110 -7 3 1127 441 232 99 46 chrX 71169078 71169209 -95481087 - B1_Mur2 SINE Alu -3 146 9 3 1127 1180 81 0 7 chrX 71169240 71169389 -95480907 - B1_Mus1 SINE Alu 0 148 1 3 1127 359 312 92 15 chrX 71169750 71169880 -95480416 + ID_B1 SINE B4 82 221 -3 3 1127 1163 61 0 39 chrX 71170191 71170344 -95479952 + B1_Mus1 SINE Alu 2 148 0 3 1127 495 262 65 8 chrX 71170358 71170481 -95479815 - B1F1 SINE Alu -17 132 3 3 1127 271 294 8 92 chrX 71170481 71170514 -95479782 - MT2B LTR ERVL -441 160 139 3 1127 967 122 7 13 chrX 71170610 71170759 -95479537 + B1_Mus1 SINE Alu 1 148 0 3 1127 676 296 86 23 chrX 71170772 71170993 -95479303 + B4 SINE B4 35 269 -23 3 1127 1150 113 34 106 chrX 71171853 71171998 -95478298 + B2_Mm2 SINE B2 1 137 -58 3 140 1254 41 7 0 chrX 71171998 71172145 -95478151 + B1_Mus1 SINE Alu 1 148 0 3 1128 1521 73 5 0 chrX 71172153 71172344 -95477952 + B2_Mm1t SINE B2 1 192 -1 3 1128 1150 113 34 106 chrX 71172344 71172397 -95477899 + B2_Mm2 SINE B2 140 193 -2 3 1128 183 42 0 0 chrX 71172783 71172807 -95477489 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 1128 1308 20 0 0 chrX 71172807 71172954 -95477342 - B1_Mus2 SINE Alu 0 147 1 3 1128 885 184 7 0 chrX 71172964 71173105 -95477191 - B1_Mur2 SINE Alu -7 142 1 3 1128 1235 48 0 0 chrX 71173768 71173915 -95476381 + B1_Mus2 SINE Alu 1 147 0 3 1128 249 108 0 0 chrX 71173915 71173952 -95476344 + (A)n Simple_repeat Simple_repeat 1 37 0 3 1128 595 219 65 0 chrX 71174039 71174162 -95476134 - ID_B1 SINE B4 -8 216 86 3 1128 232 206 31 52 chrX 71176730 71176751 -95473545 + T-rich Low_complexity Low_complexity 79 98 0 3 1128 1560 31 0 45 chrX 71176751 71176951 -95473345 - B2_Mm1a SINE B2 -1 192 2 3 1128 232 206 31 52 chrX 71176951 71176977 -95473319 + T-rich Low_complexity Low_complexity 53 78 0 3 1128 1249 35 0 0 chrX 71176977 71177121 -95473175 - B1_Mus1 SINE Alu -1 147 4 3 1128 232 206 31 52 chrX 71177121 71177169 -95473127 + T-rich Low_complexity Low_complexity 4 52 0 3 1128 1139 197 10 5 chrX 71177183 71177392 -95472904 - B3 SINE B2 -6 210 1 3 1128 568 261 50 11 chrX 71177941 71178102 -95472194 - ID_B1 SINE B4 -50 242 76 3 1128 448 256 195 30 chrX 71178140 71178309 -95471987 - B3A SINE B2 0 198 2 3 1128 2471 155 54 7 chrX 71178570 71178784 -95471512 + RMER4A LTR ERVK 3 220 -246 3 1128 402 57 0 0 chrX 71178784 71178837 -95471459 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 1128 2471 155 54 7 chrX 71178837 71179065 -95471231 + RMER4A LTR ERVK 221 465 -1 3 1128 853 265 129 119 chrX 71179131 71179636 -95470660 + RMER4B LTR ERVK 18 527 -58 3 1128 1536 239 54 10 chrX 71179692 71180081 -95470215 + MYSERV16_I-int LTR ERVK 41 446 -4814 3 1128 1129 70 0 27 chrX 71180119 71180265 -95470031 + B1_Mus2 SINE Alu 1 142 -5 3 1128 3807 213 62 74 chrX 71180400 71180837 -95469459 + MYSERV16_I-int LTR ERVK 1 276 -2050 3 1128 893 65 117 31 chrX 71180837 71180965 -95469331 - B1_Mus1 SINE Alu -8 140 2 3 1128 3807 189 82 65 chrX 71180965 71181656 -95468640 + MYSERV16_I-int LTR ERVK 277 999 -1327 3 1128 1179 62 14 0 chrX 71181658 71181804 -95468492 - B1_Mus1 SINE Alu 0 148 1 3 1128 3717 114 58 18 chrX 71181804 71182253 -95468043 + MurERV4-int LTR ERVK 3777 4257 -1003 3 1128 1671 171 74 9 chrX 71182253 71182590 -95467706 - RLTR15 LTR ERVK 0 359 1 3 1128 3717 114 58 18 chrX 71182590 71182756 -95467540 + MurERV4-int LTR ERVK 4258 4417 -843 3 1128 1102 60 30 0 chrX 71182756 71182890 -95467406 + B1_Mus2 SINE Alu 1 138 -9 3 1128 207 0 0 0 chrX 71182890 71182913 -95467383 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 3 1128 927 183 0 0 chrX 71182913 71183093 -95467203 + GA-rich Low_complexity Low_complexity 1 180 0 3 1128 1686 16 21 0 chrX 71183096 71183285 -95467011 + B2_Mm1t SINE B2 1 193 0 3 1128 971 107 0 0 chrX 71183302 71183442 -95466854 + MurERV4-int LTR ERVK 4519 4658 -602 3 1128 2614 205 74 47 chrX 71183994 71184748 -95465548 + RMER19B LTR ERVK 2 902 0 3 1128 486 156 45 14 chrX 71184868 71184982 -95465314 + MurERV4_19-int LTR ERVK 4976 5075 -705 3 1128 904 278 59 89 chrX 71184984 71185233 -95465063 + MYSERV-int LTR ERVK 4526 4762 -1788 3 1128 1218 56 0 0 chrX 71185233 71185376 -95464920 + B1_Mus2 SINE Alu 2 144 -3 3 1128 904 278 59 89 chrX 71185376 71185585 -95464711 + MYSERV-int LTR ERVK 4763 4970 -1580 3 1128 1024 188 77 38 chrX 71185589 71185876 -95464420 + MYSERV-int LTR ERVK 6248 6545 -5 3 1128 631 223 167 61 chrX 71185876 71186245 -95464051 + RMER4B LTR ERVK 7 389 -77 3 1128 2992 40 47 13 chrX 71186245 71186628 -95463668 + MTA_Mm LTR MaLR 1 396 0 3 1128 580 283 118 96 chrX 71186628 71186665 -95463631 + RMER4B LTR ERVK 390 422 -44 3 1128 455 266 146 12 chrX 71186984 71187155 -95463141 + B3A SINE B2 1 194 -4 3 1128 325 207 321 9 chrX 71187155 71187267 -95463029 + B1_Mur2 SINE Alu 2 148 -1 3 1128 1071 83 20 7 chrX 71187949 71188095 -95462201 - B1_Mus1 SINE Alu 0 148 1 3 1128 225 295 77 33 chrX 71189510 71189601 -95460695 + LTR50 LTR ERVL 153 247 -548 3 1128 434 202 246 34 chrX 71190935 71191053 -95459243 + RSINE1 SINE B4 2 144 -21 3 1128 262 250 151 25 chrX 71191196 71191315 -95458981 + MIR SINE MIR 99 232 -30 3 1128 889 273 53 0 chrX 71199035 71199244 -95451052 - ID_B1 SINE B4 -4 220 1 3 1128 264 151 0 0 chrX 71199282 71199335 -95450961 + RLTR12A LTR ERVK 516 568 0 3 1128 283 344 29 59 chrX 71199335 71199411 -95450885 + ID SINE ID 14 85 -139 3 1128 317 189 53 0 chrX 71199411 71199475 -95450821 + B1F SINE Alu 2 68 -79 3 1128 375 42 0 0 chrX 71199637 71199685 -95450611 - B1_Mur4 SINE Alu -6 144 97 3 1128 389 300 87 70 chrX 71199654 71199826 -95450470 - ID_B1 SINE B4 -49 175 1 4 1128 423 0 0 0 chrX 71199858 71199905 -95450391 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1128 1096 65 65 0 chrX 71201242 71201381 -95448915 - B1_Mus1 SINE Alu 0 148 1 4 1128 431 233 60 0 chrX 71201450 71201552 -95448744 - PB1D9 SINE Alu 0 120 14 4 1128 1366 86 38 0 chrX 71202192 71202378 -95447918 - B2_Mm2 SINE B2 -1 194 2 4 1128 419 226 36 0 chrX 71206902 71206986 -95443310 + PB1D10 SINE Alu 22 108 -9 4 1128 432 0 0 0 chrX 71206986 71207034 -95443262 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 1128 223 302 96 44 chrX 71208199 71208334 -95441962 + MIR3 SINE MIR 55 196 -12 4 1128 222 266 172 0 chrX 71208336 71208400 -95441896 + ID4 SINE ID 1 75 -8 4 1128 396 0 0 0 chrX 71210383 71210427 -95439869 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 1128 360 0 0 0 chrX 71210427 71210466 -95439830 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1128 339 243 121 84 chrX 71210951 71211117 -95439179 + HAL1-3A_ME LINE L1 2267 2438 -420 4 1128 459 307 79 49 chrX 71213523 71213889 -95436407 + Charlie4a DNA MER1_type 69 445 -63 4 1128 352 204 30 129 chrX 71215363 71215464 -95434832 + PB1D10 SINE Alu 21 111 -6 4 1128 325 309 11 0 chrX 71215485 71215564 -95434732 - ID4 SINE ID -64 88 5 4 1128 336 258 43 11 chrX 71215579 71215673 -95434623 - PB1D10 SINE Alu -8 109 13 4 1128 236 338 12 12 chrX 71215624 71215705 -95434591 - B4A SINE B4 -147 145 65 4 1128 734 151 56 21 chrX 71215748 71215890 -95434406 - B1_Mus2 SINE Alu 0 147 1 4 1128 311 188 84 28 chrX 71215926 71215997 -95434299 + RLTR25B LTR ERVK 435 509 -519 4 1128 805 48 10 0 chrX 71215936 71216039 -95434257 + B1_Mm SINE Alu 44 147 0 4 1128 889 177 0 26 chrX 71216061 71216212 -95434084 + B1_Mur3 SINE Alu 2 148 -1 4 1128 544 268 14 14 chrX 71216245 71216385 -95433911 + B1F SINE Alu 5 144 -5 4 1128 198 0 0 0 chrX 71216391 71216413 -95433883 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 1128 390 227 91 20 chrX 71216679 71216778 -95433518 + PB1D9 SINE Alu 6 111 -9 4 1128 266 0 29 0 chrX 71216782 71216816 -95433480 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1128 659 250 14 0 chrX 71216910 71217054 -95433242 + B1_Mur1 SINE Alu 4 149 0 4 1128 512 281 77 28 chrX 71217077 71217220 -95433076 + RSINE1 SINE B4 14 163 -2 4 1128 26 0 0 0 chrX 71217233 71217259 -95433037 + AT_rich Low_complexity Low_complexity 1 26 0 4 1128 696 162 49 7 chrX 71217269 71217412 -95432884 + B1_Mur2 SINE Alu 1 149 0 4 1128 261 0 0 0 chrX 71217416 71217445 -95432851 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1128 185 0 0 39 chrX 71217951 71217977 -95432319 + (TTTTTG)n Simple_repeat Simple_repeat 6 30 0 4 1128 1232 55 0 0 chrX 71217977 71218123 -95432173 - B1_Mus2 SINE Alu 0 147 2 4 1128 2601 138 164 23 chrX 71218208 71218721 -95431575 - RMER4B LTR ERVK 0 585 1 4 1128 11139 131 18 5 chrX 71218721 71220422 -95429874 - MERVL_2A-int LTR ERVL -310 5451 3729 4 1128 5361 123 45 14 chrX 71220428 71221286 -95429010 - MERVL_2A-int LTR ERVL -2206 3555 2671 4 1128 401 255 30 50 chrX 71221376 71221475 -95428821 - RSINE1 SINE B4 -14 151 55 4 1128 579 194 27 27 chrX 71221995 71222106 -95428190 + B1_Mur2 SINE Alu 33 143 -6 4 1128 496 224 20 7 chrX 71222107 71222137 -95428159 - RCHARR1 DNA MER1_type -461 513 483 4 1128 454 288 6 93 chrX 71222137 71222298 -95427998 + B1F2 SINE Alu 3 149 0 4 1128 508 200 15 8 chrX 71222298 71222414 -95427882 - RCHARR1 DNA MER1_type -492 482 365 4 1128 1173 57 6 0 chrX 71222414 71222573 -95427723 + B2_Mm1a SINE B2 1 160 -33 4 1128 353 22 22 0 chrX 71222573 71222619 -95427677 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 4 1128 1166 61 7 7 chrX 71222626 71222774 -95427522 + B1_Mus1 SINE Alu 1 148 0 4 1128 230 268 139 40 chrX 71222775 71222876 -95427420 - RCHARR1 DNA MER1_type -646 328 218 4 1128 362 299 20 82 chrX 71222872 71223018 -95427278 + ID_B1 SINE B4 76 212 -12 4 1128 270 0 0 0 chrX 71223038 71223068 -95427228 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1128 387 41 0 0 chrX 71223068 71223116 -95427180 + (GA)n Simple_repeat Simple_repeat 1 49 0 4 1128 612 246 7 53 chrX 71223120 71223270 -95427026 - RSINE1 SINE B4 0 165 23 4 1128 339 309 156 59 chrX 71223294 71223666 -95426630 + RMER10A LTR ERVL 10 417 -25 4 1128 513 235 8 8 chrX 71223690 71223810 -95426486 - B4 SINE B4 -66 226 107 4 1128 386 259 25 59 chrX 71224944 71225063 -95425233 + PB1D10 SINE Alu 2 116 -1 4 1128 225 0 0 0 chrX 71225716 71225741 -95424555 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1128 682 280 9 91 chrX 71225741 71225973 -95424323 - ID_B1 SINE B4 -11 213 1 4 1128 216 0 0 0 chrX 71225991 71226015 -95424281 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1128 1199 34 7 0 chrX 71226015 71226152 -95424144 - B1_Mus2 SINE Alu -8 139 2 4 1128 808 73 0 0 chrX 71226158 71226268 -95424028 - B1_Mus1 SINE Alu 0 148 39 4 1128 1855 145 85 12 chrX 71226269 71226610 -95423686 - RMER19B LTR ERVK -17 885 520 4 1128 3522 18 5 0 chrX 71226610 71227004 -95423292 + MTA_Mm LTR MaLR 1 396 0 4 1128 8534 16 0 45 chrX 71227004 71227430 -95422866 + MTA_Mm-int LTR MaLR 1 390 -708 4 1128 7374 24 6 3 chrX 71227430 71228294 -95422002 + L1Md_F3 LINE L1 5719 6584 0 4 1128 8534 16 0 45 chrX 71228294 71229017 -95421279 + MTA_Mm-int LTR MaLR 391 1098 0 4 1128 3494 25 2 0 chrX 71229017 71229412 -95420884 + MTA_Mm LTR MaLR 1 396 0 4 1128 443 246 0 62 chrX 71229412 71229542 -95420754 - RMER19B LTR ERVK -378 524 403 4 1128 743 201 105 99 chrX 71229713 71230055 -95420241 - RLTR15 LTR ERVK -15 344 1 4 1128 2628 137 47 0 chrX 71230102 71230503 -95419793 - MTC LTR MaLR -1 420 1 4 1128 346 246 178 37 chrX 71230527 71230662 -95419634 + ID_B1 SINE B4 67 220 -4 4 1128 241 253 26 13 chrX 71230955 71231031 -95419265 + L1MB3 LINE L1 5584 5660 -508 4 1128 1043 222 44 83 chrX 71231062 71231273 -95419023 + L1MB3 LINE L1 5842 6058 -125 4 1128 518 309 0 7 chrX 71231273 71231423 -95418873 + B1F SINE Alu 1 149 0 4 1128 1043 222 44 83 chrX 71231423 71231549 -95418747 + L1MB3 LINE L1 6059 6166 -17 4 1128 228 190 180 49 chrX 71231559 71231620 -95418676 - ID4_ SINE ID -13 70 2 4 1128 474 306 37 15 chrX 71231652 71231788 -95418508 + RSINE1 SINE B4 3 141 -24 4 1128 1191 61 0 0 chrX 71231887 71232034 -95418262 + B1_Mus1 SINE Alu 2 148 0 4 1128 607 115 38 9 chrX 71232053 71232158 -95418138 + B1_Mur4 SINE Alu 42 149 -1 4 1128 257 286 0 14 chrX 71232448 71232519 -95417777 - ID4_ SINE ID 0 83 14 4 1128 321 290 26 70 chrX 71232596 71232711 -95417585 + PB1D10 SINE Alu 3 112 -5 4 1128 433 87 0 42 chrX 71232735 71232807 -95417489 + B1_Mus2 SINE Alu 1 69 -78 4 1128 864 206 53 26 chrX 71232778 71233020 -95417276 + RLTR20D LTR ERVK 301 539 -12 4 1128 866 173 0 0 chrX 71233043 71233176 -95417120 - B1_Mur4 SINE Alu -17 133 1 4 1128 317 180 0 0 chrX 71233220 71233270 -95417026 + B1_Mus2 SINE Alu 1 50 -97 4 1128 1970 78 11 0 chrX 71233270 71233553 -95416743 + ORR1A2 LTR MaLR 1 286 -41 4 1128 906 51 0 0 chrX 71233548 71233666 -95416630 + B1_Mm SINE Alu 30 147 0 4 1128 397 0 0 0 chrX 71233682 71233729 -95416567 + ORR1A2 LTR MaLR 272 318 -8 4 1128 563 140 50 0 chrX 71233729 71233820 -95416476 + B1_Mur2 SINE Alu 42 137 -12 4 1128 333 0 0 0 chrX 71233820 71233857 -95416439 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 4 1128 482 204 0 184 chrX 71233884 71233988 -95416308 - ID_B1 SINE B4 -2 222 139 4 1128 1127 82 0 14 chrX 71233988 71234136 -95416160 - B1_Mus2 SINE Alu 0 147 2 4 1128 482 204 0 184 chrX 71234136 71234199 -95416097 - ID_B1 SINE B4 -86 138 86 4 1128 546 229 132 76 chrX 71234202 71234491 -95415805 - L1MA8 LINE L1 -46 6245 5941 4 1128 1822 92 13 69 chrX 71234772 71235074 -95415222 + ORR1A2 LTR MaLR 1 285 -42 4 1128 1042 70 0 0 chrX 71235074 71235217 -95415079 + B2_Mm2 SINE B2 1 143 -52 4 1128 795 64 9 0 chrX 71235229 71235339 -95414957 + B1_Mus2 SINE Alu 37 147 0 4 1128 743 190 14 42 chrX 71235542 71235685 -95414611 - B1_Mur1 SINE Alu -8 141 3 4 1128 344 69 0 17 chrX 71235770 71235829 -95414467 - RMER19B LTR ERVK -844 58 1 4 1128 389 184 101 22 chrX 71236013 71236102 -95414194 + B3 SINE B2 121 216 0 4 1128 21 0 0 0 chrX 71236102 71236123 -95414173 + AT_rich Low_complexity Low_complexity 1 21 0 4 1128 530 127 16 41 chrX 71236489 71236612 -95413684 + C-rich Low_complexity Low_complexity 3 122 0 4 1128 346 235 59 39 chrX 71236612 71236714 -95413582 - ID_B1 SINE B4 -41 183 80 4 1128 654 49 0 0 chrX 71236724 71236806 -95413490 + (TG)n Simple_repeat Simple_repeat 1 82 0 4 1128 223 260 20 0 chrX 71236880 71236930 -95413366 - B1F SINE Alu -97 52 2 4 1128 1137 71 0 14 chrX 71237050 71237193 -95413103 + B1_Mus2 SINE Alu 5 145 -2 4 1128 1152 61 0 0 chrX 71237284 71237431 -95412865 - B1_Mus1 SINE Alu 0 148 2 4 1128 1264 126 44 146 chrX 71237495 71237858 -95412438 + RMER17C LTR ERVK 30 355 -55 4 1128 749 94 0 0 chrX 71237886 71237992 -95412304 - B2_Mm2 SINE B2 -88 107 2 4 1128 31 0 0 0 chrX 71238015 71238046 -95412250 + AT_rich Low_complexity Low_complexity 1 31 0 4 1128 546 126 0 11 chrX 71238250 71238338 -95411958 - B1_Mur3 SINE Alu -1 148 62 4 1128 250 130 0 85 chrX 71238285 71238344 -95411952 - MT2B LTR ERVL -337 264 211 4 1128 936 103 0 7 chrX 71238345 71238482 -95411814 - RMER10A LTR ERVL -305 137 2 4 1128 980 245 30 0 chrX 71238482 71238682 -95411614 - B3 SINE B2 -9 207 2 4 1128 365 148 73 12 chrX 71238732 71238814 -95411482 + MER110A LTR ERV1 55 141 -327 4 1128 1187 42 14 0 chrX 71239015 71239159 -95411137 + B1_Mus2 SINE Alu 2 147 0 4 1128 23 0 0 0 chrX 71239298 71239321 -95410975 + AT_rich Low_complexity Low_complexity 1 23 0 5 1128 192 125 0 0 chrX 71239321 71239353 -95410943 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1128 400 286 25 0 chrX 71239412 71239531 -95410765 - ID_B1 SINE B4 -16 208 87 5 1128 782 169 20 40 chrX 71239578 71239726 -95410570 - B1_Mur2 SINE Alu -2 147 3 5 1128 347 319 0 0 chrX 71239749 71239843 -95410453 + MER110 LTR ERV1 8 101 -390 5 1128 307 289 51 34 chrX 71239867 71239985 -95410311 + RLTR24 LTR ERV1 1 120 -409 5 1128 1623 32 16 0 chrX 71240549 71240738 -95409558 + B2_Mm1a SINE B2 2 193 0 5 1128 738 195 234 6 chrX 71240742 71240917 -95409379 - B3 SINE B2 0 216 2 5 1128 253 309 30 50 chrX 71241149 71241248 -95409048 + PB1D7 SINE Alu 15 111 -9 5 1128 379 279 18 0 chrX 71241403 71241514 -95408782 - PB1 SINE Alu -14 113 1 5 1128 180 0 0 0 chrX 71241555 71241575 -95408721 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1128 1189 61 0 13 chrX 71241575 71241713 -95408583 - B1_Mus2 SINE Alu -9 138 1 5 1128 1266 96 68 0 chrX 71241931 71242108 -95408188 + B2_Mm2 SINE B2 1 189 -6 5 1128 381 222 0 69 chrX 71242110 71242197 -95408099 - B3 SINE B2 -123 93 13 5 1128 282 318 0 0 chrX 71242216 71242282 -95408014 + tRNA-Ala-GCY_ tRNA tRNA 2 67 -8 5 1128 3085 26 0 0 chrX 71242282 71242628 -95407668 + ORR1A0 LTR MaLR 1 346 0 5 1128 253 370 0 36 chrX 71242628 71242639 -95407657 + ID4_ SINE ID 74 82 -1 5 1128 2077 196 81 41 chrX 71243257 71243984 -95406312 - RMER19B LTR ERVK 0 902 1 5 1128 617 236 141 5 chrX 71243985 71244177 -95406119 + ID_B1 SINE B4 5 222 -2 5 1128 776 189 14 20 chrX 71244213 71244359 -95405937 - B1_Mur3 SINE Alu 0 149 5 5 1128 234 214 24 12 chrX 71244388 71244473 -95405823 + GA-rich Low_complexity Low_complexity 3 88 0 5 1128 221 0 0 33 chrX 71245217 71245247 -95405049 + (TAA)n Simple_repeat Simple_repeat 2 30 0 5 1128 1205 48 0 0 chrX 71245251 71245397 -95404899 + B1_Mm SINE Alu 2 147 0 5 1128 201 74 0 0 chrX 71245397 71245424 -95404872 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1128 253 196 271 42 chrX 71245495 71245591 -95404705 + PB1D9 SINE Alu 1 118 -2 5 1128 2796 89 91 9 chrX 71245769 71246200 -95404096 + RMER4A LTR ERVK 1 466 0 5 1128 413 208 0 0 chrX 71246204 71246276 -95404020 - PB1D10 SINE Alu -37 80 9 5 1128 424 136 171 19 chrX 71246279 71246384 -95403912 - L1MEg LINE L1 -4676 1408 1288 5 1128 340 272 168 7 chrX 71246419 71246556 -95403740 - L1MEg LINE L1 -4877 1207 1049 5 1128 597 243 36 14 chrX 71246643 71246781 -95403515 + ID_B1 SINE B4 84 224 0 5 1128 230 284 49 57 chrX 71246765 71246888 -95403408 + MT2B2 LTR ERVL 134 255 -329 5 1128 278 268 14 0 chrX 71246825 71246896 -95403400 + PB1D10 SINE Alu 36 107 -10 5 1128 426 284 75 36 chrX 71246904 71247045 -95403251 + L1MD LINE L1 2298 2443 -3703 5 1128 1350 94 0 35 chrX 71247045 71247243 -95403053 + B2_Mm2 SINE B2 3 193 -2 5 1128 426 284 75 36 chrX 71247243 71247353 -95402943 + L1MD LINE L1 2444 2559 -3587 5 1128 966 75 90 0 chrX 71247355 71247489 -95402807 + B1_Mm SINE Alu 2 147 0 5 1128 354 98 0 0 chrX 71247491 71247542 -95402754 + (A)n Simple_repeat Simple_repeat 1 51 0 5 1128 241 287 45 11 chrX 71247651 71247739 -95402557 + L1M5 LINE L1 2669 2759 -3387 5 1128 1512 63 16 0 chrX 71247905 71248095 -95402201 + B2_Mm2 SINE B2 3 195 0 5 1128 1165 68 0 0 chrX 71248303 71248451 -95401845 - B1_Mus1 SINE Alu 0 148 1 5 1128 445 191 0 0 chrX 71248484 71248578 -95401718 + MER2 DNA MER2_type 113 206 -139 5 1128 408 40 0 0 chrX 71248717 71248767 -95401529 + (TTTTC)n Simple_repeat Simple_repeat 5 54 0 5 1128 1223 78 78 0 chrX 71248767 71248934 -95401362 - B2_Mm2 SINE B2 -15 180 1 5 1128 617 138 150 23 chrX 71249032 71249165 -95401131 - B1_Mur4 SINE Alu 0 150 1 5 1128 3082 120 90 6 chrX 71249289 71249776 -95400520 + RLTR12B LTR ERVK 1 528 0 5 1128 23 0 0 0 chrX 71249825 71249848 -95400448 + AT_rich Low_complexity Low_complexity 1 23 0 5 1128 1216 54 0 0 chrX 71249932 71250079 -95400217 - B1_Mus2 SINE Alu 0 147 1 5 1128 936 243 14 5 chrX 71250086 71250301 -95399995 - ID_B1 SINE B4 -2 222 6 5 1128 299 313 12 0 chrX 71250299 71250382 -95399914 + MER2 DNA MER2_type 261 344 -1 5 1128 290 280 113 0 chrX 71250382 71250532 -95399764 + L1M5 LINE L1 2852 3018 -3128 5 1128 332 340 0 49 chrX 71250566 71250668 -95399628 + PB1 SINE Alu 27 123 -4 5 1128 478 221 93 0 chrX 71250678 71250806 -95399490 + B1_Mur1 SINE Alu 2 147 -2 5 1128 1096 153 82 24 chrX 71250846 71251054 -95399242 + URR1B DNA MER1_type 5 224 -1 5 1128 690 243 0 7 chrX 71251059 71251200 -95399096 + RSINE1 SINE B4 21 160 -5 5 1128 627 281 25 30 chrX 71251235 71251433 -95398863 + B3A SINE B2 2 198 0 5 1128 1296 14 0 0 chrX 71251445 71251592 -95398704 + B1_Mm SINE Alu 1 147 0 5 1128 243 132 0 0 chrX 71251623 71251661 -95398635 + B3A SINE B2 2 39 -159 5 1128 1194 154 27 0 chrX 71251680 71251900 -95398396 + ORR1B1 LTR MaLR 1 226 -168 5 1128 192 128 0 0 chrX 71254244 71254254 -95396042 + (A)n Simple_repeat Simple_repeat 1 10 0 5 1128 1190 48 7 0 chrX 71254254 71254400 -95395896 + B1_Mm SINE Alu 1 147 0 5 1128 192 128 0 0 chrX 71254400 71254428 -95395868 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1128 1148 109 6 0 chrX 71254620 71254795 -95395501 + ORR1B1 LTR MaLR 211 386 -8 5 1128 374 254 123 0 chrX 71254799 71254913 -95395383 + B3 SINE B2 82 209 -7 5 1128 1087 83 7 0 chrX 71254954 71255098 -95395198 + B1_Mus1 SINE Alu 1 145 -3 5 1128 279 0 0 0 chrX 71255098 71255129 -95395167 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 5 1128 455 241 29 101 chrX 71255186 71255394 -95394902 + L1MC LINE L1 3076 3268 -2878 5 1128 239 324 29 0 chrX 71255397 71255465 -95394831 + AluF_3 SINE Alu 142 211 -100 5 1128 501 201 65 41 chrX 71255688 71255864 -95394432 - B1_Mur2 SINE Alu 0 150 5 5 1128 277 196 35 121 chrX 71255765 71255881 -95394415 - MT2B LTR ERVL -341 260 155 5 1128 1640 47 0 0 chrX 71255882 71256074 -95394222 - B2_Mm1a SINE B2 0 193 2 5 1128 927 131 15 0 chrX 71256272 71256409 -95393887 + B1_Mur3 SINE Alu 1 139 -10 5 1128 192 77 0 0 chrX 71256409 71256435 -95393861 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 1128 439 289 101 14 chrX 71256459 71256666 -95393630 + L1M4 LINE L1 3510 3734 -2412 5 1128 369 0 0 0 chrX 71256765 71256806 -95393490 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1128 534 204 27 96 chrX 71256817 71256963 -95393333 + B1_Mur2 SINE Alu 14 149 0 5 1128 185 65 0 31 chrX 71256963 71256995 -95393301 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 5 1128 869 127 7 2 chrX 71257029 71257193 -95393103 + RLTR12B LTR ERVK 1 163 -405 5 1128 1028 66 58 0 chrX 71257194 71257331 -95392965 - B1_Mm SINE Alu -2 145 1 5 1128 3426 145 123 89 chrX 71257345 71257883 -95392413 - RMER19B LTR ERVK -27 875 264 5 1128 1488 68 5 5 chrX 71257883 71258075 -95392221 + B2_Mm1t SINE B2 2 193 0 5 1128 3426 145 123 89 chrX 71258075 71258382 -95391914 - RMER19B LTR ERVK -639 263 1 5 1128 1653 180 54 31 chrX 71258382 71258768 -95391528 + RLTR12B LTR ERVK 134 528 0 5 1128 248 206 94 2 chrX 71258811 71258923 -95391373 + L1M4 LINE L1 3811 3934 -2212 5 1128 478 166 67 0 chrX 71259113 71259221 -95391075 + B1_Mur2 SINE Alu 1 127 -22 5 1128 273 269 32 21 chrX 71259142 71259237 -95391059 + ID_B1 SINE B4 129 224 0 5 1128 403 275 136 14 chrX 71259238 71259452 -95390844 + L1M4 LINE L1 4160 4399 -1747 5 1128 234 0 0 0 chrX 71260118 71260144 -95390152 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1128 1590 37 21 0 chrX 71260309 71260496 -95389800 - B2_Mm1a SINE B2 -2 191 1 5 1128 320 188 2 0 chrX 71260965 71261032 -95389264 - BC1_Mm scRNA scRNA -15 68 1 5 1128 808 129 82 15 chrX 71261041 71261175 -95389121 - B1_Mus1 SINE Alu -5 143 1 5 1128 660 294 6 12 chrX 71261294 71261466 -95388830 - B3A SINE B2 -25 173 3 5 1128 1203 48 0 26 chrX 71262083 71262234 -95388062 - B1_Mus2 SINE Alu 0 147 1 5 1128 214 336 31 39 chrX 71263792 71263922 -95386374 - L2b LINE L2 -20 3355 3227 5 1128 227 267 154 11 chrX 71264197 71264288 -95386008 - MIR SINE MIR -67 141 38 5 1128 1006 90 8 0 chrX 71264335 71264469 -95385827 - B1_Mus1 SINE Alu -13 135 1 5 1128 468 270 0 0 chrX 71264479 71264579 -95385717 - ID_B1 SINE B4 -9 215 116 5 1128 424 238 0 15 chrX 71264610 71264715 -95385581 - PB1D7 SINE Alu -2 118 15 5 1128 222 388 0 30 chrX 71264631 71264732 -95385564 - ID_B1 SINE B4 -48 176 79 5 1128 296 164 73 15 chrX 71264960 71265028 -95385268 - ID4 SINE ID -11 72 1 5 1128 329 294 33 0 chrX 71266967 71267059 -95383237 + PB1D7 SINE Alu 24 118 -2 5 1128 39 74 0 0 chrX 71269059 71269140 -95381156 + GC_rich Low_complexity Low_complexity 1 81 0 5 1128 657 225 50 14 chrX 71270291 71270431 -95379865 + B1_Mur1 SINE Alu 5 149 0 5 1128 193 29 29 29 chrX 71270435 71270470 -95379826 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1128 618 255 20 7 chrX 71270951 71271097 -95379199 + B1F2 SINE Alu 1 148 -1 5 1128 513 158 221 16 chrX 71271097 71271218 -95379078 + B1F SINE Alu 1 147 -2 5 1128 192 77 0 0 chrX 71275093 71275119 -95375177 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1128 243 61 0 0 chrX 71275247 71275280 -95375016 + (TA)n Simple_repeat Simple_repeat 1 33 0 5 1128 21 0 0 0 chrX 71280633 71280654 -95369642 + AT_rich Low_complexity Low_complexity 1 21 0 5 1128 722 197 15 0 chrX 71283079 71283216 -95367080 - B3 SINE B2 -77 139 1 5 1128 336 64 0 0 chrX 71284365 71284412 -95365884 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 6 1128 341 283 132 33 chrX 71284989 71285201 -95365095 + L1MC4 LINE L1 7579 7811 -231 6 1128 769 189 7 22 chrX 71285360 71285495 -95364801 - B1_Mur2 SINE Alu -6 143 11 6 1128 487 295 136 45 chrX 71285495 71285559 -95364737 - ID_B1 SINE B4 -6 218 2 6 1128 730 192 39 0 chrX 71285720 71285850 -95364446 - B1_Mur2 SINE Alu 0 149 15 6 1128 370 245 106 0 chrX 71286166 71286260 -95364036 - PB1D10 SINE Alu -13 104 1 6 1128 847 245 41 63 chrX 71286283 71286509 -95363787 - B4 SINE B4 0 292 85 6 1128 506 265 0 38 chrX 71286564 71286670 -95363626 + ID_B1 SINE B4 90 191 -33 6 1128 413 263 5 97 chrX 71286670 71286705 -95363591 + PB1D10 SINE Alu 9 149 0 6 1128 822 288 44 11 chrX 71286743 71287013 -95363283 + L1MB4 LINE L1 5592 5870 -310 6 1128 666 55 349 9 chrX 71287013 71287122 -95363174 + B1_Mus1 SINE Alu 2 147 -1 6 1128 406 256 96 79 chrX 71287122 71287300 -95362996 + L1MB4 LINE L1 5948 6128 -46 6 1128 328 279 25 0 chrX 71287308 71287387 -95362909 - ID4_ SINE ID -1 82 2 6 1128 368 300 90 30 chrX 71287397 71287531 -95362765 - B1F1 SINE Alu -5 144 3 6 1128 348 282 11 45 chrX 71287569 71287658 -95362638 - PB1D10 SINE Alu -27 90 5 6 1128 802 264 13 6 chrX 71287585 71287741 -95362555 - ID_B1 SINE B4 -65 159 3 6 1128 347 304 30 7 chrX 71287762 71287869 -95362427 - PB1D10 SINE Alu -13 104 2 6 1128 661 238 88 50 chrX 71288019 71288280 -95362016 - L1MB5 LINE L1 -90 6084 5814 6 1128 572 234 39 15 chrX 71288281 71288411 -95361885 - B1_Mur4 SINE Alu 0 150 18 6 1128 638 204 25 32 chrX 71288601 71288758 -95361538 - L1MB5 LINE L1 -453 5725 5570 6 1128 265 159 0 0 chrX 71288753 71288797 -95361499 + L1MB5 LINE L1 6032 6075 -99 6 1128 330 67 0 0 chrX 71289306 71289351 -95360945 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 6 1128 3955 88 46 25 chrX 71289551 71289722 -95360574 + Lx3B LINE L1 6401 6571 -402 6 1128 1267 55 0 0 chrX 71289722 71289867 -95360429 - B1_Mus2 SINE Alu -2 145 1 6 1128 3955 88 46 25 chrX 71289867 71290255 -95360041 + Lx3B LINE L1 6572 6972 -1 6 1128 656 296 52 0 chrX 71290281 71290453 -95359843 - B3A SINE B2 -16 182 2 6 1128 394 345 14 14 chrX 71290709 71290850 -95359446 - MER58A DNA MER1_type -44 180 40 6 1128 565 246 18 0 chrX 71290853 71290967 -95359329 + PB1D10 SINE Alu 2 117 0 6 1128 218 346 142 28 chrX 71291547 71291794 -95358502 - L2 LINE L2 -2419 1000 726 6 1128 714 132 143 30 chrX 71293252 71293385 -95356911 - B1_Mur2 SINE Alu 0 149 2 6 1128 625 253 38 76 chrX 71293386 71293566 -95356730 - B3A SINE B2 -14 184 12 6 1128 661 186 184 11 chrX 71293566 71293740 -95356556 - ORR1D1 LTR MaLR 0 374 171 6 1128 536 163 61 0 chrX 71293739 71293837 -95356459 + ORR1D1 LTR MaLR 271 374 0 6 1128 635 270 36 0 chrX 71293863 71294000 -95356296 - B1F2 SINE Alu -6 143 2 6 1128 231 108 0 0 chrX 71294018 71294055 -95356241 - B3 SINE B2 -11 205 169 6 1128 873 242 3 80 chrX 71294203 71294418 -95355878 + B3A SINE B2 3 192 -1 6 1128 211 320 180 26 chrX 71295647 71295875 -95354421 - L2a LINE L2 -53 3373 3111 6 1128 1442 74 5 26 chrX 71295881 71296075 -95354221 + B2_Mm1t SINE B2 1 190 -3 6 1128 1267 48 0 0 chrX 71296075 71296221 -95354075 + B1_Mm SINE Alu 1 147 0 6 1128 522 0 0 0 chrX 71296284 71296342 -95353954 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 1128 225 327 89 62 chrX 71296438 71296617 -95353679 - L2a LINE L2 -25 3401 3218 6 1128 296 347 74 58 chrX 71297297 71297554 -95352742 + ORR1E LTR MaLR 79 339 -20 6 1128 684 260 16 85 chrX 71298139 71298198 -95352098 + B3 SINE B2 1 62 -154 6 1128 791 30 0 0 chrX 71298198 71298297 -95351999 + L1Md_T LINE L1 6483 6581 -1 6 1128 684 260 16 85 chrX 71298297 71298426 -95351870 + B3 SINE B2 63 176 -40 6 1128 1903 197 54 32 chrX 71298570 71298942 -95351354 + ORR1C2 LTR MaLR 1 380 -4 6 1128 216 0 0 0 chrX 71299690 71299714 -95350582 + (CAAT)n Simple_repeat Simple_repeat 3 26 0 6 1128 1357 99 16 32 chrX 71299760 71299948 -95350348 - B2_Mm2 SINE B2 -8 187 3 6 1128 2155 153 20 94 chrX 71299990 71300070 -95350226 + MTC LTR MaLR 1 80 -341 6 1128 1279 41 7 0 chrX 71300070 71300216 -95350080 + B1_Mus2 SINE Alu 1 147 0 6 1128 2155 153 20 94 chrX 71300216 71300581 -95349715 + MTC LTR MaLR 81 413 -8 6 1128 519 290 35 15 chrX 71300591 71300794 -95349502 - L1ME2z LINE L1 -227 6217 6011 6 1128 1301 47 0 0 chrX 71300850 71300998 -95349298 - B1_Mus1 SINE Alu 0 148 1 6 1128 293 263 52 13 chrX 71301009 71301086 -95349210 - ID4 SINE ID -2 81 2 6 1128 339 234 240 8 chrX 71301087 71301212 -95349084 - L1ME2z LINE L1 -953 5491 5338 6 1128 803 291 136 32 chrX 71301355 71301928 -95348368 - L1ME2z LINE L1 -3115 3031 2390 6 1128 307 222 139 0 chrX 71301928 71302000 -95348296 - ID4 SINE ID 0 83 2 6 1128 803 291 136 32 chrX 71302000 71302079 -95348217 - L1ME2z LINE L1 -3757 2389 2312 6 1128 502 286 9 0 chrX 71302129 71302234 -95348062 + B3A SINE B2 1 106 -92 6 1128 783 226 14 14 chrX 71302239 71302387 -95347909 - B1_Mur2 SINE Alu 0 149 2 6 1128 323 304 27 0 chrX 71302388 71302500 -95347796 - L1ME2z LINE L1 -4024 2218 2104 6 1128 326 279 93 54 chrX 71302498 71302627 -95347669 - L1ME2z LINE L1 -5371 871 738 6 1128 263 357 20 0 chrX 71302628 71302726 -95347570 + MER58A DNA MER1_type 1 100 -124 6 17 534 267 238 33 chrX 71302965 71303205 -95347091 - B4A SINE B4 -2 290 2 6 1129 324 268 20 20 chrX 71303514 71303613 -95346683 - L1ME2z LINE L1 -5882 254 156 6 1129 574 329 0 7 chrX 71303626 71303766 -95346530 - ID_B1 SINE B4 -2 222 84 6 1129 1277 213 155 103 chrX 71303766 71303884 -95346412 + MT2A LTR ERVL 1 119 -414 6 1129 1742 162 144 8 chrX 71303884 71304245 -95346051 - RMER17C LTR ERVK 0 410 1 6 1129 1277 213 155 103 chrX 71304245 71304591 -95345705 + MT2A LTR ERVL 120 489 -44 6 1129 212 150 0 48 chrX 71304592 71304634 -95345662 + (TATATG)n Simple_repeat Simple_repeat 1 40 0 6 1129 198 0 0 0 chrX 71304708 71304730 -95345566 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1129 2781 142 40 16 chrX 71304730 71305577 -95344719 + MERVL_2A-int LTR ERVL 706 1609 -4152 6 1129 3700 138 16 7 chrX 71305580 71306141 -95344155 - MERVL_2A-int LTR ERVL -1467 4294 3729 6 1129 5111 156 71 7 chrX 71306147 71307033 -95343263 - MERVL_2A-int LTR ERVL -2206 3555 2613 6 1129 2246 155 39 0 chrX 71307037 71307392 -95342904 - MERVL_2A-int LTR ERVL -3327 2434 2066 6 1129 1442 161 48 40 chrX 71307391 71307663 -95342633 - MERVL_2A-int LTR ERVL -3832 1929 1656 6 1129 4823 143 63 4 chrX 71307661 71308913 -95341383 + MERVL_2A-int LTR ERVL 4303 5628 -133 6 1129 280 164 90 0 chrX 71308913 71308980 -95341316 + ORR1A3-int LTR MaLR 567 639 -1324 6 1129 333 164 0 0 chrX 71308980 71309035 -95341261 + MERVL_2A-int LTR ERVL 5706 5760 -1 6 1129 992 216 96 110 chrX 71309044 71309475 -95340821 + MT2B LTR ERVL 1 561 -40 6 1129 615 92 0 0 chrX 71309480 71309567 -95340729 + (TG)n Simple_repeat Simple_repeat 2 88 0 6 1129 658 224 66 15 chrX 71309643 71309779 -95340517 - B1_Mur2 SINE Alu -5 144 2 6 1129 956 216 74 20 chrX 71309904 71310107 -95340189 - B3 SINE B2 -2 214 1 6 1129 356 113 177 0 chrX 71310243 71310305 -95339991 - MT2A LTR ERVL -445 88 16 6 1129 636 291 51 161 chrX 71310377 71310723 -95339573 + L1MC4a LINE L1 6611 7034 -1008 6 1129 1302 48 0 0 chrX 71310723 71310869 -95339427 - B1_Mus2 SINE Alu 0 147 2 6 1129 580 177 52 17 chrX 71310873 71310988 -95339308 - PB1D9 SINE Alu -1 119 1 6 1129 557 291 53 167 chrX 71310988 71311354 -95338942 + L1MC4a LINE L1 7035 7324 -718 6 1129 615 199 43 29 chrX 71311391 71311531 -95338765 + B1_Mur4 SINE Alu 1 142 -8 6 1129 861 208 89 25 chrX 71311561 71311763 -95338533 - B3 SINE B2 0 216 2 6 1129 292 169 33 88 chrX 71311838 71311929 -95338367 + HAL1 LINE L1 1390 1475 -1032 6 1129 455 312 173 8 chrX 71312233 71312482 -95337814 - L2 LINE L2 -693 2726 2437 6 1129 283 250 12 111 chrX 71313030 71313111 -95337185 + 4.5SRNA scRNA scRNA 18 90 -4 6 1129 375 228 87 0 chrX 71313040 71313132 -95337164 + PB1D7 SINE Alu 20 119 -1 6 1129 3107 155 123 17 chrX 71313292 71313869 -95336427 - RMER19B LTR ERVK -264 638 1 6 1129 32 67 0 0 chrX 71313907 71313967 -95336329 + AT_rich Low_complexity Low_complexity 1 60 0 6 1129 758 271 0 24 chrX 71313995 71314165 -95336131 - B3A SINE B2 -32 166 1 6 1129 3220 146 37 14 chrX 71314228 71314742 -95335554 - RLTR11A LTR ERVK -2 526 1 6 1129 647 299 25 25 chrX 71314785 71314943 -95335353 - B3A SINE B2 -39 159 2 6 1129 802 250 32 37 chrX 71315069 71315256 -95335040 - B3A SINE B2 -8 190 5 6 1129 489 235 29 0 chrX 71315260 71315362 -95334934 - B4A SINE B4 -61 231 127 6 1129 666 171 0 0 chrX 71315408 71315531 -95334765 + (TA)n Simple_repeat Simple_repeat 2 124 0 6 1129 304 283 0 0 chrX 71315724 71315784 -95334512 - ID4_ SINE ID -19 64 5 6 1129 315 256 154 35 chrX 71315803 71316061 -95334235 - Charlie4a DNA MER1_type -13 495 156 6 1129 375 257 0 0 chrX 71316060 71316130 -95334166 - ID4 SINE ID -3 80 11 6 1129 267 306 69 0 chrX 71316281 71316353 -95333943 - ID4_ SINE ID -5 78 2 6 1129 605 221 40 54 chrX 71316412 71316560 -95333736 - B1_Mus2 SINE Alu 0 147 2 6 1129 587 194 65 0 chrX 71316663 71316787 -95333509 + ID_B1 SINE B4 90 221 -3 6 1129 832 208 151 6 chrX 71316909 71317088 -95333208 + B3 SINE B2 2 206 -10 6 1129 21 0 0 0 chrX 71317366 71317387 -95332909 + AT_rich Low_complexity Low_complexity 1 21 0 6 1129 859 87 26 0 chrX 71318585 71318700 -95331596 - PB1D9 SINE Alu 0 120 3 6 1129 597 238 15 44 chrX 71318703 71318839 -95331457 + ID_B1 SINE B4 93 224 0 6 1129 509 246 16 33 chrX 71318850 71318972 -95331324 + PB1D7 SINE Alu 1 120 0 6 1129 1198 81 0 13 chrX 71319754 71319904 -95330392 - B1_Mus1 SINE Alu 0 148 1 6 1129 325 250 0 14 chrX 71320559 71320632 -95329664 + L1MC4a LINE L1 5592 5663 -2219 6 1129 2385 174 5 46 chrX 71320663 71321074 -95329222 + ORR1B1 LTR MaLR 1 394 0 6 1129 503 276 129 0 chrX 71321096 71321212 -95329084 - B1_Mur1 SINE Alu -13 136 6 6 1129 306 328 58 29 chrX 71321238 71321376 -95328920 + L1MC4a LINE L1 5727 5868 -2014 6 1129 315 0 0 0 chrX 71321993 71322028 -95328268 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1129 1181 84 150 0 chrX 71322047 71322214 -95328082 + B2_Mm2 SINE B2 2 193 -2 6 1129 789 242 108 41 chrX 71322353 71322547 -95327749 - B3 SINE B2 -9 207 1 7 1129 678 300 43 12 chrX 71322864 71323026 -95327270 + B3A SINE B2 1 167 -31 7 1129 240 35 0 0 chrX 71323071 71323100 -95327196 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1129 302 321 114 0 chrX 71323105 71323245 -95327051 + L1M5 LINE L1 5281 5436 -688 7 1129 916 201 0 26 chrX 71323369 71323522 -95326774 - B1_Mur1 SINE Alu 0 149 1 7 1129 2460 64 10 0 chrX 71323613 71323909 -95326387 + L1_Mus1 LINE L1 6268 6566 -1 7 1129 677 200 200 0 chrX 71326098 71326278 -95324018 - B3 SINE B2 0 216 1 7 1129 334 189 40 13 chrX 71326281 71326356 -95323940 - PB1D10 SINE Alu -2 115 39 7 1129 204 67 0 0 chrX 71326356 71326386 -95323910 + (T)n Simple_repeat Simple_repeat 1 30 0 7 1129 281 259 11 90 chrX 71326850 71326939 -95323357 - ID4 SINE ID 0 83 2 7 1129 659 269 83 16 chrX 71327772 71328037 -95322259 + Lx6 LINE L1 7199 7427 -33 7 1129 232 261 0 0 chrX 71328416 71328481 -95321815 + B4 SINE B4 7 71 -221 7 1129 314 252 4 0 chrX 71328434 71328517 -95321779 + ID4 SINE ID 24 107 -45 7 1129 256 399 92 33 chrX 71329388 71329572 -95320724 + MamSINE1 SINE tRNA 80 274 -16 7 1129 273 57 0 0 chrX 71330887 71330922 -95319374 + (CGG)n Simple_repeat Simple_repeat 3 37 0 7 1129 263 272 272 0 chrX 71332047 71332139 -95318157 - L2a LINE L2 -332 3094 2978 7 1129 308 343 83 12 chrX 71332257 71332425 -95317871 - L2a LINE L2 -677 2742 2563 7 1129 434 205 272 18 chrX 71332492 71332606 -95317690 + B3 SINE B2 74 216 0 7 1129 321 26 0 0 chrX 71332636 71332674 -95317622 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1129 276 98 333 0 chrX 71332712 71332763 -95317533 - B3A SINE B2 -128 70 3 7 1129 657 178 137 27 chrX 71332780 71332999 -95317297 + L1M5 LINE L1 3805 4047 -2099 7 1129 325 265 0 0 chrX 71333277 71333345 -95316951 + ID4 SINE ID 5 72 -11 7 1129 947 250 14 5 chrX 71333654 71333871 -95316425 + ID_B1 SINE B4 4 222 -2 7 1129 21 36 0 0 chrX 71333901 71333929 -95316367 + AT_rich Low_complexity Low_complexity 1 28 0 7 1129 438 240 144 32 chrX 71334033 71334158 -95316138 + RSINE1 SINE B4 4 142 -23 7 1129 695 296 9 155 chrX 71334264 71334321 -95315975 + B4 SINE B4 6 63 -229 7 1129 1168 56 7 0 chrX 71334321 71334465 -95315831 + B1_Mus1 SINE Alu 1 145 -3 7 1129 186 43 0 0 chrX 71334465 71334488 -95315808 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1129 695 296 9 155 chrX 71334488 71334698 -95315598 + B4 SINE B4 64 228 -64 7 1129 1785 251 57 56 chrX 71334698 71335310 -95314986 + RLTR18 LTR ERVK 1 613 -3 7 1129 695 296 9 155 chrX 71335310 71335376 -95314920 + B4 SINE B4 229 290 -2 7 1129 423 0 0 0 chrX 71335419 71335466 -95314830 + (GA)n Simple_repeat Simple_repeat 2 48 0 7 1129 21 0 0 0 chrX 71335946 71335967 -95314329 + AT_rich Low_complexity Low_complexity 1 21 0 7 1129 453 262 0 18 chrX 71335995 71336104 -95314192 + PB1D7 SINE Alu 1 107 -13 7 1129 281 208 28 0 chrX 71336218 71336290 -95314006 + HAL1 LINE L1 998 1071 -1436 7 1129 4793 134 43 21 chrX 71336359 71337175 -95313121 + Lx2B LINE L1 6166 6999 -1 7 1129 434 292 59 23 chrX 71337367 71337588 -95312708 + HAL1 LINE L1 1553 1781 -726 7 1129 294 29 0 0 chrX 71337620 71337655 -95312641 + (TG)n Simple_repeat Simple_repeat 1 35 0 7 1129 693 259 6 36 chrX 71337755 71337834 -95312462 + ID SINE ID 2 75 -149 7 1129 243 325 0 100 chrX 71337834 71337964 -95312332 + PB1D10 SINE Alu 1 117 0 7 1129 452 250 9 36 chrX 71338129 71338241 -95312055 - PB1D7 SINE Alu -10 110 2 7 1129 206 219 0 0 chrX 71338401 71338442 -95311854 + A-rich Low_complexity Low_complexity 3 43 0 7 1129 519 219 118 0 chrX 71339417 71339536 -95310760 + ID_B1 SINE B4 34 166 -58 7 1129 638 241 57 6 chrX 71339554 71339729 -95310567 - L1MC1 LINE L1 -8 6325 6142 7 1129 432 0 0 0 chrX 71339750 71339798 -95310498 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 1129 1024 181 53 10 chrX 71339798 71340005 -95310291 + MTC LTR MaLR 5 220 -201 7 1129 1307 215 3 26 chrX 71340400 71340706 -95309590 + Lx5 LINE L1 864 1162 -5924 7 1129 1122 93 124 0 chrX 71340706 71340867 -95309429 + B2_Mm2 SINE B2 1 181 -14 7 1129 1271 49 15 66 chrX 71340889 71340928 -95309368 + B2_Mm2 SINE B2 2 37 -158 7 1129 3236 28 0 22 chrX 71340928 71341132 -95309164 + L1Md_F3 LINE L1 6188 6388 -196 7 1129 1677 36 0 0 chrX 71341132 71341324 -95308972 + B2_Mm1a SINE B2 1 192 -1 7 1129 3236 28 0 22 chrX 71341324 71341525 -95308771 + L1Md_F3 LINE L1 6389 6584 0 7 1129 1271 49 15 66 chrX 71341525 71341681 -95308615 + B2_Mm2 SINE B2 38 187 -8 7 1129 1233 107 57 0 chrX 71341682 71341952 -95308344 + Lx5 LINE L1 1153 1456 -4421 7 1129 11015 134 42 3 chrX 71341949 71343759 -95306537 + Lx5 LINE L1 4039 5924 -1126 7 1129 1881 137 3 52 chrX 71343759 71343823 -95306473 - ORR1A4 LTR MaLR 0 329 265 7 1129 1942 130 14 69 chrX 71343823 71344171 -95306125 - ORR1A4 LTR MaLR 0 329 1 7 1129 1881 137 3 52 chrX 71344171 71344452 -95305844 - ORR1A4 LTR MaLR -65 264 1 7 1129 10214 146 55 53 chrX 71344452 71346411 -95303885 - ORR1A4-int LTR MaLR 0 1963 1 7 1129 924 131 0 25 chrX 71346411 71346568 -95303728 - ORR1A4 LTR MaLR 0 329 177 7 1129 293 191 84 11 chrX 71346582 71346677 -95303619 + Lx5 LINE L1 6949 7050 0 7 1129 1146 189 18 9 chrX 71346700 71346924 -95303372 + MTC LTR MaLR 196 421 0 7 1129 585 312 0 78 chrX 71346980 71347185 -95303111 - B3A SINE B2 -8 190 2 7 1129 930 231 19 33 chrX 71347226 71347420 -95302876 - B3 SINE B2 -8 208 17 7 1129 4701 143 68 60 chrX 71347420 71348315 -95301981 - RMER19B LTR ERVK 0 902 1 7 1129 930 231 19 33 chrX 71348315 71348330 -95301966 - B3 SINE B2 -200 16 2 7 1129 1615 183 11 70 chrX 71348414 71348808 -95301488 - RMER10B LTR ERVL 0 398 35 7 1129 258 32 0 0 chrX 71348888 71348919 -95301377 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 7 1129 1962 207 27 35 chrX 71348951 71349462 -95300834 + RLTR20A2 LTR ERVK 72 578 0 7 1129 502 193 36 9 chrX 71349462 71349561 -95300735 + MTE2a LTR MaLR 278 379 0 7 1129 923 103 62 0 chrX 71349681 71349827 -95300469 + RMER19B LTR ERVK 736 890 -12 7 1129 908 142 0 14 chrX 71349848 71349991 -95300305 - B1_Mur2 SINE Alu 0 149 9 7 1129 733 290 97 37 chrX 71350003 71350282 -95300014 - L1_Rod LINE L1 -11 5836 5535 7 1129 582 15 0 0 chrX 71350282 71350349 -95299947 + (TC)n Simple_repeat Simple_repeat 2 68 0 7 1129 261 0 0 0 chrX 71350349 71350377 -95299919 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 1129 733 290 97 37 chrX 71350377 71350479 -95299817 - L1_Rod LINE L1 -313 5534 5432 7 1129 2336 99 75 0 chrX 71350539 71350901 -95299395 + MT2B LTR ERVL 213 601 0 7 1129 248 150 0 77 chrX 71350901 71350966 -95299330 - L1M2 LINE L1 -911 5232 5173 7 1129 1208 41 7 0 chrX 71350983 71351130 -95299166 - B1_Mus1 SINE Alu 0 148 1 7 1129 2014 132 60 3 chrX 71351236 71351569 -95298727 + RMER19B LTR ERVK 246 597 -305 7 1129 259 302 0 20 chrX 71351717 71351815 -95298481 + A-rich Low_complexity Low_complexity 4 99 0 7 1129 714 279 5 0 chrX 71351816 71352013 -95298283 - Lx6 LINE L1 -6 7454 7257 7 1129 2239 138 11 32 chrX 71352026 71352288 -95298008 + L1_Mur2 LINE L1 5470 5726 -151 7 1129 1200 41 14 0 chrX 71352288 71352433 -95297863 + B1_Mus1 SINE Alu 1 147 -1 7 1129 2239 138 11 32 chrX 71352433 71352544 -95297752 + L1_Mur2 LINE L1 5727 5835 -42 7 1129 312 233 9 0 chrX 71352656 71352739 -95297557 - B1F1 SINE Alu 0 149 60 7 1129 366 229 240 0 chrX 71352767 71352863 -95297433 + B1_Mur1 SINE Alu 14 132 -17 7 1129 539 269 23 0 chrX 71352913 71353043 -95297253 + B3 SINE B2 2 134 -82 7 1129 796 250 11 6 chrX 71353048 71353229 -95297067 + B3 SINE B2 30 211 -5 7 1129 2184 99 3 3 chrX 71353314 71353627 -95296669 + L1_Mus4 LINE L1 6324 6636 0 7 1129 311 226 21 97 chrX 71353747 71353840 -95296456 + ID_B1 SINE B4 84 169 -55 7 1129 283 232 36 12 chrX 71353842 71353925 -95296371 + GA-rich Low_complexity Low_complexity 4 88 0 7 1129 485 267 25 8 chrX 71354014 71354135 -95296161 - PB1 SINE Alu -4 123 1 7 1129 723 293 24 9 chrX 71354593 71354803 -95295493 + B4 SINE B4 2 214 -78 7 1129 766 229 24 48 chrX 71354955 71355120 -95295176 + RSINE1 SINE B4 5 165 0 7 1129 796 210 33 16 chrX 71355185 71355369 -95294927 + B3 SINE B2 9 195 -21 7 1129 4278 167 63 8 chrX 71355379 71356177 -95294119 - RMER19B LTR ERVK -6 896 55 7 1129 844 241 58 0 chrX 71356255 71356446 -95293850 - B3 SINE B2 -14 202 1 7 1129 993 244 9 5 chrX 71356596 71356814 -95293482 - ID_B1 SINE B4 -5 219 1 7 1129 1025 213 44 19 chrX 71357005 71357211 -95293085 + B3 SINE B2 1 211 -5 7 1129 527 233 111 8 chrX 71357249 71357366 -95292930 + ID_B1 SINE B4 88 216 -8 7 1129 29 70 0 0 chrX 71357408 71357465 -95292831 + AT_rich Low_complexity Low_complexity 1 57 0 7 1129 727 189 224 44 chrX 71357465 71357648 -95292648 - B3 SINE B2 0 216 1 7 1129 282 194 0 0 chrX 71357764 71357826 -95292470 + (TA)n Simple_repeat Simple_repeat 2 63 0 7 1129 393 313 64 45 chrX 71358085 71358242 -95292054 + RSINE1 SINE B4 4 163 -2 7 1129 531 234 37 0 chrX 71358493 71358600 -95291696 - B1_Mur1 SINE Alu -37 112 2 7 1129 798 215 33 9 chrX 71358617 71358828 -95291468 + L1MA4 LINE L1 5717 5932 -368 7 1129 180 0 0 0 chrX 71359008 71359028 -95291268 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 7 1129 1346 137 9 17 chrX 71359031 71359261 -95291035 + Lx LINE L1 6416 6643 -11 7 1129 519 17 0 0 chrX 71359261 71359321 -95290975 + (GAAAA)n Simple_repeat Simple_repeat 2 61 0 7 1129 349 257 0 0 chrX 71359385 71359459 -95290837 - ID4 SINE ID -8 75 2 7 1129 394 290 0 0 chrX 71359725 71359818 -95290478 - PB1D7 SINE Alu -2 118 26 7 1129 1142 157 85 15 chrX 71359951 71360151 -95290145 - B3 SINE B2 0 216 3 7 1129 272 244 211 0 chrX 71360221 71360311 -95289985 - B4A SINE B4 -179 113 5 7 1129 603 193 26 0 chrX 71360338 71360452 -95289844 - B1_Mur2 SINE Alu -13 136 20 7 1129 922 82 7 0 chrX 71360625 71360760 -95289536 + B1_Mus2 SINE Alu 10 145 -2 7 1129 201 94 0 0 chrX 71360770 71360802 -95289494 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 8 1129 2921 71 29 29 chrX 71361382 71361802 -95288494 - Lx LINE L1 -12 6642 6223 8 1129 228 67 0 0 chrX 71361872 71361902 -95288394 + (TTA)n Simple_repeat Simple_repeat 1 30 0 8 1129 2660 255 91 37 chrX 71361904 71362029 -95288267 - Lx4A LINE L1 -5 7053 6949 8 1129 3269 41 21 3 chrX 71362029 71362418 -95287878 - MTA_Mm LTR MaLR 0 396 1 8 1129 2660 255 91 37 chrX 71362418 71363130 -95287166 - Lx4A LINE L1 -110 6948 6171 8 1129 1239 236 33 84 chrX 71363116 71363258 -95287038 + Lx5 LINE L1 5708 5835 -1141 8 1129 3216 146 73 2 chrX 71363258 71363793 -95286503 + Lx LINE L1 6082 6654 0 8 1129 1538 139 70 11 chrX 71363793 71364102 -95286194 + Lx5 LINE L1 5828 6139 -911 8 1129 211 217 48 32 chrX 71364163 71364225 -95286071 - B1F SINE Alu 0 149 87 8 1129 655 266 0 0 chrX 71364234 71364373 -95285923 - B3 SINE B2 -77 139 1 8 1129 225 200 0 0 chrX 71364585 71364630 -95285666 + T-rich Low_complexity Low_complexity 1 45 0 8 1129 435 252 93 80 chrX 71365372 71365609 -95284687 - RMER15 LTR ERVL 0 575 336 8 1129 234 0 0 0 chrX 71365954 71365980 -95284316 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 8 1129 815 243 62 0 chrX 71365981 71366163 -95284133 + MTD LTR MaLR 18 212 -207 8 1129 642 203 8 31 chrX 71366163 71366290 -95284006 + RSINE1 SINE B4 2 125 -40 8 1129 411 21 0 0 chrX 71366292 71366340 -95283956 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 1129 1112 159 47 5 chrX 71366359 71366574 -95283722 + MTD LTR MaLR 196 419 0 8 1129 805 263 47 4 chrX 71366631 71366887 -95283409 - L1MB3 LINE L1 -4 6179 5913 8 1129 258 333 37 0 chrX 71367062 71367143 -95283153 + AluG_3 SINE Alu 138 221 -90 8 1129 1913 171 177 18 chrX 71367216 71367662 -95282634 - Lx9 LINE L1 -106 7538 7022 8 1129 737 172 0 8 chrX 71367662 71367791 -95282505 + B1_Mur1 SINE Alu 9 136 -13 8 1129 207 0 0 0 chrX 71367792 71367815 -95282481 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 1129 219 349 48 0 chrX 71367907 71367970 -95282326 + ID4_ SINE ID 9 74 -9 8 1129 320 219 73 0 chrX 71368080 71368162 -95282134 - L1M5 LINE L1 -2717 3429 3342 8 1129 1111 200 28 19 chrX 71368179 71368393 -95281903 + B3 SINE B2 1 216 0 8 1129 1162 283 97 7 chrX 71369462 71369924 -95280372 - L1MB3 LINE L1 -32 6151 5648 8 1129 632 317 50 0 chrX 71369968 71370129 -95280167 + ID_B1 SINE B4 18 186 -38 8 1129 313 257 10 0 chrX 71370166 71370257 -95280039 - L1MB5 LINE L1 -88 6096 6003 8 1129 448 250 181 14 chrX 71370257 71370395 -95279901 + RSINE1 SINE B4 5 165 0 8 1129 753 222 25 0 chrX 71370419 71370581 -95279715 - B3 SINE B2 0 216 51 8 1129 2230 208 83 8 chrX 71370597 71371078 -95279218 + RMER1C Other Other 826 1342 0 8 1129 353 274 62 0 chrX 71371468 71371614 -95278682 - L1MB5 LINE L1 -160 6014 5860 8 1129 3071 106 2 34 chrX 71373324 71373340 -95276956 - Lx3A LINE L1 -5 6976 6967 8 1129 216 0 0 0 chrX 71373340 71373364 -95276932 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 8 1129 3071 106 2 34 chrX 71373364 71373815 -95276481 - Lx3A LINE L1 -15 6966 6524 8 1129 396 0 0 0 chrX 71373826 71373870 -95276426 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 8 1129 1067 61 24 6 chrX 71373873 71374038 -95276258 + (GAAA)n Simple_repeat Simple_repeat 4 171 0 8 1129 252 0 0 0 chrX 71374038 71374065 -95276231 + (ATAAG)n Simple_repeat Simple_repeat 3 30 0 8 1129 655 227 62 0 chrX 71374110 71374238 -95276058 - RSINE1 SINE B4 -28 137 2 8 1129 29 0 0 0 chrX 71374285 71374314 -95275982 + AT_rich Low_complexity Low_complexity 1 29 0 8 1129 526 252 84 0 chrX 71374478 71374609 -95275687 + ID_B1 SINE B4 82 223 -1 8 1129 552 254 0 0 chrX 71374616 71374726 -95275570 + B1_Mur1 SINE Alu 14 123 -26 8 1129 260 286 92 35 chrX 71374826 71374913 -95275383 - RSINE1 SINE B4 -25 140 49 8 1129 510 235 78 35 chrX 71374963 71375104 -95275192 - B1F1 SINE Alu 0 149 3 8 1129 512 228 93 22 chrX 71375981 71376120 -95274176 + B3A SINE B2 2 150 -48 8 1129 31 0 0 0 chrX 71376304 71376335 -95273961 + AT_rich Low_complexity Low_complexity 1 31 0 8 1129 219 103 0 0 chrX 71376459 71376498 -95273798 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 8 1129 484 209 100 0 chrX 71376601 71376711 -95273585 + B1F2 SINE Alu 21 141 -8 8 1129 710 220 7 0 chrX 71376756 71376897 -95273399 + B1_Mur2 SINE Alu 1 142 -7 8 1129 36 23 0 0 chrX 71376897 71376940 -95273356 + AT_rich Low_complexity Low_complexity 1 43 0 8 1129 283 82 68 0 chrX 71377677 71377750 -95272546 + T-rich Low_complexity Low_complexity 4 81 0 8 1129 744 257 0 0 chrX 71378880 71379020 -95271276 + RSINE1 SINE B4 3 142 -23 8 1129 261 0 0 0 chrX 71379021 71379050 -95271246 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 1129 290 269 38 9 chrX 71379862 71379967 -95270329 - L1MB8 LINE L1 -63 6115 6008 8 1129 4081 82 3 24 chrX 71380097 71380684 -95269612 - RLTR19-int LTR ERVK -4133 2004 1430 8 1129 406 330 6 0 chrX 71380733 71380912 -95269384 + (CCA)n Simple_repeat Simple_repeat 1 180 0 8 1129 23 0 0 0 chrX 71381522 71381545 -95268751 + GC_rich Low_complexity Low_complexity 1 23 0 8 1129 3117 108 28 9 chrX 71381701 71382160 -95268136 - Lx2A LINE L1 0 7008 6541 8 1129 503 63 0 16 chrX 71382160 71382224 -95268072 + Lx2A LINE L1 6429 6491 -517 8 1129 443 189 57 95 chrX 71382225 71382383 -95267913 + MT2B LTR ERVL 106 257 -344 8 1129 860 119 22 0 chrX 71382291 71382425 -95267871 + B1_Mus2 SINE Alu 11 147 0 8 1129 230 0 33 0 chrX 71382425 71382455 -95267841 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 8 1129 1022 209 0 93 chrX 71382503 71382740 -95267556 + B3 SINE B2 1 215 -1 8 1129 321 253 141 31 chrX 71382849 71383012 -95267284 - Charlie4a DNA MER1_type -289 219 39 8 1129 249 263 202 0 chrX 71384782 71384881 -95265415 + L1MB5 LINE L1 6047 6165 -9 8 1129 242 256 221 0 chrX 71384942 71385028 -95265268 + L1MB5 LINE L1 6037 6141 -33 8 1129 582 233 119 8 chrX 71385449 71385583 -95264713 - B1_Mur1 SINE Alu 0 149 1 8 1129 1484 132 153 41 chrX 71385604 71385944 -95264352 - ORR1C2 LTR MaLR -1 383 6 8 1129 704 207 122 26 chrX 71385992 71386181 -95264115 + ID_B1 SINE B4 2 208 -16 8 1129 696 262 22 102 chrX 71386350 71386686 -95263610 - Lx7 LINE L1 -284 7412 7106 8 1129 366 268 21 0 chrX 71386701 71386798 -95263498 + Lx7 LINE L1 6973 7071 -625 8 1129 2017 174 13 11 chrX 71386987 71387359 -95262937 - ORR1D1 LTR MaLR -1 373 1 8 1129 369 0 0 0 chrX 71387693 71387734 -95262562 + (TC)n Simple_repeat Simple_repeat 2 42 0 8 1129 1224 41 7 0 chrX 71387735 71387880 -95262416 - B1_Mus2 SINE Alu 0 147 2 8 1129 186 71 0 0 chrX 71387882 71387910 -95262386 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 8 1129 237 33 0 0 chrX 71389423 71389453 -95260843 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 8 1129 253 279 0 0 chrX 71389869 71389937 -95260359 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 8 1129 227 211 19 0 chrX 71390373 71390425 -95259871 - MLT1C LTR MaLR -17 610 558 8 1129 254 322 0 33 chrX 71390424 71390514 -95259782 + BC1_Mm scRNA scRNA 14 100 -52 8 1129 252 231 135 59 chrX 71390554 71390653 -95259643 - MLT1C LTR MaLR -59 408 246 8 1129 2791 147 107 16 chrX 71390721 71391205 -95259091 - RLTR11A LTR ERVK 0 528 1 8 1129 6699 165 46 26 chrX 71391206 71391548 -95258748 - MYSERV16_I-int LTR ERVK -1 2325 1980 8 1129 1930 36 0 5 chrX 71391548 71391801 -95258495 + L1_Mus1 LINE L1 6339 6567 0 8 1129 6699 165 46 26 chrX 71391801 71392758 -95257538 - MYSERV16_I-int LTR ERVK -347 1979 1000 8 1129 250 197 53 53 chrX 71392758 71392833 -95257463 - RMER4A LTR ERVK -84 382 308 8 1129 743 236 6 11 chrX 71392837 71393014 -95257282 - MYSERV16_I-int LTR ERVK -389 5391 5246 8 1129 325 305 44 44 chrX 71393129 71393311 -95256985 - L1M5 LINE L1 -1279 4867 4686 8 1129 6881 77 15 7 chrX 71393313 71394193 -95256103 - Lx3_Mus LINE L1 -8 7001 6115 8 1129 3436 60 7 2 chrX 71394193 71394638 -95255658 + L1_Mur1 LINE L1 4014 4461 -1425 8 1129 3917 64 9 9 chrX 71394630 71395169 -95255127 - L1_Mur1 LINE L1 -2314 3572 3034 8 1129 2407 100 41 0 chrX 71395169 71395510 -95254786 - MYSERV16_I-int LTR ERVK -2507 3273 2919 8 1129 376 289 83 12 chrX 71395511 71395679 -95254617 - MLT1C LTR MaLR -279 188 9 8 1129 804 238 14 0 chrX 71396924 71397067 -95253229 - B1_Mur1 SINE Alu -1 148 4 8 1129 432 37 0 0 chrX 71397865 71397919 -95252377 + (CA)n Simple_repeat Simple_repeat 2 55 0 8 1129 192 77 0 0 chrX 71398721 71398747 -95251549 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 8 1129 704 204 129 6 chrX 71399503 71399666 -95250630 + B3 SINE B2 34 216 0 8 1129 855 283 9 39 chrX 71399669 71399901 -95250395 + Lx9 LINE L1 6967 7191 -453 8 1129 267 234 0 0 chrX 71399901 71399978 -95250318 + GA-rich Low_complexity Low_complexity 1 77 0 8 1129 706 31 31 0 chrX 71400053 71400149 -95250147 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 8 1129 1214 51 0 0 chrX 71400149 71400286 -95250010 - B1_Mm SINE Alu -10 137 1 8 1129 23 0 0 0 chrX 71400308 71400331 -95249965 + AT_rich Low_complexity Low_complexity 1 23 0 8 1129 21 36 0 0 chrX 71400443 71400471 -95249825 + AT_rich Low_complexity Low_complexity 1 28 0 8 1129 296 138 52 0 chrX 71401119 71401177 -95249119 + B1_Mur3 SINE Alu 89 149 0 8 1129 327 253 0 0 chrX 71401258 71401333 -95248963 + RLTR24 LTR ERV1 1 75 -454 8 1129 415 258 173 68 chrX 71401484 71401675 -95248621 + RLTR24 LTR ERV1 319 529 0 8 1129 254 255 95 86 chrX 71401680 71401796 -95248500 + L1MEf LINE L1 1369 1485 -4715 8 1129 633 177 71 0 chrX 71401807 71401920 -95248376 + RSINE1 SINE B4 14 134 -31 8 1129 26 0 0 0 chrX 71401935 71401961 -95248335 + AT_rich Low_complexity Low_complexity 1 26 0 8 1129 823 219 98 36 chrX 71401966 71402160 -95248136 + MTE2b LTR MaLR 168 373 -6 8 1129 371 294 0 0 chrX 71402172 71402257 -95248039 + RMER15-int LTR ERVL 1964 2048 -2951 8 1129 1230 146 0 70 chrX 71402723 71402779 -95247517 - Lx2B LINE L1 0 7000 6954 8 1129 2909 69 71 8 chrX 71402779 71403174 -95247122 + BGLII LTR ERVK 2 421 0 8 1129 1230 146 0 70 chrX 71403174 71403346 -95246950 - Lx2B LINE L1 -47 6953 6788 8 1129 192 97 0 0 chrX 71403396 71403427 -95246869 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 1129 399 222 158 75 chrX 71403766 71403912 -95246384 - RSINE1 SINE B4 -6 159 2 9 1129 1669 178 17 17 chrX 71403913 71404204 -95246092 + RLTR33 LTR ERVK 388 678 0 9 1129 763 113 0 0 chrX 71404244 71404350 -95245946 + B2_Mm2 SINE B2 2 107 -88 9 1129 261 0 0 0 chrX 71404452 71404481 -95245815 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 1129 479 265 89 30 chrX 71404486 71404688 -95245608 + L1M2 LINE L1 4888 5101 -1042 9 1129 3236 196 156 22 chrX 71404688 71405540 -95244756 + RLTR25B LTR ERVK 3 968 -60 9 1129 280 218 0 0 chrX 71405698 71405753 -95244543 - PB1D10 SINE Alu -1 116 62 9 1129 506 296 45 14 chrX 71407546 71407769 -95242527 + L1ME3B LINE L1 5792 6021 -219 9 1129 4501 171 47 68 chrX 71407771 71408678 -95241618 + RMER19B LTR ERVK 3 890 -12 9 1129 3992 43 0 9 chrX 71408841 71409307 -95240989 + L1Md_F2 LINE L1 6109 6570 -12 9 1129 864 118 0 9 chrX 71409379 71409520 -95240776 + L1_Mur1 LINE L1 4884 5055 -831 9 1129 8128 101 9 15 chrX 71409527 71411171 -95239125 + L1Md_F LINE L1 744 2331 -3552 9 1129 2628 88 76 14 chrX 71411171 71411540 -95238756 + Lx4A LINE L1 6667 7058 0 9 1129 8128 76 12 3 chrX 71411540 71411568 -95238728 + L1Md_F LINE L1 2332 2360 -3523 9 1129 257 207 23 58 chrX 71411597 71411684 -95238612 - Lx4B LINE L1 -2 7056 6973 9 1129 272 326 128 13 chrX 71411752 71412050 -95238246 + L1MEg LINE L1 832 1163 -4921 9 1129 9172 4 0 0 chrX 71412152 71413148 -95237148 - L1Md_A LINE L1 0 6582 5587 9 1129 473 241 82 8 chrX 71413221 71413355 -95236941 + HAL1 LINE L1 1451 1594 -913 9 1129 288 333 0 0 chrX 71413382 71413481 -95236815 + T-rich Low_complexity Low_complexity 1 99 0 9 1129 238 156 22 0 chrX 71413545 71413590 -95236706 + HAL1b LINE L1 1185 1230 -779 9 1129 3143 80 21 17 chrX 71413634 71414054 -95236242 - Lx3_Mus LINE L1 0 7009 6588 9 1129 1676 54 40 5 chrX 71414054 71414277 -95236019 + L1_Mur1 LINE L1 4844 5074 -812 9 1129 375 23 0 0 chrX 71414418 71414462 -95235834 + (GA)n Simple_repeat Simple_repeat 1 44 0 9 1129 345 221 54 16 chrX 71414501 71414599 -95235697 + B4A SINE B4 108 205 -87 9 1129 255 170 0 0 chrX 71414606 71414653 -95235643 + GA-rich Low_complexity Low_complexity 2 48 0 9 1129 1193 101 6 0 chrX 71414653 71414832 -95235464 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 9 1129 998 238 28 19 chrX 71414840 71415054 -95235242 + B3 SINE B2 1 216 0 9 1129 1281 61 0 0 chrX 71415191 71415338 -95234958 + B1_Mus2 SINE Alu 1 147 0 9 1129 592 292 39 45 chrX 71415433 71415788 -95234508 + HAL1 LINE L1 2031 2383 -124 9 1129 1135 96 7 0 chrX 71415788 71415934 -95234362 + B1_Mus1 SINE Alu 2 148 0 9 1129 21 0 0 0 chrX 71417372 71417393 -95232903 + AT_rich Low_complexity Low_complexity 1 21 0 9 1129 1823 229 64 14 chrX 71417395 71417826 -95232470 + RMER1B Other Other 356 726 -340 9 1129 551 250 8 8 chrX 71417826 71417943 -95232353 + RSINE1 SINE B4 6 122 -43 9 1129 475 278 106 40 chrX 71418018 71418217 -95232079 + ID_B1 SINE B4 4 215 -9 9 1129 744 193 49 14 chrX 71418386 71418549 -95231747 + B3 SINE B2 9 170 -25 9 1129 472 307 14 28 chrX 71418588 71418729 -95231567 + RSINE1 SINE B4 3 141 -24 9 1129 210 118 0 0 chrX 71418760 71418794 -95231502 + (CA)n Simple_repeat Simple_repeat 1 34 0 9 1129 34 0 0 0 chrX 71418818 71418852 -95231444 + AT_rich Low_complexity Low_complexity 1 34 0 9 1129 212 290 188 31 chrX 71418852 71418948 -95231348 + B4 SINE B4 70 180 -112 9 1129 325 294 94 38 chrX 71418873 71418979 -95231317 + PB1D10 SINE Alu 6 117 0 9 1129 621 220 103 28 chrX 71419016 71419161 -95231135 + RSINE1 SINE B4 3 158 -7 9 1129 477 0 0 0 chrX 71419379 71419432 -95230864 + (CA)n Simple_repeat Simple_repeat 2 54 0 9 1129 428 276 84 19 chrX 71419459 71419566 -95230730 + PB1D10 SINE Alu 2 115 -2 9 1129 1325 187 5 0 chrX 71419834 71420043 -95230253 + B3 SINE B2 2 211 -5 9 1129 21 89 0 0 chrX 71420044 71420100 -95230196 + AT_rich Low_complexity Low_complexity 1 56 0 9 1129 21 36 0 0 chrX 71420238 71420266 -95230030 + AT_rich Low_complexity Low_complexity 1 28 0 9 1129 1159 86 0 0 chrX 71420267 71420406 -95229890 + B1_Mus1 SINE Alu 1 139 -9 9 1129 1057 83 38 19 chrX 71420448 71420608 -95229688 + B2_Mm2 SINE B2 27 189 -6 9 1129 223 189 0 0 chrX 71420825 71420862 -95229434 + B3A SINE B2 1 37 -161 9 1129 1176 84 0 7 chrX 71420863 71421007 -95229289 + B1_Mus2 SINE Alu 2 144 -3 9 1129 233 29 29 0 chrX 71421007 71421041 -95229255 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 9 1129 1052 198 11 0 chrX 71421065 71421252 -95229044 + B3 SINE B2 27 215 -1 9 1129 27 0 0 0 chrX 71421330 71421357 -95228939 + AT_rich Low_complexity Low_complexity 1 27 0 9 1129 582 241 0 0 chrX 71423477 71423585 -95226711 - B1_Mur2 SINE Alu -41 108 1 9 1129 432 252 105 64 chrX 71423607 71423874 -95226422 - L1M4 LINE L1 -2671 3475 3198 9 1129 270 211 37 62 chrX 71423880 71423921 -95226375 + ID4 SINE ID 5 45 -38 9 1129 2730 100 146 49 chrX 71423921 71424394 -95225902 + MURVY-LTR LTR ERV1 1 519 0 9 1129 270 211 37 62 chrX 71424394 71424433 -95225863 + ID4 SINE ID 46 82 -1 9 1129 350 217 136 150 chrX 71424438 71424607 -95225689 - L1M4 LINE L1 -2948 3198 3030 9 1129 983 181 0 0 chrX 71424607 71424751 -95225545 + B1_Mur4 SINE Alu 1 144 -6 9 1129 1704 16 27 0 chrX 71424757 71424944 -95225352 + B2_Mm1a SINE B2 2 193 0 9 1129 350 217 136 150 chrX 71424944 71425201 -95225095 - L1M4 LINE L1 -3117 3029 2771 9 1129 395 296 0 0 chrX 71425215 71425296 -95225000 + ID4_ SINE ID 1 81 -2 9 1129 1128 110 14 0 chrX 71425464 71425609 -95224687 - B1_Mus1 SINE Alu 0 148 2 9 1129 239 240 40 0 chrX 71425727 71425777 -95224519 + B1_Mus2 SINE Alu 59 110 -37 9 1129 189 0 0 0 chrX 71425853 71425874 -95224422 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 9 1129 1306 77 53 27 chrX 71426046 71426233 -95224063 - B2_Mm1t SINE B2 0 193 2 9 1129 259 284 0 3 chrX 71426255 71426314 -95223982 - B1F SINE Alu -87 62 6 9 1129 277 197 105 0 chrX 71426322 71426398 -95223898 - L1M2 LINE L1 -859 5432 5349 9 1129 281 208 27 14 chrX 71426382 71426455 -95223841 - L1_Rod LINE L1 -621 5226 5153 9 1129 942 206 151 11 chrX 71426512 71426698 -95223598 + B3 SINE B2 1 212 -4 9 1129 251 191 33 22 chrX 71427264 71427355 -95222941 + (GTTTG)n Simple_repeat Simple_repeat 2 93 0 9 1129 491 295 7 44 chrX 71427355 71427490 -95222806 - ID_B1 SINE B4 0 224 95 9 1129 269 62 62 15 chrX 71427565 71427630 -95222666 + (TTTTG)n Simple_repeat Simple_repeat 3 70 0 9 1129 577 281 44 0 chrX 71428149 71428284 -95222012 + B1F SINE Alu 1 141 -8 9 1129 1509 68 11 0 chrX 71428309 71428499 -95221797 + B2_Mm1a SINE B2 1 192 -1 9 1129 517 250 17 17 chrX 71428718 71428836 -95221460 - MTD LTR MaLR -14 407 290 9 1129 21 0 0 0 chrX 71428888 71428909 -95221387 + AT_rich Low_complexity Low_complexity 1 21 0 9 1129 738 82 73 15 chrX 71428917 71429054 -95221242 - RMER17B LTR ERVK -502 456 312 9 1129 7512 118 53 14 chrX 71429074 71429935 -95220361 - Lx3B LINE L1 -4 6969 6064 9 1129 825 11 0 0 chrX 71429935 71430029 -95220267 + (TTCCC)n Simple_repeat Simple_repeat 5 98 0 9 1129 7512 118 53 14 chrX 71430029 71430309 -95219987 - Lx3B LINE L1 -910 6063 5784 9 1129 6150 83 75 22 chrX 71430311 71431207 -95219089 - L1Md_F2 LINE L1 -12 6570 5628 9 1129 3220 76 5 0 chrX 71431205 71431625 -95218671 + L1_Mur1 LINE L1 5187 5608 -278 9 1129 577 307 18 85 chrX 71431625 71431849 -95218447 - MTD LTR MaLR -210 209 1 9 1129 1216 236 142 36 chrX 71431853 71432296 -95218000 - MTD-int LTR MaLR -4 1254 765 9 1129 7627 125 24 17 chrX 71432558 71433407 -95216889 - Lx2 LINE L1 -2 6995 6143 9 1129 3174 80 5 10 chrX 71433407 71433809 -95216487 - MTB LTR MaLR 0 400 1 9 1129 7627 125 24 17 chrX 71433809 71434135 -95216161 - Lx2 LINE L1 -855 6142 5812 9 141 9424 71 36 7 chrX 71434135 71436144 -95214152 - L1VL4 LINE L1 -1317 2242 185 9 1130 4215 76 0 0 chrX 71437325 71437866 -95212430 - L1Md_T LINE L1 0 6582 6069 9 1130 722 199 22 30 chrX 71437899 71438064 -95212232 + B3 SINE B2 14 188 -10 9 1130 1308 35 0 0 chrX 71438387 71438530 -95211766 + B1_Mus1 SINE Alu 1 143 -5 9 1130 337 282 27 0 chrX 71438677 71438787 -95211509 + CT-rich Low_complexity Low_complexity 4 116 0 9 1130 183 129 0 0 chrX 71439343 71439374 -95210922 + (T)n Simple_repeat Simple_repeat 1 31 0 9 1130 1317 54 0 0 chrX 71439377 71439524 -95210772 - B1_Mus2 SINE Alu 0 147 1 9 1130 27 29 0 0 chrX 71439869 71439903 -95210393 + AT_rich Low_complexity Low_complexity 1 34 0 9 1130 9619 80 33 4 chrX 71440045 71441491 -95208805 - Lx3A LINE L1 -2 6979 5484 9 1130 21 57 0 0 chrX 71441651 71441686 -95208610 + AT_rich Low_complexity Low_complexity 1 35 0 9 1130 288 0 0 0 chrX 71442732 71442764 -95207532 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 9 1130 298 244 169 12 chrX 71442764 71442847 -95207449 - PB1D10 SINE Alu -12 105 10 9 1130 774 62 0 0 chrX 71443437 71443534 -95206762 - Lx3_Mus LINE L1 -552 6457 6361 9 1130 460 225 0 0 chrX 71443656 71443736 -95206560 - ID4 SINE ID 0 83 4 9 1130 279 322 38 61 chrX 71443858 71443899 -95206397 - B1F2 SINE Alu -20 129 1 9 1130 374 300 0 11 chrX 71443899 71443990 -95206306 - ID_B1 SINE B4 -53 171 82 9 1130 370 294 120 22 chrX 71443988 71444172 -95206124 - Charlie2b DNA MER1_type -2456 326 125 9 1130 411 238 0 0 chrX 71444385 71444465 -95205831 + B3A SINE B2 91 170 -28 9 1130 1915 170 112 12 chrX 71444676 71445130 -95205166 - BGLII_B LTR ERVK -5 436 1 9 1130 791 29 19 0 chrX 71446649 71446754 -95203542 + (TAGA)n Simple_repeat Simple_repeat 4 110 0 9 1130 306 0 0 0 chrX 71448073 71448107 -95202189 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 9 1130 843 262 87 0 chrX 71448136 71448342 -95201954 + ID_B1 SINE B4 1 224 0 1 1130 499 262 30 96 chrX 71448418 71448553 -95201743 + B4A SINE B4 2 127 -165 1 1130 2166 172 58 25 chrX 71448881 71449281 -95201015 + MTC LTR MaLR 1 413 -8 1 1130 653 200 154 0 chrX 71449370 71449500 -95200796 + B1_Mur4 SINE Alu 1 150 0 1 1130 2208 178 179 14 chrX 71449582 71449702 -95200594 - Lx9 LINE L1 0 7644 7522 1 1130 288 0 0 0 chrX 71449702 71449734 -95200562 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1130 2208 178 179 14 chrX 71449734 71450167 -95200129 - Lx9 LINE L1 -123 7521 7001 1 1130 417 263 25 42 chrX 71450452 71450571 -95199725 - PB1D10 SINE Alu 0 117 1 1 1130 251 261 116 0 chrX 71450607 71450676 -95199620 - ID4_ SINE ID -2 81 5 1 1130 468 91 0 0 chrX 71451424 71451490 -95198806 + (TTTC)n Simple_repeat Simple_repeat 1 66 0 1 1130 1161 82 0 7 chrX 71451491 71451638 -95198658 - B1_Mus1 SINE Alu -1 147 2 1 1130 519 211 92 15 chrX 71452166 71452296 -95198000 + B1_Mur1 SINE Alu 3 142 -7 1 1130 294 365 28 49 chrX 71452601 71452745 -95197551 - MER68 LTR ERVL -291 272 132 1 1130 1369 94 10 10 chrX 71454282 71454475 -95195821 + B2_Mm1t SINE B2 1 193 0 1 1130 450 278 164 23 chrX 71454488 71454665 -95195631 + B3 SINE B2 2 203 -13 1 1130 656 197 68 0 chrX 71454701 71454833 -95195463 + B1F2 SINE Alu 3 143 -6 1 1130 570 168 158 8 chrX 71454836 71454956 -95195340 + B1_Mur4 SINE Alu 2 139 -11 1 1130 424 234 136 27 chrX 71455016 71455126 -95195170 + ID_B1 SINE B4 95 216 -8 1 1130 271 218 108 34 chrX 71455257 71455393 -95194903 - L1MB5 LINE L1 -167 6007 5860 1 1130 391 252 29 48 chrX 71455453 71455557 -95194739 - B1_Mur1 SINE Alu -22 127 26 1 1130 663 222 0 16 chrX 71455471 71455599 -95194697 - B4 SINE B4 -96 196 71 1 1130 4228 117 47 0 chrX 71455866 71456531 -95193765 - Lx2B LINE L1 -33 6967 6272 1 1130 3294 111 19 2 chrX 71456529 71457061 -95193235 + Lx2B LINE L1 4453 4993 -884 1 1130 4730 181 33 30 chrX 71457061 71457961 -95192335 - RMER13B LTR ERVK 0 908 6 1 1130 4907 126 11 35 chrX 71457971 71459271 -95191025 + Lx2B LINE L1 4995 6277 -723 1 1130 225 321 0 0 chrX 71459895 71459948 -95190348 + PB1D10 SINE Alu 26 78 -39 1 1130 619 265 44 70 chrX 71459971 71460198 -95190098 - ID_B1 SINE B4 -2 222 2 1 1130 1134 159 179 9 chrX 71460866 71461095 -95189201 - RMER4B LTR ERVK 0 585 318 1 1130 343 70 0 0 chrX 71461268 71461311 -95188985 + PB1D9 SINE Alu 1 43 -77 1 1130 757 241 0 0 chrX 71461347 71461488 -95188808 - B1_Mur1 SINE Alu -8 141 1 1 1130 857 178 183 0 chrX 71461564 71461744 -95188552 + B3 SINE B2 4 216 0 1 1130 259 127 0 98 chrX 71461764 71461825 -95188471 - B3 SINE B2 0 216 162 1 1130 419 299 169 39 chrX 71461872 71462126 -95188170 + RMER21A LTR ERV1 403 689 -258 1 1130 544 222 16 41 chrX 71462183 71462305 -95187991 - B3A SINE B2 -78 120 2 1 1130 464 270 122 0 chrX 71462311 71462426 -95187870 - ID_B1 SINE B4 -2 222 94 1 1130 1234 61 0 0 chrX 71462983 71463130 -95187166 + B1_Mus2 SINE Alu 1 147 0 1 1130 439 259 0 12 chrX 71463143 71463225 -95187071 + ID SINE ID 2 82 -142 1 1130 400 258 58 50 chrX 71463227 71463366 -95186930 + B1F1 SINE Alu 5 144 -5 1 1130 286 311 0 91 chrX 71463366 71463380 -95186916 + BC1_Mm scRNA scRNA 82 91 -61 1 1130 399 354 73 53 chrX 71463399 71463739 -95186557 + L1MD1 LINE L1 5772 6118 -241 1 1130 211 296 12 58 chrX 71463850 71463936 -95186360 - ID4_ SINE ID 0 83 2 1 1130 409 194 178 0 chrX 71464197 71464298 -95185998 - PB1D9 SINE Alu 0 120 3 1 1130 292 241 78 61 chrX 71464298 71464354 -95185942 - B4 SINE B4 -206 86 29 1 1130 1108 257 122 90 chrX 71465836 71465894 -95184402 + RMER4B LTR ERVK 1 65 -520 1 1130 313 57 0 0 chrX 71465894 71465947 -95184349 - Lx LINE L1 -2 6652 6600 1 1130 1108 257 122 90 chrX 71465947 71466164 -95184132 + RMER4B LTR ERVK 66 263 -322 1 1130 549 0 0 0 chrX 71466164 71466225 -95184071 + (CTG)n Simple_repeat Simple_repeat 2 62 0 1 1130 1108 224 122 68 chrX 71466225 71466486 -95183810 + RMER4B LTR ERVK 264 525 -60 1 1130 1011 175 70 35 chrX 71466866 71467067 -95183229 + B3 SINE B2 1 208 -8 1 1130 832 176 42 0 chrX 71468357 71468499 -95181797 + B1_Mur1 SINE Alu 1 148 -1 1 1130 1604 133 77 28 chrX 71469527 71469814 -95180482 + RLTR11A LTR ERVK 228 528 0 1 1130 557 168 178 0 chrX 71469814 71469913 -95180383 - B3 SINE B2 -96 120 4 1 1130 416 311 59 22 chrX 71473922 71474057 -95176239 - ID_B1 SINE B4 -5 219 80 1 1130 770 210 187 5 chrX 71474908 71475095 -95175201 - ID_B1 SINE B4 -2 222 2 1 1130 260 374 53 32 chrX 71477169 71477357 -95172939 + L2 LINE L2 2566 2757 -662 1 1130 193 264 19 0 chrX 71478043 71478096 -95172200 - MIRm SINE MIR -108 168 115 1 1130 253 135 0 0 chrX 71481686 71481723 -95168573 + B1_Mus2 SINE Alu 79 115 -32 1 1130 1184 101 0 6 chrX 71481727 71481906 -95168390 + (GGGA)n Simple_repeat Simple_repeat 1 178 0 1 1130 696 83 0 0 chrX 71481949 71482045 -95168251 + (GGGGA)n Simple_repeat Simple_repeat 2 97 0 1 1130 1203 230 174 35 chrX 71483654 71483959 -95166337 + L1MB8 LINE L1 5552 5894 -284 1 1130 838 161 14 27 chrX 71483959 71484092 -95166204 + B1_Mur2 SINE Alu 4 138 -11 1 1130 234 0 0 0 chrX 71484092 71484118 -95166178 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1130 838 161 14 27 chrX 71484118 71484131 -95166165 + B1_Mur2 SINE Alu 139 148 -1 1 1130 1203 230 174 35 chrX 71484131 71484152 -95166144 + L1MB8 LINE L1 5895 5911 -267 1 1130 333 0 0 0 chrX 71484152 71484189 -95166107 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1130 1203 230 174 35 chrX 71484189 71484407 -95165889 + L1MB8 LINE L1 5912 6172 -6 1 1130 222 37 0 0 chrX 71490863 71490890 -95159406 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1 1130 243 0 0 0 chrX 71492706 71492733 -95157563 + (CCTG)n Simple_repeat Simple_repeat 3 29 0 1 1130 931 157 221 0 chrX 71493247 71493419 -95156877 + B3 SINE B2 1 210 -6 1 1130 342 0 0 0 chrX 71493420 71493458 -95156838 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 1 1130 27 29 0 0 chrX 71495206 71495240 -95155056 + GC_rich Low_complexity Low_complexity 1 34 0 1 1130 21 0 0 0 chrX 71495338 71495359 -95154937 + GC_rich Low_complexity Low_complexity 1 21 0 1 1130 245 293 53 0 chrX 71495873 71495948 -95154348 + L2c LINE L2 3071 3149 -238 1 1130 231 36 0 0 chrX 71496103 71496131 -95154165 + (GGAA)n Simple_repeat Simple_repeat 1 28 0 1 1130 949 113 14 14 chrX 71496143 71496286 -95154010 + B1_Mur4 SINE Alu 6 148 -2 1 1130 440 264 23 60 chrX 71497030 71497163 -95153133 - B1F SINE Alu 0 149 22 1 1130 653 103 8 0 chrX 71497803 71497920 -95152376 + (TC)n Simple_repeat Simple_repeat 1 118 0 1 1130 3810 36 7 0 chrX 71498041 71498490 -95151806 - L1Md_F3 LINE L1 0 6584 6133 1 1130 607 116 385 6 chrX 71498655 71498811 -95151485 + URR1B DNA MER1_type 11 225 0 1 1130 995 196 44 5 chrX 71498999 71499204 -95151092 + URR1B DNA MER1_type 7 219 -6 1 1130 477 245 86 29 chrX 71499017 71499227 -95151069 - CYRA11_Mm Unknown Y-chromosome -242 375 154 1 1130 243 0 0 0 chrX 71499370 71499397 -95150899 + (CAGG)n Simple_repeat Simple_repeat 3 29 0 1 1130 1256 135 43 10 chrX 71501544 71501753 -95148543 - RMER4B LTR ERVK -369 216 1 1 1130 739 283 23 17 chrX 71501753 71501929 -95148367 - B3A SINE B2 -20 178 2 2 1130 482 257 59 55 chrX 71503635 71503837 -95146459 + RLTR15 LTR ERVK 76 278 -81 3 1130 240 213 141 88 chrX 71503954 71504000 -95146296 - RLTR15 LTR ERVK -71 288 239 4 1130 1238 94 55 11 chrX 71504000 71504183 -95146113 - B2_Mm2 SINE B2 -4 191 1 5 1130 240 213 141 88 chrX 71504183 71504306 -95145990 - RLTR15 LTR ERVK -121 238 110 4 1130 253 265 133 36 chrX 71504335 71504481 -95145815 + MT2B2 LTR ERVL 102 287 -297 6 1130 1458 74 5 16 chrX 71504493 71504686 -95145610 + B2_Mm2 SINE B2 2 192 -3 7 1130 377 246 76 34 chrX 71504686 71504804 -95145492 + B1F2 SINE Alu 6 128 -21 8 1130 789 287 15 19 chrX 71504823 71505029 -95145267 + B3 SINE B2 2 206 -10 9 1130 298 243 216 0 chrX 71505033 71505144 -95145152 - B1_Mm SINE Alu -7 140 6 1 1130 615 245 19 44 chrX 71505321 71505479 -95144817 + B3 SINE B2 59 212 -4 1 1130 270 289 0 0 chrX 71505529 71505581 -95144715 + RSINE1 SINE B4 92 143 -22 1 1130 591 209 0 0 chrX 71505604 71505714 -95144582 - B1_Mus2 SINE Alu 0 147 38 1 1130 614 216 18 0 chrX 71505738 71505849 -95144447 + PB1D9 SINE Alu 2 114 -6 1 1130 475 270 139 38 chrX 71505858 71505898 -95144398 + B3A SINE B2 1 40 -158 1 1130 1522 63 5 0 chrX 71505898 71506089 -95144207 + B2_Mm1a SINE B2 2 193 0 1 1130 475 270 139 38 chrX 71506089 71506206 -95144090 + B3A SINE B2 41 174 -24 1 1130 201 175 25 0 chrX 71506877 71506917 -95143379 + A-rich Low_complexity Low_complexity 1 41 0 1 1130 367 192 26 147 chrX 71506917 71507033 -95143263 + MT2B LTR ERVL 156 257 -344 1 1130 810 72 108 31 chrX 71506934 71507063 -95143233 + B1_Mur4 SINE Alu 7 145 -5 1 1130 440 289 0 28 chrX 71507064 71507171 -95143125 - PB1D7 SINE Alu -6 114 11 2 1130 503 265 20 105 chrX 71507222 71507291 -95143005 + B1F1 SINE Alu 10 67 -82 2 1130 1167 62 0 14 chrX 71507291 71507439 -95142857 + B1_Mus2 SINE Alu 1 146 -1 2 1130 207 0 0 0 chrX 71507440 71507463 -95142833 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 2 1130 503 265 20 105 chrX 71507463 71507543 -95142753 + B1F1 SINE Alu 68 148 -1 2 1130 486 233 0 0 chrX 71507569 71507659 -95142637 + B3 SINE B2 103 192 -24 2 1130 803 156 47 0 chrX 71507692 71507820 -95142476 + B1_Mur4 SINE Alu 10 143 -7 2 1130 228 225 0 0 chrX 71507826 71507866 -95142430 - B3 SINE B2 -15 201 162 2 1130 586 126 11 0 chrX 71507879 71507966 -95142330 - B2_Mm2 SINE B2 -107 88 1 2 1130 546 84 0 0 chrX 71507992 71508063 -95142233 + BC1_Mm scRNA scRNA 1 71 -81 2 1130 540 0 0 0 chrX 71508064 71508124 -95142172 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 1130 214 200 73 115 chrX 71508187 71508203 -95142093 - FAM SINE Alu 0 311 296 3 1130 1223 54 0 0 chrX 71508203 71508350 -95141946 - B1_Mus2 SINE Alu 0 147 1 3 1130 214 200 73 115 chrX 71508350 71508429 -95141867 - FAM SINE Alu -16 295 220 3 1130 624 290 21 54 chrX 71508352 71508538 -95141758 + ID_B1 SINE B4 45 224 0 3 1130 1190 68 0 7 chrX 71508546 71508694 -95141602 + B1_Mus2 SINE Alu 1 147 0 3 1130 225 306 68 48 chrX 71508779 71508882 -95141414 + PB1D7 SINE Alu 1 105 -15 3 1130 1082 153 33 0 chrX 71509726 71509909 -95140387 + B2_Mm1t SINE B2 4 192 -1 3 1130 804 254 55 15 chrX 71509923 71510123 -95140173 + B3 SINE B2 4 211 -5 3 1130 657 292 67 34 chrX 71510879 71511088 -95139208 - ID_B1 SINE B4 -4 220 5 3 1130 1162 82 0 0 chrX 71511213 71511360 -95138936 - B1_Mus1 SINE Alu 0 148 2 3 1130 983 175 70 35 chrX 71512078 71512279 -95138017 - B3 SINE B2 -8 208 1 3 1130 1099 226 122 68 chrX 71512659 71512920 -95137376 - RMER4B LTR ERVK -60 525 264 4 1130 495 0 0 0 chrX 71512920 71512975 -95137321 + (CAG)n Simple_repeat Simple_repeat 2 56 0 4 1130 1099 255 122 90 chrX 71512975 71513192 -95137104 - RMER4B LTR ERVK -322 263 50 4 1130 323 57 0 0 chrX 71513192 71513245 -95137051 + Lx LINE L1 6600 6652 -2 4 1130 1099 255 122 90 chrX 71513245 71513303 -95136993 - RMER4B LTR ERVK -536 49 1 4 1130 1287 27 0 0 chrX 71513513 71513660 -95136636 - B1_Mm SINE Alu 0 147 1 4 1130 396 0 0 0 chrX 71514032 71514076 -95136220 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1130 947 225 20 10 chrX 71514265 71514467 -95135829 + B3 SINE B2 2 205 -11 4 1130 464 235 75 15 chrX 71514473 71514607 -95135689 + B1_Mur1 SINE Alu 2 143 -6 4 1130 1057 71 35 0 chrX 71514634 71514775 -95135521 + B1_Mus2 SINE Alu 1 146 -1 4 1130 937 69 107 0 chrX 71517289 71517420 -95132876 - B1_Mm SINE Alu 0 147 3 4 1130 583 129 182 16 chrX 71517667 71517793 -95132503 - B1_Mus1 SINE Alu 0 148 2 4 1130 542 15 0 15 chrX 71520018 71520086 -95130210 + (TC)n Simple_repeat Simple_repeat 2 68 0 5 1130 854 149 7 15 chrX 71520086 71520222 -95130074 - B1_Mur3 SINE Alu -14 135 1 5 1130 952 209 240 35 chrX 71520366 71520653 -95129643 - Lx6 LINE L1 -95 7365 7020 5 1130 243 0 0 0 chrX 71520670 71520697 -95129599 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 5 1130 1064 122 0 0 chrX 71520697 71520844 -95129452 - B1_Mus1 SINE Alu -1 147 1 5 1130 297 0 0 0 chrX 71520848 71520881 -95129415 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 5 1130 652 57 102 0 chrX 71520888 71520976 -95129320 - B1_Mus2 SINE Alu -1 146 50 5 1130 1287 45 0 0 chrX 71520977 71521133 -95129163 + B2_Mm1a SINE B2 3 158 -35 5 1130 423 0 0 0 chrX 71521135 71521182 -95129114 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 5 1130 485 78 0 0 chrX 71521190 71521254 -95129042 - B1_Mus2 SINE Alu -83 64 1 5 1130 710 173 72 36 chrX 71521259 71521397 -95128899 - B1_Mm SINE Alu 0 147 5 5 1130 1058 189 55 0 chrX 71521411 71521612 -95128684 - B3 SINE B2 0 216 5 6 1130 228 326 43 43 chrX 71521653 71521746 -95128550 - PB1 SINE Alu 0 127 35 6 1130 257 173 0 55 chrX 71522756 71522811 -95127485 - L1MB3 LINE L1 -111 6072 6021 6 1130 535 276 148 16 chrX 71522953 71523145 -95127151 - B4 SINE B4 -51 241 57 6 1130 306 107 0 0 chrX 71523145 71523201 -95127095 + (T)n Simple_repeat Simple_repeat 1 56 0 6 1130 1210 41 7 0 chrX 71523201 71523346 -95126950 - B1_Mus2 SINE Alu 0 147 2 6 1130 376 284 18 18 chrX 71523403 71523514 -95126782 - PB1D7 SINE Alu -7 113 3 6 1130 630 235 33 29 chrX 71523530 71523685 -95126611 - ID_B1 SINE B4 -44 248 86 6 1130 321 68 0 0 chrX 71523706 71523750 -95126546 + (TCCC)n Simple_repeat Simple_repeat 2 45 0 6 1130 257 263 24 106 chrX 71523750 71523835 -95126461 - ID4_ SINE ID -4 79 2 6 1130 408 345 0 17 chrX 71523866 71523981 -95126315 + PB1D10 SINE Alu 3 115 -2 7 1130 388 243 73 13 chrX 71524318 71524468 -95125828 - L1MB3 LINE L1 -199 5984 5826 6 1130 579 138 43 80 chrX 71524469 71524516 -95125780 - B2_Mm1a SINE B2 -1 194 160 7 1130 324 0 0 0 chrX 71524516 71524552 -95125744 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 7 1130 579 48 157 0 chrX 71524552 71524621 -95125675 - B2_Mm1a SINE B2 -19 174 93 7 1130 581 305 78 17 chrX 71524757 71524937 -95125359 - B3A SINE B2 -7 191 1 7 1130 943 150 0 7 chrX 71524954 71525102 -95125194 - B1_Mus2 SINE Alu 0 147 1 7 1130 340 316 5 44 chrX 71525191 71525232 -95125064 - ID4_ SINE ID -39 113 27 7 1130 362 238 0 0 chrX 71525232 71525295 -95125001 - tRNA-Ala-GCY_ tRNA tRNA -7 68 6 7 1130 280 301 13 113 chrX 71525245 71525315 -95124981 - MT2B LTR ERVL -300 301 240 7 1130 279 0 0 0 chrX 71525315 71525346 -95124950 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 1130 280 301 13 113 chrX 71525346 71525425 -95124871 - MT2B LTR ERVL -362 239 167 7 1130 636 236 20 46 chrX 71525351 71525502 -95124794 - ID_B1 SINE B4 -67 157 11 7 1130 335 218 32 24 chrX 71525597 71525702 -95124594 - L1MB3 LINE L1 -683 5617 5514 6 1130 933 131 7 0 chrX 71525726 71525863 -95124433 + B1_Mus1 SINE Alu 10 147 -1 8 1130 346 341 184 7 chrX 71526031 71526167 -95124129 - RSINE1 SINE B4 -2 163 4 8 1130 26 30 0 0 chrX 71526170 71526203 -95124093 + AT_rich Low_complexity Low_complexity 1 33 0 8 1130 389 112 14 16 chrX 71526212 71526282 -95124014 - B1F SINE Alu -20 129 61 8 1130 216 331 88 29 chrX 71529698 71529835 -95120461 - MIR SINE MIR -69 193 49 8 1130 1028 97 89 24 chrX 71530147 71530316 -95119980 - B2_Mm2 SINE B2 -14 181 2 8 1130 713 158 301 12 chrX 71530472 71530638 -95119658 + B3 SINE B2 3 216 0 8 1130 474 257 97 44 chrX 71530648 71530762 -95119534 + B1F2 SINE Alu 1 120 -29 8 1130 557 161 97 9 chrX 71530799 71530912 -95119384 - B1_Mur3 SINE Alu -2 147 25 8 1130 764 181 36 0 chrX 71530958 71531096 -95119200 + B1_Mur3 SINE Alu 1 143 -6 8 1130 237 65 0 0 chrX 71531096 71531127 -95119169 + (GAAA)n Simple_repeat Simple_repeat 1 31 0 9 1130 449 224 58 48 chrX 71531135 71531238 -95119058 + PB1D7 SINE Alu 17 120 0 9 1130 296 325 0 0 chrX 71531277 71531357 -95118939 + ID4_ SINE ID 2 81 -2 9 1130 1087 72 7 0 chrX 71531577 71531715 -95118581 + B1_Mus1 SINE Alu 2 140 -8 9 1130 1177 82 0 0 chrX 71531940 71532086 -95118210 - B1_Mus1 SINE Alu -1 147 2 9 1130 667 191 30 71 chrX 71532100 71532269 -95118027 + RMER10B LTR ERVL 187 348 -50 9 1130 1300 86 34 0 chrX 71532275 71532450 -95117846 - B2_Mm2 SINE B2 -13 182 2 9 1130 414 314 12 0 chrX 71532847 71532963 -95117333 + B1F1 SINE Alu 1 118 -2 9 1130 582 246 0 17 chrX 71533006 71533126 -95117170 - PB1D7 SINE Alu -2 118 1 9 1130 1072 79 0 7 chrX 71535684 71535824 -95114472 + B1_Mus1 SINE Alu 1 139 -9 9 1130 469 215 80 85 chrX 71535888 71536063 -95114233 + B1_Mur1 SINE Alu 1 144 -5 1 1130 425 195 43 54 chrX 71536092 71536184 -95114112 + B1F2 SINE Alu 57 147 -2 1 1130 1172 75 0 13 chrX 71536213 71536362 -95113934 - B1_Mm SINE Alu 0 147 1 1 1130 858 186 7 0 chrX 71536378 71536523 -95113773 - B1_Mus2 SINE Alu 0 147 2 1 1130 780 68 0 0 chrX 71536524 71536627 -95113669 - B1_Mm SINE Alu -43 104 2 1 1130 1381 87 16 0 chrX 71536802 71536985 -95113311 - B2_Mm2 SINE B2 -8 187 2 1 1130 376 263 157 9 chrX 71537051 71537166 -95113130 + ID_B1 SINE B4 93 224 0 1 1130 272 228 82 226 chrX 71537166 71537210 -95113086 + B1_Mm SINE Alu 12 147 0 1 1130 422 286 143 0 chrX 71537224 71537350 -95112946 + RSINE1 SINE B4 20 163 -2 1 1130 608 310 31 42 chrX 71537356 71537548 -95112748 + B3A SINE B2 1 190 -8 1 1130 284 273 15 0 chrX 71537667 71537733 -95112563 + ID4_ SINE ID 16 82 -1 1 1130 221 195 0 24 chrX 71537741 71537783 -95112513 + B3 SINE B2 1 41 -175 1 1130 925 71 39 84 chrX 71537783 71537937 -95112359 + B1_Mus1 SINE Alu 2 148 0 1 1130 324 0 0 0 chrX 71537937 71537973 -95112323 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1130 995 131 18 24 chrX 71537975 71538140 -95112156 + B2_Mm2 SINE B2 27 190 -5 1 1130 946 262 25 0 chrX 71538152 71538354 -95111942 + B3 SINE B2 7 213 -3 1 1130 281 250 54 0 chrX 71538362 71538418 -95111878 + ID SINE ID 2 60 -164 1 1130 275 321 0 54 chrX 71538418 71538474 -95111822 + BC1_Mm scRNA scRNA 2 107 -45 1 1130 482 196 40 30 chrX 71538520 71538620 -95111676 - B1_Mus2 SINE Alu -1 146 46 1 1130 291 167 0 0 chrX 71538622 71538688 -95111608 + T-rich Low_complexity Low_complexity 1 66 0 1 1130 858 153 42 0 chrX 71538688 71538832 -95111464 - B1_Mur4 SINE Alu 0 150 1 1 1130 225 159 0 0 chrX 71538837 71538881 -95111415 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1 1130 219 36 0 0 chrX 71539314 71539342 -95110954 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1 1130 1113 57 28 7 chrX 71539342 71539474 -95110822 - B1_Mus2 SINE Alu -11 136 1 1 1130 1108 92 29 115 chrX 71539487 71539696 -95110600 - B2_Mm2 SINE B2 -3 192 2 1 1130 180 0 0 0 chrX 71539732 71539752 -95110544 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 1130 408 220 32 42 chrX 71539770 71539865 -95110431 - RSINE1 SINE B4 -21 144 51 1 1130 806 260 116 8 chrX 71539967 71540234 -95110062 - MLT1C LTR MaLR 0 467 172 1 1130 451 276 108 16 chrX 71540235 71540364 -95109932 + ID_B1 SINE B4 84 224 0 1 1130 238 238 40 160 chrX 71540378 71540503 -95109793 - MLT1C LTR MaLR -286 181 72 1 1130 756 190 0 0 chrX 71540686 71540807 -95109489 - B3 SINE B2 -86 130 10 1 1130 227 355 0 0 chrX 71540800 71540862 -95109434 + tRNA-Ala-GCY_ tRNA tRNA 7 68 -7 1 1130 863 136 188 28 chrX 71540999 71541180 -95109116 - URR1A DNA MER1_type -15 211 2 1 1130 423 35 17 0 chrX 71541286 71541344 -95108952 + B1_Mus2 SINE Alu 89 147 0 1 1130 224 77 0 25 chrX 71541351 71541391 -95108905 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1130 1159 44 0 0 chrX 71541403 71541540 -95108756 + B1_Mus1 SINE Alu 3 139 -9 1 1130 195 42 0 0 chrX 71541566 71541590 -95108706 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 1 1130 247 280 152 48 chrX 71541606 71541711 -95108585 + PB1D10 SINE Alu 1 116 -1 1 1130 1221 61 0 0 chrX 71543298 71543446 -95106850 + B1_Mus1 SINE Alu 1 148 0 1 1130 271 289 13 0 chrX 71543526 71543602 -95106694 - MIRb SINE MIR -101 167 91 1 1130 488 16 0 16 chrX 71543614 71543676 -95106620 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 1130 270 300 122 13 chrX 71544460 71544648 -95105648 - L2a LINE L2 -215 3160 2942 1 1130 272 27 27 0 chrX 71544993 71545030 -95105266 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 1130 1005 32 0 16 chrX 71545030 71545151 -95105145 - B1_Mus2 SINE Alu -10 137 18 1 1130 31 26 0 0 chrX 71550309 71550347 -95099949 + GC_rich Low_complexity Low_complexity 1 38 0 1 1130 291 191 0 0 chrX 71550597 71550660 -95099636 + (CAG)n Simple_repeat Simple_repeat 3 65 0 1 1130 240 149 0 0 chrX 71550818 71550865 -95099431 + (CACCC)n Simple_repeat Simple_repeat 5 51 0 1 1130 1010 226 19 14 chrX 71553768 71553983 -95096313 + B3 SINE B2 1 216 0 1 1130 250 246 35 0 chrX 71554695 71554752 -95095544 + B1F2 SINE Alu 2 60 -89 1 1130 749 237 57 14 chrX 71554808 71555018 -95095278 - ID_B1 SINE B4 -5 219 1 1 1130 612 164 0 0 chrX 71556527 71556637 -95093659 + (TG)n Simple_repeat Simple_repeat 1 110 0 1 1130 198 0 0 0 chrX 71556800 71556822 -95093474 + (TCC)n Simple_repeat Simple_repeat 3 24 0 1 1130 475 294 102 27 chrX 71557415 71557562 -95092734 + RSINE1 SINE B4 8 165 0 1 1130 523 220 226 0 chrX 71557571 71557739 -95092557 - B3 SINE B2 -10 206 1 1 1130 1072 70 14 14 chrX 71557831 71557977 -95092319 + B1_Mus1 SINE Alu 1 146 -2 1 1130 315 191 0 0 chrX 71558445 71558513 -95091783 + (CCG)n Simple_repeat Simple_repeat 3 70 0 1 1130 182 62 0 30 chrX 71559217 71559250 -95091046 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1 1130 1222 55 0 0 chrX 71559251 71559397 -95090899 - B1_Mus2 SINE Alu 0 147 2 1 1130 244 299 0 0 chrX 71560840 71560917 -95089379 + GA-rich Low_complexity Low_complexity 1 77 0 1 1130 234 0 0 0 chrX 71560986 71561012 -95089284 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1130 288 385 73 8 chrX 71561182 71561305 -95088991 + MER3 DNA MER1_type 2 132 -77 1 1130 419 258 73 59 chrX 71561698 71561738 -95088558 - PB1D10 SINE Alu 0 149 105 1 1130 1128 43 36 0 chrX 71561738 71561877 -95088419 - B1_Mus2 SINE Alu -1 146 3 1 1130 419 260 18 46 chrX 71561877 71561972 -95088324 - PB1D10 SINE Alu -13 104 12 1 1130 181 262 63 32 chrX 71561984 71562047 -95088249 + L3 LINE CR1 930 994 -3495 1 1130 504 235 35 35 chrX 71562148 71562289 -95088007 - B1_Mus1 SINE Alu -1 147 7 1 1130 1726 21 0 0 chrX 71562310 71562502 -95087794 - B2_Mm1a SINE B2 0 193 2 1 1130 597 216 96 7 chrX 71562579 71562714 -95087582 + B1_Mur2 SINE Alu 2 148 -1 1 1130 642 200 11 27 chrX 71563053 71563180 -95087116 + ID_B1 SINE B4 86 206 -18 1 1130 484 316 42 98 chrX 71563284 71563316 -95086980 - B4 SINE B4 -35 257 176 1 1130 864 167 7 0 chrX 71563316 71563454 -95086842 - B1_Mus2 SINE Alu 0 147 9 1 1130 484 316 42 98 chrX 71563454 71563498 -95086798 - B4 SINE B4 -35 175 56 1 1130 462 200 21 10 chrX 71565000 71565096 -95085200 + PB1D10 SINE Alu 6 102 -15 1 1130 387 0 0 0 chrX 71565096 71565139 -95085157 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1130 300 172 0 0 chrX 71565142 71565200 -95085096 + GA-rich Low_complexity Low_complexity 3 60 0 1 1131 981 275 21 70 chrX 71565539 71565746 -95084550 - B4 SINE B4 -18 274 80 1 1131 1212 104 5 52 chrX 71565746 71565939 -95084357 + B2_Mm2 SINE B2 3 186 -9 1 1131 981 275 21 70 chrX 71565939 71566016 -95084280 - B4 SINE B4 -213 79 4 1 1131 630 278 30 0 chrX 71566063 71566196 -95084100 + B1F2 SINE Alu 3 139 -10 1 1131 931 152 21 0 chrX 71566247 71566392 -95083904 - B1_Mus1 SINE Alu 0 148 1 1 1131 923 106 57 1 chrX 71567463 71567627 -95082669 + B2_Mm2 SINE B2 3 205 -11 1 1131 723 206 13 70 chrX 71567652 71567674 -95082622 - B1_Mur3 SINE Alu -1 148 131 1 1131 1338 86 26 26 chrX 71567674 71567865 -95082431 - B2_Mm2 SINE B2 -4 191 1 1 1131 723 206 13 70 chrX 71567865 71567999 -95082297 - B1_Mur3 SINE Alu -19 130 1 1 1131 362 129 48 0 chrX 71568085 71568143 -95082153 - MTEa LTR MaLR 0 379 319 1 1131 691 202 191 56 chrX 71568143 71568321 -95081975 + B3 SINE B2 1 202 -14 1 1131 1154 184 73 60 chrX 71568309 71568564 -95081732 - MTEa LTR MaLR -40 354 92 1 1131 649 262 14 0 chrX 71569245 71569386 -95080910 + ID_B1 SINE B4 82 224 0 1 1131 745 243 14 0 chrX 71569380 71569520 -95080776 + MTEa LTR MaLR 30 171 -208 1 1131 647 142 7 22 chrX 71569528 71569665 -95080631 + GA-rich Low_complexity Low_complexity 3 137 0 1 1131 483 230 0 52 chrX 71569668 71569813 -95080483 + MTEa LTR MaLR 231 379 0 1 1131 257 294 69 0 chrX 71570142 71570244 -95080052 - L1MC LINE L1 -2285 5597 5489 1 1131 3774 193 118 11 chrX 71570317 71571146 -95079150 - RMER1A Other Other -10 1020 135 1 1131 662 143 8 0 chrX 71571152 71571271 -95079025 + (TA)n Simple_repeat Simple_repeat 2 121 0 1 1131 964 145 14 0 chrX 71571303 71571448 -95078848 - B1_Mur4 SINE Alu -1 149 3 1 1131 269 104 0 0 chrX 71571458 71571506 -95078790 - B3 SINE B2 0 216 169 1 1131 235 345 0 0 chrX 71571504 71571559 -95078737 - B4A SINE B4 -154 138 84 1 1131 348 77 0 0 chrX 71571590 71571642 -95078654 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1131 521 278 127 0 chrX 71571647 71571773 -95078523 - RSINE1 SINE B4 -22 143 2 1 1131 524 276 182 0 chrX 71571790 71571971 -95078325 - B3 SINE B2 0 216 3 1 1131 388 184 111 120 chrX 71572206 71572323 -95077973 + B1_Mur4 SINE Alu 28 143 -7 1 1131 458 350 0 21 chrX 71572333 71572476 -95077820 + B4A SINE B4 1 140 -152 1 1131 2044 109 30 3 chrX 71572689 71572992 -95077304 - ORR1A2 LTR MaLR -8 319 9 1 1131 1211 261 46 42 chrX 71573002 71573457 -95076839 + L1MB7 LINE L1 5718 6174 -10 1 1131 308 143 0 39 chrX 71573474 71573525 -95076771 + B3A SINE B2 1 49 -149 1 1131 469 236 10 0 chrX 71573596 71573704 -95076592 + PB1D7 SINE Alu 9 117 -3 1 1131 245 330 10 78 chrX 71573692 71573715 -95076581 + ID SINE ID 67 82 -142 1 1131 312 295 24 33 chrX 71573715 71573827 -95076469 + PB1D10 SINE Alu 4 119 -1 2 1131 180 49 98 0 chrX 71580875 71580916 -95069380 + (TTTTG)n Simple_repeat Simple_repeat 5 49 0 2 1131 195 42 0 0 chrX 71580917 71580941 -95069355 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1131 279 0 0 0 chrX 71581006 71581037 -95069259 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1131 497 316 103 72 chrX 71587631 71587838 -95062458 + B4A SINE B4 4 230 -62 2 1131 1063 207 20 5 chrX 71587838 71588037 -95062259 + B3 SINE B2 1 202 -14 2 1131 497 312 104 72 chrX 71588037 71588110 -95062186 + B4A SINE B4 231 292 0 2 1131 429 206 0 128 chrX 71588164 71588281 -95062015 + MT2B LTR ERVL 156 257 -344 2 1131 781 225 7 0 chrX 71588178 71588320 -95061976 + B1_Mur2 SINE Alu 1 143 -6 2 1131 188 261 87 94 chrX 71588516 71588643 -95061653 - L2 LINE L2 -1467 1952 1827 2 1131 198 0 0 0 chrX 71589442 71589464 -95060832 + (CAGGC)n Simple_repeat Simple_repeat 3 24 0 2 1131 232 342 258 15 chrX 71589954 71590164 -95060132 + L2 LINE L2 2594 2854 -565 2 1131 952 199 134 0 chrX 71590164 71590350 -95059946 + B3 SINE B2 1 211 -5 2 1131 536 315 143 12 chrX 71590509 71590760 -95059536 + B4A SINE B4 1 284 -8 2 1131 455 238 86 0 chrX 71590835 71590940 -95059356 + ID_B1 SINE B4 110 223 -1 2 1131 313 292 11 0 chrX 71591029 71591118 -95059178 + Lx8 LINE L1 7132 7221 -252 2 1131 664 258 25 70 chrX 71591308 71591508 -95058788 + B3A SINE B2 1 191 -7 2 1131 306 0 0 0 chrX 71591508 71591542 -95058754 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1131 1002 96 162 0 chrX 71591549 71591716 -95058580 + B2_Mm2 SINE B2 1 194 -1 2 1131 1194 48 7 0 chrX 71591720 71591865 -95058431 + B1_Mus1 SINE Alu 1 146 -2 2 1131 945 47 141 0 chrX 71591888 71592016 -95058280 + B1_Mus2 SINE Alu 2 147 0 2 1131 283 114 14 28 chrX 71592016 71592088 -95058208 + (CAAAC)n Simple_repeat Simple_repeat 4 74 0 2 1131 216 0 0 0 chrX 71592085 71592109 -95058187 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1131 780 218 0 0 chrX 71592126 71592268 -95058028 + B1_Mus1 SINE Alu 4 145 -3 2 1131 677 211 101 7 chrX 71592295 71592443 -95057853 - Lx9 LINE L1 -1150 6494 6333 2 1131 309 271 383 17 chrX 71592556 71592792 -95057504 - Lx9 LINE L1 -1591 6053 5732 2 1131 602 223 33 0 chrX 71592793 71592914 -95057382 + Lx9 LINE L1 6619 6743 -901 2 1131 2569 140 110 23 chrX 71592918 71593161 -95057135 + RMER4B LTR ERVK 1 283 -302 2 1131 183 42 0 0 chrX 71593161 71593185 -95057111 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 1131 2569 140 110 23 chrX 71593185 71593316 -95056980 + RMER4B LTR ERVK 284 423 -162 2 1131 1363 84 16 21 chrX 71593316 71593510 -95056786 - B2_Mm2 SINE B2 -2 193 1 2 1131 2569 119 282 29 chrX 71593510 71593638 -95056658 + RMER4B LTR ERVK 337 514 -71 2 1131 2168 232 73 15 chrX 71593638 71594225 -95056071 + Lx9 LINE L1 6742 7362 -282 2 1131 941 91 191 19 chrX 71594229 71594362 -95055934 + B2_Mm2 SINE B2 2 153 -42 2 1131 422 79 16 0 chrX 71594362 71594425 -95055871 + (TA)n Simple_repeat Simple_repeat 2 65 0 2 1131 1218 35 0 0 chrX 71594426 71594567 -95055729 - B1_Mus1 SINE Alu -6 142 2 2 1131 941 91 191 19 chrX 71594567 71594588 -95055708 + B2_Mm2 SINE B2 154 185 -10 2 1131 673 197 43 50 chrX 71594600 71594739 -95055557 + B1_Mur1 SINE Alu 1 138 -11 2 1131 740 190 120 0 chrX 71594798 71594940 -95055356 + B3A SINE B2 1 159 -39 2 1131 25 31 0 0 chrX 71594959 71594991 -95055305 + AT_rich Low_complexity Low_complexity 1 32 0 2 1131 1243 84 25 45 chrX 71594992 71595191 -95055105 - B2_Mm2 SINE B2 0 195 1 2 1131 246 32 0 0 chrX 71595224 71595255 -95055041 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 1131 467 216 42 18 chrX 71595283 71595395 -95054901 + B3A SINE B2 2 117 -76 2 1131 242 243 80 13 chrX 71595471 71595546 -95054750 + L1MEc LINE L1 590 669 -5731 2 1131 407 260 29 0 chrX 71596076 71596180 -95054116 + ID_B1 SINE B4 118 224 0 2 1131 1048 106 0 0 chrX 71596199 71596341 -95053955 - B1_Mus2 SINE Alu -5 142 1 2 1131 398 227 207 16 chrX 71596431 71596552 -95053744 + ID_B1 SINE B4 81 224 0 2 1131 299 306 59 0 chrX 71596644 71596729 -95053567 - RSINE1 SINE B4 -1 164 75 2 1131 234 339 0 17 chrX 71596807 71596867 -95053429 - ID4_ SINE ID -2 81 23 2 1131 1097 102 7 0 chrX 71596886 71597033 -95053263 + B1_Mus1 SINE Alu 1 148 0 2 1131 1268 103 11 0 chrX 71597036 71597211 -95053085 + B2_Mm1t SINE B2 2 178 -15 2 1131 295 140 310 35 chrX 71597296 71597412 -95052884 + B2_Mm2 SINE B2 47 194 -1 2 1131 451 215 0 108 chrX 71597907 71598027 -95052269 - B1_Mur1 SINE Alu 0 149 43 2 1131 189 107 0 0 chrX 71598564 71598592 -95051704 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 2 1131 294 184 0 0 chrX 71599025 71599101 -95051195 + G-rich Low_complexity Low_complexity 1 76 0 2 1131 417 256 47 101 chrX 71599274 71599319 -95050977 + B1F2 SINE Alu 2 47 -102 2 1131 1342 77 133 0 chrX 71599319 71599515 -95050781 + URR1A DNA MER1_type 5 226 0 2 1131 417 256 47 101 chrX 71599515 71599617 -95050679 + B1F2 SINE Alu 48 141 -8 2 1131 265 250 42 83 chrX 71599718 71599814 -95050482 + MT2B LTR ERVL 166 257 -344 2 1131 595 160 104 0 chrX 71599732 71599838 -95050458 + B1_Mur2 SINE Alu 18 134 -15 2 1131 659 184 25 0 chrX 71599909 71600034 -95050262 - B1_Mus2 SINE Alu -12 138 5 2 1131 683 216 133 31 chrX 71600046 71600242 -95050054 - B3 SINE B2 0 216 1 2 1131 264 222 0 27 chrX 71600346 71600420 -95049876 - Lx8 LINE L1 -3 7470 7399 2 1131 797 83 225 0 chrX 71600432 71600552 -95049744 - B1_Mus1 SINE Alu -1 147 1 2 1131 931 228 43 5 chrX 71600599 71600806 -95049490 + B3 SINE B2 1 215 -1 2 1131 9771 147 20 146 chrX 71600956 71601270 -95049026 + Lx6 LINE L1 2843 3126 -2751 2 1131 1239 41 7 0 chrX 71601270 71601416 -95048880 + B1_Mus2 SINE Alu 1 147 0 2 1131 9771 147 20 146 chrX 71601416 71601748 -95048548 + Lx6 LINE L1 3127 3457 -2420 2 1131 1221 102 23 0 chrX 71601748 71601924 -95048372 + B2_Mm1t SINE B2 9 188 -5 2 1131 9771 147 20 146 chrX 71601924 71602629 -95047667 + Lx6 LINE L1 3458 4161 -1716 2 1131 1444 33 71 16 chrX 71602629 71602788 -95047508 + B2_Mm1a SINE B2 1 159 -34 2 1131 252 0 0 0 chrX 71602788 71602816 -95047480 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2 1131 1444 33 71 16 chrX 71602816 71602839 -95047457 + B2_Mm1a SINE B2 160 193 0 2 1131 9771 147 20 146 chrX 71602839 71603160 -95047136 + Lx6 LINE L1 4162 4477 -1400 2 1131 808 176 7 33 chrX 71603160 71603313 -95046983 + B1_Mur4 SINE Alu 2 150 0 2 1131 1272 20 0 13 chrX 71603314 71603463 -95046833 + B1_Mus1 SINE Alu 1 147 -1 2 1131 9771 147 20 146 chrX 71603463 71603744 -95046552 + Lx6 LINE L1 4478 4673 -1204 2 1131 1382 75 48 0 chrX 71603744 71603930 -95046366 + B2_Mm2 SINE B2 1 195 0 2 1131 9771 147 20 146 chrX 71603930 71604290 -95046006 + Lx6 LINE L1 4674 5022 -855 2 1131 259 231 117 48 chrX 71604314 71604458 -95045838 + RLTR20A LTR ERVK 104 255 -437 2 1131 5022 154 21 4 chrX 71604844 71605085 -95045211 + Lx6 LINE L1 5018 5265 -612 2 1131 1166 88 0 0 chrX 71605085 71605233 -95045063 + B1_Mus1 SINE Alu 1 148 0 2 1131 5552 193 60 52 chrX 71605233 71606712 -95043584 + Lx6 LINE L1 5266 6743 -717 2 1131 234 0 0 0 chrX 71606712 71606738 -95043558 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1131 5552 220 87 85 chrX 71606738 71607409 -95042887 + Lx6 LINE L1 6744 7436 -24 2 1131 1145 76 0 0 chrX 71607413 71607557 -95042739 + B1_Mus2 SINE Alu 1 144 -3 2 1131 339 25 0 0 chrX 71607572 71607612 -95042684 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 2 1131 279 0 0 0 chrX 71607613 71607644 -95042652 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1131 765 98 70 54 chrX 71607644 71607773 -95042523 - B1_Mur4 SINE Alu -11 139 9 2 1131 29 22 0 21 chrX 71607862 71607884 -95042412 + AT_rich Low_complexity Low_complexity 1 22 0 2 1131 780 206 0 14 chrX 71607884 71608032 -95042264 - B1_Mur2 SINE Alu 0 149 4 2 1131 29 22 0 21 chrX 71608032 71608056 -95042240 + AT_rich Low_complexity Low_complexity 1 24 0 2 1131 357 296 22 152 chrX 71608064 71608295 -95042001 + ID_B1 SINE B4 4 204 -20 2 1131 457 202 0 124 chrX 71608188 71608301 -95041995 + B1F SINE Alu 21 119 -1 2 1131 302 324 72 0 chrX 71608549 71608660 -95041636 - PB1 SINE Alu -7 120 2 2 1131 512 312 33 38 chrX 71608925 71609138 -95041158 + L1MC4 LINE L1 6687 6898 -1144 2 1131 287 264 28 132 chrX 71609159 71609194 -95041102 + MT2B LTR ERVL 129 148 -453 2 1131 800 154 7 49 chrX 71609194 71609337 -95040959 + B1_Mur4 SINE Alu 3 139 -11 2 1131 261 0 0 0 chrX 71609337 71609366 -95040930 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 1131 284 306 188 70 chrX 71611041 71611371 -95038925 + MLT1K LTR MaLR 225 593 -2 2 1131 25 51 0 0 chrX 71613853 71613892 -95036404 + GC_rich Low_complexity Low_complexity 1 39 0 2 1131 524 261 0 8 chrX 71616714 71616845 -95033451 + ID_B1 SINE B4 91 220 -4 2 1131 1257 20 0 20 chrX 71617199 71617348 -95032948 - B1_Mm SINE Alu 0 147 2 2 1131 623 250 14 7 chrX 71617471 71617612 -95032684 - B1_Mur1 SINE Alu -5 144 3 2 1131 523 170 143 0 chrX 71617639 71617751 -95032545 - B1_Mur1 SINE Alu -11 138 11 2 1131 335 231 112 32 chrX 71617751 71617764 -95032532 - ID_B1 SINE B4 -11 213 79 2 1131 584 294 87 5 chrX 71618923 71619108 -95031188 + B3 SINE B2 3 202 -14 2 1131 216 298 0 0 chrX 71619158 71619201 -95031095 + polypyrimidine Low_complexity Low_complexity 17 59 0 2 1131 1013 112 0 0 chrX 71619201 71619344 -95030952 - B1_Mus1 SINE Alu -5 143 1 2 1131 216 298 0 0 chrX 71619344 71619357 -95030939 + polypyrimidine Low_complexity Low_complexity 4 16 0 2 1131 1239 41 0 0 chrX 71619421 71619568 -95030728 - B1_Mus2 SINE Alu 0 147 1 2 1131 228 244 24 71 chrX 71619579 71619663 -95030633 + MT2B LTR ERVL 188 267 -334 2 1131 482 198 0 38 chrX 71619592 71619697 -95030599 + B1_Mus2 SINE Alu 41 141 -6 2 1131 306 240 238 40 chrX 71619716 71619842 -95030454 + RSINE1 SINE B4 13 163 -2 2 1131 1072 84 35 0 chrX 71619853 71619996 -95030300 - B1_Mus1 SINE Alu 0 148 1 2 1131 735 155 28 21 chrX 71620128 71620273 -95030023 - B1_Mus2 SINE Alu 0 147 2 2 1131 1243 41 0 0 chrX 71620301 71620446 -95029850 + B1_Mus2 SINE Alu 1 145 -2 3 1131 925 0 88 0 chrX 71620446 71620662 -95029634 + (GA)n Simple_repeat Simple_repeat 1 234 0 3 1131 256 24 49 0 chrX 71620763 71620804 -95029492 + (TTG)n Simple_repeat Simple_repeat 2 44 0 3 1131 1199 62 0 0 chrX 71620809 71620955 -95029341 - B1_Mus2 SINE Alu 0 147 2 3 1131 1309 83 17 0 chrX 71621193 71621374 -95028922 + B2_Mm1t SINE B2 2 185 -8 3 1131 1121 109 0 0 chrX 71621384 71621531 -95028765 + B1_Mus1 SINE Alu 1 147 -1 3 1131 627 251 57 23 chrX 71621567 71621742 -95028554 + B3A SINE B2 1 181 -17 3 1131 2281 205 58 78 chrX 71621744 71622014 -95028282 - RMER15 LTR ERVL 0 575 290 3 1131 1363 33 71 11 chrX 71622014 71622196 -95028100 - B2_Mm2 SINE B2 -1 194 2 3 1131 2281 205 58 78 chrX 71622196 71622512 -95027784 - RMER15 LTR ERVL -286 289 1 3 1131 25 0 0 0 chrX 71622527 71622552 -95027744 + AT_rich Low_complexity Low_complexity 1 25 0 3 1131 776 215 69 58 chrX 71622585 71622773 -95027523 + B3A SINE B2 8 197 -1 3 1131 1366 72 11 0 chrX 71622861 71623041 -95027255 + B2_Mm1t SINE B2 2 183 -10 3 1131 445 253 204 21 chrX 71623217 71623403 -95026893 - ID_B1 SINE B4 -3 221 2 3 1131 659 166 18 170 chrX 71623439 71623657 -95026639 - B2_Mm1a SINE B2 -8 185 1 3 1131 559 269 81 0 chrX 71623699 71623848 -95026448 - B3 SINE B2 -28 188 28 3 1131 555 90 0 0 chrX 71623900 71623978 -95026318 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 3 1131 797 171 158 6 chrX 71624025 71624202 -95026094 + URR1B DNA MER1_type 1 204 -21 3 1131 925 127 14 0 chrX 71624210 71624352 -95025944 + B1_Mur4 SINE Alu 7 150 0 3 1131 266 256 98 90 chrX 71624458 71624591 -95025705 + B4A SINE B4 86 219 -73 3 1131 354 192 87 48 chrX 71624475 71624601 -95025695 + B1F1 SINE Alu 19 149 0 3 1131 824 309 0 14 chrX 71624623 71624833 -95025463 + B4A SINE B4 1 207 -85 3 1131 651 46 0 0 chrX 71624942 71625029 -95025267 + (CA)n Simple_repeat Simple_repeat 2 88 0 3 1131 1945 104 30 3 chrX 71625048 71625346 -95024950 + ORR1A2 LTR MaLR 9 314 -13 3 1131 774 197 0 0 chrX 71625445 71625577 -95024719 + B4 SINE B4 97 228 -64 3 1131 1172 55 0 0 chrX 71625579 71625716 -95024580 + B1_Mm SINE Alu 1 137 -10 3 1131 183 42 0 0 chrX 71625716 71625740 -95024556 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1131 625 313 6 24 chrX 71625774 71625941 -95024355 + RSINE1 SINE B4 2 165 0 3 1131 36 40 0 0 chrX 71625970 71626020 -95024276 + AT_rich Low_complexity Low_complexity 1 50 0 3 1131 324 0 0 0 chrX 71626036 71626072 -95024224 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1131 372 252 80 9 chrX 71626104 71626216 -95024080 + B3 SINE B2 96 215 -1 3 1131 296 271 0 14 chrX 71626232 71626303 -95023993 + B4A SINE B4 208 277 -15 3 1131 311 208 0 0 chrX 71626334 71626387 -95023909 + B4 SINE B4 219 271 -21 3 1131 467 259 196 0 chrX 71627017 71627129 -95023167 + RSINE1 SINE B4 3 136 -29 3 1131 245 211 84 0 chrX 71627239 71627310 -95022986 + L1MC1 LINE L1 6257 6333 0 3 1131 378 235 65 149 chrX 71627404 71627506 -95022790 + B4 SINE B4 1 97 -195 3 1131 1163 49 7 0 chrX 71627506 71627648 -95022648 + B1_Mm SINE Alu 5 147 0 3 1131 378 235 65 149 chrX 71627648 71627727 -95022569 + B4 SINE B4 98 157 -135 3 1131 3534 56 50 18 chrX 71627727 71628184 -95022112 + MT2C_Mm LTR ERVL 4 475 0 3 1131 378 235 65 149 chrX 71628184 71628216 -95022080 + B4 SINE B4 158 196 -96 3 1131 523 200 43 0 chrX 71628233 71628348 -95021948 + PB1D9 SINE Alu 1 120 0 3 1131 472 239 48 0 chrX 71628368 71628489 -95021807 + PB1D9 SINE Alu 13 146 -3 3 1131 262 260 80 27 chrX 71628509 71628584 -95021712 + B4 SINE B4 212 290 -2 3 1131 474 256 173 0 chrX 71628855 71628988 -95021308 - RSINE1 SINE B4 -2 163 8 3 1131 374 287 7 79 chrX 71628998 71629088 -95021208 - ID_B1 SINE B4 -16 208 126 3 1131 3118 37 53 3 chrX 71629088 71629465 -95020831 + MTA_Mm LTR MaLR 1 396 0 3 1131 374 287 7 79 chrX 71629465 71629514 -95020782 - ID_B1 SINE B4 -99 125 79 3 1131 830 251 60 37 chrX 71631276 71631491 -95018805 - ID_B1 SINE B4 0 224 5 3 1131 858 271 125 42 chrX 71633490 71633921 -95016375 + MLT1C LTR MaLR 1 467 0 3 1131 1209 258 84 123 chrX 71633921 71634130 -95016166 + MLT1C-int LTR MaLR 1 153 -1218 3 1131 412 312 0 0 chrX 71634130 71634242 -95016054 + PB1D10 SINE Alu 1 112 -5 3 1131 1209 258 84 123 chrX 71634242 71634650 -95015646 + MLT1C-int LTR MaLR 154 594 -777 3 1131 510 289 0 0 chrX 71634648 71634769 -95015527 + ID_B1 SINE B4 95 215 -9 3 1131 344 287 122 0 chrX 71634826 71634941 -95015355 + B1F SINE Alu 17 145 -4 3 1131 344 295 13 0 chrX 71634955 71635033 -95015263 + ID4_ SINE ID 2 80 -3 3 1131 1245 283 48 154 chrX 71635037 71635668 -95014628 + MLT1C-int LTR MaLR 605 1168 -203 3 1131 407 200 0 24 chrX 71637049 71637131 -95013165 + ID4 SINE ID 3 82 -1 3 1131 225 0 0 0 chrX 71637747 71637772 -95012524 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 1131 450 277 36 0 chrX 71638752 71638864 -95011432 - B1F SINE Alu -24 125 10 3 1131 229 204 23 0 chrX 71639384 71639428 -95010868 + PB1D7 SINE Alu 13 57 -63 3 1131 546 205 17 43 chrX 71639389 71639506 -95010790 + ID_B1 SINE B4 100 213 -11 3 1131 23 33 0 0 chrX 71639593 71639623 -95010673 + AT_rich Low_complexity Low_complexity 1 30 0 3 1131 581 224 78 52 chrX 71639627 71639820 -95010476 + B3A SINE B2 1 198 0 3 1131 361 258 22 22 chrX 71639950 71640041 -95010255 - B1_Mur3 SINE Alu -56 93 3 3 1131 259 260 178 10 chrX 71640053 71640154 -95010142 - ID_B1 SINE B4 -6 218 101 3 1131 999 146 7 0 chrX 71640316 71640460 -95009836 + B1_Mur4 SINE Alu 1 145 -5 3 1131 306 0 0 0 chrX 71641025 71641059 -95009237 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 3 1131 1096 67 0 0 chrX 71641062 71641212 -95009084 - B2_Mm2 SINE B2 -45 150 1 3 1131 249 298 18 0 chrX 71641212 71641266 -95009030 - B1F2 SINE Alu -94 55 1 3 1131 34 0 0 0 chrX 71641293 71641327 -95008969 + AT_rich Low_complexity Low_complexity 1 34 0 3 1131 1104 210 5 14 chrX 71641327 71641544 -95008752 - B3 SINE B2 0 216 2 3 1131 594 262 54 14 chrX 71641861 71642008 -95008288 - ID_B1 SINE B4 -70 154 2 3 1131 499 251 1 63 chrX 71642107 71642250 -95008046 + B1F SINE Alu 1 136 -13 3 1131 423 0 0 0 chrX 71642250 71642297 -95007999 + (CAAAC)n Simple_repeat Simple_repeat 1 47 0 3 1131 317 132 0 0 chrX 71642299 71642352 -95007944 + B3A SINE B2 2 54 -144 3 1131 3957 151 108 16 chrX 71642355 71643198 -95007098 + RMER19B LTR ERVK 1 890 -12 3 1131 606 289 12 42 chrX 71643206 71643372 -95006924 + B3 SINE B2 52 212 -4 3 1131 313 252 107 2 chrX 71643417 71643525 -95006771 + B1F SINE Alu 1 115 -2 3 1131 1263 34 0 0 chrX 71643542 71643689 -95006607 - B1_Mm SINE Alu 0 147 1 3 1131 348 287 8 23 chrX 71644720 71644852 -95005444 - ID_B1 SINE B4 -1 223 94 3 1131 2886 181 148 11 chrX 71645258 71645906 -95004390 + RMER19A LTR ERVK 1 737 0 3 1131 993 79 0 0 chrX 71646003 71646142 -95004154 + B1_Mus1 SINE Alu 10 148 0 3 1131 664 231 15 8 chrX 71646469 71646600 -95003696 - B1_Mur1 SINE Alu -16 133 2 3 1131 995 244 10 5 chrX 71646612 71646818 -95003478 - B3 SINE B2 -9 207 1 3 1131 282 202 23 23 chrX 71646862 71646948 -95003348 - L1MB7 LINE L1 -6 6178 6093 3 1131 249 263 0 50 chrX 71647052 71647112 -95003184 - ID_B1 SINE B4 -51 173 117 3 1131 507 305 46 35 chrX 71647114 71647311 -95002985 - Lx5 LINE L1 -39 7011 6813 3 1131 493 335 12 30 chrX 71647382 71647548 -95002748 - RSINE1 SINE B4 -2 163 1 3 1131 400 324 14 20 chrX 71647549 71647697 -95002599 - B1_Mur1 SINE Alu 0 149 3 3 1131 416 255 98 0 chrX 71647737 71647839 -95002457 + PB1 SINE Alu 13 124 -3 3 1131 509 183 57 9 chrX 71647855 71647960 -95002336 + PB1D9 SINE Alu 11 120 0 3 1131 736 187 35 28 chrX 71648078 71648221 -95002075 - B1_Mur1 SINE Alu -5 144 1 3 1131 1174 68 0 0 chrX 71648249 71648395 -95001901 - B1_Mus1 SINE Alu -2 146 1 3 1131 545 247 0 129 chrX 71648610 71648796 -95001500 - RSINE1 SINE B4 0 165 4 3 1131 442 271 34 20 chrX 71648899 71649046 -95001250 - B1F SINE Alu 0 149 1 3 1131 217 211 0 50 chrX 71649073 71649133 -95001163 + (TATG)n Simple_repeat Simple_repeat 4 60 0 3 1131 886 143 169 0 chrX 71649573 71649762 -95000534 - URR1A DNA MER1_type -5 221 1 3 1131 483 198 11 0 chrX 71649771 71649862 -95000434 + ID_B1 SINE B4 129 220 -4 3 1131 584 268 58 29 chrX 71649970 71650143 -95000153 - RMER12 LTR ERVK 0 1322 1145 3 1131 5058 176 79 29 chrX 71650263 71650685 -94999611 - RMER12 LTR ERVK -85 1237 769 3 1131 201 74 0 0 chrX 71650685 71650712 -94999584 + (TGGA)n Simple_repeat Simple_repeat 1 27 0 3 1131 5058 176 79 29 chrX 71650712 71651467 -94998829 - RMER12 LTR ERVK -554 768 2 3 1131 1501 149 271 7 chrX 71651534 71651844 -94998452 - ORR1B1 LTR MaLR 0 394 3 3 1131 506 254 0 8 chrX 71651858 71651977 -94998319 - ID_B1 SINE B4 -8 216 99 3 1131 1238 143 153 0 chrX 71652250 71652577 -94997719 - RLTR30 LTR ERV1 -2 377 1 3 1131 314 213 0 0 chrX 71653136 71653197 -94997099 + B3A SINE B2 5 65 -133 3 1131 1176 62 7 0 chrX 71654221 71654367 -94995929 + B1_Mus2 SINE Alu 1 147 0 3 1131 219 146 0 0 chrX 71654367 71654408 -94995888 + (A)n Simple_repeat Simple_repeat 1 41 0 3 1131 341 213 0 39 chrX 71654459 71654537 -94995759 + B1_Mus1 SINE Alu 9 83 -65 3 1131 258 196 356 0 chrX 71654656 71654746 -94995550 + MT2A LTR ERVL 410 531 -2 3 1131 591 252 0 8 chrX 71658180 71658304 -94991992 - ID_B1 SINE B4 -20 204 82 4 1131 306 286 28 9 chrX 71658330 71658436 -94991860 - PB1 SINE Alu -19 108 1 4 1131 574 246 41 27 chrX 71658472 71658618 -94991678 - B1F1 SINE Alu -1 148 1 4 1131 363 272 35 17 chrX 71658626 71658742 -94991554 - PB1D7 SINE Alu 0 120 3 4 1131 987 246 142 56 chrX 71661123 71661532 -94988764 + Lx8 LINE L1 7028 7471 -2 4 1131 435 257 0 19 chrX 71661618 71661725 -94988571 + PB1D10 SINE Alu 1 105 -12 4 1131 869 195 0 7 chrX 71661819 71661969 -94988327 - B1_Mur4 SINE Alu -1 149 1 4 1131 32 0 0 0 chrX 71661978 71662010 -94988286 + AT_rich Low_complexity Low_complexity 1 32 0 4 1131 610 123 46 19 chrX 71662067 71662175 -94988121 - B1_Mur3 SINE Alu -18 131 21 4 1131 418 262 74 9 chrX 71662173 71662281 -94988015 - B1F1 SINE Alu -33 116 2 4 1131 272 322 26 9 chrX 71662362 71662478 -94987818 + L1ME2 LINE L1 3508 3625 -2521 4 1131 371 264 0 32 chrX 71662583 71662677 -94987619 + B4A SINE B4 147 237 -55 4 1131 823 203 25 59 chrX 71662720 71662924 -94987372 + B3A SINE B2 2 198 0 4 1131 880 176 0 20 chrX 71662939 71663090 -94987206 + B1_Mus1 SINE Alu 1 148 0 4 1131 305 296 0 0 chrX 71663146 71663217 -94987079 - ID4 SINE ID -6 77 7 4 1131 1754 147 88 165 chrX 71663217 71663446 -94986850 + MTC LTR MaLR 2 227 -194 4 1131 1226 35 0 0 chrX 71663446 71663590 -94986706 + B1_Mm SINE Alu 4 147 0 4 1131 1754 147 88 165 chrX 71663590 71663815 -94986481 + MTC LTR MaLR 228 421 0 4 1131 530 216 62 18 chrX 71663826 71663939 -94986357 - B1_Mur1 SINE Alu -31 118 1 4 1131 376 250 110 9 chrX 71663940 71664049 -94986247 - B1F SINE Alu -6 143 24 4 1131 21 36 0 0 chrX 71664140 71664168 -94986128 + AT_rich Low_complexity Low_complexity 1 28 0 4 1131 1226 27 7 0 chrX 71664249 71664395 -94985901 + B1_Mus2 SINE Alu 1 147 0 4 1131 974 273 66 36 chrX 71664414 71664748 -94985548 - MTEa LTR MaLR -1 378 35 4 1131 1245 54 0 0 chrX 71664823 71664970 -94985326 + B1_Mus1 SINE Alu 2 148 0 4 1131 437 197 45 45 chrX 71664987 71665141 -94985155 + L1ME2 LINE L1 4154 4307 -1839 4 1131 446 249 11 9 chrX 71665186 71665298 -94984998 + ID_B1 SINE B4 85 193 -31 4 1131 265 276 0 0 chrX 71665423 71665481 -94984815 + tRNA-Ala-GCA tRNA tRNA 11 68 -7 4 1131 947 290 137 58 chrX 71665482 71666206 -94984090 + L1ME2 LINE L1 5197 5985 -179 4 1131 699 257 0 0 chrX 71666441 71666581 -94983715 - B1F1 SINE Alu -9 140 1 4 1131 552 236 46 23 chrX 71666598 71666728 -94983568 - ID_B1 SINE B4 -1 223 91 4 1131 216 0 0 0 chrX 71666752 71666776 -94983520 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 4 1131 1286 25 0 0 chrX 71666776 71666935 -94983361 - B2_Mm1t SINE B2 -33 160 2 4 1131 325 281 9 37 chrX 71666944 71667051 -94983245 - PB1 SINE Alu -4 123 20 4 1131 730 260 5 71 chrX 71667084 71667295 -94983001 - B3A SINE B2 -1 197 1 4 1131 261 258 65 0 chrX 71667317 71667410 -94982886 + L1ME2 LINE L1 6070 6168 -5 4 1131 1290 58 121 6 chrX 71668275 71668448 -94981848 - B2_Mm2 SINE B2 -1 194 2 4 1131 987 211 82 5 chrX 71668571 71668766 -94981530 + B3 SINE B2 1 210 -6 4 1131 591 248 0 0 chrX 71668828 71668945 -94981351 + PB1D10 SINE Alu 1 117 0 4 1131 182 344 0 16 chrX 71671885 71671947 -94978349 - MIR SINE MIR -73 135 75 4 1131 321 250 12 24 chrX 71672411 71672493 -94977803 - ID4 SINE ID -1 82 2 4 1131 182 292 21 0 chrX 71672609 71672657 -94977639 - MIR SINE MIR -98 110 62 4 1131 216 0 0 0 chrX 71673668 71673692 -94976604 + (CG)n Simple_repeat Simple_repeat 1 24 0 4 1131 465 157 87 10 chrX 71674730 71674833 -94975463 + PB1D9 SINE Alu 5 115 -5 4 1131 398 255 66 0 chrX 71675413 71675519 -94974777 - PB1D7 SINE Alu -7 113 1 4 1131 469 310 103 31 chrX 71675663 71675983 -94974313 - L2 LINE L2 -381 3038 2696 4 1131 324 250 43 0 chrX 71676004 71676096 -94974200 - L1MC5 LINE L1 -49 7912 7817 4 1131 503 208 350 19 chrX 71676152 71676309 -94973987 - B3 SINE B2 -7 209 1 4 1131 232 220 0 0 chrX 71676325 71676375 -94973921 - L1MB7 LINE L1 -7 6177 6128 4 1131 388 208 130 58 chrX 71676423 71676561 -94973735 - RSINE1 SINE B4 -15 150 3 4 1131 685 231 0 0 chrX 71676608 71676738 -94973558 - B3A SINE B2 -68 130 1 4 1131 360 296 184 14 chrX 71676759 71677037 -94973259 - L2 LINE L2 -1018 2401 2077 4 1131 425 294 64 145 chrX 71677393 71677679 -94972617 - MLT1C LTR MaLR -7 460 115 4 1131 585 170 85 0 chrX 71677679 71677785 -94972511 - PB1D9 SINE Alu -5 115 1 4 1131 325 293 64 148 chrX 71677785 71677883 -94972413 - MLT1C LTR MaLR -276 114 30 4 1131 861 295 131 47 chrX 71679439 71679997 -94970299 - MER77 LTR ERVL -2 605 1 4 1131 342 305 149 6 chrX 71680224 71680399 -94969897 - MLT1C LTR MaLR -12 455 256 4 1131 592 250 15 0 chrX 71680484 71680620 -94969676 - RSINE1 SINE B4 -6 159 22 4 1131 495 137 0 38 chrX 71680667 71680773 -94969523 - L1Md_F2 LINE L1 0 6582 6481 4 1131 284 264 35 52 chrX 71680813 71680929 -94969367 - MER67B LTR ERV1 -12 649 536 4 1131 1252 48 0 0 chrX 71680937 71681084 -94969212 - B1_Mus1 SINE Alu -1 147 1 4 1131 602 295 54 11 chrX 71681099 71681284 -94969012 - B3A SINE B2 0 198 6 4 1131 444 316 173 68 chrX 71681289 71681315 -94968981 - MER67B LTR ERV1 -111 550 525 4 1131 312 296 12 0 chrX 71681315 71681396 -94968900 + ID4_ SINE ID 1 82 -1 4 1131 444 316 173 68 chrX 71681396 71681791 -94968505 - MER67B LTR ERV1 -137 524 79 4 1131 1259 91 68 0 chrX 71681791 71681967 -94968329 + B2_Mm2 SINE B2 2 189 -6 4 1131 444 316 173 68 chrX 71681967 71681988 -94968308 - MER67B LTR ERV1 -583 78 60 4 1131 1973 171 22 35 chrX 71682834 71683203 -94967093 - ORR1B2 LTR MaLR -3 364 1 4 1131 349 327 0 0 chrX 71683380 71683484 -94966812 - MER68 LTR ERVL -273 290 187 4 1131 273 309 12 0 chrX 71684878 71684959 -94965337 - ID4 SINE ID 0 83 2 4 1131 838 209 85 25 chrX 71685635 71685836 -94964460 - B3 SINE B2 0 216 4 4 1131 327 259 115 91 chrX 71685919 71686078 -94964218 - B4 SINE B4 -10 155 3 4 1131 535 236 12 14 chrX 71686094 71686217 -94964079 - ID_B1 SINE B4 -29 195 76 4 1131 613 189 142 0 chrX 71686356 71686483 -94963813 + B1_Mur3 SINE Alu 5 149 0 4 1131 22 0 0 0 chrX 71686876 71686898 -94963398 + AT_rich Low_complexity Low_complexity 1 22 0 4 1131 1159 78 0 0 chrX 71686914 71687055 -94963241 - B1_Mus1 SINE Alu -7 141 1 4 1131 540 37 12 12 chrX 71687059 71687141 -94963155 - L1Md_F2 LINE L1 0 6582 6501 4 1131 28 29 0 0 chrX 71687145 71687180 -94963116 + AT_rich Low_complexity Low_complexity 1 35 0 4 1131 1140 49 28 0 chrX 71687857 71688001 -94962295 - B1_Mus1 SINE Alu 0 148 1 4 1131 484 316 9 0 chrX 71688001 71688115 -94962181 + B3A SINE B2 50 164 -34 4 1131 195 42 0 0 chrX 71688129 71688153 -94962143 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 1131 191 295 96 45 chrX 71688324 71688480 -94961816 + L3 LINE CR1 4324 4487 -2 4 1131 11967 29 0 0 chrX 71689504 71691547 -94958749 - L1Md_T LINE L1 0 6582 4540 4 1131 1200 197 131 0 chrX 71691552 71691842 -94958454 - MTD LTR MaLR 0 419 92 4 1131 1527 204 106 44 chrX 71691836 71692347 -94957949 - MTC-int LTR MaLR -396 702 92 4 1131 546 280 181 45 chrX 71692344 71692587 -94957709 - MTD LTR MaLR -132 287 12 4 1131 327 268 121 29 chrX 71692629 71692869 -94957427 + MLT1C LTR MaLR 61 339 -128 4 1131 485 246 53 23 chrX 71692974 71693145 -94957151 + L1MB8 LINE L1 5997 6172 -6 4 1131 264 30 0 0 chrX 71695290 71695323 -94954973 + (CAA)n Simple_repeat Simple_repeat 1 33 0 4 1131 516 282 122 66 chrX 71695356 71695644 -94954652 - MLT1C LTR MaLR -122 345 42 4 1132 251 304 43 0 chrX 71697073 71697165 -94953131 - MLT1C LTR MaLR -6 461 366 4 1132 194 316 9 101 chrX 71697834 71697879 -94952417 + L2 LINE L2 2984 3024 -395 4 1132 1530 42 5 25 chrX 71697879 71698075 -94952221 - B2_Mm1a SINE B2 0 193 2 4 1132 194 316 9 101 chrX 71698075 71698138 -94952158 + L2 LINE L2 3025 3082 -337 4 1132 396 197 13 0 chrX 71698502 71698578 -94951718 - ID4_ SINE ID 0 83 7 4 1132 428 255 75 0 chrX 71698622 71698716 -94951580 - B1F1 SINE Alu -32 117 17 4 1132 354 222 37 0 chrX 71698828 71698909 -94951387 + PB1D10 SINE Alu 34 117 0 4 1132 333 316 50 0 chrX 71698909 71699048 -94951248 + L1MB7 LINE L1 5963 6108 -76 4 1132 429 113 0 0 chrX 71699207 71699278 -94951018 - Lx4A LINE L1 -2 7056 6986 4 1132 1119 128 141 15 chrX 71699843 71700042 -94950254 + URR1A DNA MER1_type 2 225 -1 4 1132 327 240 59 10 chrX 71700220 71700321 -94949975 + L1MC4 LINE L1 6825 6930 -1112 4 1132 637 280 41 36 chrX 71700587 71700783 -94949513 - B3A SINE B2 -1 197 1 4 1132 721 157 4 150 chrX 71700802 71701042 -94949254 - Lx9 LINE L1 0 7644 7440 4 1132 420 344 6 64 chrX 71701062 71701233 -94949063 - RSINE1 SINE B4 -4 161 1 4 1132 458 17 0 17 chrX 71701500 71701560 -94948736 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1132 655 206 0 0 chrX 71701562 71701688 -94948608 - B1_Mus1 SINE Alu -21 127 2 4 1132 2289 142 24 18 chrX 71701791 71702171 -94948125 + RLTR14 LTR ERV1 1 382 0 4 1132 1059 208 10 0 chrX 71702486 71702693 -94947603 + B3 SINE B2 1 209 -7 4 1132 504 306 14 7 chrX 71703076 71703224 -94947072 + B1F1 SINE Alu 1 149 0 4 1132 22 35 0 0 chrX 71703275 71703304 -94946992 + AT_rich Low_complexity Low_complexity 1 29 0 4 1132 1961 151 26 69 chrX 71703311 71703702 -94946594 - ORR1D1 LTR MaLR 0 374 1 4 1132 2775 97 52 5 chrX 71703746 71704150 -94946146 - Lx2B LINE L1 -20 6980 6558 5 1132 1745 123 18 7 chrX 71704148 71704427 -94945869 + Lx2B LINE L1 5076 5357 -520 5 1132 4339 130 44 13 chrX 71704427 71705128 -94945168 + Lx2B LINE L1 6276 6998 -2 5 1132 5846 123 46 14 chrX 71705123 71706297 -94943999 + Lx2B LINE L1 5359 6558 -442 5 1132 206 318 8 60 chrX 71706327 71706461 -94943835 + CT-rich Low_complexity Low_complexity 2 128 0 5 1132 354 239 44 54 chrX 71706526 71706654 -94943642 + L1M2 LINE L1 5628 5753 -547 5 1132 441 0 0 0 chrX 71706884 71706933 -94943363 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1132 219 227 0 0 chrX 71706936 71707002 -94943294 + (CATATA)n Simple_repeat Simple_repeat 4 69 0 5 1132 456 244 61 6 chrX 71707191 71707356 -94942940 + L1MA4 LINE L1 5716 5889 -411 5 1132 232 301 38 19 chrX 71707518 71707623 -94942673 + L2 LINE L2 2798 2904 -515 5 1132 258 290 14 0 chrX 71707726 71707795 -94942501 - L2a LINE L2 -54 3372 3303 5 1132 1613 258 133 9 chrX 71707797 71708325 -94941971 + Lx8 LINE L1 6881 7473 0 5 1132 21 0 0 0 chrX 71708483 71708504 -94941792 + AT_rich Low_complexity Low_complexity 1 21 0 5 1132 375 108 14 0 chrX 71708547 71708612 -94941684 - B2_Mm2 SINE B2 -82 116 46 5 1132 1155 100 47 0 chrX 71708658 71708828 -94941468 - B2_Mm1t SINE B2 -14 179 2 5 1132 1695 281 25 50 chrX 71708828 71709545 -94940751 + L1M3 LINE L1 3477 4175 -1965 5 1132 211 368 0 0 chrX 71709594 71709662 -94940634 - PB1D10 SINE Alu -29 88 21 5 1132 353 284 22 45 chrX 71709712 71709847 -94940449 + B1F SINE Alu 1 131 -18 5 1132 243 0 0 0 chrX 71709855 71709882 -94940414 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 1132 2073 238 54 15 chrX 71709948 71710559 -94939737 + L1_Rod LINE L1 451 955 -6653 5 1132 1196 141 3 120 chrX 71710559 71710624 -94939672 + L1_Rod LINE L1 1107 1168 -6440 5 1132 1107 51 0 0 chrX 71710624 71710761 -94939535 + B1_Mus1 SINE Alu 1 137 -11 5 1132 311 61 41 0 chrX 71710761 71710810 -94939486 + (CAAA)n Simple_repeat Simple_repeat 3 53 0 5 1132 1196 141 3 120 chrX 71710810 71710948 -94939348 + L1_Rod LINE L1 1169 1303 -6305 5 1132 1690 21 5 0 chrX 71710948 71711139 -94939157 + B2_Mm1t SINE B2 2 193 0 5 1132 1196 125 26 121 chrX 71711139 71711298 -94938998 + L1_Rod LINE L1 1304 1441 -4406 5 1132 414 0 0 0 chrX 71711316 71711362 -94938934 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1132 1814 100 62 20 chrX 71711364 71711670 -94938626 - ORR1A2 LTR MaLR -8 319 1 5 1132 9915 127 63 27 chrX 71711670 71712544 -94937752 - ORR1A2-int LTR MaLR 0 1963 1088 5 1132 2392 90 0 15 chrX 71712544 71712871 -94937425 - L1_Mus2 LINE L1 0 6566 6245 5 1132 9915 127 63 27 chrX 71712871 71713891 -94936405 - ORR1A2-int LTR MaLR -876 1087 1 5 1132 1096 48 7 0 chrX 71713891 71714038 -94936258 - ORR1A2 LTR MaLR 0 327 180 5 1132 6597 91 39 3 chrX 71714040 71714966 -94935330 + L1_Mus3 LINE L1 5674 6632 -6 5 1132 441 303 8 32 chrX 71715044 71715170 -94935126 + RSINE1 SINE B4 43 165 0 5 1132 498 286 81 16 chrX 71715178 71715501 -94934795 + L1_Mur3 LINE L1 1375 1718 -4162 5 1132 852 267 46 9 chrX 71715515 71715814 -94934482 + L1_Mur3 LINE L1 2429 2757 -3386 5 1132 1102 149 5 30 chrX 71715814 71716015 -94934281 + ORR1B1 LTR MaLR 1 196 -198 5 1132 2901 35 3 14 chrX 71716024 71716374 -94933922 - ORR1A0 LTR MaLR 0 346 1 5 1132 11948 49 7 105 chrX 71716374 71718362 -94931934 - ORR1A0-int LTR MaLR 0 1792 1 5 1132 3029 20 3 11 chrX 71718362 71718711 -94931585 - ORR1A0 LTR MaLR 0 346 1 5 1132 1147 162 15 5 chrX 71718726 71718931 -94931365 + ORR1B1 LTR MaLR 185 391 -3 5 1132 393 294 0 0 chrX 71718932 71719058 -94931238 + L1_Mur3 LINE L1 2751 2876 -3267 5 1132 511 219 134 0 chrX 71719060 71719179 -94931117 - ID_B1 SINE B4 -6 218 84 5 1132 350 265 68 6 chrX 71719181 71719349 -94930947 + L1_Mur3 LINE L1 2864 3047 -3099 5 1132 472 301 52 155 chrX 71719349 71719581 -94930715 + B4A SINE B4 2 209 -83 5 1132 332 278 9 53 chrX 71719736 71719850 -94930446 + RSINE1 SINE B4 8 116 -49 5 1132 389 315 19 47 chrX 71719906 71720216 -94930080 + L1_Mur3 LINE L1 3253 3574 -2566 5 1132 804 300 85 28 chrX 71720303 71720763 -94929533 + L1_Rod LINE L1 5352 5837 -10 5 1132 21 71 0 0 chrX 71720774 71720816 -94929480 + AT_rich Low_complexity Low_complexity 1 42 0 5 1132 1383 122 5 5 chrX 71721120 71721335 -94928961 + MusHAL1 LINE L1 1442 1656 -1056 5 1132 419 317 0 0 chrX 71723526 71723646 -94926650 + ID_B1 SINE B4 102 221 -3 5 1132 23 33 0 0 chrX 71724188 71724218 -94926078 + AT_rich Low_complexity Low_complexity 1 30 0 5 1132 781 154 6 6 chrX 71724435 71724598 -94925698 + GA-rich Low_complexity Low_complexity 3 165 0 5 1132 865 18 35 0 chrX 71724781 71724894 -94925402 + (GAAAA)n Simple_repeat Simple_repeat 5 121 0 5 1132 312 27 0 0 chrX 71725076 71725113 -94925183 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 5 1132 218 167 0 0 chrX 71726946 71726982 -94923314 + G-rich Low_complexity Low_complexity 1 36 0 5 1132 1405 244 134 20 chrX 71728182 71728675 -94921621 - RMER15 LTR ERVL 0 575 27 5 1132 230 236 36 0 chrX 71728698 71728753 -94921543 - RMER15 LTR ERVL -515 60 4 5 1132 189 74 0 0 chrX 71729439 71729466 -94920830 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 5 1132 3020 35 0 0 chrX 71729629 71729975 -94920321 - ORR1A1 LTR MaLR 0 346 1 5 1132 938 262 95 19 chrX 71730285 71730424 -94919872 - L1MA4 LINE L1 -378 5922 5785 5 1132 603 102 0 0 chrX 71730424 71730512 -94919784 + (CA)n Simple_repeat Simple_repeat 2 89 0 5 1132 938 262 95 19 chrX 71730512 71730784 -94919512 - L1MA4 LINE L1 -516 5784 5482 5 1132 2346 178 35 20 chrX 71730812 71731322 -94918974 + RLTR12B LTR ERVK 1 518 -10 5 1132 2874 74 2 20 chrX 71731343 71731741 -94918555 - Lx LINE L1 -12 6642 6252 5 1132 3365 105 9 11 chrX 71733567 71734099 -94916197 - RLTR13D2 LTR ERVK 0 1023 493 5 1132 256 307 0 22 chrX 71734626 71734716 -94915580 + Lx7 LINE L1 6667 6754 -942 5 1132 945 202 85 10 chrX 71735250 71735450 -94914846 - B3 SINE B2 -1 215 1 5 1132 488 273 12 41 chrX 71735945 71736117 -94914179 + RNLTR23 LTR ERVK 476 642 0 5 1132 264 314 5 14 chrX 71736261 71736403 -94913893 - L1MC LINE L1 -1839 4307 4167 5 1132 576 160 40 0 chrX 71736812 71736912 -94913384 + RSINE1 SINE B4 10 113 -52 5 1132 432 0 0 0 chrX 71736935 71736983 -94913313 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1132 588 84 12 24 chrX 71737358 71737443 -94912853 - L1_Mur2 LINE L1 -1116 4770 4687 5 1132 4367 164 61 13 chrX 71737443 71738292 -94912004 + RMER19B LTR ERVK 1 890 -12 5 1132 1235 163 0 65 chrX 71738305 71738395 -94911901 - L1_Mur2 LINE L1 -1194 4683 4610 5 1132 900 85 28 21 chrX 71738395 71738540 -94911756 + L1Md_F2 LINE L1 6437 6582 0 5 1132 1235 180 1 67 chrX 71738540 71738742 -94911554 - L1_Mur2 LINE L1 -1503 4640 4438 5 1132 1438 33 65 0 chrX 71739425 71739609 -94910687 + L1Md_F2 LINE L1 6375 6570 -12 5 1132 369 129 43 0 chrX 71740358 71740428 -94909868 - L1_Mur2 LINE L1 -1435 4442 4370 5 1132 358 138 113 52 chrX 71740398 71740513 -94909783 + L1_Mur1 LINE L1 4749 4870 -1016 5 1132 3851 180 21 13 chrX 71740498 71741350 -94908946 + Lx3C LINE L1 6000 6974 -2 5 1132 205 146 0 40 chrX 71741446 71741496 -94908800 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 5 1132 2238 37 0 4 chrX 71741516 71741786 -94908510 - L1Md_F3 LINE L1 0 6584 6316 5 1132 636 265 94 60 chrX 71741788 71741989 -94908307 - B3A SINE B2 -8 208 1 5 1132 381 22 0 0 chrX 71742506 71742552 -94907744 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1132 188 161 47 39 chrX 71742761 71742890 -94907406 + (TATAA)n Simple_repeat Simple_repeat 5 134 0 5 1132 29 28 0 0 chrX 71742915 71742951 -94907345 + AT_rich Low_complexity Low_complexity 1 36 0 5 1132 1264 47 0 0 chrX 71743328 71743476 -94906820 + B1_Mus1 SINE Alu 1 148 0 5 1132 553 55 0 0 chrX 71743638 71743711 -94906585 + L1Md_A LINE L1 6510 6582 0 5 1132 6117 276 44 34 chrX 71744042 71746024 -94904272 + MYSERV6-int LTR ERVK 625 2627 -6332 5 1132 68 48 0 23 chrX 71746026 71746155 -94904141 + AT_rich Low_complexity Low_complexity 1 126 0 5 1132 4405 203 29 23 chrX 71746157 71746906 -94903390 + MYSERV6-int LTR ERVK 2603 3350 -5609 5 1132 3830 47 19 8 chrX 71746906 71747376 -94902920 + MT2C_Mm LTR ERVL 1 475 0 5 1132 4405 203 29 23 chrX 71747376 71747570 -94902726 + MYSERV6-int LTR ERVK 3351 3551 -5408 5 1132 5329 212 16 19 chrX 71748060 71749333 -94900963 + MYSERV6-int LTR ERVK 3326 4615 -4344 5 1132 2151 107 232 43 chrX 71749734 71750195 -94900101 - RLTR6_Mm LTR ERV1 -70 584 37 5 1132 16856 12 1 2 chrX 71750304 71752147 -94898149 - RLTR6-int LTR ERV1 0 7778 5937 5 1132 1213 158 0 5 chrX 71752147 71752338 -94897958 + Lx2A LINE L1 6228 6417 -591 5 1132 4245 126 1 20 chrX 71752336 71753023 -94897273 - L1_Mur2 LINE L1 -1581 4296 3623 5 1132 551 231 31 71 chrX 71753005 71753169 -94897127 + L1M5 LINE L1 5579 5745 -434 5 1132 1378 89 21 0 chrX 71753169 71753359 -94896937 + B2_Mm2 SINE B2 2 195 0 5 1132 551 275 31 75 chrX 71753359 71753429 -94896867 + L1M5 LINE L1 5746 5801 -373 5 1132 1025 64 0 0 chrX 71753639 71753779 -94896517 + B1_Mus2 SINE Alu 2 141 -6 5 1132 1493 286 93 18 chrX 71754131 71754863 -94895433 - L1_Mur3 LINE L1 -255 5625 4839 5 1132 2450 92 6 0 chrX 71754871 71755196 -94895100 + ORR1A2 LTR MaLR 1 327 0 5 1132 4518 168 32 22 chrX 71755207 71756167 -94894129 - Lx2B LINE L1 0 6997 5949 5 1132 4346 21 0 0 chrX 71757701 71758183 -94892113 - LTRIS_Mm LTR ERV1 0 482 1 5 1132 26899 37 8 18 chrX 71758183 71761422 -94888874 - MuRRS-int LTR ERV1 0 4690 1484 5 1132 405 19 0 0 chrX 71761428 71761481 -94888815 - LTRIS_Mm LTR ERV1 -429 53 1 5 1132 1500 39 44 0 chrX 71762426 71762630 -94887666 + MT2C_Mm LTR ERVL 1 213 -262 5 1132 2831 159 75 43 chrX 71762630 71763405 -94886891 - RLTR13D1 LTR ERVK 0 855 199 5 1132 2641 26 0 0 chrX 71763414 71763718 -94886578 - L1Md_F2 LINE L1 -13 6569 6266 5 1132 6297 130 23 10 chrX 71763718 71764753 -94885543 - L1_Mur2 LINE L1 -645 5232 4184 5 1132 2176 145 9 3 chrX 71764757 71765102 -94885194 - Lx2B LINE L1 0 5877 5531 5 1132 1777 176 3 0 chrX 71765132 71765462 -94884834 - Lx2B LINE L1 -1705 4172 3842 5 1132 30563 85 8 22 chrX 71765459 71769336 -94880960 - L1Md_T LINE L1 0 6582 2804 5 1132 1483 74 16 0 chrX 71769336 71769526 -94880770 - B2_Mm2 SINE B2 -2 193 1 5 1132 30563 101 11 30 chrX 71769526 71771119 -94879177 - L1Md_T LINE L1 -3080 2803 1204 5 1132 2119 125 33 57 chrX 71771125 71771514 -94878782 - MusHAL1 LINE L1 -2780 574 195 5 1132 195 42 0 0 chrX 71771571 71771595 -94878701 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 5 1132 551 272 14 14 chrX 71771595 71771733 -94878563 - B1_Mus1 SINE Alu -9 139 2 5 1132 307 278 90 35 chrX 71771747 71771948 -94878348 - Lx7 LINE L1 -15 7681 7470 5 1132 366 107 0 0 chrX 71771948 71772004 -94878292 + (GGA)n Simple_repeat Simple_repeat 2 57 0 5 1132 365 58 19 0 chrX 71771997 71772049 -94878247 + (GAAA)n Simple_repeat Simple_repeat 4 56 0 5 1132 537 226 37 30 chrX 71772098 71772262 -94878034 - Lx7 LINE L1 -363 7333 7169 5 1132 360 182 27 18 chrX 71772340 71772452 -94877844 + C-rich Low_complexity Low_complexity 2 114 0 5 1132 221 149 0 41 chrX 71772482 71772531 -94877765 + CT-rich Low_complexity Low_complexity 3 49 0 5 1132 407 279 27 16 chrX 71772531 71772662 -94877634 - B1_Mur2 SINE Alu -5 145 17 5 1132 360 17 49 33 chrX 71772688 71772749 -94877547 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 6 1132 631 22 66 0 chrX 71773055 71773146 -94877150 + BGLII LTR ERVK 1 97 -324 6 1132 265 91 23 0 chrX 71773140 71773184 -94877112 + BGLII LTR ERVK 377 421 0 6 1132 596 96 48 0 chrX 71773584 71773694 -94876602 + RMER3D-int LTR ERVK 489 583 -2259 6 1132 263 311 27 0 chrX 71773694 71773768 -94876528 + G-rich Low_complexity Low_complexity 4 79 0 6 1132 2653 181 83 71 chrX 71773815 71774489 -94875807 + RMER3D-int LTR ERVK 1015 1696 -1146 6 1132 3401 201 39 45 chrX 71774488 71775403 -94874893 + RMER3D-int LTR ERVK 1925 2834 -8 6 1132 2851 77 0 12 chrX 71775403 71775823 -94874473 + BGLII LTR ERVK 7 421 0 6 1132 1576 100 8 56 chrX 71776925 71777191 -94873105 + RLTR9B2 LTR ERVK 1 253 -167 6 1132 6014 63 3 3 chrX 71777275 71778036 -94872260 - L1Md_F2 LINE L1 0 6582 5822 6 1132 11962 25 3 7 chrX 71778036 71779615 -94870681 + MERVL-int LTR ERVL 221 1832 -3653 6 1132 925 38 0 0 chrX 71779624 71779730 -94870566 + U6 snRNA snRNA 2 107 0 6 1132 2168 32 0 0 chrX 71779730 71780010 -94870286 + L1_Mm LINE L1 2024 2303 -3580 6 1132 4488 10 0 0 chrX 71780010 71780503 -94869793 + MT2_Mm LTR ERVL 1 493 0 6 1132 45347 14 6 0 chrX 71780503 71785829 -94864467 + MERVL-int LTR ERVL 1 5360 -125 6 1132 383 167 46 35 chrX 71785829 71785916 -94864380 + ORR1A3-int LTR MaLR 553 640 -1323 6 1132 302 0 0 0 chrX 71785916 71785954 -94864342 + MERVL-int LTR ERVL 5448 5485 0 6 1132 4488 10 0 0 chrX 71785954 71786447 -94863849 + MT2_Mm LTR ERVL 1 493 0 6 1132 25146 43 7 0 chrX 71786447 71789712 -94860584 + L1Md_F3 LINE L1 2299 5586 -297 6 1132 7863 44 13 0 chrX 71789712 71790683 -94859613 + L1Md_F3 LINE L1 5587 6570 -14 6 1132 1346 39 0 68 chrX 71790683 71790875 -94859421 + ORR1A0 LTR MaLR 168 346 0 6 1132 24675 129 9 64 chrX 71790875 71795143 -94855153 + L1_Mus3 LINE L1 969 5118 -765 6 1132 1488 46 0 0 chrX 71795143 71795317 -94854979 - B2_Mm1t SINE B2 -19 174 1 6 1132 24675 134 10 70 chrX 71795317 71795339 -94854957 + L1_Mus3 LINE L1 5119 5119 -764 6 1132 5437 65 1 1 chrX 71795339 71796030 -94854266 - L1_Mus1 LINE L1 0 6567 5877 6 1132 24675 106 27 30 chrX 71796030 71797668 -94852628 + L1_Mus3 LINE L1 5119 6634 -4 6 1132 4059 154 18 3 chrX 71797687 71798430 -94851866 - L1_Mur2 LINE L1 -949 4928 4175 6 1132 3102 37 0 0 chrX 71798430 71798784 -94851512 + IAPEY2_LTR LTR ERVK 1 354 -3 6 1132 8788 128 12 23 chrX 71798784 71800419 -94849877 + IAPEY3-int LTR ERVK 17 1982 -5698 6 1132 3173 67 12 2 chrX 71800402 71800834 -94849462 + IAPEY3-int LTR ERVK 2244 2679 -5001 6 1132 574 42 0 0 chrX 71800821 71800892 -94849404 + IAPEY3-int LTR ERVK 2619 2689 -4991 6 1132 187 377 44 0 chrX 71800907 71801021 -94849275 + L3b LINE CR1 335 453 -29 6 1132 2714 122 15 31 chrX 71801021 71801677 -94848619 + IAPEY3-int LTR ERVK 6984 7581 0 6 1132 3082 40 0 0 chrX 71801677 71802031 -94848265 + IAPEY2_LTR LTR ERVK 1 354 -3 6 1132 8900 148 17 7 chrX 71802033 71803695 -94846601 - L1_Mur2 LINE L1 -1694 4183 2505 6 1132 1708 166 35 25 chrX 71803941 71804256 -94846040 + RMER19A LTR ERVK 1 318 -419 6 1132 662 125 19 89 chrX 71804254 71804393 -94845903 - RMER19C LTR ERVK -555 182 1 6 1132 846 255 65 25 chrX 71805192 71805437 -94844859 - MER2 DNA MER2_type 0 345 91 6 1132 252 0 0 0 chrX 71806055 71806083 -94844213 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1132 645 88 0 0 chrX 71806083 71806184 -94844112 + (GA)n Simple_repeat Simple_repeat 1 102 0 6 1132 188 341 35 35 chrX 71806900 71806985 -94843311 - MIRb SINE MIR -11 257 173 6 1132 1316 35 12 6 chrX 71807236 71807409 -94842887 + L1Md_A LINE L1 6408 6581 -1 6 1132 373 325 42 51 chrX 71807493 71807804 -94842492 - RMER15-int LTR ERVL -1240 3759 3452 6 1132 666 0 0 0 chrX 71807880 71807954 -94842342 + (TTCCC)n Simple_repeat Simple_repeat 1 74 0 6 1132 213 39 0 0 chrX 71808187 71808213 -94842083 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1132 1242 48 0 0 chrX 71808213 71808360 -94841936 - B1_Mm SINE Alu 0 147 1 6 1132 315 305 30 15 chrX 71808515 71808648 -94841648 - RMER15-int LTR ERVL -2286 2713 2579 6 1132 2149 170 44 10 chrX 71808891 71809277 -94841019 + MTD LTR MaLR 9 407 -12 6 1132 596 299 61 49 chrX 71809286 71809631 -94840665 - RMER15-int LTR ERVL -2674 2325 1977 6 1132 4152 129 52 16 chrX 71809683 71810375 -94839921 - Lx2B LINE L1 -15 6985 6269 6 1132 2154 132 0 38 chrX 71810406 71810746 -94839550 - ORR1A2 LTR MaLR 0 327 1 6 1132 682 320 130 5 chrX 71812021 71812228 -94838068 + B4 SINE B4 1 233 -59 6 1132 4180 33 0 0 chrX 71813143 71813628 -94836668 + L1Md_T LINE L1 6096 6580 -2 6 1132 380 343 92 17 chrX 71815082 71815260 -94835036 - L2c LINE L2 -12 3375 3153 6 1132 1075 252 5 0 chrX 71818151 71818361 -94831935 + B3 SINE B2 6 216 0 6 1132 542 234 47 8 chrX 71819327 71819456 -94830840 + B1F1 SINE Alu 3 136 -13 6 1132 444 104 0 0 chrX 71819456 71819523 -94830773 + (CA)n Simple_repeat Simple_repeat 2 68 0 6 1132 480 62 0 0 chrX 71819535 71819599 -94830697 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 1132 21 57 0 0 chrX 71819736 71819771 -94830525 + AT_rich Low_complexity Low_complexity 1 35 0 6 1132 387 94 0 0 chrX 71820694 71820798 -94829498 - L1_Mus4 LINE L1 0 6636 6559 6 1132 855 93 20 13 chrX 71820809 71821014 -94829282 - L1_Mus4 LINE L1 0 6636 6469 6 1132 1185 61 0 0 chrX 71821479 71821617 -94828679 + B1_Mus1 SINE Alu 1 138 -10 6 1132 252 0 0 0 chrX 71821617 71821645 -94828651 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 6 1132 1763 154 0 26 chrX 71823398 71823704 -94826592 + Lx3C LINE L1 6673 6970 -6 6 1132 7210 62 2 19 chrX 71823723 71825008 -94825288 + L1_Mus2 LINE L1 5303 6564 -2 6 1132 1960 198 134 74 chrX 71825176 71825403 -94824893 - Lx5 LINE L1 -1693 6003 5732 6 1132 1234 99 5 21 chrX 71825403 71825589 -94824707 - B2_Mm1t SINE B2 -9 184 2 6 1132 1960 172 8 84 chrX 71825589 71825998 -94824298 - Lx5 LINE L1 -146 5731 5334 6 1132 7901 106 38 2 chrX 71826000 71826113 -94824183 + L1_Mus2 LINE L1 4589 4731 -1152 6 1132 474 18 0 0 chrX 71826113 71826168 -94824128 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 6 141 7901 86 39 1 chrX 71826168 71827954 -94822342 + L1_Mus2 LINE L1 4732 6565 -1 6 1133 263 145 39 13 chrX 71827972 71828049 -94822247 - Lx5 LINE L1 -547 5330 5252 6 1133 3921 134 9 0 chrX 71828027 71828705 -94821591 - Lx5 LINE L1 -1500 4377 3694 6 1133 3880 84 84 0 chrX 71828713 71829259 -94821037 - Lx3_Mus LINE L1 0 7009 6418 6 1133 3508 79 37 1 chrX 71829260 71829911 -94820385 - Lx3_Mus LINE L1 -868 6141 5465 6 1133 15304 97 15 8 chrX 71829983 71833049 -94817247 - L1VL4 LINE L1 -281 3278 199 6 1133 5303 140 39 1 chrX 71833049 71833930 -94816366 - Lx3_Mus LINE L1 -866 5011 4098 6 1133 9381 168 31 16 chrX 71833921 71834958 -94815338 - Lx3_Mus LINE L1 -2788 3092 2056 6 1133 270 0 0 0 chrX 71834958 71834988 -94815308 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1133 438 20 0 0 chrX 71834988 71835038 -94815258 + (GA)n Simple_repeat Simple_repeat 1 51 0 6 1133 9381 169 29 25 chrX 71835038 71835931 -94814365 - Lx3_Mus LINE L1 -3825 2055 1181 6 1133 4334 196 22 6 chrX 71835931 71836717 -94813579 - Lx5 LINE L1 -3 7047 6250 6 1133 1699 173 7 115 chrX 71836717 71836950 -94813346 - Lx3_Mus LINE L1 -6548 1180 948 6 1133 2119 138 92 18 chrX 71836954 71837346 -94812950 - MTC LTR MaLR 0 421 1 6 1133 2054 236 136 77 chrX 71842056 71842997 -94807299 + RMER12 LTR ERVK 4 1001 -321 6 1133 633 27 0 0 chrX 71842997 71843072 -94807224 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 6 1133 2054 236 136 77 chrX 71843072 71843376 -94806920 + RMER12 LTR ERVK 1002 1321 -1 6 1133 902 75 15 0 chrX 71844011 71844145 -94806151 + RLTR11B LTR ERVK 318 453 0 6 1133 919 80 15 0 chrX 71844922 71845059 -94805237 + RLTR11A LTR ERVK 388 526 -2 6 1133 1066 184 18 28 chrX 71845194 71845412 -94804884 + B3 SINE B2 1 216 0 6 1133 195 43 61 61 chrX 71845614 71845663 -94804633 + (TTTG)n Simple_repeat Simple_repeat 3 51 0 6 1133 2227 172 20 2 chrX 71845667 71846069 -94804227 + MTD LTR MaLR 3 411 -8 6 1133 225 0 0 0 chrX 71846180 71846205 -94804091 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 6 1133 942 140 0 0 chrX 71846205 71846341 -94803955 - B1_Mur3 SINE Alu -13 136 1 6 1133 422 291 30 6 chrX 71846526 71846692 -94803604 - L1MD3 LINE L1 -9 7986 7817 6 1133 215 217 86 14 chrX 71846723 71846793 -94803503 + MIRb SINE MIR 188 262 -6 6 1133 637 234 16 0 chrX 71847010 71847138 -94803158 - RSINE1 SINE B4 -33 132 3 6 1133 1662 231 221 19 chrX 71847148 71847682 -94802614 - Lx5 LINE L1 -1 7459 6818 6 1133 3294 157 81 24 chrX 71847697 71848689 -94801607 - Lx5 LINE L1 -673 6377 5332 6 1133 2900 54 84 8 chrX 71848691 71849082 -94801214 + BGLII LTR ERVK 1 421 0 6 1133 588 78 55 11 chrX 71849483 71849574 -94800722 + RMER3D-int LTR ERVK 489 583 -2259 6 1133 845 196 83 44 chrX 71849586 71850044 -94800252 + RMER3D-int LTR ERVK 489 1085 -6321 6 1133 2096 150 102 20 chrX 71850082 71850584 -94799712 + RMER3D-int LTR ERVK 1014 1533 -1309 6 1133 3549 201 37 45 chrX 71850624 71851706 -94798590 + RMER3D-int LTR ERVK 1541 2841 -1 6 1133 3139 63 12 17 chrX 71851707 71852128 -94798168 + BGLII LTR ERVK 1 419 -2 6 1133 4315 43 4 2 chrX 71852128 71852639 -94797657 - RLTR1B LTR ERV1 0 512 1 6 1133 942 159 162 0 chrX 71852645 71852898 -94797398 - Lx5 LINE L1 -544 5336 5043 6 1133 326 266 223 0 chrX 71852899 71853038 -94797258 - L1MD3 LINE L1 -174 7821 7652 6 1133 232 243 26 26 chrX 71853097 71853173 -94797123 - L1MD3 LINE L1 -330 7665 7590 6 1133 269 313 43 9 chrX 71853300 71853416 -94796880 - ID_B1 SINE B4 0 224 105 6 1133 272 83 21 0 chrX 71853746 71853794 -94796502 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 1133 922 121 200 0 chrX 71853794 71853984 -94796312 - RMER5 LTR ERV1 -20 514 287 6 1133 3665 89 136 2 chrX 71854093 71854623 -94795673 - MT2B LTR ERVL 0 601 1 6 1133 801 272 30 8 chrX 71854627 71854864 -94795432 - MER2 DNA MER2_type -13 332 91 6 1133 848 235 46 5 chrX 71855041 71855238 -94795058 + ID_B1 SINE B4 10 214 -10 6 1133 360 0 0 0 chrX 71855238 71855278 -94795018 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1133 295 141 125 0 chrX 71855373 71855437 -94794859 + ORR1A4 LTR MaLR 1 72 -257 6 1133 304 266 12 12 chrX 71855439 71855519 -94794777 - B1F1 SINE Alu -66 83 4 6 1133 305 345 104 20 chrX 71855655 71855856 -94794440 + B4A SINE B4 57 274 -18 6 1133 279 54 0 0 chrX 71855859 71855896 -94794400 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1133 404 281 24 24 chrX 71856002 71856126 -94794170 - B3 SINE B2 -27 189 66 6 1133 811 252 42 61 chrX 71856131 71856393 -94793903 + Lx6 LINE L1 7195 7451 -9 6 1133 332 301 32 32 chrX 71856467 71856625 -94793671 + L1M4 LINE L1 657 814 -5728 6 1133 882 257 48 0 chrX 71856671 71856877 -94793419 - B3 SINE B2 0 216 1 6 1133 231 200 82 41 chrX 71856918 71856991 -94793305 + MTE2a LTR MaLR 285 360 -19 6 1133 4895 155 44 45 chrX 71857309 71858190 -94792106 - Lx5 LINE L1 -3 7047 6168 6 1133 1093 68 0 0 chrX 71858191 71858324 -94791972 + L1_Mur2 LINE L1 5534 5666 -211 6 1133 452 187 150 31 chrX 71858327 71858487 -94791809 + Lx5 LINE L1 5974 6152 -898 6 1133 1226 268 60 31 chrX 71858551 71858967 -94791329 - RodERV21-int LTR ERV1 -4105 886 459 6 1133 5649 67 5 9 chrX 71858976 71859790 -94790506 + RLTR22_Mus LTR ERVK 1 811 -997 6 1133 8746 20 0 0 chrX 71859935 71861162 -94789134 - L1Md_T LINE L1 0 6582 5356 6 1133 38722 29 0 0 chrX 71861167 71867618 -94782678 - L1Md_T LINE L1 0 6585 38 6 1133 4036 11 2 0 chrX 71867619 71868077 -94782219 - L1_Mm LINE L1 -516 5367 4909 6 1133 419 278 43 78 chrX 71868219 71868449 -94781847 + RMER12 LTR ERVK 1101 1322 0 6 1133 429 298 65 40 chrX 71868459 71868658 -94781638 - RodERV21-int LTR ERV1 -4787 204 1 6 1133 1055 58 40 0 chrX 71869136 71869309 -94780987 + (GA)n Simple_repeat Simple_repeat 1 180 0 7 1133 235 279 104 104 chrX 71869620 71869764 -94780532 - RLTR18 LTR ERVK -127 489 346 7 1133 1599 257 83 57 chrX 71870320 71871216 -94779080 + RMER1A Other Other 1 536 -530 7 1133 2463 220 172 9 chrX 71871308 71872282 -94778014 + RMER1B Other Other 1 1062 -4 7 1133 371 358 70 37 chrX 71872387 71872628 -94777668 - RLTR18 LTR ERVK -335 281 33 7 1133 592 294 0 0 chrX 71872864 71873027 -94777269 + B3A SINE B2 2 164 -34 7 1133 688 255 40 87 chrX 71874618 71874701 -94775595 + RMER17B LTR ERVK 310 398 -560 7 1133 564 56 0 0 chrX 71874701 71874773 -94775523 + (TTCTC)n Simple_repeat Simple_repeat 1 72 0 7 1133 688 255 40 87 chrX 71874773 71874964 -94775332 + RMER17B LTR ERVK 399 571 -387 7 1133 278 194 15 0 chrX 71875584 71875651 -94774645 + (TG)n Simple_repeat Simple_repeat 1 68 0 7 1133 3088 253 107 60 chrX 71876014 71876451 -94773845 + ORR1D2-int LTR MaLR 176 602 -768 7 1133 333 0 0 0 chrX 71876451 71876488 -94773808 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1133 468 0 0 0 chrX 71876488 71876539 -94773757 + (GA)n Simple_repeat Simple_repeat 1 52 0 7 1133 3088 253 107 60 chrX 71876539 71877241 -94773055 + ORR1D2-int LTR MaLR 603 1369 -1 7 1133 510 230 0 17 chrX 71877244 71877359 -94772937 + ORR1D2 LTR MaLR 4 116 -254 7 1133 11922 68 0 7 chrX 71878244 71880913 -94769383 + L1Md_Gf LINE L1 30 2776 -3110 7 1133 461 255 38 0 chrX 71880913 71881019 -94769277 + ID_B1 SINE B4 115 224 0 7 1133 1162 33 0 43 chrX 71881251 71881439 -94768857 + (GA)n Simple_repeat Simple_repeat 1 180 0 7 1133 915 300 8 0 chrX 71881742 71881992 -94768304 + B4 SINE B4 25 276 -16 7 1133 272 190 13 0 chrX 71882050 71882129 -94768167 + (CA)n Simple_repeat Simple_repeat 1 80 0 7 1133 204 122 0 0 chrX 71882740 71882781 -94767515 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1133 320 267 100 27 chrX 71882936 71883086 -94767210 + L1_Rod LINE L1 2454 2614 -3233 7 1133 537 124 0 0 chrX 71883361 71883458 -94766838 + (TC)n Simple_repeat Simple_repeat 2 98 0 7 1133 739 300 28 38 chrX 71883482 71883770 -94766526 + B4A SINE B4 8 292 0 7 1133 335 187 0 9 chrX 71883819 71883927 -94766369 + (CA)n Simple_repeat Simple_repeat 2 108 0 7 1133 215 230 26 51 chrX 71886328 71886406 -94763890 - SUBTEL_sa Satellite Satellite -90 84 9 7 1133 2649 34 178 0 chrX 71887641 71887990 -94762306 + IAPLTR2a LTR ERVK 1 411 0 7 1133 990 48 0 0 chrX 71888406 71888530 -94761766 + (TC)n Simple_repeat Simple_repeat 1 124 0 7 1133 383 0 21 0 chrX 71888530 71888577 -94761719 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1133 180 280 67 0 chrX 71889977 71890052 -94760244 - L4 LINE RTE -1105 924 845 7 1133 400 287 14 56 chrX 71891311 71891455 -94758841 - ORR1D2 LTR MaLR -231 139 2 7 1133 336 48 0 0 chrX 71891471 71891513 -94758783 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 1133 181 170 0 54 chrX 71891513 71891569 -94758727 + GA-rich Low_complexity Low_complexity 3 55 0 7 1133 881 122 24 6 chrX 71891581 71891746 -94758550 + GA-rich Low_complexity Low_complexity 1 168 0 7 1133 493 120 42 17 chrX 71891759 71891878 -94758418 + GA-rich Low_complexity Low_complexity 2 123 0 7 1133 3344 113 14 10 chrX 71894198 71894690 -94755606 + RLTR19A LTR ERVK 3 496 0 7 1133 231 213 0 21 chrX 71895647 71895695 -94754601 + GA-rich Low_complexity Low_complexity 4 50 0 7 1133 1136 221 63 54 chrX 71896609 71896959 -94753337 - RMER13A LTR ERVK -405 455 103 7 1133 846 208 90 24 chrX 71897123 71897335 -94752961 - RLTR18B LTR ERVK -286 226 1 7 1133 287 258 74 116 chrX 71899232 71899421 -94750875 + RMER15 LTR ERVL 286 466 -109 7 1133 1918 117 0 7 chrX 71899568 71899853 -94750443 + L1Md_F2 LINE L1 6293 6575 -7 7 1133 629 235 25 0 chrX 71900702 71900821 -94749475 + ID_B1 SINE B4 103 224 0 7 1133 244 384 56 6 chrX 71902507 71902685 -94747611 + MIR SINE MIR 8 194 -68 7 1133 233 265 23 46 chrX 71904700 71904787 -94745509 + MER34 LTR ERV1 78 162 -380 7 1133 540 263 32 69 chrX 71905655 71905843 -94744453 - B3A SINE B2 -4 212 32 7 1133 860 156 96 43 chrX 71906191 71906379 -94743917 + URR1B DNA MER1_type 28 225 0 7 1133 194 0 39 0 chrX 71907725 71907751 -94742545 + (TAAAA)n Simple_repeat Simple_repeat 1 27 0 7 1133 630 222 56 197 chrX 71908348 71908724 -94741572 - RMER20B LTR ERVK -215 412 90 7 1133 582 219 8 23 chrX 71908827 71908958 -94741338 - MERVK26-int LTR ERVK -2 6917 6789 7 1133 3195 276 133 69 chrX 71908959 71910759 -94739537 + L1_Mur2 LINE L1 2893 4827 -1053 7 1133 1143 91 106 17 chrX 71910759 71910938 -94739358 + B2_Mm2 SINE B2 1 195 0 7 1133 3195 276 133 69 chrX 71910938 71911006 -94739290 + L1_Mur2 LINE L1 4828 4918 -962 7 1133 276 30 0 0 chrX 71911006 71911039 -94739257 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 7 1133 3195 276 133 69 chrX 71911039 71911050 -94739246 + L1_Mur2 LINE L1 4919 4919 -961 7 1133 924 154 0 0 chrX 71911050 71911186 -94739110 - B1_Mus2 SINE Alu -7 140 5 7 1133 4431 152 45 6 chrX 71911186 71911999 -94738297 + L1_Mur2 LINE L1 4919 5792 -388 7 1133 2634 200 22 15 chrX 71912011 71912545 -94737751 + Lx4A LINE L1 6520 7057 -1 7 1133 22 0 0 0 chrX 71912545 71912567 -94737729 + AT_rich Low_complexity Low_complexity 1 22 0 7 1133 3349 204 55 12 chrX 71913192 71913870 -94736426 - RMER19B LTR ERVK 0 902 196 7 1133 3580 38 33 0 chrX 71913870 71914292 -94736004 - RLTR10C LTR ERVK 0 436 1 7 1133 7544 50 2 51 chrX 71914292 71915271 -94735025 - MMERVK10C-int LTR ERVK 0 7581 6651 7 1133 42090 45 0 1 chrX 71915262 71920205 -94730091 - MMERVK10C-int LTR ERVK -1771 5810 870 7 1133 2762 82 55 3 chrX 71920203 71920582 -94729714 - MMERVK10C-int LTR ERVK -7182 399 1 7 1133 3352 44 4 118 chrX 71920582 71921074 -94729222 - RLTR10C LTR ERVK 0 436 1 7 1133 1090 201 5 15 chrX 71921075 71921277 -94729019 - RMER19B LTR ERVK -702 200 1 7 1133 270 0 0 0 chrX 71924551 71924581 -94725715 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 7 1133 364 138 26 35 chrX 71925428 71925541 -94724755 + (TA)n Simple_repeat Simple_repeat 1 112 0 7 1133 6875 115 12 3 chrX 71926162 71927265 -94723031 - L1_Mus3 LINE L1 -6 6632 5515 7 1133 18578 149 23 20 chrX 71927283 71929596 -94720700 - L1_Mus3 LINE L1 -1270 4613 2285 7 1133 2546 88 0 9 chrX 71929596 71929941 -94720355 + ORR1A1 LTR MaLR 1 342 -4 7 1133 18578 160 26 22 chrX 71929941 71931865 -94718431 - L1_Mus3 LINE L1 -3599 2284 361 7 1133 943 209 77 29 chrX 71932326 71932533 -94717763 + RLTR41 LTR ERV1 230 446 0 7 1133 1433 221 48 9 chrX 71932537 71932867 -94717429 - ORR1B1-int LTR MaLR -852 728 325 7 1133 2996 101 77 2 chrX 71932867 71933362 -94716934 - RLTR47_MM LTR ERV1 0 532 1 7 1133 694 56 0 0 chrX 71933565 71933654 -94716642 + RMER19A LTR ERVK 1 89 -648 7 1133 3473 178 126 69 chrX 71933657 71934508 -94715788 - RMER13B LTR ERVK -9 899 1 7 1133 3421 158 93 2 chrX 71934510 71935099 -94715197 + RMER19A LTR ERVK 95 737 0 7 1133 402 324 11 61 chrX 71935165 71935181 -94715115 + B4A SINE B4 77 135 -157 7 1133 869 138 14 0 chrX 71935181 71935319 -94714977 + B1_Mus1 SINE Alu 9 148 0 7 1133 402 324 11 61 chrX 71935319 71935346 -94714950 + B4A SINE B4 136 248 -44 7 1133 861 144 0 0 chrX 71935358 71935504 -94714792 + (GGA)n Simple_repeat Simple_repeat 3 148 0 7 1133 280 193 22 78 chrX 71936162 71936252 -94714044 - MERVK26-int LTR ERVK -702 2536 2452 7 1133 278 194 14 27 chrX 71936492 71936566 -94713730 - MERVK26-int LTR ERVK -4797 1340 1268 7 1133 802 280 0 0 chrX 71936558 71936765 -94713531 - MYSERV6-int LTR ERVK -5897 3062 2856 7 1133 316 313 60 36 chrX 71938041 71938293 -94712003 - MERVK26-int LTR ERVK -6466 453 196 7 1133 263 222 32 0 chrX 71938321 71938384 -94711912 + ORR1D2 LTR MaLR 1 65 -305 7 1133 283 135 8 59 chrX 71939696 71939814 -94710482 + (TTTG)n Simple_repeat Simple_repeat 1 112 0 7 1133 1052 122 0 11 chrX 71941930 71942104 -94708192 + (TCTCCC)n Simple_repeat Simple_repeat 4 175 0 7 1133 1107 67 9 9 chrX 71942392 71942623 -94707673 + (TTTC)n Simple_repeat Simple_repeat 1 231 0 7 1133 394 298 32 24 chrX 71942655 71942779 -94707517 + B4A SINE B4 3 127 -165 7 1133 261 0 0 0 chrX 71942835 71942864 -94707432 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 7 1133 317 247 174 10 chrX 71942989 71943087 -94707209 + B4A SINE B4 179 292 0 7 1133 1043 93 0 0 chrX 71944063 71944203 -94706093 + B1_Mus2 SINE Alu 1 140 -7 7 1133 229 364 36 9 chrX 71946382 71946493 -94703803 + MIR SINE MIR 16 129 -133 7 1133 748 127 7 50 chrX 71947548 71947689 -94702607 - B1_Mur2 SINE Alu 0 149 15 7 1133 235 227 61 0 chrX 71947714 71947780 -94702516 - B4A SINE B4 -73 219 150 7 1133 453 19 0 0 chrX 71948392 71948446 -94701850 + (CA)n Simple_repeat Simple_repeat 2 55 0 7 1133 227 54 0 26 chrX 71949043 71949081 -94701215 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 7 1133 25 51 0 0 chrX 71950589 71950628 -94699668 + AT_rich Low_complexity Low_complexity 1 39 0 7 1133 210 143 0 0 chrX 71950737 71950786 -94699510 + (TC)n Simple_repeat Simple_repeat 2 50 0 7 1133 195 42 0 0 chrX 71950854 71950878 -94699418 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 1133 204 158 0 0 chrX 71950948 71950986 -94699310 + CT-rich Low_complexity Low_complexity 5 42 0 7 1133 402 327 5 112 chrX 71950986 71951119 -94699177 - B4A SINE B4 -86 206 83 7 1133 577 219 54 83 chrX 71951119 71951323 -94698973 - B3A SINE B2 0 198 1 7 1133 402 327 5 112 chrX 71951323 71951413 -94698883 - B4A SINE B4 -210 82 7 7 1133 416 272 36 24 chrX 71951620 71951786 -94698510 + RLTR18B LTR ERVK 5 172 -340 7 1133 572 291 76 75 chrX 71951962 71952319 -94697977 + RLTR18 LTR ERVK 120 593 -23 7 1133 3472 40 0 0 chrX 71952319 71952715 -94697581 - MTA_Mm LTR MaLR 0 396 1 7 1133 9350 34 5 0 chrX 71952715 71953808 -94696488 - MTA_Mm-int LTR MaLR 0 1098 1 7 1133 3440 43 0 0 chrX 71953808 71954204 -94696092 - MTA_Mm LTR MaLR 0 396 1 7 1133 572 272 76 98 chrX 71954204 71954224 -94696072 + RLTR18 LTR ERVK 594 608 -8 7 1133 489 17 0 0 chrX 71954226 71954284 -94696012 + (CA)n Simple_repeat Simple_repeat 2 59 0 7 1133 324 230 14 0 chrX 71954803 71954877 -94695419 - HAL1-3A_ME LINE L1 -806 2052 1978 7 1133 322 326 83 8 chrX 71954999 71955016 -94695280 - B4A SINE B4 -68 224 198 7 1133 1197 21 0 0 chrX 71955016 71955156 -94695140 + (TCTCCC)n Simple_repeat Simple_repeat 6 145 0 7 1133 322 326 83 8 chrX 71955156 71955271 -94695025 - B4A SINE B4 -95 197 82 7 1133 543 259 59 0 chrX 71955314 71955484 -94694812 - B3A SINE B2 -18 180 1 7 1133 250 304 0 0 chrX 71955495 71955574 -94694722 - B4A SINE B4 -207 85 7 7 1133 195 69 0 0 chrX 71955614 71955643 -94694653 + (TTG)n Simple_repeat Simple_repeat 2 30 0 7 1133 413 266 14 31 chrX 71955777 71955948 -94694348 + RLTR18 LTR ERVK 1 172 -340 7 1133 603 299 77 58 chrX 71956125 71956495 -94693801 + RLTR18 LTR ERVK 120 609 -7 7 1133 297 0 0 0 chrX 71956495 71956528 -94693768 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 1133 571 315 0 48 chrX 71957155 71957365 -94692931 - B3 SINE B2 0 216 17 7 1133 922 281 96 36 chrX 71957382 71957829 -94692467 + Lx8 LINE L1 6998 7471 -2 7 1133 532 273 22 83 chrX 71957849 71958077 -94692219 + B3 SINE B2 1 214 -2 7 1133 502 205 8 71 chrX 71958228 71958354 -94691942 + L1M2 LINE L1 5677 5794 -506 7 1134 575 28 0 0 chrX 71959140 71959212 -94691084 - U6 snRNA snRNA -35 72 1 8 1134 245 232 188 10 chrX 71959224 71959320 -94690976 + L1M2 LINE L1 5802 5914 -386 7 1134 186 71 0 0 chrX 71959373 71959401 -94690895 + (CAGA)n Simple_repeat Simple_repeat 2 29 0 8 1134 303 130 0 0 chrX 71960216 71960270 -94690026 + (CAG)n Simple_repeat Simple_repeat 3 56 0 8 1134 1834 220 31 71 chrX 71960394 71960504 -94689792 - ORR1D-int LTR MaLR -755 615 524 8 1134 2673 161 68 21 chrX 71960504 71961032 -94689264 + RLTR31_Mur LTR ERVK 1 553 0 8 1134 423 0 0 0 chrX 71961033 71961080 -94689216 + (CAA)n Simple_repeat Simple_repeat 2 48 0 8 1134 1834 220 31 71 chrX 71961080 71961486 -94688810 - ORR1D-int LTR MaLR -847 523 118 8 1134 629 47 0 12 chrX 71961689 71961775 -94688521 + (GA)n Simple_repeat Simple_repeat 1 85 0 8 1134 2037 179 20 39 chrX 71962274 71962680 -94687616 - RMER10B LTR ERVL 0 398 1 8 1134 275 338 68 20 chrX 71963537 71963685 -94686611 + L1M1 LINE L1 5476 5630 -670 8 1134 333 219 53 61 chrX 71963863 71963994 -94686302 - RLTR13D3 LTR ERVK -42 1072 943 8 1134 3291 43 5 10 chrX 71964202 71964600 -94685696 - MTA_Mm LTR MaLR 0 396 1 8 1134 233 244 146 0 chrX 71965078 71965160 -94685136 - RLTR13D3 LTR ERVK -1020 94 1 8 1134 561 282 60 23 chrX 71965532 71965797 -94684499 + Lx7 LINE L1 5588 5862 -1834 8 1134 1652 169 16 160 chrX 71966119 71966557 -94683739 - ORR1C1 LTR MaLR -1 377 3 8 1134 250 360 31 81 chrX 71966806 71966966 -94683330 + B4A SINE B4 24 175 -117 8 1134 202 174 0 42 chrX 71967070 71967118 -94683178 + (CATA)n Simple_repeat Simple_repeat 1 46 0 8 1134 585 0 0 0 chrX 71967446 71967511 -94682785 + (GA)n Simple_repeat Simple_repeat 1 65 0 8 1134 421 113 0 0 chrX 71967613 71967675 -94682621 - L1_Mur2 LINE L1 -696 5181 5120 8 1134 213 328 62 15 chrX 71967725 71967855 -94682441 - MIRb SINE MIR -80 188 53 8 1134 7502 185 25 36 chrX 71968192 71968752 -94681544 - Lx7 LINE L1 -134 7562 6761 8 1134 402 21 0 0 chrX 71968752 71968799 -94681497 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1134 7502 179 24 35 chrX 71968799 71970383 -94679913 - Lx7 LINE L1 -925 6771 5218 8 1134 1750 166 4 88 chrX 71970561 71971041 -94679255 + RMER17C LTR ERVK 19 439 -519 8 1134 806 236 72 0 chrX 71971076 71971271 -94679025 - B3 SINE B2 -6 210 2 8 1134 641 265 40 0 chrX 71972744 71972895 -94677401 + ID_B1 SINE B4 67 223 -1 8 1134 456 19 0 0 chrX 71973832 71973885 -94676411 + (CTTTG)n Simple_repeat Simple_repeat 1 53 0 8 1134 598 194 72 8 chrX 71973885 71974010 -94676286 - B1_Mur2 SINE Alu -12 137 5 8 1134 190 0 67 0 chrX 71974022 71974052 -94676244 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 8 1134 225 0 0 0 chrX 71974131 71974156 -94676140 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 8 1134 271 238 0 0 chrX 71974453 71974516 -94675780 + BC1_Mm scRNA scRNA 8 70 -82 8 1134 190 393 18 0 chrX 71976814 71976926 -94673370 + MIR SINE MIR 16 129 -133 8 1134 387 112 61 5 chrX 71977098 71977183 -94673113 - Lx2 LINE L1 -89 6911 6823 8 1134 211 313 17 34 chrX 71978301 71978420 -94671876 + CT-rich Low_complexity Low_complexity 1 117 0 8 1134 443 288 30 8 chrX 71978735 71978868 -94671428 - B1F1 SINE Alu -4 145 10 8 1134 483 96 0 0 chrX 71980270 71980353 -94669943 + (TC)n Simple_repeat Simple_repeat 2 84 0 8 1134 195 42 0 0 chrX 71980419 71980443 -94669853 + (TG)n Simple_repeat Simple_repeat 1 24 0 8 1134 294 143 0 0 chrX 71980531 71980580 -94669716 + (CCCCCT)n Simple_repeat Simple_repeat 6 54 0 8 1134 472 316 5 112 chrX 71980580 71980713 -94669583 - B4A SINE B4 -86 206 83 8 1134 616 218 49 78 chrX 71980713 71980917 -94669379 - B3A SINE B2 0 198 1 8 1134 472 316 5 112 chrX 71980917 71981007 -94669289 - B4A SINE B4 -210 82 7 8 1134 409 252 20 16 chrX 71981257 71981427 -94668869 + RLTR18 LTR ERVK 1 172 -340 8 1134 538 316 62 42 chrX 71981606 71981977 -94668319 + RLTR18 LTR ERVK 120 610 -6 8 1134 762 236 131 21 chrX 71982198 71982480 -94667816 + L1MA4 LINE L1 5476 5788 -512 8 1134 236 190 0 33 chrX 71982481 71982541 -94667755 + (TATG)n Simple_repeat Simple_repeat 1 58 0 8 1134 367 276 13 26 chrX 71982541 71982697 -94667599 + L1MA4 LINE L1 5777 5930 -370 8 1134 2913 49 0 0 chrX 71983001 71983347 -94666949 + ORR1A1 LTR MaLR 1 346 0 8 1134 189 74 0 0 chrX 71983510 71983537 -94666759 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 8 1134 230 236 36 0 chrX 71984223 71984278 -94666018 + RMER15 LTR ERVL 4 60 -515 8 1134 1427 242 134 20 chrX 71984301 71984794 -94665502 + RMER15 LTR ERVL 27 575 0 8 1134 201 225 0 0 chrX 71986016 71986056 -94664240 + C-rich Low_complexity Low_complexity 1 40 0 8 1134 303 28 0 0 chrX 71987890 71987926 -94662370 + (TTTTG)n Simple_repeat Simple_repeat 3 38 0 8 1134 1106 50 0 53 chrX 71988114 71988304 -94661992 + (TTTTC)n Simple_repeat Simple_repeat 1 180 0 8 1134 258 81 0 0 chrX 71988317 71988354 -94661942 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 8 1134 993 155 0 0 chrX 71988539 71988849 -94661447 + CT-rich Low_complexity Low_complexity 1 310 0 8 1134 352 338 0 29 chrX 71989476 71989613 -94660683 - ID_B1 SINE B4 -3 221 89 8 1134 10614 99 17 11 chrX 71991815 71993609 -94656687 - L1VL4 LINE L1 -1056 2503 697 8 1134 10997 132 18 4 chrX 71993615 71996202 -94654094 - L1_Mus4 LINE L1 -12 6624 3998 8 1134 569 39 0 13 chrX 71996202 71996281 -94654015 - RLTR10B2 LTR ERVK 0 365 288 8 1134 9488 50 0 4 chrX 71996281 71997416 -94652880 - MMERVK10C-int LTR ERVK -2149 5432 4303 8 1134 291 125 125 0 chrX 71997417 71997473 -94652823 + L1Md_A LINE L1 7 69 -6655 8 1134 5520 62 0 44 chrX 71997475 71998012 -94652284 + L1Md_A LINE L1 606 1136 -5588 8 1134 726 85 127 0 chrX 71998012 71998130 -94652166 + L1Md_A LINE L1 6450 6582 0 8 1134 5520 27 0 6 chrX 71998130 71998787 -94651509 + L1Md_A LINE L1 1137 1766 -4117 8 1134 10524 23 0 0 chrX 71998785 72000000 -94650296 + L1Md_A LINE L1 3729 4943 -940 8 1134 5676 17 0 2 chrX 72000000 72000644 -94649652 + L1Md_T LINE L1 4944 5586 -297 1 1134 8249 47 1 0 chrX 72000644 72001638 -94648658 + L1Md_T LINE L1 5587 6581 -1 1 1134 6298 57 1 1 chrX 72001638 72002641 -94647655 - MMERVK10C-int LTR ERVK -3269 4312 3512 2 1134 352 67 0 0 chrX 72002644 72002689 -94647607 - MMERVK10C-int LTR ERVK -6405 137 93 2 1134 246 229 8 39 chrX 72002689 72002816 -94647480 + T-rich Low_complexity Low_complexity 2 124 0 3 1134 1465 62 0 0 chrX 72002870 72003048 -94647248 - MMERVK10C-int LTR ERVK -7403 178 1 2 1134 3477 45 38 2 chrX 72003048 72003469 -94646827 - RLTR10C LTR ERVK 0 436 1 2 1134 1895 147 0 12 chrX 72003469 72003799 -94646497 - L1_Mm LINE L1 -1880 4003 3678 4 1134 245 121 0 0 chrX 72004325 72004358 -94645938 + B1_Mus1 SINE Alu 2 34 -114 5 1134 420 78 0 15 chrX 72004367 72004432 -94645864 - L1_Mur2 LINE L1 -2153 3724 3661 6 1134 599 216 145 48 chrX 72004432 72004680 -94645616 - RLTR10A LTR ERVK 0 411 140 7 1134 1466 103 0 26 chrX 72004731 72004961 -94645335 - L1_Mur1 LINE L1 -2211 3675 3452 8 1134 3155 80 0 2 chrX 72004962 72005363 -94644933 + MTB LTR MaLR 1 400 0 9 1134 552 275 50 94 chrX 72005550 72005751 -94644545 - B3A SINE B2 -6 192 1 1 1134 849 194 158 21 chrX 72005935 72006125 -94644171 - B3 SINE B2 0 216 1 1 1134 323 280 10 20 chrX 72006182 72006284 -94644012 + L1M2 LINE L1 5696 5796 -495 1 1134 1058 243 250 23 chrX 72006594 72006902 -94643394 + MTD LTR MaLR 1 378 -43 1 1134 381 43 0 0 chrX 72007251 72007298 -94642998 + (GGA)n Simple_repeat Simple_repeat 2 48 0 1 1134 372 291 101 0 chrX 72008552 72008700 -94641596 + L1M4c LINE L1 1429 1591 -4793 1 1134 180 0 0 0 chrX 72009000 72009020 -94641276 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 1134 1083 199 0 5 chrX 72009020 72009207 -94641089 - B3 SINE B2 -30 186 1 1 1134 366 339 97 17 chrX 72009428 72009728 -94640568 + L1M4c LINE L1 2030 2353 -4031 1 1134 1395 276 54 39 chrX 72009728 72010135 -94640161 - MTD LTR MaLR -6 413 1 1 1134 551 14 0 0 chrX 72010743 72010812 -94639484 + L1_Mus2 LINE L1 6498 6566 0 1 1134 374 186 0 0 chrX 72010832 72010891 -94639405 + B3A SINE B2 4 62 -136 2 1134 1157 248 239 28 chrX 72010912 72011380 -94638916 - RMER15 LTR ERVL 0 575 9 2 1134 1713 295 17 27 chrX 72011420 72011984 -94638312 + Lx5 LINE L1 6449 7330 -130 2 1134 215 315 0 0 chrX 72012000 72012054 -94638242 - PB1D10 SINE Alu -43 74 21 2 1134 618 213 41 34 chrX 72012182 72012354 -94637942 - Lx6 LINE L1 -52 7408 7255 2 1134 257 326 43 36 chrX 72014767 72014785 -94635511 + B1F SINE Alu 6 144 -3 2 1134 414 333 0 0 chrX 72014785 72014905 -94635391 + ID_B1 SINE B4 102 221 -3 2 1134 387 237 0 0 chrX 72015507 72015642 -94634654 + GA-rich Low_complexity Low_complexity 3 137 0 2 1134 1153 75 11 0 chrX 72015643 72015817 -94634479 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 2 1134 206 208 0 117 chrX 72015823 72015883 -94634413 + L2 LINE L2 2307 2359 -1060 2 1134 723 81 0 0 chrX 72016006 72016105 -94634191 + (GAAAA)n Simple_repeat Simple_repeat 2 100 0 3 1134 374 154 13 0 chrX 72017364 72017442 -94632854 + (CA)n Simple_repeat Simple_repeat 1 79 0 3 1134 330 318 43 62 chrX 72018532 72018693 -94631603 + L1M4 LINE L1 4136 4293 -1853 3 1134 354 127 0 0 chrX 72018767 72018838 -94631458 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 1134 2084 255 139 21 chrX 72019215 72019350 -94630946 + Lx6 LINE L1 6760 6912 -548 3 1134 895 79 35 52 chrX 72019350 72019523 -94630773 + L1_Mus3 LINE L1 6469 6638 0 3 1134 2084 255 139 21 chrX 72019523 72019964 -94630332 + Lx6 LINE L1 6913 7403 -57 3 1134 22 35 0 0 chrX 72020130 72020159 -94630137 + AT_rich Low_complexity Low_complexity 1 29 0 3 1134 602 261 127 26 chrX 72020187 72020376 -94629920 - B3 SINE B2 -3 213 6 3 1134 276 100 0 0 chrX 72020423 72020463 -94629833 + (CAA)n Simple_repeat Simple_repeat 3 42 0 3 1134 192 40 0 0 chrX 72022869 72022894 -94627402 + (GGATG)n Simple_repeat Simple_repeat 2 26 0 3 1134 189 263 70 139 chrX 72023007 72023122 -94627174 + L3 LINE CR1 860 966 -3523 4 1134 195 69 0 0 chrX 72023651 72023680 -94626616 + (TGGGGG)n Simple_repeat Simple_repeat 1 29 0 4 1134 706 198 0 7 chrX 72024213 72024361 -94625935 - B1_Mur3 SINE Alu -1 149 9 4 1134 467 140 279 66 chrX 72024374 72024496 -94625800 + B1_Mus1 SINE Alu 1 148 0 4 1134 207 0 0 0 chrX 72024496 72024519 -94625777 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1134 1524 180 60 52 chrX 72024902 72025061 -94625235 - ORR1D1 LTR MaLR -2 372 211 4 1134 1154 95 0 0 chrX 72025061 72025208 -94625088 - B1_Mus1 SINE Alu 0 148 2 4 1134 1524 180 60 52 chrX 72025208 72025417 -94624879 - ORR1D1 LTR MaLR -164 210 1 4 1134 857 184 55 11 chrX 72025417 72025598 -94624698 - ORR1D1-int LTR MaLR 0 1370 1182 4 1134 354 222 90 19 chrX 72025598 72025754 -94624542 + RLTR15 LTR ERVK 1 167 -192 4 1134 399 41 0 0 chrX 72025754 72025803 -94624493 + (GGGA)n Simple_repeat Simple_repeat 1 49 0 4 1134 248 303 50 35 chrX 72025803 72026005 -94624291 + RLTR15 LTR ERVK 72 276 -83 4 1134 892 169 0 36 chrX 72026004 72026065 -94624231 - ORR1D1-int LTR MaLR -196 1174 1119 4 1134 1946 117 94 0 chrX 72026065 72026363 -94623933 - ORR1A3 LTR MaLR 0 326 1 5 1134 892 169 0 36 chrX 72026363 72026467 -94623829 - ORR1D1-int LTR MaLR -252 1118 1015 4 1134 634 115 62 0 chrX 72026467 72026563 -94623733 + RLTR40 LTR ERVK 1 102 -715 5 1134 22 56 0 0 chrX 72026621 72026657 -94623639 + AT_rich Low_complexity Low_complexity 1 36 0 5 1134 5514 116 64 51 chrX 72026880 72027858 -94622438 + MTC-int LTR MaLR 141 1131 -127 5 1134 285 145 111 16 chrX 72027858 72027921 -94622375 - RMER19B LTR ERVK 0 902 834 5 1134 1648 235 40 106 chrX 72027912 72028488 -94621808 - RLTR18 LTR ERVK -78 538 1 5 1134 336 83 0 0 chrX 72029656 72029704 -94620592 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1134 321 281 53 90 chrX 72030084 72030272 -94620024 + RMER15 LTR ERVL 286 466 -109 5 1134 1902 91 47 7 chrX 72030410 72030687 -94619609 + L1Md_F2 LINE L1 6293 6580 -2 5 1134 434 326 80 0 chrX 72031518 72031538 -94618758 + B1F SINE Alu 1 149 0 5 1134 596 246 34 0 chrX 72031538 72031656 -94618640 + ID_B1 SINE B4 103 224 0 6 1134 1157 39 0 37 chrX 72031881 72032068 -94618228 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 1134 1011 305 8 0 chrX 72032371 72032627 -94617669 + B4 SINE B4 19 276 -16 6 1134 266 195 13 0 chrX 72032685 72032762 -94617534 + (CA)n Simple_repeat Simple_repeat 1 78 0 6 1134 222 116 0 0 chrX 72033373 72033416 -94616880 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1134 325 260 100 27 chrX 72033571 72033721 -94616575 + L1_Rod LINE L1 2454 2614 -3233 6 1134 486 0 0 0 chrX 72033996 72034050 -94616246 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 1134 375 23 0 0 chrX 72034050 72034093 -94616203 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1134 767 296 38 52 chrX 72034119 72034408 -94615888 + B4A SINE B4 8 292 0 6 1134 332 262 0 0 chrX 72034421 72034524 -94615772 + (CAGA)n Simple_repeat Simple_repeat 4 106 0 6 1134 204 67 0 0 chrX 72034527 72034557 -94615739 + (GA)n Simple_repeat Simple_repeat 1 30 0 7 1134 276 244 96 30 chrX 72036951 72037086 -94613210 - SUBTEL_sa Satellite Satellite -22 152 9 7 1134 2654 37 178 0 chrX 72038320 72038669 -94611627 + IAPLTR2a LTR ERVK 1 411 0 7 1134 691 179 0 16 chrX 72038953 72039078 -94611218 - RMER19A LTR ERVK -520 217 95 7 1134 3595 175 123 69 chrX 72039080 72039933 -94610363 + RMER13B LTR ERVK 1 899 -9 7 1134 694 56 0 0 chrX 72039936 72040025 -94610271 - RMER19A LTR ERVK -648 89 1 7 1134 2979 101 77 2 chrX 72040225 72040720 -94609576 + RLTR47_MM LTR ERV1 1 532 0 7 1134 1421 223 48 9 chrX 72040720 72041050 -94609246 + ORR1B1-int LTR MaLR 325 728 -852 7 1134 958 211 76 29 chrX 72041054 72041264 -94609032 - RLTR41 LTR ERV1 0 446 227 7 1134 18567 163 27 19 chrX 72041726 72043628 -94606668 + L1_Mus3 LINE L1 364 2284 -3599 7 1134 2585 85 0 9 chrX 72043628 72043973 -94606323 - ORR1A1 LTR MaLR -4 342 1 8 1134 18567 151 24 15 chrX 72043973 72046282 -94604014 + L1_Mus3 LINE L1 2285 4613 -1270 7 1134 6792 120 12 2 chrX 72046300 72047402 -94602894 + L1_Mus3 LINE L1 5515 6632 -6 7 1134 322 164 26 35 chrX 72048024 72048138 -94602158 + (TA)n Simple_repeat Simple_repeat 1 113 0 8 1134 270 0 0 0 chrX 72048985 72049015 -94601281 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 8 1134 1090 201 5 15 chrX 72052228 72052430 -94597866 + RMER19B LTR ERVK 1 200 -702 8 1134 3352 44 4 118 chrX 72052431 72052923 -94597373 + RLTR10C LTR ERVK 1 436 0 8 1134 2762 82 55 3 chrX 72052923 72053302 -94596994 + MMERVK10C-int LTR ERVK 1 399 -7182 8 1134 34179 47 0 1 chrX 72053300 72058243 -94592053 + MMERVK10C-int LTR ERVK 870 5810 -1771 8 1134 7174 48 2 51 chrX 72058234 72059213 -94591083 + MMERVK10C-int LTR ERVK 6651 7581 0 8 1134 3511 36 48 0 chrX 72059213 72059629 -94590667 + RLTR10C LTR ERVK 1 436 0 8 1134 3355 201 55 12 chrX 72059629 72060307 -94589989 + RMER19B LTR ERVK 196 902 0 8 1134 22 0 0 0 chrX 72060932 72060954 -94589342 + AT_rich Low_complexity Low_complexity 1 22 0 8 1134 2692 197 32 16 chrX 72060954 72061510 -94588786 - Lx4A LINE L1 -1 7057 6493 8 1134 4182 148 49 8 chrX 72061510 72062313 -94587983 - Lx4A LINE L1 -1190 5868 4919 8 1134 941 154 0 0 chrX 72062313 72062449 -94587847 + B1_Mus2 SINE Alu 5 140 -7 8 1134 2767 278 132 69 chrX 72062449 72062460 -94587836 - L1_Mur3 LINE L1 -962 4918 4918 8 1134 276 30 0 0 chrX 72062460 72062493 -94587803 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 8 1134 2767 278 132 69 chrX 72062493 72062561 -94587735 - Lx4A LINE L1 -962 4918 4828 8 1134 1141 91 106 17 chrX 72062561 72062740 -94587556 - B2_Mm2 SINE B2 0 195 1 9 1134 3011 215 97 34 chrX 72062740 72064540 -94585756 - Lx4A LINE L1 -1053 4827 2893 8 1134 544 219 8 23 chrX 72064541 72064672 -94585624 + MERVK26-int LTR ERVK 6789 6917 -2 9 1134 646 222 56 197 chrX 72064775 72065151 -94585145 + RMER20B LTR ERVK 90 412 -215 9 1134 194 0 39 0 chrX 72065748 72065774 -94584522 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 9 1134 860 156 96 43 chrX 72067120 72067308 -94582988 - URR1B DNA MER1_type 0 225 28 9 1134 546 263 32 69 chrX 72067656 72067844 -94582452 + B3A SINE B2 32 212 -4 9 1134 231 265 23 46 chrX 72068712 72068799 -94581497 - MER34 LTR ERV1 -380 162 78 9 1134 246 384 56 6 chrX 72070814 72070992 -94579304 - MIR SINE MIR -68 194 8 9 1134 629 235 25 0 chrX 72072679 72072798 -94577498 - ID_B1 SINE B4 0 224 103 9 1134 1934 117 0 7 chrX 72073647 72073932 -94576364 - L1Md_F2 LINE L1 -7 6575 6293 9 1134 323 251 74 116 chrX 72074081 72074270 -94576026 - RMER15 LTR ERVL -109 466 286 1 1134 834 212 90 24 chrX 72076170 72076382 -94573914 + RLTR18B LTR ERVK 1 226 -286 1 1134 1151 231 57 49 chrX 72076546 72076896 -94573400 + RMER13A LTR ERVK 103 455 -405 1 1134 231 213 0 21 chrX 72077810 72077858 -94572438 + CT-rich Low_complexity Low_complexity 4 50 0 1 1134 3357 113 14 10 chrX 72078815 72079307 -94570989 - RLTR19A LTR ERVK 0 496 3 1 1134 493 120 42 17 chrX 72081627 72081746 -94568550 + CT-rich Low_complexity Low_complexity 2 123 0 1 1134 848 128 24 6 chrX 72081759 72081924 -94568372 + CT-rich Low_complexity Low_complexity 1 168 0 1 1134 182 196 0 38 chrX 72081936 72081989 -94568307 + CT-rich Low_complexity Low_complexity 5 55 0 1 1134 390 42 0 0 chrX 72081989 72082037 -94568259 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1134 404 287 14 56 chrX 72082053 72082197 -94568099 + ORR1D2 LTR MaLR 2 139 -231 1 1134 401 0 20 0 chrX 72084932 72084981 -94565315 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1134 912 67 0 0 chrX 72084981 72085101 -94565195 + (GA)n Simple_repeat Simple_repeat 1 120 0 1 1134 356 274 19 6 chrX 72089169 72089224 -94561072 + (TCTG)n Simple_repeat Simple_repeat 3 58 0 1 1134 225 0 0 0 chrX 72089224 72089249 -94561047 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1134 356 274 19 6 chrX 72089249 72089351 -94560945 + (TCTG)n Simple_repeat Simple_repeat 4 106 0 1 141 856 296 28 38 chrX 72089367 72089655 -94560641 - B4A SINE B4 0 292 8 1 1135 567 108 0 0 chrX 72089679 72089772 -94560524 + (GA)n Simple_repeat Simple_repeat 2 94 0 1 1135 300 260 100 27 chrX 72090047 72090197 -94560099 - L1_Rod LINE L1 -3233 2614 2454 1 1135 255 93 0 0 chrX 72090352 72090395 -94559901 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1135 290 185 12 0 chrX 72091006 72091087 -94559209 + (TG)n Simple_repeat Simple_repeat 1 82 0 1 1135 994 304 8 0 chrX 72091145 72091395 -94558901 - B4 SINE B4 -16 276 25 1 1135 1174 28 0 43 chrX 72091698 72091885 -94558411 + (TC)n Simple_repeat Simple_repeat 2 180 0 1 1135 548 263 34 0 chrX 72092122 72092240 -94558056 - ID_B1 SINE B4 0 224 103 1 1135 1861 102 36 7 chrX 72093089 72093364 -94556932 - L1Md_F2 LINE L1 -7 6575 6293 1 1135 303 305 37 79 chrX 72093502 72093691 -94556605 - RMER15 LTR ERVL -109 466 286 1 1135 339 96 0 0 chrX 72094073 72094125 -94556171 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1135 214 158 0 0 chrX 72094274 72094312 -94555984 + C-rich Low_complexity Low_complexity 6 43 0 1 1135 649 253 47 31 chrX 72095299 72095491 -94554805 + RLTR18 LTR ERVK 1 195 -317 1 1135 1208 213 68 65 chrX 72095508 72095875 -94554421 + RLTR18 LTR ERVK 171 538 -78 1 1135 280 145 111 16 chrX 72095866 72095929 -94554367 + RMER19B LTR ERVK 834 902 0 1 1135 5579 114 64 51 chrX 72095929 72096907 -94553389 - MTC-int LTR MaLR -127 1131 141 1 1135 617 156 55 47 chrX 72097192 72097320 -94552976 - RLTR40 LTR ERVK -688 129 1 1 1135 890 167 6 36 chrX 72097320 72097424 -94552872 + ORR1D1-int LTR MaLR 1015 1118 -252 1 1135 2012 111 94 0 chrX 72097424 72097722 -94552574 + ORR1A3 LTR MaLR 1 326 0 1 1135 890 167 6 36 chrX 72097722 72097785 -94552511 + ORR1D1-int LTR MaLR 1119 1177 -193 1 1135 276 288 76 30 chrX 72097781 72097978 -94552318 - RLTR15 LTR ERVK -82 277 72 1 1135 527 15 30 0 chrX 72097980 72098047 -94552249 + (TCCC)n Simple_repeat Simple_repeat 1 69 0 1 1135 423 220 52 15 chrX 72098047 72098181 -94552115 - RLTR15 LTR ERVK -220 139 1 1 1135 836 190 55 11 chrX 72098181 72098362 -94551934 + ORR1D1-int LTR MaLR 1182 1370 0 1 1135 1547 180 60 52 chrX 72098362 72098571 -94551725 + ORR1D1 LTR MaLR 1 210 -164 1 1135 1161 96 0 0 chrX 72098571 72098717 -94551579 + B1_Mus1 SINE Alu 2 147 -1 1 1135 1547 180 60 52 chrX 72098717 72098876 -94551420 + ORR1D1 LTR MaLR 211 372 -2 1 1135 467 140 279 66 chrX 72099270 72099392 -94550904 - B1_Mus1 SINE Alu 0 148 1 1 1135 709 208 0 1 chrX 72099406 72099551 -94550745 + B1_Mur3 SINE Alu 5 148 -1 1 1135 210 37 0 0 chrX 72100086 72100113 -94550183 + (CCA)n Simple_repeat Simple_repeat 1 27 0 1 1135 192 40 0 0 chrX 72100870 72100895 -94549401 + (CATCC)n Simple_repeat Simple_repeat 2 26 0 1 1135 2860 43 0 0 chrX 72101090 72101416 -94548880 + IAPLTR3 LTR ERVK 1 326 0 1 1135 11616 51 8 1 chrX 72101416 72102877 -94547419 + IAPLTR3-int LTR ERVK 1 1472 -5349 1 1135 12676 27 0 3 chrX 72102875 72104377 -94545919 + IAPLTR3-int LTR ERVK 5304 6801 -20 1 1135 2711 58 0 0 chrX 72104377 72104703 -94545593 + IAPLTR3 LTR ERVK 1 326 0 1 1135 330 87 0 0 chrX 72106915 72106961 -94543335 + (TTG)n Simple_repeat Simple_repeat 3 48 0 1 1135 528 254 130 57 chrX 72107004 72107196 -94543100 + B3 SINE B2 2 207 -9 1 1135 22 35 0 0 chrX 72107226 72107255 -94543041 + AT_rich Low_complexity Low_complexity 1 29 0 1 1135 1693 271 14 25 chrX 72107392 72107862 -94542434 - Lx6 LINE L1 -56 7404 6589 1 1135 853 98 35 52 chrX 72107862 72108035 -94542261 - L1_Mus3 LINE L1 0 6638 6469 1 1135 1615 315 13 20 chrX 72108035 72108163 -94542133 - Lx6 LINE L1 -462 6588 6457 1 1135 455 45 15 0 chrX 72108547 72108613 -94541683 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1135 307 290 76 76 chrX 72108677 72108834 -94541462 - L1M5 LINE L1 -1843 4303 4147 1 1135 345 292 50 66 chrX 72108846 72109044 -94541252 - RLTR46 LTR ERVK 0 320 126 1 1135 3621 145 15 3 chrX 72109172 72109782 -94540514 - IAPEY3-int LTR ERVK 0 7680 7064 1 1135 37095 72 1 25 chrX 72109782 72116107 -94534189 + L1Md_T LINE L1 99 5586 -297 1 1135 8138 58 0 0 chrX 72116107 72117134 -94533162 + L1Md_T LINE L1 5587 6582 0 1 1135 29 28 0 0 chrX 72117138 72117174 -94533122 + AT_rich Low_complexity Low_complexity 1 36 0 1 1135 22 35 0 0 chrX 72117280 72117309 -94532987 + AT_rich Low_complexity Low_complexity 1 29 0 1 1135 276 77 0 0 chrX 72118005 72118044 -94532252 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1135 270 0 0 0 chrX 72118255 72118285 -94532011 + (A)n Simple_repeat Simple_repeat 1 30 0 1 1135 36023 185 16 5 chrX 72118285 72125018 -94525278 - IAPEY3-int LTR ERVK -602 7078 246 1 1135 278 188 59 59 chrX 72125003 72125071 -94525225 - IAPLTR3-int LTR ERVK -6375 446 379 1 1135 273 292 50 66 chrX 72125343 72125541 -94524755 - RLTR46 LTR ERVK 0 320 126 1 1135 215 226 16 0 chrX 72126240 72126302 -94523994 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 1135 588 14 0 0 chrX 72126776 72126845 -94523451 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 1135 423 52 0 0 chrX 72127710 72127768 -94522528 + (CTTTG)n Simple_repeat Simple_repeat 2 59 0 1 1135 342 0 0 0 chrX 72127948 72127986 -94522310 + (TTCC)n Simple_repeat Simple_repeat 1 38 0 1 1135 926 157 6 0 chrX 72127986 72128164 -94522132 + CT-rich Low_complexity Low_complexity 2 180 0 1 1135 499 169 16 0 chrX 72128192 72128316 -94521980 + CT-rich Low_complexity Low_complexity 4 129 0 1 1135 362 333 0 0 chrX 72128965 72129085 -94521211 - ID_B1 SINE B4 -3 221 102 1 1135 21453 48 2 0 chrX 72129197 72131837 -94518459 + L1Md_F3 LINE L1 2942 5586 -297 1 1135 7832 57 8 3 chrX 72131837 72132830 -94517466 + L1Md_F3 LINE L1 5587 6584 0 1 1135 3955 194 42 19 chrX 72132851 72133691 -94516605 - RMER19B LTR ERVK -43 859 1 1 1135 234 0 0 0 chrX 72136887 72136913 -94513383 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 1 1135 239 106 45 15 chrX 72137760 72137827 -94512469 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 1135 6814 122 12 1 chrX 72138449 72139550 -94510746 - L1_Mus3 LINE L1 -6 6632 5515 1 1135 18950 147 21 20 chrX 72139568 72141880 -94508416 - L1_Mus3 LINE L1 -1270 4613 2285 1 1135 2692 73 0 3 chrX 72141880 72142223 -94508073 + ORR1A1 LTR MaLR 1 342 -4 1 1135 18950 159 25 18 chrX 72142223 72144143 -94506153 - L1_Mus3 LINE L1 -3599 2284 361 1 1135 854 244 58 10 chrX 72144603 72144810 -94505486 + RLTR41 LTR ERV1 230 446 0 1 1135 1311 201 39 4 chrX 72144864 72145144 -94505152 - ORR1B1-int LTR MaLR -895 614 325 1 1135 2800 106 101 2 chrX 72145144 72145628 -94504668 - RLTR47_MM LTR ERV1 0 532 1 1 1135 599 92 6 0 chrX 72145832 72145926 -94504370 + RMER19A LTR ERVK 1 128 -774 1 1135 3229 181 123 69 chrX 72145927 72146777 -94503519 - RMER13B LTR ERVK -12 896 1 1 1135 3105 155 93 2 chrX 72146779 72147368 -94502928 + RMER19A LTR ERVK 95 737 0 1 1135 857 137 0 0 chrX 72147450 72147589 -94502707 + B1_Mus1 SINE Alu 9 147 -1 1 1135 354 80 0 0 chrX 72147590 72147640 -94502656 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 1 1135 405 98 0 0 chrX 72147643 72147692 -94502604 + (GGA)n Simple_repeat Simple_repeat 3 51 0 1 1135 1326 78 0 0 chrX 72147692 72147872 -94502424 + (GAA)n Simple_repeat Simple_repeat 1 180 0 1 1135 405 98 0 0 chrX 72147872 72147883 -94502413 + (GGA)n Simple_repeat Simple_repeat 1 11 0 1 1135 3863 42 2 0 chrX 72148002 72148455 -94501841 - L1Md_F2 LINE L1 -186 5697 5244 1 1135 7172 42 5 0 chrX 72148455 72149314 -94500982 + L1Md_F2 LINE L1 5720 6582 0 1 1135 286 193 22 78 chrX 72149864 72149954 -94500342 - RMER17C-int LTR ERVK -702 2536 2452 1 1135 341 252 54 16 chrX 72151855 72151984 -94498312 - MERVK26-int LTR ERVK -6590 329 196 1 1135 257 161 33 33 chrX 72153340 72153477 -94496819 + (TTTG)n Simple_repeat Simple_repeat 1 137 0 1 1135 2291 119 98 63 chrX 72153512 72153971 -94496325 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1135 3666 58 3 32 chrX 72153972 72154724 -94495572 + IAPEz-int LTR ERVK 9 662 -5819 1 1135 2174 83 0 0 chrX 72154724 72155002 -94495294 + IAPEz-int LTR ERVK 1359 1636 -4845 1 1135 6151 43 4 19 chrX 72155001 72155758 -94494538 + IAPEz-int LTR ERVK 5736 6481 0 1 1135 2281 120 87 52 chrX 72155758 72156217 -94494079 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1135 1025 45 0 15 chrX 72158302 72158438 -94491858 + (TCTCCC)n Simple_repeat Simple_repeat 3 136 0 1 1135 898 117 13 13 chrX 72158731 72158887 -94491409 + (TTTC)n Simple_repeat Simple_repeat 4 159 0 1 1135 313 311 24 16 chrX 72158918 72159042 -94491254 + B4A SINE B4 3 127 -165 1 1135 195 42 0 0 chrX 72159103 72159127 -94491169 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1135 936 138 0 0 chrX 72160315 72160453 -94489843 + B1_Mus2 SINE Alu 1 138 -9 1 1135 246 366 18 0 chrX 72162665 72162777 -94487519 + MIR SINE MIR 16 129 -133 1 1135 784 141 7 47 chrX 72163827 72163976 -94486320 - B1_Mur2 SINE Alu 0 149 7 1 1135 241 135 135 0 chrX 72163994 72164046 -94486250 - B4A SINE B4 -73 219 161 1 1135 288 0 0 0 chrX 72164677 72164709 -94485587 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1135 25 51 0 0 chrX 72166834 72166873 -94483423 + AT_rich Low_complexity Low_complexity 1 39 0 1 1135 210 37 0 0 chrX 72167010 72167037 -94483259 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1135 675 99 0 0 chrX 72167182 72167283 -94483013 + (TCTCCC)n Simple_repeat Simple_repeat 3 103 0 1 1135 371 331 8 0 chrX 72167283 72167407 -94482889 - B4A SINE B4 -86 206 82 1 1135 539 265 59 0 chrX 72167450 72167620 -94482676 - B3A SINE B2 -18 180 1 1 1135 230 316 0 0 chrX 72167631 72167710 -94482586 - B4A SINE B4 -207 85 7 1 1135 419 266 14 31 chrX 72167913 72168084 -94482212 + RLTR18 LTR ERVK 1 172 -340 1 1135 548 308 77 61 chrX 72168261 72168632 -94481664 + RLTR18 LTR ERVK 120 609 -7 1 1135 279 0 0 0 chrX 72168632 72168663 -94481633 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1135 522 325 0 48 chrX 72169292 72169502 -94480794 - B3 SINE B2 0 216 17 2 1135 950 269 103 42 chrX 72169519 72169966 -94480330 + Lx8 LINE L1 6998 7471 -2 2 1135 487 287 22 83 chrX 72169986 72170214 -94480082 + B3 SINE B2 1 214 -2 2 1135 699 240 79 46 chrX 72170365 72170625 -94479671 + L1MA4 LINE L1 5677 5928 -250 2 1135 252 77 0 0 chrX 72170647 72170686 -94479610 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 2 1135 195 42 0 0 chrX 72171494 72171518 -94478778 + (CAG)n Simple_repeat Simple_repeat 3 26 0 2 1135 1823 212 61 83 chrX 72171609 72171772 -94478524 - ORR1D-int LTR MaLR -691 679 524 2 1135 2691 159 68 21 chrX 72171772 72172300 -94477996 + RLTR31_Mur LTR ERVK 1 553 0 2 1135 288 0 0 0 chrX 72172301 72172333 -94477963 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 1135 1823 212 61 83 chrX 72172333 72172742 -94477554 - ORR1D-int LTR MaLR -847 523 118 2 1135 1341 61 0 0 chrX 72172956 72173136 -94477160 + (GA)n Simple_repeat Simple_repeat 1 180 0 2 1135 2037 179 20 39 chrX 72173642 72174048 -94476248 - RMER10B LTR ERVL 0 398 1 2 1135 231 301 81 34 chrX 72174929 72175077 -94475219 + L1M1 LINE L1 5476 5630 -673 2 1135 311 224 81 63 chrX 72175217 72175388 -94474908 - RLTR13D3 LTR ERVK 0 1114 983 2 1135 3358 51 2 0 chrX 72175597 72175992 -94474304 - MTA_Mm LTR MaLR 0 396 1 2 1135 243 132 0 0 chrX 72176518 72176556 -94473740 - RLTR13D3 LTR ERVK -1076 38 1 2 1135 598 283 100 29 chrX 72176906 72177253 -94473043 + Lx7 LINE L1 5525 5928 -1545 2 1135 1735 163 16 159 chrX 72177531 72177970 -94472326 - ORR1C1 LTR MaLR 0 378 3 2 1135 306 279 58 11 chrX 72178220 72178307 -94471989 + B4 SINE B4 24 114 -178 2 1135 36141 35 0 0 chrX 72178342 72183597 -94466699 + L1Md_T LINE L1 238 5589 -297 2 1135 9133 5 0 1 chrX 72183597 72184594 -94465702 + L1Md_T LINE L1 5590 6585 0 2 1135 528 16 0 0 chrX 72185142 72185203 -94465093 + (GA)n Simple_repeat Simple_repeat 1 61 0 2 1135 418 129 0 0 chrX 72185302 72185364 -94464932 - L1_Mur2 LINE L1 -696 5181 5120 2 1135 225 328 62 15 chrX 72185414 72185544 -94464752 - MIRb SINE MIR -80 188 53 2 1135 7359 174 24 36 chrX 72185889 72186449 -94463847 - Lx7 LINE L1 -134 7562 6763 2 1135 207 0 0 0 chrX 72186449 72186472 -94463824 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1135 7359 187 25 36 chrX 72186472 72188057 -94462239 - Lx7 LINE L1 -924 6772 5218 2 1135 1013 207 26 35 chrX 72188235 72188776 -94461520 + RMER17C LTR ERVK 19 428 -530 2 1135 829 226 72 0 chrX 72188811 72189006 -94461290 - B3 SINE B2 -6 210 2 2 1135 669 257 40 0 chrX 72190478 72190630 -94459666 + ID_B1 SINE B4 67 224 0 2 1135 1272 93 38 0 chrX 72191276 72191459 -94458837 - B2_Mm2 SINE B2 -4 191 2 2 1135 252 0 0 0 chrX 72191538 72191566 -94458730 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 1135 321 26 0 0 chrX 72191781 72191819 -94458477 + (CTTTG)n Simple_repeat Simple_repeat 1 38 0 2 1135 598 194 72 8 chrX 72191819 72191944 -94458352 - B1_Mur2 SINE Alu -12 137 5 2 1135 290 222 0 0 chrX 72192371 72192434 -94457862 + BC1_Mm scRNA scRNA 8 70 -82 2 1135 237 378 27 0 chrX 72194728 72194839 -94455457 + MIR SINE MIR 16 129 -133 2 1135 387 112 61 5 chrX 72195011 72195096 -94455200 - Lx2 LINE L1 -89 6911 6823 2 1135 246 313 8 42 chrX 72196214 72196334 -94453962 + CT-rich Low_complexity Low_complexity 2 117 0 2 1135 410 303 30 8 chrX 72196648 72196781 -94453515 - B1F1 SINE Alu -4 145 10 2 1135 25 51 0 0 chrX 72198021 72198060 -94452236 + AT_rich Low_complexity Low_complexity 1 39 0 2 1135 309 82 0 0 chrX 72198177 72198226 -94452070 + (TCTCTG)n Simple_repeat Simple_repeat 6 54 0 2 1135 260 111 0 22 chrX 72198382 72198428 -94451868 + (CCCCCT)n Simple_repeat Simple_repeat 6 50 0 2 1135 392 326 7 34 chrX 72198428 72198561 -94451735 - B4A SINE B4 -86 206 76 2 1135 560 266 52 21 chrX 72198561 72198753 -94451543 - B3A SINE B2 0 198 1 2 1135 392 326 7 34 chrX 72198753 72198765 -94451531 - B4A SINE B4 -217 75 65 2 1135 195 69 0 0 chrX 72198883 72198912 -94451384 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1135 428 266 37 25 chrX 72199054 72199216 -94451080 + RLTR18B LTR ERVK 9 172 -340 2 1135 559 302 81 61 chrX 72199392 72199762 -94450534 + RLTR18 LTR ERVK 120 609 -7 2 1135 279 0 0 0 chrX 72199762 72199793 -94450503 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1135 745 247 116 24 chrX 72199806 72200100 -94450196 + L1MA4 LINE L1 5468 5788 -509 2 1135 200 152 0 42 chrX 72200103 72200151 -94450145 + (TATG)n Simple_repeat Simple_repeat 1 46 0 2 1135 357 283 13 26 chrX 72200151 72200307 -94449989 + L1MA4 LINE L1 5777 5930 -370 2 1135 3004 32 3 0 chrX 72200610 72200955 -94449341 + ORR1A1 LTR MaLR 1 346 0 2 1135 183 100 0 0 chrX 72201115 72201145 -94449151 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2 1135 1427 242 134 20 chrX 72201905 72202398 -94447898 + RMER15 LTR ERVL 27 575 0 2 1135 201 225 0 0 chrX 72203621 72203661 -94446635 + C-rich Low_complexity Low_complexity 1 40 0 2 1135 198 0 0 0 chrX 72205501 72205523 -94444773 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2 1135 1070 130 6 0 chrX 72205704 72205881 -94444415 + (TTCTC)n Simple_repeat Simple_repeat 1 178 0 2 1135 183 80 0 0 chrX 72205881 72205906 -94444390 + (TCCCC)n Simple_repeat Simple_repeat 4 28 0 2 1135 635 90 10 0 chrX 72206130 72206230 -94444066 + (TTCC)n Simple_repeat Simple_repeat 2 102 0 2 1135 23 33 0 0 chrX 72206463 72206493 -94443803 + AT_rich Low_complexity Low_complexity 1 30 0 2 1135 381 333 0 0 chrX 72207062 72207182 -94443114 + ID_B1 SINE B4 102 221 -3 2 1135 659 179 9 0 chrX 72207812 72208030 -94442266 + GA-rich Low_complexity Low_complexity 1 219 0 2 1135 665 24 12 0 chrX 72208220 72208303 -94441993 + (GAAAA)n Simple_repeat Simple_repeat 2 85 0 2 1135 434 125 12 0 chrX 72209561 72209641 -94440655 + (CA)n Simple_repeat Simple_repeat 1 81 0 2 1135 398 75 0 15 chrX 72210947 72211015 -94439281 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1135 1796 310 12 20 chrX 72211399 72211527 -94438769 + Lx5 LINE L1 6455 6582 -468 2 1135 880 79 35 52 chrX 72211527 72211700 -94438596 + L1_Mus3 LINE L1 6469 6638 0 2 1135 1796 310 12 20 chrX 72211700 72212164 -94438132 + Lx5 LINE L1 6583 7041 -9 2 1135 22 35 0 0 chrX 72212307 72212336 -94437960 + AT_rich Low_complexity Low_complexity 1 29 0 2 1135 570 241 135 26 chrX 72212365 72212557 -94437739 - B3 SINE B2 -2 214 2 2 1135 276 100 0 0 chrX 72212600 72212640 -94437656 + (CAA)n Simple_repeat Simple_repeat 3 42 0 2 1135 2184 60 6 249 chrX 72215026 72215540 -94434756 - RLTR10 LTR ERVK 0 390 2 2 1135 192 40 0 0 chrX 72215546 72215571 -94434725 + (GGATG)n Simple_repeat Simple_repeat 2 26 0 2 1135 360 0 0 0 chrX 72216008 72216048 -94434248 + (CAAGA)n Simple_repeat Simple_repeat 2 41 0 2 1135 586 181 23 16 chrX 72216493 72216513 -94433783 + MTB_Mm LTR MaLR 278 300 -107 2 1135 922 103 5 71 chrX 72216513 72216711 -94433585 - Lx LINE L1 0 6654 6470 2 1135 586 181 23 16 chrX 72216711 72216819 -94433477 + MTB_Mm LTR MaLR 301 406 -1 2 1135 464 281 61 0 chrX 72216820 72216934 -94433362 - B3 SINE B2 -25 191 71 2 1135 1146 126 45 0 chrX 72217258 72217456 -94432840 - RLTR22_Mur LTR ERVK -1568 280 74 2 1135 1872 97 6 144 chrX 72217456 72217816 -94432480 - Lx2A LINE L1 0 7008 6699 2 1135 288 0 0 0 chrX 72218177 72218209 -94432087 + (T)n Simple_repeat Simple_repeat 1 32 0 2 1135 2498 95 31 6 chrX 72219151 72219510 -94430786 + RLTR9A LTR ERVK 1 368 0 2 1135 3511 213 11 21 chrX 72219583 72220145 -94430151 - ETnERV2-int LTR ERVK -2665 4741 4182 2 1135 3357 43 5 0 chrX 72220145 72220539 -94429757 + MTA_Mm LTR MaLR 1 396 0 2 141 3511 304 56 60 chrX 72220539 72221762 -94428534 - ETnERV2-int LTR ERVK -3225 4181 2173 2 1136 32313 80 21 6 chrX 72221767 72223414 -94426882 - L1Md_F2 LINE L1 -12 6570 4883 2 1136 243 0 0 0 chrX 72223414 72223441 -94426855 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1136 32313 79 2 9 chrX 72223441 72223459 -94426837 - L1_Mm LINE L1 -1001 4882 4882 2 1136 1145 64 0 0 chrX 72223459 72223600 -94426696 - B1_Mus2 SINE Alu -6 141 1 2 1136 32313 91 15 7 chrX 72223600 72228101 -94422195 - L1Md_F2 LINE L1 -1001 4882 327 2 1136 734 280 82 51 chrX 72228149 72228414 -94421882 - ETnERV2-int LTR ERVK -4043 2124 1861 2 1136 3299 66 28 7 chrX 72228414 72228840 -94421456 + RLTR10C LTR ERVK 2 436 0 2 1136 734 280 82 51 chrX 72228840 72228965 -94421331 - ETnERV2-int LTR ERVK -4307 1860 1722 2 1136 4955 279 13 16 chrX 72229131 72230730 -94419566 - ETnERV-int LTR ERVK -5051 2355 60 2 1136 1859 202 33 33 chrX 72230794 72231214 -94419082 - RLTR9B2 LTR ERVK 0 420 1 2 1136 2462 165 7 7 chrX 72231216 72231668 -94418628 + RLTR22_Mur LTR ERVK 241 692 -1156 2 1136 1466 99 0 0 chrX 72231668 72231889 -94418407 - Lx2B LINE L1 -1124 5876 5656 2 1136 1387 77 16 0 chrX 72232120 72232302 -94417994 - B2_Mm2 SINE B2 -7 188 4 2 1136 1253 134 0 9 chrX 72232659 72232870 -94417426 - Lx2B LINE L1 -224 5662 5454 2 1136 257 65 0 61 chrX 72232884 72232933 -94417363 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 2 1136 3222 112 40 0 chrX 72232942 72233414 -94416882 - Lx3B LINE L1 0 6973 6483 2 1136 1534 138 0 0 chrX 72233414 72233661 -94416635 + Lx3C LINE L1 6510 6756 -220 2 1136 399 200 33 0 chrX 72233691 72233781 -94416515 + Lx3C LINE L1 6882 6974 -2 2 1136 781 163 33 165 chrX 72233789 72234032 -94416264 + RLTR22_Mur LTR ERVK 677 887 -961 2 1136 203 250 66 53 chrX 72234793 72234869 -94415427 - MIR SINE MIR -64 198 122 2 1136 235 308 0 0 chrX 72235706 72235758 -94414538 - B4A SINE B4 -206 86 35 2 1136 29335 77 11 0 chrX 72236022 72237830 -94412466 - L1_Mus1 LINE L1 -1 6566 4738 2 1136 225 0 0 0 chrX 72237830 72237855 -94412441 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 1136 29335 117 24 1 chrX 72237855 72241911 -94408385 - L1_Mus1 LINE L1 -1146 4737 583 2 1136 4691 128 4 45 chrX 72241904 72242705 -94407591 - L1VL4 LINE L1 -5534 768 1 2 1136 1371 75 0 20 chrX 72242711 72242915 -94407381 - MusHAL1 LINE L1 -869 1843 1644 2 1136 659 159 0 0 chrX 72242915 72243022 -94407274 - U6 snRNA snRNA 0 107 1 2 1136 886 222 106 0 chrX 72243043 72243232 -94407064 - B3 SINE B2 0 216 8 2 1136 776 65 0 0 chrX 72243277 72243385 -94406911 - L1_Mus2 LINE L1 -1 6565 6458 2 1136 190 266 62 15 chrX 72243809 72243874 -94406422 - L3b LINE CR1 -243 239 172 3 1136 30 0 0 0 chrX 72244063 72244093 -94406203 + AT_rich Low_complexity Low_complexity 1 30 0 3 1136 731 317 17 21 chrX 72244683 72244973 -94405323 + B4A SINE B4 4 292 0 3 1136 207 0 0 0 chrX 72245113 72245136 -94405160 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1136 228 86 0 0 chrX 72245247 72245282 -94405014 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1136 459 0 0 0 chrX 72245318 72245369 -94404927 + (TTC)n Simple_repeat Simple_repeat 1 51 0 3 1136 547 202 100 18 chrX 72245982 72246131 -94404165 + B1_Mur1 SINE Alu 5 143 -6 3 1136 2172 178 197 2 chrX 72246468 72246914 -94403382 + MT2A LTR ERVL 1 533 0 3 1136 281 344 130 0 chrX 72247630 72247784 -94402512 + L2b LINE L2 3012 3185 -190 3 1136 968 242 26 0 chrX 72248725 72248919 -94401377 + B3 SINE B2 7 205 -11 3 1136 24 0 0 0 chrX 72249097 72249121 -94401175 + AT_rich Low_complexity Low_complexity 1 24 0 3 1136 1418 66 16 0 chrX 72249380 72249562 -94400734 + B2_Mm2 SINE B2 4 188 -7 3 1136 656 192 81 58 chrX 72250141 72250404 -94399892 + MTEb LTR MaLR 62 379 0 3 1136 284 342 166 16 chrX 72251030 72251223 -94399073 - L2 LINE L2 -2009 1410 1189 3 1136 517 248 119 5 chrX 72251276 72251495 -94398801 + L1MC LINE L1 3617 3860 -2286 3 1136 406 143 0 3 chrX 72251767 72251844 -94398452 + L1MC LINE L1 3855 3950 -2196 3 1136 742 254 23 17 chrX 72251855 72252031 -94398265 + B3A SINE B2 5 181 -17 3 1136 243 146 0 0 chrX 72252031 72252086 -94398210 + (TC)n Simple_repeat Simple_repeat 2 56 0 3 1136 246 146 0 0 chrX 72252090 72252131 -94398165 + L1MC LINE L1 3951 3991 -2155 3 1136 3228 39 26 0 chrX 72252134 72252524 -94397772 + L1Md_F3 LINE L1 6171 6570 -14 3 1136 278 241 35 0 chrX 72252642 72252729 -94397567 + GA-rich Low_complexity Low_complexity 3 92 0 3 1136 665 222 30 20 chrX 72252731 72252933 -94397363 + L1MC LINE L1 4002 4205 -1941 3 1136 542 242 109 0 chrX 72252942 72253070 -94397226 + B1F SINE Alu 8 149 0 3 1136 1206 48 0 0 chrX 72253120 72253265 -94397031 + B1_Mus2 SINE Alu 2 146 -1 3 1136 642 202 113 35 chrX 72253278 72253509 -94396787 + L1MC LINE L1 4262 4510 -1636 3 1136 1066 286 38 0 chrX 72253526 72253764 -94396532 + B4A SINE B4 18 264 -28 3 1136 1921 127 4 0 chrX 72253767 72254042 -94396254 - ORR1A2 LTR MaLR -51 276 1 3 1136 255 268 0 0 chrX 72254111 72254167 -94396129 - RSINE1 SINE B4 -1 164 109 3 1136 364 256 182 40 chrX 72254215 72254341 -94395955 - B4 SINE B4 -147 145 2 3 1136 4039 58 4 11 chrX 72254411 72254934 -94395362 - L1_Mus3 LINE L1 0 6638 6120 3 1136 527 261 59 37 chrX 72254991 72255178 -94395118 + B3A SINE B2 5 195 -3 3 1136 1406 94 5 0 chrX 72255188 72255379 -94394917 + B2_Mm1t SINE B2 2 193 0 3 1136 21 0 0 0 chrX 72255379 72255400 -94394896 + AT_rich Low_complexity Low_complexity 1 21 0 3 1136 611 232 81 9 chrX 72255522 72255704 -94394592 + B3 SINE B2 1 194 -1 3 1136 1199 173 27 9 chrX 72255709 72255931 -94394365 + RLTR17 LTR ERVK 203 428 -264 3 1136 2544 58 12 3 chrX 72256945 72257271 -94393025 + L1_Mus1 LINE L1 6239 6567 0 3 1136 608 306 7 0 chrX 72258452 72258596 -94391700 - ID_B1 SINE B4 0 224 80 3 1136 381 219 34 174 chrX 72258980 72259129 -94391167 + L1VL2 LINE L1 184 353 -6069 3 1136 424 195 45 30 chrX 72259209 72259341 -94390955 + L1_Mus2 LINE L1 670 803 -5813 3 1136 2850 130 10 56 chrX 72259349 72260401 -94389895 + L1_Mus2 LINE L1 725 1718 -4165 3 1136 7349 42 7 9 chrX 72260403 72261369 -94388927 + L1Md_F2 LINE L1 4623 5586 -297 3 1136 8099 38 5 6 chrX 72261369 72262363 -94387933 + L1Md_F2 LINE L1 5587 6579 -3 3 1136 27158 100 4 2 chrX 72262369 72267220 -94383076 + L1_Mus2 LINE L1 1704 6565 -1 3 1136 25 0 0 0 chrX 72267225 72267250 -94383046 + AT_rich Low_complexity Low_complexity 1 25 0 3 1136 1144 112 20 0 chrX 72267646 72267842 -94382454 + L1_Mur1 LINE L1 4462 4661 -1225 3 1136 704 146 0 0 chrX 72268138 72268261 -94382035 + L1Md_F LINE L1 46 168 -6351 3 1136 1407 75 0 0 chrX 72268273 72268459 -94381837 + L1Md_F2 LINE L1 5401 5586 -297 3 1136 7961 52 2 6 chrX 72268459 72269459 -94380837 + L1Md_F2 LINE L1 5587 6582 0 3 1136 1458 48 16 26 chrX 72270833 72271026 -94379270 + B2_Mm2 SINE B2 2 192 -3 3 1136 438 20 0 0 chrX 72271752 72271803 -94378493 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1136 210 253 13 39 chrX 72271911 72271989 -94378307 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 3 1136 734 181 13 65 chrX 72272172 72272326 -94377970 + B1_Mus1 SINE Alu 3 148 0 3 1136 513 108 0 13 chrX 72272397 72272472 -94377824 + B2_Mm2 SINE B2 1 74 -121 3 1136 375 23 0 0 chrX 72272473 72272517 -94377779 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 3 1136 239 309 0 0 chrX 72272538 72272606 -94377690 + ID4_ SINE ID 2 69 -14 3 1136 2170 313 50 68 chrX 72272642 72273117 -94377179 + MTE-int LTR MaLR 592 1062 -518 3 1136 321 26 0 0 chrX 72273117 72273155 -94377141 + (TTTTG)n Simple_repeat Simple_repeat 1 38 0 3 1136 915 162 0 0 chrX 72273155 72273291 -94377005 - B1_Mur4 SINE Alu -13 137 2 3 1136 2170 313 50 68 chrX 72273291 72273696 -94376600 + MTE-int LTR MaLR 1063 1456 -124 3 1136 439 240 2 0 chrX 72273703 72273824 -94376472 + ERVL-int LTR ERVL 5627 5751 -10 3 1136 448 324 115 71 chrX 72273825 72274094 -94376202 + MTEa LTR MaLR 4 284 -95 3 1136 198 91 0 0 chrX 72274170 72274203 -94376093 + (T)n Simple_repeat Simple_repeat 1 33 0 3 1136 181 316 30 40 chrX 72274706 72274805 -94375491 + MIR SINE MIR 101 198 -64 3 1136 475 276 9 0 chrX 72274861 72274977 -94375319 + MER44C DNA MER2_type 1 117 -616 3 1136 261 0 0 0 chrX 72274989 72275018 -94375278 + (TC)n Simple_repeat Simple_repeat 2 30 0 3 1136 387 0 0 0 chrX 72275018 72275060 -94375236 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1136 833 280 0 6 chrX 72275067 72275243 -94375053 - B3A SINE B2 -22 176 2 3 1136 1891 280 53 44 chrX 72275246 72275453 -94374843 + MER44C DNA MER2_type 101 319 -414 3 1136 5360 40 5 1 chrX 72275453 72276103 -94374193 + L1Md_F2 LINE L1 5931 6582 0 3 1136 1891 280 53 44 chrX 72276103 72276258 -94374038 + MER44C DNA MER2_type 320 476 -257 3 1136 818 116 34 13 chrX 72276258 72276407 -94373889 + Lx2 LINE L1 6846 6997 0 3 1136 1891 280 53 44 chrX 72276407 72276662 -94373634 + MER44C DNA MER2_type 477 724 -9 3 1136 432 0 0 0 chrX 72276828 72276876 -94373420 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1136 1742 201 19 39 chrX 72277425 72277834 -94372462 + MT2A LTR ERVL 1 540 -61 3 1136 932 7 51 0 chrX 72277834 72277971 -94372325 + (TC)n Simple_repeat Simple_repeat 1 144 0 3 1136 690 273 35 128 chrX 72277971 72277982 -94372314 + MT2A LTR ERVL 541 550 -51 3 1136 241 284 15 0 chrX 72278108 72278175 -94372121 + GA-rich Low_complexity Low_complexity 2 69 0 3 1136 279 309 0 0 chrX 72278927 72278995 -94371301 - ID_B1 SINE B4 -17 207 140 3 1136 861 248 14 19 chrX 72279006 72279216 -94371080 + B3 SINE B2 1 209 -7 3 1136 2571 141 24 7 chrX 72279234 72279647 -94370649 + MTC LTR MaLR 1 420 -1 3 1136 5081 47 17 29 chrX 72279647 72280306 -94369990 + L1_Mus2 LINE L1 5915 6565 -1 3 1136 621 206 72 83 chrX 72280778 72280958 -94369338 - B2_Mm2 SINE B2 -14 181 4 3 1136 402 169 48 0 chrX 72281198 72281281 -94369015 - L2 LINE L2 -1605 1814 1728 3 1136 464 231 92 8 chrX 72281307 72281438 -94368858 + B1F2 SINE Alu 2 143 -6 3 1136 419 327 68 75 chrX 72281805 72282083 -94368213 - L2c LINE L2 0 3387 3112 3 1136 243 0 0 0 chrX 72282463 72282490 -94367806 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1136 812 158 23 0 chrX 72282495 72282628 -94367668 - B1_Mur4 SINE Alu -5 145 10 3 1136 1348 79 16 10 chrX 72282652 72282844 -94367452 + B2_Mm2 SINE B2 1 193 -2 3 1136 305 80 0 20 chrX 72282912 72282963 -94367333 - L1Md_F LINE L1 -4333 1550 1501 3 1136 5731 57 16 7 chrX 72282968 72283698 -94366598 + L1Md_F2 LINE L1 5834 6570 -12 3 1136 639 233 53 41 chrX 72283699 72283869 -94366427 + B3A SINE B2 27 198 0 3 1136 32 57 0 0 chrX 72283869 72283922 -94366374 + AT_rich Low_complexity Low_complexity 1 53 0 3 1136 6936 110 29 2 chrX 72283944 72284969 -94365327 + Lx4A LINE L1 6005 7057 -1 3 1136 748 219 16 0 chrX 72285007 72285135 -94365161 + B1_Mur1 SINE Alu 10 139 -10 3 1136 409 307 37 85 chrX 72285135 72285171 -94365125 + B4A SINE B4 95 250 -42 3 1136 769 275 134 74 chrX 72285176 72285419 -94364877 + L1MA7 LINE L1 5353 5587 -704 3 1136 3607 62 28 4 chrX 72285419 72285889 -94364407 + L1_Mus1 LINE L1 6087 6567 0 3 1136 769 275 134 74 chrX 72285889 72286157 -94364139 + L1MA7 LINE L1 5588 5901 -390 3 1136 189 0 0 0 chrX 72286157 72286178 -94364118 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 3 1136 769 275 134 74 chrX 72286178 72286380 -94363916 + L1MA7 LINE L1 5902 6109 -182 3 1136 7678 115 35 52 chrX 72286410 72287771 -94362525 + Lx2 LINE L1 5646 6983 -14 3 1136 22 0 0 0 chrX 72287855 72287877 -94362419 + AT_rich Low_complexity Low_complexity 1 22 0 3 1136 431 256 0 0 chrX 72287966 72288052 -94362244 - B1F SINE Alu -6 143 58 3 1136 267 266 137 11 chrX 72288206 72288301 -94361995 + MLT1B LTR MaLR 66 172 -218 3 1136 772 191 0 14 chrX 72288308 72288446 -94361850 + B1_Mur4 SINE Alu 3 138 -12 3 1136 249 33 0 0 chrX 72288446 72288476 -94361820 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 3 1136 1775 77 0 0 chrX 72288850 72289084 -94361212 - L1_Mus1 LINE L1 0 6567 6334 3 1136 574 215 33 7 chrX 72289094 72289244 -94361052 - L1Md_F LINE L1 -6012 604 451 3 1136 281 341 24 0 chrX 72289434 72289516 -94360780 + L2b LINE L2 3291 3374 -1 3 1136 249 320 40 0 chrX 72290870 72290970 -94359326 + L1MD2 LINE L1 6013 6116 -243 3 1136 31 0 0 0 chrX 72291217 72291248 -94359048 + AT_rich Low_complexity Low_complexity 1 31 0 3 1136 265 226 0 0 chrX 72291642 72291695 -94358601 + B4A SINE B4 240 292 0 3 1136 218 156 22 0 chrX 72291713 72291758 -94358538 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1136 297 184 81 10 chrX 72291791 72291890 -94358406 + L1_Mus3 LINE L1 6533 6638 0 3 1136 180 322 152 0 chrX 72293162 72293221 -94357075 + L3 LINE CR1 3639 3706 -783 3 1136 1099 223 33 46 chrX 72293439 72293679 -94356617 - B4A SINE B4 -2 290 54 3 1136 189 0 0 0 chrX 72293765 72293786 -94356510 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 1136 230 304 70 63 chrX 72293949 72294107 -94356189 - MIR SINE MIR -30 232 74 4 1136 23 0 0 0 chrX 72294230 72294253 -94356043 + AT_rich Low_complexity Low_complexity 1 23 0 4 1136 4618 77 2 19 chrX 72295443 72296078 -94354218 - L1Md_F2 LINE L1 0 6582 5959 4 1136 9972 64 3 2 chrX 72296078 72297432 -94352864 - L1_Mm LINE L1 -127 5756 4402 4 1136 657 283 9 51 chrX 72297431 72297647 -94352649 - Lx9 LINE L1 -468 7176 6970 4 1136 1733 256 79 12 chrX 72297676 72298185 -94352111 + Lx8 LINE L1 6375 6917 -556 4 1136 5120 67 6 0 chrX 72298190 72298852 -94351444 + L1_Mus1 LINE L1 5896 6561 -6 4 1136 342 269 167 60 chrX 72298941 72299174 -94351122 + Lx8 LINE L1 7212 7469 -4 4 1136 994 93 0 125 chrX 72299507 72299691 -94350605 + B2_Mm2 SINE B2 1 161 -34 4 1136 297 0 0 0 chrX 72299691 72299724 -94350572 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 4 1136 4583 82 1 5 chrX 72299818 72300718 -94349578 + Lx3B LINE L1 5373 6268 -705 4 1136 3526 114 13 6 chrX 72300724 72301255 -94349041 + Lx3B LINE L1 6439 6973 0 4 1136 1566 32 5 0 chrX 72301266 72301451 -94348845 + B2_Mm1a SINE B2 1 186 -7 4 1136 1490 38 0 51 chrX 72302282 72302478 -94347818 + B2_Mm1t SINE B2 1 186 -7 4 1136 2012 268 39 7 chrX 72302552 72303382 -94346914 + Lx6 LINE L1 6455 7460 0 4 1136 886 187 0 0 chrX 72303393 72303543 -94346753 + B1_Mur4 SINE Alu 1 150 0 4 1136 187 79 0 50 chrX 72303824 72303864 -94346432 + (TTTTTG)n Simple_repeat Simple_repeat 5 42 0 4 1136 192 152 0 0 chrX 72303863 72303896 -94346400 + (TGG)n Simple_repeat Simple_repeat 1 33 0 4 1136 849 195 0 7 chrX 72303906 72304056 -94346240 - B1_Mur4 SINE Alu -1 149 1 4 1136 360 0 0 0 chrX 72304283 72304323 -94345973 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1136 1009 61 80 20 chrX 72304692 72304843 -94345453 + L1_Mus1 LINE L1 6408 6567 0 4 1136 180 286 17 35 chrX 72305318 72305376 -94344920 + L3 LINE CR1 3649 3705 -784 4 1136 366 23 0 0 chrX 72305376 72305419 -94344877 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1136 504 278 126 38 chrX 72305466 72305728 -94344568 + L3 LINE CR1 3716 4000 -489 4 1136 1087 30 45 0 chrX 72306069 72306201 -94344095 + B1_Mus2 SINE Alu 1 138 -9 4 1136 185 0 0 39 chrX 72306201 72306227 -94344069 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4 1136 1174 139 119 0 chrX 72306228 72306430 -94343866 + URR1A DNA MER1_type 1 226 0 4 1136 488 320 7 13 chrX 72307109 72307261 -94343035 + MLT1N2 LTR MaLR 357 507 -55 4 1136 333 282 123 11 chrX 72307441 72307620 -94342676 + L1MC LINE L1 3718 3916 -2230 4 1136 451 300 0 41 chrX 72308504 72308650 -94341646 + Lx7 LINE L1 7070 7209 -487 4 1136 496 95 12 0 chrX 72309002 72309086 -94341210 + Lx2A LINE L1 6923 7007 -1 4 1136 1404 89 5 0 chrX 72309375 72309566 -94340730 + B2_Mm1t SINE B2 2 193 0 4 1136 204 40 0 0 chrX 72309566 72309591 -94340705 + (GGAA)n Simple_repeat Simple_repeat 4 28 0 4 1136 1355 88 0 5 chrX 72309710 72309894 -94340402 + B2_Mm2 SINE B2 2 184 -11 4 1136 1002 260 57 32 chrX 72309905 72309986 -94340310 + B4A SINE B4 1 81 -211 4 1136 1184 46 0 0 chrX 72309986 72310137 -94340159 + L1Md_A LINE L1 6432 6582 0 4 1136 1002 260 57 32 chrX 72310137 72310337 -94339959 + B4A SINE B4 82 289 -3 4 1136 186 71 0 0 chrX 72310341 72310369 -94339927 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1136 224 393 21 151 chrX 72310460 72310614 -94339682 - B3 SINE B2 -48 168 37 4 1136 1616 21 0 45 chrX 72310614 72310815 -94339481 - B2_Mm1a SINE B2 0 193 2 4 1136 224 393 21 151 chrX 72310815 72310852 -94339444 - B3 SINE B2 -180 36 2 4 1136 670 248 30 0 chrX 72311247 72311380 -94338916 - B1F SINE Alu -12 137 1 4 1136 281 266 50 86 chrX 72311264 72311404 -94338892 - MT2B2 LTR ERVL -308 276 142 4 1136 1505 58 11 0 chrX 72311433 72311624 -94338672 + B2_Mm1t SINE B2 1 193 0 4 1136 4167 35 2 0 chrX 72311676 72312315 -94337981 - L1Md_F2 LINE L1 -478 6104 5465 4 1136 3743 37 2 7 chrX 72312315 72312773 -94337523 + L1Md_F2 LINE L1 6127 6582 0 4 1136 248 299 0 72 chrX 72313194 72313277 -94337019 + L2 LINE L2 3001 3077 -342 4 1136 2188 83 34 28 chrX 72313668 72313990 -94336306 + ORR1A2 LTR MaLR 3 326 -1 4 1136 10887 134 49 16 chrX 72313991 72315891 -94334405 + ORR1A2-int LTR MaLR 1 1963 0 4 1136 2179 102 41 0 chrX 72315891 72316205 -94334091 + ORR1A2 LTR MaLR 1 327 0 4 1136 668 326 0 21 chrX 72316492 72316683 -94333613 - ID_B1 SINE B4 0 224 38 4 1136 859 183 0 21 chrX 72316692 72316837 -94333459 + B1_Mus2 SINE Alu 5 146 -1 4 1136 5603 192 58 48 chrX 72317008 72317688 -94332608 - Lx6 LINE L1 -2 7458 6768 4 1136 234 0 0 0 chrX 72317688 72317714 -94332582 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 1136 5603 192 58 48 chrX 72317714 72318327 -94331969 - Lx6 LINE L1 -693 6767 6152 4 1136 257 157 0 0 chrX 72318326 72318377 -94331919 - Lx7 LINE L1 -1672 6024 5974 4 1136 2252 79 3 60 chrX 72318385 72318721 -94331575 - ORR1A2 LTR MaLR -8 319 3 4 1136 7897 200 77 4 chrX 72318730 72320732 -94329564 - Lx7 LINE L1 -1734 5962 3786 4 1136 2628 181 72 33 chrX 72320753 72321299 -94328997 - Lx7 LINE L1 -7029 699 122 4 1136 1401 93 0 5 chrX 72321299 72321493 -94328803 - B2_Mm2 SINE B2 -2 193 1 4 1136 2628 181 72 33 chrX 72321493 72321587 -94328709 - Lx7 LINE L1 -7607 121 34 4 1136 2030 164 49 37 chrX 72321740 72322171 -94328125 + RMER10A LTR ERVL 2 437 -5 4 1136 258 32 0 0 chrX 72322171 72322202 -94328094 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 1136 348 280 118 0 chrX 72322334 72322427 -94327869 - B1F SINE Alu -45 104 1 4 1136 387 274 86 37 chrX 72322643 72322806 -94327490 + L1M2 LINE L1 3041 3211 -2932 4 1136 568 211 130 0 chrX 72322827 72322950 -94327346 - B1_Mus2 SINE Alu 0 147 9 4 1136 248 261 80 80 chrX 72322861 72322961 -94327335 - MT2B LTR ERVL -337 264 165 4 1136 614 229 34 29 chrX 72322966 72323205 -94327091 + L1M2 LINE L1 3198 3437 -2706 4 1136 404 234 0 38 chrX 72323214 72323294 -94327002 + B4A SINE B4 19 95 -197 4 1136 1616 49 0 0 chrX 72323295 72323498 -94326798 + L1Md_F2 LINE L1 5383 5585 -298 4 1136 7891 54 0 4 chrX 72323499 72324487 -94325809 + L1Md_F2 LINE L1 5587 6570 -12 4 1136 216 317 0 0 chrX 72324526 72324586 -94325710 + PB1 SINE Alu 1 60 -67 4 1136 26 0 0 0 chrX 72324725 72324751 -94325545 + AT_rich Low_complexity Low_complexity 1 26 0 4 1136 943 295 63 19 chrX 72324769 72325419 -94324877 + L1MD LINE L1 3095 3773 -2373 4 1136 302 237 38 50 chrX 72325478 72325558 -94324738 + ID4_ SINE ID 1 79 -4 4 1136 575 291 7 13 chrX 72325574 72325724 -94324572 + B1F SINE Alu 1 149 0 4 1136 331 301 81 0 chrX 72325805 72325978 -94324318 + L1M4 LINE L1 4626 4812 -1334 4 1136 477 286 64 0 chrX 72326024 72326164 -94324132 + B1F SINE Alu 1 149 0 4 1136 272 275 19 28 chrX 72326165 72326273 -94324023 + L1MD LINE L1 5159 5265 -881 4 1136 855 308 62 9 chrX 72326339 72326565 -94323731 - B4A SINE B4 -3 289 52 4 1136 244 288 78 18 chrX 72326591 72326757 -94323539 + L1MC LINE L1 5704 5879 -2003 4 1136 207 0 0 0 chrX 72326892 72326915 -94323381 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 4 1136 24 53 0 0 chrX 72327460 72327498 -94322798 + AT_rich Low_complexity Low_complexity 1 38 0 4 1136 922 58 7 21 chrX 72327498 72327638 -94322658 + L1Md_F2 LINE L1 6445 6582 0 4 1136 189 0 0 0 chrX 72327660 72327681 -94322615 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1136 486 0 0 0 chrX 72327953 72328007 -94322289 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 1136 1050 84 0 0 chrX 72328030 72328173 -94322123 + B1_Mus1 SINE Alu 6 148 0 4 1136 213 65 0 0 chrX 72328173 72328204 -94322092 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1136 1243 89 0 6 chrX 72328207 72328377 -94321919 - B2_Mm2 SINE B2 -25 170 2 4 1136 703 188 47 0 chrX 72328480 72328608 -94321688 + B1_Mm SINE Alu 2 135 -12 4 1136 669 150 0 0 chrX 72330082 72330229 -94320067 + (CTG)n Simple_repeat Simple_repeat 2 148 0 4 1136 295 60 40 0 chrX 72330406 72330456 -94319840 + (CGGGGG)n Simple_repeat Simple_repeat 6 57 0 4 1136 205 229 159 57 chrX 72331031 72331119 -94319177 - MIR SINE MIR -6 256 160 4 1136 1133 120 0 12 chrX 72331244 72331412 -94318884 + B2_Mm2 SINE B2 2 167 -28 4 1136 42 95 0 0 chrX 72331414 72331540 -94318756 + AT_rich Low_complexity Low_complexity 1 126 0 4 1136 1200 43 0 0 chrX 72331602 72331741 -94318555 + B1_Mus1 SINE Alu 3 141 -7 4 1136 270 116 0 0 chrX 72331741 72331784 -94318512 + (CAAT)n Simple_repeat Simple_repeat 2 44 0 4 1136 3238 48 13 0 chrX 72332823 72333218 -94317078 + MTB LTR MaLR 1 400 0 4 1136 429 248 29 69 chrX 72333226 72333246 -94317050 + CYRA11_Mm Unknown Y-chromosome 158 170 -447 4 1136 1107 174 34 76 chrX 72333246 72333482 -94316814 - URR1A DNA MER1_type 0 226 1 4 1136 428 332 30 48 chrX 72333575 72333971 -94316325 - ERVL-E-int LTR ERVL -631 5036 4648 4 1136 875 188 0 0 chrX 72334116 72334265 -94316031 + B1_Mur3 SINE Alu 1 149 0 4 1136 35 24 0 0 chrX 72334280 72334322 -94315974 + AT_rich Low_complexity Low_complexity 1 42 0 4 1136 686 284 26 6 chrX 72334815 72334971 -94315325 + B3A SINE B2 13 171 -27 4 1136 1063 251 55 17 chrX 72335426 72335843 -94314453 + L1MD LINE L1 3624 4056 -2090 4 1136 578 168 114 9 chrX 72335844 72335958 -94314338 + B1_Mur2 SINE Alu 24 149 0 4 1136 236 30 30 0 chrX 72335959 72335992 -94314304 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1136 539 123 558 0 chrX 72335998 72336136 -94314160 + B3 SINE B2 2 216 0 4 1136 513 319 41 7 chrX 72336177 72336322 -94313974 + B3 SINE B2 30 179 -37 4 1136 2370 82 6 0 chrX 72336328 72336645 -94313651 + ORR1A2 LTR MaLR 1 319 -8 4 1136 30 27 0 0 chrX 72336651 72336688 -94313608 + AT_rich Low_complexity Low_complexity 1 37 0 4 1136 667 32 0 0 chrX 72336688 72336776 -94313520 + B1_Mus2 SINE Alu 53 140 -9 4 1136 231 61 0 0 chrX 72336776 72336809 -94313487 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 4 1136 614 226 24 8 chrX 72336829 72336954 -94313342 - B1F SINE Alu -22 127 1 4 1136 500 228 14 8 chrX 72336962 72337108 -94313188 - L1MD LINE L1 -891 5255 5104 5 1136 185 0 40 0 chrX 72337111 72337136 -94313160 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 5 1136 797 203 0 7 chrX 72337138 72337287 -94313009 - B1_Mur3 SINE Alu 0 149 2 5 1136 1064 137 57 0 chrX 72337328 72337503 -94312793 - B2_Mm2 SINE B2 -10 185 1 5 1136 353 130 0 44 chrX 72337504 72337565 -94312731 + (TTTG)n Simple_repeat Simple_repeat 4 61 0 5 1136 1075 96 14 0 chrX 72337565 72337711 -94312585 - B1_Mus1 SINE Alu 0 148 1 5 1136 353 130 0 44 chrX 72337711 72337762 -94312534 + (TTTG)n Simple_repeat Simple_repeat 3 51 0 5 1136 210 71 0 0 chrX 72337800 72337828 -94312468 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 5 1136 872 35 0 17 chrX 72337829 72337944 -94312352 - B1_Mus1 SINE Alu 0 148 36 5 1136 3084 47 46 18 chrX 72338283 72338672 -94311624 - MTB LTR MaLR 0 400 1 5 1136 233 107 39 39 chrX 72338694 72338772 -94311524 + T-rich Low_complexity Low_complexity 3 80 0 5 1136 1207 34 0 13 chrX 72338779 72338928 -94311368 - B1_Mm SINE Alu 0 147 1 5 1136 563 190 147 0 chrX 72338933 72339049 -94311247 - B1_Mur3 SINE Alu -16 133 1 5 1136 258 186 0 23 chrX 72339077 72339121 -94311175 + B1_Mus1 SINE Alu 2 44 -104 5 1136 339 25 0 0 chrX 72339122 72339162 -94311134 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 1136 235 219 0 79 chrX 72339163 72339252 -94311044 + L1M1 LINE L1 5795 5876 -424 5 1136 324 0 0 0 chrX 72339757 72339793 -94310503 + (CTCA)n Simple_repeat Simple_repeat 4 39 0 5 1136 186 103 0 0 chrX 72340239 72340268 -94310028 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1136 537 273 136 41 chrX 72340579 72340873 -94309423 + MER33 DNA MER1_type 1 322 -2 5 1136 186 43 0 0 chrX 72341280 72341303 -94308993 + (TCC)n Simple_repeat Simple_repeat 2 24 0 5 1136 280 159 37 0 chrX 72342793 72342851 -94307445 + B1F SINE Alu 64 143 -6 5 1136 1305 77 43 16 chrX 72343059 72343243 -94307053 - B2_Mm2 SINE B2 -4 191 3 5 1136 35 0 0 0 chrX 72343487 72343522 -94306774 + AT_rich Low_complexity Low_complexity 1 35 0 5 1136 258 250 12 122 chrX 72343533 72343615 -94306681 - RSINE1 SINE B4 -1 164 92 5 1136 935 92 61 8 chrX 72344546 72344678 -94305618 - B1_Mur4 SINE Alu -8 142 4 5 1136 1178 51 0 0 chrX 72344923 72345061 -94305235 - B1_Mus1 SINE Alu -9 139 2 5 1136 316 306 0 0 chrX 72345071 72345156 -94305140 - PB1D10 SINE Alu -7 110 26 5 1136 459 254 50 43 chrX 72346061 72346201 -94304095 - B1_Mur2 SINE Alu -4 145 5 5 1136 576 40 0 0 chrX 72346231 72346306 -94303990 + (TC)n Simple_repeat Simple_repeat 2 76 0 5 1136 801 184 13 26 chrX 72346534 72346685 -94303611 - B1_Mur4 SINE Alu -1 149 1 5 1136 1341 89 16 10 chrX 72346826 72347018 -94303278 + B2_Mm2 SINE B2 1 193 -2 5 1136 921 47 107 15 chrX 72347046 72347177 -94303119 + B1_Mus1 SINE Alu 1 143 -5 5 1136 400 108 24 24 chrX 72347179 72347264 -94303032 + GA-rich Low_complexity Low_complexity 3 87 0 5 1136 245 292 57 3 chrX 72347328 72347416 -94302880 + ID4 SINE ID 5 91 -61 5 1136 952 55 55 0 chrX 72347542 72347669 -94302627 + B1_Mus2 SINE Alu 1 134 -13 5 1136 301 45 0 0 chrX 72348389 72348433 -94301863 - L1_Mus2 LINE L1 0 6566 6523 5 1136 642 233 78 26 chrX 72348433 72348587 -94301709 - RSINE1 SINE B4 -2 163 2 5 1136 763 256 60 10 chrX 72348609 72348810 -94301486 - B3 SINE B2 -5 211 1 5 1136 241 366 24 0 chrX 72348935 72349017 -94301279 - RSINE1 SINE B4 0 165 82 5 1136 3170 45 8 0 chrX 72349197 72349579 -94300717 + IAPEY_LTR LTR ERVK 1 385 0 5 1136 797 112 36 22 chrX 72350123 72350260 -94300036 - B1_Mus2 SINE Alu 0 147 9 5 1136 1211 41 7 0 chrX 72350636 72350782 -94299514 - B1_Mus1 SINE Alu 0 148 2 5 1137 1881 129 197 6 chrX 72351773 72352139 -94298157 - RMER1B Other Other -20 1046 611 5 1137 481 145 254 41 chrX 72352626 72352748 -94297548 + B1_Mur4 SINE Alu 1 148 -2 5 1137 183 129 0 0 chrX 72353570 72353601 -94296695 + (GAA)n Simple_repeat Simple_repeat 1 31 0 5 1137 1188 68 0 0 chrX 72354725 72354871 -94295425 + B1_Mus2 SINE Alu 2 147 0 5 1137 435 128 0 0 chrX 72354874 72354960 -94295336 + (A)n Simple_repeat Simple_repeat 1 86 0 5 1137 245 262 155 0 chrX 72356740 72356824 -94293472 - ID_B1 SINE B4 -20 204 108 5 1137 533 291 47 8 chrX 72358030 72358158 -94292138 + RSINE1 SINE B4 32 164 -1 5 1137 390 21 0 0 chrX 72358386 72358433 -94291863 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1137 451 304 52 0 chrX 72358436 72358551 -94291745 - RSINE1 SINE B4 -21 144 24 5 1137 433 151 0 41 chrX 72358601 72358698 -94291598 + CT-rich Low_complexity Low_complexity 4 96 0 5 1137 349 274 48 0 chrX 72358700 72358784 -94291512 - B4 SINE B4 -204 88 1 5 1137 192 227 40 129 chrX 72359083 72359184 -94291112 - L3 LINE CR1 -2734 1755 1664 5 1137 936 232 88 112 chrX 72360757 72361097 -94289199 + MER2 DNA MER2_type 4 335 -10 5 1137 380 245 146 10 chrX 72361944 72362047 -94288249 - PB1D10 SINE Alu 0 117 1 5 1137 241 318 15 0 chrX 72362058 72362124 -94288172 - MER112 DNA MER1_type -184 77 11 5 1137 712 167 51 15 chrX 72362415 72362610 -94287686 + Lx9 LINE L1 7440 7641 -3 5 1137 225 175 0 34 chrX 72363725 72363784 -94286512 + L1ME3A LINE L1 5686 5742 -382 5 1137 1197 27 7 7 chrX 72363932 72364079 -94286217 + B1_Mm SINE Alu 1 147 0 5 1137 1191 68 0 0 chrX 72364200 72364348 -94285948 + B1_Mus1 SINE Alu 1 148 0 5 1137 243 286 81 103 chrX 72364375 72364505 -94285791 + L1M5 LINE L1 3881 4025 -2121 5 1137 596 229 124 17 chrX 72364505 72364683 -94285613 + B3A SINE B2 1 197 -1 5 1137 243 286 81 103 chrX 72364683 72364786 -94285510 + L1M5 LINE L1 4026 4109 -2037 5 1137 526 79 0 13 chrX 72364951 72365028 -94285268 - B1_Mm SINE Alu 0 147 72 5 1137 525 66 0 38 chrX 72365013 72365092 -94285204 + B1_Mus2 SINE Alu 72 147 0 5 1137 283 281 219 0 chrX 72365318 72365514 -94284782 + L1ME3A LINE L1 5905 6143 -30 5 1137 821 261 15 2 chrX 72365598 72365791 -94284505 - B3A SINE B2 -19 197 2 5 1137 711 284 62 71 chrX 72365920 72366144 -94284152 + B4 SINE B4 2 223 -69 5 1137 791 263 93 61 chrX 72366151 72366378 -94283918 + B4A SINE B4 1 217 -75 5 1137 243 0 0 0 chrX 72366378 72366405 -94283891 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 5 1137 791 263 93 61 chrX 72366405 72366456 -94283840 + B4A SINE B4 218 287 -5 5 1137 291 192 122 14 chrX 72367074 72367148 -94283148 - PB1D10 SINE Alu 0 117 36 5 1137 335 158 73 0 chrX 72367370 72367452 -94282844 - L1MA7 LINE L1 -100 6191 6104 5 1137 2693 36 3 3 chrX 72367454 72367785 -94282511 + L1Md_F2 LINE L1 6249 6579 -3 5 1137 1245 28 0 0 chrX 72367817 72367961 -94282335 + B1_Mus2 SINE Alu 2 145 -2 5 1137 288 0 0 0 chrX 72367961 72367993 -94282303 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 5 1137 859 249 107 11 chrX 72368016 72368296 -94282000 - L1MA7 LINE L1 -286 6005 5699 5 1137 602 211 0 9 chrX 72370206 72370316 -94279980 + PB1D9 SINE Alu 1 109 -11 5 1137 879 151 7 0 chrX 72370410 72370549 -94279747 - B1_Mus2 SINE Alu -7 140 1 5 1137 26 50 0 0 chrX 72371310 72371350 -94278946 + AT_rich Low_complexity Low_complexity 1 40 0 5 1137 631 267 55 73 chrX 72371477 72371585 -94278711 + B3 SINE B2 3 110 -106 5 1137 1409 62 11 0 chrX 72371585 72371763 -94278533 + B2_Mm2 SINE B2 1 180 -15 5 1137 631 267 55 73 chrX 72371763 72371872 -94278424 + B3 SINE B2 111 216 0 5 1137 21 0 0 0 chrX 72372145 72372166 -94278130 + GC_rich Low_complexity Low_complexity 1 21 0 5 1137 1075 82 0 0 chrX 72372890 72373024 -94277272 - B1_Mus1 SINE Alu -12 136 3 5 1137 250 314 58 25 chrX 72373055 72373176 -94277120 + MIRb SINE MIR 55 179 -89 5 1137 419 245 61 61 chrX 72374765 72374913 -94275383 + B1F SINE Alu 1 148 -1 5 1137 297 128 0 0 chrX 72377096 72377143 -94273153 + (GAGAA)n Simple_repeat Simple_repeat 5 51 0 5 1137 1007 280 9 0 chrX 72377342 72377556 -94272740 + ID_B1 SINE B4 6 221 -3 5 1137 1547 143 29 4 chrX 72377724 72377969 -94272327 - Lx4A LINE L1 -6 7052 6802 5 1137 589 324 0 0 chrX 72378000 72378145 -94272151 + ID_B1 SINE B4 80 224 0 5 1137 881 306 97 12 chrX 72378159 72378417 -94271879 + B4A SINE B4 1 280 -12 5 1137 243 125 0 0 chrX 72378471 72378511 -94271785 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1137 1101 58 7 0 chrX 72378521 72378659 -94271637 + B1_Mm SINE Alu 1 139 -8 5 1137 405 54 0 0 chrX 72378659 72378715 -94271581 + (CAA)n Simple_repeat Simple_repeat 2 57 0 5 1137 367 299 109 13 chrX 72379073 72379229 -94271067 + RMER15 LTR ERVL 347 517 -58 5 1137 225 241 48 0 chrX 72379268 72379351 -94270945 + L1M LINE L1 5282 5368 -756 5 1137 246 65 0 0 chrX 72379358 72379387 -94270909 + ORR1C2 LTR MaLR 3 31 -353 5 1137 673 96 0 0 chrX 72379387 72379481 -94270815 + B2_Mm2 SINE B2 2 95 -100 5 1137 369 90 102 114 chrX 72379438 72379526 -94270770 + B1_Mm SINE Alu 61 147 0 5 1137 425 73 0 0 chrX 72379541 72379596 -94270700 + ORR1C2 LTR MaLR 330 384 0 5 1137 2054 159 5 77 chrX 72379731 72380120 -94270176 - ORR1C1 LTR MaLR 0 378 18 5 1137 810 260 76 14 chrX 72380277 72380488 -94269808 - MLT1A0 LTR MaLR -3 362 139 5 1137 491 244 12 12 chrX 72380588 72380721 -94269575 + B1_Mur1 SINE Alu 12 141 -8 5 1137 683 179 106 0 chrX 72380808 72380931 -94269365 + B1_Mur2 SINE Alu 1 136 -13 5 1137 258 81 0 0 chrX 72380932 72380969 -94269327 + (CAAAG)n Simple_repeat Simple_repeat 2 38 0 6 1137 1024 107 12 6 chrX 72380970 72381140 -94269156 + (GAAA)n Simple_repeat Simple_repeat 1 171 0 6 1137 594 230 18 0 chrX 72381166 72381279 -94269017 + B3A SINE B2 23 137 -61 6 1137 360 0 0 0 chrX 72381289 72381329 -94268967 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1137 307 297 117 9 chrX 72381403 72381634 -94268662 + L1M5 LINE L1 4427 4682 -1464 6 1137 471 279 2 14 chrX 72381637 72381750 -94268546 + B1F1 SINE Alu 1 111 -6 6 1137 854 216 28 33 chrX 72381769 72381980 -94268316 + B3 SINE B2 1 210 -6 6 1137 25 31 0 0 chrX 72381986 72382018 -94268278 + AT_rich Low_complexity Low_complexity 1 32 0 6 1137 366 332 140 9 chrX 72382057 72382285 -94268011 + L1M5 LINE L1 4672 4929 -1217 6 1137 215 204 0 0 chrX 72382754 72382770 -94267526 + A-rich Low_complexity Low_complexity 1 16 0 6 1137 902 167 7 0 chrX 72382770 72382914 -94267382 + B1_Mus2 SINE Alu 3 147 0 6 1137 215 204 0 0 chrX 72382914 72382951 -94267345 + A-rich Low_complexity Low_complexity 17 53 0 6 1137 872 204 126 35 chrX 72383134 72383174 -94267122 + B3 SINE B2 1 35 -181 6 1137 1610 176 52 169 chrX 72383174 72383659 -94266637 + RLTR23 LTR ERV1 1 428 -2 6 1137 872 204 126 35 chrX 72383659 72383816 -94266480 + B3 SINE B2 36 216 0 6 1137 7898 143 32 41 chrX 72383880 72386003 -94264293 + Lx4B LINE L1 4981 7058 0 6 1137 986 148 0 7 chrX 72386075 72386225 -94264071 + B1_Mur4 SINE Alu 1 149 -1 6 1137 183 42 0 0 chrX 72386228 72386252 -94264044 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 6 1137 336 328 26 9 chrX 72386314 72386428 -94263868 + PB1 SINE Alu 4 119 -8 6 1137 590 277 7 0 chrX 72386436 72386573 -94263723 + B1F SINE Alu 1 138 -11 6 1137 1240 34 7 0 chrX 72386626 72386772 -94263524 + B1_Mus2 SINE Alu 1 147 0 6 1137 728 201 7 14 chrX 72386810 72386951 -94263345 + B1_Mur1 SINE Alu 1 140 -9 6 1137 900 238 10 15 chrX 72386975 72387180 -94263116 - B3 SINE B2 -10 206 3 6 1137 706 201 0 0 chrX 72387212 72387346 -94262950 - B1_Mus2 SINE Alu -13 134 1 6 1137 28 22 0 22 chrX 72387492 72387505 -94262791 + AT_rich Low_complexity Low_complexity 1 13 0 6 1137 1251 27 0 0 chrX 72387505 72387652 -94262644 + B1_Mm SINE Alu 1 147 0 6 1137 28 22 0 22 chrX 72387652 72387684 -94262612 + AT_rich Low_complexity Low_complexity 1 32 0 6 1137 712 35 254 17 chrX 72387842 72387960 -94262336 - B1_Mus2 SINE Alu -1 146 1 6 1137 1335 78 50 11 chrX 72388347 72388528 -94261768 + B2_Mm2 SINE B2 3 190 -5 6 1137 721 214 0 0 chrX 72390789 72390906 -94259390 + RSINE1 SINE B4 34 150 -15 6 1137 2019 126 63 15 chrX 72390935 72391266 -94259030 + ORR1B2 LTR MaLR 13 359 -8 6 1137 598 217 6 95 chrX 72391929 72392087 -94258209 + B4 SINE B4 1 144 -148 6 1137 274 203 55 78 chrX 72392101 72392229 -94258067 + RLTR25B LTR ERVK 397 521 -507 6 1137 876 38 0 0 chrX 72392145 72392251 -94258045 + B1_Mm SINE Alu 42 147 0 6 1137 279 0 0 0 chrX 72392259 72392290 -94258006 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1137 462 296 95 36 chrX 72392307 72392475 -94257821 + B4A SINE B4 115 292 0 6 1137 252 0 0 0 chrX 72392486 72392514 -94257782 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 1137 261 229 79 63 chrX 72392717 72392843 -94257453 - L1MC LINE L1 -2091 5791 5664 6 1137 3856 67 21 2 chrX 72393221 72393703 -94256593 - Lx3_Mus LINE L1 0 7009 6519 6 1137 348 336 43 8 chrX 72393943 72394060 -94256236 + LTR16A LTR ERVL 21 141 -310 6 1137 614 313 107 46 chrX 72394315 72394643 -94255653 - MLT1J-int LTR MaLR -108 1279 932 6 1137 2377 87 9 58 chrX 72395785 72396127 -94254169 + ORR1A2 LTR MaLR 1 325 -2 6 1137 10325 123 73 14 chrX 72396127 72397948 -94252348 + ORR1A2-int LTR MaLR 3 1931 -32 6 1137 3469 34 0 0 chrX 72398047 72398435 -94251861 + L1Md_A LINE L1 6193 6580 -2 6 1137 1293 112 0 43 chrX 72398439 72398625 -94251671 - B2_Mm2 SINE B2 -14 181 4 6 1137 3919 55 2 0 chrX 72398638 72399091 -94251205 - L1_Mus1 LINE L1 0 6567 6114 6 1137 3604 83 5 94 chrX 72399096 72399301 -94250995 + L1_Mus3 LINE L1 5588 5792 -846 6 1137 1296 41 0 0 chrX 72399301 72399447 -94250849 + B1_Mus2 SINE Alu 2 147 0 6 1137 3604 83 5 94 chrX 72399447 72399816 -94250480 + L1_Mus3 LINE L1 5793 6111 -527 6 1137 1079 282 28 16 chrX 72399942 72400263 -94250033 - RLTR16 LTR ERVK -79 426 102 6 1137 3547 77 12 0 chrX 72400407 72400890 -94249406 + Lx3A LINE L1 3973 4461 -1425 6 1137 208 309 0 0 chrX 72400893 72400961 -94249335 + G-rich Low_complexity Low_complexity 1 68 0 6 1137 21 57 0 0 chrX 72401001 72401036 -94249260 + GC_rich Low_complexity Low_complexity 1 35 0 6 1137 25 0 0 0 chrX 72401274 72401299 -94248997 + GC_rich Low_complexity Low_complexity 1 25 0 6 1137 246 62 0 0 chrX 72401882 72401914 -94248382 + (A)n Simple_repeat Simple_repeat 1 32 0 6 1137 9478 73 14 38 chrX 72401916 72403112 -94247184 + Lx3A LINE L1 4451 5619 -267 6 1137 2843 37 46 0 chrX 72403112 72403439 -94246857 - ORR1A1 LTR MaLR -4 342 1 6 1137 9478 73 14 38 chrX 72403439 72403595 -94246701 + Lx3A LINE L1 5620 5770 -116 6 1137 12081 74 24 9 chrX 72403601 72405322 -94244974 + ORR1A1-int LTR MaLR 35 1782 -10 6 1137 3048 58 0 0 chrX 72405332 72405678 -94244618 + ORR1A1 LTR MaLR 1 346 0 6 1137 6948 89 17 7 chrX 72405678 72406610 -94243686 + Lx3A LINE L1 6037 6978 -3 6 1137 314 304 177 38 chrX 72407300 72407673 -94242623 + L2a LINE L2 2935 3359 -67 6 1137 22 0 0 0 chrX 72407694 72407716 -94242580 + AT_rich Low_complexity Low_complexity 1 22 0 6 1137 450 333 63 32 chrX 72407727 72407885 -94242411 - RSINE1 SINE B4 0 165 3 6 1137 1562 83 9 5 chrX 72409701 72409919 -94240377 + Lx3_Mus LINE L1 6791 7009 0 6 1137 4427 146 109 31 chrX 72409984 72410810 -94239486 + RMER19B LTR ERVK 1 890 -12 6 1137 311 293 12 24 chrX 72411182 72411266 -94239030 + ID4_ SINE ID 1 83 0 6 1137 381 405 43 39 chrX 72411481 72411576 -94238720 - MLT2F LTR ERVL -172 491 401 6 1137 701 206 40 54 chrX 72411576 72411725 -94238571 - B1_Mur1 SINE Alu 0 149 3 6 1137 381 405 43 39 chrX 72411725 72411886 -94238410 - MLT2F LTR ERVL -263 400 234 6 1137 607 345 19 15 chrX 72412135 72412341 -94237955 + MER45B DNA Tip100 61 267 -773 6 1137 967 249 51 22 chrX 72412355 72412630 -94237666 + RLTR22_Mur LTR ERVK 1 283 -1565 6 1137 4187 98 13 7 chrX 72412630 72413225 -94237071 + Lx3A LINE L1 6347 6945 -36 6 1137 263 253 10 40 chrX 72413282 72413381 -94236915 + RLTR22_Mus LTR ERVK 969 1064 -744 6 1137 1468 214 83 52 chrX 72413367 72413810 -94236486 + RLTR22_Mur LTR ERVK 1201 1657 -191 6 1137 402 263 54 76 chrX 72414096 72414281 -94236015 + RMER12 LTR ERVK 1142 1322 0 6 1137 440 279 65 27 chrX 72414311 72414495 -94235801 + MER45B DNA Tip100 399 589 -451 6 1137 553 273 71 32 chrX 72414496 72414749 -94235547 - MER45B DNA Tip100 -179 861 599 6 1137 1203 254 33 25 chrX 72414788 72415063 -94235233 - B4 SINE B4 -6 286 10 6 1137 243 146 0 0 chrX 72415221 72415262 -94235034 + (TCCC)n Simple_repeat Simple_repeat 4 44 0 6 1137 300 188 73 89 chrX 72415450 72415573 -94234723 - Lx8 LINE L1 0 7473 7353 6 1137 241 312 109 23 chrX 72415692 72415866 -94234430 - LTR37B LTR ERV1 -60 408 220 6 1137 806 268 88 55 chrX 72416389 72416697 -94233599 - L1M2 LINE L1 -497 5815 5498 6 1137 1351 86 26 21 chrX 72416713 72416903 -94233393 - B2_Mm2 SINE B2 -4 191 1 6 1137 467 312 32 24 chrX 72416912 72417165 -94233131 - L1M2 LINE L1 -888 5255 5001 6 1137 186 133 0 0 chrX 72417287 72417317 -94232979 + (TATATG)n Simple_repeat Simple_repeat 3 32 0 6 1137 321 279 0 46 chrX 72417317 72417426 -94232870 + HAL1-3A_ME LINE L1 1975 2078 -780 6 1137 2258 131 39 60 chrX 72417764 72418146 -94232150 + ORR1C1 LTR MaLR 5 378 0 6 1137 234 229 25 136 chrX 72418538 72418619 -94231677 - MER5B DNA MER1_type -27 151 80 6 1137 911 269 26 0 chrX 72418714 72418907 -94231389 + B3 SINE B2 1 198 -18 6 1137 274 255 75 0 chrX 72418937 72419031 -94231265 + L2 LINE L2 2866 2966 -453 6 1137 3531 103 4 19 chrX 72419090 72419616 -94230680 + MusHAL1 LINE L1 1069 1586 -1126 6 1137 11941 187 81 65 chrX 72419904 72423505 -94226791 - L1Md_F2 LINE L1 0 6582 2841 6 1137 225 183 46 77 chrX 72423505 72423570 -94226726 - RMER20A LTR ERVK -268 248 186 6 1137 11941 187 81 65 chrX 72423570 72424224 -94226072 - L1Md_F2 LINE L1 0 2840 2160 6 1137 8904 34 0 0 chrX 72424224 72425207 -94225089 + L1Md_T LINE L1 5587 6569 -13 6 1137 11941 184 45 54 chrX 72425207 72426968 -94223328 - L1Md_F2 LINE L1 -3727 2159 217 6 1137 1926 113 81 16 chrX 72426985 72427384 -94222912 + L1_Mur1 LINE L1 2787 3293 -2593 6 1137 21 36 0 0 chrX 72427953 72427981 -94222315 + AT_rich Low_complexity Low_complexity 1 28 0 6 1137 1216 82 0 0 chrX 72427981 72428128 -94222168 + B1_Mus2 SINE Alu 1 147 0 6 1137 216 0 0 0 chrX 72428149 72428173 -94222123 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 6 1137 1178 71 0 0 chrX 72428173 72428328 -94221968 - B2_Mm2 SINE B2 -37 158 4 6 1137 231 311 38 28 chrX 72428415 72428521 -94221775 - L1MC4 LINE L1 -598 7444 7338 6 1137 715 275 104 18 chrX 72428567 72428845 -94221451 - L1MC4 LINE L1 -1032 7010 6709 6 1137 21 0 0 0 chrX 72428850 72428871 -94221425 + AT_rich Low_complexity Low_complexity 1 21 0 6 1137 225 357 0 0 chrX 72429067 72429137 -94221159 - MLT1H2 LTR MaLR -345 144 75 6 1137 225 329 0 13 chrX 72429325 72429402 -94220894 - L1MC4 LINE L1 -5496 719 644 6 1137 477 330 32 32 chrX 72429700 72429916 -94220380 - L1M3e LINE L1 -6801 229 14 6 1137 940 42 8 0 chrX 72429951 72430071 -94220225 - L1Md_T LINE L1 0 6582 6462 6 1137 2754 16 0 0 chrX 72430071 72430383 -94219913 + L1Md_T LINE L1 5730 6041 -541 6 1137 949 143 21 0 chrX 72430441 72430581 -94219715 - B1_Mur3 SINE Alu -6 143 1 6 1137 2587 100 13 16 chrX 72430633 72431018 -94219278 + Lx2 LINE L1 6603 6986 -11 6 1137 2056 111 12 48 chrX 72431315 72431646 -94218650 + ORR1A2 LTR MaLR 1 319 -8 6 1137 3441 250 41 16 chrX 72431667 72431781 -94218515 + Lx8 LINE L1 6178 6294 -1179 6 1137 2292 182 110 89 chrX 72431781 72432267 -94218029 + MT2A LTR ERVL 1 498 -35 6 1137 312 27 0 0 chrX 72432267 72432304 -94217992 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1137 2292 182 110 89 chrX 72432304 72432335 -94217961 + MT2A LTR ERVL 499 529 -4 6 1137 3441 250 41 16 chrX 72432335 72433044 -94217252 + Lx8 LINE L1 6295 7022 -451 6 1137 2183 89 53 0 chrX 72433087 72433390 -94216906 + ORR1A2 LTR MaLR 1 319 -8 7 1137 23375 114 34 50 chrX 72433393 72434871 -94215425 + MERVL-int LTR ERVL 3 1461 -4024 7 1137 2539 86 169 0 chrX 72434871 72435231 -94215065 - BGLII LTR ERVK 0 421 1 7 1137 23375 114 34 50 chrX 72435231 72437437 -94212859 + MERVL-int LTR ERVL 1462 3628 -1857 7 1137 359 84 375 10 chrX 72437483 72437579 -94212717 + MERVL_2A-int LTR ERVL 5499 5629 -132 7 1137 287 206 13 40 chrX 72437579 72437655 -94212641 + ORR1A3-int LTR MaLR 567 640 -1323 7 1137 916 149 15 10 chrX 72437688 72437848 -94212448 + MT2B2 LTR ERVL 397 584 0 7 1137 536 282 15 0 chrX 72437856 72437987 -94212309 + Lx8 LINE L1 7056 7188 -285 6 1137 1041 108 11 6 chrX 72438773 72438950 -94211346 + (TTCCC)n Simple_repeat Simple_repeat 3 180 0 7 1137 1281 62 0 0 chrX 72439437 72439583 -94210713 + B1_Mus2 SINE Alu 2 147 0 7 1137 36234 31 1 0 chrX 72439639 72446763 -94203533 - L1Md_T LINE L1 0 6585 1 7 1137 391 311 53 75 chrX 72447145 72447503 -94202793 + RodERV21-int LTR ERV1 1633 1982 -3009 7 1137 653 261 84 60 chrX 72447385 72447719 -94202577 + MYSERV6-int LTR ERVK 8169 8510 -449 7 1137 201 74 0 0 chrX 72448640 72448667 -94201629 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 1137 255 314 29 0 chrX 72448723 72448793 -94201503 - B4 SINE B4 -6 286 215 7 1137 774 135 136 74 chrX 72448804 72448980 -94201316 - B2_Mm2 SINE B2 -8 187 1 7 1137 570 316 89 37 chrX 72449020 72449234 -94201062 - B4 SINE B4 -64 228 4 7 1137 212 100 0 24 chrX 72449315 72449356 -94200940 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1137 267 103 0 0 chrX 72450348 72450387 -94199909 + (TTC)n Simple_repeat Simple_repeat 2 40 0 7 1137 1842 43 29 38 chrX 72450412 72450651 -94199645 - L1Md_F2 LINE L1 -2 6580 6344 7 1137 2695 153 87 23 chrX 72450922 72451438 -94198858 + RLTR12A LTR ERVK 1 549 -19 7 1137 549 80 0 0 chrX 72451450 72451525 -94198771 + (TA)n Simple_repeat Simple_repeat 2 76 0 7 1137 491 165 0 0 chrX 72452298 72452377 -94197919 + RMER17C LTR ERVK 1 79 -331 7 1137 2061 175 112 74 chrX 72452374 72452849 -94197447 + RLTR21 LTR ERVK 120 612 -960 7 1137 189 0 0 0 chrX 72452849 72452870 -94197426 + (TAA)n Simple_repeat Simple_repeat 1 21 0 7 1137 516 237 46 51 chrX 72452884 72453080 -94197216 - RLTR15 LTR ERVK 0 359 165 7 1137 2459 69 63 0 chrX 72453112 72453431 -94196865 - L1Md_F2 LINE L1 0 6582 6244 7 1137 538 195 225 11 chrX 72453587 72453774 -94196522 - RLTR15 LTR ERVK -132 227 1 7 1137 1386 177 160 39 chrX 72453775 72454157 -94196139 + RLTR21 LTR ERVK 629 1056 -516 7 1137 243 0 0 0 chrX 72454185 72454212 -94196084 + (TC)n Simple_repeat Simple_repeat 2 28 0 7 1137 432 0 0 0 chrX 72454212 72454259 -94196037 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 1137 498 94 22 45 chrX 72454265 72454354 -94195942 + RMER12B LTR ERVK 1276 1362 -42 7 1137 260 222 22 0 chrX 72454393 72454438 -94195858 - B1_Mus2 SINE Alu -100 47 2 7 1137 394 141 0 1 chrX 72454693 72454753 -94195543 + ORR1A2 LTR MaLR 5 64 -282 7 1137 1259 36 0 0 chrX 72454753 72454893 -94195403 - B1_Mm SINE Alu -6 141 2 7 1137 516 105 0 0 chrX 72455251 72455327 -94194969 + (GAAA)n Simple_repeat Simple_repeat 3 78 0 7 1137 200 291 182 69 chrX 72455938 72456097 -94194199 + L2c LINE L2 3207 3383 -4 7 1137 22 0 0 0 chrX 72456186 72456208 -94194088 + AT_rich Low_complexity Low_complexity 1 22 0 7 1137 291 54 0 0 chrX 72456221 72456258 -94194038 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1137 627 303 0 34 chrX 72456278 72456425 -94193871 - RSINE1 SINE B4 -23 142 1 7 1137 275 277 204 16 chrX 72457716 72457900 -94192396 + L1M3a LINE L1 52 269 -5686 7 1137 1110 72 0 7 chrX 72458720 72458873 -94191423 - L1_Mus4 LINE L1 -7 6629 6478 7 1137 624 132 0 0 chrX 72458981 72459087 -94191209 + (TTTC)n Simple_repeat Simple_repeat 2 107 0 7 1137 2172 96 85 16 chrX 72459641 72459947 -94190349 + ORR1A2 LTR MaLR 1 327 0 7 1137 555 240 23 46 chrX 72460093 72460224 -94190072 + B1_Mur2 SINE Alu 1 128 -21 7 1137 225 0 0 0 chrX 72460228 72460253 -94190043 + (TGGGGG)n Simple_repeat Simple_repeat 3 27 0 7 1137 553 15 0 0 chrX 72460314 72460380 -94189916 + L1_Mus2 LINE L1 6500 6565 -1 7 1137 351 65 0 0 chrX 72460499 72460545 -94189751 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 7 1137 261 95 0 0 chrX 72460692 72460738 -94189558 - B1_Mur4 SINE Alu -2 148 73 7 1137 292 345 45 126 chrX 72460864 72460927 -94189369 + B4 SINE B4 39 156 -136 7 1137 734 174 7 64 chrX 72460927 72460986 -94189310 + B1_Mur1 SINE Alu 17 75 -74 7 1137 941 159 242 0 chrX 72460986 72461168 -94189128 + URR1A DNA MER1_type 1 226 0 7 1137 292 345 45 126 chrX 72461168 72461244 -94189052 + B4 SINE B4 157 221 -71 7 1137 6889 56 12 27 chrX 72461254 72462152 -94188144 + L1_Mus2 LINE L1 5682 6566 0 7 1137 27 29 0 0 chrX 72462157 72462191 -94188105 + AT_rich Low_complexity Low_complexity 1 34 0 7 1137 531 213 32 8 chrX 72462275 72462398 -94187898 + Lx8 LINE L1 5278 5403 -477 7 1137 2457 246 71 56 chrX 72462398 72462583 -94187713 + Lx8 LINE L1 5614 5794 -1679 7 1137 679 232 80 0 chrX 72462583 72462721 -94187575 + B1_Mur2 SINE Alu 1 149 0 7 1137 2457 246 71 56 chrX 72462721 72462844 -94187452 + Lx8 LINE L1 5795 5909 -1564 7 1137 270 0 0 0 chrX 72462844 72462874 -94187422 + (TA)n Simple_repeat Simple_repeat 2 31 0 7 1137 315 0 0 0 chrX 72462874 72462908 -94187388 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1137 2457 246 71 56 chrX 72462908 72463431 -94186865 + Lx8 LINE L1 5910 6458 -1015 7 1137 1619 175 28 96 chrX 72463437 72463791 -94186505 + ORR1B1 LTR MaLR 25 354 -40 7 1137 253 262 46 31 chrX 72463795 72463925 -94186371 + L1VL2 LINE L1 62 193 -6142 7 1137 457 261 22 7 chrX 72463939 72464078 -94186218 + L1_Mus1 LINE L1 675 815 -5801 7 1137 2633 150 3 100 chrX 72464075 72464303 -94185993 + L1_Mus1 LINE L1 725 955 -5661 7 1137 1459 80 5 21 chrX 72464303 72464494 -94185802 + B2_Mm1t SINE B2 2 189 -4 7 1137 27414 108 4 12 chrX 72464494 72470335 -94179961 + L1_Mus1 LINE L1 953 6560 -7 7 1137 375 121 0 11 chrX 72470335 72470408 -94179888 + ORR1A4 LTR MaLR 274 344 -2 7 1137 551 319 21 10 chrX 72470410 72470603 -94179693 + Lx8 LINE L1 6474 6668 -805 7 1137 570 338 87 11 chrX 72470650 72470702 -94179594 + Lx8 LINE L1 6891 6944 -529 7 1137 486 0 0 0 chrX 72470702 72470756 -94179540 + (TATG)n Simple_repeat Simple_repeat 2 55 0 7 1137 570 338 87 11 chrX 72470756 72470990 -94179306 + Lx8 LINE L1 6945 7199 -274 7 1137 2837 156 70 20 chrX 72471013 72471557 -94178739 + Lx9 LINE L1 6460 7030 -614 7 1137 249 122 0 109 chrX 72471568 72471623 -94178673 + B1_Mus1 SINE Alu 11 59 -89 7 1137 383 33 0 109 chrX 72471625 72471726 -94178570 + (CGGGGG)n Simple_repeat Simple_repeat 2 91 0 7 1137 309 141 0 0 chrX 72471726 72471797 -94178499 + (GGGAGA)n Simple_repeat Simple_repeat 4 74 0 7 1137 651 148 0 9 chrX 72471799 72471908 -94178388 + B1_Mur4 SINE Alu 43 150 0 7 1137 2985 69 0 53 chrX 72472008 72472405 -94177891 + L1_Mus2 LINE L1 6187 6562 -4 7 1137 396 239 22 0 chrX 72472424 72472516 -94177780 + L1M3 LINE L1 4712 4805 -1335 7 1137 423 0 0 0 chrX 72472578 72472625 -94177671 + (TC)n Simple_repeat Simple_repeat 1 47 0 7 1137 180 0 0 0 chrX 72472625 72472644 -94177652 + (CA)n Simple_repeat Simple_repeat 1 20 0 7 1137 420 20 0 0 chrX 72472644 72472692 -94177604 + (GA)n Simple_repeat Simple_repeat 2 50 0 7 1137 529 256 8 16 chrX 72472709 72472832 -94177464 + MTEa LTR MaLR 250 371 -8 7 1137 1881 210 20 27 chrX 72472837 72473238 -94177058 - MTC LTR MaLR -8 413 16 7 1137 586 167 10 0 chrX 72473245 72473347 -94176949 - MTC LTR MaLR -318 103 1 7 1137 949 240 34 91 chrX 72473409 72473544 -94176752 + L1M3 LINE L1 4858 4980 -1160 7 1137 825 173 78 21 chrX 72473544 72473686 -94176610 + B1_Mur4 SINE Alu 1 150 0 7 1137 949 240 34 91 chrX 72473686 72473764 -94176532 + L1M3 LINE L1 4981 5054 -1086 7 1137 1525 75 5 0 chrX 72473764 72473950 -94176346 - B2_Mm1t SINE B2 -5 188 2 7 1137 949 240 34 91 chrX 72473950 72474152 -94176144 + L1M3 LINE L1 5055 5250 -890 7 1137 210 184 20 0 chrX 72474384 72474433 -94175863 + T-rich Low_complexity Low_complexity 5 54 0 7 1137 531 281 90 9 chrX 72474447 72474680 -94175616 - L1MA5A LINE L1 -394 5903 5652 7 1137 4427 264 18 12 chrX 72475414 72476478 -94173818 + MERVK26-int LTR ERVK 1445 2514 -4405 7 1137 1036 326 74 54 chrX 72476488 72477120 -94173176 + RMER13A LTR ERVK 2 646 -214 7 1137 2713 243 61 8 chrX 72477249 72478054 -94172242 + MERVK26-int LTR ERVK 2507 3354 -3565 7 1137 635 187 0 22 chrX 72478063 72478200 -94172096 + RMER6A LTR ERVK 325 458 -298 7 1137 235 210 24 47 chrX 72478305 72478390 -94171906 + G-rich Low_complexity Low_complexity 3 85 0 7 1137 297 128 0 0 chrX 72479285 72479332 -94170964 + (GGA)n Simple_repeat Simple_repeat 2 48 0 7 1137 1687 134 17 108 chrX 72481090 72481434 -94168862 + RMER6A LTR ERVK 444 756 0 7 1137 1892 218 5 12 chrX 72481435 72481835 -94168461 + MERVK26-int LTR ERVK 4700 5096 -1823 7 142 18029 92 5 16 chrX 72481836 72485126 -94165170 - L1_Mus1 LINE L1 -1 6566 3290 7 1138 506 237 26 126 chrX 72485129 72485340 -94164956 - L1VL1 LINE L1 -6025 397 48 7 1138 3883 148 52 35 chrX 72485340 72486077 -94164219 + RMER17A LTR ERVK 1 749 -2 7 1138 506 231 29 129 chrX 72486077 72486111 -94164185 - L1VL1 LINE L1 -6183 239 210 7 1138 1144 214 75 4 chrX 72486111 72486350 -94163946 + MERVK26-int LTR ERVK 5090 5345 -1574 7 1138 469 62 161 5 chrX 72486351 72486459 -94163837 - B2_Mm2 SINE B2 -6 189 47 7 1138 3256 53 0 0 chrX 72486491 72486869 -94163427 - L1_Mus1 LINE L1 0 6567 6190 7 1138 1430 64 46 0 chrX 72486876 72487049 -94163247 - B2_Mm2 SINE B2 -14 181 1 7 1138 6999 231 26 22 chrX 72487051 72487601 -94162695 + MERVK26-int LTR ERVK 5334 5886 -1033 7 1138 534 16 0 0 chrX 72487601 72487664 -94162632 + (TA)n Simple_repeat Simple_repeat 2 64 0 7 1138 6999 231 26 22 chrX 72487664 72488118 -94162178 + MERVK26-int LTR ERVK 5887 6352 -567 7 1138 3544 46 2 0 chrX 72488118 72488513 -94161783 + MTA_Mm LTR MaLR 1 396 0 7 1138 6999 231 26 22 chrX 72488513 72489032 -94161264 + MERVK26-int LTR ERVK 6353 6863 -56 7 1138 304 244 98 57 chrX 72489395 72489517 -94160779 + RMER20B LTR ERVK 463 589 -38 7 1138 894 213 174 39 chrX 72489542 72489801 -94160495 + Lx8 LINE L1 6191 6484 -989 7 1138 1063 105 156 13 chrX 72489803 72490007 -94160289 + MTC LTR MaLR 2 208 -213 7 1138 5517 139 15 16 chrX 72490007 72490752 -94159544 + Lx2B LINE L1 6082 6830 -170 7 1138 3621 33 2 0 chrX 72490752 72491146 -94159150 + MTA_Mm LTR MaLR 1 395 -1 7 1138 5517 139 15 16 chrX 72491146 72491292 -94159004 + Lx2B LINE L1 6831 6972 -28 7 1138 1525 103 4 39 chrX 72491320 72491553 -94158743 + MTC LTR MaLR 197 421 0 7 1138 1316 299 55 7 chrX 72491563 72492001 -94158295 + Lx8 LINE L1 6523 6981 -492 7 1138 583 236 158 53 chrX 72491997 72492225 -94158071 + Lx8 LINE L1 7220 7471 -2 7 1138 5010 232 43 19 chrX 72492286 72493463 -94156833 + Lx7 LINE L1 6164 7369 -327 7 1138 549 44 0 0 chrX 72493488 72493556 -94156740 + (TCC)n Simple_repeat Simple_repeat 2 69 0 7 1138 953 187 0 0 chrX 72493558 72493708 -94156588 - B1_Mur4 SINE Alu 0 150 1 7 1138 432 0 0 0 chrX 72493740 72493788 -94156508 + (GA)n Simple_repeat Simple_repeat 1 48 0 8 1138 518 279 48 35 chrX 72493952 72494097 -94156199 - B1_Mur1 SINE Alu 0 149 3 8 1138 3127 79 106 14 chrX 72494097 72494532 -94155764 - MT2C_Mm LTR ERVL 0 475 1 8 1138 2763 43 68 0 chrX 72494997 72495321 -94154975 + ORR1A1 LTR MaLR 1 346 0 8 1138 1641 148 11 0 chrX 72495563 72495833 -94154463 - Lx2 LINE L1 -1 6996 6724 8 1138 5578 130 29 43 chrX 72495836 72496817 -94153479 + Lx2 LINE L1 5748 6714 -283 8 1138 2067 136 45 0 chrX 72497344 72497653 -94152643 + ORR1A3 LTR MaLR 1 323 -3 8 1138 245 178 14 14 chrX 72497806 72497880 -94152416 + MER33 DNA MER1_type 162 235 -89 8 1138 270 330 21 11 chrX 72497881 72497976 -94152320 + B4A SINE B4 2 97 -195 8 1138 1404 236 54 45 chrX 72497976 72498595 -94151701 + Lx7 LINE L1 5517 6151 -1322 8 1138 1171 195 68 14 chrX 72498596 72498899 -94151397 + ORR1C1 LTR MaLR 20 378 0 8 1138 2533 207 69 37 chrX 72498929 72499747 -94150549 + ORR1C1-int LTR MaLR 65 1007 -363 8 1138 2139 12 4 0 chrX 72499747 72499998 -94150298 + MTA_Mm LTR MaLR 1 252 -144 8 1138 1143 35 7 0 chrX 72500000 72500141 -94150155 + MTA_Mm LTR MaLR 255 396 0 1 1138 1761 152 51 21 chrX 72500141 72500172 -94150124 + ORR1B1-int LTR MaLR 1121 1162 -347 2 1138 1950 177 111 0 chrX 72500172 72500551 -94149745 + MTC LTR MaLR 1 421 0 3 1138 1761 152 51 21 chrX 72500551 72500830 -94149466 + ORR1B1-int LTR MaLR 1163 1441 -68 2 1138 1273 262 62 0 chrX 72500831 72501307 -94148989 + Lx6 LINE L1 6139 6886 -574 4 1138 1737 93 105 14 chrX 72501316 72501610 -94148686 - ORR1A4 LTR MaLR -8 321 1 5 1138 2128 245 13 6 chrX 72501615 72502092 -94148204 + Lx6 LINE L1 6955 7434 -26 4 1138 426 125 0 53 chrX 72502094 72502170 -94148126 + ORR1C1-int LTR MaLR 1299 1370 0 6 1138 2068 166 13 58 chrX 72502170 72502566 -94147730 + ORR1C1 LTR MaLR 1 378 0 6 1138 363 73 0 0 chrX 72502584 72502639 -94147657 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 1138 962 266 26 4 chrX 72502664 72502928 -94147368 + Lx8 LINE L1 6203 6472 -1001 8 1138 573 224 73 86 chrX 72502932 72503166 -94147130 - RMER1C Other Other -1 1341 1111 9 1138 2277 309 53 29 chrX 72503168 72504142 -94146154 + Lx8 LINE L1 6476 7473 0 8 1138 253 243 0 14 chrX 72504215 72504286 -94146010 + (CATA)n Simple_repeat Simple_repeat 2 71 0 1 1138 255 225 0 90 chrX 72504302 72504380 -94145916 + MER33 DNA MER1_type 244 314 -10 1 1138 2296 162 13 3 chrX 72504707 72505097 -94145199 - ORR1B1 LTR MaLR 0 394 1 1 1138 376 258 0 0 chrX 72505637 72505703 -94144593 - ID4 SINE ID -7 76 11 1 1138 354 23 0 0 chrX 72505892 72505935 -94144361 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1138 1307 174 29 4 chrX 72505948 72506191 -94144105 - RMER1C Other Other 0 1342 1094 1 1138 959 210 72 0 chrX 72506671 72506866 -94143430 + B3 SINE B2 1 209 -7 1 1138 2286 102 9 3 chrX 72507146 72507471 -94142825 - ORR1A2 LTR MaLR 0 327 1 1 1138 765 261 6 12 chrX 72508171 72508338 -94141958 + B3A SINE B2 1 166 -32 1 1138 387 98 0 0 chrX 72508338 72508399 -94141897 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 1138 234 259 35 47 chrX 72508408 72508493 -94141803 + LTR78 LTR ERV1 1221 1304 0 2 1138 220 292 162 45 chrX 72509451 72509562 -94140734 + L2 LINE L2 2775 2898 -521 2 1138 1162 193 19 5 chrX 72509575 72509783 -94140513 + B3 SINE B2 3 213 -3 2 1138 30 27 0 0 chrX 72510330 72510367 -94139929 + AT_rich Low_complexity Low_complexity 1 37 0 2 1138 1344 84 11 0 chrX 72510504 72510683 -94139613 + B2_Mm2 SINE B2 1 181 -14 2 1138 21 0 0 0 chrX 72511046 72511067 -94139229 + AT_rich Low_complexity Low_complexity 1 21 0 2 1138 977 67 104 0 chrX 72511165 72511299 -94138997 + B1_Mus1 SINE Alu 1 148 0 2 1138 246 32 0 0 chrX 72511304 72511335 -94138961 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1138 21 0 0 0 chrX 72511471 72511492 -94138804 + AT_rich Low_complexity Low_complexity 1 21 0 2 1138 424 274 62 0 chrX 72511503 72511616 -94138680 + PB1D9 SINE Alu 1 120 0 2 1138 475 240 23 60 chrX 72511721 72511854 -94138442 - B1_Mur2 SINE Alu 0 149 22 3 1138 299 267 105 0 chrX 72512341 72512427 -94137869 + RMER30 DNA MER1_type 90 184 -18 3 1138 1280 170 5 5 chrX 72512444 72512663 -94137633 - URR1A DNA MER1_type 0 226 8 3 1138 478 319 53 14 chrX 72513084 72513291 -94137005 + ID_B1 SINE B4 1 215 -9 3 1138 605 26 26 0 chrX 72513291 72513369 -94136927 + (GGAA)n Simple_repeat Simple_repeat 3 82 0 3 1138 311 349 40 0 chrX 72513506 72513632 -94136664 + L2a LINE L2 3284 3414 -12 3 1138 986 136 38 43 chrX 72513639 72513824 -94136472 + B2_Mm2 SINE B2 4 187 -8 3 1138 4308 88 11 23 chrX 72513831 72514449 -94135847 + Lx3A LINE L1 6363 6973 -8 3 1138 21 36 0 0 chrX 72514586 72514614 -94135682 + AT_rich Low_complexity Low_complexity 1 28 0 3 1138 300 264 93 46 chrX 72514668 72514970 -94135326 - L1ME3B LINE L1 -150 6090 5775 3 1138 320 192 0 25 chrX 72514973 72515053 -94135243 + (CATA)n Simple_repeat Simple_repeat 2 79 0 4 1138 490 281 107 29 chrX 72515087 72515395 -94134901 - L1ME3B LINE L1 -459 5714 5383 3 1138 786 252 69 0 chrX 72515481 72515683 -94134613 - B3 SINE B2 0 216 1 4 1138 316 316 9 17 chrX 72518408 72518524 -94131772 - L2 LINE L2 -790 2629 2515 4 1138 895 246 29 5 chrX 72518538 72518742 -94131554 + B3 SINE B2 1 209 -7 4 1138 219 353 9 122 chrX 72518746 72518848 -94131448 - L2 LINE L2 -1617 1802 1702 4 1138 1327 103 113 0 chrX 72518848 72519051 -94131245 + URR1A DNA MER1_type 1 226 0 4 1138 1615 21 21 0 chrX 72519055 72519243 -94131053 + B2_Mm1t SINE B2 2 193 0 4 1138 219 353 9 122 chrX 72519243 72519348 -94130948 - L2 LINE L2 -1718 1701 1614 4 1138 207 288 196 8 chrX 72519461 72519594 -94130702 + L2b LINE L2 2967 3124 -251 4 1138 894 264 0 57 chrX 72519706 72519915 -94130381 - B4 SINE B4 -2 290 94 4 1138 868 136 66 28 chrX 72519919 72520100 -94130196 - B2_Mm2 SINE B2 -6 189 2 4 1138 486 310 62 115 chrX 72520125 72520333 -94129963 - B3A SINE B2 0 198 2 4 1138 197 284 42 56 chrX 72520390 72520461 -94129835 + L2b LINE L2 3351 3420 -6 4 1138 859 188 5 15 chrX 72520860 72521055 -94129241 + L1_Mur2 LINE L1 888 1080 -6006 5 1138 1306 91 5 11 chrX 72521055 72521212 -94129084 + B2_Mm1t SINE B2 2 158 -35 5 1138 198 0 0 0 chrX 72521212 72521234 -94129062 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 5 1138 1306 91 5 11 chrX 72521234 72521264 -94129032 + B2_Mm1t SINE B2 159 188 -5 5 1138 1256 122 68 0 chrX 72521264 72521642 -94128654 + L1_Mur2 LINE L1 1070 1491 -4386 5 1138 1858 150 79 4 chrX 72521659 72522116 -94128180 + L1VL2 LINE L1 116 569 -5766 5 1138 5354 107 47 109 chrX 72522116 72522886 -94127410 + L1VL2 LINE L1 9 824 -5511 5 1138 1036 95 0 0 chrX 72522886 72523023 -94127273 + B1_Mus1 SINE Alu 5 141 -7 5 1138 12652 103 45 96 chrX 72523023 72523235 -94127061 + L1VL2 LINE L1 825 933 -5402 5 1138 1473 50 28 0 chrX 72523235 72523417 -94126879 - B2_Mm1t SINE B2 -6 187 1 5 1138 12652 83 32 17 chrX 72523417 72525435 -94124861 + L1VL2 LINE L1 934 2983 -632 5 1138 3787 53 0 0 chrX 72525615 72526108 -94124188 + L1Md_F2 LINE L1 5094 5586 -297 5 1138 8070 50 1 0 chrX 72526108 72527100 -94123196 + L1Md_F2 LINE L1 5587 6579 -3 5 1138 21 0 0 0 chrX 72527107 72527128 -94123168 + AT_rich Low_complexity Low_complexity 1 21 0 5 1138 2422 183 7 20 chrX 72527554 72528096 -94122200 + L1_Mur2 LINE L1 1485 2019 -3858 5 1138 2396 190 12 52 chrX 72528099 72528616 -94121680 + RMER13B LTR ERVK 1 496 -412 6 1138 669 236 35 24 chrX 72528601 72528770 -94121526 + RMER13B LTR ERVK 734 904 -4 6 1138 234 0 0 0 chrX 72528805 72528831 -94121465 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1138 1774 125 0 0 chrX 72528832 72529120 -94121176 + L1_Mur2 LINE L1 2058 2345 -3532 5 1138 6279 159 61 32 chrX 72529114 72530679 -94119617 + Lx5 LINE L1 5424 7050 0 6 1138 517 314 8 17 chrX 72533975 72534095 -94116201 + RSINE1 SINE B4 46 164 -1 6 1138 2551 27 34 59 chrX 72534095 72534281 -94116015 + ORR1A0 LTR MaLR 1 186 -160 6 1138 3620 47 0 7 chrX 72534281 72534733 -94115563 + L1Md_F2 LINE L1 6134 6582 0 6 1138 2551 27 34 59 chrX 72534733 72534901 -94115395 + ORR1A0 LTR MaLR 187 346 0 6 1138 464 335 127 80 chrX 72535164 72535440 -94114856 - B4 SINE B4 -1 291 3 6 1138 2121 110 3 51 chrX 72535515 72535851 -94114445 - ORR1A4 LTR MaLR -8 321 2 6 1138 4386 163 52 80 chrX 72535869 72536784 -94113512 + RMER19B LTR ERVK 1 890 -12 6 1138 6871 193 41 126 chrX 72536796 72538003 -94112293 - ORR1A4-int LTR MaLR -11 1781 643 6 1138 639 26 0 0 chrX 72538003 72538080 -94112216 + (TC)n Simple_repeat Simple_repeat 1 77 0 6 1138 6871 193 41 126 chrX 72538080 72538820 -94111476 - ORR1A4-int LTR MaLR -1150 642 1 6 1138 2071 119 6 58 chrX 72538820 72539167 -94111129 - ORR1A4 LTR MaLR 0 329 1 6 1138 648 198 0 0 chrX 72539172 72539278 -94111018 - B1_Mur4 SINE Alu -43 107 2 7 1138 335 241 181 3 chrX 72539446 72539555 -94110741 - B1_Mus2 SINE Alu -8 141 5 7 1138 252 316 19 75 chrX 72539606 72539712 -94110584 + PB1D9 SINE Alu 15 114 -6 7 1138 312 149 0 0 chrX 72539674 72539721 -94110575 + B4A SINE B4 184 230 -62 7 1138 396 0 0 0 chrX 72539830 72539874 -94110422 + (GA)n Simple_repeat Simple_repeat 1 44 0 7 1138 2135 97 9 62 chrX 72539965 72540305 -94109991 + ORR1A4 LTR MaLR 6 327 -2 7 1138 631 124 8 16 chrX 72540310 72540433 -94109863 + (CATATA)n Simple_repeat Simple_repeat 5 126 0 7 1138 254 197 66 0 chrX 72540581 72540642 -94109654 + (TCTG)n Simple_repeat Simple_repeat 1 65 0 7 1138 315 319 0 0 chrX 72540958 72541030 -94109266 - ID4_ SINE ID 0 83 12 7 1138 199 309 71 0 chrX 72541037 72541121 -94109175 + L2a LINE L2 3337 3426 0 7 1138 6081 136 101 7 chrX 72541866 72543109 -94107187 + L1_Mur1 LINE L1 9 1383 -4503 8 1138 594 210 59 0 chrX 72543109 72543228 -94107068 - RMER17B LTR ERVK -818 140 15 8 1138 1915 190 98 7 chrX 72543223 72543642 -94106654 + RMER17B LTR ERVK 490 946 -12 8 1138 15523 80 30 7 chrX 72543648 72546106 -94104190 + L1_Mur1 LINE L1 1385 3901 -1985 8 1138 5485 74 37 4 chrX 72546108 72546590 -94103706 + RLTR22_Mus LTR ERVK 3 495 -1313 8 1138 297 0 0 0 chrX 72546590 72546623 -94103673 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 8 1138 5485 74 37 4 chrX 72546623 72546917 -94103379 + RLTR22_Mus LTR ERVK 496 804 -1004 8 1138 380 299 67 72 chrX 72547180 72547403 -94102893 + RMER12 LTR ERVK 1101 1322 0 8 1138 2894 80 27 5 chrX 72547403 72547842 -94102454 + L1_Mur1 LINE L1 3896 4344 -1542 8 1138 745 196 81 19 chrX 72547843 72548004 -94102292 - RLTR16 LTR ERVK -334 171 1 8 1138 296 162 152 0 chrX 72548067 72548172 -94102124 - MYSERV16_I-int LTR ERVK -21 2305 2185 8 1138 33876 35 1 0 chrX 72548219 72554477 -94095819 + L1Md_T LINE L1 1 5589 -297 8 1138 8899 7 0 11 chrX 72554477 72555484 -94094812 + L1Md_T LINE L1 5590 6585 0 8 1138 826 163 28 6 chrX 72555497 72555676 -94094620 - MYSERV16_I-int LTR ERVK -173 2153 1971 8 1138 389 61 0 0 chrX 72555683 72555732 -94094564 + ORR1A2-int LTR MaLR 1915 1963 0 9 1138 1945 116 22 109 chrX 72555732 72556090 -94094206 + ORR1A2 LTR MaLR 1 327 0 9 1138 7663 146 19 63 chrX 72556209 72557872 -94092424 + L1_Mur3 LINE L1 3965 5572 -308 9 1138 188 200 18 0 chrX 72557872 72557927 -94092369 + CT-rich Low_complexity Low_complexity 1 56 0 9 1138 581 309 16 58 chrX 72557985 72558174 -94092122 - B3A SINE B2 -14 184 4 9 1138 757 299 76 42 chrX 72558174 72558250 -94092046 + MTD LTR MaLR 14 98 -321 9 1138 1285 189 222 147 chrX 72558250 72558746 -94091550 + MT2A LTR ERVL 1 533 0 9 1138 757 299 76 42 chrX 72558746 72558927 -94091369 + MTD LTR MaLR 99 280 -139 9 1138 1484 210 152 88 chrX 72558929 72559453 -94090843 + MT2B LTR ERVL 1 565 -36 9 1138 279 0 0 0 chrX 72559453 72559484 -94090812 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 9 1138 1484 210 152 88 chrX 72559484 72559524 -94090772 + MT2B LTR ERVL 566 601 0 9 1138 1366 76 5 0 chrX 72560262 72560446 -94089850 + B2_Mm1a SINE B2 2 186 -7 9 1138 3006 79 8 5 chrX 72560574 72560969 -94089327 + MTA_Mm LTR MaLR 1 396 0 9 1138 1014 272 69 38 chrX 72561082 72561363 -94088933 + MLT1B LTR MaLR 3 298 -92 1 1138 1226 34 0 13 chrX 72561363 72561512 -94088784 - B1_Mus1 SINE Alu -1 147 1 1 1138 1014 318 71 76 chrX 72561512 72561592 -94088704 + MLT1B LTR MaLR 284 352 -22 1 1138 7540 82 16 11 chrX 72562541 72562632 -94087664 - L1_Mus3 LINE L1 0 6638 6543 1 1138 315 0 0 0 chrX 72562632 72562667 -94087629 + (TCCC)n Simple_repeat Simple_repeat 2 36 0 1 1138 7540 100 15 7 chrX 72562667 72564076 -94086220 - L1_Mus3 LINE L1 -96 6542 5123 1 1138 1931 78 4 7 chrX 72564090 72564363 -94085933 - L1_Mus2 LINE L1 0 6566 6295 1 1138 2880 96 30 0 chrX 72564366 72564763 -94085533 + L1_Mm LINE L1 5475 5883 0 1 1138 11275 122 3 7 chrX 72564770 72566533 -94083763 - L1_Mus3 LINE L1 -745 5138 3382 1 1138 429 285 87 7 chrX 72567075 72567213 -94083083 - B1F SINE Alu 0 149 1 1 1138 263 322 63 95 chrX 72567213 72567300 -94082996 - MT2B LTR ERVL -440 161 81 1 1138 291 125 83 0 chrX 72567309 72567357 -94082939 + ID SINE ID 9 60 -164 1 1138 790 231 13 0 chrX 72567785 72567941 -94082355 + ID_B1 SINE B4 63 220 -4 1 1138 2862 62 23 13 chrX 72568538 72568932 -94081364 - L1Md_F2 LINE L1 0 6582 6185 1 1138 654 289 68 42 chrX 72568942 72569319 -94080977 + MER57C2 LTR ERV1 8 411 0 1 1138 1450 65 16 0 chrX 72569456 72569641 -94080655 + B2_Mm2 SINE B2 3 190 -5 1 1138 274 264 45 98 chrX 72569686 72569930 -94080366 - RLTR15 LTR ERVK -18 341 111 1 1138 367 179 99 33 chrX 72569966 72570087 -94080209 - RLTR15 LTR ERVK -228 131 3 1 1138 31313 79 19 10 chrX 72570297 72574792 -94075504 + Lx2B LINE L1 1343 5877 -9 1 1138 4171 84 18 18 chrX 72574792 72575395 -94074901 + Lx3_Mus LINE L1 6396 6998 -11 1 1138 1842 165 11 31 chrX 72575395 72575463 -94074833 + Lx2B LINE L1 5876 5936 -1064 1 1138 207 167 0 0 chrX 72575628 72575670 -94074626 + A-rich Low_complexity Low_complexity 1 42 0 1 1138 193 371 64 8 chrX 72576087 72576212 -94074084 - L2 LINE L2 -2652 767 636 1 1138 635 246 22 0 chrX 72576558 72576696 -94073600 - B3 SINE B2 0 216 76 1 1138 810 278 16 10 chrX 72577135 72577328 -94072968 + RMER1A Other Other 73 266 -764 1 1138 408 20 0 0 chrX 72577328 72577377 -94072919 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1138 228 299 20 49 chrX 72577611 72577713 -94072583 + MTEb LTR MaLR 281 379 0 1 1138 429 241 9 27 chrX 72578545 72578656 -94071640 + MLT1A1 LTR MaLR 300 408 0 1 1138 1600 142 97 13 chrX 72580592 72580891 -94069405 - RMER5 LTR ERV1 -47 487 164 1 1138 543 31 0 0 chrX 72580921 72580986 -94069310 + (GAAA)n Simple_repeat Simple_repeat 2 66 0 1 1138 1654 86 12 4 chrX 72581034 72581279 -94069017 + L1_Mur1 LINE L1 2279 2525 -3361 1 1138 1849 157 27 90 chrX 72581278 72581371 -94068925 + L1_Mur1 LINE L1 4787 4871 -1015 1 1138 1205 64 0 0 chrX 72581371 72581528 -94068768 + L1_Mus1 LINE L1 6411 6567 0 1 1138 1849 157 27 90 chrX 72581528 72581847 -94068449 + L1_Mur1 LINE L1 4872 5173 -713 1 1138 7789 160 47 2 chrX 72581843 72583220 -94067076 - L1_Mur2 LINE L1 -78 5799 4362 1 1138 976 96 0 7 chrX 72583216 72583363 -94066933 - L1_Mur2 LINE L1 -513 5364 5219 1 1138 291 272 78 71 chrX 72583824 72584105 -94066191 - Charlie10 DNA MER1_type -50 2772 2490 1 1138 230 280 37 9 chrX 72584463 72584571 -94065725 - L1MD LINE L1 -1037 5109 4999 1 1138 620 229 0 40 chrX 72584909 72585082 -94065214 + Lx5 LINE L1 867 1032 -6054 1 1138 396 0 0 0 chrX 72585099 72585143 -94065153 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1138 1227 118 20 0 chrX 72585149 72585344 -94064952 + Lx5 LINE L1 2061 2259 -3618 1 1138 1731 131 8 0 chrX 72585341 72585608 -94064688 + Lx5 LINE L1 3503 3771 -2106 1 1138 823 117 8 0 chrX 72585586 72585714 -94064582 + L1_Mur2 LINE L1 4483 4611 -1266 1 1138 6384 162 3 34 chrX 72585710 72586940 -94063356 + Lx5 LINE L1 4158 5349 -528 1 1138 5519 121 28 21 chrX 72586940 72587833 -94062463 + Lx3B LINE L1 6072 6970 -3 1 1138 7150 177 22 1 chrX 72587852 72589128 -94061168 + Lx5 LINE L1 5693 7050 0 1 1138 486 240 102 11 chrX 72589141 72589318 -94060978 - L1MD LINE L1 -1151 4995 4803 1 1138 346 292 67 27 chrX 72589446 72589671 -94060625 - L1MD LINE L1 -1388 4758 4525 1 1138 1583 208 108 16 chrX 72589685 72590056 -94060240 - MTD LTR MaLR -14 405 1 1 1138 249 247 68 58 chrX 72590149 72590325 -94059971 - L1MD LINE L1 -1768 4378 4206 1 1138 582 262 42 21 chrX 72590491 72590648 -94059648 - ID_B1 SINE B4 -4 220 64 1 1138 22373 91 8 6 chrX 72590691 72594474 -94055822 + L1Md_A LINE L1 492 4276 -1607 1 1138 20284 81 1 8 chrX 72594476 72597904 -94052392 - L1Md_Gf LINE L1 -1889 3997 610 1 1138 433 276 234 4 chrX 72597904 72598177 -94052119 - L1MEf LINE L1 -3994 2206 1871 1 1138 405 0 0 0 chrX 72598251 72598296 -94052000 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1138 32 0 0 0 chrX 72598836 72598868 -94051428 + AT_rich Low_complexity Low_complexity 1 32 0 1 1138 3324 169 37 101 chrX 72599640 72600405 -94049891 - RMER6D LTR ERVK -4 716 1 1 1138 4504 42 0 0 chrX 72600420 72600966 -94049330 - L1Md_F3 LINE L1 0 6584 6039 1 1138 2915 155 44 4 chrX 72600966 72601466 -94048830 - ORR1A4-int LTR MaLR -1443 520 1 1 1138 601 162 10 0 chrX 72601466 72601565 -94048731 - ORR1A4 LTR MaLR 0 329 230 1 1138 24 0 0 0 chrX 72601597 72601621 -94048675 + AT_rich Low_complexity Low_complexity 1 24 0 1 1138 2182 143 41 5 chrX 72601621 72602014 -94048282 + RLTR19-int LTR ERVK 849 1255 -4882 1 1138 1155 155 0 0 chrX 72602030 72602217 -94048079 + B2_Mm2 SINE B2 8 194 -1 1 1138 2107 74 7 0 chrX 72602217 72602527 -94047769 + L1_Mur1 LINE L1 1260 1571 -4315 1 1138 10936 13 0 1 chrX 72602527 72603779 -94046517 + L1Md_A LINE L1 4336 5586 -297 1 1138 8899 9 0 0 chrX 72603779 72604775 -94045521 + L1Md_A LINE L1 5587 6582 0 1 1138 26 0 0 0 chrX 72604775 72604801 -94045495 + AT_rich Low_complexity Low_complexity 1 26 0 1 1138 2953 26 0 0 chrX 72604801 72605145 -94045151 + L1Md_A LINE L1 5243 5586 -297 1 1138 8956 6 0 0 chrX 72605145 72606141 -94044155 + L1Md_A LINE L1 5587 6582 0 1 1138 26 0 0 0 chrX 72606141 72606167 -94044129 + AT_rich Low_complexity Low_complexity 1 26 0 1 1138 2953 26 0 0 chrX 72606167 72606511 -94043785 + L1Md_A LINE L1 5243 5586 -297 1 1138 8454 30 0 0 chrX 72606511 72607506 -94042790 + L1Md_A LINE L1 5587 6581 -1 1 1138 479 17 17 0 chrX 72607557 72607617 -94042679 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 1138 21 0 0 0 chrX 72608075 72608096 -94042200 + AT_rich Low_complexity Low_complexity 1 21 0 1 1138 3689 82 28 12 chrX 72608097 72608476 -94041820 + L1_Mur1 LINE L1 1553 1926 -3960 1 1138 507 17 0 0 chrX 72608476 72608536 -94041760 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 1 1138 3689 82 28 12 chrX 72608536 72608725 -94041571 + L1_Mur1 LINE L1 1927 2128 -3758 1 1138 222 37 0 0 chrX 72608860 72608887 -94041409 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 1 1138 1111 110 6 0 chrX 72608888 72609051 -94041245 - B2_Mm1t SINE B2 -28 165 2 1 1138 967 94 130 12 chrX 72609803 72609964 -94040332 - B2_Mm2 SINE B2 -14 181 2 1 1138 414 233 144 0 chrX 72609976 72610066 -94040230 - PB1D7 SINE Alu -5 115 13 1 1138 303 364 80 62 chrX 72609990 72610166 -94040130 - ID_B1 SINE B4 -45 179 1 1 1138 227 196 34 51 chrX 72611067 72611126 -94039170 - MTE2a LTR MaLR -50 329 272 1 1138 1660 123 7 15 chrX 72611556 72611829 -94038467 + L1Md_F2 LINE L1 6310 6580 -2 1 1138 1043 22 0 22 chrX 72612795 72612934 -94037362 - L1Md_F2 LINE L1 -14 6568 6433 1 1138 360 284 0 0 chrX 72612964 72613038 -94037258 + ID4 SINE ID 10 83 0 1 1138 188 309 180 12 chrX 72613077 72613244 -94037052 - L2 LINE L2 -986 2433 2239 1 1139 2561 167 64 14 chrX 72613997 72614500 -94035796 - RLTR12B LTR ERVK 0 528 1 1 1139 828 224 81 16 chrX 72614637 72614823 -94035473 + B3 SINE B2 2 199 -17 1 1139 195 42 0 0 chrX 72614824 72614848 -94035448 + (TAAAA)n Simple_repeat Simple_repeat 5 28 0 1 1139 912 135 14 0 chrX 72615261 72615402 -94034894 + B1_Mus1 SINE Alu 6 148 0 1 1139 256 322 62 48 chrX 72615979 72616188 -94034108 + MERVL-int LTR ERVL 3680 3891 -1866 1 1139 1173 55 7 0 chrX 72616202 72616348 -94033948 + B1_Mm SINE Alu 1 147 0 1 1139 366 371 20 8 chrX 72616577 72616827 -94033469 + MERVL-int LTR ERVL 4183 4435 -1050 1 1139 579 288 29 7 chrX 72617648 72617788 -94032508 + B1F2 SINE Alu 7 149 0 1 1139 732 250 21 59 chrX 72618689 72618876 -94031420 - B3A SINE B2 -11 187 8 1 1139 704 261 197 5 chrX 72618881 72619074 -94031222 - B4A SINE B4 -62 230 1 1 1139 501 17 0 0 chrX 72619138 72619196 -94031100 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1139 3090 162 131 25 chrX 72619209 72619841 -94030455 - MTC-int LTR MaLR -559 699 1 1 1139 1483 184 4 8 chrX 72619837 72620089 -94030207 - MTC LTR MaLR 0 421 171 1 1139 1784 201 162 0 chrX 72620090 72620522 -94029774 + Lx9 LINE L1 7129 7630 -14 1 1139 1538 239 48 39 chrX 72620547 72620568 -94029728 + Lx9 LINE L1 5234 5250 -597 1 1139 1121 111 55 16 chrX 72620568 72620751 -94029545 + B2_Mm2 SINE B2 2 191 -4 1 1139 1538 239 48 39 chrX 72620751 72620922 -94029374 + Lx9 LINE L1 5251 5428 -419 1 1139 231 36 0 0 chrX 72620922 72620950 -94029346 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1 1139 1538 239 48 39 chrX 72620950 72621240 -94029056 + Lx9 LINE L1 5429 5721 -126 1 1139 3296 121 9 17 chrX 72621240 72621768 -94028528 - RLTR28 LTR ERVL 0 524 1 1 1139 475 253 156 31 chrX 72621777 72621969 -94028327 + Lx9 LINE L1 5761 5976 -1668 1 1139 2197 310 47 9 chrX 72622048 72622810 -94027486 + Lx8 LINE L1 6299 7089 -384 1 1139 714 231 0 20 chrX 72622927 72623076 -94027220 + ID_B1 SINE B4 83 224 0 1 1139 308 333 128 41 chrX 72623455 72623774 -94026522 + L1M5 LINE L1 4914 5260 -886 1 1139 481 283 39 38 chrX 72624035 72624076 -94026220 + B4 SINE B4 45 164 -60 1 1139 637 229 8 0 chrX 72624076 72624198 -94026098 + B1_Mur1 SINE Alu 1 123 -26 1 1139 481 283 39 38 chrX 72624198 72624216 -94026080 + B4 SINE B4 165 223 -1 1 1139 183 100 0 0 chrX 72624583 72624613 -94025683 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1139 24 67 0 0 chrX 72624626 72624671 -94025625 + AT_rich Low_complexity Low_complexity 1 45 0 1 1139 1352 226 39 55 chrX 72625534 72625843 -94024453 + MTD LTR MaLR 116 419 0 1 1139 3543 260 82 38 chrX 72625850 72627186 -94023110 + Lx8 LINE L1 5587 6962 -511 1 1139 372 233 107 0 chrX 72627186 72627289 -94023007 + B3 SINE B2 103 216 0 1 1139 23 0 0 0 chrX 72627450 72627473 -94022823 + AT_rich Low_complexity Low_complexity 1 23 0 1 1139 22 0 0 0 chrX 72627747 72627769 -94022527 + GC_rich Low_complexity Low_complexity 1 22 0 1 1139 220 200 0 0 chrX 72628241 72628281 -94022015 + T-rich Low_complexity Low_complexity 3 42 0 1 1139 335 214 31 20 chrX 72628519 72628610 -94021686 - PB1D7 SINE Alu -58 91 1 1 1139 396 0 0 0 chrX 72628815 72628859 -94021437 + (TC)n Simple_repeat Simple_repeat 2 45 0 1 1139 819 89 154 0 chrX 72628860 72628983 -94021313 - B1_Mus1 SINE Alu -6 142 1 1 1139 3823 61 22 4 chrX 72628994 72629503 -94020793 - L1_Mus4 LINE L1 -1 6635 6118 2 1139 555 207 149 0 chrX 72629550 72629671 -94020625 + B1_Mur4 SINE Alu 1 139 -11 2 1139 239 82 0 58 chrX 72629762 72629814 -94020482 + (T)n Simple_repeat Simple_repeat 1 49 0 2 1139 508 331 57 76 chrX 72629842 72630132 -94020164 + MLT1G1 LTR MaLR 29 283 -272 2 1139 24 0 0 0 chrX 72630132 72630156 -94020140 + AT_rich Low_complexity Low_complexity 1 24 0 2 1139 320 301 100 41 chrX 72630161 72630331 -94019965 + MLT1G1 LTR MaLR 412 591 0 2 1139 1050 154 124 0 chrX 72630380 72630581 -94019715 - URR1A DNA MER1_type 0 226 1 2 1139 256 304 57 14 chrX 72630772 72630912 -94019384 - L1MEg LINE L1 -4434 1650 1505 2 1139 210 37 0 0 chrX 72631039 72631066 -94019230 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 2 1139 1275 68 0 0 chrX 72631069 72631230 -94019066 - B2_Mm2 SINE B2 -34 161 1 2 1139 1108 55 0 65 chrX 72631451 72631606 -94018690 - B1_Mus1 SINE Alu -1 147 3 2 1139 220 238 172 47 chrX 72631645 72631773 -94018523 + MIR SINE MIR 119 262 0 2 1139 307 229 0 0 chrX 72632291 72632352 -94017944 - RMER15 LTR ERVL -105 470 410 2 1139 270 237 77 26 chrX 72633146 72633224 -94017072 + RMER10A LTR ERVL 318 399 -43 2 1139 340 268 119 44 chrX 72633259 72633419 -94016877 - MIRb SINE MIR -39 229 58 2 1139 609 309 107 55 chrX 72633694 72633779 -94016517 - L1ME3B LINE L1 -284 5956 5880 2 1139 878 189 14 0 chrX 72633779 72633927 -94016369 - B1_Mur4 SINE Alu 0 150 1 2 1139 609 311 110 54 chrX 72633927 72634485 -94015811 - L1ME3B LINE L1 -294 5879 5274 2 1139 197 65 32 0 chrX 72634487 72634518 -94015778 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1139 201 39 0 0 chrX 72634520 72634546 -94015750 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 2 1139 480 192 184 0 chrX 72634569 72634694 -94015602 + RLTR28B LTR ERVL 1 148 -333 2 1139 271 174 70 28 chrX 72634731 72634802 -94015494 - RLTR28B LTR ERVL -407 74 1 2 1139 1014 90 0 0 chrX 72634857 72635001 -94015295 + URR1B DNA MER1_type 82 225 0 2 1139 316 309 179 29 chrX 72635001 72635141 -94015155 - MER77 LTR ERVL -41 566 406 2 1139 305 301 132 0 chrX 72635199 72635282 -94015014 - B4A SINE B4 -198 94 1 2 1139 450 214 215 33 chrX 72635378 72635499 -94014797 - B1_Mur2 SINE Alu -6 143 1 2 1139 539 202 11 0 chrX 72636386 72636475 -94013821 - B3 SINE B2 -123 93 4 2 1139 429 253 103 0 chrX 72637292 72637379 -94012917 - PB1D10 SINE Alu -11 106 11 2 1139 23 33 0 0 chrX 72637400 72637430 -94012866 + AT_rich Low_complexity Low_complexity 1 30 0 2 1139 526 276 29 47 chrX 72637437 72637525 -94012771 - B3 SINE B2 -2 214 129 2 1139 1237 119 16 0 chrX 72637525 72637710 -94012586 + B2_Mm2 SINE B2 1 188 -7 2 1139 526 276 29 47 chrX 72637710 72637792 -94012504 - B3 SINE B2 -88 128 47 2 1139 432 325 33 0 chrX 72638040 72638160 -94012136 - MER58B DNA MER1_type -4 337 214 2 1139 770 243 69 22 chrX 72638311 72638542 -94011754 - MTE2a LTR MaLR 0 379 138 2 1139 391 275 126 6 chrX 72638566 72638735 -94011561 - MTE2a LTR MaLR -159 260 62 2 1139 505 268 35 45 chrX 72638711 72638741 -94011555 + CYRA11_Mm Unknown Y-chromosome 141 337 -280 2 1139 1089 120 0 12 chrX 72638741 72638910 -94011386 - URR1B DNA MER1_type 0 225 59 2 1139 227 250 30 30 chrX 72638936 72639002 -94011294 - MTE2a LTR MaLR -355 66 1 2 1139 614 290 107 11 chrX 72639142 72639404 -94010892 + B4A SINE B4 2 288 -4 2 1139 811 157 88 29 chrX 72640322 72640493 -94009803 - B2_Mm2 SINE B2 -14 181 1 2 1139 258 337 82 33 chrX 72641599 72641783 -94008513 + HERVL40-int LTR ERVL 5076 5268 -262 2 1139 417 234 0 0 chrX 72641977 72642054 -94008242 + ID4 SINE ID 5 81 -2 2 1139 2161 139 34 14 chrX 72642194 72642552 -94007744 + ORR1B2 LTR MaLR 3 367 0 2 1139 275 358 66 24 chrX 72643935 72644101 -94006195 - MER5B DNA MER1_type -5 173 1 2 1139 1186 42 0 7 chrX 72644185 72644330 -94005966 - B1_Mus2 SINE Alu 0 147 4 2 1139 25 0 0 0 chrX 72644604 72644629 -94005667 + AT_rich Low_complexity Low_complexity 1 25 0 2 1139 210 71 0 0 chrX 72644885 72644913 -94005383 + (CAAAG)n Simple_repeat Simple_repeat 2 29 0 2 1139 207 0 0 0 chrX 72646586 72646609 -94003687 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1139 1098 75 0 0 chrX 72646609 72646746 -94003550 - B1_Mus1 SINE Alu -9 139 3 2 1139 595 211 291 6 chrX 72646777 72646949 -94003347 - ID_B1 SINE B4 -3 221 1 2 1139 1811 172 38 64 chrX 72647214 72647605 -94002691 + RMER10B LTR ERVL 18 398 0 2 1139 2489 142 196 2 chrX 72647605 72648064 -94002232 + RMER15 LTR ERVL 28 575 0 2 1139 678 239 137 22 chrX 72648533 72648760 -94001536 + RMER21B LTR ERV1 315 567 -275 2 1139 870 199 156 0 chrX 72649708 72649894 -94000402 + B3 SINE B2 2 216 0 2 1139 30 0 0 0 chrX 72650789 72650819 -93999477 + AT_rich Low_complexity Low_complexity 1 30 0 2 1139 1065 92 7 0 chrX 72650823 72650964 -93999332 - B1_Mus1 SINE Alu -6 142 1 2 1139 410 273 45 0 chrX 72651498 72651608 -93998688 - L1M2 LINE L1 -3417 2726 2612 2 1139 458 234 82 31 chrX 72651619 72651875 -93998421 + L1M2 LINE L1 3013 3281 -2859 2 1139 464 311 29 15 chrX 72651881 72652018 -93998278 + B1F1 SINE Alu 3 141 -8 2 1139 259 224 152 17 chrX 72652040 72652099 -93998197 + tRNA-Ala-GCY_ tRNA tRNA 1 67 -8 2 1139 226 174 0 21 chrX 72652099 72652146 -93998150 + (CAA)n Simple_repeat Simple_repeat 2 47 0 2 1139 277 255 120 62 chrX 72652146 72652355 -93997941 + L1M2 LINE L1 3307 3527 -2616 2 1139 229 362 0 0 chrX 72652360 72652418 -93997878 - ID4_ SINE ID -5 78 21 2 1139 216 0 0 0 chrX 72652428 72652452 -93997844 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1139 1257 200 0 0 chrX 72652521 72652726 -93997570 + B3 SINE B2 2 206 -10 2 1139 1017 250 106 26 chrX 72652846 72653224 -93997072 + L1M2 LINE L1 3799 4206 -1937 2 1139 847 118 0 0 chrX 72653242 72653369 -93996927 + B2_Mm2 SINE B2 25 151 -44 2 1139 378 0 0 0 chrX 72653369 72653411 -93996885 + (TAA)n Simple_repeat Simple_repeat 3 44 0 2 1139 342 204 75 0 chrX 72653414 72653507 -93996789 + L1M2 LINE L1 4220 4319 -1821 2 1139 1016 116 0 0 chrX 72653510 72653657 -93996639 + B1_Mus2 SINE Alu 1 147 0 2 1139 243 23 68 0 chrX 72653665 72653709 -93996587 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 1139 422 222 122 35 chrX 72653741 72653970 -93996326 + L1M2 LINE L1 4310 4558 -1582 2 1139 319 234 26 0 chrX 72654036 72654113 -93996183 + L1M2 LINE L1 4791 4869 -1274 2 1139 324 0 0 0 chrX 72654220 72654256 -93996040 + (TATG)n Simple_repeat Simple_repeat 2 37 0 2 1139 282 297 0 0 chrX 72654261 72654335 -93995961 - PB1D7 SINE Alu -7 113 40 2 1139 253 318 0 0 chrX 72654347 72654413 -93995883 - ID4 SINE ID -17 66 1 2 1139 403 312 126 31 chrX 72654449 72654608 -93995688 - MER5B DNA MER1_type 0 178 5 2 1139 22 0 0 0 chrX 72654851 72654873 -93995423 + AT_rich Low_complexity Low_complexity 1 22 0 2 1139 362 340 48 43 chrX 72655234 72655443 -93994853 + MIRb SINE MIR 58 267 -1 2 1139 572 271 8 0 chrX 72655453 72655575 -93994721 - PB1 SINE Alu -2 125 3 2 1139 374 316 86 97 chrX 72655997 72656428 -93993868 + AmnSINE1 SINE SINE 78 503 -72 2 1139 500 0 17 0 chrX 72657424 72657484 -93992812 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 1139 349 234 127 45 chrX 72658073 72658207 -93992089 + B1F SINE Alu 5 149 0 2 1139 329 136 15 0 chrX 72658227 72658293 -93992003 + GA-rich Low_complexity Low_complexity 2 68 0 2 1139 225 65 0 0 chrX 72658753 72658784 -93991512 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1139 349 226 224 8 chrX 72659335 72659469 -93990827 - MER103 DNA DNA -2 164 2 2 1139 226 162 0 0 chrX 72659438 72659475 -93990821 - Charlie14a DNA MER1_type -1 1163 1127 2 1139 263 319 66 25 chrX 72659974 72660096 -93990200 + MIR SINE MIR 15 141 -121 2 1139 571 251 18 57 chrX 72660128 72660326 -93989970 - MIR SINE MIR -27 241 43 2 1139 25 31 0 0 chrX 72661095 72661127 -93989169 + AT_rich Low_complexity Low_complexity 1 32 0 2 1139 921 25 0 32 chrX 72662279 72662404 -93987892 - B1_Mus2 SINE Alu 0 147 27 2 1139 527 375 73 60 chrX 72664219 72664766 -93985530 - MLT2B3 LTR ERVL 0 554 1 2 1139 299 240 74 35 chrX 72664928 72665157 -93985139 - L1MEg LINE L1 -4099 1985 1748 2 1139 254 308 33 0 chrX 72665178 72665269 -93985027 - Tigger5 DNA MER2_type -16 2390 2297 2 1139 357 326 10 0 chrX 72665270 72665368 -93984928 - Tigger5 DNA MER2_type -2300 106 8 2 1139 498 252 190 9 chrX 72665505 72665853 -93984443 - L1MEg LINE L1 -4465 1619 1209 2 1139 577 284 7 7 chrX 72666268 72666417 -93983879 + B1F SINE Alu 1 149 0 2 1139 207 0 0 0 chrX 72666734 72666757 -93983539 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 2 1139 945 108 74 0 chrX 72666757 72666905 -93983391 - B2_Mm2 SINE B2 -36 159 1 2 1139 652 248 15 8 chrX 72667800 72667934 -93982362 + ID_B1 SINE B4 83 217 -7 2 1139 26 0 0 0 chrX 72667937 72667963 -93982333 + AT_rich Low_complexity Low_complexity 1 26 0 2 1139 1141 273 79 27 chrX 72668477 72669168 -93981128 - Lx7 LINE L1 -1312 6161 5431 2 1139 180 77 0 0 chrX 72669182 72669208 -93981088 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2 1139 975 41 0 0 chrX 72669208 72669329 -93980967 - B1_Mus1 SINE Alu -2 146 26 2 1139 639 257 23 171 chrX 72669211 72669352 -93980944 - B4 SINE B4 -71 221 107 2 1139 937 238 19 24 chrX 72669352 72669563 -93980733 - B3 SINE B2 -6 210 1 2 1139 639 257 23 171 chrX 72669563 72669679 -93980617 - B4 SINE B4 -186 106 2 2 1139 3688 63 0 4 chrX 72670334 72670826 -93979470 - L1Md_F2 LINE L1 0 6582 6099 2 1139 801 156 22 22 chrX 72670933 72671071 -93979225 - B1_Mus1 SINE Alu 0 148 11 2 1139 22 70 0 0 chrX 72671207 72671250 -93979046 + AT_rich Low_complexity Low_complexity 1 43 0 2 1139 1445 65 16 0 chrX 72671314 72671500 -93978796 + B2_Mm2 SINE B2 1 189 -6 2 1139 529 180 271 7 chrX 72671722 72671862 -93978434 - B3 SINE B2 -6 210 34 2 1139 183 42 0 0 chrX 72671888 72671912 -93978384 + (TTGG)n Simple_repeat Simple_repeat 4 27 0 3 1139 24 0 0 0 chrX 72672287 72672311 -93977985 + AT_rich Low_complexity Low_complexity 1 24 0 3 1139 572 231 148 1 chrX 72672311 72672485 -93977811 - MTD LTR MaLR -51 370 162 3 1139 220 211 19 0 chrX 72672538 72672590 -93977706 + GA-rich Low_complexity Low_complexity 2 54 0 3 1139 12195 74 47 68 chrX 72672590 72673327 -93976969 - L1VL4 LINE L1 -726 2833 2121 3 1139 304 85 43 0 chrX 72673327 72673374 -93976922 - B2_Mm1t SINE B2 -26 167 119 3 1139 335 59 196 0 chrX 72673383 72673434 -93976862 - B2_Mm2 SINE B2 -28 167 107 3 1139 1236 128 0 5 chrX 72673436 72673625 -93976671 - B2_Mm2 SINE B2 -7 188 1 3 1139 12195 92 42 51 chrX 72673625 72675515 -93974781 - L1VL4 LINE L1 -1451 2108 131 3 1139 5778 28 1 0 chrX 72675515 72676194 -93974102 - L1Md_A LINE L1 0 6582 5903 3 1139 5784 120 33 24 chrX 72676194 72676275 -93974021 - L1VL4 LINE L1 -6172 130 50 3 1139 726 268 10 25 chrX 72676300 72676499 -93973797 - B3A SINE B2 -2 196 1 3 1139 225 210 31 46 chrX 72677003 72677068 -93973228 + ID_B1 SINE B4 159 222 -2 3 1139 250 170 0 5 chrX 72677017 72677070 -93973226 + B1F SINE Alu 76 142 -7 3 1139 303 132 38 0 chrX 72677124 72677177 -93973119 - B1F1 SINE Alu -7 142 88 3 1139 652 244 104 0 chrX 72677230 72677365 -93972931 - B1_Mur1 SINE Alu 0 149 1 3 1139 21 71 0 0 chrX 72677375 72677417 -93972879 + AT_rich Low_complexity Low_complexity 1 42 0 3 1139 22 0 0 0 chrX 72677472 72677494 -93972802 + AT_rich Low_complexity Low_complexity 1 22 0 3 1139 313 327 57 19 chrX 72677617 72677776 -93972520 - L1MD3 LINE L1 -2 7993 7829 3 1139 253 316 92 0 chrX 72677841 72677917 -93972379 + B4 SINE B4 1 83 -209 3 1139 1895 56 0 20 chrX 72677954 72678207 -93972089 + L1_Mus1 LINE L1 6319 6566 -1 3 1139 261 336 96 0 chrX 72678739 72678864 -93971432 - MIRb SINE MIR -15 253 117 3 1139 457 248 37 0 chrX 72678906 72679015 -93971281 + PB1D7 SINE Alu 1 113 -7 3 1139 1133 210 10 5 chrX 72679101 72679307 -93970989 - B3 SINE B2 -9 207 1 3 1139 24 0 0 0 chrX 72679321 72679345 -93970951 + AT_rich Low_complexity Low_complexity 1 24 0 3 1139 310 271 14 11 chrX 72679551 72679669 -93970627 + L1_Rod LINE L1 5141 5303 -583 3 1139 980 218 15 20 chrX 72679839 72680036 -93970260 - B3 SINE B2 -1 215 20 3 1139 21 57 0 0 chrX 72680126 72680161 -93970135 + AT_rich Low_complexity Low_complexity 1 35 0 3 1139 693 143 42 0 chrX 72680343 72680462 -93969834 + URR1B DNA MER1_type 102 225 0 3 1139 853 143 0 8 chrX 72681277 72681411 -93968885 - B1_Mus2 SINE Alu -13 134 2 3 1139 453 19 0 0 chrX 72681566 72681620 -93968676 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 1139 457 315 101 0 chrX 72681673 72681851 -93968445 - L2a LINE L2 -266 3160 2965 3 1139 357 274 186 25 chrX 72681987 72682148 -93968148 - L2a LINE L2 -525 2894 2708 3 1139 1082 140 119 5 chrX 72682409 72682610 -93967686 - MurERV4-int LTR ERVK -5018 242 19 3 1139 511 133 102 0 chrX 72682611 72682709 -93967587 - RMER4A LTR ERVK -51 415 308 3 1139 1493 192 85 33 chrX 72682711 72683018 -93967278 - RMER4A LTR ERVK 0 466 144 3 1139 2741 165 28 64 chrX 72683387 72683968 -93966328 + RLTR31_Mm LTR ERVK 2 561 0 3 1139 321 269 13 2 chrX 72684239 72684332 -93965964 - BC1_Mm scRNA scRNA -56 96 3 3 1139 524 274 0 8 chrX 72684422 72684540 -93965756 + PB1D9 SINE Alu 3 119 -1 3 1139 204 231 0 0 chrX 72684640 72684692 -93965604 + T-rich Low_complexity Low_complexity 1 52 0 3 1139 1635 93 0 8 chrX 72684699 72684938 -93965358 - L1Md_F2 LINE L1 -2 6580 6344 3 1139 330 246 60 52 chrX 72684966 72685082 -93965214 - PB1D10 SINE Alu 0 117 1 3 1139 1221 120 10 5 chrX 72685706 72685898 -93964398 - B2_Mm2 SINE B2 -2 193 1 3 1139 1194 54 0 0 chrX 72685967 72686114 -93964182 - B1_Mus2 SINE Alu 0 147 1 3 1139 283 281 121 30 chrX 72686259 72686424 -93963872 + L1M4 LINE L1 3965 4144 -2002 3 1139 266 295 78 6 chrX 72686448 72686648 -93963648 + L1M4 LINE L1 4285 4497 -1649 3 1139 1066 210 88 8 chrX 72686658 72686898 -93963398 - MTD LTR MaLR -160 259 1 3 1139 298 206 44 0 chrX 72686905 72686973 -93963323 + L1M4 LINE L1 4528 4598 -1548 3 1139 1644 32 0 0 chrX 72687035 72687225 -93963071 - B2_Mm1t SINE B2 -3 190 1 3 1139 6579 119 42 7 chrX 72687234 72688569 -93961727 - Lx LINE L1 -5 6649 5280 3 1139 5783 157 4 73 chrX 72688569 72688844 -93961452 - Lx LINE L1 -2365 3518 3294 3 1139 1225 27 0 26 chrX 72688844 72688995 -93961301 - B1_Mus2 SINE Alu 0 147 1 3 1139 6519 83 5 3 chrX 72688995 72689940 -93960356 - Lx LINE L1 -604 3310 2380 3 1139 445 320 94 13 chrX 72689994 72690143 -93960153 - RSINE1 SINE B4 -2 163 3 3 1139 699 241 35 0 chrX 72690254 72690395 -93959901 - B1_Mus2 SINE Alu -1 146 1 3 1139 396 0 0 0 chrX 72690535 72690579 -93959717 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 1139 280 344 96 21 chrX 72691238 72691425 -93958871 - L1MEg LINE L1 -5883 201 1 3 1139 345 72 71 14 chrX 72693370 72693440 -93956856 + Lx3_Mus LINE L1 6056 6129 -880 3 1139 424 308 14 14 chrX 72693789 72693937 -93956359 + B1F SINE Alu 1 148 -1 3 1139 198 0 0 0 chrX 72694290 72694312 -93955984 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1139 723 207 15 0 chrX 72694342 72694477 -93955819 - B1_Mur2 SINE Alu -8 141 5 3 1139 207 0 0 0 chrX 72694801 72694824 -93955472 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1139 232 318 52 70 chrX 72694830 72694945 -93955351 - L2a LINE L2 -24 3402 3290 3 1139 185 276 179 26 chrX 72695859 72695937 -93954359 + MER5A DNA MER1_type 95 184 -5 3 1139 873 248 193 9 chrX 72696058 72696493 -93953803 + L1MD LINE L1 4680 5194 -952 3 1139 1173 296 129 15 chrX 72696517 72697166 -93953130 + L1ME1 LINE L1 5272 5994 -185 3 1139 520 265 59 0 chrX 72697382 72697518 -93952778 + B1F SINE Alu 1 144 -5 3 1139 240 283 50 0 chrX 72697902 72697962 -93952334 - PB1D7 SINE Alu -7 113 51 3 1139 22 0 0 0 chrX 72698139 72698161 -93952135 + AT_rich Low_complexity Low_complexity 1 22 0 3 1139 250 318 101 28 chrX 72698291 72698469 -93951827 + L2 LINE L2 2340 2530 -889 3 1139 337 310 75 12 chrX 72698860 72699095 -93951201 + L1MC4 LINE L1 6519 6806 -1236 3 1139 1047 263 70 12 chrX 72699100 72699571 -93950725 + L1M4 LINE L1 4806 5330 -816 3 1139 841 251 142 0 chrX 72700641 72700880 -93949416 + Lx2B LINE L1 6715 6987 -13 3 1139 1145 152 21 10 chrX 72700899 72701092 -93949204 + MTD LTR MaLR 225 419 0 3 1139 419 189 142 58 chrX 72701092 72701317 -93948979 + L1M2 LINE L1 4299 4542 -1601 3 1139 7712 94 57 5 chrX 72701362 72702927 -93947369 - Lx3A LINE L1 -699 6282 4652 3 1139 714 246 102 47 chrX 72702928 72703381 -93946915 - L1VL2 LINE L1 -5812 523 118 3 1139 4016 99 35 12 chrX 72703382 72703975 -93946321 + Lx LINE L1 6046 6652 -2 3 1139 1062 62 6 64 chrX 72703977 72704149 -93946147 - L1_Mur1 LINE L1 -1227 4659 4498 3 1139 303 288 23 23 chrX 72704243 72704371 -93945925 + MMSAT4 Satellite Satellite 41 168 0 3 1139 331 250 24 24 chrX 72704624 72704747 -93945549 + MMSAT4 Satellite Satellite 31 153 -15 3 1139 764 80 18 0 chrX 72705112 72705224 -93945072 + (GAAA)n Simple_repeat Simple_repeat 2 115 0 3 1139 13295 76 20 10 chrX 72705234 72707226 -93943070 + L1VL2 LINE L1 875 2889 -726 3 1139 783 142 0 0 chrX 72707231 72707365 -93942931 + (TTTC)n Simple_repeat Simple_repeat 4 137 0 3 1139 701 267 213 14 chrX 72707381 72707658 -93942638 + MTC LTR MaLR 38 369 -52 3 1139 2807 173 66 9 chrX 72707649 72708179 -93942117 + RMER4B LTR ERVK 26 585 0 3 1139 682 150 0 0 chrX 72708179 72708292 -93942004 - Lx5 LINE L1 -1283 5767 5655 3 1139 554 261 67 43 chrX 72708318 72708691 -93941605 + L1MB8 LINE L1 3039 3420 -2726 3 1139 7473 73 4 1 chrX 72708689 72709677 -93940619 - L1_Mus1 LINE L1 -200 5683 4693 3 1139 6521 81 14 0 chrX 72709676 72710542 -93939754 + L1_Mus1 LINE L1 5690 6567 0 3 1139 641 259 119 64 chrX 72710565 72710889 -93939407 + L1MB8 LINE L1 3408 3765 -2381 3 1139 7352 118 65 34 chrX 72710889 72712143 -93938153 + Lx4A LINE L1 5754 7046 -12 3 1139 641 259 119 64 chrX 72712143 72712222 -93938074 + L1MB8 LINE L1 3766 3833 -2313 3 1139 255 79 0 0 chrX 72712227 72712265 -93938031 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 1139 459 237 72 0 chrX 72712273 72712370 -93937926 + PB1D7 SINE Alu 3 106 -14 3 1139 2853 64 26 5 chrX 72712489 72712868 -93937428 - L1Md_F2 LINE L1 -12 6570 6184 3 1139 1285 20 0 0 chrX 72712868 72713015 -93937281 + L1Md_F2 LINE L1 6029 6175 -407 3 1139 647 274 25 21 chrX 72713071 72713356 -93936940 + RMER15 LTR ERVL 27 400 -175 3 1139 869 263 7 22 chrX 72713420 72713692 -93936604 + L1MB8 LINE L1 3919 4186 -1960 3 1139 387 292 62 0 chrX 72713732 72713845 -93936451 - B1F SINE Alu -27 122 3 3 1139 502 302 0 31 chrX 72713925 72714055 -93936241 + RSINE1 SINE B4 4 129 -36 3 1139 459 0 0 0 chrX 72714081 72714132 -93936164 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 1139 252 216 108 0 chrX 72714146 72714220 -93936076 + L1M2 LINE L1 4282 4363 -1780 3 1139 498 251 73 5 chrX 72714390 72714582 -93935714 + L1MB8 LINE L1 4996 5200 -946 3 1139 811 138 62 0 chrX 72714588 72714718 -93935578 + B1_Mus1 SINE Alu 2 139 -9 3 1139 556 46 23 11 chrX 72714733 72714821 -93935475 + (TAGA)n Simple_repeat Simple_repeat 2 90 0 3 1139 344 242 31 62 chrX 72715142 72715271 -93935025 + ID4 SINE ID 1 121 -31 3 1139 420 264 35 69 chrX 72715307 72715537 -93934759 + L1MB8 LINE L1 5724 5938 -240 3 1139 360 304 79 76 chrX 72715557 72715717 -93934579 + L1MEc LINE L1 790 947 -5453 3 1139 835 212 91 0 chrX 72715717 72715915 -93934381 - B3 SINE B2 0 216 1 3 1139 360 304 79 76 chrX 72715915 72716096 -93934200 + L1MEc LINE L1 948 1132 -5268 3 1139 403 254 123 0 chrX 72716713 72716835 -93933461 - B1F SINE Alu 0 149 13 3 1139 903 232 4 87 chrX 72716838 72717079 -93933217 + ID_B1 SINE B4 2 222 -2 3 1139 241 176 0 19 chrX 72717079 72717131 -93933165 + GA-rich Low_complexity Low_complexity 1 51 0 3 1139 9442 16 0 0 chrX 72717378 72718460 -93931836 + L1Md_T LINE L1 4505 5586 -297 3 1139 8481 30 0 0 chrX 72718460 72719454 -93930842 + L1Md_T LINE L1 5587 6580 -2 3 1139 324 0 0 0 chrX 72720342 72720378 -93929918 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1139 1193 68 37 6 chrX 72721792 72721955 -93928341 + B2_Mm2 SINE B2 3 170 -25 4 1139 198 0 0 0 chrX 72722092 72722114 -93928182 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 1139 630 294 0 63 chrX 72722225 72722399 -93927897 - RSINE1 SINE B4 0 165 3 4 1139 230 188 81 169 chrX 72722544 72722704 -93927592 + YREP_Mm Unknown Unknown 146 291 -1521 4 1139 474 226 15 95 chrX 72722578 72722715 -93927581 - B1_Mur1 SINE Alu -10 139 14 4 1139 468 0 0 0 chrX 72722854 72722906 -93927390 + (GA)n Simple_repeat Simple_repeat 2 53 0 4 1139 198 0 0 0 chrX 72723349 72723371 -93926925 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 4 1139 220 339 0 0 chrX 72723431 72723496 -93926800 + L2b LINE L2 3311 3375 0 4 1139 31302 103 8 11 chrX 72723506 72729514 -93920782 + L1_Mus1 LINE L1 563 6555 -12 4 1139 969 41 0 0 chrX 72730166 72730288 -93920008 + B1_Mus1 SINE Alu 3 124 -24 4 1139 265 24 23 23 chrX 72730288 72730331 -93919965 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1139 276 30 0 0 chrX 72730344 72730377 -93919919 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1139 24 0 0 0 chrX 72730760 72730784 -93919512 + AT_rich Low_complexity Low_complexity 1 24 0 4 1139 21 0 0 0 chrX 72730883 72730904 -93919392 + AT_rich Low_complexity Low_complexity 1 21 0 4 1139 795 58 0 9 chrX 72731446 72731551 -93918745 - L1_Mus3 LINE L1 -473 6093 5990 4 1139 3789 84 31 18 chrX 72731552 72732095 -93918201 + L1_Mus3 LINE L1 6083 6632 -6 4 1139 4716 103 36 1 chrX 72732179 72732870 -93917426 + Lx2 LINE L1 6280 6994 -3 4 1139 3155 54 3 3 chrX 72733633 72734025 -93916271 + MTA_Mm LTR MaLR 5 396 0 4 1139 225 297 13 39 chrX 72734034 72734111 -93916185 - B4 SINE B4 -216 76 2 4 1139 556 248 21 7 chrX 72734470 72734612 -93915684 - B1F SINE Alu -1 148 5 4 1139 467 136 34 0 chrX 72735573 72735691 -93914605 + RMER17B LTR ERVK 312 433 -525 4 1139 199 282 154 0 chrX 72736559 72736637 -93913659 - L2a LINE L2 -4 3422 3333 4 1139 2639 266 82 8 chrX 72736716 72737342 -93912954 - Lx6 LINE L1 -27 7433 6759 4 1139 201 39 0 0 chrX 72737342 72737368 -93912928 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1139 2639 266 82 8 chrX 72737368 72737473 -93912823 - Lx6 LINE L1 -702 6758 6649 4 1139 1973 212 27 36 chrX 72737474 72737949 -93912347 - Lx6 LINE L1 -1270 6190 5720 4 1139 2953 97 16 42 chrX 72737946 72738397 -93911899 - Lx3B LINE L1 -51 6922 6484 4 1139 4871 84 3 21 chrX 72738388 72739107 -93911189 + Lx3B LINE L1 5790 6495 -478 4 1139 36 23 0 0 chrX 72739479 72739522 -93910774 + AT_rich Low_complexity Low_complexity 1 43 0 4 1139 1061 90 7 0 chrX 72739830 72739974 -93910322 + B1_Mus1 SINE Alu 4 148 0 4 1139 243 329 0 0 chrX 72739987 72740057 -93910239 + MER63B DNA AcHobo 324 393 -43 4 1139 495 0 0 0 chrX 72740343 72740398 -93909898 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 1139 279 203 0 0 chrX 72740477 72740536 -93909760 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 1139 916 270 20 0 chrX 72740543 72740739 -93909557 - ID_B1 SINE B4 -21 203 4 4 1139 4679 34 0 5 chrX 72741153 72741711 -93908585 - L1Md_F2 LINE L1 -7 6575 6021 4 1139 628 275 14 0 chrX 72742272 72742410 -93907886 - ID_B1 SINE B4 -1 223 84 4 1139 22 35 0 0 chrX 72742482 72742511 -93907785 + AT_rich Low_complexity Low_complexity 1 29 0 4 1139 229 338 114 120 chrX 72742620 72742936 -93907360 + L2a LINE L2 2746 3059 -360 4 1139 1719 57 145 0 chrX 72742936 72743198 -93907098 + BGLII LTR ERVK 1 300 -121 4 1139 594 242 31 8 chrX 72743438 72743567 -93906729 + RSINE1 SINE B4 5 136 -29 4 1139 274 362 11 0 chrX 72743715 72743809 -93906487 + L2a LINE L2 3332 3426 0 4 1139 329 209 71 167 chrX 72744080 72744163 -93906133 - PB1D9 SINE Alu -6 114 40 4 1139 2732 105 31 14 chrX 72744163 72744608 -93905688 - RLTR11B LTR ERVK 0 453 1 4 1139 329 209 71 167 chrX 72744608 72744650 -93905646 - PB1D9 SINE Alu -81 39 1 4 1139 21 71 0 0 chrX 72744656 72744698 -93905598 + AT_rich Low_complexity Low_complexity 1 42 0 4 1140 1874 249 40 73 chrX 72745470 72746016 -93904280 + RMER1B Other Other 7 534 -532 4 1140 3476 221 92 57 chrX 72746052 72747185 -93903111 + RMER1A Other Other 4 1014 -16 4 1140 311 320 44 122 chrX 72747185 72747644 -93902652 + L1M2 LINE L1 2296 2718 -3425 4 1140 1064 74 0 0 chrX 72747737 72747872 -93902424 + B1_Mus2 SINE Alu 1 135 -12 4 1140 468 0 0 0 chrX 72747873 72747925 -93902371 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 4 1140 1199 48 0 0 chrX 72747927 72748073 -93902223 + B1_Mus2 SINE Alu 2 147 0 4 1140 434 182 0 0 chrX 72748261 72748327 -93901969 - B3 SINE B2 -150 66 1 4 1140 44 99 0 0 chrX 72748423 72748565 -93901731 + AT_rich Low_complexity Low_complexity 1 142 0 4 1140 2062 58 36 4 chrX 72748670 72748945 -93901351 - L1_Mus1 LINE L1 0 6567 6284 4 1140 416 276 31 0 chrX 72748951 72749049 -93901247 + B1F SINE Alu 18 118 -31 4 1140 322 205 141 0 chrX 72749307 72749385 -93900911 + MTE2b LTR MaLR 4 92 -287 4 1140 195 125 0 0 chrX 72749386 72749426 -93900870 + (T)n Simple_repeat Simple_repeat 1 40 0 4 1140 21 0 0 0 chrX 72749446 72749467 -93900829 + AT_rich Low_complexity Low_complexity 1 21 0 4 1140 3659 83 0 8 chrX 72749524 72750019 -93900277 - L1_Mus2 LINE L1 -1 6565 6075 4 1140 7282 80 1 1 chrX 72750019 72751158 -93899138 + L1_Mus2 LINE L1 4877 6014 -552 4 1140 1160 82 0 0 chrX 72751635 72751782 -93898514 - B1_Mm SINE Alu 0 147 1 4 1140 269 345 109 0 chrX 72752173 72752292 -93898004 - L2b LINE L2 -20 3355 3224 4 1140 231 372 13 0 chrX 72752610 72752688 -93897608 + B1_Mus1 SINE Alu 19 97 -51 4 1140 200 184 0 39 chrX 72752734 72752785 -93897511 + T-rich Low_complexity Low_complexity 2 50 0 4 1140 4899 109 74 7 chrX 72753302 72754070 -93896226 - Lx LINE L1 -2 6652 5833 4 1140 4456 145 0 4 chrX 72754070 72754769 -93895527 + Lx LINE L1 5147 5842 -41 4 1140 876 102 94 0 chrX 72755826 72755954 -93894342 + B1_Mus1 SINE Alu 1 140 -8 4 1140 24 32 0 0 chrX 72755984 72756015 -93894281 + AT_rich Low_complexity Low_complexity 1 31 0 4 1140 30 59 0 0 chrX 72756239 72756290 -93894006 + AT_rich Low_complexity Low_complexity 1 51 0 4 1140 254 247 65 0 chrX 72756331 72756424 -93893872 - L1MEe LINE L1 -4480 374 276 4 1140 213 254 0 66 chrX 72756454 72756530 -93893766 - PB1D10 SINE Alu -7 110 40 4 1140 3415 142 17 70 chrX 72756623 72757312 -93892984 - Lx2B LINE L1 -5 6995 6343 4 1140 256 297 42 28 chrX 72757454 72757596 -93892700 + Lx8 LINE L1 7328 7471 -2 4 1140 295 315 0 21 chrX 72757778 72757872 -93892424 + GA-rich Low_complexity Low_complexity 1 92 0 4 1140 31 26 0 0 chrX 72758046 72758084 -93892212 + AT_rich Low_complexity Low_complexity 1 38 0 4 1140 700 328 4 4 chrX 72758349 72758594 -93891702 - Lx9 LINE L1 -203 7441 7197 4 1140 3289 38 2 5 chrX 72758604 72759001 -93891295 + MTA_Mm LTR MaLR 1 396 0 4 1140 206 32 0 31 chrX 72761066 72761098 -93889198 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 1140 388 353 8 8 chrX 72761103 72761220 -93889076 - B1F SINE Alu -32 117 1 4 1140 399 290 93 0 chrX 72761698 72761805 -93888491 - PB1D10 SINE Alu 0 117 1 4 1140 451 281 41 95 chrX 72761805 72761888 -93888408 - ID SINE ID -139 85 12 4 1140 757 293 23 42 chrX 72761894 72762204 -93888092 + Lx7 LINE L1 7162 7465 -231 4 1140 441 266 126 54 chrX 72762712 72762990 -93887306 - L1MA4 LINE L1 -409 5891 5594 4 1140 331 314 75 58 chrX 72763061 72763277 -93887019 - RSINE1 SINE B4 -9 283 68 4 1140 324 0 0 0 chrX 72763277 72763313 -93886983 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 4 1140 322 339 118 77 chrX 72763313 72763376 -93886920 - B4 SINE B4 -208 84 3 4 1140 810 251 107 5 chrX 72763526 72763722 -93886574 - ID_B1 SINE B4 -7 217 2 4 1140 320 275 33 11 chrX 72763727 72763819 -93886477 - PB1D10 SINE Alu 0 117 24 4 1140 2225 257 114 27 chrX 72763822 72764891 -93885405 - L1MA4 LINE L1 -836 5464 4312 4 1140 249 333 12 23 chrX 72764910 72764996 -93885300 - 5S rRNA rRNA -36 85 1 4 1140 359 278 162 23 chrX 72764996 72765169 -93885127 - L1MA4 LINE L1 -1870 4270 4074 4 1140 1084 84 58 0 chrX 72765581 72765735 -93884561 - B2_Mm2 SINE B2 -14 181 19 4 1140 30 0 0 0 chrX 72765743 72765773 -93884523 + AT_rich Low_complexity Low_complexity 1 30 0 4 1140 709 210 55 13 chrX 72765777 72765959 -93884337 + B3 SINE B2 3 183 -12 4 1140 926 245 27 0 chrX 72765952 72766136 -93884160 - B3 SINE B2 -8 208 20 4 1140 39 50 0 0 chrX 72766244 72766304 -93883992 + AT_rich Low_complexity Low_complexity 1 60 0 4 1140 23 0 0 0 chrX 72766347 72766370 -93883926 + AT_rich Low_complexity Low_complexity 1 23 0 4 1140 885 45 0 0 chrX 72766370 72766481 -93883815 - B1_Mm SINE Alu -1 146 36 4 1140 1139 55 7 7 chrX 72766497 72766644 -93883652 - B1_Mus1 SINE Alu 0 148 2 4 1140 2575 194 43 29 chrX 72767171 72767818 -93882478 - L1_Rod LINE L1 -2237 3610 2955 4 1140 2678 129 47 28 chrX 72767805 72768300 -93881996 - L1_Rod LINE L1 -3112 2735 2232 4 1140 406 308 33 0 chrX 72768324 72768444 -93881852 - MIR SINE MIR -100 162 39 4 1140 3044 88 0 5 chrX 72768805 72769217 -93881079 - L1_Mus2 LINE L1 0 6566 6157 4 1140 634 130 0 0 chrX 72769218 72769318 -93880978 + L1_Mus2 LINE L1 6045 6144 -422 4 1140 207 0 0 0 chrX 72769487 72769510 -93880786 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1140 810 40 54 18 chrX 72769591 72769717 -93880579 - B1_Mm SINE Alu 0 150 2 4 1140 985 257 65 26 chrX 72769866 72770098 -93880198 + B4 SINE B4 1 241 -51 4 1140 189 147 0 0 chrX 72770111 72770145 -93880151 + (CATA)n Simple_repeat Simple_repeat 3 36 0 4 1140 236 237 101 22 chrX 72770151 72770289 -93880007 - HAL1b LINE L1 -271 1738 1590 4 1140 791 198 76 16 chrX 72770296 72770481 -93879815 - B3 SINE B2 -4 212 17 4 1140 249 57 0 0 chrX 72770568 72770603 -93879693 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 4 1140 809 172 22 0 chrX 72770603 72770737 -93879559 - B1_Mur2 SINE Alu -11 138 2 4 1140 2143 271 112 19 chrX 72771106 72771803 -93878493 - Lx8 LINE L1 -5 7468 6707 4 1140 25 0 0 0 chrX 72771903 72771928 -93878368 + AT_rich Low_complexity Low_complexity 1 25 0 5 1140 340 364 124 24 chrX 72772077 72772346 -93877950 + L2 LINE L2 2726 3018 -401 5 1140 276 30 0 0 chrX 72772346 72772379 -93877917 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 5 1140 340 364 124 24 chrX 72772379 72772399 -93877897 + L2 LINE L2 3019 3044 -375 5 1140 665 262 58 6 chrX 72772631 72772651 -93877645 - B3A SINE B2 -16 182 164 5 1140 754 69 38 0 chrX 72772651 72772782 -93877514 + (GA)n Simple_repeat Simple_repeat 1 136 0 5 1140 665 262 58 6 chrX 72772782 72772934 -93877362 - B3A SINE B2 -35 163 2 5 1140 315 316 192 13 chrX 72773270 72773421 -93876875 - MLT1E2 LTR MaLR -234 393 216 5 1140 394 303 40 46 chrX 72773594 72773767 -93876529 + L1ME3A LINE L1 5891 6062 -111 5 1140 345 267 0 0 chrX 72773922 72774012 -93876284 - L1MA5 LINE L1 -23 6277 6188 5 1140 324 265 192 10 chrX 72774071 72774170 -93876126 + PB1D7 SINE Alu 1 117 -3 5 1140 468 252 44 0 chrX 72774505 72774665 -93875631 - L1MB7 LINE L1 -26 6148 5970 5 1140 283 222 191 6 chrX 72774727 72774883 -93875413 - L1MB7 LINE L1 -347 5837 5661 5 1140 202 182 0 0 chrX 72774893 72774926 -93875370 + (CTTG)n Simple_repeat Simple_repeat 2 34 0 5 1140 394 248 145 15 chrX 72774926 72775057 -93875239 - B1_Mur2 SINE Alu 0 149 2 5 1140 319 271 0 0 chrX 72775152 72775211 -93875085 - ID4_ SINE ID -23 60 2 5 1140 246 62 0 0 chrX 72775211 72775243 -93875053 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 5 1140 349 239 0 0 chrX 72775245 72775316 -93874980 - PB1D10 SINE Alu -17 100 30 5 1140 469 242 49 16 chrX 72775338 72775460 -93874836 - ID_B1 SINE B4 0 224 99 5 1140 357 342 0 0 chrX 72775470 72775587 -93874709 - PB1D10 SINE Alu 0 117 1 5 1140 627 311 105 45 chrX 72775644 72775977 -93874319 - MLT1A0 LTR MaLR 0 365 13 5 1140 321 222 42 0 chrX 72776229 72776301 -93873995 - MER58B DNA MER1_type 0 341 267 5 1140 407 315 0 9 chrX 72776847 72776959 -93873337 + PB1D10 SINE Alu 1 111 -6 5 1140 890 273 125 6 chrX 72777285 72777598 -93872698 - MTE2a LTR MaLR -8 371 22 5 1140 779 27 63 0 chrX 72777656 72777767 -93872529 + B1_Mus1 SINE Alu 31 148 0 5 1140 190 265 20 0 chrX 72778737 72778786 -93871510 + L2a LINE L2 3306 3355 -71 5 1140 1164 48 0 14 chrX 72778940 72779088 -93871208 - B1_Mus2 SINE Alu -1 146 1 5 1140 212 0 36 0 chrX 72780516 72780544 -93869752 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1140 1077 59 0 0 chrX 72780544 72780680 -93869616 - B1_Mus2 SINE Alu -11 136 1 5 1140 229 188 0 0 chrX 72780749 72780791 -93869505 + T-rich Low_complexity Low_complexity 7 48 0 5 1140 1117 68 0 0 chrX 72780791 72780938 -93869358 - B1_Mus2 SINE Alu 0 147 1 5 1140 1516 26 5 10 chrX 72780938 72781137 -93869159 - L1Md_F3 LINE L1 0 6584 6392 5 1140 1338 47 0 0 chrX 72781137 72781309 -93868987 + L1_Mm LINE L1 4215 4386 -1497 5 1140 21 0 0 0 chrX 72781405 72781426 -93868870 + AT_rich Low_complexity Low_complexity 1 21 0 5 1140 23 0 0 0 chrX 72781505 72781528 -93868768 + AT_rich Low_complexity Low_complexity 1 23 0 5 1140 22 0 0 0 chrX 72781625 72781647 -93868649 + AT_rich Low_complexity Low_complexity 1 22 0 5 1140 1142 62 7 0 chrX 72781656 72781802 -93868494 + B1_Mm SINE Alu 1 147 0 5 1140 510 260 55 0 chrX 72782135 72782262 -93868034 - B1F1 SINE Alu -6 143 10 5 1140 255 294 47 78 chrX 72782166 72782295 -93868001 - MT2B2 LTR ERVL -321 263 139 5 1140 236 323 146 0 chrX 72782395 72782491 -93867805 - PB1D10 SINE Alu -2 115 6 5 1140 389 274 113 0 chrX 72783389 72783495 -93866801 - B3A SINE B2 -80 118 1 5 1140 755 249 32 11 chrX 72783526 72783713 -93866583 - B3A SINE B2 -5 193 3 5 1140 970 165 148 0 chrX 72783762 72783944 -93866352 - B3 SINE B2 -6 210 2 5 1140 582 237 44 8 chrX 72784456 72784643 -93865653 - ORR1D1 LTR MaLR 0 370 143 5 1140 1775 168 235 19 chrX 72784650 72785080 -93865216 - Lx5 LINE L1 -7 7043 6521 5 1140 4263 120 38 13 chrX 72785078 72785787 -93864509 + L1_Mur2 LINE L1 4106 4832 -1045 5 1140 596 239 14 27 chrX 72785795 72785941 -93864355 - ORR1D1 LTR MaLR -230 144 1 5 1140 463 218 176 30 chrX 72786242 72786396 -93863900 - B2_Mm2 SINE B2 -20 173 1 5 1140 1328 62 66 11 chrX 72786496 72786677 -93863619 - B2_Mm2 SINE B2 -4 191 1 5 1140 221 169 25 38 chrX 72786856 72786936 -93863360 + CT-rich Low_complexity Low_complexity 1 79 0 5 1140 284 209 72 29 chrX 72786963 72787032 -93863264 - ID_B1 SINE B4 -1 223 152 5 1140 243 244 87 65 chrX 72787032 72787055 -93863241 - PB1D9 SINE Alu -1 119 26 5 1140 503 66 13 0 chrX 72787561 72787637 -93862659 + L1_Mus1 LINE L1 6491 6567 0 5 1140 1463 270 92 42 chrX 72787646 72788546 -93861750 + L1MA8 LINE L1 2233 3177 -2966 5 1140 305 218 89 13 chrX 72788638 72788717 -93861579 + PB1 SINE Alu 24 108 -19 5 1140 257 286 19 48 chrX 72788717 72788820 -93861476 + GA-rich Low_complexity Low_complexity 1 100 0 5 1140 788 150 42 30 chrX 72788854 72788977 -93861319 + L1_Mus3 LINE L1 6472 6601 -37 5 1140 1588 81 5 0 chrX 72788977 72789188 -93861108 + L1_Mus2 LINE L1 6354 6565 -1 5 1140 788 150 42 30 chrX 72789188 72789229 -93861067 + L1_Mus3 LINE L1 6602 6638 0 5 1140 405 269 0 0 chrX 72789334 72789442 -93860854 + L1MA8 LINE L1 3472 3579 -2564 5 1140 1778 245 121 57 chrX 72789463 72790316 -93859980 + L1MA8 LINE L1 5255 6161 -130 5 1140 288 312 123 76 chrX 72790330 72790607 -93859689 + B4A SINE B4 2 291 -1 5 1140 27283 75 12 6 chrX 72790943 72794510 -93855786 - L1_Mus1 LINE L1 0 6567 2957 5 1140 7365 25 17 1 chrX 72794510 72795391 -93854905 + L1Md_F3 LINE L1 5676 6570 -14 5 1140 27283 82 12 8 chrX 72795391 72796304 -93853992 - L1_Mus1 LINE L1 -2927 2956 2062 5 1140 3999 166 44 27 chrX 72796304 72797083 -93853213 - L1_Mus1 LINE L1 -5438 1178 387 5 1140 250 317 0 12 chrX 72797126 72797209 -93853087 - ID4 SINE ID 0 83 2 5 1140 487 259 50 142 chrX 72797404 72797706 -93852590 - L1M4c LINE L1 -3960 2424 2151 5 1140 213 159 0 22 chrX 72797754 72797799 -93852497 + T-rich Low_complexity Low_complexity 2 45 0 5 1140 293 333 0 0 chrX 72798040 72798112 -93852184 + RSINE1 SINE B4 82 153 -12 5 1140 384 22 0 0 chrX 72798685 72798730 -93851566 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 1140 624 229 468 16 chrX 72798874 72799126 -93851170 + ORR1D2 LTR MaLR 5 370 0 5 1140 341 118 0 44 chrX 72799252 72799324 -93850972 - L1_Rod LINE L1 -1081 5065 4936 5 1140 1332 164 28 28 chrX 72799320 72799450 -93850846 + Lx9 LINE L1 7223 7348 -296 5 1140 2932 47 36 13 chrX 72799450 72799837 -93850459 - MTA_Mm LTR MaLR 0 396 1 5 1140 1332 164 331 24 chrX 72799837 72800059 -93850237 + Lx9 LINE L1 7349 7643 -1 5 1140 919 251 70 26 chrX 72800160 72800389 -93849907 - Lx8 LINE L1 -94 7379 7141 5 1140 338 274 84 9 chrX 72800392 72800499 -93849797 + Lx8 LINE L1 6431 6545 -928 5 1140 270 0 0 0 chrX 72800501 72800531 -93849765 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 5 1140 680 196 25 56 chrX 72800534 72800696 -93849600 - Lx4B LINE L1 -21 7037 6881 5 1140 8680 135 53 6 chrX 72800694 72802286 -93848010 - L1_Mur2 LINE L1 -1395 4482 2816 5 1140 3670 107 5 1 chrX 72802283 72802913 -93847383 - Lx LINE L1 -715 5939 5309 5 1140 23 0 0 0 chrX 72802929 72802952 -93847344 + AT_rich Low_complexity Low_complexity 1 23 0 5 1140 259 86 0 0 chrX 72803390 72803425 -93846871 - L1_Mur2 LINE L1 -530 5347 5313 5 1140 5700 38 16 0 chrX 72803425 72804117 -93846179 + L1Md_T LINE L1 4884 5586 -297 5 1140 8477 32 0 0 chrX 72804117 72805113 -93845183 + L1Md_T LINE L1 5587 6582 0 5 1140 1186 50 0 0 chrX 72805115 72805256 -93845040 + L1Md_F2 LINE L1 5446 5586 -297 5 1140 7889 51 2 3 chrX 72805256 72806248 -93844048 + L1Md_F2 LINE L1 5587 6577 -5 5 1140 705 71 286 0 chrX 72806248 72806289 -93844007 - L1_Mur2 LINE L1 -566 5311 5234 5 1140 6553 82 82 12 chrX 72806289 72807307 -93842989 - Lx3_Mus LINE L1 0 7009 5920 5 1140 705 71 286 0 chrX 72807307 72807405 -93842891 - L1_Mur2 LINE L1 -644 5233 5133 5 1140 794 236 151 0 chrX 72807405 72807617 -93842679 - ORR1B2 LTR MaLR -123 244 1 5 1140 1479 203 19 13 chrX 72807662 72807972 -93842324 - RLTR11A LTR ERVK 0 528 217 5 1140 23 33 0 0 chrX 72808129 72808159 -93842137 + AT_rich Low_complexity Low_complexity 1 30 0 5 1140 1380 95 20 10 chrX 72808692 72808894 -93841402 - RLTR11B LTR ERVK -1 452 249 5 1140 297 128 0 0 chrX 72809079 72809126 -93841170 + (CCCCCT)n Simple_repeat Simple_repeat 4 50 0 5 1140 666 130 9 9 chrX 72809248 72809357 -93840939 - RLTR15 LTR ERVK -6 353 245 5 1140 691 140 21 85 chrX 72809335 72809476 -93840820 - RLTR15 LTR ERVK -227 132 1 5 1140 542 210 93 33 chrX 72809491 72809673 -93840623 - Zaphod DNA Tip100 -3279 752 560 5 1140 622 306 97 56 chrX 72809703 72810237 -93840059 + L1MD2 LINE L1 14 960 -5587 5 1140 534 31 0 0 chrX 72810593 72810657 -93839639 + (TA)n Simple_repeat Simple_repeat 1 64 0 5 1140 424 362 56 19 chrX 72811119 72811389 -93838907 + L1MD2 LINE L1 4094 4373 -2171 5 1140 2680 129 97 8 chrX 72811407 72811883 -93838413 - RLTR11A LTR ERVK -10 518 1 5 1140 782 127 0 16 chrX 72812345 72812473 -93837823 + B2_Mm2 SINE B2 70 195 0 5 1140 779 272 40 0 chrX 72812821 72812994 -93837302 + B3A SINE B2 3 182 -16 5 1140 216 0 0 0 chrX 72813007 72813031 -93837265 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1140 509 228 0 0 chrX 72813415 72813507 -93836789 + B1F SINE Alu 47 138 -11 5 1140 297 349 53 8 chrX 72813872 72814005 -93836291 - MLT1L LTR MaLR -74 536 398 5 1140 324 327 57 45 chrX 72814197 72814373 -93835923 - MIRb SINE MIR -44 224 47 5 1140 333 323 84 65 chrX 72814680 72814955 -93835341 - L2 LINE L2 -495 2924 2645 5 1140 1349 111 27 27 chrX 72815291 72815513 -93834783 - URR1A DNA MER1_type 0 226 5 5 1140 313 339 33 0 chrX 72815681 72815802 -93834494 - L2a LINE L2 -306 3120 2996 5 1140 347 312 102 0 chrX 72815802 72815930 -93834366 + B3A SINE B2 7 147 -51 5 1140 504 0 0 0 chrX 72815936 72815992 -93834304 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 1140 21 0 0 0 chrX 72815993 72816014 -93834282 + AT_rich Low_complexity Low_complexity 1 21 0 5 1140 1362 318 106 22 chrX 72816025 72816703 -93833593 - L2a LINE L2 -438 2981 2247 5 1140 189 279 97 16 chrX 72818879 72818941 -93831355 + MIRb SINE MIR 130 196 -72 5 1140 1116 225 5 0 chrX 72820765 72820974 -93829322 + B3 SINE B2 2 211 -5 6 1140 277 306 161 16 chrX 72821161 72821347 -93828949 - Tigger15a DNA TcMar -159 556 344 6 1140 373 221 0 38 chrX 72821822 72821902 -93828394 - PB1D10 SINE Alu -32 85 9 6 1140 39 0 0 0 chrX 72823708 72823747 -93826549 + AT_rich Low_complexity Low_complexity 1 39 0 6 1140 431 198 12 0 chrX 72823987 72824073 -93826223 - L1M2 LINE L1 -692 5599 5513 6 1140 342 0 0 0 chrX 72824074 72824112 -93826184 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1140 785 225 0 18 chrX 72824147 72824310 -93825986 - U1 snRNA snRNA -5 160 1 6 1140 329 228 77 35 chrX 72824311 72824469 -93825827 - L1M2 LINE L1 -811 5489 5323 6 1140 4098 86 53 2 chrX 72824469 72825052 -93825244 - Lx LINE L1 -7 6647 6035 6 1140 323 254 58 81 chrX 72825052 72825116 -93825180 - L1M2 LINE L1 -978 5322 5272 6 1140 892 188 70 1 chrX 72825083 72825283 -93825013 - L1_Mm LINE L1 -1251 4895 4685 6 1140 9082 143 63 27 chrX 72825521 72827289 -93823007 - L1_Mur2 LINE L1 -1184 4693 2861 6 1140 518 108 0 12 chrX 72827290 72827374 -93822922 + (TTCC)n Simple_repeat Simple_repeat 3 85 0 6 1140 496 180 81 0 chrX 72827376 72827436 -93822860 - MusHAL1 LINE L1 -1028 1684 1625 6 1140 321 26 0 0 chrX 72827436 72827474 -93822822 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 1140 496 180 81 0 chrX 72827474 72827524 -93822772 - MusHAL1 LINE L1 -1088 1624 1566 6 1140 2969 23 42 3 chrX 72827524 72827877 -93822419 + IAPLTR1_Mm LTR ERVK 1 367 0 6 1140 6396 60 102 12 chrX 72827877 72828773 -93821523 + IAPEz-int LTR ERVK 8 983 -5498 6 1140 27421 18 1 2 chrX 72828757 72831857 -93818439 + IAPEz-int LTR ERVK 3384 6481 0 6 1140 2982 20 42 3 chrX 72831857 72832210 -93818086 + IAPLTR1_Mm LTR ERVK 1 367 0 6 1140 2644 109 5 0 chrX 72832210 72832606 -93817690 - MusHAL1 LINE L1 -1142 1570 1173 6 1140 6139 110 22 4 chrX 72832606 72833521 -93816775 + ORR1A2-int LTR MaLR 1033 1963 0 6 1140 2303 76 32 71 chrX 72833521 72833861 -93816435 + ORR1A2 LTR MaLR 1 327 0 6 1140 855 303 134 25 chrX 72833861 72834662 -93815634 + L1M2 LINE L1 4525 5480 -811 6 1140 735 179 67 0 chrX 72834667 72834801 -93815495 + B1_Mur2 SINE Alu 2 144 -5 6 1140 319 263 0 50 chrX 72834801 72834901 -93815395 + GA-rich Low_complexity Low_complexity 6 100 0 6 1140 8168 24 0 0 chrX 72834916 72835921 -93814375 - L1_Mm LINE L1 -970 4913 3909 6 1140 3781 18 0 0 chrX 72835921 72836378 -93813918 + L1Md_T LINE L1 5130 5586 -297 6 1140 9027 5 0 0 chrX 72836378 72837374 -93812922 + L1Md_T LINE L1 5587 6582 0 6 1140 545 282 28 47 chrX 72837407 72837558 -93812738 + Lx9 LINE L1 7225 7377 -267 6 1140 2028 123 52 0 chrX 72837558 72837868 -93812428 + ORR1A3 LTR MaLR 1 326 0 6 1140 545 282 28 47 chrX 72837868 72837953 -93812343 + Lx9 LINE L1 7378 7461 -183 6 1140 710 53 11 0 chrX 72837953 72838048 -93812248 + (TA)n Simple_repeat Simple_repeat 2 97 0 6 1140 545 282 28 47 chrX 72838048 72838063 -93812233 + Lx9 LINE L1 7462 7472 -172 6 1140 13337 48 1 1 chrX 72838080 72840518 -93809778 - L1Md_T LINE L1 0 6582 4146 6 1140 201 74 0 0 chrX 72840521 72840548 -93809748 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1140 219 232 0 0 chrX 72840552 72840608 -93809688 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 1140 538 282 77 102 chrX 72840613 72841052 -93809244 + RLTR26 LTR ERVK 2 523 -104 6 1140 262 191 112 19 chrX 72841273 72841380 -93808916 + Lx9 LINE L1 7508 7624 -20 6 1140 405 291 17 11 chrX 72841414 72841588 -93808708 + L1M2 LINE L1 5599 5773 -518 6 1140 357 318 70 35 chrX 72841780 72841979 -93808317 + L1M5 LINE L1 4407 4612 -1534 6 1140 265 213 128 0 chrX 72842067 72842161 -93808135 + L1MC LINE L1 4734 4839 -1307 6 1140 451 255 195 0 chrX 72842325 72842474 -93807822 + B3A SINE B2 5 182 -16 6 1140 189 107 0 0 chrX 72842484 72842512 -93807784 + (TTA)n Simple_repeat Simple_repeat 2 29 0 6 1140 23 0 0 0 chrX 72842756 72842779 -93807517 + AT_rich Low_complexity Low_complexity 1 23 0 6 1140 517 294 32 21 chrX 72843161 72843349 -93806947 + Lx8 LINE L1 7034 7223 -250 6 1140 893 147 44 13 chrX 72843398 72843557 -93806739 + URR1B DNA MER1_type 60 223 -2 6 1140 22 0 0 0 chrX 72843660 72843682 -93806614 + AT_rich Low_complexity Low_complexity 1 22 0 6 1140 494 280 56 7 chrX 72843703 72843847 -93806449 + RMER15 LTR ERVL 425 575 0 6 1140 3499 23 2 0 chrX 72843933 72844328 -93805968 + MTA_Mm LTR MaLR 1 396 0 6 1140 401 353 0 40 chrX 72844374 72844548 -93805748 + RMER15-int LTR ERVL 155 321 -4678 6 1140 444 183 140 0 chrX 72844556 72844649 -93805647 + RMER21B LTR ERV1 43 148 -694 6 1140 592 186 168 70 chrX 72844742 72844927 -93805369 + RMER21B LTR ERV1 365 567 -275 6 1140 953 310 43 45 chrX 72845117 72845633 -93804663 + RMER15-int LTR ERVL 310 824 -4175 6 1140 509 277 45 6 chrX 72845641 72845797 -93804499 + RMER15-int LTR ERVL 943 1104 -3895 6 1140 266 287 63 11 chrX 72845898 72845993 -93804303 + B1F SINE Alu 1 100 -49 6 1140 411 300 93 0 chrX 72846050 72846307 -93803989 + L1M2 LINE L1 5072 5352 -791 6 1140 2056 258 71 37 chrX 72846315 72846988 -93803308 + RMER15-int LTR ERVL 1093 1788 -3211 6 1140 830 137 50 0 chrX 72847109 72847248 -93803048 + B1_Mus1 SINE Alu 2 147 -1 6 1140 566 121 78 7 chrX 72847467 72847609 -93802687 + Lx9 LINE L1 7493 7644 0 6 1140 754 210 8 0 chrX 72847659 72847783 -93802513 + B3 SINE B2 6 130 -86 6 1140 26 50 0 0 chrX 72848344 72848384 -93801912 + AT_rich Low_complexity Low_complexity 1 40 0 6 1140 289 252 0 66 chrX 72848905 72849011 -93801285 + CT-rich Low_complexity Low_complexity 3 101 0 6 1140 4413 35 2 0 chrX 72849375 72849896 -93800400 + L1Md_F2 LINE L1 6058 6579 -3 6 1140 1492 272 112 29 chrX 72849950 72850817 -93799479 + L1MB7 LINE L1 5210 6150 -34 6 1140 254 374 43 5 chrX 72850972 72851179 -93799117 - L1MC LINE L1 -2209 5673 5459 6 1140 22 103 0 0 chrX 72851278 72851356 -93798940 + AT_rich Low_complexity Low_complexity 1 78 0 6 1140 297 387 23 29 chrX 72851728 72852071 -93798225 + L2 LINE L2 914 1254 -2165 6 1140 3923 61 101 0 chrX 72852160 72852684 -93797612 - Lx3_Mus LINE L1 0 7009 6433 6 1140 297 0 0 0 chrX 72853446 72853479 -93796817 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1140 536 291 65 45 chrX 72853801 72853956 -93796340 - RSINE1 SINE B4 -6 159 2 6 1140 25 31 0 0 chrX 72854291 72854323 -93795973 + AT_rich Low_complexity Low_complexity 1 32 0 6 1140 326 338 78 0 chrX 72854710 72854864 -93795432 - MIRb SINE MIR -6 262 97 6 1140 186 71 0 0 chrX 72854864 72854892 -93795404 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 6 1140 799 49 0 0 chrX 72854893 72854995 -93795301 - B1_Mus1 SINE Alu -13 135 34 6 1140 2698 26 2 243 chrX 72855096 72855610 -93794686 + RLTR10 LTR ERVK 1 390 0 6 1140 7435 29 4 1 chrX 72855619 72856531 -93793765 + RLTR10-int LTR ERVK 39 953 -1034 6 1140 8446 17 0 0 chrX 72856625 72857620 -93792676 + RLTR10-int LTR ERVK 990 1984 -3 6 1140 2859 26 2 187 chrX 72857622 72858098 -93792198 + RLTR10 LTR ERVK 1 388 -2 6 1140 2042 42 4 0 chrX 72858109 72858372 -93791924 + RLTR10-int LTR ERVK 40 303 -1684 6 1140 626 265 32 61 chrX 72858879 72859094 -93791202 + L1MA5 LINE L1 5965 6173 -127 6 1140 271 325 0 13 chrX 72859094 72859172 -93791124 + ID4 SINE ID 4 80 -3 6 1140 626 265 32 61 chrX 72859172 72859298 -93790998 + L1MA5 LINE L1 6174 6296 -4 6 1140 300 332 140 23 chrX 72860479 72860744 -93789552 - L1MD2 LINE L1 -15 6344 6049 6 1140 479 282 181 0 chrX 72860830 72861215 -93789081 - L1MD2 LINE L1 -402 5957 5514 6 1140 2116 151 11 50 chrX 72861225 72861684 -93788612 - RMER10A LTR ERVL 0 442 2 6 1140 241 306 19 75 chrX 72861844 72861950 -93788346 - ORR1E LTR MaLR -183 176 77 6 1140 4449 192 87 45 chrX 72862014 72863096 -93787200 - Lx7 LINE L1 -15 7681 6555 6 1140 349 175 0 0 chrX 72863097 72863154 -93787142 - Lx7 LINE L1 -1255 6441 6385 6 1140 2411 190 77 32 chrX 72863154 72863190 -93787106 - Lx7 LINE L1 -1467 6229 6188 6 1140 261 0 0 0 chrX 72863190 72863219 -93787077 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1140 3607 182 51 42 chrX 72863219 72864338 -93785958 - Lx7 LINE L1 -1509 6187 5048 6 1140 22 56 0 0 chrX 72864338 72864374 -93785922 + AT_rich Low_complexity Low_complexity 1 36 0 6 1140 237 237 40 30 chrX 72864376 72864476 -93785820 - Lx9 LINE L1 -18 7626 7526 6 1140 288 111 0 0 chrX 72864477 72864522 -93785774 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1140 578 62 0 0 chrX 72864537 72864616 -93785680 + RMER19B LTR ERVK 1 79 -823 6 1140 3978 27 12 14 chrX 72864616 72865096 -93785200 + MT2_Mm LTR ERVL 1 486 -7 6 1140 2791 39 6 177 chrX 72865096 72865566 -93784730 + RLTR10 LTR ERVK 1 390 0 6 1140 3978 27 12 14 chrX 72865566 72865579 -93784717 + MT2_Mm LTR ERVL 487 493 0 6 1140 9236 33 2 1 chrX 72865581 72866678 -93783618 + MTA_Mm-int LTR MaLR 1 1098 0 6 1140 3445 20 5 0 chrX 72866678 72867072 -93783224 + MTA_Mm LTR MaLR 1 396 0 6 1140 4081 174 109 13 chrX 72867072 72867882 -93782414 + RMER19B LTR ERVK 49 902 0 6 1140 726 236 140 5 chrX 72867882 72868082 -93782214 - Lx9 LINE L1 -1036 6608 6382 6 1140 2359 179 9 66 chrX 72868083 72868626 -93781670 - Lx2B LINE L1 -3 6997 6486 6 1140 3379 140 31 0 chrX 72868609 72869193 -93781103 - L1_Mur2 LINE L1 -7 5870 5269 6 1140 6555 133 34 12 chrX 72869208 72869740 -93780556 + L1_Mur2 LINE L1 4044 4584 -1293 6 1140 2736 46 17 0 chrX 72869740 72870085 -93780211 - L1Md_F2 LINE L1 -14 6568 6218 6 1140 6555 133 34 12 chrX 72870085 72870709 -93779587 + L1_Mur2 LINE L1 4585 5225 -652 6 1140 353 80 67 11 chrX 72870709 72870798 -93779498 + (TATAA)n Simple_repeat Simple_repeat 4 97 0 6 1140 2136 93 0 0 chrX 72870798 72871088 -93779208 + L1_Mus1 LINE L1 6278 6567 0 6 1140 223 218 18 0 chrX 72871168 72871223 -93779073 + (TA)n Simple_repeat Simple_repeat 1 56 0 6 142 33048 69 1 3 chrX 72871387 72877827 -93772469 - L1Md_F2 LINE L1 -4 6578 152 6 1141 1875 191 30 16 chrX 72877850 72878332 -93771964 - Lx9 LINE L1 -1676 5968 5447 6 1141 9267 84 25 5 chrX 72878335 72880649 -93769647 - Lx3_Mus LINE L1 -5 7004 4652 6 1141 14326 120 36 19 chrX 72880649 72881843 -93768453 + Lx3_Mus LINE L1 3365 4599 -1284 6 1141 1002 107 0 0 chrX 72881843 72881983 -93768313 + B1_Mm SINE Alu 2 141 -6 6 1141 209 33 33 0 chrX 72881986 72882016 -93768280 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1141 14326 120 36 19 chrX 72882016 72882679 -93767617 + L1_Mus3 LINE L1 4600 5284 -599 6 1141 1304 154 67 0 chrX 72882679 72882919 -93767377 + L1_Mus3 LINE L1 6375 6630 -8 6 1141 14326 99 20 7 chrX 72882919 72884259 -93766037 + L1_Mus3 LINE L1 5285 6624 -14 6 1141 812 74 0 0 chrX 72884250 72884372 -93765924 - Lx3_Mus LINE L1 -1212 4674 4553 6 1141 3690 88 12 3 chrX 72885427 72885997 -93764299 - Lx3_Mus LINE L1 -1387 4499 3925 6 1141 14029 59 5 1 chrX 72886008 72888623 -93761673 - L1Md_F2 LINE L1 -14 6568 3942 6 1141 1597 139 4 8 chrX 72888609 72888855 -93761441 + L1Md_F LINE L1 294 538 -5981 6 1141 740 235 46 45 chrX 72888858 72889663 -93760633 - SYNREP_MM Satellite Satellite 0 805 1 6 1141 1283 260 15 18 chrX 72889685 72891547 -93758749 - GSAT_MM Satellite Satellite -71 1856 1 6 1141 4941 64 0 0 chrX 72891597 72892221 -93758075 + L1Md_T LINE L1 5959 6582 0 6 1141 1282 234 24 29 chrX 72892257 72893405 -93756891 - GSAT_MM Satellite Satellite -73 1142 1 6 1141 1374 253 13 21 chrX 72893356 72897442 -93752854 - GSAT_MM Satellite Satellite -73 4052 1 6 1141 1223 253 16 15 chrX 72897455 72898719 -93751577 - GSAT_MM Satellite Satellite -73 1265 1 6 1141 4941 64 0 0 chrX 72898769 72899393 -93750903 + L1Md_T LINE L1 5959 6582 0 6 1141 1166 228 33 23 chrX 72899429 72900279 -93750017 - GSAT_MM Satellite Satellite -73 858 1 6 1141 1222 260 13 18 chrX 72900164 72902454 -93747842 - GSAT_MM Satellite Satellite -73 2277 1 6 1141 1172 227 30 23 chrX 72902391 72903323 -93746973 + GSAT_MM Satellite Satellite 1 939 -20 6 1141 4941 64 0 0 chrX 72903359 72903983 -93746313 - L1Md_T LINE L1 0 6582 5959 6 1141 1223 252 16 16 chrX 72904033 72905299 -93744997 + GSAT_MM Satellite Satellite 1 1265 0 6 1141 1374 248 11 23 chrX 72905312 72909396 -93740900 + GSAT_MM Satellite Satellite 1 4038 0 6 1141 1357 247 8 25 chrX 72909472 72912683 -93737613 + GSAT_MM Satellite Satellite 1 3158 0 6 1141 421 270 26 13 chrX 72912523 72912752 -93737544 + SYNREP_MM Satellite Satellite 23 254 -12 6 1141 1262 262 11 16 chrX 72912747 72913319 -93736977 + GSAT_MM Satellite Satellite 1 521 -7 6 1141 1276 279 15 27 chrX 72913327 72914566 -93735730 + GSAT_MM Satellite Satellite 1 1223 -6 6 1141 771 289 29 31 chrX 72914502 72915573 -93734723 + GSAT_MM Satellite Satellite 1 946 -38 6 1141 1002 273 33 37 chrX 72915665 72916807 -93733489 + GSAT_MM Satellite Satellite 1 1055 -3 6 1141 939 263 23 36 chrX 72916791 72917881 -93732415 + GSAT_MM Satellite Satellite 1 1075 0 6 1141 299 346 6 6 chrX 72917969 72918132 -93732164 + (CAGA)n Simple_repeat Simple_repeat 3 165 0 6 1141 224 234 0 0 chrX 72918179 72918226 -93732070 + (CAGA)n Simple_repeat Simple_repeat 3 49 0 6 1141 191 244 13 0 chrX 72918261 72918339 -93731957 + (CAGA)n Simple_repeat Simple_repeat 3 81 0 6 1141 294 95 0 0 chrX 72918491 72918533 -93731763 + (CAGAGA)n Simple_repeat Simple_repeat 5 46 0 7 1141 203 171 0 0 chrX 72919032 72919067 -93731229 + GA-rich Low_complexity Low_complexity 2 36 0 7 1141 198 0 0 0 chrX 72920056 72920078 -93730218 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 7 1141 650 82 0 10 chrX 72920162 72920261 -93730035 + (GGAA)n Simple_repeat Simple_repeat 3 100 0 7 1141 194 0 39 0 chrX 72920308 72920334 -93729962 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1141 3316 59 122 11 chrX 72920616 72921077 -93729219 + RLTR1B LTR ERV1 1 512 0 7 1141 276 112 0 119 chrX 72921108 72921209 -93729087 + A-rich Low_complexity Low_complexity 1 89 0 7 1141 22 0 0 0 chrX 72921336 72921358 -93728938 + AT_rich Low_complexity Low_complexity 1 22 0 7 1141 899 264 75 92 chrX 72921776 72922176 -93728120 - RLTR9C LTR ERVK 0 393 1 7 1141 264 59 0 0 chrX 72922317 72922351 -93727945 + (TAA)n Simple_repeat Simple_repeat 1 34 0 7 1141 830 149 26 29 chrX 72922355 72922551 -93727745 - RLTR9E LTR ERVK 0 409 216 7 1141 2652 110 56 0 chrX 72922551 72923179 -93727117 - L1Md_A LINE L1 -2296 1618 938 7 1141 561 173 9 9 chrX 72923179 72923290 -93727006 + B1_Mus2 SINE Alu 37 147 0 7 1141 254 143 20 0 chrX 72923296 72923345 -93726951 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 7 1141 1783 104 0 11 chrX 72923345 72923607 -93726689 - RLTR9E LTR ERVK -150 259 1 7 1141 336 220 64 18 chrX 72923670 72923932 -93726364 + (TTATA)n Simple_repeat Simple_repeat 1 274 0 7 1141 22 35 0 0 chrX 72923984 72924013 -93726283 + AT_rich Low_complexity Low_complexity 1 29 0 7 1141 450 349 7 20 chrX 72924047 72924196 -93726100 - B3 SINE B2 -10 206 60 7 1141 513 187 25 13 chrX 72924709 72924866 -93725430 + (CATATA)n Simple_repeat Simple_repeat 2 160 0 7 1141 322 196 21 0 chrX 72924886 72924983 -93725313 + (TA)n Simple_repeat Simple_repeat 1 99 0 7 1141 643 207 6 11 chrX 72924999 72925180 -93725116 + (TA)n Simple_repeat Simple_repeat 1 180 0 7 1141 342 195 25 25 chrX 72925145 72925308 -93724988 + (CATATA)n Simple_repeat Simple_repeat 4 166 0 7 1141 25 65 0 0 chrX 72925424 72925470 -93724826 + AT_rich Low_complexity Low_complexity 1 46 0 7 1141 239 131 0 47 chrX 72925561 72925625 -93724671 + A-rich Low_complexity Low_complexity 1 61 0 7 1141 8165 33 7 0 chrX 72927065 72928036 -93722260 + RLTR13A3 LTR ERVK 1 978 0 7 1141 297 70 17 34 chrX 72928181 72928240 -93722056 + (CAAAA)n Simple_repeat Simple_repeat 4 61 0 7 1141 359 306 106 60 chrX 72928880 72929216 -93721080 - L1Md_F LINE L1 -5777 742 251 7 1141 10383 130 17 48 chrX 72929214 72930275 -93720021 + L1_Mus2 LINE L1 4105 5173 -710 7 1141 1081 84 7 0 chrX 72930275 72930417 -93719879 + B1_Mus2 SINE Alu 5 147 0 7 1141 10383 130 17 48 chrX 72930417 72930490 -93719806 + L1_Mus2 LINE L1 5174 5176 -707 7 1141 477 0 0 0 chrX 72930490 72930543 -93719753 + (GA)n Simple_repeat Simple_repeat 2 54 0 7 1141 10383 108 19 17 chrX 72930543 72931921 -93718375 + L1_Mus2 LINE L1 5177 6565 -1 7 1141 1181 203 21 3 chrX 72931925 72932216 -93718080 + L1_Mur3 LINE L1 2992 3287 -2593 7 1141 1235 195 31 38 chrX 72932235 72932523 -93717773 + Lx7 LINE L1 5619 5904 -1792 7 1141 2113 198 15 17 chrX 72932526 72932937 -93717359 + MTC LTR MaLR 5 414 -7 7 1141 385 311 52 44 chrX 72932946 72933195 -93717101 + Lx6 LINE L1 5905 6155 -1305 7 1141 345 239 8 34 chrX 72933178 72933295 -93717001 + Lx6 LINE L1 7332 7445 -15 7 1141 1302 219 74 29 chrX 72933680 72933990 -93716306 + RLTR21 LTR ERVK 1 324 -1248 7 1141 2449 209 32 44 chrX 72934032 72934694 -93715602 + RLTR21 LTR ERVK 551 1204 -368 7 1141 194 0 39 0 chrX 72934748 72934774 -93715522 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 7 1141 525 210 98 35 chrX 72934779 72934922 -93715374 - ORR1B2 LTR MaLR -215 152 1 7 1141 240 167 0 0 chrX 72934957 72935005 -93715291 + GA-rich Low_complexity Low_complexity 1 48 0 7 1141 249 135 0 0 chrX 72935030 72935082 -93715214 + (CATA)n Simple_repeat Simple_repeat 1 52 0 7 1141 246 105 0 0 chrX 72935146 72935184 -93715112 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1141 237 184 20 0 chrX 72935817 72935866 -93714430 + (CAA)n Simple_repeat Simple_repeat 2 51 0 7 1141 31206 98 6 11 chrX 72935882 72941111 -93709185 + L1Md_F2 LINE L1 423 5584 -299 7 1141 7773 57 7 3 chrX 72941113 72942092 -93708204 + L1Md_F2 LINE L1 5587 6569 -13 7 1141 1045 151 11 6 chrX 72945938 72946118 -93704178 + B2_Mm2 SINE B2 1 181 -14 7 1141 701 53 11 0 chrX 72946118 72946212 -93704084 + (GGAA)n Simple_repeat Simple_repeat 3 97 0 7 1141 2375 101 3 3 chrX 72947277 72947586 -93702710 + RLTR27 LTR ERVK 1 309 0 7 1141 326 111 6 0 chrX 72947611 72947664 -93702632 + RLTR10-int LTR ERVK 163 267 -7314 7 1141 686 222 45 55 chrX 72947696 72947896 -93702400 + RLTR10-int LTR ERVK 655 852 -1135 7 1141 224 229 0 62 chrX 72947897 72947962 -93702334 + GA-rich Low_complexity Low_complexity 5 65 0 7 1141 2390 320 29 33 chrX 72948275 72950028 -93700268 + MMERVK10C-int LTR ERVK 705 2898 -4683 7 1141 357 118 0 0 chrX 72950031 72950082 -93700214 - RLTR27 LTR ERVK -256 53 3 7 1141 1363 173 4 23 chrX 72950084 72950350 -93699946 - MMERVK10C-int LTR ERVK 0 7581 7321 7 1141 317 325 18 24 chrX 72950484 72950648 -93699648 - MMERVK10C-int LTR ERVK -512 7069 6907 7 1141 1671 300 19 62 chrX 72951138 72951364 -93698932 - MMERVK10C-int LTR ERVK -2105 5476 5260 7 1141 1217 68 0 0 chrX 72951364 72951511 -93698785 + B1_Mm SINE Alu 1 147 0 7 1141 1671 300 19 62 chrX 72951511 72951539 -93698757 - MMERVK10C-int LTR ERVK -2322 5259 5252 7 1141 324 0 0 0 chrX 72951539 72951575 -93698721 + (GA)n Simple_repeat Simple_repeat 2 37 0 7 1141 1671 300 19 62 chrX 72951575 72952240 -93698056 - MMERVK10C-int LTR ERVK -2330 5251 4597 7 1141 1837 243 10 8 chrX 72952306 72952799 -93697497 - IAP-d-int LTR ERVK -3499 3043 2550 7 1141 325 71 0 0 chrX 72952850 72952892 -93697404 + RLTR27 LTR ERVK 268 309 0 7 1141 289 95 32 0 chrX 72956723 72956786 -93693510 + (TTTTTG)n Simple_repeat Simple_repeat 2 66 0 7 1141 1151 114 0 6 chrX 72957577 72957745 -93692551 - B2_Mm2 SINE B2 -27 168 2 7 1141 33667 77 3 4 chrX 72958183 72964449 -93685847 + L1_Mus1 LINE L1 220 6570 0 7 1141 1675 165 44 0 chrX 72964459 72964867 -93685429 + L1_Mur1 LINE L1 1172 1601 -2311 7 1141 4823 116 35 6 chrX 72964859 72965706 -93684590 + L1_Mur1 LINE L1 2452 3323 -589 7 1141 1477 186 18 14 chrX 72965706 72965990 -93684306 + Lx2B LINE L1 6709 6993 -7 7 1141 255 296 36 24 chrX 72967349 72967432 -93682864 + PB1D10 SINE Alu 21 104 -13 7 1141 4143 40 2 8 chrX 72967459 72968005 -93682291 + L1Md_T LINE L1 6089 6582 0 7 1141 390 21 0 0 chrX 72968082 72968129 -93682167 + (TAGA)n Simple_repeat Simple_repeat 1 47 0 7 1141 2621 187 102 2 chrX 72968159 72968669 -93681627 + RMER19B LTR ERVK 342 902 0 7 1141 210 105 0 0 chrX 72970250 72970288 -93680008 + (T)n Simple_repeat Simple_repeat 1 38 0 7 1141 1029 95 0 0 chrX 72970516 72970653 -93679643 + B1_Mus1 SINE Alu 2 138 -10 7 1141 396 0 0 0 chrX 72970653 72970697 -93679599 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 7 1141 718 191 28 14 chrX 72971452 72971595 -93678701 - B1_Mur4 SINE Alu -5 145 1 7 1141 314 302 0 79 chrX 72971748 72971874 -93678422 - MamRep605 Unknown Unknown -328 548 433 7 1141 233 274 0 0 chrX 72972052 72972103 -93678193 + tRNA-Ala-GCY_ tRNA tRNA 1 51 -24 7 1141 2439 177 135 4 chrX 72972410 72972914 -93677382 + RMER19B LTR ERVK 333 902 0 7 1141 246 32 0 0 chrX 72974208 72974239 -93676057 + (GA)n Simple_repeat Simple_repeat 1 31 0 7 1141 441 0 0 0 chrX 72974239 72974287 -93676009 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 1141 432 0 0 0 chrX 72974800 72974848 -93675448 + (TC)n Simple_repeat Simple_repeat 1 48 0 7 1141 477 62 0 0 chrX 72975528 72975593 -93674703 + (TG)n Simple_repeat Simple_repeat 1 65 0 7 1141 378 61 0 0 chrX 72977126 72977175 -93673121 + (CCTA)n Simple_repeat Simple_repeat 1 49 0 7 1141 263 113 19 0 chrX 72977856 72977909 -93672387 + (GA)n Simple_repeat Simple_repeat 2 55 0 7 1141 612 0 0 0 chrX 72978631 72978699 -93671597 + (TC)n Simple_repeat Simple_repeat 1 68 0 7 1141 657 38 0 0 chrX 72979586 72979666 -93670630 + (TC)n Simple_repeat Simple_repeat 1 80 0 7 1141 276 53 0 0 chrX 72979666 72979703 -93670593 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1141 570 54 0 0 chrX 72979824 72979898 -93670398 + (TC)n Simple_repeat Simple_repeat 1 74 0 7 1141 360 0 0 0 chrX 72979898 72979937 -93670359 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 1141 417 39 0 0 chrX 72980619 72980670 -93669626 + (TG)n Simple_repeat Simple_repeat 1 51 0 7 1141 219 69 0 0 chrX 72982203 72982232 -93668064 + (CCTA)n Simple_repeat Simple_repeat 1 29 0 7 1141 287 121 17 0 chrX 72982913 72982971 -93667325 + (GA)n Simple_repeat Simple_repeat 2 60 0 7 1141 489 17 0 0 chrX 72983641 72983699 -93666597 + (TC)n Simple_repeat Simple_repeat 1 58 0 7 1141 240 59 0 0 chrX 72983699 72983732 -93666564 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 1141 447 68 0 0 chrX 72984604 72984663 -93665633 + (TC)n Simple_repeat Simple_repeat 2 60 0 7 1141 270 0 0 0 chrX 72984663 72984693 -93665603 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 1141 447 68 0 0 chrX 72985572 72985631 -93664665 + (TC)n Simple_repeat Simple_repeat 2 60 0 7 1141 270 0 0 0 chrX 72985631 72985661 -93664635 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 1141 363 44 0 0 chrX 72986344 72986389 -93663907 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 1141 414 57 0 0 chrX 72987922 72987975 -93662321 + (CCTA)n Simple_repeat Simple_repeat 1 53 0 7 1141 263 113 19 0 chrX 72988656 72988709 -93661587 + (GA)n Simple_repeat Simple_repeat 2 55 0 7 1141 309 26 0 0 chrX 72989429 72989467 -93660829 + (TC)n Simple_repeat Simple_repeat 1 38 0 7 1141 384 40 0 0 chrX 72989467 72989516 -93660780 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 1141 627 39 0 0 chrX 72990391 72990469 -93659827 + (TC)n Simple_repeat Simple_repeat 1 78 0 7 1141 360 0 0 0 chrX 72990469 72990508 -93659788 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 1141 453 36 0 0 chrX 72991195 72991250 -93659046 + (TG)n Simple_repeat Simple_repeat 1 55 0 7 1141 348 24 0 0 chrX 72992787 72992828 -93657468 + (CCTA)n Simple_repeat Simple_repeat 1 41 0 7 1141 263 113 19 0 chrX 72993509 72993562 -93656734 + (GA)n Simple_repeat Simple_repeat 2 55 0 7 1141 309 26 0 0 chrX 72994282 72994320 -93655976 + (TC)n Simple_repeat Simple_repeat 1 38 0 7 1141 384 40 0 0 chrX 72994320 72994369 -93655927 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 1141 627 39 0 0 chrX 72995244 72995322 -93654974 + (TC)n Simple_repeat Simple_repeat 1 78 0 7 1141 360 0 0 0 chrX 72995322 72995361 -93654935 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 1141 471 35 0 0 chrX 72996041 72996098 -93654198 + (TG)n Simple_repeat Simple_repeat 1 57 0 8 1141 186 103 0 0 chrX 72997635 72997664 -93652632 + (CCTA)n Simple_repeat Simple_repeat 1 29 0 8 1141 252 158 0 0 chrX 72998343 72998400 -93651896 + GA-rich Low_complexity Low_complexity 2 58 0 8 1141 522 43 0 0 chrX 72999120 72999189 -93651107 + (TC)n Simple_repeat Simple_repeat 2 70 0 8 1141 486 46 0 0 chrX 72999878 72999943 -93650353 + (TG)n Simple_repeat Simple_repeat 1 65 0 8 1141 258 81 0 0 chrX 73001476 73001513 -93648783 + (CCTA)n Simple_repeat Simple_repeat 1 37 0 1 1141 204 97 0 0 chrX 73002187 73002218 -93648078 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 1141 418 0 35 17 chrX 73002223 73002281 -93648015 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 3 1141 420 37 0 0 chrX 73003002 73003056 -93647240 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 1141 312 48 0 0 chrX 73003056 73003097 -93647199 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1141 414 53 0 0 chrX 73003756 73003813 -93646483 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 1141 432 0 0 0 chrX 73004000 73004048 -93646248 + (TC)n Simple_repeat Simple_repeat 1 48 0 7 1141 342 0 0 0 chrX 73004048 73004085 -93646211 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 1141 477 47 0 0 chrX 73004752 73004816 -93645480 + (TG)n Simple_repeat Simple_repeat 2 65 0 9 1141 378 61 0 0 chrX 73006340 73006389 -93643907 + (CCTA)n Simple_repeat Simple_repeat 1 49 0 1 142 347 157 11 0 chrX 73007073 73007162 -93643134 + GA-rich Low_complexity Low_complexity 2 91 0 1 1142 207 167 0 0 chrX 73008243 73008279 -93642017 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1142 778 155 0 51 chrX 73009102 73009258 -93641038 + B1_Mur4 SINE Alu 3 150 0 1 1142 201 139 0 44 chrX 73009258 73009303 -93640993 + A-rich Low_complexity Low_complexity 3 45 0 1 1142 186 133 0 0 chrX 73009379 73009409 -93640887 + (TCTG)n Simple_repeat Simple_repeat 4 33 0 1 1142 791 245 19 94 chrX 73010277 73010489 -93639807 - B3 SINE B2 -19 197 2 1 1142 387 262 30 38 chrX 73010489 73010620 -93639676 - Lx8 LINE L1 -1075 6398 6269 1 1142 247 308 13 119 chrX 73010621 73010772 -93639524 - ID_B1 SINE B4 0 224 90 1 1142 521 256 15 8 chrX 73010643 73010773 -93639523 - B1_Mur4 SINE Alu -11 139 9 1 1142 195 114 0 0 chrX 73010791 73010826 -93639470 + (TGGA)n Simple_repeat Simple_repeat 3 37 0 2 1142 348 24 0 0 chrX 73011026 73011067 -93639229 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1142 5091 47 0 8 chrX 73011184 73011806 -93638490 - L1_Mus1 LINE L1 0 6567 5951 2 1142 7772 88 3 1 chrX 73011806 73012851 -93637445 - L1_Mm LINE L1 -143 5740 4694 2 1142 246 233 26 40 chrX 73013050 73013126 -93637170 - PB1D10 SINE Alu 0 117 43 2 1142 381 242 74 45 chrX 73013338 73013456 -93636840 - PB1D9 SINE Alu -3 117 1 2 1142 509 212 195 0 chrX 73014241 73014359 -93635937 + B1_Mus1 SINE Alu 1 141 -7 2 1142 968 124 0 0 chrX 73014368 73014505 -93635791 + B1_Mus1 SINE Alu 1 137 -11 2 1142 999 68 0 0 chrX 73014505 73014637 -93635659 + (GAAA)n Simple_repeat Simple_repeat 3 134 0 2 1142 3452 122 44 25 chrX 73014637 73015207 -93635089 + Lx2 LINE L1 6392 6972 -25 2 1142 816 95 79 0 chrX 73015207 73015333 -93634963 + B2_Mm2 SINE B2 1 136 -59 3 1142 3572 102 36 0 chrX 73015333 73015893 -93634403 - RLTR13D1 LTR ERVK 0 806 227 3 1142 2811 134 35 40 chrX 73015866 73016412 -93633884 - RLTR13D1 LTR ERVK -359 543 1 3 1142 283 101 26 104 chrX 73016412 73016472 -93633824 + B2_Mm1a SINE B2 140 193 0 3 1142 898 134 78 63 chrX 73016489 73016680 -93633616 + B2_Mm2 SINE B2 2 195 0 3 1142 27 0 0 0 chrX 73016762 73016789 -93633507 + AT_rich Low_complexity Low_complexity 1 27 0 3 1142 260 284 12 24 chrX 73016818 73016901 -93633395 + ID4_ SINE ID 2 83 0 3 1142 828 290 0 0 chrX 73016923 73017130 -93633166 + B3 SINE B2 1 207 -9 3 1142 222 37 0 0 chrX 73017130 73017157 -93633139 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1142 472 250 16 24 chrX 73017173 73017296 -93633000 + B3A SINE B2 1 122 -76 3 1142 6296 135 53 18 chrX 73017296 73018565 -93631731 - Lx4A LINE L1 -376 6682 5383 3 1142 630 192 8 0 chrX 73018565 73018690 -93631606 - B1_Mur3 SINE Alu -5 144 19 4 1142 207 286 0 28 chrX 73018696 73018768 -93631528 + CT-rich Low_complexity Low_complexity 1 70 0 4 1142 458 257 96 34 chrX 73018806 73019015 -93631281 - RMER5 LTR ERV1 -274 260 39 4 1142 351 0 0 0 chrX 73019050 73019089 -93631207 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1142 700 237 49 169 chrX 73019567 73019993 -93630303 - RMER17C LTR ERVK -32 378 4 4 1142 223 222 19 0 chrX 73020130 73020184 -93630112 + ID4_ SINE ID 25 79 -4 4 1142 275 325 49 24 chrX 73020483 73020606 -93629690 - B1F SINE Alu -4 145 20 4 1142 226 311 0 0 chrX 73020640 73020714 -93629582 - MER74A LTR ERVL -31 527 454 4 1142 581 304 139 15 chrX 73020747 73021078 -93629218 - MER74A LTR ERVL -184 374 3 4 1142 221 271 0 48 chrX 73021222 73021284 -93629012 - ID SINE ID -142 82 24 4 1142 418 196 50 20 chrX 73021556 73021655 -93628641 - RMER1C Other Other -337 1005 904 4 1142 1187 179 70 100 chrX 73021646 73021769 -93628527 + RMER1C Other Other 1010 1113 -229 5 1142 1194 54 0 0 chrX 73021769 73021916 -93628380 - B1_Mus1 SINE Alu -1 147 1 5 1142 1187 179 70 100 chrX 73021916 73022133 -93628163 + RMER1C Other Other 1114 1340 -2 5 1142 579 258 80 11 chrX 73022252 73022440 -93627856 + B3 SINE B2 2 202 -14 5 1142 21 36 0 0 chrX 73022615 73022643 -93627653 + AT_rich Low_complexity Low_complexity 1 28 0 5 1142 832 296 0 5 chrX 73022653 73022860 -93627436 + B3 SINE B2 1 206 -10 5 1142 868 244 10 0 chrX 73022919 73023124 -93627172 - B3 SINE B2 -6 210 4 5 1142 2140 161 54 59 chrX 73023124 73023646 -93626650 + RLTR24 LTR ERV1 1 519 -10 5 1142 370 271 156 49 chrX 73023776 73024001 -93626295 + L1MC1 LINE L1 5860 6108 -225 5 1142 214 316 13 0 chrX 73024015 73024094 -93626202 + ID4_ SINE ID 2 81 -2 5 1142 200 98 23 47 chrX 73024095 73024138 -93626158 + A-rich Low_complexity Low_complexity 3 44 0 5 1142 262 270 33 22 chrX 73024953 73025044 -93625252 - RLTR23 LTR ERV1 0 430 339 6 1142 1344 241 107 28 chrX 73025597 73025693 -93624603 - RLTR20D LTR ERVK 0 568 477 6 1142 663 13 0 0 chrX 73025693 73025769 -93624527 + (CA)n Simple_repeat Simple_repeat 2 77 0 6 1142 1344 241 107 28 chrX 73025769 73025957 -93624339 - RLTR20D LTR ERVK -92 476 274 6 1142 3493 88 0 14 chrX 73025957 73026442 -93623854 - L1Md_F2 LINE L1 0 6582 6105 6 1142 1344 241 107 28 chrX 73026442 73026625 -93623671 - RLTR20D LTR ERVK -295 273 66 6 1142 858 42 8 0 chrX 73026625 73026743 -93623553 + B1_Mm SINE Alu 28 146 -1 6 1142 315 0 0 0 chrX 73026743 73026778 -93623518 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 6 1142 662 67 371 0 chrX 73026797 73026902 -93623394 + B1_Mus1 SINE Alu 5 148 0 6 1142 195 69 0 0 chrX 73026902 73026931 -93623365 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1142 342 98 113 16 chrX 73026932 73026994 -93623302 - RLTR20D LTR ERVK -500 68 1 6 1142 1786 216 14 17 chrX 73027061 73027480 -93622816 - MTD LTR MaLR -1 418 1 6 1142 247 341 138 8 chrX 73027494 73027624 -93622672 - ID_B1 SINE B4 0 224 78 6 1142 233 226 0 101 chrX 73027746 73027815 -93622481 - ID_B1 SINE B4 -2 222 161 7 1142 563 158 207 8 chrX 73027862 73027983 -93622313 - B1_Mus2 SINE Alu -2 145 1 7 1142 339 301 132 6 chrX 73028053 73028227 -93622069 - B4 SINE B4 -4 288 93 7 1142 210 301 116 21 chrX 73028228 73028323 -93621973 - B1F SINE Alu -3 146 43 7 1142 1159 58 0 0 chrX 73028389 73028526 -93621770 + B1_Mus2 SINE Alu 3 139 -8 7 1142 255 31 0 0 chrX 73028526 73028558 -93621738 + (CAA)n Simple_repeat Simple_repeat 2 33 0 7 1142 642 294 48 0 chrX 73028561 73028748 -93621548 - ID_B1 SINE B4 -16 208 13 7 1142 350 335 99 12 chrX 73028837 73029000 -93621296 - B4A SINE B4 -2 290 113 7 1142 946 237 61 76 chrX 73029000 73029329 -93620967 - RLTR23 LTR ERV1 0 430 107 7 1142 283 235 29 0 chrX 73029390 73029458 -93620838 + B1F2 SINE Alu 9 78 -71 7 1142 333 108 355 0 chrX 73029768 73029878 -93620418 - B2_Mm2 SINE B2 0 195 47 8 1142 1328 90 23 0 chrX 73029906 73030083 -93620213 - B2_Mm2 SINE B2 -14 181 1 8 1142 311 189 95 0 chrX 73030695 73030769 -93619527 + PB1D7 SINE Alu 40 120 0 8 1142 527 269 63 7 chrX 73030775 73030917 -93619379 + B3A SINE B2 4 153 -45 8 1142 1237 92 11 31 chrX 73032304 73032495 -93617801 - B2_Mm2 SINE B2 -8 187 1 8 1142 4692 61 0 0 chrX 73032525 73033118 -93617178 - L1_Mm LINE L1 -1073 4810 4218 8 1142 2011 53 0 0 chrX 73033107 73033354 -93616942 + L1_Mm LINE L1 4679 4925 -958 8 1142 1413 103 0 18 chrX 73033354 73033572 -93616724 + L1Md_F2 LINE L1 6357 6570 -12 8 1142 707 209 221 0 chrX 73033584 73033756 -93616540 - B3 SINE B2 -5 211 2 8 1142 270 259 22 134 chrX 73033842 73033976 -93616320 + PB1D9 SINE Alu 1 119 -1 8 1142 847 192 152 11 chrX 73034061 73034245 -93616051 - B3 SINE B2 -6 210 1 9 1142 325 228 39 29 chrX 73034349 73034453 -93615843 + MT2B LTR ERVL 152 256 -345 9 1142 631 138 154 0 chrX 73034365 73034488 -93615808 + B1_Mus2 SINE Alu 5 146 -1 9 1142 252 0 0 0 chrX 73034525 73034553 -93615743 + (TG)n Simple_repeat Simple_repeat 2 29 0 9 1142 1058 85 28 0 chrX 73034616 73034757 -93615539 - B1_Mus2 SINE Alu -2 145 1 9 1142 845 213 69 30 chrX 73034864 73035067 -93615229 + B3 SINE B2 4 214 -2 9 1142 265 287 109 0 chrX 73035181 73035312 -93614984 - L1MA6 LINE L1 -367 5933 5791 9 1142 413 276 27 7 chrX 73035495 73035641 -93614655 + L1MB8 LINE L1 6028 6176 -2 9 1142 1683 81 45 187 chrX 73035643 73035941 -93614355 + ORR1A4 LTR MaLR 5 271 -58 9 1142 1039 31 131 0 chrX 73035941 73036071 -93614225 + B1_Mm SINE Alu 1 147 0 9 1142 1683 81 45 187 chrX 73036071 73036151 -93614145 + ORR1A4 LTR MaLR 272 329 0 9 1142 227 302 82 10 chrX 73036879 73036976 -93613320 + RSINE1 SINE B4 45 148 -17 1 1142 207 0 0 0 chrX 73037091 73037114 -93613182 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1142 729 276 9 38 chrX 73037122 73037333 -93612963 + B4 SINE B4 1 205 -87 1 1142 208 244 0 22 chrX 73037413 73037459 -93612837 + polypyrimidine Low_complexity Low_complexity 1 45 0 1 1142 1270 144 104 54 chrX 73037459 73037737 -93612559 + MTC LTR MaLR 3 294 -127 1 1142 895 246 145 26 chrX 73037739 73038090 -93612206 + Lx8 LINE L1 7076 7468 -5 1 1142 434 344 8 0 chrX 73038171 73038296 -93612000 - RSINE1 SINE B4 -16 149 24 1 1142 650 234 21 0 chrX 73038368 73038513 -93611783 - B1F SINE Alu -1 148 1 1 1142 357 24 0 0 chrX 73039134 73039176 -93611120 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1142 186 43 0 0 chrX 73039254 73039277 -93611019 + (TCTA)n Simple_repeat Simple_repeat 3 25 0 1 1142 732 172 8 0 chrX 73039331 73039459 -93610837 - B3 SINE B2 -86 130 2 1 1142 689 192 20 33 chrX 73039777 73039928 -93610368 + B1_Mur2 SINE Alu 1 149 0 1 1142 814 157 14 7 chrX 73039941 73040082 -93610214 + B1_Mur4 SINE Alu 7 148 -2 1 1142 325 315 28 0 chrX 73040929 73041037 -93609259 + PB1D7 SINE Alu 2 112 -8 1 1142 600 289 75 10 chrX 73041051 73041250 -93609046 + ID_B1 SINE B4 5 216 -8 1 1142 339 213 0 0 chrX 73041906 73041981 -93608315 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 1142 5650 78 16 19 chrX 73042294 73043093 -93607203 - L1_Mus3 LINE L1 -5 6633 5837 1 1142 397 195 157 25 chrX 73043162 73043283 -93607013 - B3A SINE B2 -61 137 1 1 1142 799 161 14 68 chrX 73043355 73043502 -93606794 + B1_Mur4 SINE Alu 2 140 -10 1 1142 279 93 0 0 chrX 73043761 73043804 -93606492 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 1 1142 1048 225 59 59 chrX 73043806 73044113 -93606183 - ORR1E LTR MaLR -50 309 3 1 1142 255 296 0 0 chrX 73044186 73044257 -93606039 + MTEa LTR MaLR 31 101 -278 1 1142 363 311 67 0 chrX 73044536 73044671 -93605625 + B1_Mur2 SINE Alu 5 148 -1 1 1142 344 265 39 2 chrX 73045462 73045586 -93604710 + B1F SINE Alu 13 144 -5 1 1142 293 167 67 0 chrX 73046063 73046123 -93604173 - PB1D10 SINE Alu -44 73 10 1 1142 451 307 7 35 chrX 73046178 73046323 -93603973 + B4A SINE B4 2 142 -150 1 1142 638 303 32 0 chrX 73046435 73046630 -93603666 + B4A SINE B4 1 211 -81 1 1142 198 0 0 0 chrX 73046630 73046652 -93603644 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 1142 511 340 95 4 chrX 73046652 73046698 -93603598 + B4 SINE B4 212 264 -28 1 1142 683 261 54 5 chrX 73047995 73048180 -93602116 + ID_B1 SINE B4 6 199 -25 1 1142 837 264 5 62 chrX 73048289 73048499 -93601797 + B3A SINE B2 1 198 0 1 1142 241 263 0 0 chrX 73048625 73048682 -93601614 + (CATA)n Simple_repeat Simple_repeat 2 58 0 1 1142 885 174 0 13 chrX 73048754 73048905 -93601391 - B1_Mur4 SINE Alu 0 150 2 1 1142 210 241 0 0 chrX 73048913 73048947 -93601349 + T-rich Low_complexity Low_complexity 46 79 0 1 1142 1184 35 21 0 chrX 73048947 73049090 -93601206 - B1_Mus2 SINE Alu 0 147 2 1 1142 210 241 0 0 chrX 73049090 73049134 -93601162 + T-rich Low_complexity Low_complexity 2 45 0 1 1142 509 289 26 52 chrX 73049135 73049155 -93601141 - ID_B1 SINE B4 -47 245 182 1 1142 718 219 0 20 chrX 73049155 73049304 -93600992 - B1_Mur2 SINE Alu -1 148 3 1 1142 509 289 26 52 chrX 73049304 73049345 -93600951 - ID_B1 SINE B4 -47 181 38 1 1142 231 204 0 0 chrX 73049679 73049733 -93600563 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1142 363 279 43 35 chrX 73051818 73051959 -93598337 + B1_Mur3 SINE Alu 1 142 -7 1 1142 216 269 90 0 chrX 73052006 73052073 -93598223 + PB1D9 SINE Alu 48 120 0 1 1142 868 115 35 21 chrX 73052091 73052233 -93598063 + B1_Mm SINE Alu 3 146 -1 1 1142 1461 64 0 26 chrX 73052253 73052446 -93597850 + B2_Mm2 SINE B2 2 189 -6 1 1142 220 351 21 0 chrX 73052461 73052555 -93597741 + BC1_Mm scRNA scRNA 6 101 -51 1 1142 282 29 0 0 chrX 73052569 73052604 -93597692 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1142 1097 45 0 8 chrX 73052605 73052739 -93597557 - B1_Mus1 SINE Alu -13 135 3 1 1142 807 184 206 6 chrX 73052860 73053040 -93597256 - B3 SINE B2 0 216 1 1 1142 475 282 8 31 chrX 73053254 73053382 -93596914 - RSINE1 SINE B4 -28 137 13 1 1142 2390 60 3 0 chrX 73053457 73053758 -93596538 + L1_Mus2 LINE L1 6264 6565 -1 1 1142 229 216 0 38 chrX 73053988 73054041 -93596255 - B1_Mur4 SINE Alu -87 63 13 1 1142 617 246 7 0 chrX 73054222 73054360 -93595936 - B1_Mus2 SINE Alu -8 139 1 1 1142 549 233 0 17 chrX 73054452 73054570 -93595726 + PB1D7 SINE Alu 5 120 0 1 1142 432 0 0 0 chrX 73054866 73054914 -93595382 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1142 252 0 0 0 chrX 73054915 73054943 -93595353 + (GA)n Simple_repeat Simple_repeat 1 28 0 1 1142 210 125 0 0 chrX 73055257 73055289 -93595007 - B2_Mm2 SINE B2 -66 129 98 1 1142 237 132 0 0 chrX 73055293 73055331 -93594965 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1142 1277 192 20 65 chrX 73055334 73055728 -93594568 + Lx4B LINE L1 6639 7018 -32 1 1142 22 0 0 0 chrX 73055812 73055834 -93594462 + AT_rich Low_complexity Low_complexity 1 22 0 1 1142 204 40 0 0 chrX 73056479 73056504 -93593792 + (GA)n Simple_repeat Simple_repeat 1 25 0 1 1142 241 270 26 26 chrX 73056536 73056612 -93593684 + PB1 SINE Alu 44 119 -8 1 1142 264 243 27 13 chrX 73056650 73056725 -93593571 - MIR SINE MIR -7 255 180 1 1142 468 284 11 192 chrX 73056904 73057021 -93593275 + ID_B1 SINE B4 5 218 -6 1 1142 791 163 14 21 chrX 73057021 73057165 -93593131 + B1_Mur3 SINE Alu 1 143 -6 1 1142 285 29 0 0 chrX 73057168 73057202 -93593094 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1 1142 944 123 7 0 chrX 73057433 73057571 -93592725 - B1_Mus1 SINE Alu -5 143 5 1 1142 2827 35 0 0 chrX 73057605 73057943 -93592353 + L1Md_F2 LINE L1 6233 6570 -12 1 1142 477 212 261 12 chrX 73058103 73058246 -93592050 - B3 SINE B2 -37 158 1 1 1142 1149 54 0 13 chrX 73058392 73058541 -93591755 - B1_Mus1 SINE Alu 0 148 2 1 1142 681 185 46 0 chrX 73058541 73058671 -93591625 + B1_Mur2 SINE Alu 8 143 -6 1 1142 767 168 51 46 chrX 73058749 73058924 -93591372 - B2_Mm2 SINE B2 -19 176 1 1 1142 647 166 20 3 chrX 73059513 73059631 -93590665 - B3 SINE B2 -76 119 2 1 1142 379 279 8 20 chrX 73059916 73060026 -93590270 + PB1D10 SINE Alu 6 120 -7 1 1142 288 0 0 0 chrX 73060032 73060064 -93590232 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 1 1142 234 262 11 87 chrX 73060205 73060297 -93589999 - PB1D9 SINE Alu -3 117 33 1 1142 739 218 7 47 chrX 73060305 73060454 -93589842 - B1_Mur4 SINE Alu -2 148 6 1 1142 537 312 67 28 chrX 73060450 73060628 -93589668 - B3 SINE B2 -30 186 2 1 1142 201 297 0 0 chrX 73061592 73061656 -93588640 + A-rich Low_complexity Low_complexity 1 64 0 1 1142 225 274 0 0 chrX 73062361 73062412 -93587884 - tRNA-Ala-GCY_ tRNA tRNA -24 51 1 1 1142 266 243 0 26 chrX 73062607 73062683 -93587613 + MamRep605 Unknown Unknown 445 518 -358 1 1142 676 199 28 14 chrX 73062869 73063012 -93587284 + B1_Mur4 SINE Alu 1 145 -5 1 1142 531 0 0 0 chrX 73063705 73063764 -93586532 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 1142 396 0 0 0 chrX 73064624 73064668 -93585628 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1142 783 320 0 0 chrX 73065022 73065188 -93585108 + B3 SINE B2 1 166 -50 1 1142 783 64 0 0 chrX 73065188 73065298 -93584998 + (CA)n Simple_repeat Simple_repeat 1 110 0 1 1142 783 320 0 0 chrX 73065298 73065309 -93584987 + B3 SINE B2 167 177 -39 1 1142 721 239 7 0 chrX 73065457 73065599 -93584697 + B1_Mus1 SINE Alu 1 143 -5 1 1142 461 344 30 0 chrX 73066150 73066281 -93584015 - ID_B1 SINE B4 -12 212 78 1 1142 520 258 55 94 chrX 73066819 73067020 -93583276 - B3A SINE B2 -2 196 4 1 1142 622 215 29 7 chrX 73067241 73067377 -93582919 - B1_Mur4 SINE Alu -7 143 5 1 1142 567 0 0 0 chrX 73067393 73067456 -93582840 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 1 1142 232 261 200 0 chrX 73067478 73067543 -93582753 - B1_Mur3 SINE Alu -71 78 1 1 1142 295 300 70 0 chrX 73067554 73067654 -93582642 - PB1D9 SINE Alu -12 108 2 1 1142 190 258 19 136 chrX 73068513 73068616 -93581680 - L2a LINE L2 -15 3411 3321 1 1142 1120 188 4 9 chrX 73068797 73069022 -93581274 + URR1A DNA MER1_type 1 224 -2 1 1142 1119 110 0 0 chrX 73069146 73069309 -93580987 + L1_Mus1 LINE L1 6405 6567 0 1 1142 1180 50 0 0 chrX 73069573 73069714 -93580582 + B1_Mus1 SINE Alu 1 141 -7 1 1142 292 220 0 33 chrX 73070094 73070144 -93580152 + ID SINE ID 6 53 -171 1 1142 1795 172 96 28 chrX 73070144 73070508 -93579788 + ORR1B1 LTR MaLR 3 391 -3 1 1142 334 312 56 31 chrX 73070508 73070629 -93579667 + ID_B1 SINE B4 91 215 -9 1 1142 267 31 0 0 chrX 73070629 73070661 -93579635 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 1 1142 743 184 7 21 chrX 73070795 73070939 -93579357 - URR1B DNA MER1_type -1 224 83 1 1142 433 299 7 53 chrX 73071158 73071310 -93578986 + ID_B1 SINE B4 78 222 -2 1 1142 313 273 0 0 chrX 73071502 73071568 -93578728 + ID4_ SINE ID 3 68 -15 1 1142 294 234 24 0 chrX 73071625 73071705 -93578591 + B1F SINE Alu 37 149 0 2 1142 33 0 0 0 chrX 73071895 73071928 -93578368 + AT_rich Low_complexity Low_complexity 1 33 0 2 1142 291 329 0 0 chrX 73071950 73072032 -93578264 - RSINE1 SINE B4 -30 135 54 2 1142 4804 94 15 0 chrX 73072482 73073154 -93577142 + L1_Mus3 LINE L1 5957 6638 0 2 1142 201 121 0 0 chrX 73073157 73073190 -93577106 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1142 229 231 78 78 chrX 73073216 73073357 -93576939 - B2_Mm2 SINE B2 -7 188 48 2 1142 464 294 66 0 chrX 73073245 73073381 -93576915 - RSINE1 SINE B4 -2 163 19 2 1142 378 0 0 0 chrX 73073456 73073498 -93576798 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1142 1300 53 63 23 chrX 73073620 73073795 -93576501 + B2_Mm1a SINE B2 2 183 -10 2 1142 1546 33 22 0 chrX 73073929 73074112 -93576184 - B2_Mm1t SINE B2 -5 188 2 2 1142 242 167 96 96 chrX 73074143 73074289 -93576007 + Lx9 LINE L1 7499 7644 0 2 1142 270 0 0 0 chrX 73074351 73074381 -93575915 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2 1142 542 299 85 25 chrX 73074381 73074580 -93575716 - ID_B1 SINE B4 -12 212 2 2 1142 245 209 143 0 chrX 73074615 73074706 -93575590 + Lx9 LINE L1 7534 7637 -7 2 1142 468 286 42 14 chrX 73074731 73074873 -93575423 + B1_Mur1 SINE Alu 1 146 -3 2 1142 2438 215 100 76 chrX 73074988 73075869 -93574427 + RLTR13D6 LTR ERVK 1 902 0 2 1142 3267 177 87 6 chrX 73075869 73076549 -93573747 - RMER6A LTR ERVK -21 735 1 2 1142 395 280 16 23 chrX 73076701 73076829 -93573467 - B1F2 SINE Alu -18 131 5 2 1142 411 232 26 43 chrX 73077281 73077398 -93572898 - B3A SINE B2 -1 197 83 2 1142 556 296 82 6 chrX 73077706 73077876 -93572420 + MIRc SINE MIR 64 246 -22 2 1142 235 277 77 0 chrX 73079095 73079160 -93571136 + ID4_ SINE ID 13 82 -1 2 1142 1171 76 80 23 chrX 73079308 73079484 -93570812 + B2_Mm1t SINE B2 1 186 -7 2 1142 196 384 39 23 chrX 73079923 73080051 -93570245 - L2a LINE L2 -7 3419 3290 2 1142 282 293 0 13 chrX 73080330 73080406 -93569890 - ID4 SINE ID -8 75 1 2 1142 363 274 10 10 chrX 73080647 73080743 -93569553 - PB1D10 SINE Alu -17 100 5 2 1142 252 0 0 0 chrX 73081076 73081104 -93569192 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1142 238 266 142 11 chrX 73081105 73081226 -93569070 - MIRc SINE MIR -116 152 13 2 1142 368 123 0 0 chrX 73081431 73081488 -93568808 - Lx4A LINE L1 -120 6938 6882 2 1142 1243 34 7 0 chrX 73081539 73081686 -93568610 - B1_Mus1 SINE Alu 0 148 1 2 1142 1050 76 178 0 chrX 73081926 73082083 -93568213 + B2_Mm2 SINE B2 2 186 -9 2 1142 456 19 0 0 chrX 73082108 73082161 -93568135 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 1142 243 0 0 0 chrX 73082179 73082206 -93568090 + (GA)n Simple_repeat Simple_repeat 1 27 0 2 1142 661 135 0 0 chrX 73082206 73082302 -93567994 - B1_Mus2 SINE Alu -19 128 33 2 1142 384 327 63 48 chrX 73082495 73082765 -93567531 + B4 SINE B4 1 274 -18 2 1142 848 259 68 29 chrX 73082909 73083116 -93567180 - ID_B1 SINE B4 -2 222 8 2 1142 431 265 8 33 chrX 73083140 73083261 -93567035 - PB1D9 SINE Alu 0 120 3 2 1142 616 280 31 13 chrX 73083643 73083802 -93566494 - B3A SINE B2 -36 162 1 2 1142 408 264 99 9 chrX 73083839 73083950 -93566346 + PB1 SINE Alu 6 126 -1 2 1142 294 242 32 0 chrX 73083958 73084020 -93566276 + ID4_ SINE ID 1 64 -19 2 1142 796 245 48 19 chrX 73084130 73084338 -93565958 + B3 SINE B2 1 214 -2 2 1142 856 184 121 26 chrX 73084354 73084544 -93565752 - B3 SINE B2 0 216 9 2 1142 385 229 53 35 chrX 73084964 73085077 -93565219 - PB1D7 SINE Alu -1 119 5 2 1142 428 228 134 0 chrX 73085386 73085513 -93564783 + B1F SINE Alu 1 144 -5 2 1142 304 89 54 0 chrX 73086629 73086685 -93563611 + Lx9 LINE L1 7586 7644 0 2 1142 1498 65 5 0 chrX 73087293 73087492 -93562804 + L1_Mus1 LINE L1 6368 6567 0 2 1142 288 130 0 0 chrX 73087503 73087549 -93562747 + (A)n Simple_repeat Simple_repeat 1 46 0 2 1142 345 100 0 0 chrX 73087592 73087642 -93562654 + (A)n Simple_repeat Simple_repeat 1 50 0 2 1142 21 0 0 0 chrX 73087806 73087827 -93562469 + AT_rich Low_complexity Low_complexity 1 21 0 2 1142 404 291 66 127 chrX 73089029 73089126 -93561170 + ID_B1 SINE B4 1 214 -10 2 1142 605 229 46 0 chrX 73089126 73089257 -93561039 + B1_Mur3 SINE Alu 3 139 -10 2 1142 219 25 24 48 chrX 73089265 73089307 -93560989 + (TAA)n Simple_repeat Simple_repeat 3 43 0 2 1142 204 252 9 26 chrX 73089501 73089615 -93560681 + A-rich Low_complexity Low_complexity 3 114 0 2 1142 686 177 56 21 chrX 73090747 73090891 -93559405 + B1_Mur4 SINE Alu 2 150 0 2 1142 186 43 0 0 chrX 73091051 73091074 -93559222 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 2 1142 216 0 0 0 chrX 73091361 73091385 -93558911 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1142 2644 70 25 6 chrX 73091955 73092317 -93557979 + L1Md_F3 LINE L1 6214 6582 -2 2 1142 450 257 42 21 chrX 73092707 73092850 -93557446 + B1F SINE Alu 1 146 -3 2 1142 203 0 0 36 chrX 73092944 73092972 -93557324 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 2 1142 454 272 107 16 chrX 73093132 73093290 -93557006 + B3 SINE B2 1 164 -31 2 1142 21 0 0 0 chrX 73093537 73093558 -93556738 + AT_rich Low_complexity Low_complexity 1 21 0 2 1142 816 209 123 34 chrX 73093721 73094014 -93556282 + Lx9 LINE L1 7325 7643 -1 2 1142 298 229 49 0 chrX 73094031 73094092 -93556204 + ID4 SINE ID 3 66 -17 2 1142 459 150 0 12 chrX 73094248 73094329 -93555967 + B2_Mm2 SINE B2 81 160 -35 2 1142 288 299 11 65 chrX 73094878 73094971 -93555325 + L2a LINE L2 3319 3406 -20 2 1142 288 0 0 0 chrX 73096431 73096463 -93553833 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1142 319 243 9 97 chrX 73096638 73096752 -93553544 - ID_B1 SINE B4 0 224 121 2 1142 308 24 24 0 chrX 73097321 73097362 -93552934 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 2 1142 318 340 7 65 chrX 73097698 73097852 -93552444 + ID_B1 SINE B4 73 217 -7 2 1142 546 287 22 14 chrX 73097716 73097854 -93552442 + B1F SINE Alu 8 146 -3 2 1142 24 0 0 0 chrX 73097865 73097889 -93552407 + AT_rich Low_complexity Low_complexity 1 24 0 2 1142 384 220 206 11 chrX 73097978 73098070 -93552226 + PB1D7 SINE Alu 1 110 -10 2 1142 219 320 13 0 chrX 73098112 73098190 -93552106 + ID2 SINE ID 1 79 -4 2 1142 335 287 20 10 chrX 73098358 73098457 -93551839 + B1F2 SINE Alu 11 109 -8 2 1142 406 242 174 8 chrX 73098661 73098782 -93551514 - B1_Mur1 SINE Alu -8 141 1 2 1142 826 294 16 0 chrX 73098812 73099006 -93551290 + ID_B1 SINE B4 4 200 -24 2 1142 325 302 136 21 chrX 73099176 73099399 -93550897 + L1MD1 LINE L1 4600 4843 -1303 2 1142 273 57 0 0 chrX 73099412 73099447 -93550849 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1142 254 294 0 0 chrX 73099451 73099519 -93550777 - ID4 SINE ID -14 69 2 2 1142 1910 232 26 7 chrX 73099609 73100069 -93550227 + Lx6 LINE L1 6969 7437 -23 2 1142 2236 39 61 0 chrX 73100069 73100349 -93549947 - L1Md_T LINE L1 -1 6581 6285 2 1142 236 361 29 49 chrX 73100366 73100468 -93549828 + MT2B LTR ERVL 154 253 -348 2 1142 499 278 90 0 chrX 73100380 73100513 -93549783 + ID_B1 SINE B4 80 224 0 2 1142 384 297 19 106 chrX 73100554 73100690 -93549606 + PB1D7 SINE Alu 2 149 0 2 1142 883 256 6 0 chrX 73100695 73100863 -93549433 + B3 SINE B2 2 170 -46 2 1142 399 155 3 3 chrX 73100902 73100977 -93549319 + B2_Mm2 SINE B2 50 124 -92 2 1142 253 103 0 0 chrX 73100945 73100984 -93549312 + MT2_Mm LTR ERVL 455 493 0 2 1142 5380 68 33 30 chrX 73100984 73101772 -93548524 + MERVL-int LTR ERVL 1 790 -4695 2 1142 285 127 0 0 chrX 73101772 73101819 -93548477 + B2_Mm2 SINE B2 114 159 -34 2 1142 264 59 0 0 chrX 73101819 73101853 -93548443 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 2 1142 260 217 17 0 chrX 73101898 73101958 -93548338 + L1MD1 LINE L1 5579 5639 -720 2 1142 406 331 174 39 chrX 73101981 73102286 -93548010 - ORR1E LTR MaLR -11 348 3 2 1142 326 273 0 0 chrX 73102400 73102466 -93547830 + tRNA-Ala-GCY_ tRNA tRNA 1 66 -9 2 1142 459 275 0 0 chrX 73102467 73102558 -93547738 + RSINE1 SINE B4 49 139 -26 2 1142 277 260 164 39 chrX 73102819 73102923 -93547373 + PB1D10 SINE Alu 1 117 0 2 1142 357 82 0 0 chrX 73102980 73103029 -93547267 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1142 946 244 23 26 chrX 73103061 73103368 -93546928 + L1MD1 LINE L1 5921 6226 -16 2 1142 781 228 0 13 chrX 73103405 73103556 -93546740 + B1_Mur1 SINE Alu 1 149 0 2 1142 1111 75 7 0 chrX 73103793 73103939 -93546357 + B1_Mus2 SINE Alu 1 147 0 2 1142 329 58 19 0 chrX 73103959 73104011 -93546285 + (CAAAA)n Simple_repeat Simple_repeat 3 55 0 2 1142 271 348 78 11 chrX 73104116 73104296 -93546000 + L2a LINE L2 3069 3260 -166 2 1142 826 269 40 70 chrX 73104329 73104629 -93545667 + B4A SINE B4 1 291 -1 2 1142 232 328 118 21 chrX 73105008 73105195 -93545101 + L2a LINE L2 3222 3426 0 2 1142 259 378 0 13 chrX 73105220 73105234 -93545062 + B4 SINE B4 74 144 -145 2 1142 291 310 0 0 chrX 73105234 73105292 -93545004 + PB1D10 SINE Alu 2 59 -58 2 1142 252 333 17 43 chrX 73105288 73105315 -93544981 + ID SINE ID 56 79 -145 3 1142 230 327 26 35 chrX 73105315 73105429 -93544867 + PB1D10 SINE Alu 3 115 -2 3 1142 727 121 153 0 chrX 73105441 73105565 -93544731 - B1_Mur4 SINE Alu -6 144 2 3 1142 208 246 17 17 chrX 73105744 73105802 -93544494 + L2 LINE L2 1572 1629 -1790 3 1142 1006 211 106 24 chrX 73106378 73106670 -93543626 - RMER1C Other Other 0 1342 1027 3 1142 392 281 39 10 chrX 73106758 73106862 -93543434 - PB1D7 SINE Alu -7 113 7 3 1142 353 234 134 9 chrX 73107234 73107346 -93542950 + PB1 SINE Alu 2 127 0 3 1142 443 287 85 15 chrX 73107722 73107993 -93542303 + L1MB5 LINE L1 5708 5999 -163 3 1142 961 240 14 24 chrX 73108057 73108270 -93542026 + B3 SINE B2 6 216 0 3 1142 832 210 23 42 chrX 73108473 73108687 -93541609 + B3 SINE B2 1 210 -6 3 1142 414 291 22 22 chrX 73108722 73108859 -93541437 + B1F SINE Alu 1 137 -12 3 1142 284 250 0 16 chrX 73108927 73108988 -93541308 + B1F1 SINE Alu 1 60 -89 3 1142 216 188 0 0 chrX 73109217 73109265 -93541031 + T-rich Low_complexity Low_complexity 1 48 0 3 1142 326 246 40 53 chrX 73109266 73109416 -93540880 - L1M2 LINE L1 -1388 4755 4608 3 1142 372 255 45 58 chrX 73109410 73109564 -93540732 + L1MA4 LINE L1 5784 5935 -365 3 1142 253 238 16 16 chrX 73109918 73109982 -93540314 + CT-rich Low_complexity Low_complexity 1 64 0 3 1142 242 266 106 30 chrX 73109982 73110048 -93540248 - ID4 SINE ID -11 72 2 3 1142 405 282 114 0 chrX 73110102 73110233 -93540063 + MER2 DNA MER2_type 1 146 -199 3 1142 231 286 159 0 chrX 73110273 73110336 -93539960 + tRNA-Ala-GCY_ tRNA tRNA 1 73 -2 3 1142 368 359 78 46 chrX 73111228 73111447 -93538849 + B4A SINE B4 9 234 -58 3 1142 23 33 0 0 chrX 73111523 73111553 -93538743 + AT_rich Low_complexity Low_complexity 1 30 0 3 1142 850 260 0 0 chrX 73111661 73111830 -93538466 + B3 SINE B2 1 169 -47 3 1142 684 258 115 22 chrX 73111883 73112065 -93538231 - ID_B1 SINE B4 -25 199 1 3 1142 202 188 0 0 chrX 73112127 73112159 -93538137 + polypyrimidine Low_complexity Low_complexity 2 33 0 3 1142 254 32 0 0 chrX 73112170 73112201 -93538095 - B1_Mus2 SINE Alu -10 137 107 3 1142 633 257 62 0 chrX 73112541 73112685 -93537611 + RSINE1 SINE B4 3 155 -10 3 1142 995 223 61 19 chrX 73112689 73113036 -93537260 + Lx7 LINE L1 5587 5920 -1553 3 1142 324 0 0 0 chrX 73113429 73113465 -93536831 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1142 342 275 0 0 chrX 73113466 73113535 -93536761 - tRNA-Ala-GCY_ tRNA tRNA -5 70 2 3 1142 390 246 91 45 chrX 73113889 73114021 -93536275 + ID_B1 SINE B4 84 221 -3 3 1142 1050 206 5 18 chrX 73114145 73114363 -93535933 + B3 SINE B2 1 215 -1 3 1142 257 271 116 0 chrX 73114614 73114713 -93535583 - B1F SINE Alu -5 144 5 3 1142 1050 254 3 46 chrX 73114917 73115219 -93535077 + B4A SINE B4 2 290 -2 3 1142 792 178 0 27 chrX 73116175 73116325 -93533971 + B1_Mur3 SINE Alu 3 148 -1 3 1142 843 105 0 0 chrX 73116328 73116452 -93533844 + (GAAA)n Simple_repeat Simple_repeat 1 124 0 3 1142 356 276 41 0 chrX 73116571 73116669 -93533627 - RSINE1 SINE B4 -22 143 42 3 1142 456 67 0 0 chrX 73116924 73116984 -93533312 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 1142 307 368 8 16 chrX 73117009 73117136 -93533160 - ID_B1 SINE B4 -20 204 79 3 1142 246 248 131 8 chrX 73117141 73117271 -93533025 - L1MD3 LINE L1 -13 7982 7837 3 1142 426 266 93 73 chrX 73117639 73117789 -93532507 - RSINE1 SINE B4 -1 164 12 3 1142 308 279 28 28 chrX 73117998 73118105 -93532191 - PB1D10 SINE Alu -10 107 1 3 1142 25 31 0 0 chrX 73118586 73118618 -93531678 + AT_rich Low_complexity Low_complexity 1 32 0 3 1142 309 87 31 42 chrX 73119562 73119658 -93530638 + A-rich Low_complexity Low_complexity 2 96 0 3 1142 333 47 0 0 chrX 73119915 73119958 -93530338 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 3 1142 216 272 11 69 chrX 73120998 73121085 -93529211 - PB1 SINE Alu 0 127 46 3 1142 288 223 328 32 chrX 73121657 73121782 -93528514 + RSINE1 SINE B4 3 164 -1 3 1142 333 0 0 0 chrX 73121782 73121819 -93528477 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 3 1142 331 217 0 14 chrX 73121981 73122051 -93528245 + B1F SINE Alu 41 109 -40 3 1142 269 347 21 0 chrX 73122617 73122712 -93527584 + RSINE1 SINE B4 3 99 -66 3 1142 1735 241 5 8 chrX 73122719 73123116 -93527180 - Lx6 LINE L1 -26 7434 7039 3 1142 303 28 0 0 chrX 73123124 73123160 -93527136 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 3 1142 226 211 0 0 chrX 73123211 73123249 -93527047 + B1F2 SINE Alu 15 52 -97 3 1142 234 162 316 63 chrX 73123217 73123296 -93527000 + PB1D7 SINE Alu 21 119 -1 3 1142 268 250 17 0 chrX 73123316 73123376 -93526920 + ID SINE ID 8 68 -156 3 1142 280 174 125 23 chrX 73123377 73123465 -93526831 + PB1D10 SINE Alu 21 117 0 3 1142 410 282 198 0 chrX 73123842 73124069 -93526227 - B4A SINE B4 -17 275 4 3 1142 663 13 0 0 chrX 73124077 73124153 -93526143 + (TC)n Simple_repeat Simple_repeat 1 76 0 3 1142 353 182 26 13 chrX 73124283 73124361 -93525935 + ID4_ SINE ID 2 80 -3 3 1142 189 107 0 0 chrX 73124663 73124691 -93525605 + (CACG)n Simple_repeat Simple_repeat 4 31 0 3 1142 191 286 45 45 chrX 73124876 73124942 -93525354 + L2b LINE L2 3312 3423 -3 3 1142 247 219 31 0 chrX 73125306 73125370 -93524926 + T-rich Low_complexity Low_complexity 4 69 0 3 1142 203 97 31 46 chrX 73125433 73125448 -93524848 + A-rich Low_complexity Low_complexity 2 16 0 3 1142 1185 55 7 0 chrX 73125448 73125594 -93524702 + B1_Mus2 SINE Alu 1 147 0 3 1142 203 97 31 46 chrX 73125594 73125643 -93524653 + A-rich Low_complexity Low_complexity 17 64 0 3 1142 32 0 0 0 chrX 73125643 73125675 -93524621 + AT_rich Low_complexity Low_complexity 1 32 0 3 1142 402 278 50 94 chrX 73125688 73125847 -93524449 + RSINE1 SINE B4 14 165 0 3 1142 845 111 95 0 chrX 73125874 73126000 -93524296 - B1_Mur4 SINE Alu -12 138 1 3 1142 31 44 0 0 chrX 73126002 73126047 -93524249 + AT_rich Low_complexity Low_complexity 1 45 0 3 1142 617 230 0 6 chrX 73126180 73126512 -93523784 + (TG)n Simple_repeat Simple_repeat 1 329 0 3 1142 229 329 14 14 chrX 73126532 73126603 -93523693 - ID4_ SINE ID -11 72 2 3 1142 2105 61 0 35 chrX 73126843 73127133 -93523163 - L1Md_F2 LINE L1 0 6582 6303 3 1142 637 112 63 8 chrX 73127564 73127690 -93522606 + Lx5 LINE L1 6915 7047 -3 3 1142 189 0 0 0 chrX 73127861 73127882 -93522414 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 3 1142 343 303 117 59 chrX 73128373 73128629 -93521667 + MER2 DNA MER2_type 20 290 -55 3 1142 584 233 19 0 chrX 73128908 73129011 -93521285 - PB1D9 SINE Alu -13 107 3 3 1142 335 323 0 57 chrX 73128917 73129023 -93521273 - ID_B1 SINE B4 -48 176 78 3 1142 347 60 0 20 chrX 73129023 73129074 -93521222 + (TAA)n Simple_repeat Simple_repeat 1 50 0 3 1142 245 289 25 62 chrX 73129326 73129407 -93520889 - RSINE1 SINE B4 -59 106 29 3 1142 347 302 0 30 chrX 73129417 73129516 -93520780 - PB1D7 SINE Alu -1 119 24 3 1142 1613 36 5 0 chrX 73129774 73129966 -93520330 + B2_Mm1t SINE B2 1 193 0 3 1142 24 32 0 0 chrX 73129966 73129997 -93520299 + AT_rich Low_complexity Low_complexity 1 31 0 3 1142 508 265 83 38 chrX 73130324 73130638 -93519658 + L1MB8 LINE L1 5848 6175 -3 3 1142 1350 74 6 6 chrX 73130648 73130825 -93519471 + B2_Mm2 SINE B2 1 177 -18 3 1142 387 60 0 0 chrX 73130857 73130907 -93519389 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 3 1142 4763 120 71 12 chrX 73131982 73132781 -93517515 - Lx4A LINE L1 -23 7035 6190 3 1142 809 168 7 0 chrX 73132814 73132951 -93517345 - B1_Mus1 SINE Alu 0 148 11 3 1142 1970 176 56 6 chrX 73133005 73133364 -93516932 + MTC LTR MaLR 10 386 -35 3 1142 556 162 48 0 chrX 73133518 73133623 -93516673 - B1F2 SINE Alu -2 147 38 3 1142 377 207 23 0 chrX 73133628 73133715 -93516581 - Lx9 LINE L1 -159 7485 7397 3 1142 234 150 0 0 chrX 73133810 73133850 -93516446 + (GGGA)n Simple_repeat Simple_repeat 1 40 0 3 1142 232 290 114 14 chrX 73133851 73133921 -93516375 - B4A SINE B4 -200 92 16 3 1142 28 29 0 0 chrX 73134107 73134142 -93516154 + AT_rich Low_complexity Low_complexity 1 35 0 3 1142 295 254 42 42 chrX 73135113 73135232 -93515064 - L1_Rod LINE L1 0 5847 5729 3 1142 513 276 0 15 chrX 73135293 73135429 -93514867 + B1F SINE Alu 15 148 -1 3 1142 564 258 0 0 chrX 73135483 73135603 -93514693 + ID_B1 SINE B4 104 223 -1 3 1142 454 270 0 20 chrX 73135919 73136021 -93514275 + PB1D10 SINE Alu 2 101 -16 3 1142 568 294 82 33 chrX 73136035 73136218 -93514078 + ID_B1 SINE B4 2 193 -31 3 1142 450 331 56 0 chrX 73136207 73136349 -93513947 + RSINE1 SINE B4 16 165 0 3 1142 323 185 0 0 chrX 73136381 73136435 -93513861 + ID_B1 SINE B4 171 224 0 3 1142 32 75 0 0 chrX 73136765 73136832 -93513464 + AT_rich Low_complexity Low_complexity 1 67 0 3 1142 344 0 0 161 chrX 73136871 73137051 -93513245 + (CAGAG)n Simple_repeat Simple_repeat 5 155 0 4 1142 474 186 58 19 chrX 73137054 73137158 -93513138 + B1F2 SINE Alu 42 149 0 4 1142 603 337 91 34 chrX 73137452 73137750 -93512546 + MLT1A0 LTR MaLR 1 315 -50 4 1142 279 178 0 61 chrX 73137771 73137837 -93512459 - URR1B DNA MER1_type 0 225 164 4 142 388 114 0 43 chrX 73138119 73138211 -93512085 + (CAGAGA)n Simple_repeat Simple_repeat 4 91 0 4 1143 767 256 31 23 chrX 73138260 73138516 -93511780 + Lx8 LINE L1 4969 5226 -621 4 1143 512 312 46 41 chrX 73138516 73138713 -93511583 + B3A SINE B2 1 198 0 4 1143 269 242 142 15 chrX 73138792 73138926 -93511370 + Lx6 LINE L1 7283 7433 -27 4 1143 188 34 0 33 chrX 73138976 73139006 -93511290 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1143 361 179 60 0 chrX 73139006 73139073 -93511223 - B1_Mur4 SINE Alu -11 139 69 4 1143 1810 221 47 56 chrX 73139111 73139359 -93510937 + Lx8 LINE L1 5278 5526 -321 4 1143 1112 167 11 0 chrX 73139359 73139545 -93510751 - B2_Mm1t SINE B2 -5 188 1 4 1143 1810 276 58 78 chrX 73139545 73140345 -93509951 + Lx8 LINE L1 5527 6326 -1147 4 1143 955 245 11 0 chrX 73140345 73140529 -93509767 - B3 SINE B2 -30 186 1 4 1143 1832 171 117 3 chrX 73140595 73140701 -93509595 - MTD LTR MaLR -1 418 305 4 1143 3183 61 0 8 chrX 73140701 73141100 -93509196 - MTA_Mm LTR MaLR 0 396 1 4 1143 1832 171 117 3 chrX 73141100 73141351 -93508945 - MTD LTR MaLR -115 304 21 4 1143 281 247 19 123 chrX 73141980 73142086 -93508210 - ID_B1 SINE B4 -129 95 1 4 1143 617 301 12 12 chrX 73142581 73142749 -93507547 - ID_B1 SINE B4 -6 218 51 4 1143 228 270 79 26 chrX 73144033 73144109 -93506187 + MIRc SINE MIR 30 109 -159 4 1143 381 268 44 101 chrX 73144178 73144336 -93505960 + B1F2 SINE Alu 1 149 0 4 1143 757 245 78 0 chrX 73144419 73144623 -93505673 - ID_B1 SINE B4 -3 221 2 4 1143 324 0 0 0 chrX 73144801 73144837 -93505459 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1143 492 292 40 46 chrX 73144920 73145071 -93505225 + B3A SINE B2 1 150 -48 4 1143 352 111 14 14 chrX 73145078 73145151 -93505145 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 1143 406 257 18 27 chrX 73145731 73145843 -93504453 + PB1D10 SINE Alu 6 116 -1 4 1143 2092 64 165 9 chrX 73145889 73146222 -93504074 + L1_Mus3 LINE L1 6254 6638 0 4 1143 238 225 167 26 chrX 73146820 73146934 -93503362 - L1ME4a LINE L1 -6 6118 5989 4 1143 685 213 8 0 chrX 73147026 73147153 -93503143 + ID_B1 SINE B4 88 215 -9 4 1143 847 269 14 37 chrX 73147173 73147389 -93502907 - ID_B1 SINE B4 -6 218 8 4 1143 210 208 0 0 chrX 73147656 73147709 -93502587 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 4 1143 550 305 14 0 chrX 73147710 73147851 -93502445 - B1F1 SINE Alu -2 147 5 4 1143 26 0 0 0 chrX 73147931 73147957 -93502339 + AT_rich Low_complexity Low_complexity 1 26 0 4 1143 32335 68 6 12 chrX 73147988 73151879 -93498417 - L1Md_F2 LINE L1 -1 6581 2715 4 1143 1093 82 7 14 chrX 73151879 73152027 -93498269 - B1_Mus2 SINE Alu 0 147 1 4 1143 32335 72 5 12 chrX 73152027 73154205 -93496091 - L1Md_F2 LINE L1 -3169 2714 556 4 1143 882 145 0 0 chrX 73154220 73154372 -93495924 + (TTCC)n Simple_repeat Simple_repeat 3 154 0 4 1143 610 241 0 21 chrX 73154381 73154525 -93495771 - B1_Mur3 SINE Alu -8 141 1 4 1143 2979 205 31 8 chrX 73154570 73155175 -93495121 - Lx5 LINE L1 0 7050 6432 4 1143 2383 73 0 0 chrX 73155234 73155535 -93494761 - MTA_Mm LTR MaLR 0 396 96 4 1143 249 86 0 0 chrX 73155519 73155554 -93494742 + MTA_Mm LTR MaLR 62 96 -300 4 1143 552 275 112 0 chrX 73155633 73155648 -93494648 - B3 SINE B2 -17 199 185 4 1143 486 0 0 0 chrX 73155648 73155702 -93494594 + (TA)n Simple_repeat Simple_repeat 1 54 0 4 1143 552 275 112 0 chrX 73155702 73155864 -93494432 - B3 SINE B2 -32 184 3 4 1143 220 399 26 53 chrX 73156608 73156759 -93493537 + MER5A DNA MER1_type 43 189 0 4 1143 267 328 0 0 chrX 73157181 73157248 -93493048 - RSINE1 SINE B4 -63 102 36 4 1143 657 280 42 26 chrX 73157372 73157563 -93492733 - B3A SINE B2 -2 196 3 4 1143 405 180 0 0 chrX 73157731 73157820 -93492476 + (TA)n Simple_repeat Simple_repeat 2 90 0 4 1143 278 316 0 21 chrX 73158657 73158754 -93491542 + CT-rich Low_complexity Low_complexity 3 97 0 4 1143 569 289 64 0 chrX 73158763 73158936 -93491360 - ID_B1 SINE B4 -36 188 5 4 1143 812 168 15 0 chrX 73159869 73160000 -93490296 + B1_Mus2 SINE Alu 9 141 -6 4 1143 28 0 0 0 chrX 73160033 73160061 -93490235 + AT_rich Low_complexity Low_complexity 1 28 0 4 1143 458 328 0 8 chrX 73160074 73160191 -93490105 + ID_B1 SINE B4 78 193 -31 4 1143 23 0 0 0 chrX 73160272 73160295 -93490001 + AT_rich Low_complexity Low_complexity 1 23 0 4 1143 378 326 15 44 chrX 73160320 73160455 -93489841 - RSINE1 SINE B4 -6 159 29 4 1143 1954 201 44 10 chrX 73162293 73162700 -93487596 - MTC LTR MaLR 0 421 1 4 1143 629 287 137 16 chrX 73162747 73162995 -93487301 + B4A SINE B4 1 278 -14 4 1143 306 0 0 0 chrX 73163008 73163042 -93487254 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1143 424 271 0 30 chrX 73163374 73163473 -93486823 - B1_Mur2 SINE Alu -9 140 45 4 1143 737 289 10 12 chrX 73163593 73163802 -93486494 - B3 SINE B2 -5 211 4 4 1143 22460 74 2 9 chrX 73163802 73166130 -93484166 + L1Md_F2 LINE L1 587 2914 -2969 4 1143 1877 49 12 16 chrX 73166130 73166377 -93483919 + L1Md_F2 LINE L1 6336 6581 -1 4 1143 22460 81 2 73 chrX 73166377 73169493 -93480803 + L1Md_F2 LINE L1 2915 5585 -298 4 1143 7720 88 5 12 chrX 73169494 73170496 -93479800 + L1Md_F2 LINE L1 5587 6581 -1 4 1143 234 81 0 0 chrX 73170608 73170645 -93479651 + (TATG)n Simple_repeat Simple_repeat 4 40 0 4 1143 425 315 71 0 chrX 73170657 73170784 -93479512 - RSINE1 SINE B4 -19 146 11 4 1143 402 115 0 0 chrX 73171287 73171348 -93478948 + (TTTC)n Simple_repeat Simple_repeat 2 62 0 4 1143 390 42 0 0 chrX 73172270 73172318 -93477978 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1143 225 286 0 0 chrX 73173087 73173136 -93477160 + B1F1 SINE Alu 9 57 -92 4 1143 331 222 0 60 chrX 73173433 73173500 -93476796 - ID4 SINE ID -2 81 19 4 1143 866 266 49 0 chrX 73173586 73173789 -93476507 - B3 SINE B2 0 216 4 4 1143 308 214 70 14 chrX 73173812 73173883 -93476413 - ID4_ SINE ID -5 78 4 4 1143 294 320 25 32 chrX 73174130 73174288 -93476008 + CR1_Mam LINE CR1 1754 1910 -294 4 1143 415 74 14 14 chrX 73174683 73174752 -93475544 + (TC)n Simple_repeat Simple_repeat 2 70 0 4 1143 969 265 5 5 chrX 73174901 73175098 -93475198 - B3 SINE B2 -19 197 1 4 1143 351 160 0 0 chrX 73175154 73175229 -93475067 + CT-rich Low_complexity Low_complexity 2 76 0 4 1143 776 137 30 8 chrX 73175230 73175362 -93474934 - B1_Mur4 SINE Alu -7 143 9 4 1143 356 212 39 110 chrX 73175269 73175396 -93474900 - MT2B LTR ERVL -345 256 139 4 1143 252 344 54 31 chrX 73175501 73175554 -93474742 - ID_B1 SINE B4 -81 143 12 4 1143 321 250 0 53 chrX 73175554 73175630 -93474666 - ID4 SINE ID 0 83 12 4 1143 407 351 16 13 chrX 73176174 73176315 -93473981 + B4A SINE B4 2 137 -87 4 1143 258 274 16 16 chrX 73176843 73176906 -93473390 + ID4 SINE ID 3 65 -18 4 1143 254 207 0 79 chrX 73177123 73177186 -93473110 - B4A SINE B4 0 292 235 4 1143 460 276 115 20 chrX 73177225 73177373 -93472923 - RSINE1 SINE B4 0 165 4 4 1143 678 350 16 8 chrX 73177373 73177601 -93472695 - B4A SINE B4 -61 231 2 4 1143 22 35 0 0 chrX 73177637 73177666 -93472630 + AT_rich Low_complexity Low_complexity 1 29 0 4 1143 243 0 0 0 chrX 73177679 73177706 -93472590 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1143 417 274 0 36 chrX 73177712 73177822 -93472474 - B3 SINE B2 -110 106 1 4 1143 443 314 72 7 chrX 73177962 73178100 -93472196 - B1F1 SINE Alu -2 147 1 4 1143 335 314 64 86 chrX 73178233 73178453 -93471843 + ORR1E LTR MaLR 1 215 -144 4 1143 2494 77 116 11 chrX 73178537 73178890 -93471406 - RLTR10 LTR ERVK 0 390 1 4 1143 973 228 19 15 chrX 73179160 73179365 -93470931 + ID_B1 SINE B4 2 207 -17 4 1143 222 37 0 0 chrX 73179403 73179430 -93470866 + (TAGG)n Simple_repeat Simple_repeat 1 27 0 4 1143 485 244 210 8 chrX 73179745 73179869 -93470427 - B3 SINE B2 -65 151 3 4 1143 213 360 99 22 chrX 73179895 73179986 -93470310 - B1F SINE Alu -51 98 1 4 1143 235 239 65 0 chrX 73180145 73180191 -93470105 + ID_B1 SINE B4 159 207 -17 4 1143 180 200 0 0 chrX 73180314 73180354 -93469942 + CT-rich Low_complexity Low_complexity 2 41 0 4 1143 464 247 26 58 chrX 73181326 73181481 -93468815 - B3 SINE B2 -7 209 60 4 1143 2085 158 34 13 chrX 73181486 73181864 -93468432 + ORR1B1 LTR MaLR 1 386 -8 4 1143 518 293 30 65 chrX 73181869 73182037 -93468259 - B3A SINE B2 -7 209 48 4 1143 21205 28 0 0 chrX 73182039 73185175 -93465121 - L1Md_T LINE L1 0 6582 3446 4 1143 34858 38 46 3 chrX 73185172 73191105 -93459191 - L1Md_A LINE L1 -1 6584 281 4 1143 222 37 0 0 chrX 73191149 73191176 -93459120 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 4 1143 2819 115 7 29 chrX 73191176 73191295 -93459001 - Lx2A LINE L1 -9 6999 6880 4 1143 1620 121 188 10 chrX 73191295 73191588 -93458708 + IAPLTR4 LTR ERVK 1 345 0 4 1143 2819 115 7 29 chrX 73191588 73191889 -93458407 - Lx2A LINE L1 -129 6879 6588 4 1143 820 261 48 0 chrX 73191952 73192140 -93458156 + ID_B1 SINE B4 16 212 -12 4 1143 211 143 200 20 chrX 73192407 73192457 -93457839 - RSINE1 SINE B4 -28 137 79 4 1143 1771 246 65 12 chrX 73192458 73192886 -93457410 + Lx6 LINE L1 6831 7281 -179 5 1143 387 0 0 0 chrX 73192917 73192960 -93457336 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 5 1143 519 273 7 65 chrX 73192971 73193124 -93457172 - RSINE1 SINE B4 -17 148 5 5 1143 618 221 36 14 chrX 73193166 73193304 -93456992 - B1_Mm SINE Alu -2 145 5 5 1143 334 282 0 0 chrX 73193427 73193498 -93456798 - B1F SINE Alu -58 91 21 5 1143 23 0 0 0 chrX 73193759 73193782 -93456514 + AT_rich Low_complexity Low_complexity 1 23 0 5 1143 1834 140 0 51 chrX 73193789 73194104 -93456192 - Lx3B LINE L1 -3 6970 6672 5 1143 586 184 417 121 chrX 73194345 73194589 -93455707 - ORR1C1 LTR MaLR -2 376 37 5 1143 1180 75 7 0 chrX 73194589 73194736 -93455560 - B1_Mus1 SINE Alu 0 148 1 5 1143 586 184 417 121 chrX 73194736 73194781 -93455515 - ORR1C1 LTR MaLR -342 36 1 5 1143 258 255 0 0 chrX 73194796 73194843 -93455453 - B1_Mur1 SINE Alu -11 138 92 5 1143 186 43 0 0 chrX 73194944 73194967 -93455329 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1143 236 131 0 21 chrX 73194984 73195031 -93455265 + GA-rich Low_complexity Low_complexity 2 47 0 5 1143 405 337 70 35 chrX 73195046 73195218 -93455078 - LTR16A1 LTR ERVL -267 189 12 5 1143 248 154 0 19 chrX 73195281 73195334 -93454962 + GA-rich Low_complexity Low_complexity 4 55 0 5 1143 207 100 0 0 chrX 73195372 73195402 -93454894 + (GGGA)n Simple_repeat Simple_repeat 4 33 0 5 1143 232 357 12 0 chrX 73195436 73195520 -93454776 - MER5A DNA MER1_type -104 85 1 5 1143 318 260 73 0 chrX 73195587 73195683 -93454613 - MER53 DNA hAT 0 193 91 5 1143 265 305 61 40 chrX 73195824 73195923 -93454373 + PB1D9 SINE Alu 6 106 -14 5 1143 512 0 50 25 chrX 73195925 73196005 -93454291 + (CAAAA)n Simple_repeat Simple_repeat 2 83 0 5 1143 521 299 96 9 chrX 73196243 73196472 -93453824 + L1MCa LINE L1 5 253 -6255 5 1143 38741 44 1 3 chrX 73196479 73202746 -93447550 + L1Md_T LINE L1 73 6426 -159 5 1143 2637 26 2 209 chrX 73202750 73203234 -93447062 - RLTR10 LTR ERVK -6 384 1 5 1143 8777 20 2 3 chrX 73203236 73204232 -93446064 - RLTR10-int LTR ERVK -3 1984 990 5 1143 8286 31 4 0 chrX 73204310 73205265 -93445031 - RLTR10-int LTR ERVK -999 988 1 5 1143 2929 39 2 207 chrX 73205267 73205755 -93444541 - RLTR10 LTR ERVK -2 388 1 5 1143 1225 103 0 0 chrX 73205755 73205920 -93444376 + L1Md_T LINE L1 6418 6582 0 5 1143 297 284 10 40 chrX 73206061 73206160 -93444136 + PB1 SINE Alu 29 124 -3 5 1143 398 248 8 42 chrX 73206351 73206469 -93443827 + L1MCa LINE L1 520 633 -5875 5 1143 203 42 39 59 chrX 73206549 73206600 -93443696 + (TTTTTG)n Simple_repeat Simple_repeat 6 55 0 5 1143 312 304 25 0 chrX 73206793 73206872 -93443424 + ID4_ SINE ID 2 82 -1 5 1143 252 286 24 89 chrX 73206922 73207045 -93443251 + L1MC1 LINE L1 5840 5954 -379 5 1143 6054 94 22 11 chrX 73207042 73208680 -93441616 + L1VL2 LINE L1 172 1827 -1788 5 1143 288 270 0 0 chrX 73208817 73208891 -93441405 - PB1D10 SINE Alu -2 115 42 5 1143 24 85 0 0 chrX 73209606 73209665 -93440631 + AT_rich Low_complexity Low_complexity 1 59 0 5 1143 33 73 0 0 chrX 73209743 73209811 -93440485 + AT_rich Low_complexity Low_complexity 1 68 0 5 1143 566 280 93 0 chrX 73210412 73210626 -93439670 + L1MC1 LINE L1 5937 6170 -163 5 1143 25 0 0 0 chrX 73211056 73211081 -93439215 + GC_rich Low_complexity Low_complexity 1 25 0 5 1143 231 36 0 0 chrX 73211743 73211771 -93438525 + (CCG)n Simple_repeat Simple_repeat 2 29 0 5 1143 229 245 20 0 chrX 73213118 73213167 -93437129 - ID4 SINE ID -32 51 2 5 1143 642 171 0 0 chrX 73213407 73213530 -93436766 + (TGGA)n Simple_repeat Simple_repeat 1 123 0 5 1143 447 160 33 11 chrX 73213877 73213992 -93436304 + Lx LINE L1 6495 6642 -12 5 1143 2251 120 6 9 chrX 73213992 73214336 -93435960 - RMER17D LTR ERVK 0 889 547 5 1143 3005 40 29 0 chrX 73214336 73214685 -93435611 + L1_Mus1 LINE L1 6209 6567 0 5 1143 3460 75 7 88 chrX 73215056 73215657 -93434639 - RMER17D LTR ERVK -337 552 1 5 1143 254 171 0 0 chrX 73215696 73215737 -93434559 - B3A SINE B2 -153 45 5 5 1143 267 288 50 7 chrX 73215809 73215949 -93434347 - Charlie2b DNA MER1_type -238 2544 2399 5 1143 5436 74 3 3 chrX 73216015 73216690 -93433606 - L1_Mus3 LINE L1 -5 6633 5959 5 1143 393 299 132 32 chrX 73218675 73219076 -93431220 - Charlie2b DNA MER1_type -528 2254 1814 5 1143 244 273 291 7 chrX 73219120 73219271 -93431025 - Charlie2b DNA MER1_type -2468 314 121 5 1143 518 258 136 0 chrX 73219314 73219469 -93430827 + ID_B1 SINE B4 3 178 -46 5 1143 844 199 7 0 chrX 73219533 73219674 -93430622 - B1_Mur4 SINE Alu -7 143 2 5 1143 316 275 0 59 chrX 73219721 73219806 -93430490 - ID4_ SINE ID -2 81 2 5 1143 423 0 0 0 chrX 73220384 73220431 -93429865 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1143 369 0 0 0 chrX 73220537 73220578 -93429718 + (TC)n Simple_repeat Simple_repeat 1 41 0 5 1143 409 306 73 15 chrX 73220603 73220739 -93429557 - ID_B1 SINE B4 -8 216 73 5 1143 884 245 50 10 chrX 73220778 73220980 -93429316 - B3 SINE B2 -6 210 1 5 1143 776 152 91 6 chrX 73221221 73221386 -93428910 - Lx9 LINE L1 -2 7642 7464 5 1143 300 333 11 0 chrX 73221769 73221859 -93428437 - MTEa LTR MaLR -6 373 283 5 1143 726 193 7 28 chrX 73221861 73222005 -93428291 + URR1B DNA MER1_type 1 141 -84 5 1143 962 293 23 8 chrX 73222039 73222297 -93427999 - MTEa LTR MaLR -117 262 1 5 1143 550 216 8 33 chrX 73222876 73222996 -93427300 + ID_B1 SINE B4 104 220 -4 5 1143 211 178 64 43 chrX 73222955 73223002 -93427294 + PB1D7 SINE Alu 73 120 0 5 1143 3816 183 61 73 chrX 73224386 73225299 -93424997 - RMER19B LTR ERVK 0 902 1 5 1143 3337 39 17 10 chrX 73225430 73225845 -93424451 + L1Md_F3 LINE L1 6166 6583 -1 5 1143 1887 174 25 14 chrX 73225938 73226299 -93423997 + ORR1B2 LTR MaLR 1 365 -2 5 1143 721 283 143 13 chrX 73226564 73226865 -93423431 - Lx8 LINE L1 -5 7468 7129 5 1143 589 292 0 0 chrX 73227234 73227378 -93422918 - ID_B1 SINE B4 0 224 81 5 1143 391 295 147 30 chrX 73227391 73227786 -93422510 - L1MB8 LINE L1 -63 6115 5675 5 1143 405 268 41 0 chrX 73227807 73227904 -93422392 - B4A SINE B4 -191 101 1 5 1143 3873 142 51 8 chrX 73227968 73228612 -93421684 + RMER19A LTR ERVK 1 672 -65 5 1143 212 170 19 0 chrX 73228638 73228691 -93421605 + (TTAA)n Simple_repeat Simple_repeat 1 54 0 5 1143 566 59 141 0 chrX 73228720 73228805 -93421491 + RMER19A LTR ERVK 641 737 0 5 1143 366 304 7 0 chrX 73228922 73229060 -93421236 - L1MC2 LINE L1 -106 6238 6100 5 1143 288 340 38 19 chrX 73229086 73229191 -93421105 - PB1D9 SINE Alu -2 118 12 5 1143 658 229 7 7 chrX 73229275 73229420 -93420876 - B1_Mur3 SINE Alu 0 149 5 5 1143 335 227 13 13 chrX 73229731 73229807 -93420489 + ID4 SINE ID 1 76 -7 5 1143 263 85 21 0 chrX 73229828 73229875 -93420421 + (TTAA)n Simple_repeat Simple_repeat 1 48 0 5 1143 514 252 32 0 chrX 73229876 73229999 -93420297 - B1F1 SINE Alu -19 130 4 5 1143 244 0 56 0 chrX 73230116 73230152 -93420144 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 5 1143 1100 82 0 27 chrX 73230158 73230308 -93419988 - B1_Mm SINE Alu 0 147 2 5 1143 306 314 27 80 chrX 73230370 73230557 -93419739 - MER5A DNA MER1_type -9 180 4 5 1143 288 0 0 0 chrX 73231164 73231196 -93419100 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 5 1143 757 294 12 4 chrX 73231282 73231538 -93418758 + Lx7 LINE L1 7043 7300 -396 5 1143 411 258 107 8 chrX 73231582 73231703 -93418593 + ID_B1 SINE B4 1 133 -91 5 1143 385 317 41 91 chrX 73232051 73232270 -93418026 + MLT1L LTR MaLR 321 528 -82 5 1143 890 85 0 8 chrX 73232359 73232489 -93417807 + (TTCC)n Simple_repeat Simple_repeat 1 129 0 5 1143 537 269 139 29 chrX 73233421 73233666 -93416630 + B4A SINE B4 2 273 -19 5 1143 526 321 69 134 chrX 73233980 73234075 -93416221 + B4A SINE B4 1 95 -197 5 1143 635 270 34 24 chrX 73234075 73234284 -93416012 + B3 SINE B2 1 211 -5 5 1143 526 321 69 134 chrX 73234284 73234479 -93415817 + B4A SINE B4 96 272 -20 5 1143 252 77 0 0 chrX 73234508 73234547 -93415749 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1143 391 246 0 0 chrX 73234551 73234620 -93415676 + RSINE1 SINE B4 23 91 -74 5 1143 23 0 0 0 chrX 73234678 73234701 -93415595 + AT_rich Low_complexity Low_complexity 1 23 0 5 1143 221 322 57 33 chrX 73234708 73234830 -93415466 - L2 LINE L2 -420 2999 2875 5 1143 3471 166 142 14 chrX 73234837 73235550 -93414746 - RMER19B LTR ERVK 0 902 99 5 1143 747 334 143 45 chrX 73235579 73236417 -93413879 - L2 LINE L2 -573 2846 1927 5 1143 473 300 29 107 chrX 73236501 73236744 -93413552 + B4A SINE B4 48 271 -21 5 1143 741 96 0 0 chrX 73236745 73236870 -93413426 + (TC)n Simple_repeat Simple_repeat 1 125 0 5 1143 189 0 0 0 chrX 73236870 73236890 -93413406 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 1143 333 240 0 13 chrX 73237574 73237650 -93412646 + B1_Mus2 SINE Alu 72 146 -1 5 1143 3347 186 45 154 chrX 73237889 73238483 -93411813 + RMER19B LTR ERVK 1 576 -326 5 1143 1200 48 0 0 chrX 73238483 73238628 -93411668 - B1_Mus1 SINE Alu 0 148 4 5 1143 3347 186 45 154 chrX 73238628 73239045 -93411251 + RMER19B LTR ERVK 577 901 -1 5 1143 1026 205 47 0 chrX 73239146 73239336 -93410960 - B3 SINE B2 -11 205 7 5 1143 21 0 0 0 chrX 73239336 73239357 -93410939 + AT_rich Low_complexity Low_complexity 1 21 0 5 1143 925 116 24 6 chrX 73240381 73240546 -93409750 + Lx LINE L1 6486 6653 -1 5 1143 256 276 0 0 chrX 73240700 73240758 -93409538 - Lx5 LINE L1 -76 6974 6917 5 1143 36 62 0 0 chrX 73240758 73240822 -93409474 + AT_rich Low_complexity Low_complexity 1 64 0 5 1143 540 0 0 0 chrX 73240860 73240920 -93409376 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 1143 502 291 17 0 chrX 73241460 73241577 -93408719 - B1F1 SINE Alu -8 141 23 5 1143 324 237 26 0 chrX 73241653 73241729 -93408567 - ID2 SINE ID -5 78 1 5 1143 26 0 0 0 chrX 73241868 73241894 -93408402 + AT_rich Low_complexity Low_complexity 1 26 0 5 1143 267 333 0 0 chrX 73242004 73242067 -93408229 - ID_B1 SINE B4 -80 144 82 5 1143 300 261 0 0 chrX 73242322 73242387 -93407909 - RMER15 LTR ERVL -108 467 403 6 1143 1107 189 51 0 chrX 73242433 73242629 -93407667 - B3 SINE B2 -10 206 1 6 1143 402 344 54 36 chrX 73242795 73242961 -93407335 + ID_B1 SINE B4 2 170 -54 6 1143 268 296 32 74 chrX 73242883 73242978 -93407318 + PB1D10 SINE Alu 18 108 -9 6 1143 221 57 29 0 chrX 73242980 73243015 -93407281 + (CAA)n Simple_repeat Simple_repeat 2 37 0 6 1143 3925 131 133 9 chrX 73243028 73243684 -93406612 - RMER19A LTR ERVK 0 737 1 6 1143 1501 156 136 57 chrX 73243744 73244098 -93406198 - RLTR14 LTR ERV1 0 382 1 6 1143 874 213 69 10 chrX 73245335 73245539 -93404757 + B3 SINE B2 1 216 0 6 1143 437 0 19 0 chrX 73245660 73245713 -93404583 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1143 260 377 120 34 chrX 73245968 73246292 -93404004 - L2a LINE L2 -9 3417 3066 6 1143 342 0 0 0 chrX 73246409 73246447 -93403849 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1143 25380 111 10 14 chrX 73246623 73251505 -93398791 + L1_Mus1 LINE L1 1717 6567 0 6 1143 829 116 23 0 chrX 73251964 73252093 -93398203 - RMER19A LTR ERVK 0 737 606 6 1143 180 111 0 0 chrX 73252093 73252120 -93398176 + (TA)n Simple_repeat Simple_repeat 1 27 0 6 1143 396 0 0 0 chrX 73252120 73252163 -93398133 + (GA)n Simple_repeat Simple_repeat 2 45 0 6 1143 237 388 16 16 chrX 73253382 73253505 -93396791 - Cheshire DNA MER1_type -2134 286 164 6 1143 877 303 7 31 chrX 73253569 73253862 -93396434 - B4A SINE B4 -5 287 2 6 1143 401 328 62 67 chrX 73253888 73254081 -93396215 - B3A SINE B2 -6 192 1 6 1143 730 251 134 0 chrX 73254116 73254303 -93395993 - B3 SINE B2 -2 214 3 6 1143 207 0 0 0 chrX 73254455 73254478 -93395818 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 6 1143 334 229 104 24 chrX 73254913 73255038 -93395258 - MIRb SINE MIR -121 147 13 6 1143 419 380 38 19 chrX 73256053 73256262 -93394034 - MamGypLTR1c LTR Gypsy -227 576 364 6 1143 409 255 18 36 chrX 73256306 73256416 -93393880 + PB1D10 SINE Alu 10 117 0 6 1143 215 79 0 26 chrX 73256441 73256480 -93393816 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 6 1143 2597 214 101 75 chrX 73256487 73257334 -93392962 + RLTR13D6 LTR ERVK 1 869 -33 6 1143 2531 175 149 4 chrX 73257334 73257879 -93392417 - RLTR1 LTR ERV1 0 624 1 6 1143 240 61 0 0 chrX 73257879 73257908 -93392388 + RLTR13A LTR ERVK 827 855 0 6 1143 229 0 0 77 chrX 73257919 73257958 -93392338 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 6 1143 299 327 38 9 chrX 73258066 73258171 -93392125 + PB1D10 SINE Alu 5 112 -5 6 1143 270 205 50 33 chrX 73258337 73258458 -93391838 + Lx9 LINE L1 7521 7643 -1 6 1143 741 277 18 23 chrX 73259270 73259488 -93390808 - ID_B1 SINE B4 -6 218 2 6 1143 22 35 0 0 chrX 73259497 73259526 -93390770 + AT_rich Low_complexity Low_complexity 1 29 0 6 1143 400 309 36 0 chrX 73259549 73259659 -93390637 - PB1 SINE Alu -10 117 4 6 1143 650 144 9 0 chrX 73259798 73259909 -93390387 - URR1A DNA MER1_type -36 190 79 6 1143 428 233 88 11 chrX 73260166 73260348 -93389948 + L1ME4a LINE L1 5714 5909 -215 6 1143 24 0 0 0 chrX 73260363 73260387 -93389909 + AT_rich Low_complexity Low_complexity 1 24 0 6 1143 888 209 119 0 chrX 73260485 73260686 -93389610 + URR1A DNA MER1_type 2 226 0 6 1143 236 361 94 51 chrX 73260712 73260966 -93389330 - MLT1L LTR MaLR -173 437 173 6 1143 2090 47 0 11 chrX 73261532 73261792 -93388504 + L1_Mus1 LINE L1 6309 6565 -2 6 1143 2208 98 126 6 chrX 73262046 73262394 -93387902 - RLTR10 LTR ERVK 0 390 1 6 1143 421 321 64 64 chrX 73262398 73262681 -93387615 - B4A SINE B4 -8 284 2 6 1143 1994 102 0 103 chrX 73263074 73263135 -93387161 - ORR1A2 LTR MaLR -13 314 273 6 1143 2137 102 49 3 chrX 73263135 73263461 -93386835 - L1_Mus3 LINE L1 -4 6634 6294 6 1143 1994 102 0 103 chrX 73263461 73263749 -93386547 - ORR1A2 LTR MaLR -55 272 1 6 1143 286 311 83 19 chrX 73265470 73265578 -93384718 - PB1 SINE Alu -7 120 6 6 1143 279 133 0 0 chrX 73265969 73266014 -93384282 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1143 722 340 8 12 chrX 73266058 73266299 -93383997 - B4 SINE B4 -4 288 49 6 1143 256 332 140 26 chrX 73267533 73267693 -93382603 - MIRb SINE MIR -71 197 13 6 1143 215 294 129 0 chrX 73267727 73267812 -93382484 + BC1_Mm scRNA scRNA 1 96 -56 6 1143 337 374 42 77 chrX 73267838 73268006 -93382290 - RSINE1 SINE B4 0 165 4 6 1143 248 311 47 33 chrX 73268081 73268443 -93381853 - L1ME3B LINE L1 -310 5930 5564 6 1143 605 311 16 28 chrX 73268519 73268701 -93381595 - B3A SINE B2 -16 182 3 6 1143 300 177 0 0 chrX 73268784 73268846 -93381450 - Lx6 LINE L1 -4 7456 7395 6 1143 320 353 16 0 chrX 73268857 73268978 -93381318 + B3A SINE B2 80 204 -12 6 1143 227 54 27 0 chrX 73268984 73269021 -93381275 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 142 2980 134 6 10 chrX 73269037 73269550 -93380746 + L1Md_F2 LINE L1 5076 5586 -297 6 1144 7983 48 3 0 chrX 73269551 73270530 -93379766 + L1Md_F2 LINE L1 5588 6569 -13 6 1144 397 328 23 8 chrX 73270646 73270775 -93379521 - ID_B1 SINE B4 -6 218 88 6 1144 1232 157 97 10 chrX 73270839 73271129 -93379167 + Lx9 LINE L1 7329 7643 -1 6 1144 642 87 0 19 chrX 73271889 73271994 -93378302 - L1Md_F2 LINE L1 -12 6570 6468 6 1144 248 53 26 0 chrX 73272676 73272714 -93377582 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 1144 642 212 7 29 chrX 73272720 73272856 -93377440 - B1_Mur3 SINE Alu -15 134 2 6 1144 258 232 24 35 chrX 73273997 73274082 -93376214 - MLT1A1 LTR MaLR -7 401 318 6 1144 351 141 0 0 chrX 73274262 73274326 -93375970 + (TC)n Simple_repeat Simple_repeat 1 64 0 6 1144 302 336 116 30 chrX 73274731 73274964 -93375332 - L1MD2 LINE L1 -91 6268 6016 6 1144 289 216 57 0 chrX 73274987 73275075 -93375221 - L1MD2 LINE L1 -262 5980 5888 6 1144 243 271 0 0 chrX 73275286 73275334 -93374962 - ID4_ SINE ID -1 82 35 6 1144 191 349 37 52 chrX 73275770 73275906 -93374390 + MIR3 SINE MIR 54 187 -21 6 1144 218 402 107 0 chrX 73276475 73276587 -93373709 + PB1 SINE Alu 2 125 -2 6 1144 258 32 0 0 chrX 73276761 73276792 -93373504 + (TA)n Simple_repeat Simple_repeat 2 32 0 6 1144 3012 219 36 49 chrX 73276794 73277322 -93372974 - Lx9 LINE L1 -172 7472 6951 6 1144 1868 198 66 8 chrX 73277322 73277714 -93372582 + MTC LTR MaLR 5 419 -2 6 1144 3012 219 36 49 chrX 73277714 73278024 -93372272 - Lx9 LINE L1 -694 6950 6645 6 1144 4531 128 40 31 chrX 73278096 73279417 -93370879 + L1Md_F LINE L1 237 1565 -4318 6 1144 958 182 66 0 chrX 73279417 73279615 -93370681 + Lx2B LINE L1 6786 6996 -4 6 1144 238 207 29 155 chrX 73279866 73279969 -93370327 + MLT1B LTR MaLR 263 352 -38 6 1144 358 325 107 8 chrX 73280036 73280278 -93370018 + MARNA DNA Mariner 187 452 -134 6 1144 513 135 0 22 chrX 73280972 73281063 -93369233 + ORR1A3 LTR MaLR 6 94 -232 6 1144 9568 104 5 4 chrX 73281063 73283198 -93367098 - L1Md_F2 LINE L1 -19 6563 4427 6 1144 30960 99 33 11 chrX 73283269 73289680 -93360616 - L1Md_F3 LINE L1 -2 6582 31 6 1144 607 277 0 0 chrX 73289680 73289839 -93360457 - L1M4 LINE L1 -566 5608 5450 6 1144 656 290 38 10 chrX 73289958 73290167 -93360129 + ID_B1 SINE B4 3 217 -7 6 1144 2372 242 187 42 chrX 73290180 73290900 -93359396 + Lx6 LINE L1 5909 6742 -718 6 1144 243 0 0 0 chrX 73290900 73290927 -93359369 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1144 2372 239 109 45 chrX 73290927 73290997 -93359299 + Lx6 LINE L1 6743 6811 -649 6 1144 1575 144 45 71 chrX 73290997 73291333 -93358963 - ORR1A4 LTR MaLR -2 327 1 6 1144 2372 239 109 45 chrX 73291333 73291353 -93358943 + Lx6 LINE L1 6812 6830 -630 6 1144 10883 22 0 0 chrX 73291774 73293781 -93356515 - L1Md_T LINE L1 -1 6581 4575 6 1144 630 40 50 0 chrX 73293787 73293886 -93356410 - L1_Mus4 LINE L1 -5 6631 6528 6 1144 1134 155 0 0 chrX 73293886 73294092 -93356204 + L1_Mm LINE L1 4522 4727 -1156 6 1144 707 261 102 34 chrX 73294092 73294358 -93355938 - MTEa LTR MaLR -38 341 58 6 1144 423 0 0 0 chrX 73294433 73294480 -93355816 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 1144 406 367 40 13 chrX 73294484 73294633 -93355663 - RSINE1 SINE B4 -12 153 1 6 1144 403 331 95 74 chrX 73294727 73294916 -93355380 + B3A SINE B2 1 193 -5 6 1144 31 0 0 0 chrX 73294920 73294951 -93355345 + AT_rich Low_complexity Low_complexity 1 31 0 6 1144 272 164 73 37 chrX 73294952 73295034 -93355262 - Lx3A LINE L1 -7 6974 6890 6 1144 212 206 56 56 chrX 73295207 73295279 -93355017 + MIRc SINE MIR 5 76 -192 6 1144 494 253 254 21 chrX 73295484 73295773 -93354523 - MTD LTR MaLR -14 405 46 6 1144 7730 46 2 1 chrX 73296483 73297562 -93352734 - L1Md_F2 LINE L1 -12 6570 5492 6 1144 212 200 11 34 chrX 73297816 73297904 -93352392 + CT-rich Low_complexity Low_complexity 2 87 0 6 1144 382 327 0 0 chrX 73297906 73298016 -93352280 - PB1D10 SINE Alu -7 110 1 6 1144 186 43 0 0 chrX 73298328 73298351 -93351945 + (TC)n Simple_repeat Simple_repeat 2 24 0 6 1144 1160 62 0 0 chrX 73298858 73299004 -93351292 + B1_Mm SINE Alu 2 147 0 6 1144 229 333 58 0 chrX 73299060 73299129 -93351167 + ID4 SINE ID 2 74 -9 6 1144 372 155 0 0 chrX 73299187 73299258 -93351038 + (TAGA)n Simple_repeat Simple_repeat 3 73 0 6 1144 302 310 0 11 chrX 73300669 73300757 -93349539 + B4A SINE B4 10 96 -196 6 1144 1040 38 8 0 chrX 73300939 73301072 -93349224 + (GGGAGA)n Simple_repeat Simple_repeat 6 139 0 7 1144 689 242 15 2 chrX 73301146 73301318 -93348978 + ORR1D1-int LTR MaLR 135 308 -1655 7 1144 448 186 12 0 chrX 73301329 73301415 -93348881 + ORR1D1-int LTR MaLR 565 651 -719 7 1144 5424 86 2 4 chrX 73301418 73302470 -93347826 - L1_Mus2 LINE L1 -461 6105 5057 7 1144 2874 98 5 2 chrX 73302470 73302891 -93347405 + L1_Mus2 LINE L1 6117 6538 -28 7 1144 4574 57 0 2 chrX 73302892 73303469 -93346827 - L1Md_F2 LINE L1 -2 6580 6005 7 1144 11560 32 5 0 chrX 73303475 73305568 -93344728 - L1Md_T LINE L1 -14 6568 4465 7 1144 6202 50 3 0 chrX 73305541 73306500 -93343796 - L1Md_F2 LINE L1 -552 6030 5069 7 1144 31495 92 5 11 chrX 73306500 73311909 -93338387 - L1Md_A LINE L1 -78 5805 217 7 1144 246 143 0 0 chrX 73311902 73311951 -93338345 + L1_Mus4 LINE L1 6581 6629 -7 7 1144 1541 37 16 0 chrX 73311979 73312167 -93338129 + B2_Mm1t SINE B2 1 191 -2 7 1144 2581 251 55 75 chrX 73312178 73312419 -93337877 + ORR1D1-int LTR MaLR 640 886 -484 7 1144 353 86 0 0 chrX 73312419 73312477 -93337819 + L1_Mus3 LINE L1 6578 6635 -3 7 1144 2581 251 55 75 chrX 73312477 73312981 -93337315 + ORR1D1-int LTR MaLR 887 1370 0 7 1144 978 256 127 0 chrX 73312981 73313313 -93336983 + ORR1D1 LTR MaLR 1 374 0 7 1144 23 33 0 0 chrX 73314126 73314156 -93336140 + AT_rich Low_complexity Low_complexity 1 30 0 7 1144 24 32 0 0 chrX 73314765 73314796 -93335500 + AT_rich Low_complexity Low_complexity 1 31 0 7 1144 689 241 61 42 chrX 73314796 73315008 -93335288 - ID_B1 SINE B4 -7 217 2 7 1144 228 67 0 0 chrX 73315338 73315368 -93334928 + (TTTTC)n Simple_repeat Simple_repeat 1 30 0 7 1144 1162 82 0 0 chrX 73315368 73315514 -93334782 - B1_Mus2 SINE Alu -1 146 1 7 1144 258 316 0 0 chrX 73316119 73316198 -93334098 + ID4 SINE ID 1 79 -4 7 1144 252 0 0 0 chrX 73316198 73316226 -93334070 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 7 1144 3562 97 76 2 chrX 73316276 73316801 -93333495 - L1_Mus3 LINE L1 -5 6633 6070 7 1144 264 59 0 0 chrX 73316909 73316943 -93333353 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 1144 189 237 0 0 chrX 73316977 73317036 -93333260 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1144 477 245 46 25 chrX 73317095 73317292 -93333004 - L1MB8 LINE L1 -263 5915 5715 7 1144 237 286 0 16 chrX 73317293 73317357 -93332939 + (TG)n Simple_repeat Simple_repeat 1 63 0 7 1144 415 364 90 24 chrX 73317369 73317580 -93332716 - B4A SINE B4 -20 272 48 7 1144 1281 92 27 11 chrX 73317712 73317898 -93332398 - B2_Mm2 SINE B2 -6 189 1 7 1144 4314 116 11 17 chrX 73318340 73318996 -93331300 - Lx3A LINE L1 -3 6978 6327 7 1144 727 321 28 14 chrX 73319331 73319543 -93330753 + ID_B1 SINE B4 1 215 -9 7 1144 9336 91 7 21 chrX 73319602 73321471 -93328825 - Lx3_Mus LINE L1 0 7009 5169 7 1144 962 86 0 0 chrX 73321638 73321766 -93328530 + B1_Mus1 SINE Alu 21 148 0 7 1144 303 254 72 93 chrX 73321644 73321783 -93328513 + B4A SINE B4 111 246 -46 7 1144 834 256 11 59 chrX 73322758 73323044 -93327252 + Lx9 LINE L1 6858 7129 -515 7 1144 201 158 0 0 chrX 73323735 73323773 -93326523 + A-rich Low_complexity Low_complexity 1 38 0 7 1144 372 192 12 25 chrX 73323886 73323966 -93326330 + MER20 DNA MER1_type 2 80 -139 7 1144 450 0 0 0 chrX 73324084 73324134 -93326162 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 1144 403 47 0 15 chrX 73324315 73324380 -93325916 - L1Md_F2 LINE L1 0 6582 6519 7 1144 489 286 165 13 chrX 73324754 73324991 -93325305 - B4A SINE B4 -18 274 2 7 1144 830 170 12 0 chrX 73325104 73325269 -93325027 + CT-rich Low_complexity Low_complexity 2 168 0 7 1144 1213 63 0 0 chrX 73325269 73325427 -93324869 + L1_Mus2 LINE L1 6409 6566 0 7 1144 248 130 22 0 chrX 73325476 73325522 -93324774 + (TTA)n Simple_repeat Simple_repeat 3 49 0 7 1144 274 202 20 101 chrX 73325986 73326085 -93324211 + RMER15 LTR ERVL 1 91 -484 7 1144 244 226 0 19 chrX 73326355 73326409 -93323887 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1144 260 182 0 83 chrX 73326410 73326482 -93323814 + L1MD LINE L1 5233 5298 -848 7 1144 854 206 29 23 chrX 73326631 73326805 -93323491 + B2_Mm2 SINE B2 1 175 -20 7 1144 324 333 86 0 chrX 73327322 73327427 -93322869 - PB1D10 SINE Alu 0 117 4 7 1144 450 143 0 0 chrX 73327565 73327642 -93322654 + (TG)n Simple_repeat Simple_repeat 1 77 0 7 1144 186 189 0 0 chrX 73327881 73327918 -93322378 + A-rich Low_complexity Low_complexity 3 39 0 7 1144 360 0 0 0 chrX 73329016 73329056 -93321240 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 1144 1104 104 110 0 chrX 73329453 73329482 -93320814 - B2_Mm2 SINE B2 -1 194 156 7 1144 399 89 0 0 chrX 73329482 73329538 -93320758 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 1144 1104 104 110 0 chrX 73329538 73329681 -93320615 - B2_Mm2 SINE B2 -40 155 5 7 1144 414 0 0 0 chrX 73330273 73330319 -93319977 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 7 1144 223 328 158 8 chrX 73330950 73331070 -93319226 - MIRc SINE MIR -126 142 5 7 1144 315 0 0 0 chrX 73331209 73331244 -93319052 + (T)n Simple_repeat Simple_repeat 1 35 0 7 1144 1044 205 37 0 chrX 73331654 73331869 -93318427 - URR1B DNA MER1_type -1 224 2 7 1144 351 0 0 0 chrX 73331964 73332003 -93318293 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 1144 315 0 0 0 chrX 73332003 73332037 -93318259 + (GA)n Simple_repeat Simple_repeat 1 35 0 7 1144 6147 43 0 0 chrX 73332261 73332999 -93317297 + L1Md_T LINE L1 5845 6582 0 7 1144 351 0 0 0 chrX 73333360 73333399 -93316897 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 7 1144 489 256 92 39 chrX 73333518 73333648 -93316648 - B4 SINE B4 -155 137 1 7 1144 3294 192 98 46 chrX 73333803 73334649 -93315647 - RMER19B LTR ERVK -12 890 1 7 1144 608 189 82 15 chrX 73335696 73335830 -93314466 + B1_Mur1 SINE Alu 3 145 -4 7 1144 495 279 101 26 chrX 73336052 73336293 -93314003 - MLT1J LTR MaLR 0 610 243 7 1144 1740 134 13 142 chrX 73336477 73336948 -93313348 + RMER17C LTR ERVK 1 410 0 7 1144 1992 173 22 53 chrX 73337847 73338299 -93311997 + RMER10A LTR ERVL 3 440 -2 7 1144 341 306 103 54 chrX 73338669 73338911 -93311385 - Lx8 LINE L1 -6 7467 7214 7 1144 184 328 43 43 chrX 73339370 73339440 -93310856 - MIR SINE MIR -159 103 34 7 1144 237 293 0 0 chrX 73339504 73339579 -93310717 - L1MC5 LINE L1 -80 7881 7807 7 1144 3762 32 40 63 chrX 73340492 73340997 -93309299 + MT2_Mm LTR ERVL 1 493 0 7 1144 354 45 0 0 chrX 73341110 73341154 -93309142 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 7 1144 21 0 0 0 chrX 73341481 73341502 -93308794 + AT_rich Low_complexity Low_complexity 1 21 0 7 1144 293 244 10 91 chrX 73341515 73341614 -93308682 - B4A SINE B4 0 292 202 7 1144 426 327 144 37 chrX 73341616 73341992 -93308304 + Cheshire DNA MER1_type 113 530 -1890 7 1144 3913 139 10 14 chrX 73341992 73342612 -93307684 - Lx4A LINE L1 -2 7056 6440 7 1144 2116 159 31 34 chrX 73342660 73342748 -93307548 + ORR1B1 LTR MaLR 1 90 -304 7 1144 1141 69 7 0 chrX 73342748 73342892 -93307404 + B1_Mus2 SINE Alu 2 146 -1 7 1144 2116 159 31 34 chrX 73342892 73343186 -93307110 + ORR1B1 LTR MaLR 91 382 -12 7 1144 328 341 112 45 chrX 73343323 73343501 -93306795 - ORR1E LTR MaLR -168 191 2 7 1144 1315 264 91 39 chrX 73343512 73344020 -93306276 + Cheshire DNA MER1_type 525 1058 -1362 7 1144 615 313 59 62 chrX 73344060 73344397 -93305899 + ORR1E LTR MaLR 7 342 -17 7 1144 579 297 125 17 chrX 73344444 73344473 -93305823 + Cheshire DNA MER1_type 1155 1180 -1240 7 1144 1125 90 0 0 chrX 73344473 73344618 -93305678 - B1_Mus1 SINE Alu -1 147 3 7 1144 579 297 125 17 chrX 73344618 73344876 -93305420 + Cheshire DNA MER1_type 1181 1472 -948 7 1144 655 275 57 57 chrX 73345131 73345343 -93304953 - B3 SINE B2 -3 213 2 7 1144 555 285 60 55 chrX 73346668 73346850 -93303446 + ID_B1 SINE B4 26 208 -16 7 1144 642 259 107 25 chrX 73347375 73347739 -93302557 - L1MA8 LINE L1 -53 6238 5845 7 1144 27 0 0 0 chrX 73348386 73348413 -93301883 + AT_rich Low_complexity Low_complexity 1 27 0 7 1144 1133 75 0 26 chrX 73348639 73348790 -93301506 - B1_Mus2 SINE Alu 0 147 1 7 1144 285 295 95 10 chrX 73348816 73348946 -93301350 + B4 SINE B4 54 191 -101 7 1144 553 191 55 31 chrX 73348860 73348987 -93301309 + PB1D9 SINE Alu 11 125 -22 7 1144 247 186 0 0 chrX 73349042 73349085 -93301211 + B1_Mur1 SINE Alu 100 142 -7 7 1144 508 260 96 126 chrX 73349099 73349266 -93301030 - B3A SINE B2 -17 178 17 7 1144 485 286 30 28 chrX 73349556 73349732 -93300564 - MLT1A0 LTR MaLR 0 408 218 7 1144 189 107 0 0 chrX 73349740 73349768 -93300528 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1144 409 329 6 57 chrX 73349868 73349912 -93300384 + MIRb SINE MIR 72 114 -154 7 1144 2398 93 9 0 chrX 73349912 73350236 -93300060 - ORR1A2 LTR MaLR 0 327 1 7 1144 409 329 6 57 chrX 73350236 73350368 -93299928 + MIRb SINE MIR 115 239 -29 7 1144 366 188 0 14 chrX 73350511 73350581 -93299715 - MTD-int LTR MaLR -943 315 247 7 1144 1192 198 4 26 chrX 73350581 73350770 -93299526 - URR1B DNA MER1_type 0 225 41 7 1144 3178 73 2 2 chrX 73350770 73351170 -93299126 + MTB LTR MaLR 1 400 0 7 1144 1192 198 4 26 chrX 73351170 73351208 -93299088 - URR1B DNA MER1_type -185 40 3 7 1144 1022 223 23 42 chrX 73351208 73351463 -93298833 - MTD-int LTR MaLR -1008 250 1 7 1144 1558 198 112 8 chrX 73351463 73351831 -93298465 - MTD LTR MaLR -14 405 12 7 1144 334 279 40 7 chrX 73351846 73351994 -93298302 - L1MC LINE L1 -3546 2600 2448 7 1144 660 284 36 26 chrX 73352149 73352344 -93297952 - B3A SINE B2 0 198 2 7 1144 227 226 49 82 chrX 73352355 73352538 -93297758 - L1MB1 LINE L1 -5 6184 6008 7 1144 297 273 32 64 chrX 73352560 73352654 -93297642 - Lx9 LINE L1 -1128 6516 6426 7 1144 2669 194 63 26 chrX 73352697 73353283 -93297013 + RLTR18 LTR ERVK 9 616 0 7 1144 945 202 6 11 chrX 73353367 73353547 -93296749 - RMER19B LTR ERVK -27 875 697 7 1144 234 0 0 0 chrX 73353601 73353627 -93296669 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 1144 21 0 0 0 chrX 73353731 73353752 -93296544 + AT_rich Low_complexity Low_complexity 1 21 0 7 1144 394 82 82 0 chrX 73353853 73353926 -93296370 - Lx2 LINE L1 0 6997 6919 7 1144 550 172 17 43 chrX 73354107 73354223 -93296073 + PB1D10 SINE Alu 12 112 -5 8 1144 3332 75 0 0 chrX 73354867 73355304 -93294992 + L1Md_T LINE L1 6146 6582 0 8 1144 851 119 35 50 chrX 73355342 73355469 -93294827 + B1_Mus1 SINE Alu 8 135 -13 8 1144 185 0 40 0 chrX 73355469 73355494 -93294802 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 8 1144 851 119 35 50 chrX 73355494 73355507 -93294789 + B1_Mus1 SINE Alu 136 146 -2 8 1144 252 0 0 0 chrX 73356469 73356497 -93293799 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 1144 324 0 0 0 chrX 73356497 73356532 -93293764 + (GA)n Simple_repeat Simple_repeat 1 36 0 8 1144 25 0 0 0 chrX 73356551 73356576 -93293720 + AT_rich Low_complexity Low_complexity 1 25 0 8 1144 339 25 0 0 chrX 73357340 73357380 -93292916 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 1144 325 245 42 68 chrX 73358028 73358146 -93292150 + PB1D10 SINE Alu 6 120 0 8 1144 216 240 17 8 chrX 73358148 73358266 -93292030 + GA-rich Low_complexity Low_complexity 1 118 0 8 1144 2337 146 157 9 chrX 73358351 73358815 -93291481 + Lx4B LINE L1 6461 6993 -65 8 1144 537 260 15 8 chrX 73359282 73359414 -93290882 - ID_B1 SINE B4 -1 223 91 8 1144 1321 167 106 4 chrX 73359834 73360080 -93290216 + MTC LTR MaLR 1 271 -150 8 1144 834 159 0 0 chrX 73360295 73360433 -93289863 + MTC LTR MaLR 279 416 -5 8 1144 186 125 62 0 chrX 73360433 73360465 -93289831 + MIRc SINE MIR 127 160 -108 8 1144 198 0 0 0 chrX 73361357 73361379 -93288917 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1144 684 249 82 10 chrX 73361823 73362018 -93288278 - ID_B1 SINE B4 -15 209 1 8 1144 293 200 54 18 chrX 73362645 73362757 -93287539 + (TTATA)n Simple_repeat Simple_repeat 5 120 0 8 1144 295 107 32 106 chrX 73362768 73362957 -93287339 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 8 1144 229 96 80 27 chrX 73363018 73363093 -93287203 + (TATAA)n Simple_repeat Simple_repeat 4 82 0 8 1144 8463 11 2 0 chrX 73363896 73365237 -93285059 - L1Md_T LINE L1 -3 6579 5236 8 1144 321 285 56 43 chrX 73365245 73365362 -93284934 + MLT1A1 LTR MaLR 224 348 -60 8 1144 264 178 0 0 chrX 73365362 73365407 -93284889 - ID_B1 SINE B4 -3 221 177 8 1144 236 231 0 58 chrX 73365405 73365474 -93284822 + MLT1A1 LTR MaLR 308 372 -2 8 1144 625 319 32 36 chrX 73366157 73366407 -93283889 + L3 LINE CR1 4181 4429 -60 8 1144 212 319 16 89 chrX 73366598 73366722 -93283574 + MIR SINE MIR 72 186 -76 8 1144 603 40 0 0 chrX 73367343 73367417 -93282879 + (TATG)n Simple_repeat Simple_repeat 3 76 0 8 1144 22 0 0 0 chrX 73367420 73367442 -93282854 + AT_rich Low_complexity Low_complexity 1 22 0 8 1144 384 157 62 171 chrX 73370489 73370515 -93279781 + MT2B LTR ERVL 135 205 -396 8 1144 1092 68 0 45 chrX 73370515 73370569 -93279727 + B1_Mus1 SINE Alu 1 49 -99 8 1144 2466 98 3 70 chrX 73370569 73370954 -93279342 + RLTR10D LTR ERVK 1 359 0 8 1144 384 157 62 171 chrX 73370954 73371019 -93279277 + MT2B LTR ERVL 206 264 -337 8 1144 1092 68 0 45 chrX 73371019 73371053 -93279243 + B1_Mus1 SINE Alu 50 147 -1 8 1144 1888 176 74 31 chrX 73372291 73372737 -93277559 - Lx9 LINE L1 -34 7610 7146 8 1144 1478 186 22 22 chrX 73372743 73373057 -93277239 - Lx9 LINE L1 -667 6977 6664 8 1144 248 342 105 0 chrX 73373613 73373626 -93276670 - B1_Mur3 SINE Alu -21 128 3 8 1144 401 267 89 0 chrX 73373626 73373727 -93276569 - ID_B1 SINE B4 -31 193 84 8 1144 348 164 0 0 chrX 73373738 73373805 -93276491 + (TA)n Simple_repeat Simple_repeat 1 67 0 8 1144 335 321 45 15 chrX 73373994 73374127 -93276169 - MIR SINE MIR -56 206 70 8 1144 3693 98 8 0 chrX 73374195 73374706 -93275590 - SSU-rRNA_Hsa rRNA rRNA -488 1381 867 8 1144 210 71 0 0 chrX 73374868 73374896 -93275400 + (T)n Simple_repeat Simple_repeat 1 28 0 8 1144 216 343 15 0 chrX 73375699 73375766 -93274530 + ID_B1 SINE B4 95 162 -62 8 1144 6850 88 20 2 chrX 73375844 73377256 -93273040 - L1_Mus1 LINE L1 0 6567 5130 8 1144 13074 127 14 29 chrX 73377254 73380359 -93269937 - L1_Mus1 LINE L1 -2435 3448 387 8 1144 1199 124 0 11 chrX 73380502 73380690 -93269606 - B2_Mm2 SINE B2 -8 187 2 8 1144 1298 321 55 31 chrX 73380721 73381363 -93268933 - Lx8 LINE L1 -10 7463 6807 8 1144 2217 196 10 14 chrX 73381367 73381781 -93268515 - MTC LTR MaLR -9 412 1 8 1144 1571 280 49 34 chrX 73381781 73382316 -93267980 - Lx8 LINE L1 -661 6812 6270 8 1144 567 344 13 0 chrX 73382317 73382474 -93267822 - ID_B1 SINE B4 -65 159 1 8 1144 384 22 0 0 chrX 73384426 73384471 -93265825 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 1144 535 327 67 19 chrX 73384589 73384798 -93265498 - MIR SINE MIR -9 253 35 8 1144 230 333 0 45 chrX 73384966 73385032 -93265264 - ID4 SINE ID -19 64 2 8 1144 746 319 53 44 chrX 73385409 73385730 -93264566 - MLT1A0 LTR MaLR -41 324 1 8 1144 858 254 0 24 chrX 73385844 73386054 -93264242 - B3 SINE B2 -8 208 4 8 1144 225 159 0 0 chrX 73387370 73387414 -93262882 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 8 1144 196 120 0 39 chrX 73387420 73387472 -93262824 + (CAGAGA)n Simple_repeat Simple_repeat 5 54 0 8 1144 872 218 37 25 chrX 73387565 73387810 -93262486 - RLTR13D1 LTR ERVK -33 773 526 8 1144 12646 99 30 17 chrX 73387810 73389993 -93260303 + MusHAL1 LINE L1 58 2268 -444 8 1144 6045 127 41 9 chrX 73389991 73391136 -93259160 + Lx LINE L1 5476 6654 0 8 1144 627 335 20 4 chrX 73391181 73391427 -93258869 + Lx9 LINE L1 6328 6577 -1067 8 1144 215 302 19 0 chrX 73391449 73391502 -93258794 + ID4 SINE ID 2 55 -28 8 1144 204 212 0 0 chrX 73391543 73391609 -93258687 + (CA)n Simple_repeat Simple_repeat 1 66 0 8 1144 385 138 0 0 chrX 73391908 73391973 -93258323 + U3 snRNA snRNA 1 65 -152 8 1144 26 50 0 0 chrX 73391997 73392037 -93258259 + AT_rich Low_complexity Low_complexity 1 40 0 8 1144 310 285 80 16 chrX 73392198 73392323 -93257973 + B1F SINE Alu 5 137 -12 8 1144 38022 29 1 6 chrX 73392347 73398575 -93251721 - L1Md_T LINE L1 0 6582 389 8 1144 3514 79 12 2 chrX 73399807 73400288 -93250008 + RLTR44D LTR ERVK 1 486 0 8 17 959 102 23 62 chrX 73400288 73400465 -93249831 + RLTR44-int LTR ERVK 1 170 -2642 8 1145 748 84 10 7 chrX 73400486 73400630 -93249666 + RLTR44-int LTR ERVK 817 935 -1877 8 1145 15451 51 5 16 chrX 73400630 73402652 -93247644 + RLTR44-int LTR ERVK 814 2812 0 8 1145 2566 65 189 2 chrX 73402652 73403055 -93247241 + RLTR44D LTR ERVK 1 478 -8 8 1145 211 211 0 0 chrX 73403611 73403649 -93246647 + CT-rich Low_complexity Low_complexity 1 38 0 8 1145 212 240 40 0 chrX 73403649 73403699 -93246597 - B1F SINE Alu -1 148 97 8 1145 725 308 6 0 chrX 73403986 73404158 -93246138 - ID_B1 SINE B4 -46 178 6 8 1145 223 222 0 0 chrX 73405042 73405078 -93245218 + ID_B1 SINE B4 86 121 -103 8 1145 493 286 115 5 chrX 73405321 73405521 -93244775 + ID_B1 SINE B4 2 223 -1 8 1145 183 42 0 0 chrX 73405531 73405555 -93244741 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 8 1145 349 242 15 0 chrX 73405562 73405628 -93244668 + ID SINE ID 1 67 -157 8 1145 185 65 0 31 chrX 73405632 73405664 -93244632 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 1145 300 83 0 0 chrX 73405858 73405906 -93244390 + (TG)n Simple_repeat Simple_repeat 1 48 0 8 1145 423 0 0 0 chrX 73405906 73405952 -93244344 + (GA)n Simple_repeat Simple_repeat 1 47 0 8 1145 296 341 184 42 chrX 73405972 73406189 -93244107 - B4A SINE B4 -21 271 24 8 1145 23 68 0 0 chrX 73406625 73406669 -93243627 + AT_rich Low_complexity Low_complexity 1 44 0 8 1145 428 152 282 43 chrX 73406691 73406808 -93243488 + ORR1D1 LTR MaLR 230 374 0 8 1145 474 285 7 37 chrX 73406822 73406957 -93243339 + B1F SINE Alu 18 148 -1 8 1145 270 0 0 0 chrX 73408165 73408195 -93242101 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 1145 325 318 45 0 chrX 73408239 73408327 -93241969 - B3A SINE B2 -82 116 25 8 1145 491 316 7 0 chrX 73408433 73408585 -93241711 - Lx8 LINE L1 -129 7344 7192 8 1145 355 225 0 0 chrX 73408821 73408901 -93241395 + Lx9 LINE L1 4243 4322 -1525 8 1145 768 222 22 56 chrX 73408872 73409132 -93241164 + Lx9 LINE L1 5707 5960 -1684 8 1145 189 0 0 0 chrX 73409359 73409380 -93240916 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 1145 207 0 0 0 chrX 73409380 73409402 -93240894 + (TA)n Simple_repeat Simple_repeat 1 23 0 8 1145 3396 261 35 34 chrX 73409403 73410683 -93239613 + Lx9 LINE L1 6341 7621 -23 8 1145 261 242 16 0 chrX 73411133 73411195 -93239101 + B4 SINE B4 13 75 -217 8 1145 322 316 140 0 chrX 73411208 73411344 -93238952 + RSINE1 SINE B4 3 157 -8 8 1145 518 286 25 70 chrX 73411432 73411517 -93238779 + B4 SINE B4 132 217 -75 8 1145 1012 68 0 26 chrX 73411517 73411669 -93238627 + (CAAAA)n Simple_repeat Simple_repeat 2 149 0 8 1145 518 286 25 70 chrX 73411669 73411741 -93238555 + B4 SINE B4 218 282 -10 8 1145 2817 61 0 3 chrX 73411921 73412281 -93238015 + L1Md_F2 LINE L1 6222 6580 -2 8 1145 2177 152 10 30 chrX 73412294 73412588 -93237708 - L1_Mm LINE L1 -135 5748 5462 8 1145 1370 97 64 18 chrX 73412588 73412808 -93237488 - L1_Mus3 LINE L1 -2 6636 6407 8 1145 2177 152 10 30 chrX 73412808 73412914 -93237382 - L1_Mm LINE L1 -422 5461 5356 8 1145 6985 78 12 3 chrX 73412925 73414221 -93236075 - L1_Mus1 LINE L1 0 6567 5259 8 1145 4945 127 10 10 chrX 73414222 73415048 -93235248 + L1_Mus1 LINE L1 4430 5255 -628 8 1145 386 155 0 27 chrX 73415040 73415128 -93235168 - L1_Mur2 LINE L1 -506 5374 5288 8 1145 2678 182 8 14 chrX 73415128 73415645 -93234651 - Lx LINE L1 -7 6647 6134 8 1145 388 229 0 0 chrX 73415682 73415752 -93234544 - ID SINE ID -146 78 9 8 1145 228 35 0 0 chrX 73415804 73415833 -93234463 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 8 1145 1381 179 27 0 chrX 73415833 73416096 -93234200 - Lx2A1 LINE L1 -10 6998 6729 8 1145 259 330 48 0 chrX 73416252 73416355 -93233941 - PB1D7 SINE Alu -10 110 3 8 1145 214 330 41 10 chrX 73417349 73417447 -93232849 - B3 SINE B2 -28 188 88 8 1145 408 20 0 0 chrX 73417821 73417870 -93232426 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 8 1145 1002 109 0 0 chrX 73417870 73418008 -93232288 - B1_Mus2 SINE Alu -9 138 1 8 1145 23 0 0 0 chrX 73418031 73418054 -93232242 + AT_rich Low_complexity Low_complexity 1 23 0 8 1145 315 0 0 0 chrX 73418186 73418221 -93232075 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8 1145 379 271 0 27 chrX 73418225 73418335 -93231961 - PB1D9 SINE Alu -12 108 2 8 1145 251 85 21 0 chrX 73418563 73418610 -93231686 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 1145 443 264 8 32 chrX 73418724 73418849 -93231447 + MIRb SINE MIR 70 191 -77 8 1145 255 154 0 103 chrX 73418883 73418941 -93231355 + PB1 SINE Alu 64 115 -12 9 1145 233 310 0 17 chrX 73418971 73419030 -93231266 + tRNA-Ala-GCY_ tRNA tRNA 6 63 -12 9 1145 337 311 22 11 chrX 73419623 73419714 -93230582 - PB1D10 SINE Alu -21 96 5 9 1145 234 339 34 8 chrX 73419810 73419929 -93230367 + PB1 SINE Alu 5 126 -1 9 1145 4399 151 57 25 chrX 73419929 73420803 -93229493 - RLTR13D6 LTR ERVK 0 902 1 9 1145 1121 215 93 68 chrX 73421325 73421408 -93228888 - ORR1D1 LTR MaLR 0 374 304 9 1145 1376 90 16 0 chrX 73421408 73421597 -93228699 + B2_Mm2 SINE B2 2 193 -2 9 1145 1121 215 93 68 chrX 73421597 73421878 -93228418 - ORR1D1 LTR MaLR -71 303 1 9 1145 218 208 104 0 chrX 73422014 73422062 -93228234 + ID4 SINE ID 4 56 -27 9 1145 2920 163 42 26 chrX 73422138 73422666 -93227630 - RMER2 LTR ERV1 -31 536 1 9 1145 787 201 389 55 chrX 73423070 73423492 -93226804 - RMER2 LTR ERV1 -4 563 1 9 1145 210 307 0 51 chrX 73424187 73424266 -93226030 - ID4 SINE ID -7 76 2 9 1145 1097 268 50 4 chrX 73425021 73425298 -93224998 + B4A SINE B4 2 291 -1 9 1145 29 0 0 0 chrX 73425458 73425487 -93224809 + AT_rich Low_complexity Low_complexity 1 29 0 9 1145 288 0 0 0 chrX 73425500 73425532 -93224764 + (TAGA)n Simple_repeat Simple_repeat 2 33 0 9 1145 422 273 127 0 chrX 73425811 73425921 -93224375 - B1F SINE Alu -16 133 10 9 1145 332 280 120 129 chrX 73425921 73426020 -93224276 - ID_B1 SINE B4 -16 208 2 9 1145 22 0 0 0 chrX 73426452 73426474 -93223822 + AT_rich Low_complexity Low_complexity 1 22 0 9 1145 219 326 11 11 chrX 73427244 73427334 -93222962 - MIRc SINE MIR -17 251 162 9 1145 773 308 55 55 chrX 73427508 73427797 -93222499 - B4A SINE B4 0 292 4 9 1145 483 314 0 28 chrX 73428249 73428390 -93221906 + B1F SINE Alu 2 138 -11 9 1145 558 270 131 45 chrX 73428443 73428664 -93221632 + Lx5 LINE L1 6480 6719 -331 9 1145 5632 56 50 7 chrX 73428929 73429653 -93220643 - L1_Mus1 LINE L1 -6 6561 5807 9 1145 2789 115 0 8 chrX 73429897 73430448 -93219848 - L1_Mus3 LINE L1 -684 5954 5407 9 1145 1714 138 6 69 chrX 73430448 73430767 -93219529 + L1_Mus3 LINE L1 6338 6636 -2 9 1145 333 314 118 0 chrX 73430942 73431044 -93219252 - PB1 SINE Alu 0 127 14 9 1145 2543 130 16 4 chrX 73431243 73431805 -93218491 + Lx5 LINE L1 5415 5988 -1062 9 1145 327 356 30 0 chrX 73432503 73432604 -93217692 + PB1D10 SINE Alu 1 104 -13 9 1145 506 250 191 0 chrX 73432852 73432988 -93217308 - MER5A1 DNA MER1_type -1 165 4 9 1145 612 250 68 62 chrX 73433145 73433337 -93216959 + MTEa LTR MaLR 22 214 -165 9 1145 1742 213 53 108 chrX 73433976 73434487 -93215809 - RMER19B LTR ERVK -419 483 1 9 1145 1305 164 36 0 chrX 73434487 73434804 -93215492 + L1_Mur1 LINE L1 1068 1395 -4491 9 1145 7215 152 25 193 chrX 73434805 73435829 -93214467 + L1_Mur1 LINE L1 2402 3416 -2461 9 1145 1711 113 40 44 chrX 73435829 73436126 -93214170 + Lx LINE L1 6358 6653 -1 9 1145 7215 152 25 193 chrX 73436126 73436649 -93213647 + L1_Mur1 LINE L1 3417 3530 -2347 9 1145 5918 61 1 9 chrX 73436649 73437415 -93212881 + L1_Mus1 LINE L1 5807 6566 -1 9 1145 7215 152 25 193 chrX 73437415 73438296 -93212000 + L1_Mur1 LINE L1 3531 4423 -1454 9 1145 225 258 95 21 chrX 73438335 73438430 -93211866 + MIRc SINE MIR 26 127 -141 9 1145 198 71 0 0 chrX 73438841 73438869 -93211427 + (TGG)n Simple_repeat Simple_repeat 1 28 0 9 1145 219 36 0 0 chrX 73439740 73439768 -93210528 + (TGG)n Simple_repeat Simple_repeat 3 30 0 9 1145 213 320 13 13 chrX 73439774 73439850 -93210446 + B4A SINE B4 10 85 -207 9 1145 2516 154 60 54 chrX 73440046 73440548 -93209748 + RMER15 LTR ERVL 14 518 -57 9 1145 25 0 0 0 chrX 73441598 73441623 -93208673 + AT_rich Low_complexity Low_complexity 1 25 0 9 1145 7557 59 0 1 chrX 73441623 73442763 -93207533 - L1Md_F2 LINE L1 -3 6579 5442 9 1145 313 315 205 26 chrX 73444360 73444813 -93205483 - HAL1-2a_MD LINE L1 -1670 1354 821 9 1145 24 67 0 0 chrX 73445299 73445344 -93204952 + AT_rich Low_complexity Low_complexity 1 45 0 9 1145 323 252 56 46 chrX 73446034 73446142 -93204154 + B4A SINE B4 2 110 -182 9 1145 264 190 66 49 chrX 73446736 73446797 -93203499 - BC1_Mm scRNA scRNA -69 83 22 9 1145 216 0 0 0 chrX 73447194 73447218 -93203078 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 1145 266 301 17 26 chrX 73447228 73447344 -93202952 - PB1D10 SINE Alu -1 116 2 9 1145 440 274 81 0 chrX 73447382 73447506 -93202790 - ID_B1 SINE B4 -10 214 81 9 1145 233 266 31 0 chrX 73447587 73447651 -93202645 - ID4_ SINE ID -9 74 9 9 1145 228 342 0 0 chrX 73447717 73447790 -93202506 - L2a LINE L2 -7 3419 3347 9 1145 217 299 48 83 chrX 73447791 73447875 -93202421 + ID SINE ID 3 83 -141 9 1145 611 124 19 0 chrX 73447884 73447989 -93202307 + L1_Mur2 LINE L1 3778 3884 -1993 9 1145 348 236 124 47 chrX 73448061 73448190 -93202106 + B1F2 SINE Alu 10 148 -1 9 1145 338 319 0 45 chrX 73448220 73448378 -93201918 + B3A SINE B2 70 212 -4 9 1145 6904 72 14 10 chrX 73448496 73450019 -93200277 - L1Md_F2 LINE L1 -12 6570 5050 9 1145 19854 96 16 3 chrX 73450002 73453724 -93196572 - L1Md_F2 LINE L1 -1730 4153 382 9 1145 291 371 76 0 chrX 73453747 73453879 -93196417 - MER5A DNA MER1_type -40 149 8 9 1145 306 0 0 0 chrX 73453922 73453956 -93196340 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 9 1145 568 271 20 14 chrX 73455149 73455276 -93195020 + ID_B1 SINE B4 1 128 -96 9 1145 256 289 35 111 chrX 73455276 73455420 -93194876 + RSINE1 SINE B4 2 134 -31 9 1145 274 278 27 14 chrX 73455470 73455543 -93194753 + RSINE1 SINE B4 2 75 -90 9 1145 1002 87 19 39 chrX 73455540 73455696 -93194600 + B2_Mm2 SINE B2 36 188 -7 9 1145 357 268 0 12 chrX 73456070 73456153 -93194143 - MER20 DNA MER1_type -17 202 121 9 1145 29 47 0 0 chrX 73456271 73456314 -93193982 + AT_rich Low_complexity Low_complexity 1 43 0 9 1145 471 258 251 24 chrX 73456657 73456824 -93193472 + ID_B1 SINE B4 2 206 -18 9 1145 4110 55 0 12 chrX 73456826 73457341 -93192955 + L1_Mus1 LINE L1 6057 6565 -2 9 1145 222 150 0 0 chrX 73457351 73457391 -93192905 + (GAAA)n Simple_repeat Simple_repeat 2 41 0 9 1145 301 318 0 0 chrX 73457599 73457665 -93192631 + PB1D10 SINE Alu 17 82 -35 9 1145 254 220 82 33 chrX 73457616 73457677 -93192619 + 4.5SRNA scRNA scRNA 27 90 -4 9 1145 328 311 20 106 chrX 73457935 73457978 -93192318 - MTE2b LTR MaLR -2 377 340 9 1145 1067 88 7 0 chrX 73457978 73458115 -93192181 + B1_Mus2 SINE Alu 1 138 -9 9 1145 197 0 71 0 chrX 73458115 73458143 -93192153 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 9 1145 660 301 168 38 chrX 73458143 73458441 -93191855 - MTE2b LTR MaLR -40 339 1 9 1145 25 0 0 0 chrX 73458682 73458707 -93191589 + AT_rich Low_complexity Low_complexity 1 25 0 9 1145 649 36 80 120 chrX 73458740 73458865 -93191431 + BC1_Mm scRNA scRNA 15 134 -18 9 1145 378 0 0 0 chrX 73458901 73458943 -93191353 + (TG)n Simple_repeat Simple_repeat 2 43 0 9 1145 213 39 0 0 chrX 73459065 73459091 -93191205 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 9 1145 1630 199 32 3 chrX 73459732 73460070 -93190226 + Lx LINE L1 6300 6647 -7 9 1145 2183 181 13 20 chrX 73460070 73460235 -93190061 + L1_Mm LINE L1 5294 5456 -427 9 1145 1209 142 63 18 chrX 73460235 73460457 -93189839 + L1_Mus3 LINE L1 6403 6634 -4 9 1145 2183 181 13 20 chrX 73460457 73460749 -93189547 + L1_Mm LINE L1 5457 5748 -135 9 1145 32280 76 2 9 chrX 73460765 73464395 -93185901 - L1Md_F2 LINE L1 -2 6580 2965 9 1145 8283 27 0 0 chrX 73464395 73465352 -93184944 + L1Md_A LINE L1 5626 6582 0 9 1145 32280 116 6 19 chrX 73465352 73467957 -93182339 - L1Md_F2 LINE L1 -2919 2964 410 9 1145 1767 159 14 0 chrX 73467947 73468298 -93181998 - L1_Mur2 LINE L1 -580 5297 4942 9 1145 208 279 0 29 chrX 73468644 73468714 -93181582 + (TATG)n Simple_repeat Simple_repeat 3 70 0 9 1145 431 329 18 84 chrX 73468744 73468910 -93181386 - B4 SINE B4 -6 286 132 9 1145 341 316 125 0 chrX 73468998 73469134 -93181162 - RSINE1 SINE B4 -10 155 3 9 1145 249 258 16 0 chrX 73469147 73469209 -93181087 - B4 SINE B4 -217 75 13 9 1145 3483 270 27 28 chrX 73469658 73470939 -93179357 - Lx9 LINE L1 -23 7621 6342 9 1145 546 68 34 0 chrX 73470940 73471028 -93179268 + (TA)n Simple_repeat Simple_repeat 1 91 0 9 1145 699 247 19 35 chrX 73471252 73471512 -93178784 - Lx9 LINE L1 -1684 5960 5707 9 1145 355 225 0 0 chrX 73471483 73471563 -93178733 - Lx9 LINE L1 -1525 4322 4243 9 1145 533 296 7 0 chrX 73471799 73471951 -93178345 + Lx8 LINE L1 7192 7344 -129 9 1145 327 318 45 0 chrX 73472057 73472145 -93178151 + B3A SINE B2 25 116 -82 9 1145 312 27 0 0 chrX 73472190 73472227 -93178069 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 1145 962 94 0 42 chrX 73473280 73473424 -93176872 + B1_Mm SINE Alu 3 140 -7 9 1145 432 0 0 0 chrX 73473427 73473475 -93176821 + (TAA)n Simple_repeat Simple_repeat 3 50 0 9 1145 492 285 7 37 chrX 73473633 73473768 -93176528 - B1F SINE Alu -1 148 18 9 1145 410 161 282 43 chrX 73473782 73473899 -93176397 - ORR1D1 LTR MaLR 0 374 230 9 1145 22 0 0 0 chrX 73473921 73473943 -93176353 + AT_rich Low_complexity Low_complexity 1 22 0 9 1145 766 259 21 5 chrX 73474113 73474284 -93176012 + B3A SINE B2 9 182 -16 9 1145 393 39 0 0 chrX 73474284 73474335 -93175961 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 1145 766 259 21 5 chrX 73474335 73474349 -93175947 + B3A SINE B2 183 196 -2 9 1145 287 235 272 76 chrX 73474601 73474759 -93175537 + B4 SINE B4 43 221 -71 9 1145 2900 80 25 2 chrX 73474759 73475158 -93175138 - L1_Mus1 LINE L1 0 6567 6160 9 1145 267 271 209 141 chrX 73475158 73475205 -93175091 + B4A SINE B4 222 262 -30 9 1145 402 21 0 0 chrX 73475237 73475284 -93175012 + (TC)n Simple_repeat Simple_repeat 2 48 0 9 1145 183 42 0 0 chrX 73475301 73475325 -93174971 + (CA)n Simple_repeat Simple_repeat 1 24 0 9 1145 191 36 0 35 chrX 73475485 73475514 -93174782 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 9 1145 207 0 0 0 chrX 73475519 73475542 -93174754 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1 1145 275 241 0 0 chrX 73475554 73475612 -93174684 - tRNA-Ala-GCA tRNA tRNA -15 60 3 1 1145 488 278 120 10 chrX 73475644 73475844 -93174452 - ID_B1 SINE B4 -1 223 2 1 1145 223 286 0 0 chrX 73476371 73476427 -93173869 - ID4_ SINE ID -26 57 2 1 1145 650 325 6 0 chrX 73476991 73477157 -93173139 + ID_B1 SINE B4 12 178 -46 1 1145 33800 35 4 0 chrX 73481817 73487204 -93163092 + L1Md_T LINE L1 83 5589 -297 1 1145 8987 5 0 5 chrX 73487204 73488205 -93162091 + L1Md_T LINE L1 5590 6585 0 1 1145 1575 44 10 0 chrX 73488349 73488555 -93161741 - L1Md_F2 LINE L1 -1 6581 6374 1 1145 671 374 19 0 chrX 73489051 73489369 -93160927 - MTD LTR MaLR -93 326 3 1 1145 237 373 28 50 chrX 73489389 73489530 -93160766 + MTE-int LTR MaLR 826 963 -617 1 1145 658 335 31 20 chrX 73490146 73490439 -93159857 - MTD LTR MaLR -99 320 25 1 1145 842 340 12 0 chrX 73491389 73491710 -93158586 - MTD LTR MaLR -92 327 3 1 1145 250 338 51 38 chrX 73491710 73491867 -93158429 + MTE-int LTR MaLR 805 963 -617 1 1145 2392 62 3 7 chrX 73492034 73492343 -93157953 - MTB LTR MaLR 0 400 93 1 1145 935 302 43 12 chrX 73492959 73493284 -93157012 - MTD LTR MaLR -82 337 3 1 1145 263 324 28 28 chrX 73493318 73493426 -93156870 + MTE-int LTR MaLR 840 947 -633 1 1145 572 349 48 19 chrX 73494052 73494321 -93155975 + MTE-int LTR MaLR 810 1086 -494 1 1145 250 353 60 8 chrX 73494351 73494485 -93155811 + MTE-int LTR MaLR 1416 1556 -24 1 1145 267 296 88 65 chrX 73494546 73494716 -93155580 + MER20 DNA MER1_type 44 217 -2 1 1145 4153 129 8 19 chrX 73495658 73496979 -93153317 + L1Md_A LINE L1 217 1734 -4149 1 1145 400 79 0 0 chrX 73496982 73497045 -93153251 - L1Md_A LINE L1 -2948 2935 2873 1 1145 1238 196 8 4 chrX 73497044 73497305 -93152991 - L1Md_A LINE L1 -5974 750 489 1 1145 6200 77 20 50 chrX 73497305 73498232 -93152064 + L1Md_F2 LINE L1 5672 6571 -11 1 1145 388 213 55 5 chrX 73498232 73498381 -93151915 - L1_Mur1 LINE L1 -6218 764 710 1 1145 390 247 17 105 chrX 73498382 73498563 -93151733 - L1_Mur1 LINE L1 -6669 313 149 1 1145 6791 86 18 0 chrX 73498567 73500000 -93150296 - L1Md_F2 LINE L1 0 6582 5129 1 1145 27903 91 27 11 chrX 73500001 73504695 -93145601 - L1Md_F LINE L1 -756 5127 357 1 1145 4936 138 29 8 chrX 73504695 73505517 -93144779 - ETnERV2-int LTR ERVK -3513 3893 3055 2 1145 670 252 0 37 chrX 73505517 73505678 -93144618 - ETnERV2-int LTR ERVK -4798 2608 2454 2 1145 605 200 26 0 chrX 73505696 73505811 -93144485 - RLTR19-int LTR ERVK -5082 1055 938 3 1145 278 186 67 17 chrX 73505816 73505876 -93144420 - RLTR19-int LTR ERVK -4587 819 757 3 1145 263 106 0 0 chrX 73505885 73505932 -93144364 - RLTR19-int LTR ERVK -5218 188 142 3 1145 389 205 0 13 chrX 73506364 73506443 -93143853 - ETnERV2-int LTR ERVK -5081 2163 2086 2 1145 810 196 25 88 chrX 73506419 73506762 -93143534 - MMETn-int LTR ERVK -2930 384 2 4 1145 2459 158 10 26 chrX 73506764 73507180 -93143116 - RLTR9E LTR ERVK 0 409 1 4 1145 271 294 27 47 chrX 73507773 73507923 -93142373 + Lx4B LINE L1 6910 7056 -2 5 1145 476 16 16 0 chrX 73507926 73507987 -93142309 + (GA)n Simple_repeat Simple_repeat 2 63 0 6 1145 874 0 19 0 chrX 73507987 73508093 -93142203 + (GAA)n Simple_repeat Simple_repeat 3 110 0 7 1145 4618 122 6 0 chrX 73508797 73509443 -93140853 + L1_Mus4 LINE L1 5984 6633 -3 8 1145 661 126 0 25 chrX 73509446 73509568 -93140728 + A-rich Low_complexity Low_complexity 2 120 0 9 1145 670 189 24 0 chrX 73510082 73510209 -93140087 - ORR1C2 LTR MaLR 0 384 255 1 1145 259 154 15 15 chrX 73510256 73510322 -93139974 + GA-rich Low_complexity Low_complexity 2 67 0 1 1145 399 319 15 73 chrX 73510322 73510528 -93139768 - ORR1C2 LTR MaLR -190 194 1 1 1145 2672 282 25 26 chrX 73510531 73511336 -93138960 - ORR1C2-int LTR MaLR -3 1367 564 1 1145 207 152 0 0 chrX 73511733 73511779 -93138517 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1145 244 303 29 29 chrX 73511859 73511927 -93138369 + ID_B1 SINE B4 90 157 -67 1 1145 250 296 174 0 chrX 73513152 73513250 -93137046 - Lx7 LINE L1 -1657 6039 5925 1 1145 587 211 70 0 chrX 73513265 73513379 -93136917 - B1_Mus2 SINE Alu -25 122 1 1 1145 1918 195 11 14 chrX 73513379 73513806 -93136490 - Lx7 LINE L1 -1763 5933 5504 1 1145 221 192 0 40 chrX 73514987 73515063 -93135233 + T-rich Low_complexity Low_complexity 1 73 0 1 1145 4772 114 4 28 chrX 73515066 73515788 -93134508 - L1_Mus2 LINE L1 -6 6560 5856 1 1145 285 29 84 28 chrX 73515788 73515859 -93134437 + (TTTG)n Simple_repeat Simple_repeat 2 76 0 1 1145 1131 109 0 0 chrX 73515872 73516019 -93134277 - B1_Mm SINE Alu 0 147 1 1 1145 7187 143 1 4 chrX 73516020 73517132 -93133164 - L1Md_F LINE L1 -9 5874 4766 2 1145 3180 61 200 9 chrX 73517132 73517562 -93132734 + RLTR1B LTR ERV1 1 512 0 2 1145 67579 21 1 1 chrX 73517562 73525118 -93125178 + MMERGLN-int LTR ERV1 1 7556 0 2 1145 3193 59 200 9 chrX 73525118 73525548 -93124748 + RLTR1B LTR ERV1 1 512 0 2 1145 21459 136 10 7 chrX 73525548 73527139 -93123157 - L1Md_F LINE L1 -1114 4769 3172 2 1145 258 56 0 0 chrX 73527139 73527175 -93123121 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2 1145 21459 164 25 12 chrX 73527175 73529925 -93120371 - L1Md_F LINE L1 -2712 3171 387 2 143 8770 103 20 12 chrX 73530170 73531786 -93118510 - L1VL4 LINE L1 -1332 2227 593 2 1146 4918 76 27 11 chrX 73531786 73532413 -93117883 - L1Md_F2 LINE L1 -3 6579 5943 2 1146 5966 126 59 5 chrX 73532413 73533006 -93117290 - L1VL4 LINE L1 -5710 592 2 2 1146 1191 248 77 35 chrX 73533222 73533677 -93116619 + Lx7 LINE L1 5657 6130 -1566 2 1146 225 0 0 0 chrX 73534696 73534721 -93115575 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 1146 890 182 7 0 chrX 73534721 73534858 -93115438 - B1_Mus1 SINE Alu -10 138 1 2 1146 429 20 0 0 chrX 73535228 73535278 -93115018 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1146 1549 117 139 8 chrX 73536647 73536913 -93113383 + RLTR10A LTR ERVK 111 411 0 2 1146 1091 124 19 19 chrX 73536915 73537119 -93113177 + RLTR10-int LTR ERVK 304 577 -1410 2 1146 393 62 0 0 chrX 73537093 73537141 -93113155 + IAP-d-int LTR ERVK 130 177 -6365 3 1146 718 211 33 0 chrX 73537135 73537287 -93113009 + IAP-d-int LTR ERVK 347 503 -6039 3 1146 3123 77 5 0 chrX 73537287 73537679 -93112617 + IAP-d-int LTR ERVK 5007 5400 -1142 3 1146 1038 65 81 0 chrX 73537677 73537864 -93112432 + IAP-d-int LTR ERVK 5766 6011 -531 3 1146 1247 92 12 0 chrX 73537871 73538035 -93112261 + IAP-d-int LTR ERVK 6128 6293 -249 3 1146 3115 108 30 20 chrX 73538170 73538669 -93111627 + RLTR10-int LTR ERVK 1241 1744 -243 3 1146 1575 110 139 8 chrX 73538731 73538997 -93111299 + RLTR10A LTR ERVK 111 411 0 3 1146 10405 87 5 10 chrX 73538997 73540468 -93109828 - L1_Mm LINE L1 -2596 3287 1824 3 1146 12315 166 3 92 chrX 73540464 73541563 -93108733 + L1_Mur2 LINE L1 3311 4345 -1532 3 1146 2624 69 3 0 chrX 73541563 73541881 -93108415 + L1_Mus1 LINE L1 6247 6565 -2 3 1146 12315 166 3 92 chrX 73541881 73541904 -93108392 + L1_Mur2 LINE L1 4346 4346 -1531 3 1146 318 50 0 0 chrX 73541904 73541944 -93108352 + (GAAA)n Simple_repeat Simple_repeat 3 42 0 3 1146 12315 166 3 92 chrX 73541944 73542078 -93108218 + L1_Mur2 LINE L1 4346 4369 -1508 3 1146 1491 59 0 0 chrX 73542078 73542265 -93108031 + L1Md_F2 LINE L1 6396 6582 0 3 1146 12315 166 3 92 chrX 73542265 73543658 -93106638 + L1_Mur2 LINE L1 4370 5726 -151 3 1146 2127 89 14 0 chrX 73543956 73544249 -93106047 + L1Md_F2 LINE L1 5734 6030 -552 3 1146 432 238 71 32 chrX 73544593 73544719 -93105577 + B1F SINE Alu 19 149 0 3 1146 392 31 197 30 chrX 73545372 73545438 -93104858 + B1_Mur4 SINE Alu 69 145 -5 3 1146 232 200 120 0 chrX 73545763 73545813 -93104483 + B1_Mur1 SINE Alu 52 107 -42 4 1146 27 0 0 0 chrX 73547464 73547491 -93102805 + AT_rich Low_complexity Low_complexity 1 27 0 4 1146 1260 184 86 7 chrX 73547500 73547779 -93102517 - Lx3B LINE L1 -4 6969 6669 4 1146 632 73 9 44 chrX 73547782 73547896 -93102400 - L1Md_F2 LINE L1 -2 6580 6471 4 1146 1907 120 3 11 chrX 73547886 73548173 -93102123 - L1_Mus4 LINE L1 -2 6634 6350 4 1146 1047 157 1 1 chrX 73548173 73548348 -93101948 - L1VL4 LINE L1 -281 5602 5427 4 1146 3959 86 2 0 chrX 73548357 73548859 -93101437 - L1_Mus1 LINE L1 0 6567 6065 4 1146 473 261 149 21 chrX 73548920 73549155 -93101141 + RLTR10A LTR ERVK 147 411 0 4 1146 1866 99 15 0 chrX 73549155 73549417 -93100879 - L1_Mus1 LINE L1 -499 6068 5803 4 1146 13943 166 167 101 chrX 73549437 73550407 -93099889 - L1VL4 LINE L1 -421 5462 4859 4 1146 3718 71 18 0 chrX 73550407 73550857 -93099439 + L1_Mus1 LINE L1 6110 6567 0 4 1146 13943 166 167 101 chrX 73550857 73551954 -93098342 - L1VL4 LINE L1 -1025 4858 3489 4 1146 180 0 0 0 chrX 73551954 73551974 -93098322 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5 1146 13943 180 129 78 chrX 73551974 73554649 -93095647 - L1VL4 LINE L1 -2395 3488 499 4 1146 7856 110 44 3 chrX 73554664 73556580 -93093716 - Lx3B LINE L1 -299 6674 4701 5 1146 3551 110 31 25 chrX 73556590 73556686 -93093610 + L1_Mur1 LINE L1 3666 3759 -2127 5 1146 1310 34 0 0 chrX 73556686 73556833 -93093463 + B1_Mus2 SINE Alu 1 147 0 5 1146 210 37 0 0 chrX 73556833 73556860 -93093436 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1146 3551 110 31 25 chrX 73556860 73557351 -93092945 + L1_Mur1 LINE L1 3760 4256 -1630 5 1146 263 111 0 0 chrX 73557346 73557382 -93092914 - Lx3B LINE L1 -4413 1464 1429 5 1146 207 69 0 0 chrX 73557396 73557425 -93092871 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1146 645 246 43 8 chrX 73557429 73557702 -93092594 - Lx3B LINE L1 -4514 1366 1091 5 1146 257 286 132 0 chrX 73557707 73557798 -93092498 - B1_Mur4 SINE Alu -22 128 26 5 1146 935 271 28 46 chrX 73557800 73558191 -93092105 - L1_Mur3 LINE L1 -7240 472 89 5 1146 3131 188 41 64 chrX 73558196 73558974 -93091322 - Lx3B LINE L1 -6422 1306 547 5 1146 375 60 0 0 chrX 73561458 73561508 -93088788 + (CATA)n Simple_repeat Simple_repeat 2 51 0 5 1146 459 92 0 0 chrX 73561508 73561572 -93088724 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1146 911 204 0 0 chrX 73561577 73561734 -93088562 - RLTR33 LTR ERVK -2 676 520 6 1146 6290 95 25 7 chrX 73561735 73561983 -93088313 - L1_Mus3 LINE L1 0 6638 6374 6 1146 252 0 0 0 chrX 73561983 73562011 -93088285 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 6 1146 6290 95 25 7 chrX 73562011 73562630 -93087666 - L1_Mus3 LINE L1 -265 6373 5755 6 1146 1336 72 0 11 chrX 73562630 73562813 -93087483 + L1_Mus3 LINE L1 5644 5824 -814 6 1146 3391 99 55 14 chrX 73562813 73563324 -93086972 - RLTR33 LTR ERVK -146 532 1 6 1146 8736 31 19 0 chrX 73563430 73564436 -93085860 + L1Md_T LINE L1 5587 6582 0 6 1146 21 36 0 0 chrX 73564536 73564564 -93085732 + AT_rich Low_complexity Low_complexity 1 28 0 6 1146 370 177 14 127 chrX 73564597 73564739 -93085557 + Lx9 LINE L1 7518 7643 -1 6 1146 201 364 24 41 chrX 73564899 73565022 -93085274 - MIR SINE MIR -5 257 137 6 1146 3490 35 5 20 chrX 73565238 73565640 -93084656 + MTA_Mm LTR MaLR 1 396 0 6 1146 477 0 0 0 chrX 73565821 73565874 -93084422 + (TC)n Simple_repeat Simple_repeat 2 54 0 6 1146 189 0 0 0 chrX 73565874 73565894 -93084402 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1146 687 367 4 19 chrX 73565925 73566189 -93084107 - B4A SINE B4 -12 280 21 7 1146 472 285 47 29 chrX 73566458 73566628 -93083668 + ID_B1 SINE B4 46 218 -6 7 1146 752 179 8 0 chrX 73566498 73566632 -93083664 + B1_Mus2 SINE Alu 11 145 -2 7 1146 482 274 8 0 chrX 73566855 73566972 -93083324 - MTD LTR MaLR -295 124 7 7 1146 289 229 229 0 chrX 73566996 73567081 -93083215 + Lx9 LINE L1 7337 7443 -201 7 1146 315 49 0 0 chrX 73567081 73567122 -93083174 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 7 1146 359 232 132 0 chrX 73567122 73567283 -93083013 + Lx9 LINE L1 7444 7642 -2 7 1146 392 247 35 0 chrX 73568182 73568267 -93082029 + RLTR25A LTR ERVK 1 88 -1015 7 1146 240 59 0 0 chrX 73569426 73569460 -93080836 + (T)n Simple_repeat Simple_repeat 1 34 0 7 1146 353 368 94 10 chrX 73570729 73570921 -93079375 + MER44B DNA MER2_type 5 212 -338 7 1146 228 283 71 0 chrX 73570987 73571100 -93079196 + MER44B DNA MER2_type 353 473 -77 7 1146 2989 141 52 19 chrX 73571263 73571746 -93078550 - Lx LINE L1 -3 6651 6153 7 1146 378 301 35 9 chrX 73573075 73573189 -93077107 + RMER19C LTR ERVK 302 418 -193 8 1146 3195 165 11 67 chrX 73573193 73574393 -93075903 - L1VL4 LINE L1 -2247 1312 193 8 1146 615 187 29 7 chrX 73574397 73574537 -93075759 + RMER19B LTR ERVK 758 900 -2 8 1146 266 125 0 20 chrX 73575530 73575579 -93074717 + (TCTCCC)n Simple_repeat Simple_repeat 5 52 0 8 1146 195 42 0 0 chrX 73575579 73575603 -93074693 + (TG)n Simple_repeat Simple_repeat 1 24 0 8 1146 582 41 0 0 chrX 73576905 73576978 -93073318 + (CA)n Simple_repeat Simple_repeat 2 74 0 8 1146 845 209 33 0 chrX 73580892 73581074 -93069222 + URR1A DNA MER1_type 38 225 -1 8 1146 476 287 76 14 chrX 73582210 73582355 -93067941 + B3 SINE B2 58 211 -5 8 1146 413 307 140 45 chrX 73582529 73582773 -93067523 + Lx8 LINE L1 7126 7402 -71 8 1146 4156 225 21 12 chrX 73582773 73583623 -93066673 + RMER13A LTR ERVK 3 860 0 8 1146 413 307 140 45 chrX 73583623 73583692 -93066604 + Lx8 LINE L1 7403 7469 -4 8 1146 33821 80 1 16 chrX 73585223 73590539 -93059757 + L1Md_F2 LINE L1 354 5586 -297 9 1146 8432 57 4 0 chrX 73590539 73591531 -93058765 + L1Md_F2 LINE L1 5587 6582 0 9 1146 645 181 9 9 chrX 73591905 73592011 -93058285 - ETnERV2-int LTR ERVK -231 7175 7070 9 1146 25 0 0 0 chrX 73594016 73594041 -93056255 + AT_rich Low_complexity Low_complexity 1 25 0 9 1146 3335 276 63 48 chrX 73594500 73594788 -93055508 + Lx6 LINE L1 5882 6187 -1273 9 1146 1412 219 9 78 chrX 73594788 73595135 -93055161 + ORR1A4 LTR MaLR 3 325 -4 9 1146 3335 276 63 48 chrX 73595135 73595882 -93054414 + Lx6 LINE L1 6188 6941 -519 9 1146 5899 16 0 0 chrX 73595882 73596510 -93053786 + L1Md_A LINE L1 5955 6582 0 9 1146 3335 276 63 48 chrX 73596510 73596701 -93053595 + Lx6 LINE L1 6942 7127 -333 9 1146 1183 231 58 9 chrX 73596713 73597181 -93053115 - RMER6C LTR ERVK -11 679 141 9 1146 3742 126 61 2 chrX 73597181 73597792 -93052504 - L1_Mus3 LINE L1 -758 5125 4479 9 1146 7606 115 10 1 chrX 73597790 73599264 -93051032 + L1_Mus3 LINE L1 5135 6621 -17 9 1146 4744 46 0 0 chrX 73599260 73599824 -93050472 - L1_Mm LINE L1 -3 5880 5317 9 1146 333 0 0 0 chrX 73599830 73599867 -93050429 + (TATG)n Simple_repeat Simple_repeat 3 39 0 9 1146 686 188 45 0 chrX 73599867 73600000 -93050296 - RMER6C LTR ERVK -551 139 1 9 1146 976 275 34 22 chrX 73600000 73600323 -93049973 + Lx6 LINE L1 7123 7449 -11 1 1146 28 0 0 0 chrX 73600503 73600531 -93049765 + AT_rich Low_complexity Low_complexity 1 28 0 1 1146 1577 181 27 3 chrX 73601071 73601364 -93048932 + MTC LTR MaLR 1 300 -121 1 1146 426 157 19 10 chrX 73601489 73601592 -93048704 + (TA)n Simple_repeat Simple_repeat 2 105 0 1 1146 213 39 0 0 chrX 73604168 73604194 -93046102 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1 1146 845 252 254 13 chrX 73604216 73604598 -93045698 - Lx4B LINE L1 -49 7009 6536 1 1146 4986 194 25 16 chrX 73604601 73604649 -93045647 + L1_Mur2 LINE L1 2004 2049 -3828 1 1146 633 61 0 0 chrX 73604649 73604731 -93045565 + (CA)n Simple_repeat Simple_repeat 1 82 0 1 1146 573 15 0 0 chrX 73604731 73604796 -93045500 + (GA)n Simple_repeat Simple_repeat 2 67 0 1 1146 4986 194 25 16 chrX 73604796 73604974 -93045322 + L1_Mur2 LINE L1 2050 2228 -3649 1 1146 2959 39 21 0 chrX 73604974 73605309 -93044987 + ORR1A0 LTR MaLR 1 342 -4 1 1146 4986 194 25 16 chrX 73605309 73606168 -93044128 + L1_Mur2 LINE L1 2229 3099 -2778 1 1146 1009 194 58 113 chrX 73606170 73606556 -93043740 - RMER16 LTR ERVK 0 533 1 1 1146 923 158 0 0 chrX 73606556 73606727 -93043569 + L1_Mur2 LINE L1 3097 3267 -2610 1 1146 261 0 0 0 chrX 73606742 73606771 -93043525 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1 1146 194 91 0 29 chrX 73606773 73606807 -93043489 + (TTTC)n Simple_repeat Simple_repeat 4 36 0 1 1146 4365 101 8 2 chrX 73606828 73607413 -93042883 - L1Md_F2 LINE L1 -3 6579 5991 1 1146 27137 33 1 0 chrX 73607415 73613677 -93036619 + L1Md_T LINE L1 1 5589 -297 1 1146 8934 10 0 0 chrX 73613677 73614673 -93035623 + L1Md_T LINE L1 5590 6585 0 1 1146 1800 83 26 4 chrX 73614678 73614943 -93035353 - L1Md_F2 LINE L1 -578 6004 5734 1 1146 3854 92 7 3 chrX 73614936 73615504 -93034792 - L1_Mus1 LINE L1 -409 6158 5589 1 1146 1245 173 17 14 chrX 73615509 73615796 -93034500 + L1_Mur2 LINE L1 3299 3586 -2291 1 1146 1448 186 55 25 chrX 73615805 73616131 -93034165 + RLTR22_Mur LTR ERVK 1 336 -1512 1 1146 189 0 0 0 chrX 73616131 73616152 -93034144 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1146 558 0 0 0 chrX 73616473 73616535 -93033761 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 1146 9237 77 0 8 chrX 73616540 73618584 -93031712 - L1Md_F2 LINE L1 -19 6563 4537 1 1146 3974 174 24 2 chrX 73618563 73619388 -93030908 - L1Md_F2 LINE L1 -5649 1075 233 1 1146 1526 188 24 19 chrX 73619399 73619983 -93030313 - L1_Mur2 LINE L1 -4376 1501 918 1 1146 10100 84 16 1 chrX 73620483 73622562 -93027734 - L1Md_F2 LINE L1 -7 6575 4452 1 1146 661 214 27 20 chrX 73622693 73622841 -93027455 + B1_Mur3 SINE Alu 1 149 0 1 1146 240 100 0 0 chrX 73622841 73622881 -93027415 + (CAAAC)n Simple_repeat Simple_repeat 5 44 0 1 1146 4347 160 25 16 chrX 73623723 73624059 -93026237 + RMER17D2 LTR ERVK 1 337 -472 1 1146 396 0 0 0 chrX 73624059 73624103 -93026193 + (TCTCC)n Simple_repeat Simple_repeat 1 44 0 1 1146 4347 160 25 16 chrX 73624103 73624568 -93025728 + RMER17D2 LTR ERVK 338 809 0 1 1146 729 245 18 9 chrX 73624926 73625148 -93025148 + Lx7 LINE L1 7140 7363 -333 1 1146 244 308 19 0 chrX 73625282 73625386 -93024910 + Lx7 LINE L1 7562 7667 -29 1 1146 358 310 6 45 chrX 73625482 73625661 -93024635 + GA-rich Low_complexity Low_complexity 4 175 0 1 1146 189 0 0 0 chrX 73625721 73625742 -93024554 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 1 1146 543 53 0 0 chrX 73626272 73626347 -93023949 + (CAGAGA)n Simple_repeat Simple_repeat 2 76 0 1 1146 195 129 0 0 chrX 73626377 73626408 -93023888 + (GAAAA)n Simple_repeat Simple_repeat 3 33 0 1 1146 399 103 0 0 chrX 73626701 73626759 -93023537 + L1VL2 LINE L1 169 226 -6109 1 1146 11173 117 68 12 chrX 73626759 73629561 -93020735 + L1VL2 LINE L1 9 2988 -627 1 1146 22 0 0 0 chrX 73630403 73630425 -93019871 + AT_rich Low_complexity Low_complexity 1 22 0 1 1146 246 62 0 0 chrX 73630428 73630460 -93019836 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 1146 216 122 0 0 chrX 73630463 73630504 -93019792 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 1 1146 287 287 40 16 chrX 73631039 73631183 -93019113 - L1MB3 LINE L1 -169 6002 5855 1 1146 382 353 41 35 chrX 73631998 73632195 -93018101 + B3A SINE B2 1 198 0 1 1146 1899 156 3 55 chrX 73632253 73632598 -93017698 + ORR1A2 LTR MaLR 1 327 0 1 1146 246 259 0 0 chrX 73632682 73632740 -93017556 - Lx4B LINE L1 -830 6228 6171 1 1146 242 357 88 9 chrX 73633028 73633141 -93017155 - B1F2 SINE Alu -5 144 23 1 1146 399 337 77 24 chrX 73633472 73633642 -93016654 - B3A SINE B2 -16 182 4 1 1146 429 305 53 8 chrX 73634120 73634252 -93016044 + B1F SINE Alu 6 143 -6 1 1146 231 196 0 35 chrX 73634533 73634591 -93015705 + L1M3 LINE L1 5814 5869 -311 1 1146 188 34 0 33 chrX 73634718 73634748 -93015548 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1146 231 296 119 77 chrX 73636121 73636315 -93013981 + MER58B DNA MER1_type 135 336 -5 1 1146 1274 246 60 12 chrX 73636554 73636887 -93013409 - MTD LTR MaLR -68 351 3 1 1146 22 35 0 0 chrX 73637326 73637355 -93012941 + AT_rich Low_complexity Low_complexity 1 29 0 1 1146 288 0 0 0 chrX 73637647 73637679 -93012617 + (CATA)n Simple_repeat Simple_repeat 1 32 0 1 1146 647 305 57 11 chrX 73637680 73637856 -93012440 - B3 SINE B2 -32 184 1 1 1146 443 341 17 6 chrX 73637891 73638068 -93012228 - B3A SINE B2 -19 179 1 1 1146 315 0 0 0 chrX 73638256 73638291 -93012005 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 1146 333 0 0 0 chrX 73638291 73638327 -93011969 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 1146 5262 117 60 5 chrX 73638873 73639315 -93010981 - RMER17D LTR ERVK -3 886 433 1 1146 297 0 0 0 chrX 73639315 73639348 -93010948 + (CAGAGA)n Simple_repeat Simple_repeat 4 36 0 1 1146 5262 117 60 5 chrX 73639348 73639745 -93010551 - RMER17D LTR ERVK -457 432 2 1 1146 979 101 0 54 chrX 73640189 73640326 -93009970 + B1_Mm SINE Alu 3 134 -13 1 1146 216 0 0 0 chrX 73640326 73640350 -93009946 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 1146 564 56 0 0 chrX 73640507 73640579 -93009717 + (CA)n Simple_repeat Simple_repeat 2 73 0 1 1146 539 314 10 153 chrX 73640949 73641257 -93009039 - MTE2a LTR MaLR -113 266 3 1 1146 394 337 68 55 chrX 73641490 73641874 -93008422 + L1MB8 LINE L1 5489 5879 -295 1 1146 301 339 62 0 chrX 73641877 73642007 -93008289 + B1F2 SINE Alu 6 143 -6 1 1146 32893 51 6 8 chrX 73643373 73648557 -93001739 + L1Md_F2 LINE L1 422 5586 -297 1 1146 7639 63 2 12 chrX 73648557 73649561 -93000735 + L1Md_F2 LINE L1 5587 6580 -2 1 1146 363 73 0 0 chrX 73649758 73649813 -93000483 + (TTTTA)n Simple_repeat Simple_repeat 2 56 0 1 1146 27 0 0 0 chrX 73650642 73650669 -92999627 + AT_rich Low_complexity Low_complexity 1 27 0 1 1146 267 103 0 0 chrX 73651041 73651080 -92999216 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 1 1146 753 201 35 43 chrX 73652191 73652417 -92997879 - ORR1B2 LTR MaLR -3 371 142 1 1146 810 245 40 10 chrX 73652974 73653172 -92997124 - ORR1B2 LTR MaLR -150 217 14 1 1146 3641 206 66 27 chrX 73653175 73654066 -92996230 - ORR1B2-int LTR MaLR -2 1507 582 1 1146 7180 30 6 5 chrX 73654084 73654947 -92995349 + L1Md_F3 LINE L1 5721 6584 0 1 1146 663 240 17 6 chrX 73654950 73655122 -92995174 + Lx6 LINE L1 7148 7321 -139 1 1146 698 158 74 14 chrX 73655167 73655315 -92994981 + Lx6 LINE L1 7293 7449 -11 1 1146 2467 204 4 79 chrX 73655348 73655903 -92994393 - ORR1B2-int LTR MaLR -996 513 1 1 1146 917 193 254 48 chrX 73655920 73656033 -92994263 - ORR1B2 LTR MaLR -39 328 205 1 1146 1545 179 47 168 chrX 73656033 73656522 -92993774 - RLTR23 LTR ERV1 0 430 1 1 1146 917 193 254 48 chrX 73656522 73656680 -92993616 - ORR1B2 LTR MaLR -163 204 1 1 1146 691 307 69 0 chrX 73656832 73657034 -92993262 - B3 SINE B2 0 216 1 1 1146 22 0 0 0 chrX 73657314 73657336 -92992960 + AT_rich Low_complexity Low_complexity 1 22 0 1 1146 480 158 34 0 chrX 73658039 73658150 -92992146 + RMER3D-int LTR ERVK 489 583 -2259 1 1146 384 190 14 34 chrX 73658175 73658322 -92991974 + G-rich Low_complexity Low_complexity 5 148 0 1 1146 1807 175 103 18 chrX 73658362 73658858 -92991438 + RMER3D-int LTR ERVK 1014 1532 -1310 1 1146 516 182 66 59 chrX 73658900 73659052 -92991244 + RMER3D-int LTR ERVK 1542 1694 -1148 1 1146 1927 193 112 18 chrX 73659058 73659676 -92990620 + MYSERV16_I-int LTR ERVK 1311 1986 -340 1 1146 1759 117 0 0 chrX 73659739 73659995 -92990301 + BGLII LTR ERVK 4 259 -162 1 1146 1449 98 5 5 chrX 73659995 73660201 -92990095 - LTRIS2 LTR ERV1 0 564 359 1 1146 2788 132 11 7 chrX 73660201 73660636 -92989660 + RLTR1C LTR ERV1 3 439 -64 1 143 31898 82 3 1 chrX 73660636 73666829 -92983467 - L1Md_F2 LINE L1 -2 6580 371 1 1147 3121 120 24 4 chrX 73666836 73667337 -92982959 - RMER16-int LTR ERVK -4212 1194 684 1 1147 967 128 60 22 chrX 73667316 73667500 -92982796 - RMER16-int LTR ERVK -5075 331 141 1 1147 4198 68 3 14 chrX 73668135 73668699 -92981597 - LTRIS2 LTR ERV1 -6 558 1 1 1147 1235 72 0 18 chrX 73668699 73668868 -92981428 + BGLII LTR ERVK 256 421 0 1 1147 227 338 42 0 chrX 73668954 73669025 -92981271 - PB1D7 SINE Alu -41 79 6 1 1147 227 204 0 0 chrX 73669174 73669223 -92981073 + T-rich Low_complexity Low_complexity 1 49 0 1 1147 1807 204 47 17 chrX 73669369 73669808 -92980488 - BGLII_B LTR ERVK -5 436 3 1 1147 257 278 0 0 chrX 73669858 73669912 -92980384 - B3 SINE B2 -22 194 141 1 1147 320 309 31 31 chrX 73670351 73670448 -92979848 + B3A SINE B2 2 98 -100 1 1147 256 131 49 0 chrX 73670556 73670617 -92979679 + Lx9 LINE L1 7421 7484 -160 1 1147 3826 211 51 15 chrX 73671108 73672583 -92977713 + L1_Mur3 LINE L1 414 1920 -3960 1 1147 255 31 0 0 chrX 73672583 73672615 -92977681 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 1147 3055 208 75 16 chrX 73672615 73672729 -92977567 + L1_Mur3 LINE L1 1921 2067 -3813 1 1147 1052 50 7 0 chrX 73672729 73672868 -92977428 + (GA)n Simple_repeat Simple_repeat 1 140 0 1 1147 3055 208 75 16 chrX 73672868 73672994 -92977302 + L1_Mur3 LINE L1 2068 2197 -3683 1 1147 3031 225 29 92 chrX 73673023 73674744 -92975552 + L1_Mur2 LINE L1 882 2587 -3293 1 1147 1656 142 47 14 chrX 73674956 73675234 -92975062 + RLTR33 LTR ERVK 1 287 -391 1 1147 3815 176 29 0 chrX 73675295 73676085 -92974211 + L1_Mur2 LINE L1 3485 4297 -1583 1 1147 2869 58 20 8 chrX 73676086 73676487 -92973809 - RLTR9F LTR ERVK -4 411 6 1 1147 607 100 8 91 chrX 73676495 73676627 -92973669 + L1_Mur2 LINE L1 4294 4414 -1466 1 1147 2837 206 66 37 chrX 73677036 73677853 -92972443 + L1_Mur2 LINE L1 4410 5250 -630 1 1147 613 216 126 14 chrX 73677852 73678079 -92972217 + L1_Mur2 LINE L1 5049 5294 -583 1 1147 1130 138 11 5 chrX 73678079 73678268 -92972028 + B2_Mm2 SINE B2 5 194 -1 1 1147 531 245 81 37 chrX 73678268 73678289 -92972007 + L1_Mur2 LINE L1 5288 5308 -572 1 1147 6918 143 32 14 chrX 73678315 73679507 -92970789 - Lx2 LINE L1 -1 6996 5784 1 1147 246 32 0 0 chrX 73679700 73679731 -92970565 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1147 22 80 0 0 chrX 73679933 73679983 -92970313 + AT_rich Low_complexity Low_complexity 1 50 0 1 1147 304 318 11 11 chrX 73680646 73680735 -92969561 + PB1D10 SINE Alu 27 115 -2 1 1147 5541 111 55 9 chrX 73680879 73682551 -92967745 - L1VL2 LINE L1 -1789 1826 67 1 1147 5249 192 3 19 chrX 73682561 73683627 -92966669 - L1_Mm LINE L1 -93 5790 4738 2 1147 284 0 28 0 chrX 73683627 73683663 -92966633 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2 1147 5249 192 3 19 chrX 73683663 73683728 -92966568 - L1_Mm LINE L1 -1146 4737 4677 2 1147 254 50 0 24 chrX 73683728 73683769 -92966527 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 1147 6692 151 25 15 chrX 73683769 73685788 -92964508 - L1_Mus3 LINE L1 -36 6602 4348 2 1147 8821 135 44 6 chrX 73685785 73685888 -92964408 + MusHAL1 LINE L1 697 806 -1906 2 1147 189 0 0 0 chrX 73685888 73685909 -92964387 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 2 1147 8821 135 44 6 chrX 73685909 73687472 -92962824 + MusHAL1 LINE L1 807 2427 -285 2 1147 289 169 0 0 chrX 73687520 73687579 -92962717 - L1_Mm LINE L1 -1200 4683 4625 2 1147 11140 169 127 5 chrX 73687574 73690119 -92960177 - L1_Mur1 LINE L1 -308 5578 2722 2 1147 1524 149 0 20 chrX 73690146 73690400 -92959896 - L1_Mus4 LINE L1 -6 6630 6382 2 1147 1054 142 0 0 chrX 73690400 73690583 -92959713 + L1_Mus4 LINE L1 6199 6381 -257 2 1147 455 228 26 0 chrX 73690573 73690687 -92959609 + L1_Mur2 LINE L1 5301 5417 -463 1 1147 486 243 47 7 chrX 73690684 73690833 -92959463 + L1_Mur2 LINE L1 5519 5673 -204 1 1147 352 177 10 50 chrX 73690839 73690940 -92959356 - Lx2 LINE L1 -18 6979 6883 2 1147 12481 33 0 0 chrX 73690940 73692525 -92957771 - L1Md_T LINE L1 -1860 4023 2439 2 1147 610 75 0 11 chrX 73692522 73692616 -92957680 + L1Md_T LINE L1 4071 4163 -1720 2 1147 8782 40 2 1 chrX 73692609 73693736 -92956560 + L1Md_T LINE L1 4457 5584 -299 2 1147 7552 61 5 5 chrX 73693738 73694629 -92955667 + L1Md_T LINE L1 5587 6477 -105 2 1147 206 32 32 0 chrX 73694629 73694660 -92955636 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 1147 7552 61 5 5 chrX 73694660 73694751 -92955545 + L1Md_T LINE L1 6478 6569 -13 2 1147 187 401 94 0 chrX 73695029 73695221 -92955075 + MIRb SINE MIR 1 210 -58 2 1147 16762 106 12 53 chrX 73695244 73698164 -92952132 + L1Md_F2 LINE L1 2867 5665 -218 2 1147 4467 135 75 27 chrX 73698164 73699016 -92951280 + RLTR13B1 LTR ERVK 1 893 0 2 1147 3562 86 14 0 chrX 73699016 73699529 -92950767 + L1Md_F2 LINE L1 5660 6179 -403 2 1147 1599 188 26 13 chrX 73699533 73699846 -92950450 - ORR1A4 LTR MaLR -29 317 1 2 1147 2379 197 124 54 chrX 73699846 73700637 -92949659 - ORR1A4-int LTR MaLR -27 1482 638 2 1147 1124 144 25 0 chrX 73700642 73700843 -92949453 - MurERV4_19-int LTR ERVK -1485 4295 4090 2 1147 4307 192 64 82 chrX 73700852 73701920 -92948376 + MurERV4_19-int LTR ERVK 4330 5386 -394 2 1147 306 0 0 0 chrX 73701920 73701954 -92948342 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1147 4307 192 64 82 chrX 73701954 73702363 -92947933 + MurERV4_19-int LTR ERVK 5387 5779 -1 2 1147 2005 213 152 40 chrX 73702386 73702879 -92947417 + RMER19B LTR ERVK 311 870 -32 2 1147 2764 96 39 3 chrX 73702879 73703265 -92947031 + MTB LTR MaLR 1 400 0 2 1147 2005 213 152 40 chrX 73703265 73703303 -92946993 + RMER19B LTR ERVK 871 902 0 2 1147 3441 185 35 0 chrX 73703307 73703632 -92946664 - ORR1A4-int LTR MaLR -1281 682 351 2 1147 207 0 0 0 chrX 73703632 73703655 -92946641 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1147 3441 185 35 0 chrX 73703655 73703987 -92946309 - ORR1A4-int LTR MaLR -1613 350 3 2 1147 1925 158 3 9 chrX 73703988 73704319 -92945977 - ORR1A4 LTR MaLR 0 329 1 2 1147 1579 297 48 29 chrX 73704319 73705269 -92945027 + Lx6 LINE L1 5870 7257 -203 2 1147 3938 123 164 62 chrX 73705269 73706091 -92944205 + RMER17A2 LTR ERVK 1 906 0 2 1147 1579 285 16 20 chrX 73706091 73706270 -92944026 + Lx6 LINE L1 7258 7434 -26 2 1147 5500 237 80 9 chrX 73706283 73708280 -92942016 + Lx7 LINE L1 5230 7366 -330 2 1147 311 250 30 10 chrX 73708341 73708442 -92941854 + Lx7 LINE L1 7355 7457 -239 2 1147 1648 222 86 11 chrX 73708488 73708908 -92941388 + Lx4A LINE L1 587 1039 -6047 2 1147 252 0 0 0 chrX 73708908 73708936 -92941360 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 1147 1648 222 86 11 chrX 73708936 73708971 -92941325 + Lx4A LINE L1 1040 1075 -6011 2 1147 882 115 0 7 chrX 73709203 73709352 -92940944 + L1_Mm LINE L1 3841 3988 -1895 2 1147 612 144 9 0 chrX 73709353 73709464 -92940832 + Lx4A LINE L1 1718 1829 -4048 2 1147 33918 46 0 3 chrX 73709476 73714861 -92935435 + L1Md_T LINE L1 124 5589 -297 2 1147 8493 32 0 0 chrX 73714861 73715857 -92934439 + L1Md_T LINE L1 5590 6585 0 2 1147 1303 135 23 0 chrX 73715857 73716116 -92934180 + Lx4A LINE L1 1825 2089 -3788 2 1147 2228 191 127 119 chrX 73716116 73716722 -92933574 - RMER19C LTR ERVK 0 611 1 2 1147 6511 148 26 23 chrX 73716724 73718044 -92932252 + Lx4A LINE L1 2086 3409 -2468 2 1147 2675 157 19 80 chrX 73718046 73718653 -92931643 + Lx4A LINE L1 4724 5296 -581 2 1147 225 0 0 0 chrX 73718653 73718678 -92931618 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 2 1147 1280 73 6 0 chrX 73718680 73718857 -92931439 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 2 1147 2675 157 19 80 chrX 73718857 73718918 -92931378 + Lx4A LINE L1 5297 5352 -525 2 1147 610 80 20 20 chrX 73718915 73719017 -92931279 + Lx3C LINE L1 6112 6213 -763 2 1147 709 266 57 48 chrX 73719021 73719356 -92930940 - RLTR10D LTR ERVK -21 338 1 2 1147 4298 136 37 0 chrX 73719379 73720085 -92930211 + Lx3C LINE L1 6231 6962 -14 2 1147 2723 127 51 0 chrX 73720085 73720690 -92929606 + Lx4A LINE L1 5372 6012 -1046 2 1147 602 144 0 0 chrX 73720688 73720785 -92929511 + L1VL1 LINE L1 189 285 -6137 2 1147 260 122 0 0 chrX 73720785 73720826 -92929470 + L1VL1 LINE L1 124 164 -6258 2 1147 1939 194 33 8 chrX 73720845 73721244 -92929052 + Lx4B LINE L1 6645 7053 -5 2 1147 27 0 0 0 chrX 73721246 73721273 -92929023 + AT_rich Low_complexity Low_complexity 1 27 0 2 1147 1550 190 39 60 chrX 73721602 73721938 -92928358 + ORR1A4 LTR MaLR 1 329 0 2 1147 10493 179 56 18 chrX 73722884 73726562 -92923734 - Lx2 LINE L1 0 6997 3177 2 1147 318 26 0 0 chrX 73726562 73726601 -92923695 + (CAA)n Simple_repeat Simple_repeat 1 39 0 2 1147 10493 196 69 27 chrX 73726601 73726642 -92923654 - Lx2 LINE L1 -2701 3176 3133 2 1147 4357 209 17 17 chrX 73726659 73727529 -92922767 - RMER13B LTR ERVK -38 870 1 2 1147 4335 170 40 8 chrX 73727529 73728497 -92921799 - MusHAL1 LINE L1 -772 1940 942 2 1147 6348 83 28 3 chrX 73728492 73729816 -92920480 - L1Md_F2 LINE L1 -12 6570 5210 2 1147 452 132 0 24 chrX 73729815 73729900 -92920396 - MusHAL1 LINE L1 -1758 954 872 2 1147 13365 125 27 5 chrX 73729930 73731117 -92919179 - MusHAL1 LINE L1 -5 2707 1506 2 1147 225 0 0 0 chrX 73731117 73731142 -92919154 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 2 1147 13365 125 27 5 chrX 73731142 73732358 -92917938 - MusHAL1 LINE L1 -1207 1505 253 2 1147 267 103 0 0 chrX 73732358 73732397 -92917899 + (T)n Simple_repeat Simple_repeat 1 39 0 2 1147 425 283 105 53 chrX 73732399 73732589 -92917707 - MTE2a LTR MaLR -70 309 110 2 1147 251 316 135 57 chrX 73732587 73732869 -92917427 - RMER17C LTR ERVK -38 372 69 2 1147 6092 115 25 6 chrX 73732897 73733950 -92916346 - L1Md_F2 LINE L1 -22 6560 5486 2 1147 12224 130 23 151 chrX 73733937 73737027 -92913269 - L1Md_F2 LINE L1 -1939 3944 1254 2 1147 246 32 0 0 chrX 73737027 73737058 -92913238 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 2 1147 12224 193 53 22 chrX 73737058 73737847 -92912449 - L1Md_F2 LINE L1 -4630 1253 517 2 1147 1369 114 30 1 chrX 73737872 73738243 -92912053 - L1VL4 LINE L1 -2451 1108 729 2 1147 7434 92 5 5 chrX 73738229 73740013 -92910283 - L1Md_F2 LINE L1 -6 6576 4797 2 1147 1941 240 61 85 chrX 73740013 73740756 -92909540 - L1VL4 LINE L1 -5576 726 2 2 1147 3714 46 0 17 chrX 73740986 73741454 -92908842 - L1Md_F2 LINE L1 0 6582 6123 2 1147 5285 52 0 28 chrX 73741454 73741570 -92908726 + L1Md_F2 LINE L1 5186 5301 -582 2 1147 1559 52 0 10 chrX 73741570 73741763 -92908533 + B2_Mm1a SINE B2 1 191 -2 2 1147 5285 50 0 10 chrX 73741763 73742609 -92907687 + L1Md_F2 LINE L1 5302 6128 -454 2 1147 518 335 68 23 chrX 73742860 73743037 -92907259 + B3 SINE B2 21 205 -11 2 1147 810 262 30 68 chrX 73743193 73743558 -92906738 - Lx7 LINE L1 0 7696 7346 2 1147 246 136 0 0 chrX 73743588 73743632 -92906664 + (GGAA)n Simple_repeat Simple_repeat 2 45 0 2 1147 340 267 94 22 chrX 73743658 73743796 -92906500 - Lx7 LINE L1 -354 7342 7195 2 1147 966 199 25 152 chrX 73743799 73744155 -92906141 - RLTRETN_Mm LTR ERVK 0 322 12 2 1147 455 110 23 68 chrX 73744159 73744247 -92906049 - ETnERV2-int LTR ERVK 0 7406 7323 2 1147 608 249 255 12 chrX 73744247 73744572 -92905724 - RLTR13D6 LTR ERVK -371 531 128 2 1147 6184 128 14 4 chrX 73744573 73745516 -92904780 - ETnERV2-int LTR ERVK -228 7178 6227 2 1147 4759 154 21 33 chrX 73745622 73746806 -92903490 - MMETn-int LTR ERVK -2003 3403 2310 2 1147 1888 155 11 8 chrX 73746803 73747174 -92903122 - ETnERV2-int LTR ERVK -3549 3857 3486 2 1147 2483 131 15 53 chrX 73747433 73748091 -92902205 - MMETn-int LTR ERVK -4387 3019 1730 2 1147 5483 128 57 69 chrX 73748089 73749270 -92901026 - MMETn-int LTR ERVK -3675 1169 3 2 1147 1081 180 25 162 chrX 73749276 73749634 -92900662 - RLTRETN_Mm LTR ERVK -2 320 12 2 1147 4628 252 66 9 chrX 73749637 73751247 -92899049 - Lx7 LINE L1 -497 7199 5488 2 1147 6844 68 41 5 chrX 73751247 73752172 -92898124 - RLTR13A2 LTR ERVK 0 958 1 2 1147 1858 188 52 21 chrX 73752172 73752215 -92898081 - Lx7 LINE L1 -393 5487 5448 2 1147 2614 129 22 5 chrX 73752729 73753143 -92897153 + BGLII LTR ERVK 1 421 0 2 1147 1709 226 63 8 chrX 73753412 73753809 -92896487 + MTC LTR MaLR 1 419 -2 2 1147 5475 89 9 23 chrX 73753966 73754741 -92895555 + L1Md_F2 LINE L1 5818 6581 -1 2 1147 13970 106 9 8 chrX 73754779 73756884 -92893412 - L1_Mur1 LINE L1 -218 5668 3559 2 1147 6172 69 76 5 chrX 73756884 73757716 -92892580 + RLTR13B1 LTR ERVK 1 891 -2 2 1147 13970 106 9 8 chrX 73757716 73757840 -92892456 - L1_Mur1 LINE L1 -2328 3558 3436 2 1147 8521 100 17 3 chrX 73757963 73759262 -92891034 + Lx3_Mus LINE L1 5693 7009 0 2 1147 18348 138 20 36 chrX 73760169 73762545 -92887751 - L1_Mus3 LINE L1 -10 6628 4344 2 1147 1187 100 0 11 chrX 73762545 73762727 -92887569 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2 1147 1001 89 0 0 chrX 73762731 73762866 -92887430 - B1_Mus1 SINE Alu -13 135 1 2 1147 18348 153 22 55 chrX 73762866 73764433 -92885863 - L1_Mus3 LINE L1 -1540 4343 2811 2 1147 191 22 130 0 chrX 73764433 73764479 -92885817 + (TTATG)n Simple_repeat Simple_repeat 1 52 0 2 1147 18348 153 22 55 chrX 73764479 73765196 -92885100 - L1_Mus3 LINE L1 -3073 2810 2074 2 1147 3418 133 6 9 chrX 73765196 73765733 -92884563 - RMER17B LTR ERVK -423 535 1 2 1147 3265 176 16 14 chrX 73765733 73766961 -92883335 - L1VL4 LINE L1 -2182 1377 148 2 1147 469 220 0 0 chrX 73766978 73767078 -92883218 - L1M2 LINE L1 -2392 3751 3652 2 1147 12883 116 34 37 chrX 73767081 73769515 -92880781 - MusHAL1 LINE L1 -287 2425 1 2 1147 1342 270 94 20 chrX 73769508 73770060 -92880236 - L1VL4 LINE L1 -5513 789 197 2 1147 276 130 0 0 chrX 73770674 73770720 -92879576 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 2 1147 552 206 90 22 chrX 73770728 73770862 -92879434 - B1_Mur4 SINE Alu -7 143 1 2 1147 195 42 0 0 chrX 73770869 73770893 -92879403 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 1147 738 95 0 0 chrX 73770893 73771018 -92879278 + (GA)n Simple_repeat Simple_repeat 1 126 0 2 1147 1580 238 77 0 chrX 73771388 73771779 -92878517 - MTC LTR MaLR 0 421 1 2 1147 1433 242 3 12 chrX 73772462 73772889 -92877407 + Lx7 LINE L1 5507 5933 -1763 2 1147 791 214 0 0 chrX 73772889 73773034 -92877262 + B1_Mus2 SINE Alu 1 145 -2 2 1147 365 295 9 18 chrX 73773038 73773152 -92877144 + MusHAL1 LINE L1 194 306 -3048 2 1147 2957 88 5 16 chrX 73773212 73773402 -92876894 - BGLII LTR ERVK 0 421 237 2 1147 4390 147 16 72 chrX 73773402 73773851 -92876445 - RMER17D LTR ERVK 0 889 447 2 1147 330 26 0 0 chrX 73773851 73773890 -92876406 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 1147 4390 147 16 72 chrX 73773890 73774382 -92875914 - RMER17D LTR ERVK -443 446 1 2 1147 2957 88 5 16 chrX 73774382 73774617 -92875679 - BGLII LTR ERVK -185 236 1 2 1147 247 357 0 0 chrX 73774625 73774723 -92875573 - L1VL4 LINE L1 -5859 443 346 2 1147 15228 110 24 26 chrX 73774719 73777148 -92873148 + L1VL4 LINE L1 478 2914 -645 2 1147 2773 99 17 29 chrX 73777148 73777562 -92872734 - RLTR9E LTR ERVK 0 409 1 2 1147 15228 105 24 27 chrX 73777562 73778222 -92872074 + L1VL4 LINE L1 2915 3559 0 2 1147 14147 186 49 26 chrX 73778262 73779010 -92871286 + Lx2 LINE L1 2379 3147 -2739 2 1147 4540 210 17 11 chrX 73779010 73779912 -92870384 + RMER13B LTR ERVK 1 907 -1 2 1147 14147 186 49 26 chrX 73779912 73781474 -92868822 + Lx2 LINE L1 3148 4736 -1150 2 1147 342 0 0 0 chrX 73781474 73781512 -92868784 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2 1147 14147 153 30 26 chrX 73781512 73783752 -92866544 + Lx2 LINE L1 4737 6997 0 2 1147 286 312 18 0 chrX 73783772 73783884 -92866412 + Lx7 LINE L1 5927 6040 -1656 2 1147 343 300 171 48 chrX 73785178 73785553 -92864743 - L1MB7 LINE L1 -282 5902 5482 2 1147 756 325 46 75 chrX 73785809 73786213 -92864083 + MTE2a LTR MaLR 18 405 -14 2 1147 2531 291 49 38 chrX 73788586 73789405 -92860891 + ORR1C2-int LTR MaLR 535 1362 -8 2 1147 602 273 124 50 chrX 73789413 73789800 -92860496 + ORR1C2 LTR MaLR 1 394 0 2 1147 682 223 130 32 chrX 73790507 73790764 -92859532 + ORR1C2-int LTR MaLR 1144 1508 -1 2 1147 374 213 38 0 chrX 73790765 73790846 -92859450 + ORR1C2 LTR MaLR 1 87 -307 2 1147 388 324 5 75 chrX 73791146 73791346 -92858950 + B3A SINE B2 2 187 -11 3 1147 533 328 25 15 chrX 73791360 73791561 -92858735 + B3 SINE B2 3 205 -11 3 1147 371 61 0 0 chrX 73791922 73791971 -92858325 - L1Md_F3 LINE L1 -573 6011 5963 3 143 36726 37 6 7 chrX 73791969 73798136 -92852160 - L1Md_T LINE L1 -1 6581 416 3 1148 7744 116 14 1 chrX 73798123 73799504 -92850792 - L1Md_T LINE L1 -579 6003 4602 3 1148 33826 75 2 13 chrX 73799501 73805669 -92844627 - L1Md_F2 LINE L1 -1 6581 487 3 1148 452 144 11 53 chrX 73805670 73805765 -92844531 - L1Md_T LINE L1 -1269 4614 4524 3 1148 12895 111 14 18 chrX 73805764 73808016 -92842280 - MusHAL1 LINE L1 -470 2242 1 3 1148 994 122 12 6 chrX 73808024 73808197 -92842099 - L1VL2 LINE L1 -5506 829 656 3 1148 811 298 21 101 chrX 73808197 73808663 -92841633 + RLTR31_Mur LTR ERVK 104 532 -21 3 1148 2744 207 110 23 chrX 73808698 73809406 -92840890 - RLTR25A LTR ERVK -278 825 1 3 1148 313 250 47 0 chrX 73809782 73809846 -92840450 - B3 SINE B2 -71 145 79 3 1148 1314 181 4 4 chrX 73809863 73810130 -92840166 - L1Md_F LINE L1 -6078 441 175 3 1148 8056 117 29 2 chrX 73810118 73812175 -92838121 - L1Md_F LINE L1 -3389 2494 380 3 1148 561 298 34 23 chrX 73812293 73812468 -92837828 + ORR1D2 LTR MaLR 5 181 -193 3 1148 411 195 0 0 chrX 73812474 73812602 -92837694 + CT-rich Low_complexity Low_complexity 1 128 0 3 1148 724 247 106 6 chrX 73812602 73812781 -92837515 + ORR1D2 LTR MaLR 166 362 -8 3 1148 1005 277 106 20 chrX 73813015 73813372 -92836924 + MTD LTR MaLR 18 405 -14 3 1148 207 0 0 0 chrX 73813514 73813537 -92836759 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 1148 902 345 65 20 chrX 73813713 73814241 -92836055 + Lx7 LINE L1 6400 6955 -741 3 1148 396 40 0 0 chrX 73814241 73814291 -92836005 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1148 902 357 63 15 chrX 73814291 73814522 -92835774 + Lx7 LINE L1 6952 7197 -276 3 1148 11884 183 69 72 chrX 73814679 73817212 -92833084 + RMER16-int LTR ERVK 180 2674 -2732 3 1148 1392 230 204 35 chrX 73817212 73817668 -92832628 - RMER16 LTR ERVK 0 533 1 3 1148 11884 219 56 56 chrX 73817668 73818903 -92831393 + RMER16-int LTR ERVK 2675 3557 -1849 3 1148 269 327 9 0 chrX 73820236 73820346 -92829950 + RNERVK23-int LTR ERVK 7423 7533 -684 3 1148 368 286 29 36 chrX 73821208 73821346 -92828950 + RLTR8 LTR ERVK 229 365 0 3 1148 479 237 68 30 chrX 73821352 73821587 -92828709 + L1M3 LINE L1 4444 4687 -1453 3 1148 423 0 0 0 chrX 73821589 73821636 -92828660 + (TAA)n Simple_repeat Simple_repeat 3 49 0 3 1148 1220 206 157 26 chrX 73821636 73822134 -92828162 + Lx9 LINE L1 4915 5477 -370 3 1148 1481 262 43 25 chrX 73822135 73822664 -92827632 + Lx9 LINE L1 5596 6134 -1510 3 1148 1635 240 38 9 chrX 73822660 73823109 -92827187 + Lx9 LINE L1 6759 7220 -424 3 1148 230 340 19 87 chrX 73823281 73823321 -92826975 + MTE2b LTR MaLR 3 44 -335 3 1148 965 168 118 5 chrX 73823321 73823524 -92826772 - URR1A DNA MER1_type 0 226 1 3 1148 230 340 19 87 chrX 73823524 73823586 -92826710 + MTE2b LTR MaLR 45 98 -281 3 1148 882 318 39 0 chrX 73823586 73823841 -92826455 + MTE2b LTR MaLR 58 322 -57 3 1148 201 242 29 29 chrX 73823894 73823962 -92826334 + L3 LINE CR1 2534 2601 -1888 3 1148 6060 137 29 12 chrX 73824068 73825171 -92825125 - Lx LINE L1 -5 6649 5528 3 1148 6079 118 12 14 chrX 73825171 73827054 -92823242 - L1VL4 LINE L1 -1704 1855 1 3 1148 2602 132 57 41 chrX 73827074 73827563 -92822733 - L1VL2 LINE L1 -5737 598 102 3 1148 432 0 0 0 chrX 73829633 73829681 -92820615 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1148 251 222 13 40 chrX 73829716 73829791 -92820505 - MTD LTR MaLR -2 417 345 3 1148 515 302 71 14 chrX 73829907 73830189 -92820107 + L1_Rod LINE L1 1985 2282 -3565 3 1148 578 51 0 13 chrX 73830257 73830336 -92819960 + (GAAAA)n Simple_repeat Simple_repeat 2 79 0 3 1148 1208 264 13 56 chrX 73830474 73830940 -92819356 + L1_Rod LINE L1 167 612 -6560 3 1148 1289 199 79 0 chrX 73830960 73831227 -92819069 + ORR1B1 LTR MaLR 66 353 -41 3 1148 4332 174 23 27 chrX 73831245 73832931 -92817365 + L1Md_F LINE L1 386 2018 -1896 3 1148 6362 47 9 25 chrX 73832932 73834489 -92815807 + L1Md_A LINE L1 406 1933 -3950 3 1148 23683 39 143 0 chrX 73834488 73838553 -92811743 - L1Md_T LINE L1 -12 6570 1927 3 1148 29703 63 49 0 chrX 73838551 73842891 -92807405 + L1Md_A LINE L1 983 5589 -297 3 1148 8006 51 1 3 chrX 73842891 73843889 -92806407 + L1Md_F2 LINE L1 5587 6582 0 3 1148 487 223 29 96 chrX 73843904 73844466 -92805830 + SYNREP_MM Satellite Satellite 1 524 -4 3 1148 1216 221 22 62 chrX 73844487 73844913 -92805383 + L1_Rod LINE L1 5236 5623 -257 3 1148 2134 237 76 8 chrX 73844914 73845650 -92804646 + Lx7 LINE L1 5149 5919 -1777 3 1148 865 214 37 109 chrX 73845655 73845939 -92804357 + ORR1C2 LTR MaLR 1 259 -111 3 1148 192 77 0 0 chrX 73845943 73845969 -92804327 + (CCCCCT)n Simple_repeat Simple_repeat 3 28 0 3 1148 748 230 73 11 chrX 73845969 73846187 -92804109 + ORR1C2 LTR MaLR 148 381 -3 3 1148 702 323 59 24 chrX 73846248 73846673 -92803623 + Lx7 LINE L1 5974 6413 -1283 3 1148 2363 288 53 16 chrX 73846692 73847503 -92802793 + Lx7 LINE L1 6461 7301 -395 3 1148 252 295 20 31 chrX 73848988 73849086 -92801210 - PB1D10 SINE Alu 0 117 21 3 1148 604 266 132 90 chrX 73849107 73849462 -92800834 - ORR1D2 LTR MaLR 0 370 1 3 1148 232 369 31 0 chrX 73849613 73849678 -92800618 + Tigger7 DNA MER2_type 2422 2488 -3 3 1148 333 233 19 0 chrX 73851191 73851294 -92799002 - L1_Mur3 LINE L1 -4250 1630 1526 3 1148 6225 47 0 0 chrX 73851302 73852054 -92798242 - L1Md_A LINE L1 0 6582 5831 3 1148 4005 25 0 0 chrX 73852054 73852539 -92797757 + L1Md_A LINE L1 5337 5821 -62 3 1148 317 258 137 37 chrX 73852675 73852836 -92797460 - L1MDb LINE L1 -5139 1270 1094 3 1148 26 30 0 0 chrX 73852962 73852995 -92797301 + AT_rich Low_complexity Low_complexity 1 33 0 3 1148 258 105 0 0 chrX 73852995 73853033 -92797263 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 3 1148 5418 181 33 21 chrX 73853033 73854136 -92796160 - Lx4B LINE L1 -16 7042 5927 3 1148 873 161 10 46 chrX 73854137 73854333 -92795963 - L1_Mur2 LINE L1 -2211 3666 3478 3 1148 230 0 0 32 chrX 73854356 73854387 -92795909 + (TTG)n Simple_repeat Simple_repeat 2 31 0 3 1148 7189 170 20 48 chrX 73854502 73854731 -92795565 - L1_Mur2 LINE L1 -2384 3493 3274 3 1148 1551 52 11 0 chrX 73854731 73854922 -92795374 - B2_Mm1t SINE B2 0 193 1 3 1148 7189 170 20 48 chrX 73854922 73856163 -92794133 - L1_Mur2 LINE L1 -2604 3273 2055 3 1148 459 0 0 0 chrX 73856163 73856214 -92794082 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1148 387 0 0 0 chrX 73856214 73856256 -92794040 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1148 7189 170 20 48 chrX 73856256 73856492 -92793804 - L1_Mur2 LINE L1 -3823 2054 1833 3 1148 464 330 76 4 chrX 73858092 73858369 -92791927 - Lx7 LINE L1 -376 7320 7024 3 1148 891 300 58 62 chrX 73858386 73858829 -92791467 - L1_Mur3 LINE L1 -2594 3286 2839 3 1148 1353 91 0 5 chrX 73858829 73859016 -92791280 - B2_Mm2 SINE B2 -9 186 1 3 1148 891 300 58 62 chrX 73859016 73859701 -92790595 - L1_Mur3 LINE L1 -3042 2838 2162 3 1148 1879 127 18 15 chrX 73860193 73860521 -92789775 - L1_Mur1 LINE L1 -891 4995 4667 3 1148 13418 119 8 3 chrX 73860520 73863418 -92786878 - L1_Mus2 LINE L1 0 6566 3655 3 1148 7018 88 5 1 chrX 73863421 73864679 -92785617 - L1_Mus1 LINE L1 -1 6566 5304 3 1148 4580 49 0 9 chrX 73864689 73865263 -92785033 - L1Md_F2 LINE L1 -3 6579 6011 3 1148 1060 174 31 35 chrX 73867807 73868034 -92782262 + URR1A DNA MER1_type 1 226 0 3 1148 325 318 44 34 chrX 73869228 73869433 -92780863 - CYRA11_Mm Unknown Y-chromosome -239 378 172 3 1148 768 226 12 0 chrX 73869266 73869434 -92780862 + URR1A DNA MER1_type 57 226 0 3 1148 2434 107 27 75 chrX 73870126 73870539 -92779757 - RLTR9C LTR ERVK 0 393 1 3 1148 472 107 0 0 chrX 73870539 73870614 -92779682 - MMETn-int LTR ERVK -1 7405 7331 3 1148 3489 170 29 61 chrX 73870830 73872799 -92777497 - MMETn-int LTR ERVK -1801 5443 2362 3 1148 1063 115 0 76 chrX 73873133 73873330 -92776966 - RLTR13D1 LTR ERVK -156 650 469 3 1148 540 146 20 42 chrX 73873340 73873529 -92776767 - MMETn-int LTR ERVK -4000 3406 3035 3 1148 1432 147 25 43 chrX 73873526 73873577 -92776719 - MMETn-int LTR ERVK -4641 2765 2724 3 1148 1475 69 0 0 chrX 73873577 73873765 -92776531 - B2_Mm1a SINE B2 -4 189 2 3 1148 1432 147 25 43 chrX 73873765 73873990 -92776306 - MMETn-int LTR ERVK -4683 2723 2494 3 1148 3493 218 63 78 chrX 73874004 73875330 -92774966 - MMETn-int LTR ERVK -3538 1306 2 3 1148 1871 113 151 89 chrX 73875332 73875702 -92774594 - RLTR9C LTR ERVK 0 393 1 3 1148 278 239 29 29 chrX 73878087 73878156 -92772140 + ID4 SINE ID 4 72 -11 3 1148 423 0 0 0 chrX 73878362 73878409 -92771887 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1148 203 0 0 36 chrX 73878624 73878652 -92771644 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 3 1148 1016 102 0 0 chrX 73878652 73878789 -92771507 - B1_Mm SINE Alu -10 137 1 3 1148 3341 43 2 0 chrX 73878796 73879191 -92771105 - MTA_Mm LTR MaLR 0 396 1 3 1148 8806 48 6 3 chrX 73879191 73880286 -92770010 - MTA_Mm-int LTR MaLR 0 1098 1 3 1148 3368 40 2 0 chrX 73880286 73880681 -92769615 - MTA_Mm LTR MaLR 0 396 1 3 1148 21 0 0 0 chrX 73880970 73880991 -92769305 + AT_rich Low_complexity Low_complexity 1 21 0 3 1148 7731 41 7 2 chrX 73882297 73883569 -92766727 - L1Md_F3 LINE L1 0 6584 5306 3 1148 315 0 0 0 chrX 73883886 73883921 -92766375 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1148 305 24 0 23 chrX 73884118 73884161 -92766135 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 3 1148 216 67 0 0 chrX 73884618 73884648 -92765648 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1148 414 232 0 0 chrX 73885101 73885213 -92765083 + L1VL4 LINE L1 524 635 -5667 3 1148 501 208 8 8 chrX 73885206 73885337 -92764959 + Lx2 LINE L1 3709 3839 -2047 3 1148 2065 185 37 11 chrX 73885670 73886285 -92764011 + Lx2 LINE L1 4759 5240 -646 3 1148 5912 173 20 13 chrX 73886273 73887395 -92762901 + Lx2 LINE L1 5615 6753 -244 3 1148 399 56 0 0 chrX 73887395 73887449 -92762847 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1148 5912 173 20 13 chrX 73887449 73887480 -92762816 + Lx2 LINE L1 6754 6776 -221 3 1148 209 108 0 26 chrX 73887607 73887645 -92762651 + (TCTCCC)n Simple_repeat Simple_repeat 4 40 0 3 1148 276 103 105 105 chrX 73889027 73889103 -92761193 - ORR1D1 LTR MaLR 0 374 299 3 1148 787 256 6 6 chrX 73889123 73889304 -92760992 - ORR1D1 LTR MaLR -152 222 42 3 1148 1452 235 67 96 chrX 73889323 73889430 -92760866 + RLTR22_Mur LTR ERVK 1211 1311 -537 3 1148 789 66 25 0 chrX 73889430 73889551 -92760745 + (TA)n Simple_repeat Simple_repeat 1 124 0 3 1148 1452 235 67 96 chrX 73889551 73889923 -92760373 + RLTR22_Mur LTR ERVK 1312 1676 -172 3 1148 3584 184 70 11 chrX 73891466 73892204 -92758092 - Lx5 LINE L1 0 7050 6269 3 1148 4559 172 37 10 chrX 73892203 73893270 -92757026 + Lx5 LINE L1 4934 6041 -1009 3 1148 180 0 0 0 chrX 73893270 73893290 -92757006 + (TGGA)n Simple_repeat Simple_repeat 1 20 0 3 1148 3415 174 60 3 chrX 73893290 73893542 -92756754 + Lx5 LINE L1 6042 6309 -741 3 1148 858 61 0 67 chrX 73895020 73895213 -92755083 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 3 1148 180 0 0 0 chrX 73895348 73895368 -92754928 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1148 322 308 0 0 chrX 73896622 73896726 -92753570 + L1VL1 LINE L1 384 487 -5935 3 1148 1978 25 0 0 chrX 73896726 73896963 -92753333 + L1Md_F2 LINE L1 5350 5586 -297 3 1148 7959 54 3 2 chrX 73896963 73897957 -92752339 + L1Md_F2 LINE L1 5587 6581 -1 3 1148 14510 172 45 51 chrX 73897966 73899448 -92750848 + L1_Mus4 LINE L1 489 2010 -3873 3 1148 7223 36 21 8 chrX 73899448 73900343 -92749953 + L1Md_F3 LINE L1 5677 6583 -1 3 1148 14510 179 76 106 chrX 73900343 73900402 -92749894 + L1_Mus4 LINE L1 2011 2084 -3799 3 1148 273 297 33 141 chrX 73900402 73900480 -92749816 - RNLTR23 LTR ERVK 0 642 569 4 1148 2305 4 0 0 chrX 73900480 73900770 -92749526 + L1Md_A LINE L1 6322 6582 0 4 1148 273 297 33 141 chrX 73900770 73900874 -92749422 - RNLTR23 LTR ERVK -74 568 480 4 1148 14510 179 76 106 chrX 73900874 73901673 -92748623 + L1_Mus4 LINE L1 2085 3122 -2761 3 1148 2852 46 0 23 chrX 73901673 73902027 -92748269 - ORR1A1 LTR MaLR 0 346 1 4 1148 13563 66 6 1 chrX 73902027 73903809 -92746487 - ORR1A1-int LTR MaLR 0 1792 1 4 1148 2821 67 0 0 chrX 73903809 73904155 -92746141 - ORR1A1 LTR MaLR 0 346 1 4 1148 14510 179 76 106 chrX 73904155 73906343 -92743953 + L1_Mus4 LINE L1 3123 5246 -635 3 1148 478 223 39 69 chrX 73906327 73906457 -92743839 + MT2B LTR ERVL 153 278 -323 4 1148 1045 106 0 0 chrX 73906343 73906484 -92743812 + B1_Mm SINE Alu 7 147 0 4 1148 1292 83 0 14 chrX 73906486 73906849 -92743447 + (GAA)n Simple_repeat Simple_repeat 1 357 0 4 1148 14510 179 76 106 chrX 73906849 73907315 -92742981 + L1_Mus4 LINE L1 5249 5703 -180 3 1148 1513 64 0 33 chrX 73907315 73907526 -92742770 + L1_Mus1 LINE L1 6363 6566 -1 4 1148 14510 95 7 31 chrX 73907526 73908477 -92741819 + L1_Mus4 LINE L1 5704 6634 -2 3 1148 840 221 9 14 chrX 73908474 73908685 -92741611 - Lx5 LINE L1 -269 6789 6580 4 1148 1951 202 19 11 chrX 73908697 73909073 -92741223 - RMER19C LTR ERVK -2 609 231 4 1148 4895 173 74 15 chrX 73909159 73910199 -92740097 - MurERV4_19-int LTR ERVK -4486 1294 129 4 1148 2664 72 0 25 chrX 73910199 73910554 -92739742 - ORR1A0 LTR MaLR 0 346 1 4 1148 14010 57 5 1 chrX 73910554 73912339 -92737957 - ORR1A0-int LTR MaLR 0 1792 1 4 1148 2494 74 6 0 chrX 73912343 73912679 -92737617 - ORR1A0 LTR MaLR -8 338 1 4 1148 693 173 0 8 chrX 73912679 73912813 -92737483 - MurERV4_19-int LTR ERVK -5647 133 1 4 1148 2009 242 122 36 chrX 73912813 73913481 -92736815 - RMER19C LTR ERVK 0 611 12 4 1148 195 69 0 0 chrX 73913481 73913510 -92736786 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 4 1148 5534 200 48 9 chrX 73913566 73915055 -92735241 - Lx5 LINE L1 -225 6825 5283 4 1148 6340 89 1 4 chrX 73915100 73916006 -92734290 - L1_Mus1 LINE L1 -1 6566 5664 4 1148 225 0 0 0 chrX 73916610 73916635 -92733661 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 4 1148 6700 118 2 4 chrX 73916635 73917697 -92732599 - L1_Mm LINE L1 -206 5677 4618 4 1148 588 110 0 0 chrX 73917727 73917809 -92732487 - B2_Mm2 SINE B2 -112 83 2 4 1148 2585 179 9 9 chrX 73917809 73918368 -92731928 - Lx5 LINE L1 -579 5298 4740 4 1148 335 356 60 25 chrX 73918391 73918673 -92731623 - Lx8 LINE L1 -372 7101 6810 4 1148 701 185 215 11 chrX 73918673 73918859 -92731437 - URR1A DNA MER1_type -1 225 2 4 1148 282 299 65 80 chrX 73918948 73919086 -92731210 - RLTR42 LTR ERVK -40 199 64 4 1148 1009 153 38 5 chrX 73919646 73919830 -92730466 - URR1A DNA MER1_type 0 226 37 4 1148 3093 22 76 0 chrX 73920001 73920369 -92729927 - MTA_Mm LTR MaLR 0 396 1 4 1148 7532 60 52 9 chrX 73920369 73921046 -92729250 - MTA_Mm-int LTR MaLR 0 1098 376 4 1148 4740 49 2 3 chrX 73921046 73921637 -92728659 - L1Md_F3 LINE L1 -1 6583 5994 4 1148 7532 60 52 9 chrX 73921637 73922011 -92728285 - MTA_Mm-int LTR MaLR -723 375 2 4 1148 3168 27 53 0 chrX 73922011 73922387 -92727909 - MTA_Mm LTR MaLR 0 396 1 4 1148 576 42 0 0 chrX 73922594 73922665 -92727631 + (GAAAA)n Simple_repeat Simple_repeat 5 75 0 4 1149 212 298 0 0 chrX 73925018 73925065 -92725231 - ID4_ SINE ID -17 66 20 4 1149 916 210 64 15 chrX 73925084 73925287 -92725009 - B3 SINE B2 -3 213 1 4 1149 1671 215 37 17 chrX 73925677 73926080 -92724216 + Lx7 LINE L1 6836 7246 -450 4 1149 315 121 0 0 chrX 73926105 73926163 -92724133 + (T)n Simple_repeat Simple_repeat 1 58 0 4 1149 2327 227 52 74 chrX 73926920 73927338 -92722958 + Lx7 LINE L1 6950 7362 -334 4 1149 186 43 0 0 chrX 73927338 73927361 -92722935 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 1149 2327 227 52 74 chrX 73927361 73927699 -92722597 + Lx7 LINE L1 7363 7689 -7 4 1149 6681 83 23 21 chrX 73927702 73928876 -92721420 - L1_Mus2 LINE L1 0 6566 5398 4 1149 677 250 94 18 chrX 73928882 73929106 -92721190 - L1_Rod LINE L1 -94 5753 5513 4 1149 1241 207 110 70 chrX 73929100 73929629 -92720667 + Lx9 LINE L1 7069 7618 -26 4 1149 594 103 0 0 chrX 73929837 73929924 -92720372 + (GGAA)n Simple_repeat Simple_repeat 3 89 0 4 1149 1005 81 0 7 chrX 73929953 73930080 -92720216 + B1_Mus1 SINE Alu 11 137 -11 4 1149 662 55 0 11 chrX 73930080 73930172 -92720124 + (GAAA)n Simple_repeat Simple_repeat 2 92 0 4 1149 434 328 64 0 chrX 73930305 73930430 -92719866 - RSINE1 SINE B4 -30 135 3 4 1149 360 119 0 0 chrX 73930957 73931016 -92719280 + (TCCC)n Simple_repeat Simple_repeat 3 61 0 4 1149 431 296 11 6 chrX 73931335 73931512 -92718784 + (CAT)n Simple_repeat Simple_repeat 3 180 0 4 1149 341 236 15 130 chrX 73931535 73931735 -92718561 + HAL1-2a_MD LINE L1 2346 2522 -502 4 1149 284 276 0 13 chrX 73931735 73931812 -92718484 + (CAT)n Simple_repeat Simple_repeat 2 77 0 4 1149 374 188 29 14 chrX 73932049 73932119 -92718177 - RLTR13D6 LTR ERVK 0 803 733 4 1149 3040 169 46 19 chrX 73932106 73932863 -92717433 - RLTR13D6 LTR ERVK -218 805 1 4 1149 834 32 16 31 chrX 73933126 73933254 -92717042 + L1Md_F3 LINE L1 6457 6582 -2 4 1149 559 340 66 19 chrX 73933546 73933804 -92716492 - B4A SINE B4 -16 276 7 4 1149 302 292 43 61 chrX 73934151 73934315 -92715981 - L1MC5 LINE L1 -894 7067 6907 4 1149 219 36 0 0 chrX 73934434 73934462 -92715834 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 4 1149 564 322 39 5 chrX 73934550 73934753 -92715543 - MTE2b LTR MaLR -14 365 156 4 1149 664 42 24 71 chrX 73934764 73934891 -92715405 - L1_Mus3 LINE L1 -2 6636 6516 4 1149 1002 93 26 0 chrX 73934893 73935044 -92715252 + L1_Mus3 LINE L1 5845 5999 -637 4 1149 221 91 45 0 chrX 73935059 73935103 -92715193 + (TTTTG)n Simple_repeat Simple_repeat 4 49 0 4 1149 1157 48 14 0 chrX 73935103 73935249 -92715047 - B1_Mus1 SINE Alu 0 148 1 4 1149 3413 82 48 0 chrX 73935251 73935751 -92714545 + L1_Mus3 LINE L1 5984 6507 -131 4 1149 318 207 17 0 chrX 73935916 73935974 -92714322 + MLT1A1 LTR MaLR 56 114 -294 4 1149 339 25 0 0 chrX 73936088 73936128 -92714168 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 1149 582 86 0 0 chrX 73936211 73936292 -92714004 + (TTTTC)n Simple_repeat Simple_repeat 4 84 0 4 1149 222 116 0 0 chrX 73936292 73936335 -92713961 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 4 1149 2701 134 25 2 chrX 73936363 73936798 -92713498 - Lx LINE L1 -7 6647 6203 4 1149 21 71 0 0 chrX 73937925 73937967 -92712329 + AT_rich Low_complexity Low_complexity 1 42 0 4 1149 325 297 59 0 chrX 73938241 73938359 -92711937 + MTC LTR MaLR 1 125 -296 4 1149 312 330 42 16 chrX 73941909 73942100 -92708196 + L1MB4 LINE L1 5947 6142 -38 4 1149 360 0 0 0 chrX 73942102 73942142 -92708154 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1149 787 323 21 7 chrX 73942302 73942586 -92707710 + B4A SINE B4 5 292 0 4 1149 790 293 66 55 chrX 73944422 73944678 -92705618 - B4 SINE B4 -10 282 24 4 1149 382 225 12 36 chrX 73945800 73945883 -92704413 - B4 SINE B4 -209 83 3 4 1149 1472 176 50 18 chrX 73946420 73946697 -92703599 - MTC LTR MaLR -8 413 128 4 1149 315 0 0 0 chrX 73946697 73946732 -92703564 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1149 36287 30 0 0 chrX 73946773 73952860 -92697436 - L1Md_T LINE L1 0 6585 402 4 1149 583 216 108 14 chrX 73952860 73953041 -92697255 - MTC LTR MaLR -227 192 2 4 1149 610 250 89 89 chrX 73953190 73953370 -92696926 + B3A SINE B2 4 183 -12 4 1149 4553 118 33 11 chrX 73954152 73954877 -92695419 - Lx LINE L1 -3 6651 5911 4 1149 530 64 0 2 chrX 73954878 73954960 -92695336 + Lx LINE L1 5847 5927 -639 4 1149 1152 320 50 57 chrX 73955351 73955522 -92694774 + MT2A LTR ERVL 1 156 -377 4 1149 4015 65 2 2 chrX 73955522 73956029 -92694267 + L1Md_F2 LINE L1 6076 6582 0 4 1149 1152 284 76 44 chrX 73956029 73956368 -92693928 + MT2A LTR ERVL 157 554 0 4 1149 27 29 0 0 chrX 73956652 73956686 -92693610 + AT_rich Low_complexity Low_complexity 1 34 0 4 1149 381 43 0 0 chrX 73956922 73956969 -92693327 + (TTTA)n Simple_repeat Simple_repeat 1 47 0 4 1149 5435 206 39 24 chrX 73956969 73958212 -92692084 - Lx5 LINE L1 -20 7030 5765 4 1149 1783 141 76 20 chrX 73958220 73958574 -92691722 + L1_Mur2 LINE L1 4588 4961 -916 4 1149 558 146 29 0 chrX 73958575 73958678 -92691618 + URR1B DNA MER1_type 113 218 -7 4 1149 328 301 12 29 chrX 73958961 73959228 -92691068 + CT-rich Low_complexity Low_complexity 1 262 0 4 1149 291 28 0 0 chrX 73959757 73959793 -92690503 + (GCTTG)n Simple_repeat Simple_repeat 3 38 0 4 1149 301 284 0 0 chrX 73959793 73959867 -92690429 - ID4 SINE ID -7 76 3 4 1149 390 21 0 0 chrX 73959895 73959942 -92690354 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 1149 229 351 13 63 chrX 73959989 73960068 -92690228 - RSINE1 SINE B4 -17 148 74 4 1149 3580 100 98 2 chrX 73960160 73960683 -92689613 + L1_Mus3 LINE L1 6054 6626 -12 4 1149 220 220 16 25 chrX 73960707 73960828 -92689468 + CT-rich Low_complexity Low_complexity 3 122 0 4 1149 22 0 0 0 chrX 73962159 73962181 -92688115 + AT_rich Low_complexity Low_complexity 1 22 0 4 1149 343 280 82 27 chrX 73962202 73962349 -92687947 - RSINE1 SINE B4 -7 158 4 4 1149 557 226 8 0 chrX 73962572 73962705 -92687591 - Lx7 LINE L1 0 7696 7563 4 1149 10315 157 13 25 chrX 73962705 73964761 -92685535 - L1_Mur2 LINE L1 -888 4989 2959 4 1149 2068 151 130 47 chrX 73964761 73965184 -92685112 - RMER13B LTR ERVK -301 607 150 4 1149 714 311 114 35 chrX 73965183 73965541 -92684755 + MLT1D LTR MaLR 164 650 -3 4 1149 244 250 25 107 chrX 73965635 73965756 -92684540 + MER2 DNA MER2_type 74 184 -161 4 1149 10433 114 13 10 chrX 73965763 73968373 -92681923 + L1VL1 LINE L1 344 2936 -2947 4 1149 30257 88 6 3 chrX 73968377 73973582 -92676714 - L1Md_F2 LINE L1 -12 6570 1346 4 1149 12113 103 1 6 chrX 73973600 73975519 -92674777 - L1Md_F2 LINE L1 -13 6569 4663 4 1149 1496 37 5 41 chrX 73975519 73975714 -92674582 - B2_Mm1t SINE B2 -5 188 1 4 1149 12113 104 1 5 chrX 73975714 73976335 -92673961 - L1Md_F2 LINE L1 -1221 4662 4043 4 1149 2570 96 0 0 chrX 73976336 73976722 -92673574 + L1VL1 LINE L1 3655 4040 -1843 4 1149 3804 151 38 28 chrX 73976734 73977552 -92672744 - L1Md_F LINE L1 -5313 1247 414 4 1149 6884 142 1 66 chrX 73977552 73978913 -92671383 + L1_Mus1 LINE L1 2925 4202 -1681 4 1149 2739 102 5 8 chrX 73978913 73979309 -92670987 + MTA_Mm LTR MaLR 1 395 -1 4 1149 6784 107 21 69 chrX 73979310 73980464 -92669832 + MTA_Mm-int LTR MaLR 1 1098 0 4 1149 2875 73 28 8 chrX 73980464 73980852 -92669444 + MTA_Mm LTR MaLR 1 396 0 4 1149 6884 142 1 66 chrX 73980852 73980887 -92669409 + L1_Mus1 LINE L1 4203 4231 -1652 4 1149 7130 76 12 0 chrX 73980889 73981990 -92668306 + L1_Mus1 LINE L1 5455 6567 0 4 1149 1219 211 60 15 chrX 73982003 73982272 -92668024 - RLTR22_Mur LTR ERVK -1567 281 1 4 1149 228 311 22 22 chrX 73982529 73982621 -92667675 + Cheshire DNA MER1_type 167 258 -2162 4 1149 1201 66 0 57 chrX 73983436 73983613 -92666683 - L1Md_F2 LINE L1 -216 6366 6200 5 1149 1098 107 62 0 chrX 73983613 73983791 -92666505 + L1Md_F2 LINE L1 6394 6582 0 5 1149 203 250 0 0 chrX 73983899 73983947 -92666349 + GA-rich Low_complexity Low_complexity 4 51 0 5 1149 225 0 0 0 chrX 73984397 73984422 -92665874 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 5 1149 13932 59 0 0 chrX 73984426 73987003 -92663293 - L1Md_F2 LINE L1 -14 6568 3992 5 1149 25 0 0 0 chrX 73987283 73987308 -92662988 + AT_rich Low_complexity Low_complexity 1 25 0 5 1149 18172 139 47 1 chrX 73987384 73991666 -92658630 - L1Md_F2 LINE L1 0 6582 2092 5 1149 28 29 0 0 chrX 73992230 73992265 -92658031 + AT_rich Low_complexity Low_complexity 1 35 0 5 1149 282 95 0 0 chrX 73992284 73992326 -92657970 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1149 448 244 0 0 chrX 73992375 73992461 -92657835 - B3A SINE B2 -108 90 5 5 1149 2050 98 0 13 chrX 73993297 73993598 -92656698 - L1Md_F2 LINE L1 -13 6569 6273 5 1149 2660 60 0 0 chrX 73993598 73993947 -92656349 + L1_Mm LINE L1 5441 5789 -94 5 1149 278 342 0 0 chrX 73994383 73994459 -92655837 + ID4_ SINE ID 8 83 0 5 1149 3353 36 2 0 chrX 73994948 73995341 -92654955 + MTA_Mm LTR MaLR 1 394 -2 5 1149 8106 69 10 5 chrX 73995343 73996433 -92653863 + MTA_Mm-int LTR MaLR 1 1096 -2 5 1149 3208 51 5 0 chrX 73996437 73996829 -92653467 + MTA_Mm LTR MaLR 3 396 0 5 1149 394 241 111 0 chrX 73997215 73997323 -92652973 + RMER30 DNA MER1_type 46 165 -37 5 1149 207 0 0 0 chrX 73997525 73997548 -92652748 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1149 1590 278 14 31 chrX 73997576 73997999 -92652297 - MTD LTR MaLR -2 417 2 5 1149 25 31 0 0 chrX 73998351 73998383 -92651913 + AT_rich Low_complexity Low_complexity 1 32 0 5 1149 947 246 76 92 chrX 73998452 73998833 -92651463 - MTEa LTR MaLR 0 379 5 5 1149 1445 181 3 0 chrX 73999705 73999998 -92650298 + L1_Mur1 LINE L1 1720 2013 -3873 5 1149 753 186 25 10 chrX 74000009 74000205 -92650091 + L1_Mur1 LINE L1 2025 2223 -3663 1 1149 3840 134 32 16 chrX 74000204 74001243 -92649053 + L1VL2 LINE L1 271 1319 -2296 2 1149 8238 112 9 4 chrX 74001240 74003372 -92646924 + L1_Mus3 LINE L1 4497 6638 0 3 1149 10237 158 24 93 chrX 74003370 74005983 -92644313 + L1_Mur1 LINE L1 2208 4640 -1246 1 1149 36407 13 1 7 chrX 74005986 74011397 -92638899 + L1Md_A LINE L1 214 5586 -297 4 1149 8893 11 0 0 chrX 74011397 74012392 -92637904 + L1Md_A LINE L1 5587 6581 -1 4 1149 201 74 0 0 chrX 74012400 74012427 -92637869 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1149 2886 171 97 38 chrX 74012429 74013123 -92637173 + L1_Mur1 LINE L1 4637 5371 -515 1 1149 2816 163 92 6 chrX 74013151 74013695 -92636601 + L1VL2 LINE L1 132 722 -5613 6 1149 276 73 0 0 chrX 74013692 74013733 -92636563 + MusHAL1 LINE L1 1079 1119 -1593 7 1149 746 143 13 33 chrX 74013734 74013886 -92636410 + L1VL2 LINE L1 157 305 -6030 8 1149 2955 174 2 33 chrX 74013884 74014519 -92635777 + L1_Mm LINE L1 4566 5180 -703 9 1149 13946 158 76 56 chrX 74014520 74015943 -92634353 + L1VL1 LINE L1 59 1516 -2182 1 1149 3061 45 0 0 chrX 74015943 74016297 -92633999 - IAPEY2_LTR LTR ERVK -3 354 1 1 1149 13946 112 22 8 chrX 74016297 74018186 -92632110 + L1VL1 LINE L1 1517 3417 -281 1 1149 824 199 0 0 chrX 74018186 74018342 -92631954 + L1M2 LINE L1 3655 3810 -2333 1 1149 21738 142 21 10 chrX 74018342 74019513 -92630783 - Lx LINE L1 -398 6256 5089 1 1149 1796 107 7 11 chrX 74019513 74019797 -92630499 - L1_Mus3 LINE L1 -1 6637 6355 1 1149 21738 177 17 21 chrX 74019797 74020371 -92629925 - Lx LINE L1 -795 5088 4516 1 1149 345 47 0 0 chrX 74020371 74020414 -92629882 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 1149 1095 50 0 41 chrX 74020414 74020559 -92629737 - B1_Mus1 SINE Alu -9 139 1 1 1149 21738 177 17 21 chrX 74020559 74023045 -92627251 - Lx LINE L1 -1368 4515 2029 1 1149 248 28 56 0 chrX 74023045 74023081 -92627215 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1 1149 21738 140 15 12 chrX 74023081 74024327 -92625969 - Lx LINE L1 -3855 2028 778 1 1149 564 15 0 0 chrX 74025195 74025260 -92625036 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 1149 366 136 0 0 chrX 74025270 74025351 -92624945 + (GA)n Simple_repeat Simple_repeat 1 81 0 1 1149 511 338 104 31 chrX 74025752 74026109 -92624187 - MLT1C LTR MaLR -3 464 82 2 1149 674 289 57 5 chrX 74026201 74026413 -92623883 + MTD LTR MaLR 197 419 0 2 1149 192 158 0 0 chrX 74026785 74026823 -92623473 + A-rich Low_complexity Low_complexity 1 38 0 2 1149 259 304 68 51 chrX 74027277 74027395 -92622901 - MLT1E3 LTR MaLR -13 611 492 2 1149 297 0 0 0 chrX 74027395 74027428 -92622868 + (T)n Simple_repeat Simple_repeat 1 33 0 2 1149 252 300 47 62 chrX 74027632 74027760 -92622536 - MLT1C LTR MaLR -527 126 1 2 1149 2352 236 77 117 chrX 74027970 74028923 -92621373 + RMER17B LTR ERVK 1 915 -43 2 1149 638 303 95 4 chrX 74028983 74029008 -92621288 + MLT1A0 LTR MaLR 113 137 -228 2 1149 481 87 11 21 chrX 74029008 74029102 -92621194 - L1_Mus4 LINE L1 0 6636 6544 2 1149 638 303 95 4 chrX 74029102 74029308 -92620988 + MLT1A0 LTR MaLR 138 364 -1 2 1149 3148 70 0 2 chrX 74029917 74030319 -92619977 - L1_Mus1 LINE L1 0 6567 6167 2 1149 24 32 0 0 chrX 74030458 74030489 -92619807 + AT_rich Low_complexity Low_complexity 1 31 0 2 1149 4983 98 32 12 chrX 74030527 74031272 -92619024 - Lx3_Mus LINE L1 0 7009 6250 3 1149 197 33 33 0 chrX 74031282 74031312 -92618984 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3 1149 7080 173 43 11 chrX 74031317 74032656 -92617640 - Lx5 LINE L1 -16 7034 5654 3 1149 21 0 0 0 chrX 74032801 74032822 -92617474 + AT_rich Low_complexity Low_complexity 1 21 0 3 1149 1097 264 137 19 chrX 74032861 74033182 -92617114 - ORR1E LTR MaLR 0 359 1 3 1149 1479 239 83 1 chrX 74033370 74033719 -92616577 + MTEa LTR MaLR 1 358 -21 3 1149 448 241 12 0 chrX 74033779 74033862 -92616434 - 5S rRNA rRNA -31 90 7 3 1149 296 335 116 12 chrX 74033989 74034161 -92616135 - MLT1H-int LTR MaLR -902 507 318 3 1149 405 58 0 0 chrX 74035316 74035368 -92614928 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1149 616 304 118 10 chrX 74035518 74035721 -92614575 + B4A SINE B4 1 225 -67 3 1149 517 293 12 44 chrX 74035727 74035891 -92614405 + B3 SINE B2 1 169 -29 4 1149 468 0 0 0 chrX 74035899 74035951 -92614345 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1149 567 240 0 0 chrX 74036629 74036733 -92613563 - B1_Mur1 SINE Alu -5 144 41 4 1149 2406 55 0 30 chrX 74037130 74037419 -92612877 + L1Md_F2 LINE L1 5241 5527 -356 4 1149 4063 56 0 0 chrX 74037419 74037923 -92612373 - L1Md_F2 LINE L1 0 6582 6079 4 1149 2406 55 0 30 chrX 74037923 74037971 -92612325 + L1Md_F2 LINE L1 5528 5568 -315 4 1149 7658 73 1 0 chrX 74037973 74038964 -92611332 + L1Md_F2 LINE L1 5587 6578 -4 4 1149 286 282 14 0 chrX 74039268 74039339 -92610957 - ID4 SINE ID -11 72 1 4 1149 245 298 52 21 chrX 74039449 74039545 -92610751 - MTEb LTR MaLR -2 377 279 4 1149 347 319 0 0 chrX 74039813 74039907 -92610389 + (ATG)n Simple_repeat Simple_repeat 3 96 0 4 1149 240 247 71 68 chrX 74041170 74041310 -92608986 - MER5A1 DNA MER1_type -26 163 2 4 1149 4732 22 0 0 chrX 74041676 74042217 -92608079 - L1Md_F3 LINE L1 -14 6570 6030 4 1149 445 200 47 19 chrX 74042352 74042459 -92607837 - Lx8 LINE L1 -375 7098 6989 5 1149 1006 300 29 26 chrX 74043070 74043416 -92606880 + MLT1A0 LTR MaLR 1 347 -18 5 1149 792 243 106 16 chrX 74043556 74043811 -92606485 - RMER15 LTR ERVL 0 575 298 5 1149 396 0 0 0 chrX 74044367 74044411 -92605885 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1149 4406 12 2 0 chrX 74044553 74045045 -92605251 - MT2_Mm LTR ERVL 0 493 1 5 1149 570 281 17 11 chrX 74045051 74045231 -92605065 + Lx6 LINE L1 7280 7460 0 5 1149 429 352 66 37 chrX 74045486 74045728 -92604568 + MLT1A1 LTR MaLR 155 403 -5 5 1149 207 0 0 0 chrX 74046037 74046060 -92604236 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1149 230 342 28 124 chrX 74046241 74046458 -92603838 + MER67D LTR ERV1 286 481 -33 5 1149 332 318 104 38 chrX 74046670 74046979 -92603317 + Lx9 LINE L1 7154 7472 -1 5 1149 4693 73 19 2 chrX 74047020 74047640 -92602656 + L1_Mus2 LINE L1 5935 6565 -1 6 1149 374 214 44 11 chrX 74047864 74047954 -92602342 - RMER5 LTR ERV1 -144 390 298 6 1149 799 106 65 26 chrX 74047954 74048109 -92602187 + RMER5 LTR ERV1 365 525 -9 6 1149 793 247 49 94 chrX 74048140 74048196 -92602100 - RMER5 LTR ERV1 -240 294 240 6 1149 545 42 14 0 chrX 74048196 74048268 -92602028 + (GAA)n Simple_repeat Simple_repeat 2 74 0 6 1149 793 247 49 94 chrX 74048268 74048519 -92601777 - RMER5 LTR ERV1 -295 239 1 6 1149 407 288 18 9 chrX 74049577 74049689 -92600607 + B4A SINE B4 1 113 -179 6 1149 3700 193 67 8 chrX 74049691 74050543 -92599753 + Lx9 LINE L1 6742 7643 -1 6 1149 384 292 169 7 chrX 74050565 74050713 -92599583 + B4A SINE B4 83 254 -38 6 1149 261 57 0 0 chrX 74050749 74050784 -92599512 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1149 441 0 0 0 chrX 74050785 74050834 -92599462 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 1149 213 263 46 23 chrX 74051092 74051195 -92599101 + MIRb SINE MIR 92 201 -61 6 1149 407 349 20 14 chrX 74051433 74051581 -92598715 + ORR1E LTR MaLR 1 149 -210 6 1149 4948 242 24 15 chrX 74052040 74053309 -92596987 - Lx7 LINE L1 -284 7412 6133 7 1149 1484 193 18 9 chrX 74053305 74053645 -92596651 - L1_Mur3 LINE L1 -496 5384 5042 7 1149 3183 89 22 0 chrX 74053664 74054125 -92596171 - L1_Mus1 LINE L1 -148 6419 5949 7 1149 4822 57 0 0 chrX 74054126 74054757 -92595539 + L1Md_F2 LINE L1 4938 5568 -315 7 143 8095 42 4 1 chrX 74054759 74055748 -92594548 + L1Md_F2 LINE L1 5587 6578 -4 7 1150 27510 111 11 11 chrX 74055748 74058332 -92591964 - L1_Mus1 LINE L1 -632 5934 3343 7 1150 2315 78 85 0 chrX 74058332 74058651 -92591645 - ORR1A1 LTR MaLR 0 346 1 7 1150 27510 124 13 12 chrX 74058651 74059529 -92590767 - L1_Mus1 LINE L1 -2541 3342 2465 7 1150 279 0 0 0 chrX 74059529 74059560 -92590736 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1150 879 105 83 0 chrX 74059560 74059693 -92590603 - B1_Mus2 SINE Alu -3 144 1 7 1150 27510 146 12 38 chrX 74059693 74061533 -92588763 - L1_Mus1 LINE L1 -3419 2464 686 7 1150 610 249 26 40 chrX 74061534 74061775 -92588521 - L1_Mus1 LINE L1 -5777 839 671 7 1150 251 289 112 10 chrX 74062881 74062979 -92587317 - Tigger5 DNA MER2_type -2270 136 29 7 1150 735 250 48 21 chrX 74062980 74063168 -92587128 + B3A SINE B2 6 198 0 7 1150 364 275 0 0 chrX 74063941 74064021 -92586275 - B4A SINE B4 -211 81 2 7 1150 421 310 40 0 chrX 74064141 74064241 -92586055 + PB1D10 SINE Alu 6 109 -8 8 1150 702 306 27 54 chrX 74064725 74065019 -92585277 - B4A SINE B4 -6 286 1 8 1150 180 111 0 0 chrX 74065220 74065247 -92585049 + (GA)n Simple_repeat Simple_repeat 2 28 0 8 1150 749 284 130 143 chrX 74065681 74065797 -92584499 + MTE2b LTR MaLR 1 120 -259 8 1150 360 31 45 30 chrX 74065797 74065863 -92584433 + (TAAA)n Simple_repeat Simple_repeat 1 67 0 8 1150 749 284 130 143 chrX 74065863 74066124 -92584172 + MTE2b LTR MaLR 121 373 -6 8 1150 398 329 159 42 chrX 74066129 74066418 -92583878 + MLT1C LTR MaLR 145 467 0 8 1150 949 324 43 21 chrX 74066601 74066625 -92583671 - B4A SINE B4 0 292 269 8 1150 315 0 0 0 chrX 74066625 74066660 -92583636 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 1150 949 324 43 21 chrX 74066660 74066916 -92583380 - B4A SINE B4 -24 268 6 8 1150 2019 101 6 34 chrX 74067099 74067427 -92582869 + Lx3A LINE L1 6540 6858 -123 8 1150 1880 271 52 20 chrX 74067422 74067782 -92582514 + Lx5 LINE L1 6456 6886 -574 8 1150 926 18 9 0 chrX 74067782 74067894 -92582402 + (TATATG)n Simple_repeat Simple_repeat 5 117 0 9 1150 1880 269 54 23 chrX 74067894 74068186 -92582110 + Lx5 LINE L1 6735 7032 -18 8 1150 1312 226 55 44 chrX 74068204 74068638 -92581658 + L1_Rod LINE L1 2229 2667 -3180 9 1150 1000 221 98 0 chrX 74068634 74068888 -92581408 - L1_Mur2 LINE L1 -216 5661 5383 9 1150 7384 163 50 2 chrX 74068879 74070339 -92579957 - L1_Mur2 LINE L1 -957 4920 3391 9 1150 207 162 0 0 chrX 74070556 74070593 -92579703 + A-rich Low_complexity Low_complexity 1 37 0 9 1150 2268 148 8 0 chrX 74070807 74071206 -92579090 - L1_Mm LINE L1 -1038 4845 4444 9 1150 19200 65 1 8 chrX 74071234 74074630 -92575666 - L1Md_F2 LINE L1 -1 6581 3213 9 1150 295 274 41 0 chrX 74075278 74075351 -92574945 + B4 SINE B4 2 77 -215 9 1150 2560 253 66 73 chrX 74075885 74076706 -92573590 + RMER1B Other Other 45 864 -202 9 1150 1040 110 7 0 chrX 74076706 74076852 -92573444 + B1_Mus2 SINE Alu 1 147 0 9 1150 2560 253 66 73 chrX 74076852 74077051 -92573245 + RMER1B Other Other 865 1056 -10 9 1150 414 296 0 100 chrX 74077052 74077172 -92573124 + B4 SINE B4 82 189 -103 9 1150 207 69 0 0 chrX 74077174 74077203 -92573093 + (CA)n Simple_repeat Simple_repeat 2 30 0 9 1150 180 306 162 0 chrX 74077252 74077363 -92572933 + MIRm SINE MIR 58 186 -90 1 1150 436 260 19 7 chrX 74077747 74077868 -92572428 + MLT1H2 LTR MaLR 367 474 -15 1 1150 470 262 103 17 chrX 74078060 74078235 -92572061 - Lx6 LINE L1 0 7460 7271 1 1150 925 252 28 32 chrX 74078238 74078521 -92571775 + Lx6 LINE L1 5769 6050 -1410 1 1150 393 197 28 0 chrX 74079291 74079362 -92570934 + B4 SINE B4 2 74 -218 1 1150 36314 30 0 0 chrX 74079404 74086029 -92564267 - L1Md_T LINE L1 0 6585 1 1 1150 11311 112 15 5 chrX 74086027 74088559 -92561737 - L1Md_F LINE L1 -2872 3011 455 1 1150 2363 187 80 32 chrX 74088559 74089084 -92561212 - RMER4B LTR ERVK -19 566 17 1 1150 851 276 0 6 chrX 74089125 74089307 -92560989 - B3 SINE B2 -34 182 2 1 1150 499 367 15 37 chrX 74089307 74089474 -92560822 - B4A SINE B4 -63 229 70 1 1150 420 20 0 0 chrX 74089528 74089577 -92560719 + (TTA)n Simple_repeat Simple_repeat 3 51 0 1 1150 468 0 0 0 chrX 74090766 74090818 -92559478 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 1150 471 35 0 0 chrX 74090942 74090999 -92559297 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 1150 391 107 27 0 chrX 74090999 74091074 -92559222 + (GA)n Simple_repeat Simple_repeat 2 78 0 1 1150 747 178 11 6 chrX 74091076 74091251 -92559045 + GA-rich Low_complexity Low_complexity 1 176 0 1 1150 386 368 16 23 chrX 74091253 74091381 -92558915 - RSINE1 SINE B4 -19 146 20 1 1150 392 21 0 0 chrX 74091383 74091430 -92558866 - ORR1A2 LTR MaLR -8 318 272 1 1150 32602 83 11 6 chrX 74091430 74097766 -92552530 - L1Md_F3 LINE L1 -3 6581 214 1 1150 1893 103 13 66 chrX 74097766 74098067 -92552229 - ORR1A2 LTR MaLR -42 285 1 1 1150 4425 163 20 59 chrX 74098103 74099053 -92551243 + L1Md_F2 LINE L1 174 1148 -5576 1 1150 1191 50 0 0 chrX 74099053 74099194 -92551102 + B1_Mm SINE Alu 1 141 -6 1 1150 186 43 0 0 chrX 74099197 74099220 -92551076 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1150 677 12 12 0 chrX 74099220 74099301 -92550995 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 1 1150 4425 163 20 59 chrX 74099301 74099509 -92550787 + L1Md_F2 LINE L1 1124 1303 -5421 1 1150 2020 109 9 0 chrX 74099506 74099828 -92550468 + L1Md_F2 LINE L1 2640 2964 -2919 1 1150 9290 57 3 0 chrX 74099838 74101786 -92548510 - L1Md_F3 LINE L1 0 6584 4630 1 1150 17473 90 11 2 chrX 74101785 74104397 -92545899 + L1Md_F2 LINE L1 2950 5585 -298 1 1150 7363 85 3 2 chrX 74104398 74105392 -92544904 + L1Md_F2 LINE L1 5587 6581 -1 1 1150 759 241 86 15 chrX 74105444 74105642 -92544654 - B3 SINE B2 -4 212 1 1 1150 424 254 140 30 chrX 74106032 74106296 -92544000 - L1MA8 LINE L1 -53 6238 5946 1 1150 718 174 226 11 chrX 74106358 74106544 -92543752 + URR1A DNA MER1_type 1 226 0 1 1150 311 342 109 46 chrX 74106646 74106885 -92543411 - ORR1E LTR MaLR -105 254 1 1 1150 755 323 0 0 chrX 74107813 74107974 -92542322 + B3A SINE B2 2 162 -36 1 1150 1151 214 5 0 chrX 74108144 74108368 -92541928 + URR1B DNA MER1_type 1 225 0 1 1150 1999 138 6 58 chrX 74108441 74108786 -92541510 + ORR1A4 LTR MaLR 1 327 -2 1 1150 834 238 86 5 chrX 74108872 74109058 -92541238 + B3 SINE B2 1 201 -15 1 1150 22 35 0 0 chrX 74109063 74109092 -92541204 + AT_rich Low_complexity Low_complexity 1 29 0 1 1150 695 302 77 33 chrX 74109654 74109928 -92540368 - B4 SINE B4 -4 288 3 1 1150 3157 122 89 0 chrX 74110227 74110734 -92539562 + Lx LINE L1 6096 6647 -7 1 1150 22 35 0 0 chrX 74110777 74110806 -92539490 + AT_rich Low_complexity Low_complexity 1 29 0 1 1150 312 327 46 28 chrX 74110967 74111184 -92539112 + L1MD1 LINE L1 5711 5931 -311 1 1150 2042 245 115 28 chrX 74111649 74112325 -92537971 - RMER19A LTR ERVK 0 737 3 1 1150 437 149 92 0 chrX 74112779 74112866 -92537430 + Lx9 LINE L1 6306 6400 -1244 1 1150 21 0 0 0 chrX 74113438 74113459 -92536837 + AT_rich Low_complexity Low_complexity 1 21 0 1 1150 207 0 0 0 chrX 74113462 74113485 -92536811 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1150 5085 205 63 14 chrX 74113509 74114684 -92535612 + Lx9 LINE L1 6402 7633 -11 1 1150 522 0 0 0 chrX 74115081 74115139 -92535157 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1150 305 197 106 0 chrX 74115167 74115233 -92535063 + B4 SINE B4 1 73 -219 1 1150 1208 205 82 13 chrX 74115233 74115549 -92534747 + Lx9 LINE L1 7288 7625 -19 1 1150 273 314 184 7 chrX 74115574 74115715 -92534581 + B4A SINE B4 103 268 -24 1 1150 528 16 0 0 chrX 74116038 74116099 -92534197 + (ATG)n Simple_repeat Simple_repeat 1 61 0 1 1150 409 214 22 0 chrX 74116330 74116419 -92533877 + MLT1A0 LTR MaLR 1 91 -274 1 1150 427 286 152 34 chrX 74116422 74116599 -92533697 + B4 SINE B4 25 222 -70 1 1150 12480 101 1 10 chrX 74117029 74118943 -92531353 - L1_Mm LINE L1 -10 5873 3979 1 1150 2141 116 11 0 chrX 74118943 74119304 -92530992 - L1Md_F LINE L1 -543 3274 2910 1 1150 2254 156 3 83 chrX 74119298 74120255 -92530041 - L1Md_F LINE L1 -2325 1492 628 1 1150 411 279 43 7 chrX 74120257 74120398 -92529898 - L1Md_F LINE L1 -5807 712 567 1 1150 309 290 45 90 chrX 74120511 74120689 -92529607 - L1VL1 LINE L1 -6016 406 237 1 1150 518 318 110 3 chrX 74121072 74121372 -92528924 - Lx8 LINE L1 -351 7122 6791 1 1150 324 0 0 0 chrX 74122206 74122242 -92528054 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1150 483 18 0 0 chrX 74122242 74122297 -92527999 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 1150 252 0 0 0 chrX 74122302 74122330 -92527966 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 1150 252 0 0 0 chrX 74122330 74122357 -92527939 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1150 333 281 22 0 chrX 74122384 74122470 -92527826 + ID SINE ID 1 88 -136 1 1150 313 304 102 73 chrX 74122470 74122676 -92527620 + RMER10A LTR ERVL 1 212 -230 1 1150 618 178 227 11 chrX 74122682 74122858 -92527438 - RMER10A LTR ERVL -227 215 2 1 1150 262 254 115 77 chrX 74122895 74123078 -92527218 + RMER10A LTR ERVL 253 442 0 1 1150 317 313 47 107 chrX 74123030 74123076 -92527220 + B1_Mur1 SINE Alu 2 142 -7 1 1150 527 226 0 19 chrX 74123076 74123180 -92527116 + ID_B1 SINE B4 116 217 -7 1 1150 195 219 0 0 chrX 74124122 74124154 -92526142 - L2 LINE L2 -3324 95 64 1 1150 1062 294 44 4 chrX 74124939 74125212 -92525084 + B4A SINE B4 7 290 -2 1 1150 465 170 27 0 chrX 74125247 74125359 -92524937 + GA-rich Low_complexity Low_complexity 2 116 0 1 1150 221 346 26 0 chrX 74126001 74126079 -92524217 - ID4_ SINE ID -2 81 2 1 1150 186 280 0 0 chrX 74126532 74126607 -92523689 + CT-rich Low_complexity Low_complexity 3 77 0 1 1150 300 317 0 82 chrX 74126652 74126762 -92523534 - PB1D10 SINE Alu -6 111 11 1 1150 399 41 0 0 chrX 74127685 74127734 -92522562 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1150 240 111 0 0 chrX 74127811 74127847 -92522449 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1150 1182 48 7 0 chrX 74127847 74127993 -92522303 - B1_Mm SINE Alu 0 147 1 1 1150 584 272 123 20 chrX 74127994 74128189 -92522107 - B4A SINE B4 -66 226 12 1 1150 240 293 0 24 chrX 74128371 74128455 -92521841 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 1 1150 293 346 142 53 chrX 74129505 74129752 -92520544 + MLT1C LTR MaLR 59 327 -140 1 1150 305 102 17 0 chrX 74129758 74129817 -92520479 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 1 1150 644 311 46 42 chrX 74130148 74130407 -92519889 - MER2 DNA MER2_type 0 345 86 1 1150 471 260 31 16 chrX 74131853 74131982 -92518314 - ID_B1 SINE B4 0 224 94 1 1150 317 305 49 84 chrX 74131858 74132001 -92518295 - B1F SINE Alu -5 144 7 1 1150 189 107 0 0 chrX 74132078 74132106 -92518190 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1150 28612 87 4 1 chrX 74133317 74138366 -92511930 - L1Md_F LINE L1 -446 5437 373 1 1150 1099 255 159 36 chrX 74138450 74138697 -92511599 - MTE2b LTR MaLR 0 379 85 1 1150 1519 138 0 0 chrX 74138697 74138921 -92511375 - URR1A DNA MER1_type -1 225 2 1 1150 1099 264 43 43 chrX 74138921 74139006 -92511290 - MTE2b LTR MaLR -291 88 6 1 1150 225 228 198 47 chrX 74139260 74139366 -92510930 + RLTR6_Mm LTR ERV1 1 122 -532 1 1150 2211 119 228 27 chrX 74139368 74139842 -92510454 + RLTR6_Mm LTR ERV1 37 605 -49 1 1150 64448 14 12 1 chrX 74139842 74147529 -92502767 + RLTR6-int LTR ERV1 1 7778 0 1 1150 225 228 198 47 chrX 74147529 74147635 -92502661 + RLTR6_Mm LTR ERV1 1 122 -532 1 1150 2134 114 239 26 chrX 74147637 74148089 -92502207 + RLTR6_Mm LTR ERV1 37 584 -70 1 1150 838 247 11 27 chrX 74148916 74149103 -92501193 + B4A SINE B4 43 226 -66 1 1150 602 296 140 45 chrX 74149401 74149709 -92500587 + ORR1E LTR MaLR 13 349 -10 1 1150 512 330 21 38 chrX 74151152 74151338 -92498958 - MER20 DNA MER1_type -7 212 30 1 1150 4965 154 138 13 chrX 74152417 74153285 -92497011 - RLTR25A LTR ERVK 0 1103 114 1 1150 552 30 0 0 chrX 74153285 74153351 -92496945 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 1150 4965 154 138 13 chrX 74153351 74153463 -92496833 - RLTR25A LTR ERVK -990 113 2 1 1150 553 345 126 24 chrX 74154053 74154308 -92495988 - B4A SINE B4 -10 282 2 1 1150 366 23 0 0 chrX 74154479 74154522 -92495774 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1150 403 324 27 0 chrX 74154641 74154752 -92495544 + B3A SINE B2 41 154 -44 1 1150 1093 88 0 7 chrX 74154782 74154931 -92495365 + B1_Mus1 SINE Alu 1 148 0 1 1150 627 255 69 15 chrX 74155515 74155718 -92494578 + RMER15 LTR ERVL 349 562 -13 1 1150 595 321 17 60 chrX 74156176 74156477 -92493819 + B4A SINE B4 3 290 -2 1 1150 212 219 13 52 chrX 74156480 74156557 -92493739 + (CATA)n Simple_repeat Simple_repeat 4 77 0 1 1150 36 40 0 0 chrX 74156558 74156608 -92493688 + AT_rich Low_complexity Low_complexity 1 50 0 1 1150 715 290 65 3 chrX 74157426 74157748 -92492548 + L1MA4 LINE L1 5487 5828 -472 1 1150 450 0 0 0 chrX 74157811 74157861 -92492435 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 1150 1544 198 17 10 chrX 74157933 74158210 -92492086 + RLTR12A LTR ERVK 1 279 -289 1 1150 1482 154 21 0 chrX 74158210 74158450 -92491846 + RMER19B LTR ERVK 1 245 -657 1 1150 234 101 54 33 chrX 74158460 74158552 -92491744 + A-rich Low_complexity Low_complexity 3 96 0 1 1150 2892 183 107 18 chrX 74158597 74159205 -92491091 + RMER19B LTR ERVK 229 890 -12 1 1150 1312 86 0 0 chrX 74159245 74159431 -92490865 - L1Md_F2 LINE L1 -288 6294 6109 1 1150 600 80 0 74 chrX 74159432 74159534 -92490762 + L1Md_F3 LINE L1 6457 6554 -30 2 1150 189 107 0 0 chrX 74159534 74159562 -92490734 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 1150 600 80 0 74 chrX 74159562 74159581 -92490715 + L1Md_F3 LINE L1 6555 6569 -15 2 1150 1153 170 36 9 chrX 74159600 74159825 -92490471 + RLTR12A LTR ERVK 335 565 -3 1 1150 1008 234 5 29 chrX 74160028 74160235 -92490061 + B3 SINE B2 1 202 -14 2 1150 869 216 76 0 chrX 74160523 74160773 -92489523 + Lx9 LINE L1 7302 7570 -74 2 1150 2055 165 8 11 chrX 74160774 74161129 -92489167 + ORR1B1 LTR MaLR 41 394 0 2 1150 519 60 0 0 chrX 74161135 74161202 -92489094 + (TA)n Simple_repeat Simple_repeat 1 67 0 2 1150 318 67 0 0 chrX 74161771 74161816 -92488480 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1150 682 313 34 15 chrX 74161864 74162068 -92488228 - B4 SINE B4 -84 208 1 2 1150 457 201 34 87 chrX 74163002 74163153 -92487143 + RMER17C LTR ERVK 80 232 -178 2 1150 369 0 0 0 chrX 74163153 74163194 -92487102 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1150 457 201 34 87 chrX 74163194 74163249 -92487047 + RMER17C LTR ERVK 233 275 -135 2 1150 22 35 0 0 chrX 74164059 74164088 -92486208 + AT_rich Low_complexity Low_complexity 1 29 0 2 1150 1155 286 27 0 chrX 74164093 74164425 -92485871 + MLT1A0 LTR MaLR 13 353 -12 2 1150 1897 138 58 6 chrX 74164707 74165036 -92485260 - L1_Mur2 LINE L1 -182 5704 5359 2 1150 2075 114 12 0 chrX 74165521 74165854 -92484442 - L1_Mur2 LINE L1 -511 5366 5030 2 1150 5777 181 45 12 chrX 74165859 74167099 -92483197 + Lx2B LINE L1 5717 6997 -3 2 1150 220 301 80 27 chrX 74167378 74167453 -92482843 + ID4_ SINE ID 2 80 -3 2 1150 447 256 88 6 chrX 74167439 74167559 -92482737 + ID_B1 SINE B4 113 241 -51 2 1150 765 341 63 15 chrX 74167557 74167828 -92482468 + B4A SINE B4 7 290 -2 2 1150 229 281 45 30 chrX 74167872 74167938 -92482358 + MER102c DNA MER1_type 92 158 -173 2 1150 183 283 0 0 chrX 74168309 74168355 -92481941 + L2 LINE L2 2512 2557 -862 2 1150 976 311 33 4 chrX 74168633 74168904 -92481392 - B4A SINE B4 -12 280 2 2 1150 241 286 0 0 chrX 74168908 74168964 -92481332 + (TATG)n Simple_repeat Simple_repeat 3 58 0 2 1150 19550 95 16 1 chrX 74169155 74170426 -92479870 - L1_Mus3 LINE L1 -124 6514 5235 2 1150 324 0 0 0 chrX 74170426 74170462 -92479834 + (TA)n Simple_repeat Simple_repeat 1 36 0 2 1150 360 0 0 0 chrX 74170462 74170501 -92479795 + (GA)n Simple_repeat Simple_repeat 2 41 0 2 1150 19550 129 56 3 chrX 74170501 74173267 -92477029 - L1_Mus3 LINE L1 -649 5234 2298 2 1150 17636 121 20 22 chrX 74173267 74177109 -92473187 + L1_Mus3 LINE L1 2818 6638 0 2 1150 1115 124 10 5 chrX 74177108 74177302 -92472994 - L1_Mus3 LINE L1 -3573 2310 2116 2 1150 3017 162 0 2 chrX 74177293 74177857 -92472439 - L1VL2 LINE L1 -2673 943 314 2 1150 745 286 30 30 chrX 74178519 74178717 -92471579 + B3 SINE B2 10 207 -9 2 1150 672 330 21 0 chrX 74179320 74179508 -92470788 + B3A SINE B2 1 192 -6 2 1150 762 255 54 0 chrX 74179702 74179906 -92470390 - B3 SINE B2 0 216 2 2 1150 707 285 28 33 chrX 74179921 74180135 -92470161 - B3 SINE B2 0 216 4 2 1150 4526 182 75 14 chrX 74180160 74181153 -92469143 + Lx9 LINE L1 6591 7644 0 2 1150 323 192 14 0 chrX 74181383 74181456 -92468840 + CT-rich Low_complexity Low_complexity 1 74 0 2 1150 522 342 38 6 chrX 74181885 74182044 -92468252 + B4 SINE B4 25 188 -104 2 1150 402 291 10 0 chrX 74182180 74182283 -92468013 + PB1D10 SINE Alu 10 113 -4 2 1150 327 379 0 0 chrX 74182315 74182455 -92467841 - B1F1 SINE Alu -8 141 2 2 1150 2048 128 39 21 chrX 74182830 74183164 -92467132 + ORR1B2 LTR MaLR 20 359 -8 2 1150 592 363 7 63 chrX 74183191 74183476 -92466820 - MER82 DNA MER2_type -1 652 384 2 1150 2056 259 39 23 chrX 74183491 74183938 -92466358 + Lx8 LINE L1 6709 7173 -300 2 1150 3903 52 26 6 chrX 74183938 74184442 -92465854 - L1Md_F2 LINE L1 -13 6569 6056 2 1150 2056 259 39 23 chrX 74184442 74184613 -92465683 + Lx8 LINE L1 7174 7337 -136 2 1150 226 278 84 34 chrX 74184638 74184757 -92465539 - MER82 DNA MER2_type -312 341 217 2 1150 238 257 13 26 chrX 74184882 74184958 -92465338 + CT-rich Low_complexity Low_complexity 5 79 0 2 1150 690 302 110 52 chrX 74185125 74185397 -92464899 + B4A SINE B4 3 290 -2 2 1150 1061 221 80 144 chrX 74186226 74186616 -92463680 + MTE2a LTR MaLR 1 365 -14 2 143 1221 184 66 112 chrX 74186647 74186995 -92463301 - RLTR40 LTR ERVK -21 796 465 2 1151 663 154 131 25 chrX 74186995 74187155 -92463141 - RMER1A Other Other -12 1018 842 2 1151 536 204 10 0 chrX 74187160 74187263 -92463033 - RMER1A Other Other -888 142 39 2 1151 2153 177 35 22 chrX 74187269 74187720 -92462576 - RLTR40 LTR ERVK -360 457 1 2 1151 31 26 0 0 chrX 74188913 74188951 -92461345 + AT_rich Low_complexity Low_complexity 1 38 0 2 1151 8791 80 27 5 chrX 74188951 74190170 -92460126 - Lx3_Mus LINE L1 0 7009 5764 2 1151 665 256 163 105 chrX 74190709 74190850 -92459446 - RLTR28B LTR ERVL -45 436 325 2 1151 258 32 0 0 chrX 74190850 74190881 -92459415 + (CAG)n Simple_repeat Simple_repeat 2 32 0 2 1151 665 256 163 105 chrX 74190881 74191149 -92459147 - RLTR28B LTR ERVL -157 324 3 2 1151 923 188 5 78 chrX 74192010 74192229 -92458067 - RMER10B LTR ERVL 0 398 196 2 1151 1182 159 21 92 chrX 74192219 74192308 -92457988 - RMER10B LTR ERVL -134 264 193 2 1151 996 108 0 0 chrX 74192308 74192474 -92457822 + (GA)n Simple_repeat Simple_repeat 2 167 0 2 1151 1182 159 21 92 chrX 74192474 74192668 -92457628 - RMER10B LTR ERVL -206 192 1 2 1151 549 0 0 0 chrX 74193381 74193442 -92456854 + (TCTA)n Simple_repeat Simple_repeat 1 61 0 2 1151 255 182 0 35 chrX 74194267 74194324 -92455972 + B1_Mus2 SINE Alu 84 138 -9 2 1151 252 0 0 0 chrX 74194324 74194352 -92455944 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 1151 291 157 0 0 chrX 74194359 74194410 -92455886 + G-rich Low_complexity Low_complexity 6 56 0 2 1151 326 295 0 0 chrX 74194951 74195012 -92455284 - B4 SINE B4 -8 284 224 2 1151 354 308 0 28 chrX 74195022 74195123 -92455173 - RSINE1 SINE B4 0 165 68 2 1151 1761 195 111 15 chrX 74195123 74195518 -92454778 + RMER10A LTR ERVL 1 433 -9 2 1151 577 322 0 14 chrX 74195622 74195770 -92454526 - B4 SINE B4 -64 228 83 2 1151 3098 13 0 0 chrX 74195783 74196159 -92454137 - L1Md_T LINE L1 -1497 4386 4011 2 1151 9904 22 0 0 chrX 74196157 74197361 -92452935 + L1Md_T LINE L1 4383 5586 -297 2 1151 8932 7 0 4 chrX 74197361 74198406 -92451890 + L1Md_T LINE L1 5587 6582 0 2 1151 14322 102 91 2 chrX 74198409 74200788 -92449508 + L1Md_F2 LINE L1 2996 5586 -297 2 1151 6182 95 79 3 chrX 74200788 74201708 -92448588 + L1Md_F2 LINE L1 5587 6576 -6 2 1151 3482 18 5 0 chrX 74202269 74202663 -92447633 + MTA_Mm LTR MaLR 1 396 0 2 1151 9593 16 2 0 chrX 74202663 74203759 -92446537 + MTA_Mm-int LTR MaLR 1 1098 0 2 1151 3482 18 5 0 chrX 74203759 74204153 -92446143 + MTA_Mm LTR MaLR 1 396 0 2 1151 499 300 99 25 chrX 74204223 74204588 -92445708 - L1MB3 LINE L1 -174 6006 5600 2 1151 555 311 18 12 chrX 74204746 74204909 -92445387 + B4A SINE B4 2 165 -127 2 1151 1913 290 41 30 chrX 74205889 74206554 -92443742 - Lx8 LINE L1 -1 7472 6801 2 1151 4933 130 22 40 chrX 74206581 74207527 -92442769 - Lx4B LINE L1 -1250 4627 3699 2 1151 3166 133 43 26 chrX 74207528 74208151 -92442145 + Lx4B LINE L1 4664 5297 -580 2 1151 1820 101 24 14 chrX 74208153 74208444 -92441852 + Lx LINE L1 6309 6602 -52 2 1151 7077 156 38 12 chrX 74208558 74210270 -92440026 + Lx4B LINE L1 5284 7058 0 2 1151 200 111 22 0 chrX 74210656 74210701 -92439595 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 2 1151 189 0 0 0 chrX 74211310 74211331 -92438965 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1151 473 141 0 12 chrX 74211337 74211423 -92438873 + GA-rich Low_complexity Low_complexity 1 85 0 2 1151 449 268 84 7 chrX 74211455 74211598 -92438698 - Lx8 LINE L1 -195 7278 7125 2 1151 732 42 0 0 chrX 74211763 74211859 -92438437 + (TG)n Simple_repeat Simple_repeat 2 97 0 2 1151 1077 288 17 66 chrX 74211868 74212169 -92438127 - B4 SINE B4 0 292 7 2 1151 1050 238 68 82 chrX 74212367 74212681 -92437615 + ORR1E LTR MaLR 31 400 -19 2 1151 1266 173 23 0 chrX 74212718 74212938 -92437358 + URR1B DNA MER1_type 1 225 0 2 1151 374 316 38 32 chrX 74214456 74214613 -92435683 - RSINE1 SINE B4 -6 159 2 2 1151 6602 127 29 1 chrX 74214741 74216368 -92433928 - Lx LINE L1 -7 6647 4974 2 1151 2812 99 22 2 chrX 74216369 74216782 -92433514 + BGLII LTR ERVK 1 421 0 2 1151 876 230 95 139 chrX 74217161 74217918 -92432378 + RMER3D-int LTR ERVK 652 1375 -1467 2 1151 1041 199 30 104 chrX 74217934 74218400 -92431896 + RMER3D-int LTR ERVK 1386 1694 -1148 2 1151 2814 203 102 14 chrX 74218392 74219266 -92431030 + MYSERV16_I-int LTR ERVK 1297 2247 -79 2 1151 22083 96 9 3 chrX 74219280 74223019 -92427277 + L1Md_F2 LINE L1 446 4207 -1676 2 1151 342 0 0 0 chrX 74223019 74223057 -92427239 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1151 21236 79 5 2 chrX 74223057 74223581 -92426715 + L1Md_F2 LINE L1 4208 4732 -1151 2 1151 275 0 0 28 chrX 74223581 74223617 -92426679 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1151 21236 79 5 2 chrX 74223617 74224473 -92425823 + L1Md_F2 LINE L1 4733 5584 -299 2 1151 7400 71 13 5 chrX 74224473 74225461 -92424835 + L1Md_F2 LINE L1 5587 6582 0 2 1151 262 195 26 0 chrX 74225461 74225538 -92424758 + MYSERV16_I-int LTR ERVK 2764 2842 0 2 1151 2735 98 53 2 chrX 74225541 74225939 -92424357 + BGLII LTR ERVK 4 421 0 2 1151 291 179 0 0 chrX 74225939 74225995 -92424301 - L1_Mur1 LINE L1 -905 4981 4926 2 1151 11496 158 34 26 chrX 74226539 74226898 -92423398 - L1_Mm LINE L1 -937 4946 4592 2 1151 5803 42 1 0 chrX 74226898 74227594 -92422702 + L1Md_F2 LINE L1 5886 6582 0 2 1151 11496 158 34 26 chrX 74227594 74228638 -92421658 - L1_Mm LINE L1 -1292 4591 3556 2 1151 4793 31 19 7 chrX 74228638 74229228 -92421068 + L1Md_F3 LINE L1 5988 6584 0 2 1151 11496 158 34 26 chrX 74229228 74229296 -92421000 - L1_Mm LINE L1 -2328 3555 3489 2 1151 402 21 0 0 chrX 74229296 74229343 -92420953 + (TTG)n Simple_repeat Simple_repeat 2 48 0 2 1151 11496 158 34 26 chrX 74229343 74230284 -92420012 - L1_Mm LINE L1 -2395 3488 2514 2 1151 1243 99 15 0 chrX 74230289 74230491 -92419805 + MusHAL1 LINE L1 1655 1859 -853 2 1151 2102 182 20 103 chrX 74230499 74230882 -92419414 - MTC LTR MaLR 0 421 72 2 1151 1112 171 70 8 chrX 74230882 74231124 -92419172 - Lx2A1 LINE L1 -9 6999 6743 2 1151 2102 182 20 103 chrX 74231124 74231194 -92419102 - MTC LTR MaLR -350 71 6 2 1151 534 317 103 85 chrX 74232125 74232397 -92417899 - B4 SINE B4 -13 279 3 2 1151 2301 51 0 0 chrX 74232845 74233139 -92417157 - L1_Mm LINE L1 -302 5581 5288 2 1151 12915 56 1 1 chrX 74233133 74235540 -92414756 - L1Md_F2 LINE L1 -1 6581 4176 2 1151 3001 66 57 0 chrX 74235532 74235970 -92414326 + L1Md_F2 LINE L1 3697 4159 -1724 2 1151 1296 62 0 0 chrX 74235967 74236145 -92414151 - L1_Mm LINE L1 -582 5301 5124 2 1151 607 258 82 82 chrX 74236161 74236406 -92413890 + MER2 DNA MER2_type 98 342 -3 2 1151 237 315 11 11 chrX 74236584 74236674 -92413622 + GA-rich Low_complexity Low_complexity 2 91 0 2 1151 28 0 0 0 chrX 74236942 74236970 -92413326 + AT_rich Low_complexity Low_complexity 1 28 0 2 1151 259 333 60 0 chrX 74237856 74237940 -92412356 + PB1D9 SINE Alu 27 115 -5 2 1151 241 279 87 14 chrX 74237952 74238021 -92412275 + ID2 SINE ID 1 74 -9 2 1151 554 308 14 7 chrX 74238051 74238198 -92412098 + B4 SINE B4 81 228 -64 2 1151 759 292 110 17 chrX 74238198 74238497 -92411799 + Lx8 LINE L1 7094 7420 -53 3 1151 254 89 44 0 chrX 74238526 74238571 -92411725 + (TATG)n Simple_repeat Simple_repeat 2 48 0 3 1151 459 0 0 0 chrX 74239188 74239239 -92411057 + (TAAAA)n Simple_repeat Simple_repeat 2 52 0 3 1151 324 321 40 99 chrX 74239504 74239656 -92410640 - B1F SINE Alu -6 143 1 3 1151 1040 120 17 6 chrX 74239704 74239880 -92410416 + Lx2 LINE L1 6819 6996 -1 3 1151 320 277 87 13 chrX 74240834 74240984 -92409312 + L1MA6 LINE L1 6138 6298 -2 3 1151 382 294 84 0 chrX 74240991 74241110 -92409186 + ID_B1 SINE B4 81 209 -15 3 1151 212 0 0 35 chrX 74241120 74241136 -92409160 + (TAA)n Simple_repeat Simple_repeat 1 16 0 3 1151 7412 85 23 10 chrX 74241136 74242146 -92408150 - RLTR13D5 LTR ERVK 0 1023 1 3 1151 212 0 0 35 chrX 74242146 74242158 -92408138 + (TAA)n Simple_repeat Simple_repeat 2 13 0 3 1151 29 47 0 0 chrX 74242200 74242243 -92408053 + AT_rich Low_complexity Low_complexity 1 43 0 3 1151 216 103 0 25 chrX 74242419 74242459 -92407837 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 3 1151 891 192 46 23 chrX 74242745 74242964 -92407332 - RCHARR1 DNA MER1_type -111 863 640 3 1151 1451 276 47 24 chrX 74242957 74243380 -92406916 - RCHARR1 DNA MER1_type -538 436 4 3 1151 227 274 144 45 chrX 74243618 74243729 -92406567 + B1F1 SINE Alu 21 142 -7 3 1151 246 116 0 0 chrX 74243993 74244036 -92406260 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 3 1151 256 239 97 54 chrX 74244365 74244458 -92405838 - MLT1H LTR MaLR 0 549 453 3 1151 431 295 81 98 chrX 74244839 74245012 -92405284 + B4A SINE B4 4 173 -119 3 1151 2449 27 0 0 chrX 74245539 74245839 -92404457 - L1_Mm LINE L1 -899 4984 4685 3 1151 6778 42 1 2 chrX 74245839 74246665 -92403631 + L1Md_F2 LINE L1 5757 6581 -1 3 1151 316 292 145 30 chrX 74247084 74247250 -92403046 - MIR SINE MIR -56 206 22 3 1151 779 265 138 21 chrX 74248051 74248290 -92402006 - MTE2b LTR MaLR -112 267 1 3 1151 1427 203 27 129 chrX 74249259 74249671 -92400625 + ORR1D2 LTR MaLR 1 370 0 3 1151 554 264 8 39 chrX 74249835 74249965 -92400331 + ID_B1 SINE B4 1 126 -98 3 1151 213 240 0 20 chrX 74250042 74250093 -92400203 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 3 1151 228 364 0 0 chrX 74250265 74250342 -92399954 - ID2 SINE ID 0 83 7 3 1151 1179 297 45 29 chrX 74251052 74251538 -92398758 + Lx8 LINE L1 6827 7320 -153 3 1151 697 249 105 5 chrX 74251624 74251814 -92398482 + B3 SINE B2 2 210 -6 3 1151 529 267 111 29 chrX 74251912 74252120 -92398176 - Lx8 LINE L1 -1 7472 7248 3 1151 658 304 19 19 chrX 74252158 74252363 -92397933 + Lx8 LINE L1 7034 7238 -235 3 1151 994 240 200 3 chrX 74252423 74252752 -92397544 - Lx8 LINE L1 -196 7277 6884 3 1151 4271 221 112 28 chrX 74252827 74253998 -92396298 + Lx7 LINE L1 6404 7672 -24 3 1151 23 0 0 0 chrX 74254007 74254030 -92396266 + AT_rich Low_complexity Low_complexity 1 23 0 3 1151 243 365 46 69 chrX 74255096 74255358 -92394938 + MLT1D LTR MaLR 74 329 -176 3 1151 416 224 0 34 chrX 74255358 74255446 -92394850 + B4A SINE B4 3 87 -205 3 1151 968 143 6 0 chrX 74255465 74255633 -92394663 + (GA)n Simple_repeat Simple_repeat 2 170 0 3 1151 1113 30 0 0 chrX 74255634 74255767 -92394529 + (GGAAA)n Simple_repeat Simple_repeat 3 135 0 3 1151 407 19 19 0 chrX 74255882 74255934 -92394362 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1151 640 244 71 12 chrX 74255955 74256125 -92394171 + B3A SINE B2 3 182 -16 3 1151 684 0 0 0 chrX 74256489 74256565 -92393731 + (GA)n Simple_repeat Simple_repeat 1 76 0 3 1151 488 30 0 15 chrX 74257063 74257130 -92393166 + (GA)n Simple_repeat Simple_repeat 2 67 0 3 1151 639 234 37 25 chrX 74257406 74257568 -92392728 - RMER15 LTR ERVL -76 499 336 3 1151 326 84 0 67 chrX 74257990 74258079 -92392217 + T-rich Low_complexity Low_complexity 3 85 0 3 1151 1811 98 255 0 chrX 74258570 74258888 -92391408 + MT2_Mm LTR ERVL 1 399 -94 3 1151 1912 75 4 4 chrX 74258874 74259127 -92391169 + MTA_Mm LTR MaLR 144 396 0 3 1151 13538 75 8 1 chrX 74259894 74261202 -92389094 - L1Md_F2 LINE L1 -17 6565 5249 3 1151 180 0 0 0 chrX 74261202 74261222 -92389074 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 1151 13538 68 9 0 chrX 74261222 74262441 -92387855 - L1Md_F2 LINE L1 -635 5248 4017 3 1151 470 45 14 56 chrX 74262441 74262512 -92387784 + MTB LTR MaLR 333 400 0 3 1151 401 313 0 73 chrX 74263067 74263191 -92387105 + B4A SINE B4 41 155 -137 3 1151 14465 151 45 6 chrX 74263192 74265747 -92384549 + MERVK26-int LTR ERVK 2214 4868 -2051 3 1151 6991 59 1 17 chrX 74265803 74266755 -92383541 - L1Md_F2 LINE L1 -1 6581 5645 3 1151 10577 168 40 25 chrX 74266756 74267099 -92383197 + MERVK26-int LTR ERVK 4858 5202 -1717 3 1151 672 56 0 0 chrX 74267099 74267188 -92383108 + (GGA)n Simple_repeat Simple_repeat 2 90 0 3 1151 10577 168 40 25 chrX 74267188 74267809 -92382487 + MERVK26-int LTR ERVK 5203 5832 -1087 3 1151 595 45 34 0 chrX 74267809 74267897 -92382399 - L1_Mus2 LINE L1 -2 6564 6474 3 1151 10577 168 40 25 chrX 74267897 74268960 -92381336 + MERVK26-int LTR ERVK 5833 6916 -3 3 1151 1053 257 122 55 chrX 74268963 74269366 -92380930 + RLTR26 LTR ERVK 1 430 -212 3 1151 3502 25 0 0 chrX 74269378 74269774 -92380522 + MTA_Mm LTR MaLR 1 396 0 3 1151 9475 22 2 0 chrX 74269774 74270870 -92379426 + MTA_Mm-int LTR MaLR 1 1098 0 3 1151 3535 20 0 0 chrX 74270870 74271266 -92379030 + MTA_Mm LTR MaLR 1 396 0 3 1151 394 309 101 44 chrX 74271543 74271702 -92378594 + B4A SINE B4 103 270 -22 3 1151 185 0 40 0 chrX 74271718 74271743 -92378553 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1151 825 248 24 5 chrX 74272477 74272684 -92377612 + B3 SINE B2 3 213 -3 3 1151 31943 87 10 5 chrX 74272821 74278447 -92371849 + L1Md_F2 LINE L1 399 6051 -531 3 1151 1925 114 3 19 chrX 74278447 74278761 -92371535 + L1Md_F2 LINE L1 6264 6572 -10 3 1151 345 47 0 0 chrX 74279068 74279111 -92371185 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1151 305 160 19 19 chrX 74279111 74279219 -92371077 + (TA)n Simple_repeat Simple_repeat 2 109 0 3 1151 455 194 10 0 chrX 74279268 74279371 -92370925 + (TG)n Simple_repeat Simple_repeat 2 105 0 3 1151 947 226 70 45 chrX 74279371 74279809 -92370487 - MT2B LTR ERVL -89 512 1 3 1151 5597 175 40 52 chrX 74279809 74280370 -92369926 + Lx9 LINE L1 1253 1838 -4009 3 1151 186 71 0 0 chrX 74280370 74280398 -92369898 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 1151 5597 175 40 52 chrX 74280398 74281328 -92368968 + Lx9 LINE L1 1839 2725 -3122 3 1151 2109 223 72 8 chrX 74281345 74281870 -92368426 + Lx7 LINE L1 5932 6490 -1206 3 1151 28532 126 15 5 chrX 74281980 74288317 -92361979 - L1_Mus1 LINE L1 -186 6381 103 3 1151 6360 213 39 45 chrX 74288323 74288432 -92361864 + Lx9 LINE L1 3313 3446 -2401 3 1151 3346 35 0 12 chrX 74288432 74288833 -92361463 + MTA_Mm LTR MaLR 1 396 0 3 1151 6360 212 39 45 chrX 74288833 74289067 -92361229 + Lx9 LINE L1 3447 3655 -2192 3 1151 192 97 0 0 chrX 74289067 74289098 -92361198 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1151 441 0 0 0 chrX 74289099 74289148 -92361148 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 1151 6360 225 39 51 chrX 74289148 74290975 -92359321 + Lx9 LINE L1 3641 5383 -497 3 1151 4875 57 21 5 chrX 74290975 74291597 -92358699 + L1_Mus2 LINE L1 5933 6564 -2 3 1151 5645 238 46 43 chrX 74291597 74293685 -92356611 + Lx9 LINE L1 5384 7596 -48 3 1151 1236 228 99 52 chrX 74294451 74294794 -92355502 - ORR1E LTR MaLR 0 359 1 3 1151 325 312 70 26 chrX 74295559 74295674 -92354622 + B4A SINE B4 1 120 -172 3 1151 295 213 83 159 chrX 74295674 74295704 -92354592 + B3A SINE B2 1 134 -64 3 1151 1140 278 34 97 chrX 74295761 74296144 -92354152 - ORR1E LTR MaLR 0 359 1 3 1151 807 333 10 47 chrX 74296956 74297255 -92353041 - B4A SINE B4 -4 288 1 3 1151 652 325 118 55 chrX 74297919 74298300 -92351996 - MTD LTR MaLR -14 405 1 3 1151 1484 133 0 9 chrX 74298346 74298573 -92351723 + URR1A DNA MER1_type 1 225 -1 3 1151 1583 217 65 3 chrX 74298795 74299133 -92351163 - MTE2b LTR MaLR -18 361 3 3 1151 267 352 19 0 chrX 74299291 74299399 -92350897 + PB1D10 SINE Alu 1 110 -7 3 1151 483 33 0 0 chrX 74299635 74299696 -92350600 + (CA)n Simple_repeat Simple_repeat 1 61 0 3 1151 2781 94 13 2 chrX 74299696 74300089 -92350207 - MTB LTR MaLR 0 400 4 3 1151 459 35 0 0 chrX 74300089 74300146 -92350150 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1151 624 123 0 0 chrX 74300146 74300260 -92350036 + (GA)n Simple_repeat Simple_repeat 1 114 0 3 1151 726 62 26 9 chrX 74301248 74301361 -92348935 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 3 1151 1467 276 84 6 chrX 74302179 74302724 -92347572 + Lx6 LINE L1 6484 7434 -26 3 1151 876 338 21 14 chrX 74302846 74303125 -92347171 + B4 SINE B4 10 290 -2 3 1151 249 296 20 20 chrX 74303306 74303406 -92346890 - L2a LINE L2 -110 3316 3217 3 1151 400 369 70 48 chrX 74303459 74303789 -92346507 - MLT1E LTR MaLR -3 650 314 3 1151 4693 95 24 7 chrX 74303822 74304500 -92345796 - L1Md_F2 LINE L1 -13 6569 5881 3 1151 5219 102 1 0 chrX 74304500 74305275 -92345021 - L1_Mm LINE L1 -327 5556 4781 3 1151 34573 60 1 3 chrX 74305271 74311224 -92339072 - L1Md_F2 LINE L1 -1 6581 638 3 1151 436 178 100 0 chrX 74311225 74311315 -92338981 - L1Md_F2 LINE L1 -6137 501 403 3 1151 226 361 0 0 chrX 74311316 74311388 -92338908 - MLT1E LTR MaLR -382 178 107 3 1151 315 0 0 0 chrX 74311693 74311728 -92338568 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1151 455 327 65 20 chrX 74311860 74312013 -92338283 + RSINE1 SINE B4 4 163 -2 3 1151 21 0 0 0 chrX 74312013 74312034 -92338262 + AT_rich Low_complexity Low_complexity 1 21 0 3 1151 233 119 24 0 chrX 74312121 74312163 -92338133 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 3 1151 324 0 0 0 chrX 74312248 74312284 -92338012 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1151 645 291 7 7 chrX 74312958 74313107 -92337189 + B3A SINE B2 14 162 -36 3 1151 29 0 0 0 chrX 74313107 74313136 -92337160 + AT_rich Low_complexity Low_complexity 1 29 0 3 1151 788 252 69 10 chrX 74313188 74313392 -92336904 + B3 SINE B2 1 216 0 3 1151 534 255 214 16 chrX 74313410 74313597 -92336699 + MTD LTR MaLR 196 419 0 3 1151 329 307 6 32 chrX 74313606 74313764 -92336532 + (CATATA)n Simple_repeat Simple_repeat 2 155 0 3 1151 249 146 0 0 chrX 74313779 74313827 -92336469 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1151 293 0 27 0 chrX 74314332 74314369 -92335927 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 4 1151 6720 115 57 5 chrX 74314369 74315486 -92334810 - Lx3_Mus LINE L1 -23 6986 5811 4 1151 367 306 18 9 chrX 74315486 74315595 -92334701 - MTD LTR MaLR -217 202 93 4 1151 687 25 0 0 chrX 74315597 74315678 -92334618 + (TC)n Simple_repeat Simple_repeat 2 82 0 4 1151 657 25 0 0 chrX 74315678 74315756 -92334540 + (TG)n Simple_repeat Simple_repeat 2 80 0 4 1151 819 299 52 59 chrX 74316392 74316662 -92333634 - B4A SINE B4 -18 274 7 4 1151 28 29 0 0 chrX 74316871 74316906 -92333390 + AT_rich Low_complexity Low_complexity 1 35 0 4 1151 2183 212 58 3 chrX 74316907 74317796 -92332500 + Lx7 LINE L1 5269 6200 -1496 4 143 2176 256 33 37 chrX 74317789 74318434 -92331862 + Lx7 LINE L1 6737 7378 -318 4 1152 280 307 0 0 chrX 74318471 74318572 -92331724 + Lx7 LINE L1 7579 7679 -17 4 1152 2923 27 0 0 chrX 74318950 74319284 -92331012 - IAPLTR1a_Mm LTR ERVK -3 334 1 4 1152 9413 24 3 4 chrX 74319284 74320423 -92329873 - IAPEz-int LTR ERVK 0 6481 5345 4 1152 25013 31 17 11 chrX 74320412 74323553 -92326743 - IAPEz-int LTR ERVK -3316 3165 8 4 1152 2942 30 0 0 chrX 74323553 74323890 -92326406 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1152 2883 73 3 3 chrX 74323892 74324278 -92326018 + MTB LTR MaLR 15 400 0 4 1152 431 302 128 26 chrX 74324533 74324798 -92325498 + B4A SINE B4 1 292 0 4 1152 267 190 0 0 chrX 74324798 74324856 -92325440 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 1152 472 259 34 115 chrX 74325033 74325242 -92325054 - MER5C1 DNA MER1_type 0 263 72 4 1152 458 247 201 86 chrX 74325270 74325664 -92324632 + L1MEd LINE L1 579 1017 -5102 4 1152 882 293 38 38 chrX 74325756 74326047 -92324249 + B4A SINE B4 1 291 -1 4 1152 215 389 0 0 chrX 74326052 74326142 -92324154 + (CA)n Simple_repeat Simple_repeat 1 90 0 4 1152 370 85 0 0 chrX 74326146 74326193 -92324103 + HAL1-3A_ME LINE L1 1975 2021 -837 4 1152 480 293 105 135 chrX 74326490 74326757 -92323539 + MLT1F2 LTR MaLR 312 569 0 4 1152 2188 191 28 2 chrX 74326853 74327252 -92323044 + MTC LTR MaLR 1 409 -12 4 1152 290 275 73 24 chrX 74327413 74327536 -92322760 - BC1_Mm scRNA scRNA -22 130 2 4 1152 798 99 0 0 chrX 74327633 74327764 -92322532 + (TC)n Simple_repeat Simple_repeat 2 132 0 4 1152 410 266 166 19 chrX 74327764 74327921 -92322375 - MLT1B LTR MaLR -207 183 4 4 1152 1079 308 3 38 chrX 74328602 74328892 -92321404 + B4 SINE B4 9 288 -4 4 1152 183 222 0 0 chrX 74329613 74329658 -92320638 + GA-rich Low_complexity Low_complexity 3 47 0 4 1152 209 253 24 48 chrX 74329672 74329755 -92320541 + GA-rich Low_complexity Low_complexity 2 82 0 4 1152 295 176 28 14 chrX 74329748 74329891 -92320405 + (TAGA)n Simple_repeat Simple_repeat 1 145 0 4 1152 273 57 0 0 chrX 74329891 74329926 -92320370 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 1152 522 70 0 0 chrX 74329939 74330010 -92320286 + (TAGA)n Simple_repeat Simple_repeat 3 73 0 4 1152 575 290 6 33 chrX 74330043 74330225 -92320071 + Lx8 LINE L1 6925 7101 -372 4 1152 483 242 1 35 chrX 74330226 74330349 -92319947 + B4 SINE B4 107 228 -64 4 1152 576 324 28 33 chrX 74330349 74330563 -92319733 + ID_B1 SINE B4 1 213 -11 4 1152 458 263 21 35 chrX 74330563 74330581 -92319715 + B4A SINE B4 229 246 -46 4 1152 393 129 0 0 chrX 74330581 74330651 -92319645 + (GA)n Simple_repeat Simple_repeat 1 70 0 4 1152 321 270 0 0 chrX 74330652 74330715 -92319581 + B4 SINE B4 229 291 -1 4 1152 1557 122 73 7 chrX 74330730 74331003 -92319293 + Lx3_Mus LINE L1 6708 6998 -11 4 1152 357 24 0 0 chrX 74331022 74331064 -92319232 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 4 1152 378 0 0 0 chrX 74331155 74331197 -92319099 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 4 1152 482 333 32 19 chrX 74331198 74331505 -92318791 + Lx7 LINE L1 5594 5896 -1800 4 1152 395 275 169 59 chrX 74331589 74331844 -92318452 + B4A SINE B4 6 288 -4 4 1152 829 214 43 29 chrX 74333185 74333392 -92316904 - RMER5 LTR ERV1 -9 525 316 4 1152 964 208 6 0 chrX 74333801 74333979 -92316317 + B3A SINE B2 4 182 -16 4 1152 412 351 9 0 chrX 74334060 74334171 -92316125 - B4A SINE B4 -166 126 15 4 1152 1717 131 14 0 chrX 74334496 74334771 -92315525 - L1_Mm LINE L1 -104 5779 5501 4 1152 537 102 20 39 chrX 74334772 74334874 -92315422 + Lx LINE L1 6463 6562 -92 4 1152 3389 65 2 7 chrX 74334875 74335324 -92314972 + L1Md_F2 LINE L1 6122 6568 -14 4 1152 436 71 0 76 chrX 74335337 74335429 -92314867 + L1_Mur2 LINE L1 4326 4410 -1467 4 1152 258 299 151 28 chrX 74335441 74335620 -92314676 - MamRep1161 DNA TcMar -316 641 441 4 1152 581 78 0 47 chrX 74335620 74335727 -92314569 + Lx LINE L1 6549 6650 -4 4 1152 666 256 7 10 chrX 74336594 74336733 -92313563 + B3A SINE B2 8 142 -51 4 1152 390 284 55 28 chrX 74336769 74336986 -92313310 + Lx5 LINE L1 5657 5915 -1135 4 1152 378 0 0 0 chrX 74337020 74337062 -92313234 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1152 528 81 0 0 chrX 74337427 74337501 -92312795 + (TCTA)n Simple_repeat Simple_repeat 2 75 0 4 1152 338 270 27 0 chrX 74337512 74337586 -92312710 - ID4_ SINE ID -5 78 3 4 1152 267 309 0 47 chrX 74337610 74337695 -92312601 - PB1D10 SINE Alu -20 97 17 4 1152 273 311 34 96 chrX 74337635 74337781 -92312515 - ID_B1 SINE B4 -71 153 17 4 1152 810 302 69 36 chrX 74337921 74338168 -92312128 + B4 SINE B4 10 264 -28 4 1152 207 0 0 0 chrX 74338190 74338213 -92312083 + (CA)n Simple_repeat Simple_repeat 1 23 0 4 1152 207 0 0 0 chrX 74338314 74338337 -92311959 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1152 27788 114 27 3 chrX 74338684 74340239 -92310057 + L1Md_F2 LINE L1 380 1967 -3916 4 1152 207 0 0 0 chrX 74340239 74340262 -92310034 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1152 27788 99 9 7 chrX 74340262 74343866 -92306430 + L1Md_F2 LINE L1 1968 5585 -298 4 1152 7563 71 0 4 chrX 74343867 74344854 -92305442 + L1Md_F2 LINE L1 5588 6570 -12 4 1152 726 316 70 51 chrX 74344914 74345171 -92305125 + B4 SINE B4 5 266 -26 4 1152 183 42 0 0 chrX 74345184 74345208 -92305088 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1152 656 294 91 16 chrX 74345590 74345842 -92304454 - B4 SINE B4 -18 274 4 4 1152 267 307 80 74 chrX 74346803 74346965 -92303331 + MLT1F2 LTR MaLR 77 239 -321 4 1152 243 324 53 44 chrX 74347458 74347571 -92302725 + MLT1A0 LTR MaLR 20 133 -232 4 1152 2811 28 2 140 chrX 74347871 74348321 -92301975 + RLTR10 LTR ERVK 1 388 -2 4 1152 2683 253 32 30 chrX 74348705 74348901 -92301395 + Lx7 LINE L1 6602 6798 -898 4 1152 1370 209 248 77 chrX 74348901 74348947 -92301349 - MT2A LTR ERVL 0 533 458 4 1152 234 0 0 0 chrX 74348947 74348973 -92301323 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1152 1370 209 248 77 chrX 74348973 74349381 -92300915 - MT2A LTR ERVL -76 457 2 4 1152 2683 253 32 30 chrX 74349381 74349963 -92300333 + Lx7 LINE L1 6799 7381 -315 4 1152 252 86 0 0 chrX 74350014 74350049 -92300247 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1152 857 105 113 0 chrX 74350049 74350173 -92300123 - B1_Mus1 SINE Alu -10 138 1 4 1152 524 304 99 23 chrX 74351107 74351370 -92298926 + B4A SINE B4 2 284 -8 4 1152 2646 100 0 6 chrX 74351476 74351946 -92298350 - L1_Mus1 LINE L1 -594 5973 5507 4 1152 4607 58 26 25 chrX 74351948 74352554 -92297742 + L1_Mus1 LINE L1 5961 6567 0 4 1152 251 359 97 13 chrX 74353035 74353068 -92297228 + B4A SINE B4 53 98 -194 4 1152 365 293 54 13 chrX 74353068 74353198 -92297098 + B1F1 SINE Alu 1 132 -15 4 1152 227 375 0 0 chrX 74353226 74353306 -92296990 + ID4_ SINE ID 3 82 -1 4 1152 392 304 0 29 chrX 74353337 74353442 -92296854 + B4 SINE B4 49 150 -142 4 1152 3744 134 28 9 chrX 74353423 74353996 -92296300 + RMER19A LTR ERVK 154 737 0 4 1152 294 239 23 0 chrX 74354030 74354118 -92296178 + Lx8 LINE L1 6857 6946 -527 4 1152 215 167 62 0 chrX 74354385 74354433 -92295863 + GA-rich Low_complexity Low_complexity 1 51 0 4 1152 318 237 26 26 chrX 74354505 74354622 -92295674 + GA-rich Low_complexity Low_complexity 2 118 0 4 1152 274 331 13 33 chrX 74355410 74355560 -92294736 + GA-rich Low_complexity Low_complexity 2 148 0 4 1152 310 301 80 93 chrX 74355560 74355710 -92294586 + HAL1-3A_ME LINE L1 2292 2439 -419 4 1152 935 205 108 0 chrX 74355798 74355983 -92294313 + RMER15 LTR ERVL 272 476 -99 4 1152 276 242 19 19 chrX 74356015 74356171 -92294125 + GA-rich Low_complexity Low_complexity 1 156 0 4 1152 519 194 9 53 chrX 74356850 74356964 -92293332 - PB1D10 SINE Alu 0 117 9 4 1152 396 284 33 66 chrX 74357047 74357288 -92293008 + L1MB8 LINE L1 5946 6178 0 4 1152 504 48 0 0 chrX 74357294 74357357 -92292939 + (TC)n Simple_repeat Simple_repeat 1 63 0 4 1152 450 0 0 0 chrX 74357357 74357406 -92292890 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1152 273 274 45 140 chrX 74357436 74357615 -92292681 + MLT1F1 LTR MaLR 248 382 -187 4 1152 205 51 0 49 chrX 74357631 74357672 -92292624 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1152 2668 238 34 183 chrX 74357875 74358171 -92292125 - RMER1B Other Other -11 1055 788 4 1152 486 0 0 0 chrX 74358171 74358225 -92292071 + (GA)n Simple_repeat Simple_repeat 2 55 0 4 1152 2668 238 34 183 chrX 74358225 74359153 -92291143 - RMER1B Other Other -279 787 14 4 1152 475 278 98 84 chrX 74359528 74359803 -92290493 - B4A SINE B4 -12 280 2 4 1152 400 48 32 0 chrX 74359860 74359923 -92290373 + (TG)n Simple_repeat Simple_repeat 1 65 0 4 1152 1497 141 78 164 chrX 74360121 74360401 -92289895 + ORR1A3 LTR MaLR 1 287 -39 4 1152 1118 88 0 0 chrX 74360401 74360548 -92289748 + B1_Mus1 SINE Alu 1 147 -1 4 1152 1497 141 78 164 chrX 74360548 74360615 -92289681 + ORR1A3 LTR MaLR 288 318 -8 4 1152 490 288 16 0 chrX 74360946 74361056 -92289240 + B3A SINE B2 72 183 -15 4 1152 618 51 0 0 chrX 74361056 74361134 -92289162 + (CA)n Simple_repeat Simple_repeat 1 78 0 4 1152 490 288 16 0 chrX 74361134 74361148 -92289148 + B3A SINE B2 184 197 -1 4 1152 576 281 99 25 chrX 74361155 74361356 -92288940 + B3 SINE B2 1 216 0 4 1152 192 40 0 0 chrX 74361950 74361975 -92288321 + (TCTCC)n Simple_repeat Simple_repeat 2 26 0 4 1152 495 87 0 0 chrX 74362131 74362200 -92288096 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 1152 899 270 144 23 chrX 74362328 74362681 -92287615 - MTD LTR MaLR -18 401 6 4 1152 396 0 0 0 chrX 74362758 74362802 -92287494 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1152 564 266 132 17 chrX 74363473 74363865 -92286431 + L1M1 LINE L1 5380 5833 -458 5 1152 532 266 154 81 chrX 74363865 74364078 -92286218 + B4A SINE B4 5 233 -59 5 1152 367 298 19 9 chrX 74364078 74364183 -92286113 + B3 SINE B2 3 108 -108 5 1152 382 279 57 9 chrX 74364330 74364435 -92285861 + B3 SINE B2 107 216 0 5 1152 264 280 0 0 chrX 74364544 74364619 -92285677 + L1M1 LINE L1 5817 5891 -412 5 1152 474 18 0 0 chrX 74364668 74364723 -92285573 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 1152 26 64 0 0 chrX 74364881 74364928 -92285368 + AT_rich Low_complexity Low_complexity 1 47 0 5 1152 288 0 0 0 chrX 74366031 74366063 -92284233 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 5 1152 989 167 107 5 chrX 74366299 74366504 -92283792 - URR1A DNA MER1_type 0 226 1 5 1152 450 0 0 0 chrX 74366810 74366860 -92283436 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1152 440 279 76 12 chrX 74366866 74367080 -92283216 - B4 SINE B4 -12 280 2 5 1152 216 0 0 0 chrX 74367635 74367659 -92282637 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1152 27 0 0 0 chrX 74367755 74367782 -92282514 + AT_rich Low_complexity Low_complexity 1 27 0 5 1152 932 286 94 35 chrX 74367806 74368285 -92282011 - Lx9 LINE L1 -27 7617 7111 5 1152 522 157 0 0 chrX 74368361 74368463 -92281833 + (CCTG)n Simple_repeat Simple_repeat 1 102 0 5 1152 821 343 5 9 chrX 74368759 74368977 -92281319 + B4A SINE B4 76 292 0 5 1152 516 81 0 0 chrX 74369639 74369713 -92280583 + (TG)n Simple_repeat Simple_repeat 2 75 0 5 1152 692 301 36 0 chrX 74369749 74369942 -92280354 - B4A SINE B4 -9 283 84 5 1152 653 255 88 58 chrX 74369967 74370415 -92279881 - RLTR15 LTR ERVK -38 490 17 5 1152 233 299 134 0 chrX 74370433 74370500 -92279796 - B4A SINE B4 -216 76 1 5 1152 1558 78 0 0 chrX 74370725 74370929 -92279367 + L1_Mus1 LINE L1 6364 6567 0 5 1152 31 26 0 0 chrX 74370994 74371032 -92279264 + AT_rich Low_complexity Low_complexity 1 38 0 5 1152 272 312 0 88 chrX 74371046 74371148 -92279148 + MLT1A0 LTR MaLR 1 93 -272 5 1152 1684 255 7 9 chrX 74371350 74371770 -92278526 - MTD LTR MaLR 0 419 1 5 1152 188 143 24 0 chrX 74372033 74372075 -92278221 + (CCA)n Simple_repeat Simple_repeat 2 44 0 5 1152 897 144 0 0 chrX 74372169 74372343 -92277953 + (TC)n Simple_repeat Simple_repeat 1 174 0 5 1152 226 378 11 0 chrX 74372403 74372493 -92277803 - PB1D10 SINE Alu -3 114 24 5 1152 17756 97 13 2 chrX 74372747 74376168 -92274128 - L1_Mus1 LINE L1 0 6567 3108 5 1152 546 29 0 0 chrX 74376507 74376575 -92273721 + (TG)n Simple_repeat Simple_repeat 2 69 0 5 1152 815 304 40 22 chrX 74376575 74376627 -92273669 - B4 SINE B4 -22 270 220 5 1152 195 42 0 0 chrX 74376627 74376651 -92273645 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1152 815 304 40 22 chrX 74376651 74376860 -92273436 - B4 SINE B4 -73 219 4 5 1152 344 277 124 89 chrX 74377148 74377350 -92272946 + MER20 DNA MER1_type 11 219 0 5 1152 437 334 190 5 chrX 74377369 74377601 -92272695 + B4 SINE B4 3 277 -15 5 1152 248 283 17 0 chrX 74377621 74377681 -92272615 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1152 1682 212 16 29 chrX 74378133 74378512 -92271784 - ORR1D1 LTR MaLR 0 374 1 5 1152 1019 116 0 13 chrX 74378650 74378799 -92271497 + B1_Mus1 SINE Alu 2 148 0 5 1152 225 132 0 0 chrX 74378800 74378838 -92271458 + (A)n Simple_repeat Simple_repeat 1 38 0 5 1152 3638 72 0 2 chrX 74379118 74379620 -92270676 + L1_Mm LINE L1 4452 4952 -931 5 1152 695 24 0 0 chrX 74379619 74379704 -92270592 + L1Md_F2 LINE L1 5687 5771 -811 5 1152 1840 51 0 8 chrX 74379710 74379946 -92270350 + L1Md_F2 LINE L1 6346 6579 -3 5 1152 22848 98 14 5 chrX 74380041 74384256 -92266040 + L1Md_F2 LINE L1 392 4644 -1239 5 1152 3413 35 2 0 chrX 74384256 74384651 -92265645 - MTA_Mm LTR MaLR 0 396 1 5 1152 428 91 0 0 chrX 74384651 74384717 -92265579 - MTA_Mm-int LTR MaLR 0 1098 1033 5 1152 11362 55 0 2 chrX 74384724 74386916 -92263380 - L1Md_F2 LINE L1 -12 6570 4381 5 1152 7362 76 27 2 chrX 74386916 74387941 -92262355 - MTA_Mm-int LTR MaLR -46 1052 2 5 1152 3348 43 2 0 chrX 74387943 74388337 -92261959 - MTA_Mm LTR MaLR -1 395 1 5 1152 6625 84 0 5 chrX 74388337 74389289 -92261007 + L1Md_F2 LINE L1 4639 5585 -298 5 1152 7363 72 4 16 chrX 74389290 74390298 -92259998 + L1Md_F2 LINE L1 5587 6582 0 5 1152 934 137 7 0 chrX 74390316 74390462 -92259834 + B1_Mm SINE Alu 1 147 0 5 1152 1408 71 0 0 chrX 74390473 74390656 -92259640 + L1_Mus1 LINE L1 6385 6567 0 5 1152 6294 39 1 0 chrX 74391168 74391920 -92258376 + L1Md_T LINE L1 5827 6579 -3 5 1152 858 278 77 22 chrX 74391989 74392261 -92258035 - ORR1E LTR MaLR 0 359 73 5 1152 339 307 0 11 chrX 74392367 74392456 -92257840 + B4A SINE B4 205 292 0 5 1152 966 223 10 48 chrX 74392790 74392997 -92257299 - B3 SINE B2 -2 214 16 5 1152 478 289 22 0 chrX 74393014 74393149 -92257147 - B1F1 SINE Alu -11 138 1 5 1152 505 294 157 29 chrX 74394249 74394491 -92255805 - B4A SINE B4 -18 274 2 5 1152 327 25 0 0 chrX 74394647 74394687 -92255609 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1152 584 50 12 0 chrX 74394689 74394769 -92255527 + (GA)n Simple_repeat Simple_repeat 2 82 0 5 1152 473 319 67 34 chrX 74394783 74394932 -92255364 - B4A SINE B4 -136 156 3 5 1152 185 138 0 0 chrX 74395922 74395951 -92254345 + L2c LINE L2 3357 3385 -2 5 1152 2490 92 3 72 chrX 74395967 74396353 -92253943 - RLTR10D LTR ERVK 0 359 1 5 1152 464 244 11 0 chrX 74396466 74396556 -92253740 + B4A SINE B4 4 94 -198 5 1152 246 182 0 0 chrX 74396558 74396624 -92253672 + GA-rich Low_complexity Low_complexity 3 68 0 5 1152 1023 115 0 0 chrX 74396627 74396784 -92253512 + (GAA)n Simple_repeat Simple_repeat 3 159 0 5 1152 241 338 86 12 chrX 74396786 74396867 -92253429 + B4A SINE B4 86 172 -120 5 1152 277 118 167 26 chrX 74397050 74397128 -92253168 + Lx8 LINE L1 7384 7472 -1 5 1152 8132 204 59 26 chrX 74397189 74399150 -92251146 - Lx7 LINE L1 0 7696 5672 5 1152 289 152 0 0 chrX 74399151 74399197 -92251099 - ORR1C2 LTR MaLR 0 384 339 5 1152 672 343 9 0 chrX 74400574 74400787 -92249509 + ID_B1 SINE B4 1 215 -9 5 1152 450 0 0 0 chrX 74400787 74400837 -92249459 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 5 1152 319 238 0 31 chrX 74401061 74401126 -92249170 - ID4_ SINE ID -19 64 2 5 1152 252 286 26 85 chrX 74401233 74401386 -92248910 + RMER15 LTR ERVL 14 157 -418 5 1152 318 26 0 0 chrX 74401478 74401517 -92248779 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 5 1152 546 261 79 7 chrX 74401535 74401674 -92248622 + RMER15 LTR ERVL 422 570 -5 5 1152 229 204 18 36 chrX 74402138 74402194 -92248102 + (TATG)n Simple_repeat Simple_repeat 2 56 0 5 1152 662 361 21 50 chrX 74402315 74402509 -92247787 + B4A SINE B4 19 218 -74 5 1152 441 0 0 0 chrX 74402509 74402558 -92247738 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1152 989 204 40 0 chrX 74402561 74402762 -92247534 + B3 SINE B2 3 211 -5 5 1152 662 361 21 50 chrX 74402762 74402843 -92247453 + B4A SINE B4 219 290 -2 5 1152 23967 138 16 13 chrX 74403018 74407327 -92242969 - L1_Mus3 LINE L1 -2 6636 2312 5 1152 225 0 0 0 chrX 74407327 74407352 -92242944 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 1152 23967 150 13 13 chrX 74407352 74408839 -92241457 - L1_Mus3 LINE L1 -3572 2311 824 5 1152 24 0 0 0 chrX 74408991 74409015 -92241281 + AT_rich Low_complexity Low_complexity 1 24 0 5 1152 381 293 123 109 chrX 74409811 74410087 -92240209 - B4 SINE B4 -10 282 3 5 1152 295 237 140 70 chrX 74410323 74410423 -92239873 + ORR1C1 LTR MaLR 5 111 -267 5 1152 4807 118 26 14 chrX 74410586 74411984 -92238312 + L1Md_F LINE L1 352 1765 -4118 5 1152 33566 45 6 8 chrX 74411982 74417399 -92232897 + L1Md_T LINE L1 180 5586 -297 5 1152 8244 39 4 0 chrX 74417399 74418390 -92231906 + L1Md_T LINE L1 5587 6581 -1 5 1152 2743 32 0 3 chrX 74418390 74418732 -92231564 + L1Md_A LINE L1 5246 5586 -297 5 1152 8377 36 0 0 chrX 74418732 74419727 -92230569 + L1Md_A LINE L1 5587 6581 -1 5 1152 854 54 0 0 chrX 74419803 74419915 -92230381 + L1_Mm LINE L1 1753 1864 -4019 5 1152 7108 65 7 28 chrX 74419917 74421111 -92229185 - L1Md_F3 LINE L1 0 6584 5411 5 1152 32233 84 2 4 chrX 74421126 74426375 -92223921 - L1Md_A LINE L1 -129 5754 509 5 1152 3489 54 0 9 chrX 74426375 74426821 -92223475 + L1Md_F2 LINE L1 6129 6570 -12 5 1152 4780 160 7 48 chrX 74426821 74426912 -92223384 - L1Md_A LINE L1 -6216 508 449 5 1152 318 265 33 25 chrX 74427723 74427843 -92222453 + L1MC LINE L1 5188 5308 -838 5 1152 477 304 0 0 chrX 74427843 74427955 -92222341 + RSINE1 SINE B4 2 113 -52 5 1152 296 269 31 19 chrX 74428012 74428171 -92222125 + L1ME1 LINE L1 5381 5541 -621 5 1152 4211 63 15 2 chrX 74428210 74428753 -92221543 + L1_Mus1 LINE L1 6018 6567 0 5 1152 347 327 119 22 chrX 74429033 74429260 -92221036 + L1ME1 LINE L1 5874 6126 -1659 5 1152 402 331 77 31 chrX 74429276 74429429 -92220867 - B3A SINE B2 -19 197 57 5 1152 4258 151 3 5 chrX 74429429 74430175 -92220121 + L1_Mur2 LINE L1 4926 5669 -208 5 1152 21 36 0 0 chrX 74430278 74430306 -92219990 + AT_rich Low_complexity Low_complexity 1 28 0 5 1152 1222 241 132 16 chrX 74430648 74431020 -92219276 - MTD LTR MaLR 0 419 5 5 1152 394 317 89 8 chrX 74431058 74431182 -92219114 + RSINE1 SINE B4 2 135 -30 5 1152 336 24 0 0 chrX 74431182 74431223 -92219073 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1152 559 316 166 32 chrX 74431307 74431650 -92218646 - MLT1A1 LTR MaLR 0 408 20 5 1152 289 75 0 0 chrX 74432016 74432056 -92218240 + B3A SINE B2 3 42 -156 5 1152 387 123 5 2 chrX 74432060 74432119 -92218177 + MTC LTR MaLR 5 65 -331 5 1152 237 186 0 0 chrX 74432619 74432662 -92217634 + MTE2b LTR MaLR 1 43 -336 5 1152 1289 240 58 116 chrX 74432660 74433056 -92217240 + MTE2a LTR MaLR 5 377 -2 5 1152 346 316 17 17 chrX 74433122 74433241 -92217055 - Cheshire DNA MER1_type -2135 285 167 5 1152 7035 70 37 4 chrX 74433770 74434717 -92215579 + L1Md_F2 LINE L1 5605 6582 0 5 1152 26 0 0 0 chrX 74434750 74434776 -92215520 + AT_rich Low_complexity Low_complexity 1 26 0 5 1152 222 217 47 35 chrX 74435482 74435568 -92214728 + (TAGA)n Simple_repeat Simple_repeat 2 88 0 5 1152 441 124 10 20 chrX 74435571 74435670 -92214626 + (CATA)n Simple_repeat Simple_repeat 2 99 0 5 1152 542 82 12 0 chrX 74435708 74435793 -92214503 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 6 1152 234 242 63 6 chrX 74435846 74436004 -92214292 + (TAGA)n Simple_repeat Simple_repeat 4 170 0 6 1152 204 278 186 44 chrX 74436301 74436414 -92213882 - MIRm SINE MIR -141 135 7 6 1152 746 258 38 0 chrX 74436642 74436828 -92213468 - Lx9 LINE L1 -301 7343 7151 6 1152 339 244 23 47 chrX 74437010 74437096 -92213200 - B3 SINE B2 0 216 133 6 1152 257 287 10 60 chrX 74437415 74437515 -92212781 + RSINE1 SINE B4 71 165 0 6 1152 1137 70 0 0 chrX 74438269 74438411 -92211885 + B1_Mm SINE Alu 1 142 -5 6 1152 243 48 62 31 chrX 74438411 74438475 -92211821 + (CAAAA)n Simple_repeat Simple_repeat 2 67 0 6 1152 382 106 47 0 chrX 74438685 74438770 -92211526 + (CAGAGA)n Simple_repeat Simple_repeat 6 94 0 6 1152 485 308 220 0 chrX 74438787 74439014 -92211282 + B4A SINE B4 3 279 -13 6 1152 259 164 16 16 chrX 74439024 74439086 -92211210 + GA-rich Low_complexity Low_complexity 3 64 0 6 1152 848 215 27 150 chrX 74439475 74439842 -92210454 + RLTRETN_Mm LTR ERVK 1 322 0 6 1152 6118 121 25 75 chrX 74439846 74441074 -92209222 + MMETn-int LTR ERVK 3 1169 -3675 6 1152 2314 136 22 55 chrX 74441072 74441721 -92208575 + MMETn-int LTR ERVK 1730 3019 -4387 6 1152 4672 156 38 18 chrX 74441957 74443617 -92206679 + MMETn-int LTR ERVK 2356 4085 -3321 6 1152 261 215 30 15 chrX 74443586 74443652 -92206644 + MMETn-int LTR ERVK 6127 6193 -1213 6 1152 495 161 0 21 chrX 74443652 74443747 -92206549 + ETnERV-int LTR ERVK 2038 2130 -1184 6 1152 26069 81 88 8 chrX 74443764 74447954 -92202342 - L1Md_F2 LINE L1 0 6582 1975 6 1152 288 53 0 0 chrX 74447954 74447992 -92202304 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 6 17 26069 68 59 5 chrX 74447992 74449384 -92200912 - L1Md_F2 LINE L1 -3909 1974 555 6 1153 5771 131 14 1 chrX 74449393 74450264 -92200032 + MMETn-int LTR ERVK 6262 7143 -263 6 1153 448 251 262 36 chrX 74450264 74450622 -92199674 + RLTR13D6 LTR ERVK 92 531 -371 6 1153 415 93 25 74 chrX 74450625 74450706 -92199590 + ETnERV2-int LTR ERVK 7327 7403 -3 6 1153 907 208 28 136 chrX 74450708 74451069 -92199227 + RLTRETN_Mm LTR ERVK 1 322 0 6 1153 3135 197 82 11 chrX 74451215 74451997 -92198299 + Lx9 LINE L1 6807 7643 -1 6 1153 594 314 26 20 chrX 74452006 74452201 -92198095 + B4 SINE B4 81 276 -16 6 1153 227 300 0 0 chrX 74452262 74452322 -92197974 + LTR40a LTR ERVL 180 239 -280 6 1153 550 288 88 0 chrX 74452620 74452780 -92197516 - MTE2b LTR MaLR -205 174 1 6 1153 198 365 0 0 chrX 74453031 74453105 -92197191 - L2c LINE L2 -271 3116 3043 6 1153 2629 110 3 5 chrX 74453247 74453639 -92196657 - L1Md_F2 LINE L1 0 6582 6192 6 1153 503 252 78 8 chrX 74453794 74453922 -92196374 - B4A SINE B4 0 292 156 6 1153 515 276 0 70 chrX 74454368 74454524 -92195772 - B4A SINE B4 -129 163 19 6 1153 2134 176 13 19 chrX 74454637 74455013 -92195283 - MTC LTR MaLR -45 376 3 6 1153 661 318 80 29 chrX 74455060 74455262 -92195034 + B4 SINE B4 2 211 -81 6 1153 2211 79 0 0 chrX 74455262 74455552 -92194744 + L1_Mus1 LINE L1 6269 6558 -9 6 1153 661 318 80 29 chrX 74455552 74455624 -92194672 + B4 SINE B4 212 289 -3 6 1153 27391 102 9 14 chrX 74456166 74461166 -92189130 - L1Md_A LINE L1 -486 5397 420 6 1153 545 326 70 33 chrX 74461443 74461713 -92188583 + MER2 DNA MER2_type 2 281 -64 6 1153 688 200 17 0 chrX 74462170 74462290 -92188006 + B1_Mur4 SINE Alu 6 127 -23 6 1153 366 310 46 8 chrX 74462174 74462304 -92187992 + ID_B1 SINE B4 90 224 0 6 1153 343 273 145 41 chrX 74462376 74462521 -92187775 + RSINE1 SINE B4 3 162 -3 6 1153 641 226 29 14 chrX 74462559 74462698 -92187598 + B1F1 SINE Alu 5 145 -4 6 1153 276 338 32 57 chrX 74462564 74462721 -92187575 + B4A SINE B4 95 247 -45 6 1153 207 293 13 13 chrX 74462963 74463039 -92187257 + (TATATG)n Simple_repeat Simple_repeat 3 78 0 6 1153 962 258 41 17 chrX 74463105 74463397 -92186899 - Lx7 LINE L1 -279 7417 7119 6 1153 413 292 59 55 chrX 74464062 74464290 -92186006 + B4A SINE B4 7 269 -23 6 1153 381 22 0 0 chrX 74464290 74464336 -92185960 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1153 413 231 19 19 chrX 74464336 74464356 -92185940 + B4A SINE B4 270 289 -3 6 1153 688 130 18 9 chrX 74464479 74464588 -92185708 + PB1D9 SINE Alu 5 114 -6 6 1153 524 56 14 0 chrX 74464617 74464689 -92185607 + (GA)n Simple_repeat Simple_repeat 2 74 0 6 1153 498 359 77 38 chrX 74465811 74466072 -92184224 + B4A SINE B4 2 272 -20 6 1153 327 146 0 0 chrX 74466497 74466552 -92183744 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1153 500 337 38 50 chrX 74466890 74467233 -92183063 - Lx8 LINE L1 -1 7472 7134 6 1153 1291 126 226 87 chrX 74467617 74467904 -92182392 + ORR1A4 LTR MaLR 3 329 0 6 1153 763 209 19 0 chrX 74468347 74468514 -92181782 + ORR1D1 LTR MaLR 3 182 -202 6 1153 1408 215 74 17 chrX 74468725 74469075 -92181221 + ORR1D1 LTR MaLR 5 374 0 6 1153 410 313 33 88 chrX 74469427 74469609 -92180687 - B4A SINE B4 -120 172 1 6 1153 460 221 79 0 chrX 74469610 74469737 -92180559 + Tigger7 DNA MER2_type 2302 2438 -53 6 1153 1154 210 5 29 chrX 74470376 74470582 -92179714 - B3 SINE B2 -7 209 9 6 1153 272 257 29 0 chrX 74470688 74470758 -92179538 + PB1D10 SINE Alu 33 104 -13 6 1153 28 29 0 0 chrX 74470779 74470814 -92179482 + AT_rich Low_complexity Low_complexity 1 35 0 6 1153 614 62 0 10 chrX 74470855 74470953 -92179343 - L1_Mus3 LINE L1 -7 6631 6535 6 1153 295 307 54 12 chrX 74470968 74471136 -92179160 + L1MC5 LINE L1 6644 6818 -1143 6 1153 30634 65 1 58 chrX 74471583 74475329 -92174967 + L1Md_F2 LINE L1 632 4080 -1803 6 1153 471 49 73 12 chrX 74475329 74475411 -92174885 + L1Md_F3 LINE L1 6498 6584 0 6 1153 30634 55 1 55 chrX 74475411 74476919 -92173377 + L1Md_F2 LINE L1 4081 5586 -297 6 1153 8030 46 3 3 chrX 74476919 74477915 -92172381 + L1Md_F2 LINE L1 5587 6582 0 6 1153 4759 47 0 0 chrX 74477915 74478495 -92171801 + L1Md_F3 LINE L1 6005 6584 0 6 1153 839 212 48 0 chrX 74478641 74478806 -92171490 + MTC LTR MaLR 104 276 -145 6 1153 1183 81 17 0 chrX 74478806 74479034 -92171262 + L1_Mus3 LINE L1 6453 6638 0 6 1153 779 260 43 39 chrX 74479747 74479955 -92170341 + B3 SINE B2 2 210 -6 6 1153 673 70 10 10 chrX 74480013 74480114 -92170182 + (TAGA)n Simple_repeat Simple_repeat 2 102 0 6 1153 407 265 25 8 chrX 74480118 74480236 -92170060 + PB1D9 SINE Alu 1 120 0 6 1153 236 293 10 42 chrX 74480237 74480333 -92169963 + GA-rich Low_complexity Low_complexity 5 97 0 6 1153 2161 164 80 15 chrX 74480556 74480945 -92169351 - MTC LTR MaLR 0 421 8 6 1153 240 88 0 0 chrX 74482325 74482359 -92167937 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 6 1153 500 126 0 11 chrX 74482362 74482450 -92167846 + (GGGA)n Simple_repeat Simple_repeat 4 90 0 6 1153 381 254 73 73 chrX 74482694 74482830 -92167466 - ID_B1 SINE B4 -8 216 81 6 1153 255 31 0 0 chrX 74482855 74482887 -92167409 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 6 1153 281 200 67 0 chrX 74482896 74482956 -92167340 - B3 SINE B2 -95 121 58 6 1153 1271 97 17 0 chrX 74483007 74483183 -92167113 - B2_Mm1t SINE B2 -14 179 1 6 1153 1038 217 15 0 chrX 74483317 74483520 -92166776 + B3 SINE B2 2 207 -9 6 1153 630 274 85 97 chrX 74483791 74484050 -92166246 + B4 SINE B4 37 292 0 6 1153 22 0 0 0 chrX 74485271 74485293 -92165003 + AT_rich Low_complexity Low_complexity 1 22 0 6 1153 225 284 159 0 chrX 74485355 74485443 -92164853 + MT2B LTR ERVL 1 102 -499 6 1153 3449 194 22 9 chrX 74485450 74486140 -92164156 + Lx7 LINE L1 6061 6759 -937 6 1153 306 300 231 0 chrX 74486160 74486290 -92164006 - Lx7 LINE L1 -501 7195 7036 6 1153 3040 197 63 75 chrX 74486349 74487195 -92163101 + Lx7 LINE L1 6842 7677 -19 6 1153 825 249 113 34 chrX 74487267 74487533 -92162763 - Lx7 LINE L1 -606 7090 6804 6 1153 33565 50 2 9 chrX 74487723 74492931 -92157365 + L1Md_A LINE L1 418 5586 -297 6 1153 7972 50 1 6 chrX 74492931 74493920 -92156376 + L1Md_F2 LINE L1 5587 6570 -12 6 1153 814 283 87 0 chrX 74494019 74494203 -92156093 + B4 SINE B4 91 290 -2 6 1153 260 344 47 0 chrX 74495006 74495105 -92155191 + B1F SINE Alu 18 120 0 6 1153 200 244 52 29 chrX 74495184 74495357 -92154939 + (TA)n Simple_repeat Simple_repeat 1 177 0 6 1153 30 69 0 0 chrX 74495420 74495478 -92154818 + AT_rich Low_complexity Low_complexity 1 58 0 6 1153 458 309 8 8 chrX 74495652 74495779 -92154517 - MTEb LTR MaLR -252 127 1 6 1153 450 311 8 0 chrX 74495961 74496080 -92154216 - MER58B DNA MER1_type 0 341 222 6 1153 640 324 113 12 chrX 74496125 74496372 -92153924 + B4A SINE B4 5 276 -16 6 1153 439 216 84 46 chrX 74496458 74496589 -92153707 - MTE2a LTR MaLR 0 379 244 6 1153 439 278 91 31 chrX 74496652 74496832 -92153464 - MTE2a LTR MaLR -151 270 65 6 1153 14929 103 11 4 chrX 74496832 74500000 -92150296 + L1Md_F LINE L1 273 3418 -2465 6 1153 11680 84 2 3 chrX 74500004 74501705 -92148591 + L1_Mm LINE L1 3423 5121 -762 1 1153 8625 63 1 0 chrX 74501703 74502892 -92147404 + L1_Mm LINE L1 3814 5003 -880 2 1153 2100 52 0 0 chrX 74502893 74503163 -92147133 + L1_Mm LINE L1 4844 5113 -770 3 1153 33772 35 1 0 chrX 74503163 74509011 -92141285 + L1Md_T LINE L1 1 5589 -297 4 1153 9034 5 0 0 chrX 74509011 74510007 -92140289 + L1Md_T LINE L1 5590 6585 0 4 1153 4979 61 1 0 chrX 74510017 74510691 -92139605 + L1_Mm LINE L1 4329 5003 -880 5 1153 2100 52 0 0 chrX 74510692 74510962 -92139334 + L1Md_T LINE L1 4844 5113 -770 6 1153 33739 35 1 0 chrX 74510962 74516809 -92133487 + L1Md_T LINE L1 1 5589 -297 7 1153 9013 6 0 0 chrX 74516809 74517805 -92132491 + L1Md_T LINE L1 5590 6585 0 7 1153 3857 41 0 0 chrX 74517812 74518300 -92131996 + L1Md_T LINE L1 5099 5586 -297 6 1153 8453 32 1 0 chrX 74518300 74519295 -92131001 + L1Md_T LINE L1 5587 6582 0 6 1153 25 31 0 0 chrX 74519324 74519356 -92130940 + AT_rich Low_complexity Low_complexity 1 32 0 8 1153 383 271 41 59 chrX 74519387 74519426 -92130870 + L1Md_F2 LINE L1 5118 5158 -988 9 1153 7869 47 1 14 chrX 74519426 74520423 -92129873 + L1Md_F2 LINE L1 5588 6571 -11 1 1153 3415 60 0 7 chrX 74520423 74520886 -92129410 + L1Md_F2 LINE L1 5129 5586 -297 9 1153 6520 77 74 3 chrX 74520886 74521815 -92128481 + L1Md_F2 LINE L1 5587 6581 -1 9 1153 280 276 48 24 chrX 74521824 74521950 -92128346 - MTC LTR MaLR -292 129 1 1 1153 390 297 35 52 chrX 74521951 74522125 -92128171 + L1MC1 LINE L1 5908 6078 -255 1 1153 899 288 6 15 chrX 74522310 74522645 -92127651 + L1MB3 LINE L1 5592 5923 -260 1 1153 1151 266 59 45 chrX 74522650 74523004 -92127292 + ORR1E LTR MaLR 1 359 0 1 1153 225 298 116 23 chrX 74523037 74523209 -92127087 + L1MB3 LINE L1 5981 6168 -3 1 1153 862 311 17 17 chrX 74523375 74523663 -92126633 - B4 SINE B4 -2 290 3 1 1153 492 356 93 37 chrX 74524709 74525030 -92125266 + MLT1F LTR MaLR 194 532 -16 1 1153 785 169 7 0 chrX 74525117 74525259 -92125037 - URR1B DNA MER1_type 0 225 83 1 1153 410 269 37 43 chrX 74525259 74525270 -92125026 + CYRA11_Mm Unknown Y-chromosome 228 322 -295 1 1153 298 353 156 0 chrX 74525428 74525595 -92124701 + MLT1F LTR MaLR 175 367 -181 1 1153 326 272 25 0 chrX 74525611 74525692 -92124604 + Lx8 LINE L1 6203 6285 -1188 2 1153 1340 258 31 24 chrX 74525690 74526071 -92124225 + Lx8 LINE L1 6424 6807 -666 2 1153 3135 172 102 13 chrX 74526071 74526812 -92123484 - RMER13B LTR ERVK 0 908 13 2 1153 351 0 0 0 chrX 74526831 74526870 -92123426 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1153 1998 91 0 10 chrX 74526871 74527159 -92123137 - L1Md_F2 LINE L1 -1 6581 6297 2 1153 1165 251 38 3 chrX 74527183 74527499 -92122797 + Lx8 LINE L1 6801 7127 -346 2 1153 481 251 62 61 chrX 74527641 74527806 -92122490 + B4 SINE B4 84 249 -43 2 1153 3234 182 118 28 chrX 74527955 74528162 -92122134 - RLTR40 LTR ERVK -23 794 570 2 1153 369 0 0 0 chrX 74528162 74528203 -92122093 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1153 3234 182 118 28 chrX 74528203 74528723 -92121573 - RLTR40 LTR ERVK -248 569 1 2 1153 266 312 0 21 chrX 74528724 74528819 -92121477 + (CATA)n Simple_repeat Simple_repeat 4 96 0 2 1153 304 262 140 19 chrX 74528836 74529143 -92121153 + HAL1b LINE L1 993 1336 -673 2 1153 400 271 47 12 chrX 74529397 74529483 -92120813 + B4A SINE B4 202 290 -2 2 1153 242 372 86 52 chrX 74529836 74530046 -92120250 - MTEb LTR MaLR -102 277 61 2 1153 794 171 57 53 chrX 74530507 74530754 -92119542 - Lx7 LINE L1 0 7696 7449 3 1153 2125 104 3 62 chrX 74530802 74531141 -92119155 + ORR1A2 LTR MaLR 1 319 -8 3 1153 8292 203 32 16 chrX 74531146 74531305 -92118991 - Lx7 LINE L1 -279 7417 7253 3 1153 2093 158 10 38 chrX 74531305 74531700 -92118596 - ORR1C2 LTR MaLR 0 384 1 3 1153 8292 191 40 19 chrX 74531700 74534155 -92116141 - Lx7 LINE L1 -444 7252 4746 3 1153 1918 168 5 0 chrX 74534154 74534523 -92115773 + L1_Mur3 LINE L1 4152 4522 -1358 3 1153 1123 199 68 26 chrX 74534519 74534783 -92115513 + Lx7 LINE L1 7085 7359 -337 3 1153 611 226 6 0 chrX 74534784 74534943 -92115353 + CT-rich Low_complexity Low_complexity 2 161 0 3 1153 189 0 0 0 chrX 74535519 74535540 -92114756 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1153 976 92 13 7 chrX 74536197 74536351 -92113945 + (TTTC)n Simple_repeat Simple_repeat 4 158 0 3 1153 297 0 0 0 chrX 74536351 74536383 -92113913 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 3 1153 242 277 83 8 chrX 74536385 74536460 -92113836 + Lx7 LINE L1 7364 7448 -248 3 1153 303 28 0 0 chrX 74536460 74536496 -92113800 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1153 242 277 83 8 chrX 74536496 74536519 -92113777 + Lx7 LINE L1 7449 7471 -225 3 1153 218 56 28 0 chrX 74536519 74536555 -92113741 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 4 1153 242 277 83 8 chrX 74536555 74536575 -92113721 + Lx7 LINE L1 7472 7490 -206 3 1153 204 40 0 0 chrX 74536578 74536603 -92113693 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 4 1153 288 302 75 94 chrX 74536641 74536853 -92113443 - RLTR17 LTR ERVK -302 390 183 4 1153 531 238 7 7 chrX 74536861 74536979 -92113317 - Lx7 LINE L1 -1138 4742 4626 3 1153 471 35 0 0 chrX 74536979 74537036 -92113260 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1153 531 238 7 7 chrX 74537036 74537061 -92113235 - Lx7 LINE L1 -1255 4625 4600 3 1153 264 242 7 0 chrX 74537061 74537135 -92113161 - Lx7 LINE L1 -2343 3543 3461 3 1153 2566 153 159 18 chrX 74537140 74537699 -92112597 + Lx5 LINE L1 6410 7047 -3 4 1153 468 0 0 0 chrX 74539905 74539957 -92110339 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1153 1175 159 10 89 chrX 74540576 74540879 -92109417 - Lx7 LINE L1 0 7696 7418 4 1153 8934 170 61 42 chrX 74540929 74542317 -92107979 - Lx7 LINE L1 -2414 3466 2070 3 1153 195 42 0 0 chrX 74542317 74542341 -92107955 + (TGG)n Simple_repeat Simple_repeat 3 26 0 4 1153 8934 204 43 31 chrX 74542341 74542584 -92107712 - Lx7 LINE L1 -3811 2069 1811 3 1153 276 115 18 88 chrX 74542584 74542641 -92107655 - U2 snRNA snRNA -135 53 1 4 1153 8934 204 43 31 chrX 74542641 74543711 -92106585 - Lx7 LINE L1 -3811 1810 667 3 1153 308 156 0 0 chrX 74543716 74543761 -92106535 + B1_Mur2 SINE Alu 73 117 -32 4 1153 344 119 0 17 chrX 74543782 74543842 -92106454 + (GGGGA)n Simple_repeat Simple_repeat 5 63 0 5 1153 1030 276 74 33 chrX 74544389 74544753 -92105543 + MTE2a LTR MaLR 1 379 0 5 1153 488 88 12 0 chrX 74544760 74544840 -92105456 + Lx LINE L1 6574 6654 0 5 1153 763 234 83 15 chrX 74545556 74545860 -92104436 - ORR1D2 LTR MaLR -5 365 1 5 1153 1513 210 48 6 chrX 74545860 74546176 -92104120 - ORR1D2-int LTR MaLR 0 1370 1042 5 1153 425 249 2 8 chrX 74546174 74546297 -92103999 - ORR1D2 LTR MaLR -235 124 1 5 1153 288 283 0 0 chrX 74546819 74546879 -92103417 - ID4_ SINE ID -20 63 4 5 1153 2594 161 63 22 chrX 74547108 74547596 -92102700 + RLTR28 LTR ERVL 1 508 -16 5 1153 425 270 216 71 chrX 74547692 74547947 -92102349 - B4A SINE B4 0 292 1 5 1153 237 288 161 128 chrX 74548340 74548551 -92101745 - MER20 DNA MER1_type 0 219 2 5 1153 192 432 16 16 chrX 74548594 74548721 -92101575 + MER5B DNA MER1_type 18 144 -34 5 1153 2176 230 72 51 chrX 74548745 74548864 -92101432 + RCHARR1 DNA MER1_type 6 124 -850 6 1153 1490 69 23 18 chrX 74548864 74549085 -92101211 + L1Md_F2 LINE L1 6360 6581 -1 6 1153 2176 230 72 51 chrX 74549085 74549455 -92100841 + RCHARR1 DNA MER1_type 125 487 -487 6 1153 1271 71 21 42 chrX 74549455 74549645 -92100651 + B2_Mm2 SINE B2 1 186 -9 6 1153 2176 230 72 51 chrX 74549645 74549740 -92100556 + RCHARR1 DNA MER1_type 488 603 -371 6 1153 410 217 152 0 chrX 74549740 74549832 -92100464 + B1_Mur1 SINE Alu 1 106 -43 6 1153 4684 164 35 61 chrX 74549832 74551020 -92099276 + L1_Rod LINE L1 2126 3282 -2565 6 1153 950 160 244 3 chrX 74551040 74551213 -92099083 + Lx9 LINE L1 7293 7476 -168 6 1153 189 0 0 0 chrX 74551213 74551234 -92099062 + (TA)n Simple_repeat Simple_repeat 1 21 0 6 1153 950 160 244 3 chrX 74551234 74551343 -92098953 + Lx9 LINE L1 7477 7642 -2 6 1153 1999 179 26 7 chrX 74551349 74551770 -92098526 - Lx9 LINE L1 -427 7217 6789 6 1153 841 214 54 131 chrX 74551767 74552196 -92098100 + Lx9 LINE L1 7249 7644 0 6 1153 834 228 0 0 chrX 74552359 74552526 -92097770 + Lx7 LINE L1 6815 6981 -715 6 1153 207 88 0 0 chrX 74552826 74552860 -92097436 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1153 1445 140 9 0 chrX 74553369 74553591 -92096705 - URR1A DNA MER1_type -2 224 1 7 1153 186 71 0 0 chrX 74553630 74553658 -92096638 + (TTTTTG)n Simple_repeat Simple_repeat 4 31 0 7 1153 9415 78 37 4 chrX 74553667 74555140 -92095156 - Lx3_Mus LINE L1 -8 7001 5483 7 1153 351 328 23 53 chrX 74555459 74555515 -92094781 - B1F SINE Alu -17 132 83 7 1153 1546 55 0 0 chrX 74555515 74555716 -92094580 - L1Md_F2 LINE L1 -12 6570 6370 7 1153 356 284 0 1 chrX 74555716 74555791 -92094505 - PB1D10 SINE Alu -67 82 5 7 1153 622 309 65 36 chrX 74556274 74556408 -92093888 + B4A SINE B4 2 142 -150 7 1153 300 111 0 0 chrX 74556408 74556453 -92093843 + (CCA)n Simple_repeat Simple_repeat 2 46 0 7 1153 622 309 65 36 chrX 74556453 74556593 -92093703 + B4A SINE B4 143 283 -9 7 1153 330 286 99 0 chrX 74556630 74556721 -92093575 + B4A SINE B4 187 286 -6 7 1153 553 284 16 0 chrX 74556798 74556925 -92093371 + ID_B1 SINE B4 91 219 -5 7 1153 208 245 0 19 chrX 74557038 74557092 -92093204 + GA-rich Low_complexity Low_complexity 3 55 0 7 1153 827 337 29 40 chrX 74557514 74557792 -92092504 + B4A SINE B4 1 275 -17 8 1153 223 250 0 32 chrX 74557805 74557867 -92092429 + (CATA)n Simple_repeat Simple_repeat 3 62 0 8 1153 720 253 69 37 chrX 74557907 74558096 -92092200 + B3A SINE B2 1 195 -3 8 1153 405 110 0 0 chrX 74558768 74558841 -92091455 + (T)n Simple_repeat Simple_repeat 1 73 0 8 1153 578 150 62 0 chrX 74559672 74559785 -92090511 + Lx9 LINE L1 7519 7638 -6 8 1153 1596 240 43 27 chrX 74560101 74560470 -92089826 + MTE2a LTR MaLR 3 377 -2 8 1153 364 265 0 30 chrX 74560545 74560646 -92089650 + MTD LTR MaLR 5 102 -317 8 1153 36434 51 0 3 chrX 74560646 74566456 -92083840 + L1Md_T LINE L1 1 5589 -297 8 1153 9039 32 0 0 chrX 74566456 74567452 -92082844 + L1Md_T LINE L1 5590 6585 0 8 1153 1808 198 11 40 chrX 74567462 74567835 -92082461 + MTD LTR MaLR 50 411 -8 8 1153 640 326 32 5 chrX 74568164 74568352 -92081944 + B3A SINE B2 2 194 -4 8 1153 820 257 113 0 chrX 74568520 74568839 -92081457 + MTE2b LTR MaLR 15 369 -10 9 1153 252 0 0 0 chrX 74568840 74568868 -92081428 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 9 1153 327 326 73 7 chrX 74569845 74569981 -92080315 + B1F SINE Alu 5 149 0 9 1153 375 23 0 0 chrX 74570148 74570192 -92080104 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 1153 440 241 211 33 chrX 74570238 74570577 -92079719 + L1MD3 LINE L1 7158 7701 -294 9 1153 702 245 0 41 chrX 74571149 74571294 -92079002 + B1_Mur1 SINE Alu 5 143 -6 9 1153 1105 116 0 13 chrX 74571304 74571453 -92078843 + B1_Mus1 SINE Alu 2 148 0 9 1153 351 320 78 0 chrX 74571471 74571574 -92078722 + PB1D10 SINE Alu 7 117 0 9 1153 701 260 153 11 chrX 74571577 74571760 -92078536 + B3 SINE B2 1 209 -7 9 1153 201 121 0 0 chrX 74571806 74571839 -92078457 + (GGGA)n Simple_repeat Simple_repeat 4 36 0 9 1153 774 301 73 3 chrX 74571986 74572289 -92078007 + L1MA4 LINE L1 5616 5939 -361 1 1153 429 70 0 0 chrX 74572836 74572893 -92077403 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1153 694 305 23 81 chrX 74573133 74573440 -92076856 + B4A SINE B4 1 289 -3 1 1153 926 178 198 17 chrX 74573636 74573813 -92076483 - B3 SINE B2 -4 212 4 1 1153 268 250 97 0 chrX 74573946 74574018 -92076278 - ID4_ SINE ID -4 79 1 1 1153 292 182 55 0 chrX 74574019 74574090 -92076206 - PB1D10 SINE Alu -5 122 49 1 1153 682 187 74 7 chrX 74574132 74574267 -92076029 + B1_Mur1 SINE Alu 1 144 -5 1 1153 237 33 0 0 chrX 74574401 74574431 -92075865 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1 1153 1225 74 0 0 chrX 74574433 74574581 -92075715 - B1_Mus1 SINE Alu 0 148 1 1 1153 189 147 0 0 chrX 74574642 74574676 -92075620 + (TCC)n Simple_repeat Simple_repeat 2 35 0 1 1153 848 175 184 60 chrX 74574680 74574996 -92075300 - Lx7 LINE L1 -45 7651 7297 1 1153 524 313 52 26 chrX 74575900 74576133 -92074163 - MER2 DNA MER2_type 0 345 107 1 1153 867 322 17 4 chrX 74576529 74576766 -92073530 - B4 SINE B4 -18 274 35 1 1153 763 262 188 62 chrX 74576773 74577062 -92073234 + MTE2b LTR MaLR 3 326 -53 1 1153 909 107 0 0 chrX 74577062 74577202 -92073094 + (TTCC)n Simple_repeat Simple_repeat 4 143 0 1 1153 763 262 188 62 chrX 74577202 74577237 -92073059 + MTE2b LTR MaLR 327 368 -11 1 1153 1324 117 129 4 chrX 74577956 74578197 -92072099 + RLTR44E LTR ERVK 1 271 -181 1 1153 3339 70 136 0 chrX 74578197 74578682 -92071614 + RLTR44-int LTR ERVK 9 559 -2253 1 1153 4370 68 3 57 chrX 74578685 74579304 -92070992 + RLTR44-int LTR ERVK 815 1400 -1412 1 144 10420 47 2 2 chrX 74579300 74580538 -92069758 + RLTR44-int LTR ERVK 1575 2812 0 1 1154 1579 88 31 4 chrX 74580538 74580767 -92069529 + RLTR44E LTR ERVK 1 235 -217 1 1154 38021 49 19 4 chrX 74580852 74587126 -92063170 - L1Md_A LINE L1 0 6582 204 1 1154 355 52 0 33 chrX 74587184 74587244 -92063052 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 1 1154 2708 79 0 9 chrX 74587250 74587596 -92062700 - L1_Mus1 LINE L1 0 6567 6225 1 1154 279 0 0 0 chrX 74587633 74587664 -92062632 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 1154 953 255 5 5 chrX 74587665 74587862 -92062434 - B3 SINE B2 -19 197 1 1 1154 5640 52 2 16 chrX 74588328 74589324 -92060972 + L1Md_F3 LINE L1 1 752 -5972 1 1154 8258 9 0 0 chrX 74589313 74590226 -92060070 + L1Md_A LINE L1 4674 5586 -297 1 1154 9593 4 0 0 chrX 74590226 74591222 -92059074 + L1Md_A LINE L1 5587 6582 0 1 1154 8505 117 145 2 chrX 74591225 74593050 -92057246 + L1Md_F3 LINE L1 3125 5581 -299 1 1154 7900 62 7 40 chrX 74593050 74594081 -92056215 + L1Md_F3 LINE L1 5587 6583 -1 1 1154 511 265 25 17 chrX 74594319 74594438 -92055858 + B4 SINE B4 114 233 -59 1 1154 483 241 95 0 chrX 74594471 74594629 -92055667 - MER2 DNA MER2_type -25 320 148 1 1154 357 316 16 63 chrX 74594636 74594820 -92055476 + RSINE1 SINE B4 5 174 -118 1 1154 276 273 91 0 chrX 74594890 74594967 -92055329 + RSINE1 SINE B4 78 161 -4 1 1154 429 54 0 0 chrX 74594969 74595025 -92055271 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1154 370 317 81 8 chrX 74595073 74595197 -92055099 - MER2 DNA MER2_type -205 140 8 1 1154 826 204 0 7 chrX 74595256 74595394 -92054902 - B1_Mur1 SINE Alu -6 143 7 1 1154 3510 43 0 2 chrX 74595709 74596128 -92054168 - L1_Mus1 LINE L1 -513 6054 5637 1 1154 569 81 0 0 chrX 74596126 74596200 -92054096 + L1_Mus1 LINE L1 6053 6126 -441 1 1154 1595 67 0 0 chrX 74596201 74596396 -92053900 + L1_Mus1 LINE L1 6290 6484 -83 1 1154 239 188 0 0 chrX 74597125 74597173 -92053123 + MER45B DNA Tip100 993 1040 0 1 1154 311 158 113 7 chrX 74597590 74597687 -92052609 - Lx7 LINE L1 -16 7680 7601 1 1154 576 203 57 57 chrX 74597961 74598102 -92052194 + B1_Mur4 SINE Alu 10 150 0 1 1154 1494 181 0 30 chrX 74598113 74598380 -92051916 + Lx4B LINE L1 6798 7056 -2 1 1154 296 197 0 0 chrX 74598622 74598683 -92051613 - B3 SINE B2 0 216 156 1 1154 429 171 0 0 chrX 74598783 74598871 -92051425 + (TG)n Simple_repeat Simple_repeat 1 88 0 1 1154 1227 294 10 21 chrX 74598885 74599132 -92051164 - B4A SINE B4 -6 286 40 1 1154 1767 195 67 93 chrX 74599132 74599562 -92050734 + MTD LTR MaLR 1 419 0 1 1154 1227 294 10 21 chrX 74599562 74599602 -92050694 - B4A SINE B4 -253 39 2 1 1154 706 219 23 0 chrX 74600469 74600597 -92049699 + B1_Mus1 SINE Alu 3 133 -15 1 1154 230 116 0 23 chrX 74600598 74600642 -92049654 + (GGAGA)n Simple_repeat Simple_repeat 4 46 0 1 1154 984 229 62 5 chrX 74600728 74600939 -92049357 + ID_B1 SINE B4 1 223 -1 1 1154 186 43 0 0 chrX 74600941 74600964 -92049332 + (GGA)n Simple_repeat Simple_repeat 3 25 0 1 1154 294 360 142 14 chrX 74600990 74601131 -92049165 - MLT1G3 LTR MaLR -210 385 227 1 1154 530 180 17 11 chrX 74602078 74602252 -92048044 + (TAGA)n Simple_repeat Simple_repeat 3 177 0 1 1154 604 325 0 30 chrX 74602291 74602456 -92047840 + B3A SINE B2 3 162 -36 1 1154 363 106 0 0 chrX 74602467 74602533 -92047763 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 1154 441 0 0 0 chrX 74602533 74602581 -92047715 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 1154 4970 185 75 12 chrX 74602597 74603572 -92046724 + Lx9 LINE L1 6603 7638 -6 1 1154 8203 143 19 2 chrX 74603569 74605171 -92045125 + Lx4B LINE L1 5349 6982 -76 1 1154 1310 200 57 18 chrX 74605171 74605223 -92045073 + MTC LTR MaLR 131 190 -231 1 1154 189 74 0 0 chrX 74605223 74605250 -92045046 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 1 1154 1310 200 57 18 chrX 74605250 74605477 -92044819 + MTC LTR MaLR 191 421 0 1 1154 242 247 32 0 chrX 74605482 74605643 -92044653 + (TAGA)n Simple_repeat Simple_repeat 1 166 0 1 1154 899 281 21 70 chrX 74607226 74607434 -92042862 + B4A SINE B4 12 213 -79 1 1154 252 0 0 0 chrX 74607434 74607462 -92042834 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 1 1154 1154 121 52 6 chrX 74607463 74607637 -92042659 + B2_Mm2 SINE B2 1 182 -13 1 1154 899 281 21 70 chrX 74607637 74607713 -92042583 + B4A SINE B4 214 284 -8 1 1154 806 261 53 32 chrX 74607890 74608080 -92042216 + ID_B1 SINE B4 2 195 -29 1 1154 1066 257 71 4 chrX 74608618 74608872 -92041424 - B4 SINE B4 -16 276 6 1 1154 1700 247 25 3 chrX 74609308 74609670 -92040626 + ORR1D2 LTR MaLR 1 370 0 1 1154 227 371 11 0 chrX 74610292 74610381 -92039915 - BC1_Mm scRNA scRNA -61 91 2 1 1154 961 281 117 4 chrX 74610512 74610769 -92039527 - B4A SINE B4 -5 287 2 1 1154 21 0 0 0 chrX 74611408 74611429 -92038867 + AT_rich Low_complexity Low_complexity 1 21 0 1 1154 477 226 125 76 chrX 74611459 74611603 -92038693 - B4A SINE B4 -13 279 129 1 1154 309 89 0 0 chrX 74611811 74611856 -92038440 + (TCC)n Simple_repeat Simple_repeat 2 46 0 1 1154 338 271 134 10 chrX 74612195 74612292 -92038004 - B4A SINE B4 -181 111 3 1 1154 250 346 42 24 chrX 74612303 74612490 -92037806 - MIR SINE MIR -68 194 2 1 1154 269 353 107 0 chrX 74612503 74612653 -92037643 + MER58A DNA MER1_type 1 166 -58 1 1154 389 241 0 128 chrX 74612690 74612823 -92037473 + B3A SINE B2 83 198 0 1 1154 1073 114 0 0 chrX 74612826 74612966 -92037330 + B1_Mus1 SINE Alu 1 140 -8 1 1154 459 0 0 0 chrX 74612966 74613017 -92037279 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 1154 257 286 0 87 chrX 74613075 74613098 -92037198 + ID4_ SINE ID 18 35 -48 1 1154 1983 213 76 18 chrX 74613098 74613494 -92036802 - MTD LTR MaLR 0 419 1 1 1154 257 286 0 87 chrX 74613494 74613539 -92036757 + ID4_ SINE ID 36 80 -3 1 1154 674 254 0 22 chrX 74613687 74613824 -92036472 + RSINE1 SINE B4 8 141 -24 1 1154 270 0 0 0 chrX 74613826 74613856 -92036440 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1154 4202 52 6 2 chrX 74613875 74614390 -92035906 - L1Md_F2 LINE L1 -141 6441 5925 1 1154 771 128 28 73 chrX 74614390 74614567 -92035729 + L1Md_F3 LINE L1 6416 6584 0 1 1154 186 43 0 0 chrX 74614887 74614910 -92035386 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1154 472 276 198 8 chrX 74615744 74615982 -92034314 - B4A SINE B4 -8 284 1 1 1154 187 79 26 26 chrX 74616576 74616615 -92033681 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 1 1154 786 279 61 48 chrX 74616795 74617020 -92033276 + B4 SINE B4 1 228 -64 1 1154 782 244 39 17 chrX 74617020 74617199 -92033097 + B3A SINE B2 1 183 -15 1 1154 865 283 5 41 chrX 74617252 74617473 -92032823 - B3 SINE B2 -3 213 1 1 1154 298 169 117 0 chrX 74617698 74617775 -92032521 + MTEb LTR MaLR 290 375 -4 1 1154 1264 71 12 0 chrX 74617878 74618048 -92032248 + B2_Mm1t SINE B2 1 172 -21 1 1154 8253 64 6 2 chrX 74618048 74619075 -92031221 - L1_Mus3 LINE L1 -20 6618 5588 1 1154 3205 137 18 2 chrX 74619099 74619610 -92030686 + L1_Mm LINE L1 5015 5533 -350 1 1154 455 291 9 26 chrX 74619613 74619726 -92030570 - PB1D10 SINE Alu -6 111 1 1 1154 546 310 14 0 chrX 74619799 74619941 -92030355 - B1_Mur1 SINE Alu -5 144 1 1 1154 219 69 0 0 chrX 74620550 74620579 -92029717 + (TCTCCC)n Simple_repeat Simple_repeat 3 31 0 1 1154 792 282 92 12 chrX 74620654 74620905 -92029391 - B4A SINE B4 -18 274 4 1 1154 22 35 0 0 chrX 74621073 74621102 -92029194 + AT_rich Low_complexity Low_complexity 1 29 0 1 1154 734 239 36 7 chrX 74621110 74621249 -92029047 - RSINE1 SINE B4 -11 154 12 1 1154 411 224 92 18 chrX 74621253 74621362 -92028934 - PB1D10 SINE Alu 0 117 1 1 1154 813 227 50 10 chrX 74621945 74622145 -92028151 + ID_B1 SINE B4 17 224 0 1 1154 203 296 19 0 chrX 74622145 74622199 -92028097 + G-rich Low_complexity Low_complexity 5 59 0 1 1154 1070 121 11 0 chrX 74622199 74622373 -92027923 + (GGAAA)n Simple_repeat Simple_repeat 5 180 0 1 1154 229 333 13 0 chrX 74623072 74623150 -92027146 + B4A SINE B4 8 86 -206 1 1154 272 218 154 0 chrX 74623174 74623252 -92027044 + B1F1 SINE Alu 55 144 -5 1 1154 1040 257 0 5 chrX 74623262 74623477 -92026819 + ID_B1 SINE B4 11 224 0 1 1154 323 289 4 49 chrX 74623491 74623584 -92026712 - PB1D10 SINE Alu -54 95 4 1 1154 742 296 7 8 chrX 74623783 74623985 -92026311 - B3A SINE B2 0 216 17 1 1154 248 349 17 17 chrX 74624955 74625209 -92025087 + (CATATA)n Simple_repeat Simple_repeat 1 254 0 1 1154 657 256 55 101 chrX 74625329 74625388 -92024908 + ID SINE ID 1 57 -167 1 1154 1169 79 0 0 chrX 74625388 74625528 -92024768 + B1_Mus2 SINE Alu 2 141 -6 2 1154 1491 0 0 18 chrX 74625529 74625748 -92024548 + (GAA)n Simple_repeat Simple_repeat 1 214 0 2 1154 657 256 55 101 chrX 74625748 74625902 -92024394 + ID_B1 SINE B4 58 206 -18 1 1154 401 223 74 32 chrX 74626271 74626392 -92023904 + L1MB7 LINE L1 5674 5791 -383 2 1154 408 88 0 0 chrX 74626392 74626449 -92023847 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 1154 401 241 118 27 chrX 74626449 74626523 -92023773 + L1MB7 LINE L1 5791 5896 -284 2 1154 333 0 0 0 chrX 74626523 74626560 -92023736 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1154 398 232 47 35 chrX 74626560 74626689 -92023607 + L1MB7 LINE L1 5897 6034 -140 2 1154 4489 63 7 2 chrX 74626707 74627248 -92023048 + L1Md_F2 LINE L1 6036 6579 -3 2 1154 213 175 17 17 chrX 74627511 74627569 -92022727 + ID4 SINE ID 2 59 -24 2 1154 657 271 126 41 chrX 74627611 74627880 -92022416 + B4A SINE B4 1 292 0 2 1154 8387 43 2 1 chrX 74627986 74629421 -92020875 - L1Md_F2 LINE L1 0 6582 5146 2 1154 8985 55 4 3 chrX 74629418 74631214 -92019082 - L1Md_F2 LINE L1 -12 6570 4771 2 1154 686 145 0 8 chrX 74631599 74631724 -92018572 + CT-rich Low_complexity Low_complexity 1 124 0 2 1154 624 291 14 0 chrX 74631724 74631865 -92018431 - ID_B1 SINE B4 -2 222 80 2 1154 912 95 0 0 chrX 74631990 74632127 -92018169 + (TG)n Simple_repeat Simple_repeat 2 138 0 2 1154 1087 246 62 29 chrX 74632133 74632376 -92017920 - B4 SINE B4 -19 273 23 2 1154 2604 94 5 3 chrX 74633241 74633615 -92016681 - L1_Mm LINE L1 -474 5409 5035 2 1154 7851 70 0 2 chrX 74633612 74634636 -92015660 + L1_Mus1 LINE L1 5546 6567 0 2 1154 485 118 57 38 chrX 74634708 74634814 -92015482 - L1_Mus3 LINE L1 0 6638 6531 2 1154 21 36 0 0 chrX 74635029 74635057 -92015239 + AT_rich Low_complexity Low_complexity 1 28 0 2 1154 234 246 0 97 chrX 74635788 74635860 -92014436 + tRNA-Ala-GCY_ tRNA tRNA 3 67 -8 2 1154 495 247 9 14 chrX 74635870 74636093 -92014203 + GA-rich Low_complexity Low_complexity 1 221 0 2 1154 782 302 28 0 chrX 74636451 74636663 -92013633 + ID_B1 SINE B4 4 221 -3 2 1154 560 239 17 8 chrX 74636692 74636810 -92013486 + RSINE1 SINE B4 11 129 -36 2 1154 333 0 0 0 chrX 74636827 74636864 -92013432 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1154 350 147 15 0 chrX 74637727 74637795 -92012501 + (TATG)n Simple_repeat Simple_repeat 4 72 0 2 1154 340 350 59 64 chrX 74638095 74638115 -92012181 + B4A SINE B4 2 20 -272 2 1154 1487 249 53 50 chrX 74638115 74638326 -92011970 - MTD LTR MaLR 0 419 213 2 1154 1085 195 34 0 chrX 74638326 74638531 -92011765 - B3 SINE B2 0 216 5 2 1154 1487 249 53 50 chrX 74638531 74638737 -92011559 - MTD LTR MaLR -207 212 1 2 1154 340 350 59 64 chrX 74638737 74638811 -92011485 + B4A SINE B4 21 102 -190 2 1154 1755 220 15 78 chrX 74638811 74639013 -92011283 + ORR1D1 LTR MaLR 1 181 -193 2 1154 207 0 0 0 chrX 74639013 74639036 -92011260 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 2 1154 578 14 14 0 chrX 74639043 74639114 -92011182 + (TC)n Simple_repeat Simple_repeat 1 72 0 2 1154 1755 220 15 78 chrX 74639114 74639298 -92010998 + ORR1D1 LTR MaLR 182 370 -4 2 1154 340 350 59 64 chrX 74639298 74639422 -92010874 + B4A SINE B4 103 220 -72 2 1154 630 283 71 13 chrX 74639435 74639589 -92010707 + RSINE1 SINE B4 3 165 0 2 1154 1085 266 47 10 chrX 74639975 74640271 -92010025 - ORR1E LTR MaLR 0 359 53 2 1154 180 0 0 0 chrX 74640583 74640603 -92009693 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1154 1715 37 0 0 chrX 74640613 74640802 -92009494 - B2_Mm1t SINE B2 -3 190 2 2 1154 1710 71 0 0 chrX 74640842 74641054 -92009242 + L1Md_T LINE L1 6371 6582 0 2 1154 567 327 19 0 chrX 74641235 74641391 -92008905 + ID_B1 SINE B4 41 199 -25 2 1154 192 77 0 0 chrX 74641522 74641548 -92008748 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1154 668 233 0 0 chrX 74641553 74641673 -92008623 + B1_Mur1 SINE Alu 9 128 -21 2 1154 485 120 0 12 chrX 74641673 74641757 -92008539 + (GGA)n Simple_repeat Simple_repeat 3 85 0 2 1154 2242 110 62 0 chrX 74641830 74642138 -92008158 - ORR1A2 LTR MaLR 0 327 1 2 1154 516 278 14 36 chrX 74642152 74642290 -92008006 + RSINE1 SINE B4 2 136 -29 2 1154 180 163 0 0 chrX 74642294 74642337 -92007959 + (CAGAGA)n Simple_repeat Simple_repeat 6 48 0 2 1154 22 35 0 0 chrX 74642337 74642366 -92007930 + AT_rich Low_complexity Low_complexity 1 29 0 2 1154 311 319 32 104 chrX 74642753 74642907 -92007389 - B4A SINE B4 -146 146 4 2 1154 36216 36 0 0 chrX 74643098 74648755 -92001541 + L1Md_T LINE L1 1 5589 -297 2 1154 9579 6 0 0 chrX 74648755 74649777 -92000519 + L1Md_T LINE L1 5590 6585 0 2 1154 534 285 143 16 chrX 74650266 74650455 -91999841 + B3 SINE B2 4 216 0 2 1154 458 280 99 52 chrX 74650476 74650668 -91999628 - B3 SINE B2 -15 201 1 2 1154 309 226 12 23 chrX 74651320 74651406 -91998890 + CT-rich Low_complexity Low_complexity 4 88 0 2 1154 604 300 142 55 chrX 74651416 74651705 -91998591 - MTD LTR MaLR -105 314 1 2 1154 1359 94 5 45 chrX 74651844 74652045 -91998251 + B2_Mm1t SINE B2 1 193 0 2 1154 196 294 0 19 chrX 74652110 74652162 -91998134 + MIR3 SINE MIR 111 161 -47 2 1154 522 325 8 0 chrX 74652247 74652370 -91997926 + B3A SINE B2 45 168 -30 2 1154 1962 190 16 49 chrX 74652370 74652757 -91997539 + ORR1D1 LTR MaLR 1 374 0 2 1154 590 274 0 0 chrX 74653005 74653122 -91997174 - RSINE1 SINE B4 -45 120 4 2 1154 246 132 0 0 chrX 74654053 74654106 -91996190 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 1154 890 53 0 17 chrX 74654162 74654277 -91996019 + B1_Mus2 SINE Alu 34 146 -1 2 1154 728 278 102 38 chrX 74654317 74654582 -91995714 + B4A SINE B4 11 292 0 2 1154 776 279 92 29 chrX 74655864 74656137 -91994159 + B4A SINE B4 3 292 0 2 1154 1044 230 18 41 chrX 74656704 74656922 -91993374 + B3 SINE B2 3 215 -1 2 1154 251 333 0 0 chrX 74657252 74657312 -91992984 + ID4_ SINE ID 24 83 0 2 1154 587 262 68 51 chrX 74657334 74657511 -91992785 + B3A SINE B2 16 195 -3 2 1154 212 179 26 0 chrX 74657554 74657593 -91992703 + ID4 SINE ID 1 40 -43 2 1154 417 290 97 18 chrX 74657728 74657893 -91992403 + MLT1F LTR MaLR 370 547 -1 2 1154 495 33 0 0 chrX 74658395 74658456 -91991840 + (GGAA)n Simple_repeat Simple_repeat 2 62 0 2 1154 396 0 0 0 chrX 74658772 74658816 -91991480 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2 1154 237 83 0 0 chrX 74659079 74659115 -91991181 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1154 678 25 0 0 chrX 74659115 74659194 -91991102 + (GA)n Simple_repeat Simple_repeat 1 80 0 2 1154 1054 240 9 35 chrX 74659257 74659486 -91990810 - ID_B1 SINE B4 -1 223 1 2 1154 200 184 20 0 chrX 74659894 74659943 -91990353 + GA-rich Low_complexity Low_complexity 3 52 0 2 1154 358 155 17 0 chrX 74659976 74660034 -91990262 + B3A SINE B2 56 114 -84 2 1154 192 77 0 0 chrX 74660059 74660085 -91990211 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1154 2203 140 16 16 chrX 74660353 74660716 -91989580 - ORR1B1 LTR MaLR 0 394 32 2 1154 545 315 20 27 chrX 74660733 74660880 -91989416 - B3A SINE B2 0 198 53 2 1154 238 282 25 101 chrX 74660888 74660909 -91989387 + ID4 SINE ID 11 32 -51 2 1154 1332 84 62 0 chrX 74660909 74661087 -91989209 - B2_Mm1t SINE B2 -3 190 2 2 1154 238 282 25 101 chrX 74661087 74661144 -91989152 + ID4 SINE ID 33 83 0 2 1154 968 137 21 7 chrX 74661202 74661342 -91988954 + B1_Mur3 SINE Alu 2 143 -6 2 1154 778 224 210 5 chrX 74661575 74661799 -91988497 + B4A SINE B4 2 271 -21 2 1154 195 129 0 0 chrX 74661799 74661830 -91988466 + (CATA)n Simple_repeat Simple_repeat 4 34 0 2 1154 4084 148 43 89 chrX 74662087 74662310 -91987986 - RLTR40 LTR ERVK -17 800 580 2 1154 450 0 0 0 chrX 74662310 74662360 -91987936 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1154 4084 148 43 89 chrX 74662360 74662975 -91987321 - RLTR40 LTR ERVK -238 579 1 2 1154 252 176 20 0 chrX 74663144 74663195 -91987101 + MTEa LTR MaLR 328 379 0 2 1154 552 318 62 44 chrX 74663353 74663626 -91986670 + B4A SINE B4 1 278 -14 2 1154 276 30 0 0 chrX 74663646 74663679 -91986617 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1154 398 241 391 15 chrX 74664329 74664531 -91985765 + B4 SINE B4 2 279 -13 2 1154 471 113 0 0 chrX 74664612 74664683 -91985613 + (GGAA)n Simple_repeat Simple_repeat 1 71 0 2 1154 681 226 15 0 chrX 74664704 74664841 -91985455 + B4 SINE B4 85 223 -69 2 1154 402 162 0 0 chrX 74664841 74664915 -91985381 + A-rich Low_complexity Low_complexity 1 74 0 2 1154 181 260 81 14 chrX 74665283 74665357 -91984939 + MIRb SINE MIR 167 245 -23 2 1154 208 68 65 43 chrX 74665711 74665757 -91984539 + (GTTTG)n Simple_repeat Simple_repeat 2 48 0 2 1154 195 42 0 0 chrX 74665839 74665863 -91984433 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1154 189 0 0 0 chrX 74665863 74665883 -91984413 + (TA)n Simple_repeat Simple_repeat 2 22 0 2 1154 439 215 0 0 chrX 74666057 74666136 -91984160 - ID4_ SINE ID -4 79 1 2 1154 596 247 220 22 chrX 74666234 74666416 -91983880 + ID_B1 SINE B4 4 221 -3 2 1154 26 30 0 0 chrX 74666416 74666449 -91983847 + AT_rich Low_complexity Low_complexity 1 33 0 2 1154 426 286 0 0 chrX 74666518 74666602 -91983694 + RSINE1 SINE B4 2 85 -80 2 1154 29 47 0 0 chrX 74666631 74666674 -91983622 + AT_rich Low_complexity Low_complexity 1 43 0 2 1154 1698 175 145 161 chrX 74666760 74667299 -91982997 + MT2A LTR ERVL 1 530 -3 2 1154 404 168 67 157 chrX 74668201 74668335 -91981961 - B1F SINE Alu -1 148 27 2 1154 863 261 31 49 chrX 74668499 74668785 -91981511 + B4A SINE B4 2 282 -10 2 1154 375 256 0 0 chrX 74668783 74668869 -91981427 - PB1 SINE Alu -40 87 2 3 1154 647 158 15 38 chrX 74669298 74669430 -91980866 + B1_Mur3 SINE Alu 21 149 0 3 1154 652 244 155 0 chrX 74669516 74669832 -91980464 + MTE2a LTR MaLR 2 366 -13 3 1154 711 262 120 21 chrX 74670231 74670465 -91979831 - B4A SINE B4 -27 265 9 3 1154 1467 266 81 98 chrX 74670504 74670960 -91979336 + Lx8 LINE L1 6433 6877 -596 3 1154 1360 105 0 30 chrX 74670960 74670986 -91979310 - B2_Mm2 SINE B2 0 195 170 3 1154 1529 59 0 0 chrX 74670986 74671172 -91979124 + B2_Mm1a SINE B2 1 186 -7 3 1154 1360 105 0 30 chrX 74671172 74671342 -91978954 - B2_Mm2 SINE B2 -26 169 6 3 1154 1467 266 81 98 chrX 74671342 74671478 -91978818 + Lx8 LINE L1 6878 7015 -458 3 1154 701 142 147 6 chrX 74671481 74671637 -91978659 + B2_Mm2 SINE B2 15 192 -3 3 1154 340 245 164 58 chrX 74671640 74671744 -91978552 + Lx8 LINE L1 7010 7124 -349 3 1154 300 37 18 36 chrX 74672123 74672179 -91978117 + (TTTTG)n Simple_repeat Simple_repeat 5 59 0 3 1154 1174 55 7 0 chrX 74672179 74672325 -91977971 - B1_Mus2 SINE Alu 0 147 1 3 1154 922 201 276 14 chrX 74672611 74672904 -91977392 + MTE2b LTR MaLR 10 379 0 3 1154 291 288 12 12 chrX 74673647 74673728 -91976568 + B1F1 SINE Alu 1 81 -68 3 1154 310 180 0 0 chrX 74673734 74673784 -91976512 + B3 SINE B2 87 136 -80 3 1154 439 330 0 0 chrX 74673781 74673896 -91976400 - B3A SINE B2 -68 130 16 3 1154 21 0 0 0 chrX 74674302 74674323 -91975973 + AT_rich Low_complexity Low_complexity 1 21 0 3 1154 822 28 0 0 chrX 74674323 74674429 -91975867 - B1_Mm SINE Alu 0 147 42 3 1154 217 203 0 92 chrX 74674441 74674506 -91975790 + C-rich Low_complexity Low_complexity 2 60 0 3 1154 212 185 0 69 chrX 74674511 74674525 -91975771 - ID_B1 SINE B4 -77 147 94 3 1154 276 93 0 23 chrX 74674525 74674569 -91975727 - B1_Mus2 SINE Alu -92 55 13 3 1154 1406 178 198 13 chrX 74675416 74675730 -91974566 + ORR1D1 LTR MaLR 1 372 -2 3 1154 303 308 10 0 chrX 74675739 74675843 -91974453 - ID_B1 SINE B4 -41 183 79 3 1154 279 274 23 23 chrX 74675839 74675925 -91974371 + PB1D10 SINE Alu 30 115 -2 3 1154 442 166 1 0 chrX 74675990 74676082 -91974214 + B1_Mur2 SINE Alu 48 140 -9 3 1154 480 274 16 39 chrX 74676190 74676319 -91973977 + ID_B1 SINE B4 3 128 -96 3 1154 453 196 31 0 chrX 74676795 74676892 -91973404 + ID_B1 SINE B4 117 216 -8 3 1154 301 308 45 50 chrX 74676890 74677052 -91973244 + MLT1B LTR MaLR 199 349 -25 3 1154 520 244 0 25 chrX 74677040 74677158 -91973138 - PB1D7 SINE Alu 0 120 6 3 1154 279 0 0 0 chrX 74678213 74678244 -91972052 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 1154 316 333 0 39 chrX 74678494 74678740 -91971556 + C-rich Low_complexity Low_complexity 1 236 0 3 1154 203 125 25 0 chrX 74678762 74678802 -91971494 + (TCC)n Simple_repeat Simple_repeat 1 41 0 3 1154 210 37 0 0 chrX 74679529 74679556 -91970740 + (TTG)n Simple_repeat Simple_repeat 2 28 0 3 1154 397 33 0 76 chrX 74679569 74679635 -91970661 - B1_Mm SINE Alu 0 147 87 3 1154 675 133 0 17 chrX 74679983 74680098 -91970198 - B1_Mus2 SINE Alu -34 113 1 3 1154 413 160 35 115 chrX 74680018 74680120 -91970176 - B4 SINE B4 -125 167 75 3 1154 618 219 42 24 chrX 74680120 74680288 -91970008 + ID_B1 SINE B4 2 172 -52 3 1154 928 179 11 16 chrX 74680288 74680470 -91969826 + Lx6 LINE L1 7276 7456 -4 3 1154 243 0 0 0 chrX 74680835 74680862 -91969434 + (TC)n Simple_repeat Simple_repeat 2 28 0 3 1154 247 327 46 18 chrX 74680880 74680989 -91969307 - B4 SINE B4 -169 123 12 3 1154 1535 181 146 12 chrX 74681540 74681870 -91968426 - ORR1D1 LTR MaLR 0 374 1 3 1154 458 259 162 0 chrX 74681897 74681928 -91968368 + L1MB5 LINE L1 5692 5731 -443 3 1154 372 43 0 0 chrX 74681928 74681974 -91968322 + (GAAAA)n Simple_repeat Simple_repeat 4 49 0 3 1154 458 259 162 0 chrX 74681974 74682158 -91968138 + L1MB5 LINE L1 5732 5941 -233 3 1154 216 278 189 0 chrX 74682343 74682433 -91967863 - PB1D10 SINE Alu -2 115 9 3 1154 567 271 0 30 chrX 74682465 74682598 -91967698 - ID_B1 SINE B4 -6 218 90 3 1154 320 274 0 0 chrX 74683252 74683325 -91966971 + MER20 DNA MER1_type 3 75 -144 3 1154 907 166 0 7 chrX 74683419 74683559 -91966737 + B1_Mur1 SINE Alu 1 139 -10 3 1154 207 88 0 0 chrX 74683559 74683593 -91966703 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 3 1154 369 222 69 0 chrX 74684013 74684085 -91966211 - RSINE1 SINE B4 -87 78 2 3 1154 386 320 163 4 chrX 74684155 74684406 -91965890 - B4A SINE B4 0 292 2 3 1154 769 199 21 21 chrX 74684492 74684636 -91965660 - B1_Mur1 SINE Alu -5 144 1 3 1154 295 343 9 19 chrX 74685653 74685760 -91964536 + U6 snRNA snRNA 2 107 0 3 1154 559 257 18 9 chrX 74685809 74685923 -91964373 + RSINE1 SINE B4 37 151 -14 3 1154 204 125 0 0 chrX 74685923 74685955 -91964341 + (CATA)n Simple_repeat Simple_repeat 2 33 0 3 1154 385 341 72 0 chrX 74685983 74686150 -91964146 - MER20 DNA MER1_type -9 210 32 3 1154 1402 76 11 16 chrX 74686223 74686410 -91963886 + B2_Mm2 SINE B2 2 187 -8 3 1154 232 179 358 0 chrX 74686529 74686596 -91963700 + B4 SINE B4 1 91 -201 3 1154 592 262 145 0 chrX 74686930 74687102 -91963194 - B3A SINE B2 0 198 2 3 1154 723 266 13 57 chrX 74687134 74687361 -91962935 + ID_B1 SINE B4 5 221 -3 3 1154 305 258 75 43 chrX 74687456 74687549 -91962747 - PB1D10 SINE Alu -20 97 2 3 1154 289 311 57 0 chrX 74687846 74687952 -91962344 - MER45R DNA Tip100 -1398 183 72 3 1154 481 299 0 0 chrX 74687998 74688115 -91962181 - PB1 SINE Alu 0 127 11 3 1154 939 275 99 61 chrX 74688115 74688586 -91961710 + MT2A LTR ERVL 1 557 -10 3 1154 216 0 0 0 chrX 74688730 74688754 -91961542 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1154 192 40 0 0 chrX 74689842 74689867 -91960429 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1154 566 28 14 0 chrX 74689867 74689939 -91960357 + (GA)n Simple_repeat Simple_repeat 2 74 0 3 1154 262 326 87 0 chrX 74690250 74690342 -91959954 - PB1 SINE Alu -27 100 1 3 1154 227 178 0 0 chrX 74690471 74690516 -91959780 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 3 1154 295 257 198 9 chrX 74690571 74690677 -91959619 - B4A SINE B4 -86 206 81 3 1154 3792 183 67 32 chrX 74690680 74691546 -91958750 - RMER1B Other Other -11 1055 69 3 1154 243 220 40 0 chrX 74691569 74691619 -91958677 - B4 SINE B4 -231 61 10 3 1154 444 333 0 50 chrX 74691893 74692032 -91958264 - RSINE1 SINE B4 -31 134 3 3 1154 353 304 22 7 chrX 74692845 74692984 -91957312 + B1F SINE Alu 1 141 -8 3 1154 560 267 51 6 chrX 74692991 74693168 -91957128 + L1MA4 LINE L1 5744 5928 -372 3 1154 549 282 20 0 chrX 74693441 74693590 -91956706 - ID_B1 SINE B4 -62 162 11 3 1154 315 148 17 8 chrX 74693601 74693673 -91956623 - PB1D9 SINE Alu -75 72 3 3 1154 860 176 14 0 chrX 74693725 74693867 -91956429 - B1_Mur4 SINE Alu -6 144 1 3 1154 429 302 62 12 chrX 74694349 74694510 -91955786 + B4A SINE B4 63 231 -61 3 1154 540 263 25 37 chrX 74694514 74694676 -91955620 + RSINE1 SINE B4 6 165 0 3 1154 30 0 0 0 chrX 74694676 74694706 -91955590 + AT_rich Low_complexity Low_complexity 1 30 0 3 1154 408 20 0 0 chrX 74694775 74694824 -91955472 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1154 344 309 0 20 chrX 74694826 74694925 -91955371 + GA-rich Low_complexity Low_complexity 4 100 0 3 1154 542 216 56 0 chrX 74695080 74695205 -91955091 - ORR1E LTR MaLR -225 134 3 3 1154 898 123 58 0 chrX 74695279 74695417 -91954879 - B1_Mus1 SINE Alu 0 148 3 3 1154 376 292 195 6 chrX 74695890 74696059 -91954237 + ID_B1 SINE B4 1 201 -23 3 1154 201 329 13 76 chrX 74696886 74696965 -91953331 - L2b LINE L2 -26 3349 3276 3 1154 515 303 65 38 chrX 74697045 74697215 -91953081 + B4 SINE B4 90 269 -23 3 1154 297 0 0 0 chrX 74697215 74697248 -91953048 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1154 515 303 65 38 chrX 74697248 74697262 -91953034 + B4 SINE B4 270 279 -13 3 1154 501 94 0 0 chrX 74697297 74697382 -91952914 + (GA)n Simple_repeat Simple_repeat 2 86 0 3 1154 223 200 68 43 chrX 74697752 74697821 -91952475 + B3 SINE B2 3 84 -114 3 1154 934 298 15 26 chrX 74698370 74698642 -91951654 - B4A SINE B4 -4 288 20 3 1154 391 277 20 0 chrX 74698687 74698788 -91951508 + PB1D10 SINE Alu 6 108 -9 3 1154 846 163 0 0 chrX 74698859 74698994 -91951302 + B1_Mur4 SINE Alu 15 149 -1 3 1154 3587 173 32 3 chrX 74699020 74699648 -91950648 + Lx5 LINE L1 6277 6922 -128 3 1154 402 362 97 38 chrX 74699678 74699945 -91950351 + B4A SINE B4 2 284 -8 3 1154 721 198 145 11 chrX 74700646 74700825 -91949471 - MTEb LTR MaLR -2 377 175 3 1154 273 279 0 0 chrX 74700884 74701013 -91949283 + ORR1B1-int LTR MaLR 626 754 -755 3 1154 888 102 0 0 chrX 74700910 74701037 -91949259 + B1_Mus2 SINE Alu 5 131 -16 3 1154 496 252 65 40 chrX 74701013 74701137 -91949159 + ID_B1 SINE B4 68 194 -30 3 1154 486 88 0 0 chrX 74701144 74701212 -91949084 + (TC)n Simple_repeat Simple_repeat 1 68 0 3 1154 839 231 32 21 chrX 74701238 74701428 -91948868 + B3A SINE B2 6 197 -1 3 1154 640 267 6 28 chrX 74701475 74701652 -91948644 + ID_B1 SINE B4 39 211 -13 3 1154 292 342 9 35 chrX 74701694 74701809 -91948487 + PB1D10 SINE Alu 1 112 -5 3 1154 338 176 0 12 chrX 74702465 74702551 -91947745 + GA-rich Low_complexity Low_complexity 2 86 0 3 1154 225 0 0 0 chrX 74702696 74702721 -91947575 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1154 225 184 0 0 chrX 74702895 74702944 -91947352 + T-rich Low_complexity Low_complexity 1 49 0 4 1154 236 281 133 69 chrX 74703072 74703305 -91946991 + MER58B DNA MER1_type 86 333 -8 4 1154 232 307 26 13 chrX 74703561 74703637 -91946659 + MER45R DNA Tip100 1505 1581 0 4 1154 216 339 0 0 chrX 74703681 74703743 -91946553 - BC1_Mm scRNA scRNA -89 63 2 4 1154 326 229 0 0 chrX 74703779 74703840 -91946456 - B1F2 SINE Alu -88 61 1 4 1154 1125 229 24 31 chrX 74704421 74704710 -91945586 + B4 SINE B4 2 288 -4 4 1154 457 267 33 8 chrX 74704925 74705046 -91945250 + RSINE1 SINE B4 9 132 -33 4 1154 889 102 14 7 chrX 74705345 74705493 -91944803 + (TTTC)n Simple_repeat Simple_repeat 3 151 0 4 1154 247 203 40 26 chrX 74705496 74705572 -91944724 + (TATATG)n Simple_repeat Simple_repeat 4 80 0 4 1154 382 188 10 10 chrX 74705593 74705690 -91944606 + (TG)n Simple_repeat Simple_repeat 1 97 0 4 1154 322 317 85 85 chrX 74705742 74705966 -91944330 - B4A SINE B4 0 292 69 4 1154 381 271 39 10 chrX 74705967 74706136 -91944160 - Lx7 LINE L1 0 7696 7561 4 1154 216 0 0 0 chrX 74706193 74706217 -91944079 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1154 780 201 23 45 chrX 74706241 74706418 -91943878 - Lx7 LINE L1 -285 7411 7239 4 1154 326 230 0 13 chrX 74706464 74706539 -91943757 - B4A SINE B4 -218 74 1 4 1154 21 57 0 0 chrX 74706889 74706924 -91943372 + AT_rich Low_complexity Low_complexity 1 35 0 4 1154 258 28 0 0 chrX 74707029 74707065 -91943231 - B1_Mm SINE Alu -1 146 111 4 1154 1038 75 0 0 chrX 74707083 74707216 -91943080 + B1_Mus2 SINE Alu 5 137 -10 4 1154 447 243 93 0 chrX 74707840 74707947 -91942349 + PB1D10 SINE Alu 1 117 0 4 1154 646 207 20 40 chrX 74707952 74708103 -91942193 + B1_Mur1 SINE Alu 1 148 -1 4 1154 764 256 6 0 chrX 74708252 74708416 -91941880 + ID_B1 SINE B4 2 166 -58 4 1154 649 155 161 8 chrX 74708496 74708626 -91941670 + B1_Mur4 SINE Alu 1 150 0 4 1154 439 301 126 52 chrX 74709022 74709253 -91941043 + B4 SINE B4 4 251 -41 4 1154 496 175 89 24 chrX 74709254 74709377 -91940919 + B1_Mus1 SINE Alu 16 146 -2 4 1154 323 306 7 69 chrX 74709522 74709666 -91940630 - Cheshire DNA MER1_type -2138 282 148 4 1154 780 269 29 9 chrX 74710277 74710487 -91939809 + ID_B1 SINE B4 2 215 -9 4 1154 399 41 0 0 chrX 74710488 74710537 -91939759 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1154 1380 44 0 0 chrX 74710539 74710719 -91939577 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 1154 22 56 0 0 chrX 74710862 74710898 -91939398 + AT_rich Low_complexity Low_complexity 1 36 0 4 1155 279 303 0 54 chrX 74711556 74711685 -91938611 - L1MD2 LINE L1 -460 5899 5778 4 1155 357 292 0 0 chrX 74711790 74711879 -91938417 + B1F1 SINE Alu 27 115 -34 4 1155 522 0 0 0 chrX 74711892 74711950 -91938346 + (GA)n Simple_repeat Simple_repeat 1 58 0 4 1155 656 193 200 22 chrX 74711955 74712135 -91938161 + B3 SINE B2 2 213 -3 4 1155 387 0 0 0 chrX 74713200 74713243 -91937053 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1155 213 39 0 0 chrX 74713297 74713323 -91936973 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 1155 718 250 25 0 chrX 74713361 74713521 -91936775 - RSINE1 SINE B4 0 165 2 4 1155 628 294 18 0 chrX 74713994 74714066 -91936230 + ID SINE ID 12 86 -138 4 1155 319 321 18 0 chrX 74714066 74714178 -91936118 + PB1D10 SINE Alu 4 117 0 4 1155 228 288 27 0 chrX 74714392 74714465 -91935831 + B1F1 SINE Alu 73 147 -2 4 1155 240 257 28 14 chrX 74714466 74714537 -91935759 + GA-rich Low_complexity Low_complexity 1 72 0 4 1155 244 205 0 49 chrX 74715404 74715486 -91934810 + CT-rich Low_complexity Low_complexity 3 80 0 4 1155 333 0 0 0 chrX 74715486 74715523 -91934773 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1155 535 306 0 0 chrX 74715526 74715673 -91934623 - B3A SINE B2 -47 151 5 4 1155 222 91 0 0 chrX 74716060 74716093 -91934203 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 4 1155 652 231 13 13 chrX 74716228 74716377 -91933919 + B1_Mur1 SINE Alu 1 149 0 4 1155 207 139 0 0 chrX 74716383 74716419 -91933877 + (GGA)n Simple_repeat Simple_repeat 1 36 0 4 1155 769 190 99 11 chrX 74716434 74716615 -91933681 + B3A SINE B2 1 197 -1 4 1155 3827 5 0 0 chrX 74716657 74717076 -91933220 + L1Md_A LINE L1 6164 6582 0 4 1155 204 40 0 0 chrX 74717406 74717431 -91932865 + (CCCCCA)n Simple_repeat Simple_repeat 5 29 0 4 1155 679 271 68 60 chrX 74717534 74717769 -91932527 - B4A SINE B4 0 292 56 4 1155 599 280 117 70 chrX 74717771 74718028 -91932268 - B4A SINE B4 -22 270 2 4 1155 191 259 0 105 chrX 74718940 74719035 -91931261 - MIR SINE MIR -5 257 173 4 1155 403 315 18 9 chrX 74719138 74719247 -91931049 + RSINE1 SINE B4 3 112 -53 4 1155 807 290 30 61 chrX 74719465 74719762 -91930534 - B4A SINE B4 -2 290 3 4 1155 735 198 77 29 chrX 74720254 74720462 -91929834 - ID_B1 SINE B4 -5 219 2 4 1155 226 171 29 0 chrX 74720559 74720629 -91929667 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 1155 609 318 28 32 chrX 74720693 74720911 -91929385 - B4A SINE B4 -75 217 1 4 1155 643 245 32 97 chrX 74721050 74721267 -91929029 + B3 SINE B2 1 203 -13 4 1155 228 35 0 0 chrX 74721297 74721326 -91928970 + (TATG)n Simple_repeat Simple_repeat 2 30 0 4 1155 1211 55 0 0 chrX 74721326 74721472 -91928824 - B1_Mus2 SINE Alu -1 146 1 4 1155 228 67 0 0 chrX 74721877 74721907 -91928389 + (TA)n Simple_repeat Simple_repeat 2 31 0 4 1155 630 182 79 21 chrX 74721949 74722089 -91928207 - B1_Mur4 SINE Alu -1 149 2 4 1155 628 299 99 34 chrX 74722200 74722474 -91927822 + B4A SINE B4 2 292 0 4 1155 543 96 0 0 chrX 74722488 74722571 -91927725 + (CA)n Simple_repeat Simple_repeat 2 84 0 4 1155 514 278 32 0 chrX 74723205 74723331 -91926965 + B4A SINE B4 2 131 -161 4 1155 450 0 0 0 chrX 74723501 74723551 -91926745 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1155 292 244 21 72 chrX 74723625 74723722 -91926574 + ORR1E LTR MaLR 9 100 -259 4 1155 337 280 27 0 chrX 74724021 74724096 -91926200 - ID4_ SINE ID -3 80 4 4 1155 215 203 0 33 chrX 74724100 74724161 -91926135 + T-rich Low_complexity Low_complexity 2 60 0 4 1155 243 154 153 97 chrX 74724163 74724180 -91926116 - ID_B1 SINE B4 -8 216 205 4 1155 450 0 0 0 chrX 74724180 74724230 -91926066 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 1155 243 154 153 97 chrX 74724230 74724284 -91926012 - ID_B1 SINE B4 -20 204 141 4 1155 748 275 16 6 chrX 74724314 74724497 -91925799 - B4A SINE B4 -13 279 95 4 1155 364 283 0 10 chrX 74724522 74724622 -91925674 - PB1D10 SINE Alu -9 108 10 4 1155 21 57 0 0 chrX 74724670 74724705 -91925591 + AT_rich Low_complexity Low_complexity 1 35 0 4 1155 27 29 0 0 chrX 74724752 74724786 -91925510 + AT_rich Low_complexity Low_complexity 1 34 0 4 1155 356 333 58 7 chrX 74725416 74725555 -91924741 + B1F SINE Alu 3 148 -1 4 1155 479 335 57 40 chrX 74725616 74725843 -91924453 + B4A SINE B4 41 271 -21 4 1155 627 231 0 0 chrX 74725957 74726078 -91924218 + RSINE1 SINE B4 4 124 -41 4 1155 441 0 0 0 chrX 74726080 74726129 -91924167 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1155 493 134 193 18 chrX 74726136 74726250 -91924046 - Lx7 LINE L1 0 7696 7563 4 1155 2729 46 0 0 chrX 74726233 74726557 -91923739 + L1Md_F2 LINE L1 5263 5586 -297 4 1155 8286 41 2 6 chrX 74726557 74727557 -91922739 + L1Md_F2 LINE L1 5587 6582 0 4 1155 2318 222 32 45 chrX 74727557 74728141 -91922155 - Lx7 LINE L1 -126 7570 6994 4 1155 1045 208 10 5 chrX 74728141 74728344 -91921952 - Lx7 LINE L1 -875 6821 6618 4 1155 3076 193 31 20 chrX 74728343 74729265 -91921031 - Lx7 LINE L1 -1337 6359 5404 4 1155 3858 164 8 25 chrX 74729267 74730012 -91920284 - Lx7 LINE L1 -729 5151 4420 4 1155 38 43 0 14 chrX 74730098 74730129 -91920167 + AT_rich Low_complexity Low_complexity 1 31 0 4 1155 1075 110 0 0 chrX 74730129 74730275 -91920021 - B1_Mm SINE Alu 0 147 2 4 1155 38 43 0 14 chrX 74730275 74730313 -91919983 + AT_rich Low_complexity Low_complexity 1 38 0 4 1155 1083 179 156 14 chrX 74730479 74730774 -91919522 - Lx7 LINE L1 -3945 1935 1599 4 1155 4122 202 44 23 chrX 74730771 74731652 -91918644 - Lx7 LINE L1 -6529 1199 300 4 1155 644 224 67 0 chrX 74731658 74731792 -91918504 - B1_Mur2 SINE Alu -5 144 2 4 1155 21 36 0 0 chrX 74731865 74731893 -91918403 + AT_rich Low_complexity Low_complexity 1 28 0 4 1155 261 244 11 32 chrX 74731928 74732021 -91918275 + Lx6 LINE L1 7344 7434 -26 4 1155 240 118 19 38 chrX 74732553 74732606 -91917690 + T-rich Low_complexity Low_complexity 2 53 0 4 1155 1162 61 0 26 chrX 74732608 74732759 -91917537 - B1_Mm SINE Alu 0 147 1 4 1155 512 232 47 23 chrX 74732760 74732888 -91917408 - ID_B1 SINE B4 -1 223 93 4 1155 590 153 71 21 chrX 74732889 74733029 -91917267 - MTD LTR MaLR -14 405 259 4 1155 423 202 76 42 chrX 74733043 74733162 -91917134 - MTD LTR MaLR -294 125 3 4 1155 265 279 29 0 chrX 74733174 74733242 -91917054 - ID_B1 SINE B4 -132 92 23 4 1155 1349 214 107 9 chrX 74733961 74734306 -91915990 + MTEb LTR MaLR 1 379 0 4 1155 435 19 0 0 chrX 74734636 74734688 -91915608 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 1155 324 0 0 0 chrX 74734688 74734723 -91915573 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 1155 525 298 136 32 chrX 74734762 74735012 -91915284 - B4A SINE B4 -16 276 1 4 1155 1661 163 61 35 chrX 74735061 74735404 -91914892 - ORR1D1 LTR MaLR -22 352 1 4 1155 729 249 6 19 chrX 74735998 74736158 -91914138 + B3A SINE B2 4 161 -37 4 1155 598 221 86 55 chrX 74736225 74736424 -91913872 + B3A SINE B2 1 200 -16 4 1155 382 151 0 19 chrX 74736437 74736545 -91913751 + (CA)n Simple_repeat Simple_repeat 1 106 0 4 1155 994 78 0 0 chrX 74736663 74736804 -91913492 - ORR1A1 LTR MaLR -205 141 1 4 1155 13972 65 3 1 chrX 74736804 74738592 -91911704 - ORR1A1-int LTR MaLR 0 1792 1 4 1155 1757 64 4 49 chrX 74738592 74738855 -91911441 - ORR1A1 LTR MaLR 0 346 96 4 1155 5596 65 18 6 chrX 74738879 74739658 -91910638 - RLTR13C2 LTR ERVK -20 788 1 4 1155 801 65 32 0 chrX 74739658 74739764 -91910532 - ORR1A1 LTR MaLR -236 110 1 4 1155 360 208 0 14 chrX 74739787 74739860 -91910436 + B1_Mur1 SINE Alu 70 141 -8 5 1155 315 0 0 0 chrX 74739863 74739898 -91910398 + (TTTTA)n Simple_repeat Simple_repeat 5 39 0 5 1155 957 255 0 15 chrX 74739898 74740092 -91910204 - B3 SINE B2 -20 196 5 5 1155 792 181 209 0 chrX 74740141 74740318 -91909978 - B3 SINE B2 0 216 3 5 1155 426 289 133 5 chrX 74740326 74740514 -91909782 - B3 SINE B2 -3 213 2 5 1155 257 68 23 0 chrX 74740665 74740709 -91909587 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 5 1155 362 327 9 0 chrX 74740979 74741086 -91909210 + PB1 SINE Alu 4 111 -16 5 1155 944 288 111 6 chrX 74741857 74742189 -91908107 - MTEa LTR MaLR -12 367 1 5 1155 387 275 0 0 chrX 74743084 74743164 -91907132 - B1_Mur3 SINE Alu -65 84 5 5 1155 253 306 0 0 chrX 74743110 74743172 -91907124 - B4 SINE B4 -149 143 82 5 1155 410 287 0 10 chrX 74743176 74743278 -91907018 - ID_B1 SINE B4 -14 210 110 5 1155 307 87 239 28 chrX 74743272 74743343 -91906953 + B1_Mur2 SINE Alu 63 148 -1 5 1155 573 234 7 35 chrX 74743588 74743730 -91906566 - B1_Mur1 SINE Alu -2 147 10 5 1155 788 110 87 14 chrX 74743751 74743889 -91906407 + B1_Mus1 SINE Alu 1 148 0 5 1155 1584 157 39 0 chrX 74744296 74744582 -91905714 + L1_Mur3 LINE L1 4941 5237 -643 5 1155 267 234 50 0 chrX 74744582 74744723 -91905573 + ORR1B1-int LTR MaLR 607 754 -755 5 1155 986 86 7 0 chrX 74744622 74744761 -91905535 + B1_Mus1 SINE Alu 7 146 -2 5 1155 729 34 0 0 chrX 74744761 74744849 -91905447 + (GAGAA)n Simple_repeat Simple_repeat 4 91 0 5 1155 493 187 75 0 chrX 74745172 74745191 -91905105 + B4 SINE B4 65 91 -201 5 1155 707 20 18 5 chrX 74745191 74745304 -91904992 + B1_Mus2 SINE Alu 1 120 0 5 1155 256 18 69 35 chrX 74745306 74745364 -91904932 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 5 1155 275 296 123 0 chrX 74745431 74745512 -91904784 + PB1D10 SINE Alu 4 94 -23 5 1155 1337 257 57 90 chrX 74745713 74745931 -91904365 - L1M2 LINE L1 -1313 4830 4660 5 1155 2041 61 82 4 chrX 74745931 74746210 -91904086 - L1Md_F2 LINE L1 -1 6581 6281 5 1155 1624 204 57 48 chrX 74746210 74746669 -91903627 - L1_Rod LINE L1 -1242 4605 4143 5 1155 3866 176 45 45 chrX 74746654 74747913 -91902383 - L1_Rod LINE L1 -4114 1733 469 5 1155 844 292 14 35 chrX 74748237 74748524 -91901772 - B4A SINE B4 -8 284 4 5 1155 387 310 7 14 chrX 74749818 74749965 -91900331 + MLT1C LTR MaLR 314 459 -8 5 1155 229 316 95 113 chrX 74750119 74750168 -91900128 - ID_B1 SINE B4 -7 217 1 5 1155 1094 99 12 6 chrX 74750168 74750340 -91899956 - B2_Mm1t SINE B2 -20 173 1 5 1155 266 139 0 0 chrX 74750363 74750406 -91899890 - ID_B1 SINE B4 -70 154 112 5 1155 1047 174 261 21 chrX 74750664 74750947 -91899349 - MTC LTR MaLR 0 421 71 5 1155 261 163 0 0 chrX 74750947 74750996 -91899300 + CT-rich Low_complexity Low_complexity 1 49 0 5 1155 773 143 8 0 chrX 74750996 74751129 -91899167 - B1_Mur4 SINE Alu -8 142 9 5 1155 472 161 0 12 chrX 74751135 74751217 -91899079 - MTC LTR MaLR -340 81 1 5 1155 233 270 100 11 chrX 74751596 74751686 -91898610 + ID_B1 SINE B4 127 224 0 5 1155 888 241 49 0 chrX 74751706 74751909 -91898387 + B3 SINE B2 4 216 0 5 1155 235 0 28 28 chrX 74751951 74751987 -91898309 + (TAA)n Simple_repeat Simple_repeat 2 37 0 5 1155 282 330 9 28 chrX 74752030 74752139 -91898157 + PB1D10 SINE Alu 3 109 -8 5 1155 245 245 0 0 chrX 74752550 74752603 -91897693 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1155 214 278 0 18 chrX 74752620 74752675 -91897621 + ID4 SINE ID 1 54 -29 5 1155 629 236 43 0 chrX 74752784 74752924 -91897372 - B1_Mur1 SINE Alu -2 147 2 5 1155 609 263 73 19 chrX 74753118 74753320 -91896976 + B3A SINE B2 1 189 -6 5 1155 207 0 0 0 chrX 74753330 74753353 -91896943 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 5 1155 278 277 142 0 chrX 74753354 74753495 -91896801 - L1MC LINE L1 -886 5260 5100 5 1155 456 111 0 0 chrX 74753613 74753694 -91896602 + (CA)n Simple_repeat Simple_repeat 2 82 0 5 1155 227 194 269 0 chrX 74753911 74753978 -91896318 - PB1D10 SINE Alu -6 111 27 5 1155 563 274 90 20 chrX 74754032 74754233 -91896063 - B3 SINE B2 -1 215 1 5 1155 21 0 0 0 chrX 74756387 74756408 -91893888 + GC_rich Low_complexity Low_complexity 1 21 0 5 1155 22 0 0 0 chrX 74756783 74756805 -91893491 + GC_rich Low_complexity Low_complexity 1 22 0 5 1155 222 208 0 0 chrX 74757482 74757530 -91892766 + T-rich Low_complexity Low_complexity 1 48 0 5 1155 1530 161 101 32 chrX 74758416 74758762 -91891534 + ORR1D1 LTR MaLR 5 374 0 5 1155 623 288 91 83 chrX 74758954 74759196 -91891100 - B4A SINE B4 0 292 49 5 1155 1219 34 7 0 chrX 74759231 74759378 -91890918 - B1_Mus1 SINE Alu 0 148 1 5 1155 289 297 27 0 chrX 74759953 74760027 -91890269 - RSINE1 SINE B4 -31 134 59 5 1155 1041 54 0 109 chrX 74760146 74760311 -91889985 - B1_Mm SINE Alu 0 147 1 5 1155 207 100 0 0 chrX 74760876 74760906 -91889390 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1155 756 246 118 73 chrX 74761006 74761103 -91889193 - B4A SINE B4 -8 284 167 5 1155 360 0 0 0 chrX 74761103 74761143 -91889153 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1155 756 246 118 73 chrX 74761143 74761317 -91888979 - B4A SINE B4 -126 166 1 5 1155 549 269 14 34 chrX 74761327 74761473 -91888823 - B1_Mur2 SINE Alu -5 144 2 5 1155 348 332 96 5 chrX 74761475 74761578 -91888718 - B4 SINE B4 -64 228 126 5 1155 628 167 77 31 chrX 74761578 74761708 -91888588 - B1_Mus1 SINE Alu -11 137 2 5 1155 348 332 96 5 chrX 74761708 74761813 -91888483 - B4 SINE B4 -167 125 2 5 1155 266 280 228 10 chrX 74761912 74762013 -91888283 - PB1 SINE Alu -2 125 3 5 1155 217 298 0 0 chrX 74762428 74762485 -91887811 + CT-rich Low_complexity Low_complexity 2 58 0 5 1155 280 291 56 34 chrX 74762486 74762575 -91887721 - PB1D9 SINE Alu -6 114 24 5 1155 258 293 12 12 chrX 74762687 74762770 -91887526 - B4A SINE B4 -25 267 185 5 1155 306 265 0 0 chrX 74763452 74763520 -91886776 - B3A SINE B2 -129 69 2 5 1155 223 241 0 0 chrX 74763520 74763578 -91886718 - B1F SINE Alu -42 75 18 5 1155 1588 32 21 0 chrX 74763992 74764180 -91886116 + B2_Mm1a SINE B2 1 192 -1 5 1155 1101 200 79 32 chrX 74764309 74764562 -91885734 + MTD LTR MaLR 1 265 -154 5 1155 548 223 16 24 chrX 74764629 74764753 -91885543 + B3 SINE B2 94 216 0 5 1155 269 305 42 25 chrX 74765041 74765167 -91885129 - B1F SINE Alu -7 142 15 5 1155 644 183 169 7 chrX 74765187 74765252 -91885044 - ORR1D1 LTR MaLR -194 180 91 5 1155 522 31 0 0 chrX 74765252 74765316 -91884980 + (CA)n Simple_repeat Simple_repeat 2 65 0 5 1155 644 183 169 7 chrX 74765316 74765404 -91884892 - ORR1D1 LTR MaLR -284 90 2 5 1155 582 311 141 0 chrX 74765506 74765747 -91884549 - B4A SINE B4 -16 276 2 5 1155 243 0 0 0 chrX 74765974 74766001 -91884295 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 5 1155 270 272 35 0 chrX 74766810 74766892 -91883404 - ID4 SINE ID -53 99 9 5 1155 360 0 0 0 chrX 74766996 74767036 -91883260 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1155 234 0 0 0 chrX 74767036 74767061 -91883235 + (GA)n Simple_repeat Simple_repeat 1 26 0 5 1155 466 300 79 0 chrX 74767217 74767357 -91882939 - ID_B1 SINE B4 -62 162 12 5 1155 727 120 117 29 chrX 74767409 74767546 -91882750 + B1_Mur3 SINE Alu 1 149 0 5 1155 21 36 0 0 chrX 74767641 74767669 -91882627 + AT_rich Low_complexity Low_complexity 1 28 0 5 1155 792 220 91 0 chrX 74767672 74767858 -91882438 - B3 SINE B2 -13 203 1 5 1155 251 271 84 103 chrX 74767871 74767978 -91882318 - PB1D7 SINE Alu -5 115 11 5 1155 216 281 60 45 chrX 74767987 74768054 -91882242 - PB1 SINE Alu -58 69 2 5 1155 252 230 118 26 chrX 74768510 74768586 -91881710 - ID4_ SINE ID 0 83 1 5 1155 336 103 0 0 chrX 74768945 74769003 -91881293 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 1155 314 307 10 19 chrX 74769003 74769106 -91881190 - PB1D10 SINE Alu -5 112 11 5 1155 503 262 35 29 chrX 74769021 74769194 -91881102 - ID_B1 SINE B4 -49 175 2 5 1155 313 255 10 39 chrX 74769209 74769311 -91880985 - RSINE1 SINE B4 -55 110 12 5 1155 330 207 35 12 chrX 74769819 74769947 -91880349 - B1F SINE Alu 0 149 18 5 1155 1212 40 0 13 chrX 74769954 74770104 -91880192 + B1_Mus1 SINE Alu 1 148 0 5 1155 223 245 0 0 chrX 74770570 74770619 -91879677 - ID2 SINE ID -34 49 1 5 1155 597 227 202 11 chrX 74771692 74771870 -91878426 - RMER15 LTR ERVL -38 537 326 5 1155 313 231 0 25 chrX 74772021 74772101 -91878195 - RSINE1 SINE B4 -22 143 66 5 1155 465 263 140 22 chrX 74772423 74772695 -91877601 - L1MB7 LINE L1 -1 6183 5880 5 1155 753 131 61 68 chrX 74772718 74772865 -91877431 + B1_Mur2 SINE Alu 1 146 -3 5 1155 949 279 25 18 chrX 74772936 74773221 -91877075 - B4A SINE B4 -2 290 4 5 1155 962 276 36 18 chrX 74773482 74773759 -91876537 + B4A SINE B4 11 292 0 5 1155 565 232 60 98 chrX 74774389 74774604 -91875692 - B3 SINE B2 -5 211 5 5 1155 320 330 17 8 chrX 74776325 74776444 -91873852 - MTE2a LTR MaLR -62 317 198 5 1155 198 0 0 0 chrX 74776602 74776624 -91873672 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1155 1198 48 0 0 chrX 74776624 74776770 -91873526 - B1_Mus2 SINE Alu 0 147 2 6 1155 253 197 14 14 chrX 74776886 74776958 -91873338 + CT-rich Low_complexity Low_complexity 2 73 0 6 1155 877 232 95 0 chrX 74776958 74777148 -91873148 - ID_B1 SINE B4 -16 208 1 6 1155 857 244 5 35 chrX 74777403 74777603 -91872693 + B3A SINE B2 1 194 -4 6 1155 21 0 0 0 chrX 74777725 74777746 -91872550 + AT_rich Low_complexity Low_complexity 1 21 0 6 1155 369 286 85 31 chrX 74777754 74777884 -91872412 - RSINE1 SINE B4 -8 157 21 6 1155 230 239 29 43 chrX 74777877 74777947 -91872349 - MT2B2 LTR ERVL -332 252 184 6 1155 223 390 13 25 chrX 74777894 74777973 -91872323 - B4 SINE B4 -129 163 86 6 1155 888 37 0 0 chrX 74778007 74778115 -91872181 + (TTTCC)n Simple_repeat Simple_repeat 3 110 0 6 1155 543 90 0 0 chrX 74778117 74778195 -91872101 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 6 1155 1166 50 0 0 chrX 74778197 74778337 -91871959 - B1_Mus2 SINE Alu -6 141 2 6 1155 503 128 0 11 chrX 74778392 74778479 -91871817 + (TCCC)n Simple_repeat Simple_repeat 3 88 0 6 1155 585 198 134 8 chrX 74778526 74778764 -91871532 + Lx7 LINE L1 7338 7690 -6 6 1155 526 342 0 49 chrX 74778822 74778985 -91871311 - RSINE1 SINE B4 0 165 11 6 1155 1203 41 0 7 chrX 74779051 74779199 -91871097 + B1_Mus2 SINE Alu 1 147 0 6 1155 407 241 67 59 chrX 74779963 74780082 -91870214 - B1F SINE Alu -29 120 1 6 1155 406 192 225 70 chrX 74780112 74780241 -91870055 - B1F2 SINE Alu 0 149 1 6 1155 287 82 0 75 chrX 74781076 74781129 -91869167 - B1_Mur3 SINE Alu -15 134 86 6 1155 2341 201 86 69 chrX 74781897 74782294 -91868002 - RLTR18-int LTR ERVK -493 4868 4473 6 1155 402 39 0 0 chrX 74782294 74782346 -91867950 + (TC)n Simple_repeat Simple_repeat 2 53 0 6 1155 2341 201 86 69 chrX 74782346 74782689 -91867607 - RLTR18-int LTR ERVK -889 4472 4116 6 1155 453 210 39 6 chrX 74783670 74783894 -91866402 - RLTR42-int LTR ERVK -3353 2169 2039 6 1155 928 268 102 25 chrX 74784600 74784963 -91865333 - Lx6 LINE L1 -1 7459 7069 6 1155 3165 115 22 9 chrX 74784962 74785496 -91864800 + L1_Mur2 LINE L1 3878 4418 -1459 6 1155 21 57 0 0 chrX 74785496 74785531 -91864765 + AT_rich Low_complexity Low_complexity 1 35 0 6 1155 1083 212 153 18 chrX 74785904 74786244 -91864052 - RLTR18-int LTR ERVK -1791 3570 3185 6 1155 760 184 71 0 chrX 74786242 74786410 -91863886 - RLTR18-int LTR ERVK -2375 2986 2807 6 1155 412 209 113 0 chrX 74786430 74786545 -91863751 - RLTR18-int LTR ERVK -2705 2656 2529 6 1155 508 373 0 7 chrX 74786896 74787201 -91863095 - MYSERV6-int LTR ERVK -8242 717 415 6 1155 657 200 73 15 chrX 74788183 74788320 -91861976 - B1_Mur4 SINE Alu -5 145 1 6 1155 729 273 26 26 chrX 74788543 74788624 -91861672 + ID SINE ID 2 82 -142 6 1155 258 350 32 71 chrX 74788624 74788750 -91861546 + B1_Mm SINE Alu 3 123 -24 6 1155 588 307 39 17 chrX 74788896 74789075 -91861221 - B4A SINE B4 -108 184 2 6 1155 314 264 0 65 chrX 74789077 74789170 -91861126 - PB1D10 SINE Alu 0 117 31 6 1155 300 264 138 0 chrX 74789210 74789297 -91860999 - B3A SINE B2 0 198 100 6 1155 849 228 14 23 chrX 74789416 74789632 -91860664 + ID_B1 SINE B4 2 215 -9 6 1155 280 250 0 53 chrX 74790000 74790076 -91860220 + ID4_ SINE ID 2 73 -79 6 1155 351 227 121 33 chrX 74791022 74791113 -91859183 - PB1D10 SINE Alu -2 115 17 6 1155 242 296 165 16 chrX 74792450 74792577 -91857719 + B4A SINE B4 24 169 -123 6 1155 1140 49 42 0 chrX 74792869 74793011 -91857285 - B1_Mus1 SINE Alu 0 148 1 6 1155 309 260 0 14 chrX 74793237 74793311 -91856985 + B4 SINE B4 3 75 -217 6 1155 279 0 0 0 chrX 74793484 74793515 -91856781 + (TC)n Simple_repeat Simple_repeat 1 31 0 6 1155 364 198 35 47 chrX 74793854 74793880 -91856416 - PB1D10 SINE Alu -2 115 32 6 1155 381 186 0 0 chrX 74793880 74793939 -91856357 - ID_B1 SINE B4 -53 171 113 6 1155 394 289 56 31 chrX 74794298 74794459 -91855837 - RSINE1 SINE B4 0 165 1 6 1155 411 113 0 0 chrX 74795143 74795214 -91855082 + (CTA)n Simple_repeat Simple_repeat 1 71 0 6 1155 301 367 0 98 chrX 74795304 74795467 -91854829 - B4 SINE B4 -144 148 2 6 1155 456 300 0 148 chrX 74795467 74795642 -91854654 - B4 SINE B4 -95 197 49 6 1155 600 14 0 0 chrX 74796284 74796353 -91853943 + (TTCTC)n Simple_repeat Simple_repeat 1 69 0 6 1155 1147 64 0 0 chrX 74796354 74796495 -91853801 - B1_Mus1 SINE Alu -6 142 2 6 1155 669 269 62 41 chrX 74796529 74796937 -91853359 - L1MB3 LINE L1 -111 6072 5655 6 1155 561 280 0 116 chrX 74797069 74797197 -91853099 - B4A SINE B4 -124 168 55 6 1155 2130 119 19 9 chrX 74797197 74797519 -91852777 - ORR1A3 LTR MaLR -1 325 1 6 1155 561 280 0 116 chrX 74797519 74797580 -91852716 - B4A SINE B4 -238 54 1 6 1155 584 264 109 51 chrX 74799815 74800090 -91850206 - B4A SINE B4 0 292 2 6 1155 26 30 0 0 chrX 74800156 74800189 -91850107 + AT_rich Low_complexity Low_complexity 1 33 0 6 1155 22 0 0 0 chrX 74800844 74800866 -91849430 + AT_rich Low_complexity Low_complexity 1 22 0 6 1155 564 29 0 0 chrX 74800906 74800976 -91849320 + (TG)n Simple_repeat Simple_repeat 2 71 0 6 1155 620 302 38 11 chrX 74800979 74801163 -91849133 - B4 SINE B4 -103 189 1 6 1155 439 273 82 51 chrX 74802244 74802402 -91847894 + RSINE1 SINE B4 3 165 0 6 1155 1143 62 0 7 chrX 74802452 74802599 -91847697 + B1_Mus2 SINE Alu 2 147 0 6 1155 356 292 11 39 chrX 74802685 74802863 -91847433 + CT-rich Low_complexity Low_complexity 1 173 0 6 1155 317 233 28 56 chrX 74802876 74803006 -91847290 + MTE2a LTR MaLR 241 374 -5 6 1155 356 313 44 7 chrX 74803052 74803187 -91847109 - L1M4 LINE L1 -378 5796 5657 6 1155 1685 196 86 66 chrX 74803202 74803540 -91846756 + MTC LTR MaLR 20 367 -54 6 1155 704 84 0 70 chrX 74803540 74803668 -91846628 - L1_Mus2 LINE L1 0 6566 6448 6 1155 1685 196 86 66 chrX 74803668 74803723 -91846573 + MTC LTR MaLR 368 421 0 6 1155 230 351 58 44 chrX 74804300 74804437 -91845859 - ID_B1 SINE B4 -71 153 15 6 1155 216 0 0 0 chrX 74804459 74804483 -91845813 + (TGG)n Simple_repeat Simple_repeat 1 24 0 6 1155 254 292 28 0 chrX 74804487 74804559 -91845737 - ID4 SINE ID -9 74 1 6 1155 336 245 28 13 chrX 74805609 74805710 -91844586 - ORR1D2 LTR MaLR -14 405 287 6 1155 738 281 7 9 chrX 74806033 74806205 -91844091 - ORR1D2 LTR MaLR -215 163 3 6 1155 1309 154 32 16 chrX 74806523 74806773 -91843523 + RLTR1 LTR ERV1 371 624 0 6 1155 21 0 0 0 chrX 74807192 74807213 -91843083 + AT_rich Low_complexity Low_complexity 1 21 0 6 1155 223 255 140 60 chrX 74808715 74808815 -91841481 + PB1D7 SINE Alu 12 119 -1 6 1155 858 232 20 44 chrX 74809559 74809762 -91840534 - ID_B1 SINE B4 -24 200 3 6 1155 369 171 0 0 chrX 74809911 74809999 -91840297 + CT-rich Low_complexity Low_complexity 2 89 0 6 1155 351 0 0 0 chrX 74810000 74810039 -91840257 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1155 26 30 0 0 chrX 74810545 74810578 -91839718 + AT_rich Low_complexity Low_complexity 1 33 0 6 1155 1758 86 58 0 chrX 74810578 74810835 -91839461 - L1_Mus3 LINE L1 -8 6630 6359 6 1155 304 254 186 17 chrX 74810941 74811113 -91839183 + RLTR21 LTR ERVK 1039 1239 -333 6 1155 383 342 182 10 chrX 74811088 74811286 -91839010 - B4A SINE B4 -2 290 59 6 1155 755 259 6 30 chrX 74811336 74811503 -91838793 - B3A SINE B2 -35 163 1 6 1155 455 263 98 0 chrX 74811546 74811679 -91838617 - RSINE1 SINE B4 -8 157 12 6 1155 623 147 128 8 chrX 74811953 74812070 -91838226 + B1_Mus2 SINE Alu 11 141 -6 6 1155 462 285 69 7 chrX 74812070 74812098 -91838198 + B4 SINE B4 96 249 -43 6 1155 217 163 0 104 chrX 74812168 74812216 -91838080 + B3A SINE B2 13 55 -143 6 1155 949 197 81 0 chrX 74812505 74812703 -91837593 - B3 SINE B2 -2 214 1 6 1155 969 247 185 9 chrX 74812751 74813070 -91837226 + MTE2b LTR MaLR 1 375 -4 6 1155 829 333 63 26 chrX 74813708 74813979 -91836317 + B4A SINE B4 12 292 0 6 1155 459 0 0 0 chrX 74814543 74814594 -91835702 + (GA)n Simple_repeat Simple_repeat 1 51 0 6 1155 21 0 0 0 chrX 74814892 74814913 -91835383 + AT_rich Low_complexity Low_complexity 1 21 0 6 1155 546 229 78 78 chrX 74814936 74815102 -91835194 - B3 SINE B2 -41 175 10 6 1155 437 341 40 70 chrX 74815160 74815359 -91834937 - B4A SINE B4 -95 197 5 6 1155 669 260 14 0 chrX 74815461 74815607 -91834689 + B1F1 SINE Alu 2 149 0 6 1155 363 256 63 47 chrX 74816875 74817002 -91833294 + MLT1D LTR MaLR 3 131 -374 6 1155 318 305 32 0 chrX 74817599 74817694 -91832602 - RSINE1 SINE B4 0 165 68 6 1155 323 193 68 68 chrX 74817741 74817858 -91832438 - PB1D10 SINE Alu 0 117 1 6 1155 274 178 40 40 chrX 74818859 74818935 -91831361 - ORR1D1 LTR MaLR -135 239 164 6 1155 413 225 0 0 chrX 74819086 74819157 -91831139 - ID4_ SINE ID -10 73 3 6 1155 360 267 92 25 chrX 74819164 74819283 -91831013 - PB1 SINE Alu 0 127 1 6 1155 436 286 113 15 chrX 74819505 74819785 -91830511 + ORR1E LTR MaLR 1 335 -44 6 1155 886 264 35 15 chrX 74819820 74820020 -91830276 - B3 SINE B2 -7 209 6 6 1155 426 211 100 0 chrX 74820153 74820243 -91830053 - B4A SINE B4 -192 100 2 6 1155 532 268 139 43 chrX 74820738 74820968 -91829328 - MLT1D LTR MaLR 0 505 254 6 1155 408 136 56 11 chrX 74821214 74821303 -91828993 - RMER17D LTR ERVK -391 498 406 6 1155 1768 143 101 42 chrX 74821946 74822303 -91827993 - ORR1C1 LTR MaLR 0 378 1 6 1155 774 231 158 11 chrX 74823335 74823519 -91826777 + B3 SINE B2 1 211 -5 7 1155 432 279 77 8 chrX 74824204 74824334 -91825962 + B1F2 SINE Alu 2 140 -9 7 1155 653 293 52 24 chrX 74824361 74824574 -91825722 + ID_B1 SINE B4 4 222 -2 7 1155 413 228 0 12 chrX 74824591 74824671 -91825625 + ID4 SINE ID 4 82 -1 7 1155 462 198 0 34 chrX 74824825 74824914 -91825382 + U1 snRNA snRNA 1 86 -79 7 1155 749 215 101 6 chrX 74825777 74825955 -91824341 + B3A SINE B2 3 197 -1 7 1155 314 310 11 11 chrX 74826130 74826218 -91824078 + B4A SINE B4 46 133 -159 7 1155 189 121 0 0 chrX 74826249 74826282 -91824014 + (GA)n Simple_repeat Simple_repeat 2 34 0 7 1155 258 32 0 0 chrX 74826387 74826418 -91823878 + (T)n Simple_repeat Simple_repeat 1 31 0 7 1155 982 97 40 40 chrX 74826418 74826568 -91823728 - B1_Mur4 SINE Alu 0 150 1 7 1155 225 283 0 16 chrX 74826606 74826667 -91823629 - PB1D7 SINE Alu -1 119 60 7 1155 694 307 120 57 chrX 74827625 74828201 -91822095 - Tigger7 DNA MER2_type -2172 319 1 7 1155 396 300 77 21 chrX 74828201 74828342 -91821954 - MER20 DNA MER1_type -65 154 6 7 1155 779 170 57 180 chrX 74828367 74828611 -91821685 + B3 SINE B2 2 215 -1 7 1155 503 333 0 0 chrX 74828630 74828744 -91821552 - ORR1E LTR MaLR -228 131 18 7 1155 249 33 0 0 chrX 74829178 74829208 -91821088 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 1155 428 269 21 67 chrX 74829382 74829532 -91820764 - PB1D10 SINE Alu -18 129 2 7 1155 369 0 0 0 chrX 74830271 74830312 -91819984 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 7 1155 285 303 46 31 chrX 74831270 74831464 -91818832 - L1MB7 LINE L1 -47 6137 5941 7 1155 242 307 0 0 chrX 74831947 74832022 -91818274 + (CA)n Simple_repeat Simple_repeat 2 76 0 7 1155 1202 248 10 44 chrX 74832743 74833038 -91817258 - B4A SINE B4 -5 287 3 7 1155 716 222 69 40 chrX 74833041 74833243 -91817053 - L1M2 LINE L1 -694 5606 5399 7 1155 378 115 0 0 chrX 74833255 74833316 -91816980 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 7 1155 4424 201 65 40 chrX 74833330 74833782 -91816514 - Lx7 LINE L1 0 7696 7205 7 1155 396 0 0 0 chrX 74833782 74833826 -91816470 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1155 1089 87 0 14 chrX 74833827 74833967 -91816329 - B1_Mus2 SINE Alu -9 138 1 7 1155 4424 201 65 40 chrX 74833967 74834550 -91815746 - Lx7 LINE L1 -492 7204 6632 7 1155 833 274 36 31 chrX 74834748 74834970 -91815326 + B4A SINE B4 64 286 -6 7 1155 351 0 0 0 chrX 74834975 74835014 -91815282 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1155 802 283 56 35 chrX 74835167 74835453 -91814843 + B4A SINE B4 1 292 0 7 1155 976 252 47 31 chrX 74836216 74836470 -91813826 + B4 SINE B4 10 267 -25 7 1155 992 124 21 0 chrX 74836605 74836750 -91813546 - B1_Mus1 SINE Alu 0 148 1 7 1155 356 148 66 0 chrX 74837506 74837567 -91812729 + B4A SINE B4 161 225 -67 7 1155 1618 6 0 0 chrX 74837567 74837745 -91812551 + L1Md_T LINE L1 6405 6582 0 7 1155 449 310 22 73 chrX 74838385 74838521 -91811775 - RSINE1 SINE B4 0 165 37 7 1155 637 260 141 30 chrX 74839037 74839235 -91811061 + ID_B1 SINE B4 1 220 -4 7 1155 528 363 88 8 chrX 74839247 74839497 -91810799 + B4A SINE B4 9 278 -14 7 1155 229 228 236 0 chrX 74840757 74840876 -91809420 + MIRc SINE MIR 35 183 -85 7 144 348 295 546 16 chrX 74841939 74842126 -91808170 - B4 SINE B4 -4 288 3 7 1156 666 233 47 0 chrX 74842164 74842293 -91808003 + RSINE1 SINE B4 2 136 -29 7 1156 803 286 104 15 chrX 74842350 74842609 -91807687 + B4A SINE B4 1 282 -10 7 1156 667 248 93 0 chrX 74842697 74842858 -91807438 - B3A SINE B2 -16 182 7 7 1156 558 263 29 7 chrX 74843157 74843295 -91807001 + ID_B1 SINE B4 77 217 -7 7 1156 2201 207 67 18 chrX 74843307 74843741 -91806555 + Lx6 LINE L1 6946 7400 -60 7 1156 321 26 0 0 chrX 74843741 74843779 -91806517 + (GAAA)n Simple_repeat Simple_repeat 1 38 0 7 1156 389 198 8 97 chrX 74843779 74843913 -91806383 + Lx6 LINE L1 7328 7449 -11 7 1156 186 209 0 0 chrX 74844010 74844053 -91806243 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 7 1156 377 303 78 0 chrX 74844147 74844289 -91806007 + MER20 DNA MER1_type 46 198 -21 7 1156 484 272 149 57 chrX 74845207 74845488 -91804808 - MER2 DNA MER2_type -30 315 9 7 1156 194 216 0 105 chrX 74846555 74846612 -91803684 + L2 LINE L2 2523 2573 -846 7 1156 399 333 93 7 chrX 74846700 74846839 -91803457 + MER20 DNA MER1_type 14 164 -55 7 1156 831 303 94 4 chrX 74847182 74847447 -91802849 + B4A SINE B4 1 289 -3 7 1156 1351 238 99 123 chrX 74847943 74848528 -91801768 + RMER15 LTR ERVL 1 571 -4 7 1156 222 328 0 56 chrX 74848716 74848787 -91801509 - ID4 SINE ID -1 82 16 7 1156 363 278 27 18 chrX 74849208 74849318 -91800978 - Tigger5 DNA MER2_type 0 2406 2296 7 1156 851 281 88 20 chrX 74849322 74849627 -91800669 - MLT1A0 LTR MaLR 0 365 40 7 1156 720 280 109 54 chrX 74850385 74850661 -91799635 - B4 SINE B4 0 292 2 7 1156 636 221 185 5 chrX 74850746 74850951 -91799345 + Tigger2b DNA MER2_type 3 244 -482 7 1156 1210 207 84 90 chrX 74851036 74851381 -91798915 + MTD LTR MaLR 15 357 -62 7 1156 3995 60 44 0 chrX 74851486 74851967 -91798329 - L1_Mus1 LINE L1 -1 6566 6065 7 1156 378 0 0 0 chrX 74852452 74852494 -91797802 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1156 285 333 95 0 chrX 74852498 74852603 -91797693 - B4A SINE B4 -18 274 160 7 1156 364 252 24 82 chrX 74853303 74853420 -91796876 - ID_B1 SINE B4 -94 198 84 7 1156 638 223 167 12 chrX 74853442 74853610 -91796686 - B3 SINE B2 -8 208 15 7 1156 210 191 203 16 chrX 74854946 74855010 -91795286 + PB1D10 SINE Alu 42 117 0 7 1156 779 273 68 86 chrX 74855613 74855905 -91794391 - B4A SINE B4 0 292 6 7 1156 375 304 25 50 chrX 74856007 74856128 -91794168 + B3 SINE B2 99 216 0 7 1156 416 264 47 0 chrX 74856405 74856511 -91793785 - Tigger7 DNA MER2_type -2073 418 308 7 1156 1585 184 78 26 chrX 74856592 74856938 -91793358 + MT2A LTR ERVL 168 531 -2 7 1156 203 292 45 15 chrX 74857033 74857099 -91793197 - L2b LINE L2 0 3375 3308 7 1156 808 249 20 93 chrX 74857253 74857501 -91792795 - MTE2a LTR MaLR 0 379 150 7 1156 630 286 121 80 chrX 74857655 74858020 -91792276 - RMER13A LTR ERVK -39 821 442 7 1156 1146 203 59 35 chrX 74858006 74858261 -91792035 - RMER13A LTR ERVK -599 261 1 7 1156 280 271 113 10 chrX 74858263 74858360 -91791936 - MTE2a LTR MaLR -310 109 3 7 1156 215 252 153 72 chrX 74858379 74858490 -91791806 - PB1D7 SINE Alu 0 120 1 7 1156 382 308 101 31 chrX 74859399 74859687 -91790609 - L1MC3 LINE L1 -295 7490 7183 7 1156 736 238 0 20 chrX 74859874 74860024 -91790272 - B4 SINE B4 -16 276 130 7 1156 1647 226 33 19 chrX 74860831 74861196 -91789100 - ORR1D1 LTR MaLR -4 370 1 7 1156 239 209 0 0 chrX 74861355 74861398 -91788898 - L1M5 LINE L1 -520 5604 5562 7 1156 846 330 32 14 chrX 74861930 74862210 -91788086 + B4A SINE B4 1 285 -7 7 1156 348 119 0 0 chrX 74862584 74862643 -91787653 + (TG)n Simple_repeat Simple_repeat 2 60 0 7 1156 639 266 88 69 chrX 74862669 74862931 -91787365 - B4 SINE B4 -22 270 4 7 1156 867 186 21 0 chrX 74863574 74863719 -91786577 - B1_Mur4 SINE Alu -1 149 2 7 1156 1090 168 115 72 chrX 74863923 74864296 -91786000 - Lx7 LINE L1 0 7696 7308 7 1156 381 22 0 0 chrX 74864352 74864398 -91785898 + (CACCC)n Simple_repeat Simple_repeat 3 48 0 7 1156 424 288 163 55 chrX 74864413 74864670 -91785626 - B4A SINE B4 -6 286 2 7 1156 24 0 0 0 chrX 74864813 74864837 -91785459 + AT_rich Low_complexity Low_complexity 1 24 0 7 1156 517 285 115 43 chrX 74864999 74865196 -91785100 + B4A SINE B4 85 292 0 7 1156 936 228 48 10 chrX 74865448 74865656 -91784640 + B3 SINE B2 1 216 0 7 1156 802 253 62 0 chrX 74865677 74865871 -91784425 + B3 SINE B2 1 206 -10 7 1156 348 276 49 54 chrX 74866243 74866427 -91783869 + Charlie5 DNA MER1_type 2300 2482 -142 7 1156 367 258 54 43 chrX 74866407 74866500 -91783796 - PB1D10 SINE Alu -3 114 21 7 1156 287 325 41 8 chrX 74867674 74867795 -91782501 + Cheshire DNA MER1_type 150 274 -2146 7 1156 584 260 20 40 chrX 74867842 74867994 -91782302 + B1F1 SINE Alu 1 149 0 7 1156 213 39 0 0 chrX 74868122 74868148 -91782148 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 1156 315 0 0 0 chrX 74868385 74868420 -91781876 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1156 338 312 120 48 chrX 74868616 74868659 -91781637 - B4A SINE B4 -23 269 226 7 1156 1205 82 0 0 chrX 74868659 74868806 -91781490 - B1_Mus1 SINE Alu 0 148 2 7 1156 338 312 120 48 chrX 74868806 74868971 -91781325 - B4A SINE B4 -67 225 46 7 1156 270 0 0 0 chrX 74869579 74869609 -91780687 + (TG)n Simple_repeat Simple_repeat 2 31 0 7 1156 307 299 44 132 chrX 74869634 74869838 -91780458 + B4A SINE B4 107 292 0 7 1156 369 332 67 82 chrX 74870402 74870684 -91779612 - B4 SINE B4 -13 279 2 7 1156 450 323 76 8 chrX 74871215 74871346 -91778950 - RSINE1 SINE B4 -2 163 24 7 1156 330 359 57 5 chrX 74872138 74872348 -91777948 + MER58A DNA MER1_type 2 222 -2 7 1156 291 225 2 0 chrX 74872415 74872478 -91777818 - MTEb LTR MaLR -23 356 293 8 1156 269 326 11 0 chrX 74872696 74872788 -91777508 - MLT2B3 LTR ERVL -457 97 5 8 1156 320 283 126 51 chrX 74872818 74872993 -91777303 + ORR1E LTR MaLR 6 193 -166 8 1156 520 86 0 0 chrX 74873210 74873280 -91777016 - B1_Mur4 SINE Alu -80 70 1 8 1156 830 253 174 21 chrX 74873309 74873691 -91776605 - RCHARR1 DNA MER1_type -534 440 1 8 1156 535 235 163 60 chrX 74874173 74874504 -91775792 + L1MB5 LINE L1 5809 6173 -1 8 1156 613 295 42 6 chrX 74874912 74875079 -91775217 + B4A SINE B4 118 290 -2 8 1156 239 369 73 29 chrX 74875277 74875414 -91774882 + ID_B1 SINE B4 29 171 -53 8 1156 324 307 55 0 chrX 74875338 74875440 -91774856 + PB1D10 SINE Alu 13 116 -1 8 1156 279 259 103 23 chrX 74875748 74875835 -91774461 + PB1D10 SINE Alu 22 115 -2 8 1156 292 167 0 0 chrX 74876329 74876377 -91773919 - ORR1D1 LTR MaLR -2 372 325 8 1156 833 264 36 5 chrX 74876382 74876576 -91773720 - B4 SINE B4 -91 201 2 8 1156 300 27 0 0 chrX 74876760 74876797 -91773499 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 1156 772 246 86 10 chrX 74877221 74877418 -91772878 - B3 SINE B2 -4 212 1 8 1156 426 270 93 81 chrX 74878029 74878190 -91772106 + RSINE1 SINE B4 2 164 -1 8 1156 244 360 13 0 chrX 74879559 74879634 -91770662 + ID SINE ID 3 78 -146 8 1156 926 194 35 6 chrX 74879807 74879978 -91770318 + B3 SINE B2 40 215 -1 8 1156 285 370 31 0 chrX 74880007 74880169 -91770127 + L1M4 LINE L1 5559 5725 -459 8 1156 231 339 32 8 chrX 74880334 74880459 -91769837 - MLT1A1 LTR MaLR -12 396 269 8 1156 369 292 31 10 chrX 74880986 74881083 -91769213 + B4A SINE B4 1 99 -193 8 1156 533 351 11 11 chrX 74881236 74881426 -91768870 + B4A SINE B4 100 289 -3 8 1156 483 227 54 9 chrX 74881478 74881589 -91768707 + PB1D10 SINE Alu 1 116 -1 8 1156 349 307 44 0 chrX 74881712 74881826 -91768470 + ORR1E LTR MaLR 7 125 -234 8 1156 23 0 0 0 chrX 74882274 74882297 -91767999 + AT_rich Low_complexity Low_complexity 1 23 0 8 1156 713 262 116 24 chrX 74882539 74882789 -91767507 - B4A SINE B4 -18 274 2 8 1156 342 0 0 0 chrX 74885496 74885534 -91764762 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 1156 701 285 79 25 chrX 74885548 74885789 -91764507 - MTE2a LTR MaLR -41 338 85 8 1156 1864 229 150 18 chrX 74885792 74886351 -91763945 + RMER1C Other Other 706 1338 -4 8 1156 232 330 52 31 chrX 74886351 74886448 -91763848 - MTE2a LTR MaLR -299 120 22 8 1156 219 250 0 0 chrX 74886449 74886497 -91763799 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 8 1156 247 203 115 33 chrX 74886577 74886638 -91763658 + ID4 SINE ID 8 73 -10 8 1156 607 282 112 11 chrX 74886864 74886883 -91763413 - B3A SINE B2 -1 197 179 8 1156 207 0 0 0 chrX 74886883 74886906 -91763390 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 8 1156 1158 101 6 0 chrX 74886906 74887065 -91763231 - B2_Mm1t SINE B2 -33 160 1 8 1156 520 261 10 4 chrX 74887297 74887406 -91762890 + B1_Mur3 SINE Alu 1 106 -14 8 1156 553 240 220 28 chrX 74887685 74887969 -91762327 - MLT1C LTR MaLR -73 394 58 8 1156 477 349 33 68 chrX 74888009 74888375 -91761921 - ORR1E LTR MaLR -2 357 5 8 1156 349 275 11 0 chrX 74888452 74888543 -91761753 + B4A SINE B4 2 93 -199 8 1156 1535 240 123 42 chrX 74889283 74889788 -91760508 - Lx8 LINE L1 -420 7053 6508 8 1156 850 284 5 0 chrX 74890201 74890409 -91759887 - B3 SINE B2 -5 211 3 8 1156 362 339 26 21 chrX 74891062 74891255 -91759041 - MER20 DNA MER1_type 0 219 26 8 1156 195 69 0 0 chrX 74891669 74891698 -91758598 + (CAG)n Simple_repeat Simple_repeat 3 31 0 8 1156 1187 234 107 51 chrX 74896905 74897278 -91753018 - RMER15 LTR ERVL -140 435 42 8 1156 293 231 0 15 chrX 74897307 74897373 -91752923 - RMER15 LTR ERVL -510 65 1 8 1156 402 246 109 0 chrX 74897660 74897770 -91752526 + B1F SINE Alu 18 139 -10 8 1156 566 268 201 0 chrX 74898838 74899047 -91751249 - MER2 DNA MER2_type -3 342 92 8 1156 464 236 98 0 chrX 74899089 74899212 -91751084 - B1_Mur1 SINE Alu -8 141 7 8 1156 219 240 89 51 chrX 74899528 74899607 -91750689 - ID4 SINE ID -1 82 1 8 1156 22 35 0 0 chrX 74900252 74900281 -91750015 + AT_rich Low_complexity Low_complexity 1 29 0 8 1156 248 188 188 0 chrX 74901609 74901678 -91748618 - ID4 SINE ID 0 83 2 8 1156 313 232 119 23 chrX 74902290 74902419 -91747877 - B1F SINE Alu 0 149 10 8 1156 435 19 0 0 chrX 74902438 74902490 -91747806 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 1156 2205 182 134 33 chrX 74902829 74903313 -91746983 - MT2A LTR ERVL 0 533 1 8 1156 450 309 39 17 chrX 74904404 74904585 -91745711 + MER20 DNA MER1_type 31 215 -4 8 1156 316 200 164 144 chrX 74908418 74908564 -91741732 - MTEb LTR MaLR -16 363 215 8 1156 631 266 47 97 chrX 74908985 74909264 -91741032 - RMER12 LTR ERVK -100 1222 958 8 1156 183 80 0 0 chrX 74909282 74909307 -91740989 + (CATA)n Simple_repeat Simple_repeat 2 26 0 8 1156 400 265 22 43 chrX 74909307 74909445 -91740851 - RMER12B LTR ERVK -144 1260 1126 8 1156 1378 148 46 118 chrX 74910139 74910485 -91739811 - ORR1A4 LTR MaLR -8 321 1 8 1156 1201 62 0 0 chrX 74911996 74912141 -91738155 + B1_Mus1 SINE Alu 2 146 -2 8 1156 206 103 0 49 chrX 74912147 74912188 -91738108 + A-rich Low_complexity Low_complexity 4 42 0 8 1156 4174 150 99 79 chrX 74912402 74913407 -91736889 + RLTR25B LTR ERVK 1 1026 -2 8 1156 310 284 11 0 chrX 74914151 74914246 -91736050 + MurSAT1 Satellite Satellite 1 96 -24 8 1156 1674 154 25 31 chrX 74914442 74914763 -91735533 - ORR1A2 LTR MaLR -8 319 1 8 1156 328 250 0 0 chrX 74914904 74914972 -91735324 - B1_Mur4 SINE Alu -43 107 40 8 1156 381 93 0 0 chrX 74915041 74915095 -91735201 + (CATA)n Simple_repeat Simple_repeat 1 54 0 8 1156 275 206 21 32 chrX 74915523 74915618 -91734678 + (TTTG)n Simple_repeat Simple_repeat 3 96 0 8 1156 2051 159 17 6 chrX 74915723 74916078 -91734218 - RLTR15 LTR ERVK 0 359 1 8 1156 1406 253 105 20 chrX 74916132 74916647 -91733649 - ORR1A2-int LTR MaLR -980 600 5 8 1156 903 277 104 40 chrX 74916653 74916999 -91733297 - ORR1A2 LTR MaLR -2 368 1 8 1156 623 257 189 68 chrX 74917093 74917552 -91732744 + RMER5 LTR ERV1 20 534 0 8 1156 372 22 0 0 chrX 74917816 74917861 -91732435 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 8 1156 2901 77 0 35 chrX 74917909 74918315 -91731981 + L1Md_F2 LINE L1 6191 6582 0 8 1156 763 141 195 26 chrX 74918380 74918570 -91731726 - URR1B DNA MER1_type 0 225 4 8 1156 749 161 65 14 chrX 74918813 74918952 -91731344 + B1_Mus1 SINE Alu 2 147 -1 8 1156 827 70 0 9 chrX 74918956 74919072 -91731224 + (GGA)n Simple_repeat Simple_repeat 3 117 0 8 1156 251 182 18 18 chrX 74921079 74921135 -91729161 + PB1D9 SINE Alu 65 120 0 8 1156 1615 17 22 0 chrX 74921167 74921348 -91728948 + B2_Mm1a SINE B2 2 186 -7 8 1156 27 49 0 0 chrX 74921353 74921394 -91728902 + AT_rich Low_complexity Low_complexity 1 41 0 8 1156 282 361 0 0 chrX 74921730 74921827 -91728469 - PB1D9 SINE Alu -22 98 2 8 1156 22 0 0 0 chrX 74921836 74921858 -91728438 + AT_rich Low_complexity Low_complexity 1 22 0 8 1156 549 169 472 0 chrX 74921900 74922042 -91728254 - B3 SINE B2 -6 210 2 8 1156 23 33 0 0 chrX 74922044 74922074 -91728222 + AT_rich Low_complexity Low_complexity 1 30 0 8 1156 1460 73 16 5 chrX 74922732 74922925 -91727371 + B2_Mm2 SINE B2 1 195 0 8 1156 300 75 91 36 chrX 74922951 74923006 -91727290 + B1_Mus2 SINE Alu 2 59 -88 8 1156 395 0 0 162 chrX 74923014 74923805 -91726491 + (CAGAG)n Simple_repeat Simple_repeat 1 662 0 8 1156 260 148 112 56 chrX 74923806 74923913 -91726383 + RLTR25B LTR ERVK 397 509 -519 8 1156 796 19 0 19 chrX 74923850 74923958 -91726338 + B1_Mm SINE Alu 42 147 0 8 1156 741 122 0 0 chrX 74923959 74924074 -91726222 + (GAAAA)n Simple_repeat Simple_repeat 2 116 0 8 1156 265 304 0 0 chrX 74924356 74924425 -91725871 - ID4_ SINE ID -9 74 6 8 1156 342 49 49 0 chrX 74924477 74924538 -91725758 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 8 1156 1118 81 0 7 chrX 74924570 74924719 -91725577 + B1_Mus1 SINE Alu 1 148 0 8 1156 2207 158 73 8 chrX 74924844 74925239 -91725057 + MTC LTR MaLR 1 421 0 8 1156 2287 162 15 61 chrX 74925507 74925968 -91724328 + RLTR31A_Mm LTR ERVK 1 440 -144 8 1156 767 229 0 0 chrX 74926392 74926536 -91723760 + B1_Mus2 SINE Alu 1 144 -3 8 1156 526 285 25 25 chrX 74926558 74926720 -91723576 - RSINE1 SINE B4 0 165 4 8 1156 12623 58 10 4 chrX 74926799 74929091 -91721205 - L1Md_F2 LINE L1 -2 6580 4274 8 1156 23902 108 41 28 chrX 74929107 74933643 -91716653 - L1Md_T LINE L1 0 6582 1978 8 1156 234 0 0 0 chrX 74933643 74933669 -91716627 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 8 1156 23902 130 53 35 chrX 74933669 74933761 -91716535 - L1Md_T LINE L1 -3906 1977 1880 8 1156 6408 62 5 0 chrX 74933761 74934562 -91715734 + L1Md_F2 LINE L1 5778 6582 0 8 1156 23902 117 70 18 chrX 74934562 74935803 -91714493 - L1Md_T LINE L1 -4004 1879 578 8 1156 262 362 63 39 chrX 74935972 74936179 -91714117 - ORR1D2 LTR MaLR -127 243 32 8 1156 379 254 87 0 chrX 74936226 74936364 -91713932 + L1MB3 LINE L1 5902 6051 -132 8 1156 1160 62 0 14 chrX 74937044 74937191 -91713105 + B1_Mm SINE Alu 1 145 -2 8 1156 890 167 0 0 chrX 74937237 74937381 -91712915 + B1_Mur3 SINE Alu 6 149 0 8 1156 317 125 0 18 chrX 74937817 74937874 -91712422 + (CCCCCT)n Simple_repeat Simple_repeat 2 57 0 8 1156 6357 152 47 32 chrX 74937997 74939162 -91711134 + Lx4B LINE L1 5865 7047 -11 9 1156 198 103 0 0 chrX 74939166 74939195 -91711101 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 9 1156 1759 208 55 22 chrX 74939586 74940039 -91710257 - Lx9 LINE L1 0 7644 7177 9 1156 288 262 0 16 chrX 74940693 74940755 -91709541 - ID4_ SINE ID -21 62 2 9 1156 4657 101 19 17 chrX 74940802 74941495 -91708801 - L1_Mus4 LINE L1 0 6636 5943 9 1156 2863 103 0 0 chrX 74941495 74941985 -91708311 + L1_Mus4 LINE L1 5474 5963 -673 9 1156 2147 136 47 53 chrX 74942277 74942657 -91707639 + ORR1C1 LTR MaLR 1 378 0 9 1156 699 234 26 14 chrX 74942816 74943049 -91707247 - ORR1D1 LTR MaLR 0 374 70 9 1156 1009 207 94 34 chrX 74943049 74943424 -91706872 + MT2A LTR ERVL 3 531 -70 9 1156 6179 169 64 32 chrX 74943938 74944293 -91706003 + MERVL_2A-int LTR ERVL 1 370 -5391 9 1156 852 181 277 0 chrX 74944293 74944459 -91705837 + B3 SINE B2 5 216 0 9 1156 6179 169 64 32 chrX 74944459 74945298 -91704998 + MERVL_2A-int LTR ERVL 371 1233 -4528 9 1156 16986 149 45 11 chrX 74945299 74945627 -91704669 + MERVL_2A-int LTR ERVL 2033 2379 -3382 9 1156 3578 61 7 2 chrX 74945627 74946053 -91704243 + L1_Mus1 LINE L1 6124 6551 -16 9 1156 198 0 0 0 chrX 74946058 74946080 -91704216 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 9 1156 16986 149 45 11 chrX 74946080 74948478 -91701818 + MERVL_2A-int LTR ERVL 2380 4858 -903 9 1156 974 287 16 84 chrX 74948526 74948967 -91701329 + MYSERV6-int LTR ERVK 8256 8666 -293 9 1156 1088 121 44 0 chrX 74949128 74949310 -91700986 + URR1A DNA MER1_type 37 226 0 9 1156 1061 67 89 0 chrX 74949688 74949823 -91700473 - B1_Mus2 SINE Alu 0 147 1 9 1156 274 306 86 71 chrX 74949963 74950160 -91700136 + MER52-int LTR ERV1 5861 6060 -1031 9 1156 4116 196 48 173 chrX 74952527 74954429 -91695867 + Lx6 LINE L1 2730 3826 -2054 9 1156 3586 205 62 47 chrX 74954470 74955675 -91694621 - RMER1A Other Other -1 1029 1 9 1156 3036 47 47 0 chrX 74955865 74956256 -91694040 + L1Md_F2 LINE L1 6188 6582 0 9 1156 30 0 0 0 chrX 74956372 74956402 -91693894 + AT_rich Low_complexity Low_complexity 1 30 0 9 1156 1493 76 16 0 chrX 74957058 74957242 -91693054 + B2_Mm2 SINE B2 1 187 -8 9 1156 890 156 49 21 chrX 74957396 74957540 -91692756 + B1_Mur3 SINE Alu 1 148 -1 9 1156 22 56 0 0 chrX 74957585 74957621 -91692675 + AT_rich Low_complexity Low_complexity 1 36 0 9 1156 1251 123 0 5 chrX 74957676 74957853 -91692443 - URR1A DNA MER1_type 0 226 51 9 1156 640 189 8 32 chrX 74957853 74957979 -91692317 + B2_Mm2 SINE B2 2 124 -71 9 1156 862 206 134 75 chrX 74958551 74958585 -91691711 - MT2A LTR ERVL 0 601 553 9 1156 210 37 0 0 chrX 74958585 74958612 -91691684 + (TA)n Simple_repeat Simple_repeat 1 27 0 9 1156 405 0 0 0 chrX 74958612 74958656 -91691640 + (CA)n Simple_repeat Simple_repeat 2 46 0 9 1156 1214 206 152 113 chrX 74958656 74959114 -91691182 - MT2A LTR ERVL -49 552 3 9 1156 340 55 0 0 chrX 74960153 74960208 -91690088 - Lx LINE L1 0 6654 6600 9 1156 3581 184 100 35 chrX 74960511 74960631 -91689665 - RMER1A Other Other -3 1027 879 9 1156 210 71 0 0 chrX 74960631 74960659 -91689637 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 1156 3581 184 100 35 chrX 74960659 74961365 -91688931 - RMER1A Other Other -152 878 148 9 1156 660 118 35 52 chrX 74961463 74961579 -91688717 - B1_Mus1 SINE Alu 0 148 35 9 1156 259 115 28 141 chrX 74961517 74961588 -91688708 - 4.5SRNA scRNA scRNA -8 86 24 9 1156 333 118 0 0 chrX 74961788 74961839 -91688457 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 9 1156 198 103 0 0 chrX 74962251 74962280 -91688016 + (A)n Simple_repeat Simple_repeat 1 29 0 9 1156 249 294 0 0 chrX 74962319 74962411 -91687885 + (CAT)n Simple_repeat Simple_repeat 3 94 0 9 1156 477 83 24 12 chrX 74962431 74962516 -91687780 + (TCC)n Simple_repeat Simple_repeat 3 88 0 9 1156 1194 43 0 48 chrX 74962835 74962981 -91687315 + B1_Mus2 SINE Alu 2 140 -7 9 1156 342 0 0 0 chrX 74963656 74963694 -91686602 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 9 1156 662 86 267 0 chrX 74963698 74963803 -91686493 - B1_Mus1 SINE Alu -14 134 2 9 1156 2875 21 0 3 chrX 74964096 74964427 -91685869 + L1Md_F2 LINE L1 5674 6003 -581 9 1156 2016 31 0 0 chrX 74964427 74964651 -91685645 + L1Md_T LINE L1 6358 6581 -1 9 1156 5030 38 2 9 chrX 74964650 74965230 -91685066 + L1Md_F2 LINE L1 6005 6580 -2 9 1156 276 256 0 58 chrX 74966331 74966418 -91683878 + B1_Mur1 SINE Alu 27 108 -41 9 1156 685 188 303 0 chrX 74966606 74966771 -91683525 + B3 SINE B2 2 216 0 9 1156 196 47 116 0 chrX 74967243 74967286 -91683010 + T-rich Low_complexity Low_complexity 3 50 0 9 1156 189 74 0 0 chrX 74967339 74967366 -91682930 + (TC)n Simple_repeat Simple_repeat 1 27 0 9 1156 437 298 9 0 chrX 74967381 74967495 -91682801 - B3 SINE B2 -99 117 3 9 1156 331 319 94 0 chrX 74968029 74968167 -91682129 - RSINE1 SINE B4 0 165 15 9 1156 350 258 39 3 chrX 74968198 74968303 -91681993 - B1_Mur4 SINE Alu 0 117 2 9 1156 459 0 0 0 chrX 74968348 74968399 -91681897 + (TG)n Simple_repeat Simple_repeat 1 51 0 9 1156 306 0 0 0 chrX 74968399 74968432 -91681864 + (GA)n Simple_repeat Simple_repeat 1 34 0 9 1156 556 276 16 0 chrX 74968437 74968560 -91681736 - B1_Mus2 SINE Alu -20 127 3 9 1156 282 308 83 90 chrX 74969902 74970109 -91680187 + MLT1F2 LTR MaLR 219 503 -177 9 1156 5146 109 22 3 chrX 74970110 74971305 -91678991 + L1Md_F LINE L1 411 1632 -4251 9 1156 305 130 0 0 chrX 74971301 74971347 -91678949 + L1_Mur1 LINE L1 5508 5553 -333 9 1156 3385 57 22 7 chrX 74971350 74971755 -91678541 + RLTR10A LTR ERVK 1 411 0 9 1156 1955 145 14 56 chrX 74971757 74972238 -91678058 + IAP-d-int LTR ERVK 295 602 -1385 9 1156 2063 59 125 15 chrX 74972238 74972707 -91677589 + IAP-d-int LTR ERVK 5007 5527 -1015 9 1156 1663 60 9 0 chrX 74972714 74972929 -91677367 + IAP-d-int LTR ERVK 5668 5884 -658 9 144 5133 72 22 14 chrX 74972930 74973624 -91676672 + RLTR10-int LTR ERVK 1288 1986 -1 9 1157 3446 47 22 7 chrX 74973624 74974029 -91676267 + RLTR10A LTR ERVK 1 411 0 9 1157 7824 61 2 16 chrX 74974029 74975061 -91675235 + L1_Mus1 LINE L1 5548 6566 -1 9 1157 26 30 0 0 chrX 74975061 74975094 -91675202 + AT_rich Low_complexity Low_complexity 1 33 0 9 1157 3520 169 139 71 chrX 74975427 74976260 -91674036 + RMER19B LTR ERVK 1 890 -12 9 1157 232 279 136 24 chrX 74976275 74976400 -91673896 - MLT1D LTR MaLR -336 169 31 9 1157 426 121 0 0 chrX 74976973 74977039 -91673257 + (TA)n Simple_repeat Simple_repeat 1 66 0 9 1157 377 204 92 9 chrX 74977039 74977148 -91673148 - L1MB4 LINE L1 -28 6152 6035 9 1157 240 35 0 0 chrX 74977446 74977475 -91672821 + (TAA)n Simple_repeat Simple_repeat 1 29 0 9 1157 2110 140 11 70 chrX 74977810 74978095 -91672201 + MTC LTR MaLR 1 329 -92 9 1157 2086 95 87 11 chrX 74978095 74978382 -91671914 - RLTR27 LTR ERVK 0 309 1 9 1157 2110 119 0 62 chrX 74978382 74978447 -91671849 + MTC LTR MaLR 330 386 -35 9 1157 3102 95 27 0 chrX 74978447 74978857 -91671439 - BGLII LTR ERVK 0 421 1 9 1157 2110 140 11 69 chrX 74978857 74978887 -91671409 + MTC LTR MaLR 387 407 -14 9 1157 180 0 0 0 chrX 74978888 74978908 -91671388 + (T)n Simple_repeat Simple_repeat 1 20 0 9 1157 1662 116 4 9 chrX 74979261 74979488 -91670808 + URR1A DNA MER1_type 1 226 0 9 1157 1972 129 62 59 chrX 74980375 74980697 -91669599 - ORR1A4 LTR MaLR -2 327 5 9 1157 431 295 65 32 chrX 74981039 74981193 -91669103 - MER68-int LTR ERVL -403 2587 2429 9 1157 332 268 0 20 chrX 74981468 74981567 -91668729 - MER68-int LTR ERVL -930 2060 1964 9 1157 439 232 152 53 chrX 74981621 74981753 -91668543 - B1_Mur3 SINE Alu 0 149 5 9 1157 447 261 0 0 chrX 74981784 74981872 -91668424 + B3 SINE B2 1 88 -128 9 1157 371 279 108 0 chrX 74981893 74982022 -91668274 - MER68-int LTR ERVL -1104 1886 1744 9 1157 23 54 0 0 chrX 74982325 74982362 -91667934 + AT_rich Low_complexity Low_complexity 1 37 0 9 1157 23 0 0 0 chrX 74982405 74982428 -91667868 + AT_rich Low_complexity Low_complexity 1 23 0 9 1157 518 292 0 0 chrX 74983293 74983406 -91666890 + ID_B1 SINE B4 86 198 -26 9 1157 887 210 102 10 chrX 74983680 74983877 -91666419 - B3 SINE B2 0 216 2 9 1157 371 281 0 10 chrX 74984146 74984243 -91666053 - PB1D10 SINE Alu -13 104 9 9 1157 261 0 0 0 chrX 74984337 74984366 -91665930 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 1157 576 139 109 0 chrX 74984625 74984726 -91665570 - B1_Mus2 SINE Alu 0 147 36 9 1157 1243 69 0 0 chrX 74985091 74985236 -91665060 - B1_Mus1 SINE Alu -2 146 2 9 1157 5024 53 0 5 chrX 74985552 74986141 -91664155 - L1Md_F2 LINE L1 -5 6577 5992 9 1157 1193 86 11 6 chrX 74986141 74986317 -91663979 - L1_Mus3 LINE L1 -14 6624 6448 9 1157 325 350 0 0 chrX 74986594 74986674 -91663622 - ID4 SINE ID -3 80 1 9 1157 650 250 124 6 chrX 74986842 74987019 -91663277 - B3 SINE B2 -12 204 7 9 1157 23 54 0 0 chrX 74987020 74987057 -91663239 + AT_rich Low_complexity Low_complexity 1 37 0 9 1157 6361 102 43 10 chrX 74987723 74988612 -91661684 + Lx4A LINE L1 6140 7057 -1 9 1157 6787 93 18 4 chrX 74988627 74989599 -91660697 + L1_Mur2 LINE L1 3025 4009 -1868 9 1157 1901 48 4 4 chrX 74990720 74990949 -91659347 - L1Md_A LINE L1 -3 6579 6351 9 1157 1972 167 38 14 chrX 74991152 74991517 -91658779 + ORR1B1 LTR MaLR 13 386 -8 9 1157 882 185 7 0 chrX 74992877 74993023 -91657273 - B1_Mus1 SINE Alu -1 147 1 9 1157 459 0 0 0 chrX 74993469 74993520 -91656776 + (CA)n Simple_repeat Simple_repeat 1 51 0 9 1157 251 200 0 0 chrX 74993538 74993593 -91656703 + GA-rich Low_complexity Low_complexity 2 56 0 9 1157 369 0 0 0 chrX 74994011 74994052 -91656244 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 9 1157 866 164 0 58 chrX 74994083 74994238 -91656058 - B1_Mur4 SINE Alu 0 150 5 9 1157 200 149 0 78 chrX 74994481 74994532 -91655764 + (TTAGGG)n Simple_repeat Simple_repeat 3 49 0 9 1157 546 133 0 0 chrX 74994780 74994870 -91655426 + (TTTC)n Simple_repeat Simple_repeat 2 91 0 9 1157 502 136 25 0 chrX 74994874 74994955 -91655341 - B1_Mur2 SINE Alu -1 148 66 9 1157 9641 72 22 1 chrX 74995028 74996288 -91654008 + L1Md_F2 LINE L1 4299 5585 -298 9 1157 8460 52 7 10 chrX 74996289 74997276 -91653020 + L1Md_F2 LINE L1 5587 6570 -12 9 1157 300 250 74 12 chrX 74997524 74997605 -91652691 + PB1D10 SINE Alu 23 108 -9 9 1157 633 266 135 6 chrX 74997626 74997804 -91652492 + B3 SINE B2 5 205 -11 1 1157 226 278 0 65 chrX 74998517 74998594 -91651702 - ID2 SINE ID 0 83 12 1 1157 1430 82 21 16 chrX 74998670 74998856 -91651440 + B2_Mm2 SINE B2 1 187 -8 1 1157 436 247 0 0 chrX 74998856 74998941 -91651355 + B3 SINE B2 32 116 -100 1 1157 1252 82 11 21 chrX 74999044 74999230 -91651066 + B2_Mm1t SINE B2 10 193 0 1 1157 21 36 0 0 chrX 74999857 74999885 -91650411 + AT_rich Low_complexity Low_complexity 1 28 0 1 1157 530 194 0 19 chrX 74999895 75000000 -91650296 - RMER6B LTR ERVK 0 461 359 1 1157 1058 160 194 109 chrX 75000000 75000196 -91650100 - RMER6B LTR ERVK -103 358 119 1 1157 1208 33 0 0 chrX 75000196 75000346 -91649950 + L1Md_A LINE L1 6433 6582 0 2 1157 1058 160 194 109 chrX 75000346 75000479 -91649817 - RMER6B LTR ERVK -343 118 1 1 1157 654 140 0 0 chrX 75000661 75000775 -91649521 + (TA)n Simple_repeat Simple_repeat 1 114 0 3 1157 2066 159 31 33 chrX 75001570 75001784 -91648512 + L1_Mur2 LINE L1 896 1119 -5967 4 1157 1078 70 27 20 chrX 75001784 75001930 -91648366 + B1_Mus1 SINE Alu 1 147 -1 5 1157 2886 159 39 12 chrX 75001930 75002581 -91647715 + L1_Mur2 LINE L1 1120 1784 -4093 4 1157 6067 155 72 16 chrX 75003595 75003740 -91646556 + L1_Mur2 LINE L1 1858 2004 -3873 4 1157 242 56 0 27 chrX 75003740 75003777 -91646519 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 6 1157 6067 155 72 16 chrX 75003777 75004521 -91645775 + L1_Mur2 LINE L1 2005 2783 -3094 4 1157 423 38 0 0 chrX 75004521 75004574 -91645722 + (CAA)n Simple_repeat Simple_repeat 1 53 0 7 1157 6067 155 72 16 chrX 75004574 75004899 -91645397 + L1_Mur2 LINE L1 2784 3139 -2738 4 1157 7973 84 8 2 chrX 75004894 75005941 -91644355 + Lx LINE L1 5602 6654 0 8 1157 1419 78 16 10 chrX 75007365 75007558 -91642738 - B2_Mm2 SINE B2 0 195 2 9 1157 335 289 56 32 chrX 75007790 75007915 -91642381 + B3A SINE B2 45 172 -26 1 1157 243 103 0 0 chrX 75009171 75009210 -91641086 + (GTGTG)n Simple_repeat Simple_repeat 4 42 0 1 1157 583 229 49 21 chrX 75010111 75010254 -91640042 + B1_Mur2 SINE Alu 2 148 -1 1 1157 424 240 8 40 chrX 75010277 75010403 -91639893 + ID_B1 SINE B4 82 203 -21 1 1157 439 240 0 0 chrX 75010419 75010515 -91639781 + B3 SINE B2 28 123 -93 1 1157 240 316 82 89 chrX 75010914 75011060 -91639236 - ID_B1 SINE B4 -66 158 14 1 1157 23 33 0 0 chrX 75011977 75012007 -91638289 + AT_rich Low_complexity Low_complexity 1 30 0 1 1157 15448 132 24 8 chrX 75012109 75015812 -91634484 + Lx2B LINE L1 3243 6999 -1 1 1157 21 36 0 0 chrX 75015961 75015989 -91634307 + AT_rich Low_complexity Low_complexity 1 28 0 1 1157 435 200 92 83 chrX 75016134 75016243 -91634053 + PB1D9 SINE Alu 1 110 -10 1 1157 203 147 0 0 chrX 75016280 75016314 -91633982 + (TGGA)n Simple_repeat Simple_repeat 3 36 0 2 1157 225 226 0 0 chrX 75017114 75017167 -91633129 + (TATATG)n Simple_repeat Simple_repeat 4 56 0 2 1157 264 201 70 13 chrX 75017210 75017366 -91632930 + (TA)n Simple_repeat Simple_repeat 2 166 0 2 1157 198 103 0 0 chrX 75017645 75017674 -91632622 + (TGGA)n Simple_repeat Simple_repeat 1 29 0 2 1157 220 324 15 0 chrX 75017682 75017750 -91632546 + (TAGG)n Simple_repeat Simple_repeat 1 69 0 2 1157 279 217 75 21 chrX 75018836 75018930 -91631366 + MTD LTR MaLR 1 99 -320 2 1157 966 118 15 0 chrX 75019031 75019166 -91631130 + B1_Mur4 SINE Alu 1 137 -13 2 1157 2204 60 0 89 chrX 75019577 75019800 -91630496 - ORR1A0 LTR MaLR -27 319 127 2 1157 1211 58 11 23 chrX 75019800 75019976 -91630320 - L1Md_F2 LINE L1 -1 6581 6408 2 1157 2204 60 0 89 chrX 75019976 75020100 -91630196 - ORR1A0 LTR MaLR -220 126 3 2 1157 283 215 0 112 chrX 75020150 75020239 -91630057 + ID SINE ID 1 79 -145 2 1157 723 163 14 29 chrX 75020273 75020412 -91629884 - B1_Mur3 SINE Alu 0 149 13 3 1157 236 299 30 0 chrX 75020769 75020836 -91629460 - ID4 SINE ID -6 77 9 3 1157 657 197 85 28 chrX 75020952 75021093 -91629203 - B1_Mur3 SINE Alu 0 149 1 3 1157 312 286 60 16 chrX 75021266 75021451 -91628845 + L1MB5 LINE L1 5767 5959 -215 3 1157 427 241 54 0 chrX 75021560 75021672 -91628624 + RSINE1 SINE B4 11 128 -37 3 1157 811 216 27 76 chrX 75021715 75021940 -91628356 + B3 SINE B2 2 215 -1 3 1157 611 263 53 11 chrX 75022409 75022597 -91627699 + ID_B1 SINE B4 12 207 -17 3 1157 285 29 0 0 chrX 75022908 75022942 -91627354 + (T)n Simple_repeat Simple_repeat 1 34 0 3 1157 710 223 140 11 chrX 75023228 75023414 -91626882 + B3 SINE B2 1 210 -6 3 1157 226 255 0 0 chrX 75023444 75023491 -91626805 + L1_Rod LINE L1 5537 5583 -264 3 1157 208 146 33 22 chrX 75023504 75023595 -91626701 + (TA)n Simple_repeat Simple_repeat 2 93 0 4 1157 533 231 15 30 chrX 75023735 75023869 -91626427 + ORR1E LTR MaLR 22 153 -206 4 1157 1623 127 68 10 chrX 75023879 75024173 -91626123 + ORR1A2 LTR MaLR 1 311 -16 4 1157 3853 137 65 44 chrX 75024180 75024923 -91625373 + ORR1A2-int LTR MaLR 1 758 -1205 4 1157 1264 129 77 0 chrX 75024777 75024986 -91625310 + MT2B LTR ERVL 35 259 -342 4 1157 261 208 24 72 chrX 75024931 75025014 -91625282 + RLTR25B LTR ERVK 448 526 -502 4 1157 6887 115 35 14 chrX 75025176 75025872 -91624424 + ORR1A2-int LTR MaLR 762 1488 -475 4 1157 2587 106 164 9 chrX 75025872 75026292 -91624004 + RLTR44D LTR ERVK 2 486 0 4 1157 6887 115 35 14 chrX 75026292 75026772 -91623524 + ORR1A2-int LTR MaLR 1489 1963 0 4 1157 1980 112 72 3 chrX 75026772 75027078 -91623218 + ORR1A2 LTR MaLR 1 327 0 4 1157 237 275 59 59 chrX 75027078 75027163 -91623133 + ORR1E LTR MaLR 154 238 -121 4 1157 336 303 37 64 chrX 75027891 75028078 -91622218 + MTD LTR MaLR 1 182 -237 4 1157 348 271 377 36 chrX 75028087 75028371 -91621925 + MTD LTR MaLR 18 398 -21 4 1157 189 0 0 0 chrX 75028593 75028614 -91621682 + (TATG)n Simple_repeat Simple_repeat 4 24 0 4 1157 686 138 38 17 chrX 75028620 75028861 -91621435 + (TCTA)n Simple_repeat Simple_repeat 1 246 0 4 1157 310 324 80 13 chrX 75029192 75029342 -91620954 - MTD LTR MaLR -259 160 1 5 1157 535 269 28 11 chrX 75029899 75030076 -91620220 + MLT1B LTR MaLR 25 204 -186 5 1157 417 198 122 9 chrX 75030216 75030323 -91619973 - B3A SINE B2 -78 120 2 5 1157 479 289 52 21 chrX 75030869 75031060 -91619236 + B3A SINE B2 2 198 0 5 1157 299 324 0 32 chrX 75032064 75032261 -91618035 + CT-rich Low_complexity Low_complexity 1 190 0 5 1157 5162 93 44 19 chrX 75032551 75033308 -91616988 + Lx LINE L1 5878 6653 -1 5 1157 451 211 117 22 chrX 75033821 75034029 -91616267 + MTEa LTR MaLR 96 371 -8 5 1157 247 316 0 0 chrX 75035420 75035496 -91614800 + ID4_ SINE ID 2 77 -6 5 1157 267 31 0 0 chrX 75035601 75035633 -91614663 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 1157 226 231 77 0 chrX 75035843 75035908 -91614388 + ID4_ SINE ID 13 82 -1 5 1157 438 268 10 0 chrX 75036314 75036439 -91613857 + B1F SINE Alu 7 133 -16 6 1157 742 122 0 33 chrX 75036788 75036941 -91613355 + GA-rich Low_complexity Low_complexity 4 151 0 6 1157 267 79 0 0 chrX 75038807 75038845 -91611451 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1157 315 0 0 0 chrX 75038845 75038879 -91611417 + (GA)n Simple_repeat Simple_repeat 1 35 0 6 1157 352 159 58 0 chrX 75038931 75039000 -91611296 + B1_Mur3 SINE Alu 68 140 -9 6 1157 362 339 46 0 chrX 75039259 75039389 -91610907 + RSINE1 SINE B4 3 138 -27 6 1157 436 234 26 51 chrX 75039441 75039550 -91610746 + PB1D9 SINE Alu 1 107 -13 6 1157 276 30 0 0 chrX 75039550 75039583 -91610713 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 6 1157 183 156 0 0 chrX 75039600 75039632 -91610664 + GA-rich Low_complexity Low_complexity 2 33 0 6 1157 345 299 0 103 chrX 75039739 75039836 -91610460 + B1F SINE Alu 22 108 -9 6 1157 412 203 52 52 chrX 75039855 75039990 -91610306 + ID_B1 SINE B4 64 198 -26 7 1157 270 0 0 0 chrX 75041528 75041558 -91608738 + (TC)n Simple_repeat Simple_repeat 1 30 0 7 1157 459 0 0 0 chrX 75041558 75041608 -91608688 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 1157 26 0 0 0 chrX 75042219 75042245 -91608051 + AT_rich Low_complexity Low_complexity 1 26 0 7 1157 2050 162 41 5 chrX 75042381 75042748 -91607548 + RLTR14 LTR ERV1 3 382 0 7 1157 312 253 21 42 chrX 75044235 75044330 -91605966 + RSINE1 SINE B4 13 105 -60 7 1157 217 296 0 0 chrX 75044308 75044362 -91605934 - ID SINE ID -155 69 16 7 1157 2428 108 91 5 chrX 75044363 75044736 -91605560 + MTB_Mm LTR MaLR 3 407 0 7 1157 414 57 0 0 chrX 75045083 75045136 -91605160 + (TG)n Simple_repeat Simple_repeat 1 53 0 7 1157 391 283 26 9 chrX 75045276 75045390 -91604906 - B3A SINE B2 -82 116 1 7 1157 222 37 0 0 chrX 75045407 75045434 -91604862 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 8 1157 493 211 0 46 chrX 75045882 75045991 -91604305 + PB1D9 SINE Alu 17 120 0 8 1157 605 170 45 0 chrX 75046142 75046254 -91604042 + B1_Mur4 SINE Alu 34 150 0 8 1157 189 0 0 0 chrX 75046257 75046278 -91604018 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 8 1157 368 20 20 0 chrX 75046496 75046545 -91603751 + (CA)n Simple_repeat Simple_repeat 2 51 0 8 1157 210 325 0 48 chrX 75046640 75046724 -91603572 + RSINE1 SINE B4 43 122 -43 8 1157 269 299 0 0 chrX 75046784 75046851 -91603445 - RSINE1 SINE B4 -97 68 2 8 1157 23 33 0 0 chrX 75047358 75047388 -91602908 + AT_rich Low_complexity Low_complexity 1 30 0 8 1157 696 152 68 68 chrX 75047388 75047536 -91602760 + B1_Mus1 SINE Alu 1 148 0 8 1157 799 213 2 4 chrX 75048330 75048428 -91601868 + (TCCA)n Simple_repeat Simple_repeat 1 97 0 8 1157 4534 12 0 0 chrX 75048428 75048921 -91601375 - MT2_Mm LTR ERVL 0 493 1 9 1157 799 175 6 11 chrX 75048921 75049067 -91601229 + (TCCA)n Simple_repeat Simple_repeat 1 147 0 9 1157 198 118 0 0 chrX 75049098 75049132 -91601164 + (TCCA)n Simple_repeat Simple_repeat 4 37 0 9 1157 294 222 26 19 chrX 75049203 75049232 -91601064 + (TCCA)n Simple_repeat Simple_repeat 1 31 0 9 1157 357 24 0 0 chrX 75049232 75049274 -91601022 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 1157 698 213 14 8 chrX 75049274 75049585 -91600711 + (TCCA)n Simple_repeat Simple_repeat 1 312 0 9 1157 340 261 12 0 chrX 75049637 75049739 -91600557 + (TCCA)n Simple_repeat Simple_repeat 3 106 0 9 1157 3827 127 120 39 chrX 75049739 75050438 -91599858 + RMER6A LTR ERVK 1 756 0 9 1157 340 261 12 0 chrX 75050438 75050500 -91599796 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 9 1157 296 323 25 6 chrX 75050541 75050703 -91599593 + (TCCA)n Simple_repeat Simple_repeat 1 165 0 9 1157 456 19 0 0 chrX 75050732 75050785 -91599511 + (TG)n Simple_repeat Simple_repeat 1 53 0 9 1157 378 0 0 0 chrX 75050950 75050992 -91599304 + (TG)n Simple_repeat Simple_repeat 1 42 0 9 1157 186 43 0 0 chrX 75051061 75051084 -91599212 + (TG)n Simple_repeat Simple_repeat 2 24 0 9 1157 198 0 0 0 chrX 75051384 75051406 -91598890 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 1157 351 0 0 0 chrX 75051539 75051578 -91598718 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1157 414 0 0 0 chrX 75051578 75051623 -91598673 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 1157 2242 51 7 0 chrX 75051690 75051986 -91598310 + MTA_Mm LTR MaLR 98 395 -1 1 1157 5556 63 33 0 chrX 75051986 75052687 -91597609 + L1_Mus1 LINE L1 5843 6566 -1 1 1157 186 103 0 0 chrX 75052839 75052868 -91597428 + (TATG)n Simple_repeat Simple_repeat 4 32 0 1 1157 359 224 26 0 chrX 75053428 75053504 -91596792 - B1F2 SINE Alu -42 107 30 1 1157 414 252 8 16 chrX 75053593 75053714 -91596582 - MTEb LTR MaLR -1 378 259 1 1157 553 292 114 53 chrX 75053724 75054118 -91596178 - RMER5 LTR ERV1 -102 432 15 1 1157 817 136 0 119 chrX 75054770 75054888 -91595408 - B1_Mus1 SINE Alu -6 142 38 1 1157 1478 69 11 5 chrX 75054888 75055077 -91595219 - B2_Mm2 SINE B2 -4 191 2 1 1157 817 136 0 119 chrX 75055077 75055117 -91595179 - B1_Mus1 SINE Alu -111 37 3 1 1157 22 0 0 0 chrX 75055126 75055148 -91595148 + AT_rich Low_complexity Low_complexity 1 22 0 1 1157 308 310 103 97 chrX 75055446 75055775 -91594521 - RMER10A LTR ERVL -94 348 18 1 1157 392 296 37 121 chrX 75056228 75056443 -91593853 + RLTR42 LTR ERVK 1 197 -42 1 1157 25 0 0 0 chrX 75056592 75056617 -91593679 + AT_rich Low_complexity Low_complexity 1 25 0 1 1157 23 54 0 0 chrX 75056758 75056795 -91593501 + AT_rich Low_complexity Low_complexity 1 37 0 1 1157 198 0 0 0 chrX 75057003 75057025 -91593271 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1 1157 684 220 14 0 chrX 75057294 75057435 -91592861 + B1_Mur4 SINE Alu 2 144 -6 1 1157 265 24 0 45 chrX 75057437 75057481 -91592815 + (CCAA)n Simple_repeat Simple_repeat 3 44 0 1 1157 25 0 0 0 chrX 75057902 75057927 -91592369 + AT_rich Low_complexity Low_complexity 1 25 0 1 1157 853 168 0 14 chrX 75057940 75058079 -91592217 + B1_Mur1 SINE Alu 12 148 -1 1 1157 351 0 0 0 chrX 75058127 75058166 -91592130 + (CAA)n Simple_repeat Simple_repeat 3 41 0 1 1157 411 21 0 0 chrX 75058784 75058832 -91591464 + (TGG)n Simple_repeat Simple_repeat 3 50 0 1 1157 252 0 0 0 chrX 75058832 75058860 -91591436 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1157 210 111 44 0 chrX 75059572 75059617 -91590679 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 1157 1190 126 90 51 chrX 75059622 75059856 -91590440 - Lx4B LINE L1 -205 6853 6611 1 1157 1125 123 103 0 chrX 75059856 75060051 -91590245 + Lx4B LINE L1 6844 7058 0 1 1157 560 273 85 169 chrX 75060178 75060544 -91589752 - ORR1D2 LTR MaLR -12 358 24 1 1157 21 0 0 0 chrX 75060664 75060685 -91589611 + AT_rich Low_complexity Low_complexity 1 21 0 1 1157 3252 48 0 8 chrX 75061480 75061879 -91588417 - MTA_Mm LTR MaLR 0 396 1 1 1157 283 241 71 118 chrX 75062108 75062235 -91588061 + ID_B1 SINE B4 87 207 -17 1 1157 342 0 0 0 chrX 75062257 75062295 -91588001 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1157 510 17 0 0 chrX 75062297 75062356 -91587940 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 1157 420 37 0 0 chrX 75062636 75062690 -91587606 + (TTTC)n Simple_repeat Simple_repeat 1 54 0 1 1157 1140 124 0 0 chrX 75062692 75062870 -91587426 + (TC)n Simple_repeat Simple_repeat 1 178 0 1 1157 369 0 0 0 chrX 75062872 75062913 -91587383 + (TTCC)n Simple_repeat Simple_repeat 4 44 0 1 1157 628 129 103 23 chrX 75063251 75063425 -91586871 - Lx9 LINE L1 0 7644 7457 1 1157 1104 187 118 89 chrX 75063494 75063876 -91586420 - RMER10A LTR ERVL 0 442 50 1 1157 207 295 35 18 chrX 75064381 75064495 -91585801 + G-rich Low_complexity Low_complexity 3 118 0 1 1157 209 203 33 17 chrX 75064438 75064498 -91585798 + (TAGGG)n Simple_repeat Simple_repeat 2 62 0 1 1157 5736 48 25 0 chrX 75064752 75065466 -91584830 + L1Md_F2 LINE L1 5850 6581 -1 1 1157 263 49 0 0 chrX 75065498 75065539 -91584757 + L1Md_T LINE L1 6542 6582 0 1 1157 550 326 0 0 chrX 75066212 75066353 -91583943 - MTEa LTR MaLR -233 146 6 1 1157 371 249 81 10 chrX 75066504 75066625 -91583671 - MTEb LTR MaLR -12 367 217 1 1157 1028 284 111 11 chrX 75066655 75067015 -91583281 + MTD LTR MaLR 19 414 -5 1 1157 1751 210 29 3 chrX 75067120 75067469 -91582827 - MTC LTR MaLR -63 358 1 1 1157 373 331 104 68 chrX 75067475 75068109 -91582187 + L1M4 LINE L1 2809 3472 -2674 1 1157 1022 127 11 44 chrX 75068109 75068290 -91582006 + B2_Mm2 SINE B2 3 177 -18 1 1157 373 331 104 68 chrX 75068290 75068364 -91581932 + L1M4 LINE L1 3473 3542 -2604 1 1157 30 0 0 0 chrX 75068388 75068418 -91581878 + AT_rich Low_complexity Low_complexity 1 30 0 1 1157 490 342 72 0 chrX 75068419 75068571 -91581725 - RSINE1 SINE B4 -2 163 1 1 1157 39 22 0 0 chrX 75068675 75068721 -91581575 + AT_rich Low_complexity Low_complexity 1 46 0 1 1157 21 0 0 0 chrX 75069619 75069640 -91580656 + AT_rich Low_complexity Low_complexity 1 21 0 1 1157 1841 106 52 15 chrX 75069966 75070293 -91580003 - L1_Mus3 LINE L1 -395 5488 5150 1 1157 7093 89 20 1 chrX 75070294 75071394 -91578902 + L1_Mus3 LINE L1 5512 6632 -6 1 1157 367 178 22 22 chrX 75071456 75071548 -91578748 - Lx7 LINE L1 0 7696 7605 1 1157 667 156 148 0 chrX 75071991 75072119 -91578177 + B1_Mus1 SINE Alu 2 148 0 1 1157 10674 90 22 16 chrX 75072380 75074517 -91575779 + L1VL4 LINE L1 401 2551 -1008 1 1157 6376 133 74 12 chrX 75074559 75076324 -91573972 + Lx2 LINE L1 5116 6996 -1 1 1157 268 284 13 13 chrX 75076431 75076581 -91573715 + (TA)n Simple_repeat Simple_repeat 2 151 0 1 1157 205 281 37 0 chrX 75076559 75076641 -91573655 + (TCTA)n Simple_repeat Simple_repeat 1 85 0 1 1157 306 190 62 23 chrX 75076692 75076821 -91573475 + (TCTA)n Simple_repeat Simple_repeat 4 137 0 1 1157 188 211 14 0 chrX 75076835 75076906 -91573390 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 1 1157 753 128 0 0 chrX 75076930 75077055 -91573241 + (TCTA)n Simple_repeat Simple_repeat 4 128 0 1 1157 353 99 37 12 chrX 75077321 75077403 -91572893 + (TAGA)n Simple_repeat Simple_repeat 2 85 0 1 1157 239 337 21 82 chrX 75077576 75077673 -91572623 + MTE2b LTR MaLR 252 342 -37 1 1157 515 200 147 31 chrX 75078248 75078377 -91571919 - B1_Mus1 SINE Alu 0 148 5 1 1157 378 222 65 0 chrX 75078396 75078549 -91571747 + (TAGA)n Simple_repeat Simple_repeat 4 166 0 1 1157 1032 219 0 32 chrX 75078554 75078635 -91571661 + MTC LTR MaLR 1 81 -340 1 1157 1043 55 62 7 chrX 75078635 75078781 -91571515 + L1_Mus2 LINE L1 6413 6566 0 1 1157 1032 219 0 32 chrX 75078781 75078916 -91571380 + MTC LTR MaLR 82 210 -211 1 1157 4368 154 11 0 chrX 75078916 75079900 -91570396 - Lx2A LINE L1 -1001 6007 5009 1 1157 6118 116 26 45 chrX 75079901 75080895 -91569401 + Lx2A LINE L1 6034 7008 0 1 1157 1186 202 23 14 chrX 75080898 75081119 -91569177 + MTC LTR MaLR 199 421 0 1 1157 610 247 52 23 chrX 75081119 75081292 -91569004 + RMER20A LTR ERVK 339 516 0 1 1157 1368 182 90 12 chrX 75081292 75081552 -91568744 - ORR1C1 LTR MaLR -123 255 7 1 1157 477 0 0 0 chrX 75081553 75081606 -91568690 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1157 334 301 18 0 chrX 75081685 75081798 -91568498 - Lx8 LINE L1 -610 6863 6749 1 1157 216 316 13 0 chrX 75081877 75081953 -91568343 + (TATG)n Simple_repeat Simple_repeat 4 80 0 1 1157 832 218 111 60 chrX 75082018 75082352 -91567944 - MTD LTR MaLR -8 413 1 1 1157 1425 92 5 0 chrX 75082361 75082557 -91567739 - L1_Mus2 LINE L1 0 6566 6370 1 1157 441 0 0 0 chrX 75082675 75082724 -91567572 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 1157 690 224 218 0 chrX 75082842 75083012 -91567284 - B3 SINE B2 -9 207 1 1 1157 521 242 30 38 chrX 75083014 75083147 -91567149 - B4 SINE B4 -67 225 94 1 1157 633 289 65 34 chrX 75083999 75084354 -91565942 + Lx8 LINE L1 4859 5250 -630 1 1157 843 316 15 15 chrX 75084371 75084442 -91565854 + Lx8 LINE L1 5504 5574 -273 1 1157 2362 64 19 0 chrX 75084442 75084755 -91565541 - L1Md_A LINE L1 0 6582 6264 1 1157 843 300 35 25 chrX 75084755 75085108 -91565188 + Lx8 LINE L1 5575 5965 -1679 1 1157 1586 296 147 61 chrX 75085408 75086150 -91564146 + Lx8 LINE L1 6081 6851 -622 1 1157 653 220 50 0 chrX 75086150 75086291 -91564005 - B1_Mur2 SINE Alu -1 148 1 1 1157 1586 296 147 61 chrX 75086291 75086614 -91563682 + Lx8 LINE L1 6852 7238 -235 1 1157 234 91 0 0 chrX 75086625 75086658 -91563638 + (CCTG)n Simple_repeat Simple_repeat 2 34 0 1 1157 192 77 0 0 chrX 75086661 75086687 -91563609 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 1 1157 764 186 7 7 chrX 75086709 75086855 -91563441 - B1_Mus2 SINE Alu 0 147 2 1 1157 34 0 0 0 chrX 75086961 75086995 -91563301 + AT_rich Low_complexity Low_complexity 1 34 0 1 1157 57 28 0 0 chrX 75087093 75087164 -91563132 + AT_rich Low_complexity Low_complexity 1 71 0 1 1157 439 227 62 0 chrX 75087683 75087780 -91562516 - B4A SINE B4 -189 103 1 1 1157 26 30 0 0 chrX 75087783 75087816 -91562480 + AT_rich Low_complexity Low_complexity 1 33 0 1 1157 360 0 0 0 chrX 75088777 75088817 -91561479 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 1157 258 32 0 0 chrX 75088926 75088957 -91561339 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 1157 317 311 159 26 chrX 75089062 75089343 -91560953 + RMER15 LTR ERVL 14 421 -154 1 1157 448 154 14 0 chrX 75089453 75089531 -91560765 - B1_Mur1 SINE Alu -8 141 68 1 1157 248 257 93 76 chrX 75090614 75090732 -91559564 - B1_Mur4 SINE Alu -2 148 29 1 1157 431 299 135 22 chrX 75090653 75090831 -91559465 - ID_B1 SINE B4 -26 198 1 1 1157 210 152 0 0 chrX 75091274 75091307 -91558989 + B3A SINE B2 2 34 -164 1 1157 538 124 10 10 chrX 75091422 75091520 -91558776 - L1_Rod LINE L1 -1173 4674 4577 1 1157 586 214 146 40 chrX 75091521 75091651 -91558645 + Lx9 LINE L1 7357 7515 -129 1 1157 315 0 0 0 chrX 75091651 75091686 -91558610 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1157 586 214 146 40 chrX 75091686 75091808 -91558488 + Lx9 LINE L1 7516 7635 -9 1 1157 29 28 0 0 chrX 75091968 75092004 -91558292 + AT_rich Low_complexity Low_complexity 1 36 0 1 1157 542 261 0 60 chrX 75092004 75092020 -91558276 + ID_B1 SINE B4 77 218 -6 1 1157 838 185 0 0 chrX 75092020 75092155 -91558141 + B1_Mur2 SINE Alu 9 143 -6 1 1157 734 155 124 0 chrX 75092165 75092294 -91558002 + B1_Mus1 SINE Alu 1 145 -3 1 1157 40 49 0 0 chrX 75092301 75092362 -91557934 + AT_rich Low_complexity Low_complexity 1 61 0 1 1157 270 290 17 17 chrX 75092724 75092782 -91557514 + (TA)n Simple_repeat Simple_repeat 1 57 0 2 1157 674 176 39 3 chrX 75092782 75092908 -91557388 + (TCTA)n Simple_repeat Simple_repeat 1 212 -86 2 1157 270 290 17 17 chrX 75092908 75093021 -91557275 + (TA)n Simple_repeat Simple_repeat 1 114 0 2 1157 674 176 39 3 chrX 75093021 75093070 -91557226 + (TCTA)n Simple_repeat Simple_repeat 213 298 0 2 1157 8841 61 2 0 chrX 75094377 75095559 -91554737 + L1Md_F2 LINE L1 4402 5585 -298 2 1157 8117 43 5 0 chrX 75095560 75096549 -91553747 + L1Md_F2 LINE L1 5587 6580 -2 2 1157 3277 29 5 5 chrX 75096549 75096964 -91553332 + L1Md_F2 LINE L1 5172 5586 -297 2 1157 8125 45 2 2 chrX 75096964 75097960 -91552336 + L1Md_F2 LINE L1 5587 6582 0 2 1157 28 61 0 0 chrX 75099607 75099656 -91550640 + AT_rich Low_complexity Low_complexity 1 49 0 2 1157 338 320 69 20 chrX 75100128 75100230 -91550066 - RSINE1 SINE B4 -10 155 49 2 1157 501 323 138 17 chrX 75100415 75100654 -91549642 - ORR1D2 LTR MaLR -43 327 60 2 1157 690 232 0 7 chrX 75101519 75101662 -91548634 + B1_Mur2 SINE Alu 4 145 -4 2 1157 6448 68 5 0 chrX 75101973 75102838 -91547458 - L1_Mus1 LINE L1 -1 6566 5698 2 1157 308 192 14 14 chrX 75102964 75103038 -91547258 - Lx8 LINE L1 -9 7464 7391 2 1157 28 0 0 0 chrX 75103064 75103092 -91547204 + AT_rich Low_complexity Low_complexity 1 28 0 2 1157 306 0 0 0 chrX 75103530 75103564 -91546732 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1157 2220 174 43 2 chrX 75103814 75104211 -91546085 + MTC LTR MaLR 1 413 -8 2 1158 345 363 0 26 chrX 75104258 75104453 -91545843 + L1M2 LINE L1 3478 3667 -2476 2 1158 282 235 15 0 chrX 75104997 75105065 -91545231 + L1M2 LINE L1 4029 4097 -2046 2 1158 5260 190 13 6 chrX 75105463 75106558 -91543738 + L1_Mm LINE L1 4583 5685 -198 2 1158 446 105 0 4 chrX 75106557 75106642 -91543654 - L1_Mus2 LINE L1 -2 6580 6495 2 1158 6663 155 16 65 chrX 75106643 75108037 -91542259 + Lx2 LINE L1 5671 6997 0 2 1158 325 281 24 12 chrX 75108267 75108436 -91541860 + (TA)n Simple_repeat Simple_repeat 1 171 0 2 1158 339 113 0 0 chrX 75108451 75108504 -91541792 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1158 23 33 0 0 chrX 75109549 75109579 -91540717 + AT_rich Low_complexity Low_complexity 1 30 0 2 1158 229 204 0 0 chrX 75111407 75111451 -91538845 + GA-rich Low_complexity Low_complexity 1 44 0 2 1158 297 89 0 0 chrX 75111723 75111768 -91538528 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1158 435 198 190 0 chrX 75111788 75111909 -91538387 - B1_Mur3 SINE Alu -5 144 1 2 1158 1037 113 0 0 chrX 75111994 75112135 -91538161 - B1_Mm SINE Alu -6 141 1 2 1158 24 32 0 0 chrX 75112149 75112180 -91538116 + AT_rich Low_complexity Low_complexity 1 31 0 2 1158 568 179 9 19 chrX 75112483 75112591 -91537705 - MTC LTR MaLR -9 412 306 2 1158 2871 194 18 8 chrX 75112592 75113189 -91537107 - L1_Mur2 LINE L1 -531 5346 4744 2 1158 996 239 26 7 chrX 75113189 75113517 -91536779 - MTC LTR MaLR -127 294 26 2 1158 405 0 0 0 chrX 75113522 75113567 -91536729 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 1158 268 270 0 0 chrX 75113937 75114000 -91536296 + (TAA)n Simple_repeat Simple_repeat 2 64 0 2 1158 1804 178 7 95 chrX 75115408 75115831 -91534465 - ORR1B1 LTR MaLR 0 394 9 2 1158 565 321 35 30 chrX 75115846 75116045 -91534251 + B3 SINE B2 12 211 -5 2 1158 436 306 0 20 chrX 75116066 75116213 -91534083 + B1_Mur2 SINE Alu 5 148 -1 2 1158 2083 125 3 58 chrX 75116445 75116793 -91533503 - ORR1A4 LTR MaLR 0 329 1 2 1158 21 0 0 0 chrX 75116796 75116817 -91533479 + AT_rich Low_complexity Low_complexity 1 21 0 2 1158 1394 274 74 28 chrX 75116817 75117290 -91533006 - Lx6 LINE L1 -21 7439 6945 2 1158 393 232 0 0 chrX 75117534 75117629 -91532667 + (TA)n Simple_repeat Simple_repeat 2 96 0 2 1158 924 24 24 0 chrX 75118922 75119045 -91531251 + (TCTA)n Simple_repeat Simple_repeat 1 126 0 2 1158 1922 237 89 2 chrX 75119045 75119472 -91530824 - Lx5 LINE L1 -16 7034 6571 2 1158 1783 141 26 3 chrX 75119522 75119829 -91530467 - L1_Mur2 LINE L1 -1426 4451 4138 2 1158 2227 211 36 5 chrX 75119839 75120254 -91530042 - Lx5 LINE L1 -3 7047 6620 2 1158 1551 226 22 6 chrX 75120254 75120566 -91529730 + RMER20A LTR ERVK 194 510 -6 2 1158 7208 136 15 10 chrX 75120569 75121814 -91528482 - L1_Mur2 LINE L1 -1356 4521 3271 2 1158 281 276 139 16 chrX 75121825 75121954 -91528342 + Lx8 LINE L1 7061 7205 -268 2 1158 304 321 28 28 chrX 75122542 75122651 -91527645 + RMER15 LTR ERVL 361 469 -106 2 1158 191 167 0 23 chrX 75122742 75122785 -91527511 + (CATA)n Simple_repeat Simple_repeat 3 44 0 2 1158 288 0 0 0 chrX 75122785 75122817 -91527479 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1158 1254 254 215 48 chrX 75122947 75123430 -91526866 + RLTR33 LTR ERVK 88 651 -27 2 1158 5877 16 0 0 chrX 75123833 75124508 -91525788 + L1Md_T LINE L1 4911 5585 -298 2 1158 8462 32 0 0 chrX 75124509 75125505 -91524791 + L1Md_T LINE L1 5587 6582 0 2 1158 264 136 0 0 chrX 75125648 75125692 -91524604 - U2 snRNA snRNA -144 44 1 2 1158 1045 213 5 0 chrX 75126940 75127128 -91523168 + B3 SINE B2 1 189 -27 2 1158 516 340 13 66 chrX 75127773 75128000 -91522296 - B3 SINE B2 0 216 2 2 1158 557 14 14 0 chrX 75128654 75128724 -91521572 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 2 1158 1250 69 0 6 chrX 75128775 75128950 -91521346 + (TTCC)n Simple_repeat Simple_repeat 2 175 0 2 1158 659 176 57 29 chrX 75128950 75129079 -91521217 - B1_Mur3 SINE Alu -11 138 5 2 1158 21288 25 0 0 chrX 75129772 75132946 -91517350 - L1Md_T LINE L1 0 6582 3403 2 1158 318 306 24 0 chrX 75133285 75133370 -91516926 - Lx8 LINE L1 -212 7261 7175 2 1158 671 229 81 90 chrX 75133546 75133868 -91516428 - Lx7 LINE L1 0 7696 7378 2 1158 22 80 0 0 chrX 75133868 75133918 -91516378 + AT_rich Low_complexity Low_complexity 1 50 0 2 1158 33 85 0 0 chrX 75134284 75134366 -91515930 + AT_rich Low_complexity Low_complexity 1 82 0 2 1158 1647 21 0 0 chrX 75134799 75134986 -91515310 + B2_Mm1a SINE B2 2 188 -5 2 1158 1166 81 0 0 chrX 75134996 75135144 -91515152 + B1_Mus1 SINE Alu 1 148 0 2 1158 237 263 65 13 chrX 75135826 75135903 -91514393 - RLTR22_Mur LTR ERVK -476 1372 1292 2 1158 24 0 0 0 chrX 75135915 75135939 -91514357 + AT_rich Low_complexity Low_complexity 1 24 0 2 1158 21 36 0 0 chrX 75136094 75136122 -91514174 + AT_rich Low_complexity Low_complexity 1 28 0 2 1158 1551 97 0 0 chrX 75136234 75136441 -91513855 - L1_Mm LINE L1 -267 5616 5410 2 1158 13591 108 3 7 chrX 75136455 75138793 -91511503 - L1_Mus2 LINE L1 -2612 3271 1108 2 1158 2576 229 72 27 chrX 75138798 75139751 -91510545 - L1_Mus2 LINE L1 -5775 1209 241 2 1158 880 281 46 36 chrX 75139753 75140141 -91510155 + L1_Rod LINE L1 3904 4295 -1552 2 1158 40028 18 1 9 chrX 75140136 75146355 -91503941 - L1Md_A LINE L1 -1 6581 416 2 1158 375 270 22 40 chrX 75146349 75146540 -91503756 + L1_Rod LINE L1 4271 4471 -1412 2 1158 1541 57 0 5 chrX 75146540 75146734 -91503562 + B2_Mm2 SINE B2 1 193 -2 2 1158 288 294 18 101 chrX 75146734 75146804 -91503492 + L1_Rod LINE L1 4472 4523 -1360 2 1158 7668 66 1 2 chrX 75146825 75148443 -91501853 - L1Md_F2 LINE L1 -3 6579 4964 2 1158 2597 106 14 21 chrX 75148462 75148885 -91501411 - MusHAL1 LINE L1 -1585 1127 708 2 1158 494 227 27 38 chrX 75148888 75149071 -91501225 + RMER17C LTR ERVK 95 275 -135 2 1158 296 91 121 0 chrX 75149107 75149173 -91501123 - MusHAL1 LINE L1 -2440 913 840 2 1158 34652 74 1 8 chrX 75149157 75155220 -91495076 - L1Md_F2 LINE L1 0 6582 563 2 1158 1492 84 0 64 chrX 75155292 75155616 -91494680 - MusHAL1 LINE L1 -2474 879 585 2 1158 3189 45 20 2 chrX 75155624 75156023 -91494273 + L1Md_F2 LINE L1 6177 6582 0 2 1158 3547 99 22 30 chrX 75156428 75156967 -91493329 - L1VL2 LINE L1 -5498 837 303 2 1158 2405 129 71 0 chrX 75156968 75157349 -91492947 - L1VL4 LINE L1 -5688 614 207 2 1158 43 0 0 48 chrX 75157357 75157419 -91492877 + AT_rich Low_complexity Low_complexity 1 59 0 2 1158 789 97 22 0 chrX 75157667 75157801 -91492495 + L1_Mus3 LINE L1 6496 6632 -6 2 1158 185 35 69 0 chrX 75157894 75157923 -91492373 + (GGAGAA)n Simple_repeat Simple_repeat 6 36 0 2 1158 23 0 0 0 chrX 75157923 75157946 -91492350 + AT_rich Low_complexity Low_complexity 1 23 0 2 1158 16638 148 39 5 chrX 75157946 75162082 -91488214 - Lx4A LINE L1 0 7058 2768 2 1158 414 316 0 8 chrX 75162240 75162358 -91487938 - B3 SINE B2 -5 211 95 2 1158 21 0 0 0 chrX 75162599 75162620 -91487676 + AT_rich Low_complexity Low_complexity 1 21 0 2 1158 401 298 43 0 chrX 75163397 75163538 -91486758 - B1_Mur2 SINE Alu 0 149 3 2 1158 723 290 34 20 chrX 75163558 75163762 -91486534 - B3 SINE B2 0 216 10 2 1158 4870 136 29 5 chrX 75163831 75164650 -91485646 + Lx3A LINE L1 6127 6965 -16 2 1158 420 20 0 0 chrX 75164654 75164703 -91485593 + (GA)n Simple_repeat Simple_repeat 2 50 0 2 1158 1747 171 8 75 chrX 75164713 75165086 -91485210 + ORR1B1 LTR MaLR 47 394 0 2 1158 293 250 0 0 chrX 75166493 75166557 -91483739 + (TTA)n Simple_repeat Simple_repeat 2 65 0 2 1158 1031 213 6 181 chrX 75166940 75167278 -91483018 + MTC LTR MaLR 16 294 -127 2 1158 2774 196 45 0 chrX 75167278 75167329 -91482967 + L1_Mur1 LINE L1 4753 4803 -1083 2 1158 324 0 0 0 chrX 75167329 75167365 -91482931 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1158 2774 196 45 0 chrX 75167365 75167890 -91482406 + L1_Mur1 LINE L1 4804 5353 -533 2 1158 528 179 9 19 chrX 75167891 75167999 -91482297 + MTC LTR MaLR 306 412 -9 2 1158 25 31 0 0 chrX 75168297 75168329 -91481967 + AT_rich Low_complexity Low_complexity 1 32 0 2 1158 1077 116 0 0 chrX 75168343 75168490 -91481806 + B1_Mm SINE Alu 1 147 0 2 1158 452 192 192 0 chrX 75168574 75168694 -91481602 + B1_Mur3 SINE Alu 1 143 -6 2 1158 249 128 0 0 chrX 75168714 75168761 -91481535 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1158 229 204 0 0 chrX 75169033 75169077 -91481219 + CT-rich Low_complexity Low_complexity 1 44 0 2 1158 23 33 0 0 chrX 75170901 75170931 -91479365 + AT_rich Low_complexity Low_complexity 1 30 0 2 1158 243 88 0 0 chrX 75171971 75172005 -91478291 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1158 357 266 23 12 chrX 75172030 75172201 -91478095 + (TA)n Simple_repeat Simple_repeat 2 174 0 3 1158 8482 159 9 10 chrX 75172429 75174034 -91476262 - Lx2 LINE L1 0 6997 5446 3 1158 1225 68 0 0 chrX 75174034 75174182 -91476114 - B1_Mus1 SINE Alu 0 148 1 3 1158 6335 189 3 62 chrX 75174182 75175062 -91475234 - Lx2 LINE L1 -438 5445 4583 3 1158 225 0 0 0 chrX 75175153 75175178 -91475118 + (CACCC)n Simple_repeat Simple_repeat 2 26 0 3 1158 283 220 17 0 chrX 75175506 75175565 -91474731 - L1M2 LINE L1 -2055 4088 4029 3 1158 22 56 0 0 chrX 75175680 75175716 -91474580 + AT_rich Low_complexity Low_complexity 1 36 0 3 1158 252 333 0 0 chrX 75176222 75176312 -91473984 - L1M2 LINE L1 -2576 3567 3478 3 1158 536 94 0 23 chrX 75176370 75176457 -91473839 - MTC LTR MaLR -8 413 329 3 1158 2622 146 30 5 chrX 75177268 75177694 -91472602 - RLTR9B LTR ERVK 0 437 1 3 1158 1223 61 0 0 chrX 75178079 75178227 -91472069 + B1_Mus1 SINE Alu 1 148 0 3 1158 228 161 0 0 chrX 75178227 75178289 -91472007 + A-rich Low_complexity Low_complexity 1 62 0 3 1158 7229 101 2 1 chrX 75179327 75180992 -91469304 - L1_Mus1 LINE L1 0 6567 4899 3 1158 1205 112 6 6 chrX 75180990 75181169 -91469127 - L1_Mus2 LINE L1 -115 6451 6273 3 1158 8659 97 5 12 chrX 75181165 75181503 -91468793 - L1_Mus1 LINE L1 -2614 3269 2932 3 1158 3109 61 5 0 chrX 75181503 75181895 -91468401 - MTA_Mm LTR MaLR 0 396 3 3 1158 8659 97 5 12 chrX 75181895 75182834 -91467462 - L1_Mus1 LINE L1 -2952 2931 2001 3 1158 538 278 32 16 chrX 75182856 75183046 -91467250 - RMER4A LTR ERVK -111 355 163 3 1158 38542 32 1 1 chrX 75183217 75190040 -91460256 - L1Md_T LINE L1 0 6585 1 3 1158 3588 161 11 20 chrX 75190117 75190805 -91459491 - L1_Mus3 LINE L1 0 6638 6000 3 1158 219 132 73 0 chrX 75190805 75190829 -91459467 + T-rich Low_complexity Low_complexity 7 33 0 3 1158 34732 80 6 0 chrX 75190836 75197071 -91453225 - L1Md_F2 LINE L1 0 6582 308 3 1158 3063 66 5 0 chrX 75197071 75197463 -91452833 - MTA_Mm LTR MaLR -2 394 1 3 1158 11657 95 13 36 chrX 75197465 75200099 -91450197 - L1VL1 LINE L1 -2952 2931 369 3 1158 1011 224 14 24 chrX 75200132 75200420 -91449876 + L1Md_F2 LINE L1 220 504 -6137 3 1158 693 33 0 0 chrX 75200425 75200516 -91449780 + L1Md_T LINE L1 6492 6582 0 3 1158 225 125 0 0 chrX 75200750 75200782 -91449514 + L1Md_A LINE L1 720 751 -5973 3 1158 2350 162 72 35 chrX 75200757 75201749 -91448547 + L1Md_F2 LINE L1 316 1320 -5321 3 1158 3763 68 2 0 chrX 75201737 75202224 -91448072 + L1Md_F2 LINE L1 2384 2871 -3015 3 1158 7856 46 1 21 chrX 75202221 75203213 -91447083 + L1Md_F2 LINE L1 4618 5589 -297 3 1158 8029 54 2 8 chrX 75203213 75204214 -91446082 + L1Md_F2 LINE L1 5590 6584 -1 3 1158 24 0 0 0 chrX 75205292 75205316 -91444980 + AT_rich Low_complexity Low_complexity 1 24 0 3 1158 2170 201 55 39 chrX 75205543 75206055 -91444241 - RLTR28 LTR ERVL -3 521 2 3 1158 849 281 97 18 chrX 75206395 75206736 -91443560 + ORR1D2 LTR MaLR 1 368 -2 3 1158 194 0 39 0 chrX 75206769 75206795 -91443501 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1158 1594 208 14 52 chrX 75207227 75207592 -91442704 + Lx4A LINE L1 6701 7051 -7 3 1158 3983 211 38 5 chrX 75207692 75208535 -91441761 - Lx LINE L1 -1 6653 5783 3 1158 345 75 0 0 chrX 75208535 75208588 -91441708 + (TTG)n Simple_repeat Simple_repeat 2 54 0 3 1158 2221 77 0 0 chrX 75208629 75208914 -91441382 + L1Md_F2 LINE L1 5973 6257 -325 3 1158 1183 119 6 0 chrX 75208911 75209088 -91441208 - L1_Mus3 LINE L1 -838 5800 5623 3 1158 1577 274 27 39 chrX 75209197 75209709 -91440587 - MurERV4-int LTR ERVK -4213 1047 542 3 1158 643 320 47 20 chrX 75209952 75209963 -91440333 - Lx5 LINE L1 -4 7046 7038 3 1158 435 100 0 0 chrX 75209963 75210033 -91440263 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 3 1158 643 320 47 20 chrX 75210033 75210276 -91440020 - Lx5 LINE L1 -13 7037 6785 3 1158 3686 171 24 8 chrX 75210281 75211111 -91439185 + L1_Mur2 LINE L1 1133 1974 -3903 3 1158 3720 104 90 5 chrX 75211122 75211701 -91438595 - L1_Mus4 LINE L1 -2 6634 6007 3 1158 237 276 0 0 chrX 75211941 75211999 -91438297 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 1158 617 336 39 39 chrX 75212000 75212285 -91438011 - B4 SINE B4 -2 290 6 3 1158 1646 202 8 44 chrX 75212470 75212854 -91437442 + RLTR14 LTR ERV1 4 373 -9 3 1158 1034 91 17 22 chrX 75213034 75213213 -91437083 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 3 1158 241 258 24 6 chrX 75213625 75213789 -91436507 + (CA)n Simple_repeat Simple_repeat 1 167 0 3 1158 2554 101 103 59 chrX 75215818 75216273 -91434023 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1158 429 182 0 0 chrX 75216273 75216361 -91433935 - RMER15 LTR ERVL -20 555 468 3 1158 616 219 143 42 chrX 75216355 75216427 -91433869 - RMER15 LTR ERVL -309 266 190 3 1158 1918 53 12 4 chrX 75216427 75216675 -91433621 - L1Md_F2 LINE L1 0 6582 6333 3 1158 616 219 143 42 chrX 75216675 75216840 -91433456 - RMER15 LTR ERVL -386 189 5 3 1158 2717 256 57 32 chrX 75216840 75217629 -91432667 - RMER15-int LTR ERVL -36 4963 4155 3 1158 929 295 45 28 chrX 75217683 75218039 -91432257 - RMER15-int LTR ERVL -2600 2399 2038 3 1158 2914 202 18 53 chrX 75218051 75218678 -91431618 + RLTR1D LTR ERV1 1 605 0 3 1158 2672 177 46 56 chrX 75218693 75219462 -91430834 + MMERGLN-int LTR ERV1 15 749 -6807 3 1158 13676 230 12 13 chrX 75219454 75222365 -91427931 + MMERGLN-int LTR ERV1 3070 6163 -1615 3 1158 315 0 0 0 chrX 75222365 75222400 -91427896 + (TTTG)n Simple_repeat Simple_repeat 4 38 0 3 1158 5584 241 21 17 chrX 75222400 75224032 -91426264 + MMERGLN-int LTR ERV1 6164 7777 -1 3 1158 2828 194 19 62 chrX 75224032 75224664 -91425632 + RLTR1D LTR ERV1 1 605 0 3 1158 3747 273 39 37 chrX 75224664 75225947 -91424349 - RMER15-int LTR ERVL -2970 2029 745 3 1158 1427 275 35 7 chrX 75225997 75226426 -91423870 - RMER15-int LTR ERVL -4429 570 130 3 1158 1771 178 6 12 chrX 75226426 75226751 -91423545 + RLTR9B LTR ERVK 115 437 0 3 1158 516 168 6 11 chrX 75227556 75227653 -91422643 + MTC LTR MaLR 279 413 -8 3 1158 380 366 44 26 chrX 75227707 75227934 -91422362 + L1M2 LINE L1 3478 3708 -2435 3 1158 22 56 0 0 chrX 75228307 75228343 -91421953 + AT_rich Low_complexity Low_complexity 1 36 0 3 1158 261 220 17 0 chrX 75228458 75228517 -91421779 + L1M2 LINE L1 4029 4088 -2055 3 1158 225 0 0 0 chrX 75228845 75228870 -91421426 + (GGGTG)n Simple_repeat Simple_repeat 2 26 0 3 1158 4173 186 3 5 chrX 75228960 75229840 -91420456 + Lx2 LINE L1 4576 5454 -423 3 1158 1230 61 0 0 chrX 75229841 75229989 -91420307 + B1_Mus1 SINE Alu 1 148 0 3 1158 325 70 17 17 chrX 75229998 75230056 -91420240 + (CAAAA)n Simple_repeat Simple_repeat 2 59 0 3 1158 7719 159 18 2 chrX 75230056 75231584 -91418712 + Lx2 LINE L1 5447 6997 0 3 1158 357 266 23 12 chrX 75231809 75231980 -91418316 + (TA)n Simple_repeat Simple_repeat 1 173 0 3 1158 279 79 0 0 chrX 75232005 75232043 -91418253 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1158 23 33 0 0 chrX 75233082 75233112 -91417184 + AT_rich Low_complexity Low_complexity 1 30 0 3 1158 217 163 23 0 chrX 75234936 75234979 -91415317 + GA-rich Low_complexity Low_complexity 1 44 0 3 1158 408 82 0 0 chrX 75235251 75235312 -91414984 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 1159 457 192 192 0 chrX 75235332 75235452 -91414844 - B1_Mur3 SINE Alu -6 143 1 3 1159 1046 113 0 0 chrX 75235540 75235681 -91414615 - B1_Mm SINE Alu -6 141 1 3 1159 24 32 0 0 chrX 75235695 75235726 -91414570 + AT_rich Low_complexity Low_complexity 1 31 0 3 1159 569 179 9 19 chrX 75236029 75236137 -91414159 - MTC LTR MaLR -9 412 306 3 1159 2544 194 45 0 chrX 75236138 75236663 -91413633 - L1_Mur1 LINE L1 -531 5355 4820 3 1159 342 0 0 0 chrX 75236663 75236701 -91413595 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1159 2544 194 45 0 chrX 75236701 75236752 -91413544 - L1_Mur1 LINE L1 -1067 4819 4754 3 1159 1021 219 18 9 chrX 75236752 75237090 -91413206 - MTC LTR MaLR -127 294 16 3 1159 293 250 0 0 chrX 75237473 75237537 -91412759 + (TAA)n Simple_repeat Simple_repeat 2 65 0 3 1159 1767 171 8 75 chrX 75238944 75239317 -91410979 - ORR1B1 LTR MaLR 0 394 47 3 1159 312 27 0 0 chrX 75239327 75239364 -91410932 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 1159 4923 135 29 5 chrX 75239368 75240187 -91410109 - Lx3A LINE L1 -16 6965 6127 3 1159 716 290 34 20 chrX 75240256 75240460 -91409836 + B3 SINE B2 10 216 0 3 1159 398 298 43 0 chrX 75240480 75240621 -91409675 + B1_Mur2 SINE Alu 3 149 0 3 1159 21 0 0 0 chrX 75241398 75241419 -91408877 + AT_rich Low_complexity Low_complexity 1 21 0 3 1159 416 316 0 8 chrX 75241660 75241778 -91408518 + B3 SINE B2 95 211 -5 3 1159 12661 154 60 20 chrX 75241936 75242811 -91407485 + L1_Mur2 LINE L1 2768 3685 -2192 3 1159 2763 50 31 26 chrX 75242811 75243163 -91407133 + IAPEY2_LTR LTR ERVK 1 354 -3 3 1159 12661 154 60 20 chrX 75243163 75244967 -91405329 + L1_Mur2 LINE L1 3686 5556 -321 3 1159 5847 78 4 5 chrX 75244972 75245753 -91404543 + L1_Mus2 LINE L1 5785 6564 -2 3 1159 12426 106 38 3 chrX 75245756 75247716 -91402580 + MusHAL1 LINE L1 488 2512 -200 3 1159 216 0 0 0 chrX 75247716 75247740 -91402556 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 1159 12426 106 38 3 chrX 75247740 75247862 -91402434 + MusHAL1 LINE L1 2513 2643 -69 3 1159 2243 82 44 6 chrX 75247861 75248099 -91402197 - L1_Mm LINE L1 -758 5125 4876 3 1159 1159 91 70 0 chrX 75248099 75248285 -91402011 + L1Md_F2 LINE L1 6384 6582 0 3 1159 2243 82 44 6 chrX 75248285 75248389 -91401907 - L1_Mm LINE L1 -1008 4875 4772 3 1159 5080 84 8 1 chrX 75248387 75249243 -91401053 + L1_Mus2 LINE L1 5139 5999 -567 3 1159 688 164 29 43 chrX 75249243 75249453 -91400843 - ETnERV2-int LTR ERVK -4213 3193 2987 3 1159 25560 98 31 10 chrX 75249462 75254205 -91396091 + L1Md_F LINE L1 244 5078 -805 3 1159 1244 181 59 8 chrX 75254218 75254474 -91395822 - RMER16-int LTR ERVK -4883 523 255 3 1159 399 248 25 8 chrX 75254693 75254811 -91395485 - RMER16-int LTR ERVK -6940 304 185 3 1159 513 190 15 121 chrX 75255393 75255525 -91394771 - ETnERV2-int LTR ERVK -218 7188 7071 3 1159 2376 100 5 3 chrX 75255527 75255909 -91394387 - L1_Mm LINE L1 -1590 4293 3911 3 1159 11916 83 3 1 chrX 75255908 75257652 -91392644 - L1_Mm LINE L1 -2494 3389 1642 3 1159 363 198 120 11 chrX 75257660 75257671 -91392625 + RLTR9F LTR ERVK 93 103 -334 3 1159 5135 43 7 0 chrX 75257671 75258291 -91392005 - L1Md_F2 LINE L1 0 6582 5959 3 1159 2057 85 44 0 chrX 75258291 75258586 -91391710 + RLTR9F LTR ERVK 104 411 -4 3 1159 369 0 0 0 chrX 75258590 75258631 -91391665 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1159 922 271 50 3 chrX 75258633 75258973 -91391323 - Lx9 LINE L1 -146 7498 7143 3 1159 947 73 7 0 chrX 75258979 75259116 -91391180 - L1_Mus2 LINE L1 -1 6566 6429 3 1159 1144 98 0 0 chrX 75259118 75259282 -91391014 - L1_Mus2 LINE L1 -290 6276 6113 3 1159 30660 80 3 12 chrX 75259281 75264454 -91385842 - L1Md_A LINE L1 -339 5544 417 3 1159 245 337 0 31 chrX 75264459 75264557 -91385739 + CT-rich Low_complexity Low_complexity 2 96 0 3 1159 3479 23 2 0 chrX 75264755 75265150 -91385146 - MTA_Mm LTR MaLR 0 396 1 3 1159 5744 87 14 2 chrX 75265241 75266057 -91384239 - RLTR22_Mus LTR ERVK -983 825 1 3 1159 1738 146 81 0 chrX 75266057 75266380 -91383916 - L1_Mm LINE L1 -247 5636 5288 3 1159 15538 178 26 61 chrX 75266728 75268587 -91381709 - L1_Mur1 LINE L1 -584 5302 3488 3 1159 531 0 0 0 chrX 75268587 75268646 -91381650 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 1159 15538 178 26 61 chrX 75268646 75270019 -91380277 - L1_Mur1 LINE L1 -2399 3487 2097 3 1159 804 88 9 0 chrX 75270019 75270133 -91380163 - B1_Mus1 SINE Alu 0 148 34 4 1159 15538 178 26 61 chrX 75270133 75270644 -91379652 - L1_Mur1 LINE L1 -2399 2096 1578 3 1159 37731 27 1 6 chrX 75270657 75276855 -91373441 - L1Md_T LINE L1 -2 6580 416 4 1159 5146 125 26 3 chrX 75276858 75278009 -91372287 - L1VL2 LINE L1 -2324 1291 110 4 1159 229 276 0 13 chrX 75278009 75278086 -91372210 - L1_Rod LINE L1 -720 5127 5052 4 1159 268 305 12 0 chrX 75278535 75278617 -91371679 + L1ME3 LINE L1 6011 6093 -69 4 1159 1229 237 45 58 chrX 75278638 75278997 -91371299 - Lx2B LINE L1 -13 6987 6634 4 1159 625 160 111 8 chrX 75279014 75279140 -91371156 + B1_Mur4 SINE Alu 3 141 -9 4 1159 22454 134 76 26 chrX 75279827 75284691 -91365605 - L1_Mus3 LINE L1 -24 6614 1387 4 1159 5033 72 9 0 chrX 75284691 75285354 -91364942 - L1_Mus1 LINE L1 0 6567 5899 4 1159 22454 161 37 24 chrX 75285354 75286467 -91363829 - L1_Mus3 LINE L1 -4497 1386 362 4 1159 2352 56 69 30 chrX 75287216 75287548 -91362748 - IAPLTR4 LTR ERVK 0 345 1 4 1159 6247 249 38 38 chrX 75287548 75290068 -91360228 - IAPLTR3-int LTR ERVK -273 7240 5083 4 1159 746 125 35 49 chrX 75290179 75290322 -91359974 - IAPLTR3-int LTR ERVK -2911 4670 4530 4 1159 472 203 23 2 chrX 75290339 75290457 -91359839 - MMETn-int LTR ERVK -2380 2464 2357 4 1159 6640 110 75 5 chrX 75290459 75291823 -91358473 - ETnERV3-int LTR ERVK -3135 4271 2735 4 1159 487 205 98 0 chrX 75291928 75292040 -91358256 - RMER16-int LTR ERVK -5077 1060 938 4 1159 1139 226 101 41 chrX 75292043 75292485 -91357811 - RMER16-int LTR ERVK -4783 623 299 4 1159 290 177 16 117 chrX 75292680 75292808 -91357488 - MMERVK10C-int LTR ERVK -6629 952 838 4 1159 2262 271 63 73 chrX 75292786 75293750 -91356546 - IAPLTR3-int LTR ERVK -5866 955 1 4 1159 2245 75 73 27 chrX 75293750 75294080 -91356216 - IAPLTR4 LTR ERVK 0 345 1 4 1159 23 54 0 0 chrX 75294588 75294625 -91355671 + AT_rich Low_complexity Low_complexity 1 37 0 4 1159 229 273 58 83 chrX 75294642 75294798 -91355498 + YREP_Mm Unknown Unknown 1121 1272 -540 4 1159 1551 180 26 3 chrX 75294798 75295105 -91355191 - L1_Mur2 LINE L1 -436 5441 5128 4 1159 8456 140 7 4 chrX 75295112 75297416 -91352880 - L1_Mus4 LINE L1 -1 6635 4324 4 1159 8821 144 6 19 chrX 75297411 75298984 -91351312 + Lx2A1 LINE L1 5427 6975 -33 4 1159 278 211 19 62 chrX 75298985 75299147 -91351149 + (TATAA)n Simple_repeat Simple_repeat 4 158 0 4 1159 23 0 0 0 chrX 75299435 75299458 -91350838 + AT_rich Low_complexity Low_complexity 1 23 0 4 1159 825 285 63 21 chrX 75299458 75299791 -91350505 - Lx3B LINE L1 -2 6974 6628 4 1159 1855 84 0 0 chrX 75299770 75300021 -91350275 - Lx3B LINE L1 -930 6043 5793 4 1159 2312 129 0 0 chrX 75300009 75300350 -91349946 + Lx3B LINE L1 5465 5805 -81 4 1159 1904 210 102 28 chrX 75300782 75301243 -91349053 - Lx5 LINE L1 -633 6417 5923 4 1159 318 272 31 31 chrX 75301246 75301375 -91348921 + Lx4B LINE L1 6930 7058 0 4 1159 1214 248 34 26 chrX 75302469 75302864 -91347432 + Lx9 LINE L1 5484 5916 -1728 4 1159 1454 280 48 2 chrX 75302902 75303317 -91346979 + Lx7 LINE L1 6934 7367 -329 4 1159 29 84 0 0 chrX 75303329 75303400 -91346896 + AT_rich Low_complexity Low_complexity 1 71 0 4 1159 1064 245 3 28 chrX 75303490 75303813 -91346483 + Lx7 LINE L1 7382 7696 0 4 1159 1073 269 144 14 chrX 75303829 75304301 -91345995 + Lx9 LINE L1 6972 7509 -135 4 1159 207 0 0 0 chrX 75304301 75304324 -91345972 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1159 1073 269 144 14 chrX 75304324 75304440 -91345856 + Lx9 LINE L1 7510 7636 -8 4 1159 3333 46 2 2 chrX 75306709 75307126 -91343170 - L1Md_F2 LINE L1 -2 6580 6164 4 1159 6552 148 33 110 chrX 75307490 75307677 -91342619 + L1_Mur1 LINE L1 3251 3438 -2448 4 1159 7616 54 6 2 chrX 75307677 75308642 -91341654 + L1Md_F2 LINE L1 5614 6582 0 4 1159 6552 148 33 110 chrX 75308642 75309109 -91341187 + L1_Mur1 LINE L1 3439 3905 -1981 4 1159 793 94 0 25 chrX 75309109 75309229 -91341067 + B1_Mm SINE Alu 1 117 -30 4 1159 6552 148 33 110 chrX 75309229 75309990 -91340306 + L1_Mur1 LINE L1 3906 4667 -1219 4 1159 180 97 0 0 chrX 75310122 75310153 -91340143 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1159 429 20 0 0 chrX 75310310 75310360 -91339936 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 1159 261 0 0 0 chrX 75310360 75310388 -91339908 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 1159 1039 98 13 0 chrX 75311115 75311268 -91339028 + L1_Mus1 LINE L1 6413 6567 0 4 1159 1154 48 7 7 chrX 75312995 75313141 -91337155 + B1_Mm SINE Alu 2 147 0 4 1159 242 20 38 57 chrX 75313142 75313195 -91337101 + (CAAAAA)n Simple_repeat Simple_repeat 1 52 0 4 1159 17089 106 12 9 chrX 75313421 75316706 -91333590 - L1VL4 LINE L1 -56 3503 213 4 1159 284 173 58 0 chrX 75316709 75316761 -91333535 - L1VL4 LINE L1 -6067 235 181 4 1159 809 187 33 0 chrX 75317108 75317290 -91333006 - L1_Mur2 LINE L1 -4401 1476 1289 4 1159 612 239 115 19 chrX 75317284 75317524 -91332772 - L1_Mur2 LINE L1 -5915 1069 799 4 1159 1521 200 32 19 chrX 75317739 75318050 -91332246 + Lx4B LINE L1 6472 6786 -272 4 1159 510 309 55 17 chrX 75318223 75318516 -91331780 + L1_Mur3 LINE L1 5261 5564 -316 4 1159 480 18 0 0 chrX 75318656 75318713 -91331583 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1159 585 0 0 0 chrX 75318714 75318779 -91331517 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 1159 331 229 95 92 chrX 75318779 75318985 -91331311 + L1_Mur3 LINE L1 3677 3956 -2184 4 1159 37 0 0 0 chrX 75319333 75319370 -91330926 + AT_rich Low_complexity Low_complexity 1 37 0 4 1159 258 257 13 51 chrX 75319447 75319525 -91330771 + RLTR18B LTR ERVK 1 75 -437 4 1159 567 82 0 0 chrX 75319527 75319612 -91330684 - L1_Mus2 LINE L1 0 6566 6482 4 1159 319 59 255 0 chrX 75319612 75319663 -91330633 - L1_Mm LINE L1 -543 5340 5277 4 1159 581 269 45 93 chrX 75319952 75320138 -91330158 + Lx9 LINE L1 5072 5260 -587 4 1159 1249 113 21 0 chrX 75320138 75320324 -91329972 + B2_Mm2 SINE B2 3 192 -3 4 1159 581 269 45 93 chrX 75320324 75320490 -91329806 + Lx9 LINE L1 5261 5407 -440 4 1159 271 316 60 30 chrX 75320498 75320734 -91329562 + Lx9 LINE L1 5764 6045 -1599 4 1159 1175 314 62 40 chrX 75320903 75321672 -91328624 + Lx9 LINE L1 6306 7091 -553 4 1159 39530 30 1 6 chrX 75321766 75327814 -91322482 - L1Md_T LINE L1 -1 6581 569 4 1159 233 371 29 23 chrX 75327922 75328093 -91322203 - Lx9 LINE L1 -212 7432 7261 4 1159 1857 207 39 0 chrX 75328213 75328600 -91321696 - Lx LINE L1 -4 6650 6249 4 1159 923 124 7 4 chrX 75328600 75328759 -91321537 - L1_Mm LINE L1 -412 5471 5312 4 1159 412 308 79 34 chrX 75328768 75329060 -91321236 - L1_Mur3 LINE L1 -315 5565 5261 4 1159 1615 254 4 3 chrX 75329190 75329552 -91320744 - Lx5 LINE L1 -191 6790 6425 4 1159 1846 205 10 18 chrX 75329644 75330268 -91320028 + L1_Mur2 LINE L1 854 1476 -4401 4 1159 1483 96 0 19 chrX 75330608 75330821 -91319475 - L1_Mus1 LINE L1 -1 6566 6358 4 1159 180 0 0 0 chrX 75331782 75331802 -91318494 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 1159 5851 152 36 3 chrX 75331836 75332834 -91317462 + Lx3C LINE L1 5895 6925 -51 4 1159 22 0 0 0 chrX 75334604 75334626 -91315670 + AT_rich Low_complexity Low_complexity 1 22 0 4 1159 262 241 0 0 chrX 75337367 75337425 -91312871 - Lx9 LINE L1 -217 7427 7370 4 1159 4782 65 6 2 chrX 75337434 75338055 -91312241 - L1Md_F2 LINE L1 -5 6577 5954 4 1159 627 247 0 42 chrX 75338394 75338584 -91311712 - Lx7 LINE L1 -1 7695 7514 4 1159 1511 271 37 9 chrX 75338568 75339023 -91311273 - Lx7 LINE L1 -327 7369 6902 4 1159 1324 244 10 23 chrX 75339047 75339432 -91310864 - Lx9 LINE L1 -1728 5916 5501 4 1159 1037 105 0 0 chrX 75340960 75341113 -91309183 - L1_Mus1 LINE L1 -1 6566 6414 4 1159 5955 83 4 7 chrX 75342420 75343237 -91307059 - L1_Mus1 LINE L1 -1 6566 5753 4 1159 26 30 0 0 chrX 75344416 75344449 -91305847 + AT_rich Low_complexity Low_complexity 1 33 0 4 1159 302 338 19 12 chrX 75344867 75345029 -91305267 - Lx9 LINE L1 -215 7429 7267 4 1159 6742 127 2 4 chrX 75345072 75346395 -91303901 - L1_Mus3 LINE L1 0 6638 5316 4 1159 1747 126 117 12 chrX 75346396 75346855 -91303441 + L1_Mus1 LINE L1 6078 6974 -2 4 1159 708 304 38 26 chrX 75346883 75347309 -91302987 - L1_Rod LINE L1 -1404 4476 4034 4 1159 6242 138 49 3 chrX 75347308 75348432 -91301864 - Lx LINE L1 -20 6634 5459 4 1159 4605 50 31 2 chrX 75348487 75349066 -91301230 - L1Md_F2 LINE L1 -3 6579 5984 4 1159 1949 97 33 36 chrX 75349067 75349399 -91300897 + Lx3_Mus LINE L1 3400 3730 -2156 4 1159 2004 138 3 0 chrX 75349410 75349750 -91300546 - L1_Mur1 LINE L1 -2486 3400 3060 4 1159 10074 99 17 2 chrX 75349750 75351350 -91298946 + Lx3_Mus LINE L1 4416 6031 -978 4 1159 363 44 0 0 chrX 75351350 75351395 -91298901 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1159 6173 91 36 1 chrX 75351395 75351838 -91298458 + Lx3_Mus LINE L1 6032 6494 -515 4 1159 525 148 243 7 chrX 75351835 75351971 -91298325 + Lx3_Mus LINE L1 6842 7009 0 4 1159 8572 123 8 14 chrX 75351983 75353437 -91296859 + MusHAL1 LINE L1 800 2244 -468 4 1159 323 108 0 30 chrX 75353437 75353504 -91296792 + Lx LINE L1 6590 6654 0 4 1159 447 115 0 0 chrX 75353713 75353791 -91296505 - Lx2A LINE L1 0 7008 6931 4 1159 8225 144 53 4 chrX 75353791 75355489 -91294807 - Lx2A LINE L1 -32 6976 5195 4 1159 5866 103 5 1 chrX 75355491 75356335 -91293961 + L1_Mus4 LINE L1 5783 6629 -7 4 1159 4004 50 0 0 chrX 75356883 75357365 -91292931 + LTRIS_Mm LTR ERV1 1 482 0 4 1159 13341 51 10 0 chrX 75357395 75359773 -91290523 - L1Md_F3 LINE L1 0 6584 4181 4 1159 2787 185 18 124 chrX 75360656 75361299 -91288997 + L1_Mus1 LINE L1 584 1205 -5411 4 1159 1103 63 0 14 chrX 75361299 75361443 -91288853 + B1_Mus1 SINE Alu 2 143 -5 4 1159 11791 119 355 12 chrX 75361443 75365358 -91284938 + L1_Mus1 LINE L1 1188 6566 -1 4 1160 1037 105 0 0 chrX 75366665 75366818 -91283478 + L1_Mus1 LINE L1 6414 6566 -1 4 1160 1324 244 10 23 chrX 75368346 75368731 -91281565 + Lx9 LINE L1 5501 5916 -1728 4 1160 1548 271 23 7 chrX 75368755 75369193 -91281103 + Lx7 LINE L1 6902 7346 -350 4 1160 26 0 0 0 chrX 75369230 75369256 -91281040 + AT_rich Low_complexity Low_complexity 1 26 0 4 1160 978 267 9 30 chrX 75369390 75369722 -91280574 + Lx7 LINE L1 7372 7696 0 4 1160 290 342 139 0 chrX 75369822 75370161 -91280135 + Lx9 LINE L1 7070 7455 -189 4 1160 195 100 0 0 chrX 75370174 75370204 -91280092 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1160 251 246 9 0 chrX 75374695 75374805 -91275491 + (TA)n Simple_repeat Simple_repeat 1 111 0 4 1160 8559 144 9 14 chrX 75376484 75376711 -91273585 - Lx3C LINE L1 -7 6969 6758 4 1160 405 0 0 0 chrX 75376711 75376756 -91273540 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1160 8868 140 18 20 chrX 75376756 75379199 -91271097 - Lx3C LINE L1 -219 6757 4314 4 1160 4457 201 138 3 chrX 75379739 75380789 -91269507 - Lx2B LINE L1 -5 6995 5804 4 1160 5348 174 20 23 chrX 75380790 75381914 -91268382 - Lx3C LINE L1 -1787 4099 2979 4 1160 1345 146 8 25 chrX 75381908 75382202 -91268094 - L1_Mm LINE L1 -3637 2246 1962 4 1160 697 299 53 9 chrX 75382295 75382622 -91267674 + L1_Mur3 LINE L1 5245 5618 -2167 4 1160 501 47 0 0 chrX 75382769 75382833 -91267463 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 1160 840 289 70 38 chrX 75382886 75383434 -91266862 + L1_Rod LINE L1 3677 4275 -1572 5 1160 845 276 30 13 chrX 75383511 75383812 -91266484 + L1_Rod LINE L1 5542 5847 0 5 1160 25 65 0 0 chrX 75384097 75384143 -91266153 + AT_rich Low_complexity Low_complexity 1 46 0 5 1160 31693 42 0 3 chrX 75384774 75391006 -91259290 - L1Md_T LINE L1 -2 6583 271 5 1160 2306 251 14 27 chrX 75391099 75391663 -91258633 - Lx5 LINE L1 -12 7038 6482 5 1160 1611 200 7 0 chrX 75391656 75391961 -91258335 + L1_Mur2 LINE L1 5550 5856 -21 5 1160 239 50 0 48 chrX 75391997 75392039 -91258257 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 5 1160 1042 76 21 0 chrX 75392039 75392184 -91258112 - B1_Mus1 SINE Alu 0 148 1 5 1160 275 246 15 23 chrX 75392727 75392860 -91257436 - Lx9 LINE L1 0 7644 7513 5 1160 318 26 0 0 chrX 75393960 75393999 -91256297 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1160 432 86 0 0 chrX 75394003 75394073 -91256223 + (GA)n Simple_repeat Simple_repeat 1 70 0 5 1160 317 211 0 40 chrX 75394158 75394232 -91256064 + Lx9 LINE L1 5508 5578 -269 5 1160 180 200 0 0 chrX 75394250 75394290 -91256006 + T-rich Low_complexity Low_complexity 1 40 0 5 1160 936 249 17 13 chrX 75394290 75394573 -91255723 + Lx9 LINE L1 5598 5917 -1727 5 1160 914 277 68 4 chrX 75394593 75394872 -91255424 + Lx7 LINE L1 6899 7195 -501 5 1160 974 278 93 0 chrX 75394962 75395296 -91255000 + Lx9 LINE L1 7097 7461 -183 5 1160 189 121 0 0 chrX 75395303 75395336 -91254960 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 1160 572 170 22 0 chrX 75395343 75395478 -91254818 + Lx9 LINE L1 7506 7643 -1 5 1160 239 322 62 50 chrX 75395525 75395685 -91254611 + Lx9 LINE L1 6239 6400 -1073 5 1160 3796 126 3 50 chrX 75397119 75397936 -91252360 + L1VL4 LINE L1 302 1070 -2489 5 1160 7914 164 14 3 chrX 75397935 75399337 -91250959 - L1_Mur2 LINE L1 -626 5251 3835 5 1160 3379 162 7 0 chrX 75399338 75399907 -91250389 + L1_Mm LINE L1 5254 5826 -57 5 1160 28881 98 49 14 chrX 75400052 75405244 -91245052 + L1Md_F2 LINE L1 226 5585 -298 5 1160 8022 44 2 0 chrX 75405245 75406243 -91244053 + L1Md_F2 LINE L1 5587 6582 0 5 1160 636 244 63 81 chrX 75407370 75407704 -91242592 + L1_Mur3 LINE L1 5255 5582 -298 5 1160 20587 118 4 15 chrX 75407708 75411763 -91238533 + L1_Mus1 LINE L1 2559 6564 -3 5 1160 441 129 0 0 chrX 75411930 75412023 -91238273 + (GA)n Simple_repeat Simple_repeat 2 94 0 5 1160 587 304 62 35 chrX 75412035 75412406 -91237890 + L1_Rod LINE L1 3704 4084 -2059 5 1160 1952 236 122 14 chrX 75412409 75412964 -91237332 + RLTR17 LTR ERVK 1 615 -77 5 1160 375 237 44 44 chrX 75412994 75413131 -91237165 + L1_Rod LINE L1 4053 4189 -1658 5 1160 22 26 0 25 chrX 75413131 75413142 -91237154 + AT_rich Low_complexity Low_complexity 1 11 0 5 1160 543 201 15 15 chrX 75413142 75413278 -91237018 + Lx4A LINE L1 6921 7056 -2 5 1160 22 26 0 25 chrX 75413278 75413306 -91236990 + AT_rich Low_complexity Low_complexity 1 28 0 5 1160 1059 231 13 20 chrX 75413308 75413609 -91236687 + L1VL1 LINE L1 1 299 -6123 5 1160 6597 26 1 0 chrX 75413589 75414584 -91235712 - L1Md_T LINE L1 -221 6361 5366 5 1160 2037 37 4 0 chrX 75414585 75414831 -91235465 + L1Md_T LINE L1 6336 6582 0 5 1160 381 234 0 0 chrX 75414838 75414932 -91235364 + L1Md_F LINE L1 235 328 -6191 5 1160 543 250 0 0 chrX 75414929 75415049 -91235247 + L1Md_F3 LINE L1 309 428 -6191 5 1160 264 163 0 0 chrX 75415047 75415090 -91235206 + L1Md_F3 LINE L1 590 632 -5987 5 1160 33814 58 3 2 chrX 75415090 75419784 -91230512 + L1Md_F3 LINE L1 794 5589 -297 5 1160 7454 62 12 0 chrX 75419784 75420756 -91229540 + L1Md_F3 LINE L1 5590 6573 -14 5 1160 5733 151 42 7 chrX 75420941 75421969 -91228327 - Lx3A LINE L1 -6 6975 5912 5 1160 2308 90 20 9 chrX 75421971 75422320 -91227976 + L1_Mur1 LINE L1 4952 5304 -582 5 1160 1727 245 36 122 chrX 75422448 75422997 -91227299 + RLTR18B LTR ERVK 3 504 -8 5 1160 280 294 69 40 chrX 75423782 75423984 -91226312 + Lx9 LINE L1 7384 7591 -53 5 1160 264 77 0 0 chrX 75424147 75424186 -91226110 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 1160 842 269 7 37 chrX 75424188 75424458 -91225838 - Lx9 LINE L1 -226 7418 7157 5 1160 42 20 0 0 chrX 75424791 75424840 -91225456 + AT_rich Low_complexity Low_complexity 1 49 0 5 1160 1607 150 80 0 chrX 75427037 75427323 -91222973 + Lx2 LINE L1 6688 6996 -1 5 1160 522 114 0 0 chrX 75427722 75427810 -91222486 + (GA)n Simple_repeat Simple_repeat 2 89 0 5 1160 22 56 0 0 chrX 75428660 75428696 -91221600 + AT_rich Low_complexity Low_complexity 1 36 0 5 1160 1033 281 11 19 chrX 75429236 75429606 -91220690 + L1_Rod LINE L1 5479 5845 -2 5 1160 746 303 123 19 chrX 75429666 75430087 -91220209 + Lx7 LINE L1 6902 7366 -330 5 1160 238 260 0 0 chrX 75430133 75430183 -91220113 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1160 523 240 69 75 chrX 75430198 75430504 -91219792 + Lx7 LINE L1 7393 7696 0 5 1160 417 302 72 41 chrX 75430529 75430750 -91219546 + Lx9 LINE L1 6979 7206 -438 5 1160 470 249 18 92 chrX 75430755 75431038 -91219258 + Lx9 LINE L1 7375 7636 -8 5 1160 530 197 8 0 chrX 75433532 75433649 -91216647 + (TA)n Simple_repeat Simple_repeat 2 119 0 5 1160 450 0 0 0 chrX 75434719 75434769 -91215527 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 1160 417 20 0 0 chrX 75434769 75434818 -91215478 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1160 243 0 0 0 chrX 75435177 75435204 -91215092 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 5 1160 23 0 0 0 chrX 75436094 75436117 -91214179 + AT_rich Low_complexity Low_complexity 1 23 0 5 1160 327 181 0 0 chrX 75436520 75436592 -91213704 + (TATG)n Simple_repeat Simple_repeat 1 72 0 5 1160 423 0 0 0 chrX 75436593 75436640 -91213656 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 5 1160 315 0 0 0 chrX 75438288 75438323 -91211973 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1160 2711 244 64 17 chrX 75438884 75439538 -91210758 + RMER13A LTR ERVK 1 685 -175 5 1160 477 359 77 11 chrX 75439587 75439770 -91210526 + RMER13A LTR ERVK 666 860 0 5 1160 2773 62 73 0 chrX 75440222 75440592 -91209704 - L1_Mm LINE L1 -75 5808 5412 5 1160 4554 78 2 20 chrX 75440592 75441229 -91209067 + L1Md_F2 LINE L1 5955 6579 -3 5 1160 236 235 14 56 chrX 75441335 75441407 -91208889 + L1_Mur3 LINE L1 3734 3802 -2078 5 1160 636 286 57 23 chrX 75441660 75441961 -91208335 + L1_Rod LINE L1 4804 5114 -733 5 1160 24 0 0 0 chrX 75442538 75442562 -91207734 + AT_rich Low_complexity Low_complexity 1 24 0 5 1160 1164 238 75 141 chrX 75442636 75443105 -91207191 + RLTR18B LTR ERVK 75 512 0 5 1160 587 109 0 0 chrX 75443764 75443856 -91206440 + RLTR45-int LTR ERVK 2571 2662 -4582 5 1160 9424 139 45 26 chrX 75443846 75445613 -91204683 + ETnERV2-int LTR ERVK 1709 3448 -3958 5 1160 4110 172 50 47 chrX 75445907 75447732 -91202564 + ETnERV2-int LTR ERVK 2356 4094 -3312 5 1160 904 230 20 0 chrX 75447770 75447974 -91202322 + ETnERV2-int LTR ERVK 6222 6429 -977 5 1160 405 160 13 0 chrX 75448182 75448257 -91202039 + ETnERV2-int LTR ERVK 7329 7404 -2 5 1160 1522 85 59 4 chrX 75448258 75448495 -91201801 + RLTR9D LTR ERVK 1 250 -153 5 1160 332 115 0 0 chrX 75448484 75448536 -91201760 + RLTR9D LTR ERVK 360 411 -4 5 1160 494 120 13 0 chrX 75448537 75448612 -91201684 - L1_Mm LINE L1 -696 5187 5112 5 1160 1327 53 0 12 chrX 75448612 75448626 -91201670 - B2_Mm1a SINE B2 -22 171 159 5 1160 342 61 0 0 chrX 75448626 75448675 -91201621 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 5 1160 1327 53 0 12 chrX 75448675 75448833 -91201463 - B2_Mm1a SINE B2 -35 158 1 5 1160 12969 117 2 8 chrX 75448833 75450775 -91199521 - L1_Mm LINE L1 -772 5111 3182 5 1160 190 0 67 0 chrX 75450775 75450805 -91199491 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 1160 12969 117 2 8 chrX 75450805 75450891 -91199405 - L1_Mm LINE L1 -2702 3181 3096 5 1160 35619 61 4 3 chrX 75451211 75453645 -91196651 - L1Md_F2 LINE L1 -2 6580 4135 5 1160 3340 43 0 0 chrX 75453645 75454041 -91196255 - MTA_Mm LTR MaLR 0 396 1 5 1160 35619 63 4 12 chrX 75454041 75457296 -91193000 - L1Md_F2 LINE L1 -1749 4134 928 5 1160 393 278 0 27 chrX 75457281 75457392 -91192904 - L1Md_F2 LINE L1 -6181 435 328 5 1160 977 218 11 40 chrX 75457393 75457670 -91192626 - L1VL1 LINE L1 -6137 285 17 5 1160 187 133 0 0 chrX 75457801 75457831 -91192465 - L3 LINE CR1 -4357 132 103 5 1160 749 285 47 50 chrX 75458075 75458415 -91191881 - Lx9 LINE L1 -149 7495 7157 5 1160 29 0 0 0 chrX 75458503 75458532 -91191764 + AT_rich Low_complexity Low_complexity 1 29 0 5 1160 448 256 71 76 chrX 75458825 75458950 -91191346 + RLTR20D LTR ERVK 50 168 -400 5 1160 543 16 0 0 chrX 75458950 75459014 -91191282 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 1160 448 311 73 81 chrX 75459014 75459248 -91191048 + RLTR20D LTR ERVK 169 434 -258 5 1160 516 32 0 0 chrX 75459916 75459978 -91190318 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 1160 657 85 0 0 chrX 75459980 75460086 -91190210 + (GA)n Simple_repeat Simple_repeat 2 107 0 5 1160 2007 157 9 6 chrX 75461037 75461382 -91188914 - ORR1A1 LTR MaLR 0 346 1 5 1160 7537 58 9 1 chrX 75461562 75462896 -91187400 - L1Md_F2 LINE L1 -13 6569 5222 5 1160 1114 93 6 0 chrX 75462896 75463057 -91187239 + L1Md_F2 LINE L1 5066 5227 -656 5 1160 1780 85 11 19 chrX 75463130 75463394 -91186902 - L1_Mus2 LINE L1 0 6566 6305 5 1160 5112 124 9 5 chrX 75463782 75464569 -91185727 - Lx LINE L1 -7 6647 5858 5 1160 4024 99 15 0 chrX 75464569 75465261 -91185035 + MusHAL1 LINE L1 598 1297 -2056 5 1160 32937 86 20 11 chrX 75465758 75472233 -91178063 - L1Md_F2 LINE L1 -4 6581 102 5 1160 1061 218 49 29 chrX 75472233 75472489 -91177807 - RLTR25B LTR ERVK -836 267 1 5 1160 874 294 32 14 chrX 75472489 75472772 -91177524 + MERVK26-int LTR ERVK 2887 3174 -3745 5 1160 5963 131 53 16 chrX 75472774 75474367 -91175929 - L1_Mur1 LINE L1 -3786 2100 115 5 1160 519 328 19 31 chrX 75474351 75474574 -91175722 - L1_Rod LINE L1 -1833 4014 3797 5 1160 3617 131 11 19 chrX 75474574 75475142 -91175154 - RMER2 LTR ERV1 0 567 5 5 1160 519 328 19 31 chrX 75475142 75475239 -91175057 - L1_Rod LINE L1 -2051 3796 3698 5 1160 1431 126 5 0 chrX 75475292 75475514 -91174782 - Lx2 LINE L1 0 6997 6775 5 1160 728 211 0 0 chrX 75475512 75475645 -91174651 - Lx2 LINE L1 -352 6645 6513 5 1160 611 273 12 0 chrX 75475642 75475807 -91174489 - L1_Rod LINE L1 -1088 4759 4593 5 1160 380 181 0 14 chrX 75475815 75475888 -91174408 + L1_Rod LINE L1 4953 5024 -823 5 1160 216 0 0 0 chrX 75475901 75475925 -91174371 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 1160 283 259 37 0 chrX 75475929 75476037 -91174259 + Lx9 LINE L1 7513 7624 -20 5 1160 599 189 0 8 chrX 75476061 75476189 -91174107 + GA-rich Low_complexity Low_complexity 3 129 0 5 1160 35179 36 1 0 chrX 75476203 75481903 -91168393 + L1Md_T LINE L1 1 5589 -297 5 1160 8908 7 0 5 chrX 75481903 75482957 -91167339 + L1Md_T LINE L1 5590 6585 0 5 1160 1970 127 0 26 chrX 75482959 75483267 -91167029 - Lx2 LINE L1 -468 6529 6230 5 1160 211 143 0 45 chrX 75483462 75483506 -91166790 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1160 2616 247 60 88 chrX 75483671 75484556 -91165740 - RMER13A LTR ERVK 0 860 1 5 1160 225 0 0 0 chrX 75485120 75485145 -91165151 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1160 351 0 0 0 chrX 75486792 75486831 -91163465 + (TAGA)n Simple_repeat Simple_repeat 3 41 0 5 1160 296 193 18 18 chrX 75486837 75486948 -91163348 + (TA)n Simple_repeat Simple_repeat 1 111 0 5 1160 207 0 0 0 chrX 75488219 75488242 -91162054 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 6 1160 327 25 0 0 chrX 75488601 75488641 -91161655 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1160 432 0 0 0 chrX 75488641 75488688 -91161608 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 1160 521 211 8 0 chrX 75489760 75489883 -91160413 + (TA)n Simple_repeat Simple_repeat 2 125 0 6 1160 485 242 22 105 chrX 75492376 75492653 -91157643 - Lx9 LINE L1 -8 7636 7383 6 1160 365 336 51 25 chrX 75492653 75492888 -91157408 - Lx9 LINE L1 -425 7219 6979 6 1160 1179 261 85 137 chrX 75492915 75493253 -91157043 - Lx7 LINE L1 0 7696 7421 6 1160 354 45 0 0 chrX 75493253 75493297 -91156999 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1160 1179 261 85 137 chrX 75493297 75493797 -91156499 - Lx7 LINE L1 -276 7420 6902 6 1160 1025 293 22 17 chrX 75493855 75494258 -91156038 - L1_Rod LINE L1 0 5847 5443 6 1160 271 233 14 14 chrX 75495636 75495710 -91154586 + CT-rich Low_complexity Low_complexity 2 75 0 6 1160 1710 152 33 10 chrX 75496096 75496402 -91153894 - Lx LINE L1 0 6654 6342 6 1160 1869 126 110 17 chrX 75496451 75496543 -91153753 - L1_Mus3 LINE L1 0 6638 6539 6 1160 186 43 0 0 chrX 75496543 75496566 -91153730 + (CCCCCT)n Simple_repeat Simple_repeat 1 23 0 6 1160 1869 126 110 17 chrX 75496566 75496828 -91153468 - L1_Mus3 LINE L1 -100 6538 6251 6 1160 286 53 0 0 chrX 75496827 75496865 -91153431 + Lx2 LINE L1 6501 6538 -459 6 1160 394 150 0 0 chrX 75496858 75496918 -91153378 + L1_Mus3 LINE L1 6218 6277 -361 6 1161 284 153 16 48 chrX 75498046 75498170 -91152126 + T-rich Low_complexity Low_complexity 1 120 0 6 1161 6328 135 23 48 chrX 75498531 75500000 -91150296 + L1VL1 LINE L1 2 1425 -2273 6 1161 20618 137 41 15 chrX 75500000 75502480 -91147816 + L1_Mus3 LINE L1 1642 4194 -1689 1 1161 414 0 0 0 chrX 75502480 75502526 -91147770 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 1161 20618 142 41 16 chrX 75502526 75503747 -91146549 + L1_Mus3 LINE L1 4195 5467 -892 1 1161 4287 119 25 0 chrX 75503734 75504372 -91145924 + L1_Mus3 LINE L1 5753 6406 -232 1 1161 623 119 8 0 chrX 75504372 75504498 -91145798 + (TA)n Simple_repeat Simple_repeat 1 127 0 3 1161 296 163 20 20 chrX 75504502 75504595 -91145701 + L1_Mm LINE L1 5346 5467 -892 4 1161 371 60 0 0 chrX 75504582 75504632 -91145664 + L1_Mus3 LINE L1 5753 5802 -836 5 1161 445 155 0 18 chrX 75504639 75504751 -91145545 + (TA)n Simple_repeat Simple_repeat 2 111 0 6 1161 652 100 25 0 chrX 75504754 75504874 -91145422 + L1_Mus3 LINE L1 6508 6630 -8 5 1161 1202 341 66 40 chrX 75505375 75506371 -91143925 - Lx9 LINE L1 -208 7436 6415 7 1161 216 222 0 31 chrX 75506445 75506510 -91143786 + (TATATG)n Simple_repeat Simple_repeat 3 65 0 8 1161 1290 290 25 16 chrX 75506711 75507295 -91143001 - Lx9 LINE L1 -1651 5993 5374 7 1161 8317 189 34 34 chrX 75507290 75510378 -91139918 + Lx2B LINE L1 3917 7000 0 9 1161 3095 189 146 46 chrX 75510504 75511202 -91139094 - RMER13A LTR ERVK -90 770 3 1 1161 6287 76 11 3 chrX 75511565 75513264 -91137032 + L1Md_F2 LINE L1 410 2121 -3762 1 1161 7401 16 0 0 chrX 75513262 75514114 -91136182 + L1Md_T LINE L1 4735 5586 -297 1 1161 8457 32 0 0 chrX 75514114 75515110 -91135186 + L1Md_T LINE L1 5587 6582 0 1 1161 25490 80 1 7 chrX 75515111 75518608 -91131688 + L1Md_F2 LINE L1 2110 5585 -298 1 1161 8136 41 3 3 chrX 75518609 75519603 -91130693 + L1Md_F2 LINE L1 5587 6580 -2 1 1161 3340 168 184 25 chrX 75519605 75520277 -91130019 + RLTR25A LTR ERVK 181 978 -125 1 1161 243 0 0 0 chrX 75520277 75520304 -91129992 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1161 450 0 0 0 chrX 75520304 75520353 -91129943 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 1161 3340 168 184 25 chrX 75520353 75520456 -91129840 + RLTR25A LTR ERVK 979 1080 -23 1 1161 1170 304 0 0 chrX 75520589 75520892 -91129404 - MERVK26-int LTR ERVK -4034 2885 2583 1 1161 2000 291 22 19 chrX 75521024 75521664 -91128632 - MERVK26-int LTR ERVK -4502 2417 1776 1 1161 1739 149 3 82 chrX 75521672 75522002 -91128294 - ORR1A4 LTR MaLR -8 321 18 1 1161 3397 190 30 9 chrX 75522069 75522303 -91127993 - Lx4A LINE L1 0 7058 6819 1 1161 2138 116 21 15 chrX 75522303 75522628 -91127668 - ORR1A2 LTR MaLR 0 327 1 1 1161 3397 190 30 9 chrX 75522628 75523058 -91127238 - Lx4A LINE L1 -240 6818 6380 1 1161 476 227 10 0 chrX 75523058 75523155 -91127141 - Lx4A LINE L1 -878 6180 6083 1 1161 890 189 25 142 chrX 75523156 75523521 -91126775 + RLTRETN_Mm LTR ERVK 1 322 0 2 1161 5304 138 52 84 chrX 75523525 75524016 -91126280 + ETnERV2-int LTR ERVK 3 474 -4370 2 1161 489 17 0 0 chrX 75524016 75524074 -91126222 + (CAAA)n Simple_repeat Simple_repeat 1 58 0 2 1161 5304 138 52 84 chrX 75524074 75524748 -91125548 + ETnERV2-int LTR ERVK 475 1130 -3714 2 1161 6336 176 40 50 chrX 75524771 75528412 -91121884 + ETnERV2-int LTR ERVK 1565 7203 -203 2 1161 454 235 183 19 chrX 75528412 75528712 -91121584 + RLTR13D6 LTR ERVK 153 537 -365 2 1161 500 66 24 73 chrX 75528712 75528794 -91121502 + ETnERV2-int LTR ERVK 7329 7406 0 2 1161 1023 177 34 148 chrX 75528800 75529158 -91121138 + RLTRETN_Mm LTR ERVK 6 322 0 2 1161 627 313 25 0 chrX 75529237 75529435 -91120861 - MYSERV-int LTR ERVK -2134 4416 4214 2 1161 711 160 60 10 chrX 75529456 75529653 -91120643 - MYSERV6-int LTR ERVK -6191 2768 2530 2 1161 3285 168 78 17 chrX 75529671 75530312 -91119984 - RLTR25A LTR ERVK -423 680 1 2 1161 28849 108 6 35 chrX 75531143 75532950 -91117346 + L1VL1 LINE L1 217 1977 -3906 2 1161 180 77 0 0 chrX 75532950 75532976 -91117320 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 1161 28849 101 4 9 chrX 75532976 75534371 -91115925 + L1VL1 LINE L1 1978 3377 -2506 2 1161 1758 58 4 4 chrX 75534371 75534598 -91115698 - L1Md_T LINE L1 -1 6581 6355 2 1161 28849 101 4 9 chrX 75534598 75536759 -91113537 + L1VL1 LINE L1 3378 5505 -378 2 1161 8702 60 2 0 chrX 75536768 75537880 -91112416 + L1_Mm LINE L1 4764 5877 -6 2 1161 29051 72 75 18 chrX 75537877 75542706 -91107590 + L1Md_F2 LINE L1 486 5586 -297 3 1161 7681 64 4 1 chrX 75542706 75543697 -91106599 + L1Md_F2 LINE L1 5589 6582 0 3 1161 5548 54 6 1 chrX 75543693 75544398 -91105898 + L1Md_F3 LINE L1 5862 6569 -15 3 1161 1852 188 17 8 chrX 75544726 75545080 -91105216 + Lx4B LINE L1 6640 6996 -62 3 1161 21 0 0 0 chrX 75545684 75545705 -91104591 + AT_rich Low_complexity Low_complexity 1 21 0 3 1161 32 67 0 0 chrX 75546190 75546250 -91104046 + AT_rich Low_complexity Low_complexity 1 60 0 3 1161 1153 61 0 13 chrX 75546798 75546947 -91103349 - B1_Mm SINE Alu 0 147 1 3 1161 23 33 0 0 chrX 75547815 75547845 -91102451 + AT_rich Low_complexity Low_complexity 1 30 0 3 1161 8839 132 9 24 chrX 75548482 75550240 -91100056 + Lx2 LINE L1 5264 6997 0 3 1161 402 203 25 0 chrX 75551020 75551138 -91099158 + (TA)n Simple_repeat Simple_repeat 1 121 0 3 1161 23 33 0 0 chrX 75551629 75551659 -91098637 + AT_rich Low_complexity Low_complexity 1 30 0 3 1161 29 28 0 0 chrX 75551743 75551779 -91098517 + AT_rich Low_complexity Low_complexity 1 36 0 4 1161 865 135 134 6 chrX 75551788 75551952 -91098344 - B2_Mm2 SINE B2 -9 186 2 4 1161 2750 223 28 0 chrX 75553094 75553822 -91096474 + Lx3C LINE L1 5152 5934 -1042 4 1161 1235 67 0 0 chrX 75553822 75553986 -91096310 + L1_Mus1 LINE L1 6399 6562 -5 4 1161 2343 243 95 1 chrX 75553986 75554332 -91095964 + Lx3C LINE L1 5935 6323 -653 4 1161 2810 35 0 0 chrX 75554341 75554684 -91095612 - ORR1A0 LTR MaLR -3 343 1 4 1161 2359 240 6 10 chrX 75554684 75555190 -91095106 + Lx2B LINE L1 6328 6831 -169 4 1161 464 130 95 32 chrX 75555190 75555285 -91095011 + RLTR13C2 LTR ERVK 708 808 0 4 1161 251 259 72 48 chrX 75555286 75555452 -91094844 + Lx2B LINE L1 6828 6997 0 4 1161 987 333 60 25 chrX 75555546 75556217 -91094079 + Lx8 LINE L1 6237 6930 -543 4 1161 1098 249 4 0 chrX 75556777 75557030 -91093266 + Lx6 LINE L1 7202 7455 -5 4 1161 22 35 0 0 chrX 75557051 75557080 -91093216 + AT_rich Low_complexity Low_complexity 1 29 0 4 1161 213 247 25 0 chrX 75557212 75557293 -91093003 + A-rich Low_complexity Low_complexity 2 84 0 5 1161 21 0 0 0 chrX 75557627 75557648 -91092648 + AT_rich Low_complexity Low_complexity 1 21 0 5 1161 1715 15 0 0 chrX 75558660 75558863 -91091433 + L1Md_T LINE L1 5384 5586 -297 5 1161 8943 9 0 0 chrX 75558863 75559859 -91090437 + L1Md_T LINE L1 5587 6582 0 5 1161 23 54 0 0 chrX 75559955 75559992 -91090304 + AT_rich Low_complexity Low_complexity 1 37 0 5 1161 414 0 0 0 chrX 75560118 75560164 -91090132 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1161 330 26 0 0 chrX 75560164 75560202 -91090094 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1161 210 147 0 0 chrX 75560382 75560416 -91089880 + (CATATA)n Simple_repeat Simple_repeat 1 34 0 5 1161 25 0 0 0 chrX 75561778 75561803 -91088493 + AT_rich Low_complexity Low_complexity 1 25 0 5 1161 1301 294 165 30 chrX 75563017 75563613 -91086683 - Lx6 LINE L1 -4 7456 6748 5 1161 269 48 48 0 chrX 75563613 75563655 -91086641 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 5 1161 1301 294 165 30 chrX 75563655 75563702 -91086594 - Lx6 LINE L1 -713 6747 6708 5 1161 940 104 45 0 chrX 75563702 75563856 -91086440 - L1_Mus2 LINE L1 -1 6565 6405 6 1161 1301 294 165 30 chrX 75563856 75563981 -91086315 - Lx6 LINE L1 -753 6707 6583 5 1161 469 217 314 5 chrX 75564159 75564344 -91085952 - Lx5 LINE L1 -4 7046 6805 6 1161 1792 162 12 3 chrX 75564345 75564680 -91085616 - L1_Mur2 LINE L1 -646 5231 4894 6 1161 270 259 35 141 chrX 75565803 75566001 -91084295 - B2_Mm2 SINE B2 -5 190 14 6 1161 1476 277 55 3 chrX 75566857 75567425 -91082871 - MYSERV6-int LTR ERVK -7911 1048 452 6 1161 875 56 16 0 chrX 75568344 75568469 -91081827 - L1_Mus2 LINE L1 -2 6564 6438 6 1161 2555 63 0 0 chrX 75568486 75568803 -91081493 - L1_Mus1 LINE L1 -2 6565 6249 6 1161 521 167 0 10 chrX 75569544 75569641 -91080655 - BGLII_B LTR ERVK -10 431 336 6 1161 278 26 0 25 chrX 75569652 75569692 -91080604 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 1161 1377 211 61 72 chrX 75569696 75570170 -91080126 - Lx7 LINE L1 -454 7242 6774 6 1161 266 292 0 14 chrX 75570197 75570270 -91080026 + BC1_Mm scRNA scRNA 1 72 -80 7 1161 533 324 10 14 chrX 75571040 75571331 -91078965 + L1_Mur3 LINE L1 852 1141 -6571 7 1161 4726 50 18 8 chrX 75572278 75572882 -91077414 - L1Md_F2 LINE L1 -1 6581 5972 7 1161 2816 80 5 3 chrX 75573030 75573417 -91076879 + BGLII LTR ERVK 1 388 -33 7 1161 345 211 54 50 chrX 75573693 75573900 -91076396 + RMER17A-int LTR ERVK 1458 1691 -37 7 1161 291 378 83 60 chrX 75574022 75574287 -91076009 - ORR1D2 LTR MaLR -97 273 3 7 1161 260 79 0 0 chrX 75574370 75574408 -91075888 - B1_Mus2 SINE Alu -1 146 109 7 1161 208 114 44 22 chrX 75574523 75574568 -91075728 + (CATTA)n Simple_repeat Simple_repeat 1 46 0 7 1161 370 50 50 0 chrX 75574645 75574705 -91075591 + (CAAAAA)n Simple_repeat Simple_repeat 2 64 0 7 1161 340 320 113 28 chrX 75574797 75575222 -91075074 - L1_Mur3 LINE L1 -68 5812 5352 7 1161 882 223 57 20 chrX 75575771 75576069 -91074227 + L1_Mur3 LINE L1 876 1184 -6528 8 1161 190 56 27 27 chrX 75576071 75576108 -91074188 + (CAAAAA)n Simple_repeat Simple_repeat 3 39 0 8 1161 384 312 62 28 chrX 75576116 75576327 -91073969 + RMER15-int LTR ERVL 4181 4398 -601 8 1161 381 136 0 0 chrX 75576832 75576898 -91073398 + (GGGA)n Simple_repeat Simple_repeat 4 69 0 8 1161 318 106 0 0 chrX 75577215 75577262 -91073034 + (TCC)n Simple_repeat Simple_repeat 3 49 0 8 1161 531 31 0 0 chrX 75577638 75577703 -91072593 + (CA)n Simple_repeat Simple_repeat 2 66 0 8 1161 186 118 0 0 chrX 75577946 75577980 -91072316 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 8 1161 1676 125 100 13 chrX 75577996 75578296 -91072000 - IAPLTR4 LTR ERVK -19 326 1 8 1161 2285 55 118 3 chrX 75578289 75578620 -91071676 - IAPLTR2a LTR ERVK 0 411 43 8 1161 19875 44 0 0 chrX 75578621 75581224 -91069072 - L1Md_T LINE L1 -1476 4407 1805 8 1161 9607 21 0 0 chrX 75581222 75582386 -91067910 + L1Md_T LINE L1 4423 5586 -297 8 1161 8941 6 3 0 chrX 75582386 75583412 -91066884 + L1Md_T LINE L1 5587 6582 0 8 1161 333 0 0 0 chrX 75583440 75583477 -91066819 + (A)n Simple_repeat Simple_repeat 1 37 0 9 1161 472 18 0 0 chrX 75583477 75583534 -91066762 - IAPLTR2a LTR ERVK -354 57 1 8 1161 5945 62 20 4 chrX 75583536 75584349 -91065947 - IAPEz-int LTR ERVK -2 6479 5654 8 1161 10109 67 41 33 chrX 75584351 75585825 -91064471 - IAPEz-int LTR ERVK -4786 1695 211 8 1161 820 93 0 0 chrX 75585825 75585943 -91064353 - IAPEz-int LTR ERVK -6196 285 168 8 1161 263 283 0 0 chrX 75585943 75585996 -91064300 - RLTR27 LTR ERVK -34 275 223 9 1161 1056 142 34 65 chrX 75585996 75586275 -91064021 - IAPEz-int LTR ERVK -7329 252 9 8 1161 2946 50 76 3 chrX 75586276 75586659 -91063637 - IAPLTR2a LTR ERVK 0 411 1 8 1161 5717 240 43 35 chrX 75586660 75589183 -91061113 - IAPEz-int LTR ERVK -351 7329 3472 8 1161 745 102 17 8 chrX 75589322 75589441 -91060855 - MMERVK10C-int LTR ERVK -2932 4649 4530 9 1161 408 189 18 36 chrX 75589467 75589577 -91060719 - IAPEz-int LTR ERVK -2380 2464 2357 8 1161 6578 101 33 14 chrX 75589582 75590974 -91059322 - ETnERV3-int LTR ERVK -3135 4271 2735 9 1161 271 267 0 65 chrX 75590986 75591078 -91059218 - ETnERV3-int LTR ERVK -4867 2539 2454 9 1161 429 169 93 0 chrX 75591089 75591207 -91059089 - ETnERV3-int LTR ERVK -5557 1849 1721 9 1161 882 210 106 64 chrX 75591207 75591637 -91058659 - ETnERV3-int LTR ERVK -4784 622 323 9 1161 216 0 0 0 chrX 75591640 75591664 -91058632 + (TC)n Simple_repeat Simple_repeat 2 25 0 9 1161 342 0 0 0 chrX 75591664 75591702 -91058594 + (T)n Simple_repeat Simple_repeat 1 38 0 9 1161 330 144 0 111 chrX 75591876 75591973 -91058323 - MMERVK10C-int LTR ERVK -6629 952 869 9 1161 6470 92 14 6 chrX 75591973 75593151 -91057145 - IAPLTR4_I LTR ERVK 0 1470 168 9 1161 263 283 0 0 chrX 75593151 75593204 -91057092 - RLTR27 LTR ERVK -34 275 223 9 1161 1056 142 34 65 chrX 75593204 75593483 -91056813 - IAPLTR3-int LTR ERVK -7329 252 9 9 1161 2946 50 76 3 chrX 75593484 75593867 -91056429 - IAPLTR4_I LTR ERVK 0 411 1 9 1161 5717 240 43 35 chrX 75593868 75596391 -91053905 - IAPLTR3-int LTR ERVK -351 7329 3472 9 1161 745 102 17 8 chrX 75596530 75596649 -91053647 - MMERVK10C-int LTR ERVK -2932 4649 4530 9 1161 408 189 18 36 chrX 75596675 75596785 -91053511 - IAPLTR3-int LTR ERVK -2380 2464 2357 9 1161 6578 101 33 14 chrX 75596790 75598182 -91052114 - ETnERV3-int LTR ERVK -3135 4271 2735 1 1161 271 267 0 65 chrX 75598194 75598286 -91052010 - ETnERV3-int LTR ERVK -4867 2539 2454 1 1161 429 169 93 0 chrX 75598297 75598415 -91051881 - ETnERV3-int LTR ERVK -5557 1849 1721 1 1161 876 210 106 66 chrX 75598415 75598846 -91051450 - ETnERV3-int LTR ERVK -4784 622 323 1 1161 216 0 0 0 chrX 75598849 75598873 -91051423 + (TC)n Simple_repeat Simple_repeat 2 25 0 1 1161 315 0 0 0 chrX 75598873 75598908 -91051388 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1161 330 144 0 111 chrX 75599082 75599179 -91051117 - MMERVK10C-int LTR ERVK -6629 952 869 1 1161 11169 36 28 0 chrX 75599179 75600591 -91049705 - IAPLTR4_I LTR ERVK 0 1470 19 1 1161 1619 140 119 10 chrX 75600591 75600902 -91049394 - IAPLTR4 LTR ERVK 0 345 1 1 1161 192 40 0 0 chrX 75600902 75600927 -91049369 + (CAA)n Simple_repeat Simple_repeat 2 26 0 1 1161 435 19 0 0 chrX 75601144 75601196 -91049100 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 1161 231 359 0 61 chrX 75601348 75601446 -91048850 + MTEa LTR MaLR 58 149 -230 1 1161 347 254 132 42 chrX 75601966 75602110 -91048186 - RMER10B LTR ERVL 0 398 242 1 1161 414 53 0 0 chrX 75602516 75602573 -91047723 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1161 6887 89 1 9 chrX 75604095 75605185 -91045111 + L1_Mus2 LINE L1 5485 6566 0 1 1161 370 392 6 29 chrX 75605250 75605469 -91044827 - B3A SINE B2 -3 213 1 1 1161 23 54 0 0 chrX 75605705 75605742 -91044554 + AT_rich Low_complexity Low_complexity 1 37 0 1 1161 339 271 23 54 chrX 75607250 75607379 -91042917 - RLTR23 LTR ERV1 -4 426 302 1 1161 643 224 19 19 chrX 75607388 75607543 -91042753 + RLTR22_Mur LTR ERVK 327 481 -1367 1 1161 695 98 0 0 chrX 75609193 75609305 -91040991 - L1Md_F2 LINE L1 -12 6570 6459 1 1161 603 38 0 0 chrX 75609315 75609395 -91040901 + L1Md_T LINE L1 6491 6570 -12 1 1161 642 271 6 17 chrX 75609397 75609577 -91040719 - Lx6 LINE L1 -192 7268 7091 1 1161 2599 166 78 79 chrX 75609647 75610189 -91040107 + RLTR20A LTR ERVK 1 541 0 1 1161 2261 144 14 29 chrX 75610371 75610786 -91039510 + RLTR9E LTR ERVK 1 409 0 1 1161 360 0 0 0 chrX 75611138 75611178 -91039118 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1161 586 192 138 0 chrX 75612132 75612262 -91038034 - B1_Mus1 SINE Alu 0 148 1 1 1161 1863 153 45 0 chrX 75612262 75612570 -91037726 - ORR1A2 LTR MaLR -5 322 1 1 1161 257 0 0 29 chrX 75613397 75613431 -91036865 + (TAA)n Simple_repeat Simple_repeat 2 34 0 1 1161 330 292 31 0 chrX 75613521 75613617 -91036679 + B1F SINE Alu 30 128 -21 1 1161 442 337 41 49 chrX 75613699 75614272 -91036024 + L1M4 LINE L1 4372 4945 -1201 1 1161 508 319 39 21 chrX 75614543 75614825 -91035471 + L1M4 LINE L1 5259 5545 -634 1 1161 226 294 89 30 chrX 75616840 75617008 -91033288 - L1M3 LINE L1 -890 5250 5073 1 1161 980 251 58 54 chrX 75617269 75617669 -91032627 - RLTR26 LTR ERVK -170 472 5 1 1161 3447 154 36 7 chrX 75617683 75618231 -91032065 - MERVK26-int LTR ERVK -2 6917 6354 1 1161 481 142 23 19 chrX 75618233 75618355 -91031941 + B1_Mm SINE Alu 27 149 0 1 1161 3014 184 4 4 chrX 75618371 75618894 -91031402 - MERVK26-int LTR ERVK -628 6291 5769 1 1161 786 115 0 0 chrX 75618897 75619010 -91031286 + ORR1A1 LTR MaLR 234 346 0 1 1161 1906 159 3 0 chrX 75619010 75619299 -91030997 - MERVK26-int LTR ERVK -2312 4607 4318 1 1161 2837 60 10 33 chrX 75619299 75619696 -91030600 + RLTR10 LTR ERVK 1 388 -2 1 1161 4249 55 6 3 chrX 75619708 75620591 -91029705 + RLTR10-int LTR ERVK 41 998 -989 1 1161 8839 21 1 1 chrX 75620866 75621863 -91028433 + RLTR10-int LTR ERVK 990 1986 -1 1 1161 3136 57 10 33 chrX 75621863 75622260 -91028036 + RLTR10 LTR ERVK 1 388 -2 1 1161 2159 136 16 0 chrX 75622262 75622579 -91027717 - MERVK26-int LTR ERVK -2596 4323 4002 1 1161 3423 193 13 24 chrX 75622574 75622859 -91027437 - MERVK26-int LTR ERVK -3558 3361 3082 1 1161 1145 103 7 0 chrX 75622859 75623004 -91027292 - B1_Mus2 SINE Alu 0 147 2 1 1161 3423 193 13 24 chrX 75623004 75623391 -91026905 - MERVK26-int LTR ERVK -3838 3081 2696 1 1161 30172 86 2 58 chrX 75623398 75625283 -91025013 - L1Md_F2 LINE L1 -14 6568 4691 1 1161 2300 27 114 0 chrX 75625283 75625545 -91024751 + RLTR10B LTR ERVK 1 292 0 1 1161 30172 93 1 117 chrX 75625545 75626143 -91024153 - L1_Mm LINE L1 -1193 4690 4690 1 1161 2219 31 123 0 chrX 75626143 75626403 -91023893 + RLTR10B LTR ERVK 1 292 0 1 145 30172 101 13 95 chrX 75626403 75630747 -91019549 - L1Md_F2 LINE L1 -1193 4690 306 1 1162 7312 168 37 30 chrX 75630780 75632098 -91018198 - MERVK26-int LTR ERVK -4216 2703 1377 1 1162 385 176 68 19 chrX 75632808 75633019 -91017277 + (TA)n Simple_repeat Simple_repeat 1 221 0 1 1162 430 270 40 114 chrX 75633217 75633418 -91016878 + B3 SINE B2 1 186 -9 1 1162 6042 82 1 17 chrX 75633851 75634632 -91015664 - L1Md_F2 LINE L1 0 6582 5814 1 1162 4443 66 2 2 chrX 75634632 75635195 -91015101 + L1Md_F2 LINE L1 5253 5815 -68 1 1162 396 0 0 0 chrX 75637130 75637174 -91013122 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1162 321 252 124 41 chrX 75637575 75637720 -91012576 + RMER10B LTR ERVL 242 398 0 1 1162 846 52 0 0 chrX 75638479 75638595 -91011701 + (CA)n Simple_repeat Simple_repeat 2 117 0 1 1162 195 170 0 0 chrX 75638820 75638867 -91011429 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1 1162 15705 9 1 0 chrX 75638943 75640690 -91009606 + L1Md_A LINE L1 3839 5586 -297 1 1162 9265 22 0 0 chrX 75640690 75641686 -91008610 + L1Md_A LINE L1 5587 6582 0 1 1162 366 23 0 0 chrX 75641870 75641913 -91008383 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1162 2171 43 16 0 chrX 75642104 75642357 -91007939 - L1Md_F3 LINE L1 -15 6569 6313 1 1162 5565 39 9 0 chrX 75642357 75643026 -91007270 + L1Md_F3 LINE L1 5628 6302 -282 1 1162 1194 95 0 3 chrX 75643241 75643588 -91006708 + (GGA)n Simple_repeat Simple_repeat 1 345 0 1 1162 250 274 200 77 chrX 75643625 75643795 -91006501 + RMER10A LTR ERVL 12 202 -196 1 1162 238 245 19 0 chrX 75643867 75643920 -91006376 + CT-rich Low_complexity Low_complexity 4 57 0 1 1162 770 116 7 0 chrX 75643936 75644074 -91006222 + (TC)n Simple_repeat Simple_repeat 1 139 0 1 1162 427 183 75 28 chrX 75644224 75644331 -91005965 + RMER10A LTR ERVL 321 432 -10 1 1162 414 165 247 6 chrX 75645102 75645255 -91005041 + RMER17C LTR ERVK 206 395 -15 1 1162 2908 81 34 0 chrX 75645260 75645641 -91004655 - L1_Mus1 LINE L1 0 6567 6174 1 1162 3512 52 47 106 chrX 75645753 75646265 -91004031 - RLTR45 LTR ERVK 0 482 1 1 1162 420 171 0 0 chrX 75648076 75648158 -91002138 + (TATG)n Simple_repeat Simple_repeat 2 83 0 1 1162 742 254 62 5 chrX 75648165 75648409 -91001887 - L1MA4 LINE L1 -374 5926 5670 1 1162 4463 158 48 32 chrX 75648426 75649306 -91000990 + RLTR13D6 LTR ERVK 1 894 -8 1 1162 725 143 158 8 chrX 75649415 75649542 -91000754 - B1_Mur4 SINE Alu -3 147 2 1 1162 563 284 13 26 chrX 75650725 75650877 -90999419 - ID_B1 SINE B4 -25 199 50 1 1162 2034 73 11 19 chrX 75651207 75651620 -90998676 - L1_Mus1 LINE L1 0 6567 6300 1 1162 3221 85 19 114 chrX 75651903 75652436 -90997860 + RLTR45 LTR ERVK 1 482 0 1 1162 1631 144 26 106 chrX 75652946 75653296 -90997000 - RLTRETN_Mm LTR ERVK 0 322 1 1 1162 3548 78 45 4 chrX 75653349 75653812 -90996484 - RLTR45 LTR ERVK 0 482 1 1 1162 279 0 0 0 chrX 75654336 75654367 -90995929 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1162 32647 70 10 2 chrX 75656568 75661540 -90988756 - L1Md_F2 LINE L1 -4 6578 1565 1 1162 549 0 0 0 chrX 75662469 75662530 -90987766 + (GA)n Simple_repeat Simple_repeat 2 62 0 1 1162 1190 88 0 81 chrX 75664710 75664896 -90985400 + L1_Mus4 LINE L1 6457 6627 -9 1 1162 222 123 53 0 chrX 75664943 75665000 -90985296 + (TAAA)n Simple_repeat Simple_repeat 1 60 0 1 1162 2642 115 86 44 chrX 75665393 75665849 -90984447 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1162 2961 166 97 8 chrX 75666650 75667178 -90983118 - RMER15 LTR ERVL 0 575 1 1 1162 1711 86 43 4 chrX 75667284 75667541 -90982755 - L1_Mm LINE L1 -384 5499 5233 1 1162 3142 62 0 2 chrX 75667541 75667944 -90982352 + L1_Mus1 LINE L1 6166 6567 0 1 1162 2590 62 3 3 chrX 75668992 75669330 -90980966 + L1Md_T LINE L1 5248 5585 -298 1 1162 8250 43 0 1 chrX 75669331 75670328 -90979968 + L1Md_T LINE L1 5587 6582 0 1 1162 4740 71 1 1 chrX 75670822 75671683 -90978613 + L1Md_F2 LINE L1 5248 6108 -474 1 1162 758 179 119 0 chrX 75671683 75671834 -90978462 + RLTR9D LTR ERVK 235 403 0 1 1162 681 282 57 48 chrX 75671834 75672047 -90978249 + RMER2 LTR ERV1 351 565 -2 1 1162 373 329 37 37 chrX 75672068 75672232 -90978064 - MLT-int LTR MaLR -257 1478 1315 1 1162 242 226 111 16 chrX 75672652 75672715 -90977581 - MLT1A LTR MaLR -305 69 1 1 1162 356 278 98 0 chrX 75672768 75672901 -90977395 - MER5A1 DNA MER1_type -1 165 20 1 1162 233 276 63 54 chrX 75672940 75673051 -90977245 - MER5B DNA MER1_type -60 118 7 1 1162 4296 195 42 21 chrX 75673377 75674267 -90976029 - RMER13B LTR ERVK 0 908 1 1 1162 2277 206 50 66 chrX 75674295 75674913 -90975383 - RMER17A-int LTR ERVK -37 1691 1084 1 1162 743 186 26 186 chrX 75674961 75675272 -90975024 - RMER17A-int LTR ERVK -629 1099 839 1 1162 23338 11 0 0 chrX 75675448 75678126 -90972170 + L1Md_A LINE L1 2909 5586 -297 1 1162 8772 14 1 0 chrX 75678126 75679121 -90971175 + L1Md_A LINE L1 5587 6582 0 1 1162 1654 35 0 0 chrX 75679179 75679411 -90970885 + L1Md_F2 LINE L1 6373 6582 0 1 1162 374 239 54 116 chrX 75679490 75679637 -90970659 + RMER1B Other Other 288 425 -641 1 1162 459 0 0 0 chrX 75679640 75679691 -90970605 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1162 304 285 49 42 chrX 75679722 75679865 -90970431 - RLTR17 LTR ERVK -62 630 487 1 1162 225 0 0 0 chrX 75679999 75680024 -90970272 + (CCCCCA)n Simple_repeat Simple_repeat 5 29 0 1 1162 234 322 8 47 chrX 75680216 75680343 -90969953 - L1MEf LINE L1 -4724 1476 1355 1 1162 753 265 63 0 chrX 75680482 75680671 -90969625 - B3 SINE B2 -10 206 6 1 1162 320 347 74 5 chrX 75680981 75681198 -90969098 - HAL1 LINE L1 -1391 1116 885 1 1162 18040 83 20 11 chrX 75682186 75684009 -90966287 - L1VL4 LINE L1 -1 3558 1726 1 1162 213 65 0 0 chrX 75684009 75684040 -90966256 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1162 18040 93 22 6 chrX 75684040 75685536 -90964760 - L1VL4 LINE L1 -1834 1725 212 1 1162 266 0 0 0 chrX 75685537 75685567 -90964729 - MusHAL1 LINE L1 -3324 30 1 1 1162 356 276 66 41 chrX 75685953 75686074 -90964222 + PB1D10 SINE Alu 8 131 -18 1 1162 459 0 0 0 chrX 75686537 75686588 -90963708 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1162 528 16 0 0 chrX 75686588 75686648 -90963648 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 1162 198 0 0 0 chrX 75687007 75687029 -90963267 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1162 186 374 68 15 chrX 75688146 75688279 -90962017 - MIR SINE MIR -108 154 15 1 1162 24 0 0 0 chrX 75688442 75688466 -90961830 + AT_rich Low_complexity Low_complexity 1 24 0 1 1162 342 221 39 87 chrX 75688542 75688646 -90961650 - B3A SINE B2 -2 196 98 2 1162 2289 192 29 79 chrX 75688828 75688915 -90961381 + RLTR40 LTR ERVK 18 100 -717 2 1162 770 110 101 22 chrX 75688915 75689054 -90961242 + L1Md_F2 LINE L1 6433 6582 0 2 1162 2289 192 29 79 chrX 75689054 75689548 -90960748 + RLTR40 LTR ERVK 101 570 -247 2 1162 1274 202 51 17 chrX 75689555 75689847 -90960449 - MT2A LTR ERVL -231 302 1 2 1162 1885 117 80 3 chrX 75690101 75690402 -90959894 - Lx2 LINE L1 -6 6991 6668 2 1162 416 246 15 62 chrX 75690852 75690982 -90959314 + BC1_Mm scRNA scRNA 1 124 -28 2 1162 35 0 0 0 chrX 75692039 75692074 -90958222 + AT_rich Low_complexity Low_complexity 1 35 0 2 1162 6996 24 4 0 chrX 75693297 75694097 -90956199 + RLTR13B4 LTR ERVK 1 803 0 2 1162 26 30 0 0 chrX 75695228 75695261 -90955035 + AT_rich Low_complexity Low_complexity 1 33 0 2 1162 21 36 0 0 chrX 75695369 75695397 -90954899 + AT_rich Low_complexity Low_complexity 1 28 0 2 1162 503 214 140 39 chrX 75695942 75696199 -90954097 - Charlie1 DNA MER1_type -2 2779 2497 2 1162 382 311 57 0 chrX 75696199 75696321 -90953975 - Charlie1 DNA MER1_type -2651 130 2 2 1162 725 300 30 65 chrX 75698768 75699000 -90951296 - Tigger5 DNA MER2_type -2172 234 11 2 1162 365 227 27 0 chrX 75699175 75699250 -90951046 + B4A SINE B4 2 78 -214 2 1162 185 262 24 0 chrX 75699823 75699865 -90950431 + MIRc SINE MIR 113 155 -113 2 1162 477 225 101 7 chrX 75699880 75700019 -90950277 - Lx3C LINE L1 -2 6974 6823 2 1162 243 0 0 0 chrX 75700452 75700479 -90949817 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1162 539 333 20 0 chrX 75700817 75700970 -90949326 - RSINE1 SINE B4 -7 158 3 2 1162 319 269 15 0 chrX 75700994 75701061 -90949235 - ORR1E LTR MaLR -290 69 2 2 1162 25 75 0 0 chrX 75701327 75701380 -90948916 + AT_rich Low_complexity Low_complexity 1 53 0 2 1162 852 270 34 0 chrX 75701399 75701603 -90948693 + B3 SINE B2 1 211 -5 2 1162 697 289 19 19 chrX 75701636 75701851 -90948445 + B3 SINE B2 1 215 -1 2 1162 234 62 0 0 chrX 75701940 75701972 -90948324 + (GGA)n Simple_repeat Simple_repeat 2 33 0 2 1162 785 235 84 69 chrX 75702378 75702652 -90947644 - RMER13A LTR ERVK -581 279 2 2 1162 674 253 36 0 chrX 75702690 75702856 -90947440 - B3A SINE B2 -26 172 1 2 1162 1908 84 10 24 chrX 75703262 75703555 -90946741 - L1_Mus3 LINE L1 0 6638 6350 2 1162 748 335 3 112 chrX 75703555 75703875 -90946421 + MTEa LTR MaLR 94 378 -1 2 1162 1659 268 68 143 chrX 75703876 75704705 -90945591 + MTEa-int LTR MaLR 1 766 -814 2 1162 539 240 70 0 chrX 75704742 75704871 -90945425 + MTEa-int LTR MaLR 1418 1555 -25 2 1162 378 0 0 0 chrX 75704945 75704987 -90945309 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 1162 565 292 42 0 chrX 75705027 75705171 -90945125 - B3A SINE B2 -48 150 1 2 1162 1065 272 14 54 chrX 75705171 75705451 -90944845 + MTEa LTR MaLR 1 269 -110 2 1162 542 216 68 88 chrX 75705493 75705640 -90944656 - B1_Mus2 SINE Alu -3 144 1 2 1162 461 323 50 101 chrX 75705675 75705992 -90944304 + ORR1E LTR MaLR 59 359 0 2 1162 806 255 16 31 chrX 75706244 75706438 -90943858 + B3 SINE B2 9 199 -17 2 1162 2838 58 0 22 chrX 75706444 75706814 -90943482 + L1_Mus1 LINE L1 6206 6567 0 2 1162 26 50 0 0 chrX 75707039 75707079 -90943217 + AT_rich Low_complexity Low_complexity 1 40 0 2 1162 470 312 77 24 chrX 75707096 75707303 -90942993 - MER58A DNA MER1_type -6 218 1 2 1162 488 141 8 24 chrX 75707366 75707490 -90942806 + (TA)n Simple_repeat Simple_repeat 2 123 0 2 1162 356 269 88 20 chrX 75707692 75707840 -90942456 - MER5A1 DNA MER1_type -5 161 4 2 1162 510 162 279 0 chrX 75708045 75708156 -90942140 - B1_Mur4 SINE Alu -8 142 1 2 1162 271 303 16 99 chrX 75709076 75709197 -90941099 + MTEa LTR MaLR 255 365 -14 2 1162 782 273 14 47 chrX 75709300 75709515 -90940781 + B3 SINE B2 3 210 -6 2 1162 374 272 7 65 chrX 75709520 75709606 -90940690 + Lx8 LINE L1 5692 5802 -354 2 1162 7588 6 1 0 chrX 75709606 75710455 -90939841 + L1Md_A LINE L1 5732 6581 -1 2 1162 374 264 6 63 chrX 75710455 75710631 -90939665 + Lx8 LINE L1 5735 5963 -193 2 1162 23 33 0 0 chrX 75711048 75711078 -90939218 + AT_rich Low_complexity Low_complexity 1 30 0 2 1162 1499 198 70 29 chrX 75711094 75711290 -90939006 - ORR1D1 LTR MaLR 0 374 175 2 1162 464 0 18 0 chrX 75711290 75711346 -90938950 + (TG)n Simple_repeat Simple_repeat 1 57 0 2 1162 1499 198 70 29 chrX 75711346 75711493 -90938803 - ORR1D1 LTR MaLR -200 174 17 2 1162 209 345 80 18 chrX 75712010 75712122 -90938174 + L2 LINE L2 2600 2718 -701 2 1162 285 128 0 0 chrX 75713074 75713121 -90937175 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1162 27 0 0 0 chrX 75713411 75713438 -90936858 + AT_rich Low_complexity Low_complexity 1 27 0 2 1162 189 0 0 0 chrX 75713912 75713933 -90936363 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2 1162 22 0 0 0 chrX 75713933 75713955 -90936341 + AT_rich Low_complexity Low_complexity 1 22 0 2 1162 609 274 88 11 chrX 75713998 75714179 -90936117 - B3A SINE B2 -3 195 1 2 1162 277 333 109 82 chrX 75716341 75716488 -90933808 + RSINE1 SINE B4 2 152 -13 2 1162 25 31 0 0 chrX 75716521 75716553 -90933743 + AT_rich Low_complexity Low_complexity 1 32 0 2 1162 598 285 72 10 chrX 75716609 75716804 -90933492 - B3 SINE B2 -9 207 1 2 1162 271 302 61 20 chrX 75716846 75716944 -90933352 - B3 SINE B2 -14 202 101 2 1162 1903 46 4 0 chrX 75716961 75717198 -90933098 + L1Md_T LINE L1 6345 6582 0 2 1162 1283 106 5 0 chrX 75717214 75717402 -90932894 + B2_Mm1t SINE B2 2 190 -3 2 1162 895 162 0 0 chrX 75718283 75718419 -90931877 + B1_Mus1 SINE Alu 6 141 -7 2 1162 342 83 0 0 chrX 75718531 75718579 -90931717 - L1M5 LINE L1 -2828 3318 3271 2 1162 733 222 7 0 chrX 75718679 75718814 -90931482 - B1_Mur2 SINE Alu -13 136 1 2 1162 628 218 60 8 chrX 75719403 75719537 -90930759 + ORR1D2 LTR MaLR 1 141 -229 2 1162 375 265 33 100 chrX 75719538 75719718 -90930578 - L1MC3 LINE L1 -793 6992 6825 2 1162 233 250 75 54 chrX 75720084 75720177 -90930119 + B4A SINE B4 3 97 -195 2 1162 16850 85 28 8 chrX 75720178 75723474 -90926822 + L1VL4 LINE L1 194 3555 -4 2 1162 255 238 0 0 chrX 75723476 75723518 -90926778 + B4A SINE B4 82 123 -169 2 1162 2003 120 15 18 chrX 75723611 75723950 -90926346 - L1_Mus3 LINE L1 0 6638 6301 2 1162 6630 117 4 0 chrX 75723950 75724922 -90925374 + L1_Mm LINE L1 4889 5864 -19 2 1162 556 102 10 10 chrX 75724936 75725035 -90925261 + (CA)n Simple_repeat Simple_repeat 2 100 0 2 1162 182 417 7 29 chrX 75725149 75725285 -90925011 - MIRc SINE MIR -96 172 40 2 1162 1113 81 0 0 chrX 75725312 75725460 -90924836 + B1_Mus1 SINE Alu 1 148 0 2 1162 240 100 0 0 chrX 75725460 75725500 -90924796 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 2 1162 206 189 81 0 chrX 75726457 75726531 -90923765 - L2a LINE L2 -132 3294 3215 2 1162 568 308 8 8 chrX 75727019 75727150 -90923146 + RSINE1 SINE B4 4 134 -31 2 1162 482 320 77 49 chrX 75727363 75727712 -90922584 - ORR1E LTR MaLR 0 379 1 2 1162 252 254 0 17 chrX 75728655 75728715 -90921581 - ID4_ SINE ID -22 61 3 2 1162 22 0 0 0 chrX 75729251 75729273 -90921023 + AT_rich Low_complexity Low_complexity 1 22 0 2 1162 345 82 0 0 chrX 75729913 75729962 -90920334 + (GAAAA)n Simple_repeat Simple_repeat 1 49 0 2 1162 435 238 0 0 chrX 75730084 75730164 -90920132 + ID4 SINE ID 3 82 -1 2 1162 582 270 34 102 chrX 75730422 75730495 -90919801 + B3A SINE B2 4 65 -133 2 1162 1052 99 0 7 chrX 75730495 75730632 -90919664 + B1_Mus1 SINE Alu 2 138 -10 2 1162 186 43 0 0 chrX 75730632 75730655 -90919641 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2 1162 582 270 34 102 chrX 75730655 75730762 -90919534 + B3A SINE B2 66 168 -30 2 1162 498 57 0 0 chrX 75730772 75730842 -90919454 + (CA)n Simple_repeat Simple_repeat 2 71 0 2 1162 9119 116 9 37 chrX 75730870 75731204 -90919092 + Lx2 LINE L1 5464 5797 -86 2 1162 1107 96 0 0 chrX 75731204 75731350 -90918946 + B1_Mm SINE Alu 2 147 0 2 1162 9119 103 14 59 chrX 75731350 75732615 -90917681 + Lx2 LINE L1 5797 6997 0 2 1162 231 149 21 0 chrX 75732617 75732664 -90917632 + A-rich Low_complexity Low_complexity 2 49 0 2 1162 696 258 19 6 chrX 75732669 75732825 -90917471 + B3 SINE B2 2 159 -57 2 1162 854 184 6 0 chrX 75732830 75733009 -90917287 + (TA)n Simple_repeat Simple_repeat 1 180 0 2 1162 278 250 0 0 chrX 75733077 75733133 -90917163 + B3A SINE B2 14 69 -129 2 1162 825 239 150 3 chrX 75733223 75733277 -90917019 - Charlie5 DNA MER1_type -176 2448 2387 2 1162 270 0 0 0 chrX 75733277 75733307 -90916989 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1162 825 239 150 3 chrX 75733307 75733546 -90916750 - Charlie5 DNA MER1_type -238 2386 2112 2 1162 1125 109 10 56 chrX 75734372 75734531 -90915765 + B2_Mm2 SINE B2 2 161 -34 2 1162 224 0 65 0 chrX 75734531 75734562 -90915734 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 2 1162 1125 109 10 56 chrX 75734562 75734597 -90915699 + B2_Mm2 SINE B2 162 187 -8 2 1162 300 267 116 0 chrX 75734641 75734727 -90915569 + RSINE1 SINE B4 2 97 -68 2 1162 1435 191 114 13 chrX 75734791 75735168 -90915128 - Lx7 LINE L1 -183 7513 7099 2 1162 186 71 0 0 chrX 75735922 75735950 -90914346 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 2 1162 539 211 19 9 chrX 75736832 75736937 -90913359 + PB1D9 SINE Alu 14 119 -1 2 1162 396 0 0 0 chrX 75736984 75737028 -90913268 + (TA)n Simple_repeat Simple_repeat 1 44 0 2 1162 198 0 0 0 chrX 75737162 75737184 -90913112 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 1162 420 86 57 0 chrX 75737184 75737254 -90913042 - B1_Mur3 SINE Alu -9 140 67 2 1162 636 142 117 0 chrX 75737751 75737871 -90912425 - URR1B DNA MER1_type 0 225 92 2 1162 240 208 0 19 chrX 75739075 75739129 -90911167 + Tigger15a DNA TcMar 297 349 -366 2 1162 957 55 0 0 chrX 75739309 75739437 -90910859 - L1Md_A LINE L1 -36 6546 6419 2 1162 239 303 0 73 chrX 75739437 75739462 -90910834 - BC1_Mm scRNA scRNA -52 100 76 3 1162 407 34 17 0 chrX 75739462 75739521 -90910775 + L1Md_T LINE L1 6522 6581 -1 3 1162 239 303 0 73 chrX 75739521 75739591 -90910705 - BC1_Mm scRNA scRNA -77 75 12 3 1162 208 346 42 70 chrX 75740075 75740218 -90910078 + MIR3 SINE MIR 34 172 -36 3 1162 24 0 0 0 chrX 75740407 75740431 -90909865 + AT_rich Low_complexity Low_complexity 1 24 0 3 1162 782 188 0 28 chrX 75740449 75740591 -90909705 + B1_Mus2 SINE Alu 1 138 -9 3 1162 27 49 0 0 chrX 75740776 75740817 -90909479 + AT_rich Low_complexity Low_complexity 1 41 0 3 1162 1409 105 178 74 chrX 75741861 75742159 -90908137 - ORR1A4 LTR MaLR 0 329 1 3 1162 705 257 29 0 chrX 75742465 75742605 -90907691 - B3 SINE B2 -70 146 3 3 1162 255 324 128 12 chrX 75742604 75742776 -90907520 + LTR82B Low_complexity ERVL 618 809 -21 3 1162 218 333 14 0 chrX 75743298 75743370 -90906926 + PB1D9 SINE Alu 39 111 -9 3 1162 436 246 6 23 chrX 75743400 75743531 -90906765 + L1MC LINE L1 5264 5392 -941 3 1162 1178 182 23 0 chrX 75743531 75743751 -90906545 - URR1B DNA MER1_type 0 225 1 3 1162 436 246 6 23 chrX 75743751 75743794 -90906502 + L1MC LINE L1 5393 5434 -899 3 1162 612 337 35 8 chrX 75743795 75744049 -90906247 + L1MB5 LINE L1 5912 6172 -2 3 1162 468 369 113 15 chrX 75744119 75744710 -90905586 + Lx8 LINE L1 6823 7471 -2 3 1162 32576 99 14 5 chrX 75744759 75749047 -90901249 + L1Md_F2 LINE L1 380 4725 -1158 3 1162 3027 71 13 0 chrX 75749047 75749427 -90900869 + IAPEY_LTR LTR ERVK 1 385 0 3 1162 32576 81 6 3 chrX 75749427 75750835 -90899461 + L1Md_F2 LINE L1 4726 6125 -457 3 1162 417 289 85 15 chrX 75751909 75752039 -90898257 - ID_B1 SINE B4 -2 222 84 3 1162 5445 86 16 12 chrX 75753194 75753995 -90896301 + RLTR22_Mur LTR ERVK 2 805 -1043 3 1162 399 323 72 38 chrX 75754204 75754439 -90895857 + RMER12 LTR ERVK 1080 1322 0 3 1162 2645 95 0 25 chrX 75754846 75755214 -90895082 - RLTR10D LTR ERVK 0 359 1 3 145 47399 69 9 12 chrX 75755214 75759931 -90890365 - IAP-d-int LTR ERVK 0 6542 1860 3 1163 1891 113 9 59 chrX 75759931 75760270 -90890026 + RLTRETN_Mm LTR ERVK 1 322 0 3 1163 47399 69 9 12 chrX 75760270 75761742 -90888554 - IAP-d-int LTR ERVK -4683 1859 370 3 1163 3430 184 75 34 chrX 75761742 75762566 -90887730 + RLTR13B1 LTR ERVK 1 1070 -44 3 1163 2073 68 93 0 chrX 75762566 75762844 -90887452 - IAP-d-int LTR ERVK -6238 304 1 3 1163 2520 89 28 17 chrX 75762844 75763199 -90887097 - RLTR10D LTR ERVK 0 359 1 3 1163 680 311 92 0 chrX 75763227 75763423 -90886873 - ID_B1 SINE B4 0 224 11 3 1163 23 33 0 0 chrX 75763532 75763562 -90886734 + AT_rich Low_complexity Low_complexity 1 30 0 3 1163 195 330 138 32 chrX 75764564 75764752 -90885544 - MIRc SINE MIR -30 238 31 3 1163 583 305 35 40 chrX 75765062 75765260 -90885036 - B3 SINE B2 -6 210 14 3 1163 291 28 0 0 chrX 75765382 75765418 -90884878 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1163 2073 161 54 25 chrX 75765511 75765918 -90884378 + Lx2B LINE L1 6578 6996 -4 3 1163 225 225 211 26 chrX 75766146 75766260 -90884036 - RLTR13D3 LTR ERVK -217 897 763 3 1163 252 0 0 0 chrX 75766951 75766979 -90883317 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1163 30 0 0 0 chrX 75767172 75767202 -90883094 + AT_rich Low_complexity Low_complexity 1 30 0 3 1163 750 269 32 0 chrX 75767372 75767558 -90882738 + B3A SINE B2 2 193 -5 3 1163 235 139 0 0 chrX 75767643 75767679 -90882617 - U2 snRNA snRNA -152 36 1 3 1163 201 74 0 0 chrX 75768403 75768430 -90881866 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1163 666 166 205 18 chrX 75768929 75769095 -90881201 + Lx4B LINE L1 6797 6993 -65 3 1163 23 0 0 0 chrX 75769112 75769135 -90881161 + AT_rich Low_complexity Low_complexity 1 23 0 3 1163 33 43 0 0 chrX 75769168 75769215 -90881081 + AT_rich Low_complexity Low_complexity 1 47 0 3 1163 21 71 0 0 chrX 75769237 75769279 -90881017 + AT_rich Low_complexity Low_complexity 1 42 0 3 1163 540 216 112 0 chrX 75769547 75769672 -90880624 + B1F1 SINE Alu 2 140 -9 3 1163 1100 162 108 0 chrX 75769744 75769948 -90880348 + URR1A DNA MER1_type 1 226 0 3 1163 530 308 34 20 chrX 75769993 75770139 -90880157 + B1_Mur2 SINE Alu 1 148 -1 3 1163 7590 65 20 29 chrX 75770221 75771279 -90879017 + L1_Mus3 LINE L1 5588 6635 -3 3 1163 1317 48 522 4 chrX 75771642 75771870 -90878426 - ORR1A0 LTR MaLR 0 346 1 3 1163 8440 42 0 3 chrX 75771870 75772937 -90877359 - ORR1A0-int LTR MaLR 0 1792 729 3 1163 3878 34 20 2 chrX 75772929 75773428 -90876868 - ORR1A0-int LTR MaLR -1283 509 2 3 1163 3782 36 0 0 chrX 75773428 75773871 -90876425 + MERVL-int LTR ERVL 4032 4474 -1011 3 1163 9277 46 17 26 chrX 75773856 75775052 -90875244 - MERVL-int LTR ERVL -4300 1185 1 3 1163 2948 35 0 0 chrX 75775052 75775398 -90874898 - ORR1A0 LTR MaLR 0 346 1 3 1163 666 222 182 0 chrX 75775426 75775602 -90874694 - B3 SINE B2 -4 212 5 3 1163 351 0 0 0 chrX 75775809 75775848 -90874448 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1163 238 99 88 0 chrX 75776175 75776266 -90874030 + (TA)n Simple_repeat Simple_repeat 2 100 0 3 1163 659 279 120 10 chrX 75777540 75777732 -90872564 + B3 SINE B2 2 214 -2 3 1163 195 285 119 46 chrX 75777932 75778083 -90872213 + MIR SINE MIR 60 221 -41 3 1163 296 280 80 0 chrX 75778802 75778902 -90871394 - PB1D9 SINE Alu -10 110 3 3 1163 398 202 84 11 chrX 75779505 75779600 -90870696 + MTEb LTR MaLR 278 379 0 3 1163 767 274 60 0 chrX 75779704 75779905 -90870391 + ID_B1 SINE B4 3 215 -9 3 1163 270 292 7 116 chrX 75780767 75780914 -90869382 - L2a LINE L2 -53 3373 3243 3 1163 402 302 0 0 chrX 75781342 75781438 -90868858 + RSINE1 SINE B4 1 96 -69 3 1163 2503 122 94 7 chrX 75781442 75781880 -90868416 + L1_Mur2 LINE L1 4098 4573 -1304 3 1163 342 0 0 0 chrX 75781914 75781952 -90868344 + (TATG)n Simple_repeat Simple_repeat 2 39 0 3 1163 224 281 108 12 chrX 75781997 75782080 -90868216 + PB1D10 SINE Alu 21 111 -6 3 1163 206 81 27 0 chrX 75782368 75782405 -90867891 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 1163 678 327 5 5 chrX 75782418 75782615 -90867681 + Tigger5 DNA MER2_type 1 197 -2209 3 1163 339 211 74 53 chrX 75782633 75782728 -90867568 + Tigger5 DNA MER2_type 2296 2392 -14 3 1163 556 298 74 39 chrX 75782804 75783038 -90867258 + MLT1F1 LTR MaLR 312 552 -8 3 1163 641 274 85 6 chrX 75783270 75783446 -90866850 + B3 SINE B2 17 206 -10 3 1163 1132 100 0 22 chrX 75783515 75783699 -90866597 + (TTTTC)n Simple_repeat Simple_repeat 1 180 0 3 1163 182 174 0 21 chrX 75783699 75783746 -90866550 + T-rich Low_complexity Low_complexity 5 50 0 3 1163 1253 232 93 13 chrX 75783852 75784153 -90866143 + Lx6 LINE L1 7058 7382 -78 3 1163 360 324 34 129 chrX 75784995 75785181 -90865115 - L1ME3A LINE L1 -72 6101 5939 3 1163 362 254 42 84 chrX 75785181 75785323 -90864973 - B1F1 SINE Alu -13 136 1 3 1163 360 324 34 129 chrX 75785323 75785462 -90864834 - L1ME3A LINE L1 -235 5938 5807 3 1163 308 264 256 52 chrX 75785545 75785853 -90864443 - L1ME3A LINE L1 -506 5667 5297 3 1163 527 293 18 54 chrX 75785907 75786073 -90864223 - RSINE1 SINE B4 -2 163 4 3 1163 488 244 97 8 chrX 75786081 75786205 -90864091 - B1F SINE Alu -2 147 13 3 1163 555 265 53 26 chrX 75786314 75786465 -90863831 + RSINE1 SINE B4 3 157 -8 3 1163 21 0 0 0 chrX 75786481 75786502 -90863794 + AT_rich Low_complexity Low_complexity 1 21 0 3 1163 877 233 14 41 chrX 75787627 75787846 -90862450 + B3 SINE B2 1 213 -3 3 1163 288 304 13 0 chrX 75787980 75788059 -90862237 + ID4_ SINE ID 2 81 -2 3 1163 244 105 53 0 chrX 75788342 75788399 -90861897 + A-rich Low_complexity Low_complexity 1 60 0 3 1163 951 233 29 10 chrX 75788926 75789130 -90861166 + B3 SINE B2 2 209 -7 3 1163 526 243 46 9 chrX 75789180 75789288 -90861008 + B1_Mur1 SINE Alu 3 114 -35 3 1163 219 139 0 0 chrX 75789320 75789356 -90860940 + (CAG)n Simple_repeat Simple_repeat 3 38 0 3 1163 270 0 0 0 chrX 75790298 75790328 -90859968 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1163 575 234 18 0 chrX 75791145 75791256 -90859040 + PB1D9 SINE Alu 1 113 -7 3 1163 554 240 16 0 chrX 75792116 75792237 -90858059 + ORR1C2 LTR MaLR 251 373 -11 3 1163 210 136 0 0 chrX 75792727 75792771 -90857525 + (T)n Simple_repeat Simple_repeat 1 44 0 3 1163 875 141 0 53 chrX 75793620 75793770 -90856526 - B1_Mus1 SINE Alu -2 146 5 3 1163 474 312 7 0 chrX 75794894 75795038 -90855258 + B1F1 SINE Alu 3 147 -2 3 1163 207 0 0 0 chrX 75796669 75796692 -90853604 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1163 1899 158 68 27 chrX 75796817 75797182 -90853114 + RLTR14 LTR ERV1 3 382 0 3 1163 234 146 36 0 chrX 75797331 75797386 -90852910 + (CAAA)n Simple_repeat Simple_repeat 2 58 0 3 1163 1212 209 91 12 chrX 75797510 75797762 -90852534 + RLTR14-int LTR ERV1 675 946 -4371 3 1163 358 226 86 0 chrX 75797803 75797896 -90852400 + RLTR14-int LTR ERV1 931 1031 -4286 3 1163 3864 186 69 27 chrX 75797871 75798655 -90851641 + RLTR14-int LTR ERV1 2027 2843 -2474 3 1163 2097 138 3 3 chrX 75798662 75798981 -90851315 - ORR1A2 LTR MaLR -8 319 1 3 1163 1692 155 3 24 chrX 75798981 75799007 -90851289 + RLTR14-int LTR ERV1 2847 2869 -2448 3 1163 1985 130 20 58 chrX 75799007 75799349 -90850947 - ORR1A4 LTR MaLR 0 329 1 3 1163 1692 155 3 24 chrX 75799349 75799613 -90850683 + RLTR14-int LTR ERV1 2870 3131 -2186 3 1163 351 0 0 0 chrX 75799613 75799652 -90850644 + (A)n Simple_repeat Simple_repeat 1 39 0 3 1163 6696 175 23 21 chrX 75799652 75800843 -90849453 + RLTR14-int LTR ERV1 3128 4320 -997 3 1163 4198 127 134 53 chrX 75800863 75801706 -90848590 + RLTR14-int LTR ERV1 4407 5317 0 3 1163 2223 168 3 21 chrX 75801725 75802108 -90848188 + RLTR14 LTR ERV1 7 382 0 3 1163 364 247 0 64 chrX 75802173 75802251 -90848045 + ID SINE ID 1 73 -151 3 1163 468 0 0 0 chrX 75802287 75802339 -90847957 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 1163 198 0 0 0 chrX 75802492 75802514 -90847782 + (TG)n Simple_repeat Simple_repeat 2 23 0 3 1163 24 0 0 0 chrX 75803531 75803555 -90846741 + AT_rich Low_complexity Low_complexity 1 24 0 3 1163 340 321 102 75 chrX 75804749 75805123 -90845173 + L1MEa LINE L1 72 455 -5681 3 1163 252 0 0 0 chrX 75805351 75805379 -90844917 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 1163 246 81 0 0 chrX 75805594 75805631 -90844665 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 3 1163 180 77 0 0 chrX 75805656 75805682 -90844614 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 1163 339 305 76 35 chrX 75805702 75805899 -90844397 + L1MEa LINE L1 2828 3032 -3114 3 1163 1705 187 66 9 chrX 75805925 75806275 -90844021 - ORR1D1 LTR MaLR -4 370 1 3 1163 897 170 0 0 chrX 75807120 75807267 -90843029 + B1_Mus1 SINE Alu 2 148 0 3 1163 424 279 22 65 chrX 75808942 75809080 -90841216 + RSINE1 SINE B4 2 133 -32 4 1163 549 243 43 7 chrX 75809671 75809812 -90840484 + B1_Mus2 SINE Alu 1 146 -1 4 1163 276 30 0 0 chrX 75810160 75810193 -90840103 + (TTTC)n Simple_repeat Simple_repeat 2 34 0 4 1163 225 0 0 0 chrX 75810317 75810342 -90839954 + (TAAAAA)n Simple_repeat Simple_repeat 2 26 0 4 1163 698 265 26 42 chrX 75810406 75810599 -90839697 - RMER13B LTR ERVK 0 908 719 4 1163 13245 68 2 2 chrX 75810628 75812372 -90837924 + L1Md_F2 LINE L1 3842 5585 -298 4 1163 7627 58 11 6 chrX 75812373 75813358 -90836938 + L1Md_F2 LINE L1 5587 6576 -6 4 1163 1144 43 0 7 chrX 75813935 75814077 -90836219 + B1_Mm SINE Alu 1 141 -6 4 1163 207 0 0 0 chrX 75814079 75814102 -90836194 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1163 1688 125 99 39 chrX 75814713 75815150 -90835146 + RMER17C LTR ERVK 16 441 -517 4 1163 826 255 32 64 chrX 75815368 75815586 -90834710 - B3 SINE B2 -3 213 3 4 1163 1146 322 95 84 chrX 75815627 75816247 -90834049 - MTE-int LTR MaLR -237 1343 717 4 1163 711 284 44 10 chrX 75816254 75816460 -90833836 + MTEa LTR MaLR 4 216 -163 4 1163 967 257 5 14 chrX 75816470 75816679 -90833617 - B3 SINE B2 -2 214 8 4 1163 243 171 0 0 chrX 75816689 75816724 -90833572 + MTEa LTR MaLR 180 214 -145 4 1163 300 226 158 42 chrX 75816836 75816956 -90833340 + L1MEg LINE L1 1818 1951 -4133 4 1163 663 242 0 26 chrX 75816958 75817111 -90833185 + B1_Mur3 SINE Alu 1 149 0 4 1163 23 0 0 0 chrX 75817407 75817430 -90832866 + AT_rich Low_complexity Low_complexity 1 23 0 4 1163 759 176 7 5 chrX 75817834 75817999 -90832297 + Lx5 LINE L1 6314 6479 -579 4 1163 1746 204 35 29 chrX 75818112 75818460 -90831836 - Lx5 LINE L1 -132 6918 6569 4 1163 626 186 197 20 chrX 75818628 75818826 -90831470 + RMER1C Other Other 12 244 -1098 4 1163 330 216 0 0 chrX 75818827 75818901 -90831395 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 4 1163 3071 248 62 29 chrX 75819203 75819997 -90830299 + RMER1C Other Other 523 1342 0 4 1163 330 222 63 0 chrX 75820110 75820173 -90830123 - B3A SINE B2 -131 67 1 4 1163 201 245 0 0 chrX 75820367 75820420 -90829876 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1163 1044 326 83 32 chrX 75820519 75821013 -90829283 - MTE-int LTR MaLR -998 582 64 4 1163 676 239 45 64 chrX 75821078 75821408 -90828888 + L1MC LINE L1 4416 4739 -1407 4 1163 1282 236 60 24 chrX 75821408 75821743 -90828553 - MTEb LTR MaLR 0 379 33 4 1163 398 305 39 0 chrX 75821804 75822007 -90828289 + L1MC LINE L1 4735 4945 -1201 4 1163 342 276 35 87 chrX 75822033 75822148 -90828148 + PB1D9 SINE Alu 11 119 -1 4 1163 211 318 0 0 chrX 75822180 75822224 -90828072 + ID4 SINE ID 20 63 -20 4 1163 518 261 140 14 chrX 75822290 75822714 -90827582 + L1MC LINE L1 4985 5479 -710 4 1163 894 70 132 0 chrX 75822714 75822843 -90827453 + B1_Mm SINE Alu 2 147 0 4 1163 233 274 70 47 chrX 75822843 75822859 -90827437 + L1MC LINE L1 5480 5495 -694 4 1163 1297 33 0 0 chrX 75822926 75823078 -90827218 - L1Md_T LINE L1 -276 6306 6155 4 1163 2268 39 0 7 chrX 75823078 75823360 -90826936 + L1Md_T LINE L1 6303 6582 0 4 1163 1304 298 103 21 chrX 75823402 75823967 -90826329 + L1MC1 LINE L1 5580 6190 -143 4 1163 1131 55 7 0 chrX 75824019 75824165 -90826131 + B1_Mus1 SINE Alu 2 148 0 4 1163 234 196 0 0 chrX 75824167 75824213 -90826083 + A-rich Low_complexity Low_complexity 1 46 0 4 1163 2000 133 99 16 chrX 75824764 75825138 -90825158 - MTB_Mm LTR MaLR 0 407 3 4 1163 4168 56 16 30 chrX 75827015 75827588 -90822708 - L1Md_F2 LINE L1 -4 6578 6014 4 1163 489 47 0 0 chrX 75828081 75828145 -90822151 + (TC)n Simple_repeat Simple_repeat 1 64 0 4 1163 396 0 0 0 chrX 75828145 75828188 -90822108 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1163 233 254 0 43 chrX 75828386 75828431 -90821865 + (CG)n Simple_repeat Simple_repeat 1 43 0 4 1163 432 0 0 0 chrX 75828431 75828479 -90821817 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 1163 233 254 0 43 chrX 75828479 75828503 -90821793 + (CG)n Simple_repeat Simple_repeat 2 25 0 4 1163 225 316 0 0 chrX 75829265 75829341 -90820955 + G-rich Low_complexity Low_complexity 3 78 0 4 1163 435 275 21 14 chrX 75829586 75829730 -90820566 - B1F1 SINE Alu 0 149 5 4 1163 531 0 0 0 chrX 75830137 75830196 -90820100 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 4 1163 324 51 33 17 chrX 75830291 75830351 -90819945 + (TTTTTG)n Simple_repeat Simple_repeat 6 66 0 4 1163 935 157 14 0 chrX 75830355 75830502 -90819794 - B1_Mur4 SINE Alu 0 150 2 4 1163 939 225 35 5 chrX 75831442 75831643 -90818653 - B3 SINE B2 -9 207 1 4 1163 762 279 25 0 chrX 75831708 75831912 -90818384 + B3 SINE B2 2 210 -6 4 1163 218 191 31 16 chrX 75831989 75832053 -90818243 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 4 1163 531 311 26 63 chrX 75832112 75832301 -90817995 + B3A SINE B2 1 182 -16 4 1163 22 0 0 0 chrX 75832302 75832324 -90817972 + AT_rich Low_complexity Low_complexity 1 22 0 4 1163 192 385 16 24 chrX 75832970 75833095 -90817201 + L2 LINE L2 2720 2843 -576 4 1163 646 301 52 0 chrX 75833099 75833292 -90817004 - Lx8 LINE L1 -492 6981 6779 4 1163 264 333 58 7 chrX 75833295 75833434 -90816862 + Lx8 LINE L1 6976 7121 -352 4 1163 384 239 0 0 chrX 75833446 75833513 -90816783 + PB1D9 SINE Alu 41 107 -13 4 1163 228 86 0 0 chrX 75833618 75833653 -90816643 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1163 1318 161 183 50 chrX 75833968 75834307 -90815989 - ORR1C2 LTR MaLR 0 384 1 4 1163 1683 165 67 88 chrX 75834358 75834790 -90815506 + RMER10A LTR ERVL 18 440 -2 4 1163 913 236 81 141 chrX 75836608 75837126 -90813170 + RLTR19-int LTR ERVK 2535 3021 -3116 4 1163 777 208 4 136 chrX 75837310 75837583 -90812713 + RLTR19-int LTR ERVK 3492 3728 -2409 4 1163 1752 182 71 60 chrX 75837958 75838395 -90811901 + RMER10A LTR ERVL 1 442 0 4 1163 853 267 142 4 chrX 75838474 75838700 -90811596 - ORR1D2 LTR MaLR -3 367 111 4 1163 688 254 118 10 chrX 75838701 75838896 -90811400 - B3 SINE B2 0 216 1 4 1163 311 304 62 17 chrX 75839011 75839188 -90811108 + L1M5 LINE L1 4942 5126 -1020 4 1163 198 91 0 0 chrX 75841043 75841076 -90809220 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 1163 357 24 0 0 chrX 75841160 75841202 -90809094 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1163 450 53 0 0 chrX 75841203 75841260 -90809036 + (TA)n Simple_repeat Simple_repeat 1 57 0 4 1163 855 228 38 19 chrX 75841446 75841656 -90808640 + B3 SINE B2 1 214 -2 4 1163 488 236 0 19 chrX 75841673 75841781 -90808515 - RMER5 LTR ERV1 -30 504 399 4 1163 978 152 126 10 chrX 75841924 75842123 -90808173 - Lx3B LINE L1 -376 6597 6376 4 1163 2432 103 10 10 chrX 75842104 75842287 -90808009 - L1_Mur1 LINE L1 -433 5453 5270 4 1163 269 26 26 0 chrX 75842287 75842325 -90807971 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 4 1163 2432 103 10 10 chrX 75842325 75842525 -90807771 - L1_Mur1 LINE L1 -617 5269 5070 4 1163 1836 155 44 74 chrX 75843470 75843833 -90806463 + ORR1B1 LTR MaLR 41 392 -2 4 1163 413 367 56 37 chrX 75843887 75844156 -90806140 + B4 SINE B4 2 275 -17 4 1163 246 229 0 0 chrX 75844160 75844230 -90806066 + (CCA)n Simple_repeat Simple_repeat 3 72 0 4 1163 21 36 0 0 chrX 75844230 75844258 -90806038 + AT_rich Low_complexity Low_complexity 1 28 0 4 1163 227 192 135 0 chrX 75844660 75844712 -90805584 + ID4_ SINE ID 5 63 -20 4 1163 1159 222 8 26 chrX 75845268 75845532 -90804764 + RCHARR1 DNA MER1_type 475 733 -241 4 1163 321 282 136 0 chrX 75845551 75845661 -90804635 - MTD LTR MaLR -13 406 282 4 1163 593 175 0 10 chrX 75845665 75845769 -90804527 + MTD LTR MaLR 5 107 -314 4 1163 9526 135 12 23 chrX 75845785 75847907 -90802389 + L1_Mus1 LINE L1 667 2714 -3169 4 1163 870 115 0 0 chrX 75847907 75848037 -90802259 + B1_Mm SINE Alu 18 147 0 4 1163 531 92 0 0 chrX 75848067 75848143 -90802153 + MusHAL1 LINE L1 1504 1579 -1133 4 1163 9575 93 20 29 chrX 75848142 75850274 -90800022 + L1_Mus1 LINE L1 4432 6565 -2 4 1163 1757 183 19 6 chrX 75850291 75850615 -90799681 + MTD LTR MaLR 84 411 -8 4 1163 1648 177 77 29 chrX 75850756 75851105 -90799191 - ORR1B2 LTR MaLR -1 366 1 4 1163 225 0 0 0 chrX 75851180 75851205 -90799091 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1163 693 171 43 14 chrX 75851238 75851407 -90798889 + B2_Mm2 SINE B2 5 183 -15 4 1163 697 151 52 35 chrX 75851407 75851579 -90798717 + Lx3C LINE L1 5945 6119 -857 4 1163 30949 75 5 1 chrX 75851576 75852300 -90797996 - L1Md_A LINE L1 -412 5471 4739 4 1163 247 25 24 24 chrX 75852300 75852341 -90797955 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 4 1163 30949 92 10 6 chrX 75852341 75856589 -90793707 - L1Md_A LINE L1 -1145 4738 479 4 1163 4486 155 5 5 chrX 75856587 75857345 -90792951 - L1Md_F LINE L1 -5661 858 101 4 1163 2141 192 34 10 chrX 75857632 75858043 -90792253 - MTC LTR MaLR 0 421 1 4 1163 558 0 0 0 chrX 75858059 75858121 -90792175 + (TTC)n Simple_repeat Simple_repeat 3 64 0 4 1163 680 114 16 0 chrX 75858177 75858300 -90791996 - L1_Mus3 LINE L1 -2 6636 6512 4 1163 1723 201 140 6 chrX 75858301 75858840 -90791456 - MTC-int LTR MaLR -524 734 1 4 1163 390 143 0 31 chrX 75858840 75858925 -90791371 - MTC LTR MaLR 0 421 338 4 1163 226 150 0 48 chrX 75858915 75858957 -90791339 - MTC LTR MaLR -381 40 1 4 1163 685 223 29 0 chrX 75859838 75859977 -90790319 - B1_Mur2 SINE Alu -5 144 2 4 1163 289 198 37 9 chrX 75861322 75861429 -90788867 + CT-rich Low_complexity Low_complexity 1 110 0 4 1163 412 375 33 19 chrX 75861429 75861641 -90788655 - MER68 LTR ERVL -185 378 164 4 1163 489 297 93 7 chrX 75861643 75861782 -90788514 + RSINE1 SINE B4 4 154 -11 4 1163 225 312 52 0 chrX 75861835 75861912 -90788384 - MER68 LTR ERVL -391 172 92 4 1163 686 238 301 38 chrX 75862021 75862394 -90787902 - Lx9 LINE L1 -1 7643 7173 4 1163 553 277 43 14 chrX 75862691 75862900 -90787396 - L1_Rod LINE L1 -3853 1994 1780 4 1163 15235 131 112 38 chrX 75862901 75864529 -90785767 + L1VL1 LINE L1 411 1963 -3920 4 1163 894 145 21 0 chrX 75864529 75864674 -90785622 + B1_Mus1 SINE Alu 1 148 0 4 1163 15235 116 227 29 chrX 75864674 75866968 -90783328 + L1VL1 LINE L1 1964 4902 -981 4 1163 779 229 13 107 chrX 75866965 75867190 -90783106 - L1VL1 LINE L1 -5998 424 221 4 1163 717 338 106 9 chrX 75867308 75867628 -90782668 - Lx8 LINE L1 -1 7472 7122 4 1163 1292 294 57 5 chrX 75867624 75868028 -90782268 - Lx8 LINE L1 -655 6818 6394 4 1163 1353 195 47 7 chrX 75868081 75868355 -90781941 - RMER15 LTR ERVL 0 575 291 5 1163 541 177 10 10 chrX 75868351 75868448 -90781848 - RMER15 LTR ERVL -478 97 1 5 1163 789 103 15 0 chrX 75868454 75868590 -90781706 - L1_Mus4 LINE L1 -5 6631 6494 5 1163 1027 90 14 7 chrX 75868590 75868730 -90781566 + L1_Mus4 LINE L1 6346 6487 -149 5 1163 372 289 0 30 chrX 75869059 75869159 -90781137 + MLT1I LTR MaLR 54 150 -261 5 1163 2540 175 11 45 chrX 75869360 75869898 -90780398 + RLTR28 LTR ERVL 1 520 -4 5 1163 345 223 38 19 chrX 75870934 75871039 -90779257 + L1MA8 LINE L1 6156 6262 -29 5 1163 21 57 0 0 chrX 75871131 75871166 -90779130 + AT_rich Low_complexity Low_complexity 1 35 0 5 1163 243 103 0 0 chrX 75871168 75871207 -90779089 + (GA)n Simple_repeat Simple_repeat 2 40 0 5 1163 960 145 0 7 chrX 75871207 75871360 -90778936 - B2_Mm2 SINE B2 -42 153 2 5 1163 34 72 0 0 chrX 75871992 75872061 -90778235 + AT_rich Low_complexity Low_complexity 1 69 0 5 1163 582 308 13 20 chrX 75872207 75872356 -90777940 + RSINE1 SINE B4 6 153 -12 5 1163 25 0 0 0 chrX 75872367 75872392 -90777904 + AT_rich Low_complexity Low_complexity 1 25 0 5 1163 984 232 19 0 chrX 75872530 75872741 -90777555 + B3 SINE B2 2 216 0 5 1163 22 0 0 0 chrX 75872741 75872763 -90777533 + AT_rich Low_complexity Low_complexity 1 22 0 5 1163 809 220 93 86 chrX 75873460 75873739 -90776557 - RLTR25B LTR ERVK -4 1024 744 5 1163 3625 187 48 53 chrX 75874039 75874864 -90775432 - RLTR25B LTR ERVK -207 821 1 5 1163 275 71 24 0 chrX 75875514 75875556 -90774740 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 5 1163 479 323 100 68 chrX 75875595 75875874 -90774422 + B4A SINE B4 3 290 -2 5 1163 232 239 15 0 chrX 75875928 75875995 -90774301 + (CA)n Simple_repeat Simple_repeat 2 69 0 5 1163 35485 54 2 18 chrX 75876251 75881620 -90768676 + L1Md_A LINE L1 307 5586 -297 5 1163 8350 37 0 0 chrX 75881620 75882616 -90767680 + L1Md_A LINE L1 5587 6582 0 5 1163 305 353 22 8 chrX 75882621 75882755 -90767541 - MER5A DNA MER1_type -51 138 3 5 1163 336 372 55 7 chrX 75883278 75883424 -90766872 + MLT1E2 LTR MaLR 55 207 -417 5 1163 670 393 3 57 chrX 75883506 75883838 -90766458 + MLT1E2 LTR MaLR 207 520 -107 5 1163 208 162 0 26 chrX 75883850 75883888 -90766408 + T-rich Low_complexity Low_complexity 3 39 0 5 1163 234 321 24 24 chrX 75883888 75883971 -90766325 - ID4 SINE ID 0 83 1 5 1163 262 339 0 0 chrX 75884236 75884295 -90766001 - ID4 SINE ID -19 64 6 5 1163 4005 127 11 37 chrX 75884766 75885464 -90764832 + L1_Mur1 LINE L1 2620 3299 -2587 5 1163 21892 95 5 11 chrX 75885438 75888593 -90761703 + Lx3_Mus LINE L1 355 3476 -2407 5 1163 189 0 0 0 chrX 75888593 75888614 -90761682 + (CAA)n Simple_repeat Simple_repeat 1 21 0 5 1163 21892 105 9 53 chrX 75888614 75889741 -90760555 + Lx3_Mus LINE L1 3477 4613 -1270 5 1163 5541 70 0 0 chrX 75889741 75890450 -90759846 + L1Md_T LINE L1 5874 6582 0 5 145 21892 105 9 53 chrX 75890450 75891435 -90758861 + Lx3_Mus LINE L1 4614 5585 -298 5 1164 7335 65 12 15 chrX 75891435 75892422 -90757874 + L1Md_F2 LINE L1 5587 6570 -12 5 1164 21892 114 45 15 chrX 75892422 75893893 -90756403 + Lx3_Mus LINE L1 5586 6995 -14 5 1164 420 250 138 24 chrX 75893913 75894036 -90756260 + B3 SINE B2 45 181 -35 5 1164 617 297 64 13 chrX 75894137 75894294 -90756002 - ID_B1 SINE B4 -9 215 51 5 1164 321 35 16 49 chrX 75894983 75895044 -90755252 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 5 1164 669 25 0 0 chrX 75895207 75895286 -90755010 + (TG)n Simple_repeat Simple_repeat 1 79 0 5 1164 217 378 9 26 chrX 75895333 75895447 -90754849 - PB1 SINE Alu -9 118 7 5 1164 833 294 16 0 chrX 75896001 75896188 -90754108 - B3 SINE B2 0 216 27 5 1164 8160 147 13 20 chrX 75896336 75897908 -90752388 + L1_Mus4 LINE L1 3111 4671 -1212 5 1164 6742 79 0 1 chrX 75897915 75898843 -90751453 + L1_Mus1 LINE L1 5641 6567 0 5 1164 6437 138 26 2 chrX 75898850 75900764 -90749532 + L1_Mus4 LINE L1 4670 6633 -3 5 1164 1967 236 19 12 chrX 75902768 75903200 -90747096 + Lx5 LINE L1 6612 7046 -4 5 1164 333 286 0 30 chrX 75903316 75903417 -90746879 + MER21B LTR ERV1 424 521 -342 5 1164 495 0 0 0 chrX 75903724 75903779 -90746517 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 1164 246 32 0 0 chrX 75903779 75903809 -90746487 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1164 229 295 0 16 chrX 75903825 75903887 -90746409 + (CATA)n Simple_repeat Simple_repeat 4 64 0 5 1164 401 75 0 0 chrX 75904559 75904612 -90745684 - ORR1B1 LTR MaLR 0 394 342 5 1164 1734 254 19 102 chrX 75904612 75905278 -90745018 - RMER19C LTR ERVK 0 611 1 5 1164 6969 80 3 9 chrX 75905294 75906333 -90743963 - L1_Mus2 LINE L1 -1 6565 5533 5 1164 3202 118 85 0 chrX 75906331 75907047 -90743249 - Lx LINE L1 -448 6188 5404 5 1164 387 0 0 0 chrX 75907175 75907218 -90743078 + (CAAAT)n Simple_repeat Simple_repeat 4 46 0 5 1164 418 269 15 30 chrX 75907360 75907494 -90742802 + RMER1B Other Other 11 142 -924 5 1164 864 176 55 35 chrX 75907558 75907758 -90742538 - RMER1A Other Other -6 1024 821 5 1164 626 127 0 10 chrX 75907761 75907864 -90742432 + RMER10B LTR ERVL 1 102 -296 5 1164 363 273 111 0 chrX 75907876 75907975 -90742321 - PB1D10 SINE Alu 0 117 8 5 1164 798 266 6 0 chrX 75907895 75908053 -90742243 - ID_B1 SINE B4 -56 168 10 5 1164 1397 241 145 44 chrX 75908097 75908553 -90741743 - RMER13B LTR ERVK -14 894 393 5 1164 6519 65 3 18 chrX 75908553 75909421 -90740875 - RLTR13A LTR ERVK 0 855 1 5 1164 16209 43 31 10 chrX 75909429 75911181 -90739115 - ETnERV3-int LTR ERVK -1174 6070 4010 5 1164 315 0 0 0 chrX 75911181 75911216 -90739080 + (TTAA)n Simple_repeat Simple_repeat 3 37 0 5 1164 16870 28 20 5 chrX 75911216 75913419 -90736877 - ETnERV3-int LTR ERVK -2483 4761 1742 5 1164 12947 23 16 18 chrX 75913423 75915093 -90735203 + ETnERV3-int LTR ERVK 1065 2731 -3077 5 1164 1087 22 0 0 chrX 75915088 75915225 -90735071 - ETnERV3-int LTR ERVK -4752 1056 920 5 1164 1473 205 10 30 chrX 75915225 75915527 -90734769 - RMER13B LTR ERVK -594 314 19 5 1164 1086 106 6 6 chrX 75915527 75915688 -90734608 + RLTR9D LTR ERVK 1 161 -242 5 1164 6480 60 2 0 chrX 75915688 75916505 -90733791 + L1Md_F2 LINE L1 5763 6581 -1 5 1164 666 89 30 0 chrX 75916511 75916612 -90733684 + RLTR9D LTR ERVK 308 411 -4 5 1164 365 273 45 15 chrX 75916639 75916773 -90733523 - Arthur1 DNA Tip100 -3274 673 536 5 1164 2088 163 9 67 chrX 75917148 75917582 -90732714 - RLTR9E LTR ERVK 0 409 1 5 1164 340 395 30 26 chrX 75917848 75918116 -90732180 + Kanga1c DNA Tc2 378 646 -83 5 1164 273 302 83 28 chrX 75919211 75919320 -90730976 - L2 LINE L2 -2064 1355 1241 5 1164 7481 61 9 0 chrX 75919467 75921162 -90729134 - L1Md_F2 LINE L1 -14 6571 4863 5 1164 6561 74 3 8 chrX 75921153 75922895 -90727401 - L1Md_F2 LINE L1 -3729 2157 328 5 1164 7731 86 4 7 chrX 75922891 75924299 -90725997 - L1Md_F LINE L1 -4265 1618 207 5 1164 546 319 68 38 chrX 75926016 75926309 -90723987 - L3 LINE CR1 -535 3954 3653 5 1164 362 331 65 33 chrX 75926331 75926484 -90723812 + MER68 LTR ERVL 1 158 -405 5 1164 3355 78 26 58 chrX 75928651 75929155 -90721141 - L1_Mus2 LINE L1 0 6566 6079 5 1164 11569 66 0 24 chrX 75929194 75931146 -90719150 + L1Md_T LINE L1 3796 5586 -297 5 1164 8525 29 1 0 chrX 75931146 75932141 -90718155 + L1Md_T LINE L1 5587 6582 0 5 1164 447 316 96 53 chrX 75932162 75932349 -90717947 + B3A SINE B2 17 211 -5 5 1164 564 269 40 27 chrX 75932406 75932673 -90717623 + L1MA4 LINE L1 5662 5931 -369 5 1164 441 350 40 34 chrX 75932714 75932862 -90717434 - RSINE1 SINE B4 -14 151 3 5 1164 306 0 0 0 chrX 75933165 75933199 -90717097 + (CAA)n Simple_repeat Simple_repeat 2 35 0 5 1164 2912 171 50 30 chrX 75933466 75934050 -90716246 + RLTR1D LTR ERV1 1 605 0 5 1164 194 220 20 20 chrX 75934394 75934445 -90715851 + MER5B DNA MER1_type 86 136 -42 5 1164 462 36 0 0 chrX 75935331 75935387 -90714909 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1164 22 0 0 0 chrX 75935443 75935465 -90714831 + AT_rich Low_complexity Low_complexity 1 22 0 5 1164 367 282 24 0 chrX 75935500 75935585 -90714711 - PB1D9 SINE Alu -33 87 1 5 1164 835 236 14 42 chrX 75935586 75935798 -90714498 - B3 SINE B2 -6 210 5 5 1164 252 242 9 149 chrX 75935798 75935816 -90714480 - MT2B LTR ERVL -431 170 154 5 1164 333 323 76 29 chrX 75936111 75936604 -90713692 - L1M2 LINE L1 -2003 2613 2153 5 1164 3595 208 22 28 chrX 75936660 75937539 -90712757 + ORR1C1-int LTR MaLR 505 1509 0 5 1164 1965 187 19 35 chrX 75937547 75937923 -90712373 + ORR1C1 LTR MaLR 9 378 0 5 1164 436 215 0 0 chrX 75938363 75938442 -90711854 + Lx8 LINE L1 7252 7330 -143 5 1164 11954 149 36 48 chrX 75938819 75941849 -90708447 + L1_Mur2 LINE L1 898 3895 -1982 5 1164 922 220 43 132 chrX 75941847 75942151 -90708145 + Lx4B LINE L1 6778 7054 -4 5 1164 220 104 0 59 chrX 75942155 75942206 -90708090 + A-rich Low_complexity Low_complexity 4 51 0 5 1164 454 104 21 0 chrX 75942549 75942645 -90707651 + (TA)n Simple_repeat Simple_repeat 2 99 0 5 1164 189 107 0 0 chrX 75942784 75942812 -90707484 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1164 2081 129 6 0 chrX 75943966 75944283 -90706013 - ORR1A2 LTR MaLR -8 319 1 5 1164 261 209 0 0 chrX 75944435 75944478 -90705818 - B4A SINE B4 -249 43 1 5 1164 1302 296 67 21 chrX 75944537 75944924 -90705372 + MTD LTR MaLR 1 405 -14 5 1164 514 345 93 75 chrX 75945009 75945513 -90704783 - MLT2B2 LTR ERVL 0 515 3 5 1164 761 191 103 91 chrX 75947579 75947965 -90702331 + RMER2 LTR ERV1 135 567 0 5 1164 644 296 6 12 chrX 75948280 75948444 -90701852 - RSINE1 SINE B4 0 165 3 5 1164 441 307 40 54 chrX 75948788 75948799 -90701497 - ID_B1 SINE B4 0 224 158 5 1164 689 206 71 8 chrX 75948799 75948926 -90701370 - B1_Mur2 SINE Alu -7 142 8 5 1164 1077 76 146 0 chrX 75949491 75949649 -90700647 + B2_Mm2 SINE B2 1 181 -14 5 1164 420 0 19 0 chrX 75949649 75949703 -90700593 + L1Md_T LINE L1 6526 6580 -2 5 1164 462 368 21 5 chrX 75950807 75950993 -90699303 - B3A SINE B2 -6 192 4 5 1164 476 257 44 0 chrX 75951025 75951138 -90699158 + B3A SINE B2 3 120 -78 5 1164 818 279 0 25 chrX 75951266 75951468 -90698828 - B3A SINE B2 0 198 2 5 1164 3205 88 2 2 chrX 75953072 75953472 -90696824 - L1_Mus1 LINE L1 0 6567 6168 6 1164 180 0 0 0 chrX 75954008 75954028 -90696268 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 1164 2920 39 0 48 chrX 75954141 75954495 -90695801 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 1164 56528 20 17 5 chrX 75954495 75960892 -90689404 + IAPEz-int LTR ERVK 8 6481 0 6 1164 2920 39 0 48 chrX 75960892 75961246 -90689050 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 1164 731 348 44 31 chrX 75962478 75962955 -90687341 + MERVK26-int LTR ERVK 6123 6605 -314 6 1164 3580 33 5 0 chrX 75963184 75963578 -90686718 + MTA_Mm LTR MaLR 1 396 0 6 1164 477 76 0 0 chrX 75964017 75964083 -90686213 + (TCC)n Simple_repeat Simple_repeat 3 68 0 6 1164 1233 62 7 0 chrX 75964374 75964520 -90685776 + B1_Mus1 SINE Alu 2 148 0 6 1164 427 142 9 9 chrX 75964520 75964627 -90685669 + A-rich Low_complexity Low_complexity 6 112 0 6 1164 524 204 9 9 chrX 75964827 75964936 -90685360 + L1_Mur2 LINE L1 5540 5648 -229 6 1164 677 351 39 27 chrX 75965057 75965590 -90684706 + RLTR4_MM-int LTR ERV1 3925 4857 -2234 6 1164 1396 315 19 12 chrX 75965930 75966412 -90683884 + MuRRS4-int LTR ERV1 3531 4015 -1048 6 1164 536 172 0 0 chrX 75966837 75966924 -90683372 + RMER2 LTR ERV1 1 87 -480 6 1164 1766 164 161 14 chrX 75966925 75967347 -90682949 - LTRIS4 LTR ERV1 0 507 24 6 1164 1160 219 102 44 chrX 75967367 75967750 -90682546 + RMER2 LTR ERV1 159 563 -4 6 1164 444 92 15 0 chrX 75967751 75967816 -90682480 + Lx6 LINE L1 5682 5747 -1713 6 1164 23932 99 21 3 chrX 75967846 75971435 -90678861 + L1Md_F2 LINE L1 2397 6045 -537 6 1164 4314 82 39 47 chrX 75971435 75972027 -90678269 + LTRIS_Mus LTR ERV1 1 587 0 6 1164 3472 71 47 11 chrX 75972027 75972060 -90678236 + L1Md_F2 LINE L1 6046 6074 -508 6 1164 4858 88 100 14 chrX 75972061 75972806 -90677490 + RLTR13C2 LTR ERVK 1 902 0 6 1164 3780 97 14 2 chrX 75972806 75973304 -90676992 + L1_Mus1 LINE L1 6063 6566 -1 6 1164 1572 234 91 32 chrX 75973313 75973399 -90676897 + Lx6 LINE L1 5735 5826 -1634 6 1164 234 0 0 0 chrX 75973399 75973425 -90676871 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 6 1164 1572 234 91 32 chrX 75973425 75973584 -90676712 + Lx6 LINE L1 5827 5990 -1470 6 1164 4196 166 148 40 chrX 75973584 75974472 -90675824 - RLTR13C1 LTR ERVK 0 983 1 6 1164 1572 234 91 32 chrX 75974472 75974729 -90675567 + Lx6 LINE L1 5991 6267 -1193 6 1164 955 300 47 30 chrX 75974716 75974974 -90675322 + Lx6 LINE L1 6500 6748 -712 6 1164 404 118 15 0 chrX 75974974 75975042 -90675254 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 6 1164 955 279 28 20 chrX 75975042 75975237 -90675059 + Lx6 LINE L1 6749 7056 -404 6 1164 1203 58 0 0 chrX 75975378 75975534 -90674762 + (TTCTC)n Simple_repeat Simple_repeat 5 160 0 6 1164 214 262 136 91 chrX 75975542 75975630 -90674666 - B1F2 SINE Alu -51 98 7 6 1164 2073 196 15 13 chrX 75975912 75976366 -90673930 + L1_Mur1 LINE L1 890 1344 -5640 6 1164 656 118 39 0 chrX 75976375 75976477 -90673819 + L1_Mur1 LINE L1 2854 2959 -2918 6 1164 719 286 57 41 chrX 75976789 75977033 -90673263 - RLTR16 LTR ERVK -234 271 24 6 1164 10653 171 109 114 chrX 75977042 75977543 -90672753 + Lx4B LINE L1 2954 3473 -2404 6 1164 2920 106 38 83 chrX 75977543 75978048 -90672248 + RLTR45 LTR ERVK 1 482 0 6 1164 10653 171 109 114 chrX 75978048 75978675 -90671621 + Lx4B LINE L1 3474 4270 -1607 6 1164 1353 167 8 12 chrX 75978675 75978923 -90671373 - BGLII_B LTR ERVK -191 250 4 6 1164 10653 171 109 114 chrX 75978923 75978952 -90671344 + Lx4B LINE L1 4271 4309 -1568 6 1164 1188 90 0 0 chrX 75978952 75979096 -90671200 + B1_Mm SINE Alu 2 145 -2 6 1164 491 0 17 0 chrX 75979096 75979155 -90671141 + (TAAAA)n Simple_repeat Simple_repeat 2 61 0 6 1164 10653 194 67 52 chrX 75979155 75981732 -90668564 + Lx4B LINE L1 4310 6949 -51 6 1164 648 36 0 0 chrX 75981745 75981828 -90668468 + (TAGA)n Simple_repeat Simple_repeat 2 84 0 6 1164 898 245 48 24 chrX 75981993 75982202 -90668094 + B3 SINE B2 1 214 -2 6 1164 26 30 0 0 chrX 75982273 75982306 -90667990 + AT_rich Low_complexity Low_complexity 1 33 0 6 1164 231 0 50 25 chrX 75982459 75982499 -90667797 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 6 1164 303 348 26 68 chrX 75982678 75982869 -90667427 + L1M4 LINE L1 4378 4560 -1586 6 1164 22 35 0 0 chrX 75984710 75984739 -90665557 + AT_rich Low_complexity Low_complexity 1 29 0 6 1164 8651 86 2 4 chrX 75984871 75986715 -90663581 - L1Md_F2 LINE L1 -10 6572 4733 6 1164 2820 69 11 33 chrX 75986719 75987081 -90663215 - IAPEY2_LTR LTR ERVK -3 354 1 6 1164 5385 95 18 8 chrX 75987081 75987852 -90662444 - IAPEy-int LTR ERVK 0 7513 6735 6 1164 3454 84 9 2 chrX 75987842 75988293 -90662003 - IAPEy-int LTR ERVK -1367 6214 5761 6 1164 3436 86 0 16 chrX 75988281 75988731 -90661565 - IAPEy-int LTR ERVK -1936 5645 5203 6 1164 650 50 47 66 chrX 75988986 75989092 -90661204 - IAPEy-int LTR ERVK -2911 4670 4567 6 1164 435 103 0 0 chrX 75989089 75989147 -90661149 - IAPEy-int LTR ERVK -3782 3624 3567 6 1164 674 238 374 25 chrX 75989173 75989395 -90660901 - IAPEy-int LTR ERVK -4653 2753 2454 6 1164 500 204 88 0 chrX 75989408 75989521 -90660775 - RMER16-int LTR ERVK -5077 1060 938 6 1164 1648 179 107 50 chrX 75989526 75990008 -90660288 - RMER16-int LTR ERVK -4750 656 251 6 1164 1912 152 38 27 chrX 75990120 75990603 -90659693 - IAPEy-int LTR ERVK -6629 952 407 6 1164 2546 127 0 89 chrX 75991029 75991503 -90658793 - IAPEy-int LTR ERVK -7081 432 1 6 1164 2785 74 11 36 chrX 75991508 75991871 -90658425 - IAPEY2_LTR LTR ERVK -3 354 1 6 1164 24202 128 28 25 chrX 75991872 75996341 -90653955 - L1Md_F LINE L1 -1145 4738 250 6 1164 315 328 42 69 chrX 75996422 75996566 -90653730 - B3A SINE B2 0 198 59 6 1164 624 309 5 68 chrX 75996641 75996863 -90653433 - B3 SINE B2 -8 208 1 6 1164 1030 106 0 47 chrX 75996874 75997023 -90653273 - B1_Mus1 SINE Alu -5 143 2 6 1164 21 36 0 0 chrX 75997714 75997742 -90652554 + AT_rich Low_complexity Low_complexity 1 28 0 6 1164 423 0 0 0 chrX 75998280 75998327 -90651969 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1164 591 199 43 64 chrX 75998479 75998619 -90651677 - B1_Mur1 SINE Alu 0 149 13 6 1164 439 239 32 96 chrX 75998619 75998634 -90651662 - ID_B1 SINE B4 0 222 78 6 1164 33 0 0 0 chrX 75998634 75998667 -90651629 + AT_rich Low_complexity Low_complexity 1 33 0 6 1164 997 230 58 126 chrX 75999176 75999340 -90650956 - RCHARR1 DNA MER1_type -6 968 850 6 1164 934 244 43 10 chrX 75999340 75999547 -90650749 - B3 SINE B2 -2 214 1 6 1164 997 230 58 126 chrX 75999547 75999795 -90650501 - RCHARR1 DNA MER1_type -125 849 584 6 1164 1086 145 99 5 chrX 75999797 75999998 -90650298 - ORR1B1 LTR MaLR 0 394 175 6 1164 810 192 19 13 chrX 76000002 76000160 -90650136 - ORR1B1 LTR MaLR -195 199 41 1 1164 394 232 0 21 chrX 76000206 76000303 -90649993 - ORR1B1 LTR MaLR -257 137 43 2 1164 1073 285 61 15 chrX 76000312 76000732 -90649564 - RCHARR1 DNA MER1_type -388 586 113 3 1164 444 314 51 20 chrX 76001003 76001198 -90649098 + Lx8 LINE L1 7039 7239 -234 4 1164 515 262 53 41 chrX 76001233 76001404 -90648892 + RMER15 LTR ERVL 403 575 0 5 1164 501 264 30 30 chrX 76001404 76001536 -90648760 + B1F2 SINE Alu 18 149 0 6 1164 306 138 0 0 chrX 76001638 76001696 -90648600 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 1164 568 59 24 0 chrX 76001726 76001811 -90648485 + (TA)n Simple_repeat Simple_repeat 1 87 0 8 1164 261 0 0 0 chrX 76001811 76001839 -90648457 + (CA)n Simple_repeat Simple_repeat 2 30 0 9 1164 181 327 0 35 chrX 76002163 76002220 -90648076 + L4 LINE RTE 621 675 -1354 1 1164 1156 216 14 0 chrX 76002223 76002436 -90647860 - URR1B DNA MER1_type 0 225 10 1 1164 506 155 12 0 chrX 76002434 76002518 -90647778 + ORR1B2-int LTR MaLR 885 969 -540 1 1164 2252 108 10 0 chrX 76002518 76002832 -90647464 - ORR1A2 LTR MaLR -8 319 3 1 1164 2583 136 130 27 chrX 76002832 76003321 -90646975 + ORR1B2-int LTR MaLR 968 1509 0 1 1164 1634 161 82 70 chrX 76003321 76003676 -90646620 + ORR1B2 LTR MaLR 1 359 -8 1 1164 234 62 0 0 chrX 76003885 76003917 -90646379 + (ATG)n Simple_repeat Simple_repeat 3 34 0 1 1164 873 245 19 29 chrX 76004781 76004991 -90645305 + B3 SINE B2 9 216 0 1 1164 279 0 0 0 chrX 76005460 76005491 -90644805 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 1164 14912 202 98 42 chrX 76005496 76007117 -90643179 - Lx4B LINE L1 -16 7042 5308 1 1164 1096 90 14 0 chrX 76007117 76007262 -90643034 - B1_Mus2 SINE Alu 0 147 1 1 1164 14912 155 106 106 chrX 76007262 76009991 -90640305 - Lx4B LINE L1 -570 5307 2642 1 1164 2810 49 2 128 chrX 76009991 76010435 -90639861 + RLTR10 LTR ERVK 1 388 -2 1 1164 14912 155 106 106 chrX 76010435 76010994 -90639302 - Lx4B LINE L1 -3236 2641 2079 1 1164 4333 257 41 10 chrX 76011468 76012538 -90637758 - Lx5 LINE L1 -48 7002 5900 2 1164 1356 179 123 3 chrX 76012531 76012823 -90637473 + Lx4B LINE L1 5602 5928 -1130 2 1164 675 284 68 50 chrX 76012857 76013279 -90637017 - L1MC1 LINE L1 -2061 5934 5480 2 1164 580 283 7 0 chrX 76013365 76013503 -90636793 - Lx8 LINE L1 -793 6680 6542 2 1164 868 206 265 21 chrX 76013504 76013832 -90636464 - RMER17C LTR ERVK 0 410 3 2 1164 2709 158 69 12 chrX 76013836 76014316 -90635980 - RMER17C-int LTR ERVK -2 3236 2730 2 1164 2096 143 3 3 chrX 76014317 76014661 -90635635 - L1_Mur2 LINE L1 -473 5404 5061 2 1164 231 298 0 0 chrX 76015261 76015318 -90634978 - MIRc SINE MIR -39 229 173 2 1164 291 171 0 0 chrX 76015486 76015562 -90634734 + T-rich Low_complexity Low_complexity 1 76 0 2 1164 1198 54 0 0 chrX 76015562 76015710 -90634586 - B1_Mus1 SINE Alu 0 148 1 2 1164 14836 190 9 122 chrX 76016139 76016755 -90633541 - L1_Mur1 LINE L1 -939 4938 4439 2 1164 1080 116 0 0 chrX 76016755 76016902 -90633394 - B1_Mus2 SINE Alu 0 147 1 3 1164 20626 122 9 27 chrX 76016902 76019276 -90631020 - L1_Mur1 LINE L1 -1433 4453 2394 2 1164 2329 95 82 28 chrX 76019276 76019666 -90630630 - IAPLTR2a LTR ERVK 0 411 1 3 1164 20626 110 9 11 chrX 76019666 76020527 -90629769 - L1_Mur1 LINE L1 -3484 2402 1552 2 1164 1042 109 0 0 chrX 76020527 76020674 -90629622 - B1_Mus2 SINE Alu 0 147 1 3 1164 20626 114 34 12 chrX 76020674 76021602 -90628694 - L1_Mur1 LINE L1 -4335 1551 604 2 145 663 257 157 26 chrX 76021634 76022035 -90628261 + L1MB8 LINE L1 5710 6156 -18 3 1165 1347 281 57 20 chrX 76022169 76022575 -90627721 - MTC LTR MaLR 0 421 1 3 1165 734 303 77 7 chrX 76022600 76022949 -90627347 + Lx8 LINE L1 5439 5815 -1881 3 1165 1955 314 10 3 chrX 76023420 76024014 -90626282 + Lx8 LINE L1 6189 6786 -687 3 1165 632 289 111 108 chrX 76024023 76024411 -90625885 - RMER20B LTR ERVK -28 599 211 3 1165 894 68 8 0 chrX 76024391 76024509 -90625787 + B1_Mus1 SINE Alu 30 148 0 3 1165 4028 163 7 3 chrX 76024509 76025198 -90625098 + L1Md_F2 LINE L1 329 1020 -5596 3 1165 29193 97 19 4 chrX 76025189 76026000 -90624296 + L1Md_F2 LINE L1 1146 1961 -3922 3 1165 234 0 0 0 chrX 76026000 76026026 -90624270 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 3 1165 29193 94 17 3 chrX 76026026 76029586 -90620710 + L1Md_F2 LINE L1 1962 5583 -300 3 1165 7208 89 2 3 chrX 76029587 76030584 -90619712 + L1Md_F2 LINE L1 5587 6582 0 3 1165 284 132 32 21 chrX 76030588 76030681 -90619615 + A-rich Low_complexity Low_complexity 2 95 0 4 1165 581 251 111 6 chrX 76030869 76031041 -90619255 + ORR1D2 LTR MaLR 146 335 -35 4 1165 222 314 12 0 chrX 76031146 76031232 -90619064 + (TGG)n Simple_repeat Simple_repeat 1 87 0 4 1165 369 0 0 0 chrX 76032273 76032314 -90617982 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1165 204 209 0 82 chrX 76032988 76033061 -90617235 + A-rich Low_complexity Low_complexity 1 67 0 4 1165 2256 239 46 87 chrX 76034069 76034738 -90615558 - RLTR26 LTR ERVK 0 642 1 4 1165 439 245 88 26 chrX 76034755 76035126 -90615170 - L1M3 LINE L1 -807 5484 5090 4 1165 2356 197 43 120 chrX 76035637 76036260 -90614036 + RMER15 LTR ERVL 1 575 0 4 1165 2575 234 14 37 chrX 76036813 76037381 -90612915 + RLTR20B3 LTR ERVK 23 577 0 4 1165 296 206 0 14 chrX 76037564 76037638 -90612658 + L1M2 LINE L1 5402 5474 -838 4 1165 227 111 156 0 chrX 76037724 76037769 -90612527 - RMER20B LTR ERVK 0 627 576 5 1165 406 198 139 117 chrX 76037806 76037943 -90612353 - RMER20B LTR ERVK -137 490 351 5 1165 432 0 0 0 chrX 76037989 76038037 -90612259 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1165 529 241 145 17 chrX 76038085 76038326 -90611970 + RLTR10A LTR ERVK 140 411 0 5 1165 414 0 0 0 chrX 76038327 76038373 -90611923 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1165 1458 177 96 7 chrX 76038373 76038674 -90611622 - RMER20B LTR ERVK -294 333 6 5 1165 559 104 149 9 chrX 76038822 76038929 -90611367 + L1_Mur2 LINE L1 2333 2454 -3423 5 1165 618 109 0 0 chrX 76038929 76039021 -90611275 + (CAAAG)n Simple_repeat Simple_repeat 1 92 0 5 1165 237 222 0 0 chrX 76039023 76039068 -90611228 + L1_Mur2 LINE L1 2458 2502 -3375 5 1165 3778 189 31 29 chrX 76039089 76040157 -90610139 - L1_Mur3 LINE L1 -3827 2050 980 5 1165 4035 34 8 0 chrX 76040298 76040769 -90609527 + MT2C_Mm LTR ERVL 1 475 0 5 1165 1036 107 0 0 chrX 76040889 76041029 -90609267 + B1_Mus1 SINE Alu 3 142 -6 5 1165 3610 145 38 5 chrX 76041386 76041960 -90608336 - RLTR17 LTR ERVK -93 599 7 5 1165 570 331 55 20 chrX 76042324 76042577 -90607719 - MER58B DNA MER1_type -2 339 78 6 1165 997 292 28 21 chrX 76042584 76042867 -90607429 + B4A SINE B4 8 292 0 6 1165 180 216 0 0 chrX 76042892 76042943 -90607353 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1165 228 377 14 0 chrX 76042943 76043012 -90607284 - MER58B DNA MER1_type -252 89 20 6 1165 248 338 81 0 chrX 76043622 76043696 -90606600 - B4A SINE B4 -179 113 34 6 1165 427 194 9 97 chrX 76044033 76044045 -90606251 + MT2B LTR ERVL 154 155 -446 6 1165 914 110 14 0 chrX 76044045 76044190 -90606106 + B1_Mm SINE Alu 1 147 0 6 1165 1447 212 224 33 chrX 76044597 76045016 -90605280 - Lx5 LINE L1 -64 6986 6488 6 1165 29 0 0 0 chrX 76045321 76045350 -90604946 + AT_rich Low_complexity Low_complexity 1 29 0 6 1165 2561 156 50 74 chrX 76045444 76045661 -90604635 + Lx4B LINE L1 6531 6744 -314 6 1165 3391 35 2 0 chrX 76045661 76046056 -90604240 + MTA_Mm LTR MaLR 1 396 0 6 1165 8175 63 23 3 chrX 76046056 76047132 -90603164 + MTA_Mm-int LTR MaLR 1 1098 0 6 1165 3275 48 2 2 chrX 76047132 76047528 -90602768 + MTA_Mm LTR MaLR 1 396 0 6 1165 2561 156 50 74 chrX 76047528 76047847 -90602449 + Lx4B LINE L1 6745 7054 -4 6 1165 362 235 24 0 chrX 76048285 76048370 -90601926 - MTEb LTR MaLR -5 374 288 7 1165 1445 185 172 3 chrX 76048503 76048817 -90601479 - ORR1B2 LTR MaLR 0 367 1 7 1165 180 0 0 0 chrX 76049106 76049126 -90601170 + (CAA)n Simple_repeat Simple_repeat 2 21 0 7 1165 1222 218 103 53 chrX 76050793 76051113 -90599183 + Lx2B LINE L1 6665 7000 0 7 1165 290 146 0 0 chrX 76051235 76051283 -90599013 - MTEb LTR MaLR -2 377 330 7 1165 33 56 0 0 chrX 76051737 76051791 -90598505 + AT_rich Low_complexity Low_complexity 1 54 0 7 1165 2756 118 87 2 chrX 76051985 76052434 -90597862 + L1Md_F2 LINE L1 515 1001 -5615 7 1165 25224 76 30 9 chrX 76052438 76052485 -90597811 + L1Md_F2 LINE L1 1922 1968 -3915 7 1165 273 29 0 0 chrX 76052485 76052519 -90597777 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 7 1165 25224 76 30 9 chrX 76052519 76056060 -90594236 + L1Md_F2 LINE L1 1969 5585 -298 7 1165 6896 106 4 15 chrX 76056061 76057067 -90593229 + L1Md_F2 LINE L1 5587 6581 -1 7 1165 204 309 0 18 chrX 76057068 76057124 -90593172 - MIRb SINE MIR -154 114 60 7 1165 585 264 92 55 chrX 76057452 76057800 -90592496 + L1MA7 LINE L1 5746 6106 -185 7 1165 447 33 0 0 chrX 76058476 76058536 -90591760 - B1_Mm SINE Alu -1 146 87 8 1165 4337 111 33 0 chrX 76058536 76059569 -90590727 - L1Md_F2 LINE L1 -539 6043 4913 8 1165 29489 82 1 0 chrX 76059565 76063808 -90586488 + L1Md_F2 LINE L1 1343 5586 -297 8 1165 7848 62 2 0 chrX 76063809 76064801 -90585495 + L1Md_F2 LINE L1 5588 6581 -1 8 1165 17131 97 58 18 chrX 76064831 76067699 -90582597 - L1Md_F2 LINE L1 -1416 4467 1485 8 1165 3512 140 3 0 chrX 76067697 76068289 -90582007 - L1Md_F2 LINE L1 -5631 985 392 8 1165 219 36 0 0 chrX 76068611 76068639 -90581657 + (TTATA)n Simple_repeat Simple_repeat 3 30 0 8 1165 2073 158 68 24 chrX 76068639 76069021 -90581275 - RLTR9D LTR ERVK -4 399 1 8 1165 384 122 27 13 chrX 76069021 76069096 -90581200 - ETnERV2-int LTR ERVK 0 7406 7331 8 1165 5123 179 8 20 chrX 76069308 76070630 -90579666 - ETnERV2-int LTR ERVK -1179 6227 5398 8 1165 7295 90 43 0 chrX 76070643 76071912 -90578384 - Lx3_Mus LINE L1 -278 6731 5414 8 1165 225 0 0 0 chrX 76071934 76071959 -90578337 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1165 258 32 0 0 chrX 76071980 76072011 -90578285 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 1165 274 216 0 0 chrX 76072013 76072064 -90578232 + (TA)n Simple_repeat Simple_repeat 1 51 0 8 1165 523 373 43 11 chrX 76072064 76072077 -90578219 - B3 SINE B2 -13 203 191 8 1165 189 0 0 0 chrX 76072077 76072098 -90578198 + (CA)n Simple_repeat Simple_repeat 2 22 0 9 1165 315 49 0 0 chrX 76072100 76072141 -90578155 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1165 523 373 43 11 chrX 76072141 76072311 -90577985 - B3 SINE B2 -26 190 13 8 1165 213 39 0 0 chrX 76072791 76072817 -90577479 + (ATG)n Simple_repeat Simple_repeat 2 27 0 9 1165 720 207 0 15 chrX 76072987 76073124 -90577172 + B1_Mur4 SINE Alu 1 135 -15 9 1165 26632 123 19 8 chrX 76073565 76078820 -90571476 + L1_Mus1 LINE L1 1262 6558 -9 9 1165 1438 98 61 0 chrX 76078831 76079076 -90571220 + MusHAL1 LINE L1 1251 1510 -1202 9 1165 9569 185 26 38 chrX 76079071 76081404 -90568892 + L1_Mus4 LINE L1 2995 5298 -585 9 1165 703 85 0 8 chrX 76081408 76081526 -90568770 + L1Md_A LINE L1 614 730 -5994 9 1165 911 95 0 8 chrX 76081526 76081653 -90568643 + RLTR33 LTR ERVK 211 336 -342 9 1165 295 256 117 43 chrX 76081876 76081970 -90568326 + MLT1A1 LTR MaLR 3 103 -287 9 1165 304 327 78 26 chrX 76082026 76082180 -90568116 + MLT1A1 LTR MaLR 243 404 -4 9 1165 248 264 0 0 chrX 76082288 76082341 -90567955 - MIR SINE MIR -144 118 66 1 1165 217 352 57 0 chrX 76082376 76082464 -90567832 + L2b LINE L2 3278 3370 -5 1 1165 1966 160 14 14 chrX 76082571 76082958 -90567338 + L1_Mus4 LINE L1 5271 5660 -784 9 1165 3709 64 19 0 chrX 76082959 76083425 -90566871 - MT2C_Mm LTR ERVL 0 475 1 1 1165 265 53 0 0 chrX 76083425 76083463 -90566833 - MERVL-int LTR ERVL 0 5485 5448 1 1165 318 153 26 53 chrX 76083463 76083539 -90566757 - ORR1A3-int LTR MaLR -1323 640 567 1 1165 39419 65 11 14 chrX 76083661 76089013 -90561283 - MERVL-int LTR ERVL -130 5355 22 1 1165 6542 104 12 11 chrX 76089013 76089034 -90561262 + L1_Mus4 LINE L1 5602 5627 -1009 9 1165 3595 75 19 0 chrX 76089034 76089500 -90560796 - MT2C_Mm LTR ERVL 0 475 1 1 1165 6542 104 12 11 chrX 76089500 76090497 -90559799 + L1_Mus4 LINE L1 5628 6621 -15 9 1165 563 257 60 18 chrX 76090893 76091111 -90559185 + L1_Mur3 LINE L1 2088 2314 -3566 1 1165 396 264 8 8 chrX 76091181 76091303 -90558993 + L1VL1 LINE L1 279 400 -6022 1 1165 400 257 43 7 chrX 76091422 76091563 -90558733 + L1Md_F LINE L1 664 809 -5807 1 1165 8428 143 2 42 chrX 76091565 76093620 -90556676 + L1Md_F LINE L1 725 2630 -3253 1 1165 3862 55 0 0 chrX 76093620 76094094 -90556202 - L1Md_F2 LINE L1 -3 6579 6106 1 1165 8343 192 5 91 chrX 76094094 76094961 -90555335 + L1Md_F LINE L1 2626 3303 -2583 1 1165 2748 202 97 75 chrX 76094957 76096313 -90553983 + L1_Mur3 LINE L1 2343 3990 -1896 1 1165 3684 255 23 22 chrX 76096340 76097296 -90553000 + Lx6 LINE L1 6495 7451 -9 1 1165 203 438 64 10 chrX 76097814 76098017 -90552279 + L4 LINE RTE 1111 1324 -705 1 1165 432 0 0 0 chrX 76098595 76098643 -90551653 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1165 238 291 42 17 chrX 76098882 76099001 -90551295 - Lx6 LINE L1 -27 7433 7312 1 1165 920 278 70 1 chrX 76099018 76099337 -90550959 - Lx6 LINE L1 -726 6324 5967 1 1165 189 0 0 0 chrX 76100275 76100296 -90550000 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 1165 357 317 3 19 chrX 76102150 76102350 -90547946 + CT-rich Low_complexity Low_complexity 1 196 0 1 1165 259 228 0 0 chrX 76103148 76103205 -90547091 + CT-rich Low_complexity Low_complexity 3 59 0 1 1165 2937 66 14 72 chrX 76103632 76104075 -90546221 - MT2_Mm LTR ERVL -76 417 1 1 1165 409 241 11 0 chrX 76104168 76104255 -90546041 - RMER10B LTR ERVL -57 341 254 1 1165 7223 133 16 25 chrX 76105090 76106397 -90543899 + Lx3A LINE L1 5678 6973 -8 1 1165 415 355 29 0 chrX 76106401 76106539 -90543757 + B3 SINE B2 70 211 -5 1 1165 346 276 107 44 chrX 76106729 76106749 -90543547 - ORR1D1 LTR MaLR -7 367 349 1 1165 354 23 0 0 chrX 76106749 76106792 -90543504 + (TTG)n Simple_repeat Simple_repeat 3 45 0 1 1165 346 276 107 44 chrX 76106792 76106930 -90543366 - ORR1D1 LTR MaLR -26 348 199 1 1165 504 219 0 112 chrX 76108303 76108388 -90541908 + B4 SINE B4 24 85 -207 1 1165 453 219 167 0 chrX 76108388 76108484 -90541812 + PB1D9 SINE Alu 3 114 -6 1 1165 550 261 71 120 chrX 76108511 76108603 -90541693 + B4 SINE B4 119 209 -83 1 1165 263 26 0 49 chrX 76108603 76108644 -90541652 + (TTG)n Simple_repeat Simple_repeat 2 40 0 1 1165 550 261 71 120 chrX 76108644 76108734 -90541562 + B4 SINE B4 210 292 0 1 1165 1721 103 4 0 chrX 76108849 76109102 -90541194 + L1_Mus4 LINE L1 6383 6636 0 1 1165 1938 266 71 26 chrX 76109357 76110005 -90540291 - Lx8 LINE L1 -4 7469 6793 1 1165 376 308 80 47 chrX 76110023 76110173 -90540123 - RSINE1 SINE B4 0 165 11 1 1165 611 237 12 42 chrX 76110184 76110351 -90539945 - Lx8 LINE L1 -675 6798 6637 1 1165 316 261 0 0 chrX 76110359 76110428 -90539868 + Lx8 LINE L1 6506 6574 -899 1 1165 249 281 0 0 chrX 76110799 76110856 -90539440 - ORR1D1 LTR MaLR -317 62 6 1 1165 3325 46 2 0 chrX 76110879 76111274 -90539022 - MTA_Mm LTR MaLR 0 396 1 1 1165 5340 67 4 0 chrX 76111274 76111978 -90538318 - MTA_Mm-int LTR MaLR 0 1098 392 1 1165 717 236 0 0 chrX 76112691 76112818 -90537478 - RSINE1 SINE B4 -36 129 3 1 1165 25 0 0 0 chrX 76112962 76112987 -90537309 + AT_rich Low_complexity Low_complexity 1 25 0 1 1165 23 0 0 0 chrX 76113246 76113269 -90537027 + AT_rich Low_complexity Low_complexity 1 23 0 1 1165 2827 135 10 9 chrX 76113501 76114427 -90535869 + L1VL4 LINE L1 380 1303 -2256 1 1165 1079 166 39 79 chrX 76114427 76114656 -90535640 - ORR1B1 LTR MaLR -127 267 48 1 1165 270 106 128 0 chrX 76114644 76114691 -90535605 + ORR1B2 LTR MaLR 259 311 -56 1 1165 6034 84 19 5 chrX 76114705 76115580 -90534716 - L1_Mus2 LINE L1 0 6566 5679 1 1165 11563 108 14 8 chrX 76115568 76117414 -90532882 + L1_Mm LINE L1 3681 5538 -345 1 1165 422 279 57 62 chrX 76117414 76117624 -90532672 + ORR1B1 LTR MaLR 113 321 -8 1 1165 7003 188 47 134 chrX 76117628 76118855 -90531441 + ORR1B1-int LTR MaLR 1 1041 -922 1 1165 1035 113 0 0 chrX 76118855 76118997 -90531299 + B1_Mus1 SINE Alu 2 143 -5 1 1165 207 0 0 0 chrX 76119000 76119023 -90531273 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1165 7003 186 84 82 chrX 76119023 76119807 -90530489 + ORR1B1-int LTR MaLR 954 1772 -191 1 1165 1023 48 7 13 chrX 76119807 76119956 -90530340 + L1_Mm LINE L1 5215 5362 -521 1 1165 30669 92 8 7 chrX 76119957 76126147 -90524149 - L1Md_F2 LINE L1 -8 6574 380 1 1165 784 177 106 35 chrX 76126148 76126365 -90523931 + ORR1B1-int LTR MaLR 1752 1963 0 1 1165 1801 184 19 33 chrX 76126372 76126731 -90523565 + ORR1B1 LTR MaLR 41 394 0 1 1165 387 0 0 0 chrX 76126957 76127000 -90523296 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1165 21 0 0 0 chrX 76127110 76127131 -90523165 + AT_rich Low_complexity Low_complexity 1 21 0 1 1165 1450 225 90 16 chrX 76127734 76128122 -90522174 - MTC LTR MaLR -4 417 1 1 1165 511 298 95 4 chrX 76128490 76128733 -90521563 + Lx7 LINE L1 6020 6284 -1412 1 1165 234 0 0 0 chrX 76128781 76128807 -90521489 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1 1165 310 312 0 0 chrX 76128816 76128909 -90521387 + Lx7 LINE L1 6537 6629 -1067 1 1165 1123 140 39 0 chrX 76128910 76129089 -90521207 - B2_Mm2 SINE B2 -9 186 1 1 1165 7471 55 9 0 chrX 76129114 76130693 -90519603 - L1Md_F2 LINE L1 -14 6568 4976 1 1165 201 39 0 0 chrX 76130707 76130733 -90519563 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1 1165 6010 87 1 1 chrX 76130733 76132319 -90517977 - L1Md_F2 LINE L1 -3910 1973 387 1 1165 261 287 0 78 chrX 76132322 76132424 -90517872 + Lx7 LINE L1 6619 6712 -984 1 1165 1093 92 0 0 chrX 76132635 76132776 -90517520 + B1_Mus1 SINE Alu 1 141 -7 1 1165 2558 80 225 27 chrX 76133008 76133483 -90516813 + RLTR6_Mm LTR ERV1 37 605 -49 1 1165 63708 14 15 9 chrX 76133483 76141216 -90509080 + RLTR6-int LTR ERV1 1 7778 0 1 1165 236 218 194 65 chrX 76141216 76141324 -90508972 + RLTR6_Mm LTR ERV1 1 122 -532 1 1165 2424 75 238 29 chrX 76141326 76141779 -90508517 + RLTR6_Mm LTR ERV1 37 584 -70 1 1165 1352 323 16 36 chrX 76142039 76142647 -90507649 + Lx7 LINE L1 6739 7334 -362 1 1165 445 258 0 0 chrX 76142660 76142780 -90507516 - Lx6 LINE L1 0 7460 7341 1 1165 25 65 0 0 chrX 76142943 76142989 -90507307 + AT_rich Low_complexity Low_complexity 1 46 0 1 1165 961 224 0 0 chrX 76143340 76143519 -90506777 - MTD LTR MaLR 0 419 241 1 1165 4502 176 45 12 chrX 76143905 76144802 -90505494 - Lx LINE L1 0 6654 5729 1 1165 4034 136 25 3 chrX 76144800 76145533 -90504763 - L1_Mus2 LINE L1 -1092 4791 4043 1 1165 18391 134 160 16 chrX 76145516 76150152 -90500144 - L1_Mus2 LINE L1 -504 6062 725 1 1165 403 248 16 8 chrX 76150162 76150288 -90500008 - L1_Mus2 LINE L1 -5815 801 675 1 1165 322 320 29 69 chrX 76150339 76150472 -90499824 - L1VL1 LINE L1 -5981 437 296 1 1165 335 73 18 0 chrX 76150472 76150527 -90499769 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 1 1165 322 283 22 126 chrX 76150527 76150640 -90499656 - L1VL1 LINE L1 -6106 316 227 1 1165 8700 171 73 13 chrX 76150641 76151109 -90499187 - L1_Mur1 LINE L1 -1419 4467 3980 1 1165 1060 104 0 0 chrX 76151109 76151253 -90499043 - B1_Mus1 SINE Alu -4 144 1 1 1165 369 0 0 0 chrX 76151253 76151294 -90499002 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1165 8700 171 73 13 chrX 76151294 76151771 -90498525 - L1_Mur1 LINE L1 -1907 3979 3482 1 1165 189 0 0 0 chrX 76151771 76151792 -90498504 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 1 1165 8700 171 73 13 chrX 76151792 76152825 -90497471 - L1_Mur1 LINE L1 -2405 3481 2370 1 1166 532 238 62 14 chrX 76153865 76154010 -90496286 + MER5A1 DNA MER1_type 15 166 0 1 1166 29 47 0 0 chrX 76154026 76154069 -90496227 + AT_rich Low_complexity Low_complexity 1 43 0 1 1166 608 378 75 6 chrX 76154185 76154544 -90495752 - LTR68 LTR ERV1 -88 652 269 1 1166 617 260 113 59 chrX 76154579 76154751 -90495545 - B3 SINE B2 0 216 36 1 1166 2305 144 75 68 chrX 76154751 76155308 -90494988 + RLTR31_Mm LTR ERVK 1 561 0 1 1166 617 260 113 59 chrX 76155308 76155339 -90494957 - B3 SINE B2 -181 35 2 1 1166 365 265 174 48 chrX 76155322 76155342 -90494954 - LTR68 LTR ERV1 -481 259 242 1 1166 967 110 13 0 chrX 76155342 76155497 -90494799 + L1_Mus3 LINE L1 6480 6636 -2 1 1166 365 265 174 48 chrX 76155497 76155706 -90494590 - LTR68 LTR ERV1 -499 241 2 1 1166 744 328 47 54 chrX 76155819 76156247 -90494049 - MER110 LTR ERV1 -46 445 21 1 1166 279 0 0 0 chrX 76156264 76156295 -90494001 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1166 549 0 0 0 chrX 76156295 76156355 -90493941 + (GA)n Simple_repeat Simple_repeat 2 62 0 1 1166 525 316 111 69 chrX 76157141 76157747 -90492549 - Charlie7 DNA MER1_type -267 2345 1715 1 1166 268 326 122 7 chrX 76158025 76158173 -90492123 - Charlie7 DNA MER1_type -2389 223 59 1 1166 3742 85 4 0 chrX 76158609 76159105 -90491191 - L1_Mus1 LINE L1 0 6567 6070 1 1166 297 252 99 72 chrX 76159182 76159293 -90491003 - MER5A1 DNA MER1_type -9 157 44 1 1166 31 26 0 0 chrX 76159399 76159437 -90490859 + AT_rich Low_complexity Low_complexity 1 38 0 1 1166 2373 248 101 32 chrX 76159504 76160275 -90490021 - Lx7 LINE L1 0 7696 6873 1 1166 299 284 32 121 chrX 76160698 76160822 -90489474 - RLTR25B LTR ERVK -905 123 11 1 1166 1162 146 4 40 chrX 76160823 76161073 -90489223 - L1_Mur2 LINE L1 -2291 3586 3346 1 1166 1099 131 79 92 chrX 76161074 76161301 -90488995 - ORR1B1 LTR MaLR -170 224 1 1 1166 3039 252 65 27 chrX 76161301 76162433 -90487863 + L1_Mur3 LINE L1 4321 5494 -386 1 1166 244 358 0 0 chrX 76162450 76162545 -90487751 + Lx7 LINE L1 7213 7307 -389 1 1166 238 357 33 14 chrX 76162802 76163015 -90487281 + L1_Mur3 LINE L1 72 288 -7440 1 1166 369 276 26 7 chrX 76163042 76163195 -90487101 + L1_Mur3 LINE L1 861 1016 -6712 1 1166 25038 103 4 8 chrX 76163201 76168503 -90481793 + L1Md_F2 LINE L1 307 5585 -298 1 1166 7149 90 18 0 chrX 76168504 76169482 -90480814 + L1Md_F2 LINE L1 5587 6582 0 1 1166 322 275 0 0 chrX 76169483 76169563 -90480733 + L1_Mur3 LINE L1 1017 1096 -6632 1 1166 2862 151 8 65 chrX 76169550 76170137 -90480159 + L1_Mur3 LINE L1 4477 5030 -847 1 1166 508 228 23 29 chrX 76170116 76170266 -90480030 + Lx3C LINE L1 6837 7007 -2 1 1166 1450 11 6 17 chrX 76170294 76170475 -90479821 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 1 1166 1168 318 13 9 chrX 76170484 76170992 -90479304 - RCHARR1 DNA MER1_type -404 570 7 1 1166 3986 152 10 7 chrX 76170993 76171690 -90478606 - Lx LINE L1 -287 5596 4898 1 1166 7033 95 22 12 chrX 76171687 76172699 -90477597 + Lx LINE L1 5633 6654 0 1 1166 324 155 0 0 chrX 76173121 76173192 -90477104 + CT-rich Low_complexity Low_complexity 2 72 0 1 1166 239 247 23 69 chrX 76173193 76173280 -90477016 - ID4_ SINE ID 0 83 1 1 1166 372 231 83 21 chrX 76173783 76173926 -90476370 - L1MA6 LINE L1 -177 6120 5966 1 1166 1352 306 57 20 chrX 76173920 76174481 -90475815 - Lx8 LINE L1 0 7473 6892 1 1166 304 398 11 26 chrX 76174806 76174997 -90475299 + Lx8 LINE L1 6785 6972 -501 1 1166 2971 199 63 27 chrX 76175007 76175641 -90474655 + RMER13B LTR ERVK 197 853 -55 1 1166 3328 126 83 41 chrX 76175642 76176223 -90474073 + RLTR1D LTR ERV1 1 605 0 1 1166 556 219 40 14 chrX 76176274 76176422 -90473874 + Lx4B LINE L1 6897 7048 -10 1 1166 28 0 0 0 chrX 76176423 76176451 -90473845 + AT_rich Low_complexity Low_complexity 1 28 0 1 1166 995 97 0 0 chrX 76176453 76176587 -90473709 + B1_Mus2 SINE Alu 2 135 -12 2 1166 267 31 0 0 chrX 76176587 76176619 -90473677 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2 1166 1479 216 105 16 chrX 76177354 76177726 -90472570 - Lx4B LINE L1 -1 7057 6653 2 1166 3331 149 14 12 chrX 76177727 76178406 -90471890 - Lx4B LINE L1 -1136 5922 5237 2 1166 429 145 0 0 chrX 76178411 76178487 -90471809 + (TTTTC)n Simple_repeat Simple_repeat 4 79 0 2 1166 24 0 0 0 chrX 76178555 76178579 -90471717 + AT_rich Low_complexity Low_complexity 1 24 0 2 1166 406 338 20 7 chrX 76178981 76179130 -90471166 - Lx6 LINE L1 -26 7434 7284 2 1166 23 54 0 0 chrX 76179137 76179174 -90471122 + AT_rich Low_complexity Low_complexity 1 37 0 2 1166 498 255 148 5 chrX 76179174 76179330 -90470966 - RLTR40 LTR ERVK -344 473 291 2 1166 3516 177 25 99 chrX 76179330 76179667 -90470629 - RMER17D LTR ERVK 0 889 567 2 1166 918 92 7 34 chrX 76179667 76179814 -90470482 + L1_Mus2 LINE L1 6423 6565 -1 2 1166 3516 177 25 99 chrX 76179814 76180436 -90469860 - RMER17D LTR ERVK -323 566 1 2 1166 1050 230 29 43 chrX 76180467 76180748 -90469548 - RLTR40 LTR ERVK -538 279 3 2 1166 329 291 72 60 chrX 76180855 76181104 -90469192 - L1M4c LINE L1 -4578 2055 1682 2 1166 27 0 0 0 chrX 76181518 76181545 -90468751 + AT_rich Low_complexity Low_complexity 1 27 0 2 1166 1065 201 52 28 chrX 76181560 76181847 -90468449 - Lx9 LINE L1 -2 7642 7349 2 1166 219 378 70 0 chrX 76182858 76183014 -90467282 - MIRb SINE MIR -39 229 63 2 1166 4410 12 2 0 chrX 76183537 76184029 -90466267 - MT2_Mm LTR ERVL 0 493 1 2 1166 314 0 0 0 chrX 76184029 76184067 -90466229 - MERVL-int LTR ERVL 0 5485 5448 2 1166 392 167 46 35 chrX 76184067 76184154 -90466142 - ORR1A3-int LTR MaLR -1323 640 553 2 1166 40393 17 14 0 chrX 76184154 76189442 -90460854 - MERVL-int LTR ERVL -125 5360 1 2 1166 4410 12 2 0 chrX 76189442 76189934 -90460362 - MT2_Mm LTR ERVL 0 493 1 2 1166 231 61 0 0 chrX 76190531 76190564 -90459732 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1166 2537 107 28 8 chrX 76190669 76191063 -90459233 + RLTR9D LTR ERVK 1 402 -1 2 1166 945 257 57 65 chrX 76191066 76191453 -90458843 + ETnERV2-int LTR ERVK 3 386 -2928 2 1166 5480 148 58 30 chrX 76191468 76191925 -90458371 + ETnERV2-int LTR ERVK 850 1555 -5851 2 1166 4385 18 0 0 chrX 76191925 76192418 -90457878 + MT2_Mm LTR ERVL 1 493 0 2 1166 13561 232 55 59 chrX 76192418 76193074 -90457222 + ETnERV2-int LTR ERVK 2496 2597 -4809 2 1166 3113 63 43 108 chrX 76193074 76193590 -90456706 + RLTR45 LTR ERVK 1 482 0 2 1166 13561 127 29 9 chrX 76193590 76193764 -90456532 + ETnERV2-int LTR ERVK 2598 2772 -4634 2 1166 324 48 0 0 chrX 76193764 76193806 -90456490 + (TTG)n Simple_repeat Simple_repeat 2 43 0 2 1166 13561 127 29 9 chrX 76193806 76195704 -90454592 + ETnERV2-int LTR ERVK 2773 4711 -2695 2 1166 3046 98 5 2 chrX 76195694 76196112 -90454184 + ETnERV2-int LTR ERVK 5100 5518 -1888 2 1166 2426 120 15 13 chrX 76196112 76196509 -90453787 + RLTR9E LTR ERVK 1 398 -11 2 1166 848 238 150 59 chrX 76196519 76196859 -90453437 + ETnERV2-int LTR ERVK 17 387 -2927 2 1166 5410 150 61 36 chrX 76196869 76197944 -90452352 + ETnERV2-int LTR ERVK 1071 2172 -5234 2 1166 6102 144 34 42 chrX 76197942 76198467 -90451829 + ETnERV2-int LTR ERVK 2278 2777 -4629 2 1166 261 0 0 0 chrX 76198467 76198496 -90451800 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1166 6102 144 34 42 chrX 76198496 76199150 -90451146 + ETnERV2-int LTR ERVK 2778 3447 -3959 2 1166 3113 137 47 4 chrX 76199460 76200010 -90450286 + ETnERV2-int LTR ERVK 3441 4014 -3392 2 1166 1279 107 0 0 chrX 76200008 76200177 -90450119 + ETnERV2-int LTR ERVK 4919 5087 -2319 2 1166 4715 120 18 3 chrX 76200171 76200847 -90449449 + ETnERV2-int LTR ERVK 3946 4631 -2775 2 1166 7290 110 8 16 chrX 76200840 76202034 -90448262 + ETnERV2-int LTR ERVK 5280 6227 -1179 2 1166 492 101 0 12 chrX 76202239 76202319 -90447977 + ETnERV2-int LTR ERVK 7327 7405 -1 2 1166 2457 124 23 10 chrX 76202319 76202717 -90447579 + RLTR9D LTR ERVK 1 403 0 2 1166 22 0 0 0 chrX 76203508 76203530 -90446766 + AT_rich Low_complexity Low_complexity 1 22 0 2 1166 731 260 69 54 chrX 76203824 76204357 -90445939 - L1M2 LINE L1 -2632 3511 2971 2 1166 738 275 103 48 chrX 76204373 76204644 -90445652 - B4A SINE B4 0 292 7 2 1166 239 218 102 11 chrX 76204657 76204745 -90445551 - L1MD LINE L1 -3178 2968 2873 2 1166 500 272 62 47 chrX 76204742 76204971 -90445325 + L1MA5A LINE L1 5541 5775 -525 2 1166 450 0 0 0 chrX 76204971 76205021 -90445275 + (ATGTG)n Simple_repeat Simple_repeat 1 50 0 2 1166 500 272 62 47 chrX 76205021 76205049 -90445247 + L1MA5A LINE L1 5776 5801 -499 2 1166 364 299 32 19 chrX 76205074 76205231 -90445065 + L1MA5A LINE L1 5782 5940 -357 2 1166 23 33 0 0 chrX 76205380 76205410 -90444886 + AT_rich Low_complexity Low_complexity 1 30 0 2 1166 6181 153 6 14 chrX 76206398 76207822 -90442474 + Lx LINE L1 5253 6654 0 2 1166 1030 182 10 15 chrX 76208214 76208409 -90441887 - ORR1B2 LTR MaLR -15 352 159 2 1166 3917 241 92 47 chrX 76208406 76209694 -90440602 + RMER12 LTR ERVK 8 1818 -30 2 1166 584 138 28 0 chrX 76209722 76209831 -90440465 + GA-rich Low_complexity Low_complexity 4 115 0 2 1166 852 202 11 48 chrX 76209833 76210020 -90440276 - ORR1B2 LTR MaLR -198 180 1 2 1166 2010 334 65 36 chrX 76210621 76211721 -90438575 - Lx8 LINE L1 -5 7468 6338 2 1166 502 241 32 177 chrX 76211779 76212056 -90438240 + Lx8 LINE L1 6087 6323 -1150 2 1166 2405 82 0 90 chrX 76212328 76212704 -90437592 + ORR1A1 LTR MaLR 1 342 -4 2 1166 495 423 65 49 chrX 76213262 76213772 -90436524 - MER115 DNA Tip100 -16 677 160 2 1166 456 354 74 9 chrX 76213803 76214020 -90436276 - MLT2B5 LTR ERVL -359 358 128 2 1166 2111 183 18 37 chrX 76214353 76214789 -90435507 + RLTR11A2 LTR ERVK 100 527 0 2 1166 392 377 133 26 chrX 76214879 76215310 -90434986 - MLT1E3 LTR MaLR -14 613 137 2 1166 432 0 0 0 chrX 76215372 76215420 -90434876 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1166 543 352 66 16 chrX 76215491 76215748 -90434548 + LTR40b LTR ERVL 193 462 0 2 1166 597 28 0 0 chrX 76216474 76216545 -90433751 + (GA)n Simple_repeat Simple_repeat 1 71 0 2 1166 309 314 14 54 chrX 76217287 76217435 -90432861 + B1F SINE Alu 2 143 -6 2 1166 210 37 0 0 chrX 76217436 76217463 -90432833 + (CAAAC)n Simple_repeat Simple_repeat 3 29 0 2 1166 524 355 77 56 chrX 76218034 76218425 -90431871 + MLT1D LTR MaLR 57 455 -50 2 1166 598 288 88 68 chrX 76218421 76218626 -90431670 - B3 SINE B2 0 216 8 2 1166 209 157 0 38 chrX 76218642 76218695 -90431601 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 2 1166 3420 25 5 0 chrX 76218703 76219097 -90431199 - MTA_Mm LTR MaLR 0 396 1 2 1166 6000 89 5 22 chrX 76219677 76220547 -90429749 - RLTR13A LTR ERVK 0 855 1 2 1166 32418 75 3 1 chrX 76220623 76225695 -90424601 + L1Md_F2 LINE L1 483 5585 -298 2 1166 7584 61 9 1 chrX 76225696 76226684 -90423612 + L1Md_F2 LINE L1 5587 6582 0 2 1166 2890 118 2 0 chrX 76227580 76228031 -90422265 + MusHAL1 LINE L1 1767 2218 -494 2 1166 331 316 97 53 chrX 76228031 76228238 -90422058 - RMER12 LTR ERVK 0 1322 1107 2 1166 4055 89 15 10 chrX 76228475 76229067 -90421229 - RLTR22_Mus LTR ERVK -989 819 225 2 1166 1516 137 12 0 chrX 76229067 76229315 -90420981 + L1_Mus4 LINE L1 4399 4649 -1234 2 1166 2809 78 34 3 chrX 76229315 76229699 -90420597 - MTA_Mm LTR MaLR 0 396 1 2 1166 4643 58 5 13 chrX 76229730 76230341 -90419955 - L1Md_F2 LINE L1 0 6582 5977 2 1166 2594 30 0 0 chrX 76230354 76230656 -90419640 + L1Md_F2 LINE L1 5587 5888 -694 2 1166 7822 79 9 5 chrX 76230656 76231747 -90418549 - MTA_Mm-int LTR MaLR -2 1096 1 2 1166 3080 63 5 2 chrX 76231747 76232142 -90418154 - MTA_Mm LTR MaLR 0 396 1 2 1166 6207 177 32 6 chrX 76232142 76232266 -90418030 + L1_Mus4 LINE L1 4645 4772 -1111 2 1166 435 19 0 0 chrX 76232266 76232318 -90417978 + (AATAG)n Simple_repeat Simple_repeat 4 55 0 2 1166 6207 153 27 6 chrX 76232318 76233430 -90416866 + L1_Mus4 LINE L1 4773 5912 -724 2 1166 181 30 0 83 chrX 76233974 76234010 -90416286 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 2 1166 189 94 0 0 chrX 76234016 76234048 -90416248 + (CCA)n Simple_repeat Simple_repeat 1 32 0 2 1166 1964 126 57 0 chrX 76234849 76235150 -90415146 + ORR1A2 LTR MaLR 1 318 -9 2 1166 520 241 36 7 chrX 76235212 76235350 -90414946 - MLT2B1 LTR ERVL -300 220 79 2 1166 234 0 0 0 chrX 76235473 76235499 -90414797 + (TTTTG)n Simple_repeat Simple_repeat 4 29 0 2 1166 220 259 69 0 chrX 76235518 76235576 -90414720 - ID4_ SINE ID -21 62 1 2 1166 272 331 77 0 chrX 76235583 76235713 -90414583 - B1F2 SINE Alu -5 144 5 2 1166 4886 65 11 0 chrX 76236196 76236828 -90413468 + L1Md_F2 LINE L1 5944 6582 0 2 1166 459 285 183 27 chrX 76237648 76237976 -90412320 - MER31A LTR ERV1 -83 402 24 2 1166 235 423 44 13 chrX 76237980 76238138 -90412158 - LTR16C LTR ERVL -218 271 109 2 1166 3087 137 16 58 chrX 76239461 76240018 -90410278 - Lx2 LINE L1 -7 6990 6457 2 1166 252 0 0 0 chrX 76240969 76240997 -90409299 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 1166 483 18 0 0 chrX 76240997 76241053 -90409243 + (CCA)n Simple_repeat Simple_repeat 1 56 0 2 1166 192 185 0 0 chrX 76241638 76241692 -90408604 + T-rich Low_complexity Low_complexity 1 54 0 2 1166 731 118 18 0 chrX 76241693 76241803 -90408493 - B1_Mus1 SINE Alu 0 148 37 2 1166 1946 225 37 22 chrX 76241935 76242194 -90408102 - MT2A LTR ERVL -72 461 192 2 1166 210 37 0 0 chrX 76242194 76242221 -90408075 + (CAA)n Simple_repeat Simple_repeat 1 27 0 2 1166 1946 225 37 22 chrX 76242221 76242415 -90407881 - MT2A LTR ERVL -342 191 1 2 1166 1351 241 25 0 chrX 76244189 76244471 -90405825 - Lx5 LINE L1 -1 7049 6761 2 1166 1238 172 11 0 chrX 76244488 76244750 -90405546 + L1_Mur2 LINE L1 1415 1679 -4198 2 1166 2939 238 24 3 chrX 76244822 76245564 -90404732 - Lx5 LINE L1 -203 6773 5971 2 1166 6560 108 13 6 chrX 76245565 76246566 -90403730 + Lx3_Mus LINE L1 6002 7009 0 2 1166 16664 175 164 9 chrX 76246580 76250371 -90399925 + Lx4B LINE L1 1286 5660 -1398 2 1166 235 337 0 11 chrX 76251393 76251480 -90398816 - MER102a DNA MER1_type -168 162 77 2 1166 245 109 22 0 chrX 76251639 76251685 -90398611 + (TCTCCC)n Simple_repeat Simple_repeat 3 49 0 2 1166 309 265 35 24 chrX 76252307 76252392 -90397904 + RMER13B LTR ERVK 823 908 0 2 1166 432 301 13 20 chrX 76252958 76253107 -90397189 - B1_Mur2 SINE Alu 0 149 2 2 1166 942 88 0 1 chrX 76253394 76253539 -90396757 + B1_Mus2 SINE Alu 5 148 0 2 1166 447 106 0 0 chrX 76253539 76253605 -90396691 + (GAAA)n Simple_repeat Simple_repeat 3 68 0 2 1166 228 272 114 0 chrX 76254368 76254482 -90395814 - L1M4 LINE L1 -265 5909 5783 2 1166 235 293 62 42 chrX 76254548 76254644 -90395652 + B4 SINE B4 121 218 -74 2 1166 430 117 165 25 chrX 76254574 76254653 -90395643 + B1_Mur3 SINE Alu 59 148 -1 2 1166 1222 335 136 10 chrX 76254701 76255400 -90394896 - Lx8 LINE L1 -2 7471 6685 2 1166 762 222 190 9 chrX 76255418 76255650 -90394646 - MTD LTR MaLR -14 405 132 2 1166 355 268 12 12 chrX 76255635 76255718 -90394578 - RMER13B LTR ERVK -9 899 817 2 1166 656 265 4 46 chrX 76255825 76256086 -90394210 - L1_Mur3 LINE L1 -1340 4540 4291 2 1166 1671 153 10 0 chrX 76256117 76256411 -90393885 - Lx2 LINE L1 0 6997 6701 2 1166 424 149 0 0 chrX 76256415 76256482 -90393814 + Lx LINE L1 6283 6349 -305 2 1166 290 261 63 35 chrX 76256509 76256652 -90393644 - L1_Mur1 LINE L1 -1650 4236 4090 2 1166 1134 276 47 43 chrX 76256653 76257274 -90393022 - L1_Mur3 LINE L1 -2055 3825 3203 2 1166 1353 184 21 79 chrX 76257285 76257758 -90392538 + RLTR9F LTR ERVK 1 416 -21 2 1166 227 226 0 0 chrX 76257758 76257811 -90392485 - L1M2 LINE L1 -2912 3231 3179 3 1166 301 209 0 29 chrX 76257814 76257883 -90392413 - L1_Mur3 LINE L1 -7352 376 310 2 1166 1933 215 136 15 chrX 76257885 76257952 -90392344 - L1_Mur3 LINE L1 -88 5792 5729 3 1166 252 0 0 0 chrX 76257952 76257980 -90392316 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 3 1166 1933 215 136 15 chrX 76257980 76258508 -90391788 - L1_Mur3 LINE L1 -152 5728 5127 3 1166 231 36 0 0 chrX 76258795 76258823 -90391473 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 1166 976 117 0 16 chrX 76258823 76259005 -90391291 + (GA)n Simple_repeat Simple_repeat 1 180 0 3 1166 1803 142 32 73 chrX 76259055 76259396 -90390900 + ORR1A2 LTR MaLR 1 327 0 3 1166 549 276 47 0 chrX 76260214 76260341 -90389955 + ETnERV2-int LTR ERVK 7070 7202 -204 3 1166 399 268 8 16 chrX 76260891 76261016 -90389280 + RMER16-int LTR ERVK 181 304 -6940 3 1166 1945 161 120 26 chrX 76261229 76261746 -90388550 + RMER16-int LTR ERVK 192 671 -4735 3 1166 477 167 139 0 chrX 76261749 76261857 -90388439 + RMER16-int LTR ERVK 938 1060 -5077 3 1166 1110 235 62 24 chrX 76261871 76262159 -90388137 + ETnERV2-int LTR ERVK 2455 2753 -4653 3 1166 3253 136 24 0 chrX 76262205 76262704 -90387592 + ETnERV2-int LTR ERVK 3761 4271 -3135 3 1166 538 179 9 35 chrX 76262708 76262824 -90387472 + MMETn-int LTR ERVK 2356 2468 -2376 3 1166 603 179 178 6 chrX 76262831 76263000 -90387296 + ETnERV2-int LTR ERVK 5034 5231 -2013 3 1166 207 224 46 9 chrX 76263026 76263134 -90387162 + (TATAA)n Simple_repeat Simple_repeat 3 114 0 3 1166 251 44 176 0 chrX 76263052 76263120 -90387176 + (CAAAT)n Simple_repeat Simple_repeat 4 83 0 3 1166 4584 164 71 10 chrX 76263144 76264059 -90386237 + ETnERV3-int LTR ERVK 3702 5388 -420 3 1166 786 291 14 47 chrX 76264048 76264412 -90385884 + ETnERV3-int LTR ERVK 7506 7828 -389 3 1166 4042 172 41 4 chrX 76264437 76265122 -90385174 + ETnERV2-int LTR ERVK 6493 7202 -204 3 1166 286 272 60 17 chrX 76265740 76265856 -90384440 - L1MB1 LINE L1 -1 6167 6047 3 1166 693 243 60 9 chrX 76265884 76266136 -90384160 - ORR1C1 LTR MaLR -1 377 2 3 1166 377 279 0 23 chrX 76267533 76267621 -90382675 + RLTR20D LTR ERVK 483 568 0 3 1166 603 242 132 8 chrX 76267621 76267863 -90382433 + Lx9 LINE L1 7371 7642 -2 3 1166 342 349 68 72 chrX 76267875 76268391 -90381905 + L1M5 LINE L1 4507 5020 -1126 3 1166 327 294 31 6 chrX 76268603 76268764 -90381532 + L1M5 LINE L1 5237 5401 -745 3 1166 241 326 110 7 chrX 76268813 76268949 -90381347 + L1M5 LINE L1 5458 5607 -633 3 1166 1818 186 18 15 chrX 76269118 76269456 -90380840 - MTC LTR MaLR -8 413 75 3 1166 426 200 59 0 chrX 76269456 76269541 -90380755 + MTC LTR MaLR 1 90 -331 3 1166 966 180 23 6 chrX 76269547 76269720 -90380576 + MTC LTR MaLR 246 421 0 3 1166 353 260 0 0 chrX 76269720 76269797 -90380499 - MTC LTR MaLR -342 79 3 3 1166 278 298 9 9 chrX 76269902 76270017 -90380279 + Lx2B LINE L1 6869 6983 -17 3 1166 288 0 0 0 chrX 76270101 76270133 -90380163 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 3 1166 691 293 80 3 chrX 76272112 76272413 -90377883 + L1MB2 LINE L1 5728 6051 -120 3 1166 238 53 33 50 chrX 76272461 76272521 -90377775 + (TTTTG)n Simple_repeat Simple_repeat 1 59 0 3 1166 1097 103 0 0 chrX 76272524 76272670 -90377626 - B1_Mus2 SINE Alu 0 147 2 3 1166 1212 224 49 43 chrX 76273808 76274135 -90376161 + ORR1D1 LTR MaLR 27 355 -19 3 1166 680 265 44 154 chrX 76274218 76274565 -90375731 - RLTR21 LTR ERVK 0 1572 1189 3 1166 486 120 0 0 chrX 76274565 76274640 -90375656 + (TA)n Simple_repeat Simple_repeat 2 76 0 3 1166 1318 94 20 5 chrX 76274640 76274844 -90375452 - RMER12 LTR ERVK -553 769 563 3 1166 14827 17 0 0 chrX 76276665 76278455 -90371841 + L1Md_T LINE L1 3797 5586 -297 3 1166 8031 56 0 0 chrX 76278455 76279451 -90370845 + L1Md_T LINE L1 5587 6582 0 3 1166 7821 35 0 5 chrX 76279453 76280389 -90369907 + L1Md_F3 LINE L1 5642 6572 -12 3 1166 3514 50 0 0 chrX 76280393 76280817 -90369479 + L1_Mus1 LINE L1 6144 6567 0 3 1166 21 0 0 0 chrX 76280818 76280839 -90369457 + AT_rich Low_complexity Low_complexity 1 21 0 3 1166 3758 121 10 10 chrX 76280839 76281418 -90368878 - RMER12 LTR ERVK -743 579 1 3 1166 2471 158 97 8 chrX 76281445 76281749 -90368547 - RLTR11A2 LTR ERVK 0 527 196 3 1166 660 26 0 0 chrX 76281749 76281827 -90368469 + (GAAAA)n Simple_repeat Simple_repeat 3 80 0 3 1166 2471 158 97 8 chrX 76281827 76282006 -90368290 - RLTR11A2 LTR ERVK -332 195 1 3 1166 182 306 148 34 chrX 76282025 76282113 -90368183 + MER5B DNA MER1_type 75 172 -6 3 1166 254 29 29 0 chrX 76282153 76282188 -90368108 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 1166 234 244 24 49 chrX 76282522 76282604 -90367692 + MER34 LTR ERV1 384 463 -79 3 1166 670 273 63 37 chrX 76282610 76282800 -90367496 - B3A SINE B2 -10 206 12 3 1166 580 262 215 13 chrX 76283368 76283596 -90366700 - Lx6 LINE L1 -210 7250 6977 3 145 4232 144 22 113 chrX 76283601 76284541 -90365755 + RLTR13D6 LTR ERVK 48 902 0 3 1167 6966 142 25 14 chrX 76284570 76285854 -90364442 - L1_Mur2 LINE L1 -1206 4671 3374 3 1167 1547 177 95 38 chrX 76285857 76286489 -90363807 + RMER3D-int LTR ERVK 1541 2208 -634 3 1167 853 216 56 7 chrX 76286491 76286731 -90363565 - L1_Mur2 LINE L1 -6292 794 472 3 1167 990 192 41 45 chrX 76286742 76287009 -90363287 - L1_Mur3 LINE L1 -890 4990 4725 3 1167 1175 265 150 38 chrX 76287438 76288022 -90362274 + MTC-int LTR MaLR 639 1258 0 3 1167 394 261 43 36 chrX 76288160 76288299 -90361997 - MTC-int LTR MaLR -807 451 312 3 1167 243 219 0 88 chrX 76288330 76288410 -90361886 - Lx7 LINE L1 -4 7692 7620 3 1167 544 260 58 96 chrX 76288451 76288711 -90361585 - MTC-int LTR MaLR -1008 250 1 3 1167 291 28 0 0 chrX 76288773 76288809 -90361487 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 1167 757 332 42 27 chrX 76288839 76289099 -90361197 - MTD LTR MaLR -143 276 13 3 1167 223 343 0 0 chrX 76289371 76289441 -90360855 - ID4_ SINE ID 0 83 14 3 1167 333 0 0 0 chrX 76289590 76289627 -90360669 + (GA)n Simple_repeat Simple_repeat 2 38 0 3 1167 369 296 68 88 chrX 76289627 76289913 -90360383 - B4A SINE B4 -8 284 3 3 1167 216 270 143 0 chrX 76289957 76290020 -90360276 - BC1_Mm scRNA scRNA -72 80 9 3 1167 335 287 106 118 chrX 76291014 76291075 -90359221 + MER67B LTR ERV1 60 117 -544 3 1167 1007 110 13 27 chrX 76291075 76291225 -90359071 + B1_Mus1 SINE Alu 1 148 0 3 1167 922 130 6 6 chrX 76291229 76291407 -90358889 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 3 1167 335 287 106 118 chrX 76291407 76291570 -90358726 + MER67B LTR ERV1 118 285 -376 3 1167 1983 71 7 4 chrX 76291570 76291840 -90358456 + L1_Mus3 LINE L1 6362 6632 -6 3 1167 538 161 7 5 chrX 76292100 76292224 -90358072 + L1_Rod LINE L1 2910 3043 -2804 3 1167 232 45 43 43 chrX 76292235 76292281 -90358015 + (CAAA)n Simple_repeat Simple_repeat 1 46 0 3 1167 1582 103 11 0 chrX 76292281 76292552 -90357744 + L1_Rod LINE L1 2994 3267 -647 3 1167 417 20 0 0 chrX 76292934 76292984 -90357312 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1167 1137 249 119 26 chrX 76293087 76293475 -90356821 - Lx6 LINE L1 -2 7458 7035 3 1167 1811 135 43 3 chrX 76293477 76293759 -90356537 - RLTR14 LTR ERV1 -87 295 3 3 1167 181 341 43 32 chrX 76293819 76293913 -90356383 - MER5A DNA MER1_type -61 128 34 3 1167 204 67 0 0 chrX 76293927 76293957 -90356339 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1167 27015 101 12 67 chrX 76294745 76296452 -90353844 + L1Md_F2 LINE L1 136 1837 -4046 3 1167 1915 148 3 10 chrX 76296452 76296760 -90353536 + RLTR10E LTR ERVK 1 306 -5 3 1167 27015 101 12 67 chrX 76296760 76300517 -90349779 + L1Md_F2 LINE L1 1838 5586 -297 3 1167 7942 48 5 2 chrX 76300518 76301509 -90348787 + L1Md_F2 LINE L1 5588 6581 -1 3 1167 9034 87 1 2 chrX 76301511 76302818 -90347478 + L1Md_F2 LINE L1 4280 5585 -298 3 1167 6736 82 42 18 chrX 76302819 76303780 -90346516 + L1Md_F2 LINE L1 5587 6570 -12 3 1167 3788 216 49 48 chrX 76304441 76304993 -90345303 + L1_Rod LINE L1 1442 1962 -3885 3 1167 348 24 0 0 chrX 76304993 76305034 -90345262 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1167 3788 216 49 48 chrX 76305034 76305655 -90344641 + L1_Rod LINE L1 1963 2616 -3231 3 1167 630 131 0 0 chrX 76305659 76305758 -90344538 + Lx4B LINE L1 217 315 -6323 3 1167 11971 121 49 13 chrX 76305754 76306955 -90343341 + Lx4B LINE L1 639 2068 -3812 3 1167 5850 64 48 8 chrX 76306955 76307732 -90342564 - RLTR13C2 LTR ERVK 0 808 1 3 1167 13568 178 16 29 chrX 76307732 76310307 -90339989 + Lx4B LINE L1 2069 4626 -1254 3 1167 6526 161 34 13 chrX 76310307 76311509 -90338787 + Lx2 LINE L1 5771 6997 0 3 1167 13568 178 14 29 chrX 76311509 76311988 -90338308 + Lx4B LINE L1 4625 5103 -774 3 1167 2764 101 14 9 chrX 76311988 76312407 -90337889 + BGLII LTR ERVK 1 421 0 3 1167 13568 178 14 29 chrX 76312407 76312467 -90337829 + Lx4B LINE L1 5104 5163 -714 3 1167 2243 116 219 26 chrX 76312477 76312938 -90337358 - RLTR6_Mm LTR ERV1 -68 586 37 3 1167 230 218 196 56 chrX 76312940 76313047 -90337249 - RLTR6_Mm LTR ERV1 -532 122 1 3 1167 64327 14 13 1 chrX 76313047 76320737 -90329559 - RLTR6-int LTR ERV1 0 7778 1 3 1167 2345 122 210 27 chrX 76320737 76321218 -90329078 - RLTR6_Mm LTR ERV1 -49 605 37 3 1167 6498 181 29 29 chrX 76321327 76323200 -90327096 + Lx4B LINE L1 5171 7052 -6 3 1167 1121 266 69 12 chrX 76323338 76323684 -90326612 + ORR1D2 LTR MaLR 1 366 -4 3 1167 216 158 0 0 chrX 76323701 76323739 -90326557 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 1167 794 278 182 31 chrX 76324399 76324728 -90325568 + MTD LTR MaLR 10 419 0 3 1167 290 26 26 0 chrX 76325288 76325327 -90324969 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 1167 33 25 0 0 chrX 76325426 76325466 -90324830 + AT_rich Low_complexity Low_complexity 1 40 0 3 1167 1042 330 78 69 chrX 76325469 76326074 -90324222 - MER92B LTR ERV1 -26 610 1 3 1167 265 280 25 51 chrX 76326646 76326725 -90323571 - ID4_ SINE ID -1 82 6 3 1167 339 127 0 0 chrX 76327072 76327135 -90323161 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 1167 222 302 0 0 chrX 76327399 76327452 -90322844 - MIR SINE MIR -179 83 31 3 1167 341 373 25 74 chrX 76327536 76327860 -90322436 + RLTR25B LTR ERVK 5 312 -716 3 1167 459 0 0 0 chrX 76328887 76328938 -90321358 + (TC)n Simple_repeat Simple_repeat 1 51 0 3 1167 11633 101 8 9 chrX 76330270 76332783 -90317513 - L1_Mus1 LINE L1 -2 6565 4049 3 1167 312 388 0 0 chrX 76332783 76332899 -90317397 + MER5B DNA MER1_type 63 178 0 3 1167 489 211 53 77 chrX 76333071 76333230 -90317066 - ORR1D2 LTR MaLR 0 379 220 3 1167 1049 101 0 26 chrX 76333676 76333828 -90316468 + B1_Mus1 SINE Alu 1 148 0 3 1167 238 225 0 0 chrX 76334463 76334503 -90315793 - MIR SINE MIR -100 108 69 3 1167 1509 175 76 25 chrX 76334767 76335084 -90315212 - Lx2B LINE L1 0 7000 6668 3 1167 2270 263 36 3 chrX 76335223 76335800 -90314496 - Lx7 LINE L1 -450 7246 6651 3 1167 5361 205 83 8 chrX 76335845 76337170 -90313126 - L1_Mur2 LINE L1 -747 5130 3707 3 1167 4784 108 32 12 chrX 76337190 76337253 -90313043 - L1_Mus3 LINE L1 -5 6633 6571 3 1167 279 0 0 0 chrX 76337253 76337284 -90313012 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 3 1167 4784 108 32 12 chrX 76337284 76337963 -90312333 - L1_Mus3 LINE L1 -68 6570 5876 3 1167 2599 26 2 248 chrX 76337963 76338480 -90311816 + RLTR10 LTR ERVK 1 390 0 3 1167 11620 36 27 32 chrX 76338490 76339745 -90310551 + RLTR10-int LTR ERVK 41 1346 -641 3 1167 185 0 40 0 chrX 76339745 76339770 -90310526 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 1167 11620 32 36 39 chrX 76339770 76340389 -90309907 + RLTR10-int LTR ERVK 1347 1983 -4 3 1167 2541 23 2 269 chrX 76340391 76340923 -90309373 + RLTR10 LTR ERVK 1 390 0 3 1167 2275 72 0 0 chrX 76340923 76341258 -90309038 - L1_Mus3 LINE L1 -2 5881 5547 3 1167 3052 153 39 18 chrX 76341253 76341819 -90308477 + L1_Mus3 LINE L1 4964 5541 -342 3 1167 1179 133 56 0 chrX 76341806 76342002 -90308294 - L1_Mur2 LINE L1 -2159 3718 3512 3 1167 355 259 57 6 chrX 76342336 76342495 -90307801 + L1M4c LINE L1 2251 2417 -3967 4 1167 602 350 16 56 chrX 76342696 76343165 -90307131 - Lx9 LINE L1 -194 7279 6824 4 1167 969 268 95 18 chrX 76343191 76343571 -90306725 + L1_Rod LINE L1 4556 4964 -883 4 1167 1382 45 6 0 chrX 76343595 76343773 -90306523 + (TTC)n Simple_repeat Simple_repeat 1 179 0 4 1167 1591 121 24 0 chrX 76343896 76344144 -90306152 - L1_Mus4 LINE L1 0 6636 6383 4 1167 238 139 0 0 chrX 76344144 76344187 -90306109 + L1_Mus4 LINE L1 6340 6382 -254 4 1167 2124 250 58 24 chrX 76344185 76344861 -90305435 + L1_Rod LINE L1 4965 5663 -184 4 1167 477 368 7 0 chrX 76345323 76345475 -90304821 + B3 SINE B2 6 158 -58 4 1167 198 0 0 0 chrX 76345487 76345509 -90304787 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 1167 453 36 0 0 chrX 76345509 76345564 -90304732 + (TA)n Simple_repeat Simple_repeat 2 56 0 4 1167 220 184 0 0 chrX 76345675 76345713 -90304583 + (CTTG)n Simple_repeat Simple_repeat 2 39 0 4 1167 26 74 0 0 chrX 76346646 76346700 -90303596 + AT_rich Low_complexity Low_complexity 1 54 0 4 1167 473 254 59 24 chrX 76346954 76347123 -90303173 + L1MA4 LINE L1 5752 5926 -374 4 1167 16214 95 21 1 chrX 76347364 76350405 -90299891 + L1Md_F LINE L1 380 3483 -2400 4 1167 5994 105 1 21 chrX 76350406 76351300 -90298996 + L1Md_F2 LINE L1 5705 6580 -2 4 1167 1004 123 0 0 chrX 76351601 76351739 -90298557 + B1_Mus2 SINE Alu 2 139 -8 4 1167 306 20 19 38 chrX 76351740 76351793 -90298503 + (CAAAA)n Simple_repeat Simple_repeat 4 55 0 4 1167 201 74 0 0 chrX 76351829 76351856 -90298440 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 4 1167 711 35 0 0 chrX 76352021 76352107 -90298189 + (TTTC)n Simple_repeat Simple_repeat 3 88 0 4 1167 24 32 0 0 chrX 76352432 76352463 -90297833 + AT_rich Low_complexity Low_complexity 1 31 0 4 1167 261 83 0 0 chrX 76352491 76352527 -90297769 + (A)n Simple_repeat Simple_repeat 1 36 0 4 1167 2485 97 83 5 chrX 76353816 76354190 -90296106 - RLTR9D LTR ERVK 0 403 1 4 1167 377 312 92 65 chrX 76355051 76355236 -90295060 - B4 SINE B4 0 292 103 4 1167 419 220 8 0 chrX 76355241 76355359 -90294937 + (CATATA)n Simple_repeat Simple_repeat 2 120 0 4 1167 21 0 0 0 chrX 76355371 76355392 -90294904 + AT_rich Low_complexity Low_complexity 1 21 0 4 1167 366 309 60 0 chrX 76355392 76355476 -90294820 - B4A SINE B4 -200 92 4 4 1167 235 235 0 0 chrX 76355599 76355650 -90294646 + (TATG)n Simple_repeat Simple_repeat 2 52 0 4 1167 1722 234 85 32 chrX 76355807 76356279 -90294017 + RMER2 LTR ERV1 1 497 -70 4 1167 1183 103 0 0 chrX 76356279 76356444 -90293852 - Lx LINE L1 -268 6386 6222 4 1167 1078 53 0 0 chrX 76356444 76356575 -90293721 + L1Md_F2 LINE L1 5456 5586 -297 4 1167 7354 54 39 4 chrX 76356575 76357526 -90292770 + L1Md_F2 LINE L1 5587 6570 -12 4 1167 746 202 42 18 chrX 76357575 76357741 -90292555 + L1_Mus4 LINE L1 6428 6597 -39 4 1167 409 279 0 35 chrX 76357888 76358003 -90292293 - B1F SINE Alu -3 146 36 4 1167 692 287 34 28 chrX 76358392 76358718 -90291578 + L1_Mur3 LINE L1 4508 4835 -1045 4 1167 1154 103 45 6 chrX 76358719 76358895 -90291401 - B2_Mm1a SINE B2 -10 183 1 4 1167 504 48 0 0 chrX 76358917 76358980 -90291316 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 1167 3909 202 109 1 chrX 76359019 76359832 -90290464 - Lx5 LINE L1 -3 7047 6147 4 1167 862 204 20 73 chrX 76359838 76360086 -90290210 - RLTR25B LTR ERVK -12 1016 782 4 1167 408 111 0 0 chrX 76360138 76360210 -90290086 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 1167 483 96 0 0 chrX 76360210 76360293 -90290003 + (GA)n Simple_repeat Simple_repeat 2 84 0 4 1167 3291 190 63 29 chrX 76360293 76361009 -90289287 - RLTR25A LTR ERVK -213 890 151 4 1167 1996 162 55 8 chrX 76361036 76361402 -90288894 - Lx LINE L1 -298 6356 5974 4 1167 382 230 49 20 chrX 76361404 76361506 -90288790 - RLTR25B LTR ERVK -848 255 151 4 1167 8209 160 7 7 chrX 76361561 76363142 -90287154 - L1_Mus4 LINE L1 -672 5964 4385 4 1167 185 0 40 0 chrX 76364598 76364623 -90285673 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 4 1167 703 187 18 2 chrX 76364836 76364970 -90285326 - B1_Mur3 SINE Alu 0 147 4 4 1167 905 25 0 0 chrX 76365007 76365126 -90285170 - L1Md_A LINE L1 0 6582 6464 4 1167 357 109 0 0 chrX 76365437 76365501 -90284795 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 4 1167 210 37 0 0 chrX 76365503 76365530 -90284766 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 1167 33629 88 6 4 chrX 76365866 76371832 -90278464 - L1Md_F2 LINE L1 -1 6581 610 4 1167 22 0 0 0 chrX 76371910 76371932 -90278364 + AT_rich Low_complexity Low_complexity 1 22 0 4 1167 26 30 0 0 chrX 76372012 76372045 -90278251 + AT_rich Low_complexity Low_complexity 1 33 0 4 1167 32 0 0 0 chrX 76372120 76372152 -90278144 + AT_rich Low_complexity Low_complexity 1 32 0 4 1167 22 70 0 0 chrX 76373054 76373097 -90277199 + AT_rich Low_complexity Low_complexity 1 43 0 4 1167 520 217 35 9 chrX 76373147 76373263 -90277033 - PB1D9 SINE Alu -1 119 1 4 1167 7191 126 34 14 chrX 76373830 76375599 -90274697 + L1_Mus4 LINE L1 4815 6629 -7 4 1167 330 305 20 72 chrX 76376381 76376533 -90273763 - MTEa LTR MaLR -8 371 228 4 1167 272 211 0 0 chrX 76376644 76376701 -90273595 + L1M4 LINE L1 5738 5794 -380 4 1167 921 44 0 0 chrX 76377720 76377834 -90272462 + (GAA)n Simple_repeat Simple_repeat 1 114 0 4 1167 2260 118 35 38 chrX 76377959 76378382 -90271914 + BGLII_Mus LTR ERVK 1 422 0 4 1167 786 75 0 0 chrX 76378431 76378537 -90271759 - B1_Mm SINE Alu 0 147 42 4 1167 304 0 0 160 chrX 76378540 76378696 -90271600 + (CTCTG)n Simple_repeat Simple_repeat 5 135 0 4 1167 340 117 0 48 chrX 76378697 76378760 -90271536 - B1_Mus1 SINE Alu -88 60 1 4 1167 188 35 35 0 chrX 76379229 76379258 -90271038 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 4 1167 22 0 0 0 chrX 76379667 76379689 -90270607 + AT_rich Low_complexity Low_complexity 1 22 0 4 1167 789 50 244 0 chrX 76379689 76379808 -90270488 - B1_Mus1 SINE Alu 0 148 1 4 1167 850 267 19 10 chrX 76379935 76380143 -90270153 - B3 SINE B2 -1 215 6 4 1167 7908 60 2 1 chrX 76380269 76381279 -90269017 + L1Md_F2 LINE L1 4575 5585 -298 4 1167 8056 44 4 0 chrX 76381280 76382270 -90268026 + L1Md_F2 LINE L1 5587 6580 -2 4 1167 500 320 93 39 chrX 76382831 76383088 -90267208 + MLT1A LTR MaLR 8 278 -96 4 1167 1017 85 0 0 chrX 76383433 76383574 -90266722 + (TC)n Simple_repeat Simple_repeat 2 142 0 4 1167 1534 182 84 12 chrX 76383578 76383912 -90266384 - Lx6 LINE L1 -582 6878 6521 4 1167 1490 277 89 31 chrX 76383979 76384141 -90266155 + Lx6 LINE L1 6963 7134 -326 4 1167 423 0 0 0 chrX 76384141 76384188 -90266108 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1167 1490 277 89 31 chrX 76384188 76384483 -90265813 + Lx6 LINE L1 7135 7447 -13 4 1167 216 0 0 0 chrX 76384688 76384712 -90265584 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1167 191 255 78 0 chrX 76384821 76384872 -90265424 + MIR SINE MIR 84 138 -124 4 1167 23 0 0 0 chrX 76385128 76385151 -90265145 + AT_rich Low_complexity Low_complexity 1 23 0 4 1167 355 322 48 32 chrX 76385999 76386124 -90264172 - B1F1 SINE Alu -21 128 2 4 1167 321 325 68 45 chrX 76386637 76386814 -90263482 - ORR1E LTR MaLR -175 184 4 4 1167 3469 48 11 0 chrX 76387017 76387595 -90262701 - L1Md_F2 LINE L1 -569 6013 5421 4 1167 4171 62 63 7 chrX 76387596 76388152 -90262144 + L1Md_F2 LINE L1 5984 6570 -12 4 1167 2298 106 3 6 chrX 76388488 76388821 -90261475 + IAPLTR1a_Mm LTR ERVK 1 332 -5 4 1167 51981 25 15 19 chrX 76388821 76395321 -90254975 + IAPEz-int LTR ERVK 6 6479 -2 4 1167 2298 106 3 6 chrX 76395323 76395656 -90254640 + IAPLTR1a_Mm LTR ERVK 1 332 -5 4 1167 257 412 0 0 chrX 76395693 76395773 -90254523 - RSINE1 SINE B4 -14 151 72 4 1167 27 29 0 0 chrX 76395896 76395930 -90254366 + AT_rich Low_complexity Low_complexity 1 34 0 4 1167 1728 325 37 26 chrX 76395930 76396855 -90253441 - Lx8 LINE L1 -17 7456 6522 4 1167 186 43 0 0 chrX 76396943 76396966 -90253330 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1167 385 331 90 14 chrX 76397034 76397178 -90253118 + B3A SINE B2 6 160 -38 4 1167 285 109 0 0 chrX 76397183 76397229 -90253067 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1167 306 73 0 0 chrX 76397229 76397270 -90253026 + (ATG)n Simple_repeat Simple_repeat 2 42 0 4 1167 518 343 32 8 chrX 76397681 76397934 -90252362 + MER2 DNA MER2_type 87 345 0 4 1167 5289 82 7 12 chrX 76398263 76398999 -90251297 - Lx LINE L1 -8 6646 5915 4 1167 21 0 0 0 chrX 76399021 76399042 -90251254 + AT_rich Low_complexity Low_complexity 1 21 0 4 1167 414 271 108 43 chrX 76399859 76399966 -90250330 - MTE2b LTR MaLR 0 379 264 4 1167 11840 87 26 30 chrX 76399966 76401744 -90248552 + RLTR22_Mus LTR ERVK 1 1772 -36 4 1167 7180 84 6 34 chrX 76401744 76403057 -90247239 - L1_Mus2 LINE L1 -549 6017 4754 4 1167 3894 103 0 14 chrX 76403059 76403618 -90246678 + L1_Mus2 LINE L1 6015 6565 -1 4 1167 930 106 14 21 chrX 76403619 76403763 -90246533 + RLTR23 LTR ERV1 240 382 -48 4 1167 1339 223 49 17 chrX 76403799 76404086 -90246210 - MTD LTR MaLR -123 296 1 4 1167 235 208 0 0 chrX 76404325 76404373 -90245923 + MER46C DNA MER2_type 264 311 -27 4 1167 510 294 17 0 chrX 76404657 76404776 -90245520 - B1F SINE Alu -16 133 13 4 1167 420 327 106 59 chrX 76405955 76406010 -90244286 + MTEa LTR MaLR 1 63 -316 4 1167 1549 55 0 5 chrX 76406010 76406210 -90244086 - L1Md_T LINE L1 0 6582 6384 4 1167 420 327 106 59 chrX 76406210 76406391 -90243905 + MTEa LTR MaLR 64 248 -131 4 1167 204 40 0 0 chrX 76406569 76406594 -90243702 + (TATG)n Simple_repeat Simple_repeat 4 28 0 4 1167 243 0 0 0 chrX 76406594 76406621 -90243675 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 1167 312 27 0 0 chrX 76406621 76406657 -90243639 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1167 690 291 14 0 chrX 76406657 76406805 -90243491 - B3A SINE B2 -48 150 1 4 1167 736 344 61 52 chrX 76406867 76407320 -90242976 + MTE-int LTR MaLR 2 466 -1114 4 1167 466 254 61 17 chrX 76407355 76407535 -90242761 - L1MC3 LINE L1 -1346 6439 6252 4 1167 324 296 18 27 chrX 76407549 76407660 -90242636 - L1MD LINE L1 -1140 5006 4897 5 1167 3054 63 5 8 chrX 76407662 76408059 -90242237 + MTA_Mm LTR MaLR 1 396 0 5 1167 423 0 0 0 chrX 76408333 76408380 -90241916 + (TTA)n Simple_repeat Simple_repeat 2 48 0 5 1167 575 336 34 0 chrX 76408787 76408995 -90241301 + B3 SINE B2 1 215 -1 5 1167 821 175 12 18 chrX 76409010 76409173 -90241123 - Lx7 LINE L1 0 7696 7535 5 1167 667 198 53 98 chrX 76409576 76409822 -90240474 + RMER10A LTR ERVL 206 440 -2 5 1167 311 231 19 0 chrX 76411247 76411351 -90238945 + (TA)n Simple_repeat Simple_repeat 2 107 0 5 1167 35 0 0 0 chrX 76411662 76411697 -90238599 + AT_rich Low_complexity Low_complexity 1 35 0 5 1167 331 174 69 11 chrX 76411899 76411986 -90238310 + RLTR42-int LTR ERVK 1905 1996 -3526 5 1167 2884 200 58 15 chrX 76412031 76412685 -90237611 - Lx4B LINE L1 -4 7054 6373 5 1167 60 0 0 0 chrX 76412747 76412807 -90237489 + AT_rich Low_complexity Low_complexity 1 60 0 5 1167 3579 140 36 8 chrX 76412807 76413140 -90237156 - ORR1A3-int LTR MaLR -592 1371 1036 5 1167 774 60 0 0 chrX 76413140 76413240 -90237056 + (TTC)n Simple_repeat Simple_repeat 2 101 0 5 1167 3579 140 36 8 chrX 76413240 76413253 -90237043 - ORR1A3-int LTR MaLR -928 1035 1019 5 1167 342 0 0 0 chrX 76413253 76413291 -90237005 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 5 1167 625 179 7 14 chrX 76413292 76413439 -90236857 - Lx3A LINE L1 -15 6966 6821 5 1167 3579 140 36 8 chrX 76413439 76413724 -90236572 - ORR1A3-int LTR MaLR -945 1018 719 5 1167 402 164 0 0 chrX 76413744 76413805 -90236491 - MT2B LTR ERVL -342 259 199 5 1167 288 282 42 0 chrX 76413745 76413816 -90236480 - B1_Mus2 SINE Alu -44 103 30 5 1167 236 239 272 0 chrX 76413795 76413887 -90236409 - RMER19C LTR ERVK -384 227 111 5 1167 275 63 15 45 chrX 76413887 76413953 -90236343 + (CAAAAA)n Simple_repeat Simple_repeat 5 68 0 5 1167 1380 245 15 45 chrX 76414003 76414405 -90235891 - Lx5 LINE L1 -600 6450 6061 5 1167 593 283 124 75 chrX 76414431 76414779 -90235517 + RLTR9A LTR ERVK 4 368 0 5 145 4359 191 32 22 chrX 76414785 76415945 -90234351 - Lx5 LINE L1 -986 6064 4905 5 1168 1661 218 36 82 chrX 76415945 76416435 -90233861 - RLTR1B LTR ERV1 0 512 1 5 1168 8222 149 67 88 chrX 76416435 76418434 -90231862 - RLTR1B-int LTR ERV1 0 3299 1345 5 1168 1348 209 42 28 chrX 76418941 76419295 -90231001 - RLTR10D LTR ERVK 0 359 1 5 1168 1925 182 19 8 chrX 76419295 76419666 -90230630 - IAP-d-int LTR ERVK 0 6542 6168 5 1168 2058 248 2 19 chrX 76419715 76420307 -90229989 - IAP-d-int LTR ERVK -483 6059 5478 5 1168 16808 268 17 11 chrX 76420311 76425440 -90224856 - IAP-d-int LTR ERVK -1377 5165 3 5 1168 1391 207 45 31 chrX 76425442 76425796 -90224500 - RLTR10D LTR ERVK 0 359 1 5 1168 698 196 119 62 chrX 76425914 76426521 -90223775 - RLTR1B-int LTR ERV1 -6933 623 3 5 1168 1646 225 113 63 chrX 76426523 76427011 -90223285 - RLTR1B LTR ERV1 0 512 1 5 1168 2142 175 7 0 chrX 76427011 76427428 -90222868 - Lx5 LINE L1 -969 4908 4489 5 1168 2242 158 8 48 chrX 76427830 76428309 -90221987 - Lx5 LINE L1 -1383 4494 4035 5 1168 402 282 53 18 chrX 76428309 76428489 -90221807 + RLTR19-int LTR ERVK 7362 7508 -1451 5 1168 368 230 95 95 chrX 76428568 76428789 -90221507 + RLTR19-int LTR ERVK 2860 3080 -3057 5 1168 185 0 40 0 chrX 76428917 76428942 -90221354 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 5 1168 581 228 161 103 chrX 76429002 76429284 -90221012 + RLTR19-int LTR ERVK 3193 3491 -2646 5 1168 459 32 0 0 chrX 76429284 76429346 -90220950 + L1Md_T LINE L1 6521 6582 0 5 1168 581 227 125 89 chrX 76429346 76429944 -90220352 + RLTR19-int LTR ERVK 3492 4032 -2105 5 1168 279 297 0 13 chrX 76430151 76430226 -90220070 + RLTR19-int LTR ERVK 4246 4319 -1818 5 1168 1117 217 125 44 chrX 76430269 76430678 -90219618 + RMER10A LTR ERVL 1 442 0 5 1168 765 117 22 0 chrX 76432326 76432463 -90217833 + (GAAA)n Simple_repeat Simple_repeat 4 143 0 5 1168 827 200 117 68 chrX 76433023 76433454 -90216842 + RMER6C LTR ERVK 111 690 0 5 1168 22 0 0 0 chrX 76434383 76434405 -90215891 + AT_rich Low_complexity Low_complexity 1 22 0 5 1168 243 182 0 0 chrX 76434491 76434547 -90215749 + L1VL2 LINE L1 443 492 -5843 5 1168 597 368 28 49 chrX 76434560 76434886 -90215410 - RLTR17 LTR ERVK -249 443 125 5 1168 2401 170 3 3 chrX 76435165 76435695 -90214601 + L1VL4 LINE L1 486 1015 -2544 5 1168 21240 144 17 44 chrX 76435693 76441642 -90208654 + L1_Mur1 LINE L1 31 5565 -318 5 1168 3779 150 8 7 chrX 76441640 76442344 -90207952 - L1_Mur2 LINE L1 -3033 2844 2140 5 1168 375 20 0 0 chrX 76442354 76442405 -90207891 - L1_Mus1 LINE L1 -1 6566 6516 5 1168 1608 79 0 4 chrX 76442405 76442628 -90207668 + L1_Mus1 LINE L1 5918 6140 -427 5 1168 427 208 24 0 chrX 76442624 76442749 -90207547 - L1_Mur2 LINE L1 -3723 2154 2027 5 1168 1048 140 4 11 chrX 76442795 76443045 -90207251 - L1_Mur2 LINE L1 -4461 1416 1174 5 1168 31745 80 8 10 chrX 76443064 76449253 -90201043 - L1Md_F2 LINE L1 -14 6568 366 5 1168 625 140 10 10 chrX 76449253 76449354 -90200942 - MT2C_Mm LTR ERVL -77 398 298 5 1168 1892 191 182 16 chrX 76449355 76449838 -90200458 - L1_Mur2 LINE L1 -5963 1123 561 5 1168 381 131 0 0 chrX 76450601 76450662 -90199634 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 1168 7744 193 63 12 chrX 76451569 76452621 -90197675 + L1_Mur2 LINE L1 911 2048 -3829 5 1168 351 0 0 0 chrX 76452621 76452660 -90197636 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1168 7744 189 48 13 chrX 76452660 76453433 -90196863 + L1_Mur2 LINE L1 2049 2881 -2996 5 1168 817 60 8 8 chrX 76453433 76453550 -90196746 + (GAAA)n Simple_repeat Simple_repeat 3 119 0 5 1168 7744 189 48 13 chrX 76453550 76453822 -90196474 + L1_Mur2 LINE L1 2882 3152 -2725 5 1168 604 115 0 66 chrX 76453855 76453976 -90196320 + Lx2B LINE L1 6886 6998 -2 5 1168 513 284 95 26 chrX 76453976 76454207 -90196089 - Lx7 LINE L1 -387 7309 7063 5 1168 2219 184 8 5 chrX 76454266 76454649 -90195647 + MTC LTR MaLR 30 413 -8 5 1168 193 70 45 23 chrX 76454649 76454693 -90195603 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 5 1168 335 401 6 41 chrX 76454693 76454862 -90195434 + B3 SINE B2 9 171 -45 5 1168 218 32 32 0 chrX 76454863 76454894 -90195402 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1168 306 0 0 0 chrX 76454894 76454927 -90195369 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 1168 589 317 115 36 chrX 76455678 76456156 -90194140 + MLT2B1 LTR ERVL 1 516 -4 5 1168 585 297 54 47 chrX 76457452 76457573 -90192723 + LTR40a LTR ERVL 8 127 -392 5 1168 2953 68 5 10 chrX 76457573 76457971 -90192325 - MTA_Mm LTR MaLR 0 396 1 5 1168 585 297 54 47 chrX 76457971 76458107 -90192189 + LTR40a LTR ERVL 128 267 -252 5 1168 207 69 0 0 chrX 76458150 76458179 -90192117 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 5 1168 257 0 30 0 chrX 76458322 76458355 -90191941 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 5 1168 259 239 33 0 chrX 76458445 76458537 -90191759 + A-rich Low_complexity Low_complexity 2 96 0 5 1168 3884 147 101 94 chrX 76458584 76459484 -90190812 + RMER17A2 LTR ERVK 1 906 0 5 1168 2907 94 2 9 chrX 76460001 76460420 -90189876 + L1Md_F2 LINE L1 6165 6580 -2 5 1168 547 95 0 0 chrX 76460446 76460520 -90189776 + L1Md_F2 LINE L1 5513 5586 -297 5 1168 7940 58 0 4 chrX 76460521 76461515 -90188781 + L1Md_F2 LINE L1 5588 6577 -5 5 1168 384 22 0 0 chrX 76461692 76461737 -90188559 + (T)n Simple_repeat Simple_repeat 1 45 0 5 1168 1081 109 0 0 chrX 76461737 76461884 -90188412 - B1_Mus1 SINE Alu 0 148 2 5 1168 791 176 128 37 chrX 76463978 76464334 -90185962 + RMER6B LTR ERVK 5 451 -10 5 1168 3024 89 26 0 chrX 76464355 76464782 -90185514 - Lx3_Mus LINE L1 0 7009 6572 5 1168 307 300 47 34 chrX 76464878 76465052 -90185244 + MLT1C LTR MaLR 4 175 -215 5 1168 21 71 0 0 chrX 76465244 76465286 -90185010 + AT_rich Low_complexity Low_complexity 1 42 0 5 1168 466 265 89 75 chrX 76465431 76465768 -90184528 - MLT1C LTR MaLR 0 467 75 5 1168 9896 112 13 5 chrX 76465787 76468232 -90182064 + L1VL2 LINE L1 65 2527 -1088 5 1168 15469 137 24 9 chrX 76469452 76472885 -90177411 + L1Md_F LINE L1 306 3760 -2123 5 1168 2145 143 147 21 chrX 76472885 76473313 -90176983 - RLTR45 LTR ERVK 0 482 1 5 1168 6939 103 17 2 chrX 76473313 76474430 -90175866 - RLTR45-int LTR ERVK -456 7761 6331 5 1168 2571 43 3 9 chrX 76474787 76475118 -90175178 - RLTR45-int LTR ERVK -5596 1648 1320 5 1168 495 152 61 0 chrX 76475987 76476086 -90174210 - RLTR45-int LTR ERVK -6213 1031 927 5 1168 1622 87 0 13 chrX 76476189 76476422 -90173874 - RLTR45-int LTR ERVK -6334 910 681 5 1168 1893 109 21 49 chrX 76476762 76477091 -90173205 - IAPLTR2b LTR ERVK -7 320 1 5 1168 6355 124 20 21 chrX 76477091 76478259 -90172037 - IAPEz-int LTR ERVK -351 7329 5527 5 1168 27165 47 10 0 chrX 76478926 76482344 -90167952 - IAPEz-int LTR ERVK -966 5515 2065 5 1168 2523 257 22 45 chrX 76482340 76483546 -90166750 - IAPEz-int LTR ERVK -5197 1624 486 5 1168 402 219 33 58 chrX 76483810 76483931 -90166365 - IAPEz-int LTR ERVK -6703 118 1 5 1168 1797 127 22 41 chrX 76483947 76484267 -90166029 - IAPLTR2b LTR ERVK -13 314 1 5 1168 4363 95 25 25 chrX 76484267 76484949 -90165347 - RLTR45-int LTR ERVK -6562 682 1 5 1168 2549 123 39 105 chrX 76484949 76485465 -90164831 - RLTR45 LTR ERVK 0 482 1 5 1168 8165 127 4 10 chrX 76485465 76486844 -90163452 + L1_Mus2 LINE L1 3755 5125 -758 5 1168 6727 80 0 14 chrX 76486843 76487386 -90162910 + L1_Mus2 LINE L1 5617 6158 -408 5 1168 2210 109 31 169 chrX 76487386 76487937 -90162359 - IAPLTR2_Mm LTR ERVK 0 475 1 5 1168 6727 80 0 14 chrX 76487937 76488356 -90161940 + L1_Mus2 LINE L1 6159 6566 0 5 1168 5601 139 19 35 chrX 76488641 76489608 -90160688 - Lx3A LINE L1 -6 6975 6024 5 1168 402 21 0 0 chrX 76489608 76489655 -90160641 + (TCCC)n Simple_repeat Simple_repeat 2 48 0 5 1168 5601 139 19 35 chrX 76489655 76489674 -90160622 - Lx3A LINE L1 -958 6023 6005 5 1168 226 291 200 12 chrX 76489675 76489755 -90160541 - MLT1A0 LTR MaLR -135 230 136 5 1168 240 253 133 0 chrX 76489911 76489986 -90160310 + B1F SINE Alu 14 98 -51 5 1168 1140 210 172 14 chrX 76490589 76490879 -90159417 - ORR1C2 LTR MaLR -48 336 1 5 1168 876 20 0 0 chrX 76491121 76491223 -90159073 + (TC)n Simple_repeat Simple_repeat 1 102 0 5 1168 390 21 0 0 chrX 76491223 76491270 -90159026 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1168 369 0 0 0 chrX 76491587 76491628 -90158668 + (TTG)n Simple_repeat Simple_repeat 1 41 0 5 1168 438 123 0 14 chrX 76491628 76491702 -90158594 - L1_Mur3 LINE L1 -3086 2794 2722 5 1168 519 122 0 12 chrX 76491767 76491850 -90158446 + RLTR20C LTR ERVK 1 82 -452 5 1168 422 117 0 21 chrX 76491858 76491945 -90158351 - Lx3_Mus LINE L1 -912 5724 5644 5 1168 458 266 121 38 chrX 76492224 76492454 -90157842 + RLTR41 LTR ERV1 250 499 -33 5 1168 1201 123 66 4 chrX 76492457 76492685 -90157611 - L1_Mur1 LINE L1 -603 5283 5042 5 1168 7529 125 19 16 chrX 76492682 76493922 -90156374 + Lx3B LINE L1 5727 6969 -4 5 1168 747 266 107 71 chrX 76493949 76494471 -90155825 + L1_Rod LINE L1 5295 5835 -12 5 1168 276 30 0 0 chrX 76494512 76494545 -90155751 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1168 423 0 0 0 chrX 76494566 76494613 -90155683 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 1168 3766 156 43 11 chrX 76495036 76495832 -90154464 + L1_Mur2 LINE L1 2499 3319 -2558 5 1168 6615 173 73 18 chrX 76495841 76497331 -90152965 - Lx4B LINE L1 -7 7051 5484 5 1168 12584 99 37 12 chrX 76497326 76499393 -90150903 + L1_Mur1 LINE L1 2335 4453 -1433 5 1168 201 200 0 24 chrX 76499460 76499501 -90150795 + GA-rich Low_complexity Low_complexity 4 43 0 5 1168 3549 64 33 0 chrX 76499508 76500000 -90150296 + L1Md_F2 LINE L1 5697 6187 -395 5 1168 3069 61 0 5 chrX 76500000 76500394 -90149902 + L1Md_F2 LINE L1 6188 6579 -3 1 1168 1101 95 0 13 chrX 76500587 76500736 -90149560 + B1_Mus2 SINE Alu 1 147 0 2 1168 567 0 0 0 chrX 76500740 76500803 -90149493 + (GA)n Simple_repeat Simple_repeat 2 64 0 3 1168 222 171 0 0 chrX 76500808 76500849 -90149447 + A-rich Low_complexity Low_complexity 1 41 0 4 1168 9572 87 14 13 chrX 76500851 76502241 -90148055 + L1_Mur1 LINE L1 4448 5839 -47 5 1168 21 0 0 0 chrX 76502698 76502719 -90147577 + AT_rich Low_complexity Low_complexity 1 21 0 6 1168 1288 97 0 26 chrX 76503029 76503219 -90147077 - B2_Mm2 SINE B2 -9 186 2 7 1168 627 164 0 0 chrX 76504125 76504235 -90146061 + L1_Mur3 LINE L1 2570 2679 -3201 8 1168 6530 140 24 8 chrX 76504370 76505897 -90144399 + Lx2 LINE L1 5084 6640 -357 9 1168 1333 122 14 5 chrX 76505900 76506114 -90144182 + Lx2 LINE L1 6775 6990 -7 9 1168 4272 85 12 7 chrX 76506110 76506703 -90143593 + L1_Mus1 LINE L1 5970 6565 -2 1 1168 3042 207 80 16 chrX 76506832 76507641 -90142655 + L1_Mur3 LINE L1 2684 3544 -2336 8 1168 917 111 13 0 chrX 76507747 76507900 -90142396 - L1_Mur1 LINE L1 -2166 3720 3566 1 1168 1736 71 0 8 chrX 76507888 76508130 -90142166 + L1_Mur1 LINE L1 3341 3580 -2306 1 1168 5752 93 12 83 chrX 76508124 76509160 -90141136 + L1_Mur1 LINE L1 2714 3675 -2211 1 1168 730 256 63 39 chrX 76509637 76509844 -90140452 + B3 SINE B2 1 212 -4 1 1168 3186 237 31 34 chrX 76509965 76510600 -90139696 + Lx5 LINE L1 6259 6901 -149 1 1168 1186 48 170 0 chrX 76510600 76510765 -90139531 - B2_Mm2 SINE B2 -1 194 2 1 1168 3186 237 31 34 chrX 76510765 76510923 -90139373 + Lx5 LINE L1 6902 7050 0 1 1168 21 36 0 0 chrX 76510951 76510979 -90139317 + AT_rich Low_complexity Low_complexity 1 28 0 1 1168 3445 87 54 14 chrX 76511173 76511688 -90138608 + Lx3_Mus LINE L1 6473 7008 -1 1 1168 180 0 0 0 chrX 76511688 76511708 -90138588 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 1 1168 848 88 0 0 chrX 76512390 76512504 -90137792 + B1_Mus1 SINE Alu 35 148 0 1 1168 316 145 79 0 chrX 76512704 76512780 -90137516 + Lx2 LINE L1 6889 6970 -27 2 1168 299 61 41 0 chrX 76512780 76512829 -90137467 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 2 1168 25 0 0 0 chrX 76513815 76513840 -90136456 + AT_rich Low_complexity Low_complexity 1 25 0 2 1168 23 33 0 0 chrX 76514046 76514076 -90136220 + AT_rich Low_complexity Low_complexity 1 30 0 2 1168 894 311 68 18 chrX 76514190 76514468 -90135828 - B4A SINE B4 0 292 1 2 1168 291 309 0 10 chrX 76514979 76515077 -90135219 + L1MD1 LINE L1 5830 5926 -316 2 1168 288 415 0 21 chrX 76515080 76515176 -90135120 + RSINE1 SINE B4 58 151 -14 2 1168 25 51 0 0 chrX 76515493 76515532 -90134764 + AT_rich Low_complexity Low_complexity 1 39 0 2 1168 31 44 0 0 chrX 76516145 76516190 -90134106 + AT_rich Low_complexity Low_complexity 1 45 0 2 1168 29908 111 24 25 chrX 76516255 76517637 -90132659 + L1Md_F2 LINE L1 515 1871 -4012 2 1168 3361 35 2 0 chrX 76517637 76518041 -90132255 - L1Md_T LINE L1 0 6582 6178 3 1168 29908 91 7 22 chrX 76518041 76521782 -90128514 + L1Md_F2 LINE L1 1872 5581 -302 2 1168 7282 85 0 2 chrX 76521782 76522760 -90127536 + L1Md_F2 LINE L1 5595 6570 -12 2 1168 22 35 0 0 chrX 76522823 76522852 -90127444 + AT_rich Low_complexity Low_complexity 1 29 0 3 1168 474 249 83 7 chrX 76523326 76523525 -90126771 - MTD LTR MaLR -14 405 176 3 1168 570 319 36 18 chrX 76523531 76524095 -90126201 - L1M2 LINE L1 -1594 4283 3682 3 1168 263 346 169 45 chrX 76524654 76525256 -90125040 - L2 LINE L2 -610 2809 2133 3 1168 210 37 0 0 chrX 76525490 76525517 -90124779 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1168 493 214 0 0 chrX 76525534 76525618 -90124678 - B1_Mus2 SINE Alu -53 94 11 3 1168 24 32 0 0 chrX 76525631 76525662 -90124634 + AT_rich Low_complexity Low_complexity 1 31 0 3 1168 6362 84 8 3 chrX 76526153 76527036 -90123260 + L1_Mus2 LINE L1 5684 6566 0 3 1168 255 370 0 0 chrX 76527067 76527148 -90123148 + ID4_ SINE ID 1 81 -2 3 1168 216 200 0 20 chrX 76527508 76527559 -90122737 + (TATG)n Simple_repeat Simple_repeat 3 52 0 4 1168 211 254 111 0 chrX 76528194 76528257 -90122039 - B1F2 SINE Alu -20 129 60 4 1168 631 323 31 6 chrX 76529463 76529622 -90120674 + RSINE1 SINE B4 3 165 0 4 1168 3987 112 126 15 chrX 76529877 76530835 -90119461 + L1Md_F LINE L1 385 1471 -4412 4 1168 4825 95 0 21 chrX 76530835 76531533 -90118763 + L1Md_F2 LINE L1 5890 6572 -10 4 1168 1074 227 36 0 chrX 76531533 76531567 -90118729 + L1_Mur1 LINE L1 1472 1516 -4370 4 1168 335 351 14 36 chrX 76532084 76532223 -90118073 + B1F SINE Alu 7 142 -7 4 1168 34888 48 3 3 chrX 76532461 76537921 -90112375 + L1Md_T LINE L1 39 5589 -297 4 1168 8240 40 1 4 chrX 76537921 76538970 -90111326 + L1Md_T LINE L1 5590 6585 0 4 1168 551 319 88 23 chrX 76539159 76539512 -90110784 + L1MDa LINE L1 1694 2069 -4564 4 1168 22 0 0 0 chrX 76540840 76540862 -90109434 + AT_rich Low_complexity Low_complexity 1 22 0 4 1168 31 58 0 0 chrX 76541577 76541629 -90108667 + AT_rich Low_complexity Low_complexity 1 52 0 5 1168 2027 184 50 16 chrX 76542012 76542227 -90108069 + L1VL4 LINE L1 888 1107 -5550 5 1168 1427 70 5 0 chrX 76542227 76542413 -90107883 + B2_Mm1t SINE B2 1 187 -6 5 1168 9497 167 104 120 chrX 76542413 76544176 -90106120 + L1VL4 LINE L1 1108 2873 -3004 5 1168 1056 146 0 0 chrX 76544176 76544354 -90105942 + (GAA)n Simple_repeat Simple_repeat 2 179 0 5 1168 9497 166 108 127 chrX 76544354 76544971 -90105325 + L1VL4 LINE L1 2874 3470 -2407 5 1168 3686 34 0 0 chrX 76544971 76545409 -90104887 + L1Md_T LINE L1 6145 6582 0 5 18 9497 166 108 127 chrX 76545409 76546136 -90104160 + L1VL4 LINE L1 3471 4171 -1706 5 1169 309 190 0 0 chrX 76546137 76546195 -90104101 + L1VL4 LINE L1 4297 4354 -1532 5 1169 21 0 0 0 chrX 76546569 76546590 -90103706 + AT_rich Low_complexity Low_complexity 1 21 0 5 1169 198 0 0 0 chrX 76546716 76546738 -90103558 + (CATA)n Simple_repeat Simple_repeat 2 23 0 5 1169 310 45 0 64 chrX 76546741 76546788 -90103508 + HAL1-3A_ME LINE L1 1975 2018 -840 5 1169 1388 139 45 8 chrX 76547023 76547269 -90103027 - L1_Mus4 LINE L1 -6 6630 6376 5 1169 242 274 68 0 chrX 76547739 76547812 -90102484 - ID4_ SINE ID -3 80 3 5 1169 417 176 66 37 chrX 76548254 76548390 -90101906 + Lx9 LINE L1 7504 7643 -1 6 1169 271 341 73 29 chrX 76548838 76548974 -90101322 + MER45A DNA Tip100 11 152 -26 6 1169 384 103 0 0 chrX 76548978 76549036 -90101260 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 1169 870 211 16 73 chrX 76549783 76550029 -90100267 + L1_Rod LINE L1 5616 5847 0 6 1169 247 354 103 51 chrX 76550503 76550834 -90099462 - L2 LINE L2 -2800 619 272 6 1169 1467 147 89 51 chrX 76550862 76551177 -90099119 - L1_Mur2 LINE L1 -1972 3905 3579 6 1169 202 118 29 0 chrX 76551276 76551310 -90098986 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1169 1403 161 11 11 chrX 76551687 76551958 -90098338 + Lx5 LINE L1 4253 4523 -1354 6 1169 4082 190 50 22 chrX 76551955 76553884 -90096412 + Lx5 LINE L1 4985 7047 -3 6 1169 839 30 0 0 chrX 76554147 76554247 -90096049 + L1Md_A LINE L1 5939 6038 -544 6 1169 5093 34 2 2 chrX 76554247 76554862 -90095434 + L1Md_A LINE L1 5966 6580 -2 6 1169 770 184 7 0 chrX 76554960 76555101 -90095195 + URR1A DNA MER1_type 79 220 -6 7 1169 227 244 0 0 chrX 76555105 76555146 -90095150 - ID4_ SINE ID -28 55 15 7 1169 23 0 0 0 chrX 76555264 76555287 -90095009 + AT_rich Low_complexity Low_complexity 1 23 0 7 1169 185 196 20 0 chrX 76555402 76555453 -90094843 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 7 1169 268 347 0 0 chrX 76555459 76555531 -90094765 - ID4_ SINE ID -6 77 6 7 1169 26 0 0 0 chrX 76556070 76556096 -90094200 + AT_rich Low_complexity Low_complexity 1 26 0 7 1169 446 236 28 0 chrX 76556164 76556270 -90094026 - PB1D9 SINE Alu -11 109 1 7 1169 202 103 98 49 chrX 76557314 76557375 -90092921 + (TAAA)n Simple_repeat Simple_repeat 3 66 0 7 1169 198 0 0 0 chrX 76557487 76557509 -90092787 + (TA)n Simple_repeat Simple_repeat 1 22 0 7 1169 21 36 0 0 chrX 76557583 76557611 -90092685 + AT_rich Low_complexity Low_complexity 1 28 0 7 1169 430 298 71 19 chrX 76557738 76557892 -90092404 - RSINE1 SINE B4 0 165 4 8 1169 1581 183 38 14 chrX 76558484 76558777 -90091519 - Lx5 LINE L1 -54 6996 6697 8 1169 770 156 57 3 chrX 76558819 76558990 -90091306 + Lx5 LINE L1 5660 5839 -1621 8 1169 266 237 26 13 chrX 76559485 76559562 -90090734 + Charlie7a DNA MER1_type 194 271 -1 8 1169 605 261 200 0 chrX 76561325 76561505 -90088791 - B3 SINE B2 0 216 1 8 1169 240 428 74 9 chrX 76562480 76562711 -90087585 - LTR16C LTR ERVL -50 439 194 8 1169 255 241 159 11 chrX 76563584 76563672 -90086624 + Lx9 LINE L1 5875 5975 -1669 8 1169 408 40 0 0 chrX 76563841 76563891 -90086405 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 8 1169 405 58 0 0 chrX 76563942 76563994 -90086302 + (TCTG)n Simple_repeat Simple_repeat 3 54 0 8 1169 369 316 20 0 chrX 76564013 76564111 -90086185 + Lx8 LINE L1 6234 6333 -1140 8 1169 30 0 0 0 chrX 76566439 76566469 -90083827 + AT_rich Low_complexity Low_complexity 1 30 0 9 1169 198 167 0 0 chrX 76566778 76566814 -90083482 + (CATATA)n Simple_repeat Simple_repeat 1 36 0 9 1169 31 26 0 0 chrX 76567089 76567127 -90083169 + AT_rich Low_complexity Low_complexity 1 38 0 9 1169 24 53 0 0 chrX 76567958 76567996 -90082300 + AT_rich Low_complexity Low_complexity 1 38 0 9 1169 7566 89 15 2 chrX 76568536 76569849 -90080447 + L1_Mus3 LINE L1 5306 6634 -4 9 1169 288 0 0 0 chrX 76569926 76569958 -90080338 + (CA)n Simple_repeat Simple_repeat 2 33 0 9 1169 254 226 16 0 chrX 76570498 76570560 -90079736 + (TA)n Simple_repeat Simple_repeat 1 63 0 9 1169 452 249 138 40 chrX 76571255 76571521 -90078775 + L1MB5 LINE L1 5882 6181 -2 9 1169 552 68 0 0 chrX 76571652 76571725 -90078571 + (TG)n Simple_repeat Simple_repeat 2 74 0 9 1169 1066 109 0 0 chrX 76571906 76572053 -90078243 + B1_Mus1 SINE Alu 2 148 0 9 1169 44 46 0 0 chrX 76572111 76572176 -90078120 + AT_rich Low_complexity Low_complexity 1 65 0 1 1169 400 355 7 7 chrX 76572198 76572351 -90077945 - RSINE1 SINE B4 -10 155 3 1 1169 794 383 0 14 chrX 76572726 76573012 -90077284 + B4A SINE B4 11 292 0 1 1169 231 227 0 0 chrX 76573020 76573086 -90077210 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 1169 27 29 0 0 chrX 76573161 76573195 -90077101 + AT_rich Low_complexity Low_complexity 1 34 0 1 1169 263 364 92 46 chrX 76573639 76573878 -90076418 + MER92A LTR ERV1 4 253 -159 1 1169 571 94 10 10 chrX 76573973 76574070 -90076226 + (TA)n Simple_repeat Simple_repeat 1 97 0 1 1169 1194 156 0 9 chrX 76574074 76574287 -90076009 - Lx2 LINE L1 -13 6984 6774 1 1169 224 348 21 11 chrX 76574997 76575090 -90075206 + MIRm SINE MIR 55 148 -128 1 1169 371 256 38 21 chrX 76575385 76575503 -90074793 - B1F SINE Alu -5 144 8 1 1169 3700 57 4 4 chrX 76577024 76577514 -90072782 - L1_Mus3 LINE L1 -1 6637 6148 1 1169 985 113 59 6 chrX 76577514 76577683 -90072613 + L1_Mus3 LINE L1 5945 6122 -516 1 1169 240 35 0 0 chrX 76578204 76578233 -90072063 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 1 1169 518 228 49 10 chrX 76578466 76578568 -90071728 - B1_Mur2 SINE Alu -37 112 7 1 1169 243 320 25 127 chrX 76578474 76578592 -90071704 - MT2B LTR ERVL -344 257 152 1 1169 237 151 0 0 chrX 76578614 76578667 -90071629 + GA-rich Low_complexity Low_complexity 2 54 0 1 1169 183 100 0 0 chrX 76578773 76578803 -90071493 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1169 240 163 0 0 chrX 76579110 76579153 -90071143 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1169 4920 54 0 0 chrX 76579380 76579991 -90070305 + L1_Mus1 LINE L1 5957 6567 0 1 1169 1986 97 0 3 chrX 76581076 76581365 -90068931 + L1_Mm LINE L1 3998 4285 -1598 1 1169 4359 91 37 5 chrX 76581797 76582439 -90067857 + L1Md_F2 LINE L1 5919 6581 -1 1 1169 26 30 0 0 chrX 76583038 76583071 -90067225 + AT_rich Low_complexity Low_complexity 1 33 0 1 1169 24487 86 9 3 chrX 76583158 76586594 -90063702 + L1Md_F2 LINE L1 2129 5585 -298 1 1169 7263 89 0 3 chrX 76586596 76587591 -90062705 + L1Md_F2 LINE L1 5588 6579 -3 1 1169 2127 122 209 16 chrX 76587756 76588185 -90062111 + Lx LINE L1 6126 6639 -15 1 1169 267 54 0 0 chrX 76588606 76588643 -90061653 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 1169 1859 305 82 40 chrX 76588673 76589060 -90061236 + Lx8 LINE L1 6315 6718 -755 1 1169 1057 80 0 0 chrX 76589060 76589198 -90061098 + B1_Mm SINE Alu 1 138 -9 1 1169 267 104 0 0 chrX 76589198 76589246 -90061050 + (CAA)n Simple_repeat Simple_repeat 2 49 0 1 1169 1859 305 82 40 chrX 76589246 76589753 -90060543 + Lx8 LINE L1 6719 7246 -227 1 1169 24 0 0 0 chrX 76590816 76590840 -90059456 + AT_rich Low_complexity Low_complexity 1 24 0 1 1169 30 27 0 0 chrX 76591074 76591111 -90059185 + AT_rich Low_complexity Low_complexity 1 37 0 1 1169 761 94 0 0 chrX 76591225 76591331 -90058965 + Lx3_Mus LINE L1 6584 6689 -320 1 1169 422 408 67 32 chrX 76591349 76591914 -90058382 - L1M4 LINE L1 -5558 984 400 1 1169 270 214 22 11 chrX 76592359 76592449 -90057847 + GA-rich Low_complexity Low_complexity 2 92 0 1 1169 250 200 0 0 chrX 76592847 76592902 -90057394 + L1M3 LINE L1 5595 5649 -522 1 1169 1899 270 42 8 chrX 76593845 76594327 -90055969 + Lx6 LINE L1 6947 7444 -16 1 1169 347 303 37 0 chrX 76594426 76594535 -90055761 + PB1D7 SINE Alu 1 113 -7 1 1169 285 322 160 7 chrX 76594741 76594885 -90055411 + Kanga1d DNA Tc2 229 394 -215 1 1169 223 389 0 14 chrX 76594955 76595028 -90055268 - ID2 SINE ID -4 79 8 1 1169 21 0 0 0 chrX 76595134 76595155 -90055141 + AT_rich Low_complexity Low_complexity 1 21 0 1 1169 286 330 122 9 chrX 76596614 76596721 -90053575 + B1F SINE Alu 23 141 -8 1 1169 7416 100 29 0 chrX 76596729 76598300 -90051996 + L1_Mus1 LINE L1 4935 6566 -1 1 1169 6843 117 22 1 chrX 76598311 76599566 -90050730 + L1_Mus3 LINE L1 5357 6632 -6 1 1169 260 331 60 8 chrX 76599568 76599702 -90050594 + LTR37B LTR ERV1 4 144 -324 1 1169 22 35 0 0 chrX 76600903 76600932 -90049364 + AT_rich Low_complexity Low_complexity 1 29 0 1 1169 372 59 0 0 chrX 76601245 76601296 -90049000 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 1169 342 0 0 0 chrX 76601296 76601333 -90048963 + (GA)n Simple_repeat Simple_repeat 1 38 0 1 1169 468 0 0 0 chrX 76601632 76601684 -90048612 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 1169 2974 66 10 0 chrX 76601743 76602135 -90048161 - MTA_Mm LTR MaLR 0 396 1 1 1169 7285 90 35 12 chrX 76602135 76603208 -90047088 - MTA_Mm-int LTR MaLR 0 1098 1 1 1169 3052 61 5 15 chrX 76603208 76603608 -90046688 - MTA_Mm LTR MaLR 0 396 1 1 1169 365 381 90 3 chrX 76603738 76604028 -90046268 + MER115 DNA Tip100 346 660 -33 1 1169 23 54 0 0 chrX 76604849 76604886 -90045410 + AT_rich Low_complexity Low_complexity 1 37 0 1 1169 341 344 77 52 chrX 76605067 76605429 -90044867 + RMER5 LTR ERV1 15 385 -149 1 1169 264 77 0 0 chrX 76605502 76605541 -90044755 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 1 1169 24 0 0 0 chrX 76605705 76605729 -90044567 + AT_rich Low_complexity Low_complexity 1 24 0 1 1169 27 62 0 0 chrX 76605960 76606008 -90044288 + AT_rich Low_complexity Low_complexity 1 48 0 1 1169 28 29 0 0 chrX 76606086 76606121 -90044175 + AT_rich Low_complexity Low_complexity 1 35 0 1 1169 273 230 0 0 chrX 76606787 76606861 -90043435 + CT-rich Low_complexity Low_complexity 2 75 0 1 1169 405 0 0 0 chrX 76607679 76607724 -90042572 + (TC)n Simple_repeat Simple_repeat 1 45 0 1 1169 198 0 0 0 chrX 76607724 76607745 -90042551 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 1169 200 86 29 0 chrX 76607762 76607797 -90042499 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1169 23 0 0 0 chrX 76607976 76607999 -90042297 + AT_rich Low_complexity Low_complexity 1 23 0 1 1169 1169 121 6 0 chrX 76608165 76608338 -90041958 - L1_Mus3 LINE L1 -187 5696 5523 1 1169 6437 96 27 4 chrX 76608332 76609263 -90041033 + L1_Mus3 LINE L1 5687 6638 0 1 1169 23 0 0 0 chrX 76609463 76609486 -90040810 + AT_rich Low_complexity Low_complexity 1 23 0 1 1169 2649 48 0 0 chrX 76609986 76610317 -90039979 + L1_Mus1 LINE L1 6237 6567 0 1 1169 206 152 30 53 chrX 76610687 76610741 -90039555 + A-rich Low_complexity Low_complexity 4 58 0 1 1169 994 129 0 0 chrX 76610741 76610888 -90039408 + B1_Mus1 SINE Alu 2 148 0 1 1169 206 152 30 53 chrX 76610888 76610965 -90039331 + A-rich Low_complexity Low_complexity 59 132 0 1 1169 548 113 45 45 chrX 76612091 76612248 -90038048 + Lx3_Mus LINE L1 6845 7001 -8 1 1169 22 35 0 0 chrX 76612420 76612449 -90037847 + AT_rich Low_complexity Low_complexity 1 29 0 1 1169 2834 182 59 14 chrX 76613152 76613793 -90036503 + L1_Mur2 LINE L1 2507 3176 -2701 1 1169 2219 136 66 29 chrX 76613793 76614246 -90036050 + L1_Mur2 LINE L1 4202 4671 -1206 1 1169 363 326 42 63 chrX 76614455 76614645 -90035651 + MLT1E1A LTR MaLR 427 612 -68 1 1169 6844 110 30 10 chrX 76615174 76616296 -90034000 - L1_Mus3 LINE L1 -4 6634 5495 1 1169 11833 127 6 1 chrX 76616296 76618123 -90032173 + L1_Mus3 LINE L1 3677 5513 -370 1 1169 458 163 22 0 chrX 76618226 76618318 -90031978 + (TATG)n Simple_repeat Simple_repeat 2 95 0 1 1169 2229 166 50 7 chrX 76619133 76619571 -90030725 + Lx LINE L1 6191 6647 -7 1 1169 185 35 0 65 chrX 76619835 76619866 -90030430 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1 1169 445 299 16 16 chrX 76620093 76620222 -90030074 - B1_Mur1 SINE Alu -6 143 15 1 1169 24 0 0 0 chrX 76620228 76620252 -90030044 + AT_rich Low_complexity Low_complexity 1 24 0 1 1169 180 0 0 0 chrX 76621974 76621994 -90028302 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1 1169 360 0 0 0 chrX 76621994 76622034 -90028262 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1169 444 302 60 60 chrX 76622053 76622236 -90028060 + MLT1A0 LTR MaLR 181 363 -2 1 1169 938 90 0 0 chrX 76622331 76622465 -90027831 + L1_Mus2 LINE L1 6427 6560 -6 1 1169 391 296 93 77 chrX 76623317 76623463 -90026833 + B3A SINE B2 3 156 -42 1 1169 381 43 0 0 chrX 76623463 76623510 -90026786 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1169 391 296 93 77 chrX 76623510 76623546 -90026750 + B3A SINE B2 157 188 -10 1 1169 21 0 0 0 chrX 76623647 76623668 -90026628 + AT_rich Low_complexity Low_complexity 1 21 0 1 1169 716 183 116 0 chrX 76623790 76623954 -90026342 - B2_Mm2 SINE B2 -9 186 4 1 1169 4135 246 22 16 chrX 76624210 76625200 -90025096 + Lx5 LINE L1 6046 7041 -9 1 1169 1847 213 43 47 chrX 76625233 76625770 -90024526 + L1_Mur3 LINE L1 3468 4002 -1878 1 1169 489 34 0 0 chrX 76625775 76625834 -90024462 + (TTTA)n Simple_repeat Simple_repeat 3 61 0 1 1169 306 0 0 0 chrX 76626340 76626374 -90023922 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1169 454 377 35 45 chrX 76626379 76626743 -90023553 + ORR1E LTR MaLR 3 358 -12 1 1169 347 341 165 35 chrX 76626919 76627174 -90023122 + LTR40a LTR ERVL 209 496 -23 1 1169 292 273 54 43 chrX 76627612 76627704 -90022592 + PB1D10 SINE Alu 15 107 -10 1 1169 9950 74 6 1 chrX 76627704 76629036 -90021260 + L1Md_F2 LINE L1 4249 5586 -297 1 1169 7323 76 3 5 chrX 76629036 76630032 -90020264 + L1Md_F2 LINE L1 5587 6580 -2 1 1169 1881 157 0 6 chrX 76630032 76630360 -90019936 + L1_Mm LINE L1 3347 3672 -2211 1 1169 972 116 7 46 chrX 76630360 76630513 -90019783 + B1_Mus1 SINE Alu 1 147 -1 1 1169 405 0 0 0 chrX 76630513 76630558 -90019738 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1169 292 107 118 0 chrX 76630584 76630652 -90019644 + L1_Mm LINE L1 3630 3703 -2180 1 1169 3615 89 0 10 chrX 76630652 76631164 -90019132 + L1_Mus2 LINE L1 6059 6565 -1 1 1169 285 296 110 20 chrX 76631166 76631411 -90018885 + L1M4c LINE L1 850 1116 -5268 1 1169 855 198 12 29 chrX 76631757 76631929 -90018367 - B2_Mm2 SINE B2 -26 169 1 1 1169 43 20 0 0 chrX 76632181 76632231 -90018065 + AT_rich Low_complexity Low_complexity 1 50 0 1 1169 195 42 0 0 chrX 76632415 76632439 -90017857 + (CATATA)n Simple_repeat Simple_repeat 6 29 0 1 1169 231 36 0 0 chrX 76632439 76632466 -90017830 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1169 7204 54 10 10 chrX 76632763 76633684 -90016612 + L1_Mus1 LINE L1 5646 6566 -1 2 1169 692 269 90 25 chrX 76634036 76634280 -90016016 - RMER1C Other Other -3 1339 1080 2 1169 386 356 68 0 chrX 76634465 76634597 -90015699 + RSINE1 SINE B4 12 152 -13 2 1169 3561 193 59 72 chrX 76634597 76635511 -90014785 - RMER19B LTR ERVK 0 902 1 2 1169 1212 140 16 0 chrX 76636257 76636443 -90013853 - B2_Mm2 SINE B2 -6 189 1 2 1169 23 33 0 0 chrX 76636541 76636571 -90013725 + AT_rich Low_complexity Low_complexity 1 30 0 2 1169 371 289 26 38 chrX 76636874 76637005 -90013291 - PB1D10 SINE Alu -11 138 6 2 1169 316 229 0 35 chrX 76637344 76637489 -90012807 + GA-rich Low_complexity Low_complexity 1 140 0 2 1169 497 273 23 0 chrX 76638119 76638247 -90012049 + Lx8 LINE L1 6457 6587 -886 2 1169 389 298 123 18 chrX 76638234 76638453 -90011843 + Lx8 LINE L1 6855 7096 -377 2 1169 777 320 68 43 chrX 76639096 76639537 -90010759 + MER31B LTR ERV1 13 464 -2 2 1169 193 235 127 42 chrX 76639795 76639866 -90010430 - L2 LINE L2 -1372 2047 1971 2 1169 363 390 13 0 chrX 76640617 76640776 -90009520 + RSINE1 SINE B4 3 163 -2 2 1169 2361 235 42 69 chrX 76642576 76643145 -90007151 + L1_Mur3 LINE L1 884 1503 -4374 2 1169 1326 78 0 0 chrX 76643145 76643325 -90006971 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 1169 2361 198 23 108 chrX 76643325 76643384 -90006912 + L1_Mur3 LINE L1 1504 1515 -4362 2 1169 279 0 0 0 chrX 76643384 76643415 -90006881 + (TTA)n Simple_repeat Simple_repeat 2 32 0 2 1169 2361 198 23 108 chrX 76643415 76643757 -90006539 + L1_Mur3 LINE L1 1516 1866 -4011 2 1169 5278 55 16 6 chrX 76645178 76645868 -90004428 + L1Md_F2 LINE L1 5883 6579 -3 2 1169 307 234 135 62 chrX 76646271 76646449 -90003847 - L1MCa LINE L1 -4417 2091 1901 2 1169 209 213 0 0 chrX 76646449 76646496 -90003800 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 1169 13038 85 7 1 chrX 76647558 76650098 -90000198 + L1_Mus1 LINE L1 4011 6566 -1 2 1169 198 103 0 0 chrX 76650366 76650395 -89999901 + (TCCC)n Simple_repeat Simple_repeat 1 29 0 2 1169 508 320 30 20 chrX 76650875 76651067 -89999229 - MTE-int LTR MaLR -1 1579 1386 2 1169 234 0 0 0 chrX 76651067 76651093 -89999203 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 1169 393 39 0 0 chrX 76651100 76651151 -89999145 + (T)n Simple_repeat Simple_repeat 1 51 0 2 1169 1199 54 0 0 chrX 76651151 76651298 -89998998 - B1_Mus2 SINE Alu 0 147 1 2 1169 1168 325 16 52 chrX 76651310 76651749 -89998547 - MTE-int LTR MaLR -548 1032 610 2 1169 376 265 14 70 chrX 76652691 76652833 -89997463 + ID_B1 SINE B4 78 211 -13 2 1169 707 188 8 0 chrX 76652709 76652837 -89997459 + B1_Mus2 SINE Alu 10 138 -9 2 1169 186 128 0 0 chrX 76652866 76652905 -89997391 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1169 23 86 0 0 chrX 76652958 76653016 -89997280 + AT_rich Low_complexity Low_complexity 1 58 0 2 1169 23 0 0 0 chrX 76653104 76653127 -89997169 + AT_rich Low_complexity Low_complexity 1 23 0 2 1169 402 230 86 6 chrX 76653145 76653318 -89996978 - L1MA5 LINE L1 -2 6298 6105 2 1169 1037 189 20 0 chrX 76653711 76653907 -89996389 - L1_Mm LINE L1 -1219 4664 4465 2 1169 570 144 66 25 chrX 76653891 76654012 -89996284 - L1_Mur2 LINE L1 -1546 4340 4215 2 1169 899 169 0 0 chrX 76654016 76654170 -89996126 + L1_Mur2 LINE L1 4320 4473 -1404 2 1169 2089 226 118 10 chrX 76654298 76654918 -89995378 + Lx9 LINE L1 6957 7643 -1 2 1169 270 0 0 0 chrX 76655626 76655656 -89994640 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 1169 948 137 0 0 chrX 76656277 76656423 -89993873 + B1_Mus1 SINE Alu 3 148 0 2 1169 1188 269 84 3 chrX 76656503 76656813 -89993483 - MTEa LTR MaLR 0 379 45 2 1169 422 254 19 107 chrX 76656818 76657034 -89993262 - RMER6C LTR ERVK 0 690 494 2 1169 688 154 266 16 chrX 76657015 76657258 -89993038 - RMER6C LTR ERVK -430 326 1 2 1169 302 254 56 169 chrX 76657300 76657442 -89992854 - PB1 SINE Alu 0 127 2 2 1169 496 302 28 10 chrX 76657316 76657466 -89992830 - ID_B1 SINE B4 -80 212 59 2 1169 24 96 0 0 chrX 76660503 76660576 -89989720 + AT_rich Low_complexity Low_complexity 1 73 0 2 1169 26 74 0 0 chrX 76661473 76661527 -89988769 + AT_rich Low_complexity Low_complexity 1 54 0 2 1169 251 293 13 0 chrX 76661835 76661910 -89988386 + (CATATA)n Simple_repeat Simple_repeat 4 79 0 2 1169 261 57 0 0 chrX 76661986 76662021 -89988275 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1169 3912 16 0 0 chrX 76662601 76663054 -89987242 + L1_Mm LINE L1 3682 4134 -1749 2 1169 26 50 0 0 chrX 76664209 76664249 -89986047 + AT_rich Low_complexity Low_complexity 1 40 0 2 1169 2746 79 35 38 chrX 76664417 76664651 -89985645 - L1_Mus2 LINE L1 0 6566 6344 2 1169 3011 29 0 0 chrX 76664651 76664997 -89985299 + ORR1A0 LTR MaLR 1 346 0 2 1169 2746 79 35 38 chrX 76664997 76665184 -89985112 - L1_Mus2 LINE L1 -223 6343 6146 2 1169 1021 103 0 0 chrX 76665221 76665357 -89984939 + B1_Mus1 SINE Alu 1 136 -12 2 1169 235 316 31 100 chrX 76666073 76666162 -89984134 - LTR81A LTR ERV1? -24 1326 1243 2 1169 853 169 209 21 chrX 76666162 76666349 -89983947 + URR1A DNA MER1_type 1 222 -4 2 1169 235 316 31 100 chrX 76666349 76666389 -89983907 - LTR81A LTR ERV1? -108 1242 1206 2 1169 34 0 0 0 chrX 76666505 76666539 -89983757 + AT_rich Low_complexity Low_complexity 1 34 0 2 1169 262 330 0 32 chrX 76666564 76666658 -89983638 - Lx8 LINE L1 -297 7176 7086 2 1169 29967 97 14 5 chrX 76666788 76671850 -89978446 + L1Md_F2 LINE L1 480 5585 -298 2 1169 7189 82 3 15 chrX 76671851 76672847 -89977449 + L1Md_F2 LINE L1 5587 6570 -12 2 1169 190 292 0 0 chrX 76673605 76673653 -89976643 + MER5A DNA MER1_type 134 181 -8 2 1169 1231 199 25 13 chrX 76674497 76674736 -89975560 - RMER6C LTR ERVK -448 242 1 2 1169 23 0 0 0 chrX 76674922 76674945 -89975351 + AT_rich Low_complexity Low_complexity 1 23 0 2 1169 29 0 0 0 chrX 76675125 76675154 -89975142 + AT_rich Low_complexity Low_complexity 1 29 0 2 1169 39 38 0 0 chrX 76675500 76675553 -89974743 + AT_rich Low_complexity Low_complexity 1 53 0 2 1169 26 64 0 0 chrX 76675831 76675878 -89974418 + AT_rich Low_complexity Low_complexity 1 47 0 2 1169 256 321 104 0 chrX 76676186 76676292 -89974004 + MER119 DNA MER1_type 454 570 -13 2 1169 384 36 0 0 chrX 76676955 76677011 -89973285 + L1_Mus3 LINE L1 6576 6631 -7 2 1170 2088 125 0 15 chrX 76677130 76677470 -89972826 + Lx2 LINE L1 6662 6996 -1 2 1170 762 11 0 0 chrX 76677537 76677624 -89972672 + (CA)n Simple_repeat Simple_repeat 2 88 0 2 1170 510 185 196 37 chrX 76677677 76677840 -89972456 + B2_Mm2 SINE B2 1 189 -6 2 1170 777 56 0 0 chrX 76678093 76678200 -89972096 + (TC)n Simple_repeat Simple_repeat 2 108 0 2 1170 26 50 0 0 chrX 76678806 76678846 -89971450 + AT_rich Low_complexity Low_complexity 1 40 0 2 1170 249 349 12 24 chrX 76679094 76679179 -89971117 + PB1D10 SINE Alu 5 88 -29 2 1170 229 321 95 35 chrX 76679179 76679207 -89971089 + ID_B1 SINE B4 86 205 -19 2 1170 609 269 43 43 chrX 76679411 76679621 -89970675 - Charlie12 DNA MER1_type -305 2568 2359 2 1170 29 28 0 0 chrX 76679869 76679905 -89970391 + AT_rich Low_complexity Low_complexity 1 36 0 2 1170 246 288 41 0 chrX 76680174 76680247 -89970049 + L1M1 LINE L1 5675 5750 -553 2 1170 684 56 0 0 chrX 76680252 76680341 -89969955 + (TATATG)n Simple_repeat Simple_repeat 6 94 0 2 1170 415 105 23 23 chrX 76680356 76680444 -89969852 + (CAGA)n Simple_repeat Simple_repeat 2 89 0 2 1170 531 112 0 0 chrX 76681065 76681145 -89969151 + (TA)n Simple_repeat Simple_repeat 2 81 0 2 1170 1916 71 0 0 chrX 76681715 76681967 -89968329 - L1_Mus1 LINE L1 -462 6105 5854 2 1170 1689 65 0 0 chrX 76681967 76682182 -89968114 + L1_Mus1 LINE L1 6353 6567 0 2 1170 257 214 58 7 chrX 76682457 76682612 -89967684 + GA-rich Low_complexity Low_complexity 1 163 0 2 1170 28 71 0 0 chrX 76682912 76682968 -89967328 + AT_rich Low_complexity Low_complexity 1 56 0 2 1170 181 317 17 0 chrX 76683224 76683284 -89967012 + MER5A DNA MER1_type 9 69 -120 2 1170 639 244 32 69 chrX 76683680 76683870 -89966426 - B3 SINE B2 -3 192 3 2 1170 615 203 54 7 chrX 76683950 76684099 -89966197 - L1_Rod LINE L1 -1923 3924 3769 2 1170 295 260 31 0 chrX 76684120 76684216 -89966080 + L1M2 LINE L1 4605 4703 -1440 2 1170 369 0 0 0 chrX 76684375 76684416 -89965880 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1170 332 311 50 50 chrX 76684436 76684595 -89965701 - B4A SINE B4 -16 276 118 2 1170 501 32 0 0 chrX 76684666 76684729 -89965567 + (TG)n Simple_repeat Simple_repeat 1 63 0 2 1170 39 0 0 0 chrX 76685414 76685453 -89964843 + AT_rich Low_complexity Low_complexity 1 39 0 2 1170 22 0 0 0 chrX 76685515 76685537 -89964759 + AT_rich Low_complexity Low_complexity 1 22 0 2 1170 28 0 0 0 chrX 76685798 76685826 -89964470 + AT_rich Low_complexity Low_complexity 1 28 0 2 1170 404 206 72 0 chrX 76687072 76687169 -89963127 + B2_Mm2 SINE B2 1 104 -91 2 1170 940 300 8 15 chrX 76687225 76687492 -89962804 + Lx5 LINE L1 6478 6742 -308 2 1170 402 260 0 10 chrX 76687500 76687597 -89962699 + ORR1B1 LTR MaLR 232 327 -2 2 1170 7843 179 61 101 chrX 76687605 76690014 -89960282 + ORR1B1-int LTR MaLR 2 1962 -1 2 1170 393 372 104 28 chrX 76690364 76690613 -89959683 + MLT1E1A LTR MaLR 361 628 -52 2 1170 439 264 97 24 chrX 76691605 76691729 -89958567 + B3 SINE B2 73 205 -11 2 1170 234 294 45 124 chrX 76692030 76692232 -89958064 - MamRep434 DNA TcMar -214 212 27 2 1170 203 56 56 0 chrX 76693359 76693395 -89956901 + (TAAAA)n Simple_repeat Simple_repeat 1 38 0 2 1170 4407 149 36 13 chrX 76694432 76695269 -89955027 + L1_Mur2 LINE L1 4489 5344 -533 2 1170 2838 229 59 129 chrX 76695243 76695639 -89954657 + Lx4B LINE L1 6007 6400 -658 2 1170 279 172 14 72 chrX 76695639 76695708 -89954588 - PB1D10 SINE Alu -20 97 33 2 1170 314 231 0 0 chrX 76695647 76695712 -89954584 - 4.5SRNA scRNA scRNA -8 86 22 2 1170 2838 229 59 129 chrX 76695712 76696328 -89953968 + Lx4B LINE L1 6401 7015 -43 2 1170 1037 118 0 6 chrX 76696363 76696533 -89953763 + (GAAA)n Simple_repeat Simple_repeat 4 172 0 2 1170 666 37 0 0 chrX 76696551 76696632 -89953664 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 3 1170 1152 105 44 0 chrX 76696639 76696820 -89953476 - B2_Mm2 SINE B2 -5 190 2 3 1170 21 57 0 0 chrX 76697503 76697538 -89952758 + AT_rich Low_complexity Low_complexity 1 35 0 3 1170 4746 138 25 1 chrX 76697978 76698739 -89951557 + Lx2 LINE L1 6218 6996 -1 3 1170 244 276 67 27 chrX 76698775 76698924 -89951372 + L1MC LINE L1 5055 5209 -937 3 1170 302 331 51 17 chrX 76698950 76699125 -89951171 + L1M5 LINE L1 5256 5436 -743 3 1170 500 268 15 30 chrX 76699134 76699265 -89951031 + RSINE1 SINE B4 6 134 -31 3 1170 1791 234 66 0 chrX 76700195 76700588 -89949708 - MTD LTR MaLR 0 419 1 3 1170 22 94 0 0 chrX 76700594 76700658 -89949638 + AT_rich Low_complexity Low_complexity 1 64 0 3 1170 689 288 78 0 chrX 76700678 76700883 -89949413 + B4A SINE B4 7 227 -65 3 1170 644 246 97 20 chrX 76700893 76701088 -89949208 - B3 SINE B2 -6 210 1 3 1170 232 325 0 0 chrX 76701167 76701247 -89949049 + (TA)n Simple_repeat Simple_repeat 2 81 0 3 1170 2169 291 78 30 chrX 76701328 76701543 -89948753 + Lx9 LINE L1 6363 6602 -1042 3 1170 7194 34 8 3 chrX 76701543 76702417 -89947879 + L1Md_F3 LINE L1 5696 6573 -11 3 1170 2169 291 78 30 chrX 76702417 76703067 -89947229 + Lx9 LINE L1 6603 7269 -375 3 1170 186 209 0 0 chrX 76703893 76703936 -89946360 + (CATATA)n Simple_repeat Simple_repeat 3 45 0 3 1170 1013 76 0 0 chrX 76705457 76705588 -89944708 + B1_Mus1 SINE Alu 1 131 -17 3 1170 450 125 12 0 chrX 76705588 76705668 -89944628 + L1_Mus2 LINE L1 6485 6565 -1 3 1170 360 0 0 0 chrX 76705867 76705907 -89944389 + (GAAAA)n Simple_repeat Simple_repeat 1 40 0 3 1170 1257 61 0 0 chrX 76705907 76706087 -89944209 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 3 1170 207 69 0 0 chrX 76706091 76706120 -89944176 + (CAGGA)n Simple_repeat Simple_repeat 2 30 0 3 1170 623 71 0 10 chrX 76706121 76706220 -89944076 + (GAAAA)n Simple_repeat Simple_repeat 4 101 0 3 1170 11673 136 43 5 chrX 76706283 76709109 -89941187 + Lx LINE L1 3764 6648 -6 3 1170 548 246 9 0 chrX 76709763 76709877 -89940419 + B1_Mur1 SINE Alu 27 141 -8 3 1170 243 189 0 0 chrX 76709877 76709930 -89940366 + GA-rich Low_complexity Low_complexity 1 53 0 3 1170 487 279 18 0 chrX 76710846 76710957 -89939339 - MER58B DNA MER1_type -17 324 212 3 1170 25 105 0 0 chrX 76711169 76711264 -89939032 + AT_rich Low_complexity Low_complexity 1 95 0 3 1170 708 221 12 6 chrX 76712958 76713126 -89937170 - Lx7 LINE L1 -2 7694 7526 3 1170 31009 91 16 1 chrX 76713149 76718275 -89932021 + L1Md_F2 LINE L1 382 5586 -297 3 1170 7417 65 10 14 chrX 76718275 76719273 -89931023 + L1Md_F2 LINE L1 5587 6580 -2 3 1170 318 211 23 23 chrX 76719282 76719413 -89930883 - Lx7 LINE L1 -169 7527 7397 3 1170 243 91 182 0 chrX 76719484 76719539 -89930757 + RMER4B LTR ERVK 1 65 -520 3 1170 1559 137 123 10 chrX 76719586 76719643 -89930653 - RMER4A LTR ERVK -121 345 271 3 1170 425 76 15 0 chrX 76719643 76719709 -89930587 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 1170 1559 137 123 10 chrX 76719709 76719961 -89930335 - RMER4A LTR ERVK -196 270 1 3 1170 195 42 0 0 chrX 76720469 76720493 -89929803 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1170 180 152 0 0 chrX 76721055 76721088 -89929208 + (CATA)n Simple_repeat Simple_repeat 2 34 0 3 1170 22 56 0 0 chrX 76721211 76721247 -89929049 + AT_rich Low_complexity Low_complexity 1 36 0 3 1170 30 27 0 0 chrX 76721507 76721544 -89928752 + AT_rich Low_complexity Low_complexity 1 37 0 3 1170 1832 300 66 40 chrX 76722073 76722830 -89927466 + Lx9 LINE L1 6383 7159 -485 3 1170 542 301 45 39 chrX 76723081 76723416 -89926880 - L1MB8 LINE L1 -222 5956 5620 3 1170 1684 86 13 0 chrX 76723460 76723693 -89926603 - L1_Mus1 LINE L1 -6 6561 6326 3 1170 3629 109 63 0 chrX 76724331 76724900 -89925396 + Lx3_Mus LINE L1 6405 7009 0 3 1170 255 283 0 16 chrX 76725723 76725784 -89924512 + ID4 SINE ID 14 73 -10 3 1170 377 70 18 0 chrX 76725787 76725844 -89924452 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 1170 187 29 27 54 chrX 76726095 76726132 -89924164 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 3 1170 290 274 108 0 chrX 76726820 76726922 -89923374 + MIRb SINE MIR 156 268 0 3 1170 28 0 0 0 chrX 76728777 76728805 -89921491 + AT_rich Low_complexity Low_complexity 1 28 0 3 1170 6932 60 13 11 chrX 76728952 76729860 -89920436 + L1Md_F2 LINE L1 5657 6566 -16 3 1170 299 179 0 18 chrX 76730409 76730466 -89919830 - Lx4A LINE L1 -253 6805 6750 3 1170 813 203 138 42 chrX 76730482 76730765 -89919531 - Lx5 LINE L1 -768 6282 5973 3 1170 642 114 128 8 chrX 76730766 76730899 -89919397 + Lx3_Mus LINE L1 6850 6998 -11 3 1170 4533 214 59 7 chrX 76731147 76732209 -89918087 + Lx2B LINE L1 5881 6998 -2 3 1170 490 316 39 28 chrX 76732323 76732502 -89917794 - B3A SINE B2 -17 181 1 3 1170 23 0 0 0 chrX 76732762 76732785 -89917511 + AT_rich Low_complexity Low_complexity 1 23 0 3 1170 263 261 129 11 chrX 76733159 76733252 -89917044 + MLT2C2 LTR ERVL 1 104 -360 3 1170 381 104 0 38 chrX 76733324 76733404 -89916892 + (TA)n Simple_repeat Simple_repeat 1 77 0 3 1170 28 29 0 0 chrX 76734306 76734341 -89915955 + AT_rich Low_complexity Low_complexity 1 35 0 3 1170 1203 54 0 0 chrX 76734765 76734913 -89915383 - B1_Mus1 SINE Alu 0 148 1 3 1170 291 283 0 0 chrX 76735147 76735207 -89915089 - PB1D10 SINE Alu -9 108 49 3 1170 261 83 0 0 chrX 76735470 76735506 -89914790 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 3 1170 180 158 0 0 chrX 76735506 76735544 -89914752 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1170 22 35 0 0 chrX 76735552 76735581 -89914715 + AT_rich Low_complexity Low_complexity 1 29 0 3 1170 454 246 78 10 chrX 76735598 76735791 -89914505 - L1MA8 LINE L1 -24 6267 6062 3 1170 420 342 13 26 chrX 76735837 76736065 -89914231 - L1M3a LINE L1 -5716 239 15 3 1170 22 0 0 0 chrX 76736703 76736725 -89913571 + AT_rich Low_complexity Low_complexity 1 22 0 3 1170 3457 74 2 0 chrX 76737142 76737590 -89912706 + L1_Mus1 LINE L1 6119 6567 0 3 1170 180 0 0 0 chrX 76737595 76737615 -89912681 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 3 1170 29 0 0 0 chrX 76737643 76737672 -89912624 + AT_rich Low_complexity Low_complexity 1 29 0 3 1170 263 254 0 0 chrX 76737702 76737757 -89912539 + LTR16A1 LTR ERVL 388 442 -14 3 1170 263 280 132 35 chrX 76738029 76738447 -89911849 + L1M2 LINE L1 5124 5584 -707 3 1170 500 149 79 0 chrX 76738490 76738604 -89911692 + L1Md_F2 LINE L1 6458 6580 -2 3 1170 845 138 28 0 chrX 76738786 76738931 -89911365 + Lx3B LINE L1 6822 6970 -3 3 1170 26 0 0 0 chrX 76738938 76738964 -89911332 + AT_rich Low_complexity Low_complexity 1 26 0 3 1170 203 133 0 0 chrX 76739388 76739418 -89910878 + (CAGA)n Simple_repeat Simple_repeat 2 31 0 3 1170 309 51 0 0 chrX 76740284 76740323 -89909973 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 1170 2900 100 49 2 chrX 76740474 76740904 -89909392 - Lx LINE L1 0 6654 6205 3 1170 546 88 0 42 chrX 76741461 76741556 -89908740 - Lx2 LINE L1 -227 6770 6680 3 1170 463 144 87 32 chrX 76741540 76741706 -89908590 + Lx2 LINE L1 6840 6978 -19 3 1170 1823 172 20 64 chrX 76742219 76742610 -89907686 + ORR1C1 LTR MaLR 5 378 0 3 1170 310 242 21 21 chrX 76743623 76743720 -89906576 + L1VL4 LINE L1 379 475 -5827 3 1170 2782 69 4 8 chrX 76743715 76744236 -89906060 + L1VL4 LINE L1 729 1247 -2312 3 1170 3370 189 42 29 chrX 76744237 76744874 -89905422 + L1_Mus4 LINE L1 5519 6123 -874 3 1170 4190 76 7 3 chrX 76744874 76745440 -89904856 + L1Md_F2 LINE L1 6012 6579 -3 3 1170 4757 114 23 32 chrX 76745440 76745896 -89904400 + L1_Mus4 LINE L1 5827 6627 -370 3 1170 3201 53 5 5 chrX 76745896 76746292 -89904004 + MTA_Mm LTR MaLR 1 396 0 3 1170 4757 113 23 32 chrX 76746292 76746580 -89903716 + L1_Mus4 LINE L1 6278 6561 -75 3 1170 217 109 78 0 chrX 76746850 76746914 -89903382 + GA-rich Low_complexity Low_complexity 4 72 0 3 1170 377 289 100 15 chrX 76747462 76747732 -89902564 + L1M4 LINE L1 875 1167 -5375 3 1170 569 288 88 0 chrX 76747820 76748046 -89902250 + L1M4 LINE L1 4539 4784 -1860 3 1170 399 321 44 48 chrX 76748090 76748384 -89901912 + L1M4 LINE L1 4929 5221 -1423 3 1170 431 243 81 0 chrX 76748416 76748564 -89901732 + L1M4 LINE L1 5623 5782 -862 3 1170 1460 239 61 13 chrX 76748591 76748985 -89901311 + Lx8 LINE L1 6676 7088 -385 3 1170 1192 281 72 16 chrX 76749201 76749532 -89900764 + RCHARR1 DNA MER1_type 53 386 -588 3 1170 1282 55 0 22 chrX 76749532 76749716 -89900580 - L1Md_F3 LINE L1 -6 6578 6399 3 1170 1192 281 72 16 chrX 76749716 76749757 -89900539 + RCHARR1 DNA MER1_type 387 445 -529 3 1170 286 274 24 96 chrX 76749725 76749850 -89900446 + RCHARR1 DNA MER1_type 857 972 -2 3 1170 258 32 0 0 chrX 76750702 76750733 -89899563 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1170 1433 178 0 25 chrX 76751203 76751486 -89898810 + Lx6 LINE L1 2226 2501 -3379 3 1170 4640 182 157 11 chrX 76751519 76752633 -89897663 + Lx6 LINE L1 4542 5823 -57 3 1170 315 0 0 0 chrX 76752633 76752668 -89897628 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1170 216 97 0 0 chrX 76752668 76752699 -89897597 + (TATG)n Simple_repeat Simple_repeat 2 32 0 3 1170 4640 230 73 20 chrX 76752699 76753231 -89897065 + Lx6 LINE L1 5824 6373 -1087 3 1170 183 146 0 0 chrX 76754528 76754569 -89895727 + (T)n Simple_repeat Simple_repeat 1 41 0 3 1170 786 299 80 42 chrX 76754587 76754849 -89895447 - MTE2a LTR MaLR 0 379 108 3 1170 256 268 54 68 chrX 76757124 76757169 -89893127 - MER112 DNA MER1_type -22 239 195 3 1170 354 45 0 0 chrX 76757169 76757213 -89893083 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1170 256 268 54 68 chrX 76757213 76757315 -89892981 - MER112 DNA MER1_type -67 194 94 3 1170 730 48 19 0 chrX 76757578 76757681 -89892615 + (CA)n Simple_repeat Simple_repeat 2 106 0 3 1170 317 24 0 23 chrX 76758549 76758592 -89891704 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 3 1170 396 71 0 0 chrX 76760109 76760165 -89890131 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 1170 1291 235 87 12 chrX 76760524 76760868 -89889428 - MTD LTR MaLR -15 404 35 3 1170 321 268 9 18 chrX 76761944 76762165 -89888131 + CT-rich Low_complexity Low_complexity 1 218 0 3 1170 266 0 29 0 chrX 76762264 76762298 -89887998 + (CCCCCA)n Simple_repeat Simple_repeat 2 36 0 3 1170 213 333 61 49 chrX 76763366 76763448 -89886848 - ID4 SINE ID 0 83 1 3 1170 398 296 73 28 chrX 76763805 76764093 -89886203 + L1MD1 LINE L1 5525 5825 -417 3 1170 2021 174 35 16 chrX 76764160 76764533 -89885763 + RLTR14 LTR ERV1 3 382 0 4 1170 2926 176 30 13 chrX 76764562 76765097 -89885199 + RLTR14-int LTR ERV1 1887 2430 -2887 4 1170 4493 162 27 14 chrX 76765147 76765380 -89884916 + RLTR14-int LTR ERV1 3192 3430 -1887 4 1170 468 0 0 0 chrX 76765380 76765432 -89884864 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1170 4493 162 27 14 chrX 76765432 76765987 -89884309 + RLTR14-int LTR ERV1 3431 3989 -1328 4 1170 3717 205 37 22 chrX 76765999 76766786 -89883510 + MERVL_2A-int LTR ERVL 2723 3521 -2240 4 1170 36156 68 18 6 chrX 76766808 76772815 -89877481 - L1Md_F2 LINE L1 0 6582 503 4 1170 318 128 0 0 chrX 76772811 76772858 -89877438 - L1Md_F2 LINE L1 -6393 223 177 4 1170 2948 167 45 30 chrX 76772881 76773456 -89876840 + RLTR14-int LTR ERV1 4734 5317 0 4 1170 2108 138 46 19 chrX 76773476 76773846 -89876450 + RLTR14 LTR ERV1 3 382 0 4 1170 29 28 0 0 chrX 76774278 76774314 -89875982 + AT_rich Low_complexity Low_complexity 1 36 0 4 1170 2335 155 133 27 chrX 76775257 76775768 -89874528 + RMER16-int LTR ERVK 255 819 -4587 4 1170 970 143 36 0 chrX 76775773 76775941 -89874355 + RMER16-int LTR ERVK 938 1111 -5026 4 1170 3014 18 2 108 chrX 76775943 76776377 -89873919 + RLTR10 LTR ERVK 1 388 -2 4 1170 3924 40 37 3 chrX 76776379 76777294 -89873002 + RLTR10-int LTR ERVK 1 998 -989 4 1170 359 258 39 15 chrX 76777358 76777488 -89872808 + RLTR10-int LTR ERVK 1462 1594 -5987 4 1170 8915 12 0 1 chrX 76777571 76778565 -89871731 + RLTR10-int LTR ERVK 992 1984 -3 4 1170 3034 18 2 108 chrX 76778567 76779003 -89871293 + RLTR10 LTR ERVK 1 390 0 4 1170 345 130 0 2 chrX 76779003 76779064 -89871232 + ETnERV2-int LTR ERVK 1891 1944 -5462 4 1170 234 273 55 0 chrX 76779064 76779119 -89871177 + MTC-int LTR MaLR 483 540 -718 4 1170 2125 183 5 30 chrX 76779121 76779522 -89870774 + RLTR45-int LTR ERVK 3020 3410 -3834 4 1170 976 83 8 0 chrX 76779524 76779657 -89870639 + B1_Mus1 SINE Alu 1 134 -14 4 1170 1152 261 27 48 chrX 76779675 76780049 -89870247 + ETnERV2-int LTR ERVK 2378 2743 -4663 4 1170 765 150 16 0 chrX 76780049 76780176 -89870120 + ETnERV2-int LTR ERVK 3293 3421 -3985 4 1170 1884 226 34 29 chrX 76780703 76781145 -89869151 + ETnERV2-int LTR ERVK 6646 7089 -317 4 1170 12474 25 1 0 chrX 76781332 76783486 -89866810 - L1Md_T LINE L1 0 6582 4427 4 1170 37969 40 0 3 chrX 76783486 76789790 -89860506 - L1Md_T LINE L1 0 6585 201 4 1170 286 241 93 60 chrX 76789792 76789942 -89860354 + RLTR43A LTR ERVK 210 364 0 4 1170 558 0 0 0 chrX 76790146 76790208 -89860088 + (TTTC)n Simple_repeat Simple_repeat 3 64 0 4 1170 294 319 0 0 chrX 76790211 76790283 -89860013 - ID4_ SINE ID -10 73 2 4 1170 639 224 106 0 chrX 76790313 76790474 -89859822 - ORR1D2 LTR MaLR -2 368 191 4 1170 269 278 29 67 chrX 76790482 76790586 -89859710 - B1_Mus1 SINE Alu -45 103 4 4 1170 180 0 0 0 chrX 76790914 76790934 -89859362 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 4 1170 405 198 0 0 chrX 76791086 76791172 -89859124 + GA-rich Low_complexity Low_complexity 1 86 0 4 1170 481 259 56 19 chrX 76791201 76791362 -89858934 - RMER15 LTR ERVL -67 508 342 4 1170 961 306 57 24 chrX 76791419 76791754 -89858542 - MTE2b LTR MaLR 0 379 34 4 1170 233 297 208 0 chrX 76791669 76791770 -89858526 - MT2A LTR ERVL -411 122 1 4 1170 2659 31 9 3 chrX 76792500 76792824 -89857472 + IAPLTR2b LTR ERVK 1 326 -1 4 1170 352 376 104 14 chrX 76792889 76793421 -89856875 - LTR41 LTR ERVL -33 735 129 4 1170 13811 71 1 5 chrX 76794203 76796756 -89853540 - L1Md_F2 LINE L1 -3 6579 4035 4 1170 2792 250 47 41 chrX 76796813 76798551 -89851745 - Lx6 LINE L1 -26 7434 5445 4 1170 6370 214 114 21 chrX 76798540 76799078 -89851218 - Lx6 LINE L1 -2385 3492 2925 4 1170 3086 67 14 9 chrX 76799078 76799497 -89850799 + BGLII LTR ERVK 1 421 0 4 1170 6370 214 114 21 chrX 76799497 76800220 -89850076 - Lx6 LINE L1 -2953 2924 2085 4 1170 726 97 0 0 chrX 76800220 76800333 -89849963 + (TC)n Simple_repeat Simple_repeat 2 114 0 4 1170 387 60 0 0 chrX 76800333 76800382 -89849914 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1170 6370 214 114 21 chrX 76800382 76800680 -89849616 - Lx6 LINE L1 -3793 2084 1753 4 1170 5320 63 4 0 chrX 76800680 76801357 -89848939 - L1Md_F2 LINE L1 -1 6581 5902 4 1170 6370 215 114 69 chrX 76801357 76802286 -89848010 - Lx6 LINE L1 -4125 1752 894 4 1170 486 338 35 86 chrX 76802659 76803029 -89847267 + MLT2C1 LTR ERVL 12 362 -35 4 1170 4109 181 82 44 chrX 76803029 76803587 -89846709 + RMER19B LTR ERVK 1 559 -343 4 1170 2059 147 8 25 chrX 76803587 76803950 -89846346 - Lx2B LINE L1 -6 6994 6638 4 1170 4109 181 82 44 chrX 76803950 76804260 -89846036 + RMER19B LTR ERVK 560 902 0 4 1170 603 167 87 133 chrX 76804452 76804546 -89845750 + Lx9 LINE L1 7294 7369 -275 4 1170 3900 98 29 0 chrX 76804546 76805097 -89845199 - RMER2 LTR ERV1 0 567 1 4 1170 603 167 87 133 chrX 76805097 76805175 -89845121 + Lx9 LINE L1 7370 7458 -186 4 1170 4966 28 0 3 chrX 76805294 76805875 -89844421 + L1Md_F2 LINE L1 5991 6569 -13 4 1170 267 145 0 0 chrX 76805882 76805912 -89844384 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1170 782 114 130 0 chrX 76805912 76806043 -89844253 + B1_Mus1 SINE Alu 1 148 0 4 1170 267 145 0 0 chrX 76806043 76806074 -89844222 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1170 26 0 0 0 chrX 76806099 76806125 -89844171 + AT_rich Low_complexity Low_complexity 1 26 0 4 146 23281 25 0 1 chrX 76806838 76810285 -89840011 - L1Md_T LINE L1 -2 6580 3139 4 1171 701 131 19 0 chrX 76810858 76810965 -89839331 - B1_Mus2 SINE Alu -20 127 19 4 1171 251 252 83 55 chrX 76810882 76810966 -89839330 - B4A SINE B4 -100 192 103 4 1171 237 65 0 0 chrX 76810966 76810997 -89839299 + (CCA)n Simple_repeat Simple_repeat 2 32 0 4 1171 251 252 83 55 chrX 76810997 76811021 -89839275 - B4A SINE B4 -190 102 81 4 1171 335 314 0 16 chrX 76811296 76811419 -89838877 + L1MDa LINE L1 42 162 -6471 4 1171 1814 223 28 32 chrX 76811703 76811966 -89838330 + RMER17C LTR ERVK 9 406 -552 4 1171 1064 129 0 11 chrX 76811966 76812146 -89838150 + (TCTCC)n Simple_repeat Simple_repeat 1 178 0 4 1171 1814 196 10 25 chrX 76812146 76812373 -89837923 + RMER17C LTR ERVK 185 410 0 4 1171 2569 190 166 17 chrX 76813309 76813586 -89836710 + RLTR40 LTR ERVK 1 346 -471 4 1171 393 22 0 0 chrX 76813586 76813632 -89836664 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1171 2569 190 166 17 chrX 76813632 76814061 -89836235 + RLTR40 LTR ERVK 347 811 -6 4 1171 228 311 92 0 chrX 76814087 76814283 -89836013 + L1MDa LINE L1 990 1203 -5337 4 1171 385 232 99 77 chrX 76814504 76814686 -89835610 + L1MDa LINE L1 1309 1494 -5046 4 1171 411 334 132 24 chrX 76814757 76815006 -89835290 + L1MDa LINE L1 1720 1989 -4644 4 1171 330 115 0 0 chrX 76815006 76815058 -89835238 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1171 411 334 132 24 chrX 76815058 76815142 -89835154 + L1MDa LINE L1 1990 2088 -4545 4 1171 1707 191 115 48 chrX 76815148 76815619 -89834677 - RMER4B LTR ERVK 0 466 25 4 1171 2151 136 0 28 chrX 76815619 76815983 -89834313 - Lx2 LINE L1 0 6997 6644 4 1171 1707 188 117 40 chrX 76815983 76816000 -89834296 - RMER4B LTR ERVK -553 32 8 4 1171 207 0 0 0 chrX 76816042 76816065 -89834231 + (TA)n Simple_repeat Simple_repeat 2 24 0 4 1171 665 222 81 49 chrX 76816070 76816255 -89834041 + B3A SINE B2 8 198 0 4 1171 381 43 0 0 chrX 76816331 76816378 -89833918 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 1171 228 160 66 13 chrX 76816504 76816580 -89833716 + (TA)n Simple_repeat Simple_repeat 2 81 0 4 1171 436 309 0 0 chrX 76816602 76816699 -89833597 + B1F1 SINE Alu 12 108 -41 4 1171 389 221 38 76 chrX 76816699 76816867 -89833429 + Lx4B LINE L1 6880 7044 -14 4 1171 270 0 0 0 chrX 76816867 76816897 -89833399 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 4 1171 1553 216 116 13 chrX 76817569 76817949 -89832347 - MTD LTR MaLR 0 419 1 4 1171 207 213 21 0 chrX 76817952 76817999 -89832297 + (ATG)n Simple_repeat Simple_repeat 1 48 0 4 1171 299 327 73 21 chrX 76818266 76818428 -89831868 + MIRb SINE MIR 30 205 -63 4 1171 2726 80 82 0 chrX 76818655 76819044 -89831252 - BGLII LTR ERVK 0 421 1 4 1171 513 0 0 0 chrX 76819383 76819440 -89830856 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 4 1171 384 342 0 37 chrX 76819448 76819636 -89830660 + MT2A LTR ERVL 85 265 -268 4 1171 245 342 0 12 chrX 76819712 76819792 -89830504 + MT2A LTR ERVL 306 384 -149 4 1171 340 338 19 32 chrX 76819824 76819980 -89830316 - MT2A LTR ERVL -295 238 85 4 1171 236 215 89 122 chrX 76819930 76820020 -89830276 - MTE2b LTR MaLR -242 137 51 4 1171 322 328 144 5 chrX 76821129 76821316 -89828980 - B3 SINE B2 -1 215 3 4 1171 228 35 0 0 chrX 76821782 76821811 -89828485 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1171 275 266 16 0 chrX 76822885 76822949 -89827347 + Lx8 LINE L1 6227 6291 -1182 4 1171 1164 62 14 0 chrX 76822959 76823105 -89827191 - B1_Mus1 SINE Alu 0 148 1 4 1171 978 202 19 9 chrX 76823117 76823332 -89826964 - RMER6D LTR ERVK -98 622 406 4 1171 10042 51 4 3 chrX 76823332 76825327 -89824969 - L1Md_F3 LINE L1 -3 6581 4584 4 1171 587 96 0 0 chrX 76825309 76825392 -89824904 + L1_Mm LINE L1 4582 4664 -1219 4 1171 414 0 0 0 chrX 76825696 76825742 -89824554 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1171 468 244 16 8 chrX 76825771 76825895 -89824401 - Lx4B LINE L1 -2 7056 6932 4 1171 278 183 66 12 chrX 76826177 76826343 -89823953 + (TA)n Simple_repeat Simple_repeat 1 175 0 4 1171 575 285 249 31 chrX 76827091 76827536 -89822760 - L1MC3 LINE L1 -713 7072 6531 4 1171 26 30 0 0 chrX 76827624 76827657 -89822639 + AT_rich Low_complexity Low_complexity 1 33 0 4 1171 276 161 0 0 chrX 76827747 76827809 -89822487 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 1171 387 60 0 0 chrX 76827812 76827862 -89822434 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 1171 309 89 0 0 chrX 76827865 76827910 -89822386 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1171 292 299 13 11 chrX 76827914 76828037 -89822259 - Lx9 LINE L1 -207 7437 7201 4 1171 280 21 0 78 chrX 76828245 76828296 -89822000 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 4 1171 189 0 0 0 chrX 76828527 76828548 -89821748 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1171 294 50 0 0 chrX 76828705 76828745 -89821551 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 4 1171 303 134 10 100 chrX 76828759 76828829 -89821467 - B2_Mm2 SINE B2 -102 114 48 4 1171 267 133 0 0 chrX 76829060 76829105 -89821191 + (GGGA)n Simple_repeat Simple_repeat 1 45 0 4 1171 407 144 18 18 chrX 76829182 76829295 -89821001 + (TA)n Simple_repeat Simple_repeat 2 114 0 4 1171 26 0 0 0 chrX 76831190 76831216 -89819080 + AT_rich Low_complexity Low_complexity 1 26 0 4 1171 234 206 94 16 chrX 76831726 76831790 -89818506 + MER57D LTR ERV1 330 398 -13 4 1171 244 407 0 34 chrX 76832551 76832668 -89817628 - Lx8 LINE L1 -347 7126 7014 4 1171 1115 95 0 0 chrX 76832890 76833037 -89817259 - B1_Mm SINE Alu 0 147 1 4 1171 1303 85 28 0 chrX 76833054 76833230 -89817066 + B2_Mm2 SINE B2 1 181 -14 4 1171 29 0 0 0 chrX 76834751 76834780 -89815516 + AT_rich Low_complexity Low_complexity 1 29 0 4 1171 21 57 0 0 chrX 76834957 76834992 -89815304 + AT_rich Low_complexity Low_complexity 1 35 0 4 1171 3871 34 9 0 chrX 76834992 76835457 -89814839 - L1Md_F3 LINE L1 -17 6567 6099 4 1171 6963 106 19 1 chrX 76835465 76836489 -89813807 - Lx3A LINE L1 -6 6975 5934 5 1171 1287 19 6 13 chrX 76836489 76836647 -89813649 + Lx3A LINE L1 5775 5931 -1050 5 1171 295 261 130 31 chrX 76836943 76837105 -89813191 - Lx8 LINE L1 -26 7447 7270 5 1171 495 226 0 0 chrX 76837419 76837534 -89812762 - Lx7 LINE L1 -15 7681 7567 5 1171 4235 99 24 0 chrX 76837528 76838142 -89812154 + L1_Mus3 LINE L1 6010 6638 0 5 1171 22 0 0 0 chrX 76838335 76838357 -89811939 + AT_rich Low_complexity Low_complexity 1 22 0 5 1171 7032 198 40 24 chrX 76838372 76840890 -89809406 - Lx5 LINE L1 -13 7037 4471 5 1171 183 156 0 0 chrX 76841374 76841406 -89808890 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 1171 1869 114 96 17 chrX 76842610 76842912 -89807384 - ORR1A2 LTR MaLR -1 326 1 5 1171 5428 180 41 19 chrX 76842957 76843724 -89806572 - Lx2B LINE L1 -6 6994 6202 5 1171 3050 63 5 10 chrX 76843724 76844122 -89806174 + MTA_Mm LTR MaLR 1 396 0 5 1171 5428 180 41 19 chrX 76844122 76844418 -89805878 - Lx2B LINE L1 -799 6201 5907 5 1171 2565 139 103 28 chrX 76844419 76844916 -89805380 + L1_Mur2 LINE L1 4380 4913 -964 5 1171 21 57 0 0 chrX 76844916 76844951 -89805345 + AT_rich Low_complexity Low_complexity 1 35 0 5 1171 23 33 0 0 chrX 76845102 76845132 -89805164 + AT_rich Low_complexity Low_complexity 1 30 0 5 1171 21 0 0 0 chrX 76845331 76845352 -89804944 + AT_rich Low_complexity Low_complexity 1 21 0 5 1171 1184 246 57 0 chrX 76846238 76846535 -89803761 - Lx7 LINE L1 -705 6991 6678 5 1171 210 71 0 0 chrX 76846546 76846574 -89803722 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 5 1171 1251 279 13 16 chrX 76846574 76846952 -89803344 + Lx7 LINE L1 7039 7415 -281 5 1171 229 294 10 10 chrX 76846974 76847077 -89803219 + Lx7 LINE L1 7571 7673 -23 5 1171 272 354 53 9 chrX 76847589 76847703 -89802593 + PB1D9 SINE Alu 2 120 0 5 1171 1968 204 146 43 chrX 76847853 76848407 -89801889 - RMER19C LTR ERVK 0 611 1 5 1171 1313 84 21 62 chrX 76848516 76848757 -89801539 - Lx3_Mus LINE L1 0 7009 6779 5 1171 1682 108 2 2 chrX 76848757 76849005 -89801291 - Lx3_Mus LINE L1 -568 6441 6173 5 1171 235 282 63 19 chrX 76849041 76849200 -89801096 + L1MB7 LINE L1 5767 5932 -242 5 1171 282 246 52 30 chrX 76849214 76849348 -89800948 + L1MB7 LINE L1 5994 6130 -54 5 1171 295 209 30 0 chrX 76849469 76849536 -89800760 - B4 SINE B4 -210 82 14 5 1171 522 318 35 17 chrX 76849940 76850113 -89800183 - RMER12 LTR ERVK -2 1320 1145 5 1171 1423 244 118 25 chrX 76850232 76850673 -89799623 - RMER12 LTR ERVK -93 1229 748 5 1171 2424 113 16 42 chrX 76850680 76851106 -89799190 + RLTR9F LTR ERVK 1 415 0 5 1171 198 118 0 0 chrX 76851114 76851148 -89799148 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 5 1171 3465 187 47 15 chrX 76851152 76851878 -89798418 - RMER12 LTR ERVK -573 749 1 5 1171 9240 165 34 70 chrX 76851878 76853576 -89796720 + L1_Mur2 LINE L1 660 2331 -3546 5 1171 414 0 0 0 chrX 76853576 76853622 -89796674 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1171 9240 153 39 78 chrX 76853622 76854370 -89795926 + L1_Mur2 LINE L1 2332 2989 -2888 5 1171 1165 41 14 7 chrX 76854370 76854516 -89795780 + B1_Mm SINE Alu 1 147 0 5 1171 9240 153 39 78 chrX 76854516 76854788 -89795508 + L1_Mur2 LINE L1 2990 3274 -2603 5 1171 251 279 0 0 chrX 76854782 76854843 -89795453 - Lx6 LINE L1 -997 6463 6403 5 1171 219 36 0 0 chrX 76854853 76854881 -89795415 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 5 1171 883 75 0 0 chrX 76854913 76855033 -89795263 + B1_Mus1 SINE Alu 28 147 -1 5 1171 191 36 0 35 chrX 76855036 76855065 -89795231 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1171 40528 13 1 6 chrX 76855641 76861837 -89788459 - L1Md_A LINE L1 0 6582 423 5 1171 350 325 47 59 chrX 76862989 76863159 -89787137 - LTR68 LTR ERV1 -564 176 9 5 1171 200 167 0 20 chrX 76863191 76863240 -89787056 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1171 339 25 0 0 chrX 76863267 76863307 -89786989 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1171 212 220 0 20 chrX 76863307 76863358 -89786938 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 1171 396 55 0 0 chrX 76863371 76863426 -89786870 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 5 1171 216 0 0 0 chrX 76863428 76863452 -89786844 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 1171 5602 102 26 2 chrX 76863510 76864356 -89785940 + Lx3A LINE L1 6113 6978 -3 5 1171 3003 123 65 0 chrX 76864420 76864916 -89785380 + Lx4A LINE L1 5785 6312 -746 5 1171 979 94 0 0 chrX 76864943 76865081 -89785215 - B1_Mus1 SINE Alu -4 144 7 5 1171 4424 152 16 16 chrX 76865096 76865847 -89784449 + Lx4A LINE L1 6305 7055 -3 5 1171 198 247 78 52 chrX 76866083 76866160 -89784136 + L4 LINE RTE 1347 1425 -604 5 1171 1325 232 7 32 chrX 76866280 76866565 -89783731 - RMER1B Other Other -386 680 403 5 1171 1433 192 67 130 chrX 76866480 76866941 -89783355 + RMER1B Other Other 630 1061 -5 5 1171 478 308 88 33 chrX 76867087 76867302 -89782994 + ORR1E LTR MaLR 6 232 -127 5 1171 21 57 0 0 chrX 76867529 76867564 -89782732 + AT_rich Low_complexity Low_complexity 1 35 0 5 1171 737 42 11 0 chrX 76868084 76868179 -89782117 + B1_Mus2 SINE Alu 52 147 0 5 1171 25 31 0 0 chrX 76868500 76868532 -89781764 + AT_rich Low_complexity Low_complexity 1 32 0 5 1171 352 279 44 88 chrX 76870494 76870608 -89779688 + Lx8 LINE L1 7181 7289 -184 5 1171 29 28 0 0 chrX 76870662 76870698 -89779598 + AT_rich Low_complexity Low_complexity 1 36 0 5 1171 23 0 0 0 chrX 76870951 76870974 -89779322 + AT_rich Low_complexity Low_complexity 1 23 0 5 1171 2490 59 6 12 chrX 76871054 76871395 -89778901 - L1_Mus3 LINE L1 -2 6636 6298 5 1171 270 0 0 0 chrX 76871487 76871517 -89778779 + (TAA)n Simple_repeat Simple_repeat 1 30 0 5 1171 515 74 12 0 chrX 76871601 76871682 -89778614 + (TG)n Simple_repeat Simple_repeat 1 82 0 5 1171 938 205 51 0 chrX 76873530 76873725 -89776571 - MTD LTR MaLR 0 419 215 5 1171 906 228 0 30 chrX 76873729 76873928 -89776368 + ORR1C2 LTR MaLR 3 195 -189 5 1171 1474 112 44 67 chrX 76873908 76874206 -89776090 + ORR1C2-int LTR MaLR 1216 1506 -3 5 1171 1267 209 83 4 chrX 76874204 76874507 -89775789 + ORR1C2 LTR MaLR 1 384 0 5 1171 446 320 2 4 chrX 76874507 76874635 -89775661 - MTD LTR MaLR -204 217 78 5 1171 30 27 0 0 chrX 76874749 76874786 -89775510 + AT_rich Low_complexity Low_complexity 1 37 0 5 1171 874 293 29 48 chrX 76874862 76875114 -89775182 + Lx9 LINE L1 6365 6621 -1023 5 1171 1130 55 14 0 chrX 76875114 76875259 -89775037 - B1_Mus2 SINE Alu 0 147 1 5 1171 874 293 29 48 chrX 76875259 76875318 -89774978 + Lx9 LINE L1 6622 6670 -974 5 1171 216 261 0 0 chrX 76875698 76875767 -89774529 + T-rich Low_complexity Low_complexity 1 69 0 5 1171 568 324 54 84 chrX 76877385 76877550 -89772746 + Lx9 LINE L1 6659 6834 -810 5 1171 4045 53 16 8 chrX 76877550 76878065 -89772231 + MURVY-LTR LTR ERV1 1 519 0 5 1171 568 324 54 84 chrX 76878065 76878270 -89772026 + Lx9 LINE L1 6835 7018 -626 5 1171 491 311 19 19 chrX 76878282 76878436 -89771860 + Lx8 LINE L1 7189 7342 -131 5 1171 301 125 0 86 chrX 76878433 76878503 -89771793 + Lx3A LINE L1 6915 6978 -3 5 1171 4472 220 38 40 chrX 76878544 76879675 -89770621 + Lx9 LINE L1 6514 7642 -2 5 1171 456 235 168 36 chrX 76879901 76880038 -89770258 + B3A SINE B2 6 160 -38 5 1171 353 207 0 11 chrX 76880039 76880127 -89770169 + (TA)n Simple_repeat Simple_repeat 1 87 0 5 1171 923 133 0 39 chrX 76880162 76880318 -89769978 - B1_Mur4 SINE Alu 0 150 1 5 1171 1023 95 0 0 chrX 76881026 76881163 -89769133 - B1_Mm SINE Alu -6 141 5 5 1171 1976 203 48 29 chrX 76882005 76882425 -89767871 + Lx5 LINE L1 6616 7043 -7 5 1171 655 273 53 10 chrX 76882771 76882978 -89767318 + B3 SINE B2 1 216 0 5 1171 29 60 0 0 chrX 76883870 76883920 -89766376 + AT_rich Low_complexity Low_complexity 1 50 0 5 1171 216 97 0 0 chrX 76884528 76884559 -89765737 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5 1171 243 61 0 0 chrX 76884629 76884662 -89765634 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 5 1171 660 182 0 0 chrX 76884668 76884778 -89765518 - B1_Mur3 SINE Alu -7 142 33 5 1171 22 0 0 0 chrX 76884800 76884822 -89765474 + AT_rich Low_complexity Low_complexity 1 22 0 5 1171 2231 240 50 28 chrX 76885598 76886134 -89764162 - Lx6 LINE L1 -1 7459 6912 5 1171 507 187 125 1 chrX 76886139 76886265 -89764031 + L1_Mur3 LINE L1 4997 5165 -715 5 1171 2274 169 20 36 chrX 76886277 76886719 -89763577 + L1_Mur3 LINE L1 5305 5739 -141 5 1171 268 174 0 0 chrX 76886752 76886798 -89763498 + Lx5 LINE L1 6528 6573 -477 5 1171 368 344 145 20 chrX 76887058 76887307 -89762989 + MLT1E2 LTR MaLR 340 619 -8 5 1171 1362 56 73 0 chrX 76887445 76887605 -89762691 + B2_Mm1t SINE B2 1 160 -33 5 1171 342 0 0 0 chrX 76887605 76887643 -89762653 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 5 1171 1362 56 73 0 chrX 76887643 76887661 -89762635 + B2_Mm1t SINE B2 161 191 -2 5 1171 267 359 39 0 chrX 76887680 76887783 -89762513 + B1F2 SINE Alu 1 107 -42 5 1171 279 140 0 0 chrX 76887962 76888012 -89762284 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 5 1171 932 282 64 43 chrX 76888206 76888535 -89761761 + Lx8 LINE L1 7006 7341 -132 5 1171 450 329 28 33 chrX 76888649 76888863 -89761433 + L1MD2 LINE L1 5364 5576 -783 5 1171 345 271 101 25 chrX 76888993 76889152 -89761144 + L1MD2 LINE L1 5675 5845 -514 5 1171 391 299 127 24 chrX 76889145 76889477 -89760819 + L1MD2 LINE L1 5756 6121 -238 5 1171 259 277 12 0 chrX 76889741 76889824 -89760472 + MLT1D LTR MaLR 422 505 0 5 1171 30 0 0 0 chrX 76889867 76889897 -89760399 + AT_rich Low_complexity Low_complexity 1 30 0 5 1171 2506 81 20 0 chrX 76890217 76890400 -89759896 + MTB LTR MaLR 1 184 -216 5 1171 2215 60 0 0 chrX 76890400 76890684 -89759612 + L1Md_F2 LINE L1 6298 6581 -1 5 1171 2506 81 20 0 chrX 76890684 76890844 -89759452 + MTB LTR MaLR 185 349 -51 5 1171 261 119 0 0 chrX 76891027 76891069 -89759227 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1171 32 81 0 0 chrX 76891217 76891291 -89759005 + AT_rich Low_complexity Low_complexity 1 74 0 5 1171 208 98 0 47 chrX 76891586 76891629 -89758667 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 5 1171 23 0 0 0 chrX 76892006 76892029 -89758267 + AT_rich Low_complexity Low_complexity 1 23 0 5 1171 33 0 0 0 chrX 76892154 76892187 -89758109 + AT_rich Low_complexity Low_complexity 1 33 0 5 1171 314 253 199 43 chrX 76892231 76892417 -89757879 - RMER15 LTR ERVL -14 561 347 5 1171 1619 107 7 11 chrX 76892465 76892739 -89757557 + BGLII LTR ERVK 149 421 0 5 1171 405 0 0 0 chrX 76892944 76892989 -89757307 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 5 1171 1050 52 8 0 chrX 76892989 76893123 -89757173 - B1_Mus1 SINE Alu -10 138 4 6 1171 1058 200 46 71 chrX 76895361 76895711 -89754585 - Lx9 LINE L1 -6 7638 7298 6 1171 288 340 93 0 chrX 76895813 76895975 -89754321 - L1_Rod LINE L1 -6904 268 92 6 1171 1616 223 19 0 chrX 76896036 76896355 -89753941 + Lx9 LINE L1 6611 6935 -709 6 1171 1338 198 15 184 chrX 76896372 76896835 -89753461 - RLTR23 LTR ERV1 -45 385 1 6 1171 2684 218 36 44 chrX 76897129 76897850 -89752446 + Lx9 LINE L1 6924 7638 -6 6 1171 293 0 0 26 chrX 76898221 76898259 -89752037 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1171 621 255 32 6 chrX 76898639 76898797 -89751499 + Lx8 LINE L1 7181 7342 -131 6 1171 210 150 0 0 chrX 76899431 76899471 -89750825 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1171 210 263 18 0 chrX 76899471 76899528 -89750768 + GA-rich Low_complexity Low_complexity 1 58 0 6 1171 189 171 0 0 chrX 76899947 76899982 -89750314 + GA-rich Low_complexity Low_complexity 3 37 0 6 1171 228 342 8 51 chrX 76900408 76900525 -89749771 - MER5A1 DNA MER1_type 0 166 55 6 1171 253 311 55 36 chrX 76901534 76901644 -89748652 + LTR48 LTR ERV1 42 153 -634 6 1171 631 289 6 59 chrX 76902143 76902312 -89747984 - RSINE1 SINE B4 0 165 6 6 1171 606 231 0 8 chrX 76903049 76903167 -89747129 + B1_Mur2 SINE Alu 32 148 -1 6 1171 206 148 0 53 chrX 76903777 76903834 -89746462 + T-rich Low_complexity Low_complexity 2 55 0 6 1171 7832 42 0 3 chrX 76903838 76905061 -89745235 - L1Md_A LINE L1 -11 6571 5355 6 1171 12466 83 1 5 chrX 76905056 76907414 -89742882 + L1_Mus2 LINE L1 4219 6565 -1 6 1171 921 227 65 84 chrX 76907427 76907735 -89742561 + Lx5 LINE L1 6746 7047 -3 6 1171 252 303 0 84 chrX 76909470 76909553 -89740743 + PB1D10 SINE Alu 13 88 -29 6 1171 209 83 28 0 chrX 76909596 76909632 -89740664 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 6 1171 512 14 0 52 chrX 76910152 76910229 -89740067 - L1Md_F3 LINE L1 -13 6571 6499 6 1171 249 342 68 43 chrX 76910230 76910392 -89739904 - Tigger10 DNA Tigger -1036 807 642 6 1171 866 302 127 42 chrX 76910904 76911281 -89739015 - MTD LTR MaLR -10 409 1 6 1171 596 267 95 30 chrX 76912955 76913187 -89737109 - L1MC1 LINE L1 -19 6314 6068 6 1171 245 208 229 0 chrX 76913204 76913300 -89736996 - L1MC1 LINE L1 -363 5970 5853 6 1171 1323 132 99 2 chrX 76913309 76913579 -89736717 - ORR1A2 LTR MaLR 0 394 1 6 1171 5734 124 32 14 chrX 76913579 76914479 -89735817 - ORR1A2-int LTR MaLR 0 1963 1048 6 1171 9023 97 33 5 chrX 76914479 76914919 -89735377 + Lx2 LINE L1 5639 6079 -918 6 1171 252 0 0 0 chrX 76914919 76914947 -89735349 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1171 9023 97 33 5 chrX 76914947 76915824 -89734472 + Lx2 LINE L1 6080 6992 -5 6 1171 999 239 203 36 chrX 76915988 76916266 -89734030 - Lx5 LINE L1 -714 6336 5988 6 1171 1495 55 4 99 chrX 76916266 76916509 -89733787 - L1_Mus2 LINE L1 0 6566 6347 6 1171 999 239 203 36 chrX 76916509 76916643 -89733653 - Lx5 LINE L1 -1063 5987 5855 6 1171 284 275 31 62 chrX 76916688 76916816 -89733480 - RMER20B LTR ERVK -12 615 492 6 1171 474 229 143 43 chrX 76916872 76917082 -89733214 - RMER20B LTR ERVK -273 354 124 6 1171 1564 140 0 73 chrX 76917213 76917514 -89732782 - Lx5 LINE L1 -1176 5874 5596 6 1171 912 284 89 22 chrX 76917522 76917846 -89732450 + Lx8 LINE L1 6943 7288 -185 6 1171 309 51 0 0 chrX 76917850 76917889 -89732407 + (GGA)n Simple_repeat Simple_repeat 3 41 0 6 1171 4117 97 22 27 chrX 76917889 76918528 -89731768 + L1_Mus3 LINE L1 5998 6633 -5 6 1171 368 305 125 21 chrX 76918713 76918857 -89731439 - RSINE1 SINE B4 -4 161 3 6 1171 337 339 95 83 chrX 76918943 76919299 -89730997 - ORR1E LTR MaLR -3 376 1 6 1171 5564 191 65 40 chrX 76920013 76920974 -89729322 + Lx5 LINE L1 5758 6776 -274 6 1171 3421 30 0 0 chrX 76920974 76921370 -89728926 + MTA_Mm LTR MaLR 1 396 0 6 1171 5564 189 65 42 chrX 76921370 76921660 -89728636 + Lx5 LINE L1 6777 7047 -3 6 1171 5113 142 21 3 chrX 76921765 76922762 -89727534 - Lx2B LINE L1 -559 6441 5425 6 1171 711 246 47 5 chrX 76922741 76922980 -89727316 - L1_Mur2 LINE L1 -1464 4682 4424 6 1171 1304 263 13 10 chrX 76922980 76923283 -89727013 + Lx6 LINE L1 7033 7336 -124 6 1171 726 248 22 18 chrX 76923316 76923565 -89726731 - L1_Mur2 LINE L1 -1452 4428 4174 6 1171 278 183 71 24 chrX 76923585 76923669 -89726627 - Lx6 LINE L1 -28 7432 7345 6 1171 4064 198 26 20 chrX 76923684 76923925 -89726371 - L1_Mur2 LINE L1 -2886 2994 2751 6 1171 2660 34 61 3 chrX 76923925 76924252 -89726044 + ORR1A1 LTR MaLR 1 346 0 6 1171 4064 198 26 20 chrX 76924252 76924972 -89725324 - L1_Mur2 LINE L1 -3130 2750 2027 6 1171 353 249 4 228 chrX 76925019 76925136 -89725160 - L1_Mur2 LINE L1 -3818 2059 1951 6 1171 1218 28 7 0 chrX 76925136 76925281 -89725015 + B1_Mm SINE Alu 2 147 0 6 1171 465 197 1 80 chrX 76925281 76925418 -89724878 - L1_Mur2 LINE L1 -3928 1952 1862 6 1171 6871 76 8 3 chrX 76925461 76926368 -89723928 + L1_Mus2 LINE L1 5650 6560 -6 6 1171 300 222 0 0 chrX 76926398 76926461 -89723835 - L1_Mur2 LINE L1 -4073 1807 1745 6 1171 2007 136 6 69 chrX 76926463 76926525 -89723771 - ORR1A2 LTR MaLR -2 325 287 6 1171 5891 54 0 4 chrX 76926525 76927268 -89723028 - L1Md_F2 LINE L1 -2 6580 5841 6 1171 2007 136 6 69 chrX 76927268 76927552 -89722744 - ORR1A2 LTR MaLR -41 286 1 6 1171 2007 206 38 57 chrX 76927552 76928471 -89721825 - L1_Mur2 LINE L1 -4131 1749 863 6 1171 1431 201 69 11 chrX 76929140 76929502 -89720794 - L1_Mur3 LINE L1 -1695 4185 3803 6 1171 966 139 0 122 chrX 76930095 76930308 -89719988 + Lx4B LINE L1 6868 7054 -4 6 1171 216 225 0 0 chrX 76930509 76930549 -89719747 + ID2 SINE ID 11 50 -33 6 1171 11464 98 23 69 chrX 76930550 76931106 -89719190 + RLTR22_Mur LTR ERVK 1 556 -1292 6 1171 1174 56 0 0 chrX 76931106 76931249 -89719047 + B1_Mus1 SINE Alu 2 144 -4 6 1171 11464 98 23 69 chrX 76931249 76932629 -89717667 + RLTR22_Mur LTR ERVK 557 1848 0 6 1171 22 35 0 0 chrX 76932670 76932699 -89717597 + AT_rich Low_complexity Low_complexity 1 29 0 6 1171 24 32 0 0 chrX 76932738 76932769 -89717527 + AT_rich Low_complexity Low_complexity 1 31 0 6 1171 24 0 0 0 chrX 76932868 76932892 -89717404 + AT_rich Low_complexity Low_complexity 1 24 0 6 1171 265 345 76 90 chrX 76933342 76933459 -89716837 - MLT1E1A LTR MaLR -45 635 532 6 1171 462 18 0 0 chrX 76933459 76933514 -89716782 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 1171 265 345 76 90 chrX 76933514 76933619 -89716677 - MLT1E1A LTR MaLR -149 531 418 6 1171 2695 14 5 157 chrX 76933705 76934138 -89716158 + IAPLTR1_Mm LTR ERVK 1 367 0 6 1171 6943 112 54 87 chrX 76934138 76935488 -89714808 + IAPEz-int LTR ERVK 8 1313 -5168 6 1171 28793 21 1 1 chrX 76935487 76938758 -89711538 + IAPEz-int LTR ERVK 3210 6481 0 6 1171 2695 14 5 157 chrX 76938758 76939191 -89711105 + IAPLTR1_Mm LTR ERVK 1 367 0 6 1172 320 191 61 45 chrX 76939905 76940087 -89710209 + RMER6D LTR ERVK 174 377 -313 6 1172 481 193 0 108 chrX 76940283 76940440 -89709856 - L1_Rod LINE L1 -2624 3223 3084 6 1172 333 0 0 0 chrX 76940614 76940651 -89709645 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1172 3822 240 60 16 chrX 76940658 76941569 -89708727 - Lx7 LINE L1 -285 7411 6461 6 1172 416 288 173 11 chrX 76942364 76942624 -89707672 + L1MB1 LINE L1 5843 6144 -45 6 1172 7276 45 7 0 chrX 76942890 76943791 -89706505 - L1Md_F3 LINE L1 -15 6569 5663 6 1172 227 300 24 127 chrX 76943732 76943858 -89706438 + LTR90B LTR LTR 141 253 -543 6 1172 2211 56 0 0 chrX 76943858 76944146 -89706150 + L1Md_F2 LINE L1 5299 5586 -297 6 1172 7959 55 2 2 chrX 76944146 76945141 -89705155 + L1Md_F2 LINE L1 5587 6581 -1 6 1172 202 214 24 0 chrX 76947215 76947257 -89703039 + CT-rich Low_complexity Low_complexity 4 46 0 6 1172 1351 234 47 47 chrX 76947259 76947725 -89702571 - Lx7 LINE L1 -174 7522 7057 6 1172 616 210 34 17 chrX 76948169 76948348 -89701948 + L1_Mur3 LINE L1 1412 1593 -4287 6 1172 295 255 18 9 chrX 76948338 76948449 -89701847 - L1_Mur3 LINE L1 -1186 4694 4583 6 1172 334 271 59 7 chrX 76948445 76948597 -89701699 - L1_Mur3 LINE L1 -4477 1403 1244 6 1172 1096 99 0 0 chrX 76948601 76948742 -89701554 + B1_Mus2 SINE Alu 1 141 -6 6 1172 229 68 0 43 chrX 76948744 76948790 -89701506 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 6 1172 267 290 126 22 chrX 76948807 76949029 -89701267 - L1_Mur3 LINE L1 -6463 1265 1021 6 1172 456 112 18 53 chrX 76949110 76949223 -89701073 - L1Md_T LINE L1 0 6582 6474 6 1172 3272 156 49 54 chrX 76949224 76950135 -89700161 + RLTR13D1 LTR ERVK 16 855 0 6 1172 7082 52 1 8 chrX 76950135 76951524 -89698772 - L1Md_F2 LINE L1 -92 6490 5120 6 1172 306 0 0 0 chrX 76951542 76951576 -89698720 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1172 1125 95 0 0 chrX 76951576 76951724 -89698572 - B1_Mus1 SINE Alu 0 148 1 6 1172 355 273 9 0 chrX 76951742 76951852 -89698444 - L1_Mur3 LINE L1 -6762 966 856 6 1172 726 258 38 17 chrX 76952133 76952370 -89697926 + Lx9 LINE L1 5510 5751 -96 6 1172 527 312 98 0 chrX 76952381 76952554 -89697742 + B3 SINE B2 3 192 -24 6 1172 1684 324 52 19 chrX 76952594 76953644 -89696652 + Lx9 LINE L1 5781 6994 -650 6 1172 1034 94 24 151 chrX 76953645 76953857 -89696439 + B2_Mm2 SINE B2 1 185 -10 6 1172 739 321 56 97 chrX 76953895 76954284 -89696012 + MER92A LTR ERV1 19 397 -15 6 1172 222 37 0 0 chrX 76954284 76954311 -89695985 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1172 861 95 103 0 chrX 76954311 76954437 -89695859 - B1_Mus1 SINE Alu -9 139 1 6 1172 739 321 56 97 chrX 76954437 76954457 -89695839 + MER92A LTR ERV1 398 411 -1 6 1172 202 205 0 0 chrX 76954498 76954537 -89695759 + CT-rich Low_complexity Low_complexity 1 39 0 6 1172 529 267 62 41 chrX 76954538 76954733 -89695563 - MLT1B LTR MaLR -49 341 143 6 1172 321 229 0 0 chrX 76954784 76954845 -89695451 - MLT1B LTR MaLR -329 61 1 6 1172 2368 131 13 53 chrX 76954919 76955313 -89694983 - ORR1C1 LTR MaLR 0 378 1 6 1172 761 244 57 9 chrX 76955589 76955800 -89694496 + Lx9 LINE L1 7245 7465 -179 6 1172 294 95 0 0 chrX 76955803 76955845 -89694451 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1172 381 158 74 0 chrX 76955864 76955959 -89694337 + Lx9 LINE L1 7542 7643 -1 6 1172 67 42 0 0 chrX 76956676 76956771 -89693525 + AT_rich Low_complexity Low_complexity 1 95 0 6 1172 36613 42 0 3 chrX 76957045 76963552 -89686744 - L1Md_T LINE L1 0 6585 1 6 1172 376 297 13 20 chrX 76963616 76963767 -89686529 - Lx6 LINE L1 -15 7445 7296 6 1172 5907 112 106 6 chrX 76964114 76965082 -89685214 - Lx2 LINE L1 -1 6996 5932 6 1172 276 170 21 0 chrX 76965082 76965129 -89685167 + 5S rRNA rRNA 9 56 -65 6 1172 342 329 43 49 chrX 76965456 76965619 -89684677 - L1MC3 LINE L1 -128 7657 7496 6 1172 284 255 31 0 chrX 76965726 76965824 -89684472 + Lx9 LINE L1 7524 7624 -20 6 1172 1067 164 49 121 chrX 76966376 76966723 -89683573 - RLTRETN_Mm LTR ERVK 0 322 1 6 1172 1182 283 59 0 chrX 76966991 76967298 -89682998 + MTD LTR MaLR 10 334 -85 6 1172 1054 137 6 12 chrX 76967322 76967492 -89682804 + ORR1A2 LTR MaLR 118 286 -41 6 1172 6339 109 10 53 chrX 76967492 76968126 -89682170 + L1VL2 LINE L1 14 656 -5679 6 1172 1635 21 0 15 chrX 76968126 76968321 -89681975 + B2_Mm1a SINE B2 2 193 0 6 1172 12541 107 12 47 chrX 76968321 76968661 -89681635 + L1VL2 LINE L1 657 961 -2654 6 1172 1185 48 0 0 chrX 76968661 76968806 -89681490 + B1_Mm SINE Alu 3 147 0 6 1172 12541 97 19 20 chrX 76968806 76970675 -89679621 + L1VL2 LINE L1 962 2830 -785 6 1172 207 0 0 0 chrX 76970675 76970698 -89679598 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1172 12541 97 19 20 chrX 76970698 76970844 -89679452 + L1VL2 LINE L1 2831 2987 -628 6 1172 323 225 12 36 chrX 76970933 76971016 -89679280 + MTD LTR MaLR 339 419 0 6 1172 450 306 34 27 chrX 76971390 76971538 -89678758 - RSINE1 SINE B4 0 165 17 7 1172 2979 59 13 3 chrX 76971714 76972106 -89678190 + MTA_Mm LTR MaLR 1 396 0 7 1172 3884 188 17 14 chrX 76972306 76973140 -89677156 + Lx5 LINE L1 6154 6996 -62 7 1172 29 0 0 0 chrX 76973155 76973184 -89677112 + AT_rich Low_complexity Low_complexity 1 29 0 7 1172 258 303 152 0 chrX 76973199 76973377 -89676919 + B3 SINE B2 1 205 -11 7 1172 2305 67 46 3 chrX 76973509 76973837 -89676459 + L1_Mus1 LINE L1 6144 6485 -82 7 1172 1483 79 5 5 chrX 76974956 76975160 -89675136 + L1_Mus1 LINE L1 6364 6567 0 7 1172 24 0 0 0 chrX 76975396 76975420 -89674876 + AT_rich Low_complexity Low_complexity 1 24 0 7 1172 211 28 56 0 chrX 76975480 76975516 -89674780 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 7 1172 775 166 258 0 chrX 76975818 76975981 -89674315 + B3 SINE B2 2 206 -10 7 1172 22 35 0 0 chrX 76975981 76976010 -89674286 + AT_rich Low_complexity Low_complexity 1 29 0 7 1172 21 0 0 0 chrX 76976024 76976045 -89674251 + AT_rich Low_complexity Low_complexity 1 21 0 7 1172 621 257 7 0 chrX 76976718 76976858 -89673438 + B1_Mus1 SINE Alu 3 143 -5 7 1172 22 0 0 0 chrX 76977912 76977934 -89672362 + AT_rich Low_complexity Low_complexity 1 22 0 7 1172 211 320 28 34 chrX 76979071 76979181 -89671115 + MIRm SINE MIR 55 159 -49 7 1172 1409 276 65 18 chrX 76979188 76979575 -89670721 + MTD LTR MaLR 1 405 -14 7 1172 1139 241 37 32 chrX 76979605 76980029 -89670267 + RMER10B LTR ERVL 15 398 0 7 1172 6395 84 32 1 chrX 76981070 76982004 -89668292 + Lx3_Mus LINE L1 5645 6607 -402 7 1172 1486 97 21 135 chrX 76982004 76982337 -89667959 - RLTR10A LTR ERVK 0 411 117 7 1172 1876 90 98 9 chrX 76982393 76982708 -89667588 + Lx3_Mus LINE L1 6601 6943 -66 7 1172 396 59 0 0 chrX 76982999 76983050 -89667246 + (TA)n Simple_repeat Simple_repeat 2 52 0 7 1172 243 0 0 0 chrX 76983050 76983076 -89667220 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 1172 420 20 0 0 chrX 76983140 76983189 -89667107 + (T)n Simple_repeat Simple_repeat 1 49 0 7 1172 36284 31 1 0 chrX 76983204 76990239 -89660057 - L1Md_T LINE L1 0 6585 1 7 1172 232 246 31 0 chrX 76990490 76990555 -89659741 - RLTR28B LTR ERVL -133 348 282 7 1172 387 152 108 54 chrX 76990554 76990665 -89659631 - RLTR28B LTR ERVL -364 117 1 7 1172 1515 184 16 3 chrX 76990781 76991105 -89659191 - Lx2 LINE L1 -94 6903 6277 7 1172 6877 113 16 4 chrX 76991103 76992298 -89657998 + Lx2 LINE L1 5426 6634 -363 7 1172 418 304 47 72 chrX 76992299 76992504 -89657792 + L1M4 LINE L1 3399 3592 -2554 7 1172 1885 155 45 0 chrX 76992504 76992839 -89657457 + Lx2 LINE L1 6648 6997 0 7 1172 418 304 47 72 chrX 76992839 76993019 -89657277 + L1M4 LINE L1 3593 3774 -2372 7 1172 663 327 66 27 chrX 76993040 76993298 -89656998 + B4 SINE B4 8 275 -17 7 1172 285 89 0 0 chrX 76993342 76993387 -89656909 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1172 255 261 113 30 chrX 76993462 76993659 -89656637 + L1M4 LINE L1 3893 4118 -2028 7 1172 584 339 99 14 chrX 76993951 76994173 -89656123 - L1M4 LINE L1 -4966 1576 1342 7 1172 1644 219 16 24 chrX 76994173 76994548 -89655748 - ORR1D1 LTR MaLR 0 374 3 7 1172 584 339 99 14 chrX 76994548 76994759 -89655537 - L1M4 LINE L1 -5201 1341 1107 7 1172 1732 166 49 86 chrX 76994827 76995235 -89655061 + RLTR9C LTR ERVK 1 393 0 7 1172 602 288 126 7 chrX 76995313 76995422 -89654874 + MTEb LTR MaLR 71 183 -196 7 1172 3993 47 34 8 chrX 76995422 76995617 -89654679 - RLTR1B LTR ERV1 0 512 321 7 1172 198 0 0 0 chrX 76995617 76995639 -89654657 + (CTGGGG)n Simple_repeat Simple_repeat 1 22 0 7 1172 3993 47 34 8 chrX 76995639 76995942 -89654354 - RLTR1B LTR ERV1 -192 320 2 7 1172 602 288 126 7 chrX 76995942 76996101 -89654195 + MTEb LTR MaLR 184 370 -9 7 1172 304 278 67 40 chrX 76996130 76996280 -89654016 - L1M4 LINE L1 -5568 974 821 7 1172 874 114 24 27 chrX 76996396 76996548 -89653748 + LTRIS2 LTR ERV1 373 564 0 7 1172 1376 274 65 16 chrX 76996942 76997447 -89652849 + L1MA6 LINE L1 5657 6186 -114 7 1172 5831 148 50 13 chrX 76997449 76998503 -89651793 - Lx2B LINE L1 -14 6986 5894 7 1172 234 0 0 0 chrX 76998626 76998652 -89651644 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 1172 21 0 0 0 chrX 76999604 76999625 -89650671 + AT_rich Low_complexity Low_complexity 1 21 0 7 1172 678 260 116 65 chrX 76999724 77000000 -89650296 - Lx8 LINE L1 -312 7161 6872 7 1172 2156 207 76 11 chrX 77000426 77001054 -89649242 + Lx4B LINE L1 6256 6972 -28 1 1172 306 0 0 0 chrX 77001054 77001088 -89649208 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 2 1172 243 0 0 0 chrX 77001154 77001181 -89649115 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1172 1807 237 66 2 chrX 77001200 77001594 -89648702 - MTC LTR MaLR 0 421 3 4 1172 799 129 0 0 chrX 77001694 77001810 -89648486 - Lx4A LINE L1 -146 6912 6797 5 1172 381 70 0 0 chrX 77001854 77001911 -89648385 + (CATA)n Simple_repeat Simple_repeat 4 60 0 6 1172 180 0 0 0 chrX 77002095 77002115 -89648181 + (T)n Simple_repeat Simple_repeat 1 20 0 7 1172 1076 96 0 0 chrX 77002115 77002261 -89648035 - B1_Mus1 SINE Alu 0 148 3 8 1172 9060 78 2 0 chrX 77002281 77003496 -89646800 - L1_Mm LINE L1 -315 5568 4351 9 1172 1007 242 66 31 chrX 77003492 77004291 -89646005 - L1VL1 LINE L1 -5657 1067 213 1 1172 30 0 0 0 chrX 77004673 77004703 -89645593 + AT_rich Low_complexity Low_complexity 1 30 0 1 1172 336 323 70 36 chrX 77006024 77006326 -89643970 - Charlie4a DNA MER1_type -87 421 110 1 1172 288 164 26 26 chrX 77007189 77007302 -89642994 + (TA)n Simple_repeat Simple_repeat 2 114 0 1 1172 334 176 0 13 chrX 77007481 77007556 -89642740 - L1MEe LINE L1 -4541 313 240 1 1172 391 169 112 0 chrX 77007560 77007649 -89642647 - MTD LTR MaLR 0 419 321 1 1172 262 222 18 132 chrX 77008462 77008628 -89641668 - L1MA9 LINE L1 -4 6308 6162 1 1172 297 388 10 0 chrX 77008996 77009094 -89641202 + B3A SINE B2 2 100 -98 1 1172 1201 41 7 0 chrX 77009413 77009559 -89640737 + B1_Mm SINE Alu 1 147 0 1 1172 212 31 62 0 chrX 77009560 77009592 -89640704 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 1 1172 7862 156 6 19 chrX 77009656 77011614 -89638682 + Lx2A LINE L1 4935 6871 -137 2 1172 605 178 0 0 chrX 77011614 77011704 -89638592 - B1_Mus2 SINE Alu -56 91 2 2 1172 526 89 32 53 chrX 77011705 77011800 -89638496 + Lx2A LINE L1 6874 6966 -42 2 1172 447 63 38 0 chrX 77011803 77011882 -89638414 + Lx2A LINE L1 6918 6999 -9 2 1172 24 53 0 0 chrX 77011882 77011920 -89638376 + AT_rich Low_complexity Low_complexity 1 38 0 2 1172 273 146 0 0 chrX 77012061 77012109 -89638187 + (TGGA)n Simple_repeat Simple_repeat 3 50 0 2 1172 2146 96 15 61 chrX 77012364 77012707 -89637589 - ORR1A2 LTR MaLR 0 327 1 2 1172 2210 151 86 0 chrX 77012707 77013092 -89637204 - ORR1A2-int LTR MaLR 0 1963 1546 2 1172 648 0 0 0 chrX 77013094 77013166 -89637130 + (TTC)n Simple_repeat Simple_repeat 2 73 0 2 1172 1572 167 44 106 chrX 77013166 77013507 -89636789 - RLTR41 LTR ERV1 -65 381 62 2 1172 7453 51 4 1 chrX 77013694 77014712 -89635584 + L1Md_F2 LINE L1 5491 6511 -71 2 1172 216 0 0 0 chrX 77014743 77014767 -89635529 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1172 528 262 55 28 chrX 77014769 77014965 -89635331 - MuRRS4-int LTR ERV1 -221 4842 4663 3 1172 2408 310 83 48 chrX 77015783 77017443 -89632853 - MuRRS4-int LTR ERV1 -1043 4020 2302 3 1172 292 268 0 44 chrX 77017502 77017592 -89632704 - MuLV-int LTR ERV1 -4149 3457 3372 3 1172 257 292 0 0 chrX 77017614 77017679 -89632617 - MuLV-int LTR ERV1 -4347 3259 3195 3 1172 1783 161 50 6 chrX 77017760 77018097 -89632199 - ORR1A2-int LTR MaLR -1611 352 1 2 1172 1565 170 27 59 chrX 77018097 77018435 -89631861 - ORR1A2 LTR MaLR 0 327 1 2 1172 256 207 0 49 chrX 77018868 77018929 -89631367 + 4.5SRNA scRNA scRNA 29 86 -8 3 1172 533 75 126 21 chrX 77018882 77018962 -89631334 + B1_Mus2 SINE Alu 43 134 -13 3 1172 894 121 0 13 chrX 77018962 77019113 -89631183 + L1Md_F2 LINE L1 6432 6580 -2 3 1172 533 75 126 21 chrX 77019113 77019127 -89631169 + B1_Mus2 SINE Alu 135 147 0 3 1172 22 70 0 0 chrX 77020115 77020158 -89630138 + AT_rich Low_complexity Low_complexity 1 43 0 3 1172 2615 212 134 80 chrX 77020268 77021083 -89629213 - Lx7 LINE L1 -4 7692 6834 3 1172 3274 173 56 40 chrX 77021104 77021968 -89628328 - L1_Mur3 LINE L1 -4449 1431 551 3 1172 417 39 0 0 chrX 77022467 77022518 -89627778 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1172 261 0 0 0 chrX 77022518 77022546 -89627750 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 1172 33 43 0 0 chrX 77023019 77023066 -89627230 + AT_rich Low_complexity Low_complexity 1 47 0 4 1172 23 68 0 0 chrX 77023108 77023152 -89627144 + AT_rich Low_complexity Low_complexity 1 44 0 4 1172 25 51 0 0 chrX 77023287 77023326 -89626970 + AT_rich Low_complexity Low_complexity 1 39 0 4 1172 28 0 0 0 chrX 77023554 77023582 -89626714 + AT_rich Low_complexity Low_complexity 1 28 0 4 1172 814 173 22 34 chrX 77023711 77023890 -89626406 + B2_Mm2 SINE B2 1 177 -18 4 1172 353 135 27 0 chrX 77023890 77023964 -89626332 + (TAAA)n Simple_repeat Simple_repeat 2 77 0 4 1172 972 85 35 0 chrX 77023983 77024124 -89626172 + B1_Mm SINE Alu 1 146 -1 4 1172 333 102 0 0 chrX 77024885 77024944 -89625352 + (T)n Simple_repeat Simple_repeat 1 59 0 4 1172 1167 81 0 0 chrX 77024944 77025092 -89625204 - B1_Mus1 SINE Alu 0 148 1 4 1172 800 147 16 33 chrX 77025277 77025407 -89624889 + polypyrimidine Low_complexity Low_complexity 50 180 0 4 1172 1208 88 9 0 chrX 77025407 77025757 -89624539 + (TTTC)n Simple_repeat Simple_repeat 1 353 0 5 1172 800 147 16 33 chrX 77025757 77025808 -89624488 + polypyrimidine Low_complexity Low_complexity 2 49 0 5 1172 954 161 0 0 chrX 77025808 77025982 -89624314 + CT-rich Low_complexity Low_complexity 1 174 0 5 1172 235 320 88 50 chrX 77026171 77026352 -89623944 - B3A SINE B2 0 198 11 5 1172 463 306 35 71 chrX 77026191 77026360 -89623936 - RSINE1 SINE B4 0 165 3 5 1172 420 69 268 0 chrX 77026428 77026519 -89623777 - L1_Mus1 LINE L1 -3 6579 6465 5 1172 2068 89 3 36 chrX 77026529 77026779 -89623517 - L1_Mus1 LINE L1 -4 6563 6323 5 1172 1500 59 0 0 chrX 77026779 77026966 -89623330 - B2_Mm1a SINE B2 -5 188 2 5 1172 2068 89 3 36 chrX 77026966 77027018 -89623278 - L1_Mus1 LINE L1 -245 6322 6271 5 1172 1240 249 34 30 chrX 77027792 77028090 -89622206 - MTD LTR MaLR -8 411 113 5 1172 1436 40 51 0 chrX 77028098 77028275 -89622021 - B2_Mm1t SINE B2 -7 186 1 5 1172 405 0 0 0 chrX 77028290 77028335 -89621961 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1172 3737 150 23 18 chrX 77028335 77028994 -89621302 + Lx2 LINE L1 6336 6997 0 6 1172 3609 169 29 0 chrX 77029022 77029813 -89620483 + L1_Mur1 LINE L1 1107 1920 -1992 6 1172 4899 185 78 69 chrX 77029812 77030990 -89619306 + Lx3C LINE L1 5786 6974 -2 6 1172 1299 114 123 0 chrX 77031013 77031240 -89619056 - L1_Mur2 LINE L1 -1426 4451 4197 6 1172 353 117 0 0 chrX 77031241 77031301 -89618995 + L1_Mus4 LINE L1 6561 6620 -16 6 1172 202 229 0 0 chrX 77031304 77031352 -89618944 + A-rich Low_complexity Low_complexity 1 48 0 6 1172 36437 55 1 24 chrX 77031426 77037104 -89613192 + L1Md_T LINE L1 104 5586 -297 6 1172 7947 58 0 0 chrX 77037104 77038100 -89612196 + L1Md_T LINE L1 5587 6582 0 6 1172 2620 17 0 0 chrX 77038112 77038411 -89611885 + L1Md_T LINE L1 5288 5586 -297 6 1172 8000 57 0 0 chrX 77038411 77039432 -89610864 + L1Md_T LINE L1 5587 6582 0 6 1172 405 0 0 0 chrX 77039537 77039582 -89610714 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1172 195 69 0 0 chrX 77041381 77041410 -89608886 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1172 361 280 104 22 chrX 77041546 77041681 -89608615 - Lx6 LINE L1 -27 7433 7288 7 1172 2259 218 10 14 chrX 77041808 77042328 -89607968 - L1_Mur3 LINE L1 -627 5253 4736 7 1172 833 265 154 16 chrX 77042336 77042719 -89607577 - RCHARR1 DNA MER1_type -29 945 510 7 1172 22612 105 7 4 chrX 77042726 77046871 -89603425 - L1Md_F2 LINE L1 -19 6563 2403 7 1172 707 230 14 117 chrX 77046868 77047090 -89603206 - L1VL1 LINE L1 -5998 424 226 7 1172 2802 200 63 18 chrX 77047091 77047810 -89602486 - L1_Mur3 LINE L1 -2634 3246 2496 7 1172 289 261 0 54 chrX 77048213 77048306 -89601990 + GA-rich Low_complexity Low_complexity 4 91 0 7 1172 288 262 77 36 chrX 77048558 77048780 -89601516 - L1MCa LINE L1 -4094 2414 2184 7 1172 423 284 86 27 chrX 77048975 77049263 -89601033 - L1MC LINE L1 -3134 3012 2700 7 1172 333 0 0 0 chrX 77049263 77049300 -89600996 + (TATG)n Simple_repeat Simple_repeat 2 38 0 7 1172 423 284 86 27 chrX 77049300 77049417 -89600879 - L1MC LINE L1 -3447 2699 2583 7 1172 22 0 0 0 chrX 77049563 77049585 -89600711 + AT_rich Low_complexity Low_complexity 1 22 0 8 1172 4448 238 50 23 chrX 77049773 77050800 -89599496 - Lx6 LINE L1 -4 7456 6403 8 1172 547 298 170 4 chrX 77050849 77051102 -89599194 - L1_Mur3 LINE L1 -7329 399 105 7 1172 325 328 52 18 chrX 77051128 77051457 -89598839 - L1MCa LINE L1 -5129 1379 1040 8 1172 857 266 62 25 chrX 77051459 77051689 -89598607 + ORR1D2 LTR MaLR 15 253 -121 8 1172 1044 332 83 18 chrX 77051690 77052294 -89598002 - L1MCa LINE L1 -5864 644 2 8 1172 1430 67 10 0 chrX 77052939 77053132 -89597164 - L1Md_F2 LINE L1 -11 6571 6377 8 1172 795 268 76 85 chrX 77053464 77053794 -89596502 - MLT1A0 LTR MaLR -2 363 37 8 1172 204 97 0 0 chrX 77054066 77054097 -89596199 + (TTG)n Simple_repeat Simple_repeat 2 32 0 8 1172 689 266 125 31 chrX 77054728 77054984 -89595312 + Lx9 LINE L1 6771 7050 -594 8 1172 1341 63 1 6 chrX 77055009 77055193 -89595103 - IAPEY2_LTR LTR ERVK 0 357 144 8 1172 3035 90 9 5 chrX 77055194 77055616 -89594680 - IAPEY3-int LTR ERVK -350 7330 6907 8 1172 480 51 0 0 chrX 77055616 77055675 -89594621 - IAPEY3-int LTR ERVK -2770 4910 4852 8 1172 3524 63 9 0 chrX 77055668 77056110 -89594186 - IAPEY3-int LTR ERVK -4991 2689 2244 8 1172 24415 44 2 21 chrX 77056114 77059257 -89591039 + L1Md_F3 LINE L1 2504 5586 -297 9 1172 7717 50 16 1 chrX 77059257 77060239 -89590057 + L1Md_F3 LINE L1 5587 6583 -1 9 1172 550 315 73 76 chrX 77060390 77060706 -89589590 + RLTR18 LTR ERVK 1 315 -301 9 1172 654 349 29 35 chrX 77060751 77061066 -89589230 + RLTR18B LTR ERVK 193 505 -7 9 1172 25 51 0 0 chrX 77061523 77061562 -89588734 + AT_rich Low_complexity Low_complexity 1 39 0 9 1172 363 306 121 28 chrX 77061729 77061847 -89588449 - L1MA4A LINE L1 -389 5914 5772 9 1172 365 0 22 0 chrX 77061847 77061892 -89588404 + (TA)n Simple_repeat Simple_repeat 2 47 0 9 1172 363 306 121 28 chrX 77061892 77062022 -89588274 - L1MA4A LINE L1 -532 5771 5643 9 1172 631 192 6 88 chrX 77062434 77062594 -89587702 - B1_Mur1 SINE Alu -2 147 1 9 1172 247 209 29 15 chrX 77062739 77062807 -89587489 + (AATAG)n Simple_repeat Simple_repeat 1 69 0 9 1172 2391 47 7 0 chrX 77062897 77063197 -89587099 + L1Md_F2 LINE L1 6279 6580 -2 9 1172 259 148 37 0 chrX 77063527 77063581 -89586715 - Lx2B LINE L1 -1 6999 6944 9 1172 1680 221 158 57 chrX 77063611 77064212 -89586084 - RLTR40 LTR ERVK 0 817 156 1 1172 301 415 61 22 chrX 77064306 77064535 -89585761 + MLT1F1 LTR MaLR 6 243 -326 1 1172 334 290 137 34 chrX 77064603 77064778 -89585518 + B3A SINE B2 3 195 -3 1 1172 324 235 78 10 chrX 77064791 77064894 -89585402 + L1MA8 LINE L1 5816 5925 -366 1 146 35383 37 0 0 chrX 77064903 77070577 -89579719 + L1Md_T LINE L1 1 5589 -297 1 1173 8939 7 0 0 chrX 77070577 77071573 -89578723 + L1Md_T LINE L1 5590 6585 0 1 1173 325 271 94 22 chrX 77071644 77071825 -89578471 + L1MA8 LINE L1 6045 6238 -53 1 1173 664 314 48 36 chrX 77071927 77072178 -89578118 + MLT1F1 LTR MaLR 308 561 -8 1 1173 1471 119 140 11 chrX 77072810 77073004 -89577292 + Lx LINE L1 6304 6518 -136 1 1173 189 0 0 0 chrX 77073004 77073025 -89577271 + (TGGG)n Simple_repeat Simple_repeat 1 21 0 1 1173 1471 135 138 13 chrX 77073025 77073126 -89577170 + Lx LINE L1 6519 6632 -4 1 1173 625 270 42 42 chrX 77073199 77073342 -89576954 + B1_Mur1 SINE Alu 1 143 -6 1 1173 455 236 0 14 chrX 77073342 77073488 -89576808 + GA-rich Low_complexity Low_complexity 1 144 0 1 1173 23 33 0 0 chrX 77073647 77073677 -89576619 + AT_rich Low_complexity Low_complexity 1 30 0 1 1173 383 263 25 25 chrX 77073792 77073913 -89576383 + L1MB1 LINE L1 5827 5947 -242 1 1173 210 208 0 0 chrX 77074899 77074947 -89575349 + CT-rich Low_complexity Low_complexity 1 48 0 1 1173 398 200 41 65 chrX 77075031 77075154 -89575142 - Lx5 LINE L1 -11 7039 6920 1 1173 5329 181 12 4 chrX 77075143 77076325 -89573971 - Lx5 LINE L1 -448 6602 5405 1 1173 1168 81 17 0 chrX 77076347 77076520 -89573776 + (TTTTC)n Simple_repeat Simple_repeat 3 178 0 1 1173 1077 110 0 0 chrX 77076524 77076669 -89573627 - B1_Mus1 SINE Alu -2 146 2 1 1173 1040 251 78 32 chrX 77077320 77077822 -89572474 - L1MA4 LINE L1 -424 5876 5352 1 1173 22 0 0 0 chrX 77077854 77077876 -89572420 + AT_rich Low_complexity Low_complexity 1 22 0 1 1173 1522 325 80 49 chrX 77077951 77078711 -89571585 - Lx8 LINE L1 -61 7412 6629 1 1173 253 253 40 33 chrX 77078708 77078859 -89571437 - L1MA4 LINE L1 -868 5275 5124 1 1173 722 294 6 17 chrX 77078938 77079118 -89571178 - B4A SINE B4 -20 272 95 1 1173 592 276 156 0 chrX 77079130 77079380 -89570916 - L1MA4 LINE L1 -985 5158 4870 1 1173 210 71 0 0 chrX 77079817 77079845 -89570451 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 1 1173 5405 130 16 64 chrX 77080785 77081250 -89569046 - RLTR13D6 LTR ERVK 0 902 471 1 1173 3920 149 104 8 chrX 77081250 77081988 -89568308 + RMER17D2 LTR ERVK 1 809 0 1 1173 5405 130 16 64 chrX 77081988 77082470 -89567826 - RLTR13D6 LTR ERVK -432 470 1 1 1173 258 323 110 10 chrX 77082771 77082871 -89567425 - PB1D7 SINE Alu -1 119 10 1 1173 254 336 26 26 chrX 77083882 77084035 -89566261 - MIR SINE MIR -34 228 76 1 1173 407 240 0 80 chrX 77084360 77084473 -89565823 + MTD LTR MaLR 6 109 -310 1 1173 28572 127 9 9 chrX 77084473 77090827 -89559469 + L1_Mus3 LINE L1 279 6637 -1 1 1173 805 293 156 10 chrX 77090827 77091134 -89559162 + MTD LTR MaLR 68 419 0 1 1173 317 345 73 0 chrX 77091134 77091244 -89559052 - B1_Mur1 SINE Alu -30 119 2 1 1173 378 0 0 0 chrX 77091872 77091914 -89558382 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1173 3534 83 6 14 chrX 77092285 77092776 -89557520 - RLTR1C LTR ERV1 -16 487 1 1 1173 507 318 45 11 chrX 77092777 77092955 -89557341 - ORR1D2 LTR MaLR -186 184 1 1 1173 4287 275 41 41 chrX 77092955 77094186 -89556110 - ORR1D2-int LTR MaLR -2 1368 139 1 1173 1121 301 39 8 chrX 77094263 77094622 -89555674 - ORR1D2 LTR MaLR 0 370 1 1 1173 402 180 79 0 chrX 77094625 77094714 -89555582 + MTE2a LTR MaLR 284 379 0 1 1173 734 322 65 11 chrX 77094847 77095108 -89555188 - MTD LTR MaLR -14 405 131 1 1173 2607 287 83 60 chrX 77095105 77096101 -89554195 - MTC-int LTR MaLR -204 1054 36 1 1173 988 290 133 16 chrX 77096120 77096495 -89553801 - MTD LTR MaLR 0 419 1 1 1173 342 0 0 0 chrX 77096498 77096536 -89553760 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1173 369 0 0 0 chrX 77096536 77096577 -89553719 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1173 301 278 10 10 chrX 77096643 77096741 -89553555 - MTEb LTR MaLR -4 375 278 1 1173 202 418 10 0 chrX 77097190 77097293 -89553003 + L2a LINE L2 3322 3425 -1 1 1173 180 0 0 0 chrX 77098081 77098101 -89552195 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 1173 424 286 54 0 chrX 77099513 77099625 -89550671 + RSINE1 SINE B4 2 119 -46 1 1173 285 277 15 0 chrX 77100042 77100107 -89550189 + C-rich Low_complexity Low_complexity 3 68 0 1 1173 39034 65 1 22 chrX 77100429 77107510 -89542786 - L1Md_T LINE L1 0 6582 99 1 1173 1649 232 70 3 chrX 77108442 77108814 -89541482 - Lx5 LINE L1 0 7050 6654 1 1173 328 204 198 30 chrX 77109411 77109512 -89540784 + RLTR25B LTR ERVK 392 509 -519 1 1173 889 105 0 0 chrX 77109430 77109554 -89540742 + B1_Mus1 SINE Alu 24 147 -1 1 1173 369 299 43 86 chrX 77109433 77109572 -89540724 + B4 SINE B4 111 243 -49 1 1173 360 0 0 0 chrX 77109743 77109783 -89540513 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1173 189 213 0 0 chrX 77109997 77110044 -89540252 + A-rich Low_complexity Low_complexity 5 51 0 1 1173 889 163 13 0 chrX 77111248 77111397 -89538899 + RLTR24 LTR ERV1 1 151 -378 1 1173 1353 117 60 5 chrX 77111397 77111612 -89538684 - MTB_Mm LTR MaLR 0 407 181 1 1173 4677 66 79 2 chrX 77111628 77112260 -89538036 - L1_Mus2 LINE L1 0 6566 5886 1 1173 2837 39 2 119 chrX 77112260 77112673 -89537623 + RLTR10B2 LTR ERVK 1 365 0 1 1173 6717 67 38 5 chrX 77112673 77113192 -89537104 - L1_Mus2 LINE L1 -675 5891 5368 1 1173 1116 97 23 3 chrX 77113192 77113364 -89536932 - MTB_Mm LTR MaLR -235 184 1 1 1173 1196 264 54 64 chrX 77113364 77113751 -89536545 + RLTR24 LTR ERV1 147 529 0 1 1173 2845 79 8 10 chrX 77114117 77114514 -89535782 + MTA_Mm LTR MaLR 1 396 0 1 1173 963 219 183 4 chrX 77117327 77117584 -89532712 + RMER5 LTR ERV1 17 319 -215 1 1173 1067 159 14 38 chrX 77118003 77118212 -89532084 + RMER5 LTR ERV1 304 507 -27 1 1173 221 0 35 0 chrX 77118223 77118252 -89532044 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 1 1173 201 74 0 0 chrX 77118424 77118451 -89531845 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 1173 366 23 0 0 chrX 77118451 77118493 -89531803 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 1173 924 133 0 34 chrX 77118961 77119109 -89531187 - B1_Mus1 SINE Alu 0 148 6 1 1173 5457 136 21 13 chrX 77119419 77120364 -89529932 - Lx LINE L1 0 6654 5702 1 1173 4435 14 0 0 chrX 77120737 77121230 -89529066 + MT2_Mm LTR ERVL 1 493 0 1 1173 222 37 0 0 chrX 77121390 77121417 -89528879 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1 1173 22 35 0 0 chrX 77123233 77123262 -89527034 + AT_rich Low_complexity Low_complexity 1 29 0 1 1173 210 71 0 0 chrX 77123798 77123826 -89526470 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1 1173 400 198 0 30 chrX 77123841 77123940 -89526356 - Lx4B LINE L1 -46 7012 6917 1 1173 696 90 4 2 chrX 77123940 77124062 -89526234 - B1_Mus2 SINE Alu -23 124 2 1 1173 341 218 0 94 chrX 77123980 77124076 -89526220 - MT2B LTR ERVL -361 240 154 1 1173 1401 175 26 4 chrX 77124118 77124388 -89525908 - Lx4B LINE L1 -648 6410 6135 1 1173 914 138 0 12 chrX 77124435 77124596 -89525700 + CT-rich Low_complexity Low_complexity 3 161 0 1 1173 407 224 5 38 chrX 77124742 77124928 -89525368 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 1 1173 2306 122 11 21 chrX 77124939 77125316 -89524980 + L1_Mus4 LINE L1 6259 6631 -5 1 1173 420 282 0 4 chrX 77125326 77125568 -89524728 + (CATATA)n Simple_repeat Simple_repeat 1 240 0 1 1173 266 148 19 0 chrX 77125601 77125655 -89524641 + (CATA)n Simple_repeat Simple_repeat 2 56 0 1 1173 1501 53 5 0 chrX 77127081 77127270 -89523026 + B2_Mm1t SINE B2 1 190 -3 1 1173 269 262 9 18 chrX 77127378 77127487 -89522809 - Lx9 LINE L1 0 7644 7537 1 1173 462 129 94 0 chrX 77127481 77127566 -89522730 - Lx3_Mus LINE L1 -238 6771 6679 1 1173 180 0 0 0 chrX 77127684 77127704 -89522592 + (TTCC)n Simple_repeat Simple_repeat 1 20 0 1 1173 1149 79 0 28 chrX 77127706 77127888 -89522408 + (TCCC)n Simple_repeat Simple_repeat 2 178 0 1 1173 357 24 0 0 chrX 77127888 77127929 -89522367 + (TTTC)n Simple_repeat Simple_repeat 4 45 0 1 1173 185 0 40 0 chrX 77127947 77127972 -89522324 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1173 1054 102 0 0 chrX 77127972 77128109 -89522187 - B1_Mus1 SINE Alu -10 138 2 1 1173 654 295 36 50 chrX 77129462 77129683 -89520613 + ID_B1 SINE B4 6 223 -1 1 1173 2640 204 19 19 chrX 77129761 77130285 -89520011 - RMER15 LTR ERVL 0 575 52 1 1173 225 0 0 0 chrX 77130308 77130333 -89519963 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1 1173 920 326 8 30 chrX 77130472 77130868 -89519428 - Lx7 LINE L1 -401 7295 6909 1 1173 24 0 0 0 chrX 77131069 77131093 -89519203 + AT_rich Low_complexity Low_complexity 1 24 0 1 1173 726 130 58 0 chrX 77131171 77131309 -89518987 + Lx LINE L1 6507 6652 -2 1 1173 285 29 0 0 chrX 77133266 77133300 -89516996 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 1173 6973 159 29 10 chrX 77133397 77134880 -89515416 - Lx3C LINE L1 -1 6975 5465 1 1173 481 278 7 0 chrX 77134872 77135016 -89515280 - L1_Mur1 LINE L1 -6073 909 765 1 1173 225 260 29 48 chrX 77135147 77135252 -89515044 - L1_Mur1 LINE L1 -6231 751 649 1 1173 3371 66 2 7 chrX 77135938 77136398 -89513898 - L1_Mm LINE L1 -288 5595 5138 1 1173 9307 166 74 21 chrX 77136395 77138398 -89511898 + L1_Mm LINE L1 2927 5035 -848 1 1173 22565 91 159 6 chrX 77138393 77142719 -89507577 + L1Md_A LINE L1 217 5584 -299 1 1173 7435 65 17 2 chrX 77142719 77143700 -89506596 + L1Md_F2 LINE L1 5587 6582 0 1 1173 16060 198 42 19 chrX 77143700 77144137 -89506159 + L1Md_A LINE L1 5014 5467 -419 1 1173 2115 219 64 23 chrX 77144146 77144910 -89505386 + L1Md_F LINE L1 219 1026 -5511 1 1173 6715 97 13 10 chrX 77144951 77146378 -89503918 + L1_Mus2 LINE L1 5123 6564 -2 1 1173 6603 123 9 1 chrX 77146390 77147574 -89502722 + L1_Mus4 LINE L1 5441 6632 -4 1 1173 585 192 4 1 chrX 77149580 77149691 -89500605 + Lx5 LINE L1 6611 6731 -327 1 1173 1169 219 68 27 chrX 77150189 77150484 -89499812 + Lx5 LINE L1 6736 7042 -8 1 1173 189 121 0 0 chrX 77150575 77150608 -89499688 + (CATA)n Simple_repeat Simple_repeat 3 35 0 1 1173 286 303 0 43 chrX 77150610 77150703 -89499593 + MER21B LTR ERV1 433 521 -342 1 1173 228 241 0 134 chrX 77150776 77150843 -89499453 - MER66C LTR ERV1 -42 513 456 1 1173 222 37 0 0 chrX 77151014 77151041 -89499255 + (TCTCTG)n Simple_repeat Simple_repeat 4 30 0 1 1173 450 0 0 0 chrX 77151049 77151099 -89499197 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1173 301 83 125 0 chrX 77151755 77151802 -89498494 - ORR1B1 LTR MaLR 0 394 342 2 1173 1861 271 29 109 chrX 77151802 77152461 -89497835 - RMER19C LTR ERVK 0 611 6 2 1173 31638 110 19 15 chrX 77152470 77158776 -89491520 - L1Md_F2 LINE L1 -3 6579 250 2 1173 1809 200 23 17 chrX 77158778 77159124 -89491172 - ORR1B1 LTR MaLR -46 348 1 2 1173 24 0 0 0 chrX 77159236 77159260 -89491036 + AT_rich Low_complexity Low_complexity 1 24 0 2 1173 6610 129 15 3 chrX 77159317 77160552 -89489744 - Lx LINE L1 -1 6653 5404 2 1173 405 0 0 0 chrX 77160677 77160722 -89489574 + (CAAAT)n Simple_repeat Simple_repeat 2 46 0 2 1173 478 289 6 32 chrX 77160864 77161021 -89489275 + RMER1B Other Other 11 163 -903 2 1173 622 269 45 17 chrX 77161132 77161310 -89488986 + LTRIS4 LTR ERV1 325 507 0 2 1173 440 289 67 128 chrX 77161312 77161836 -89488460 + MuRRS4-int LTR ERV1 5 496 -4567 2 1173 956 217 81 1 chrX 77162245 77162507 -89487789 + MuRRS4-int LTR ERV1 374 618 -4445 2 1173 4283 141 24 18 chrX 77162891 77163657 -89486639 + RMER16-int LTR ERVK 677 1446 -3960 2 1173 529 155 98 18 chrX 77163645 77163757 -89486539 + MuRRS4-int LTR ERV1 752 872 -4191 2 1173 658 201 26 20 chrX 77163757 77163909 -89486387 - LSU-rRNA_Hsa rRNA rRNA -1366 3669 3517 2 1173 243 203 188 0 chrX 77163908 77163972 -89486324 - LSU-rRNA_Hsa rRNA rRNA -1763 3272 3197 2 1173 1540 241 119 12 chrX 77163997 77164492 -89485804 + MuRRS4-int LTR ERV1 897 1444 -3619 2 1173 906 136 305 51 chrX 77164549 77164844 -89485452 + MuRRS4-int LTR ERV1 1650 2019 -3044 2 1173 2463 251 27 20 chrX 77165005 77165709 -89484587 + MuRRS4-int LTR ERV1 3563 4271 -792 2 1173 682 229 126 0 chrX 77165700 77165914 -89484382 + MuRRS4-int LTR ERV1 4788 5028 -35 2 1173 341 21 62 0 chrX 77165915 77165963 -89484333 + (CAAAA)n Simple_repeat Simple_repeat 5 55 0 2 1173 1192 63 31 164 chrX 77165963 77166189 -89484107 + LTRIS2 LTR ERV1 25 220 -344 2 1173 757 294 21 27 chrX 77166196 77166531 -89483765 + MuRRS4-int LTR ERV1 4700 5032 -31 2 1173 524 256 61 29 chrX 77166758 77166940 -89483356 + LTRIS4 LTR ERV1 275 512 -116 2 1173 36156 14 0 10 chrX 77166940 77172121 -89478175 + L1Md_A LINE L1 463 5586 -297 2 1173 8640 19 1 7 chrX 77172121 77173123 -89477173 + L1Md_A LINE L1 5587 6582 0 2 1173 614 193 64 40 chrX 77173208 77173381 -89476915 - RMER1A Other Other -34 996 820 2 1173 659 127 0 10 chrX 77173384 77173487 -89476809 + RMER10B LTR ERVL 1 102 -296 2 1173 337 263 110 10 chrX 77173495 77173595 -89476701 - PB1D10 SINE Alu 0 117 8 2 1173 618 256 8 0 chrX 77173515 77173636 -89476660 - ID_B1 SINE B4 -56 168 47 2 1173 409 283 36 45 chrX 77173607 77173718 -89476578 - ID_B1 SINE B4 -105 119 10 2 1173 2593 211 89 36 chrX 77173754 77174397 -89475899 - RMER13B LTR ERVK -9 899 223 2 1173 6206 104 4 8 chrX 77174689 77175031 -89475265 - L1_Mus3 LINE L1 0 6638 6301 2 1173 4956 136 59 15 chrX 77175031 77175895 -89474401 - RLTR13D6 LTR ERVK 0 902 1 2 1173 6206 104 4 8 chrX 77175895 77176487 -89473809 - L1_Mus3 LINE L1 -338 6300 5707 2 1173 1828 120 0 0 chrX 77176483 77176759 -89473537 + L1_Mus3 LINE L1 5433 5708 -175 2 1173 25 65 0 0 chrX 77177141 77177187 -89473109 + AT_rich Low_complexity Low_complexity 1 46 0 2 1173 752 256 65 95 chrX 77177202 77177508 -89472788 + ORR1E LTR MaLR 3 299 -60 2 1173 618 75 0 0 chrX 77178017 77178110 -89472186 + (CA)n Simple_repeat Simple_repeat 2 94 0 2 1173 387 0 0 0 chrX 77178110 77178152 -89472144 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 1173 565 203 24 0 chrX 77178325 77178448 -89471848 - Lx6 LINE L1 -204 7256 7131 2 1173 803 269 5 0 chrX 77178457 77178658 -89471638 + Lx6 LINE L1 7258 7459 -1 2 1173 951 206 8 12 chrX 77179301 77179547 -89470749 + MERVL_2A-int LTR ERVL 5517 5761 0 2 1173 449 158 3 3 chrX 77179549 77179639 -89470657 + MT2B LTR ERVL 3 92 -441 2 1173 267 249 86 47 chrX 77179611 77179706 -89470590 + MT2B2 LTR ERVL 436 554 -47 2 1173 221 238 32 0 chrX 77179707 77179770 -89470526 + (TA)n Simple_repeat Simple_repeat 2 66 0 2 1173 1160 68 7 0 chrX 77179851 77179997 -89470299 + B1_Mus2 SINE Alu 1 147 0 2 1173 207 0 0 0 chrX 77179997 77180020 -89470276 + (CAAAAA)n Simple_repeat Simple_repeat 6 28 0 2 1173 24 0 0 0 chrX 77180776 77180800 -89469496 + AT_rich Low_complexity Low_complexity 1 24 0 2 1173 216 0 0 0 chrX 77181519 77181543 -89468753 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 2 1173 372 22 0 0 chrX 77181833 77181878 -89468418 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1173 501 32 0 0 chrX 77181878 77181940 -89468356 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 1173 26 64 0 0 chrX 77182043 77182090 -89468206 + AT_rich Low_complexity Low_complexity 1 47 0 2 1173 671 243 12 0 chrX 77182210 77182379 -89467917 - Lx6 LINE L1 -26 7434 7264 2 1173 2594 176 7 14 chrX 77183773 77184216 -89466080 + RLTR21 LTR ERVK 1 440 -1132 2 1173 2351 134 4 95 chrX 77184213 77184674 -89465622 + RLTR21 LTR ERVK 1154 1572 0 2 1173 246 210 24 12 chrX 77185239 77185321 -89464975 - Lx4A LINE L1 0 7058 6976 2 1173 5905 161 44 1 chrX 77185321 77186345 -89463951 + Lx4A LINE L1 5991 7058 0 2 1173 1200 61 0 0 chrX 77187124 77187272 -89463024 + B1_Mus1 SINE Alu 1 148 0 2 1173 2399 193 17 2 chrX 77187452 77187934 -89462362 + L1_Mur1 LINE L1 5398 5886 0 2 1173 2773 137 5 0 chrX 77187945 77188382 -89461914 + Lx2B LINE L1 6320 6758 -242 2 1173 441 187 19 9 chrX 77188388 77188496 -89461800 + Lx2B LINE L1 6880 6988 -12 2 1173 291 177 0 0 chrX 77188590 77188652 -89461644 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 1173 13858 171 57 30 chrX 77189873 77191497 -89458799 + Lx3_Mus LINE L1 46 2075 -3802 2 1173 306 0 0 0 chrX 77191497 77191531 -89458765 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 1173 13858 190 11 34 chrX 77191531 77193369 -89456927 + Lx3_Mus LINE L1 2076 3831 -2046 2 1173 3335 97 8 14 chrX 77193369 77193863 -89456433 + L1_Mus3 LINE L1 6141 6631 -7 2 1173 953 107 0 0 chrX 77193865 77193996 -89456300 + B1_Mm SINE Alu 5 135 -12 2 1173 414 0 0 0 chrX 77193997 77194043 -89456253 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1173 13858 190 11 34 chrX 77194043 77194664 -89455632 + Lx3_Mus LINE L1 3832 4455 -1422 2 1173 31592 64 5 9 chrX 77194663 77199302 -89450994 + L1Md_F3 LINE L1 976 5586 -297 2 1173 8004 42 3 0 chrX 77199303 77200278 -89450018 + L1Md_F3 LINE L1 5588 6565 -19 2 146 8371 105 17 19 chrX 77200291 77201700 -89448596 + Lx3_Mus LINE L1 4522 5923 -1086 2 1174 488 0 0 53 chrX 77201700 77201776 -89448520 + (CAAAC)n Simple_repeat Simple_repeat 2 73 0 2 1174 7975 106 32 30 chrX 77201776 77202781 -89447515 + Lx3_Mus LINE L1 5924 6940 -69 2 1174 3404 62 16 49 chrX 77203362 77203565 -89446731 - MT2C_Mm LTR ERVL 0 475 288 2 1174 1174 61 0 0 chrX 77203565 77203712 -89446584 - B1_Mus1 SINE Alu 0 148 2 2 1174 3404 62 16 49 chrX 77203712 77203999 -89446297 - MT2C_Mm LTR ERVL -188 287 1 2 1174 252 241 34 85 chrX 77203999 77204025 -89446271 - ORR1A3-int LTR MaLR -1350 613 594 2 1174 26 30 0 0 chrX 77204337 77204370 -89445926 + AT_rich Low_complexity Low_complexity 1 33 0 2 1174 1007 266 24 27 chrX 77204460 77204796 -89445500 - Lx5 LINE L1 -1 7459 7125 2 1174 2196 166 125 10 chrX 77204802 77205288 -89445008 + RMER4B LTR ERVK 5 546 -39 2 1174 883 289 52 31 chrX 77205306 77205992 -89444304 - Lx5 LINE L1 -331 7129 6024 2 1174 21 71 0 0 chrX 77206022 77206064 -89444232 + AT_rich Low_complexity Low_complexity 1 42 0 2 1174 2260 116 13 8 chrX 77207190 77207571 -89442725 - Lx5 LINE L1 -1029 6021 5639 2 1174 587 284 24 24 chrX 77207625 77207831 -89442465 + Lx5 LINE L1 6125 6330 -720 2 1174 738 0 0 0 chrX 77207831 77207913 -89442383 + (CAAGG)n Simple_repeat Simple_repeat 4 85 0 2 1174 195 129 0 0 chrX 77207914 77207945 -89442351 + (GGAA)n Simple_repeat Simple_repeat 4 34 0 2 1174 491 267 129 16 chrX 77207957 77208151 -89442145 + B3 SINE B2 1 216 0 2 1174 4188 83 0 2 chrX 77208374 77208926 -89441370 - L1_Mus1 LINE L1 0 6567 6017 2 1174 3892 83 2 42 chrX 77208926 77209653 -89440643 + L1_Mus1 LINE L1 5262 5970 -597 2 1174 438 20 0 0 chrX 77209796 77209847 -89440449 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 2 1174 2510 106 17 0 chrX 77209847 77210264 -89440032 - L1_Mus2 LINE L1 -15 6623 6157 2 1174 1590 124 19 8 chrX 77210259 77210527 -89439769 - L1_Mm LINE L1 -82 5801 5531 2 1174 2824 74 13 15 chrX 77210527 77210593 -89439703 - MTA_Mm LTR MaLR 0 396 331 2 1174 2819 58 3 0 chrX 77210593 77210938 -89439358 + ORR1A1 LTR MaLR 1 346 0 2 1174 2824 74 13 15 chrX 77210938 77211268 -89439028 - MTA_Mm LTR MaLR -66 330 1 2 1174 6155 138 95 20 chrX 77211268 77211341 -89438955 - MTA_Mm-int LTR MaLR 0 1258 1192 2 1174 3483 28 0 0 chrX 77211341 77211736 -89438560 - MTA_Mm LTR MaLR -1 395 1 2 1174 9714 15 0 0 chrX 77211736 77212834 -89437462 - MTA_Mm-int LTR MaLR 0 1098 1 2 1174 3466 33 0 0 chrX 77212834 77213230 -89437066 - MTA_Mm LTR MaLR 0 396 1 2 1174 6155 138 95 20 chrX 77213230 77214322 -89435974 - MTA_Mm-int LTR MaLR -67 1191 5 2 1174 3256 48 8 0 chrX 77214322 77214715 -89435581 - MTA_Mm LTR MaLR 0 396 1 2 1174 3778 137 6 5 chrX 77214717 77215383 -89434913 - L1_Mm LINE L1 -350 5533 4867 2 1174 1729 236 119 113 chrX 77215384 77215496 -89434800 + L1Md_F LINE L1 148 242 -6299 2 1174 253 0 26 26 chrX 77215496 77215534 -89434762 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 2 1174 2514 153 30 61 chrX 77215534 77216802 -89433494 + L1Md_F LINE L1 243 1532 -2285 2 1174 904 217 5 53 chrX 77216917 77217126 -89433170 - RMER6D LTR ERVK 0 720 522 2 1174 21 0 0 0 chrX 77217197 77217218 -89433078 + AT_rich Low_complexity Low_complexity 1 21 0 2 1174 728 82 0 261 chrX 77217879 77218078 -89432218 + B1_Mm SINE Alu 1 147 0 2 1174 6793 93 11 5 chrX 77218642 77220044 -89430252 - L1_Mus1 LINE L1 -3 6564 5154 2 1174 4024 104 3 77 chrX 77220044 77220729 -89429567 - L1Md_F2 LINE L1 -8 6574 5941 2 1174 2418 68 3 0 chrX 77220729 77221101 -89429195 + L1Md_F2 LINE L1 5547 5919 -648 2 1174 7865 121 37 7 chrX 77221097 77222845 -89427451 - L1_Mus1 LINE L1 -3254 2629 1261 2 1174 444 19 0 0 chrX 77222845 77222898 -89427398 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1174 7865 173 92 30 chrX 77222898 77223900 -89426396 - L1_Mus1 LINE L1 -4623 1260 196 2 1174 772 113 0 9 chrX 77224493 77224609 -89425687 - B2_Mm2 SINE B2 -18 177 63 2 1174 659 100 70 0 chrX 77224610 77224710 -89425586 - BC1_Mm scRNA scRNA -45 107 1 2 1174 471 35 0 0 chrX 77224947 77225004 -89425292 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 1174 1527 198 42 3 chrX 77225322 77225657 -89424639 - RLTR11A LTR ERVK 0 528 181 2 1174 534 290 24 41 chrX 77225670 77225839 -89424457 - ORR1D2 LTR MaLR -199 171 6 2 1174 28 71 0 0 chrX 77225971 77226027 -89424269 + AT_rich Low_complexity Low_complexity 1 56 0 2 1174 1048 166 0 54 chrX 77226153 77226357 -89423939 - B2_Mm2 SINE B2 -2 193 1 2 1174 397 365 105 37 chrX 77227085 77227159 -89423137 - L1MDa LINE L1 -6098 535 463 2 1174 5507 48 1 0 chrX 77227159 77227839 -89422457 - L1Md_F2 LINE L1 -12 6570 5890 2 1174 397 365 105 37 chrX 77227839 77228248 -89422048 - L1MDa LINE L1 -6171 462 19 2 1174 22 56 0 0 chrX 77228248 77228284 -89422012 + AT_rich Low_complexity Low_complexity 1 36 0 2 1174 300 263 146 10 chrX 77228716 77228812 -89421484 + B1F1 SINE Alu 26 136 -13 2 1174 252 77 0 0 chrX 77228812 77228851 -89421445 + (CAA)n Simple_repeat Simple_repeat 1 39 0 2 1174 573 317 60 13 chrX 77229115 77229348 -89420948 + Lx7 LINE L1 6200 6443 -1253 2 1174 1104 88 0 7 chrX 77230535 77230683 -89419613 - B1_Mus2 SINE Alu 0 147 1 2 1174 28 91 0 0 chrX 77230690 77230767 -89419529 + AT_rich Low_complexity Low_complexity 1 77 0 2 1174 702 231 15 24 chrX 77231224 77231401 -89418895 - ORR1D2 LTR MaLR 0 379 214 2 1174 783 147 0 13 chrX 77231410 77231559 -89418737 - Lx2A1 LINE L1 -479 6518 6373 2 1174 698 142 0 0 chrX 77231559 77231679 -89418617 + Lx2A1 LINE L1 6880 6999 -9 2 1174 29 60 0 0 chrX 77231679 77231729 -89418567 + AT_rich Low_complexity Low_complexity 1 50 0 2 1174 252 361 58 6 chrX 77231787 77231943 -89418353 + L1MDb LINE L1 102 265 -6368 3 1174 483 167 48 19 chrX 77231960 77232064 -89418232 + RMER19B LTR ERVK 1 107 -795 3 1174 8472 34 1 1 chrX 77232080 77233255 -89417041 - L1Md_F2 LINE L1 -1 6581 5410 3 1174 3454 204 95 12 chrX 77233256 77234017 -89416279 + RMER19B LTR ERVK 72 895 -7 3 1174 374 233 24 48 chrX 77234444 77234570 -89415726 - RMER4B LTR ERVK 0 585 463 3 1174 207 217 0 48 chrX 77234609 77234672 -89415624 + (CAG)n Simple_repeat Simple_repeat 1 60 0 3 1174 929 222 103 0 chrX 77234680 77234914 -89415382 - RMER4B LTR ERVK -310 275 18 3 1174 295 329 58 32 chrX 77235669 77236011 -89414285 + L1MDb LINE L1 1130 1480 -5060 3 1174 369 86 0 0 chrX 77236622 77236680 -89413616 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 1174 222 305 221 31 chrX 77237180 77237434 -89412862 - L2 LINE L2 -1657 1762 1461 3 1174 583 283 116 40 chrX 77237855 77238054 -89412242 - B3 SINE B2 -2 214 1 3 1174 247 299 154 18 chrX 77238123 77238344 -89411952 - Lx8 LINE L1 -3 7470 7220 3 1174 299 341 87 0 chrX 77238470 77238596 -89411700 - Lx8 LINE L1 -254 7219 7083 3 1174 762 132 0 92 chrX 77238596 77238738 -89411558 + B1_Mus2 SINE Alu 2 130 -17 3 1174 3138 69 0 0 chrX 77238738 77239231 -89411065 + L1Md_F2 LINE L1 6175 6582 0 3 1174 202 286 0 0 chrX 77239513 77239583 -89410713 + A-rich Low_complexity Low_complexity 1 70 0 3 1174 25 75 0 0 chrX 77239756 77239809 -89410487 + AT_rich Low_complexity Low_complexity 1 53 0 3 1174 2845 232 44 8 chrX 77240010 77240169 -89410127 - Lx5 LINE L1 0 7050 6885 3 1174 302 0 26 0 chrX 77240169 77240207 -89410089 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1174 2845 232 44 8 chrX 77240207 77240678 -89409618 - Lx5 LINE L1 -166 6884 6397 3 1174 324 0 0 0 chrX 77242401 77242437 -89407859 + (TAA)n Simple_repeat Simple_repeat 1 36 0 3 1174 1616 220 90 3 chrX 77243612 77243999 -89406297 + MTC LTR MaLR 1 421 0 3 1174 342 0 0 0 chrX 77244774 77244812 -89405484 + (CAGAGA)n Simple_repeat Simple_repeat 2 39 0 3 1174 254 202 149 53 chrX 77244812 77244906 -89405390 + Lx7 LINE L1 7592 7694 -2 3 1174 30 0 0 0 chrX 77245571 77245601 -89404695 + AT_rich Low_complexity Low_complexity 1 30 0 3 1174 851 299 39 7 chrX 77245601 77245887 -89404409 - Lx3C LINE L1 -4 6972 6678 3 1174 946 136 7 7 chrX 77245889 77246044 -89404252 + L1_Mur1 LINE L1 2835 2989 -2888 3 1174 2433 35 0 0 chrX 77246043 77246331 -89403965 + L1Md_F3 LINE L1 5299 5586 -297 3 1174 8009 45 11 1 chrX 77246331 77247318 -89402978 + L1Md_F3 LINE L1 5587 6583 -1 3 1174 3810 149 27 6 chrX 77247372 77248087 -89402209 + L1_Mur1 LINE L1 3001 3730 -2156 3 1174 183 184 0 0 chrX 77248217 77248255 -89402041 + CT-rich Low_complexity Low_complexity 3 40 0 3 1174 1735 53 0 4 chrX 77248516 77248743 -89401553 + L1Md_F3 LINE L1 6359 6584 0 3 1174 3000 76 5 2 chrX 77250074 77250469 -89399827 + MTA_Mm LTR MaLR 1 396 0 3 1174 595 102 0 27 chrX 77250615 77250726 -89399570 - L1Md_F2 LINE L1 -10 6572 6465 3 1174 1315 140 9 0 chrX 77251452 77251673 -89398623 + L1_Mur1 LINE L1 3456 3678 -2208 3 1174 750 23 0 0 chrX 77252280 77252368 -89397928 + (GAAAA)n Simple_repeat Simple_repeat 1 88 0 3 1174 2959 220 30 19 chrX 77253143 77253884 -89396412 + RMER3D-int LTR ERVK 2089 2837 -5 3 1174 3611 179 40 8 chrX 77253889 77254559 -89395737 + RLTR17 LTR ERVK 1 692 0 3 1174 481 248 87 48 chrX 77254857 77255065 -89395231 - B3 SINE B2 0 216 1 3 1174 289 332 414 11 chrX 77255204 77255481 -89394815 + MTD LTR MaLR 19 407 -12 3 1174 222 273 15 15 chrX 77255495 77255562 -89394734 + B3A SINE B2 14 80 -118 3 1174 27 0 0 0 chrX 77255681 77255708 -89394588 + AT_rich Low_complexity Low_complexity 1 27 0 3 1174 214 293 32 0 chrX 77256078 77256235 -89394061 + (TA)n Simple_repeat Simple_repeat 1 162 0 3 1174 14540 186 7 47 chrX 77256311 77256869 -89393427 + L1VL4 LINE L1 149 885 -5417 3 1174 2982 88 2 7 chrX 77256869 77257282 -89393014 + L1_Mus2 LINE L1 6156 6566 0 3 1174 14540 114 12 9 chrX 77257282 77259559 -89390737 + L1VL4 LINE L1 886 3179 -380 3 1174 2216 134 23 13 chrX 77259541 77259993 -89390303 + L1_Mus3 LINE L1 6088 6566 0 3 1174 6083 71 53 0 chrX 77260004 77260607 -89389689 - L1_Mm LINE L1 -3264 2619 1971 3 1174 375 23 0 0 chrX 77260607 77260651 -89389645 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 3 1174 6083 71 53 0 chrX 77260651 77260917 -89389379 - L1_Mm LINE L1 -3913 1970 1705 3 1174 20910 148 4 62 chrX 77260913 77265544 -89384752 - L1Md_F2 LINE L1 0 6582 2305 3 1174 3433 25 0 2 chrX 77265544 77265941 -89384355 + MTA_Mm LTR MaLR 1 396 0 3 1174 20910 179 12 56 chrX 77265941 77267506 -89382790 - L1Md_F2 LINE L1 -3582 2304 419 3 1174 2540 316 113 37 chrX 77267496 77268321 -89381975 + Lx8 LINE L1 5974 6871 -602 3 1174 356 0 23 0 chrX 77268321 77268365 -89381931 + (TAA)n Simple_repeat Simple_repeat 2 46 0 3 1174 2540 310 112 35 chrX 77268365 77268934 -89381362 + Lx8 LINE L1 6872 7471 -2 3 1174 464 0 18 0 chrX 77269266 77269322 -89380974 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 3 1174 237 301 0 41 chrX 77269323 77269420 -89380876 - Lx4B LINE L1 -21 7037 6945 3 1174 1692 170 57 20 chrX 77269396 77269745 -89380551 + L1_Mur2 LINE L1 4276 4637 -1240 3 1174 3482 177 62 12 chrX 77269746 77270437 -89379859 - RMER17C-int LTR ERVK -1342 1896 1171 3 1174 1218 274 101 86 chrX 77270471 77271266 -89379030 - RMER17C-int LTR ERVK -2019 1219 413 3 1174 523 191 95 110 chrX 77271320 77271520 -89378776 - RMER17C-int LTR ERVK -3041 197 1 3 1174 1052 217 31 49 chrX 77271520 77271845 -89378451 - RMER17C LTR ERVK 0 410 92 3 1174 925 220 4 20 chrX 77271851 77272106 -89378190 - RMER17C LTR ERVK -159 251 1 3 1174 1327 196 121 0 chrX 77272110 77272390 -89377906 + L1_Mur2 LINE L1 5430 5743 -134 3 1174 258 372 39 10 chrX 77272750 77272853 -89377443 + B1F1 SINE Alu 10 115 -34 3 1174 769 42 0 0 chrX 77272853 77272948 -89377348 + L1Md_T LINE L1 6013 6107 -475 3 1174 4617 35 0 21 chrX 77272948 77273525 -89376771 + L1Md_F2 LINE L1 6018 6582 0 3 1174 407 314 129 10 chrX 77273557 77273762 -89376534 + L1M2 LINE L1 3940 4145 -1735 3 1174 523 375 14 0 chrX 77273994 77274210 -89376086 + Lx8 LINE L1 7093 7311 -162 3 1174 31 44 0 0 chrX 77277382 77277427 -89372869 + AT_rich Low_complexity Low_complexity 1 45 0 3 1174 1038 76 0 77 chrX 77277511 77277667 -89372629 - B1_Mus1 SINE Alu 0 148 5 3 1174 4500 162 59 17 chrX 77278088 77278405 -89371891 + L1_Mur2 LINE L1 3606 3922 -1955 3 1174 2959 86 2 5 chrX 77278405 77278802 -89371494 - MTA_Mm LTR MaLR 0 396 1 3 1174 4500 162 59 17 chrX 77278802 77279440 -89370856 + L1_Mur2 LINE L1 3923 4601 -1276 3 1174 666 68 0 0 chrX 77279442 77279530 -89370766 + (TA)n Simple_repeat Simple_repeat 2 89 0 3 1174 6298 159 86 5 chrX 77279717 77280946 -89369350 + L1_Mus3 LINE L1 1764 3092 -2791 3 1174 10659 135 13 23 chrX 77280946 77283605 -89366691 + L1_Mus3 LINE L1 4008 6629 -9 3 1174 25 65 0 0 chrX 77284067 77284113 -89366183 + AT_rich Low_complexity Low_complexity 1 46 0 3 1174 422 376 65 19 chrX 77284329 77284589 -89365707 + LTR40a LTR ERVL 18 289 -230 3 1174 24 0 0 0 chrX 77284894 77284918 -89365378 + AT_rich Low_complexity Low_complexity 1 24 0 3 1174 24 32 0 0 chrX 77285685 77285716 -89364580 + AT_rich Low_complexity Low_complexity 1 31 0 3 1174 183 80 0 0 chrX 77285869 77285894 -89364402 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1174 367 288 51 0 chrX 77285923 77286041 -89364255 - Lx8 LINE L1 -124 7349 7226 3 1174 3762 181 32 11 chrX 77286049 77287383 -89362913 + L1_Mur1 LINE L1 679 1900 -3986 3 1174 421 286 41 49 chrX 77287383 77287576 -89362720 - RLTR46 LTR ERVK 0 357 126 3 1174 673 198 65 33 chrX 77287582 77287750 -89362546 - RLTR46 LTR ERVK -327 148 1 3 1174 998 206 53 4 chrX 77287750 77287994 -89362302 + Lx3C LINE L1 1895 2150 -3736 3 1174 5823 155 17 2 chrX 77287994 77289304 -89360992 + Lx3C LINE L1 4907 6248 -728 3 1174 541 67 13 0 chrX 77289308 77289383 -89360913 - ORR1A1 LTR MaLR -8 319 244 3 1174 376 91 0 0 chrX 77289380 77289435 -89360861 - ORR1A1 LTR MaLR -274 55 1 3 1174 9106 152 86 13 chrX 77289435 77291181 -89359115 - ORR1A1-int LTR MaLR 0 1963 91 3 1174 400 91 144 93 chrX 77291301 77291398 -89358898 - ORR1A1-int LTR MaLR -1407 102 1 3 1174 2190 134 6 6 chrX 77291398 77291742 -89358554 - ORR1A1 LTR MaLR -2 344 1 3 1174 2589 132 47 2 chrX 77291742 77292166 -89358130 + Lx3C LINE L1 6244 6686 -287 3 1174 24 32 0 0 chrX 77292299 77292330 -89357966 + AT_rich Low_complexity Low_complexity 1 31 0 3 1174 368 324 79 19 chrX 77292546 77292760 -89357536 - L1M2 LINE L1 -869 5274 5048 3 1174 216 111 0 0 chrX 77293044 77293080 -89357216 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1174 262 250 0 14 chrX 77293235 77293304 -89356992 - Lx7 LINE L1 -18 7678 7611 3 1174 444 37 0 0 chrX 77293370 77293424 -89356872 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 1174 25 0 0 0 chrX 77293557 77293582 -89356714 + AT_rich Low_complexity Low_complexity 1 25 0 3 1174 27 29 0 0 chrX 77293621 77293655 -89356641 + AT_rich Low_complexity Low_complexity 1 34 0 3 1174 24 67 0 0 chrX 77293693 77293738 -89356558 + AT_rich Low_complexity Low_complexity 1 45 0 3 1174 243 288 17 0 chrX 77293950 77294009 -89356287 - MER58A DNA MER1_type -152 72 13 3 1174 359 306 51 7 chrX 77294312 77294450 -89355846 + B1F SINE Alu 1 144 -5 3 1174 408 20 0 0 chrX 77294904 77294953 -89355343 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1174 369 350 42 8 chrX 77294958 77295076 -89355220 - RSINE1 SINE B4 -19 146 25 3 1174 7131 81 5 14 chrX 77295802 77296795 -89353501 - L1Md_F2 LINE L1 -648 5235 4252 3 1174 2723 63 0 3 chrX 77296796 77297145 -89353151 + L1Md_F2 LINE L1 5237 5584 -299 3 1174 7820 63 1 9 chrX 77297148 77298149 -89352147 + L1Md_F2 LINE L1 5588 6580 -2 3 1174 1540 270 60 60 chrX 77298178 77298640 -89351656 + MT2A LTR ERVL 14 450 -83 3 1174 405 0 0 0 chrX 77298640 77298685 -89351611 + (TAA)n Simple_repeat Simple_repeat 3 47 0 3 1174 1540 270 60 60 chrX 77298685 77298735 -89351561 + MT2A LTR ERVL 451 525 -8 3 1174 242 264 56 0 chrX 77299441 77299513 -89350783 - ID4 SINE ID -4 79 4 3 1174 6895 72 3 34 chrX 77299725 77300692 -89349604 - L1_Mus2 LINE L1 -1 6565 5629 3 1174 233 53 0 50 chrX 77301363 77301403 -89348893 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 3 1174 847 169 96 6 chrX 77301572 77301739 -89348557 + MTC LTR MaLR 1 182 -239 3 1174 24 0 0 0 chrX 77301739 77301763 -89348533 + AT_rich Low_complexity Low_complexity 1 24 0 3 1174 2479 129 21 0 chrX 77301865 77302245 -89348051 + Lx3_Mus LINE L1 6602 6989 -20 3 1174 396 0 0 0 chrX 77302245 77302289 -89348007 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 3 1174 234 0 0 0 chrX 77302545 77302571 -89347725 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1174 1921 186 125 5 chrX 77302876 77302960 -89347336 + RLTR33 LTR ERVK 189 272 -406 3 1174 713 225 287 61 chrX 77302960 77303420 -89346876 - RMER2 LTR ERV1 0 567 4 3 1174 1921 186 125 5 chrX 77303420 77303734 -89346562 + RLTR33 LTR ERVK 273 634 -44 3 1174 1237 218 4 4 chrX 77303971 77304197 -89346099 + MTC LTR MaLR 196 421 0 3 1174 611 147 39 0 chrX 77304656 77304758 -89345538 + URR1B DNA MER1_type 120 225 0 3 1174 570 15 0 0 chrX 77305291 77305358 -89344938 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 1174 426 344 9 4 chrX 77307128 77307356 -89342940 - L1MA4 LINE L1 -363 5937 5709 3 1174 1212 190 169 18 chrX 77307363 77307701 -89342595 - RLTR25A LTR ERVK 0 1103 715 3 1174 9715 98 7 3 chrX 77307724 77309860 -89340436 - L1_Mus1 LINE L1 0 6567 4421 3 1174 1163 172 3 158 chrX 77309861 77310163 -89340133 - RLTR25A LTR ERVK -441 662 408 3 1174 1466 178 50 21 chrX 77310163 77310445 -89339851 + RMER19A LTR ERVK 1 290 -447 4 1174 32834 93 12 1 chrX 77310856 77316953 -89333343 - L1Md_F2 LINE L1 -17 6565 380 4 1174 23166 148 15 25 chrX 77318352 77322298 -89327998 - L1_Mus3 LINE L1 -574 6064 2120 4 1174 1177 41 7 0 chrX 77322298 77322444 -89327852 + B1_Mus2 SINE Alu 1 147 0 4 1174 23166 157 16 29 chrX 77322444 77323030 -89327266 - L1_Mus3 LINE L1 -3764 2119 1584 4 1174 869 262 47 19 chrX 77323119 77323376 -89326920 - Lx9 LINE L1 -446 7198 6935 4 1174 994 290 52 40 chrX 77323408 77323835 -89326461 + Lx9 LINE L1 7212 7643 -1 4 1174 372 179 35 9 chrX 77324580 77324693 -89325603 + L1_Mur2 LINE L1 2301 2416 -3461 4 1174 345 47 0 0 chrX 77325184 77325227 -89325069 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 1174 5438 114 31 2 chrX 77325691 77327010 -89323286 + L1VL2 LINE L1 102 1464 -2151 4 1174 484 92 120 20 chrX 77327010 77327110 -89323186 + Lx LINE L1 6538 6647 -7 4 1174 182 125 0 30 chrX 77327472 77327505 -89322791 - L4 LINE RTE -990 1039 1008 4 1174 378 17 0 48 chrX 77329774 77329836 -89320460 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 4 1174 626 236 137 44 chrX 77331063 77331267 -89319029 - Lx5 LINE L1 0 7050 6828 4 1174 1390 207 72 50 chrX 77331245 77331565 -89318731 + Lx5 LINE L1 6583 6909 -141 4 1174 24 0 0 0 chrX 77332169 77332193 -89318103 + AT_rich Low_complexity Low_complexity 1 24 0 4 1175 360 230 7 215 chrX 77332775 77332919 -89317377 + PB1D7 SINE Alu 1 114 -6 4 1175 24 32 0 0 chrX 77333045 77333076 -89317220 + AT_rich Low_complexity Low_complexity 1 31 0 4 1175 37509 46 0 2 chrX 77333083 77339247 -89311049 - L1Md_T LINE L1 0 6585 338 4 1175 582 312 50 37 chrX 77339823 77339880 -89310416 - L1M1 LINE L1 -482 5821 5768 4 1175 4689 83 0 2 chrX 77339880 77340508 -89309788 - L1Md_F2 LINE L1 -13 6569 5943 4 1175 582 312 50 37 chrX 77340508 77340789 -89309507 - L1M1 LINE L1 -536 5767 5478 4 1175 333 62 0 0 chrX 77340789 77340837 -89309459 + (GTTTG)n Simple_repeat Simple_repeat 2 49 0 4 1175 582 312 50 37 chrX 77340837 77340962 -89309334 - L1M1 LINE L1 -826 5477 5354 4 1175 320 197 28 0 chrX 77341083 77341154 -89309142 + HAL1-3A_ME LINE L1 1956 2028 -830 4 1175 318 366 32 32 chrX 77341169 77341327 -89308969 + MTE-int LTR MaLR 919 1076 -504 4 1175 720 272 75 108 chrX 77341325 77341671 -89308625 + MTE-int LTR MaLR 1194 1527 -53 4 1175 341 361 70 34 chrX 77341671 77342007 -89308289 + MTEa LTR MaLR 1 376 -3 4 1175 253 153 128 63 chrX 77342116 77342239 -89308057 - L1MB4 LINE L1 -17 6166 6023 4 1175 330 302 37 25 chrX 77342264 77342427 -89307869 - L1MB4 LINE L1 -220 5960 5796 4 1175 495 48 0 0 chrX 77342427 77342489 -89307807 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 1175 372 274 121 4 chrX 77342489 77342720 -89307576 + Tigger2b DNA MER2_type 6 263 -463 4 1175 327 49 0 0 chrX 77342743 77342784 -89307512 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 1175 367 330 76 35 chrX 77342906 77343220 -89307076 + Tigger2b DNA MER2_type 325 651 -75 4 1175 238 262 50 0 chrX 77343328 77343408 -89306888 - L1MB4 LINE L1 -444 5736 5653 4 1175 24291 44 1 1 chrX 77343402 77347104 -89303192 - L1Md_F2 LINE L1 0 6582 2881 4 1175 8727 13 0 1 chrX 77347094 77348254 -89302042 - L1Md_A LINE L1 0 6582 5424 4 1175 13205 19 2 1 chrX 77348252 77349806 -89300490 + L1Md_A LINE L1 3895 5450 -433 4 1175 13764 43 0 15 chrX 77349800 77352305 -89297991 - L1Md_F2 LINE L1 -2981 2902 441 4 1175 4452 181 37 2 chrX 77352307 77353182 -89297114 - RMER6-int LTR ERVK -2053 1124 220 4 1175 5203 203 18 1 chrX 77353183 77354738 -89295558 + Lx4B LINE L1 5189 6782 -276 4 1175 33 56 0 0 chrX 77354904 77354958 -89295338 + AT_rich Low_complexity Low_complexity 1 54 0 4 1175 27 29 0 0 chrX 77355158 77355192 -89295104 + AT_rich Low_complexity Low_complexity 1 34 0 4 1175 989 80 58 7 chrX 77355201 77355340 -89294956 + B1_Mus1 SINE Alu 2 147 -1 4 1175 3252 152 68 0 chrX 77355401 77355949 -89294347 - Lx4A LINE L1 -1 7057 6473 4 1175 10396 137 52 40 chrX 77355952 77356957 -89293339 - Lx4A LINE L1 -780 6278 5243 4 1175 225 0 0 0 chrX 77356957 77356982 -89293314 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 4 1175 10396 161 63 94 chrX 77356982 77357419 -89292877 - Lx4A LINE L1 -635 5242 4782 4 1175 1501 31 26 5 chrX 77357419 77357613 -89292683 - ORR1A0 LTR MaLR 0 346 149 4 1175 10396 161 63 94 chrX 77357613 77358944 -89291352 - Lx4A LINE L1 -635 4781 3373 4 1175 670 56 0 43 chrX 77358941 77359035 -89291261 - L1_Mus4 LINE L1 -353 6283 6194 4 1175 8169 193 24 17 chrX 77359610 77360087 -89290209 + Lx2 LINE L1 4137 4639 -1247 4 1175 294 36 35 35 chrX 77360087 77360144 -89290152 + (CAAA)n Simple_repeat Simple_repeat 2 58 0 4 1175 8169 165 27 15 chrX 77360144 77362486 -89287810 + Lx2 LINE L1 4640 6987 -10 4 1175 672 48 0 0 chrX 77362489 77362573 -89287723 + (GAAAA)n Simple_repeat Simple_repeat 2 85 0 4 1175 611 331 50 24 chrX 77363370 77363667 -89286629 - Lx8 LINE L1 0 7473 7169 4 1175 2274 99 9 6 chrX 77364324 77364659 -89285637 - Lx LINE L1 -8 6646 6311 4 1175 517 221 81 8 chrX 77366196 77366319 -89283977 + MT2A LTR ERVL 1 132 -401 4 1175 192 77 0 0 chrX 77366352 77366378 -89283918 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 4 1175 2347 251 22 11 chrX 77366378 77366926 -89283370 - Lx5 LINE L1 -19 7031 6478 4 1175 2231 194 24 4 chrX 77366930 77367386 -89282910 - L1_Mur2 LINE L1 -13 5864 5400 4 1175 1259 173 50 126 chrX 77367386 77367750 -89282546 + RMER3D-int LTR ERVK 1355 1690 -1152 4 1175 3112 213 37 53 chrX 77367755 77368683 -89281613 + RMER3D-int LTR ERVK 1925 2837 -5 4 1175 2823 92 19 10 chrX 77368689 77369106 -89281190 + BGLII LTR ERVK 1 421 0 4 1175 2485 208 95 63 chrX 77369241 77370123 -89280173 - RLTR13D6 LTR ERVK -46 856 1 4 1175 267 280 131 39 chrX 77370125 77370255 -89280041 + B3 SINE B2 65 206 -10 4 1175 468 0 0 0 chrX 77370550 77370602 -89279694 + (GAA)n Simple_repeat Simple_repeat 3 54 0 4 1175 1368 229 113 31 chrX 77371541 77372031 -89278265 - RMER4B LTR ERVK 0 585 17 4 1175 3127 240 48 110 chrX 77372035 77372573 -89277723 + Lx5 LINE L1 6057 6547 -503 4 1175 572 122 0 9 chrX 77372573 77372689 -89277607 + L1_Mus4 LINE L1 6515 6629 -7 4 1175 3127 240 48 110 chrX 77372689 77373207 -89277089 + Lx5 LINE L1 6548 7048 -2 4 1175 396 0 0 0 chrX 77373531 77373575 -89276721 + (TAA)n Simple_repeat Simple_repeat 2 45 0 4 1175 2032 336 68 63 chrX 77373835 77374278 -89276018 - Lx8 LINE L1 -293 7180 6757 4 1175 1287 152 293 30 chrX 77374278 77374643 -89275653 - RMER6B LTR ERVK 0 461 1 4 1175 2032 336 68 63 chrX 77374643 77375408 -89274888 - Lx8 LINE L1 -717 6756 5959 4 1175 207 0 0 0 chrX 77375408 77375431 -89274865 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1175 2032 336 68 63 chrX 77375431 77375452 -89274844 - Lx8 LINE L1 -1515 5958 5938 4 1175 594 75 28 18 chrX 77375452 77375561 -89274735 - L1Md_F2 LINE L1 0 6582 6473 4 1175 2032 336 68 63 chrX 77375561 77375700 -89274596 - Lx8 LINE L1 -1536 5937 5805 4 1175 3286 43 5 0 chrX 77375700 77376094 -89274202 + MTA_Mm LTR MaLR 1 396 0 4 1175 304 264 39 94 chrX 77376094 77376128 -89274168 - Lx9 LINE L1 -1834 5810 5785 4 1175 2057 190 41 70 chrX 77376128 77376642 -89273654 - RLTR19 LTR ERVK 0 499 1 4 1175 296 282 0 0 chrX 77376673 77376744 -89273552 - MTD LTR MaLR -331 88 18 4 1175 353 253 20 11 chrX 77376749 77376873 -89273423 - MTD-int LTR MaLR -2 1256 1147 4 1175 1035 109 0 7 chrX 77376935 77377083 -89273213 - B1_Mus1 SINE Alu -1 147 1 4 1175 6837 179 56 40 chrX 77377083 77377944 -89272352 - Lx4B LINE L1 -31 7027 6161 4 1175 2765 76 41 15 chrX 77377944 77378334 -89271962 + MTB LTR MaLR 1 400 0 4 1175 6837 161 30 12 chrX 77378334 77379558 -89270738 - Lx4B LINE L1 -898 6160 4898 4 1175 1388 258 121 89 chrX 77379562 77380167 -89270129 - MTD-int LTR MaLR -123 1135 512 4 1175 1717 268 5 10 chrX 77380152 77380544 -89269752 + MTD LTR MaLR 28 417 -2 4 1175 716 256 81 62 chrX 77380604 77381010 -89269286 - MTD-int LTR MaLR -755 503 1 4 1175 1285 256 163 3 chrX 77381010 77381371 -89268925 - MTD LTR MaLR 0 419 1 4 1175 869 280 34 23 chrX 77381371 77381725 -89268571 - L1M2 LINE L1 -487 5813 5456 4 1175 3801 112 3 3 chrX 77382942 77383513 -89266783 - L1_Mm LINE L1 -316 5567 4997 4 1175 667 167 16 171 chrX 77383494 77383740 -89266556 - L1_Mur2 LINE L1 -5942 770 563 4 1175 279 0 0 0 chrX 77383740 77383771 -89266525 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 4 1175 811 97 0 0 chrX 77383794 77383907 -89266389 - B1_Mus2 SINE Alu 0 147 35 4 1175 313 243 43 43 chrX 77383821 77383937 -89266359 - MT2B LTR ERVL -323 278 163 4 1175 810 256 40 88 chrX 77383938 77384315 -89265981 - L1_Mur2 LINE L1 -6181 531 173 4 1175 252 0 0 0 chrX 77384326 77384354 -89265942 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1175 5634 158 22 28 chrX 77384567 77385679 -89264617 + L1Md_T LINE L1 101 1205 -5411 4 1175 29505 27 0 0 chrX 77385685 77390102 -89260194 + L1Md_T LINE L1 1170 5586 -297 4 1175 8028 54 0 0 chrX 77390102 77391098 -89259198 + L1Md_T LINE L1 5587 6582 0 4 1175 1296 288 13 38 chrX 77391111 77391483 -89258813 + MTD LTR MaLR 41 403 -16 4 1175 494 321 50 18 chrX 77391507 77391729 -89258567 + MTE-int LTR MaLR 254 482 -1098 4 1175 387 272 55 40 chrX 77391740 77391939 -89258357 + MTE-int LTR MaLR 1360 1561 -19 4 1175 480 237 56 9 chrX 77391952 77392059 -89258237 + Lx6 LINE L1 7034 7132 -328 4 1175 249 57 0 0 chrX 77392069 77392104 -89258192 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1175 1848 232 98 50 chrX 77392104 77392625 -89257671 - Lx6 LINE L1 -340 7120 6575 4 1175 3660 230 25 67 chrX 77392620 77393612 -89256684 + Lx6 LINE L1 5618 6568 -892 4 1175 276 298 42 11 chrX 77393806 77393901 -89256395 - Lx4B LINE L1 -17 7041 6944 4 1175 26 64 0 0 chrX 77393901 77393948 -89256348 + AT_rich Low_complexity Low_complexity 1 47 0 4 1175 23 0 0 0 chrX 77394034 77394057 -89256239 + AT_rich Low_complexity Low_complexity 1 23 0 4 1175 261 0 0 0 chrX 77394308 77394337 -89255959 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1175 396 0 0 0 chrX 77395173 77395217 -89255079 + (TA)n Simple_repeat Simple_repeat 1 44 0 4 1175 285 216 0 0 chrX 77395219 77395270 -89255026 - Lx6 LINE L1 -386 7074 7024 4 1175 465 268 81 8 chrX 77396138 77396262 -89254034 + RSINE1 SINE B4 8 140 -25 4 1175 3559 194 41 1 chrX 77396800 77397487 -89252809 + Lx4A LINE L1 6343 7056 -2 4 1175 240 163 0 0 chrX 77397589 77397632 -89252664 + T-rich Low_complexity Low_complexity 1 43 0 4 1175 6514 50 0 5 chrX 77397651 77398468 -89251828 - L1Md_F2 LINE L1 0 6582 5770 4 1175 222 91 0 0 chrX 77398483 77398516 -89251780 + (TC)n Simple_repeat Simple_repeat 2 34 0 4 1175 8924 123 70 75 chrX 77398516 77400254 -89250042 - RLTR22_Mur LTR ERVK -6 1842 114 4 1175 3281 192 72 63 chrX 77400460 77401294 -89249002 - RLTR25B LTR ERVK -166 862 22 4 1175 339 132 0 0 chrX 77401294 77401362 -89248934 + (TC)n Simple_repeat Simple_repeat 1 68 0 4 1175 814 141 6 6 chrX 77401359 77401516 -89248780 + CT-rich Low_complexity Low_complexity 1 157 0 4 1175 221 309 83 53 chrX 77401548 77401681 -89248615 + MIRb SINE MIR 118 254 -14 4 1175 38 61 0 0 chrX 77401814 77401880 -89248416 + AT_rich Low_complexity Low_complexity 1 66 0 4 1175 527 237 93 29 chrX 77402358 77402497 -89247799 - B1_Mur2 SINE Alu -1 148 1 4 1175 21 0 0 0 chrX 77402609 77402630 -89247666 + AT_rich Low_complexity Low_complexity 1 21 0 4 1175 21 71 0 0 chrX 77403223 77403265 -89247031 + AT_rich Low_complexity Low_complexity 1 42 0 5 1175 403 350 88 6 chrX 77403586 77403928 -89246368 - L1MA4 LINE L1 -398 5902 5533 5 1175 255 140 0 0 chrX 77404017 77404067 -89246229 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1175 554 282 109 38 chrX 77404080 77404403 -89245893 + Lx8 LINE L1 5548 5926 -1547 5 1175 7606 36 3 2 chrX 77404466 77405383 -89244913 - L1Md_F3 LINE L1 -3 6581 5664 5 1175 811 307 0 0 chrX 77405574 77405789 -89244507 + B3 SINE B2 2 216 0 5 1175 546 270 151 28 chrX 77405899 77406621 -89243675 - L1MA4 LINE L1 -463 5384 4636 5 1175 6477 157 49 63 chrX 77406722 77407446 -89242850 - Lx4A LINE L1 -6 7052 6295 5 1175 369 328 0 84 chrX 77407446 77407589 -89242707 - RLTR26 LTR ERVK -4 638 508 5 1175 6477 157 49 63 chrX 77407589 77409045 -89241251 - Lx4A LINE L1 -6 6294 4767 5 1175 333 415 92 40 chrX 77409148 77409572 -89240724 + LTR33 LTR ERVL 56 501 -14 5 1175 21 36 0 0 chrX 77409586 77409614 -89240682 + AT_rich Low_complexity Low_complexity 1 28 0 5 1175 237 402 16 33 chrX 77410251 77410372 -89239924 + PB1 SINE Alu 2 120 -7 5 1175 31 44 0 0 chrX 77410619 77410664 -89239632 + AT_rich Low_complexity Low_complexity 1 45 0 5 1175 336 83 0 0 chrX 77412095 77412143 -89238153 + (TTTTC)n Simple_repeat Simple_repeat 3 50 0 5 1175 401 156 13 0 chrX 77412145 77412222 -89238074 + C-rich Low_complexity Low_complexity 1 78 0 5 1175 471 35 0 0 chrX 77412222 77412279 -89238017 + (TTTC)n Simple_repeat Simple_repeat 1 57 0 5 1175 1007 138 6 0 chrX 77415239 77415406 -89234890 + URR1A DNA MER1_type 58 225 -1 5 1175 21 57 0 0 chrX 77416458 77416493 -89233803 + AT_rich Low_complexity Low_complexity 1 35 0 5 1175 22 0 0 0 chrX 77416759 77416781 -89233515 + AT_rich Low_complexity Low_complexity 1 22 0 5 1175 1735 238 42 95 chrX 77417014 77417538 -89232758 + RMER19C LTR ERVK 1 496 -115 5 1175 691 83 0 16 chrX 77417866 77417989 -89232307 + (TTTTG)n Simple_repeat Simple_repeat 2 122 0 5 1175 413 322 77 13 chrX 77418253 77418564 -89231732 - L1M2 LINE L1 -1382 4761 4431 5 1175 370 293 33 117 chrX 77418569 77418902 -89231394 - RMER10A LTR ERVL -16 426 122 5 1175 309 318 56 59 chrX 77419029 77419353 -89230943 - L1M2 LINE L1 -1832 4308 3986 5 1175 2489 271 100 76 chrX 77419486 77420821 -89229475 - ORR1D2-int LTR MaLR -53 1527 3 5 1175 1326 251 44 52 chrX 77420827 77421192 -89229104 - ORR1D2 LTR MaLR -8 362 1 5 1175 1096 73 0 0 chrX 77421774 77421910 -89228386 + B1_Mus1 SINE Alu 4 139 -9 5 1175 230 0 33 0 chrX 77421910 77421940 -89228356 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1175 555 78 0 0 chrX 77423144 77423221 -89227075 + (TC)n Simple_repeat Simple_repeat 1 77 0 5 1175 504 48 0 0 chrX 77423222 77423285 -89227011 + (TTCC)n Simple_repeat Simple_repeat 2 64 0 5 1175 403 313 144 89 chrX 77423346 77423616 -89226680 - B4A SINE B4 -6 286 2 5 1175 829 321 55 30 chrX 77424131 77424459 -89225837 + ORR1D2 LTR MaLR 35 370 0 5 1175 21 0 0 0 chrX 77425047 77425068 -89225228 + AT_rich Low_complexity Low_complexity 1 21 0 5 1175 689 282 137 67 chrX 77425123 77425465 -89224831 - RLTR9A LTR ERVK 0 368 3 5 1175 25 0 0 0 chrX 77425675 77425700 -89224596 + AT_rich Low_complexity Low_complexity 1 25 0 5 1175 505 293 60 60 chrX 77425757 77426022 -89224274 + L1_Mur3 LINE L1 5028 5292 -588 5 1175 554 338 44 33 chrX 77426029 77426301 -89223995 + Lx8 LINE L1 7188 7462 -11 5 1175 256 296 62 23 chrX 77426304 77426480 -89223816 + L1_Rod LINE L1 5247 5429 -451 5 1175 245 337 21 0 chrX 77426630 77426725 -89223571 + MER5B DNA MER1_type 43 139 -39 5 1175 8248 33 0 0 chrX 77427585 77428559 -89221737 + L1Md_T LINE L1 5609 6582 0 5 1175 4430 58 0 0 chrX 77428746 77429298 -89220998 + L1Md_F2 LINE L1 5034 5585 -298 5 1175 8000 43 11 7 chrX 77429299 77430289 -89220007 + L1Md_F2 LINE L1 5587 6580 -2 5 1175 295 440 11 0 chrX 77430664 77430839 -89219457 - MER5A DNA MER1_type 0 189 13 5 1175 475 182 117 16 chrX 77432673 77432801 -89217495 + URR1B DNA MER1_type 80 220 -5 5 1175 255 295 38 13 chrX 77432855 77432934 -89217362 + Lx7 LINE L1 7194 7274 -422 5 1175 332 122 0 20 chrX 77432942 77432982 -89217314 + L1_Mm LINE L1 5548 5587 -296 5 1175 7723 61 1 8 chrX 77432982 77433984 -89216312 + L1Md_F2 LINE L1 5588 6582 0 5 1175 207 0 0 0 chrX 77434006 77434029 -89216267 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1175 1151 58 0 0 chrX 77434044 77434182 -89216114 - B1_Mus1 SINE Alu -9 139 2 5 1175 655 296 38 23 chrX 77434200 77434463 -89215833 - MTD LTR MaLR -151 268 2 5 1175 477 314 24 36 chrX 77434680 77434845 -89215451 + B3A SINE B2 36 198 0 5 1175 1100 73 0 0 chrX 77435231 77435368 -89214928 - B1_Mus2 SINE Alu -10 137 1 5 1175 658 63 9 26 chrX 77435752 77435866 -89214430 + L1Md_F2 LINE L1 6471 6582 0 5 1175 282 313 50 10 chrX 77436005 77436105 -89214191 - Lx7 LINE L1 -493 7203 7100 5 1175 957 224 38 8 chrX 77436101 77436340 -89213956 - Lx7 LINE L1 -1379 6317 6072 5 1175 6038 213 78 137 chrX 77436334 77438989 -89211307 - L1_Mur3 LINE L1 -1469 4411 1912 5 1175 2590 188 63 16 chrX 77440275 77440553 -89209743 - L1_Mur3 LINE L1 -3965 1915 1610 5 1175 201 39 0 0 chrX 77440553 77440579 -89209717 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 1175 2590 188 63 16 chrX 77440579 77440838 -89209458 - L1_Mur3 LINE L1 -4271 1609 1343 5 1175 1306 86 11 16 chrX 77440838 77441027 -89209269 - B2_Mm2 SINE B2 -6 189 2 5 1175 2776 246 38 19 chrX 77441027 77441782 -89208514 - L1_Mur3 LINE L1 -6384 1344 582 5 1175 23 33 0 0 chrX 77442787 77442817 -89207479 + AT_rich Low_complexity Low_complexity 1 30 0 5 1175 5369 152 22 0 chrX 77442936 77443986 -89206310 + L1VL2 LINE L1 56 1130 -2485 5 1175 488 276 47 0 chrX 77444352 77444479 -89205817 - ETnERV2-int LTR ERVK -204 7202 7070 5 1175 9302 124 4 14 chrX 77444480 77445871 -89204425 + MusHAL1 LINE L1 222 1597 -1115 5 1175 222 37 0 0 chrX 77445871 77445898 -89204398 + (CAA)n Simple_repeat Simple_repeat 1 27 0 5 1175 9302 124 4 14 chrX 77445898 77446131 -89204165 + MusHAL1 LINE L1 1598 1829 -883 5 1175 9087 134 29 3 chrX 77446125 77447752 -89202544 - MusHAL1 LINE L1 -689 2023 355 5 1175 6914 124 7 50 chrX 77447759 77449851 -89200445 - L1_Mus2 LINE L1 0 6566 4588 5 1175 8713 126 8 9 chrX 77449840 77450583 -89199713 - L1_Mus2 LINE L1 -3154 2729 1992 5 1175 2599 109 144 25 chrX 77450583 77451014 -89199282 - RLTR45 LTR ERVK 0 482 1 5 1175 8713 146 5 16 chrX 77451014 77452343 -89197953 - L1_Mus2 LINE L1 -3892 1991 668 5 1175 574 222 20 14 chrX 77452411 77452557 -89197739 - L1Md_F LINE L1 -5795 724 578 5 1175 576 222 47 112 chrX 77452588 77452821 -89197475 - L1VL2 LINE L1 -5998 424 162 5 1175 529 184 51 7 chrX 77452970 77453107 -89197189 - Lx9 LINE L1 -192 7452 7310 5 1175 216 67 0 0 chrX 77453121 77453151 -89197145 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1175 847 266 59 21 chrX 77453151 77453439 -89196857 - Lx9 LINE L1 -329 7315 7017 5 1175 34836 61 1 24 chrX 77453450 77459318 -89190978 + L1Md_T LINE L1 99 5586 -297 5 1175 7960 60 0 0 chrX 77459318 77460364 -89189932 + L1Md_T LINE L1 5587 6582 0 5 1175 1249 232 30 8 chrX 77460448 77460713 -89189583 + RLTR12B LTR ERVK 3 273 -255 5 1175 352 244 24 0 chrX 77460713 77460840 -89189456 + Lx4B LINE L1 3891 4020 -1866 5 1175 974 133 26 5 chrX 77460841 77461030 -89189266 + Lx4B LINE L1 4554 4746 -1131 5 1175 1753 246 127 117 chrX 77461030 77461140 -89189156 - RLTR13D6 LTR ERVK -149 874 798 5 1175 1157 56 7 0 chrX 77461140 77461283 -89189013 - B1_Mus1 SINE Alu 0 148 5 5 1175 4545 102 9 68 chrX 77461283 77462037 -89188259 - RLTR13D6 LTR ERVK -226 797 1 5 1175 3196 228 29 4 chrX 77462037 77462764 -89187532 + Lx2B LINE L1 6256 7000 0 5 146 5567 218 36 35 chrX 77462758 77464332 -89185964 + Lx4B LINE L1 5350 6939 -119 5 1176 318 67 0 0 chrX 77465283 77465328 -89184968 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 5 1176 984 118 0 0 chrX 77465328 77465464 -89184832 - B1_Mus1 SINE Alu -12 136 1 5 1176 461 191 0 38 chrX 77466953 77467084 -89183212 - Lx2B LINE L1 -3 6997 6872 5 1176 7622 168 7 35 chrX 77467086 77468731 -89181565 - L1_Mur1 LINE L1 -2142 3744 2147 5 1176 1498 141 0 39 chrX 77468744 77469002 -89181294 + RLTR22_Mur LTR ERVK 1 248 -1600 5 1176 1333 99 48 72 chrX 77468997 77469132 -89181164 + RLTR22_Mur LTR ERVK 589 728 -1120 5 1176 180 0 0 0 chrX 77469132 77469152 -89181144 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 1176 594 28 0 0 chrX 77469152 77469223 -89181073 + (GA)n Simple_repeat Simple_repeat 1 72 0 5 1176 1333 99 48 72 chrX 77469223 77469336 -89180960 + RLTR22_Mur LTR ERVK 729 831 -1017 5 1176 264 344 44 31 chrX 77469541 77469700 -89180596 + RMER12 LTR ERVK 1101 1261 -61 5 1176 355 297 23 42 chrX 77470361 77470621 -89179675 + RNERVK23-int LTR ERVK 184 438 -6806 5 1176 309 320 23 17 chrX 77471881 77472053 -89178243 + RNERVK23-int LTR ERVK 1654 1826 -6391 5 1176 1993 313 51 35 chrX 77472348 77474205 -89176091 + RNERVK23-int LTR ERVK 1722 3715 -4502 5 1176 411 107 0 0 chrX 77474323 77474398 -89175898 + (T)n Simple_repeat Simple_repeat 1 75 0 5 1176 299 326 51 51 chrX 77474433 77474997 -89175299 + RNERVK23-int LTR ERVK 3763 4743 -3474 5 1176 458 294 15 15 chrX 77475192 77475389 -89174907 + RNERVK23-int LTR ERVK 4932 5128 -3089 5 1176 2108 86 7 10 chrX 77476327 77476621 -89173675 - L1_Mus1 LINE L1 0 6567 6275 5 1176 3279 88 15 0 chrX 77476621 77477087 -89173209 + L1Md_F2 LINE L1 5731 6203 -379 5 1176 4558 165 9 9 chrX 77477472 77478290 -89172006 + Lx2 LINE L1 6129 6946 -51 5 1176 1971 123 10 3 chrX 77478291 77478600 -89171696 + L1_Mus3 LINE L1 6326 6636 -2 5 1176 22 80 0 0 chrX 77478611 77478661 -89171635 + AT_rich Low_complexity Low_complexity 1 50 0 5 1176 3667 106 47 0 chrX 77479072 77479600 -89170696 - L1_Mus1 LINE L1 0 6567 6015 5 1176 17256 94 3 5 chrX 77479600 77482198 -89168098 - L1_Mm LINE L1 -885 4998 2406 5 1176 885 184 6 49 chrX 77482377 77482413 -89167883 - B2_Mm1t SINE B2 -18 175 148 5 1176 585 0 0 0 chrX 77482413 77482478 -89167818 + (TA)n Simple_repeat Simple_repeat 1 65 0 5 1176 1002 123 0 0 chrX 77482478 77482624 -89167672 - B2_Mm2 SINE B2 -49 146 1 5 1176 1049 116 7 0 chrX 77484169 77484315 -89165981 + B1_Mus2 SINE Alu 1 147 0 5 1176 289 45 58 29 chrX 77484315 77484384 -89165912 + (CAAAA)n Simple_repeat Simple_repeat 4 74 0 5 1176 22 70 0 0 chrX 77485234 77485277 -89165019 + AT_rich Low_complexity Low_complexity 1 43 0 5 1176 566 300 107 14 chrX 77485783 77486064 -89164232 + L1M4 LINE L1 4396 4702 -1444 5 1176 785 139 23 6 chrX 77486098 77486271 -89164025 + GA-rich Low_complexity Low_complexity 4 179 0 5 1176 736 102 20 93 chrX 77486645 77486796 -89163500 + RLTR31A_Mm LTR ERVK 1 140 -444 5 1176 1699 222 164 36 chrX 77486819 77487399 -89162897 - RMER6C LTR ERVK -36 654 1 5 1176 1747 174 134 40 chrX 77487401 77487850 -89162446 - RMER6-int LTR ERVK -3 3174 2684 5 1176 539 309 0 7 chrX 77487851 77487991 -89162305 - ORR1D1 LTR MaLR -66 318 180 5 1176 3327 198 27 14 chrX 77487999 77488638 -89161658 - RLTR17 LTR ERVK 0 692 46 5 1176 558 231 58 83 chrX 77488660 77488803 -89161493 - ORR1D1 LTR MaLR -210 164 23 5 1176 216 19 0 102 chrX 77488803 77488862 -89161434 + (CAGC)n Simple_repeat Simple_repeat 2 54 0 6 1176 558 231 58 83 chrX 77488862 77488874 -89161422 - ORR1D1 LTR MaLR -352 22 13 5 1176 5951 122 55 7 chrX 77488874 77489874 -89160422 - Lx LINE L1 -9 6645 5598 6 1176 962 121 0 1 chrX 77489876 77490054 -89160242 + L1_Mur2 LINE L1 3329 3504 -2373 6 1176 571 229 49 0 chrX 77490054 77490176 -89160120 + ETnERV2-int LTR ERVK 7075 7202 -204 6 1176 6962 222 40 78 chrX 77490561 77491710 -89158586 + L1_Mus3 LINE L1 3494 4643 -1240 6 1176 267 31 0 0 chrX 77491710 77491742 -89158554 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 6 1176 1016 111 0 0 chrX 77491744 77491879 -89158417 - B1_Mm SINE Alu -12 135 1 6 1176 6962 222 40 78 chrX 77491879 77491940 -89158356 + L1_Mus3 LINE L1 4644 4674 -1209 6 1176 776 55 9 0 chrX 77491940 77492050 -89158246 + (TCTA)n Simple_repeat Simple_repeat 4 114 0 6 1176 6962 160 28 38 chrX 77492050 77494056 -89156240 + L1_Mus3 LINE L1 4675 6637 -1 6 1176 3214 156 53 7 chrX 77494198 77494817 -89155479 + L1Md_F2 LINE L1 164 811 -5805 6 1176 8417 96 9 2 chrX 77494836 77496096 -89154200 + L1Md_F2 LINE L1 4318 5586 -297 6 1176 7126 94 3 4 chrX 77496097 77497093 -89153203 + L1Md_F2 LINE L1 5588 6582 0 6 1176 287 352 24 16 chrX 77497199 77497323 -89152973 + B1F SINE Alu 22 146 -3 6 1176 210 385 0 0 chrX 77497361 77497426 -89152870 + ID4_ SINE ID 17 81 -2 6 1176 362 274 175 41 chrX 77497457 77497651 -89152645 + L1M4 LINE L1 5301 5520 -658 6 1176 12135 57 2 2 chrX 77497675 77500000 -89150296 - L1Md_F3 LINE L1 0 6584 4262 6 1176 23182 77 8 3 chrX 77500000 77503875 -89146421 - L1Md_A LINE L1 -1622 4261 411 1 1176 209 111 0 62 chrX 77504536 77504584 -89145712 + (TTTG)n Simple_repeat Simple_repeat 3 47 0 2 1176 630 289 64 20 chrX 77505603 77505960 -89144336 - L1MCa LINE L1 -3086 3478 3106 3 1176 1738 162 48 0 chrX 77506042 77506356 -89143940 + ORR1A4 LTR MaLR 1 329 0 4 1176 2539 149 25 2 chrX 77506356 77506787 -89143509 + ORR1A4-int LTR MaLR 1 441 -1522 4 1176 986 283 97 38 chrX 77506823 77507717 -89142579 + Lx9 LINE L1 5663 6709 -935 5 1176 823 206 22 101 chrX 77507731 77507958 -89142338 + URR1A DNA MER1_type 3 211 -15 6 1176 2690 232 92 39 chrX 77507975 77508820 -89141476 + Lx9 LINE L1 6745 7634 -10 5 1176 559 290 99 18 chrX 77508915 77509416 -89140880 - L1MCa LINE L1 -5374 1377 754 3 1176 2659 93 5 30 chrX 77509460 77509860 -89140436 - L1_Mm LINE L1 -808 5075 4686 7 1176 6520 51 0 5 chrX 77509860 77510662 -89139634 + L1Md_F2 LINE L1 5770 6567 -15 8 1176 1983 176 19 40 chrX 77510672 77511093 -89139203 - L1_Mur2 LINE L1 -6003 709 298 9 1176 242 316 0 0 chrX 77511913 77511989 -89138307 + MLT1F LTR MaLR 3 78 -482 1 1176 311 346 132 51 chrX 77512066 77512354 -89137942 + MLT1F LTR MaLR 206 548 -21 1 1176 269 291 19 0 chrX 77513095 77513198 -89137098 + L1M2 LINE L1 4447 4551 -1592 1 1176 507 33 0 0 chrX 77513529 77513590 -89136706 + (GA)n Simple_repeat Simple_repeat 1 61 0 1 1176 24 0 0 0 chrX 77513709 77513733 -89136563 + AT_rich Low_complexity Low_complexity 1 24 0 1 1176 26 0 0 0 chrX 77513814 77513840 -89136456 + AT_rich Low_complexity Low_complexity 1 26 0 1 1176 319 162 12 0 chrX 77513840 77513920 -89136376 - L1Md_F2 LINE L1 0 6582 6502 1 1176 1060 50 72 0 chrX 77513930 77514069 -89136227 + L1_Mus2 LINE L1 6108 6256 -310 1 1176 303 294 67 0 chrX 77514241 77514360 -89135936 + L1MB5 LINE L1 5114 5240 -906 1 1176 212 0 0 35 chrX 77514406 77514435 -89135861 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 1 1176 441 277 46 29 chrX 77514443 77514681 -89135615 + L1MB5 LINE L1 5318 5559 -615 1 1176 267 103 0 0 chrX 77514909 77514948 -89135348 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1176 893 348 36 36 chrX 77514970 77515527 -89134769 - Lx9 LINE L1 -208 7436 6880 2 1176 760 254 42 75 chrX 77515646 77515859 -89134437 - MTD LTR MaLR -68 351 146 2 1176 1843 181 11 23 chrX 77515861 77516211 -89134085 - ORR1B1 LTR MaLR -8 386 41 2 1176 3041 163 30 143 chrX 77516218 77516978 -89133318 - ORR1B1-int LTR MaLR 0 1963 1290 2 1176 1833 153 56 47 chrX 77516979 77517029 -89133267 + ORR1A1 LTR MaLR 2 51 -295 2 1176 3767 145 7 5 chrX 77517029 77517624 -89132672 + Lx2A1 LINE L1 6412 7007 -1 2 1176 1833 153 56 47 chrX 77517624 77517915 -89132381 + ORR1A1 LTR MaLR 52 346 0 2 1176 2413 221 85 53 chrX 77517915 77518555 -89131741 - ORR1A3-int LTR MaLR -664 1299 635 2 1176 1256 165 33 80 chrX 77518349 77518625 -89131671 - MT2B LTR ERVL -338 263 1 2 1176 746 196 12 44 chrX 77518625 77518781 -89131515 - MTD LTR MaLR -266 153 3 2 1176 34 65 0 0 chrX 77518876 77518938 -89131358 + AT_rich Low_complexity Low_complexity 1 62 0 2 1176 244 363 89 5 chrX 77518979 77519170 -89131126 + L1MB5 LINE L1 5889 6095 -79 1 1176 1502 201 3 7 chrX 77520136 77520446 -89129850 - L1_Mm LINE L1 -1021 4862 4554 2 1176 6153 150 65 3 chrX 77520444 77521861 -89128435 + Lx LINE L1 5164 6647 -7 2 1176 788 80 9 0 chrX 77521918 77522031 -89128265 + (GGAA)n Simple_repeat Simple_repeat 3 116 0 3 1176 646 336 54 10 chrX 77522042 77522340 -89127956 + Lx8 LINE L1 7003 7313 -160 3 1176 1325 274 66 0 chrX 77522362 77522771 -89127525 - Lx7 LINE L1 -1329 6367 5932 3 1176 2545 87 8 8 chrX 77522773 77523131 -89127165 + MTB LTR MaLR 1 358 -42 3 1176 5315 142 66 15 chrX 77523164 77523405 -89126891 - L1_Mus2 LINE L1 0 6584 6347 3 1176 516 16 0 0 chrX 77523405 77523466 -89126830 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 1176 32218 100 19 17 chrX 77523466 77529219 -89121077 - L1_Mus2 LINE L1 -220 6346 549 3 1176 355 138 0 0 chrX 77529219 77529277 -89121019 + MTB LTR MaLR 343 400 0 3 1176 782 191 102 41 chrX 77529277 77529628 -89120668 - Lx2B LINE L1 -1 6999 6771 3 1176 225 191 0 21 chrX 77529644 77529692 -89120604 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1176 525 16 0 0 chrX 77529790 77529852 -89120444 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 1176 6401 14 0 0 chrX 77530383 77531144 -89119152 + MT-int LTR MaLR 200 960 -138 3 1176 217 415 11 11 chrX 77531244 77531339 -89118957 - MIRb SINE MIR -168 100 6 4 1176 494 31 16 0 chrX 77531467 77531531 -89118765 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 1176 261 303 0 154 chrX 77531920 77532037 -89118259 + PB1 SINE Alu 26 124 -3 4 1176 220 368 56 49 chrX 77532134 77532277 -89118019 - ID_B1 SINE B4 -2 222 79 4 1176 27 49 0 0 chrX 77532475 77532516 -89117780 + AT_rich Low_complexity Low_complexity 1 41 0 4 1176 21 0 0 0 chrX 77533411 77533432 -89116864 + AT_rich Low_complexity Low_complexity 1 21 0 4 1176 12217 127 16 3 chrX 77533432 77535640 -89114656 - L1_Mus3 LINE L1 -3 6635 4401 4 1176 3345 33 5 0 chrX 77535640 77536034 -89114262 - MTA_Mm LTR MaLR 0 396 1 4 1176 12217 150 23 5 chrX 77536034 77536197 -89114099 - L1_Mus3 LINE L1 -1483 4400 4243 4 1176 3161 50 8 0 chrX 77536197 77536579 -89113717 + IAPEY_LTR LTR ERVK 1 385 0 4 1176 12217 150 23 5 chrX 77536579 77537092 -89113204 - L1_Mus3 LINE L1 -1641 4242 3713 4 1176 2617 242 21 24 chrX 77537084 77537806 -89112490 - L1VL4 LINE L1 -5415 887 168 4 1176 700 70 45 39 chrX 77538305 77538484 -89111812 + (TA)n Simple_repeat Simple_repeat 1 180 0 5 1176 298 320 38 38 chrX 77538646 77538779 -89111517 + LTR52 LTR ERVL 1 133 -288 5 1176 189 0 0 0 chrX 77538815 77538836 -89111460 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1176 775 261 47 13 chrX 77538880 77539113 -89111183 + Lx9 LINE L1 7201 7441 -203 5 1176 501 62 0 0 chrX 77539153 77539218 -89111078 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 1176 436 161 89 19 chrX 77539252 77539410 -89110886 + Lx9 LINE L1 7472 7640 -4 5 1176 227 372 9 26 chrX 77540269 77540385 -89109911 + MLT1J-int LTR MaLR 682 795 -592 5 1176 728 303 121 16 chrX 77540482 77540787 -89109509 + MTD LTR MaLR 68 404 -15 5 1176 239 337 74 0 chrX 77540830 77540925 -89109371 + MLT1J-int LTR MaLR 891 992 -395 5 1176 2825 122 4 11 chrX 77541274 77541728 -89108568 + Lx LINE L1 6203 6653 -1 5 1176 189 0 0 0 chrX 77542030 77542051 -89108245 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 5 1176 1009 90 0 0 chrX 77542057 77542190 -89108106 - L1_Mus1 LINE L1 -306 6261 6129 5 1176 2341 78 3 0 chrX 77542190 77542499 -89107797 + L1_Mus1 LINE L1 6258 6567 0 5 1176 206 232 0 0 chrX 77543326 77543382 -89106914 + T-rich Low_complexity Low_complexity 1 56 0 6 1176 229 200 60 0 chrX 77544710 77544760 -89105536 + CT-rich Low_complexity Low_complexity 5 57 0 6 1176 222 238 58 87 chrX 77545034 77545172 -89105124 + L3 LINE CR1 137 270 -4219 6 1176 1950 209 20 72 chrX 77545330 77545699 -89104597 - MTC LTR MaLR -1 420 81 6 1176 1247 62 0 0 chrX 77545699 77545861 -89104435 - L1_Mus1 LINE L1 0 6567 6406 6 1176 1950 209 20 72 chrX 77545861 77545934 -89104362 - MTC LTR MaLR -341 80 1 6 1176 25 31 0 0 chrX 77546607 77546639 -89103657 + AT_rich Low_complexity Low_complexity 1 32 0 6 1176 8925 101 58 15 chrX 77546639 77547694 -89102602 - Lx3_Mus LINE L1 0 7009 5907 6 1176 703 0 11 11 chrX 77547694 77547782 -89102514 + (TTTC)n Simple_repeat Simple_repeat 2 89 0 6 1176 31203 111 37 20 chrX 77547782 77553344 -89096952 - Lx3_Mus LINE L1 -1103 5906 10 6 1176 26 30 0 0 chrX 77553673 77553706 -89096590 + AT_rich Low_complexity Low_complexity 1 33 0 6 1176 730 290 73 15 chrX 77554570 77554829 -89095467 - Lx8 LINE L1 -374 7099 6826 6 1176 21143 181 19 32 chrX 77554840 77559219 -89091077 + L1_Mus4 LINE L1 549 4986 -897 7 1176 4886 49 2 2 chrX 77559219 77559828 -89090468 + L1Md_F2 LINE L1 5973 6581 -1 7 1176 21143 165 42 23 chrX 77559828 77561561 -89088735 + L1_Mus4 LINE L1 4987 6629 -7 7 1176 967 261 55 13 chrX 77561595 77561861 -89088435 - Lx6 LINE L1 -210 7250 6993 7 1176 189 398 25 25 chrX 77562117 77562238 -89088058 - L2c LINE L2 -43 3344 3224 7 1176 4642 38 0 0 chrX 77562354 77562902 -89087394 + L1Md_T LINE L1 6035 6582 0 7 1176 276 298 21 11 chrX 77563087 77563182 -89087114 + CT-rich Low_complexity Low_complexity 4 99 0 7 1176 313 299 96 22 chrX 77563394 77563572 -89086724 - B3A SINE B2 -6 192 2 7 1176 34 0 0 0 chrX 77563774 77563808 -89086488 + AT_rich Low_complexity Low_complexity 1 34 0 7 1176 29010 117 23 3 chrX 77563808 77569838 -89080458 - L1_Mus1 LINE L1 -4 6563 411 7 1176 431 35 0 17 chrX 77571095 77571153 -89079143 + (TAA)n Simple_repeat Simple_repeat 2 58 0 7 1176 3719 129 20 0 chrX 77572041 77572601 -89077695 + Lx2A1 LINE L1 6417 6987 -21 8 1176 231 88 0 0 chrX 77572601 77572635 -89077661 + (ATG)n Simple_repeat Simple_repeat 1 34 0 8 1176 180 182 0 0 chrX 77572635 77572679 -89077617 + GA-rich Low_complexity Low_complexity 2 45 0 8 1176 702 65 0 0 chrX 77572680 77572772 -89077524 + (GAA)n Simple_repeat Simple_repeat 2 93 0 8 1176 283 445 0 18 chrX 77572841 77573008 -89077288 + B3A SINE B2 1 164 -34 8 1176 521 15 15 0 chrX 77573010 77573076 -89077220 + (CA)n Simple_repeat Simple_repeat 2 68 0 8 1176 322 305 81 47 chrX 77574703 77574875 -89075421 - MamRep605 Unknown Unknown -549 327 150 8 1176 483 18 0 0 chrX 77575007 77575063 -89075233 + (TA)n Simple_repeat Simple_repeat 1 56 0 8 1176 228 265 32 57 chrX 77576064 77576188 -89074108 + Lx8 LINE L1 7353 7473 0 8 1176 233 329 14 14 chrX 77576565 77576639 -89073657 - ID4_ SINE ID 0 83 10 8 1176 3568 73 21 0 chrX 77576865 77577330 -89072966 - MT2C_Mm LTR ERVL 0 475 1 9 1176 314 0 0 0 chrX 77577330 77577368 -89072928 - MERVL-int LTR ERVL 0 5485 5448 9 1176 338 153 26 53 chrX 77577368 77577444 -89072852 - ORR1A3-int LTR MaLR -1323 640 567 9 1176 42871 56 9 6 chrX 77577444 77582794 -89067502 - MERVL-int LTR ERVL -114 5371 3 9 1176 3443 80 11 63 chrX 77582795 77583315 -89066981 - MT2C_Mm LTR ERVL 0 493 1 9 1176 265 351 56 50 chrX 77583374 77583554 -89066742 + ORR1E LTR MaLR 15 195 -164 9 1176 401 305 95 29 chrX 77583716 77584167 -89066129 - L1MB7 LINE L1 -47 6127 5652 9 1176 25025 129 9 10 chrX 77584163 77589085 -89061211 - L1_Mus2 LINE L1 -1 6565 1651 9 1176 194 57 0 54 chrX 77589313 77589350 -89060946 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 9 18 21811 153 72 42 chrX 77590187 77596531 -89053765 + Lx3B LINE L1 31 6973 0 9 1177 482 325 6 6 chrX 77596662 77596820 -89053476 + RSINE1 SINE B4 2 159 -6 9 1177 941 162 87 19 chrX 77597260 77597467 -89052829 + Lx LINE L1 6357 6577 -77 9 1177 1962 45 8 0 chrX 77597648 77597890 -89052406 - L1Md_F2 LINE L1 -1 6581 6338 9 1177 3229 78 5 5 chrX 77597960 77598438 -89051858 - L1Md_F2 LINE L1 0 6582 6143 1 1177 297 160 0 0 chrX 77598438 77598474 -89051822 + T-rich Low_complexity Low_complexity 2 37 0 1 1177 602 41 51 0 chrX 77598486 77598584 -89051712 - L1Md_F3 LINE L1 -3 6581 6479 1 1177 690 116 15 8 chrX 77598599 77598729 -89051567 - L1_Mus3 LINE L1 -22 6616 6486 1 1177 261 0 0 0 chrX 77598805 77598834 -89051462 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 1 1177 782 83 19 0 chrX 77599371 77599479 -89050817 - B2_Mm2 SINE B2 -84 111 2 1 1177 307 254 69 61 chrX 77600431 77600678 -89049618 - Lx9 LINE L1 -1 7643 7395 1 1177 580 402 40 34 chrX 77601073 77601670 -89048626 + Lx8 LINE L1 6721 7321 -152 1 1177 218 273 0 18 chrX 77601674 77601730 -89048566 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1177 22 0 0 0 chrX 77602033 77602055 -89048241 + AT_rich Low_complexity Low_complexity 1 22 0 1 1177 18750 145 22 12 chrX 77602386 77606141 -89044155 + L1VL4 LINE L1 591 4373 -1510 1 1177 7209 83 4 8 chrX 77606114 77607088 -89043208 + L1_Mus1 LINE L1 5598 6567 0 1 1177 5610 136 11 10 chrX 77609407 77610300 -89039996 - Lx3A LINE L1 -82 6899 6006 1 1177 483 100 0 0 chrX 77610327 77610397 -89039899 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 1 1177 33 0 0 0 chrX 77610646 77610679 -89039617 + AT_rich Low_complexity Low_complexity 1 33 0 1 1177 769 206 0 0 chrX 77610872 77611008 -89039288 + ORR1C2 LTR MaLR 235 370 -14 1 1177 500 194 0 84 chrX 77611017 77611124 -89039172 - RMER5 LTR ERV1 -380 154 57 1 1177 40021 19 2 7 chrX 77611124 77617530 -89032766 - L1Md_A LINE L1 -2 6580 208 1 1177 233 215 42 97 chrX 77617533 77617605 -89032691 - RMER5 LTR ERV1 -466 68 1 1 1177 381 75 0 0 chrX 77617687 77617740 -89032556 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1177 38 22 0 0 chrX 77618449 77618494 -89031802 + AT_rich Low_complexity Low_complexity 1 45 0 1 1177 455 250 16 82 chrX 77618584 77618706 -89031590 - B1_Mur3 SINE Alu -7 142 29 1 1177 1009 118 0 0 chrX 77618813 77618957 -89031339 - B1_Mm SINE Alu 0 147 4 1 1177 2073 107 22 3 chrX 77619002 77619320 -89030976 + Lx LINE L1 6328 6651 -3 1 1177 518 311 33 33 chrX 77619369 77619612 -89030684 - Lx7 LINE L1 -1359 6337 6095 1 1177 334 271 10 0 chrX 77619663 77619759 -89030537 - Lx7 LINE L1 -13 5867 5771 1 1177 706 266 80 44 chrX 77619880 77620017 -89030279 - Lx7 LINE L1 -1051 4829 4683 1 1177 1348 225 16 7 chrX 77620017 77620036 -89030260 - Lx4B LINE L1 0 7058 7040 1 1177 861 100 0 0 chrX 77620036 77620166 -89030130 + (TTCC)n Simple_repeat Simple_repeat 3 132 0 1 1177 1348 225 16 7 chrX 77620166 77620455 -89029841 - Lx4B LINE L1 -19 7039 6747 1 1177 706 266 80 44 chrX 77620455 77620706 -89029590 - Lx7 LINE L1 -1198 4682 4427 1 1177 4136 58 2 2 chrX 77620815 77621336 -89028960 - L1Md_F2 LINE L1 -1 6581 6061 1 1177 2426 264 62 56 chrX 77621782 77622312 -89027984 - ORR1D1-int LTR MaLR -181 1189 651 1 1177 414 79 0 0 chrX 77622312 77622375 -89027921 + (TCTCTG)n Simple_repeat Simple_repeat 2 64 0 1 1177 2426 264 62 56 chrX 77622375 77622662 -89027634 - ORR1D1-int LTR MaLR -720 650 368 1 1177 5306 109 8 4 chrX 77622664 77624117 -89026179 + L1VL4 LINE L1 213 1671 -1888 1 1177 37265 19 0 8 chrX 77624118 77629292 -89021004 + L1Md_A LINE L1 459 5586 -297 1 1177 8571 25 0 0 chrX 77629292 77630287 -89020009 + L1Md_A LINE L1 5587 6581 -1 1 1177 13253 184 121 34 chrX 77630288 77633590 -89016706 + L1_Mur1 LINE L1 2002 5590 -296 1 1177 8165 38 3 3 chrX 77633590 77634574 -89015722 + L1Md_F2 LINE L1 5588 6571 -11 1 1177 8050 191 49 47 chrX 77634575 77636425 -89013871 + L1Md_F2 LINE L1 3717 5569 -314 1 1177 3785 182 1 16 chrX 77636421 77637097 -89013199 + Lx LINE L1 5962 6627 -27 1 1177 1456 89 44 4 chrX 77637145 77637370 -89012926 - L1_Mus3 LINE L1 -2 6636 6403 1 1177 6158 95 7 1 chrX 77637396 77638259 -89012037 + L1Md_F2 LINE L1 5704 6571 -11 1 1177 5866 174 13 3 chrX 77638397 77639441 -89010855 + Lx2 LINE L1 5564 6632 -365 1 1177 1200 127 59 0 chrX 77639441 77639661 -89010635 + Lx2 LINE L1 6763 6995 -2 1 1177 367 271 0 12 chrX 77639681 77639767 -89010529 - B3A SINE B2 -113 85 1 1 1177 1585 237 33 0 chrX 77639913 77640276 -89010020 - ORR1D1-int LTR MaLR -995 375 1 1 1177 316 193 0 22 chrX 77640276 77640354 -89009942 - ORR1D1 LTR MaLR 0 374 300 1 1177 3806 188 65 100 chrX 77640360 77641277 -89009019 + RMER19B LTR ERVK 1 885 -17 1 1177 1043 79 0 14 chrX 77641277 77641418 -89008878 + B1_Mus1 SINE Alu 1 139 -9 1 1177 189 0 0 0 chrX 77641418 77641439 -89008857 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 1177 647 298 162 39 chrX 77641445 77641728 -89008568 - ORR1D1 LTR MaLR -56 318 1 1 1177 34 24 0 0 chrX 77641810 77641851 -89008445 + AT_rich Low_complexity Low_complexity 1 41 0 1 1177 424 273 30 15 chrX 77642523 77642697 -89007599 - L1M2 LINE L1 -472 5819 5636 1 1177 492 18 0 0 chrX 77642739 77642796 -89007500 + (A)n Simple_repeat Simple_repeat 1 57 0 1 1177 3738 161 44 30 chrX 77643576 77644281 -89006015 - Lx2B LINE L1 -6 6994 6280 1 1177 282 153 278 0 chrX 77644294 77644366 -89005930 - L1_Mur2 LINE L1 -2046 3840 3749 1 1177 1057 226 66 4 chrX 77644505 77644763 -89005533 - Lx4B LINE L1 -335 6723 6450 1 1177 365 98 0 0 chrX 77644768 77644819 -89005477 + L1_Mur3 LINE L1 5081 5131 -749 1 1177 23540 127 4 153 chrX 77644821 77647044 -89003252 - Lx4B LINE L1 -1215 5843 4418 1 1177 1907 39 0 4 chrX 77647044 77647279 -89003017 - L1Md_F3 LINE L1 -14 6570 6337 1 1177 23540 131 5 129 chrX 77647279 77651321 -88998975 - Lx4B LINE L1 -1466 4417 441 1 1177 10772 192 35 24 chrX 77651335 77651425 -88998871 - L1_Mur2 LINE L1 -2127 3750 3666 1 1177 252 0 0 0 chrX 77651425 77651453 -88998843 + (TCCC)n Simple_repeat Simple_repeat 1 28 0 1 1177 504 0 0 0 chrX 77651453 77651509 -88998787 + (TTTC)n Simple_repeat Simple_repeat 3 58 0 1 1177 10772 192 35 24 chrX 77651509 77653138 -88997158 - L1_Mur2 LINE L1 -2212 3665 2054 1 1177 369 0 0 0 chrX 77653138 77653179 -88997117 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1177 504 0 0 0 chrX 77653179 77653234 -88997062 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 1177 10772 192 35 24 chrX 77653234 77653980 -88996316 - L1_Mur2 LINE L1 -3824 2053 1256 1 1177 216 67 0 0 chrX 77653980 77654010 -88996286 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 1177 10772 223 90 7 chrX 77654010 77654421 -88995875 - L1_Mur2 LINE L1 -4622 1255 805 1 1177 2078 201 36 23 chrX 77654573 77655117 -88995179 - RLTR31A_Mm LTR ERVK 0 561 1 1 1177 628 339 74 14 chrX 77655271 77655555 -88994741 + MLT1E3 LTR MaLR 259 559 -65 1 1177 467 322 72 52 chrX 77655762 77656207 -88994089 - L1MC LINE L1 -1621 4525 4072 1 1177 26 88 0 0 chrX 77656348 77656416 -88993880 + AT_rich Low_complexity Low_complexity 1 68 0 1 1177 485 240 15 31 chrX 77656523 77656653 -88993643 - L1_Rod LINE L1 -668 5574 5422 1 1177 7161 106 4 16 chrX 77656668 77658447 -88991849 - L1_Mus2 LINE L1 -1 6565 4811 1 1177 3833 178 33 53 chrX 77658447 77659272 -88991024 + RLTR13C2 LTR ERVK 1 808 0 1 1177 6330 135 6 1 chrX 77659284 77660325 -88989971 - L1_Mus2 LINE L1 -1094 4789 3744 1 1177 9236 127 34 6 chrX 77660321 77660946 -88989350 - MusHAL1 LINE L1 -1063 1649 1020 1 1177 387 0 0 0 chrX 77660946 77660989 -88989307 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1177 9236 127 34 6 chrX 77660989 77661710 -88988586 - MusHAL1 LINE L1 -1693 1019 283 1 1177 2907 85 15 10 chrX 77661710 77662113 -88988183 - L1Md_F2 LINE L1 0 6582 6178 1 1177 9236 127 34 6 chrX 77662113 77662368 -88987928 - MusHAL1 LINE L1 -2430 282 2 1 1177 2846 218 50 19 chrX 77662334 77663101 -88987195 - L1_Mus2 LINE L1 -5380 1236 510 1 1177 685 227 20 106 chrX 77663132 77663378 -88986918 - L1VL1 LINE L1 -5998 424 200 1 1177 1359 29 21 0 chrX 77663399 77663819 -88986477 + (TTTC)n Simple_repeat Simple_repeat 1 428 0 1 1177 487 292 20 41 chrX 77663841 77663859 -88986437 - ID_B1 SINE B4 -46 246 194 1 1177 942 104 15 0 chrX 77663859 77663994 -88986302 - B1_Mus1 SINE Alu -1 147 11 1 1177 487 292 20 41 chrX 77663994 77664039 -88986257 - ID_B1 SINE B4 -46 193 48 1 1177 239 190 33 49 chrX 77664049 77664110 -88986186 - L1_Mus2 LINE L1 -5882 734 675 1 1177 354 261 29 29 chrX 77664168 77664306 -88985990 - L1_Rod LINE L1 -416 5431 5294 1 1177 2707 190 75 2 chrX 77664300 77664823 -88985473 - Lx LINE L1 0 6654 6094 1 1177 2127 89 13 0 chrX 77664817 77665119 -88985177 - Lx2 LINE L1 -1087 5910 5605 1 1177 21 36 0 0 chrX 77665159 77665187 -88985109 + AT_rich Low_complexity Low_complexity 1 28 0 1 1177 642 233 0 0 chrX 77665447 77665627 -88984669 + A-rich Low_complexity Low_complexity 1 180 0 1 1177 1070 83 0 27 chrX 77665648 77665786 -88984510 + B1_Mm SINE Alu 1 138 -9 1 1177 320 0 71 18 chrX 77665786 77665842 -88984454 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 1 1177 21 36 0 0 chrX 77666168 77666196 -88984100 + AT_rich Low_complexity Low_complexity 1 28 0 1 1177 26 50 0 0 chrX 77666365 77666405 -88983891 + AT_rich Low_complexity Low_complexity 1 40 0 1 1177 1041 280 75 73 chrX 77666679 77667103 -88983193 + Lx8 LINE L1 7047 7471 -2 1 1177 351 0 0 0 chrX 77667894 77667933 -88982363 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1177 233 121 0 0 chrX 77667938 77667971 -88982325 + Lx9 LINE L1 6601 6633 -1011 1 1177 1124 304 20 31 chrX 77667984 77668436 -88981860 + Lx9 LINE L1 6972 7418 -226 1 1177 200 296 131 41 chrX 77668799 77668944 -88981352 - MIRc SINE MIR -123 153 1 1 1177 1526 205 82 26 chrX 77669405 77669745 -88980551 - ORR1B2 LTR MaLR -8 359 1 1 1177 279 369 0 32 chrX 77670348 77670474 -88979822 + MLT1F2 LTR MaLR 429 550 -10 1 1177 321 68 0 0 chrX 77670497 77670541 -88979755 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1177 467 112 0 12 chrX 77670619 77670700 -88979596 + (TA)n Simple_repeat Simple_repeat 2 81 0 1 1177 2539 85 15 0 chrX 77670733 77671074 -88979222 - ORR1A1 LTR MaLR 0 346 1 1 1177 730 187 7 7 chrX 77671241 77671392 -88978904 + L1_Mur2 LINE L1 4684 4834 -1043 1 1177 23 0 0 0 chrX 77671394 77671417 -88978879 + AT_rich Low_complexity Low_complexity 1 23 0 1 1177 419 335 56 56 chrX 77671500 77671696 -88978600 + B3A SINE B2 3 198 0 1 1177 22 35 0 0 chrX 77672157 77672186 -88978110 + AT_rich Low_complexity Low_complexity 1 29 0 1 1177 21 36 0 0 chrX 77672449 77672477 -88977819 + AT_rich Low_complexity Low_complexity 1 28 0 1 1177 1806 75 17 0 chrX 77672789 77673030 -88977266 - L1_Mus1 LINE L1 0 6567 6323 1 1177 821 67 0 0 chrX 77673030 77673135 -88977161 + L1_Mus1 LINE L1 6230 6334 -233 1 1177 299 247 122 10 chrX 77673139 77673237 -88977059 + Lx7 LINE L1 7567 7675 -21 1 1177 361 35 0 49 chrX 77673248 77673309 -88976987 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 1 1177 4602 199 48 2 chrX 77673310 77674217 -88976079 - Lx2B LINE L1 -30 6970 6022 1 1177 8705 131 40 1 chrX 77674261 77674972 -88975324 - L1VL1 LINE L1 -1128 2570 1814 1 1177 270 0 0 0 chrX 77674972 77675002 -88975294 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1 1177 8705 126 37 9 chrX 77675002 77675950 -88974346 - L1VL1 LINE L1 -1885 1813 868 1 1177 2987 59 2 23 chrX 77675950 77676348 -88973948 + L1Md_F2 LINE L1 6193 6582 0 1 1177 5761 114 28 31 chrX 77676348 77677010 -88973286 - L1VL1 LINE L1 -5555 867 193 1 1177 3523 221 119 32 chrX 77677039 77677492 -88972804 - L1_Mur3 LINE L1 -3305 2575 2062 1 1177 189 0 0 0 chrX 77677492 77677513 -88972783 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1177 3523 221 119 32 chrX 77677513 77678133 -88972163 - L1_Mur3 LINE L1 -3819 2061 1369 1 1177 3795 55 0 2 chrX 77678133 77678606 -88971690 + L1Md_F2 LINE L1 6098 6569 -13 2 1177 3627 221 88 27 chrX 77678606 77678883 -88971413 - L1_Mur3 LINE L1 -4512 1368 1109 1 1177 444 37 0 0 chrX 77678883 77678937 -88971359 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1177 3627 222 22 16 chrX 77678937 77679538 -88970758 - L1_Mur3 LINE L1 -6620 1108 509 1 1177 4473 210 37 55 chrX 77679591 77680228 -88970068 + RLTR21 LTR ERVK 7 611 -961 2 1177 1998 63 0 0 chrX 77680228 77680482 -88969814 + L1_Mus1 LINE L1 6313 6566 -1 2 1177 4473 210 37 55 chrX 77680482 77680706 -88969590 + RLTR21 LTR ERVK 612 859 -713 2 1177 2623 31 0 45 chrX 77680706 77681043 -88969253 - RLTRETN_Mm LTR ERVK 0 322 1 2 1177 4473 210 37 55 chrX 77681043 77681235 -88969061 + RLTR21 LTR ERVK 860 1041 -531 2 1177 573 56 33 0 chrX 77681262 77681352 -88968944 + (TATG)n Simple_repeat Simple_repeat 3 95 0 2 1177 183 42 0 0 chrX 77681386 77681410 -88968886 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 1177 21 0 0 0 chrX 77681923 77681944 -88968352 + AT_rich Low_complexity Low_complexity 1 21 0 2 1177 183 100 0 0 chrX 77681965 77681995 -88968301 + (CTATT)n Simple_repeat Simple_repeat 2 31 0 2 1177 21 57 0 0 chrX 77682039 77682074 -88968222 + AT_rich Low_complexity Low_complexity 1 35 0 2 1177 1141 75 7 0 chrX 77682547 77682693 -88967603 + B1_Mus1 SINE Alu 2 148 0 2 1177 2119 231 47 17 chrX 77683687 77684344 -88965952 - Lx6 LINE L1 -1471 5989 5306 2 1177 1098 75 7 0 chrX 77684344 77684490 -88965806 + B1_Mm SINE Alu 1 147 0 2 1177 333 0 0 0 chrX 77684676 77684713 -88965583 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1177 240 273 30 15 chrX 77684797 77684864 -88965432 - B1F SINE Alu -81 68 1 2 1177 5578 88 17 1 chrX 77685117 77685882 -88964414 + L1Md_F2 LINE L1 5785 6561 -21 2 1177 222 37 0 0 chrX 77685882 77685909 -88964387 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1177 227 250 0 18 chrX 77687123 77687180 -88963116 - MER102a DNA MER1_type -181 149 94 2 1177 687 35 0 0 chrX 77687258 77687344 -88962952 + (CA)n Simple_repeat Simple_repeat 2 87 0 2 1177 640 270 90 8 chrX 77689103 77689424 -88960872 - L1MB7 LINE L1 -178 5996 5652 2 1177 6913 108 29 2 chrX 77689430 77690992 -88959304 - L1_Mus3 LINE L1 -1 6637 5025 2 1177 1565 66 166 5 chrX 77691112 77691504 -88958792 - MT2C_Mm LTR ERVL -20 455 1 2 1177 262 213 84 123 chrX 77691504 77691560 -88958736 - ORR1A3-int LTR MaLR -1356 607 558 2 1177 334 153 26 53 chrX 77691542 77691618 -88958678 - ORR1A3-int LTR MaLR -1323 640 567 2 1177 39972 78 17 7 chrX 77691737 77691953 -88958343 - MERVL-int LTR ERVL -136 5349 5140 2 1177 2430 106 3 65 chrX 77691953 77692336 -88957960 + RLTR10D LTR ERVK 1 359 0 2 1177 39972 78 17 7 chrX 77692336 77697415 -88952881 - MERVL-int LTR ERVL -346 5139 1 2 1177 3406 84 24 6 chrX 77697415 77697882 -88952414 - MT2C_Mm LTR ERVL 0 475 1 2 1177 234 143 0 0 chrX 77698124 77698173 -88952123 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1177 396 0 0 0 chrX 77698747 77698791 -88951505 + (TA)n Simple_repeat Simple_repeat 1 44 0 2 1177 5072 118 11 3 chrX 77699164 77700058 -88950238 - L1_Mus4 LINE L1 -1 6565 5650 2 1177 3815 167 11 0 chrX 77700059 77700728 -88949568 + L1_Mus4 LINE L1 4974 5649 -234 2 1177 731 72 0 0 chrX 77700740 77700837 -88949459 + B1_Mm SINE Alu 5 101 -46 2 1177 295 293 120 14 chrX 77701047 77701189 -88949107 - MLT1A1 LTR MaLR -23 385 229 2 1177 180 216 0 0 chrX 77702757 77702808 -88947488 + (TGG)n Simple_repeat Simple_repeat 1 51 0 2 1177 206 319 0 0 chrX 77702820 77702889 -88947407 + (TGG)n Simple_repeat Simple_repeat 1 69 0 2 1177 4034 78 5 24 chrX 77702938 77703532 -88946764 + RLTR19-int LTR ERVK 1430 2012 -4125 2 1177 24 32 0 0 chrX 77703888 77703919 -88946377 + AT_rich Low_complexity Low_complexity 1 31 0 2 1177 180 0 0 0 chrX 77706157 77706177 -88944119 + (TC)n Simple_repeat Simple_repeat 1 20 0 2 1177 450 108 0 0 chrX 77706195 77706269 -88944027 + (TG)n Simple_repeat Simple_repeat 2 75 0 2 1177 23 54 0 0 chrX 77706399 77706436 -88943860 + AT_rich Low_complexity Low_complexity 1 37 0 2 1177 242 164 56 56 chrX 77706535 77706606 -88943690 + RLTR11A2 LTR ERVK 404 474 -53 2 1177 1064 99 0 14 chrX 77706702 77706839 -88943457 + B1_Mm SINE Alu 1 137 -10 2 1177 452 18 0 17 chrX 77706839 77706897 -88943399 + (CAAAA)n Simple_repeat Simple_repeat 2 58 0 2 1177 4198 138 11 1 chrX 77706903 77707614 -88942682 + L1_Mur2 LINE L1 2143 2860 -3017 2 1177 22 0 0 0 chrX 77708417 77708439 -88941857 + AT_rich Low_complexity Low_complexity 1 22 0 2 1177 912 201 65 72 chrX 77708601 77708963 -88941333 - RLTRETN_Mm LTR ERVK 0 409 1 2 1177 1099 273 119 44 chrX 77709085 77709472 -88940824 - MTD LTR MaLR -3 416 1 2 1177 281 284 0 56 chrX 77709482 77709624 -88940672 - Lx7 LINE L1 -154 7542 7409 2 1177 441 0 0 0 chrX 77709676 77709725 -88940571 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 1177 275 333 0 0 chrX 77709726 77709798 -88940498 - Lx7 LINE L1 -810 6886 6815 2 1177 512 227 0 35 chrX 77709802 77709905 -88940391 - RMER6D LTR ERVK -4 716 618 2 1177 1697 181 29 85 chrX 77709905 77710280 -88940016 - ORR1B1 LTR MaLR 0 394 41 2 1177 372 161 0 0 chrX 77710286 77710342 -88939954 - RMER6D LTR ERVK -110 610 555 2 1177 24 0 0 0 chrX 77710342 77710366 -88939930 + AT_rich Low_complexity Low_complexity 1 24 0 2 1177 701 205 12 49 chrX 77710379 77710543 -88939753 - Lx3C LINE L1 -9 6967 6810 2 1177 365 113 0 0 chrX 77710545 77710598 -88939698 + L1_Mur1 LINE L1 5085 5137 -749 2 1177 695 162 0 0 chrX 77710599 77710704 -88939592 + L1VL1 LINE L1 403 507 -6131 2 1177 5195 80 17 1 chrX 77710700 77711998 -88938298 + L1VL1 LINE L1 639 1959 -3924 2 1177 38239 12 0 7 chrX 77711999 77717439 -88932857 + L1Md_A LINE L1 214 5611 -272 2 1177 383 18 18 0 chrX 77717439 77717495 -88932801 + L1Md_A LINE L1 6526 6582 0 2 1177 7332 116 2 3 chrX 77717495 77718627 -88931669 + L1VL1 LINE L1 1955 3085 -2798 2 1177 1200 120 0 25 chrX 77718627 77718824 -88931472 + L1_Mus1 LINE L1 6372 6563 -4 2 1177 1349 143 8 20 chrX 77718837 77719087 -88931209 + L1_Mur1 LINE L1 5125 5371 -515 2 1177 304 253 99 0 chrX 77719088 77719179 -88931117 + L1VL2 LINE L1 56 155 -6180 2 1177 2470 221 85 106 chrX 77719180 77720093 -88930203 + RLTR13D6 LTR ERVK 1 894 -8 2 1177 5351 152 67 37 chrX 77720099 77721740 -88928556 + ETnERV2-int LTR ERVK 3 3187 -4219 2 1177 7180 186 45 10 chrX 77721760 77723429 -88926867 + L1_Mur1 LINE L1 2298 4014 -1872 2 1177 2492 186 33 7 chrX 77723422 77723969 -88926327 + L1_Mm LINE L1 4430 4990 -893 2 1177 285 234 135 25 chrX 77723961 77724174 -88926122 + L1M4b LINE L1 3490 3674 -3660 2 1177 305 149 40 0 chrX 77724218 77724292 -88926004 + T-rich Low_complexity Low_complexity 1 77 0 2 1177 248 282 43 71 chrX 77724688 77724829 -88925467 + MIR SINE MIR 65 201 -61 2 147 8341 110 14 8 chrX 77724954 77726021 -88924275 + Lx3_Mus LINE L1 5676 6752 -257 2 1178 4504 62 10 19 chrX 77726021 77726613 -88923683 - LTRIS_Mus LTR ERV1 0 587 1 2 1178 8341 110 14 8 chrX 77726613 77726860 -88923436 + Lx3_Mus LINE L1 6753 6999 -10 2 1178 1059 76 0 0 chrX 77727670 77727802 -88922494 + B1_Mus1 SINE Alu 2 133 -15 2 1178 478 0 0 31 chrX 77728307 77728371 -88921925 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 1178 21 57 0 0 chrX 77728802 77728837 -88921459 + AT_rich Low_complexity Low_complexity 1 35 0 2 1178 713 254 15 9 chrX 77729057 77729354 -88920942 - Lx7 LINE L1 -1710 5934 5611 2 1178 675 67 0 0 chrX 77729414 77729503 -88920793 + (TA)n Simple_repeat Simple_repeat 2 90 0 2 1178 270 236 18 0 chrX 77729503 77729558 -88920738 + MTEa LTR MaLR 213 268 -111 2 1178 674 289 133 36 chrX 77729570 77729907 -88920389 - ORR1D2 LTR MaLR 0 370 1 2 1178 933 304 58 98 chrX 77729918 77730086 -88920210 - MTE2b LTR MaLR -2 377 214 2 1178 1142 95 0 0 chrX 77730086 77730233 -88920063 + B1_Mus2 SINE Alu 1 147 0 2 1178 933 304 58 98 chrX 77730233 77730440 -88919856 - MTE2b LTR MaLR -166 213 17 2 1178 1137 290 67 29 chrX 77730536 77730984 -88919312 + MTE-int LTR MaLR 35 499 -1081 2 1178 669 56 0 0 chrX 77730991 77731081 -88919215 + (TC)n Simple_repeat Simple_repeat 1 90 0 2 1178 7815 143 63 14 chrX 77731098 77733789 -88916507 - Lx4A LINE L1 -2 7056 4239 2 1178 914 182 89 0 chrX 77733783 77734019 -88916277 - Lx4A LINE L1 -2452 3425 3169 2 1178 30120 82 1 3 chrX 77734049 77739258 -88911038 + L1Md_F2 LINE L1 387 5586 -297 2 1178 7993 52 1 2 chrX 77739259 77740246 -88910050 + L1Md_F2 LINE L1 5588 6573 -9 2 1178 1359 209 61 6 chrX 77740247 77740325 -88909971 + L1_Mur2 LINE L1 5364 5455 -422 2 1178 414 39 0 0 chrX 77740325 77740377 -88909919 + (TAAA)n Simple_repeat Simple_repeat 3 54 0 2 1178 1359 209 61 6 chrX 77740377 77740611 -88909685 + L1_Mur2 LINE L1 5456 5692 -185 2 1178 315 23 0 0 chrX 77740612 77740656 -88909640 + L1Md_F2 LINE L1 6527 6570 -12 2 1178 690 148 45 6 chrX 77740656 77740832 -88909464 - Lx4A LINE L1 -2703 3174 2992 2 1178 180 97 0 0 chrX 77740845 77740876 -88909420 + (ATTG)n Simple_repeat Simple_repeat 2 32 0 2 1178 3285 120 46 3 chrX 77740878 77741448 -88908848 - Lx3_Mus LINE L1 -24 6985 6392 2 1178 530 186 76 0 chrX 77741458 77741576 -88908720 - Lx4A LINE L1 -2841 3036 2910 2 1178 360 261 67 30 chrX 77741587 77741721 -88908575 + MTEa LTR MaLR 241 379 0 2 1178 421 382 57 71 chrX 77742901 77743197 -88907099 + B4 SINE B4 1 292 0 2 1178 237 83 0 0 chrX 77743910 77743946 -88906350 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 2 1178 441 298 54 35 chrX 77744024 77744337 -88905959 + L1M2 LINE L1 4275 4593 -1550 2 1178 607 354 42 38 chrX 77744438 77744702 -88905594 + B4A SINE B4 14 278 -14 2 1178 297 0 0 0 chrX 77744785 77744818 -88905478 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1178 369 0 0 0 chrX 77744818 77744858 -88905438 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1178 6166 141 61 1 chrX 77744980 77746030 -88904266 + Lx3B LINE L1 5857 6969 -4 2 1178 270 0 0 0 chrX 77746036 77746066 -88904230 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1178 214 343 0 0 chrX 77746120 77746190 -88904106 + GA-rich Low_complexity Low_complexity 3 72 0 2 1178 693 0 0 0 chrX 77747169 77747246 -88903050 + (GA)n Simple_repeat Simple_repeat 2 78 0 2 1178 4258 153 10 12 chrX 77747547 77748268 -88902028 + Lx3B LINE L1 6250 6968 -5 2 1178 36552 50 1 14 chrX 77748306 77754698 -88895598 - L1Md_A LINE L1 -1 6581 273 2 1178 26 0 0 0 chrX 77754778 77754804 -88895492 + AT_rich Low_complexity Low_complexity 1 26 0 2 1178 2550 174 24 10 chrX 77754804 77755302 -88894994 + Lx4A LINE L1 6103 6607 -451 2 1178 7756 27 13 3 chrX 77755303 77756461 -88893835 - L1Md_T LINE L1 0 6582 5407 2 1178 2162 210 20 2 chrX 77756461 77756909 -88893387 + Lx4A LINE L1 6591 7046 -12 2 1178 33 66 0 0 chrX 77756947 77757008 -88893288 + AT_rich Low_complexity Low_complexity 1 61 0 2 1178 645 199 36 42 chrX 77757015 77757183 -88893113 - Lx4B LINE L1 -791 6267 6101 2 1178 210 71 0 0 chrX 77757593 77757621 -88892675 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 2 1178 202 205 0 0 chrX 77757664 77757703 -88892593 + T-rich Low_complexity Low_complexity 2 40 0 2 1178 462 36 0 0 chrX 77757750 77757806 -88892490 + (TC)n Simple_repeat Simple_repeat 2 57 0 3 1178 297 0 0 0 chrX 77757808 77757841 -88892455 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1178 21 36 0 0 chrX 77758682 77758710 -88891586 + AT_rich Low_complexity Low_complexity 1 28 0 3 1178 8136 138 16 0 chrX 77759025 77760378 -88889918 + Lx2A LINE L1 5623 6997 -11 3 1178 1749 189 61 19 chrX 77760750 77761127 -88889169 + RLTR11A2 LTR ERVK 78 470 -57 3 1178 2797 231 12 125 chrX 77761684 77762646 -88887650 + Lx6 LINE L1 4887 5653 -233 3 1178 1595 232 26 185 chrX 77762646 77763370 -88886926 - RMER19C LTR ERVK 0 611 3 3 1178 2797 216 71 20 chrX 77763370 77764008 -88886288 + Lx6 LINE L1 5642 6375 -675 3 1178 228 316 98 109 chrX 77764044 77764382 -88885914 - L2 LINE L2 -454 2965 2632 3 1178 25 51 0 0 chrX 77765020 77765059 -88885237 + AT_rich Low_complexity Low_complexity 1 39 0 3 1178 295 261 195 74 chrX 77765462 77765652 -88884644 + MER20 DNA MER1_type 1 213 -6 3 1178 827 314 48 29 chrX 77766218 77766757 -88883539 - Lx6 LINE L1 -28 7432 6484 3 1178 424 333 104 28 chrX 77766760 77767130 -88883166 - Lx6 LINE L1 -688 6362 5937 3 1178 1755 177 22 60 chrX 77767249 77767663 -88882633 - RMER10B LTR ERVL 0 398 1 3 1178 1190 203 13 4 chrX 77767663 77767900 -88882396 - Lx6 LINE L1 -197 5683 5445 3 1178 376 237 51 22 chrX 77768739 77768877 -88881419 + Lx9 LINE L1 7492 7633 -11 3 1178 455 311 31 52 chrX 77768877 77769070 -88881226 + B3 SINE B2 1 189 -6 3 1178 7019 86 7 1 chrX 77770588 77771668 -88878628 - L1_Mus1 LINE L1 0 6567 5483 3 1178 2577 279 80 33 chrX 77772419 77772629 -88877667 - RNERVK23-int LTR ERVK -403 7814 7576 3 1178 642 26 0 0 chrX 77772629 77772705 -88877591 + (TC)n Simple_repeat Simple_repeat 2 77 0 3 1178 2577 279 80 33 chrX 77772705 77773678 -88876618 - RNERVK23-int LTR ERVK -642 7575 6575 3 1178 1034 259 10 10 chrX 77775077 77775385 -88874911 - RNERVK23-int LTR ERVK -7728 489 182 3 1178 342 300 12 70 chrX 77775578 77775750 -88874546 - RNLTR23 LTR ERVK 0 642 481 3 1178 1511 78 0 0 chrX 77775828 77776032 -88874264 + L1Md_F2 LINE L1 6367 6570 -12 3 1178 2775 87 2 1 chrX 77776234 77776680 -88873616 - L1VL4 LINE L1 -2302 1257 812 3 1178 297 0 0 0 chrX 77776680 77776713 -88873583 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 3 1178 2775 136 25 12 chrX 77776713 77777049 -88873247 - L1VL4 LINE L1 -5491 811 469 3 1178 428 291 17 67 chrX 77777360 77777599 -88872697 - L1M2 LINE L1 -840 5303 5077 3 1178 297 331 72 3 chrX 77777652 77777943 -88872353 - L1_Mur2 LINE L1 -887 4990 4680 3 1178 207 157 0 0 chrX 77780387 77780438 -88869858 + (CTG)n Simple_repeat Simple_repeat 2 52 0 3 1178 292 218 70 39 chrX 77780626 77780755 -88869541 - L1_Mur2 LINE L1 -1620 4260 4128 3 1178 201 39 0 0 chrX 77780805 77780831 -88869465 + (TTTTG)n Simple_repeat Simple_repeat 4 29 0 3 1178 336 332 75 42 chrX 77780971 77781210 -88869086 - MIR SINE MIR -15 247 1 3 1178 304 327 73 78 chrX 77781486 77781731 -88868565 - L3 LINE CR1 -1045 3444 3201 3 1178 205 308 15 0 chrX 77782749 77782814 -88867482 + CT-rich Low_complexity Low_complexity 3 68 0 3 1178 643 304 58 50 chrX 77783768 77784128 -88866168 + RodERV21-int LTR ERV1 730 1092 -3899 3 1178 4818 279 23 30 chrX 77784335 77785813 -88864483 + RodERV21-int LTR ERV1 1252 2718 -2273 3 1178 36085 43 0 2 chrX 77786512 77792641 -88857655 - L1Md_T LINE L1 0 6585 374 3 1178 250 45 45 0 chrX 77792972 77793016 -88857280 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 3 1178 301 331 28 28 chrX 77793385 77793634 -88856662 + MER52-int LTR ERV1 4870 5118 -1973 3 1178 2181 348 45 47 chrX 77794523 77796606 -88853690 + RodERV21-int LTR ERV1 2710 4789 -202 3 1178 2427 95 18 64 chrX 77796736 77797129 -88853167 + L1_Mus2 LINE L1 6192 6566 0 3 1178 192 40 0 0 chrX 77797372 77797397 -88852899 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1178 423 0 0 0 chrX 77797397 77797443 -88852853 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 1178 1509 225 59 21 chrX 77798628 77799000 -88851296 + RMER10A LTR ERVL 37 422 -20 3 1178 195 204 0 0 chrX 77799020 77799064 -88851232 + CT-rich Low_complexity Low_complexity 3 46 0 3 1178 29532 26 1 1 chrX 77799381 77803054 -88847242 + L1_Mm LINE L1 2145 5818 -65 3 1178 2695 105 56 39 chrX 77803054 77803521 -88846775 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1178 25013 17 3 0 chrX 77803521 77806468 -88843828 - IAPEz-int LTR ERVK 0 6481 3525 3 1178 870 81 24 0 chrX 77806468 77806591 -88843705 - IAPEz-int LTR ERVK -2770 4910 4785 3 1178 1728 115 4 4 chrX 77806588 77806850 -88843446 - IAPEz-int LTR ERVK -5183 2497 2236 3 1178 424 38 0 0 chrX 77806849 77806902 -88843394 - IAPEz-int LTR ERVK -5070 1411 1359 3 1178 3211 78 4 47 chrX 77806902 77807747 -88842549 - IAPEz-int LTR ERVK -5819 662 8 3 1178 2680 98 58 45 chrX 77807747 77808216 -88842080 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1178 6006 69 0 0 chrX 77808216 77808986 -88841310 + L1Md_T LINE L1 5813 6582 0 3 1178 276 222 16 0 chrX 77810478 77810541 -88839755 + RLTR19C LTR ERVK 34 97 -409 3 1178 453 308 20 65 chrX 77810833 77810986 -88839310 + RLTR33 LTR ERVK 447 592 -86 3 1178 905 218 104 122 chrX 77811079 77811638 -88838658 + RLTR19-int LTR ERVK 3413 3961 -2176 3 1178 25310 131 40 3 chrX 77811857 77817605 -88832691 - L1_Mus2 LINE L1 0 6566 591 3 1178 2460 273 17 34 chrX 77817883 77818534 -88831762 + ORR1D1-int LTR MaLR 731 1370 0 3 1178 748 234 15 74 chrX 77818534 77818738 -88831558 + ORR1D1 LTR MaLR 1 181 -193 3 1178 728 221 88 37 chrX 77818769 77818985 -88831311 + ORR1D1 LTR MaLR 148 374 0 3 1178 324 0 0 0 chrX 77819041 77819077 -88831219 + (TC)n Simple_repeat Simple_repeat 2 37 0 3 1178 369 43 0 0 chrX 77819077 77819123 -88831173 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1178 547 303 78 59 chrX 77819139 77819562 -88830734 + Lx8 LINE L1 6350 6807 -837 3 1178 1365 199 40 14 chrX 77819577 77819853 -88830443 - ORR1C2 LTR MaLR -78 306 24 3 1178 405 0 0 0 chrX 77820021 77820066 -88830230 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1178 707 288 28 20 chrX 77820080 77820335 -88829961 - Lx6 LINE L1 -1 7459 7203 3 1178 22 56 0 0 chrX 77820518 77820554 -88829742 + AT_rich Low_complexity Low_complexity 1 36 0 3 1178 303 362 42 14 chrX 77820622 77820765 -88829531 - B1_Mus2 SINE Alu 0 147 1 3 1178 186 103 0 0 chrX 77821140 77821169 -88829127 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1178 282 29 0 0 chrX 77821169 77821204 -88829092 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1178 360 0 0 0 chrX 77821204 77821243 -88829053 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 1178 24 53 0 0 chrX 77822673 77822711 -88827585 + AT_rich Low_complexity Low_complexity 1 38 0 3 1178 291 157 0 0 chrX 77823284 77823335 -88826961 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 1178 23 54 0 0 chrX 77823448 77823485 -88826811 + AT_rich Low_complexity Low_complexity 1 37 0 3 1178 767 265 159 107 chrX 77823552 77823898 -88826398 + MTE2a LTR MaLR 16 379 0 3 1178 31 0 0 0 chrX 77824262 77824293 -88826003 + AT_rich Low_complexity Low_complexity 1 31 0 3 1178 39497 4 0 0 chrX 77824293 77830644 -88819652 - L1Md_A LINE L1 0 6582 232 3 1178 8344 149 13 23 chrX 77830642 77832268 -88818028 - L1VL4 LINE L1 -1752 4131 2522 3 1178 3909 158 20 28 chrX 77832267 77833714 -88816582 - L1VL4 LINE L1 -2035 1879 409 3 1178 26 0 0 0 chrX 77834027 77834053 -88816243 + AT_rich Low_complexity Low_complexity 1 26 0 3 1178 3412 89 2 2 chrX 77834198 77834659 -88815637 - L1_Mus1 LINE L1 -1 6566 6106 3 1178 1728 270 50 14 chrX 77834766 77835266 -88815030 - ORR1D2-int LTR MaLR -852 518 1 3 1178 373 176 0 14 chrX 77835271 77835340 -88814956 - ORR1D2 LTR MaLR -5 365 298 3 1178 1350 133 21 0 chrX 77835340 77835573 -88814723 - Lx LINE L1 -38 6616 6379 3 1178 180 391 18 9 chrX 77836088 77836199 -88814097 - MIRb SINE MIR -135 133 22 3 1178 392 85 0 0 chrX 77836605 77836664 -88813632 + L1_Mur1 LINE L1 4245 4303 -1583 3 1178 23 86 0 0 chrX 77836752 77836810 -88813486 + AT_rich Low_complexity Low_complexity 1 58 0 3 1178 16780 135 47 6 chrX 77836935 77840383 -88809913 - L1_Mus3 LINE L1 -6 6632 3008 3 1178 610 24 0 23 chrX 77840383 77840469 -88809827 + (TTTTG)n Simple_repeat Simple_repeat 2 85 0 3 1178 16780 148 60 7 chrX 77840469 77840986 -88809310 - L1_Mus3 LINE L1 -2876 3007 2484 3 1178 1895 26 0 9 chrX 77841323 77841555 -88808741 + L1Md_F3 LINE L1 6343 6572 -12 3 1178 36915 14 0 3 chrX 77841560 77848578 -88801718 + L1Md_A LINE L1 1 5586 -297 3 1178 8896 12 0 0 chrX 77848578 77849574 -88800722 + L1Md_A LINE L1 5587 6582 0 3 1178 10520 102 25 5 chrX 77849577 77851971 -88798325 + L1_Mus2 LINE L1 4119 6565 -1 3 1178 217 321 112 35 chrX 77852629 77852745 -88797551 - MIR3 SINE MIR -83 125 1 3 1178 2641 78 0 62 chrX 77853097 77853247 -88797049 - L1_Mus2 LINE L1 -583 5983 5858 3 1178 342 0 0 0 chrX 77853247 77853285 -88797011 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1178 324 0 0 0 chrX 77853285 77853320 -88796976 + (GA)n Simple_repeat Simple_repeat 1 36 0 3 1178 5302 136 10 19 chrX 77853320 77854294 -88796002 - L1_Mus2 LINE L1 -709 5857 4873 3 1178 1151 99 0 0 chrX 77854298 77854459 -88795837 + L1_Mus2 LINE L1 6406 6566 0 3 1178 26 0 0 0 chrX 77854732 77854758 -88795538 + AT_rich Low_complexity Low_complexity 1 26 0 3 1178 210 37 0 0 chrX 77855071 77855098 -88795198 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 3 1178 288 0 0 0 chrX 77855146 77855178 -88795118 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1178 4382 179 58 19 chrX 77855178 77856179 -88794117 + L1_Mur2 LINE L1 4747 5786 -91 3 1178 2520 72 42 0 chrX 77856181 77856513 -88793783 - ORR1A1 LTR MaLR 0 346 1 3 147 13285 61 26 1 chrX 77856513 77858261 -88792035 - ORR1A1-int LTR MaLR 0 1792 1 3 1179 2475 67 30 0 chrX 77858265 77858593 -88791703 - ORR1A1 LTR MaLR -8 338 1 3 1179 4832 222 26 31 chrX 77858599 77859865 -88790431 + Lx4B LINE L1 5796 7055 -3 3 1179 191 36 36 0 chrX 77859865 77859893 -88790403 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1179 342 0 0 0 chrX 77860075 77860113 -88790183 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1179 288 0 0 0 chrX 77860130 77860162 -88790134 + (TAGA)n Simple_repeat Simple_repeat 3 34 0 3 1179 1839 245 48 5 chrX 77860406 77860845 -88789451 - Lx6 LINE L1 -5 7455 6998 3 1179 1056 188 31 22 chrX 77860865 77861088 -88789208 - URR1B DNA MER1_type 0 225 1 3 1179 679 194 15 15 chrX 77861361 77861497 -88788799 - B1_Mur3 SINE Alu -1 148 13 3 1179 265 294 103 0 chrX 77862441 77862519 -88787777 + B1_Mm SINE Alu 61 149 -1 3 1179 228 67 0 0 chrX 77862527 77862557 -88787739 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 3 1179 1958 200 19 6 chrX 77862588 77862950 -88787346 + ORR1B2 LTR MaLR 1 367 0 3 1179 4939 138 3 67 chrX 77863254 77863410 -88786886 + Lx LINE L1 5797 5948 -706 3 1179 1317 73 0 0 chrX 77863410 77863588 -88786708 + (GAA)n Simple_repeat Simple_repeat 2 179 0 3 1179 4939 138 3 67 chrX 77863588 77864342 -88785954 + Lx LINE L1 5949 6649 -5 3 1179 479 262 19 0 chrX 77864343 77864446 -88785850 - B3A SINE B2 -92 106 2 3 1179 807 306 36 64 chrX 77864537 77865203 -88785093 - Lx6 LINE L1 -26 7434 6455 4 1179 363 319 16 41 chrX 77865217 77865338 -88784958 - MTD LTR MaLR -221 198 81 4 1179 486 261 56 0 chrX 77865350 77865492 -88784804 + Lx5 LINE L1 5859 6008 -1042 4 1179 674 263 95 28 chrX 77865492 77865703 -88784593 + MTD LTR MaLR 181 405 -14 4 1179 340 265 49 16 chrX 77866000 77866126 -88784170 - L1MEg LINE L1 -5939 261 20 4 1179 227 300 50 0 chrX 77866672 77866732 -88783564 + RSINE1 SINE B4 100 162 -3 4 1179 282 143 0 0 chrX 77866741 77866790 -88783506 + (TC)n Simple_repeat Simple_repeat 1 49 0 4 1179 2217 41 3 107 chrX 77867024 77867379 -88782917 + RLTR10 LTR ERVK 1 318 -72 4 1179 247 167 0 32 chrX 77867400 77867462 -88782834 + RLTR10 LTR ERVK 259 318 -72 4 1179 854 135 32 0 chrX 77867473 77867629 -88782667 + RLTR10 LTR ERVK 227 387 -3 4 1179 343 107 0 0 chrX 77867634 77867690 -88782606 + RLTR10-int LTR ERVK 1 56 -1931 4 1179 6575 55 79 10 chrX 77867691 77868613 -88781683 + RLTR10-int LTR ERVK 13 998 -989 4 1179 324 271 31 8 chrX 77868677 77868807 -88781489 + RLTR10-int LTR ERVK 1462 1594 -5987 4 1179 8482 12 0 1 chrX 77868889 77869885 -88780411 + RLTR10-int LTR ERVK 990 1984 -3 4 1179 2217 41 3 107 chrX 77869887 77870242 -88780054 + RLTR10 LTR ERVK 1 318 -72 4 1179 247 167 0 32 chrX 77870263 77870325 -88779971 + RLTR10 LTR ERVK 259 318 -72 4 1179 928 111 33 0 chrX 77870336 77870489 -88779807 + RLTR10 LTR ERVK 227 384 -6 4 1179 432 200 0 0 chrX 77871317 77871397 -88778899 + Lx6 LINE L1 5857 5936 -1524 4 1179 288 349 28 19 chrX 77872683 77872791 -88777505 + PB1D10 SINE Alu 10 118 -2 4 1179 720 164 26 40 chrX 77873428 77873580 -88776716 - URR1B DNA MER1_type -3 222 73 4 1179 1948 76 29 0 chrX 77873580 77873855 -88776441 - L1_Mus1 LINE L1 -456 6111 5829 4 1179 3624 58 0 5 chrX 77873855 77874304 -88775992 + L1_Mus1 LINE L1 6120 6566 -1 4 1179 516 196 29 0 chrX 77874321 77874423 -88775873 - URR1B DNA MER1_type -121 104 1 4 1179 1074 83 0 76 chrX 77874917 77875074 -88775222 - B1_Mus1 SINE Alu -2 146 2 4 1179 270 0 0 0 chrX 77875456 77875486 -88774810 + (TC)n Simple_repeat Simple_repeat 1 30 0 4 1179 21 0 0 0 chrX 77875699 77875720 -88774576 + AT_rich Low_complexity Low_complexity 1 21 0 4 1179 256 265 72 0 chrX 77875924 77876007 -88774289 - PB1D10 SINE Alu 0 117 29 4 1179 2924 138 45 0 chrX 77876846 77877317 -88772979 + Lx3B LINE L1 6478 6969 -4 4 1179 288 0 0 0 chrX 77877322 77877354 -88772942 + (TAA)n Simple_repeat Simple_repeat 1 32 0 4 1179 647 273 22 55 chrX 77877399 77877760 -88772536 - L1_Rod LINE L1 -2971 2876 2528 4 1179 25 0 0 0 chrX 77878032 77878057 -88772239 + AT_rich Low_complexity Low_complexity 1 25 0 4 1179 276 30 0 0 chrX 77878161 77878194 -88772102 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1179 266 349 31 23 chrX 77878229 77878358 -88771938 - RSINE1 SINE B4 -35 130 1 4 1179 2782 117 5 5 chrX 77878773 77879370 -88770926 - L1_Mus4 LINE L1 0 6636 6205 4 1179 193 229 66 0 chrX 77880220 77880281 -88770015 + L3b LINE CR1 141 205 -277 4 1179 336 102 0 0 chrX 77880281 77880330 -88769966 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1179 399 41 0 0 chrX 77880331 77880380 -88769916 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1179 219 36 0 0 chrX 77880670 77880698 -88769598 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 4 1179 642 89 0 0 chrX 77880914 77881004 -88769292 + (TTTC)n Simple_repeat Simple_repeat 3 92 0 4 1179 1049 131 0 0 chrX 77881011 77881156 -88769140 - B1_Mus2 SINE Alu -2 145 1 4 1179 4952 208 34 6 chrX 77883102 77884610 -88765686 + L1_Mur2 LINE L1 895 2511 -3366 4 1179 4200 158 60 37 chrX 77884610 77885478 -88764818 + RLTR13D6 LTR ERVK 1 862 -40 4 1179 7928 216 57 67 chrX 77885486 77886210 -88764086 + L1_Mur2 LINE L1 2518 3086 -2794 4 1179 459 0 0 0 chrX 77886210 77886261 -88764035 + (TTA)n Simple_repeat Simple_repeat 1 51 0 4 1179 7928 216 57 67 chrX 77886261 77888154 -88762142 + L1_Mur2 LINE L1 3087 5109 -771 4 1179 1053 226 8 13 chrX 77888150 77888387 -88761909 + L1VL4 LINE L1 16 251 -6051 4 1179 2520 118 70 14 chrX 77888387 77888801 -88761495 + RLTR9B LTR ERVK 1 437 0 4 1179 204 163 23 0 chrX 77889064 77889107 -88761189 + A-rich Low_complexity Low_complexity 4 47 0 4 1179 528 45 0 0 chrX 77889118 77889185 -88761111 + (GA)n Simple_repeat Simple_repeat 2 68 0 4 1179 973 132 122 113 chrX 77889185 77889432 -88760864 + RLTR45-int LTR ERVK 2092 2340 -4904 4 1179 33010 87 3 3 chrX 77889489 77895695 -88754601 - L1Md_F2 LINE L1 -12 6570 362 4 1179 3457 74 4 4 chrX 77895698 77896157 -88754139 - L1_Mus1 LINE L1 -17 6550 6092 4 1179 1886 59 0 0 chrX 77896157 77896395 -88753901 + L1_Mus1 LINE L1 5841 6078 -489 4 1179 21 0 0 0 chrX 77896679 77896700 -88753596 + AT_rich Low_complexity Low_complexity 1 21 0 4 1179 390 355 40 80 chrX 77896894 77897219 -88753077 - RLTR25B LTR ERVK -716 312 1 4 1179 612 67 0 0 chrX 77898180 77898270 -88752026 + (TC)n Simple_repeat Simple_repeat 1 90 0 4 1179 21 0 0 0 chrX 77898500 77898521 -88751775 + AT_rich Low_complexity Low_complexity 1 21 0 4 1179 294 186 23 0 chrX 77899258 77899344 -88750952 - MER33 DNA MER1_type -98 226 139 4 1179 2131 98 30 59 chrX 77899745 77900082 -88750214 + ORR1A2 LTR MaLR 1 327 0 4 1179 540 251 96 87 chrX 77900160 77900370 -88749926 + B3A SINE B2 5 213 -3 4 1179 817 89 0 0 chrX 77900841 77900964 -88749332 - L1Md_F2 LINE L1 -12 6570 6448 4 1179 2400 40 23 0 chrX 77900972 77901275 -88749021 - IAPLTR2b LTR ERVK -17 310 1 4 1179 32990 99 10 7 chrX 77901275 77907292 -88743004 - L1Md_F2 LINE L1 -130 6452 422 4 1179 310 346 15 8 chrX 77907293 77907427 -88742869 + MER31B LTR ERV1 220 354 -112 4 1179 21 0 0 0 chrX 77907813 77907834 -88742462 + AT_rich Low_complexity Low_complexity 1 21 0 4 1179 4885 211 37 4 chrX 77907834 77908853 -88741443 - Lx2B LINE L1 -19 6981 5929 4 1179 2824 188 2 2 chrX 77908854 77909386 -88740910 + Lx2B LINE L1 5346 5877 0 4 1179 186 103 0 0 chrX 77910015 77910044 -88740252 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1179 21 36 0 0 chrX 77910764 77910792 -88739504 + AT_rich Low_complexity Low_complexity 1 28 0 4 1179 234 0 0 0 chrX 77911977 77912003 -88738293 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1179 7523 107 9 2 chrX 77912029 77913231 -88737065 + L1_Mus4 LINE L1 5414 6633 -3 4 1179 513 287 150 23 chrX 77913446 77913706 -88736590 + MT2A LTR ERVL 218 510 -23 4 1179 295 210 0 24 chrX 77913716 77913799 -88736497 - L1M2 LINE L1 -848 5295 5215 4 1179 317 24 24 0 chrX 77913968 77914010 -88736286 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 4 1179 6696 68 36 2 chrX 77914524 77915413 -88734883 + L1Md_F2 LINE L1 5657 6575 -7 4 1179 240 291 38 45 chrX 77915570 77915703 -88734593 + Lx8 LINE L1 7332 7463 -10 4 1179 550 324 73 39 chrX 77915723 77916006 -88734290 + Lx8 LINE L1 7051 7330 -143 4 1179 504 86 0 0 chrX 77916006 77916076 -88734220 + (TA)n Simple_repeat Simple_repeat 1 70 0 4 1179 550 324 73 39 chrX 77916076 77916200 -88734096 + Lx8 LINE L1 7331 7472 -1 4 1179 25 0 0 0 chrX 77916414 77916439 -88733857 + AT_rich Low_complexity Low_complexity 1 25 0 4 1179 1691 316 29 11 chrX 77916586 77917284 -88733012 - Lx9 LINE L1 -171 7473 6764 4 1179 436 324 0 54 chrX 77917533 77917644 -88732652 - RSINE1 SINE B4 -36 129 25 4 1179 1172 55 0 0 chrX 77917860 77918005 -88732291 - B1_Mm SINE Alu -2 145 1 4 1179 242 182 0 0 chrX 77919044 77919088 -88731208 + ORR1D2 LTR MaLR 327 370 0 4 1179 21 71 0 0 chrX 77919529 77919571 -88730725 + AT_rich Low_complexity Low_complexity 1 42 0 4 1179 360 330 107 43 chrX 77919889 77920076 -88730220 + MLT1G3 LTR MaLR 200 398 -197 4 1179 1421 209 50 60 chrX 77920770 77920992 -88729304 - RMER10B LTR ERVL 0 398 192 4 1179 1313 45 6 0 chrX 77920992 77921169 -88729127 + (GA)n Simple_repeat Simple_repeat 1 178 0 4 1179 1421 209 50 60 chrX 77921169 77921348 -88728948 - RMER10B LTR ERVL -207 191 1 4 1179 1554 236 147 30 chrX 77921751 77922253 -88728043 - RMER2 LTR ERV1 -4 563 3 4 1179 1780 269 25 20 chrX 77922442 77922931 -88727365 - RLTR16 LTR ERVK -14 491 1 4 1179 940 314 25 59 chrX 77922986 77923308 -88726988 - MTE2b LTR MaLR -8 371 61 4 1179 214 348 11 62 chrX 77923803 77923910 -88726386 - L2c LINE L2 -78 3309 3213 4 1179 261 259 117 36 chrX 77924057 77924253 -88726043 + L1MC3 LINE L1 6358 6569 -1216 4 1179 1102 192 69 35 chrX 77924303 77924622 -88725674 - Lx7 LINE L1 -2 7694 7365 4 1179 2241 235 57 37 chrX 77924633 77925282 -88725014 + Lx7 LINE L1 6649 7310 -386 4 1179 496 311 0 26 chrX 77925318 77925473 -88724823 - B3 SINE B2 -7 209 59 4 1179 20090 82 6 2 chrX 77925508 77928962 -88721334 - L1Md_F2 LINE L1 -1 6581 3117 4 1179 3843 143 4 3 chrX 77928949 77929877 -88720419 - L1Md_F2 LINE L1 -4298 1585 243 4 1179 298 335 75 31 chrX 77930305 77930465 -88719831 + MTEa LTR MaLR 212 378 -1 4 1179 543 31 0 0 chrX 77930500 77930565 -88719731 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1179 268 300 57 7 chrX 77930570 77930711 -88719585 + L1MC3 LINE L1 6980 7127 -658 4 1179 253 291 171 14 chrX 77930718 77930934 -88719362 + L1MC3 LINE L1 7313 7562 -223 4 1179 8520 134 11 19 chrX 77930941 77932382 -88717914 + Lx3A LINE L1 5546 6970 -11 4 1179 233 57 0 28 chrX 77932384 77932420 -88717876 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 4 1179 25 0 0 0 chrX 77932421 77932446 -88717850 + AT_rich Low_complexity Low_complexity 1 25 0 4 1179 207 0 0 0 chrX 77932933 77932956 -88717340 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1179 237 151 0 0 chrX 77933623 77933676 -88716620 + T-rich Low_complexity Low_complexity 1 53 0 4 1179 575 337 78 48 chrX 77934706 77934750 -88715546 + RMER15 LTR ERVL 274 312 -263 4 1179 972 294 74 17 chrX 77934750 77935100 -88715196 - ORR1D2 LTR MaLR 0 370 1 4 1179 575 337 78 48 chrX 77935100 77935348 -88714948 + RMER15 LTR ERVL 313 575 0 4 1179 493 321 15 0 chrX 77937293 77937424 -88712872 + B3 SINE B2 80 212 -4 4 1179 666 143 8 45 chrX 77937961 77938093 -88712203 + Lx3B LINE L1 4467 4593 -1293 4 1179 26837 89 31 9 chrX 77938091 77940269 -88710027 - L1Md_F2 LINE L1 0 6582 4401 4 1179 3467 23 2 0 chrX 77940269 77940664 -88709632 + MTA_Mm LTR MaLR 1 396 0 4 1179 9116 36 1 2 chrX 77940664 77941763 -88708533 + MTA_Mm-int LTR MaLR 1 1098 0 4 1179 3434 25 2 0 chrX 77941763 77942158 -88708138 + MTA_Mm LTR MaLR 1 396 0 4 1179 26837 112 23 5 chrX 77942158 77946540 -88703756 - L1Md_F2 LINE L1 -1483 4400 98 4 1179 7280 126 8 6 chrX 77946546 77947699 -88702597 + Lx3B LINE L1 4587 5741 -145 4 1179 2660 194 40 11 chrX 77947701 77948244 -88702052 - RLTR31_Mm LTR ERVK -2 559 1 4 1179 3031 128 66 4 chrX 77948244 77948762 -88701534 + Lx3B LINE L1 5733 6282 -691 4 1179 3939 146 27 15 chrX 77948931 77949605 -88700691 + Lx3B LINE L1 6287 6968 -5 4 1179 192 40 0 0 chrX 77949764 77949789 -88700507 + (TTATA)n Simple_repeat Simple_repeat 3 27 0 4 1179 452 335 107 38 chrX 77949956 77950232 -88700064 + MER74A LTR ERVL 3 305 -317 4 1179 459 385 61 25 chrX 77950903 77951100 -88699196 + B4A SINE B4 17 220 -72 5 1179 336 358 42 31 chrX 77951237 77951430 -88698866 - Lx8 LINE L1 -351 7122 6928 5 1179 194 128 0 25 chrX 77951520 77951560 -88698736 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1179 360 0 0 0 chrX 77951579 77951619 -88698677 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 1179 28 61 0 0 chrX 77951624 77951673 -88698623 + AT_rich Low_complexity Low_complexity 1 49 0 5 1179 516 146 0 0 chrX 77951962 77952051 -88698245 + (GAAA)n Simple_repeat Simple_repeat 3 91 0 5 1179 3371 30 2 0 chrX 77953156 77953551 -88696745 - MTA_Mm LTR MaLR 0 396 1 5 1179 8953 33 6 1 chrX 77953551 77954643 -88695653 - MTA_Mm-int LTR MaLR 0 1098 1 5 1179 3305 33 5 0 chrX 77954645 77955037 -88695259 - MTA_Mm LTR MaLR -2 394 1 5 1179 278 301 61 9 chrX 77955098 77955212 -88695084 + MIR SINE MIR 47 166 -96 5 1179 1975 145 3 6 chrX 77955784 77956096 -88694200 + RLTR10E LTR ERVK 1 311 0 5 1179 22 0 0 0 chrX 77956207 77956229 -88694067 + AT_rich Low_complexity Low_complexity 1 22 0 5 1179 180 111 0 0 chrX 77956556 77956583 -88693713 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 5 1179 1162 55 12 6 chrX 77956927 77957091 -88693205 - L1Md_F2 LINE L1 -16 6566 6402 5 1179 4326 79 5 2 chrX 77957092 77957698 -88692598 - L1_Mm LINE L1 -3241 2642 2035 5 1179 489 34 0 0 chrX 77957698 77957757 -88692539 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 1179 7874 35 41 0 chrX 77957760 77958736 -88691560 - L1Md_F3 LINE L1 -14 6570 5555 5 1179 5782 88 1 0 chrX 77958736 77958809 -88691487 - L1Md_F LINE L1 -3833 2050 1978 5 1179 185 0 40 0 chrX 77958809 77958834 -88691462 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 1179 5782 138 57 34 chrX 77958834 77960559 -88689737 - L1Md_F LINE L1 -3906 1977 211 5 1179 903 67 0 0 chrX 77960888 77961007 -88689289 + (TTTC)n Simple_repeat Simple_repeat 3 121 0 5 1179 531 345 52 26 chrX 77961804 77962036 -88688260 - B4A SINE B4 -12 280 43 5 1179 22 56 0 0 chrX 77962036 77962072 -88688224 + AT_rich Low_complexity Low_complexity 1 36 0 5 1179 3695 143 24 45 chrX 77962482 77963235 -88687061 - RMER17A LTR ERVK -14 737 1 5 1179 4167 238 90 53 chrX 77964253 77965403 -88684893 - Lx6 LINE L1 0 7460 6269 5 1179 414 0 0 0 chrX 77965947 77965993 -88684303 + (TC)n Simple_repeat Simple_repeat 2 47 0 5 1179 252 0 0 0 chrX 77965993 77966020 -88684276 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1179 3861 37 4 0 chrX 77966959 77967451 -88682845 - L1Md_F3 LINE L1 0 6584 6118 5 1179 733 332 48 22 chrX 77967803 77968117 -88682179 + Charlie13a DNA Charlie 630 951 -563 5 1179 23 68 0 0 chrX 77968123 77968167 -88682129 + AT_rich Low_complexity Low_complexity 1 44 0 5 1179 25 0 0 0 chrX 77968404 77968429 -88681867 + AT_rich Low_complexity Low_complexity 1 25 0 5 1179 406 335 21 47 chrX 77968804 77969039 -88681257 + MLT1D LTR MaLR 6 234 -271 5 1179 466 80 0 33 chrX 77969244 77969335 -88680961 + Lx3A LINE L1 6889 6976 -5 5 1179 1283 246 14 4 chrX 77969735 77970013 -88680283 - RMER1B Other Other -231 835 555 5 1179 583 349 61 50 chrX 77970132 77970593 -88679703 + Lx8 LINE L1 7000 7465 -8 5 1179 21 0 0 0 chrX 77970593 77970614 -88679682 + AT_rich Low_complexity Low_complexity 1 21 0 5 1179 411 333 0 9 chrX 77970657 77970772 -88679524 + B1_Mur1 SINE Alu 34 147 -2 5 1179 531 82 0 0 chrX 77971316 77971389 -88678907 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 5 1179 420 20 0 0 chrX 77971528 77971577 -88678719 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1179 223 337 24 0 chrX 77971589 77971672 -88678624 - L2a LINE L2 -16 3410 3326 5 1179 1619 173 6 3 chrX 77972304 77972617 -88677679 + L1_Mur2 LINE L1 4985 5298 -579 5 1179 5797 164 19 21 chrX 77972614 77973510 -88676786 + Lx LINE L1 5626 6514 -140 5 1179 540 0 0 0 chrX 77973510 77973570 -88676726 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 1179 5797 164 19 21 chrX 77973570 77973698 -88676598 + Lx LINE L1 6515 6646 -8 5 1179 3467 121 4 4 chrX 77974644 77975175 -88675121 - Lx3_Mus LINE L1 -639 6370 5840 5 1179 4091 112 26 8 chrX 77975176 77975791 -88674505 + Lx3_Mus LINE L1 6376 7001 -8 5 1179 34 24 0 0 chrX 77975791 77975832 -88674464 + AT_rich Low_complexity Low_complexity 1 41 0 5 1179 252 86 0 0 chrX 77975843 77975878 -88674418 + (GGA)n Simple_repeat Simple_repeat 3 37 0 5 1179 23 33 0 0 chrX 77976406 77976436 -88673860 + AT_rich Low_complexity Low_complexity 1 30 0 5 1179 372 337 38 65 chrX 77976847 77977110 -88673186 + Lx8 LINE L1 6990 7245 -228 5 1179 666 130 0 0 chrX 77977192 77977300 -88672996 + (TG)n Simple_repeat Simple_repeat 2 109 0 5 1179 21 57 0 0 chrX 77977426 77977461 -88672835 + AT_rich Low_complexity Low_complexity 1 35 0 5 1179 310 344 85 73 chrX 77977589 77977918 -88672378 - MLT1B LTR MaLR -52 338 6 5 1179 366 23 0 0 chrX 77978010 77978053 -88672243 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 1179 417 39 0 0 chrX 77978053 77978103 -88672193 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1179 3107 106 0 0 chrX 77978108 77978543 -88671753 + Lx2 LINE L1 5591 6025 -972 5 1179 2263 86 3 3 chrX 77978543 77978858 -88671438 + MTA_Mm LTR MaLR 82 396 0 5 1179 469 132 12 0 chrX 77978858 77978941 -88671355 + Lx2 LINE L1 6566 6649 -5 5 1179 485 233 196 30 chrX 77979295 77979342 -88670954 + RMER1C Other Other 1145 1191 -151 5 1179 288 0 0 0 chrX 77979342 77979374 -88670922 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 5 1179 485 233 196 30 chrX 77979374 77979494 -88670802 + RMER1C Other Other 1192 1340 -2 5 1179 314 200 28 14 chrX 77979596 77979667 -88670629 - Lx2B LINE L1 -403 6597 6526 5 1179 661 216 92 12 chrX 77981318 77981482 -88668814 + B2_Mm2 SINE B2 1 177 -18 5 1179 324 0 0 0 chrX 77981482 77981518 -88668778 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1179 216 97 0 0 chrX 77981517 77981548 -88668748 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 1179 306 301 143 20 chrX 77981600 77981657 -88668639 + L1MC LINE L1 3302 3372 -2774 5 1179 288 0 0 0 chrX 77981657 77981689 -88668607 + (TA)n Simple_repeat Simple_repeat 1 32 0 5 1179 306 301 143 20 chrX 77981689 77981834 -88668462 + L1MC LINE L1 3373 3528 -2618 5 1179 389 208 7 74 chrX 77982231 77982366 -88667930 + Lx9 LINE L1 7486 7611 -33 5 1179 20910 60 0 0 chrX 77982373 77985051 -88665245 + L1Md_T LINE L1 2908 5586 -297 5 1179 7984 56 0 0 chrX 77985051 77986045 -88664251 + L1Md_T LINE L1 5587 6580 -2 5 1179 1153 44 0 0 chrX 77986046 77986183 -88664113 + L1Md_F2 LINE L1 5450 5586 -297 5 1179 7973 52 2 0 chrX 77986183 77987165 -88663131 + L1Md_F2 LINE L1 5587 6570 -12 5 1179 232 299 53 23 chrX 77987179 77987350 -88662946 + L1MC LINE L1 3595 3770 -2376 5 1179 838 301 39 121 chrX 77987377 77987766 -88662530 + MTE2a LTR MaLR 20 376 -3 5 1180 486 333 45 25 chrX 77987928 77988085 -88662211 + B4A SINE B4 3 162 -130 5 1180 728 176 7 39 chrX 77988135 77988289 -88662007 + URR1A DNA MER1_type 78 226 0 5 1180 273 29 0 0 chrX 77988336 77988370 -88661926 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1180 420 200 0 0 chrX 77988370 77988510 -88661786 + GA-rich Low_complexity Low_complexity 1 140 0 5 1180 2627 51 11 20 chrX 77988510 77988867 -88661429 + L1Md_F3 LINE L1 6230 6583 -1 5 1180 304 241 23 0 chrX 77988875 77988962 -88661334 + GA-rich Low_complexity Low_complexity 2 90 0 5 1180 189 0 0 0 chrX 77988978 77988999 -88661297 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1180 830 206 0 0 chrX 77989003 77989144 -88661152 - B1_Mur4 SINE Alu 0 150 10 5 1180 4988 23 0 0 chrX 77989187 77989762 -88660534 + L1Md_A LINE L1 6008 6582 0 5 1180 739 218 0 7 chrX 77989822 77989970 -88660326 + B1_Mur4 SINE Alu 2 148 -2 5 1180 1286 233 100 29 chrX 77990099 77990440 -88659856 + ORR1C2 LTR MaLR 1 365 -19 5 1180 189 0 0 0 chrX 77990442 77990463 -88659833 + (TC)n Simple_repeat Simple_repeat 1 21 0 5 1180 207 0 0 0 chrX 77990463 77990486 -88659810 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1180 348 24 0 0 chrX 77990486 77990527 -88659769 + (CCA)n Simple_repeat Simple_repeat 1 41 0 5 1180 4244 222 37 29 chrX 77990531 77991782 -88658514 + L1_Mur2 LINE L1 1087 2366 -3514 5 1180 1872 226 14 7 chrX 77991814 77992232 -88658064 - MTC LTR MaLR 0 421 1 5 1180 665 333 0 6 chrX 77993967 77994142 -88656154 - ORR1D2 LTR MaLR -196 174 1 5 1180 27 29 0 0 chrX 77994148 77994182 -88656114 + AT_rich Low_complexity Low_complexity 1 34 0 5 1180 36394 42 12 14 chrX 77994186 77995839 -88654457 - L1Md_T LINE L1 0 6582 4914 5 1180 234 167 46 77 chrX 77995839 77995904 -88654392 + RMER20A LTR ERVK 186 248 -268 5 1180 36394 42 12 14 chrX 77995904 77999576 -88650720 - L1Md_T LINE L1 0 4913 1203 5 1180 3790 24 0 0 chrX 77999542 78000000 -88650296 - L1Md_Gf LINE L1 -5380 1142 685 5 1180 4441 106 1 24 chrX 78000000 78000799 -88649497 - L1Md_Gf LINE L1 -5838 684 3 1 1180 344 257 8 74 chrX 78000835 78000957 -88649339 + ORR1D2 LTR MaLR 245 358 -21 2 1180 4155 270 84 38 chrX 78000972 78002271 -88648025 + ORR1D2-int LTR MaLR 9 1367 -3 2 1180 684 324 84 8 chrX 78002274 78002535 -88647761 + ORR1D2 LTR MaLR 1 281 -89 2 1180 1116 208 7 101 chrX 78002554 78002832 -88647464 - Lx4A LINE L1 0 7058 6807 3 1180 2938 148 58 7 chrX 78002830 78003394 -88646902 - L1_Mur2 LINE L1 -1294 4583 3991 4 1180 5666 149 29 100 chrX 78003391 78004710 -88645586 - L1_Mur2 LINE L1 -2579 3298 2074 4 1180 216 111 0 0 chrX 78004710 78004746 -88645550 + (TTG)n Simple_repeat Simple_repeat 1 36 0 5 1180 5666 149 29 100 chrX 78004746 78004770 -88645526 - L1_Mur2 LINE L1 -3804 2073 2050 4 1180 417 250 46 20 chrX 78004770 78004897 -88645399 + ORR1D2 LTR MaLR 264 407 -14 2 1180 234 43 85 0 chrX 78004983 78005030 -88645266 + (TTTTTA)n Simple_repeat Simple_repeat 4 54 0 6 1180 4361 156 7 66 chrX 78005049 78005887 -88644409 - Lx2 LINE L1 -131 6866 6078 7 1180 414 129 0 0 chrX 78005874 78005936 -88644360 + L1_Mur1 LINE L1 4696 4757 -1129 8 1180 22 0 0 0 chrX 78006244 78006266 -88644030 + AT_rich Low_complexity Low_complexity 1 22 0 9 1180 482 327 28 47 chrX 78006325 78006540 -88643756 - Lx8 LINE L1 -90 7383 7173 1 1180 913 314 101 17 chrX 78006553 78007036 -88643260 - Lx8 LINE L1 -377 7096 6573 1 1180 2252 234 28 34 chrX 78007629 78008181 -88642115 + L1VL4 LINE L1 194 752 -5550 1 1180 820 123 0 27 chrX 78008181 78008331 -88641965 - L1Md_F2 LINE L1 0 6582 6437 1 1180 2252 234 28 34 chrX 78008331 78008359 -88641937 + L1VL4 LINE L1 753 770 -5532 1 1180 3640 222 13 26 chrX 78008367 78009422 -88640874 + L1VL4 LINE L1 11 1049 -2510 1 1180 36283 15 14 19 chrX 78009418 78013907 -88636389 + L1Md_A LINE L1 413 4927 -956 1 1180 225 183 46 77 chrX 78013907 78013972 -88636324 - RMER20A LTR ERVK -268 248 186 1 1180 36283 15 14 19 chrX 78013972 78014626 -88635670 + L1Md_A LINE L1 4928 5586 -297 1 1180 8700 15 3 0 chrX 78014626 78015619 -88634677 + L1Md_A LINE L1 5587 6582 0 1 1180 5675 127 17 29 chrX 78015623 78016663 -88633633 + L1VL4 LINE L1 1031 2058 -1501 1 1180 4803 112 6 10 chrX 78016663 78017387 -88632909 + Lx3_Mus LINE L1 5870 6590 -419 1 1180 8007 44 3 3 chrX 78017396 78018377 -88631919 + L1Md_F2 LINE L1 5588 6568 -14 1 1180 453 36 0 0 chrX 78018435 78018490 -88631806 + (GAAA)n Simple_repeat Simple_repeat 4 58 0 1 1180 2204 171 5 7 chrX 78018490 78018909 -88631387 + L1_Mur2 LINE L1 3841 4258 -1619 2 1180 475 185 0 61 chrX 78018910 78019008 -88631288 - RLTR26 LTR ERVK -537 105 14 2 1180 1960 148 12 0 chrX 78019032 78019369 -88630927 - L1_Mm LINE L1 -1406 4477 4137 2 1180 1875 80 14 25 chrX 78019369 78019652 -88630644 + Lx3_Mus LINE L1 6730 7009 0 2 1180 26 30 0 0 chrX 78019716 78019749 -88630547 + AT_rich Low_complexity Low_complexity 1 33 0 2 1180 1090 135 244 39 chrX 78020034 78020423 -88629873 + RLTR31B_Mm LTR ERVK 3 471 -86 2 1180 3861 62 2 0 chrX 78020668 78021154 -88629142 - L1Md_F2 LINE L1 -12 6570 6084 2 1180 441 351 38 38 chrX 78021338 78021384 -88628912 - MER58A DNA MER1_type 0 224 179 2 1180 4021 99 32 2 chrX 78021384 78021969 -88628327 + Lx3_Mus LINE L1 6407 7009 0 2 1180 441 351 38 38 chrX 78021969 78022135 -88628161 - MER58A DNA MER1_type -46 178 12 2 1180 369 310 20 0 chrX 78022581 78022681 -88627615 + PB1D7 SINE Alu 13 114 -6 2 1180 1242 303 35 32 chrX 78022695 78023067 -88627229 - MTE2b LTR MaLR 0 379 7 3 1180 743 281 25 8 chrX 78023065 78023302 -88626994 + MER2 DNA MER2_type 91 331 -14 3 1180 485 228 0 0 chrX 78025065 78025157 -88625139 - Lx6 LINE L1 -803 6657 6566 3 1180 2460 240 76 63 chrX 78025156 78025462 -88624834 - Lx7 LINE L1 -1228 6468 6171 3 1180 338 74 0 18 chrX 78025462 78025517 -88624779 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 1180 10298 202 96 14 chrX 78025517 78028437 -88621859 - Lx7 LINE L1 -1526 6170 2994 3 1180 4444 89 7 11 chrX 78028431 78028450 -88621846 - L1_Mus2 LINE L1 -14 6552 6532 3 1180 2155 99 3 3 chrX 78028450 78028753 -88621543 - L1_Mus2 LINE L1 -1 6565 6263 3 1180 4444 89 7 11 chrX 78028753 78029349 -88620947 - L1_Mus2 LINE L1 -35 6531 5940 3 1180 586 154 77 0 chrX 78029371 78029488 -88620808 - Lx7 LINE L1 -2881 2999 2874 3 1180 1829 248 32 6 chrX 78029523 78029990 -88620306 - Lx7 LINE L1 -7186 542 64 3 1180 1063 303 28 12 chrX 78030613 78031321 -88618975 - Lx5 LINE L1 -574 6886 6132 3 1180 234 158 53 0 chrX 78031971 78032028 -88618268 - Lx2 LINE L1 0 6997 6938 3 1180 615 236 109 4 chrX 78032290 78032520 -88617776 + L1_Mur3 LINE L1 3094 3347 -2533 3 1180 666 111 0 0 chrX 78032505 78032604 -88617692 - L1_Mur1 LINE L1 -351 5535 5437 4 1180 7176 107 13 4 chrX 78032603 78033704 -88616592 + L1_Mus3 LINE L1 5529 6638 0 4 1180 1146 336 61 40 chrX 78033756 78034376 -88615920 + Lx7 LINE L1 6116 6748 -948 4 1180 615 223 0 0 chrX 78034416 78034537 -88615759 + RMER1C Other Other 1053 1173 -169 4 1180 2981 70 0 10 chrX 78034874 78035276 -88615020 - L1Md_F2 LINE L1 0 6582 6185 4 1180 1161 75 0 0 chrX 78035311 78035458 -88614838 + B1_Mm SINE Alu 1 147 0 4 1180 21 57 0 0 chrX 78035647 78035682 -88614614 + AT_rich Low_complexity Low_complexity 1 35 0 4 1180 778 234 93 11 chrX 78036113 78036275 -88614021 - Lx9 LINE L1 -41 7603 7419 4 1180 443 75 30 0 chrX 78036275 78036342 -88613954 + (TATG)n Simple_repeat Simple_repeat 4 72 0 4 1180 778 234 93 11 chrX 78036342 78036447 -88613849 - Lx9 LINE L1 -226 7418 7314 4 1180 2553 240 38 74 chrX 78036446 78037392 -88612904 - L1_Rod LINE L1 -174 5673 4762 4 1180 678 150 0 0 chrX 78037438 78037558 -88612738 + (GAAA)n Simple_repeat Simple_repeat 3 122 0 5 1180 371 284 17 0 chrX 78037558 78037674 -88612622 + L1_Mur3 LINE L1 4658 4775 -1105 3 1180 360 0 0 0 chrX 78037796 78037836 -88612460 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 1180 5114 172 83 29 chrX 78039070 78039267 -88611029 - RLTR25A LTR ERVK -1 1102 921 5 1180 653 0 13 0 chrX 78039267 78039344 -88610952 + (TC)n Simple_repeat Simple_repeat 2 79 0 5 1180 306 0 0 0 chrX 78039344 78039377 -88610919 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1180 5114 172 83 29 chrX 78039377 78039738 -88610558 - RLTR25A LTR ERVK -183 920 514 5 1180 330 26 0 0 chrX 78039738 78039777 -88610519 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 5 1180 5114 172 83 29 chrX 78039777 78040261 -88610035 - RLTR25A LTR ERVK -590 513 3 5 1180 2161 114 50 135 chrX 78040267 78040786 -88609510 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1180 249 354 72 27 chrX 78041247 78041468 -88608828 + L1MA4 LINE L1 5698 5928 -372 5 1180 237 358 24 24 chrX 78041704 78041830 -88608466 + Lx8 LINE L1 7085 7210 -263 5 1180 887 304 8 38 chrX 78041958 78042273 -88608023 + Lx6 LINE L1 6946 7209 -251 5 1180 295 226 72 48 chrX 78042496 78042658 -88607638 + L1M2 LINE L1 5076 5239 -904 6 1180 315 0 0 0 chrX 78042866 78042901 -88607395 + (TAA)n Simple_repeat Simple_repeat 1 35 0 6 1180 671 176 14 14 chrX 78042909 78043066 -88607230 + Lx7 LINE L1 5752 5911 -1785 6 1180 31 26 0 0 chrX 78043100 78043138 -88607158 + AT_rich Low_complexity Low_complexity 1 38 0 6 1180 1582 286 71 43 chrX 78043143 78043818 -88606478 + Lx9 LINE L1 6801 7494 -150 6 1180 527 302 103 10 chrX 78043858 78044247 -88606049 + L1M2 LINE L1 5486 5921 -379 6 1180 21 57 0 0 chrX 78044354 78044389 -88605907 + AT_rich Low_complexity Low_complexity 1 35 0 6 1180 829 19 19 0 chrX 78047043 78047150 -88603146 + (TG)n Simple_repeat Simple_repeat 1 109 0 6 1180 379 331 35 75 chrX 78048965 78049164 -88601132 - B3A SINE B2 0 198 8 6 1180 23 68 0 0 chrX 78049245 78049289 -88601007 + AT_rich Low_complexity Low_complexity 1 44 0 6 1180 872 266 8 101 chrX 78049299 78049655 -88600641 + RLTR11B LTR ERVK 1 323 -130 6 1180 279 322 21 11 chrX 78049667 78049761 -88600535 + RLTR11B LTR ERVK 284 378 -75 6 1180 22 0 0 0 chrX 78050019 78050041 -88600255 + AT_rich Low_complexity Low_complexity 1 22 0 7 1180 809 320 65 17 chrX 78050379 78050732 -88599564 - ORR1D2 LTR MaLR 0 370 1 7 1180 1314 309 113 117 chrX 78050736 78051593 -88598703 - ORR1D2-int LTR MaLR -4 1366 513 7 1180 976 69 84 0 chrX 78051792 78051923 -88598373 - B1_Mus2 SINE Alu -5 142 1 7 1180 257 282 12 12 chrX 78051933 78052019 -88598277 + Lx8 LINE L1 7051 7136 -337 7 1180 320 298 103 75 chrX 78052013 78052227 -88598069 + Lx8 LINE L1 7246 7465 -8 7 1180 22 35 0 0 chrX 78053230 78053259 -88597037 + AT_rich Low_complexity Low_complexity 1 29 0 7 1180 33 43 0 0 chrX 78054065 78054112 -88596184 + AT_rich Low_complexity Low_complexity 1 47 0 7 1180 24 53 0 0 chrX 78054175 78054213 -88596083 + AT_rich Low_complexity Low_complexity 1 38 0 7 1180 2874 105 5 18 chrX 78054229 78054666 -88595630 + L1_Mus3 LINE L1 6206 6636 -2 7 1180 716 305 98 52 chrX 78055448 78056499 -88593797 - L1_Mur3 LINE L1 -528 5769 4630 7 1180 21 0 0 0 chrX 78056556 78056577 -88593719 + AT_rich Low_complexity Low_complexity 1 21 0 7 1180 696 324 27 12 chrX 78056605 78056864 -88593432 - Lx8 LINE L1 -950 6523 6261 8 1180 254 93 0 74 chrX 78056882 78056936 -88593360 + A-rich Low_complexity Low_complexity 4 54 0 8 1180 979 130 0 14 chrX 78056936 78057084 -88593212 + B1_Mus2 SINE Alu 1 146 -1 8 1180 254 93 0 74 chrX 78057084 78057110 -88593186 + A-rich Low_complexity Low_complexity 55 78 0 8 1180 480 18 0 0 chrX 78057178 78057235 -88593061 + (TG)n Simple_repeat Simple_repeat 1 57 0 8 1180 769 302 49 27 chrX 78057249 78057617 -88592679 - Lx8 LINE L1 -1289 6184 5809 8 1180 29 0 0 0 chrX 78057794 78057823 -88592473 + AT_rich Low_complexity Low_complexity 1 29 0 8 1180 22 56 0 0 chrX 78058578 78058614 -88591682 + AT_rich Low_complexity Low_complexity 1 36 0 8 1180 360 0 0 0 chrX 78058660 78058700 -88591596 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 8 1180 1099 50 0 54 chrX 78058702 78058850 -88591446 - B1_Mm SINE Alu -6 141 2 8 1180 271 273 34 12 chrX 78060052 78060155 -88590141 + Lx6 LINE L1 7358 7434 -26 8 1180 259 250 60 0 chrX 78060923 78061023 -88589273 + L1MD LINE L1 5587 5692 -2303 9 1180 38363 5 0 0 chrX 78061043 78066577 -88583719 + L1Md_A LINE L1 53 5586 -297 9 1180 9026 2 0 0 chrX 78066577 78067573 -88582723 + L1Md_A LINE L1 5587 6582 0 9 1180 412 297 28 11 chrX 78067585 78067762 -88582534 + L1MC1 LINE L1 5713 5892 -441 9 1180 448 307 55 0 chrX 78067765 78067892 -88582404 + ID_B1 SINE B4 91 224 0 9 1180 536 308 21 41 chrX 78067904 78068195 -88582101 + L1M2 LINE L1 2476 2760 -3383 9 1180 768 314 19 4 chrX 78068462 78068727 -88581569 + Lx7 LINE L1 7069 7337 -359 9 1180 35831 93 9 23 chrX 78068768 78075858 -88574438 - L1Md_F2 LINE L1 -4 7456 507 9 1180 3111 232 73 29 chrX 78075859 78076950 -88573346 - Lx6 LINE L1 -937 6523 5410 9 1180 2219 207 28 9 chrX 78076990 78077536 -88572760 - Lx6 LINE L1 -1362 4518 3963 9 1180 2827 191 66 7 chrX 78077556 78078145 -88572151 - Lx LINE L1 -4 6650 6027 9 1180 1536 211 27 113 chrX 78078147 78078670 -88571626 - Lx6 LINE L1 -1930 3950 3473 9 1180 211 122 0 58 chrX 78078670 78078722 -88571574 + (TTTG)n Simple_repeat Simple_repeat 3 51 0 9 1180 780 306 106 12 chrX 78078733 78079325 -88570971 + L1M2 LINE L1 4400 5047 -1096 1 1180 6788 122 26 5 chrX 78079526 78081025 -88569271 - L1_Mus3 LINE L1 -2 6636 5100 1 1180 17116 124 24 16 chrX 78081035 78082598 -88567698 - L1Md_F2 LINE L1 -3 6579 4864 1 1180 3007 122 43 0 chrX 78082598 78083081 -88567215 + L1_Mus3 LINE L1 6132 6635 -3 1 1180 17116 169 53 39 chrX 78083081 78083471 -88566825 - L1Md_F2 LINE L1 -1020 4863 4514 1 1180 1312 231 25 6 chrX 78083471 78083785 -88566511 + RLTR46 LTR ERVK 1 320 0 1 1180 17116 169 53 39 chrX 78083785 78086180 -88564116 - L1Md_F2 LINE L1 -1370 4513 2175 1 1180 1369 91 0 19 chrX 78086178 78086436 -88563860 - MusHAL1 LINE L1 -2498 855 603 1 1180 5264 94 1 0 chrX 78086441 78087145 -88563151 - Lx3_Mus LINE L1 0 7009 6305 1 1180 1740 90 0 0 chrX 78087145 78087378 -88562918 + Lx3_Mus LINE L1 5590 5822 -1187 1 1180 553 73 0 0 chrX 78087403 78087485 -88562811 - L1_Mus2 LINE L1 -2 6564 6483 1 1180 4338 166 18 47 chrX 78087487 78088345 -88561951 - L1VL1 LINE L1 -5526 896 64 1 1180 2535 122 45 100 chrX 78088354 78088576 -88561720 - Lx3_Mus LINE L1 -89 6920 6724 1 1180 2969 53 3 5 chrX 78088576 78088954 -88561342 + L1Md_F2 LINE L1 6205 6581 -1 1 1180 2535 122 45 100 chrX 78088954 78089243 -88561053 - Lx3_Mus LINE L1 -286 6723 6437 1 1180 2806 216 37 61 chrX 78089237 78089958 -88560338 + Lx3C LINE L1 6271 6974 -2 1 1180 26 0 0 0 chrX 78089962 78089988 -88560308 + AT_rich Low_complexity Low_complexity 1 26 0 1 1180 216 0 0 0 chrX 78090188 78090212 -88560084 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 1180 1562 243 76 15 chrX 78090310 78090769 -88559527 - Lx9 LINE L1 -10 7634 7148 1 1180 542 284 63 19 chrX 78090956 78091161 -88559135 + B3 SINE B2 3 216 0 1 1180 660 177 28 7 chrX 78091182 78091324 -88558972 + Lx2B LINE L1 6856 7000 0 1 1180 22 0 0 0 chrX 78091554 78091576 -88558720 + AT_rich Low_complexity Low_complexity 1 22 0 1 1180 594 75 0 0 chrX 78091696 78091776 -88558520 + (CATATA)n Simple_repeat Simple_repeat 4 83 0 1 1180 452 48 16 0 chrX 78092834 78092897 -88557399 + (TTTG)n Simple_repeat Simple_repeat 1 64 0 1 1180 1063 75 0 0 chrX 78092897 78093030 -88557266 - B1_Mm SINE Alu -13 134 2 1 1180 297 375 29 22 chrX 78093042 78093181 -88557115 - B1F1 SINE Alu -9 140 1 1 1180 1012 109 0 7 chrX 78093410 78093546 -88556750 + B1_Mus1 SINE Alu 1 136 -12 1 1180 675 0 0 0 chrX 78093546 78093621 -88556675 + (CAAAA)n Simple_repeat Simple_repeat 3 77 0 1 1180 7696 52 26 2 chrX 78093696 78094668 -88555628 - L1Md_F2 LINE L1 0 6582 5588 1 1180 383 291 104 31 chrX 78094736 78094899 -88555397 + MER3 DNA MER1_type 35 209 0 1 1180 441 262 0 18 chrX 78097089 78097198 -88553098 - B1_Mur2 SINE Alu -5 144 38 1 1180 1811 120 19 44 chrX 78097444 78097759 -88552537 - IAPLTR2b LTR ERVK -20 307 1 1 1180 450 53 0 0 chrX 78097761 78097818 -88552478 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1180 266 204 0 0 chrX 78097831 78097875 -88552421 - RSINE1 SINE B4 -108 57 14 1 1180 334 279 0 0 chrX 78098291 78098359 -88551937 - ID4_ SINE ID -4 79 12 1 1180 299 305 55 10 chrX 78098962 78099072 -88551224 - PB1D10 SINE Alu -23 104 1 1 1180 1634 268 68 9 chrX 78099249 78099690 -88550606 + Lx6 LINE L1 6963 7429 -31 1 1180 3414 149 21 2 chrX 78099710 78100282 -88550014 - Lx3A LINE L1 -8 6973 6391 1 1180 194 370 33 40 chrX 78101090 78101242 -88549054 - L2 LINE L2 -654 2765 2615 1 1180 183 280 118 13 chrX 78101304 78101380 -88548916 + L3 LINE CR1 723 806 -3683 1 1180 3247 70 9 2 chrX 78101518 78101950 -88548346 - L1_Mus3 LINE L1 -8 6630 6196 1 1180 185 351 133 25 chrX 78102398 78102556 -88547740 - MER5B DNA MER1_type -3 175 1 1 1180 26 30 0 0 chrX 78102752 78102785 -88547511 + AT_rich Low_complexity Low_complexity 1 33 0 1 1180 212 356 11 11 chrX 78103174 78103262 -88547034 + L2c LINE L2 3291 3378 -9 1 1180 242 333 83 50 chrX 78104061 78104181 -88546115 - ID_B1 SINE B4 -92 132 9 1 1180 5840 1 1 0 chrX 78104294 78104943 -88545353 + L1Md_A LINE L1 5933 6582 0 1 1180 821 296 164 19 chrX 78105569 78105886 -88544410 - MTEa LTR MaLR -3 376 14 1 1180 512 192 154 0 chrX 78106183 78106313 -88543983 + L1VL2 LINE L1 504 653 -5682 1 1180 30304 87 6 4 chrX 78106312 78109387 -88540909 + L1Md_F3 LINE L1 439 3477 -2406 1 1180 6958 64 2 0 chrX 78109387 78110279 -88540017 + L1Md_T LINE L1 5689 6582 0 1 1180 30304 62 3 4 chrX 78110279 78111401 -88538895 + L1Md_F3 LINE L1 3478 4599 -1284 1 1180 5249 43 0 0 chrX 78111401 78112035 -88538261 + L1Md_T LINE L1 5949 6582 0 1 1180 13329 62 1 1 chrX 78112035 78113022 -88537274 + L1Md_F3 LINE L1 4600 5586 -297 1 1180 8097 45 0 3 chrX 78113023 78114023 -88536273 + L1Md_F3 LINE L1 5588 6584 0 1 1180 6809 185 61 3 chrX 78114023 78115735 -88534561 + L1VL4 LINE L1 942 2760 -3126 1 1180 481 191 34 0 chrX 78115737 78115826 -88534470 - ORR1C1 LTR MaLR -281 97 6 1 1180 543 348 9 9 chrX 78115872 78116095 -88534201 - Lx9 LINE L1 -888 6756 6534 1 1180 350 231 0 133 chrX 78116099 78116204 -88534092 + ORR1C1 LTR MaLR 104 194 -190 1 1180 237 98 0 0 chrX 78116204 78116245 -88534051 + (TC)n Simple_repeat Simple_repeat 1 41 0 1 1180 991 221 5 28 chrX 78116245 78116459 -88533837 + ORR1C1 LTR MaLR 166 374 -4 1 1180 1408 222 188 14 chrX 78117188 78117545 -88532751 + MTC LTR MaLR 1 419 -2 1 1180 286 127 0 0 chrX 78117705 78117768 -88532528 + L1_Mus4 LINE L1 6574 6636 0 1 1180 966 179 113 32 chrX 78117876 78118124 -88532172 - RLTR13C2 LTR ERVK 0 808 541 1 147 3811 322 43 35 chrX 78118176 78120706 -88529590 - MMTV-int LTR ERVK -3596 3657 1109 1 1181 948 166 16 22 chrX 78121175 78121360 -88528936 - MMTV-int LTR ERVK -5622 186 3 1 1181 3753 173 45 134 chrX 78121367 78122349 -88527947 - RLTR13D6 LTR ERVK -8 894 1 1 1181 270 0 0 0 chrX 78122521 78122551 -88527745 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1181 245 308 51 19 chrX 78122755 78122970 -88527326 + L1_Mur3 LINE L1 4239 4460 -1420 1 1181 238 268 56 28 chrX 78123152 78123294 -88527002 + L1_Mur3 LINE L1 5247 5392 -488 1 1181 1638 309 132 25 chrX 78123438 78124717 -88525579 - Lx8 LINE L1 -1559 5914 4501 1 1181 1233 333 87 62 chrX 78124911 78126081 -88524215 + Lx8 LINE L1 6272 7470 -3 1 1181 275 322 55 39 chrX 78126098 78126482 -88523814 + L1M2 LINE L1 3523 3912 -2231 1 1181 22 35 0 0 chrX 78126525 78126554 -88523742 + AT_rich Low_complexity Low_complexity 1 29 0 1 1181 354 167 45 0 chrX 78128042 78128108 -88522188 + B1F1 SINE Alu 73 141 -8 1 1181 5210 59 5 0 chrX 78128144 78128809 -88521487 + L1Md_F2 LINE L1 5915 6582 0 1 1181 252 350 65 24 chrX 78129019 78129142 -88521154 + LTR33A_ LTR ERVL 289 416 -115 1 1181 233 371 112 114 chrX 78129287 78129761 -88520535 - LTR33 LTR ERVL -30 485 13 1 1181 518 287 9 9 chrX 78129857 78129973 -88520323 + B3A SINE B2 9 124 -74 1 1181 255 250 92 9 chrX 78130128 78130237 -88520059 + MER95 LTR ERV 173 290 -141 1 1181 29 28 0 0 chrX 78130284 78130320 -88519976 + AT_rich Low_complexity Low_complexity 1 36 0 1 1181 1052 253 79 36 chrX 78130552 78130945 -88519351 - RMER17C LTR ERVK 0 410 1 1 1181 1532 192 0 16 chrX 78131119 78131431 -88518865 - Lx2 LINE L1 0 6997 6691 1 1181 309 22 0 21 chrX 78131432 78131479 -88518817 + Lx LINE L1 6306 6351 -303 1 1181 495 214 188 0 chrX 78131996 78132113 -88518183 + B1_Mur4 SINE Alu 2 140 -10 1 1181 396 0 0 0 chrX 78132506 78132550 -88517746 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1181 1023 193 68 15 chrX 78132628 78132833 -88517463 + ORR1B2 LTR MaLR 143 358 -9 1 1181 880 329 27 24 chrX 78132905 78133316 -88516980 + Lx8 LINE L1 6353 6764 -709 1 1181 2382 87 113 8 chrX 78133374 78133746 -88516550 + RLTR9F LTR ERVK 1 411 -4 1 1181 1036 247 55 53 chrX 78133749 78134129 -88516167 + ETnERV3-int LTR ERVK 3 383 -2931 1 1181 486 0 0 0 chrX 78134132 78134186 -88516110 + (TAAAA)n Simple_repeat Simple_repeat 4 57 0 1 1181 2939 199 120 81 chrX 78134189 78135192 -88515104 + ETnERV3-int LTR ERVK 1216 2257 -3551 1 1181 35410 35 0 0 chrX 78135194 78140621 -88509675 + L1Md_T LINE L1 66 5589 -297 1 1181 8973 6 0 0 chrX 78140621 78141617 -88508679 + L1Md_T LINE L1 5590 6585 0 1 1181 709 135 0 0 chrX 78141627 78141738 -88508558 + ETnERV2-int LTR ERVK 2134 2244 -5162 1 1181 2223 132 24 16 chrX 78141729 78142107 -88508189 + ETnERV2-int LTR ERVK 2494 2874 -4532 1 1181 480 236 0 70 chrX 78142110 78142224 -88508072 - MT2A LTR ERVL -427 106 1 1 1181 1273 298 82 37 chrX 78142248 78142843 -88507453 - Lx9 LINE L1 -275 7369 6748 1 1181 2443 189 92 52 chrX 78142862 78143622 -88506674 + RLTR13D6 LTR ERVK 1 803 0 1 1181 757 279 37 8 chrX 78143642 78143888 -88506408 - RLTR20A2 LTR ERVK -107 471 219 1 1181 766 351 83 16 chrX 78143888 78144311 -88505985 - Lx9 LINE L1 -885 6759 6309 1 1181 1344 256 26 33 chrX 78144488 78144916 -88505380 - L1_Rod LINE L1 -714 5133 4709 1 1181 306 303 71 32 chrX 78144937 78145063 -88505233 + MLT1E1A LTR MaLR 486 655 -25 1 1181 243 125 0 0 chrX 78145488 78145528 -88504768 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1181 21 71 0 0 chrX 78145616 78145658 -88504638 + AT_rich Low_complexity Low_complexity 1 42 0 1 1181 2583 106 5 3 chrX 78145746 78146125 -88504171 + L1_Mus3 LINE L1 6252 6631 -7 1 1181 25 95 0 0 chrX 78146221 78146295 -88504001 + AT_rich Low_complexity Low_complexity 1 74 0 1 1181 180 152 0 0 chrX 78147282 78147315 -88502981 + A-rich Low_complexity Low_complexity 2 34 0 1 1181 180 77 0 0 chrX 78147577 78147603 -88502693 + (TTTAG)n Simple_repeat Simple_repeat 4 29 0 1 1181 1064 88 0 7 chrX 78147719 78147867 -88502429 + B1_Mus1 SINE Alu 2 148 0 1 1181 525 131 0 0 chrX 78147867 78147951 -88502345 + (GA)n Simple_repeat Simple_repeat 2 85 0 1 1181 965 105 0 39 chrX 78147951 78148130 -88502166 + (GAAAA)n Simple_repeat Simple_repeat 3 174 0 1 1181 312 257 9 90 chrX 78148581 78148692 -88501604 + PB1D10 SINE Alu 1 102 -15 1 1181 23 33 0 0 chrX 78149056 78149086 -88501210 + AT_rich Low_complexity Low_complexity 1 30 0 1 1181 1239 201 98 7 chrX 78149162 78149458 -88500838 + RLTR11A LTR ERVK 1 323 -205 1 1181 2548 206 41 16 chrX 78149458 78150115 -88500181 - L1_Mur2 LINE L1 -1235 4905 4234 1 1181 689 312 55 38 chrX 78150497 78150950 -88499346 + Lx7 LINE L1 5998 6458 -1015 2 1181 940 319 92 34 chrX 78150964 78151674 -88498622 + Lx7 LINE L1 6517 7269 -427 2 1181 42 48 0 0 chrX 78151833 78151896 -88498400 + AT_rich Low_complexity Low_complexity 1 63 0 2 1181 210 71 0 0 chrX 78152518 78152546 -88497750 + (TAAAA)n Simple_repeat Simple_repeat 5 32 0 2 1181 259 217 0 0 chrX 78152552 78152612 -88497684 - MLT1A1 LTR MaLR -22 352 293 2 1181 2527 113 41 10 chrX 78152667 78153059 -88497237 - Lx3_Mus LINE L1 -5 7004 6601 2 1181 272 319 57 46 chrX 78153059 78153208 -88497088 - MLT1A1 LTR MaLR -69 321 153 2 1181 18950 179 25 8 chrX 78153225 78153746 -88496550 - L1VL2 LINE L1 -709 5174 4650 2 1181 2924 32 3 11 chrX 78153746 78154095 -88496201 + ORR1A0 LTR MaLR 1 346 0 2 1181 13886 59 3 2 chrX 78154095 78155885 -88494411 + ORR1A0-int LTR MaLR 1 1792 0 2 1181 2994 26 3 0 chrX 78155885 78156230 -88494066 + ORR1A0 LTR MaLR 1 346 0 2 1181 18950 179 25 8 chrX 78156230 78156459 -88493837 - L1VL2 LINE L1 -1234 4649 4434 2 1181 4294 19 0 0 chrX 78156459 78156941 -88493355 + LTRIS_Mm LTR ERV1 1 482 0 2 1181 18950 175 25 9 chrX 78156941 78160214 -88490082 - L1VL2 LINE L1 -1450 4433 1081 2 1181 1907 108 313 0 chrX 78160214 78160546 -88489750 + RLTR10C LTR ERVK 1 436 0 2 1181 4066 132 16 27 chrX 78160546 78160983 -88489313 - L1VL2 LINE L1 -5554 1080 652 2 1181 335 345 8 18 chrX 78160983 78161126 -88489170 - MLT1A1 LTR MaLR -199 166 27 2 1181 471 35 0 0 chrX 78161133 78161190 -88489106 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 2 1181 22 35 0 0 chrX 78162333 78162362 -88487934 + AT_rich Low_complexity Low_complexity 1 29 0 2 1181 280 314 0 65 chrX 78162552 78162644 -88487652 + B1F SINE Alu 19 104 -45 2 1181 266 342 25 12 chrX 78163194 78163274 -88487022 - ID4 SINE ID -1 82 2 2 1181 249 358 70 42 chrX 78163276 78163419 -88486877 - B1_Mus2 SINE Alu 0 147 1 2 1181 683 264 51 58 chrX 78163424 78163737 -88486559 + Lx9 LINE L1 7333 7643 -1 2 1181 214 138 0 33 chrX 78164203 78164263 -88486033 + (CAGAGA)n Simple_repeat Simple_repeat 2 59 0 2 1181 31 58 0 0 chrX 78165168 78165220 -88485076 + AT_rich Low_complexity Low_complexity 1 52 0 2 1181 421 323 14 81 chrX 78165348 78165557 -88484739 - B3A SINE B2 -3 195 1 2 1181 294 36 54 18 chrX 78166079 78166135 -88484161 + (CAAA)n Simple_repeat Simple_repeat 1 58 0 2 1181 3242 214 73 50 chrX 78167464 78168321 -88481975 - Lx4B LINE L1 -7 7051 6175 2 1181 8432 118 20 16 chrX 78168342 78169406 -88480890 - L1_Mus3 LINE L1 -2 6636 5569 2 1181 338 0 24 0 chrX 78169406 78169448 -88480848 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 1181 8432 140 23 3 chrX 78169448 78170553 -88479743 - L1_Mus3 LINE L1 -315 5568 4436 2 1181 5771 126 9 14 chrX 78170556 78171542 -88478754 - MusHAL1 LINE L1 -1158 1554 574 2 1181 4351 148 8 4 chrX 78171527 78172245 -88478051 - L1VL2 LINE L1 -5316 1019 299 2 1181 337 335 57 21 chrX 78172263 78172503 -88477793 + Lx2B LINE L1 4966 5241 -902 2 1181 2201 112 45 55 chrX 78172516 78172895 -88477401 - L1Md_F2 LINE L1 -12 6570 6196 2 1181 6257 34 5 1 chrX 78172892 78173650 -88476646 - L1Md_F3 LINE L1 -11 6573 5813 2 1181 1071 301 19 39 chrX 78173798 78174298 -88475998 - Lx8 LINE L1 -1518 5955 5451 2 1181 308 337 20 0 chrX 78174331 78174432 -88475864 + Lx8 LINE L1 6918 7020 -453 2 1181 329 32 39 78 chrX 78174466 78174568 -88475728 + (CAAA)n Simple_repeat Simple_repeat 2 99 0 2 1181 317 263 122 10 chrX 78174651 78174749 -88475547 + Lx2B LINE L1 5667 5779 -1221 2 1181 2171 331 33 30 chrX 78175071 78176124 -88474172 + Lx8 LINE L1 6067 7122 -351 2 1181 22 35 0 0 chrX 78178126 78178155 -88472141 + AT_rich Low_complexity Low_complexity 1 29 0 2 1181 180 0 0 0 chrX 78178494 78178514 -88471782 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 2 1181 1023 73 0 0 chrX 78178837 78178974 -88471322 + (GA)n Simple_repeat Simple_repeat 2 138 0 2 1181 273 341 68 0 chrX 78179880 78179968 -88470328 - B3 SINE B2 -33 183 90 2 1181 403 270 22 0 chrX 78180311 78180400 -88469896 - B3A SINE B2 -107 91 1 2 1181 279 0 0 0 chrX 78183555 78183586 -88466710 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1181 7308 164 54 13 chrX 78183719 78185097 -88465199 + Lx2 LINE L1 5587 6997 0 2 1181 22 0 0 0 chrX 78185097 78185119 -88465177 + AT_rich Low_complexity Low_complexity 1 22 0 2 1181 5865 58 25 0 chrX 78185164 78185908 -88464388 + L1Md_F2 LINE L1 5820 6582 0 2 1181 1692 53 0 0 chrX 78186051 78186258 -88464038 + L1_Mus4 LINE L1 6011 6217 -419 2 1181 429 20 0 0 chrX 78187778 78187828 -88462468 + (TC)n Simple_repeat Simple_repeat 2 51 0 2 1181 225 65 0 0 chrX 78187831 78187862 -88462434 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1181 33 25 0 0 chrX 78187921 78187961 -88462335 + AT_rich Low_complexity Low_complexity 1 40 0 2 1181 259 198 73 28 chrX 78188051 78188160 -88462136 - Lx8 LINE L1 -2 7471 7358 2 1181 3905 115 5 3 chrX 78188232 78188808 -88461488 - L1_Mus3 LINE L1 -6 6632 6056 2 1181 21 57 0 0 chrX 78189634 78189669 -88460627 + AT_rich Low_complexity Low_complexity 1 35 0 2 1181 180 77 0 0 chrX 78190894 78190920 -88459376 + (TTATA)n Simple_repeat Simple_repeat 4 29 0 2 1181 21 0 0 0 chrX 78191973 78191994 -88458302 + AT_rich Low_complexity Low_complexity 1 21 0 2 1181 589 399 56 15 chrX 78192235 78192573 -88457723 - LTR89 LTR ERVL? -171 708 357 2 1181 2032 40 8 0 chrX 78193111 78193359 -88456937 - L1Md_T LINE L1 -2 6580 6331 2 1181 4923 104 66 4 chrX 78193447 78194217 -88456079 - Lx3_Mus LINE L1 0 7009 6192 2 1181 180 0 0 0 chrX 78194318 78194338 -88455958 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 1181 1197 236 77 7 chrX 78194347 78194633 -88455663 - Lx7 LINE L1 -290 7406 7101 2 1181 2633 154 23 35 chrX 78194637 78195068 -88455228 - RMER17A2 LTR ERVK -11 895 377 2 1181 727 51 25 17 chrX 78195068 78195187 -88455109 + (GA)n Simple_repeat Simple_repeat 1 120 0 2 1181 2633 214 42 32 chrX 78195187 78195451 -88454845 - RMER17A2 LTR ERVK -443 463 90 2 1181 1945 281 29 35 chrX 78195452 78195969 -88454327 - Lx6 LINE L1 -34 7426 6913 2 1181 1260 293 55 36 chrX 78195980 78196451 -88453845 - Lx6 LINE L1 -1068 6392 5913 2 1181 1371 219 115 7 chrX 78196467 78196771 -88453525 - Lx5 LINE L1 -3 7047 6711 2 1181 2498 202 148 99 chrX 78196777 78197552 -88452744 - RLTR25B LTR ERVK -4 1024 212 2 1181 8617 186 6 61 chrX 78197552 78198037 -88452259 - L1_Mur2 LINE L1 -624 5253 4871 2 1181 8467 31 0 0 chrX 78198037 78199032 -88451264 + L1Md_T LINE L1 5588 6582 0 2 1181 8617 186 6 61 chrX 78199032 78200443 -88449853 - L1_Mur2 LINE L1 -1007 4870 3461 2 1181 20695 96 58 1 chrX 78200440 78204439 -88445857 - L1Md_F2 LINE L1 -12 6570 2321 2 1181 39146 75 8 23 chrX 78204439 78212164 -88438132 - L1Md_T LINE L1 0 6582 99 2 1181 932 181 59 5 chrX 78212189 78212411 -88437885 - L1_Mur2 LINE L1 -520 5357 5124 2 1181 793 292 74 27 chrX 78212422 78212679 -88437617 - MTE2b LTR MaLR -53 326 58 2 1181 225 280 0 0 chrX 78212680 78212730 -88437566 - MTE2b LTR MaLR -282 97 48 2 1181 22 0 0 0 chrX 78213035 78213057 -88437239 + AT_rich Low_complexity Low_complexity 1 22 0 2 1181 612 222 159 21 chrX 78213500 78213689 -88436607 + B3 SINE B2 2 216 0 2 1181 322 240 48 32 chrX 78214332 78214457 -88435839 - Lx9 LINE L1 -164 7480 7354 2 1181 2697 15 63 21 chrX 78215282 78215614 -88434682 + ORR1A0 LTR MaLR 1 346 0 2 1181 1446 332 70 89 chrX 78215615 78216699 -88433597 + RMER1C Other Other 86 1148 -194 2 1181 6473 61 19 0 chrX 78216674 78217508 -88432788 + L1Md_F2 LINE L1 4737 5586 -297 2 1181 7702 56 12 3 chrX 78217508 78218495 -88431801 + L1Md_F2 LINE L1 5587 6582 0 2 1181 575 195 219 22 chrX 78218495 78218673 -88431623 + RMER1C Other Other 1130 1342 0 2 1181 23 68 0 0 chrX 78219045 78219089 -88431207 + AT_rich Low_complexity Low_complexity 1 44 0 2 1181 396 0 0 0 chrX 78220271 78220315 -88429981 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1181 5881 209 32 107 chrX 78220393 78222945 -88427351 + L1_Mur2 LINE L1 888 3292 -2594 2 1181 973 294 24 36 chrX 78222937 78223395 -88426901 + L1MA4 LINE L1 5351 5825 -475 2 1181 8072 35 5 27 chrX 78223395 78224783 -88425513 + L1Md_A LINE L1 302 1654 -4229 2 1181 2547 47 2 224 chrX 78224783 78225279 -88425017 + RLTR10 LTR ERVK 1 386 -4 2 1181 16707 29 1 1 chrX 78225295 78227241 -88423055 + RLTR10-int LTR ERVK 41 1986 -1 2 1181 2550 47 2 224 chrX 78227241 78227737 -88422559 + RLTR10 LTR ERVK 1 386 -4 2 1181 32307 16 16 16 chrX 78227743 78230962 -88419334 + L1Md_A LINE L1 1649 4943 -3052 2 1181 229 169 47 78 chrX 78230962 78231026 -88419270 - RMER20A LTR ERVK -268 248 187 2 1181 32307 16 16 16 chrX 78231026 78231681 -88418615 + L1Md_A LINE L1 4944 5615 -2380 2 1181 7970 37 24 0 chrX 78231681 78232654 -88417642 + L1Md_A LINE L1 5587 6582 0 2 1181 1341 269 25 23 chrX 78232654 78232754 -88417542 + L1Md_A LINE L1 5616 5665 -2330 2 1181 714 55 0 0 chrX 78232779 78232870 -88417426 + (TA)n Simple_repeat Simple_repeat 2 92 0 2 1181 259 372 35 28 chrX 78233130 78233271 -88417025 + MTEb LTR MaLR 1 142 -237 2 1181 306 0 0 0 chrX 78233271 78233305 -88416991 + (GGA)n Simple_repeat Simple_repeat 3 36 0 2 1181 291 259 164 0 chrX 78233328 78233444 -88416852 + MTEb LTR MaLR 228 362 -17 2 1181 275 154 91 15 chrX 78233566 78233632 -88416664 + Lx5 LINE L1 6977 7047 -3 2 1181 2108 55 4 4 chrX 78233797 78234069 -88416227 + L1Md_F2 LINE L1 6308 6579 -3 2 1181 207 0 0 0 chrX 78234199 78234222 -88416074 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2 1181 268 268 74 59 chrX 78234269 78234380 -88415916 + MER104 DNA Tc2 3 115 -66 2 1181 384 297 0 0 chrX 78234380 78234471 -88415825 + ORR1D1 LTR MaLR 1 91 -283 2 1181 1679 215 25 13 chrX 78234482 78234878 -88415418 - Lx5 LINE L1 -879 6171 5771 2 1181 3326 236 69 20 chrX 78234863 78235671 -88414625 + Lx5 LINE L1 6194 7041 -9 2 1181 720 261 189 16 chrX 78235693 78235942 -88414354 + ORR1D1 LTR MaLR 78 369 -5 2 1181 318 285 185 45 chrX 78235940 78236205 -88414091 + Kanga1 DNA Tc2 130 431 -1314 2 1181 1921 129 27 61 chrX 78236225 78236555 -88413741 + ORR1A2 LTR MaLR 1 319 -8 2 1181 564 138 8 17 chrX 78237198 78237316 -88412980 + (TA)n Simple_repeat Simple_repeat 1 117 0 2 1181 249 386 46 52 chrX 78238084 78238237 -88412059 + MIRc SINE MIR 3 154 -114 2 1181 482 226 115 6 chrX 78239147 78239303 -88410993 + L1M3 LINE L1 5381 5553 -615 2 1181 299 336 59 68 chrX 78240744 78240862 -88409434 + PB1 SINE Alu 11 127 0 2 1181 801 210 47 74 chrX 78241345 78241602 -88408694 - Lx6 LINE L1 -1449 6011 5762 2 1181 953 159 33 108 chrX 78241599 78241811 -88408485 + L1_Mur3 LINE L1 5459 5654 -226 2 1181 1276 112 262 0 chrX 78242077 78242375 -88407921 - L1_Mur2 LINE L1 -2524 1016 640 2 1181 2754 49 47 0 chrX 78242375 78242740 -88407556 - MTA_Mm LTR MaLR 0 396 15 2 1181 1158 192 37 27 chrX 78242741 78243052 -88407244 - L1_Mur2 LINE L1 -6292 420 4 2 1181 1341 298 52 20 chrX 78243055 78243849 -88406447 - L1_Mur3 LINE L1 -1007 5136 4318 2 1181 3046 145 30 10 chrX 78243874 78244382 -88405914 + Lx3_Mus LINE L1 6447 6964 -45 2 1181 699 75 0 0 chrX 78244393 78244487 -88405809 + (GA)n Simple_repeat Simple_repeat 1 94 0 3 1181 21 36 0 0 chrX 78244528 78244556 -88405740 + AT_rich Low_complexity Low_complexity 1 28 0 3 1181 363 221 0 0 chrX 78244746 78244832 -88405464 + (TATG)n Simple_repeat Simple_repeat 2 87 0 3 1181 328 242 192 0 chrX 78244858 78244995 -88405301 - L1_Mur3 LINE L1 -2285 3858 3668 2 1181 462 174 22 0 chrX 78244995 78245087 -88405209 + ORR1C1 LTR MaLR 1 94 -284 3 1181 230 214 0 0 chrX 78245087 78245129 -88405167 - Lx4B LINE L1 -1122 5936 5895 3 1181 4799 214 40 8 chrX 78245125 78246188 -88404108 + Lx4B LINE L1 5936 7031 -27 3 1181 180 125 0 0 chrX 78246196 78246228 -88404068 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 3 1181 1226 236 82 4 chrX 78246237 78246505 -88403791 + ORR1C1 LTR MaLR 80 368 -10 3 1181 297 270 66 0 chrX 78246511 78246618 -88403678 - L1_Mur3 LINE L1 -2209 3671 3557 2 1181 878 203 94 9 chrX 78246807 78247040 -88403256 + Lx4B LINE L1 6802 7054 -4 3 1181 395 292 27 14 chrX 78247047 78247331 -88402965 + L1MA4 LINE L1 5037 5325 -818 3 1181 4749 162 11 14 chrX 78247386 78248230 -88402066 - Lx2 LINE L1 0 6997 6157 3 1181 3912 164 14 42 chrX 78248235 78249067 -88401229 + RMER17D2 LTR ERVK 1 809 0 3 1181 3044 136 71 5 chrX 78249070 78249672 -88400624 - Lx2 LINE L1 -857 6151 5507 3 147 287 324 56 83 chrX 78249811 78249987 -88400309 + MTE2a LTR MaLR 17 175 -246 3 1182 5035 32 2 2 chrX 78249987 78250581 -88399715 + L1Md_F2 LINE L1 5981 6574 -8 3 1182 287 301 50 128 chrX 78250581 78250610 -88399686 + MTE2a LTR MaLR 163 187 -192 3 1182 243 282 47 0 chrX 78250619 78250704 -88399592 + L1MA4 LINE L1 5844 5932 -368 3 1182 495 344 47 41 chrX 78250726 78251217 -88399079 - L1_Rod LINE L1 -3052 2795 2302 3 1182 297 0 0 0 chrX 78251270 78251303 -88398993 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1182 449 136 37 0 chrX 78252148 78252229 -88398067 - URR1B DNA MER1_type 0 225 142 3 1182 1403 144 4 0 chrX 78252232 78252461 -88397835 - Lx2A1 LINE L1 -5 7003 6774 3 1182 1845 158 13 10 chrX 78252463 78252769 -88397527 - RLTR27 LTR ERVK -2 307 1 3 1182 3081 236 15 27 chrX 78252769 78253846 -88396450 - L1_Mur3 LINE L1 -3892 1988 934 2 1182 227 196 0 0 chrX 78253850 78253896 -88396400 + MTD LTR MaLR 366 411 -8 3 1182 227 154 0 0 chrX 78253865 78253904 -88396392 + MTC LTR MaLR 383 421 0 3 1182 426 332 54 62 chrX 78253905 78254342 -88395954 - MLT1C LTR MaLR 0 467 53 3 1182 1033 229 102 21 chrX 78254573 78254898 -88395398 - BGLII_B LTR ERVK -60 381 31 3 1182 390 242 42 84 chrX 78254911 78255078 -88395218 - MYSERV-int LTR ERVK -2 6548 6389 3 1182 1248 82 36 0 chrX 78255082 78255276 -88395020 - L1_Mus3 LINE L1 0 6638 6438 3 1182 1701 239 11 6 chrX 78255378 78255735 -88394561 - ORR1B2 LTR MaLR -8 359 1 3 1182 189 74 0 0 chrX 78255837 78255864 -88394432 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1182 6193 153 23 12 chrX 78256478 78258334 -88391962 - Lx LINE L1 -12 6642 4774 3 1182 6622 105 27 23 chrX 78258343 78259467 -88390829 - MusHAL1 LINE L1 -319 2393 1266 3 1182 243 377 0 54 chrX 78259635 78259673 -88390623 + ID SINE ID 49 80 -144 3 1182 278 363 28 47 chrX 78259673 78259780 -88390516 + PB1D10 SINE Alu 1 105 -12 3 1182 249 33 0 0 chrX 78259781 78259811 -88390485 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 3 1182 503 246 16 77 chrX 78259874 78259925 -88390371 + L1M2 LINE L1 5624 5668 -623 3 1182 4016 115 2 3 chrX 78259925 78260509 -88389787 - MT2B2 LTR ERVL -1 583 1 3 1182 503 246 16 77 chrX 78260509 78260651 -88389645 + L1M2 LINE L1 5669 5805 -486 3 1182 452 358 59 5 chrX 78260798 78261020 -88389276 - Lx7 LINE L1 -449 7247 7014 3 1182 239 336 103 57 chrX 78261346 78261646 -88388650 + Tigger5 DNA MER2_type 578 891 -1515 3 1182 364 219 28 28 chrX 78262345 78262453 -88387843 - Lx6 LINE L1 -6 7454 7347 3 1182 2723 281 88 31 chrX 78262450 78263356 -88386940 - Lx6 LINE L1 -332 7128 6171 3 1182 401 53 0 0 chrX 78263382 78263439 -88386857 - L1Md_F2 LINE L1 -12 6570 6514 3 1182 857 74 0 0 chrX 78263439 78263547 -88386749 + L1Md_F2 LINE L1 6120 6227 -355 3 1182 15189 208 55 85 chrX 78263556 78267010 -88383286 - Lx6 LINE L1 -1293 6167 2612 3 1182 1916 142 14 0 chrX 78267010 78267306 -88382990 + ORR1A2 LTR MaLR 1 300 -27 3 1182 15189 208 55 85 chrX 78267306 78268447 -88381849 - Lx6 LINE L1 -1293 2611 1436 3 1182 189 0 0 0 chrX 78268447 78268468 -88381828 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 3 1182 15189 206 57 89 chrX 78268468 78268549 -88381747 - Lx6 LINE L1 -4445 1435 1343 3 1182 203 138 0 0 chrX 78268550 78268579 -88381717 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 3 1182 6507 183 56 26 chrX 78268579 78270946 -88379350 - Lx4B LINE L1 0 7058 4587 3 1182 1902 135 90 55 chrX 78270954 78271355 -88378941 + RLTR9F LTR ERVK 1 415 0 3 1182 667 262 62 69 chrX 78271357 78271677 -88378619 + ETnERV2-int LTR ERVK 3 320 -2994 3 1182 513 0 0 0 chrX 78271677 78271734 -88378562 + (TAAAA)n Simple_repeat Simple_repeat 4 60 0 3 1182 9380 172 35 38 chrX 78271734 78275561 -88374735 + ETnERV2-int LTR ERVK 726 6422 -984 3 1182 392 139 27 14 chrX 78275774 78275847 -88374449 + ETnERV2-int LTR ERVK 7331 7404 -2 3 1182 1972 142 94 13 chrX 78275848 78276232 -88374064 + RLTR9F LTR ERVK 1 415 0 3 1182 9436 150 239 31 chrX 78276235 78276530 -88373766 - Lx4B LINE L1 -1296 4581 4267 3 1182 185 0 0 39 chrX 78276530 78276556 -88373740 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 3 1182 9436 164 104 25 chrX 78276556 78279499 -88370797 - Lx4B LINE L1 -1611 4266 737 3 1182 2049 251 16 71 chrX 78279493 78279935 -88370361 - L1_Mur3 LINE L1 -4513 1367 964 3 1182 261 0 0 0 chrX 78279935 78279964 -88370332 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1182 2049 291 64 42 chrX 78279964 78280608 -88369688 - L1_Mur3 LINE L1 -6700 1028 372 3 1182 7272 48 1 0 chrX 78280610 78281719 -88368577 - L1Md_F2 LINE L1 -107 6475 5366 3 1182 7684 52 3 2 chrX 78281705 78282675 -88367621 + L1Md_F2 LINE L1 4400 5370 -513 3 1182 232 286 22 0 chrX 78283043 78283134 -88367162 + L1MA8 LINE L1 6145 6237 -54 3 1182 468 326 68 31 chrX 78283715 78283874 -88366422 - Lx7 LINE L1 -1530 6166 6007 3 1182 4642 99 7 13 chrX 78283874 78284546 -88365750 - L1_Mus2 LINE L1 0 6566 5899 3 1182 468 326 68 31 chrX 78284546 78284769 -88365527 - Lx7 LINE L1 -1690 6006 5770 3 1182 393 298 23 0 chrX 78284822 78284953 -88365343 + Lx8 LINE L1 6281 6414 -1059 3 1182 18041 164 23 3 chrX 78284954 78289175 -88361121 + Lx LINE L1 2343 6651 -3 3 1182 410 290 8 0 chrX 78289237 78289369 -88360927 + Lx8 LINE L1 6890 7021 -675 3 1182 290 257 256 28 chrX 78289387 78289563 -88360733 + Lx8 LINE L1 7230 7445 -28 3 1182 224 318 0 31 chrX 78289660 78289725 -88360571 + PB1D10 SINE Alu 29 91 -26 3 1182 575 314 31 4 chrX 78289753 78290012 -88360284 - L1M3 LINE L1 -1179 4961 4696 3 1182 1002 209 83 18 chrX 78291026 78291170 -88359126 - RLTR14 LTR ERV1 -3 379 238 3 1182 207 0 0 0 chrX 78291170 78291193 -88359103 + (GA)n Simple_repeat Simple_repeat 2 24 0 3 1182 1002 209 83 18 chrX 78291193 78291277 -88359019 - RLTR14 LTR ERV1 -145 237 136 3 1182 21 0 0 0 chrX 78292127 78292148 -88358148 + AT_rich Low_complexity Low_complexity 1 21 0 3 1182 351 0 0 0 chrX 78292598 78292637 -88357659 + (TTA)n Simple_repeat Simple_repeat 1 39 0 3 1182 3253 44 7 5 chrX 78292637 78293045 -88357251 - L1Md_F3 LINE L1 -26 6558 6150 3 1182 844 187 13 0 chrX 78293045 78293195 -88357101 - RLTR14 LTR ERV1 -224 158 7 3 1182 224 261 130 0 chrX 78293300 78293369 -88356927 + L2 LINE L2 2757 2834 -585 3 1182 929 128 7 0 chrX 78293748 78293889 -88356407 - B1_Mus1 SINE Alu -6 142 1 3 1182 8429 63 5 5 chrX 78293982 78295466 -88354830 - L1Md_F2 LINE L1 -315 6267 4786 3 1182 2742 39 0 211 chrX 78295497 78295989 -88354307 + RLTR10 LTR ERVK 1 388 -2 3 1182 294 111 0 85 chrX 78295993 78296052 -88354244 + RLTR10-int LTR ERVK 3 56 -1931 3 1182 7706 44 36 2 chrX 78296053 78297007 -88353289 + RLTR10-int LTR ERVK 13 998 -989 3 1182 343 240 62 39 chrX 78297071 78297201 -88353095 + RLTR10-int LTR ERVK 1462 1594 -5987 3 1182 8762 21 1 0 chrX 78297283 78298279 -88352017 + RLTR10-int LTR ERVK 990 1986 -1 3 1182 2761 39 0 211 chrX 78298279 78298773 -88351523 + RLTR10 LTR ERVK 1 390 0 3 1182 294 381 12 72 chrX 78298804 78298971 -88351325 + LTR16E2 LTR ERVL 198 354 -214 3 1182 1233 252 152 11 chrX 78299122 78299483 -88350813 + MTC LTR MaLR 2 413 -8 3 1182 262 224 150 20 chrX 78299484 78299584 -88350712 + L1M5 LINE L1 5607 5719 -521 3 1182 207 0 0 0 chrX 78299594 78299617 -88350679 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 1182 1148 68 7 0 chrX 78299623 78299769 -88350527 + B1_Mus2 SINE Alu 1 147 0 3 1182 1509 284 13 16 chrX 78299840 78300219 -88350077 + MTE2b LTR MaLR 2 379 0 3 1182 14360 176 29 18 chrX 78301133 78302502 -88347794 + L1_Mur2 LINE L1 634 2049 -3828 3 1182 324 0 0 0 chrX 78302502 78302538 -88347758 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1182 429 20 0 0 chrX 78302538 78302587 -88347709 + (GA)n Simple_repeat Simple_repeat 2 51 0 3 1182 14360 150 22 25 chrX 78302587 78304618 -88345678 + L1_Mur2 LINE L1 2050 4043 -1834 3 1182 1883 194 11 19 chrX 78304611 78304978 -88345318 + Lx4B LINE L1 6659 7022 -36 3 1182 336 164 0 0 chrX 78304996 78305057 -88345239 + Lx9 LINE L1 7572 7632 -12 3 1182 1421 351 50 17 chrX 78305616 78306315 -88343981 - Lx8 LINE L1 -387 7086 6365 3 1182 431 342 0 0 chrX 78306299 78306445 -88343851 + Lx8 LINE L1 6851 6996 -477 3 1182 6446 87 5 4 chrX 78306437 78307369 -88342927 + L1_Mur1 LINE L1 3771 4703 -1183 3 1182 538 345 48 96 chrX 78308379 78308629 -88341667 + 7SK RNA RNA 1 238 -93 3 1182 377 318 158 24 chrX 78308876 78309093 -88341203 - MIRb SINE MIR -2 260 18 3 1182 588 140 0 0 chrX 78309637 78309744 -88340552 + (CA)n Simple_repeat Simple_repeat 2 108 0 3 1182 327 65 0 0 chrX 78309928 78309974 -88340322 + (TTAG)n Simple_repeat Simple_repeat 3 48 0 3 1182 716 303 9 5 chrX 78309974 78310186 -88340110 - ID_B1 SINE B4 -10 214 2 3 1182 25 0 0 0 chrX 78311132 78311157 -88339139 + AT_rich Low_complexity Low_complexity 1 25 0 3 1182 1701 229 97 5 chrX 78312040 78312413 -88337883 - MTD LTR MaLR -8 411 5 3 1182 385 261 50 123 chrX 78312748 78313049 -88337247 + RMER10A LTR ERVL 122 400 -42 3 1182 29 28 0 0 chrX 78313554 78313590 -88336706 + AT_rich Low_complexity Low_complexity 1 36 0 3 1182 681 154 103 20 chrX 78314200 78314306 -88335990 - Lx2 LINE L1 -8 6989 6886 3 1182 186 43 0 0 chrX 78314306 78314329 -88335967 + (CCCA)n Simple_repeat Simple_repeat 3 25 0 3 1182 681 154 103 20 chrX 78314329 78314368 -88335928 - Lx2 LINE L1 -112 6885 6833 3 1182 1154 54 0 7 chrX 78315292 78315441 -88334855 - B1_Mus1 SINE Alu 0 148 1 3 1182 21 0 0 0 chrX 78316010 78316031 -88334265 + GC_rich Low_complexity Low_complexity 1 21 0 3 1182 450 0 0 0 chrX 78317030 78317080 -88333216 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1182 186 43 0 0 chrX 78317555 78317578 -88332718 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1182 489 92 0 0 chrX 78317595 78317671 -88332625 + (CA)n Simple_repeat Simple_repeat 2 77 0 3 1182 324 0 0 0 chrX 78317788 78317824 -88332472 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1182 208 143 0 0 chrX 78318441 78318476 -88331820 + (A)n Simple_repeat Simple_repeat 1 35 0 3 1182 359 365 203 25 chrX 78321542 78321975 -88328321 - MLT1G LTR MaLR -35 556 47 3 1182 615 203 55 0 chrX 78323477 78323605 -88326691 - B1_Mur3 SINE Alu -6 143 9 3 1182 294 79 0 0 chrX 78323610 78323648 -88326648 + (TCTCC)n Simple_repeat Simple_repeat 1 38 0 3 1182 851 105 35 17 chrX 78323648 78323822 -88326474 + CT-rich Low_complexity Low_complexity 3 179 0 3 1182 435 63 0 0 chrX 78327206 78327269 -88323027 + (TG)n Simple_repeat Simple_repeat 1 63 0 3 1182 407 257 29 0 chrX 78327290 78327395 -88322901 - RSINE1 SINE B4 -55 110 3 4 1182 401 304 126 36 chrX 78327395 78327557 -88322739 + MER58A DNA MER1_type 42 218 -6 4 1182 313 286 36 3 chrX 78329153 78329287 -88321009 + L1ME3 LINE L1 5991 6136 -28 4 1182 254 51 51 0 chrX 78329588 78329627 -88320669 + (TTTTC)n Simple_repeat Simple_repeat 1 41 0 4 1182 280 263 0 17 chrX 78330009 78330067 -88320229 + ID4_ SINE ID 2 58 -25 4 1182 189 94 0 0 chrX 78330124 78330156 -88320140 + (A)n Simple_repeat Simple_repeat 1 32 0 4 1182 23 0 0 0 chrX 78330219 78330242 -88320054 + AT_rich Low_complexity Low_complexity 1 23 0 4 1182 21 0 0 0 chrX 78330308 78330329 -88319967 + AT_rich Low_complexity Low_complexity 1 21 0 4 1182 24 0 0 0 chrX 78330344 78330368 -88319928 + AT_rich Low_complexity Low_complexity 1 24 0 4 1182 215 217 83 0 chrX 78331010 78331067 -88319229 - MIRc SINE MIR -157 111 48 4 1182 207 0 0 0 chrX 78332707 78332730 -88317566 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1182 1146 159 113 65 chrX 78333193 78333503 -88316793 - Lx4B LINE L1 -4 7054 6730 4 1182 274 149 45 0 chrX 78333606 78333673 -88316623 + A-rich Low_complexity Low_complexity 4 73 0 4 1182 1086 102 48 6 chrX 78334746 78334913 -88315383 - B2_Mm2 SINE B2 -21 174 1 4 1182 315 0 0 0 chrX 78334964 78334999 -88315297 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 4 1182 582 417 54 42 chrX 78335281 78335761 -88314535 - LTR16C LTR ERVL -2 487 2 4 1182 242 300 98 24 chrX 78335889 78335971 -88314325 + ID_B1 SINE B4 79 166 -58 4 1182 216 0 0 0 chrX 78336156 78336180 -88314116 + (GA)n Simple_repeat Simple_repeat 2 25 0 4 1182 573 15 0 0 chrX 78336180 78336246 -88314050 + (GAAAA)n Simple_repeat Simple_repeat 5 70 0 4 1182 216 313 58 48 chrX 78336827 78336931 -88313365 + L2 LINE L2 2802 2906 -513 4 1182 279 283 48 48 chrX 78337289 78337393 -88312903 - PB1D10 SINE Alu -1 116 13 4 1182 285 29 0 0 chrX 78338310 78338344 -88311952 + (TC)n Simple_repeat Simple_repeat 2 35 0 4 1182 21 0 0 0 chrX 78338498 78338519 -88311777 + AT_rich Low_complexity Low_complexity 1 21 0 4 1182 236 203 184 26 chrX 78338551 78338627 -88311669 - MER58B DNA MER1_type -62 279 192 4 1182 446 89 22 22 chrX 78339984 78340076 -88310220 + (CA)n Simple_repeat Simple_repeat 2 93 0 4 1182 321 26 0 0 chrX 78343021 78343059 -88307237 + (TTTTC)n Simple_repeat Simple_repeat 1 38 0 4 1182 22 0 0 0 chrX 78343290 78343312 -88306984 + AT_rich Low_complexity Low_complexity 1 22 0 4 1182 221 0 35 0 chrX 78343493 78343522 -88306774 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1182 213 301 110 0 chrX 78343525 78343598 -88306698 - ID4_ SINE ID -2 81 1 4 1182 571 139 30 0 chrX 78343628 78343729 -88306567 + Lx3B LINE L1 6869 6972 -1 4 1182 41 0 0 0 chrX 78343730 78343771 -88306525 + AT_rich Low_complexity Low_complexity 1 41 0 4 1182 3766 22 0 5 chrX 78345185 78345631 -88304665 + L1Md_F2 LINE L1 6137 6580 -2 4 1182 306 73 0 0 chrX 78345911 78345952 -88304344 + (CGTG)n Simple_repeat Simple_repeat 1 41 0 4 1182 522 31 0 0 chrX 78345953 78346017 -88304279 + (GA)n Simple_repeat Simple_repeat 1 64 0 4 1182 2660 170 20 22 chrX 78346771 78347277 -88303019 - Lx2 LINE L1 -1 6996 6492 4 1182 21 0 0 0 chrX 78348853 78348874 -88301422 + AT_rich Low_complexity Low_complexity 1 21 0 4 1182 1145 275 63 49 chrX 78350949 78351503 -88298793 + Lx8 LINE L1 5612 6173 -1300 4 1182 1906 204 54 25 chrX 78351522 78351965 -88298331 - RMER13B LTR ERVK 0 908 453 4 1182 530 252 18 0 chrX 78351955 78352066 -88298230 - RMER13B LTR ERVK -795 113 1 4 1182 3107 282 73 54 chrX 78352066 78353307 -88296989 + Lx8 LINE L1 6207 7471 -2 4 1182 187 79 0 50 chrX 78353309 78353349 -88296947 + (CAAAA)n Simple_repeat Simple_repeat 4 41 0 4 1182 234 0 0 0 chrX 78354435 78354461 -88295835 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1182 344 324 48 34 chrX 78354897 78355044 -88295252 + MIR SINE MIR 31 179 -83 4 1182 242 336 26 17 chrX 78355279 78355394 -88294902 - MLT1H2 LTR MaLR -304 185 70 4 1182 378 0 0 0 chrX 78355591 78355633 -88294663 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1182 549 278 51 23 chrX 78355840 78356054 -88294242 + LTRIS4 LTR ERV1 215 434 -73 4 1182 11244 53 1 0 chrX 78356054 78358025 -88292271 + L1Md_F2 LINE L1 4468 6439 -143 4 1182 1116 68 0 12 chrX 78358289 78358452 -88291844 + L1Md_F2 LINE L1 6422 6582 0 4 1182 22 0 0 0 chrX 78358735 78358757 -88291539 + AT_rich Low_complexity Low_complexity 1 22 0 4 1182 285 244 60 12 chrX 78358757 78358840 -88291456 + LTRIS4 LTR ERV1 421 507 0 4 1182 201 39 0 0 chrX 78359432 78359458 -88290838 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4 1182 1477 205 166 9 chrX 78359482 78360143 -88290153 - Lx3C LINE L1 -2 6974 6210 4 1182 3767 73 6 0 chrX 78360289 78360782 -88289514 + L1_Mus2 LINE L1 5849 6344 -222 4 1182 2150 127 32 78 chrX 78360782 78360846 -88289450 - RLTR9F LTR ERVK 0 415 353 4 1182 519 17 0 0 chrX 78360846 78360906 -88289390 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 1182 2150 127 32 78 chrX 78360906 78361276 -88289020 - RLTR9F LTR ERVK -63 352 3 4 1182 1692 67 5 0 chrX 78361283 78361507 -88288789 + L1_Mus2 LINE L1 6341 6565 -1 4 1182 21 57 0 0 chrX 78361559 78361594 -88288702 + AT_rich Low_complexity Low_complexity 1 35 0 4 1182 960 82 0 0 chrX 78362072 78362207 -88288089 + B1_Mus1 SINE Alu 12 146 -2 4 1182 656 256 0 0 chrX 78362376 78362505 -88287791 + B1_Mus2 SINE Alu 9 137 -10 4 1182 2261 165 0 16 chrX 78362850 78362941 -88287355 + L1_Mus4 LINE L1 5508 5598 -285 4 1182 2961 29 0 0 chrX 78362941 78363287 -88287009 - ORR1A0 LTR MaLR 0 346 1 4 1182 7072 101 25 3 chrX 78363287 78364307 -88285989 + L1_Mus4 LINE L1 5594 6635 -1 4 1182 556 361 88 35 chrX 78364670 78365009 -88285287 + ORR1E LTR MaLR 3 359 0 4 1182 432 0 0 0 chrX 78365161 78365209 -88285087 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 1182 26 50 0 0 chrX 78365251 78365291 -88285005 + AT_rich Low_complexity Low_complexity 1 40 0 4 1182 228 305 57 71 chrX 78365307 78365448 -88284848 - Lx7 LINE L1 0 7696 7558 4 1182 25 0 0 0 chrX 78365515 78365540 -88284756 + AT_rich Low_complexity Low_complexity 1 25 0 4 1182 264 225 76 59 chrX 78365544 78365662 -88284634 - Lx7 LINE L1 -285 7411 7292 4 1182 303 311 21 43 chrX 78365688 78365708 -88284588 - ID_B1 SINE B4 -124 100 9 4 1182 316 311 0 0 chrX 78365708 78365782 -88284514 - ID4_ SINE ID -1 82 9 4 1182 1303 214 78 76 chrX 78366493 78366863 -88283433 - MTD LTR MaLR -8 411 41 4 1182 538 200 33 8 chrX 78367389 78367510 -88282786 + ORR1D1 LTR MaLR 1 124 -250 4 1182 947 290 65 17 chrX 78367542 78368002 -88282294 - L1_Mur3 LINE L1 -3317 2563 2082 4 1182 23 0 0 0 chrX 78368048 78368071 -88282225 + AT_rich Low_complexity Low_complexity 1 23 0 4 1182 210 244 0 0 chrX 78368072 78368117 -88282179 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1182 591 309 124 69 chrX 78368128 78368434 -88281862 - MTD LTR MaLR 0 419 97 4 1182 269 252 194 17 chrX 78368430 78368558 -88281738 - B3A SINE B2 -61 155 5 4 1182 835 194 0 34 chrX 78368575 78368589 -88281707 - B1_Mur2 SINE Alu -1 148 139 4 1182 210 24 22 67 chrX 78368589 78368634 -88281662 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1182 835 194 0 34 chrX 78368634 78368768 -88281528 - B1_Mur2 SINE Alu -11 138 5 4 1182 363 221 17 103 chrX 78368668 78368784 -88281512 - MT2B LTR ERVL -344 257 152 4 1182 914 314 108 24 chrX 78368840 78369058 -88281238 - L1_Rod LINE L1 -3842 2005 1747 4 1182 234 62 0 0 chrX 78369058 78369090 -88281206 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1182 914 316 102 22 chrX 78369090 78369833 -88280463 - L1_Rod LINE L1 -4101 1746 955 4 1182 200 196 0 38 chrX 78370875 78370928 -88279368 + T-rich Low_complexity Low_complexity 2 52 0 4 1182 380 247 121 18 chrX 78370948 78371113 -88279183 - L1MC3 LINE L1 -7 7778 7597 4 1182 207 69 0 0 chrX 78371222 78371251 -88279045 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1182 258 368 72 50 chrX 78371801 78371981 -88278315 - MLT1K LTR MaLR -230 365 182 4 1182 21 0 0 0 chrX 78372346 78372367 -88277929 + AT_rich Low_complexity Low_complexity 1 21 0 4 1182 4892 114 18 38 chrX 78372848 78374157 -88276139 + L1VL1 LINE L1 437 2061 -3822 4 1182 1050 325 26 12 chrX 78374622 78374968 -88275328 + RCHARR1 DNA MER1_type 6 356 -618 4 1182 723 307 120 78 chrX 78374991 78375517 -88274779 - Lx5 LINE L1 -18 7032 6485 4 1182 2613 221 46 11 chrX 78375532 78376290 -88274006 - Lx5 LINE L1 -890 6570 5546 4 1182 552 244 26 86 chrX 78376298 78376441 -88273855 + RCHARR1 DNA MER1_type 382 519 -455 4 1182 4011 63 0 2 chrX 78376441 78376946 -88273350 - L1_Mus2 LINE L1 -1 6565 6062 4 1182 552 244 26 86 chrX 78376946 78377035 -88273261 + RCHARR1 DNA MER1_type 520 600 -374 4 1182 25 0 0 0 chrX 78377630 78377655 -88272641 + AT_rich Low_complexity Low_complexity 1 25 0 4 1182 27 73 0 0 chrX 78378058 78378113 -88272183 + AT_rich Low_complexity Low_complexity 1 55 0 4 1182 576 310 23 5 chrX 78378379 78378593 -88271703 + L1M2 LINE L1 5042 5259 -884 4 1182 185 132 26 0 chrX 78378809 78378847 -88271449 + GA-rich Low_complexity Low_complexity 2 40 0 4 1182 266 285 108 100 chrX 78379132 78379348 -88270948 + L1_Mm LINE L1 5354 5571 -312 4 1182 830 181 0 7 chrX 78379348 78379487 -88270809 + B1_Mur2 SINE Alu 2 139 -10 4 1182 306 50 0 0 chrX 78379491 78379531 -88270765 + (CCAA)n Simple_repeat Simple_repeat 4 43 0 4 1182 256 309 56 126 chrX 78379531 78379619 -88270677 + L1_Mm LINE L1 5533 5616 -231 4 1182 309 68 0 0 chrX 78379619 78379663 -88270633 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1182 247 192 47 66 chrX 78379769 78379875 -88270421 + Charlie7 DNA MER1_type 2471 2574 -38 4 1182 24 53 0 0 chrX 78380105 78380143 -88270153 + AT_rich Low_complexity Low_complexity 1 38 0 4 1182 1456 198 73 84 chrX 78380238 78380596 -88269700 - ORR1B1 LTR MaLR 0 394 41 4 1182 283 327 103 28 chrX 78380775 78380989 -88269307 - Lx8 LINE L1 -277 7196 6967 4 1183 941 275 99 11 chrX 78381078 78381453 -88268843 + L1_Mur3 LINE L1 4423 4830 -1050 4 1183 1007 269 43 23 chrX 78381775 78382125 -88268171 + L1M2 LINE L1 5260 5616 -687 4 1183 24 53 0 0 chrX 78382179 78382217 -88268079 + AT_rich Low_complexity Low_complexity 1 38 0 4 1183 1811 300 110 29 chrX 78382218 78383356 -88266940 - Lx8 LINE L1 -31 7442 6213 4 1183 1138 257 155 6 chrX 78383356 78383673 -88266623 - ORR1D1 LTR MaLR 0 374 11 5 1183 244 217 0 14 chrX 78383944 78384014 -88266282 - L1M5 LINE L1 -3248 2898 2830 5 1183 198 103 0 0 chrX 78384018 78384047 -88266249 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1183 338 315 186 19 chrX 78384492 78384735 -88265561 + MER31B LTR ERV1 62 331 -154 5 1183 221 0 35 0 chrX 78384753 78384782 -88265514 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 5 1183 353 282 133 58 chrX 78384966 78385192 -88265104 - L1M4 LINE L1 -840 5306 5064 5 1183 599 74 24 32 chrX 78385301 78385426 -88264870 + L1_Mus3 LINE L1 6515 6638 0 5 1183 1154 62 0 0 chrX 78385430 78385576 -88264720 + B1_Mm SINE Alu 1 146 -1 5 1183 198 103 0 0 chrX 78385576 78385605 -88264691 + (GAAA)n Simple_repeat Simple_repeat 1 29 0 5 1183 312 27 0 0 chrX 78385814 78385851 -88264445 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1183 478 228 10 29 chrX 78385861 78385965 -88264331 - B1_Mur1 SINE Alu -6 143 42 5 1183 264 30 0 0 chrX 78386916 78386949 -88263347 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1183 299 150 17 0 chrX 78388621 78388681 -88261615 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 1183 1354 182 23 11 chrX 78389106 78389365 -88260931 + ORR1B2 LTR MaLR 3 264 -103 5 1183 3014 138 4 4 chrX 78389365 78389830 -88260466 - MT2B LTR ERVL 0 601 137 5 1183 1629 158 34 56 chrX 78389821 78390231 -88260065 + RMER17C LTR ERVK 10 410 0 5 1183 1056 69 21 0 chrX 78390231 78390375 -88259921 - MT2B LTR ERVL -454 147 1 5 1183 429 111 27 14 chrX 78390381 78390454 -88259842 + ORR1B2 LTR MaLR 291 364 -3 5 1183 608 157 0 29 chrX 78390457 78390562 -88259734 + ORR1B2-int LTR MaLR 1 102 -1407 5 1183 7979 57 0 0 chrX 78390569 78391659 -88258637 - L1Md_F2 LINE L1 0 6582 5497 5 1183 4562 64 0 3 chrX 78391659 78392251 -88258045 + L1_Mm LINE L1 4572 5161 -722 5 1183 4784 204 89 91 chrX 78392251 78393672 -88256624 + ORR1B2-int LTR MaLR 91 1509 0 5 1183 1072 178 55 0 chrX 78393672 78393874 -88256422 + ORR1B2 LTR MaLR 1 213 -154 5 1183 408 305 140 73 chrX 78394275 78394632 -88255664 + L1MC4 LINE L1 6961 7341 -701 5 1183 507 279 53 50 chrX 78394833 78395154 -88255142 + L1ME2 LINE L1 5778 6099 -65 5 1183 381 241 0 0 chrX 78395205 78395308 -88254988 - L1MA9 LINE L1 -164 6004 5902 5 1183 28 48 0 0 chrX 78395458 78395500 -88254796 + AT_rich Low_complexity Low_complexity 1 42 0 5 1183 983 142 147 5 chrX 78395855 78396053 -88254243 + URR1A DNA MER1_type 1 226 0 5 1183 36032 36 3 18 chrX 78396239 78399940 -88250356 + L1Md_T LINE L1 440 4072 -1811 5 1183 1139 48 0 7 chrX 78399940 78400086 -88250210 - B1_Mus2 SINE Alu 0 147 3 5 1183 36032 28 3 9 chrX 78400086 78401602 -88248694 + L1Md_T LINE L1 4073 5586 -297 5 1183 8266 42 0 0 chrX 78401602 78402598 -88247698 + L1Md_T LINE L1 5587 6582 0 5 1183 863 157 99 0 chrX 78403073 78403245 -88247051 - URR1A DNA MER1_type -1 225 37 5 1183 347 80 0 0 chrX 78404092 78404169 -88246127 - L1Md_F2 LINE L1 0 6582 6516 5 1183 4228 166 42 7 chrX 78405361 78406108 -88244188 - Lx4A LINE L1 -3 7055 6283 5 1183 228 300 11 81 chrX 78406141 78406228 -88244068 + RLTR25A LTR ERVK 35 115 -988 5 1183 2791 76 5 0 chrX 78406301 78406671 -88243625 - L1_Mus1 LINE L1 0 6567 6196 5 1183 418 152 13 0 chrX 78406872 78406951 -88243345 - Lx3C LINE L1 -1169 4708 4629 5 1183 7976 141 14 31 chrX 78406966 78409272 -88241024 + Lx3C LINE L1 4722 6974 -2 5 1183 660 87 0 0 chrX 78409950 78410042 -88240254 + (TA)n Simple_repeat Simple_repeat 2 93 0 5 1183 2817 86 31 22 chrX 78410612 78411027 -88239269 + BGLII LTR ERVK 3 421 0 5 1183 645 199 59 53 chrX 78411496 78411666 -88238630 - Lx4B LINE L1 -626 6432 6262 5 1183 2047 126 0 3 chrX 78411655 78411965 -88238331 + L1_Mur2 LINE L1 4921 5229 -648 5 1183 2474 228 40 61 chrX 78411961 78412586 -88237710 + Lx5 LINE L1 6438 7049 -1 5 1183 238 292 15 15 chrX 78413319 78413385 -88236911 - B1_Mus2 SINE Alu -61 86 21 5 1183 4577 164 32 69 chrX 78413704 78413844 -88236452 - RLTR21 LTR ERVK -322 1250 1125 5 1183 4870 132 17 60 chrX 78413844 78414771 -88235525 + RMER17D LTR ERVK 1 887 -2 5 1183 4577 164 32 69 chrX 78414771 78414970 -88235326 - RLTR21 LTR ERVK -448 1124 926 5 1183 441 0 0 0 chrX 78414970 78415019 -88235277 + (CAAAA)n Simple_repeat Simple_repeat 5 53 0 5 1183 4577 164 32 69 chrX 78415019 78415584 -88234712 - RLTR21 LTR ERVK -647 925 380 5 1183 956 82 66 15 chrX 78415584 78415721 -88234575 - B1_Mus1 SINE Alu 0 148 5 5 1183 4577 164 32 69 chrX 78415721 78415813 -88234483 - RLTR21 LTR ERVK -1193 379 291 5 1183 298 232 42 3 chrX 78415897 78416027 -88234269 - Lx7 LINE L1 -1773 5923 5757 5 1183 232 288 61 0 chrX 78416047 78416113 -88234183 - L1_Rod LINE L1 -3606 2241 2172 5 1183 5161 59 1 0 chrX 78416113 78416762 -88233534 - L1Md_F2 LINE L1 -12 6570 5921 5 1183 1693 199 0 3 chrX 78416768 78417055 -88233241 - RLTR21 LTR ERVK -1286 286 1 5 1183 442 111 14 0 chrX 78417055 78417127 -88233169 + MusHAL1 LINE L1 1390 1462 -1250 5 1183 10065 169 49 21 chrX 78417116 78418527 -88231769 + Lx2B LINE L1 3769 5253 -624 5 1183 1081 88 0 13 chrX 78418527 78418677 -88231619 + B1_Mus1 SINE Alu 1 148 0 5 1183 10065 181 39 21 chrX 78418677 78419560 -88230736 + Lx2B LINE L1 5254 6125 -875 5 1183 2395 236 17 49 chrX 78419563 78420199 -88230097 - RMER13B LTR ERVK -4 904 289 5 1183 646 339 19 32 chrX 78420199 78420512 -88229784 + L1_Mur3 LINE L1 64 607 -7105 5 1183 748 138 48 7 chrX 78420490 78420636 -88229660 - L1_Mur2 LINE L1 -2982 2895 2744 5 1183 1018 257 167 18 chrX 78420636 78420977 -88229319 - MTD LTR MaLR -27 392 1 5 1183 351 0 0 0 chrX 78421531 78421570 -88228726 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 5 1183 5021 107 113 2 chrX 78421628 78422488 -88227808 + L1_Mur1 LINE L1 3995 4949 -937 5 1183 29596 98 50 11 chrX 78423160 78429108 -88221188 - L1Md_F2 LINE L1 -12 6570 392 5 1183 455 260 97 0 chrX 78430288 78430442 -88219854 - MER110 LTR ERV1 -62 429 261 5 1183 6621 113 9 3 chrX 78430658 78431703 -88218593 - Lx3B LINE L1 -1006 4880 3830 5 1183 6358 127 9 10 chrX 78431701 78433063 -88217233 + Lx3B LINE L1 4881 6239 -734 5 1183 2937 168 43 64 chrX 78433063 78433373 -88216923 - RLTR26 LTR ERVK 0 642 333 5 1183 797 0 11 0 chrX 78433373 78433466 -88216830 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 5 1183 2508 81 3 11 chrX 78433470 78433820 -88216476 - L1_Mus2 LINE L1 -2 6564 6218 5 1183 2937 168 43 64 chrX 78433820 78434128 -88216168 - RLTR26 LTR ERVK -310 332 34 5 1183 4119 113 5 3 chrX 78434128 78434721 -88215575 + Lx3B LINE L1 6242 6835 -146 5 1183 9432 102 1 1 chrX 78434720 78436080 -88214216 - L1_Mm LINE L1 -2236 3647 2288 5 1183 3127 92 7 20 chrX 78436080 78436537 -88213759 + L1_Mus1 LINE L1 6117 6567 0 5 1183 635 160 45 39 chrX 78436565 78436721 -88213575 + Lx3B LINE L1 6820 6976 -5 5 1183 324 64 0 0 chrX 78437263 78437310 -88212986 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 5 1183 25 51 0 0 chrX 78437773 78437812 -88212484 + AT_rich Low_complexity Low_complexity 1 39 0 5 1183 29 28 0 0 chrX 78437969 78438005 -88212291 + AT_rich Low_complexity Low_complexity 1 36 0 5 1183 5187 101 9 3 chrX 78438038 78438773 -88211523 - L1Md_F2 LINE L1 -19 6563 5824 5 1183 195 42 0 0 chrX 78439130 78439154 -88211142 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1183 459 63 0 0 chrX 78439334 78439397 -88210899 + (TG)n Simple_repeat Simple_repeat 1 63 0 5 1183 28120 35 14 3 chrX 78440179 78445583 -88204713 + L1Md_A LINE L1 99 5586 -297 5 1183 8640 24 0 0 chrX 78445583 78446579 -88203717 + L1Md_A LINE L1 5587 6582 0 5 1183 18299 26 27 27 chrX 78446645 78448363 -88201933 + L1_Mm LINE L1 3150 4913 -970 5 1183 233 167 46 77 chrX 78448363 78448428 -88201868 - RMER20A LTR ERVK -268 248 186 5 1183 18299 26 27 27 chrX 78448428 78449082 -88201214 + L1_Mm LINE L1 4914 5586 -297 5 1183 8687 21 0 0 chrX 78449082 78450078 -88200218 + L1Md_A LINE L1 5587 6582 0 5 1183 18340 25 27 27 chrX 78450147 78451865 -88198431 + L1_Mm LINE L1 3150 4913 -970 5 1183 233 167 46 77 chrX 78451865 78451930 -88198366 - RMER20A LTR ERVK -268 248 186 5 1183 18340 25 27 27 chrX 78451930 78452584 -88197712 + L1_Mm LINE L1 4914 5586 -297 5 1183 8614 26 0 0 chrX 78452584 78453580 -88196716 + L1Md_A LINE L1 5587 6582 0 5 1183 19654 26 0 0 chrX 78453655 78456092 -88194204 + L1Md_T LINE L1 3150 5586 -297 5 1183 7995 59 0 0 chrX 78456092 78457088 -88193208 + L1Md_T LINE L1 5587 6582 0 5 1183 248 310 58 119 chrX 78457896 78458043 -88192253 + MLT1G3 LTR MaLR 182 322 -257 5 1183 2484 68 3 3 chrX 78458252 78458578 -88191718 + IAPEY2_LTR LTR ERVK 32 357 0 5 1183 22 0 0 0 chrX 78458597 78458619 -88191677 + AT_rich Low_complexity Low_complexity 1 22 0 5 1183 567 225 79 7 chrX 78459189 78459328 -88190968 - B1_Mur4 SINE Alu -1 149 1 5 1183 202 234 0 0 chrX 78459347 78459394 -88190902 + A-rich Low_complexity Low_complexity 1 47 0 5 1183 554 284 25 13 chrX 78459740 78459897 -88190399 - MER5A DNA MER1_type -29 160 2 5 1183 402 302 0 0 chrX 78460232 78460328 -88189968 + B4A SINE B4 2 97 -195 5 1183 581 179 0 8 chrX 78460840 78460964 -88189332 + CT-rich Low_complexity Low_complexity 3 125 0 5 1183 1724 269 75 25 chrX 78461622 78462262 -88188034 - Lx2B LINE L1 -6 6994 6329 5 1183 3141 215 46 16 chrX 78462252 78463522 -88186774 - Lx2B LINE L1 -8 6646 5364 5 1183 6720 127 14 11 chrX 78463524 78465051 -88185245 - L1_Mus4 LINE L1 0 6636 5108 5 1183 1127 82 0 0 chrX 78465051 78465197 -88185099 - B1_Mm SINE Alu -1 146 1 5 1183 4298 169 20 17 chrX 78465197 78465257 -88185039 - L1_Mus4 LINE L1 -776 5107 5042 5 1183 2854 128 216 117 chrX 78465258 78465738 -88184558 - RMER17A2 LTR ERVK 0 906 473 5 1183 288 53 0 0 chrX 78465738 78465776 -88184520 + (CGAGA)n Simple_repeat Simple_repeat 2 39 0 5 1183 2854 128 216 117 chrX 78465776 78466119 -88184177 - RMER17A2 LTR ERVK -434 472 3 5 1183 18170 168 27 7 chrX 78466119 78469077 -88181219 - L1_Mus4 LINE L1 -837 5046 2072 5 1183 261 0 0 0 chrX 78469077 78469106 -88181190 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 1183 18170 188 19 11 chrX 78469106 78471464 -88178832 - L1_Mus4 LINE L1 -3812 2071 524 5 1183 16921 169 20 55 chrX 78471477 78475399 -88174897 - L1_Mus2 LINE L1 0 6566 2870 5 1183 594 0 0 0 chrX 78475399 78475465 -88174831 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 5 1183 16921 193 25 72 chrX 78475465 78476621 -88173675 - L1_Mus2 LINE L1 -3017 2869 1698 5 1183 848 137 0 45 chrX 78476615 78476791 -88173505 - MusHAL1 LINE L1 -1723 989 822 5 1183 2972 124 35 7 chrX 78476787 78477354 -88172942 + MusHAL1 LINE L1 240 822 -1890 5 1183 7299 160 63 16 chrX 78477351 78478958 -88171338 - Lx2B LINE L1 -512 5374 3692 5 1183 483 179 3 3 chrX 78479006 78479087 -88171209 + RLTR9C LTR ERVK 322 409 0 5 1183 1190 198 49 144 chrX 78479088 78479596 -88170700 + MMETn-int LTR ERVK 1 460 -4384 5 1183 344 0 65 0 chrX 78479606 78479652 -88170644 + (GGGTG)n Simple_repeat Simple_repeat 3 51 0 5 1183 3183 124 20 14 chrX 78479877 78480432 -88169864 + ETnERV2-int LTR ERVK 3442 3999 -3407 5 1183 274 211 60 45 chrX 78480466 78480600 -88169696 - Lx8 LINE L1 -5 7468 7333 5 1183 594 187 18 10 chrX 78480605 78480725 -88169571 + B1_Mur1 SINE Alu 25 140 -9 5 1183 414 0 0 0 chrX 78480725 78480771 -88169525 + (CTAA)n Simple_repeat Simple_repeat 3 48 0 5 1183 765 193 0 0 chrX 78480797 78480937 -88169359 + B1_Mur4 SINE Alu 6 145 -5 5 1183 405 256 0 12 chrX 78480957 78481040 -88169256 - RSINE1 SINE B4 0 165 84 6 1183 3098 189 83 58 chrX 78481071 78482166 -88168130 + MMETn-int LTR ERVK 2341 3105 -1739 5 1183 4987 29 0 8 chrX 78482166 78482758 -88167538 - L1Md_F2 LINE L1 -12 6570 5984 6 1183 3098 158 57 16 chrX 78482758 78482865 -88167431 + MMETn-int LTR ERVK 3106 3157 -1687 5 1183 914 176 62 31 chrX 78482914 78483108 -88167188 + MMETn-int LTR ERVK 6223 6422 -984 5 1183 438 133 0 0 chrX 78483324 78483399 -88166897 + MMETn-int LTR ERVK 7331 7405 -1 5 1183 1711 184 32 62 chrX 78483399 78483804 -88166492 + RLTR9C LTR ERVK 1 393 0 5 1183 9082 165 77 78 chrX 78483805 78485261 -88165035 - Lx2B LINE L1 -2190 3696 2244 5 1183 3330 33 5 2 chrX 78485261 78485656 -88164640 - MTA_Mm LTR MaLR 0 396 1 6 1183 8729 55 5 6 chrX 78485656 78486755 -88163541 - MTA_Mm-int LTR MaLR 0 1098 1 6 1183 1077 57 0 28 chrX 78486755 78486899 -88163397 - MTA_Mm LTR MaLR 0 396 257 6 1183 307 0 0 70 chrX 78486878 78486921 -88163375 - MTA_Mm LTR MaLR -355 41 2 6 1183 9082 161 70 66 chrX 78486921 78487813 -88162483 - Lx2B LINE L1 -3665 2221 1181 5 1183 274 159 9 32 chrX 78487813 78487882 -88162414 - B2_Mm2 SINE B2 -5 188 117 6 1183 1598 165 29 70 chrX 78487882 78488266 -88162030 - RLTR9A LTR ERVK 0 368 1 6 1183 323 167 27 27 chrX 78488267 78488341 -88161955 - ETnERV2-int LTR ERVK -2 7404 7331 6 1183 33831 36 0 0 chrX 78488480 78493762 -88156534 + L1Md_T LINE L1 211 5589 -297 6 1183 8920 9 0 1 chrX 78493762 78494759 -88155537 + L1Md_T LINE L1 5590 6585 0 6 1183 7553 177 108 29 chrX 78494784 78494979 -88155317 - ETnERV2-int LTR ERVK -1790 3616 3404 6 1183 4125 84 3 16 chrX 78494979 78495292 -88155004 - LTRIS2 LTR ERV1 0 564 252 6 1183 195 69 0 0 chrX 78495292 78495321 -88154975 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1183 4125 84 3 16 chrX 78495321 78495578 -88154718 - LTRIS2 LTR ERV1 -313 251 1 6 1183 7553 177 108 29 chrX 78495578 78495862 -88154434 - ETnERV2-int LTR ERVK -2003 3403 3121 6 1183 2654 78 143 139 chrX 78495862 78496372 -88153924 - RLTR1B LTR ERV1 0 512 1 6 1183 12612 166 85 45 chrX 78496372 78496621 -88153675 - ETnERV2-int LTR ERVK -3312 4094 3940 6 1183 327 65 0 0 chrX 78496621 78496667 -88153629 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 6 1183 12612 159 71 55 chrX 78496667 78497040 -88153256 - ETnERV2-int LTR ERVK -3467 3939 3554 6 1183 183 42 0 0 chrX 78497040 78497064 -88153232 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1183 12612 159 71 55 chrX 78497064 78498690 -88151606 - ETnERV2-int LTR ERVK -3853 3553 1862 6 1183 4607 6 6 0 chrX 78498690 78499200 -88151096 + L1Md_T LINE L1 6069 6581 -1 6 1183 12612 159 71 55 chrX 78499200 78499998 -88150298 - ETnERV2-int LTR ERVK -5545 1861 1093 6 1183 204 97 0 0 chrX 78500080 78500111 -88150185 + (TTTTA)n Simple_repeat Simple_repeat 4 34 0 1 1183 1722 161 38 41 chrX 78500425 78500794 -88149502 - RLTR9A LTR ERVK 0 368 1 2 1183 823 119 0 0 chrX 78500794 78500915 -88149381 - B2_Mm2 SINE B2 -68 127 7 3 1183 2098 198 54 2 chrX 78500918 78500939 -88149357 - L1_Mur1 LINE L1 -5795 1187 1147 4 1183 185 0 0 39 chrX 78500939 78500965 -88149331 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 5 1183 2098 241 58 20 chrX 78500965 78501686 -88148610 - L1_Mur1 LINE L1 -5836 1146 29 4 1183 987 237 25 16 chrX 78501685 78502006 -88148290 - L1_Mur2 LINE L1 -4206 1671 1348 6 1183 405 127 291 10 chrX 78502026 78502129 -88148167 - Lx2 LINE L1 -1 6996 6865 7 1183 21 82 0 0 chrX 78502309 78502358 -88147938 + AT_rich Low_complexity Low_complexity 1 49 0 8 1183 333 47 0 0 chrX 78502572 78502615 -88147681 + (TG)n Simple_repeat Simple_repeat 1 43 0 9 1183 704 236 28 93 chrX 78503403 78503521 -88146775 - RMER6D LTR ERVK 0 720 615 1 1183 4152 118 20 2 chrX 78503521 78504107 -88146189 - Lx LINE L1 -7 6647 6051 1 1183 704 236 28 93 chrX 78504107 78504203 -88146093 - RMER6D LTR ERVK -106 614 520 1 1183 4761 88 23 3 chrX 78504203 78504944 -88145352 - L1Md_F2 LINE L1 0 6582 5890 1 1183 657 251 19 71 chrX 78504944 78505154 -88145142 - RMER6C LTR ERVK -85 671 473 1 1183 433 273 75 31 chrX 78505158 78505317 -88144979 + RLTR15 LTR ERVK 1 166 -193 1 1183 921 205 224 57 chrX 78505656 78506008 -88144288 - RMER6C LTR ERVK -259 431 21 1 1183 988 79 0 0 chrX 78506330 78506456 -88143840 + B1_Mus2 SINE Alu 2 127 -20 1 1183 557 241 0 78 chrX 78506331 78506484 -88143812 + ID_B1 SINE B4 84 224 0 1 1183 1001 190 26 45 chrX 78506456 78506784 -88143512 + LTRIS5 LTR ERV1 1 436 -11 1 1183 5706 261 53 48 chrX 78506956 78509061 -88141235 + MuRRS4-int LTR ERV1 1 2371 -5407 1 1183 185 0 40 0 chrX 78509061 78509086 -88141210 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1 1183 4422 277 67 56 chrX 78509086 78509333 -88140963 + MuRRS4-int LTR ERV1 2372 2621 -5157 1 1183 3557 212 19 24 chrX 78509332 78510140 -88140156 + MuRRS-int LTR ERV1 3760 4449 -241 1 1183 1063 206 64 0 chrX 78510169 78510387 -88139909 + MuRRS-int LTR ERV1 4459 4690 0 1 1183 1054 152 51 51 chrX 78510387 78510719 -88139577 + LTRIS5 LTR ERV1 1 564 0 1 1183 204 40 0 0 chrX 78510796 78510821 -88139475 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 2 1183 1622 142 0 0 chrX 78511741 78511987 -88138309 - L1_Mus4 LINE L1 0 6636 6391 2 1183 186 43 0 0 chrX 78512011 78512034 -88138262 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 147 487 285 61 15 chrX 78512034 78512166 -88138130 - B1_Mur1 SINE Alu -10 139 2 2 1184 210 348 0 0 chrX 78512242 78512311 -88137985 - ID2 SINE ID -1 82 14 2 1184 391 306 99 0 chrX 78512352 78512473 -88137823 - ID_B1 SINE B4 0 224 92 2 1184 594 296 0 0 chrX 78512884 78513019 -88137277 - B1_Mur1 SINE Alu -14 135 1 2 1184 2561 250 26 36 chrX 78513701 78513856 -88136440 - Lx9 LINE L1 -1 7643 7494 2 1184 180 0 0 0 chrX 78513856 78513876 -88136420 + (TG)n Simple_repeat Simple_repeat 2 21 0 2 1184 2561 250 26 36 chrX 78513876 78514403 -88135893 - Lx9 LINE L1 -151 7493 6964 2 1184 387 0 0 0 chrX 78514403 78514446 -88135850 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 2 1184 2561 250 26 36 chrX 78514446 78514543 -88135753 - Lx9 LINE L1 -681 6963 6873 2 1184 25 31 0 0 chrX 78514609 78514641 -88135655 + AT_rich Low_complexity Low_complexity 1 32 0 3 1184 396 0 0 0 chrX 78514649 78514693 -88135603 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 3 1184 6153 137 4 1 chrX 78514727 78516044 -88134252 - Lx LINE L1 -168 6486 5167 3 1184 1677 247 49 10 chrX 78516040 78516425 -88133871 - Lx9 LINE L1 -844 6800 6401 2 1184 742 110 16 8 chrX 78516453 78516581 -88133715 + (TCCTG)n Simple_repeat Simple_repeat 4 132 0 3 1184 594 0 0 0 chrX 78516581 78516647 -88133649 + (TTTTC)n Simple_repeat Simple_repeat 3 68 0 3 1184 842 219 148 43 chrX 78516658 78517138 -88133158 - Lx9 LINE L1 -1250 6394 5754 2 1184 7324 235 131 50 chrX 78517831 78520536 -88129760 - Lx9 LINE L1 -78 5769 2846 2 1184 1575 210 66 30 chrX 78520538 78520743 -88129553 - ORR1C2 LTR MaLR 0 384 188 3 1184 623 13 13 0 chrX 78520743 78520819 -88129477 + (GA)n Simple_repeat Simple_repeat 2 78 0 3 1184 1575 210 66 30 chrX 78520819 78520977 -88129319 - ORR1C2 LTR MaLR -197 187 8 3 1184 863 230 43 75 chrX 78521044 78521298 -88128998 - RLTR41 LTR ERV1 -200 246 1 3 1184 1018 311 40 40 chrX 78521387 78521943 -88128353 - RLTR6-int LTR ERV1 -64 7714 7159 3 1184 2360 311 50 63 chrX 78522402 78523418 -88126878 - MuRRS4-int LTR ERV1 -1229 3834 2834 3 1184 180 0 0 0 chrX 78523418 78523438 -88126858 + (CAGCC)n Simple_repeat Simple_repeat 3 22 0 4 1184 2360 311 50 63 chrX 78523438 78524055 -88126241 - MuRRS4-int LTR ERV1 -2230 2833 2223 3 1184 1947 68 41 22 chrX 78524072 78524389 -88125907 + MTB-int LTR MaLR 776 1098 0 4 1184 2608 118 39 3 chrX 78524391 78524775 -88125521 + MTB LTR MaLR 3 400 0 4 1184 1384 329 33 28 chrX 78524905 78525684 -88124612 - MMERGLN-int LTR ERV1 -4178 3378 2596 4 1184 3334 199 17 48 chrX 78525733 78526394 -88123902 + RLTR26 LTR ERVK 1 640 -2 4 1184 777 65 0 0 chrX 78526535 78526643 -88123653 + (TC)n Simple_repeat Simple_repeat 1 108 0 4 1184 908 144 13 216 chrX 78526796 78527106 -88123190 + RMER17A-int LTR ERVK 838 1084 -644 4 1184 1519 192 11 87 chrX 78527171 78527537 -88122759 + RMER17A-int LTR ERVK 1084 1421 -307 4 1184 479 214 156 38 chrX 78527551 78527711 -88122585 + RMER17A-int LTR ERVK 1546 1724 -4 4 1184 2175 243 60 106 chrX 78527721 78528696 -88121600 + RMER17B LTR ERVK 2 899 -9 4 1184 1419 316 50 49 chrX 78528714 78530142 -88120154 - MMERGLN-int LTR ERV1 -5114 2487 1098 4 1184 738 138 40 0 chrX 78531045 78531197 -88119099 + GA-rich Low_complexity Low_complexity 3 160 0 4 1184 1346 211 103 20 chrX 78531266 78531595 -88118701 - RLTR41 LTR ERV1 -12 642 116 4 1184 4305 141 12 6 chrX 78531607 78532292 -88118004 + Lx2A1 LINE L1 6113 6801 -207 4 1184 24 0 0 0 chrX 78532908 78532932 -88117364 + AT_rich Low_complexity Low_complexity 1 24 0 4 1184 1176 82 0 13 chrX 78533067 78533216 -88117080 + B1_Mm SINE Alu 1 147 0 5 1184 1170 82 7 0 chrX 78533491 78533637 -88116659 - B1_Mus1 SINE Alu 0 148 2 5 1184 720 12 0 0 chrX 78533790 78533874 -88116422 - L1Md_A LINE L1 -1 6581 6498 5 1184 510 259 119 25 chrX 78534021 78534223 -88116073 - MER110 LTR ERV1 -15 476 256 5 1184 352 206 80 6 chrX 78534485 78534614 -88115682 - B3 SINE B2 0 216 48 5 1184 666 220 12 3 chrX 78534787 78534959 -88115337 - L1Md_F LINE L1 -5805 919 725 5 1184 437 181 83 45 chrX 78534967 78535100 -88115196 - L1Md_F LINE L1 -5813 803 666 5 1184 432 301 27 25 chrX 78535112 78535388 -88114908 - L1VL1 LINE L1 -5927 491 215 5 1184 3231 81 0 8 chrX 78535493 78535892 -88114404 + MTA_Mm LTR MaLR 1 396 0 5 1184 3759 86 12 27 chrX 78535892 78536452 -88113844 + MTA_Mm-int LTR MaLR 1 552 -546 5 1184 2844 175 120 8 chrX 78536452 78537010 -88113286 + L1_Mur1 LINE L1 1127 1801 -4085 5 1184 1609 101 5 5 chrX 78537010 78537270 -88113026 + L1_Mus2 LINE L1 6338 6566 0 5 1184 2844 182 189 12 chrX 78537270 78537516 -88112780 + L1_Mur1 LINE L1 1802 2062 -3824 5 1184 668 189 41 8 chrX 78537522 78537645 -88112651 + ETnERV2-int LTR ERVK 7070 7196 -210 6 1184 558 0 0 0 chrX 78538548 78538610 -88111686 + (GA)n Simple_repeat Simple_repeat 1 62 0 6 1184 2005 189 136 39 chrX 78538610 78539118 -88111178 + RMER16-int LTR ERVK 263 819 -4587 6 1184 607 191 26 0 chrX 78539123 78539238 -88111058 + RMER16-int LTR ERVK 938 1055 -5082 6 1184 7541 152 60 25 chrX 78539258 78540898 -88109398 + ETnERV2-int LTR ERVK 2934 4323 -3083 6 1184 310 253 31 31 chrX 78540872 78540970 -88109326 + RNERVK23-int LTR ERVK 6234 6331 -1886 6 1184 1338 291 17 17 chrX 78541644 78542066 -88108230 + RNERVK23-int LTR ERVK 7405 7826 -391 6 1184 4290 166 17 19 chrX 78542097 78542793 -88107503 + ETnERV2-int LTR ERVK 6494 7188 -218 6 1184 663 314 21 25 chrX 78543795 78544030 -88106266 + MTD LTR MaLR 12 245 -174 6 1184 260 247 22 45 chrX 78544032 78544121 -88106175 + RLTR9A LTR ERVK 14 100 -268 6 1184 649 258 40 7 chrX 78544209 78544332 -88105964 + MTD LTR MaLR 217 344 -75 6 1184 275 71 24 0 chrX 78544332 78544374 -88105922 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 6 1184 649 258 40 7 chrX 78544374 78544402 -88105894 + MTD LTR MaLR 345 372 -47 6 1184 358 172 0 15 chrX 78544880 78544945 -88105351 + MTD LTR MaLR 356 419 -2 6 1184 1888 281 77 51 chrX 78545245 78546508 -88103788 + L1_Mur3 LINE L1 94 1377 -4503 6 1184 405 0 0 0 chrX 78546508 78546553 -88103743 + (TA)n Simple_repeat Simple_repeat 2 46 0 7 1184 688 176 95 17 chrX 78546553 78546571 -88103725 + L1_Mur3 LINE L1 1378 1399 -4481 6 1184 1701 218 164 0 chrX 78546633 78547083 -88103213 + L1_Mur3 LINE L1 3776 4299 -1581 6 1184 3387 46 18 5 chrX 78547083 78547474 -88102822 - MTA_Mm LTR MaLR 0 396 1 7 1184 2027 56 3 3 chrX 78547474 78547762 -88102534 - MTA_Mm-int LTR MaLR 0 1098 811 7 1184 2026 48 0 0 chrX 78547762 78548014 -88102282 + L1_Mm LINE L1 2140 2391 -3492 7 1184 3021 65 5 0 chrX 78548014 78548412 -88101884 - MTA_Mm-int LTR MaLR -698 400 1 7 1184 3419 46 15 3 chrX 78548412 78548803 -88101493 - MTA_Mm LTR MaLR 0 396 1 7 1184 4744 208 98 16 chrX 78548803 78549254 -88101042 + L1_Mur3 LINE L1 4295 4818 -1062 6 1184 324 102 0 0 chrX 78549254 78549303 -88100993 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1184 4744 208 98 16 chrX 78549303 78550158 -88100138 + L1_Mur3 LINE L1 4819 5708 -172 6 1184 2559 290 60 23 chrX 78550144 78551006 -88099290 + Lx8 LINE L1 6444 7337 -136 7 1184 413 194 32 0 chrX 78551089 78551182 -88099114 + L1_Mus3 LINE L1 6524 6619 -19 7 1184 1983 113 19 53 chrX 78551244 78551563 -88098733 + L1_Mus2 LINE L1 6259 6566 0 7 1184 781 195 18 0 chrX 78552353 78552522 -88097774 + URR1A DNA MER1_type 55 226 0 7 1184 2055 189 19 31 chrX 78552894 78553314 -88096982 + RLTR25B LTR ERVK 23 437 -591 7 1184 7878 182 11 21 chrX 78553350 78555128 -88095168 - Lx4A LINE L1 -2 7056 5288 7 1184 1811 196 3 6 chrX 78555128 78555467 -88094829 - Lx2 LINE L1 -1 6996 6659 8 1184 20890 125 16 51 chrX 78555465 78558046 -88092250 - L1Md_F2 LINE L1 -1 6581 4312 8 1184 2801 106 10 0 chrX 78558046 78558442 -88091854 + MTB LTR MaLR 1 400 0 8 1184 20890 171 18 80 chrX 78558442 78558816 -88091480 - L1Md_F2 LINE L1 -1566 4311 3945 8 1184 1511 217 6 58 chrX 78558816 78559159 -88091137 - ORR1A3 LTR MaLR -1 325 1 8 1184 20890 171 18 80 chrX 78559159 78561024 -88089272 - L1Md_F2 LINE L1 -1933 3944 2050 8 1184 183 129 0 0 chrX 78561024 78561055 -88089241 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 1184 20890 176 13 64 chrX 78561055 78562567 -88087729 - L1Md_F2 LINE L1 -3828 2049 571 8 1184 1809 206 260 14 chrX 78562567 78563128 -88087168 + RLTR25B LTR ERVK 402 1100 -3 7 1184 5073 5 10 5 chrX 78563321 78563908 -88086388 + L1Md_A LINE L1 4997 5586 -297 8 1184 9046 1 0 0 chrX 78563908 78564904 -88085392 + L1Md_A LINE L1 5587 6582 0 8 1184 475 264 111 34 chrX 78565459 78565695 -88084601 - MER58B DNA MER1_type -31 310 52 8 1184 461 306 36 68 chrX 78565752 78565973 -88084323 + B3A SINE B2 1 214 -2 8 1184 316 318 55 27 chrX 78566000 78566110 -88084186 - B1F SINE Alu -1 119 7 8 1184 732 195 0 0 chrX 78566904 78567053 -88083243 + GA-rich Low_complexity Low_complexity 4 152 0 8 1184 694 265 0 13 chrX 78567053 78567202 -88083094 + RSINE1 SINE B4 11 157 -8 9 1184 207 0 0 0 chrX 78567567 78567590 -88082706 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9 1184 952 160 55 11 chrX 78567946 78568129 -88082167 - B2_Mm2 SINE B2 0 195 5 9 1184 477 391 7 0 chrX 78568135 78568286 -88082010 - ID_B1 SINE B4 -13 211 60 9 1184 3617 196 35 34 chrX 78569033 78570132 -88080164 + L1_Mur2 LINE L1 509 1613 -4264 9 1184 758 159 12 18 chrX 78570132 78570299 -88079997 + Lx2 LINE L1 6823 6988 -9 9 1184 768 22 0 0 chrX 78570306 78570396 -88079900 + (GAA)n Simple_repeat Simple_repeat 2 91 0 9 1184 3617 154 19 29 chrX 78570396 78570709 -88079587 + L1_Mur2 LINE L1 1614 1922 -3955 9 1184 329 276 51 0 chrX 78570709 78570807 -88079489 - ORR1D1 LTR MaLR -6 368 266 9 1184 1414 257 11 57 chrX 78570808 78571179 -88079117 + ORR1D1 LTR MaLR 2 355 -19 9 1184 937 286 36 22 chrX 78571187 78571296 -88079000 - ORR1D1 LTR MaLR -95 279 171 9 1184 2536 111 50 5 chrX 78571296 78571677 -88078619 - MTB LTR MaLR 0 400 3 9 1184 937 286 36 22 chrX 78571677 78571842 -88078454 - ORR1D1 LTR MaLR -204 170 1 9 1184 672 299 9 14 chrX 78571977 78572194 -88078102 + B3 SINE B2 1 216 0 1 1184 397 218 52 43 chrX 78572460 78572575 -88077721 - MTD LTR MaLR -14 405 290 1 1184 718 345 9 5 chrX 78573012 78573222 -88077074 - B3 SINE B2 -5 211 1 1 1184 24 0 0 0 chrX 78573827 78573851 -88076445 + AT_rich Low_complexity Low_complexity 1 24 0 1 1184 7027 99 23 3 chrX 78574272 78575545 -88074751 - L1_Mus3 LINE L1 0 6638 5472 1 1184 23 33 0 0 chrX 78575959 78575989 -88074307 + AT_rich Low_complexity Low_complexity 1 30 0 1 1184 1606 200 47 0 chrX 78576086 78576426 -88073870 + Lx3B LINE L1 6617 6972 -1 1 1184 29 0 0 0 chrX 78576428 78576457 -88073839 + AT_rich Low_complexity Low_complexity 1 29 0 1 1184 5875 244 18 12 chrX 78578709 78580360 -88069936 - Lx5 LINE L1 -8 7042 5378 1 1184 279 0 0 0 chrX 78580360 78580391 -88069905 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 1184 6497 119 15 24 chrX 78580391 78580854 -88069442 - L1_Mus3 LINE L1 -38 6600 6132 1 1184 183 42 0 0 chrX 78580854 78580878 -88069418 + (TAA)n Simple_repeat Simple_repeat 2 25 0 1 1184 12649 163 129 10 chrX 78580878 78584023 -88066273 - L1_Mus3 LINE L1 -507 6131 2573 1 1184 609 253 12 59 chrX 78584026 78584282 -88066014 + RMER17C LTR ERVK 3 246 -164 1 1184 657 0 0 0 chrX 78584282 78584355 -88065941 + (TTC)n Simple_repeat Simple_repeat 3 75 0 1 1184 330 26 0 0 chrX 78584561 78584600 -88065696 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1184 26 30 0 0 chrX 78584834 78584867 -88065429 + AT_rich Low_complexity Low_complexity 1 33 0 1 1184 226 343 50 56 chrX 78585231 78585410 -88064886 + RMER15 LTR ERVL 376 553 -22 1 1184 366 381 22 0 chrX 78585597 78585736 -88064560 - B1F1 SINE Alu 0 149 8 1 1184 297 68 0 0 chrX 78585737 78585781 -88064515 + (TC)n Simple_repeat Simple_repeat 1 44 0 1 1184 284 426 29 21 chrX 78585902 78586144 -88064152 + MLT1E2 LTR MaLR 205 448 -179 1 1184 447 296 8 42 chrX 78586479 78586599 -88063697 + B1_Mur1 SINE Alu 33 148 -1 1 1184 24860 107 37 6 chrX 78587137 78590977 -88059319 + L1VL1 LINE L1 405 4368 -1515 1 1184 180 0 0 0 chrX 78590977 78590997 -88059299 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 1 1184 24860 116 37 6 chrX 78590997 78591915 -88058381 + L1VL1 LINE L1 4369 5301 -582 1 1184 3827 95 0 15 chrX 78591915 78592462 -88057834 + L1_Mus1 LINE L1 6026 6564 -3 1 1184 1602 207 132 115 chrX 78594138 78594810 -88055486 + RMER6C LTR ERVK 7 690 0 1 1184 632 281 16 11 chrX 78595524 78595711 -88054585 - Lx6 LINE L1 0 7460 7273 1 1184 1028 294 30 123 chrX 78595747 78596212 -88054084 - RLTR23 LTR ERV1 0 430 9 1 1184 1842 262 85 0 chrX 78596234 78596704 -88053592 - Lx6 LINE L1 -220 7240 6731 1 1184 388 283 9 26 chrX 78596708 78596824 -88053472 - RLTR23 LTR ERV1 0 430 317 1 1184 709 314 7 44 chrX 78597163 78597456 -88052840 - Lx6 LINE L1 -709 6751 6470 1 1184 696 177 14 21 chrX 78597469 78597613 -88052683 - Lx7 LINE L1 -1785 5911 5769 1 1184 6354 221 18 14 chrX 78597615 78599200 -88051096 - Lx7 LINE L1 -921 4959 3369 1 1184 3687 166 25 33 chrX 78599293 78600572 -88049724 + L1VL4 LINE L1 289 1556 -2003 1 1184 3102 224 50 42 chrX 78600572 78600967 -88049329 - Lx7 LINE L1 -3429 2451 2072 1 1184 228 35 0 0 chrX 78600967 78600996 -88049300 + (TGG)n Simple_repeat Simple_repeat 3 31 0 1 1184 3102 224 50 42 chrX 78600996 78601555 -88048741 - Lx7 LINE L1 -3809 2071 1489 1 1184 24977 122 10 21 chrX 78601575 78606451 -88043845 - L1_Mus1 LINE L1 0 6567 1753 1 1184 225 0 0 0 chrX 78606451 78606476 -88043820 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1184 3414 109 4 0 chrX 78606518 78607012 -88043284 - L1_Mus1 LINE L1 -6 6561 6066 1 1184 3828 76 0 0 chrX 78607013 78607592 -88042704 + L1Md_F2 LINE L1 5502 6080 -502 1 1184 3745 158 29 21 chrX 78607589 78608958 -88041338 - L1_Mus1 LINE L1 -4117 1766 387 1 1184 2506 156 9 18 chrX 78609003 78609447 -88040849 + Lx LINE L1 6215 6654 0 1 1184 1473 109 0 0 chrX 78609447 78609658 -88040638 + L1_Mm LINE L1 5291 5501 -382 1 1184 24 32 0 0 chrX 78610313 78610344 -88039952 + AT_rich Low_complexity Low_complexity 1 31 0 1 1184 6388 102 65 16 chrX 78610432 78611408 -88038888 - RLTR13D5 LTR ERVK 0 1023 1 1 1184 640 274 58 50 chrX 78611569 78611827 -88038469 - Lx9 LINE L1 -486 7158 6899 1 1184 549 30 0 0 chrX 78612095 78612162 -88038134 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 1184 32248 75 16 4 chrX 78613117 78615262 -88035034 - L1Md_F2 LINE L1 -14 6568 4384 1 1184 180 0 0 0 chrX 78615262 78615282 -88035014 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 1 1184 32248 87 8 5 chrX 78615282 78619261 -88031035 - L1Md_F2 LINE L1 -1500 4383 415 1 1184 1076 259 45 13 chrX 78619498 78619807 -88030489 + L1VL4 LINE L1 194 512 -5790 1 1184 2889 110 42 4 chrX 78619805 78620280 -88030016 + Lx3_Mus LINE L1 4681 5173 -713 1 1184 1647 36 0 0 chrX 78620282 78620475 -88029821 - B2_Mm1t SINE B2 0 193 1 1 1184 5680 131 52 10 chrX 78620481 78621440 -88028856 + Lx3_Mus LINE L1 5662 6660 -349 1 1184 15268 202 48 66 chrX 78621448 78624965 -88025331 + Lx2A LINE L1 1799 5281 -605 1 1184 985 104 7 0 chrX 78624965 78625109 -88025187 + B1_Mm SINE Alu 1 145 -2 1 1184 206 32 32 0 chrX 78625114 78625145 -88025151 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 1184 15268 172 29 17 chrX 78625145 78626850 -88023446 + Lx2A LINE L1 5294 6968 -40 1 1184 11064 183 14 28 chrX 78626867 78630419 -88019877 + Lx2 LINE L1 3489 6997 0 1 1184 3533 163 41 61 chrX 78630923 78631999 -88018297 + RLTR13D1 LTR ERVK 1 1023 0 1 1184 544 303 78 80 chrX 78632069 78632493 -88017803 + RLTR6-int LTR ERV1 1284 1706 -6072 1 1184 13095 75 5 0 chrX 78632493 78634261 -88016035 + L1Md_F2 LINE L1 3803 5579 -304 1 1184 7536 73 1 0 chrX 78634266 78635247 -88015049 + L1Md_F2 LINE L1 5587 6568 -14 1 1184 764 364 36 33 chrX 78635252 78635774 -88014522 + RLTR6-int LTR ERV1 2933 3456 -4322 1 1184 12778 197 61 8 chrX 78635777 78638039 -88012257 - L1_Mur1 LINE L1 -541 5342 2792 1 1184 378 74 0 0 chrX 78638039 78638093 -88012203 + (TTG)n Simple_repeat Simple_repeat 1 54 0 1 1184 12778 194 53 8 chrX 78638093 78639177 -88011119 - L1_Mur1 LINE L1 -3092 2794 1664 1 1184 264 310 55 55 chrX 78639228 78639392 -88010904 - IAP-d-int LTR ERVK -2701 3780 3617 1 1184 2588 333 53 58 chrX 78639400 78642141 -88008155 - IAP-d-int LTR ERVK -3114 3428 700 1 1184 25 95 0 0 chrX 78642390 78642464 -88007832 + AT_rich Low_complexity Low_complexity 1 74 0 1 1184 22 35 0 0 chrX 78642784 78642813 -88007483 + AT_rich Low_complexity Low_complexity 1 29 0 1 1185 578 77 154 0 chrX 78643278 78643395 -88006901 - L1_Mus3 LINE L1 -6 6632 6498 1 1185 336 87 0 0 chrX 78643395 78643441 -88006855 + L1_Mus3 LINE L1 6206 6251 -387 1 1185 750 23 0 0 chrX 78643441 78643529 -88006767 + (TA)n Simple_repeat Simple_repeat 2 89 0 1 1185 606 28 0 0 chrX 78643623 78643695 -88006601 + (TC)n Simple_repeat Simple_repeat 1 72 0 1 1185 327 25 0 0 chrX 78643695 78643734 -88006562 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1185 29374 157 88 18 chrX 78644132 78645195 -88005101 + Lx3_Mus LINE L1 225 1616 -4270 1 1185 180 0 0 0 chrX 78645195 78645215 -88005081 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1185 29374 110 15 18 chrX 78645215 78646985 -88003311 + Lx3_Mus LINE L1 1617 3341 -2545 1 1185 180 0 0 0 chrX 78646985 78647005 -88003291 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1185 29374 117 23 14 chrX 78647005 78650584 -87999712 + Lx3_Mus LINE L1 3342 6992 -17 1 1185 23 33 0 0 chrX 78650894 78650924 -87999372 + AT_rich Low_complexity Low_complexity 1 30 0 1 1185 2518 239 129 37 chrX 78651376 78652450 -87997846 + RMER12B LTR ERVK 2 1220 -184 1 1185 455 239 18 9 chrX 78652478 78652588 -87997708 + RLTR21 LTR ERVK 1462 1572 0 1 1185 531 178 0 0 chrX 78652652 78652753 -87997543 + (TA)n Simple_repeat Simple_repeat 2 102 0 1 1185 779 318 81 53 chrX 78652763 78652854 -87997442 - Lx8 LINE L1 -1284 6189 6112 1 1185 3249 48 2 2 chrX 78652854 78653250 -87997046 + MTA_Mm LTR MaLR 1 396 0 1 1185 796 277 94 25 chrX 78653250 78653824 -87996472 - Lx8 LINE L1 -1362 6111 5530 1 1185 555 339 81 50 chrX 78654654 78654952 -87995344 + RLTR18 LTR ERVK 1 307 -309 1 1185 2743 99 0 13 chrX 78655142 78655531 -87994765 - MTB_Mm LTR MaLR 0 407 24 1 1185 453 19 0 0 chrX 78655531 78655585 -87994711 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1185 281 328 62 55 chrX 78655588 78655733 -87994563 + RLTR18 LTR ERVK 328 473 -39 1 1185 503 139 0 98 chrX 78657068 78657180 -87993116 - L1_Mur2 LINE L1 -3376 2501 2401 1 1185 2751 244 67 23 chrX 78657198 78657776 -87992520 + MTC-int LTR MaLR 484 1089 -169 1 1185 360 0 0 0 chrX 78657776 78657816 -87992480 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 1185 2751 244 67 23 chrX 78657816 78657979 -87992317 + MTC-int LTR MaLR 1090 1257 -1 1 1185 715 274 39 25 chrX 78657981 78658274 -87992022 + MTC LTR MaLR 3 310 -97 1 1185 243 161 17 35 chrX 78658250 78658308 -87991988 + MTD LTR MaLR 362 418 -1 1 1185 38536 5 0 0 chrX 78658308 78663874 -87986422 + L1Md_A LINE L1 21 5586 -297 1 1185 9034 2 0 0 chrX 78663874 78664870 -87985426 + L1Md_A LINE L1 5587 6582 0 1 1185 267 335 65 35 chrX 78666830 78667031 -87983265 - B3 SINE B2 -7 209 3 1 1185 280 280 0 36 chrX 78667482 78667593 -87982703 + L1P5 LINE L1 5347 5453 -703 1 1185 22 0 0 0 chrX 78669082 78669104 -87981192 + AT_rich Low_complexity Low_complexity 1 22 0 1 1185 7050 118 5 1 chrX 78669417 78670456 -87979840 + L1_Mus3 LINE L1 5587 6629 -9 1 1185 22 0 0 0 chrX 78670559 78670581 -87979715 + AT_rich Low_complexity Low_complexity 1 22 0 1 1185 494 274 48 0 chrX 78671729 78671875 -87978421 + Lx6 LINE L1 7090 7242 -218 1 1185 321 47 0 0 chrX 78671881 78671924 -87978372 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 1185 649 105 0 0 chrX 78671931 78672026 -87978270 - B2_Mm2 SINE B2 -99 96 2 1 1185 617 277 40 20 chrX 78672030 78672229 -87978067 + Lx6 LINE L1 7254 7456 -4 1 1185 7651 94 17 0 chrX 78672420 78674186 -87976110 + L1_Mus1 LINE L1 4763 6567 0 1 1185 21 0 0 0 chrX 78674335 78674356 -87975940 + AT_rich Low_complexity Low_complexity 1 21 0 1 1185 2160 144 19 0 chrX 78674567 78674928 -87975368 + L1_Mus4 LINE L1 6269 6636 0 1 1185 2384 125 44 0 chrX 78675721 78676104 -87974192 + MTB LTR MaLR 1 400 0 1 1185 353 103 147 0 chrX 78676104 78676172 -87974124 + MTB-int LTR MaLR 1 78 -1020 1 1185 4960 166 104 19 chrX 78676283 78677360 -87972936 + MTB-int LTR MaLR 91 1258 0 1 1185 2013 138 123 6 chrX 78677360 78677718 -87972578 + MTB LTR MaLR 1 400 0 1 1185 5405 185 40 31 chrX 78677718 78678936 -87971360 + L1_Mur2 LINE L1 1985 3213 -2664 1 1185 1167 230 58 50 chrX 78678936 78679312 -87970984 + RMER17C LTR ERVK 1 379 -31 1 1185 486 0 0 0 chrX 78679315 78679369 -87970927 + (TTTC)n Simple_repeat Simple_repeat 2 55 0 1 1185 2049 170 8 58 chrX 78679383 78679865 -87970431 + L1_Mur2 LINE L1 3208 3665 -2212 1 1185 36018 39 3 5 chrX 78679865 78683779 -87966517 + L1Md_T LINE L1 422 4343 -1540 1 1185 3944 40 0 6 chrX 78683779 78684260 -87966036 + L1Md_T LINE L1 6105 6582 0 1 1185 36018 30 1 5 chrX 78684260 78685524 -87964772 + L1Md_T LINE L1 4344 5586 -297 1 1185 8268 40 1 0 chrX 78685524 78686517 -87963779 + L1Md_T LINE L1 5587 6580 -2 1 1185 6375 201 30 6 chrX 78686553 78687966 -87962330 + L1_Mur2 LINE L1 3649 5096 -781 1 1185 1316 211 58 36 chrX 78687961 78688290 -87962006 + Lx2 LINE L1 6662 6997 0 1 1185 746 152 6 33 chrX 78688318 78688501 -87961795 + GA-rich Low_complexity Low_complexity 1 178 0 1 1185 234 235 39 0 chrX 78688503 78688554 -87961742 + polypurine Low_complexity Low_complexity 1 53 0 1 1185 589 180 8 8 chrX 78688554 78688683 -87961613 + G-rich Low_complexity Low_complexity 3 131 0 2 1185 271 310 0 14 chrX 78688716 78688788 -87961508 + polypurine Low_complexity Low_complexity 3 73 0 2 1185 249 247 76 0 chrX 78688788 78688946 -87961350 + GA-rich Low_complexity Low_complexity 1 170 0 2 1185 685 139 63 0 chrX 78688991 78689149 -87961147 + GA-rich Low_complexity Low_complexity 3 170 0 2 1185 2580 248 55 20 chrX 78689153 78689828 -87960468 + Lx5 LINE L1 6369 7048 -2 2 1185 21 71 0 0 chrX 78690282 78690324 -87959972 + AT_rich Low_complexity Low_complexity 1 42 0 2 1185 1834 70 0 12 chrX 78690515 78690761 -87959535 + L1Md_F2 LINE L1 6328 6570 -12 2 1185 4665 83 23 8 chrX 78690951 78691606 -87958690 + L1Md_F2 LINE L1 5918 6582 0 2 1185 557 273 128 14 chrX 78691631 78691675 -87958621 + L1M2 LINE L1 2975 3020 -3123 2 1185 2518 106 5 5 chrX 78691675 78692045 -87958251 + L1_Mus2 LINE L1 6197 6566 0 2 1185 557 273 128 14 chrX 78692045 78692413 -87957883 + L1M2 LINE L1 3021 3433 -2710 2 1185 663 248 6 0 chrX 78692465 78692622 -87957674 + L1_Mur2 LINE L1 5005 5162 -715 2 1185 1699 201 31 13 chrX 78692753 78693137 -87957159 + L1_Mur2 LINE L1 5172 5562 -315 2 1185 361 320 57 8 chrX 78693278 78693524 -87956772 + L1M2 LINE L1 3706 3963 -2177 2 1185 263 108 0 0 chrX 78693526 78693563 -87956733 - Lx LINE L1 -547 6107 6071 2 1185 1919 194 73 9 chrX 78693560 78693986 -87956310 + Lx LINE L1 6201 6653 -1 2 1185 4902 132 9 10 chrX 78694027 78694386 -87955910 - L1_Mm LINE L1 -796 5087 4731 2 1185 684 0 0 0 chrX 78694386 78694462 -87955834 + (TTTTG)n Simple_repeat Simple_repeat 2 77 0 2 1185 4902 132 9 10 chrX 78694462 78694904 -87955392 - L1_Mm LINE L1 -1153 4730 4287 2 1185 5168 114 61 3 chrX 78694906 78696373 -87953923 + L1_Mus3 LINE L1 5076 6626 -12 2 1185 325 329 25 12 chrX 78696627 78696787 -87953509 + L1M4 LINE L1 4330 4491 -1655 2 1185 309 51 0 0 chrX 78697597 78697636 -87952660 + (TAAAA)n Simple_repeat Simple_repeat 1 39 0 2 1185 252 86 0 0 chrX 78697808 78697843 -87952453 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 1185 198 143 0 0 chrX 78697847 78697882 -87952414 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 2 1185 832 248 123 20 chrX 78698101 78698451 -87951845 + Lx9 LINE L1 7244 7629 -15 2 1185 2174 127 3 15 chrX 78699378 78699721 -87950575 + Lx LINE L1 6316 6654 0 2 1185 329 109 0 18 chrX 78699727 78699783 -87950513 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 2 1185 6768 217 47 75 chrX 78700388 78702676 -87947620 + L1_Mur3 LINE L1 1171 3392 -2488 2 1185 579 186 93 0 chrX 78703599 78703717 -87946579 - B2_Mm2 SINE B2 -66 129 1 2 1185 24 32 0 0 chrX 78704012 78704043 -87946253 + AT_rich Low_complexity Low_complexity 1 31 0 2 1185 584 288 0 7 chrX 78704049 78704196 -87946100 - B1_Mur3 SINE Alu -1 148 3 2 1185 263 294 73 0 chrX 78704209 78704277 -87946019 - ID4_ SINE ID 0 83 11 2 1185 32 26 0 0 chrX 78704277 78704316 -87945980 + AT_rich Low_complexity Low_complexity 1 39 0 2 1185 198 0 0 0 chrX 78704765 78704787 -87945509 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 1185 252 0 0 0 chrX 78705050 78705078 -87945218 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1185 454 296 49 25 chrX 78705347 78705510 -87944786 - B3 SINE B2 -2 214 48 2 1185 194 91 0 29 chrX 78706608 78706642 -87943654 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 2 1185 442 301 26 0 chrX 78706646 78706759 -87943537 - PB1D9 SINE Alu 0 120 5 2 1185 25 0 0 28 chrX 78706969 78706991 -87943305 + AT_rich Low_complexity Low_complexity 1 22 0 2 1185 1485 21 0 16 chrX 78706991 78707182 -87943114 + L1Md_F2 LINE L1 6387 6574 -8 2 1185 25 0 0 28 chrX 78707182 78707195 -87943101 + AT_rich Low_complexity Low_complexity 1 13 0 2 1185 899 105 0 43 chrX 78707310 78707449 -87942847 + B1_Mus2 SINE Alu 2 134 -13 2 1185 270 0 0 0 chrX 78707449 78707479 -87942817 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 2 1185 497 16 0 16 chrX 78707481 78707544 -87942752 + (GAAA)n Simple_repeat Simple_repeat 3 64 0 2 1185 276 338 55 63 chrX 78707605 78707795 -87942501 - MER31B LTR ERV1 -229 256 86 2 1185 464 304 8 0 chrX 78707856 78707981 -87942315 + MER44D DNA MER2_type 39 164 -541 2 1185 318 106 0 0 chrX 78708082 78708129 -87942167 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 1185 480 319 82 16 chrX 78708173 78708418 -87941878 + MER44D DNA MER2_type 350 610 -95 2 1185 253 315 135 42 chrX 78708428 78708524 -87941772 + MER2 DNA MER2_type 7 111 -234 2 1185 191 61 0 29 chrX 78709146 78709180 -87941116 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2 1185 459 0 0 0 chrX 78709692 78709743 -87940553 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 2 1185 725 187 13 13 chrX 78710097 78710254 -87940042 + Lx3B LINE L1 6805 6961 -12 2 1185 25 0 0 0 chrX 78710411 78710436 -87939860 + AT_rich Low_complexity Low_complexity 1 25 0 2 1185 253 294 79 63 chrX 78710731 78710858 -87939438 + MLT1A1 LTR MaLR 268 396 -12 2 1185 225 0 0 0 chrX 78711645 78711670 -87938626 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1185 297 0 0 0 chrX 78712161 78712194 -87938102 + (T)n Simple_repeat Simple_repeat 1 33 0 2 1185 255 356 43 9 chrX 78712216 78712332 -87937964 - MLT1C LTR MaLR -95 372 253 2 1185 2932 74 18 2 chrX 78712336 78712730 -87937566 + MTB LTR MaLR 1 400 0 2 1185 880 47 0 0 chrX 78712743 78712849 -87937447 + MURVY-LTR LTR ERV1 1 106 -413 2 1185 5490 289 22 19 chrX 78712849 78714991 -87935305 + RLTR6-int LTR ERV1 1976 4597 -3181 2 1185 613 238 59 27 chrX 78714988 78715208 -87935088 + MMERGLN-int LTR ERV1 5260 5486 -2070 2 1185 298 87 0 14 chrX 78715461 78715518 -87934778 + RLTR6-int LTR ERV1 7737 7778 0 2 1185 3685 58 72 0 chrX 78715518 78716002 -87934294 + MURVY-LTR LTR ERV1 1 519 0 2 1185 21 36 0 0 chrX 78716923 78716951 -87933345 + AT_rich Low_complexity Low_complexity 1 28 0 2 1185 225 267 97 79 chrX 78717521 78717635 -87932661 - Charlie10 DNA MER1_type -1424 1398 1283 2 1185 291 54 0 0 chrX 78718075 78718112 -87932184 + (T)n Simple_repeat Simple_repeat 1 37 0 2 1185 2943 79 12 14 chrX 78718433 78718855 -87931441 + BGLII LTR ERVK 1 421 0 2 1185 246 105 0 0 chrX 78718906 78718944 -87931352 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 1185 1750 211 40 7 chrX 78719467 78720263 -87930033 + L1_Mur2 LINE L1 901 1725 -4152 2 1185 2873 104 0 5 chrX 78720253 78720670 -87929626 - Lx3_Mus LINE L1 -1008 6001 5587 2 1185 6381 102 24 8 chrX 78720684 78721650 -87928646 + Lx3_Mus LINE L1 6029 7009 0 2 1185 6224 214 28 22 chrX 78721666 78722023 -87928273 + L1_Mur2 LINE L1 1704 2056 -3821 2 1185 333 100 0 0 chrX 78722023 78722073 -87928223 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1185 10516 227 71 40 chrX 78722073 78725230 -87925066 + L1_Mur2 LINE L1 2057 5328 -549 2 1185 718 251 27 31 chrX 78725221 78725441 -87924855 + Lx5 LINE L1 6118 6342 -716 2 1185 450 0 0 0 chrX 78725548 78725598 -87924698 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1185 5301 221 43 8 chrX 78726243 78727099 -87923197 + L1_Mur3 LINE L1 4129 5014 -866 2 1185 951 112 0 0 chrX 78727099 78727242 -87923054 + (GGAA)n Simple_repeat Simple_repeat 3 145 0 2 1185 5301 221 43 8 chrX 78727242 78727717 -87922579 + L1_Mur3 LINE L1 5015 5508 -372 2 1185 532 188 46 15 chrX 78727868 78727992 -87922304 - Lx LINE L1 -96 6962 6775 2 1185 3671 66 17 2 chrX 78728021 78728504 -87921792 - L1_Mus1 LINE L1 0 6567 6078 2 1185 1388 35 0 0 chrX 78728504 78728675 -87921621 + L1_Mus1 LINE L1 5897 6067 -500 2 1185 5676 138 72 35 chrX 78730264 78730343 -87919953 - Lx LINE L1 -7 6647 6571 2 1185 3667 53 14 62 chrX 78730343 78730861 -87919435 + MT2_Mm LTR ERVL 1 493 0 2 1185 5676 141 58 38 chrX 78730861 78732103 -87918193 - Lx LINE L1 -84 6570 5288 2 1185 8028 46 8 0 chrX 78732109 78733717 -87916579 - L1Md_F3 LINE L1 -14 6570 4951 2 1185 349 245 42 11 chrX 78733815 78733910 -87916386 - MTD LTR MaLR -286 133 36 2 1185 3644 290 63 33 chrX 78734523 78735116 -87915180 - Lx5 LINE L1 -18 7032 6447 2 1185 3387 176 79 11 chrX 78735116 78735824 -87914472 - RMER6A LTR ERVK 0 756 1 2 1185 4790 256 57 22 chrX 78735824 78736927 -87913369 - Lx5 LINE L1 -604 6446 5289 2 1185 960 139 24 0 chrX 78736927 78737093 -87913203 - Lx LINE L1 -7 6647 6478 2 1185 4790 227 40 13 chrX 78737093 78737618 -87912678 - Lx5 LINE L1 -592 5288 4730 2 1185 204 40 0 0 chrX 78737618 78737643 -87912653 + (TTA)n Simple_repeat Simple_repeat 3 27 0 2 1185 4790 227 40 13 chrX 78737643 78737717 -87912579 - Lx5 LINE L1 -1151 4729 4649 2 1185 2551 122 27 30 chrX 78737813 78738254 -87912042 + Lx2 LINE L1 6557 6996 -1 2 1185 441 337 38 52 chrX 78739195 78739408 -87910888 + ID_B1 SINE B4 3 212 -12 2 1185 793 195 50 6 chrX 78739503 78739663 -87910633 - URR1B DNA MER1_type 0 225 59 2 1185 183 80 0 0 chrX 78740394 78740419 -87909877 + (CATA)n Simple_repeat Simple_repeat 2 26 0 2 1185 476 333 29 43 chrX 78741169 78741376 -87908920 - MER92B LTR ERV1 -432 204 1 2 1185 218 32 32 0 chrX 78742839 78742870 -87907426 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1185 709 320 14 21 chrX 78742946 78743230 -87907066 - B4A SINE B4 -8 284 3 2 1185 333 0 0 0 chrX 78743768 78743805 -87906491 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1185 576 336 52 47 chrX 78743825 78744209 -87906087 - Lx8 LINE L1 -172 7301 6916 2 1185 240 294 145 14 chrX 78744312 78744450 -87905846 + MIR SINE MIR 35 190 -72 2 1185 2035 223 62 37 chrX 78744464 78745009 -87905287 - RLTR31_Mm LTR ERVK 0 561 3 2 1185 28 29 0 0 chrX 78745281 78745316 -87904980 + AT_rich Low_complexity Low_complexity 1 35 0 2 1185 4199 111 2 2 chrX 78745670 78746277 -87904019 - L1_Mus2 LINE L1 -1 6565 5959 2 1185 6429 99 1 12 chrX 78746277 78747290 -87903006 + L1_Mus2 LINE L1 4939 5945 -621 2 1185 23 68 0 0 chrX 78747335 78747379 -87902917 + AT_rich Low_complexity Low_complexity 1 44 0 2 1185 21 0 0 0 chrX 78747791 78747812 -87902484 + AT_rich Low_complexity Low_complexity 1 21 0 2 1185 1271 69 63 0 chrX 78748168 78748342 -87901954 - B2_Mm1t SINE B2 -8 185 1 2 1185 219 320 0 0 chrX 78748401 78748476 -87901820 + A-rich Low_complexity Low_complexity 1 75 0 2 1185 1745 294 33 20 chrX 78748851 78749362 -87900934 - Lx6 LINE L1 -1 7459 6942 2 1185 3917 239 15 26 chrX 78749392 78749839 -87900457 - Lx5 LINE L1 -4 7046 6602 2 1185 894 107 21 28 chrX 78749839 78749983 -87900313 - B1_Mus1 SINE Alu -1 147 5 2 1185 3917 239 15 26 chrX 78749983 78750446 -87899850 - Lx5 LINE L1 -449 6601 6146 2 1185 3695 201 49 24 chrX 78750446 78751238 -87899058 + RMER13A LTR ERVK 1 860 0 2 1185 396 194 82 0 chrX 78751284 78751382 -87898914 - Lx5 LINE L1 -988 6062 5957 2 1185 197 0 71 0 chrX 78751557 78751585 -87898711 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 2 1185 420 37 0 0 chrX 78751597 78751651 -87898645 + (TATG)n Simple_repeat Simple_repeat 2 55 0 2 1185 198 103 0 0 chrX 78751989 78752018 -87898278 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2 1185 480 186 0 0 chrX 78752090 78752203 -87898093 + (TG)n Simple_repeat Simple_repeat 2 114 0 3 1185 359 142 12 5 chrX 78752376 78752461 -87897835 + ORR1A2 LTR MaLR 34 137 -241 3 1185 6584 160 27 9 chrX 78752453 78753670 -87896626 + ORR1A2-int LTR MaLR 725 1963 0 3 1185 1818 173 19 0 chrX 78753671 78753983 -87896313 + ORR1A2 LTR MaLR 2 319 -8 3 1185 1697 129 128 62 chrX 78754428 78754817 -87895479 - RLTR9F LTR ERVK 0 415 1 3 1185 2032 59 0 0 chrX 78755195 78755449 -87894847 + L1_Mus1 LINE L1 5913 6166 -401 3 1185 1111 147 0 0 chrX 78755440 78755638 -87894658 - MusHAL1 LINE L1 -2292 420 223 3 1185 621 241 126 0 chrX 78755642 78755841 -87894455 + MTD LTR MaLR 196 419 0 3 1185 262 358 8 8 chrX 78755983 78756104 -87894192 + Lx8 LINE L1 6911 7031 -442 3 1185 312 282 61 0 chrX 78756160 78756291 -87894005 + Lx9 LINE L1 7374 7512 -132 3 1185 29 0 0 0 chrX 78756377 78756406 -87893890 + AT_rich Low_complexity Low_complexity 1 29 0 3 1185 32 0 0 0 chrX 78756674 78756706 -87893590 + AT_rich Low_complexity Low_complexity 1 32 0 3 1185 1010 291 78 75 chrX 78757672 78758078 -87892218 - MTD LTR MaLR -18 401 14 3 1185 2837 172 42 9 chrX 78758237 78758807 -87891489 - L1_Mur1 LINE L1 -1252 4625 4037 3 1185 9716 186 29 14 chrX 78758809 78761295 -87889001 - L1_Mur1 LINE L1 -2534 3352 830 3 1185 5134 164 72 9 chrX 78761375 78761483 -87888813 + Lx3A LINE L1 4635 4741 -1145 3 1185 284 0 28 0 chrX 78761483 78761519 -87888777 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 3 1185 5134 164 64 8 chrX 78761519 78762443 -87887853 + Lx3A LINE L1 4742 5728 -1253 3 1185 312 191 0 0 chrX 78762447 78762515 -87887781 + Lx3A LINE L1 6110 6177 -799 3 1185 1677 167 73 6 chrX 78762516 78762860 -87887436 - RLTR9A LTR ERVK 0 368 2 3 1185 26 0 0 0 chrX 78762866 78762892 -87887404 + AT_rich Low_complexity Low_complexity 1 26 0 3 1185 256 200 0 0 chrX 78762892 78762937 -87887359 - ETnERV2-int LTR ERVK -31 7375 7331 3 1185 17767 91 8 7 chrX 78763292 78765858 -87884438 - L1Md_F2 LINE L1 -1141 4742 2173 3 1185 5935 96 12 0 chrX 78765861 78766354 -87883942 + L1Md_F2 LINE L1 4739 5232 -651 3 1185 191 0 75 25 chrX 78766354 78766394 -87883902 + (TATAA)n Simple_repeat Simple_repeat 3 44 0 3 1185 5935 96 12 0 chrX 78766394 78766738 -87883558 + L1Md_F2 LINE L1 5233 5584 -299 3 1185 6962 100 0 17 chrX 78766738 78767739 -87882557 + L1Md_F2 LINE L1 5587 6570 -12 3 1185 181 109 43 0 chrX 78767870 78767916 -87882380 + A-rich Low_complexity Low_complexity 2 49 0 3 1185 8201 221 9 12 chrX 78767927 78769616 -87880680 - ETnERV2-int LTR ERVK -1236 6170 4486 3 1185 582 215 0 0 chrX 78769616 78769746 -87880550 + (TATG)n Simple_repeat Simple_repeat 2 131 0 3 1185 805 214 0 17 chrX 78769812 78769988 -87880308 - ETnERV2-int LTR ERVK -3025 4381 4209 3 1185 570 50 9 47 chrX 78770036 78770142 -87880154 - Lx LINE L1 -6 6648 6547 3 1185 337 98 0 0 chrX 78770281 78770332 -87879964 - L1_Mus2 LINE L1 0 6566 6516 3 1185 953 38 8 0 chrX 78770364 78770495 -87879801 - L1Md_T LINE L1 -1 6581 6450 3 1185 4795 149 29 4 chrX 78770547 78771350 -87878946 - Lx LINE L1 -5 6649 5827 3 1185 12226 69 7 1 chrX 78771357 78773712 -87876584 - L1Md_F2 LINE L1 0 6582 4214 3 148 10874 63 2 1 chrX 78773711 78775804 -87874492 - L1Md_F2 LINE L1 -12 6570 4475 3 1186 3656 111 11 0 chrX 78775795 78776354 -87873942 - L1Md_F2 LINE L1 -2497 3386 2822 3 1186 389 94 0 0 chrX 78776351 78776404 -87873892 - L1Md_F2 LINE L1 -6334 282 230 3 1186 19856 114 194 8 chrX 78776376 78778818 -87871478 + L1Md_F2 LINE L1 442 3059 -2824 3 1186 552 158 61 0 chrX 78778818 78778932 -87871364 - L1Md_F2 LINE L1 -19 6563 6443 3 1186 19856 93 259 1 chrX 78778932 78780716 -87869580 + L1Md_F2 LINE L1 3060 5584 -299 3 1186 6862 110 1 7 chrX 78780717 78781717 -87868579 + L1Md_F2 LINE L1 5587 6580 -2 3 1186 3121 192 14 3 chrX 78781717 78782349 -87867947 - L1_Mm LINE L1 -1012 4871 4233 3 1186 396 40 0 0 chrX 78782349 78782399 -87867897 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1186 26 30 0 0 chrX 78782403 78782436 -87867860 + AT_rich Low_complexity Low_complexity 1 33 0 3 1186 2072 88 149 12 chrX 78782523 78782866 -87867430 + RLTR10 LTR ERVK 1 390 0 3 1186 2278 216 59 2 chrX 78783212 78783689 -87866607 - Lx3C LINE L1 -2 6974 6471 3 1186 1377 192 17 114 chrX 78783686 78784168 -87866128 - L1_Mur3 LINE L1 -477 5403 4969 3 1186 899 294 160 14 chrX 78784164 78784734 -87865562 - L1_Mur3 LINE L1 -6574 1154 502 3 1186 400 256 19 80 chrX 78784734 78784997 -87865299 - Lx7 LINE L1 -177 7519 7273 3 1186 306 73 0 0 chrX 78785087 78785128 -87865168 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1186 541 268 77 52 chrX 78785159 78785431 -87864865 - Lx7 LINE L1 -1462 6234 5956 3 1186 1564 341 28 20 chrX 78786064 78786812 -87863484 + Lx9 LINE L1 6526 7279 -365 3 1186 1060 292 48 63 chrX 78787297 78787710 -87862586 - MTD LTR MaLR 0 419 13 3 1186 774 300 19 46 chrX 78787845 78788107 -87862189 - RLTR20B3 LTR ERVK 0 528 274 3 1186 1246 229 32 71 chrX 78788107 78788516 -87861780 - RLTR9C LTR ERVK 0 393 1 3 1186 488 97 0 0 chrX 78788520 78788592 -87861704 - ETnERV2-int LTR ERVK -4 7402 7331 3 1186 15405 121 14 29 chrX 78788807 78789975 -87860321 - ETnERV2-int LTR ERVK -984 6422 5361 3 1186 2787 58 0 3 chrX 78789975 78790321 -87859975 - IAPLTR4 LTR ERVK 0 345 1 3 1186 15405 225 44 33 chrX 78790321 78793239 -87857057 - ETnERV2-int LTR ERVK -2046 5360 1597 3 1186 9103 187 10 11 chrX 78793285 78794953 -87855343 - ETnERV-int LTR ERVK -1647 1667 2 3 1186 520 259 52 60 chrX 78795041 78795287 -87855009 - RLTR20B3 LTR ERVK -326 251 9 3 1186 351 269 18 29 chrX 78795369 78795575 -87854721 - L1M3 LINE L1 -492 5691 5489 3 1186 1006 73 7 28 chrX 78796319 78796460 -87853836 - B1_Mm SINE Alu -9 138 1 3 1186 524 347 94 22 chrX 78796961 78797244 -87853052 + L1_Mur3 LINE L1 192 486 -7226 3 1186 495 0 0 0 chrX 78797244 78797299 -87852997 + (TC)n Simple_repeat Simple_repeat 2 56 0 3 1186 524 347 94 22 chrX 78797299 78797558 -87852738 + L1_Mur3 LINE L1 487 772 -6940 3 1186 7078 196 54 16 chrX 78797589 78799422 -87850874 + Lx4A LINE L1 5158 7056 -2 3 1186 619 210 34 21 chrX 78799469 78799648 -87850648 + Lx7 LINE L1 5782 5962 -1088 3 1186 350 129 29 0 chrX 78799669 78799739 -87850557 + (CATA)n Simple_repeat Simple_repeat 1 72 0 3 1186 431 283 59 65 chrX 78799739 78799992 -87850304 + Lx7 LINE L1 5922 6180 -1516 3 1186 282 29 0 0 chrX 78799992 78800027 -87850269 + (TATG)n Simple_repeat Simple_repeat 2 36 0 3 1186 431 283 59 65 chrX 78800027 78800110 -87850186 + Lx7 LINE L1 6181 6256 -1440 3 1186 279 169 0 0 chrX 78800116 78800175 -87850121 + T-rich Low_complexity Low_complexity 25 83 0 3 1186 1031 122 0 0 chrX 78800175 78800322 -87849974 - B1_Mus2 SINE Alu 0 147 1 3 1186 279 169 0 0 chrX 78800322 78800345 -87849951 + T-rich Low_complexity Low_complexity 2 24 0 3 1186 1552 211 3 0 chrX 78800875 78801217 -87849079 - Lx LINE L1 -7 6647 6305 3 1186 1151 260 13 26 chrX 78801224 78801528 -87848768 + Lx7 LINE L1 6249 6548 -1148 3 1186 1876 283 55 65 chrX 78801516 78802387 -87847909 + Lx7 LINE L1 6817 7678 -18 3 1186 31 26 0 0 chrX 78802397 78802435 -87847861 + AT_rich Low_complexity Low_complexity 1 38 0 3 1186 608 314 29 17 chrX 78802615 78802787 -87847509 - B3 SINE B2 -41 175 2 3 1186 384 350 55 17 chrX 78802787 78803025 -87847271 - Lx9 LINE L1 -190 7454 7208 3 1186 225 0 0 0 chrX 78803308 78803333 -87846963 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 1186 306 167 0 0 chrX 78803336 78803396 -87846900 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1186 189 0 0 0 chrX 78803657 78803678 -87846618 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1186 21 36 0 0 chrX 78804293 78804321 -87845975 + AT_rich Low_complexity Low_complexity 1 28 0 3 1186 200 200 0 0 chrX 78805143 78805183 -87845113 + (TATAG)n Simple_repeat Simple_repeat 3 42 0 3 1186 22 70 0 0 chrX 78805376 78805419 -87844877 + AT_rich Low_complexity Low_complexity 1 43 0 3 1186 23 68 0 0 chrX 78805720 78805764 -87844532 + AT_rich Low_complexity Low_complexity 1 44 0 3 1186 7421 96 2 1 chrX 78805769 78807052 -87843244 - L1_Mus1 LINE L1 0 6654 5288 3 1186 32277 95 3 3 chrX 78807084 78812481 -87837815 - L1Md_F2 LINE L1 -10 6572 1174 3 1186 33714 30 0 0 chrX 78812492 78817292 -87833004 - L1Md_T LINE L1 0 6585 1786 3 1186 6001 24 3 3 chrX 78817276 78818346 -87831950 - L1Md_T LINE L1 -5814 708 2 3 1186 6102 84 1 2 chrX 78818345 78819171 -87831125 - L1Md_F LINE L1 -5426 1093 269 3 1186 24228 129 5 34 chrX 78819162 78820318 -87829978 - L1Md_F LINE L1 -571 5312 4157 3 1186 3382 30 2 0 chrX 78820318 78820713 -87829583 + MTA_Mm LTR MaLR 1 396 0 3 1186 24228 153 14 62 chrX 78820713 78824763 -87825533 - L1Md_F LINE L1 -1727 4156 349 3 1186 366 324 71 29 chrX 78824799 78824939 -87825357 - RSINE1 SINE B4 -7 158 13 3 1186 4094 255 41 14 chrX 78824953 78826002 -87824294 + Lx5 LINE L1 5972 7048 -2 3 1186 205 29 59 0 chrX 78826228 78826262 -87824034 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 3 1186 534 245 61 30 chrX 78826275 78826439 -87823857 - Lx6 LINE L1 -733 6727 6559 3 1186 712 236 0 0 chrX 78826463 78826611 -87823685 + Lx6 LINE L1 6740 6887 -573 3 1186 1050 276 49 33 chrX 78826624 78826991 -87823305 + Lx6 LINE L1 7088 7460 0 3 1186 4339 206 41 1 chrX 78826980 78827946 -87822350 + L1_Mur2 LINE L1 4852 5856 -21 3 1186 3747 201 92 21 chrX 78827950 78828746 -87821550 + RMER13B LTR ERVK 24 875 -33 3 1186 204 214 0 0 chrX 78828921 78828977 -87821319 + (TTA)n Simple_repeat Simple_repeat 1 56 0 3 1186 345 316 35 9 chrX 78830236 78830351 -87819945 - RSINE1 SINE B4 -44 121 4 3 1186 36 0 0 0 chrX 78830479 78830515 -87819781 + AT_rich Low_complexity Low_complexity 1 36 0 3 1186 1385 214 56 24 chrX 78830815 78831246 -87819050 + RMER17C LTR ERVK 19 439 -519 3 1186 585 99 63 0 chrX 78831552 78831689 -87818607 - L1_Mus4 LINE L1 0 6636 6509 3 1186 268 304 154 40 chrX 78831760 78832058 -87818238 + Lx8 LINE L1 7109 7440 -33 3 1186 27 62 0 0 chrX 78832154 78832202 -87818094 + AT_rich Low_complexity Low_complexity 1 48 0 3 1186 3767 275 36 6 chrX 78832280 78833254 -87817042 - Lx6 LINE L1 -4 7456 6454 3 1186 21 0 0 0 chrX 78834617 78834638 -87815658 + AT_rich Low_complexity Low_complexity 1 21 0 3 1186 293 362 66 42 chrX 78834682 78834729 -87815567 + B4 SINE B4 43 213 -79 3 1186 295 336 100 8 chrX 78834729 78834849 -87815447 + B1F SINE Alu 6 136 -13 3 1186 312 27 0 0 chrX 78834854 78834891 -87815405 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 1186 1920 168 50 0 chrX 78835579 78835936 -87814360 - Lx5 LINE L1 -923 4954 4580 3 1186 4621 209 85 16 chrX 78835943 78837762 -87812534 + Lx5 LINE L1 4962 6909 -141 3 1186 303 49 0 0 chrX 78837762 78837803 -87812493 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1186 4621 228 39 22 chrX 78837803 78837836 -87812460 + Lx5 LINE L1 6910 6941 -109 3 1186 22 0 0 0 chrX 78838100 78838122 -87812174 + AT_rich Low_complexity Low_complexity 1 22 0 3 1186 1138 58 0 43 chrX 78838648 78838809 -87811487 - L1_Mus1 LINE L1 0 6567 6414 3 1186 448 282 81 0 chrX 78838831 78838955 -87811341 + B1F2 SINE Alu 6 139 -10 3 1186 232 209 11 42 chrX 78839056 78839151 -87811145 + (TTTA)n Simple_repeat Simple_repeat 2 93 0 3 1186 8876 185 61 7 chrX 78839239 78840476 -87809820 + L1_Mur2 LINE L1 2862 4168 -1709 3 1186 1915 151 31 0 chrX 78840476 78840793 -87809503 + ORR1A2 LTR MaLR 1 327 0 3 1186 8876 185 61 7 chrX 78840793 78841603 -87808693 + L1_Mur2 LINE L1 4169 5019 -858 3 1186 1961 179 11 8 chrX 78841607 78841974 -87808322 - RLTR9A LTR ERVK 0 368 1 3 1186 306 171 25 50 chrX 78841975 78842055 -87808241 - ETnERV2-int LTR ERVK -2 7404 7327 3 1186 10177 225 20 25 chrX 78842487 78844818 -87805478 - ETnERV2-int LTR ERVK -1248 6158 3061 3 1186 1198 354 45 27 chrX 78844875 78845787 -87804509 - ETnERV2-int LTR ERVK -3518 2649 1722 3 1186 256 269 95 21 chrX 78845786 78845881 -87804415 - ETnERV-int LTR ERVK -4951 2455 2354 3 1186 531 0 0 0 chrX 78845959 78846018 -87804278 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 3 1186 3279 307 36 28 chrX 78846018 78847252 -87803044 - ETnERV-int LTR ERVK -1676 1638 395 3 1186 17545 142 55 12 chrX 78847257 78850679 -87799617 - L1_Mus2 LINE L1 -487 6079 2503 4 1186 2454 58 3 27 chrX 78850680 78851014 -87799282 - L1Md_F3 LINE L1 -15 6569 6244 4 1186 4018 146 99 21 chrX 78851014 78851482 -87798814 - L1VL4 LINE L1 -5468 834 376 4 1186 1243 104 22 0 chrX 78851482 78851665 -87798631 - B2_Mm2 SINE B2 -7 188 2 4 1186 4018 146 99 21 chrX 78851665 78851952 -87798344 - L1VL4 LINE L1 -5927 375 20 4 1186 517 343 28 35 chrX 78852015 78852302 -87797994 + Lx8 LINE L1 6201 6485 -988 4 1186 21 36 0 0 chrX 78852759 78852787 -87797509 + AT_rich Low_complexity Low_complexity 1 28 0 4 1186 17788 75 4 6 chrX 78856304 78859398 -87790898 - L1Md_F2 LINE L1 -5 6577 3488 4 1186 254 346 46 8 chrX 78859483 78859614 -87790682 + Tigger7 DNA MER2_type 2324 2459 -32 4 1186 22 35 0 0 chrX 78859922 78859951 -87790345 + AT_rich Low_complexity Low_complexity 1 29 0 4 1186 411 56 0 0 chrX 78860340 78860394 -87789902 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 4 1186 602 239 14 0 chrX 78860395 78860533 -87789763 - B1_Mur3 SINE Alu -9 140 1 4 1186 405 0 0 0 chrX 78860666 78860711 -87789585 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 4 1186 249 318 0 8 chrX 78861583 78861663 -87788633 - ID4_ SINE ID -56 96 20 4 1186 24 0 0 0 chrX 78862460 78862484 -87787812 + AT_rich Low_complexity Low_complexity 1 24 0 4 1186 638 220 126 47 chrX 78862655 78862826 -87787470 + B3 SINE B2 11 197 -19 4 1186 4453 116 20 30 chrX 78862826 78863582 -87786714 - RMER17A LTR ERVK -3 748 1 4 1186 638 220 126 47 chrX 78863582 78863601 -87786695 + B3 SINE B2 198 216 0 4 1186 289 344 48 53 chrX 78864071 78864116 -87786180 - Lx8 LINE L1 -93 7380 7333 4 1186 783 75 0 0 chrX 78864116 78864223 -87786073 + (TCTCCC)n Simple_repeat Simple_repeat 4 110 0 4 1186 289 344 48 53 chrX 78864223 78864383 -87785913 - Lx8 LINE L1 -141 7332 7177 4 1186 239 0 0 31 chrX 78864574 78864606 -87785690 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 4 1186 238 368 97 22 chrX 78866167 78866395 -87783901 - BLACKJACK DNA AcHobo -2154 790 546 4 1186 355 359 85 15 chrX 78866531 78866791 -87783505 - BLACKJACK DNA AcHobo -2574 370 93 4 1186 21 36 0 0 chrX 78868170 78868198 -87782098 + AT_rich Low_complexity Low_complexity 1 28 0 4 1186 1979 256 82 61 chrX 78868483 78869617 -87780679 - L1_Mur3 LINE L1 -1833 4047 2890 4 1186 5650 195 55 5 chrX 78869969 78871082 -87779214 - Lx2 LINE L1 -1 6996 5828 4 1186 1990 138 0 0 chrX 78871318 78871616 -87778680 + L1_Mur1 LINE L1 5512 5809 -77 4 1186 673 246 52 36 chrX 78871629 78871823 -87778473 + ORR1C2 LTR MaLR 174 370 -14 4 1186 455 256 28 8 chrX 78872107 78872226 -87778070 + B1_Mur4 SINE Alu 2 117 -30 4 1186 351 0 0 0 chrX 78872226 78872265 -87778031 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1186 373 273 65 50 chrX 78872265 78872284 -87778012 + B1_Mm SINE Alu 118 142 -5 4 1186 432 0 0 0 chrX 78872999 78873047 -87777249 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 1186 1677 191 26 39 chrX 78873139 78873607 -87776689 - RLTR41 LTR ERV1 -36 410 1 4 1186 596 272 7 7 chrX 78873591 78873739 -87776557 + MTD LTR MaLR 1 148 -271 4 1186 4869 76 20 0 chrX 78873742 78874387 -87775909 + L1_Mus1 LINE L1 5864 6521 -46 4 1186 2316 241 19 4 chrX 78874383 78874900 -87775396 + Lx9 LINE L1 6946 7470 -174 4 1186 9518 84 1 41 chrX 78874985 78877063 -87773233 + L1Md_F LINE L1 511 2502 -3381 4 1186 230 273 0 96 chrX 78877414 78877487 -87772809 + MamGypLTR2c LTR Gypsy 388 453 -615 4 1186 31 58 0 0 chrX 78877758 78877810 -87772486 + AT_rich Low_complexity Low_complexity 1 52 0 4 1186 461 331 16 8 chrX 78877835 78877960 -87772336 - B3A SINE B2 -68 130 5 4 1186 1533 235 91 18 chrX 78878648 78879043 -87771253 + Lx2B LINE L1 6169 6592 -408 4 1186 31310 83 2 5 chrX 78879043 78884111 -87766185 + L1Md_F2 LINE L1 535 5586 -297 4 1186 7972 57 0 1 chrX 78884112 78885145 -87765151 + L1Md_F2 LINE L1 5588 6582 0 4 1186 212 175 0 0 chrX 78885179 78885219 -87765077 + A-rich Low_complexity Low_complexity 1 40 0 4 1186 1286 247 6 64 chrX 78885220 78885677 -87764619 + Lx2B LINE L1 6236 6886 -114 4 1186 1880 192 43 46 chrX 78885683 78886145 -87764151 + L1VL4 LINE L1 764 1280 -5444 4 1186 462 88 0 0 chrX 78886148 78886216 -87764080 + L1Md_F2 LINE L1 6503 6570 -12 4 1186 336 127 0 0 chrX 78886451 78886506 -87763790 + (A)n Simple_repeat Simple_repeat 1 55 0 4 1186 411 38 0 0 chrX 78886513 78886566 -87763730 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1186 262 100 0 0 chrX 78886570 78886610 -87763686 + L1_Mur1 LINE L1 1335 1374 -4512 4 1186 3225 144 27 2 chrX 78886610 78887207 -87763089 + L1MC LINE L1 1447 2058 -1856 4 1186 594 64 0 50 chrX 78887212 78887311 -87762985 - L1Md_T LINE L1 0 6582 6489 4 1186 2534 68 0 0 chrX 78887314 78887639 -87762657 + L1_Mm LINE L1 4938 5262 -621 4 1186 8084 140 38 19 chrX 78887628 78888721 -87761575 + L1MC LINE L1 2041 3159 -755 4 1186 198 0 0 0 chrX 78888721 78888743 -87761553 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 1186 7615 179 38 20 chrX 78888743 78889356 -87760940 + L1MC LINE L1 3160 3800 -2346 4 1186 2271 149 11 18 chrX 78889359 78889817 -87760479 + L1_Mur2 LINE L1 4426 4880 -997 4 1186 2080 181 16 5 chrX 78889823 78890268 -87760028 + L1_Mur2 LINE L1 5000 5449 -428 4 1186 2772 232 52 46 chrX 78890334 78891210 -87759086 + Lx4B LINE L1 6173 7054 -4 4 1186 330 231 0 0 chrX 78891441 78891532 -87758764 + (TA)n Simple_repeat Simple_repeat 1 91 0 4 1186 608 283 57 17 chrX 78891535 78891695 -87758601 - B3 SINE B2 -9 207 41 4 1186 353 213 0 0 chrX 78891695 78891756 -87758540 + RMER6C LTR ERVK 1 61 -659 4 1186 2823 11 5 161 chrX 78891988 78892423 -87757873 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1186 6965 81 99 72 chrX 78892423 78893695 -87756601 + IAPEz-int LTR ERVK 3 1308 -5173 4 1186 27414 23 1 2 chrX 78893694 78896971 -87753325 + IAPEz-int LTR ERVK 3210 6481 0 4 1186 2823 11 5 161 chrX 78896971 78897406 -87752890 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1186 902 148 6 0 chrX 78897492 78897654 -87752642 + GA-rich Low_complexity Low_complexity 2 164 0 4 1186 1449 258 60 69 chrX 78897954 78898705 -87751591 + RMER6C LTR ERVK 116 722 -34 4 1186 438 101 0 0 chrX 78899375 78899444 -87750852 + (CA)n Simple_repeat Simple_repeat 1 69 0 4 1186 26 30 0 0 chrX 78899573 78899606 -87750690 + AT_rich Low_complexity Low_complexity 1 33 0 4 1186 5427 122 6 4 chrX 78900314 78901153 -87749143 - L1_Mus3 LINE L1 0 6638 5798 4 1186 185 0 40 0 chrX 78901196 78901221 -87749075 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1186 20262 176 18 43 chrX 78901347 78903962 -87746334 - L1_Mus3 LINE L1 -1250 5800 3174 4 1186 441 0 0 0 chrX 78903962 78904011 -87746285 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 4 1186 20262 175 15 60 chrX 78904011 78905018 -87745278 - L1_Mus3 LINE L1 -2710 3173 2178 4 1186 1177 105 23 0 chrX 78905018 78905190 -87745106 - B2_Mm1a SINE B2 0 193 18 4 148 20262 175 15 60 chrX 78905190 78906583 -87743713 - L1_Mus3 LINE L1 -2710 2177 799 4 1187 530 253 179 46 chrX 78906624 78906864 -87743432 + RLTR10A LTR ERVK 140 411 0 4 1187 350 358 12 8 chrX 78906865 78907107 -87743189 - L1_Mus3 LINE L1 -5844 813 571 4 1187 2965 72 48 7 chrX 78907168 78907586 -87742710 + L1Md_F2 LINE L1 6147 6581 -1 4 1187 687 262 17 18 chrX 78908193 78908412 -87741884 - ORR1C2 LTR MaLR -4 380 158 4 1187 292 271 19 0 chrX 78908421 78908528 -87741768 + (CAGAGA)n Simple_repeat Simple_repeat 2 110 0 4 1187 319 202 0 16 chrX 78908531 78908652 -87741644 + GA-rich Low_complexity Low_complexity 2 120 0 4 1187 662 273 34 11 chrX 78908697 78908875 -87741421 - ORR1C2 LTR MaLR -192 182 1 4 1187 232 273 0 57 chrX 78908884 78908954 -87741342 - Lx7 LINE L1 -423 7273 7208 4 1187 5197 107 12 8 chrX 78909007 78910361 -87739935 + L1Md_F2 LINE L1 495 1955 -3931 4 1187 16270 94 7 1 chrX 78910361 78912793 -87737503 + L1Md_F2 LINE L1 3142 5588 -298 4 1187 7687 67 1 2 chrX 78912794 78913787 -87736509 + L1Md_F2 LINE L1 5590 6581 -4 4 1187 351 0 0 0 chrX 78913862 78913901 -87736395 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1187 1193 327 32 46 chrX 78913902 78914595 -87735701 - Lx7 LINE L1 -637 7059 6377 4 1187 352 288 140 42 chrX 78914605 78914841 -87735455 - Lx7 LINE L1 -1204 6492 6234 4 1187 1187 60 0 0 chrX 78914844 78914995 -87735301 - L1Md_F2 LINE L1 -416 6166 6016 4 1187 29 47 0 0 chrX 78915213 78915256 -87735040 + AT_rich Low_complexity Low_complexity 1 43 0 4 1187 13641 94 4 4 chrX 78915281 78917313 -87732983 + L1_Mm LINE L1 3559 5587 -296 4 1187 7228 92 1 2 chrX 78917313 78918297 -87731999 + L1Md_F2 LINE L1 5588 6570 -12 4 1187 13641 94 4 4 chrX 78918297 78918317 -87731979 + L1_Mm LINE L1 5588 5609 -274 4 1187 24 96 0 0 chrX 78918481 78918554 -87731742 + AT_rich Low_complexity Low_complexity 1 73 0 4 1187 1116 289 100 80 chrX 78918744 78919240 -87731056 + RLTR40 LTR ERVK 14 492 -325 4 1187 313 88 0 0 chrX 78919240 78919297 -87730999 + L1_Mus4 LINE L1 6580 6636 0 4 1187 1116 289 100 80 chrX 78919297 78919551 -87730745 + RLTR40 LTR ERVK 493 779 -38 4 1187 26 30 0 0 chrX 78919613 78919646 -87730650 + AT_rich Low_complexity Low_complexity 1 33 0 4 1187 3729 195 53 13 chrX 78919709 78920019 -87730277 + Lx4A LINE L1 429 743 -6343 4 1187 910 281 165 36 chrX 78920019 78920521 -87729775 + RMER2 LTR ERV1 1 567 0 4 1187 3729 195 53 13 chrX 78920521 78921035 -87729261 + Lx4A LINE L1 744 1286 -5800 4 1187 2439 98 23 6 chrX 78921035 78921386 -87728910 + IAPEY2_LTR LTR ERVK 1 357 0 4 1187 2306 139 0 89 chrX 78921386 78921860 -87728436 + IAPEy-int LTR ERVK 1 432 -7081 4 1187 39476 6 0 1 chrX 78922163 78928952 -87721344 - L1Md_A LINE L1 0 6582 1 4 1187 8447 10 1 0 chrX 78929017 78930328 -87719968 - L1Md_A LINE L1 0 6582 5271 4 1187 932 129 337 27 chrX 78930414 78930829 -87719467 + IAPEy-int LTR ERVK 409 952 -6629 4 1187 1508 198 205 25 chrX 78930941 78931423 -87718873 + RMER16-int LTR ERVK 251 819 -4587 4 1187 443 230 88 0 chrX 78931428 78931541 -87718755 + RMER16-int LTR ERVK 938 1060 -5077 4 1187 276 267 0 55 chrX 78931554 78931645 -87718651 + IAPEy-int LTR ERVK 2454 2539 -4867 4 1187 596 210 0 0 chrX 78931657 78931776 -87718520 + IAPEy-int LTR ERVK 2635 2753 -4653 4 1187 397 89 0 0 chrX 78931802 78931858 -87718438 + IAPEy-int LTR ERVK 3567 3622 -3784 4 1187 551 62 24 12 chrX 78931857 78931939 -87718357 + IAPEy-int LTR ERVK 4567 4649 -2932 4 1187 3017 102 0 18 chrX 78932218 78932666 -87717630 + IAPEy-int LTR ERVK 5203 5642 -1939 4 1187 3364 77 0 2 chrX 78932657 78933112 -87717184 + IAPEy-int LTR ERVK 5761 6214 -1367 4 1187 4975 103 5 8 chrX 78933102 78933857 -87716439 + IAPEy-int LTR ERVK 6735 7487 -26 4 1187 9692 154 25 47 chrX 78933860 78933881 -87716415 + Lx4A LINE L1 1258 1279 -4598 4 1187 2198 132 26 6 chrX 78933881 78934231 -87716065 + IAPEY2_LTR LTR ERVK 1 357 0 4 1187 9692 154 25 47 chrX 78934231 78936395 -87713901 + Lx4A LINE L1 1280 3394 -2483 4 1187 8031 131 14 7 chrX 78936397 78937802 -87712494 + Lx3A LINE L1 5543 6951 -30 4 1187 315 0 0 0 chrX 78937803 78937838 -87712458 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 4 1187 229 200 0 0 chrX 78937845 78937900 -87712396 + MusHAL1 LINE L1 2224 2278 -434 4 1187 369 0 0 0 chrX 78937902 78937943 -87712353 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 4 1187 5523 171 16 2 chrX 78937950 78939038 -87711258 + Lx4A LINE L1 3421 4523 -1354 4 1187 7138 173 25 10 chrX 78939039 78941181 -87709115 + Lx4A LINE L1 4874 7056 -2 4 1187 28 0 0 0 chrX 78941181 78941209 -87709087 + AT_rich Low_complexity Low_complexity 1 28 0 4 1187 2037 214 33 22 chrX 78941353 78941812 -87708484 - RMER5 LTR ERV1 -8 526 63 4 1187 679 182 6 12 chrX 78941844 78942005 -87708291 + Lx LINE L1 6488 6647 -7 4 1187 24 0 0 0 chrX 78943033 78943057 -87707239 + AT_rich Low_complexity Low_complexity 1 24 0 4 1187 402 271 88 56 chrX 78944087 78944121 -87706175 - B3 SINE B2 -86 130 103 4 1187 4045 66 60 8 chrX 78944121 78944653 -87705643 + LTRIS2 LTR ERV1 5 564 0 4 1187 402 271 88 56 chrX 78944653 78944743 -87705553 - B3 SINE B2 -114 102 2 4 1187 22 0 0 0 chrX 78944809 78944831 -87705465 + AT_rich Low_complexity Low_complexity 1 22 0 4 1187 771 369 70 28 chrX 78945196 78945553 -87704743 + MTE2a LTR MaLR 1 372 -7 4 1187 1845 86 2 56 chrX 78946675 78946977 -87703319 - Lx LINE L1 -688 5966 5714 4 1187 21 36 0 0 chrX 78946986 78947014 -87703282 + AT_rich Low_complexity Low_complexity 1 28 0 5 1187 837 106 0 0 chrX 78947014 78947127 -87703169 - L1_Mus1 LINE L1 -334 6233 6121 5 1187 660 258 84 47 chrX 78947181 78947558 -87702738 + MT2B LTR ERVL 3 486 -115 5 1187 227 204 0 0 chrX 78947559 78947608 -87702688 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 1187 698 226 0 106 chrX 78947625 78947823 -87702473 + MERVL_2A-int LTR ERVL 1 177 -5584 5 1187 477 194 20 20 chrX 78947871 78947971 -87702325 + MERVL_2A-int LTR ERVL 350 449 -5312 5 1187 3928 133 2 0 chrX 78947971 78948571 -87701725 - L1_Mus2 LINE L1 -4 5879 5279 5 1187 4344 117 12 4 chrX 78948573 78949251 -87701045 + L1_Mus2 LINE L1 5881 6563 -3 5 1187 7370 234 95 14 chrX 78949279 78950905 -87699391 + MERVL_2A-int LTR ERVL 444 2234 -3527 5 1187 5505 151 17 18 chrX 78950905 78951864 -87698432 + RMER17B LTR ERVK 1 958 0 5 1187 9719 234 62 12 chrX 78951864 78955054 -87695242 + MERVL_2A-int LTR ERVL 2235 5551 -210 5 1187 224 336 45 90 chrX 78955057 78955191 -87695105 - B4A SINE B4 -124 168 41 5 1187 221 0 0 33 chrX 78955328 78955358 -87694938 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 1187 21 0 0 0 chrX 78955436 78955457 -87694839 + AT_rich Low_complexity Low_complexity 1 21 0 5 1187 35 41 0 0 chrX 78956148 78956197 -87694099 + AT_rich Low_complexity Low_complexity 1 49 0 5 1187 180 0 0 0 chrX 78956925 78956945 -87693351 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 1187 966 271 103 24 chrX 78957005 78957334 -87692962 + ORR1D1 LTR MaLR 4 358 -16 5 1187 21 36 0 0 chrX 78957789 78957817 -87692479 + AT_rich Low_complexity Low_complexity 1 28 0 5 1187 1209 284 36 39 chrX 78959055 78959411 -87690885 - MTEa LTR MaLR -9 370 16 5 1187 503 276 177 5 chrX 78959417 78959632 -87690664 + Lx9 LINE L1 7239 7490 -154 5 1187 2148 37 11 7 chrX 78960685 78960957 -87689339 - L1Md_F3 LINE L1 -15 6569 6297 5 1187 629 308 5 9 chrX 78961815 78962025 -87688271 + B3 SINE B2 5 213 -3 5 1187 2406 94 56 3 chrX 78962360 78962701 -87687595 + RLTR10D LTR ERVK 1 359 0 5 1187 406 95 0 45 chrX 78962775 78962863 -87687433 + (TTG)n Simple_repeat Simple_repeat 1 84 0 5 1187 243 0 0 0 chrX 78962867 78962894 -87687402 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1187 1170 42 0 7 chrX 78962894 78963033 -87687263 - B1_Mus2 SINE Alu -4 143 5 5 1187 7682 165 16 18 chrX 78963275 78964107 -87686189 - Lx2 LINE L1 0 6997 6160 5 1187 3411 30 2 0 chrX 78964107 78964502 -87685794 + MTA_Mm LTR MaLR 1 396 0 5 1187 9065 22 28 0 chrX 78964502 78965570 -87684726 + MTA_Mm-int LTR MaLR 1 1098 0 5 1187 3415 23 5 0 chrX 78965570 78965964 -87684332 + MTA_Mm LTR MaLR 1 396 0 5 1187 7682 182 16 32 chrX 78965964 78966828 -87683468 - Lx2 LINE L1 -838 6159 5305 5 1187 2602 46 9 21 chrX 78966828 78967159 -87683137 + IAPLTR2b LTR ERVK 1 327 0 5 1187 2676 217 16 60 chrX 78967159 78967285 -87683011 - Lx2 LINE L1 -573 5304 5207 5 1187 225 0 0 0 chrX 78967312 78967337 -87682959 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 5 1187 486 16 7 120 chrX 78967351 78967635 -87682661 + (TTTTTG)n Simple_repeat Simple_repeat 1 251 0 5 1187 5020 189 49 11 chrX 78967636 78968774 -87681522 - L1_Mur2 LINE L1 -567 5310 4130 5 1187 2266 150 13 29 chrX 78968774 78969221 -87681075 - RMER17D2 LTR ERVK 0 809 370 5 1187 1432 121 8 4 chrX 78969228 78969481 -87680815 + L1_Mur2 LINE L1 3699 3954 -2192 5 1187 2349 153 7 20 chrX 78969481 78969888 -87680408 - RMER17D2 LTR ERVK -407 402 1 5 1187 2319 176 34 0 chrX 78969888 78970353 -87679943 - L1_Mur1 LINE L1 -1742 4144 3664 5 1187 6153 203 57 50 chrX 78970350 78972899 -87677397 + Lx2 LINE L1 4465 6995 -2 5 1187 22 35 0 0 chrX 78973175 78973204 -87677092 + AT_rich Low_complexity Low_complexity 1 29 0 5 1187 297 0 0 0 chrX 78973520 78973553 -87676743 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1187 519 284 7 29 chrX 78973690 78973828 -87676468 + B1_Mur2 SINE Alu 10 144 -5 5 1187 438 20 0 0 chrX 78974140 78974191 -87676105 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1187 28 29 0 0 chrX 78974639 78974674 -87675622 + AT_rich Low_complexity Low_complexity 1 35 0 5 1187 264 318 82 77 chrX 78975289 78975483 -87674813 - RLTR25B LTR ERVK 0 1028 834 5 1187 1499 75 19 0 chrX 78975540 78975753 -87674543 + L1Md_F2 LINE L1 6363 6579 -3 5 1187 332 395 22 40 chrX 78976089 78976313 -87673983 - RLTR25B LTR ERVK -797 231 12 5 1187 3260 243 45 17 chrX 78977581 78978518 -87671778 + Lx3C LINE L1 6011 7050 -8 5 1187 21 0 0 0 chrX 78978892 78978913 -87671383 + AT_rich Low_complexity Low_complexity 1 21 0 5 1187 189 0 0 0 chrX 78979059 78979080 -87671216 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 1187 321 26 0 0 chrX 78979657 78979695 -87670601 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 5 1187 243 308 0 0 chrX 78979696 78979761 -87670535 + MLT1H LTR MaLR 224 288 -261 5 1187 43 47 0 0 chrX 78980033 78980097 -87670199 + AT_rich Low_complexity Low_complexity 1 64 0 5 1187 6874 104 7 3 chrX 78980112 78981373 -87668923 - L1Md_F2 LINE L1 -2 6580 5313 5 1187 378 149 0 15 chrX 78981350 78981418 -87668878 + L1_Mm LINE L1 4569 4635 -1248 5 1187 195 42 0 0 chrX 78981926 78981950 -87668346 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 1187 27 0 0 0 chrX 78982059 78982086 -87668210 + AT_rich Low_complexity Low_complexity 1 27 0 5 1187 7025 166 65 8 chrX 78982100 78984294 -87666002 - Lx3B LINE L1 -3 6970 4658 5 1187 866 83 0 8 chrX 78984298 78984419 -87665877 - L1_Mm LINE L1 -3562 2321 2202 5 1187 9538 75 4 2 chrX 78984405 78985694 -87664602 + L1Md_F2 LINE L1 4295 5585 -298 5 1187 7860 52 5 8 chrX 78985695 78986669 -87663627 + L1Md_F2 LINE L1 5587 6563 -19 5 1187 459 0 0 0 chrX 78986669 78986720 -87663576 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 1187 1080 82 0 0 chrX 78986724 78986871 -87663425 + B1_Mm SINE Alu 1 147 0 5 1187 7860 52 5 8 chrX 78986871 78986980 -87663316 + L1Md_F2 LINE L1 6564 6582 0 5 1187 19296 164 102 13 chrX 78987004 78988992 -87661304 + L1Md_F LINE L1 305 2311 -3572 5 1187 405 0 0 0 chrX 78988992 78989037 -87661259 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1187 19296 132 138 4 chrX 78989037 78991545 -87658751 + L1Md_F LINE L1 2312 5313 -570 5 1187 818 62 0 9 chrX 78991549 78991662 -87658634 + L1_Mus1 LINE L1 5850 5961 -606 5 1187 2948 294 26 32 chrX 78991662 78992591 -87657705 + RodERV21-int LTR ERV1 1796 2718 -2273 5 1187 543 320 28 43 chrX 78992639 78993037 -87657259 + RodERV21-int LTR ERV1 3512 3903 -3188 5 1187 1107 106 0 40 chrX 78993713 78993811 -87656485 - L1_Mus3 LINE L1 -561 6077 5986 5 1187 4842 170 69 3 chrX 78993811 78994710 -87655586 + RMER17B LTR ERVK 1 958 0 5 1187 1630 183 37 3 chrX 78994710 78995081 -87655215 - L1_Mus3 LINE L1 -756 5121 4764 5 1187 3515 137 9 0 chrX 78995081 78995627 -87654669 + L1_Mus3 LINE L1 6082 6632 -6 5 1187 2280 360 47 50 chrX 78996934 78998765 -87651531 + RodERV21-int LTR ERV1 2694 4518 -473 5 1187 1621 143 119 10 chrX 78998765 78999076 -87651220 + IAPLTR4 LTR ERVK 1 345 0 5 1187 7804 30 11 0 chrX 78999076 79000000 -87650296 + IAPLTR4_I LTR ERVK 19 952 -518 5 1187 993 48 8 0 chrX 79000000 79000125 -87650171 + IAPLTR4_I LTR ERVK 953 1078 -392 1 1187 2176 81 29 8 chrX 79000117 79000467 -87649829 + IAPLTR4_I LTR ERVK 838 1470 0 1 1187 1176 211 110 68 chrX 79000578 79001075 -87649221 + ETnERV3-int LTR ERVK 251 668 -5469 2 1187 458 183 92 0 chrX 79001073 79001193 -87649103 + ETnERV3-int LTR ERVK 1719 1849 -5557 2 1187 267 291 0 55 chrX 79001202 79001293 -87649003 + ETnERV3-int LTR ERVK 2454 2539 -4867 2 1187 6455 111 67 9 chrX 79001305 79002658 -87647638 + ETnERV3-int LTR ERVK 2735 4271 -3135 2 1187 457 179 18 45 chrX 79002663 79002774 -87647522 + MMETn-int LTR ERVK 2357 2464 -2380 3 1187 799 85 17 8 chrX 79002800 79002919 -87647377 + ETnERV3-int LTR ERVK 4530 4649 -2932 2 1187 6275 246 51 39 chrX 79003050 79005574 -87644722 + IAPLTR3-int LTR ERVK 3466 7329 -351 4 1187 1532 96 22 13 chrX 79005574 79005792 -87644504 + IAPLTR4 LTR ERVK 1 217 -128 4 1187 3061 6 5 59 chrX 79005792 79006180 -87644116 - IAPLTR1_Mm LTR ERVK 0 367 1 5 1187 1532 96 22 13 chrX 79006180 79006193 -87644103 + IAPLTR4 LTR ERVK 218 233 -112 4 1187 28714 21 1 1 chrX 79006193 79009454 -87640842 - IAPEz-int LTR ERVK -13 6468 3210 6 1187 8543 71 52 14 chrX 79009453 79010707 -87639589 - IAPEz-int LTR ERVK -5168 1313 67 6 1187 981 93 60 0 chrX 79010678 79010828 -87639468 - IAPEz-int LTR ERVK -6285 196 38 6 1187 3061 6 5 59 chrX 79010841 79011229 -87639067 - IAPLTR1_Mm LTR ERVK 0 367 1 7 1187 469 230 26 0 chrX 79011229 79011331 -87638965 + IAPEY3_LTR LTR ERVK 227 331 -1 8 1187 439 337 25 32 chrX 79011332 79011614 -87638682 + RodERV21-int LTR ERV1 4514 4793 -198 9 1187 4260 168 6 5 chrX 79012118 79012956 -87637340 - L1_Mur1 LINE L1 -1684 4202 3364 1 1187 6644 150 33 17 chrX 79012955 79014213 -87636083 + L1_Mur1 LINE L1 2093 3371 -2515 1 1187 190 288 0 0 chrX 79014278 79014337 -87635959 - MIR SINE MIR -105 157 99 1 1187 1170 55 7 0 chrX 79014855 79015000 -87635296 + B1_Mus2 SINE Alu 2 147 0 1 1187 276 120 0 0 chrX 79015013 79015063 -87635233 + (A)n Simple_repeat Simple_repeat 1 50 0 1 1187 3189 216 42 36 chrX 79015335 79015666 -87634630 - Lx4B LINE L1 0 7058 6709 1 1187 357 24 0 0 chrX 79015666 79015708 -87634588 + (TATG)n Simple_repeat Simple_repeat 2 43 0 1 1187 3189 216 42 36 chrX 79015708 79016097 -87634199 - Lx4B LINE L1 -350 6708 6335 1 1187 1298 164 126 3 chrX 79016098 79016392 -87633904 + Lx4A LINE L1 5038 5367 -510 1 1187 44 0 0 0 chrX 79016750 79016794 -87633502 + AT_rich Low_complexity Low_complexity 1 44 0 1 1187 209 33 33 0 chrX 79016956 79016986 -87633310 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1187 2513 170 25 96 chrX 79016997 79017236 -87633060 + Lx4A LINE L1 5347 5588 -289 1 1187 6931 77 6 0 chrX 79017236 79018124 -87632172 - RLTR13B1 LTR ERVK 0 893 1 1 1187 3450 173 35 74 chrX 79018124 79018288 -87632008 + Lx4A LINE L1 5589 5753 -1305 1 1187 272 83 0 0 chrX 79018288 79018324 -87631972 - U2 snRNA snRNA -152 36 1 1 1187 3450 173 35 74 chrX 79018324 79018912 -87631384 + Lx4A LINE L1 5754 6346 -712 1 1187 5236 275 85 22 chrX 79019001 79019248 -87631048 - Lx6 LINE L1 -30 7430 7187 2 1187 459 0 0 0 chrX 79019248 79019299 -87630997 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 1187 318 67 0 0 chrX 79019299 79019343 -87630953 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1187 213 39 0 0 chrX 79019343 79019369 -87630927 + (TCTCCC)n Simple_repeat Simple_repeat 6 31 0 2 1187 5236 238 116 33 chrX 79019369 79021901 -87628395 - Lx6 LINE L1 -274 7186 4400 2 1187 22 56 0 0 chrX 79022816 79022852 -87627444 + AT_rich Low_complexity Low_complexity 1 36 0 2 1187 327 333 69 8 chrX 79023596 79023726 -87626570 + ID_B1 SINE B4 87 224 0 2 1187 438 137 0 0 chrX 79023727 79023822 -87626474 + (A)n Simple_repeat Simple_repeat 1 95 0 2 1187 684 304 67 40 chrX 79023854 79024107 -87626189 + B4A SINE B4 6 265 -27 2 1187 5600 221 54 48 chrX 79024107 79025913 -87624383 + L1_Mur3 LINE L1 2130 3945 -1935 2 1187 1000 281 86 28 chrX 79026054 79026486 -87623810 + Lx7 LINE L1 5762 6218 -1478 2 1187 2165 197 92 62 chrX 79026489 79026695 -87623601 - RMER4B LTR ERVK 0 585 343 3 1187 5169 55 0 32 chrX 79026695 79027376 -87622920 + L1Md_F2 LINE L1 5921 6579 -3 3 1187 2165 197 92 62 chrX 79027376 79027737 -87622559 - RMER4B LTR ERVK -243 342 1 3 1187 3442 290 34 91 chrX 79027746 79028479 -87621817 + Lx7 LINE L1 6244 6960 -736 2 1187 1364 51 6 0 chrX 79028479 79028656 -87621640 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 3 1187 3442 290 34 91 chrX 79028656 79028717 -87621579 + Lx7 LINE L1 6961 6963 -733 2 1187 330 26 0 0 chrX 79028717 79028756 -87621540 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 3 1187 3535 170 13 16 chrX 79028757 79029432 -87620864 - Lx3A LINE L1 -16 6965 6293 3 1187 3442 290 34 91 chrX 79029432 79029972 -87620324 + Lx7 LINE L1 6964 7507 -189 2 1187 351 0 0 0 chrX 79029972 79030011 -87620285 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 3 1187 3442 290 34 91 chrX 79030011 79030196 -87620100 + Lx7 LINE L1 7508 7680 -16 2 1187 353 86 0 0 chrX 79030220 79030278 -87620018 - Lx2 LINE L1 -2 6995 6938 3 1187 2639 196 6 22 chrX 79030286 79030787 -87619509 + Lx2 LINE L1 6478 6970 -27 3 1187 198 0 0 0 chrX 79030787 79030809 -87619487 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 3 1187 456 323 71 4 chrX 79030814 79031066 -87619230 + L1MA8 LINE L1 5533 5801 -499 3 1187 238 280 20 0 chrX 79031315 79031415 -87618881 + L1MA8 LINE L1 6139 6240 -51 3 1187 427 347 0 11 chrX 79032812 79032990 -87617306 - Lx6 LINE L1 -106 7354 7179 4 1187 214 186 16 33 chrX 79033033 79033094 -87617202 + A-rich Low_complexity Low_complexity 5 64 0 4 1187 1393 241 6 40 chrX 79033135 79033481 -87616815 - L1_Mur3 LINE L1 -143 5737 5404 4 1187 6832 86 30 3 chrX 79033505 79034458 -87615838 + L1_Mus1 LINE L1 5588 6566 -1 4 1187 464 193 23 0 chrX 79034470 79034558 -87615738 - L1_Mur3 LINE L1 -470 5410 5321 4 1187 1743 170 26 17 chrX 79034568 79034916 -87615380 - RLTR15 LTR ERVK -8 351 1 4 1187 2027 227 32 8 chrX 79034916 79035171 -87615125 - L1_Mur3 LINE L1 -555 5325 5057 4 1187 513 0 0 0 chrX 79035171 79035228 -87615068 + (TA)n Simple_repeat Simple_repeat 1 57 0 4 1187 2027 227 32 8 chrX 79035228 79035279 -87615017 - L1_Mur3 LINE L1 -824 5056 5009 4 1187 1093 81 44 0 chrX 79035279 79035439 -87614857 - L1Md_F2 LINE L1 -1 6581 6415 4 1187 2027 227 32 8 chrX 79035439 79035722 -87614574 - L1_Mur3 LINE L1 -872 5008 4722 4 1187 405 0 0 0 chrX 79035725 79035770 -87614526 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 1187 543 85 0 0 chrX 79035770 79035851 -87614445 + (TG)n Simple_repeat Simple_repeat 1 82 0 4 148 8689 247 76 14 chrX 79035853 79040226 -87610070 + Lx6 LINE L1 2083 7111 -349 4 1188 1483 330 108 36 chrX 79040381 79040800 -87609496 - Lx7 LINE L1 -410 7286 6848 5 1188 894 179 149 0 chrX 79040800 79040995 -87609301 - URR1A DNA MER1_type -2 224 1 5 1188 1483 330 108 36 chrX 79040995 79041377 -87608919 - Lx7 LINE L1 -849 6847 6427 5 1188 7172 186 34 52 chrX 79042412 79042920 -87607376 + Lx2B LINE L1 4255 4730 -1147 5 1188 495 0 0 0 chrX 79042920 79042975 -87607321 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 5 1188 7172 190 34 43 chrX 79042975 79044494 -87605802 + Lx2B LINE L1 4731 6268 -732 5 1188 876 158 0 0 chrX 79044496 79044629 -87605667 + ORR1A3 LTR MaLR 186 318 -8 5 1188 273 98 0 0 chrX 79044800 79044841 -87605455 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 5 1188 394 287 51 93 chrX 79044865 79045080 -87605216 - MTEb LTR MaLR -173 206 1 5 1188 724 356 64 16 chrX 79045157 79045531 -87604765 - MLT1F-int LTR MaLR -65 1424 1033 5 1188 975 54 0 0 chrX 79045968 79046098 -87604198 + (TG)n Simple_repeat Simple_repeat 2 131 0 5 1188 239 330 43 68 chrX 79046116 79046233 -87604063 - RSINE1 SINE B4 -38 127 14 5 1188 1222 186 4 8 chrX 79046809 79047058 -87603238 - Lx LINE L1 -3 6651 6404 6 1188 4191 173 57 22 chrX 79047058 79047929 -87602367 + RLTR13D6 LTR ERVK 1 902 0 6 1188 3897 139 41 5 chrX 79047932 79048591 -87601705 - Lx LINE L1 -248 6406 5724 6 1188 9786 125 36 6 chrX 79048586 79048758 -87601538 - MusHAL1 LINE L1 -935 2418 2244 6 1188 195 42 0 0 chrX 79048758 79048782 -87601514 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1188 9786 123 33 6 chrX 79048782 79050383 -87599913 - MusHAL1 LINE L1 -1110 2243 594 6 1188 593 251 171 46 chrX 79050383 79050629 -87599667 - RLTR10A LTR ERVK 0 411 114 6 1188 3568 194 6 0 chrX 79050677 79051321 -87598975 - L1VL4 LINE L1 -5501 801 154 6 1188 303 258 126 50 chrX 79051700 79051859 -87598437 - L1_Mur3 LINE L1 -2224 3656 3486 6 1188 2793 254 92 14 chrX 79051860 79051883 -87598413 + Lx6 LINE L1 4822 4844 -1033 6 1188 2216 218 19 19 chrX 79051883 79052411 -87597885 + RLTR11A LTR ERVK 1 528 0 6 1188 3025 233 50 19 chrX 79052411 79053482 -87596814 + Lx6 LINE L1 4845 5953 -1507 6 1188 1635 203 166 116 chrX 79053590 79054236 -87596060 - RMER6C LTR ERVK -2 688 11 6 1188 1406 275 118 28 chrX 79054266 79054764 -87595532 + Lx6 LINE L1 6092 6634 -826 6 1188 658 213 13 20 chrX 79054761 79054914 -87595382 + Lx6 LINE L1 6759 6910 -550 6 1188 945 183 46 14 chrX 79054912 79055128 -87595168 - L1_Mur3 LINE L1 -3931 1949 1727 6 1188 6920 198 34 2 chrX 79055150 79056765 -87593531 - Lx2 LINE L1 -13 6984 5319 7 1188 3522 261 58 55 chrX 79056766 79058486 -87591810 - L1_Mur3 LINE L1 -4168 1712 19 6 1188 8937 188 31 9 chrX 79058515 79058802 -87591494 + Lx5 LINE L1 3805 4098 -1779 7 1188 5404 62 20 11 chrX 79058802 79059501 -87590795 - L1Md_F2 LINE L1 -12 6570 5866 7 1188 8937 201 30 11 chrX 79059501 79062014 -87588282 + Lx5 LINE L1 4099 6670 -380 7 1188 4925 135 57 32 chrX 79062020 79062459 -87587837 + RMER17A2 LTR ERVK 4 462 -444 7 1188 591 53 0 0 chrX 79062459 79062534 -87587762 + (TC)n Simple_repeat Simple_repeat 2 76 0 7 1188 4925 135 57 32 chrX 79062534 79062975 -87587321 + RMER17A2 LTR ERVK 463 906 0 7 1188 1443 219 37 24 chrX 79063009 79063303 -87586993 + RLTR26 LTR ERVK 345 642 0 7 1188 592 261 62 6 chrX 79063304 79063466 -87586830 + Lx5 LINE L1 6668 6838 -212 7 1188 24 32 0 0 chrX 79064212 79064243 -87586053 + AT_rich Low_complexity Low_complexity 1 31 0 7 1188 237 203 0 75 chrX 79065483 79065563 -87584733 + A-rich Low_complexity Low_complexity 3 76 0 7 1188 186 133 0 0 chrX 79065691 79065721 -87584575 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 7 1188 195 42 0 0 chrX 79068174 79068198 -87582098 + (GGGA)n Simple_repeat Simple_repeat 2 25 0 7 1188 21 57 0 0 chrX 79068397 79068432 -87581864 + AT_rich Low_complexity Low_complexity 1 35 0 8 1188 6726 116 8 1 chrX 79068474 79069735 -87580561 - L1_Mus3 LINE L1 0 6638 5365 8 1188 4133 173 69 28 chrX 79069750 79070610 -87579686 - RMER17A2 LTR ERVK -11 895 1 8 1188 1399 221 14 138 chrX 79070635 79070929 -87579367 - L1_Mus3 LINE L1 -578 5305 5054 8 1188 329 132 66 0 chrX 79070929 79071005 -87579291 - L1Md_F2 LINE L1 -1 6581 6501 8 1188 1399 221 14 138 chrX 79071005 79071289 -87579007 - L1_Mus3 LINE L1 -830 5053 4799 8 1188 228 311 30 0 chrX 79072028 79072160 -87578136 - L1MD1 LINE L1 0 6242 6107 8 1188 36 40 0 0 chrX 79072620 79072670 -87577626 + AT_rich Low_complexity Low_complexity 1 50 0 8 1188 243 61 0 0 chrX 79072678 79072711 -87577585 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1188 339 65 0 0 chrX 79072711 79072757 -87577539 + (GA)n Simple_repeat Simple_repeat 1 46 0 8 1188 233 152 22 0 chrX 79072999 79073045 -87577251 + (TTTG)n Simple_repeat Simple_repeat 1 47 0 8 1188 818 254 62 22 chrX 79073045 79073080 -87577216 - B2_Mm1t SINE B2 -1 215 182 8 1188 1121 83 7 0 chrX 79073080 79073224 -87577072 - B1_Mus2 SINE Alu -1 146 2 9 1188 988 168 32 1 chrX 79073224 79073394 -87576902 - B2_Mm2 SINE B2 -12 181 2 8 1188 789 335 144 11 chrX 79073712 79074238 -87576058 + RMER1B Other Other 1 510 -556 9 1188 427 333 0 0 chrX 79074223 79074337 -87575959 + RMER1B Other Other 355 468 -598 9 1188 13011 199 73 36 chrX 79074332 79077729 -87572567 - L1_Mur2 LINE L1 -127 5750 2194 9 1188 6653 49 0 0 chrX 79077729 79078541 -87571755 + L1Md_F2 LINE L1 5770 6581 -1 9 1188 13011 199 73 36 chrX 79078541 79078700 -87571596 - L1_Mur2 LINE L1 -3684 2193 2062 9 1188 6765 81 15 13 chrX 79078770 79079762 -87570534 - L1Md_F2 LINE L1 -1 6581 5588 9 1188 1578 133 17 7 chrX 79079780 79080082 -87570214 - L1VL4 LINE L1 -1906 1653 1349 9 1188 12207 59 1 1 chrX 79080079 79082404 -87567892 - L1Md_F2 LINE L1 -12 6570 4245 9 1188 3390 163 27 21 chrX 79082416 79083474 -87566822 - L1VL4 LINE L1 -2296 1263 203 9 1188 1728 157 25 134 chrX 79083484 79083981 -87566315 - L1_Mur2 LINE L1 -959 4918 4475 9 1188 2046 209 142 23 chrX 79083981 79084501 -87565795 - RLTR31A_Mm LTR ERVK 0 584 3 9 1188 1728 157 25 134 chrX 79084501 79084518 -87565778 - L1_Mur2 LINE L1 -1403 4474 4460 9 1188 646 231 49 45 chrX 79084518 79084804 -87565492 - RMER3D-int LTR ERVK -16 2826 2540 9 1188 2113 99 15 45 chrX 79084804 79085141 -87565155 - IAPLTR2b LTR ERVK 0 327 1 1 1188 5266 71 33 12 chrX 79085143 79085898 -87564398 - IAPEz-int LTR ERVK -2 6479 5709 1 1188 2974 20 0 0 chrX 79085889 79086246 -87564050 - IAPEz-int LTR ERVK -2124 4357 4001 1 1188 9069 95 88 29 chrX 79086244 79088918 -87561378 - IAPEz-int LTR ERVK -3707 2774 17 1 1188 342 134 60 0 chrX 79088902 79088969 -87561327 - IAPEz-int LTR ERVK -1914 73 3 1 1188 2170 90 15 50 chrX 79088971 79089310 -87560986 - IAPLTR2b LTR ERVK 0 327 1 1 1188 4451 236 53 49 chrX 79089312 79091383 -87558913 - RMER3D-int LTR ERVK -299 2543 1 9 1188 2172 203 158 16 chrX 79091383 79091894 -87558402 - RLTR31A_Mm LTR ERVK 0 584 1 9 1188 5717 172 42 9 chrX 79091898 79093172 -87557124 - L1_Mur2 LINE L1 -1403 4474 3160 9 1188 873 76 0 0 chrX 79093172 79093290 -87557006 + ORR1A0 LTR MaLR 141 258 -88 1 1188 10882 119 58 7 chrX 79093301 79096155 -87554141 + L1Md_F LINE L1 420 4000 -1880 1 1188 902 51 0 0 chrX 79096156 79096273 -87554023 + L1_Mm LINE L1 3859 3975 -1908 1 1188 1863 52 0 4 chrX 79096273 79096522 -87553774 + L1_Mm LINE L1 4687 4934 -949 1 1188 2624 252 57 10 chrX 79096521 79097388 -87552908 - L1_Mur2 LINE L1 -5963 1123 375 9 1188 915 175 22 38 chrX 79097388 79097572 -87552724 - RLTR25A LTR ERVK -431 672 492 1 1188 338 185 26 89 chrX 79097707 79097964 -87552332 + (TATAA)n Simple_repeat Simple_repeat 1 240 0 1 1188 313 211 63 7 chrX 79097906 79098049 -87552247 + (TA)n Simple_repeat Simple_repeat 1 151 0 1 1188 1572 106 0 0 chrX 79098542 79098760 -87551536 - L1_Mus1 LINE L1 0 6567 6350 1 1188 5230 88 14 1 chrX 79098762 79099682 -87550614 + L1_Mus1 LINE L1 5402 6333 -234 1 1188 28 71 0 0 chrX 79099748 79099804 -87550492 + AT_rich Low_complexity Low_complexity 1 56 0 1 1188 564 253 44 17 chrX 79099898 79100079 -87550217 - Lx2B LINE L1 0 7000 6815 1 1188 1148 330 13 34 chrX 79100364 79100982 -87549314 - Lx9 LINE L1 -278 7366 6762 1 1188 261 0 0 0 chrX 79101012 79101041 -87549255 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 1188 3420 293 95 9 chrX 79101044 79102351 -87547945 - Lx6 LINE L1 -5 7455 6037 1 1188 610 271 28 6 chrX 79102435 79102617 -87547679 - Lx6 LINE L1 -8 7452 7267 1 1188 3113 61 5 2 chrX 79102692 79103087 -87547209 + MTA_Mm LTR MaLR 1 396 0 1 1188 2330 208 82 8 chrX 79103111 79103877 -87546419 - Lx6 LINE L1 -1083 5967 5151 1 1188 33 25 0 0 chrX 79103889 79103929 -87546367 + AT_rich Low_complexity Low_complexity 1 40 0 1 1188 781 149 91 0 chrX 79103929 79104083 -87546213 - Lx3_Mus LINE L1 -21 6988 6821 1 1188 22 0 0 0 chrX 79104335 79104357 -87545939 + AT_rich Low_complexity Low_complexity 1 22 0 1 1188 700 305 123 35 chrX 79104476 79104907 -87545389 - Lx9 LINE L1 -369 7275 6807 1 1188 1298 256 82 24 chrX 79105651 79106228 -87544068 - L1MC LINE L1 -3364 2782 2173 1 1188 3542 67 4 2 chrX 79106281 79106744 -87543552 - L1_Mus1 LINE L1 -1 6566 6103 1 1188 2792 96 8 2 chrX 79106756 79107152 -87543144 - MTB LTR MaLR -2 398 1 1 1188 333 0 0 0 chrX 79107420 79107457 -87542839 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1188 354 263 67 82 chrX 79107882 79108077 -87542219 + L1MC LINE L1 2792 2983 -3163 1 1188 29870 6 0 0 chrX 79108104 79113475 -87536821 + L1Md_A LINE L1 215 5586 -297 1 1188 9046 1 0 0 chrX 79113475 79114471 -87535825 + L1Md_A LINE L1 5587 6582 0 1 1188 409 274 94 55 chrX 79114527 79114728 -87535568 + RLTR12B LTR ERVK 8 216 -312 1 1188 399 56 0 0 chrX 79115065 79115119 -87535177 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 1188 6446 79 18 5 chrX 79115554 79116427 -87533869 + L1_Mus1 LINE L1 5699 6567 0 1 1188 1173 139 36 40 chrX 79116424 79116672 -87533624 + MusHAL1 LINE L1 2042 2288 -424 1 1188 22 35 0 0 chrX 79117007 79117036 -87533260 + AT_rich Low_complexity Low_complexity 1 29 0 1 1188 4501 262 80 13 chrX 79117387 79119925 -87530371 + Lx6 LINE L1 4700 7434 -26 1 1188 5375 38 3 14 chrX 79119925 79120591 -87529705 + L1Md_F2 LINE L1 5911 6569 -13 1 1188 4469 293 118 15 chrX 79120591 79120607 -87529689 + Lx6 LINE L1 7435 7451 -9 1 1188 24 0 0 0 chrX 79120616 79120640 -87529656 + AT_rich Low_complexity Low_complexity 1 24 0 1 1188 484 351 64 27 chrX 79120647 79120943 -87529353 + Lx8 LINE L1 6460 6766 -707 1 1188 280 362 73 25 chrX 79120962 79121166 -87529130 + Lx8 LINE L1 6878 7091 -382 1 1188 312 27 0 0 chrX 79121170 79121207 -87529089 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1188 567 0 0 0 chrX 79121207 79121269 -87529027 + (GA)n Simple_repeat Simple_repeat 1 63 0 1 1188 264 269 14 29 chrX 79121289 79121358 -87528938 - B3 SINE B2 -148 68 1 1 1188 351 0 0 0 chrX 79121413 79121452 -87528844 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1188 647 250 57 23 chrX 79121805 79121981 -87528315 + ORR1D1 LTR MaLR 1 182 -192 1 1188 977 106 0 6 chrX 79122007 79122188 -87528108 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 1188 672 225 9 120 chrX 79122195 79122412 -87527884 + ORR1D1 LTR MaLR 178 370 -4 1 1188 551 329 70 43 chrX 79122485 79122787 -87527509 + RLTR18 LTR ERVK 1 310 -306 1 1188 455 310 43 126 chrX 79122756 79123137 -87527159 + RLTR18 LTR ERVK 138 594 -22 1 1188 180 0 0 0 chrX 79123137 79123157 -87527139 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1188 260 293 20 0 chrX 79123900 79123999 -87526297 + RNERVK23-int LTR ERVK 181 281 -6963 1 1188 284 319 38 54 chrX 79125351 79125590 -87524706 + RNERVK23-int LTR ERVK 1226 1460 -4707 1 1188 352 252 31 31 chrX 79125881 79126008 -87524288 + RNERVK23-int LTR ERVK 1701 1827 -4340 1 1188 1743 310 79 64 chrX 79126419 79127795 -87522501 + RNERVK23-int LTR ERVK 2061 3935 -4282 1 1188 263 316 31 0 chrX 79127820 79127918 -87522378 + RNERVK23-int LTR ERVK 4351 4451 -3766 1 1188 1649 312 42 55 chrX 79127994 79129216 -87521080 + RNERVK23-int LTR ERVK 4111 5731 -2486 1 1188 374 286 22 43 chrX 79129648 79129787 -87520509 + RNERVK23-int LTR ERVK 6193 6328 -1889 1 1188 269 265 0 0 chrX 79130209 79130277 -87520019 + RLTR45-int LTR ERVK 1412 1479 -5765 1 1188 987 307 37 17 chrX 79130810 79131218 -87519078 + RNERVK23-int LTR ERVK 7411 7826 -391 1 1188 234 261 28 28 chrX 79131316 79131387 -87518909 - MLT2C1 LTR ERVL -326 71 1 1 1188 934 286 45 121 chrX 79131387 79131783 -87518513 - ORR1D1 LTR MaLR -7 367 2 1 1188 319 299 62 38 chrX 79131784 79131993 -87518303 - ERVL-B4-int LTR ERVL -3 5711 5498 1 1188 250 229 29 0 chrX 79132024 79132094 -87518202 + (TA)n Simple_repeat Simple_repeat 1 72 0 1 1188 2097 58 0 0 chrX 79132157 79132415 -87517881 - L1_Mus1 LINE L1 -220 5663 5406 1 1188 3188 83 9 0 chrX 79132412 79132843 -87517453 + L1_Mus1 LINE L1 5611 6045 -522 1 1188 13041 128 16 16 chrX 79132851 79135907 -87514389 - L1VL1 LINE L1 -447 3251 194 1 1188 923 285 59 25 chrX 79135937 79136379 -87513917 - L1_Rod LINE L1 -6252 920 464 1 1188 1230 92 144 4 chrX 79136651 79136880 -87513416 + L1Md_A LINE L1 416 676 -6048 1 1188 6916 166 59 9 chrX 79136884 79137721 -87512575 - L1_Mus4 LINE L1 -396 6240 5295 1 1188 4577 96 40 1 chrX 79137721 79138378 -87511918 - L1_Mus2 LINE L1 0 6566 5885 1 1188 6916 181 133 8 chrX 79138378 79139703 -87510593 - L1_Mus4 LINE L1 -589 5294 3765 1 1188 11559 125 2 20 chrX 79139850 79141734 -87508562 - L1Md_F LINE L1 -1087 4796 2948 1 1188 874 212 41 134 chrX 79141739 79142082 -87508214 + RLTRETN_Mm LTR ERVK 12 322 0 1 1188 6082 143 19 63 chrX 79142086 79143267 -87507029 + MMETn-int LTR ERVK 3 1130 -3714 1 1188 2366 144 47 53 chrX 79143288 79143944 -87506352 + MMETn-int LTR ERVK 1730 2187 -2657 1 1188 4079 47 4 8 chrX 79144080 79144591 -87505705 + L1Md_F LINE L1 488 996 -5523 1 1188 899 207 40 88 chrX 79144618 79144915 -87505381 + RLTRETN_Mm LTR ERVK 40 322 0 1 1188 9949 141 34 24 chrX 79144915 79147489 -87502807 - L1Md_F LINE L1 -2930 2953 352 1 1188 4800 151 20 10 chrX 79147489 79148902 -87501394 - L1VL4 LINE L1 -1935 1624 195 1 1188 396 0 0 0 chrX 79149069 79149113 -87501183 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 1 1188 2444 168 29 7 chrX 79149801 79150245 -87500051 - Lx LINE L1 -8 6646 6193 1 1188 4326 151 10 30 chrX 79150246 79151226 -87499070 - Lx LINE L1 -656 5998 5040 1 1188 40 21 0 0 chrX 79152104 79152151 -87498145 + AT_rich Low_complexity Low_complexity 1 47 0 1 1188 935 122 6 17 chrX 79153406 79153581 -87496715 + (GAA)n Simple_repeat Simple_repeat 2 174 0 1 1188 1296 244 69 5 chrX 79153581 79153980 -87496316 + Lx7 LINE L1 5490 5914 -1782 1 1188 820 88 4 17 chrX 79153980 79154112 -87496184 + B1_Mm SINE Alu 13 147 -2 1 1188 183 42 0 0 chrX 79154125 79154149 -87496147 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1188 3205 278 56 22 chrX 79154153 79155185 -87495111 + Lx7 LINE L1 5922 6988 -708 1 1188 1061 287 23 71 chrX 79155189 79155583 -87494713 + ORR1C1 LTR MaLR 1 375 -3 1 1188 988 278 164 2 chrX 79155586 79156082 -87494214 + ORR1C1-int LTR MaLR 1 576 -933 1 1188 816 241 15 30 chrX 79156086 79156287 -87494009 - MTB_Mm LTR MaLR -209 198 1 1 1188 490 137 10 10 chrX 79156455 79156551 -87493745 + (TA)n Simple_repeat Simple_repeat 2 97 0 1 1188 327 160 0 0 chrX 79156730 79156805 -87493491 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 1188 3276 43 2 0 chrX 79156805 79157200 -87493096 + MTA_Mm LTR MaLR 1 396 0 1 1188 9160 27 6 5 chrX 79157200 79158297 -87491999 + MTA_Mm-int LTR MaLR 1 1098 0 1 1188 3304 48 0 0 chrX 79158297 79158693 -87491603 + MTA_Mm LTR MaLR 1 396 0 1 1188 198 103 0 0 chrX 79158693 79158722 -87491574 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 1188 192 97 0 0 chrX 79159828 79159859 -87490437 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 1 1188 227 214 14 14 chrX 79160316 79160387 -87489909 + T-rich Low_complexity Low_complexity 4 74 0 1 1188 25 75 0 0 chrX 79160909 79160962 -87489334 + AT_rich Low_complexity Low_complexity 1 53 0 1 1188 438 69 0 0 chrX 79161195 79161253 -87489043 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 1188 1113 355 91 19 chrX 79161253 79162001 -87488295 - Lx8 LINE L1 -144 7329 6528 1 1188 1398 187 142 94 chrX 79163631 79164181 -87486115 + RMER6C LTR ERVK 1 690 0 1 1188 3272 69 35 11 chrX 79164775 79165229 -87485067 - L1Md_F2 LINE L1 -1 6581 6117 1 148 2446 239 72 65 chrX 79167375 79168068 -87482228 + Lx5 LINE L1 6353 7050 0 1 1189 3517 136 10 0 chrX 79168473 79169199 -87481097 - L1_Mus4 LINE L1 -655 5981 5244 1 1189 4123 140 5 1 chrX 79169199 79169849 -87480447 + L1_Mus4 LINE L1 5978 6629 -7 1 1189 814 303 64 69 chrX 79169953 79170343 -87479953 - MER31A LTR ERV1 -20 465 78 1 1189 478 327 7 13 chrX 79170346 79170498 -87479798 + RSINE1 SINE B4 5 155 -10 1 1189 227 95 48 0 chrX 79170505 79170547 -87479749 + (CATA)n Simple_repeat Simple_repeat 4 47 0 1 1189 369 0 0 0 chrX 79171387 79171428 -87478868 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1189 189 0 0 0 chrX 79171784 79171805 -87478491 + (TTG)n Simple_repeat Simple_repeat 2 22 0 1 1189 279 243 2 0 chrX 79171986 79172055 -87478241 - L1_Mur3 LINE L1 -464 5416 5332 1 1189 607 331 165 6 chrX 79172054 79172364 -87477932 + Lx8 LINE L1 6540 6898 -575 1 1189 21 36 0 0 chrX 79172458 79172486 -87477810 + AT_rich Low_complexity Low_complexity 1 28 0 1 1189 24 91 0 0 chrX 79173276 79173342 -87476954 + AT_rich Low_complexity Low_complexity 1 66 0 1 1189 360 0 0 0 chrX 79173599 79173639 -87476657 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1189 851 213 16 32 chrX 79173794 79173983 -87476313 + Lx4A LINE L1 6873 7058 0 1 1189 419 337 71 64 chrX 79174113 79174395 -87475901 + L1M2 LINE L1 3977 4260 -1883 1 1189 576 142 33 8 chrX 79174904 79175025 -87475271 + L1_Mus4 LINE L1 6513 6636 0 1 1189 278 265 15 0 chrX 79175634 79175702 -87474594 + GA-rich Low_complexity Low_complexity 4 72 0 1 1189 372 43 0 0 chrX 79175705 79175751 -87474545 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 1189 898 136 78 17 chrX 79176042 79176222 -87474074 - Lx3A LINE L1 -6 6975 6785 1 1189 2014 149 21 6 chrX 79176222 79176560 -87473736 - Lx3A LINE L1 -376 6605 6263 1 1189 634 310 97 55 chrX 79176669 79177031 -87473265 - MTEb LTR MaLR -1 378 2 1 1189 253 278 64 64 chrX 79177276 79177464 -87472832 + ERVL-E-int LTR ERVL 3844 4031 -1683 1 1189 277 303 77 48 chrX 79177526 79177630 -87472666 + ERVL-E-int LTR ERVL 4098 4204 -1463 1 1189 286 209 67 99 chrX 79178089 79178136 -87472160 + RMER17D2 LTR ERVK 249 306 -503 2 1189 195 42 0 0 chrX 79178136 79178160 -87472136 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 2 1189 286 209 67 99 chrX 79178160 79178321 -87471975 + RMER17D2 LTR ERVK 307 451 -358 2 1189 198 103 0 0 chrX 79178321 79178350 -87471946 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1189 286 209 67 99 chrX 79178350 79178363 -87471933 + RMER17D2 LTR ERVK 452 463 -346 2 1189 246 105 0 0 chrX 79178543 79178581 -87471715 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1189 1546 246 41 8 chrX 79178636 79179153 -87471143 + L1_Mur3 LINE L1 2044 2577 -3303 2 1189 4892 123 14 60 chrX 79179157 79179938 -87470358 + L1VL1 LINE L1 195 947 -5475 2 1189 876 102 99 31 chrX 79179938 79180100 -87470196 + L1Md_F2 LINE L1 6410 6582 0 2 1189 4892 123 14 60 chrX 79180100 79180156 -87470140 + L1VL1 LINE L1 948 993 -5429 2 1189 255 283 42 42 chrX 79180144 79180240 -87470056 + L1VL1 LINE L1 300 395 -6027 2 1189 467 268 164 19 chrX 79180280 79180475 -87469821 + L1_Mus3 LINE L1 495 806 -5813 2 1189 28271 135 9 10 chrX 79180479 79186413 -87463883 + L1_Mus3 LINE L1 725 6641 0 2 1189 995 228 101 34 chrX 79186438 79186796 -87463500 + L1_Mur3 LINE L1 2597 2978 -2902 2 1189 1372 270 20 0 chrX 79186797 79187101 -87463195 + Lx5 LINE L1 6599 6908 -142 2 1189 25 0 0 0 chrX 79187128 79187153 -87463143 + AT_rich Low_complexity Low_complexity 1 25 0 2 1189 251 222 11 32 chrX 79187156 79187249 -87463047 + (TA)n Simple_repeat Simple_repeat 1 91 0 2 1189 29 78 0 0 chrX 79189433 79189497 -87460799 + AT_rich Low_complexity Low_complexity 1 64 0 2 1189 422 343 121 53 chrX 79189994 79190333 -87459963 - ORR1D2 LTR MaLR -8 362 1 2 1189 1367 307 31 92 chrX 79190413 79190721 -87459575 - ORR1D2-int LTR MaLR -417 953 665 2 1189 414 57 0 0 chrX 79190721 79190774 -87459522 + (TTTG)n Simple_repeat Simple_repeat 1 53 0 2 1189 1367 307 31 92 chrX 79190774 79191075 -87459221 - ORR1D2-int LTR MaLR -706 664 381 2 1189 186 43 0 0 chrX 79191657 79191680 -87458616 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1189 240 200 0 0 chrX 79192046 79192101 -87458195 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 1189 1143 320 53 131 chrX 79192666 79193084 -87457212 - RMER1C Other Other -5 1337 928 2 1189 7025 135 23 16 chrX 79193084 79194289 -87456007 - Lx3A LINE L1 -3 6978 5765 2 1189 1753 319 32 51 chrX 79194289 79194978 -87455318 - RMER1C Other Other -292 1050 374 2 1189 1459 242 35 0 chrX 79194979 79195322 -87454974 - L1_Mur2 LINE L1 -104 5773 5419 2 1189 2615 209 71 8 chrX 79195323 79196029 -87454267 + L1_Mur3 LINE L1 3610 4422 -1464 2 1189 395 81 0 0 chrX 79196001 79196063 -87454233 + MusHAL1 LINE L1 627 688 -2666 2 1189 2460 79 17 6 chrX 79196054 79196399 -87453897 - L1_Mus1 LINE L1 -547 6020 5672 2 1189 3304 69 49 0 chrX 79196399 79196846 -87453450 + L1_Mus1 LINE L1 6099 6567 0 2 1189 8095 119 17 7 chrX 79196850 79198213 -87452083 + MusHAL1 LINE L1 675 2050 -1303 2 1189 3834 103 77 2 chrX 79198213 79198808 -87451488 + L1_Mus2 LINE L1 5927 6566 0 2 1189 267 79 0 0 chrX 79199302 79199340 -87450956 + (GA)n Simple_repeat Simple_repeat 1 38 0 2 1189 180 0 0 0 chrX 79199342 79199362 -87450934 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 1189 5059 169 11 2 chrX 79199370 79200242 -87450054 - Lx2 LINE L1 -23 6974 6095 2 1189 381 95 0 0 chrX 79200355 79200418 -87449878 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 2 1189 1255 164 30 0 chrX 79200708 79200939 -87449357 - Lx2A1 LINE L1 -6 7002 6765 2 1189 2980 50 16 0 chrX 79201725 79202107 -87448189 + L1_Mus3 LINE L1 5645 6032 -606 2 1189 487 277 42 32 chrX 79202493 79202683 -87447613 + Lx9 LINE L1 7256 7447 -197 2 1189 4086 54 0 4 chrX 79202741 79203258 -87447038 + L1Md_F2 LINE L1 6068 6582 0 2 1189 21 36 0 0 chrX 79203778 79203806 -87446490 + AT_rich Low_complexity Low_complexity 1 28 0 2 1189 299 330 122 37 chrX 79203965 79204317 -87445979 - L1MA9 LINE L1 -157 6155 5774 2 1189 569 281 32 19 chrX 79204336 79204492 -87445804 + MTD LTR MaLR 41 198 -221 2 1189 1251 59 6 0 chrX 79204493 79204662 -87445634 + L1Md_F2 LINE L1 6402 6571 -11 2 1189 28 86 0 0 chrX 79205345 79205415 -87444881 + AT_rich Low_complexity Low_complexity 1 70 0 2 1189 21489 80 4 3 chrX 79205611 79209267 -87441029 - L1Md_F2 LINE L1 -1 6581 2920 2 1189 2935 98 0 0 chrX 79209264 79209683 -87440613 + L1Md_F2 LINE L1 2473 2891 -2992 2 1189 1701 156 8 62 chrX 79209683 79209735 -87440561 - Lx LINE L1 0 6654 6610 2 1189 3005 63 105 2 chrX 79209735 79210165 -87440131 + IAPLTR2_Mm LTR ERVK 1 474 -1 2 1189 1701 156 8 62 chrX 79210165 79210468 -87439828 - Lx LINE L1 -45 6609 6318 2 1189 2299 75 3 0 chrX 79210469 79210774 -87439522 - Lx LINE L1 -762 5892 5587 2 1189 617 61 0 5 chrX 79210791 79210882 -87439414 - Lx LINE L1 -744 5910 5823 2 1189 2252 203 28 28 chrX 79211602 79212130 -87438166 - RLTR12B LTR ERVK 0 528 1 2 1189 441 336 36 14 chrX 79212130 79212269 -87438027 + RSINE1 SINE B4 11 152 -13 2 1189 546 16 0 0 chrX 79212279 79212342 -87437954 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 2 1189 1340 208 104 0 chrX 79212615 79212894 -87437402 - Lx5 LINE L1 -2 7048 6741 2 1189 33 56 0 0 chrX 79212914 79212968 -87437328 + AT_rich Low_complexity Low_complexity 1 54 0 2 1189 198 0 0 0 chrX 79213214 79213236 -87437060 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1189 704 201 12 0 chrX 79213359 79213523 -87436773 + (CATA)n Simple_repeat Simple_repeat 2 167 0 2 1189 399 82 41 0 chrX 79213638 79213711 -87436585 + (TC)n Simple_repeat Simple_repeat 1 76 0 2 1189 641 281 101 56 chrX 79213852 79214798 -87435498 + L1_Mur3 LINE L1 4280 5227 -620 2 1189 740 368 78 24 chrX 79214826 79215361 -87434935 + Lx8 LINE L1 6671 7234 -239 2 1189 5634 45 1 0 chrX 79215407 79216090 -87434206 - L1Md_T LINE L1 0 6582 5899 2 1189 3673 25 0 0 chrX 79216090 79216537 -87433759 + L1_Mm LINE L1 2943 3389 -2494 2 1189 363 44 0 0 chrX 79216585 79216630 -87433666 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 1189 447 19 0 0 chrX 79216630 79216681 -87433615 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1189 252 226 242 0 chrX 79217067 79217191 -87433105 + Lx9 LINE L1 7490 7643 -1 2 1189 534 293 35 0 chrX 79217481 79217655 -87432641 + MER82 DNA MER2_type 64 243 -410 2 1189 501 84 0 0 chrX 79217872 79217943 -87432353 + (TG)n Simple_repeat Simple_repeat 1 71 0 2 1189 196 53 53 0 chrX 79218020 79218058 -87432238 + (TATAA)n Simple_repeat Simple_repeat 5 44 0 2 1189 787 248 75 15 chrX 79218058 79218218 -87432078 - Lx6 LINE L1 -14 7446 7278 2 1189 243 0 0 0 chrX 79218218 79218245 -87432051 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1189 787 248 75 15 chrX 79218245 79218350 -87431946 - Lx6 LINE L1 -183 7277 7166 2 1189 369 0 0 0 chrX 79218414 79218455 -87431841 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1189 1758 194 57 46 chrX 79218545 79218896 -87431400 - ORR1B2 LTR MaLR -8 359 5 2 1189 219 364 50 17 chrX 79219382 79219502 -87430794 - MIRb SINE MIR -120 148 25 2 1189 596 339 13 22 chrX 79220248 79220474 -87429822 - LTR86A1 LTR ERVL -12 501 278 2 1189 234 0 0 0 chrX 79220631 79220657 -87429639 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2 1189 545 262 46 17 chrX 79221146 79221321 -87428975 + Lx6 LINE L1 7277 7456 -4 2 1189 195 114 0 0 chrX 79221407 79221442 -87428854 + (TTGG)n Simple_repeat Simple_repeat 1 35 0 2 1189 479 357 29 6 chrX 79221450 79221622 -87428674 - B3 SINE B2 -27 189 14 2 1189 552 260 16 8 chrX 79221709 79221833 -87428463 - B3A SINE B2 -61 137 13 2 1189 1718 304 82 24 chrX 79222155 79223556 -87426740 + MERVL_2A-int LTR ERVL 666 2223 -3538 2 1189 1591 321 56 14 chrX 79223552 79224174 -87426122 + MERVL_2A-int LTR ERVL 4764 5411 -350 2 1189 2773 306 94 15 chrX 79224192 79225359 -87424937 + Lx7 LINE L1 6062 7331 -142 2 1189 486 0 0 0 chrX 79225359 79225413 -87424883 + (TC)n Simple_repeat Simple_repeat 2 55 0 2 1189 423 0 0 0 chrX 79225413 79225459 -87424837 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1189 1800 329 119 28 chrX 79225459 79225580 -87424716 + Lx7 LINE L1 7332 7468 -5 2 1189 447 68 0 0 chrX 79225650 79225709 -87424587 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 1189 411 168 42 0 chrX 79225795 79225890 -87424406 + MERVL_2A-int LTR ERVL 5625 5723 -38 2 1189 670 299 168 6 chrX 79225903 79226219 -87424077 + ORR1D2 LTR MaLR 1 367 -3 2 1189 1295 302 39 14 chrX 79226242 79226758 -87423538 + MT2A LTR ERVL 3 531 -2 2 1189 38465 6 0 0 chrX 79227512 79233098 -87417198 + L1Md_A LINE L1 1 5586 -297 2 1189 9046 1 0 0 chrX 79233098 79234094 -87416202 + L1Md_A LINE L1 5587 6582 0 2 1189 373 350 60 0 chrX 79234107 79234307 -87415989 - B3 SINE B2 -2 214 3 2 1189 195 42 0 0 chrX 79235039 79235063 -87415233 + (TA)n Simple_repeat Simple_repeat 2 25 0 2 1189 4885 132 74 9 chrX 79236018 79236758 -87413538 - Lx LINE L1 0 6638 5785 2 1189 4921 45 14 9 chrX 79236758 79237393 -87412903 - L1Md_F3 LINE L1 0 6584 5947 2 1189 4885 142 56 12 chrX 79237393 79237774 -87412522 - Lx LINE L1 -98 5785 5384 2 1189 2264 158 35 0 chrX 79237746 79238152 -87412144 - L1_Mur2 LINE L1 -1721 4156 3737 2 1189 304 261 0 0 chrX 79238152 79238221 -87412075 + tRNA-Gly-GGY tRNA tRNA 1 69 -5 2 1189 21 0 0 0 chrX 79240472 79240493 -87409803 + AT_rich Low_complexity Low_complexity 1 21 0 2 1189 437 76 15 0 chrX 79240758 79240824 -87409472 + (TA)n Simple_repeat Simple_repeat 1 67 0 2 1189 384 22 0 0 chrX 79240825 79240870 -87409426 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 1189 453 288 29 0 chrX 79240878 79241017 -87409279 - Lx9 LINE L1 -180 7464 7322 2 1189 14234 86 2 0 chrX 79241238 79243207 -87407089 - L1_Mm LINE L1 -1851 4032 2060 2 1189 1383 213 224 10 chrX 79243196 79243594 -87406702 + Lx2B LINE L1 6398 6880 -120 2 1189 276 264 85 7 chrX 79244250 79244391 -87405905 - BLACKJACK DNA AcHobo -391 2553 2402 2 1189 27 0 0 0 chrX 79244746 79244773 -87405523 + AT_rich Low_complexity Low_complexity 1 27 0 2 1189 307 283 14 61 chrX 79244802 79244949 -87405347 - L1M5 LINE L1 -732 5432 5293 2 1189 359 85 0 0 chrX 79245066 79245125 -87405171 - Lx2B LINE L1 -1 6999 6941 2 1189 1009 140 13 0 chrX 79245125 79245275 -87405021 + Lx2B LINE L1 6669 6820 -180 2 1189 685 362 43 4 chrX 79245486 79245741 -87404555 + B4 SINE B4 2 266 -26 2 1189 393 133 17 34 chrX 79245813 79245930 -87404366 + (CAGA)n Simple_repeat Simple_repeat 2 116 0 2 1189 366 23 0 0 chrX 79246029 79246072 -87404224 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1189 4036 67 2 6 chrX 79246582 79247107 -87403189 - L1Md_F2 LINE L1 -12 6570 6048 2 1189 333 0 0 0 chrX 79247283 79247320 -87402976 + (A)n Simple_repeat Simple_repeat 1 37 0 3 1189 4189 220 26 61 chrX 79247336 79248596 -87401700 + L1_Mur3 LINE L1 876 2085 -3795 3 1189 180 0 0 0 chrX 79248596 79248616 -87401680 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1189 4189 211 28 24 chrX 79248616 79248960 -87401336 + L1_Mur3 LINE L1 2086 2420 -3460 3 1189 6246 201 57 9 chrX 79248972 79250632 -87399664 - Lx5 LINE L1 -6 7044 5287 3 1189 819 277 5 16 chrX 79250630 79250887 -87399409 + L1_Mur3 LINE L1 2394 2643 -3240 3 1189 2325 241 15 26 chrX 79250874 79251560 -87398736 + L1_Mur3 LINE L1 3615 4292 -1588 3 1189 10540 195 158 37 chrX 79251566 79254342 -87395954 + Lx LINE L1 356 3739 -2144 3 1189 246 32 0 0 chrX 79254342 79254373 -87395923 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1189 10540 206 253 16 chrX 79254373 79255533 -87394763 + Lx LINE L1 3740 4890 -993 3 1189 501 17 0 0 chrX 79255533 79255591 -87394705 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 3 1189 10540 197 94 20 chrX 79255591 79257091 -87393205 + Lx LINE L1 4891 6641 -356 3 1189 1178 171 5 5 chrX 79257093 79257310 -87392986 + Lx LINE L1 6775 6991 -6 3 1189 947 206 12 0 chrX 79257327 79257497 -87392799 + MTC LTR MaLR 196 367 -54 3 1189 297 0 0 0 chrX 79257499 79257532 -87392764 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 3 1189 1720 246 8 23 chrX 79257555 79258038 -87392258 + L1_Mur3 LINE L1 4321 4796 -1084 3 1189 363 258 10 20 chrX 79258038 79258137 -87392159 + RLTR25B LTR ERVK 4 101 -927 3 1189 835 94 29 0 chrX 79258137 79258303 -87391993 + L1_Mus3 LINE L1 6488 6638 0 3 1189 1049 276 94 30 chrX 79258303 79258590 -87391706 + RLTR25B LTR ERVK 576 888 -140 3 1189 234 0 0 0 chrX 79258590 79258616 -87391680 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 3 1189 1049 276 94 30 chrX 79258616 79258754 -87391542 + RLTR25B LTR ERVK 889 1028 0 3 1189 6762 89 32 36 chrX 79258918 79260075 -87390221 - L1_Mus2 LINE L1 0 6654 5424 3 1189 1114 323 84 30 chrX 79260055 79260727 -87389569 + Lx5 LINE L1 6453 7050 0 3 1189 4218 77 14 0 chrX 79261427 79261997 -87388299 - L1_Mus1 LINE L1 0 6567 5990 3 1189 1330 257 48 3 chrX 79262174 79262486 -87387810 + MTE2a LTR MaLR 1 326 -53 3 1189 793 41 8 69 chrX 79262499 79262630 -87387666 - L1Md_F3 LINE L1 -12 6572 6450 3 1189 1093 224 4 0 chrX 79262734 79262975 -87387321 + Lx7 LINE L1 3752 3993 -1887 3 1189 4088 215 43 1 chrX 79263007 79263963 -87386333 + Lx7 LINE L1 4784 5817 -2065 3 1189 22 0 0 0 chrX 79263967 79263989 -87386307 + AT_rich Low_complexity Low_complexity 1 22 0 3 1189 829 234 74 19 chrX 79263992 79264262 -87386034 + Lx7 LINE L1 7412 7696 0 3 1189 219 189 0 0 chrX 79264298 79264351 -87385945 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1189 25 0 0 0 chrX 79264458 79264483 -87385813 + AT_rich Low_complexity Low_complexity 1 25 0 3 1189 21 36 0 0 chrX 79264628 79264656 -87385640 + AT_rich Low_complexity Low_complexity 1 28 0 3 1189 221 185 0 15 chrX 79265232 79265298 -87384998 + GA-rich Low_complexity Low_complexity 1 65 0 3 1189 43 35 0 0 chrX 79265400 79265457 -87384839 + AT_rich Low_complexity Low_complexity 1 57 0 3 1189 414 326 63 119 chrX 79266177 79266571 -87383725 - MTE2a LTR MaLR -5 374 3 3 1189 1005 266 68 32 chrX 79266941 79267294 -87383002 - ORR1D1 LTR MaLR 0 374 14 3 1189 25 31 0 0 chrX 79267408 79267440 -87382856 + AT_rich Low_complexity Low_complexity 1 32 0 3 1189 22 0 0 0 chrX 79268668 79268690 -87381606 + AT_rich Low_complexity Low_complexity 1 22 0 3 1189 1289 271 3 66 chrX 79268735 79268874 -87381422 - MERVK26-int LTR ERVK -5013 1906 1780 3 1189 3243 111 6 14 chrX 79268874 79269205 -87381091 + L1_Mus2 LINE L1 6077 6407 -159 3 1189 2832 72 53 8 chrX 79269205 79269584 -87380712 + MTA_Mm LTR MaLR 1 396 0 3 1189 3243 111 6 14 chrX 79269584 79269746 -87380550 + L1_Mus2 LINE L1 6408 6566 0 3 1189 1289 271 3 66 chrX 79269746 79269954 -87380342 - MERVK26-int LTR ERVK -5140 1779 1581 3 1189 523 266 100 46 chrX 79269954 79270194 -87380102 - MERVK26-int LTR ERVK -5479 1440 1188 3 1189 933 259 52 0 chrX 79270249 79270481 -87379815 - MERVK26-int LTR ERVK -6144 775 532 3 1189 8217 158 33 7 chrX 79270524 79273105 -87377191 - Lx2A1 LINE L1 -8 7000 4349 3 1189 4419 185 7 55 chrX 79273100 79274071 -87376225 + Lx2A1 LINE L1 3410 4334 -1543 3 1189 422 288 27 38 chrX 79274087 79274271 -87376025 - MERVK26-int LTR ERVK -6419 500 319 3 1189 324 70 0 0 chrX 79274302 79274345 -87375951 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 3 1189 3046 82 149 0 chrX 79274372 79274872 -87375424 - L1_Mus1 LINE L1 -403 6164 5573 3 1189 3045 80 0 2 chrX 79274873 79275274 -87375022 + L1_Mus1 LINE L1 6167 6566 -1 3 1189 873 76 0 0 chrX 79275285 79275403 -87374893 + (GAAA)n Simple_repeat Simple_repeat 2 119 0 3 1189 624 298 39 6 chrX 79275404 79275583 -87374713 - MERVK26-int LTR ERVK -6666 253 69 3 1189 955 276 186 12 chrX 79275661 79275984 -87374312 - RMER20B LTR ERVK -15 612 234 3 1189 936 51 0 0 chrX 79276090 79276208 -87374088 + (TTC)n Simple_repeat Simple_repeat 3 120 0 3 1189 1975 55 16 0 chrX 79276210 79276465 -87373831 - L1_Mus1 LINE L1 -12 6555 6297 3 1189 529 74 36 18 chrX 79276568 79276678 -87373618 + (TCTA)n Simple_repeat Simple_repeat 2 113 0 3 1189 1588 229 13 85 chrX 79276949 79277336 -87372960 + ORR1B2 LTR MaLR 1 359 -8 3 1189 342 245 0 41 chrX 79277340 79277438 -87372858 + ORR1B2-int LTR MaLR 1 94 -1698 3 1189 2795 237 57 27 chrX 79277444 79278220 -87372076 + ORR1B2-int LTR MaLR 707 1505 -4 3 1189 509 222 29 29 chrX 79278244 79278383 -87371913 + RLTR15 LTR ERVK 1 139 -220 3 1189 22906 64 23 5 chrX 79278408 79282175 -87368121 - L1Md_F LINE L1 -1799 4084 292 3 1189 10837 24 1 0 chrX 79282176 79283451 -87366845 + L1Md_T LINE L1 4311 5586 -297 3 1189 8017 56 0 0 chrX 79283451 79284447 -87365849 + L1Md_T LINE L1 5587 6582 0 3 1189 23 54 0 0 chrX 79284560 79284597 -87365699 + AT_rich Low_complexity Low_complexity 1 37 0 3 1189 583 291 225 0 chrX 79284640 79284911 -87365385 - Lx9 LINE L1 -50 7594 7263 3 1189 34919 70 2 4 chrX 79285449 79291047 -87359249 + L1Md_F2 LINE L1 298 5978 -607 3 1189 3804 76 2 4 chrX 79291051 79291554 -87358742 + L1Md_F2 LINE L1 6083 6584 -1 3 1189 22 0 0 0 chrX 79291668 79291690 -87358606 + AT_rich Low_complexity Low_complexity 1 22 0 3 1189 28 29 0 0 chrX 79291751 79291786 -87358510 + AT_rich Low_complexity Low_complexity 1 35 0 3 1189 21 36 0 0 chrX 79292024 79292052 -87358244 + AT_rich Low_complexity Low_complexity 1 28 0 3 1189 252 218 102 11 chrX 79292141 79292229 -87358067 + L1VL1 LINE L1 401 496 -5926 3 1189 8002 149 43 7 chrX 79292243 79294229 -87356067 + L1Md_F LINE L1 553 2612 -3271 3 1189 4369 91 35 6 chrX 79294230 79294852 -87355444 + L1_Mus2 LINE L1 5927 6566 0 3 1189 22 0 0 0 chrX 79295113 79295135 -87355161 + AT_rich Low_complexity Low_complexity 1 22 0 3 1189 249 303 55 100 chrX 79295185 79295456 -87354840 - RMER12 LTR ERVK -360 962 704 3 1189 255 149 21 0 chrX 79295690 79295737 -87354559 - MTD LTR MaLR -17 402 355 3 1189 2695 77 52 3 chrX 79296578 79296945 -87353351 + L1_Mus2 LINE L1 6182 6566 0 3 1189 187 288 95 14 chrX 79297050 79297124 -87353172 + L4 LINE RTE 174 253 -1776 3 1189 700 256 48 22 chrX 79297223 79297555 -87352741 - MTD LTR MaLR 0 419 8 3 1189 45 16 0 16 chrX 79298235 79298264 -87352032 + AT_rich Low_complexity Low_complexity 1 29 0 3 1189 963 101 58 0 chrX 79298264 79298403 -87351893 - B1_Mm SINE Alu 0 147 1 3 1189 45 16 0 16 chrX 79298403 79298436 -87351860 + AT_rich Low_complexity Low_complexity 1 33 0 3 1190 1789 211 77 0 chrX 79299014 79299402 -87350894 + MTC LTR MaLR 1 418 -3 3 1190 618 194 8 8 chrX 79300203 79300328 -87349968 - B1_Mur4 SINE Alu -7 143 19 3 1190 3460 15 5 0 chrX 79300328 79300722 -87349574 + MTA_Mm LTR MaLR 1 396 0 3 1190 9076 34 4 1 chrX 79300722 79301817 -87348479 + MTA_Mm-int LTR MaLR 1 1098 0 3 1190 3460 15 5 0 chrX 79301817 79302211 -87348085 + MTA_Mm LTR MaLR 1 396 0 3 1190 600 216 7 61 chrX 79302211 79302231 -87348065 - B1_Mur3 SINE Alu -127 22 5 3 1190 21 36 0 0 chrX 79302316 79302344 -87347952 + AT_rich Low_complexity Low_complexity 1 28 0 3 1190 3041 66 2 8 chrX 79302570 79302968 -87347328 + MTA_Mm LTR MaLR 1 396 0 3 1190 7886 81 13 4 chrX 79302968 79304056 -87346240 + MTA_Mm-int LTR MaLR 1 1098 0 3 1190 3283 43 2 5 chrX 79304056 79304453 -87345843 + MTA_Mm LTR MaLR 1 396 0 3 1190 1641 107 95 0 chrX 79304711 79304963 -87345333 - ORR1A2 LTR MaLR -51 276 1 3 1190 486 338 7 21 chrX 79305792 79305934 -87344362 + B1_Mur2 SINE Alu 9 148 -1 3 1190 2262 185 10 27 chrX 79306436 79306919 -87343377 - L1_Mur2 LINE L1 -232 5645 5171 3 1190 465 186 50 17 chrX 79306919 79307039 -87343257 + ORR1A2 LTR MaLR 1 124 -222 3 1190 6244 163 31 38 chrX 79307043 79308191 -87342105 + ORR1A2-int LTR MaLR 721 1903 -60 3 1190 1123 69 7 0 chrX 79308191 79308336 -87341960 + B1_Mus2 SINE Alu 2 147 0 3 1190 6244 163 31 38 chrX 79308336 79308439 -87341857 + ORR1A2-int LTR MaLR 1904 1963 0 3 1190 1667 145 91 3 chrX 79308442 79308740 -87341556 + ORR1A2 LTR MaLR 4 327 0 3 1190 3440 205 32 8 chrX 79308741 79309489 -87340807 - L1_Mur2 LINE L1 -703 5174 4409 3 1190 7387 174 35 6 chrX 79309487 79310603 -87339693 + Lx4A LINE L1 5667 6811 -247 3 1190 360 0 0 0 chrX 79310603 79310643 -87339653 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1190 7387 174 35 6 chrX 79310643 79310876 -87339420 + Lx4A LINE L1 6812 7054 -4 3 1190 5526 225 31 18 chrX 79310890 79312130 -87338166 + Lx5 LINE L1 5781 7036 -14 3 1190 306 0 0 0 chrX 79312130 79312164 -87338132 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 3 1190 394 308 133 19 chrX 79312187 79312458 -87337838 + L1M4 LINE L1 4630 4931 -1215 3 1190 21 0 0 0 chrX 79312831 79312852 -87337444 + AT_rich Low_complexity Low_complexity 1 21 0 3 1190 21 36 0 0 chrX 79312986 79313014 -87337282 + AT_rich Low_complexity Low_complexity 1 28 0 3 1190 454 267 74 0 chrX 79313024 79313159 -87337137 - Lx3B LINE L1 -1 6972 6828 3 1190 552 217 96 64 chrX 79313779 79313966 -87336330 + RMER1C Other Other 1136 1328 -14 3 1190 24 0 0 0 chrX 79314605 79314629 -87335667 + GC_rich Low_complexity Low_complexity 1 24 0 3 1190 2857 218 67 10 chrX 79314672 79315692 -87334604 + L1_Mur3 LINE L1 894 2033 -3844 3 1190 1530 160 102 0 chrX 79315694 79315987 -87334309 + RMER6D LTR ERVK 1 323 -397 3 1190 1663 204 8 22 chrX 79315987 79316344 -87333952 - L1_Mur1 LINE L1 -259 5627 5276 3 1190 593 276 33 47 chrX 79316358 79316597 -87333699 + Lx2B LINE L1 6772 7056 -2 3 1190 897 83 14 7 chrX 79316608 79316754 -87333542 + (GAA)n Simple_repeat Simple_repeat 2 148 0 3 1190 394 259 0 0 chrX 79316789 79316874 -87333422 + RMER6D LTR ERVK 367 451 -269 3 1190 2099 228 33 5 chrX 79316895 79317477 -87332819 + L1_Mur3 LINE L1 2644 3241 -2636 3 1190 1256 209 122 0 chrX 79317479 79317732 -87332564 + RLTR25A LTR ERVK 14 297 -806 3 1190 4288 74 0 2 chrX 79317732 79318551 -87331745 - L1Md_F2 LINE L1 -446 6136 5321 3 1190 1891 86 17 24 chrX 79318551 79318838 -87331458 + L1Md_F2 LINE L1 6298 6582 0 3 1190 1730 190 70 23 chrX 79318838 79319047 -87331249 + RLTR25A LTR ERVK 286 512 -591 3 1190 186 43 0 0 chrX 79319047 79319070 -87331226 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 1190 1730 190 70 23 chrX 79319070 79319247 -87331049 + RLTR25A LTR ERVK 513 689 -414 3 1190 235 210 48 39 chrX 79319577 79319681 -87330615 - Lx8 LINE L1 -10 7463 7359 3 1190 399 21 0 0 chrX 79319749 79319797 -87330499 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1190 36 87 0 0 chrX 79319898 79319990 -87330306 + AT_rich Low_complexity Low_complexity 1 92 0 3 1190 1080 186 138 46 chrX 79320892 79321196 -87329100 + IAPEY3_LTR LTR ERVK 1 332 0 3 1190 378 259 43 71 chrX 79321202 79321343 -87328953 + IAPEY3-int LTR ERVK 7 143 -7537 3 1190 752 186 57 24 chrX 79321394 79321603 -87328693 + IAPEY3-int LTR ERVK 535 750 -6930 3 1190 590 60 55 82 chrX 79321617 79321800 -87328496 + GA-rich Low_complexity Low_complexity 3 180 0 3 1190 500 141 0 23 chrX 79321804 79321891 -87328405 + MMERVK10C-int LTR ERVK 93 177 -6365 3 1190 741 204 7 7 chrX 79321885 79322038 -87328258 + MMERVK10C-int LTR ERVK 347 499 -6043 3 1190 1867 139 8 0 chrX 79322042 79322339 -87327957 + MMERVK10C-int LTR ERVK 5414 5699 -1882 3 1190 2407 170 7 1 chrX 79322358 79322806 -87327490 + MMERVK10C-int LTR ERVK 6849 7338 -342 3 1190 1356 205 58 15 chrX 79322823 79323165 -87327131 + IAPEz-int LTR ERVK 6125 6481 0 3 1190 1089 192 135 43 chrX 79323165 79323469 -87326827 + IAPEY3_LTR LTR ERVK 1 332 0 3 1190 546 346 32 14 chrX 79323935 79324155 -87326141 - MTEb LTR MaLR 0 379 156 3 1190 1181 339 81 14 chrX 79324242 79324810 -87325486 - Lx8 LINE L1 -310 7163 6558 3 1190 22 0 0 0 chrX 79325037 79325059 -87325237 + AT_rich Low_complexity Low_complexity 1 22 0 3 1190 32 0 0 0 chrX 79325191 79325223 -87325073 + AT_rich Low_complexity Low_complexity 1 32 0 4 1190 252 215 154 0 chrX 79325862 79325927 -87324369 - ORR1A3 LTR MaLR 0 326 252 4 1190 234 0 0 0 chrX 79325933 79325959 -87324337 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 4 1190 17016 122 24 7 chrX 79325959 79327638 -87322658 - Lx3_Mus LINE L1 -23 6986 5284 4 1190 366 23 0 0 chrX 79327638 79327681 -87322615 + (TTG)n Simple_repeat Simple_repeat 2 44 0 4 1190 17016 109 22 6 chrX 79327681 79329714 -87320582 - Lx3_Mus LINE L1 -603 5283 3210 4 1190 4389 16 0 0 chrX 79329715 79330208 -87320088 - MT2_Mm LTR ERVL 0 493 1 4 1190 314 0 0 0 chrX 79330208 79330246 -87320050 - MERVL-int LTR ERVL 0 5485 5448 4 1190 392 167 46 35 chrX 79330246 79330333 -87319963 - ORR1A3-int LTR MaLR -1323 640 553 4 1190 32944 17 1 0 chrX 79330333 79335691 -87314605 - MERVL-int LTR ERVL -125 5360 1 4 1190 4320 22 0 0 chrX 79335691 79336184 -87314112 - MT2_Mm LTR ERVL 0 493 1 4 1190 1698 111 0 4 chrX 79336184 79336456 -87313840 - L1_Mur1 LINE L1 -2674 3212 2942 4 1190 2441 139 5 0 chrX 79336459 79336875 -87313421 - L1_Mur1 LINE L1 -3787 2099 1682 4 1190 14801 83 10 6 chrX 79336864 79339620 -87310676 - L1Md_F2 LINE L1 -1 6581 3814 4 1190 1379 252 80 31 chrX 79339617 79340166 -87310130 + Lx9 LINE L1 7068 7643 -1 4 1190 21 0 0 0 chrX 79340170 79340191 -87310105 + AT_rich Low_complexity Low_complexity 1 21 0 4 1190 507 220 277 0 chrX 79340194 79340371 -87309925 - URR1A DNA MER1_type 0 226 1 4 1190 213 0 53 26 chrX 79340466 79340504 -87309792 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1190 285 281 2 33 chrX 79340507 79340640 -87309656 + L1MC2 LINE L1 5679 5810 -534 4 1190 319 311 133 35 chrX 79340788 79340991 -87309305 + L1MC2 LINE L1 6014 6236 -108 4 1190 22 56 0 0 chrX 79341051 79341087 -87309209 + AT_rich Low_complexity Low_complexity 1 36 0 4 1190 257 386 31 8 chrX 79341143 79341271 -87309025 - B1F2 SINE Alu 0 149 19 4 1190 213 368 92 31 chrX 79341222 79341320 -87308976 - B4A SINE B4 -140 152 49 4 1190 205 304 43 14 chrX 79341712 79341782 -87308514 - L2c LINE L2 -44 3343 3272 4 1190 1118 78 0 0 chrX 79342270 79342412 -87307884 + B1_Mus1 SINE Alu 1 142 -6 4 1190 183 26 24 71 chrX 79342414 79342456 -87307840 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 4 1190 21 0 0 0 chrX 79342461 79342482 -87307814 + AT_rich Low_complexity Low_complexity 1 21 0 4 1190 23 33 0 0 chrX 79342496 79342526 -87307770 + AT_rich Low_complexity Low_complexity 1 30 0 4 1190 24 0 0 0 chrX 79343333 79343357 -87306939 + AT_rich Low_complexity Low_complexity 1 24 0 4 1190 2980 87 10 0 chrX 79343692 79344106 -87306190 + BGLII LTR ERVK 2 419 -2 4 1190 499 83 0 82 chrX 79344513 79344604 -87305692 + RMER3D-int LTR ERVK 489 564 -2278 4 1190 735 234 38 45 chrX 79344621 79344992 -87305304 + RMER3D-int LTR ERVK 368 851 -1991 4 1190 323 314 139 28 chrX 79345039 79345183 -87305113 + HAL1-3A_ME LINE L1 2285 2444 -414 4 1190 338 329 12 65 chrX 79345225 79345394 -87304902 + HAL1-3A_ME LINE L1 2285 2444 -414 4 1190 469 115 64 41 chrX 79345394 79345566 -87304730 + GA-rich Low_complexity Low_complexity 5 180 0 4 1190 2629 180 90 72 chrX 79345611 79346281 -87304015 + RMER3D-int LTR ERVK 1014 1695 -1147 4 1190 3119 210 42 41 chrX 79346280 79347197 -87303099 + RMER3D-int LTR ERVK 1924 2841 -1 4 1190 2797 107 19 0 chrX 79347198 79347611 -87302685 + BGLII LTR ERVK 1 421 0 4 1190 227 278 79 85 chrX 79347955 79348120 -87302176 - L1MC LINE L1 -650 5683 5520 4 1190 279 340 10 21 chrX 79348364 79348460 -87301836 + MLT1A1 LTR MaLR 15 109 -299 4 1190 431 322 146 0 chrX 79348872 79349043 -87301253 + ID_B1 SINE B4 9 204 -20 4 1190 268 360 58 7 chrX 79349590 79349727 -87300569 + LTR16B LTR ERVL 303 446 -17 4 1190 2402 172 26 5 chrX 79350371 79350914 -87299382 + L1_Mur1 LINE L1 1503 1993 -3893 4 1190 565 43 21 31 chrX 79350930 79351026 -87299270 - L1Md_F2 LINE L1 0 6582 6488 4 1190 1533 214 9 3 chrX 79351037 79351384 -87298912 + MusHAL1 LINE L1 1547 1895 -817 4 1190 6953 178 15 2 chrX 79351385 79352701 -87297595 + L1_Mur1 LINE L1 4463 5795 -91 4 1190 685 272 40 34 chrX 79352721 79352978 -87297318 + L1VL1 LINE L1 53 485 -5933 4 1190 1093 223 119 41 chrX 79352996 79353365 -87296931 + L1Md_F LINE L1 459 856 -5663 4 1190 33654 64 3 10 chrX 79353366 79358553 -87291743 + L1Md_F2 LINE L1 440 5585 -298 4 1190 7868 52 4 2 chrX 79358554 79359547 -87290749 + L1Md_F2 LINE L1 5587 6581 -1 4 1190 1889 124 16 90 chrX 79359557 79360108 -87290188 + L1VL4 LINE L1 597 1086 -2473 4 1190 587 106 0 0 chrX 79360101 79360195 -87290101 - MusHAL1 LINE L1 -2665 689 596 4 1190 493 170 20 0 chrX 79360201 79360301 -87289995 - L1Md_F LINE L1 -5681 838 737 4 1190 454 275 0 21 chrX 79360303 79360444 -87289852 - L1VL1 LINE L1 -6147 275 138 4 1190 5560 148 11 9 chrX 79360447 79361360 -87288936 + ORR1A2-int LTR MaLR 1048 1962 -1 4 1190 1567 195 39 3 chrX 79361361 79361669 -87288627 + ORR1A2 LTR MaLR 1 319 -8 4 1190 334 360 0 0 chrX 79361751 79361851 -87288445 + ID_B1 SINE B4 91 190 -34 4 1190 8980 101 9 34 chrX 79362426 79363793 -87286503 - Lx3_Mus LINE L1 -2 7007 5674 4 1190 5195 89 16 7 chrX 79363790 79364524 -87285772 + Lx3_Mus LINE L1 4945 5685 -201 4 1190 22 0 0 0 chrX 79364987 79365009 -87285287 + AT_rich Low_complexity Low_complexity 1 22 0 4 1190 338 346 91 11 chrX 79365159 79365346 -87284950 + MLT1B LTR MaLR 133 334 -56 4 1190 5879 176 31 60 chrX 79365442 79366800 -87283496 + L1_Mur2 LINE L1 3747 5065 -812 4 1190 5031 235 18 11 chrX 79366784 79368013 -87282283 + Lx2B LINE L1 5751 6987 -13 4 1190 20714 198 26 23 chrX 79368027 79372190 -87278106 + L1VL4 LINE L1 554 4736 -1150 4 1190 207 0 0 0 chrX 79372190 79372213 -87278083 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 4 1190 20714 191 26 21 chrX 79372213 79372927 -87277369 + L1VL4 LINE L1 4737 5453 -433 4 1190 987 129 0 0 chrX 79372927 79373066 -87277230 + B1_Mus1 SINE Alu 1 139 -9 4 1190 441 0 0 0 chrX 79373066 79373115 -87277181 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1190 20714 191 26 21 chrX 79373115 79373455 -87276841 + L1VL4 LINE L1 5454 5789 -97 4 1190 4703 196 40 90 chrX 79373464 79374471 -87275825 + L1VL1 LINE L1 16 964 -5458 4 1190 3425 33 0 0 chrX 79374471 79374867 -87275429 + MTA_Mm LTR MaLR 1 396 0 4 1190 6687 126 20 8 chrX 79374867 79376039 -87274257 + L1VL1 LINE L1 965 2153 -1545 4 1190 8244 43 35 4 chrX 79376039 79377734 -87272562 - L1Md_F3 LINE L1 0 6584 4838 4 1190 19365 151 17 30 chrX 79377735 79380356 -87269940 + L1_Mus3 LINE L1 2361 4934 -949 4 1190 1025 118 0 0 chrX 79380356 79380500 -87269796 - B1_Mus1 SINE Alu -3 145 2 4 1190 19365 119 54 16 chrX 79380500 79382129 -87268167 + L1_Mus3 LINE L1 4935 6634 -4 4 1190 2009 205 12 5 chrX 79382120 79382532 -87267764 + Lx2 LINE L1 5782 6196 -801 4 1190 279 0 0 0 chrX 79382537 79382568 -87267728 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1190 26 50 0 0 chrX 79383336 79383376 -87266920 + AT_rich Low_complexity Low_complexity 1 40 0 4 1190 24 0 0 0 chrX 79383760 79383784 -87266512 + AT_rich Low_complexity Low_complexity 1 24 0 4 1190 242 275 12 0 chrX 79384040 79384120 -87266176 + L1MA6 LINE L1 6110 6190 -110 4 1190 261 0 0 0 chrX 79384265 79384294 -87266002 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 1190 974 99 13 0 chrX 79385177 79385329 -87264967 + (TTTC)n Simple_repeat Simple_repeat 3 156 0 4 1190 32 57 0 0 chrX 79386161 79386214 -87264082 + AT_rich Low_complexity Low_complexity 1 53 0 4 1190 489 311 17 0 chrX 79386541 79386660 -87263636 + B3A SINE B2 17 137 -61 4 1190 5044 177 9 10 chrX 79387180 79387757 -87262539 + L1_Mur2 LINE L1 427 1008 -6078 4 1190 3217 192 91 111 chrX 79387757 79388677 -87261619 - RMER19B LTR ERVK 0 902 1 4 1190 4352 152 14 22 chrX 79388677 79389133 -87261163 + L1_Mur2 LINE L1 1009 1462 -4415 4 1190 1672 213 94 47 chrX 79389133 79389651 -87260645 - RLTR25B LTR ERVK -66 962 446 4 1190 3570 73 21 0 chrX 79389651 79390116 -87260180 + MT2C_Mm LTR ERVL 1 475 0 4 1190 7962 65 35 2 chrX 79390120 79391181 -87259115 + MTA_Mm-int LTR MaLR 3 1098 0 4 1190 3200 33 2 18 chrX 79391181 79391522 -87258774 + MTA_Mm LTR MaLR 1 342 -54 4 1190 2487 110 111 14 chrX 79391522 79391955 -87258341 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1190 3200 33 2 18 chrX 79391955 79392013 -87258283 + MTA_Mm LTR MaLR 343 394 -2 4 1190 2255 178 32 23 chrX 79392016 79392458 -87257838 - RLTR25B LTR ERVK -582 446 1 4 1190 2455 216 32 28 chrX 79392458 79393138 -87257158 + L1_Mur2 LINE L1 1855 2537 -3340 4 1190 633 79 11 0 chrX 79393348 79393437 -87256859 - B1_Mus2 SINE Alu 0 147 58 4 1190 23 0 0 0 chrX 79393949 79393972 -87256324 + AT_rich Low_complexity Low_complexity 1 23 0 4 1190 7104 76 3 8 chrX 79394044 79394981 -87255315 + L1_Mus1 LINE L1 5635 6567 0 4 1190 485 280 101 13 chrX 79395811 79395970 -87254326 + Lx8 LINE L1 7047 7219 -254 4 1190 576 305 56 48 chrX 79396157 79396196 -87254100 - L1M2 LINE L1 -481 5819 5782 4 1190 459 82 0 0 chrX 79396196 79396269 -87254027 + (TG)n Simple_repeat Simple_repeat 2 74 0 4 1190 576 305 56 48 chrX 79396269 79396566 -87253730 - L1M2 LINE L1 -519 5781 5481 4 1190 316 259 184 39 chrX 79396548 79396853 -87253443 - L1M4b LINE L1 -5216 2118 1770 4 1190 1046 176 38 24 chrX 79398042 79398252 -87252044 - Lx2 LINE L1 -425 6572 6360 4 1190 462 101 0 0 chrX 79398395 79398464 -87251832 + (TAAA)n Simple_repeat Simple_repeat 2 70 0 4 1190 532 270 37 6 chrX 79398464 79398628 -87251668 + MERVL_2A-int LTR ERVL 574 742 -5019 4 1190 463 250 40 16 chrX 79398676 79398802 -87251494 + MERVL_2A-int LTR ERVL 903 1031 -4730 4 1190 863 253 50 32 chrX 79398810 79399068 -87251228 + ORR1D-int LTR MaLR 79 348 -1232 4 1190 305 114 0 0 chrX 79399070 79399114 -87251182 + Lx2A LINE L1 6669 6712 -296 4 1190 882 136 13 0 chrX 79399116 79399270 -87251026 + Lx2A LINE L1 6848 7003 -5 4 1190 17883 61 1 14 chrX 79399336 79402233 -87248063 - L1Md_F2 LINE L1 0 6582 3729 4 1190 3543 15 0 0 chrX 79402233 79402637 -87247659 - L1Md_A LINE L1 0 6582 6179 4 1190 17883 58 1 9 chrX 79402637 79402797 -87247499 - L1Md_F2 LINE L1 -2155 3728 3569 4 1190 503 197 17 17 chrX 79402797 79402916 -87247380 + ORR1D-int LTR MaLR 351 469 -901 4 1190 5397 93 4 4 chrX 79403170 79403938 -87246358 - L1_Mus2 LINE L1 0 6566 5799 4 1190 2201 23 4 0 chrX 79405046 79405306 -87244990 - RLTR10-int LTR ERVK -1686 301 41 4 1190 3047 26 0 120 chrX 79405316 79405759 -87244537 - RLTR10 LTR ERVK 0 390 1 4 1190 8343 17 0 0 chrX 79405761 79406697 -87243599 - RLTR10-int LTR ERVK -3 1984 1049 4 1190 2878 18 3 0 chrX 79406695 79407029 -87243267 - RLTR10-int LTR ERVK -1612 375 41 4 1190 2929 27 0 0 chrX 79407039 79407376 -87242920 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1190 573 361 11 0 chrX 79407464 79407644 -87242652 - B3A SINE B2 -15 183 2 4 1190 27 0 0 0 chrX 79407839 79407866 -87242430 + AT_rich Low_complexity Low_complexity 1 27 0 4 1190 5448 91 11 29 chrX 79407938 79408774 -87241522 + RLTR22_Mus LTR ERVK 11 831 -977 4 1190 1123 155 62 173 chrX 79408933 79409292 -87241004 + RLTR22_Mus LTR ERVK 1525 1848 0 4 1190 346 284 0 0 chrX 79409577 79409679 -87240617 - L1MA5A LINE L1 -365 5932 5831 4 1190 1149 244 123 20 chrX 79409728 79410021 -87240275 - MTD LTR MaLR -84 335 13 4 1190 21 71 0 0 chrX 79410028 79410070 -87240226 + AT_rich Low_complexity Low_complexity 1 42 0 4 1190 420 289 8 23 chrX 79410524 79410655 -87239641 + B1F2 SINE Alu 5 133 -16 4 1190 675 37 0 0 chrX 79410673 79410755 -87239541 + (GAAA)n Simple_repeat Simple_repeat 1 82 0 4 1190 312 339 98 29 chrX 79410757 79410930 -87239366 + HAL1-3A_ME LINE L1 2284 2468 -390 5 1190 259 316 67 40 chrX 79410978 79411202 -87239094 - L1MA5A LINE L1 -743 5548 5319 4 1190 1444 290 70 31 chrX 79411290 79412059 -87238237 - L1_Rod LINE L1 -3826 2021 1223 5 1190 497 284 61 5 chrX 79412042 79412240 -87238056 - L1_Rod LINE L1 -6499 1109 901 5 1190 263 204 0 0 chrX 79412695 79412749 -87237547 + 4.5SRNA scRNA scRNA 1 54 -40 5 1190 912 275 64 17 chrX 79412734 79413019 -87237277 - MTD LTR MaLR -134 285 12 5 1190 725 312 34 24 chrX 79413147 79413439 -87236857 - Lx9 LINE L1 -759 6885 6591 5 1190 345 275 161 78 chrX 79413452 79413645 -87236651 - RLTR24 LTR ERV1 0 529 321 5 1190 261 320 0 0 chrX 79413810 79413885 -87236411 - RLTR24 LTR ERV1 -454 75 1 5 1190 314 225 0 0 chrX 79413942 79414022 -87236274 + (CA)n Simple_repeat Simple_repeat 2 81 0 5 1190 192 40 0 0 chrX 79414047 79414072 -87236224 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1190 527 246 47 23 chrX 79414476 79414605 -87235691 + MT2B LTR ERVL 1 132 -401 5 1190 570 288 37 93 chrX 79414597 79414865 -87235431 + MT2B LTR ERVL 253 505 -96 5 1190 625 345 47 19 chrX 79414891 79415148 -87235148 - MTEa LTR MaLR -113 266 3 5 1190 633 310 37 5 chrX 79415306 79415494 -87234802 + B3 SINE B2 1 194 -22 5 1190 2092 206 53 15 chrX 79415495 79415907 -87234389 - L1_Mur3 LINE L1 -4102 1778 1343 5 1190 5759 142 22 11 chrX 79415907 79416854 -87233442 + RMER17B LTR ERVK 1 958 0 5 1190 2092 239 72 15 chrX 79416854 79417311 -87232985 - L1_Mur3 LINE L1 -4538 1342 860 5 1190 1967 123 48 106 chrX 79417647 79418064 -87232232 - RLTR9C LTR ERVK 0 393 1 5 1190 374 234 118 40 chrX 79418255 79418423 -87231873 + RLTR47_MM LTR ERV1 306 447 -85 5 1190 243 0 0 0 chrX 79418913 79418940 -87231356 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1190 274 276 0 13 chrX 79419085 79419162 -87231134 + MuRRS4-int LTR ERV1 826 901 -6877 5 1190 1578 309 39 30 chrX 79419537 79420298 -87229998 + MuRRS4-int LTR ERV1 1049 2011 -5545 5 1190 528 16 0 0 chrX 79420298 79420359 -87229937 + (GA)n Simple_repeat Simple_repeat 2 62 0 5 1190 1187 319 87 62 chrX 79420359 79420610 -87229686 + MuRRS4-int LTR ERV1 2012 2231 -5325 5 1190 3433 220 54 40 chrX 79420653 79421902 -87228394 - MMVL30-int LTR ERV1 -3091 4361 2874 5 1190 3508 155 31 68 chrX 79422031 79422772 -87227524 - MMVL30-int LTR ERV1 -1489 2209 1496 5 1190 213 339 0 0 chrX 79422792 79422851 -87227445 - B1F2 SINE Alu -90 59 1 5 1190 418 188 30 31 chrX 79423036 79423234 -87227062 - MMVL30-int LTR ERV1 -2115 1184 1020 5 1190 496 143 22 93 chrX 79423204 79423343 -87226953 - MMVL30-int LTR ERV1 -2222 1077 949 5 1190 542 178 30 0 chrX 79423423 79423524 -87226772 - MMVL30-int LTR ERV1 -2246 1452 1349 5 1190 297 68 0 0 chrX 79423585 79423629 -87226667 + (T)n Simple_repeat Simple_repeat 1 44 0 5 1190 308 282 28 26 chrX 79423630 79423745 -87226551 - MMVL30-int LTR ERV1 -3812 1251 1157 5 1190 587 212 4 160 chrX 79423915 79424140 -87226156 - MMVL30-int LTR ERV1 -2349 1349 1160 5 1190 1554 186 47 36 chrX 79424215 79424577 -87225719 - MMVL30-int LTR ERV1 -2561 1137 772 5 1190 314 75 0 36 chrX 79425011 79425066 -87225230 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 5 1190 232 315 71 36 chrX 79425153 79425265 -87225031 - LTRIS4 LTR ERV1 -50 457 342 5 1190 821 316 20 14 chrX 79425882 79426313 -87223983 + MuRRS4-int LTR ERV1 3465 3919 -3687 5 1190 3060 119 6 39 chrX 79426369 79426860 -87223436 + MT2C_Mm LTR ERVL 1 475 0 5 1190 1026 158 11 22 chrX 79427771 79427952 -87222344 + B2_Mm1t SINE B2 1 179 -14 5 1190 315 161 0 35 chrX 79427969 79428027 -87222269 + B2_Mm2 SINE B2 47 102 -93 5 1190 348 24 0 0 chrX 79428046 79428087 -87222209 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 5 148 21996 129 29 16 chrX 79428329 79429682 -87220614 + L1_Mus1 LINE L1 2147 3489 -2394 5 1191 207 0 0 0 chrX 79429682 79429705 -87220591 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1191 21996 117 26 12 chrX 79429705 79432708 -87217588 + L1_Mus1 LINE L1 3490 6566 -1 5 1191 624 136 19 0 chrX 79433016 79433119 -87217177 + U6 snRNA snRNA 2 106 -1 5 1191 7609 152 12 10 chrX 79433121 79434565 -87215731 + MusHAL1 LINE L1 13 1459 -1253 5 1191 5269 80 6 10 chrX 79434602 79435324 -87214972 - L1Md_F2 LINE L1 -12 6570 5852 5 1191 1230 111 0 10 chrX 79435310 79435502 -87214794 - L1Md_F2 LINE L1 -12 6570 6381 5 1191 2029 21 0 0 chrX 79435509 79435742 -87214554 - L1Md_F2 LINE L1 -717 5867 5635 5 1191 1929 56 0 0 chrX 79435740 79435973 -87214323 + L1Md_F2 LINE L1 5414 5646 -237 5 1191 3769 138 41 7 chrX 79435968 79436374 -87213922 + MusHAL1 LINE L1 1442 1864 -848 5 1191 260 70 0 23 chrX 79436374 79436418 -87213878 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 5 1191 3769 138 41 7 chrX 79436418 79436699 -87213597 + MusHAL1 LINE L1 1865 2151 -561 5 1191 6988 174 59 9 chrX 79436671 79438227 -87212069 + Lx2 LINE L1 5365 6997 0 5 1191 636 289 46 0 chrX 79438841 79439014 -87211282 + B3A SINE B2 2 182 -16 5 1191 22 56 0 0 chrX 79439030 79439066 -87211230 + AT_rich Low_complexity Low_complexity 1 36 0 5 1191 619 373 111 4 chrX 79439143 79439500 -87210796 + MTE-int LTR MaLR 804 1213 -367 5 1191 1138 89 0 0 chrX 79439520 79439666 -87210630 + B1_Mus1 SINE Alu 1 146 -2 5 1191 252 77 0 0 chrX 79439666 79439705 -87210591 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1191 26 0 0 0 chrX 79439745 79439771 -87210525 + AT_rich Low_complexity Low_complexity 1 26 0 5 1191 1081 291 60 22 chrX 79440227 79440592 -87209704 + MTE2a LTR MaLR 1 379 0 5 1191 684 78 0 0 chrX 79440826 79440916 -87209380 + L1Md_F LINE L1 295 384 -6135 5 1191 335 247 115 18 chrX 79441261 79441426 -87208870 + L1MA6 LINE L1 5203 5383 -760 5 1191 1157 298 94 8 chrX 79441520 79442106 -87208190 + L1MA6 LINE L1 5527 6162 -138 5 1191 24 0 0 0 chrX 79442250 79442274 -87208022 + AT_rich Low_complexity Low_complexity 1 24 0 5 1191 485 317 71 19 chrX 79442644 79442911 -87207385 - RMER5 LTR ERV1 -10 524 244 5 1191 22 80 0 0 chrX 79443014 79443064 -87207232 + AT_rich Low_complexity Low_complexity 1 50 0 5 1191 21 0 0 0 chrX 79444467 79444488 -87205808 + AT_rich Low_complexity Low_complexity 1 21 0 5 1191 364 274 8 8 chrX 79444741 79444890 -87205406 - L1MA6 LINE L1 -281 6022 5870 5 1191 1435 50 0 47 chrX 79445532 79445781 -87204515 - L1Md_F3 LINE L1 0 6584 6359 5 1191 596 158 0 9 chrX 79446555 79446670 -87203626 + Lx LINE L1 6541 6654 0 5 1191 1309 231 58 15 chrX 79446684 79447013 -87203283 - RMER12 LTR ERVK -163 1159 817 5 1191 1915 96 31 22 chrX 79447013 79447332 -87202964 - RLTRETN_Mm LTR ERVK 0 322 1 5 1191 17257 148 35 20 chrX 79447332 79454131 -87196165 - ETnERV2-int LTR ERVK -107 7299 1 5 1191 1936 96 31 22 chrX 79454131 79454450 -87195846 - RLTRETN_Mm LTR ERVK 0 322 1 5 1191 3466 212 39 16 chrX 79454450 79454492 -87195804 - RMER12 LTR ERVK -500 822 778 5 1191 642 26 0 0 chrX 79454492 79454568 -87195728 + (TGGA)n Simple_repeat Simple_repeat 1 76 0 5 1191 3466 212 39 16 chrX 79454568 79455329 -87194967 - RMER12 LTR ERVK -545 777 1 5 1191 14443 88 6 0 chrX 79455366 79457508 -87192788 + L1_Mm LINE L1 2050 4204 -1679 5 1191 6409 70 14 2 chrX 79457510 79458358 -87191938 + L1Md_F2 LINE L1 5713 6570 -12 5 1191 25 51 0 0 chrX 79458708 79458747 -87191549 + AT_rich Low_complexity Low_complexity 1 39 0 5 1191 904 34 0 0 chrX 79458748 79458866 -87191430 - L1Md_T LINE L1 -2 6580 6463 5 1191 15634 35 4 13 chrX 79458866 79461679 -87188617 - L1Md_A LINE L1 -2652 3231 452 5 1191 216 135 0 0 chrX 79461736 79461773 -87188523 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 5 1191 286 224 11 23 chrX 79461773 79461860 -87188436 - Lx6 LINE L1 -8 7452 7367 5 1191 1646 212 72 6 chrX 79461945 79462306 -87187990 - Lx4A LINE L1 -25 7033 6649 5 1191 232 257 0 54 chrX 79462350 79462424 -87187872 + L1M3 LINE L1 5818 5887 -284 5 1191 1164 274 69 14 chrX 79462758 79463106 -87187190 - MTD LTR MaLR -52 367 1 5 1191 381 324 7 0 chrX 79463107 79463255 -87187041 - MTD-int LTR MaLR -9 1249 1101 5 1191 1424 311 30 22 chrX 79463275 79464274 -87186022 - Lx6 LINE L1 -26 7434 6157 5 1191 1603 283 91 65 chrX 79464285 79465217 -87185079 - MTD-int LTR MaLR -153 945 2 5 1191 1426 281 35 18 chrX 79465230 79465628 -87184668 - MTD LTR MaLR -14 405 1 5 1191 233 272 0 80 chrX 79466005 79466105 -87184191 + RLTR13D2 LTR ERVK 390 481 -542 5 1191 33835 70 7 8 chrX 79466185 79472376 -87177920 - L1Md_F3 LINE L1 -1 6583 406 5 1191 1020 108 0 0 chrX 79472505 79472671 -87177625 + (GAAA)n Simple_repeat Simple_repeat 3 168 0 5 1191 534 229 20 7 chrX 79473133 79473298 -87176998 + L1_Mur3 LINE L1 2185 2360 -3520 5 1191 3369 51 11 0 chrX 79473289 79473724 -87176572 + L1_Mm LINE L1 5355 5794 -89 5 1191 2898 182 46 11 chrX 79473706 79474427 -87175869 + L1_Mur3 LINE L1 2833 3578 -2302 5 1191 318 269 12 71 chrX 79474491 79474575 -87175721 - PB1D10 SINE Alu -38 79 1 5 1191 4914 144 13 6 chrX 79475465 79476260 -87174036 + Lx3A LINE L1 6179 6978 -3 5 1191 414 0 0 0 chrX 79476297 79476343 -87173953 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1191 218 340 18 91 chrX 79476555 79476665 -87173631 - PB1D10 SINE Alu -12 105 4 5 1191 588 124 8 34 chrX 79476768 79476885 -87173411 - Lx LINE L1 -6 6648 6535 5 1191 5692 107 32 1 chrX 79476886 79477735 -87172561 + L1_Mus3 LINE L1 5755 6629 -9 5 1191 306 0 0 0 chrX 79477735 79477769 -87172527 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 5 1191 36028 48 5 5 chrX 79477831 79484459 -87165837 - L1Md_T LINE L1 -1 6584 2 5 1191 333 60 0 0 chrX 79484560 79484610 -87165686 - L1_Mm LINE L1 -3528 2355 2306 5 1191 3030 120 16 24 chrX 79484602 79485171 -87165125 + MusHAL1 LINE L1 266 832 -1880 5 1191 3117 84 7 9 chrX 79485171 79485605 -87164691 - L1_Mus1 LINE L1 -1 6566 6134 5 1191 5474 122 1 0 chrX 79485605 79486452 -87163844 + L1_Mus4 LINE L1 5617 6464 -172 5 1191 368 271 162 19 chrX 79486447 79486487 -87163809 - Lx9 LINE L1 -421 7223 7162 5 1191 219 88 0 0 chrX 79486487 79486521 -87163775 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1191 368 271 162 19 chrX 79486521 79486634 -87163662 - Lx9 LINE L1 -483 7161 7049 5 1191 294 29 0 0 chrX 79487221 79487256 -87163040 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1191 483 357 32 37 chrX 79487291 79487480 -87162816 - B4 SINE B4 -2 290 103 5 1191 235 0 0 54 chrX 79487525 79487562 -87162734 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 5 1191 22 0 0 0 chrX 79488041 79488063 -87162233 + AT_rich Low_complexity Low_complexity 1 22 0 5 1191 528 202 9 19 chrX 79488202 79488308 -87161988 - B1_Mm SINE Alu -20 127 23 5 1191 29 47 0 0 chrX 79488320 79488363 -87161933 + AT_rich Low_complexity Low_complexity 1 43 0 5 1191 3162 14 0 42 chrX 79488437 79488820 -87161476 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1191 4593 53 46 14 chrX 79488820 79489455 -87160841 + IAPEz-int LTR ERVK 8 662 -5819 5 1191 424 38 0 0 chrX 79489455 79489508 -87160788 + IAPEz-int LTR ERVK 1359 1411 -5070 5 1191 1726 119 4 4 chrX 79489507 79489769 -87160527 + IAPEz-int LTR ERVK 2236 2497 -5183 5 1191 886 73 24 0 chrX 79489766 79489889 -87160407 + IAPEz-int LTR ERVK 4785 4910 -2770 5 1191 25139 15 2 0 chrX 79489889 79492839 -87157457 + IAPEz-int LTR ERVK 3525 6481 0 5 1191 3162 14 0 42 chrX 79492839 79493222 -87157074 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1191 198 0 0 0 chrX 79494153 79494175 -87156121 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 5 1191 695 69 0 36 chrX 79494195 79494345 -87155951 - L1Md_F2 LINE L1 -2 6582 6443 5 1191 964 50 0 0 chrX 79494341 79494460 -87155836 + L1_Mus1 LINE L1 6311 6429 -138 5 1191 4373 156 46 60 chrX 79494557 79495200 -87155096 + RLTR13D6 LTR ERVK 1 656 -246 5 1191 5558 24 0 0 chrX 79495200 79495838 -87154458 - L1Md_A LINE L1 -1 6581 5944 5 1191 4373 156 46 60 chrX 79495838 79496100 -87154196 + RLTR13D6 LTR ERVK 657 894 -8 5 1191 461 227 71 34 chrX 79496965 79497163 -87153133 + Lx4B LINE L1 6727 7025 -33 5 1191 183 80 0 0 chrX 79497175 79497200 -87153096 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 5 1191 434 291 19 62 chrX 79497837 79497972 -87152324 + RSINE1 SINE B4 12 147 -18 6 1191 423 0 0 0 chrX 79497972 79498019 -87152277 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1191 369 0 0 0 chrX 79498019 79498059 -87152237 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 1191 434 291 19 62 chrX 79498059 79498083 -87152213 + RSINE1 SINE B4 148 164 -1 6 1191 3114 203 77 35 chrX 79498553 79498942 -87151354 + L1_Mur3 LINE L1 3195 3577 -2303 6 1191 1481 32 26 11 chrX 79498942 79499101 -87151195 + B2_Mm1a SINE B2 2 160 -33 6 1191 186 43 0 0 chrX 79499101 79499124 -87151172 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 6 1191 1481 32 26 11 chrX 79499124 79499153 -87151143 + B2_Mm1a SINE B2 161 193 0 6 1191 3114 203 77 35 chrX 79499153 79499419 -87150877 + L1_Mur3 LINE L1 3578 3846 -2034 6 1191 687 25 0 0 chrX 79499419 79499500 -87150796 + (GAA)n Simple_repeat Simple_repeat 1 81 0 6 1191 3114 203 77 35 chrX 79499500 79499771 -87150525 + L1_Mur3 LINE L1 3847 4160 -1720 6 1191 492 239 27 37 chrX 79499773 79499960 -87150336 + RMER17C LTR ERVK 91 275 -135 6 1191 297 0 0 0 chrX 79499967 79500000 -87150296 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 6 1191 387 105 0 0 chrX 79500009 79500066 -87150230 + (GAAA)n Simple_repeat Simple_repeat 4 60 0 1 1191 2413 216 30 34 chrX 79500066 79500721 -87149575 + L1_Mur3 LINE L1 4147 4799 -1081 2 1191 3875 152 94 7 chrX 79500866 79501544 -87148752 - RMER19A LTR ERVK 0 737 1 3 1191 269 140 18 0 chrX 79501692 79501749 -87148547 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 1191 789 204 0 0 chrX 79502371 79502508 -87147788 + B1_Mur4 SINE Alu 8 144 -6 5 1191 213 39 0 0 chrX 79502513 79502539 -87147757 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 1191 1753 257 136 34 chrX 79502809 79503454 -87146842 + RMER1C Other Other 622 1332 -10 7 1191 24 32 0 0 chrX 79503536 79503567 -87146729 + AT_rich Low_complexity Low_complexity 1 31 0 8 1191 1611 128 0 96 chrX 79503835 79504128 -87146168 - ORR1A2 LTR MaLR -62 265 1 9 1191 710 213 35 29 chrX 79505358 79505532 -87144764 - ORR1D1 LTR MaLR 0 374 200 1 1191 405 0 0 0 chrX 79505549 79505594 -87144702 + (GA)n Simple_repeat Simple_repeat 1 45 0 1 1191 310 286 0 32 chrX 79505594 79505688 -87144608 - ORR1D1 LTR MaLR -283 91 1 1 1191 1016 289 38 32 chrX 79505958 79506273 -87144023 + Lx8 LINE L1 6213 6529 -944 1 1191 369 0 0 0 chrX 79506357 79506398 -87143898 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1191 480 324 31 18 chrX 79506429 79506655 -87143641 + Lx8 LINE L1 6930 7158 -315 1 1191 285 343 0 9 chrX 79506934 79507043 -87143253 + Lx8 LINE L1 7017 7124 -349 1 1191 299 227 0 18 chrX 79507065 79507137 -87143159 - B4 SINE B4 -213 79 9 1 1191 40882 6 0 0 chrX 79508071 79514647 -87135649 - L1Md_A LINE L1 0 6582 7 1 1191 236 371 82 18 chrX 79515550 79515720 -87134576 + RMER15 LTR ERVL 372 552 -23 1 1191 643 332 79 72 chrX 79515970 79516340 -87133956 + MTE2a LTR MaLR 23 405 -14 1 1191 1327 253 75 67 chrX 79516346 79516762 -87133534 + RMER15 LTR ERVL 1 419 -156 1 1191 755 331 50 6 chrX 79517002 79517339 -87132957 + RMER15-int LTR ERVL 531 882 -4117 1 1191 22 0 0 0 chrX 79517374 79517396 -87132900 + AT_rich Low_complexity Low_complexity 1 22 0 2 1191 457 202 111 0 chrX 79517411 79517510 -87132786 - B1_Mur4 SINE Alu 0 150 41 2 1191 222 278 0 0 chrX 79517512 79517620 -87132676 + CT-rich Low_complexity Low_complexity 3 110 0 2 1191 742 165 25 0 chrX 79517610 79517768 -87132528 + (TCTCTG)n Simple_repeat Simple_repeat 1 162 0 2 1191 7232 185 54 7 chrX 79517817 79519401 -87130895 + Lx4B LINE L1 5389 7052 -6 2 1191 883 318 72 89 chrX 79519583 79519663 -87130633 + RMER15-int LTR ERVL 4217 4297 -702 1 1191 570 29 0 0 chrX 79519663 79519731 -87130565 + (TAG)n Simple_repeat Simple_repeat 2 69 0 2 1191 883 318 72 89 chrX 79519731 79520399 -87129897 + RMER15-int LTR ERVL 4298 4951 -48 1 1191 428 332 65 23 chrX 79520589 79520805 -87129491 + RMER15 LTR ERVL 336 560 -15 1 1191 213 121 0 0 chrX 79521050 79521083 -87129213 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 2 1191 265 306 40 101 chrX 79521160 79521309 -87128987 - PB1D10 SINE Alu 0 149 10 2 1191 307 264 18 26 chrX 79521848 79521961 -87128335 + GA-rich Low_complexity Low_complexity 2 113 0 2 1191 1847 152 25 3 chrX 79523457 79523774 -87126522 + RMER13B LTR ERVK 183 506 -402 2 1191 342 0 0 0 chrX 79523774 79523812 -87126484 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1191 231 321 74 19 chrX 79524992 79525100 -87125196 + MTE2a LTR MaLR 3 116 -303 3 1191 562 195 43 75 chrX 79526102 79526263 -87124033 - ORR1C2 LTR MaLR -220 164 9 3 1191 691 333 3 63 chrX 79526407 79526452 -87123844 + MTE2a LTR MaLR 112 152 -227 3 1191 1390 202 67 93 chrX 79526452 79526840 -87123456 - ORR1C1 LTR MaLR 0 378 1 3 1191 691 333 3 63 chrX 79526840 79527079 -87123217 + MTE2a LTR MaLR 153 379 0 3 1191 38 39 0 0 chrX 79527381 79527433 -87122863 + AT_rich Low_complexity Low_complexity 1 52 0 3 1191 257 180 131 0 chrX 79527737 79527798 -87122498 + MER5A1 DNA MER1_type 88 156 -10 3 1191 2804 98 5 14 chrX 79527799 79528212 -87122084 + RLTR9E LTR ERVK 1 409 0 3 1191 774 246 134 58 chrX 79528213 79528572 -87121724 + ETnERV-int LTR ERVK 2 387 -2927 3 1191 232 294 11 56 chrX 79528583 79528673 -87121623 - MLT2B3 LTR ERVL -295 259 174 3 1191 680 127 149 26 chrX 79528673 79528827 -87121469 + ETnERV-int LTR ERVK 1159 1331 -6075 3 1191 5103 181 50 48 chrX 79528821 79530367 -87119929 + ETnERV2-int LTR ERVK 886 3362 -4044 3 1191 19922 106 28 25 chrX 79530613 79531073 -87119223 + ETnERV2-int LTR ERVK 3441 3930 -3476 3 1191 207 0 0 0 chrX 79531073 79531096 -87119200 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 1191 19922 106 28 25 chrX 79531096 79531493 -87118803 + ETnERV2-int LTR ERVK 3931 4348 -3058 3 1191 429 20 0 0 chrX 79531493 79531543 -87118753 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 1191 19922 106 28 25 chrX 79531543 79532310 -87117986 + ETnERV2-int LTR ERVK 4349 5135 -2271 3 1191 2981 32 0 0 chrX 79532310 79532656 -87117640 - ORR1A0 LTR MaLR 0 346 1 4 1191 19922 106 28 25 chrX 79532656 79534010 -87116286 + ETnERV2-int LTR ERVK 5136 6428 -978 3 1191 420 135 27 0 chrX 79534220 79534294 -87116002 + ETnERV2-int LTR ERVK 7331 7406 0 3 1191 2702 111 7 10 chrX 79534294 79534704 -87115592 + RLTR9E LTR ERVK 1 409 0 3 1191 445 183 213 101 chrX 79534705 79534893 -87115403 + ETnERV2-int LTR ERVK 2 210 -3104 3 1191 2531 140 38 21 chrX 79535482 79535905 -87114391 + RLTR23 LTR ERV1 1 430 0 4 1191 619 335 58 22 chrX 79536354 79536790 -87113506 + MuRRS4-int LTR ERV1 1159 1752 -5804 4 1191 410 308 63 21 chrX 79536824 79537146 -87113150 + MuRRS4-int LTR ERV1 2937 3258 -4343 4 1191 1549 225 30 22 chrX 79537186 79537591 -87112705 - RMER17C LTR ERVK -2 408 1 4 1191 282 133 0 0 chrX 79537770 79537815 -87112481 - L1_Mur2 LINE L1 -6035 677 633 4 1191 248 254 68 0 chrX 79537844 79537903 -87112393 - MTEb LTR MaLR -316 63 1 4 1191 4247 118 37 37 chrX 79538131 79538465 -87111831 + RMER17A LTR ERVK 1 328 -423 4 1191 351 0 0 0 chrX 79538465 79538504 -87111792 + (TTCTC)n Simple_repeat Simple_repeat 1 39 0 4 1191 1296 84 0 0 chrX 79538505 79538684 -87111612 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 4 1191 4247 118 37 37 chrX 79538684 79539098 -87111198 + RMER17A LTR ERVK 329 751 0 4 1191 1339 255 58 100 chrX 79539361 79539572 -87110724 - RLTR18B LTR ERVK -2 510 287 5 1191 1068 83 7 0 chrX 79539572 79539716 -87110580 + B1_Mm SINE Alu 2 146 -1 5 1191 239 0 0 31 chrX 79539721 79539753 -87110543 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 5 1191 1339 255 58 100 chrX 79539753 79540067 -87110229 - RLTR18B LTR ERVK -226 286 1 5 1191 2397 179 57 17 chrX 79540110 79540634 -87109662 - Lx3C LINE L1 -565 6411 5867 5 1191 2486 136 41 2 chrX 79540663 79541106 -87109190 - L1_Mur2 LINE L1 -895 4982 4523 5 1191 245 206 0 49 chrX 79541136 79541209 -87109087 + L1_Mur2 LINE L1 342 401 -6311 5 1191 396 0 0 0 chrX 79541936 79541980 -87108316 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 5 1191 3592 76 2 11 chrX 79542827 79543305 -87106991 - L1_Mus2 LINE L1 0 6566 6093 5 1191 4493 145 49 0 chrX 79543308 79544066 -87106230 - Lx3B LINE L1 -5 6968 6174 5 1191 2179 164 20 30 chrX 79544074 79544476 -87105820 - RLTR9D LTR ERVK -5 398 1 5 1191 2298 113 12 3 chrX 79544478 79544850 -87105446 - Lx3B LINE L1 -795 6178 5802 5 1191 1666 264 27 5 chrX 79544871 79545278 -87105018 - MTD LTR MaLR 0 419 4 6 1191 257 405 100 16 chrX 79546556 79546925 -87103371 + L2 LINE L2 2624 3023 -396 6 1191 1210 208 128 3 chrX 79547046 79547374 -87102922 - Lx9 LINE L1 -2 7642 7274 6 1191 448 257 0 0 chrX 79547372 79547485 -87102811 - Lx9 LINE L1 -500 7144 7032 6 1191 720 284 186 42 chrX 79547908 79548363 -87101933 - Lx8 LINE L1 -904 6792 6285 6 1191 376 245 75 38 chrX 79548730 79548836 -87101460 + ID_B1 SINE B4 106 215 -9 6 1191 25 0 0 0 chrX 79549176 79549201 -87101095 + AT_rich Low_complexity Low_complexity 1 25 0 6 1191 809 293 56 96 chrX 79549319 79549696 -87100600 + MTE2a LTR MaLR 1 362 -17 6 1191 3049 299 45 31 chrX 79550943 79552153 -87098143 + Lx9 LINE L1 6334 7559 -85 6 1191 283 279 0 0 chrX 79554992 79555053 -87095243 - ID4_ SINE ID -4 79 19 6 1191 304 333 34 82 chrX 79555053 79555200 -87095096 - ID_B1 SINE B4 -3 221 82 6 1191 191 299 15 0 chrX 79555343 79555410 -87094886 + MER5B DNA MER1_type 19 86 -92 7 1191 198 0 0 0 chrX 79557347 79557369 -87092927 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 7 1191 28 29 0 0 chrX 79559290 79559325 -87090971 + AT_rich Low_complexity Low_complexity 1 35 0 7 1191 315 49 0 0 chrX 79560080 79560121 -87090175 + (TA)n Simple_repeat Simple_repeat 2 42 0 7 148 446 301 63 53 chrX 79560637 79560844 -87089452 + MER63A DNA AcHobo 1 209 -1 7 1192 31 58 0 0 chrX 79562572 79562624 -87087672 + AT_rich Low_complexity Low_complexity 1 52 0 7 1192 4629 166 6 31 chrX 79562817 79563694 -87086602 - Lx4B LINE L1 0 7058 6204 7 1192 1180 202 60 69 chrX 79563699 79564010 -87086286 + RMER6C LTR ERVK 78 384 -306 7 1192 285 145 0 0 chrX 79564010 79564072 -87086224 + (CAGTT)n Simple_repeat Simple_repeat 1 62 0 7 1192 1180 202 60 69 chrX 79564072 79564110 -87086186 + RMER6C LTR ERVK 385 424 -266 7 1192 3659 138 25 2 chrX 79564247 79564835 -87085461 - Lx LINE L1 0 6654 6053 7 1192 4465 157 25 4 chrX 79564835 79565635 -87084661 - L1_Mur2 LINE L1 -716 5161 4345 8 1192 2473 68 0 0 chrX 79565797 79566119 -87084177 - L1Md_F2 LINE L1 -7 6575 6254 8 1192 708 330 11 22 chrX 79566278 79566634 -87083662 - MuRRS4-int LTR ERV1 -180 4883 4532 8 1192 1323 69 0 0 chrX 79566644 79566819 -87083477 + (TTTC)n Simple_repeat Simple_repeat 3 177 0 8 1192 7193 67 8 0 chrX 79566869 79567785 -87082511 - L1_Mus1 LINE L1 0 6567 5645 8 1192 2334 92 58 0 chrX 79567783 79568111 -87082185 + L1_Mus1 LINE L1 5318 5664 -219 8 1192 849 184 61 5 chrX 79568203 79568400 -87081896 - RMER16-int LTR ERVK -1706 3700 3493 8 1192 10043 123 31 45 chrX 79568374 79568854 -87081442 - RMER16-int LTR ERVK -2113 3293 2819 8 1192 1280 97 38 0 chrX 79568854 79569040 -87081256 + B2_Mm2 SINE B2 1 193 -2 8 1192 10043 123 31 45 chrX 79569040 79570311 -87079985 - RMER16-int LTR ERVK -2588 2818 1566 8 1192 354 282 52 52 chrX 79570368 79570559 -87079737 - SRV_MM-int LTR ERVK -3812 2355 2165 8 1192 643 283 8 13 chrX 79570615 79570882 -87079414 - ETnERV2-int LTR ERVK -5075 2331 2195 8 1192 7012 127 100 16 chrX 79570996 79572221 -87078075 - RMER16-int LTR ERVK -3829 1577 249 8 1192 303 93 0 0 chrX 79572554 79572597 -87077699 + (T)n Simple_repeat Simple_repeat 1 43 0 9 1192 548 267 121 60 chrX 79572668 79573015 -87077281 - RLTR9A LTR ERVK 0 368 1 9 1192 21 36 0 0 chrX 79573516 79573544 -87076752 + AT_rich Low_complexity Low_complexity 1 28 0 9 1192 39 22 0 0 chrX 79574285 79574331 -87075965 + AT_rich Low_complexity Low_complexity 1 46 0 9 1192 1774 193 28 3 chrX 79574476 79574834 -87075462 - ORR1B2 LTR MaLR 0 367 1 9 1192 26 30 0 0 chrX 79574971 79575004 -87075292 + AT_rich Low_complexity Low_complexity 1 33 0 9 1192 14693 174 19 54 chrX 79575053 79577824 -87072472 + L1_Mus3 LINE L1 1423 4003 -1877 9 1192 887 114 0 0 chrX 79577824 79577955 -87072341 + B1_Mus1 SINE Alu 18 148 0 9 1192 14693 174 19 54 chrX 79577955 79578945 -87071351 + L1_Mus3 LINE L1 4004 4927 -953 9 1192 1109 75 7 0 chrX 79578945 79579091 -87071205 - B1_Mus1 SINE Alu 0 148 2 9 1192 13814 233 17 107 chrX 79579091 79579641 -87070655 + L1_Mus3 LINE L1 4928 5455 -425 9 1192 1178 55 0 7 chrX 79579641 79579789 -87070507 + B1_Mm SINE Alu 1 147 0 9 1192 13814 118 5 21 chrX 79579789 79580993 -87069303 + L1_Mus3 LINE L1 5456 6632 -6 9 1192 375 347 64 55 chrX 79581262 79581683 -87068613 - MER99 DNA hAT? -4 827 403 1 1192 991 144 0 11 chrX 79581932 79582115 -87068181 - L1Md_F2 LINE L1 0 6582 6402 1 1192 31805 82 6 10 chrX 79582115 79586715 -87063581 - L1Md_F2 LINE L1 -200 5683 1101 1 1192 6851 189 16 10 chrX 79586714 79588281 -87062015 - Lx5 LINE L1 -107 6943 5358 1 1192 225 306 0 0 chrX 79588393 79588442 -87061854 + B1F2 SINE Alu 1 49 -100 1 1192 1111 79 0 0 chrX 79588445 79588584 -87061712 + B1_Mus1 SINE Alu 1 139 -9 1 1192 429 54 0 0 chrX 79588591 79588647 -87061649 + (TAA)n Simple_repeat Simple_repeat 2 57 0 1 1192 1612 306 91 26 chrX 79588745 79589390 -87060906 + Lx9 LINE L1 6735 7420 -224 1 1192 486 0 0 0 chrX 79589390 79589444 -87060852 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 1192 1612 306 91 26 chrX 79589444 79589502 -87060794 + Lx9 LINE L1 7421 7483 -161 1 1192 180 0 0 0 chrX 79590049 79590069 -87060227 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 1 1192 25 65 0 0 chrX 79590296 79590342 -87059954 + AT_rich Low_complexity Low_complexity 1 46 0 1 1192 1392 194 102 23 chrX 79591446 79591837 -87058459 - L1_Rod LINE L1 -160 5687 5266 1 1192 18617 125 7 32 chrX 79592059 79596051 -87054245 - L1VL1 LINE L1 -1582 4301 411 1 1192 423 68 0 0 chrX 79596499 79596558 -87053738 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 1192 1187 339 56 7 chrX 79596663 79597111 -87053185 - Lx7 LINE L1 -365 7331 6862 1 1192 8518 140 21 1 chrX 79597170 79598703 -87051593 - Lx2 LINE L1 -19 6978 5411 1 1192 1892 281 77 35 chrX 79598708 79599453 -87050843 - Lx7 LINE L1 -856 6840 6065 1 1192 28 29 0 0 chrX 79599576 79599611 -87050685 + AT_rich Low_complexity Low_complexity 1 35 0 1 1192 270 0 0 0 chrX 79599630 79599660 -87050636 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1 1192 458 354 0 78 chrX 79600479 79600709 -87049587 + B3A SINE B2 5 216 0 1 1192 448 198 20 60 chrX 79601280 79601399 -87048897 + B1_Mur2 SINE Alu 1 149 0 1 1192 225 0 0 0 chrX 79601410 79601435 -87048861 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 1 1192 562 323 83 41 chrX 79602265 79602543 -87047753 + L1MA5A LINE L1 5375 5641 -656 1 1192 387 0 0 0 chrX 79602543 79602586 -87047710 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1192 562 323 83 41 chrX 79602586 79602800 -87047496 + L1MA5A LINE L1 5642 5888 -409 1 1192 351 0 0 0 chrX 79603177 79603216 -87047080 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 1192 243 0 0 0 chrX 79603216 79603242 -87047054 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 1192 643 306 43 25 chrX 79603801 79604079 -87046217 - B4A SINE B4 -7 285 3 1 1192 243 0 0 0 chrX 79604097 79604124 -87046172 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 1192 270 243 109 23 chrX 79604690 79604785 -87045511 - MLT2B4 LTR ERVL -35 524 424 1 1192 470 97 28 0 chrX 79604832 79604904 -87045392 - Lx3B LINE L1 -647 6326 6253 1 1192 2704 146 9 13 chrX 79604904 79605354 -87044942 + Lx3B LINE L1 6514 6961 -12 1 1192 28 0 0 0 chrX 79605361 79605389 -87044907 + AT_rich Low_complexity Low_complexity 1 28 0 1 1192 432 0 0 0 chrX 79605777 79605825 -87044471 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1192 458 246 51 29 chrX 79605825 79605953 -87044343 - MLT2B4 LTR ERVL -405 151 20 1 1192 2888 107 2 2 chrX 79606188 79606609 -87043687 - BGLII LTR ERVK 0 421 1 1 1192 2987 221 57 42 chrX 79606610 79607547 -87042749 - RMER3D-int LTR ERVK -1 2841 1891 1 1192 647 188 33 53 chrX 79607515 79607667 -87042629 - RMER3D-int LTR ERVK -1148 1694 1546 1 1192 1857 195 107 17 chrX 79607710 79608186 -87042110 - RMER3D-int LTR ERVK -1309 1533 1015 1 1192 2968 82 12 2 chrX 79608595 79609012 -87041284 - BGLII LTR ERVK 0 421 1 1 1192 589 387 18 53 chrX 79609111 79609392 -87040904 - B4A SINE B4 -18 274 4 1 1192 25 51 0 0 chrX 79609805 79609844 -87040452 + AT_rich Low_complexity Low_complexity 1 39 0 1 1192 682 246 14 7 chrX 79609956 79610099 -87040197 + B1_Mur4 SINE Alu 6 149 -1 1 1192 24 53 0 0 chrX 79610146 79610184 -87040112 + AT_rich Low_complexity Low_complexity 1 38 0 1 1192 183 256 23 0 chrX 79610468 79610511 -87039785 + MIRc SINE MIR 109 152 -116 1 1192 3718 105 2 2 chrX 79610577 79611122 -87039174 - L1_Mus2 LINE L1 -638 5245 4701 1 1192 4241 84 5 1 chrX 79611117 79611987 -87038309 + L1_Mus2 LINE L1 5255 6127 -439 1 1192 715 232 66 186 chrX 79611987 79612364 -87037932 - MT2A LTR ERVL -140 461 1 1 1192 568 207 28 62 chrX 79612525 79612669 -87037627 - B1_Mur2 SINE Alu -1 148 10 1 1192 225 297 125 0 chrX 79612621 79612685 -87037611 - B4A SINE B4 -150 142 71 1 1192 217 315 63 57 chrX 79613512 79613687 -87036609 - L3 LINE CR1 -2200 2289 2114 1 1192 23 78 0 0 chrX 79614825 79614876 -87035420 + AT_rich Low_complexity Low_complexity 1 51 0 1 1192 722 313 31 31 chrX 79616084 79616341 -87033955 + MTEb LTR MaLR 4 260 -119 1 1192 1044 262 106 3 chrX 79616368 79616671 -87033625 - MTD LTR MaLR -85 334 1 1 1192 1297 35 28 17 chrX 79616923 79617100 -87033196 - L1Md_F3 LINE L1 0 6584 6406 1 1192 350 239 0 0 chrX 79617601 79617693 -87032603 - Lx6 LINE L1 -2 7458 7367 1 1192 239 161 107 0 chrX 79617694 79617750 -87032546 + RLTR21 LTR ERVK 1077 1138 -434 1 1192 5314 245 49 21 chrX 79617750 79618141 -87032155 - Lx6 LINE L1 -171 7289 6871 1 1192 468 0 0 0 chrX 79618141 79618193 -87032103 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 1192 365 58 19 0 chrX 79618193 79618244 -87032052 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1192 5314 245 49 21 chrX 79618244 79619192 -87031104 - Lx6 LINE L1 -590 6870 5912 1 1192 560 340 10 38 chrX 79620104 79620313 -87029983 + RMER13A LTR ERVK 113 366 -542 1 1192 1204 74 0 0 chrX 79620449 79620612 -87029684 - L1_Mus1 LINE L1 0 6567 6405 1 1192 693 88 0 0 chrX 79620613 79620704 -87029592 + L1_Mus1 LINE L1 5828 5918 -649 1 1192 237 178 0 0 chrX 79621778 79621823 -87028473 + T-rich Low_complexity Low_complexity 1 45 0 1 1192 4842 78 17 2 chrX 79621839 79622483 -87027813 - L1_Mus1 LINE L1 0 6567 5914 1 1192 5159 94 8 1 chrX 79622483 79623227 -87027069 + L1_Mm LINE L1 3648 4396 -1487 1 1192 2180 262 53 6 chrX 79623634 79624424 -87025872 + L1_Mur3 LINE L1 17 668 -7060 1 1192 2530 208 25 16 chrX 79624481 79625038 -87025258 + L1_Mur3 LINE L1 547 1108 -6620 1 1192 1393 129 4 0 chrX 79625045 79625277 -87025019 - MusHAL1 LINE L1 -57 2655 2423 1 1192 6073 58 20 14 chrX 79625277 79625960 -87024336 - RLTR13C2 LTR ERVK 0 808 119 1 1192 4153 32 2 2 chrX 79625960 79626455 -87023841 - L1Md_F2 LINE L1 0 6582 6088 1 1192 6073 58 20 14 chrX 79626455 79626574 -87023722 - RLTR13C2 LTR ERVK -690 118 1 1 1192 266 0 29 0 chrX 79626585 79626619 -87023677 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1192 1596 151 30 0 chrX 79626619 79626884 -87023412 - ETnERV3-int LTR ERVK -10 5798 5526 1 1192 261 236 31 92 chrX 79626880 79626978 -87023318 - ETnERV3-int LTR ERVK -415 5393 5302 1 1192 2152 125 3 3 chrX 79626966 79627315 -87022981 - ETnERV3-int LTR ERVK -553 5255 4917 1 1192 839 65 8 0 chrX 79627332 79627455 -87022841 + (TA)n Simple_repeat Simple_repeat 1 124 0 1 1192 7902 87 15 6 chrX 79627455 79628689 -87021607 - MusHAL1 LINE L1 -1504 1849 604 1 1192 7407 90 14 0 chrX 79628672 79630040 -87020256 - L1_Mus1 LINE L1 -1 6566 5170 1 1192 357 100 0 0 chrX 79630035 79630085 -87020211 + L1_Mus1 LINE L1 5031 5080 -803 1 1192 25 65 0 0 chrX 79630337 79630383 -87019913 + AT_rich Low_complexity Low_complexity 1 46 0 1 1192 29 0 0 0 chrX 79630708 79630737 -87019559 + AT_rich Low_complexity Low_complexity 1 29 0 1 1192 5198 169 23 9 chrX 79630737 79631655 -87018641 - Lx4A LINE L1 -7 7051 6121 1 1192 2362 203 41 16 chrX 79631655 79632265 -87018031 + L1_Mur3 LINE L1 1796 2420 -3460 1 1192 248 308 15 15 chrX 79632271 79632406 -87017890 - Lx7 LINE L1 0 7696 7562 1 1192 7852 171 19 5 chrX 79632413 79634544 -87015752 - Lx2 LINE L1 0 6997 4829 1 1192 40438 15 1 6 chrX 79634541 79640700 -87009596 - L1Md_A LINE L1 0 6582 462 1 1192 5932 167 8 8 chrX 79640701 79641806 -87008490 - Lx2 LINE L1 -1034 4843 3739 1 1192 5814 136 8 7 chrX 79641802 79642943 -87007353 - L1VL4 LINE L1 -1666 1893 753 1 1192 207 0 0 0 chrX 79642955 79642978 -87007318 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1192 4517 83 7 2 chrX 79642988 79643603 -87006693 - L1_Mus2 LINE L1 -1 6565 5948 1 1192 834 102 7 0 chrX 79643627 79643764 -87006532 - L1_Mm LINE L1 -4177 1706 1569 1 1192 226 226 48 106 chrX 79643764 79643868 -87006428 - Zaphod2 DNA Tip100 -1869 1655 1558 1 1192 2813 157 20 6 chrX 79643868 79644604 -87005692 - L1Md_F LINE L1 -2444 1373 628 1 1192 421 252 63 30 chrX 79644576 79644776 -87005520 - L1Md_F LINE L1 -5813 706 308 1 1192 336 263 13 147 chrX 79644812 79644968 -87005328 - L1VL1 LINE L1 -6060 362 228 1 1192 435 38 0 0 chrX 79644994 79645047 -87005249 + (CAT)n Simple_repeat Simple_repeat 2 54 0 1 1192 270 0 65 22 chrX 79645047 79645093 -87005203 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 1 1192 1055 95 7 0 chrX 79645103 79645250 -87005046 - B1_Mus1 SINE Alu 0 148 1 1 1192 2132 264 21 4 chrX 79645265 79645790 -87004506 - Lx6 LINE L1 -15 7445 6912 1 1192 204 159 0 22 chrX 79645956 79646001 -87004295 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1 1192 888 149 20 78 chrX 79646566 79646770 -87003526 - Lx3_Mus LINE L1 -10 6999 6808 1 1192 613 333 85 20 chrX 79646886 79647287 -87003009 - L1_Mur3 LINE L1 -7194 518 92 1 1192 360 0 0 0 chrX 79647867 79647907 -87002389 + (TTA)n Simple_repeat Simple_repeat 3 42 0 1 1192 456 345 99 53 chrX 79648680 79648962 -87001334 - MLT1E1A LTR MaLR -108 572 278 1 1192 234 0 0 0 chrX 79649387 79649413 -87000883 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1 1192 508 271 0 0 chrX 79649704 79649837 -87000459 - Lx6 LINE L1 -221 7239 7107 1 1192 651 246 48 0 chrX 79649847 79650014 -87000282 + Lx6 LINE L1 7255 7429 -31 1 1192 506 318 13 13 chrX 79650242 79650392 -86999904 - Lx8 LINE L1 -199 7274 7125 1 1192 612 343 59 0 chrX 79650406 79650642 -86999654 - Lx7 LINE L1 -688 7008 6759 1 1192 1487 223 111 21 chrX 79650657 79651114 -86999182 + RMER20A LTR ERVK 1 509 -7 1 1192 360 0 0 0 chrX 79651127 79651167 -86999129 + (TAA)n Simple_repeat Simple_repeat 1 40 0 1 1192 278 298 57 19 chrX 79651189 79651295 -86999001 - Lx7 LINE L1 -995 6701 6592 1 1192 263 200 0 0 chrX 79651299 79651344 -86998952 - Lx8 LINE L1 -985 6488 6444 1 1192 277 380 45 84 chrX 79651412 79651567 -86998729 + ID_B1 SINE B4 10 158 -66 1 1192 3275 31 8 5 chrX 79652361 79652756 -86997540 - MTA_Mm LTR MaLR 0 396 1 1 1192 367 330 61 26 chrX 79655032 79655262 -86995034 - L1M4 LINE L1 -1367 4779 4542 1 1192 273 361 30 69 chrX 79655605 79655736 -86994560 + B1F2 SINE Alu 15 140 -9 1 1192 19807 152 62 38 chrX 79656057 79658904 -86991392 + L1VL4 LINE L1 700 3478 -2405 1 1192 200 34 0 33 chrX 79658904 79658934 -86991362 + (CCA)n Simple_repeat Simple_repeat 1 29 0 2 1192 19807 139 73 23 chrX 79658934 79660447 -86989849 + L1VL4 LINE L1 3479 5194 -689 1 1192 3608 104 45 2 chrX 79660452 79660981 -86989315 + L1_Mus3 LINE L1 6062 6613 -25 2 1192 449 263 51 7 chrX 79661380 79661518 -86988778 + RMER15 LTR ERVL 422 565 -10 2 1192 2415 192 68 4 chrX 79661581 79661991 -86988305 + RMER1A Other Other 470 886 -144 2 1192 378 0 0 0 chrX 79661991 79662033 -86988263 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1192 2415 192 68 4 chrX 79662033 79662076 -86988220 + RMER1A Other Other 887 952 -78 2 1192 551 307 123 43 chrX 79662942 79663129 -86987167 - MER58A DNA MER1_type -21 203 2 2 1192 21 36 0 0 chrX 79663259 79663287 -86987009 + AT_rich Low_complexity Low_complexity 1 28 0 2 1192 1338 178 83 51 chrX 79663773 79664087 -86986209 - Lx5 LINE L1 -7 7043 6720 2 1192 2885 33 2 117 chrX 79665269 79665681 -86984615 - RLTR10B2 LTR ERVK 0 365 1 2 1192 4130 84 21 99 chrX 79665681 79666350 -86983946 - MMERVK10C-int LTR ERVK 0 7581 6965 2 1192 1585 88 105 0 chrX 79666350 79666588 -86983708 - IAP-d-int LTR ERVK -1287 5255 4993 2 1192 463 313 48 48 chrX 79666585 79666978 -86983318 - MMERVK10C-int LTR ERVK -6017 1564 1172 2 1192 2650 56 0 12 chrX 79667003 79667348 -86982948 - MMERVK10C-int LTR ERVK -995 992 652 2 1192 315 111 0 0 chrX 79667351 79667396 -86982900 - MMERVK10C-int LTR ERVK -6405 137 93 2 1192 1225 80 18 18 chrX 79667416 79667757 -86982539 + (TTTCC)n Simple_repeat Simple_repeat 1 341 0 2 1192 1161 92 2 3 chrX 79667845 79668022 -86982274 - RLTR10-int LTR ERVK -6271 210 41 2 1192 967 199 135 40 chrX 79668028 79668331 -86981965 + IAPEY3_LTR LTR ERVK 1 332 0 2 1192 2073 64 2 13 chrX 79668341 79668640 -86981656 - RLTR10B2 LTR ERVK 0 436 105 2 1192 514 139 75 42 chrX 79668629 79668749 -86981547 - RLTR10B2 LTR ERVK -139 226 103 2 1192 391 66 0 16 chrX 79668749 79668811 -86981485 - RLTR10B2 LTR ERVK -139 153 93 2 1192 484 157 75 42 chrX 79668797 79668917 -86981379 - RLTR10B2 LTR ERVK -139 226 103 2 1192 556 113 75 42 chrX 79668917 79669037 -86981259 - RLTR10B2 LTR ERVK -139 226 103 2 1192 1332 90 44 92 chrX 79669037 79669326 -86980970 - RLTR10B2 LTR ERVK -139 297 1 2 1192 1109 123 6 0 chrX 79669545 79669724 -86980572 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2 1192 2698 289 57 99 chrX 79669770 79670680 -86979616 - Lx5 LINE L1 -32 7018 6169 2 1192 480 16 0 0 chrX 79670680 79670742 -86979554 - L1Md_T LINE L1 0 6582 6521 2 1192 2698 289 57 99 chrX 79670742 79671214 -86979082 - Lx5 LINE L1 -882 6168 5694 2 1192 2722 80 5 8 chrX 79671218 79671598 -86978698 - MTB LTR MaLR 0 400 22 2 1192 385 156 12 83 chrX 79671606 79671652 -86978644 - Lx6 LINE L1 -1768 5692 5651 2 1192 3346 173 154 70 chrX 79671652 79672201 -86978095 - RMER19B LTR ERVK 0 902 231 2 1192 225 0 0 0 chrX 79672201 79672226 -86978070 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1192 3346 173 154 70 chrX 79672226 79672508 -86977788 - RMER19B LTR ERVK -672 230 1 2 1192 385 156 12 83 chrX 79672508 79672545 -86977751 - Lx6 LINE L1 -1810 5650 5615 2 1192 194 360 0 0 chrX 79672714 79672789 -86977507 - MIRb SINE MIR -13 255 181 2 1192 219 323 147 13 chrX 79672855 79673012 -86977284 - MIRb SINE MIR -13 255 78 2 1192 7617 142 34 13 chrX 79673186 79674566 -86975730 - Lx2B LINE L1 -5 6995 5587 2 1192 8190 126 15 31 chrX 79674607 79675789 -86974507 - Lx3B LINE L1 -1 6972 5800 2 1192 1142 76 0 0 chrX 79675789 79675934 -86974362 - B1_Mm SINE Alu 0 147 3 2 1192 8190 151 6 49 chrX 79675934 79676928 -86973368 - Lx3B LINE L1 -84 5802 4838 2 1192 1777 311 20 32 chrX 79676927 79677609 -86972687 - Lx8 LINE L1 -453 7020 6347 2 1192 6016 77 4 0 chrX 79677942 79678759 -86971537 + RLTR22_Mus LTR ERVK 1 820 -988 2 1192 447 19 0 0 chrX 79679247 79679299 -86970997 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1192 472 301 42 30 chrX 79679304 79679459 -86970837 - B3A SINE B2 -46 170 17 2 1192 309 264 30 53 chrX 79679805 79679937 -86970359 - RLTR13D3 LTR ERVK -42 1072 944 2 1192 280 119 0 0 chrX 79680168 79680210 -86970086 - B2_Mm2 SINE B2 -153 42 1 2 1192 1827 221 7 51 chrX 79680890 79680969 -86969327 - Lx5 LINE L1 -3 7047 6969 2 1192 1087 99 116 0 chrX 79680969 79681141 -86969155 + B2_Mm2 SINE B2 1 192 -3 2 1192 1827 221 7 51 chrX 79681141 79681494 -86968802 - Lx5 LINE L1 -82 6968 6634 2 1192 1908 219 95 12 chrX 79681505 79682095 -86968201 - Lx2 LINE L1 -2 6995 6357 2 1192 2611 72 17 3 chrX 79682099 79682448 -86967848 - IAPEY2_LTR LTR ERVK -3 354 1 2 1192 5275 91 5 8 chrX 79682450 79683228 -86967068 - IAPEy-int LTR ERVK -3 7510 6735 2 1192 3126 79 29 2 chrX 79683218 79683660 -86966636 - IAPEy-int LTR ERVK -1367 6214 5761 2 1192 3195 86 0 16 chrX 79683651 79684098 -86966198 - IAPEy-int LTR ERVK -1939 5642 5203 2 1192 256 291 0 55 chrX 79684278 79684369 -86965927 - RMER16-int LTR ERVK -4867 2539 2454 2 1192 343 198 115 11 chrX 79684382 79684469 -86965827 - RLTR19-int LTR ERVK -5077 1060 965 2 1192 21 0 0 0 chrX 79684472 79684493 -86965803 + AT_rich Low_complexity Low_complexity 1 21 0 2 1192 1562 172 106 44 chrX 79684517 79684953 -86965343 - RMER16-int LTR ERVK -4750 656 251 2 1192 1208 154 284 34 chrX 79685065 79685482 -86964814 - IAPEy-int LTR ERVK -6629 952 433 2 1192 2179 141 0 117 chrX 79685909 79686398 -86963898 - IAPEy-int LTR ERVK -7081 432 1 2 1192 2302 61 67 73 chrX 79686403 79686759 -86963537 - IAPEY2_LTR LTR ERVK -3 354 1 2 1192 888 163 0 0 chrX 79686759 79686906 -86963390 - Lx5 LINE L1 -709 6341 6195 2 1192 3405 119 31 31 chrX 79687155 79687710 -86962586 + Lx2 LINE L1 6436 6990 -7 2 1192 23 0 0 0 chrX 79687773 79687796 -86962500 + AT_rich Low_complexity Low_complexity 1 23 0 2 1192 335 374 32 32 chrX 79688602 79688787 -86961509 - L1MB8 LINE L1 -58 6120 5936 2 1192 683 305 62 24 chrX 79688806 79689014 -86961282 - ID_B1 SINE B4 -8 216 1 2 1192 286 298 0 0 chrX 79689038 79689132 -86961164 - L1MB8 LINE L1 -253 5925 5832 2 1192 1857 43 0 4 chrX 79689222 79689455 -86960841 - L1_Mus1 LINE L1 0 6567 6336 2 1192 5366 211 77 24 chrX 79689456 79691505 -86958791 + Lx6 LINE L1 4556 6743 -717 2 1192 884 123 7 0 chrX 79691505 79691651 -86958645 + (GAGAA)n Simple_repeat Simple_repeat 2 148 0 2 1192 5366 250 86 22 chrX 79691651 79691669 -86958627 + Lx6 LINE L1 6744 6763 -697 2 1192 183 80 0 0 chrX 79691669 79691694 -86958602 + (CAGG)n Simple_repeat Simple_repeat 4 28 0 2 18 5366 250 86 22 chrX 79691694 79692315 -86957981 + Lx6 LINE L1 6764 7455 -5 2 1193 279 157 57 0 chrX 79692352 79692422 -86957874 + T-rich Low_complexity Low_complexity 2 75 0 2 1193 423 0 0 0 chrX 79693512 79693559 -86956737 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 1193 405 0 0 0 chrX 79693559 79693603 -86956693 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1193 579 247 78 6 chrX 79693622 79693789 -86956507 - Lx6 LINE L1 -4 7456 7278 2 1193 510 241 7 0 chrX 79693795 79693932 -86956364 - L1M2 LINE L1 -1335 4808 4671 2 1193 1023 319 56 10 chrX 79694050 79694461 -86955835 - Lx9 LINE L1 -867 6777 6348 2 1193 287 264 66 0 chrX 79694569 79694675 -86955621 - L1M2 LINE L1 -1357 4786 4674 2 1193 303 339 29 77 chrX 79694766 79694974 -86955322 + MLT1G3 LTR MaLR 279 476 -119 2 1193 351 224 10 10 chrX 79695007 79695106 -86955190 + L1M3 LINE L1 5336 5434 -734 2 1193 21 57 0 0 chrX 79695816 79695851 -86954445 + AT_rich Low_complexity Low_complexity 1 35 0 2 1193 24 32 0 0 chrX 79697299 79697330 -86952966 + AT_rich Low_complexity Low_complexity 1 31 0 2 1193 315 78 31 15 chrX 79697473 79697538 -86952758 + (TA)n Simple_repeat Simple_repeat 2 67 0 2 1193 1117 82 0 0 chrX 79697589 79697735 -86952561 - B1_Mus2 SINE Alu 0 147 2 2 1193 258 220 30 0 chrX 79697760 79697860 -86952436 + (TA)n Simple_repeat Simple_repeat 1 103 0 2 1193 25 0 0 0 chrX 79698780 79698805 -86951491 + AT_rich Low_complexity Low_complexity 1 25 0 2 1193 6564 150 22 3 chrX 79698932 79700136 -86950160 + L1_Mur2 LINE L1 3708 4934 -943 2 1193 3751 156 19 22 chrX 79700168 79700904 -86949392 - RMER17A LTR ERVK -17 734 1 2 1193 4552 78 4 65 chrX 79700904 79701001 -86949295 - RMER17A-int LTR ERVK 0 1728 1644 2 1193 4496 62 15 10 chrX 79701001 79701585 -86948711 - LTRIS_Mus LTR ERV1 0 587 1 2 1193 4552 78 4 65 chrX 79701585 79702176 -86948120 - RMER17A-int LTR ERVK -85 1643 1083 2 1193 2565 113 29 27 chrX 79702176 79702584 -86947712 - RLTR9E LTR ERVK 0 409 1 2 1193 4552 78 4 65 chrX 79702584 79702621 -86947675 - RMER17A-int LTR ERVK -646 1082 1046 2 1193 311 230 0 22 chrX 79702666 79702755 -86947541 - RMER17A2 LTR ERVK -1 905 819 2 1193 3558 113 76 2 chrX 79702913 79703482 -86946814 + L1_Mus3 LINE L1 6027 6637 -1 2 1193 1071 128 0 0 chrX 79703647 79703795 -86946501 + B1_Mus1 SINE Alu 1 148 0 2 1193 252 100 0 0 chrX 79703795 79703835 -86946461 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 2 1193 278 422 0 0 chrX 79704384 79704486 -86945810 + RSINE1 SINE B4 64 165 0 2 1193 316 253 158 0 chrX 79704654 79704749 -86945547 - B3 SINE B2 -20 196 87 2 1193 454 262 97 58 chrX 79704929 79705136 -86945160 - RMER21B LTR ERV1 -346 496 282 2 1193 262 306 89 36 chrX 79705133 79705245 -86945051 - B3A SINE B2 -76 122 5 2 1193 27 29 0 0 chrX 79705838 79705872 -86944424 + AT_rich Low_complexity Low_complexity 1 34 0 2 1193 21 0 0 0 chrX 79706069 79706090 -86944206 + AT_rich Low_complexity Low_complexity 1 21 0 2 1193 355 360 9 0 chrX 79706117 79706231 -86944065 + LTR33 LTR ERVL 61 175 -340 2 1193 309 279 48 0 chrX 79706235 79706339 -86943957 - ORR1D2 LTR MaLR -4 366 258 2 1193 2389 195 55 4 chrX 79706353 79706883 -86943413 - Lx5 LINE L1 -625 6425 5869 2 1193 2865 201 37 16 chrX 79706881 79707379 -86942917 + Lx5 LINE L1 6414 6905 -145 2 1193 210 37 0 0 chrX 79707379 79707406 -86942890 + (TGGGGG)n Simple_repeat Simple_repeat 3 29 0 2 1193 2865 201 37 16 chrX 79707406 79707525 -86942771 + Lx5 LINE L1 6906 7044 -6 2 1193 1017 252 38 65 chrX 79707591 79707854 -86942442 - ORR1D2 LTR MaLR -112 258 3 2 1193 256 250 0 0 chrX 79709937 79709997 -86940299 - L1_Mur2 LINE L1 -6430 282 223 2 1193 269 248 19 67 chrX 79710008 79710112 -86940184 - Tigger9b DNA MER2_type -183 441 343 2 1193 342 304 35 35 chrX 79710183 79710326 -86939970 - Tigger9b DNA MER2_type -476 148 6 2 1193 3014 40 5 5 chrX 79710963 79711336 -86938960 + L1Md_F3 LINE L1 6211 6583 -1 2 1193 761 323 83 11 chrX 79711813 79712176 -86938120 - Lx8 LINE L1 -206 7267 6879 2 1193 357 24 0 0 chrX 79712253 79712295 -86938001 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1193 1630 346 42 32 chrX 79712298 79713383 -86936913 - Lx9 LINE L1 -185 7459 6364 2 1193 357 193 14 88 chrX 79713463 79713492 -86936804 - ID_B1 SINE B4 -55 237 117 2 1193 787 40 0 0 chrX 79713492 79713592 -86936704 - B1_Mm SINE Alu -12 135 36 2 1193 322 154 12 93 chrX 79713515 79713601 -86936695 - RLTR25B LTR ERVK -520 508 430 2 1193 906 292 53 48 chrX 79713604 79714079 -86936217 - L1_Rod LINE L1 -637 5210 4734 2 1193 1578 266 71 47 chrX 79714069 79714484 -86935812 + L1_Rod LINE L1 3065 3477 -2370 2 1193 312 27 0 0 chrX 79714484 79714521 -86935775 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 1193 1578 266 71 47 chrX 79714521 79714630 -86935666 + L1_Rod LINE L1 3478 3586 -2261 2 1193 4660 40 0 0 chrX 79714630 79715180 -86935116 - L1Md_T LINE L1 0 6582 6033 2 1193 1578 266 71 47 chrX 79715180 79715608 -86934688 + L1_Rod LINE L1 3587 4040 -1807 2 1193 4155 187 40 21 chrX 79715621 79716544 -86933752 + Lx4B LINE L1 5938 6878 -180 2 1193 806 333 109 62 chrX 79716554 79717300 -86932996 + RMER13A LTR ERVK 2 782 -78 2 1193 644 224 16 38 chrX 79717303 79717489 -86932807 + Lx4B LINE L1 6873 7054 -4 2 1193 609 276 40 34 chrX 79717528 79717824 -86932472 + L1_Rod LINE L1 4071 4368 -1479 2 1193 2295 148 44 7 chrX 79718232 79718639 -86931657 - BGLII_Mus LTR ERVK 0 422 1 2 1193 2457 138 22 0 chrX 79718640 79719046 -86931250 + Lx4A LINE L1 6283 6697 -361 2 1193 603 265 9 27 chrX 79719054 79719275 -86931021 + Lx9 LINE L1 5831 6047 -1597 3 1193 3784 247 70 17 chrX 79719383 79720494 -86929802 + Lx9 LINE L1 6289 7458 -186 3 1193 250 194 32 0 chrX 79720772 79720834 -86929462 + L1M2 LINE L1 4565 4628 -1515 3 1193 329 308 0 13 chrX 79720838 79720917 -86929379 - B4A SINE B4 -211 81 4 2 1193 40507 15 0 6 chrX 79721093 79727540 -86922756 - L1Md_A LINE L1 0 6582 221 3 1193 5865 34 1 4 chrX 79727548 79728251 -86922045 - L1Md_F2 LINE L1 -14 6568 5868 3 1193 252 302 40 91 chrX 79728427 79728602 -86921694 + B2_Mm2 SINE B2 1 166 -29 3 1193 1760 176 43 19 chrX 79728652 79729023 -86921273 + Lx9 LINE L1 5362 5741 -106 3 1193 209 208 0 14 chrX 79729055 79729128 -86921168 + (TA)n Simple_repeat Simple_repeat 2 73 0 3 1193 742 287 22 84 chrX 79729131 79729557 -86920739 - MT2A LTR ERVL -40 561 1 3 1193 832 211 176 26 chrX 79729557 79729829 -86920467 + Lx9 LINE L1 5761 6073 -1571 3 1193 3016 175 100 5 chrX 79729912 79730470 -86919826 + RMER19C LTR ERVK 1 611 0 3 1193 1480 241 28 0 chrX 79730592 79730912 -86919384 + Lx9 LINE L1 6312 6640 -1004 3 1193 2606 255 87 2 chrX 79730919 79731714 -86918582 + Lx9 LINE L1 6775 7636 -8 3 1193 554 113 10 0 chrX 79732204 79732301 -86917995 + (GA)n Simple_repeat Simple_repeat 1 98 0 3 1193 255 398 40 10 chrX 79732681 79732780 -86917516 - MamRep137 DNA TcMar? -42 402 301 3 1193 7832 55 3 9 chrX 79734154 79735253 -86915043 - L1Md_F2 LINE L1 -12 6570 5478 3 1193 357 301 158 48 chrX 79735261 79735470 -86914826 - Lx8 LINE L1 -69 7404 7173 3 1193 427 331 45 41 chrX 79735451 79735741 -86914555 - Lx8 LINE L1 -1093 6380 6090 3 1193 506 321 0 0 chrX 79736777 79736908 -86913388 + RSINE1 SINE B4 4 134 -31 3 1193 432 0 0 0 chrX 79736909 79736957 -86913339 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1193 21 57 0 0 chrX 79737135 79737170 -86913126 + AT_rich Low_complexity Low_complexity 1 35 0 3 1193 351 346 31 43 chrX 79737274 79737437 -86912859 + MER20 DNA MER1_type 55 215 -4 3 1193 23 0 0 0 chrX 79737536 79737559 -86912737 + AT_rich Low_complexity Low_complexity 1 23 0 3 1193 2434 162 63 27 chrX 79737635 79738112 -86912184 - Lx2B LINE L1 0 7000 6507 3 1193 2221 189 27 11 chrX 79738113 79738557 -86911739 + Lx2B LINE L1 6058 6508 -492 3 1193 309 357 7 56 chrX 79739197 79739355 -86910941 - B3A SINE B2 0 216 57 3 1193 242 318 82 0 chrX 79739299 79739384 -86910912 - B4A SINE B4 -173 119 28 3 1193 7519 75 11 2 chrX 79739520 79740541 -86909755 - L1Md_F2 LINE L1 0 6582 5556 3 1193 267 273 61 20 chrX 79740552 79740653 -86909643 + B1F SINE Alu 1 141 -8 3 1193 306 0 0 0 chrX 79741000 79741034 -86909262 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1193 2997 237 59 21 chrX 79743334 79744011 -86906285 - Lx6 LINE L1 -9 7451 6749 3 1193 29 0 0 0 chrX 79744025 79744054 -86906242 + AT_rich Low_complexity Low_complexity 1 29 0 3 1193 489 130 11 0 chrX 79744059 79744151 -86906145 - L1_Mus3 LINE L1 0 6638 6546 3 1193 482 73 15 0 chrX 79744148 79744216 -86906080 + L1_Mus2 LINE L1 6305 6373 -193 3 1193 3794 201 99 16 chrX 79744213 79745786 -86904510 - Lx6 LINE L1 -727 6733 5030 3 1193 728 205 12 43 chrX 79745986 79746149 -86904147 + B2_Mm2 SINE B2 1 158 -37 3 1193 414 0 0 0 chrX 79746155 79746201 -86904095 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 3 1193 209 130 43 0 chrX 79746380 79746426 -86903870 + (TATG)n Simple_repeat Simple_repeat 4 51 0 3 1193 25 65 0 0 chrX 79748398 79748444 -86901852 + AT_rich Low_complexity Low_complexity 1 46 0 3 1193 269 259 119 11 chrX 79748453 79748629 -86901667 + L1M4 LINE L1 5162 5356 -790 3 1193 748 311 50 41 chrX 79748699 79748994 -86901302 - Lx9 LINE L1 -345 7299 7000 3 1193 252 0 0 0 chrX 79748994 79749022 -86901274 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 3 1193 748 311 50 41 chrX 79749022 79749068 -86901228 - Lx9 LINE L1 -645 6999 6955 3 1193 689 234 26 5 chrX 79749088 79749281 -86901015 - Lx2B LINE L1 -854 6146 5950 3 1193 25 31 0 0 chrX 79749281 79749313 -86900983 + AT_rich Low_complexity Low_complexity 1 32 0 3 1193 31988 81 5 31 chrX 79749387 79751783 -86898513 - L1Md_F2 LINE L1 -12 6570 4186 3 1193 1568 161 9 71 chrX 79751783 79752123 -86898173 - RLTRETN_Mm LTR ERVK -2 320 2 3 1193 31988 84 8 40 chrX 79752123 79753384 -86896912 - L1Md_F2 LINE L1 -1698 4185 3092 3 1193 4342 10 0 0 chrX 79753384 79753866 -86896430 + LTRIS_Mm LTR ERV1 1 482 0 3 1193 31988 100 6 49 chrX 79753866 79756411 -86893885 - L1Md_F2 LINE L1 -2792 3091 591 3 1193 266 143 0 0 chrX 79756465 79756507 -86893789 + RLTR10E LTR ERVK 270 311 0 3 1193 2075 140 22 34 chrX 79756507 79756862 -86893434 - Lx2 LINE L1 -40 6957 6607 3 1193 21 0 0 0 chrX 79757577 79757598 -86892698 + AT_rich Low_complexity Low_complexity 1 21 0 3 1193 854 239 31 95 chrX 79757656 79758163 -86892133 + RLTR11B LTR ERVK 1 494 -34 3 1193 279 0 0 0 chrX 79758517 79758548 -86891748 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1193 3242 124 20 0 chrX 79758589 79759079 -86891217 - L1_Mus1 LINE L1 -2 6565 6066 3 1193 7476 73 8 0 chrX 79759080 79760280 -86890016 + L1Md_F2 LINE L1 4870 6082 -500 3 1193 830 128 74 15 chrX 79760329 79760464 -86889832 + B1_Mus2 SINE Alu 5 147 0 3 1193 571 267 36 94 chrX 79760567 79760790 -86889506 + B3 SINE B2 1 210 -6 3 1193 1021 245 5 88 chrX 79760899 79761218 -86889078 + L1VL1 LINE L1 13 496 -5926 3 1193 229 250 15 0 chrX 79761351 79761419 -86888877 + L1Md_F LINE L1 656 724 -5795 3 1193 25913 157 10 15 chrX 79761472 79762113 -86888183 + L1_Mus2 LINE L1 668 1306 -4577 3 1193 1132 62 0 7 chrX 79762113 79762248 -86888048 + B1_Mm SINE Alu 3 137 -10 3 1193 195 42 0 0 chrX 79762248 79762272 -86888024 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1193 25913 127 37 55 chrX 79762281 79763346 -86886950 + L1_Mus2 LINE L1 1307 2363 -3520 3 1193 1159 112 0 16 chrX 79763346 79763536 -86886760 + L1_Mus1 LINE L1 6380 6566 -1 3 1193 25913 117 44 51 chrX 79763536 79767753 -86882543 + L1_Mus2 LINE L1 2364 6565 -1 3 1193 195 42 0 0 chrX 79767788 79767812 -86882484 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 3 1193 419 275 105 11 chrX 79768690 79769010 -86881286 - L1M3 LINE L1 -1134 5012 4666 3 1193 667 295 27 21 chrX 79769022 79769189 -86881107 - B3A SINE B2 0 198 31 3 1193 583 287 115 29 chrX 79769189 79769397 -86880899 - ORR1D1 LTR MaLR -2 382 157 3 1193 219 157 0 0 chrX 79769397 79769448 -86880848 + GA-rich Low_complexity Low_complexity 2 52 0 3 1193 824 183 5 100 chrX 79769448 79769648 -86880648 - ORR1D1 LTR MaLR -193 181 1 3 1193 908 134 24 54 chrX 79770027 79770193 -86880103 + RMER6C LTR ERVK 1 161 -529 3 1193 409 296 34 28 chrX 79770234 79770411 -86879885 - RLTR23 LTR ERV1 0 430 253 3 1193 460 163 11 44 chrX 79770613 79770703 -86879593 - RLTR23 LTR ERV1 -336 94 8 3 1193 4461 156 42 60 chrX 79770841 79771179 -86879117 - RLTR19-int LTR ERVK -1767 4370 4034 3 1193 391 141 39 0 chrX 79771179 79771257 -86879039 + Lx3B LINE L1 6890 6970 -3 3 1193 4461 156 42 60 chrX 79771257 79771888 -86878408 - RLTR19-int LTR ERVK -2104 4033 3418 3 1193 256 253 24 12 chrX 79771938 79772022 -86878274 - RLTR19-int LTR ERVK -2864 3273 3189 3 1193 3473 172 154 36 chrX 79772034 79772998 -86877298 - RLTR19-int LTR ERVK -3027 3110 2034 3 1193 3293 208 199 31 chrX 79773003 79773360 -86876936 - RLTR19-int LTR ERVK -4286 1851 1367 3 1193 399 41 0 0 chrX 79773360 79773409 -86876887 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1193 3293 204 94 55 chrX 79773409 79774338 -86875958 - RLTR19-int LTR ERVK -4771 1366 415 3 1193 664 209 45 9 chrX 79774608 79774775 -86875521 - RLTR19-int LTR ERVK -4792 614 337 3 1193 685 262 54 33 chrX 79775287 79775528 -86874768 - RMER16 LTR ERVK 0 533 288 3 1193 271 172 90 108 chrX 79775607 79775732 -86874564 - RMER16 LTR ERVK -453 80 1 3 1193 7948 37 27 0 chrX 79775774 79777170 -86873126 - L1Md_F3 LINE L1 0 6584 5151 3 1193 747 200 48 82 chrX 79777183 79777512 -86872784 + RMER6A LTR ERVK 472 704 -52 3 1193 37688 15 2 7 chrX 79777615 79782815 -86867481 + L1Md_A LINE L1 420 5586 -297 3 1193 8752 14 1 0 chrX 79782815 79783809 -86866487 + L1Md_A LINE L1 5587 6581 -1 3 1193 334 261 0 0 chrX 79784042 79784111 -86866185 + B1_Mur3 SINE Alu 81 149 0 3 1193 22 56 0 0 chrX 79784604 79784640 -86865656 + AT_rich Low_complexity Low_complexity 1 36 0 3 1193 21 36 0 0 chrX 79785070 79785098 -86865198 + AT_rich Low_complexity Low_complexity 1 28 0 3 1193 252 250 0 0 chrX 79785300 79785364 -86864932 - Lx6 LINE L1 -221 7239 7176 3 1193 6824 140 23 4 chrX 79785406 79786632 -86863664 - Lx LINE L1 -732 5922 4685 3 1193 4332 124 60 8 chrX 79786632 79787337 -86862959 + Lx LINE L1 5906 6646 -8 3 1193 1098 282 68 20 chrX 79787399 79787797 -86862499 - Lx6 LINE L1 -334 7126 6710 3 1193 8289 194 53 11 chrX 79787792 79789597 -86860699 - L1_Mur3 LINE L1 -105 5775 3895 3 1193 1114 158 0 10 chrX 79789613 79789805 -86860491 + MT2B LTR ERVL 402 591 -10 3 1193 3176 229 79 19 chrX 79789807 79789887 -86860409 - Lx9 LINE L1 -71 7573 7489 3 1193 201 121 0 0 chrX 79789887 79789920 -86860376 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1193 3176 229 79 19 chrX 79789920 79790728 -86859568 - Lx9 LINE L1 -156 7488 6633 3 1193 716 258 273 57 chrX 79790749 79791346 -86858950 - Lx9 LINE L1 -1123 6521 5796 3 1193 319 346 29 10 chrX 79791358 79791562 -86858734 - L1M3 LINE L1 -405 5784 5577 3 1193 1177 73 0 12 chrX 79792338 79792504 -86857792 + L1Md_F2 LINE L1 6407 6570 -12 3 1193 1625 311 74 43 chrX 79792759 79793498 -86856798 - Lx8 LINE L1 -274 7199 6438 3 1193 198 0 0 0 chrX 79793505 79793527 -86856769 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 3 1193 381 288 339 4 chrX 79793562 79793798 -86856498 - MTD LTR MaLR 0 421 107 3 1193 1749 186 3 0 chrX 79793799 79794100 -86856196 + Lx3C LINE L1 6481 6782 -194 3 1193 694 180 167 18 chrX 79794375 79794608 -86855688 + Lx3C LINE L1 6727 7000 0 3 1193 249 159 0 0 chrX 79794687 79794731 -86855565 + T-rich Low_complexity Low_complexity 1 44 0 3 1193 1182 57 0 0 chrX 79794733 79794874 -86855422 - B1_Mm SINE Alu -6 141 1 3 1193 405 0 0 0 chrX 79794900 79794945 -86855351 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 3 1193 353 227 163 8 chrX 79794955 79795084 -86855212 - MTD-int LTR MaLR -6 1252 1104 3 1193 424 0 36 0 chrX 79795108 79795164 -86855132 + (CAAA)n Simple_repeat Simple_repeat 2 59 0 3 1193 27552 163 31 92 chrX 79795199 79796742 -86853554 + L1_Mus1 LINE L1 270 1775 -4108 3 1193 1110 82 0 0 chrX 79796742 79796888 -86853408 - B1_Mm SINE Alu 0 147 2 3 1193 27552 117 31 10 chrX 79796888 79801595 -86848701 + L1_Mus1 LINE L1 1776 6565 -2 3 1193 7805 50 4 12 chrX 79801631 79802623 -86847673 + L1Md_F3 LINE L1 5587 6570 -14 3 1193 3278 282 41 55 chrX 79802627 79803733 -86846563 - MTD-int LTR MaLR -167 1091 2 3 1193 1234 251 129 26 chrX 79803742 79804082 -86846214 - MTD LTR MaLR -13 406 32 3 1193 1603 284 105 111 chrX 79804089 79804283 -86846013 - RMER12 LTR ERVK -103 1219 1017 3 1193 498 17 0 0 chrX 79804283 79804342 -86845954 + (CAAG)n Simple_repeat Simple_repeat 2 60 0 3 1193 1603 284 105 111 chrX 79804342 79804386 -86845910 - RMER12 LTR ERVK -306 1016 995 3 1193 1011 100 0 29 chrX 79804386 79804561 -86845735 + (GGAGA)n Simple_repeat Simple_repeat 2 171 0 3 1193 1603 284 105 111 chrX 79804561 79805547 -86844749 - RMER12 LTR ERVK -328 994 1 3 1193 766 308 49 24 chrX 79805600 79805929 -86844367 - Lx8 LINE L1 -1075 6398 6062 3 1193 317 393 30 10 chrX 79806090 79806288 -86844008 + Lx8 LINE L1 7116 7317 -156 3 1193 743 282 66 63 chrX 79806482 79807011 -86843285 - Lx8 LINE L1 -250 5918 5366 3 1193 453 357 0 6 chrX 79807376 79807534 -86842762 + RSINE1 SINE B4 3 159 -6 3 1193 28 0 0 0 chrX 79807534 79807562 -86842734 + AT_rich Low_complexity Low_complexity 1 28 0 3 1193 476 387 39 46 chrX 79807760 79808042 -86842254 + B4 SINE B4 13 292 0 4 1193 357 24 0 0 chrX 79808121 79808163 -86842133 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1193 423 245 47 81 chrX 79808163 79808421 -86841875 + Charlie1a DNA MER1_type 1073 1321 -134 4 1193 189 323 30 15 chrX 79808501 79808567 -86841729 + L2c LINE L2 3068 3134 -253 4 1193 22 0 0 0 chrX 79808828 79808850 -86841446 + AT_rich Low_complexity Low_complexity 1 22 0 4 1193 234 377 58 0 chrX 79809015 79809153 -86841143 - Helitron2Na_Mam RC Helitron? -178 146 1 4 1193 21 0 0 0 chrX 79809586 79809607 -86840689 + AT_rich Low_complexity Low_complexity 1 21 0 4 1193 273 352 8 53 chrX 79810195 79810327 -86839969 + MLT1G1 LTR MaLR 153 278 -317 4 1193 434 373 75 0 chrX 79810368 79810580 -86839716 + MLT1G1 LTR MaLR 350 577 -2 4 1193 430 160 48 29 chrX 79811289 79811392 -86838904 - Lx9 LINE L1 -8 7636 7532 4 1193 684 217 63 69 chrX 79811399 79811607 -86838689 - ORR1D1 LTR MaLR -20 364 160 4 1193 896 285 15 6 chrX 79811589 79811853 -86838443 - ORR1D1 LTR MaLR -102 268 1 4 1193 1438 226 15 32 chrX 79811853 79812019 -86838277 - ORR1D1-int LTR MaLR 0 1370 1204 4 1193 279 71 0 0 chrX 79812019 79812061 -86838235 + (CAAAT)n Simple_repeat Simple_repeat 2 43 0 4 1193 1438 226 15 32 chrX 79812061 79812237 -86838059 - ORR1D1-int LTR MaLR -167 1203 1034 4 1193 333 261 11 0 chrX 79812220 79812308 -86837988 - ORR1D1-int LTR MaLR -1281 89 1 4 1193 277 165 82 10 chrX 79812308 79812369 -86837927 - ORR1D1 LTR MaLR 0 378 305 4 1193 625 330 78 90 chrX 79812433 79812935 -86837361 - RMER21B LTR ERV1 -346 496 1 4 1193 1298 98 96 22 chrX 79812957 79813186 -86837110 - Lx LINE L1 -7 6647 6402 4 1193 1457 92 0 0 chrX 79813190 79813386 -86836910 + Lx LINE L1 6117 6312 -342 4 1193 653 256 156 29 chrX 79813386 79813677 -86836619 - ORR1C2 LTR MaLR -26 358 1 4 1193 360 240 0 0 chrX 79813695 79813795 -86836501 + (TA)n Simple_repeat Simple_repeat 1 100 0 4 1193 1261 215 56 44 chrX 79813795 79813889 -86836407 - Lx9 LINE L1 -127 7517 7420 4 1193 480 48 0 0 chrX 79813889 79813952 -86836344 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1193 1261 215 56 44 chrX 79813952 79814178 -86836118 - Lx9 LINE L1 -225 7419 7194 4 1193 6473 147 9 5 chrX 79814812 79815913 -86834383 - Lx2 LINE L1 0 6997 5893 4 1193 1170 157 0 0 chrX 79815913 79816104 -86834192 + L1_Mur1 LINE L1 4672 4862 -1024 4 1193 3217 162 75 5 chrX 79816119 79816733 -86833563 - Lx4A LINE L1 0 7058 6402 4 1193 224 30 0 29 chrX 79818738 79818772 -86831524 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 4 1193 1067 66 7 0 chrX 79818793 79818929 -86831367 - B1_Mus2 SINE Alu -9 138 2 4 1193 545 309 8 39 chrX 79819426 79819685 -86830611 + L1_Rod LINE L1 465 715 -6457 4 1193 216 0 0 0 chrX 79819942 79819966 -86830330 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 1193 630 184 217 19 chrX 79819966 79820127 -86830169 + Lx9 LINE L1 6354 6546 -1098 4 1193 611 98 0 11 chrX 79820127 79820220 -86830076 - RLTR22_Mur LTR ERVK 0 1848 1757 4 1193 1572 110 13 0 chrX 79820227 79820463 -86829833 + L1_Mus3 LINE L1 6398 6636 -2 4 1193 28 0 0 0 chrX 79820469 79820497 -86829799 + AT_rich Low_complexity Low_complexity 1 28 0 4 1193 1061 126 0 0 chrX 79820986 79821145 -86829151 - RLTR22_Mur LTR ERVK -99 1749 1591 4 1193 5193 102 12 21 chrX 79821434 79821808 -86828488 - RLTR22_Mus LTR ERVK -997 811 434 4 1193 592 57 37 37 chrX 79821808 79821917 -86828379 + L1Md_F2 LINE L1 6474 6582 0 4 1193 5193 102 12 21 chrX 79821917 79822344 -86827952 - RLTR22_Mus LTR ERVK -1375 433 17 4 149 5056 97 13 18 chrX 79822355 79823225 -86827071 - Lx3A LINE L1 -1021 5960 5106 4 1194 7492 122 151 7 chrX 79823235 79824822 -86825474 - L1_Mus4 LINE L1 -1 6635 4694 4 1194 9376 103 6 6 chrX 79824818 79826274 -86824022 - L1_Mus4 LINE L1 -1944 3942 2488 4 1194 2545 114 27 7 chrX 79826757 79826960 -86823336 - BGLII_Mus LTR ERVK 0 422 216 4 1194 306 0 0 0 chrX 79826960 79826994 -86823302 + (TC)n Simple_repeat Simple_repeat 2 35 0 4 1194 2545 114 27 7 chrX 79826994 79827204 -86823092 - BGLII_Mus LTR ERVK -207 215 2 4 1194 896 254 88 67 chrX 79827242 79827673 -86822623 - RMER10A LTR ERVL -2 440 1 4 1194 471 284 135 0 chrX 79828405 79828553 -86821743 + RMER1C Other Other 22 189 -1153 4 1194 8092 41 1 0 chrX 79828552 79830142 -86820154 - L1Md_F2 LINE L1 0 6582 4991 4 1194 417 226 56 19 chrX 79830128 79830236 -86820060 + RMER1C Other Other 154 265 -1077 4 1194 1429 286 71 24 chrX 79830481 79830864 -86819432 + RMER1C Other Other 642 1054 -288 4 1194 853 112 67 0 chrX 79830864 79830998 -86819298 + B1_Mus1 SINE Alu 5 147 -1 4 1194 1429 286 71 24 chrX 79830998 79831079 -86819217 + RMER1C Other Other 1055 1128 -214 4 1194 3024 204 16 34 chrX 79831373 79832042 -86818254 - MYSERV6-int LTR ERVK -2 8957 8301 4 1194 1928 139 3 3 chrX 79832043 79832339 -86817957 - RLTR10E LTR ERVK -15 296 1 4 1194 354 40 80 0 chrX 79832339 79832389 -86817907 - MYSERV6-int LTR ERVK -647 8312 8259 4 1194 1860 182 70 2 chrX 79832391 79832793 -86817503 - MYSERV-int LTR ERVK -790 5760 5332 4 1194 495 268 74 63 chrX 79832794 79832969 -86817327 - RMER4A LTR ERVK -28 438 262 4 1194 967 291 36 121 chrX 79832974 79833536 -86816760 - MYSERV-int LTR ERVK -1418 5132 4619 4 1194 2629 139 0 16 chrX 79833551 79833982 -86816314 - Lx2 LINE L1 -973 6024 5601 4 1194 2181 146 10 35 chrX 79833978 79834376 -86815920 + Lx2 LINE L1 6005 6392 -605 4 1194 8911 7 0 0 chrX 79834473 79836017 -86814279 - L1Md_A LINE L1 0 6582 5039 4 1194 11628 205 66 34 chrX 79836199 79837677 -86812619 - MYSERV6-int LTR ERVK -4344 4615 2652 4 1194 1000 88 0 45 chrX 79837677 79837832 -86812464 + B1_Mus1 SINE Alu 1 148 0 4 1194 11628 204 67 34 chrX 79837832 79838523 -86811773 - MYSERV6-int LTR ERVK -5877 3082 2401 4 1194 3190 184 7 17 chrX 79838523 79838846 -86811450 - Lx2B LINE L1 -1 6999 6682 4 1194 2341 104 48 89 chrX 79838846 79839341 -86810955 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1194 3190 184 7 17 chrX 79839341 79839613 -86810683 - Lx2B LINE L1 -319 6681 6410 4 1194 11628 204 67 34 chrX 79839613 79840408 -86809888 - MYSERV6-int LTR ERVK -6559 2400 1590 4 1194 1377 335 31 3 chrX 79840864 79841516 -86808780 - MYSERV6-int LTR ERVK -7876 1083 414 4 1194 570 302 55 18 chrX 79842364 79842637 -86807659 - RLTR15 LTR ERVK -76 283 1 4 1194 599 326 10 10 chrX 79842637 79842829 -86807467 - Lx5 LINE L1 -4 7046 6855 4 1194 586 156 4 6 chrX 79842824 79842923 -86807373 - Lx5 LINE L1 -524 6526 6445 4 1194 314 205 127 13 chrX 79842934 79843013 -86807283 - RMER1C Other Other -94 1248 1161 4 1194 2507 176 6 4 chrX 79843044 79843535 -86806761 - L1_Mur2 LINE L1 -3097 2789 2298 4 1194 15503 186 20 30 chrX 79843532 79845124 -86805172 + L1VL4 LINE L1 511 2078 -3805 4 1194 180 0 0 0 chrX 79845124 79845144 -86805152 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 4 1194 15503 152 21 29 chrX 79845144 79847241 -86803055 + L1VL4 LINE L1 2079 4170 -1713 4 1194 3494 109 4 10 chrX 79847431 79847951 -86802345 + L1VL4 LINE L1 5283 5799 -84 4 1194 21 0 0 0 chrX 79847951 79847972 -86802324 + AT_rich Low_complexity Low_complexity 1 21 0 4 1194 41152 4 0 0 chrX 79847974 79854323 -86795973 - L1Md_A LINE L1 0 6582 231 4 1194 4088 86 21 0 chrX 79854322 79854880 -86795416 + L1_Mus3 LINE L1 5784 6353 -285 4 1194 379 139 0 0 chrX 79854880 79854966 -86795330 + L1_Mus4 LINE L1 6549 6634 -2 4 1194 4105 213 33 35 chrX 79854966 79855033 -86795263 - L1_Mur2 LINE L1 -3574 2303 2256 4 1194 864 82 15 7 chrX 79855033 79855169 -86795127 + (GAGAA)n Simple_repeat Simple_repeat 4 140 0 4 1194 4105 213 33 35 chrX 79855169 79855382 -86794914 - L1_Mur2 LINE L1 -3622 2255 2050 4 1194 660 56 0 0 chrX 79855382 79855471 -86794825 + (TG)n Simple_repeat Simple_repeat 2 90 0 4 1194 4105 212 45 30 chrX 79855471 79856304 -86793992 - L1_Mur2 LINE L1 -3828 2049 1187 4 1194 396 0 0 0 chrX 79856304 79856348 -86793948 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 1194 1284 205 103 8 chrX 79856348 79856565 -86793731 - L1_Mur2 LINE L1 -5900 1186 941 4 1194 405 0 0 0 chrX 79856585 79856630 -86793666 + (T)n Simple_repeat Simple_repeat 1 45 0 4 1194 2966 177 29 105 chrX 79856988 79857721 -86792575 - RMER6C LTR ERVK 0 690 14 4 1194 1021 293 32 58 chrX 79857734 79858078 -86792218 - Lx7 LINE L1 -604 7092 6758 4 1194 238 172 0 33 chrX 79858174 79858234 -86792062 + (TTA)n Simple_repeat Simple_repeat 2 59 0 4 1194 21 0 0 0 chrX 79858958 79858979 -86791317 + AT_rich Low_complexity Low_complexity 1 21 0 4 1194 24 32 0 0 chrX 79859343 79859374 -86790922 + AT_rich Low_complexity Low_complexity 1 31 0 4 1194 225 0 0 0 chrX 79859900 79859925 -86790371 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 4 1194 7925 150 44 5 chrX 79859926 79860957 -86789339 - Lx3C LINE L1 0 7000 5911 4 1194 261 0 0 0 chrX 79860957 79860986 -86789310 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 1194 15584 137 22 33 chrX 79860986 79863835 -86786461 - Lx3C LINE L1 -1066 5910 3095 4 1194 3156 167 20 33 chrX 79863847 79864543 -86785753 - Lx3C LINE L1 -4530 1356 674 4 1194 238 217 0 0 chrX 79864615 79864661 -86785635 - Lx9 LINE L1 -457 7187 7142 4 1194 3839 92 41 5 chrX 79864756 79865312 -86784984 + Lx3_Mus LINE L1 6434 7009 0 4 1194 26 0 0 0 chrX 79865312 79865338 -86784958 + AT_rich Low_complexity Low_complexity 1 26 0 4 1194 415 198 225 33 chrX 79865344 79865464 -86784832 - Lx9 LINE L1 -510 7134 6992 4 1194 237 268 40 111 chrX 79865551 79865627 -86784669 + L1M3 LINE L1 3689 3769 -2371 4 1194 1038 34 7 39 chrX 79865627 79865782 -86784514 - L1Md_F2 LINE L1 0 6582 6433 4 1194 237 268 40 111 chrX 79865782 79865831 -86784465 + L1M3 LINE L1 3770 3805 -2335 4 1194 870 101 3 2 chrX 79865831 79865974 -86784322 - L1_Mm LINE L1 -3650 2197 2051 4 1194 4966 88 21 7 chrX 79865976 79866677 -86783619 - L1Md_F2 LINE L1 -12 6570 5860 4 1194 28788 101 9 10 chrX 79866677 79871550 -86778746 - L1Md_F2 LINE L1 -574 5309 483 4 1194 282 87 0 0 chrX 79871612 79871658 -86778638 + (T)n Simple_repeat Simple_repeat 1 46 0 4 1194 2617 113 52 16 chrX 79872430 79872854 -86777442 + L1_Mus4 LINE L1 6198 6636 0 4 1194 310 200 0 0 chrX 79873943 79873993 -86776303 - Lx6 LINE L1 -602 6858 6809 4 1194 1379 159 12 4 chrX 79873993 79874239 -86776057 - L1_Mur3 LINE L1 -10 5870 5623 4 1194 719 220 43 0 chrX 79874387 79874528 -86775768 - L1_Mur3 LINE L1 -259 5621 5475 4 1194 1268 264 26 27 chrX 79874532 79875106 -86775190 - L1_Mur3 LINE L1 -4449 1431 860 4 1194 5346 212 37 11 chrX 79875488 79876334 -86773962 - Lx5 LINE L1 -53 6997 6122 4 1194 3012 60 13 0 chrX 79876334 79876717 -86773579 - RLTR10 LTR ERVK -2 388 1 4 1194 5346 212 37 11 chrX 79876717 79876962 -86773334 - Lx5 LINE L1 -929 6121 5878 4 1194 1818 179 20 42 chrX 79876964 79877320 -86772976 + ORR1B1 LTR MaLR 47 394 0 4 1194 8229 185 35 88 chrX 79877321 79879394 -86770902 + ORR1B1-int LTR MaLR 2 1963 0 4 1194 1367 199 30 139 chrX 79879402 79879798 -86770498 + ORR1B1 LTR MaLR 42 394 0 4 1194 7651 202 141 58 chrX 79879806 79882966 -86767330 - Lx5 LINE L1 -17 5860 1764 4 1194 3232 41 5 12 chrX 79882966 79883365 -86766931 + MTA_Mm LTR MaLR 1 396 0 4 1194 4207 238 42 102 chrX 79883365 79884104 -86766192 - Lx5 LINE L1 -4123 1763 979 4 1194 2269 331 47 15 chrX 79884607 79885584 -86764712 - Lx8 LINE L1 -29 7444 6437 4 1194 244 319 62 31 chrX 79886171 79886262 -86764034 + MLT1A1 LTR MaLR 201 338 -70 4 1194 216 0 0 0 chrX 79886262 79886286 -86764010 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1194 244 310 34 11 chrX 79886286 79886326 -86763970 + MLT1A1 LTR MaLR 339 379 -29 4 1194 868 120 44 6 chrX 79886520 79886679 -86763617 - L1_Mus3 LINE L1 -5 6633 6469 4 1194 288 338 0 0 chrX 79886747 79886821 -86763475 - ID4 SINE ID -3 80 7 4 1194 251 286 0 23 chrX 79886856 79886942 -86763354 - Lx7 LINE L1 -12 7684 7601 4 1194 492 158 0 0 chrX 79887039 79887134 -86763162 + GA-rich Low_complexity Low_complexity 6 100 0 4 1194 671 328 62 22 chrX 79887139 79887413 -86762883 - Lx7 LINE L1 -393 7303 7019 4 1194 291 348 34 0 chrX 79887424 79887513 -86762783 + B3 SINE B2 68 159 -57 4 1194 22 56 0 0 chrX 79887676 79887712 -86762584 + AT_rich Low_complexity Low_complexity 1 36 0 4 1194 305 311 158 0 chrX 79887979 79888169 -86762127 - MARNA DNA Mariner -226 360 141 4 1194 4240 75 3 3 chrX 79888214 79888786 -86761510 - L1_Mus2 LINE L1 -2 6564 5993 4 1194 2841 44 0 121 chrX 79889515 79889930 -86760366 + RLTR10B2 LTR ERVK 1 365 0 4 1194 1301 67 0 6 chrX 79889930 79890109 -86760187 + RLTR10-int LTR ERVK 1 178 -7403 4 1194 799 150 9 32 chrX 79890159 79890387 -86759909 + A-rich Low_complexity Low_complexity 1 222 0 5 1194 330 89 0 0 chrX 79890387 79890432 -86759864 + RLTR10-int LTR ERVK 93 137 -6405 4 1194 2619 67 0 0 chrX 79890435 79890776 -86759520 + RLTR10-int LTR ERVK 652 992 -995 4 1194 434 304 23 23 chrX 79890916 79891194 -86759102 + IAPEY3-int LTR ERVK 822 1012 -5530 5 1194 338 158 0 0 chrX 79891213 79891270 -86759026 + IAP-d-int LTR ERVK 447 503 -6039 5 1194 1415 103 112 0 chrX 79891270 79891494 -86758802 + IAP-d-int LTR ERVK 5007 5255 -1287 5 1194 3956 115 12 3 chrX 79891494 79892178 -86758118 + IAPEY3-int LTR ERVK 6965 7680 0 5 1194 2747 41 0 167 chrX 79892178 79892616 -86757680 + RLTR10B2 LTR ERVK 1 365 0 5 1194 309 26 0 0 chrX 79893016 79893054 -86757242 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1194 306 0 0 0 chrX 79893054 79893087 -86757209 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 1194 532 298 6 0 chrX 79893207 79893378 -86756918 + L1MEc LINE L1 497 668 -5732 5 1194 1545 233 67 10 chrX 79894091 79894494 -86755802 - Lx6 LINE L1 -41 7419 6994 5 1194 234 0 0 0 chrX 79894531 79894557 -86755739 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 1194 614 228 7 46 chrX 79894833 79894985 -86755311 + B1_Mur4 SINE Alu 3 148 -2 5 1194 929 135 6 0 chrX 79894986 79895149 -86755147 + (GAAA)n Simple_repeat Simple_repeat 3 166 0 5 1194 230 342 8 86 chrX 79895383 79895405 -86754891 - ID_B1 SINE B4 -16 208 91 5 1194 439 295 0 9 chrX 79895405 79895511 -86754785 - B1F SINE Alu -35 114 10 5 1194 390 309 77 5 chrX 79895517 79895712 -86754584 + L1MEc LINE L1 1982 2190 -4210 5 1194 3797 141 70 21 chrX 79895741 79896705 -86753591 + L1VL1 LINE L1 219 1239 -2459 5 1194 20806 16 1 11 chrX 79896704 79900065 -86750231 + L1Md_A LINE L1 439 3758 -2125 5 1194 33766 35 0 1 chrX 79900066 79905615 -86744681 + L1Md_T LINE L1 1 5589 -297 5 1194 8969 6 0 4 chrX 79905615 79906667 -86743629 + L1Md_T LINE L1 5590 6585 0 5 1194 5697 13 0 0 chrX 79906667 79907356 -86742940 + L1Md_A LINE L1 3746 4434 -1449 5 1194 524 79 0 13 chrX 79907353 79907416 -86742880 + L1Md_A LINE L1 5525 5587 -296 5 1194 8772 18 0 0 chrX 79907416 79908411 -86741885 + L1Md_A LINE L1 5588 6582 0 5 1194 7802 122 12 6 chrX 79908411 79909792 -86740504 + L1VL1 LINE L1 1227 2615 -1083 5 1194 1277 128 14 0 chrX 79909812 79910031 -86740265 + L1_Mus2 LINE L1 5120 5341 -542 5 1194 6433 86 4 28 chrX 79910030 79910989 -86739307 + L1_Mus2 LINE L1 5627 6562 -4 5 1194 268 82 20 0 chrX 79910989 79911038 -86739258 + RLTR21 LTR ERVK 706 755 -817 5 1194 4244 136 4 35 chrX 79911047 79911133 -86739163 + L1_Mus3 LINE L1 5158 5243 -640 5 1194 363 44 0 0 chrX 79911133 79911178 -86739118 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1194 7032 110 8 10 chrX 79911178 79912578 -86737718 + L1_Mus3 LINE L1 5244 6630 -8 5 1194 285 75 0 0 chrX 79913180 79913220 -86737076 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1194 362 230 0 0 chrX 79913283 79913359 -86736937 - B3A SINE B2 -134 82 7 5 1194 622 268 0 0 chrX 79913372 79913499 -86736797 - B1_Mur1 SINE Alu -21 128 2 5 1194 435 299 8 25 chrX 79914051 79914171 -86736125 + B4A SINE B4 175 292 0 5 1194 4196 122 10 5 chrX 79915614 79916939 -86733357 + L1Md_F2 LINE L1 237 1792 -4091 5 1194 5144 86 5 5 chrX 79916939 79917684 -86732612 + L1Md_F2 LINE L1 4840 5584 -299 5 1194 7217 93 3 2 chrX 79917686 79918679 -86731617 + L1Md_F2 LINE L1 5587 6580 -2 5 1194 287 291 97 31 chrX 79918679 79918874 -86731422 + Lx7 LINE L1 2267 2474 -3406 5 1194 2143 222 125 45 chrX 79918884 79919526 -86730770 + Lx5 LINE L1 6358 7050 0 5 1194 356 280 127 93 chrX 79919730 79919998 -86730298 + B4 SINE B4 2 278 -14 5 1194 316 182 0 0 chrX 79920625 79920680 -86729616 - B3A SINE B2 -143 55 1 5 1194 481 218 8 75 chrX 79920751 79920885 -86729411 - RSINE1 SINE B4 -39 126 2 5 1194 305 315 42 42 chrX 79920917 79921013 -86729283 - PB1D10 SINE Alu -8 109 14 5 1194 383 236 152 38 chrX 79921205 79921337 -86728959 - RSINE1 SINE B4 0 165 19 5 1194 30 69 0 0 chrX 79921360 79921418 -86728878 + AT_rich Low_complexity Low_complexity 1 58 0 5 1194 9804 234 49 39 chrX 79921491 79922713 -86727583 + Lx7 LINE L1 2459 3677 -2203 5 1194 600 40 0 0 chrX 79922713 79922788 -86727508 + (GA)n Simple_repeat Simple_repeat 2 76 0 5 1194 9804 258 62 28 chrX 79922788 79926180 -86724116 + Lx7 LINE L1 3678 7187 -509 5 1194 192 185 0 0 chrX 79926200 79926254 -86724042 + T-rich Low_complexity Low_complexity 1 54 0 5 1194 2111 278 156 29 chrX 79926297 79927519 -86722777 - Lx5 LINE L1 -3 7457 5729 5 1194 3252 189 9 22 chrX 79927519 79928288 -86722008 + L1_Mur3 LINE L1 3685 4443 -1437 5 1194 198 0 0 0 chrX 79928303 79928325 -86721971 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 5 1194 1901 275 80 17 chrX 79928357 79928934 -86721362 - Lx5 LINE L1 -74 6976 6364 5 1194 4806 212 70 49 chrX 79928989 79930432 -86719864 - Lx2B LINE L1 -5 6995 5520 5 1194 1156 203 12 0 chrX 79930436 79930677 -86719619 + L1_Mur3 LINE L1 5283 5526 -351 5 1194 7964 43 1 5 chrX 79930687 79931717 -86718579 - L1Md_F3 LINE L1 0 6584 5587 5 1194 477 355 98 31 chrX 79933529 79934038 -86716258 + L1M5 LINE L1 2322 2864 -3282 5 1194 5252 91 4 6 chrX 79934380 79935106 -86715190 + L1_Mus3 LINE L1 5912 6636 -2 5 1194 2030 43 35 0 chrX 79935159 79935417 -86714879 + L1_Mus1 LINE L1 6300 6566 -1 5 1194 2171 240 88 137 chrX 79935511 79935976 -86714320 - RMER1A Other Other -18 1012 507 5 1194 396 0 0 0 chrX 79935976 79936020 -86714276 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1194 2171 254 87 73 chrX 79936020 79937171 -86713125 - RMER1A Other Other -524 506 1 5 1194 271 311 6 24 chrX 79937925 79938093 -86712203 - L1MA10 LINE L1 0 6334 6170 5 1194 243 0 0 0 chrX 79938265 79938292 -86712004 + (TTA)n Simple_repeat Simple_repeat 2 28 0 5 1194 411 193 23 0 chrX 79938574 79938662 -86711634 + MTEa LTR MaLR 290 379 0 5 1194 1252 302 68 26 chrX 79939336 79940351 -86709945 - L1_Mur3 LINE L1 -2455 3422 2354 5 1194 978 242 31 11 chrX 79940484 79940797 -86709499 + MT2A LTR ERVL 92 459 -74 5 1194 189 0 0 0 chrX 79940797 79940818 -86709478 + (TA)n Simple_repeat Simple_repeat 2 22 0 5 1194 324 0 0 0 chrX 79940818 79940853 -86709443 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1194 550 261 56 22 chrX 79940853 79940894 -86709402 + MT2A LTR ERVL 460 502 -31 5 1194 755 153 264 28 chrX 79940896 79941078 -86709218 - URR1A DNA MER1_type 0 226 2 5 1194 2125 93 6 9 chrX 79941169 79941496 -86708800 - BGLII LTR ERVK 0 421 96 5 1194 1321 185 152 8 chrX 79941496 79941854 -86708442 - RMER3D-int LTR ERVK -1439 1403 1014 5 1194 289 0 211 0 chrX 79941880 79941951 -86708345 + CT-rich Low_complexity Low_complexity 5 90 0 5 1194 544 205 85 23 chrX 79941957 79942209 -86708087 - RMER3D-int LTR ERVK -2281 561 331 5 1194 327 120 0 0 chrX 79942226 79942276 -86708020 - ETnERV2-int LTR ERVK -6353 1053 1004 5 1194 2627 86 62 22 chrX 79942587 79942992 -86707304 - BGLII LTR ERVK 0 421 1 5 1194 341 342 7 0 chrX 79943014 79943160 -86707136 + Lx8 LINE L1 7181 7327 -146 5 1194 2507 203 36 29 chrX 79944106 79944629 -86705667 + RLTR24 LTR ERV1 3 529 0 5 1194 2101 153 142 5 chrX 79944749 79945163 -86705133 - L1VL2 LINE L1 -5664 671 201 5 1194 1000 141 46 25 chrX 79945162 79945359 -86704937 + Lx LINE L1 6424 6624 -30 5 1194 855 179 27 17 chrX 79945363 79945541 -86704755 + B1_Mus1 SINE Alu 1 183 -131 5 1194 829 152 76 0 chrX 79946058 79946229 -86704067 - L1_Mur3 LINE L1 -1870 4010 3827 5 1194 957 97 19 7 chrX 79946340 79946495 -86703801 + L1_Mus3 LINE L1 6476 6632 -6 5 1194 360 328 15 0 chrX 79946659 79946764 -86703532 + B4 SINE B4 85 194 -98 5 1194 447 145 0 0 chrX 79947739 79947815 -86702481 - Lx LINE L1 -7 6647 6572 5 1194 5316 82 21 18 chrX 79947815 79948722 -86701574 - L1_Mus4 LINE L1 -313 6323 5409 5 1194 253 323 89 101 chrX 79949033 79949212 -86701084 + MLT1A0 LTR MaLR 163 339 -26 5 1194 261 0 0 0 chrX 79949470 79949499 -86700797 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1194 23 33 0 0 chrX 79951589 79951619 -86698677 + AT_rich Low_complexity Low_complexity 1 30 0 5 1194 278 315 63 14 chrX 79951913 79952135 -86698161 + Ricksha_c DNA MuDR 13 245 -1803 5 1194 580 277 7 0 chrX 79952252 79952389 -86697907 - B1F1 SINE Alu -9 140 3 5 1194 264 222 12 12 chrX 79952398 79952483 -86697813 - L1M3 LINE L1 -1535 4605 4501 5 1194 2738 47 10 70 chrX 79952596 79952983 -86697313 - RLTR10B2 LTR ERVK 0 365 2 5 1194 263 219 68 61 chrX 79953055 79953217 -86697079 + L1M2 LINE L1 5224 5389 -911 5 1194 394 338 53 33 chrX 79953217 79953367 -86696929 + RSINE1 SINE B4 3 155 -10 5 149 1417 346 111 16 chrX 79953486 79954312 -86695984 - Lx8 LINE L1 -296 7177 6273 5 1195 4157 259 35 22 chrX 79954319 79954942 -86695354 - ORR1D1-int LTR MaLR -305 1065 434 5 1195 261 0 0 0 chrX 79954942 79954971 -86695325 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 5 1195 4157 259 35 22 chrX 79954971 79955395 -86694901 - ORR1D1-int LTR MaLR -937 433 4 5 1195 1422 253 16 8 chrX 79955395 79955762 -86694534 - ORR1D1 LTR MaLR 0 374 5 5 1195 391 247 22 0 chrX 79955939 79956028 -86694268 + ORR1D1-int LTR MaLR 309 399 -971 5 1195 322 274 87 17 chrX 79956280 79956395 -86693901 - L1MB4 LINE L1 -4 6179 6057 5 1195 3316 33 2 8 chrX 79956453 79956850 -86693446 + MTA_Mm LTR MaLR 2 396 0 5 1195 7150 91 11 73 chrX 79956850 79958021 -86692275 + MTA_Mm-int LTR MaLR 1 1098 0 5 1195 2973 46 2 55 chrX 79958021 79958375 -86691921 + MTA_Mm LTR MaLR 1 352 -44 5 1195 2913 46 0 19 chrX 79958375 79958750 -86691546 - L1Md_F2 LINE L1 -2 6580 6213 5 1195 2973 46 2 55 chrX 79958750 79958813 -86691483 + MTA_Mm LTR MaLR 353 396 0 5 1195 505 284 75 94 chrX 79958816 79959178 -86691118 - L1MB4 LINE L1 -182 5998 5644 5 1195 1215 234 47 38 chrX 79959191 79959511 -86690785 + ORR1D1 LTR MaLR 1 323 -51 5 1195 7434 165 39 14 chrX 79959672 79960492 -86689804 - Lx2B LINE L1 -5 6995 6165 5 1195 222 62 0 0 chrX 79960492 79960524 -86689772 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1195 7434 165 39 14 chrX 79960524 79961075 -86689221 - Lx2B LINE L1 -836 6164 5589 5 1195 450 263 126 19 chrX 79961118 79961213 -86689083 - L1M4 LINE L1 -757 5389 5292 5 1195 198 0 0 0 chrX 79961213 79961235 -86689061 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 1195 450 263 126 19 chrX 79961235 79961511 -86688785 - L1M4 LINE L1 -855 5291 4978 5 1195 243 0 0 0 chrX 79961698 79961725 -86688571 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1195 33 0 0 0 chrX 79962034 79962067 -86688229 + AT_rich Low_complexity Low_complexity 1 33 0 5 1195 2827 204 105 54 chrX 79963456 79963625 -86686671 + RLTR40 LTR ERVK 1 164 -653 5 1195 1197 117 6 6 chrX 79963625 79963806 -86686490 + B2_Mm2 SINE B2 1 181 -14 5 1195 2827 204 105 54 chrX 79963806 79964401 -86685895 + RLTR40 LTR ERVK 165 804 -13 5 1195 4981 121 86 7 chrX 79965735 79966575 -86683721 - RMER17A2 LTR ERVK 0 906 1 5 1195 603 327 44 48 chrX 79966584 79966812 -86683484 - MTE-int LTR MaLR -245 1335 1109 5 1195 1330 146 35 23 chrX 79966846 79967106 -86683190 - L1Md_T LINE L1 -12 6570 6308 5 1195 370 322 11 11 chrX 79967108 79967199 -86683097 - B1F1 SINE Alu -50 99 9 5 1195 1356 321 46 48 chrX 79967211 79967799 -86682497 - MTE-int LTR MaLR -993 587 1 5 1195 3136 142 102 27 chrX 79969271 79969830 -86680466 - MT2B LTR ERVL 0 601 1 5 1195 420 202 38 136 chrX 79969981 79970268 -86680028 - Lx9 LINE L1 -1 7643 7385 5 1195 5714 239 51 68 chrX 79970370 79972117 -86678179 - Lx7 LINE L1 0 7696 5980 5 1195 858 145 26 52 chrX 79972117 79972270 -86678026 - RLTR19C LTR ERVK 0 506 358 6 1195 638 174 20 74 chrX 79972263 79972412 -86677884 - ORR1A4 LTR MaLR -188 141 1 6 1195 325 307 12 12 chrX 79972421 79972586 -86677710 - Lx6 LINE L1 -1291 6169 6005 6 1195 22 56 0 0 chrX 79972643 79972679 -86677617 + AT_rich Low_complexity Low_complexity 1 36 0 6 1195 3729 120 15 27 chrX 79972827 79972943 -86677353 - Lx LINE L1 -5 6649 6532 6 1195 3336 38 2 0 chrX 79972943 79973338 -86676958 - MTA_Mm LTR MaLR 0 396 1 6 1195 3729 120 15 27 chrX 79973338 79973812 -86676484 - Lx LINE L1 -123 6531 6066 6 1195 376 152 15 0 chrX 79973812 79973878 -86676418 + L1_Mur2 LINE L1 5063 5129 -748 6 1195 3450 165 40 55 chrX 79973936 79974771 -86675525 - L1_Mur3 LINE L1 -3333 2547 1726 6 1195 327 261 474 23 chrX 79975161 79975361 -86674935 - B4 SINE B4 0 292 2 6 1195 402 322 38 65 chrX 79975739 79975925 -86674371 + MIRb SINE MIR 74 254 -14 6 1195 506 301 20 46 chrX 79976077 79976230 -86674066 + B3A SINE B2 37 185 -13 6 1195 504 0 0 0 chrX 79976369 79976425 -86673871 + (CAAAA)n Simple_repeat Simple_repeat 1 56 0 6 1195 448 309 14 0 chrX 79977869 79978008 -86672288 + B1F SINE Alu 1 141 -8 6 1195 1126 102 21 21 chrX 79978022 79978213 -86672083 + L1Md_F2 LINE L1 6380 6570 -12 6 1195 6233 191 40 13 chrX 79978274 79979561 -86670735 - Lx4A LINE L1 0 7058 5738 6 1195 373 244 39 0 chrX 79980216 79980294 -86670002 - B4A SINE B4 -23 269 189 6 1195 6031 142 41 4 chrX 79980309 79981333 -86668963 - Lx4A LINE L1 -268 6790 5729 6 1195 654 141 23 38 chrX 79981346 79981479 -86668817 + L1_Mur2 LINE L1 2034 2164 -3713 6 1195 306 172 0 0 chrX 79981477 79981535 -86668761 + L1_Mur2 LINE L1 2994 3051 -2826 6 1195 933 97 6 19 chrX 79981536 79981694 -86668602 + (GAA)n Simple_repeat Simple_repeat 3 158 0 6 1195 2331 194 125 42 chrX 79981711 79982286 -86668010 - Lx4A LINE L1 -5792 1294 672 6 1195 14326 102 6 1 chrX 79982511 79985322 -86664974 - L1_Mus1 LINE L1 0 6654 3751 6 1195 279 0 0 0 chrX 79985436 79985467 -86664829 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 1195 689 123 164 0 chrX 79985472 79985594 -86664702 - B1_Mus1 SINE Alu -5 143 2 6 1195 252 86 0 0 chrX 79985739 79985774 -86664522 + (TA)n Simple_repeat Simple_repeat 1 35 0 6 1195 24 32 0 0 chrX 79986796 79986827 -86663469 + AT_rich Low_complexity Low_complexity 1 31 0 6 1195 248 148 56 0 chrX 79986965 79987019 -86663277 - ORR1C2 LTR MaLR 0 384 328 6 1195 2559 239 49 40 chrX 79987011 79987690 -86662606 - ORR1C2-int LTR MaLR -684 686 2 6 1195 1160 226 55 26 chrX 79987700 79987973 -86662323 - ORR1C2 LTR MaLR -16 368 88 6 1195 1901 178 98 39 chrX 79987981 79988438 -86661858 - RMER6C LTR ERVK -1 689 206 6 1195 30425 102 14 13 chrX 79988470 79993815 -86656481 + L1Md_F2 LINE L1 217 5585 -298 6 1195 7308 77 4 17 chrX 79993816 79994813 -86655483 + L1Md_F2 LINE L1 5587 6570 -12 6 1195 315 62 45 30 chrX 79994853 79994920 -86655376 + (CAAA)n Simple_repeat Simple_repeat 2 69 0 6 1195 3716 147 80 21 chrX 79994920 79995621 -86654675 + MTC-int LTR MaLR 380 1121 -137 6 1195 879 153 32 26 chrX 79995637 79995791 -86654505 - RMER6C LTR ERVK -535 155 1 6 1195 376 221 0 44 chrX 79995791 79995869 -86654427 - ORR1C2 LTR MaLR -300 74 1 6 1195 1604 230 168 5 chrX 79996147 79996176 -86654120 + RCHARR1 DNA MER1_type 294 322 -652 6 1195 180 0 0 0 chrX 79996176 79996196 -86654100 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 6 1195 1604 230 168 5 chrX 79996196 79996738 -86653558 + RCHARR1 DNA MER1_type 323 957 -17 6 1195 26 0 0 0 chrX 79996762 79996788 -86653508 + AT_rich Low_complexity Low_complexity 1 26 0 6 1195 24 32 0 0 chrX 79997614 79997645 -86652651 + AT_rich Low_complexity Low_complexity 1 31 0 6 1195 530 287 84 0 chrX 79997893 79998060 -86652236 + B3A SINE B2 2 182 -16 6 1195 443 305 88 21 chrX 79998996 79999190 -86651106 + ORR1E LTR MaLR 4 210 -149 6 1195 2969 73 5 0 chrX 79999605 80000000 -86650296 - L1_Mus1 LINE L1 0 6567 6171 6 1195 939 72 0 8 chrX 80000000 80000126 -86650170 - L1_Mus1 LINE L1 -397 6170 6046 1 1195 331 256 0 100 chrX 80000126 80000226 -86650070 - PB1D10 SINE Alu -13 104 15 2 1195 23 0 0 0 chrX 80000440 80000463 -86649833 + AT_rich Low_complexity Low_complexity 1 23 0 3 1195 246 171 0 0 chrX 80001255 80001296 -86649000 - MER5A DNA MER1_type -145 44 4 4 1195 315 0 0 0 chrX 80001345 80001380 -86648916 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 5 1195 1006 105 0 0 chrX 80001380 80001523 -86648773 - B1_Mus2 SINE Alu -3 144 2 6 1195 427 350 20 20 chrX 80002189 80002335 -86647961 - RSINE1 SINE B4 -17 148 3 7 1195 204 329 0 0 chrX 80002501 80002580 -86647716 + (CATA)n Simple_repeat Simple_repeat 4 82 0 8 1195 689 226 6 0 chrX 80002958 80003135 -86647161 + CT-rich Low_complexity Low_complexity 2 179 0 9 1195 197 119 24 0 chrX 80003134 80003176 -86647120 + (TTCA)n Simple_repeat Simple_repeat 2 44 0 1 1195 2331 31 0 7 chrX 80004236 80004524 -86645772 - L1Md_F3 LINE L1 -1168 4715 4430 1 1195 7502 36 0 0 chrX 80004524 80005417 -86644879 + L1Md_F3 LINE L1 4694 5586 -297 1 1195 8136 36 5 0 chrX 80005417 80006396 -86643900 + L1Md_F3 LINE L1 5587 6570 -14 1 1195 27 0 0 0 chrX 80006671 80006698 -86643598 + AT_rich Low_complexity Low_complexity 1 27 0 1 1195 4502 240 74 35 chrX 80008340 80009087 -86641209 - Lx6 LINE L1 -10 7450 6712 1 1195 4740 121 21 127 chrX 80009087 80010101 -86640195 + RMER17A2 LTR ERVK 1 906 0 1 1195 4502 240 74 35 chrX 80010101 80010505 -86639791 - Lx6 LINE L1 -749 6711 6254 1 1195 1765 254 80 33 chrX 80010510 80011146 -86639150 - Lx6 LINE L1 -7053 675 44 1 1195 271 260 142 0 chrX 80011189 80011316 -86638980 - L1MA7 LINE L1 -3 6288 6144 1 1195 2454 239 78 83 chrX 80011525 80012354 -86637942 - Lx7 LINE L1 0 7696 6872 1 1195 372 183 0 27 chrX 80012354 80012421 -86637875 - RMER6C LTR ERVK 0 690 626 1 1195 1651 116 110 75 chrX 80012421 80012739 -86637557 - ORR1A4 LTR MaLR 0 329 1 1 1195 2072 174 163 70 chrX 80012769 80013333 -86636963 - RMER6C LTR ERVK -74 616 1 1 1195 2891 251 20 35 chrX 80013333 80014097 -86636199 - Lx7 LINE L1 -819 6877 6126 1 1195 1795 250 66 13 chrX 80014094 80014625 -86635671 + Lx7 LINE L1 5610 6168 -1528 1 1195 243 247 68 0 chrX 80014628 80014701 -86635595 - L1MA7 LINE L1 -360 5952 5875 1 1195 28 0 0 0 chrX 80014701 80014729 -86635567 + AT_rich Low_complexity Low_complexity 1 28 0 1 1195 762 327 33 34 chrX 80014791 80015087 -86635209 - MT2A LTR ERVL -26 575 190 2 1195 27 81 0 0 chrX 80015576 80015638 -86634658 + AT_rich Low_complexity Low_complexity 1 62 0 2 1195 360 0 0 0 chrX 80015978 80016018 -86634278 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1195 360 0 0 0 chrX 80016698 80016738 -86633558 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 2 1195 2618 109 62 2 chrX 80016747 80017170 -86633126 - Lx3B LINE L1 -7 6966 6519 2 1195 285 71 0 4 chrX 80017779 80017838 -86632458 - L1_Mus2 LINE L1 0 6582 6522 2 1195 6860 96 11 1 chrX 80017893 80018857 -86631439 - L1_Mus3 LINE L1 0 6638 5665 2 1195 1463 101 0 0 chrX 80018853 80019060 -86631236 + L1_Mus1 LINE L1 5866 6072 -495 2 1195 7413 88 39 7 chrX 80019056 80020587 -86629709 - L1VL1 LINE L1 -2104 1594 3 2 1195 876 189 16 21 chrX 80020622 80020811 -86629485 + B2_Mm2 SINE B2 1 188 -7 2 1195 306 148 0 0 chrX 80020814 80020868 -86629428 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 1195 525 156 0 0 chrX 80023035 80023131 -86627165 + (TA)n Simple_repeat Simple_repeat 2 97 0 3 1195 633 203 21 14 chrX 80023142 80023287 -86627009 - B1_Mur4 SINE Alu 0 150 5 3 1195 220 293 0 33 chrX 80023355 80023370 -86626926 - ID_B1 SINE B4 -69 155 99 3 1195 246 227 0 0 chrX 80023370 80023414 -86626882 - B1F SINE Alu -88 61 18 3 1195 508 259 49 21 chrX 80023517 80023659 -86626637 + B1_Mus2 SINE Alu 1 146 -1 3 1195 213 200 0 0 chrX 80023659 80023699 -86626597 + A-rich Low_complexity Low_complexity 1 40 0 3 1195 28 29 0 0 chrX 80023778 80023813 -86626483 + AT_rich Low_complexity Low_complexity 1 35 0 3 1195 3441 23 2 0 chrX 80023818 80024213 -86626083 - MTA_Mm LTR MaLR 0 396 1 3 1195 9469 19 0 5 chrX 80024213 80025316 -86624980 - MTA_Mm-int LTR MaLR 0 1098 1 3 1195 3355 28 5 0 chrX 80025316 80025710 -86624586 - MTA_Mm LTR MaLR 0 396 1 3 1195 310 315 78 84 chrX 80025716 80025977 -86624319 + L1MA4 LINE L1 5547 5806 -494 3 1195 757 104 0 0 chrX 80025977 80026092 -86624204 - L1_Mus1 LINE L1 -5 6562 6448 4 1195 310 315 78 84 chrX 80026092 80026201 -86624095 + L1MA4 LINE L1 5807 5915 -385 3 1195 4802 133 11 58 chrX 80026526 80027421 -86622875 + MusHAL1 LINE L1 1020 1872 -840 4 1195 90 0 0 0 chrX 80027917 80028007 -86622289 + AT_rich Low_complexity Low_complexity 1 90 0 4 1195 34286 87 5 8 chrX 80028024 80033625 -86616671 - L1Md_F2 LINE L1 -556 6026 446 4 1195 2564 171 89 67 chrX 80034073 80034529 -86615767 + RMER6C LTR ERVK 1 471 -219 4 1195 207 0 0 0 chrX 80034529 80034552 -86615744 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 1195 2564 171 89 67 chrX 80034552 80034770 -86615526 + RMER6C LTR ERVK 472 689 -1 4 1195 2097 201 50 68 chrX 80035128 80035220 -86615076 - RLTR20C LTR ERVK 0 534 452 4 1195 333 0 0 0 chrX 80035220 80035257 -86615039 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1195 2097 201 50 68 chrX 80035257 80035708 -86614588 - RLTR20C LTR ERVK -83 451 1 4 1195 324 0 0 0 chrX 80036203 80036239 -86614057 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 4 1195 1078 64 0 41 chrX 80036241 80036387 -86613909 - B1_Mm SINE Alu -6 141 2 4 1195 279 0 0 0 chrX 80036410 80036441 -86613855 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1195 2391 80 9 20 chrX 80036664 80037010 -86613286 + L1_Mus3 LINE L1 6291 6632 -6 5 1195 8171 37 0 0 chrX 80037215 80038187 -86612109 - L1Md_T LINE L1 0 6582 5611 5 1195 7822 17 1 0 chrX 80038185 80039085 -86611211 + L1Md_T LINE L1 4702 5602 -281 5 1195 1985 43 4 8 chrX 80040749 80041007 -86609289 - L1_Mus4 LINE L1 -604 6032 5776 5 1195 744 105 8 8 chrX 80041007 80041141 -86609155 + L1_Mus4 LINE L1 6493 6626 -10 5 1195 233 312 26 0 chrX 80041155 80041232 -86609064 + ID4 SINE ID 4 82 -1 5 1195 240 250 33 0 chrX 80041173 80041233 -86609063 + ID SINE ID 23 84 -140 5 1195 26 30 0 0 chrX 80041310 80041343 -86608953 + AT_rich Low_complexity Low_complexity 1 33 0 5 1195 299 338 21 14 chrX 80041834 80041978 -86608318 - MIR SINE MIR -2 260 116 5 1195 186 43 0 0 chrX 80043946 80043969 -86606327 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 5 1195 1953 136 0 0 chrX 80044740 80045034 -86605262 - Lx LINE L1 -413 6241 5948 6 1195 7077 171 15 4 chrX 80045040 80046370 -86603926 - L1_Mur2 LINE L1 -592 5285 3941 6 1195 4663 112 25 5 chrX 80046369 80047693 -86602603 - L1VL2 LINE L1 -1979 1636 282 6 1195 1167 62 7 0 chrX 80047831 80047977 -86602319 + B1_Mm SINE Alu 1 147 0 6 1195 535 279 43 7 chrX 80048012 80048153 -86602143 + B1_Mur1 SINE Alu 1 146 -3 6 1195 8820 121 37 4 chrX 80048402 80049934 -86600362 + Lx2 LINE L1 5410 6991 -6 6 1195 22 35 0 0 chrX 80050156 80050185 -86600111 + AT_rich Low_complexity Low_complexity 1 29 0 6 1195 392 289 112 6 chrX 80050244 80050609 -86599687 + L1MD2 LINE L1 2227 2630 -3516 6 1195 1044 286 69 31 chrX 80050632 80051241 -86599055 + L1MD2 LINE L1 5374 6005 -354 6 1195 566 279 95 33 chrX 80051433 80051644 -86598652 + B4 SINE B4 63 286 -6 6 1195 306 0 0 0 chrX 80051658 80051692 -86598604 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1195 401 299 121 23 chrX 80051895 80052467 -86597829 - L1MD LINE L1 -2453 3693 3066 7 1195 787 248 91 0 chrX 80052783 80052981 -86597315 - B3 SINE B2 0 216 1 7 1195 965 103 87 44 chrX 80053009 80053192 -86597104 - B2_Mm2 SINE B2 -3 192 2 7 1195 589 25 12 12 chrX 80054014 80054094 -86596202 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 7 1195 220 373 83 61 chrX 80054096 80054276 -86596020 - L2a LINE L2 -37 3389 3206 7 1195 1285 228 44 13 chrX 80054315 80054702 -86595594 - Lx9 LINE L1 -1 7643 7245 7 1195 969 187 34 5 chrX 80054702 80054906 -86595390 + Lx9 LINE L1 6977 7186 -458 7 1195 416 196 179 2 chrX 80055136 80055276 -86595020 + B3 SINE B2 8 181 -14 7 1195 333 0 0 0 chrX 80055409 80055446 -86594850 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1195 655 231 18 12 chrX 80055544 80055715 -86594581 - L1_Rod LINE L1 -38 5809 5638 7 1195 413 309 93 55 chrX 80055728 80056330 -86593966 + L1MA9 LINE L1 4276 4900 -1240 7 1195 3222 213 78 5 chrX 80056329 80056980 -86593316 + RMER1B Other Other 367 1065 -1 8 1195 398 233 46 8 chrX 80056974 80057123 -86593173 + L1MA9 LINE L1 4884 5041 -1102 7 1195 696 266 103 128 chrX 80057225 80058383 -86591913 + L1MA9 LINE L1 5050 6198 -114 7 1195 277 144 53 40 chrX 80058966 80059118 -86591178 + (TA)n Simple_repeat Simple_repeat 1 154 0 8 1195 522 46 0 0 chrX 80063306 80063371 -86586925 + (GA)n Simple_repeat Simple_repeat 2 66 0 8 1195 307 156 0 0 chrX 80064213 80064277 -86586019 + Lx4A LINE L1 6995 7058 0 8 1195 434 344 8 0 chrX 80064360 80064488 -86585808 + B1F SINE Alu 21 149 0 8 1195 180 0 0 0 chrX 80064563 80064583 -86585713 + (T)n Simple_repeat Simple_repeat 1 20 0 8 1195 252 161 0 82 chrX 80064648 80064709 -86585587 + A-rich Low_complexity Low_complexity 2 57 0 8 1195 446 261 70 106 chrX 80064821 80064972 -86585324 + B3 SINE B2 56 208 -8 8 1195 1496 257 57 41 chrX 80065214 80065652 -86584644 - Lx5 LINE L1 0 7050 6606 8 1195 477 285 40 27 chrX 80065653 80065801 -86584495 + MER58A DNA MER1_type 70 219 -5 8 1195 213 366 24 12 chrX 80067389 80067472 -86582824 + ID SINE ID 1 84 -140 9 1195 246 271 120 40 chrX 80069075 80069175 -86581121 - L2c LINE L2 -1 3386 3279 9 1195 24 32 0 0 chrX 80070350 80070381 -86579915 + AT_rich Low_complexity Low_complexity 1 31 0 9 1195 332 335 94 77 chrX 80070589 80071099 -86579197 - L1ME3B LINE L1 -405 5835 5317 9 1195 590 88 20 0 chrX 80071106 80071208 -86579088 + (CAGAGA)n Simple_repeat Simple_repeat 5 108 0 9 1195 423 336 93 28 chrX 80071238 80071452 -86578844 - B4 SINE B4 -63 229 2 9 1195 525 310 0 0 chrX 80071946 80072091 -86578205 - B1_Mur1 SINE Alu -3 146 2 9 1195 184 237 82 33 chrX 80072290 80072351 -86577945 - MIRb SINE MIR -10 258 195 9 1195 252 167 0 23 chrX 80072526 80072569 -86577727 - tRNA-Met_ tRNA tRNA -34 42 1 9 1195 372 286 21 102 chrX 80073434 80073621 -86576675 - Lx8 LINE L1 -238 7235 7064 9 1195 240 35 0 0 chrX 80073654 80073683 -86576613 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1195 277 381 35 18 chrX 80075127 80075298 -86574998 + LTR16E2 LTR ERVL 383 556 -12 1 1195 2022 69 0 4 chrX 80075454 80075716 -86574580 + L1_Mus1 LINE L1 5982 6242 -325 1 1195 249 93 70 0 chrX 80075716 80075759 -86574537 + B1_Mm SINE Alu 102 147 0 1 1195 31 44 0 0 chrX 80075916 80075961 -86574335 + AT_rich Low_complexity Low_complexity 1 45 0 1 1195 22 0 0 0 chrX 80076227 80076249 -86574047 + AT_rich Low_complexity Low_complexity 1 22 0 1 1195 598 259 47 56 chrX 80076339 80076552 -86573744 - B3 SINE B2 -5 211 1 1 1195 501 87 65 0 chrX 80076561 80076653 -86573643 - L1Md_F3 LINE L1 -1 6583 6486 1 1195 457 283 0 48 chrX 80076780 80076795 -86573501 + ID_B1 SINE B4 78 215 -9 1 1195 806 192 0 0 chrX 80076795 80076925 -86573371 + B1_Mus2 SINE Alu 9 138 -9 1 1195 661 306 42 39 chrX 80076923 80077256 -86573040 - MLT1A0 LTR MaLR -28 337 4 1 1195 21 0 0 0 chrX 80077421 80077442 -86572854 + AT_rich Low_complexity Low_complexity 1 21 0 1 1195 6588 117 65 0 chrX 80077467 80078489 -86571807 - Lx2 LINE L1 0 6997 5910 1 1195 5316 134 74 16 chrX 80078661 80079566 -86570730 - RMER17B LTR ERVK 0 958 1 1 1195 318 263 25 17 chrX 80080309 80080429 -86569867 + L1MD LINE L1 4906 5026 -1120 1 1195 396 0 0 0 chrX 80080447 80080491 -86569805 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1195 471 294 6 58 chrX 80080816 80080989 -86569307 + RSINE1 SINE B4 2 165 0 1 1195 23 0 0 0 chrX 80080991 80081014 -86569282 + AT_rich Low_complexity Low_complexity 1 23 0 1 149 33728 80 4 7 chrX 80081027 80086164 -86564132 + L1Md_A LINE L1 220 5752 -131 1 1196 461 326 104 52 chrX 80086342 80086630 -86563666 + MLT1D LTR MaLR 201 503 -2 1 1196 377 310 0 25 chrX 80086644 80086763 -86563533 - Tigger5 DNA MER2_type 0 2406 2291 1 1196 22 35 0 0 chrX 80086789 80086818 -86563478 + AT_rich Low_complexity Low_complexity 1 29 0 1 1196 513 273 73 24 chrX 80086937 80087185 -86563111 - Lx9 LINE L1 -52 7592 7333 1 1196 947 302 33 50 chrX 80088219 80088522 -86561774 + Tigger7 DNA MER2_type 5 302 -2189 1 1196 433 276 230 30 chrX 80088539 80088804 -86561492 + Tigger7 DNA MER2_type 2161 2478 -13 1 1196 861 109 62 48 chrX 80089345 80089476 -86560820 + B1_Mus1 SINE Alu 2 137 -11 1 1196 208 0 62 0 chrX 80089476 80089508 -86560788 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1196 861 109 62 48 chrX 80089508 80089521 -86560775 + B1_Mus1 SINE Alu 138 148 0 1 1196 310 314 88 20 chrX 80090166 80090462 -86559834 + L1MA4 LINE L1 5302 5617 -686 1 1196 7265 107 21 12 chrX 80090495 80092355 -86557941 - L1_Mus3 LINE L1 -2 6636 4757 1 1196 4573 155 44 50 chrX 80092368 80093321 -86556975 + RMER17B LTR ERVK 2 948 -10 1 1196 5668 130 4 8 chrX 80093324 80094238 -86556058 - L1_Mus3 LINE L1 -1125 4758 3848 1 1196 4161 171 25 26 chrX 80094228 80095001 -86555295 - L1VL2 LINE L1 -5468 867 96 1 1196 561 250 42 40 chrX 80095038 80095280 -86555016 + L1MA4 LINE L1 5726 5965 -347 1 1196 636 264 34 6 chrX 80095757 80095900 -86554396 + B3A SINE B2 7 154 -44 1 1196 693 0 0 0 chrX 80095900 80095977 -86554319 + (TTC)n Simple_repeat Simple_repeat 3 79 0 1 1196 636 264 34 6 chrX 80095977 80096008 -86554288 + B3A SINE B2 155 186 -12 1 1196 33 0 0 42 chrX 80096008 80096040 -86554256 + AT_rich Low_complexity Low_complexity 1 31 0 1 1196 1879 43 0 0 chrX 80096040 80096271 -86554025 + L1Md_T LINE L1 6352 6582 0 1 1196 33 0 0 42 chrX 80096271 80096286 -86554010 + AT_rich Low_complexity Low_complexity 1 15 0 1 1196 356 344 12 24 chrX 80096304 80096471 -86553825 - MER82 DNA MER2_type -152 501 337 1 1196 1009 222 42 61 chrX 80096485 80096749 -86553547 - Lx5 LINE L1 -1 7049 6791 1 1196 257 292 0 40 chrX 80097579 80097679 -86552617 + (TATATG)n Simple_repeat Simple_repeat 3 98 0 1 1196 513 80 0 0 chrX 80097695 80097770 -86552526 + (TA)n Simple_repeat Simple_repeat 2 76 0 1 1196 345 368 14 29 chrX 80098905 80099045 -86551251 - RSINE1 SINE B4 -18 147 10 1 1196 678 230 22 0 chrX 80099364 80099503 -86550793 + B1_Mur4 SINE Alu 1 142 -8 1 1196 420 20 0 0 chrX 80099507 80099556 -86550740 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1196 213 235 0 0 chrX 80100649 80100700 -86549596 + (TTTA)n Simple_repeat Simple_repeat 4 54 0 1 1196 382 288 98 0 chrX 80103107 80103239 -86547057 + ID_B1 SINE B4 79 223 -1 1 1196 662 304 102 37 chrX 80103597 80104079 -86546217 + L1MC1 LINE L1 5650 6162 -171 1 1196 1024 339 49 5 chrX 80104827 80105216 -86545080 + MLT1A1 LTR MaLR 3 408 0 1 1196 297 256 11 55 chrX 80105957 80106048 -86544248 - MLT1A0 LTR MaLR -24 443 357 1 1196 344 346 61 11 chrX 80106076 80106257 -86544039 - MLT1A0 LTR MaLR -175 190 1 1 1196 882 26 0 0 chrX 80106954 80107069 -86543227 + L1Md_A LINE L1 6468 6582 0 1 1196 213 305 0 0 chrX 80107089 80107148 -86543148 + ID_B1 SINE B4 99 157 -67 1 1196 22 0 0 0 chrX 80107161 80107183 -86543113 + AT_rich Low_complexity Low_complexity 1 22 0 1 1196 267 250 0 0 chrX 80107355 80107423 -86542873 - L1_Mur3 LINE L1 -7474 238 171 1 1196 2542 172 16 7 chrX 80107421 80107915 -86542381 + L1_Mur3 LINE L1 5031 5559 -732 1 1196 419 0 20 0 chrX 80108815 80108866 -86541430 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 1196 465 286 78 0 chrX 80109477 80109631 -86540665 - Lx5 LINE L1 -3 7047 6882 1 1196 997 75 0 0 chrX 80110284 80110417 -86539879 + B1_Mus2 SINE Alu 14 146 -1 1 1196 207 0 0 0 chrX 80110417 80110440 -86539856 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 1196 276 406 43 43 chrX 80110468 80110746 -86539550 + MLT1J LTR MaLR 31 308 -204 1 1196 487 285 89 0 chrX 80110832 80110990 -86539306 + MTD LTR MaLR 18 189 -230 1 1196 1259 215 79 63 chrX 80111594 80112025 -86538271 + RMER10A LTR ERVL 1 438 -4 1 1196 1316 139 50 96 chrX 80112825 80113168 -86537128 - RMER17C LTR ERVK 0 410 84 1 1196 729 63 0 0 chrX 80113706 80113801 -86536495 + (GAAA)n Simple_repeat Simple_repeat 3 97 0 1 1196 307 336 143 38 chrX 80113851 80113984 -86536312 - PB1D10 SINE Alu -2 147 1 1 1196 664 296 45 45 chrX 80115852 80116016 -86534280 + B3A SINE B2 1 172 -26 1 1196 285 89 0 0 chrX 80116016 80116061 -86534235 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1196 664 296 45 45 chrX 80116061 80116094 -86534202 + B3A SINE B2 173 198 0 1 1196 22 35 0 0 chrX 80116257 80116286 -86534010 + AT_rich Low_complexity Low_complexity 1 29 0 1 1196 893 228 4 65 chrX 80116923 80117153 -86533143 + B3 SINE B2 1 216 0 1 1196 23 0 0 0 chrX 80117231 80117254 -86533042 + AT_rich Low_complexity Low_complexity 1 23 0 1 1196 351 0 0 0 chrX 80118247 80118286 -86532010 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1196 225 327 57 40 chrX 80118438 80118613 -86531683 - LTR86A1 LTR ERVL -237 276 99 1 1196 313 354 0 0 chrX 80119207 80119303 -86530993 + PB1 SINE Alu 32 127 0 1 1196 223 292 0 40 chrX 80119303 80119378 -86530918 + GA-rich Low_complexity Low_complexity 3 74 0 1 1196 333 0 0 0 chrX 80119394 80119431 -86530865 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1196 222 294 43 29 chrX 80119440 80119510 -86530786 + ID4 SINE ID 3 73 -10 1 1196 297 0 0 0 chrX 80120184 80120217 -86530079 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1196 898 223 118 67 chrX 80120650 80121039 -86529257 - Lx7 LINE L1 -8 7688 7280 1 1196 189 0 0 0 chrX 80121334 80121355 -86528941 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1196 265 250 0 48 chrX 80121367 80121430 -86528866 + 4.5SRNA scRNA scRNA 29 88 -6 1 1196 452 191 106 0 chrX 80121377 80121471 -86528825 + B1F2 SINE Alu 41 144 -5 1 1196 476 335 37 46 chrX 80121928 80122253 -86528043 + L1MDb LINE L1 25 346 -6063 1 1196 349 313 461 6 chrX 80122468 80122648 -86527648 + RCHARR1 DNA MER1_type 4 265 -709 1 1196 1884 58 21 0 chrX 80123538 80123781 -86526515 + L1Md_A LINE L1 6335 6582 0 1 1196 22 0 0 0 chrX 80124616 80124638 -86525658 + AT_rich Low_complexity Low_complexity 1 22 0 1 1196 270 157 18 73 chrX 80124711 80124766 -86525530 + MurSatRep1 Unknown Unknown 229 280 -1857 1 1196 21 0 0 0 chrX 80124934 80124955 -86525341 + AT_rich Low_complexity Low_complexity 1 21 0 1 1196 10794 110 26 5 chrX 80125352 80127824 -86522472 + L1_Mus3 LINE L1 4102 6632 -6 1 1196 21 0 0 0 chrX 80128071 80128092 -86522204 + AT_rich Low_complexity Low_complexity 1 21 0 1 1196 268 330 29 0 chrX 80129227 80129330 -86520966 - Tigger12A DNA MER2_type -38 753 648 1 1196 198 0 0 0 chrX 80129330 80129352 -86520944 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1196 340 94 0 6 chrX 80129352 80129414 -86520882 - B1_Mm SINE Alu 0 147 89 1 1196 418 267 12 0 chrX 80129993 80130079 -86520217 + PB1D9 SINE Alu 6 92 -28 1 1196 462 96 0 0 chrX 80130106 80130179 -86520117 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 1196 314 267 0 95 chrX 80130193 80130242 -86520054 - B4 SINE B4 -15 277 229 1 1196 3384 35 0 2 chrX 80130242 80130639 -86519657 - MTA_Mm LTR MaLR 0 396 1 1 1196 314 267 0 95 chrX 80130639 80130684 -86519612 - B4 SINE B4 -64 228 192 1 1196 900 194 136 0 chrX 80130692 80130883 -86519413 - URR1A DNA MER1_type -6 220 4 1 1196 325 358 37 0 chrX 80130912 80131021 -86519275 - B4A SINE B4 -82 210 98 1 1196 254 140 0 34 chrX 80131025 80131084 -86519212 + (TTATA)n Simple_repeat Simple_repeat 4 60 0 1 1196 248 185 101 58 chrX 80131098 80131167 -86519129 - B4 SINE B4 -220 72 1 1 1196 325 211 0 13 chrX 80131452 80131529 -86518767 - L1M1 LINE L1 -675 5628 5553 1 1196 261 270 5 27 chrX 80131535 80131628 -86518668 + Lx7 LINE L1 5630 5741 -1955 1 1196 7004 92 30 11 chrX 80131628 80132632 -86517664 + RLTR13D5 LTR ERVK 1 1023 0 1 1196 260 276 32 105 chrX 80132632 80132757 -86517539 + Lx7 LINE L1 5723 5832 -15 1 1196 228 219 15 15 chrX 80132783 80132848 -86517448 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 1196 7099 186 42 10 chrX 80133186 80134939 -86515357 - Lx5 LINE L1 0 7050 5227 2 1196 4863 47 7 5 chrX 80134939 80135555 -86514741 - L1Md_F2 LINE L1 -2 6580 5964 2 1196 7099 151 36 10 chrX 80135555 80136195 -86514101 - Lx5 LINE L1 -651 5226 4566 2 1196 25 31 0 0 chrX 80136200 80136232 -86514064 + AT_rich Low_complexity Low_complexity 1 32 0 2 1196 21 36 0 0 chrX 80136473 80136501 -86513795 + AT_rich Low_complexity Low_complexity 1 28 0 2 1196 196 28 83 0 chrX 80137355 80137391 -86512905 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2 1196 603 146 0 60 chrX 80137399 80137419 -86512877 + ETnERV2-int LTR ERVK 1888 1906 -5500 2 1196 360 0 0 0 chrX 80137419 80137459 -86512837 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 1196 603 146 0 60 chrX 80137459 80137555 -86512741 + ETnERV2-int LTR ERVK 1907 1997 -5409 2 1196 2568 41 9 0 chrX 80137563 80137880 -86512416 - L1Md_F3 LINE L1 -2 6582 6263 2 1196 788 10 83 0 chrX 80137880 80137976 -86512320 + L1Md_F3 LINE L1 6150 6253 -329 2 1196 2815 152 11 114 chrX 80137978 80138609 -86511687 + ETnERV2-int LTR ERVK 1987 2552 -4854 2 1196 748 214 11 23 chrX 80138636 80138813 -86511483 + Lx6 LINE L1 7276 7450 -10 2 1196 24 53 0 0 chrX 80139019 80139057 -86511239 + AT_rich Low_complexity Low_complexity 1 38 0 2 1196 28 61 0 0 chrX 80139284 80139333 -86510963 + AT_rich Low_complexity Low_complexity 1 49 0 2 1196 22 0 0 0 chrX 80139575 80139597 -86510699 + AT_rich Low_complexity Low_complexity 1 22 0 2 1196 389 364 51 0 chrX 80139864 80139982 -86510314 + ID_B1 SINE B4 2 125 -99 2 1196 540 45 0 0 chrX 80140311 80140378 -86509918 + (GAA)n Simple_repeat Simple_repeat 1 67 0 2 1196 270 116 0 0 chrX 80140380 80140423 -86509873 + (GGAA)n Simple_repeat Simple_repeat 4 46 0 2 1196 1107 95 0 0 chrX 80140507 80140654 -86509642 + B1_Mm SINE Alu 1 147 0 2 1196 189 0 0 0 chrX 80140654 80140675 -86509621 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1196 3798 148 61 55 chrX 80140675 80141049 -86509247 - ETnERV2-int LTR ERVK -5547 1859 1476 2 1196 240 59 0 0 chrX 80141049 80141083 -86509213 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2 1196 3798 148 61 55 chrX 80141083 80141516 -86508780 - ETnERV2-int LTR ERVK -5931 1475 1048 2 1196 29 28 0 0 chrX 80141530 80141566 -86508730 + AT_rich Low_complexity Low_complexity 1 36 0 2 1196 259 266 84 93 chrX 80141566 80141889 -86508407 - ETnERV2-int LTR ERVK -2991 323 4 2 1196 2353 110 25 56 chrX 80141891 80142286 -86508010 - RLTR9A2 LTR ERVK 0 383 1 2 1196 1232 252 47 0 chrX 80142293 80142551 -86507745 - Lx6 LINE L1 -202 7258 6989 2 1196 396 0 0 0 chrX 80142568 80142612 -86507684 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 1196 582 170 0 18 chrX 80142724 80142838 -86507458 - 7SK RNA RNA -216 115 4 2 1196 2321 257 38 5 chrX 80142838 80143440 -86506856 + Lx5 LINE L1 5740 6361 -689 2 1196 3526 154 163 11 chrX 80143441 80144188 -86506108 + MTB-int LTR MaLR 383 1243 -15 2 1196 2649 67 66 11 chrX 80144188 80144567 -86505729 + MTB LTR MaLR 1 400 0 2 1196 714 221 99 33 chrX 80144571 80144782 -86505514 - RLTR18-int LTR ERVK -1978 3383 3159 2 1196 2727 184 16 26 chrX 80145001 80145570 -86504726 - L1_Mur3 LINE L1 -1734 4146 3584 2 1196 3135 116 17 4 chrX 80145590 80146067 -86504229 - RLTR1C LTR ERV1 -20 483 1 2 1196 678 238 50 27 chrX 80146074 80146294 -86504002 - L1_Mur3 LINE L1 -3096 2784 2560 2 1196 2692 163 16 12 chrX 80146290 80146970 -86503326 - L1_Mur3 LINE L1 -4153 1727 1039 2 1196 273 179 24 71 chrX 80146972 80147056 -86503240 - RLTR41 LTR ERV1 -2 444 365 2 1196 324 231 57 95 chrX 80147040 80147145 -86503151 - RLTR41 LTR ERV1 -283 163 63 2 1196 443 224 35 0 chrX 80147149 80147265 -86503031 - L1_Mur3 LINE L1 -6687 1041 922 2 1196 4965 73 9 4 chrX 80147266 80147944 -86502352 - L1_Mus3 LINE L1 -2 6636 5956 2 1196 5342 107 3 14 chrX 80147944 80148913 -86501383 + L1_Mus3 LINE L1 5042 5994 -644 2 1196 285 194 45 0 chrX 80148898 80148965 -86501331 - L1_Mur3 LINE L1 -6800 928 859 2 1196 826 302 113 35 chrX 80148993 80149559 -86500737 - L1_Mur3 LINE L1 -7047 681 95 2 1196 521 233 60 8 chrX 80149893 80150027 -86500269 + B1_Mur2 SINE Alu 1 141 -8 2 1196 311 321 122 28 chrX 80151408 80151661 -86498635 - B4 SINE B4 -12 280 4 2 1196 3026 54 10 10 chrX 80152282 80152677 -86497619 + L1Md_F2 LINE L1 5192 5586 -297 2 1196 7459 70 0 8 chrX 80152677 80153669 -86496627 + L1Md_F2 LINE L1 5587 6570 -12 2 1196 270 275 14 0 chrX 80155008 80155077 -86495219 + ID_B1 SINE B4 146 215 -9 2 1196 251 265 0 0 chrX 80155079 80155128 -86495168 - B1F1 SINE Alu -100 49 1 2 1196 183 80 0 0 chrX 80155532 80155557 -86494739 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 1196 378 0 0 0 chrX 80155558 80155600 -86494696 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1196 396 324 29 0 chrX 80155640 80155742 -86494554 + RSINE1 SINE B4 51 155 -10 2 1196 21 36 0 0 chrX 80155803 80155831 -86494465 + AT_rich Low_complexity Low_complexity 1 28 0 2 1196 22 35 0 0 chrX 80156013 80156042 -86494254 + AT_rich Low_complexity Low_complexity 1 29 0 2 1196 21 0 0 0 chrX 80156337 80156358 -86493938 + AT_rich Low_complexity Low_complexity 1 21 0 2 1196 648 212 57 14 chrX 80156358 80156568 -86493728 - Lx9 LINE L1 -1 7643 7425 2 1196 6189 88 9 0 chrX 80157062 80157921 -86492375 - L1_Mus3 LINE L1 -2 6636 5770 2 1196 5124 130 28 23 chrX 80158465 80159330 -86490966 - Lx3C LINE L1 -140 6836 5968 2 1196 22 0 0 0 chrX 80159340 80159362 -86490934 + AT_rich Low_complexity Low_complexity 1 22 0 2 1196 371 304 36 7 chrX 80159741 80159880 -86490416 - MER5A1 DNA MER1_type 0 166 24 2 1196 402 129 0 34 chrX 80160071 80160159 -86490137 + L1Md_F2 LINE L1 6497 6581 -1 2 1196 3190 127 62 0 chrX 80162609 80163113 -86487183 + L1_Mur1 LINE L1 5334 5868 -18 2 1196 371 278 13 89 chrX 80163404 80163562 -86486734 + L1MD LINE L1 5548 5693 -549 2 1196 249 250 18 0 chrX 80163674 80163730 -86486566 + ID4_ SINE ID 4 60 -23 2 1196 198 0 0 0 chrX 80164022 80164044 -86486252 + (TA)n Simple_repeat Simple_repeat 1 22 0 2 1196 2672 111 21 25 chrX 80164565 80164999 -86485297 + Lx2 LINE L1 6566 6997 0 2 1196 1060 286 122 43 chrX 80165170 80165892 -86484404 - L1MD1 LINE L1 -192 6050 5272 2 1196 210 150 0 0 chrX 80166079 80166119 -86484177 + (CAT)n Simple_repeat Simple_repeat 2 41 0 2 1196 2037 279 91 16 chrX 80166119 80166815 -86483481 - Lx8 LINE L1 -139 7334 6587 2 1196 322 288 75 17 chrX 80166873 80167046 -86483250 - L1MD1 LINE L1 -920 5226 5044 2 1196 1486 58 0 0 chrX 80167197 80167385 -86482911 + L1_Mus1 LINE L1 6380 6567 0 2 1196 303 283 184 27 chrX 80167445 80167739 -86482557 - L1MD1 LINE L1 -1279 4867 4528 2 1196 27 92 0 0 chrX 80167925 80168001 -86482295 + AT_rich Low_complexity Low_complexity 1 76 0 2 1196 1174 208 172 132 chrX 80168534 80169226 -86481070 + RMER6D LTR ERVK 1 720 0 2 1196 898 207 55 17 chrX 80169692 80169949 -86480347 + L1MCa LINE L1 1546 1844 -4573 2 1196 1192 54 0 0 chrX 80169998 80170145 -86480151 + B1_Mus2 SINE Alu 1 147 0 2 1196 1626 92 0 0 chrX 80170409 80170627 -86479669 - L1_Mus1 LINE L1 0 6567 6350 2 1196 1237 57 0 0 chrX 80170903 80171061 -86479235 + L1_Mus1 LINE L1 6409 6566 -1 2 1196 1002 309 67 28 chrX 80172028 80172361 -86477935 - L1MC1 LINE L1 -302 6031 5675 2 1196 910 116 139 6 chrX 80172361 80172526 -86477770 - B2_Mm2 SINE B2 -8 187 1 2 1196 1002 309 67 28 chrX 80172526 80172791 -86477505 - L1MC1 LINE L1 -659 5674 5410 2 1196 404 252 61 53 chrX 80172939 80173093 -86477203 + MTD LTR MaLR 267 421 0 2 1196 2326 251 131 77 chrX 80173093 80174283 -86476013 + MTD-int LTR MaLR 1 1254 -4 2 1196 897 243 79 45 chrX 80174288 80174632 -86475664 + MTD LTR MaLR 1 405 -14 2 1196 325 286 0 0 chrX 80174659 80174778 -86475518 - L1MC1 LINE L1 -844 5302 5184 2 1196 2502 300 91 38 chrX 80174782 80174891 -86475405 - Lx8 LINE L1 -431 7042 6916 2 1196 180 0 0 0 chrX 80174891 80174911 -86475385 + (CACTT)n Simple_repeat Simple_repeat 1 20 0 2 1196 2502 300 91 38 chrX 80174911 80176025 -86474271 - Lx8 LINE L1 -558 6915 5756 2 1196 247 236 43 43 chrX 80176058 80176151 -86474145 - L1MD LINE L1 -2521 3625 3533 2 1196 10339 154 22 24 chrX 80176156 80177025 -86473271 + L1_Mur2 LINE L1 3958 4848 -1029 2 1196 1158 122 0 0 chrX 80177025 80177205 -86473091 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 1196 10339 154 22 24 chrX 80177205 80177220 -86473076 + L1_Mur2 LINE L1 4849 4853 -1024 2 1196 546 16 0 0 chrX 80177220 80177283 -86473013 + (GGGA)n Simple_repeat Simple_repeat 2 64 0 2 1196 10339 154 22 24 chrX 80177283 80178314 -86471982 + L1_Mur2 LINE L1 4854 5870 -7 2 1196 2962 177 98 2 chrX 80178312 80178884 -86471412 + Lx2B LINE L1 6372 6998 -2 2 1196 389 286 95 10 chrX 80178887 80179220 -86471076 - L1MD LINE L1 -2618 3528 3157 2 1196 381 258 128 64 chrX 80179516 80179789 -86470507 + L1MD2 LINE L1 1241 1518 -5115 2 1196 35484 50 0 4 chrX 80180003 80185657 -86464639 + L1Md_Gf LINE L1 1 5589 -297 2 1196 8421 33 0 0 chrX 80185657 80186653 -86463643 + L1Md_T LINE L1 5587 6582 0 2 1196 308 231 52 103 chrX 80186849 80187023 -86463273 + L1MD2 LINE L1 4262 4426 -2111 2 1196 757 281 83 5 chrX 80187139 80187332 -86462964 + B3 SINE B2 9 216 0 2 1196 343 246 47 3 chrX 80187526 80187646 -86462650 + L1MB1 LINE L1 6008 6133 -56 2 1196 1291 45 0 0 chrX 80187651 80187808 -86462488 + B2_Mm1a SINE B2 2 158 -35 2 1196 348 24 0 0 chrX 80187808 80187849 -86462447 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 2 1196 475 133 69 30 chrX 80187871 80187972 -86462324 + Lx LINE L1 6545 6649 -5 2 1196 36 23 0 0 chrX 80188005 80188048 -86462248 + AT_rich Low_complexity Low_complexity 1 43 0 2 1196 394 241 104 41 chrX 80188141 80188362 -86461934 + L1MD2 LINE L1 4792 5026 -1511 2 1196 418 149 21 0 chrX 80188482 80188576 -86461720 - Lx9 LINE L1 -10 7634 7539 2 1196 3729 232 81 39 chrX 80189143 80190829 -86459467 - Lx7 LINE L1 0 7696 5939 2 1196 21 36 0 0 chrX 80190830 80190858 -86459438 + AT_rich Low_complexity Low_complexity 1 28 0 2 1196 292 309 9 0 chrX 80191075 80191185 -86459111 + L1MD2 LINE L1 5212 5322 -1215 2 1196 241 188 103 76 chrX 80191201 80191261 -86459035 - RMER17C LTR ERVK -131 279 226 2 1196 387 41 0 0 chrX 80191261 80191310 -86458986 + (GA)n Simple_repeat Simple_repeat 2 50 0 2 1196 241 188 103 76 chrX 80191310 80191433 -86458863 - RMER17C LTR ERVK -185 225 91 2 1196 344 272 47 103 chrX 80191439 80191528 -86458768 + L1MD2 LINE L1 5327 5414 -1123 2 1196 489 34 0 0 chrX 80191528 80191587 -86458709 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1196 1128 50 0 0 chrX 80191587 80191726 -86458570 - B1_Mm SINE Alu -8 139 1 2 1196 344 272 47 103 chrX 80191726 80191848 -86458448 + L1MD2 LINE L1 5415 5526 -1011 2 1196 391 321 143 30 chrX 80192203 80192636 -86457660 + L1MD2 LINE L1 5763 6244 -506 2 1196 331 286 40 0 chrX 80192845 80192971 -86457325 + L1MA4A LINE L1 5767 5897 -406 2 1196 210 128 0 0 chrX 80193001 80193040 -86457256 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1196 222 37 0 0 chrX 80193836 80193863 -86456433 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 2 1196 285 29 0 0 chrX 80194630 80194664 -86455632 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 1196 351 0 0 0 chrX 80194664 80194702 -86455594 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1196 223 28 0 53 chrX 80195051 80195089 -86455207 + (TTTTG)n Simple_repeat Simple_repeat 1 36 0 2 1196 21 0 0 0 chrX 80195419 80195440 -86454856 + AT_rich Low_complexity Low_complexity 1 21 0 2 1196 261 0 0 0 chrX 80195845 80195874 -86454422 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1196 27 49 0 0 chrX 80196718 80196759 -86453537 + AT_rich Low_complexity Low_complexity 1 41 0 2 1196 30 0 0 0 chrX 80197215 80197245 -86453051 + AT_rich Low_complexity Low_complexity 1 30 0 2 1196 26 0 0 0 chrX 80197354 80197380 -86452916 + AT_rich Low_complexity Low_complexity 1 26 0 2 1196 198 0 0 0 chrX 80197901 80197923 -86452373 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 1196 245 301 40 14 chrX 80197979 80198053 -86452243 + ID4_ SINE ID 1 76 -7 3 1196 5632 71 35 35 chrX 80198127 80198916 -86451380 - L1_Mus1 LINE L1 -2 6565 5777 3 1196 611 282 147 0 chrX 80199673 80199850 -86450446 + ID_B1 SINE B4 20 222 -2 3 1196 543 31 0 0 chrX 80202752 80202817 -86447479 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 1196 293 156 0 0 chrX 80203887 80203932 -86446364 - L1Md_F LINE L1 -6229 290 246 3 1196 22 35 0 0 chrX 80204251 80204280 -86446016 + AT_rich Low_complexity Low_complexity 1 29 0 3 1196 297 75 0 0 chrX 80205747 80205787 -86444509 + (CCCCCT)n Simple_repeat Simple_repeat 5 44 0 3 1196 456 93 0 0 chrX 80205853 80205928 -86444368 + (T)n Simple_repeat Simple_repeat 1 75 0 3 1196 420 20 0 0 chrX 80206379 80206428 -86443868 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 1196 22 0 0 0 chrX 80206821 80206843 -86443453 + AT_rich Low_complexity Low_complexity 1 22 0 3 1196 520 202 121 7 chrX 80206844 80206970 -86443326 - B1_Mur3 SINE Alu -8 141 8 3 1196 725 68 0 19 chrX 80207138 80207243 -86443053 + (TTTCC)n Simple_repeat Simple_repeat 3 105 0 3 1196 290 83 0 0 chrX 80207257 80207305 -86442991 - B1_Mur4 SINE Alu 0 150 103 3 1196 2346 223 57 26 chrX 80207974 80208521 -86441775 + Lx3C LINE L1 6425 6974 -2 3 1196 249 291 97 0 chrX 80208694 80208797 -86441499 + L1MD2 LINE L1 6150 6262 -97 3 1196 245 29 29 0 chrX 80208906 80208940 -86441356 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 3 1196 180 363 38 61 chrX 80209809 80209941 -86440355 + L2 LINE L2 2804 2932 -487 3 1196 7205 142 33 11 chrX 80210131 80211348 -86438948 - Lx4B LINE L1 -12 7046 5803 3 1196 25 31 0 0 chrX 80212432 80212464 -86437832 + AT_rich Low_complexity Low_complexity 1 32 0 3 1196 367 304 57 0 chrX 80212839 80212997 -86437299 - Lx6 LINE L1 -30 7430 7264 3 1196 2868 222 58 13 chrX 80212993 80214105 -86436191 + Lx6 LINE L1 5255 6472 -578 3 1196 2095 151 0 3 chrX 80214331 80214650 -86435646 - ORR1A3 LTR MaLR -8 318 1 3 1196 24 0 0 0 chrX 80215326 80215350 -86434946 + AT_rich Low_complexity Low_complexity 1 24 0 3 1196 25 53 0 18 chrX 80215534 80215569 -86434727 + AT_rich Low_complexity Low_complexity 1 35 0 3 1196 1121 79 0 0 chrX 80215569 80215709 -86434587 - B1_Mus1 SINE Alu -8 140 1 3 1196 25 53 0 18 chrX 80215709 80215730 -86434566 + AT_rich Low_complexity Low_complexity 1 21 0 3 149 544 243 347 58 chrX 80215926 80216168 -86434128 - L1MA4 LINE L1 -365 5935 5615 3 1197 468 0 0 0 chrX 80216168 80216220 -86434076 + (TA)n Simple_repeat Simple_repeat 1 52 0 3 1197 399 248 16 30 chrX 80216220 80216365 -86433931 - L1MA4 LINE L1 -698 5614 5476 3 1197 38029 41 0 3 chrX 80216361 80222582 -86427714 - L1Md_T LINE L1 0 6585 285 3 1197 371 242 0 21 chrX 80222588 80222681 -86427615 - L1_Mur3 LINE L1 -429 5451 5361 3 1197 214 324 206 0 chrX 80224352 80224420 -86425876 - MER5A DNA MER1_type -43 146 65 3 1197 368 258 0 31 chrX 80224507 80224603 -86425693 + B3 SINE B2 1 93 -123 3 1197 402 21 0 0 chrX 80224654 80224701 -86425595 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 3 1197 282 116 0 0 chrX 80226500 80226543 -86423753 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1197 534 31 0 0 chrX 80226960 80227024 -86423272 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 1197 476 284 79 30 chrX 80227462 80227665 -86422631 - MLT1B LTR MaLR -177 213 1 3 1197 234 0 0 0 chrX 80228709 80228735 -86421561 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 1197 22 56 0 0 chrX 80229802 80229838 -86420458 + AT_rich Low_complexity Low_complexity 1 36 0 3 1197 2638 73 87 0 chrX 80229964 80230332 -86419964 + MTB LTR MaLR 1 400 0 3 1197 371 231 72 36 chrX 80230561 80230700 -86419596 - MER103 DNA DNA -22 144 1 3 1197 269 329 152 39 chrX 80230788 80231044 -86419252 + B4A SINE B4 8 292 0 3 1197 27 0 0 0 chrX 80231460 80231487 -86418809 + AT_rich Low_complexity Low_complexity 1 27 0 3 1197 907 75 8 8 chrX 80232493 80232627 -86417669 + (TTCCC)n Simple_repeat Simple_repeat 3 136 0 3 1197 256 313 15 0 chrX 80232805 80232872 -86417424 + PB1D10 SINE Alu 36 103 -14 3 1197 486 46 0 0 chrX 80232872 80232937 -86417359 + (GAAA)n Simple_repeat Simple_repeat 4 68 0 3 1197 23 54 0 0 chrX 80233598 80233635 -86416661 + AT_rich Low_complexity Low_complexity 1 37 0 3 1197 324 70 0 0 chrX 80234273 80234316 -86415980 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 1197 16220 57 4 0 chrX 80234316 80237119 -86413177 - L1Md_F2 LINE L1 -28 6554 3742 3 1197 423 0 0 0 chrX 80237414 80237461 -86412835 + (TATG)n Simple_repeat Simple_repeat 2 48 0 3 1197 1328 223 74 3 chrX 80237547 80237844 -86412452 - ORR1B1 LTR MaLR -57 337 20 3 1197 6291 199 65 16 chrX 80237864 80238006 -86412290 - Lx5 LINE L1 0 7050 6898 3 1197 405 0 0 0 chrX 80238006 80238051 -86412245 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 1197 6291 201 43 14 chrX 80238051 80239461 -86410835 - Lx5 LINE L1 -153 6897 5473 3 1197 1170 51 16 38 chrX 80239469 80239652 -86410644 - L1_Mus3 LINE L1 -6 6632 6454 3 1197 22 35 0 0 chrX 80239710 80239739 -86410557 + AT_rich Low_complexity Low_complexity 1 29 0 3 1197 438 88 0 0 chrX 80240332 80240400 -86409896 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 1197 210 37 0 0 chrX 80240672 80240699 -86409597 + (CAGAGA)n Simple_repeat Simple_repeat 3 29 0 3 1197 473 200 0 18 chrX 80240812 80240924 -86409372 + (CATA)n Simple_repeat Simple_repeat 2 111 0 3 1197 220 304 206 71 chrX 80240930 80241100 -86409196 - B4 SINE B4 -98 194 2 3 1197 1658 138 23 91 chrX 80242000 80242350 -86407946 - ORR1A3 LTR MaLR 0 326 1 3 1197 1068 78 6 25 chrX 80242478 80242496 -86407800 + L1Md_F2 LINE L1 6013 6028 -556 3 1197 3186 53 2 10 chrX 80242496 80242914 -86407382 - L1Md_F3 LINE L1 -1 6583 6169 3 1197 1171 36 0 0 chrX 80242914 80243052 -86407244 + L1Md_F3 LINE L1 6030 6167 -415 3 1197 260 280 96 0 chrX 80244329 80244454 -86405842 + L1MB1 LINE L1 6020 6156 -12 3 1197 225 232 37 75 chrX 80244830 80244937 -86405359 + LTR16A1 LTR ERVL 350 452 -4 3 1197 683 229 176 16 chrX 80245668 80245850 -86404446 + B3 SINE B2 3 213 -3 3 1197 235 282 23 34 chrX 80246185 80246273 -86404023 - MT2B LTR ERVL -184 417 331 3 1197 180 0 0 0 chrX 80247038 80247058 -86403238 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 1197 243 0 0 0 chrX 80247058 80247084 -86403212 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 1197 24 32 0 0 chrX 80249314 80249345 -86400951 + AT_rich Low_complexity Low_complexity 1 31 0 3 1197 250 243 112 0 chrX 80250134 80250241 -86400055 + L1M5 LINE L1 3269 3387 -2759 3 1197 291 350 0 0 chrX 80250572 80250652 -86399644 + ID4_ SINE ID 2 81 -2 3 1197 252 200 132 79 chrX 80250669 80250759 -86399537 + L1MD LINE L1 3692 3798 -2348 3 1197 441 0 0 0 chrX 80250759 80250808 -86399488 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1197 252 200 132 79 chrX 80250808 80250869 -86399427 + L1MD LINE L1 3799 3851 -2295 3 1197 528 16 0 0 chrX 80250943 80251004 -86399292 + (GA)n Simple_repeat Simple_repeat 2 62 0 3 1197 886 183 204 0 chrX 80251176 80251362 -86398934 + URR1B DNA MER1_type 1 224 -1 3 1197 1014 84 21 0 chrX 80251589 80251732 -86398564 + B1_Mus1 SINE Alu 2 147 -1 3 1197 181 75 24 24 chrX 80251733 80251774 -86398522 + (CAAAA)n Simple_repeat Simple_repeat 3 43 0 3 1197 383 337 99 20 chrX 80251831 80252125 -86398171 + L1MD LINE L1 4402 4718 -1428 3 1197 606 302 43 29 chrX 80252127 80252335 -86397961 + B3 SINE B2 1 211 -5 3 1197 375 286 73 55 chrX 80252369 80252587 -86397709 + L1MC LINE L1 4699 4920 -1226 3 1197 510 301 52 19 chrX 80252704 80252914 -86397382 + MER33 DNA MER1_type 7 223 -101 3 1197 2212 209 8 19 chrX 80252963 80253485 -86396811 - Lx5 LINE L1 0 7050 6484 3 1197 250 286 36 45 chrX 80253503 80253613 -86396683 - ID4 SINE ID -33 119 11 3 1197 525 274 57 31 chrX 80253658 80253850 -86396446 - B3A SINE B2 -1 197 1 3 1197 3611 55 42 8 chrX 80254081 80254562 -86395734 + L1Md_F2 LINE L1 6075 6571 -11 3 1197 263 352 104 8 chrX 80254571 80254818 -86395478 - MIR SINE MIR -11 257 4 3 1197 1077 43 42 7 chrX 80255053 80255195 -86395101 + B1_Mm SINE Alu 1 147 0 3 1197 276 30 0 0 chrX 80255195 80255228 -86395068 + (A)n Simple_repeat Simple_repeat 1 33 0 3 1197 232 286 51 13 chrX 80255251 80255329 -86394967 + L1M3 LINE L1 5486 5566 -605 3 1197 35 54 0 0 chrX 80255381 80255437 -86394859 + AT_rich Low_complexity Low_complexity 1 56 0 3 1197 22 0 0 0 chrX 80256044 80256066 -86394230 + AT_rich Low_complexity Low_complexity 1 22 0 3 1197 231 333 43 0 chrX 80256931 80257000 -86393296 - ID4 SINE ID -1 82 11 3 1197 29 0 0 0 chrX 80257123 80257152 -86393144 + AT_rich Low_complexity Low_complexity 1 29 0 3 1197 246 128 0 0 chrX 80257910 80257949 -86392347 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 3 1197 387 0 0 0 chrX 80258269 80258312 -86391984 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1197 417 54 0 0 chrX 80259075 80259131 -86391165 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1197 293 338 103 22 chrX 80259133 80259269 -86391027 - RSINE1 SINE B4 -8 157 11 3 1197 22 0 0 0 chrX 80259567 80259589 -86390707 + AT_rich Low_complexity Low_complexity 1 22 0 3 1197 216 67 0 0 chrX 80259844 80259874 -86390422 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 3 1197 324 0 0 0 chrX 80260407 80260443 -86389853 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 1197 378 0 0 0 chrX 80260659 80260701 -86389595 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1197 1962 59 25 18 chrX 80260701 80260979 -86389317 - L1_Mus3 LINE L1 -16 6622 6343 3 1197 221 330 77 0 chrX 80261108 80261199 -86389097 - MIRc SINE MIR -6 262 165 3 1197 921 79 0 0 chrX 80261209 80261336 -86388960 + (TATATG)n Simple_repeat Simple_repeat 6 132 0 4 1197 203 103 26 0 chrX 80261819 80261858 -86388438 + (GAAA)n Simple_repeat Simple_repeat 1 40 0 4 1197 820 283 27 7 chrX 80263489 80263860 -86386436 - Lx5 LINE L1 -566 6894 6455 4 1197 820 303 106 9 chrX 80263862 80264212 -86386084 + Lx6 LINE L1 7050 7433 -27 4 1197 3120 121 32 11 chrX 80266467 80266936 -86383360 + Lx4A LINE L1 6494 6972 -86 4 1197 227 93 0 23 chrX 80267979 80268023 -86382273 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1197 1094 89 0 0 chrX 80268036 80268182 -86382114 - B1_Mus1 SINE Alu -1 147 2 4 1197 480 237 20 75 chrX 80268558 80268704 -86381592 - B1_Mur1 SINE Alu -1 148 11 4 1197 23 0 0 0 chrX 80269062 80269085 -86381211 + AT_rich Low_complexity Low_complexity 1 23 0 4 1197 851 284 233 8 chrX 80269117 80269469 -86380827 - Lx7 LINE L1 -883 6813 6383 4 1197 371 328 7 52 chrX 80269470 80269605 -86380691 + MTD LTR MaLR 86 214 -207 4 1197 31 26 0 0 chrX 80270680 80270718 -86379578 + AT_rich Low_complexity Low_complexity 1 38 0 4 1197 3271 160 3 19 chrX 80271428 80272001 -86378295 - RLTR12A LTR ERVK -4 564 1 4 1197 1723 212 11 163 chrX 80273632 80274166 -86376130 + RMER15 LTR ERVL 3 455 -120 4 1197 214 197 16 0 chrX 80274166 80274227 -86376069 + A-rich Low_complexity Low_complexity 5 66 0 4 1197 267 128 0 0 chrX 80274230 80274269 -86376027 + RMER15 LTR ERVL 455 493 -82 4 1197 332 263 166 64 chrX 80274336 80274523 -86375773 - RMER21B LTR ERV1 -289 553 348 4 1197 346 274 0 0 chrX 80274699 80274772 -86375524 + RMER15 LTR ERVL 487 559 -16 4 1197 382 347 40 20 chrX 80275110 80275260 -86375036 + MIR SINE MIR 25 177 -85 4 1197 332 289 115 0 chrX 80275629 80275733 -86374563 - MIR3 SINE MIR -9 199 84 4 1197 1862 180 62 19 chrX 80276286 80276725 -86373571 - RMER19A LTR ERVK -352 385 1 4 1197 376 321 29 14 chrX 80277222 80277361 -86372935 + B1_Mur2 SINE Alu 7 147 -2 4 1197 252 310 149 20 chrX 80277436 80277584 -86372712 + MIR SINE MIR 71 237 -25 4 1197 502 296 77 48 chrX 80278012 80278221 -86372075 - MLT1A0 LTR MaLR -150 215 1 4 1197 1213 21 0 0 chrX 80278318 80278460 -86371836 + B1_Mm SINE Alu 1 142 -5 4 1197 1291 161 0 5 chrX 80278784 80279008 -86371288 - Lx3A LINE L1 -6 6975 6753 4 1197 1476 101 19 0 chrX 80279009 80279216 -86371080 + Lx3A LINE L1 6388 6598 -383 4 1197 305 287 101 65 chrX 80279244 80279382 -86370914 - Lx8 LINE L1 -187 7286 7144 4 1197 452 347 31 47 chrX 80279449 80279703 -86370593 - MIR SINE MIR 0 262 13 4 1197 203 152 22 0 chrX 80279762 80279808 -86370488 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 1197 321 242 103 21 chrX 80280223 80280417 -86369879 - L1MA7 LINE L1 -1 6290 6081 4 1197 432 185 871 0 chrX 80280852 80280968 -86369328 + MTC LTR MaLR 205 421 0 4 1197 8008 36 0 0 chrX 80281305 80282896 -86367400 - L1Md_T LINE L1 0 6582 4992 4 1197 859 164 227 11 chrX 80283015 80283200 -86367096 - URR1A DNA MER1_type -1 225 1 4 1197 228 352 142 29 chrX 80283266 80283471 -86366825 - MIRb SINE MIR -12 256 29 4 1197 3624 162 7 2 chrX 80285005 80285599 -86364697 - Lx2B LINE L1 0 7000 6404 4 1197 208 0 62 0 chrX 80285932 80285964 -86364332 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1197 3841 34 0 11 chrX 80285982 80286453 -86363843 - L1Md_F2 LINE L1 0 6582 6117 4 1197 180 311 26 39 chrX 80287551 80287628 -86362668 - L2b LINE L2 -7 3368 3293 4 1197 213 139 0 0 chrX 80289288 80289331 -86360965 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 1197 214 341 162 29 chrX 80290027 80290163 -86360133 - MER5A DNA MER1_type 0 189 36 4 1197 520 287 108 0 chrX 80291834 80291963 -86358333 - B1_Mur1 SINE Alu -5 144 2 4 1197 282 87 0 0 chrX 80292042 80292088 -86358208 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1197 261 0 0 0 chrX 80293128 80293157 -86357139 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1197 201 39 0 0 chrX 80293277 80293303 -86356993 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1197 264 378 62 73 chrX 80293346 80293634 -86356662 + LTR16E1 LTR ERVL 180 464 -74 4 1197 21 36 0 0 chrX 80293798 80293826 -86356470 + AT_rich Low_complexity Low_complexity 1 28 0 4 1197 23 33 0 0 chrX 80295921 80295951 -86354345 + AT_rich Low_complexity Low_complexity 1 30 0 4 1197 6156 118 25 0 chrX 80295989 80296919 -86353377 - Lx LINE L1 0 6654 5712 4 1197 420 20 0 0 chrX 80297542 80297591 -86352705 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1197 1438 214 86 22 chrX 80298426 80298832 -86351464 + RMER10A LTR ERVL 3 434 -8 4 1197 675 0 0 0 chrX 80298834 80298909 -86351387 + (TTC)n Simple_repeat Simple_repeat 1 75 0 4 1197 628 344 21 28 chrX 80299128 80299418 -86350878 - B4 SINE B4 0 292 5 4 1197 463 248 44 88 chrX 80300192 80300329 -86349967 + B3A SINE B2 1 131 -67 4 1197 24 67 0 0 chrX 80300780 80300825 -86349471 + AT_rich Low_complexity Low_complexity 1 45 0 4 1197 349 328 15 15 chrX 80301080 80301210 -86349086 + B1F SINE Alu 18 147 -2 4 1197 1765 116 45 38 chrX 80301236 80301550 -86348746 + Lx LINE L1 6339 6654 0 4 1197 187 174 43 21 chrX 80301872 80301919 -86348377 + L3 LINE CR1 1895 1942 -2547 4 1197 213 202 35 44 chrX 80302119 80302233 -86348063 + (TATAA)n Simple_repeat Simple_repeat 4 116 0 4 1197 351 302 27 48 chrX 80302614 80302760 -86347536 + Charlie4 DNA MER1_type 1817 1959 -2 4 1197 180 77 0 0 chrX 80304096 80304122 -86346174 + (CATA)n Simple_repeat Simple_repeat 3 28 0 4 1197 1057 73 7 0 chrX 80304724 80304860 -86345436 + B1_Mus1 SINE Alu 1 137 -11 4 1197 270 0 0 0 chrX 80304860 80304890 -86345406 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 1197 2303 156 133 8 chrX 80305264 80305773 -86344523 - RMER4B LTR ERVK -12 573 1 4 1197 22 35 0 0 chrX 80306154 80306183 -86344113 + AT_rich Low_complexity Low_complexity 1 29 0 4 1197 196 30 29 29 chrX 80306326 80306360 -86343936 + (TTAAA)n Simple_repeat Simple_repeat 1 34 0 4 1197 21 0 0 0 chrX 80306578 80306599 -86343697 + AT_rich Low_complexity Low_complexity 1 21 0 4 1197 317 288 108 72 chrX 80306989 80307240 -86343056 - RMER2 LTR ERV1 0 567 308 4 1197 21 0 0 0 chrX 80307421 80307442 -86342854 + AT_rich Low_complexity Low_complexity 1 21 0 4 1197 1235 21 14 0 chrX 80307564 80307709 -86342587 - B1_Mm SINE Alu 0 147 1 4 1197 319 258 9 110 chrX 80308066 80308175 -86342121 - B3 SINE B2 -6 210 113 4 1197 405 0 0 0 chrX 80308314 80308359 -86341937 + (TC)n Simple_repeat Simple_repeat 2 46 0 4 1197 22 0 0 0 chrX 80309457 80309479 -86340817 + AT_rich Low_complexity Low_complexity 1 22 0 4 1197 5526 198 36 48 chrX 80309618 80310572 -86339724 - Lx2B LINE L1 -13 6987 6033 4 1197 204 40 0 0 chrX 80310572 80310597 -86339699 + (TCCC)n Simple_repeat Simple_repeat 1 25 0 4 1197 5526 198 36 48 chrX 80310597 80310926 -86339370 - Lx2B LINE L1 -968 6032 5720 4 1197 547 21 183 0 chrX 80312055 80312148 -86338148 + L1Md_F3 LINE L1 6474 6583 -1 4 1197 297 0 0 0 chrX 80312300 80312333 -86337963 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 1197 21 36 0 0 chrX 80312439 80312467 -86337829 + AT_rich Low_complexity Low_complexity 1 28 0 4 1197 581 144 10 0 chrX 80312563 80312667 -86337629 + CT-rich Low_complexity Low_complexity 4 108 0 4 1197 272 265 0 0 chrX 80313642 80313691 -86336605 - RSINE1 SINE B4 -114 51 3 4 1197 25 65 0 0 chrX 80313715 80313761 -86336535 + AT_rich Low_complexity Low_complexity 1 46 0 4 1197 183 370 123 0 chrX 80314034 80314115 -86336181 + L2b LINE L2 3245 3335 -40 4 1197 903 290 17 41 chrX 80314530 80314821 -86335475 - B4A SINE B4 -8 284 1 4 1197 4498 239 71 113 chrX 80315107 80316596 -86333700 - Lx6 LINE L1 -4 7456 6030 4 1197 1149 180 171 0 chrX 80316595 80316900 -86333396 - L1_Mur3 LINE L1 -4180 1700 1344 4 1197 2659 282 39 11 chrX 80316904 80317860 -86332436 - L1_Mur3 LINE L1 -6902 826 45 4 1197 21 0 0 0 chrX 80317869 80317890 -86332406 + AT_rich Low_complexity Low_complexity 1 21 0 4 1197 335 235 200 8 chrX 80317929 80318049 -86332247 + B1F SINE Alu 1 143 -6 4 1197 243 382 0 13 chrX 80318383 80318460 -86331836 + ID4_ SINE ID 2 77 -6 4 1197 23 78 0 0 chrX 80318519 80318570 -86331726 + AT_rich Low_complexity Low_complexity 1 51 0 4 1197 504 0 0 0 chrX 80319160 80319216 -86331080 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 4 1197 774 148 17 69 chrX 80320256 80320430 -86329866 - L1Md_F2 LINE L1 0 6582 6418 4 1197 184 288 73 24 chrX 80321146 80321228 -86329068 - L3 LINE CR1 -715 3774 3689 4 1197 195 366 101 36 chrX 80321783 80321922 -86328374 - MIRb SINE MIR -52 216 69 4 1197 357 125 0 0 chrX 80322629 80322685 -86327611 + (TATG)n Simple_repeat Simple_repeat 1 56 0 4 1197 332 264 8 0 chrX 80323191 80323316 -86326980 + (TA)n Simple_repeat Simple_repeat 2 127 0 4 1197 762 199 14 7 chrX 80323396 80323538 -86326758 + B1_Mur4 SINE Alu 1 143 -7 4 1197 234 23 22 44 chrX 80323548 80323593 -86326703 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 4 1197 1213 139 10 0 chrX 80324197 80324406 -86325890 - Lx LINE L1 -6 6648 6438 4 1197 730 168 137 75 chrX 80324561 80324773 -86325523 - URR1A DNA MER1_type 0 226 2 4 1197 34 55 0 0 chrX 80325607 80325662 -86324634 + AT_rich Low_complexity Low_complexity 1 55 0 4 1197 232 125 20 20 chrX 80326332 80326381 -86323915 + A-rich Low_complexity Low_complexity 1 49 0 4 1197 23 33 0 0 chrX 80326710 80326740 -86323556 + AT_rich Low_complexity Low_complexity 1 30 0 4 1197 291 308 9 37 chrX 80326999 80327107 -86323189 - B4A SINE B4 0 292 188 5 1197 279 302 101 25 chrX 80327127 80327166 -86323130 - B4A SINE B4 -163 129 84 5 1197 315 0 0 0 chrX 80327166 80327201 -86323095 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 5 1197 279 302 101 25 chrX 80327201 80327280 -86323016 - B4A SINE B4 -209 83 2 5 1197 207 139 0 0 chrX 80327453 80327489 -86322807 + (TATATG)n Simple_repeat Simple_repeat 6 41 0 5 1197 777 319 45 59 chrX 80327496 80327786 -86322510 - B4A SINE B4 -2 290 5 5 1197 296 281 48 75 chrX 80327945 80328091 -86322205 + B3A SINE B2 41 182 -16 5 1197 539 254 26 0 chrX 80328204 80328318 -86321978 + B3 SINE B2 100 216 0 5 1197 1146 244 71 28 chrX 80329154 80329508 -86320788 - ORR1D2 LTR MaLR 0 370 2 5 1197 1127 111 6 0 chrX 80329994 80330175 -86320121 + Lx2 LINE L1 6816 6997 0 5 1197 234 247 0 36 chrX 80330398 80330482 -86319814 - Lx4B LINE L1 -5 7053 6973 5 1197 23 0 0 0 chrX 80330506 80330529 -86319767 + AT_rich Low_complexity Low_complexity 1 23 0 5 1197 278 291 33 44 chrX 80330763 80330853 -86319443 + MER31A LTR ERV1 1 89 -396 5 1197 6662 62 0 0 chrX 80330925 80331765 -86318531 - L1Md_T LINE L1 0 6582 5743 5 1197 3980 54 0 2 chrX 80331827 80332324 -86317972 - L1Md_F2 LINE L1 -12 6570 6075 5 1197 993 64 0 0 chrX 80332324 80332449 -86317847 + L1Md_F2 LINE L1 5957 6081 -501 5 1197 1999 82 7 28 chrX 80332443 80332731 -86317565 - L1_Mus2 LINE L1 -21 6545 6264 5 1197 459 378 41 58 chrX 80332927 80333162 -86317134 + MER31A LTR ERV1 75 307 -178 5 1197 4729 43 0 0 chrX 80333162 80333739 -86316557 - L1Md_T LINE L1 0 6582 6006 5 1197 459 378 41 58 chrX 80333739 80333919 -86316377 + MER31A LTR ERV1 308 483 -2 5 1197 7769 73 2 1 chrX 80334520 80335876 -86314420 - L1Md_F2 LINE L1 0 6582 5313 5 1197 440 300 111 12 chrX 80336129 80336291 -86314005 + B3A SINE B2 6 183 -15 5 1197 615 117 0 0 chrX 80336339 80336442 -86313854 + (TA)n Simple_repeat Simple_repeat 1 103 0 5 1197 198 0 0 0 chrX 80336442 80336463 -86313833 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 1197 286 323 0 21 chrX 80336512 80336607 -86313689 + PB1D7 SINE Alu 23 115 -5 5 1197 477 90 0 0 chrX 80337483 80337550 -86312746 + (TTA)n Simple_repeat Simple_repeat 3 69 0 5 1197 320 335 138 6 chrX 80337573 80337732 -86312564 + MER5A DNA MER1_type 3 182 -7 5 1197 332 376 57 34 chrX 80337732 80337941 -86312355 - MIRb SINE MIR -41 227 14 5 1197 729 58 0 0 chrX 80338192 80338295 -86312001 + (TCTCTG)n Simple_repeat Simple_repeat 6 108 0 5 1197 327 91 0 0 chrX 80338295 80338339 -86311957 - HAL1-3A_ME LINE L1 -849 2009 1966 5 1197 491 319 0 25 chrX 80338396 80338515 -86311781 - B4A SINE B4 -172 120 5 5 1197 21 0 0 0 chrX 80339325 80339346 -86310950 + AT_rich Low_complexity Low_complexity 1 21 0 5 1197 80 0 0 0 chrX 80339436 80339516 -86310780 + AT_rich Low_complexity Low_complexity 1 80 0 5 1197 22 56 0 0 chrX 80339648 80339684 -86310612 + AT_rich Low_complexity Low_complexity 1 36 0 5 1197 388 300 24 48 chrX 80339832 80339958 -86310338 + RSINE1 SINE B4 12 134 -31 5 1197 26 30 0 0 chrX 80339958 80339991 -86310305 + AT_rich Low_complexity Low_complexity 1 33 0 5 1197 1930 181 114 48 chrX 80340342 80340886 -86309410 - RMER6C LTR ERVK 0 690 111 5 1197 372 103 0 0 chrX 80342096 80342154 -86308142 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1197 198 0 0 0 chrX 80342928 80342950 -86307346 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 5 1197 197 178 22 0 chrX 80342996 80343041 -86307255 + CT-rich Low_complexity Low_complexity 1 46 0 5 1197 932 279 9 110 chrX 80343303 80343338 -86306958 - Lx6 LINE L1 -9 7451 7428 5 1197 4851 24 5 2 chrX 80343338 80343913 -86306383 - L1Md_F3 LINE L1 -14 6570 5994 5 1197 1078 135 76 0 chrX 80343912 80344097 -86306199 - Lx2 LINE L1 -18 6979 6781 5 1197 932 279 9 110 chrX 80344097 80344406 -86305890 - Lx6 LINE L1 -33 7427 7142 5 1197 333 0 0 0 chrX 80344885 80344922 -86305374 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1197 1366 75 11 0 chrX 80345063 80345251 -86305045 + B2_Mm1t SINE B2 4 193 0 5 1197 963 75 22 0 chrX 80345251 80345384 -86304912 + B1_Mus1 SINE Alu 1 137 -11 5 1197 528 0 42 0 chrX 80345387 80345459 -86304837 + (GA)n Simple_repeat Simple_repeat 2 76 0 5 1197 321 26 0 0 chrX 80345460 80345498 -86304798 + (GAAAA)n Simple_repeat Simple_repeat 1 38 0 5 1197 223 250 25 38 chrX 80346186 80346265 -86304031 + B2_Mm1t SINE B2 1 78 -115 5 1197 21 0 0 0 chrX 80346379 80346400 -86303896 + AT_rich Low_complexity Low_complexity 1 21 0 5 1198 24 53 0 0 chrX 80347172 80347210 -86303086 + AT_rich Low_complexity Low_complexity 1 38 0 5 1198 249 250 56 127 chrX 80348001 80348143 -86302153 + MIRc SINE MIR 16 147 -121 5 1198 3864 48 4 0 chrX 80348161 80348642 -86301654 + L1_Mus1 LINE L1 6085 6567 0 5 1198 2960 124 81 2 chrX 80349366 80349858 -86300438 + Lx LINE L1 6124 6654 0 5 1198 2920 31 3 0 chrX 80351068 80351417 -86298879 - L1Md_F2 LINE L1 -501 6081 5732 5 1198 206 62 0 30 chrX 80351819 80351852 -86298444 + (TCTCCC)n Simple_repeat Simple_repeat 6 37 0 5 1198 26 30 0 0 chrX 80352062 80352095 -86298201 + AT_rich Low_complexity Low_complexity 1 33 0 5 1198 1317 52 0 0 chrX 80352524 80352698 -86297598 + (TCTA)n Simple_repeat Simple_repeat 1 174 0 5 1198 552 30 0 0 chrX 80353550 80353616 -86296680 + (TC)n Simple_repeat Simple_repeat 1 66 0 5 1198 568 297 40 13 chrX 80354330 80354480 -86295816 - RSINE1 SINE B4 -11 154 1 5 1198 22 70 0 0 chrX 80355038 80355081 -86295215 + AT_rich Low_complexity Low_complexity 1 43 0 5 1198 189 74 0 0 chrX 80356350 80356377 -86293919 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1198 29 70 0 0 chrX 80356456 80356513 -86293783 + AT_rich Low_complexity Low_complexity 1 57 0 5 1198 2858 188 25 14 chrX 80356594 80357166 -86293130 - Lx3C LINE L1 -443 6533 5956 5 1198 1534 153 0 15 chrX 80357164 80357429 -86292867 + L1_Mur1 LINE L1 2313 2573 -3313 5 1198 4091 69 18 4 chrX 80358323 80358874 -86291422 - L1Md_F2 LINE L1 0 6582 6024 5 1198 332 22 0 22 chrX 80359600 80359646 -86290650 + (TAA)n Simple_repeat Simple_repeat 3 47 0 5 1198 524 51 13 0 chrX 80359813 80359891 -86290405 + L1Md_F2 LINE L1 6503 6581 -1 5 1198 270 295 29 7 chrX 80360414 80360554 -86289742 + (CATATA)n Simple_repeat Simple_repeat 4 146 0 5 1198 22 70 0 0 chrX 80360899 80360942 -86289354 + AT_rich Low_complexity Low_complexity 1 43 0 5 1198 870 159 12 8 chrX 80361199 80361364 -86288932 - B2_Mm2 SINE B2 -23 170 1 5 1198 2236 153 152 7 chrX 80361377 80361831 -86288465 + Lx3C LINE L1 6454 6973 -3 5 1198 319 370 36 14 chrX 80362689 80362829 -86287467 + B1F1 SINE Alu 1 143 -6 5 1198 234 0 0 0 chrX 80363098 80363124 -86287172 + (CAAAC)n Simple_repeat Simple_repeat 4 29 0 5 1198 180 0 0 0 chrX 80363645 80363665 -86286631 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1198 259 340 106 26 chrX 80363798 80363822 -86286474 - B4A SINE B4 -43 249 132 5 1198 396 291 0 83 chrX 80363822 80363942 -86286354 - PB1D9 SINE Alu -2 118 9 5 1198 416 243 75 0 chrX 80364156 80364263 -86286033 - Lx9 LINE L1 -247 7397 7283 5 1198 198 0 0 0 chrX 80365087 80365109 -86285187 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1198 309 51 0 0 chrX 80365720 80365759 -86284537 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 1198 3244 309 34 84 chrX 80366092 80366578 -86283718 - Lx5 LINE L1 -19 7031 6563 5 1198 489 34 0 0 chrX 80366578 80366637 -86283659 + (TC)n Simple_repeat Simple_repeat 2 60 0 5 1198 3248 253 26 50 chrX 80366637 80368032 -86282264 - Lx5 LINE L1 -488 6562 5218 5 1198 897 338 73 41 chrX 80368380 80368821 -86281475 - MLT1D LTR MaLR -50 455 1 5 1198 1466 261 8 10 chrX 80369929 80370312 -86279984 - ORR1C1 LTR MaLR 0 384 3 5 1198 1661 198 55 11 chrX 80370314 80370683 -86279613 - ORR1C1-int LTR MaLR -193 1599 1165 5 1198 282 148 32 32 chrX 80370951 80371014 -86279282 - ORR1C1-int LTR MaLR -334 1175 1113 5 1198 459 0 99 0 chrX 80371014 80371105 -86279191 + (TC)n Simple_repeat Simple_repeat 2 101 0 5 1198 3127 295 23 31 chrX 80371105 80372105 -86278191 - ORR1C1-int LTR MaLR -378 992 1 5 1198 1726 172 80 3 chrX 80372105 80372440 -86277856 - ORR1C1 LTR MaLR -17 361 1 5 1198 197 143 0 45 chrX 80372898 80372942 -86277354 + (TATG)n Simple_repeat Simple_repeat 3 44 0 5 1198 645 217 0 0 chrX 80373903 80374023 -86276273 + MTC LTR MaLR 1 120 -301 5 1198 7072 112 15 17 chrX 80374023 80374703 -86275593 - Lx LINE L1 0 6654 5984 5 1198 3211 41 5 10 chrX 80374703 80375101 -86275195 - MTA_Mm LTR MaLR 0 396 1 5 1198 7072 127 12 9 chrX 80375101 80375911 -86274385 - Lx LINE L1 -671 5983 5164 5 1198 1494 164 34 11 chrX 80375925 80376190 -86274106 + MTC LTR MaLR 151 421 0 5 1198 274 364 0 10 chrX 80376673 80376773 -86273523 + ID_B1 SINE B4 90 188 -36 5 1198 507 377 47 29 chrX 80377108 80377384 -86272912 - B4A SINE B4 0 292 12 5 1198 263 322 56 0 chrX 80377395 80377538 -86272758 + L1MA6 LINE L1 6149 6299 -1 5 1198 2478 81 3 16 chrX 80380417 80380783 -86269513 - MusHAL1 LINE L1 0 2712 2352 5 1198 1860 165 6 12 chrX 80380834 80381159 -86269137 - ORR1B1 LTR MaLR -8 386 64 5 1198 518 0 0 0 chrX 80381160 80381218 -86269078 - L1Md_F2 LINE L1 -419 6163 6106 5 1198 1516 61 0 14 chrX 80381218 80381433 -86268863 + L1Md_F2 LINE L1 6370 6581 -1 5 1198 443 192 0 0 chrX 80381433 80381506 -86268790 - ORR1B1 LTR MaLR -321 73 1 5 1198 37 86 0 0 chrX 80381872 80381965 -86268331 + AT_rich Low_complexity Low_complexity 1 93 0 5 1198 16163 182 45 29 chrX 80382324 80382553 -86267743 - L1_Mur3 LINE L1 -1016 4861 4630 5 1198 279 0 0 0 chrX 80382553 80382584 -86267712 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1198 16163 182 45 29 chrX 80382584 80385116 -86265180 - L1_Mur3 LINE L1 -1248 4629 2058 5 1198 396 0 0 0 chrX 80385116 80385160 -86265136 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1198 16163 205 36 24 chrX 80385160 80386239 -86264057 - L1_Mur3 LINE L1 -3820 2057 920 5 1198 3080 137 36 13 chrX 80387147 80387673 -86262623 - Lx3B LINE L1 -3 6970 6433 5 1198 412 293 56 6 chrX 80387930 80388055 -86262241 - B1F SINE Alu -11 138 9 5 1198 4477 41 0 0 chrX 80388295 80388877 -86261419 + L1Md_F2 LINE L1 6027 6582 0 5 1198 227 170 38 0 chrX 80389210 80389263 -86261033 + (TA)n Simple_repeat Simple_repeat 1 55 0 5 1198 1186 34 0 20 chrX 80394420 80394570 -86255726 - B1_Mus2 SINE Alu 0 147 1 5 1198 308 390 29 0 chrX 80394721 80394826 -86255470 - MER5A DNA MER1_type -78 111 4 6 1198 890 69 0 0 chrX 80395113 80395243 -86255053 - L1Md_F2 LINE L1 -12 6570 6441 6 1198 445 339 31 0 chrX 80395838 80395965 -86254331 + B1_Mur2 SINE Alu 4 134 -15 6 1198 267 31 0 0 chrX 80395965 80395997 -86254299 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 6 1198 2028 141 70 22 chrX 80396002 80396408 -86253888 - Lx3C LINE L1 -809 6167 5735 6 1198 336 262 236 20 chrX 80396573 80396721 -86253575 + MIR SINE MIR 83 262 0 6 1198 324 94 0 0 chrX 80396953 80397006 -86253290 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 6 1198 2622 252 56 112 chrX 80397454 80397539 -86252757 - L1MC1 LINE L1 -19 6314 6255 6 1198 1956 36 8 8 chrX 80397539 80397788 -86252508 - L1Md_F3 LINE L1 0 6584 6336 6 1198 2622 279 62 17 chrX 80397788 80398725 -86251571 - L1MC1 LINE L1 -79 6254 5270 6 1198 459 189 187 9 chrX 80398736 80398843 -86251453 + B1_Mur1 SINE Alu 13 138 -11 6 1198 477 0 0 0 chrX 80398843 80398896 -86251400 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1198 227 326 36 7 chrX 80398897 80399036 -86251260 - L1MC1 LINE L1 -869 5277 5135 6 1198 682 303 140 0 chrX 80399125 80399353 -86250943 - Ricksha_c DNA MuDR -1146 902 643 6 1198 1124 266 125 16 chrX 80399808 80400424 -86249872 - L1MC1 LINE L1 -1269 4877 4195 6 1198 881 296 133 0 chrX 80400535 80400843 -86249453 + MTD LTR MaLR 1 349 -70 6 1198 33 43 0 0 chrX 80400997 80401044 -86249252 + AT_rich Low_complexity Low_complexity 1 47 0 6 1198 7491 99 12 2 chrX 80401044 80402381 -86247915 - L1_Mus3 LINE L1 -4 6634 5286 6 1198 8036 114 71 16 chrX 80402374 80403705 -86246591 - Lx3_Mus LINE L1 -17 6992 5589 6 1198 244 365 6 13 chrX 80403763 80403921 -86246375 - L1M5 LINE L1 -371 5808 5652 6 1198 387 0 0 0 chrX 80404843 80404886 -86245410 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1198 543 359 16 65 chrX 80404926 80405233 -86245063 - B4 SINE B4 0 292 1 6 1198 739 311 53 56 chrX 80405449 80405526 -86244770 - Lx8 LINE L1 -213 7260 7192 6 1198 188 35 35 0 chrX 80405526 80405555 -86244741 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6 1198 739 323 51 52 chrX 80405555 80405891 -86244405 - Lx8 LINE L1 -282 7191 6836 6 1198 211 363 33 66 chrX 80405954 80406075 -86244221 + B1_Mus1 SINE Alu 27 143 -5 6 1198 478 80 18 17 chrX 80406606 80406696 -86243600 + L1Md_F3 LINE L1 5872 5958 -624 6 1198 226 232 35 18 chrX 80406720 80406777 -86243519 - MER34A LTR ERV1 -509 62 5 6 1198 195 254 179 0 chrX 80408050 80408117 -86242179 - MIR SINE MIR -2 260 182 6 1198 690 153 14 7 chrX 80408128 80408266 -86242030 - L1MA7 LINE L1 -1 6290 6152 6 1198 313 230 67 50 chrX 80408275 80408394 -86241902 + L1M2 LINE L1 5527 5647 -653 6 1198 491 191 0 16 chrX 80408396 80408524 -86241772 + (TCTA)n Simple_repeat Simple_repeat 2 127 0 6 1198 690 87 117 8 chrX 80409320 80409448 -86240848 - L1_Mus3 LINE L1 -7 6631 6490 6 1198 785 196 0 0 chrX 80410201 80410334 -86239962 - B1_Mus2 SINE Alu -5 142 10 6 1198 534 215 31 0 chrX 80410455 80410585 -86239711 - Lx7 LINE L1 -4 7692 7559 6 1198 634 259 148 28 chrX 80410616 80410866 -86239430 - Lx7 LINE L1 -220 7476 7197 6 1198 216 214 89 0 chrX 80411291 80411347 -86238949 + PB1D10 SINE Alu 54 114 -3 6 1198 222 174 0 0 chrX 80411840 80411886 -86238410 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 1198 234 0 0 0 chrX 80412003 80412029 -86238267 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 6 1198 547 349 86 31 chrX 80413081 80413338 -86236958 - B4 SINE B4 -11 281 11 6 1198 479 199 13 40 chrX 80413670 80413803 -86236493 - Lx9 LINE L1 -21 7623 7494 6 1198 3324 35 2 0 chrX 80413803 80414198 -86236098 + MTA_Mm LTR MaLR 1 396 0 6 1198 479 199 13 40 chrX 80414198 80414216 -86236080 - Lx9 LINE L1 -151 7493 7476 6 1198 522 0 0 0 chrX 80414414 80414472 -86235824 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 1198 369 62 0 0 chrX 80414472 80414519 -86235777 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1198 538 287 137 6 chrX 80414683 80414865 -86235431 + ID_B1 SINE B4 6 211 -13 6 1198 288 0 0 0 chrX 80414865 80414897 -86235399 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 6 1198 556 262 450 43 chrX 80414958 80415204 -86235092 - ORR1D2 LTR MaLR -4 366 21 6 1198 31 26 0 0 chrX 80416708 80416746 -86233550 + AT_rich Low_complexity Low_complexity 1 38 0 6 1198 195 250 19 37 chrX 80416963 80417017 -86233279 - MIR SINE MIR -102 160 108 6 1198 477 320 38 59 chrX 80417098 80417387 -86232909 - B4A SINE B4 -6 286 4 6 1198 687 187 7 56 chrX 80417495 80417637 -86232659 - B1_Mur3 SINE Alu -6 143 9 6 1198 342 305 101 30 chrX 80418789 80418958 -86231338 - MIR SINE MIR 0 262 82 6 1198 414 262 101 0 chrX 80419423 80419572 -86230724 - L1MD2 LINE L1 -24 6335 6172 6 1198 318 381 94 16 chrX 80419789 80419981 -86230315 - L1MDb LINE L1 -6161 248 42 6 1198 4716 84 7 1 chrX 80420445 80421123 -86229173 - MusHAL1 LINE L1 -646 2066 1385 6 1198 745 256 43 0 chrX 80421124 80421288 -86229008 - B3 SINE B2 -38 178 8 6 1198 288 0 0 0 chrX 80422326 80422358 -86227938 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 1198 360 125 0 0 chrX 80422378 80422442 -86227854 + (TA)n Simple_repeat Simple_repeat 1 64 0 6 1198 204 214 0 0 chrX 80422443 80422499 -86227797 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 6 1198 682 69 20 0 chrX 80423275 80423376 -86226920 + (TA)n Simple_repeat Simple_repeat 2 104 0 6 1198 1231 276 53 19 chrX 80423670 80424138 -86226158 - RMER5 LTR ERV1 0 534 6 6 1198 189 94 0 0 chrX 80425466 80425498 -86224798 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 1198 270 148 0 0 chrX 80426443 80426497 -86223799 + (CAG)n Simple_repeat Simple_repeat 3 56 0 6 1198 257 302 97 15 chrX 80426631 80426826 -86223470 - L1MB8 LINE L1 -126 6052 5842 6 1198 234 0 0 0 chrX 80426904 80426930 -86223366 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1198 442 344 42 48 chrX 80427215 80427404 -86222892 - MLT1G LTR MaLR -259 332 145 6 1198 26 30 0 0 chrX 80427919 80427952 -86222344 + AT_rich Low_complexity Low_complexity 1 33 0 6 1198 213 275 0 28 chrX 80427953 80428024 -86222272 + (CATATA)n Simple_repeat Simple_repeat 1 69 0 6 1198 227 245 0 0 chrX 80427974 80428023 -86222273 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1198 22 35 0 0 chrX 80428243 80428272 -86222024 + AT_rich Low_complexity Low_complexity 1 29 0 6 1198 3724 212 48 29 chrX 80428275 80429139 -86221157 - Lx7 LINE L1 -5 7691 6812 6 1198 1106 233 79 82 chrX 80429598 80429953 -86220343 - MTD LTR MaLR -65 354 1 6 1198 455 48 16 0 chrX 80430113 80430175 -86220121 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 6 1198 7075 109 9 44 chrX 80430617 80431845 -86218451 + Lx LINE L1 5471 6654 0 6 1198 522 0 0 0 chrX 80432023 80432081 -86218215 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 1198 1888 229 58 60 chrX 80432175 80432694 -86217602 + Lx5 LINE L1 6531 7048 -2 6 1198 296 325 12 94 chrX 80432756 80432840 -86217456 - MLT1A LTR MaLR -207 167 89 6 1198 1043 73 0 0 chrX 80432840 80432977 -86217319 + B1_Mm SINE Alu 1 137 -10 6 1198 271 0 0 49 chrX 80432977 80433018 -86217278 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 1198 296 325 12 94 chrX 80433018 80433102 -86217194 - MLT1A LTR MaLR -286 88 13 6 1198 1693 68 25 13 chrX 80434174 80434412 -86215884 + L1_Mus1 LINE L1 6326 6566 -1 6 1198 293 370 57 13 chrX 80434438 80434597 -86215699 + LTR16C LTR ERVL 306 471 -18 6 1198 21 36 0 0 chrX 80436257 80436285 -86214011 + AT_rich Low_complexity Low_complexity 1 28 0 6 1198 982 128 114 17 chrX 80436598 80436773 -86213523 + B2_Mm1t SINE B2 2 193 0 6 1198 561 314 18 30 chrX 80436926 80437090 -86213206 + RSINE1 SINE B4 2 163 -2 6 1198 283 315 96 96 chrX 80437090 80437123 -86213173 + B3A SINE B2 1 197 -1 6 1198 225 0 0 0 chrX 80437424 80437449 -86212847 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1198 951 32 0 0 chrX 80437696 80437819 -86212477 - L1_Mus1 LINE L1 -2 6565 6443 6 1198 765 156 73 59 chrX 80438613 80438817 -86211479 + Lx2 LINE L1 6785 6991 -6 6 1198 239 287 100 42 chrX 80439687 80439807 -86210489 - MER67A LTR ERV1 -402 141 15 6 1198 7357 98 8 8 chrX 80439948 80440071 -86210225 - Lx LINE L1 -7 6647 6528 6 1198 2406 104 39 44 chrX 80440071 80440484 -86209812 - RLTR10A LTR ERVK 0 411 1 6 1198 7357 98 8 8 chrX 80440484 80441389 -86208907 - Lx LINE L1 -127 6527 5619 6 1198 763 239 32 32 chrX 80441423 80441639 -86208657 + Lx9 LINE L1 7234 7449 -195 6 1198 306 0 0 0 chrX 80441640 80441674 -86208622 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1198 349 258 32 0 chrX 80441679 80441803 -86208493 + Lx9 LINE L1 7517 7644 0 6 1198 211 157 132 0 chrX 80442453 80442574 -86207722 + (CATA)n Simple_repeat Simple_repeat 3 139 0 6 1198 405 0 0 0 chrX 80442816 80442861 -86207435 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 1198 344 286 82 0 chrX 80442925 80443023 -86207273 - ID_B1 SINE B4 -38 186 81 6 1198 511 233 70 0 chrX 80443036 80443095 -86207201 - Lx9 LINE L1 -266 7378 7319 6 1198 582 15 0 0 chrX 80443095 80443162 -86207134 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1198 511 233 70 0 chrX 80443162 80443231 -86207065 - Lx9 LINE L1 -326 7318 7242 6 1198 1174 230 90 9 chrX 80444106 80444274 -86206022 + ORR1D1 LTR MaLR 1 178 -196 6 1198 423 0 0 0 chrX 80444274 80444321 -86205975 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 1198 1174 230 90 9 chrX 80444321 80444498 -86205798 + ORR1D1 LTR MaLR 179 373 -1 6 1198 268 238 45 45 chrX 80444524 80444612 -86205684 + ORR1E LTR MaLR 273 370 0 6 1198 261 159 45 0 chrX 80445235 80445279 -86205017 - ORR1A4 LTR MaLR -224 105 60 6 1198 244 25 24 48 chrX 80445312 80445354 -86204942 + (TTTG)n Simple_repeat Simple_repeat 3 43 0 6 1198 538 228 71 0 chrX 80445354 80445481 -86204815 - B1_Mur3 SINE Alu -12 137 2 6 1198 880 252 60 5 chrX 80445491 80445706 -86204590 - Lx6 LINE L1 -208 7252 7026 6 1198 831 266 150 34 chrX 80445718 80446188 -86204108 - Lx9 LINE L1 -89 7555 6888 7 1198 236 343 0 37 chrX 80446210 80446319 -86203977 - Lx8 LINE L1 -365 7108 7004 7 1198 193 318 44 22 chrX 80448365 80448455 -86201841 + L2a LINE L2 3335 3426 0 7 1198 2997 204 37 75 chrX 80449580 80450079 -86200217 + ORR1C2-int LTR MaLR 786 1264 -245 7 1198 4676 68 28 0 chrX 80450079 80450693 -86199603 - L1_Mus1 LINE L1 0 6567 5937 7 1198 2997 204 37 75 chrX 80450693 80450944 -86199352 + ORR1C2-int LTR MaLR 1265 1508 -1 7 1198 1559 175 136 3 chrX 80450946 80451284 -86199012 + ORR1C2 LTR MaLR 2 384 0 7 1198 619 242 30 18 chrX 80452387 80452555 -86197741 - MER5B DNA MER1_type -8 170 1 7 1198 21 0 0 0 chrX 80452675 80452696 -86197600 + AT_rich Low_complexity Low_complexity 1 21 0 7 1198 1158 196 13 4 chrX 80452696 80452931 -86197365 - Lx4B LINE L1 -7 7051 6815 7 1198 402 57 0 0 chrX 80454654 80454707 -86195589 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1198 1917 173 30 55 chrX 80456069 80456466 -86193830 - RLTR41 LTR ERV1 0 446 60 7 1198 438 342 40 45 chrX 80458668 80458769 -86191527 - MER45B DNA Tip100 -96 944 845 7 1198 1098 95 0 0 chrX 80458769 80458916 -86191380 + B1_Mus1 SINE Alu 1 147 -1 7 1198 438 342 40 45 chrX 80458916 80459194 -86191102 - MER45B DNA Tip100 -196 844 567 7 1198 437 351 65 42 chrX 80459440 80459657 -86190639 - MER45B DNA Tip100 -813 227 6 7 1198 342 0 0 0 chrX 80459945 80459983 -86190313 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1198 729 139 0 0 chrX 80460497 80460619 -86189677 + (GGAA)n Simple_repeat Simple_repeat 3 124 0 7 1198 288 300 19 39 chrX 80460715 80460819 -86189477 + LFSINE_Vert SINE SINE 79 180 -279 7 1198 347 308 122 49 chrX 80461177 80461341 -86188955 - MER5B DNA MER1_type 0 178 3 7 1198 351 44 0 0 chrX 80461658 80461703 -86188593 + (TC)n Simple_repeat Simple_repeat 2 46 0 7 1198 1148 56 0 0 chrX 80461703 80461847 -86188449 - B1_Mm SINE Alu -2 145 2 7 1198 1764 185 24 30 chrX 80461855 80462228 -86188068 - L1_Mur2 LINE L1 -1125 4752 4382 7 1198 447 348 62 19 chrX 80462241 80462492 -86187804 + MTE2b LTR MaLR 98 352 -27 7 1198 1882 332 77 20 chrX 80463554 80464436 -86185860 - Lx9 LINE L1 -372 7272 6341 7 1198 357 186 0 0 chrX 80464440 80464564 -86185732 + (CA)n Simple_repeat Simple_repeat 2 125 0 7 1198 1500 251 47 10 chrX 80465445 80465848 -86184448 - MTD LTR MaLR 0 419 2 7 1198 282 117 25 38 chrX 80466326 80466406 -86183890 + (TCTCTG)n Simple_repeat Simple_repeat 2 80 0 7 1198 26 0 0 0 chrX 80466861 80466887 -86183409 + AT_rich Low_complexity Low_complexity 1 26 0 7 1198 202 182 0 0 chrX 80467102 80467135 -86183161 + polypyrimidine Low_complexity Low_complexity 6 38 0 7 1198 234 0 0 0 chrX 80467735 80467761 -86182535 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 1198 486 324 0 39 chrX 80467871 80468025 -86182271 - B1_Mur1 SINE Alu 0 149 2 7 1198 286 384 40 68 chrX 80468025 80468047 -86182249 - ID_B1 SINE B4 0 224 54 7 1198 378 61 0 0 chrX 80468408 80468457 -86181839 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1198 666 328 15 5 chrX 80468766 80468971 -86181325 - B3 SINE B2 0 216 10 7 1198 2393 25 0 0 chrX 80468972 80469251 -86181045 + L1Md_A LINE L1 6303 6581 -1 7 1198 2742 127 74 1 chrX 80469873 80470560 -86179736 - Lx LINE L1 -286 6296 5491 7 1198 651 157 16 0 chrX 80470561 80470682 -86179614 + Lx LINE L1 6530 6652 -2 7 1198 1714 218 33 110 chrX 80470789 80471362 -86178934 - RLTR24 LTR ERV1 0 529 1 7 1198 474 108 0 0 chrX 80471552 80471635 -86178661 + (CCTA)n Simple_repeat Simple_repeat 4 86 0 7 1198 200 274 36 45 chrX 80471794 80471905 -86178391 + L2 LINE L2 2397 2506 -913 7 1198 659 124 48 30 chrX 80471905 80472071 -86178225 + CT-rich Low_complexity Low_complexity 2 170 0 7 1198 721 112 0 31 chrX 80472062 80472191 -86178105 + (TTTC)n Simple_repeat Simple_repeat 1 125 0 7 1198 359 349 62 19 chrX 80472697 80472954 -86177342 + Kanga2_a DNA Tc2 385 652 -236 7 1198 306 254 78 47 chrX 80474275 80474403 -86175893 - RMER13A LTR ERVK -726 134 3 7 1198 614 172 116 7 chrX 80475121 80475267 -86175029 - Lx3C LINE L1 -2 6974 6813 7 1198 335 279 11 34 chrX 80475898 80476012 -86174284 - PB1D10 SINE Alu -8 109 2 7 1198 273 329 14 0 chrX 80476018 80476091 -86174205 - ID_B1 SINE B4 -4 220 147 7 1198 1080 83 0 13 chrX 80476842 80477001 -86173295 - L1Md_F2 LINE L1 -14 6568 6412 7 1198 5044 65 2 0 chrX 80477001 80477646 -86172650 + L1_Mm LINE L1 5009 5654 -229 7 1198 22 35 0 0 chrX 80477650 80477679 -86172617 + AT_rich Low_complexity Low_complexity 1 29 0 7 1199 616 184 6 124 chrX 80478237 80478398 -86171898 + ORR1D1 LTR MaLR 1 142 -232 7 1199 204 40 0 0 chrX 80478398 80478423 -86171873 + (T)n Simple_repeat Simple_repeat 1 25 0 7 1199 5210 210 72 26 chrX 80478424 80479683 -86170613 + Lx4B LINE L1 5739 7054 -4 7 1199 355 329 199 8 chrX 80479985 80480221 -86170075 + L2 LINE L2 2485 2765 -654 7 1199 619 327 6 0 chrX 80480270 80480429 -86169867 + RSINE1 SINE B4 2 161 -4 7 1199 627 262 29 29 chrX 80480462 80480638 -86169658 + B3A SINE B2 1 163 -30 7 1199 6503 66 17 9 chrX 80480689 80481767 -86168529 - L1VL4 LINE L1 -1720 1839 753 7 1199 685 197 20 0 chrX 80481794 80481941 -86168355 - L1_Mur3 LINE L1 -1075 4805 4656 7 1199 667 244 67 5 chrX 80481973 80482183 -86168113 - RLTR15 LTR ERVK -25 334 112 7 1199 1263 191 99 53 chrX 80482385 80482727 -86167569 - MYSERV6-int LTR ERVK 0 8959 8602 7 1199 3936 109 11 0 chrX 80482730 80483287 -86167009 - L1VL4 LINE L1 -5547 755 193 7 1199 15029 66 3 6 chrX 80483971 80486677 -86163619 - L1Md_F2 LINE L1 -12 6570 3876 7 1199 495 146 239 0 chrX 80487297 80487427 -86162869 + Lx LINE L1 6491 6651 -3 7 1199 319 256 28 104 chrX 80488269 80488413 -86161883 + Lx4B LINE L1 6921 7053 -5 7 1199 229 341 143 0 chrX 80488833 80488924 -86161372 + PB1D9 SINE Alu 1 104 -16 7 1199 313 265 245 0 chrX 80488984 80489082 -86161214 + RSINE1 SINE B4 6 127 -38 7 1199 315 0 0 0 chrX 80489425 80489460 -86160836 + (TG)n Simple_repeat Simple_repeat 1 35 0 7 1199 198 0 0 0 chrX 80489460 80489481 -86160815 + (GA)n Simple_repeat Simple_repeat 1 22 0 7 1199 4808 88 22 42 chrX 80490051 80490785 -86159511 - L1_Mus2 LINE L1 0 6566 5848 7 1199 21083 99 98 20 chrX 80490786 80492886 -86157410 - L1_Mus1 LINE L1 -1 6566 4477 7 1199 3611 45 0 7 chrX 80492886 80493333 -86156963 + L1Md_F3 LINE L1 6139 6582 -2 7 1199 21083 124 181 11 chrX 80493333 80495687 -86154609 - L1_Mus1 LINE L1 -1407 4476 1455 7 1199 1030 95 0 7 chrX 80495687 80495835 -86154461 - B1_Mm SINE Alu 0 147 1 7 1199 21083 133 92 61 chrX 80495835 80496359 -86153937 - L1_Mus1 LINE L1 -4429 1454 954 7 1199 516 154 10 0 chrX 80496359 80496463 -86153833 + L1_Mus3 LINE L1 6534 6638 0 7 1199 2380 186 25 102 chrX 80496463 80496855 -86153441 - L1_Mus1 LINE L1 -5657 959 181 7 1199 472 294 1 8 chrX 80496882 80497027 -86153269 - B1F SINE Alu -2 147 3 7 1199 229 329 14 0 chrX 80497303 80497376 -86152920 - LTR16E1 LTR ERVL -224 314 241 7 1199 372 265 100 22 chrX 80498337 80498568 -86151728 - L1ME3B LINE L1 -236 6004 5756 7 1199 241 382 37 31 chrX 80498685 80498759 -86151537 + LTR33A_ LTR ERVL 80 159 -372 7 1199 1173 138 16 0 chrX 80498759 80498948 -86151348 - B2_Mm2 SINE B2 -3 192 1 7 1199 241 382 37 31 chrX 80498948 80499035 -86151261 + LTR33A_ LTR ERVL 160 241 -290 7 1199 27 62 0 0 chrX 80499486 80499534 -86150762 + AT_rich Low_complexity Low_complexity 1 48 0 7 1199 587 106 39 0 chrX 80499537 80499641 -86150655 - L1_Mus3 LINE L1 -7 6631 6524 7 1199 24 0 0 0 chrX 80499777 80499801 -86150495 + AT_rich Low_complexity Low_complexity 1 24 0 7 1199 437 326 0 22 chrX 80500329 80500467 -86149829 + ID_B1 SINE B4 87 221 -3 1 1199 342 295 26 18 chrX 80500767 80500881 -86149415 + PB1D10 SINE Alu 2 116 -1 2 1199 27 87 0 0 chrX 80502149 80502218 -86148078 + AT_rich Low_complexity Low_complexity 1 69 0 3 1199 396 312 0 9 chrX 80502318 80502428 -86147868 + PB1D10 SINE Alu 1 109 -8 4 1199 279 366 26 7 chrX 80503650 80503804 -86146492 + L2 LINE L2 2694 2850 -569 5 1199 1321 186 11 15 chrX 80504017 80504285 -86146011 + Lx3B LINE L1 6707 6973 0 6 1199 904 235 75 78 chrX 80504746 80504965 -86145331 - Lx7 LINE L1 -10 7686 7459 7 1199 342 0 0 0 chrX 80504965 80505003 -86145293 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 1199 904 235 75 78 chrX 80505003 80505207 -86145089 - Lx7 LINE L1 -238 7458 7264 7 1199 24 0 0 0 chrX 80505644 80505668 -86144628 + AT_rich Low_complexity Low_complexity 1 24 0 9 1199 483 322 48 26 chrX 80506674 80506942 -86143354 + B4A SINE B4 1 274 -18 1 1199 195 162 0 0 chrX 80507412 80507449 -86142847 + CT-rich Low_complexity Low_complexity 1 37 0 1 1199 243 254 45 0 chrX 80507449 80507516 -86142780 - PB1D10 SINE Alu -10 107 38 1 1199 327 104 0 0 chrX 80507586 80507634 -86142662 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 1199 456 51 0 0 chrX 80507727 80507786 -86142510 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 1199 224 342 13 13 chrX 80508384 80508461 -86141835 + L2a LINE L2 3327 3403 -23 1 1199 777 56 0 0 chrX 80508571 80508678 -86141618 + (TG)n Simple_repeat Simple_repeat 2 108 0 1 1199 21 0 0 0 chrX 80509193 80509214 -86141082 + AT_rich Low_complexity Low_complexity 1 21 0 1 1199 22 56 0 0 chrX 80509480 80509516 -86140780 + AT_rich Low_complexity Low_complexity 1 36 0 1 1199 230 226 19 0 chrX 80509583 80509636 -86140660 + GA-rich Low_complexity Low_complexity 3 56 0 1 1199 2273 97 62 30 chrX 80509822 80510195 -86140101 - L1_Mus3 LINE L1 -1 6637 6253 2 1199 207 65 65 0 chrX 80510280 80510326 -86139970 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 2 1199 593 306 112 0 chrX 80510361 80510567 -86139729 - ORR1D2 LTR MaLR -141 229 1 2 1199 334 306 78 0 chrX 80510625 80510831 -86139465 + L1MA7 LINE L1 6070 6291 0 2 1199 21 0 0 0 chrX 80510857 80510878 -86139418 + AT_rich Low_complexity Low_complexity 1 21 0 2 1199 240 35 0 0 chrX 80511030 80511059 -86139237 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1199 1153 0 0 0 chrX 80511080 80511216 -86139080 - L1Md_T LINE L1 -12 6570 6435 2 1199 309 247 0 0 chrX 80511536 80511617 -86138679 + (TA)n Simple_repeat Simple_repeat 1 81 0 2 1199 216 182 0 0 chrX 80512227 80512271 -86138025 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 2 1199 24 32 0 0 chrX 80512686 80512717 -86137579 + AT_rich Low_complexity Low_complexity 1 31 0 2 1199 340 244 48 24 chrX 80512740 80512824 -86137472 + MLT1A LTR MaLR 9 94 -280 3 1199 321 361 72 0 chrX 80512855 80513035 -86137261 + MLT1A LTR MaLR 163 355 -19 3 1199 261 243 0 0 chrX 80513119 80513189 -86137107 + (CA)n Simple_repeat Simple_repeat 1 70 0 3 1199 312 288 0 0 chrX 80513493 80513573 -86136723 + ID4 SINE ID 2 81 -2 3 1199 333 62 0 0 chrX 80513576 80513624 -86136672 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1199 524 86 0 11 chrX 80513712 80513806 -86136490 + L1_Mus3 LINE L1 6542 6634 -4 3 1199 876 20 0 0 chrX 80513876 80513978 -86136318 + (GA)n Simple_repeat Simple_repeat 1 102 0 3 1199 384 228 13 0 chrX 80514337 80514416 -86135880 + ID4 SINE ID 2 81 -2 3 1199 1535 76 4 13 chrX 80514769 80514997 -86135299 - L1_Mus2 LINE L1 0 6566 6341 3 1199 683 264 31 26 chrX 80515155 80515349 -86134947 - B3A SINE B2 -1 197 3 3 1199 424 374 19 5 chrX 80515361 80515573 -86134723 - ID_B1 SINE B4 -9 215 1 3 1199 2629 95 2 67 chrX 80515750 80516045 -86134251 + MTB_Mm LTR MaLR 16 288 -119 4 1199 1083 63 0 20 chrX 80516045 80516191 -86134105 - B1_Mus1 SINE Alu -3 145 3 4 1199 2629 95 2 67 chrX 80516191 80516314 -86133982 + MTB_Mm LTR MaLR 289 407 0 4 1199 571 363 20 5 chrX 80516919 80517121 -86133175 - ID_B1 SINE B4 -10 214 10 4 1199 246 314 114 6 chrX 80517604 80517780 -86132516 - Charlie5 DNA MER1_type 0 2624 2430 4 1199 440 335 80 59 chrX 80517881 80518167 -86132129 - B4A SINE B4 0 292 1 4 1199 22 0 0 0 chrX 80518184 80518206 -86132090 + AT_rich Low_complexity Low_complexity 1 22 0 4 1199 2707 90 130 73 chrX 80518395 80518886 -86131410 - MURVY-LTR LTR ERV1 0 519 1 4 1199 758 273 106 79 chrX 80518886 80519292 -86131004 + RLTR23 LTR ERV1 14 430 0 4 1199 2040 72 0 4 chrX 80519549 80519814 -86130482 + L1_Mus2 LINE L1 6302 6565 -1 4 1199 334 192 96 0 chrX 80520266 80520339 -86129957 + HAL1-3A_ME LINE L1 1939 2018 -840 4 1199 198 0 0 0 chrX 80520799 80520821 -86129475 + (TTTTC)n Simple_repeat Simple_repeat 2 23 0 5 1199 409 226 42 42 chrX 80520829 80520847 -86129449 + L1ME2 LINE L1 5773 5789 -375 5 1199 2300 84 3 89 chrX 80520847 80521227 -86129069 - L1_Mus2 LINE L1 -1 6565 6219 5 1199 3929 40 6 0 chrX 80521227 80521701 -86128595 + L1_Mus2 LINE L1 5755 6231 -335 5 1199 329 260 56 16 chrX 80521862 80521987 -86128309 - L1M2 LINE L1 -627 5673 5544 5 1199 1477 63 0 0 chrX 80522005 80522194 -86128102 - L1_Mus1 LINE L1 -1 6566 6378 5 1199 389 312 84 38 chrX 80522195 80522458 -86127838 - L1M2 LINE L1 -897 5246 4972 5 1199 21767 79 4 2 chrX 80522474 80525479 -86124817 - L1Md_F LINE L1 -1002 4881 1872 5 1199 4873 144 42 14 chrX 80525476 80526773 -86123523 - L1Md_F LINE L1 -4344 1539 214 5 1199 7055 90 11 6 chrX 80527125 80528411 -86121885 - L1_Mus1 LINE L1 -1 6566 5275 5 1199 234 156 0 0 chrX 80528703 80528748 -86121548 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 1199 468 0 0 0 chrX 80529860 80529912 -86120384 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 1199 1190 272 52 12 chrX 80531224 80531552 -86118744 - ORR1E LTR MaLR 0 359 19 5 1199 38 61 0 0 chrX 80533335 80533401 -86116895 + AT_rich Low_complexity Low_complexity 1 66 0 6 1199 297 313 124 82 chrX 80533750 80534032 -86116264 - LTR50 LTR ERVL -464 331 38 6 1199 1296 169 21 13 chrX 80535271 80535510 -86114786 - Lx3C LINE L1 -162 6814 6574 6 1199 2053 200 22 16 chrX 80535508 80535961 -86114335 - L1_Mur3 LINE L1 -573 5307 4852 6 1199 2826 35 9 9 chrX 80536008 80536357 -86113939 - L1Md_F3 LINE L1 -13 6571 6223 6 1199 4298 16 2 0 chrX 80536357 80536854 -86113442 + L1Md_F3 LINE L1 5587 6084 -500 6 1199 351 0 0 0 chrX 80537213 80537252 -86113044 + (T)n Simple_repeat Simple_repeat 1 39 0 6 1199 1117 75 0 0 chrX 80537252 80537398 -86112898 - B1_Mm SINE Alu 0 147 2 6 1199 2206 215 117 60 chrX 80537809 80538415 -86111881 - RMER20B LTR ERVK -5 622 1 6 1199 228 122 0 0 chrX 80538916 80538957 -86111339 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1199 240 314 105 105 chrX 80539000 80539267 -86111029 - LTR16A1 LTR ERVL -5 451 185 6 1199 234 307 84 131 chrX 80539586 80539777 -86110519 - B3A SINE B2 -15 183 2 7 1199 422 275 68 15 chrX 80541229 80541362 -86108934 + B1F2 SINE Alu 9 148 -1 7 1199 443 336 42 0 chrX 80541429 80541572 -86108724 + RSINE1 SINE B4 5 153 -12 7 1199 296 119 17 0 chrX 80541578 80541637 -86108659 + (CA)n Simple_repeat Simple_repeat 1 60 0 7 1199 4477 80 145 1 chrX 80542374 80543036 -86107260 - L1_Mus3 LINE L1 -6 6632 5876 7 1199 883 258 42 0 chrX 80543540 80543730 -86106566 - B3 SINE B2 -1 215 18 7 1199 599 13 0 26 chrX 80543733 80543810 -86106486 + (TTTC)n Simple_repeat Simple_repeat 3 77 0 7 1199 274 160 0 0 chrX 80543815 80543865 -86106431 - Lx2 LINE L1 -16 6981 6932 7 1199 235 322 60 17 chrX 80543896 80544013 -86106283 - MLT1H1 LTR MaLR -6 549 428 7 1199 21 36 0 0 chrX 80544190 80544218 -86106078 + AT_rich Low_complexity Low_complexity 1 28 0 7 1199 1136 102 0 22 chrX 80544773 80544953 -86105343 - Lx3_Mus LINE L1 0 7009 6834 8 1199 192 329 40 73 chrX 80545968 80546119 -86104177 + L4 LINE RTE 1607 1752 -277 8 1199 335 312 36 15 chrX 80546491 80546782 -86103514 - Charlie4a DNA MER1_type -38 470 149 8 1199 297 0 0 0 chrX 80546845 80546878 -86103418 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1199 257 314 37 37 chrX 80549371 80549480 -86100816 - MURVY-int LTR ERV1 -2540 4912 4804 8 1199 352 284 53 29 chrX 80550073 80550270 -86100026 - MURVY-int LTR ERV1 -2507 4945 4804 8 1199 868 73 0 0 chrX 80550714 80550823 -86099473 + L1_Mm LINE L1 5470 5578 -305 8 1199 355 239 16 9 chrX 80551032 80551147 -86099149 - MURVY-int LTR ERV1 -2597 4855 4783 8 1199 306 0 0 0 chrX 80559790 80559824 -86090472 + (TA)n Simple_repeat Simple_repeat 2 35 0 8 1199 1024 108 0 0 chrX 80559828 80559967 -86090329 - B1_Mus2 SINE Alu -8 139 1 8 1199 21 57 0 0 chrX 80560592 80560627 -86089669 + AT_rich Low_complexity Low_complexity 1 35 0 9 1199 230 21 85 0 chrX 80564530 80564577 -86085719 + (TTTTG)n Simple_repeat Simple_repeat 4 54 0 9 1199 2142 47 14 4 chrX 80571355 80571632 -86078664 - RLTR10B2 LTR ERVK 0 365 86 9 1199 488 118 34 76 chrX 80571633 80571752 -86078544 - RLTR10B2 LTR ERVK -166 199 86 9 1199 1326 90 4 90 chrX 80571764 80572009 -86078287 - RLTR10B2 LTR ERVK -141 224 1 9 1199 350 215 25 25 chrX 80572587 80572710 -86077586 - MURVY-int LTR ERV1 -2606 4995 4806 9 1199 333 0 0 0 chrX 80574251 80574288 -86076008 + (CA)n Simple_repeat Simple_repeat 1 37 0 9 1199 1882 219 91 21 chrX 80574290 80574775 -86075521 - RMER5 LTR ERV1 -15 519 1 9 1199 2790 56 0 3 chrX 80575212 80575571 -86074725 - L1_Mm LINE L1 -2024 3859 3502 9 1199 1861 41 0 0 chrX 80575569 80575789 -86074507 + L1Md_F2 LINE L1 5367 5586 -297 9 1199 7997 46 1 3 chrX 80575790 80576773 -86073523 + L1Md_F2 LINE L1 5588 6568 -14 9 1199 639 60 0 0 chrX 80577403 80577487 -86072809 + (TC)n Simple_repeat Simple_repeat 1 84 0 1 1199 2007 76 11 4 chrX 80577662 80577941 -86072355 - L1_Mus1 LINE L1 -1 6566 6286 1 1199 670 353 105 58 chrX 80578117 80578499 -86071797 - MLT1H LTR MaLR -147 402 3 1 1199 436 319 110 48 chrX 80579539 80579812 -86070484 - B4A SINE B4 -2 290 1 1 1199 693 256 58 29 chrX 80579950 80580155 -86070141 + B3 SINE B2 1 211 -5 1 1199 929 140 0 0 chrX 80581004 80581147 -86069149 + B1_Mus1 SINE Alu 6 148 0 1 1199 404 104 0 15 chrX 80581160 80581228 -86069068 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 1199 181 208 19 94 chrX 80581554 80581607 -86068689 - MIR SINE MIR -89 173 125 1 1199 289 339 57 26 chrX 80583265 80583459 -86066837 + L1ME3A LINE L1 5947 6146 -27 1 1199 189 0 0 0 chrX 80583866 80583887 -86066409 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1199 953 98 0 7 chrX 80584281 80584425 -86065871 + (TTTC)n Simple_repeat Simple_repeat 2 144 0 1 1199 564 80 0 0 chrX 80584558 80584646 -86065650 - L1_Mus2 LINE L1 0 6566 6479 1 1199 26 0 0 0 chrX 80586024 80586050 -86064246 + AT_rich Low_complexity Low_complexity 1 26 0 1 1199 22268 52 2 3 chrX 80586076 80589612 -86060684 - L1Md_F2 LINE L1 -12 6570 3042 1 1199 21 36 0 0 chrX 80589711 80589739 -86060557 + AT_rich Low_complexity Low_complexity 1 28 0 1 1199 230 373 0 12 chrX 80590723 80590807 -86059489 + MIRb SINE MIR 13 95 -173 1 1199 533 248 0 0 chrX 80591086 80591191 -86059105 + 5S rRNA rRNA 8 112 -9 1 1199 239 186 23 0 chrX 80591188 80591231 -86059065 + 5S rRNA rRNA 77 120 -1 1 1199 180 351 0 0 chrX 80591707 80591818 -86058478 + CT-rich Low_complexity Low_complexity 10 120 0 1 1199 625 228 12 0 chrX 80591826 80591993 -86058303 + C-rich Low_complexity Low_complexity 3 171 0 1 1199 357 24 0 0 chrX 80591993 80592035 -86058261 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 1 1199 325 300 194 21 chrX 80592096 80592338 -86057958 - B4A SINE B4 -6 286 3 1 1199 22 35 0 0 chrX 80593532 80593561 -86056735 + AT_rich Low_complexity Low_complexity 1 29 0 1 1199 363 213 28 0 chrX 80593561 80593669 -86056627 - Lx9 LINE L1 -10 7634 7524 1 1199 315 0 0 0 chrX 80593672 80593707 -86056589 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 1199 476 341 103 10 chrX 80594683 80594887 -86055409 - MIR SINE MIR -25 237 15 1 1199 260 330 19 10 chrX 80595056 80595160 -86055136 + PB1D10 SINE Alu 1 105 -12 1 1199 471 63 0 0 chrX 80595162 80595225 -86055071 + (TAA)n Simple_repeat Simple_repeat 2 64 0 1 1199 608 303 100 56 chrX 80595492 80596010 -86054286 - Lx8 LINE L1 -5 7468 6928 1 1199 246 62 0 0 chrX 80596043 80596075 -86054221 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1 1199 21 36 0 0 chrX 80596105 80596133 -86054163 + AT_rich Low_complexity Low_complexity 1 28 0 1 1199 365 136 15 0 chrX 80597913 80597979 -86052317 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1199 26 82 0 0 chrX 80598506 80598567 -86051729 + AT_rich Low_complexity Low_complexity 1 61 0 1 1199 2328 103 0 3 chrX 80599720 80600050 -86050246 - L1_Mus2 LINE L1 0 6566 6238 1 1199 4933 53 24 3 chrX 80600050 80600679 -86049617 + L1_Mus2 LINE L1 5634 6275 -291 1 1199 21 0 0 0 chrX 80600715 80600736 -86049560 + AT_rich Low_complexity Low_complexity 1 21 0 1 1199 384 22 0 0 chrX 80600855 80600900 -86049396 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 1199 2202 88 164 3 chrX 80600904 80601246 -86049050 - MTB LTR MaLR -3 397 1 1 1199 342 369 19 0 chrX 80601262 80601422 -86048874 - Lx8 LINE L1 -248 7396 7163 1 1199 538 10 81 0 chrX 80601984 80602083 -86048213 + (TG)n Simple_repeat Simple_repeat 2 108 0 1 1199 2053 298 136 17 chrX 80602296 80603100 -86047196 - Lx8 LINE L1 -363 7110 6202 1 1199 1141 76 0 0 chrX 80603100 80603245 -86047051 - B1_Mus2 SINE Alu -1 146 2 1 1199 3012 36 0 0 chrX 80603255 80603617 -86046679 - L1Md_T LINE L1 -1 6581 6220 1 1199 2053 298 136 17 chrX 80603617 80603679 -86046617 - Lx8 LINE L1 -1277 6196 6129 1 1199 5177 65 0 6 chrX 80604379 80605046 -86045250 - L1Md_F2 LINE L1 -14 6568 5906 1 1199 3065 61 0 0 chrX 80605046 80605425 -86044871 + L1Md_F2 LINE L1 5505 5883 0 1 1199 1358 215 90 3 chrX 80605692 80605991 -86044305 - ORR1B1 LTR MaLR 0 394 70 1 1199 287 297 51 51 chrX 80605981 80606059 -86044237 + RSINE1 SINE B4 75 152 -13 1 1199 23 68 0 0 chrX 80606089 80606133 -86044163 + AT_rich Low_complexity Low_complexity 1 44 0 1 1199 234 91 0 0 chrX 80606158 80606191 -86044105 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 1 149 15499 146 18 5 chrX 80606677 80610216 -86040080 - L1_Mus4 LINE L1 -3 6633 3044 1 1200 9295 54 1 0 chrX 80610217 80612105 -86038191 - L1Md_F2 LINE L1 -2 6580 4691 1 1200 931 116 0 0 chrX 80612109 80612247 -86038049 - MusHAL1 LINE L1 -877 1835 1698 1 1200 5557 109 24 4 chrX 80612254 80613159 -86037137 - MusHAL1 LINE L1 -1606 1106 184 1 1200 288 0 0 0 chrX 80613170 80613202 -86037094 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 1200 306 0 0 0 chrX 80613202 80613235 -86037061 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1200 3413 278 101 63 chrX 80613348 80614662 -86035634 - Lx6 LINE L1 -20 7440 6078 1 1200 2010 214 9 33 chrX 80615496 80615916 -86034380 - MTD LTR MaLR 0 419 10 1 1200 26 50 0 0 chrX 80615945 80615985 -86034311 + AT_rich Low_complexity Low_complexity 1 40 0 1 1200 1065 83 7 14 chrX 80615993 80616140 -86034156 - B1_Mus1 SINE Alu 0 148 3 1 1200 201 154 0 0 chrX 80616233 80616272 -86034024 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1200 23 33 0 0 chrX 80616352 80616382 -86033914 + AT_rich Low_complexity Low_complexity 1 30 0 1 1200 462 286 148 32 chrX 80617567 80617878 -86032418 + Lx8 LINE L1 7121 7467 -6 1 1200 280 226 10 106 chrX 80618315 80618419 -86031877 - ORR1D1 LTR MaLR -115 259 166 1 1200 550 177 22 11 chrX 80618419 80618597 -86031699 + GA-rich Low_complexity Low_complexity 1 180 0 1 1200 724 219 5 87 chrX 80618598 80618793 -86031503 - ORR1D1 LTR MaLR -195 179 1 1 1200 21 0 0 0 chrX 80618830 80618851 -86031445 + AT_rich Low_complexity Low_complexity 1 21 0 1 1200 26 64 0 0 chrX 80618962 80619009 -86031287 + AT_rich Low_complexity Low_complexity 1 47 0 1 1200 576 348 31 31 chrX 80619104 80619561 -86030735 - L1MA6 LINE L1 -114 6186 5730 1 1200 25 90 0 0 chrX 80620327 80620394 -86029902 + AT_rich Low_complexity Low_complexity 1 67 0 1 1200 21 36 0 0 chrX 80621074 80621102 -86029194 + AT_rich Low_complexity Low_complexity 1 28 0 1 1200 2330 121 69 5 chrX 80621110 80621485 -86028811 - Lx3B LINE L1 -3 6970 6572 1 1200 719 85 94 0 chrX 80621485 80621591 -86028705 + Lx3C LINE L1 6461 6576 -400 1 1200 297 0 0 0 chrX 80621656 80621689 -86028607 + (T)n Simple_repeat Simple_repeat 1 33 0 1 1200 2236 206 2 5 chrX 80625365 80625785 -86024511 - MTC LTR MaLR -2 419 1 1 1200 237 289 74 0 chrX 80626001 80626136 -86024160 - Lx9 LINE L1 -22 7622 7478 1 1200 262 306 133 0 chrX 80626849 80626947 -86023349 - PB1D10 SINE Alu -2 115 5 1 1200 180 0 0 0 chrX 80627644 80627664 -86022632 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1200 369 0 0 0 chrX 80627664 80627704 -86022592 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1200 315 49 0 0 chrX 80630134 80630175 -86020121 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1 1200 610 347 0 20 chrX 80630269 80630466 -86019830 - B3A SINE B2 -1 197 5 1 1200 300 206 62 0 chrX 80630792 80630889 -86019407 - Lx9 LINE L1 0 7644 7542 1 1200 1020 248 3 75 chrX 80630892 80631210 -86019086 + Lx9 LINE L1 7234 7528 -116 1 1200 393 289 22 0 chrX 80631777 80631867 -86018429 + B3A SINE B2 13 104 -94 1 1200 2549 80 0 17 chrX 80632183 80632538 -86017758 - L1Md_F2 LINE L1 0 6582 6234 1 1200 9818 77 16 0 chrX 80632538 80633842 -86016454 - L1_Mm LINE L1 -101 5782 4458 1 1200 419 35 18 0 chrX 80634726 80634783 -86015513 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 1200 411 179 0 0 chrX 80636757 80636824 -86013472 + RMER4B LTR ERVK 77 143 -442 1 1200 1552 56 0 0 chrX 80638628 80638823 -86011473 + L1Md_T LINE L1 6387 6581 -1 1 1200 357 169 0 0 chrX 80639735 80639818 -86010478 + GA-rich Low_complexity Low_complexity 2 84 0 1 1200 320 318 64 57 chrX 80639845 80640002 -86010294 + HAL1-3A_ME LINE L1 2282 2439 -419 1 1200 584 195 24 0 chrX 80640008 80640177 -86010119 + GA-rich Low_complexity Low_complexity 1 173 0 1 1200 361 295 76 57 chrX 80640202 80640360 -86009936 + HAL1-3A_ME LINE L1 2284 2444 -414 1 1200 583 194 26 7 chrX 80640360 80640787 -86009509 + GA-rich Low_complexity Low_complexity 1 435 0 1 1200 447 178 15 7 chrX 80640801 80640937 -86009359 + GA-rich Low_complexity Low_complexity 1 137 0 1 1200 330 384 33 7 chrX 80640938 80641090 -86009206 + HAL1-3A_ME LINE L1 2284 2439 -419 1 1200 803 165 25 9 chrX 80641092 80641419 -86008877 + GA-rich Low_complexity Low_complexity 1 332 0 1 1200 449 199 35 6 chrX 80641471 80641643 -86008653 + GA-rich Low_complexity Low_complexity 2 178 0 1 1200 500 185 17 50 chrX 80641692 80642108 -86008188 + GA-rich Low_complexity Low_complexity 1 402 0 1 1200 300 349 32 57 chrX 80642108 80642266 -86008030 + HAL1-3A_ME LINE L1 2284 2437 -421 1 1200 484 202 27 17 chrX 80642267 80642566 -86007730 + GA-rich Low_complexity Low_complexity 1 302 0 1 1200 432 229 12 15 chrX 80642595 80642892 -86007404 + GA-rich Low_complexity Low_complexity 1 296 0 1 1200 1241 27 0 0 chrX 80643583 80643729 -86006567 + B1_Mm SINE Alu 2 147 0 1 1200 225 0 0 0 chrX 80643729 80643754 -86006542 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1200 189 45 42 62 chrX 80646907 80646955 -86003341 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1 1200 1193 48 0 0 chrX 80646957 80647103 -86003193 - B1_Mus2 SINE Alu 0 147 2 1 1200 1125 56 0 0 chrX 80647614 80647756 -86002540 - L1_Mus3 LINE L1 -179 6459 6318 1 1200 474 54 14 0 chrX 80647757 80647831 -86002465 + L1_Mus3 LINE L1 6559 6633 -5 1 1200 231 61 0 0 chrX 80648048 80648081 -86002215 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 1 1200 1998 157 13 25 chrX 80649268 80649661 -86000635 + Lx2B LINE L1 6604 6991 -9 1 1200 1172 192 29 157 chrX 80651171 80651477 -85998819 + ORR1B1 LTR MaLR 1 248 -81 1 1200 1593 37 0 0 chrX 80651477 80651664 -85998632 - B2_Mm1t SINE B2 -6 187 1 1 1200 1172 192 29 157 chrX 80651664 80651734 -85998562 + ORR1B1 LTR MaLR 249 328 -1 1 1200 5381 212 83 85 chrX 80651734 80653702 -85996594 + ORR1B1-int LTR MaLR 1 1963 0 1 1200 1316 216 71 106 chrX 80653709 80654076 -85996220 + ORR1B1 LTR MaLR 41 394 0 1 1200 1665 169 51 6 chrX 80656634 80656949 -85993347 - ORR1A4 LTR MaLR 0 329 1 2 1200 236 208 0 0 chrX 80658511 80658559 -85991737 + T-rich Low_complexity Low_complexity 1 48 0 2 1200 719 120 13 47 chrX 80658930 80659079 -85991217 - Lx LINE L1 0 6654 6511 2 1200 3024 111 0 17 chrX 80659496 80659905 -85990391 + L1_Mus4 LINE L1 6184 6591 -45 2 1200 3173 53 6 98 chrX 80659905 80660385 -85989911 - RLTR10C LTR ERVK 0 436 1 2 1200 3024 111 0 17 chrX 80660385 80660434 -85989862 + L1_Mus4 LINE L1 6592 6634 -2 2 1200 218 175 0 0 chrX 80663342 80663382 -85986914 + CT-rich Low_complexity Low_complexity 2 41 0 2 1200 310 206 0 45 chrX 80663386 80663452 -85986844 - B1_Mm SINE Alu -5 142 80 2 1200 665 0 25 0 chrX 80665947 80666027 -85984269 + (TTTC)n Simple_repeat Simple_repeat 2 83 0 2 1200 4539 80 24 11 chrX 80666142 80666772 -85983524 - L1_Mus2 LINE L1 0 6566 5929 2 1200 2374 111 0 0 chrX 80666772 80667122 -85983174 - L1_Mur1 LINE L1 -842 5044 4695 2 1200 874 232 16 93 chrX 80667112 80667425 -85982871 - L1_Mur1 LINE L1 -6693 289 1 2 1200 212 0 36 0 chrX 80671836 80671864 -85978432 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1200 1144 76 7 0 chrX 80671874 80672019 -85978277 - B1_Mus1 SINE Alu -2 146 1 2 1200 2856 73 5 0 chrX 80673834 80674218 -85976078 + MTA_Mm LTR MaLR 1 386 -10 2 1200 23 0 0 0 chrX 80674904 80674927 -85975369 + AT_rich Low_complexity Low_complexity 1 23 0 2 1200 237 211 0 0 chrX 80675581 80675633 -85974663 + GA-rich Low_complexity Low_complexity 3 54 0 2 1200 384 288 27 0 chrX 80675721 80675832 -85974464 - RLTR42-int LTR ERVK -3740 1782 1669 2 1200 288 0 0 0 chrX 80676749 80676781 -85973515 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 2 1200 397 246 156 21 chrX 80679734 80679875 -85970421 + MTD-int LTR MaLR 1099 1258 0 2 1200 1152 231 106 32 chrX 80679875 80680157 -85970139 + MTD LTR MaLR 1 303 -116 2 1200 417 39 0 0 chrX 80680158 80680209 -85970087 + (TC)n Simple_repeat Simple_repeat 1 51 0 2 1200 396 0 0 0 chrX 80680209 80680252 -85970044 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1200 493 71 0 0 chrX 80683190 80683260 -85967036 + L1_Mus2 LINE L1 6487 6556 -10 2 1200 441 0 0 0 chrX 80683262 80683311 -85966985 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 1200 265 338 49 71 chrX 80688351 80688577 -85961719 - RMER12 LTR ERVK 0 1322 1102 2 1200 5767 68 17 1 chrX 80688824 80689628 -85960668 - RLTR22_Mus LTR ERVK -991 817 1 2 1200 270 0 0 0 chrX 80690790 80690820 -85959476 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 1200 444 19 0 0 chrX 80691292 80691345 -85958951 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 1200 333 47 0 0 chrX 80694212 80694255 -85956041 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1200 597 135 0 0 chrX 80694255 80694381 -85955915 + (GA)n Simple_repeat Simple_repeat 1 126 0 2 1200 240 184 0 0 chrX 80696024 80696073 -85954223 + GA-rich Low_complexity Low_complexity 2 50 0 2 1200 316 314 24 8 chrX 80696115 80696240 -85954056 - RLTR42-int LTR ERVK -3727 1795 1669 2 1200 373 302 17 17 chrX 80697575 80697747 -85952549 - RLTR42-int LTR ERVK -1097 4425 4254 2 1200 415 280 23 23 chrX 80698135 80698307 -85951989 - RLTR42-int LTR ERVK -1097 4425 4254 2 1200 526 380 21 3 chrX 80699472 80699799 -85950497 - Lx8 LINE L1 -157 7316 6984 2 1200 3668 30 2 0 chrX 80700471 80700904 -85949392 + L1Md_T LINE L1 6147 6580 -2 2 1200 2078 67 0 18 chrX 80701645 80701919 -85948377 + L1_Mus1 LINE L1 6298 6566 -1 2 1200 483 270 16 0 chrX 80702993 80703119 -85947177 - RLTR42-int LTR ERVK -3726 1796 1669 2 1200 2337 84 0 3 chrX 80703235 80703556 -85946740 + L1_Mus2 LINE L1 6242 6561 -5 2 1200 559 337 31 12 chrX 80705592 80705850 -85944446 - Lx8 LINE L1 -156 7317 7055 2 1200 282 316 11 0 chrX 80707811 80707906 -85942390 - RLTR42-int LTR ERVK -3726 1796 1701 2 1200 240 59 0 0 chrX 80708446 80708480 -85941816 + (A)n Simple_repeat Simple_repeat 1 34 0 2 1200 411 21 0 0 chrX 80709958 80710006 -85940290 + (TTTTTG)n Simple_repeat Simple_repeat 3 50 0 2 1200 542 367 32 3 chrX 80710134 80710448 -85939848 - Lx8 LINE L1 -161 7312 6990 2 1200 315 305 8 22 chrX 80710455 80710589 -85939707 + L1_Rod LINE L1 5072 5203 -644 2 1200 563 151 8 0 chrX 80712223 80712349 -85937947 + GA-rich Low_complexity Low_complexity 1 127 0 2 1200 417 314 17 22 chrX 80713887 80714066 -85936230 - RLTR42-int LTR ERVK -1095 4427 4250 2 1200 21 0 0 0 chrX 80714611 80714632 -85935664 + AT_rich Low_complexity Low_complexity 1 21 0 2 1200 423 363 45 19 chrX 80714766 80715075 -85935221 - Lx8 LINE L1 -157 7316 7000 2 1200 29 0 0 0 chrX 80717065 80717094 -85933202 + AT_rich Low_complexity Low_complexity 1 29 0 2 1200 381 369 30 17 chrX 80719189 80719487 -85930809 - Lx8 LINE L1 -157 7316 7015 2 1200 534 16 0 0 chrX 80720337 80720400 -85929896 + (TA)n Simple_repeat Simple_repeat 1 63 0 2 1200 606 28 0 0 chrX 80720836 80720908 -85929388 + (GA)n Simple_repeat Simple_repeat 1 72 0 2 1200 407 298 8 16 chrX 80720965 80721088 -85929208 - RLTR42-int LTR ERVK -3732 1790 1669 2 1200 203 79 26 0 chrX 80721188 80721226 -85929070 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1200 1159 137 11 0 chrX 80721991 80722181 -85928115 + L1_Mus1 LINE L1 6375 6566 -1 2 1200 368 223 86 35 chrX 80722675 80722791 -85927505 - RLTR42-int LTR ERVK -1146 4376 4255 2 1200 262 329 24 0 chrX 80723484 80723569 -85926727 - Lx8 LINE L1 -200 7273 7187 2 1200 388 315 101 14 chrX 80724445 80724593 -85925703 - MER83B-int LTR ERV1 -3462 1418 1258 2 1200 706 81 9 9 chrX 80725491 80725603 -85924693 + (TTCC)n Simple_repeat Simple_repeat 3 114 0 2 1200 265 43 65 0 chrX 80726938 80726984 -85923312 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 2 1200 788 323 4 8 chrX 80727387 80727643 -85922653 + Lx8 LINE L1 6966 7220 -253 2 1200 917 219 339 22 chrX 80727643 80727953 -85922343 + MTC LTR MaLR 1 408 -13 2 1200 205 294 24 48 chrX 80729652 80729820 -85920476 + CT-rich Low_complexity Low_complexity 2 165 0 2 1200 246 331 18 24 chrX 80730731 80730898 -85919398 + CT-rich Low_complexity Low_complexity 2 167 0 2 1200 302 280 16 33 chrX 80731105 80731227 -85919069 + CT-rich Low_complexity Low_complexity 4 123 0 2 1200 264 328 16 0 chrX 80731476 80731598 -85918698 + CT-rich Low_complexity Low_complexity 4 127 0 2 1200 375 302 0 0 chrX 80732339 80732518 -85917778 + (CTG)n Simple_repeat Simple_repeat 1 179 0 2 1200 329 316 112 31 chrX 80733621 80733817 -85916479 + L1_Rod LINE L1 17 228 -6944 2 1200 307 260 0 27 chrX 80734276 80734351 -85915945 - Lx8 LINE L1 -354 7119 7047 2 1200 25 31 0 0 chrX 80734490 80734522 -85915774 + AT_rich Low_complexity Low_complexity 1 32 0 2 1200 1315 250 13 72 chrX 80734652 80735027 -85915269 - ORR1C2 LTR MaLR -5 379 27 2 1200 378 143 0 0 chrX 80735681 80735758 -85914538 + (CA)n Simple_repeat Simple_repeat 2 78 0 2 1200 497 38 50 0 chrX 80736837 80736917 -85913379 + (GA)n Simple_repeat Simple_repeat 1 84 0 2 1200 396 276 10 0 chrX 80737004 80737102 -85913194 - RLTR42-int LTR ERVK -3727 1795 1697 2 1200 440 343 36 20 chrX 80738742 80738995 -85911301 - Lx8 LINE L1 -157 7316 7060 2 1201 301 256 24 64 chrX 80741920 80742045 -85908251 - RLTR42-int LTR ERVK -1146 4376 4257 2 1201 269 311 22 0 chrX 80742732 80742822 -85907474 - Lx8 LINE L1 -195 7278 7187 2 1201 535 354 37 10 chrX 80745001 80745295 -85905001 - Lx8 LINE L1 -157 7316 7015 2 1201 474 18 0 0 chrX 80747649 80747704 -85902592 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 1201 535 354 37 10 chrX 80748417 80748711 -85901585 - Lx8 LINE L1 -157 7316 7015 2 1201 459 0 0 0 chrX 80751065 80751116 -85899180 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 1201 507 361 37 10 chrX 80751829 80752123 -85898173 - Lx8 LINE L1 -157 7316 7015 2 1201 576 0 0 0 chrX 80754485 80754549 -85895747 + (TA)n Simple_repeat Simple_repeat 2 65 0 2 1201 438 289 25 0 chrX 80755246 80755367 -85894929 - Lx8 LINE L1 -157 7316 7193 2 1201 351 0 0 0 chrX 80757897 80757936 -85892360 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 1201 534 348 41 14 chrX 80758653 80758947 -85891349 - Lx8 LINE L1 -157 7316 7015 2 1201 320 361 58 34 chrX 80762034 80762329 -85887967 - Lx8 LINE L1 -157 7316 7015 2 1201 4067 98 2 7 chrX 80763694 80764277 -85886019 - L1Md_F2 LINE L1 -12 6570 5991 2 1201 2686 18 2 251 chrX 80764594 80765113 -85885183 - RLTR10 LTR ERVK 0 390 1 2 1201 818 257 58 65 chrX 80765201 80765509 -85884787 - RMER10A LTR ERVL -136 306 1 2 1201 1584 328 34 29 chrX 80765509 80766092 -85884204 - ORR1D-int LTR MaLR -199 1171 586 2 1201 306 0 0 0 chrX 80766509 80766543 -85883753 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1201 22 35 0 0 chrX 80767164 80767193 -85883103 + AT_rich Low_complexity Low_complexity 1 29 0 2 1201 5981 3 0 0 chrX 80768934 80769597 -85880699 + L1Md_A LINE L1 5919 6581 -1 2 1201 3554 185 33 37 chrX 80769775 80770634 -85879662 - RLTR13A LTR ERVK 0 855 1 2 1201 273 57 0 0 chrX 80770772 80770807 -85879489 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 2 1201 23 33 0 0 chrX 80771167 80771197 -85879099 + AT_rich Low_complexity Low_complexity 1 30 0 2 1201 25 31 0 0 chrX 80771385 80771417 -85878879 + AT_rich Low_complexity Low_complexity 1 32 0 2 1201 22 0 0 0 chrX 80771430 80771452 -85878844 + AT_rich Low_complexity Low_complexity 1 22 0 2 1201 7321 107 16 13 chrX 80772825 80774530 -85875766 - L1VL2 LINE L1 -632 2983 812 2 1201 3138 110 34 0 chrX 80774542 80775013 -85875283 - L1_Mus2 LINE L1 0 6566 6080 3 1201 753 121 43 8 chrX 80775015 80775132 -85875164 - L1VL2 LINE L1 -6043 292 172 2 1201 591 299 18 18 chrX 80775783 80775950 -85874346 - MTE-int LTR MaLR -3 1577 1411 3 1201 6210 196 54 18 chrX 80776097 80777216 -85873080 - Lx5 LINE L1 -140 6910 5750 3 1201 5062 53 0 0 chrX 80777216 80777843 -85872453 - L1Md_F2 LINE L1 -2 6580 5954 3 1201 6431 181 33 21 chrX 80777843 80779025 -85871271 - L1_Mur2 LINE L1 -134 5743 4558 3 1201 21 57 0 0 chrX 80779465 80779500 -85870796 + AT_rich Low_complexity Low_complexity 1 35 0 3 1201 191 36 36 0 chrX 80780545 80780573 -85869723 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 1201 1019 130 0 7 chrX 80780575 80780722 -85869574 - B1_Mus1 SINE Alu -1 147 2 3 1201 371 248 29 0 chrX 80780932 80781037 -85869259 + L1MA6 LINE L1 6193 6300 0 3 1201 247 350 128 83 chrX 80781156 80781312 -85868984 + B4A SINE B4 3 165 -127 3 1201 988 0 0 0 chrX 80781369 80781476 -85868820 + U6 snRNA snRNA 1 107 0 3 1201 24371 20 0 0 chrX 80781476 80784321 -85865975 + L1Md_T LINE L1 2742 5586 -297 3 1201 8012 56 0 0 chrX 80784321 80785340 -85864956 + L1Md_T LINE L1 5587 6582 0 3 1201 1515 20 0 61 chrX 80785340 80785586 -85864710 + L1Md_F2 LINE L1 6382 6582 0 3 1201 495 222 0 0 chrX 80785994 80786111 -85864185 + (TATG)n Simple_repeat Simple_repeat 2 118 0 3 1201 301 336 111 8 chrX 80786704 80786830 -85863466 - Lx8 LINE L1 -148 7325 7187 3 1201 194 289 22 67 chrX 80787350 80787439 -85862857 - L4 LINE RTE -296 1733 1649 3 1201 1118 298 31 47 chrX 80788029 80788393 -85861903 - Lx8 LINE L1 -1 7472 7115 3 1201 4611 123 37 25 chrX 80788393 80789151 -85861145 - L1_Mus4 LINE L1 -2 6634 5868 3 1201 1118 298 31 47 chrX 80789151 80789276 -85861020 - Lx8 LINE L1 -359 7114 6991 3 1201 315 0 0 0 chrX 80789587 80789622 -85860674 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1201 3255 102 4 42 chrX 80789885 80790386 -85859910 - L1Md_F2 LINE L1 -1 6581 6100 3 1201 3208 54 0 7 chrX 80790562 80790975 -85859321 - L1Md_F2 LINE L1 0 6582 6173 3 1201 402 21 0 0 chrX 80790976 80791023 -85859273 + L1Md_F2 LINE L1 6130 6176 -406 3 1201 8234 52 0 0 chrX 80791022 80792610 -85857686 - L1Md_F3 LINE L1 -9 6575 4987 3 1201 7267 45 3 5 chrX 80792608 80793506 -85856790 - L1Md_F2 LINE L1 -12 6570 5674 3 1201 15908 66 1 1 chrX 80793504 80795602 -85854694 - L1Md_F3 LINE L1 -917 4966 2871 3 1201 27651 29 0 0 chrX 80795619 80799611 -85850685 - L1Md_T LINE L1 0 6582 2589 3 1201 237 337 0 0 chrX 80799612 80799704 -85850592 - Lx9 LINE L1 -502 7142 7051 3 1201 667 96 0 0 chrX 80799715 80799809 -85850487 - Lx LINE L1 -148 6506 6413 3 1201 498 311 60 30 chrX 80800007 80800055 -85850241 - Lx9 LINE L1 -598 7046 6995 3 1201 201 39 0 0 chrX 80800055 80800081 -85850215 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 3 1201 498 311 60 30 chrX 80800081 80800300 -85849996 - Lx9 LINE L1 -650 6994 6771 3 1201 21 36 0 0 chrX 80800322 80800350 -85849946 + AT_rich Low_complexity Low_complexity 1 28 0 3 1201 282 56 0 0 chrX 80802017 80802053 -85848243 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1201 1309 257 75 6 chrX 80802243 80802603 -85847693 - Lx9 LINE L1 -805 6839 6455 3 1201 31 68 0 0 chrX 80802977 80803036 -85847260 + AT_rich Low_complexity Low_complexity 1 59 0 3 1201 290 268 12 0 chrX 80803671 80803753 -85846543 + L1MB3 LINE L1 4257 4339 -1801 3 1201 382 355 8 8 chrX 80803777 80803902 -85846394 + ID_B1 SINE B4 92 216 -8 3 1201 2213 303 96 65 chrX 80804084 80804783 -85845513 + RMER1C Other Other 22 750 -592 3 1201 369 43 0 0 chrX 80804783 80804830 -85845466 + (TGG)n Simple_repeat Simple_repeat 3 49 0 3 1201 2213 303 96 65 chrX 80804830 80805397 -85844899 + RMER1C Other Other 751 1328 -14 3 1201 237 321 80 36 chrX 80805442 80805743 -85844553 + L1MB3 LINE L1 4376 4693 -1453 3 1201 22 35 0 0 chrX 80806017 80806046 -85844250 + AT_rich Low_complexity Low_complexity 1 29 0 3 1201 311 259 44 61 chrX 80806046 80806413 -85843883 + L1MB3 LINE L1 5136 5488 -695 3 1201 510 152 0 0 chrX 80806413 80806505 -85843791 + GA-rich Low_complexity Low_complexity 1 92 0 3 1201 490 288 29 0 chrX 80806673 80806843 -85843453 + L1MB3 LINE L1 5715 5889 -294 3 1201 5352 124 25 9 chrX 80807028 80807890 -85842406 - Lx LINE L1 -5 6649 5774 3 1201 784 181 8 1 chrX 80807890 80808044 -85842252 + Lx LINE L1 5654 5841 -353 3 1201 245 234 26 13 chrX 80808013 80808091 -85842205 + L1MB3 LINE L1 6098 6176 -4 3 1201 26 0 0 0 chrX 80809168 80809194 -85841102 + AT_rich Low_complexity Low_complexity 1 26 0 3 1201 252 314 0 110 chrX 80809741 80809877 -85840419 - ORR1E LTR MaLR -234 125 5 3 1201 1695 126 4 0 chrX 80810738 80811000 -85839296 - L1_Mus4 LINE L1 -7 6629 6367 3 1201 2548 137 9 30 chrX 80811397 80811512 -85838784 - L1_Mm LINE L1 -195 5688 5586 3 1201 870 189 299 21 chrX 80811512 80811793 -85838503 - RLTR10D LTR ERVK 0 359 1 3 1201 2548 137 9 30 chrX 80811793 80812115 -85838181 - L1_Mm LINE L1 -298 5585 5260 3 1201 5913 109 22 13 chrX 80812104 80813015 -85837281 + L1_Mus3 LINE L1 5708 6626 -12 3 1201 25 0 0 0 chrX 80815302 80815327 -85834969 + AT_rich Low_complexity Low_complexity 1 25 0 3 1201 1777 192 63 8 chrX 80815966 80816329 -85833967 - ORR1B1 LTR MaLR -11 383 1 3 1201 274 250 54 27 chrX 80816562 80816636 -85833660 + RSINE1 SINE B4 46 121 -44 3 1201 392 263 10 0 chrX 80817024 80817123 -85833173 + PB1D10 SINE Alu 4 103 -14 3 1201 207 0 0 0 chrX 80817141 80817164 -85833132 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3 1201 420 292 0 59 chrX 80817844 80817978 -85832318 - MTEa LTR MaLR 0 379 250 3 1201 1347 72 0 0 chrX 80817978 80818158 -85832138 + (GA)n Simple_repeat Simple_repeat 1 180 0 3 1201 420 328 99 78 chrX 80818158 80818344 -85831952 - MTEa LTR MaLR -130 249 4 3 1201 319 324 26 26 chrX 80818956 80819070 -85831226 - PB1D9 SINE Alu -1 119 6 3 1201 2136 112 19 0 chrX 80820526 80820839 -85829457 - ORR1A2 LTR MaLR -8 319 1 3 1201 5263 151 22 29 chrX 80820839 80821792 -85828504 - ORR1A2-int LTR MaLR 0 1963 366 3 1201 912 149 71 6 chrX 80821792 80821974 -85828322 - Lx2 LINE L1 0 6997 6804 3 1201 2608 234 68 65 chrX 80821974 80822343 -85827953 - ORR1A2-int LTR MaLR -893 365 1 3 1201 1859 126 83 0 chrX 80822343 80822645 -85827651 - ORR1A2 LTR MaLR 0 327 1 3 1201 264 198 55 28 chrX 80822756 80822865 -85827431 + (TATATG)n Simple_repeat Simple_repeat 3 114 0 3 1201 279 0 0 0 chrX 80823613 80823644 -85826652 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1201 341 306 47 39 chrX 80823654 80823783 -85826513 - RMER15 LTR ERVL -96 479 350 3 1201 1116 285 113 38 chrX 80824334 80824910 -85825386 + Lx8 LINE L1 6827 7445 -28 3 1201 3304 251 52 28 chrX 80824959 80826080 -85824216 - L1_Mur3 LINE L1 -6779 933 11 3 1201 7192 64 0 0 chrX 80827011 80827913 -85822383 - L1_Mus1 LINE L1 0 6567 5666 3 1201 371 290 73 44 chrX 80827918 80828055 -85822241 - RMER15 LTR ERVL -14 561 421 3 1201 333 68 0 0 chrX 80828065 80828109 -85822187 + (TC)n Simple_repeat Simple_repeat 2 45 0 3 1201 273 29 0 0 chrX 80828109 80828143 -85822153 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1201 461 345 52 9 chrX 80828218 80828402 -85821894 + B3A SINE B2 16 210 -6 3 1201 481 163 8 15 chrX 80828448 80828579 -85821717 + (TAGA)n Simple_repeat Simple_repeat 3 132 0 3 1201 621 149 37 14 chrX 80828579 80828802 -85821494 + (CAGA)n Simple_repeat Simple_repeat 1 228 0 3 1201 559 176 17 22 chrX 80828858 80829038 -85821258 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 3 1201 576 209 0 0 chrX 80829077 80829254 -85821042 + (CAGA)n Simple_repeat Simple_repeat 4 180 0 3 1201 471 181 11 33 chrX 80829273 80829456 -85820840 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 3 1201 373 198 8 8 chrX 80829517 80829634 -85820662 + (CAGA)n Simple_repeat Simple_repeat 2 118 0 3 1201 577 200 17 0 chrX 80829659 80829834 -85820462 + (CAGA)n Simple_repeat Simple_repeat 2 179 0 3 1201 688 180 7 22 chrX 80829882 80830159 -85820137 + (CAGA)n Simple_repeat Simple_repeat 1 272 0 3 1201 569 226 6 0 chrX 80830172 80830349 -85819947 + (CAGA)n Simple_repeat Simple_repeat 1 178 0 3 1201 559 188 6 24 chrX 80830380 80830717 -85819579 + (CAGA)n Simple_repeat Simple_repeat 1 330 0 3 1201 363 181 0 0 chrX 80830739 80830811 -85819485 + (TGGA)n Simple_repeat Simple_repeat 3 74 0 3 1201 534 200 17 11 chrX 80830799 80830976 -85819320 + (CAGA)n Simple_repeat Simple_repeat 3 180 0 3 1201 456 179 12 41 chrX 80831003 80831251 -85819045 + (CAGA)n Simple_repeat Simple_repeat 1 240 0 3 1201 663 139 23 23 chrX 80831268 80831445 -85818851 + (CAGA)n Simple_repeat Simple_repeat 4 180 0 3 1201 445 243 23 0 chrX 80831496 80831669 -85818627 + (CAGA)n Simple_repeat Simple_repeat 2 178 0 3 1201 374 198 0 16 chrX 80831691 80831814 -85818482 + (CAGA)n Simple_repeat Simple_repeat 4 124 0 3 1201 640 169 17 17 chrX 80831872 80832052 -85818244 + (CAGA)n Simple_repeat Simple_repeat 1 180 0 3 1201 224 245 0 0 chrX 80832059 80832112 -85818184 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 3 1201 625 226 13 8 chrX 80832142 80832529 -85817767 + (CAGA)n Simple_repeat Simple_repeat 1 389 0 3 1201 400 225 0 23 chrX 80832545 80832722 -85817574 + (CAGA)n Simple_repeat Simple_repeat 3 175 0 3 1201 600 219 0 0 chrX 80832737 80832906 -85817390 + (CAGA)n Simple_repeat Simple_repeat 3 171 0 3 1201 360 211 14 7 chrX 80832942 80833085 -85817211 + (CAGA)n Simple_repeat Simple_repeat 3 146 0 3 1201 503 200 0 30 chrX 80833098 80833367 -85816929 + (CAGA)n Simple_repeat Simple_repeat 1 260 0 3 1201 510 206 9 29 chrX 80833413 80833866 -85816430 + (CAGA)n Simple_repeat Simple_repeat 1 443 0 3 1201 546 212 10 20 chrX 80833884 80834197 -85816099 + (CAGA)n Simple_repeat Simple_repeat 1 309 0 3 1201 844 142 4 21 chrX 80834255 80834495 -85815801 + (CAGA)n Simple_repeat Simple_repeat 1 235 0 3 1201 535 207 17 0 chrX 80834512 80834686 -85815610 + (CAGA)n Simple_repeat Simple_repeat 4 180 0 3 1201 284 277 24 0 chrX 80834687 80834770 -85815526 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 3 1201 635 221 4 17 chrX 80834791 80835326 -85814970 + (CAGA)n Simple_repeat Simple_repeat 1 527 0 3 1201 223 138 34 17 chrX 80835360 80835419 -85814877 + (CAGA)n Simple_repeat Simple_repeat 1 60 0 3 1201 591 216 0 0 chrX 80835444 80835611 -85814685 + (CAGA)n Simple_repeat Simple_repeat 2 168 0 3 1201 698 211 0 3 chrX 80835624 80835966 -85814330 + (CAGA)n Simple_repeat Simple_repeat 1 341 0 3 1201 294 215 10 20 chrX 80835984 80836189 -85814107 + (CAGA)n Simple_repeat Simple_repeat 1 202 0 3 1201 609 186 17 6 chrX 80836204 80836377 -85813919 + (CAGA)n Simple_repeat Simple_repeat 3 177 0 3 1201 180 152 0 0 chrX 80836383 80836416 -85813880 + (TGGA)n Simple_repeat Simple_repeat 4 36 0 3 1201 262 159 0 28 chrX 80836465 80836536 -85813760 + (CAGA)n Simple_repeat Simple_repeat 2 70 0 3 1201 455 235 6 0 chrX 80836576 80836742 -85813554 + (CAGA)n Simple_repeat Simple_repeat 2 168 0 3 1201 598 189 9 14 chrX 80836756 80836979 -85813317 + (CAGA)n Simple_repeat Simple_repeat 1 221 0 3 1201 221 128 0 21 chrX 80837012 80837060 -85813236 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 3 1201 557 191 23 6 chrX 80837092 80837266 -85813030 + (CAGA)n Simple_repeat Simple_repeat 4 180 0 3 1201 201 154 0 0 chrX 80837293 80837332 -85812964 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 3 1201 741 144 0 32 chrX 80837358 80837544 -85812752 + (CAGA)n Simple_repeat Simple_repeat 1 180 0 3 1201 575 224 6 0 chrX 80837601 80837780 -85812516 + (CAGA)n Simple_repeat Simple_repeat 1 180 0 3 1201 707 198 4 20 chrX 80837798 80838359 -85811937 + (CAGA)n Simple_repeat Simple_repeat 1 551 0 3 1201 455 165 0 9 chrX 80838438 80838548 -85811748 + (CAGA)n Simple_repeat Simple_repeat 2 110 0 3 1201 499 192 16 33 chrX 80838575 80838758 -85811538 + (CAGA)n Simple_repeat Simple_repeat 1 180 0 3 1201 409 212 13 13 chrX 80838782 80838940 -85811356 + (CAGA)n Simple_repeat Simple_repeat 3 160 0 3 1201 277 222 5 43 chrX 80838961 80839145 -85811151 + (CAGA)n Simple_repeat Simple_repeat 2 178 0 3 1201 548 220 5 11 chrX 80839156 80839544 -85810752 + (CAGA)n Simple_repeat Simple_repeat 1 386 0 3 1201 665 178 0 6 chrX 80839568 80839726 -85810570 + (CAGA)n Simple_repeat Simple_repeat 4 160 0 3 1201 210 264 0 0 chrX 80839729 80839782 -85810514 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 3 1201 363 203 22 8 chrX 80839814 80839948 -85810348 + (CAGA)n Simple_repeat Simple_repeat 1 136 0 3 1201 541 215 11 11 chrX 80839992 80840171 -85810125 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 3 1201 621 232 6 9 chrX 80840208 80841187 -85809109 + (CAGA)n Simple_repeat Simple_repeat 1 975 0 3 1201 537 183 0 0 chrX 80841153 80841257 -85809039 + (TGGA)n Simple_repeat Simple_repeat 3 106 0 3 1201 628 188 17 0 chrX 80841276 80841452 -85808844 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 3 1201 321 229 6 22 chrX 80841466 80841645 -85808651 + (CAGA)n Simple_repeat Simple_repeat 3 178 0 3 1201 526 214 8 21 chrX 80841656 80842042 -85808254 + (CAGA)n Simple_repeat Simple_repeat 1 380 0 3 1201 554 197 9 13 chrX 80842062 80842299 -85807997 + (CAGA)n Simple_repeat Simple_repeat 1 235 0 3 1201 338 188 0 10 chrX 80842328 80842430 -85807866 + (CAGA)n Simple_repeat Simple_repeat 2 102 0 3 1201 650 187 7 13 chrX 80842509 80842816 -85807480 + (CAGA)n Simple_repeat Simple_repeat 1 304 0 3 1201 651 206 0 0 chrX 80842831 80843006 -85807290 + (CAGA)n Simple_repeat Simple_repeat 2 176 0 3 1201 595 221 9 6 chrX 80843023 80843697 -85806599 + (CAGA)n Simple_repeat Simple_repeat 1 676 0 3 1201 591 227 6 6 chrX 80843729 80844067 -85806229 + (CAGA)n Simple_repeat Simple_repeat 1 338 0 3 1201 524 214 0 6 chrX 80844090 80844269 -85806027 + (CAGA)n Simple_repeat Simple_repeat 3 180 0 3 1201 621 166 0 33 chrX 80844282 80844463 -85805833 + (CAGA)n Simple_repeat Simple_repeat 2 176 0 3 1201 227 222 0 12 chrX 80844488 80844570 -85805726 + (CAGA)n Simple_repeat Simple_repeat 2 82 0 3 1201 457 238 8 5 chrX 80844611 80845005 -85805291 + (CAGA)n Simple_repeat Simple_repeat 1 394 0 3 1201 644 160 0 38 chrX 80845028 80845299 -85804997 + (CAGA)n Simple_repeat Simple_repeat 1 260 0 3 1201 649 203 5 18 chrX 80845314 80845759 -85804537 + (CAGA)n Simple_repeat Simple_repeat 1 438 0 3 1201 678 217 3 11 chrX 80845798 80846159 -85804137 + (CAGA)n Simple_repeat Simple_repeat 1 358 0 3 1201 602 202 5 5 chrX 80846200 80846606 -85803690 + (CAGA)n Simple_repeat Simple_repeat 1 406 0 3 1201 191 179 36 0 chrX 80846642 80846698 -85803598 + (CAGA)n Simple_repeat Simple_repeat 1 58 0 3 1201 552 223 8 5 chrX 80846723 80847138 -85803158 + (CAGA)n Simple_repeat Simple_repeat 1 416 0 3 1201 201 180 0 0 chrX 80847172 80847222 -85803074 + (CAGA)n Simple_repeat Simple_repeat 3 52 0 3 1201 596 202 0 9 chrX 80847243 80847471 -85802825 + (CAGA)n Simple_repeat Simple_repeat 1 225 0 3 1201 613 186 0 17 chrX 80847482 80847657 -85802639 + (CAGA)n Simple_repeat Simple_repeat 3 174 0 3 1201 676 216 10 13 chrX 80847679 80848369 -85801927 + (CAGA)n Simple_repeat Simple_repeat 1 688 0 3 1201 658 205 3 25 chrX 80848426 80849046 -85801250 + (CAGA)n Simple_repeat Simple_repeat 1 606 0 3 1201 642 183 11 22 chrX 80849101 80849280 -85801016 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 3 1201 271 258 39 49 chrX 80849384 80849486 -85800810 - RMER15 LTR ERVL -441 134 34 3 1201 1035 73 0 21 chrX 80849495 80849635 -85800661 + B1_Mus1 SINE Alu 2 138 -10 3 1201 183 42 0 0 chrX 80849635 80849659 -85800637 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1201 21 0 0 0 chrX 80849819 80849840 -85800456 + AT_rich Low_complexity Low_complexity 1 21 0 3 1201 22 0 0 0 chrX 80850259 80850281 -85800015 + AT_rich Low_complexity Low_complexity 1 22 0 3 1201 25 51 0 0 chrX 80850943 80850982 -85799314 + AT_rich Low_complexity Low_complexity 1 39 0 3 1201 792 325 73 18 chrX 80851139 80851765 -85798531 + L1M2 LINE L1 4134 4796 -1347 3 1201 284 287 60 73 chrX 80852056 80852289 -85798007 + L1M2 LINE L1 5262 5491 -806 3 1201 2318 205 102 16 chrX 80852629 80852716 -85797580 - RMER20B LTR ERVK -72 555 473 3 1201 324 0 0 0 chrX 80852716 80852752 -85797544 + (TGG)n Simple_repeat Simple_repeat 3 38 0 3 1201 2318 205 102 16 chrX 80852752 80853175 -85797121 - RMER20B LTR ERVK -155 472 1 3 1201 665 339 44 44 chrX 80853181 80853656 -85796640 - MERVK26-int LTR ERVK -4 6915 6441 3 1201 1419 139 16 12 chrX 80853662 80853916 -85796380 - L1Md_F3 LINE L1 -14 6570 6316 3 1201 327 239 0 0 chrX 80853934 80854001 -85796295 - MERVK26-int LTR ERVK -468 6451 6385 3 1201 34 24 0 0 chrX 80854299 80854340 -85795956 + AT_rich Low_complexity Low_complexity 1 41 0 3 1201 22 35 0 0 chrX 80854492 80854521 -85795775 + AT_rich Low_complexity Low_complexity 1 29 0 3 1201 321 169 0 0 chrX 80854609 80854668 -85795628 + (TA)n Simple_repeat Simple_repeat 2 60 0 3 1201 294 233 0 14 chrX 80854910 80854984 -85795312 + URR1B DNA MER1_type 110 182 -43 3 1201 323 233 32 32 chrX 80855437 80855530 -85794766 + RMER15 LTR ERVL 39 131 -444 3 1201 1135 266 124 30 chrX 80857417 80857789 -85792507 - MTD LTR MaLR -12 407 1 3 1201 21 0 0 0 chrX 80857877 80857898 -85792398 + AT_rich Low_complexity Low_complexity 1 21 0 3 1201 1122 69 7 0 chrX 80857912 80858057 -85792239 - B1_Mus2 SINE Alu 0 147 2 3 1201 1727 302 145 25 chrX 80858475 80859340 -85790956 + Lx6 LINE L1 6232 7429 -31 4 1201 993 243 170 10 chrX 80860179 80860398 -85789898 - Lx7 LINE L1 -2 7694 7429 4 1201 1328 143 24 16 chrX 80860398 80860646 -85789650 + Lx2A1 LINE L1 6759 7008 0 4 1201 993 243 170 10 chrX 80860646 80860704 -85789592 - Lx7 LINE L1 -268 7428 7363 4 1201 1570 169 14 11 chrX 80860704 80860985 -85789311 - Lx2 LINE L1 -1 6996 6715 4 1201 993 243 170 10 chrX 80860985 80861105 -85789191 - Lx7 LINE L1 -334 7362 7234 4 1201 717 241 0 0 chrX 80861117 80861258 -85789038 - Lx7 LINE L1 -1019 6677 6537 4 1201 4552 59 2 2 chrX 80861337 80861910 -85788386 - L1_Mus2 LINE L1 -158 6408 5836 4 1201 565 299 50 27 chrX 80863725 80863945 -85786351 - Lx8 LINE L1 -203 7270 7046 4 1201 311 303 73 0 chrX 80863927 80864036 -85786260 + Lx8 LINE L1 6894 7010 -463 4 1201 419 374 26 6 chrX 80864300 80864456 -85785840 + RSINE1 SINE B4 7 165 0 4 1201 1061 117 11 6 chrX 80864559 80864740 -85785556 - L1_Mus3 LINE L1 -3 6635 6454 4 1201 4655 79 3 5 chrX 80864741 80865362 -85784934 + L1_Mus3 LINE L1 5816 6435 -203 4 1201 294 29 0 0 chrX 80865366 80865401 -85784895 + (CTTG)n Simple_repeat Simple_repeat 2 36 0 4 1201 1099 75 0 13 chrX 80865427 80865576 -85784720 - B1_Mm SINE Alu 0 147 1 4 1201 221 0 35 0 chrX 80866401 80866430 -85783866 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 1201 21 0 0 0 chrX 80866774 80866795 -85783501 + AT_rich Low_complexity Low_complexity 1 21 0 4 1201 192 152 0 0 chrX 80867444 80867477 -85782819 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1201 8182 89 40 8 chrX 80868046 80869211 -85781085 - Lx3_Mus LINE L1 -8 7001 5799 4 1201 317 297 56 31 chrX 80869545 80869705 -85780591 - L1M2 LINE L1 -925 5218 5055 4 1201 312 48 0 0 chrX 80869788 80869830 -85780466 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1201 912 44 0 0 chrX 80869909 80870022 -85780274 + (TCTCCC)n Simple_repeat Simple_repeat 6 118 0 4 1201 993 113 0 0 chrX 80870024 80870166 -85780130 - B1_Mus1 SINE Alu -6 142 1 4 1201 201 74 0 0 chrX 80870207 80870234 -85780062 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1201 336 363 6 55 chrX 80870234 80870400 -85779896 - B4A SINE B4 -104 188 28 4 1201 799 310 81 35 chrX 80870577 80870925 -85779371 - Lx8 LINE L1 -178 7295 6932 4 1201 368 148 0 0 chrX 80871179 80871233 -85779063 - MYSERV6-int LTR ERVK -355 8604 8551 4 150 443 213 83 96 chrX 80871230 80871448 -85778848 - MYSERV6-int LTR ERVK -981 7978 7764 4 1202 453 231 9 9 chrX 80871459 80871564 -85778732 - Lx6 LINE L1 -219 7241 7137 4 1202 1076 320 11 22 chrX 80871562 80871933 -85778363 - Lx6 LINE L1 -779 6681 6315 4 1202 630 262 25 0 chrX 80871925 80872085 -85778211 + Lx6 LINE L1 6175 6338 -1122 4 1202 21 57 0 0 chrX 80872202 80872237 -85778059 + AT_rich Low_complexity Low_complexity 1 35 0 4 1202 225 164 55 0 chrX 80872852 80872907 -85777389 + (TATG)n Simple_repeat Simple_repeat 2 59 0 4 1202 201 74 0 0 chrX 80874143 80874170 -85776126 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 4 1202 252 299 35 98 chrX 80874483 80874657 -85775639 - RMER12 LTR ERVK -477 845 683 4 1202 3683 67 19 0 chrX 80876007 80876473 -85773823 - MT2C_Mm LTR ERVL 0 475 1 4 1202 840 128 0 0 chrX 80877532 80877665 -85772631 + (TTTC)n Simple_repeat Simple_repeat 1 133 0 4 1202 962 105 0 0 chrX 80877668 80877801 -85772495 - B1_Mus1 SINE Alu -15 133 1 4 1202 774 117 0 0 chrX 80877842 80877962 -85772334 + (TCC)n Simple_repeat Simple_repeat 2 121 0 4 1202 22 0 0 0 chrX 80878998 80879020 -85771276 + AT_rich Low_complexity Low_complexity 1 22 0 4 1202 489 34 0 0 chrX 80879152 80879211 -85771085 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 4 1202 519 315 32 59 chrX 80879499 80879752 -85770544 + MER2 DNA MER2_type 100 345 0 4 1202 8148 140 38 15 chrX 80880418 80880739 -85769557 + Lx2 LINE L1 4426 4733 -1150 4 1202 410 0 0 20 chrX 80880739 80880790 -85769506 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 4 1202 8148 177 75 23 chrX 80880790 80882905 -85767391 + Lx2 LINE L1 4734 6993 -4 4 1202 24 32 0 0 chrX 80883302 80883333 -85766963 + AT_rich Low_complexity Low_complexity 1 31 0 4 1202 30 59 0 0 chrX 80884548 80884599 -85765697 + AT_rich Low_complexity Low_complexity 1 51 0 4 1202 23 0 0 0 chrX 80885821 80885844 -85764452 + AT_rich Low_complexity Low_complexity 1 23 0 4 1202 458 316 64 32 chrX 80888232 80888677 -85761619 - L1MA4 LINE L1 -410 5887 5424 4 1202 893 314 19 19 chrX 80888803 80889128 -85761168 - Lx7 LINE L1 -780 6693 6369 4 1202 552 251 15 0 chrX 80889114 80889266 -85761030 - Lx7 LINE L1 -1978 5718 5561 4 1202 4164 245 83 19 chrX 80889282 80889884 -85760412 - Lx9 LINE L1 -3 7641 6996 4 1202 2723 146 33 17 chrX 80889884 80890366 -85759930 + Lx LINE L1 6158 6647 -7 4 1202 4164 245 83 19 chrX 80890366 80890906 -85759390 - Lx9 LINE L1 -649 6995 6426 4 1202 2105 177 62 12 chrX 80890894 80891504 -85758792 - Lx7 LINE L1 -1525 6171 5534 4 1202 429 253 109 11 chrX 80891505 80891689 -85758607 + Lx7 LINE L1 5986 6187 -1509 4 1202 235 255 0 0 chrX 80891684 80891735 -85758561 - Lx7 LINE L1 -343 5537 5487 4 1202 745 193 65 12 chrX 80891736 80891904 -85758392 + URR1B DNA MER1_type 49 225 0 4 1202 5395 195 95 88 chrX 80891905 80892309 -85757987 - L1_Mur3 LINE L1 -2831 3049 2622 4 1202 794 136 0 19 chrX 80892309 80892467 -85757829 - RMER17B LTR ERVK -495 463 309 4 1202 5395 195 95 88 chrX 80892467 80894887 -85755409 - L1_Mur3 LINE L1 -2831 2621 56 4 1202 279 326 14 35 chrX 80895001 80895144 -85755152 + L2 LINE L2 2291 2430 -989 4 1202 30 69 0 0 chrX 80895238 80895296 -85755000 + AT_rich Low_complexity Low_complexity 1 58 0 4 1202 22 35 0 0 chrX 80895986 80896015 -85754281 + AT_rich Low_complexity Low_complexity 1 29 0 4 1202 404 317 90 16 chrX 80897599 80897788 -85752508 - ORR1E LTR MaLR -28 331 129 4 1202 226 337 24 0 chrX 80897931 80898014 -85752282 - L1M2 LINE L1 -557 5743 5659 4 1202 180 0 0 0 chrX 80898103 80898123 -85752173 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1202 27 29 0 0 chrX 80898296 80898330 -85751966 + AT_rich Low_complexity Low_complexity 1 34 0 4 1202 248 233 43 32 chrX 80898404 80898497 -85751799 + Charlie7 DNA MER1_type 1728 1821 -791 4 1202 21 100 0 0 chrX 80899374 80899444 -85750852 + AT_rich Low_complexity Low_complexity 1 70 0 4 1202 216 0 0 0 chrX 80899454 80899478 -85750818 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1202 210 105 0 0 chrX 80899481 80899519 -85750777 + (T)n Simple_repeat Simple_repeat 1 38 0 4 1202 348 403 52 55 chrX 80899526 80899815 -85750481 - B4 SINE B4 -3 289 2 4 1202 623 108 0 0 chrX 80900091 80900193 -85750103 - Lx2 LINE L1 0 6997 6896 4 1202 40 83 0 0 chrX 80900971 80901067 -85749229 + AT_rich Low_complexity Low_complexity 1 96 0 4 1202 211 257 37 98 chrX 80901571 80901653 -85748643 - PB1D7 SINE Alu 0 120 44 4 1202 246 271 14 0 chrX 80901698 80901768 -85748528 + CT-rich Low_complexity Low_complexity 1 71 0 4 1202 349 181 38 0 chrX 80901769 80901902 -85748394 + (TA)n Simple_repeat Simple_repeat 2 139 0 4 1202 440 155 28 0 chrX 80902065 80902207 -85748089 + (TA)n Simple_repeat Simple_repeat 1 146 0 4 1202 336 48 0 0 chrX 80902207 80902249 -85748047 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1202 864 250 6 0 chrX 80902454 80902633 -85747663 + URR1B DNA MER1_type 6 185 -40 4 1202 5567 156 51 52 chrX 80902633 80903038 -85747258 - RLTR25A LTR ERVK 0 1103 690 4 1202 2448 86 24 79 chrX 80903038 80903455 -85746841 - Lx LINE L1 -3 6651 6258 4 1202 5567 156 51 52 chrX 80903455 80904142 -85746154 - RLTR25A LTR ERVK -414 689 13 4 1202 270 292 101 58 chrX 80904135 80904324 -85745972 + Tigger7 DNA MER2_type 2171 2367 -124 4 1202 235 379 139 9 chrX 80904795 80905011 -85745285 - MLT1J LTR MaLR -264 248 5 4 1202 901 67 7 29 chrX 80905783 80905922 -85744374 + L1_Mus2 LINE L1 6427 6562 -4 4 1202 508 308 71 37 chrX 80906148 80906499 -85743797 - Tigger10 DNA Tigger -607 1236 874 4 1202 329 326 97 0 chrX 80907294 80907469 -85742827 - MER45B DNA Tip100 -231 809 618 4 1202 212 0 0 35 chrX 80908379 80908408 -85741888 + (TGGGGG)n Simple_repeat Simple_repeat 2 29 0 4 1202 1073 53 0 0 chrX 80908408 80908540 -85741756 - B1_Mus1 SINE Alu -16 132 1 4 1202 195 42 0 0 chrX 80908989 80909013 -85741283 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1202 450 0 0 0 chrX 80909014 80909064 -85741232 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 1202 227 308 0 13 chrX 80910576 80910655 -85739641 + (TG)n Simple_repeat Simple_repeat 1 78 0 4 1202 210 229 0 0 chrX 80910678 80910713 -85739583 - BC1_Mm scRNA scRNA -110 42 8 4 1202 245 362 13 60 chrX 80910717 80910867 -85739429 - ID_B1 SINE B4 -7 217 75 4 1202 423 0 0 0 chrX 80910937 80910984 -85739312 + (GAAA)n Simple_repeat Simple_repeat 1 47 0 4 1202 513 0 0 0 chrX 80910984 80911040 -85739256 + (GGGA)n Simple_repeat Simple_repeat 4 60 0 4 1202 1625 202 74 30 chrX 80911040 80911443 -85738853 - RMER10A LTR ERVL -19 423 3 4 1202 528 315 28 75 chrX 80911525 80911738 -85738558 - B3 SINE B2 -1 215 13 4 1202 1443 113 13 0 chrX 80911763 80911993 -85738303 + L1_Mus3 LINE L1 6404 6636 -2 4 1202 8364 130 32 20 chrX 80913394 80914905 -85735391 - Lx3_Mus LINE L1 0 7009 5485 4 1202 219 114 0 0 chrX 80915030 80915065 -85735231 + (CAA)n Simple_repeat Simple_repeat 1 35 0 4 1202 404 305 8 15 chrX 80917740 80917873 -85732423 + MER5A1 DNA MER1_type 17 148 -18 4 1202 24 0 0 0 chrX 80918709 80918733 -85731563 + AT_rich Low_complexity Low_complexity 1 24 0 4 1202 1429 214 19 32 chrX 80918773 80918888 -85731408 - MYSERV16_I-int LTR ERVK -409 1917 1814 4 1202 2519 89 17 0 chrX 80918888 80919248 -85731048 + L1_Mus2 LINE L1 6201 6566 0 4 1202 1429 213 18 30 chrX 80919248 80919470 -85730826 - MYSERV16_I-int LTR ERVK -513 1813 1588 4 1202 3688 87 31 6 chrX 80919470 80920011 -85730285 + L1Md_F2 LINE L1 6026 6580 -2 4 1202 1050 257 41 96 chrX 80920011 80920111 -85730185 - MYSERV16_I-int LTR ERVK -741 5809 5740 4 1202 767 219 22 22 chrX 80920720 80920987 -85729309 - MYSERV16_I-int LTR ERVK -906 1420 1247 4 1202 204 40 0 0 chrX 80921857 80921882 -85728414 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 4 1202 1366 213 291 2 chrX 80921882 80922277 -85728019 - Lx4B LINE L1 -21 7037 6529 4 1202 303 344 0 30 chrX 80922281 80922380 -85727916 - RSINE1 SINE B4 -68 97 2 4 1202 282 212 17 17 chrX 80922470 80922585 -85727711 + (CATA)n Simple_repeat Simple_repeat 2 116 0 4 1202 196 276 19 0 chrX 80922633 80922738 -85727558 + (TA)n Simple_repeat Simple_repeat 1 107 0 4 1202 401 276 0 6 chrX 80922761 80922929 -85727367 + (TA)n Simple_repeat Simple_repeat 1 167 0 4 1202 518 239 0 27 chrX 80922972 80923338 -85726958 + (TA)n Simple_repeat Simple_repeat 1 355 0 4 1202 315 292 34 34 chrX 80923343 80923460 -85726836 + L1MCa LINE L1 1890 2006 -4502 5 1202 397 281 20 35 chrX 80924099 80924256 -85726040 + MLT1A1 LTR MaLR 231 408 0 5 1202 531 78 0 0 chrX 80924628 80924705 -85725591 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 1202 22 35 0 0 chrX 80924952 80924981 -85725315 + AT_rich Low_complexity Low_complexity 1 29 0 5 1202 336 48 0 0 chrX 80925026 80925068 -85725228 + (T)n Simple_repeat Simple_repeat 1 42 0 5 1202 285 293 32 16 chrX 80925747 80925761 -85724535 - Lx7 LINE L1 -5 7691 7676 5 1202 288 0 0 0 chrX 80925761 80925793 -85724503 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 1202 285 293 32 16 chrX 80925793 80925903 -85724393 - Lx7 LINE L1 -21 7675 7565 5 1202 8233 41 1 0 chrX 80926713 80928352 -85721944 - L1Md_F2 LINE L1 -14 6568 4929 5 1202 188 356 35 0 chrX 80928657 80928744 -85721552 + L3b LINE CR1 325 414 -68 5 1202 211 54 0 51 chrX 80930428 80930467 -85719829 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 5 1202 1046 116 0 0 chrX 80930467 80930614 -85719682 - B1_Mus2 SINE Alu 0 147 1 5 1202 226 374 86 21 chrX 80930676 80930862 -85719434 - MIRb SINE MIR -1 267 70 5 1202 1623 269 47 47 chrX 80931607 80932201 -85718095 - Lx8 LINE L1 -7 7466 6873 5 1202 448 316 28 6 chrX 80932249 80932427 -85717869 + B3A SINE B2 1 182 -16 5 1202 258 207 17 0 chrX 80932428 80932486 -85717810 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 1202 32 43 0 0 chrX 80932538 80932584 -85717712 + AT_rich Low_complexity Low_complexity 1 46 0 5 1202 30 83 0 0 chrX 80932985 80933057 -85717239 + AT_rich Low_complexity Low_complexity 1 72 0 5 1202 44 0 0 0 chrX 80934191 80934235 -85716061 + AT_rich Low_complexity Low_complexity 1 44 0 5 1202 1875 128 45 9 chrX 80934293 80934624 -85715672 - L1_Mus4 LINE L1 0 6636 6294 5 1202 24 32 0 0 chrX 80935251 80935282 -85715014 + AT_rich Low_complexity Low_complexity 1 31 0 5 1202 225 0 0 0 chrX 80936040 80936065 -85714231 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 1202 1545 83 14 0 chrX 80936126 80936343 -85713953 - L1_Mus2 LINE L1 -1 6565 6346 5 1202 677 120 16 8 chrX 80936401 80936527 -85713769 + L1_Mus3 LINE L1 6504 6630 -8 5 1202 468 326 0 8 chrX 80937765 80937895 -85712401 + ID_B1 SINE B4 94 222 -2 5 1202 656 271 29 0 chrX 80937908 80938115 -85712181 + B3 SINE B2 2 214 -2 5 1202 528 311 29 47 chrX 80938207 80938484 -85711812 - B4A SINE B4 -18 274 3 5 1202 275 322 92 40 chrX 80939372 80939524 -85710772 + B4A SINE B4 1 160 -132 5 1202 30 0 0 0 chrX 80939695 80939725 -85710571 + AT_rich Low_complexity Low_complexity 1 30 0 5 1202 1048 248 36 113 chrX 80939958 80940322 -85709974 - RLTR18 LTR ERVK -264 352 17 5 1202 266 342 53 13 chrX 80941113 80941264 -85709032 + Charlie5 DNA MER1_type 2261 2417 -207 5 1202 243 61 0 0 chrX 80941425 80941458 -85708838 + (TAA)n Simple_repeat Simple_repeat 3 35 0 5 1202 1548 27 0 36 chrX 80941804 80941996 -85708300 + B2_Mm1t SINE B2 2 186 -7 5 1202 29 47 0 0 chrX 80942164 80942207 -85708089 + AT_rich Low_complexity Low_complexity 1 43 0 5 1202 9983 116 111 25 chrX 80942384 80943390 -85706906 - L1_Mus3 LINE L1 -368 6270 5137 5 1202 217 298 70 0 chrX 80943390 80943447 -85706849 + RSINE1 SINE B4 97 157 -8 5 1202 9983 116 111 25 chrX 80943447 80944790 -85705506 - L1_Mus3 LINE L1 -368 5136 3620 5 1202 2897 201 117 6 chrX 80944791 80945450 -85704846 - L1VL2 LINE L1 -5537 798 67 5 1202 27 87 0 0 chrX 80946059 80946128 -85704168 + AT_rich Low_complexity Low_complexity 1 69 0 5 1202 301 231 15 0 chrX 80946131 80946196 -85704100 + MTC LTR MaLR 1 66 -355 5 1202 34125 78 5 2 chrX 80946213 80951826 -85698470 - L1Md_F2 LINE L1 -12 6570 942 5 1202 1000 65 0 0 chrX 80951825 80951948 -85698348 - L1Md_F2 LINE L1 -6112 504 382 5 1202 424 218 0 0 chrX 80951950 80952028 -85698268 + MTC LTR MaLR 57 134 -287 5 1202 935 252 0 9 chrX 80953327 80953555 -85696741 + URR1A DNA MER1_type 1 226 0 5 1202 1091 77 0 0 chrX 80954132 80954275 -85696021 + B1_Mus2 SINE Alu 5 147 0 5 1202 270 0 0 0 chrX 80954277 80954307 -85695989 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 1202 198 0 0 0 chrX 80954734 80954756 -85695540 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 1202 266 0 29 0 chrX 80955215 80955249 -85695047 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1202 1469 130 59 4 chrX 80955851 80956106 -85694190 + Lx3A LINE L1 6709 6977 -4 5 1202 207 204 0 0 chrX 80956366 80956410 -85693886 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 1202 282 319 44 75 chrX 80956941 80957168 -85693128 - MLT1B LTR MaLR -167 223 4 5 1202 28 48 0 0 chrX 80957413 80957455 -85692841 + AT_rich Low_complexity Low_complexity 1 42 0 5 1202 186 156 0 0 chrX 80958130 80958175 -85692121 + (TTA)n Simple_repeat Simple_repeat 1 45 0 5 1202 5303 114 20 6 chrX 80958207 80959008 -85691288 - Lx3B LINE L1 -41 6932 6121 5 1202 1170 29 0 0 chrX 80960495 80960635 -85689661 + B1_Mm SINE Alu 2 141 -6 5 1202 189 107 0 0 chrX 80960645 80960673 -85689623 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1202 743 297 5 9 chrX 80960695 80960916 -85689380 + ID_B1 SINE B4 2 221 -3 5 1202 230 321 19 0 chrX 80961015 80961068 -85689228 - MLT1G LTR MaLR -485 106 53 5 1202 6593 100 45 49 chrX 80961086 80961660 -85688636 + Lx LINE L1 5588 6172 -482 5 1202 465 50 0 0 chrX 80961660 80961720 -85688576 + (TC)n Simple_repeat Simple_repeat 2 61 0 5 1202 6593 100 45 49 chrX 80961720 80961763 -85688533 + Lx LINE L1 6173 6173 -481 5 1202 1114 89 0 0 chrX 80961763 80961909 -85688387 - B1_Mm SINE Alu -1 146 1 5 1202 6593 100 45 49 chrX 80961909 80962354 -85687942 + Lx LINE L1 6173 6647 -7 5 1202 426 348 54 33 chrX 80963697 80963881 -85686415 + MER5A DNA MER1_type 2 189 0 5 1202 3377 53 7 14 chrX 80967589 80968027 -85682269 + L1Md_F2 LINE L1 6140 6574 -8 5 1202 360 0 0 0 chrX 80968641 80968681 -85681615 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 1202 234 0 0 0 chrX 80968681 80968706 -85681590 + (GA)n Simple_repeat Simple_repeat 2 27 0 5 1202 288 0 0 0 chrX 80968734 80968766 -85681530 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1202 4354 64 0 21 chrX 80968896 80969474 -85680822 - L1Md_F2 LINE L1 -12 6570 6005 5 1202 2540 69 11 2 chrX 80969475 80970095 -85680201 - L1Md_F3 LINE L1 -14 6570 5707 5 1202 21 0 0 0 chrX 80971090 80971111 -85679185 + AT_rich Low_complexity Low_complexity 1 21 0 5 1202 3845 168 55 12 chrX 80971232 80971987 -85678309 - Lx3A LINE L1 -17 7041 6253 5 1202 5254 44 3 0 chrX 80972496 80973138 -85677158 + L1Md_F2 LINE L1 5926 6569 -13 5 1202 1345 153 67 0 chrX 80973158 80973412 -85676884 - Lx2 LINE L1 -3 6994 6724 5 1202 34 65 0 0 chrX 80974111 80974173 -85676123 + AT_rich Low_complexity Low_complexity 1 62 0 5 1202 27 81 0 0 chrX 80975689 80975751 -85674545 + AT_rich Low_complexity Low_complexity 1 62 0 5 1202 530 312 31 0 chrX 80975985 80976049 -85674247 - B4A SINE B4 -11 281 231 5 1202 2315 50 13 7 chrX 80976049 80976348 -85673948 - L1Md_F2 LINE L1 0 6582 6282 5 1202 530 333 38 107 chrX 80976348 80976584 -85673712 - B4A SINE B4 -62 230 13 5 1202 326 269 190 7 chrX 80976593 80976735 -85673561 + MER58B DNA MER1_type 88 255 -86 5 1202 198 340 19 39 chrX 80978234 80978338 -85671958 + MIR SINE MIR 23 124 -138 5 1202 261 0 0 0 chrX 80978507 80978536 -85671760 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1202 8769 100 23 6 chrX 80978614 80979836 -85670460 + L1_Mm LINE L1 4050 5295 -588 5 1202 8475 16 5 0 chrX 80979836 80980803 -85669493 + L1Md_A LINE L1 5611 6582 0 5 1202 8769 129 23 9 chrX 80980803 80980928 -85669368 + L1_Mm LINE L1 5296 5450 -847 5 1202 184 289 0 0 chrX 80981527 80981565 -85668731 - MIRc SINE MIR -139 129 92 5 1202 255 333 94 35 chrX 80981877 80982048 -85668248 + MER5A DNA MER1_type 2 182 -7 5 1202 207 0 0 0 chrX 80982127 80982150 -85668146 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1202 347 272 112 31 chrX 80982455 80982679 -85667617 + L1MA6 LINE L1 6051 6292 -8 5 1202 379 340 96 38 chrX 80982885 80983386 -85666910 + L2 LINE L2 1911 2440 -979 5 1202 638 257 38 38 chrX 80987243 80987266 -85663030 + L1M5 LINE L1 5572 5594 -568 5 1202 8012 96 27 3 chrX 80987266 80988337 -85661959 - Lx3_Mus LINE L1 -1 7008 5927 5 1202 204 40 0 0 chrX 80988337 80988362 -85661934 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 1202 8012 96 27 3 chrX 80988362 80988444 -85661852 - Lx3_Mus LINE L1 -1083 5926 5830 5 1202 1862 113 0 0 chrX 80988444 80988709 -85661587 + Lx3_Mus LINE L1 5567 5831 -55 5 1202 369 0 0 0 chrX 80988801 80988842 -85661454 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1202 425 326 7 35 chrX 80988843 80988986 -85661310 - RSINE1 SINE B4 -24 141 3 5 1202 999 106 7 0 chrX 80989293 80989434 -85660862 + B1_Mus1 SINE Alu 3 144 -4 5 1202 372 162 29 39 chrX 80989638 80989741 -85660555 - L1Md_F2 LINE L1 -4 6578 6477 5 1202 1691 45 0 0 chrX 80989741 80989943 -85660353 + L1_Mus1 LINE L1 6123 6324 -243 5 1202 30 27 0 0 chrX 80990993 80991030 -85659266 + AT_rich Low_complexity Low_complexity 1 37 0 5 1202 1970 124 17 67 chrX 80991061 80991406 -85658890 - ORR1A4 LTR MaLR -1 328 1 5 1202 462 313 0 58 chrX 80991732 80991888 -85658408 + RSINE1 SINE B4 15 161 -4 5 1202 181 0 0 65 chrX 80992284 80992315 -85657981 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1202 660 345 98 20 chrX 80992576 80993026 -85657270 - Lx8 LINE L1 -254 7219 6735 5 1202 21 0 0 0 chrX 80993159 80993180 -85657116 + AT_rich Low_complexity Low_complexity 1 21 0 5 1202 342 0 0 0 chrX 80993681 80993719 -85656577 + (TTC)n Simple_repeat Simple_repeat 2 39 0 5 1202 234 0 0 0 chrX 80993719 80993745 -85656551 + (TTA)n Simple_repeat Simple_repeat 3 28 0 5 1202 15707 108 25 9 chrX 80993750 80997213 -85653083 - Lx3A LINE L1 -4 6977 3476 5 1202 648 0 0 0 chrX 80997213 80997285 -85653011 + (TA)n Simple_repeat Simple_repeat 2 73 0 5 1202 12988 176 22 105 chrX 80997285 80998140 -85652156 - Lx3A LINE L1 -2411 3466 2919 5 1202 374 342 100 38 chrX 80998707 80998917 -85651379 - LTR16C LTR ERVL -25 464 242 6 1202 189 0 0 0 chrX 80999062 80999083 -85651213 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 6 1202 1256 235 71 112 chrX 80999554 80999990 -85650306 + MTC LTR MaLR 2 419 -2 6 1202 350 415 35 18 chrX 81000155 81000383 -85649913 - MLT1H2 LTR MaLR -247 242 11 1 1202 206 386 0 24 chrX 81000448 81000533 -85649763 + L3 LINE CR1 4367 4449 -40 2 1202 991 82 0 75 chrX 81001673 81001832 -85648464 + B1_Mm SINE Alu 1 147 0 3 1202 219 36 0 0 chrX 81001832 81001860 -85648436 + (CAA)n Simple_repeat Simple_repeat 3 30 0 4 1202 275 91 0 35 chrX 81001854 81001911 -85648385 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 5 1202 31 58 0 0 chrX 81002168 81002220 -85648076 + AT_rich Low_complexity Low_complexity 1 52 0 6 1202 21 82 0 0 chrX 81002271 81002320 -85647976 + AT_rich Low_complexity Low_complexity 1 49 0 7 150 2068 317 100 17 chrX 81002406 81003453 -85646843 - Lx8 LINE L1 -121 7352 6219 8 1203 423 0 0 0 chrX 81003923 81003970 -85646326 + (TA)n Simple_repeat Simple_repeat 1 47 0 9 1203 915 68 0 8 chrX 81004018 81004151 -85646145 + L1Md_F2 LINE L1 6438 6569 -13 1 1203 981 306 29 53 chrX 81005011 81005391 -85644905 - Lx5 LINE L1 -15 7035 6665 1 1203 621 257 64 0 chrX 81005412 81005552 -85644744 - B1_Mur4 SINE Alu 0 150 2 1 1203 451 314 33 33 chrX 81006210 81006421 -85643875 + B3 SINE B2 2 212 -4 1 1203 315 0 0 0 chrX 81006518 81006553 -85643743 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1203 25 51 0 0 chrX 81006778 81006817 -85643479 + AT_rich Low_complexity Low_complexity 1 39 0 1 1203 18904 68 1 5 chrX 81007385 81009898 -85640398 + L1Md_F2 LINE L1 3082 5585 -298 1 1203 7396 71 10 1 chrX 81009899 81010871 -85639425 + L1Md_F2 LINE L1 5587 6567 -15 1 1203 22 35 0 0 chrX 81011160 81011189 -85639107 + AT_rich Low_complexity Low_complexity 1 29 0 1 1203 22 0 0 0 chrX 81011583 81011605 -85638691 + AT_rich Low_complexity Low_complexity 1 22 0 1 1203 31 0 0 0 chrX 81011760 81011791 -85638505 + AT_rich Low_complexity Low_complexity 1 31 0 1 1203 180 0 0 0 chrX 81011791 81011811 -85638485 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 1203 441 36 0 0 chrX 81012196 81012251 -85638045 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 1203 248 118 59 0 chrX 81012616 81012684 -85637612 + (TA)n Simple_repeat Simple_repeat 2 73 0 2 1203 189 74 0 0 chrX 81012897 81012924 -85637372 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 1203 199 388 49 24 chrX 81013182 81013428 -85636868 - L2 LINE L2 -1203 2216 1965 2 1203 210 71 0 0 chrX 81014881 81014909 -85635387 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 1203 198 0 0 0 chrX 81015520 81015542 -85634754 + (T)n Simple_repeat Simple_repeat 1 22 0 2 1203 1208 34 0 0 chrX 81015542 81015689 -85634607 - B1_Mm SINE Alu 0 147 1 2 1203 24 32 0 0 chrX 81016731 81016762 -85633534 + AT_rich Low_complexity Low_complexity 1 31 0 2 1203 274 308 25 17 chrX 81016839 81016958 -85633338 - Charlie5 DNA MER1_type -2504 120 1 2 1203 235 333 57 51 chrX 81017294 81017471 -85632825 - B2_Mm2 SINE B2 -8 187 10 3 1203 422 392 6 12 chrX 81017315 81017475 -85632821 - RSINE1 SINE B4 0 165 7 3 1203 24 67 0 0 chrX 81018171 81018216 -85632080 + AT_rich Low_complexity Low_complexity 1 45 0 3 1203 28 0 0 0 chrX 81018442 81018470 -85631826 + AT_rich Low_complexity Low_complexity 1 28 0 3 1203 557 346 0 0 chrX 81020107 81020292 -85630004 - Lx6 LINE L1 -156 7304 7120 3 1203 35 41 0 0 chrX 81023282 81023331 -85626965 + AT_rich Low_complexity Low_complexity 1 49 0 3 1203 3667 71 2 6 chrX 81024175 81024669 -85625627 - L1Md_F2 LINE L1 -3 6579 6088 3 1203 986 49 0 0 chrX 81024669 81024791 -85625505 + L1Md_F2 LINE L1 5907 6028 -554 3 1203 202 180 0 90 chrX 81025054 81025121 -85625175 + (TTTA)n Simple_repeat Simple_repeat 2 62 0 3 1203 868 116 95 24 chrX 81025122 81025290 -85625006 - Lx3A LINE L1 -2 6979 6800 3 1203 31 44 0 0 chrX 81026433 81026478 -85623818 + AT_rich Low_complexity Low_complexity 1 45 0 3 1203 25 31 0 0 chrX 81026714 81026746 -85623550 + AT_rich Low_complexity Low_complexity 1 32 0 4 1203 371 21 21 0 chrX 81026746 81026794 -85623502 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 4 1203 423 160 0 0 chrX 81028059 81028134 -85622162 + (TA)n Simple_repeat Simple_repeat 1 75 0 4 1203 1038 73 0 0 chrX 81028430 81028567 -85621729 + L1_Mus1 LINE L1 5863 5999 -568 4 1203 540 0 0 0 chrX 81028650 81028710 -85621586 + (TC)n Simple_repeat Simple_repeat 1 60 0 4 1203 31 26 0 0 chrX 81028739 81028777 -85621519 + AT_rich Low_complexity Low_complexity 1 38 0 4 1203 463 73 72 12 chrX 81029222 81029305 -85620991 - ORR1A2-int LTR MaLR -1875 88 1 4 1203 1680 163 10 10 chrX 81029309 81029606 -85620690 - ORR1A2 LTR MaLR -4 323 27 4 1203 373 203 0 63 chrX 81029609 81029688 -85620608 - ORR1A2 LTR MaLR -248 79 6 4 1203 51 17 0 0 chrX 81030172 81030230 -85620066 + AT_rich Low_complexity Low_complexity 1 58 0 4 1203 235 366 24 8 chrX 81030243 81030367 -85619929 + Lx8 LINE L1 7166 7291 -182 4 1203 347 307 81 19 chrX 81030538 81030747 -85619549 - MER33 DNA MER1_type -70 254 33 5 1203 270 226 31 24 chrX 81030955 81031082 -85619214 + (TA)n Simple_repeat Simple_repeat 1 128 0 5 1203 2162 116 38 11 chrX 81031668 81032033 -85618263 - Lx LINE L1 -3 6651 6277 5 1203 21 0 0 0 chrX 81032539 81032560 -85617736 + AT_rich Low_complexity Low_complexity 1 21 0 5 1203 967 59 82 0 chrX 81032580 81032715 -85617581 + B1_Mus2 SINE Alu 1 146 -1 5 1203 260 27 27 0 chrX 81032720 81032757 -85617539 + (CAAAAA)n Simple_repeat Simple_repeat 4 41 0 5 1203 25 0 0 0 chrX 81032986 81033011 -85617285 + AT_rich Low_complexity Low_complexity 1 25 0 5 1203 277 176 27 0 chrX 81034788 81034862 -85615434 + (TA)n Simple_repeat Simple_repeat 2 77 0 5 1203 7403 76 0 4 chrX 81034981 81036280 -85614016 - L1Md_F2 LINE L1 -4 6578 5288 5 1203 8847 58 10 12 chrX 81036287 81038171 -85612125 - L1Md_F2 LINE L1 0 6582 4698 5 1203 3321 69 0 5 chrX 81038163 81038601 -85611695 + L1Md_F2 LINE L1 4236 4671 -1212 5 1203 1304 277 87 46 chrX 81038617 81039136 -85611160 + RLTR26 LTR ERVK 2 541 -101 6 1203 477 0 0 0 chrX 81039783 81039836 -85610460 + (TTCC)n Simple_repeat Simple_repeat 4 56 0 6 1203 195 125 0 0 chrX 81039849 81039889 -85610407 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1203 10802 142 32 16 chrX 81041876 81042286 -85608010 + L1_Mur1 LINE L1 2877 3304 -2582 6 1203 212 0 0 35 chrX 81042286 81042315 -85607981 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 6 1203 10802 142 32 16 chrX 81042315 81043915 -85606381 + L1_Mur1 LINE L1 3305 4917 -969 6 1203 231 36 0 0 chrX 81043974 81044002 -85606294 + (TAA)n Simple_repeat Simple_repeat 1 28 0 6 1203 2416 50 2 184 chrX 81044214 81044660 -85605636 - RLTR10B2 LTR ERVK 0 365 1 6 1203 555 314 0 90 chrX 81045491 81045695 -85604601 + B3A SINE B2 16 203 -13 6 1203 228 200 0 0 chrX 81045704 81045769 -85604527 + (CA)n Simple_repeat Simple_repeat 2 66 0 6 1203 434 326 13 17 chrX 81046728 81046880 -85603416 - ID_B1 SINE B4 -74 218 71 6 1203 181 319 51 41 chrX 81047626 81047724 -85602572 + MER5A DNA MER1_type 31 129 -60 7 1203 32 75 0 0 chrX 81047905 81047972 -85602324 + AT_rich Low_complexity Low_complexity 1 67 0 7 1203 30 59 0 0 chrX 81048035 81048086 -85602210 + AT_rich Low_complexity Low_complexity 1 51 0 7 1203 215 178 44 0 chrX 81049175 81049220 -85601076 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 7 1203 25 31 0 0 chrX 81049831 81049863 -85600433 + AT_rich Low_complexity Low_complexity 1 32 0 7 1203 220 179 0 0 chrX 81051898 81051937 -85598359 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1203 487 279 71 91 chrX 81051942 81052238 -85598058 - B4A SINE B4 0 292 3 7 1203 323 192 74 16 chrX 81053072 81053435 -85596861 + (TA)n Simple_repeat Simple_repeat 1 383 0 7 1203 42 20 0 0 chrX 81053619 81053668 -85596628 + AT_rich Low_complexity Low_complexity 1 49 0 7 1203 26 0 0 0 chrX 81053806 81053832 -85596464 + AT_rich Low_complexity Low_complexity 1 26 0 7 1203 247 243 34 51 chrX 81054594 81054772 -85595524 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 8 1203 29 78 0 0 chrX 81055366 81055430 -85594866 + AT_rich Low_complexity Low_complexity 1 64 0 8 1203 204 40 0 0 chrX 81055531 81055556 -85594740 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 8 1203 2342 274 86 91 chrX 81055572 81056106 -85594190 - Lx5 LINE L1 -54 6996 6394 8 1203 436 56 0 0 chrX 81056106 81056160 -85594136 - ORR1A3 LTR MaLR 0 326 273 8 1203 2342 274 86 91 chrX 81056160 81056204 -85594092 - Lx5 LINE L1 -54 6393 6342 8 1203 2966 117 29 2 chrX 81056204 81056659 -85593637 - Lx3A LINE L1 -2 6979 6513 8 1203 2342 274 86 91 chrX 81056659 81056987 -85593309 - Lx5 LINE L1 -709 6341 6041 8 1203 1528 50 5 0 chrX 81057323 81057521 -85592775 + L1_Mus1 LINE L1 6368 6566 -1 8 1203 226 229 0 0 chrX 81058744 81058805 -85591491 + T-rich Low_complexity Low_complexity 1 61 0 8 1203 444 82 0 0 chrX 81059339 81059400 -85590896 + (TAA)n Simple_repeat Simple_repeat 2 62 0 8 1203 348 118 0 0 chrX 81059922 81059990 -85590306 + (T)n Simple_repeat Simple_repeat 1 68 0 8 1203 407 318 31 23 chrX 81060917 81061046 -85589250 + RSINE1 SINE B4 2 131 -34 9 1203 211 343 55 45 chrX 81061111 81061221 -85589075 - MER5A DNA MER1_type -77 112 2 9 1203 30 27 0 0 chrX 81061771 81061808 -85588488 + AT_rich Low_complexity Low_complexity 1 37 0 9 1203 396 0 0 0 chrX 81062077 81062121 -85588175 + (TC)n Simple_repeat Simple_repeat 1 44 0 9 1203 255 355 123 0 chrX 81062305 81062443 -85587853 - MER90a LTR ERV1 -193 421 267 9 1203 22 35 0 0 chrX 81062486 81062515 -85587781 + AT_rich Low_complexity Low_complexity 1 29 0 9 1203 1022 110 0 14 chrX 81062593 81062741 -85587555 - B1_Mus1 SINE Alu -1 147 2 9 1203 186 178 44 0 chrX 81062841 81062886 -85587410 + L3 LINE CR1 4275 4321 -168 9 1203 26 0 0 0 chrX 81062900 81062926 -85587370 + AT_rich Low_complexity Low_complexity 1 26 0 9 1203 386 354 8 15 chrX 81063112 81063244 -85587052 - ID_B1 SINE B4 -1 223 93 9 1203 45 0 0 0 chrX 81063687 81063732 -85586564 + AT_rich Low_complexity Low_complexity 1 45 0 1 1203 501 361 3 3 chrX 81063878 81064072 -85586224 + B3A SINE B2 6 199 -17 1 1203 29 90 0 0 chrX 81064172 81064250 -85586046 + AT_rich Low_complexity Low_complexity 1 78 0 1 1203 716 20 19 19 chrX 81064841 81064945 -85585351 + (TC)n Simple_repeat Simple_repeat 2 105 0 1 1203 385 375 45 31 chrX 81064965 81065257 -85585039 - Lx8 LINE L1 -187 7286 6991 1 1203 22 56 0 0 chrX 81065410 81065446 -85584850 + AT_rich Low_complexity Low_complexity 1 36 0 1 1203 288 273 176 33 chrX 81065758 81066031 -85584265 - L1MEe LINE L1 -4541 313 2 1 1203 3376 117 51 2 chrX 81066667 81067224 -85583072 - Lx3B LINE L1 -1058 5915 5341 1 1203 33 90 0 0 chrX 81067237 81067326 -85582970 + AT_rich Low_complexity Low_complexity 1 89 0 1 1203 1734 301 19 12 chrX 81067904 81068930 -85581366 - Lx6 LINE L1 -26 7434 6092 1 1203 214 400 0 0 chrX 81068933 81069013 -85581283 + ID4_ SINE ID 2 81 -2 1 1203 2102 145 86 15 chrX 81069384 81069789 -85580507 - Lx3C LINE L1 -1 6975 6542 1 1203 1816 133 90 9 chrX 81069797 81070131 -85580165 + Lx3C LINE L1 6094 6454 -522 1 1203 24 0 0 0 chrX 81070960 81070984 -85579312 + AT_rich Low_complexity Low_complexity 1 24 0 1 1203 605 254 34 11 chrX 81071053 81071232 -85579064 - Lx8 LINE L1 -994 6479 6297 1 1203 347 269 93 25 chrX 81071236 81071354 -85578942 - Lx7 LINE L1 -1429 6267 6142 1 1203 2640 13 0 0 chrX 81071395 81071702 -85578594 - L1Md_T LINE L1 0 6582 6276 1 1203 614 306 76 5 chrX 81071974 81072158 -85578138 - B3A SINE B2 -1 197 1 1 1203 411 113 0 0 chrX 81072635 81072697 -85577599 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 1203 39 60 0 0 chrX 81073806 81073873 -85576423 + AT_rich Low_complexity Low_complexity 1 67 0 1 1203 21 0 0 0 chrX 81074449 81074470 -85575826 + AT_rich Low_complexity Low_complexity 1 21 0 1 1203 29 0 0 0 chrX 81074770 81074799 -85575497 + AT_rich Low_complexity Low_complexity 1 29 0 1 1203 363 157 0 0 chrX 81075146 81075216 -85575080 + (CA)n Simple_repeat Simple_repeat 2 71 0 1 1203 1971 201 68 3 chrX 81076174 81076559 -85573737 - MTC LTR MaLR -8 413 4 1 1203 1419 240 18 31 chrX 81076806 81077189 -85573107 - ORR1C1 LTR MaLR 0 378 1 1 1203 384 88 0 0 chrX 81077191 81077248 -85573048 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1203 279 0 0 0 chrX 81077248 81077279 -85573017 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 1203 2710 247 120 30 chrX 81078168 81078969 -85571327 - Lx7 LINE L1 -361 7335 6463 1 1203 4910 114 58 37 chrX 81079007 81079672 -85570624 - Lx2 LINE L1 0 6997 6323 1 1203 2458 94 25 33 chrX 81079672 81080034 -85570262 - RLTR10D LTR ERVK 0 359 1 1 1203 4910 114 58 37 chrX 81080034 81080205 -85570091 - Lx2 LINE L1 -675 6322 6143 1 1203 1108 262 67 13 chrX 81080231 81080701 -85569595 + ORR1D-int LTR MaLR 43 623 -957 1 1203 268 241 0 0 chrX 81080740 81080794 -85569502 + ORR1D-int LTR MaLR 847 900 -470 1 1203 2431 92 120 3 chrX 81081266 81081624 -85568672 - MTB LTR MaLR 0 400 1 1 1203 618 14 0 0 chrX 81081783 81081854 -85568442 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 1 1203 21 36 0 0 chrX 81081967 81081995 -85568301 + AT_rich Low_complexity Low_complexity 1 28 0 1 1203 230 136 23 0 chrX 81082122 81082166 -85568130 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 1203 21 0 0 0 chrX 81083073 81083094 -85567202 + AT_rich Low_complexity Low_complexity 1 21 0 1 1203 569 305 88 9 chrX 81083621 81083849 -85566447 + MER2 DNA MER2_type 38 283 -62 1 1203 395 68 0 17 chrX 81083937 81083997 -85566299 + (TTTTC)n Simple_repeat Simple_repeat 2 60 0 1 1203 21 0 0 0 chrX 81084102 81084123 -85566173 + AT_rich Low_complexity Low_complexity 1 21 0 1 1203 1148 131 22 0 chrX 81084155 81084338 -85565958 + B2_Mm2 SINE B2 1 187 -8 1 1203 206 207 35 0 chrX 81084615 81084673 -85565623 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 1 1203 241 362 0 0 chrX 81084700 81084758 -85565538 - RSINE1 SINE B4 0 165 108 1 1203 219 275 13 80 chrX 81084789 81084864 -85565432 - B4 SINE B4 -211 81 12 1 1203 1218 109 5 11 chrX 81085872 81086057 -85564239 + B2_Mm2 SINE B2 2 185 -10 1 1203 2471 191 31 12 chrX 81087153 81087671 -85562625 - RLTR11A LTR ERVK 0 528 1 1 1203 28 61 0 0 chrX 81088661 81088710 -85561586 + AT_rich Low_complexity Low_complexity 1 49 0 1 1203 574 258 60 22 chrX 81088800 81088982 -85561314 + MTD LTR MaLR 22 210 -209 1 1203 3618 263 84 25 chrX 81088982 81090053 -85560243 - Lx9 LINE L1 -216 7428 6324 1 1203 225 0 0 0 chrX 81090053 81090078 -85560218 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1203 3618 267 78 18 chrX 81090078 81090601 -85559695 - Lx9 LINE L1 -1321 6323 5631 1 1203 659 203 115 15 chrX 81090592 81090792 -85559504 + Lx9 LINE L1 7422 7641 -3 1 1203 399 219 47 9 chrX 81090804 81090910 -85559386 - Lx7 LINE L1 -8 7688 7579 1 1203 405 244 67 38 chrX 81090882 81091045 -85559251 + Lx5 LINE L1 6815 7001 -57 1 1203 425 66 16 0 chrX 81091050 81091111 -85559185 + (TAA)n Simple_repeat Simple_repeat 2 63 0 1 1203 1767 280 20 37 chrX 81091129 81091667 -85558629 - Lx6 LINE L1 -136 7324 6796 1 1203 913 327 113 24 chrX 81091968 81092473 -85557823 - Lx8 LINE L1 -1 7472 6923 1 1203 2150 112 90 32 chrX 81092822 81093199 -85557097 - RLTR9D LTR ERVK -3 400 2 1 1203 1008 133 0 0 chrX 81093199 81093379 -85556917 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1 1203 630 207 0 0 chrX 81093407 81093586 -85556710 + CT-rich Low_complexity Low_complexity 1 179 0 1 1203 1226 90 0 6 chrX 81093588 81093767 -85556529 + (TTC)n Simple_repeat Simple_repeat 1 178 0 1 1203 230 357 28 14 chrX 81093853 81093924 -85556372 - RSINE1 SINE B4 -2 163 92 1 1203 7924 137 53 12 chrX 81095858 81097221 -85553075 - Lx3A LINE L1 -3 6978 5587 1 1203 501 17 0 0 chrX 81097370 81097428 -85552868 + (TC)n Simple_repeat Simple_repeat 2 59 0 1 1203 225 0 0 0 chrX 81097428 81097452 -85552844 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1203 22 70 0 0 chrX 81098261 81098304 -85551992 + AT_rich Low_complexity Low_complexity 1 43 0 1 1203 23 33 0 0 chrX 81099934 81099964 -85550332 + AT_rich Low_complexity Low_complexity 1 30 0 1 1203 402 21 0 0 chrX 81102578 81102625 -85547671 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1203 1797 148 52 64 chrX 81103038 81103458 -85546838 - RLTR9F LTR ERVK 0 415 1 1 1203 407 125 27 14 chrX 81103459 81103532 -85546764 - RMER16-int LTR ERVK -2 7404 7331 1 1203 8060 196 64 40 chrX 81103743 81107495 -85542801 - RMER16-int LTR ERVK -1166 6240 726 1 1203 378 42 0 0 chrX 81107495 81107543 -85542753 + (TTTTA)n Simple_repeat Simple_repeat 4 51 0 1 1203 5598 258 56 3421 chrX 81107543 81107863 -85542433 - RMER16-int LTR ERVK -6324 1082 1078 1 1203 1528 176 140 24 chrX 81107865 81108237 -85542059 - RLTR9F LTR ERVK 0 415 1 1 1203 853 263 63 11 chrX 81108237 81108506 -85541790 + Lx6 LINE L1 7151 7433 -27 1 1203 22 70 0 0 chrX 81108506 81108549 -85541747 + AT_rich Low_complexity Low_complexity 1 43 0 1 1203 2348 54 3 6 chrX 81109293 81109610 -85540686 + L1_Mus2 LINE L1 6251 6566 0 1 1203 402 74 0 0 chrX 81109618 81109672 -85540624 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 1203 371 248 15 0 chrX 81109672 81109809 -85540487 - L1M2 LINE L1 -900 5243 5105 1 1203 287 263 6 68 chrX 81110505 81110668 -85539628 - L1M2 LINE L1 -1627 4516 4364 1 1203 244 125 0 30 chrX 81110841 81110907 -85539389 + A-rich Low_complexity Low_complexity 2 65 0 1 1203 322 333 7 92 chrX 81111058 81111200 -85539096 - MTEb LTR MaLR -199 180 51 1 1203 7476 72 1 0 chrX 81111780 81112767 -85537529 + L1_Mm LINE L1 4216 5203 -680 1 1203 577 262 84 45 chrX 81112767 81113075 -85537221 - RLTR46 LTR ERVK 0 320 1 1 1203 35045 194 22 9 chrX 81113108 81120633 -85529663 - IAPEY3-int LTR ERVK -363 7317 3 1 1203 689 260 34 52 chrX 81120637 81120962 -85529334 - RLTR46 LTR ERVK -1 319 1 1 1203 3048 50 16 0 chrX 81120962 81121346 -85528950 + L1Md_F2 LINE L1 5198 5587 -296 1 1203 7799 60 0 4 chrX 81121347 81122340 -85527956 + L1Md_F2 LINE L1 5589 6577 -5 1 1203 368 333 8 16 chrX 81122846 81122971 -85527325 + MTEa LTR MaLR 256 379 0 1 1203 24 0 0 0 chrX 81123718 81123742 -85526554 + AT_rich Low_complexity Low_complexity 1 24 0 1 1203 24 77 0 0 chrX 81124994 81125046 -85525250 + AT_rich Low_complexity Low_complexity 1 52 0 1 1203 195 129 0 0 chrX 81125093 81125124 -85525172 + (ATG)n Simple_repeat Simple_repeat 2 32 0 1 1203 282 333 37 28 chrX 81125125 81125233 -85525063 - PB1D10 SINE Alu -8 109 1 1 1203 21 0 0 0 chrX 81125325 81125346 -85524950 + AT_rich Low_complexity Low_complexity 1 21 0 1 1203 22 0 0 0 chrX 81125705 81125727 -85524569 + AT_rich Low_complexity Low_complexity 1 22 0 1 1203 23 68 0 0 chrX 81126029 81126073 -85524223 + AT_rich Low_complexity Low_complexity 1 44 0 1 1203 180 0 0 0 chrX 81126175 81126195 -85524101 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1203 22 0 0 0 chrX 81126344 81126366 -85523930 + AT_rich Low_complexity Low_complexity 1 22 0 1 1203 306 206 0 0 chrX 81127214 81127282 -85523014 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 1203 47 33 0 0 chrX 81127327 81127388 -85522908 + AT_rich Low_complexity Low_complexity 1 61 0 1 1203 632 232 0 0 chrX 81127631 81127756 -85522540 - ID_B1 SINE B4 0 224 100 1 1203 519 280 42 7 chrX 81127756 81127774 -85522522 - B1F SINE Alu 0 148 1 1 1203 1349 64 6 0 chrX 81127982 81128155 -85522141 + B2_Mm1t SINE B2 1 174 -19 1 1203 188 88 59 0 chrX 81128155 81128189 -85522107 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1 1203 24 53 0 0 chrX 81128570 81128608 -85521688 + AT_rich Low_complexity Low_complexity 1 38 0 1 1203 396 362 29 16 chrX 81128664 81128929 -85521367 - MLT1B LTR MaLR -11 379 92 1 1203 439 294 21 56 chrX 81129601 81129656 -85520640 + RSINE1 SINE B4 5 57 -108 1 1203 1415 135 23 16 chrX 81129656 81129912 -85520384 + L1_Mus4 LINE L1 6373 6630 -6 1 1203 439 294 21 56 chrX 81129912 81130000 -85520296 + RSINE1 SINE B4 58 143 -22 1 1203 204 200 0 0 chrX 81130031 81130101 -85520195 + (CAGA)n Simple_repeat Simple_repeat 4 73 0 1 1203 396 336 74 30 chrX 81130165 81130435 -85519861 + B4 SINE B4 1 282 -10 2 1203 263 323 23 39 chrX 81130662 81130791 -85519505 - RMER12 LTR ERVK -474 848 722 2 1203 281 256 22 89 chrX 81130857 81130947 -85519349 + MT2B LTR ERVL 156 239 -362 2 1203 627 216 66 22 chrX 81130869 81131006 -85519290 + B1_Mus1 SINE Alu 6 148 0 2 1203 476 45 0 15 chrX 81131276 81131344 -85518952 + (TTTTC)n Simple_repeat Simple_repeat 1 67 0 2 1203 3310 44 0 0 chrX 81131447 81131854 -85518442 + L1Md_F3 LINE L1 6175 6581 -3 2 1203 21 36 0 0 chrX 81132372 81132400 -85517896 + AT_rich Low_complexity Low_complexity 1 28 0 2 1204 1108 27 7 20 chrX 81133626 81133777 -85516519 + L1Md_F3 LINE L1 6433 6581 -3 2 1204 37810 30 0 0 chrX 81133965 81140609 -85509687 - L1Md_T LINE L1 0 6585 1 2 1204 737 307 83 7 chrX 81141311 81141600 -85508696 - MLT1B LTR MaLR -59 331 21 2 1204 307 242 57 118 chrX 81142000 81142211 -85508085 + RMER10A LTR ERVL 182 379 -63 2 1204 188 214 18 0 chrX 81142956 81143012 -85507284 + GA-rich Low_complexity Low_complexity 5 61 0 2 1204 8307 159 26 107 chrX 81143124 81144456 -85505840 + Lx LINE L1 4120 5265 -618 2 1204 2268 139 3 5 chrX 81144456 81144825 -85505471 - RLTR9A LTR ERVK 0 368 1 2 1204 8307 131 44 30 chrX 81144825 81145869 -85504427 + Lx LINE L1 5266 6377 -277 2 1204 2675 150 0 11 chrX 81145869 81146315 -85503981 + Lx LINE L1 6207 6647 -7 2 1204 211 329 0 14 chrX 81146351 81146422 -85503874 - MER5B DNA MER1_type -32 146 77 2 1204 37 52 0 0 chrX 81146633 81146691 -85503605 + AT_rich Low_complexity Low_complexity 1 58 0 2 1204 303 140 0 0 chrX 81147060 81147110 -85503186 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 1204 417 20 0 0 chrX 81147260 81147310 -85502986 + (CATA)n Simple_repeat Simple_repeat 1 50 0 2 1204 1913 201 105 44 chrX 81147440 81147843 -85502453 + RMER17B LTR ERVK 1 431 -527 2 1204 603 0 0 0 chrX 81147843 81147910 -85502386 + (TC)n Simple_repeat Simple_repeat 2 68 0 2 1204 1913 201 105 44 chrX 81147910 81148032 -85502264 + RMER17B LTR ERVK 432 558 -400 2 1204 306 195 98 0 chrX 81148047 81148129 -85502167 + RMER17B LTR ERVK 869 958 0 2 1204 1047 195 49 0 chrX 81148351 81148556 -85501740 - RMER6D LTR ERVK -505 215 1 2 1204 491 82 14 0 chrX 81149994 81150067 -85500229 + (TA)n Simple_repeat Simple_repeat 2 75 0 2 1204 1712 169 90 11 chrX 81150491 81150856 -85499440 - ORR1B1 LTR MaLR 0 394 1 2 1204 180 0 0 0 chrX 81151015 81151035 -85499261 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 2 1204 279 0 0 0 chrX 81151040 81151071 -85499225 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1204 1024 81 0 0 chrX 81151072 81151208 -85499088 - B1_Mus1 SINE Alu -12 136 1 2 1204 1295 101 0 10 chrX 81152740 81152941 -85497355 - L1Md_F2 LINE L1 -10 6572 6374 2 1204 252 149 0 0 chrX 81153228 81153275 -85497021 + (A)n Simple_repeat Simple_repeat 1 47 0 2 1204 186 43 0 0 chrX 81153631 81153654 -85496642 + (TC)n Simple_repeat Simple_repeat 2 24 0 2 1204 192 97 0 0 chrX 81154062 81154093 -85496203 + (TTTC)n Simple_repeat Simple_repeat 4 34 0 2 1204 24 0 0 0 chrX 81154259 81154283 -85496013 + AT_rich Low_complexity Low_complexity 1 24 0 2 1204 29 90 0 0 chrX 81154762 81154840 -85495456 + AT_rich Low_complexity Low_complexity 1 78 0 2 1204 375 181 0 0 chrX 81155053 81155125 -85495171 + (TA)n Simple_repeat Simple_repeat 2 73 0 2 1204 35 83 0 0 chrX 81155184 81155268 -85495028 + AT_rich Low_complexity Low_complexity 1 84 0 2 1204 192 63 29 73 chrX 81156166 81156234 -85494062 + T-rich Low_complexity Low_complexity 2 66 0 2 1204 333 0 0 0 chrX 81158523 81158560 -85491736 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 1204 419 341 64 12 chrX 81158862 81159034 -85491262 - MER5A DNA MER1_type -3 186 6 2 1204 216 97 0 0 chrX 81159908 81159939 -85490357 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1204 44 20 0 0 chrX 81160372 81160423 -85489873 + AT_rich Low_complexity Low_complexity 1 51 0 2 1204 24 32 0 0 chrX 81161843 81161874 -85488422 + AT_rich Low_complexity Low_complexity 1 31 0 2 1204 214 429 29 0 chrX 81162510 81162615 -85487681 - PB1D10 SINE Alu 0 117 10 2 1204 232 288 69 97 chrX 81163481 81163769 -85486527 + MER33 DNA MER1_type 39 318 -6 2 1204 35 0 0 0 chrX 81164404 81164439 -85485857 + AT_rich Low_complexity Low_complexity 1 35 0 2 1204 27 73 0 0 chrX 81164777 81164832 -85485464 + AT_rich Low_complexity Low_complexity 1 55 0 2 1204 218 95 24 0 chrX 81165358 81165400 -85484896 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 2 1204 181 167 40 40 chrX 81165631 81165681 -85484615 + L3 LINE CR1 1047 1096 -3393 2 1204 293 107 0 0 chrX 81165718 81165774 -85484522 + L1_Mus3 LINE L1 6573 6628 -10 2 1204 33 43 0 0 chrX 81165804 81165851 -85484445 + AT_rich Low_complexity Low_complexity 1 47 0 2 1204 2077 82 6 26 chrX 81165896 81166208 -85484088 - L1_Mus3 LINE L1 -2 6636 6331 2 1204 286 271 27 36 chrX 81166231 81166342 -85483954 - Lx5 LINE L1 -43 7007 6898 2 1204 35 78 0 0 chrX 81167003 81167080 -85483216 + AT_rich Low_complexity Low_complexity 1 77 0 2 1204 24 32 0 0 chrX 81167497 81167528 -85482768 + AT_rich Low_complexity Low_complexity 1 31 0 2 1204 217 191 21 0 chrX 81168384 81168431 -85481865 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 1204 619 25 0 0 chrX 81170504 81170584 -85479712 + L1Md_T LINE L1 6503 6582 0 2 1204 24 77 0 0 chrX 81172322 81172374 -85477922 + AT_rich Low_complexity Low_complexity 1 52 0 2 1204 474 317 24 38 chrX 81172460 81172673 -85477623 - B3 SINE B2 -3 213 4 2 1204 29 0 0 0 chrX 81172681 81172710 -85477586 + AT_rich Low_complexity Low_complexity 1 29 0 2 1204 29 84 0 0 chrX 81172870 81172941 -85477355 + AT_rich Low_complexity Low_complexity 1 71 0 2 1204 201 254 0 53 chrX 81173439 81173514 -85476782 + (TTGTG)n Simple_repeat Simple_repeat 5 75 0 2 1204 21 36 0 0 chrX 81174706 81174734 -85475562 + AT_rich Low_complexity Low_complexity 1 28 0 2 1204 21 0 0 0 chrX 81175248 81175269 -85475027 + AT_rich Low_complexity Low_complexity 1 21 0 2 1204 245 27 54 0 chrX 81175511 81175548 -85474748 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 1204 1071 86 0 0 chrX 81175548 81175687 -85474609 - B1_Mus1 SINE Alu -9 139 1 2 1204 1665 129 18 4 chrX 81175692 81175964 -85474332 - L1_Mus3 LINE L1 -6 6632 6357 2 1204 342 0 0 0 chrX 81176292 81176330 -85473966 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1204 23 33 0 0 chrX 81176949 81176979 -85473317 + AT_rich Low_complexity Low_complexity 1 30 0 2 1204 426 343 163 12 chrX 81178786 81179037 -85471259 + B4 SINE B4 4 292 0 2 1204 558 0 0 0 chrX 81179779 81179841 -85470455 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 1204 273 119 0 0 chrX 81179841 81179883 -85470413 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1204 606 28 0 0 chrX 81180210 81180282 -85470014 + (TCTA)n Simple_repeat Simple_repeat 1 72 0 2 1204 22 0 0 0 chrX 81180425 81180447 -85469849 + AT_rich Low_complexity Low_complexity 1 22 0 2 1204 189 256 0 0 chrX 81181450 81181489 -85468807 - L2a LINE L2 -10 3416 3378 2 1204 533 76 13 0 chrX 81182930 81183009 -85467287 + (GA)n Simple_repeat Simple_repeat 2 81 0 2 1204 678 308 87 53 chrX 81183076 81183490 -85466806 - L1_Mur3 LINE L1 -123 5757 5345 2 1204 675 37 0 0 chrX 81183490 81183572 -85466724 + (TA)n Simple_repeat Simple_repeat 1 82 0 2 1204 678 308 87 53 chrX 81183572 81183833 -85466463 - L1_Mur3 LINE L1 -536 5344 5059 2 1204 347 366 0 22 chrX 81183867 81184004 -85466292 - B1_Mm SINE Alu -9 138 5 2 1204 232 25 24 48 chrX 81184023 81184065 -85466231 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2 1204 2527 93 3 0 chrX 81184276 81184632 -85465664 - L1_Mus1 LINE L1 0 6567 6211 2 1204 1290 342 100 45 chrX 81184797 81185839 -85464457 - Lx8 LINE L1 -157 7316 6258 2 1204 556 296 77 31 chrX 81185856 81186152 -85464144 + L1M2 LINE L1 4083 4453 -1690 2 1204 822 119 82 7 chrX 81186152 81186287 -85464009 + B1_Mus1 SINE Alu 3 147 -1 2 1204 556 307 119 55 chrX 81186287 81186674 -85463622 + L1M2 LINE L1 4454 4831 -1312 2 1204 243 0 0 0 chrX 81187038 81187065 -85463231 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 1204 25 51 0 0 chrX 81189301 81189340 -85460956 + AT_rich Low_complexity Low_complexity 1 39 0 2 1204 491 0 17 0 chrX 81190367 81190426 -85459870 + (TTTTG)n Simple_repeat Simple_repeat 1 60 0 2 1204 1075 60 0 0 chrX 81190426 81190560 -85459736 - B1_Mus1 SINE Alu -13 135 2 2 1204 21 0 0 0 chrX 81190732 81190753 -85459543 + AT_rich Low_complexity Low_complexity 1 21 0 2 1204 201 158 0 0 chrX 81190866 81190904 -85459392 + A-rich Low_complexity Low_complexity 4 41 0 2 1204 21 0 0 0 chrX 81190905 81190926 -85459370 + AT_rich Low_complexity Low_complexity 1 21 0 2 1204 648 0 0 0 chrX 81192149 81192221 -85458075 + (TTC)n Simple_repeat Simple_repeat 3 74 0 2 1204 945 103 17 17 chrX 81192221 81192399 -85457897 + (TCC)n Simple_repeat Simple_repeat 3 180 0 2 1204 26 30 0 0 chrX 81193128 81193161 -85457135 + AT_rich Low_complexity Low_complexity 1 33 0 2 1204 1227 74 0 6 chrX 81193356 81193532 -85456764 - L1_Mus2 LINE L1 -3 6563 6389 2 1204 570 15 0 0 chrX 81193563 81193630 -85456666 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1204 272 231 25 25 chrX 81193635 81193715 -85456581 + GA-rich Low_complexity Low_complexity 6 85 0 2 1204 465 76 0 0 chrX 81193724 81193790 -85456506 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 1204 207 0 0 0 chrX 81193939 81193962 -85456334 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 2 1204 27 0 0 0 chrX 81194276 81194303 -85455993 + AT_rich Low_complexity Low_complexity 1 27 0 2 1204 549 267 0 0 chrX 81195172 81195348 -85454948 + (TA)n Simple_repeat Simple_repeat 1 176 0 2 1204 3157 64 2 39 chrX 81195408 81195845 -85454451 - L1_Mus1 LINE L1 0 6567 6147 2 1204 11020 77 2 3 chrX 81196817 81198296 -85452000 - L1Md_F2 LINE L1 -750 5133 3656 3 1204 3406 79 2 2 chrX 81198297 81198754 -85451542 + L1Md_F2 LINE L1 5129 5585 -298 3 1204 7692 59 0 7 chrX 81198756 81199746 -85450550 + L1Md_F2 LINE L1 5588 6570 -12 3 1204 213 39 0 0 chrX 81200835 81200861 -85449435 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 1204 28 48 0 0 chrX 81200865 81200907 -85449389 + AT_rich Low_complexity Low_complexity 1 42 0 3 1204 293 79 0 0 chrX 81201953 81201991 -85448305 - L1_Mus2 LINE L1 -319 6247 6210 3 1204 186 43 0 0 chrX 81202341 81202364 -85447932 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 3 1204 679 199 34 42 chrX 81202364 81202575 -85447721 - Lx4B LINE L1 -21 7037 6831 3 1204 204 40 0 0 chrX 81202624 81202649 -85447647 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 3 1204 484 276 0 31 chrX 81202838 81202965 -85447331 - B1_Mus1 SINE Alu -21 127 5 3 1204 182 296 0 18 chrX 81203392 81203447 -85446849 + L2a LINE L2 3334 3387 -39 3 1204 221 129 0 0 chrX 81203872 81203903 -85446393 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1204 232 127 31 16 chrX 81203918 81203982 -85446314 + (CAGA)n Simple_repeat Simple_repeat 4 68 0 3 1204 199 198 11 11 chrX 81203961 81204008 -85446288 + GA-rich Low_complexity Low_complexity 2 49 0 3 1204 411 56 0 0 chrX 81204008 81204062 -85446234 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1204 199 198 11 11 chrX 81204062 81204101 -85446195 + GA-rich Low_complexity Low_complexity 50 87 0 3 1204 486 183 6 12 chrX 81204118 81204284 -85446012 + GA-rich Low_complexity Low_complexity 2 166 0 3 1204 253 191 32 0 chrX 81204285 81204348 -85445948 + (CAGA)n Simple_repeat Simple_repeat 4 68 0 3 1204 393 22 0 0 chrX 81204350 81204396 -85445900 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1204 381 374 48 0 chrX 81204400 81204566 -85445730 - Lx8 LINE L1 -163 7310 7137 3 1204 21 0 0 0 chrX 81205036 81205057 -85445239 + AT_rich Low_complexity Low_complexity 1 21 0 3 1204 549 324 38 6 chrX 81205153 81205336 -85444960 + B3 SINE B2 28 216 0 3 1204 305 278 0 0 chrX 81205482 81205554 -85444742 - ID4_ SINE ID -10 73 2 3 1204 352 221 2 0 chrX 81205802 81205869 -85444427 + B3 SINE B2 2 69 -124 3 1204 21 0 0 0 chrX 81205950 81205971 -85444325 + AT_rich Low_complexity Low_complexity 1 21 0 3 1204 21 0 0 0 chrX 81206669 81206690 -85443606 + AT_rich Low_complexity Low_complexity 1 21 0 3 1204 221 0 0 33 chrX 81207177 81207207 -85443089 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1204 429 20 0 0 chrX 81207493 81207543 -85442753 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1204 1825 36 14 0 chrX 81208211 81208434 -85441862 + L1Md_F3 LINE L1 6344 6569 -15 3 1204 21 0 0 0 chrX 81208967 81208988 -85441308 + AT_rich Low_complexity Low_complexity 1 21 0 3 1204 1143 62 7 0 chrX 81209370 81209516 -85440780 + B1_Mus2 SINE Alu 1 147 0 3 1204 325 53 71 40 chrX 81209516 81209615 -85440681 + A-rich Low_complexity Low_complexity 2 103 0 3 1204 295 310 42 25 chrX 81209758 81209877 -85440419 - B3 SINE B2 -1 215 95 3 1204 23 54 0 0 chrX 81211222 81211259 -85439037 + AT_rich Low_complexity Low_complexity 1 37 0 3 1204 1383 93 15 0 chrX 81211263 81211467 -85438829 - L1_Mus1 LINE L1 0 6567 6361 3 1204 2102 34 0 22 chrX 81211976 81212249 -85438047 - L1Md_F3 LINE L1 0 6584 6318 3 1204 1079 45 0 0 chrX 81212249 81212381 -85437915 + L1Md_F3 LINE L1 6177 6308 -276 3 1204 6115 185 7 11 chrX 81212733 81214180 -85436116 - Lx4B LINE L1 -318 6740 5294 3 1204 740 344 82 20 chrX 81214219 81214780 -85435516 - Lx8 LINE L1 -31 7442 6847 3 1204 338 285 59 37 chrX 81214863 81214998 -85435298 + Lx7 LINE L1 6595 6732 -964 3 1204 303 204 0 0 chrX 81215092 81215146 -85435150 + Lx8 LINE L1 7286 7339 -134 3 1204 258 32 0 0 chrX 81215221 81215252 -85435044 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1204 819 64 0 0 chrX 81215252 81215361 -85434935 + (GA)n Simple_repeat Simple_repeat 1 110 0 3 1204 21 0 0 0 chrX 81215534 81215555 -85434741 + AT_rich Low_complexity Low_complexity 1 21 0 3 1204 198 273 18 0 chrX 81215555 81215610 -85434686 + MIRc SINE MIR 212 267 -1 3 1204 774 0 0 0 chrX 81216078 81216164 -85434132 + (TTC)n Simple_repeat Simple_repeat 1 86 0 3 1204 24 0 0 0 chrX 81216371 81216395 -85433901 + AT_rich Low_complexity Low_complexity 1 24 0 3 1204 886 126 24 133 chrX 81216408 81216619 -85433677 - B2_Mm2 SINE B2 -3 192 5 3 1204 233 376 79 56 chrX 81217535 81217749 -85432547 - B4A SINE B4 -73 219 1 3 1204 25 31 0 0 chrX 81219329 81219361 -85430935 + AT_rich Low_complexity Low_complexity 1 32 0 3 1204 4594 132 43 7 chrX 81219641 81220382 -85429914 - Lx2 LINE L1 -9 6988 6221 3 1204 1351 82 22 0 chrX 81222147 81222330 -85427966 - B2_Mm2 SINE B2 -7 188 2 3 1204 21 0 0 0 chrX 81222533 81222554 -85427742 + AT_rich Low_complexity Low_complexity 1 21 0 3 1204 1181 103 11 5 chrX 81222572 81222758 -85427538 - Lx LINE L1 -7 6647 6461 3 1204 569 355 24 0 chrX 81223088 81223254 -85427042 + B3A SINE B2 6 175 -23 3 1204 34 24 0 0 chrX 81223291 81223332 -85426964 + AT_rich Low_complexity Low_complexity 1 41 0 3 1204 230 318 67 60 chrX 81223341 81223475 -85426821 - LTR16A LTR ERVL -34 417 283 3 1204 21 36 0 0 chrX 81224362 81224390 -85425906 + AT_rich Low_complexity Low_complexity 1 28 0 3 1204 28 0 0 0 chrX 81224563 81224591 -85425705 + AT_rich Low_complexity Low_complexity 1 28 0 3 1204 7059 136 20 6 chrX 81225665 81227610 -85422686 - Lx LINE L1 -4 6650 4670 3 1204 537 306 28 7 chrX 81227662 81227807 -85422489 - RSINE1 SINE B4 -15 150 3 3 1204 69 0 0 0 chrX 81228031 81228100 -85422196 + AT_rich Low_complexity Low_complexity 1 69 0 3 1204 273 318 63 50 chrX 81228145 81228304 -85421992 - RSINE1 SINE B4 -2 163 3 3 1204 25 31 0 0 chrX 81228312 81228344 -85421952 + AT_rich Low_complexity Low_complexity 1 32 0 3 1204 280 43 21 21 chrX 81228831 81228878 -85421418 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 1204 27 87 0 0 chrX 81229083 81229152 -85421144 + AT_rich Low_complexity Low_complexity 1 69 0 3 1204 270 0 0 0 chrX 81229684 81229714 -85420582 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 3 1204 566 144 15 36 chrX 81229720 81229857 -85420439 - RMER17B LTR ERVK -510 448 315 3 1204 261 0 0 0 chrX 81229859 81229888 -85420408 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 3 1204 249 276 0 0 chrX 81230279 81230337 -85419959 - MER58C DNA MER1_type -9 206 149 3 1204 303 352 46 15 chrX 81230509 81230639 -85419657 + B4A SINE B4 55 188 -104 3 1204 639 333 12 55 chrX 81230676 81230930 -85419366 + B4 SINE B4 49 291 -1 3 1204 226 245 82 31 chrX 81231824 81231921 -85418375 - MTD LTR MaLR -316 103 2 3 1204 22 0 0 0 chrX 81232352 81232374 -85417922 + AT_rich Low_complexity Low_complexity 1 22 0 3 1204 333 0 0 0 chrX 81233010 81233047 -85417249 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 3 1204 888 148 0 0 chrX 81233047 81233182 -85417114 - B1_Mus1 SINE Alu -13 135 1 3 1204 26 0 0 0 chrX 81233940 81233966 -85416330 + AT_rich Low_complexity Low_complexity 1 26 0 3 1204 198 0 0 0 chrX 81235118 81235140 -85415156 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 1204 884 238 78 14 chrX 81235241 81235522 -85414774 - Lx3C LINE L1 -6 6970 6672 3 1204 536 271 113 15 chrX 81236406 81236672 -85413624 + L1MC1 LINE L1 6034 6325 -8 3 1204 272 401 105 15 chrX 81236799 81236999 -85413297 + MER20 DNA MER1_type 2 219 0 3 1204 361 296 87 19 chrX 81237008 81237215 -85413081 + HAL1 LINE L1 1216 1436 -1071 3 1204 353 327 0 9 chrX 81237325 81237433 -85412863 + MLT1F1 LTR MaLR 1 107 -462 3 1204 225 196 0 21 chrX 81237486 81237533 -85412763 + CT-rich Low_complexity Low_complexity 3 48 0 3 1204 335 384 39 34 chrX 81237816 81238021 -85412275 + MLT1F1 LTR MaLR 351 556 -13 3 1204 356 376 91 65 chrX 81238164 81238562 -85411734 - MLT1I LTR MaLR -1 410 3 3 1204 414 88 0 0 chrX 81238576 81238644 -85411652 + (TC)n Simple_repeat Simple_repeat 1 68 0 3 1204 714 145 16 24 chrX 81238809 81238936 -85411360 + B1_Mur3 SINE Alu 23 148 -1 3 1204 22 35 0 0 chrX 81239707 81239736 -85410560 + AT_rich Low_complexity Low_complexity 1 29 0 3 1204 255 313 152 8 chrX 81239915 81240047 -85410249 + MER5A DNA MER1_type 36 186 -3 3 1204 889 379 60 13 chrX 81240248 81240713 -85409583 - LTR16C LTR ERVL -2 487 1 3 1204 29 0 0 0 chrX 81242184 81242213 -85408083 + AT_rich Low_complexity Low_complexity 1 29 0 3 1204 201 143 0 45 chrX 81242576 81242620 -85407676 + T-rich Low_complexity Low_complexity 2 43 0 3 1204 4421 45 0 5 chrX 81242637 81243191 -85407105 - L1Md_F2 LINE L1 -2 6580 6030 3 1204 200 220 20 0 chrX 81243299 81243349 -85406947 + (TATATG)n Simple_repeat Simple_repeat 5 55 0 3 1204 24 32 0 0 chrX 81243400 81243431 -85406865 + AT_rich Low_complexity Low_complexity 1 31 0 3 1204 1036 103 7 0 chrX 81243596 81243742 -85406554 - B1_Mm SINE Alu 0 147 1 3 1204 328 284 0 0 chrX 81243749 81243837 -85406459 + Lx9 LINE L1 7387 7474 -170 3 1204 22 35 0 0 chrX 81243942 81243971 -85406325 + AT_rich Low_complexity Low_complexity 1 29 0 3 1204 785 206 79 0 chrX 81245965 81246154 -85404142 - Lx3C LINE L1 -2 6974 6771 3 1204 858 20 0 0 chrX 81246248 81246348 -85403948 + (TC)n Simple_repeat Simple_repeat 1 100 0 3 1204 189 0 0 0 chrX 81246348 81246368 -85403928 + (CA)n Simple_repeat Simple_repeat 1 21 0 3 1204 183 129 0 0 chrX 81246402 81246433 -85403863 + (GGA)n Simple_repeat Simple_repeat 3 33 0 3 1204 49 52 0 0 chrX 81246450 81246527 -85403769 + AT_rich Low_complexity Low_complexity 1 77 0 3 1204 566 284 84 25 chrX 81246732 81246934 -85403362 - B3 SINE B2 -1 215 2 3 1204 32 0 0 0 chrX 81247172 81247204 -85403092 + AT_rich Low_complexity Low_complexity 1 32 0 4 1204 554 226 64 8 chrX 81247557 81247682 -85402614 + ID_B1 SINE B4 84 215 -9 4 1204 1215 63 0 0 chrX 81247881 81248040 -85402256 + B2_Mm2 SINE B2 3 161 -34 4 1204 183 80 0 0 chrX 81248042 81248067 -85402229 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 4 1204 377 360 55 32 chrX 81249076 81249294 -85401002 + MER58A DNA MER1_type 1 223 -1 4 1204 284 298 32 59 chrX 81250020 81250078 -85400218 + L1M5 LINE L1 4972 5025 -1121 4 1204 3438 20 2 0 chrX 81250078 81250473 -85399823 - MTA_Mm LTR MaLR 0 396 1 4 1204 8797 42 6 1 chrX 81250473 81251566 -85398730 - MTA_Mm-int LTR MaLR 0 1098 1 4 1204 3438 20 2 0 chrX 81251566 81251961 -85398335 - MTA_Mm LTR MaLR 0 396 1 4 1204 284 298 32 59 chrX 81251961 81252271 -85398025 + L1M5 LINE L1 5026 5330 -816 4 1204 341 261 38 23 chrX 81252418 81252551 -85397745 + L1M5 LINE L1 5349 5483 -757 4 1204 242 160 0 20 chrX 81252712 81252763 -85397533 + (CAA)n Simple_repeat Simple_repeat 1 50 0 4 1204 180 0 0 0 chrX 81253925 81253945 -85396351 + (TAG)n Simple_repeat Simple_repeat 3 22 0 4 1204 369 43 0 0 chrX 81254223 81254270 -85396026 + (TC)n Simple_repeat Simple_repeat 1 47 0 4 1204 513 331 5 58 chrX 81255401 81255590 -85394706 + B3 SINE B2 1 179 -37 4 1204 261 186 0 0 chrX 81255622 81255692 -85394604 + (CA)n Simple_repeat Simple_repeat 2 71 0 4 1204 21 0 0 0 chrX 81255703 81255724 -85394572 + AT_rich Low_complexity Low_complexity 1 21 0 4 1204 6165 84 33 5 chrX 81255884 81256553 -85393743 - L1_Mus2 LINE L1 -106 6460 5788 4 1204 2851 82 7 10 chrX 81256553 81256958 -85393338 - L1Md_F2 LINE L1 -2 6580 6177 4 1204 6165 84 33 5 chrX 81256958 81257137 -85393159 - L1_Mus2 LINE L1 -779 5787 5589 4 1204 6067 91 25 2 chrX 81257140 81258009 -85392287 + L1_Mus2 LINE L1 4722 5610 -273 4 1204 3087 195 36 65 chrX 81258006 81258300 -85391996 + Lx2B LINE L1 5984 6243 -757 4 1204 201 39 0 0 chrX 81258300 81258326 -85391970 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 4 1204 3087 195 36 65 chrX 81258326 81258800 -85391496 + Lx2B LINE L1 6244 6730 -270 4 1204 6476 215 78 45 chrX 81258969 81261087 -85389209 - Lx7 LINE L1 -1647 6049 3879 4 1204 1344 228 37 5 chrX 81261084 81261459 -85388837 - Lx7 LINE L1 -3912 1968 1582 4 1204 2749 278 52 21 chrX 81261461 81262272 -85388024 - Lx6 LINE L1 0 7460 6625 4 1204 1350 318 67 18 chrX 81262273 81262872 -85387424 - Lx6 LINE L1 -945 6515 5888 4 1204 4402 51 0 2 chrX 81262933 81263482 -85386814 - L1Md_F2 LINE L1 -5 6577 6030 4 150 8396 185 43 18 chrX 81264374 81264859 -85385437 - L1_Mur3 LINE L1 -767 5113 4627 4 1205 180 0 0 0 chrX 81264859 81264879 -85385417 + (TTA)n Simple_repeat Simple_repeat 2 21 0 4 1205 8396 185 43 18 chrX 81264879 81265996 -85384300 - L1_Mur3 LINE L1 -1254 4626 3486 4 1205 216 0 0 0 chrX 81265996 81266020 -85384276 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1205 8396 185 43 18 chrX 81266020 81266300 -85383996 - L1_Mur3 LINE L1 -2395 3485 3185 4 1205 2926 88 2 2 chrX 81266306 81266705 -85383591 + MTB_Mm LTR MaLR 1 399 -8 4 1205 585 214 0 7 chrX 81266710 81266851 -85383445 - L1_Mur3 LINE L1 -3432 2448 2309 4 1205 37 52 0 0 chrX 81267274 81267332 -85382964 + AT_rich Low_complexity Low_complexity 1 58 0 4 1205 24 32 0 0 chrX 81269040 81269071 -85381225 + AT_rich Low_complexity Low_complexity 1 31 0 4 1205 26 0 0 0 chrX 81269254 81269280 -85381016 + AT_rich Low_complexity Low_complexity 1 26 0 4 1205 2911 135 38 14 chrX 81269404 81269899 -85380397 - Lx4A LINE L1 -3 7055 6549 4 1205 21 0 0 0 chrX 81270010 81270031 -85380265 + AT_rich Low_complexity Low_complexity 1 21 0 4 1205 369 0 0 0 chrX 81270567 81270608 -85379688 + (TGG)n Simple_repeat Simple_repeat 1 41 0 4 1205 199 87 65 0 chrX 81270608 81270654 -85379642 + T-rich Low_complexity Low_complexity 2 50 0 4 1205 25 31 0 0 chrX 81271512 81271544 -85378752 + AT_rich Low_complexity Low_complexity 1 32 0 4 1205 1177 28 0 0 chrX 81272143 81272285 -85378011 + B1_Mm SINE Alu 1 142 -5 4 1205 752 215 0 75 chrX 81273719 81273920 -85376376 - Lx6 LINE L1 -27 7433 7248 4 1205 501 322 14 0 chrX 81275181 81275324 -85374972 - RSINE1 SINE B4 -20 145 1 4 1205 182 333 33 16 chrX 81275391 81275452 -85374844 - L2c LINE L2 -40 3347 3286 4 1205 210 191 24 0 chrX 81276091 81276133 -85374163 + (CATA)n Simple_repeat Simple_repeat 3 45 0 4 1205 262 328 55 85 chrX 81276524 81276724 -85373572 + MER58A DNA MER1_type 28 221 -3 4 1205 321 183 179 21 chrX 81278580 81278675 -85371621 - MLT1A1 LTR MaLR 0 408 299 4 1205 447 185 0 0 chrX 81278717 81278809 -85371487 + A-rich Low_complexity Low_complexity 1 92 0 4 1205 371 158 0 0 chrX 81279004 81279061 -85371235 + Lx LINE L1 6301 6357 -640 4 1205 641 78 11 0 chrX 81279109 81279199 -85371097 - RLTR23 LTR ERV1 -330 100 10 4 1205 1222 181 42 12 chrX 81279202 81279443 -85370853 + Lx LINE L1 6407 6654 0 4 1205 334 312 10 93 chrX 81280235 81280429 -85369867 - B3A SINE B2 -17 181 4 4 1205 267 181 0 0 chrX 81280439 81280511 -85369785 + (CA)n Simple_repeat Simple_repeat 2 73 0 4 1205 482 154 161 52 chrX 81280983 81281175 -85369121 - Lx9 LINE L1 -7 7637 7425 4 1205 1834 253 34 16 chrX 81282189 81282630 -85367666 + Lx6 LINE L1 6843 7291 -169 4 1205 295 255 76 111 chrX 81283594 81283676 -85366620 + L1MA8 LINE L1 6059 6139 -152 4 1205 1064 98 7 0 chrX 81283676 81283819 -85366477 + B1_Mus2 SINE Alu 3 146 -1 4 1205 295 255 76 111 chrX 81283819 81283961 -85366335 + L1MA8 LINE L1 6140 6275 -16 4 1205 359 378 13 69 chrX 81283994 81284153 -85366143 + RSINE1 SINE B4 14 163 -2 4 1205 231 154 0 0 chrX 81284928 81284967 -85365329 - L2c LINE L2 -9 3378 3340 4 1205 538 319 145 19 chrX 81285382 81285596 -85364700 + B4 SINE B4 1 241 -51 4 1205 346 318 50 73 chrX 81285648 81285950 -85364346 - Charlie4a DNA MER1_type -168 340 46 4 1205 245 372 21 21 chrX 81285985 81286125 -85364171 - MLT1C LTR MaLR 0 390 251 4 1205 218 86 16 65 chrX 81286135 81286197 -85364099 + T-rich Low_complexity Low_complexity 2 60 0 4 1205 1878 102 125 22 chrX 81286232 81286578 -85363718 - L1Md_F2 LINE L1 -11 6571 6181 4 1205 413 294 101 48 chrX 81286613 81286820 -85363476 - MLT1C LTR MaLR -229 238 21 4 1205 3516 39 2 5 chrX 81287171 81287611 -85362685 + L1Md_F2 LINE L1 6127 6565 -17 4 1205 27 29 0 0 chrX 81287659 81287693 -85362603 + AT_rich Low_complexity Low_complexity 1 34 0 4 1205 418 313 38 15 chrX 81288016 81288149 -85362147 - B1F SINE Alu -9 140 5 4 1205 304 181 0 35 chrX 81289397 81289483 -85360813 - L1Md_F2 LINE L1 -5 6577 6495 4 1205 21 36 0 0 chrX 81289789 81289817 -85360479 + AT_rich Low_complexity Low_complexity 1 28 0 4 1205 261 0 0 0 chrX 81290265 81290294 -85360002 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1205 1346 91 16 0 chrX 81290771 81290957 -85359339 - B2_Mm2 SINE B2 -5 190 2 4 1205 329 327 9 9 chrX 81291458 81291566 -85358730 - PB1D9 SINE Alu 0 120 13 4 1205 25 31 0 0 chrX 81291783 81291815 -85358481 + AT_rich Low_complexity Low_complexity 1 32 0 4 1205 226 331 101 50 chrX 81291876 81292035 -85358261 + L3 LINE CR1 4094 4260 -229 4 1205 250 381 82 0 chrX 81293143 81293277 -85357019 - MER20 DNA MER1_type -68 151 7 4 1205 1091 211 5 14 chrX 81293629 81293840 -85356456 - B3 SINE B2 -6 210 2 4 1205 180 179 0 0 chrX 81293946 81293985 -85356311 + T-rich Low_complexity Low_complexity 2 40 0 4 1205 333 0 0 0 chrX 81294000 81294037 -85356259 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1205 342 349 66 25 chrX 81294144 81294341 -85355955 - MER58A DNA MER1_type -16 208 4 4 1205 423 0 0 0 chrX 81294726 81294773 -85355523 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1205 1022 213 46 0 chrX 81296048 81296264 -85354032 + URR1A DNA MER1_type 1 226 0 4 1205 389 338 92 19 chrX 81296556 81296763 -85353533 + B4A SINE B4 2 215 -77 4 1205 210 71 0 0 chrX 81296763 81296791 -85353505 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 4 1205 389 338 92 19 chrX 81296791 81296854 -85353442 + B4A SINE B4 216 291 -1 4 1205 202 152 43 0 chrX 81296856 81296902 -85353394 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1205 279 0 0 0 chrX 81298161 81298192 -85352104 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 1205 295 286 35 95 chrX 81298332 81298448 -85351848 - PB1D10 SINE Alu 0 117 9 4 1205 21 0 0 0 chrX 81298464 81298485 -85351811 + AT_rich Low_complexity Low_complexity 1 21 0 4 1205 383 260 17 38 chrX 81300219 81300352 -85349944 + L1_Rod LINE L1 5456 5656 -644 4 1205 291 382 20 0 chrX 81300640 81300742 -85349554 + RMER12 LTR ERVK 747 850 -472 4 1205 315 122 0 0 chrX 81300742 81300791 -85349505 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1205 392 384 52 59 chrX 81301831 81302119 -85348177 - B4 SINE B4 -6 286 1 4 1205 273 29 0 0 chrX 81302124 81302158 -85348138 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1205 492 32 0 0 chrX 81302589 81302651 -85347645 + (TC)n Simple_repeat Simple_repeat 1 62 0 4 1205 437 0 19 0 chrX 81302651 81302703 -85347593 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1205 937 100 50 0 chrX 81303033 81303173 -85347123 + B1_Mm SINE Alu 1 147 0 4 1205 479 263 38 0 chrX 81303627 81303760 -85346536 - MTE2b LTR MaLR 0 379 242 4 1205 183 184 0 0 chrX 81303771 81303809 -85346487 + (TTG)n Simple_repeat Simple_repeat 2 39 0 4 1205 5234 142 40 7 chrX 81303835 81304727 -85345569 - Lx LINE L1 -9 6645 5724 4 1205 349 183 8 154 chrX 81304727 81304850 -85345446 - B1_Mur3 SINE Alu -10 139 35 4 1205 722 296 0 6 chrX 81304860 81305040 -85345256 - MTE2b LTR MaLR -167 212 34 4 1205 852 185 43 21 chrX 81305050 81305238 -85345058 + URR1A DNA MER1_type 35 226 0 4 1205 21 71 0 0 chrX 81305305 81305347 -85344949 + AT_rich Low_complexity Low_complexity 1 42 0 4 1205 1630 151 3 111 chrX 81305739 81306098 -85344198 - ORR1A2 LTR MaLR -7 320 1 4 1205 30 59 0 0 chrX 81306215 81306266 -85344030 + AT_rich Low_complexity Low_complexity 1 51 0 4 1205 275 315 11 0 chrX 81306383 81306472 -85343824 - Lx6 LINE L1 -59 7401 7312 4 1205 2086 97 27 0 chrX 81306466 81306766 -85343530 + L1_Mus3 LINE L1 6311 6618 -20 4 1205 1637 253 28 50 chrX 81306771 81307171 -85343125 - Lx6 LINE L1 -155 7305 6915 4 1205 549 114 61 9 chrX 81307178 81307293 -85343003 + L1_Mus4 LINE L1 6516 6636 0 4 1205 4228 52 33 2 chrX 81307583 81308126 -85342170 - LTRIS2 LTR ERV1 0 564 5 4 1205 206 182 44 29 chrX 81308409 81308457 -85341839 + T-rich Low_complexity Low_complexity 21 70 0 4 1205 470 281 58 0 chrX 81308457 81308596 -85341700 - B1_Mm SINE Alu 0 147 1 4 1205 206 182 44 29 chrX 81308596 81308615 -85341681 + T-rich Low_complexity Low_complexity 2 20 0 5 1205 38 0 0 0 chrX 81308627 81308665 -85341631 + AT_rich Low_complexity Low_complexity 1 38 0 5 1205 201 250 0 0 chrX 81309025 81309073 -85341223 + GA-rich Low_complexity Low_complexity 2 49 0 5 1205 21 0 0 0 chrX 81311612 81311633 -85338663 + AT_rich Low_complexity Low_complexity 1 21 0 5 1205 296 375 20 38 chrX 81312255 81312448 -85337848 - MIRb SINE MIR -57 211 14 5 1205 228 286 63 0 chrX 81312716 81312779 -85337517 + Tigger16b DNA Tigger 271 337 0 5 1205 221 283 0 0 chrX 81313063 81313116 -85337180 - L2b LINE L2 0 3375 3323 5 1205 621 327 19 0 chrX 81313174 81313336 -85336960 + B3 SINE B2 47 211 -5 5 1205 227 311 0 0 chrX 81313382 81313456 -85336840 + ID2 SINE ID 1 74 -9 5 1205 203 255 0 0 chrX 81314412 81314459 -85335837 + CT-rich Low_complexity Low_complexity 2 48 0 5 1205 16869 76 17 0 chrX 81315009 81317323 -85332973 - L1_Mm LINE L1 -477 5406 3054 5 1205 1442 181 0 0 chrX 81317318 81317567 -85332729 - L1Md_F LINE L1 -5988 531 283 5 1205 291 163 20 0 chrX 81317585 81317634 -85332662 + MTEa LTR MaLR 320 369 -10 5 1205 36 0 0 0 chrX 81318347 81318383 -85331913 + AT_rich Low_complexity Low_complexity 1 36 0 5 1205 206 203 19 0 chrX 81318651 81318707 -85331589 + L2c LINE L2 3348 3422 -4 5 1205 275 340 9 19 chrX 81318866 81318974 -85331322 - MER5A1 DNA MER1_type -57 109 3 5 1205 413 214 120 15 chrX 81319190 81319323 -85330973 - B1_Mur3 SINE Alu -2 147 1 5 1205 1964 103 21 63 chrX 81319594 81319927 -85330369 - ORR1A3 LTR MaLR -7 319 1 5 1205 21 36 0 0 chrX 81320365 81320393 -85329903 + AT_rich Low_complexity Low_complexity 1 28 0 5 1205 288 0 0 0 chrX 81322852 81322884 -85327412 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 1205 330 26 0 0 chrX 81324262 81324301 -85325995 + (TC)n Simple_repeat Simple_repeat 2 40 0 5 1205 207 114 0 0 chrX 81324302 81324337 -85325959 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1205 235 206 0 81 chrX 81324475 81324549 -85325747 + GA-rich Low_complexity Low_complexity 1 68 0 5 1205 395 350 88 84 chrX 81325232 81325516 -85324780 + B4A SINE B4 2 286 -6 5 1205 342 0 0 0 chrX 81325531 81325569 -85324727 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1205 734 135 150 25 chrX 81326392 81326552 -85323744 - Lx LINE L1 -9 6645 6466 5 1205 212 167 24 0 chrX 81326814 81326856 -85323440 + CT-rich Low_complexity Low_complexity 2 44 0 5 1205 185 303 62 50 chrX 81327571 81327651 -85322645 + MIR SINE MIR 138 218 -44 5 1205 1748 248 165 12 chrX 81328031 81328607 -85321689 - Lx6 LINE L1 -7 7453 6790 5 1205 219 88 0 0 chrX 81329006 81329040 -85321256 + (TAAAAA)n Simple_repeat Simple_repeat 6 39 0 5 1205 229 361 30 20 chrX 81329283 81329382 -85320914 + Lx8 LINE L1 7176 7275 -198 5 1205 23 54 0 0 chrX 81329505 81329542 -85320754 + AT_rich Low_complexity Low_complexity 1 37 0 5 1205 250 326 11 11 chrX 81329958 81330051 -85320245 + L1MC5 LINE L1 7790 7882 -79 5 1205 22 35 0 0 chrX 81330176 81330205 -85320091 + AT_rich Low_complexity Low_complexity 1 29 0 5 1205 673 369 40 0 chrX 81330262 81330514 -85319782 - MTEa LTR MaLR -80 299 38 5 1205 186 43 0 0 chrX 81330754 81330777 -85319519 + (ATG)n Simple_repeat Simple_repeat 2 24 0 5 1205 255 61 0 0 chrX 81331570 81331603 -85318693 + (TCCC)n Simple_repeat Simple_repeat 3 35 0 5 1205 33 0 0 0 chrX 81332146 81332179 -85318117 + AT_rich Low_complexity Low_complexity 1 33 0 5 1205 188 200 20 0 chrX 81335056 81335106 -85315190 + GA-rich Low_complexity Low_complexity 2 52 0 5 1205 414 69 0 0 chrX 81335168 81335226 -85315070 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1205 26 50 0 0 chrX 81335876 81335916 -85314380 + AT_rich Low_complexity Low_complexity 1 40 0 5 1205 414 0 0 0 chrX 81336649 81336695 -85313601 + (TC)n Simple_repeat Simple_repeat 2 47 0 5 1205 361 365 44 30 chrX 81336756 81337027 -85313269 - L1MD2 LINE L1 -17 6342 6068 5 1205 403 264 116 0 chrX 81338089 81338218 -85312078 + B1F2 SINE Alu 1 144 -5 5 1205 1148 55 7 0 chrX 81338546 81338692 -85311604 + B1_Mus2 SINE Alu 1 147 0 5 1205 204 67 0 0 chrX 81339081 81339111 -85311185 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1205 397 306 149 48 chrX 81339993 81340161 -85310135 + B3A SINE B2 14 198 0 5 1205 27 49 0 0 chrX 81340498 81340539 -85309757 + AT_rich Low_complexity Low_complexity 1 41 0 5 1205 907 62 23 15 chrX 81341332 81341462 -85308834 - B1_Mm SINE Alu -16 131 1 5 1205 2227 82 6 3 chrX 81341462 81341781 -85308515 + L1_Mus3 LINE L1 6313 6632 -6 5 1205 440 366 96 45 chrX 81341784 81342202 -85308094 - L2 LINE L2 -829 2590 2152 5 1205 363 325 81 43 chrX 81342614 81342823 -85307473 + MIRc SINE MIR 7 223 -45 5 1205 206 344 65 19 chrX 81343659 81343813 -85306483 - L2a LINE L2 -37 3389 3229 5 1205 610 296 117 37 chrX 81344171 81344736 -85305560 - L1MA4 LINE L1 -126 6174 5565 5 1205 462 323 13 23 chrX 81344916 81345220 -85305076 - L1MA4 LINE L1 -868 5275 4975 5 1205 34 65 0 0 chrX 81345404 81345466 -85304830 + AT_rich Low_complexity Low_complexity 1 62 0 5 1205 207 0 0 0 chrX 81345596 81345619 -85304677 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 1205 21 36 0 0 chrX 81347224 81347252 -85303044 + AT_rich Low_complexity Low_complexity 1 28 0 5 1205 398 268 97 17 chrX 81347258 81347433 -85302863 - Lx6 LINE L1 -28 7432 7244 5 1205 1806 258 47 35 chrX 81348140 81348710 -85301586 - MER67B LTR ERV1 -84 577 1 5 1205 21 36 0 0 chrX 81348881 81348909 -85301387 + AT_rich Low_complexity Low_complexity 1 28 0 5 1205 215 160 20 0 chrX 81348989 81349039 -85301257 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 5 1205 592 157 25 0 chrX 81349169 81349290 -85301006 + L1_Mus3 LINE L1 6508 6631 -7 5 1205 1188 288 60 18 chrX 81349975 81350360 -85299936 - MTD LTR MaLR -5 414 14 5 1205 204 369 56 45 chrX 81351900 81352079 -85298217 + MIRb SINE MIR 73 253 -15 5 1205 249 33 0 0 chrX 81354612 81354642 -85295654 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1205 386 410 11 11 chrX 81356408 81356593 -85293703 - MER5A DNA MER1_type -1 188 4 5 1205 204 40 0 0 chrX 81356632 81356657 -85293639 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1205 3652 182 13 1 chrX 81356737 81357420 -85292876 - L1_Mur3 LINE L1 -747 5133 4443 5 1205 1061 92 92 6 chrX 81358014 81358036 -85292260 - B2_Mm2 SINE B2 -5 190 163 5 1205 198 0 0 0 chrX 81358036 81358058 -85292238 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 1205 1061 92 92 6 chrX 81358058 81358209 -85292087 - B2_Mm2 SINE B2 -33 162 2 5 1205 1458 243 90 5 chrX 81358225 81358671 -85291625 - Lx2B LINE L1 -13 6987 6504 5 1205 5520 40 0 0 chrX 81359298 81359967 -85290329 - L1Md_T LINE L1 -1 6581 5913 5 1205 511 359 11 6 chrX 81360357 81360539 -85289757 + MER5A DNA MER1_type 7 189 0 5 1205 31 26 0 0 chrX 81361343 81361381 -85288915 + AT_rich Low_complexity Low_complexity 1 38 0 5 1205 3634 273 25 18 chrX 81362396 81363350 -85286946 + Lx5 LINE L1 6083 7043 -7 5 1205 441 317 82 5 chrX 81363356 81363540 -85286756 + ID_B1 SINE B4 22 219 -5 5 1205 269 218 217 39 chrX 81363547 81363676 -85286620 + RLTR25A LTR ERVK 431 582 -521 5 1205 861 80 0 0 chrX 81363599 81363712 -85286584 + B1_Mus1 SINE Alu 28 140 -8 5 1205 233 395 41 0 chrX 81363867 81364014 -85286282 + Lx8 LINE L1 7185 7337 -136 5 1205 387 146 60 40 chrX 81364256 81364356 -85285940 + Lx7 LINE L1 7595 7696 0 5 1205 2920 56 3 3 chrX 81365518 81365892 -85284404 - L1Md_F2 LINE L1 -12 6570 6197 5 1205 216 304 0 0 chrX 81366349 81366428 -85283868 + T-rich Low_complexity Low_complexity 2 80 0 5 1205 456 333 52 0 chrX 81366429 81366582 -85283714 - RSINE1 SINE B4 0 165 5 5 1205 562 357 57 34 chrX 81367008 81367362 -85282934 + MLT2B4 LTR ERVL 1 362 -194 5 1205 195 129 0 0 chrX 81367507 81367538 -85282758 + (A)n Simple_repeat Simple_repeat 1 31 0 5 1205 23 0 0 0 chrX 81370228 81370251 -85280045 + AT_rich Low_complexity Low_complexity 1 23 0 5 1205 7793 90 33 24 chrX 81370260 81371454 -85278842 - Lx3_Mus LINE L1 0 7009 5806 5 1205 4140 113 5 5 chrX 81371454 81372070 -85278226 + Lx3_Mus LINE L1 5188 5803 -83 5 1205 201 236 0 35 chrX 81372086 81372143 -85278153 + (CATA)n Simple_repeat Simple_repeat 4 58 0 5 1205 1128 55 7 0 chrX 81373476 81373622 -85276674 + B1_Mus2 SINE Alu 1 147 0 5 1205 327 49 0 0 chrX 81373622 81373663 -85276633 + (A)n Simple_repeat Simple_repeat 1 41 0 5 1205 23 33 0 0 chrX 81373822 81373852 -85276444 + AT_rich Low_complexity Low_complexity 1 30 0 5 1205 235 246 18 0 chrX 81373944 81374024 -85276272 + (TATATG)n Simple_repeat Simple_repeat 1 81 0 5 1205 315 0 0 0 chrX 81374561 81374596 -85275700 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1205 40561 11 2 6 chrX 81375503 81381881 -85268415 - L1Md_A LINE L1 0 6582 232 5 1205 246 369 52 32 chrX 81381918 81382072 -85268224 - MTE-int LTR MaLR -654 926 770 5 1205 1085 124 11 0 chrX 81382311 81382489 -85267807 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 1205 189 0 0 0 chrX 81382489 81382510 -85267786 + (GGAA)n Simple_repeat Simple_repeat 1 21 0 5 1205 673 68 9 19 chrX 81382558 81382663 -85267633 + (TTCTC)n Simple_repeat Simple_repeat 3 106 0 5 1205 225 339 7 66 chrX 81382663 81382799 -85267497 - RMER4B LTR ERVK -29 556 429 5 1205 345 188 0 0 chrX 81382803 81382888 -85267408 + GA-rich Low_complexity Low_complexity 4 88 0 5 1205 288 0 0 0 chrX 81383822 81383854 -85266442 + (TTA)n Simple_repeat Simple_repeat 2 33 0 6 1205 1511 160 7 25 chrX 81383854 81384130 -85266166 - Lx4A LINE L1 -5 7053 6783 6 1205 382 156 62 0 chrX 81384131 81384195 -85266101 + B1_Mur2 SINE Alu 80 147 -2 6 1205 201 167 0 0 chrX 81384195 81384231 -85266065 + (CAA)n Simple_repeat Simple_repeat 1 36 0 6 1205 189 109 36 18 chrX 81384807 81384863 -85265433 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 6 1205 2239 235 68 90 chrX 81384867 81385674 -85264622 - Lx7 LINE L1 -25 7671 6914 6 1205 475 343 11 55 chrX 81385989 81386171 -85264125 + B3 SINE B2 43 216 0 6 1205 2670 120 12 5 chrX 81386257 81386660 -85263636 + Lx4A LINE L1 6533 6938 -120 6 1205 294 29 0 0 chrX 81386661 81386696 -85263600 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1205 219 88 0 0 chrX 81386779 81386813 -85263483 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1205 186 273 76 43 chrX 81387629 81387721 -85262575 + MIRb SINE MIR 171 265 -3 6 1205 413 327 51 29 chrX 81388032 81388330 -85261966 - MER34A1 LTR ERV1 -3 568 262 6 1205 195 42 0 0 chrX 81388829 81388853 -85261443 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6 1205 735 284 9 13 chrX 81389131 81389310 -85260986 + B3 SINE B2 30 206 -10 6 1205 228 297 0 0 chrX 81389663 81389737 -85260559 - L1ME3A LINE L1 -188 5985 5912 6 1205 33 66 0 0 chrX 81389737 81389798 -85260498 + AT_rich Low_complexity Low_complexity 1 61 0 6 1205 220 304 29 14 chrX 81390017 81390087 -85260209 - MER5A DNA MER1_type -21 168 98 6 1205 979 45 0 15 chrX 81390474 81390609 -85259687 + L1Md_F2 LINE L1 6435 6567 -15 6 1205 600 198 109 48 chrX 81390622 81390787 -85259509 + RMER10B LTR ERVL 178 352 -46 6 1205 613 154 24 0 chrX 81390819 81390942 -85259354 + GA-rich Low_complexity Low_complexity 3 128 0 6 1205 1028 282 37 14 chrX 81391413 81391762 -85258534 - ORR1E LTR MaLR -2 357 1 6 1205 395 312 102 5 chrX 81392159 81392346 -85257950 - Cheshire DNA MER1_type -2133 287 83 6 1205 1478 264 70 13 chrX 81392460 81392848 -85257448 - MTD LTR MaLR 0 419 10 6 1205 673 266 33 19 chrX 81392913 81393124 -85257172 - B3 SINE B2 -2 214 1 6 1205 422 125 0 0 chrX 81394621 81394693 -85255603 + L1_Mus2 LINE L1 6493 6564 -2 6 1205 23 0 0 0 chrX 81394697 81394720 -85255576 + AT_rich Low_complexity Low_complexity 1 23 0 6 1205 22 0 0 0 chrX 81395280 81395302 -85254994 + AT_rich Low_complexity Low_complexity 1 22 0 6 1206 239 277 0 44 chrX 81396046 81396114 -85254182 - B1_Mur1 SINE Alu -7 142 78 6 1206 207 100 0 0 chrX 81396740 81396770 -85253526 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 1206 25 0 0 0 chrX 81397629 81397654 -85252642 + AT_rich Low_complexity Low_complexity 1 25 0 6 1206 23 78 0 0 chrX 81397980 81398031 -85252265 + AT_rich Low_complexity Low_complexity 1 51 0 6 1206 23 68 0 0 chrX 81398642 81398686 -85251610 + AT_rich Low_complexity Low_complexity 1 44 0 6 1206 37977 31 1 0 chrX 81398686 81405897 -85244399 - L1Md_T LINE L1 0 6585 1 6 1206 2906 63 2 30 chrX 81405898 81406293 -85244003 - L1_Mus2 LINE L1 -9 6557 6174 6 1206 326 316 61 10 chrX 81406653 81406752 -85243544 + B1F2 SINE Alu 5 108 -41 6 1206 534 57 0 0 chrX 81406752 81406822 -85243474 + (CA)n Simple_repeat Simple_repeat 2 71 0 6 1206 213 154 0 0 chrX 81406849 81406888 -85243408 + (CCA)n Simple_repeat Simple_repeat 3 41 0 6 1206 193 312 52 52 chrX 81406967 81407105 -85243191 - MIRm SINE MIR -93 183 49 6 1206 219 347 0 40 chrX 81409340 81409415 -85240881 - L2c LINE L2 -65 3322 3251 6 1206 1703 122 3 21 chrX 81410044 81410328 -85239968 - Lx2 LINE L1 -39 6958 6680 6 1206 182 105 26 0 chrX 81410873 81410911 -85239385 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 1206 21 57 0 0 chrX 81412253 81412288 -85238008 + AT_rich Low_complexity Low_complexity 1 35 0 6 1206 21 36 0 0 chrX 81412555 81412583 -85237713 + AT_rich Low_complexity Low_complexity 1 28 0 6 1206 219 88 0 0 chrX 81413060 81413094 -85237202 + (TTA)n Simple_repeat Simple_repeat 2 35 0 6 1206 3488 273 50 31 chrX 81413094 81414092 -85236204 - Lx5 LINE L1 -10 7040 5989 6 1206 21 0 0 0 chrX 81414361 81414382 -85235914 + AT_rich Low_complexity Low_complexity 1 21 0 6 1206 26 30 0 0 chrX 81414402 81414435 -85235861 + AT_rich Low_complexity Low_complexity 1 33 0 6 1206 270 0 0 0 chrX 81415022 81415052 -85235244 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 1206 802 131 34 27 chrX 81415446 81415595 -85234701 + L1Md_F2 LINE L1 6421 6570 -12 6 1206 248 223 117 67 chrX 81416782 81416902 -85233394 - Lx4B LINE L1 -4 7054 6929 6 1206 880 101 13 26 chrX 81417415 81417568 -85232728 - L1_Mus3 LINE L1 -12 6626 6476 6 1206 22 94 0 0 chrX 81417587 81417651 -85232645 + AT_rich Low_complexity Low_complexity 1 64 0 6 1206 30 0 0 0 chrX 81418614 81418644 -85231652 + AT_rich Low_complexity Low_complexity 1 30 0 6 1206 493 282 8 16 chrX 81420164 81420290 -85230006 - B1_Mur2 SINE Alu -21 128 4 6 1206 264 267 71 55 chrX 81420835 81420962 -85229334 + Tigger1 DNA MER2_type 955 1083 -1335 6 1206 779 291 8 4 chrX 81421159 81421397 -85228899 + Lx9 LINE L1 7239 7477 -167 6 1206 288 53 0 0 chrX 81421432 81421470 -85228826 + (GA)n Simple_repeat Simple_repeat 1 38 0 6 1206 272 313 46 66 chrX 81421970 81422142 -85228154 + MIRb SINE MIR 29 183 -25 6 1206 216 0 0 0 chrX 81424212 81424236 -85226060 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1206 1382 232 24 82 chrX 81424333 81424507 -85225789 - RodERV21-int LTR ERV1 -2273 2718 2553 6 1206 3534 10 2 0 chrX 81424507 81424902 -85225394 - MTA_Mm LTR MaLR 0 396 1 6 1206 1382 232 24 82 chrX 81424902 81425140 -85225156 - RodERV21-int LTR ERV1 -2439 2552 2330 6 1206 3624 159 54 55 chrX 81425140 81426207 -85224089 - RLTR13D1 LTR ERVK 0 1023 1 6 1206 4583 283 41 55 chrX 81426207 81427836 -85222460 - RodERV21-int LTR ERV1 -2656 2335 730 6 1206 3792 86 6 2 chrX 81428040 81428551 -85221745 - L1_Mus2 LINE L1 0 6566 6054 6 1206 3820 72 2 1 chrX 81428551 81429189 -85221107 + L1_Mus2 LINE L1 5432 6069 -497 6 1206 5886 231 142 12 chrX 81431271 81433174 -85217122 - Lx6 LINE L1 -5 7455 5324 6 1206 357 314 51 45 chrX 81433537 81433714 -85216582 - RLTR18B LTR ERVK -94 418 241 6 1206 6376 21 1 24 chrX 81433714 81434120 -85216176 - MERVL-int LTR ERVL -4740 745 351 6 1206 3821 36 49 0 chrX 81434120 81434588 -85215708 - L1Md_T LINE L1 0 6582 6092 6 1206 6376 21 1 24 chrX 81434588 81434943 -85215353 - MERVL-int LTR ERVL -5135 350 1 6 1206 4193 25 12 2 chrX 81434943 81435431 -85214865 - MT2_Mm LTR ERVL 0 493 1 6 1206 802 243 33 11 chrX 81435431 81435614 -85214682 - RLTR18B LTR ERVK -269 243 57 6 1206 1502 231 15 66 chrX 81435809 81436203 -85214093 - ORR1D1 LTR MaLR 0 374 1 6 1206 421 256 8 8 chrX 81436949 81437067 -85213229 + RMER1C Other Other 472 589 -753 6 1206 1625 315 58 34 chrX 81437487 81438216 -85212080 - Lx8 LINE L1 -9 7464 6719 6 1206 34 0 0 0 chrX 81438290 81438324 -85211972 + AT_rich Low_complexity Low_complexity 1 34 0 6 1206 570 219 146 15 chrX 81438329 81438459 -85211837 - B1_Mur3 SINE Alu -2 147 1 6 1206 562 325 192 26 chrX 81438461 81438875 -85211421 - Lx8 LINE L1 -755 6718 6236 6 1206 24 85 0 0 chrX 81438903 81438962 -85211334 + AT_rich Low_complexity Low_complexity 1 59 0 6 1206 3074 228 39 9 chrX 81439454 81440130 -85210166 - Lx5 LINE L1 -4 7046 6351 6 1206 414 248 68 15 chrX 81440192 81440323 -85209973 + B1F SINE Alu 9 144 -5 6 1206 23 0 0 0 chrX 81440412 81440435 -85209861 + AT_rich Low_complexity Low_complexity 1 23 0 6 1206 394 344 65 20 chrX 81440809 81441008 -85209288 - MER115 DNA Tip100 -7 686 479 6 1206 365 318 0 0 chrX 81441101 81441211 -85209085 - L1MB1 LINE L1 -63 6105 5996 6 1206 2284 163 41 19 chrX 81441271 81441683 -85208613 + MTC LTR MaLR 1 421 0 6 1206 958 163 0 50 chrX 81441683 81441864 -85208432 + MTC-int LTR MaLR 3 174 -1084 6 1206 334 123 18 0 chrX 81441878 81441935 -85208361 + MTC LTR MaLR 356 413 -8 6 1206 307 219 0 0 chrX 81443080 81443144 -85207152 - L1_Mur3 LINE L1 -810 5070 5007 6 1206 2334 247 59 39 chrX 81443213 81444035 -85206261 - L1_Mur3 LINE L1 -3776 2104 1269 6 1206 309 26 0 0 chrX 81444035 81444073 -85206223 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1206 2334 301 63 32 chrX 81444073 81444494 -85205802 - L1_Mur3 LINE L1 -6460 1268 840 6 1206 213 299 39 0 chrX 81446215 81446292 -85204004 - MIRc SINE MIR -1 267 188 6 1206 321 253 72 78 chrX 81446585 81446752 -85203544 + MER3 DNA MER1_type 11 176 -33 6 1206 203 170 0 21 chrX 81446756 81446804 -85203492 + (TA)n Simple_repeat Simple_repeat 2 48 0 6 1206 581 311 28 14 chrX 81447329 81447511 -85202785 - B3A SINE B2 -10 185 2 6 1206 5086 79 1 0 chrX 81447537 81448266 -85202030 - L1_Mus1 LINE L1 0 6567 5887 6 1206 297 0 0 0 chrX 81449429 81449462 -85200834 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1206 222 37 0 0 chrX 81449462 81449488 -85200808 + (TA)n Simple_repeat Simple_repeat 1 27 0 6 1206 574 88 8 31 chrX 81449604 81449733 -85200563 + (TA)n Simple_repeat Simple_repeat 1 126 0 6 1206 1394 201 65 0 chrX 81449733 81450026 -85200270 - L1_Mur2 LINE L1 -217 5660 5349 6 1206 28743 89 12 3 chrX 81450019 81451244 -85199052 - L1_Mus2 LINE L1 0 6566 5294 6 1206 6911 39 1 0 chrX 81451244 81452082 -85198214 - L1Md_A LINE L1 -2 6580 5742 6 1206 28743 144 32 39 chrX 81452082 81457232 -85193064 - L1_Mus2 LINE L1 -590 5293 220 6 1206 564 188 23 0 chrX 81457263 81457396 -85192900 - L1_Mur2 LINE L1 -530 5347 5212 6 1206 1319 202 11 11 chrX 81457404 81457674 -85192622 + Lx4B LINE L1 6772 7041 -17 6 1206 227 309 103 39 chrX 81457722 81457877 -85192419 - MER33 DNA MER1_type -135 189 25 6 1206 1575 89 42 0 chrX 81457877 81458091 -85192205 + L1_Mur2 LINE L1 5472 5694 -183 6 1206 6520 161 29 12 chrX 81458091 81459283 -85191013 + Lx4A LINE L1 5846 7058 0 6 1206 372 286 98 21 chrX 81459674 81459817 -85190479 + MLT1B LTR MaLR 1 154 -236 6 1206 223 360 191 0 chrX 81461003 81461150 -85189146 + MER5A DNA MER1_type 10 184 -5 6 1206 262 268 29 58 chrX 81461170 81461273 -85189023 + MER5A1 DNA MER1_type 38 137 -29 6 1206 1859 57 0 0 chrX 81462789 81463019 -85187277 - L1_Mus1 LINE L1 -620 5947 5718 6 1206 4730 72 10 0 chrX 81463019 81463643 -85186653 + L1_Mus1 LINE L1 5938 6567 0 6 1206 1276 279 90 12 chrX 81463771 81464181 -85186115 - Lx6 LINE L1 -387 7073 6632 7 1206 242 250 147 0 chrX 81465327 81465395 -85184901 + ID2 SINE ID 2 79 -4 7 1206 531 0 0 0 chrX 81465998 81466057 -85184239 + (TA)n Simple_repeat Simple_repeat 1 59 0 7 1206 955 46 23 0 chrX 81466057 81466188 -85184108 - L1Md_F3 LINE L1 -25 6559 6426 7 1206 270 270 111 11 chrX 81466982 81467072 -85183224 - L2c LINE L2 -44 3343 3245 7 1206 408 40 0 0 chrX 81469272 81469322 -85180974 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 1206 1009 292 23 13 chrX 81469976 81470285 -85180011 + Lx6 LINE L1 7143 7454 -6 7 1206 189 0 0 0 chrX 81472379 81472400 -85177896 + (TG)n Simple_repeat Simple_repeat 2 22 0 7 1206 549 0 0 0 chrX 81473016 81473077 -85177219 + (TTCTC)n Simple_repeat Simple_repeat 2 62 0 7 1206 360 111 0 0 chrX 81473077 81473131 -85177165 + (TTCC)n Simple_repeat Simple_repeat 2 55 0 7 1206 384 222 40 10 chrX 81473352 81473452 -85176844 - Lx9 LINE L1 -236 7408 7306 7 1206 2828 222 90 46 chrX 81473438 81473503 -85176793 - Lx9 LINE L1 -656 6988 6922 7 1206 474 261 63 35 chrX 81473503 81473635 -85176661 + B1_Mus2 SINE Alu 1 137 -10 7 1206 207 100 0 0 chrX 81473635 81473665 -85176631 + (CAAG)n Simple_repeat Simple_repeat 2 31 0 7 1206 2828 216 64 39 chrX 81473675 81474952 -85175344 - Lx9 LINE L1 -723 6921 5462 7 1206 326 329 137 19 chrX 81475078 81475239 -85175057 + Tigger5 DNA MER2_type 2 181 -2225 7 1206 404 245 11 0 chrX 81475291 81475385 -85174911 + Tigger5 DNA MER2_type 2293 2387 -19 7 1206 3001 54 25 5 chrX 81475978 81476371 -85173925 + L1Md_F2 LINE L1 6181 6581 -1 7 1206 272 216 11 64 chrX 81477424 81477518 -85172778 + GA-rich Low_complexity Low_complexity 3 91 0 7 1206 184 194 0 0 chrX 81480392 81480423 -85169873 - MER5B DNA MER1_type -2 176 146 7 1206 924 70 7 14 chrX 81480436 81480580 -85169716 + (GGAA)n Simple_repeat Simple_repeat 3 145 0 7 1206 1826 188 107 20 chrX 81480590 81481131 -85169165 + RMER6C LTR ERVK 1 690 0 7 1206 543 56 0 0 chrX 81481134 81481205 -85169091 + (GA)n Simple_repeat Simple_repeat 1 71 0 7 1206 226 125 0 40 chrX 81481205 81481255 -85169041 + GA-rich Low_complexity Low_complexity 2 49 0 7 1206 966 251 68 52 chrX 81481495 81481911 -85168385 - MT2A LTR ERVL -48 553 1 7 1206 1868 59 0 0 chrX 81482087 81482326 -85167970 + L1_Mus1 LINE L1 6328 6566 -1 7 1206 803 118 86 75 chrX 81483053 81483227 -85167069 - Lx3A LINE L1 0 6981 6806 7 1206 1048 116 0 6 chrX 81483257 81483431 -85166865 - L1_Mus4 LINE L1 -4 6632 6460 7 1206 1190 96 0 0 chrX 81483431 81483598 -85166698 + L1_Mus4 LINE L1 6254 6420 -216 7 1206 1103 107 89 16 chrX 81483598 81483788 -85166508 - RMER19B LTR ERVK -31 871 668 7 1206 617 206 55 8 chrX 81483782 81483909 -85166387 - RMER19B LTR ERVK -769 133 1 7 1206 342 273 0 0 chrX 81484738 81484815 -85165481 + MTC LTR MaLR 1 77 -344 7 1206 541 238 119 28 chrX 81484812 81484989 -85165307 + MTC LTR MaLR 229 421 0 7 1206 312 18 53 35 chrX 81485561 81485618 -85164678 + (CAAA)n Simple_repeat Simple_repeat 1 58 0 7 1206 416 303 0 32 chrX 81488359 81488485 -85161811 - B3A SINE B2 -7 191 70 7 1206 23 0 0 0 chrX 81488670 81488693 -85161603 + AT_rich Low_complexity Low_complexity 1 23 0 7 1206 7782 65 5 4 chrX 81489915 81491599 -85158697 - L1Md_F2 LINE L1 -13 6569 4882 7 1206 27 0 0 65 chrX 81492876 81492922 -85157374 + AT_rich Low_complexity Low_complexity 1 43 0 7 1206 459 331 122 19 chrX 81493055 81493326 -85156970 + MLT2B4 LTR ERVL 1 299 -257 7 1206 295 333 46 25 chrX 81493358 81493555 -85156741 + MER2 DNA MER2_type 92 292 -53 7 1206 916 286 9 0 chrX 81493567 81493798 -85156498 - Lx6 LINE L1 -15 7445 7213 7 1206 544 62 37 0 chrX 81493800 81493881 -85156415 - L1_Mur3 LINE L1 -479 5401 5318 7 1206 867 244 56 9 chrX 81493872 81494087 -85156209 + Lx5 LINE L1 6826 7050 0 7 1206 321 137 82 0 chrX 81494093 81494166 -85156130 - L1_Mur3 LINE L1 -561 5316 5238 7 1206 1442 161 47 3 chrX 81494211 81494529 -85155767 - L1_Mur3 LINE L1 -2773 3107 2776 7 1206 1099 76 0 0 chrX 81494721 81494865 -85155431 - B1_Mus1 SINE Alu -2 146 3 7 1206 441 94 35 0 chrX 81495113 81495198 -85155098 + (TA)n Simple_repeat Simple_repeat 1 88 0 7 1206 280 320 0 13 chrX 81495470 81495546 -85154750 - ID2 SINE ID -1 82 8 7 1206 325 245 117 10 chrX 81495682 81495785 -85154511 - PB1D9 SINE Alu -6 114 1 7 1206 2949 46 0 16 chrX 81495908 81496287 -85154009 + L1Md_F2 LINE L1 6196 6568 -14 7 1206 326 42 21 0 chrX 81496303 81496351 -85153945 + (CAA)n Simple_repeat Simple_repeat 2 50 0 7 1206 525 307 14 21 chrX 81497119 81497259 -85153037 - RSINE1 SINE B4 -25 140 2 7 1206 497 295 98 89 chrX 81497829 81498258 -85152038 - L3 LINE CR1 -1558 2931 2505 7 1206 210 37 0 0 chrX 81498258 81498285 -85152011 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 1206 497 295 98 89 chrX 81498285 81498405 -85151891 - L3 LINE CR1 -1985 2504 2377 7 1206 219 36 0 0 chrX 81498443 81498471 -85151825 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 1206 560 276 124 23 chrX 81499021 81499449 -85150847 - L1ME3 LINE L1 -308 6136 5657 7 1206 415 326 13 66 chrX 81499510 81499661 -85150635 + RSINE1 SINE B4 3 145 -20 7 1206 1385 99 26 4 chrX 81499766 81500000 -85150296 - Lx LINE L1 0 6654 6416 7 1206 2313 140 3 38 chrX 81500000 81500371 -85149925 - Lx LINE L1 -239 6415 6058 1 1206 187 385 58 33 chrX 81500549 81500670 -85149626 - L2b LINE L2 0 3375 3252 2 1206 363 44 0 0 chrX 81502289 81502334 -85147962 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1206 545 76 0 12 chrX 81502334 81502414 -85147882 + (GA)n Simple_repeat Simple_repeat 1 79 0 4 1206 459 0 0 0 chrX 81502462 81502513 -85147783 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1206 405 0 0 0 chrX 81502513 81502557 -85147739 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1206 366 107 0 0 chrX 81502851 81502907 -85147389 + (TCCCC)n Simple_repeat Simple_repeat 1 56 0 7 1206 302 256 143 20 chrX 81503504 81503707 -85146589 - Lx9 LINE L1 -2 7642 7415 8 1206 253 255 0 0 chrX 81503954 81504001 -85146295 + L2a LINE L2 3362 3408 -18 9 1206 378 0 0 0 chrX 81504896 81504938 -85145358 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1206 270 0 0 0 chrX 81504938 81504967 -85145329 + (GA)n Simple_repeat Simple_repeat 1 30 0 1 1206 27 62 0 0 chrX 81505461 81505509 -85144787 + AT_rich Low_complexity Low_complexity 1 48 0 1 1206 1439 102 14 44 chrX 81506652 81506875 -85143421 + L1_Mus3 LINE L1 6345 6611 -27 1 1206 3648 68 4 4 chrX 81506875 81507344 -85142952 + L1_Mus1 LINE L1 6098 6566 -1 1 1206 1439 86 9 47 chrX 81507344 81507375 -85142921 + L1_Mus3 LINE L1 6612 6633 -5 1 1206 206 350 38 57 chrX 81507631 81507737 -85142559 - MER5B DNA MER1_type -68 110 7 1 1206 301 323 30 15 chrX 81508525 81508660 -85141636 + MER5A1 DNA MER1_type 1 137 -29 1 1206 31 0 0 0 chrX 81509249 81509280 -85141016 + AT_rich Low_complexity Low_complexity 1 31 0 1 1206 291 169 0 0 chrX 81509434 81509505 -85140791 + CT-rich Low_complexity Low_complexity 2 72 0 1 1206 282 253 25 12 chrX 81509514 81509594 -85140702 - ID_B1 SINE B4 0 224 144 1 1206 246 62 0 0 chrX 81509596 81509628 -85140668 + (TTA)n Simple_repeat Simple_repeat 2 33 0 2 1206 27917 97 22 8 chrX 81509642 81513111 -85137185 - Lx3_Mus LINE L1 -11 6998 3481 2 1206 189 0 0 0 chrX 81513111 81513132 -85137164 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2 1206 27917 95 21 6 chrX 81513132 81514893 -85135403 - Lx3_Mus LINE L1 -2406 3480 1695 2 1206 243 270 0 108 chrX 81514910 81514993 -85135303 - ID_B1 SINE B4 -63 161 88 1 1206 1153 75 0 0 chrX 81515106 81515253 -85135043 + B1_Mm SINE Alu 1 147 0 2 1206 186 43 0 0 chrX 81515784 81515807 -85134489 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 1206 282 286 14 0 chrX 81516143 81516213 -85134083 + B3A SINE B2 1 71 -127 2 1206 28 61 0 0 chrX 81516292 81516341 -85133955 + AT_rich Low_complexity Low_complexity 1 49 0 2 1206 22 0 0 0 chrX 81518178 81518200 -85132096 + AT_rich Low_complexity Low_complexity 1 22 0 2 1206 255 294 63 81 chrX 81519335 81519446 -85130850 - LTR65 LTR ERV1 -172 497 389 2 1206 369 240 84 134 chrX 81519412 81519614 -85130682 + Charlie4a DNA MER1_type 7 198 -310 2 1206 1198 43 56 0 chrX 81519626 81519787 -85130509 - L1_Mus1 LINE L1 -1 6566 6397 3 1206 420 274 118 23 chrX 81519983 81520203 -85130093 - L1MA5 LINE L1 -11 6289 6049 3 1206 405 58 0 0 chrX 81520408 81520460 -85129836 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1206 639 168 0 20 chrX 81520908 81521010 -85129286 + polypyrimidine Low_complexity Low_complexity 45 144 0 3 1206 1223 45 5 38 chrX 81521010 81521196 -85129100 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 3 1206 639 168 0 20 chrX 81521196 81521239 -85129057 + polypyrimidine Low_complexity Low_complexity 2 44 0 3 1206 531 215 0 0 chrX 81521498 81521591 -85128705 - B1_Mus2 SINE Alu -8 139 47 3 1206 369 321 79 47 chrX 81522853 81523131 -85127165 + MamRep434 DNA TcMar 71 357 -69 3 1206 7428 88 48 6 chrX 81523276 81524847 -85125449 + L1_Mus3 LINE L1 4983 6632 -6 3 1206 185 371 39 49 chrX 81525669 81525771 -85124525 - MIRc SINE MIR -167 101 1 3 1207 267 261 88 35 chrX 81527095 81527266 -85123030 + Tigger13a DNA MER2_type 212 391 -380 4 1207 373 333 58 20 chrX 81527552 81527758 -85122538 + L1M2 LINE L1 2919 3131 -3015 4 1207 18478 113 192 11 chrX 81527786 81533001 -85117295 + L1_Mus3 LINE L1 432 6638 0 4 1207 391 269 226 19 chrX 81533471 81533743 -85116553 + L1MA10 LINE L1 5825 6178 -156 4 1207 279 0 0 0 chrX 81533743 81533774 -85116522 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1207 391 267 239 22 chrX 81533774 81533856 -85116440 + L1MA10 LINE L1 6179 6260 -74 4 1207 690 317 107 24 chrX 81533998 81534360 -85115936 + L1MB3 LINE L1 5485 5884 -299 4 1207 618 14 0 0 chrX 81534360 81534431 -85115865 + (GGAA)n Simple_repeat Simple_repeat 1 71 0 4 1207 690 317 107 24 chrX 81534431 81534659 -85115637 + L1MB3 LINE L1 5885 6123 -60 4 1207 247 267 26 26 chrX 81534785 81534862 -85115434 + RSINE1 SINE B4 8 84 -81 4 1207 234 191 0 0 chrX 81534878 81534925 -85115371 + (CTG)n Simple_repeat Simple_repeat 1 47 0 4 1207 185 0 0 39 chrX 81534957 81534983 -85115313 + (CAAAAA)n Simple_repeat Simple_repeat 6 30 0 4 1207 991 321 116 6 chrX 81534997 81535470 -85114826 + Lx8 LINE L1 6423 6947 -526 5 1207 300 357 9 0 chrX 81535475 81535587 -85114709 - Lx8 LINE L1 -541 6932 6820 5 1207 637 254 6 0 chrX 81535599 81535768 -85114528 - Lx6 LINE L1 -8 7452 7283 5 1207 24 0 0 0 chrX 81535967 81535991 -85114305 + AT_rich Low_complexity Low_complexity 1 24 0 5 1207 40537 15 1 6 chrX 81536083 81542281 -85108015 - L1Md_A LINE L1 -1 6581 422 5 1207 26 50 0 0 chrX 81542425 81542465 -85107831 + AT_rich Low_complexity Low_complexity 1 40 0 5 1207 180 0 0 0 chrX 81543197 81543217 -85107079 + (TATG)n Simple_repeat Simple_repeat 1 20 0 5 1207 252 0 0 0 chrX 81543232 81543260 -85107036 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1207 578 259 32 45 chrX 81543262 81543416 -85106880 - B3A SINE B2 -46 152 1 5 1207 3129 48 8 5 chrX 81543855 81544252 -85106044 - L1Md_F3 LINE L1 -15 6569 6172 5 1207 4607 63 2 0 chrX 81545661 81546245 -85104051 - L1Md_F2 LINE L1 -244 6338 5754 6 1207 1680 236 12 9 chrX 81546255 81546601 -85103695 + Lx6 LINE L1 6795 7141 -319 6 1207 2847 58 0 6 chrX 81548222 81548588 -85101708 - L1Md_F2 LINE L1 -14 6568 6205 6 1207 22 0 0 0 chrX 81549662 81549684 -85100612 + AT_rich Low_complexity Low_complexity 1 22 0 6 1207 1916 52 0 12 chrX 81549684 81549935 -85100361 - L1Md_F3 LINE L1 -18 6566 6319 6 1207 26 74 0 0 chrX 81550396 81550450 -85099846 + AT_rich Low_complexity Low_complexity 1 54 0 6 1207 233 311 54 0 chrX 81550839 81550913 -85099383 - ID4 SINE ID -4 79 2 6 1207 209 176 0 0 chrX 81551347 81551381 -85098915 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1207 3624 70 23 0 chrX 81551438 81551910 -85098386 - L1_Mus2 LINE L1 -162 6404 5922 6 1207 193 358 56 6 chrX 81552132 81552292 -85098004 - L2a LINE L2 -8 3418 3251 6 1207 266 329 63 19 chrX 81552560 81552718 -85097578 + MER63D DNA AcHobo 404 568 -493 7 1207 27 62 0 0 chrX 81552758 81552806 -85097490 + AT_rich Low_complexity Low_complexity 1 48 0 7 1207 32 0 0 0 chrX 81552870 81552902 -85097394 + AT_rich Low_complexity Low_complexity 1 32 0 7 1207 3285 107 22 14 chrX 81553099 81553593 -85096703 - Lx LINE L1 -3 6651 6154 7 1207 798 102 115 15 chrX 81553646 81553776 -85096520 + B1_Mm SINE Alu 1 143 -4 7 1207 234 0 0 0 chrX 81553777 81553803 -85096493 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 7 1207 425 298 165 0 chrX 81554548 81554706 -85095590 + MER20 DNA MER1_type 35 218 -1 7 1207 818 154 12 6 chrX 81554924 81555087 -85095209 - Lx2A1 LINE L1 -13 6995 6832 7 1207 232 130 56 0 chrX 81555442 81555496 -85094800 + (CATA)n Simple_repeat Simple_repeat 4 60 0 7 1207 1126 61 0 26 chrX 81556363 81556515 -85093781 + B1_Mus1 SINE Alu 1 148 0 7 1207 211 28 56 0 chrX 81556519 81556555 -85093741 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 8 1207 318 206 0 0 chrX 81557298 81557366 -85092930 + (TA)n Simple_repeat Simple_repeat 2 69 0 8 1207 467 33 16 0 chrX 81557367 81557428 -85092868 + (GA)n Simple_repeat Simple_repeat 1 62 0 8 1207 270 278 107 3 chrX 81558886 81559008 -85091288 - L1MB2 LINE L1 -187 5993 5851 8 1207 651 314 66 30 chrX 81559163 81559498 -85090798 - Lx6 LINE L1 -580 6880 6534 8 1207 472 266 97 11 chrX 81559501 81559566 -85090730 + Lx6 LINE L1 7245 7311 -149 8 1207 783 0 0 0 chrX 81559566 81559653 -85090643 + (TTC)n Simple_repeat Simple_repeat 3 89 0 8 1207 472 266 97 11 chrX 81559653 81559762 -85090534 + Lx6 LINE L1 7312 7434 -26 8 1207 21 36 0 0 chrX 81560463 81560491 -85089805 + AT_rich Low_complexity Low_complexity 1 28 0 8 1207 1526 40 50 0 chrX 81561079 81561280 -85089016 + L1Md_F3 LINE L1 6372 6582 -2 8 1207 194 241 111 0 chrX 81562972 81563026 -85087270 - L2a LINE L2 0 3426 3367 8 1207 25 31 0 0 chrX 81563837 81563869 -85086427 + AT_rich Low_complexity Low_complexity 1 32 0 9 1207 863 45 9 0 chrX 81564054 81564165 -85086131 + B1_Mm SINE Alu 36 147 0 9 1207 243 0 0 0 chrX 81564172 81564199 -85086097 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1207 769 282 158 40 chrX 81566750 81567079 -85083217 - ORR1D2 LTR MaLR 0 370 3 9 1207 251 241 23 0 chrX 81567118 81567205 -85083091 + (TA)n Simple_repeat Simple_repeat 2 90 0 9 1207 473 0 18 0 chrX 81567205 81567262 -85083034 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 9 1207 311 161 21 0 chrX 81567293 81567386 -85082910 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 9 1207 580 312 17 0 chrX 81567404 81567635 -85082661 - L1M2 LINE L1 -518 5779 5545 9 1207 201 74 0 0 chrX 81567662 81567689 -85082607 + (T)n Simple_repeat Simple_repeat 1 27 0 9 1207 208 347 98 16 chrX 81567813 81567936 -85082360 + MIRc SINE MIR 15 147 -121 9 1207 620 229 13 40 chrX 81568263 81568413 -85081883 - B1_Mur1 SINE Alu -3 146 1 1 1207 312 390 15 0 chrX 81569309 81569445 -85080851 - MLT1H LTR MaLR -324 225 88 1 1207 441 167 0 0 chrX 81569945 81570047 -85080249 + (TA)n Simple_repeat Simple_repeat 1 102 0 1 1207 7933 50 2 8 chrX 81570049 81571253 -85079043 - L1Md_F2 LINE L1 -14 6568 5372 1 1207 344 373 8 0 chrX 81571370 81571504 -85078792 - B4A SINE B4 -75 217 83 1 1207 805 340 35 10 chrX 81571843 81572155 -85078141 - Lx8 LINE L1 -356 7117 6798 1 1207 1585 313 49 59 chrX 81572245 81573948 -85076348 - Lx8 LINE L1 -941 6532 4815 1 1207 4323 112 2 6 chrX 81574165 81574793 -85075503 + Lx3A LINE L1 6351 6975 -6 1 1207 23 33 0 0 chrX 81574803 81574833 -85075463 + AT_rich Low_complexity Low_complexity 1 30 0 1 1207 1386 304 27 19 chrX 81574872 81575327 -85074969 - Lx9 LINE L1 -770 6874 6273 1 1207 458 174 9 27 chrX 81575536 81575648 -85074648 - Lx3C LINE L1 -2 6974 6865 1 1207 493 305 55 52 chrX 81576015 81576386 -85073910 - MLT1G1 LTR MaLR -154 425 2 1 1207 30 45 0 0 chrX 81576514 81576558 -85073738 + AT_rich Low_complexity Low_complexity 1 44 0 1 1207 29 28 0 0 chrX 81578050 81578086 -85072210 + AT_rich Low_complexity Low_complexity 1 36 0 1 1207 308 316 25 42 chrX 81578600 81578719 -85071577 + LTR16C LTR ERVL 1 117 -372 1 1207 791 301 20 10 chrX 81578905 81579106 -85071190 - B3 SINE B2 -8 208 6 1 1207 275 331 51 14 chrX 81580533 81580671 -85069625 + RSINE1 SINE B4 4 146 -19 1 1207 225 0 0 0 chrX 81581153 81581178 -85069118 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1207 402 21 0 0 chrX 81581188 81581235 -85069061 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1207 534 284 8 0 chrX 81581262 81581389 -85068907 + B3 SINE B2 7 134 -82 1 1207 378 0 0 0 chrX 81581398 81581440 -85068856 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1207 251 362 154 67 chrX 81581473 81581772 -85068524 - MLT1F2 LTR MaLR -129 431 107 1 1207 4633 63 0 3 chrX 81582204 81582805 -85067491 + L1Md_F2 LINE L1 4988 5586 -297 1 1207 7760 52 12 1 chrX 81582805 81583778 -85066518 + L1Md_F2 LINE L1 5587 6570 -12 1 1207 247 265 126 48 chrX 81584422 81584525 -85065771 + MER33 DNA MER1_type 3 113 -211 1 1207 568 206 121 0 chrX 81584733 81584898 -85065398 - Lx9 LINE L1 -46 7598 7414 1 1207 218 297 72 144 chrX 81585463 81585644 -85064652 - MIRb SINE MIR -30 238 71 1 1207 23 0 0 0 chrX 81585847 81585870 -85064426 + AT_rich Low_complexity Low_complexity 1 23 0 1 1207 695 102 23 8 chrX 81586352 81586481 -85063815 - L1_Mus3 LINE L1 -7 6631 6501 1 1207 12337 23 6 0 chrX 81586623 81588089 -85062207 + L1Md_T LINE L1 4113 5586 -297 1 1207 8379 32 0 0 chrX 81588089 81589085 -85061211 + L1Md_T LINE L1 5587 6582 0 1 1207 2819 126 18 0 chrX 81589219 81589654 -85060642 - Lx2 LINE L1 -4 6993 6551 1 1207 317 282 0 25 chrX 81589801 81589881 -85060415 - ID4 SINE ID -4 79 2 1 1207 252 0 0 0 chrX 81590564 81590592 -85059704 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1207 276 102 0 0 chrX 81590618 81590667 -85059629 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 1 1207 213 213 0 0 chrX 81590807 81590854 -85059442 + (CATA)n Simple_repeat Simple_repeat 2 48 0 1 1207 2043 58 0 0 chrX 81590896 81591156 -85059140 + L1Md_T LINE L1 6323 6582 0 1 1207 24 0 0 0 chrX 81591156 81591180 -85059116 + AT_rich Low_complexity Low_complexity 1 24 0 1 1207 219 325 12 36 chrX 81592311 81592394 -85057902 + RSINE1 SINE B4 1 81 -84 1 1207 495 0 0 0 chrX 81592434 81592489 -85057807 + (TAAA)n Simple_repeat Simple_repeat 4 58 0 1 1207 397 318 122 41 chrX 81592635 81593052 -85057244 - Arthur1 DNA Tip100 -86 3861 3411 1 1207 365 326 66 86 chrX 81593461 81593612 -85056684 - B1_Mur2 SINE Alu -1 148 1 1 1207 1601 268 101 13 chrX 81594081 81594607 -85055689 - Lx6 LINE L1 -21 7439 6868 1 1207 2382 189 24 48 chrX 81594602 81595180 -85055116 - L1MEc LINE L1 -1161 4892 4329 1 1207 4896 186 145 43 chrX 81595174 81595236 -85055060 - L1MEc LINE L1 -2112 3941 3897 1 1207 1092 81 0 0 chrX 81595236 81595384 -85054912 - B1_Mus1 SINE Alu 0 148 1 1 1207 4896 189 139 45 chrX 81595384 81596924 -85053372 - L1MEc LINE L1 -2157 3896 2219 1 1207 356 289 13 151 chrX 81597216 81597375 -85052921 + MTD LTR MaLR 97 233 -186 1 1207 227 284 80 22 chrX 81597553 81597690 -85052606 - Charlie5 DNA MER1_type -53 2571 2427 1 1207 20014 116 119 6 chrX 81597854 81602014 -85048282 - L1_Mus2 LINE L1 0 6566 1896 1 1207 409 336 8 0 chrX 81602478 81602603 -85047693 + Lx8 LINE L1 7201 7326 -147 1 1207 1398 250 26 63 chrX 81602604 81602984 -85047312 + MTD LTR MaLR 1 366 -53 1 1207 650 305 100 38 chrX 81603717 81604037 -85046259 - MER58B DNA MER1_type 0 341 2 1 1207 492 171 37 25 chrX 81604745 81605086 -85045210 + (TG)n Simple_repeat Simple_repeat 1 345 0 1 1207 466 158 42 24 chrX 81605099 81605435 -85044861 + (TG)n Simple_repeat Simple_repeat 1 342 0 1 1207 292 291 110 116 chrX 81605468 81605760 -85044536 - B4 SINE B4 0 292 3 1 1207 204 152 43 21 chrX 81607249 81607296 -85043000 + T-rich Low_complexity Low_complexity 1 48 0 1 1207 1822 209 66 0 chrX 81607458 81607822 -85042474 + MTC LTR MaLR 32 419 -2 1 1207 299 311 80 36 chrX 81608129 81608403 -85041893 - L1MA9 LINE L1 -24 6276 5991 1 1207 1261 286 96 16 chrX 81608547 81609109 -85041187 - L1MA9 LINE L1 -384 5928 5322 1 1207 312 335 54 46 chrX 81609609 81609850 -85040446 - L1ME3A LINE L1 -160 6013 5771 1 1207 432 0 0 0 chrX 81609917 81609965 -85040331 + (TC)n Simple_repeat Simple_repeat 2 49 0 1 1207 333 0 0 0 chrX 81609965 81610001 -85040295 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1207 325 321 154 9 chrX 81610079 81610189 -85040107 + B4 SINE B4 1 126 -166 1 1207 1517 216 101 120 chrX 81610199 81610715 -85039581 - RMER15 LTR ERVL -48 527 22 1 1207 239 322 103 0 chrX 81610873 81610960 -85039336 + B4 SINE B4 128 223 -69 1 1207 6103 87 30 8 chrX 81610965 81612113 -85038183 - Lx3_Mus LINE L1 -536 6473 5313 1 1207 2785 63 28 0 chrX 81612143 81612506 -85037790 - L1_Mus1 LINE L1 0 6567 6195 1 1207 198 0 0 0 chrX 81612544 81612566 -85037730 + (GA)n Simple_repeat Simple_repeat 1 22 0 1 1207 180 0 0 0 chrX 81612914 81612934 -85037362 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1207 400 303 57 29 chrX 81613120 81613365 -85036931 - Lx3_Mus LINE L1 -1453 4693 4442 1 1207 353 240 20 20 chrX 81614141 81614243 -85036053 - Lx4B LINE L1 -290 6768 6667 1 1207 2955 41 44 0 chrX 81614361 81614726 -85035570 - L1Md_F2 LINE L1 -16 6566 6186 1 1207 22 0 0 0 chrX 81614838 81614860 -85035436 + AT_rich Low_complexity Low_complexity 1 22 0 1 1207 374 156 33 11 chrX 81615310 81615401 -85034895 + Lx5 LINE L1 6946 7038 -12 1 1207 1073 66 0 0 chrX 81615418 81615554 -85034742 + B1_Mus2 SINE Alu 2 137 -10 1 1207 487 41 0 26 chrX 81615554 81615630 -85034666 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 1 1207 198 0 0 0 chrX 81615725 81615747 -85034549 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1207 1205 48 0 0 chrX 81616347 81616494 -85033802 + B1_Mus2 SINE Alu 1 147 0 1 1207 225 0 0 0 chrX 81616494 81616519 -85033777 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1207 478 308 0 0 chrX 81618344 81618487 -85031809 - B1F2 SINE Alu -6 143 1 1 1207 368 259 84 10 chrX 81619123 81619274 -85031022 - MER31A LTR ERV1 -204 281 112 1 1207 324 0 0 0 chrX 81620814 81620850 -85029446 + (TTTTG)n Simple_repeat Simple_repeat 3 38 0 1 1207 237 178 0 0 chrX 81621618 81621663 -85028633 + A-rich Low_complexity Low_complexity 1 45 0 1 1207 494 275 76 14 chrX 81622555 81622699 -85027597 + ID_B1 SINE B4 70 222 -2 1 1207 225 305 60 12 chrX 81622826 81622909 -85027387 - MER67A LTR ERV1 -235 308 222 1 1207 318 26 0 0 chrX 81622989 81623028 -85027268 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1207 309 234 13 25 chrX 81623234 81623313 -85026983 - ID4_ SINE ID -3 80 3 1 1207 803 28 0 18 chrX 81623597 81623706 -85026590 + B1_Mm SINE Alu 1 107 -40 1 1207 843 39 15 44 chrX 81623706 81623842 -85026454 + L1Md_F2 LINE L1 6447 6578 -4 1 1207 628 119 16 56 chrX 81623842 81623857 -85026439 + PB1D9 SINE Alu 106 120 0 1 1207 299 336 47 14 chrX 81624636 81624784 -85025512 - MER31-int LTR ERV1 -4020 916 764 1 1207 8989 3 0 0 chrX 81625656 81626652 -85023644 - L1Md_A LINE L1 0 6582 5587 1 1207 1649 262 23 44 chrX 81626669 81627144 -85023152 - RMER19C LTR ERVK -13 598 134 1 1207 365 172 114 11 chrX 81627258 81627346 -85022950 + MTD LTR MaLR 1 97 -322 1 1207 700 76 0 0 chrX 81627333 81627425 -85022871 + B1_Mus2 SINE Alu 46 137 -10 1 1207 1152 259 72 9 chrX 81627449 81627768 -85022528 + MTD LTR MaLR 68 406 -13 1 1207 441 0 0 0 chrX 81627793 81627842 -85022454 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 1207 1161 269 50 40 chrX 81627989 81628469 -85021827 - Charlie2b DNA MER1_type -141 2641 2157 1 1207 305 274 58 10 chrX 81628700 81628803 -85021493 - Charlie2b DNA MER1_type -2668 114 7 1 1207 574 203 88 16 chrX 81629114 81629239 -85021057 - B1_Mur1 SINE Alu -4 145 12 1 1207 360 0 0 0 chrX 81630373 81630413 -85019883 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1 1207 303 368 53 71 chrX 81630879 81631218 -85019078 - L3 LINE CR1 -1467 3022 2690 1 1207 387 0 0 0 chrX 81631957 81632000 -85018296 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1207 1433 246 89 8 chrX 81632002 81632371 -85017925 + MTD LTR MaLR 21 419 0 1 1207 1162 113 11 5 chrX 81632391 81632578 -85017718 - B2_Mm2 SINE B2 -5 190 3 1 1207 277 293 20 10 chrX 81632758 81632858 -85017438 - LTR81C LTR ERV1? -170 983 883 1 1207 1050 108 0 0 chrX 81633401 81633549 -85016747 + B1_Mus1 SINE Alu 1 148 0 1 1207 27 29 0 0 chrX 81633665 81633699 -85016597 + AT_rich Low_complexity Low_complexity 1 34 0 1 1207 292 364 0 26 chrX 81633849 81633867 -85016429 + ID SINE ID 70 84 -140 1 1207 358 360 0 17 chrX 81633867 81633983 -85016313 + PB1D10 SINE Alu 4 117 0 1 1207 29 28 0 0 chrX 81634108 81634144 -85016152 + AT_rich Low_complexity Low_complexity 1 36 0 2 1207 38531 5 0 0 chrX 81634693 81640076 -85010220 + L1Md_A LINE L1 203 5586 -297 2 1207 8993 3 0 0 chrX 81640076 81641072 -85009224 + L1Md_A LINE L1 5587 6582 0 2 1207 665 301 16 59 chrX 81642066 81642253 -85008043 - B3A SINE B2 0 198 20 2 1207 565 154 19 0 chrX 81642261 81642365 -85007931 - B1_Mus2 SINE Alu -1 146 41 2 1207 453 221 27 17 chrX 81642410 81642550 -85007746 - Lx4B LINE L1 -5 7053 6880 2 1207 5491 192 31 106 chrX 81642533 81644433 -85005863 - L1VL4 LINE L1 -3230 2656 899 2 1207 1804 92 7 69 chrX 81644487 81644778 -85005518 + L1_Mus2 LINE L1 6293 6565 -1 2 1207 6958 90 36 1 chrX 81645204 81646229 -85004067 + L1_Mus3 LINE L1 5618 6638 0 2 1207 597 64 0 0 chrX 81646229 81646307 -85003989 + (GGGA)n Simple_repeat Simple_repeat 3 80 0 2 1207 1088 103 0 6 chrX 81646307 81646472 -85003824 + (GAAA)n Simple_repeat Simple_repeat 4 168 0 2 1207 307 218 0 13 chrX 81647552 81647631 -85002665 - Lx6 LINE L1 -2 7458 7381 2 1207 1097 226 58 24 chrX 81647637 81647931 -85002365 - RLTR9D LTR ERVK -1 402 99 2 1207 3813 62 20 0 chrX 81647931 81648431 -85001865 + L1_Mm LINE L1 5027 5536 -347 2 1207 387 331 7 66 chrX 81648431 81648481 -85001815 - RLTR9D LTR ERVK -250 143 98 2 1207 7338 63 10 50 chrX 81648481 81649499 -85000797 + L1Md_F2 LINE L1 5587 6563 -19 2 1207 713 92 0 3 chrX 81649499 81649600 -85000696 - RLTR9D LTR ERVK -296 97 1 2 1207 2140 281 65 10 chrX 81649600 81649712 -85000584 - Lx6 LINE L1 -76 7384 7268 2 1207 546 116 48 24 chrX 81649712 81649836 -85000460 + L1_Mus4 LINE L1 6509 6635 -1 2 1207 2140 281 65 10 chrX 81649836 81650191 -85000105 - Lx6 LINE L1 -193 7267 6906 2 1207 813 99 0 0 chrX 81650191 81650312 -84999984 + (TC)n Simple_repeat Simple_repeat 2 122 0 2 1207 2140 285 28 31 chrX 81650312 81651071 -84999225 - Lx6 LINE L1 -555 6905 6072 2 1207 3760 202 40 6 chrX 81651075 81651931 -84998365 - Lx6 LINE L1 -247 5633 4749 2 1207 8046 55 2 3 chrX 81651931 81652949 -84997347 - L1Md_F2 LINE L1 -12 6570 5582 2 1207 3783 200 43 5 chrX 81652963 81653085 -84997211 - Lx6 LINE L1 -1121 4759 4637 2 1207 183 42 0 0 chrX 81653085 81653109 -84997187 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 1207 3783 200 43 5 chrX 81653109 81653819 -84996477 - Lx6 LINE L1 -1244 4636 3897 2 1207 364 291 59 33 chrX 81654282 81654406 -84995890 - MER104 DNA Tc2 -15 166 36 2 1207 1492 63 11 0 chrX 81654406 81654596 -84995700 + B2_Mm1t SINE B2 1 192 -1 2 1207 364 291 59 33 chrX 81654596 81654624 -84995672 - MER104 DNA Tc2 -146 35 10 2 1207 318 305 112 14 chrX 81655237 81655380 -84994916 + B3 SINE B2 60 216 0 2 1207 320 43 0 21 chrX 81655545 81655592 -84994704 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1207 537 286 94 30 chrX 81655655 81655857 -84994439 + B3 SINE B2 2 216 0 2 1207 336 103 0 0 chrX 81656049 81656107 -84994189 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1207 3653 130 47 16 chrX 81656967 81657088 -84993208 - Lx LINE L1 -3 6651 6535 2 1207 180 0 0 0 chrX 81657088 81657108 -84993188 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 2 1207 3653 130 47 16 chrX 81657108 81657605 -84992691 - Lx LINE L1 -120 6534 6015 2 1208 371 223 11 0 chrX 81657905 81657999 -84992297 + Lx7 LINE L1 7269 7363 -333 2 1208 339 107 296 45 chrX 81658029 81658117 -84992179 + Lx2B LINE L1 6887 6996 -4 2 1208 221 299 60 19 chrX 81658334 81658426 -84991870 - B1F SINE Alu -15 102 12 2 1208 186 133 0 0 chrX 81658674 81658704 -84991592 + (T)n Simple_repeat Simple_repeat 1 30 0 2 1208 234 0 0 0 chrX 81659772 81659798 -84990498 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2 1208 7774 142 54 8 chrX 81659893 81661466 -84988830 - Lx2B LINE L1 -23 6977 5336 2 1208 297 268 0 40 chrX 81661502 81661576 -84988720 + B3 SINE B2 6 76 -140 2 1208 765 231 34 69 chrX 81661576 81661916 -84988380 - RMER17B LTR ERVK -24 934 590 2 1208 198 150 0 0 chrX 81661955 81661995 -84988301 + (CAGA)n Simple_repeat Simple_repeat 1 40 0 2 1208 835 39 55 0 chrX 81662012 81662139 -84988157 + L1Md_F3 LINE L1 6450 6583 -1 2 1208 286 328 60 38 chrX 81662649 81662782 -84987514 - B1_Mus2 SINE Alu -3 144 9 2 1208 257 282 113 28 chrX 81662913 81663019 -84987277 - B3 SINE B2 -14 202 88 2 1208 1635 154 82 0 chrX 81663040 81663333 -84986963 + RMER17B LTR ERVK 1 317 -641 2 1208 369 0 0 0 chrX 81663342 81663383 -84986913 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1208 25 0 0 0 chrX 81663436 81663461 -84986835 + AT_rich Low_complexity Low_complexity 1 25 0 2 1208 5617 62 6 7 chrX 81663463 81664193 -84986103 - L1_Mus2 LINE L1 0 6566 5838 2 1208 1460 303 136 12 chrX 81664226 81664901 -84985395 - Lx8 LINE L1 -251 7222 6464 2 1208 281 302 58 11 chrX 81664902 81664989 -84985307 - B1_Mm SINE Alu -56 91 1 2 1208 526 282 6 35 chrX 81664996 81665165 -84985131 - Lx8 LINE L1 -1081 6392 6229 2 1208 204 40 0 0 chrX 81666002 81666027 -84984269 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1208 322 377 14 46 chrX 81667713 81667930 -84982366 - RMER4A LTR ERVK -246 220 11 2 1208 455 60 15 0 chrX 81668075 81668142 -84982154 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 1208 514 326 55 11 chrX 81668150 81668333 -84981963 - Lx8 LINE L1 -146 7327 7137 2 1208 27 62 0 0 chrX 81668366 81668414 -84981882 + AT_rich Low_complexity Low_complexity 1 48 0 2 1208 2768 175 15 20 chrX 81668838 81669375 -84980921 - RMER5 LTR ERV1 0 534 1 2 1208 256 354 60 35 chrX 81670166 81670365 -84979931 - L3b LINE CR1 -161 321 118 2 1208 342 0 0 0 chrX 81670564 81670602 -84979694 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1208 759 68 62 8 chrX 81671934 81672076 -84978220 + L1_Mus2 LINE L1 6401 6595 -43 2 1208 436 94 0 0 chrX 81672075 81672139 -84978157 + L1_Mm LINE L1 1228 1291 -4592 2 1208 1934 31 235 3 chrX 81672156 81672445 -84977851 + L1Md_F3 LINE L1 6215 6570 -14 2 1208 24 59 0 42 chrX 81672462 81672533 -84977763 + AT_rich Low_complexity Low_complexity 1 68 0 2 1208 180 0 0 0 chrX 81673592 81673612 -84976684 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 1208 253 342 0 26 chrX 81673755 81673833 -84976463 - ID4 SINE ID 0 83 8 2 1208 5339 64 3 1 chrX 81673907 81674598 -84975698 + L1_Mus2 LINE L1 5873 6564 -2 2 1208 23 0 0 0 chrX 81675172 81675195 -84975101 + AT_rich Low_complexity Low_complexity 1 23 0 2 1208 396 321 162 35 chrX 81675206 81675403 -84974893 + ID_B1 SINE B4 3 224 0 2 1208 233 318 122 13 chrX 81675733 81675889 -84974407 - MER90a LTR ERV1 -166 448 276 2 1208 283 256 13 13 chrX 81676081 81676160 -84974136 - Kanga2_a DNA Tc2 -413 475 397 2 1208 243 301 124 60 chrX 81676215 81676448 -84973848 - Kanga2_a DNA Tc2 -599 289 42 2 1208 676 337 71 34 chrX 81676773 81677040 -84973256 - B4A SINE B4 -8 284 8 2 1208 31 0 0 0 chrX 81677050 81677081 -84973215 + AT_rich Low_complexity Low_complexity 1 31 0 2 1208 309 323 110 0 chrX 81678262 81678417 -84971879 - L2a LINE L2 -22 3404 3233 2 1208 268 327 60 82 chrX 81679362 81679595 -84970701 - MIRc SINE MIR -38 230 3 2 1208 473 346 132 47 chrX 81680031 81680537 -84969759 - MLT1H LTR MaLR 0 549 1 2 1208 256 406 62 22 chrX 81680589 81680768 -84969528 - MER5A DNA MER1_type -3 186 1 2 1208 183 80 0 0 chrX 81681327 81681352 -84968944 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1208 305 286 51 13 chrX 81681564 81681642 -84968654 + ID4 SINE ID 3 83 0 2 1208 592 106 152 42 chrX 81682526 81682644 -84967652 + Lx7 LINE L1 7564 7694 -2 2 1208 318 26 0 0 chrX 81683030 81683069 -84967227 + (TC)n Simple_repeat Simple_repeat 1 39 0 2 1208 627 103 0 0 chrX 81683108 81683205 -84967091 + (TCTA)n Simple_repeat Simple_repeat 4 100 0 2 1208 600 271 4 21 chrX 81683867 81684047 -84966249 + B3A SINE B2 42 216 0 2 1208 24 53 0 0 chrX 81684212 81684250 -84966046 + AT_rich Low_complexity Low_complexity 1 38 0 2 1208 308 94 19 0 chrX 81684887 81684940 -84965356 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 2 1208 351 44 0 0 chrX 81684941 81684986 -84965310 + (CATA)n Simple_repeat Simple_repeat 2 46 0 2 1208 251 337 72 72 chrX 81685554 81685762 -84964534 - MIRb SINE MIR -5 263 56 2 1208 384 22 0 0 chrX 81686242 81686287 -84964009 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1208 529 385 0 9 chrX 81687293 81687503 -84962793 - MER58A DNA MER1_type -15 209 2 2 1208 1370 215 124 28 chrX 81688247 81688610 -84961686 - RLTR11A LTR ERVK -129 399 2 2 1208 2493 103 53 23 chrX 81688615 81689012 -84961284 - RLTR9E LTR ERVK 0 409 1 2 1208 539 92 0 0 chrX 81689012 81689088 -84961208 - ETnERV2-int LTR ERVK 0 7406 7331 2 1208 1333 165 29 48 chrX 81689299 81689869 -84960427 - ETnERV2-int LTR ERVK -977 6429 6102 2 1208 1051 299 32 105 chrX 81690014 81690414 -84959882 + MTE2b LTR MaLR 1 371 -8 2 1208 315 146 0 0 chrX 81691218 81691273 -84959023 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 2 1208 5719 44 20 0 chrX 81691304 81692013 -84958283 - L1_Mus1 LINE L1 0 6567 5845 2 1208 246 325 125 0 chrX 81692042 81692122 -84958174 - PB1D10 SINE Alu -15 102 13 2 1208 3085 27 0 29 chrX 81692651 81693027 -84957269 - RLTR10B2 LTR ERVK 0 365 1 2 1208 690 273 86 20 chrX 81693123 81693415 -84956881 - L1MA9 LINE L1 -2 6310 6000 2 1208 22 70 0 0 chrX 81693618 81693661 -84956635 + AT_rich Low_complexity Low_complexity 1 43 0 2 1208 22 0 0 0 chrX 81694023 81694045 -84956251 + AT_rich Low_complexity Low_complexity 1 22 0 2 1208 2072 123 6 12 chrX 81695610 81695946 -84954350 + Lx LINE L1 6321 6654 0 2 1208 22 0 0 0 chrX 81695972 81695994 -84954302 + AT_rich Low_complexity Low_complexity 1 22 0 2 1208 296 125 16 0 chrX 81696772 81696836 -84953460 + (TATG)n Simple_repeat Simple_repeat 2 66 0 2 1208 487 257 82 14 chrX 81697071 81697217 -84953079 - ID_B1 SINE B4 -4 220 65 2 1208 1864 134 3 52 chrX 81697435 81697765 -84952531 - Lx LINE L1 -1 6653 6340 2 1208 23 0 0 0 chrX 81698104 81698127 -84952169 + AT_rich Low_complexity Low_complexity 1 23 0 2 1208 27 49 0 0 chrX 81699203 81699244 -84951052 + AT_rich Low_complexity Low_complexity 1 41 0 2 1208 1875 69 0 4 chrX 81699247 81699494 -84950802 - L1_Mus1 LINE L1 -1 6566 6321 2 1208 39 50 0 0 chrX 81699651 81699711 -84950585 + AT_rich Low_complexity Low_complexity 1 60 0 2 1208 935 233 35 0 chrX 81699944 81700146 -84950150 - B3 SINE B2 -3 213 5 3 1208 1131 44 0 0 chrX 81700294 81700431 -84949865 + B1_Mus1 SINE Alu 1 137 -11 3 1208 210 37 0 0 chrX 81700431 81700458 -84949838 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1208 3192 52 7 0 chrX 81700644 81701048 -84949248 - L1Md_F2 LINE L1 0 6582 6176 3 1208 533 257 0 9 chrX 81701117 81701231 -84949065 + RSINE1 SINE B4 9 121 -44 3 1208 26 0 0 0 chrX 81701678 81701704 -84948592 + AT_rich Low_complexity Low_complexity 1 26 0 3 1208 420 325 31 52 chrX 81702275 81702561 -84947735 + L1M2 LINE L1 2493 2772 -3371 3 1208 207 69 0 0 chrX 81702561 81702590 -84947706 + (TA)n Simple_repeat Simple_repeat 1 29 0 3 1208 339 341 132 24 chrX 81703854 81704067 -84946229 - L1M4 LINE L1 -359 5815 5580 3 1208 3010 96 67 2 chrX 81704266 81704713 -84945583 + L1Md_F LINE L1 575 1050 -5566 3 1208 13779 27 1 0 chrX 81704712 81706364 -84943932 + L1Md_F LINE L1 2127 3779 -2104 3 1208 5393 79 33 0 chrX 81706360 81707296 -84943000 + L1Md_A LINE L1 1059 2025 -3858 3 1208 390 294 126 18 chrX 81707971 81708082 -84942214 - RSINE1 SINE B4 -32 133 11 3 1208 594 103 0 0 chrX 81708330 81708417 -84941879 + (TG)n Simple_repeat Simple_repeat 2 88 0 3 1208 2325 45 0 7 chrX 81708533 81708827 -84941469 - L1Md_F2 LINE L1 -1 6581 6290 3 1208 1236 174 5 18 chrX 81709200 81709422 -84940874 - URR1B DNA MER1_type 0 225 7 3 1208 900 130 91 18 chrX 81709520 81709685 -84940611 + B2_Mm2 SINE B2 1 177 -18 3 1208 22 0 0 0 chrX 81710085 81710107 -84940189 + AT_rich Low_complexity Low_complexity 1 22 0 3 1208 269 296 32 58 chrX 81710403 81710593 -84939703 + L1M2 LINE L1 5429 5613 -687 3 1208 280 344 0 0 chrX 81710594 81710684 -84939612 + B4A SINE B4 4 93 -199 3 1208 4430 125 17 21 chrX 81711446 81712171 -84938125 - Lx3A LINE L1 0 6981 6260 3 1208 5541 79 22 11 chrX 81712171 81713147 -84937149 - Lx3A LINE L1 -883 6098 5106 3 1208 1041 153 15 10 chrX 81713186 81713391 -84936905 - L1_Mus3 LINE L1 -5 6633 6428 3 1208 27243 96 6 2 chrX 81713391 81714879 -84935417 - L1_Mus2 LINE L1 -429 6137 4629 3 1208 240 86 0 0 chrX 81714879 81714914 -84935382 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3 1208 27243 118 9 3 chrX 81714914 81717894 -84932402 - L1_Mus2 LINE L1 -1255 4628 1641 3 1208 1973 106 0 0 chrX 81717892 81718174 -84932122 - Lx3A LINE L1 -768 5118 4837 3 1208 201 226 0 0 chrX 81718599 81718652 -84931644 + (ATG)n Simple_repeat Simple_repeat 1 53 0 3 1208 329 361 29 19 chrX 81718663 81718872 -84931424 - MIR SINE MIR -46 216 6 3 1208 1776 166 116 0 chrX 81720535 81720879 -84929417 - ORR1B1 LTR MaLR -8 386 3 3 1208 1044 46 0 0 chrX 81720908 81721038 -84929258 + (TTTC)n Simple_repeat Simple_repeat 3 132 0 3 1208 214 410 0 40 chrX 81721856 81721955 -84928341 + MIRm SINE MIR 95 189 -87 3 1208 189 107 0 0 chrX 81722322 81722350 -84927946 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 1208 675 25 0 0 chrX 81722351 81722432 -84927864 + (GA)n Simple_repeat Simple_repeat 1 81 0 3 1208 670 318 31 40 chrX 81722441 81722667 -84927629 + B4A SINE B4 41 264 -28 3 1208 296 48 24 0 chrX 81722831 81722873 -84927423 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 1208 3560 63 0 7 chrX 81723113 81723577 -84926719 + L1_Mus2 LINE L1 6103 6563 -3 3 1208 1248 225 125 17 chrX 81723629 81723973 -84926323 - ORR1C2 LTR MaLR -1 383 3 3 1208 1803 70 4 4 chrX 81724420 81724663 -84925633 + L1_Mus2 LINE L1 6324 6566 0 3 1208 35891 33 6 8 chrX 81725879 81730862 -84919434 + L1Md_T LINE L1 623 5585 -298 3 1208 7928 49 1 12 chrX 81730863 81731857 -84918439 + L1Md_T LINE L1 5587 6569 -13 3 1208 27 0 0 0 chrX 81731857 81731884 -84918412 + AT_rich Low_complexity Low_complexity 1 27 0 3 1208 281 295 0 35 chrX 81732273 81732389 -84917907 + A-rich Low_complexity Low_complexity 4 115 0 3 1208 22 0 0 0 chrX 81733805 81733827 -84916469 + AT_rich Low_complexity Low_complexity 1 22 0 3 1208 802 346 58 24 chrX 81735714 81736093 -84914203 + Tigger7 DNA MER2_type 213 604 -1887 3 1208 276 299 0 0 chrX 81736109 81736176 -84914120 + Tigger7 DNA MER2_type 2424 2490 -1 3 1208 1882 65 12 0 chrX 81737237 81737482 -84912814 - L1_Mus1 LINE L1 0 6567 6320 3 1208 227 360 63 97 chrX 81737500 81737851 -84912445 - MLT1J LTR MaLR -23 489 151 3 1208 342 0 0 0 chrX 81738328 81738366 -84911930 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3 1208 665 224 135 0 chrX 81738376 81738532 -84911764 - MER3 DNA MER1_type 0 209 33 3 1208 438 137 0 0 chrX 81738859 81738954 -84911342 + (T)n Simple_repeat Simple_repeat 1 95 0 3 1208 714 34 0 0 chrX 81738954 81739042 -84911254 - B1_Mm SINE Alu 0 147 60 3 1208 269 274 80 8 chrX 81739291 81739416 -84910880 + L1MB1 LINE L1 6031 6164 -25 3 1208 403 287 0 0 chrX 81739448 81739535 -84910761 + ID_B1 SINE B4 9 95 -129 3 1208 12906 125 10 3 chrX 81739535 81742010 -84908286 - L1_Mus4 LINE L1 -335 6301 3806 3 1208 2888 106 17 23 chrX 81741983 81742742 -84907554 - L1VL4 LINE L1 -2230 1329 573 3 1208 1078 288 28 25 chrX 81742826 81743182 -84907114 + ORR1E LTR MaLR 1 357 -2 3 1208 4288 295 112 16 chrX 81743187 81744575 -84905721 + ORR1E-int LTR MaLR 3 1527 -53 3 1208 1273 306 28 25 chrX 81744575 81744931 -84905365 + ORR1E LTR MaLR 1 357 -2 3 1208 328 376 22 34 chrX 81745475 81745654 -84904642 + B3 SINE B2 3 179 -37 3 1208 876 118 26 101 chrX 81746588 81746777 -84903519 + B2_Mm2 SINE B2 13 187 -8 3 1208 427 325 80 30 chrX 81746891 81747091 -84903205 + MLT1A0 LTR MaLR 48 257 -108 3 1208 23 0 0 0 chrX 81747123 81747146 -84903150 + AT_rich Low_complexity Low_complexity 1 23 0 3 1208 3214 65 7 7 chrX 81747227 81747649 -84902647 - L1Md_F2 LINE L1 0 6582 6161 3 1208 336 48 0 0 chrX 81747866 81747908 -84902388 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1208 363 0 19 0 chrX 81748251 81748303 -84901993 + L1Md_T LINE L1 6530 6582 0 3 1208 257 338 0 0 chrX 81748851 81748919 -84901377 + ID4_ SINE ID 2 69 -14 3 1208 576 286 129 13 chrX 81749732 81749750 -84900546 - LTR82A LTR ERVL -438 434 374 3 1208 362 360 37 28 chrX 81749750 81749967 -84900329 - LTR82B Low_complexity ERVL -450 380 162 3 1208 576 286 129 13 chrX 81749967 81750070 -84900226 - LTR82A LTR ERVL -438 373 1 3 1208 752 257 43 5 chrX 81750129 81750336 -84899960 + Lx6 LINE L1 7236 7450 -10 3 1208 307 244 143 31 chrX 81751431 81751651 -84898645 + RMER10A LTR ERVL 2 287 -155 3 1208 1471 215 32 75 chrX 81751670 81752113 -84898183 - RMER10A LTR ERVL -1 441 18 3 1208 2788 138 54 20 chrX 81752114 81752616 -84897680 - Lx LINE L1 -6 6648 6130 3 1208 457 132 0 0 chrX 81752618 81752686 -84897610 + B2_Mm2 SINE B2 12 79 -116 3 1208 434 337 36 12 chrX 81752722 81752890 -84897406 + B3A SINE B2 27 198 0 3 1208 2147 121 15 6 chrX 81753956 81754290 -84896006 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1208 6534 57 12 18 chrX 81754292 81755147 -84895149 - IAPEz-int LTR ERVK -2 6479 5630 3 1208 23025 58 37 2 chrX 81755133 81758097 -84892199 - IAPEz-int LTR ERVK -3405 3076 8 3 1208 2147 121 15 6 chrX 81758097 81758431 -84891865 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1208 397 211 22 82 chrX 81758491 81758625 -84891671 + MLT1D LTR MaLR 12 137 -368 3 1208 1072 184 73 0 chrX 81758620 81758826 -84891470 - RMER15 LTR ERVL -18 557 337 3 1208 233 336 0 46 chrX 81759347 81759456 -84890840 + MIRb SINE MIR 119 222 -46 3 1208 243 0 0 0 chrX 81760056 81760083 -84890213 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 1208 223 238 46 31 chrX 81761589 81761654 -84888642 - MIRb SINE MIR -76 192 127 3 1208 625 370 48 48 chrX 81761964 81762254 -84888042 + B4A SINE B4 1 290 -2 3 1208 393 184 0 0 chrX 81762306 81762420 -84887876 + (CA)n Simple_repeat Simple_repeat 1 114 0 3 1208 336 89 0 0 chrX 81762439 81762484 -84887812 + HAL1-3A_ME LINE L1 1976 2020 -838 3 1208 244 25 24 48 chrX 81763229 81763271 -84887025 + (TTG)n Simple_repeat Simple_repeat 2 42 0 3 1208 4897 102 72 102 chrX 81765702 81766618 -84883678 - L1_Mus3 LINE L1 0 6638 5750 3 1208 21 82 0 0 chrX 81766692 81766741 -84883555 + AT_rich Low_complexity Low_complexity 1 49 0 3 1208 214 174 0 0 chrX 81766757 81766803 -84883493 + A-rich Low_complexity Low_complexity 3 48 0 3 1208 966 144 0 0 chrX 81766817 81766963 -84883333 + B1_Mus1 SINE Alu 2 147 -1 3 1208 528 116 0 0 chrX 81766963 81767058 -84883238 + (CAAAC)n Simple_repeat Simple_repeat 5 99 0 3 1208 351 44 0 0 chrX 81767178 81767223 -84883073 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 1208 2458 45 16 1 chrX 81767978 81768299 -84881997 - L1Md_F2 LINE L1 -667 5915 5572 3 1208 5967 27 1 0 chrX 81768299 81768994 -84881302 + L1Md_F2 LINE L1 5887 6582 0 3 1208 2219 69 65 10 chrX 81768994 81769009 -84881287 - L1Md_F2 LINE L1 -312 5571 5558 3 1208 3415 132 60 14 chrX 81769510 81770161 -84880135 - Lx LINE L1 -7 6647 5865 3 1208 3319 164 37 0 chrX 81770160 81770775 -84879521 - L1_Mur1 LINE L1 -347 5539 4902 3 1208 992 53 8 0 chrX 81770775 81770906 -84879390 + (GGGAA)n Simple_repeat Simple_repeat 5 136 0 3 1208 218 148 19 0 chrX 81770926 81770980 -84879316 + A-rich Low_complexity Low_complexity 4 58 0 3 1208 458 331 23 0 chrX 81771070 81771203 -84879093 - B1F1 SINE Alu -13 136 1 3 1208 1183 223 90 0 chrX 81774496 81774752 -84875544 + L1_Mur3 LINE L1 56 334 -7394 3 1208 1065 139 39 0 chrX 81774749 81774929 -84875367 + L1_Mur3 LINE L1 4142 4328 -1549 3 1208 786 184 12 31 chrX 81774934 81775097 -84875199 - Lx3C LINE L1 -252 6724 6565 3 1208 245 211 51 26 chrX 81775098 81775176 -84875120 + Lx3C LINE L1 6886 6965 -11 3 1208 1740 156 0 19 chrX 81775182 81775490 -84874806 + L1_Mur3 LINE L1 4324 4625 -1255 3 1208 1283 213 43 0 chrX 81775583 81775837 -84874459 + Lx6 LINE L1 6458 6722 -738 3 1208 21 0 0 0 chrX 81776146 81776167 -84874129 + AT_rich Low_complexity Low_complexity 1 21 0 3 1208 315 290 147 39 chrX 81776260 81776389 -84873907 + B4A SINE B4 138 280 -12 3 1208 23 33 0 0 chrX 81776831 81776861 -84873435 + AT_rich Low_complexity Low_complexity 1 30 0 3 1208 543 55 14 0 chrX 81776999 81777072 -84873224 + B1_Mm SINE Alu 74 147 0 3 1208 180 0 0 0 chrX 81778633 81778653 -84871643 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 3 1208 1146 47 7 0 chrX 81779470 81779620 -84870676 - L1Md_F2 LINE L1 -3 6579 6429 3 1208 375 105 0 0 chrX 81779697 81779754 -84870542 + (TA)n Simple_repeat Simple_repeat 2 58 0 3 1208 361 309 87 38 chrX 81780386 81780571 -84869725 + MIRb SINE MIR 67 260 -8 4 1208 24 53 0 0 chrX 81780724 81780762 -84869534 + AT_rich Low_complexity Low_complexity 1 38 0 4 1208 229 277 48 38 chrX 81780781 81780886 -84869410 - MIR SINE MIR -60 202 97 4 1208 793 309 70 40 chrX 81780983 81781354 -84868942 + Lx8 LINE L1 7091 7472 -1 4 1208 1480 130 0 0 chrX 81781657 81781880 -84868416 - Lx2 LINE L1 0 6997 6775 4 1208 3831 119 2 9 chrX 81781881 81782441 -84867855 - Lx2 LINE L1 -355 6642 6087 4 1208 3184 192 87 32 chrX 81782702 81783473 -84866823 - RLTR40 LTR ERVK -4 813 1 4 1208 416 147 47 0 chrX 81783475 81783604 -84866692 + (TCTCTG)n Simple_repeat Simple_repeat 4 138 0 4 1208 534 103 0 0 chrX 81783604 81783682 -84866614 + (CA)n Simple_repeat Simple_repeat 1 78 0 4 1208 44 20 0 0 chrX 81783814 81783865 -84866431 + AT_rich Low_complexity Low_complexity 1 51 0 4 18 38955 60 1 23 chrX 81784483 81791397 -84858899 - L1Md_T LINE L1 0 6582 99 4 1209 351 0 0 0 chrX 81791596 81791635 -84858661 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1209 459 0 0 0 chrX 81792237 81792288 -84858008 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 1209 1418 248 112 25 chrX 81792330 81792866 -84857430 - L1_Rod LINE L1 -7 5876 5260 4 1209 2475 105 8 24 chrX 81793011 81793391 -84856905 + L1_Mus3 LINE L1 6265 6638 0 4 1209 862 163 17 6 chrX 81793390 81793563 -84856733 + Lx2A1 LINE L1 6828 7002 -6 4 1209 363 255 71 0 chrX 81793734 81793832 -84856464 + PB1D10 SINE Alu 5 109 -8 4 1209 667 246 154 5 chrX 81794954 81795142 -84855154 + ID_B1 SINE B4 6 221 -3 4 1209 435 203 43 36 chrX 81795185 81795335 -84854961 + Lx4A LINE L1 6852 7052 -6 4 1209 201 74 0 0 chrX 81795484 81795511 -84854785 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1209 2853 84 5 31 chrX 81795979 81796397 -84853899 + MTB_Mm LTR MaLR 1 407 0 4 1209 325 78 0 0 chrX 81796777 81796828 -84853468 + L1_Mus1 LINE L1 6517 6567 0 4 1209 22 56 0 0 chrX 81796835 81796871 -84853425 + AT_rich Low_complexity Low_complexity 1 36 0 4 1209 4860 219 21 25 chrX 81797922 81798942 -84851354 - Lx5 LINE L1 0 7050 6036 4 1209 1477 37 89 0 chrX 81799417 81799607 -84850689 - L1_Mus2 LINE L1 -257 6309 6103 4 1209 597 103 44 23 chrX 81799694 81799802 -84850494 + L1_Mm LINE L1 5475 5593 -581 4 1209 22 56 0 0 chrX 81799828 81799864 -84850432 + AT_rich Low_complexity Low_complexity 1 36 0 4 1209 23 54 0 0 chrX 81800246 81800283 -84850013 + AT_rich Low_complexity Low_complexity 1 37 0 4 1209 253 320 26 0 chrX 81800298 81800376 -84849920 + ID4 SINE ID 2 81 -2 4 1209 878 45 97 15 chrX 81800735 81800869 -84849427 + L1_Mus2 LINE L1 6420 6564 -2 4 1209 223 50 49 24 chrX 81801272 81801313 -84848983 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 4 1209 1101 261 91 25 chrX 81803494 81803852 -84846444 + MTD LTR MaLR 32 405 -14 4 1209 451 127 13 0 chrX 81804391 81804470 -84845826 - L1_Mus1 LINE L1 -21 6546 6467 4 1209 28340 78 7 1 chrX 81804442 81808692 -84841604 - L1Md_F2 LINE L1 -372 6636 2027 4 1209 209 57 29 0 chrX 81808702 81808737 -84841559 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 1209 191 276 17 17 chrX 81808865 81808924 -84841372 + MIRc SINE MIR 203 261 -7 4 1209 23 0 0 0 chrX 81809624 81809647 -84840649 + AT_rich Low_complexity Low_complexity 1 23 0 4 1209 300 24 0 0 chrX 81809647 81809689 -84840607 - L1_Mus1 LINE L1 -2 6565 6524 4 1209 3664 77 4 0 chrX 81809686 81810166 -84840130 + L1_Mus1 LINE L1 6083 6564 -3 4 1209 627 294 0 18 chrX 81810924 81811087 -84839209 + MER5B DNA MER1_type 16 175 -3 4 1209 201 302 0 0 chrX 81811681 81811734 -84838562 - L2 LINE L2 -1392 2027 1975 4 1209 352 274 0 31 chrX 81811802 81811900 -84838396 - MER5A1 DNA MER1_type -1 165 71 4 1209 388 201 37 34 chrX 81811948 81812110 -84838186 - Lx4B LINE L1 0 7050 6888 4 1209 342 273 75 67 chrX 81813773 81814040 -84836256 - L1ME2z LINE L1 -144 6300 6032 4 1209 1004 79 208 6 chrX 81814243 81814421 -84835875 + L1Md_F2 LINE L1 6369 6582 0 4 1209 1155 75 0 0 chrX 81814460 81814619 -84835677 + (GAAA)n Simple_repeat Simple_repeat 2 160 0 4 1209 189 0 0 0 chrX 81816857 81816878 -84833418 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1209 284 324 85 39 chrX 81817191 81817496 -84832800 - L1ME3A LINE L1 -40 6133 5815 4 1209 456 117 0 0 chrX 81817510 81817587 -84832709 + (TAGA)n Simple_repeat Simple_repeat 4 80 0 4 1209 291 287 7 110 chrX 81817627 81817676 -84832620 + MT2B2 LTR ERVL 124 233 -351 4 1209 520 125 0 0 chrX 81817676 81817752 -84832544 + B1_Mus1 SINE Alu 2 77 -71 4 1209 662 61 0 30 chrX 81817752 81817853 -84832443 + (TA)n Simple_repeat Simple_repeat 2 99 0 4 1209 291 287 7 110 chrX 81817853 81817872 -84832424 + MT2B2 LTR ERVL 234 252 -332 4 1209 462 214 28 37 chrX 81817872 81817883 -84832413 + PB1D9 SINE Alu 79 106 -14 4 1209 22 0 0 0 chrX 81818059 81818081 -84832215 + AT_rich Low_complexity Low_complexity 1 22 0 4 1209 3191 68 2 0 chrX 81818531 81818941 -84831355 + L1_Mus1 LINE L1 6157 6567 0 4 1209 302 333 12 0 chrX 81819307 81819388 -84830908 - RSINE1 SINE B4 -75 90 9 4 1209 392 343 77 54 chrX 81819429 81819651 -84830645 - LTR16C LTR ERVL -5 484 258 4 1209 306 0 0 0 chrX 81819651 81819685 -84830611 + (T)n Simple_repeat Simple_repeat 1 34 0 4 1209 506 268 71 14 chrX 81820389 81820529 -84829767 - B4 SINE B4 -20 272 125 4 1209 585 64 0 0 chrX 81821238 81821316 -84828980 + (TTGG)n Simple_repeat Simple_repeat 2 79 0 4 1209 215 273 114 57 chrX 81821488 81821593 -84828703 - PB1D10 SINE Alu 0 117 7 4 1209 451 276 106 38 chrX 81821534 81821666 -84828630 - ID_B1 SINE B4 -76 148 8 4 1209 6396 48 0 2 chrX 81822065 81822853 -84827443 - L1Md_T LINE L1 -1 6581 5796 4 1209 489 34 0 0 chrX 81825024 81825083 -84825213 + (TTTTC)n Simple_repeat Simple_repeat 2 60 0 4 1209 729 200 0 29 chrX 81825083 81825222 -84825074 - B1_Mur4 SINE Alu -2 148 14 4 1209 23 54 0 0 chrX 81825337 81825374 -84824922 + AT_rich Low_complexity Low_complexity 1 37 0 4 1209 543 101 0 0 chrX 81825898 81825977 -84824319 + (CA)n Simple_repeat Simple_repeat 2 80 0 4 1209 32 26 0 0 chrX 81826580 81826619 -84823677 + AT_rich Low_complexity Low_complexity 1 39 0 4 1209 2479 110 3 16 chrX 81826632 81827011 -84823285 - Lx LINE L1 0 6654 6281 4 1209 351 44 0 0 chrX 81827698 81827743 -84822553 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1209 333 244 113 74 chrX 81827949 81828179 -84822117 + L1MB4 LINE L1 397 635 -5907 4 1209 353 310 149 24 chrX 81828330 81828879 -84821417 + L1MB4 LINE L1 2973 3590 -3054 4 1209 326 288 30 14 chrX 81829083 81829230 -84821066 + L1MB4 LINE L1 3972 4117 -2521 4 1209 392 328 161 24 chrX 81829285 81829695 -84820601 + L1MA7 LINE L1 5825 6290 -1 4 1209 564 367 46 21 chrX 81829789 81830070 -84820226 + B4A SINE B4 2 289 -3 4 1209 375 105 0 0 chrX 81830086 81830143 -84820153 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1209 441 234 98 76 chrX 81830189 81830425 -84819871 + L1MB4 LINE L1 5574 5814 -830 4 1209 1019 132 46 0 chrX 81830458 81830632 -84819664 + L1_Mus3 LINE L1 6450 6631 -7 4 1209 24 0 0 0 chrX 81830632 81830656 -84819640 + AT_rich Low_complexity Low_complexity 1 24 0 4 1209 272 268 0 157 chrX 81830884 81830986 -84819310 + B1_Mur2 SINE Alu 63 148 -1 4 1209 275 311 79 56 chrX 81831077 81831343 -84818953 + L1MB4 LINE L1 6128 6399 -279 4 1209 235 298 56 16 chrX 81831438 81831564 -84818732 + L1MB7 LINE L1 6053 6183 -1 4 1209 1714 109 4 33 chrX 81831571 81831846 -84818450 + Lx3A LINE L1 6712 6978 -3 4 1209 22 35 0 0 chrX 81831847 81831876 -84818420 + AT_rich Low_complexity Low_complexity 1 29 0 4 1209 5400 233 59 25 chrX 81833350 81834619 -84815677 - Lx6 LINE L1 -262 7198 5887 4 1209 2335 104 17 17 chrX 81834740 81835092 -84815204 - Lx3_Mus LINE L1 0 7009 6658 4 1209 729 143 0 0 chrX 81835225 81835337 -84814959 + L1VL1 LINE L1 51 162 -6260 4 1209 32636 119 42 25 chrX 81835337 81837069 -84813227 + L1Md_F LINE L1 244 1976 -3907 4 1209 315 0 0 0 chrX 81837069 81837104 -84813192 + (CAA)n Simple_repeat Simple_repeat 2 36 0 4 1209 32636 77 5 7 chrX 81837104 81840839 -84809457 + L1Md_F LINE L1 1977 5720 -163 4 1209 709 63 11 0 chrX 81840839 81840934 -84809362 - ORR1A1 LTR MaLR 0 346 251 4 1209 2640 85 13 26 chrX 81840937 81841323 -84808973 + L1Md_F2 LINE L1 6191 6571 -11 4 1209 2917 81 2 0 chrX 81841343 81841750 -84808546 + MusHAL1 LINE L1 978 1385 -1327 4 1209 2002 229 53 89 chrX 81841748 81842416 -84807880 - Lx6 LINE L1 -1154 6306 5658 4 1209 210 212 206 29 chrX 81842881 81842949 -84807347 - ID4_ SINE ID 0 83 4 4 1209 2155 186 5 5 chrX 81842997 81843391 -84806905 - ORR1B1 LTR MaLR 0 394 1 4 1209 472 243 10 10 chrX 81845916 81846020 -84804276 - Lx5 LINE L1 -175 6875 6772 4 1209 371 190 10 79 chrX 81846011 81846161 -84804135 + Lx4B LINE L1 6895 7052 -6 4 1209 292 352 69 0 chrX 81846688 81846833 -84803463 + L2 LINE L2 2325 2479 -940 4 1209 258 341 0 0 chrX 81847214 81847296 -84803000 - ID4 SINE ID 0 83 2 4 1209 234 0 0 0 chrX 81847823 81847849 -84802447 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 4 1209 442 317 81 11 chrX 81848747 81848932 -84801364 - MER3 DNA MER1_type 0 209 12 4 1209 332 43 0 21 chrX 81850089 81850136 -84800160 + (TTTTG)n Simple_repeat Simple_repeat 3 48 0 4 1209 237 396 48 12 chrX 81850324 81850490 -84799806 + L2 LINE L2 2828 2999 -420 4 1209 365 227 56 21 chrX 81850678 81850822 -84799474 - L1MA6 LINE L1 -1 6299 6151 4 1209 213 369 146 32 chrX 81850873 81851189 -84799107 - L2 LINE L2 -711 2708 2357 4 1209 390 129 0 0 chrX 81851255 81851317 -84798979 + (TCC)n Simple_repeat Simple_repeat 1 62 0 4 1209 38532 4 0 0 chrX 81852947 81858296 -84792000 + L1Md_A LINE L1 237 5586 -297 5 1209 8970 5 0 0 chrX 81858296 81859292 -84791004 + L1Md_A LINE L1 5587 6582 0 5 1209 250 330 28 57 chrX 81859758 81859864 -84790432 - B1F1 SINE Alu -46 103 1 5 1209 641 267 7 27 chrX 81860698 81860848 -84789448 + B1_Mur1 SINE Alu 2 148 -1 5 1209 1450 282 20 9 chrX 81862426 81862769 -84787527 - ORR1E LTR MaLR 0 359 13 5 1209 606 259 145 5 chrX 81862778 81862964 -84787332 - ORR1E-int LTR MaLR -10 1360 1149 5 1209 2039 328 73 62 chrX 81862979 81863988 -84786308 - ORR1E-int LTR MaLR -544 1036 17 5 1209 729 304 61 67 chrX 81864001 81864360 -84785936 - ORR1E LTR MaLR 0 359 3 5 1209 379 373 66 21 chrX 81864519 81864760 -84785536 + L3 LINE CR1 3523 3774 -715 5 1209 7174 110 35 5 chrX 81865004 81866550 -84783746 + Lx LINE L1 5034 6640 -14 5 1209 459 52 0 0 chrX 81866550 81866608 -84783688 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 1209 248 354 65 42 chrX 81866764 81866932 -84783364 + MER5A DNA MER1_type 11 182 -7 5 1209 342 0 0 0 chrX 81867052 81867090 -84783206 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1209 21 36 0 0 chrX 81868691 81868719 -84781577 + AT_rich Low_complexity Low_complexity 1 28 0 5 1209 36 0 0 0 chrX 81869683 81869719 -84780577 + AT_rich Low_complexity Low_complexity 1 36 0 5 1209 28 0 0 0 chrX 81869742 81869770 -84780526 + AT_rich Low_complexity Low_complexity 1 28 0 5 1209 3471 84 10 0 chrX 81869819 81870320 -84779976 - MusHAL1 LINE L1 -1177 1535 1030 5 1209 7201 84 25 3 chrX 81870319 81871537 -84778759 + L1_Mus4 LINE L1 5386 6630 -6 5 1209 340 19 58 0 chrX 81874768 81874820 -84775476 + (CAAAAA)n Simple_repeat Simple_repeat 6 60 0 5 1209 508 326 75 10 chrX 81875013 81875209 -84775087 - B3A SINE B2 -4 212 6 5 1209 22 0 0 0 chrX 81875212 81875234 -84775062 + AT_rich Low_complexity Low_complexity 1 22 0 5 1209 30 0 0 0 chrX 81876025 81876055 -84774241 + AT_rich Low_complexity Low_complexity 1 30 0 5 1209 226 364 108 66 chrX 81876155 81876396 -84773900 + L3 LINE CR1 3383 3633 -856 5 1209 22 56 0 0 chrX 81877399 81877435 -84772861 + AT_rich Low_complexity Low_complexity 1 36 0 5 1209 21 71 0 0 chrX 81878705 81878747 -84771549 + AT_rich Low_complexity Low_complexity 1 42 0 5 1209 21 36 0 0 chrX 81879294 81879322 -84770974 + AT_rich Low_complexity Low_complexity 1 28 0 5 1209 24095 169 30 11 chrX 81879938 81885907 -84764389 - Lx5 LINE L1 0 7050 900 5 1209 23 0 0 0 chrX 81886155 81886178 -84764118 + AT_rich Low_complexity Low_complexity 1 23 0 5 1209 7809 120 6 2 chrX 81886325 81887506 -84762790 - Lx2 LINE L1 -2 6995 5810 5 1209 2739 146 121 3 chrX 81887506 81888169 -84762127 + Lx LINE L1 5908 6648 -6 5 1209 435 38 0 0 chrX 81888244 81888297 -84761999 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1209 647 362 58 82 chrX 81888574 81889025 -84761271 - LTR16A LTR ERVL -13 443 4 5 1209 742 237 11 21 chrX 81889060 81889250 -84761046 - MER5A DNA MER1_type -1 188 1 5 1209 195 42 0 0 chrX 81891287 81891311 -84758985 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 1209 218 372 71 0 chrX 81891522 81891635 -84758661 - MIRm SINE MIR -154 122 2 5 1209 336 238 0 48 chrX 81892071 81892155 -84758141 - ID2 SINE ID 0 83 4 5 1209 21 0 0 0 chrX 81892857 81892878 -84757418 + AT_rich Low_complexity Low_complexity 1 21 0 5 1209 21 57 0 0 chrX 81893970 81894005 -84756291 + AT_rich Low_complexity Low_complexity 1 35 0 5 1209 247 310 97 0 chrX 81894100 81894213 -84756083 + RMER12 LTR ERVK 733 856 -466 5 1209 1015 60 0 7 chrX 81894395 81894530 -84755766 + B1_Mus2 SINE Alu 1 134 -13 5 1209 276 0 22 43 chrX 81894530 81894576 -84755720 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 5 1209 285 29 0 0 chrX 81894603 81894637 -84755659 + (TTG)n Simple_repeat Simple_repeat 2 35 0 5 1209 198 0 0 0 chrX 81895728 81895750 -84754546 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 5 1209 1449 161 112 17 chrX 81895834 81896130 -84754166 - ORR1A3 LTR MaLR 0 326 3 5 1209 552 15 0 0 chrX 81896132 81896197 -84754099 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1209 4008 106 33 0 chrX 81896846 81897420 -84752876 - MT2B LTR ERVL -8 593 1 5 1209 1810 116 51 44 chrX 81897423 81897739 -84752557 - L1Md_F2 LINE L1 -10 6572 6255 5 1209 603 40 0 0 chrX 81897835 81897909 -84752387 + (TC)n Simple_repeat Simple_repeat 1 74 0 5 1209 301 351 32 0 chrX 81898858 81898952 -84751344 + PB1D10 SINE Alu 11 107 -10 5 1209 194 274 161 0 chrX 81899820 81899882 -84750414 - MIR SINE MIR 0 262 191 5 1209 734 127 0 0 chrX 81900114 81900224 -84750072 - Lx3B LINE L1 -1265 5708 5599 5 1209 219 338 0 0 chrX 81900540 81900620 -84749676 + MIRc SINE MIR 150 229 -39 5 1209 249 339 35 35 chrX 81902202 81902315 -84747981 + L2a LINE L2 3302 3414 -12 5 1209 1414 72 5 0 chrX 81902382 81902576 -84747720 + L1_Mus1 LINE L1 6370 6564 -3 5 1209 249 33 0 0 chrX 81902756 81902786 -84747510 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1209 365 373 84 14 chrX 81902818 81903033 -84747263 - Lx8 LINE L1 -173 7300 7071 5 1209 571 112 0 10 chrX 81903168 81903267 -84747029 - L1_Mus3 LINE L1 -7 6631 6534 5 1209 224 341 35 0 chrX 81903475 81903560 -84746736 + MIR SINE MIR 160 247 -15 5 1209 21 71 0 0 chrX 81903878 81903920 -84746376 + AT_rich Low_complexity Low_complexity 1 42 0 5 1209 261 268 55 82 chrX 81904112 81904295 -84746001 + Lx7 LINE L1 7507 7684 -12 5 1209 23 0 0 0 chrX 81904680 81904703 -84745593 + AT_rich Low_complexity Low_complexity 1 23 0 5 1209 582 169 17 8 chrX 81904830 81904949 -84745347 - RMER1B Other Other 0 1066 947 5 1209 369 43 0 0 chrX 81905323 81905370 -84744926 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1209 4210 122 9 20 chrX 81906917 81907575 -84742721 - Lx4A LINE L1 -3 7055 6405 5 1209 228 244 0 49 chrX 81909876 81909958 -84740338 + GA-rich Low_complexity Low_complexity 6 83 0 5 1209 327 303 104 49 chrX 81910435 81910598 -84739698 + MLT1H LTR MaLR 23 194 -355 5 1209 1040 319 67 32 chrX 81911950 81912106 -84738190 - Lx9 LINE L1 -27 7617 7448 5 1209 486 0 0 0 chrX 81912106 81912160 -84738136 + (GA)n Simple_repeat Simple_repeat 2 55 0 5 1209 1040 319 67 32 chrX 81912160 81912635 -84737661 - Lx9 LINE L1 -197 7447 6964 5 1209 363 176 9 29 chrX 81912650 81912755 -84737541 - Lx9 LINE L1 0 7644 7542 5 1209 1071 64 0 0 chrX 81912776 81912916 -84737380 + (TCTA)n Simple_repeat Simple_repeat 3 142 0 5 1209 1748 287 79 16 chrX 81912925 81913485 -84736811 - Lx9 LINE L1 -661 6983 6389 5 1209 22 0 0 0 chrX 81913944 81913966 -84736330 + AT_rich Low_complexity Low_complexity 1 22 0 5 1209 493 256 37 37 chrX 81914231 81914393 -84735903 - RSINE1 SINE B4 0 165 4 5 1209 330 26 0 0 chrX 81914608 81914647 -84735649 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1209 243 0 0 0 chrX 81914647 81914674 -84735622 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 1209 58 78 0 0 chrX 81915356 81915484 -84734812 + AT_rich Low_complexity Low_complexity 1 128 0 5 1209 188 174 43 0 chrX 81915484 81915576 -84734720 + (TA)n Simple_repeat Simple_repeat 2 97 0 5 1209 40 37 0 0 chrX 81915683 81915737 -84734559 + AT_rich Low_complexity Low_complexity 1 54 0 5 1209 23 0 0 0 chrX 81916512 81916535 -84733761 + AT_rich Low_complexity Low_complexity 1 23 0 5 1209 225 244 48 60 chrX 81916831 81916914 -84733382 + RLTR13B1 LTR ERVK 251 332 -561 5 1210 23 33 0 0 chrX 81921547 81921577 -84728719 + AT_rich Low_complexity Low_complexity 1 30 0 5 1210 271 70 70 0 chrX 81921868 81921925 -84728371 + (CAGAGA)n Simple_repeat Simple_repeat 2 62 0 5 1210 211 268 54 0 chrX 81924150 81924206 -84726090 + BC1_Mm scRNA scRNA 6 64 -88 5 1210 2000 89 3 23 chrX 81924245 81924555 -84725741 - L1Md_F2 LINE L1 -2 6580 6277 5 1210 1409 97 79 4 chrX 81924723 81924950 -84725346 + Lx2 LINE L1 6753 6996 -1 5 1210 324 0 0 0 chrX 81924978 81925014 -84725282 + (GTTTG)n Simple_repeat Simple_repeat 5 40 0 5 1210 1135 68 0 13 chrX 81925035 81925184 -84725112 - B1_Mm SINE Alu 0 147 1 5 1210 391 32 63 0 chrX 81926231 81926294 -84724002 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 5 1210 381 43 0 0 chrX 81926298 81926345 -84723951 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 1210 234 0 0 0 chrX 81926345 81926370 -84723926 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 1210 186 189 0 0 chrX 81926370 81926407 -84723889 + (CGTG)n Simple_repeat Simple_repeat 1 37 0 5 1210 1095 201 177 8 chrX 81927412 81927678 -84722618 + MTC LTR MaLR 111 421 0 5 1210 3408 173 64 18 chrX 81927916 81928285 -84722011 - RMER6D LTR ERVK -17 703 334 5 1210 477 0 0 0 chrX 81928285 81928338 -84721958 + (TC)n Simple_repeat Simple_repeat 1 53 0 5 1210 3408 173 64 18 chrX 81928338 81928640 -84721656 - RMER6D LTR ERVK -387 333 2 5 1210 890 315 89 48 chrX 81930093 81930507 -84719789 + MLT1D LTR MaLR 6 436 -69 5 1210 529 305 89 11 chrX 81931841 81932020 -84718276 + MIRc SINE MIR 4 196 -72 5 1210 4987 56 1 0 chrX 81932578 81933266 -84717030 - L1Md_F2 LINE L1 -650 5932 5244 5 1210 4928 63 5 8 chrX 81933266 81933918 -84716378 + L1Md_F2 LINE L1 5932 6581 -1 5 1210 3673 204 20 23 chrX 81933945 81934739 -84715557 - Lx5 LINE L1 -1 7049 6258 5 1210 3307 172 28 18 chrX 81934739 81935457 -84714839 + Lx5 LINE L1 5523 6255 -795 5 1210 305 342 79 16 chrX 81936593 81936783 -84713513 + L1MD3 LINE L1 7788 7989 -6 5 1210 1359 108 13 30 chrX 81937534 81937764 -84712532 - L1_Mus3 LINE L1 -2 6636 6411 5 1210 22 0 0 0 chrX 81937779 81937801 -84712495 + AT_rich Low_complexity Low_complexity 1 22 0 5 1210 321 42 0 0 chrX 81938000 81938048 -84712248 - Lx2 LINE L1 -1 6996 6949 5 1210 3930 92 2 4 chrX 81938055 81938611 -84711685 - L1_Mus1 LINE L1 -1 6566 6012 5 1210 200 203 71 86 chrX 81939040 81939110 -84711186 + MIRb SINE MIR 174 242 -26 5 1210 227 300 25 12 chrX 81939430 81939511 -84710785 - ID4 SINE ID 0 83 2 5 1210 639 279 129 22 chrX 81940850 81941298 -84708998 + HAL1 LINE L1 967 1462 -1045 6 1210 709 82 9 9 chrX 81941377 81941488 -84708808 + (TAGA)n Simple_repeat Simple_repeat 2 112 0 6 1210 21 0 0 0 chrX 81941560 81941581 -84708715 + AT_rich Low_complexity Low_complexity 1 21 0 6 1210 1004 298 29 11 chrX 81941581 81941931 -84708365 + Lx9 LINE L1 7101 7456 -188 6 1210 306 0 0 0 chrX 81941931 81941965 -84708331 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1210 392 293 0 35 chrX 81941990 81942075 -84708221 + RSINE1 SINE B4 49 130 -35 6 1210 704 313 59 11 chrX 81942722 81943009 -84707287 + L1MB5 LINE L1 5842 6142 -32 6 1210 237 132 0 0 chrX 81943371 81943409 -84706887 + (CAA)n Simple_repeat Simple_repeat 2 39 0 6 1210 308 413 61 26 chrX 81943641 81943872 -84706424 - LTR16C LTR ERVL -207 282 44 6 1210 774 301 28 25 chrX 81944176 81944459 -84705837 + B4A SINE B4 3 286 -6 6 1210 414 53 0 0 chrX 81944590 81944647 -84705649 + (TATG)n Simple_repeat Simple_repeat 2 58 0 6 1210 1769 273 33 27 chrX 81944648 81945231 -84705065 - Lx6 LINE L1 -30 7430 6486 6 1210 233 346 24 12 chrX 81945339 81945421 -84704875 + MER20 DNA MER1_type 137 219 0 6 1210 1174 91 57 11 chrX 81945950 81946127 -84704169 + B2_Mm2 SINE B2 2 186 -9 6 1210 5869 83 4 1 chrX 81946133 81946929 -84703367 + L1_Mus1 LINE L1 5768 6565 -2 6 1210 568 296 5 30 chrX 81947068 81947270 -84703026 + Lx9 LINE L1 7242 7438 -206 6 1210 414 0 0 0 chrX 81947289 81947335 -84702961 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 1210 371 176 40 56 chrX 81947339 81947465 -84702831 + Lx9 LINE L1 7517 7640 -4 6 1210 23 78 0 0 chrX 81947724 81947775 -84702521 + AT_rich Low_complexity Low_complexity 1 51 0 6 1210 32 0 0 0 chrX 81947896 81947928 -84702368 + AT_rich Low_complexity Low_complexity 1 32 0 6 1210 1053 283 98 36 chrX 81947928 81948478 -84701818 + L1MD3 LINE L1 7322 7905 -90 6 1210 575 299 66 10 chrX 81948513 81948950 -84701346 - L1MDa LINE L1 -3625 2912 2446 6 1210 454 284 162 0 chrX 81949023 81949171 -84701125 - MTD LTR MaLR -51 368 197 6 1210 402 148 0 0 chrX 81949174 81949235 -84701061 - Lx4B LINE L1 -98 6960 6900 6 1210 333 372 25 5 chrX 81949242 81949439 -84700857 + L1M4 LINE L1 4639 4839 -1307 6 1210 3933 60 0 4 chrX 81949504 81950003 -84700293 - L1Md_F3 LINE L1 -11 6573 6077 6 1210 2662 28 12 0 chrX 81950003 81950326 -84699970 + L1Md_F3 LINE L1 5731 6057 -527 6 1210 309 293 33 85 chrX 81950403 81950556 -84699740 + L1MD2 LINE L1 4936 5080 -1066 6 1210 279 0 0 0 chrX 81950639 81950670 -84699626 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1210 462 18 0 0 chrX 81950670 81950724 -84699572 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 1210 940 284 120 29 chrX 81950770 81951361 -84698935 + L1MD2 LINE L1 5303 5947 -412 6 1210 588 296 345 67 chrX 81951416 81951710 -84698586 + ORR1E LTR MaLR 4 379 0 6 1210 231 310 8 34 chrX 81951711 81951828 -84698468 + L1MD2 LINE L1 6000 6113 -129 6 1210 1696 36 9 9 chrX 81952976 81953198 -84697098 - L1Md_F3 LINE L1 0 6584 6363 6 1210 571 262 33 0 chrX 81953310 81953432 -84696864 + RSINE1 SINE B4 15 140 -25 6 1210 243 61 0 0 chrX 81953436 81953469 -84696827 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1210 700 236 139 14 chrX 81953606 81953829 -84696467 - Lx8 LINE L1 -3 7470 7220 6 1210 644 288 60 75 chrX 81953957 81954209 -84696087 + B4A SINE B4 4 251 -41 6 1210 200 211 0 0 chrX 81954230 81954268 -84696028 + GA-rich Low_complexity Low_complexity 1 38 0 6 1210 1031 56 35 14 chrX 81955128 81955272 -84695024 - B1_Mus2 SINE Alu 0 147 1 6 1210 4319 37 7 11 chrX 81956622 81957164 -84693132 + L1Md_F2 LINE L1 6040 6579 -3 6 1210 299 195 128 34 chrX 81957864 81957981 -84692315 + Lx9 LINE L1 7517 7644 0 6 1210 791 287 0 0 chrX 81959172 81959353 -84690943 - RMER30 DNA MER1_type -21 181 1 6 1210 1159 68 7 0 chrX 81959960 81960107 -84690189 + B1_Mus1 SINE Alu 1 148 0 6 1210 548 290 145 28 chrX 81960160 81960415 -84689881 + B4A SINE B4 2 286 -6 6 1210 3160 100 17 2 chrX 81960523 81960986 -84689310 - Lx3_Mus LINE L1 -5 7004 6535 6 1210 593 301 15 25 chrX 81960987 81961191 -84689105 - Lx9 LINE L1 -228 7416 7215 6 1210 371 307 80 51 chrX 81961348 81961523 -84688773 + B3A SINE B2 1 180 -18 6 1210 349 116 0 28 chrX 81962266 81962337 -84687959 + (TG)n Simple_repeat Simple_repeat 2 70 0 6 1210 3305 126 64 9 chrX 81962467 81963013 -84687283 - Lx2 LINE L1 -1 6996 6421 6 1210 358 356 58 58 chrX 81963058 81963231 -84687065 + MER63A DNA AcHobo 37 209 -1 6 1210 1132 225 113 30 chrX 81963593 81963928 -84686368 + Lx2B LINE L1 6634 6996 -4 6 1210 274 325 13 0 chrX 81964027 81964104 -84686192 + B1F SINE Alu 67 144 -5 6 1210 232 320 78 54 chrX 81964197 81964326 -84685970 + B1F SINE Alu 18 149 0 6 1210 702 134 329 6 chrX 81964351 81964509 -84685787 + B3 SINE B2 5 213 -3 6 1210 513 0 0 0 chrX 81964672 81964729 -84685567 + (TTTC)n Simple_repeat Simple_repeat 4 60 0 6 1210 1494 286 35 76 chrX 81964733 81965006 -84685290 - Lx6 LINE L1 -26 7434 7192 6 1210 1737 42 9 5 chrX 81965006 81965224 -84685072 - L1_Mus1 LINE L1 -1 6566 6348 6 1210 1494 264 197 38 chrX 81965224 81965697 -84684599 - Lx6 LINE L1 -269 7191 6624 6 1210 2523 77 0 38 chrX 81966281 81966648 -84683648 + L1_Mus1 LINE L1 6214 6566 -1 6 1210 279 236 34 0 chrX 81966732 81966821 -84683475 + (TA)n Simple_repeat Simple_repeat 1 92 0 6 1210 332 318 61 48 chrX 81967150 81967315 -84682981 - MER5A DNA MER1_type -18 171 5 6 1210 285 324 111 44 chrX 81968676 81968857 -84681439 + LTR16C LTR ERVL 257 449 -40 6 1210 23 0 0 0 chrX 81970539 81970562 -84679734 + AT_rich Low_complexity Low_complexity 1 23 0 6 1210 24 0 0 0 chrX 81970808 81970832 -84679464 + AT_rich Low_complexity Low_complexity 1 24 0 6 1210 415 77 0 0 chrX 81972551 81972603 -84677693 + Lx7 LINE L1 6898 6949 -747 6 1210 260 303 0 29 chrX 81973441 81973543 -84676753 - Lx7 LINE L1 -1 7695 7597 6 1210 1781 214 20 15 chrX 81973516 81973909 -84676387 - Lx7 LINE L1 -549 7147 6753 6 1210 3792 214 70 28 chrX 81973944 81975235 -84675061 + Lx7 LINE L1 5358 6735 -961 6 1210 3866 186 56 105 chrX 81975709 81975831 -84674465 - RMER19B LTR ERVK -6 896 766 6 1210 386 0 41 0 chrX 81975831 81975880 -84674416 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 6 1210 3866 186 56 105 chrX 81975880 81976575 -84673721 - RMER19B LTR ERVK -137 765 77 6 1210 3445 93 15 0 chrX 81976575 81977050 -84673246 + L1_Mus1 LINE L1 6078 6559 -8 6 1210 3866 186 56 105 chrX 81977050 81977173 -84673123 - RMER19B LTR ERVK -826 76 3 6 1210 376 325 70 6 chrX 81977319 81977477 -84672819 - Lx8 LINE L1 -902 6571 6404 6 1210 452 262 86 35 chrX 81977575 81977832 -84672464 - Charlie5 DNA MER1_type -86 2538 2269 6 1210 244 372 25 8 chrX 81977857 81977979 -84672317 - Charlie5 DNA MER1_type -2493 131 8 6 1210 2192 169 27 68 chrX 81978122 81978202 -84672094 + MTC LTR MaLR 1 69 -352 6 1210 994 30 8 0 chrX 81978202 81978335 -84671961 + L1Md_F2 LINE L1 6434 6567 -15 6 1210 2192 169 27 68 chrX 81978335 81978693 -84671603 + MTC LTR MaLR 70 421 0 6 1210 215 31 31 0 chrX 81978740 81978772 -84671524 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 1210 1721 244 14 54 chrX 81978786 81979214 -84671082 - Lx6 LINE L1 -26 7434 7024 6 1210 27 0 0 0 chrX 81980223 81980250 -84670046 + AT_rich Low_complexity Low_complexity 1 27 0 6 1210 705 284 47 47 chrX 81980385 81980684 -84669612 - RMER5 LTR ERV1 -4 530 232 6 1210 34121 88 12 3 chrX 81980975 81987304 -84662992 - L1Md_F2 LINE L1 -12 6570 186 6 1210 5992 15 0 0 chrX 81987984 81988664 -84661632 - L1Md_A LINE L1 0 6582 5903 6 1210 311 281 49 0 chrX 81990509 81990591 -84659705 + 4.5SRNA scRNA scRNA 1 86 -8 6 1210 248 294 138 21 chrX 81990591 81990602 -84659694 + PB1D10 SINE Alu 2 105 -12 6 1210 252 184 229 34 chrX 81990943 81991061 -84659235 + Lx8 LINE L1 7333 7473 0 6 1210 448 360 24 48 chrX 81991125 81991376 -84658920 - Lx8 LINE L1 -151 7322 7078 6 1210 190 377 13 0 chrX 81992282 81992359 -84657937 - L2b LINE L2 -35 3340 3263 6 1210 468 0 0 0 chrX 81992503 81992555 -84657741 + (TC)n Simple_repeat Simple_repeat 1 52 0 6 1210 225 307 0 39 chrX 81992655 81992733 -84657563 + ID4_ SINE ID 3 77 -6 6 1210 24 32 0 0 chrX 81993920 81993951 -84656345 + AT_rich Low_complexity Low_complexity 1 31 0 6 1210 1229 249 82 9 chrX 81994097 81994425 -84655871 - Lx8 LINE L1 -9 7464 7113 6 1210 286 315 9 43 chrX 81994769 81994885 -84655411 - LTR33B LTR ERVL -5 498 387 6 1210 3754 110 7 21 chrX 81995257 81995823 -84654473 + Lx LINE L1 6097 6654 0 6 1210 348 24 0 0 chrX 81996671 81996712 -84653584 + (TTA)n Simple_repeat Simple_repeat 1 41 0 6 1210 3880 122 7 2 chrX 81996713 81997286 -84653010 - Lx3B LINE L1 -7 6966 6391 6 1210 1601 155 58 0 chrX 81997299 81997576 -84652720 + Lx3B LINE L1 6100 6392 -581 6 1210 607 205 8 8 chrX 81999677 81999805 -84650491 - URR1A DNA MER1_type -18 208 81 6 1210 1068 345 38 9 chrX 82001105 82001555 -84648741 - Lx8 LINE L1 -199 7274 6812 1 1210 537 16 0 0 chrX 82002207 82002269 -84648027 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 2 1210 311 247 21 0 chrX 82002279 82002376 -84647920 + (TA)n Simple_repeat Simple_repeat 1 99 0 3 1210 699 382 90 36 chrX 82002830 82003362 -84646934 - LTR83 LTR ERVL -85 695 135 4 1210 1793 211 68 2 chrX 82004046 82004441 -84645855 + MTC LTR MaLR 1 421 0 5 1210 356 279 0 0 chrX 82004959 82005038 -84645258 + ID4 SINE ID 5 83 0 6 1210 193 417 10 0 chrX 82005273 82005369 -84644927 + MIRb SINE MIR 46 142 -126 7 1210 1095 231 0 5 chrX 82005393 82005602 -84644694 + B3 SINE B2 3 210 -6 8 1210 2456 264 29 29 chrX 82007326 82008014 -84642282 - Lx6 LINE L1 -4 7456 6769 9 1210 2510 17 0 0 chrX 82008011 82008301 -84641995 - L1Md_F3 LINE L1 -465 6119 5830 1 1210 3932 29 23 2 chrX 82008301 82008783 -84641513 + L1Md_F3 LINE L1 6093 6584 0 1 1210 324 0 0 0 chrX 82008799 82008835 -84641461 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1210 246 216 22 22 chrX 82009311 82009401 -84640895 + GA-rich Low_complexity Low_complexity 4 93 0 1 1210 229 255 53 0 chrX 82010320 82010414 -84639882 - Charlie10 DNA MER1_type -26 2796 2698 1 1210 700 301 149 9 chrX 82010476 82010791 -84639505 + Lx8 LINE L1 7060 7418 -55 1 1210 1423 71 5 0 chrX 82011157 82011353 -84638943 - L1Md_F2 LINE L1 -3 6579 6383 1 1210 329 262 32 84 chrX 82011635 82011789 -84638507 + IAP-d-int LTR ERVK 6377 6522 -20 1 1210 413 291 178 58 chrX 82011913 82012154 -84638142 + RLTR9A LTR ERVK 4 273 -95 1 1210 25 65 0 0 chrX 82012280 82012326 -84637970 + AT_rich Low_complexity Low_complexity 1 46 0 1 1210 326 155 244 73 chrX 82012528 82012692 -84637604 - B2_Mm2 SINE B2 -2 193 2 1 1210 1155 119 11 0 chrX 82012707 82012884 -84637412 - B2_Mm1t SINE B2 -14 179 1 1 1210 845 276 56 15 chrX 82012926 82013264 -84637032 - L1MA5 LINE L1 -375 5925 5574 2 1210 641 147 9 0 chrX 82014019 82014135 -84636161 + Lx LINE L1 6536 6652 -2 2 1210 523 347 50 4 chrX 82014683 82014923 -84635373 + MIR SINE MIR 3 253 -9 2 1210 206 137 19 38 chrX 82014984 82015037 -84635259 + A-rich Low_complexity Low_complexity 2 53 0 2 1210 25 31 0 0 chrX 82015620 82015652 -84634644 + AT_rich Low_complexity Low_complexity 1 32 0 2 1210 28 0 0 0 chrX 82015788 82015816 -84634480 + AT_rich Low_complexity Low_complexity 1 28 0 2 1210 648 97 0 0 chrX 82016580 82016673 -84633623 + (GGGGA)n Simple_repeat Simple_repeat 4 96 0 2 1210 279 0 0 0 chrX 82016673 82016704 -84633592 + (CAAGA)n Simple_repeat Simple_repeat 4 34 0 2 1210 255 133 0 0 chrX 82016729 82016774 -84633522 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 1210 225 392 31 0 chrX 82017028 82017125 -84633171 + PB1D10 SINE Alu 3 102 -15 2 1210 23 33 0 0 chrX 82018718 82018748 -84631548 + AT_rich Low_complexity Low_complexity 1 30 0 3 1210 22 0 0 0 chrX 82018825 82018847 -84631449 + AT_rich Low_complexity Low_complexity 1 22 0 3 1210 363 106 0 0 chrX 82020142 82020208 -84630088 + (A)n Simple_repeat Simple_repeat 1 66 0 3 1210 365 395 13 9 chrX 82020260 82020490 -84629806 - MIR SINE MIR -30 232 2 3 1210 249 333 0 65 chrX 82021919 82021996 -84628300 + ID4_ SINE ID 2 73 -10 3 1210 212 171 24 0 chrX 82021998 82022039 -84628257 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1210 936 287 51 4 chrX 82022347 82022602 -84627694 - B4A SINE B4 -22 270 4 3 1210 453 298 15 0 chrX 82024920 82025051 -84625245 + B1_Mur1 SINE Alu 1 133 -16 3 1210 22 35 0 0 chrX 82025572 82025601 -84624695 + AT_rich Low_complexity Low_complexity 1 29 0 3 1210 468 251 142 27 chrX 82027642 82027973 -84622323 - L1MC5 LINE L1 -63 7898 7530 3 1210 5143 214 81 15 chrX 82027979 82029078 -84621218 - Lx9 LINE L1 -16 7628 6452 4 1210 2302 174 34 5 chrX 82029078 82029487 -84620809 + MTC LTR MaLR 1 421 0 4 1210 5143 214 81 15 chrX 82029487 82029575 -84620721 - Lx9 LINE L1 -1193 6451 6363 4 1210 414 0 0 0 chrX 82029733 82029779 -84620517 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 1210 269 341 16 16 chrX 82030332 82030457 -84619839 - Lx7 LINE L1 -13 7683 7559 4 1210 477 0 0 0 chrX 82030541 82030594 -84619702 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 1210 596 14 14 0 chrX 82030594 82030666 -84619630 + (TG)n Simple_repeat Simple_repeat 1 74 0 4 1210 916 280 31 12 chrX 82030666 82030988 -84619308 - Lx7 LINE L1 -399 7297 6970 4 1210 1261 218 64 55 chrX 82032103 82032313 -84617983 - MTD LTR MaLR -8 411 197 4 1210 413 158 0 12 chrX 82032313 82032396 -84617900 - L1_Mus3 LINE L1 -6 6632 6551 4 1210 1261 218 64 55 chrX 82032396 82032496 -84617800 - MTD LTR MaLR -223 196 98 4 1210 935 206 12 12 chrX 82032480 82032647 -84617649 - B3 SINE B2 -48 168 2 4 1210 1665 186 89 0 chrX 82032662 82033000 -84617296 + RMER1B Other Other 693 1060 -6 4 1210 471 233 0 137 chrX 82033002 82033141 -84617155 - MTD LTR MaLR -301 120 1 4 1210 333 300 56 73 chrX 82035066 82035269 -84615027 - L2c LINE L2 -4 3422 3199 5 1210 235 417 29 0 chrX 82035623 82035762 -84614534 - L2 LINE L2 -698 2721 2579 5 1210 2880 61 50 3 chrX 82035904 82036282 -84614014 + MTA_Mm LTR MaLR 1 396 0 5 1210 235 242 317 0 chrX 82037094 82037214 -84613082 + L1MB1 LINE L1 6004 6161 -28 5 1210 1299 234 63 55 chrX 82037731 82038093 -84612203 - ORR1D2 LTR MaLR 0 370 6 5 1210 709 130 14 7 chrX 82038381 82038520 -84611776 + GA-rich Low_complexity Low_complexity 4 143 0 5 1210 2356 311 56 25 chrX 82039236 82040122 -84610174 - Lx8 LINE L1 -101 7372 6459 5 1210 561 328 38 15 chrX 82040134 82040400 -84609896 - L1M2 LINE L1 -1361 4782 4511 5 1210 297 324 0 110 chrX 82040402 82040520 -84609776 - PB1D10 SINE Alu -6 111 7 5 1210 804 272 95 47 chrX 82040524 82041190 -84609106 - L1M2 LINE L1 -1711 4432 3735 5 1210 208 188 14 14 chrX 82041512 82041582 -84608714 + (TA)n Simple_repeat Simple_repeat 2 71 0 5 1210 628 288 52 15 chrX 82041613 82041938 -84608358 - L1MA5 LINE L1 -371 5929 5593 6 1210 862 260 51 55 chrX 82042507 82043019 -84607277 - L1MA5 LINE L1 -703 5600 5043 6 1210 411 318 34 2 chrX 82043497 82043732 -84606564 - L1MA5 LINE L1 -1113 5030 4730 6 1210 647 322 47 3 chrX 82043735 82044078 -84606218 - L1MA5 LINE L1 -2361 3782 3425 6 1210 282 313 90 48 chrX 82044135 82044185 -84606111 - L1MA5 LINE L1 -3072 3071 3027 6 1210 423 0 0 0 chrX 82044185 82044232 -84606064 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 6 1210 282 313 90 48 chrX 82044232 82044580 -84605716 - L1MA5 LINE L1 -3117 3026 2656 6 1210 18741 96 53 5 chrX 82044618 82046704 -84603592 - L1_Mus2 LINE L1 -1 6565 4206 6 1210 261 118 0 0 chrX 82046704 82046755 -84603541 + (TA)n Simple_repeat Simple_repeat 1 51 0 6 1210 18741 118 94 4 chrX 82046755 82048470 -84601826 - L1_Mus2 LINE L1 -1678 4205 2486 6 1210 2621 46 3 3 chrX 82048494 82048824 -84601472 - L1_Mus1 LINE L1 0 6567 6238 6 1210 2790 142 19 9 chrX 82048824 82049287 -84601009 - RLTR12A LTR ERVK -100 468 1 6 1210 197 196 157 0 chrX 82049307 82049358 -84600938 + L2a LINE L2 3368 3426 0 6 1210 353 301 8 0 chrX 82050028 82050123 -84600173 + PB1D10 SINE Alu 16 110 -7 6 151 543 318 158 82 chrX 82050696 82051108 -84599188 + LTR68 LTR ERV1 1 443 -297 6 1211 314 47 45 30 chrX 82051122 82051188 -84599108 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 6 1211 298 270 464 16 chrX 82051197 82051392 -84598904 + LTR68 LTR ERV1 458 739 -1 6 1211 242 254 273 0 chrX 82051644 82051754 -84598542 - Tigger7 DNA MER2_type -12 2479 2340 7 1211 228 221 103 0 chrX 82051742 82051810 -84598486 - Tigger7 DNA MER2_type -1999 492 418 7 1211 555 307 84 0 chrX 82051823 82051989 -84598307 + B3A SINE B2 2 181 -17 7 1211 535 276 97 0 chrX 82052019 82052164 -84598132 - Tigger7 DNA MER2_type -2071 420 262 7 1211 2836 60 12 52 chrX 82052177 82052580 -84597716 - L1_Mus2 LINE L1 0 6566 6180 7 1211 228 348 76 0 chrX 82052580 82052672 -84597624 - Tigger7 DNA MER2_type -2392 99 1 7 1211 640 296 76 19 chrX 82052709 82052919 -84597377 - ID_B1 SINE B4 0 224 3 7 1211 2226 217 66 17 chrX 82052945 82053488 -84596808 - Lx9 LINE L1 -154 7490 6921 7 1211 27685 39 0 1 chrX 82053484 82058663 -84591633 + L1Md_T LINE L1 329 5589 -297 7 1211 8384 34 0 1 chrX 82058663 82059660 -84590636 + L1Md_T LINE L1 5590 6585 0 7 1211 2519 230 16 11 chrX 82059662 82060221 -84590075 - Lx9 LINE L1 -709 6935 6374 7 1211 203 265 14 29 chrX 82061067 82061137 -84589159 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 7 1211 342 0 0 0 chrX 82064033 82064071 -84586225 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1211 29 28 0 0 chrX 82064810 82064846 -84585450 + AT_rich Low_complexity Low_complexity 1 36 0 7 1211 1018 96 0 0 chrX 82065415 82065551 -84584745 - B1_Mus1 SINE Alu -10 138 3 7 1211 345 291 11 11 chrX 82065905 82065992 -84584304 - PB1 SINE Alu -14 113 27 8 1211 1177 68 0 47 chrX 82066772 82066942 -84583354 - L1_Mus1 LINE L1 -1 6566 6405 8 1211 189 0 0 0 chrX 82067211 82067232 -84583064 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 8 1211 647 284 103 30 chrX 82067232 82067435 -84582861 - B4A SINE B4 -49 243 26 8 1211 1213 271 62 19 chrX 82070567 82070936 -84579360 - Lx3C LINE L1 -40 6936 6552 8 1211 1047 175 120 17 chrX 82070935 82071168 -84579128 + Lx4B LINE L1 6306 6562 -496 8 1211 309 304 119 20 chrX 82071211 82071362 -84578934 - MER63A DNA AcHobo -5 205 40 8 1211 394 352 32 16 chrX 82071880 82072065 -84578231 - MER5A DNA MER1_type 0 189 2 8 1211 298 324 18 9 chrX 82074121 82074233 -84576063 + Lx9 LINE L1 7344 7456 -188 8 1211 432 37 0 0 chrX 82074234 82074288 -84576008 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 1211 15427 46 76 1 chrX 82076040 82078123 -84572173 + L1_Mm LINE L1 1543 3782 -2101 9 1211 7679 55 10 4 chrX 82078115 82079079 -84571217 - L1Md_F2 LINE L1 -15 6567 5598 9 1211 212 182 35 52 chrX 82079079 82079137 -84571159 - B2_Mm2 SINE B2 -138 57 1 9 1211 458 268 10 0 chrX 82080328 82080443 -84569853 + B1F SINE Alu 3 118 -31 9 1211 400 295 53 23 chrX 82080443 82080457 -84569839 + ID_B1 SINE B4 84 216 -8 9 1211 387 0 0 0 chrX 82080460 82080503 -84569793 + (TA)n Simple_repeat Simple_repeat 1 43 0 9 1211 321 323 0 70 chrX 82080513 82080656 -84569640 - RMER12 LTR ERVK -466 856 724 9 1211 195 42 0 0 chrX 82080951 82080975 -84569321 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 9 1211 7041 202 42 14 chrX 82081392 82082804 -84567492 + Lx5 LINE L1 5597 7049 -1 9 1211 1101 102 4 13 chrX 82082812 82083045 -84567251 + (GAA)n Simple_repeat Simple_repeat 1 230 0 9 1211 243 213 50 50 chrX 82083083 82083182 -84567114 + MER5A DNA MER1_type 60 158 -31 1 1211 312 291 0 0 chrX 82083338 82083424 -84566872 + BC1_Mm scRNA scRNA 10 95 -57 1 1211 333 200 302 9 chrX 82083540 82083656 -84566640 + B3 SINE B2 1 150 -66 1 1211 279 0 0 0 chrX 82083659 82083690 -84566606 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1211 384 128 0 0 chrX 82083690 82083768 -84566528 + (GA)n Simple_repeat Simple_repeat 1 78 0 1 1211 23 78 0 0 chrX 82083775 82083826 -84566470 + AT_rich Low_complexity Low_complexity 1 51 0 1 1211 879 277 64 15 chrX 82083826 82084090 -84566206 - Lx8 LINE L1 -13 7460 7184 1 1211 185 94 0 30 chrX 82084399 82084432 -84565864 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1 1211 1045 320 4 7 chrX 82084558 82084832 -84565464 + B4A SINE B4 2 274 -18 1 1211 434 273 118 17 chrX 82084980 82085140 -84565156 + B3 SINE B2 6 172 -23 1 1211 405 256 128 0 chrX 82085150 82085275 -84565021 - B1_Mur3 SINE Alu -6 143 3 1 1211 313 407 109 15 chrX 82086318 82086647 -84563649 + LTR16A1 LTR ERVL 1 360 -96 1 1211 364 382 104 16 chrX 82087266 82087700 -84562596 + L2 LINE L2 955 1426 -1993 1 1211 585 312 104 54 chrX 82087833 82088111 -84562185 + B4A SINE B4 1 292 0 1 1211 23 33 0 0 chrX 82088316 82088346 -84561950 + AT_rich Low_complexity Low_complexity 1 30 0 1 1211 24 67 0 0 chrX 82088638 82088683 -84561613 + AT_rich Low_complexity Low_complexity 1 45 0 1 1211 638 234 70 0 chrX 82088767 82088895 -84561401 - MTE2b LTR MaLR -5 374 238 1 1211 406 191 55 45 chrX 82088981 82089091 -84561205 - Lx4B LINE L1 -21 7037 6927 1 1211 327 268 25 13 chrX 82089096 82089214 -84561082 + B1F SINE Alu 23 138 -11 1 1211 26 0 0 0 chrX 82089214 82089240 -84561056 + AT_rich Low_complexity Low_complexity 1 26 0 1 1211 346 294 213 55 chrX 82089354 82089771 -84560525 - Tigger13a DNA MER2_type -1 770 288 1 1211 977 87 0 0 chrX 82089842 82089980 -84560316 - L1_Mus1 LINE L1 0 6567 6430 1 1211 1176 54 0 0 chrX 82090859 82091006 -84559290 + B1_Mus1 SINE Alu 2 148 0 1 1211 265 73 73 0 chrX 82091021 82091076 -84559220 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 1 1211 443 63 16 0 chrX 82091234 82091297 -84558999 + (TTTC)n Simple_repeat Simple_repeat 1 64 0 1 1211 1087 68 0 7 chrX 82091297 82091444 -84558852 - B1_Mm SINE Alu -1 146 1 1 1211 2086 80 7 0 chrX 82091466 82091753 -84558543 + L1_Mus3 LINE L1 6350 6638 0 1 1211 719 257 0 7 chrX 82091762 82091911 -84558385 + B1_Mur1 SINE Alu 2 149 0 1 1211 328 275 0 28 chrX 82091930 82092001 -84558295 + PB1D7 SINE Alu 48 116 -4 1 1211 200 411 30 30 chrX 82092898 82093066 -84557230 + MIR SINE MIR 5 172 -90 1 1211 760 313 9 22 chrX 82093164 82093396 -84556900 - MLT1A0 LTR MaLR -4 361 133 1 1211 1630 191 73 34 chrX 82093397 82093755 -84556541 - ORR1D1 LTR MaLR -2 372 1 1 1211 569 279 7 22 chrX 82094228 82094367 -84555929 + B1_Mur2 SINE Alu 4 140 -9 1 1211 257 315 56 111 chrX 82094645 82094772 -84555524 + MIR SINE MIR 31 143 -125 1 1211 4071 4 0 0 chrX 82094772 82095226 -84555070 - L1Md_A LINE L1 0 6582 6129 1 1211 257 314 56 111 chrX 82095226 82095343 -84554953 + MIR SINE MIR 137 262 -6 1 1211 1008 100 0 6 chrX 82095498 82095659 -84554637 - Lx2 LINE L1 0 6997 6838 1 1211 5859 11 0 6 chrX 82096400 82097088 -84553208 - L1Md_T LINE L1 0 6582 5923 1 1211 9096 11 0 0 chrX 82097088 82098184 -84552112 + L1Md_T LINE L1 4840 5935 -647 1 1211 2499 94 5 56 chrX 82098768 82099161 -84551135 - L1_Mus1 LINE L1 -1 6566 6194 1 1211 233 277 28 112 chrX 82099172 82099329 -84550967 - MIR SINE MIR -4 264 112 1 1211 404 0 0 0 chrX 82099611 82099659 -84550637 - L1Md_T LINE L1 -624 5958 5911 1 1211 5771 8 0 0 chrX 82099659 82100301 -84549995 + L1Md_T LINE L1 5941 6582 0 1 1211 22 0 0 0 chrX 82100314 82100336 -84549960 + AT_rich Low_complexity Low_complexity 1 22 0 1 1211 22 0 0 0 chrX 82100680 82100702 -84549594 + AT_rich Low_complexity Low_complexity 1 22 0 1 1211 459 210 0 0 chrX 82100999 82101099 -84549197 + (TA)n Simple_repeat Simple_repeat 1 100 0 1 1211 304 333 74 70 chrX 82101251 82101464 -84548832 + B4 SINE B4 3 203 -89 1 1211 494 31 16 0 chrX 82101464 82101528 -84548768 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 1211 304 333 74 70 chrX 82101528 82101585 -84548711 + B4 SINE B4 204 273 -19 1 1211 433 298 93 6 chrX 82102115 82102259 -84548037 - MER5A DNA MER1_type -2 187 43 1 1211 389 20 20 0 chrX 82102259 82102309 -84547987 + (TTG)n Simple_repeat Simple_repeat 2 52 0 1 1211 433 298 93 6 chrX 82102309 82102336 -84547960 - MER5A DNA MER1_type -147 42 2 1 1211 304 275 99 45 chrX 82102662 82102883 -84547413 + MER33 DNA MER1_type 30 262 -62 1 1211 345 233 12 0 chrX 82102947 82103033 -84547263 + MER33 DNA MER1_type 238 324 0 1 1211 1429 198 121 12 chrX 82103541 82103873 -84546423 + ORR1D2 LTR MaLR 1 368 -2 1 1211 189 107 0 0 chrX 82104758 82104786 -84545510 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1211 286 389 0 8 chrX 82106304 82106436 -84543860 - MIR SINE MIR -16 246 116 1 1211 247 311 0 0 chrX 82106599 82106660 -84543636 + ID4_ SINE ID 3 63 -20 1 1211 270 288 123 43 chrX 82107591 82107729 -84542567 + RSINE1 SINE B4 17 165 0 1 1211 194 0 39 0 chrX 82108458 82108484 -84541812 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 1 1211 773 280 23 107 chrX 82108714 82108769 -84541527 - RMER15 LTR ERVL 0 575 532 1 1211 290 26 26 0 chrX 82108769 82108808 -84541488 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1211 681 76 0 0 chrX 82108809 82108901 -84541395 + (GA)n Simple_repeat Simple_repeat 1 92 0 1 1211 773 280 23 107 chrX 82108901 82109151 -84541145 - RMER15 LTR ERVL -44 531 294 1 1211 242 270 0 0 chrX 82109348 82109411 -84540885 - L1MEc LINE L1 -979 5638 5576 1 1211 654 269 46 37 chrX 82109409 82109823 -84540473 - L1MEc LINE L1 -3804 2515 2096 1 1211 554 247 19 0 chrX 82109871 82110025 -84540271 - L1MEc LINE L1 -4248 2152 1996 1 1211 315 309 94 33 chrX 82110036 82110217 -84540079 - L1MEc LINE L1 -5712 688 497 1 1211 263 140 20 0 chrX 82110277 82110327 -84539969 + CT-rich Low_complexity Low_complexity 1 51 0 1 1211 2317 179 21 12 chrX 82110356 82110781 -84539515 - Lx5 LINE L1 0 7050 6622 1 1211 1046 274 24 51 chrX 82111605 82111901 -84538395 + B4A SINE B4 5 292 0 1 1211 236 369 23 0 chrX 82112233 82112363 -84537933 + MIRc SINE MIR 134 266 -2 1 1211 4428 188 28 10 chrX 82113270 82114098 -84536198 - Lx5 LINE L1 -159 6891 6049 1 1211 273 225 176 59 chrX 82114107 82114192 -84536104 + PB1D10 SINE Alu 13 107 -20 1 1211 304 231 90 27 chrX 82114484 82114595 -84535701 - Ricksha_c DNA MuDR -1583 465 348 1 1211 697 0 0 0 chrX 82114883 82114969 -84535327 + L1Md_A LINE L1 6497 6582 0 1 1211 280 337 29 19 chrX 82115137 82115240 -84535056 + MLT1L LTR MaLR 417 520 -90 1 1211 358 232 14 0 chrX 82115355 82115424 -84534872 + URR1B DNA MER1_type 35 104 -121 1 1211 7971 64 4 0 chrX 82115461 82116601 -84533695 - L1_Mus1 LINE L1 0 6567 5415 1 1211 726 153 58 7 chrX 82116601 82116739 -84533557 + URR1B DNA MER1_type 81 225 0 1 1211 261 285 134 81 chrX 82116982 82117154 -84533142 - MTEa LTR MaLR 0 379 199 1 1211 233 246 0 0 chrX 82117681 82117738 -84532558 + PB1D9 SINE Alu 64 120 0 1 1211 201 192 58 0 chrX 82118136 82118188 -84532108 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1 1211 236 85 0 41 chrX 82118331 82118380 -84531916 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 1 1211 24 53 0 0 chrX 82118962 82119000 -84531296 + AT_rich Low_complexity Low_complexity 1 38 0 1 1211 5737 149 54 8 chrX 82119000 82120011 -84530285 - Lx4A LINE L1 0 7058 6001 1 1211 3616 5 0 0 chrX 82120015 82120418 -84529878 - L1Md_A LINE L1 0 6582 6180 1 1211 416 303 80 0 chrX 82120511 82120686 -84529610 - MER5A DNA MER1_type 0 189 1 1 1211 2677 56 3 0 chrX 82120854 82121193 -84529103 - L1_Mus1 LINE L1 0 6567 6228 1 1211 312 250 11 11 chrX 82121280 82121369 -84528927 + CT-rich Low_complexity Low_complexity 2 90 0 1 1211 207 262 25 12 chrX 82122918 82122999 -84527297 + A-rich Low_complexity Low_complexity 3 84 0 1 1211 654 87 0 0 chrX 82123113 82123216 -84527080 + (TG)n Simple_repeat Simple_repeat 2 104 0 1 1211 224 353 90 25 chrX 82124705 82124827 -84525469 - L2b LINE L2 -20 3355 3226 1 1211 3354 35 0 7 chrX 82126065 82126472 -84523824 - L1Md_F2 LINE L1 0 6582 6179 1 1211 829 248 80 0 chrX 82126993 82127219 -84523077 - L1MA4 LINE L1 -364 5936 5693 1 1211 210 361 69 62 chrX 82127225 82127278 -84523018 - ID_B1 SINE B4 -16 208 82 1 1211 245 347 0 14 chrX 82127278 82127351 -84522945 - PB1D10 SINE Alu -45 72 1 1 1211 368 236 0 0 chrX 82128245 82128317 -84521979 - ID4 SINE ID -7 76 5 1 1211 2379 72 202 0 chrX 82129554 82129930 -84520366 - Lx3_Mus LINE L1 -15 6994 6543 1 1211 413 296 61 104 chrX 82129931 82130210 -84520086 + ORR1E LTR MaLR 88 354 -5 1 1211 739 288 146 41 chrX 82130309 82130624 -84519672 + MLT1A0 LTR MaLR 6 353 -12 1 1211 916 315 99 40 chrX 82131527 82132050 -84518246 - LTR82A LTR ERVL -318 554 1 1 1211 309 284 93 36 chrX 82132193 82132332 -84517964 + MER5B DNA MER1_type 32 178 0 1 1211 226 403 14 7 chrX 82133837 82133977 -84516319 + L3 LINE CR1 3329 3469 -1020 1 1211 511 263 56 49 chrX 82134274 82134377 -84515919 + B3 SINE B2 70 171 -45 1 1211 558 43 0 0 chrX 82134377 82134446 -84515850 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 1211 189 0 0 0 chrX 82134446 82134466 -84515830 + (GA)n Simple_repeat Simple_repeat 1 21 0 1 1211 511 263 56 49 chrX 82134466 82134505 -84515791 + B3 SINE B2 172 213 -3 1 1211 440 360 78 62 chrX 82134544 82134944 -84515352 + L3 LINE CR1 3765 4170 -319 1 1211 257 350 47 67 chrX 82135145 82135338 -84514958 - MLT1J LTR MaLR -100 412 224 1 1211 243 114 0 0 chrX 82135659 82135703 -84514593 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1211 668 341 18 22 chrX 82136289 82136511 -84513785 + B4A SINE B4 1 221 -71 1 1211 412 315 27 9 chrX 82136529 82136641 -84513655 + RSINE1 SINE B4 29 142 -23 1 1211 1427 67 11 0 chrX 82136691 82136870 -84513426 + B2_Mm2 SINE B2 1 181 -14 2 1211 198 208 0 0 chrX 82136984 82137032 -84513264 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1211 194 109 0 42 chrX 82137035 82137083 -84513213 + (CAGAGA)n Simple_repeat Simple_repeat 3 48 0 2 1211 342 318 18 53 chrX 82137493 82137606 -84512690 - PB1D10 SINE Alu -8 109 1 2 1211 413 195 11 65 chrX 82137608 82137701 -84512595 + MTC LTR MaLR 334 421 0 2 1211 1627 276 17 6 chrX 82138738 82139095 -84511201 + MTEa LTR MaLR 16 376 -3 2 1211 208 247 39 88 chrX 82139951 82140053 -84510243 + MIR SINE MIR 60 156 -106 2 1211 294 95 0 0 chrX 82140719 82140761 -84509535 + (TCC)n Simple_repeat Simple_repeat 2 43 0 2 1211 6480 101 46 5 chrX 82141008 82141991 -84508305 - Lx3B LINE L1 -10 6963 5941 2 1211 960 111 0 0 chrX 82141991 82142135 -84508161 + (TCCCC)n Simple_repeat Simple_repeat 3 146 0 2 1211 872 190 71 16 chrX 82142135 82142317 -84507979 - B2_Mm2 SINE B2 0 195 4 2 1211 2172 254 88 11 chrX 82142485 82143007 -84507289 - Lx5 LINE L1 -3 7047 6486 2 1211 928 253 0 5 chrX 82143005 82143192 -84507104 - Lx5 LINE L1 -693 6357 6172 2 1211 2433 196 46 13 chrX 82143188 82143709 -84506587 + Lx5 LINE L1 5590 6127 -923 2 1211 660 278 48 0 chrX 82143742 82143929 -84506367 - B3A SINE B2 0 198 3 2 1211 369 0 0 0 chrX 82145896 82145937 -84504359 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1211 702 60 0 0 chrX 82146402 82146502 -84503794 + (TTGG)n Simple_repeat Simple_repeat 1 100 0 2 1211 273 55 35 35 chrX 82146513 82146570 -84503726 + (GTTTG)n Simple_repeat Simple_repeat 2 58 0 2 1211 267 301 88 29 chrX 82147012 82147149 -84503147 + MIRb SINE MIR 118 262 -6 2 1211 380 72 0 18 chrX 82147276 82147333 -84502963 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1211 627 261 14 40 chrX 82147514 82147662 -84502634 + RSINE1 SINE B4 3 146 -19 2 1211 453 36 0 0 chrX 82147676 82147731 -84502565 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1211 381 232 71 0 chrX 82148997 82149096 -84501200 - PB1D10 SINE Alu 0 117 12 2 1211 4922 43 0 18 chrX 82149682 82150300 -84499996 - L1Md_F2 LINE L1 0 6582 5976 2 1211 237 354 0 58 chrX 82150383 82150470 -84499826 + RSINE1 SINE B4 84 165 0 2 1211 4507 59 1 0 chrX 82150673 82151253 -84499043 - Lx7 LINE L1 -1869 5827 5244 2 1211 254 50 25 0 chrX 82151624 82151664 -84498632 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1211 864 114 0 120 chrX 82151960 82152160 -84498136 - L1Md_F2 LINE L1 0 6582 6407 2 1211 250 216 0 0 chrX 82152559 82152610 -84497686 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1211 484 289 34 27 chrX 82152641 82152787 -84497509 + B1_Mur1 SINE Alu 2 148 -1 2 1211 29 70 0 0 chrX 82152827 82152884 -84497412 + AT_rich Low_complexity Low_complexity 1 57 0 2 1211 203 133 0 0 chrX 82153018 82153048 -84497248 + (CTTG)n Simple_repeat Simple_repeat 1 30 0 2 1211 250 321 172 6 chrX 82153063 82153220 -84497076 - L2 LINE L2 -900 2519 2337 2 1211 586 295 0 8 chrX 82153520 82153650 -84496646 + RSINE1 SINE B4 4 132 -33 2 1211 691 140 8 8 chrX 82153660 82153790 -84496506 + GA-rich Low_complexity Low_complexity 4 133 0 2 1211 381 318 7 72 chrX 82154121 82154260 -84496036 + ID_B1 SINE B4 94 223 -1 2 1211 965 269 103 39 chrX 82154816 82155377 -84494919 - L1MC4a LINE L1 0 7882 7286 2 1211 740 214 0 0 chrX 82155580 82155720 -84494576 - B1_Mur3 SINE Alu -9 140 1 2 1211 261 0 0 0 chrX 82155824 82155853 -84494443 + (CTCA)n Simple_repeat Simple_repeat 3 31 0 2 1211 182 292 20 20 chrX 82155911 82155960 -84494336 - L2a LINE L2 -93 3333 3285 2 1211 4032 138 2 3 chrX 82156146 82156778 -84493518 + Lx2 LINE L1 6366 6996 -1 2 1211 726 283 32 5 chrX 82156805 82156993 -84493303 + B3 SINE B2 1 193 -23 2 1211 257 75 25 0 chrX 82157373 82157413 -84492883 + (TATG)n Simple_repeat Simple_repeat 2 42 0 2 1211 680 234 0 0 chrX 82158783 82158924 -84491372 + B1F1 SINE Alu 2 142 -7 2 1211 557 297 100 5 chrX 82159167 82159387 -84490909 - MIR SINE MIR -21 241 1 2 1211 880 328 45 34 chrX 82159463 82159728 -84490568 + B4A SINE B4 2 269 -23 2 1211 369 0 0 0 chrX 82159728 82159769 -84490527 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1211 267 378 47 25 chrX 82159954 82160190 -84490106 - L3 LINE CR1 -117 4372 4132 2 1211 23 0 0 0 chrX 82160285 82160308 -84489988 + AT_rich Low_complexity Low_complexity 1 23 0 2 1211 513 0 0 0 chrX 82160984 82161041 -84489255 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1211 826 285 42 3 chrX 82161566 82161872 -84488424 - L1MB2 LINE L1 -7 6164 5847 2 1211 299 396 80 30 chrX 82162064 82162327 -84487969 - LTR16A LTR ERVL -115 336 61 2 1211 252 301 87 12 chrX 82162919 82163014 -84487282 + B1F SINE Alu 2 102 -47 2 1211 672 275 145 6 chrX 82163044 82163223 -84487073 + ID_B1 SINE B4 6 209 -15 2 1211 354 264 74 19 chrX 82163318 82163426 -84486870 + MER2 DNA MER2_type 207 320 -25 2 1211 215 339 85 33 chrX 82163468 82163656 -84486640 - MIRb SINE MIR -38 230 34 2 1211 414 340 128 0 chrX 82164013 82164169 -84486127 - ID_B1 SINE B4 -19 205 30 2 1211 1072 292 73 2 chrX 82164390 82164816 -84485480 - L1MD1 LINE L1 -2 6240 5785 2 1211 693 299 91 31 chrX 82165005 82165742 -84484554 - L1MD1 LINE L1 -553 5689 4902 2 1211 392 311 8 15 chrX 82167086 82167220 -84483076 + MIR SINE MIR 130 262 0 2 1211 476 227 71 18 chrX 82168271 82168383 -84481913 + RSINE1 SINE B4 8 125 -40 2 1211 450 53 0 0 chrX 82168383 82168440 -84481856 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 1211 288 312 70 18 chrX 82168467 82168581 -84481715 + PB1 SINE Alu 1 120 -7 2 1211 240 204 36 36 chrX 82168937 82168993 -84481303 - B1_Mur2 SINE Alu -28 121 66 2 1211 532 271 8 48 chrX 82168960 82169084 -84481212 - ID_B1 SINE B4 -19 205 87 2 1211 1624 216 35 14 chrX 82169659 82170025 -84480271 - ORR1D1 LTR MaLR 0 374 1 2 1211 450 316 82 26 chrX 82170391 82170586 -84479710 - B4A SINE B4 -78 214 9 2 1211 345 100 0 0 chrX 82170671 82170721 -84479575 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1211 547 270 156 5 chrX 82170862 82171048 -84479248 + MER20 DNA MER1_type 2 215 -4 2 1211 357 24 0 0 chrX 82171628 82171670 -84478626 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 2 1211 612 309 0 7 chrX 82172104 82172257 -84478039 + B3A SINE B2 1 152 -46 2 1211 426 65 0 0 chrX 82172258 82172320 -84477976 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 1211 609 267 0 0 chrX 82172794 82172929 -84477367 - B1F SINE Alu -8 141 7 2 1211 28 61 0 0 chrX 82173630 82173679 -84476617 + AT_rich Low_complexity Low_complexity 1 49 0 2 1211 2281 61 0 10 chrX 82173748 82174047 -84476249 - L1Md_F2 LINE L1 0 6582 6287 2 1211 2293 47 0 0 chrX 82174047 82174325 -84475971 + L1Md_F2 LINE L1 6031 6308 -274 2 1211 281 241 0 0 chrX 82174785 82174843 -84475453 - L2a LINE L2 -31 3395 3338 2 1211 184 289 124 62 chrX 82174998 82175127 -84475169 - MIRc SINE MIR -116 152 16 2 1211 512 265 45 38 chrX 82175265 82175422 -84474874 + RSINE1 SINE B4 2 159 -6 2 1211 27 49 0 0 chrX 82175422 82175463 -84474833 + AT_rich Low_complexity Low_complexity 1 41 0 2 1211 204 40 0 0 chrX 82176704 82176729 -84473567 + (CCA)n Simple_repeat Simple_repeat 1 25 0 2 1211 206 81 0 26 chrX 82177009 82177047 -84473249 + (TTTTTG)n Simple_repeat Simple_repeat 5 41 0 2 1211 21 0 0 0 chrX 82177338 82177359 -84472937 + AT_rich Low_complexity Low_complexity 1 21 0 2 1211 620 326 34 121 chrX 82178907 82179082 -84471214 + B3A SINE B2 1 172 -26 2 1211 321 89 0 0 chrX 82179082 82179127 -84471169 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1211 300 326 34 121 chrX 82179127 82179157 -84471139 + B2_Mm1t SINE B2 163 187 -6 2 1211 946 153 6 6 chrX 82179318 82179496 -84470800 + GA-rich Low_complexity Low_complexity 3 180 0 2 1211 216 0 0 0 chrX 82179496 82179520 -84470776 + (GAAA)n Simple_repeat Simple_repeat 4 27 0 2 1211 393 58 0 0 chrX 82179520 82179572 -84470724 + (GGGGA)n Simple_repeat Simple_repeat 5 56 0 2 1211 865 257 0 5 chrX 82180001 82180212 -84470084 + B3 SINE B2 2 211 -5 2 1211 255 161 32 11 chrX 82180614 82180708 -84469588 + (TTTG)n Simple_repeat Simple_repeat 1 96 0 2 1211 1080 44 0 0 chrX 82180708 82180844 -84469452 - B1_Mus1 SINE Alu 0 148 13 2 1211 391 228 112 94 chrX 82180743 82180903 -84469393 - MT2B LTR ERVL -337 264 102 2 1211 783 206 7 7 chrX 82180986 82181133 -84469163 + B1_Mur3 SINE Alu 2 148 -1 2 1211 784 270 55 0 chrX 82181204 82181404 -84468892 - B3 SINE B2 -5 211 1 2 1211 433 323 50 25 chrX 82181441 82181600 -84468696 - RSINE1 SINE B4 0 165 3 2 1211 183 80 0 0 chrX 82181962 82181987 -84468309 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 2 1212 191 301 206 0 chrX 82182610 82182683 -84467613 - L2b LINE L2 0 3375 3288 2 1212 207 0 0 0 chrX 82182751 82182774 -84467522 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1212 237 372 26 0 chrX 82182781 82182859 -84467437 + ID4_ SINE ID 2 81 -2 2 1212 235 152 51 0 chrX 82183159 82183218 -84467078 + GA-rich Low_complexity Low_complexity 4 65 0 2 1212 297 247 0 55 chrX 82183995 82184081 -84466215 + ID2 SINE ID 13 94 -58 2 1212 239 67 0 0 chrX 82184125 82184155 -84466141 + U2 snRNA snRNA 2 31 -157 2 1212 21 0 0 0 chrX 82184180 82184201 -84466095 + AT_rich Low_complexity Low_complexity 1 21 0 2 1212 411 251 41 160 chrX 82184267 82184335 -84465961 + Lx7 LINE L1 6942 7014 -682 2 1212 1119 48 0 14 chrX 82184335 82184483 -84465813 + B1_Mus2 SINE Alu 2 147 0 3 1212 411 251 41 160 chrX 82184483 82184608 -84465688 + Lx7 LINE L1 7015 7112 -584 2 1212 25 0 0 0 chrX 82185660 82185685 -84464611 + AT_rich Low_complexity Low_complexity 1 25 0 3 1212 226 284 198 59 chrX 82186266 82186420 -84463876 + MIR SINE MIR 95 259 -3 3 1212 372 356 109 26 chrX 82186620 82187064 -84463232 - MLT2B1 LTR ERVL -22 545 1 3 1212 283 89 0 35 chrX 82187116 82187174 -84463122 + (TC)n Simple_repeat Simple_repeat 1 56 0 3 1212 222 231 0 0 chrX 82188255 82188320 -84461976 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 1212 832 315 34 41 chrX 82188323 82188531 -84461765 - B4 SINE B4 -2 290 73 3 1212 1136 150 91 5 chrX 82188531 82188739 -84461557 + URR1A DNA MER1_type 1 226 0 3 1212 832 315 34 41 chrX 82188739 82188821 -84461475 - B4 SINE B4 -220 72 2 3 1212 347 328 8 41 chrX 82188870 82188991 -84461305 - PB1D10 SINE Alu 0 117 1 3 1212 234 291 26 90 chrX 82189869 82189934 -84460362 - BC1_Mm scRNA scRNA -5 147 84 3 1212 365 109 76 38 chrX 82189934 82190039 -84460257 - L1Md_F2 LINE L1 0 6582 6474 3 1212 241 274 7 70 chrX 82190039 82190128 -84460168 - ID4 SINE ID -69 83 3 3 1212 467 310 0 0 chrX 82190128 82190244 -84460052 - PB1D10 SINE Alu -1 116 1 3 1212 21 36 0 0 chrX 82190398 82190426 -84459870 + AT_rich Low_complexity Low_complexity 1 28 0 3 1212 1278 78 0 0 chrX 82190579 82190759 -84459537 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 3 1212 303 28 0 0 chrX 82190769 82190805 -84459491 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1212 369 276 8 25 chrX 82191752 82191871 -84458425 - BC1_Mm scRNA scRNA -35 117 1 3 1212 413 268 17 51 chrX 82191920 82192038 -84458258 + B1F2 SINE Alu 31 144 -5 3 1212 22 56 0 0 chrX 82192477 82192513 -84457783 + AT_rich Low_complexity Low_complexity 1 36 0 3 1212 573 15 0 0 chrX 82192629 82192695 -84457601 + (TC)n Simple_repeat Simple_repeat 2 67 0 3 1212 407 307 97 9 chrX 82193774 82193991 -84456305 + MER112 DNA MER1_type 8 243 -18 3 1212 695 58 0 0 chrX 82194071 82194175 -84456121 + L1Md_F2 LINE L1 6467 6570 -12 3 1212 2780 49 3 47 chrX 82194232 82194615 -84455681 - L1Md_F2 LINE L1 -2 6580 6215 3 1212 225 300 14 0 chrX 82195111 82195181 -84455115 + MIR SINE MIR 171 241 -21 3 1212 504 0 0 0 chrX 82196141 82196197 -84454099 + (TC)n Simple_repeat Simple_repeat 2 57 0 3 1212 555 258 76 0 chrX 82196343 82196475 -84453821 + B1_Mur1 SINE Alu 1 142 -7 3 1212 300 324 18 18 chrX 82197240 82197353 -84452943 + MER81 DNA AcHobo 2 114 0 3 1212 340 371 67 46 chrX 82197366 82197561 -84452735 - LTR16A1 LTR ERVL -14 442 244 3 1212 1170 277 92 11 chrX 82197663 82198010 -84452286 - MTE2b LTR MaLR -4 375 1 3 1212 481 72 0 0 chrX 82199275 82199344 -84450952 - B1_Mus2 SINE Alu 0 147 79 3 1212 553 189 17 75 chrX 82199346 82199466 -84450830 - B1_Mur2 SINE Alu -28 121 9 3 1212 2206 122 19 0 chrX 82199610 82199931 -84450365 - ORR1A2 LTR MaLR 0 327 1 3 1212 571 335 74 11 chrX 82199980 82200170 -84450126 - MER20 DNA MER1_type -14 205 4 3 1212 436 307 71 0 chrX 82200198 82200325 -84449971 - B1F1 SINE Alu -4 145 10 3 1212 613 97 10 10 chrX 82201090 82201194 -84449102 + (TG)n Simple_repeat Simple_repeat 1 104 0 3 1212 281 301 97 8 chrX 82201377 82201511 -84448785 - L2a LINE L2 -6 3420 3275 3 1212 273 218 316 0 chrX 82201574 82201734 -84448562 - Lx9 LINE L1 0 7644 7435 3 1212 1747 204 18 68 chrX 82201888 82202288 -84448008 - ORR1C2 LTR MaLR -4 380 1 3 1212 375 356 67 6 chrX 82202310 82202474 -84447822 - L2a LINE L2 -342 3084 2911 3 1212 511 262 133 91 chrX 82202766 82202976 -84447320 + ID_B1 SINE B4 6 224 0 3 1212 819 247 34 34 chrX 82203823 82204028 -84446268 + B3 SINE B2 1 205 -11 3 1212 529 181 65 28 chrX 82204089 82204197 -84446099 + PB1D9 SINE Alu 1 112 -8 3 1212 285 51 0 0 chrX 82204545 82204584 -84445712 + (A)n Simple_repeat Simple_repeat 1 39 0 3 1212 213 139 28 0 chrX 82204704 82204740 -84445556 + A-rich Low_complexity Low_complexity 3 39 0 3 1212 299 324 35 14 chrX 82207619 82207760 -84442536 - L1MB1 LINE L1 -98 6091 5948 3 1212 402 318 0 18 chrX 82207938 82208047 -84442249 - PB1D10 SINE Alu -6 111 5 3 1212 297 0 0 0 chrX 82208062 82208095 -84442201 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1212 1648 239 76 18 chrX 82208096 82208476 -84441820 + MTD LTR MaLR 18 419 0 3 1212 408 310 27 5 chrX 82208950 82209135 -84441161 + L1MB1 LINE L1 5921 6109 -80 3 1212 655 261 32 6 chrX 82209340 82209498 -84440798 + B3 SINE B2 2 163 -53 3 1212 438 65 0 0 chrX 82209500 82209562 -84440734 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 1212 227 186 0 0 chrX 82209562 82209605 -84440691 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1212 184 355 21 43 chrX 82209962 82210056 -84440240 - L2c LINE L2 -42 3345 3254 3 1212 2318 165 34 2 chrX 82210208 82210616 -84439680 - MTC LTR MaLR 0 421 1 3 1212 264 308 73 28 chrX 82210616 82210793 -84439503 + L1M5 LINE L1 5608 5792 -332 3 1212 337 251 50 3 chrX 82210837 82210942 -84439354 + PB1D7 SINE Alu 1 115 -5 3 1212 375 285 65 31 chrX 82210974 82211227 -84439069 + L1MD3 LINE L1 5643 5911 -268 3 1212 201 74 0 0 chrX 82211240 82211267 -84439029 + (TTG)n Simple_repeat Simple_repeat 2 28 0 3 1212 505 292 7 42 chrX 82211352 82211495 -84438801 - MER44D DNA MER2_type -558 147 10 3 1212 405 0 0 0 chrX 82211652 82211697 -84438599 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 3 1212 27 29 0 0 chrX 82211716 82211750 -84438546 + AT_rich Low_complexity Low_complexity 1 34 0 3 1212 904 246 10 5 chrX 82211906 82212102 -84438194 - Lx8 LINE L1 -155 7318 7122 3 1212 447 35 0 0 chrX 82212103 82212160 -84438136 + (TTTTG)n Simple_repeat Simple_repeat 2 58 0 3 1212 2223 133 1089 5 chrX 82212160 82212239 -84438057 - RMER1A Other Other -164 866 860 3 1212 648 64 0 0 chrX 82212239 82212333 -84437963 + (GA)n Simple_repeat Simple_repeat 1 94 0 3 1212 2223 112 0 35 chrX 82212333 82212664 -84437632 - RMER1A Other Other -171 859 536 3 1212 2027 251 22 7 chrX 82212660 82213106 -84437190 - RMER1B Other Other -611 455 3 3 1212 6206 92 52 3 chrX 82213178 82214117 -84436179 - Lx3A LINE L1 -1 6980 5996 3 1212 354 241 45 27 chrX 82214150 82214261 -84436035 - Lx8 LINE L1 -615 6858 6746 3 1212 969 242 131 112 chrX 82214324 82214621 -84435675 - ORR1D1 LTR MaLR 0 374 71 3 1212 3314 65 0 0 chrX 82214621 82215035 -84435261 - L1_Mus2 LINE L1 0 6566 6153 3 1212 969 242 131 112 chrX 82215035 82215104 -84435192 - ORR1D1 LTR MaLR -304 70 1 3 1212 486 303 23 8 chrX 82215104 82215237 -84435059 - Lx8 LINE L1 -754 6719 6585 3 1212 202 305 91 25 chrX 82215329 82215450 -84434846 + MIRb SINE MIR 73 201 -67 3 1212 244 316 37 37 chrX 82215858 82215940 -84434356 - ID4 SINE ID -1 82 1 3 1212 486 0 0 0 chrX 82216676 82216730 -84433566 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 1212 612 274 144 0 chrX 82217339 82217485 -84432811 + B3 SINE B2 1 167 -49 3 1212 252 0 0 0 chrX 82218028 82218056 -84432240 + (T)n Simple_repeat Simple_repeat 1 28 0 3 1212 313 357 0 30 chrX 82219222 82219323 -84430973 + PB1D10 SINE Alu 10 107 -10 3 1212 207 194 0 0 chrX 82220002 82220038 -84430258 + T-rich Low_complexity Low_complexity 2 37 0 3 1212 857 202 6 17 chrX 82221639 82221815 -84428481 + URR1A DNA MER1_type 53 226 0 3 1212 372 362 24 6 chrX 82222012 82222176 -84428120 + MIR3 SINE MIR 31 197 -11 3 1212 888 297 227 24 chrX 82222895 82223361 -84426935 - Lx8 LINE L1 0 7473 6914 3 1212 410 373 69 30 chrX 82223540 82223974 -84426322 - Lx8 LINE L1 -1 7472 7022 3 1212 255 31 0 0 chrX 82225805 82225837 -84424459 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1212 5756 44 1 0 chrX 82226868 82227567 -84422729 + L1Md_F2 LINE L1 5869 6568 -14 3 1212 22 0 0 0 chrX 82227904 82227926 -84422370 + AT_rich Low_complexity Low_complexity 1 22 0 3 1212 214 245 57 0 chrX 82228524 82228577 -84421719 - BC1_Mm scRNA scRNA -89 63 8 3 1212 217 317 48 38 chrX 82229012 82229117 -84421179 + MIRb SINE MIR 53 158 -110 3 1212 270 358 62 33 chrX 82229144 82229384 -84420912 + Lx8 LINE L1 7173 7419 -54 3 1212 27 29 0 0 chrX 82229807 82229841 -84420455 + AT_rich Low_complexity Low_complexity 1 34 0 3 1212 342 0 0 0 chrX 82231828 82231866 -84418430 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1212 746 306 98 12 chrX 82231906 82232151 -84418145 - B4A SINE B4 -23 269 4 3 1212 585 333 42 55 chrX 82232510 82232842 -84417454 + LTR80B LTR ERVL 1 343 -241 3 1212 259 171 15 0 chrX 82233023 82233101 -84417195 + L1_Mus1 LINE L1 6510 6653 -1 3 1212 480 300 50 0 chrX 82233658 82233798 -84416498 - B1_Mur2 SINE Alu -2 147 1 3 1212 377 310 37 31 chrX 82233820 82233969 -84416327 + RSINE1 SINE B4 2 151 -14 3 1212 315 122 0 0 chrX 82233969 82234018 -84416278 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1212 377 310 37 31 chrX 82234018 82234031 -84416265 + RSINE1 SINE B4 152 164 -1 3 1212 21 36 0 0 chrX 82234031 82234059 -84416237 + AT_rich Low_complexity Low_complexity 1 28 0 3 1212 6596 41 4 0 chrX 82234065 82234872 -84415424 + L1Md_F2 LINE L1 5761 6570 -12 3 1212 3824 82 14 0 chrX 82234872 82235381 -84414915 - Lx3_Mus LINE L1 -279 6730 6215 3 1212 33 0 0 0 chrX 82235427 82235460 -84414836 + AT_rich Low_complexity Low_complexity 1 33 0 3 1212 26 30 0 0 chrX 82235532 82235565 -84414731 + AT_rich Low_complexity Low_complexity 1 33 0 3 1212 837 226 28 46 chrX 82235749 82235967 -84414329 + B3 SINE B2 3 216 0 3 1212 28 0 0 0 chrX 82237029 82237057 -84413239 + AT_rich Low_complexity Low_complexity 1 28 0 3 1212 701 242 0 26 chrX 82237206 82237359 -84412937 + B1_Mur2 SINE Alu 1 149 0 3 1212 1624 74 5 0 chrX 82238026 82238242 -84412054 - L1_Mus1 LINE L1 -3 6564 6348 4 1212 1685 25 0 0 chrX 82238242 82238438 -84411858 + L1Md_F2 LINE L1 6130 6325 -257 4 1212 231 297 140 56 chrX 82238716 82238823 -84411473 + L2 LINE L2 2639 2754 -665 4 1212 1661 274 70 13 chrX 82239537 82240221 -84410075 + L1MB4 LINE L1 5432 6154 -26 4 1212 478 266 0 9 chrX 82240236 82240350 -84409946 + PB1D10 SINE Alu 5 117 0 4 1212 315 240 0 30 chrX 82240358 82240457 -84409839 + L1VL2 LINE L1 98 193 -6142 4 1212 2903 161 15 71 chrX 82240456 82241587 -84408709 + L1Md_F LINE L1 453 1543 -2274 4 1212 11197 110 31 17 chrX 82241569 82241613 -84408683 + L1_Mus2 LINE L1 4122 4164 -1719 4 1212 1106 82 0 33 chrX 82241613 82241750 -84408546 + B1_Mus2 SINE Alu 1 137 -10 4 1212 222 37 0 0 chrX 82241750 82241777 -84408519 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1212 1106 82 0 33 chrX 82241777 82241791 -84408505 + B1_Mus2 SINE Alu 138 147 0 4 1212 11197 99 21 10 chrX 82241791 82244159 -84406137 + L1_Mus2 LINE L1 4165 6566 0 4 1212 245 226 19 0 chrX 82244180 82244233 -84406063 + GA-rich Low_complexity Low_complexity 3 56 0 4 1212 21 0 0 0 chrX 82245220 82245241 -84405055 + AT_rich Low_complexity Low_complexity 1 21 0 4 1212 315 49 0 0 chrX 82245241 82245282 -84405014 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1212 486 33 0 0 chrX 82245282 82245341 -84404955 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 1212 400 292 10 30 chrX 82245355 82245454 -84404842 - RSINE1 SINE B4 -25 140 44 4 1212 228 262 31 42 chrX 82245627 82245740 -84404556 - B3A SINE B2 -76 117 2 4 1212 624 306 14 9 chrX 82245771 82245989 -84404307 - ID_B1 SINE B4 -5 219 1 4 1212 380 337 46 20 chrX 82246012 82246209 -84404087 - L1MCa LINE L1 -5385 1366 1165 4 1212 201 94 0 0 chrX 82246213 82246245 -84404051 + (TTG)n Simple_repeat Simple_repeat 2 33 0 4 1212 583 216 82 0 chrX 82246246 82246380 -84403916 + B1F2 SINE Alu 3 147 -2 4 1212 368 282 49 44 chrX 82246423 82246471 -84403825 - L1MCa LINE L1 -5015 1030 980 4 1212 207 114 0 0 chrX 82246471 82246506 -84403790 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 4 1212 368 282 49 44 chrX 82246506 82246661 -84403635 - L1MCa LINE L1 -5066 979 826 4 1212 312 27 0 0 chrX 82248837 82248874 -84401422 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1212 26 64 0 0 chrX 82251768 82251815 -84398481 + AT_rich Low_complexity Low_complexity 1 47 0 4 1212 300 217 80 21 chrX 82252072 82252169 -84398127 + PB1D10 SINE Alu 6 127 0 4 1212 269 261 29 0 chrX 82252186 82252255 -84398041 + 4.5SRNA scRNA scRNA 21 91 -3 4 1212 574 341 54 25 chrX 82252255 82252535 -84397761 + B4A SINE B4 3 290 -2 4 1212 189 259 40 182 chrX 82252862 82252923 -84397373 - MIR3 SINE MIR -7 201 149 4 1212 198 0 0 0 chrX 82252923 82252945 -84397351 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 4 1212 1165 62 0 0 chrX 82252946 82253092 -84397204 - B1_Mus2 SINE Alu -1 146 1 4 1212 189 259 40 182 chrX 82253092 82253127 -84397169 - MIR3 SINE MIR -60 148 117 4 1212 280 307 167 0 chrX 82253272 82253422 -84396874 - MIRc SINE MIR -8 260 86 4 1212 294 344 112 31 chrX 82254104 82254584 -84395712 - L1ME3A LINE L1 -58 6115 5597 4 1212 381 256 0 0 chrX 82254782 82254864 -84395432 - ID4_ SINE ID -1 82 1 4 1212 192 152 0 0 chrX 82255066 82255099 -84395197 + GA-rich Low_complexity Low_complexity 3 35 0 4 1212 310 256 26 0 chrX 82255180 82255258 -84395038 + ID4_ SINE ID 2 81 -2 4 1212 267 377 0 0 chrX 82255308 82255414 -84394882 + GA-rich Low_complexity Low_complexity 3 108 0 4 1212 292 264 162 31 chrX 82255530 82255690 -84394606 - L1ME3A LINE L1 -2393 3753 3573 4 1212 1803 160 102 32 chrX 82255824 82256167 -84394129 + ORR1B2 LTR MaLR 1 367 0 4 1212 516 330 62 39 chrX 82256259 82256588 -84393708 - Charlie8 DNA MER1_type -2101 327 3 4 1212 2215 174 30 0 chrX 82256715 82257088 -84393208 - Lx5 LINE L1 -3 7047 6664 4 1212 465 19 0 0 chrX 82257288 82257342 -84392954 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 1212 318 260 26 13 chrX 82257344 82257422 -84392874 + ID4 SINE ID 3 81 -2 4 1212 4668 185 59 4 chrX 82259815 82260877 -84389419 - Lx4B LINE L1 -144 6856 5814 4 1212 1247 166 9 0 chrX 82260874 82261097 -84389199 + L1_Mur2 LINE L1 5242 5466 -411 4 1212 2480 220 20 69 chrX 82261096 82261577 -84388719 - Lx9 LINE L1 -245 7399 6950 4 1212 4487 82 20 3 chrX 82261577 82262188 -84388108 - L1_Mus2 LINE L1 -1 6565 5945 4 1212 2480 220 20 69 chrX 82262188 82262356 -84387940 - Lx9 LINE L1 -695 6949 6782 4 1212 291 28 0 0 chrX 82262358 82262394 -84387902 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 1212 264 77 0 0 chrX 82262914 82262953 -84387343 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1212 712 274 5 43 chrX 82263475 82263489 -84386807 - B3A SINE B2 -13 185 173 4 1212 575 27 14 0 chrX 82263489 82263562 -84386734 + (GA)n Simple_repeat Simple_repeat 1 74 0 4 1212 712 274 5 43 chrX 82263562 82263734 -84386562 - B3A SINE B2 -26 172 6 4 1212 22 56 0 0 chrX 82263742 82263778 -84386518 + AT_rich Low_complexity Low_complexity 1 36 0 4 1212 255 308 33 11 chrX 82263912 82264004 -84386292 - PB1D10 SINE Alu -7 110 17 4 1212 944 254 5 10 chrX 82264321 82264520 -84385776 - B3 SINE B2 -5 211 14 4 1212 837 208 98 5 chrX 82264562 82264755 -84385541 - B3 SINE B2 -5 211 1 4 1212 34 51 0 37 chrX 82265015 82265096 -84385200 + AT_rich Low_complexity Low_complexity 1 78 0 4 1212 1125 29 0 0 chrX 82265498 82265637 -84384659 + B1_Mus2 SINE Alu 9 147 0 4 1212 213 39 0 0 chrX 82265637 82265663 -84384633 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1212 576 256 27 80 chrX 82266043 82266230 -84384066 + B3 SINE B2 2 178 -38 4 1212 190 27 79 26 chrX 82266591 82266629 -84383667 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 4 1212 799 315 18 9 chrX 82266702 82266923 -84383373 - ID_B1 SINE B4 -1 223 1 4 1212 664 288 17 6 chrX 82267676 82267854 -84382442 + B3A SINE B2 1 180 -18 4 1212 22 35 0 0 chrX 82267875 82267904 -84382392 + AT_rich Low_complexity Low_complexity 1 29 0 4 1212 614 264 0 21 chrX 82267956 82268099 -84382197 - B1_Mur1 SINE Alu -7 142 3 4 1212 560 246 0 121 chrX 82268210 82268367 -84381929 + B1_Mur4 SINE Alu 13 150 0 4 1212 1133 81 0 26 chrX 82268400 82268552 -84381744 - B1_Mus1 SINE Alu 0 148 1 4 1212 1120 75 7 0 chrX 82268623 82268769 -84381527 - B1_Mus2 SINE Alu 0 147 1 4 1212 327 352 105 20 chrX 82269179 82269379 -84380917 + L3 LINE CR1 4254 4470 -19 4 1212 465 348 68 23 chrX 82269551 82269992 -84380304 - L1ME1 LINE L1 -9 6170 5710 4 1212 580 246 0 7 chrX 82270047 82270182 -84380114 + B1_Mur3 SINE Alu 3 136 -13 4 1212 270 0 0 0 chrX 82270183 82270213 -84380083 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 1212 228 362 0 14 chrX 82270662 82270732 -84379564 - MER58C DNA MER1_type -143 72 4 4 1212 225 0 0 0 chrX 82271156 82271181 -84379115 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 4 1212 4414 196 19 17 chrX 82271181 82272013 -84378283 - Lx4B LINE L1 -21 7037 6198 4 1212 3033 66 5 5 chrX 82272013 82272409 -84377887 - MTA_Mm LTR MaLR 0 396 1 4 1212 4414 196 19 17 chrX 82272409 82272453 -84377843 - Lx4B LINE L1 -861 6197 6159 4 1212 16862 143 89 20 chrX 82272458 82273570 -84376726 - Lx4B LINE L1 -114 5763 4623 4 1212 204 40 0 0 chrX 82273570 82273595 -84376701 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 4 1212 16862 143 89 20 chrX 82273595 82275743 -84374553 - Lx4B LINE L1 -1255 4622 2277 4 1212 23 0 0 0 chrX 82276715 82276738 -84373558 + GC_rich Low_complexity Low_complexity 1 23 0 4 1212 198 0 0 0 chrX 82276807 82276829 -84373467 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 4 1212 258 32 0 0 chrX 82276869 82276900 -84373396 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1212 28 0 0 0 chrX 82277372 82277400 -84372896 + AT_rich Low_complexity Low_complexity 1 28 0 4 1212 346 208 0 135 chrX 82277624 82277726 -84372570 + PB1D9 SINE Alu 19 107 -13 4 1212 198 71 0 0 chrX 82277726 82277754 -84372542 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 4 1212 530 288 0 23 chrX 82278167 82278295 -84372001 + RSINE1 SINE B4 6 130 -35 4 1212 459 264 83 38 chrX 82278387 82278651 -84371645 + L1MA8 LINE L1 6010 6285 -6 4 1212 304 298 18 46 chrX 82278651 82278760 -84371536 - L1ME3A LINE L1 -23 6150 6045 4 1212 531 340 43 0 chrX 82278772 82278934 -84371362 + B3A SINE B2 8 176 -22 4 1212 431 63 16 0 chrX 82279083 82279146 -84371150 + (TA)n Simple_repeat Simple_repeat 2 65 0 4 1212 198 0 0 0 chrX 82279145 82279167 -84371129 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 1212 358 314 189 5 chrX 82279167 82279574 -84370722 - L1ME3A LINE L1 -246 5927 5446 4 1212 213 323 31 10 chrX 82279579 82279676 -84370620 + L4 LINE RTE 1841 1939 -90 4 1212 238 259 0 0 chrX 82279692 82279747 -84370549 - ID2 SINE ID 0 83 29 4 1212 265 197 14 27 chrX 82279799 82279872 -84370424 + (TA)n Simple_repeat Simple_repeat 2 73 0 4 1212 1030 189 74 5 chrX 82279923 82280125 -84370171 + B3 SINE B2 1 216 0 4 1212 33 0 0 0 chrX 82280131 82280164 -84370132 + AT_rich Low_complexity Low_complexity 1 33 0 4 1212 612 283 0 0 chrX 82280176 82280321 -84369975 + B1F SINE Alu 4 148 -1 4 1212 200 35 35 0 chrX 82280348 82280377 -84369919 + (CAAAC)n Simple_repeat Simple_repeat 5 34 0 4 1212 943 237 14 14 chrX 82280531 82280745 -84369551 - B3 SINE B2 -2 214 1 4 1212 460 242 20 10 chrX 82280842 82280942 -84369354 - B3 SINE B2 -6 210 110 4 1212 830 218 57 21 chrX 82281013 82281205 -84369091 - B3 SINE B2 -17 199 1 4 1212 1252 48 0 0 chrX 82281610 82281757 -84368539 + B1_Mus1 SINE Alu 2 148 0 4 1212 561 90 0 0 chrX 82281758 82281847 -84368449 + (CAAAA)n Simple_repeat Simple_repeat 2 90 0 4 1212 491 0 17 0 chrX 82281855 82281914 -84368382 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 1212 806 288 14 14 chrX 82282138 82282346 -84367950 - B3 SINE B2 0 216 9 4 1212 6535 63 4 0 chrX 82282426 82283249 -84367047 + L1_Mus1 LINE L1 5742 6567 0 4 1212 186 103 0 0 chrX 82283262 82283291 -84367005 + (ATGGTG)n Simple_repeat Simple_repeat 4 32 0 5 1212 253 305 49 74 chrX 82283471 82283634 -84366662 - RMER4B LTR ERVK -417 168 10 5 1212 213 121 0 0 chrX 82283717 82283750 -84366546 + (CAT)n Simple_repeat Simple_repeat 1 33 0 5 1212 477 333 61 0 chrX 82283765 82283912 -84366384 - RSINE1 SINE B4 -7 158 3 5 1212 602 297 31 37 chrX 82284417 82284578 -84365718 + RSINE1 SINE B4 6 165 0 5 1212 230 269 94 111 chrX 82284578 82284597 -84365699 + B2_Mm2 SINE B2 5 181 -14 5 1212 295 300 33 22 chrX 82284698 82284724 -84365572 - ID_B1 SINE B4 -117 107 15 5 1212 319 273 0 0 chrX 82284724 82284790 -84365506 - ID4 SINE ID -3 80 15 5 1212 216 0 0 0 chrX 82285509 82285533 -84364763 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1212 3082 118 24 35 chrX 82288365 82288875 -84361421 - Lx LINE L1 -6 6648 6145 5 1212 1708 181 83 23 chrX 82289096 82289447 -84360849 + ORR1C2 LTR MaLR 1 372 -12 5 1212 228 323 56 70 chrX 82289462 82289605 -84360691 + MER5B DNA MER1_type 14 154 -24 5 1212 606 345 45 72 chrX 82290346 82290637 -84359659 - LTR33 LTR ERVL -184 331 49 5 1212 1152 55 0 7 chrX 82291000 82291147 -84359149 - B1_Mm SINE Alu -1 146 1 5 1212 212 340 26 86 chrX 82292858 82292974 -84357322 - MER5A DNA MER1_type -80 109 1 5 1212 826 169 7 34 chrX 82293011 82293158 -84357138 + B1_Mur2 SINE Alu 1 143 -6 5 1212 378 0 0 0 chrX 82294855 82294897 -84355399 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1212 315 113 0 0 chrX 82295434 82295487 -84354809 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1212 432 0 0 0 chrX 82296811 82296859 -84353437 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1212 790 231 50 10 chrX 82299871 82300072 -84350224 - B3 SINE B2 -6 210 2 5 1212 558 233 44 22 chrX 82300243 82300379 -84349917 + B1_Mur2 SINE Alu 9 147 -2 5 1212 656 206 51 7 chrX 82300640 82300777 -84349519 + B1_Mur1 SINE Alu 2 144 -5 5 1212 1365 94 5 0 chrX 82301191 82301382 -84348914 - B2_Mm1t SINE B2 0 193 2 5 1212 233 354 13 0 chrX 82301522 82301601 -84348695 + ID4 SINE ID 3 82 -1 5 1212 245 200 0 0 chrX 82301983 82302038 -84348258 - L1ME1 LINE L1 0 6179 6125 5 1212 351 0 0 0 chrX 82302468 82302507 -84347789 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 1212 275 288 0 0 chrX 82303708 82303774 -84346522 + ID4 SINE ID 8 73 -10 5 1212 1036 61 5 38 chrX 82303806 82303992 -84346304 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1212 21 36 0 0 chrX 82304071 82304099 -84346197 + AT_rich Low_complexity Low_complexity 1 28 0 5 1212 1126 59 0 0 chrX 82304567 82304703 -84345593 + B1_Mus1 SINE Alu 1 136 -12 5 1212 207 0 0 0 chrX 82304703 82304726 -84345570 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 5 1212 528 146 69 146 chrX 82304820 82304964 -84345332 + B1_Mus2 SINE Alu 10 142 -5 5 1212 3314 63 0 42 chrX 82304968 82305449 -84344847 - L1_Mus1 LINE L1 -396 6171 5711 5 1212 3189 69 2 0 chrX 82305450 82305858 -84344438 + L1_Mus1 LINE L1 6159 6567 0 5 1212 1173 61 0 7 chrX 82306549 82306697 -84343599 - B1_Mus2 SINE Alu 0 147 1 5 1212 214 323 79 16 chrX 82306814 82306940 -84343356 - MIRc SINE MIR 0 268 135 5 1212 314 261 109 52 chrX 82308313 82308363 -84341933 - B2_Mm2 SINE B2 -9 186 3 5 1212 671 210 8 0 chrX 82308363 82308487 -84341809 - RSINE1 SINE B4 -37 128 4 5 1212 407 310 106 0 chrX 82308530 82308672 -84341624 - Charlie10 DNA MER1_type -2560 262 106 5 1212 523 252 0 0 chrX 82309471 82309578 -84340718 + PB1D10 SINE Alu 1 107 -10 5 1212 385 336 98 60 chrX 82309751 82310157 -84340139 - LTR33A LTR ERVL -5 515 6 5 1212 192 200 39 91 chrX 82310555 82310632 -84339664 + L2c LINE L2 3314 3386 -1 5 1212 7550 6 0 0 chrX 82311143 82312020 -84338276 - L1Md_T LINE L1 0 6582 5706 5 1212 286 181 48 12 chrX 82312085 82312169 -84338127 - L1ME4a LINE L1 -71 6053 5967 5 1212 1088 95 7 0 chrX 82312243 82312390 -84337906 + B1_Mus1 SINE Alu 1 148 0 5 1212 267 73 55 0 chrX 82312392 82312447 -84337849 + (CAAAAA)n Simple_repeat Simple_repeat 3 60 0 5 1212 498 45 0 43 chrX 82312503 82312514 -84337782 - B1_Mm SINE Alu -1 146 137 5 1212 348 24 0 0 chrX 82312514 82312555 -84337741 + (TTTG)n Simple_repeat Simple_repeat 3 43 0 5 1212 498 45 0 43 chrX 82312555 82312613 -84337683 - B1_Mm SINE Alu -11 136 80 5 1212 297 0 0 0 chrX 82312669 82312702 -84337594 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1212 523 130 58 29 chrX 82312757 82312860 -84337436 - PB1D9 SINE Alu -7 113 8 5 1212 312 205 252 26 chrX 82312860 82312872 -84337424 - ID_B1 SINE B4 -7 217 77 5 1213 468 0 0 0 chrX 82313838 82313890 -84336406 + (TC)n Simple_repeat Simple_repeat 1 52 0 5 1213 507 17 0 0 chrX 82313890 82313949 -84336347 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 1213 24 42 0 20 chrX 82314322 82314352 -84335944 + AT_rich Low_complexity Low_complexity 1 30 0 5 1213 1169 75 0 0 chrX 82314352 82314499 -84335797 - B1_Mus2 SINE Alu 0 147 1 5 1213 24 42 0 20 chrX 82314499 82314517 -84335779 + AT_rich Low_complexity Low_complexity 1 18 0 5 1213 5646 57 25 1 chrX 82314988 82315715 -84334581 - L1Md_F2 LINE L1 -4 6578 5835 5 1213 449 301 18 0 chrX 82316057 82316170 -84334126 - PB1D10 SINE Alu 0 117 3 5 1213 275 264 21 84 chrX 82316091 82316186 -84334110 - MT2B2 LTR ERVL -344 240 152 5 1213 213 39 0 0 chrX 82316655 82316681 -84333615 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 5 1213 279 245 264 35 chrX 82317314 82317458 -84332838 - Tigger16b DNA Tigger -50 287 111 5 1213 201 121 0 0 chrX 82318099 82318132 -84332164 + (CAA)n Simple_repeat Simple_repeat 1 33 0 5 1213 261 57 0 0 chrX 82318418 82318453 -84331843 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 5 1213 270 328 0 0 chrX 82318551 82318612 -84331684 + tRNA-Ala-GCY_ tRNA tRNA 6 66 -9 5 1213 229 272 144 34 chrX 82318843 82318961 -84331335 - RMER2 LTR ERV1 -27 540 410 5 1213 233 273 0 18 chrX 82319411 82319467 -84330829 + ID4_ SINE ID 3 57 -26 5 1213 552 30 0 0 chrX 82320530 82320596 -84329700 + (TC)n Simple_repeat Simple_repeat 2 67 0 5 1213 515 146 10 59 chrX 82320599 82320701 -84329595 - B1_Mur4 SINE Alu -11 139 43 5 1213 238 315 0 33 chrX 82320701 82320793 -84329503 + (TCTCTG)n Simple_repeat Simple_repeat 4 92 0 5 1213 956 227 36 0 chrX 82320811 82321005 -84329291 + B3 SINE B2 1 201 -15 5 1213 200 200 0 0 chrX 82321084 82321124 -84329172 + C-rich Low_complexity Low_complexity 3 42 0 5 1213 252 86 0 0 chrX 82321124 82321159 -84329137 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1213 785 256 148 56 chrX 82321395 82321734 -84328562 + MER31A LTR ERV1 8 377 -108 5 1213 315 0 0 0 chrX 82322291 82322326 -84327970 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1213 660 173 14 21 chrX 82322427 82322569 -84327727 + B1_Mus2 SINE Alu 1 141 -6 5 1213 415 293 125 48 chrX 82323068 82323276 -84327020 - MER102b DNA MER1_type -21 320 97 5 1213 643 191 52 0 chrX 82323789 82323904 -84326392 - B1_Mur1 SINE Alu -6 143 23 5 1213 201 376 107 42 chrX 82325279 82325587 -84324709 + L2b LINE L2 3023 3350 -25 5 1213 372 290 9 0 chrX 82326085 82326192 -84324104 + PB1D10 SINE Alu 1 108 -9 5 1213 238 358 119 24 chrX 82326345 82326471 -84323825 + B1F1 SINE Alu 5 142 -7 5 1213 21 36 0 0 chrX 82326531 82326559 -84323737 + AT_rich Low_complexity Low_complexity 1 28 0 5 1213 658 278 23 0 chrX 82326581 82326757 -84323539 - B3A SINE B2 -18 180 1 5 1213 504 0 0 0 chrX 82326861 82326917 -84323379 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1213 325 211 47 19 chrX 82326927 82327033 -84323263 + Lx9 LINE L1 7534 7642 -2 5 1213 472 250 115 46 chrX 82327732 82327950 -84322346 - Lx8 LINE L1 -25 7448 7216 5 1213 389 307 42 28 chrX 82328028 82328172 -84322124 + B1F1 SINE Alu 3 148 -1 5 1213 22 56 0 0 chrX 82328585 82328621 -84321675 + AT_rich Low_complexity Low_complexity 1 36 0 5 1213 599 145 179 0 chrX 82329213 82329330 -84320966 + B1_Mur2 SINE Alu 1 138 -11 5 1213 342 80 0 0 chrX 82329332 82329382 -84320914 + (CAA)n Simple_repeat Simple_repeat 2 51 0 5 1213 583 254 65 38 chrX 82331225 82331409 -84318887 + MER5A DNA MER1_type 1 189 0 5 1213 789 262 146 66 chrX 82331415 82331577 -84318719 - LTR82B Low_complexity ERVL -349 481 23 5 1213 919 245 23 53 chrX 82331577 82331840 -84318456 - LTR82A LTR ERVL -595 277 23 5 1213 242 245 105 35 chrX 82331844 82331958 -84318338 - L1ME2 LINE L1 -2 6177 6053 5 1213 360 281 186 24 chrX 82332085 82332333 -84317963 - L1MC4 LINE L1 -2175 5867 5580 5 1213 1072 209 28 5 chrX 82332336 82332547 -84317749 + B3 SINE B2 1 216 0 5 1213 341 262 64 27 chrX 82332571 82332681 -84317615 - L1MD LINE L1 -2403 5592 5479 5 1213 1880 232 33 46 chrX 82333247 82333704 -84316592 + Lx6 LINE L1 6838 7288 -172 5 1213 29 70 0 0 chrX 82334058 82334115 -84316181 + AT_rich Low_complexity Low_complexity 1 57 0 5 1213 452 242 43 38 chrX 82334321 82334531 -84315765 + L1MA8 LINE L1 6078 6288 -3 5 1213 22 0 0 0 chrX 82335424 82335446 -84314850 + AT_rich Low_complexity Low_complexity 1 22 0 5 1213 594 159 167 0 chrX 82335658 82335784 -84314512 - B1_Mur3 SINE Alu -2 147 1 5 1213 316 361 78 69 chrX 82336158 82336661 -84313635 - L2c LINE L2 -188 3199 2677 6 1213 213 211 0 0 chrX 82336823 82336861 -84313435 + GA-rich Low_complexity Low_complexity 6 43 0 6 1213 215 254 45 0 chrX 82337291 82337358 -84312938 + RSINE1 SINE B4 16 85 -80 6 1213 930 78 0 8 chrX 82337307 82337437 -84312859 + B2_Mm2 SINE B2 34 162 -33 6 1213 210 37 0 0 chrX 82337437 82337464 -84312832 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 6 1213 282 342 19 45 chrX 82337510 82337666 -84312630 - L2c LINE L2 -2496 923 772 6 1213 246 62 0 0 chrX 82340680 82340712 -84309584 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 1213 1070 317 3 14 chrX 82340715 82341080 -84309216 - Lx8 LINE L1 -536 6937 6577 6 1213 267 202 15 61 chrX 82341119 82341203 -84309093 + Lx7 LINE L1 6483 6567 -906 6 1213 26 64 0 0 chrX 82341397 82341444 -84308852 + AT_rich Low_complexity Low_complexity 1 47 0 6 1213 1556 204 69 16 chrX 82342495 82342814 -84307482 - MTD LTR MaLR -78 341 6 6 1213 3114 157 83 24 chrX 82343956 82344581 -84305715 - RMER1B Other Other -16 1050 389 6 1213 954 300 57 20 chrX 82344689 82345243 -84305053 - RMER1B Other Other -507 835 40 6 1213 335 238 76 0 chrX 82345285 82345390 -84304906 - ID_B1 SINE B4 0 224 112 6 1213 186 71 0 0 chrX 82345729 82345757 -84304539 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 1213 2633 268 116 28 chrX 82345999 82346051 -84304245 - Lx7 LINE L1 -284 7412 7358 6 1213 183 42 0 0 chrX 82346051 82346075 -84304221 + (CAGA)n Simple_repeat Simple_repeat 2 25 0 6 1213 2633 268 116 28 chrX 82346075 82347063 -84303233 - Lx7 LINE L1 -339 7357 6280 6 1213 775 258 35 45 chrX 82347273 82347472 -84302824 + B3A SINE B2 1 197 -1 6 1213 684 237 63 94 chrX 82347526 82347717 -84302579 - B3 SINE B2 -6 210 26 6 1213 360 0 0 0 chrX 82348851 82348891 -84301405 + (CAA)n Simple_repeat Simple_repeat 2 41 0 6 1213 223 296 141 82 chrX 82350699 82350802 -84299494 + ID_B1 SINE B4 7 224 0 6 1213 420 165 291 0 chrX 82350802 82350905 -84299391 + B1_Mur2 SINE Alu 17 149 0 6 1213 279 0 0 0 chrX 82351229 82351260 -84299036 + (TTG)n Simple_repeat Simple_repeat 3 33 0 6 1213 540 0 0 0 chrX 82351581 82351641 -84298655 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 6 1213 26 0 0 0 chrX 82353552 82353578 -84296718 + AT_rich Low_complexity Low_complexity 1 26 0 6 1213 254 245 5 28 chrX 82354069 82354167 -84296129 + PB1D10 SINE Alu 55 149 -1 6 1213 674 325 7 0 chrX 82354468 82354619 -84295677 + RSINE1 SINE B4 2 153 -12 6 1213 487 333 0 15 chrX 82354667 82354798 -84295498 + RSINE1 SINE B4 15 143 -22 6 1213 210 171 0 0 chrX 82355119 82355154 -84295142 + A-rich Low_complexity Low_complexity 1 35 0 6 1213 489 62 0 0 chrX 82355453 82355518 -84294778 + (TTTA)n Simple_repeat Simple_repeat 4 68 0 6 1213 181 235 58 19 chrX 82355801 82355853 -84294443 + MIRb SINE MIR 39 92 -176 6 1213 387 145 0 0 chrX 82356153 82356222 -84294074 + (TCC)n Simple_repeat Simple_repeat 2 70 0 6 1213 410 132 0 13 chrX 82356346 82356423 -84293873 + (TC)n Simple_repeat Simple_repeat 1 76 0 6 1213 183 139 0 0 chrX 82356457 82356493 -84293803 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1213 490 346 65 65 chrX 82356505 82356796 -84293500 - B4 SINE B4 -1 291 1 6 1213 244 301 0 37 chrX 82356804 82356911 -84293385 - L1M5 LINE L1 -452 5672 5570 6 1213 519 45 0 0 chrX 82358138 82358204 -84292092 + (GA)n Simple_repeat Simple_repeat 1 66 0 6 1213 213 39 0 0 chrX 82359292 82359318 -84290978 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1213 637 279 14 0 chrX 82359606 82359746 -84290550 + B1F1 SINE Alu 7 148 -1 6 1213 808 265 47 51 chrX 82359749 82359984 -84290312 + B4A SINE B4 1 234 -58 6 1213 471 300 19 32 chrX 82359977 82360132 -84290164 + RSINE1 SINE B4 12 164 -1 6 1213 624 261 68 16 chrX 82360692 82360883 -84289413 + B3A SINE B2 13 212 -4 6 1213 185 294 14 56 chrX 82361518 82361590 -84288706 + MIRc SINE MIR 157 225 -43 6 1213 3059 131 36 6 chrX 82362296 82362797 -84287499 - Lx4A LINE L1 0 7058 6543 6 1213 246 184 20 0 chrX 82362954 82363003 -84287293 - B1_Mur1 SINE Alu -1 148 99 6 1213 330 26 0 0 chrX 82363030 82363069 -84287227 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1213 267 279 67 34 chrX 82363119 82363208 -84287088 - RSINE1 SINE B4 -72 93 2 6 1213 630 301 78 41 chrX 82363260 82363503 -84286793 + B4A SINE B4 31 282 -10 6 1213 477 0 0 0 chrX 82365037 82365090 -84285206 + (TC)n Simple_repeat Simple_repeat 1 53 0 6 1213 225 0 0 0 chrX 82365090 82365114 -84285182 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 1213 1739 175 123 105 chrX 82365128 82365575 -84284721 - MT2A LTR ERVL -78 455 1 6 1213 1134 62 14 0 chrX 82365677 82365821 -84284475 + B1_Mm SINE Alu 1 146 -1 6 1213 969 233 0 14 chrX 82365832 82366050 -84284246 - B3 SINE B2 -1 215 1 6 1213 233 266 43 17 chrX 82366328 82366443 -84283853 - L1MC4a LINE L1 -689 7193 7076 6 1213 206 280 98 45 chrX 82367124 82367236 -84283060 + MIR3 SINE MIR 87 204 -4 6 1213 344 374 75 32 chrX 82368290 82368572 -84281724 - Helitron3Na_Mam RC Helitron -50 436 143 6 1213 654 324 14 42 chrX 82368634 82368850 -84281446 - MER20 DNA MER1_type -9 210 1 6 1213 280 331 118 0 chrX 82368868 82368995 -84281301 - Helitron3Na_Mam RC Helitron -325 161 20 6 1213 523 246 89 7 chrX 82369010 82369145 -84281151 - ID_B1 SINE B4 -9 215 70 6 1213 808 305 9 40 chrX 82369994 82370216 -84280080 - ID_B1 SINE B4 -1 223 9 6 1213 357 62 0 0 chrX 82370627 82370675 -84279621 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1213 869 254 59 117 chrX 82371003 82371378 -84278918 - L3b LINE CR1 -106 376 24 6 1213 278 116 209 0 chrX 82371551 82371604 -84278692 - B1_Mur2 SINE Alu -21 126 64 6 1213 359 262 117 0 chrX 82371650 82371753 -84278543 - Lx8 LINE L1 -141 7332 7218 6 1213 7372 206 39 54 chrX 82371790 82373005 -84277291 - Lx7 LINE L1 -280 7416 6160 6 1213 5326 49 3 7 chrX 82373005 82373679 -84276617 + L1Md_F2 LINE L1 5912 6582 0 6 1213 1119 79 0 0 chrX 82373689 82373829 -84276467 + B1_Mus2 SINE Alu 1 140 -7 6 1213 561 30 0 0 chrX 82373832 82373899 -84276397 + (GA)n Simple_repeat Simple_repeat 2 68 0 6 1213 7372 206 39 54 chrX 82373899 82373910 -84276386 - Lx7 LINE L1 -1537 6159 6159 6 1213 378 0 0 0 chrX 82373910 82373952 -84276344 + (GGAAA)n Simple_repeat Simple_repeat 4 45 0 6 1213 7372 206 39 54 chrX 82373952 82373964 -84276332 - Lx7 LINE L1 -1537 6159 6159 6 1213 1278 55 0 0 chrX 82373964 82374127 -84276169 + (GAAA)n Simple_repeat Simple_repeat 3 165 0 6 1213 7372 210 38 50 chrX 82374127 82374787 -84275509 - Lx7 LINE L1 -1537 6159 5529 6 1213 243 237 17 0 chrX 82374785 82374844 -84275452 - Lx8 LINE L1 -260 7213 7154 6 1213 497 346 62 8 chrX 82375063 82375319 -84274977 - B4A SINE B4 -18 274 5 6 1213 766 30 20 0 chrX 82375319 82375420 -84274876 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 6 1213 339 269 64 0 chrX 82375436 82375514 -84274782 - ID4_ SINE ID 0 83 1 6 1213 22 0 0 0 chrX 82375573 82375595 -84274701 + AT_rich Low_complexity Low_complexity 1 22 0 6 1213 1489 188 21 158 chrX 82375686 82376011 -84274285 - RMER17C LTR ERVK 0 410 95 6 1213 1178 68 0 0 chrX 82376011 82376157 -84274139 + B1_Mus1 SINE Alu 1 146 -2 6 1213 1489 188 21 158 chrX 82376157 82376306 -84273990 - RMER17C LTR ERVK -316 94 1 6 1213 4661 125 70 16 chrX 82376306 82376651 -84273645 - RMER17C-int LTR ERVK 0 3238 2876 6 1213 351 0 0 0 chrX 82376651 82376690 -84273606 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1213 4661 125 70 16 chrX 82376690 82377196 -84273100 - RMER17C-int LTR ERVK -363 2875 2342 6 1213 5627 136 35 26 chrX 82377195 82378223 -84272073 - RMER17C-int LTR ERVK -1069 2169 1133 6 1213 1448 228 128 95 chrX 82378203 82379191 -84271105 - RMER17C-int LTR ERVK -2008 1230 211 6 1213 278 137 59 0 chrX 82379239 82379290 -84271006 - RMER17C-int LTR ERVK -3176 62 9 6 1213 1520 138 21 231 chrX 82379290 82379806 -84270490 - RMER17C LTR ERVK -2 408 1 6 1213 290 336 97 46 chrX 82379929 82380188 -84270108 + L3 LINE CR1 3299 3570 -919 6 1213 221 210 0 16 chrX 82380192 82380255 -84270041 + CT-rich Low_complexity Low_complexity 3 64 0 6 1213 763 220 0 7 chrX 82380268 82380410 -84269886 - B1_Mur2 SINE Alu -6 143 3 6 1213 185 245 82 0 chrX 82381105 82381154 -84269142 + L4 LINE RTE 975 1027 -1002 6 1213 358 366 16 21 chrX 82381147 82381337 -84268959 - MIR SINE MIR -27 235 47 6 1213 754 244 43 9 chrX 82382151 82382362 -84267934 - Lx6 LINE L1 -177 7283 7066 6 1213 180 0 0 0 chrX 82382371 82382391 -84267905 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 6 1213 23 78 0 0 chrX 82382621 82382672 -84267624 + AT_rich Low_complexity Low_complexity 1 51 0 6 1213 1170 95 60 0 chrX 82382712 82382880 -84267416 + B2_Mm1t SINE B2 2 179 -14 6 1213 333 135 319 26 chrX 82382947 82383060 -84267236 + B2_Mm2 SINE B2 47 192 -3 6 1213 539 308 53 0 chrX 82383059 82383228 -84267068 + B3 SINE B2 33 210 -6 6 1213 312 337 0 0 chrX 82383437 82383538 -84266758 + L1MEg LINE L1 1027 1127 -4957 6 1213 329 282 93 89 chrX 82383547 82383860 -84266436 + L1MEg LINE L1 1239 1569 -4439 6 1213 281 335 111 50 chrX 82384968 82385166 -84265130 + 7SK RNA RNA 11 220 -111 6 1213 1092 89 0 0 chrX 82387263 82387421 -84262875 + (TTCC)n Simple_repeat Simple_repeat 1 158 0 6 1213 263 290 41 61 chrX 82387707 82387854 -84262442 - MIR SINE MIR -56 206 63 6 1213 245 330 78 0 chrX 82387953 82388056 -84262240 + MER5A1 DNA MER1_type 27 137 -29 6 1213 376 338 71 26 chrX 82388323 82388470 -84261826 - B4A SINE B4 0 292 139 6 1213 2155 206 86 11 chrX 82388470 82388562 -84261734 - RLTR20B2 LTR ERVK 0 560 467 6 1213 423 0 0 0 chrX 82388562 82388609 -84261687 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1213 2155 206 86 11 chrX 82388609 82389037 -84261259 - RLTR20B2 LTR ERVK -94 466 2 6 1213 558 271 85 8 chrX 82389038 82389168 -84261128 - B4A SINE B4 -150 142 3 6 1213 203 79 26 0 chrX 82389640 82389678 -84260618 + (CAA)n Simple_repeat Simple_repeat 2 40 0 6 1213 231 215 10 70 chrX 82390334 82390434 -84259862 + (TTTA)n Simple_repeat Simple_repeat 3 96 0 6 1213 239 314 0 120 chrX 82391013 82391122 -84259174 + AluG_3 SINE Alu 26 220 -91 6 1213 264 291 25 12 chrX 82397141 82397221 -84253075 - ID SINE ID -142 82 2 6 1213 475 252 45 0 chrX 82397334 82397445 -84252851 + PB1D10 SINE Alu 2 117 0 6 1213 25 0 0 0 chrX 82398026 82398051 -84252245 + AT_rich Low_complexity Low_complexity 1 25 0 7 1213 422 297 40 46 chrX 82400383 82400403 -84249893 - MIR SINE MIR -26 236 217 7 1213 282 295 13 0 chrX 82400403 82400481 -84249815 - ID4_ SINE ID -4 79 1 7 1213 438 302 39 46 chrX 82400481 82400681 -84249615 - MIRb SINE MIR -44 224 29 7 1213 607 234 14 7 chrX 82402830 82402968 -84247328 + B1_Mur1 SINE Alu 3 141 -8 7 1213 2085 232 7 10 chrX 82403065 82403478 -84246818 + MTC LTR MaLR 1 412 -9 7 1213 2841 146 51 20 chrX 82404348 82404836 -84245460 - Lx4A LINE L1 -1 7057 6555 7 1213 213 65 0 0 chrX 82406420 82406451 -84243845 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 7 1213 574 116 53 9 chrX 82406794 82406907 -84243389 - Lx2B LINE L1 -4 6996 6879 7 1213 1183 134 32 0 chrX 82409304 82409491 -84240805 + B2_Mm2 SINE B2 3 195 0 7 1213 661 264 16 71 chrX 82409573 82409895 -84240401 - L1MB8 LINE L1 -12 6166 5863 7 1213 186 43 0 0 chrX 82409985 82410008 -84240288 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 7 1213 1354 232 3 14 chrX 82410008 82410297 -84239999 - Lx5 LINE L1 -14 7036 6751 7 1213 3994 102 71 69 chrX 82410297 82411005 -84239291 - L1_Mm LINE L1 -964 4919 4211 7 1213 296 228 59 0 chrX 82410997 82411098 -84239198 - L1MB8 LINE L1 -368 5816 5710 7 1213 303 136 0 0 chrX 82412230 82412289 -84238007 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 7 1213 1251 68 0 0 chrX 82413341 82413504 -84236792 - L1Md_T LINE L1 0 6582 6420 7 1213 290 326 11 0 chrX 82414284 82414376 -84235920 + PB1D10 SINE Alu 15 107 -10 7 1213 619 305 110 28 chrX 82414490 82414672 -84235624 + B3A SINE B2 1 197 -1 7 1213 320 288 33 132 chrX 82414776 82414928 -84235368 + B1F SINE Alu 12 148 -1 7 1213 1017 232 5 19 chrX 82414978 82415193 -84235103 + B3 SINE B2 1 212 -4 7 1213 341 243 43 0 chrX 82415349 82415419 -84234877 + B1F1 SINE Alu 73 145 -4 7 1213 826 248 66 43 chrX 82417207 82417418 -84232878 - B3 SINE B2 0 216 1 7 1213 685 203 7 15 chrX 82418822 82418957 -84231339 + B1_Mur1 SINE Alu 14 147 -2 7 1213 254 281 95 43 chrX 82419032 82419285 -84231011 + L1M5 LINE L1 4490 4755 -1391 7 1213 452 309 92 14 chrX 82419530 82419671 -84230625 - RSINE1 SINE B4 -8 157 6 7 1213 405 0 0 0 chrX 82419690 82419735 -84230561 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1213 333 0 0 0 chrX 82419735 82419771 -84230525 + (TA)n Simple_repeat Simple_repeat 1 37 0 7 1213 5495 194 65 49 chrX 82419778 82421061 -84229235 - Lx7 LINE L1 0 7696 6393 7 1213 287 174 58 0 chrX 82421097 82421183 -84229113 + (TA)n Simple_repeat Simple_repeat 2 92 0 7 1213 385 253 111 31 chrX 82421388 82421526 -84228770 - Lx4B LINE L1 -49 7009 6862 7 1213 440 248 117 23 chrX 82421526 82421654 -84228642 - ORR1E LTR MaLR -219 140 1 7 1213 293 331 69 47 chrX 82421713 82421989 -84228307 + L1M5 LINE L1 5456 5737 -503 7 1213 571 87 9 9 chrX 82422547 82422652 -84227644 + (TG)n Simple_repeat Simple_repeat 2 106 0 7 1213 2449 77 6 3 chrX 82424430 82424756 -84225540 - ORR1A2 LTR MaLR 0 327 1 7 1213 1034 263 30 66 chrX 82424879 82425180 -84225116 + MTEa LTR MaLR 5 294 -85 7 1213 423 0 0 0 chrX 82425550 82425597 -84224699 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 1213 686 257 11 27 chrX 82425623 82425807 -84224489 - B3A SINE B2 -17 181 1 7 1213 1103 291 99 13 chrX 82425961 82426333 -84223963 - MTD LTR MaLR -14 405 2 7 1213 1338 254 41 49 chrX 82426563 82426931 -84223365 - MTEa LTR MaLR 0 379 15 7 1213 567 237 22 7 chrX 82427644 82427780 -84222516 + B1F1 SINE Alu 5 142 -7 7 1213 706 270 124 19 chrX 82429025 82429282 -84221014 + MER2 DNA MER2_type 1 284 -61 7 1213 380 336 91 80 chrX 82429843 82430019 -84220277 - L1MC4 LINE L1 -103 7939 7758 7 1213 293 316 0 0 chrX 82430019 82430095 -84220201 + ID4_ SINE ID 5 80 -3 7 1213 380 336 91 80 chrX 82430095 82430432 -84219864 - L1MC4 LINE L1 -285 7757 7420 7 1213 375 108 77 0 chrX 82431034 82431099 -84219197 - Lx2 LINE L1 0 6997 6928 7 1213 297 0 0 0 chrX 82431267 82431300 -84218996 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 7 1213 923 213 53 53 chrX 82431300 82431346 -84218950 - B3 SINE B2 -8 208 163 7 1213 1677 176 102 6 chrX 82431346 82431678 -84218618 - ORR1B2 LTR MaLR -2 365 2 7 1213 923 213 53 53 chrX 82431678 82431839 -84218457 - B3 SINE B2 -54 162 1 7 1213 294 370 25 50 chrX 82433160 82433359 -84216937 + L2a LINE L2 2954 3147 -279 7 1213 594 238 63 0 chrX 82433402 82433528 -84216768 - B3A SINE B2 -64 134 1 7 1213 355 71 57 0 chrX 82438109 82438179 -84212117 + (CAAAAA)n Simple_repeat Simple_repeat 2 75 0 7 1213 582 267 200 0 chrX 82438262 82438502 -84211794 - B4A SINE B4 -2 290 3 7 1213 312 27 0 0 chrX 82438641 82438678 -84211618 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1213 287 284 137 36 chrX 82439006 82439145 -84211151 - MER112 DNA MER1_type -73 188 36 7 1213 25 31 0 0 chrX 82439206 82439238 -84211058 + AT_rich Low_complexity Low_complexity 1 32 0 7 1213 286 254 0 0 chrX 82440553 82440616 -84209680 + tRNA-Ala-GCY_ tRNA tRNA 4 66 -9 7 1213 286 297 0 0 chrX 82440616 82440627 -84209669 + ID4 SINE ID 10 83 0 7 1213 1222 199 0 5 chrX 82440646 82440858 -84209438 + B3 SINE B2 1 211 -5 7 1213 654 294 20 41 chrX 82440999 82441194 -84209102 + MER58A DNA MER1_type 34 224 0 7 1213 1216 184 14 0 chrX 82442074 82442292 -84208004 + URR1A DNA MER1_type 1 221 -5 7 1213 213 231 0 0 chrX 82442952 82442991 -84207305 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1213 548 296 84 38 chrX 82443370 82443609 -84206687 - MIR SINE MIR -5 257 8 7 1213 588 273 117 0 chrX 82444080 82444234 -84206062 + B3A SINE B2 1 172 -26 7 1214 395 258 106 11 chrX 82446210 82446304 -84203992 - PB1D10 SINE Alu -2 115 13 7 1214 486 0 0 0 chrX 82446342 82446396 -84203900 + (TA)n Simple_repeat Simple_repeat 2 55 0 7 1214 626 91 10 0 chrX 82448266 82448365 -84201931 + (CA)n Simple_repeat Simple_repeat 2 101 0 7 1214 243 0 0 0 chrX 82449089 82449116 -84201180 + (TTG)n Simple_repeat Simple_repeat 1 27 0 7 1214 437 254 36 50 chrX 82450411 82450573 -84199723 - PB1 SINE Alu 0 311 17 7 1214 253 217 14 28 chrX 82450598 82450669 -84199627 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 7 1214 487 276 66 1 chrX 82450856 82450992 -84199304 + B1F2 SINE Alu 7 149 0 7 1214 674 258 82 52 chrX 82451087 82451320 -84198976 - B4A SINE B4 -43 249 10 7 1214 302 98 20 0 chrX 82452672 82452723 -84197573 + (TA)n Simple_repeat Simple_repeat 1 52 0 7 1214 420 20 0 0 chrX 82452876 82452925 -84197371 + (TC)n Simple_repeat Simple_repeat 1 49 0 7 1214 246 32 0 0 chrX 82452925 82452955 -84197341 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 1214 1001 285 51 19 chrX 82452975 82453153 -84197143 - L1MC4 LINE L1 -183 7859 7678 7 1214 221 0 0 33 chrX 82453153 82453183 -84197113 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1214 1001 285 51 19 chrX 82453183 82453516 -84196780 - L1MC4 LINE L1 -365 7677 7332 7 1214 3808 94 29 7 chrX 82453823 82454378 -84195918 + RMER2 LTR ERV1 1 567 0 7 1214 4385 111 17 9 chrX 82454415 82455070 -84195226 - Lx4A LINE L1 -9 7049 6390 7 1214 249 290 36 24 chrX 82455244 82455336 -84194960 + ID2 SINE ID 1 93 -59 7 1214 236 175 45 45 chrX 82455872 82455938 -84194358 + MER94 DNA AcHobo 41 106 -28 7 1214 381 345 107 37 chrX 82456295 82456623 -84193673 + LTR16A1 LTR ERVL 22 372 -84 7 1214 726 332 116 41 chrX 82456762 82457731 -84192565 + L2a LINE L2 2290 3335 -91 7 1214 238 265 28 42 chrX 82458047 82458118 -84192178 + L3b LINE CR1 170 239 -243 7 1214 345 266 0 48 chrX 82458128 82458211 -84192085 + B3A SINE B2 3 81 -117 7 1214 1286 212 123 18 chrX 82458543 82458869 -84191427 + ORR1D1 LTR MaLR 15 374 0 7 1214 435 52 0 0 chrX 82460696 82460754 -84189542 + (CA)n Simple_repeat Simple_repeat 2 59 0 7 1214 278 185 24 36 chrX 82461568 82461652 -84188644 - L1ME4a LINE L1 -46 6078 5996 7 1214 32358 87 8 5 chrX 82461679 82467822 -84182474 - L1Md_F2 LINE L1 -2 6580 422 7 1214 403 325 12 48 chrX 82467952 82468117 -84182179 - RSINE1 SINE B4 -6 159 1 7 1214 474 284 149 0 chrX 82468383 82468531 -84181765 - MLT2D LTR ERVL -56 358 189 7 1214 261 0 0 0 chrX 82468531 82468560 -84181736 + (TC)n Simple_repeat Simple_repeat 1 29 0 7 1214 505 225 134 86 chrX 82468560 82468609 -84181687 - MLT2D LTR ERVL -191 223 187 7 1214 5132 119 61 8 chrX 82468609 82469394 -84180902 - Lx4A LINE L1 -2 7056 6230 7 1214 505 225 134 86 chrX 82469394 82469553 -84180743 - MLT2D LTR ERVL -228 186 5 7 1214 295 341 11 0 chrX 82469645 82469733 -84180563 - MER58A DNA MER1_type -134 90 2 7 1214 383 299 86 53 chrX 82469740 82469927 -84180369 + MIRb SINE MIR 76 268 0 7 1214 396 0 0 0 chrX 82472367 82472411 -84177885 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 1214 746 343 97 47 chrX 82472662 82473087 -84177209 + LTR16A LTR ERVL 1 446 -5 7 1214 4064 119 6 47 chrX 82473581 82474235 -84176061 - Lx LINE L1 -6 6648 6022 7 1214 2214 163 86 29 chrX 82474469 82475014 -84175282 + Lx6 LINE L1 2572 3147 -2730 7 1214 1988 56 11 0 chrX 82475011 82475358 -84174938 + L1_Mus1 LINE L1 6292 6567 0 7 1214 11197 181 22 57 chrX 82475358 82476114 -84174182 + Lx6 LINE L1 3151 3890 -1990 7 1214 4828 37 0 2 chrX 82476114 82476685 -84173611 + L1Md_F2 LINE L1 6000 6569 -13 7 1214 436 59 29 0 chrX 82476688 82476756 -84173540 + (TA)n Simple_repeat Simple_repeat 2 71 0 7 1214 11197 181 22 57 chrX 82476756 82477191 -84173105 + Lx6 LINE L1 3891 4278 -1602 7 1214 396 0 0 0 chrX 82477191 82477235 -84173061 + (CAAT)n Simple_repeat Simple_repeat 3 46 0 7 1214 11197 181 22 57 chrX 82477235 82477494 -84172802 + Lx6 LINE L1 4279 4512 -1368 7 1214 1436 130 0 18 chrX 82477494 82477721 -84172575 + Lx2 LINE L1 6775 6997 0 7 1214 11197 194 23 51 chrX 82477721 82479560 -84170736 + Lx6 LINE L1 4513 6581 -879 7 1214 1274 268 93 32 chrX 82479557 82480112 -84170184 + Lx6 LINE L1 6479 7434 -26 8 1214 246 167 18 18 chrX 82480317 82480372 -84169924 + Lx2 LINE L1 5679 5733 -1264 8 1214 300 327 125 6 chrX 82480939 82481099 -84169197 - MER63B DNA AcHobo -1 435 257 8 1214 349 304 77 6 chrX 82481102 82481284 -84169012 + L1ME1 LINE L1 5694 5888 -291 8 1214 24 0 0 0 chrX 82481962 82481986 -84168310 + AT_rich Low_complexity Low_complexity 1 24 0 8 1214 326 219 51 66 chrX 82482017 82482154 -84168142 - Lx9 LINE L1 -50 7594 7460 8 1214 485 215 0 0 chrX 82483056 82483135 -84167161 + B3 SINE B2 1 79 -137 8 1214 189 302 0 0 chrX 82483353 82483396 -84166900 - L2 LINE L2 -615 2804 2762 8 1214 243 281 166 71 chrX 82483568 82483863 -84166433 - MLT1H2 LTR MaLR -19 470 148 8 1214 345 289 24 0 chrX 82483950 82484033 -84166263 + BC1_Mm scRNA scRNA 1 85 -67 8 1214 1000 245 0 0 chrX 82484120 82484328 -84165968 + B3 SINE B2 3 210 -6 8 1214 548 110 18 27 chrX 82484929 82485041 -84165255 + L1Md_F3 LINE L1 6473 6583 -1 8 1214 1370 176 44 47 chrX 82485263 82485603 -84164693 - Lx7 LINE L1 0 7696 7358 8 1214 192 77 0 0 chrX 82485615 82485641 -84164655 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 8 1214 256 236 0 0 chrX 82485679 82485734 -84164562 - Lx7 LINE L1 -362 7334 7280 8 1214 463 157 12 12 chrX 82485739 82485823 -84164473 - Lx7 LINE L1 -1362 6334 6251 8 1214 3386 176 87 102 chrX 82485827 82486055 -84164241 + RMER19B LTR ERVK 5 172 -730 8 1214 1604 52 0 0 chrX 82486055 82486248 -84164048 - B2_Mm1t SINE B2 0 193 1 8 1214 3386 176 87 102 chrX 82486248 82486911 -84163385 + RMER19B LTR ERVK 173 883 -19 8 1214 2725 74 24 13 chrX 82487138 82487521 -84162775 - L1_Mus3 LINE L1 0 6638 6252 8 1214 1036 257 34 55 chrX 82488119 82488556 -84161740 - Lx7 LINE L1 -1440 6256 5829 8 1214 277 318 82 10 chrX 82488607 82488801 -84161495 - L1ME3 LINE L1 -172 5990 5783 8 1214 295 273 140 0 chrX 82488805 82488913 -84161383 - B1F SINE Alu -8 141 17 8 1214 307 195 57 11 chrX 82488952 82489040 -84161256 - Lx7 LINE L1 0 7696 7605 8 1214 1091 186 17 17 chrX 82489155 82489395 -84160901 - Lx7 LINE L1 -282 7414 7175 8 1214 378 302 76 32 chrX 82489413 82489598 -84160698 - RMER2 LTR ERV1 -4 563 371 8 1214 1038 274 44 29 chrX 82489854 82489983 -84160313 - L1MA6 LINE L1 -23 6277 6148 8 1214 294 330 9 0 chrX 82489983 82490092 -84160204 + PB1D7 SINE Alu 1 110 -10 8 1214 1038 274 44 29 chrX 82490092 82490416 -84159880 - L1MA6 LINE L1 -153 6147 5817 8 1214 311 269 75 0 chrX 82490438 82490505 -84159791 - ID4 SINE ID 0 83 12 8 1214 348 297 20 105 chrX 82490669 82490917 -84159379 - L1M5 LINE L1 -342 5822 5596 8 1214 984 143 89 0 chrX 82491236 82491404 -84158892 + Lx3C LINE L1 6660 6842 -134 8 1214 423 132 0 0 chrX 82491739 82491807 -84158489 + (TA)n Simple_repeat Simple_repeat 2 69 0 8 1214 5334 157 61 2 chrX 82491904 82492939 -84157357 - Lx3C LINE L1 -64 6912 5817 8 1214 1149 75 52 6 chrX 82492951 82493124 -84157172 + L1_Mus4 LINE L1 5647 5827 -809 8 1214 1463 171 47 79 chrX 82493127 82493508 -84156788 - Lx5 LINE L1 -4 7046 6678 8 1214 1011 199 39 19 chrX 82494285 82494414 -84155882 + MTC LTR MaLR 3 130 -291 8 1214 2908 141 116 4 chrX 82494414 82494940 -84155356 - RMER4B LTR ERVK 0 585 1 8 1214 1011 199 39 19 chrX 82494940 82495015 -84155281 + MTC LTR MaLR 131 211 -210 8 1214 1605 215 88 16 chrX 82495061 82495549 -84154747 + L1Md_F LINE L1 54 576 -5943 8 1214 18878 134 44 18 chrX 82495558 82499619 -84150677 + L1Md_F LINE L1 99 4183 -1700 8 1214 365 358 60 65 chrX 82500250 82500435 -84149861 + MamSINE1 SINE tRNA 39 222 -68 1 1214 670 85 0 28 chrX 82501357 82501466 -84148830 + (TTCC)n Simple_repeat Simple_repeat 1 106 0 2 1214 369 292 85 80 chrX 82501536 82501732 -84148564 - MLT1F LTR MaLR -177 418 170 3 1214 353 303 52 15 chrX 82501856 82501990 -84148306 + B1F1 SINE Alu 4 142 -7 4 1214 1365 201 21 36 chrX 82503975 82504192 -84146104 - MTD-int LTR MaLR -812 446 150 5 1214 2081 161 55 50 chrX 82504192 82504611 -84145685 - MTC LTR MaLR 0 421 1 6 1214 1365 199 24 42 chrX 82504611 82504754 -84145542 - MTD-int LTR MaLR -1109 149 3 5 1214 1579 199 121 30 chrX 82504769 82504845 -84145451 - MTD LTR MaLR -13 406 332 5 1214 2877 94 5 73 chrX 82504845 82505282 -84145014 + MTB_Mm LTR MaLR 1 407 0 7 1214 1579 199 121 30 chrX 82505282 82505568 -84144728 - MTD LTR MaLR -88 331 12 5 1214 5677 85 72 5 chrX 82505568 82506406 -84143890 + Lx3_Mus LINE L1 6104 6997 -12 8 1214 269 372 115 16 chrX 82506522 82506713 -84143583 - LTR33 LTR ERVL -305 210 1 9 1214 799 191 142 125 chrX 82507739 82507855 -84142441 - LTR37A LTR ERV1 0 426 304 1 1214 301 339 18 9 chrX 82507855 82507968 -84142328 + PB1D10 SINE Alu 3 116 -1 1 1214 799 191 142 125 chrX 82507968 82508251 -84142045 - LTR37A LTR ERV1 -123 303 20 1 1214 239 193 54 18 chrX 82508478 82508589 -84141707 + (TA)n Simple_repeat Simple_repeat 1 115 0 1 1214 622 293 118 31 chrX 82508652 82509074 -84141222 + L1MB5 LINE L1 4492 4950 -1196 1 1214 237 227 0 0 chrX 82509119 82509163 -84141133 + B3A SINE B2 64 107 -91 1 1214 471 18 0 0 chrX 82509167 82509223 -84141073 + (TAGA)n Simple_repeat Simple_repeat 4 59 0 1 1214 4770 94 19 1 chrX 82509227 82509896 -84140400 - Lx3C LINE L1 -7 6969 6289 1 1214 3092 104 21 16 chrX 82509896 82510411 -84139885 + L1_Mur1 LINE L1 5008 5525 -361 1 1214 379 272 12 0 chrX 82510411 82510492 -84139804 + B3A SINE B2 93 174 -24 1 1214 231 263 0 17 chrX 82510619 82510677 -84139619 + L1MB5 LINE L1 5037 5093 -1053 1 1214 6193 124 22 14 chrX 82510688 82511713 -84138583 - Lx LINE L1 0 6654 5621 1 1214 765 79 31 23 chrX 82511713 82511843 -84138453 + L1Md_F2 LINE L1 6438 6568 -14 1 1214 900 251 87 17 chrX 82511845 82512477 -84137819 + L1MB5 LINE L1 5109 5797 -381 1 1214 264 333 38 0 chrX 82512518 82512650 -84137646 + L1MB5 LINE L1 5923 6059 -115 1 1214 626 294 6 91 chrX 82512692 82513021 -84137275 + L1MA4 LINE L1 5481 5781 -516 2 1214 1807 155 86 11 chrX 82513024 82513383 -84136913 + Lx4B LINE L1 6659 7044 -14 2 1214 432 37 0 0 chrX 82513383 82513437 -84136859 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 2 1214 432 253 91 16 chrX 82513458 82513678 -84136618 + L1MA4 LINE L1 5773 6010 -281 2 1214 350 229 23 35 chrX 82513797 82513883 -84136413 - PB1D10 SINE Alu -15 102 18 2 1214 454 326 38 8 chrX 82514052 82514185 -84136111 - B3A SINE B2 -61 137 1 2 1214 29 47 0 0 chrX 82514196 82514239 -84136057 + AT_rich Low_complexity Low_complexity 1 43 0 2 1214 332 255 94 75 chrX 82514239 82514345 -84135951 - RSINE1 SINE B4 0 165 58 2 1214 453 324 43 7 chrX 82515963 82516103 -84134193 - B3A SINE B2 -53 145 1 2 1214 265 158 0 0 chrX 82516191 82516248 -84134048 + RCHARR1 DNA MER1_type 813 869 -105 2 1214 842 119 268 11 chrX 82516259 82516438 -84133858 + URR1A DNA MER1_type 2 226 0 2 1214 198 0 0 0 chrX 82517567 82517589 -84132707 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1214 183 129 0 0 chrX 82517668 82517699 -84132597 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1214 13636 16 0 0 chrX 82518419 82520815 -84129481 - L1Md_T LINE L1 0 6582 4214 3 1214 23 33 0 0 chrX 82521101 82521131 -84129165 + AT_rich Low_complexity Low_complexity 1 30 0 3 1214 1231 127 9 31 chrX 82521702 82521930 -84128366 - Lx2 LINE L1 0 6997 6775 3 1214 4019 124 9 3 chrX 82521930 82522579 -84127717 - Lx2 LINE L1 -354 6643 5991 3 1214 5880 98 39 2 chrX 82522575 82523526 -84126770 - L1VL4 LINE L1 -581 2978 1993 3 1214 7030 77 17 0 chrX 82523536 82524744 -84125552 - L1_Mus1 LINE L1 0 6567 5340 3 1214 617 97 0 0 chrX 82524742 82524835 -84125461 + L1_Mus1 LINE L1 5158 5250 -633 3 1214 7654 76 10 9 chrX 82524833 82525137 -84125159 - L1VL4 LINE L1 -1553 2006 1696 3 1214 207 0 0 0 chrX 82525137 82525160 -84125136 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1214 7654 83 8 12 chrX 82525160 82526674 -84123622 - L1VL4 LINE L1 -1864 1695 191 3 1214 320 300 108 114 chrX 82526676 82527037 -84123259 + Kanga1d DNA Tc2 222 580 -29 3 1214 242 315 41 0 chrX 82527521 82527594 -84122702 - B4A SINE B4 0 292 217 3 1214 225 0 0 0 chrX 82527639 82527664 -84122632 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 4 1214 5793 109 26 16 chrX 82527664 82528604 -84121692 - Lx3_Mus LINE L1 -23 6986 6051 4 1214 288 0 0 0 chrX 82528604 82528636 -84121660 + (TCCC)n Simple_repeat Simple_repeat 1 32 0 4 1214 5793 109 26 16 chrX 82528636 82528677 -84121619 - Lx3_Mus LINE L1 -959 6050 5997 4 1214 908 233 121 26 chrX 82528683 82529031 -84121265 - Lx9 LINE L1 0 7644 7264 4 1214 460 317 153 15 chrX 82529033 82529235 -84121061 - B4A SINE B4 -62 230 1 3 1214 913 290 87 39 chrX 82529257 82529821 -84120475 - L1MD3 LINE L1 -80 7915 7325 4 1214 486 0 0 0 chrX 82529860 82529914 -84120382 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 1214 311 319 21 7 chrX 82530259 82530404 -84119892 + Lx8 LINE L1 6915 7061 -412 4 1214 566 278 123 14 chrX 82530401 82530766 -84119530 + Lx9 LINE L1 7225 7629 -15 4 1214 452 210 96 8 chrX 82530787 82530912 -84119384 - L1MD3 LINE L1 -1118 6877 6742 4 1214 310 275 149 22 chrX 82530932 82531066 -84119230 + Charlie8 DNA MER1_type 97 247 -2181 4 1214 2318 288 61 40 chrX 82531563 82532276 -84118020 + Lx8 LINE L1 6533 7253 -220 4 1214 945 141 53 21 chrX 82532276 82532465 -84117831 + B2_Mm2 SINE B2 1 195 0 5 1214 2318 288 61 40 chrX 82532465 82532673 -84117623 + Lx8 LINE L1 7254 7473 0 4 1214 22 70 0 0 chrX 82532700 82532743 -84117553 + AT_rich Low_complexity Low_complexity 1 43 0 5 1214 2836 125 36 21 chrX 82532836 82533310 -84116986 - Lx LINE L1 -2 6652 6172 5 1214 1076 88 0 0 chrX 82533429 82533566 -84116730 - B1_Mus2 SINE Alu -9 138 2 5 1214 329 0 0 24 chrX 82534212 82534254 -84116042 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 5 1214 221 315 12 99 chrX 82534470 82534551 -84115745 + ID2 SINE ID 1 74 -9 5 1214 2086 190 38 10 chrX 82534909 82535308 -84114988 - MTD LTR MaLR -8 411 2 5 1214 3360 244 87 25 chrX 82536477 82537863 -84112433 + RMER1A Other Other 74 1030 0 5 1214 21 0 0 0 chrX 82538665 82538686 -84111610 + AT_rich Low_complexity Low_complexity 1 21 0 5 1214 962 354 126 43 chrX 82539912 82540802 -84109494 + L2 LINE L2 153 1116 -2303 5 1214 607 281 25 6 chrX 82540869 82541030 -84109266 - RSINE1 SINE B4 0 165 2 6 1214 271 18 0 82 chrX 82541038 82541099 -84109197 + (TTCC)n Simple_repeat Simple_repeat 2 57 0 6 1214 257 293 195 0 chrX 82541103 82541226 -84109070 + L2a LINE L2 3278 3424 -2 6 1214 284 205 0 170 chrX 82541331 82541361 -84108935 - ID2 SINE ID 0 83 1 6 1214 315 232 14 14 chrX 82541361 82541431 -84108865 - ID SINE ID -154 70 1 6 1214 7371 65 10 2 chrX 82541447 82542776 -84107520 - L1Md_F2 LINE L1 0 6582 5249 6 1214 267 103 0 0 chrX 82542776 82542815 -84107481 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 1214 6157 69 14 3 chrX 82542815 82543031 -84107265 - L1Md_F2 LINE L1 -635 5248 5022 6 1214 292 323 23 19 chrX 82543031 82543146 -84107150 - PB1D10 SINE Alu -21 129 7 6 1214 278 304 11 21 chrX 82543075 82543169 -84107127 - ID_B1 SINE B4 -67 157 65 6 1214 347 252 0 36 chrX 82543443 82543583 -84106713 - Lx9 LINE L1 -16 7628 7494 6 1214 290 178 0 27 chrX 82545273 82545348 -84104948 + Lx7 LINE L1 7624 7696 0 7 1214 359 203 14 0 chrX 82545650 82545719 -84104577 + ID4_ SINE ID 3 72 -11 7 1214 4767 232 74 20 chrX 82545831 82547050 -84103246 + Lx6 LINE L1 6162 7445 -15 7 1214 969 316 19 8 chrX 82547246 82547514 -84102782 + B4A SINE B4 1 271 -21 7 1214 213 94 0 0 chrX 82547531 82547563 -84102733 + (TCTCTG)n Simple_repeat Simple_repeat 2 33 0 7 1214 186 43 0 0 chrX 82547564 82547587 -84102709 + (CCTG)n Simple_repeat Simple_repeat 2 24 0 7 1214 198 0 0 0 chrX 82547720 82547742 -84102554 + (T)n Simple_repeat Simple_repeat 1 22 0 7 1214 314 359 24 82 chrX 82548379 82548634 -84101662 + Lx8 LINE L1 7033 7272 -201 7 1214 510 192 10 0 chrX 82548850 82548954 -84101342 - B1_Mur2 SINE Alu -40 109 5 7 1214 320 292 50 8 chrX 82548954 82548971 -84101325 - B4 SINE B4 -94 198 73 7 1214 503 223 128 0 chrX 82549202 82549390 -84100906 - L1MA5A LINE L1 -395 5902 5691 8 1214 453 312 45 66 chrX 82549669 82549957 -84100339 - B4A SINE B4 -10 282 1 8 1214 405 58 0 0 chrX 82549964 82550016 -84100280 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 1214 439 145 96 0 chrX 82550478 82550561 -84099735 - RMER20A LTR ERVK -188 328 238 8 1214 1181 266 60 6 chrX 82550763 82551077 -84099219 + MTE2b LTR MaLR 35 365 -14 8 1214 919 316 44 12 chrX 82551141 82551391 -84098905 - B4A SINE B4 -34 258 1 8 1214 500 242 88 8 chrX 82551475 82551552 -84098744 - B1_Mur1 SINE Alu -5 144 67 8 1214 576 0 0 0 chrX 82551552 82551616 -84098680 + (TA)n Simple_repeat Simple_repeat 2 65 0 8 1214 500 242 88 8 chrX 82551616 82551663 -84098633 - B1_Mur1 SINE Alu -83 66 10 8 1214 1999 246 61 46 chrX 82551678 82552132 -84098164 - L1MA5A LINE L1 -820 5323 4842 8 1214 717 168 0 106 chrX 82552132 82552292 -84098004 + B1_Mus1 SINE Alu 5 147 -1 8 1214 1999 246 61 46 chrX 82552292 82552401 -84097895 - L1MA5A LINE L1 -1302 4841 4748 8 1214 245 51 0 25 chrX 82552401 82552441 -84097855 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 8 1214 1167 51 0 0 chrX 82552441 82552579 -84097717 - B1_Mus1 SINE Alu -9 139 2 9 1214 1999 246 61 46 chrX 82552579 82552843 -84097453 - L1MA5A LINE L1 -1396 4747 4482 8 1214 322 304 43 0 chrX 82552928 82553020 -84097276 - PB1D9 SINE Alu -8 112 17 9 1214 38 75 0 0 chrX 82553083 82553163 -84097133 + AT_rich Low_complexity Low_complexity 1 80 0 9 1214 1191 47 0 13 chrX 82553228 82553378 -84096918 - B1_Mus1 SINE Alu 0 148 1 9 1214 708 191 67 6 chrX 82553378 82553557 -84096739 - L1MA5A LINE L1 -1831 4312 4123 8 1214 603 0 0 0 chrX 82554033 82554100 -84096196 + (GGA)n Simple_repeat Simple_repeat 3 69 0 9 1214 205 299 182 35 chrX 82554790 82554960 -84095336 + L3 LINE CR1 4056 4250 -239 9 1214 342 0 0 0 chrX 82556315 82556353 -84093943 + (TA)n Simple_repeat Simple_repeat 2 39 0 9 1214 1224 48 0 0 chrX 82556741 82556887 -84093409 - B1_Mus1 SINE Alu -1 147 2 9 1214 300 317 0 12 chrX 82557054 82557137 -84093159 - ID4 SINE ID 0 83 2 9 1214 1062 288 41 35 chrX 82557267 82557612 -84092684 + MTE2b LTR MaLR 5 351 -28 9 1214 2221 321 28 14 chrX 82557831 82558725 -84091571 - Lx8 LINE L1 -231 7242 6337 1 1214 231 259 19 0 chrX 82559918 82559972 -84090324 + MTE2b LTR MaLR 323 377 -2 9 1214 26 0 0 0 chrX 82560010 82560036 -84090260 + AT_rich Low_complexity Low_complexity 1 26 0 1 1214 261 0 0 0 chrX 82560171 82560200 -84090096 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 1214 631 302 7 13 chrX 82560225 82560376 -84089920 - B4A SINE B4 0 292 143 1 1214 377 351 104 4 chrX 82560486 82560746 -84089550 - L1MD2 LINE L1 -12 6347 6062 1 1214 3436 251 81 27 chrX 82560748 82561838 -84088458 - RMER1A Other Other -7 1023 22 1 1214 2765 19 75 0 chrX 82561838 82562160 -84088136 + ORR1A0 LTR MaLR 1 346 0 1 1214 1528 239 63 70 chrX 82562160 82562304 -84087992 - RMER1B Other Other -891 175 40 1 1214 476 199 111 65 chrX 82562496 82562695 -84087601 + Lx7 LINE L1 7486 7693 -3 1 1214 1849 206 42 9 chrX 82563000 82563427 -84086869 + Lx4B LINE L1 5947 6387 -671 1 1214 319 236 63 3 chrX 82563473 82563577 -84086719 - PB1D10 SINE Alu -1 119 9 1 1214 193 146 0 40 chrX 82564403 82564453 -84085843 + GA-rich Low_complexity Low_complexity 4 51 0 1 1214 246 316 45 28 chrX 82565610 82565759 -84084537 - MIR SINE MIR -22 246 92 1 1214 1092 111 51 23 chrX 82566166 82566341 -84083955 + B2_Mm2 SINE B2 2 181 -14 1 1214 1067 74 161 0 chrX 82566356 82566518 -84083778 + B2_Mm2 SINE B2 2 189 -6 1 1214 306 0 0 0 chrX 82568066 82568100 -84082196 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1214 312 265 15 0 chrX 82569141 82569209 -84081087 + BC1_Mm scRNA scRNA 15 83 -69 1 1214 336 48 0 0 chrX 82569591 82569633 -84080663 + (TGGA)n Simple_repeat Simple_repeat 3 44 0 1 1214 293 239 14 14 chrX 82570294 82570366 -84079930 - ID4 SINE ID -9 74 3 1 1214 1051 226 42 25 chrX 82570483 82570647 -84079649 + MTE2a LTR MaLR 135 304 -75 1 1214 180 0 0 0 chrX 82570647 82570667 -84079629 + (CCCA)n Simple_repeat Simple_repeat 1 20 0 1 1214 1051 226 42 25 chrX 82570667 82570742 -84079554 + MTE2a LTR MaLR 305 378 -1 1 1214 3085 82 5 15 chrX 82571158 82571569 -84078727 - MTB_Mm LTR MaLR 0 407 1 1 1214 6295 116 21 80 chrX 82571571 82572736 -84077560 - MTB_Mm-int LTR MaLR -2 1096 1 1 1214 2886 72 40 18 chrX 82572736 82573134 -84077162 - MTB_Mm LTR MaLR 0 407 1 1 1214 679 286 7 14 chrX 82574235 82574377 -84075919 - RSINE1 SINE B4 0 165 25 1 1214 4864 162 16 60 chrX 82574688 82575101 -84075195 - RMER19B LTR ERVK -2 900 487 1 1214 1057 52 67 0 chrX 82575101 82575236 -84075060 + B1_Mus1 SINE Alu 1 144 -4 1 151 4864 162 16 60 chrX 82575236 82575763 -84074533 - RMER19B LTR ERVK -416 486 1 1 1215 604 284 158 16 chrX 82575774 82576021 -84074275 + LTR16A1 LTR ERVL 160 441 -15 1 1215 521 313 103 97 chrX 82576508 82576858 -84073438 - MLT1A1 LTR MaLR -4 404 53 1 1215 405 0 0 0 chrX 82577029 82577074 -84073222 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 1215 215 227 77 39 chrX 82577290 82577368 -84072928 + ID4 SINE ID 2 82 -1 1 1215 2794 260 110 8 chrX 82577650 82578192 -84072104 + Lx6 LINE L1 6495 7120 -340 1 1215 522 113 0 0 chrX 82578192 82578289 -84072007 + (TG)n Simple_repeat Simple_repeat 2 98 0 1 1215 2794 260 110 8 chrX 82578289 82578599 -84071697 + Lx6 LINE L1 7121 7433 -27 1 1215 182 120 0 0 chrX 82579201 82579226 -84071070 + MIRb SINE MIR 155 179 -89 1 1215 348 320 10 0 chrX 82579309 82579406 -84070890 + MER5A DNA MER1_type 92 189 0 1 1215 1911 159 20 17 chrX 82579552 82579910 -84070386 - RLTR15 LTR ERVK 0 359 1 1 1215 250 325 0 0 chrX 82580889 82580969 -84069327 + CT-rich Low_complexity Low_complexity 2 81 0 1 1215 478 245 0 0 chrX 82580971 82581069 -84069227 - ID_B1 SINE B4 -6 218 121 1 1215 2210 132 49 14 chrX 82581203 82581571 -84068725 + Lx LINE L1 6267 6647 -7 1 1215 1100 79 0 0 chrX 82581641 82581780 -84068516 - B1_Mus1 SINE Alu -8 140 2 1 1215 1099 82 0 0 chrX 82581799 82581934 -84068362 - B1_Mus2 SINE Alu -11 136 2 1 1215 310 264 131 49 chrX 82582635 82582818 -84067478 + L1M5 LINE L1 4164 4361 -1785 1 1215 644 255 6 65 chrX 82582843 82583011 -84067285 - RSINE1 SINE B4 -4 161 4 1 1215 394 202 0 0 chrX 82583056 82583145 -84067151 - Lx9 LINE L1 -7 7637 7549 1 1215 21 57 0 0 chrX 82583162 82583197 -84067099 + AT_rich Low_complexity Low_complexity 1 35 0 1 1215 342 281 37 0 chrX 82583364 82583499 -84066797 + L1M5 LINE L1 5366 5505 -735 1 1215 563 223 50 45 chrX 82583943 82584041 -84066255 + L1MA6 LINE L1 6089 6186 -114 1 1215 375 313 9 0 chrX 82584041 82584156 -84066140 + PB1D10 SINE Alu 1 116 -1 1 1215 563 223 50 45 chrX 82584156 82584259 -84066037 + L1MA6 LINE L1 6187 6291 -9 1 1215 1102 316 19 93 chrX 82584664 82585359 -84064937 - Lx8 LINE L1 -127 7346 6704 1 1215 3066 157 36 8 chrX 82585498 82586032 -84064264 - Lx4B LINE L1 -11 7047 6499 1 1215 3423 155 84 2 chrX 82586045 82586690 -84063606 - Lx4B LINE L1 -289 6769 6072 1 1215 3707 73 45 0 chrX 82586681 82587242 -84063054 + MusHAL1 LINE L1 1785 2370 -342 1 1215 868 255 29 11 chrX 82587244 82587458 -84062838 - B3 SINE B2 0 216 1 1 1215 297 0 0 0 chrX 82587459 82587492 -84062804 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 1 1215 502 262 0 0 chrX 82587492 82587595 -84062701 - B1F2 SINE Alu -13 136 34 1 1215 237 65 0 0 chrX 82588137 82588168 -84062128 + (TTA)n Simple_repeat Simple_repeat 3 33 0 1 1215 252 185 24 12 chrX 82588384 82588397 -84061899 + (TA)n Simple_repeat Simple_repeat 1 13 0 1 1215 291 93 0 0 chrX 82588397 82588440 -84061856 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1215 252 185 24 12 chrX 82588440 82588508 -84061788 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 1215 270 194 0 0 chrX 82589334 82589396 -84060900 + A-rich Low_complexity Low_complexity 1 62 0 1 1215 715 336 41 52 chrX 82589590 82589935 -84060361 - MLT1A LTR MaLR -5 369 29 1 1215 4227 122 27 57 chrX 82589938 82590505 -84059791 + L1VL4 LINE L1 191 744 -5558 1 1215 5820 70 26 3 chrX 82590505 82591273 -84059023 + L1_Mus1 LINE L1 5782 6567 0 1 1215 4227 122 27 57 chrX 82591273 82591473 -84058823 + L1VL4 LINE L1 745 935 -5367 1 1215 4709 12 0 0 chrX 82591456 82592017 -84058279 + L1Md_T LINE L1 5026 5586 -297 1 1215 8440 33 1 0 chrX 82592017 82593011 -84057285 + L1Md_T LINE L1 5587 6581 -1 1 1215 5825 81 12 0 chrX 82593058 82593951 -84056345 + MusHAL1 LINE L1 55 958 -1754 1 1215 6689 138 1 3 chrX 82593949 82595304 -84054992 + Lx LINE L1 5276 6627 -27 1 1215 238 200 31 0 chrX 82595341 82595406 -84054890 + L1MC4a LINE L1 7544 7610 -272 1 1215 369 122 0 0 chrX 82595714 82595788 -84054508 + (TC)n Simple_repeat Simple_repeat 1 74 0 1 1215 387 0 0 0 chrX 82595789 82595832 -84054464 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1215 496 66 5 0 chrX 82595954 82596031 -84054265 + L1Md_F2 LINE L1 6490 6569 -13 1 1215 360 0 0 0 chrX 82596069 82596109 -84054187 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1 1215 6901 111 4 20 chrX 82596137 82597315 -84052981 + L1VL1 LINE L1 25 1181 -2517 1 1215 13035 72 7 28 chrX 82597315 82599263 -84051033 - L1_Mm LINE L1 -571 5312 3407 1 1215 6526 68 2 8 chrX 82599254 82600632 -84049664 - L1Md_F2 LINE L1 -110 6472 5104 1 1215 4709 150 102 20 chrX 82600632 82601003 -84049293 - L1_Mur2 LINE L1 -1268 4609 4169 1 1215 461 58 83 0 chrX 82601003 82601123 -84049173 + (TA)n Simple_repeat Simple_repeat 2 131 0 1 1215 4709 150 102 20 chrX 82601123 82601408 -84048888 - L1_Mur2 LINE L1 -1709 4168 3857 1 1215 1995 181 31 3 chrX 82601408 82601791 -84048505 + ORR1B1 LTR MaLR 1 394 0 1 1215 4709 150 102 20 chrX 82601791 82602175 -84048121 - L1_Mur2 LINE L1 -2021 3856 3483 1 1215 461 82 0 12 chrX 82602176 82602262 -84048034 - L1_Mus3 LINE L1 -3 6635 6551 1 1215 23 0 0 0 chrX 82602405 82602428 -84047868 + AT_rich Low_complexity Low_complexity 1 23 0 1 1215 748 280 35 0 chrX 82602437 82602637 -84047659 - B3 SINE B2 -8 208 2 1 1215 480 282 167 30 chrX 82603171 82603405 -84046891 + B4A SINE B4 5 270 -22 1 1215 306 0 0 0 chrX 82603421 82603455 -84046841 + (CCTA)n Simple_repeat Simple_repeat 1 34 0 1 1215 378 0 0 0 chrX 82603455 82603496 -84046800 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1215 253 302 16 0 chrX 82603697 82603760 -84046536 - PB1D10 SINE Alu -21 96 33 1 1215 207 0 0 0 chrX 82603932 82603955 -84046341 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 1215 387 0 0 0 chrX 82603955 82603997 -84046299 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1215 795 79 114 30 chrX 82604172 82604303 -84045993 + B2_Mm2 SINE B2 36 177 -18 1 1215 453 297 112 15 chrX 82604345 82604550 -84045746 + MLT1H2 LTR MaLR 245 469 -20 1 1215 215 344 0 0 chrX 82604904 82604965 -84045331 - ID4 SINE ID 0 83 23 1 1215 279 114 0 0 chrX 82605000 82605044 -84045252 + (CTTG)n Simple_repeat Simple_repeat 1 44 0 1 1215 701 280 14 24 chrX 82605201 82605413 -84044883 + B3 SINE B2 1 210 -6 1 1215 243 246 111 42 chrX 82605821 82605893 -84044403 + ID4 SINE ID 1 77 -6 1 1215 565 266 8 30 chrX 82606059 82606191 -84044105 - RSINE1 SINE B4 -34 131 3 1 1215 1136 217 126 14 chrX 82606243 82606537 -84043759 - ORR1D1 LTR MaLR -5 369 43 1 1215 351 302 58 0 chrX 82606642 82606728 -84043568 - RSINE1 SINE B4 -14 151 61 1 1215 470 281 154 7 chrX 82606772 82606908 -84043388 - MER74A LTR ERVL -3 555 400 1 1215 867 309 123 54 chrX 82606917 82607286 -84043010 + MTD LTR MaLR 10 407 0 1 1215 398 325 53 0 chrX 82607355 82607469 -84042827 - MER74A LTR ERVL -278 280 161 1 1215 202 189 0 0 chrX 82607723 82607760 -84042536 + CT-rich Low_complexity Low_complexity 3 39 0 1 1215 824 274 0 22 chrX 82607767 82607946 -84042350 - ID_B1 SINE B4 -49 175 1 1 1215 24 0 0 0 chrX 82608134 82608158 -84042138 + AT_rich Low_complexity Low_complexity 1 24 0 1 1215 1530 259 59 10 chrX 82608328 82608851 -84041445 - L1MB5 LINE L1 -96 6078 5530 1 1215 180 158 0 0 chrX 82608880 82608918 -84041378 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1215 748 324 0 24 chrX 82608995 82609248 -84041048 + Lx8 LINE L1 6881 7127 -346 1 1215 16472 87 11 14 chrX 82609258 82612212 -84038084 + L1VL4 LINE L1 193 3139 -420 1 1215 822 39 0 0 chrX 82612212 82612314 -84037982 + (GGAA)n Simple_repeat Simple_repeat 4 105 0 2 1215 11372 84 11 24 chrX 82612314 82612588 -84037708 + L1VL4 LINE L1 3140 3412 -147 1 1215 235 341 22 0 chrX 82612618 82612709 -84037587 + Lx8 LINE L1 7147 7239 -234 1 1215 668 244 175 15 chrX 82613001 82613275 -84037021 + Lx8 LINE L1 7147 7464 -9 2 1215 5261 89 45 4 chrX 82613346 82614207 -84036089 - Lx3A LINE L1 -1026 5955 5064 2 1215 6465 119 38 3 chrX 82614207 82615179 -84035117 + Lx3A LINE L1 5966 6971 -10 2 1215 204 67 0 0 chrX 82615180 82615210 -84035086 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 2 1215 368 377 88 13 chrX 82615237 82615476 -84034820 - L1ME2 LINE L1 -14 6150 5894 2 1215 1076 259 87 19 chrX 82615514 82615892 -84034404 - Lx8 LINE L1 -29 7444 7041 2 1215 293 269 81 48 chrX 82615898 82616109 -84034187 + Lx8 LINE L1 6753 7006 -467 2 1215 537 92 0 0 chrX 82616764 82616840 -84033456 + (TG)n Simple_repeat Simple_repeat 2 77 0 2 1215 7608 47 9 2 chrX 82617198 82618785 -84031511 - L1Md_F3 LINE L1 0 6584 4987 2 1215 8200 27 61 0 chrX 82618781 82620359 -84029937 - L1Md_T LINE L1 0 6582 4860 2 1215 472 290 128 46 chrX 82621137 82621574 -84028722 + L1ME3A LINE L1 5649 6121 -52 2 1215 27627 114 14 70 chrX 82621934 82623373 -84026923 + L1Md_F2 LINE L1 514 1744 -4139 2 1215 7155 72 23 3 chrX 82623373 82624338 -84025958 + L1Md_F2 LINE L1 5587 6570 -12 2 1215 525 16 0 0 chrX 82624345 82624407 -84025889 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1215 27627 71 3 106 chrX 82624407 82628533 -84021763 + L1Md_F2 LINE L1 1745 5585 -298 2 1215 7675 65 9 2 chrX 82628534 82629520 -84020776 + L1Md_F2 LINE L1 5587 6579 -3 2 1215 22 0 0 0 chrX 82629577 82629599 -84020697 + AT_rich Low_complexity Low_complexity 1 22 0 2 1215 592 248 59 0 chrX 82629600 82629753 -84020543 - RSINE1 SINE B4 0 165 4 2 1215 276 265 89 30 chrX 82630509 82630610 -84019686 + MLT1A0 LTR MaLR 1 107 -301 2 1215 343 297 87 15 chrX 82630661 82630808 -84019488 + MLT1A0 LTR MaLR 227 406 -2 2 1215 282 320 120 0 chrX 82630808 82630903 -84019393 - MER5A1 DNA MER1_type -54 112 6 2 1215 507 274 86 12 chrX 82631762 82632006 -84018290 - L1ME3A LINE L1 -13 6160 5899 2 1215 1559 172 149 6 chrX 82633184 82633505 -84016791 - ORR1B2 LTR MaLR 0 367 1 2 1215 227 342 67 17 chrX 82633512 82633631 -84016665 + MER5A1 DNA MER1_type 37 161 -5 2 1215 25 24 0 23 chrX 82633796 82633822 -84016474 + AT_rich Low_complexity Low_complexity 1 26 0 2 1215 1722 116 4 0 chrX 82633822 82634081 -84016215 + Lx2 LINE L1 6737 6996 -1 2 1215 25 24 0 23 chrX 82634081 82634097 -84016199 + AT_rich Low_complexity Low_complexity 1 16 0 2 1215 1533 304 31 13 chrX 82634245 82634794 -84015502 + Lx8 LINE L1 6690 7248 -225 2 1215 517 290 27 14 chrX 82634882 82635029 -84015267 + ID_B1 SINE B4 70 218 -6 2 1215 7112 74 5 2 chrX 82635244 82636265 -84014031 + L1_Mus1 LINE L1 5537 6560 -7 2 1215 412 283 24 25 chrX 82636342 82636495 -84013801 + B3 SINE B2 2 165 -30 2 1215 730 301 26 108 chrX 82636643 82636939 -84013357 - Lx8 LINE L1 -273 7200 6924 2 1215 333 68 0 0 chrX 82636939 82636983 -84013313 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1215 730 301 26 108 chrX 82636983 82637193 -84013103 - Lx8 LINE L1 -550 6923 6736 2 1215 455 289 155 55 chrX 82637322 82637651 -84012645 - L1M2 LINE L1 -852 5291 4930 2 1215 299 317 65 52 chrX 82638298 82638451 -84011845 - MLT1H2 LTR MaLR -15 474 320 2 1215 351 0 0 0 chrX 82638989 82639028 -84011268 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 1215 265 192 0 0 chrX 82639544 82639596 -84010700 + Lx3A LINE L1 5025 5076 -810 2 1215 9215 102 16 3 chrX 82639589 82641245 -84009051 + Lx3A LINE L1 5303 6975 -6 2 1215 21 0 0 0 chrX 82641246 82641267 -84009029 + AT_rich Low_complexity Low_complexity 1 21 0 2 1215 293 229 60 0 chrX 82641288 82641371 -84008925 + MER2 DNA MER2_type 92 179 -166 2 1215 30624 64 24 24 chrX 82641371 82645722 -84004574 + L1Md_A LINE L1 500 4930 -953 2 1215 225 294 31 61 chrX 82645722 82645820 -84004476 - RMER20A LTR ERVK -236 280 186 2 1215 30624 64 24 24 chrX 82645820 82646463 -84003833 + L1Md_A LINE L1 4931 5586 -297 2 1215 8087 46 1 3 chrX 82646463 82647458 -84002838 + L1Md_F2 LINE L1 5587 6579 -3 2 1215 26 0 0 0 chrX 82647461 82647487 -84002809 + AT_rich Low_complexity Low_complexity 1 26 0 2 1215 342 0 0 0 chrX 82650028 82650066 -84000230 + (TC)n Simple_repeat Simple_repeat 1 38 0 2 1215 605 279 56 38 chrX 82650555 82650715 -83999581 - B3 SINE B2 -53 163 1 2 1215 9333 82 7 1 chrX 82650799 82652125 -83998171 - Lx3_Mus LINE L1 0 7009 5677 2 1215 8668 78 8 25 chrX 82652117 82652389 -83997907 + L1_Mur1 LINE L1 4405 4666 -1220 2 1215 5552 48 68 3 chrX 82652389 82653097 -83997199 - L1Md_F2 LINE L1 -13 6569 5816 2 1215 8668 78 8 25 chrX 82653097 82654131 -83996165 + L1_Mur1 LINE L1 4667 5689 -197 2 1215 620 330 60 71 chrX 82654408 82654927 -83995369 + Charlie10 DNA MER1_type 53 565 -2257 2 1215 1471 258 7 7 chrX 82654944 82655370 -83994926 - L1_Mur3 LINE L1 -1911 3969 3544 2 1215 1738 312 12 8 chrX 82655374 82655831 -83994465 - Lx9 LINE L1 -637 7007 6549 2 1215 186 43 0 0 chrX 82655831 82655854 -83994442 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1215 1738 312 12 8 chrX 82655854 82655985 -83994311 - Lx9 LINE L1 -1096 6548 6418 2 1215 1410 257 22 16 chrX 82655986 82656306 -83993990 - MTE2b LTR MaLR -50 329 8 2 1215 2692 267 85 55 chrX 82656363 82657589 -83992707 + Charlie10 DNA MER1_type 964 2225 -597 2 1215 701 190 118 12 chrX 82657608 82657778 -83992518 + Lx4B LINE L1 6866 7053 -5 2 1215 361 297 72 173 chrX 82657803 82657836 -83992460 + Charlie10 DNA MER1_type 2216 2250 -572 2 1215 4768 86 68 1 chrX 82657836 82658513 -83991783 + Lx LINE L1 5929 6650 -4 2 1215 361 297 72 173 chrX 82658513 82658690 -83991606 + Charlie10 DNA MER1_type 2251 2397 -425 2 1215 293 344 11 0 chrX 82658690 82658783 -83991513 + PB1D10 SINE Alu 5 98 -19 2 1215 361 297 72 173 chrX 82658783 82659096 -83991200 + Charlie10 DNA MER1_type 2398 2687 -135 2 1215 256 49 82 47 chrX 82659156 82659241 -83991055 + T-rich Low_complexity Low_complexity 3 90 0 2 1215 1049 84 14 0 chrX 82659242 82659385 -83990911 - B1_Mm SINE Alu -1 146 2 2 1215 509 260 30 124 chrX 82659443 82659676 -83990620 - B3 SINE B2 -5 211 1 2 1215 197 254 57 43 chrX 82659699 82659769 -83990527 - MIRm SINE MIR 0 276 206 2 1215 1130 91 0 0 chrX 82659824 82659967 -83990329 - B1_Mus2 SINE Alu -3 144 2 2 1215 2624 272 49 24 chrX 82660039 82660889 -83989407 - Lx8 LINE L1 -28 7445 6574 2 1215 540 265 34 135 chrX 82660904 82661253 -83989043 + RMER10A LTR ERVL 12 325 -117 2 1215 424 354 85 25 chrX 82663161 82663396 -83986900 + MIR SINE MIR 8 256 -6 2 1215 415 302 75 86 chrX 82664635 82664809 -83985487 + MLT2F LTR ERVL 1 172 -457 2 1215 364 349 52 21 chrX 82665329 82665522 -83984774 + MLT2F LTR ERVL 421 619 -44 2 1215 510 196 0 0 chrX 82665526 82665633 -83984663 + (TA)n Simple_repeat Simple_repeat 2 108 0 2 1215 543 278 100 31 chrX 82666216 82666565 -83983731 + Lx7 LINE L1 7318 7690 -6 2 1215 6787 104 20 3 chrX 82667064 82668518 -83981778 - L1_Mus4 LINE L1 -434 6202 4724 2 1215 2964 110 14 5 chrX 82668518 82668964 -83981332 + L1_Mus4 LINE L1 6186 6635 -1 2 1215 517 353 164 40 chrX 82669264 82669660 -83980636 - L2a LINE L2 -1 3425 2981 2 1215 558 89 0 0 chrX 82669778 82669857 -83980439 + L1_Mus2 LINE L1 6487 6565 -1 2 1215 5756 199 80 6 chrX 82670400 82671784 -83978512 - Lx9 LINE L1 -10 7634 6149 2 1215 4028 48 0 0 chrX 82671872 82672353 -83977943 - L1_Mus1 LINE L1 -2 6565 6085 2 1215 441 54 0 0 chrX 82673370 82673426 -83976870 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1215 240 295 96 26 chrX 82674064 82674179 -83976117 - MLT1H LTR MaLR -390 159 37 2 1215 211 200 0 0 chrX 82674910 82674945 -83975351 + (TATG)n Simple_repeat Simple_repeat 4 38 0 2 1215 222 37 0 0 chrX 82674945 82674972 -83975324 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1215 822 249 57 0 chrX 82675240 82675449 -83974847 + ID_B1 SINE B4 1 221 -3 2 1215 207 0 0 0 chrX 82675869 82675892 -83974404 + (T)n Simple_repeat Simple_repeat 1 23 0 2 1215 2140 83 7 7 chrX 82676089 82676393 -83973903 - L1_Mus1 LINE L1 0 6567 6264 2 1215 995 289 97 3 chrX 82676688 82677028 -83973268 + Lx8 LINE L1 7047 7418 -55 2 1215 315 0 0 0 chrX 82677043 82677078 -83973218 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1215 3462 18 8 0 chrX 82678914 82679307 -83970989 - MTA_Mm LTR MaLR 0 396 1 2 1215 1770 267 83 26 chrX 82679761 82680376 -83969920 - Lx8 LINE L1 -3 7470 6821 2 1215 758 243 11 5 chrX 82680368 82680554 -83969742 + Lx8 LINE L1 6343 6529 -944 2 1215 790 289 39 18 chrX 82680550 82680926 -83969370 - Lx7 LINE L1 -1968 5728 5343 2 1215 3516 256 75 46 chrX 82680998 82682268 -83968028 - Lx8 LINE L1 -788 6856 5349 2 1215 1448 208 136 13 chrX 82682268 82682643 -83967653 - MTC LTR MaLR 0 421 1 2 1215 3516 208 60 47 chrX 82682643 82682887 -83967409 - Lx8 LINE L1 -499 5348 5086 2 1215 1951 110 9 36 chrX 82682887 82683216 -83967080 - Lx LINE L1 -6 6648 6329 2 1215 3516 208 60 47 chrX 82683216 82683506 -83966790 - Lx8 LINE L1 -762 5085 4801 2 1215 297 276 64 73 chrX 82683555 82683774 -83966522 + L1M2 LINE L1 4852 5068 -1075 2 1215 1066 66 40 0 chrX 82684261 82684413 -83965883 + L1Md_F2 LINE L1 6425 6582 0 2 1215 21 0 0 0 chrX 82684428 82684449 -83965847 + AT_rich Low_complexity Low_complexity 1 21 0 2 1215 23 0 0 0 chrX 82685332 82685355 -83964941 + AT_rich Low_complexity Low_complexity 1 23 0 2 1215 193 361 40 20 chrX 82685525 82685624 -83964672 - L2 LINE L2 -830 2589 2489 2 1215 393 368 0 0 chrX 82685669 82685802 -83964494 + MLT1H2 LTR MaLR 55 187 -302 2 1215 3095 145 22 0 chrX 82686012 82686510 -83963786 - Lx LINE L1 -5 6649 6141 2 1215 368 177 44 9 chrX 82686546 82686660 -83963636 + Lx9 LINE L1 7520 7637 -7 2 1215 2115 188 40 7 chrX 82686832 82687235 -83963061 - MTC LTR MaLR -5 416 1 2 1215 378 360 89 21 chrX 82687680 82687870 -83962426 + LTR33 LTR ERVL 1 203 -312 2 1215 396 0 0 0 chrX 82688434 82688478 -83961818 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1215 419 362 59 34 chrX 82688699 82689194 -83961102 + ERVL-E-int LTR ERVL 2327 2833 -2834 2 1215 1658 190 50 18 chrX 82690308 82690651 -83959645 - Lx5 LINE L1 0 7050 6697 2 1215 4138 164 81 6 chrX 82690649 82691454 -83958842 - Lx5 LINE L1 -484 6566 5702 2 1215 287 370 132 6 chrX 82691821 82692003 -83958293 - MIR SINE MIR -21 241 37 2 1215 308 366 156 53 chrX 82692081 82692537 -83957759 + LTR16D LTR ERVL 144 646 -29 2 1215 374 0 22 0 chrX 82692640 82692686 -83957610 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 2 1215 4077 117 2 0 chrX 82692812 82693394 -83956902 + Lx LINE L1 6065 6647 -7 2 1215 582 309 112 49 chrX 82693550 82693836 -83956460 + ORR1E LTR MaLR 51 354 -5 3 1215 3938 227 40 68 chrX 82694616 82696145 -83954151 + RMER1A Other Other 1 1030 0 3 1215 538 148 27 98 chrX 82696223 82696392 -83953904 - B2_Mm2 SINE B2 -33 160 1 3 1215 410 266 131 93 chrX 82696869 82697105 -83953191 - MLT1L LTR MaLR -2 608 364 3 1215 26 50 0 0 chrX 82697261 82697301 -83952995 + AT_rich Low_complexity Low_complexity 1 40 0 3 1215 273 298 67 42 chrX 82697323 82697442 -83952854 - B1F2 SINE Alu 0 149 28 3 1215 312 319 109 25 chrX 82697336 82697455 -83952841 - ID_B1 SINE B4 -9 215 87 3 1215 767 61 0 0 chrX 82697499 82697597 -83952699 + BGLII_Mus LTR ERVK 325 422 0 3 1215 663 208 15 39 chrX 82697974 82698179 -83952117 + RMER3D-int LTR ERVK 652 851 -1991 3 1215 585 162 43 0 chrX 82698312 82698429 -83951867 + RMER3D-int LTR ERVK 489 610 -2232 3 1215 6523 185 73 56 chrX 82698450 82700248 -83950048 + RMER3D-int LTR ERVK 1014 2842 0 3 1215 2417 62 198 3 chrX 82700248 82700439 -83949857 + BGLII_Mus LTR ERVK 1 220 -202 3 1215 594 41 0 0 chrX 82700439 82700512 -83949784 + (GA)n Simple_repeat Simple_repeat 1 73 0 3 1215 2417 62 198 3 chrX 82700512 82700673 -83949623 + BGLII_Mus LTR ERVK 221 422 0 3 1215 3046 108 29 20 chrX 82700676 82701167 -83949129 - Lx LINE L1 -31 6623 6129 3 1215 229 310 0 0 chrX 82701167 82701225 -83949071 + MIR3 SINE MIR 128 185 -23 3 1215 1720 296 84 21 chrX 82701344 82701584 -83948712 - Lx8 LINE L1 -124 7349 7073 3 1215 181 57 0 54 chrX 82701584 82701621 -83948675 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 1215 1720 296 84 21 chrX 82701621 82702130 -83948166 - Lx8 LINE L1 -401 7072 6553 3 1215 13162 121 9 18 chrX 82702536 82705192 -83945104 + L1VL4 LINE L1 499 3130 -429 3 1215 291 91 0 0 chrX 82705191 82705235 -83945061 + L1_Mm LINE L1 5205 5248 -635 3 1215 3016 156 9 22 chrX 82705315 82705612 -83944684 + L1_Mm LINE L1 5205 5503 -380 3 1215 2998 57 23 3 chrX 82705612 82706000 -83944296 - MTA_Mm LTR MaLR 0 396 1 3 1215 3016 156 9 22 chrX 82706000 82706279 -83944017 + L1_Mm LINE L1 5504 5773 -110 3 1216 202 335 156 34 chrX 82706509 82706688 -83943608 - MIRb SINE MIR -18 250 50 3 1216 525 304 92 10 chrX 82706770 82706966 -83943330 + ID_B1 SINE B4 3 214 -10 3 1216 324 0 0 0 chrX 82707370 82707406 -83942890 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1216 189 97 83 0 chrX 82707612 82707684 -83942612 + (TA)n Simple_repeat Simple_repeat 1 78 0 3 1216 26 0 0 0 chrX 82707728 82707754 -83942542 + AT_rich Low_complexity Low_complexity 1 26 0 3 1216 668 246 0 0 chrX 82707782 82707912 -83942384 - MTEa LTR MaLR -249 130 1 3 1216 21 0 0 0 chrX 82708121 82708142 -83942154 + AT_rich Low_complexity Low_complexity 1 21 0 3 1216 327 347 186 5 chrX 82708174 82708368 -83941928 + HAL1 LINE L1 427 655 -1852 3 1216 1914 89 3 24 chrX 82708447 82708736 -83941560 - L1Md_F2 LINE L1 -1 6581 6299 3 1216 6104 96 21 12 chrX 82708736 82710455 -83939841 - L1Md_F LINE L1 -3758 2125 389 3 1216 271 272 0 11 chrX 82710487 82710580 -83939716 + HAL1 LINE L1 1368 1459 -1048 3 1216 2625 280 85 55 chrX 82710611 82710729 -83939567 - Charlie1a DNA MER1_type -9 1446 1329 3 1216 934 229 5 23 chrX 82710729 82710948 -83939348 + B3 SINE B2 2 216 0 3 1216 2625 280 85 55 chrX 82710948 82711369 -83938927 - Charlie1a DNA MER1_type -127 1328 896 3 1216 254 372 0 9 chrX 82711369 82711483 -83938813 + PB1D10 SINE Alu 3 115 -2 3 1216 2625 280 85 55 chrX 82711483 82712314 -83937982 - Charlie1a DNA MER1_type -560 895 33 3 1216 1074 239 52 41 chrX 82712471 82712741 -83937555 + ORR1D2 LTR MaLR 3 275 -95 3 1216 4029 211 67 11 chrX 82712747 82713715 -83936581 - Lx9 LINE L1 -6 7638 6617 3 1216 513 219 0 9 chrX 82713719 82713825 -83936471 + ORR1D2 LTR MaLR 266 370 0 3 1216 7508 88 18 2 chrX 82713836 82714843 -83935453 + RLTR13D5 LTR ERVK 1 1023 0 3 1216 3346 269 94 25 chrX 82714845 82715446 -83934850 + Lx8 LINE L1 6109 6748 -725 3 1216 443 87 14 0 chrX 82715446 82715515 -83934781 + (TCTA)n Simple_repeat Simple_repeat 2 71 0 3 1216 3346 269 94 25 chrX 82715515 82715940 -83934356 + Lx8 LINE L1 6749 7202 -271 3 1216 699 35 0 0 chrX 82715940 82716026 -83934270 + (GA)n Simple_repeat Simple_repeat 1 86 0 3 1216 3346 269 94 25 chrX 82716026 82716184 -83934112 + Lx8 LINE L1 7203 7373 -100 3 1216 287 289 0 99 chrX 82716252 82716394 -83933902 - L1MD3 LINE L1 -24 7858 7731 3 1216 1335 229 54 59 chrX 82716449 82716635 -83933661 - ORR1D2 LTR MaLR 0 370 192 3 1216 2060 42 0 15 chrX 82716635 82716899 -83933397 - L1Md_F2 LINE L1 -3 6579 6320 3 1216 1335 229 54 59 chrX 82716899 82717084 -83933212 - ORR1D2 LTR MaLR -179 191 2 3 1216 1010 295 18 15 chrX 82717278 82717615 -83932681 - L1MD3 LINE L1 -332 7663 7326 3 1216 334 324 29 0 chrX 82717645 82717747 -83932549 + PB1D10 SINE Alu 12 116 -1 3 1216 237 274 24 12 chrX 82718045 82718130 -83932166 - L1MA4A LINE L1 -371 5932 5847 3 1216 357 282 6 181 chrX 82718430 82718590 -83931706 - B1F SINE Alu -9 140 9 3 1216 678 322 84 76 chrX 82718746 82719157 -83931139 - L1MCc LINE L1 -4891 1532 1111 3 1216 1174 34 0 33 chrX 82719157 82719307 -83930989 - B1_Mus2 SINE Alu -1 146 2 3 1216 678 322 84 76 chrX 82719307 82719583 -83930713 - L1MCc LINE L1 -5313 1110 839 3 1216 237 152 0 42 chrX 82719911 82719959 -83930337 - L1MCc LINE L1 -6103 320 275 3 1216 21 57 0 0 chrX 82720209 82720244 -83930052 + AT_rich Low_complexity Low_complexity 1 35 0 3 1216 327 269 65 138 chrX 82720458 82720704 -83929592 - LTR41B LTR ERVL -24 734 507 3 1216 305 182 0 0 chrX 82720883 82720938 -83929358 + L1ME1 LINE L1 6010 6064 -115 3 1216 254 228 77 20 chrX 82721321 82721403 -83928893 - MLT1F1 LTR MaLR -175 394 282 3 1216 651 340 24 40 chrX 82721504 82721752 -83928544 + B4A SINE B4 35 278 -14 3 1216 297 51 0 0 chrX 82721777 82721816 -83928480 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1216 223 317 0 16 chrX 82722351 82722412 -83927884 + L3 LINE CR1 4424 4483 -6 3 1216 357 266 0 12 chrX 82722727 82722807 -83927489 - ID2 SINE ID -3 80 2 3 1216 384 295 99 15 chrX 82723988 82724119 -83926177 + B1F SINE Alu 1 142 -7 3 1216 684 24 0 0 chrX 82724291 82724373 -83925923 + (GGAA)n Simple_repeat Simple_repeat 4 85 0 3 1216 283 287 118 10 chrX 82724381 82724483 -83925813 + PB1D10 SINE Alu 3 115 -2 3 1216 3139 45 2 0 chrX 82724521 82724919 -83925377 - L1Md_F3 LINE L1 -229 5654 5256 3 1216 7729 32 0 2 chrX 82724919 82725836 -83924460 + L1Md_F3 LINE L1 5670 6584 0 3 1216 295 222 45 90 chrX 82725854 82725943 -83924353 + PB1D10 SINE Alu 32 116 -1 3 1216 213 178 0 0 chrX 82726705 82726750 -83923546 + (CAT)n Simple_repeat Simple_repeat 2 46 0 3 1216 292 345 78 52 chrX 82726759 82726991 -83923305 + L2a LINE L2 3189 3426 0 3 1216 558 0 0 0 chrX 82727634 82727696 -83922600 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 1216 541 305 23 8 chrX 82728045 82728177 -83922119 + B1F SINE Alu 9 142 -7 3 1216 400 261 24 36 chrX 82728259 82728426 -83921870 + CT-rich Low_complexity Low_complexity 3 167 0 3 1216 408 16 16 32 chrX 82728641 82728704 -83921592 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 1216 480 128 0 0 chrX 82728725 82728803 -83921493 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 1216 710 256 130 0 chrX 82728808 82729015 -83921281 - Lx8 LINE L1 -167 7306 7073 3 1216 497 274 103 73 chrX 82729015 82729287 -83921009 + L1ME2 LINE L1 5581 5860 -304 3 1216 1312 109 0 5 chrX 82729305 82729499 -83920797 + B2_Mm2 SINE B2 2 194 -1 3 1216 32447 84 15 8 chrX 82729790 82734511 -83915785 + L1Md_F2 LINE L1 503 5264 -619 3 1216 6997 35 1 0 chrX 82734511 82735341 -83914955 + L1Md_T LINE L1 5752 6582 0 3 1216 32447 78 5 6 chrX 82735341 82736639 -83913657 + L1Md_F2 LINE L1 5265 6548 -34 3 1216 363 17 33 33 chrX 82736639 82736700 -83913596 + (TAAA)n Simple_repeat Simple_repeat 2 62 0 3 1216 246 32 0 0 chrX 82737454 82737485 -83912811 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1216 7291 78 23 0 chrX 82738076 82739506 -83910790 - L1_Mus3 LINE L1 0 6638 5176 3 1216 390 114 29 0 chrX 82739520 82739590 -83910706 - L1_Mus3 LINE L1 -5795 821 750 3 1216 347 21 43 0 chrX 82739621 82739668 -83910628 + (TTTG)n Simple_repeat Simple_repeat 1 49 0 3 1216 1495 226 114 87 chrX 82739698 82740250 -83910046 + RMER2 LTR ERV1 1 567 0 3 1216 319 190 203 6 chrX 82740251 82740436 -83909860 + L1MB4 LINE L1 5609 5829 -354 3 1216 5225 119 20 1 chrX 82740473 82741239 -83909057 - Lx3B LINE L1 -5 6968 6189 3 1216 3924 97 31 2 chrX 82741239 82741898 -83908398 + Lx3B LINE L1 5536 6206 -767 3 1216 606 239 30 15 chrX 82741895 82742095 -83908201 + L1MB4 LINE L1 5818 6020 -160 3 1216 225 234 0 0 chrX 82742106 82742170 -83908126 + (TA)n Simple_repeat Simple_repeat 1 64 0 3 1216 25 31 0 0 chrX 82742175 82742207 -83908089 + AT_rich Low_complexity Low_complexity 1 32 0 3 1216 263 366 90 71 chrX 82742814 82743193 -83907103 - LTR84b LTR ERVL 0 761 376 3 1216 801 248 82 90 chrX 82743334 82743613 -83906683 + B4A SINE B4 3 279 -13 3 1216 414 121 0 0 chrX 82743644 82743710 -83906586 + (CA)n Simple_repeat Simple_repeat 1 66 0 3 1216 256 328 88 52 chrX 82744223 82744416 -83905880 + L2b LINE L2 2963 3162 -213 3 1216 261 0 0 0 chrX 82744493 82744522 -83905774 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 1216 5986 130 51 1 chrX 82744712 82745681 -83904615 + Lx2B LINE L1 5973 6989 -11 3 1216 207 0 0 0 chrX 82745687 82745710 -83904586 + (CAAAC)n Simple_repeat Simple_repeat 3 25 0 3 1216 737 105 191 12 chrX 82746081 82746254 -83904042 - Lx9 LINE L1 -4 7640 7437 3 1216 538 313 123 0 chrX 82746431 82746594 -83903702 + B4 SINE B4 3 185 -107 3 1216 259 292 57 89 chrX 82748253 82748377 -83901919 + MLT1H LTR MaLR 75 194 -355 3 1216 380 244 56 42 chrX 82748360 82748529 -83901767 + MLT1H LTR MaLR 415 574 -5 3 1216 339 25 0 0 chrX 82748971 82749011 -83901285 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 3 1216 450 209 30 37 chrX 82749011 82749140 -83901156 - Lx4B LINE L1 -16 7042 6915 3 1216 220 292 62 0 chrX 82749254 82749319 -83900977 + PB1D10 SINE Alu 46 114 -3 3 1216 5829 108 33 5 chrX 82749656 82750502 -83899794 - Lx2 LINE L1 -1 6996 6127 3 1216 37849 31 3 6 chrX 82750522 82756911 -83893385 - L1Md_T LINE L1 0 6582 214 3 1216 860 123 80 0 chrX 82756911 82757073 -83893223 - Lx2 LINE L1 -855 6142 5968 3 1216 241 297 16 0 chrX 82757149 82757213 -83893083 + ID4 SINE ID 3 67 -16 3 1216 308 286 169 51 chrX 82757387 82757641 -83892655 - L1ME4a LINE L1 -165 5959 5676 3 1216 210 71 0 0 chrX 82758848 82758876 -83891420 + (GA)n Simple_repeat Simple_repeat 2 29 0 3 1216 11791 159 87 43 chrX 82759066 82760240 -83890056 + Lx3_Mus LINE L1 3 1431 -4455 3 1216 298 0 48 0 chrX 82760240 82760282 -83890014 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 3 1216 11791 90 32 7 chrX 82760282 82761982 -83888314 + Lx3_Mus LINE L1 1432 3157 -2729 3 1216 1727 101 45 0 chrX 82761971 82762258 -83888038 + L1_Mm LINE L1 5238 5537 -346 4 1216 8106 80 40 40 chrX 82762256 82764113 -83886183 + Lx3_Mus LINE L1 5154 7009 0 3 1216 332 273 244 39 chrX 82764206 82764362 -83885934 + MER5A DNA MER1_type 2 189 0 4 1216 231 281 81 58 chrX 82764408 82764495 -83885801 + MER5B DNA MER1_type 84 172 -6 4 1216 464 231 0 103 chrX 82765118 82765234 -83885062 + PB1D9 SINE Alu 4 107 -13 4 1216 474 323 101 35 chrX 82766285 82766484 -83883812 - MLT1E1A LTR MaLR -189 491 280 4 1216 4354 105 16 88 chrX 82766725 82767468 -83882828 - Lx3B LINE L1 -6 6967 6278 4 1216 2419 103 22 4 chrX 82767468 82767968 -83882328 + Lx3B LINE L1 5672 6297 -676 4 1216 7230 148 22 19 chrX 82768275 82770312 -83879984 + Lx2 LINE L1 4956 6997 0 4 1216 224 167 21 0 chrX 82770315 82770363 -83879933 + A-rich Low_complexity Low_complexity 2 50 0 4 1216 1637 114 58 36 chrX 82770365 82770673 -83879623 + Lx2 LINE L1 6618 6932 -65 4 1216 387 0 0 0 chrX 82770732 82770775 -83879521 + (GGAAA)n Simple_repeat Simple_repeat 3 45 0 4 1216 1091 124 6 0 chrX 82770777 82770954 -83879342 + (GAAAA)n Simple_repeat Simple_repeat 3 180 0 4 1216 352 222 89 78 chrX 82771348 82771539 -83878757 - Lx9 LINE L1 -7 7637 7445 4 1216 249 125 0 0 chrX 82771544 82771584 -83878712 + Lx9 LINE L1 7397 7436 -208 4 1216 336 411 91 47 chrX 82771897 82772326 -83877970 - MamGypLTR2c LTR Gypsy -447 621 174 4 1216 1269 284 9 14 chrX 82773284 82773705 -83876591 - L1MA6 LINE L1 -373 5927 5509 4 1216 21 0 0 0 chrX 82773736 82773757 -83876539 + AT_rich Low_complexity Low_complexity 1 21 0 4 1216 656 236 234 20 chrX 82773977 82774276 -83876020 - Lx8 LINE L1 -20 7453 7091 4 1216 7721 70 9 23 chrX 82774591 82776534 -83873762 - L1Md_A LINE L1 -3 6978 5129 4 1216 9354 49 2 2 chrX 82776537 82778242 -83872054 - L1Md_F3 LINE L1 -228 6356 4653 4 1216 2669 123 34 7 chrX 82778240 82778681 -83871615 - Lx3A LINE L1 -439 6542 6090 4 1216 667 159 82 7 chrX 82779204 82779350 -83870946 - Lx2 LINE L1 -1 6996 6840 4 1216 1892 299 50 66 chrX 82779360 82779818 -83870478 - Lx9 LINE L1 -211 7433 6959 4 1216 694 179 0 7 chrX 82779818 82779953 -83870343 + Lx4A LINE L1 6924 7057 -1 4 1216 1892 299 50 66 chrX 82779953 82780406 -83869890 - Lx9 LINE L1 -686 6958 6536 4 1216 266 289 115 0 chrX 82780778 82780882 -83869414 - Lx8 LINE L1 -97 7376 7261 4 1216 272 318 139 50 chrX 82781425 82781683 -83868613 + L4 LINE RTE 521 801 -1228 4 1216 497 371 72 11 chrX 82781695 82781957 -83868339 - MLT1J LTR MaLR 0 512 235 4 1216 183 129 0 0 chrX 82782140 82782171 -83868125 + (CATA)n Simple_repeat Simple_repeat 4 34 0 4 1216 3439 38 0 0 chrX 82782620 82783016 -83867280 + MTA_Mm LTR MaLR 1 396 0 4 1216 867 227 23 33 chrX 82783347 82783561 -83866735 - B3 SINE B2 -3 213 2 4 1216 258 389 39 32 chrX 82783873 82784157 -83866139 - ERVL-E-int LTR ERVL -2135 3532 3247 4 1216 254 311 58 8 chrX 82784768 82784888 -83865408 - HERV16-int LTR ERVL -3164 1832 1707 4 1216 523 340 79 40 chrX 82785952 82786372 -83863924 - HERV16-int LTR ERVL -4557 439 4 4 1216 519 344 104 29 chrX 82786374 82786652 -83863644 - LTR16B1 LTR ERVL 0 480 182 4 1216 2783 137 10 44 chrX 82786674 82787192 -83863104 + Lx3B LINE L1 6470 6969 -4 4 1216 22 0 0 0 chrX 82787208 82787230 -83863066 + AT_rich Low_complexity Low_complexity 1 22 0 4 1216 212 100 0 24 chrX 82788045 82788086 -83862210 + (TAA)n Simple_repeat Simple_repeat 1 40 0 4 1216 483 354 70 15 chrX 82788187 82788517 -83861779 + LTR37B LTR ERV1 13 360 -108 4 1216 1353 306 81 13 chrX 82788529 82789146 -83861150 - Lx8 LINE L1 0 7473 6815 4 1216 910 298 67 10 chrX 82789149 82789447 -83860849 + Lx8 LINE L1 6451 6765 -708 4 1216 330 255 9 18 chrX 82789467 82789579 -83860717 + LTR37B LTR ERV1 358 468 0 4 1216 3740 295 93 22 chrX 82790302 82791941 -83858355 - Lx8 LINE L1 0 7473 5716 4 1216 3065 159 16 125 chrX 82791941 82792716 -83857580 - RMER6C LTR ERVK 0 690 1 4 1216 3740 224 174 18 chrX 82792716 82792960 -83857336 - Lx8 LINE L1 -1758 5715 5381 4 1216 658 287 62 57 chrX 82792980 82793159 -83857137 + B3A SINE B2 1 180 -18 4 1216 216 0 0 0 chrX 82793159 82793183 -83857113 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1216 658 287 62 57 chrX 82793183 82793195 -83857101 + B3A SINE B2 181 192 -6 4 1216 349 343 10 10 chrX 82793395 82793498 -83856798 - LTR16C LTR ERVL -136 353 251 4 1216 233 309 31 54 chrX 82794395 82794525 -83855771 + MER77 LTR ERVL 52 178 -429 4 1216 238 279 54 63 chrX 82794831 82794942 -83855354 + MER68 LTR ERVL 440 549 -14 4 1216 791 270 136 26 chrX 82795291 82795710 -83854586 + L1ME3A LINE L1 5695 6159 -14 4 1216 691 288 92 92 chrX 82795931 82796279 -83854017 + MLT1A0 LTR MaLR 1 348 -17 4 1216 253 282 11 45 chrX 82797481 82797570 -83852726 - RMER1C Other Other -9 1333 1248 4 1216 1185 284 116 19 chrX 82797502 82797604 -83852692 - Lx8 LINE L1 -9 7464 7353 4 1216 1208 99 0 54 chrX 82797604 82797807 -83852489 - B2_Mm2 SINE B2 -3 192 1 4 1216 1185 284 116 19 chrX 82797807 82798229 -83852067 - Lx8 LINE L1 -121 7352 6889 4 1216 514 281 140 19 chrX 82798864 82798969 -83851327 + L1M5 LINE L1 2484 2593 -3553 4 1216 333 0 0 0 chrX 82798969 82799006 -83851290 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1216 514 282 136 18 chrX 82799006 82799403 -83850893 + L1M5 LINE L1 2594 3052 -3094 4 1216 514 310 31 53 chrX 82799767 82799995 -83850301 - MLT1B LTR MaLR -2 388 166 4 1216 326 313 0 10 chrX 82799996 82800096 -83850200 + CT-rich Low_complexity Low_complexity 3 101 0 4 1216 317 216 188 8 chrX 82800112 82800229 -83850067 - Lx5 LINE L1 -3 7047 6910 4 1216 3171 200 23 14 chrX 82800289 82800944 -83849352 - Lx5 LINE L1 -138 6912 6252 4 1216 245 29 29 0 chrX 82800950 82800984 -83849312 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 4 1216 1329 204 70 12 chrX 82801010 82801338 -83848958 + Lx5 LINE L1 5894 6240 -810 4 1216 251 253 67 33 chrX 82801365 82801455 -83848841 - MLT1B LTR MaLR -250 124 32 4 1216 5484 146 12 3 chrX 82801613 82802515 -83847781 + Lx2 LINE L1 6088 6997 0 4 1216 244 364 46 57 chrX 82802598 82802702 -83847594 + MIR SINE MIR 52 159 -103 4 1216 1206 249 50 53 chrX 82802702 82803118 -83847178 + MTD LTR MaLR 5 419 0 4 1216 244 364 46 57 chrX 82803118 82803188 -83847108 + MIR SINE MIR 160 224 -38 4 1216 301 283 130 0 chrX 82803650 82803742 -83846554 - L2a LINE L2 -1 3425 3322 4 1216 1366 357 85 75 chrX 82804726 82805841 -83844455 + MLT1J-int LTR MaLR 261 1386 -1 4 1216 2812 186 49 4 chrX 82805870 82806403 -83843893 + Lx5 LINE L1 6494 7050 0 4 1216 314 317 32 24 chrX 82806453 82806579 -83843717 + MLT1J LTR MaLR 69 195 -317 4 1216 22 0 0 0 chrX 82806712 82806734 -83843562 + AT_rich Low_complexity Low_complexity 1 22 0 4 1216 411 290 9 9 chrX 82806793 82806901 -83843395 - B1F2 SINE Alu 0 149 42 4 1216 363 325 17 26 chrX 82807082 82807199 -83843097 - PB1D10 SINE Alu -1 116 1 4 1216 1116 37 15 0 chrX 82807461 82807595 -83842701 + B1_Mm SINE Alu 1 136 -11 4 1216 189 0 0 0 chrX 82807595 82807616 -83842680 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 4 1216 195 233 272 22 chrX 82807772 82807864 -83842432 - MIRb SINE MIR -113 155 41 4 1216 610 345 32 72 chrX 82807965 82808312 -83841984 - Tigger5 DNA MER2_type -2073 333 1 4 1216 356 269 59 99 chrX 82808561 82808763 -83841533 - MTEb LTR MaLR -51 328 135 4 1216 289 268 14 0 chrX 82808853 82808924 -83841372 - PB1D10 SINE Alu -5 112 41 4 1216 442 266 99 23 chrX 82809080 82809211 -83841085 + L2c LINE L2 3247 3387 0 4 1216 188 267 206 22 chrX 82809274 82809366 -83840930 + MIRc SINE MIR 36 144 -124 4 1216 513 239 200 36 chrX 82809517 82809712 -83840584 + B4 SINE B4 3 229 -63 4 1216 405 0 0 0 chrX 82809727 82809772 -83840524 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1216 427 149 0 18 chrX 82809773 82809882 -83840414 + GA-rich Low_complexity Low_complexity 1 107 0 4 1216 312 180 0 32 chrX 82810734 82810797 -83839499 - MLT1A1 LTR MaLR -7 401 341 4 1216 395 356 0 9 chrX 82810800 82810916 -83839380 + RSINE1 SINE B4 4 118 -47 4 1216 245 309 70 101 chrX 82811019 82811092 -83839204 - MLT1A1 LTR MaLR -188 220 159 4 1216 464 241 43 36 chrX 82811092 82811230 -83839066 - B1_Mur2 SINE Alu -6 143 5 4 1216 245 309 70 101 chrX 82811230 82811383 -83838913 - MLT1A1 LTR MaLR -250 158 1 4 1216 639 385 42 21 chrX 82811402 82811736 -83838560 - LTR16A LTR ERVL -6 445 105 4 1216 351 145 0 0 chrX 82812026 82812095 -83838201 + (T)n Simple_repeat Simple_repeat 1 69 0 4 1216 427 292 35 0 chrX 82813001 82813114 -83837182 - PB1D10 SINE Alu 0 117 1 4 1216 226 321 53 44 chrX 82814112 82814226 -83836070 + MLT1H LTR MaLR 413 527 -22 4 1216 392 404 48 30 chrX 82815176 82815444 -83834852 + LTR78 LTR ERV1 770 1042 -262 4 1216 690 268 27 32 chrX 82815452 82815675 -83834621 - B3A SINE B2 0 216 1 4 1216 3218 161 26 31 chrX 82815718 82816361 -83833935 - Lx LINE L1 -13 6641 6002 4 1216 323 127 324 18 chrX 82816361 82816472 -83833824 - B2_Mm2 SINE B2 -4 191 47 4 1216 2104 208 11 19 chrX 82816472 82816519 -83833777 - Lx3C LINE L1 -923 6053 6012 4 1216 1326 85 11 0 chrX 82816519 82816695 -83833601 - B2_Mm1t SINE B2 -14 179 2 4 1216 4597 128 4 1 chrX 82816695 82817640 -83832656 - Lx LINE L1 -644 6010 5063 4 1216 336 179 0 0 chrX 82818059 82818115 -83832181 + Lx2A LINE L1 5754 5809 -1199 4 1216 604 261 71 21 chrX 82818167 82818449 -83831847 - L1MA4 LINE L1 -412 5888 5593 4 1216 198 0 0 0 chrX 82818543 82818565 -83831731 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 1216 195 42 0 0 chrX 82819341 82819365 -83830931 + (CGG)n Simple_repeat Simple_repeat 2 25 0 4 1216 238 412 0 0 chrX 82821063 82821143 -83829153 - MIRb SINE MIR -167 101 22 4 1216 236 238 98 24 chrX 82823302 82823384 -83826912 + Tigger16b DNA Tigger 166 253 -84 4 1216 415 113 0 0 chrX 82823417 82823479 -83826817 + RMER19B LTR ERVK 3 64 -547 4 1216 754 98 0 0 chrX 82823481 82823583 -83826713 + RMER19B LTR ERVK 801 902 0 4 1216 403 297 147 75 chrX 82823587 82823933 -83826363 + Lx8 LINE L1 7072 7442 -31 4 1216 903 216 83 0 chrX 82824129 82824310 -83825986 - B3 SINE B2 -3 213 18 4 1216 464 275 119 0 chrX 82824923 82825083 -83825213 + MIR SINE MIR 66 244 -18 4 1216 255 328 138 63 chrX 82825437 82825626 -83824670 - Tigger16b DNA Tigger -36 301 99 4 1216 186 368 0 0 chrX 82825798 82825866 -83824430 + MIR SINE MIR 7 74 -188 5 1216 246 215 34 34 chrX 82826458 82826530 -83823766 + B1F SINE Alu 49 149 0 5 1216 326 278 43 43 chrX 82826540 82826634 -83823662 + B4A SINE B4 2 95 -197 5 1216 556 292 13 39 chrX 82826638 82826791 -83823505 + RSINE1 SINE B4 6 154 -11 5 1216 255 103 0 0 chrX 82826944 82826983 -83823313 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 5 1216 267 31 0 0 chrX 82827194 82827226 -83823070 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1216 377 318 47 0 chrX 82827233 82827340 -83822956 - RSINE1 SINE B4 -26 139 28 5 1216 236 290 0 31 chrX 82828289 82828353 -83821943 + MIRm SINE MIR 93 154 -122 5 1216 276 255 18 70 chrX 82828437 82828551 -83821745 - PB1D7 SINE Alu -12 108 1 5 1216 327 305 236 10 chrX 82828752 82829239 -83821057 - L1MEg LINE L1 -913 5233 4637 5 1216 274 297 55 14 chrX 82829530 82829796 -83820500 - L1MEg LINE L1 -1899 4247 3967 5 1216 1204 41 0 13 chrX 82830025 82830174 -83820122 + B1_Mus1 SINE Alu 2 148 0 5 1216 574 308 42 28 chrX 82830283 82830500 -83819796 + ID_B1 SINE B4 5 224 0 5 1216 23 33 0 0 chrX 82830605 82830635 -83819661 + AT_rich Low_complexity Low_complexity 1 30 0 5 1216 818 202 53 35 chrX 82830696 82830865 -83819431 - B3 SINE B2 -43 173 2 5 1216 2276 231 78 117 chrX 82830895 82831744 -83818552 - Lx5 LINE L1 -437 6613 5798 5 1216 804 137 0 36 chrX 82831784 82831951 -83818345 - L1_Mur2 LINE L1 -2382 3495 3335 5 1216 860 60 28 63 chrX 82831969 82832112 -83818184 - B1_Mus2 SINE Alu 0 147 10 5 1216 463 192 69 88 chrX 82832112 82832128 -83818168 - ID_B1 SINE B4 0 223 68 5 1216 335 120 0 0 chrX 82832128 82832178 -83818118 - L1_Mur2 LINE L1 -2553 3324 3275 5 1216 261 260 47 19 chrX 82832194 82832300 -83817996 - L1MEg LINE L1 -3903 2243 2135 5 1216 425 207 194 62 chrX 82832774 82832918 -83817378 - RSINE1 SINE B4 0 165 3 5 1216 306 323 90 30 chrX 82833230 82833396 -83816900 - L1MEg LINE L1 -4957 1285 1110 5 1216 334 297 19 123 chrX 82833744 82833955 -83816341 - L1MEg LINE L1 -5353 889 701 5 1216 1286 97 23 0 chrX 82833955 82834131 -83816165 + B2_Mm2 SINE B2 2 181 -14 5 1216 445 62 254 56 chrX 82834158 82834280 -83816016 + B2_Mm2 SINE B2 46 195 0 5 1216 198 103 0 0 chrX 82834321 82834350 -83815946 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1216 366 61 0 0 chrX 82834356 82834405 -83815891 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1216 258 322 17 0 chrX 82834506 82834565 -83815731 - ID4_ SINE ID -7 76 17 5 1216 752 281 155 38 chrX 82836862 82837306 -83812990 - Lx8 LINE L1 -354 7119 6624 5 18 421 232 48 48 chrX 82837446 82837550 -83812746 - PB1D7 SINE Alu -10 110 7 5 1217 233 244 0 0 chrX 82839217 82839258 -83811038 + Alu_5 SINE Alu 10 50 -125 5 1217 284 333 28 9 chrX 82839501 82839607 -83810689 + RMER12 LTR ERVK 743 850 -472 5 1217 273 197 0 0 chrX 82839607 82839668 -83810628 + (CATA)n Simple_repeat Simple_repeat 3 63 0 5 1217 249 83 0 0 chrX 82839899 82839935 -83810361 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1217 6712 22 0 0 chrX 82840011 82840787 -83809509 - L1Md_A LINE L1 0 6582 5807 5 1217 587 287 85 0 chrX 82840863 82841027 -83809269 - MER20 DNA MER1_type -5 214 37 5 1217 275 286 209 43 chrX 82841051 82841190 -83809106 - RSINE1 SINE B4 0 165 4 5 1217 667 268 0 13 chrX 82841754 82841909 -83808387 - RSINE1 SINE B4 -10 155 3 5 1217 1155 129 64 9 chrX 82843539 82843758 -83806538 - Lx2 LINE L1 0 6997 6767 5 1217 1172 237 270 60 chrX 82843758 82844523 -83805773 - L1MC3 LINE L1 -9 7776 6814 5 1217 1298 100 0 6 chrX 82844523 82844704 -83805592 + B2_Mm2 SINE B2 2 181 -14 5 1217 969 204 117 111 chrX 82844704 82844854 -83805442 - L1MC3 LINE L1 -972 6813 6698 5 1217 908 193 70 33 chrX 82844867 82845081 -83805215 - URR1B DNA MER1_type -3 222 1 5 1217 268 301 107 82 chrX 82846140 82846299 -83803997 - MER102c DNA MER1_type -166 164 2 5 1217 298 341 94 31 chrX 82846631 82846758 -83803538 + B1F1 SINE Alu 12 146 -3 5 1217 621 298 108 26 chrX 82846758 82847027 -83803269 + B4A SINE B4 2 292 0 5 1217 2450 206 26 14 chrX 82847293 82847786 -83802510 - Lx7 LINE L1 -873 6823 6325 5 1217 1476 182 52 26 chrX 82847805 82848115 -83802181 + Lx7 LINE L1 6982 7299 -397 5 1217 491 171 61 0 chrX 82848173 82848255 -83802041 + B1_Mur3 SINE Alu 9 95 -54 5 1217 636 217 249 33 chrX 82848259 82848564 -83801732 + Lx7 LINE L1 7326 7696 0 5 1217 193 269 50 25 chrX 82848918 82848998 -83801298 + MIRb SINE MIR 117 198 -70 5 1217 320 266 118 99 chrX 82849747 82849968 -83800328 - L1MC4 LINE L1 -706 7336 7112 5 1217 5851 132 47 10 chrX 82850047 82851026 -83799270 - Lx4B LINE L1 -61 6997 5983 5 1217 4591 120 27 12 chrX 82851053 82851803 -83798493 - L1_Mur2 LINE L1 -795 5082 4322 5 1217 10290 131 41 30 chrX 82851797 82852336 -83797960 - L1_Mur2 LINE L1 -2696 3181 2619 5 1217 1162 56 0 0 chrX 82852336 82852478 -83797818 - B1_Mm SINE Alu -1 146 5 5 1217 10290 131 41 30 chrX 82852478 82853055 -83797241 - L1_Mur2 LINE L1 -3259 2618 2057 5 1217 525 92 0 0 chrX 82853055 82853131 -83797165 + (TG)n Simple_repeat Simple_repeat 1 76 0 5 1217 10290 138 53 30 chrX 82853131 82854540 -83795756 - L1_Mur2 LINE L1 -3821 2056 587 5 1217 364 346 57 19 chrX 82855033 82855192 -83795104 - MER20 DNA MER1_type -50 169 5 5 1217 567 284 31 0 chrX 82855235 82855362 -83794934 + RSINE1 SINE B4 6 136 -29 5 1217 329 283 109 0 chrX 82856400 82856492 -83793804 + PB1D7 SINE Alu 9 110 -10 5 1217 653 323 74 13 chrX 82856670 82856899 -83793397 - B4A SINE B4 -6 286 44 5 1217 234 305 41 31 chrX 82856952 82857050 -83793246 + PB1D10 SINE Alu 12 110 -7 5 1217 21 0 0 0 chrX 82857534 82857555 -83792741 + AT_rich Low_complexity Low_complexity 1 21 0 5 1217 1061 195 29 5 chrX 82857642 82857848 -83792448 - B3 SINE B2 -1 215 5 5 1217 185 239 22 0 chrX 82859037 82859083 -83791213 + MIRc SINE MIR 18 64 -204 5 1217 261 336 29 9 chrX 82861336 82861441 -83788855 - RSINE1 SINE B4 -14 151 45 5 1217 198 0 0 0 chrX 82863310 82863332 -83786964 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 5 1217 25 51 0 0 chrX 82863535 82863574 -83786722 + AT_rich Low_complexity Low_complexity 1 39 0 5 1217 211 423 80 25 chrX 82863720 82863921 -83786375 + MIRb SINE MIR 49 260 -8 5 1217 231 125 0 0 chrX 82865734 82865774 -83784522 + (TCTCTG)n Simple_repeat Simple_repeat 5 44 0 5 1217 212 213 43 0 chrX 82865775 82865822 -83784474 + CT-rich Low_complexity Low_complexity 3 51 0 5 1217 1387 64 16 11 chrX 82865971 82866160 -83784136 + B2_Mm2 SINE B2 2 191 -4 5 1217 252 290 100 0 chrX 82866350 82866450 -83783846 + MIRb SINE MIR 64 173 -95 5 1217 526 250 141 15 chrX 82867693 82867892 -83782404 + MER58A DNA MER1_type 1 224 0 5 1217 1156 48 0 26 chrX 82868313 82868464 -83781832 - B1_Mus1 SINE Alu 0 148 2 5 1217 401 353 84 39 chrX 82870987 82871370 -83778926 + L1M5 LINE L1 3220 3619 -2527 5 1217 674 150 18 9 chrX 82871855 82871969 -83778327 + PB1D9 SINE Alu 1 115 -5 5 1217 278 327 48 0 chrX 82872776 82872880 -83777416 + Charlie20a DNA Charlie 66 174 -633 5 1217 210 309 0 52 chrX 82873009 82873067 -83777229 - B4A SINE B4 -141 151 97 5 1217 237 220 0 0 chrX 82873028 82873074 -83777222 - B1F2 SINE Alu -99 51 6 5 1217 269 145 14 55 chrX 82873093 82873166 -83777130 + CT-rich Low_complexity Low_complexity 2 71 0 5 1217 3741 91 26 97 chrX 82880072 82880908 -83769388 - Lx3_Mus LINE L1 -880 6129 5365 5 1217 2343 57 82 0 chrX 82880908 82881223 -83769073 - L1_Mus2 LINE L1 0 6566 6226 5 1217 3741 87 20 128 chrX 82881223 82881333 -83768963 - Lx3_Mus LINE L1 -522 5364 5262 5 1217 25 31 0 0 chrX 82881476 82881508 -83768788 + AT_rich Low_complexity Low_complexity 1 32 0 5 1217 1521 166 10 17 chrX 82882403 82882698 -83767598 - Lx5 LINE L1 -3 7047 6755 5 1217 903 274 135 42 chrX 82882787 82883142 -83767154 + Lx8 LINE L1 7050 7437 -36 5 1217 264 341 0 11 chrX 82883228 82883317 -83766979 + CT-rich Low_complexity Low_complexity 2 89 0 5 1217 396 276 32 76 chrX 82883329 82883486 -83766810 - Arthur1A DNA Tip100 -24 153 4 5 1217 220 278 139 40 chrX 82883871 82883972 -83766324 + PB1D7 SINE Alu 5 115 -5 5 1217 413 194 83 0 chrX 82884057 82884165 -83766131 + PB1D10 SINE Alu 1 117 0 5 1217 1662 75 37 66 chrX 82884662 82884934 -83765362 - Lx LINE L1 -7 6647 6384 5 1217 264 167 0 0 chrX 82885259 82885307 -83764989 + GA-rich Low_complexity Low_complexity 2 49 0 5 1217 1121 45 0 0 chrX 82885307 82885441 -83764855 + B1_Mm SINE Alu 1 134 -13 5 1217 225 0 0 0 chrX 82885441 82885466 -83764830 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 5 1217 506 318 28 5 chrX 82885530 82885745 -83764551 - ID_B1 SINE B4 -1 223 4 5 1217 794 293 87 20 chrX 82886012 82886266 -83764030 + B4A SINE B4 2 272 -20 5 1217 573 28 0 0 chrX 82886266 82886337 -83763959 + (TC)n Simple_repeat Simple_repeat 2 72 0 5 1217 326 133 52 17 chrX 82886362 82886477 -83763819 + (TCTCTG)n Simple_repeat Simple_repeat 2 120 0 5 1217 678 127 35 0 chrX 82886492 82886665 -83763631 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 5 1217 319 179 32 0 chrX 82886686 82886809 -83763487 + (TCTCTG)n Simple_repeat Simple_repeat 2 128 0 5 1217 270 56 0 0 chrX 82886811 82886847 -83763449 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1217 444 159 120 8 chrX 82887592 82887725 -83762571 - Lx9 LINE L1 -2 7642 7495 5 1217 315 0 0 0 chrX 82887726 82887761 -83762535 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1217 263 91 45 0 chrX 82887761 82887805 -83762491 - Lx9 LINE L1 -188 7456 7411 5 1217 2125 109 25 0 chrX 82887807 82888128 -83762168 + ORR1A4 LTR MaLR 1 329 0 5 1217 228 163 0 0 chrX 82888237 82888280 -83762016 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 5 1217 3293 80 15 4 chrX 82888494 82888956 -83761340 + L1_Mus3 LINE L1 6172 6638 0 5 1217 6091 135 31 2 chrX 82889087 82890557 -83759739 + Lx LINE L1 5135 6648 -6 5 1217 475 229 61 27 chrX 82890776 82890924 -83759372 - L1M2 LINE L1 -631 5660 5508 5 1217 249 291 126 0 chrX 82890941 82891044 -83759252 + L1M3 LINE L1 4079 4194 -1946 5 1217 739 278 141 28 chrX 82892370 82892732 -83757564 + Lx8 LINE L1 6758 7160 -313 6 1217 341 189 93 57 chrX 82892732 82892872 -83757424 + L1MA9 LINE L1 5710 5854 -458 6 1217 249 246 32 16 chrX 82892916 82892978 -83757318 + ID4 SINE ID 12 74 -9 6 1217 230 300 35 59 chrX 82892978 82893001 -83757295 + ID_B1 SINE B4 12 94 -130 6 1217 234 313 67 22 chrX 82893160 82893294 -83757002 + L1MA10 LINE L1 6182 6321 -13 6 1217 3476 154 128 16 chrX 82893328 82893879 -83756417 + Lx7 LINE L1 531 1144 -6584 6 1217 2615 73 0 0 chrX 82893879 82894206 -83756090 - ORR1A2 LTR MaLR 0 327 1 6 1217 3476 139 39 5 chrX 82894206 82894444 -83755852 + Lx7 LINE L1 1145 1402 -4478 6 1217 37 0 0 0 chrX 82894448 82894485 -83755811 + AT_rich Low_complexity Low_complexity 1 37 0 6 1217 924 212 17 21 chrX 82894485 82894726 -83755570 + Lx7 LINE L1 1733 1972 -3908 6 1217 1310 149 7 61 chrX 82894708 82894815 -83755481 + Lx7 LINE L1 5340 5439 -441 6 1217 1095 84 0 32 chrX 82894815 82895000 -83755296 + (GAAAA)n Simple_repeat Simple_repeat 2 180 0 6 1217 1310 149 7 61 chrX 82895000 82895170 -83755126 + Lx7 LINE L1 5440 5602 -278 6 1217 1934 153 38 16 chrX 82895170 82895489 -83754807 - MTC LTR MaLR 0 421 96 6 1217 297 0 0 0 chrX 82895489 82895522 -83754774 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1217 2480 206 6 6 chrX 82895529 82896003 -83754293 + Lx7 LINE L1 6220 6693 -1003 6 1217 628 199 11 37 chrX 82896003 82896191 -83754105 + Lx7 LINE L1 7514 7696 0 6 1217 495 239 283 18 chrX 82896207 82896539 -83753757 + L1MB3 LINE L1 5679 6098 -73 6 1217 499 246 110 15 chrX 82896666 82896802 -83753494 + B3 SINE B2 67 215 -1 6 1217 806 230 16 73 chrX 82896819 82897011 -83753285 + B4A SINE B4 100 280 -12 6 1217 420 20 0 0 chrX 82897014 82897063 -83753233 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1217 369 284 0 22 chrX 82897520 82897610 -83752686 + PB1D10 SINE Alu 18 105 -12 6 1217 838 134 0 1 chrX 82897610 82897760 -83752536 - L1_Mur1 LINE L1 -788 5512 5359 6 1217 3078 151 133 22 chrX 82897771 82898888 -83751408 - Lx3C LINE L1 -2 6974 5730 6 1217 303 306 0 0 chrX 82899080 82899152 -83751144 + ID_B1 SINE B4 151 222 -2 6 1217 310 245 26 26 chrX 82899581 82899694 -83750602 - Lx8 LINE L1 -373 5930 5800 6 1217 328 75 60 0 chrX 82900278 82900345 -83749951 + (TCTG)n Simple_repeat Simple_repeat 2 72 0 6 1217 654 13 0 0 chrX 82900392 82900467 -83749829 + (CA)n Simple_repeat Simple_repeat 2 76 0 6 1217 980 143 53 0 chrX 82901266 82901455 -83748841 + L1_Mur3 LINE L1 4908 5106 -774 6 1217 1135 123 0 40 chrX 82901458 82901635 -83748661 + RMER6A LTR ERVK 585 754 -2 6 1217 1340 93 0 10 chrX 82901635 82901830 -83748466 + B2_Mm2 SINE B2 3 195 0 6 1217 7133 191 63 10 chrX 82901847 82903476 -83746820 - L1_Mur1 LINE L1 -264 5622 3908 6 1217 937 176 6 0 chrX 82903478 82903637 -83746659 - MTC-int LTR MaLR -1093 165 6 6 1217 2090 186 45 27 chrX 82903643 82904047 -83746249 - MTC LTR MaLR -8 413 3 6 1217 2246 108 51 14 chrX 82904101 82904456 -83745840 + RLTR9A LTR ERVK 1 368 0 6 1217 229 261 13 80 chrX 82904522 82904538 -83745758 + B4A SINE B4 78 88 -204 6 1217 429 204 11 53 chrX 82904538 82904658 -83745638 + PB1D7 SINE Alu 3 118 -2 6 1217 234 91 0 0 chrX 82904972 82905005 -83745291 + (T)n Simple_repeat Simple_repeat 1 33 0 6 1217 1563 153 131 16 chrX 82905245 82905550 -83744746 - ORR1B2 LTR MaLR -26 341 2 6 1217 279 161 0 0 chrX 82906343 82906435 -83743861 + (TATATG)n Simple_repeat Simple_repeat 1 92 0 6 1217 32882 29 64 7 chrX 82906992 82913020 -83737276 - L1Md_T LINE L1 -1 6581 214 6 1217 1676 301 20 23 chrX 82913029 82913672 -83736624 - Lx8 LINE L1 -121 7352 6712 6 1217 5025 57 1 0 chrX 82913722 82914384 -83735912 + L1Md_F2 LINE L1 4923 5585 -298 6 1217 7541 57 16 6 chrX 82914385 82915356 -83734940 + L1Md_F2 LINE L1 5587 6567 -15 6 1217 1285 304 32 0 chrX 82915370 82915774 -83734522 - Lx8 LINE L1 -830 6643 6227 6 1217 261 0 0 0 chrX 82915793 82915822 -83734474 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1217 393 22 0 0 chrX 82915822 82915867 -83734429 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 1217 3376 35 2 2 chrX 82916049 82916445 -83733851 + MTA_Mm LTR MaLR 1 396 0 6 1217 347 348 35 0 chrX 82916449 82916564 -83733732 - B1F1 SINE Alu -30 119 1 6 1217 326 265 0 0 chrX 82917154 82917222 -83733074 - B3A SINE B2 -130 68 1 6 1217 473 300 13 0 chrX 82917302 82917452 -83732844 - L1M2 LINE L1 -523 5768 5617 6 1217 261 0 0 0 chrX 82917945 82917974 -83732322 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 6 1217 3348 172 117 6 chrX 82918004 82918967 -83731329 - L1_Mur2 LINE L1 -3889 1988 919 6 1217 967 324 17 60 chrX 82919253 82919732 -83730564 - MuRRS4-int LTR ERV1 -1050 4013 3556 6 1217 265 359 97 10 chrX 82920250 82920540 -83729756 - RLTR4_MM-int LTR ERV1 -3369 4232 3918 6 1217 343 281 48 66 chrX 82920922 82921193 -83729103 - RLTR6-int LTR ERV1 -5303 2149 1884 6 1217 574 349 33 15 chrX 82921296 82921692 -83728604 - RLTR6-int LTR ERV1 -5820 1958 1556 6 1217 252 0 0 0 chrX 82921985 82922013 -83728283 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 1217 5482 54 14 3 chrX 82922421 82923109 -83727187 + L1_Mus1 LINE L1 5872 6567 0 6 1217 2213 171 22 30 chrX 82923358 82923862 -83726434 - RMER2 LTR ERV1 0 567 31 6 1217 1907 53 0 8 chrX 82923871 82924116 -83726180 + L1Md_F2 LINE L1 6329 6571 -11 6 1217 500 279 22 63 chrX 82924214 82924436 -83725860 - B3 SINE B2 0 216 4 6 1217 2755 181 17 47 chrX 82924466 82925046 -83725250 - Lx5 LINE L1 0 7050 6488 6 1217 885 179 10 67 chrX 82925047 82925256 -83725040 + MYSERV-int LTR ERVK 6352 6548 -2 6 1217 1999 213 47 21 chrX 82925258 82925772 -83724524 + RLTR11A2 LTR ERVK 1 527 0 6 1217 970 151 43 5 chrX 82925780 82925967 -83724329 + L1_Mur2 LINE L1 5314 5507 -370 6 1217 246 338 58 58 chrX 82926163 82926301 -83723995 + MLT1H LTR MaLR 143 280 -269 6 1217 236 251 50 26 chrX 82926426 82926509 -83723787 + MLT1H LTR MaLR 461 586 -38 6 1217 21 95 0 0 chrX 82926515 82926578 -83723718 + AT_rich Low_complexity Low_complexity 1 63 0 6 1217 488 330 17 33 chrX 82926722 82926963 -83723333 - Lx8 LINE L1 -223 7250 7014 6 1217 372 250 28 57 chrX 82927052 82927158 -83723138 + PB1D7 SINE Alu 13 115 -5 6 1217 207 0 0 0 chrX 82927179 82927202 -83723094 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 1217 219 357 0 0 chrX 82927848 82927918 -83722378 - ID4 SINE ID 0 83 14 6 1217 495 231 58 29 chrX 82928507 82928645 -83721651 + B1F1 SINE Alu 5 146 -3 6 1217 900 90 3 1 chrX 82928998 82929145 -83721151 - L1_Mur3 LINE L1 -3887 1993 1841 6 1217 23217 121 90 6 chrX 82929156 82934793 -83715503 + L1_Mus3 LINE L1 493 6638 0 6 1217 455 302 151 0 chrX 82934927 82935106 -83715190 + ID_B1 SINE B4 3 208 -16 6 1217 401 320 0 0 chrX 82935158 82935255 -83715041 + PB1D7 SINE Alu 23 119 -1 6 1217 7787 51 2 2 chrX 82935412 82937109 -83713187 - L1Md_F2 LINE L1 -12 6570 4875 6 1217 1228 60 0 0 chrX 82937113 82937279 -83713017 + L1Md_F2 LINE L1 4701 4866 -1017 6 1217 248 296 14 14 chrX 82937763 82937835 -83712461 + PB1D10 SINE Alu 1 72 -45 6 1217 348 256 0 22 chrX 82938537 82938629 -83711667 - Lx9 LINE L1 -396 7248 7159 6 1217 813 262 102 37 chrX 82938698 82939051 -83711245 + Lx9 LINE L1 7254 7629 -15 6 1217 506 150 33 0 chrX 82939101 82939221 -83711075 + GA-rich Low_complexity Low_complexity 2 125 0 6 1217 930 64 34 17 chrX 82939226 82939402 -83710894 + (GA)n Simple_repeat Simple_repeat 2 180 0 6 1217 286 182 44 29 chrX 82939424 82939492 -83710804 + MTD LTR MaLR 258 326 -93 6 1217 24 0 0 0 chrX 82939672 82939696 -83710600 + AT_rich Low_complexity Low_complexity 1 24 0 6 1217 450 313 77 53 chrX 82939761 82939983 -83710313 - L1MB7 LINE L1 -25 6159 5947 6 1217 3598 57 0 15 chrX 82939983 82940445 -83709851 - L1_Mus1 LINE L1 0 6567 6113 6 1217 1381 225 47 43 chrX 82940445 82940916 -83709380 - L1MB7 LINE L1 -238 5946 5390 6 1217 1349 299 119 113 chrX 82940914 82942577 -83707719 + Lx9 LINE L1 5831 7380 -93 6 1217 449 248 130 12 chrX 82942621 82942874 -83707422 - L1MB7 LINE L1 -217 5967 5685 6 1217 279 0 0 0 chrX 82942965 82942996 -83707300 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1217 678 278 89 69 chrX 82943098 82943386 -83706910 + MTE2a LTR MaLR 55 362 -57 6 1217 239 290 48 0 chrX 82943441 82943503 -83706793 - ID4 SINE ID -2 81 17 6 1217 3371 33 5 0 chrX 82943503 82943897 -83706399 - MTA_Mm LTR MaLR 0 396 1 6 1217 698 158 163 12 chrX 82943955 82944121 -83706175 + ORR1D1 LTR MaLR 1 191 -183 6 1217 2627 190 58 2 chrX 82944217 82944735 -83705561 + ORR1D1-int LTR MaLR 824 1370 0 6 1217 1257 200 101 24 chrX 82944735 82945022 -83705274 + ORR1D1 LTR MaLR 1 309 -65 6 1217 576 0 0 0 chrX 82945869 82945933 -83704363 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 1217 656 234 22 17 chrX 82946069 82946247 -83704049 - B3A SINE B2 -15 183 5 6 1217 402 134 0 0 chrX 82946853 82946920 -83703376 + (TC)n Simple_repeat Simple_repeat 2 68 0 6 1217 261 0 0 0 chrX 82946920 82946949 -83703347 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 1217 762 124 14 58 chrX 82946950 82947132 -83703164 + ORR1B1 LTR MaLR 2 202 -192 6 1217 235 156 22 0 chrX 82947111 82947156 -83703140 + ORR1B1 LTR MaLR 93 138 -191 6 1217 434 131 0 0 chrX 82947159 82947220 -83703076 + ORR1B1 LTR MaLR 334 394 0 6 1217 864 170 0 14 chrX 82947331 82947474 -83702822 + B1_Mur2 SINE Alu 3 143 -6 6 1217 285 79 0 0 chrX 82947474 82947512 -83702784 + PB1D9 SINE Alu 78 115 -5 6 1217 458 253 46 40 chrX 82952442 82952594 -83697702 + RSINE1 SINE B4 3 155 -10 6 1217 273 267 256 22 chrX 82953087 82953267 -83697029 + ID_B1 SINE B4 3 224 0 6 1217 326 324 27 27 chrX 82954074 82954220 -83696076 + B1F SINE Alu 1 146 -3 6 1217 418 274 113 17 chrX 82954438 82954553 -83695743 + ID_B1 SINE B4 80 205 -19 6 1217 25 0 0 0 chrX 82954582 82954607 -83695689 + AT_rich Low_complexity Low_complexity 1 25 0 6 1217 3168 68 2 2 chrX 82955241 82955655 -83694641 + L1_Mus1 LINE L1 6154 6567 0 6 1217 1206 85 38 43 chrX 82956974 82957159 -83693137 + B2_Mm2 SINE B2 4 187 -8 6 1217 833 141 0 8 chrX 82957298 82957427 -83692869 - B1_Mur1 SINE Alu -21 128 1 6 1217 234 0 0 0 chrX 82957442 82957468 -83692828 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 1217 28 0 0 0 chrX 82958532 82958560 -83691736 + AT_rich Low_complexity Low_complexity 1 28 0 6 1217 241 302 90 19 chrX 82958768 82958961 -83691335 - Lx8 LINE L1 -490 7154 6801 7 1217 302 259 79 36 chrX 82959484 82959662 -83690634 - L1MA4 LINE L1 -1 6299 6104 7 1217 549 279 91 84 chrX 82960038 82960324 -83689972 - B4 SINE B4 0 292 5 7 1217 763 212 20 0 chrX 82960818 82960964 -83689332 - B1_Mur1 SINE Alu 0 149 1 7 1217 596 191 159 45 chrX 82962943 82963119 -83687177 + B3A SINE B2 2 197 -1 7 1217 467 321 104 45 chrX 82963501 82963723 -83686573 - B4 SINE B4 -57 235 1 7 1217 480 289 112 77 chrX 82963811 82964264 -83686032 + MLT1E3 LTR MaLR 43 657 -23 7 1217 228 264 19 0 chrX 82964581 82964634 -83685662 + RSINE1 SINE B4 100 153 -12 7 1217 378 0 0 0 chrX 82964652 82964694 -83685602 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 1217 261 167 0 0 chrX 82966058 82966112 -83684184 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1217 318 294 117 19 chrX 82966384 82966641 -83683655 + L1ME3B LINE L1 5955 6236 -4 7 1217 21 0 0 0 chrX 82966648 82966669 -83683627 + AT_rich Low_complexity Low_complexity 1 21 0 7 1217 671 168 275 0 chrX 82966704 82966871 -83683425 - B3 SINE B2 -2 214 2 7 1217 713 55 0 9 chrX 82966944 82967053 -83683243 + L1Md_F3 LINE L1 6475 6582 -2 7 1217 658 295 70 25 chrX 82967064 82967467 -83682829 + L1MEg LINE L1 891 1311 -4773 7 1217 226 260 288 0 chrX 82967474 82967547 -83682749 + B1F2 SINE Alu 26 119 -1 7 1217 753 188 0 0 chrX 82967696 82967845 -83682451 + (TA)n Simple_repeat Simple_repeat 1 149 0 7 1217 218 345 115 0 chrX 82967886 82967973 -83682323 + B1F1 SINE Alu 2 98 -51 7 152 25590 72 9 13 chrX 82968247 82971768 -83678528 + L1Md_F2 LINE L1 2077 5584 -299 7 1218 7096 87 1 17 chrX 82971768 82972772 -83677524 + L1Md_F2 LINE L1 5595 6582 0 7 1218 500 286 29 36 chrX 82973771 82973909 -83676387 + ID_B1 SINE B4 88 224 0 7 1218 304 284 0 0 chrX 82974282 82974349 -83675947 + ID2 SINE ID 4 70 -13 7 1218 277 226 6 143 chrX 82974697 82974797 -83675499 - ID4_ SINE ID -47 105 15 7 1218 377 268 51 10 chrX 82975359 82975457 -83674839 + B1F1 SINE Alu 45 146 -3 7 1218 738 214 27 27 chrX 82975683 82975832 -83674464 - B1_Mur1 SINE Alu 0 149 1 7 1218 2025 164 31 62 chrX 82977016 82977406 -83672890 + ORR1C1 LTR MaLR 1 378 0 7 1218 292 224 0 17 chrX 82978020 82978079 -83672217 - B1_Mur1 SINE Alu -25 124 67 7 1218 563 160 0 11 chrX 82978071 82978166 -83672130 + ORR1B1 LTR MaLR 292 385 -9 7 1218 271 254 25 57 chrX 82978179 82978282 -83672014 - B1F2 SINE Alu -43 106 2 7 1218 714 251 87 11 chrX 82978286 82978471 -83671825 + B3 SINE B2 1 199 -17 7 1218 598 268 46 38 chrX 82978904 82979141 -83671155 + ORR1E LTR MaLR 3 241 -118 7 1218 252 77 0 0 chrX 82979175 82979214 -83671082 + (T)n Simple_repeat Simple_repeat 1 39 0 7 1218 378 281 43 7 chrX 82980154 82980294 -83670002 + B1F1 SINE Alu 5 149 0 7 1218 279 0 0 0 chrX 82980374 82980405 -83669891 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 1218 651 263 185 68 chrX 82980442 82980809 -83669487 + Lx6 LINE L1 7024 7433 -27 7 1218 1167 97 40 61 chrX 82980824 82980973 -83669323 + B2_Mm2 SINE B2 2 158 -37 7 1218 303 28 0 0 chrX 82980973 82981009 -83669287 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 7 1218 1167 97 40 61 chrX 82981009 82981057 -83669239 + B2_Mm2 SINE B2 159 195 0 7 1218 223 379 40 16 chrX 82981211 82981337 -83668959 + MIRb SINE MIR 71 199 -69 7 1218 238 308 92 46 chrX 82981683 82981792 -83668504 + B1F SINE Alu 36 149 0 7 1218 448 331 53 41 chrX 82981819 82981989 -83668307 + ID_B1 SINE B4 2 173 -51 7 1218 275 122 20 0 chrX 82982452 82982501 -83667795 + (CCCCCT)n Simple_repeat Simple_repeat 5 54 0 7 1218 350 190 0 0 chrX 82982510 82982568 -83667728 - ID_B1 SINE B4 -6 218 161 7 1218 303 28 0 0 chrX 82983669 82983705 -83666591 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 1218 242 275 29 0 chrX 82983809 82983878 -83666418 - ID4 SINE ID -10 73 3 7 1218 291 382 32 0 chrX 82985952 82986109 -83664187 + RSINE1 SINE B4 4 165 0 7 1218 253 359 0 49 chrX 82986123 82986205 -83664091 + B4A SINE B4 71 148 -144 7 1218 465 286 5 4 chrX 82986146 82986282 -83664014 + PB1D7 SINE Alu 5 132 -17 7 1218 581 251 63 117 chrX 82986658 82986708 -83663588 - MER33 DNA MER1_type -14 310 265 7 1218 636 248 7 14 chrX 82986708 82986851 -83663445 + RSINE1 SINE B4 5 146 -19 7 1218 581 251 63 117 chrX 82986851 82986918 -83663378 - MER33 DNA MER1_type -60 264 225 7 1218 222 62 0 0 chrX 82986918 82986950 -83663346 + (TAGA)n Simple_repeat Simple_repeat 4 35 0 7 1218 581 251 63 117 chrX 82986950 82987147 -83663149 - MER33 DNA MER1_type -100 224 13 7 1218 557 249 136 31 chrX 82987959 82988150 -83662146 + B3 SINE B2 1 211 -5 7 1218 525 212 150 0 chrX 82988185 82988298 -83661998 + B1_Mur1 SINE Alu 4 133 -16 7 1218 294 147 0 0 chrX 82988298 82988366 -83661930 + (GA)n Simple_repeat Simple_repeat 1 68 0 7 1218 455 299 7 33 chrX 82988378 82988530 -83661766 + B1F SINE Alu 2 149 0 7 1218 23 0 0 0 chrX 82988599 82988622 -83661674 + AT_rich Low_complexity Low_complexity 1 23 0 7 1218 1629 37 0 0 chrX 82990666 82990855 -83659441 - B2_Mm1t SINE B2 -4 189 1 7 1218 225 0 0 0 chrX 82990858 82990883 -83659413 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 7 1218 4202 15 0 0 chrX 82990887 82991363 -83658933 - L1Md_A LINE L1 -9 6573 6098 7 1218 242 377 69 8 chrX 82992831 82992962 -83657334 + MLT1K LTR MaLR 27 165 -430 7 1218 417 299 81 5 chrX 82993467 82993700 -83656596 + MER112 DNA MER1_type 5 261 0 7 1218 254 345 45 18 chrX 82994435 82994547 -83655749 + MIR3 SINE MIR 65 179 -29 7 1218 273 98 0 0 chrX 82996257 82996298 -83653998 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1218 311 252 160 0 chrX 82996782 82996913 -83653383 - RSINE1 SINE B4 -4 161 10 7 1218 509 243 0 9 chrX 82997098 82997210 -83653086 - ID_B1 SINE B4 -20 204 94 7 1218 423 245 83 41 chrX 82997313 82997458 -83652838 + MLT1A0 LTR MaLR 215 365 0 7 1218 543 315 0 7 chrX 82997983 82998130 -83652166 + ID_B1 SINE B4 79 224 0 7 1218 577 343 0 0 chrX 82998135 82998275 -83652021 + RSINE1 SINE B4 7 146 -19 7 1218 359 344 69 0 chrX 82998873 82999004 -83651292 - B1F1 SINE Alu -8 141 2 7 1218 370 267 78 71 chrX 82999836 82999977 -83650319 - B1_Mur2 SINE Alu -6 143 2 7 1218 1502 38 38 0 chrX 83000214 83000397 -83649899 - B2_Mm2 SINE B2 -4 191 2 1 1218 334 220 51 107 chrX 83000476 83000621 -83649675 + PB1D10 SINE Alu 1 149 0 2 1218 501 264 27 131 chrX 83000629 83000812 -83649484 + RSINE1 SINE B4 2 165 0 3 1218 1035 140 0 0 chrX 83000827 83000998 -83649298 + (GAAA)n Simple_repeat Simple_repeat 4 174 0 4 1218 351 44 0 0 chrX 83000998 83001043 -83649253 + (GGGA)n Simple_repeat Simple_repeat 2 46 0 5 1218 728 239 0 0 chrX 83001849 83001979 -83648317 - RSINE1 SINE B4 -33 132 3 6 1218 459 267 13 70 chrX 83002280 83002437 -83647859 + B1F SINE Alu 1 148 -1 7 1218 350 255 30 20 chrX 83003024 83003124 -83647172 + B1_Mus1 SINE Alu 27 127 -21 8 1218 314 227 39 0 chrX 83003538 83003629 -83646667 + PB1D9 SINE Alu 1 97 -20 9 1218 342 0 0 0 chrX 83003745 83003783 -83646513 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1218 24 0 0 0 chrX 83003831 83003855 -83646441 + AT_rich Low_complexity Low_complexity 1 24 0 1 1218 286 264 26 53 chrX 83003855 83003931 -83646365 + ID_B1 SINE B4 79 152 -72 1 1218 367 296 20 0 chrX 83003869 83003967 -83646329 + PB1D9 SINE Alu 12 111 -9 1 1218 240 304 9 18 chrX 83004841 83004955 -83645341 + A-rich Low_complexity Low_complexity 4 116 0 1 1218 26 50 0 0 chrX 83005282 83005322 -83644974 + AT_rich Low_complexity Low_complexity 1 40 0 1 1218 479 199 162 0 chrX 83005327 83005463 -83644833 - Lx6 LINE L1 -20 7440 7283 1 1218 234 0 0 0 chrX 83005775 83005801 -83644495 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 1218 371 179 274 0 chrX 83006914 83006998 -83643298 + B3A SINE B2 3 109 -89 1 1218 402 21 0 0 chrX 83007003 83007050 -83643246 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1218 234 0 0 0 chrX 83007050 83007075 -83643221 + (GA)n Simple_repeat Simple_repeat 2 27 0 2 1218 315 297 26 26 chrX 83007145 83007259 -83643037 + PB1D7 SINE Alu 1 114 -6 2 1218 590 101 9 27 chrX 83007277 83007389 -83642907 + (GAAA)n Simple_repeat Simple_repeat 2 111 0 2 1218 585 196 294 0 chrX 83007400 83007563 -83642733 + B3 SINE B2 4 214 -2 2 1218 368 222 50 10 chrX 83007599 83007699 -83642597 + Lx8 LINE L1 6691 6794 -679 2 1218 604 264 60 22 chrX 83007702 83007934 -83642362 + Lx8 LINE L1 6962 7202 -271 2 1218 488 241 26 0 chrX 83008166 83008282 -83642014 + PB1D7 SINE Alu 2 120 0 2 1218 234 0 0 0 chrX 83008631 83008657 -83641639 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 1218 279 0 0 0 chrX 83008657 83008687 -83641609 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1218 358 331 33 80 chrX 83009334 83009485 -83640811 + B1F2 SINE Alu 6 149 0 2 1218 589 311 0 58 chrX 83009522 83009693 -83640603 + ID_B1 SINE B4 8 168 -56 2 1218 398 224 33 116 chrX 83009603 83009711 -83640585 + PB1D10 SINE Alu 6 107 -10 3 1218 419 295 85 8 chrX 83009711 83009841 -83640455 + B1_Mur1 SINE Alu 1 140 -9 3 1218 398 224 33 116 chrX 83009841 83009853 -83640443 + PB1D10 SINE Alu 108 116 -1 3 1218 417 316 0 14 chrX 83009870 83010008 -83640288 + B1F SINE Alu 1 136 -13 3 1218 852 312 28 28 chrX 83010074 83010364 -83639932 + B4A SINE B4 3 292 0 3 1218 401 180 112 0 chrX 83010484 83010573 -83639723 + PB1D7 SINE Alu 20 118 -2 3 1218 2366 140 41 10 chrX 83010936 83011325 -83638971 + MTC LTR MaLR 1 401 -20 3 1218 210 343 99 73 chrX 83011870 83011889 -83638407 + B4 SINE B4 69 91 -201 3 1218 514 250 98 8 chrX 83011889 83012022 -83638274 + B1F SINE Alu 4 148 -1 3 1218 351 0 0 0 chrX 83012179 83012218 -83638078 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1218 210 163 0 23 chrX 83012275 83012319 -83637977 + T-rich Low_complexity Low_complexity 5 47 0 3 1218 219 222 0 0 chrX 83012358 83012394 -83637902 + B1F2 SINE Alu 1 36 -113 4 1218 28 0 0 0 chrX 83012453 83012481 -83637815 + AT_rich Low_complexity Low_complexity 1 28 0 4 1218 680 180 102 0 chrX 83012534 83012662 -83637634 + B1_Mur3 SINE Alu 2 142 -7 4 1218 375 60 0 0 chrX 83012672 83012722 -83637574 + (TAA)n Simple_repeat Simple_repeat 2 51 0 4 1218 545 241 75 0 chrX 83012727 83012860 -83637436 + B1F SINE Alu 1 143 -6 4 1218 510 294 97 3 chrX 83012872 83013010 -83637286 + ID_B1 SINE B4 79 225 -67 4 1218 656 169 295 0 chrX 83013140 83013306 -83636990 + B3 SINE B2 1 215 -1 4 1218 620 342 23 23 chrX 83013345 83013566 -83636730 + ID_B1 SINE B4 2 222 -2 4 1218 524 275 25 8 chrX 83013700 83013821 -83636475 + ID_B1 SINE B4 102 224 0 4 1218 644 243 7 14 chrX 83014188 83014326 -83635970 + ID_B1 SINE B4 86 222 -2 4 1218 1362 80 26 16 chrX 83014329 83014520 -83635776 + B2_Mm2 SINE B2 2 194 -1 5 1218 386 302 113 8 chrX 83014683 83014804 -83635492 - PB1D10 SINE Alu 0 149 9 5 1218 318 366 18 53 chrX 83014804 83014974 -83635322 + RSINE1 SINE B4 2 165 0 5 1218 594 265 35 75 chrX 83015064 83015264 -83635032 + B3 SINE B2 1 192 -3 5 1218 735 253 41 6 chrX 83015273 83015444 -83634852 + B3 SINE B2 23 199 -17 5 1218 1316 91 11 0 chrX 83015445 83015621 -83634675 + B2_Mm1t SINE B2 2 179 -14 5 1218 358 278 56 56 chrX 83015717 83015877 -83634419 + RSINE1 SINE B4 5 164 -1 5 1218 431 295 62 0 chrX 83015911 83016023 -83634273 + ID_B1 SINE B4 84 202 -22 5 1218 224 338 0 0 chrX 83016049 83016126 -83634170 + ID4 SINE ID 4 80 -3 5 1218 368 270 55 55 chrX 83016305 83016450 -83633846 + B1F SINE Alu 1 145 -4 5 1218 411 113 0 0 chrX 83016518 83016580 -83633716 + (GGAA)n Simple_repeat Simple_repeat 1 62 0 6 1218 212 178 22 0 chrX 83016600 83016645 -83633651 + B4 SINE B4 2 47 -245 6 1218 207 204 0 0 chrX 83016651 83016695 -83633601 + A-rich Low_complexity Low_complexity 2 45 0 6 1218 250 330 27 54 chrX 83017092 83017204 -83633092 + MIRc SINE MIR 35 143 -125 6 1218 361 287 0 11 chrX 83017570 83017665 -83632631 + RSINE1 SINE B4 2 95 -70 6 1218 661 203 47 40 chrX 83017676 83017825 -83632471 + B1_Mur4 SINE Alu 1 150 0 6 1218 275 359 0 25 chrX 83017836 83017916 -83632380 + RSINE1 SINE B4 87 164 -1 6 1218 643 237 192 0 chrX 83017994 83018171 -83632125 + B3 SINE B2 1 211 -5 6 1218 255 286 0 35 chrX 83018205 83018263 -83632033 + ID2 SINE ID 26 81 -2 6 1218 26 0 0 0 chrX 83018910 83018936 -83631360 + AT_rich Low_complexity Low_complexity 1 26 0 6 1218 707 218 30 71 chrX 83019402 83019517 -83630779 - RSINE1 SINE B4 -2 163 46 6 1218 1097 60 0 0 chrX 83019517 83019650 -83630646 + B1_Mus2 SINE Alu 2 134 -13 7 1218 210 71 0 0 chrX 83019650 83019678 -83630618 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 7 1218 707 218 30 71 chrX 83019678 83019729 -83630567 - RSINE1 SINE B4 -120 45 4 6 1218 433 299 44 7 chrX 83019775 83019910 -83630386 + B1F SINE Alu 2 141 -8 7 1218 1015 273 0 0 chrX 83019921 83020126 -83630170 + B3 SINE B2 6 210 -6 7 1218 339 85 0 0 chrX 83020414 83020461 -83629835 + (A)n Simple_repeat Simple_repeat 1 47 0 7 1218 396 221 48 9 chrX 83020867 83020972 -83629324 + PB1D10 SINE Alu 9 117 0 7 1218 219 206 171 110 chrX 83023080 83023162 -83627134 + ID_B1 SINE B4 82 168 -56 7 1218 1067 56 0 7 chrX 83023191 83023335 -83626961 + (GAAA)n Simple_repeat Simple_repeat 2 144 0 7 1218 520 230 97 0 chrX 83024254 83024367 -83625929 + ID_B1 SINE B4 98 221 -3 7 1218 359 274 81 43 chrX 83025104 83025292 -83625004 - ID_B1 SINE B4 -47 245 59 7 1218 461 256 17 0 chrX 83025476 83025593 -83624703 + PB1D7 SINE Alu 2 120 0 8 1218 484 287 58 7 chrX 83025902 83026039 -83624257 + B1F SINE Alu 1 144 -5 8 1218 2321 185 82 41 chrX 83026078 83026464 -83623832 + RMER6A LTR ERVK 57 461 -295 8 1218 555 16 0 0 chrX 83026464 83026528 -83623768 + (GA)n Simple_repeat Simple_repeat 1 64 0 8 1218 2321 161 38 9 chrX 83026528 83026894 -83623402 + RMER6A LTR ERVK 376 753 -3 8 1218 217 219 0 0 chrX 83026894 83026935 -83623361 + ID4 SINE ID 6 46 -37 8 1218 1617 227 94 8 chrX 83027048 83027421 -83622875 + MTC LTR MaLR 12 416 -5 8 1218 2605 194 28 107 chrX 83027913 83028584 -83621712 + RMER20B LTR ERVK 10 627 0 8 1218 246 266 15 15 chrX 83028891 83028956 -83621340 - MER5A DNA MER1_type 0 189 125 8 1218 663 143 59 85 chrX 83028956 83029109 -83621187 + B1_Mur4 SINE Alu 2 150 0 8 1218 261 297 27 0 chrX 83029236 83029310 -83620986 - MER5A DNA MER1_type -103 86 11 8 1218 250 312 240 8 chrX 83029383 83029512 -83620784 + RSINE1 SINE B4 3 161 -4 8 1218 858 216 88 21 chrX 83029539 83029733 -83620563 + B3 SINE B2 1 207 -9 9 1218 400 290 9 9 chrX 83029823 83029931 -83620365 + PB1D10 SINE Alu 10 117 0 9 1218 663 258 13 19 chrX 83029944 83030097 -83620199 + ID_B1 SINE B4 87 236 -56 9 1218 1761 294 73 33 chrX 83030268 83030745 -83619551 - Lx9 LINE L1 -174 7470 6948 9 1218 2142 151 25 19 chrX 83030745 83031109 -83619187 - ORR1B2 LTR MaLR 0 367 2 9 1218 1761 294 73 33 chrX 83031109 83031452 -83618844 - Lx9 LINE L1 -697 6947 6617 9 1218 363 331 5 112 chrX 83031481 83031678 -83618618 - B3A SINE B2 -9 186 11 9 1218 396 250 75 45 chrX 83031844 83031978 -83618318 + B1_Mur1 SINE Alu 1 138 -11 9 1218 624 102 0 0 chrX 83031982 83032080 -83618216 + (GA)n Simple_repeat Simple_repeat 1 98 0 9 1218 390 288 42 24 chrX 83032729 83032896 -83617400 + RMER15 LTR ERVL 357 526 -49 9 1218 2009 163 39 3 chrX 83032909 83033247 -83617049 - ORR1B1 LTR MaLR -24 370 21 9 1218 2970 327 39 16 chrX 83033369 83034536 -83615760 + RMER15-int LTR ERVL 61 1260 -3739 9 1218 1000 263 125 6 chrX 83034536 83034575 -83615721 - ORR1D2 LTR MaLR -2 368 329 1 1218 225 0 0 0 chrX 83034575 83034600 -83615696 + (CAAGG)n Simple_repeat Simple_repeat 1 25 0 1 1218 1000 263 125 6 chrX 83034600 83034889 -83615407 - ORR1D2 LTR MaLR -42 328 3 1 1218 2970 327 39 16 chrX 83034889 83034938 -83615358 + RMER15-int LTR ERVL 1261 1306 -3693 9 1218 3059 229 72 8 chrX 83034941 83035690 -83614606 + Lx8 LINE L1 6368 7164 -309 1 1218 1377 178 37 50 chrX 83035690 83036064 -83614232 + RMER16 LTR ERVK 1 533 0 1 1218 23 0 0 0 chrX 83036739 83036762 -83613534 + AT_rich Low_complexity Low_complexity 1 23 0 1 1218 7081 163 50 50 chrX 83036814 83037922 -83612374 + RMER16-int LTR ERVK 123 1262 -4144 1 1218 1157 111 66 11 chrX 83037922 83038105 -83612191 - B2_Mm2 SINE B2 -1 194 2 1 1218 7081 163 50 50 chrX 83038105 83038549 -83611747 + RMER16-int LTR ERVK 1263 1674 -3732 1 1218 8244 118 7 31 chrX 83039547 83040925 -83609371 + RMER16-int LTR ERVK 1660 3035 -3507 1 1218 2111 133 34 3 chrX 83040923 83041276 -83609020 + RMER16-int LTR ERVK 5043 5406 0 1 1218 1228 182 35 56 chrX 83041276 83041647 -83608649 + RMER16 LTR ERVK 1 533 0 1 1218 573 277 32 13 chrX 83041647 83041804 -83608492 + Lx8 LINE L1 7159 7318 -155 1 1218 351 121 0 0 chrX 83041804 83041862 -83608434 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 1218 348 273 194 16 chrX 83042382 83042568 -83607728 + ID_B1 SINE B4 2 220 -4 1 1218 530 280 24 43 chrX 83042570 83042734 -83607562 + RSINE1 SINE B4 3 163 -2 1 1218 499 301 0 0 chrX 83043451 83043564 -83606732 + B1F1 SINE Alu 8 120 -29 1 1218 820 227 43 16 chrX 83043602 83043790 -83606506 + B3A SINE B2 3 195 -3 1 1218 231 86 0 79 chrX 83043918 83043981 -83606315 + A-rich Low_complexity Low_complexity 1 58 0 1 1218 322 277 0 67 chrX 83044042 83044131 -83606165 + ID4_ SINE ID 1 83 0 1 1218 263 412 6 50 chrX 83044235 83044414 -83605882 + MLT1H LTR MaLR 4 174 -315 1 1218 314 330 26 17 chrX 83044640 83044757 -83605539 + MLT1H LTR MaLR 227 344 -205 1 1218 3399 33 2 0 chrX 83045007 83045402 -83604894 + MTA_Mm LTR MaLR 1 396 0 1 1218 231 349 0 0 chrX 83045548 83045614 -83604682 - ID4 SINE ID -1 82 17 1 1218 703 155 26 20 chrX 83045619 83045974 -83604322 + (TG)n Simple_repeat Simple_repeat 1 357 0 1 1218 531 342 31 6 chrX 83045991 83046150 -83604146 - RSINE1 SINE B4 0 165 3 1 1218 342 191 31 16 chrX 83046638 83046766 -83603530 + (TG)n Simple_repeat Simple_repeat 2 131 0 1 1218 294 301 82 0 chrX 83047226 83047299 -83602997 + B1F1 SINE Alu 1 79 -70 1 1218 794 258 108 0 chrX 83047630 83047816 -83602480 + B3 SINE B2 2 207 -9 1 1218 341 333 50 8 chrX 83047890 83048011 -83602285 - ID_B1 SINE B4 -19 205 80 1 1218 642 215 184 21 chrX 83048018 83048208 -83602088 - ID_B1 SINE B4 -2 222 2 1 1218 245 348 33 0 chrX 83048255 83048347 -83601949 - B1F SINE Alu -9 140 46 1 1218 325 203 142 92 chrX 83048932 83049073 -83601223 - B1F2 SINE Alu -1 148 1 1 1218 468 62 0 0 chrX 83049075 83049139 -83601157 + (TTA)n Simple_repeat Simple_repeat 2 65 0 1 1218 309 296 0 14 chrX 83049246 83049318 -83600978 - B1F2 SINE Alu -78 71 1 1 1218 255 93 0 0 chrX 83049320 83049363 -83600933 + (TTA)n Simple_repeat Simple_repeat 2 44 0 1 1218 469 252 151 0 chrX 83049610 83049729 -83600567 - ID_B1 SINE B4 -4 220 84 1 1218 401 149 21 0 chrX 83049809 83049903 -83600393 - Lx LINE L1 -3 6651 6556 1 1218 297 304 155 29 chrX 83049981 83050188 -83600108 - MIRc SINE MIR -34 234 2 1 1218 234 0 0 0 chrX 83050274 83050300 -83599996 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 1218 465 280 9 9 chrX 83050608 83050716 -83599580 - PB1D10 SINE Alu 0 117 10 1 1218 249 33 0 0 chrX 83050915 83050945 -83599351 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 1218 248 188 438 0 chrX 83050945 83051025 -83599271 - B1_Mur2 SINE Alu -13 136 22 1 1218 1426 193 26 172 chrX 83051250 83051750 -83598546 - RMER10A LTR ERVL 0 442 16 1 1218 463 252 38 19 chrX 83051809 83051914 -83598382 + PB1D7 SINE Alu 7 113 -7 1 1218 453 318 79 0 chrX 83051960 83052086 -83598210 + B1F1 SINE Alu 4 139 -10 1 1218 198 0 0 0 chrX 83052086 83052108 -83598188 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1 1218 232 276 0 65 chrX 83052111 83052173 -83598123 + RSINE1 SINE B4 3 60 -105 1 1218 585 76 0 0 chrX 83052220 83052299 -83597997 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 1218 255 309 9 102 chrX 83052347 83052455 -83597841 + PB1D7 SINE Alu 22 119 -1 1 1218 23 33 0 0 chrX 83052769 83052799 -83597497 + AT_rich Low_complexity Low_complexity 1 30 0 1 1218 552 223 9 0 chrX 83052826 83052938 -83597358 + PB1D9 SINE Alu 2 114 -6 1 1218 4030 157 20 4 chrX 83052985 83053744 -83596552 + Lx5 LINE L1 2188 2958 -2919 1 1218 1378 30 0 0 chrX 83053739 83053906 -83596390 - L1Md_F2 LINE L1 -295 6287 6121 1 1218 2188 57 3 0 chrX 83053906 83054188 -83596108 + L1Md_A LINE L1 6298 6580 -2 1 1218 275 119 15 92 chrX 83054188 83054253 -83596043 + Lx5 LINE L1 2951 3010 -2867 1 1218 30169 78 2 1 chrX 83054247 83059641 -83590655 + L1Md_F2 LINE L1 189 5586 -297 1 1218 8074 44 13 2 chrX 83059641 83060626 -83589670 + L1Md_F2 LINE L1 5587 6582 0 1 1218 14558 138 36 34 chrX 83060626 83060690 -83589606 + Lx5 LINE L1 2998 3051 -2826 1 1218 221 0 0 33 chrX 83060690 83060720 -83589576 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1218 14558 138 36 34 chrX 83060720 83061084 -83589212 + Lx5 LINE L1 3052 3412 -2465 1 1218 625 75 280 0 chrX 83061084 83061191 -83589105 + B1_Mus1 SINE Alu 1 137 -11 1 1218 207 0 0 0 chrX 83061191 83061214 -83589082 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1218 14558 138 36 34 chrX 83061214 83062649 -83587647 + Lx5 LINE L1 3413 4863 -1014 1 1218 1130 46 53 0 chrX 83062649 83062800 -83587496 + L1_Mus1 LINE L1 6408 6566 -1 1 1218 14558 184 43 18 chrX 83062800 83064890 -83585406 + Lx5 LINE L1 4864 7047 -3 1 1218 300 281 193 0 chrX 83065359 83065473 -83584823 + Lx8 LINE L1 6817 6952 -521 1 1218 611 315 5 42 chrX 83065635 83065847 -83584449 + ID_B1 SINE B4 4 207 -17 1 1218 351 0 0 0 chrX 83065885 83065924 -83584372 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1 1218 279 0 0 0 chrX 83065947 83065978 -83584318 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1218 1120 59 0 0 chrX 83065978 83066114 -83584182 - B1_Mus2 SINE Alu -11 136 1 1 1218 492 262 32 186 chrX 83066114 83066367 -83583929 - ID_B1 SINE B4 -10 214 1 1 1218 463 268 62 48 chrX 83066367 83066512 -83583784 - B1F1 SINE Alu -2 147 1 1 1218 352 359 70 0 chrX 83066518 83066646 -83583650 - ID_B1 SINE B4 -8 216 80 1 1218 433 367 14 0 chrX 83066658 83066805 -83583491 - B1F SINE Alu 0 149 1 1 1218 22 35 0 0 chrX 83067000 83067029 -83583267 + AT_rich Low_complexity Low_complexity 1 29 0 1 1218 851 285 109 42 chrX 83067074 83067542 -83582754 - MLT1D LTR MaLR -4 501 3 1 1218 395 38 19 0 chrX 83067758 83067811 -83582485 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1218 333 324 39 39 chrX 83067814 83067968 -83582328 - RSINE1 SINE B4 -10 155 2 1 1218 490 297 0 33 chrX 83067969 83068091 -83582205 - PB1D7 SINE Alu -2 118 1 1 1218 255 395 0 27 chrX 83067993 83068105 -83582191 - ID_B1 SINE B4 -48 176 68 1 1218 379 291 27 18 chrX 83068204 83068316 -83581980 + B1F1 SINE Alu 25 137 -12 1 1218 477 0 0 0 chrX 83068316 83068369 -83581927 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 1218 608 303 38 13 chrX 83068764 83068838 -83581458 + ID SINE ID 2 79 -145 1 1218 213 400 31 39 chrX 83068838 83068968 -83581328 + B1_Mur4 SINE Alu 1 129 -21 1 1218 651 179 0 0 chrX 83068979 83069119 -83581177 + GA-rich Low_complexity Low_complexity 2 141 0 1 1218 2610 93 8 3 chrX 83069124 83069502 -83580794 - L1_Mus4 LINE L1 0 6636 6257 1 1218 604 53 0 0 chrX 83069502 83069578 -83580718 + L1_Mus4 LINE L1 6199 6274 -362 1 1218 303 279 35 0 chrX 83069771 83069857 -83580439 - LTR41 LTR ERVL -607 161 73 1 1218 403 288 36 43 chrX 83069858 83069996 -83580300 + B1F SINE Alu 1 137 -12 1 1218 490 309 9 106 chrX 83070035 83070122 -83580174 + B4 SINE B4 5 84 -208 1 1218 786 92 13 60 chrX 83070122 83070273 -83580023 + L1_Mus3 LINE L1 6479 6622 -16 1 1218 207 0 0 0 chrX 83070274 83070297 -83579999 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1 1218 490 309 9 106 chrX 83070297 83070424 -83579872 + B4 SINE B4 85 200 -92 1 1218 193 109 43 0 chrX 83070540 83070586 -83579710 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 1 1218 243 0 0 0 chrX 83070948 83070975 -83579321 + (TGG)n Simple_repeat Simple_repeat 3 29 0 1 1218 490 312 21 0 chrX 83071111 83071255 -83579041 + B1F SINE Alu 3 149 0 1 1218 701 289 67 29 chrX 83071293 83071503 -83578793 - MTE2b LTR MaLR -52 327 110 1 1218 288 167 56 0 chrX 83071526 83071580 -83578716 - PB1D10 SINE Alu -13 104 48 1 1218 983 272 5 0 chrX 83071798 83072000 -83578296 - B3 SINE B2 0 216 14 1 1218 238 285 73 51 chrX 83072389 83072526 -83577770 + MER87 LTR ERV1 402 541 0 1 1218 183 80 0 0 chrX 83073001 83073026 -83577270 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1218 305 354 0 0 chrX 83074002 83074081 -83576215 + RSINE1 SINE B4 3 81 -84 1 1218 223 311 42 62 chrX 83074081 83074098 -83576198 + B3A SINE B2 2 95 -103 1 1218 506 241 98 111 chrX 83074232 83074529 -83575767 - RMER10A LTR ERVL -77 365 74 1 1218 350 261 38 92 chrX 83074529 83074660 -83575636 + RSINE1 SINE B4 2 125 -40 1 1218 413 269 47 60 chrX 83074794 83074944 -83575352 + B1F SINE Alu 1 148 -1 1 1218 546 236 138 0 chrX 83074950 83075073 -83575223 + B3 SINE B2 1 140 -76 1 1218 26 30 0 0 chrX 83075073 83075106 -83575190 + AT_rich Low_complexity Low_complexity 1 33 0 1 1218 415 322 19 57 chrX 83075130 83075288 -83575008 - B3 SINE B2 0 216 65 1 1218 317 145 0 0 chrX 83075290 83075352 -83574944 - MusHAL1 LINE L1 -1298 1414 1353 1 1218 611 60 12 0 chrX 83075372 83075456 -83574840 + (GA)n Simple_repeat Simple_repeat 2 86 0 1 1218 445 163 11 75 chrX 83075456 83075549 -83574747 - RMER17C LTR ERVK -321 89 3 1 1218 648 321 6 13 chrX 83075552 83075710 -83574586 - B3A SINE B2 -34 164 8 1 1218 408 40 0 0 chrX 83075771 83075821 -83574475 + (TC)n Simple_repeat Simple_repeat 2 51 0 1 1218 660 311 5 21 chrX 83075868 83076062 -83574234 - Lx8 LINE L1 -132 7341 7151 1 1218 7416 167 22 5 chrX 83076366 83076572 -83573724 + Lx5 LINE L1 4420 4631 -1249 2 1218 306 0 0 0 chrX 83076572 83076606 -83573690 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1218 7416 168 21 5 chrX 83076606 83077897 -83572399 + Lx5 LINE L1 4632 5946 -1104 2 1218 385 311 22 36 chrX 83078324 83078461 -83571835 - RSINE1 SINE B4 -28 137 3 2 1218 432 268 108 23 chrX 83078541 83078671 -83571625 - ID_B1 SINE B4 -2 222 82 2 1218 811 264 37 29 chrX 83078876 83079118 -83571178 + RMER12 LTR ERVK 938 1181 -141 2 1218 4834 164 31 26 chrX 83079181 83080229 -83570067 - Lx5 LINE L1 -452 6598 5544 2 1218 5224 106 39 59 chrX 83080244 83081022 -83569274 - Lx3C LINE L1 -57 6919 6160 2 1218 5531 39 30 3 chrX 83081022 83081696 -83568600 + L1Md_F2 LINE L1 5891 6582 0 2 1218 5224 106 39 59 chrX 83081696 83081851 -83568445 - Lx3C LINE L1 -817 6159 6006 2 1218 3927 173 70 63 chrX 83081846 83082477 -83567819 - Lx5 LINE L1 -566 5320 4645 2 1218 210 71 0 0 chrX 83082477 83082505 -83567791 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 1218 3927 173 70 63 chrX 83082505 83082740 -83567556 - Lx5 LINE L1 -1242 4644 4448 2 1218 1081 109 11 6 chrX 83082740 83082916 -83567380 + (TTTC)n Simple_repeat Simple_repeat 1 177 0 2 1218 3927 173 70 63 chrX 83082916 83083035 -83567261 - Lx5 LINE L1 -1439 4447 4329 2 1218 592 386 88 70 chrX 83083039 83083482 -83566814 + MLT2F LTR ERVL 154 604 -59 2 1218 291 259 210 0 chrX 83084532 83084613 -83565683 - PB1D10 SINE Alu -17 100 3 2 1218 363 209 15 0 chrX 83084984 83085051 -83565245 - tRNA-Ala-GCY_ tRNA tRNA -6 69 2 2 1218 219 276 34 17 chrX 83085054 83085113 -83565183 - ID SINE ID -142 82 23 2 1218 245 233 0 0 chrX 83085073 83085116 -83565180 - ID4 SINE ID -22 61 19 2 1218 388 0 39 0 chrX 83085132 83085184 -83565112 + (TTTTTG)n Simple_repeat Simple_repeat 6 59 0 2 1218 581 267 20 27 chrX 83085184 83085334 -83564962 - B1F1 SINE Alu 0 149 1 2 1218 261 234 45 30 chrX 83085349 83085415 -83564881 + B4A SINE B4 80 146 -146 2 1218 385 302 37 52 chrX 83085362 83085498 -83564798 + B1F SINE Alu 6 139 -10 2 1218 1210 199 55 12 chrX 83085572 83085897 -83564399 + Lx9 LINE L1 7303 7641 -3 2 1218 951 185 118 0 chrX 83085945 83086140 -83564156 - URR1A DNA MER1_type -8 218 1 2 1218 4958 37 2 0 chrX 83086155 83086745 -83563551 - L1Md_F3 LINE L1 -4 6580 5990 2 1218 1188 78 7 0 chrX 83086751 83086904 -83563392 + B2_Mm1t SINE B2 2 155 -38 2 1218 588 14 0 0 chrX 83086909 83086978 -83563318 + (GAAA)n Simple_repeat Simple_repeat 3 71 0 2 1218 368 240 82 10 chrX 83087088 83087185 -83563111 + PB1D7 SINE Alu 3 106 -14 2 1218 23 0 0 0 chrX 83087230 83087253 -83563043 + AT_rich Low_complexity Low_complexity 1 23 0 2 1218 2266 109 23 6 chrX 83087346 83087696 -83562600 - Lx2 LINE L1 0 6997 6642 2 1218 1003 126 12 6 chrX 83087716 83087876 -83562420 + Lx2 LINE L1 6480 6640 -357 2 1218 336 155 0 17 chrX 83087898 83087957 -83562339 + ORR1C2-int LTR MaLR 1432 1489 -20 2 1218 1352 143 64 159 chrX 83087960 83088176 -83562120 + ORR1C2 LTR MaLR 3 171 -213 2 1218 627 14 0 0 chrX 83088176 83088248 -83562048 + (TC)n Simple_repeat Simple_repeat 1 72 0 2 1218 1352 143 64 159 chrX 83088248 83088389 -83561907 + ORR1C2 LTR MaLR 172 325 -59 2 1218 7035 62 21 7 chrX 83088394 83089714 -83560582 - L1Md_F2 LINE L1 -13 6569 5225 2 1218 21123 112 40 4 chrX 83089690 83095483 -83554813 - L1Md_F2 LINE L1 0 6582 384 2 1218 387 287 34 17 chrX 83095483 83095600 -83554696 - MTEb LTR MaLR -4 375 257 2 1218 269 254 0 0 chrX 83095736 83095795 -83554501 - MTEb LTR MaLR -288 71 13 2 1218 413 230 60 0 chrX 83095799 83095899 -83554397 - B1_Mur2 SINE Alu 0 149 44 2 1218 848 61 9 0 chrX 83095944 83096059 -83554237 + (TTC)n Simple_repeat Simple_repeat 2 117 0 2 1218 249 33 0 0 chrX 83096059 83096089 -83554207 + (TTA)n Simple_repeat Simple_repeat 2 31 0 2 1218 243 0 0 0 chrX 83096089 83096116 -83554180 + (ATG)n Simple_repeat Simple_repeat 1 27 0 2 1218 202 382 132 0 chrX 83096122 83096274 -83554022 + MIR SINE MIR 26 197 -65 2 1218 425 252 144 10 chrX 83096294 83096398 -83553898 - B1F1 SINE Alu -8 141 24 2 1218 420 323 31 16 chrX 83096623 83096752 -83553544 - ID_B1 SINE B4 0 224 94 2 1218 663 264 6 47 chrX 83096819 83096990 -83553306 - RSINE1 SINE B4 0 165 2 2 1218 390 21 0 0 chrX 83097018 83097065 -83553231 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1218 729 206 86 12 chrX 83097082 83097244 -83553052 - ORR1C2 LTR MaLR -2 382 209 2 1218 441 84 0 0 chrX 83097258 83097329 -83552967 + (CAGAGA)n Simple_repeat Simple_repeat 2 72 0 2 1218 4956 113 11 4 chrX 83097401 83098131 -83552165 + Lx LINE L1 5914 6648 -6 2 1218 864 148 6 6 chrX 83098188 83098351 -83551945 + Lx2 LINE L1 6835 6997 0 2 1218 474 114 0 0 chrX 83098394 83098473 -83551823 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 2 1218 489 260 0 19 chrX 83099047 83099153 -83551143 - PB1D10 SINE Alu -1 116 13 2 1218 441 0 0 0 chrX 83099160 83099209 -83551087 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 1218 270 0 0 0 chrX 83099209 83099238 -83551058 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1218 347 325 0 0 chrX 83099358 83099435 -83550861 - ID4 SINE ID -1 82 6 2 152 546 304 108 33 chrX 83099518 83099948 -83550348 + Lx8 LINE L1 6961 7443 -30 2 1219 254 350 19 39 chrX 83099976 83100080 -83550216 - PB1D10 SINE Alu -6 111 10 2 1219 1238 253 70 10 chrX 83100127 83100514 -83549782 + Lx7 LINE L1 7023 7432 -264 2 1219 258 32 0 0 chrX 83100530 83100561 -83549735 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1219 254 297 11 21 chrX 83100688 83100781 -83549515 + Charlie1b DNA MER1_type 417 508 -15 2 1219 484 273 0 18 chrX 83100802 83100914 -83549382 + PB1D7 SINE Alu 10 119 -1 2 1219 598 294 14 0 chrX 83101017 83101160 -83549136 + RSINE1 SINE B4 16 160 -5 2 1219 507 95 0 0 chrX 83101173 83101247 -83549049 + (TAGA)n Simple_repeat Simple_repeat 1 74 0 2 1219 308 333 53 18 chrX 83101276 83101389 -83548907 + PB1D10 SINE Alu 1 117 0 2 1219 567 289 24 42 chrX 83101509 83101675 -83548621 + RSINE1 SINE B4 3 165 0 2 1219 468 0 0 0 chrX 83101694 83101746 -83548550 + (TCCC)n Simple_repeat Simple_repeat 1 52 0 2 1219 1144 50 19 0 chrX 83101746 83101905 -83548391 + (TTTC)n Simple_repeat Simple_repeat 1 162 0 2 1219 1227 83 0 0 chrX 83101913 83102082 -83548214 + (TTTCC)n Simple_repeat Simple_repeat 4 172 0 2 1219 234 0 0 0 chrX 83102084 83102110 -83548186 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 2 1219 647 209 22 22 chrX 83102110 83102247 -83548049 - B1_Mur2 SINE Alu -11 138 2 2 1219 25 0 0 0 chrX 83102249 83102274 -83548022 + AT_rich Low_complexity Low_complexity 1 25 0 2 1219 220 284 43 29 chrX 83102523 83102592 -83547704 + BC1_Mm scRNA scRNA 6 75 -77 2 1219 4885 86 3 3 chrX 83102910 83103564 -83546732 + L1_Mus3 LINE L1 5984 6637 -1 2 1219 26 30 0 0 chrX 83103642 83103675 -83546621 + AT_rich Low_complexity Low_complexity 1 33 0 2 1219 338 175 12 0 chrX 83103690 83103770 -83546526 + CT-rich Low_complexity Low_complexity 3 83 0 2 1219 1337 202 82 42 chrX 83103772 83104128 -83546168 + ORR1D2 LTR MaLR 1 370 0 2 1219 285 282 25 25 chrX 83104137 83104217 -83546079 - ID4_ SINE ID -2 81 2 2 1219 949 153 174 0 chrX 83104510 83104700 -83545596 - URR1B DNA MER1_type -2 223 1 2 1219 268 295 115 0 chrX 83104811 83104889 -83545407 + ID_B1 SINE B4 84 170 -54 2 1219 249 288 103 103 chrX 83104889 83104926 -83545370 + PB1D10 SINE Alu 3 117 0 2 1219 606 336 42 46 chrX 83105276 83105560 -83544736 + B4A SINE B4 2 284 -8 2 1219 478 304 41 18 chrX 83105807 83106025 -83544271 - ID_B1 SINE B4 -1 223 1 2 1219 1366 86 0 26 chrX 83106148 83106340 -83543956 - B2_Mm2 SINE B2 -7 188 2 2 1219 439 128 11 11 chrX 83106551 83106638 -83543658 + (TA)n Simple_repeat Simple_repeat 2 88 0 2 1219 215 333 123 0 chrX 83106638 83106719 -83543577 - PB1 SINE Alu -19 108 18 2 1219 227 209 23 0 chrX 83106801 83106844 -83543452 + ID4 SINE ID 39 82 -1 2 1219 1208 172 5 9 chrX 83106927 83107138 -83543158 + MTC LTR MaLR 1 210 -211 2 1219 3568 66 2 0 chrX 83107138 83107592 -83542704 + L1_Mus1 LINE L1 6112 6566 -1 2 1219 814 234 25 83 chrX 83107592 83107622 -83542674 + MTC LTR MaLR 193 227 -169 2 1219 1275 111 0 16 chrX 83107647 83107840 -83542456 + MTC LTR MaLR 223 412 -9 2 1219 246 287 11 54 chrX 83107885 83107977 -83542319 - 7SK RNA RNA -81 250 163 2 1219 715 222 48 0 chrX 83108144 83108311 -83541985 + Lx8 LINE L1 6892 7066 -407 2 1219 855 78 0 0 chrX 83108702 83108831 -83541465 + (CA)n Simple_repeat Simple_repeat 2 130 0 2 1219 1594 31 0 0 chrX 83109521 83109712 -83540584 + L1Md_A LINE L1 6390 6580 -2 2 1219 215 219 0 0 chrX 83109845 83109886 -83540410 + CT-rich Low_complexity Low_complexity 2 42 0 2 1219 801 163 7 41 chrX 83109888 83110035 -83540261 - B1_Mus1 SINE Alu -4 144 3 2 1219 312 231 102 37 chrX 83110156 83110264 -83540032 + PB1D10 SINE Alu 1 115 -2 2 1219 228 293 107 50 chrX 83110581 83110721 -83539575 + RMER15 LTR ERVL 425 572 -3 2 1219 333 0 0 0 chrX 83110721 83110758 -83539538 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1219 533 62 25 0 chrX 83110758 83110839 -83539457 + (CAGAGA)n Simple_repeat Simple_repeat 6 88 0 2 1219 242 352 116 39 chrX 83110977 83111236 -83539060 + RSINE1 SINE B4 3 287 -5 2 1219 342 338 48 62 chrX 83112736 83112766 -83537530 + B1F SINE Alu 2 144 -5 2 1219 435 322 9 0 chrX 83112766 83112881 -83537415 + ID_B1 SINE B4 104 219 -5 2 1219 455 214 0 109 chrX 83112894 83113004 -83537292 + ID_B1 SINE B4 117 214 -10 2 1219 489 34 0 0 chrX 83113055 83113114 -83537182 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 1219 429 203 29 22 chrX 83113173 83113274 -83537022 + B1F SINE Alu 15 113 -36 2 1219 874 248 54 36 chrX 83113415 83113637 -83536659 - ORR1D2 LTR MaLR 0 370 145 2 1219 311 279 0 0 chrX 83113740 83113808 -83536488 - ID4_ SINE ID -13 70 3 2 1219 21 0 0 0 chrX 83113808 83113829 -83536467 + AT_rich Low_complexity Low_complexity 1 21 0 3 1219 231 242 81 0 chrX 83113832 83113845 -83536451 - ID_B1 SINE B4 -68 156 90 3 1219 242 224 0 0 chrX 83113845 83113894 -83536402 - B1F SINE Alu -92 57 9 3 1219 450 277 20 10 chrX 83113916 83114018 -83536278 - PB1D7 SINE Alu -8 112 10 3 1219 394 315 7 78 chrX 83114070 83114211 -83536085 + B1F SINE Alu 19 149 0 3 1219 508 272 72 72 chrX 83114237 83114459 -83535837 + B4A SINE B4 71 292 0 3 1219 335 171 116 74 chrX 83114479 83114574 -83535722 + HAL1-3A_ME LINE L1 1975 2073 -785 3 1219 498 200 8 84 chrX 83115041 83115172 -83535124 - B1F2 SINE Alu -2 147 27 3 1219 351 281 128 26 chrX 83115166 83115283 -83535013 - B1F SINE Alu -18 129 1 3 1219 211 300 20 0 chrX 83116068 83116118 -83534178 - ID4_ SINE ID -3 80 30 3 1219 348 83 0 0 chrX 83116254 83116302 -83533994 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 3 1219 272 205 282 0 chrX 83116312 83116390 -83533906 - PB1D7 SINE Alu -17 103 4 3 1219 680 289 0 14 chrX 83116551 83116695 -83533601 - B1F2 SINE Alu -1 148 7 3 1219 342 290 93 0 chrX 83117052 83117159 -83533137 - PB1D10 SINE Alu 0 117 1 3 1219 273 57 0 0 chrX 83117200 83117235 -83533061 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1219 444 350 7 7 chrX 83117249 83117387 -83532909 - B1F1 SINE Alu -10 139 2 3 1219 325 292 51 7 chrX 83117999 83118137 -83532159 - B1_Mur2 SINE Alu -1 148 5 3 1219 718 165 0 93 chrX 83118227 83118367 -83531929 + B1_Mur3 SINE Alu 16 142 -7 3 1219 237 323 38 12 chrX 83118478 83118638 -83531658 - L1MC4 LINE L1 -96 7946 7783 3 1219 607 280 0 0 chrX 83118661 83118804 -83531492 + B1F SINE Alu 1 143 -6 3 1219 22 0 0 0 chrX 83118874 83118896 -83531400 + AT_rich Low_complexity Low_complexity 1 22 0 3 1219 317 345 17 26 chrX 83119147 83119263 -83531033 - PB1D10 SINE Alu 0 117 3 3 1219 411 279 20 69 chrX 83119351 83119555 -83530741 + L1M2 LINE L1 5411 5604 -696 3 1219 318 342 0 0 chrX 83119563 83119639 -83530657 + PB1D7 SINE Alu 4 79 -41 3 1219 604 272 27 36 chrX 83119673 83119898 -83530398 + L1_Rod LINE L1 5552 5774 -73 3 1219 861 281 82 8 chrX 83120165 83120420 -83529876 + B4 SINE B4 1 274 -18 3 1219 258 32 0 0 chrX 83120570 83120601 -83529695 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1219 440 254 34 88 chrX 83120604 83120751 -83529545 - B1F2 SINE Alu -8 141 3 3 1219 542 246 57 43 chrX 83120775 83120915 -83529381 - ID_B1 SINE B4 0 224 83 3 1219 557 297 0 0 chrX 83120911 83121029 -83529267 + ID_B1 SINE B4 91 208 -16 3 1219 263 289 76 76 chrX 83120912 83121043 -83529253 + FAM SINE Alu 146 276 -35 3 1219 459 293 78 0 chrX 83121256 83121372 -83528924 - ID_B1 SINE B4 0 224 100 3 1219 353 320 54 60 chrX 83121265 83121431 -83528865 + YREP_Mm Unknown Unknown 186 350 -1462 3 1219 206 275 29 14 chrX 83122839 83122909 -83527387 + CT-rich Low_complexity Low_complexity 2 72 0 3 1219 288 289 50 30 chrX 83122914 83123014 -83527282 - PB1D10 SINE Alu -11 106 5 3 1219 319 274 35 35 chrX 83123056 83123143 -83527153 - B1F SINE Alu -9 140 54 3 1219 571 233 90 0 chrX 83123215 83123348 -83526948 + MER58A DNA MER1_type 47 191 -33 3 1219 465 258 94 0 chrX 83123452 83123580 -83526716 - B1F2 SINE Alu 0 149 10 3 1219 345 24 0 0 chrX 83123927 83123969 -83526327 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1219 564 15 0 0 chrX 83123972 83124037 -83526259 + (GA)n Simple_repeat Simple_repeat 1 65 0 3 1219 21 0 0 0 chrX 83124153 83124174 -83526122 + AT_rich Low_complexity Low_complexity 1 21 0 3 1219 613 309 0 0 chrX 83124381 83124530 -83525766 - RSINE1 SINE B4 -12 153 5 3 1219 468 279 9 0 chrX 83124546 83124657 -83525639 - PB1D7 SINE Alu -8 112 1 3 1219 212 335 93 51 chrX 83125196 83125218 -83525078 - B4A SINE B4 -46 246 201 3 1219 221 374 114 0 chrX 83125218 83125341 -83524955 - B1_Mus1 SINE Alu -1 147 11 3 1219 212 335 93 51 chrX 83125341 83125432 -83524864 - B4A SINE B4 -46 200 1 3 1219 306 386 49 21 chrX 83125626 83125769 -83524527 - PB1D10 SINE Alu -1 147 1 3 1219 180 0 0 0 chrX 83126400 83126420 -83523876 + (TTG)n Simple_repeat Simple_repeat 1 20 0 3 1219 299 275 14 103 chrX 83126947 83127093 -83523203 - BC1_Mm scRNA scRNA -18 134 2 3 1219 195 42 0 0 chrX 83127405 83127429 -83522867 + (TCTCCC)n Simple_repeat Simple_repeat 5 28 0 3 1219 332 342 62 15 chrX 83127470 83127634 -83522662 - L1MA4 LINE L1 -417 5883 5719 3 1219 3460 28 2 0 chrX 83127634 83128029 -83522267 + MTA_Mm LTR MaLR 1 396 0 3 1219 332 342 62 15 chrX 83128029 83128188 -83522108 - L1MA4 LINE L1 -582 5718 5546 3 1219 693 223 6 67 chrX 83128188 83128366 -83521930 - MTEa LTR MaLR 0 379 213 3 1219 285 297 0 0 chrX 83128361 83128425 -83521871 - MTEa LTR MaLR -315 64 1 3 1219 330 254 39 23 chrX 83128427 83128556 -83521740 - L1_Mur3 LINE L1 -388 5492 5362 3 1219 1357 71 22 0 chrX 83128591 83128774 -83521522 - B2_Mm2 SINE B2 -8 187 1 3 1219 875 170 7 20 chrX 83128803 83128953 -83521343 - B1_Mur4 SINE Alu -1 149 2 3 1219 432 0 0 0 chrX 83129034 83129082 -83521214 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1219 363 44 0 0 chrX 83129375 83129420 -83520876 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 3 1219 223 197 265 29 chrX 83129490 83129558 -83520738 - B4A SINE B4 -207 85 2 3 1219 21 36 0 0 chrX 83129579 83129607 -83520689 + AT_rich Low_complexity Low_complexity 1 28 0 3 1219 2411 162 32 10 chrX 83130574 83130986 -83519310 - MTC LTR MaLR 0 421 1 3 1219 226 233 66 16 chrX 83131493 83131554 -83518742 - MER82 DNA MER2_type -46 607 544 3 1219 263 392 144 4 chrX 83132820 83133076 -83517220 + L2c LINE L2 3096 3387 0 3 1219 560 307 29 0 chrX 83134614 83134751 -83515545 - ID_B1 SINE B4 0 224 84 3 1219 234 341 34 11 chrX 83135101 83135190 -83515106 + MER58B DNA MER1_type 1 91 -250 3 1219 616 211 6 75 chrX 83135223 83135382 -83514914 - B1_Mur2 SINE Alu 0 149 2 3 1219 33 0 0 0 chrX 83135385 83135418 -83514878 + AT_rich Low_complexity Low_complexity 1 33 0 3 1219 285 29 0 0 chrX 83135504 83135538 -83514758 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 3 1219 325 310 44 73 chrX 83135624 83135760 -83514536 + MER58B DNA MER1_type 207 338 -3 3 1219 551 220 18 112 chrX 83135996 83136017 -83514279 - RMER13B LTR ERVK -755 153 133 3 1219 333 0 0 0 chrX 83136017 83136054 -83514242 + (GAGTG)n Simple_repeat Simple_repeat 1 37 0 3 1219 551 220 18 112 chrX 83136054 83136201 -83514095 - RMER13B LTR ERVK -776 132 3 3 1219 228 200 0 0 chrX 83136417 83136462 -83513834 + L1Md_F LINE L1 295 339 -6180 3 1219 308 256 43 22 chrX 83136467 83136559 -83513737 + MTEb LTR MaLR 273 366 -13 3 1219 29864 81 14 10 chrX 83136565 83141547 -83508749 + L1Md_F2 LINE L1 586 5585 -298 3 1219 7330 73 18 3 chrX 83141548 83142525 -83507771 + L1Md_F2 LINE L1 5587 6578 -4 3 1219 2021 223 33 69 chrX 83142535 83143118 -83507178 - Lx2B LINE L1 -15 6985 6424 3 1219 201 256 0 0 chrX 83143150 83143193 -83507103 + GA-rich Low_complexity Low_complexity 3 45 0 3 1219 291 319 0 43 chrX 83143474 83143638 -83506658 + T-rich Low_complexity Low_complexity 2 158 0 3 1219 473 260 42 103 chrX 83144253 83144467 -83505829 - RMER15 LTR ERVL -14 561 361 3 1219 285 301 80 36 chrX 83144749 83144973 -83505323 + L1ME3 LINE L1 5763 5996 -166 3 1219 3299 46 5 0 chrX 83145078 83145472 -83504824 - MTA_Mm LTR MaLR 0 396 1 3 1219 240 262 82 0 chrX 83145589 83145650 -83504646 - ID4 SINE ID -9 74 9 3 1219 263 224 152 10 chrX 83145668 83145767 -83504529 - PB1D10 SINE Alu 0 117 5 3 1219 702 0 0 0 chrX 83145783 83145861 -83504435 + (TTTC)n Simple_repeat Simple_repeat 3 80 0 3 1219 234 100 0 24 chrX 83145865 83145906 -83504390 + B1_Mm SINE Alu 108 147 0 3 1219 2674 52 0 3 chrX 83145910 83146241 -83504055 - L1_Mus1 LINE L1 -9 6558 6229 3 1219 3096 55 7 0 chrX 83146241 83146644 -83503652 + L1_Mus1 LINE L1 5802 6207 -360 3 1219 361 319 51 105 chrX 83147081 83147408 -83502888 + RSINE1 SINE B4 3 281 -11 3 1219 21 0 0 0 chrX 83147849 83147870 -83502426 + AT_rich Low_complexity Low_complexity 1 21 0 3 1219 761 39 10 0 chrX 83147897 83147999 -83502297 + Lx3_Mus LINE L1 4854 4956 -930 3 1219 9198 94 14 10 chrX 83147999 83149763 -83500533 + Lx3_Mus LINE L1 5227 6995 -14 3 1219 396 0 0 0 chrX 83150076 83150120 -83500176 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 1219 207 0 0 0 chrX 83150128 83150151 -83500145 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 3 1219 445 234 0 0 chrX 83150180 83150257 -83500039 - PB1D10 SINE Alu -31 86 10 3 1219 345 305 10 21 chrX 83150257 83150277 -83500019 - ID_B1 SINE B4 -57 167 72 3 1219 329 229 114 0 chrX 83150283 83150388 -83499908 - PB1D10 SINE Alu 0 117 1 3 1219 2333 70 3 25 chrX 83150428 83150779 -83499517 - L1_Mus1 LINE L1 0 6567 6251 3 1219 466 52 0 0 chrX 83150780 83150838 -83499458 + B2_Mm2 SINE B2 24 81 -114 3 1219 477 0 0 0 chrX 83151386 83151439 -83498857 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 3 1219 791 170 11 0 chrX 83151444 83151595 -83498701 + Lx4A LINE L1 6730 6885 -173 3 1219 392 324 10 0 chrX 83151789 83151891 -83498405 - MER44A DNA MER2_type -1 338 236 3 1219 767 85 9 0 chrX 83151967 83152073 -83498223 - B2_Mm2 SINE B2 -88 107 1 3 1219 216 0 0 0 chrX 83152079 83152103 -83498193 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 1219 478 305 18 74 chrX 83152159 83152322 -83497974 - RSINE1 SINE B4 0 165 12 3 1219 402 279 126 38 chrX 83152329 83152512 -83497784 - MER44A DNA MER2_type -128 211 13 3 1219 1192 279 32 19 chrX 83152654 83153026 -83497270 - Lx8 LINE L1 -902 6571 6195 3 1219 679 191 56 7 chrX 83153099 83153241 -83497055 - B1_Mur4 SINE Alu 0 150 2 4 1219 383 284 11 0 chrX 83154260 83154355 -83495941 + B3 SINE B2 2 97 -119 4 1219 24 32 0 0 chrX 83154510 83154541 -83495755 + AT_rich Low_complexity Low_complexity 1 31 0 4 1219 243 195 49 0 chrX 83154628 83154669 -83495627 + MTEa LTR MaLR 49 91 -288 4 1219 5340 40 12 1 chrX 83154701 83155352 -83494944 + L1Md_F2 LINE L1 5925 6582 0 4 1219 561 30 0 0 chrX 83155443 83155510 -83494786 + (TTTC)n Simple_repeat Simple_repeat 3 69 0 4 1219 3041 61 36 12 chrX 83155539 83155953 -83494343 - L1Md_F3 LINE L1 -1 6583 6160 4 1219 323 206 55 38 chrX 83156056 83156158 -83494138 + MTEa LTR MaLR 273 368 -2 4 1219 21 82 0 0 chrX 83156622 83156671 -83493625 + AT_rich Low_complexity Low_complexity 1 49 0 4 1219 229 282 0 13 chrX 83156743 83156822 -83493474 - Lx8 LINE L1 -3 7470 7393 4 1219 397 299 8 0 chrX 83157329 83157446 -83492850 + PB1D7 SINE Alu 2 119 -1 4 1219 297 75 0 0 chrX 83157446 83157486 -83492810 + (GAAA)n Simple_repeat Simple_repeat 1 40 0 4 1219 211 28 27 27 chrX 83157479 83157516 -83492780 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 4 1219 369 0 0 0 chrX 83157840 83157881 -83492415 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1219 572 349 25 20 chrX 83158061 83158263 -83492033 - ID_B1 SINE B4 -14 210 8 4 1219 272 366 59 72 chrX 83158286 83158299 -83491997 - B4 SINE B4 -73 219 176 4 1219 558 268 0 0 chrX 83158299 83158411 -83491885 - B1F SINE Alu -33 116 5 4 1219 272 366 59 72 chrX 83158411 83158439 -83491857 - B4 SINE B4 -73 175 69 4 1219 406 243 26 43 chrX 83158829 83158945 -83491351 - PB1D10 SINE Alu -1 116 3 4 1219 372 351 23 15 chrX 83159290 83159423 -83490873 - B1F SINE Alu -15 134 1 4 1219 282 299 82 0 chrX 83159753 83159900 -83490396 + L1MA10 LINE L1 6176 6334 0 4 1219 1389 66 0 6 chrX 83160026 83160208 -83490088 + B2_Mm2 SINE B2 1 181 -14 4 1219 1105 67 0 12 chrX 83160334 83160501 -83489795 - L1_Mur1 LINE L1 -2473 3413 3249 4 1219 5714 130 55 21 chrX 83160501 83161459 -83488837 + Lx3B LINE L1 5980 6970 -3 4 1219 1426 258 116 2 chrX 83161873 83162269 -83488027 - Lx5 LINE L1 -155 6895 6455 4 1219 1028 226 75 17 chrX 83162298 83162590 -83487706 - Lx3C LINE L1 -4 6972 6664 4 1219 758 231 34 5 chrX 83162640 83162857 -83487439 - Lx5 LINE L1 -597 6453 6267 4 1219 608 255 0 0 chrX 83163102 83163208 -83487088 - ID_B1 SINE B4 -37 187 82 4 1219 485 351 26 5 chrX 83163294 83163483 -83486813 - MTEb-int LTR MaLR -1386 194 2 4 1219 372 242 55 68 chrX 83163486 83163640 -83486656 - MTEb LTR MaLR 0 379 220 4 1219 1096 221 0 10 chrX 83163669 83163866 -83486430 - B3 SINE B2 -1 215 21 4 1219 372 278 46 9 chrX 83163877 83163986 -83486310 - PB1D10 SINE Alu -4 113 1 4 1219 766 251 31 20 chrX 83164335 83164530 -83485766 + B3A SINE B2 2 198 0 4 1219 801 263 35 17 chrX 83164558 83164732 -83485564 + B3 SINE B2 1 177 -39 4 1219 639 0 0 0 chrX 83164735 83164806 -83485490 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 1219 930 280 144 21 chrX 83165063 83165494 -83484802 + Lx9 LINE L1 6358 6841 -803 4 1219 326 247 14 0 chrX 83166174 83166247 -83484049 - ID4_ SINE ID -9 74 1 4 1219 631 325 23 37 chrX 83166259 83166473 -83483823 - ID_B1 SINE B4 0 224 14 4 1219 339 372 114 67 chrX 83166632 83167182 -83483114 + MLT1K LTR MaLR 19 594 -1 4 1219 911 173 147 0 chrX 83167219 83167416 -83482880 - URR1A DNA MER1_type 0 226 1 4 1219 303 96 0 0 chrX 83168237 83168289 -83482007 + (A)n Simple_repeat Simple_repeat 1 52 0 4 1219 197 372 50 14 chrX 83168315 83168454 -83481842 - MIRb SINE MIR -62 206 63 4 1219 220 256 24 35 chrX 83168655 83168740 -83481556 + T-rich Low_complexity Low_complexity 2 85 0 4 1219 1709 57 0 13 chrX 83169201 83169433 -83480863 + L1Md_F3 LINE L1 6353 6581 -3 4 1219 194 62 0 30 chrX 83170592 83170625 -83479671 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 1219 2144 35 0 0 chrX 83171243 83171500 -83478796 - L1Md_A LINE L1 0 6582 6326 4 1219 436 266 32 19 chrX 83171573 83171730 -83478566 - Lx6 LINE L1 -19 7441 7283 4 1219 902 236 78 5 chrX 83171728 83171975 -83478321 - Lx6 LINE L1 -438 7022 6567 4 1219 1071 69 0 0 chrX 83172686 83172831 -83477465 + (GA)n Simple_repeat Simple_repeat 2 146 0 4 1219 776 222 28 38 chrX 83172891 83173102 -83477194 - B3 SINE B2 -7 209 1 4 1219 636 161 107 25 chrX 83173242 83173363 -83476933 + B1_Mur1 SINE Alu 5 135 -14 4 1219 469 227 66 16 chrX 83173615 83173736 -83476560 - B1F2 SINE Alu -1 148 22 4 1219 8080 27 3 0 chrX 83173812 83175030 -83475266 - L1Md_T LINE L1 -3 6579 5360 4 1219 555 289 78 5 chrX 83175037 83175228 -83475068 - B3 SINE B2 -10 206 2 4 1219 387 0 0 0 chrX 83175234 83175277 -83475019 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 4 1219 367 372 72 53 chrX 83175426 83175747 -83474549 + MLT1H LTR MaLR 35 361 -188 4 1219 601 98 0 0 chrX 83177691 83177773 -83472523 + B1_Mus2 SINE Alu 2 83 -64 4 1219 401 212 0 83 chrX 83177692 83177774 -83472522 + MT2B LTR ERVL 167 241 -360 4 1219 384 22 0 0 chrX 83177774 83177819 -83472477 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 1219 401 212 0 83 chrX 83177819 83177844 -83472452 + MT2B LTR ERVL 242 265 -336 4 1219 241 422 53 60 chrX 83177827 83178127 -83472169 - LTR16E1 LTR ERVL -152 386 89 4 1219 1119 56 7 7 chrX 83179020 83179163 -83471133 + B1_Mus2 SINE Alu 5 147 0 4 1219 853 193 0 0 chrX 83179283 83179428 -83470868 + B1_Mur4 SINE Alu 6 150 0 4 1219 940 329 98 28 chrX 83180023 83180495 -83469801 - MLT1D LTR MaLR 0 505 1 4 1219 1004 260 103 0 chrX 83180707 83181065 -83469231 - Lx8 LINE L1 -2 7471 7077 4 1219 345 312 62 0 chrX 83181062 83181174 -83469122 - Lx8 LINE L1 -519 6954 6836 4 1219 269 377 0 0 chrX 83181187 83181264 -83469032 - ID4_ SINE ID -6 77 1 4 1219 531 299 118 11 chrX 83182395 83182581 -83467715 - B3 SINE B2 -8 208 3 4 1219 245 288 0 0 chrX 83182725 83182788 -83467508 - ID4 SINE ID -62 90 28 4 1219 223 269 76 13 chrX 83182734 83182813 -83467483 - ID SINE ID -140 84 1 4 1219 633 250 15 0 chrX 83182866 83183002 -83467294 + B1_Mur3 SINE Alu 3 140 -9 4 1219 386 270 139 0 chrX 83183044 83183159 -83467137 + ID_B1 SINE B4 93 223 -1 4 1219 261 0 0 0 chrX 83183435 83183464 -83466832 + (TTTTG)n Simple_repeat Simple_repeat 4 32 0 4 1219 846 101 27 0 chrX 83183515 83183663 -83466633 + (TCTA)n Simple_repeat Simple_repeat 1 152 0 4 1219 414 262 294 25 chrX 83183783 83184150 -83466146 + RMER20B LTR ERVK 124 589 -38 4 1219 893 320 42 52 chrX 83184174 83184370 -83465926 + MTE2a LTR MaLR 1 189 -190 4 1219 602 60 0 12 chrX 83184370 83184454 -83465842 + (CATA)n Simple_repeat Simple_repeat 4 86 0 4 1219 893 320 42 52 chrX 83184454 83184640 -83465656 + MTE2a LTR MaLR 190 379 0 4 1219 252 338 58 22 chrX 83185015 83185154 -83465142 + MER58B DNA MER1_type 194 337 -4 4 1219 234 337 78 48 chrX 83185795 83185898 -83464398 + MIRb SINE MIR 21 129 -139 4 1219 248 356 41 65 chrX 83186037 83186160 -83464136 + MLT1A LTR MaLR 1 120 -254 4 1219 305 291 0 37 chrX 83186243 83186325 -83463971 - PB1D10 SINE Alu 0 117 39 4 1219 327 282 120 8 chrX 83186370 83186495 -83463801 + MER45A DNA Tip100 6 144 -34 4 1219 355 0 19 39 chrX 83187003 83187055 -83463241 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 4 1219 753 201 0 32 chrX 83187062 83187216 -83463080 - B1_Mur4 SINE Alu -1 149 1 4 1219 332 304 17 35 chrX 83187333 83187449 -83462847 - PB1D10 SINE Alu 0 117 4 4 1219 2365 213 22 45 chrX 83187581 83187797 -83462499 - Lx6 LINE L1 -5 7455 7252 4 1219 315 0 0 0 chrX 83187797 83187832 -83462464 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 4 1219 2365 213 22 45 chrX 83187832 83188165 -83462131 - Lx6 LINE L1 -209 7251 6920 4 1219 2681 242 72 35 chrX 83188205 83189049 -83461247 - Lx6 LINE L1 -746 6714 5840 4 1219 2629 167 35 9 chrX 83189037 83189635 -83460661 - Lx2B LINE L1 -1015 5985 5369 4 1219 5257 167 30 31 chrX 83189646 83190403 -83459893 - Lx2B LINE L1 -1704 4176 3429 4 1219 510 46 0 0 chrX 83190403 83190468 -83459828 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 4 1219 5257 167 30 31 chrX 83190468 83190893 -83459403 - Lx2B LINE L1 -2452 3428 2997 4 1219 4684 221 65 41 chrX 83190985 83193161 -83457135 - Lx2B LINE L1 -3550 2330 102 4 1219 368 281 270 0 chrX 83193290 83193475 -83456821 + MIR SINE MIR 28 262 0 4 1219 913 322 44 16 chrX 83193539 83193844 -83456452 + MLT1A0 LTR MaLR 12 325 -40 4 1219 1982 171 7 59 chrX 83193844 83194268 -83456028 + RMER17C LTR ERVK 1 402 -8 4 1219 232 243 365 79 chrX 83194597 83194723 -83455573 - B3A SINE B2 -28 188 27 4 1219 1355 126 0 13 chrX 83194724 83194950 -83455346 - Lx2 LINE L1 0 6997 6775 4 1219 6527 109 4 9 chrX 83194949 83195943 -83454353 - Lx2 LINE L1 -353 6644 5656 4 1219 439 134 0 0 chrX 83195944 83196011 -83454285 + Lx2 LINE L1 5610 5676 -960 4 1219 25 75 0 0 chrX 83196501 83196554 -83453742 + AT_rich Low_complexity Low_complexity 1 53 0 4 1219 441 0 0 0 chrX 83198259 83198308 -83451988 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1219 313 369 69 124 chrX 83198424 83198771 -83451525 - ORR1E LTR MaLR -31 328 1 4 1219 288 329 73 103 chrX 83198837 83198860 -83451436 + MLT1H LTR MaLR 327 347 -232 4 1219 438 53 0 0 chrX 83198860 83198917 -83451379 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 1219 336 325 96 63 chrX 83198917 83199154 -83451142 + MLT1H LTR MaLR 327 579 0 4 1219 351 320 0 55 chrX 83199450 83199559 -83450737 - B1F2 SINE Alu -46 103 1 4 1219 415 315 18 18 chrX 83200120 83200230 -83450066 - MTEa LTR MaLR -9 370 261 4 1219 669 254 34 54 chrX 83200349 83200553 -83449743 - Lx5 LINE L1 -1 7049 6850 4 1219 326 356 126 8 chrX 83200553 83200697 -83449599 - MTEa LTR MaLR -214 156 4 4 1219 965 195 42 9 chrX 83201051 83201263 -83449033 - Lx LINE L1 -4 6650 6432 4 1219 22 0 0 0 chrX 83201800 83201822 -83448474 + AT_rich Low_complexity Low_complexity 1 22 0 4 1219 180 0 0 0 chrX 83202131 83202151 -83448145 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 4 1219 8391 85 10 4 chrX 83202160 83204148 -83446148 - L1_Mus2 LINE L1 -1 6565 4563 4 1219 1214 130 5 0 chrX 83204244 83204429 -83445867 + B2_Mm2 SINE B2 1 186 -9 5 1219 399 318 37 52 chrX 83204446 83204582 -83445714 + RSINE1 SINE B4 32 165 0 5 1219 503 222 34 0 chrX 83204862 83204979 -83445317 + MIR SINE MIR 63 183 -79 5 1219 303 362 0 0 chrX 83204991 83205085 -83445211 - PB1D9 SINE Alu -2 118 25 5 1219 225 0 0 0 chrX 83205265 83205290 -83445006 + (TTA)n Simple_repeat Simple_repeat 1 25 0 5 1219 3307 40 2 0 chrX 83205944 83206339 -83443957 - MTA_Mm LTR MaLR 0 396 1 5 1219 502 284 9 0 chrX 83206485 83206601 -83443695 - RSINE1 SINE B4 -40 125 9 5 1219 228 264 18 36 chrX 83206661 83206771 -83443525 - L1MA8 LINE L1 -22 6269 6162 5 1219 271 311 38 28 chrX 83206893 83206999 -83443297 + MLT1J LTR MaLR 239 345 -167 5 1219 3611 54 2 37 chrX 83207533 83208015 -83442281 - L1Md_F2 LINE L1 0 6582 6118 5 1219 2924 38 3 0 chrX 83208157 83208502 -83441794 - ORR1A1 LTR MaLR 0 346 1 5 1219 449 308 25 16 chrX 83208925 83209047 -83441249 + B1_Mur2 SINE Alu 1 123 -26 5 1219 260 336 59 59 chrX 83209187 83209339 -83440957 + RSINE1 SINE B4 14 165 0 5 1219 271 266 16 0 chrX 83209396 83209460 -83440836 - ID4 SINE ID -13 70 6 5 1219 22 56 0 0 chrX 83209490 83209526 -83440770 + AT_rich Low_complexity Low_complexity 1 36 0 5 1219 457 277 121 41 chrX 83209581 83209889 -83440407 - Charlie2b DNA MER1_type -2396 386 69 5 1219 289 207 85 0 chrX 83210136 83210218 -83440078 + Lx8 LINE L1 6096 6184 -1289 5 1219 210 91 0 0 chrX 83210231 83210264 -83440032 + (GA)n Simple_repeat Simple_repeat 1 33 0 5 1219 26 0 0 0 chrX 83210482 83210508 -83439788 + AT_rich Low_complexity Low_complexity 1 26 0 5 1219 2954 23 2 148 chrX 83210810 83211264 -83439032 + RLTR10 LTR ERVK 1 388 -2 5 1219 15694 28 3 31 chrX 83211268 83213307 -83436989 + RLTR10-int LTR ERVK 3 1984 -3 5 1219 2880 21 2 178 chrX 83213309 83213780 -83436516 + RLTR10 LTR ERVK 1 388 -2 5 1219 617 258 33 7 chrX 83214496 83214648 -83435648 - LTR16A1 LTR ERVL -2 454 299 5 1219 2727 69 18 8 chrX 83215508 83215890 -83434406 + L1_Mus3 LINE L1 6248 6633 -5 5 1219 23 0 0 0 chrX 83216211 83216234 -83434062 + AT_rich Low_complexity Low_complexity 1 23 0 5 1219 3327 46 0 5 chrX 83216319 83216734 -83433562 - L1Md_F2 LINE L1 -1 6581 6169 5 1219 629 242 52 21 chrX 83216738 83216932 -83433364 - Lx8 LINE L1 -130 7343 7144 5 1219 259 246 16 0 chrX 83216985 83217046 -83433250 - B3 SINE B2 -2 214 153 5 1219 408 202 54 63 chrX 83217058 83217169 -83433127 - B1F1 SINE Alu -5 144 35 5 1219 672 276 10 5 chrX 83217451 83217648 -83432648 - B3A SINE B2 0 198 1 5 1219 928 104 22 0 chrX 83218111 83218245 -83432051 - B1_Mus1 SINE Alu -1 147 11 5 1219 690 283 33 5 chrX 83218437 83218650 -83431646 + MER20 DNA MER1_type 1 219 0 5 1219 512 242 62 75 chrX 83219366 83219527 -83430769 + RSINE1 SINE B4 5 163 -2 5 1219 558 113 0 0 chrX 83219527 83219633 -83430663 + (GA)n Simple_repeat Simple_repeat 1 106 0 5 1219 573 15 0 0 chrX 83219722 83219788 -83430508 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 1219 389 299 52 0 chrX 83219843 83219977 -83430319 - B1F1 SINE Alu -7 142 2 5 1219 1117 216 0 39 chrX 83220424 83220679 -83429617 - Lx7 LINE L1 -625 7071 6827 5 1219 411 301 29 89 chrX 83220695 83221044 -83429252 + Lx7 LINE L1 7093 7432 -41 5 1219 29 0 0 0 chrX 83221052 83221081 -83429215 + AT_rich Low_complexity Low_complexity 1 29 0 5 1219 345 264 28 0 chrX 83221165 83221237 -83429059 - ID4 SINE ID -2 81 8 5 1219 330 274 135 43 chrX 83222558 83222699 -83427597 - MER63B DNA AcHobo -15 421 268 5 1219 1684 217 45 20 chrX 83222997 83223354 -83426942 - ORR1D2 LTR MaLR -4 366 1 5 1219 1057 123 12 0 chrX 83223497 83223659 -83426637 + B2_Mm2 SINE B2 1 164 -31 5 1219 25 31 0 0 chrX 83223659 83223691 -83426605 + AT_rich Low_complexity Low_complexity 1 32 0 5 1219 3754 167 23 12 chrX 83223691 83224352 -83425944 - Lx4A LINE L1 -3 7055 6388 5 1219 4125 48 0 0 chrX 83225563 83226060 -83424236 - L1_Mus1 LINE L1 0 6567 6071 5 1219 3098 52 5 0 chrX 83226060 83226444 -83423852 + L1_Mus1 LINE L1 5703 6088 -479 5 1219 219 303 78 72 chrX 83226986 83227153 -83423143 - L2c LINE L2 -2 3424 3257 5 1219 261 326 112 34 chrX 83227253 83227431 -83422865 - L2c LINE L2 -234 3153 2962 5 1219 213 379 35 65 chrX 83227675 83227904 -83422392 - MIR SINE MIR -39 223 2 5 1219 713 277 68 17 chrX 83227952 83228187 -83422109 + Lx9 LINE L1 6964 7210 -434 5 1219 3436 89 0 28 chrX 83228986 83229483 -83420813 + L1Md_F2 LINE L1 6098 6580 -2 5 1219 312 263 51 26 chrX 83229762 83229879 -83420417 - L1MC LINE L1 -2130 5752 5633 5 1219 24 85 0 0 chrX 83229890 83229949 -83420347 + AT_rich Low_complexity Low_complexity 1 59 0 5 1219 245 202 266 0 chrX 83230451 83230545 -83419751 + L1M5 LINE L1 5705 5823 -417 5 1220 354 298 103 26 chrX 83230900 83231055 -83419241 + L1M5 LINE L1 4175 4341 -1805 5 1220 930 264 19 19 chrX 83231124 83231340 -83418956 + B4 SINE B4 59 274 -18 5 1220 33 25 0 0 chrX 83231402 83231442 -83418854 + AT_rich Low_complexity Low_complexity 1 40 0 5 1220 280 315 138 17 chrX 83231543 83231950 -83418346 + L1M5 LINE L1 4565 5020 -1126 5 1220 348 314 114 44 chrX 83231965 83232089 -83418207 + L1M5 LINE L1 4988 5115 -1031 5 1220 1252 48 0 12 chrX 83232089 83232257 -83418039 + L1Md_F2 LINE L1 6405 6570 -12 5 1220 348 314 114 44 chrX 83232257 83232365 -83417931 + L1M5 LINE L1 5116 5233 -913 5 1220 477 0 0 0 chrX 83232365 83232418 -83417878 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 1220 426 344 82 33 chrX 83232418 83232713 -83417583 + L1M5 LINE L1 5234 5546 -694 5 1220 1018 78 50 0 chrX 83232913 83233054 -83417242 + B1_Mus1 SINE Alu 1 148 0 5 1220 192 388 0 0 chrX 83233142 83233227 -83417069 - MIRb SINE MIR -26 242 158 5 1220 456 19 0 0 chrX 83233550 83233603 -83416693 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1220 456 343 11 68 chrX 83233984 83234175 -83416121 + B4A SINE B4 113 292 0 5 1220 371 110 0 137 chrX 83234187 83234282 -83416014 + L1Md_F2 LINE L1 6499 6580 -2 5 1220 266 0 29 0 chrX 83234464 83234498 -83415798 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1220 4897 149 45 28 chrX 83234554 83235439 -83414857 + Lx4A LINE L1 6150 7049 -9 5 1220 570 29 0 0 chrX 83235447 83235515 -83414781 + (GGGAA)n Simple_repeat Simple_repeat 4 71 0 5 1220 235 138 52 0 chrX 83237167 83237225 -83413071 + (CATATA)n Simple_repeat Simple_repeat 5 65 0 5 1220 527 267 34 68 chrX 83237513 83237690 -83412606 - Lx9 LINE L1 -977 6667 6497 5 1220 263 157 98 0 chrX 83237657 83237708 -83412588 + Lx9 LINE L1 6744 6799 -845 5 1220 7634 176 82 13 chrX 83237733 83239874 -83410422 - Lx5 LINE L1 -11 7039 4841 5 1220 207 0 0 0 chrX 83239874 83239897 -83410399 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 1220 7634 157 134 13 chrX 83239897 83240502 -83409794 - Lx5 LINE L1 -1037 4840 4060 5 1220 2570 174 45 20 chrX 83240505 83240665 -83409631 - Lx5 LINE L1 -3663 2214 2058 5 1220 354 45 0 0 chrX 83240665 83240709 -83409587 + (TGG)n Simple_repeat Simple_repeat 1 44 0 5 1220 2570 174 45 20 chrX 83240709 83241100 -83409196 - Lx5 LINE L1 -3820 2057 1649 5 1220 475 154 14 13 chrX 83241119 83241217 -83409079 + L1_Mur2 LINE L1 2231 2335 -3551 5 1220 821 83 7 34 chrX 83241576 83241725 -83408571 - Lx LINE L1 0 6654 6510 5 1220 704 187 16 0 chrX 83244142 83244265 -83406031 + RSINE1 SINE B4 3 127 -38 5 1220 33 0 0 0 chrX 83244325 83244358 -83405938 + AT_rich Low_complexity Low_complexity 1 33 0 5 1220 6777 139 75 55 chrX 83244871 83245529 -83404767 + Lx4B LINE L1 5723 6380 -678 5 1220 6587 38 1 8 chrX 83245529 83246327 -83403969 + L1Md_F2 LINE L1 5782 6574 -8 5 1220 6777 139 75 55 chrX 83246327 83246503 -83403793 + Lx4B LINE L1 6381 6542 -516 5 1220 4096 44 79 4 chrX 83246503 83247024 -83403272 + LTRIS2 LTR ERV1 5 564 0 5 1220 6777 139 75 55 chrX 83247024 83247497 -83402799 + Lx4B LINE L1 6543 7057 -1 5 1220 6489 120 4 11 chrX 83248062 83249030 -83401266 + Lx LINE L1 5693 6653 -1 5 1220 1738 247 68 17 chrX 83249108 83249577 -83400719 + MT2A LTR ERVL 1 493 -40 5 1220 218 156 0 22 chrX 83249581 83249627 -83400669 + (TATG)n Simple_repeat Simple_repeat 4 48 0 5 1220 750 335 5 0 chrX 83249648 83249857 -83400439 + B3 SINE B2 1 210 -6 5 1220 4501 58 2 0 chrX 83249981 83250548 -83399748 + L1Md_F2 LINE L1 5018 5585 -298 5 1220 7678 55 18 2 chrX 83250549 83251516 -83398780 + L1Md_F2 LINE L1 5587 6568 -14 5 1220 281 314 39 40 chrX 83251576 83251860 -83398436 + L1_Rod LINE L1 1161 1437 -4410 5 1220 1818 140 77 3 chrX 83251860 83252183 -83398113 - Lx LINE L1 -4 6650 6304 5 1220 281 345 50 53 chrX 83252183 83252320 -83397976 + L1_Rod LINE L1 1438 1581 -4266 5 1220 826 246 63 15 chrX 83252345 83252551 -83397745 - MTD LTR MaLR -8 411 196 5 1220 6988 67 34 18 chrX 83252576 83253783 -83396513 - L1_Mus2 LINE L1 -4 6562 5337 5 1220 783 205 53 0 chrX 83253805 83253956 -83396340 - MTD LTR MaLR -260 159 1 5 1220 271 213 114 30 chrX 83253961 83254092 -83396204 + L1_Rod LINE L1 1603 1744 -4103 5 1220 2144 275 85 28 chrX 83254208 83254849 -83395447 + L1_Mur3 LINE L1 2968 3632 -2248 5 1220 423 0 0 0 chrX 83254849 83254896 -83395400 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1220 2144 275 85 28 chrX 83254896 83255366 -83394930 + L1_Mur3 LINE L1 3633 4143 -1737 5 1220 464 363 73 22 chrX 83255390 83255686 -83394610 + Lx8 LINE L1 6990 7432 -212 5 1220 432 0 0 0 chrX 83255686 83255734 -83394562 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1220 448 286 51 29 chrX 83255734 83255896 -83394400 + Lx8 LINE L1 7433 7622 -22 5 1220 283 190 12 37 chrX 83256001 83256083 -83394213 - MER53 DNA hAT 0 193 114 5 1220 792 179 21 0 chrX 83256457 83256602 -83393694 - B1_Mur2 SINE Alu -1 148 1 5 1220 190 266 157 48 chrX 83256711 83256794 -83393502 + MIRm SINE MIR 174 265 -11 5 1220 593 227 66 29 chrX 83256820 83256956 -83393340 + B1F2 SINE Alu 2 142 -7 5 1220 24 0 0 0 chrX 83257542 83257566 -83392730 + AT_rich Low_complexity Low_complexity 1 24 0 5 1220 708 300 84 14 chrX 83258003 83258348 -83391948 + L1M4 LINE L1 5417 5785 -399 5 1220 1396 263 48 53 chrX 83258368 83258782 -83391514 - MTD LTR MaLR -2 417 6 5 1220 287 318 0 18 chrX 83258786 83258898 -83391398 + L1MB3 LINE L1 5804 5913 -270 5 1220 343 179 13 0 chrX 83259037 83259115 -83391181 + L1MB8 LINE L1 6094 6172 -6 5 1220 1171 68 7 0 chrX 83259149 83259295 -83391001 - B1_Mm SINE Alu 0 147 1 5 1220 222 37 0 0 chrX 83259432 83259459 -83390837 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 6 1220 204 312 42 59 chrX 83260110 83260229 -83390067 - L2 LINE L2 -755 2664 2548 6 1220 1103 256 56 89 chrX 83261005 83261396 -83388900 + MTEa LTR MaLR 2 379 0 6 1220 1614 309 101 47 chrX 83261396 83261583 -83388713 + MTEa-int LTR MaLR 2 193 -1387 6 1220 1315 77 16 11 chrX 83261583 83261766 -83388530 - B2_Mm2 SINE B2 -7 188 5 6 1220 1614 309 101 47 chrX 83261766 83262283 -83388013 + MTEa-int LTR MaLR 194 743 -837 6 1220 4230 143 31 62 chrX 83262283 83262413 -83387883 + Lx3C LINE L1 5114 5244 -642 6 1220 3090 98 14 43 chrX 83262413 83262904 -83387392 + Lx LINE L1 6160 6636 -18 6 1220 6222 145 40 51 chrX 83262904 83263740 -83386556 + Lx3C LINE L1 5245 6107 -869 6 1220 1894 158 106 78 chrX 83263740 83264174 -83386122 - RLTR41 LTR ERV1 0 446 1 6 1220 6222 152 75 8 chrX 83264174 83264842 -83385454 + Lx3C LINE L1 6108 6788 -188 6 1220 1132 250 25 74 chrX 83264850 83265174 -83385122 + MTEa-int LTR MaLR 1110 1417 -163 6 1220 287 311 47 0 chrX 83265191 83265297 -83384999 + MTEb LTR MaLR 269 379 0 6 1220 270 116 0 0 chrX 83265682 83265725 -83384571 + (CATA)n Simple_repeat Simple_repeat 4 46 0 6 1220 310 70 35 17 chrX 83265726 83265784 -83384512 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 6 1220 183 80 0 0 chrX 83267447 83267472 -83382824 + (TAA)n Simple_repeat Simple_repeat 1 25 0 6 1220 21 0 0 0 chrX 83267650 83267671 -83382625 + AT_rich Low_complexity Low_complexity 1 21 0 6 1220 230 232 8 138 chrX 83267959 83268089 -83382207 - Lx8 LINE L1 -17 7456 7344 6 1220 843 299 35 30 chrX 83268102 83268395 -83381901 - RMER15 LTR ERVL -104 471 88 6 1220 34616 100 17 15 chrX 83268448 83268837 -83381459 - L1Md_F2 LINE L1 -1 6996 6609 6 1220 293 140 20 20 chrX 83268837 83268888 -83381408 - RMER15 LTR ERVL -524 51 1 6 1220 34616 100 17 15 chrX 83268888 83275202 -83375094 - L1Md_F2 LINE L1 -1 6608 299 6 1220 1754 211 74 129 chrX 83275257 83275784 -83374512 + RLTR25B LTR ERVK 1 498 -530 6 1220 311 248 171 18 chrX 83275716 83275827 -83374469 + B1_Mur1 SINE Alu 22 149 0 6 1220 832 114 8 15 chrX 83275813 83275946 -83374350 + RLTR25A LTR ERVK 391 522 -581 6 1220 818 148 182 140 chrX 83275870 83276106 -83374190 + ORR1A3-int LTR MaLR 499 744 -1219 6 1220 1280 181 76 62 chrX 83275974 83276262 -83374034 + MT2B LTR ERVL 35 326 -275 6 1220 984 204 3 39 chrX 83276184 83276472 -83373824 + ORR1A3-int LTR MaLR 633 961 -1002 6 1220 673 217 314 43 chrX 83276437 83276736 -83373560 + RLTR25B LTR ERVK 649 1028 0 6 1220 278 242 15 0 chrX 83276912 83276978 -83373318 - Lx8 LINE L1 -383 7090 7024 6 1220 1140 250 20 16 chrX 83277013 83277265 -83373031 - ORR1D2 LTR MaLR -117 253 1 6 1220 2308 281 67 41 chrX 83278580 83279353 -83370943 - Lx8 LINE L1 -457 7016 6224 6 1220 23 0 0 0 chrX 83279421 83279444 -83370852 + AT_rich Low_complexity Low_complexity 1 23 0 6 1220 212 264 0 0 chrX 83281267 83281320 -83368976 + CT-rich Low_complexity Low_complexity 4 56 0 6 1220 483 73 0 0 chrX 83281349 83281417 -83368879 + (TG)n Simple_repeat Simple_repeat 1 68 0 6 1220 195 42 0 0 chrX 83282215 83282239 -83368057 + (ATTG)n Simple_repeat Simple_repeat 3 26 0 6 1220 16416 78 6 3 chrX 83282246 83284166 -83366130 - L1Md_F2 LINE L1 -13 6569 4644 6 1220 3420 23 5 0 chrX 83284166 83284560 -83365736 - MTA_Mm LTR MaLR 0 396 1 6 1220 16416 77 1 4 chrX 83284560 83285523 -83364773 - L1Md_F2 LINE L1 -1240 4643 3680 6 1220 638 279 69 5 chrX 83285649 83285851 -83364445 + B3 SINE B2 1 215 -1 6 1220 976 311 28 44 chrX 83287185 83287545 -83362751 - ORR1E LTR MaLR -5 354 1 6 1220 347 0 23 0 chrX 83287890 83287933 -83362363 + (CATAT)n Simple_repeat Simple_repeat 2 45 0 6 1220 651 291 39 67 chrX 83287997 83288251 -83362045 + Lx8 LINE L1 7151 7397 -76 6 1220 351 0 0 0 chrX 83288333 83288372 -83361924 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1220 745 299 27 123 chrX 83288803 83289104 -83361192 + MTD LTR MaLR 148 419 0 6 1220 195 288 61 26 chrX 83289823 83289937 -83360359 + MIR SINE MIR 123 240 -22 6 1220 1095 89 7 0 chrX 83290169 83290315 -83359981 + B1_Mus2 SINE Alu 1 147 0 6 1220 405 0 0 0 chrX 83290445 83290490 -83359806 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1220 221 0 35 0 chrX 83290688 83290717 -83359579 + (CAAAAA)n Simple_repeat Simple_repeat 3 32 0 6 1220 228 329 27 0 chrX 83291085 83291158 -83359138 - ID4_ SINE ID -6 77 3 6 1220 180 262 46 81 chrX 83291179 83291266 -83359030 + L3 LINE CR1 1060 1143 -3346 6 1220 252 291 65 108 chrX 83292930 83293115 -83357181 - MER20 DNA MER1_type 0 219 43 6 1220 3232 94 4 9 chrX 83293671 83294133 -83356163 + L1_Mus3 LINE L1 6178 6637 -1 6 1220 948 261 147 92 chrX 83294335 83294846 -83355450 - RMER4B LTR ERVK -6 579 41 6 1220 2225 151 28 28 chrX 83295150 83295174 -83355122 + ORR1B1 LTR MaLR 1 24 -370 6 1220 1752 206 72 169 chrX 83295174 83295850 -83354446 + RMER19C LTR ERVK 1 611 0 6 1220 2225 151 28 28 chrX 83295850 83296219 -83354077 + ORR1B1 LTR MaLR 25 394 0 6 1220 287 303 0 0 chrX 83296220 83296296 -83354000 - RMER5 LTR ERV1 -71 463 388 6 1220 7286 103 16 5 chrX 83296317 83297346 -83352950 - Lx LINE L1 -25 6629 5589 6 1220 232 245 0 19 chrX 83297452 83297506 -83352790 - MTB LTR MaLR 0 400 348 6 1220 235 245 58 87 chrX 83297579 83297682 -83352614 + RMER10A LTR ERVL 18 117 -325 6 1220 419 276 73 22 chrX 83297679 83297857 -83352439 + RMER5 LTR ERV1 69 255 -279 6 1220 220 270 7 7 chrX 83298121 83298259 -83352037 + CT-rich Low_complexity Low_complexity 2 139 0 6 1220 1419 191 40 19 chrX 83298367 83298692 -83351604 + L1_Rod LINE L1 891 1222 -6386 6 1220 1565 172 55 3 chrX 83298709 83299018 -83351278 + L1_Rod LINE L1 2213 2537 -3310 6 1220 1976 177 39 6 chrX 83299019 83299377 -83350919 - ORR1C1 LTR MaLR -8 370 1 6 1220 2541 157 104 4 chrX 83299380 83299859 -83350437 - ORR1C1-int LTR MaLR -4 1505 979 6 1220 1088 204 58 58 chrX 83299854 83299965 -83350331 - ORR1C1-int LTR MaLR -1012 497 396 6 1220 1426 162 138 225 chrX 83299965 83300721 -83349575 + RMER6C LTR ERVK 1 690 0 6 1220 1088 204 58 58 chrX 83300721 83300885 -83349411 - ORR1C1-int LTR MaLR -1114 395 222 6 1220 3424 179 75 33 chrX 83300908 83301672 -83348624 + Lx9 LINE L1 6848 7643 -1 6 1220 795 194 14 0 chrX 83302479 83302623 -83347673 - B1_Mus2 SINE Alu -1 146 1 6 1220 1825 168 105 23 chrX 83302661 83303050 -83347246 + MTC LTR MaLR 1 421 0 6 1220 24 77 0 0 chrX 83303164 83303216 -83347080 + AT_rich Low_complexity Low_complexity 1 52 0 6 1220 23 0 0 0 chrX 83303346 83303369 -83346927 + AT_rich Low_complexity Low_complexity 1 23 0 6 1220 224 206 37 12 chrX 83303374 83303536 -83346760 + (TATAA)n Simple_repeat Simple_repeat 2 167 0 6 1220 416 311 0 0 chrX 83303771 83303877 -83346419 - MLT1H2 LTR MaLR -304 185 80 6 1220 1371 293 61 42 chrX 83304216 83304793 -83345503 - Lx8 LINE L1 -852 6621 6034 6 1220 1401 280 8 50 chrX 83305179 83305679 -83344617 - Lx8 LINE L1 0 5847 5369 6 1220 608 281 143 9 chrX 83305676 83305899 -83344397 - Lx5 LINE L1 -4 7456 7204 6 1220 231 385 48 0 chrX 83306017 83306121 -83344175 - MLT1I LTR MaLR -239 172 64 6 1220 201 74 0 0 chrX 83306216 83306243 -83344053 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1220 3524 256 46 31 chrX 83306277 83307065 -83343231 - Lx5 LINE L1 -567 6893 6114 6 1220 186 43 0 0 chrX 83307065 83307088 -83343208 + (TC)n Simple_repeat Simple_repeat 1 23 0 6 1220 3524 171 49 22 chrX 83307088 83307718 -83342578 - Lx5 LINE L1 -937 6113 5452 6 1220 804 176 37 3 chrX 83308366 83308530 -83341766 - L1_Mur2 LINE L1 -652 5512 5311 6 1220 1031 126 18 12 chrX 83308535 83308704 -83341592 - B2_Mm2 SINE B2 0 195 26 6 1220 2393 160 37 32 chrX 83308707 83309199 -83341097 - L1_Mur2 LINE L1 -580 5297 4804 6 1220 609 93 0 0 chrX 83309214 83309300 -83340996 + L1_Mur3 LINE L1 4714 4799 -1081 6 1220 619 303 158 54 chrX 83309296 83309578 -83340718 - Lx5 LINE L1 -469 5411 5128 6 1220 609 14 0 0 chrX 83309578 83309648 -83340648 + (TTTTG)n Simple_repeat Simple_repeat 5 74 0 6 1220 619 303 158 54 chrX 83309648 83309997 -83340299 - Lx5 LINE L1 -753 5127 4716 6 1220 940 258 68 35 chrX 83310253 83310651 -83339645 - Lx5 LINE L1 -1310 4570 4160 6 1220 478 228 0 27 chrX 83310742 83310891 -83339405 + Lx2B LINE L1 6853 6997 -3 6 1220 570 302 39 16 chrX 83310869 83311125 -83339171 - L1_Rod LINE L1 -1918 4222 3939 6 1220 22 0 0 0 chrX 83311498 83311520 -83338776 + AT_rich Low_complexity Low_complexity 1 22 0 6 1220 4102 71 6 0 chrX 83311646 83312181 -83338115 + L1Md_F2 LINE L1 6033 6570 -12 6 1220 5510 192 20 21 chrX 83312182 83313397 -83336899 + Lx4B LINE L1 5739 6972 -28 6 1220 30 0 0 0 chrX 83315090 83315120 -83335176 + AT_rich Low_complexity Low_complexity 1 30 0 6 1220 495 69 0 0 chrX 83315227 83315299 -83334997 + (CA)n Simple_repeat Simple_repeat 1 72 0 6 1220 485 347 11 11 chrX 83315304 83315482 -83334814 - Lx8 LINE L1 -144 7329 7152 6 1220 912 272 86 48 chrX 83315572 83315969 -83334327 + Lx9 LINE L1 6998 7409 -235 6 1220 2255 140 57 5 chrX 83315985 83316386 -83333910 + Lx3C LINE L1 6547 6968 -8 6 1220 26 64 0 0 chrX 83316939 83316986 -83333310 + AT_rich Low_complexity Low_complexity 1 47 0 6 1220 924 172 40 11 chrX 83317093 83317269 -83333027 + B2_Mm2 SINE B2 1 181 -14 6 1220 359 304 88 18 chrX 83317370 83317598 -83332698 + L1MB8 LINE L1 5472 5715 -463 6 1220 3370 43 2 2 chrX 83317590 83318006 -83332290 - L1Md_F2 LINE L1 -25 6557 6142 6 1220 22 35 0 0 chrX 83318021 83318050 -83332246 + AT_rich Low_complexity Low_complexity 1 29 0 6 1220 417 224 127 6 chrX 83318055 83318221 -83332075 + L1MB8 LINE L1 5709 5894 -284 6 1220 357 264 112 15 chrX 83318523 83318719 -83331577 - L1MC LINE L1 -754 5392 5178 6 1220 263 347 0 0 chrX 83320001 83320073 -83330223 - RSINE1 SINE B4 -80 85 14 6 1220 440 241 0 11 chrX 83320075 83320163 -83330133 + B4 SINE B4 20 106 -186 6 1220 818 263 101 19 chrX 83320178 83320445 -83329851 + Lx6 LINE L1 7110 7398 -62 6 1220 255 31 0 0 chrX 83320457 83320489 -83329807 + (GA)n Simple_repeat Simple_repeat 1 32 0 6 1220 498 278 86 72 chrX 83320555 83320764 -83329532 + B4 SINE B4 81 292 0 6 1220 234 167 0 0 chrX 83320787 83320847 -83329449 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 1220 387 0 0 0 chrX 83321708 83321751 -83328545 + (T)n Simple_repeat Simple_repeat 1 43 0 6 1220 349 268 68 25 chrX 83322191 83322352 -83327944 + L1MA6 LINE L1 5769 5936 -364 6 1220 396 40 0 0 chrX 83322354 83322404 -83327892 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1220 396 0 0 0 chrX 83322404 83322447 -83327849 + (GA)n Simple_repeat Simple_repeat 1 44 0 6 1220 281 285 43 65 chrX 83322726 83322865 -83327431 - L1M3 LINE L1 -324 5844 5709 6 1220 265 246 58 0 chrX 83322949 83323018 -83327278 - ID2 SINE ID -10 73 1 6 1220 421 250 49 20 chrX 83323111 83323213 -83327083 - PB1D10 SINE Alu 0 117 13 6 1220 618 304 60 14 chrX 83323742 83323959 -83326337 - B4A SINE B4 -60 232 6 6 1220 399 322 89 20 chrX 83324330 83324476 -83325820 - RSINE1 SINE B4 -7 158 3 7 1220 24 32 0 0 chrX 83324529 83324560 -83325736 + AT_rich Low_complexity Low_complexity 1 31 0 7 1220 611 258 16 8 chrX 83326583 83326708 -83323588 + ID_B1 SINE B4 79 204 -20 7 1220 265 321 35 35 chrX 83326608 83326721 -83323575 - YREP_Mm Unknown Unknown -1518 294 182 7 1220 351 0 0 0 chrX 83327115 83327154 -83323142 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 1220 208 191 21 0 chrX 83327200 83327247 -83323049 + (TA)n Simple_repeat Simple_repeat 1 48 0 7 1220 490 292 26 31 chrX 83327302 83327372 -83322924 + L1MA4 LINE L1 5706 5777 -523 7 1220 288 0 0 0 chrX 83327372 83327404 -83322892 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 1220 490 292 26 31 chrX 83327404 83327559 -83322737 + L1MA4 LINE L1 5778 5930 -370 7 1220 770 284 25 3 chrX 83327640 83327973 -83322323 + Lx8 LINE L1 5526 5870 -10 7 1220 591 40 0 0 chrX 83328004 83328078 -83322218 + (TG)n Simple_repeat Simple_repeat 1 74 0 7 1220 8595 98 15 15 chrX 83328313 83329579 -83320717 - Lx3A LINE L1 -4 6977 5712 7 1220 24 0 0 0 chrX 83329583 83329607 -83320689 + AT_rich Low_complexity Low_complexity 1 24 0 7 1220 557 234 35 124 chrX 83329642 83329845 -83320451 - L1MA9 LINE L1 -4 6308 6131 7 1220 219 125 0 0 chrX 83329845 83329885 -83320411 + (TA)n Simple_repeat Simple_repeat 1 40 0 7 1220 557 234 35 124 chrX 83329885 83329964 -83320332 - L1MA9 LINE L1 -182 6130 6052 7 1220 21 57 0 0 chrX 83330179 83330214 -83320082 + AT_rich Low_complexity Low_complexity 1 35 0 7 1220 235 156 0 179 chrX 83331210 83331288 -83319008 - Lx8 LINE L1 -359 7114 7051 7 1220 774 241 80 0 chrX 83331297 83331484 -83318812 + Lx8 LINE L1 6289 6490 -983 7 1220 847 64 18 7 chrX 83331485 83331627 -83318669 + B1_Mm SINE Alu 1 149 0 7 1220 2319 294 41 36 chrX 83331666 83332473 -83317823 + Lx8 LINE L1 6479 7289 -184 7 1220 2145 92 5 0 chrX 83332572 83332874 -83317422 - Lx2 LINE L1 -1261 5736 5433 7 1220 306 0 0 0 chrX 83332898 83332932 -83317364 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 1220 2216 309 43 13 chrX 83332992 83333756 -83316540 - Lx8 LINE L1 -2 7471 6685 7 1220 235 348 133 9 chrX 83333760 83333873 -83316423 - ID_B1 SINE B4 0 224 98 7 1220 21 0 0 0 chrX 83334801 83334822 -83315474 + AT_rich Low_complexity Low_complexity 1 21 0 7 1220 347 0 23 0 chrX 83334876 83334919 -83315377 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1220 327 276 60 20 chrX 83335387 83335487 -83314809 + PB1D10 SINE Alu 12 115 -2 7 1220 317 246 0 76 chrX 83335672 83335751 -83314545 - BC1_Mm scRNA scRNA -6 77 1 7 1220 387 310 128 28 chrX 83335754 83336095 -83314201 + L1ME3A LINE L1 5690 6062 -102 7 1220 570 93 0 0 chrX 83336111 83336197 -83314099 + (TG)n Simple_repeat Simple_repeat 1 86 0 7 1220 2307 110 3 0 chrX 83337525 83337851 -83312445 - ORR1A2 LTR MaLR 0 327 1 7 1220 9424 136 99 21 chrX 83337851 83339627 -83310669 - ORR1A2-int LTR MaLR 0 1963 50 7 1220 2153 110 3 12 chrX 83339655 83339977 -83310319 - ORR1A2 LTR MaLR -8 319 1 7 1220 326 308 114 30 chrX 83340682 83341077 -83309219 - L1ME3A LINE L1 -127 6046 5615 7 1220 240 35 0 0 chrX 83341269 83341298 -83308998 + (TC)n Simple_repeat Simple_repeat 1 29 0 7 1220 541 305 8 0 chrX 83341350 83341468 -83308828 + RSINE1 SINE B4 47 165 0 7 1220 341 333 30 0 chrX 83341917 83342024 -83308272 + B1F SINE Alu 1 109 -8 7 1220 33 66 0 0 chrX 83342176 83342237 -83308059 + AT_rich Low_complexity Low_complexity 1 61 0 7 1220 346 284 47 17 chrX 83343271 83343443 -83306853 - L1M5 LINE L1 -331 5793 5617 7 1220 731 267 80 0 chrX 83343785 83343972 -83306324 + ID_B1 SINE B4 1 202 -22 7 1220 243 254 28 56 chrX 83344186 83344257 -83306039 + ID4_ SINE ID 14 82 -1 7 1220 1874 158 42 17 chrX 83344257 83344612 -83305684 - RLTR11A2 LTR ERVK -163 364 1 7 1220 45 62 0 0 chrX 83344612 83344692 -83305604 + AT_rich Low_complexity Low_complexity 1 80 0 7 1220 331 162 126 0 chrX 83344886 83344997 -83305299 + Lx9 LINE L1 7519 7643 -1 7 1220 4512 114 43 10 chrX 83345549 83346275 -83304021 - Lx3C LINE L1 -1 6975 6226 7 1220 7233 123 4 43 chrX 83346275 83347052 -83303244 - L1_Mur1 LINE L1 -913 4973 4214 7 1220 3358 119 62 4 chrX 83347052 83347584 -83302712 + Lx LINE L1 6085 6647 -7 7 1220 7233 123 4 43 chrX 83347584 83348076 -83302220 - L1_Mur1 LINE L1 -1673 4213 3754 7 1220 551 322 43 5 chrX 83348405 83348614 -83301682 - Lx9 LINE L1 -172 7472 7256 7 1220 2326 265 73 28 chrX 83348642 83349381 -83300915 - Lx9 LINE L1 -462 7182 6411 7 1220 287 25 25 0 chrX 83349464 83349504 -83300792 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1220 10340 88 8 28 chrX 83349700 83352124 -83298172 + L1VL1 LINE L1 338 2703 -3180 7 1220 400 131 0 0 chrX 83352124 83352185 -83298111 + L1Md_F2 LINE L1 5525 5585 -298 7 1220 7036 94 8 15 chrX 83352186 83353187 -83297109 + L1Md_F2 LINE L1 5587 6580 -2 7 1220 778 359 89 21 chrX 83354856 83355471 -83294825 + L2 LINE L2 2275 2931 -488 7 1220 414 0 0 0 chrX 83355504 83355550 -83294746 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1220 379 214 44 9 chrX 83355552 83355665 -83294631 + Lx9 LINE L1 7527 7643 -1 7 1220 7103 112 53 6 chrX 83355795 83357424 -83292872 - L1_Mus4 LINE L1 0 6636 4928 7 1220 1008 60 0 15 chrX 83357424 83357560 -83292736 + B1_Mm SINE Alu 2 135 -12 7 1220 456 19 0 0 chrX 83357560 83357613 -83292683 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 7 1220 5132 154 77 9 chrX 83357613 83357689 -83292607 - L1_Mus4 LINE L1 -956 4927 4854 7 1220 6348 210 46 112 chrX 83357703 83359904 -83290392 + L1_Mur2 LINE L1 3650 5705 -172 7 1220 1131 338 50 66 chrX 83359928 83360470 -83289826 + MLT1F2 LTR MaLR 3 652 -1 7 1220 1171 41 0 20 chrX 83360625 83360774 -83289522 - B1_Mm SINE Alu 0 147 2 7 1221 549 138 0 0 chrX 83362259 83362353 -83287943 + (CA)n Simple_repeat Simple_repeat 2 95 0 7 1221 210 143 0 0 chrX 83362457 83362492 -83287804 + (TG)n Simple_repeat Simple_repeat 1 35 0 7 1221 1103 158 16 62 chrX 83362501 83362757 -83287539 + Lx2A1 LINE L1 6765 7008 0 7 1221 312 27 0 0 chrX 83362770 83362807 -83287489 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 7 1221 654 126 0 0 chrX 83362892 83362995 -83287301 + (TCC)n Simple_repeat Simple_repeat 3 105 0 7 1221 1094 79 0 0 chrX 83362999 83363139 -83287157 - B1_Mus1 SINE Alu -7 141 2 7 1221 385 228 48 28 chrX 83363139 83363256 -83287040 - MLT1C LTR MaLR -270 120 7 7 1221 1206 54 0 0 chrX 83363365 83363512 -83286784 + B1_Mus2 SINE Alu 1 147 0 7 1221 253 231 12 37 chrX 83363725 83363806 -83286490 + Lx9 LINE L1 6677 6755 -889 7 1221 23 33 0 0 chrX 83364013 83364043 -83286253 + AT_rich Low_complexity Low_complexity 1 30 0 7 1221 1331 113 0 0 chrX 83364381 83364575 -83285721 + Lx5 LINE L1 5741 5934 -1116 7 1221 4357 234 19 19 chrX 83364578 83365553 -83284743 + Lx5 LINE L1 6076 7050 0 7 1221 4750 112 0 4 chrX 83366211 83366901 -83283395 + Lx LINE L1 5968 6654 0 7 1221 6844 192 39 35 chrX 83367008 83367803 -83282493 + L1VL4 LINE L1 626 1410 -4467 7 1221 3494 55 7 0 chrX 83367803 83368242 -83282054 + L1Md_F2 LINE L1 6139 6580 -2 7 1221 6844 164 26 36 chrX 83368242 83368890 -83281406 + L1VL4 LINE L1 1411 2051 -3826 7 1221 471 18 0 0 chrX 83368890 83368946 -83281350 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 1221 843 26 0 26 chrX 83368946 83369063 -83281233 + (TA)n Simple_repeat Simple_repeat 1 114 0 7 1221 6844 164 26 36 chrX 83369063 83369406 -83280890 + L1VL4 LINE L1 2052 2393 -3484 7 1221 2798 44 3 12 chrX 83369406 83369751 -83280545 - ORR1A0 LTR MaLR -4 342 1 7 1221 6844 164 26 36 chrX 83369751 83370009 -83280287 + L1VL4 LINE L1 2394 2662 -3215 7 1221 5503 179 92 9 chrX 83370007 83371362 -83278934 + Lx2B LINE L1 5508 6990 -10 7 1221 778 307 31 55 chrX 83371389 83371679 -83278617 + B4 SINE B4 10 292 0 7 1221 1474 178 85 72 chrX 83372427 83372815 -83277481 + RLTR9C LTR ERVK 1 393 0 7 1221 275 224 23 23 chrX 83372816 83372903 -83277393 + MMETn-int LTR ERVK 1 87 -4757 7 1221 260 191 0 0 chrX 83372910 83372952 -83277344 + RLTR9C LTR ERVK 352 393 0 7 1221 315 0 0 0 chrX 83372955 83372990 -83277306 + (TG)n Simple_repeat Simple_repeat 1 35 0 7 1221 312 355 82 63 chrX 83372990 83373309 -83276987 + L1MCb LINE L1 602 926 -5825 7 1221 1579 237 71 47 chrX 83373440 83373800 -83276496 - Lx9 LINE L1 -846 6798 6320 7 1221 261 0 0 0 chrX 83373800 83373829 -83276467 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 7 1221 946 104 7 7 chrX 83373834 83373970 -83276326 - B1_Mus1 SINE Alu -12 136 1 7 1221 3933 229 53 39 chrX 83373970 83374829 -83275467 - Lx9 LINE L1 -1326 6318 5297 7 1221 180 0 0 0 chrX 83374829 83374849 -83275447 + (TTA)n Simple_repeat Simple_repeat 2 21 0 7 1221 3933 212 42 39 chrX 83374849 83375344 -83274952 - Lx9 LINE L1 -551 5296 4813 7 1221 3457 219 40 20 chrX 83375345 83376173 -83274123 + Lx9 LINE L1 6800 7643 -1 7 1221 460 258 117 5 chrX 83376226 83376440 -83273856 + L1MCb LINE L1 832 1069 -4976 7 1221 619 301 147 25 chrX 83376461 83376788 -83273508 + MLT1B LTR MaLR 20 386 -4 7 1221 1109 119 80 0 chrX 83377483 83377659 -83272637 + B2_Mm2 SINE B2 2 191 -4 7 1221 247 287 201 36 chrX 83377738 83377830 -83272466 + L1MCb LINE L1 1845 1947 -4804 7 1221 522 295 0 54 chrX 83377830 83377977 -83272319 - B1_Mur1 SINE Alu -10 139 1 7 1221 247 287 201 36 chrX 83377977 83378065 -83272231 + L1MCb LINE L1 1948 2035 -4716 7 1221 260 314 14 0 chrX 83378065 83378135 -83272161 + ID4_ SINE ID 2 72 -11 7 1221 247 287 201 36 chrX 83378135 83378474 -83271822 + L1MCb LINE L1 2036 2450 -4301 7 1221 445 288 64 12 chrX 83378505 83378727 -83271569 + B4A SINE B4 7 274 -18 7 1221 393 278 108 49 chrX 83378726 83378911 -83271385 + ID_B1 SINE B4 29 224 0 7 1221 573 55 0 0 chrX 83378955 83379028 -83271268 + (GA)n Simple_repeat Simple_repeat 2 74 0 7 1221 1205 96 0 6 chrX 83379028 83379207 -83271089 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 7 1221 1640 127 151 27 chrX 83379326 83379658 -83270638 + ORR1C1 LTR MaLR 1 373 -5 7 1221 1169 208 162 4 chrX 83379663 83379929 -83270367 - MTD LTR MaLR -111 308 1 7 1221 763 273 20 0 chrX 83380069 83380267 -83270029 + B3 SINE B2 5 206 -10 7 1221 27 62 0 0 chrX 83380272 83380320 -83269976 + AT_rich Low_complexity Low_complexity 1 48 0 7 1221 250 231 0 0 chrX 83380452 83380504 -83269792 + GA-rich Low_complexity Low_complexity 3 54 0 7 1221 1285 79 17 6 chrX 83380580 83380759 -83269537 + B2_Mm2 SINE B2 1 181 -14 7 1221 378 346 75 61 chrX 83380842 83381187 -83269109 + Lx9 LINE L1 7117 7466 -7 7 1221 735 116 0 0 chrX 83381187 83381308 -83268988 + (GGAA)n Simple_repeat Simple_repeat 2 122 0 7 1221 659 284 73 5 chrX 83381308 83381513 -83268783 + MTD LTR MaLR 196 414 -5 7 1221 971 276 60 50 chrX 83381514 83381934 -83268362 + L1MCb LINE L1 2877 3300 -3264 7 1221 272 253 0 42 chrX 83382377 83382472 -83267824 + (TATATG)n Simple_repeat Simple_repeat 1 91 0 8 1221 269 128 0 0 chrX 83382595 83382642 -83267654 + L1M2 LINE L1 5163 5209 -934 8 1221 6894 99 4 26 chrX 83382642 83383336 -83266960 + L1_Mus2 LINE L1 4998 5685 -198 8 1221 2583 20 0 0 chrX 83383336 83383633 -83266663 - L1Md_A LINE L1 0 6582 6286 8 1221 6894 90 1 33 chrX 83383633 83384535 -83265761 + L1_Mus2 LINE L1 5686 6565 -1 8 1221 326 342 42 24 chrX 83384540 83384705 -83265591 + L1M2 LINE L1 5192 5359 -784 8 1221 1275 182 33 64 chrX 83385159 83385488 -83264808 + Lx9 LINE L1 7322 7640 -4 8 1221 4689 51 5 2 chrX 83385622 83386207 -83264089 + LTRIS_Mus LTR ERV1 1 587 0 8 1221 5220 39 0 0 chrX 83386390 83387013 -83263283 - L1Md_T LINE L1 0 6582 5960 8 1221 396 281 90 104 chrX 83387885 83388107 -83262189 - ID_B1 SINE B4 -3 221 3 8 1221 357 271 56 9 chrX 83388118 83388226 -83262070 - PB1D10 SINE Alu -3 114 2 8 1221 246 81 0 0 chrX 83388605 83388642 -83261654 + (TCTCTG)n Simple_repeat Simple_repeat 4 40 0 8 1221 279 79 0 0 chrX 83388642 83388679 -83261617 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 1221 268 300 10 39 chrX 83388992 83389096 -83261200 + B4A SINE B4 1 101 -191 8 1221 468 272 94 12 chrX 83389656 83389827 -83260469 - MIRb SINE MIR -71 197 13 8 1221 291 28 0 0 chrX 83389849 83389885 -83260411 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 1221 240 140 20 0 chrX 83389886 83389936 -83260360 + (TA)n Simple_repeat Simple_repeat 1 51 0 8 1221 342 0 0 0 chrX 83390333 83390371 -83259925 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 8 1221 251 253 35 71 chrX 83390371 83390447 -83259849 - ID4_ SINE ID -7 76 2 8 1221 287 185 0 0 chrX 83390558 83390612 -83259684 + Lx9 LINE L1 7418 7471 -173 8 1221 477 34 0 0 chrX 83390614 83390673 -83259623 + (TG)n Simple_repeat Simple_repeat 1 59 0 8 1221 300 370 86 6 chrX 83390909 83391072 -83259224 + LTR16A1 LTR ERVL 177 352 -104 8 1221 1567 219 33 0 chrX 83391145 83391447 -83258849 + Lx5 LINE L1 6739 7050 0 8 1221 369 0 0 0 chrX 83391712 83391753 -83258543 + (TA)n Simple_repeat Simple_repeat 2 42 0 8 1221 273 401 15 8 chrX 83391844 83391977 -83258319 - MER91A DNA Tip100 -30 166 33 8 1221 1106 137 29 0 chrX 83392368 83392543 -83257753 + B2_Mm2 SINE B2 2 181 -14 8 1221 1571 82 9 0 chrX 83392636 83392856 -83257440 + L1_Mus1 LINE L1 6346 6567 0 8 1221 2111 38 0 15 chrX 83396529 83396794 -83253502 - L1Md_F3 LINE L1 -14 6570 6310 8 1221 253 372 75 38 chrX 83397067 83397360 -83252936 - L2 LINE L2 -378 3041 2738 8 1221 648 289 19 69 chrX 83398077 83398293 -83252003 + MER3 DNA MER1_type 1 205 -4 8 1221 298 320 90 0 chrX 83398366 83398466 -83251830 - PB1D10 SINE Alu -5 112 4 8 1221 1139 85 0 6 chrX 83398491 83398657 -83251639 + (GGGAGA)n Simple_repeat Simple_repeat 3 167 0 8 1221 314 386 0 0 chrX 83398722 83398823 -83251473 - PB1D10 SINE Alu -15 102 2 8 1221 776 212 41 6 chrX 83399247 83399419 -83250877 - RLTR13D6 LTR ERVK -807 176 1 8 1221 1414 293 54 9 chrX 83399421 83399845 -83250451 - Lx8 LINE L1 -235 7238 6796 8 1221 326 379 8 8 chrX 83400810 83400943 -83249353 + MER63A DNA AcHobo 2 134 -76 8 1221 383 375 134 23 chrX 83402135 83402588 -83247708 + L2 LINE L2 1953 2466 -953 8 1221 2449 95 120 0 chrX 83402588 83402955 -83247341 + RLTR10A LTR ERVK 1 411 0 8 1221 383 375 134 23 chrX 83402955 83403104 -83247192 + L2 LINE L2 2467 2621 -798 8 1221 2807 176 61 6 chrX 83403114 83403635 -83246661 - RMER1B Other Other -4 1062 513 8 1221 406 338 68 27 chrX 83404645 83404791 -83245505 + MER58A DNA MER1_type 1 152 -72 8 1221 25 0 0 0 chrX 83404892 83404917 -83245379 + AT_rich Low_complexity Low_complexity 1 25 0 8 1221 8189 123 79 6 chrX 83405083 83406479 -83243817 - Lx2 LINE L1 -1 6996 5491 8 1221 34 55 0 0 chrX 83406582 83406637 -83243659 + AT_rich Low_complexity Low_complexity 1 55 0 8 1221 673 349 105 32 chrX 83406712 83407245 -83243051 - L1MDa LINE L1 -4786 1847 1276 8 1221 254 359 37 19 chrX 83407714 83407822 -83242474 - B4 SINE B4 -14 278 169 8 1221 384 289 0 0 chrX 83408065 83408179 -83242117 - PB1D9 SINE Alu -5 115 2 8 1221 34 24 0 0 chrX 83408800 83408841 -83241455 + AT_rich Low_complexity Low_complexity 1 41 0 8 1221 446 284 55 63 chrX 83408846 83409083 -83241213 - MER33 DNA MER1_type -89 235 1 8 1221 330 152 0 0 chrX 83409191 83409250 -83241046 + (TG)n Simple_repeat Simple_repeat 1 59 0 8 1221 347 106 0 15 chrX 83409249 83409316 -83240980 + (GA)n Simple_repeat Simple_repeat 1 66 0 8 1221 307 345 60 18 chrX 83409418 83409586 -83240710 + LTR16D LTR ERVL 473 647 -4 8 1221 234 396 19 6 chrX 83409788 83409948 -83240348 - MIRb SINE MIR -8 260 99 8 1221 238 252 56 84 chrX 83410001 83410144 -83240152 + Zaphod DNA Tip100 410 548 -3483 8 1221 1306 199 118 0 chrX 83410559 83410821 -83239475 - Lx4A LINE L1 -10 7048 6756 8 1221 356 247 83 31 chrX 83410869 83410965 -83239331 - B3 SINE B2 -46 170 70 8 1221 2292 123 0 0 chrX 83411229 83411578 -83238718 - L1_Mur2 LINE L1 -1597 4280 3932 8 1221 339 261 11 0 chrX 83411571 83411663 -83238633 + L1_Mur3 LINE L1 5056 5148 -732 8 1221 690 180 0 0 chrX 83411663 83411774 -83238522 - MTD LTR MaLR -263 156 46 8 1221 358 184 105 0 chrX 83411789 83411903 -83238393 + L1_Mur3 LINE L1 5222 5347 -533 8 1221 1179 102 11 5 chrX 83411908 83412095 -83238201 + L1_Mus3 LINE L1 6451 6638 0 8 1221 285 202 81 23 chrX 83412107 83412193 -83238103 + Lx8 LINE L1 7382 7472 -1 8 1221 765 309 31 9 chrX 83412222 83412546 -83237750 + L1_Mur3 LINE L1 5351 5681 -199 8 1221 793 129 7 7 chrX 83412803 83412943 -83237353 + (TTTC)n Simple_repeat Simple_repeat 1 140 0 8 1221 564 225 196 13 chrX 83413034 83413187 -83237109 - MTD LTR MaLR -55 364 184 8 1221 3931 30 0 0 chrX 83413403 83413952 -83236344 - L1Md_F2 LINE L1 -536 6046 5498 8 1221 4214 55 4 6 chrX 83413952 83414482 -83235814 + L1Md_F2 LINE L1 6052 6580 -2 8 1221 240 350 10 20 chrX 83415033 83415132 -83235164 - L2c LINE L2 -4 3383 3286 8 1221 708 68 0 0 chrX 83415554 83415657 -83234639 + (CA)n Simple_repeat Simple_repeat 2 104 0 8 1221 394 242 55 24 chrX 83415909 83416036 -83234260 + LTR65 LTR ERV1 10 140 -529 8 1221 26 0 0 0 chrX 83416461 83416487 -83233809 + AT_rich Low_complexity Low_complexity 1 26 0 8 1221 379 301 43 29 chrX 83416543 83416683 -83233613 - B1F SINE Alu -7 142 1 8 1221 691 283 73 31 chrX 83416751 83417039 -83233257 - Lx8 LINE L1 -2 7471 7172 8 1221 429 220 0 0 chrX 83417107 83417198 -83233098 + Lx8 LINE L1 6841 6931 -542 8 1221 675 333 43 38 chrX 83417174 83417542 -83232754 + Lx8 LINE L1 7075 7444 -29 8 1221 234 275 0 28 chrX 83417571 83417642 -83232654 + CT-rich Low_complexity Low_complexity 5 73 0 8 1221 180 0 0 0 chrX 83418012 83418032 -83232264 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 8 1221 246 307 0 0 chrX 83418042 83418117 -83232179 + Lx8 LINE L1 6849 6923 -550 8 1221 455 259 50 26 chrX 83418308 83418448 -83231848 + B1F SINE Alu 6 149 0 8 1221 2927 60 3 0 chrX 83418494 83418874 -83231422 - L1Md_A LINE L1 0 6582 6202 8 1221 683 334 28 7 chrX 83418952 83419391 -83230905 + L1M4 LINE L1 3176 3625 -2521 8 1221 447 248 107 32 chrX 83419425 83419715 -83230581 - L1MA9 LINE L1 -18 6294 5970 8 1221 392 326 7 48 chrX 83419749 83419894 -83230402 - ID_B1 SINE B4 0 224 86 8 1221 365 203 72 51 chrX 83419897 83420044 -83230252 - L1MA9 LINE L1 -333 5967 5814 8 1221 825 47 0 0 chrX 83420064 83420170 -83230126 + (GA)n Simple_repeat Simple_repeat 2 107 0 8 1221 2082 224 77 20 chrX 83420466 83420958 -83229338 + Lx7 LINE L1 6739 7258 -438 8 1221 529 182 35 28 chrX 83421311 83421452 -83228844 + Lx9 LINE L1 7501 7642 -2 8 1221 721 303 183 34 chrX 83422373 83422701 -83227595 + MTEa LTR MaLR 3 379 0 8 1221 851 19 9 0 chrX 83422898 83423003 -83227293 + (TAG)n Simple_repeat Simple_repeat 1 106 0 8 1221 906 264 5 5 chrX 83423841 83424050 -83226246 - B3 SINE B2 -7 209 1 8 1221 198 0 0 0 chrX 83424454 83424476 -83225820 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1221 180 298 0 0 chrX 83425005 83425062 -83225234 + MER5B DNA MER1_type 119 175 -3 8 1221 377 262 93 0 chrX 83425082 83425189 -83225107 - MER5A1 DNA MER1_type -10 156 40 8 1221 891 314 119 23 chrX 83425273 83425981 -83224315 - L1MA4A LINE L1 -20 6283 5508 8 1221 30 27 0 0 chrX 83425985 83426022 -83224274 + AT_rich Low_complexity Low_complexity 1 37 0 8 1221 4830 107 29 66 chrX 83426139 83426835 -83223461 + RLTR13B4 LTR ERVK 1 659 -144 8 1221 2400 40 10 13 chrX 83426835 83427142 -83223154 + L1Md_F3 LINE L1 6277 6582 -2 8 1221 4830 107 29 66 chrX 83427142 83427279 -83223017 + RLTR13B4 LTR ERVK 660 803 0 8 1221 293 292 39 105 chrX 83428052 83428205 -83222091 - B1F1 SINE Alu -4 145 3 8 1221 420 20 0 0 chrX 83428226 83428251 -83222045 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 1221 261 0 0 0 chrX 83428251 83428280 -83222016 + (TC)n Simple_repeat Simple_repeat 1 29 0 8 1221 420 20 0 0 chrX 83428280 83428305 -83221991 + (CA)n Simple_repeat Simple_repeat 1 25 0 8 1221 366 112 21 43 chrX 83428302 83428395 -83221901 + (CAGAGA)n Simple_repeat Simple_repeat 6 96 0 8 1221 348 24 0 0 chrX 83429398 83429439 -83220857 + (TTTTC)n Simple_repeat Simple_repeat 2 42 0 8 1221 9895 85 21 11 chrX 83429855 83431711 -83218585 + Lx3_Mus LINE L1 5140 7009 0 8 1221 234 160 20 0 chrX 83431711 83431761 -83218535 - RLTR18B LTR ERVK -205 307 257 8 1221 589 287 73 17 chrX 83433481 83433658 -83216638 + ID_B1 SINE B4 4 190 -34 8 1221 396 0 0 0 chrX 83434124 83434168 -83216128 + (TAA)n Simple_repeat Simple_repeat 2 45 0 8 1221 225 256 0 0 chrX 83435001 83435044 -83215252 + polypurine Low_complexity Low_complexity 3 45 0 9 1221 824 283 185 26 chrX 83435070 83435494 -83214802 + MLT1D LTR MaLR 8 498 -7 9 1221 190 315 54 43 chrX 83435497 83435590 -83214706 - MIR SINE MIR -164 98 5 9 1221 659 238 154 16 chrX 83435605 83435793 -83214503 + Lx8 LINE L1 6906 7119 -354 9 1221 26 30 0 0 chrX 83435799 83435832 -83214464 + AT_rich Low_complexity Low_complexity 1 33 0 9 1221 477 182 0 0 chrX 83435979 83436078 -83214218 + GA-rich Low_complexity Low_complexity 1 99 0 9 1221 236 287 59 85 chrX 83436501 83436619 -83213677 - B1_Mus1 SINE Alu -5 143 29 9 1221 205 162 0 0 chrX 83438526 83438563 -83211733 + G-rich Low_complexity Low_complexity 1 37 0 9 1221 31 26 0 0 chrX 83441232 83441270 -83209026 + AT_rich Low_complexity Low_complexity 1 38 0 9 1221 382 273 52 15 chrX 83441886 83442020 -83208276 - B1F SINE Alu -10 139 1 9 1221 468 326 51 38 chrX 83442023 83442339 -83207957 - Charlie4a DNA MER1_type 0 508 189 9 1221 918 333 76 78 chrX 83442337 83442836 -83207460 - MER68 LTR ERVL -61 502 5 9 1221 342 301 126 10 chrX 83443678 83443876 -83206420 - MER68-int LTR ERVL -1754 1236 1016 9 1221 432 240 104 0 chrX 83444122 83444247 -83206049 + B1F SINE Alu 5 142 -7 9 1221 328 244 84 30 chrX 83444669 83444800 -83205496 - MER68-int LTR ERVL -2200 790 653 9 1221 800 344 74 30 chrX 83445007 83445469 -83204827 - MER68 LTR ERVL -11 552 71 9 1221 243 331 65 22 chrX 83445464 83445603 -83204693 - Charlie4a DNA MER1_type -337 171 27 9 1221 192 97 0 0 chrX 83445726 83445757 -83204539 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 1221 403 351 23 15 chrX 83445771 83445904 -83204392 - B3A SINE B2 -41 157 24 9 1221 245 267 20 82 chrX 83446099 83446197 -83204099 + B3A SINE B2 91 182 -16 9 1221 312 229 0 0 chrX 83446211 83446294 -83204002 + GA-rich Low_complexity Low_complexity 2 84 0 9 1221 1012 241 73 20 chrX 83446317 83446617 -83203679 + Lx6 LINE L1 7137 7452 -8 9 1221 527 206 66 7 chrX 83446874 83447011 -83203285 - Lx4B LINE L1 -4 7054 6910 9 1221 2924 140 32 20 chrX 83447011 83447565 -83202731 - Lx4B LINE L1 -891 6167 5607 9 1221 1314 204 14 17 chrX 83447560 83447854 -83202442 + Lx9 LINE L1 7157 7449 -195 9 1221 900 259 37 92 chrX 83447861 83448413 -83201883 + L1MA4A LINE L1 5308 5907 -396 9 1221 22 0 0 0 chrX 83448429 83448451 -83201845 + AT_rich Low_complexity Low_complexity 1 22 0 9 1221 457 369 22 49 chrX 83448587 83448626 -83201670 + B3A SINE B2 4 42 -156 9 1221 1777 163 0 52 chrX 83448626 83448970 -83201326 + ORR1A3 LTR MaLR 1 326 0 9 1221 457 319 31 85 chrX 83448970 83449153 -83201143 + B3A SINE B2 43 214 -2 9 1221 8181 153 12 6 chrX 83449184 83451125 -83199171 + Lx2B LINE L1 5039 7000 0 9 1221 1247 54 18 0 chrX 83451150 83451317 -83198979 - L1Md_F3 LINE L1 -2 6582 6413 9 1221 724 222 28 0 chrX 83451535 83451679 -83198617 + B3A SINE B2 1 148 -50 9 1221 405 0 0 0 chrX 83451714 83451759 -83198537 + (CA)n Simple_repeat Simple_repeat 1 45 0 9 1221 704 220 7 66 chrX 83451760 83451911 -83198385 + B1_Mur3 SINE Alu 6 147 -2 9 1221 358 332 130 65 chrX 83453452 83453774 -83196522 - ORR1E LTR MaLR -14 345 3 9 1221 763 245 44 5 chrX 83453943 83454148 -83196148 - B3 SINE B2 0 216 4 9 1221 727 294 22 5 chrX 83454508 83454693 -83195603 + B3A SINE B2 1 188 -10 9 1221 279 316 38 0 chrX 83454907 83454986 -83195310 + B1_Mur4 SINE Alu 12 93 -57 9 1221 198 0 0 0 chrX 83455394 83455416 -83194880 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 9 1221 712 233 259 4 chrX 83455733 83455873 -83194423 - Lx6 LINE L1 -5 7455 7296 9 1221 507 33 0 0 chrX 83455873 83455934 -83194362 + (TAAAA)n Simple_repeat Simple_repeat 5 65 0 9 1221 712 233 259 4 chrX 83455934 83456056 -83194240 - Lx6 LINE L1 -165 7295 7127 9 1221 248 83 0 0 chrX 83456055 83456091 -83194205 + Lx6 LINE L1 6763 6798 -662 9 1221 1718 242 90 23 chrX 83456086 83456598 -83193698 + Lx6 LINE L1 6587 7132 -328 9 1221 378 266 77 48 chrX 83456618 83456827 -83193469 - Lx8 LINE L1 -2 7471 7257 9 1221 477 0 0 0 chrX 83457281 83457334 -83192962 + (TG)n Simple_repeat Simple_repeat 1 53 0 9 1221 288 0 0 0 chrX 83457334 83457365 -83192931 + (GA)n Simple_repeat Simple_repeat 1 32 0 9 1221 702 279 110 27 chrX 83457383 83458012 -83192284 + L1M2 LINE L1 4352 5098 -1045 9 1221 3904 165 98 39 chrX 83458047 83458960 -83191336 + RMER17B LTR ERVK 2 958 0 9 1221 328 233 108 70 chrX 83458976 83459081 -83191215 + L1M2 LINE L1 5149 5284 -900 9 1221 198 0 0 0 chrX 83459081 83459103 -83191193 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 9 1221 337 243 25 19 chrX 83459103 83459264 -83191032 + L1M2 LINE L1 5285 5446 -738 9 1221 344 371 0 28 chrX 83459271 83459379 -83190917 + PB1D10 SINE Alu 13 117 0 9 1221 400 255 28 64 chrX 83459446 83459669 -83190627 + L1M1 LINE L1 5472 5687 -613 9 1221 801 307 57 4 chrX 83459689 83459934 -83190362 + B4A SINE B4 12 269 -23 9 1221 764 28 0 0 chrX 83461572 83461678 -83188618 + L1Md_T LINE L1 6475 6580 -2 9 1221 412 291 58 10 chrX 83461723 83461930 -83188366 + MIRb SINE MIR 6 223 -45 9 1221 22 0 0 0 chrX 83463067 83463089 -83187207 + AT_rich Low_complexity Low_complexity 1 22 0 9 1221 39181 9 0 6 chrX 83463178 83469571 -83180725 - L1Md_A LINE L1 0 6582 231 9 1221 2701 138 31 6 chrX 83469613 83470093 -83180203 + Lx2A1 LINE L1 4824 5315 -562 9 1221 2801 130 64 4 chrX 83470206 83470677 -83179619 - Lx2A1 LINE L1 -11 6997 6499 9 1221 771 141 7 0 chrX 83470684 83470826 -83179470 + Lx2A1 LINE L1 5920 6062 -946 9 1221 3537 110 32 8 chrX 83470825 83471420 -83178876 - Lx2A1 LINE L1 -485 6523 5915 9 1221 3079 150 20 20 chrX 83471419 83471832 -83178464 + Lx5 LINE L1 5318 5730 -147 9 1221 1131 68 7 0 chrX 83471832 83471979 -83178317 + B1_Mus1 SINE Alu 1 148 0 9 1221 228 35 0 0 chrX 83471979 83472008 -83178288 + (CAA)n Simple_repeat Simple_repeat 2 30 0 9 1221 3079 142 53 33 chrX 83472008 83472900 -83177396 + Lx5 LINE L1 5232 6733 -325 9 1221 8463 33 0 0 chrX 83472900 83473895 -83176401 + L1Md_T LINE L1 5587 6581 -1 9 1221 2945 265 131 64 chrX 83473895 83474222 -83176074 + Lx5 LINE L1 5587 5597 -286 9 1221 261 293 229 6 chrX 83474254 83474429 -83175867 + ID_B1 SINE B4 3 216 -8 9 1221 265 363 0 17 chrX 83474437 83474552 -83175744 - MamGypLTR1a LTR Gypsy -40 744 632 9 1221 239 327 44 80 chrX 83474592 83474705 -83175591 - MamGypLTR1a LTR Gypsy -278 506 398 9 1221 261 338 81 40 chrX 83474945 83475192 -83175104 + Tigger13a DNA MER2_type 5 261 -510 9 1221 24 0 0 0 chrX 83475232 83475256 -83175040 + AT_rich Low_complexity Low_complexity 1 24 0 9 1221 8582 108 34 1 chrX 83475336 83476867 -83173429 + Lx3B LINE L1 5388 6969 -4 9 1221 438 20 0 0 chrX 83476870 83476921 -83173375 + (TAA)n Simple_repeat Simple_repeat 3 53 0 9 1221 339 343 22 78 chrX 83477141 83477321 -83172975 + MLT1J1-int LTR MaLR 941 1110 -277 9 1221 402 375 19 13 chrX 83477346 83477500 -83172796 + MLT1J1-int LTR MaLR 1233 1387 0 9 1221 244 331 86 55 chrX 83477506 83477669 -83172627 + MLT1J1 LTR MaLR 7 174 -270 9 1221 499 276 52 46 chrX 83477704 83477898 -83172398 - B3A SINE B2 -2 196 2 9 1221 331 333 13 53 chrX 83477993 83478145 -83172151 - MamGypLTR1d LTR Gypsy 0 813 668 9 1221 2907 83 3 5 chrX 83478903 83479292 -83171004 + L1_Mus2 LINE L1 6171 6558 -8 9 1221 198 0 0 0 chrX 83479306 83479328 -83170968 + (TC)n Simple_repeat Simple_repeat 1 22 0 9 1221 441 0 0 0 chrX 83479329 83479378 -83170918 + (TA)n Simple_repeat Simple_repeat 1 49 0 9 1221 273 325 34 34 chrX 83479621 83479739 -83170557 + B1_Mus1 SINE Alu 1 118 -30 9 1221 3145 221 171 3 chrX 83479764 83480609 -83169687 + Lx9 LINE L1 6527 7514 -130 9 1221 225 65 0 0 chrX 83480609 83480640 -83169656 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 1221 3145 221 171 3 chrX 83480640 83480741 -83169555 + Lx9 LINE L1 7515 7632 -12 9 1221 590 135 10 0 chrX 83480753 83480857 -83169439 + (TA)n Simple_repeat Simple_repeat 1 105 0 9 1221 313 312 225 0 chrX 83481672 83481890 -83168406 - L1MA6 LINE L1 -46 6254 5988 9 1221 366 162 0 0 chrX 83483428 83483502 -83166794 + (CAGA)n Simple_repeat Simple_repeat 2 75 0 9 1221 297 0 0 0 chrX 83483502 83483535 -83166761 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 9 1221 22 35 0 0 chrX 83484077 83484106 -83166190 + AT_rich Low_complexity Low_complexity 1 29 0 9 1221 1485 259 124 59 chrX 83484379 83484986 -83165310 + Lx8 LINE L1 6741 7386 -87 9 1221 1703 253 44 14 chrX 83485067 83485496 -83164800 + RCHARR1 DNA MER1_type 3 444 -530 9 1221 441 328 97 27 chrX 83485495 83485752 -83164544 + B4A SINE B4 8 282 -10 9 1221 304 227 34 0 chrX 83485878 83485966 -83164330 + RCHARR1 DNA MER1_type 445 535 -439 9 1221 497 272 56 0 chrX 83485965 83486090 -83164206 + B1F2 SINE Alu 13 144 -5 9 1221 798 195 90 5 chrX 83486083 83486284 -83164012 + RCHARR1 DNA MER1_type 519 736 -238 9 1221 584 259 37 31 chrX 83486308 83486471 -83163825 - RSINE1 SINE B4 0 165 2 9 1221 1116 50 0 28 chrX 83486503 83486647 -83163649 + B1_Mus1 SINE Alu 1 140 -8 9 1221 6994 151 55 7 chrX 83486665 83487878 -83162418 + Lx4A LINE L1 5787 7057 -1 9 1221 369 351 23 0 chrX 83488051 83488182 -83162114 - ID_B1 SINE B4 -5 219 86 9 1221 2073 124 52 0 chrX 83488235 83488532 -83161764 - L1_Mur1 LINE L1 -301 5585 5289 9 1221 297 0 0 0 chrX 83488532 83488565 -83161731 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 9 1221 2073 124 52 0 chrX 83488565 83488613 -83161683 - L1_Mur1 LINE L1 -598 5288 5223 9 1221 288 0 0 0 chrX 83488640 83488672 -83161624 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 9 1221 496 150 0 0 chrX 83488672 83488752 -83161544 - L1_Mur1 LINE L1 -617 5269 5190 9 1221 485 185 0 18 chrX 83489189 83489299 -83160997 + (TATATG)n Simple_repeat Simple_repeat 6 113 0 9 1221 313 259 74 0 chrX 83489299 83489380 -83160916 + B4A SINE B4 45 131 -161 9 1221 285 329 0 0 chrX 83489403 83489485 -83160811 + B4A SINE B4 205 286 -6 9 1221 31 76 0 0 chrX 83489647 83489713 -83160583 + AT_rich Low_complexity Low_complexity 1 66 0 9 1221 292 315 78 11 chrX 83489978 83490068 -83160228 - RSINE1 SINE B4 -64 101 6 9 1221 354 282 128 0 chrX 83490292 83490409 -83159887 - B1F SINE Alu -6 143 12 9 1221 257 331 113 45 chrX 83490409 83490425 -83159871 - ID_B1 SINE B4 -6 218 77 9 1221 332 325 23 77 chrX 83490508 83490728 -83159568 + L1MEc LINE L1 16 223 -6177 9 1221 480 35 0 0 chrX 83490762 83490820 -83159476 + (CA)n Simple_repeat Simple_repeat 2 59 0 9 1221 915 289 26 52 chrX 83490970 83491237 -83159059 + MTEa LTR MaLR 2 261 -118 9 1221 232 48 48 0 chrX 83492712 83492754 -83157542 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1 1222 1418 274 35 40 chrX 83493411 83494421 -83155875 + Lx6 LINE L1 6085 7433 -27 1 1222 2771 230 88 41 chrX 83494685 83495546 -83154750 + RMER17A2 LTR ERVK 1 902 -4 1 1222 212 178 22 0 chrX 83498102 83498147 -83152149 - B4 SINE B4 -245 47 2 1 1222 570 236 49 21 chrX 83500401 83500544 -83149752 + B1_Mur1 SINE Alu 3 149 0 1 1222 2941 210 82 9 chrX 83502739 83503387 -83146909 - Lx2B LINE L1 -1 6999 6305 2 1222 3022 153 71 10 chrX 83503386 83503975 -83146321 + Lx2B LINE L1 4835 5459 -418 3 1222 311 78 20 0 chrX 83503975 83504026 -83146270 + (CAAAA)n Simple_repeat Simple_repeat 4 55 0 4 1222 5010 160 5 18 chrX 83504039 83504862 -83145434 + Lx LINE L1 5843 6654 0 5 1222 3054 188 22 72 chrX 83505157 83505414 -83144882 + Lx2B LINE L1 5450 5695 -191 3 1222 1157 89 14 0 chrX 83505414 83505560 -83144736 + B1_Mus1 SINE Alu 1 148 0 6 1222 3054 187 34 58 chrX 83505560 83506169 -83144127 + Lx2B LINE L1 5693 6296 -704 3 1222 1106 80 22 0 chrX 83506285 83506423 -83143873 + B1_Mus2 SINE Alu 2 142 -5 7 1222 893 245 14 47 chrX 83506665 83506879 -83143417 + B3 SINE B2 5 211 -5 8 1222 238 350 84 21 chrX 83507553 83507696 -83142600 + MIRb SINE MIR 78 229 -39 9 1222 229 324 0 0 chrX 83508019 83508087 -83142209 + RMER30 DNA MER1_type 133 200 -2 1 1222 399 73 0 0 chrX 83508150 83508205 -83142091 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1222 235 185 43 29 chrX 83508523 83508662 -83141634 + (TCTCTG)n Simple_repeat Simple_repeat 6 146 0 1 1222 586 269 74 43 chrX 83508707 83508870 -83141426 - B4 SINE B4 -16 276 109 1 1222 189 0 0 0 chrX 83509877 83509898 -83140398 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 1 1222 564 42 0 0 chrX 83509983 83510054 -83140242 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 1222 674 203 99 2 chrX 83511213 83511414 -83138882 - L1VL4 LINE L1 -5615 1040 796 1 1222 2952 55 0 88 chrX 83512344 83512744 -83137552 + RLTR10B2 LTR ERVK 1 365 0 1 1222 6940 117 14 21 chrX 83513217 83514313 -83135983 + L1_Mus3 LINE L1 5543 6631 -7 1 1222 617 238 13 39 chrX 83514337 83514490 -83135806 + B1_Mur1 SINE Alu 1 149 0 1 1222 207 0 0 0 chrX 83514499 83514522 -83135774 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1222 749 90 9 0 chrX 83514719 83514830 -83135466 + (TCC)n Simple_repeat Simple_repeat 3 114 0 2 1222 309 220 71 35 chrX 83515156 83515269 -83135027 + Lx8 LINE L1 7355 7471 -2 2 1222 223 290 16 0 chrX 83515680 83515742 -83134554 - PB1D9 SINE Alu -1 119 57 2 1222 399 89 0 0 chrX 83515878 83515934 -83134362 + (CAA)n Simple_repeat Simple_repeat 2 57 0 2 1222 3666 82 4 20 chrX 83516875 83517362 -83132934 + L1_Mus1 LINE L1 6087 6565 -2 2 1222 1278 84 6 0 chrX 83517682 83517849 -83132447 + L1_Mus2 LINE L1 6391 6558 -8 2 1222 222 191 0 31 chrX 83517849 83517914 -83132382 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 2 1222 445 274 8 25 chrX 83518149 83518269 -83132027 + ID_B1 SINE B4 80 197 -27 2 1222 3549 225 117 1 chrX 83518294 83519129 -83131167 + Lx9 LINE L1 6527 7458 -186 2 1222 504 32 0 0 chrX 83519138 83519200 -83131096 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 1222 315 172 117 11 chrX 83519207 83519301 -83130995 + Lx9 LINE L1 7529 7632 -12 2 1222 866 81 8 0 chrX 83519313 83519437 -83130859 + (TA)n Simple_repeat Simple_repeat 1 125 0 3 1222 392 307 228 0 chrX 83520265 83520480 -83129816 - L1MA6 LINE L1 -49 6251 5988 3 1222 366 162 0 0 chrX 83522028 83522102 -83128194 + (CAGA)n Simple_repeat Simple_repeat 2 75 0 3 1222 369 0 0 0 chrX 83522102 83522143 -83128153 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 3 1222 22 35 0 0 chrX 83522685 83522714 -83127582 + AT_rich Low_complexity Low_complexity 1 29 0 3 1222 1640 262 126 66 chrX 83522987 83523596 -83126700 + Lx8 LINE L1 6741 7386 -87 3 1222 1574 255 44 19 chrX 83523677 83524108 -83126188 + RCHARR1 DNA MER1_type 3 444 -530 3 1222 347 331 90 56 chrX 83524107 83524373 -83125923 + B4A SINE B4 8 282 -10 3 1222 269 239 34 0 chrX 83524498 83524586 -83125710 + RCHARR1 DNA MER1_type 445 535 -439 3 1222 449 269 66 16 chrX 83524585 83524706 -83125590 + B1F2 SINE Alu 13 139 -10 3 1222 432 0 0 0 chrX 83524706 83524754 -83125542 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 4 1222 820 194 94 0 chrX 83524755 83524946 -83125350 + RCHARR1 DNA MER1_type 528 736 -238 3 1222 658 286 18 12 chrX 83524970 83525133 -83125163 - RSINE1 SINE B4 0 165 2 4 1222 1126 95 0 26 chrX 83525165 83525316 -83124980 + B1_Mus1 SINE Alu 1 147 -1 4 1222 7689 150 42 8 chrX 83525332 83526556 -83123740 + Lx4A LINE L1 5792 7057 -1 4 1222 317 366 23 0 chrX 83526729 83526860 -83123436 - ID_B1 SINE B4 -5 219 86 4 1222 2528 123 39 0 chrX 83526913 83527214 -83123082 - L1_Mur1 LINE L1 -301 5585 5271 4 1222 306 0 0 0 chrX 83527214 83527248 -83123048 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 4 1222 2528 123 39 0 chrX 83527248 83527327 -83122969 - L1_Mur1 LINE L1 -616 5270 5191 4 1222 519 208 0 0 chrX 83527767 83527887 -83122409 + (TA)n Simple_repeat Simple_repeat 2 121 0 4 1222 300 247 82 0 chrX 83527887 83527960 -83122336 + B4A SINE B4 53 131 -161 4 1222 268 317 24 0 chrX 83527983 83528065 -83122231 + B4A SINE B4 205 288 -4 4 1222 27 73 0 0 chrX 83528241 83528296 -83122000 + AT_rich Low_complexity Low_complexity 1 55 0 4 1222 305 284 89 22 chrX 83528560 83528650 -83121646 - RSINE1 SINE B4 -64 101 6 5 1222 370 274 128 0 chrX 83528874 83528991 -83121305 - B1F SINE Alu -6 143 12 5 1222 270 323 113 45 chrX 83528991 83529007 -83121289 - ID_B1 SINE B4 -6 218 77 5 1222 322 328 25 55 chrX 83529090 83529290 -83121006 + L1MEc LINE L1 16 209 -6191 5 1222 876 20 0 0 chrX 83529344 83529446 -83120850 + (CA)n Simple_repeat Simple_repeat 2 103 0 5 1222 900 286 26 57 chrX 83529597 83529901 -83120395 + MTEa LTR MaLR 1 302 -77 5 1222 222 105 0 0 chrX 83531347 83531385 -83118911 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 5 1222 671 258 21 83 chrX 83532022 83532263 -83118033 + Lx2B LINE L1 6772 6997 -3 5 1222 1797 204 31 6 chrX 83532379 83532729 -83117567 - RLTR30 LTR ERV1 -2 377 19 5 1222 827 243 45 45 chrX 83533586 83533806 -83116490 + ID_B1 SINE B4 2 221 -3 5 1222 1368 224 128 8 chrX 83533853 83534123 -83116173 + Lx9 LINE L1 7206 7485 -159 6 1222 1675 150 81 177 chrX 83534123 83534529 -83115767 - ORR1B2 LTR MaLR 0 367 1 6 1222 204 125 0 0 chrX 83534536 83534568 -83115728 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 1222 1368 224 128 8 chrX 83534568 83534681 -83115615 + Lx9 LINE L1 7493 7642 -2 6 1222 235 271 0 0 chrX 83534811 83534859 -83115437 + ID4 SINE ID 9 56 -27 6 1222 895 214 0 6 chrX 83535678 83535838 -83114458 + Lx7 LINE L1 6456 6614 -1082 6 1222 189 0 0 0 chrX 83535848 83535869 -83114427 + (TGGG)n Simple_repeat Simple_repeat 1 21 0 6 1222 393 210 120 0 chrX 83535870 83535899 -83114397 + Lx2B LINE L1 6884 6912 -88 6 1222 195 42 0 0 chrX 83535899 83535923 -83114373 + (GGATG)n Simple_repeat Simple_repeat 3 26 0 6 1222 393 210 120 0 chrX 83535923 83535993 -83114303 + Lx2B LINE L1 6913 6993 -7 6 1222 4589 208 30 55 chrX 83535995 83536321 -83113975 + Lx7 LINE L1 6606 6921 -775 6 1222 4132 207 24 32 chrX 83536321 83537188 -83113108 - RMER13A LTR ERVK 0 860 1 6 1222 4589 208 30 55 chrX 83537188 83537976 -83112320 + Lx7 LINE L1 6922 7692 -4 6 1222 465 165 0 0 chrX 83538211 83538302 -83111994 - Lx LINE L1 -2 6652 6562 6 1222 4574 197 29 18 chrX 83538309 83539311 -83110985 + Lx2B LINE L1 5925 7058 0 7 1222 820 271 144 23 chrX 83540021 83540327 -83109969 - Lx8 LINE L1 -9 7464 7122 7 1222 976 114 56 14 chrX 83540458 83540600 -83109696 + B1_Mus1 SINE Alu 1 148 0 7 1222 21 0 0 0 chrX 83540688 83540709 -83109587 + AT_rich Low_complexity Low_complexity 1 21 0 7 1222 533 152 0 9 chrX 83540919 83541025 -83109271 + (TG)n Simple_repeat Simple_repeat 2 106 0 7 1222 2260 177 95 144 chrX 83541775 83542441 -83107855 + RMER1B Other Other 416 1048 -18 7 1222 1806 279 46 113 chrX 83542573 83543637 -83106659 + Lx5 LINE L1 6034 7046 -4 7 1222 2056 215 236 46 chrX 83543901 83544718 -83105578 + RMER17B LTR ERVK 1 954 -4 7 1222 252 313 167 12 chrX 83548786 83548870 -83101426 + RSINE1 SINE B4 34 130 -35 7 1222 261 0 0 0 chrX 83548893 83548922 -83101374 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1222 570 236 49 21 chrX 83549274 83549417 -83100879 + B1_Mur1 SINE Alu 3 149 0 8 1222 26 0 0 0 chrX 83549525 83549551 -83100745 + AT_rich Low_complexity Low_complexity 1 26 0 8 1222 24 0 0 0 chrX 83551619 83551643 -83098653 + AT_rich Low_complexity Low_complexity 1 24 0 8 1222 929 122 69 0 chrX 83551756 83551887 -83098409 + B1_Mm SINE Alu 2 141 -6 8 1222 893 245 14 47 chrX 83552127 83552341 -83097955 + B3 SINE B2 5 211 -5 8 1222 238 350 84 21 chrX 83553016 83553159 -83097137 + MIRb SINE MIR 78 229 -39 8 1222 236 271 752 9 chrX 83553442 83553551 -83096745 + RMER30 DNA MER1_type 11 200 -2 8 1222 279 0 0 0 chrX 83553616 83553647 -83096649 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 1222 542 182 0 6 chrX 83554037 83554197 -83096099 + CT-rich Low_complexity Low_complexity 2 160 0 8 1222 312 102 0 0 chrX 83554198 83554247 -83096049 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 1222 558 269 74 43 chrX 83554280 83554443 -83095853 - B4 SINE B4 -16 276 109 9 1222 206 0 69 0 chrX 83555451 83555480 -83094816 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 9 1222 474 18 0 0 chrX 83555558 83555613 -83094683 + (CA)n Simple_repeat Simple_repeat 2 56 0 9 1222 800 224 27 1 chrX 83556780 83557007 -83093289 - L1VL4 LINE L1 -5615 1040 796 9 1222 6862 116 16 27 chrX 83558399 83559500 -83090796 + L1_Mus3 LINE L1 5543 6631 -7 9 1222 514 269 0 39 chrX 83559524 83559679 -83090617 + B1_Mur1 SINE Alu 1 149 0 9 1222 270 0 0 0 chrX 83559679 83559709 -83090587 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 9 1222 298 107 18 18 chrX 83559903 83559960 -83090336 + (TCC)n Simple_repeat Simple_repeat 1 57 0 9 1222 977 67 8 0 chrX 83559962 83560096 -83090200 + (TTC)n Simple_repeat Simple_repeat 2 136 0 9 1222 281 220 71 35 chrX 83560411 83560524 -83089772 + Lx8 LINE L1 7355 7471 -2 9 1222 758 47 0 0 chrX 83560539 83560646 -83089650 - L1Md_T LINE L1 0 6582 6476 1 1222 276 170 0 0 chrX 83561250 83561303 -83088993 + (CAA)n Simple_repeat Simple_repeat 2 54 0 1 1222 726 81 0 0 chrX 83562252 83562351 -83087945 + B1_Mm SINE Alu 49 147 0 1 1222 473 273 94 14 chrX 83565060 83565416 -83084880 + L1MC1 LINE L1 5115 5491 -2504 1 1222 587 285 7 8 chrX 83565677 83565854 -83084442 + L1MC1 LINE L1 5508 5683 -491 1 1222 384 105 168 41 chrX 83565894 83566003 -83084293 - B2_Mm2 SINE B2 -9 184 47 1 1222 1151 104 40 0 chrX 83566016 83566189 -83084107 - B2_Mm2 SINE B2 -14 181 2 1 1222 322 215 63 21 chrX 83566191 83566286 -83084010 + L1MC1 LINE L1 5698 5796 -537 1 1222 1171 260 78 38 chrX 83566390 83566890 -83083406 + L1MC1 LINE L1 5813 6332 -1 1 1222 1372 267 36 13 chrX 83567097 83567488 -83082808 + Lx5 LINE L1 5953 6352 -698 1 1222 1785 230 8 47 chrX 83567489 83567872 -83082424 + Lx5 LINE L1 6678 7045 -5 1 1222 292 277 211 16 chrX 83567977 83568106 -83082190 + B4 SINE B4 2 126 -166 1 1222 280 179 0 0 chrX 83568148 83568204 -83082092 + B4 SINE B4 109 164 -128 1 1222 1328 84 0 26 chrX 83569285 83569480 -83080816 + B2_Mm2 SINE B2 2 191 -4 1 1222 558 328 19 54 chrX 83569942 83570200 -83080096 + RLTR26 LTR ERVK 168 416 -226 1 1222 2926 149 68 44 chrX 83570373 83570936 -83079360 + RMER1A Other Other 436 1011 -19 1 1222 256 248 106 71 chrX 83571373 83571486 -83078810 + L1_Rod LINE L1 2225 2341 -3506 1 1222 190 323 129 0 chrX 83571495 83571588 -83078708 + MIRb SINE MIR 45 149 -119 1 1222 644 203 29 0 chrX 83571899 83572037 -83078259 - B1_Mus1 SINE Alu -1 147 6 1 1222 28 29 0 0 chrX 83572857 83572892 -83077404 + AT_rich Low_complexity Low_complexity 1 35 0 1 1222 892 189 0 0 chrX 83577475 83577623 -83072673 - B1_Mus1 SINE Alu 0 148 1 1 1222 28 0 0 0 chrX 83577623 83577651 -83072645 + AT_rich Low_complexity Low_complexity 1 28 0 1 1222 814 232 40 0 chrX 83577651 83577828 -83072468 - B3 SINE B2 -6 210 27 1 1222 1466 76 0 5 chrX 83577962 83578160 -83072136 - L1_Mus1 LINE L1 0 6567 6371 1 1222 2275 69 3 0 chrX 83578160 83578448 -83071848 + L1_Mus1 LINE L1 6095 6383 -184 1 1222 219 139 0 0 chrX 83578748 83578784 -83071512 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1222 283 288 69 32 chrX 83578792 83578840 -83071456 - PB1 SINE Alu 0 148 101 1 1222 1101 51 43 0 chrX 83578840 83578978 -83071318 - B1_Mus1 SINE Alu 0 148 5 1 1222 459 258 11 0 chrX 83578979 83579072 -83071224 - ID_B1 SINE B4 -45 179 86 1 1222 24 53 0 0 chrX 83579080 83579118 -83071178 + AT_rich Low_complexity Low_complexity 1 38 0 1 1222 2363 94 25 11 chrX 83579165 83579519 -83070777 - L1_Mus3 LINE L1 0 6638 6280 1 1222 259 306 0 0 chrX 83579855 83579927 -83070369 - MurSatRep1 Unknown Unknown -1870 267 196 1 1222 1364 98 16 0 chrX 83580963 83581146 -83069150 - B2_Mm2 SINE B2 -8 187 2 1 1222 290 321 51 80 chrX 83584684 83584860 -83065436 + RLTR14-int LTR ERV1 2627 2797 -4804 1 1222 297 328 22 29 chrX 83584988 83585126 -83065170 + RLTR6-int LTR ERV1 4923 5059 -2719 1 1222 399 316 74 89 chrX 83585220 83585449 -83064847 + RLTR14-int LTR ERV1 3543 3762 -1555 1 1222 1152 138 10 26 chrX 83585449 83585642 -83064654 + B2_Mm1t SINE B2 1 190 -3 1 1222 399 316 74 89 chrX 83585642 83585815 -83064481 + RLTR14-int LTR ERV1 3763 3939 -1378 1 1222 569 14 14 0 chrX 83585960 83586030 -83064266 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 1 1222 888 184 129 23 chrX 83586967 83587184 -83063112 + Lx2B LINE L1 6757 6996 -4 1 1222 476 162 9 116 chrX 83588348 83588460 -83061836 + RMER15 LTR ERVL 1 100 -475 1 1222 1489 205 24 229 chrX 83588450 83588729 -83061567 + RMER15 LTR ERVL 47 229 -346 1 1222 1038 100 0 0 chrX 83588729 83588909 -83061387 + (CAG)n Simple_repeat Simple_repeat 1 180 0 1 1222 1489 205 24 229 chrX 83588909 83589294 -83061002 + RMER15 LTR ERVL 230 575 0 1 1222 507 320 35 35 chrX 83591670 83591958 -83058338 + B4 SINE B4 4 291 -1 1 1222 1085 82 0 0 chrX 83594115 83594250 -83056046 + B1_Mus1 SINE Alu 2 136 -12 1 1222 540 0 0 0 chrX 83594250 83594310 -83055986 + (CAAAA)n Simple_repeat Simple_repeat 3 62 0 1 1222 432 0 0 0 chrX 83594903 83594951 -83055345 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1222 5771 62 0 10 chrX 83594951 83595682 -83054614 - L1_Mus2 LINE L1 -42 6524 5801 1 1222 319 88 27 93 chrX 83597904 83597979 -83052317 - Lx LINE L1 -5 6976 6907 1 1222 1188 115 52 0 chrX 83598843 83599035 -83051261 - Lx LINE L1 0 6654 6453 1 1222 264 408 15 15 chrX 83599721 83599853 -83050443 - RSINE1 SINE B4 -23 142 11 1 1222 774 218 12 83 chrX 83600782 83600915 -83049381 - URR1A DNA MER1_type -1 225 95 1 1222 1157 57 0 0 chrX 83600915 83601056 -83049240 + B1_Mm SINE Alu 1 141 -6 1 1222 225 83 0 0 chrX 83601057 83601093 -83049203 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1 1222 774 218 12 83 chrX 83601093 83601197 -83049099 - URR1A DNA MER1_type -132 94 3 1 1222 648 328 22 38 chrX 83602077 83602391 -83047905 + Lx6 LINE L1 7138 7446 -14 1 1222 959 173 59 47 chrX 83602383 83602619 -83047677 - Lx2B LINE L1 0 7000 6762 1 1222 22 0 0 0 chrX 83603493 83603515 -83046781 + AT_rich Low_complexity Low_complexity 1 22 0 1 1222 1011 68 0 43 chrX 83603629 83603768 -83046528 + B1_Mm SINE Alu 1 133 -14 1 1222 283 392 0 26 chrX 83603871 83604023 -83046273 + B1F SINE Alu 1 148 -1 1 1222 374 218 38 13 chrX 83604147 83604226 -83046070 + B3A SINE B2 2 82 -116 1 1222 1919 197 114 19 chrX 83604270 83604735 -83045561 - RMER5 LTR ERV1 -25 509 1 1 1222 27 0 0 0 chrX 83605549 83605576 -83044720 + AT_rich Low_complexity Low_complexity 1 27 0 1 1222 23 0 0 0 chrX 83606212 83606235 -83044061 + AT_rich Low_complexity Low_complexity 1 23 0 1 1222 23 54 0 0 chrX 83606589 83606626 -83043670 + AT_rich Low_complexity Low_complexity 1 37 0 1 1222 4719 59 13 5 chrX 83606901 83607500 -83042796 + L1Md_F2 LINE L1 5979 6582 0 1 1222 1258 170 0 22 chrX 83608133 83608361 -83041935 + URR1B DNA MER1_type 3 225 0 1 1222 3534 147 5 12 chrX 83609165 83609731 -83040565 - Lx2B LINE L1 -1 6999 6438 1 1222 254 204 0 0 chrX 83609740 83609789 -83040507 + L1VL2 LINE L1 444 492 -5843 1 1222 23 0 0 0 chrX 83609942 83609965 -83040331 + AT_rich Low_complexity Low_complexity 1 23 0 1 1222 21 0 0 0 chrX 83610091 83610112 -83040184 + AT_rich Low_complexity Low_complexity 1 21 0 1 1222 1359 238 23 36 chrX 83610495 83610879 -83039417 - RMER19C LTR ERVK -4 607 229 1 1222 753 317 52 4 chrX 83611284 83611553 -83038743 - B4A SINE B4 -2 290 9 1 1222 1346 217 28 7 chrX 83612154 83612442 -83037854 - Lx6 LINE L1 -8 7452 7159 1 1222 2632 89 62 3 chrX 83612557 83612896 -83037400 - RLTR10D LTR ERVK 0 359 1 1 1222 451 322 68 93 chrX 83612979 83613248 -83037048 + RMER20B LTR ERVK 215 471 -171 1 1222 1174 240 141 7 chrX 83613461 83613767 -83036529 - Lx6 LINE L1 -298 7162 6816 1 1222 1238 246 43 17 chrX 83613786 83614088 -83036208 + Lx6 LINE L1 6482 6791 -669 1 1222 210 71 0 0 chrX 83614432 83614460 -83035836 + (TCTG)n Simple_repeat Simple_repeat 3 30 0 1 1222 552 134 0 0 chrX 83614462 83614559 -83035737 + (TC)n Simple_repeat Simple_repeat 2 98 0 1 1222 276 30 0 0 chrX 83614559 83614592 -83035704 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1222 284 282 92 23 chrX 83614988 83615075 -83035221 - B3A SINE B2 -19 179 87 1 1222 245 295 0 10 chrX 83617506 83617602 -83032694 + Lx9 LINE L1 7396 7490 -154 1 1222 342 212 104 43 chrX 83617638 83617801 -83032495 + Lx9 LINE L1 7472 7644 0 1 1222 472 235 0 25 chrX 83617823 83617941 -83032355 + B1_Mur2 SINE Alu 32 146 -3 1 1222 236 323 62 110 chrX 83618644 83618790 -83031506 - MLT1J2 LTR MaLR -82 366 228 1 1222 186 103 0 0 chrX 83618831 83618860 -83031436 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1 1222 252 0 0 0 chrX 83619179 83619207 -83031089 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1222 492 18 0 0 chrX 83622384 83622441 -83027855 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 1 1222 283 349 23 53 chrX 83622523 83622536 -83027760 - RSINE1 SINE B4 -2 163 150 1 1222 288 0 0 0 chrX 83622536 83622568 -83027728 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1222 283 349 23 53 chrX 83622568 83622687 -83027609 - RSINE1 SINE B4 -16 149 35 1 1222 24 53 0 0 chrX 83622707 83622745 -83027551 + AT_rich Low_complexity Low_complexity 1 38 0 1 1222 224 378 55 8 chrX 83622774 83622902 -83027394 - RSINE1 SINE B4 -29 136 3 1 1222 3972 202 10 21 chrX 83623095 83623818 -83026478 - Lx5 LINE L1 0 7050 6336 1 152 1441 93 24 0 chrX 83623819 83624024 -83026272 - Lx5 LINE L1 -1163 5887 5678 1 1223 444 142 52 11 chrX 83624011 83624111 -83026185 + L1_Mur2 LINE L1 4241 4363 -1780 1 1223 1418 122 0 10 chrX 83624345 83624552 -83025744 - MTC LTR MaLR -8 413 209 1 1223 298 119 0 0 chrX 83624552 83624594 -83025702 + Lx5 LINE L1 6330 6371 -679 1 1223 1681 167 24 10 chrX 83624594 83624885 -83025411 + ORR1B2 LTR MaLR 55 349 -18 1 1223 381 22 0 0 chrX 83624892 83624938 -83025358 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1223 435 317 45 78 chrX 83624975 83625129 -83025167 - B4A SINE B4 -141 151 3 1 1223 23 0 0 0 chrX 83626914 83626937 -83023359 + AT_rich Low_complexity Low_complexity 1 23 0 1 1223 1052 75 0 0 chrX 83626988 83627122 -83023174 + B1_Mm SINE Alu 9 142 -5 1 1223 195 188 0 0 chrX 83627247 83627295 -83023001 + A-rich Low_complexity Low_complexity 5 52 0 1 1223 913 43 9 0 chrX 83627295 83627410 -83022886 + B1_Mm SINE Alu 32 147 0 1 1223 1023 323 56 20 chrX 83627701 83628147 -83022149 - Lx8 LINE L1 -6 7467 7006 1 1223 1119 212 42 2 chrX 83628154 83628399 -83021897 - Lx3C LINE L1 0 7000 6738 1 1223 3168 94 50 5 chrX 83628473 83628890 -83021406 - RLTR10C LTR ERVK 0 436 1 1 1223 271 321 75 6 chrX 83629920 83630080 -83020216 + MIRb SINE MIR 73 243 -25 1 1223 303 96 0 0 chrX 83630317 83630369 -83019927 + (TCTG)n Simple_repeat Simple_repeat 2 53 0 1 1223 473 345 79 46 chrX 83630401 83630617 -83019679 - B4A SINE B4 -67 225 3 1 1223 501 162 0 0 chrX 83631401 83631512 -83018784 + CT-rich Low_complexity Low_complexity 2 112 0 1 1223 384 22 0 0 chrX 83631512 83631557 -83018739 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1223 293 189 11 0 chrX 83632281 83632371 -83017925 + CT-rich Low_complexity Low_complexity 2 92 0 1 1223 462 356 38 8 chrX 83632544 83632782 -83017514 - Lx8 LINE L1 -467 7006 6762 2 1223 271 75 25 0 chrX 83634033 83634073 -83016223 - MT2_Mm LTR ERVL 0 493 453 2 1223 267 79 0 0 chrX 83634127 83634165 -83016131 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1223 1004 242 66 12 chrX 83634180 83634472 -83015824 - MT2B LTR ERVL -47 554 73 2 1223 7031 88 30 3 chrX 83634480 83635970 -83014326 + L1_Mus2 LINE L1 5032 6566 0 2 1223 236 268 0 0 chrX 83635974 83636030 -83014266 - Lx6 LINE L1 -311 7149 7094 2 1223 6471 30 18 3 chrX 83636614 83637343 -83012953 + L1Md_F3 LINE L1 5845 6584 0 2 1223 509 329 19 19 chrX 83637959 83638120 -83012176 - RSINE1 SINE B4 -4 161 1 2 1223 1084 237 61 82 chrX 83638724 83639115 -83011181 + ORR1C2 LTR MaLR 1 383 -1 2 1223 23 33 0 0 chrX 83639486 83639516 -83010780 + AT_rich Low_complexity Low_complexity 1 30 0 2 1223 423 258 94 24 chrX 83640069 83640196 -83010100 + B1F SINE Alu 13 148 -1 2 1223 262 324 72 0 chrX 83640435 83640546 -83009750 + MIRb SINE MIR 116 234 -34 2 1223 874 224 84 43 chrX 83640906 83641223 -83009073 - ORR1D1 LTR MaLR -10 364 1 2 1223 881 177 43 0 chrX 83641223 83641387 -83008909 - ORR1D1-int LTR MaLR 0 1370 1200 2 1223 1325 110 16 11 chrX 83641398 83641582 -83008714 + B2_Mm2 SINE B2 2 186 -9 2 1223 524 149 180 8 chrX 83641613 83641735 -83008561 - Lx4A LINE L1 -2 7056 6914 2 1223 343 288 108 75 chrX 83642283 83642403 -83007893 - RSINE1 SINE B4 -39 126 3 2 1223 206 240 0 20 chrX 83645600 83645651 -83004645 + CT-rich Low_complexity Low_complexity 2 51 0 2 1223 201 269 0 25 chrX 83645875 83645955 -83004341 + T-rich Low_complexity Low_complexity 1 78 0 2 1223 889 149 251 5 chrX 83647409 83647604 -83002692 - Lx4A LINE L1 -5 7053 6811 2 1223 462 143 0 0 chrX 83649251 83649328 -83000968 + (TATATG)n Simple_repeat Simple_repeat 4 80 0 2 1223 336 343 0 19 chrX 83649557 83649664 -83000632 + PB1D10 SINE Alu 6 110 -7 2 1223 280 328 0 0 chrX 83649688 83649749 -83000547 + ID4_ SINE ID 2 62 -21 2 1223 837 261 132 105 chrX 83649837 83650283 -83000013 + RLTR28B LTR ERVL 1 458 -23 2 1223 1248 68 0 7 chrX 83650364 83650512 -82999784 - B1_Mus1 SINE Alu -1 147 1 2 1223 559 300 0 0 chrX 83650601 83650741 -82999555 + B1F SINE Alu 1 140 -9 2 1223 27 73 0 0 chrX 83650868 83650923 -82999373 + AT_rich Low_complexity Low_complexity 1 55 0 2 1223 2420 185 112 57 chrX 83650940 83651397 -82998899 + RMER15 LTR ERVL 1 504 -71 2 1223 459 0 0 0 chrX 83651397 83651448 -82998848 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 1223 2420 185 112 57 chrX 83651448 83651464 -82998832 + RMER15 LTR ERVL 505 505 -70 2 1223 877 118 0 16 chrX 83651464 83651585 -82998711 - 5S rRNA rRNA -1 120 2 2 1223 2420 185 112 57 chrX 83651585 83651655 -82998641 + RMER15 LTR ERVL 506 575 0 2 1223 876 51 17 8 chrX 83651871 83651990 -82998306 - B2_Mm2 SINE B2 -9 186 67 2 1223 195 42 0 0 chrX 83652855 83652879 -82997417 + (TTG)n Simple_repeat Simple_repeat 1 24 0 2 1223 2785 135 4 32 chrX 83653226 83653692 -82996604 + L1_Mur2 LINE L1 5114 5566 -311 2 1223 22 0 0 0 chrX 83654646 83654668 -82995628 + AT_rich Low_complexity Low_complexity 1 22 0 2 1223 186 43 0 0 chrX 83655530 83655553 -82994743 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 2 1223 7032 6 0 5 chrX 83655752 83656534 -82993762 + L1Md_A LINE L1 4809 5586 -297 2 1223 9607 3 0 0 chrX 83656535 83657530 -82992766 + L1Md_A LINE L1 5588 6582 0 2 1223 4910 207 16 48 chrX 83658071 83659165 -82991131 + Lx5 LINE L1 5987 7046 -4 2 1223 297 0 0 0 chrX 83659167 83659200 -82991096 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 2 1223 3737 183 94 33 chrX 83659283 83660841 -82989455 + L1_Mur3 LINE L1 262 1923 -3957 2 1223 209 132 26 0 chrX 83660963 83661001 -82989295 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 2 1223 3864 151 15 14 chrX 83661002 83661585 -82988711 - Lx4A LINE L1 -2 7056 6473 2 1223 2667 274 74 45 chrX 83661585 83662555 -82987741 + Lx8 LINE L1 6474 7471 -2 2 1223 21 36 0 0 chrX 83662555 83662583 -82987713 + AT_rich Low_complexity Low_complexity 1 28 0 2 1223 288 292 201 34 chrX 83662834 83663043 -82987253 + Lx8 LINE L1 7151 7394 -79 2 1223 498 188 69 10 chrX 83664626 83664728 -82985568 - B3 SINE B2 0 216 109 2 1223 243 351 113 35 chrX 83664852 83664967 -82985329 - RSINE1 SINE B4 -26 139 16 2 1223 741 236 92 25 chrX 83665079 83665275 -82985021 - B3 SINE B2 -5 211 3 2 1223 235 307 10 10 chrX 83665298 83665400 -82984896 - L1MCa LINE L1 -3886 2435 2334 2 1223 1867 141 100 9 chrX 83665415 83665744 -82984552 - ORR1B2 LTR MaLR -8 359 1 2 1223 309 333 80 36 chrX 83665847 83665984 -82984312 - B1F2 SINE Alu -2 147 5 2 1223 502 205 118 47 chrX 83665987 83666156 -82984140 - L1MCa LINE L1 -4290 2218 2038 2 1223 1904 143 20 69 chrX 83666169 83666515 -82983781 + ORR1A4 LTR MaLR 1 329 0 2 1223 887 236 16 11 chrX 83666549 83666737 -82983559 + RMER15 LTR ERVL 3 191 -384 2 1223 2272 130 14 11 chrX 83666744 83667101 -82983195 - ORR1B2 LTR MaLR -9 358 1 2 1223 1909 168 114 0 chrX 83667101 83667448 -82982848 + RMER15 LTR ERVL 173 559 -16 2 1223 2710 253 16 2 chrX 83667479 83668101 -82982195 + RMER15-int LTR ERVL 1 631 -4368 2 1223 5406 229 32 12 chrX 83668084 83669354 -82980942 + RMER15-int LTR ERVL 753 2048 -2951 2 1223 1607 185 100 12 chrX 83669355 83669535 -82980761 - ORR1C2 LTR MaLR 0 384 189 2 1223 210 91 0 0 chrX 83669535 83669568 -82980728 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 2 1223 1607 185 100 12 chrX 83669568 83669585 -82980711 - ORR1C2 LTR MaLR -196 188 172 2 1223 783 21 0 0 chrX 83669585 83669678 -82980618 + (GA)n Simple_repeat Simple_repeat 2 94 0 2 1223 1607 185 100 12 chrX 83669678 83669818 -82980478 - ORR1C2 LTR MaLR -213 171 16 2 1223 712 189 101 0 chrX 83669831 83670000 -82980296 - Lx3C LINE L1 -2 6974 6789 2 1223 1145 265 19 58 chrX 83670011 83670372 -82979924 + RMER15-int LTR ERVL 2043 2389 -2610 2 1223 5143 117 14 30 chrX 83670418 83671808 -82978488 - L1VL4 LINE L1 -3804 2079 725 2 1223 505 217 15 8 chrX 83671814 83671944 -82978352 - L1VL4 LINE L1 -5811 805 675 2 1223 381 288 49 50 chrX 83671961 83672293 -82978003 - L1VL1 LINE L1 -5926 496 174 2 1223 2328 244 87 22 chrX 83672339 83673108 -82977188 + RMER15-int LTR ERVL 4155 4973 -26 2 1223 608 129 20 10 chrX 83673108 83673210 -82977086 + RMER15 LTR ERVL 1 103 -472 2 1223 776 89 146 0 chrX 83673210 83673333 -82976963 - L1_Mur1 LINE L1 -277 5609 5469 2 1223 7042 91 8 7 chrX 83673331 83674374 -82975922 + L1_Mus4 LINE L1 5587 6630 -6 2 1223 776 156 39 39 chrX 83674418 83674571 -82975725 + RMER15 LTR ERVL 92 244 -331 2 1223 687 188 55 74 chrX 83674546 83674780 -82975516 - RLTR41 LTR ERV1 -175 271 1 2 1223 548 354 75 0 chrX 83674819 83675113 -82975183 - L1MCa LINE L1 -5403 1348 1033 2 1223 326 341 28 14 chrX 83675221 83675432 -82974864 - L1MCa LINE L1 -5221 824 611 2 1223 651 329 101 28 chrX 83675440 83675943 -82974353 - L1MCa LINE L1 -5909 842 303 2 1223 648 38 0 0 chrX 83675970 83676049 -82974247 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 2 1223 612 0 0 0 chrX 83676110 83676178 -82974118 + (TC)n Simple_repeat Simple_repeat 1 68 0 2 1223 456 271 29 29 chrX 83676179 83676316 -82973980 - B1_Mur2 SINE Alu -10 139 3 2 1223 426 349 87 0 chrX 83676847 83676996 -82973300 - ID_B1 SINE B4 -59 165 4 2 1223 22 0 0 0 chrX 83677175 83677197 -82973099 + AT_rich Low_complexity Low_complexity 1 22 0 2 1223 12429 110 14 5 chrX 83677232 83680018 -82970278 - L1_Mus3 LINE L1 -1 6637 3826 2 1223 2916 196 22 17 chrX 83680014 83680703 -82969593 - L1VL4 LINE L1 -5332 970 279 2 1223 539 241 28 21 chrX 83680816 83680960 -82969336 + B1_Mur1 SINE Alu 2 146 -3 2 1223 1683 92 0 12 chrX 83681137 83681391 -82968905 - L1_Mus1 LINE L1 -555 6011 5761 2 1223 3910 80 30 2 chrX 83681391 83681919 -82968377 + L1_Mus1 LINE L1 6024 6566 -1 2 1223 1112 324 41 34 chrX 83682117 83682532 -82967764 + MTEa-int LTR MaLR 1158 1575 -5 2 1223 443 328 125 89 chrX 83682537 83682898 -82967398 + MTEa LTR MaLR 1 374 -5 2 1223 623 299 24 67 chrX 83682911 83683119 -82967177 - MLT2B2 LTR ERVL -316 199 1 2 1223 222 254 50 17 chrX 83683311 83683371 -82966925 + B3A SINE B2 13 74 -124 2 1223 28 0 0 0 chrX 83684067 83684095 -82966201 + AT_rich Low_complexity Low_complexity 1 28 0 2 1223 2262 144 24 8 chrX 83684161 83684538 -82965758 - ORR1B1 LTR MaLR -8 386 4 2 1223 183 114 0 0 chrX 83686215 83686250 -82964046 + (T)n Simple_repeat Simple_repeat 1 35 0 2 1223 23 78 0 0 chrX 83687340 83687391 -82962905 + AT_rich Low_complexity Low_complexity 1 51 0 2 1223 23 0 0 0 chrX 83687471 83687494 -82962802 + AT_rich Low_complexity Low_complexity 1 23 0 2 1223 3449 78 53 2 chrX 83687494 83687969 -82962327 - L1_Mus3 LINE L1 -8 6630 6132 2 1223 21 36 0 0 chrX 83688413 83688441 -82961855 + AT_rich Low_complexity Low_complexity 1 28 0 2 1223 682 278 0 70 chrX 83689199 83689400 -82960896 + B3A SINE B2 5 191 -7 2 1223 720 319 12 0 chrX 83689424 83689584 -82960712 + B3 SINE B2 1 162 -54 2 1223 498 75 0 0 chrX 83689608 83689675 -82960621 + (CA)n Simple_repeat Simple_repeat 1 67 0 2 1223 1290 240 34 22 chrX 83689708 83690028 -82960268 - RMER15 LTR ERVL -249 326 3 2 1223 193 229 68 54 chrX 83690148 83690222 -82960074 + L3 LINE CR1 3566 3640 -849 2 1223 228 300 0 16 chrX 83690842 83690903 -82959393 + ID4_ SINE ID 3 62 -21 2 1223 273 245 10 69 chrX 83691244 83691345 -82958951 + L2a LINE L2 3327 3421 -5 2 1223 279 351 27 9 chrX 83691521 83691633 -82958663 + MIRc SINE MIR 51 164 -104 2 1223 28 48 0 0 chrX 83691784 83691826 -82958470 + AT_rich Low_complexity Low_complexity 1 42 0 2 1223 550 227 105 8 chrX 83691828 83691961 -82958335 + B1_Mur1 SINE Alu 3 148 -1 2 1223 1944 97 73 7 chrX 83692054 83692355 -82957941 + Lx3_Mus LINE L1 6678 6998 -11 2 1223 24 32 0 0 chrX 83692634 83692665 -82957631 + AT_rich Low_complexity Low_complexity 1 31 0 2 1223 387 0 0 0 chrX 83693034 83693077 -82957219 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1223 226 312 10 50 chrX 83693087 83693188 -82957108 - L2c LINE L2 -33 3354 3258 2 1223 251 281 15 15 chrX 83693323 83693388 -82956908 + ID_B1 SINE B4 79 143 -81 2 1223 362 339 25 8 chrX 83693332 83693394 -82956902 + PB1 SINE Alu 7 71 -56 2 1223 1388 178 87 84 chrX 83693394 83693775 -82956521 - ORR1C2 LTR MaLR -2 382 1 2 1223 362 339 25 8 chrX 83693775 83693831 -82956465 + PB1 SINE Alu 72 126 -1 2 1223 512 363 91 42 chrX 83693937 83694222 -82956074 + MLT2F LTR ERVL 237 535 -128 2 1223 3360 40 0 5 chrX 83694223 83694628 -82955668 + L1Md_F2 LINE L1 6180 6582 0 2 1223 22 56 0 0 chrX 83694629 83694665 -82955631 + AT_rich Low_complexity Low_complexity 1 36 0 3 1223 378 0 0 0 chrX 83694744 83694786 -82955510 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1223 422 276 27 54 chrX 83695057 83695130 -82955166 + ID_B1 SINE B4 94 168 -56 3 1223 1807 194 47 0 chrX 83695130 83695491 -82954805 + ORR1C1 LTR MaLR 1 378 0 3 1223 422 276 27 54 chrX 83695491 83695528 -82954768 + ID_B1 SINE B4 169 201 -23 3 1223 270 380 65 0 chrX 83696031 83696123 -82954173 + MER119 DNA MER1_type 5 102 -481 3 1223 996 284 41 41 chrX 83696158 83696348 -82953948 + MER119 DNA MER1_type 186 376 -207 3 1223 1146 37 0 7 chrX 83696348 83696485 -82953811 + B1_Mus2 SINE Alu 1 136 -11 3 1223 306 50 0 0 chrX 83696485 83696525 -82953771 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 3 1223 293 293 67 0 chrX 83696525 83696600 -82953696 + ID4 SINE ID 4 83 0 3 1223 996 284 41 41 chrX 83696600 83696796 -82953500 + MER119 DNA MER1_type 377 572 -11 3 1223 235 213 0 0 chrX 83697150 83697197 -82953099 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 3 1223 303 344 0 0 chrX 83697212 83697308 -82952988 + PB1D10 SINE Alu 13 108 -9 3 1223 444 37 0 0 chrX 83697694 83697748 -82952548 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 1223 597 309 62 65 chrX 83697748 83698104 -82952192 - Lx8 LINE L1 -363 7110 6756 3 1223 229 307 39 16 chrX 83698299 83698428 -82951868 - L1_Mur3 LINE L1 -2019 3861 3730 3 1223 591 281 64 20 chrX 83698443 83698646 -82951650 - B3 SINE B2 -4 212 1 3 1223 641 278 95 0 chrX 83698738 83698907 -82951389 - B3 SINE B2 -5 211 27 3 1223 7059 133 3 5 chrX 83698907 83700569 -82949727 - Lx LINE L1 -8 6646 4990 3 1223 409 156 0 38 chrX 83700581 83700661 -82949635 - Lx LINE L1 -643 6011 5935 3 1223 2972 142 24 12 chrX 83700658 83700700 -82949596 + L1_Mur1 LINE L1 3452 3490 -2396 3 1223 525 32 0 0 chrX 83700700 83700763 -82949533 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 3 1223 2972 142 24 12 chrX 83700763 83701298 -82948998 + L1_Mur1 LINE L1 3491 4036 -1850 3 1223 776 134 53 7 chrX 83701298 83701448 -82948848 - Lx LINE L1 -2 6652 6496 3 1223 987 104 0 0 chrX 83701699 83701901 -82948395 + (CA)n Simple_repeat Simple_repeat 1 202 0 3 1223 261 0 0 0 chrX 83701901 83701929 -82948367 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 1223 25 0 0 0 chrX 83701951 83701976 -82948320 + AT_rich Low_complexity Low_complexity 1 25 0 3 1223 215 246 69 42 chrX 83702302 83702374 -82947922 - PB1D10 SINE Alu -6 111 38 3 1223 383 0 21 0 chrX 83702384 83702431 -82947865 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1223 235 245 0 20 chrX 83702475 83702525 -82947771 - RSINE1 SINE B4 -114 51 3 3 1223 460 274 105 0 chrX 83703321 83703445 -82946851 - B1F SINE Alu -1 148 12 3 1223 216 200 0 0 chrX 83703504 83703559 -82946737 + T-rich Low_complexity Low_complexity 2 56 0 3 1223 1183 55 7 0 chrX 83703572 83703718 -82946578 - B1_Mus1 SINE Alu 0 148 2 3 1223 605 289 35 7 chrX 83705469 83705676 -82944620 - B3A SINE B2 -2 214 1 3 1223 23 33 0 0 chrX 83705679 83705709 -82944587 + AT_rich Low_complexity Low_complexity 1 30 0 3 1223 243 371 41 1 chrX 83706115 83706280 -82944016 - MIR SINE MIR -66 202 29 3 1223 230 346 186 31 chrX 83706307 83706468 -82943828 - MIRc SINE MIR -45 223 38 3 1223 320 234 0 0 chrX 83706624 83706688 -82943608 + B1F1 SINE Alu 83 146 -3 3 1223 414 155 0 0 chrX 83706703 83706800 -82943496 + GA-rich Low_complexity Low_complexity 2 98 0 3 1223 10072 25 0 0 chrX 83706845 83708752 -82941544 - L1Md_T LINE L1 0 6582 4676 3 1223 5402 109 14 10 chrX 83709211 83710005 -82940291 - Lx3A LINE L1 -10 6971 6175 3 1223 615 142 20 47 chrX 83711051 83711079 -82939217 + Lx9 LINE L1 7488 7509 -135 3 1223 183 80 0 0 chrX 83711079 83711104 -82939192 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1223 615 142 20 47 chrX 83711104 83711223 -82939073 + Lx9 LINE L1 7510 7631 -13 3 1223 637 264 14 0 chrX 83711226 83711366 -82938930 - B1_Mur2 SINE Alu -7 142 1 3 1223 22 56 0 0 chrX 83711381 83711417 -82938879 + AT_rich Low_complexity Low_complexity 1 36 0 3 1223 1814 226 59 3 chrX 83711993 83712383 -82937913 + MTC LTR MaLR 2 413 -8 3 1223 180 0 0 0 chrX 83712487 83712507 -82937789 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 1223 313 243 64 18 chrX 83712510 83712619 -82937677 - Lx9 LINE L1 -171 7473 7360 3 1223 886 207 27 0 chrX 83712692 83712880 -82937416 + Lx4B LINE L1 6861 7053 -5 3 1223 705 277 145 61 chrX 83712942 83713310 -82936986 + MTD LTR MaLR 2 419 0 3 1223 473 151 16 16 chrX 83713604 83713725 -82936571 + (CA)n Simple_repeat Simple_repeat 1 121 0 3 1223 369 21 0 94 chrX 83713725 83713778 -82936518 + HAL1-3A_ME LINE L1 1976 2023 -835 3 1223 30 67 0 13 chrX 83714616 83714634 -82935662 + AT_rich Low_complexity Low_complexity 1 18 0 3 1223 5688 106 22 17 chrX 83714634 83715521 -82934775 - Lx3B LINE L1 -3 6970 6079 3 1223 30 67 0 13 chrX 83715521 83715578 -82934718 + AT_rich Low_complexity Low_complexity 1 57 0 3 1223 7269 121 21 31 chrX 83715895 83716651 -82933645 - RLTR21 LTR ERVK -445 1127 441 3 1223 1108 52 0 0 chrX 83716651 83716787 -82933509 + B1_Mus2 SINE Alu 1 136 -11 3 1223 7269 108 18 31 chrX 83716787 83717224 -82933072 - RLTR21 LTR ERVK -1132 440 1 3 1223 1029 240 184 65 chrX 83717544 83717941 -82932355 + RLTR20C LTR ERVK 47 490 -44 3 1223 516 32 0 0 chrX 83718397 83718459 -82931837 + (TA)n Simple_repeat Simple_repeat 1 62 0 3 1223 22 56 0 0 chrX 83718551 83718587 -82931709 + AT_rich Low_complexity Low_complexity 1 36 0 3 1223 1480 264 57 39 chrX 83719082 83719171 -82931125 + Lx6 LINE L1 6793 6881 -579 3 1223 576 0 0 0 chrX 83719171 83719235 -82931061 + (GA)n Simple_repeat Simple_repeat 1 64 0 3 1223 1480 264 57 39 chrX 83719235 83719582 -82930714 + Lx6 LINE L1 6882 7237 -223 3 1223 2461 228 37 40 chrX 83719605 83720203 -82930093 - RLTR18 LTR ERVK -3 613 18 3 1223 237 65 0 0 chrX 83720222 83720253 -82930043 + (TTATA)n Simple_repeat Simple_repeat 4 34 0 3 1223 309 274 77 0 chrX 83720253 83720370 -82929926 + Lx6 LINE L1 7302 7427 -33 3 1223 7051 83 22 11 chrX 83720498 83721119 -82929177 - L1_Mus3 LINE L1 0 6638 6006 3 1223 3107 41 2 40 chrX 83721119 83721522 -82928774 - RLTR10 LTR ERVK -2 388 1 3 1223 7051 117 19 5 chrX 83721522 83722511 -82927785 - L1_Mus3 LINE L1 -633 6005 5008 3 1223 7760 108 11 59 chrX 83722513 83723809 -82926487 + Lx3B LINE L1 5738 6970 -3 3 1223 1956 94 0 25 chrX 83724302 83724617 -82925679 - L1Md_F2 LINE L1 -1 6581 6275 3 1223 3587 38 0 2 chrX 83724613 83725065 -82925231 + L1Md_F2 LINE L1 5807 6257 -325 3 1223 1495 209 52 12 chrX 83725065 83725402 -82924894 + ORR1D1 LTR MaLR 53 393 -1 3 1223 253 338 0 36 chrX 83725575 83725658 -82924638 - B1F SINE Alu -68 81 2 3 1223 312 282 179 0 chrX 83725760 83725877 -82924419 + B4A SINE B4 2 139 -153 3 1223 212 149 21 0 chrX 83725881 83725928 -82924368 + GA-rich Low_complexity Low_complexity 2 49 0 3 1223 198 91 0 0 chrX 83726037 83726070 -82924226 + (T)n Simple_repeat Simple_repeat 1 33 0 3 1223 488 93 0 13 chrX 83726190 83726266 -82924030 + (TG)n Simple_repeat Simple_repeat 2 76 0 3 1223 667 319 51 48 chrX 83726293 83726566 -82923730 - B4A SINE B4 -18 274 1 3 1223 203 0 37 0 chrX 83726661 83726688 -82923608 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 3 1223 630 335 7 0 chrX 83727664 83727816 -82922480 + B3A SINE B2 2 154 -44 3 1223 583 13 26 0 chrX 83727816 83727892 -82922404 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 1223 594 41 0 0 chrX 83727892 83727964 -82922332 + (GA)n Simple_repeat Simple_repeat 2 74 0 3 1223 275 265 182 73 chrX 83727991 83728101 -82922195 + B1_Mm SINE Alu 8 129 -20 3 1223 424 328 51 11 chrX 83728142 83728318 -82921978 - MER58A DNA MER1_type 0 224 42 3 1223 492 213 282 6 chrX 83728361 83728517 -82921779 + MER3 DNA MER1_type 5 203 -6 3 1223 933 308 28 55 chrX 83729524 83729813 -82920483 + B4A SINE B4 6 286 -6 3 1223 36 40 0 0 chrX 83730095 83730145 -82920151 + AT_rich Low_complexity Low_complexity 1 50 0 3 1223 878 259 14 23 chrX 83730145 83730362 -82919934 - B3 SINE B2 0 216 2 3 1223 333 0 0 0 chrX 83730465 83730502 -82919794 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1223 459 0 0 0 chrX 83730502 83730553 -82919743 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 1223 298 234 8 6 chrX 83730584 83730746 -82919550 - L1M3 LINE L1 -700 5484 5323 3 1223 342 0 0 0 chrX 83730812 83730850 -82919446 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 1223 206 227 0 0 chrX 83731019 83731063 -82919233 + (CAA)n Simple_repeat Simple_repeat 1 44 0 3 1223 366 323 34 64 chrX 83731751 83732016 -82918280 + L1MB3 LINE L1 5918 6174 -9 3 1223 272 273 0 13 chrX 83732133 83732211 -82918085 - PB1D10 SINE Alu 0 117 41 3 1223 227 241 18 36 chrX 83732977 83733033 -82917263 - ID4_ SINE ID -24 59 5 3 1223 438 79 0 0 chrX 83733090 83733153 -82917143 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1223 258 105 0 0 chrX 83733525 83733563 -82916733 + (CAAG)n Simple_repeat Simple_repeat 2 39 0 3 1223 386 224 108 6 chrX 83734497 83734544 -82915752 + L1MA6 LINE L1 6126 6180 -120 3 1223 215 61 0 29 chrX 83734544 83734578 -82915718 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 3 1223 386 224 108 6 chrX 83734578 83734687 -82915609 + L1MA6 LINE L1 6181 6297 -3 3 1223 338 301 26 16 chrX 83734776 83734890 -82915406 + B1F2 SINE Alu 3 110 -7 3 1223 440 340 58 7 chrX 83735174 83735328 -82914968 - MER58A DNA MER1_type -62 162 1 3 1223 482 339 22 24 chrX 83735767 83735968 -82914328 - B3A SINE B2 0 216 12 3 1223 740 111 8 0 chrX 83735978 83736095 -82914201 + (TTCC)n Simple_repeat Simple_repeat 3 120 0 3 1223 714 235 0 7 chrX 83736113 83736263 -82914033 - B1_Mur2 SINE Alu 0 149 1 3 1223 439 252 157 0 chrX 83737837 83737984 -82912312 - MTEa LTR MaLR -13 366 197 3 1223 3620 212 37 20 chrX 83737985 83739559 -82910737 - Lx5 LINE L1 -305 7155 5305 3 1223 1953 41 0 0 chrX 83739562 83739796 -82910500 + L1_Mm LINE L1 5353 5586 -297 4 1223 8258 33 2 1 chrX 83739796 83740779 -82909517 + L1Md_F3 LINE L1 5587 6570 -14 4 1223 2200 202 85 10 chrX 83740780 83741370 -82908926 - Lx5 LINE L1 -562 5315 4682 3 1223 689 281 48 37 chrX 83741676 83741949 -82908347 - RLTR15 LTR ERVK -83 276 1 4 1223 338 287 9 0 chrX 83741949 83742064 -82908232 - Lx9 LINE L1 -221 7423 7308 4 1223 3277 188 55 7 chrX 83742114 83742801 -82907495 - RMER6D LTR ERVK 0 720 1 4 1223 277 264 5 159 chrX 83742835 83742963 -82907333 - Lx9 LINE L1 -500 7144 7035 4 1223 3828 184 127 13 chrX 83742963 83743735 -82906561 - RMER13A LTR ERVK 0 860 1 4 1223 277 264 5 159 chrX 83743735 83743795 -82906501 - Lx9 LINE L1 -610 7034 6985 4 1223 633 122 127 24 chrX 83743788 83743944 -82906352 - L1_Mus3 LINE L1 -7 6631 6437 4 1223 580 271 16 27 chrX 83743950 83744136 -82906160 - Lx9 LINE L1 -644 7000 6817 4 1223 201 257 144 75 chrX 83744210 83744370 -82905926 - MIRc SINE MIR -3 265 95 4 1223 252 0 0 0 chrX 83744431 83744459 -82905837 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 4 1223 4065 90 26 2 chrX 83744469 83745036 -82905260 + L1_Mus3 LINE L1 6054 6634 -4 4 1223 732 343 59 88 chrX 83745065 83745589 -82904707 - MLT2B2 LTR ERVL -4 511 3 4 1223 201 74 0 0 chrX 83747645 83747672 -82902624 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1223 205 167 0 0 chrX 83748700 83748736 -82901560 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1223 1100 72 0 0 chrX 83748778 83748916 -82901380 + B1_Mus2 SINE Alu 1 138 -9 4 1223 709 213 0 22 chrX 83749120 83749259 -82901037 + B1_Mur2 SINE Alu 13 148 -1 4 1223 537 285 108 23 chrX 83749262 83749438 -82900858 + B3A SINE B2 5 195 -21 4 1223 582 15 0 0 chrX 83749439 83749506 -82900790 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 1223 233 308 45 21 chrX 83749578 83749716 -82900580 - MIRc SINE MIR -60 208 61 4 1223 7515 50 5 0 chrX 83749750 83751085 -82899211 - L1Md_F2 LINE L1 -2 6580 5237 4 1223 215 286 48 67 chrX 83751138 83751171 -82899125 + BC1_Mm scRNA scRNA 4 39 -113 4 1223 387 0 0 0 chrX 83751171 83751214 -82899082 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1223 228 219 59 59 chrX 83751214 83751248 -82899048 + ID SINE ID 41 70 -154 4 1223 215 286 48 67 chrX 83751248 83751285 -82899011 + BC1_Mm scRNA scRNA 40 106 -46 4 1223 529 289 59 7 chrX 83752220 83752373 -82897923 + B3 SINE B2 50 210 -6 4 1223 887 114 0 0 chrX 83752399 83752530 -82897766 + ORR1B2 LTR MaLR 3 133 -261 4 1223 4141 100 11 10 chrX 83752547 83753165 -82897131 - L1_Mus3 LINE L1 0 6638 6020 4 1223 2555 103 0 70 chrX 83753167 83753505 -82896791 + L1_Mus3 LINE L1 5477 5789 -94 4 1223 1699 50 5 0 chrX 83753505 83753725 -82896571 + L1_Mus2 LINE L1 6346 6566 0 4 1223 2555 87 0 71 chrX 83753725 83753918 -82896378 + L1_Mus3 LINE L1 5789 5978 -660 4 1223 1485 210 4 11 chrX 83753918 83754192 -82896104 + ORR1B2 LTR MaLR 96 367 0 4 1223 658 233 84 17 chrX 83754318 83754497 -82895799 + MTD LTR MaLR 1 191 -228 4 1223 262 300 83 48 chrX 83754496 83754580 -82895716 + B3A SINE B2 87 173 -25 4 1223 873 116 0 0 chrX 83754593 83754739 -82895557 + (CA)n Simple_repeat Simple_repeat 2 147 0 4 1223 22 35 0 0 chrX 83754745 83754774 -82895522 + AT_rich Low_complexity Low_complexity 1 29 0 4 1223 29 28 0 0 chrX 83754908 83754944 -82895352 + AT_rich Low_complexity Low_complexity 1 36 0 4 1224 481 297 97 0 chrX 83755414 83755569 -82894727 + LTR33C LTR ERVL 1 170 -459 4 1224 259 230 71 26 chrX 83755810 83755898 -82894398 - MIRb SINE MIR 0 262 168 4 1224 1149 111 27 16 chrX 83756335 83756518 -82893778 - B2_Mm2 SINE B2 -9 186 2 4 1224 692 300 0 12 chrX 83756555 83756710 -82893586 + B3A SINE B2 1 153 -45 4 1224 357 109 0 0 chrX 83756710 83756765 -82893531 + (CATA)n Simple_repeat Simple_repeat 4 58 0 4 1224 445 239 65 7 chrX 83756805 83756944 -82893352 + Lx3_Mus LINE L1 211 357 -6627 4 1224 29145 100 33 10 chrX 83756913 83759846 -82890450 + Lx3_Mus LINE L1 715 3743 -2143 4 1224 3282 28 0 13 chrX 83759846 83760243 -82890053 + L1Md_F3 LINE L1 6193 6584 0 4 1224 29145 107 24 16 chrX 83760243 83763510 -82886786 + Lx3_Mus LINE L1 3744 7001 -8 4 1224 441 345 69 101 chrX 83763886 83763985 -82886311 + MLT1A1 LTR MaLR 13 103 -305 4 1224 515 40 13 0 chrX 83763985 83764061 -82886235 + Lx2 LINE L1 6921 6997 0 4 1224 441 345 69 101 chrX 83764061 83764282 -82886014 + MLT1A1 LTR MaLR 104 343 -65 4 1224 1138 92 6 6 chrX 83764282 83764457 -82885839 + (TTC)n Simple_repeat Simple_repeat 3 177 0 4 1224 441 345 69 101 chrX 83764457 83764541 -82885755 + MLT1A1 LTR MaLR 344 405 -3 4 1224 201 350 138 0 chrX 83764650 83764773 -82885523 + MIRb SINE MIR 7 146 -122 4 1224 763 268 71 0 chrX 83765008 83765206 -82885090 + B3 SINE B2 1 212 -4 4 1224 305 323 90 60 chrX 83765329 83765530 -82884766 - ORR1E LTR MaLR -105 254 48 4 1224 19981 83 9 13 chrX 83766911 83769491 -82880805 + L1ME3 LINE L1 416 2977 -2906 4 1224 3053 62 0 0 chrX 83769491 83769879 -82880417 - L1Md_T LINE L1 0 6582 6195 4 1224 19981 54 7 6 chrX 83769879 83770873 -82879423 + L1ME3 LINE L1 2978 3978 -1905 4 1224 4435 78 0 122 chrX 83770873 83771675 -82878621 + L1ME3 LINE L1 4884 5625 -537 4 1224 8045 44 14 0 chrX 83771675 83772657 -82877639 + L1Md_F3 LINE L1 5588 6583 -1 4 1224 848 275 119 9 chrX 83772657 83772837 -82877459 + L1ME3 LINE L1 5626 5841 -321 4 1224 246 62 0 0 chrX 83773043 83773075 -82877221 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1224 574 317 61 65 chrX 83773089 83773366 -82876930 - B4A SINE B4 -16 276 1 4 1224 307 248 128 10 chrX 83773371 83773473 -82876823 + L1ME3 LINE L1 6046 6159 -14 4 1224 21 0 0 0 chrX 83774276 83774297 -82875999 + AT_rich Low_complexity Low_complexity 1 21 0 4 1224 198 0 0 0 chrX 83774356 83774378 -82875918 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1224 718 158 0 0 chrX 83774604 83774718 -82875578 + ORR1A2 LTR MaLR 152 265 -62 4 1224 3816 112 8 2 chrX 83774726 83775370 -82874926 - IAPEY3-int LTR ERVK -42 7638 6965 4 1224 1359 113 109 0 chrX 83775370 83775600 -82874696 - IAP-d-int LTR ERVK -1287 5255 5001 4 1224 306 313 32 32 chrX 83775602 83775820 -82874476 - IAPEY3-int LTR ERVK -6017 1564 1347 4 1224 2103 39 134 3 chrX 83775817 83776123 -82874173 - IAPEY3-int LTR ERVK -1076 911 566 4 1224 478 115 44 37 chrX 83776123 83776258 -82874038 + CT-rich Low_complexity Low_complexity 3 138 0 4 1224 363 23 0 0 chrX 83776347 83776390 -82873906 - IAPEY3-int LTR ERVK -7314 267 225 4 1224 261 264 0 0 chrX 83776390 83776443 -82873853 - RLTR27 LTR ERVK -34 275 223 4 1224 1200 71 24 6 chrX 83776443 83776612 -82873684 - IAPEY3-int LTR ERVK -7409 172 1 4 1224 2643 60 2 119 chrX 83776612 83777025 -82873271 - RLTR10B2 LTR ERVK 0 365 1 4 1224 1482 145 132 17 chrX 83777034 83777322 -82872974 - L1_Mur2 LINE L1 -65 5812 5492 4 1224 782 307 94 74 chrX 83777322 83777965 -82872331 + RMER13A LTR ERVK 1 696 -212 4 1224 1082 120 175 0 chrX 83778094 83778294 -82872002 - L1_Mur2 LINE L1 -385 5492 5258 4 1224 581 244 184 52 chrX 83778294 83778527 -82871769 - RLTR10A LTR ERVK 0 411 148 4 1224 1774 214 14 29 chrX 83778572 83779060 -82871236 - RLTR45-int LTR ERVK -202 7042 6590 4 1224 1526 327 58 58 chrX 83779165 83781014 -82869282 - RLTR45-int LTR ERVK -1462 5080 3268 4 1224 301 281 46 46 chrX 83781061 83781214 -82869082 - RLTR45-int LTR ERVK -4149 2393 2241 4 1224 403 194 61 53 chrX 83781436 83781550 -82868746 - RLTR10-int LTR ERVK -1554 433 319 4 1224 581 236 179 53 chrX 83781567 83781813 -82868483 - RLTR10A LTR ERVK 0 411 135 4 1224 3337 171 14 11 chrX 83781858 83782480 -82867816 - L1_Mur2 LINE L1 -614 5263 4640 4 1224 1127 61 0 0 chrX 83782494 83782642 -82867654 - L1_Mus2 LINE L1 0 6566 6419 4 1224 944 237 159 18 chrX 83782647 83782930 -82867366 - Lx8 LINE L1 -7 7466 7144 4 1224 271 246 15 15 chrX 83783025 83783091 -82867205 - MTD LTR MaLR 0 419 354 4 1224 2294 79 0 0 chrX 83783126 83783429 -82866867 - L1_Mus1 LINE L1 0 6567 6265 4 1224 1360 270 0 17 chrX 83783449 83783750 -82866546 - MTD LTR MaLR -78 341 46 4 1224 494 16 16 0 chrX 83783761 83783824 -82866472 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 4 1224 26 30 0 0 chrX 83784043 83784076 -82866220 + AT_rich Low_complexity Low_complexity 1 33 0 4 1224 519 60 0 0 chrX 83784178 83784245 -82866051 + (TTTC)n Simple_repeat Simple_repeat 4 70 0 4 1224 207 93 67 44 chrX 83784252 83784297 -82865999 + A-rich Low_complexity Low_complexity 5 50 0 4 1224 408 20 0 0 chrX 83784300 83784349 -82865947 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1224 1849 286 88 18 chrX 83784366 83784967 -82865329 - Lx7 LINE L1 -393 7303 6661 4 1224 10737 20 0 0 chrX 83785242 83786485 -82863811 + L1Md_A LINE L1 4344 5586 -297 4 1224 8317 36 1 0 chrX 83786485 83787480 -82862816 + L1Md_A LINE L1 5587 6582 0 4 1224 1163 62 0 0 chrX 83787514 83787658 -82862638 + B1_Mm SINE Alu 2 145 -2 4 1224 2126 139 9 9 chrX 83787731 83788058 -82862238 - ORR1A2 LTR MaLR 0 327 1 4 1224 695 176 8 0 chrX 83789077 83789208 -82861088 - L1_Mur2 LINE L1 -1352 4525 4394 4 1224 2574 225 95 10 chrX 83789213 83790154 -82860142 + Lx4B LINE L1 5892 6946 -27 4 1224 5259 220 102 42 chrX 83790494 83790987 -82859309 + Lx9 LINE L1 6044 6550 -1094 4 1224 576 0 0 0 chrX 83790987 83791051 -82859245 + (TA)n Simple_repeat Simple_repeat 2 65 0 4 1224 5259 220 102 42 chrX 83791051 83791137 -82859159 + Lx9 LINE L1 6551 6631 -1013 4 1224 205 51 25 25 chrX 83791137 83791177 -82859119 + (CAAA)n Simple_repeat Simple_repeat 3 42 0 4 1224 5259 220 102 42 chrX 83791177 83792098 -82858198 + Lx9 LINE L1 6632 7634 -10 4 1224 230 306 152 10 chrX 83792337 83792436 -82857860 + PB1D9 SINE Alu 7 119 -1 4 1224 321 89 0 0 chrX 83792436 83792481 -82857815 + (CAAAG)n Simple_repeat Simple_repeat 5 49 0 4 1224 5115 130 29 1 chrX 83793338 83794134 -82856162 - Lx LINE L1 -1 6653 5836 4 1224 1653 36 0 0 chrX 83794137 83794330 -82855966 - B2_Mm1t SINE B2 0 193 1 4 1224 7059 73 32 6 chrX 83794348 83795604 -82854692 - L1_Mus2 LINE L1 0 6566 5275 4 1224 288 319 66 30 chrX 83796735 83796932 -82853364 - L1M5 LINE L1 -350 5823 5620 4 1224 792 32 0 0 chrX 83797050 83797145 -82853151 + (TA)n Simple_repeat Simple_repeat 1 95 0 4 1224 455 320 78 7 chrX 83799389 83799543 -82850753 + B4A SINE B4 4 168 -124 4 1224 719 330 43 4 chrX 83799807 83800087 -82850209 - B4A SINE B4 0 292 2 4 1224 276 77 0 0 chrX 83800991 83801030 -82849266 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1224 5864 57 0 4 chrX 83801377 83802114 -82848182 - L1Md_F2 LINE L1 -15 6567 5834 4 1224 378 0 0 0 chrX 83802273 83802315 -82847981 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1224 276 279 5 69 chrX 83802530 83802746 -82847550 - RMER17C LTR ERVK -157 253 52 4 1224 1628 31 0 5 chrX 83802749 83802942 -82847354 + L1Md_F2 LINE L1 5394 5585 -298 4 1224 7631 67 6 8 chrX 83802943 83803941 -82846355 + L1Md_F2 LINE L1 5587 6582 0 4 1224 2903 98 0 30 chrX 83803960 83804401 -82845895 + L1Md_F2 LINE L1 6151 6578 -4 4 1224 739 256 80 25 chrX 83804910 83805110 -82845186 - MER58C DNA MER1_type -3 212 2 4 1224 630 0 0 0 chrX 83805468 83805538 -82844758 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 4 1224 335 89 18 0 chrX 83806645 83806701 -82843595 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 1224 1190 166 71 0 chrX 83807048 83807259 -82843037 - URR1A DNA MER1_type 0 226 1 4 1224 343 164 0 0 chrX 83807793 83807848 -82842448 - ORR1C2 LTR MaLR 0 384 330 4 1224 335 82 0 16 chrX 83807916 83807978 -82842318 - L1Md_F2 LINE L1 -2 6580 6520 5 1224 1410 207 50 56 chrX 83807979 83808317 -82841979 - ORR1C2 LTR MaLR -47 337 2 4 1224 298 342 108 48 chrX 83808580 83808746 -82841550 - MLT1G LTR MaLR -216 375 200 5 1224 495 0 0 0 chrX 83808944 83808999 -82841297 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1224 314 227 69 8 chrX 83809061 83809188 -82841108 + L1M5 LINE L1 5377 5511 -933 5 1224 4192 172 73 54 chrX 83809237 83810122 -82840174 + RMER19B LTR ERVK 1 902 0 5 1224 250 254 14 27 chrX 83810201 83810274 -82840022 + L1M5 LINE L1 5813 5884 -356 5 1224 29 47 0 0 chrX 83810317 83810360 -82839936 + AT_rich Low_complexity Low_complexity 1 43 0 5 1224 274 358 0 0 chrX 83810529 83810624 -82839672 - L1M7 LINE L1 -5750 468 374 5 1224 405 0 0 0 chrX 83811404 83811449 -82838847 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1224 274 349 108 20 chrX 83811597 83811755 -82838541 + MIR SINE MIR 3 176 -92 5 1224 587 351 40 43 chrX 83811924 83811958 -82838338 - LTR40a LTR ERVL -13 506 472 5 1224 1622 228 46 83 chrX 83811958 83812159 -82838137 + MTC LTR MaLR 1 209 -212 5 1224 1091 57 43 0 chrX 83812159 83812300 -82837996 + B1_Mus2 SINE Alu 1 147 0 5 1224 1622 228 46 83 chrX 83812300 83812330 -82837966 + MTC LTR MaLR 210 210 -211 5 1224 681 95 0 0 chrX 83812330 83812446 -82837850 + (GAAA)n Simple_repeat Simple_repeat 2 117 0 5 1224 1622 228 46 83 chrX 83812446 83812648 -82837648 + MTC LTR MaLR 210 419 -2 5 1224 587 351 40 43 chrX 83812648 83812890 -82837406 - LTR40a LTR ERVL -48 471 232 5 1224 265 357 78 7 chrX 83813010 83813151 -82837145 - LTR40a LTR ERVL -309 153 3 5 1224 286 256 37 49 chrX 83813351 83813433 -82836863 + ID4_ SINE ID 9 89 -63 5 1224 250 367 42 28 chrX 83813454 83813667 -82836629 - L1M5 LINE L1 -311 5862 5647 5 1224 620 358 14 0 chrX 83813729 83813936 -82836360 + MLT1A0 LTR MaLR 156 365 0 5 1224 258 305 143 8 chrX 83815274 83815393 -82834903 + MER5A1 DNA MER1_type 30 164 -2 5 1224 7853 64 0 0 chrX 83816543 83817660 -82832636 - L1Md_F2 LINE L1 -9 6573 5457 5 1224 1220 101 11 11 chrX 83817782 83817962 -82832334 - B2_Mm2 SINE B2 -14 181 2 5 1224 283 276 53 38 chrX 83818142 83818274 -82832022 + HAL1 LINE L1 97 230 -2277 5 1224 2586 212 23 16 chrX 83818408 83818920 -82831376 + Lx5 LINE L1 6468 6983 -67 5 1224 354 45 0 0 chrX 83818936 83818980 -82831316 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 5 1224 390 318 177 46 chrX 83819201 83819573 -82830723 - L2a LINE L2 -81 3345 2925 5 1224 4746 35 5 2 chrX 83819574 83820146 -82830150 + L1Md_F3 LINE L1 6011 6584 0 5 1224 348 375 131 33 chrX 83820209 83820722 -82829574 + L2 LINE L2 2518 3080 -339 5 1224 1315 241 22 0 chrX 83820913 83821191 -82829105 + MT2A LTR ERVL 1 284 -249 5 1224 41145 5 0 0 chrX 83822345 83828712 -82821584 - L1Md_A LINE L1 -1 6581 214 5 1224 319 270 99 26 chrX 83829001 83829153 -82821143 - L1M5 LINE L1 -2001 4145 3983 5 1224 21 36 0 0 chrX 83829154 83829182 -82821114 + AT_rich Low_complexity Low_complexity 1 28 0 5 1224 27 62 0 0 chrX 83829242 83829290 -82821006 + AT_rich Low_complexity Low_complexity 1 48 0 5 1224 25843 83 6 13 chrX 83829391 83834676 -82815620 + L1Md_F2 LINE L1 380 5586 -297 5 1224 7194 71 13 3 chrX 83834677 83835648 -82814648 + L1Md_F2 LINE L1 5588 6568 -14 5 1224 807 237 62 21 chrX 83835680 83835874 -82814422 + B3 SINE B2 9 210 -6 5 1224 742 227 17 0 chrX 83835899 83836071 -82814225 + RLTR15 LTR ERVK 8 182 -177 5 1224 415 241 113 33 chrX 83836529 83836679 -82813617 - MER5A1 DNA MER1_type 0 166 5 5 1224 367 351 80 40 chrX 83837125 83837300 -82812996 + B4A SINE B4 9 190 -102 5 1224 1097 274 139 49 chrX 83837658 83838246 -82812050 + MER67C LTR ERV1 71 711 0 5 1224 5514 131 47 7 chrX 83838439 83839311 -82810985 + Lx2 LINE L1 5973 6866 -131 5 1224 245 27 0 51 chrX 83839311 83839350 -82810946 + (TGGG)n Simple_repeat Simple_repeat 1 37 0 5 1224 5514 131 47 7 chrX 83839350 83839429 -82810867 + Lx2 LINE L1 6867 6960 -37 5 1224 585 0 0 0 chrX 83839462 83839527 -82810769 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 5 1224 520 266 28 7 chrX 83840316 83840460 -82809836 - B1F SINE Alu 0 149 3 5 1224 335 245 108 31 chrX 83841110 83841263 -82809033 + MIRb SINE MIR 93 262 0 5 1224 23 0 0 0 chrX 83841526 83841549 -82808747 + AT_rich Low_complexity Low_complexity 1 23 0 5 1224 684 200 0 0 chrX 83841952 83842072 -82808224 + MTC LTR MaLR 1 120 -301 5 1224 413 284 49 73 chrX 83842057 83842094 -82808202 - B4A SINE B4 -38 254 219 5 1224 1032 73 0 0 chrX 83842094 83842245 -82808051 + (TTCC)n Simple_repeat Simple_repeat 3 153 0 5 1224 805 109 8 0 chrX 83842245 83842364 -82807932 - B1_Mur3 SINE Alu -9 140 21 5 1224 1701 188 27 39 chrX 83842337 83842675 -82807621 + MTC LTR MaLR 74 407 -14 5 1224 413 284 49 73 chrX 83842364 83842412 -82807884 - B4A SINE B4 -74 218 55 5 1224 3968 64 14 28 chrX 83842762 83843349 -82806947 + L1Md_F2 LINE L1 6004 6582 0 5 1224 300 314 62 6 chrX 83843373 83843533 -82806763 + L1M2 LINE L1 5302 5470 -830 5 1224 753 254 81 63 chrX 83843616 83843948 -82806348 + RMER10A LTR ERVL 87 424 -18 5 1224 3520 53 0 5 chrX 83845295 83845731 -82804565 + L1Md_F2 LINE L1 6137 6570 -12 5 1224 657 168 94 7 chrX 83845739 83845877 -82804419 + B1_Mur4 SINE Alu 1 150 0 5 1224 185 35 69 0 chrX 83845877 83845906 -82804390 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 5 1224 900 162 0 0 chrX 83845919 83846061 -82804235 + B1_Mus1 SINE Alu 1 142 -6 5 1224 198 0 0 0 chrX 83846069 83846091 -82804205 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 5 1224 1174 89 0 22 chrX 83846099 83846283 -82804013 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 1224 498 108 0 0 chrX 83846286 83846360 -82803936 + (GA)n Simple_repeat Simple_repeat 2 75 0 5 1224 294 182 91 0 chrX 83846364 83846430 -82803866 + RLTR19-int LTR ERVK 1531 1602 -3920 5 1224 257 263 29 57 chrX 83846433 83846538 -82803758 + RLTR19-int LTR ERVK 1566 1667 -3855 5 1224 282 236 45 38 chrX 83847145 83847277 -82803019 + RLTR19-int LTR ERVK 2330 2462 -3675 5 1224 664 107 10 0 chrX 83847277 83847380 -82802916 + L1_Mm LINE L1 3863 3966 -1917 5 1224 349 41 0 0 chrX 83847380 83847429 -82802867 + L1_Mus3 LINE L1 6576 6624 -14 5 1224 379 262 7 67 chrX 83847477 83847612 -82802684 + RLTR19-int LTR ERVK 2475 2601 -3536 5 1224 324 185 0 58 chrX 83847612 83847681 -82802615 - RMER20B LTR ERVK -1 626 562 5 1224 1701 205 79 70 chrX 83847661 83848091 -82802205 - RMER20B LTR ERVK -193 434 1 5 1224 363 217 52 121 chrX 83848379 83848552 -82801744 + RLTR19-int LTR ERVK 2861 3021 -3116 5 1224 1789 169 84 9 chrX 83848988 83849271 -82801025 - ORR1B2 LTR MaLR -8 359 64 5 1224 2669 127 7 60 chrX 83849271 83849724 -82800572 + RLTR23 LTR ERV1 2 430 0 5 1224 1789 169 84 9 chrX 83849724 83849774 -82800522 - ORR1B2 LTR MaLR -304 63 2 5 1224 701 208 28 143 chrX 83849789 83850075 -82800221 + RLTR19-int LTR ERVK 3529 3781 -2356 5 1224 639 0 0 0 chrX 83850246 83850317 -82799979 + (TC)n Simple_repeat Simple_repeat 1 71 0 5 1224 260 133 0 0 chrX 83850390 83850435 -82799861 + RLTR19-int LTR ERVK 4036 4080 -2057 5 1224 1232 203 9 33 chrX 83850554 83850842 -82799454 + ORR1B1 LTR MaLR 1 277 -107 5 1224 490 238 36 153 chrX 83850978 83851286 -82799010 + RMER10A LTR ERVL 127 398 -44 5 1224 2759 101 89 20 chrX 83851322 83851818 -82798478 - RLTR47_MM LTR ERV1 -2 530 1 5 1224 4426 109 7 19 chrX 83852328 83853053 -82797243 - L1Md_F2 LINE L1 0 6582 5916 5 1224 2071 38 19 0 chrX 83853057 83853323 -82796973 + L1Md_F2 LINE L1 5641 5911 -671 5 1224 2158 188 53 7 chrX 83854826 83855244 -82795052 - RMER10A LTR ERVL -5 437 1 5 1224 2921 92 92 2 chrX 83855488 83855976 -82794320 - RLTR47_MM LTR ERV1 0 532 1 5 1224 292 345 35 13 chrX 83856102 83856334 -82793962 - MuRRS4-int LTR ERV1 -161 4902 4666 5 1224 397 283 8 23 chrX 83856515 83856645 -82793651 - MuRRS4-int LTR ERV1 -1403 3660 3533 5 1224 1478 354 24 23 chrX 83857016 83858095 -82792201 - RLTR6-int LTR ERV1 -3154 4452 3373 5 1224 1719 330 67 62 chrX 83858134 83859797 -82790499 - RLTR6-int LTR ERV1 -4532 3246 1562 5 1224 3204 41 3 3 chrX 83859797 83860189 -82790107 - L1Md_T LINE L1 0 6582 6191 5 1224 1719 330 67 62 chrX 83860189 83860474 -82789822 - RLTR6-int LTR ERV1 -6217 1561 1289 5 1224 295 302 84 30 chrX 83860871 83861038 -82789258 - RLTR6-int LTR ERV1 -6889 667 492 5 1224 2127 101 249 0 chrX 83861413 83861839 -82788457 - RLTR47_MM LTR ERV1 0 532 1 5 1224 1037 202 56 27 chrX 83861893 83862228 -82788068 - RMER10A LTR ERVL 0 442 1 5 1224 349 94 0 45 chrX 83862363 83862430 -82787866 - L1Md_T LINE L1 -5 6577 6514 5 1224 588 53 0 0 chrX 83863159 83863235 -82787061 + (GA)n Simple_repeat Simple_repeat 1 76 0 5 1224 2548 133 22 60 chrX 83863719 83864166 -82786130 - RLTR23 LTR ERV1 0 430 1 5 1224 210 37 0 0 chrX 83864281 83864308 -82785988 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1224 243 0 0 0 chrX 83864626 83864653 -82785643 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 5 1224 327 325 19 44 chrX 83867632 83867790 -82782506 - RSINE1 SINE B4 -8 157 4 5 1224 567 153 53 53 chrX 83867825 83868012 -82782284 + RMER17C LTR ERVK 91 277 -133 5 1224 1068 243 0 0 chrX 83868032 83868234 -82782062 - B3 SINE B2 -7 209 8 5 1224 2846 110 7 14 chrX 83868236 83868678 -82781618 - BGLII_B LTR ERVK -2 439 1 5 1224 291 173 0 0 chrX 83868914 83868966 -82781330 + ORR1C2 LTR MaLR 1 52 -332 5 1224 455 314 0 35 chrX 83868988 83869133 -82781163 - RLTR18B LTR ERVK 0 512 373 5 1224 549 256 77 49 chrX 83869133 83869379 -82780917 + Lx6 LINE L1 7205 7457 -3 5 1224 2341 224 6 14 chrX 83869379 83869864 -82780432 - RLTR18 LTR ERVK -135 481 1 5 1224 377 173 44 4 chrX 83869870 83869970 -82780326 + ORR1C2 LTR MaLR 40 127 -247 5 1224 1716 135 46 33 chrX 83869950 83870257 -82780039 - ORR1A4 LTR MaLR -16 313 3 5 1224 734 284 41 41 chrX 83870268 83870297 -82779999 + ORR1C2 LTR MaLR 139 168 -216 5 1224 684 0 0 0 chrX 83870297 83870373 -82779923 + (TC)n Simple_repeat Simple_repeat 1 76 0 5 1224 734 284 41 41 chrX 83870373 83870589 -82779707 + ORR1C2 LTR MaLR 169 383 -1 5 1224 218 273 0 0 chrX 83871184 83871228 -82779068 + ID2 SINE ID 37 80 -3 5 1224 472 332 96 12 chrX 83871623 83871880 -82778416 + MLT1G1 LTR MaLR 301 579 0 5 1224 461 150 12 0 chrX 83873083 83873163 -82777133 + MTC LTR MaLR 1 81 -340 5 1224 412 244 12 0 chrX 83873164 83873246 -82777050 + B1_Mur4 SINE Alu 3 85 -65 5 1224 747 66 20 7 chrX 83873193 83873322 -82776974 - B2_Mm2 SINE B2 -58 135 2 5 1224 938 114 7 10 chrX 83873322 83873480 -82776816 - RLTR19 LTR ERVK -294 202 49 5 1224 381 80 0 0 chrX 83873453 83873503 -82776793 + B1_Mur3 SINE Alu 89 138 -11 5 1224 252 0 0 0 chrX 83873503 83873531 -82776765 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 5 1224 354 121 197 0 chrX 83873557 83873623 -82776673 + MTC LTR MaLR 70 148 -273 5 1224 1483 169 268 53 chrX 83873627 83874032 -82776264 + RMER6C LTR ERVK 3 494 -196 6 1224 2642 187 2 41 chrX 83874032 83874349 -82775947 - RLTR19 LTR ERVK -5 494 196 6 1224 1389 78 22 0 chrX 83874349 83874529 -82775767 - B2_Mm2 SINE B2 -10 185 2 6 1224 2642 187 2 41 chrX 83874529 83874725 -82775571 - RLTR19 LTR ERVK -304 195 1 6 1224 1025 194 58 33 chrX 83874725 83874904 -82775392 + RMER6C LTR ERVK 493 677 -13 6 1224 1467 213 7 4 chrX 83874909 83875178 -82775118 + MTC LTR MaLR 152 421 0 5 1224 332 238 79 63 chrX 83875392 83875602 -82774694 + L1MA9 LINE L1 4776 4961 -1182 6 1224 362 346 66 6 chrX 83875713 83875896 -82774400 + L1MA9 LINE L1 5080 5273 -870 6 1224 5157 107 10 13 chrX 83875913 83876681 -82773615 - Lx LINE L1 -4 6650 5885 6 1224 738 291 73 17 chrX 83876715 83877092 -82773204 + L1MA9 LINE L1 5290 5680 -611 6 1224 369 0 0 0 chrX 83877120 83877161 -82773135 + (TA)n Simple_repeat Simple_repeat 1 41 0 6 1224 285 244 12 0 chrX 83877476 83877558 -82772738 + L1MA9 LINE L1 6201 6283 -29 6 1224 704 205 1 17 chrX 83877566 83877738 -82772558 - ORR1C2 LTR MaLR 0 384 218 6 1224 204 163 23 0 chrX 83877786 83877829 -82772467 + (TA)n Simple_repeat Simple_repeat 1 44 0 6 1224 1169 186 85 38 chrX 83877832 83878151 -82772145 + Lx7 LINE L1 7359 7692 -4 6 1224 619 148 87 0 chrX 83878153 83878268 -82772028 - ORR1C2 LTR MaLR -249 125 1 6 1224 1860 218 143 10 chrX 83878298 83878538 -82771758 + RLTR12A LTR ERVK 1 242 -326 6 1224 873 29 0 0 chrX 83878538 83878642 -82771654 + (GA)n Simple_repeat Simple_repeat 1 104 0 6 1224 1860 218 143 10 chrX 83878642 83878892 -82771404 + RLTR12A LTR ERVK 243 555 -13 6 1224 357 82 0 0 chrX 83878932 83878981 -82771315 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1224 3314 81 0 13 chrX 83879010 83879471 -82770825 - L1Md_F2 LINE L1 -1 6581 6127 6 1224 561 30 0 0 chrX 83879716 83879783 -82770513 + (TC)n Simple_repeat Simple_repeat 2 68 0 6 1224 324 289 96 26 chrX 83880150 83880306 -82769990 + MIRb SINE MIR 49 215 -53 6 1224 7101 91 31 1 chrX 83881211 83882229 -82768067 - Lx LINE L1 -6 6648 5600 6 1224 213 39 0 0 chrX 83882276 83882302 -82767994 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 1224 1059 94 0 0 chrX 83882322 83882460 -82767836 - B1_Mus1 SINE Alu -10 138 1 6 1224 666 330 95 43 chrX 83882752 83883078 -82767218 + MTEa LTR MaLR 8 350 -29 6 1224 345 308 26 23 chrX 83883117 83883320 -82766976 - L1MEc LINE L1 -5052 2035 1851 6 1224 2295 201 124 7 chrX 83885187 83885777 -82764519 - Lx7 LINE L1 -372 7324 6666 6 1224 700 135 0 16 chrX 83885771 83885899 -82764397 + L1_Mur3 LINE L1 4006 4131 -1749 6 1225 250 212 30 0 chrX 83886147 83886213 -82764083 + (TATATG)n Simple_repeat Simple_repeat 6 73 0 6 1225 407 317 23 85 chrX 83886306 83886482 -82763814 - B4 SINE B4 -117 175 11 6 1225 301 267 79 34 chrX 83886559 83886648 -82763648 - MER20 DNA MER1_type -58 161 69 6 1225 219 204 0 0 chrX 83886703 83886752 -82763544 + A-rich Low_complexity Low_complexity 1 49 0 6 1225 6693 84 25 10 chrX 83887865 83888806 -82761490 - Lx LINE L1 -5 6649 5694 6 1225 12655 4 0 1 chrX 83889175 83891290 -82759006 - L1Md_A LINE L1 0 6582 4469 6 1225 252 0 0 0 chrX 83891679 83891707 -82758589 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 6 1225 235 221 57 29 chrX 83892897 83892967 -82757329 + RMER15 LTR ERVL 277 348 -227 6 1225 3246 33 3 0 chrX 83892967 83893357 -82756939 + L1Md_F3 LINE L1 6166 6556 -28 6 1225 1307 40 0 17 chrX 83893357 83893534 -82756762 + L1Md_F2 LINE L1 6397 6570 -12 6 1225 754 255 82 23 chrX 83893537 83893811 -82756485 + RMER15 LTR ERVL 266 573 -2 6 1225 2097 275 27 25 chrX 83894209 83894757 -82755539 - RMER15 LTR ERVL 0 575 27 6 1225 422 312 100 37 chrX 83896489 83896650 -82753646 - B3A SINE B2 -10 206 36 6 1225 231 36 0 0 chrX 83896710 83896738 -82753558 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1225 533 283 8 0 chrX 83896797 83896917 -82753379 - B3 SINE B2 -93 123 3 6 1225 816 305 28 52 chrX 83897226 83897589 -82752707 - MTE2b LTR MaLR -37 342 11 6 1225 27 0 0 0 chrX 83899033 83899060 -82751236 + AT_rich Low_complexity Low_complexity 1 27 0 6 1225 4471 105 30 20 chrX 83899288 83899979 -82750317 - Lx LINE L1 -1 6653 5956 6 1225 1600 104 58 8 chrX 83899990 83900232 -82750064 - L1Md_F2 LINE L1 -10 6572 6319 6 1225 279 54 0 0 chrX 83900233 83900270 -82750026 - Lx LINE L1 -682 5972 5936 6 1225 203 152 22 0 chrX 83900357 83900403 -82749893 + CT-rich Low_complexity Low_complexity 2 48 0 6 1225 186 213 50 62 chrX 83900720 83900800 -82749496 + L4 LINE RTE 1730 1808 -221 6 1225 225 405 0 0 chrX 83901345 83901429 -82748867 + MIR SINE MIR 17 100 -162 6 1225 285 333 17 57 chrX 83901448 83901623 -82748673 + MER110A LTR ERV1 275 442 -26 6 1225 210 266 138 15 chrX 83901857 83901922 -82748374 - PB1D10 SINE Alu -4 113 41 6 1225 386 206 0 0 chrX 83901882 83901945 -82748351 - 4.5SRNA scRNA scRNA -16 78 16 6 1225 4544 136 88 7 chrX 83901947 83902707 -82747589 + Lx2 LINE L1 6169 6990 -7 6 1225 454 323 30 27 chrX 83903346 83903645 -82746651 + L1MCc LINE L1 19 318 -6105 6 1225 751 319 47 72 chrX 83903658 83904020 -82746276 - ORR1E LTR MaLR -6 353 1 6 1225 459 0 0 0 chrX 83904073 83904124 -82746172 + (TC)n Simple_repeat Simple_repeat 2 52 0 6 1225 333 0 0 0 chrX 83904124 83904160 -82746136 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1225 280 301 14 14 chrX 83904174 83904248 -82746048 - B4A SINE B4 -1 291 218 6 1225 1458 79 16 109 chrX 83904843 83905099 -82745197 - L1_Mus2 LINE L1 -6 6560 6329 6 1225 432 0 0 0 chrX 83905136 83905184 -82745112 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 1225 264 148 16 32 chrX 83905204 83905267 -82745029 + Lx7 LINE L1 7623 7684 -12 6 1225 1572 176 104 90 chrX 83905351 83905575 -82744721 + ORR1B1 LTR MaLR 6 235 -159 6 1225 2360 107 19 5 chrX 83905575 83905942 -82744354 - L1_Mus4 LINE L1 -4 6632 6261 6 1225 1572 176 104 90 chrX 83905942 83906093 -82744203 + ORR1B1 LTR MaLR 236 386 -8 6 1225 21 57 0 0 chrX 83906385 83906420 -82743876 + AT_rich Low_complexity Low_complexity 1 35 0 6 1225 266 320 98 52 chrX 83906772 83907098 -82743198 + L1MCc LINE L1 835 1175 -5248 6 1225 293 279 25 25 chrX 83907106 83907187 -82743109 - B4A SINE B4 -210 82 2 6 1225 405 0 0 0 chrX 83907419 83907464 -82742832 + (CAA)n Simple_repeat Simple_repeat 1 45 0 6 1225 22 35 0 0 chrX 83907580 83907609 -82742687 + AT_rich Low_complexity Low_complexity 1 29 0 6 1225 2536 102 8 3 chrX 83907645 83908007 -82742289 + Lx LINE L1 6279 6642 -12 6 1225 195 42 0 0 chrX 83908007 83908031 -82742265 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1225 237 317 102 62 chrX 83908188 83908316 -82741980 + MLT1F1 LTR MaLR 39 171 -398 6 1225 313 317 164 16 chrX 83908339 83908583 -82741713 + L1MD3 LINE L1 7481 7760 -235 6 1225 323 264 112 62 chrX 83908597 83908775 -82741521 - MTD LTR MaLR -14 405 219 6 1225 787 321 106 20 chrX 83908810 83908991 -82741305 - Lx8 LINE L1 -320 7153 6968 6 1225 333 0 0 0 chrX 83908991 83909028 -82741268 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1225 787 321 106 20 chrX 83909028 83909297 -82740999 - Lx8 LINE L1 -506 6967 6666 6 1225 3715 114 12 49 chrX 83909302 83910075 -82740221 + L1VL4 LINE L1 378 1121 -2438 6 1225 33455 77 3 5 chrX 83910121 83915282 -82735014 + L1Md_F3 LINE L1 439 5585 -298 6 1225 8289 37 5 1 chrX 83915283 83916277 -82734019 + L1Md_F3 LINE L1 5587 6584 0 6 1225 11468 164 74 27 chrX 83916280 83918770 -82731526 + L1_Mur1 LINE L1 1478 4085 -1801 6 1225 7912 148 57 16 chrX 83918770 83920269 -82730027 + ORR1A2-int LTR MaLR 404 1963 0 6 1225 1908 139 9 73 chrX 83920269 83920610 -82729686 + ORR1A2 LTR MaLR 1 319 -8 6 1225 588 14 0 0 chrX 83920612 83920681 -82729615 + (TC)n Simple_repeat Simple_repeat 1 69 0 6 1225 581 264 0 51 chrX 83920886 83921042 -82729254 + Lx9 LINE L1 7031 7178 -466 6 1225 310 238 118 45 chrX 83921248 83921358 -82728938 + MLT1A0 LTR MaLR 3 120 -254 6 1225 460 349 57 5 chrX 83921943 83922136 -82728160 + MLT1A0 LTR MaLR 135 337 -28 6 1225 1237 261 64 9 chrX 83922135 83922463 -82727833 - ORR1E LTR MaLR -10 349 4 6 1225 234 185 0 71 chrX 83923050 83923120 -82727176 + A-rich Low_complexity Low_complexity 2 66 0 6 1225 5898 125 20 4 chrX 83923420 83924752 -82725544 + Lx4A LINE L1 5198 6552 -506 6 1225 1745 188 67 9 chrX 83924735 83925062 -82725234 + Lx4A LINE L1 6708 7053 -5 6 1225 5026 59 3 2 chrX 83925658 83926303 -82723993 + L1_Mus2 LINE L1 5920 6565 -1 6 1225 1513 206 74 13 chrX 83926318 83926711 -82723585 - Lx9 LINE L1 -22 7622 7206 6 1225 380 308 36 27 chrX 83926711 83926821 -82723475 - MLT1G LTR MaLR -334 257 147 6 1225 232 340 15 18 chrX 83927053 83927164 -82723132 - MIRc SINE MIR -74 194 82 6 1225 502 185 95 82 chrX 83928387 83928534 -82721762 + B1_Mur2 SINE Alu 1 149 0 6 1225 22 70 0 0 chrX 83929758 83929801 -82720495 + AT_rich Low_complexity Low_complexity 1 43 0 6 1225 774 242 421 0 chrX 83930122 83930385 -82719911 - MTE2b LTR MaLR -4 375 2 6 1225 675 339 41 12 chrX 83930389 83930631 -82719665 + B4 SINE B4 40 288 -4 6 1225 246 351 0 25 chrX 83931233 83931312 -82718984 + MLT1H2 LTR MaLR 78 154 -335 6 1225 2252 150 21 13 chrX 83931454 83931833 -82718463 - ORR1B1 LTR MaLR -7 387 6 6 1225 330 361 39 6 chrX 83933020 83933201 -82717095 - L2a LINE L2 -20 3406 3220 6 1225 22 35 0 0 chrX 83933479 83933508 -82716788 + AT_rich Low_complexity Low_complexity 1 29 0 6 1225 249 401 6 6 chrX 83934711 83934894 -82715402 - L1MEc LINE L1 -6175 225 43 6 1225 272 254 125 14 chrX 83935149 83935221 -82715075 + PB1D10 SINE Alu 3 82 -35 6 1225 460 293 7 73 chrX 83935225 83935376 -82714920 + B4A SINE B4 147 287 -5 6 1225 457 133 0 20 chrX 83935410 83935510 -82714786 + (CA)n Simple_repeat Simple_repeat 1 98 0 6 1225 2660 81 0 0 chrX 83935955 83936301 -82713995 - L1_Mus2 LINE L1 -2 6564 6219 6 1225 1452 53 0 0 chrX 83937960 83938300 -82711996 + (GGAA)n Simple_repeat Simple_repeat 1 340 0 6 1225 6939 156 21 18 chrX 83938438 83939688 -82710608 - Lx4A LINE L1 -2 7056 5803 6 1225 5454 140 20 7 chrX 83939688 83940607 -82709689 + Lx4A LINE L1 4856 5786 -91 6 1225 25 0 0 0 chrX 83940914 83940939 -82709357 + AT_rich Low_complexity Low_complexity 1 25 0 6 1225 8282 212 35 100 chrX 83940950 83941920 -82708376 - Lx7 LINE L1 -9 7687 6806 7 1225 512 105 0 0 chrX 83941920 83941996 -82708300 - URR1B DNA MER1_type -6 219 144 7 1225 8282 212 35 100 chrX 83941996 83942043 -82708253 - Lx7 LINE L1 -9 6805 6762 7 1225 4086 36 12 2 chrX 83942043 83942537 -82707759 - L1Md_F3 LINE L1 0 6584 6086 7 1225 382 94 0 45 chrX 83942546 83942613 -82707683 - L1_Mus1 LINE L1 0 6567 6504 7 1225 8282 201 35 60 chrX 83942613 83944048 -82706248 - Lx7 LINE L1 -937 6759 5302 7 1225 1219 83 16 32 chrX 83944048 83944235 -82706061 - B2_Mm2 SINE B2 -9 186 3 7 1225 8282 201 35 60 chrX 83944235 83945925 -82704371 - Lx7 LINE L1 -937 5301 3582 7 1225 1366 237 52 22 chrX 83945925 83946292 -82704004 - ORR1C1 LTR MaLR 0 378 1 7 1225 2660 164 52 42 chrX 83946295 83946477 -82703819 - Lx7 LINE L1 -3622 2258 2072 7 1225 356 73 36 0 chrX 83946477 83946532 -82703764 + (TATG)n Simple_repeat Simple_repeat 4 60 0 7 1225 2660 164 52 42 chrX 83946532 83946962 -82703334 - Lx7 LINE L1 -3809 2071 1642 7 1225 641 293 10 20 chrX 83946969 83947164 -82703132 - B3A SINE B2 -5 193 1 7 1225 583 239 155 40 chrX 83947443 83947617 -82702679 - B3A SINE B2 -3 195 2 7 1225 590 279 80 12 chrX 83947704 83947867 -82702429 - MTE2a LTR MaLR -203 176 3 7 1225 2001 152 60 47 chrX 83947903 83948114 -82702182 - Lx7 LINE L1 -4223 1657 1438 7 1225 5942 61 22 4 chrX 83948114 83948891 -82701405 + L1Md_F2 LINE L1 5792 6582 0 7 1225 4738 152 60 47 chrX 83948891 83949087 -82701209 - Lx7 LINE L1 -4443 1437 1239 7 1225 4147 194 31 35 chrX 83949087 83949950 -82700346 - RMER13A LTR ERVK 0 860 1 7 1225 4738 202 30 23 chrX 83949950 83950867 -82699429 - Lx7 LINE L1 -6490 1238 299 7 1225 426 346 5 80 chrX 83952524 83952725 -82697571 - MLT2D LTR ERVL -14 400 215 7 1225 358 217 161 2 chrX 83952742 83952864 -82697432 - MLT2D LTR ERVL -251 146 9 7 1225 413 283 138 14 chrX 83953309 83953599 -82696697 + L1MC2 LINE L1 5930 6255 -89 7 1225 779 191 0 34 chrX 83953661 83953807 -82696489 + B1_Mm SINE Alu 6 146 -1 7 1225 250 137 9 56 chrX 83953821 83953929 -82696367 + (CAAA)n Simple_repeat Simple_repeat 2 104 0 7 1225 549 301 14 0 chrX 83953979 83954122 -82696174 + RSINE1 SINE B4 2 146 -19 7 1225 23 0 0 0 chrX 83954145 83954168 -82696128 + AT_rich Low_complexity Low_complexity 1 23 0 7 1225 1556 284 65 24 chrX 83954186 83954724 -82695572 - Lx9 LINE L1 -727 6917 6358 7 1225 470 294 22 22 chrX 83955052 83955191 -82695105 + RSINE1 SINE B4 27 165 0 7 1225 23 0 0 0 chrX 83955947 83955970 -82694326 + AT_rich Low_complexity Low_complexity 1 23 0 7 1225 592 293 124 44 chrX 83956742 83956967 -82693329 + MLT1E LTR MaLR 302 544 -109 7 1225 30 45 0 0 chrX 83957036 83957080 -82693216 + AT_rich Low_complexity Low_complexity 1 44 0 7 1225 203 156 30 45 chrX 83957350 83957417 -82692879 + (TATAA)n Simple_repeat Simple_repeat 5 70 0 7 1225 893 289 83 7 chrX 83957447 83957747 -82692549 - MER2 DNA MER2_type -6 339 17 7 1225 1939 103 6 81 chrX 83958295 83958642 -82691654 + ORR1A4 LTR MaLR 1 321 -8 7 1225 692 258 56 10 chrX 83958684 83958847 -82691449 + B3 SINE B2 1 166 -50 7 1225 267 31 0 0 chrX 83958847 83958879 -82691417 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 1225 692 258 56 10 chrX 83958879 83958911 -82691385 + B3 SINE B2 167 204 -12 7 1225 1158 91 54 0 chrX 83959377 83959563 -82690733 - L1_Mus2 LINE L1 0 6566 6371 7 1225 423 69 0 65 chrX 83959984 83960061 -82690235 + L1Md_F2 LINE L1 6510 6581 -1 7 1225 486 0 0 0 chrX 83960715 83960769 -82689527 + (CTAA)n Simple_repeat Simple_repeat 3 56 0 7 1225 1249 61 9 0 chrX 83961289 83961519 -82688777 + (TTTC)n Simple_repeat Simple_repeat 1 232 0 7 1225 460 376 81 37 chrX 83961949 83962272 -82688024 - LTR16B1 LTR ERVL 0 480 144 7 1225 1106 146 32 0 chrX 83962558 83962743 -82687553 - B2_Mm2 SINE B2 -3 192 2 7 1225 696 267 18 47 chrX 83962995 83963164 -82687132 + RSINE1 SINE B4 2 165 0 7 1225 3974 117 16 53 chrX 83963186 83963924 -82686372 - L1_Mur2 LINE L1 -2246 3631 2921 7 1225 549 68 0 0 chrX 83964050 83964124 -82686172 + (CA)n Simple_repeat Simple_repeat 1 74 0 7 1225 3014 73 2 0 chrX 83964181 83964579 -82685717 - L1_Mus1 LINE L1 0 6567 6169 7 1225 701 166 110 0 chrX 83964617 83964780 -82685516 + Lx9 LINE L1 7457 7637 -7 7 1225 204 143 0 0 chrX 83965114 83965156 -82685140 + (A)n Simple_repeat Simple_repeat 1 42 0 7 1225 829 219 77 0 chrX 83965165 83965348 -82684948 + B3 SINE B2 3 199 -17 7 1225 255 125 0 0 chrX 83965348 83965388 -82684908 + (CAT)n Simple_repeat Simple_repeat 1 40 0 7 1225 317 358 55 86 chrX 83966813 83967195 -82683101 + ORR1D2 LTR MaLR 1 370 0 7 1225 466 299 67 26 chrX 83967409 83967677 -82682619 + LTR37B LTR ERV1 172 450 -18 7 1225 521 311 44 0 chrX 83967890 83968025 -82682271 + RSINE1 SINE B4 7 147 -18 7 1225 462 49 0 0 chrX 83968028 83968089 -82682207 + (TA)n Simple_repeat Simple_repeat 1 61 0 7 1225 201 312 49 12 chrX 83968826 83968907 -82681389 - MIR SINE MIR -70 192 109 7 1225 262 414 62 0 chrX 83969077 83969239 -82681057 + MLT1F2 LTR MaLR 15 186 -374 7 1225 269 198 12 0 chrX 83969258 83969344 -82680952 + CT-rich Low_complexity Low_complexity 2 88 0 7 1225 337 370 81 18 chrX 83969488 83969711 -82680585 + MLT1F2 LTR MaLR 310 546 -14 7 1225 1010 244 186 7 chrX 83970112 83970541 -82679755 + RMER20A LTR ERVK 11 516 0 7 1225 4127 119 9 6 chrX 83970809 83971902 -82678394 + L1VL4 LINE L1 345 1442 -2117 7 1225 255 314 54 60 chrX 83971906 83972072 -82678224 + MLT1F2-int LTR MaLR 627 791 -596 7 1225 346 301 86 59 chrX 83972409 83972430 -82677866 - B2_Mm2 SINE B2 -1 194 175 7 1225 237 65 0 0 chrX 83972430 83972461 -82677835 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 1225 444 283 66 32 chrX 83972461 83972626 -82677670 - B3A SINE B2 -21 174 3 7 1225 274 324 67 0 chrX 83972895 83973000 -82677296 - B4A SINE B4 -172 120 9 7 1225 289 274 11 35 chrX 83973007 83973094 -82677202 - B4A SINE B4 -196 96 12 7 1225 784 265 29 24 chrX 83973191 83973396 -82676900 - B3 SINE B2 -9 207 2 7 1225 21 0 0 0 chrX 83973403 83973424 -82676872 + AT_rich Low_complexity Low_complexity 1 21 0 7 1225 1125 88 0 0 chrX 83973643 83973790 -82676506 - B1_Mus1 SINE Alu -1 147 1 7 1225 26 0 0 0 chrX 83973831 83973857 -82676439 + AT_rich Low_complexity Low_complexity 1 26 0 7 1225 288 0 0 0 chrX 83974711 83974743 -82675553 + (TC)n Simple_repeat Simple_repeat 2 33 0 7 1225 228 216 0 0 chrX 83974745 83974796 -82675500 + (TATG)n Simple_repeat Simple_repeat 1 51 0 7 1225 243 244 0 0 chrX 83975960 83976038 -82674258 + CT-rich Low_complexity Low_complexity 3 80 0 7 1225 1190 199 154 41 chrX 83976137 83976482 -82673814 + ORR1C2 LTR MaLR 1 384 0 7 1225 246 62 0 0 chrX 83979695 83979727 -82670569 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 1225 23 0 0 0 chrX 83980392 83980415 -82669881 + AT_rich Low_complexity Low_complexity 1 23 0 7 1225 657 200 0 88 chrX 83980975 83981134 -82669162 + B1_Mur4 SINE Alu 1 145 -5 7 1225 642 89 0 0 chrX 83981134 83981224 -82669072 + (GGGA)n Simple_repeat Simple_repeat 4 93 0 7 1225 493 71 35 12 chrX 83981228 83981314 -82668982 + (GAAAA)n Simple_repeat Simple_repeat 3 90 0 7 1225 380 364 55 18 chrX 83981481 83981811 -82668485 + Lx8 LINE L1 7115 7456 -17 7 1225 4674 153 26 12 chrX 83982167 83982981 -82667315 + Lx4A LINE L1 6223 7047 -11 7 1225 24 0 0 0 chrX 83983072 83983096 -82667200 + AT_rich Low_complexity Low_complexity 1 24 0 7 1225 520 158 32 0 chrX 83985254 83985349 -82664947 + B1_Mus2 SINE Alu 40 137 -10 7 1225 21 0 0 0 chrX 83986170 83986191 -82664105 + AT_rich Low_complexity Low_complexity 1 21 0 7 1225 246 62 0 0 chrX 83987688 83987720 -82662576 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 7 1225 22 35 0 0 chrX 83988095 83988124 -82662172 + AT_rich Low_complexity Low_complexity 1 29 0 7 1225 378 265 98 0 chrX 83988878 83988980 -82661316 + PB1D10 SINE Alu 6 117 0 7 1225 198 0 0 0 chrX 83990207 83990229 -82660067 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 7 1225 21 71 0 0 chrX 83991077 83991119 -82659177 + AT_rich Low_complexity Low_complexity 1 42 0 7 1225 194 148 19 0 chrX 83991644 83991698 -82658598 + T-rich Low_complexity Low_complexity 1 55 0 7 1225 312 48 0 0 chrX 83991702 83991744 -82658552 + (TA)n Simple_repeat Simple_repeat 1 42 0 7 1225 21 71 0 0 chrX 83993888 83993930 -82656366 + AT_rich Low_complexity Low_complexity 1 42 0 7 1225 7664 29 3 3 chrX 83994121 83995031 -82655265 - L1Md_F2 LINE L1 -8 6574 5665 7 1225 186 206 0 0 chrX 83995382 83995416 -82654880 - L3b LINE CR1 -262 220 187 7 1225 24 24 0 24 chrX 83995666 83995679 -82654617 + AT_rich Low_complexity Low_complexity 1 13 0 7 1225 1272 78 61 0 chrX 83995679 83995859 -82654437 + B2_Mm2 SINE B2 2 192 -3 7 1225 24 24 0 24 chrX 83995859 83995887 -82654409 + AT_rich Low_complexity Low_complexity 1 28 0 7 1225 838 327 82 37 chrX 83995900 83996114 -82654182 + Lx9 LINE L1 7058 7267 -377 7 1225 248 0 0 30 chrX 83996114 83996147 -82654149 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 7 1225 838 327 82 37 chrX 83996147 83996469 -82653827 + Lx9 LINE L1 7268 7618 -26 7 1225 216 0 0 0 chrX 83996526 83996550 -82653746 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 7 1225 409 320 0 0 chrX 83997683 83997780 -82652516 - PB1D10 SINE Alu -8 109 13 7 1225 427 314 36 68 chrX 83997812 83998070 -82652226 + B4A SINE B4 13 272 -20 7 1225 293 258 30 0 chrX 83998271 83998337 -82651959 + ID SINE ID 17 84 -140 7 1225 298 280 4 0 chrX 83998337 83998352 -82651944 + ID4 SINE ID 17 98 -54 7 1225 586 306 16 11 chrX 83998921 83999109 -82651187 + RMER15 LTR ERVL 374 562 -13 7 1225 241 276 123 75 chrX 84000077 84000183 -82650113 + LTR82A LTR ERVL 323 433 -439 1 1225 629 224 20 20 chrX 84000349 84000495 -82649801 - B1_Mur1 SINE Alu -1 148 3 2 1225 247 291 100 56 chrX 84000521 84000681 -82649615 + LTR82A LTR ERVL 706 872 0 1 1225 289 312 0 0 chrX 84001681 84001758 -82648538 - BC1_Mm scRNA scRNA -62 90 14 3 1225 225 345 0 0 chrX 84001706 84001764 -82648532 - tRNA-Ala-GCG tRNA tRNA -16 59 2 4 1225 7168 130 15 3 chrX 84001880 84003656 -82646640 + Lx2 LINE L1 4862 6645 -352 5 1225 1295 134 74 0 chrX 84003645 84003862 -82646434 + Lx2 LINE L1 6765 6997 0 5 1225 388 75 0 0 chrX 84004059 84004112 -82646184 + B2_Mm2 SINE B2 1 53 -142 6 1225 270 0 0 0 chrX 84004126 84004156 -82646140 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 7 1225 409 253 0 0 chrX 84004318 84004405 -82645891 - B3 SINE B2 -129 87 1 8 1225 22 0 0 0 chrX 84005277 84005299 -82644997 + AT_rich Low_complexity Low_complexity 1 22 0 9 1225 22 35 0 0 chrX 84005422 84005451 -82644845 + AT_rich Low_complexity Low_complexity 1 29 0 1 1225 2626 152 13 49 chrX 84005825 84006351 -82643945 + Lx2B LINE L1 6494 7000 0 1 1225 397 283 7 24 chrX 84007624 84007748 -82642548 - PB1D10 SINE Alu -5 145 15 1 1225 616 335 138 84 chrX 84007748 84008322 -82641974 - LTR87 LTR ERVL? -19 605 1 1 1225 1866 237 100 9 chrX 84008862 84009313 -82640983 + RMER15 LTR ERVL 84 575 0 1 1225 243 237 0 0 chrX 84009573 84009632 -82640664 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 1225 1724 195 139 11 chrX 84010334 84010707 -82639589 + MTC LTR MaLR 1 421 0 1 1225 825 307 67 28 chrX 84010782 84011378 -82638918 + L1ME2 LINE L1 5532 6161 -18 1 1225 483 169 34 8 chrX 84011750 84011869 -82638427 - Lx9 LINE L1 -1 7643 7522 1 1225 282 29 0 0 chrX 84012771 84012806 -82637490 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1225 198 71 0 0 chrX 84012862 84012890 -82637406 + (CAAAAA)n Simple_repeat Simple_repeat 1 28 0 2 1225 250 222 28 0 chrX 84013177 84013249 -82637047 + (TA)n Simple_repeat Simple_repeat 2 75 0 2 1225 198 71 0 0 chrX 84014361 84014389 -82635907 + (TTTTTG)n Simple_repeat Simple_repeat 1 28 0 2 1225 246 32 0 0 chrX 84014445 84014476 -82635820 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1225 210 128 0 0 chrX 84014681 84014720 -82635576 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1225 207 0 0 0 chrX 84014720 84014742 -82635554 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 1225 368 297 65 7 chrX 84016852 84016991 -82633305 - B1F SINE Alu -2 147 1 2 153 3917 37 0 8 chrX 84016998 84017483 -82632813 - L1Md_F3 LINE L1 0 6584 6104 2 1226 201 271 127 90 chrX 84018223 84018389 -82631907 - L3 LINE CR1 -583 3906 3735 2 1226 2025 156 14 55 chrX 84018795 84019210 -82631086 + RMER10B LTR ERVL 1 398 0 2 1226 363 89 0 0 chrX 84019292 84019348 -82630948 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1226 4057 60 58 7 chrX 84019392 84019945 -82630351 - L1Md_F2 LINE L1 -2 6580 6000 3 1226 274 0 0 0 chrX 84019946 84019976 -82630320 + L1Md_F2 LINE L1 5985 6014 -568 3 1226 455 328 57 0 chrX 84019979 84020101 -82630195 - B3A SINE B2 -69 129 1 3 1226 189 273 43 57 chrX 84020877 84020947 -82629349 + L4 LINE RTE 916 984 -1045 3 1226 337 276 47 27 chrX 84020958 84021107 -82629189 + MER5A1 DNA MER1_type 13 164 -2 3 1226 530 357 79 15 chrX 84021347 84021549 -82628747 + MER20 DNA MER1_type 1 215 -4 3 1226 3713 38 0 5 chrX 84021963 84022403 -82627893 + L1_Mm LINE L1 5147 5585 -298 3 1226 7596 61 10 21 chrX 84022403 84023409 -82626887 + L1Md_F2 LINE L1 5587 6581 -1 3 1226 738 250 4 176 chrX 84023453 84023686 -82626610 - B3A SINE B2 0 198 3 3 1226 192 336 98 8 chrX 84024612 84024735 -82625561 + MIRm SINE MIR 143 276 0 3 1226 497 333 62 25 chrX 84024959 84025202 -82625094 - MIR SINE MIR -10 252 1 4 1226 422 68 17 0 chrX 84025285 84025344 -82624952 + URR1B DNA MER1_type 165 224 -1 4 1226 225 194 79 16 chrX 84025289 84025352 -82624944 - CYRA11_Mm Unknown Y-chromosome -386 231 165 4 1226 351 0 0 0 chrX 84025724 84025763 -82624533 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1226 453 50 0 0 chrX 84025763 84025822 -82624474 + (GA)n Simple_repeat Simple_repeat 2 61 0 4 1226 552 15 0 0 chrX 84026116 84026181 -82624115 + (TC)n Simple_repeat Simple_repeat 2 66 0 4 1226 467 60 118 20 chrX 84026222 84026324 -82623972 + L1_Mus3 LINE L1 6526 6637 -1 4 1226 477 115 0 0 chrX 84026343 84026430 -82623866 + (TA)n Simple_repeat Simple_repeat 2 88 0 4 1226 1171 49 0 0 chrX 84026431 84026573 -82623723 - B1_Mus1 SINE Alu -6 142 1 4 1226 2032 45 0 0 chrX 84026591 84026837 -82623459 - L1Md_F2 LINE L1 -12 6570 6325 4 1226 473 19 0 0 chrX 84026837 84026891 -82623405 + L1Md_F2 LINE L1 5986 6039 -543 5 1226 263 328 69 0 chrX 84026891 84027007 -82623289 + RMER12 LTR ERVK 727 850 -472 5 1226 3031 68 0 0 chrX 84027323 84027708 -82622588 + L1_Mus1 LINE L1 6183 6567 0 5 1226 26 93 0 0 chrX 84028171 84028246 -82622050 + AT_rich Low_complexity Low_complexity 1 75 0 5 1226 658 308 0 0 chrX 84028256 84028270 -82622026 - B3 SINE B2 -36 180 167 5 1226 243 0 0 0 chrX 84028270 84028297 -82621999 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1226 658 308 0 0 chrX 84028297 84028438 -82621858 - B3 SINE B2 -50 166 26 5 1226 486 143 8 16 chrX 84029303 84029424 -82620872 + (CA)n Simple_repeat Simple_repeat 2 121 0 5 1226 202 337 145 11 chrX 84029694 84029880 -82620416 - MIRb SINE MIR -11 257 47 5 1226 1102 43 0 0 chrX 84032078 84032218 -82618078 + L1_Mus2 LINE L1 6427 6566 0 5 1226 502 316 15 0 chrX 84032472 84032608 -82617688 - B1F SINE Alu -5 144 7 5 1226 207 0 0 0 chrX 84033237 84033260 -82617036 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 6 1226 563 226 68 0 chrX 84033410 84033556 -82616740 - L1MC4a LINE L1 -337 7545 7390 6 1226 22 56 0 0 chrX 84033712 84033748 -82616548 + AT_rich Low_complexity Low_complexity 1 36 0 6 1226 1874 102 18 7 chrX 84034228 84034505 -82615791 - L1_Mus2 LINE L1 -1 6565 6286 6 1226 2331 85 0 0 chrX 84034505 84034811 -82615485 + L1_Mus2 LINE L1 5990 6295 -271 6 1226 267 264 27 14 chrX 84035216 84035289 -82615007 + MT2B2 LTR ERVL 167 240 -344 6 1226 416 303 80 24 chrX 84035225 84035350 -82614946 + B1F2 SINE Alu 12 143 -6 6 1226 338 264 0 0 chrX 84035366 84035438 -82614858 + ID4 SINE ID 12 83 0 6 1226 3103 118 164 2 chrX 84035505 84036022 -82614274 + MT2B LTR ERVL 1 601 0 6 1226 452 260 0 0 chrX 84036141 84036237 -82614059 - PB1D10 SINE Alu -7 110 15 6 1226 5676 121 122 22 chrX 84036705 84037705 -82612591 + Lx3A LINE L1 66 1165 -5819 6 1226 32179 80 18 15 chrX 84038158 84041594 -82608702 + Lx3A LINE L1 1150 4635 -1251 6 1226 270 0 0 0 chrX 84041594 84041624 -82608672 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 1226 32179 102 12 13 chrX 84041624 84044012 -82606284 + Lx3A LINE L1 4636 6975 -6 6 1226 679 260 123 6 chrX 84044218 84044388 -82605908 - B3 SINE B2 -26 190 1 7 1226 23 33 0 0 chrX 84044844 84044874 -82605422 + AT_rich Low_complexity Low_complexity 1 30 0 7 1226 689 224 14 7 chrX 84044875 84045023 -82605273 - B1_Mur1 SINE Alu 0 149 1 7 1226 378 227 70 0 chrX 84045023 84045151 -82605145 + Lx9 LINE L1 7507 7643 -1 7 1226 1397 179 38 160 chrX 84046001 84046427 -82603869 + ORR1D1 LTR MaLR 1 374 0 7 1226 854 204 6 17 chrX 84047164 84047343 -82602953 + B2_Mm2 SINE B2 1 177 -18 7 1226 195 42 0 0 chrX 84048323 84048347 -82601949 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 7 1226 22 35 0 0 chrX 84049838 84049867 -82600429 + AT_rich Low_complexity Low_complexity 1 29 0 7 1226 3634 86 0 25 chrX 84049974 84050490 -82599806 + L1Md_F2 LINE L1 6077 6579 -3 7 1226 210 160 60 0 chrX 84050934 84050984 -82599312 + T-rich Low_complexity Low_complexity 5 57 0 8 1226 1229 158 118 15 chrX 84053440 84053703 -82596593 + Lx4A LINE L1 6769 7058 0 8 1226 310 384 35 21 chrX 84053957 84054098 -82596198 + MLT2F LTR ERVL 1 143 -520 8 1226 304 314 101 39 chrX 84054120 84054249 -82596047 + MLT2F LTR ERVL 195 331 -332 8 1226 220 154 0 37 chrX 84054408 84054462 -82595834 + CT-rich Low_complexity Low_complexity 1 52 0 8 1226 3543 88 4 2 chrX 84054608 84055088 -82595208 + L1Md_F2 LINE L1 6027 6507 -75 8 1226 711 270 56 40 chrX 84055082 84055464 -82594832 + Lx7 LINE L1 7205 7696 0 8 1226 1106 277 24 3 chrX 84055481 84055774 -82594522 + Lx8 LINE L1 6887 7185 -288 8 1226 394 233 88 47 chrX 84055772 84055943 -82594353 + Lx8 LINE L1 7290 7467 -6 8 1226 676 313 70 18 chrX 84055941 84056227 -82594069 + Lx9 LINE L1 7173 7473 -171 8 1226 25 65 0 0 chrX 84056320 84056366 -82593930 + AT_rich Low_complexity Low_complexity 1 46 0 8 1226 474 282 7 78 chrX 84056430 84056584 -82593712 + B1_Mur1 SINE Alu 1 143 -6 8 1226 575 248 28 0 chrX 84056963 84057104 -82593192 + B1_Mur2 SINE Alu 5 149 0 9 1226 202 87 21 21 chrX 84057570 84057617 -82592679 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 9 1226 346 293 14 128 chrX 84057653 84057794 -82592502 + RMER10B LTR ERVL 274 398 0 9 1226 203 360 0 53 chrX 84058863 84058957 -82591339 + MIRb SINE MIR 170 258 -10 9 1226 520 284 9 0 chrX 84060833 84060949 -82589347 - RSINE1 SINE B4 -2 163 47 9 1226 1571 198 80 27 chrX 84061049 84061217 -82589079 + RMER10B LTR ERVL 6 196 -202 9 1226 258 106 0 0 chrX 84061217 84061264 -82589032 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 9 1226 1571 198 80 27 chrX 84061264 84061468 -82588828 + RMER10B LTR ERVL 197 398 0 9 1226 1945 248 24 80 chrX 84062544 84063268 -82587028 + Lx9 LINE L1 4925 5607 -240 9 1226 423 0 0 0 chrX 84063269 84063316 -82586980 + (CA)n Simple_repeat Simple_repeat 2 48 0 9 1226 309 300 35 53 chrX 84063323 84063454 -82586842 + Lx9 LINE L1 5889 6016 -1628 9 1226 1990 181 129 62 chrX 84063454 84063950 -82586346 + RLTR24 LTR ERV1 1 529 0 9 1226 309 300 35 53 chrX 84063950 84063987 -82586309 + Lx9 LINE L1 6017 6053 -1591 9 1226 456 67 0 0 chrX 84064077 84064137 -82586159 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 1226 405 172 0 0 chrX 84064144 84064208 -82586088 - B3 SINE B2 -152 64 1 1 1226 23 68 0 0 chrX 84065503 84065547 -82584749 + AT_rich Low_complexity Low_complexity 1 44 0 1 1226 393 266 99 21 chrX 84065625 84065767 -82584529 + Lx9 LINE L1 7225 7377 -267 9 1226 23 68 0 0 chrX 84065943 84065987 -82584309 + AT_rich Low_complexity Low_complexity 1 44 0 1 1226 23 33 0 0 chrX 84066063 84066093 -82584203 + AT_rich Low_complexity Low_complexity 1 30 0 1 1226 438 378 77 31 chrX 84066213 84066669 -82583627 - L2a LINE L2 -18 3408 2932 1 1226 219 357 23 23 chrX 84066759 84066888 -82583408 - L2a LINE L2 -732 2687 2559 1 1226 38538 7 1 1 chrX 84066926 84072908 -82577388 + L1Md_A LINE L1 1 5586 -297 1 1226 9001 3 0 0 chrX 84072909 84073943 -82576353 + L1Md_A LINE L1 5588 6582 0 1 1226 4670 122 48 7 chrX 84073975 84074712 -82575584 + Lx2 LINE L1 6231 6997 0 1 1226 366 278 73 18 chrX 84074833 84074943 -82575353 - PB1D7 SINE Alu -4 116 1 1 1226 430 217 200 0 chrX 84075886 84076006 -82574290 - B1_Mur3 SINE Alu -5 144 1 1 1226 21 89 0 0 chrX 84076358 84076414 -82573882 + AT_rich Low_complexity Low_complexity 1 56 0 1 1226 22 35 0 0 chrX 84076635 84076664 -82573632 + AT_rich Low_complexity Low_complexity 1 29 0 1 1226 440 272 60 100 chrX 84076669 84076869 -82573427 - B3A SINE B2 -4 194 3 1 1226 2524 189 2 4 chrX 84077751 84078239 -82572057 + Lx3B LINE L1 1439 1925 -3955 1 1226 14230 158 46 28 chrX 84078250 84081007 -82569289 + Lx3B LINE L1 2941 5747 -130 1 1226 4121 31 0 0 chrX 84081003 84081668 -82568628 - L1Md_F2 LINE L1 -527 6055 5391 1 1226 3949 39 0 0 chrX 84081660 84082125 -82568171 + L1Md_F2 LINE L1 6033 6497 -85 1 1226 4058 11 0 2 chrX 84082127 84082593 -82567703 - MERVL-int LTR ERVL -4289 1196 732 1 1226 512 81 35 0 chrX 84082593 84082680 -82567616 + L1Md_F2 LINE L1 6492 6581 -1 1 1226 785 168 0 0 chrX 84082680 84082811 -82567485 + Lx3B LINE L1 5745 5875 -1098 1 1226 613 250 138 92 chrX 84082811 84083071 -82567225 - RLTR25B LTR ERVK 0 1028 757 1 1226 3279 177 99 54 chrX 84083201 84083416 -82566880 - RLTR25B LTR ERVK -214 889 610 1 1226 318 139 97 0 chrX 84083416 84083488 -82566808 - L1Md_F3 LINE L1 -2 6582 6504 1 1226 3279 167 114 53 chrX 84083488 84084041 -82566255 - RLTR25B LTR ERVK -419 609 1 1 1226 4829 209 75 30 chrX 84084041 84085168 -82565128 + Lx5 LINE L1 5870 7047 -3 1 1226 270 0 0 0 chrX 84085168 84085198 -82565098 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 1226 916 103 45 0 chrX 84085204 84085359 -82564937 - Lx3_Mus LINE L1 0 7009 6848 1 1226 22 0 0 0 chrX 84085810 84085832 -82564464 + AT_rich Low_complexity Low_complexity 1 22 0 1 1226 823 280 9 0 chrX 84086428 84086642 -82563654 - B3 SINE B2 0 216 1 1 1226 300 308 107 39 chrX 84086643 84086981 -82563315 - L1MD2 LINE L1 -2038 5957 5597 1 1226 324 0 0 0 chrX 84087057 84087093 -82563203 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1226 589 249 52 11 chrX 84087326 84087517 -82562779 + L1_Mur3 LINE L1 1576 1774 -4106 1 1226 577 292 7 52 chrX 84087525 84087680 -82562616 - B1_Mur1 SINE Alu 0 149 2 1 1226 800 278 57 52 chrX 84087685 84088107 -82562189 + L1_Mur3 LINE L1 1776 2199 -3681 1 1226 316 208 0 0 chrX 84088173 84088226 -82562070 - Lx8 LINE L1 -1079 6394 6342 1 1226 442 68 135 0 chrX 84088315 84088389 -82561907 + Lx2 LINE L1 6912 6995 -2 1 1226 247 222 0 0 chrX 84088416 84088470 -82561826 + B3 SINE B2 159 212 -4 1 1226 466 296 30 29 chrX 84088623 84088761 -82561535 + RSINE1 SINE B4 8 146 -19 1 1226 243 88 0 0 chrX 84088814 84088848 -82561448 + (GGA)n Simple_repeat Simple_repeat 3 36 0 1 1226 729 87 0 0 chrX 84088851 84088966 -82561330 + (GAAA)n Simple_repeat Simple_repeat 4 118 0 1 1226 228 352 11 0 chrX 84089246 84089334 -82560962 - L2a LINE L2 0 3426 3338 1 1226 219 36 0 0 chrX 84090428 84090456 -82559840 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1226 351 0 0 0 chrX 84090512 84090551 -82559745 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1226 531 0 0 0 chrX 84091268 84091327 -82558969 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 1226 207 389 99 29 chrX 84091658 84091830 -82558466 - MER5A DNA MER1_type -5 184 1 1 1226 321 225 0 0 chrX 84092092 84092181 -82558115 + (TG)n Simple_repeat Simple_repeat 2 90 0 1 1226 649 173 9 0 chrX 84092194 84092304 -82557992 + MTC LTR MaLR 1 111 -310 1 1226 681 169 266 0 chrX 84092304 84092481 -82557815 + URR1B DNA MER1_type 1 224 -1 1 1226 292 143 232 0 chrX 84092492 84092548 -82557748 + RMER6D LTR ERVK 31 99 -621 1 1226 1029 188 74 0 chrX 84092545 84092747 -82557549 + RMER6D LTR ERVK 499 715 -5 1 1226 243 203 0 15 chrX 84093303 84093368 -82556928 + T-rich Low_complexity Low_complexity 3 66 0 1 1226 696 143 0 1 chrX 84093763 84093871 -82556425 + Lx4B LINE L1 6389 6518 -540 1 1226 431 184 46 0 chrX 84093871 84093980 -82556316 + Lx4B LINE L1 6937 7050 -8 1 1226 718 207 22 0 chrX 84094397 84094532 -82555764 - B1_Mus1 SINE Alu 0 148 11 1 1226 259 300 0 62 chrX 84094860 84094924 -82555372 + RSINE1 SINE B4 106 165 0 1 1226 1352 83 0 6 chrX 84095784 84095965 -82554331 - B2_Mm2 SINE B2 -15 180 1 1 1226 201 330 26 44 chrX 84096280 84096394 -82553902 + MIRb SINE MIR 157 268 0 1 1226 410 374 30 15 chrX 84097025 84097294 -82553002 - B4A SINE B4 -18 274 2 1 1226 283 242 124 57 chrX 84098302 84098407 -82551889 - LTR82A LTR ERVL -79 793 682 1 1226 341 306 91 61 chrX 84098606 84098804 -82551492 - LTR82A LTR ERVL -455 417 214 1 1226 204 40 0 0 chrX 84099034 84099059 -82551237 + (CAA)n Simple_repeat Simple_repeat 3 27 0 1 1226 336 48 0 0 chrX 84100156 84100198 -82550098 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1226 368 286 68 41 chrX 84101048 84101194 -82549102 - MER5B DNA MER1_type -5 173 24 1 1226 371 312 43 26 chrX 84101361 84101476 -82548820 + B3 SINE B2 1 117 -99 1 1226 4917 183 100 66 chrX 84101475 84102432 -82547864 - ORR1D1-int LTR MaLR -89 1281 279 1 1226 251 28 28 0 chrX 84102432 84102468 -82547828 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 1 1226 4917 183 100 66 chrX 84102468 84102745 -82547551 - ORR1D1-int LTR MaLR -1092 278 5 1 1226 942 246 14 0 chrX 84102751 84102962 -82547334 - ORR1D1 LTR MaLR -2 372 159 1 1226 627 51 0 0 chrX 84102967 84103046 -82547250 + (GA)n Simple_repeat Simple_repeat 1 79 0 1 1226 21 36 0 0 chrX 84103670 84103698 -82546598 + AT_rich Low_complexity Low_complexity 1 28 0 1 1226 1238 274 77 38 chrX 84104177 84104705 -82545591 - Lx8 LINE L1 -1577 5896 5310 1 1226 2490 178 0 5 chrX 84104705 84105122 -82545174 + Lx4A LINE L1 6638 7052 -6 1 1226 636 14 0 0 chrX 84105122 84105195 -82545101 + (GA)n Simple_repeat Simple_repeat 2 74 0 1 1226 1238 266 78 38 chrX 84105195 84105558 -82544738 - Lx8 LINE L1 -571 5309 4952 1 1226 1374 190 7 43 chrX 84105584 84105865 -82544431 - Lx5 LINE L1 -3 7047 6777 1 1226 24 53 0 0 chrX 84105981 84106019 -82544277 + AT_rich Low_complexity Low_complexity 1 38 0 1 1226 772 172 87 49 chrX 84106021 84106173 -82544123 + B2_Mm2 SINE B2 1 159 -36 1 1226 3320 136 76 9 chrX 84106173 84106752 -82543544 + Lx2 LINE L1 6380 6997 0 1 1226 772 172 87 49 chrX 84106752 84106782 -82543514 + B2_Mm2 SINE B2 160 190 -5 1 1226 462 65 0 0 chrX 84107256 84107318 -82542978 + (TAG)n Simple_repeat Simple_repeat 1 62 0 1 1226 1291 245 37 85 chrX 84107831 84108183 -82542113 + MTE2b LTR MaLR 2 336 -43 1 1226 203 79 0 26 chrX 84108183 84108222 -82542074 + (TTTTG)n Simple_repeat Simple_repeat 5 42 0 1 1226 261 57 0 0 chrX 84108635 84108670 -82541626 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1226 3552 126 21 120 chrX 84108795 84109496 -82540800 + RMER21B LTR ERV1 3 634 -208 1 1226 795 21 0 0 chrX 84109500 84109593 -82540703 + (GAA)n Simple_repeat Simple_repeat 1 93 0 1 1226 1023 233 47 10 chrX 84109594 84109916 -82540380 + RMER21B LTR ERV1 691 947 0 1 1226 281 383 61 38 chrX 84110232 84110525 -82539771 + MamRep605 Unknown Unknown 457 756 -120 1 1226 749 111 26 0 chrX 84111837 84111954 -82538342 + ORR1B1 LTR MaLR 275 394 0 1 1226 496 105 26 0 chrX 84112363 84112439 -82537857 + ORR1B1 LTR MaLR 279 356 -38 1 1226 31 26 0 0 chrX 84112459 84112497 -82537799 + AT_rich Low_complexity Low_complexity 1 38 0 1 1226 207 100 0 0 chrX 84112814 84112844 -82537452 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1226 183 42 0 0 chrX 84115028 84115052 -82535244 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 1226 213 330 113 0 chrX 84117882 84117988 -82532308 + MIRc SINE MIR 104 221 -47 1 1226 1321 141 7 51 chrX 84118632 84118881 -82531415 - L1_Mus2 LINE L1 -345 6221 6030 1 1226 1676 117 0 11 chrX 84119367 84119634 -82530662 + Lx3A LINE L1 6716 6979 -2 1 1226 554 28 14 0 chrX 84119752 84119824 -82530472 + (TCTA)n Simple_repeat Simple_repeat 1 73 0 1 1226 3265 48 2 2 chrX 84120809 84121205 -82529091 + MTA_Mm LTR MaLR 1 396 0 1 1226 1963 99 3 7 chrX 84121356 84121662 -82528634 + L1M4 LINE L1 3198 3502 -412 1 1226 934 173 22 0 chrX 84121651 84121852 -82528444 + L1M4 LINE L1 3460 3666 -2480 1 1226 239 364 0 0 chrX 84121855 84121921 -82528375 + B3 SINE B2 104 169 -47 1 1226 611 208 154 22 chrX 84121925 84122135 -82528161 - L1Md_F LINE L1 -6149 370 205 1 1226 5075 80 1 6 chrX 84122135 84122827 -82527469 + L1_Mus2 LINE L1 5875 6563 -3 1 1226 633 301 13 6 chrX 84124600 84124757 -82525539 + ORR1D2 LTR MaLR 3 160 -210 1 1226 368 214 235 34 chrX 84124907 84125086 -82525210 + B3 SINE B2 1 215 -1 1 1226 4802 104 14 60 chrX 84125271 84126065 -82524231 + Lx3A LINE L1 6217 6973 -8 1 1226 27 0 0 0 chrX 84126303 84126330 -82523966 + AT_rich Low_complexity Low_complexity 1 27 0 1 1226 1070 96 0 20 chrX 84126874 84127023 -82523273 - B1_Mus2 SINE Alu 0 147 2 1 1226 2875 43 0 0 chrX 84127413 84127760 -82522536 - L1Md_F2 LINE L1 -622 5960 5614 1 1226 4985 45 10 3 chrX 84127760 84128377 -82521919 + L1Md_F2 LINE L1 5960 6580 -2 1 1226 3183 302 77 35 chrX 84128810 84128934 -82521362 - Lx8 LINE L1 -1 7472 7350 1 1226 188 67 33 0 chrX 84128934 84128964 -82521332 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1 1226 3183 302 77 35 chrX 84128964 84130194 -82520102 - Lx8 LINE L1 -124 7349 6062 1 1226 558 0 0 0 chrX 84130253 84130315 -82519981 + (TC)n Simple_repeat Simple_repeat 1 62 0 1 1226 1598 294 46 136 chrX 84130376 84130570 -82519726 + L1_Mur3 LINE L1 4651 4839 -1041 1 1226 450 0 0 0 chrX 84130570 84130620 -82519676 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1226 1598 294 46 136 chrX 84130620 84131044 -82519252 + L1_Mur3 LINE L1 4840 5255 -625 1 1226 445 227 31 10 chrX 84131044 84131142 -82519154 + B2_Mm2 SINE B2 2 101 -94 1 1226 1598 294 46 136 chrX 84131142 84131721 -82518575 + L1_Mur3 LINE L1 5256 5826 -54 1 1226 354 23 0 0 chrX 84131721 84131764 -82518532 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1226 1598 294 46 136 chrX 84131764 84131803 -82518493 + L1_Mur3 LINE L1 5827 5865 -15 1 1226 25 31 0 0 chrX 84133701 84133733 -82516563 + AT_rich Low_complexity Low_complexity 1 32 0 2 1226 549 217 75 37 chrX 84133984 84134118 -82516178 - B1_Mur1 SINE Alu -2 147 9 2 1226 207 179 0 0 chrX 84134782 84134821 -82515475 + T-rich Low_complexity Low_complexity 3 41 0 2 1226 469 328 42 21 chrX 84135668 84135858 -82514438 + MER2 DNA MER2_type 4 197 -148 2 1226 24 85 0 0 chrX 84136581 84136640 -82513656 + AT_rich Low_complexity Low_complexity 1 59 0 2 1226 333 0 0 0 chrX 84137310 84137347 -82512949 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1226 26 50 0 0 chrX 84137379 84137419 -82512877 + AT_rich Low_complexity Low_complexity 1 40 0 2 1226 37905 30 0 0 chrX 84137458 84144088 -82506208 - L1Md_T LINE L1 0 6585 1 2 1226 3714 170 63 8 chrX 84144060 84144803 -82505493 - Lx3C LINE L1 -43 7015 6150 2 1226 24 0 0 0 chrX 84144971 84144995 -82505301 + AT_rich Low_complexity Low_complexity 1 24 0 2 1226 1112 216 121 80 chrX 84146340 84146753 -82503543 - RLTR40 LTR ERVK -10 807 378 2 1226 517 236 244 4 chrX 84147075 84147309 -82502987 + Lx9 LINE L1 7329 7618 -26 2 1226 358 300 92 13 chrX 84147346 84147498 -82502798 + MER3 DNA MER1_type 6 169 -40 2 1226 995 266 48 18 chrX 84147694 84147966 -82502330 + Lx9 LINE L1 6500 6779 -865 2 1226 22 56 0 0 chrX 84148058 84148094 -82502202 + AT_rich Low_complexity Low_complexity 1 36 0 2 1227 229 361 16 32 chrX 84149054 84149180 -82501116 + MER5B DNA MER1_type 47 170 -8 2 1227 194 337 48 19 chrX 84149948 84150051 -82500245 - L2a LINE L2 -289 3137 3032 2 1227 189 107 0 0 chrX 84150232 84150260 -82500036 + (TTTC)n Simple_repeat Simple_repeat 3 30 0 2 1227 249 371 81 36 chrX 84150396 84150617 -82499679 - L2a LINE L2 -809 2610 2380 2 1227 680 143 14 7 chrX 84151055 84151196 -82499100 - L1_Mus3 LINE L1 -1 6637 6496 2 1227 325 24 0 0 chrX 84151196 84151237 -82499059 + L1_Mus3 LINE L1 6033 6073 -565 2 1227 2125 134 34 14 chrX 84151312 84151669 -82498627 + Lx2 LINE L1 6630 6993 -4 2 1227 526 299 90 0 chrX 84151716 84151850 -82498446 + RSINE1 SINE B4 3 148 -17 2 1227 324 0 0 0 chrX 84151858 84151894 -82498402 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1227 1973 181 88 14 chrX 84151944 84152387 -82497909 + RLTR13D6 LTR ERVK 427 902 0 2 1227 336 251 28 12 chrX 84152563 84152658 -82497638 + MLT1B LTR MaLR 215 340 -50 2 1227 3306 120 23 4 chrX 84152693 84153205 -82497091 - Lx LINE L1 -5 6649 6128 2 1227 3317 138 18 2 chrX 84153205 84153765 -82496531 + L1_Mm LINE L1 4273 4841 -1042 2 1227 364 306 0 0 chrX 84153815 84153900 -82496396 + ID_B1 SINE B4 130 214 -10 2 1227 244 298 61 41 chrX 84153900 84153913 -82496383 + B1F SINE Alu 49 148 -1 2 1227 2513 129 33 7 chrX 84154540 84154962 -82495334 - Lx LINE L1 -7 6647 6215 2 1227 829 280 159 0 chrX 84154971 84155228 -82495068 - Lx5 LINE L1 -279 6771 6474 2 1227 306 211 51 31 chrX 84155232 84155330 -82494966 - Lx9 LINE L1 -11 7633 7534 2 1227 1783 100 33 43 chrX 84155474 84155776 -82494520 - L1Md_F2 LINE L1 -12 6570 6272 2 1227 34474 78 12 6 chrX 84155791 84161275 -82489021 - L1Md_F LINE L1 0 5883 364 2 1227 240 163 0 0 chrX 84161601 84161644 -82488652 - ID_B1 SINE B4 -2 222 180 2 1227 196 363 92 12 chrX 84161991 84162164 -82488132 - L2b LINE L2 -228 3147 2961 2 1227 1467 109 183 0 chrX 84164561 84164818 -82485478 + Lx2 LINE L1 6680 6983 -14 2 1227 207 0 0 0 chrX 84164827 84164850 -82485446 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1227 220 337 0 12 chrX 84165097 84165181 -82485115 + L2a LINE L2 3344 3426 0 2 1227 9079 114 19 6 chrX 84166133 84167764 -82482532 + Lx3A LINE L1 5329 6979 -2 2 1227 730 48 19 0 chrX 84167783 84167886 -82482410 + (GA)n Simple_repeat Simple_repeat 2 106 0 2 1227 4774 98 69 1 chrX 84168167 84168874 -82481422 - L1_Mus4 LINE L1 -5 6631 5877 2 1227 260 281 10 20 chrX 84168918 84169016 -82481280 - L1M5 LINE L1 -397 5767 5671 2 1227 352 358 99 10 chrX 84169096 84169288 -82481008 - L1M5 LINE L1 -616 5546 5338 2 1227 22 70 0 0 chrX 84171247 84171290 -82479006 + AT_rich Low_complexity Low_complexity 1 43 0 2 1227 471 78 0 0 chrX 84171435 84171499 -82478797 + (TTTCG)n Simple_repeat Simple_repeat 3 66 0 2 1227 673 148 19 0 chrX 84171508 84171616 -82478680 - PB1D9 SINE Alu -10 110 1 2 1227 307 0 23 23 chrX 84171654 84171698 -82478598 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2 1227 250 241 0 0 chrX 84171698 84171752 -82478544 - B1_Mur3 SINE Alu -8 141 88 2 1227 236 157 11 57 chrX 84171833 84171921 -82478375 + CT-rich Low_complexity Low_complexity 2 85 0 2 1227 227 229 11 46 chrX 84171921 84172008 -82478288 + (TCTCTG)n Simple_repeat Simple_repeat 3 86 0 2 1227 400 290 0 18 chrX 84172015 84172124 -82478172 - Tigger5 DNA MER2_type -3 2403 2297 2 1227 232 380 34 50 chrX 84172132 84172251 -82478045 - Tigger5 DNA MER2_type -2172 234 118 2 1227 679 299 17 0 chrX 84172959 84173136 -82477160 + B4A SINE B4 1 180 -112 2 1227 240 333 0 0 chrX 84173569 84173644 -82476652 - Lx9 LINE L1 -935 6709 6635 2 1227 2476 203 80 13 chrX 84173638 84174241 -82476055 + Lx9 LINE L1 6993 7635 -9 2 1227 27 49 0 0 chrX 84174474 84174515 -82475781 + AT_rich Low_complexity Low_complexity 1 41 0 2 1227 22 35 0 0 chrX 84174953 84174982 -82475314 + AT_rich Low_complexity Low_complexity 1 29 0 2 1227 540 274 93 22 chrX 84175034 84175217 -82475079 + B3 SINE B2 8 203 -13 2 1227 3584 124 41 4 chrX 84175611 84176169 -82474127 + L1_Mus3 LINE L1 6055 6633 -5 2 1227 23 0 0 0 chrX 84176172 84176195 -82474101 + AT_rich Low_complexity Low_complexity 1 23 0 2 1227 357 279 7 157 chrX 84176601 84176632 -82473664 - RSINE1 SINE B4 0 165 141 2 1227 180 0 0 0 chrX 84176632 84176652 -82473644 + (TG)n Simple_repeat Simple_repeat 2 21 0 2 1227 357 279 7 157 chrX 84176652 84176773 -82473523 - RSINE1 SINE B4 -25 140 36 2 1227 202 65 125 42 chrX 84176817 84176865 -82473431 + (CATTT)n Simple_repeat Simple_repeat 2 53 0 2 1227 428 297 64 14 chrX 84176873 84177013 -82473283 + MER5A1 DNA MER1_type 20 166 0 2 1227 378 42 0 0 chrX 84177098 84177146 -82473150 + (TC)n Simple_repeat Simple_repeat 2 49 0 2 1227 279 0 0 0 chrX 84177146 84177176 -82473120 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 1227 216 0 0 0 chrX 84177552 84177576 -82472720 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1227 364 237 246 33 chrX 84177576 84177759 -82472537 + ID_B1 SINE B4 2 223 -1 2 1227 28 0 0 0 chrX 84178018 84178046 -82472250 + AT_rich Low_complexity Low_complexity 1 28 0 2 1227 29 60 0 0 chrX 84178147 84178197 -82472099 + AT_rich Low_complexity Low_complexity 1 50 0 2 1227 634 121 103 0 chrX 84179824 84179940 -82470356 + B2_Mm2 SINE B2 61 188 -7 2 1227 214 172 0 49 chrX 84181022 84181083 -82469213 + A-rich Low_complexity Low_complexity 2 59 0 2 1227 2097 262 177 33 chrX 84181113 84182312 -82467984 - Lx7 LINE L1 -374 7322 5952 2 1227 2380 179 77 8 chrX 84182315 84182832 -82467464 - RMER6C LTR ERVK 0 690 138 2 1227 38072 12 1 7 chrX 84182833 84188033 -82462263 + L1Md_A LINE L1 422 5586 -297 2 1227 8776 15 0 0 chrX 84188033 84189029 -82461267 + L1Md_A LINE L1 5587 6582 0 2 1227 746 196 20 26 chrX 84189029 84189181 -82461115 - RMER6C LTR ERVK -539 151 1 2 1227 268 239 30 0 chrX 84189186 84189253 -82461043 - Lx7 LINE L1 -1747 5949 5881 2 1227 690 188 50 50 chrX 84190322 84190462 -82459834 - B1_Mm SINE Alu -5 142 3 2 1227 601 264 35 7 chrX 84190552 84190693 -82459603 - B3 SINE B2 -8 208 64 2 1227 264 30 0 0 chrX 84190737 84190770 -82459526 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1227 383 134 0 12 chrX 84190770 84190853 -82459443 + (GA)n Simple_repeat Simple_repeat 2 83 0 2 1227 230 214 0 23 chrX 84190970 84191013 -82459283 - B3A SINE B2 -148 50 9 2 1227 306 0 0 0 chrX 84191345 84191379 -82458917 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 1227 435 19 0 0 chrX 84192615 84192667 -82457629 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 1227 378 281 0 37 chrX 84192698 84192805 -82457491 + MTEa LTR MaLR 1 103 -276 2 1227 864 160 89 0 chrX 84192803 84192972 -82457324 + URR1B DNA MER1_type 42 225 0 2 1227 800 238 144 21 chrX 84192972 84193239 -82457057 + MTEa LTR MaLR 84 373 -6 2 1227 1024 266 104 17 chrX 84194839 84195184 -82455112 - MTE2a LTR MaLR 0 379 5 2 1227 390 129 0 0 chrX 84195362 84195424 -82454872 + (GGA)n Simple_repeat Simple_repeat 3 64 0 2 1227 934 240 72 88 chrX 84195424 84195831 -82454465 + L1MB7 LINE L1 5573 5991 -193 2 1227 387 292 54 21 chrX 84197427 84197575 -82452721 + B4 SINE B4 8 151 -141 2 1227 359 234 54 0 chrX 84197779 84197890 -82452406 - Lx9 LINE L1 0 7644 7528 2 1227 2419 226 96 27 chrX 84197880 84198517 -82451779 + Lx7 LINE L1 6648 7328 -368 2 1227 387 41 0 0 chrX 84198565 84198614 -82451682 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 1227 578 276 13 6 chrX 84198810 84198967 -82451329 - Lx9 LINE L1 -191 7453 7296 2 1227 588 29 0 0 chrX 84199695 84199765 -82450531 + (GA)n Simple_repeat Simple_repeat 1 70 0 2 1227 234 91 0 0 chrX 84200797 84200830 -82449466 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 2 1227 350 333 0 20 chrX 84202006 84202153 -82448143 + G-rich Low_complexity Low_complexity 1 144 0 2 1227 299 184 90 26 chrX 84202154 84202232 -82448064 + RLTR25B LTR ERVK 427 509 -519 2 1227 581 162 9 28 chrX 84202166 84202274 -82448022 + B1_Mus2 SINE Alu 42 147 0 2 1227 26 0 0 0 chrX 84203823 84203849 -82446447 + AT_rich Low_complexity Low_complexity 1 26 0 2 1227 353 306 76 65 chrX 84204004 84204189 -82446107 - MIR SINE MIR -46 222 36 2 1227 447 308 23 0 chrX 84205073 84205203 -82445093 - MER5A DNA MER1_type -14 175 43 2 1227 318 265 93 62 chrX 84205237 84205398 -82444898 - L1MD2 LINE L1 -5 6354 6189 2 1227 282 287 43 61 chrX 84205446 84205561 -82444735 + MER5B DNA MER1_type 1 113 -65 2 1227 287 113 16 0 chrX 84206169 84206231 -82444065 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 3 1227 276 306 7 34 chrX 84206498 84206647 -82443649 + CT-rich Low_complexity Low_complexity 6 150 0 3 1227 425 277 275 13 chrX 84206731 84206990 -82443306 - MTE2b LTR MaLR -19 360 4 3 1227 195 42 0 0 chrX 84207567 84207591 -82442705 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 1227 232 136 85 0 chrX 84207938 84207997 -82442299 + (CAAA)n Simple_repeat Simple_repeat 1 64 0 3 1227 3434 25 2 0 chrX 84208249 84208644 -82441652 + MTA_Mm LTR MaLR 1 396 0 3 1227 1666 207 25 84 chrX 84209933 84210375 -82439921 + RLTR42-int LTR ERVK 1106 1521 -4001 3 1227 355 202 19 0 chrX 84210554 84210658 -82439638 + (TA)n Simple_repeat Simple_repeat 2 107 0 3 1227 2729 182 12 2 chrX 84210844 84211350 -82438946 + Lx2B LINE L1 6478 6988 -12 3 1227 1070 142 15 45 chrX 84211783 84212028 -82438268 + RLTR42-int LTR ERVK 1916 2330 -3807 3 1227 228 196 43 0 chrX 84212075 84212121 -82438175 + URR1B DNA MER1_type 177 224 -1 3 1227 569 238 87 128 chrX 84212122 84212489 -82437807 + MYSERV6-int LTR ERVK 7153 7504 -1455 3 1227 307 240 34 135 chrX 84212605 84212783 -82437513 + RLTR42-int LTR ERVK 2861 3020 -3117 3 1227 22 35 0 0 chrX 84212958 84212987 -82437309 + AT_rich Low_complexity Low_complexity 1 29 0 3 1227 568 195 70 47 chrX 84213424 84213550 -82436746 + RLTR42-int LTR ERVK 3598 3721 -2416 3 1227 1287 191 25 114 chrX 84213550 84213814 -82436482 - RMER10B LTR ERVL 0 398 166 3 1227 1501 0 0 22 chrX 84213814 84213997 -82436299 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 3 1227 1287 191 25 114 chrX 84213997 84214169 -82436127 - RMER10B LTR ERVL -233 165 1 3 1227 568 195 70 47 chrX 84214169 84214214 -82436082 + RLTR42-int LTR ERVK 3722 3773 -2364 3 1227 237 288 41 54 chrX 84215405 84215552 -82434744 + RLTR23 LTR ERV1 286 430 0 3 1227 189 74 0 0 chrX 84215769 84215796 -82434500 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 1227 7320 75 6 5 chrX 84215872 84216892 -82433404 - L1Md_F2 LINE L1 -12 6570 5550 3 1227 262 136 6 0 chrX 84216892 84216948 -82433348 + MTD LTR MaLR 170 224 -172 3 1227 2467 75 0 25 chrX 84216955 84217309 -82432987 + L1Md_F2 LINE L1 6238 6582 0 3 1227 853 234 50 10 chrX 84217335 84217534 -82432762 + MTD LTR MaLR 213 419 0 3 1227 317 353 73 0 chrX 84217556 84217692 -82432604 + MLT1F2 LTR MaLR 351 496 -64 3 1227 270 0 0 0 chrX 84217720 84217750 -82432546 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 1227 189 0 0 0 chrX 84217850 84217871 -82432425 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1227 1145 188 5 33 chrX 84217904 84218118 -82432178 - Lx7 LINE L1 -1141 6555 6348 3 1227 1123 58 0 0 chrX 84218118 84218257 -82432039 + B1_Mus2 SINE Alu 1 139 -8 3 1227 499 169 0 12 chrX 84218283 84218367 -82431929 - Lx7 LINE L1 -1339 6357 6275 3 1227 2031 218 42 45 chrX 84218353 84218777 -82431519 + Lx7 LINE L1 6565 6996 -700 3 1227 6898 6 0 5 chrX 84218777 84219553 -82430743 + L1Md_T LINE L1 5811 6582 0 3 1227 2031 218 42 45 chrX 84219553 84219599 -82430697 + Lx7 LINE L1 6997 7034 -662 3 1227 224 77 26 0 chrX 84219599 84219638 -82430658 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 3 1227 334 236 0 73 chrX 84219642 84219738 -82430558 + Lx7 LINE L1 7024 7112 -584 3 1227 923 269 44 54 chrX 84219936 84220251 -82430045 + Lx7 LINE L1 7129 7440 -256 3 1227 1122 74 0 7 chrX 84220343 84220492 -82429804 + B1_Mus1 SINE Alu 1 148 0 3 1227 303 312 0 0 chrX 84222786 84222879 -82427417 + Lx9 LINE L1 6903 6995 -649 3 1227 21 82 0 0 chrX 84223761 84223810 -82426486 + AT_rich Low_complexity Low_complexity 1 49 0 3 1227 1914 157 281 2 chrX 84223812 84224285 -82426011 + RMER20B LTR ERVK 1 605 -22 3 1227 501 306 40 0 chrX 84224329 84224453 -82425843 - RSINE1 SINE B4 -25 140 12 3 1227 653 284 6 36 chrX 84224896 84225047 -82425249 + B3A SINE B2 1 149 -49 3 1227 690 75 0 0 chrX 84225047 84225140 -82425156 + (TC)n Simple_repeat Simple_repeat 1 93 0 3 1227 653 284 6 36 chrX 84225140 84225156 -82425140 + B3A SINE B2 150 163 -35 3 1227 21 0 0 0 chrX 84225516 84225537 -82424759 + AT_rich Low_complexity Low_complexity 1 21 0 3 1227 4115 240 31 57 chrX 84225678 84226761 -82423535 - RMER1B Other Other -4 1062 8 3 1227 307 303 114 27 chrX 84227274 84227423 -82422873 + RLTR24 LTR ERV1 1 162 -367 3 1227 374 263 90 0 chrX 84227525 84227658 -82422638 + RLTR24 LTR ERV1 385 529 0 3 1227 351 0 0 0 chrX 84227729 84227768 -82422528 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 3 1227 761 284 17 0 chrX 84227825 84228001 -82422295 - B3A SINE B2 -18 180 2 3 1227 604 263 22 0 chrX 84228030 84228167 -82422129 - RSINE1 SINE B4 -23 142 3 3 1227 183 360 56 11 chrX 84228456 84228546 -82421750 - L4 LINE RTE -687 1342 1249 3 1227 683 44 0 0 chrX 84228800 84228891 -82421405 - BC1_Mm scRNA scRNA -61 91 1 3 1227 22 56 0 0 chrX 84229152 84229188 -82421108 + AT_rich Low_complexity Low_complexity 1 36 0 3 1227 22 0 0 0 chrX 84229282 84229304 -82420992 + AT_rich Low_complexity Low_complexity 1 22 0 3 1227 458 266 86 0 chrX 84229669 84229797 -82420499 + B1F SINE Alu 4 142 -7 3 1227 348 111 0 0 chrX 84230021 84230075 -82420221 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1227 948 265 66 32 chrX 84231065 84231412 -82418884 - ORR1E LTR MaLR 0 359 1 3 1227 205 394 98 24 chrX 84231475 84231680 -82418616 - MIRm SINE MIR -40 228 11 3 1227 3011 112 57 0 chrX 84233931 84234405 -82415891 - L1_Mm LINE L1 -1658 4225 3725 3 1227 3907 78 25 2 chrX 84234406 84234936 -82415360 + L1_Mus2 LINE L1 6025 6566 0 3 1227 2116 178 43 5 chrX 84235105 84235477 -82414819 - ORR1B1 LTR MaLR -8 386 1 3 1227 21 89 0 0 chrX 84235702 84235758 -82414538 + AT_rich Low_complexity Low_complexity 1 56 0 3 1227 571 268 15 30 chrX 84235762 84235893 -82414403 + B1F SINE Alu 15 143 -6 3 1227 1623 240 30 19 chrX 84236148 84236518 -82413778 - MTEb LTR MaLR 0 379 6 3 1227 22 0 0 0 chrX 84236542 84236564 -82413732 + AT_rich Low_complexity Low_complexity 1 22 0 3 1227 477 90 0 0 chrX 84237808 84237875 -82412421 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 1227 375 23 0 0 chrX 84238069 84238113 -82412183 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1227 726 362 51 19 chrX 84238212 84238586 -82411710 + MLT1D LTR MaLR 120 505 0 3 1227 214 330 50 44 chrX 84240138 84240304 -82409992 - L2a LINE L2 -2 3424 3204 3 1227 791 249 86 20 chrX 84242292 84242489 -82407807 + B3 SINE B2 6 215 -1 3 1227 208 343 37 19 chrX 84242745 84242852 -82407444 + MIR3 SINE MIR 79 187 -21 3 1227 369 0 0 0 chrX 84242899 84242940 -82407356 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1227 288 111 0 0 chrX 84243014 84243068 -82407228 + (A)n Simple_repeat Simple_repeat 1 54 0 3 1227 219 69 0 0 chrX 84243224 84243253 -82407043 + (TCCC)n Simple_repeat Simple_repeat 4 32 0 3 1227 387 0 0 0 chrX 84244380 84244423 -82405873 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1227 907 133 85 17 chrX 84244871 84245047 -82405249 - L1_Mus3 LINE L1 -12 6626 6439 3 1227 302 292 50 30 chrX 84245345 84245444 -82404852 + MLT1H2 LTR MaLR 375 475 -14 3 1227 419 298 8 32 chrX 84245463 84245588 -82404708 + MIRb SINE MIR 107 228 -40 3 1227 248 0 31 0 chrX 84245867 84245899 -82404397 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1227 652 23 23 0 chrX 84247380 84247466 -82402830 + (GA)n Simple_repeat Simple_repeat 2 89 0 3 1227 22 56 0 0 chrX 84248094 84248130 -82402166 + AT_rich Low_complexity Low_complexity 1 36 0 3 1227 614 311 29 53 chrX 84248645 84248852 -82401444 + ORR1E LTR MaLR 97 298 -61 3 1227 701 43 11 0 chrX 84249249 84249342 -82400954 + (TG)n Simple_repeat Simple_repeat 2 95 0 3 1227 363 261 0 74 chrX 84249342 84249426 -82400870 - B4A SINE B4 -94 198 121 3 1227 290 270 122 11 chrX 84249464 84249554 -82400742 - MER44D DNA MER2_type -568 137 38 3 1227 1447 225 47 95 chrX 84249602 84249920 -82400376 + MTD LTR MaLR 18 337 -82 3 1227 368 38 0 36 chrX 84249920 84249975 -82400321 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 3 1227 1447 225 47 95 chrX 84249975 84250078 -82400218 + MTD LTR MaLR 338 419 0 3 1227 28 0 0 0 chrX 84250825 84250853 -82399443 + AT_rich Low_complexity Low_complexity 1 28 0 3 1227 663 199 226 6 chrX 84250853 84251030 -82399266 - B3 SINE B2 0 216 1 3 1227 451 335 68 6 chrX 84251655 84251832 -82398464 - MER58A DNA MER1_type -36 188 1 3 1227 194 174 0 21 chrX 84252186 84252233 -82398063 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1227 1689 198 52 16 chrX 84252289 84252658 -82397638 - ORR1C2 LTR MaLR -2 382 1 3 1227 280 349 38 70 chrX 84254140 84254297 -82395999 + MER5A DNA MER1_type 17 168 -21 3 1227 28 29 0 0 chrX 84255405 84255440 -82394856 + AT_rich Low_complexity Low_complexity 1 35 0 3 1227 274 345 34 17 chrX 84255895 84256013 -82394283 - MER5A DNA MER1_type 0 189 70 3 1227 207 25 24 48 chrX 84256239 84256281 -82394015 + (TTATA)n Simple_repeat Simple_repeat 5 45 0 3 1227 245 298 141 90 chrX 84256394 84256571 -82393725 + B2_Mm2 SINE B2 1 186 -9 3 1227 2272 86 3 3 chrX 84256604 84256918 -82393378 + L1Md_F2 LINE L1 6257 6570 -12 3 1227 366 23 0 0 chrX 84256950 84256993 -82393303 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1227 875 57 8 0 chrX 84256993 84257114 -82393182 + (GA)n Simple_repeat Simple_repeat 1 123 0 3 1227 566 254 34 0 chrX 84257114 84257232 -82393064 - RSINE1 SINE B4 -22 143 22 3 1227 408 246 195 0 chrX 84258441 84258559 -82391737 + B1_Mur1 SINE Alu 1 141 -8 3 1227 414 260 201 11 chrX 84258592 84258639 -82391657 + B3 SINE B2 1 64 -152 3 1227 324 0 0 0 chrX 84258639 84258675 -82391621 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 1227 414 260 201 11 chrX 84258675 84258806 -82391490 + B3 SINE B2 65 213 -3 3 1227 223 223 31 31 chrX 84258899 84258996 -82391300 + A-rich Low_complexity Low_complexity 3 99 0 3 1227 1333 214 3 53 chrX 84260026 84260366 -82389930 + Lx9 LINE L1 5463 5785 -62 3 1227 856 257 31 57 chrX 84260392 84260743 -82389553 - RLTR15 LTR ERVK -17 342 1 3 1227 4977 192 36 49 chrX 84260744 84261963 -82388333 - MYSERV6-int LTR ERVK 0 8959 7813 3 1227 323 372 18 60 chrX 84261974 84262191 -82388105 - RMER4A LTR ERVK -9 457 250 3 1227 1066 248 48 86 chrX 84262191 84262828 -82387468 - MYSERV6-int LTR ERVK -1557 769 256 3 1227 953 212 26 0 chrX 84262823 84263012 -82387284 - MYSERV6-int LTR ERVK -7516 1443 1250 3 1227 3875 220 82 21 chrX 84263012 84263408 -82386888 + Lx9 LINE L1 5860 6405 -1239 3 1227 216 0 0 0 chrX 84263408 84263432 -82386864 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 1227 3875 203 66 24 chrX 84263432 84264091 -82386205 + Lx9 LINE L1 6406 7068 -576 3 1227 4281 109 8 18 chrX 84264112 84264774 -82385522 + Lx LINE L1 5994 6648 -6 4 1227 384 351 23 18 chrX 84266745 84266916 -82383380 + Lx8 LINE L1 6925 7096 -377 4 1227 489 275 122 31 chrX 84267168 84267397 -82382899 + Lx8 LINE L1 7215 7464 -9 4 1227 189 393 33 46 chrX 84267546 84267698 -82382598 - L2b LINE L2 -45 3330 3181 4 1227 747 193 27 33 chrX 84267881 84268031 -82382265 + B1_Mur1 SINE Alu 1 149 0 4 1227 325 391 34 30 chrX 84268064 84268362 -82381934 - L2b LINE L2 -534 2885 2587 4 1227 622 113 0 19 chrX 84268460 84268568 -82381728 + (GGGA)n Simple_repeat Simple_repeat 3 108 0 4 1227 205 386 33 46 chrX 84268721 84268873 -82381423 - L2b LINE L2 -45 3330 3181 4 1227 24 0 0 0 chrX 84268948 84268972 -82381324 + AT_rich Low_complexity Low_complexity 1 24 0 4 1227 269 376 79 47 chrX 84269839 84270029 -82380267 + MER20 DNA MER1_type 2 197 -22 4 1227 1069 284 63 16 chrX 84270241 84270556 -82379740 + MTD LTR MaLR 76 405 -14 4 1227 213 304 0 0 chrX 84270699 84270755 -82379541 + MIR SINE MIR 204 259 -3 4 1227 701 346 97 3 chrX 84271040 84271339 -82378957 + MLT1A0 LTR MaLR 1 327 -38 4 1227 26 0 0 0 chrX 84271737 84271763 -82378533 + AT_rich Low_complexity Low_complexity 1 26 0 4 1227 689 308 74 13 chrX 84272114 84272344 -82377952 - ORR1E LTR MaLR 0 359 116 4 1227 21 57 0 0 chrX 84272772 84272807 -82377489 + AT_rich Low_complexity Low_complexity 1 35 0 4 1227 582 285 51 68 chrX 84273111 84273405 -82376891 + B4A SINE B4 4 292 0 4 1227 22 0 0 0 chrX 84274119 84274141 -82376155 + AT_rich Low_complexity Low_complexity 1 22 0 4 1227 1138 222 130 52 chrX 84274296 84274524 -82375772 + ORR1D1 LTR MaLR 1 228 -146 4 1227 207 0 0 0 chrX 84274524 84274547 -82375749 + (CCTG)n Simple_repeat Simple_repeat 4 26 0 4 1227 1138 222 130 52 chrX 84274547 84274665 -82375631 + ORR1D1 LTR MaLR 229 373 -1 4 1227 451 0 34 0 chrX 84274895 84274954 -82375342 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 1227 249 91 73 0 chrX 84275045 84275100 -82375196 + Lx LINE L1 6593 6651 -3 4 1227 261 0 0 0 chrX 84275382 84275411 -82374885 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 1227 252 200 0 0 chrX 84275538 84275603 -82374693 + (TA)n Simple_repeat Simple_repeat 1 65 0 4 1227 396 330 38 67 chrX 84275682 84275922 -82374374 + ORR1D2 LTR MaLR 138 370 0 4 1227 509 314 26 36 chrX 84275935 84276127 -82374169 + B4A SINE B4 103 292 0 4 1227 253 362 0 0 chrX 84276822 84276902 -82373394 - ID4 SINE ID -3 80 1 4 1227 932 337 28 22 chrX 84277762 84278117 -82372179 + MLT1A0 LTR MaLR 9 365 0 4 1228 210 37 0 0 chrX 84279340 84279367 -82370929 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 4 1228 287 325 70 9 chrX 84279380 84279495 -82370801 + B1F1 SINE Alu 12 133 -16 4 1228 195 69 0 0 chrX 84279539 84279568 -82370728 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 4 1228 371 304 8 10 chrX 84280263 84280398 -82369898 + PB1D10 SINE Alu 1 137 -12 4 1228 304 213 56 14 chrX 84280939 84281082 -82369214 + (TA)n Simple_repeat Simple_repeat 2 150 0 4 1228 351 105 0 0 chrX 84281118 84281175 -82369121 + (TA)n Simple_repeat Simple_repeat 1 57 0 4 1228 802 302 63 19 chrX 84281448 84281718 -82368578 + B4 SINE B4 1 282 -10 4 1228 307 372 53 44 chrX 84281997 84282315 -82367981 + L1M3e LINE L1 16 336 -6694 4 1228 327 270 9 43 chrX 84282315 84282431 -82367865 + GA-rich Low_complexity Low_complexity 2 113 0 4 1228 25 51 0 0 chrX 84282875 84282914 -82367382 + AT_rich Low_complexity Low_complexity 1 39 0 4 1228 714 176 73 0 chrX 84283337 84283473 -82366823 + B1_Mus1 SINE Alu 2 147 -1 4 1228 447 19 0 0 chrX 84283474 84283526 -82366770 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1228 282 197 38 8 chrX 84283530 84283663 -82366633 + (TA)n Simple_repeat Simple_repeat 2 138 0 4 1228 285 29 0 0 chrX 84283675 84283709 -82366587 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1228 617 0 14 0 chrX 84284046 84284119 -82366177 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 4 1228 718 207 207 0 chrX 84284122 84284301 -82365995 - B3 SINE B2 0 216 1 4 1228 24 67 0 0 chrX 84284530 84284575 -82365721 + AT_rich Low_complexity Low_complexity 1 45 0 4 1228 207 100 0 0 chrX 84285837 84285867 -82364429 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1228 336 48 0 0 chrX 84286132 84286174 -82364122 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 1228 200 330 50 8 chrX 84286413 84286532 -82363764 - MIR SINE MIR -2 260 137 4 1228 316 154 37 49 chrX 84286542 84286624 -82363672 - Lx8 LINE L1 -2 7471 7391 4 1228 1020 259 45 22 chrX 84286631 84286900 -82363396 + MTD LTR MaLR 144 418 -1 4 1228 988 199 193 20 chrX 84286900 84287183 -82363113 + MTD-int LTR MaLR 12 329 -929 4 1228 380 309 99 74 chrX 84288852 84289135 -82361161 - B4A SINE B4 -1 291 2 4 1228 252 0 0 0 chrX 84289428 84289456 -82360840 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 1228 35 24 0 0 chrX 84291137 84291179 -82359117 + AT_rich Low_complexity Low_complexity 1 42 0 4 1228 258 306 16 0 chrX 84291586 84291648 -82358648 - tRNA-Ala-GCY_ tRNA tRNA -11 64 2 4 1228 254 292 108 59 chrX 84293729 84293831 -82356465 + B3 SINE B2 66 172 -44 4 1228 267 331 25 12 chrX 84294342 84294504 -82355792 - RLTR42-int LTR ERVK -4122 1400 1237 4 1228 518 273 195 30 chrX 84295325 84295695 -82354601 - L1MA5 LINE L1 -405 5895 5465 4 1228 522 0 0 0 chrX 84295728 84295786 -82354510 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 1228 354 235 0 42 chrX 84297089 84297160 -82353136 - B1_Mus2 SINE Alu -5 142 75 4 1228 28 48 0 0 chrX 84298037 84298079 -82352217 + AT_rich Low_complexity Low_complexity 1 42 0 4 1228 908 309 24 38 chrX 84298087 84298376 -82351920 + B4A SINE B4 8 292 0 4 1228 282 56 0 0 chrX 84298418 84298454 -82351842 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1228 450 0 0 0 chrX 84298454 84298503 -82351793 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 1228 1095 41 0 7 chrX 84299316 84299462 -82350834 - L1Md_F2 LINE L1 -12 6570 6426 4 1228 302 328 135 41 chrX 84299502 84299747 -82350549 - L2a LINE L2 -82 3344 3077 4 1228 1071 85 0 7 chrX 84300118 84300260 -82350036 + B1_Mus2 SINE Alu 1 141 -6 4 1228 351 0 0 0 chrX 84300263 84300302 -82349994 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1228 5616 54 10 6 chrX 84300507 84301231 -82349065 + L1Md_F2 LINE L1 5856 6582 0 4 1228 6617 32 0 6 chrX 84301231 84302028 -82348268 - L1_Mm LINE L1 -907 4976 4184 4 1228 1839 19 0 0 chrX 84302022 84302231 -82348065 + L1Md_T LINE L1 5378 5586 -297 4 1228 8970 6 0 0 chrX 84302231 84303227 -82347069 + L1Md_T LINE L1 5587 6582 0 4 1228 657 328 32 29 chrX 84303341 84303447 -82346849 - B4A SINE B4 -5 287 179 4 1228 264 77 0 0 chrX 84303447 84303486 -82346810 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1228 657 328 32 29 chrX 84303486 84303658 -82346638 - B4A SINE B4 -114 178 9 4 1228 609 14 0 0 chrX 84303996 84304066 -82346230 + (GA)n Simple_repeat Simple_repeat 1 70 0 4 1228 234 0 0 0 chrX 84304416 84304442 -82345854 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 1228 29 78 0 0 chrX 84304539 84304603 -82345693 + AT_rich Low_complexity Low_complexity 1 64 0 4 1228 2106 217 77 25 chrX 84305438 84305869 -82344427 - Lx5 LINE L1 -5 7045 6593 4 1228 4151 102 2 7 chrX 84306626 84307245 -82343051 - L1_Mur1 LINE L1 -1176 4710 4095 4 1228 2743 166 10 2 chrX 84307245 84307728 -82342568 + Lx3B LINE L1 6484 6970 -3 4 1228 304 314 8 78 chrX 84307773 84307901 -82342395 - Lx8 LINE L1 -963 6510 6392 4 1228 183 80 0 0 chrX 84308051 84308076 -82342220 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1228 564 15 0 0 chrX 84308076 84308140 -82342156 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 1228 722 145 0 53 chrX 84308144 84308275 -82342021 - B1_Mur4 SINE Alu -22 128 5 4 1228 437 297 6 76 chrX 84308166 84308323 -82341973 - B4 SINE B4 -98 194 49 4 1228 429 248 174 0 chrX 84308308 84308417 -82341879 - B3 SINE B2 -88 128 1 4 1228 519 323 64 10 chrX 84309230 84309433 -82340863 + RMER15 LTR ERVL 347 560 -15 4 1228 357 174 0 0 chrX 84310238 84310307 -82339989 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 1228 21 0 0 0 chrX 84310307 84310328 -82339968 + AT_rich Low_complexity Low_complexity 1 21 0 4 1228 6063 65 13 0 chrX 84311877 84312647 -82337649 + L1_Mus1 LINE L1 5788 6567 0 4 1228 298 306 18 18 chrX 84312708 84312818 -82337478 - MER3 DNA MER1_type -88 121 12 4 1228 590 255 14 0 chrX 84313324 84313469 -82336827 + B1_Mur1 SINE Alu 2 148 -1 4 1228 811 314 24 30 chrX 84314278 84314610 -82335686 - L2 LINE L2 -820 2599 2270 4 1228 549 175 0 0 chrX 84314774 84314877 -82335419 + (TG)n Simple_repeat Simple_repeat 2 104 0 4 1228 205 0 114 0 chrX 84314877 84314912 -82335384 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 4 1228 1113 96 0 0 chrX 84315520 84315760 -82334536 + (TTC)n Simple_repeat Simple_repeat 1 240 0 4 1228 427 256 46 103 chrX 84315882 84316056 -82334240 + RSINE1 SINE B4 2 165 0 4 1228 922 73 0 26 chrX 84316063 84316218 -82334078 + (CAGAGA)n Simple_repeat Simple_repeat 6 156 0 4 1228 708 270 129 41 chrX 84317224 84317564 -82332732 - ORR1D2 LTR MaLR 0 370 1 4 1228 202 241 0 100 chrX 84317613 84317673 -82332623 - L2c LINE L2 -22 3365 3312 4 1228 318 106 0 0 chrX 84318998 84319045 -82331251 + (TTCTC)n Simple_repeat Simple_repeat 4 50 0 4 1228 523 216 105 63 chrX 84319048 84319191 -82331105 - B1_Mur4 SINE Alu 0 150 2 4 1228 1495 229 76 3 chrX 84319195 84319537 -82330759 - ORR1D1 LTR MaLR -7 367 1 4 1228 237 108 0 0 chrX 84319796 84319833 -82330463 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1228 22 35 0 0 chrX 84320261 84320290 -82330006 + AT_rich Low_complexity Low_complexity 1 29 0 4 1228 319 193 84 0 chrX 84320290 84320373 -82329923 - Lx9 LINE L1 -9 7635 7546 5 1228 607 325 91 62 chrX 84320634 84321087 -82329209 + MLT1C LTR MaLR 1 466 -1 5 1228 395 311 117 28 chrX 84321182 84321652 -82328644 - L1ME3A LINE L1 -68 6105 5594 5 1228 22 35 0 0 chrX 84322061 84322090 -82328206 + AT_rich Low_complexity Low_complexity 1 29 0 5 1228 333 47 0 0 chrX 84322891 84322934 -82327362 + (T)n Simple_repeat Simple_repeat 1 43 0 5 1228 37999 31 1 0 chrX 84323197 84330054 -82320242 - L1Md_T LINE L1 0 6585 1 5 1228 4536 241 122 21 chrX 84330772 84331883 -82318413 + Lx2 LINE L1 4081 5279 -601 5 1228 3688 117 32 7 chrX 84331883 84332453 -82317843 + Lx3A LINE L1 6390 6973 -8 5 1228 8213 160 45 10 chrX 84332453 84334044 -82316252 + Lx2 LINE L1 5280 6997 0 5 1228 339 216 70 58 chrX 84334043 84334157 -82316139 + Lx6 LINE L1 5910 6020 -1440 5 1228 2358 291 120 5 chrX 84334156 84335062 -82315234 + Lx6 LINE L1 6217 7434 -26 5 1228 937 207 11 16 chrX 84335119 84335301 -82314995 + ORR1D1 LTR MaLR 1 181 -193 5 1228 320 235 191 0 chrX 84335304 84335419 -82314877 - HAL1-3A_ME LINE L1 -747 2111 1975 5 1228 823 223 43 0 chrX 84335424 84335612 -82314684 + ORR1D1 LTR MaLR 177 372 -2 5 1228 4269 34 0 0 chrX 84335681 84336184 -82314112 - L1Md_T LINE L1 -1 6581 6079 5 1228 298 279 35 26 chrX 84336236 84336350 -82313946 + MLT1A1 LTR MaLR 290 404 -4 5 1228 261 95 0 0 chrX 84336375 84336417 -82313879 - MusHAL1 LINE L1 -2405 307 266 5 1228 6024 119 19 15 chrX 84336412 84337018 -82313278 + L1_Mus2 LINE L1 4936 5543 -340 5 1228 1506 124 8 4 chrX 84337018 84337253 -82313043 + L1_Mus2 LINE L1 6329 6564 -2 5 1228 6262 64 8 11 chrX 84337253 84338096 -82312200 + L1_Mus2 LINE L1 5544 6392 -174 5 1228 1317 101 9 50 chrX 84338098 84338317 -82311979 + MT2C_Mm LTR ERVL 1 210 -265 5 1228 434 179 0 0 chrX 84338388 84338472 -82311824 + Lx2 LINE L1 6562 6645 -352 5 1228 890 126 7 7 chrX 84338465 84338601 -82311695 + Lx2 LINE L1 6769 6904 -93 5 1228 1676 169 16 26 chrX 84338942 84339252 -82311044 + Lx3C LINE L1 6667 6973 -3 5 1228 384 22 0 0 chrX 84341766 84341811 -82308485 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 1228 353 344 33 2 chrX 84341950 84342085 -82308211 - B1F SINE Alu -7 142 7 5 1228 22 0 0 0 chrX 84342960 84342982 -82307314 + AT_rich Low_complexity Low_complexity 1 22 0 5 1228 1020 144 27 22 chrX 84343702 84343886 -82306410 + Lx2A1 LINE L1 6821 7005 -3 5 1228 256 300 65 74 chrX 84344097 84344205 -82306091 - PB1 SINE Alu -5 122 16 5 1228 536 281 81 5 chrX 84344530 84344727 -82305569 - B3 SINE B2 0 216 5 5 1228 1728 75 55 4 chrX 84345251 84345505 -82304791 - L1_Mus2 LINE L1 0 6566 6300 5 1228 615 167 81 0 chrX 84345508 84345621 -82304675 + B3 SINE B2 2 131 -67 5 1228 315 0 0 0 chrX 84345629 84345664 -82304632 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 1228 22 0 0 0 chrX 84345687 84345709 -82304587 + AT_rich Low_complexity Low_complexity 1 22 0 5 1228 306 273 11 33 chrX 84346091 84346182 -82304114 - L4 LINE RTE -146 1883 1795 5 1228 469 284 75 88 chrX 84346566 84346784 -82303512 + MLT1D LTR MaLR 13 224 -403 5 1228 388 319 64 12 chrX 84346821 84346992 -82303304 + MLT1D LTR MaLR 308 487 -18 5 1228 500 279 9 3 chrX 84347113 84347230 -82303066 + B3A SINE B2 75 188 -28 5 1228 468 362 54 0 chrX 84347716 84347865 -82302431 + ID_B1 SINE B4 11 167 -57 5 1228 1162 290 80 6 chrX 84348456 84348792 -82301504 + ORR1D2 LTR MaLR 5 365 -5 5 1228 903 36 0 0 chrX 84350237 84350348 -82299948 + (CATATA)n Simple_repeat Simple_repeat 1 111 0 5 1228 718 272 118 40 chrX 84352252 84352483 -82297813 - L1M2 LINE L1 -549 5742 5483 5 1228 216 0 0 0 chrX 84352483 84352507 -82297789 + (CAA)n Simple_repeat Simple_repeat 2 25 0 5 1228 718 272 118 40 chrX 84352507 84352650 -82297646 - L1M2 LINE L1 -809 5482 5339 5 1228 253 333 59 0 chrX 84352650 84352752 -82297544 + PB1D10 SINE Alu 3 110 -7 5 1228 718 272 63 83 chrX 84352752 84353050 -82297246 - L1M2 LINE L1 -953 5338 5040 5 1228 354 309 64 104 chrX 84353112 84353361 -82296935 + RMER2 LTR ERV1 329 567 0 5 1228 332 327 17 58 chrX 84353753 84353925 -82296371 + Charlie4z DNA MER1_type 2 166 -1 5 1228 2650 142 2 51 chrX 84354450 84354553 -82295743 - Lx LINE L1 0 6654 6560 5 1228 657 0 0 0 chrX 84354553 84354626 -82295670 + (TTC)n Simple_repeat Simple_repeat 3 75 0 5 1228 958 93 0 54 chrX 84354630 84354777 -82295519 - B1_Mus1 SINE Alu -8 140 2 5 1228 2650 142 2 51 chrX 84354777 84355135 -82295161 - Lx LINE L1 -95 6559 6211 5 1228 400 113 286 10 chrX 84355168 84355266 -82295030 - Lx LINE L1 -5 6649 6525 5 1228 1480 128 3 17 chrX 84355199 84355469 -82294827 + Lx LINE L1 5618 5887 -767 5 1228 288 286 51 51 chrX 84355605 84355723 -82294573 - B1F SINE Alu -1 148 31 5 1228 4897 176 3 31 chrX 84355863 84356784 -82293512 + Lx LINE L1 5754 6648 -6 5 1228 1404 250 86 12 chrX 84356883 84357304 -82292992 + RMER1C Other Other 890 1341 -1 5 1228 43 0 0 0 chrX 84359370 84359413 -82290883 + AT_rich Low_complexity Low_complexity 1 43 0 5 1228 22 0 0 0 chrX 84359458 84359480 -82290816 + AT_rich Low_complexity Low_complexity 1 22 0 5 1228 214 333 0 13 chrX 84359537 84359613 -82290683 + ID4_ SINE ID 8 82 -1 5 1228 229 355 20 54 chrX 84359699 84359848 -82290448 - Tigger15a DNA TcMar -406 309 166 5 1228 856 319 90 46 chrX 84360743 84361289 -82289007 + Charlie7 DNA MER1_type 1485 2054 -558 5 1228 1315 256 110 25 chrX 84361289 84361762 -82288534 - L1_Rod LINE L1 -6346 826 314 5 1228 2953 74 20 2 chrX 84361830 84362223 -82288073 - MTB LTR MaLR 0 400 1 5 1228 865 283 26 98 chrX 84362243 84362549 -82287747 + Lx9 LINE L1 6344 6627 -1017 5 1228 1130 280 71 48 chrX 84362627 84363107 -82287189 + Lx9 LINE L1 6980 7470 -174 5 1228 273 212 82 0 chrX 84363218 84363303 -82286993 - MER31-int LTR ERV1 -3795 1141 1050 5 1228 408 88 0 0 chrX 84363800 84363857 -82286439 + (TA)n Simple_repeat Simple_repeat 1 57 0 5 1228 252 283 35 70 chrX 84365504 84365618 -82284678 + L2a LINE L2 3312 3421 -5 5 1228 686 315 47 79 chrX 84366848 84367553 -82282743 + L1MB1 LINE L1 5408 6079 -89 5 1228 815 343 60 33 chrX 84367588 84368100 -82282196 - L2 LINE L2 -1208 2211 1686 5 1228 342 283 113 0 chrX 84369195 84369354 -82280942 - Lx9 LINE L1 -25 7619 7443 5 1228 658 281 62 23 chrX 84369850 84370169 -82280127 + L1MA4 LINE L1 5680 6012 -288 5 1228 500 111 12 0 chrX 84370209 84370290 -82280006 + (TA)n Simple_repeat Simple_repeat 2 83 0 5 1228 1877 197 62 12 chrX 84370532 84370933 -82279363 - MTC LTR MaLR 0 421 1 5 1228 7868 79 1 7 chrX 84372075 84373694 -82276602 + L1_Mus1 LINE L1 4963 6565 -2 5 1228 6438 14 0 0 chrX 84373800 84374528 -82275768 - L1Md_A LINE L1 0 6582 5855 5 1228 628 176 31 81 chrX 84375794 84376016 -82274280 + RMER17C LTR ERVK 65 275 -135 5 1228 1035 44 0 0 chrX 84376016 84376153 -82274143 + (CAAAC)n Simple_repeat Simple_repeat 2 138 0 5 1228 726 115 8 16 chrX 84376831 84376955 -82273341 + L1Md_F2 LINE L1 6436 6558 -24 5 1228 258 32 0 0 chrX 84376955 84376986 -82273310 + (TAA)n Simple_repeat Simple_repeat 3 33 0 5 1228 1038 285 64 23 chrX 84377043 84377309 -82272987 - MTE2b LTR MaLR -52 327 51 5 1228 695 34 11 0 chrX 84377350 84377439 -82272857 - B1_Mm SINE Alu 0 147 58 5 1228 337 372 107 37 chrX 84377494 84377765 -82272531 + MLT1H LTR MaLR 127 416 -133 5 1228 639 320 28 11 chrX 84377814 84377994 -82272302 - B4A SINE B4 -12 280 98 5 1228 1116 328 63 31 chrX 84378242 84378784 -82271512 + Lx8 LINE L1 6906 7464 -9 5 1228 21 36 0 0 chrX 84378790 84378818 -82271478 + AT_rich Low_complexity Low_complexity 1 28 0 5 1228 380 288 54 0 chrX 84379079 84379190 -82271106 - MIR SINE MIR -64 198 82 5 1228 306 354 41 7 chrX 84379411 84379556 -82270740 - MER5B DNA MER1_type -22 156 7 5 1228 3326 119 27 15 chrX 84380172 84380466 -82269830 + RMER17B LTR ERVK 1 300 -658 5 1228 306 0 0 0 chrX 84380466 84380500 -82269796 + (TC)n Simple_repeat Simple_repeat 2 35 0 5 1228 2398 96 33 8 chrX 84380503 84380871 -82269425 - L1_Mus3 LINE L1 -12 6626 6250 5 1228 3326 161 53 11 chrX 84380871 84381464 -82268832 + RMER17B LTR ERVK 301 949 -9 5 1228 180 200 0 0 chrX 84383044 84383084 -82267212 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 5 1228 459 87 0 0 chrX 84383092 84383161 -82267135 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 1228 5005 71 25 3 chrX 84383421 84384100 -82266196 + L1_Mus1 LINE L1 5874 6567 0 5 1228 614 305 112 33 chrX 84384382 84384687 -82265609 + MLT1A0 LTR MaLR 9 337 -28 5 1228 768 234 103 10 chrX 84384894 84385088 -82265208 + B3 SINE B2 1 212 -4 5 1228 387 0 0 0 chrX 84385132 84385175 -82265121 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 5 1228 234 311 117 43 chrX 84385199 84385293 -82265003 - PB1D10 SINE Alu -15 102 2 5 1228 4003 64 0 6 chrX 84386509 84387058 -82263238 + L1Md_F2 LINE L1 6050 6582 0 5 1228 329 282 0 37 chrX 84387058 84387139 -82263157 + ID_B1 SINE B4 144 221 -3 5 1228 369 0 0 0 chrX 84387219 84387260 -82263036 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1228 615 14 0 0 chrX 84387263 84387335 -82262961 + (GA)n Simple_repeat Simple_repeat 1 72 0 5 1228 5080 77 4 7 chrX 84387371 84388056 -82262240 + L1Md_F2 LINE L1 5888 6570 -12 5 1228 745 200 8 0 chrX 84388931 84389056 -82261240 + ETnERV2-int LTR ERVK 7070 7195 -211 5 1228 230 229 83 0 chrX 84390330 84390378 -82259918 + MTE2b LTR MaLR 26 77 -302 5 1228 879 253 5 43 chrX 84390422 84390608 -82259688 - B3 SINE B2 0 216 38 5 1228 535 101 34 45 chrX 84391513 84391689 -82258607 + (TCTA)n Simple_repeat Simple_repeat 4 177 0 5 1228 23 0 0 0 chrX 84392431 84392454 -82257842 + AT_rich Low_complexity Low_complexity 1 23 0 5 1228 309 293 36 12 chrX 84392668 84392751 -82257545 + PB1D7 SINE Alu 13 97 -23 5 1228 730 325 42 54 chrX 84392843 84393175 -82257121 + MLT1D LTR MaLR 178 505 0 6 1228 3232 51 0 5 chrX 84393313 84393726 -82256570 + L1Md_F2 LINE L1 6158 6568 -14 6 1228 1119 69 0 27 chrX 84394691 84394840 -82255456 + B1_Mus2 SINE Alu 2 146 -1 6 1228 255 93 0 0 chrX 84394845 84394888 -82255408 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 6 1228 1404 52 0 0 chrX 84396104 84396277 -82254019 - B2_Mm1t SINE B2 -19 174 2 6 1228 302 309 21 11 chrX 84396503 84396598 -82253698 + B4 SINE B4 6 101 -191 6 1228 316 325 81 70 chrX 84396602 84396873 -82253423 + Tigger7 DNA MER2_type 64 337 -2154 6 1228 201 237 0 0 chrX 84396891 84396950 -82253346 + (ATG)n Simple_repeat Simple_repeat 2 60 0 6 1228 280 250 0 45 chrX 84396966 84397033 -82253263 - ID2 SINE ID -14 69 6 6 1228 254 156 62 0 chrX 84397045 84397109 -82253187 + Tigger7 DNA MER2_type 2311 2378 -113 6 1228 610 324 21 31 chrX 84397160 84397351 -82252945 + B3 SINE B2 1 189 -27 6 1228 734 50 0 10 chrX 84397448 84397548 -82252748 + (TCTA)n Simple_repeat Simple_repeat 2 100 0 6 1228 206 394 88 25 chrX 84398783 84399179 -82251117 - L4 LINE RTE -393 1636 1216 6 1228 230 211 0 19 chrX 84399219 84399272 -82251024 - B3 SINE B2 -2 214 163 6 1228 229 236 35 35 chrX 84399271 84399328 -82250968 - B3A SINE B2 -139 59 3 6 1228 1635 249 43 5 chrX 84399513 84399928 -82250368 + Lx7 LINE L1 6065 6495 -1201 6 1228 370 252 19 9 chrX 84399985 84400093 -82250203 + Lx7 LINE L1 7341 7449 -247 6 1228 496 236 9 0 chrX 84400109 84400219 -82250077 + Lx6 LINE L1 6526 6636 -824 6 1228 2381 223 63 70 chrX 84400217 84400716 -82249580 + Lx7 LINE L1 6976 7457 -239 6 1228 318 50 0 0 chrX 84400716 84400756 -82249540 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1228 2381 223 63 70 chrX 84400756 84400955 -82249341 + Lx7 LINE L1 7458 7669 -27 6 1228 377 279 21 29 chrX 84401449 84401589 -82248707 + L1MCa LINE L1 517 655 -5390 6 1228 416 309 0 0 chrX 84401931 84402025 -82248271 + RSINE1 SINE B4 3 96 -69 6 1228 234 91 0 0 chrX 84402084 84402117 -82248179 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1228 423 0 0 0 chrX 84402142 84402189 -82248107 + (TA)n Simple_repeat Simple_repeat 1 47 0 6 1228 317 24 24 0 chrX 84402189 84402230 -82248066 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1228 383 279 130 42 chrX 84402231 84402470 -82247826 + L1MCa LINE L1 1153 1412 -5339 6 1228 26 0 0 0 chrX 84403128 84403154 -82247142 + AT_rich Low_complexity Low_complexity 1 26 0 6 1228 1462 284 66 82 chrX 84403177 84403511 -82246785 - L1MA6 LINE L1 -32 6268 5908 6 1228 261 83 0 0 chrX 84403511 84403547 -82246749 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1228 1462 284 66 82 chrX 84403547 84403606 -82246690 - L1MA6 LINE L1 -393 5907 5856 6 1228 1048 111 0 0 chrX 84403606 84403750 -82246546 + B1_Mus1 SINE Alu 5 148 0 6 1228 1462 280 72 71 chrX 84403750 84404447 -82245849 - L1MA6 LINE L1 -445 5855 5183 6 1228 264 203 0 48 chrX 84404485 84404547 -82245749 - PB1D7 SINE Alu -1 119 61 6 1228 423 269 47 18 chrX 84404553 84404723 -82245573 + L1MB3 LINE L1 5941 6115 -68 6 1228 204 167 24 0 chrX 84406073 84406115 -82244181 + (TTA)n Simple_repeat Simple_repeat 1 43 0 6 1228 361 330 53 0 chrX 84406124 84406218 -82244078 - PB1D10 SINE Alu -12 105 7 6 1228 1452 34 45 0 chrX 84406316 84406493 -82243803 + B2_Mm1a SINE B2 2 186 -7 6 1228 239 359 0 0 chrX 84406535 84406613 -82243683 - ID4_ SINE ID -2 81 4 6 1228 389 172 16 0 chrX 84406723 84406787 -82243509 - B3A SINE B2 -132 66 2 6 1228 25 0 0 0 chrX 84407246 84407271 -82243025 + AT_rich Low_complexity Low_complexity 1 25 0 6 1228 696 24 0 0 chrX 84407765 84407847 -82242449 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 6 1228 614 306 21 33 chrX 84407847 84408090 -82242206 - Lx6 LINE L1 -28 7432 7193 6 153 7478 70 2 6 chrX 84409210 84410829 -82239467 - L1Md_F2 LINE L1 0 6582 4971 6 1229 986 134 0 0 chrX 84410821 84410970 -82239326 + L1Md_F LINE L1 267 415 -6104 6 1229 345 47 0 0 chrX 84411402 84411445 -82238851 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 6 1229 268 373 6 78 chrX 84411530 84411696 -82238600 - MLT1B LTR MaLR -101 289 136 6 1229 675 273 21 21 chrX 84411751 84411942 -82238354 - B3A SINE B2 -6 192 2 6 1229 943 104 19 0 chrX 84412406 84412560 -82237736 + (TTTC)n Simple_repeat Simple_repeat 2 158 0 6 1229 2923 72 3 3 chrX 84412580 84412971 -82237325 - L1_Mus2 LINE L1 0 6566 6176 6 1229 726 44 0 0 chrX 84413919 84414009 -82236287 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 6 1229 865 179 0 0 chrX 84414016 84414150 -82236146 - B1_Mus2 SINE Alu -13 134 1 6 1229 872 78 0 0 chrX 84414866 84414982 -82235314 + B1_Mus1 SINE Alu 24 139 -9 6 1229 3113 124 151 29 chrX 84415720 84416335 -82233961 - RMER6C LTR ERVK 0 690 1 6 1229 22 88 0 0 chrX 84416624 84416681 -82233615 + AT_rich Low_complexity Low_complexity 1 57 0 6 1229 1806 185 21 3 chrX 84416921 84417246 -82233050 - RMER6D LTR ERVK 0 720 390 6 1229 507 299 36 38 chrX 84417864 84418311 -82231985 - RMER17C LTR ERVK -29 381 1 6 1229 2000 169 100 7 chrX 84418325 84418735 -82231561 + Lx2B LINE L1 6553 7000 0 6 1229 22 80 0 0 chrX 84419523 84419573 -82230723 + AT_rich Low_complexity Low_complexity 1 50 0 6 1229 577 256 50 89 chrX 84419607 84419809 -82230487 + B3A SINE B2 5 198 0 6 1229 22 0 0 0 chrX 84421164 84421186 -82229110 + AT_rich Low_complexity Low_complexity 1 22 0 6 1229 23 0 0 0 chrX 84421395 84421418 -82228878 + AT_rich Low_complexity Low_complexity 1 23 0 6 1229 847 326 7 11 chrX 84422033 84422315 -82227981 + B4A SINE B4 1 281 -11 6 1229 322 331 38 19 chrX 84424773 84424933 -82225363 + MER5A1 DNA MER1_type 1 163 -3 6 1229 298 286 44 0 chrX 84425034 84425125 -82225171 + L2a LINE L2 3332 3426 0 6 1229 3391 113 39 0 chrX 84426063 84426578 -82223718 - Lx3_Mus LINE L1 -8 7001 6467 6 1229 346 326 0 32 chrX 84426731 84426826 -82223470 - RSINE1 SINE B4 -72 93 2 6 1229 216 294 15 0 chrX 84426975 84427043 -82223253 - ID2 SINE ID 0 83 15 6 1229 21 57 0 0 chrX 84427215 84427250 -82223046 + AT_rich Low_complexity Low_complexity 1 35 0 6 1229 315 279 53 18 chrX 84427469 84427582 -82222714 + B1F SINE Alu 20 136 -13 6 1229 28 61 0 0 chrX 84428184 84428233 -82222063 + AT_rich Low_complexity Low_complexity 1 49 0 6 1229 1011 308 38 13 chrX 84428371 84428798 -82221498 - Lx7 LINE L1 -1616 6028 5600 6 1229 546 274 79 28 chrX 84428799 84429056 -82221240 + L1M2 LINE L1 4286 4581 -1562 6 1229 6131 58 1 16 chrX 84429056 84429872 -82220424 + L1Md_F2 LINE L1 5768 6571 -11 6 1229 532 318 66 50 chrX 84429872 84429915 -82220381 + L1M2 LINE L1 4553 4591 -1289 6 1229 255 93 0 0 chrX 84431330 84431373 -82218923 + (TAA)n Simple_repeat Simple_repeat 1 43 0 6 1229 22 56 0 0 chrX 84431544 84431580 -82218716 + AT_rich Low_complexity Low_complexity 1 36 0 6 1229 447 184 70 9 chrX 84431607 84431722 -82218574 - Lx9 LINE L1 -5 7639 7518 6 1229 205 255 0 0 chrX 84431729 84431776 -82218520 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1229 489 17 0 0 chrX 84431881 84431939 -82218357 + (TA)n Simple_repeat Simple_repeat 1 58 0 6 1229 264 77 0 0 chrX 84431939 84431978 -82218318 + (GA)n Simple_repeat Simple_repeat 1 39 0 6 1229 272 264 17 139 chrX 84431984 84432156 -82218140 - L1MA5 LINE L1 -1509 5964 5814 6 1229 1938 56 0 0 chrX 84432791 84433041 -82217255 + L1Md_A LINE L1 6333 6582 0 6 1229 3685 109 7 25 chrX 84433439 84434032 -82216264 - L1_Mus4 LINE L1 0 6636 6055 6 1229 585 165 0 0 chrX 84434187 84434308 -82215988 + GA-rich Low_complexity Low_complexity 2 122 0 6 1229 246 81 0 0 chrX 84435842 84435879 -82214417 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 6 1229 1666 325 62 26 chrX 84436215 84436271 -82214025 - Lx9 LINE L1 -153 7491 7418 6 1229 315 113 0 0 chrX 84436271 84436324 -82213972 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1229 1666 325 62 26 chrX 84436324 84437073 -82213223 - Lx9 LINE L1 -227 7417 6658 6 1229 608 107 10 0 chrX 84437817 84437920 -82212376 + (GGGA)n Simple_repeat Simple_repeat 3 106 0 6 1229 714 204 44 44 chrX 84438827 84438986 -82211310 - ORR1D2 LTR MaLR -40 330 172 6 1229 2837 229 57 71 chrX 84439075 84439897 -82210399 - ORR1D2-int LTR MaLR 0 1370 560 6 1229 22 35 0 0 chrX 84439937 84439966 -82210330 + AT_rich Low_complexity Low_complexity 1 29 0 6 1229 685 261 119 45 chrX 84439970 84440135 -82210161 - B3 SINE B2 0 216 31 6 1229 2005 56 14 21 chrX 84440135 84440425 -82209871 - L1Md_F2 LINE L1 -12 6570 6283 6 1229 685 261 119 45 chrX 84440425 84440460 -82209836 - B3 SINE B2 -186 30 1 6 1229 357 290 74 81 chrX 84440465 84440799 -82209497 + MTEb LTR MaLR 44 379 0 6 1229 483 18 0 0 chrX 84440868 84440924 -82209372 + (GA)n Simple_repeat Simple_repeat 2 57 0 6 1229 261 349 75 40 chrX 84442628 84442828 -82207468 - L2a LINE L2 0 3426 3220 6 1229 509 393 56 15 chrX 84443457 84443723 -82206573 - B4A SINE B4 -15 277 1 6 1229 319 271 62 39 chrX 84444010 84444241 -82206055 - L1MA9 LINE L1 -8 6304 6058 6 1229 1978 194 63 3 chrX 84444539 84444922 -82205374 - MTD LTR MaLR -8 411 6 6 1229 1629 55 0 18 chrX 84445070 84445293 -82205003 - L1Md_F2 LINE L1 -12 6570 6352 6 1229 3866 214 56 69 chrX 84445540 84446559 -82203737 + Lx4B LINE L1 5513 6573 -485 6 1229 525 89 13 0 chrX 84446559 84446638 -82203658 - B1_Mus1 SINE Alu -68 80 1 6 1229 3866 214 56 69 chrX 84446638 84446999 -82203297 + Lx4B LINE L1 6574 6950 -108 6 1229 282 312 0 0 chrX 84447425 84447502 -82202794 + MER5A1 DNA MER1_type 2 78 -88 6 1229 198 0 0 0 chrX 84447930 84447952 -82202344 + (TA)n Simple_repeat Simple_repeat 2 23 0 6 1229 187 288 45 0 chrX 84448349 84448380 -82201916 - MER5A DNA MER1_type -18 171 138 6 1229 953 17 9 0 chrX 84448380 84448495 -82201801 + (GAA)n Simple_repeat Simple_repeat 2 117 0 6 1229 187 288 45 0 chrX 84448495 84448529 -82201767 - MER5A DNA MER1_type -52 137 104 6 1229 304 260 26 0 chrX 84448585 84448662 -82201634 - MER5A1 DNA MER1_type 0 166 88 6 1229 554 273 97 11 chrX 84449133 84449174 -82201122 - B3 SINE B2 -14 202 162 6 1229 594 39 0 0 chrX 84449174 84449251 -82201045 + (TG)n Simple_repeat Simple_repeat 2 78 0 7 1229 554 273 97 11 chrX 84449251 84449394 -82200902 - B3 SINE B2 -55 161 4 6 1229 37 62 0 0 chrX 84450386 84450451 -82199845 + AT_rich Low_complexity Low_complexity 1 65 0 7 1229 1061 348 100 54 chrX 84450456 84451319 -82198977 - Lx7 LINE L1 -38 7435 6517 7 1229 1094 63 14 0 chrX 84451937 84452080 -82198216 + B1_Mus2 SINE Alu 3 147 0 7 1229 678 175 0 0 chrX 84453250 84453364 -82196932 + B3 SINE B2 1 114 -102 7 1229 27 81 0 0 chrX 84453398 84453460 -82196836 + AT_rich Low_complexity Low_complexity 1 62 0 7 1229 6670 68 12 9 chrX 84453531 84454415 -82195881 + L1_Mus1 LINE L1 5643 6529 -38 7 1229 336 325 121 42 chrX 84455054 84455385 -82194911 - L1MC4a LINE L1 -2007 5875 5519 7 1229 1113 193 106 11 chrX 84456001 84456327 -82193969 + Lx3C LINE L1 6609 6972 -4 7 1229 265 24 23 23 chrX 84456333 84456376 -82193920 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 7 1229 1135 270 99 3 chrX 84456663 84456975 -82193321 + MTE2b LTR MaLR 1 342 -37 7 1229 369 0 0 0 chrX 84456975 84457016 -82193280 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 7 1229 203 88 0 29 chrX 84457100 84457135 -82193161 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 7 1229 268 297 54 0 chrX 84457227 84457301 -82192995 + ID4_ SINE ID 3 80 -3 7 1229 244 352 140 19 chrX 84457521 84457735 -82192561 + MIRb SINE MIR 29 268 0 7 1229 22 70 0 0 chrX 84459115 84459158 -82191138 + AT_rich Low_complexity Low_complexity 1 43 0 7 1229 687 319 34 106 chrX 84461172 84461345 -82188951 + MLT1B LTR MaLR 33 191 -199 7 1229 300 174 0 0 chrX 84461345 84461414 -82188882 + Lx7 LINE L1 7610 7678 -18 7 1229 687 319 34 106 chrX 84461414 84461626 -82188670 + MLT1B LTR MaLR 192 390 0 7 1229 564 15 0 0 chrX 84461694 84461759 -82188537 + (TG)n Simple_repeat Simple_repeat 1 65 0 7 1229 444 273 0 18 chrX 84462434 84462546 -82187750 + B3A SINE B2 30 139 -59 7 1229 378 0 0 0 chrX 84462547 84462589 -82187707 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1229 26 0 0 0 chrX 84462934 84462960 -82187336 + AT_rich Low_complexity Low_complexity 1 26 0 7 1229 504 0 0 0 chrX 84462990 84463046 -82187250 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1229 5511 35 0 0 chrX 84464751 84465409 -82184887 - L1Md_T LINE L1 -3 6579 5922 7 1229 523 197 83 33 chrX 84465409 84465530 -82184766 - B1_Mus2 SINE Alu -15 132 6 7 1229 7204 115 16 53 chrX 84465594 84467660 -82182636 + Lx LINE L1 4654 6641 -13 7 1229 6505 6 0 0 chrX 84467659 84468392 -82181904 + L1Md_A LINE L1 4854 5586 -297 7 1229 8886 4 1 0 chrX 84468392 84469387 -82180909 + L1Md_A LINE L1 5587 6582 0 7 1229 367 285 40 26 chrX 84469478 84469713 -82180583 + L1MB8 LINE L1 5315 5543 -641 7 1229 345 357 65 41 chrX 84469824 84470236 -82180060 + L1MB8 LINE L1 5694 6115 -63 7 1229 6539 59 1 0 chrX 84471260 84472089 -82178207 - L1Md_F2 LINE L1 -13 6569 5740 7 1229 342 215 131 156 chrX 84472089 84472249 -82178047 - RLTR23 LTR ERV1 -50 380 225 7 1229 1735 240 78 12 chrX 84472633 84473144 -82177152 - Lx9 LINE L1 0 7644 7100 7 1229 34 0 0 0 chrX 84473219 84473253 -82177043 + AT_rich Low_complexity Low_complexity 1 34 0 7 1229 23 0 0 0 chrX 84473526 84473549 -82176747 + AT_rich Low_complexity Low_complexity 1 23 0 7 1229 831 275 5 0 chrX 84474016 84474223 -82176073 + B3 SINE B2 2 209 -7 7 1229 21 0 0 0 chrX 84474244 84474265 -82176031 + AT_rich Low_complexity Low_complexity 1 21 0 7 1229 245 245 74 19 chrX 84474444 84474552 -82175744 - MER53 DNA hAT -33 160 47 7 1229 4011 40 20 6 chrX 84474606 84475115 -82175181 - L1Md_F2 LINE L1 0 6582 6067 7 1229 23 33 0 0 chrX 84475883 84475913 -82174383 + AT_rich Low_complexity Low_complexity 1 30 0 7 1229 599 181 63 34 chrX 84477362 84477406 -82172890 + Lx9 LINE L1 7432 7475 -169 7 1229 294 73 0 0 chrX 84477406 84477447 -82172849 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 7 1229 599 181 63 34 chrX 84477447 84477608 -82172688 + Lx9 LINE L1 7476 7643 -1 7 1229 259 319 56 0 chrX 84477781 84477853 -82172443 - Cheshire DNA MER1_type -2164 256 181 7 1229 473 207 23 0 chrX 84477912 84477999 -82172297 - 4.5SRNA scRNA scRNA -1 93 5 7 1229 495 286 62 23 chrX 84478000 84478194 -82172102 + Lx4B LINE L1 6864 7050 -8 7 1229 2592 90 58 15 chrX 84478621 84479018 -82171278 + L1Md_F2 LINE L1 6167 6580 -2 7 1229 670 287 121 0 chrX 84479161 84479468 -82170828 - L1MA8 LINE L1 -54 6237 5894 7 1229 4003 148 27 17 chrX 84479571 84480320 -82169976 + RMER6A LTR ERVK 1 756 0 7 1229 398 122 0 26 chrX 84480769 84480845 -82169451 + (TCCC)n Simple_repeat Simple_repeat 3 76 0 7 1229 2397 266 117 46 chrX 84480891 84481753 -82168543 - Lx6 LINE L1 -16 7444 6522 7 1229 2532 218 82 11 chrX 84481763 84482512 -82167784 - Lx6 LINE L1 -1193 6267 5475 7 1229 21 36 0 0 chrX 84482624 84482652 -82167644 + AT_rich Low_complexity Low_complexity 1 28 0 7 1229 3453 180 19 46 chrX 84482926 84483682 -82166614 + L1_Mm LINE L1 4751 5485 -398 7 1229 741 51 8 8 chrX 84483759 84483877 -82166419 + L1Md_F2 LINE L1 6462 6579 -3 7 1229 243 308 27 36 chrX 84484231 84484342 -82165954 - L2a LINE L2 -2 3424 3315 7 1229 760 182 0 0 chrX 84485764 84485890 -82164406 - RLTR33 LTR ERVK 0 678 553 7 1229 2358 173 132 27 chrX 84485987 84486863 -82163433 + RLTR19-int LTR ERVK 3414 4381 -1756 7 1229 3793 165 35 18 chrX 84487499 84488165 -82162131 + RLTR33 LTR ERVK 1 677 -1 7 1229 21 57 0 0 chrX 84488801 84488836 -82161460 + AT_rich Low_complexity Low_complexity 1 35 0 7 1229 2717 160 120 36 chrX 84490010 84490645 -82159651 + RMER6C LTR ERVK 3 690 0 7 1229 739 184 20 33 chrX 84491836 84491988 -82158308 + B1_Mur4 SINE Alu 1 150 0 7 1229 703 179 14 14 chrX 84492034 84492181 -82158115 + URR1B DNA MER1_type 79 225 0 7 1229 462 18 0 0 chrX 84492731 84492786 -82157510 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1229 1520 205 13 3 chrX 84492804 84493102 -82157194 + ORR1A1 LTR MaLR 3 303 -43 7 1229 7294 78 6 9 chrX 84493102 84494101 -82156195 + L1Md_F2 LINE L1 4591 5586 -297 7 1229 7592 62 0 17 chrX 84494101 84495102 -82155194 + L1Md_F2 LINE L1 5587 6570 -12 7 1229 389 109 0 0 chrX 84495119 84495174 -82155122 + ORR1A1 LTR MaLR 272 326 0 7 1229 1271 336 22 21 chrX 84495180 84495757 -82154539 - Lx9 LINE L1 -202 7442 6865 7 1229 306 191 0 31 chrX 84495791 84495856 -82154440 + Lx9 LINE L1 5911 5973 -1671 7 1229 1156 90 27 27 chrX 84496122 84496305 -82153991 - B2_Mm2 SINE B2 -7 188 6 7 1229 292 208 13 13 chrX 84496426 84496504 -82153792 - Lx4A LINE L1 0 7058 6981 7 1229 360 263 0 0 chrX 84497144 84497258 -82153038 + (TATATG)n Simple_repeat Simple_repeat 3 116 0 7 1229 23 0 0 0 chrX 84497375 84497398 -82152898 + AT_rich Low_complexity Low_complexity 1 23 0 7 1229 240 307 93 93 chrX 84497921 84498061 -82152235 + MLT1H LTR MaLR 312 511 -38 7 1229 183 114 0 0 chrX 84498266 84498301 -82151995 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 7 1229 291 122 0 0 chrX 84498405 84498454 -82151842 + (TA)n Simple_repeat Simple_repeat 1 49 0 7 1229 696 248 83 15 chrX 84498472 84498677 -82151619 + ORR1B1 LTR MaLR 47 265 -129 7 1229 1892 122 4 0 chrX 84498677 84498956 -82151340 + Lx LINE L1 6196 6475 -179 7 1229 771 136 57 0 chrX 84498956 84499096 -82151200 + ORR1A4 LTR MaLR 182 329 0 7 1229 3643 164 34 10 chrX 84499096 84499778 -82150518 + ORR1A4-int LTR MaLR 1 698 -1265 7 1229 359 394 29 59 chrX 84500000 84500307 -82149989 - ORR1E LTR MaLR -28 331 34 1 1229 37675 15 2 8 chrX 84500462 84505681 -82144615 + L1Md_A LINE L1 403 5586 -297 2 1229 8912 5 0 0 chrX 84505681 84506677 -82143619 + L1Md_A LINE L1 5587 6582 0 2 1229 2571 14 0 0 chrX 84506677 84506971 -82143325 + L1Md_A LINE L1 5293 5586 -297 3 1229 8794 12 0 0 chrX 84506971 84507967 -82142329 + L1Md_A LINE L1 5587 6582 0 3 1229 261 325 107 62 chrX 84509795 84509972 -82140324 + LFSINE_Vert SINE SINE 18 202 -257 4 1229 2050 180 146 75 chrX 84510342 84510985 -82139311 + RMER6C LTR ERVK 2 690 0 5 1229 261 0 0 0 chrX 84511545 84511574 -82138722 + (TC)n Simple_repeat Simple_repeat 2 30 0 6 1229 276 102 0 0 chrX 84511574 84511622 -82138674 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1229 594 306 138 68 chrX 84512330 84512684 -82137612 + MTE2a LTR MaLR 1 379 0 8 1229 4361 206 86 55 chrX 84513407 84513680 -82136616 + RLTR13D5 LTR ERVK 1 273 -841 9 1229 3608 46 2 15 chrX 84513680 84514140 -82136156 + L1Md_F2 LINE L1 6129 6582 0 1 1229 4707 122 26 13 chrX 84514140 84514947 -82135349 + RLTR13D5 LTR ERVK 274 1114 0 9 1229 7710 163 41 41 chrX 84515257 84516762 -82133534 + Lx4A LINE L1 5519 7058 0 1 1229 260 49 49 0 chrX 84516764 84516805 -82133491 + (CAAAA)n Simple_repeat Simple_repeat 5 47 0 1 1229 802 308 99 52 chrX 84516984 84517672 -82132624 + L1MB7 LINE L1 5433 6156 -15 1 1229 246 159 0 45 chrX 84517788 84517854 -82132442 + A-rich Low_complexity Low_complexity 3 65 0 1 1229 22 0 0 0 chrX 84518263 84518285 -82132011 + AT_rich Low_complexity Low_complexity 1 22 0 1 1229 432 55 0 0 chrX 84518290 84518345 -82131951 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1229 469 252 179 7 chrX 84518349 84518489 -82131807 - B3A SINE B2 -32 166 3 1 1229 225 0 0 0 chrX 84518494 84518519 -82131777 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1 1229 1256 106 17 0 chrX 84518680 84518860 -82131436 + B2_Mm2 SINE B2 2 184 -11 1 1229 481 246 172 0 chrX 84519793 84519927 -82130369 - B3A SINE B2 -41 157 1 2 1229 225 127 35 35 chrX 84519989 84520046 -82130250 - L1_Mur3 LINE L1 -2129 3751 3695 2 1229 237 79 0 0 chrX 84521679 84521717 -82128579 - L1_Mus2 LINE L1 0 6566 6529 2 1229 238 114 0 0 chrX 84521937 84521972 -82128324 + MER5A1 DNA MER1_type 97 131 -35 2 1229 808 238 24 0 chrX 84521964 84522132 -82128164 + B3 SINE B2 42 213 -3 2 1229 375 336 29 22 chrX 84522125 84522262 -82128034 + RSINE1 SINE B4 27 164 -1 2 1229 21 0 0 0 chrX 84523185 84523206 -82127090 + AT_rich Low_complexity Low_complexity 1 21 0 2 1229 235 309 82 87 chrX 84524410 84524605 -82125691 + MIR SINE MIR 35 228 -34 2 1229 429 281 165 20 chrX 84524763 84524963 -82125333 + MER92B LTR ERV1 15 243 -393 2 1229 454 353 0 0 chrX 84525170 84525303 -82124993 + B1_Mur4 SINE Alu 10 142 -8 2 1229 409 291 135 43 chrX 84525469 84525699 -82124597 + MER92B LTR ERV1 357 607 -29 2 1229 483 33 0 0 chrX 84525719 84525780 -82124516 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 1229 26 0 0 0 chrX 84525917 84525943 -82124353 + AT_rich Low_complexity Low_complexity 1 26 0 3 1229 962 120 120 0 chrX 84526307 84526474 -82123822 - B2_Mm2 SINE B2 -4 191 5 3 1229 28 29 0 0 chrX 84527505 84527540 -82122756 + AT_rich Low_complexity Low_complexity 1 35 0 3 1229 21 0 0 0 chrX 84530279 84530300 -82119996 + AT_rich Low_complexity Low_complexity 1 21 0 3 1229 1508 264 48 59 chrX 84530998 84531453 -82118843 - Lx9 LINE L1 -731 6913 6464 3 1229 2017 231 109 22 chrX 84531452 84531880 -82118416 + Lx9 LINE L1 6911 7370 -274 3 1229 351 0 0 0 chrX 84531880 84531919 -82118377 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1229 2017 231 109 22 chrX 84531919 84532160 -82118136 + Lx9 LINE L1 7371 7638 -6 3 1229 554 262 70 37 chrX 84532982 84533242 -82117054 - L1MB4 LINE L1 -1 6179 5911 3 1229 1918 144 98 8 chrX 84533325 84533704 -82116592 + RLTR9F LTR ERVK 3 415 0 3 1229 260 246 0 0 chrX 84533785 84533854 -82116442 + Lx9 LINE L1 7389 7457 -187 3 1229 35 54 0 0 chrX 84533956 84534012 -82116284 + AT_rich Low_complexity Low_complexity 1 56 0 4 1229 727 259 0 0 chrX 84534283 84534442 -82115854 + Lx6 LINE L1 7042 7189 -271 4 1229 1071 173 16 0 chrX 84534442 84534627 -82115669 - B2_Mm2 SINE B2 -6 189 2 4 1229 261 0 0 0 chrX 84534649 84534678 -82115618 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1229 609 116 8 67 chrX 84534678 84534791 -82115505 - B1_Mm SINE Alu -8 139 33 4 1229 1131 240 19 8 chrX 84534793 84535057 -82115239 + Lx6 LINE L1 7179 7445 -15 4 1229 224 185 18 18 chrX 84535065 84535120 -82115176 + A-rich Low_complexity Low_complexity 3 57 0 4 1229 235 226 0 19 chrX 84535393 84535447 -82114849 - MER33 DNA MER1_type -221 103 51 4 1229 212 182 18 35 chrX 84535763 84535820 -82114476 + T-rich Low_complexity Low_complexity 3 58 0 4 1229 327 376 0 0 chrX 84535927 84536028 -82114268 - PB1D10 SINE Alu -10 107 7 4 1229 23 0 0 0 chrX 84536061 84536084 -82114212 + AT_rich Low_complexity Low_complexity 1 23 0 4 1229 433 279 16 16 chrX 84536504 84536649 -82113647 + MIR SINE MIR 16 160 -102 5 1229 3639 56 4 0 chrX 84536884 84537346 -82112950 + L1_Mus2 LINE L1 6102 6565 -1 5 1229 451 268 142 22 chrX 84537536 84537719 -82112577 + B3 SINE B2 5 209 -7 5 1229 241 158 35 17 chrX 84537869 84537927 -82112369 + (CAGAGA)n Simple_repeat Simple_repeat 6 64 0 5 1229 25 31 0 0 chrX 84539643 84539675 -82110621 + AT_rich Low_complexity Low_complexity 1 32 0 5 1229 222 171 0 0 chrX 84539952 84539993 -82110303 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1230 21 36 0 0 chrX 84541460 84541488 -82108808 + AT_rich Low_complexity Low_complexity 1 28 0 5 1230 211 205 0 0 chrX 84541816 84541855 -82108441 + A-rich Low_complexity Low_complexity 2 40 0 5 1230 407 232 21 14 chrX 84541995 84542112 -82108184 - ORR1E LTR MaLR 0 379 259 5 1230 1387 246 27 15 chrX 84542113 84542514 -82107782 + Lx9 LINE L1 7190 7595 -49 5 1230 648 38 0 0 chrX 84542518 84542597 -82107699 + (GA)n Simple_repeat Simple_repeat 2 80 0 6 1230 225 262 0 129 chrX 84542630 84542770 -82107526 + L1P5 LINE L1 5568 5689 -467 6 1230 1180 280 34 8 chrX 84542794 84543147 -82107149 - Lx6 LINE L1 -16 7444 7083 6 1230 402 216 0 0 chrX 84543189 84543277 -82107019 + L1MA4 LINE L1 5778 5865 -435 6 1230 2077 64 3 3 chrX 84543286 84543569 -82106727 + L1_Mus2 LINE L1 6283 6565 -1 6 1230 962 101 14 0 chrX 84545103 84545251 -82105045 + (TTTC)n Simple_repeat Simple_repeat 2 151 0 6 1230 1132 83 0 0 chrX 84545251 84545396 -82104900 - B1_Mm SINE Alu -2 145 1 6 1230 206 175 31 31 chrX 84546170 84546235 -82104061 + A-rich Low_complexity Low_complexity 2 66 0 6 1230 221 163 0 0 chrX 84546172 84546215 -82104081 + (CAAAC)n Simple_repeat Simple_repeat 2 44 0 6 1230 358 327 88 0 chrX 84546236 84546349 -82103947 - ID_B1 SINE B4 -17 207 85 6 1230 2246 134 39 0 chrX 84546575 84546934 -82103362 + Lx3A LINE L1 6596 6968 -13 7 1230 186 43 0 0 chrX 84546934 84546957 -82103339 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 7 1230 21 36 0 0 chrX 84547011 84547039 -82103257 + AT_rich Low_complexity Low_complexity 1 28 0 7 1230 610 314 56 21 chrX 84547499 84547877 -82102419 - L1_Rod LINE L1 -11 5836 5446 7 1230 908 53 8 0 chrX 84548532 84548663 -82101633 + (TCTA)n Simple_repeat Simple_repeat 1 132 0 7 1230 249 269 124 44 chrX 84548866 84548979 -82101317 + LTR83 LTR ERVL 565 686 -94 7 1230 529 321 71 0 chrX 84549758 84549954 -82100342 + B3 SINE B2 2 211 -5 7 1230 23 33 0 0 chrX 84550535 84550565 -82099731 + AT_rich Low_complexity Low_complexity 1 30 0 7 1230 3139 128 12 2 chrX 84552264 84552810 -82097486 + Lx LINE L1 6011 6653 -1 7 1230 733 307 41 73 chrX 84552924 84553430 -82096866 - L1_Rod LINE L1 -81 5799 5308 7 1230 477 114 0 22 chrX 84553430 84553520 -82096776 - L1Md_F2 LINE L1 -12 6570 6483 8 1230 688 332 56 64 chrX 84553520 84553616 -82096680 - L1_Rod LINE L1 -572 5308 5213 7 1230 6483 126 33 10 chrX 84553617 84554741 -82095555 + Lx LINE L1 5499 6648 -6 8 1230 1241 45 0 0 chrX 84554746 84554903 -82095393 - L1Md_F2 LINE L1 -585 5981 5825 8 1230 4183 88 12 13 chrX 84554903 84555501 -82094795 + L1Md_F2 LINE L1 5984 6580 -2 8 1230 32 57 0 0 chrX 84556718 84556771 -82093525 + AT_rich Low_complexity Low_complexity 1 53 0 8 1230 24 53 0 0 chrX 84556905 84556943 -82093353 + AT_rich Low_complexity Low_complexity 1 38 0 8 1230 320 363 26 33 chrX 84557884 84557911 -82092385 - RSINE1 SINE B4 -10 155 125 8 1230 333 68 0 0 chrX 84557911 84557955 -82092341 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 1230 320 363 26 33 chrX 84557955 84558078 -82092218 - RSINE1 SINE B4 -41 124 6 8 1230 727 138 26 7 chrX 84558269 84558422 -82091874 + GA-rich Low_complexity Low_complexity 1 156 0 8 1230 23 54 0 0 chrX 84558884 84558921 -82091375 + AT_rich Low_complexity Low_complexity 1 37 0 8 1230 261 0 0 0 chrX 84559270 84559299 -82090997 + (T)n Simple_repeat Simple_repeat 1 29 0 8 1230 370 234 160 8 chrX 84559321 84559446 -82090850 - L1MB5 LINE L1 -203 5971 5828 9 1230 375 121 0 0 chrX 84560713 84560771 -82089525 + (TA)n Simple_repeat Simple_repeat 1 58 0 9 1230 1011 258 63 7 chrX 84560867 84561168 -82089128 - Lx7 LINE L1 -1790 5906 5589 9 1230 265 105 0 26 chrX 84561189 84561228 -82089068 + Lx8 LINE L1 6375 6412 -1061 9 1230 4901 201 42 19 chrX 84561711 84562836 -82087460 - Lx7 LINE L1 0 5880 4730 9 1230 3031 226 52 7 chrX 84562834 84563529 -82086767 + Lx7 LINE L1 5881 6606 -1090 9 1230 393 307 7 0 chrX 84563617 84563641 -82086655 + Lx7 LINE L1 7530 7554 -142 9 1230 264 122 0 0 chrX 84563641 84563682 -82086614 + (CAT)n Simple_repeat Simple_repeat 2 42 0 9 1230 393 307 7 0 chrX 84563682 84563794 -82086502 + Lx7 LINE L1 7555 7666 -30 9 1230 559 256 23 119 chrX 84563834 84564011 -82086285 + B3 SINE B2 27 186 -9 9 1230 25 0 0 0 chrX 84565313 84565338 -82084958 + AT_rich Low_complexity Low_complexity 1 25 0 9 1230 210 365 34 45 chrX 84566809 84566898 -82083398 + PB1D9 SINE Alu 27 114 -6 9 1230 358 321 115 21 chrX 84567673 84567864 -82082432 + MLT1A1 LTR MaLR 1 209 -199 1 1230 23 33 0 0 chrX 84569480 84569510 -82080786 + AT_rich Low_complexity Low_complexity 1 30 0 1 1230 588 230 154 22 chrX 84569591 84569773 -82080523 + B3 SINE B2 3 208 -8 1 1230 5974 143 18 188 chrX 84570323 84570637 -82079659 + Lx4B LINE L1 5507 5759 -118 1 1230 549 0 0 0 chrX 84570637 84570698 -82079598 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 1230 5974 168 87 78 chrX 84570698 84571916 -82078380 + Lx4B LINE L1 5757 7058 0 1 1230 23 33 0 0 chrX 84571962 84571992 -82078304 + AT_rich Low_complexity Low_complexity 1 30 0 1 1230 27 62 0 0 chrX 84572513 84572561 -82077735 + AT_rich Low_complexity Low_complexity 1 48 0 1 1230 23 54 0 0 chrX 84572619 84572656 -82077640 + AT_rich Low_complexity Low_complexity 1 37 0 1 1230 310 281 22 79 chrX 84573431 84573570 -82076726 + MIR SINE MIR 53 183 -79 1 1230 183 42 0 0 chrX 84573834 84573858 -82076438 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 1230 1239 103 16 26 chrX 84574370 84574559 -82075737 - B2_Mm2 SINE B2 -3 192 6 1 1230 621 0 0 0 chrX 84574583 84574652 -82075644 + (GTTTG)n Simple_repeat Simple_repeat 2 70 0 1 1230 1060 103 0 7 chrX 84574652 84574791 -82075505 - B1_Mus1 SINE Alu -8 140 2 1 1230 246 95 0 0 chrX 84574963 84575005 -82075291 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1230 21 57 0 0 chrX 84575807 84575842 -82074454 + AT_rich Low_complexity Low_complexity 1 35 0 1 1230 338 200 14 0 chrX 84576019 84576089 -82074207 + LTR48 LTR ERV1 15 85 -702 1 1230 4158 61 11 20 chrX 84576107 84576663 -82073633 + L1Md_F2 LINE L1 6032 6582 0 1 1230 239 0 32 0 chrX 84576851 84576882 -82073414 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 1230 483 18 0 0 chrX 84576882 84576937 -82073359 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1230 248 283 75 75 chrX 84576940 84577047 -82073249 + Lx8 LINE L1 6198 6304 -1169 1 1230 2562 309 62 14 chrX 84577072 84578067 -82072229 + Lx8 LINE L1 6400 7442 -31 1 1230 277 282 59 0 chrX 84578492 84578577 -82071719 + MER34A LTR ERV1 12 101 -470 1 1230 3466 20 2 0 chrX 84578734 84579129 -82071167 + MTA_Mm LTR MaLR 1 396 0 1 1230 219 88 0 0 chrX 84579333 84579367 -82070929 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1230 750 78 0 0 chrX 84579367 84579468 -82070828 + (GA)n Simple_repeat Simple_repeat 1 102 0 1 1230 495 362 25 0 chrX 84579520 84579680 -82070616 - B4 SINE B4 -101 191 28 1 1230 31 88 0 0 chrX 84580313 84580393 -82069903 + AT_rich Low_complexity Low_complexity 1 80 0 1 1230 847 263 111 28 chrX 84580622 84581068 -82069228 + L1_Rod LINE L1 1 634 -6538 1 1230 2743 244 43 22 chrX 84581069 84581843 -82068453 + Lx9 LINE L1 6805 7594 -50 1 1230 249 221 43 85 chrX 84582255 84582349 -82067947 + Lx9 LINE L1 5130 5219 -628 1 1230 2028 307 94 64 chrX 84582498 84582581 -82067715 + Lx9 LINE L1 6156 6240 -1404 1 1230 308 24 24 0 chrX 84582581 84582622 -82067674 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 1230 2028 307 94 64 chrX 84582622 84582877 -82067419 + Lx9 LINE L1 6241 6477 -1167 1 1230 5336 40 0 11 chrX 84582877 84583534 -82066762 + L1Md_F2 LINE L1 5933 6582 0 1 1230 2028 307 94 64 chrX 84583534 84584118 -82066178 + Lx9 LINE L1 6478 7068 -576 1 1230 333 0 0 0 chrX 84584118 84584155 -82066141 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1230 2028 307 94 64 chrX 84584155 84584416 -82065880 + Lx9 LINE L1 7069 7375 -269 1 1230 1731 351 164 23 chrX 84584437 84585450 -82064846 + MTEb-int LTR MaLR 111 1266 -314 1 1230 315 303 85 110 chrX 84585445 84585645 -82064651 + MTEb-int LTR MaLR 1384 1578 -2 1 1230 715 308 82 106 chrX 84585725 84585900 -82064396 + MTEb LTR MaLR 9 165 -214 1 1230 678 243 219 6 chrX 84585900 84586078 -82064218 + B3 SINE B2 1 216 0 1 1230 715 308 82 106 chrX 84586078 84586243 -82064053 + MTEb LTR MaLR 166 341 -38 1 1230 366 107 0 0 chrX 84586363 84586419 -82063877 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 1230 2099 39 4 8 chrX 84586431 84586693 -82063603 - L1Md_F2 LINE L1 -15 6567 6307 1 1230 25070 86 3 10 chrX 84586693 84590849 -82059447 - L1Md_A LINE L1 -1326 4557 457 1 1230 1171 262 51 6 chrX 84590869 84591180 -82059116 + MTD LTR MaLR 1 325 -94 1 1230 1104 374 84 28 chrX 84591506 84592196 -82058100 + MTEa-int LTR MaLR 850 1578 -2 1 1230 483 306 26 59 chrX 84592204 84592357 -82057939 + MTEa LTR MaLR 6 153 -226 1 1230 315 367 32 47 chrX 84593013 84593290 -82057006 + L1MEd LINE L1 488 760 -5359 1 1230 912 313 5 0 chrX 84594253 84594470 -82055826 + B4A SINE B4 2 219 -73 1 1230 461 71 14 0 chrX 84594576 84594646 -82055650 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 1230 1828 217 94 20 chrX 84594740 84595186 -82055110 + RMER1C Other Other 835 1313 -29 1 1230 1047 221 0 124 chrX 84597629 84597695 -82052601 - URR1A DNA MER1_type 0 226 174 1 1230 1048 58 7 7 chrX 84597695 84597833 -82052463 - B1_Mm SINE Alu -9 138 1 1 1230 1047 221 0 124 chrX 84597833 84598024 -82052272 - URR1A DNA MER1_type -53 173 1 1 1230 370 239 45 0 chrX 84598024 84598107 -82052189 - ORR1C2 LTR MaLR -297 87 1 1 1230 366 23 0 0 chrX 84598379 84598422 -82051874 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1230 21 57 0 0 chrX 84598705 84598740 -82051556 + AT_rich Low_complexity Low_complexity 1 35 0 1 1230 21 0 0 0 chrX 84598819 84598840 -82051456 + AT_rich Low_complexity Low_complexity 1 21 0 1 1230 536 65 13 0 chrX 84599204 84599281 -82051015 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 1230 798 194 264 14 chrX 84599985 84600277 -82050019 - Lx9 LINE L1 -22 7622 7258 1 1230 23 33 0 0 chrX 84600857 84600887 -82049409 + AT_rich Low_complexity Low_complexity 1 30 0 1 1230 1340 70 5 0 chrX 84600929 84601115 -82049181 - L1Md_F2 LINE L1 -1 6581 6395 1 1230 6974 36 2 1 chrX 84601261 84602092 -82048204 - L1Md_F2 LINE L1 -15 6567 5736 1 1230 24 53 0 0 chrX 84603392 84603430 -82046866 + AT_rich Low_complexity Low_complexity 1 38 0 1 1230 284 361 27 20 chrX 84603453 84603600 -82046696 - MIR SINE MIR -39 223 76 1 1230 512 303 47 27 chrX 84603818 84603967 -82046329 + RSINE1 SINE B4 3 154 -11 1 1230 498 317 55 70 chrX 84604103 84604303 -82045993 - B3A SINE B2 -1 197 1 1 1230 299 307 71 28 chrX 84604369 84604510 -82045786 + LTR48 LTR ERV1 1 147 -640 1 1230 892 234 24 14 chrX 84604957 84605165 -82045131 - ORR1C2 LTR MaLR 0 384 175 1 1230 813 79 39 4 chrX 84605166 84605401 -82044895 + (GA)n Simple_repeat Simple_repeat 1 243 0 1 1230 554 202 17 50 chrX 84605406 84605526 -82044770 - ORR1C2 LTR MaLR -258 116 1 1 1230 749 262 84 0 chrX 84605660 84605851 -82044445 - B3 SINE B2 -3 213 7 1 1230 239 188 0 0 chrX 84605854 84605902 -82044394 + MTEb LTR MaLR 332 379 0 1 1230 649 259 71 25 chrX 84605907 84606105 -82044191 + MTEb-int LTR MaLR 2 208 -1372 1 1230 42 0 0 0 chrX 84606124 84606166 -82044130 + AT_rich Low_complexity Low_complexity 1 42 0 1 1230 1245 323 87 66 chrX 84606166 84607049 -82043247 + MTEb-int LTR MaLR 164 1169 -340 1 1230 1202 329 14 8 chrX 84607057 84607422 -82042874 - MTE2b LTR MaLR 0 379 13 1 1230 561 244 168 27 chrX 84607499 84607684 -82042612 + B3 SINE B2 2 212 -4 1 1230 298 348 59 0 chrX 84608133 84608252 -82042044 + MTD LTR MaLR 25 151 -268 1 1230 1415 204 86 12 chrX 84608252 84608590 -82041706 + RLTR17 LTR ERVK 1 363 -329 1 1230 38 39 0 0 chrX 84608648 84608700 -82041596 + AT_rich Low_complexity Low_complexity 1 52 0 1 1230 2031 102 3 3 chrX 84608764 84609060 -82041236 - L1_Mus4 LINE L1 -1 6635 6340 1 1230 1774 185 10 3 chrX 84609061 84609365 -82040931 + RLTR17 LTR ERVK 328 633 -59 1 1230 1684 158 12 25 chrX 84609389 84609708 -82040588 - Lx LINE L1 0 6654 6340 1 1230 278 257 25 66 chrX 84609976 84610097 -82040199 - B4A SINE B4 0 292 177 1 1230 862 198 0 11 chrX 84610232 84610411 -82039885 - Lx7 LINE L1 0 7696 7520 1 1230 225 0 0 0 chrX 84610424 84610449 -82039847 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1 1230 731 96 0 0 chrX 84610513 84610607 -82039689 - Lx3C LINE L1 -318 5568 5475 1 1230 8353 121 21 60 chrX 84610607 84612049 -82038247 + Lx3C LINE L1 5587 6973 -3 1 1230 999 272 29 4 chrX 84612079 84612319 -82037977 - Lx6 LINE L1 -318 7142 6897 1 1230 859 149 0 28 chrX 84612319 84612464 -82037832 + RMER6D LTR ERVK 1 141 -579 1 1230 967 253 5 5 chrX 84612464 84612686 -82037610 - Lx6 LINE L1 -773 6687 6466 1 1230 1779 202 136 59 chrX 84612770 84613343 -82036953 - Lx9 LINE L1 0 7644 7028 1 1230 2107 107 62 0 chrX 84613396 84613704 -82036592 + ORR1A2 LTR MaLR 1 327 0 1 1230 1045 91 21 0 chrX 84614141 84614284 -82036012 - B1_Mus1 SINE Alu -1 147 2 1 1230 2202 302 115 69 chrX 84614338 84615511 -82034785 + Lx8 LINE L1 6247 7473 0 1 1230 26 0 0 0 chrX 84615516 84615542 -82034754 + AT_rich Low_complexity Low_complexity 1 26 0 1 1230 231 114 0 0 chrX 84615719 84615754 -82034542 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1230 207 0 0 0 chrX 84615894 84615917 -82034379 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 1 1230 976 116 7 0 chrX 84615924 84616071 -82034225 - B1_Mus1 SINE Alu 0 148 1 1 1230 263 333 129 12 chrX 84616079 84616249 -82034047 - Lx8 LINE L1 -7 7466 7277 1 1230 2547 304 87 34 chrX 84616435 84617637 -82032659 + Lx8 LINE L1 6203 7468 -5 1 1230 1012 292 117 34 chrX 84618102 84619009 -82031287 - Lx8 LINE L1 -1109 6364 5356 1 1230 225 243 14 14 chrX 84619292 84619363 -82030933 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 1230 650 317 82 11 chrX 84620215 84620483 -82029813 + Lx8 LINE L1 6088 6374 -676 1 1230 2836 296 129 22 chrX 84620474 84622043 -82028253 + Lx8 LINE L1 6052 7432 -28 1 1230 558 236 0 6 chrX 84622502 84622668 -82027628 + Lx5 LINE L1 1350 1514 -4363 1 1230 400 99 14 14 chrX 84622681 84622753 -82027543 + (GGA)n Simple_repeat Simple_repeat 2 73 0 1 1230 1293 83 0 0 chrX 84622760 84622940 -82027356 + (GAA)n Simple_repeat Simple_repeat 1 180 0 1 1230 747 217 0 4 chrX 84622941 84623187 -82027109 + GA-rich Low_complexity Low_complexity 1 244 0 1 1230 1163 166 24 47 chrX 84623187 84623440 -82026856 + Lx5 LINE L1 1501 1747 -4139 1 1230 709 124 8 8 chrX 84623416 84623538 -82026758 + Lx5 LINE L1 3260 3381 -2496 1 1230 2812 121 35 2 chrX 84623541 84623998 -82026298 + L1_Mus4 LINE L1 5649 6120 -516 1 1230 756 101 7 35 chrX 84624001 84624145 -82026151 + Lx LINE L1 6510 6649 -5 1 1230 25 31 0 0 chrX 84624147 84624179 -82026117 + AT_rich Low_complexity Low_complexity 1 32 0 1 1230 10790 150 15 15 chrX 84624208 84625448 -82024848 + Lx5 LINE L1 3396 4634 -1243 1 1230 543 31 0 0 chrX 84625448 84625513 -82024783 + (AATAG)n Simple_repeat Simple_repeat 1 65 0 1 1230 10790 184 42 33 chrX 84625513 84626174 -82024122 + Lx5 LINE L1 4624 5319 -1731 1 1230 799 118 0 59 chrX 84626174 84626309 -82023987 + B1_Mus1 SINE Alu 2 128 -20 1 1230 10790 184 42 33 chrX 84626309 84627948 -82022348 + Lx5 LINE L1 5320 7048 -2 1 1230 389 143 16 23 chrX 84629443 84629572 -82020724 + T-rich Low_complexity Low_complexity 5 132 0 1 1230 1163 55 14 0 chrX 84629575 84629720 -82020576 - B1_Mus2 SINE Alu 0 147 1 1 1230 2310 77 96 6 chrX 84630231 84630586 -82019710 - MTB LTR MaLR -13 387 1 2 1230 699 113 48 28 chrX 84630586 84630718 -82019578 - MTB-int LTR MaLR 0 1098 963 2 1230 413 51 0 0 chrX 84630718 84630777 -82019519 - L1_Mus1 LINE L1 -1 6566 6508 2 1230 699 113 48 28 chrX 84630777 84630789 -82019507 - MTB-int LTR MaLR -136 962 951 2 1230 1863 95 0 0 chrX 84630790 84631043 -82019253 - Lx3B LINE L1 -520 6453 6201 2 1230 2904 51 48 0 chrX 84631043 84631415 -82018881 + RLTR10 LTR ERVK 1 390 0 2 1230 2777 145 43 19 chrX 84631417 84631930 -82018366 + Lx3B LINE L1 6446 6970 -3 2 1230 5525 154 62 25 chrX 84631958 84633015 -82017281 - MTB-int LTR MaLR -159 1099 3 2 1230 3161 68 2 2 chrX 84633015 84633415 -82016881 - MTB LTR MaLR 0 400 1 2 1230 195 42 0 0 chrX 84633452 84633476 -82016820 + (CCCCCA)n Simple_repeat Simple_repeat 2 25 0 2 1230 1821 75 0 23 chrX 84633783 84634043 -82016253 + L1Md_F2 LINE L1 6319 6572 -10 2 1230 1224 231 68 57 chrX 84634311 84634678 -82015618 + ORR1D1 LTR MaLR 3 373 -1 2 1230 536 170 9 0 chrX 84636026 84636132 -82014164 + (TA)n Simple_repeat Simple_repeat 1 107 0 2 1230 945 243 24 19 chrX 84636803 84637013 -82013283 - B3 SINE B2 -4 212 2 2 1230 22 0 0 0 chrX 84637071 84637093 -82013203 + AT_rich Low_complexity Low_complexity 1 22 0 2 1230 2108 42 8 4 chrX 84637134 84637398 -82012898 - L1Md_F3 LINE L1 -1 6583 6319 2 1230 479 16 32 0 chrX 84638814 84638877 -82011419 + (TTATA)n Simple_repeat Simple_repeat 3 67 0 2 1230 2371 105 11 11 chrX 84639117 84639482 -82010814 + L1_Mus3 LINE L1 6268 6632 -6 2 1230 839 308 56 3 chrX 84640251 84640557 -82009739 + MER67D LTR ERV1 150 471 -43 2 1230 471 313 52 62 chrX 84640992 84641186 -82009110 - B3 SINE B2 -23 193 2 2 1230 2790 42 0 0 chrX 84641935 84642272 -82008024 - L1_Mus1 LINE L1 -2 6565 6229 2 1230 700 287 16 11 chrX 84644852 84645035 -82005261 - B3A SINE B2 0 198 15 2 1230 391 271 0 40 chrX 84645043 84645143 -82005153 - PB1D10 SINE Alu 0 117 22 2 1230 21 57 0 0 chrX 84645314 84645349 -82004947 + AT_rich Low_complexity Low_complexity 1 35 0 2 1230 537 308 57 0 chrX 84645549 84645796 -82004500 - Charlie2a DNA MER1_type -1875 986 726 2 1230 424 311 242 7 chrX 84645817 84646102 -82004194 - Charlie2a DNA MER1_type -2438 423 72 2 1230 328 313 94 24 chrX 84647072 84647242 -82003054 + B3A SINE B2 1 182 -16 2 1230 32 0 0 0 chrX 84647761 84647793 -82002503 + AT_rich Low_complexity Low_complexity 1 32 0 2 1230 294 383 18 53 chrX 84648680 84648851 -82001445 + MLT1J LTR MaLR 113 277 -235 2 1230 457 259 166 11 chrX 84649013 84649200 -82001096 - B3 SINE B2 0 216 1 2 1230 536 298 16 92 chrX 84649206 84649240 -82001056 - B3A SINE B2 0 198 168 2 1230 623 94 10 0 chrX 84649240 84649336 -82000960 + (TG)n Simple_repeat Simple_repeat 2 98 0 2 1230 536 297 58 98 chrX 84649336 84649491 -82000805 - B3A SINE B2 -28 188 28 2 1230 6010 58 1 3 chrX 84649491 84650253 -82000043 - L1_Mus1 LINE L1 0 6567 5807 2 1230 505 297 58 98 chrX 84650253 84650286 -82000010 - B3 SINE B2 -182 34 2 2 1230 24 32 0 0 chrX 84650562 84650593 -81999703 + AT_rich Low_complexity Low_complexity 1 31 0 2 1230 240 35 0 0 chrX 84651233 84651262 -81999034 + (TTTTTA)n Simple_repeat Simple_repeat 1 29 0 2 1230 243 0 0 0 chrX 84651606 84651633 -81998663 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1230 378 347 38 52 chrX 84651825 84652035 -81998261 + MLT1F-int LTR MaLR 1045 1251 -238 2 1230 22 70 0 0 chrX 84652973 84653016 -81997280 + AT_rich Low_complexity Low_complexity 1 43 0 2 1230 404 296 57 26 chrX 84653155 84653411 -81996885 + L1MD1 LINE L1 4324 4585 -1561 2 1230 984 249 25 17 chrX 84653458 84653699 -81996597 - Lx5 LINE L1 -5 7045 6803 2 1230 30 45 0 0 chrX 84653978 84654022 -81996274 + AT_rich Low_complexity Low_complexity 1 44 0 2 1230 315 321 45 14 chrX 84654031 84654252 -81996044 + L1MD1 LINE L1 5096 5323 -823 2 1230 2110 97 15 36 chrX 84654283 84654615 -81995681 + L1Md_F2 LINE L1 6257 6581 -1 2 1230 325 275 18 8 chrX 84654638 84654780 -81995516 + L1MD1 LINE L1 5356 5501 -678 2 1230 1868 216 8 16 chrX 84654837 84655213 -81995083 + ORR1D1 LTR MaLR 1 373 -1 2 1230 255 308 152 11 chrX 84655349 84655441 -81994855 - PB1D10 SINE Alu -2 115 11 2 1230 571 305 127 12 chrX 84655464 84655893 -81994403 + L1MD1 LINE L1 5717 6189 -53 2 1230 3003 104 0 5 chrX 84656199 84656634 -81993662 - L1_Mus4 LINE L1 -7 6629 6197 2 1230 4585 130 12 31 chrX 84658245 84659017 -81991279 - Lx2B LINE L1 -14 6986 6230 2 1230 3839 159 23 15 chrX 84659014 84659969 -81990327 - Lx2B LINE L1 -947 6053 5095 2 1230 7523 100 11 5 chrX 84659993 84661675 -81988621 - L1_Mus3 LINE L1 -7 6631 4937 2 1230 3855 147 0 3 chrX 84661703 84662350 -81987946 + L1_Mur2 LINE L1 3587 4231 -1646 2 1230 888 169 0 0 chrX 84662352 84662500 -81987796 - Lx2B LINE L1 -770 5107 4960 2 1230 6135 142 46 8 chrX 84662509 84663595 -81986701 + L1_Mur2 LINE L1 3420 4546 -1331 2 1230 423 0 0 0 chrX 84663687 84663734 -81986562 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 1230 217 340 68 29 chrX 84664703 84664806 -81985490 - L2a LINE L2 0 3426 3320 2 1230 4058 149 20 23 chrX 84664947 84665647 -81984649 - Lx4A LINE L1 -247 6811 6114 2 1230 239 315 22 11 chrX 84665753 84665843 -81984453 + LTR41 LTR ERVL 61 151 -617 2 1230 500 362 41 101 chrX 84665948 84666225 -81984071 + LTR41 LTR ERVL 369 643 -125 2 1230 380 348 50 81 chrX 84666225 84666607 -81983689 + MLT1A LTR MaLR 1 370 -4 2 1230 500 362 41 101 chrX 84666607 84666744 -81983552 + LTR41 LTR ERVL 644 758 -10 2 1230 307 291 136 8 chrX 84668256 84668374 -81981922 + B1F1 SINE Alu 2 134 -15 2 1230 475 352 69 9 chrX 84671039 84671257 -81979039 - Lx8 LINE L1 -148 7325 7095 2 1230 360 0 0 0 chrX 84671399 84671439 -81978857 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 153 870 263 40 0 chrX 84672297 84672548 -81977748 + L1_Mur3 LINE L1 129 389 -7339 2 1231 4796 172 43 53 chrX 84672598 84673734 -81976562 + L1_Mur3 LINE L1 3656 4780 -1100 2 1231 881 289 62 0 chrX 84673724 84673966 -81976330 + Lx6 LINE L1 6082 6338 -1122 2 1231 17982 3 0 0 chrX 84674144 84676168 -81974128 + L1Md_A LINE L1 3563 5586 -297 2 1231 8986 1 0 0 chrX 84676168 84677164 -81973132 + L1Md_A LINE L1 5587 6582 0 2 1231 519 353 31 10 chrX 84677281 84677473 -81972823 - MLT1C LTR MaLR 0 467 272 2 1231 636 362 85 11 chrX 84677462 84677744 -81972552 - MTE2b LTR MaLR -76 303 1 2 1231 199 54 54 0 chrX 84678278 84678315 -81971981 + (TAAAAA)n Simple_repeat Simple_repeat 2 40 0 2 1231 958 80 51 0 chrX 84680357 84680494 -81969802 + B1_Mm SINE Alu 4 147 0 2 1231 257 140 0 17 chrX 84680497 84680555 -81969741 + GA-rich Low_complexity Low_complexity 2 58 0 2 1231 267 370 63 0 chrX 84680741 84680868 -81969428 - L2 LINE L2 -563 2856 2722 2 1231 213 178 0 0 chrX 84682422 84682467 -81967829 + (CAAG)n Simple_repeat Simple_repeat 2 46 0 2 1231 227 320 13 0 chrX 84682957 84683035 -81967261 - ID4_ SINE ID -3 80 2 2 1231 534 16 0 0 chrX 84684493 84684556 -81965740 + (TAGA)n Simple_repeat Simple_repeat 1 63 0 2 1231 676 74 19 0 chrX 84684573 84684681 -81965615 + (TA)n Simple_repeat Simple_repeat 1 110 0 2 1231 205 155 17 17 chrX 84685186 84685245 -81965051 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 1231 456 91 0 0 chrX 84685245 84685311 -81964985 + (TG)n Simple_repeat Simple_repeat 1 66 0 2 1231 1666 146 60 67 chrX 84685600 84685931 -81964365 + ORR1A4 LTR MaLR 1 329 0 2 1231 417 39 0 0 chrX 84686139 84686190 -81964106 + (TA)n Simple_repeat Simple_repeat 2 52 0 2 1231 2380 70 0 0 chrX 84686520 84686833 -81963463 + L1Md_F2 LINE L1 6270 6582 0 2 1231 1531 253 45 5 chrX 84687144 84687522 -81962774 + Lx6 LINE L1 7068 7460 0 2 1231 22 56 0 0 chrX 84687580 84687616 -81962680 + AT_rich Low_complexity Low_complexity 1 36 0 2 1231 26 0 0 0 chrX 84687652 84687678 -81962618 + AT_rich Low_complexity Low_complexity 1 26 0 2 1231 613 285 8 0 chrX 84688019 84688149 -81962147 - ID_B1 SINE B4 -7 217 87 2 1231 392 375 0 0 chrX 84688413 84688549 -81961747 + MTEa LTR MaLR 1 136 -243 2 1231 386 268 71 0 chrX 84688638 84688765 -81961531 + Lx7 LINE L1 7561 7696 0 2 1231 23 0 0 0 chrX 84689754 84689777 -81960519 + AT_rich Low_complexity Low_complexity 1 23 0 2 1231 3698 99 15 0 chrX 84690317 84690844 -81959452 + L1_Mus1 LINE L1 6033 6567 0 2 1231 465 19 0 0 chrX 84692396 84692450 -81957846 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 1231 263 202 95 0 chrX 84692984 84693068 -81957228 - RMER12 LTR ERVK -486 836 745 2 1231 389 275 50 0 chrX 84695330 84695450 -81954846 + RMER30 DNA MER1_type 1 126 -76 2 1231 5280 222 48 12 chrX 84695454 84696659 -81953637 + Lx5 LINE L1 5794 7042 -8 2 1231 474 207 79 26 chrX 84696669 84696783 -81953513 + Lx6 LINE L1 6979 7098 -362 2 1231 229 211 18 0 chrX 84696777 84696834 -81953462 + Lx5 LINE L1 6990 7047 -3 2 1231 22 56 0 0 chrX 84697322 84697358 -81952938 + AT_rich Low_complexity Low_complexity 1 36 0 2 1231 279 79 0 0 chrX 84697358 84697396 -81952900 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1231 25 31 0 0 chrX 84697457 84697489 -81952807 + AT_rich Low_complexity Low_complexity 1 32 0 2 1231 1988 224 2 5 chrX 84699078 84699499 -81950797 + MTC LTR MaLR 1 420 -1 2 1231 31 44 0 0 chrX 84700305 84700350 -81949946 + AT_rich Low_complexity Low_complexity 1 45 0 2 1231 261 357 0 48 chrX 84700434 84700537 -81949759 + RSINE1 SINE B4 48 145 -20 2 1231 597 64 0 0 chrX 84700855 84700933 -81949363 + (GAAA)n Simple_repeat Simple_repeat 2 79 0 2 1231 957 289 108 18 chrX 84700962 84701304 -81948992 + MTEa LTR MaLR 7 379 0 2 1231 312 271 23 23 chrX 84701365 84701497 -81948799 + Lx4B LINE L1 6919 7050 -8 2 1231 6705 85 4 8 chrX 84701807 84702740 -81947556 + L1Md_F2 LINE L1 5653 6582 0 2 1231 2119 239 73 31 chrX 84702765 84703340 -81946956 + Lx2B LINE L1 6391 6989 -11 2 1231 25 0 0 0 chrX 84703681 84703706 -81946590 + AT_rich Low_complexity Low_complexity 1 25 0 2 1231 23 33 0 0 chrX 84704003 84704033 -81946263 + AT_rich Low_complexity Low_complexity 1 30 0 2 1231 38867 55 1 23 chrX 84705377 84712055 -81938241 - L1Md_T LINE L1 0 6582 99 2 1231 23 33 0 0 chrX 84712503 84712533 -81937763 + AT_rich Low_complexity Low_complexity 1 30 0 2 1231 23 0 0 0 chrX 84712748 84712771 -81937525 + AT_rich Low_complexity Low_complexity 1 23 0 3 1231 2583 43 3 3 chrX 84713325 84713649 -81936647 - L1Md_F3 LINE L1 -14 6570 6247 3 1231 757 179 12 0 chrX 84714599 84714761 -81935535 + CT-rich Low_complexity Low_complexity 1 164 0 3 1231 350 220 10 0 chrX 84714784 84714884 -81935412 + CT-rich Low_complexity Low_complexity 6 106 0 3 1231 1067 134 0 6 chrX 84714903 84715010 -81935286 + (TTC)n Simple_repeat Simple_repeat 1 107 0 3 1231 1198 85 11 0 chrX 84715010 84715187 -81935109 + (TCC)n Simple_repeat Simple_repeat 2 180 0 3 1231 1067 134 0 6 chrX 84715187 84715259 -81935037 + (TTC)n Simple_repeat Simple_repeat 1 72 0 3 1231 3178 103 4 4 chrX 84715452 84715910 -81934386 + L1_Mus3 LINE L1 6172 6629 -9 3 1231 385 45 29 29 chrX 84716031 84716099 -81934197 + (CAAAAA)n Simple_repeat Simple_repeat 3 70 0 3 1231 1482 160 10 46 chrX 84716233 84716540 -81933756 - RMER1A Other Other -18 1012 717 3 1231 611 368 96 32 chrX 84716589 84717058 -81933238 - MLT1E1A LTR MaLR -162 518 20 3 1231 1326 223 3 7 chrX 84718103 84718401 -81931895 - L1_Mur3 LINE L1 -610 5270 4974 3 1231 653 236 14 0 chrX 84718460 84718604 -81931692 + B1F2 SINE Alu 3 148 -1 3 1231 364 357 17 62 chrX 84718680 84718859 -81931437 - MER5B DNA MER1_type -7 171 1 3 1231 189 327 58 0 chrX 84718928 84718980 -81931316 - MIR SINE MIR -116 92 38 3 1231 275 342 8 70 chrX 84719643 84719772 -81930524 + LFSINE_Vert SINE SINE 278 398 -61 3 1231 423 0 0 0 chrX 84719912 84719959 -81930337 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 1231 303 136 0 0 chrX 84721341 84721400 -81928896 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 1231 4581 56 0 0 chrX 84721502 84722072 -81928224 + L1Md_F3 LINE L1 5017 5586 -297 3 1231 8209 30 4 1 chrX 84722073 84723053 -81927243 + L1Md_F3 LINE L1 5588 6570 -14 3 1231 28 29 0 0 chrX 84723135 84723170 -81927126 + AT_rich Low_complexity Low_complexity 1 35 0 3 1231 2912 131 41 47 chrX 84723277 84723784 -81926512 + Lx3B LINE L1 6461 6964 -9 3 1231 423 0 0 0 chrX 84723784 84723831 -81926465 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 3 1231 5349 119 47 18 chrX 84723836 84725473 -81924823 + L1VL1 LINE L1 193 1870 -1828 3 1231 229 62 0 0 chrX 84725467 84725499 -81924797 + L1_Mm LINE L1 2713 2744 -3139 3 1231 22 35 0 0 chrX 84726286 84726315 -81923981 + AT_rich Low_complexity Low_complexity 1 29 0 3 1231 195 42 0 0 chrX 84726382 84726406 -81923890 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 3 1231 187 333 0 0 chrX 84727124 84727175 -81923121 + MER5A DNA MER1_type 14 64 -125 3 1231 1257 302 44 26 chrX 84727187 84727686 -81922610 + MER67D LTR ERV1 7 514 0 3 1231 3783 236 30 57 chrX 84728420 84729465 -81920831 - Lx2 LINE L1 0 6997 5981 3 1231 318 50 0 0 chrX 84729745 84729785 -81920511 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 1231 5135 29 2 5 chrX 84729785 84730399 -81919897 - L1Md_F3 LINE L1 -22 6562 5951 3 1231 2086 178 46 23 chrX 84730399 84730830 -81919466 - Lx4A LINE L1 -3 7055 6615 3 1231 595 309 0 46 chrX 84731018 84731191 -81919105 - RSINE1 SINE B4 0 165 1 3 1231 321 26 0 0 chrX 84731228 84731266 -81919030 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3 1231 845 60 9 0 chrX 84731815 84731931 -81918365 + (TTTTC)n Simple_repeat Simple_repeat 3 119 0 3 1231 207 0 0 0 chrX 84731932 84731955 -81918341 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1231 1002 74 7 0 chrX 84731955 84732090 -81918206 - B1_Mus2 SINE Alu -10 137 2 3 1231 313 337 118 30 chrX 84732424 84732532 -81917764 - Charlie4a DNA MER1_type -43 465 349 3 1231 1029 74 7 0 chrX 84732532 84732667 -81917629 + B1_Mus2 SINE Alu 2 137 -10 3 1231 221 0 0 33 chrX 84732667 84732697 -81917599 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1231 313 337 118 30 chrX 84732697 84732985 -81917311 - Charlie4a DNA MER1_type -160 348 34 3 1231 1413 252 31 31 chrX 84733625 84733707 -81916589 + Lx5 LINE L1 6684 6764 -286 3 1231 2138 39 3 53 chrX 84733707 84734006 -81916290 - L1_Mus1 LINE L1 -1 6566 6283 3 1231 1413 252 31 31 chrX 84734006 84734283 -81916013 + Lx5 LINE L1 6765 7043 -7 3 1231 271 131 0 16 chrX 84734544 84734606 -81915690 - Lx9 LINE L1 -7 7637 7577 3 1231 290 213 0 0 chrX 84734680 84734741 -81915555 + Lx9 LINE L1 7380 7440 -204 3 1231 369 310 20 34 chrX 84735017 84735164 -81915132 + RSINE1 SINE B4 3 147 -18 3 1231 998 48 0 0 chrX 84735254 84735380 -81914916 + B1_Mus2 SINE Alu 21 146 -1 3 1231 222 37 0 0 chrX 84735388 84735415 -81914881 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1231 533 165 8 0 chrX 84735820 84735941 -81914355 + (CA)n Simple_repeat Simple_repeat 1 122 0 3 1231 501 17 0 0 chrX 84737080 84737138 -81913158 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 1231 208 220 40 0 chrX 84738139 84738189 -81912107 + CT-rich Low_complexity Low_complexity 4 55 0 3 1231 204 40 0 0 chrX 84738189 84738214 -81912082 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1231 201 94 0 0 chrX 84738476 84738508 -81911788 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1231 757 313 53 18 chrX 84738837 84739120 -81911176 + Lx7 LINE L1 7059 7351 -345 3 1231 234 0 0 0 chrX 84739128 84739154 -81911142 + (TTTG)n Simple_repeat Simple_repeat 4 29 0 3 1231 210 204 41 0 chrX 84739174 84739223 -81911073 + T-rich Low_complexity Low_complexity 5 55 0 3 1231 26 64 0 0 chrX 84739315 84739362 -81910934 + AT_rich Low_complexity Low_complexity 1 47 0 3 1231 228 304 25 12 chrX 84739632 84739712 -81910584 + Charlie9 DNA MER1_type 20 100 -2657 3 1231 843 146 15 0 chrX 84740249 84740386 -81909910 + Lx2B LINE L1 6532 6670 -330 3 1231 1144 39 32 6 chrX 84740485 84740641 -81909655 - L1Md_F3 LINE L1 -1 6583 6424 3 1231 1514 304 98 22 chrX 84740648 84741240 -81909056 + Lx8 LINE L1 6828 7464 -9 3 1231 22 56 0 0 chrX 84742374 84742410 -81907886 + AT_rich Low_complexity Low_complexity 1 36 0 3 1231 846 30 0 0 chrX 84742665 84742766 -81907530 + (TC)n Simple_repeat Simple_repeat 2 102 0 3 1231 749 79 7 109 chrX 84742766 84742950 -81907346 - B1_Mus2 SINE Alu -10 139 1 3 1231 392 184 16 116 chrX 84742950 84742984 -81907312 - MT2B LTR ERVL -449 152 132 3 1231 22 56 0 0 chrX 84743215 84743251 -81907045 + AT_rich Low_complexity Low_complexity 1 36 0 3 1231 242 333 105 57 chrX 84743485 84743609 -81906687 - L2 LINE L2 -447 2972 2843 3 1231 261 0 0 0 chrX 84743613 84743642 -81906654 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1231 195 319 102 43 chrX 84743779 84744103 -81906193 - L2 LINE L2 -815 2604 2262 3 1231 4968 139 19 2 chrX 84744913 84745733 -81904563 - L1_Mus1 LINE L1 -489 5394 4561 3 1231 7739 68 3 3 chrX 84745732 84746920 -81903376 + L1_Mus1 LINE L1 5379 6567 0 3 1231 846 276 40 4 chrX 84748041 84748292 -81902004 + L1M5 LINE L1 5509 5768 -426 3 1231 35 0 0 0 chrX 84748592 84748627 -81901669 + AT_rich Low_complexity Low_complexity 1 35 0 3 1231 287 322 67 40 chrX 84750303 84750452 -81899844 - MIR SINE MIR -65 197 45 3 1231 180 0 0 0 chrX 84750817 84750837 -81899459 + (TA)n Simple_repeat Simple_repeat 1 20 0 3 1231 824 321 86 39 chrX 84750980 84751389 -81898907 + MER67D LTR ERV1 87 514 0 3 1231 733 97 8 0 chrX 84751504 84751628 -81898668 + L1_Mus2 LINE L1 6440 6564 -2 3 1231 24 67 0 0 chrX 84752175 84752220 -81898076 + AT_rich Low_complexity Low_complexity 1 45 0 3 1231 640 267 135 41 chrX 84753364 84753742 -81896554 + Lx9 LINE L1 7055 7468 -176 3 1231 216 111 0 0 chrX 84753743 84753779 -81896517 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1231 4961 235 42 4 chrX 84753901 84754992 -81895304 + Lx6 LINE L1 6325 7457 -3 3 1231 343 234 70 39 chrX 84755381 84755510 -81894786 + Lx4B LINE L1 6921 7053 -5 3 1231 3603 35 18 2 chrX 84755646 84756098 -81894198 - L1Md_F2 LINE L1 -4 6578 6120 3 1231 1074 75 7 0 chrX 84757021 84757167 -81893129 - B1_Mus1 SINE Alu 0 148 2 3 1231 184 77 51 0 chrX 84757176 84757215 -81893081 + (TTTTTG)n Simple_repeat Simple_repeat 3 43 0 3 1231 489 234 9 0 chrX 84757821 84757932 -81892364 - L1MD1 LINE L1 -11 6231 6120 3 1231 28 0 0 0 chrX 84758319 84758347 -81891949 + AT_rich Low_complexity Low_complexity 1 28 0 3 1231 24 32 0 0 chrX 84758376 84758407 -81891889 + AT_rich Low_complexity Low_complexity 1 31 0 3 1231 21 36 0 0 chrX 84758532 84758560 -81891736 + AT_rich Low_complexity Low_complexity 1 28 0 3 1231 38 68 0 0 chrX 84758654 84758727 -81891569 + AT_rich Low_complexity Low_complexity 1 73 0 3 1231 225 154 0 0 chrX 84760512 84760551 -81889745 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 1231 7774 143 23 9 chrX 84760692 84762010 -81888286 - Lx2 LINE L1 0 6997 5662 3 1231 2102 211 126 35 chrX 84762596 84763225 -81887071 - RMER6C LTR ERVK -4 686 1 3 1231 25 0 0 0 chrX 84763505 84763530 -81886766 + AT_rich Low_complexity Low_complexity 1 25 0 3 1231 180 0 0 0 chrX 84764178 84764198 -81886098 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 1231 1103 76 7 0 chrX 84764245 84764389 -81885907 + B1_Mus1 SINE Alu 4 148 0 3 1231 564 29 0 0 chrX 84765120 84765190 -81885106 + (TC)n Simple_repeat Simple_repeat 2 71 0 3 1231 330 119 203 0 chrX 84765698 84765757 -81884539 + tRNA-Arg-CGY_ tRNA tRNA 2 72 -4 3 1231 185 396 22 0 chrX 84765923 84766014 -81884282 - MIRm SINE MIR -128 148 56 3 1231 304 321 58 44 chrX 84766117 84766254 -81884042 - B3 SINE B2 0 216 78 3 1231 837 110 62 84 chrX 84766364 84766543 -81883753 - Lx4B LINE L1 -960 6098 5924 3 1231 580 128 43 0 chrX 84766559 84766653 -81883643 - Lx4B LINE L1 -330 5547 5450 3 1231 4092 154 12 6 chrX 84766653 84767321 -81882975 + Lx4A LINE L1 6116 6787 -271 3 1231 376 115 0 0 chrX 84767321 84767382 -81882914 + Lx4A LINE L1 6995 7055 -3 3 1231 22 0 0 0 chrX 84767382 84767404 -81882892 + AT_rich Low_complexity Low_complexity 1 22 0 3 1231 27 49 0 0 chrX 84767474 84767515 -81882781 + AT_rich Low_complexity Low_complexity 1 41 0 3 1231 38 39 0 0 chrX 84767929 84767981 -81882315 + AT_rich Low_complexity Low_complexity 1 52 0 4 1231 225 0 0 0 chrX 84768752 84768777 -81881519 + (TTTTTG)n Simple_repeat Simple_repeat 6 30 0 4 1231 1666 305 11 36 chrX 84768983 84769682 -81880614 + Lx6 LINE L1 6455 7444 -16 4 1231 249 351 70 25 chrX 84769702 84769933 -81880363 + LTR40a LTR ERVL 43 283 -179 4 1231 305 327 26 0 chrX 84769958 84770071 -81880225 + LTR40a LTR ERVL 404 519 0 4 1231 50 18 0 0 chrX 84770326 84770383 -81879913 + AT_rich Low_complexity Low_complexity 1 57 0 4 1231 226 410 40 6 chrX 84770466 84770640 -81879656 - MLT1D LTR MaLR -314 191 12 4 1231 1068 370 68 67 chrX 84771445 84772233 -81878063 - MER21B LTR ERV1 -63 800 12 4 1231 341 238 0 0 chrX 84772474 84772537 -81877759 + B3A SINE B2 5 67 -131 4 1231 1716 55 5 0 chrX 84772538 84772757 -81877539 - L1Md_T LINE L1 0 6582 6363 4 1231 423 0 0 0 chrX 84772757 84772804 -81877492 + L1Md_F3 LINE L1 6324 6370 -214 4 1231 233 271 0 157 chrX 84772812 84772882 -81877414 + B2_Mm1t SINE B2 67 125 -68 4 1231 189 0 0 0 chrX 84772887 84772908 -81877388 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 1231 32 43 0 0 chrX 84772928 84772974 -81877322 + AT_rich Low_complexity Low_complexity 1 46 0 4 1231 502 293 16 8 chrX 84773064 84773188 -81877108 - B3 SINE B2 -67 149 25 4 1231 180 77 0 0 chrX 84773435 84773461 -81876835 + (CACCAT)n Simple_repeat Simple_repeat 6 31 0 4 1231 223 322 43 11 chrX 84773497 84773591 -81876705 + MER5A DNA MER1_type 4 100 -89 4 1231 304 290 173 1 chrX 84773864 84774006 -81876290 - MLT1E2 LTR MaLR -463 164 3 4 1231 354 309 118 8 chrX 84775714 84775841 -81874455 - MER5A DNA MER1_type -48 141 1 4 1231 414 53 0 0 chrX 84775988 84776045 -81874251 + (TA)n Simple_repeat Simple_repeat 1 57 0 4 1231 21 0 0 0 chrX 84776045 84776066 -81874230 + AT_rich Low_complexity Low_complexity 1 21 0 4 1231 1409 62 17 0 chrX 84776302 84776479 -81873817 - B2_Mm2 SINE B2 -15 180 1 4 1231 26 50 0 0 chrX 84777054 84777094 -81873202 + AT_rich Low_complexity Low_complexity 1 40 0 4 1231 41 66 0 0 chrX 84777279 84777355 -81872941 + AT_rich Low_complexity Low_complexity 1 76 0 4 1231 207 0 0 0 chrX 84778563 84778586 -81871710 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1231 2813 94 19 0 chrX 84779750 84780163 -81870133 + BGLII LTR ERVK 1 421 0 4 1231 2683 182 85 45 chrX 84780315 84780630 -81869666 + RMER6C LTR ERVK 3 313 -377 4 1231 6728 101 65 12 chrX 84780630 84781578 -81868718 + Lx3_Mus LINE L1 5915 6871 -138 4 1231 189 0 0 0 chrX 84781578 84781599 -81868697 + (GGGTG)n Simple_repeat Simple_repeat 4 24 0 4 1231 6728 101 65 12 chrX 84781599 84781689 -81868607 + Lx3_Mus LINE L1 6872 7007 -2 4 1231 2683 182 85 45 chrX 84781689 84782035 -81868261 + RMER6C LTR ERVK 314 690 0 4 1231 588 232 51 0 chrX 84782485 84782623 -81867673 + Lx6 LINE L1 6985 7129 -331 4 1231 1216 263 90 12 chrX 84782661 84782996 -81867300 + Lx6 LINE L1 7076 7436 -24 4 1231 590 262 11 50 chrX 84784027 84784208 -81866088 + B3A SINE B2 25 198 0 4 1231 497 289 7 36 chrX 84784614 84784754 -81865542 + ORR1C2 LTR MaLR 52 187 -187 4 1231 248 53 26 0 chrX 84784754 84784792 -81865504 + (TC)n Simple_repeat Simple_repeat 1 39 0 4 1231 949 216 14 42 chrX 84784792 84784804 -81865492 + ORR1C2 LTR MaLR 174 185 -199 4 1231 450 53 0 0 chrX 84784804 84784861 -81865435 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 1231 354 45 0 0 chrX 84784861 84784904 -81865392 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1231 949 216 14 42 chrX 84784904 84785107 -81865189 + ORR1C2 LTR MaLR 186 383 -1 4 1231 216 389 46 13 chrX 84786043 84786194 -81864102 + L2 LINE L2 2621 2776 -643 4 1231 336 315 0 0 chrX 84786322 84786414 -81863882 + MER5A1 DNA MER1_type 3 94 -72 4 1231 22 88 0 0 chrX 84786486 84786543 -81863753 + AT_rich Low_complexity Low_complexity 1 57 0 4 1231 3044 86 0 5 chrX 84787397 84787818 -81862478 - L1_Mus2 LINE L1 0 6566 6148 4 1231 5013 81 15 2 chrX 84787818 84788821 -81861475 + L1_Mus2 LINE L1 5150 6158 -408 4 1231 3329 162 26 10 chrX 84788866 84789478 -81860818 - Lx2B LINE L1 -5 6995 6374 4 1231 422 362 15 23 chrX 84789783 84789916 -81860380 + RSINE1 SINE B4 4 135 -30 4 1231 278 98 20 0 chrX 84789924 84789975 -81860321 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1231 207 173 0 0 chrX 84789975 84790027 -81860269 + GA-rich Low_complexity Low_complexity 1 52 0 4 1231 1946 275 18 10 chrX 84790357 84790863 -81859433 + Lx6 LINE L1 6951 7460 0 4 1231 360 368 18 40 chrX 84791718 84791942 -81858354 - MIRb SINE MIR -2 266 48 4 1231 482 279 48 48 chrX 84791957 84792104 -81858192 + RSINE1 SINE B4 3 149 -16 4 1231 342 0 0 0 chrX 84792104 84792142 -81858154 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1231 307 264 11 33 chrX 84792214 84792304 -81857992 + Lx9 LINE L1 7259 7346 -298 4 1231 14487 45 13 1 chrX 84793101 84795594 -81854702 - L1Md_F2 LINE L1 -2 6580 4056 4 1231 25 51 0 0 chrX 84795822 84795861 -81854435 + AT_rich Low_complexity Low_complexity 1 39 0 4 1231 23 0 0 0 chrX 84796433 84796456 -81853840 + AT_rich Low_complexity Low_complexity 1 23 0 4 1231 393 22 0 0 chrX 84796753 84796799 -81853497 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1231 8945 3 0 0 chrX 84796825 84797993 -81852303 - L1Md_A LINE L1 0 6582 5415 4 1231 222 200 0 0 chrX 84799044 84799094 -81851202 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1231 2965 48 0 8 chrX 84800270 84800647 -81849649 + L1Md_F2 LINE L1 6197 6570 -12 4 1231 491 358 138 29 chrX 84800707 84801259 -81849037 - L2 LINE L2 -532 2887 2276 4 1231 387 0 0 0 chrX 84801259 84801302 -81848994 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 1231 320 375 55 58 chrX 84801413 84801705 -81848591 + B4A SINE B4 2 292 0 4 1231 27 62 0 0 chrX 84802028 84802076 -81848220 + AT_rich Low_complexity Low_complexity 1 48 0 4 1231 261 0 0 0 chrX 84802763 84802792 -81847504 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 1231 529 317 7 20 chrX 84802834 84802982 -81847314 - B4A SINE B4 -16 276 131 4 1232 412 246 92 0 chrX 84803886 84804016 -81846280 + Lx8 LINE L1 5269 5410 -470 4 1232 5284 213 34 43 chrX 84804023 84805185 -81845111 + RMER12 LTR ERVK 1 1157 -165 4 1232 4382 29 0 0 chrX 84805185 84805704 -81844592 - L1Md_T LINE L1 0 6582 6064 4 1232 5284 213 34 43 chrX 84805704 84805716 -81844580 + RMER12 LTR ERVK 1158 1167 -155 4 1232 1993 169 9 0 chrX 84805716 84806059 -81844237 + ORR1A0 LTR MaLR 1 346 0 4 1232 5284 213 34 43 chrX 84806059 84806156 -81844140 + RMER12 LTR ERVK 1168 1261 -61 4 1232 941 283 82 26 chrX 84806250 84806761 -81843535 + Lx8 LINE L1 5387 5958 -1515 4 1232 765 266 19 19 chrX 84806804 84807015 -81843281 + B3 SINE B2 5 215 -1 4 1232 23 33 0 0 chrX 84807233 84807263 -81843033 + AT_rich Low_complexity Low_complexity 1 30 0 4 1232 26 50 0 0 chrX 84807542 84807582 -81842714 + AT_rich Low_complexity Low_complexity 1 40 0 4 1232 603 294 125 41 chrX 84807615 84807934 -81842362 + MLT1A0 LTR MaLR 2 347 -18 4 1232 21 0 0 0 chrX 84808323 84808344 -81841952 + AT_rich Low_complexity Low_complexity 1 21 0 4 1232 259 30 0 0 chrX 84809066 84809099 -81841197 - L1_Mm LINE L1 -4534 1349 1317 4 1232 845 63 8 0 chrX 84809099 84809225 -81841071 + L1Md_F2 LINE L1 6450 6576 -6 4 1232 21 0 0 0 chrX 84809295 84809316 -81840980 + AT_rich Low_complexity Low_complexity 1 21 0 4 1232 607 137 59 0 chrX 84809395 84809497 -81840799 - Lx3C LINE L1 -277 5609 5502 4 1232 6464 183 32 11 chrX 84809496 84810775 -81839521 + Lx3C LINE L1 5669 6974 -2 4 1232 585 312 46 28 chrX 84811220 84811504 -81838792 - MER2 DNA MER2_type -47 298 10 4 1232 565 302 123 54 chrX 84812963 84813648 -81836648 + L1MC1 LINE L1 5464 6196 -148 4 1232 207 100 0 0 chrX 84814403 84814433 -81835863 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1232 183 80 0 0 chrX 84814433 84814457 -81835839 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 1232 23 33 0 0 chrX 84814527 84814557 -81835739 + AT_rich Low_complexity Low_complexity 1 30 0 4 1232 21 0 0 0 chrX 84815050 84815071 -81835225 + AT_rich Low_complexity Low_complexity 1 21 0 4 1232 24 0 0 0 chrX 84815583 84815607 -81834689 + AT_rich Low_complexity Low_complexity 1 24 0 4 1232 25 31 0 0 chrX 84815657 84815689 -81834607 + AT_rich Low_complexity Low_complexity 1 32 0 4 1232 404 354 20 26 chrX 84816933 84817084 -81833212 - RSINE1 SINE B4 0 165 16 4 1232 21 36 0 0 chrX 84817740 84817768 -81832528 + AT_rich Low_complexity Low_complexity 1 28 0 4 1232 203 386 0 0 chrX 84818054 84818142 -81832154 - MIRb SINE MIR -35 233 146 4 1232 229 329 26 13 chrX 84818298 84818375 -81831921 + B3 SINE B2 139 216 0 4 1232 500 257 101 27 chrX 84818419 84818607 -81831689 + L1M2 LINE L1 5506 5707 -584 4 1232 662 265 26 35 chrX 84818607 84818838 -81831458 - RCHARR1 DNA MER1_type -438 536 308 4 1232 543 380 8 51 chrX 84818853 84819039 -81831257 - RCHARR1 DNA MER1_type -723 251 76 4 1232 3201 121 5 67 chrX 84819039 84819608 -81830688 - Lx LINE L1 -1 6653 6120 4 1232 543 380 8 51 chrX 84819608 84819676 -81830620 - RCHARR1 DNA MER1_type -899 75 8 4 1232 3520 162 21 85 chrX 84819688 84819789 -81830507 + Lx2B LINE L1 5163 5259 -627 4 1232 3573 55 2 0 chrX 84819789 84820244 -81830052 + L1Md_F2 LINE L1 6127 6582 0 4 1232 3520 162 21 85 chrX 84820244 84820312 -81829984 + Lx2B LINE L1 5260 5304 -582 4 1232 987 112 0 27 chrX 84820312 84820459 -81829837 + B1_Mus1 SINE Alu 1 143 -5 4 1232 7418 157 54 22 chrX 84820459 84822110 -81828186 + Lx2B LINE L1 5305 6995 -5 4 1232 677 126 26 26 chrX 84822118 84822232 -81828064 + Lx6 LINE L1 6765 6878 -582 4 1232 303 165 130 11 chrX 84822217 84822309 -81827987 - Lx2B LINE L1 -835 6165 6063 4 1232 416 217 24 0 chrX 84822342 84822425 -81827871 + Lx7 LINE L1 6923 7007 -689 4 1232 1446 259 48 24 chrX 84822415 84822846 -81827450 - Lx5 LINE L1 -821 6229 5787 4 1232 4198 55 4 7 chrX 84822846 84823393 -81826903 - L1Md_F2 LINE L1 0 6582 6038 4 1232 1446 259 48 24 chrX 84823393 84823424 -81826872 - Lx5 LINE L1 -1264 5786 5756 4 1232 3622 224 42 4 chrX 84823427 84824185 -81826111 + Lx5 LINE L1 6256 7042 -8 4 1232 2125 228 57 8 chrX 84824219 84824692 -81825604 + Lx6 LINE L1 6963 7458 -2 4 1232 793 248 156 12 chrX 84824702 84824959 -81825337 - L1MCa LINE L1 -6211 297 4 4 1232 225 326 30 71 chrX 84825081 84825180 -81825116 - B1F2 SINE Alu -54 95 1 5 1232 255 320 0 13 chrX 84825481 84825557 -81824739 - MTEa LTR MaLR -52 327 253 5 1232 405 297 58 41 chrX 84825664 84825959 -81824337 + L1MA6 LINE L1 5671 5970 -330 5 1232 222 380 28 47 chrX 84826228 84826443 -81823853 + MIRb SINE MIR 50 260 -8 5 1232 30 27 0 0 chrX 84827156 84827193 -81823103 + AT_rich Low_complexity Low_complexity 1 37 0 5 1232 21 57 0 0 chrX 84827557 84827592 -81822704 + AT_rich Low_complexity Low_complexity 1 35 0 5 1232 23 33 0 0 chrX 84827668 84827698 -81822598 + AT_rich Low_complexity Low_complexity 1 30 0 5 1232 503 340 18 1 chrX 84827792 84827956 -81822340 - Lx5 LINE L1 -100 6950 6813 5 1232 187 295 0 62 chrX 84828145 84828210 -81822086 - L4 LINE RTE -1726 303 243 5 1232 276 279 26 18 chrX 84828494 84828607 -81821689 + CT-rich Low_complexity Low_complexity 2 115 0 5 1232 641 307 31 20 chrX 84830481 84830677 -81819619 - B3A SINE B2 0 198 1 5 1232 351 366 60 40 chrX 84830844 84831393 -81818903 + L1ME3A LINE L1 5562 6121 -52 5 1232 222 225 0 0 chrX 84834303 84834383 -81815913 + (CA)n Simple_repeat Simple_repeat 1 80 0 5 1232 336 48 0 0 chrX 84834491 84834533 -81815763 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 5 1232 1614 195 107 33 chrX 84834554 84834747 -81815549 + MTC LTR MaLR 1 203 -218 5 1232 5291 48 6 0 chrX 84834747 84835409 -81814887 + L1Md_F2 LINE L1 5917 6582 0 5 1232 1614 195 107 33 chrX 84835409 84835607 -81814689 + MTC LTR MaLR 204 421 0 5 1232 1808 224 62 5 chrX 84835851 84836251 -81814045 - Lx9 LINE L1 -789 6855 6433 5 1232 1190 261 120 2 chrX 84836246 84836695 -81813601 + Lx9 LINE L1 7143 7644 0 5 1232 791 177 7 0 chrX 84836812 84836953 -81813343 + URR1B DNA MER1_type 84 225 0 5 1232 5121 82 22 16 chrX 84837368 84838125 -81812171 + L1_Mus3 LINE L1 5877 6638 0 5 1232 222 164 0 0 chrX 84838166 84838221 -81812075 + A-rich Low_complexity Low_complexity 1 55 0 5 1232 4165 43 0 0 chrX 84838637 84839143 -81811153 + L1Md_F2 LINE L1 6065 6570 -12 5 1232 484 338 78 27 chrX 84839674 84839893 -81810403 + B4A SINE B4 63 292 0 5 1232 21 0 0 0 chrX 84840386 84840407 -81809889 + AT_rich Low_complexity Low_complexity 1 21 0 5 1232 2763 162 31 12 chrX 84841306 84841824 -81808472 + Lx3C LINE L1 6447 6974 -2 5 1232 1338 141 45 8 chrX 84842305 84842549 -81807747 + Lx LINE L1 6402 6654 0 5 1232 392 275 0 0 chrX 84842679 84842770 -81807526 + B1_Mur2 SINE Alu 58 148 -1 5 1232 279 79 0 0 chrX 84842771 84842809 -81807487 + (CCA)n Simple_repeat Simple_repeat 1 38 0 5 1232 21 0 0 0 chrX 84843021 84843042 -81807254 + AT_rich Low_complexity Low_complexity 1 21 0 5 1232 23 0 0 0 chrX 84844022 84844045 -81806251 + AT_rich Low_complexity Low_complexity 1 23 0 5 1232 424 156 0 0 chrX 84844224 84844301 -81805995 + Lx9 LINE L1 7561 7637 -7 5 1232 298 333 79 0 chrX 84844337 84844451 -81805845 + B1F1 SINE Alu 6 128 -21 5 1232 183 100 0 0 chrX 84844511 84844541 -81805755 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5 1232 263 325 12 0 chrX 84844903 84844986 -81805310 + B4A SINE B4 209 292 0 5 1232 227 211 19 0 chrX 84844991 84845043 -81805253 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1232 269 48 48 0 chrX 84845766 84845808 -81804488 + (TTTTTG)n Simple_repeat Simple_repeat 4 47 0 5 1232 21 0 0 0 chrX 84847656 84847677 -81802619 + AT_rich Low_complexity Low_complexity 1 21 0 5 1232 314 202 26 68 chrX 84847730 84847847 -81802449 + Lx6 LINE L1 7341 7452 -8 5 1232 2436 186 38 30 chrX 84848030 84848569 -81801727 + Lx2B LINE L1 6397 7055 -3 5 1232 338 275 42 37 chrX 84848599 84848814 -81801482 + L1MA9 LINE L1 6019 6234 -78 5 1232 3875 142 32 10 chrX 84849234 84849915 -81800381 - Lx LINE L1 0 6654 5959 5 1232 313 348 13 86 chrX 84850252 84850403 -81799893 + RSINE1 SINE B4 1 140 -25 5 1232 24 0 0 0 chrX 84850447 84850471 -81799825 + AT_rich Low_complexity Low_complexity 1 24 0 5 1232 223 50 24 48 chrX 84851142 84851184 -81799112 + (CAA)n Simple_repeat Simple_repeat 2 42 0 5 1232 27 81 0 0 chrX 84852166 84852228 -81798068 + AT_rich Low_complexity Low_complexity 1 62 0 5 1232 258 164 0 0 chrX 84852450 84852505 -81797791 + GA-rich Low_complexity Low_complexity 2 56 0 5 1232 561 42 0 0 chrX 84852521 84852593 -81797703 + (CA)n Simple_repeat Simple_repeat 2 73 0 5 1232 1407 58 24 14 chrX 84853239 84853447 -81796849 + L1Md_F2 LINE L1 6373 6582 0 5 1232 21 57 0 0 chrX 84853801 84853836 -81796460 + AT_rich Low_complexity Low_complexity 1 35 0 5 1232 1044 175 92 0 chrX 84854340 84854546 -81795750 + URR1A DNA MER1_type 1 225 -1 5 1232 405 315 87 39 chrX 84854546 84854576 -81795720 - CYRA11_Mm Unknown Y-chromosome -437 180 140 5 1232 419 344 75 96 chrX 84854721 84855107 -81795189 - MTEb LTR MaLR 0 379 2 5 1232 2592 114 28 0 chrX 84857686 84858079 -81792217 + Lx3A LINE L1 6576 6979 -2 5 1232 375 78 0 0 chrX 84858079 84858130 -81792166 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 1232 314 304 140 7 chrX 84858130 84858266 -81792030 + HAL1-3A_ME LINE L1 2284 2437 -421 5 1232 272 230 96 70 chrX 84858270 84858392 -81791904 - RMER17D LTR ERVK -474 415 293 5 1232 1418 34 0 6 chrX 84858392 84858569 -81791727 + (GGGAA)n Simple_repeat Simple_repeat 2 177 0 5 1232 272 230 96 70 chrX 84858569 84858675 -81791621 - RMER17D LTR ERVK -597 292 181 5 1232 1403 211 22 9 chrX 84858675 84858991 -81791305 - Lx9 LINE L1 -465 7179 6860 5 1232 1083 248 24 20 chrX 84859034 84859188 -81791108 - Lx9 LINE L1 -871 6773 6619 5 1232 3045 50 0 48 chrX 84859188 84859605 -81790691 - L1_Mus2 LINE L1 0 6566 6170 5 1232 1083 248 24 20 chrX 84859605 84859701 -81790595 - Lx9 LINE L1 -1026 6618 6522 5 1232 253 275 46 84 chrX 84859964 84860095 -81790201 - MER45B DNA Tip100 -78 962 837 5 1232 1200 251 127 9 chrX 84860593 84860816 -81789480 + Lx7 LINE L1 7212 7447 -249 5 1232 324 0 0 0 chrX 84860816 84860852 -81789444 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1232 1200 251 127 9 chrX 84860852 84861062 -81789234 + Lx7 LINE L1 7448 7695 -1 5 1232 22 88 0 0 chrX 84861650 84861707 -81788589 + AT_rich Low_complexity Low_complexity 1 57 0 5 1232 276 53 0 0 chrX 84862349 84862387 -81787909 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1232 24 0 0 0 chrX 84862926 84862950 -81787346 + AT_rich Low_complexity Low_complexity 1 24 0 5 1232 928 267 115 69 chrX 84863242 84863632 -81786664 - Lx8 LINE L1 -937 6536 6129 5 1232 1038 145 100 13 chrX 84863833 84864086 -81786210 + Lx2A1 LINE L1 6742 7008 0 5 1232 828 134 0 0 chrX 84864105 84864239 -81786057 + (TA)n Simple_repeat Simple_repeat 2 135 0 5 1232 815 308 44 25 chrX 84864239 84864599 -81785697 - Lx9 LINE L1 -1655 5989 5623 5 1232 477 0 0 0 chrX 84865415 84865468 -81784828 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 1232 21 0 0 0 chrX 84866258 84866279 -81784017 + AT_rich Low_complexity Low_complexity 1 21 0 5 1232 30349 98 13 12 chrX 84867062 84872430 -81777866 + L1Md_F2 LINE L1 238 5585 -298 5 1232 6737 87 47 3 chrX 84872431 84873385 -81776911 + L1Md_F2 LINE L1 5587 6582 0 5 1232 17383 27 0 0 chrX 84873894 84876621 -81773675 - L1Md_T LINE L1 -1 6581 3854 5 1232 435 19 0 0 chrX 84877996 84878048 -81772248 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1232 1610 244 16 54 chrX 84878779 84879038 -81771258 + Lx6 LINE L1 7036 7292 -168 5 1232 459 0 0 0 chrX 84879038 84879089 -81771207 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1232 1610 244 16 54 chrX 84879089 84879257 -81771039 + Lx6 LINE L1 7293 7447 -13 5 1232 318 387 25 49 chrX 84879349 84879512 -81770784 - B4A SINE B4 0 292 134 5 1232 1649 235 31 17 chrX 84880174 84880589 -81769707 + MTC LTR MaLR 1 421 0 5 1232 5968 79 17 1 chrX 84880668 84881493 -81768803 + L1_Mus3 LINE L1 5799 6636 -2 5 1232 364 306 0 0 chrX 84881497 84881582 -81768714 - Lx7 LINE L1 -1170 6526 6442 5 1232 360 0 0 0 chrX 84882156 84882196 -81768100 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1232 501 62 0 0 chrX 84882196 84882261 -81768035 + (TG)n Simple_repeat Simple_repeat 1 65 0 5 1232 571 325 105 31 chrX 84882267 84882553 -81767743 + MLT1A0 LTR MaLR 5 311 -54 5 1232 349 273 155 103 chrX 84882554 84882709 -81767587 + RSINE1 SINE B4 3 165 0 5 1232 1781 108 7 38 chrX 84883321 84883610 -81766686 + L1Md_F2 LINE L1 6291 6570 -12 5 1232 8064 43 2 2 chrX 84883634 84884620 -81765676 + L1Md_F2 LINE L1 5597 6582 0 5 1232 1459 62 5 73 chrX 84885465 84885710 -81764586 + L1Md_F2 LINE L1 6366 6582 0 5 1232 31 82 0 0 chrX 84886022 84886095 -81764201 + AT_rich Low_complexity Low_complexity 1 73 0 5 1232 1857 325 69 38 chrX 84886694 84886786 -81763510 - Lx9 LINE L1 -31 7613 7504 5 1232 423 0 0 0 chrX 84886786 84886833 -81763463 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1232 1857 325 69 38 chrX 84886833 84887917 -81762379 - Lx9 LINE L1 -141 7503 6401 5 1232 186 103 0 0 chrX 84887922 84887951 -81762345 + (TGG)n Simple_repeat Simple_repeat 1 29 0 5 1232 227 211 18 0 chrX 84888005 84888062 -81762234 - PB1D9 SINE Alu -1 119 62 5 1232 269 315 0 14 chrX 84888374 84888448 -81761848 + RSINE1 SINE B4 2 74 -91 5 1232 194 292 0 20 chrX 84888815 84888864 -81761432 - L3b LINE CR1 -107 375 328 5 1232 186 87 45 27 chrX 84889168 84889210 -81761086 - L2b LINE L2 -1 3386 3343 5 1232 204 317 117 0 chrX 84889492 84889552 -81760744 + L2c LINE L2 3262 3328 -59 5 1232 22 0 0 0 chrX 84889774 84889796 -81760500 + AT_rich Low_complexity Low_complexity 1 22 0 5 1232 573 220 63 14 chrX 84889989 84890132 -81760164 + L1_Mur2 LINE L1 219 368 -6344 5 1232 34 42 0 0 chrX 84890189 84890237 -81760059 + AT_rich Low_complexity Low_complexity 1 48 0 5 1232 327 49 0 0 chrX 84890558 84890599 -81759697 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1232 399 202 38 9 chrX 84891223 84891328 -81758968 + Lx3B LINE L1 6862 6969 -4 6 1232 207 0 0 0 chrX 84892099 84892122 -81758174 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 1232 693 267 32 84 chrX 84893899 84894189 -81756107 + RLTR11A LTR ERVK 168 458 -105 6 1232 449 352 7 7 chrX 84895161 84895304 -81754992 + RSINE1 SINE B4 3 145 -20 6 1232 34 42 0 0 chrX 84895322 84895370 -81754926 + AT_rich Low_complexity Low_complexity 1 48 0 6 1232 291 166 14 68 chrX 84895481 84895689 -81754607 + T-rich Low_complexity Low_complexity 1 196 0 6 1232 961 80 7 0 chrX 84895691 84895828 -81754468 - B1_Mus1 SINE Alu 0 148 11 6 1232 4510 58 7 0 chrX 84896455 84897021 -81753275 + L1_Mus2 LINE L1 5833 6402 -164 6 1232 313 327 63 35 chrX 84897021 84897195 -81753101 + L1MD3 LINE L1 7777 7955 -40 6 1232 279 0 0 0 chrX 84897691 84897722 -81752574 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 6 1232 262 320 64 39 chrX 84898057 84898213 -81752083 + MER104 DNA Tc2 15 174 -7 6 1232 189 355 8 90 chrX 84900138 84900271 -81750025 + MIRc SINE MIR 28 149 -119 6 1232 424 347 38 87 chrX 84900574 84900757 -81749539 - B4A SINE B4 -116 176 3 6 1232 389 344 71 98 chrX 84902532 84902899 -81747397 + ORR1E LTR MaLR 1 357 -2 6 1232 360 43 0 0 chrX 84903413 84903459 -81746837 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 6 1232 225 307 108 10 chrX 84905362 84905464 -81744832 + MER5A1 DNA MER1_type 14 125 -41 6 1232 1215 180 8 4 chrX 84905757 84905991 -81744305 - Lx3B LINE L1 0 6973 6739 6 1232 421 295 94 10 chrX 84907082 84907284 -81743012 + Tigger13a DNA MER2_type 303 521 -250 6 1232 194 91 30 0 chrX 84907978 84908011 -81742285 + (TTG)n Simple_repeat Simple_repeat 3 36 0 6 1232 25 31 0 0 chrX 84909776 84909808 -81740488 + AT_rich Low_complexity Low_complexity 1 32 0 6 1232 21 0 0 0 chrX 84911272 84911293 -81739003 + AT_rich Low_complexity Low_complexity 1 21 0 6 1232 615 92 0 0 chrX 84911702 84911789 -81738507 + (GAAA)n Simple_repeat Simple_repeat 2 88 0 6 1232 4973 129 31 53 chrX 84912007 84912938 -81737358 + Lx3C LINE L1 5731 6642 -334 6 1232 1098 158 27 13 chrX 84912940 84913164 -81737132 + Lx3C LINE L1 6748 6974 -2 6 1232 32 26 0 0 chrX 84913168 84913207 -81737089 + AT_rich Low_complexity Low_complexity 1 39 0 6 1232 341 247 97 0 chrX 84913788 84913881 -81736415 - PB1D10 SINE Alu -11 106 5 6 1232 4109 77 0 2 chrX 84914001 84914538 -81735758 - L1_Mus2 LINE L1 0 6566 6031 6 1232 4714 86 24 1 chrX 84914559 84915485 -81734811 - L1_Mus3 LINE L1 -2 6582 5219 6 1232 2741 86 13 0 chrX 84917377 84917763 -81732533 + Lx3_Mus LINE L1 6609 6999 -10 6 1232 483 63 0 0 chrX 84918118 84918181 -81732115 + (TC)n Simple_repeat Simple_repeat 2 64 0 6 1232 343 313 43 87 chrX 84919553 84919714 -81730582 + B4 SINE B4 13 166 -126 6 1232 321 26 0 0 chrX 84920010 84920048 -81730248 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1232 411 331 125 72 chrX 84920080 84920344 -81729952 - B4 SINE B4 -13 279 2 6 1232 590 320 62 62 chrX 84920593 84921137 -81729159 + L1MB8 LINE L1 5624 6167 -11 6 1232 1177 54 0 0 chrX 84921436 84921584 -81728712 + B1_Mus1 SINE Alu 1 148 0 6 1232 221 57 29 0 chrX 84922511 84922546 -81727750 + (TTATA)n Simple_repeat Simple_repeat 5 40 0 6 1232 25 31 0 0 chrX 84922874 84922906 -81727390 + AT_rich Low_complexity Low_complexity 1 32 0 6 1232 1256 98 29 14 chrX 84923271 84923479 -81726817 + Lx3A LINE L1 6771 6981 0 6 1232 321 26 0 0 chrX 84923479 84923517 -81726779 + (GA)n Simple_repeat Simple_repeat 2 39 0 6 1232 860 43 0 25 chrX 84923517 84923635 -81726661 + (GAAAA)n Simple_repeat Simple_repeat 5 119 0 6 1232 204 67 0 0 chrX 84923734 84923764 -81726532 + (TTG)n Simple_repeat Simple_repeat 1 30 0 6 1232 1109 70 0 0 chrX 84923770 84923912 -81726384 - B1_Mus2 SINE Alu -4 143 2 6 1232 182 33 67 0 chrX 84923993 84924023 -81726273 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 6 1232 215 355 39 26 chrX 84924722 84924800 -81725496 + B1_Mus2 SINE Alu 7 85 -62 6 1232 3343 111 21 8 chrX 84925147 84925672 -81724624 + Lx3_Mus LINE L1 6477 7008 -1 6 1232 182 37 0 36 chrX 84925992 84926020 -81724276 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 6 1232 772 186 7 0 chrX 84926780 84926925 -81723371 + URR1A DNA MER1_type 76 221 -5 6 1232 705 229 90 33 chrX 84927636 84927848 -81722448 + RMER17C-int LTR ERVK 2901 3124 -114 6 1232 242 56 0 27 chrX 84927848 84927885 -81722411 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 6 1232 454 212 0 126 chrX 84927885 84928020 -81722276 + RMER17C-int LTR ERVK 3121 3238 0 6 1232 291 242 47 55 chrX 84928020 84928274 -81722022 + RMER17C LTR ERVK 1 252 -158 6 1232 216 226 19 0 chrX 84928277 84928330 -81721966 + CT-rich Low_complexity Low_complexity 4 57 0 6 1232 23 0 0 0 chrX 84928367 84928390 -81721906 + AT_rich Low_complexity Low_complexity 1 23 0 6 1232 385 199 31 8 chrX 84929112 84929239 -81721057 + (TATATG)n Simple_repeat Simple_repeat 5 134 0 6 1232 295 226 10 10 chrX 84929480 84929583 -81720713 + (TA)n Simple_repeat Simple_repeat 2 104 0 6 1232 555 147 0 0 chrX 84930343 84930445 -81719851 + L1_Mus3 LINE L1 6537 6638 0 6 1232 491 56 14 0 chrX 84930471 84930542 -81719754 + (TA)n Simple_repeat Simple_repeat 2 73 0 6 1232 490 152 166 63 chrX 84930542 84930653 -81719643 - Lx3A LINE L1 0 6976 6878 6 1232 180 0 0 0 chrX 84930653 84930673 -81719623 + (CACCC)n Simple_repeat Simple_repeat 3 22 0 6 1232 490 173 160 69 chrX 84930673 84930710 -81719586 - Lx3A LINE L1 -103 6878 6821 6 1232 1053 75 0 7 chrX 84930923 84931057 -81719239 + B1_Mus2 SINE Alu 2 134 -13 6 1232 186 71 0 0 chrX 84931057 84931085 -81719211 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 1232 1053 75 0 7 chrX 84931085 84931097 -81719199 + B1_Mus2 SINE Alu 135 146 -1 6 1232 1034 60 67 0 chrX 84931115 84931249 -81719047 + B1_Mus2 SINE Alu 3 145 -2 6 1232 1624 303 76 68 chrX 84932318 84933600 -81716696 + Lx5 LINE L1 5910 7414 -46 6 1232 221 248 0 70 chrX 84933612 84933655 -81716641 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 6 1232 1001 122 0 13 chrX 84933655 84933805 -81716491 + B1_Mus1 SINE Alu 1 148 0 6 1232 221 248 0 70 chrX 84933805 84933904 -81716392 + (TAAA)n Simple_repeat Simple_repeat 1 94 0 6 19 5099 74 0 0 chrX 84934208 84934886 -81715410 - L1Md_F2 LINE L1 -875 5008 4331 6 1233 4191 77 2 4 chrX 84934886 84935447 -81714849 + L1Md_F2 LINE L1 5027 5586 -297 6 1233 7253 65 22 6 chrX 84935448 84936427 -81713869 + L1Md_F2 LINE L1 5588 6582 0 6 1233 3698 68 0 0 chrX 84938033 84938507 -81711789 + L1_Mus1 LINE L1 6092 6565 -2 6 1233 442 325 0 0 chrX 84938820 84938946 -81711350 + RSINE1 SINE B4 2 127 -38 6 1233 32 67 0 0 chrX 84939656 84939716 -81710580 + AT_rich Low_complexity Low_complexity 1 60 0 6 1233 758 227 215 5 chrX 84939950 84940136 -81710160 + Lx5 LINE L1 6823 7047 -3 6 1233 1622 271 25 18 chrX 84940412 84940960 -81709336 + Lx9 LINE L1 7050 7631 -13 6 1233 5059 49 0 0 chrX 84941133 84941762 -81708534 - L1Md_F2 LINE L1 -2 6580 5952 6 1233 272 70 23 0 chrX 84942706 84942749 -81707547 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1233 404 341 22 79 chrX 84942834 84943012 -81707284 - B3A SINE B2 -6 192 25 6 1233 21 82 0 0 chrX 84943190 84943239 -81707057 + AT_rich Low_complexity Low_complexity 1 49 0 6 1233 209 169 17 0 chrX 84943303 84943362 -81706934 + (TG)n Simple_repeat Simple_repeat 2 61 0 6 1233 7165 37 1 2 chrX 84945735 84946612 -81703684 + L1Md_F2 LINE L1 5695 6570 -12 6 1233 1595 139 15 11 chrX 84946686 84946707 -81703589 + Lx3B LINE L1 6704 6726 -247 6 1233 1748 174 16 26 chrX 84946707 84947019 -81703277 + RLTR27 LTR ERVK 1 309 0 6 1233 1595 139 15 11 chrX 84947019 84947266 -81703030 + Lx3B LINE L1 6727 6973 0 6 1233 448 348 43 0 chrX 84947352 84947493 -81702803 + B4 SINE B4 26 172 -120 6 1233 2316 165 52 10 chrX 84949212 84949679 -81700617 + Lx3B LINE L1 6007 6470 -580 6 1233 322 250 31 42 chrX 84949851 84949947 -81700349 + L1MB5 LINE L1 6043 6137 -37 6 1233 2717 61 6 14 chrX 84950107 84950473 -81699823 + L1Md_F2 LINE L1 6218 6580 -2 6 1233 407 291 22 83 chrX 84950541 84950818 -81699478 + L1MB7 LINE L1 5835 6094 -90 6 1233 629 167 8 0 chrX 84950819 84950945 -81699351 + CT-rich Low_complexity Low_complexity 4 130 0 6 1233 269 89 232 0 chrX 84951203 84951259 -81699037 + L1_Mur1 LINE L1 4900 4968 -918 6 1233 21 0 0 0 chrX 84951259 84951280 -81699016 + AT_rich Low_complexity Low_complexity 1 21 0 6 1233 605 277 7 0 chrX 84951358 84951499 -81698797 + B1_Mur1 SINE Alu 2 143 -6 6 1233 639 270 70 0 chrX 84951707 84951871 -81698425 + B3 SINE B2 2 169 -47 6 1233 746 109 8 0 chrX 84951871 84951999 -81698297 + (TA)n Simple_repeat Simple_repeat 2 130 0 6 1233 639 270 70 0 chrX 84951999 84952019 -81698277 + B3 SINE B2 170 198 -18 6 1233 21 0 0 0 chrX 84952051 84952072 -81698224 + AT_rich Low_complexity Low_complexity 1 21 0 6 1233 23 0 0 0 chrX 84952191 84952214 -81698082 + AT_rich Low_complexity Low_complexity 1 23 0 6 1233 275 162 26 26 chrX 84952979 84953055 -81697241 + T-rich Low_complexity Low_complexity 5 80 0 6 1233 3833 60 0 0 chrX 84953333 84953816 -81696480 + L1_Mus1 LINE L1 6085 6567 0 6 1233 807 32 0 0 chrX 84953877 84953971 -81696325 + L1_Mus2 LINE L1 6151 6244 -322 6 1233 2733 47 8 6 chrX 84953971 84954334 -81695962 + MTA_Mm LTR MaLR 28 391 -5 6 1233 1972 102 0 60 chrX 84954334 84954648 -81695648 + L1_Mus2 LINE L1 6272 6566 0 6 1233 542 140 10 0 chrX 84954725 84954825 -81695471 + (CA)n Simple_repeat Simple_repeat 1 101 0 6 1233 711 70 252 9 chrX 84954889 84955004 -81695292 - B1_Mm SINE Alu -4 143 1 6 1233 1157 55 0 7 chrX 84955091 84955238 -81695058 + B1_Mm SINE Alu 1 146 -1 6 1233 318 67 21 73 chrX 84955238 84955334 -81694962 + (CAAA)n Simple_repeat Simple_repeat 1 91 0 6 1233 35 63 0 0 chrX 84958188 84958251 -81692045 + AT_rich Low_complexity Low_complexity 1 63 0 6 1233 586 331 11 6 chrX 84958678 84958860 -81691436 - Lx8 LINE L1 -159 7314 7132 6 1233 234 0 0 0 chrX 84958866 84958892 -81691404 + (T)n Simple_repeat Simple_repeat 1 26 0 7 1233 280 241 177 57 chrX 84958924 84959001 -81691295 - Lx8 LINE L1 -495 6978 6893 6 1233 1148 246 63 74 chrX 84959001 84959379 -81690917 - ORR1D1 LTR MaLR 0 374 1 7 1233 280 241 177 57 chrX 84959379 84959442 -81690854 - Lx8 LINE L1 -581 6892 6821 6 1233 552 73 0 0 chrX 84959442 84959524 -81690772 + (TG)n Simple_repeat Simple_repeat 2 83 0 7 1233 355 333 0 0 chrX 84959587 84959674 -81690622 + ID_B1 SINE B4 14 100 -124 7 1233 1675 48 0 0 chrX 84960195 84960404 -81689892 + L1_Mur1 LINE L1 4844 5052 -834 7 1233 264 59 0 0 chrX 84961001 84961035 -81689261 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 7 1233 297 261 66 86 chrX 84961886 84962037 -81688259 - MER3 DNA MER1_type -51 158 11 7 1233 660 59 0 0 chrX 84962653 84962738 -81687558 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 7 1233 4178 51 15 2 chrX 84963437 84963969 -81686327 + L1Md_F2 LINE L1 6031 6569 -13 7 1233 281 321 45 22 chrX 84964067 84964201 -81686095 - MIR SINE MIR -40 222 86 7 1233 420 372 161 18 chrX 84966458 84967024 -81683272 + L2 LINE L2 710 1356 -2063 7 1233 860 320 137 38 chrX 84967199 84967812 -81682484 + L2 LINE L2 1411 2084 -1335 7 1233 22 35 0 0 chrX 84968748 84968777 -81681519 + AT_rich Low_complexity Low_complexity 1 29 0 7 1233 4368 87 22 13 chrX 84968809 84969436 -81680860 - L1_Mus2 LINE L1 -1 6565 5933 7 1233 402 69 0 0 chrX 84969839 84969897 -81680399 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 1233 21 36 0 0 chrX 84970702 84970730 -81679566 + AT_rich Low_complexity Low_complexity 1 28 0 7 1233 2848 104 36 11 chrX 84970730 84971176 -81679120 - Lx3A LINE L1 -5 6976 6520 7 1233 593 151 8 0 chrX 84971648 84971767 -81678529 + (TA)n Simple_repeat Simple_repeat 2 121 0 7 1233 25 0 0 0 chrX 84971981 84972006 -81678290 + AT_rich Low_complexity Low_complexity 1 25 0 7 1233 2403 101 0 35 chrX 84972707 84972761 -81677535 + RLTR10D LTR ERVK 1 47 -312 7 1233 3999 44 4 2 chrX 84972761 84973259 -81677037 - L1Md_F2 LINE L1 0 6582 6084 7 1233 2403 101 0 35 chrX 84973259 84973573 -81676723 + RLTR10D LTR ERVK 48 356 -3 7 1233 448 61 0 0 chrX 84973830 84973896 -81676400 - L1_Mus2 LINE L1 -1 6565 6500 7 1233 426 20 0 0 chrX 84974878 84974929 -81675367 + (TG)n Simple_repeat Simple_repeat 1 51 0 7 1233 314 279 124 16 chrX 84975104 84975290 -81675006 + L1MA6 LINE L1 5936 6141 -159 7 1233 39 38 0 0 chrX 84975436 84975489 -81674807 + AT_rich Low_complexity Low_complexity 1 53 0 7 1233 3339 37 97 127 chrX 84975994 84976584 -81673712 + RLTR6_Mm LTR ERV1 1 572 -82 7 1233 471 63 0 0 chrX 84977706 84977769 -81672527 + (CA)n Simple_repeat Simple_repeat 2 64 0 7 1233 277 98 32 32 chrX 84977770 84977833 -81672463 + (CAGAGA)n Simple_repeat Simple_repeat 2 64 0 7 1233 30 0 0 0 chrX 84978048 84978078 -81672218 + AT_rich Low_complexity Low_complexity 1 30 0 7 1233 329 355 18 0 chrX 84978237 84978347 -81671949 + PB1D7 SINE Alu 1 112 -8 7 1233 2276 105 0 3 chrX 84978452 84978776 -81671520 + L1_Mus1 LINE L1 6245 6567 0 7 1233 22 80 0 0 chrX 84979089 84979139 -81671157 + AT_rich Low_complexity Low_complexity 1 50 0 7 1233 24 32 0 0 chrX 84979377 84979408 -81670888 + AT_rich Low_complexity Low_complexity 1 31 0 7 1233 268 207 27 10 chrX 84979549 84979644 -81670652 + L1MB3 LINE L1 6073 6181 -2 7 1233 488 257 25 42 chrX 84979682 84979800 -81670496 - RSINE1 SINE B4 -41 124 9 7 1233 1052 69 21 0 chrX 84980176 84980321 -81669975 - B1_Mus1 SINE Alu 0 148 1 7 1233 426 239 9 0 chrX 84981127 84981236 -81669060 + L1MA8 LINE L1 6087 6196 -95 7 1233 1755 219 28 8 chrX 84981317 84981818 -81668478 + Lx3C LINE L1 5863 6404 -654 7 1233 1935 206 42 0 chrX 84981823 84982255 -81668041 + Lx3C LINE L1 6525 6974 -2 7 1233 489 346 86 14 chrX 84982870 84983160 -81667136 + MER2 DNA MER2_type 26 336 -9 7 1233 29 0 0 0 chrX 84983620 84983649 -81666647 + AT_rich Low_complexity Low_complexity 1 29 0 7 1233 426 39 0 0 chrX 84984255 84984307 -81665989 + (TA)n Simple_repeat Simple_repeat 2 53 0 7 1233 383 333 45 0 chrX 84984383 84984515 -81665781 + ID_B1 SINE B4 81 218 -6 7 1233 795 149 0 0 chrX 84984523 84984782 -81665514 + (CA)n Simple_repeat Simple_repeat 1 259 0 7 1233 2398 159 22 0 chrX 84984785 84985201 -81665095 + Lx3B LINE L1 6546 6970 -3 7 1233 32 26 0 0 chrX 84985213 84985252 -81665044 + AT_rich Low_complexity Low_complexity 1 39 0 7 1233 445 246 103 21 chrX 84985382 84985527 -81664769 - MER58A DNA MER1_type -3 221 65 7 1233 510 293 7 13 chrX 84986698 84986850 -81663446 + Lx9 LINE L1 6324 6474 -1170 7 1233 1289 254 71 12 chrX 84986847 84987257 -81663039 + Lx9 LINE L1 6892 7325 -319 7 1233 6612 103 18 11 chrX 84987264 84988238 -81662058 + Lx LINE L1 5662 6641 -13 7 1233 1168 146 126 11 chrX 84988264 84988391 -81661905 + Lx9 LINE L1 7334 7476 -168 7 1233 393 22 0 0 chrX 84988391 84988437 -81661859 + (TA)n Simple_repeat Simple_repeat 2 47 0 7 1233 1168 146 126 11 chrX 84988437 84988587 -81661709 + Lx9 LINE L1 7477 7642 -2 7 1233 610 292 65 65 chrX 84988711 84988927 -81661369 - B3A SINE B2 0 216 1 7 1233 294 78 0 0 chrX 84989765 84989816 -81660480 + L1Md_T LINE L1 6532 6582 0 7 1233 243 318 0 16 chrX 84989827 84989891 -81660405 + RSINE1 SINE B4 1 63 -102 7 1233 287 371 34 0 chrX 84990055 84990144 -81660152 + RSINE1 SINE B4 64 155 -10 7 1233 22 88 0 0 chrX 84990422 84990479 -81659817 + AT_rich Low_complexity Low_complexity 1 57 0 7 1233 617 245 0 33 chrX 84991882 84992034 -81658262 + B1_Mur1 SINE Alu 3 149 0 7 1233 22 0 0 0 chrX 84992581 84992603 -81657693 + AT_rich Low_complexity Low_complexity 1 22 0 7 1233 2069 202 77 61 chrX 84992670 84993245 -81657051 - RMER1C Other Other -11 1331 748 7 1233 313 364 24 32 chrX 84993497 84993622 -81656674 - LTR87 LTR ERVL? -466 158 35 7 1233 1090 195 34 4 chrX 84993840 84994103 -81656193 - L1Md_A LINE L1 -1 6581 6311 7 1233 2388 73 3 3 chrX 84994641 84994972 -81655324 + L1Md_F2 LINE L1 6252 6582 0 7 1233 21 36 0 0 chrX 84995160 84995188 -81655108 + AT_rich Low_complexity Low_complexity 1 28 0 7 1233 26 88 0 0 chrX 84995329 84995397 -81654899 + AT_rich Low_complexity Low_complexity 1 68 0 7 1233 1212 271 23 16 chrX 84995816 84996124 -81654172 - MTD LTR MaLR -31 388 79 7 1233 335 333 7 13 chrX 84997042 84997194 -81653102 + Lx8 LINE L1 5772 5922 -1551 7 1233 573 325 14 5 chrX 84997341 84997554 -81652742 + Lx8 LINE L1 6804 7018 -455 7 1233 933 331 71 15 chrX 84997578 84998044 -81652252 + Lx8 LINE L1 6197 6688 -785 7 1233 7218 93 9 1 chrX 84998057 84999468 -81650828 - L1_Mus1 LINE L1 -1 6653 5142 7 1233 2210 116 0 9 chrX 84999467 84999799 -81650497 + L1_Mus1 LINE L1 4819 5147 -736 7 1233 405 0 0 0 chrX 84999888 84999933 -81650363 + (TA)n Simple_repeat Simple_repeat 1 45 0 7 1233 222 37 0 0 chrX 85000040 85000067 -81650229 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 1 1233 918 106 28 0 chrX 85000067 85000209 -81650087 - B1_Mus1 SINE Alu 0 148 3 2 1233 355 301 40 34 chrX 85000350 85000498 -81649798 + Lx8 LINE L1 7216 7364 -109 3 1233 468 0 0 0 chrX 85000537 85000589 -81649707 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1233 693 66 0 0 chrX 85002080 85002171 -81648125 + (GAAA)n Simple_repeat Simple_repeat 2 92 0 5 1233 282 179 0 0 chrX 85002330 85002386 -81647910 + (CAA)n Simple_repeat Simple_repeat 2 57 0 6 1233 229 289 40 0 chrX 85003468 85003544 -81646752 - MTE2b LTR MaLR 0 379 301 7 1233 569 26 39 0 chrX 85004131 85004208 -81646088 + (TATATG)n Simple_repeat Simple_repeat 5 84 0 8 1233 221 239 0 0 chrX 85004503 85004549 -81645747 + CT-rich Low_complexity Low_complexity 6 51 0 9 1233 437 345 97 6 chrX 85005242 85005445 -81644851 - MIRb SINE MIR -20 248 18 1 1233 292 180 0 0 chrX 85007051 85007112 -81643184 + Lx3A LINE L1 6919 6979 -2 1 1233 242 221 15 0 chrX 85007437 85007505 -81642791 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 1 1233 2274 45 0 7 chrX 85007553 85007841 -81642455 + L1_Mus1 LINE L1 6282 6567 0 1 1233 243 0 0 0 chrX 85008046 85008073 -81642223 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1233 1410 245 77 23 chrX 85008136 85008554 -81641742 + Lx6 LINE L1 6834 7540 -156 1 1233 251 314 42 8 chrX 85008635 85008754 -81641542 + Lx7 LINE L1 7189 7311 -385 1 1233 203 127 63 0 chrX 85008809 85008872 -81641424 + T-rich Low_complexity Low_complexity 2 68 0 1 1233 21 36 0 0 chrX 85008895 85008923 -81641373 + AT_rich Low_complexity Low_complexity 1 28 0 1 1233 52 17 0 0 chrX 85008998 85009057 -81641239 + AT_rich Low_complexity Low_complexity 1 59 0 1 1233 423 0 0 0 chrX 85012374 85012421 -81637875 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 2 1233 253 196 67 59 chrX 85013037 85013156 -81637140 - Lx6 LINE L1 -31 7429 7310 2 1233 522 101 30 10 chrX 85013701 85013801 -81636495 + (TTTC)n Simple_repeat Simple_repeat 2 103 0 2 1233 1971 150 32 0 chrX 85014087 85014434 -81635862 + Lx LINE L1 6297 6654 0 2 1233 1088 95 0 0 chrX 85014845 85014992 -81635304 + B1_Mus1 SINE Alu 2 148 0 2 1233 222 75 36 36 chrX 85014997 85015052 -81635244 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 2 1233 237 348 0 14 chrX 85015079 85015149 -81635147 + RSINE1 SINE B4 3 71 -94 2 1233 189 0 0 0 chrX 85015466 85015487 -81634809 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1233 1109 278 72 15 chrX 85015538 85016078 -81634218 + L1MC LINE L1 2458 3028 -3118 2 1233 1842 69 8 0 chrX 85016431 85016676 -81633620 - L1_Mus1 LINE L1 -1 6566 6320 2 1233 182 83 0 53 chrX 85016856 85016894 -81633402 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 3 1233 750 58 0 0 chrX 85017039 85017143 -81633153 + (TTC)n Simple_repeat Simple_repeat 1 104 0 3 1233 5577 106 45 4 chrX 85017837 85019381 -81630915 + L1Md_F LINE L1 363 1977 -3906 3 1233 252 77 0 0 chrX 85019381 85019420 -81630876 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 3 1233 5577 89 2 8 chrX 85019420 85019460 -81630836 + L1Md_F LINE L1 1978 2017 -3866 3 1233 5144 75 12 19 chrX 85019460 85020185 -81630111 + L1Md_F2 LINE L1 5862 6581 -1 3 1233 5577 89 2 8 chrX 85020185 85020217 -81630079 + L1Md_F LINE L1 2018 2045 -3838 3 1233 560 287 40 29 chrX 85020447 85020720 -81629576 + L1MC LINE L1 3651 3926 -2220 2 1233 452 308 33 0 chrX 85020763 85020883 -81629413 - RSINE1 SINE B4 -12 153 30 3 1233 27 0 0 0 chrX 85021402 85021429 -81628867 + AT_rich Low_complexity Low_complexity 1 27 0 3 1233 796 114 0 8 chrX 85021480 85021604 -81628692 - Lx3B LINE L1 -313 6660 6538 3 1233 1356 150 22 11 chrX 85021605 85021874 -81628422 + Lx3B LINE L1 6695 6966 -7 3 1233 2848 122 9 2 chrX 85021971 85022397 -81627899 - L1_Mus3 LINE L1 -8 6630 6202 3 1233 12665 108 10 3 chrX 85022397 85024986 -81625310 + L1_Mus1 LINE L1 3954 6565 -2 3 1233 225 233 27 0 chrX 85024992 85025065 -81625231 + A-rich Low_complexity Low_complexity 2 76 0 4 1233 1493 318 115 43 chrX 85025065 85025559 -81624737 + Lx8 LINE L1 6575 7141 -332 4 1233 5482 129 56 11 chrX 85025559 85026466 -81623830 + Lx3_Mus LINE L1 6050 6997 -12 4 1233 1493 318 115 43 chrX 85026466 85026808 -81623488 + Lx8 LINE L1 7142 7471 -2 4 1233 274 286 61 72 chrX 85026991 85027172 -81623124 - Charlie1 DNA MER1_type -2371 410 232 4 1233 1838 38 80 0 chrX 85029058 85029295 -81621001 - L1Md_T LINE L1 0 6582 6327 4 1233 2629 72 32 0 chrX 85029285 85029632 -81620664 - L1_Mus1 LINE L1 -16 6551 6194 4 1233 2282 73 3 3 chrX 85029633 85029947 -81620349 + L1_Mus1 LINE L1 5829 6142 -425 4 1233 21 0 0 0 chrX 85029962 85029983 -81620313 + AT_rich Low_complexity Low_complexity 1 21 0 4 1233 1674 343 54 101 chrX 85030160 85030249 -81620047 + Lx8 LINE L1 6086 6202 -1271 4 1233 426 39 0 0 chrX 85030249 85030301 -81619995 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1233 1674 343 54 101 chrX 85030301 85031603 -81618693 + Lx8 LINE L1 6203 7411 -62 4 1233 412 320 122 23 chrX 85031685 85031947 -81618349 + L1M4 LINE L1 5307 5594 -648 4 1233 441 54 0 0 chrX 85032289 85032345 -81617951 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 1233 1300 275 29 73 chrX 85032345 85032827 -81617469 - Lx6 LINE L1 -30 7430 6970 5 1233 236 161 36 0 chrX 85032984 85033040 -81617256 + (TA)n Simple_repeat Simple_repeat 1 58 0 5 1233 23 0 0 0 chrX 85033463 85033486 -81616810 + AT_rich Low_complexity Low_complexity 1 23 0 5 1233 29 47 0 0 chrX 85033784 85033827 -81616469 + AT_rich Low_complexity Low_complexity 1 43 0 5 1233 2764 91 2 51 chrX 85034341 85034770 -81615526 + L1Md_F2 LINE L1 6172 6579 -3 5 1233 636 14 0 0 chrX 85036235 85036308 -81613988 + (TG)n Simple_repeat Simple_repeat 1 73 0 5 1233 26 50 0 0 chrX 85036499 85036539 -81613757 + AT_rich Low_complexity Low_complexity 1 40 0 5 1233 1172 105 0 0 chrX 85037272 85037444 -81612852 + L1_Mus1 LINE L1 6396 6567 0 5 1233 1149 68 0 0 chrX 85037499 85037645 -81612651 + B1_Mm SINE Alu 2 147 0 5 1233 244 286 0 0 chrX 85037676 85037725 -81612571 + ID4 SINE ID 4 52 -31 6 1233 372 59 0 0 chrX 85037782 85037833 -81612463 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1233 212 189 0 0 chrX 85037846 85037883 -81612413 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 6 1233 29 28 0 0 chrX 85038114 85038150 -81612146 + AT_rich Low_complexity Low_complexity 1 36 0 6 1233 290 299 9 0 chrX 85038601 85038708 -81611588 + Lx5 LINE L1 920 1027 -6059 6 1233 496 167 103 7 chrX 85038702 85038847 -81611449 + Lx5 LINE L1 1891 2049 -3828 6 1233 450 0 0 0 chrX 85038851 85038901 -81611395 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 1233 333 0 0 0 chrX 85038901 85038937 -81611359 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 1233 1398 220 49 84 chrX 85038946 85039313 -81610983 - ORR1B1 LTR MaLR 0 394 41 6 1233 6844 190 55 134 chrX 85039320 85041450 -81608846 - ORR1B1-int LTR MaLR 0 1963 1 6 1233 1767 171 47 9 chrX 85041450 85041792 -81608504 - ORR1B1 LTR MaLR 0 394 40 6 1233 7922 154 103 26 chrX 85041792 85042638 -81607658 + Lx5 LINE L1 2063 3045 -2832 6 1233 663 48 0 0 chrX 85042638 85042721 -81607575 + (GGA)n Simple_repeat Simple_repeat 3 85 0 6 1233 7922 208 98 41 chrX 85042721 85046465 -81603831 + Lx5 LINE L1 3046 7050 0 6 1233 25 83 0 0 chrX 85046863 85046923 -81603373 + AT_rich Low_complexity Low_complexity 1 60 0 6 1233 273 298 55 24 chrX 85047055 85047182 -81603114 - LTR37A LTR ERV1 -2 424 294 7 1233 1123 180 8 51 chrX 85048065 85048299 -81601997 - URR1B DNA MER1_type -1 224 1 7 1233 13120 65 5 5 chrX 85048819 85049241 -81601055 + L1Md_F2 LINE L1 3848 4273 -1610 7 1233 6456 57 12 0 chrX 85049241 85050079 -81600217 + L1Md_F3 LINE L1 5723 6570 -14 7 1233 13120 65 5 5 chrX 85050079 85051396 -81598900 + L1Md_F2 LINE L1 4274 5586 -297 7 1233 7306 69 14 4 chrX 85051397 85052382 -81597914 + L1Md_F2 LINE L1 5588 6582 0 7 1233 535 294 66 42 chrX 85052784 85052997 -81597299 + L3 LINE CR1 4268 4485 -4 7 1233 729 318 114 62 chrX 85054415 85054992 -81595304 + MER92B LTR ERV1 30 636 0 7 1233 405 0 0 0 chrX 85055330 85055375 -81594921 + (TA)n Simple_repeat Simple_repeat 1 45 0 7 1233 26 74 0 0 chrX 85055750 85055804 -81594492 + AT_rich Low_complexity Low_complexity 1 54 0 7 1233 436 316 42 41 chrX 85058915 85059228 -81591068 + ORR1E LTR MaLR 3 372 -7 7 1233 1121 234 106 34 chrX 85059228 85059577 -81590719 - ORR1D1 LTR MaLR 0 374 1 7 1233 23 0 0 0 chrX 85060616 85060639 -81589657 + AT_rich Low_complexity Low_complexity 1 23 0 8 1233 276 320 0 20 chrX 85062183 85062282 -81588014 + ID_B1 SINE B4 76 172 -52 8 1233 343 294 19 10 chrX 85062198 85062301 -81587995 + PB1D10 SINE Alu 9 112 -5 8 1233 252 319 243 0 chrX 85062546 85062715 -81587581 + Lx8 LINE L1 6908 7117 -356 8 1233 1203 276 101 47 chrX 85062820 85063326 -81586970 + RMER5 LTR ERV1 1 533 -1 8 1233 466 373 107 37 chrX 85063493 85063713 -81586583 + L2 LINE L2 1636 1872 -1547 8 1233 1196 49 0 6 chrX 85063713 85063877 -81586419 + L1Md_F2 LINE L1 6404 6566 -16 8 1233 466 373 107 37 chrX 85063877 85064472 -81585824 + L2 LINE L2 1873 2508 -911 8 1234 186 71 0 0 chrX 85066214 85066242 -81584054 + (T)n Simple_repeat Simple_repeat 1 28 0 8 1234 346 23 0 0 chrX 85066290 85066333 -81583963 - L1_Mus2 LINE L1 -265 6301 6259 8 1234 2063 81 7 7 chrX 85066333 85066631 -81583665 + L1_Mus2 LINE L1 6269 6566 0 8 1234 285 330 0 0 chrX 85066652 85066772 -81583524 + L1_Mur3 LINE L1 5525 5655 -645 8 1234 504 0 0 0 chrX 85067091 85067147 -81583149 + (TG)n Simple_repeat Simple_repeat 2 57 0 9 1234 23 0 0 0 chrX 85067498 85067521 -81582775 + AT_rich Low_complexity Low_complexity 1 23 0 9 1234 567 71 0 0 chrX 85067556 85067641 -81582655 + (TC)n Simple_repeat Simple_repeat 2 86 0 9 1234 402 21 0 0 chrX 85067641 85067687 -81582609 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 1234 493 288 65 0 chrX 85067696 85067835 -81582461 - RSINE1 SINE B4 -6 159 12 9 1234 186 43 0 0 chrX 85068013 85068036 -81582260 + (TTG)n Simple_repeat Simple_repeat 2 24 0 9 1234 25 31 0 0 chrX 85068236 85068268 -81582028 + AT_rich Low_complexity Low_complexity 1 32 0 9 1234 615 349 34 65 chrX 85070964 85071255 -81579041 + MTE2a LTR MaLR 98 379 0 9 1234 6689 125 25 9 chrX 85074849 85075887 -81574409 - Lx LINE L1 -8 6646 5592 9 1234 467 134 0 0 chrX 85075880 85075947 -81574349 + Lx LINE L1 5655 5721 -933 9 1234 237 167 0 0 chrX 85076049 85076103 -81574193 + (CAT)n Simple_repeat Simple_repeat 3 56 0 1 1234 2003 327 67 55 chrX 85077263 85077785 -81572511 + Lx8 LINE L1 6380 6903 -570 1 1234 1136 75 0 7 chrX 85077785 85077933 -81572363 + B1_Mus1 SINE Alu 1 147 -1 1 1234 2003 327 67 55 chrX 85077933 85078492 -81571804 + Lx8 LINE L1 6904 7473 0 1 1234 313 355 164 41 chrX 85078588 85079194 -81571102 - L2a LINE L2 -52 3374 2701 1 1234 4068 193 112 10 chrX 85079210 85079246 -81571050 + L1_Mur3 LINE L1 4781 4827 -1053 1 1234 343 0 0 41 chrX 85079246 85079295 -81571001 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1 1234 4068 193 112 10 chrX 85079295 85080256 -81570040 + L1_Mur3 LINE L1 4828 5880 0 1 1234 5227 264 89 14 chrX 85080228 85081714 -81568582 + Lx6 LINE L1 5855 7452 -8 1 1234 188 67 0 32 chrX 85081723 85081754 -81568542 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 1 1234 1104 311 52 17 chrX 85082326 85082847 -81567449 + L1MC1 LINE L1 5490 6028 -305 1 1234 461 356 20 26 chrX 85083447 85083527 -81566769 + ID SINE ID 1 79 -145 1 1234 218 312 153 20 chrX 85083527 85083625 -81566671 + PB1D10 SINE Alu 1 111 -6 1 1234 468 340 39 68 chrX 85083644 85083849 -81566447 + B4 SINE B4 16 214 -78 1 1234 35273 36 0 0 chrX 85083870 85089573 -81560723 + L1Md_T LINE L1 1 5589 -297 1 1234 8871 8 0 0 chrX 85089573 85090569 -81559727 + L1Md_T LINE L1 5590 6585 0 1 1234 186 71 0 0 chrX 85090712 85090740 -81559556 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 1 1234 398 212 0 56 chrX 85091386 85091511 -81558785 - Lx6 LINE L1 -11 7449 7332 1 1234 300 70 0 0 chrX 85091526 85091569 -81558727 + (GTTTG)n Simple_repeat Simple_repeat 2 44 0 1 1234 1327 79 26 5 chrX 85091576 85091767 -81558529 - L1_Mus1 LINE L1 -240 6327 6133 1 1234 1763 69 4 0 chrX 85091767 85091998 -81558298 + L1_Mus1 LINE L1 6336 6567 0 1 1234 279 0 0 0 chrX 85092016 85092047 -81558249 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1234 324 389 71 14 chrX 85092305 85092516 -81557780 - MLT1H LTR MaLR -293 256 34 1 1234 199 304 0 0 chrX 85092579 85092635 -81557661 - L2 LINE L2 -652 2767 2712 1 1234 540 0 0 0 chrX 85093345 85093405 -81556891 + (TTTTC)n Simple_repeat Simple_repeat 2 61 0 1 1234 1162 137 0 21 chrX 85093405 85093599 -81556697 - Lx2 LINE L1 -23 6974 6785 1 1234 207 0 0 0 chrX 85093638 85093661 -81556635 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1234 22 35 0 0 chrX 85093947 85093976 -81556320 + AT_rich Low_complexity Low_complexity 1 29 0 1 1234 3057 53 5 10 chrX 85094238 85094640 -81555656 + MTB LTR MaLR 1 400 0 1 1234 375 287 46 0 chrX 85094681 85094789 -81555507 - B3 SINE B2 -3 213 101 1 1234 746 269 60 0 chrX 85096125 85096326 -81553970 + B3 SINE B2 2 214 -2 1 1234 27 0 0 0 chrX 85097429 85097456 -81552840 + AT_rich Low_complexity Low_complexity 1 27 0 1 1234 348 305 8 0 chrX 85097940 85098071 -81552225 + L1MA8 LINE L1 6153 6284 -7 1 1234 4253 81 15 19 chrX 85098391 85099007 -81551289 - L1Md_F2 LINE L1 -2 6580 5968 1 1234 290 79 53 63 chrX 85099389 85099484 -81550812 + (TCTCTG)n Simple_repeat Simple_repeat 3 96 0 1 1234 22 94 0 0 chrX 85099914 85099978 -81550318 + AT_rich Low_complexity Low_complexity 1 64 0 1 1234 25 31 0 0 chrX 85100274 85100306 -81549990 + AT_rich Low_complexity Low_complexity 1 32 0 1 1234 271 233 0 0 chrX 85101027 85101087 -81549209 + (TAAA)n Simple_repeat Simple_repeat 2 61 0 1 1234 1142 275 65 25 chrX 85102067 85102515 -81547781 - L1_Mur3 LINE L1 -747 5133 4668 1 1234 782 329 148 16 chrX 85102504 85102999 -81547297 + Lx8 LINE L1 6499 7058 -415 1 1234 21 57 0 0 chrX 85103083 85103118 -81547178 + AT_rich Low_complexity Low_complexity 1 35 0 1 1234 339 191 0 0 chrX 85103272 85103340 -81546956 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 1234 35 24 0 0 chrX 85103877 85103919 -81546377 + AT_rich Low_complexity Low_complexity 1 42 0 1 1234 29 60 0 0 chrX 85104819 85104869 -81545427 + AT_rich Low_complexity Low_complexity 1 50 0 1 1234 7632 139 30 3 chrX 85105052 85107212 -81543084 + Lx LINE L1 4427 6654 0 1 1234 261 0 0 0 chrX 85107249 85107278 -81543018 + (TAA)n Simple_repeat Simple_repeat 3 31 0 1 1234 882 354 68 14 chrX 85107843 85108270 -81542026 + MLT1D LTR MaLR 48 497 -8 1 1234 369 0 0 0 chrX 85108327 85108368 -81541928 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 1 1234 337 171 19 19 chrX 85108469 85108576 -81541720 + (CAGAGA)n Simple_repeat Simple_repeat 2 108 0 1 1234 441 318 276 9 chrX 85108701 85108925 -81541371 + B4A SINE B4 9 292 0 1 1234 313 39 39 0 chrX 85109755 85109806 -81540490 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 1234 433 331 7 15 chrX 85110779 85110914 -81539382 + ID_B1 SINE B4 81 214 -10 1 1234 187 106 42 21 chrX 85110923 85110971 -81539325 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 1 1234 2063 225 135 41 chrX 85113050 85113287 -81537009 - Lx7 LINE L1 0 7696 7436 1 1234 419 74 0 14 chrX 85113287 85113356 -81536940 + (TA)n Simple_repeat Simple_repeat 1 68 0 1 1234 279 0 0 0 chrX 85113356 85113386 -81536910 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 1234 2063 225 135 41 chrX 85113386 85113823 -81536473 - Lx7 LINE L1 -261 7435 6959 1 1234 1989 111 16 13 chrX 85114142 85114191 -81536105 + L1_Mus3 LINE L1 6328 6376 -262 1 1234 279 0 0 0 chrX 85114191 85114222 -81536074 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1234 1989 111 16 13 chrX 85114222 85114481 -81535815 + L1_Mus3 LINE L1 6377 6635 -3 1 1234 530 335 104 38 chrX 85114738 85114874 -81535422 + L1MCb LINE L1 3 137 -5908 1 1234 1068 41 27 20 chrX 85114874 85115024 -81535272 + L1Md_F3 LINE L1 6431 6581 -3 1 1234 530 335 104 38 chrX 85115024 85115387 -81534909 + L1MCb LINE L1 138 535 -5510 1 1234 1304 191 157 71 chrX 85115650 85116000 -81534296 + ORR1C2 LTR MaLR 3 382 -2 1 1234 620 357 80 37 chrX 85116083 85116624 -81533672 + Lx8 LINE L1 6480 7043 -430 1 1234 1254 246 60 6 chrX 85116655 85117006 -81533290 - ORR1D1 LTR MaLR -4 370 1 1 1234 4601 232 70 31 chrX 85117006 85117233 -81533063 - ORR1D1-int LTR MaLR 0 1370 1139 1 1234 597 28 0 0 chrX 85117233 85117304 -81532992 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 1 1234 4601 232 70 31 chrX 85117304 85118391 -81531905 - ORR1D1-int LTR MaLR -232 1138 5 1 1234 1019 232 23 5 chrX 85118391 85118612 -81531684 - ORR1D1 LTR MaLR 0 374 150 1 1234 23 33 0 0 chrX 85122137 85122167 -81528129 + AT_rich Low_complexity Low_complexity 1 30 0 1 1234 267 319 65 40 chrX 85122779 85122903 -81527393 + B3A SINE B2 90 216 0 1 1234 258 297 71 18 chrX 85122899 85123012 -81527284 + MLT1D LTR MaLR 91 209 -296 1 1234 471 345 121 5 chrX 85123040 85123238 -81527058 + MLT1D LTR MaLR 280 500 -5 1 1234 32 43 0 0 chrX 85123926 85123972 -81526324 + AT_rich Low_complexity Low_complexity 1 46 0 1 1234 366 319 0 63 chrX 85123999 85124126 -81526170 - B1F1 SINE Alu -30 119 1 1 1234 702 323 29 52 chrX 85124125 85124468 -81525828 + RLTR18 LTR ERVK 1 335 -281 1 1234 465 303 53 86 chrX 85124496 85124799 -81525497 + RLTR18 LTR ERVK 315 607 -9 1 1234 231 235 0 73 chrX 85125165 85125220 -81525076 + B1_Mur3 SINE Alu 94 144 -5 1 1234 610 213 23 16 chrX 85126216 85126345 -81523951 - B1_Mur1 SINE Alu -7 142 13 1 1234 3574 10 0 0 chrX 85126613 85127009 -81523287 + MTA_Mm LTR MaLR 1 396 0 1 1234 21 57 0 0 chrX 85127571 85127606 -81522690 + AT_rich Low_complexity Low_complexity 1 35 0 1 1234 21 0 0 0 chrX 85127790 85127811 -81522485 + AT_rich Low_complexity Low_complexity 1 21 0 1 1234 331 323 0 10 chrX 85128450 85128547 -81521749 + MLT1C LTR MaLR 362 457 -10 1 1234 376 340 40 59 chrX 85129810 85130032 -81520264 + MLT1D LTR MaLR 13 230 -275 1 1234 217 404 76 13 chrX 85130863 85131021 -81519275 - L3b LINE CR1 -57 425 258 1 1234 433 171 22 22 chrX 85131490 85131670 -81518626 + (TCTCTG)n Simple_repeat Simple_repeat 1 180 0 1 1234 278 239 0 0 chrX 85131670 85131758 -81518538 + (TG)n Simple_repeat Simple_repeat 1 88 0 1 1234 265 215 8 30 chrX 85131758 85131892 -81518404 + CT-rich Low_complexity Low_complexity 2 132 0 1 1234 254 242 45 15 chrX 85131905 85131972 -81518324 - B1_Mus2 SINE Alu -16 131 63 1 1234 337 191 0 0 chrX 85135847 85135910 -81514386 - Lx2B LINE L1 -983 6017 5955 1 1234 745 285 59 26 chrX 85136598 85136901 -81513395 - L1MA9 LINE L1 -34 6278 5966 1 1234 436 311 31 10 chrX 85137994 85138186 -81512110 - Tigger7 DNA MER2_type -1 2490 2295 1 1234 729 343 12 12 chrX 85138307 85138561 -81511735 - Tigger7 DNA MER2_type -2186 305 52 1 1234 288 281 15 117 chrX 85138671 85138808 -81511488 - MTE2a LTR MaLR -1 378 256 1 1234 1482 276 151 76 chrX 85138993 85140103 -81510193 - MTD-int LTR MaLR -5 1253 1 1 1234 389 237 48 82 chrX 85140103 85140250 -81510046 - MTD LTR MaLR 0 419 278 1 1234 2181 75 202 0 chrX 85140494 85140825 -81509471 - MTB LTR MaLR -2 398 1 1 1234 1705 106 51 7 chrX 85140905 85141180 -81509116 + L1_Mus3 LINE L1 6351 6637 -1 1 1234 2922 122 18 0 chrX 85141652 85142101 -81508195 + RLTR33 LTR ERVK 5 461 -217 1 1234 797 345 52 55 chrX 85142421 85142768 -81507528 + MTE2b LTR MaLR 2 347 -32 1 1234 303 329 0 0 chrX 85144534 85144613 -81505683 + Lx8 LINE L1 7172 7250 -223 1 1234 1467 114 0 0 chrX 85144613 85144823 -81505473 - 7SLRNA srpRNA srpRNA -81 233 24 1 1234 4677 73 3 9 chrX 85144823 85145462 -81504834 + L1_Mus1 LINE L1 5927 6561 -6 1 1234 409 200 12 12 chrX 85145740 85145821 -81504475 + RMER17C LTR ERVK 1 81 -329 1 1234 1284 164 40 68 chrX 85145913 85146267 -81504029 + RMER17C LTR ERVK 67 410 0 1 1234 272 311 8 25 chrX 85146661 85146701 -81503595 - BC1_Mm scRNA scRNA -32 120 1 1 1234 357 281 12 0 chrX 85146701 85146783 -81503513 - ID SINE ID -141 83 1 1 1234 2967 178 20 7 chrX 85146979 85147290 -81503006 + RLTR12A LTR ERVK 3 317 -251 1 1234 468 35 0 0 chrX 85147290 85147348 -81502948 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 1234 2967 178 20 7 chrX 85147348 85147591 -81502705 + RLTR12A LTR ERVK 318 564 -4 1 1234 1138 68 0 0 chrX 85147591 85147737 -81502559 + B1_Mm SINE Alu 2 147 0 1 1234 210 71 0 0 chrX 85147737 85147765 -81502531 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 1 1234 7275 115 40 11 chrX 85148082 85149238 -81501058 - Lx2 LINE L1 0 6997 5809 1 1234 277 96 0 0 chrX 85149238 85149282 -81501014 + Lx5 LINE L1 5769 5812 -1196 1 1234 349 282 118 72 chrX 85149402 85149723 -81500573 + LTR37A LTR ERV1 91 426 0 1 1234 488 361 31 65 chrX 85149791 85150052 -81500244 + B4A SINE B4 39 290 -2 2 1234 184 321 122 12 chrX 85151329 85151411 -81498885 - MER5B DNA MER1_type -3 175 85 2 1234 249 357 52 35 chrX 85151466 85151640 -81498656 - MER20 DNA MER1_type -1 218 42 2 1234 2559 35 0 0 chrX 85151994 85152307 -81497989 - L1Md_F3 LINE L1 -12 6572 6260 2 1234 3488 60 0 11 chrX 85152307 85152534 -81497762 + L1_Mm LINE L1 5071 5297 -586 2 1234 852 82 30 0 chrX 85152534 85152669 -81497627 + L1Md_F2 LINE L1 6444 6582 0 2 1234 3488 60 0 11 chrX 85152669 85152898 -81497398 + L1_Mm LINE L1 5298 5522 -361 2 1234 765 306 139 53 chrX 85152898 85153315 -81496981 + MLT1D LTR MaLR 53 505 0 2 1234 22 0 0 0 chrX 85153461 85153483 -81496813 + AT_rich Low_complexity Low_complexity 1 22 0 2 1234 387 309 8 54 chrX 85154155 85154285 -81496011 + MTD LTR MaLR 28 151 -268 2 1234 268 301 75 0 chrX 85154349 85154442 -81495854 + MTD LTR MaLR 265 364 -55 2 1234 28870 180 8 95 chrX 85154609 85155714 -81494582 + L1_Mus2 LINE L1 431 1399 -4484 2 1234 892 142 0 33 chrX 85155714 85155867 -81494429 + B1_Mus1 SINE Alu 1 148 0 2 1234 28870 122 10 17 chrX 85155867 85155916 -81494380 + L1_Mus2 LINE L1 1400 1405 -4478 2 1234 249 33 0 0 chrX 85155916 85155946 -81494350 + (GAAAA)n Simple_repeat Simple_repeat 1 30 0 2 1234 28870 112 13 14 chrX 85155946 85161071 -81489225 + L1_Mus2 LINE L1 1406 6564 -2 2 1234 338 348 61 16 chrX 85161269 85161533 -81488763 + MLT1B LTR MaLR 186 463 -4 2 1234 838 334 102 61 chrX 85162259 85162731 -81487565 + MLT1F2 LTR MaLR 17 507 -53 2 1234 287 333 0 0 chrX 85162900 85162978 -81487318 + ORR1D2 LTR MaLR 9 86 -284 2 1234 334 221 0 0 chrX 85162991 85163059 -81487237 + MTEb LTR MaLR 309 376 -3 2 1234 1682 273 5 29 chrX 85163347 85163621 -81486675 - Lx6 LINE L1 -20 7440 7173 2 1234 3046 188 73 29 chrX 85163621 85164307 -81485989 + RMER6D LTR ERVK 1 716 -4 2 1234 1682 273 5 29 chrX 85164307 85164481 -81485815 - Lx6 LINE L1 -288 7172 7003 2 1234 3329 3 0 0 chrX 85165597 85165972 -81484324 - L1Md_A LINE L1 0 6582 6208 2 1234 448 200 0 17 chrX 85166032 85166149 -81484147 - Lx9 LINE L1 -9 7635 7521 2 1234 278 240 247 27 chrX 85166159 85166309 -81483987 - Lx9 LINE L1 -234 7410 7228 2 1234 247 316 80 21 chrX 85167663 85167951 -81482345 + L1MA5 LINE L1 5959 6263 -37 2 1234 25 31 0 0 chrX 85168113 85168145 -81482151 + AT_rich Low_complexity Low_complexity 1 32 0 2 1234 428 311 15 36 chrX 85168309 85168446 -81481850 + Arthur1A DNA Tip100 42 175 -2 2 1234 3060 121 45 10 chrX 85168860 85169377 -81480919 - Lx LINE L1 -3 6651 6117 2 1234 5442 83 0 1 chrX 85169485 85170207 -81480089 - L1Md_F2 LINE L1 -19 6563 5843 2 1234 39657 38 5 6 chrX 85170780 85177761 -81472535 - L1Md_T LINE L1 0 6582 1 2 1234 24 53 0 0 chrX 85178444 85178482 -81471814 + AT_rich Low_complexity Low_complexity 1 38 0 2 1234 399 98 0 0 chrX 85178832 85178893 -81471403 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1234 422 273 82 15 chrX 85178952 85179086 -81471210 - B1_Mur3 SINE Alu -5 144 2 2 1234 351 389 72 16 chrX 85179106 85179299 -81470997 - B4 SINE B4 -80 212 9 2 1234 512 238 0 0 chrX 85179420 85179525 -81470771 + B3 SINE B2 24 128 -88 2 1234 3023 248 47 44 chrX 85179545 85180653 -81469643 + Lx5 LINE L1 5342 6413 -637 2 1234 384 22 0 0 chrX 85180653 85180698 -81469598 + (TAA)n Simple_repeat Simple_repeat 3 47 0 2 1234 3023 288 57 76 chrX 85180698 85181319 -81468977 + Lx5 LINE L1 6414 7049 -1 2 1234 342 0 0 0 chrX 85181944 85181982 -81468314 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1234 325 288 321 55 chrX 85182022 85182242 -81468054 - B4A SINE B4 -13 279 2 2 1234 503 196 184 0 chrX 85182267 85182494 -81467802 - Lx9 LINE L1 -2 7642 7374 2 1234 6818 137 51 67 chrX 85182840 85183514 -81466782 + RLTR21 LTR ERVK 5 688 -884 2 1234 2417 104 19 68 chrX 85183514 85183938 -81466358 + Lx3B LINE L1 6567 6969 -4 2 1234 6818 165 35 79 chrX 85183938 85185090 -81465206 + RLTR21 LTR ERVK 689 1572 0 2 1234 1112 157 10 5 chrX 85185437 85185636 -81464660 - Lx4A LINE L1 0 7058 6859 2 1234 541 241 9 0 chrX 85185644 85185756 -81464540 - B3 SINE B2 -100 116 4 2 1234 452 136 0 43 chrX 85186334 85186426 -81463870 + Lx LINE L1 6564 6651 -3 2 1234 192 213 0 0 chrX 85186961 85187022 -81463274 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1234 1053 220 63 194 chrX 85187042 85187470 -81462826 + ORR1D1 LTR MaLR 1 372 -2 2 1234 578 347 39 11 chrX 85187875 85188053 -81462243 - B3 SINE B2 -33 183 1 2 1234 886 295 10 10 chrX 85188081 85188290 -81462006 - B3 SINE B2 -7 209 1 2 1234 190 43 0 0 chrX 85188420 85188443 -81461853 - L3 LINE CR1 -4344 145 123 2 1234 1165 320 27 31 chrX 85188727 85189211 -81461085 + Lx9 LINE L1 6939 7420 -224 2 1234 1858 269 128 5 chrX 85189304 85189884 -81460412 + Lx8 LINE L1 6270 6920 -553 2 1234 906 332 63 24 chrX 85189905 85190399 -81459897 + Lx8 LINE L1 6961 7473 0 2 1234 23 0 0 0 chrX 85190399 85190422 -81459874 + AT_rich Low_complexity Low_complexity 1 23 0 2 1234 452 312 116 33 chrX 85190646 85191214 -81459082 + Lx8 LINE L1 6827 7463 -10 2 1234 23 54 0 0 chrX 85191219 85191256 -81459040 + AT_rich Low_complexity Low_complexity 1 37 0 2 1234 553 346 7 0 chrX 85191526 85191679 -81458617 + B3 SINE B2 25 178 -38 2 1234 279 241 65 108 chrX 85192055 85192241 -81458055 - L1MC5 LINE L1 -900 7061 6884 2 1234 180 0 0 0 chrX 85192351 85192371 -81457925 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 1234 386 53 18 0 chrX 85194012 85194069 -81456227 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 1234 225 167 0 0 chrX 85194073 85194127 -81456169 + A-rich Low_complexity Low_complexity 3 56 0 2 1234 289 330 20 26 chrX 85194220 85194443 -81455853 + L1MA4A LINE L1 5818 6035 -265 2 1234 2088 201 16 157 chrX 85195821 85196007 -81454289 + RLTR24 LTR ERV1 3 173 -356 2 1234 3907 30 9 0 chrX 85196007 85196474 -81453822 + L1Md_F3 LINE L1 6113 6583 -1 2 154 2088 201 16 157 chrX 85196474 85196900 -81453396 + RLTR24 LTR ERV1 174 529 0 2 1235 549 0 0 0 chrX 85196974 85197035 -81453261 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 1235 33321 84 10 4 chrX 85197089 85201719 -81448577 - L1Md_F2 LINE L1 0 6582 1967 2 1235 279 0 0 0 chrX 85201719 85201750 -81448546 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1235 33321 109 40 1 chrX 85201750 85203236 -81447060 - L1Md_F2 LINE L1 -3917 1966 386 2 1235 408 20 0 0 chrX 85203382 85203431 -81446865 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1235 336 279 155 14 chrX 85203436 85203643 -81446653 + Lx7 LINE L1 7461 7696 0 2 1235 955 40 42 102 chrX 85204000 85204167 -81446129 - L1Md_F3 LINE L1 0 6584 6428 2 1235 350 351 42 21 chrX 85204217 85204409 -81445887 + L2 LINE L2 2206 2401 -1018 2 1235 4446 122 16 7 chrX 85204586 85205286 -81445010 - L1_Mm LINE L1 0 5883 5178 2 1235 187 366 67 22 chrX 85205341 85205475 -81444821 - L2a LINE L2 -294 3132 2993 2 1235 254 230 80 0 chrX 85205890 85205990 -81444306 - Lx9 LINE L1 -3 7641 7534 2 1235 249 57 0 0 chrX 85207254 85207289 -81443007 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1235 24 0 0 0 chrX 85207729 85207753 -81442543 + AT_rich Low_complexity Low_complexity 1 24 0 2 1235 2312 301 77 29 chrX 85208457 85209294 -81441002 - Lx7 LINE L1 -646 7050 6190 2 1235 189 0 0 0 chrX 85209294 85209315 -81440981 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1235 521 42 14 0 chrX 85209315 85209386 -81440910 + (TA)n Simple_repeat Simple_repeat 1 73 0 2 1235 2312 301 77 29 chrX 85209386 85209486 -81440810 - Lx7 LINE L1 -1507 6189 6068 2 1235 525 307 74 93 chrX 85209550 85209978 -81440318 + Lx7 LINE L1 7039 7471 -2 2 1235 203 240 0 0 chrX 85210018 85210068 -81440228 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1235 263 372 25 8 chrX 85210517 85210639 -81439657 - L2 LINE L2 -433 2986 2863 2 1235 977 261 31 24 chrX 85210646 85211027 -81439269 + L1_Rod LINE L1 5097 5480 -367 2 1235 948 220 33 5 chrX 85211048 85211258 -81439038 + Lx9 LINE L1 6815 7030 -614 2 1235 3987 167 33 21 chrX 85211264 85212122 -81438174 + MusHAL1 LINE L1 448 1315 -1397 2 1235 6016 167 14 1 chrX 85212117 85213233 -81437063 + L1_Mur2 LINE L1 3907 5037 -840 2 1235 2017 264 81 79 chrX 85213224 85213501 -81436795 + Lx2B LINE L1 5646 5881 -773 2 1235 3986 79 19 2 chrX 85213501 85214043 -81436253 + L1_Mus4 LINE L1 6074 6624 -12 2 1235 2752 192 61 25 chrX 85214043 85214739 -81435557 + Lx2B LINE L1 5882 6969 -31 2 1235 258 32 0 0 chrX 85214739 85214770 -81435526 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 2 1235 1300 208 142 13 chrX 85214772 85215308 -81434988 + Lx9 LINE L1 7040 7644 0 2 1235 21 36 0 0 chrX 85215617 85215645 -81434651 + AT_rich Low_complexity Low_complexity 1 28 0 2 1235 24 32 0 0 chrX 85215686 85215717 -81434579 + AT_rich Low_complexity Low_complexity 1 31 0 2 1235 789 11 0 0 chrX 85216297 85216387 -81433909 + (TC)n Simple_repeat Simple_repeat 2 91 0 2 1235 197 108 0 26 chrX 85218475 85218513 -81431783 + (TTCC)n Simple_repeat Simple_repeat 2 38 0 2 1235 346 358 52 0 chrX 85218526 85218660 -81431636 - ID_B1 SINE B4 -4 220 80 2 1235 1151 126 123 18 chrX 85218734 85218953 -81431343 - Lx2A1 LINE L1 0 7008 6767 2 1235 780 305 5 0 chrX 85218966 85219176 -81431120 - B3 SINE B2 -5 211 1 2 1235 1659 102 38 23 chrX 85219211 85219472 -81430824 + Lx3A LINE L1 6708 6972 -9 2 1235 193 250 38 19 chrX 85219565 85219618 -81430678 + MIRc SINE MIR 15 68 -200 2 1235 204 40 0 0 chrX 85219682 85219707 -81430589 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1235 1168 308 34 5 chrX 85219877 85220278 -81430018 + Lx5 LINE L1 6455 6894 -566 2 1235 438 20 0 0 chrX 85220660 85220711 -81429585 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1235 3146 19 0 0 chrX 85220745 85221108 -81429188 - L1Md_F3 LINE L1 -15 6569 6207 2 1235 213 384 0 0 chrX 85221890 85221989 -81428307 + GA-rich Low_complexity Low_complexity 2 100 0 2 1235 410 341 67 5 chrX 85222068 85222277 -81428019 - Lx7 LINE L1 -1885 5811 5590 2 1235 184 154 50 25 chrX 85222760 85222800 -81427496 - MIRm SINE MIR -16 260 220 2 1235 225 173 19 37 chrX 85223767 85223821 -81426475 + RMER15 LTR ERVL 27 79 -496 3 1235 252 152 65 0 chrX 85223846 85223892 -81426404 + RSINE1 SINE B4 77 125 -40 3 1235 252 0 0 0 chrX 85223927 85223955 -81426341 + (TAA)n Simple_repeat Simple_repeat 3 30 0 3 1235 234 283 93 11 chrX 85223977 85224159 -81426137 + L1M2 LINE L1 3038 3234 -2909 3 1235 226 241 0 18 chrX 85225562 85225617 -81424679 - Charlie14a DNA MER1_type -1110 54 1 3 1235 2467 44 16 6 chrX 85225864 85226185 -81424111 + L1Md_F3 LINE L1 6261 6584 0 3 1235 21 0 0 0 chrX 85227065 85227086 -81423210 + AT_rich Low_complexity Low_complexity 1 21 0 3 1235 184 375 27 49 chrX 85228398 85228583 -81421713 + L2a LINE L2 2245 2425 -994 3 1235 341 365 73 76 chrX 85228596 85228978 -81421318 + L2a LINE L2 2505 2885 -534 3 1235 180 338 38 103 chrX 85229024 85229314 -81420982 + L2a LINE L2 3114 3384 -42 3 1235 782 86 0 8 chrX 85229514 85229631 -81420665 + (TA)n Simple_repeat Simple_repeat 1 116 0 3 1235 356 182 15 0 chrX 85230377 85230443 -81419853 - URR1B DNA MER1_type -1 224 158 3 1235 9564 155 32 8 chrX 85231548 85232236 -81418060 - L1_Mur2 LINE L1 -519 5358 4661 3 1235 1008 69 0 0 chrX 85232236 85232366 -81417930 + B1_Mm SINE Alu 2 131 -16 3 1235 9564 155 32 8 chrX 85232366 85233428 -81416868 - L1_Mur2 LINE L1 -1217 4660 3566 3 1235 9142 128 20 14 chrX 85233423 85235046 -81415250 + Lx2A1 LINE L1 5365 6997 -11 3 1235 609 14 0 0 chrX 85236017 85236087 -81414209 + (TC)n Simple_repeat Simple_repeat 1 70 0 3 1235 222 136 0 0 chrX 85236088 85236132 -81414164 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1235 22 0 0 0 chrX 85236504 85236526 -81413770 + AT_rich Low_complexity Low_complexity 1 22 0 3 1235 1084 75 75 0 chrX 85236813 85236972 -81413324 + L1_Mus2 LINE L1 6396 6566 0 3 1235 28 48 0 0 chrX 85237421 85237463 -81412833 + AT_rich Low_complexity Low_complexity 1 42 0 3 1235 407 220 64 0 chrX 85237887 85237996 -81412300 + Lx4B LINE L1 6939 7054 -4 3 1235 206 304 50 113 chrX 85238679 85238820 -81411476 + MIR SINE MIR 79 210 -52 3 1235 21 36 0 0 chrX 85238825 85238853 -81411443 + AT_rich Low_complexity Low_complexity 1 28 0 3 1235 2768 67 6 0 chrX 85238874 85239233 -81411063 - L1_Mus1 LINE L1 -1 6566 6206 3 1235 549 315 2 0 chrX 85239347 85239492 -81410804 - B1_Mur2 SINE Alu 0 149 3 3 1235 12766 54 1 3 chrX 85240555 85242870 -81407426 - L1Md_F2 LINE L1 0 6582 4274 3 1235 7725 61 10 0 chrX 85242866 85244033 -81406263 - L1Md_F2 LINE L1 -1 6581 5404 3 1235 2770 258 61 10 chrX 85244018 85245244 -81405052 + Lx5 LINE L1 5404 6886 -574 3 1235 3951 240 195 49 chrX 85245256 85246978 -81403318 + Lx9 LINE L1 3531 5542 -305 3 1235 261 0 0 0 chrX 85246978 85247007 -81403289 + (TTAA)n Simple_repeat Simple_repeat 1 29 0 3 1235 3951 290 86 28 chrX 85247007 85248025 -81402271 + Lx9 LINE L1 5543 6773 -871 3 1235 9223 191 28 18 chrX 85248616 85250493 -81399803 + Lx6 LINE L1 3844 5738 -139 3 1235 225 0 0 0 chrX 85250493 85250518 -81399778 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 1235 9223 248 35 19 chrX 85250518 85251003 -81399293 + Lx6 LINE L1 5739 6233 -1227 3 1235 249 233 40 40 chrX 85251017 85251093 -81399203 + Lx6 LINE L1 6519 6594 -866 3 1235 1706 265 57 30 chrX 85251068 85251648 -81398648 + Lx6 LINE L1 6469 7430 -30 3 1235 21 57 0 0 chrX 85252759 85252794 -81397502 + AT_rich Low_complexity Low_complexity 1 35 0 3 1235 338 100 0 16 chrX 85252924 85252985 -81397311 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 1235 242 303 11 0 chrX 85253266 85253355 -81396941 + L1MA6 LINE L1 6166 6255 -45 3 1235 375 271 31 20 chrX 85253614 85253712 -81396584 + ID4 SINE ID 5 103 -49 3 1235 21 0 0 0 chrX 85254811 85254832 -81395464 + AT_rich Low_complexity Low_complexity 1 21 0 3 1235 331 74 0 156 chrX 85255057 85255121 -81395175 + L1Md_F2 LINE L1 5532 5585 -298 3 1235 7430 70 1 13 chrX 85255122 85256113 -81394183 + L1Md_F2 LINE L1 5587 6565 -17 3 1235 189 319 42 0 chrX 85258126 85258198 -81392098 - L2a LINE L2 -1 3425 3351 3 1235 19970 58 34 7 chrX 85258619 85261964 -81388332 - L1Md_F3 LINE L1 -1 6583 3135 3 1235 1374 91 0 0 chrX 85261964 85262151 -81388145 - L1_Mus1 LINE L1 -15 6552 6366 3 1235 462 234 35 49 chrX 85262786 85262930 -81387366 + B1_Mus2 SINE Alu 3 144 -3 3 1235 25 0 0 0 chrX 85262954 85262979 -81387317 + AT_rich Low_complexity Low_complexity 1 25 0 3 1235 348 119 0 0 chrX 85262979 85263038 -81387258 + (TG)n Simple_repeat Simple_repeat 1 59 0 3 1235 482 331 27 13 chrX 85263066 85263216 -81387080 - B3A SINE B2 -46 152 1 3 1235 624 372 15 73 chrX 85263637 85263965 -81386331 + MLT1I LTR MaLR 95 403 -8 3 1235 360 311 30 91 chrX 85264612 85264810 -81385486 - MTEb LTR MaLR -11 368 183 3 1235 229 224 0 0 chrX 85264825 85264874 -81385422 - MTEb LTR MaLR -330 49 1 3 1235 238 331 108 47 chrX 85265111 85265390 -81384906 - L2 LINE L2 -1230 2189 1894 3 1235 380 83 0 32 chrX 85265581 85265643 -81384653 + (GAAA)n Simple_repeat Simple_repeat 2 61 0 3 1235 927 133 0 23 chrX 85265654 85265831 -81384465 + GA-rich Low_complexity Low_complexity 4 176 0 3 1235 335 348 11 75 chrX 85265976 85266117 -81384179 + RSINE1 SINE B4 3 135 -30 3 1235 297 37 18 53 chrX 85266117 85266174 -81384122 + (TCTCTG)n Simple_repeat Simple_repeat 6 60 0 3 1235 335 348 11 75 chrX 85266174 85266206 -81384090 + RSINE1 SINE B4 136 165 0 3 1235 25 0 0 0 chrX 85266242 85266267 -81384029 + AT_rich Low_complexity Low_complexity 1 25 0 3 1235 2680 69 58 5 chrX 85266806 85267185 -81383111 + MTB LTR MaLR 2 400 0 3 1235 24 0 0 0 chrX 85267510 85267534 -81382762 + AT_rich Low_complexity Low_complexity 1 24 0 3 1235 22 0 0 0 chrX 85267666 85267688 -81382608 + AT_rich Low_complexity Low_complexity 1 22 0 3 1235 234 152 0 0 chrX 85267979 85268038 -81382258 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 1235 564 278 40 73 chrX 85268319 85268567 -81381729 + B4A SINE B4 6 245 -47 3 1235 5515 81 0 12 chrX 85268651 85269406 -81380890 - L1Md_F2 LINE L1 -3 6579 5834 3 1235 206 358 12 0 chrX 85269408 85269489 -81380807 + (CA)n Simple_repeat Simple_repeat 2 83 0 3 1235 1143 82 0 0 chrX 85269600 85269746 -81380550 + B1_Mm SINE Alu 1 146 -1 3 1235 672 311 79 17 chrX 85269778 85270134 -81380162 + L1MB5 LINE L1 5743 6120 -54 3 1235 730 225 75 4 chrX 85270262 85270490 -81379806 + Lx9 LINE L1 7399 7642 -2 3 1235 486 245 81 10 chrX 85270512 85270703 -81379593 + L1M2 LINE L1 3946 4151 -1989 3 1235 4375 121 73 3 chrX 85270703 85271413 -81378883 + Lx2 LINE L1 6238 6997 0 3 1235 4745 18 2 7 chrX 85271455 85272018 -81378278 + L1Md_A LINE L1 5027 5586 -297 3 1235 8689 17 0 1 chrX 85272018 85273015 -81377281 + L1Md_A LINE L1 5587 6582 0 3 1235 537 293 46 23 chrX 85273065 85273411 -81376885 + L1M2 LINE L1 4201 4554 -1589 3 1235 27 103 0 0 chrX 85274040 85274137 -81376159 + AT_rich Low_complexity Low_complexity 1 97 0 3 1235 1952 19 0 108 chrX 85274157 85274325 -81375971 - L1_Mm LINE L1 -445 5438 5298 3 1235 2829 29 26 3 chrX 85274325 85274670 -81375626 - L1Md_F3 LINE L1 0 6584 6232 3 1235 1952 19 0 108 chrX 85274670 85274789 -81375507 - L1_Mm LINE L1 -586 5297 5182 3 1235 1363 218 61 33 chrX 85274908 85275268 -81375028 + ORR1D1 LTR MaLR 1 370 -4 3 1235 810 309 154 19 chrX 85275435 85275804 -81374492 - MTD LTR MaLR 0 419 1 3 1235 786 174 0 0 chrX 85276480 85276647 -81373649 + GA-rich Low_complexity Low_complexity 1 167 0 3 1235 369 0 0 0 chrX 85280555 85280596 -81369700 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 3 1235 2025 101 17 3 chrX 85280623 85280921 -81369375 - Lx3_Mus LINE L1 -5 7004 6703 3 1235 1310 87 5 5 chrX 85280935 85281120 -81369176 - B2_Mm2 SINE B2 -9 186 2 3 1235 256 187 12 178 chrX 85281120 85281283 -81369013 - Lx3B LINE L1 -9 6964 6829 3 1235 2521 166 27 21 chrX 85281283 85281794 -81368502 - RLTR19-int LTR ERVK -4154 1983 1470 3 1235 290 293 142 19 chrX 85282909 85283121 -81367175 - L1MD1 LINE L1 -311 5931 5694 3 1235 629 68 0 0 chrX 85283662 85283750 -81366546 + L1_Mus2 LINE L1 6477 6564 -2 3 1235 365 281 0 24 chrX 85284780 85284904 -81365392 + MER53 DNA hAT 6 126 -67 3 1235 1196 55 0 0 chrX 85285006 85285151 -81365145 + B1_Mm SINE Alu 2 146 -1 3 1235 309 265 58 19 chrX 85286731 85286835 -81363461 - MER5C1 DNA MER1_type -7 256 149 3 1235 733 264 88 0 chrX 85289077 85289225 -81361071 + B3A SINE B2 2 162 -36 3 1235 666 326 52 81 chrX 85289281 85289738 -81360558 + MT2A LTR ERVL 90 533 0 3 1235 21 57 0 0 chrX 85289776 85289811 -81360485 + AT_rich Low_complexity Low_complexity 1 35 0 3 1235 674 320 25 5 chrX 85291200 85291398 -81358898 + ID_B1 SINE B4 2 203 -21 3 1235 558 149 0 0 chrX 85292741 85292828 -81357468 + L1_Mur1 LINE L1 5035 5121 -765 3 1235 525 32 0 0 chrX 85293120 85293183 -81357113 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 1235 206 189 69 86 chrX 85293606 85293664 -81356632 + MIRc SINE MIR 90 146 -122 3 1235 1313 67 0 11 chrX 85294915 85295097 -81355199 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1235 3602 125 114 47 chrX 85295546 85296250 -81354046 + RMER17A LTR ERVK 1 751 0 3 1235 27 0 0 0 chrX 85296278 85296305 -81353991 + AT_rich Low_complexity Low_complexity 1 27 0 3 1235 3260 68 31 7 chrX 85296351 85296799 -81353497 - L1Md_F2 LINE L1 0 6582 6124 3 1235 397 21 0 0 chrX 85296799 85296847 -81353449 + L1Md_T LINE L1 6106 6153 -429 3 1235 453 296 56 14 chrX 85297183 85297327 -81352969 - B3A SINE B2 -47 151 2 3 1235 231 208 0 20 chrX 85297431 85297480 -81352816 - Cheshire DNA MER1_type -3 2417 2370 3 1235 530 343 42 0 chrX 85297518 85297734 -81352562 - Cheshire DNA MER1_type -2189 231 7 3 1235 182 62 31 0 chrX 85297978 85298010 -81352286 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 3 1235 2062 195 120 83 chrX 85298751 85299416 -81350880 + RMER6C LTR ERVK 1 690 0 3 1235 323 315 40 28 chrX 85300380 85300544 -81349752 - MIR SINE MIR -68 200 31 3 1235 637 259 10 42 chrX 85300730 85300923 -81349373 + Lx4A LINE L1 6870 7056 -2 3 1235 504 237 80 22 chrX 85301240 85301378 -81348918 + B1_Mur3 SINE Alu 1 146 -3 3 1235 261 0 0 0 chrX 85301381 85301410 -81348886 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 1235 530 292 0 45 chrX 85301448 85301602 -81348694 + RSINE1 SINE B4 11 157 -8 4 1235 333 159 0 0 chrX 85301617 85301680 -81348616 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 1235 23 0 0 0 chrX 85301683 85301706 -81348590 + AT_rich Low_complexity Low_complexity 1 23 0 4 1235 242 299 93 0 chrX 85302088 85302195 -81348101 + Lx8 LINE L1 7199 7315 -158 4 1235 270 330 9 19 chrX 85302330 85302435 -81347861 - L2 LINE L2 -940 2479 2376 4 1235 3472 44 7 5 chrX 85304255 85304692 -81345604 + L1Md_A LINE L1 6142 6579 -3 4 1235 1244 355 29 29 chrX 85305654 85306173 -81344123 + MLT1F LTR MaLR 28 546 -2 4 1235 604 250 15 22 chrX 85307635 85307770 -81342526 + B1_Mur1 SINE Alu 16 149 0 4 1235 796 173 6 6 chrX 85307785 85307965 -81342331 + GA-rich Low_complexity Low_complexity 1 180 0 4 1235 34 24 0 0 chrX 85308226 85308267 -81342029 + AT_rich Low_complexity Low_complexity 1 41 0 4 1235 250 270 0 0 chrX 85308295 85308358 -81341938 - Lx7 LINE L1 -442 7254 7192 4 1235 246 62 0 0 chrX 85308530 85308562 -81341734 + (CTAGT)n Simple_repeat Simple_repeat 2 33 0 4 1235 931 209 31 22 chrX 85308688 85308913 -81341383 - Lx4B LINE L1 -1 7057 6831 4 1235 526 298 8 8 chrX 85309532 85309664 -81340632 + RSINE1 SINE B4 4 135 -30 4 1235 489 92 0 0 chrX 85309689 85309765 -81340531 + (TC)n Simple_repeat Simple_repeat 1 76 0 4 1235 22 56 0 0 chrX 85309779 85309815 -81340481 + AT_rich Low_complexity Low_complexity 1 36 0 4 1235 340 346 30 52 chrX 85310563 85310697 -81339599 - ID_B1 SINE B4 -6 218 88 4 1235 1199 303 35 11 chrX 85312403 85312750 -81337546 + MTE2b LTR MaLR 1 355 -24 4 1235 4216 111 2 5 chrX 85312759 85313386 -81336910 + L1_Mus4 LINE L1 6012 6636 0 4 1235 4532 44 2 0 chrX 85313864 85314413 -81335883 - L1Md_T LINE L1 -1 6581 6032 4 1235 32 57 0 0 chrX 85314532 85314585 -81335711 + AT_rich Low_complexity Low_complexity 1 53 0 4 1235 1262 97 16 11 chrX 85314676 85314864 -81335432 - B2_Mm2 SINE B2 -4 191 3 4 1235 1500 28 50 0 chrX 85314976 85315157 -81335139 + B2_Mm1a SINE B2 2 191 -2 4 1235 762 321 58 75 chrX 85315597 85316011 -81334285 + MLT1H LTR MaLR 18 424 -125 4 1235 23 0 0 0 chrX 85317731 85317754 -81332542 + AT_rich Low_complexity Low_complexity 1 23 0 4 1235 22 0 0 0 chrX 85318104 85318126 -81332170 + AT_rich Low_complexity Low_complexity 1 22 0 4 1235 181 250 81 32 chrX 85318752 85318814 -81331482 + L3 LINE CR1 4302 4366 -123 4 1235 836 20 0 10 chrX 85320645 85320748 -81329548 + (TAGA)n Simple_repeat Simple_repeat 3 104 0 4 1235 2176 176 24 40 chrX 85320878 85321304 -81328992 - MTC LTR MaLR 0 421 3 4 1235 7332 90 1 8 chrX 85321415 85322729 -81327567 + L1_Mus2 LINE L1 5259 6564 -2 4 1235 26 0 0 0 chrX 85323417 85323443 -81326853 + AT_rich Low_complexity Low_complexity 1 26 0 4 1235 222 227 37 85 chrX 85323508 85323590 -81326706 + B4 SINE B4 14 91 -201 4 1235 347 293 147 17 chrX 85324631 85324808 -81325488 - Lx8 LINE L1 -16 7457 7258 4 1235 23 0 0 0 chrX 85325007 85325030 -81325266 + AT_rich Low_complexity Low_complexity 1 23 0 4 1235 341 286 136 47 chrX 85325740 85325909 -81324387 - B3A SINE B2 -13 185 2 4 1235 732 305 24 19 chrX 85326113 85326320 -81323976 + B3 SINE B2 9 216 0 4 1235 750 212 27 62 chrX 85326594 85326801 -81323495 + ORR1D1 LTR MaLR 2 205 -173 4 1235 319 49 0 0 chrX 85326801 85326842 -81323454 - L1_Mur1 LINE L1 -1582 4304 4264 4 1235 1872 74 37 7 chrX 85326842 85327114 -81323182 + L1_Mus4 LINE L1 6353 6632 -4 4 1235 703 254 97 0 chrX 85327114 85327299 -81322997 + ORR1D1 LTR MaLR 172 374 0 4 154 2499 225 150 27 chrX 85327299 85328474 -81321822 + ORR1D1-int LTR MaLR 51 1370 0 4 1236 1339 274 14 21 chrX 85328474 85328806 -81321490 + ORR1D1 LTR MaLR 1 303 -71 4 1236 1519 127 0 5 chrX 85328819 85329041 -81321255 - L1_Mur2 LINE L1 -249 5628 5408 4 1236 6369 151 23 19 chrX 85329042 85330159 -81320137 + Lx4A LINE L1 5935 7056 -2 4 1236 352 347 105 29 chrX 85330177 85330349 -81319947 - B4A SINE B4 -69 223 39 4 1236 207 0 0 0 chrX 85330387 85330410 -81319886 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 1236 586 254 114 11 chrX 85330660 85330835 -81319461 - B3A SINE B2 -1 197 5 4 1236 568 153 140 11 chrX 85332727 85332905 -81317391 + Lx9 LINE L1 7443 7643 -1 4 1236 2374 19 0 0 chrX 85332925 85333194 -81317102 - L1Md_T LINE L1 -75 5808 5540 4 1236 6174 39 0 0 chrX 85333194 85333932 -81316364 + L1Md_T LINE L1 5845 6582 0 4 1236 885 19 0 0 chrX 85334763 85334866 -81315430 + (GAA)n Simple_repeat Simple_repeat 1 103 0 4 1236 234 235 0 73 chrX 85335449 85335504 -81314792 + MamSINE1 SINE tRNA 6 56 -234 4 1236 805 257 9 72 chrX 85336059 85336281 -81314015 + B3 SINE B2 8 215 -1 4 1236 320 295 9 28 chrX 85336493 85336601 -81313695 + PB1D10 SINE Alu 12 117 0 4 1236 261 431 75 19 chrX 85337033 85337246 -81313050 + MER115 DNA Tip100 5 229 -464 4 1236 276 307 13 0 chrX 85337530 85337605 -81312691 - MER58A DNA MER1_type -110 114 39 4 1236 393 268 0 47 chrX 85338137 85338223 -81312073 + ID4 SINE ID 2 83 0 4 1236 225 193 33 25 chrX 85338791 85338913 -81311383 + (TAGA)n Simple_repeat Simple_repeat 3 125 0 4 1236 381 246 175 0 chrX 85338966 85339080 -81311216 + MER5A1 DNA MER1_type 33 166 0 4 1236 643 105 0 53 chrX 85340168 85340299 -81309997 + L1Md_F2 LINE L1 6457 6580 -2 4 1236 186 208 0 0 chrX 85342550 85342598 -81307698 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 1236 251 50 0 48 chrX 85342957 85342999 -81307297 + (GAAA)n Simple_repeat Simple_repeat 3 42 0 4 1236 27 49 0 0 chrX 85343108 85343149 -81307147 + AT_rich Low_complexity Low_complexity 1 41 0 4 1236 307 282 128 64 chrX 85343435 85343560 -81306736 - B4A SINE B4 -14 278 146 4 1236 596 364 116 35 chrX 85343610 85344145 -81306151 - L2 LINE L2 -340 3079 2502 4 1236 336 293 39 47 chrX 85344417 85344546 -81305750 + MTD LTR MaLR 20 147 -272 4 1236 378 249 136 30 chrX 85344597 85344728 -81305568 + MTD LTR MaLR 239 405 -14 4 1236 249 297 39 39 chrX 85345020 85345097 -81305199 - MIRb SINE MIR -155 113 37 4 1236 590 314 36 66 chrX 85345596 85345763 -81304533 + RSINE1 SINE B4 3 164 -1 4 1236 360 0 0 0 chrX 85345763 85345803 -81304493 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 4 1236 2473 77 0 0 chrX 85345841 85346153 -81304143 - Lx3_Mus LINE L1 -426 6583 6272 4 1236 1576 81 63 24 chrX 85346153 85346407 -81303889 + Lx3_Mus LINE L1 6738 7001 -8 4 1236 28 71 0 0 chrX 85346407 85346463 -81303833 + AT_rich Low_complexity Low_complexity 1 56 0 4 1236 573 81 0 0 chrX 85346636 85346723 -81303573 - L1_Mus4 LINE L1 -6 6630 6544 4 1236 351 310 20 0 chrX 85349555 85349655 -81300641 - PB1D10 SINE Alu -9 108 7 4 1236 555 266 40 0 chrX 85349859 85349983 -81300313 + RSINE1 SINE B4 4 132 -33 4 1236 471 18 0 0 chrX 85351169 85351225 -81299071 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 1236 284 315 28 9 chrX 85351558 85351667 -81298629 + PB1D10 SINE Alu 1 111 -6 4 1236 262 240 61 20 chrX 85352740 85352838 -81297458 + Lx9 LINE L1 7372 7473 -171 4 1236 447 68 0 0 chrX 85352838 85352897 -81297399 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1236 26 0 0 0 chrX 85353883 85353909 -81296387 + AT_rich Low_complexity Low_complexity 1 26 0 4 1236 921 191 79 5 chrX 85354390 85354579 -81295717 - B3 SINE B2 -9 207 5 4 1236 21 0 0 0 chrX 85354745 85354766 -81295530 + AT_rich Low_complexity Low_complexity 1 21 0 4 1236 369 0 0 0 chrX 85358199 85358240 -81292056 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1236 342 0 0 0 chrX 85360155 85360193 -81290103 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1236 309 312 9 18 chrX 85360607 85360721 -81289575 + GA-rich Low_complexity Low_complexity 2 114 0 4 1236 375 23 0 0 chrX 85361655 85361699 -81288597 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 1236 307 297 17 67 chrX 85362201 85362320 -81287976 - MER5A1 DNA MER1_type -52 114 2 4 1236 385 338 43 14 chrX 85363849 85363987 -81286309 + B1F1 SINE Alu 1 142 -7 4 1236 323 247 13 27 chrX 85365571 85365646 -81284650 - AmnSINE1 SINE SINE -16 559 486 4 1236 650 88 0 19 chrX 85366078 85366182 -81284114 + (GGAA)n Simple_repeat Simple_repeat 3 104 0 4 1236 1060 193 36 14 chrX 85366274 85366495 -81283801 + URR1A DNA MER1_type 1 226 0 4 1236 219 318 36 50 chrX 85367379 85367518 -81282778 - MIR3 SINE MIR -6 202 66 4 1236 205 252 109 133 chrX 85367602 85367730 -81282566 + MIRc SINE MIR 43 167 -101 4 1236 278 365 70 53 chrX 85368163 85368817 -81281479 + L1ME3A LINE L1 5350 6014 -159 4 1236 1074 73 0 0 chrX 85368822 85368958 -81281338 + B1_Mus2 SINE Alu 2 137 -10 4 1236 198 0 0 0 chrX 85368958 85368980 -81281316 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 4 1236 561 380 0 12 chrX 85369154 85369319 -81280977 + RSINE1 SINE B4 3 165 0 4 1236 796 312 21 31 chrX 85369536 85369827 -81280469 + B4A SINE B4 5 292 0 4 1236 286 129 0 31 chrX 85369865 85369929 -81280367 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 1236 427 356 0 0 chrX 85371719 85371882 -81278414 + L1MD2 LINE L1 26 188 -6359 4 1236 751 93 17 0 chrX 85372037 85372155 -81278141 + (TCCC)n Simple_repeat Simple_repeat 1 120 0 4 1236 429 66 0 0 chrX 85372162 85372223 -81278073 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 1236 707 285 19 24 chrX 85372401 85372613 -81277683 + B3 SINE B2 2 212 -4 4 1236 3638 263 81 87 chrX 85372881 85373461 -81276835 - Lx5 LINE L1 -19 7031 6450 4 1236 240 35 0 0 chrX 85373461 85373490 -81276806 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 4 1236 4864 230 71 44 chrX 85373490 85375276 -81275020 - Lx5 LINE L1 -601 6449 4645 4 1236 1554 198 163 43 chrX 85375537 85375954 -81274342 - RMER19B LTR ERVK -435 467 1 5 1236 501 331 82 6 chrX 85375954 85376112 -81274184 - B3 SINE B2 -43 173 4 5 1236 399 41 0 0 chrX 85376487 85376536 -81273760 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1236 495 292 69 0 chrX 85376919 85377063 -81273233 + MER5A1 DNA MER1_type 7 160 -6 5 1236 474 329 80 27 chrX 85377273 85377535 -81272761 - L1MEg LINE L1 -4652 1432 1157 5 1236 387 0 0 0 chrX 85377548 85377591 -81272705 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 1236 300 83 0 0 chrX 85377591 85377638 -81272658 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1236 409 305 20 54 chrX 85377759 85377908 -81272388 - B1F SINE Alu -1 148 5 5 1236 360 0 0 0 chrX 85378183 85378223 -81272073 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 1236 1207 241 63 68 chrX 85378733 85379177 -81271119 - RMER10A LTR ERVL 0 442 1 5 1236 736 117 26 7 chrX 85379230 85379385 -81270911 + (CA)n Simple_repeat Simple_repeat 1 158 0 5 1236 240 35 0 0 chrX 85379450 85379479 -81270817 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1236 698 327 112 53 chrX 85379500 85380123 -81270173 + MER67B LTR ERV1 1 660 -1 5 1236 8993 192 24 35 chrX 85380424 85380694 -81269602 + Lx6 LINE L1 3048 3319 -2561 5 1236 198 0 0 0 chrX 85380694 85380716 -81269580 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 5 1236 8993 192 24 35 chrX 85380716 85382544 -81267752 + Lx6 LINE L1 3320 5122 -758 5 1236 451 288 103 63 chrX 85382554 85382806 -81267490 + RLTR18 LTR ERVK 31 292 -324 5 1236 238 80 20 20 chrX 85382893 85382944 -81267352 + (TTTTTG)n Simple_repeat Simple_repeat 2 52 0 5 1236 1021 111 7 0 chrX 85382950 85383094 -81267202 - B1_Mus2 SINE Alu 0 147 3 5 1236 315 272 112 67 chrX 85383095 85383229 -81267067 + RLTR18B LTR ERVK 234 373 -139 5 1236 4257 66 0 2 chrX 85383366 85383913 -81266383 - L1_Mus2 LINE L1 -433 6133 5588 5 1236 3263 68 32 9 chrX 85383941 85384383 -81265913 + L1_Mus2 LINE L1 6106 6557 -9 5 1236 3714 57 27 0 chrX 85384382 85384860 -81265436 - L1Md_F2 LINE L1 -2 6580 6090 5 1236 7086 211 62 28 chrX 85384904 85386480 -81263816 + Lx6 LINE L1 5117 6749 -711 5 1236 636 14 0 0 chrX 85386480 85386553 -81263743 + (GA)n Simple_repeat Simple_repeat 2 74 0 5 1236 7086 225 67 36 chrX 85386553 85387191 -81263105 + Lx6 LINE L1 6750 7412 -48 5 1236 348 345 41 5 chrX 85388262 85388457 -81261839 + MIRb SINE MIR 50 251 -17 5 1236 5855 148 64 15 chrX 85388706 85389759 -81260537 - Lx4A LINE L1 0 7058 5955 5 1236 4074 120 123 68 chrX 85389759 85390542 -81259754 - L1Md_F2 LINE L1 0 6582 5748 5 1236 1137 54 0 20 chrX 85390542 85390692 -81259604 - B1_Mus1 SINE Alu 0 148 2 5 1236 4074 120 123 68 chrX 85390692 85390746 -81259550 - L1Md_F2 LINE L1 -835 5747 5699 5 1236 561 316 41 0 chrX 85390750 85390946 -81259350 - B3 SINE B2 -12 204 1 5 1236 529 351 74 5 chrX 85390949 85391152 -81259144 - B4 SINE B4 -66 226 10 5 1236 307 381 75 18 chrX 85392135 85392362 -81257934 + LTR16C LTR ERVL 229 468 -21 5 1236 572 326 53 18 chrX 85393117 85393398 -81256898 + HERV16-int LTR ERVL 941 1231 -3765 5 1236 345 341 86 16 chrX 85393396 85393664 -81256632 + ERVL-int LTR ERVL 3429 3719 -1948 5 1236 825 318 125 25 chrX 85394191 85394639 -81255657 - MLT1D LTR MaLR 0 505 13 5 1236 198 0 0 0 chrX 85394819 85394841 -81255455 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 5 1236 377 280 36 96 chrX 85394841 85395007 -81255289 - Lx5 LINE L1 -20 7030 6875 5 1236 29170 90 58 39 chrX 85395554 85399408 -81250888 + L1Md_F2 LINE L1 407 4650 -1233 5 1236 1030 116 0 7 chrX 85399408 85399556 -81250740 + B1_Mm SINE Alu 1 147 0 5 1236 29170 81 69 35 chrX 85399556 85400657 -81249639 + L1Md_F2 LINE L1 4651 5700 -183 5 1236 3055 34 158 2 chrX 85400657 85401068 -81249228 - IAPLTR2_Mm LTR ERVK 0 475 1 5 1236 29170 82 15 17 chrX 85401068 85401934 -81248362 + L1Md_F2 LINE L1 5701 6555 -27 5 1236 969 248 11 154 chrX 85401934 85402387 -81247909 - RMER17C LTR ERVK -9 401 14 5 1236 245 320 10 10 chrX 85402775 85402876 -81247420 + MIRb SINE MIR 109 209 -59 5 1236 348 83 0 0 chrX 85403344 85403392 -81246904 + (A)n Simple_repeat Simple_repeat 1 48 0 5 1236 3423 144 23 0 chrX 85404207 85404736 -81245560 + Lx4A LINE L1 6121 6661 -397 5 1236 672 271 45 50 chrX 85404740 85404961 -81245335 - RMER15 LTR ERVL -99 476 257 5 1236 3381 296 36 37 chrX 85404980 85406259 -81244037 - RMER15-int LTR ERVL -3715 1284 7 5 1236 645 310 51 32 chrX 85406276 85406303 -81243993 - RMER15 LTR ERVL -16 559 537 5 1236 423 0 0 0 chrX 85406303 85406350 -81243946 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1236 645 310 51 32 chrX 85406350 85406575 -81243721 - RMER15 LTR ERVL -39 536 302 5 1236 24 0 0 0 chrX 85407047 85407071 -81243225 + AT_rich Low_complexity Low_complexity 1 24 0 5 1236 219 36 0 0 chrX 85407152 85407180 -81243116 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 5 1236 340 314 34 23 chrX 85407384 85407513 -81242783 - PB1D9 SINE Alu -13 136 5 5 1236 1845 242 5 32 chrX 85407546 85407956 -81242340 - Lx6 LINE L1 -173 7287 6889 5 1236 229 318 37 79 chrX 85407964 85408128 -81242168 - RMER10B LTR ERVL 0 398 242 5 1236 1263 188 44 0 chrX 85408382 85408611 -81241685 - Lx6 LINE L1 -582 6878 6640 5 1236 2726 43 43 70 chrX 85408612 85409011 -81241285 - RLTR10 LTR ERVK -2 388 1 5 1236 2345 267 53 31 chrX 85409033 85409783 -81240513 + Lx6 LINE L1 5816 6582 -878 5 1236 738 155 15 8 chrX 85409820 85409950 -81240346 + URR1B DNA MER1_type 95 225 0 5 1236 621 0 0 0 chrX 85412343 85412412 -81237884 + (GAA)n Simple_repeat Simple_repeat 1 69 0 5 1236 3092 77 2 9 chrX 85412731 85413161 -81237135 - L1Md_F2 LINE L1 -3 6579 6153 5 1236 411 314 40 46 chrX 85413253 85413286 -81237010 + L1MB4 LINE L1 5751 5783 -397 5 1236 339 78 0 0 chrX 85413286 85413337 -81236959 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1236 411 314 40 46 chrX 85413337 85413607 -81236689 + L1MB4 LINE L1 5784 6052 -128 5 1236 573 226 23 24 chrX 85413731 85413868 -81236428 - ID_B1 SINE B4 -49 243 104 5 1236 285 29 0 0 chrX 85414044 85414078 -81236218 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 1236 578 328 41 16 chrX 85414393 85414635 -81235661 + Lx8 LINE L1 7154 7401 -72 5 1236 22 56 0 0 chrX 85414733 85414769 -81235527 + AT_rich Low_complexity Low_complexity 1 36 0 5 1236 426 241 0 5 chrX 85414838 85414938 -81235358 + ID4_ SINE ID 8 105 -47 5 1236 439 209 9 9 chrX 85416501 85416617 -81233679 + CT-rich Low_complexity Low_complexity 1 116 0 5 1236 276 30 0 0 chrX 85416814 85416847 -81233449 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 1236 306 134 0 0 chrX 85416941 85417008 -81233288 + (A)n Simple_repeat Simple_repeat 1 67 0 5 1236 239 93 0 23 chrX 85417078 85417122 -81233174 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1236 428 300 65 20 chrX 85417245 85417398 -81232898 - MIRc SINE MIR -107 161 2 5 1236 21 0 0 0 chrX 85417925 85417946 -81232350 + AT_rich Low_complexity Low_complexity 1 21 0 5 1236 348 367 72 8 chrX 85418444 85418694 -81231602 + LTR82B Low_complexity ERVL 96 361 -469 5 1236 303 354 63 38 chrX 85418773 85418956 -81231340 + LTR82B Low_complexity ERVL 484 669 -161 5 1236 1156 274 62 55 chrX 85418956 85419520 -81230776 - MER34A LTR ERV1 -3 568 1 5 1236 303 354 63 38 chrX 85419520 85419574 -81230722 + LTR82B Low_complexity ERVL 670 726 -104 5 1236 781 288 73 65 chrX 85419849 85420261 -81230035 - MLT1C LTR MaLR 0 467 53 5 1236 198 103 0 0 chrX 85420350 85420379 -81229917 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 1236 250 266 153 35 chrX 85420405 85420549 -81229747 - Lx6 LINE L1 -26 7434 7274 5 1236 3772 75 9 24 chrX 85420570 85421103 -81229193 + L1_Mus3 LINE L1 6112 6636 -2 5 1236 1512 260 92 36 chrX 85421119 85421620 -81228676 + RMER20B LTR ERVK 22 606 -21 5 1236 623 343 63 22 chrX 85421945 85422261 -81228035 + Lx8 LINE L1 7137 7465 -8 5 1236 1195 201 3 39 chrX 85422262 85422567 -81227729 - Lx5 LINE L1 -989 4891 4598 5 1236 400 221 11 0 chrX 85422569 85422664 -81227632 + Lx5 LINE L1 4905 5000 -886 5 1236 9957 145 45 16 chrX 85422668 85424284 -81226012 + L1VL1 LINE L1 191 1865 -1833 5 1236 255 31 0 0 chrX 85424284 85424316 -81225980 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 1236 9957 123 11 2 chrX 85424316 85425060 -81225236 + L1VL1 LINE L1 1866 2611 -1087 5 1236 31622 79 3 13 chrX 85425059 85429973 -81220323 + L1Md_F2 LINE L1 723 5586 -297 5 1236 7608 71 0 0 chrX 85429973 85430992 -81219304 + L1Md_F2 LINE L1 5587 6582 0 5 1236 3945 123 24 5 chrX 85430994 85431405 -81218891 + L1_Mus3 LINE L1 6002 6419 -219 5 1236 216 0 0 0 chrX 85431405 85431429 -81218867 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 1236 3945 123 24 5 chrX 85431429 85431638 -81218658 + L1_Mus3 LINE L1 6420 6632 -6 5 1236 4296 205 65 6 chrX 85431641 85432884 -81217412 + Lx5 LINE L1 4981 6331 -719 5 1236 1173 318 85 29 chrX 85432907 85433422 -81216874 + Lx5 LINE L1 6506 7049 -1 5 1236 34 0 0 0 chrX 85433422 85433456 -81216840 + AT_rich Low_complexity Low_complexity 1 34 0 5 1236 21 0 0 0 chrX 85433892 85433913 -81216383 + AT_rich Low_complexity Low_complexity 1 21 0 5 1236 428 196 67 0 chrX 85434391 85434548 -81215748 + L1M2 LINE L1 4357 4529 -1617 5 1236 1412 96 9 18 chrX 85435246 85435469 -81214827 + L1_Mus2 LINE L1 6346 6566 0 5 1236 27 73 0 0 chrX 85435483 85435538 -81214758 + AT_rich Low_complexity Low_complexity 1 55 0 5 1236 584 259 33 39 chrX 85436174 85436355 -81213941 - B3 SINE B2 0 216 37 5 1236 2734 106 8 2 chrX 85436361 85436759 -81213537 - L1_Mus2 LINE L1 0 6566 6167 5 1236 260 402 0 12 chrX 85436823 85436984 -81213312 + Tigger10 DNA Tigger 429 587 -1256 5 1236 213 39 0 0 chrX 85437392 85437418 -81212878 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 5 1236 213 146 0 0 chrX 85437610 85437658 -81212638 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 1236 240 235 14 29 chrX 85437679 85437749 -81212547 + CT-rich Low_complexity Low_complexity 1 69 0 5 1236 183 42 0 0 chrX 85437763 85437787 -81212509 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 1236 465 99 0 0 chrX 85437787 85437868 -81212428 + (GA)n Simple_repeat Simple_repeat 2 82 0 5 1236 643 118 0 0 chrX 85437955 85438048 -81212248 + U6 snRNA snRNA 1 93 -14 5 1236 1048 242 33 29 chrX 85438057 85438299 -81211997 + Lx5 LINE L1 6803 7045 -5 5 1236 1244 89 0 6 chrX 85438326 85438507 -81211789 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 1236 820 163 7 14 chrX 85438520 85438648 -81211648 + B1_Mus1 SINE Alu 7 135 -13 5 1236 309 51 0 0 chrX 85438648 85438687 -81211609 + (CAAAA)n Simple_repeat Simple_repeat 1 39 0 6 1236 820 163 7 14 chrX 85438687 85438701 -81211595 + B1_Mus1 SINE Alu 136 148 0 5 1236 938 172 70 0 chrX 85438712 85438898 -81211398 + Lx3C LINE L1 5806 6004 -977 6 1236 22 0 0 0 chrX 85439010 85439032 -81211264 + AT_rich Low_complexity Low_complexity 1 22 0 6 1236 232 327 0 0 chrX 85439275 85439327 -81210969 - RSINE1 SINE B4 -21 144 93 6 1236 309 109 0 0 chrX 85440116 85440162 -81210134 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 1236 23577 79 6 9 chrX 85440460 85444674 -81205622 + L1Md_F LINE L1 387 4603 -1280 6 1236 476 171 0 0 chrX 85444674 85444756 -81205540 - L1_Mur1 LINE L1 -919 4967 4886 6 1236 245 174 0 0 chrX 85444755 85444801 -81205495 + Lx3C LINE L1 6379 6424 -552 6 1236 1003 206 67 8 chrX 85444798 85445038 -81205258 + Lx3C LINE L1 6723 6976 0 6 1236 276 77 0 0 chrX 85445236 85445275 -81205021 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 6 1236 268 330 141 6 chrX 85445276 85445453 -81204843 - B3 SINE B2 -12 204 4 6 1236 473 282 55 126 chrX 85445494 85445828 -81204468 - L1_Mur3 LINE L1 -730 5567 5266 6 1236 311 307 79 0 chrX 85445980 85446094 -81204202 + B3 SINE B2 1 123 -93 6 1236 434 66 0 0 chrX 85446101 85446162 -81204134 + L1_Mus2 LINE L1 6506 6566 0 6 1236 333 47 0 0 chrX 85446248 85446291 -81204005 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1236 435 38 0 0 chrX 85446932 85446985 -81203311 + (T)n Simple_repeat Simple_repeat 1 53 0 6 1236 23 33 0 0 chrX 85447342 85447372 -81202924 + AT_rich Low_complexity Low_complexity 1 30 0 6 1236 1294 244 64 3 chrX 85449988 85450333 -81199963 + ORR1D2 LTR MaLR 1 366 -4 6 1236 24 77 0 0 chrX 85450436 85450488 -81199808 + AT_rich Low_complexity Low_complexity 1 52 0 6 1236 505 386 6 0 chrX 85450496 85450654 -81199642 - RSINE1 SINE B4 -2 163 5 6 1236 29 0 0 0 chrX 85450656 85450685 -81199611 + AT_rich Low_complexity Low_complexity 1 29 0 6 1236 22 0 0 0 chrX 85450828 85450850 -81199446 + AT_rich Low_complexity Low_complexity 1 22 0 6 1236 23 0 0 0 chrX 85450968 85450991 -81199305 + AT_rich Low_complexity Low_complexity 1 23 0 6 1236 1892 241 6 155 chrX 85451328 85452044 -81198252 + RMER19C LTR ERVK 3 611 0 6 1236 2518 81 64 0 chrX 85452241 85452601 -81197695 - Lx3B LINE L1 -386 6587 6205 6 1236 2211 113 15 6 chrX 85452602 85452939 -81197357 + Lx3B LINE L1 6633 6972 -1 6 1236 751 61 20 0 chrX 85453034 85453133 -81197163 + B1_Mus2 SINE Alu 42 142 -5 6 1236 583 305 5 21 chrX 85453235 85453426 -81196870 + B3A SINE B2 1 188 -10 6 1236 389 237 131 20 chrX 85453434 85453533 -81196763 - PB1D9 SINE Alu -5 115 6 6 1236 237 277 0 97 chrX 85453469 85453541 -81196755 - MT2B LTR ERVL -375 226 162 6 1236 313 178 65 22 chrX 85453764 85453856 -81196440 - Lx2 LINE L1 0 6997 6902 6 1236 228 307 44 33 chrX 85454898 85454989 -81195307 + MER117 DNA MER1_type 53 144 -53 6 1236 264 301 55 20 chrX 85455249 85455395 -81194901 + L1M5 LINE L1 5645 5795 -445 6 1236 296 280 102 36 chrX 85456001 85456035 -81194261 - ORR1D2 LTR MaLR 0 370 329 6 1236 183 80 0 0 chrX 85456035 85456060 -81194236 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 6 1236 296 280 102 36 chrX 85456060 85456162 -81194134 - ORR1D2 LTR MaLR -42 328 225 6 1236 1792 208 200 58 chrX 85456168 85456916 -81193380 + RMER6C LTR ERVK 8 715 -5 6 1236 257 343 70 0 chrX 85456933 85457048 -81193248 - ORR1D2 LTR MaLR -148 222 92 6 1236 1528 291 28 24 chrX 85457049 85457475 -81192821 - ORR1D2-int LTR MaLR -170 1200 773 6 1236 1166 218 4 9 chrX 85457479 85457706 -81192590 - MTC LTR MaLR -6 415 190 6 1236 27 0 0 0 chrX 85457706 85457733 -81192563 + AT_rich Low_complexity Low_complexity 1 27 0 6 1236 2011 93 11 7 chrX 85457874 85458157 -81192139 - L1Md_F2 LINE L1 -159 6423 6140 6 1236 2754 30 3 0 chrX 85458161 85458498 -81191798 - ORR1A0 LTR MaLR -8 338 1 6 154 4740 74 27 3 chrX 85458498 85459346 -81190950 - L1Md_F2 LINE L1 -438 6144 5247 6 1237 425 97 56 0 chrX 85459340 85459412 -81190884 - L1_Mus1 LINE L1 -579 5988 5913 6 1237 6523 26 1 4 chrX 85459562 85460333 -81189963 + L1Md_F3 LINE L1 5799 6567 -17 6 1237 4019 131 93 55 chrX 85460346 85461219 -81189077 - RMER17A2 LTR ERVK 0 906 1 6 1237 515 56 14 0 chrX 85461225 85461296 -81189000 + (TA)n Simple_repeat Simple_repeat 1 72 0 6 1237 525 358 60 28 chrX 85462557 85462839 -81187457 + B4A SINE B4 1 291 -1 6 1237 515 158 8 0 chrX 85462898 85463025 -81187271 + CT-rich Low_complexity Low_complexity 1 128 0 6 1237 244 316 13 0 chrX 85464266 85464345 -81185951 - ID2 SINE ID -1 82 3 6 1237 349 327 9 53 chrX 85464556 85464669 -81185627 - RSINE1 SINE B4 -2 163 56 6 1237 1204 121 20 5 chrX 85464826 85465025 -81185271 - L1_Mus3 LINE L1 -3 6635 6434 6 1237 6825 133 27 3 chrX 85465327 85466866 -81183430 + Lx LINE L1 5074 6651 -3 6 1237 391 333 89 21 chrX 85467398 85467634 -81182662 + MLT1L LTR MaLR 315 566 -44 6 1237 396 0 0 0 chrX 85467904 85467948 -81182348 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 1237 375 23 0 0 chrX 85467948 85467991 -81182305 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1237 295 304 43 11 chrX 85468063 85468156 -81182140 + RCHARR1 DNA MER1_type 199 294 -680 6 1237 6221 95 13 19 chrX 85468167 85469084 -81181212 + Lx3_Mus LINE L1 6078 6989 -20 6 1237 279 0 0 0 chrX 85469084 85469115 -81181181 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 6 1237 6221 95 13 19 chrX 85469115 85469135 -81181161 + Lx3_Mus LINE L1 6990 7009 0 6 1237 851 156 6 18 chrX 85469416 85469586 -81180710 - Lx LINE L1 -8 6646 6479 6 1237 480 120 40 64 chrX 85470200 85470325 -81179971 - L1Md_F3 LINE L1 0 6584 6463 6 1237 305 307 11 64 chrX 85470860 85470954 -81179342 + B3 SINE B2 14 102 -114 6 1237 27 0 0 0 chrX 85471641 85471668 -81178628 + AT_rich Low_complexity Low_complexity 1 27 0 6 1237 733 231 6 13 chrX 85472705 85472863 -81177433 + RSINE1 SINE B4 3 159 -6 6 1237 263 28 28 0 chrX 85473057 85473093 -81177203 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 1237 224 303 26 13 chrX 85473183 85473260 -81177036 - ID SINE ID -142 82 5 6 1237 249 233 33 22 chrX 85473667 85473759 -81176537 + (TATG)n Simple_repeat Simple_repeat 4 96 0 6 1237 614 357 0 0 chrX 85473861 85474043 -81176253 - B4A SINE B4 -38 254 73 6 1237 611 310 61 0 chrX 85474549 85474746 -81175550 - B3 SINE B2 -7 209 1 6 1237 27 73 0 0 chrX 85475211 85475266 -81175030 + AT_rich Low_complexity Low_complexity 1 55 0 6 1237 37878 43 2 2 chrX 85475477 85481658 -81168638 - L1Md_T LINE L1 0 6585 312 6 1237 910 247 137 35 chrX 85482574 85483079 -81167217 + L1MDb LINE L1 986 1565 -5068 6 1237 260 276 151 22 chrX 85483099 85483284 -81167012 + L1MDb LINE L1 2957 3165 -3372 6 1237 345 24 0 0 chrX 85483307 85483349 -81166947 + (TC)n Simple_repeat Simple_repeat 1 42 0 6 1237 342 80 0 0 chrX 85483349 85483398 -81166898 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1237 706 182 0 27 chrX 85483558 85483705 -81166591 + B1_Mur3 SINE Alu 6 148 -1 6 1237 1018 176 21 5 chrX 85483888 85484076 -81166220 - Lx3C LINE L1 -321 6655 6465 6 1237 731 300 84 76 chrX 85484079 85484576 -81165720 + L1MB7 LINE L1 5520 6022 -162 6 1237 620 322 0 5 chrX 85484576 85484776 -81165520 - B3 SINE B2 -17 199 1 6 1237 731 300 84 76 chrX 85484776 85484898 -81165398 + L1MB7 LINE L1 6023 6144 -40 6 1237 220 314 65 28 chrX 85485973 85486081 -81164215 + MIRb SINE MIR 50 161 -107 6 1237 331 334 6 0 chrX 85486090 85486194 -81164102 + B1F SINE Alu 1 109 -11 6 1237 556 333 20 0 chrX 85486536 85486683 -81163613 - RSINE1 SINE B4 -10 155 6 6 1237 417 214 0 0 chrX 85487246 85487349 -81162947 + (TG)n Simple_repeat Simple_repeat 1 103 0 6 1237 1575 54 0 10 chrX 85487727 85487933 -81162363 + L1Md_T LINE L1 6379 6582 0 6 1237 336 343 81 46 chrX 85488121 85488295 -81162001 - B4A SINE B4 -4 288 109 6 1237 1382 289 30 20 chrX 85488536 85488974 -81161322 - Lx6 LINE L1 -38 7422 6981 6 1237 823 204 47 0 chrX 85488983 85489194 -81161102 + MusHAL1 LINE L1 1837 2057 -655 6 1237 20257 56 2 6 chrX 85489191 85492695 -81157601 + L1Md_Gf LINE L1 264 3850 -2036 6 1237 385 42 0 0 chrX 85492692 85492740 -81157556 - L1Md_F3 LINE L1 -501 6083 6036 6 1237 5479 167 37 25 chrX 85492744 85493801 -81156495 - MYSERV6-int LTR ERVK -7886 1073 4 6 1237 1109 136 22 5 chrX 85493801 85493986 -81156310 - B2_Mm2 SINE B2 -7 188 1 6 1237 2201 175 51 42 chrX 85493998 85494452 -81155844 - RMER6B LTR ERVK -3 458 1 6 1237 2396 225 74 111 chrX 85494470 85495445 -81154851 + L1VL2 LINE L1 9 785 -5550 6 1237 14585 168 83 16 chrX 85495442 85498529 -81151767 + L1_Mur1 LINE L1 2270 5561 -325 6 1237 297 68 0 0 chrX 85498537 85498581 -81151715 + (CATA)n Simple_repeat Simple_repeat 3 46 0 6 1237 557 216 149 69 chrX 85498797 85498971 -81151325 + Lx7 LINE L1 6678 6865 -831 6 1237 253 335 78 50 chrX 85499462 85499641 -81150655 - MLT1E2 LTR MaLR -443 184 1 6 1237 608 214 16 126 chrX 85499818 85500000 -81150296 + L1VL1 LINE L1 214 375 -6047 6 1237 6804 149 17 14 chrX 85500003 85502068 -81148228 + L1VL1 LINE L1 595 2673 -3213 1 1237 15475 112 4 17 chrX 85502064 85504572 -81145724 + L1_Mm LINE L1 3220 5695 -188 2 1237 3984 52 0 20 chrX 85504577 85505084 -81145212 + L1Md_F2 LINE L1 6073 6569 -13 3 1237 33 25 0 0 chrX 85505084 85505124 -81145172 + AT_rich Low_complexity Low_complexity 1 40 0 4 1237 348 175 16 0 chrX 85505124 85505187 -81145109 + RMER6B LTR ERVK 398 461 0 5 1237 225 94 0 0 chrX 85505275 85505307 -81144989 + (CATATA)n Simple_repeat Simple_repeat 5 36 0 6 1237 524 35 46 11 chrX 85505331 85505418 -81144878 + (TCTA)n Simple_repeat Simple_repeat 4 93 0 7 1237 2494 98 56 3 chrX 85505440 85505801 -81144495 - MTB LTR MaLR 0 400 21 8 1237 846 20 0 0 chrX 85505801 85505901 -81144395 + (CA)n Simple_repeat Simple_repeat 1 100 0 9 1237 2494 98 56 3 chrX 85505901 85505917 -81144379 - MTB LTR MaLR -380 20 4 8 1237 1574 218 40 79 chrX 85505918 85506193 -81144103 - L1_Mur3 LINE L1 -678 5202 4937 1 1237 358 204 298 9 chrX 85506193 85506296 -81144000 + B1_Mus1 SINE Alu 2 138 -10 1 1237 207 0 0 0 chrX 85506296 85506319 -81143977 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 1237 1574 218 40 79 chrX 85506329 85506597 -81143699 - L1_Mur3 LINE L1 -944 4936 4680 1 1237 775 258 65 42 chrX 85506597 85506933 -81143363 + RMER17C LTR ERVK 1 344 -66 1 1237 264 164 14 43 chrX 85506968 85507038 -81143258 - L1_Mur3 LINE L1 -1196 4684 4617 1 1237 1350 152 266 5 chrX 85507056 85507466 -81142830 - L1_Mur3 LINE L1 -1227 4653 4137 1 1237 6825 81 1 8 chrX 85508236 85509207 -81141089 - L1Md_F2 LINE L1 -3 6579 5616 1 1237 2857 60 0 32 chrX 85509207 85509584 -81140712 - RLTR10B2 LTR ERVK 0 365 1 1 1237 3825 125 11 1 chrX 85509584 85510264 -81140032 - IAPEY3-int LTR ERVK 0 7680 6965 1 1237 1018 136 125 0 chrX 85510264 85510448 -81139848 - IAP-d-int LTR ERVK -1287 5255 5049 1 1237 29538 100 12 0 chrX 85510453 85515633 -81134663 - L1Md_F2 LINE L1 -947 5635 392 1 1237 4657 192 22 22 chrX 85515634 85515950 -81134346 - L1_Mur3 LINE L1 -1721 4159 3851 1 1237 207 0 0 0 chrX 85515950 85515973 -81134323 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1237 4657 192 22 22 chrX 85515973 85516803 -81133493 - L1_Mur3 LINE L1 -2030 3850 3014 1 1237 813 321 53 108 chrX 85516808 85517427 -81132869 - RLTR18 LTR ERVK -3 613 29 1 1237 2683 182 36 83 chrX 85517445 85518103 -81132193 - L1_Mur3 LINE L1 -2863 3017 2398 1 1237 488 245 212 29 chrX 85518103 85518414 -81131882 - RLTR9A LTR ERVK 0 368 1 1 1237 2683 182 36 83 chrX 85518414 85518569 -81131727 - L1_Mur3 LINE L1 -3483 2397 2243 1 1237 1966 190 7 0 chrX 85518664 85519096 -81131200 + Lx3C LINE L1 2884 3318 -2568 2 1237 351 0 0 0 chrX 85519385 85519424 -81130872 + (TTA)n Simple_repeat Simple_repeat 1 39 0 2 1237 10328 182 19 92 chrX 85519429 85519995 -81130301 + Lx3C LINE L1 3314 3871 -2015 2 1237 2768 25 6 3 chrX 85519995 85520321 -81129975 - IAPLTR2b LTR ERVK 0 327 1 2 1237 10328 182 19 92 chrX 85520321 85521081 -81129215 + Lx3C LINE L1 3872 4629 -1257 2 1237 207 0 0 0 chrX 85521081 85521104 -81129192 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1237 10328 182 19 92 chrX 85521104 85521210 -81129086 + Lx3C LINE L1 4630 4735 -1151 2 1237 256 64 43 0 chrX 85521210 85521257 -81129039 + (CAA)n Simple_repeat Simple_repeat 2 50 0 2 1237 10328 182 19 92 chrX 85521257 85521725 -81128571 + Lx3C LINE L1 4736 5209 -677 2 1237 369 0 0 0 chrX 85521725 85521766 -81128530 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1237 10328 182 19 92 chrX 85521766 85522111 -81128185 + Lx3C LINE L1 5210 5370 -516 2 1237 336 48 0 0 chrX 85522111 85522153 -81128143 + (GA)n Simple_repeat Simple_repeat 2 43 0 2 1237 474 18 0 0 chrX 85522162 85522217 -81128079 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 1237 10328 190 14 34 chrX 85522217 85523613 -81126683 + Lx3C LINE L1 5371 6771 -205 2 1237 8329 117 5 1 chrX 85523613 85525108 -81125188 - L1VL1 LINE L1 -3278 2605 1104 2 1237 24268 101 12 8 chrX 85525166 85529725 -81120571 - L1Md_F LINE L1 -936 4947 372 2 1237 2358 210 82 37 chrX 85529724 85530478 -81119818 - L1Md_F LINE L1 -5496 1023 32 3 1237 694 304 2 80 chrX 85530481 85530814 -81119482 - L1VL1 LINE L1 -5933 485 4 3 1237 209 344 0 15 chrX 85530934 85530999 -81119297 - MER5B DNA MER1_type -57 121 58 3 1237 1788 88 16 4 chrX 85531476 85531728 -81118568 + L1_Mus1 LINE L1 6313 6567 0 3 1237 391 315 6 18 chrX 85532023 85532191 -81118105 + L1MC4 LINE L1 6783 6948 -1094 3 1237 1991 261 18 11 chrX 85532193 85532844 -81117452 + L1MB7 LINE L1 5336 5991 -193 3 1237 3491 72 0 2 chrX 85532882 85533355 -81116941 - L1Md_F2 LINE L1 -293 6289 5818 3 1237 1947 98 58 0 chrX 85533355 85533632 -81116664 + L1_Mus1 LINE L1 6275 6567 0 3 1237 534 243 71 89 chrX 85533779 85534172 -81116124 + L1M2 LINE L1 2782 3167 -2976 3 1237 336 284 18 27 chrX 85534174 85534286 -81116010 + L1M2 LINE L1 4338 4448 -1695 3 1237 389 243 30 88 chrX 85534315 85534465 -81115831 + B1F SINE Alu 8 147 -2 3 1237 293 295 66 0 chrX 85534473 85534639 -81115657 + L1M2 LINE L1 4460 4636 -1507 3 1237 240 200 30 15 chrX 85534934 85535000 -81115296 + (CAGA)n Simple_repeat Simple_repeat 4 70 0 4 1237 209 176 0 0 chrX 85535035 85535069 -81115227 + G-rich Low_complexity Low_complexity 1 34 0 4 1237 546 119 0 0 chrX 85535080 85535164 -81115132 + (GA)n Simple_repeat Simple_repeat 1 84 0 4 1237 695 259 67 22 chrX 85535268 85535831 -81114465 + L1M2 LINE L1 4844 5454 -858 3 1237 1089 327 49 18 chrX 85535852 85536304 -81113992 + Lx8 LINE L1 6855 7320 -153 4 1237 186 43 0 0 chrX 85536307 85536330 -81113966 + (TTTTG)n Simple_repeat Simple_repeat 5 27 0 4 1237 786 263 32 0 chrX 85536519 85536800 -81113496 + L1M2 LINE L1 5527 5816 -484 3 1237 411 20 0 0 chrX 85537404 85537449 -81112847 + (TC)n Simple_repeat Simple_repeat 1 45 0 4 1237 753 43 0 0 chrX 85537449 85537542 -81112754 + (TTC)n Simple_repeat Simple_repeat 3 95 0 4 1237 4278 195 54 33 chrX 85537554 85538562 -81111734 - Lx2B LINE L1 0 7000 5972 4 1237 3618 148 49 5 chrX 85538560 85539285 -81111011 + Lx3C LINE L1 5201 5940 -1036 4 1237 4992 66 11 0 chrX 85539306 85539955 -81110341 - L1Md_F2 LINE L1 0 6582 5927 4 1237 220 330 45 27 chrX 85539961 85540073 -81110223 - B4 SINE B4 -170 122 9 5 1237 213 297 75 21 chrX 85540096 85540189 -81110107 + MIRb SINE MIR 113 210 -58 5 1237 583 335 128 12 chrX 85540191 85540524 -81109772 + MLT1A1 LTR MaLR 1 372 -36 5 1237 217 329 35 81 chrX 85540524 85540577 -81109719 + ID4_ SINE ID 1 53 -30 5 1237 2427 191 114 77 chrX 85540577 85541242 -81109054 + RMER6C LTR ERVK 1 690 0 5 1237 217 329 35 81 chrX 85541242 85541274 -81109022 + ID4_ SINE ID 54 82 -1 5 1237 610 322 0 6 chrX 85541785 85541963 -81108333 + MER5B DNA MER1_type 2 178 0 5 1237 320 336 15 23 chrX 85541984 85542115 -81108181 + MER5A1 DNA MER1_type 12 141 -25 5 1237 377 351 95 21 chrX 85542656 85542845 -81107451 + MLT1A1 LTR MaLR 331 533 -36 5 1237 297 301 48 0 chrX 85542883 85542986 -81107310 + MLT1A1-int LTR MaLR 5 112 -1297 5 1237 286 286 8 48 chrX 85544208 85544333 -81105963 - RodERV21-int LTR ERV1 -145 4846 4727 5 1237 363 319 29 76 chrX 85544339 85544655 -81105641 - RodERV21-int LTR ERV1 -1973 3018 2718 5 1237 27 0 0 0 chrX 85544772 85544799 -81105497 + AT_rich Low_complexity Low_complexity 1 27 0 5 1237 1413 153 16 16 chrX 85544804 85545056 -81105240 - Lx4A LINE L1 0 7058 6807 5 1237 4287 176 47 70 chrX 85545083 85546005 -81104291 - RMER19B LTR ERVK 0 902 3 6 1237 4700 74 13 0 chrX 85546760 85547371 -81102925 - L1_Mus1 LINE L1 -1 6566 5948 6 1237 883 307 17 45 chrX 85549029 85549387 -81100909 - RodERV21-int LTR ERV1 -2273 2718 2371 5 1237 330 26 0 0 chrX 85549407 85549446 -81100850 + (GGAGAA)n Simple_repeat Simple_repeat 4 42 0 6 1237 1453 17 6 11 chrX 85549450 85549631 -81100665 + (GAA)n Simple_repeat Simple_repeat 1 180 0 6 1237 495 0 0 0 chrX 85549631 85549686 -81100610 + (GAAA)n Simple_repeat Simple_repeat 4 58 0 6 1237 332 237 13 0 chrX 85549686 85549762 -81100534 - RodERV21-int LTR ERV1 -2609 2382 2306 5 1237 567 241 183 50 chrX 85549762 85550002 -81100294 - RLTR10A LTR ERVK 0 411 140 6 1237 3699 296 44 53 chrX 85550056 85551394 -81098902 - RodERV21-int LTR ERV1 -2683 2308 985 5 1237 342 0 0 0 chrX 85551394 85551432 -81098864 + (CAA)n Simple_repeat Simple_repeat 2 39 0 6 1237 3699 296 44 53 chrX 85551432 85551718 -81098578 - RodERV21-int LTR ERV1 -4007 984 698 5 1237 720 106 35 0 chrX 85552339 85552452 -81097844 - B2_Mm2 SINE B2 -11 184 68 6 1237 510 339 40 16 chrX 85553072 85553546 -81096750 - RLTR6-int LTR ERV1 -128 7650 7355 6 1237 1135 142 8 97 chrX 85554843 85555101 -81095195 - L1_Mm LINE L1 -1048 4835 4601 6 1237 12747 172 26 107 chrX 85555101 85559775 -81090521 - L1Md_F2 LINE L1 -1 6581 2219 7 1237 288 0 0 0 chrX 85559775 85559807 -81090489 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 1237 687 126 6 89 chrX 85559808 85559965 -81090331 - RMER17B LTR ERVK -501 457 314 7 1237 12747 206 32 134 chrX 85559965 85560615 -81089681 - L1Md_F2 LINE L1 -3668 2217 1603 7 1237 952 158 0 0 chrX 85560615 85560761 -81089535 - B1_Mus1 SINE Alu -1 147 2 7 1237 12747 206 32 134 chrX 85560761 85560885 -81089411 - L1Md_F2 LINE L1 -4284 1602 1501 7 1237 1133 147 11 0 chrX 85560885 85561075 -81089221 - B2_Mm1t SINE B2 0 193 2 7 1237 12747 178 119 53 chrX 85561075 85562298 -81087998 - L1Md_F2 LINE L1 -4386 1500 6 7 1237 413 131 0 0 chrX 85562324 85562385 -81087911 - B2_Mm2 SINE B2 -125 70 10 7 1237 304 355 4 0 chrX 85562588 85562690 -81087606 - PB1D10 SINE Alu -8 109 8 7 1237 1034 317 78 27 chrX 85562750 85563159 -81087137 + MLT1F-int LTR MaLR 903 1332 -157 7 1237 25 90 0 0 chrX 85563174 85563241 -81087055 + AT_rich Low_complexity Low_complexity 1 67 0 7 1237 628 352 52 22 chrX 85563384 85563651 -81086645 + B4A SINE B4 16 290 -2 7 1237 185 159 0 22 chrX 85563671 85563716 -81086580 + (TA)n Simple_repeat Simple_repeat 1 44 0 8 1237 576 0 0 0 chrX 85564229 85564293 -81086003 + (TC)n Simple_repeat Simple_repeat 1 64 0 8 1237 314 279 16 8 chrX 85564708 85564831 -81085465 + L3b LINE CR1 193 316 -166 8 1237 261 0 0 0 chrX 85566735 85566764 -81083532 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 8 1237 1012 246 26 37 chrX 85566850 85567230 -81083066 + L1_Mur3 LINE L1 889 1264 -6464 8 1237 2747 70 2 164 chrX 85567243 85567483 -81082813 + RLTR13D5 LTR ERVK 1 172 -851 8 1237 1132 68 7 0 chrX 85567483 85567629 -81082667 - B1_Mm SINE Alu 0 147 1 8 1237 2747 70 2 164 chrX 85567629 85567887 -81082409 + RLTR13D5 LTR ERVK 173 418 -605 8 1237 934 216 40 12 chrX 85567888 85568136 -81082160 + L1_Mur3 LINE L1 1520 1774 -4106 8 1237 355 221 13 25 chrX 85568144 85568158 -81082138 - MTA_Mm LTR MaLR -343 78 66 8 1237 691 99 0 40 chrX 85568158 85568284 -81082012 - Lx LINE L1 -2 6652 6532 8 1237 532 31 0 0 chrX 85568284 85568348 -81081948 - MTA_Mm LTR MaLR -332 64 1 8 1237 884 316 19 12 chrX 85568348 85568604 -81081692 - RMER1C Other Other -345 997 740 8 1237 941 287 81 8 chrX 85568620 85568978 -81081318 - MER82 DNA MER2_type -262 391 8 9 1237 335 293 83 12 chrX 85569057 85569226 -81081070 + L1M2 LINE L1 5089 5269 -874 9 1237 216 0 0 0 chrX 85569299 85569323 -81080973 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 1237 248 351 0 0 chrX 85569527 85569604 -81080692 - Lx8 LINE L1 -861 6612 6536 9 1237 445 312 26 66 chrX 85569773 85569924 -81080372 - RSINE1 SINE B4 -4 161 17 9 1237 212 122 24 0 chrX 85570741 85570782 -81079514 + (TTTTC)n Simple_repeat Simple_repeat 2 43 0 9 1237 7292 80 1 6 chrX 85570829 85572380 -81077916 - L1Md_F2 LINE L1 -1 6581 5040 9 1237 2744 256 38 74 chrX 85573093 85574721 -81075575 - Lx6 LINE L1 -232 7228 5279 9 1237 3525 103 8 2 chrX 85574721 85575227 -81075069 - L1_Mus3 LINE L1 -2 6636 6128 9 1237 1526 88 40 4 chrX 85575231 85575531 -81074765 + L1_Mus3 LINE L1 6393 6638 0 9 1237 2744 251 22 158 chrX 85575531 85576238 -81074058 - Lx6 LINE L1 -599 5278 4727 9 1237 8296 112 151 9 chrX 85576260 85578706 -81071590 - L1Md_F2 LINE L1 0 6582 3488 1 1237 1028 107 0 0 chrX 85578707 85578847 -81071449 + B1_Mm SINE Alu 1 140 -7 1 1237 396 0 0 0 chrX 85578851 85578895 -81071401 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 1 1237 489 76 0 0 chrX 85578938 85579004 -81071292 + (TTCC)n Simple_repeat Simple_repeat 4 69 0 1 1237 1134 82 0 0 chrX 85579007 85579153 -81071143 - B1_Mus1 SINE Alu -2 146 1 1 1237 24 0 0 0 chrX 85579848 85579872 -81070424 + AT_rich Low_complexity Low_complexity 1 24 0 1 1237 28 48 0 0 chrX 85580165 85580207 -81070089 + AT_rich Low_complexity Low_complexity 1 42 0 1 1237 22 56 0 0 chrX 85580654 85580690 -81069606 + AT_rich Low_complexity Low_complexity 1 36 0 1 1237 22 35 0 0 chrX 85581411 85581440 -81068856 + AT_rich Low_complexity Low_complexity 1 29 0 1 1237 256 330 41 10 chrX 85581555 85581653 -81068643 + PB1D10 SINE Alu 9 109 -8 1 1237 3459 188 15 16 chrX 85581675 85582347 -81067949 - Lx9 LINE L1 -154 7490 6820 1 1237 980 272 62 32 chrX 85582341 85582649 -81067647 + Lx9 LINE L1 6477 6793 -851 1 1237 379 202 34 119 chrX 85583474 85583592 -81066704 - RSINE1 SINE B4 -22 143 36 1 1237 22 0 0 0 chrX 85583954 85583976 -81066320 + AT_rich Low_complexity Low_complexity 1 22 0 1 1237 198 0 0 0 chrX 85584353 85584375 -81065921 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1237 208 321 132 42 chrX 85584937 85585103 -81065193 + L2 LINE L2 2248 2428 -991 1 1237 617 310 121 17 chrX 85585313 85585525 -81064771 + L1MA4 LINE L1 4416 4643 -1500 1 1237 342 0 0 0 chrX 85585525 85585563 -81064733 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1 1237 617 303 85 84 chrX 85585563 85586480 -81063816 + L1MA4 LINE L1 4606 5581 -719 1 1237 266 309 52 31 chrX 85586469 85586663 -81063633 + L1MA4 LINE L1 5732 5929 -371 1 1237 689 140 7 0 chrX 85586724 85586860 -81063436 + (TCTA)n Simple_repeat Simple_repeat 2 138 0 1 1237 247 192 0 19 chrX 85587259 85587312 -81062984 + CT-rich Low_complexity Low_complexity 2 53 0 1 1237 1474 294 7 19 chrX 85587312 85587722 -81062574 + MTD LTR MaLR 6 410 -9 1 1237 551 173 30 49 chrX 85588528 85588692 -81061604 - Lx9 LINE L1 -7 7637 7477 1 1237 198 103 0 0 chrX 85588692 85588721 -81061575 + (TATATG)n Simple_repeat Simple_repeat 1 29 0 1 1237 568 98 76 0 chrX 85588721 85588813 -81061483 + RLTR13C2 LTR ERVK 706 804 -4 1 1237 531 181 11 0 chrX 85588813 85588907 -81061389 + RLTR13D1 LTR ERVK 712 806 0 1 1237 1332 308 92 3 chrX 85588936 85589360 -81060936 + RMER1A Other Other 66 473 -557 1 1237 2022 209 41 4 chrX 85589419 85589909 -81060387 + L1_Mur3 LINE L1 1561 2068 -3812 1 154 525 113 16 31 chrX 85589913 85590041 -81060255 + (CAGAGA)n Simple_repeat Simple_repeat 6 131 0 1 1238 1235 248 41 50 chrX 85590041 85590380 -81059916 + Lx6 LINE L1 7122 7457 -3 1 1238 1036 153 26 0 chrX 85590410 85590600 -81059696 + Lx2 LINE L1 6803 6997 0 1 1238 470 217 146 8 chrX 85590648 85590778 -81059518 - Lx5 LINE L1 -1 7049 6902 1 1238 1850 259 126 6 chrX 85590818 85591319 -81058977 + Lx5 LINE L1 6277 6837 -213 1 1238 211 286 18 0 chrX 85591399 85591455 -81058841 + L2a LINE L2 3363 3419 -7 1 1238 531 301 7 20 chrX 85591793 85591942 -81058354 + Lx8 LINE L1 6578 6724 -749 1 1238 312 247 12 0 chrX 85592042 85592123 -81058173 + Lx8 LINE L1 6726 6807 -666 1 1238 35971 19 15 20 chrX 85592124 85596807 -81053489 + L1Md_A LINE L1 215 4927 -956 1 1238 225 200 46 77 chrX 85596807 85596872 -81053424 - RMER20A LTR ERVK -268 248 186 1 1238 35971 19 15 20 chrX 85596872 85597525 -81052771 + L1Md_A LINE L1 4928 5586 -297 1 1238 8695 19 0 0 chrX 85597525 85598521 -81051775 + L1Md_A LINE L1 5587 6582 0 1 1238 1169 296 68 39 chrX 85598525 85599011 -81051285 + Lx8 LINE L1 6793 7292 -181 1 1238 3002 23 0 3 chrX 85599012 85599359 -81050937 - ORR1A0 LTR MaLR 0 346 1 1 1238 228 67 0 0 chrX 85599521 85599551 -81050745 + (CATATA)n Simple_repeat Simple_repeat 4 33 0 1 1238 546 99 0 0 chrX 85599707 85599798 -81050498 + (TC)n Simple_repeat Simple_repeat 2 92 0 1 1238 387 0 0 0 chrX 85599798 85599841 -81050455 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1238 951 314 44 15 chrX 85599850 85600237 -81050059 - Lx7 LINE L1 -383 7313 6910 1 1238 265 319 0 87 chrX 85600551 85600654 -81049642 - MIR SINE MIR -67 141 48 1 1238 739 294 100 17 chrX 85600984 85601285 -81049011 + Tigger1 DNA MER2_type 1260 1585 -833 1 1238 24 0 0 0 chrX 85601570 85601594 -81048702 + AT_rich Low_complexity Low_complexity 1 24 0 1 1238 23 0 0 0 chrX 85601853 85601876 -81048420 + AT_rich Low_complexity Low_complexity 1 23 0 1 1238 323 284 28 0 chrX 85601926 85602093 -81048203 + CT-rich Low_complexity Low_complexity 1 171 0 1 1238 2900 55 3 3 chrX 85602390 85602756 -81047540 + L1Md_F2 LINE L1 5220 5585 -298 1 1238 8056 44 3 2 chrX 85602757 85603740 -81046556 + L1Md_F2 LINE L1 5587 6570 -12 1 1238 1204 146 188 4 chrX 85603776 85604031 -81046265 - MusHAL1 LINE L1 -1015 1697 1396 1 1238 5946 139 23 3 chrX 85604005 85605695 -81044601 - L1Md_F LINE L1 -4182 1701 98 1 1238 863 243 37 9 chrX 85605724 85605940 -81044356 - RMER19B LTR ERVK 0 902 681 1 1238 1325 221 110 0 chrX 85605963 85606077 -81044219 + L1_Mur3 LINE L1 4787 4936 -944 1 1238 414 69 0 0 chrX 85606077 85606135 -81044161 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 1238 1361 144 0 0 chrX 85606135 85606357 -81043939 + L1_Mur1 LINE L1 4946 5167 -719 1 1238 963 274 51 119 chrX 85606357 85606999 -81043297 - L1_Mur3 LINE L1 -1912 3968 3385 1 1238 396 0 0 0 chrX 85606999 85607043 -81043253 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1238 963 274 51 119 chrX 85607043 85607122 -81043174 - L1_Mur3 LINE L1 -2496 3384 3298 1 1238 2460 289 70 24 chrX 85607092 85607897 -81042399 - RMER1C Other Other -6 1336 495 1 1238 2677 245 40 31 chrX 85607892 85608824 -81041472 - L1_Mur3 LINE L1 -2565 3315 2376 1 1238 6980 132 5 6 chrX 85608812 85610044 -81040252 - Lx LINE L1 -9 6645 5415 1 1238 690 263 11 70 chrX 85610042 85610312 -81039984 - L1_Mur3 LINE L1 -3496 2384 2131 1 1238 690 180 8 24 chrX 85610327 85610452 -81039844 - Lx3B LINE L1 -345 6628 6506 1 1238 772 128 0 0 chrX 85610454 85610579 -81039717 - Lx3B LINE L1 -1099 5874 5750 1 1238 1565 155 0 45 chrX 85610579 85610869 -81039427 + Lx3B LINE L1 6693 6969 -4 1 1238 1113 102 0 0 chrX 85611054 85611201 -81039095 - B1_Mus1 SINE Alu -1 147 1 1 1238 576 246 59 78 chrX 85611318 85611347 -81038949 + CYRA11_Mm Unknown Y-chromosome 142 305 -312 1 1238 1255 156 14 9 chrX 85611347 85611561 -81038735 - URR1B DNA MER1_type -1 224 10 1 1238 576 246 59 78 chrX 85611561 85611574 -81038722 + CYRA11_Mm Unknown Y-chromosome 306 392 -225 1 1238 783 249 95 12 chrX 85611576 85611901 -81038395 - L1_Mur3 LINE L1 -4057 1823 1472 1 1238 1418 98 74 0 chrX 85611913 85612128 -81038168 - MTB LTR MaLR -169 231 1 1 1238 339 25 0 0 chrX 85612132 85612172 -81038124 + (TATG)n Simple_repeat Simple_repeat 2 41 0 1 1238 528 286 56 0 chrX 85612198 85612324 -81037972 - RSINE1 SINE B4 -30 135 3 1 1238 1027 129 16 5 chrX 85612520 85612707 -81037589 - L1_Mus3 LINE L1 -5 6633 6445 1 1238 778 239 11 16 chrX 85613963 85614154 -81036142 + Lx4B LINE L1 6869 7058 0 1 1238 423 329 49 0 chrX 85614429 85614572 -81035724 + B3A SINE B2 46 195 -3 1 1238 186 103 0 0 chrX 85614685 85614714 -81035582 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 1238 755 326 42 76 chrX 85614749 85614944 -81035352 - B4 SINE B4 -12 280 85 1 1238 597 288 14 7 chrX 85614944 85615091 -81035205 - B1_Mur2 SINE Alu -1 148 1 1 1238 755 326 42 76 chrX 85615091 85615184 -81035112 - B4 SINE B4 -208 84 2 1 1238 2157 203 76 48 chrX 85615327 85615866 -81034430 + RMER2 LTR ERV1 1 554 -13 1 1238 233 162 0 0 chrX 85616035 85616072 -81034224 + RMER2 LTR ERV1 29 65 -502 1 1238 459 0 0 0 chrX 85616551 85616602 -81033694 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1238 261 119 0 0 chrX 85616602 85616643 -81033653 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1238 408 328 5 30 chrX 85617399 85617563 -81032733 + MMERGLN-int LTR ERV1 1300 1605 -5951 1 1238 681 123 0 0 chrX 85617821 85617927 -81032369 + (GGA)n Simple_repeat Simple_repeat 3 108 0 1 1238 323 326 29 36 chrX 85617927 85618067 -81032229 + MMERGLN-int LTR ERV1 2192 2330 -5448 1 1238 400 284 29 22 chrX 85618241 85618378 -81031918 + MMERGLN-int LTR ERV1 3515 3652 -3800 1 1238 322 282 108 9 chrX 85618640 85618751 -81031545 + MMERGLN-int LTR ERV1 4132 4253 -3353 1 1238 862 316 6 12 chrX 85619232 85619565 -81030731 + MMERGLN-int LTR ERV1 4763 5093 -2463 1 1238 7233 105 3 13 chrX 85619593 85620713 -81029583 + MusHAL1 LINE L1 1115 2222 -490 1 1238 9995 197 29 3 chrX 85620708 85621198 -81029098 + L1Md_A LINE L1 760 1249 -5475 1 1238 198 0 0 0 chrX 85621198 85621220 -81029076 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1238 9995 112 18 1 chrX 85621220 85622747 -81027549 + L1Md_A LINE L1 1250 2802 -3081 1 1238 573 71 0 0 chrX 85622749 85622834 -81027462 + L1_Mus1 LINE L1 6481 6565 -2 1 1238 405 0 0 0 chrX 85622838 85622883 -81027413 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1238 301 300 85 33 chrX 85622937 85623244 -81027052 - L1MB2 LINE L1 -75 6096 5774 1 1238 33379 80 20 5 chrX 85623213 85629297 -81020999 - L1Md_F2 LINE L1 -7 6575 399 1 1238 572 318 79 4 chrX 85630011 85630276 -81020020 + MER34A1 LTR ERV1 283 567 -20 1 1238 22 56 0 0 chrX 85630525 85630561 -81019735 + AT_rich Low_complexity Low_complexity 1 36 0 1 1238 506 243 32 3 chrX 85630659 85630807 -81019489 + MT2B LTR ERVL 1 157 -376 1 1238 2168 85 19 1 chrX 85630813 85631120 -81019176 + L1Md_F2 LINE L1 5938 6213 -369 1 1238 2826 52 6 0 chrX 85631258 85631623 -81018673 + L1Md_F2 LINE L1 6216 6582 0 1 1238 949 252 107 19 chrX 85631623 85631996 -81018300 + MT2B LTR ERVL 56 599 -2 1 1238 711 112 0 0 chrX 85632319 85632426 -81017870 + (TA)n Simple_repeat Simple_repeat 1 107 0 1 1238 339 83 0 40 chrX 85633093 85633133 -81017163 + L1Md_F3 LINE L1 6345 6384 -198 1 1238 437 117 0 0 chrX 85633133 85633210 -81017086 + L1_Mus3 LINE L1 6558 6634 -4 1 1238 752 150 0 21 chrX 85633422 85633565 -81016731 - L1_Mus4 LINE L1 -71 6565 6426 1 1238 21 36 0 0 chrX 85633715 85633743 -81016553 + AT_rich Low_complexity Low_complexity 1 28 0 1 1238 444 20 0 0 chrX 85633842 85633892 -81016404 + L1Md_F3 LINE L1 6391 6440 -144 1 1238 3326 11 0 0 chrX 85634912 85635290 -81015006 + L1Md_A LINE L1 6205 6582 0 1 1238 251 186 152 0 chrX 85635895 85635954 -81014342 + B1F1 SINE Alu 82 149 0 1 1238 292 75 0 0 chrX 85636342 85636382 -81013914 - L1_Mur2 LINE L1 -2496 3381 3342 1 1238 1158 122 0 0 chrX 85636410 85636590 -81013706 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1238 198 103 0 0 chrX 85636590 85636619 -81013677 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 1238 9149 111 24 14 chrX 85637070 85638476 -81011820 - Lx3_Mus LINE L1 0 7009 5589 1 1238 360 43 0 0 chrX 85639630 85639676 -81010620 + (TC)n Simple_repeat Simple_repeat 2 47 0 2 1238 258 32 0 0 chrX 85639676 85639706 -81010590 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1238 208 0 62 0 chrX 85639838 85639870 -81010426 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1238 309 42 0 20 chrX 85639870 85639919 -81010377 - B1_Mur4 SINE Alu -2 148 101 2 1238 271 319 64 58 chrX 85640057 85640230 -81010066 + MER31-int LTR ERV1 3836 4009 -927 2 1238 1464 240 22 0 chrX 85640572 85640893 -81009403 - Lx4A LINE L1 -1 7057 6730 2 1238 244 343 48 43 chrX 85641528 85641716 -81008580 + MER92C LTR ERV1 1 200 -436 2 1238 226 358 12 0 chrX 85641948 85642029 -81008267 + ID4 SINE ID 1 82 -1 2 1238 516 322 66 47 chrX 85642445 85642657 -81007639 + B3A SINE B2 1 216 0 2 1238 1418 282 85 44 chrX 85642658 85643245 -81007051 + RMER19C LTR ERVK 1 611 0 2 1238 780 283 77 31 chrX 85643463 85643853 -81006443 - LTR37A LTR ERV1 0 426 19 2 1238 34 0 0 0 chrX 85643908 85643942 -81006354 + AT_rich Low_complexity Low_complexity 1 34 0 2 1238 342 283 96 5 chrX 85644058 85644246 -81006050 - L1MB2 LINE L1 -32 6139 5935 2 1238 753 308 59 32 chrX 85644269 85644742 -81005554 - L1MB2 LINE L1 -339 5832 5347 2 1238 323 248 24 24 chrX 85644772 85644896 -81005400 - L1MB2 LINE L1 -855 5285 5162 2 1238 357 333 38 15 chrX 85645121 85645252 -81005044 - B1F1 SINE Alu 0 149 16 2 1238 885 190 227 80 chrX 85646962 85647152 -81003144 + ORR1D1 LTR MaLR 1 234 -140 2 1238 522 0 0 0 chrX 85647152 85647210 -81003086 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 1238 885 190 227 80 chrX 85647210 85647345 -81002951 + ORR1D1 LTR MaLR 235 374 0 2 1238 761 292 45 92 chrX 85647666 85648079 -81002217 - MTE2a LTR MaLR -5 374 6 2 1238 565 350 24 30 chrX 85648094 85648389 -81001907 + MLT1C LTR MaLR 175 467 0 2 1238 31070 96 8 13 chrX 85648530 85653713 -80996583 + L1Md_A LINE L1 446 5586 -297 2 1238 7226 73 23 0 chrX 85653713 85654685 -80995611 + L1Md_F2 LINE L1 5587 6580 -2 2 1238 1805 339 26 69 chrX 85655125 85656155 -80994141 + Lx7 LINE L1 6147 7132 -564 2 1238 468 0 0 0 chrX 85656222 85656274 -80994022 + (TC)n Simple_repeat Simple_repeat 1 52 0 2 1238 251 220 0 0 chrX 85656275 85656325 -80993971 - Lx6 LINE L1 -14 7446 7397 2 1238 1676 160 23 32 chrX 85656325 85656635 -80993661 + RLTR27 LTR ERVK 1 307 -2 2 1238 328 119 85 0 chrX 85656659 85656718 -80993578 + RLTR10-int LTR ERVK 204 267 -7314 2 1238 668 243 45 45 chrX 85656750 85656948 -80993348 + RLTR10-int LTR ERVK 655 852 -1135 2 1238 402 115 0 0 chrX 85657025 85657086 -80993210 + (TTTC)n Simple_repeat Simple_repeat 4 64 0 2 1238 699 184 25 57 chrX 85657086 85657356 -80992940 + RLTR10-int LTR ERVK 57 503 -6039 2 1238 2278 72 129 0 chrX 85657356 85657689 -80992607 + RLTR10-int LTR ERVK 5007 5382 -1160 2 1238 4696 103 25 9 chrX 85657677 85658406 -80991890 + RLTR10-int LTR ERVK 1288 1986 -1 2 1238 2255 82 9 0 chrX 85658406 85658721 -80991575 + RLTR10A LTR ERVK 1 318 -93 2 1238 407 202 0 0 chrX 85658722 85658806 -80991490 + MMERVK10C-int LTR ERVK 7498 7581 0 2 1238 1831 158 16 3 chrX 85658806 85659111 -80991185 + RLTR27 LTR ERVK 1 309 0 2 1238 4495 242 39 48 chrX 85659114 85659480 -80990816 - Lx6 LINE L1 -78 7382 7013 2 1238 395 0 0 39 chrX 85659480 85659532 -80990764 + (TTTTA)n Simple_repeat Simple_repeat 2 51 0 2 1238 4495 242 39 48 chrX 85659532 85659671 -80990625 - Lx6 LINE L1 -448 7012 6893 2 1238 378 0 0 0 chrX 85659671 85659713 -80990583 + (TATG)n Simple_repeat Simple_repeat 3 44 0 2 1238 4495 228 84 28 chrX 85659713 85661105 -80989191 - Lx6 LINE L1 -568 6892 5388 2 1238 725 180 80 12 chrX 85661109 85661272 -80989024 + L1_Mur3 LINE L1 4423 4596 -1284 2 1238 272 325 94 35 chrX 85661274 85661475 -80988821 + Lx8 LINE L1 7227 7439 -34 2 1238 31 0 0 0 chrX 85661620 85661651 -80988645 + AT_rich Low_complexity Low_complexity 1 31 0 2 1238 900 327 129 14 chrX 85662728 85663153 -80987143 + MLT1D LTR MaLR 31 504 -1 2 1238 24 0 0 0 chrX 85663267 85663291 -80987005 + AT_rich Low_complexity Low_complexity 1 24 0 2 1238 742 298 5 67 chrX 85663346 85663569 -80986727 - B4A SINE B4 0 292 84 2 1238 219 45 21 43 chrX 85663576 85663623 -80986673 + (TTTTG)n Simple_repeat Simple_repeat 3 48 0 2 1238 334 339 6 6 chrX 85663716 85663891 -80986405 - L1MA5 LINE L1 -23 6277 6103 2 1238 252 0 0 0 chrX 85664268 85664296 -80986000 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 2 1238 660 215 33 0 chrX 85664298 85664457 -80985839 - B2_Mm2 SINE B2 -38 178 1 2 1238 259 95 63 0 chrX 85666941 85667004 -80983292 + T-rich Low_complexity Low_complexity 4 70 0 2 1238 1073 82 0 46 chrX 85667004 85667157 -80983139 - B1_Mm SINE Alu 0 147 2 2 1238 28 61 0 0 chrX 85667656 85667705 -80982591 + AT_rich Low_complexity Low_complexity 1 49 0 2 1238 7047 95 5 1 chrX 85668385 85669368 -80980928 - L1_Mus1 LINE L1 -21 6546 5587 2 1238 13122 169 28 49 chrX 85669371 85673425 -80976871 - L1Md_F LINE L1 -2523 3360 98 2 1238 452 314 116 0 chrX 85673579 85673700 -80976596 + B1_Mur1 SINE Alu 2 136 -13 2 1238 606 63 0 0 chrX 85673703 85673782 -80976514 + (GA)n Simple_repeat Simple_repeat 2 80 0 2 1238 423 0 0 0 chrX 85673782 85673829 -80976467 + (GAA)n Simple_repeat Simple_repeat 3 49 0 2 1238 254 194 0 16 chrX 85673831 85673894 -80976402 + GA-rich Low_complexity Low_complexity 4 65 0 2 1238 31127 88 2 12 chrX 85674471 85679478 -80970818 + L1Md_F3 LINE L1 632 5585 -298 2 1238 7280 73 19 4 chrX 85679479 85680462 -80969834 + L1Md_F3 LINE L1 5587 6584 0 2 1238 24 0 0 0 chrX 85680814 85680838 -80969458 + AT_rich Low_complexity Low_complexity 1 24 0 2 1238 33076 97 8 8 chrX 85680854 85686994 -80963302 - L1Md_F2 LINE L1 -13 6569 217 2 1238 21 71 0 0 chrX 85687149 85687191 -80963105 + AT_rich Low_complexity Low_complexity 1 42 0 2 1238 727 286 108 84 chrX 85688997 85689451 -80960845 + RMER13A LTR ERVK 2 466 -394 2 1238 1149 291 64 28 chrX 85690466 85690826 -80959470 + MTEb LTR MaLR 7 379 0 2 1238 1925 308 78 26 chrX 85690840 85691560 -80958736 + MTEb-int LTR MaLR 10 766 -814 2 1238 1355 290 90 5 chrX 85691577 85691945 -80958351 + MTD LTR MaLR 13 411 -8 2 1238 1810 333 79 16 chrX 85691946 85692556 -80957740 + MTEb-int LTR MaLR 777 1424 -156 2 1238 2021 112 49 15 chrX 85692911 85693024 -80957272 - Lx LINE L1 -6 6648 6536 2 1238 183 42 0 0 chrX 85693024 85693048 -80957248 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 2 1238 2021 112 49 15 chrX 85693048 85693262 -80957034 - Lx LINE L1 -119 6535 6311 2 1238 250 0 100 0 chrX 85694985 85695025 -80955271 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2 1238 222 312 0 0 chrX 85695057 85695105 -80955191 - ID4_ SINE ID -18 65 18 2 1238 6612 62 13 16 chrX 85695670 85696559 -80953737 + L1_Mus1 LINE L1 5571 6424 -143 2 1238 6241 246 34 23 chrX 85696561 85698762 -80951534 + ETnERV2-int LTR ERVK 2077 5085 -2321 2 1238 847 45 49 77 chrX 85698762 85698905 -80951391 + L1_Mus1 LINE L1 6428 6566 -1 2 1238 298 16 15 90 chrX 85699908 85699975 -80950321 + (CAAAAA)n Simple_repeat Simple_repeat 1 62 0 2 1238 323 324 18 36 chrX 85700025 85700137 -80950159 + PB1D10 SINE Alu 3 112 -5 2 1238 378 178 0 45 chrX 85700141 85700253 -80950043 + A-rich Low_complexity Low_complexity 4 110 0 2 1238 371 31 62 0 chrX 85700453 85700518 -80949778 + (TTG)n Simple_repeat Simple_repeat 2 70 0 2 1238 321 253 0 0 chrX 85701840 85701927 -80948369 + (TA)n Simple_repeat Simple_repeat 2 88 0 2 1238 205 98 24 24 chrX 85701952 85701994 -80948302 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1238 243 0 0 0 chrX 85702020 85702047 -80948249 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1238 449 273 181 5 chrX 85702085 85702295 -80948001 + Charlie5 DNA MER1_type 2378 2624 0 2 1238 5603 117 21 11 chrX 85705948 85706835 -80943461 + L1_Mm LINE L1 4795 5690 -193 2 1238 591 115 0 0 chrX 85706861 85706948 -80943348 + RLTR22_Mus LTR ERVK 1543 1629 -179 2 1238 4152 91 11 23 chrX 85706948 85707219 -80943077 + L1_Mus3 LINE L1 6027 6290 -348 2 1238 2844 38 6 3 chrX 85707219 85707564 -80942732 - ORR1A0 LTR MaLR 0 346 1 2 1238 4152 91 11 23 chrX 85707564 85707908 -80942388 + L1_Mus3 LINE L1 6291 6635 -3 2 1238 3430 202 84 16 chrX 85708081 85708770 -80941526 + RLTR25B LTR ERVK 1 723 -305 2 1238 396 0 0 0 chrX 85708770 85708814 -80941482 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 2 1238 3430 202 84 16 chrX 85708814 85708924 -80941372 + RLTR25B LTR ERVK 724 854 -174 2 1238 287 297 47 33 chrX 85709007 85709157 -80941139 + RLTR25B LTR ERVK 740 891 -137 2 1238 206 98 0 47 chrX 85709164 85709207 -80941089 + (CAGAGA)n Simple_repeat Simple_repeat 5 45 0 2 1238 332 147 0 128 chrX 85709242 85709320 -80940976 - RLTR19A LTR ERVK -428 68 1 2 1238 468 0 0 0 chrX 85709423 85709475 -80940821 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 2 1238 22 35 0 0 chrX 85709589 85709618 -80940678 + AT_rich Low_complexity Low_complexity 1 29 0 2 1238 743 316 87 50 chrX 85709720 85710354 -80939942 + L1M3c LINE L1 911 1783 -4530 2 1238 24 0 0 0 chrX 85710518 85710542 -80939754 + AT_rich Low_complexity Low_complexity 1 24 0 2 1238 263 351 54 0 chrX 85711018 85711129 -80939167 + L1M2c LINE L1 332 448 -6401 2 1238 769 61 0 0 chrX 85711402 85711501 -80938795 - B1_Mus2 SINE Alu 0 147 49 2 1238 277 252 90 52 chrX 85711451 85711585 -80938711 - RLTR25B LTR ERVK -530 498 360 2 1238 530 290 32 16 chrX 85712630 85712879 -80937417 + L1M2c LINE L1 1685 1937 -4912 2 1238 294 374 95 0 chrX 85712920 85713067 -80937229 + Charlie12 DNA MER1_type 15 175 -2698 2 1238 273 352 19 0 chrX 85712984 85713092 -80937204 - RMER30 DNA MER1_type -83 119 10 2 1238 629 272 81 6 chrX 85713093 85713267 -80937029 + B3 SINE B2 2 188 -28 2 1238 234 296 0 0 chrX 85713446 85713554 -80936742 + L1M2c LINE L1 1974 2081 -4768 2 1238 219 220 0 0 chrX 85713566 85713616 -80936680 + (ATG)n Simple_repeat Simple_repeat 2 51 0 2 1238 301 325 60 26 chrX 85713729 85713846 -80936450 + ID_B1 SINE B4 100 220 -4 2 1238 487 201 111 83 chrX 85713955 85714172 -80936124 + L1M2c LINE L1 2360 2582 -4267 2 1238 359 328 34 25 chrX 85714203 85714322 -80935974 + RSINE1 SINE B4 2 121 -44 2 1238 261 57 0 0 chrX 85714383 85714418 -80935878 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1238 559 306 83 0 chrX 85714653 85714846 -80935450 + B3 SINE B2 2 210 -6 2 1238 229 324 9 9 chrX 85714960 85715066 -80935230 + L1M2c LINE L1 2909 3014 -3831 2 1238 1719 210 86 39 chrX 85715119 85715865 -80934431 - RMER19B LTR ERVK 0 902 1 2 1238 800 215 0 0 chrX 85715898 85716033 -80934263 + B1_Mur4 SINE Alu 2 136 -14 2 1238 198 0 0 0 chrX 85716035 85716057 -80934239 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 2 1238 246 330 68 23 chrX 85716066 85716254 -80934042 + L1M2c LINE L1 3091 3293 -3552 2 1238 225 0 0 0 chrX 85716254 85716279 -80934017 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 2 1238 246 330 68 23 chrX 85716279 85716354 -80933942 + L1M2c LINE L1 3294 3366 -3479 2 1238 858 109 0 0 chrX 85716397 85716525 -80933771 + (TA)n Simple_repeat Simple_repeat 2 129 0 2 1238 1039 111 0 0 chrX 85716525 85716678 -80933618 - B2_Mm2 SINE B2 -42 153 1 2 1238 1566 189 9 76 chrX 85716677 85716772 -80933524 - ORR1B2 LTR MaLR -3 364 278 3 1238 2695 56 3 0 chrX 85716772 85717114 -80933182 + L1_Mus1 LINE L1 6223 6565 -2 3 1238 1566 189 9 76 chrX 85717114 85717361 -80932935 - ORR1B2 LTR MaLR -90 277 45 3 1238 567 125 0 0 chrX 85717703 85717791 -80932505 + ORR1D1 LTR MaLR 1 88 -286 3 1238 200 191 0 0 chrX 85718118 85718160 -80932136 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 3 1238 396 0 0 0 chrX 85719062 85719106 -80931190 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1238 733 214 13 33 chrX 85720342 85720492 -80929804 + B1_Mur2 SINE Alu 3 149 0 3 1239 5084 60 3 5 chrX 85721111 85721760 -80928536 - L1Md_F2 LINE L1 -5 6577 5930 3 1239 380 227 9 35 chrX 85721840 85721954 -80928342 + Lx2B LINE L1 6879 6989 -11 3 1239 2829 60 5 0 chrX 85721973 85722340 -80927956 - L1Md_F2 LINE L1 -1 6581 6213 3 1239 2533 231 61 43 chrX 85722387 85723306 -80926990 + L1_Mus1 LINE L1 261 1205 -5433 3 1239 29313 118 12 5 chrX 85723305 85728790 -80921506 + L1_Mus1 LINE L1 1073 6567 0 3 1239 869 306 49 76 chrX 85729936 85730590 -80919706 + L1M2 LINE L1 4719 5375 -768 3 1239 243 0 0 0 chrX 85730590 85730617 -80919679 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1239 836 306 49 76 chrX 85730617 85730742 -80919554 + L1M2 LINE L1 5353 5476 -404 3 1239 486 120 0 0 chrX 85730819 85730894 -80919402 + (TG)n Simple_repeat Simple_repeat 2 76 0 3 1239 2273 331 60 31 chrX 85730919 85732055 -80918241 + Lx8 LINE L1 6257 7425 -48 3 1239 24 53 0 0 chrX 85732138 85732176 -80918120 + AT_rich Low_complexity Low_complexity 1 38 0 3 1239 3963 155 39 3 chrX 85732676 85733351 -80916945 - Lx2B LINE L1 -3 6997 6299 3 1239 7133 94 12 1 chrX 85733400 85734805 -80915491 + L1_Mus1 LINE L1 5146 6567 0 3 1239 61 68 0 0 chrX 85735212 85735329 -80914967 + AT_rich Low_complexity Low_complexity 1 117 0 3 1239 473 327 1 2 chrX 85735798 85735943 -80914353 + MLT1A LTR MaLR 245 388 -2 3 1239 4370 149 49 2 chrX 85736973 85738142 -80912154 + L1VL4 LINE L1 724 1935 -1882 3 1239 1697 98 4 0 chrX 85738137 85738373 -80911923 - L1_Mus3 LINE L1 -419 6219 5983 3 1239 2604 111 10 3 chrX 85738373 85738763 -80911533 + L1_Mus3 LINE L1 6244 6636 -2 3 1239 2524 191 19 11 chrX 85738763 85739282 -80911014 + L1VL4 LINE L1 1922 2443 -1374 3 1239 6748 152 13 8 chrX 85739285 85740495 -80909801 + L1_Mur2 LINE L1 3596 4811 -1066 3 1239 5744 83 5 1 chrX 85740497 85741301 -80908995 + RLTR22_Mus LTR ERVK 1 807 -1001 3 1239 1456 122 81 8 chrX 85741557 85741805 -80908491 + RLTR22_Mus LTR ERVK 1543 1808 0 3 1239 3509 186 10 10 chrX 85741806 85742517 -80907779 + L1_Mur2 LINE L1 4829 5539 -347 3 1239 862 99 8 0 chrX 85742528 85742649 -80907647 + Lx2A LINE L1 6320 6441 -567 3 1239 319 183 0 16 chrX 85742649 85742710 -80907586 + MTB_Mm LTR MaLR 340 399 -8 3 1239 723 124 0 0 chrX 85742762 85742875 -80907421 + (TC)n Simple_repeat Simple_repeat 2 114 0 3 1239 15610 167 22 12 chrX 85742877 85746678 -80903618 - L1_Mus4 LINE L1 -2 6634 2792 3 1239 189 0 0 0 chrX 85746678 85746699 -80903597 + (TTG)n Simple_repeat Simple_repeat 1 21 0 3 1239 15610 183 25 9 chrX 85746699 85746755 -80903541 - L1_Mus4 LINE L1 -3092 2791 2736 3 1239 5379 128 32 6 chrX 85746758 85748185 -80902111 - L1VL2 LINE L1 -2082 1533 65 3 1239 912 294 83 32 chrX 85748284 85748622 -80901674 + MTE2b LTR MaLR 5 359 -20 3 1239 27 29 0 0 chrX 85749117 85749151 -80901145 + AT_rich Low_complexity Low_complexity 1 34 0 3 1239 248 0 31 0 chrX 85749474 85749506 -80900790 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1239 291 215 0 0 chrX 85749858 85749923 -80900373 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 1239 300 144 16 85 chrX 85750137 85750266 -80900030 + (TATAA)n Simple_repeat Simple_repeat 1 120 0 3 1239 4996 221 65 42 chrX 85750271 85753205 -80897091 - Lx6 LINE L1 -11 7449 4293 3 1239 3242 188 43 16 chrX 85753205 85753828 -80896468 - RLTR26 LTR ERVK 0 642 3 3 1239 281 197 33 0 chrX 85753830 85753891 -80896405 - Lx6 LINE L1 -1582 4298 4236 3 1239 1199 190 77 130 chrX 85753907 85754139 -80896157 + L1Md_F LINE L1 516 732 -5787 3 1239 320 98 0 0 chrX 85754139 85754200 -80896096 - L1Md_F2 LINE L1 0 6582 6522 3 1239 1199 190 77 130 chrX 85754200 85754329 -80895967 + L1Md_F LINE L1 733 858 -5661 3 1239 896 85 0 0 chrX 85754328 85754446 -80895850 - L1_Mus2 LINE L1 -239 6327 6210 3 1239 1560 91 9 4 chrX 85754446 85754678 -80895618 + L1_Mus2 LINE L1 6332 6564 -2 3 1239 1458 191 7 103 chrX 85754682 85754814 -80895482 + L1Md_F3 LINE L1 934 1056 -5601 3 1239 7278 17 1 0 chrX 85754814 85755635 -80894661 - RLTR13B2 LTR ERVK 0 822 1 3 1239 21186 108 19 68 chrX 85755635 85761445 -80888851 + L1Md_F3 LINE L1 459 6222 -362 3 1239 402 240 40 30 chrX 85761445 85761544 -80888752 - ORR1D2 LTR MaLR -270 100 1 3 1239 225 246 56 42 chrX 85761602 85761674 -80888622 - MLT1J1 LTR MaLR -300 144 72 3 1239 247 303 0 29 chrX 85761715 85761783 -80888513 - ID4_ SINE ID 0 83 18 3 1239 593 262 8 16 chrX 85762374 85762502 -80887794 - B1_Mur2 SINE Alu -20 129 3 3 1239 333 162 43 14 chrX 85762640 85762709 -80887587 - B1_Mur4 SINE Alu 0 150 80 3 1239 8321 85 0 3 chrX 85762871 85763999 -80886297 + Lx5 LINE L1 4461 5586 -297 3 1239 7331 80 2 5 chrX 85763999 85764997 -80885299 + L1Md_F2 LINE L1 5588 6582 0 3 1239 8321 243 20 800 chrX 85764997 85765352 -80884944 + Lx5 LINE L1 5583 5930 -1714 3 1239 6245 200 42 5 chrX 85765466 85767788 -80882508 + Lx4B LINE L1 4622 7051 -7 3 1239 290 26 0 25 chrX 85767924 85767964 -80882332 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1239 288 0 0 0 chrX 85768195 85768227 -80882069 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 1239 369 296 0 61 chrX 85768268 85768383 -80881913 - PB1D7 SINE Alu -8 112 5 3 1239 8107 157 3 8 chrX 85768597 85770026 -80880270 - L1_Mm LINE L1 -923 4960 3539 3 1239 1267 198 34 19 chrX 85770216 85770479 -80879817 + ORR1D1 LTR MaLR 103 369 -5 3 1239 1254 264 42 37 chrX 85770613 85770739 -80879557 + Lx5 LINE L1 6692 6816 -234 3 1239 1729 184 9 58 chrX 85770739 85771085 -80879211 - ORR1A4 LTR MaLR 0 329 1 3 1239 1254 264 42 37 chrX 85771085 85771312 -80878984 + Lx5 LINE L1 6817 7047 -3 3 1239 440 88 15 0 chrX 85771463 85771531 -80878765 - L1_Mm LINE L1 -2631 3252 3184 3 1239 2598 42 39 3 chrX 85771531 85771863 -80878433 + L1Md_F2 LINE L1 6236 6579 -3 3 1239 2084 221 65 24 chrX 85771911 85772360 -80877936 + RLTR20B2 LTR ERVK 1 463 -97 3 1239 294 29 0 0 chrX 85772360 85772395 -80877901 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1239 2084 221 65 24 chrX 85772395 85772483 -80877813 + RLTR20B2 LTR ERVK 464 559 -1 3 1239 323 301 40 20 chrX 85773095 85773244 -80877052 + HAL1b LINE L1 1510 1661 -348 3 1239 319 214 0 14 chrX 85773398 85773469 -80876827 + MLT1A1 LTR MaLR 336 405 -3 3 1239 966 233 87 0 chrX 85773558 85773811 -80876485 + Lx9 LINE L1 7151 7425 -219 3 1239 519 17 0 0 chrX 85774273 85774333 -80875963 + (TTA)n Simple_repeat Simple_repeat 1 60 0 3 1239 280 394 45 0 chrX 85774788 85774943 -80875353 + MLT1H2 LTR MaLR 99 260 -229 3 1239 981 247 51 81 chrX 85775046 85775319 -80874977 + RLTR18B LTR ERVK 1 265 -247 3 1239 1589 212 0 3 chrX 85775317 85775601 -80874695 + RLTR18B LTR ERVK 222 504 -8 3 1239 251 280 65 0 chrX 85775610 85775703 -80874593 + L1MA8 LINE L1 6135 6233 -58 3 1239 594 0 0 0 chrX 85778142 85778208 -80872088 + (CAAAA)n Simple_repeat Simple_repeat 2 67 0 3 1239 883 49 57 8 chrX 85778208 85778325 -80871971 - L1_Mus2 LINE L1 -613 5953 5830 3 1239 227 221 23 105 chrX 85778326 85778412 -80871884 - MER5A DNA MER1_type -110 79 1 3 1239 24 53 0 0 chrX 85778736 85778774 -80871522 + AT_rich Low_complexity Low_complexity 1 38 0 3 1239 21 36 0 0 chrX 85779601 85779629 -80870667 + AT_rich Low_complexity Low_complexity 1 28 0 3 1239 748 93 0 0 chrX 85781361 85781469 -80868827 + L1_Mus2 LINE L1 6459 6566 0 3 1239 2682 41 0 15 chrX 85782145 85782488 -80867808 - ORR1A1 LTR MaLR -8 338 1 3 1239 11711 88 12 5 chrX 85782488 85784207 -80866089 - ORR1A1-int LTR MaLR 0 1792 62 3 1239 3866 77 22 13 chrX 85784207 85784746 -80865550 + L1Md_F2 LINE L1 6039 6582 0 3 1239 234 254 13 107 chrX 85785016 85785091 -80865205 + ORR1D2 LTR MaLR 267 334 -36 3 1239 312 176 0 0 chrX 85785423 85785484 -80864812 - Lx3C LINE L1 -457 6543 6486 3 1239 4567 178 42 15 chrX 85785640 85786514 -80863782 - Lx4A LINE L1 -5 7053 6156 3 1239 532 317 66 0 chrX 85788225 85788392 -80861904 - B3A SINE B2 -14 184 7 3 1239 4614 84 0 10 chrX 85788525 85788827 -80861469 - L1_Mus1 LINE L1 0 6567 6316 3 1239 3387 28 2 0 chrX 85788827 85789222 -80861074 + MTA_Mm LTR MaLR 1 396 0 3 1239 4614 84 0 10 chrX 85789222 85789579 -80860717 - L1_Mus1 LINE L1 -252 6315 5959 3 1239 246 299 32 52 chrX 85789581 85789736 -80860560 - MLT1B LTR MaLR -165 225 74 3 1239 2341 104 9 0 chrX 85789736 85790063 -80860233 - L1_Mm LINE L1 -64 5819 5490 3 1239 6595 124 2 1 chrX 85790062 85791032 -80859264 + L1_Mus3 LINE L1 5659 6629 -9 3 1239 238 254 54 40 chrX 85791567 85791641 -80858655 + L1VL2 LINE L1 443 517 -5818 3 1239 1228 162 4 18 chrX 85791753 85791979 -80858317 + Lx2B LINE L1 3647 3869 -2008 3 1239 1568 131 26 7 chrX 85791980 85792250 -80858046 - L1_Mur2 LINE L1 -1245 4632 4358 3 1239 7802 158 30 6 chrX 85792253 85793840 -80856456 + Lx2B LINE L1 5377 6999 -1 3 1239 312 149 0 0 chrX 85794284 85794331 -80855965 - ORR1A2 LTR MaLR -8 386 340 3 1239 8065 41 5 0 chrX 85794362 85795402 -80854894 - L1Md_F3 LINE L1 -12 6572 5528 3 1239 1091 217 27 96 chrX 85795402 85795703 -80854593 - ORR1A2 LTR MaLR -40 287 8 3 1239 1148 68 0 14 chrX 85795704 85795852 -80854444 + B1_Mus2 SINE Alu 2 147 0 3 1239 310 335 70 30 chrX 85797674 85797874 -80852422 + L1MEg1 LINE L1 138 345 -5890 3 1239 369 355 161 57 chrX 85798022 85798532 -80851764 - MLT1G1 LTR MaLR 0 579 17 3 1239 868 273 16 5 chrX 85798669 85798853 -80851443 + B3 SINE B2 1 186 -30 3 1239 528 16 0 0 chrX 85798855 85798916 -80851380 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 1239 343 239 7 15 chrX 85799039 85799175 -80851121 + GA-rich Low_complexity Low_complexity 4 138 0 3 1239 497 168 9 0 chrX 85799232 85799339 -80850957 + (CA)n Simple_repeat Simple_repeat 1 108 0 3 1239 1868 170 39 0 chrX 85799377 85799736 -80850560 + Lx2 LINE L1 6623 6995 -2 3 1239 387 0 0 0 chrX 85799752 85799795 -80850501 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1239 2457 34 0 7 chrX 85800127 85800426 -80849870 + L1Md_F2 LINE L1 6265 6561 -21 3 1239 339 25 0 0 chrX 85800426 85800466 -80849830 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 1239 28833 134 47 36 chrX 85800566 85801689 -80848607 + L1_Mus1 LINE L1 411 1549 -4334 3 1239 1062 102 0 0 chrX 85801689 85801836 -80848460 + B1_Mm SINE Alu 1 147 0 4 1239 28833 115 6 21 chrX 85801836 85806940 -80843356 + L1_Mus1 LINE L1 1550 6566 -1 3 1239 3427 28 2 0 chrX 85807001 85807396 -80842900 + MTA_Mm LTR MaLR 1 396 0 4 1239 3253 54 0 2 chrX 85807396 85807822 -80842474 + MTA_Mm-int LTR MaLR 1 425 -673 4 1239 34696 33 6 0 chrX 85807831 85812740 -80837556 - L1Md_A LINE L1 0 6582 1647 4 1239 934 9 0 0 chrX 85812740 85812848 -80837448 + MTA_Mm LTR MaLR 289 396 0 4 1239 307 279 0 31 chrX 85812848 85812918 -80837378 + RMER6D LTR ERVK 642 708 -12 4 1239 231 140 33 66 chrX 85813221 85813282 -80837014 + Charlie9 DNA MER1_type 982 1040 -1717 4 1239 456 314 76 15 chrX 85813416 85813613 -80836683 - B3 SINE B2 -6 210 2 4 1239 280 260 0 2 chrX 85815072 85815142 -80835154 + MTEa LTR MaLR 9 77 -302 4 1239 800 358 56 16 chrX 85815267 85815645 -80834651 - MLT1D LTR MaLR -6 499 107 4 1239 335 312 0 18 chrX 85815636 85815747 -80834549 + LTR40a LTR ERVL 409 517 -2 4 1239 22 0 0 0 chrX 85818492 85818514 -80831782 + AT_rich Low_complexity Low_complexity 1 22 0 4 1239 6294 129 45 46 chrX 85819218 85820358 -80829938 - Lx3_Mus LINE L1 0 7009 5871 4 1239 14887 90 6 11 chrX 85820358 85822496 -80827800 + Lx3_Mus LINE L1 3749 5875 -11 4 1239 683 117 0 0 chrX 85822542 85822653 -80827643 + L1_Mus2 LINE L1 6456 6566 0 4 1239 11621 29 2 4 chrX 85822916 85824308 -80825988 + L1Md_T LINE L1 4198 5586 -297 4 1239 8246 44 0 0 chrX 85824308 85825304 -80824992 + L1Md_T LINE L1 5587 6582 0 4 1239 203 184 0 0 chrX 85825363 85825401 -80824895 + A-rich Low_complexity Low_complexity 1 38 0 4 1239 2156 132 17 41 chrX 85825435 85825854 -80824442 + RLTR9E LTR ERVK 1 409 0 4 1239 616 272 26 58 chrX 85825856 85826164 -80824132 + MMETn-int LTR ERVK 2 299 -4545 4 1239 317 127 0 18 chrX 85826154 85826210 -80824086 + RLTR45-int LTR ERVK 2091 2145 -5099 4 1239 864 157 103 11 chrX 85826657 85826831 -80823465 + ETnERV2-int LTR ERVK 141 330 -5076 4 1239 617 169 8 17 chrX 85826813 85826933 -80823363 + ETnERV2-int LTR ERVK 669 787 -4619 4 1239 2790 157 82 16 chrX 85826921 85827503 -80822793 + ETnERV2-int LTR ERVK 1466 2086 -5320 4 1239 2218 173 9 102 chrX 85827535 85828361 -80821935 + ETnERV2-int LTR ERVK 2666 3141 -1703 4 1239 445 99 5 19 chrX 85828566 85828659 -80821637 + ETnERV2-int LTR ERVK 7330 7382 -24 4 1239 1928 137 97 29 chrX 85828660 85829043 -80821253 + RLTR9E LTR ERVK 1 409 0 4 1239 411 21 0 0 chrX 85829489 85829537 -80820759 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 1239 915 129 14 0 chrX 85829544 85829684 -80820612 - Lx9 LINE L1 -180 7464 7323 4 1239 1837 207 82 101 chrX 85829684 85830308 -80819988 + RMER6C LTR ERVK 1 690 0 4 1239 1315 239 6 29 chrX 85830310 85830625 -80819671 - Lx9 LINE L1 -318 7326 7019 4 1239 491 45 0 15 chrX 85830768 85830835 -80819461 + (TTCC)n Simple_repeat Simple_repeat 3 68 0 4 1239 520 240 203 16 chrX 85830946 85831128 -80819168 + B3 SINE B2 1 216 0 4 1239 794 205 45 49 chrX 85831816 85832083 -80818213 - RMER17C LTR ERVK -141 269 4 4 1239 1361 161 48 20 chrX 85832086 85832334 -80817962 - IAPEY3-int LTR ERVK 0 3238 2984 4 1239 243 288 0 0 chrX 85832334 85832445 -80817851 + (TCTG)n Simple_repeat Simple_repeat 2 112 0 4 1239 1683 185 54 3 chrX 85832445 85832776 -80817520 - IAPEY3-int LTR ERVK -240 2998 2651 4 1239 1817 212 200 30 chrX 85832788 85833358 -80816938 - Lx4B LINE L1 -518 6540 5874 4 1239 3249 181 19 0 chrX 85833361 85833941 -80816355 + Lx4B LINE L1 5261 5851 -26 4 1239 865 110 71 0 chrX 85834679 85834834 -80815462 - L1_Mus3 LINE L1 -8 6630 6465 4 1239 2127 77 30 20 chrX 85834853 85835157 -80815139 - IAPLTR2b LTR ERVK -20 307 1 4 1239 8133 227 23 33 chrX 85835157 85837072 -80813224 - IAPLTR3-int LTR ERVK -20 6801 4906 4 1239 1797 88 4 0 chrX 85837069 85837308 -80812988 - IAPEY3-int LTR ERVK -5183 2497 2258 4 1239 400 70 0 0 chrX 85837313 85837370 -80812926 - B1_Mus1 SINE Alu -91 57 1 4 1239 2024 54 35 0 chrX 85837370 85837629 -80812667 - IAPLTR4_I LTR ERVK -288 1182 915 4 1239 2484 134 18 13 chrX 85837615 85838071 -80812225 - IAPEz-int LTR ERVK -5904 577 1 4 1239 2120 68 27 17 chrX 85838093 85838393 -80811903 - IAPLTR2b LTR ERVK -24 303 1 4 1239 2867 98 5 5 chrX 85838393 85838793 -80811503 - L1_Mus3 LINE L1 -168 6470 6071 4 1239 5350 83 63 3 chrX 85838793 85839555 -80810741 + RLTR13D5 LTR ERVK 1 808 -215 4 1239 4796 112 80 1 chrX 85839559 85840422 -80809874 - L1_Mus3 LINE L1 -572 6066 5136 4 1239 306 0 0 0 chrX 85840745 85840779 -80809517 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 4 1239 195 42 0 0 chrX 85840874 85840898 -80809398 + (TA)n Simple_repeat Simple_repeat 1 24 0 4 1239 279 0 0 0 chrX 85841220 85841251 -80809045 + (T)n Simple_repeat Simple_repeat 1 31 0 4 1239 5137 231 71 46 chrX 85841411 85842837 -80807459 - Lx7 LINE L1 -2 7694 6233 4 1239 1399 220 65 3 chrX 85842843 85843167 -80807129 + ORR1C2 LTR MaLR 5 348 -36 4 1239 2416 227 11 14 chrX 85843168 85843989 -80806307 - Lx7 LINE L1 -1524 6172 5353 4 1239 1160 266 84 19 chrX 85843984 85844363 -80805933 - Lx6 LINE L1 0 7460 7057 4 1239 403 315 24 115 chrX 85844440 85844841 -80805455 + L1VL2 LINE L1 138 474 -5944 4 1239 451 304 19 6 chrX 85844917 85845079 -80805217 + L1_Mus2 LINE L1 670 833 -5783 4 1239 27003 143 32 44 chrX 85845058 85846470 -80803826 + L1_Mus2 LINE L1 725 2070 -3813 4 1239 363 44 0 0 chrX 85846470 85846515 -80803781 + (CAA)n Simple_repeat Simple_repeat 2 46 0 4 1239 27003 121 45 2 chrX 85846515 85850775 -80799521 + L1_Mus2 LINE L1 2071 6566 0 4 154 9079 210 147 31 chrX 85850793 85853327 -80796969 - L1_Mur3 LINE L1 -601 5279 2429 4 1240 2716 133 0 16 chrX 85853327 85853756 -80796540 + L1_Mus4 LINE L1 6215 6636 0 4 1240 9079 210 147 31 chrX 85853756 85854081 -80796215 - L1_Mur3 LINE L1 -3452 2428 2091 4 1240 198 0 0 0 chrX 85854094 85854116 -80796180 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 1240 316 297 62 55 chrX 85854315 85854511 -80795785 - L1MCa LINE L1 -2103 4218 4017 4 1240 512 262 0 80 chrX 85854511 85854673 -80795623 - B1_Mur2 SINE Alu 0 149 1 4 1240 316 297 62 55 chrX 85854673 85854768 -80795528 - L1MCa LINE L1 -2305 4016 3925 4 1240 292 314 34 8 chrX 85854778 85854897 -80795399 - L1MCa LINE L1 -6371 137 16 4 1240 814 271 58 15 chrX 85854916 85855122 -80795174 - B3 SINE B2 -1 215 1 4 1240 913 293 162 54 chrX 85856771 85857340 -80792956 - MT2A LTR ERVL -8 593 5 4 1240 1497 99 0 0 chrX 85857607 85857818 -80792478 + L1_Mus1 LINE L1 6355 6565 -2 4 1240 24 0 0 0 chrX 85858439 85858463 -80791833 + AT_rich Low_complexity Low_complexity 1 24 0 4 1240 8101 171 17 5 chrX 85859542 85861691 -80788605 + Lx2 LINE L1 4832 6997 0 4 1240 2851 184 2 27 chrX 85861784 85862061 -80788235 + L1_Mus2 LINE L1 705 941 -5675 4 1240 4778 55 0 0 chrX 85862061 85862648 -80787648 + L1Md_F2 LINE L1 5984 6570 -12 4 1240 16959 211 14 72 chrX 85862648 85865865 -80784431 + L1_Mus2 LINE L1 942 4190 -1690 4 1240 378 0 0 0 chrX 85865865 85865907 -80784389 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1240 16959 217 17 80 chrX 85865907 85866203 -80784093 + L1_Mus2 LINE L1 4191 4215 -1665 4 1240 4161 108 5 0 chrX 85866203 85866804 -80783492 + L1_Mus1 LINE L1 5961 6564 -3 4 1240 16959 175 24 50 chrX 85866804 85869178 -80781118 + L1_Mus2 LINE L1 4216 6936 -72 4 1240 1213 35 0 0 chrX 85869178 85869319 -80780977 + B1_Mm SINE Alu 1 141 -6 4 1240 1038 322 102 44 chrX 85869319 85869392 -80780904 + L1_Mus2 LINE L1 6937 7003 -5 4 1240 3892 118 2 10 chrX 85869440 85870032 -80780264 - L1_Mm LINE L1 -168 5715 5129 4 1240 1892 108 7 7 chrX 85870032 85870322 -80779974 + L1_Mus3 LINE L1 6344 6633 -5 4 1240 7138 121 12 9 chrX 85870692 85871781 -80778515 - Lx3A LINE L1 -124 6857 5766 4 1240 21 0 0 0 chrX 85875346 85875367 -80774929 + AT_rich Low_complexity Low_complexity 1 21 0 4 1240 309 296 121 69 chrX 85875469 85875585 -80774711 + RMER20B LTR ERVK 3 124 -503 4 1240 590 278 88 10 chrX 85876085 85876278 -80774018 + MERVK26-int LTR ERVK 150 357 -6562 4 1240 6309 191 65 33 chrX 85876922 85879350 -80770946 - Lx2 LINE L1 -11 6986 4473 4 1240 462 158 37 0 chrX 85879350 85879432 -80770864 + Lx2 LINE L1 4370 4454 -1423 4 1240 1221 277 12 12 chrX 85879624 85879949 -80770347 - RLTR1 LTR ERV1 0 624 300 4 1240 721 69 0 0 chrX 85879950 85880052 -80770244 + L1_Mus2 LINE L1 6464 6565 -1 4 1240 1078 377 54 40 chrX 85880151 85882012 -80768284 + MERVK26-int LTR ERVK 2337 4223 -2696 4 1240 1953 66 0 0 chrX 85882485 85882729 -80767567 - L1_Mus1 LINE L1 -1 6566 6323 4 1240 1337 155 5 5 chrX 85882898 85883112 -80767184 + L1VL1 LINE L1 1 214 -6208 4 1240 10873 78 21 4 chrX 85883105 85884685 -80765611 + L1_Mm LINE L1 1458 3064 -2819 4 1240 4403 96 6 16 chrX 85884685 85885328 -80764968 + L1Md_F2 LINE L1 5945 6581 -1 4 1240 32 0 0 0 chrX 85885386 85885418 -80764878 + AT_rich Low_complexity Low_complexity 1 32 0 4 1240 24 0 0 0 chrX 85885824 85885848 -80764448 + AT_rich Low_complexity Low_complexity 1 24 0 4 1240 1029 92 0 7 chrX 85885926 85886069 -80764227 - B1_Mm SINE Alu -5 142 1 4 1240 471 255 56 56 chrX 85886306 85886501 -80763795 + B3A SINE B2 1 195 -3 4 1240 24 32 0 0 chrX 85887222 85887253 -80763043 + AT_rich Low_complexity Low_complexity 1 31 0 4 1240 399 248 18 62 chrX 85887276 85887288 -80763008 - B1_Mur4 SINE Alu 0 150 140 4 1240 318 50 0 0 chrX 85887288 85887328 -80762968 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 4 1240 399 248 18 62 chrX 85887328 85887427 -80762869 - B1_Mur4 SINE Alu -11 139 44 4 1240 24 32 0 0 chrX 85887434 85887465 -80762831 + AT_rich Low_complexity Low_complexity 1 31 0 4 1240 29 28 0 0 chrX 85887749 85887785 -80762511 + AT_rich Low_complexity Low_complexity 1 36 0 4 1240 273 270 108 43 chrX 85887811 85887904 -80762392 + B1F SINE Alu 17 115 -34 4 1240 890 282 120 22 chrX 85888286 85888736 -80761560 - Lx7 LINE L1 -1327 6369 5876 4 1240 4960 169 30 5 chrX 85888796 85889733 -80760563 - Lx2 LINE L1 -1 6996 6037 4 1240 608 277 94 69 chrX 85889965 85890357 -80759939 - L1M2 LINE L1 -521 5791 5390 4 1240 254 162 0 0 chrX 85890805 85890855 -80759441 - L1_Mur2 LINE L1 -3323 2563 2505 4 1240 585 335 13 13 chrX 85890902 85891129 -80759167 + Lx7 LINE L1 6383 6609 -1087 4 1240 546 218 0 0 chrX 85891136 85891237 -80759059 + MTC LTR MaLR 2 102 -319 4 1240 853 9 19 0 chrX 85891249 85891355 -80758941 + (TCTA)n Simple_repeat Simple_repeat 3 110 0 4 1240 1714 191 17 11 chrX 85891367 85891722 -80758574 - Lx4B LINE L1 -17 7041 6685 4 1240 664 280 11 6 chrX 85891722 85891905 -80758391 - Lx7 LINE L1 -761 6935 6752 4 1240 1180 314 46 5 chrX 85891926 85892298 -80757998 + Lx7 LINE L1 6928 7314 -382 4 1240 396 103 0 0 chrX 85892301 85892359 -80757937 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1240 295 208 26 0 chrX 85892361 85892438 -80757858 + T-rich Low_complexity Low_complexity 3 81 0 4 1240 764 311 65 31 chrX 85892877 85893201 -80757095 - ORR1D2 LTR MaLR 0 359 1 4 1240 2528 290 105 134 chrX 85893201 85894612 -80755684 - ORR1D2-int LTR MaLR 0 1370 1 4 1240 572 305 32 114 chrX 85894612 85894914 -80755382 - ORR1D2 LTR MaLR 0 370 82 4 1240 225 0 0 0 chrX 85894914 85894939 -80755357 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 4 1240 572 305 32 114 chrX 85894939 85895039 -80755257 - ORR1D2 LTR MaLR -289 81 1 4 1240 555 277 75 45 chrX 85895058 85895326 -80754970 - Lx8 LINE L1 -2 7471 7196 4 1240 1748 178 3 61 chrX 85895943 85896289 -80754007 - ORR1A3 LTR MaLR -1 326 1 4 1240 9527 148 24 84 chrX 85896289 85897518 -80752778 - ORR1A3-int LTR MaLR 0 1963 749 4 1240 3056 81 26 49 chrX 85897518 85898011 -80752285 + RLTR45 LTR ERVK 1 482 0 4 1240 9527 148 24 84 chrX 85898011 85898555 -80751741 - ORR1A3-int LTR MaLR -1215 748 312 4 1240 822 55 8 8 chrX 85898555 85898682 -80751614 - L1Md_F3 LINE L1 0 6584 6458 4 1240 9527 148 24 84 chrX 85898682 85898824 -80751472 - ORR1A3-int LTR MaLR -1652 311 165 4 1240 1893 205 145 21 chrX 85898835 85899318 -80750978 + RLTR25B LTR ERVK 1 543 -485 4 1240 1570 142 242 6 chrX 85899318 85899644 -80750652 + RLTR9D LTR ERVK 1 403 0 4 1240 244 203 114 14 chrX 85899653 85899723 -80750573 + RLTR25B LTR ERVK 598 674 -354 4 1240 969 222 188 7 chrX 85899711 85899834 -80750462 + RLTR25B LTR ERVK 777 911 -192 4 1240 549 94 0 0 chrX 85899834 85899919 -80750377 + (CA)n Simple_repeat Simple_repeat 2 86 0 5 1240 969 222 188 7 chrX 85899919 85900072 -80750224 + RLTR25B LTR ERVK 912 1103 0 4 1240 805 148 75 140 chrX 85900072 85900267 -80750029 - ORR1A3-int LTR MaLR -1782 181 2 4 1240 1945 148 25 16 chrX 85900268 85900591 -80749705 - ORR1A3 LTR MaLR 0 326 1 4 1240 213 121 0 0 chrX 85900701 85900734 -80749562 + (TC)n Simple_repeat Simple_repeat 2 34 0 5 1240 243 88 0 0 chrX 85900734 85900768 -80749528 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1240 575 277 5 80 chrX 85901418 85901630 -80748666 - B3A SINE B2 0 198 3 5 1240 505 107 60 0 chrX 85901842 85901926 -80748370 - L1_Mur3 LINE L1 -1165 4715 4627 5 1240 423 0 0 0 chrX 85901945 85901992 -80748304 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1240 1439 225 20 27 chrX 85901992 85902386 -80747910 - L1_Mur3 LINE L1 -3240 2640 2249 5 1240 4651 202 19 66 chrX 85902397 85902828 -80747468 + L1_Mur3 LINE L1 4757 5187 -693 5 1240 7435 7 2 0 chrX 85902828 85903648 -80746648 - RLTR13B2 LTR ERVK 0 822 1 5 1240 4651 202 19 66 chrX 85903648 85904297 -80745999 + L1_Mur3 LINE L1 5188 5789 -91 5 1240 5585 148 13 2 chrX 85904297 85905210 -80745086 + Lx2A1 LINE L1 6080 7002 -6 5 1240 4651 202 19 66 chrX 85905210 85905300 -80744996 + L1_Mur3 LINE L1 5790 5873 -7 5 1240 2112 284 29 26 chrX 85905307 85905921 -80744375 + Lx6 LINE L1 6841 7456 -4 5 1240 277 280 72 0 chrX 85906445 85906570 -80743726 - L1M2 LINE L1 -1556 4587 4454 5 1240 7297 86 7 0 chrX 85906864 85907983 -80742313 - L1_Mus1 LINE L1 0 6567 5442 5 1240 260 324 140 5 chrX 85908076 85908290 -80742006 - L1M2 LINE L1 -1734 4406 4164 5 1240 5076 232 72 23 chrX 85908296 85909674 -80740622 - Lx7 LINE L1 -723 6973 5527 5 1240 306 273 0 0 chrX 85909732 85909831 -80740465 + T-rich Low_complexity Low_complexity 1 99 0 5 1240 436 314 92 70 chrX 85909891 85910291 -80740005 - MER20B DNA MER1_type -152 631 223 5 1240 188 212 15 0 chrX 85910486 85910552 -80739744 + (TA)n Simple_repeat Simple_repeat 1 67 0 5 1240 258 136 0 0 chrX 85910580 85910624 -80739672 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1240 372 43 0 0 chrX 85911523 85911569 -80738727 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1240 243 0 0 0 chrX 85911569 85911595 -80738701 + (GA)n Simple_repeat Simple_repeat 1 27 0 5 1240 2980 89 0 2 chrX 85912057 85912463 -80737833 + L1Md_F2 LINE L1 6166 6570 -12 5 1240 324 0 0 0 chrX 85912471 85912507 -80737789 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 1240 590 230 47 24 chrX 85912913 85913082 -80737214 - Lx6 LINE L1 -1397 6063 5891 5 1240 1498 304 47 9 chrX 85913072 85913722 -80736574 + Lx6 LINE L1 6394 7098 -598 5 1240 243 0 0 0 chrX 85913738 85913765 -80736531 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1240 320 328 139 50 chrX 85914531 85914833 -80735463 - L1MC4 LINE L1 -251 7791 7463 5 1240 283 98 0 0 chrX 85915289 85915330 -80734966 - 5S rRNA rRNA -31 90 50 5 1240 7098 89 1 5 chrX 85915330 85916288 -80734008 + L1_Mus2 LINE L1 5612 6565 -1 5 1240 200 274 58 35 chrX 85916592 85916679 -80733617 + MIR SINE MIR 88 176 -86 5 1240 21 57 0 0 chrX 85916696 85916731 -80733565 + AT_rich Low_complexity Low_complexity 1 35 0 5 1240 24 32 0 0 chrX 85916985 85917016 -80733280 + AT_rich Low_complexity Low_complexity 1 31 0 5 1240 228 86 32 65 chrX 85917294 85917356 -80732940 + (TCTCTG)n Simple_repeat Simple_repeat 6 65 0 5 1240 201 316 41 21 chrX 85917516 85917613 -80732683 - L3 LINE CR1 -111 4378 4280 5 1240 2042 94 24 33 chrX 85917666 85917994 -80732302 + RLTR44D LTR ERVK 148 472 -14 5 1240 359 331 82 42 chrX 85917994 85918227 -80732069 + B4A SINE B4 1 274 -18 5 1240 296 289 0 24 chrX 85918671 85918756 -80731540 + RSINE1 SINE B4 14 96 -69 5 1240 510 17 0 0 chrX 85918852 85918911 -80731385 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 1240 30161 67 45 31 chrX 85919115 85923163 -80727133 + L1Md_F3 LINE L1 422 4649 -1234 5 1240 4594 84 8 2 chrX 85923163 85923796 -80726500 + L1Md_F3 LINE L1 5934 6570 -14 5 1240 30161 56 53 36 chrX 85923796 85924678 -80725618 + L1Md_F3 LINE L1 4650 5585 -298 5 1240 7469 59 12 3 chrX 85924679 85925667 -80724629 + L1Md_F3 LINE L1 5587 6583 -1 5 1240 6225 65 106 0 chrX 85925677 85926543 -80723753 + L1Md_F3 LINE L1 4628 5585 -298 5 1240 7469 59 12 3 chrX 85926544 85927532 -80722764 + L1Md_F3 LINE L1 5587 6583 -1 5 1240 7861 72 1 0 chrX 85927542 85928576 -80721720 + L1_Mm LINE L1 4628 5662 -221 5 1240 4591 52 19 5 chrX 85928578 85929173 -80721123 + L1Md_F3 LINE L1 5982 6584 0 5 1240 186 43 0 0 chrX 85929179 85929202 -80721094 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 5 1240 257 51 0 25 chrX 85929225 85929265 -80721031 + (TATG)n Simple_repeat Simple_repeat 2 40 0 5 1240 1301 316 82 39 chrX 85929267 85930099 -80720197 - Lx6 LINE L1 -26 7434 6222 5 1240 21 71 0 0 chrX 85931144 85931186 -80719110 + AT_rich Low_complexity Low_complexity 1 42 0 5 1240 18314 180 20 26 chrX 85931423 85934768 -80715528 + L1VL4 LINE L1 555 3863 -2020 5 1240 306 50 0 0 chrX 85934768 85934808 -80715488 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1240 18314 175 22 28 chrX 85934808 85936007 -80714289 + L1VL4 LINE L1 3864 5070 -813 5 1240 2273 216 8 16 chrX 85936228 85936258 -80714038 - L1_Mur1 LINE L1 -321 5565 5537 5 1240 3387 35 2 0 chrX 85936258 85936653 -80713643 - MTA_Mm LTR MaLR 0 396 1 5 1240 2273 216 8 16 chrX 85936653 85937126 -80713170 - L1_Mur1 LINE L1 -350 5536 5066 5 1240 6549 183 15 9 chrX 85937137 85938330 -80711966 - Lx3B LINE L1 -42 6931 5732 5 1240 19923 157 16 36 chrX 85938341 85942915 -80707381 - Lx3B LINE L1 -880 5006 526 5 1240 23 33 0 0 chrX 85942929 85942959 -80707337 + AT_rich Low_complexity Low_complexity 1 30 0 5 1240 441 0 0 0 chrX 85943017 85943066 -80707230 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1240 433 345 14 0 chrX 85943188 85943327 -80706969 - B1F1 SINE Alu -8 141 1 5 1240 3627 37 0 2 chrX 85943446 85943883 -80706413 - L1Md_T LINE L1 0 6582 6147 5 1240 708 45 0 0 chrX 85944143 85944231 -80706065 + (TC)n Simple_repeat Simple_repeat 1 88 0 5 1240 505 234 57 21 chrX 85944601 85944741 -80705555 + MLT1B LTR MaLR 246 390 0 5 1240 6686 156 13 6 chrX 85945579 85947241 -80703055 - L1_Mus4 LINE L1 -9 6627 4956 5 1240 7727 204 17 21 chrX 85947237 85949997 -80700299 + Lx2 LINE L1 4244 6984 -13 5 1240 1088 254 36 4 chrX 85950023 85950299 -80699997 - Lx7 LINE L1 -1691 6005 5721 5 1240 397 314 26 55 chrX 85950855 85951165 -80699131 + L1_Mur3 LINE L1 852 1152 -6560 5 1240 1952 162 0 13 chrX 85951188 85951500 -80698796 + L1VL2 LINE L1 116 423 -5912 5 1240 495 231 9 9 chrX 85951478 85951587 -80698709 + L1VL2 LINE L1 300 408 -5927 5 1240 9822 115 24 40 chrX 85951573 85953306 -80696990 + MusHAL1 LINE L1 248 1951 -761 5 1240 287 301 24 16 chrX 85953624 85953749 -80696547 - RLTR15 LTR ERVK -231 128 3 5 1240 3220 179 69 47 chrX 85953827 85954931 -80695365 + Lx3_Mus LINE L1 3 1382 -4504 5 1240 17323 107 17 25 chrX 85954929 85958512 -80691784 + Lx3_Mus LINE L1 3220 6785 -224 5 1240 456 19 0 0 chrX 85958512 85958565 -80691731 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1240 8353 119 55 6 chrX 85958565 85958751 -80691545 + Lx3_Mus LINE L1 6786 6982 -27 5 1240 609 14 0 0 chrX 85958751 85958821 -80691475 + (TA)n Simple_repeat Simple_repeat 2 71 0 5 1240 1431 316 26 38 chrX 85958837 85959341 -80690955 + MTC-int LTR MaLR 1 498 -760 5 1240 1895 93 30 27 chrX 85959489 85959786 -80690510 - L1_Mus2 LINE L1 -344 6222 5925 5 1240 2511 91 6 3 chrX 85959786 85960138 -80690158 + L1_Mus2 LINE L1 6214 6566 0 5 1240 243 0 0 0 chrX 85960270 85960297 -80689999 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1240 1189 41 0 0 chrX 85960297 85960443 -80689853 - B1_Mm SINE Alu 0 147 2 5 1240 7735 59 3 2 chrX 85960509 85961535 -80688761 + L1_Mus1 LINE L1 5541 6567 0 5 1240 376 248 181 63 chrX 85961558 85961790 -80688506 + RLTR41 LTR ERV1 254 461 -71 5 1240 1837 271 48 110 chrX 85961796 85962585 -80687711 + MTC-int LTR MaLR 510 1249 -9 5 1240 531 0 0 0 chrX 85963279 85963338 -80686958 + (TC)n Simple_repeat Simple_repeat 2 60 0 5 1240 30 59 0 0 chrX 85963453 85963504 -80686792 + AT_rich Low_complexity Low_complexity 1 51 0 5 1240 419 298 29 87 chrX 85964010 85964163 -80686133 + RSINE1 SINE B4 2 147 -18 5 1240 209 30 0 57 chrX 85964163 85964198 -80686098 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 5 1240 419 298 29 87 chrX 85964198 85964217 -80686079 + RSINE1 SINE B4 148 164 -1 5 1240 183 146 0 0 chrX 85964218 85964259 -80686037 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1240 180 0 0 0 chrX 85964280 85964300 -80685996 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 5 1240 246 283 0 0 chrX 85964348 85964401 -80685895 + polypyrimidine Low_complexity Low_complexity 3 55 0 5 1240 485 167 32 0 chrX 85964406 85964532 -80685764 + C-rich Low_complexity Low_complexity 1 130 0 5 1240 1024 98 14 0 chrX 85964663 85964806 -80685490 - B1_Mus1 SINE Alu -3 145 1 5 1240 1999 127 33 41 chrX 85966168 85966530 -80683766 - Lx LINE L1 -24 6630 6272 5 1240 24 32 0 0 chrX 85966800 85966831 -80683465 + AT_rich Low_complexity Low_complexity 1 31 0 5 1240 322 347 30 46 chrX 85967014 85967277 -80683019 - L1M5 LINE L1 -416 5824 5566 5 1240 2976 137 25 2 chrX 85967280 85967764 -80682532 - L1_Mm LINE L1 -715 5168 4674 5 1240 1928 128 23 52 chrX 85967764 85968111 -80682185 - L1Md_F2 LINE L1 -2 6580 6244 5 1240 33795 84 5 4 chrX 85968111 85973243 -80677053 - L1Md_F2 LINE L1 -68 5815 685 5 1240 1303 234 42 65 chrX 85973236 85974040 -80676256 - L1_Mur3 LINE L1 -4261 1619 904 5 1240 921 66 0 0 chrX 85974692 85974813 -80675483 - B1_Mus1 SINE Alu -27 121 1 5 1240 292 240 0 16 chrX 85974705 85974828 -80675468 - ORR1B1-int LTR MaLR -755 754 634 5 1240 21 0 0 0 chrX 85975633 85975654 -80674642 + AT_rich Low_complexity Low_complexity 1 21 0 5 1240 250 274 0 0 chrX 85977504 85977577 -80672719 + (ATG)n Simple_repeat Simple_repeat 3 75 0 5 1240 557 360 34 45 chrX 85978365 85978630 -80671666 - MTEb LTR MaLR -20 359 98 5 1240 540 298 134 5 chrX 85978690 85978899 -80671397 - MTE-int LTR MaLR -5 1575 1340 5 1240 214 317 63 55 chrX 85978960 85979087 -80671209 + B3 SINE B2 76 203 -13 5 1240 186 43 0 0 chrX 85979104 85979127 -80671169 + (CATATA)n Simple_repeat Simple_repeat 2 24 0 5 1240 291 345 34 54 chrX 85979137 85979284 -80671012 - ORR1E LTR MaLR -59 300 157 5 1240 312 83 0 0 chrX 85979302 85979350 -80670946 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 1240 708 311 5 21 chrX 85979350 85979544 -80670752 - ORR1E LTR MaLR -168 191 1 5 1240 1389 211 63 0 chrX 85979587 85979857 -80670439 - RMER15 LTR ERVL 0 575 289 5 1240 31 0 0 0 chrX 85979871 85979902 -80670394 + AT_rich Low_complexity Low_complexity 1 31 0 5 1240 23 33 0 0 chrX 85980067 85980097 -80670199 + AT_rich Low_complexity Low_complexity 1 30 0 6 1240 431 240 0 10 chrX 85980150 85980247 -80670049 - RMER15 LTR ERVL -343 232 137 5 1240 21 0 0 0 chrX 85980248 85980269 -80670027 + AT_rich Low_complexity Low_complexity 1 21 0 6 1240 10605 127 43 31 chrX 85980275 85981593 -80668703 + RLTR22_Mur LTR ERVK 1 1320 -528 6 1240 387 0 0 0 chrX 85981593 85981636 -80668660 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1240 10605 127 43 31 chrX 85981636 85982142 -80668154 + RLTR22_Mur LTR ERVK 1321 1847 -1 6 1240 685 335 8 8 chrX 85982157 85982392 -80667904 - Lx6 LINE L1 -46 7414 7180 6 1240 531 291 16 37 chrX 85982431 85982620 -80667676 - RMER1C Other Other -596 746 562 6 19 3130 265 15 36 chrX 85982640 85983504 -80666792 + RMER1C Other Other 493 1338 -4 6 1241 444 297 105 34 chrX 85983502 85983743 -80666553 - Lx6 LINE L1 -269 7191 6987 6 1241 313 320 24 8 chrX 85983736 85983859 -80666437 - Lx6 LINE L1 -620 6840 6716 6 1241 2778 220 21 57 chrX 85983861 85984613 -80665683 - L1_Mur3 LINE L1 -37 5840 5116 6 1241 3215 214 17 7 chrX 85984613 85985311 -80664985 - Lx LINE L1 0 6654 5950 6 1241 15105 62 7 2 chrX 85985311 85987973 -80662323 - L1Md_F3 LINE L1 -6 6578 3906 6 1241 9719 81 6 15 chrX 85987941 85989965 -80660331 - L1Md_F3 LINE L1 0 6582 4576 6 1241 2084 185 1 0 chrX 85989966 85990438 -80659858 - Lx LINE L1 -1044 5953 5481 6 1241 9206 186 34 11 chrX 85990439 85991673 -80658623 + L1_Mur2 LINE L1 3342 4624 -1253 6 1241 375 23 0 0 chrX 85991673 85991717 -80658579 + (CAA)n Simple_repeat Simple_repeat 2 45 0 6 1241 9206 186 34 11 chrX 85991717 85992465 -80657831 + L1_Mur2 LINE L1 4625 5368 -509 6 1241 2827 110 2 0 chrX 85992463 85992864 -80657432 - L1_Mus2 LINE L1 -192 6374 5973 6 1241 675 126 0 0 chrX 85992862 85992965 -80657331 + L1_Mm LINE L1 5365 5467 -416 6 1241 6190 238 25 19 chrX 85992963 85994747 -80655549 - L1_Mur3 LINE L1 -766 5114 3321 6 1241 2108 207 49 2 chrX 85995151 85995557 -80654739 - Lx4A LINE L1 -61 6997 6573 6 1241 1221 86 11 17 chrX 85995559 85995761 -80654535 - RMER17D LTR ERVK -577 174 1 6 1241 219 36 0 0 chrX 85995809 85995837 -80654459 + (GA)n Simple_repeat Simple_repeat 1 28 0 6 1241 23 33 0 0 chrX 85996148 85996178 -80654118 + AT_rich Low_complexity Low_complexity 1 30 0 6 1241 22 0 0 0 chrX 85996742 85996764 -80653532 + AT_rich Low_complexity Low_complexity 1 22 0 6 1241 682 374 41 39 chrX 85996771 85997283 -80653013 + Lx8 LINE L1 6797 7309 -164 6 1241 365 291 12 0 chrX 85999048 85999134 -80651162 + RSINE1 SINE B4 20 106 -59 6 1241 346 320 7 52 chrX 85999135 85999270 -80651026 + RSINE1 SINE B4 37 165 0 6 1241 318 317 48 24 chrX 85999819 85999987 -80650309 - RLTR15 LTR ERVK -9 350 179 6 1241 414 0 0 0 chrX 86000425 86000471 -80649825 + (TTA)n Simple_repeat Simple_repeat 2 47 0 1 1241 450 75 0 48 chrX 86002254 86002338 -80647958 + L1_Mus4 LINE L1 6557 6636 0 2 1241 291 215 31 0 chrX 86002348 86002413 -80647883 + B3A SINE B2 1 67 -131 3 1241 398 123 0 0 chrX 86002901 86002966 -80647330 - L1_Mus3 LINE L1 -258 6380 6316 4 1241 1327 111 10 10 chrX 86002964 86003164 -80647132 + L1_Mus3 LINE L1 6395 6594 -44 4 1241 302 410 59 46 chrX 86003164 86003471 -80646825 + MLT1J-int LTR MaLR 873 1183 -204 5 1241 915 10 0 0 chrX 86003852 86003956 -80646340 + (TTC)n Simple_repeat Simple_repeat 2 105 0 6 1241 996 331 72 64 chrX 86004072 86004763 -80645533 - Lx7 LINE L1 -365 7331 6635 7 1241 240 35 0 0 chrX 86004781 86004810 -80645486 + (T)n Simple_repeat Simple_repeat 1 29 0 8 1241 240 160 60 0 chrX 86004847 86004897 -80645399 - MIR SINE MIR -71 191 139 9 1241 180 0 0 0 chrX 86004988 86005008 -80645288 + (CACCC)n Simple_repeat Simple_repeat 1 20 0 1 1241 369 0 0 0 chrX 86005861 86005902 -80644394 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1 1241 315 0 0 0 chrX 86006447 86006482 -80643814 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1 1241 34030 72 2 2 chrX 86006810 86013061 -80637235 - L1Md_F2 LINE L1 0 6582 398 1 1241 189 0 0 0 chrX 86013090 86013111 -80637185 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 1241 534 349 27 101 chrX 86013178 86013366 -80636930 - ORR1E LTR MaLR -171 203 30 1 1241 189 0 0 0 chrX 86013423 86013444 -80636852 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1241 22 56 0 0 chrX 86013520 86013556 -80636740 + AT_rich Low_complexity Low_complexity 1 36 0 1 1241 25 0 0 0 chrX 86013613 86013638 -80636658 + AT_rich Low_complexity Low_complexity 1 25 0 1 1241 737 255 14 29 chrX 86014366 86014576 -80635720 + B3 SINE B2 1 207 -9 1 1241 691 216 5 70 chrX 86014615 86014814 -80635482 + B2_Mm2 SINE B2 2 187 -8 2 1241 514 333 29 58 chrX 86015723 86015997 -80634299 + MLT1D LTR MaLR 240 505 0 2 1241 745 178 62 17 chrX 86016783 86016960 -80633336 + B2_Mm2 SINE B2 11 195 0 2 1241 252 206 53 24 chrX 86017804 86017973 -80632323 + (TA)n Simple_repeat Simple_repeat 2 175 0 2 1241 5421 167 22 12 chrX 86018075 86019188 -80631108 - L1VL4 LINE L1 -1455 2104 981 2 1241 761 112 24 0 chrX 86019188 86019313 -80630983 + (TTTTC)n Simple_repeat Simple_repeat 4 131 0 2 1241 477 148 0 0 chrX 86019303 86019384 -80630912 + (TCCC)n Simple_repeat Simple_repeat 4 84 0 2 1241 315 0 0 0 chrX 86019384 86019419 -80630877 + (TTTC)n Simple_repeat Simple_repeat 1 35 0 2 1241 5152 173 24 1 chrX 86019419 86020362 -80629934 - Lx2A1 LINE L1 0 7008 6044 2 1241 1305 144 5 5 chrX 86020363 86020580 -80629716 + Lx2A1 LINE L1 5818 6034 -974 2 1241 2458 167 48 15 chrX 86020577 86021110 -80629186 - L1VL4 LINE L1 -2546 1013 465 2 1241 3745 192 18 34 chrX 86021318 86022192 -80628104 + MusHAL1 LINE L1 1209 2068 -644 2 1241 3227 74 0 0 chrX 86022195 86022626 -80627670 - L1_Mus2 LINE L1 -486 6080 5650 3 1241 1459 73 0 5 chrX 86022618 86022824 -80627472 - L1_Mus2 LINE L1 -412 5471 5267 3 1241 3397 101 2 0 chrX 86022824 86023298 -80626998 + L1_Mus2 LINE L1 6092 6566 0 3 1241 12191 189 35 14 chrX 86023314 86023363 -80626933 + L1_Mur2 LINE L1 3244 3325 -2552 3 1241 252 0 0 0 chrX 86023363 86023391 -80626905 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 1241 12191 189 35 14 chrX 86023391 86025881 -80624415 + L1_Mur2 LINE L1 3326 5836 -41 3 1241 263 280 17 0 chrX 86026077 86026149 -80624147 + MTD LTR MaLR 256 358 -61 3 1241 4847 133 7 45 chrX 86026149 86027480 -80622816 + L1VL1 LINE L1 228 1502 -2196 3 1241 524 275 98 21 chrX 86027492 86027685 -80622611 + L1VL1 LINE L1 84 291 -6131 3 1241 361 287 53 37 chrX 86027665 86027851 -80622445 + L1Md_F LINE L1 578 710 -5809 3 1241 1578 199 26 11 chrX 86027855 86028068 -80622228 + L1Md_F LINE L1 628 839 -5680 3 1241 1351 101 0 60 chrX 86028068 86028300 -80621996 + L1Md_F2 LINE L1 6365 6582 0 3 1241 1578 199 26 11 chrX 86028300 86028436 -80621860 + L1Md_F LINE L1 840 981 -5538 3 1241 2537 69 17 3 chrX 86028445 86028796 -80621500 - L1_Mus1 LINE L1 0 6567 6212 3 1241 3506 104 84 11 chrX 86028791 86029336 -80620960 + L1_Mus1 LINE L1 5983 6567 0 4 1241 549 150 0 0 chrX 86029336 86029436 -80620860 + (GA)n Simple_repeat Simple_repeat 1 100 0 4 1241 2529 159 59 8 chrX 86029437 86029932 -80620364 + Lx2B LINE L1 5827 6346 -654 4 1241 291 54 0 0 chrX 86029936 86029973 -80620323 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 4 1241 2693 129 17 2 chrX 86029973 86030385 -80619911 - Lx3_Mus LINE L1 -24 6985 6568 4 1241 1586 103 25 17 chrX 86030378 86030614 -80619682 + Lx2B LINE L1 6344 6581 -419 4 1241 349 173 0 13 chrX 86030614 86030690 -80619606 + Lx2B LINE L1 6915 6989 -11 4 1241 331 294 169 36 chrX 86031194 86031360 -80618936 - MER77 LTR ERVL -13 594 407 4 1241 1529 81 34 0 chrX 86031452 86031661 -80618635 + L1Md_F2 LINE L1 6348 6563 -19 4 1241 227 357 42 51 chrX 86032039 86032157 -80618139 + RLTR20D LTR ERVK 60 176 -392 4 1241 228 317 19 47 chrX 86032252 86032358 -80617938 + RLTR11A LTR ERVK 390 492 -36 4 1241 182 62 0 30 chrX 86032686 86032719 -80617577 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 4 1241 863 108 14 0 chrX 86032778 86032917 -80617379 + L1_Mus2 LINE L1 6426 6566 0 5 1241 243 167 42 0 chrX 86032920 86032968 -80617328 + Lx7 LINE L1 6858 6907 -789 5 1241 7141 52 1 3 chrX 86033158 86034053 -80616243 - L1Md_F3 LINE L1 -45 6539 5647 5 1241 2770 73 11 0 chrX 86034052 86034421 -80615875 + L1Md_F3 LINE L1 5274 5646 -237 5 1241 914 241 67 16 chrX 86034953 86035206 -80615090 + L1_Mur3 LINE L1 63 328 -7400 5 1241 411 21 0 0 chrX 86035478 86035526 -80614770 + L1Md_F2 LINE L1 4702 4749 -1134 5 1241 2595 37 0 21 chrX 86035531 86035861 -80614435 - IAPEY2_LTR LTR ERVK -3 354 32 5 1241 4099 83 2 0 chrX 86035864 86036419 -80613877 + L1Md_F2 LINE L1 4737 5292 -591 5 1241 7448 69 11 2 chrX 86036421 86037397 -80612899 + L1Md_F2 LINE L1 5597 6581 -1 5 1241 412 289 22 81 chrX 86037795 86038028 -80612268 - RLTR12B LTR ERVK -25 503 221 5 1241 709 253 26 50 chrX 86038084 86038387 -80611909 - RLTR11B LTR ERVK -151 302 7 5 1241 2119 255 62 98 chrX 86038394 86039232 -80611064 + L1_Mur3 LINE L1 425 1232 -6496 5 1241 530 228 67 4 chrX 86039206 86039466 -80610830 + L1_Mur3 LINE L1 1087 1363 -4517 5 1241 258 211 0 19 chrX 86040080 86040133 -80610163 + ID2 SINE ID 2 53 -30 5 1241 201 313 0 0 chrX 86041343 86041409 -80608887 + MIRc SINE MIR 111 179 -89 5 1241 444 164 88 35 chrX 86041862 86041976 -80608320 + Lx6 LINE L1 3427 3546 -2334 6 1241 608 175 55 43 chrX 86041977 86042144 -80608152 + RMER19B LTR ERVK 1 157 -580 6 1241 1372 204 45 55 chrX 86042144 86042687 -80607609 + RMER19B LTR ERVK 269 896 -6 6 1241 5365 201 47 123 chrX 86042695 86042971 -80607325 + Lx6 LINE L1 3640 3934 -1946 6 1241 471 266 64 110 chrX 86042971 86042988 -80607308 + B4 SINE B4 78 153 -139 6 1241 748 210 14 7 chrX 86042988 86043127 -80607169 + B1_Mur2 SINE Alu 9 148 -1 6 1241 471 266 64 110 chrX 86043127 86043144 -80607152 + B4 SINE B4 154 242 -50 6 1241 5365 201 47 123 chrX 86043144 86043636 -80606660 + Lx6 LINE L1 3935 4462 -1418 6 1241 330 26 0 0 chrX 86043636 86043675 -80606621 + (TA)n Simple_repeat Simple_repeat 2 40 0 6 1241 5365 201 47 123 chrX 86043675 86043726 -80606570 + Lx6 LINE L1 4463 4517 -1363 6 1241 234 0 0 0 chrX 86043726 86043752 -80606544 + (TAA)n Simple_repeat Simple_repeat 1 26 0 6 1241 5365 201 47 123 chrX 86043752 86043858 -80606438 + Lx6 LINE L1 4518 4622 -1258 6 1241 1080 124 0 0 chrX 86043858 86044036 -80606260 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 6 1241 5365 201 47 123 chrX 86044036 86044703 -80605593 + Lx6 LINE L1 4623 5272 -608 6 1241 1488 309 31 27 chrX 86044759 86045410 -80604886 + Lx5 LINE L1 6462 7032 -18 6 1241 2484 232 24 40 chrX 86045436 86046425 -80603871 + Lx6 LINE L1 5262 6247 -1213 6 1241 1593 224 68 20 chrX 86046478 86046878 -80603418 + Lx6 LINE L1 6476 6894 -566 6 1241 756 119 0 0 chrX 86046881 86046999 -80603297 + (GGGAGA)n Simple_repeat Simple_repeat 1 118 0 6 1241 1628 269 91 28 chrX 86047005 86047502 -80602794 + Lx6 LINE L1 6914 7441 -19 6 1241 7292 97 27 5 chrX 86047494 86048519 -80601777 - L1_Mus4 LINE L1 -2 6634 5587 6 1241 837 79 0 0 chrX 86049517 86049631 -80600665 + (TTCC)n Simple_repeat Simple_repeat 3 116 0 7 1241 611 112 10 0 chrX 86049640 86049738 -80600558 + L1_Mm LINE L1 3908 4006 -1877 7 1241 460 293 55 0 chrX 86049791 86049972 -80600324 - L1MA6 LINE L1 -317 5983 5793 7 1241 3754 230 58 10 chrX 86050004 86050826 -80599470 - Lx5 LINE L1 0 7050 6189 7 1241 593 173 258 5 chrX 86050844 86051030 -80599266 + L1_Mur2 LINE L1 5103 5335 -542 7 1241 549 327 136 12 chrX 86051037 86051294 -80599002 + Lx8 LINE L1 7049 7337 -136 7 1241 21 0 0 0 chrX 86051388 86051409 -80598887 + AT_rich Low_complexity Low_complexity 1 21 0 7 1241 3071 199 46 28 chrX 86051412 86052202 -80598094 - RLTR13D3 LTR ERVK 0 1114 1 7 1241 1126 82 7 0 chrX 86053025 86053172 -80597124 + B1_Mus1 SINE Alu 1 148 0 7 1241 245 20 80 20 chrX 86053184 86053234 -80597062 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 7 1241 495 344 0 11 chrX 86053254 86053439 -80596857 + B3A SINE B2 1 183 -15 8 1241 486 331 49 23 chrX 86054065 86054331 -80595965 + B4A SINE B4 2 274 -18 8 1241 212 171 0 24 chrX 86054393 86054435 -80595861 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 1241 21 36 0 0 chrX 86055185 86055213 -80595083 + AT_rich Low_complexity Low_complexity 1 28 0 8 1241 234 230 22 73 chrX 86055312 86055490 -80594806 + (TATAA)n Simple_repeat Simple_repeat 1 169 0 8 1241 21 0 0 0 chrX 86055533 86055554 -80594742 + AT_rich Low_complexity Low_complexity 1 21 0 8 1241 222 176 0 0 chrX 86056792 86056843 -80593453 + (TAA)n Simple_repeat Simple_repeat 1 51 0 8 1241 1000 158 0 12 chrX 86057141 86057307 -80592989 - B2_Mm2 SINE B2 -31 164 1 8 1241 405 0 0 0 chrX 86057373 86057418 -80592878 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 1241 405 0 0 0 chrX 86057418 86057462 -80592834 + (GA)n Simple_repeat Simple_repeat 1 45 0 8 1241 18744 124 7 6 chrX 86057624 86061347 -80588949 + L1_Mus2 LINE L1 2842 6566 0 9 1241 679 251 59 51 chrX 86062285 86062641 -80587655 - RLTR10D LTR ERVK 0 359 1 9 1241 470 309 18 29 chrX 86063452 86063622 -80586674 + MER5B DNA MER1_type 1 168 -10 9 1241 436 346 115 0 chrX 86064363 86064519 -80585777 + ID_B1 SINE B4 42 215 -9 9 1241 23 0 0 0 chrX 86065166 86065189 -80585107 + AT_rich Low_complexity Low_complexity 1 23 0 9 1241 3505 94 4 1 chrX 86065583 86066180 -80584116 + L1Md_F LINE L1 631 1202 -5414 9 1241 619 141 0 0 chrX 86066176 86066268 -80584028 + L1Md_F2 LINE L1 5494 5585 -298 9 1241 7815 60 6 0 chrX 86066269 86067259 -80583037 + L1Md_F2 LINE L1 5587 6582 0 9 1241 240 59 0 0 chrX 86067310 86067344 -80582952 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 9 1241 445 184 27 9 chrX 86068431 86068541 -80581755 - Lx7 LINE L1 0 7696 7585 9 1241 674 197 24 0 chrX 86068571 86068698 -80581598 - Lx4B LINE L1 -422 6636 6507 9 1241 1938 142 6 31 chrX 86068698 86069025 -80581271 + ORR1A2 LTR MaLR 1 319 -8 1 1241 571 106 0 66 chrX 86069045 86069136 -80581160 - Lx4B LINE L1 -575 6483 6399 9 1241 1908 185 42 32 chrX 86069135 86069537 -80580759 + Lx4B LINE L1 6648 7053 -5 1 1241 273 168 74 25 chrX 86069566 86069688 -80580608 - Lx7 LINE L1 -126 7570 7443 9 1241 2218 245 42 51 chrX 86069693 86070276 -80580020 + Lx7 LINE L1 6811 7388 -308 1 1241 231 88 0 0 chrX 86070276 86070310 -80579986 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1 1241 2218 245 42 51 chrX 86070310 86070375 -80579921 + Lx7 LINE L1 7389 7453 -243 1 1241 26 82 0 0 chrX 86070518 86070579 -80579717 + AT_rich Low_complexity Low_complexity 1 61 0 1 1241 352 244 30 92 chrX 86071021 86071152 -80579144 + B1_Mur1 SINE Alu 26 148 -1 1 1241 4433 58 28 0 chrX 86072502 86073069 -80577227 + L1_Mus1 LINE L1 5984 6566 -1 1 1241 243 321 0 12 chrX 86073320 86073402 -80576894 + ID4_ SINE ID 2 82 -1 1 1241 479 296 66 29 chrX 86074067 86074203 -80576093 + RSINE1 SINE B4 4 144 -21 1 1241 459 118 0 0 chrX 86074212 86074288 -80576008 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 1241 198 0 0 0 chrX 86074292 86074314 -80575982 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 1 1241 5548 119 36 28 chrX 86074364 86075261 -80575035 - L1_Mus3 LINE L1 -5 6633 5730 1 1241 17914 155 5 9 chrX 86075260 86078497 -80571799 - L1_Mm LINE L1 -1265 4618 1397 1 1241 3150 121 6 4 chrX 86078497 86078979 -80571317 + RLTR1C LTR ERV1 1 483 -20 1 1241 856 171 27 91 chrX 86079000 86079219 -80571077 + MMERGLN-int LTR ERV1 1 205 -3094 1 1241 1034 246 8 27 chrX 86079205 86079464 -80570832 + MMERGLN-int LTR ERV1 145 398 -7158 1 1241 886 105 110 55 chrX 86079444 86079626 -80570670 + MMVL30-int LTR ERV1 266 457 -2842 1 1241 1603 42 0 0 chrX 86079627 86079819 -80570477 + B2_Mm1t SINE B2 2 193 0 1 1241 461 232 16 70 chrX 86080205 86080390 -80569906 + MMVL30-int LTR ERV1 656 830 -2469 1 1241 2201 120 32 85 chrX 86080452 86080852 -80569444 + MMVL30-int LTR ERV1 1075 1453 -2245 1 1241 539 96 0 78 chrX 86080949 86081051 -80569245 + MMVL30-int LTR ERV1 949 1042 -2257 1 1241 604 157 43 65 chrX 86081062 86081246 -80569050 + MMVL30-int LTR ERV1 1020 1199 -2100 1 1241 519 209 0 0 chrX 86081331 86081446 -80568850 + (CA)n Simple_repeat Simple_repeat 1 115 0 1 1241 2559 198 65 45 chrX 86081446 86082153 -80568143 + MMVL30-int LTR ERV1 1816 2654 -2409 1 1241 4792 153 37 70 chrX 86082120 86083611 -80566685 + MMVL30-int LTR ERV1 2689 5384 -2394 1 1241 3034 145 9 6 chrX 86083619 86084118 -80566178 + RLTR1C LTR ERV1 4 519 0 1 1241 4476 166 41 20 chrX 86084124 86085085 -80565211 - L1VL1 LINE L1 -2520 1178 194 1 1241 22 0 0 0 chrX 86085189 86085211 -80565085 + AT_rich Low_complexity Low_complexity 1 22 0 1 1241 232 192 50 0 chrX 86085404 86085503 -80564793 + (TA)n Simple_repeat Simple_repeat 1 104 0 1 1241 36 53 0 0 chrX 86085503 86085560 -80564736 + AT_rich Low_complexity Low_complexity 1 57 0 1 1241 261 83 0 0 chrX 86085561 86085597 -80564699 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1241 3441 177 14 9 chrX 86085603 86086297 -80563999 - L1_Mur1 LINE L1 -2039 3847 3150 1 1241 3628 155 5 10 chrX 86086297 86086904 -80563392 + Lx2 LINE L1 6393 6996 -1 1 1241 24 0 0 0 chrX 86086986 86087010 -80563286 + AT_rich Low_complexity Low_complexity 1 24 0 1 1241 1444 251 27 11 chrX 86087011 86087381 -80562915 - Lx2B LINE L1 -36 6964 6589 1 1241 631 189 0 26 chrX 86087370 86087484 -80562812 + Lx2B LINE L1 6466 6576 -424 1 1241 1025 314 73 70 chrX 86087513 86088139 -80562157 - Lx8 LINE L1 -6 7467 6840 1 1241 624 337 89 39 chrX 86088163 86088747 -80561549 + L1MD LINE L1 4631 5243 -903 1 1241 338 426 16 56 chrX 86088761 86089064 -80561232 + B4A SINE B4 2 292 0 1 1241 605 189 0 0 chrX 86089223 86089318 -80560978 - Lx5 LINE L1 -779 6271 6177 1 1241 331 196 61 10 chrX 86089766 86089864 -80560432 - Lx6 LINE L1 -1331 6129 6027 1 1241 384 128 154 0 chrX 86089894 86089972 -80560324 - Lx2B LINE L1 -1111 5889 5800 1 1241 1976 281 11 0 chrX 86089966 86090439 -80559857 + Lx5 LINE L1 6279 6756 -294 1 1241 4756 78 5 6 chrX 86090445 86091091 -80559205 - L1Md_F2 LINE L1 0 6582 5938 1 1241 1104 88 0 0 chrX 86091091 86091239 -80559057 + L1Md_F2 LINE L1 5797 5944 -638 1 1241 915 281 54 16 chrX 86091250 86091492 -80558804 + Lx5 LINE L1 6761 7011 -39 1 1241 885 123 0 0 chrX 86091502 86091640 -80558656 + (GGAA)n Simple_repeat Simple_repeat 4 141 0 1 1241 2616 226 11 8 chrX 86091861 86092392 -80557904 + RMER15 LTR ERVL 1 533 -42 1 1241 420 20 0 0 chrX 86092396 86092445 -80557851 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1241 241 266 142 35 chrX 86092617 86092730 -80557566 + L1MD2 LINE L1 6036 6160 -199 1 1241 24 53 0 0 chrX 86093227 86093265 -80557031 + AT_rich Low_complexity Low_complexity 1 38 0 1 1241 3701 139 0 0 chrX 86093318 86093877 -80556419 - L1_Mus4 LINE L1 -119 6517 5959 1 1241 432 0 0 0 chrX 86093976 86094024 -80556272 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1241 331 303 56 50 chrX 86094197 86094357 -80555939 - MER67D LTR ERV1 -342 172 12 1 1241 28 0 0 0 chrX 86094458 86094486 -80555810 + AT_rich Low_complexity Low_complexity 1 28 0 1 1241 297 0 0 0 chrX 86095828 86095861 -80554435 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 1 1241 1532 105 13 0 chrX 86095956 86096208 -80554088 + L1_Mus3 LINE L1 6398 6638 0 1 1241 1365 195 4 19 chrX 86096421 86096687 -80553609 - Lx LINE L1 -34 6620 6359 1 1241 1069 234 71 56 chrX 86097427 86097820 -80552476 - Lx7 LINE L1 0 7696 7298 1 1241 498 264 32 32 chrX 86097812 86098000 -80552296 - Lx7 LINE L1 -549 7147 6960 1 1241 709 250 13 0 chrX 86098018 86098174 -80552122 - B3 SINE B2 0 216 59 1 1241 324 102 0 0 chrX 86098177 86098226 -80552070 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1241 355 284 107 41 chrX 86098240 86098361 -80551935 - B3A SINE B2 -57 141 13 1 1241 911 119 0 0 chrX 86098610 86098744 -80551552 + B1_Mus1 SINE Alu 1 134 -14 1 1241 492 18 0 0 chrX 86098744 86098801 -80551495 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 1241 813 267 179 97 chrX 86099239 86099281 -80551015 - MT2A LTR ERVL 0 533 491 1 1241 300 27 0 0 chrX 86099281 86099318 -80550978 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1241 813 267 179 97 chrX 86099318 86099768 -80550528 - MT2A LTR ERVL -43 490 1 1 1241 1002 294 207 30 chrX 86100509 86100960 -80549336 - RMER15 LTR ERVL 0 575 45 1 1241 26 30 0 0 chrX 86101117 86101150 -80549146 + AT_rich Low_complexity Low_complexity 1 33 0 1 1241 556 26 0 38 chrX 86102110 86102189 -80548107 + L1Md_T LINE L1 6499 6574 -8 1 1241 29963 91 29 10 chrX 86102192 86105699 -80544597 + L1Md_F2 LINE L1 598 4214 -1669 1 1241 4751 57 7 3 chrX 86105699 86106302 -80543994 + L1Md_F3 LINE L1 5966 6570 -14 1 1241 29963 86 17 12 chrX 86106302 86107702 -80542594 + L1Md_F2 LINE L1 4215 5584 -299 1 1241 6606 99 28 8 chrX 86107704 86108670 -80541626 + L1Md_F2 LINE L1 5587 6571 -11 1 1241 21 36 0 0 chrX 86109051 86109079 -80541217 + AT_rich Low_complexity Low_complexity 1 28 0 1 1241 482 312 0 0 chrX 86110365 86110509 -80539787 - B1_Mur2 SINE Alu -2 147 4 1 1241 228 226 0 0 chrX 86110541 86110603 -80539693 + (TATATG)n Simple_repeat Simple_repeat 1 62 0 1 1241 4657 236 48 17 chrX 86110668 86111845 -80538451 - Lx3C LINE L1 -10 6966 5754 1 1241 797 262 34 51 chrX 86112078 86112457 -80537839 + L1VL4 LINE L1 706 1067 -5917 1 1241 558 159 44 0 chrX 86112457 86112570 -80537726 - RMER17C LTR ERVK 0 410 293 1 1241 605 158 0 131 chrX 86112571 86112739 -80537557 + MusHAL1 LINE L1 271 416 -2296 1 1241 5861 106 43 28 chrX 86112745 86113667 -80536629 + Lx3_Mus LINE L1 6074 7009 0 1 1241 341 58 19 0 chrX 86113678 86113730 -80536566 + (CAA)n Simple_repeat Simple_repeat 2 54 0 1 155 4324 186 7 6 chrX 86113730 86114587 -80535709 + L1VL4 LINE L1 2393 3250 -2636 1 1242 1077 96 7 0 chrX 86114649 86114795 -80535501 + B1_Mm SINE Alu 1 147 0 1 1242 242 70 70 0 chrX 86114795 86114838 -80535458 + (CAAAAA)n Simple_repeat Simple_repeat 6 51 0 1 1242 2349 244 42 7 chrX 86114925 86115544 -80534752 + L1_Mur3 LINE L1 531 1171 -6541 1 1242 340 272 0 0 chrX 86116123 86116215 -80534081 + Lx6 LINE L1 928 1019 -6709 1 1242 4238 154 7 17 chrX 86116213 86116958 -80533338 - Lx3B LINE L1 -79 5807 5071 1 1242 1839 143 32 20 chrX 86116946 86117289 -80533007 + Lx3B LINE L1 5796 6142 -831 1 1242 634 178 20 46 chrX 86117289 86117442 -80532854 + Lx3B LINE L1 6820 6968 -5 1 1242 26 30 0 0 chrX 86117451 86117484 -80532812 + AT_rich Low_complexity Low_complexity 1 33 0 1 1242 3378 202 34 8 chrX 86117484 86118424 -80531872 + Lx6 LINE L1 1001 1966 -3914 1 1242 4365 172 60 21 chrX 86118424 86119292 -80531004 - RLTR13D6 LTR ERVK 0 902 1 1 1242 4838 223 53 23 chrX 86119294 86119386 -80530910 + Lx6 LINE L1 1961 2051 -3826 1 1242 306 0 0 0 chrX 86119386 86119420 -80530876 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1242 4838 223 53 23 chrX 86119420 86120729 -80529567 + Lx6 LINE L1 2052 3405 -2472 1 1242 2378 210 63 21 chrX 86120725 86121541 -80528755 + Lx6 LINE L1 5288 6137 -1323 1 1242 3399 199 36 6 chrX 86121542 86121561 -80528735 - RLTR17 LTR ERVK 0 692 674 1 1242 315 0 0 0 chrX 86121561 86121596 -80528700 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1242 3399 199 36 6 chrX 86121596 86122248 -80528048 - RLTR17 LTR ERVK -19 673 2 1 1242 3853 230 19 52 chrX 86122248 86123235 -80527061 - RLTR10-int LTR ERVK 0 2842 1887 1 1242 1155 49 7 0 chrX 86123235 86123378 -80526918 - B1_Mus2 SINE Alu -2 145 2 1 1242 3853 230 19 52 chrX 86123378 86123604 -80526692 - RLTR10-int LTR ERVK -956 1886 1669 1 1242 403 171 0 14 chrX 86123610 86123681 -80526615 + URR1B DNA MER1_type 156 225 0 1 1242 322 300 167 12 chrX 86123790 86123952 -80526344 - ETnERV2-int LTR ERVK -981 6425 6239 1 1242 261 250 0 18 chrX 86124034 86124091 -80526205 - ETnERV2-int LTR ERVK -1195 6211 6156 1 1242 5471 131 74 33 chrX 86124151 86125184 -80525112 - RMER16-int LTR ERVK -1229 4177 3103 1 1242 4774 74 8 0 chrX 86125184 86125817 -80524479 + L1_Mus2 LINE L1 5600 6237 -329 1 1242 3245 36 3 0 chrX 86125817 86126206 -80524090 - RLTR10 LTR ERVK 0 390 1 1 1242 8749 21 0 1 chrX 86126208 86127204 -80523092 - RLTR10-int LTR ERVK -3 1984 990 1 1242 4689 141 22 21 chrX 86127286 86128498 -80521798 - RLTR10-int LTR ERVK -5987 1594 302 1 1242 484 195 36 72 chrX 86128498 86128636 -80521660 - RLTR10A LTR ERVK 0 411 279 1 1242 299 67 44 0 chrX 86128638 86128683 -80521613 - RLTR10-int LTR ERVK -6429 52 6 1 1242 2889 18 9 0 chrX 86128683 86129015 -80521281 - RLTR17 LTR ERVK -2 335 1 1 1242 2297 65 40 3 chrX 86129015 86129338 -80520958 + L1_Mus2 LINE L1 6232 6566 0 1 1242 2547 200 30 23 chrX 86129348 86129915 -80520381 - RMER16-int LTR ERVK -2291 3115 2545 1 1242 6896 117 14 11 chrX 86129918 86130818 -80519478 - L1_Mus3 LINE L1 0 6638 5735 1 1242 2915 41 91 0 chrX 86130818 86131181 -80519115 + MTA_Mm LTR MaLR 1 396 0 1 1242 6896 122 7 11 chrX 86131181 86131626 -80518670 - L1_Mus3 LINE L1 -149 5734 5288 1 1242 252 0 0 0 chrX 86131626 86131654 -80518642 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1242 39060 59 2 23 chrX 86131657 86138571 -80511725 - L1Md_T LINE L1 0 6582 98 1 1242 16793 138 3 12 chrX 86138562 86140286 -80510010 - L1_Mus3 LINE L1 -579 5304 3593 1 1242 3224 51 5 0 chrX 86140286 86140680 -80509616 - MTA_Mm LTR MaLR 0 396 1 1 1242 16793 138 3 12 chrX 86140680 86141759 -80508537 - L1_Mus3 LINE L1 -2291 3592 2525 1 1242 1980 241 58 40 chrX 86141762 86141961 -80508335 - ETnERV2-int LTR ERVK -4317 3089 2878 1 1242 324 0 0 0 chrX 86141961 86141997 -80508299 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1 1242 1980 241 58 40 chrX 86141997 86142468 -80507828 - ETnERV2-int LTR ERVK -4529 2877 2408 1 1242 266 204 55 18 chrX 86142462 86142517 -80507779 - ETnERV2-int LTR ERVK -5153 2253 2197 1 1242 383 313 24 18 chrX 86142494 86142660 -80507636 - ETnERV2-int LTR ERVK -1733 1581 1415 1 1242 212 31 62 0 chrX 86142752 86142784 -80507512 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 1 1242 814 186 18 6 chrX 86142789 86142957 -80507339 - ETnERV2-int LTR ERVK -5215 2191 2022 1 1242 360 0 0 0 chrX 86142957 86142997 -80507299 + (TTTTA)n Simple_repeat Simple_repeat 2 41 0 1 1242 4434 151 65 50 chrX 86143847 86143942 -80506354 - ETnERV2-int LTR ERVK -5371 2035 1937 1 1242 513 47 0 0 chrX 86143942 86144006 -80506290 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 1242 4434 151 65 50 chrX 86144006 86144167 -80506129 - ETnERV2-int LTR ERVK -5470 1936 1781 1 1242 513 47 0 0 chrX 86144167 86144231 -80506065 + (TG)n Simple_repeat Simple_repeat 2 65 0 1 1242 4434 151 65 50 chrX 86144231 86144935 -80505361 - ETnERV2-int LTR ERVK -5626 1780 1060 1 1242 263 130 0 18 chrX 86144974 86145029 -80505267 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 2 1242 1564 171 76 9 chrX 86145347 86145689 -80504607 - RLTR9A LTR ERVK -3 365 1 2 1242 21 0 0 0 chrX 86145881 86145902 -80504394 + AT_rich Low_complexity Low_complexity 1 21 0 2 1242 386 264 11 0 chrX 86147006 86147097 -80503199 - ID_B1 SINE B4 -3 221 130 2 1242 291 344 9 66 chrX 86147111 86147217 -80503079 + B3 SINE B2 87 186 -30 2 1242 266 284 94 10 chrX 86147564 86147756 -80502540 + L1M4c LINE L1 2273 2480 -4854 2 1242 347 327 11 57 chrX 86147909 86148084 -80502212 + L1M4c LINE L1 2665 2831 -4177 2 1242 202 245 41 0 chrX 86148468 86148517 -80501779 + CT-rich Low_complexity Low_complexity 1 51 0 2 1242 1130 202 39 27 chrX 86149146 86149406 -80500890 - RMER6C LTR ERVK -3 687 425 2 1242 3818 168 48 2 chrX 86149407 86150051 -80500245 - Lx2B LINE L1 -79 6921 6248 2 1242 423 297 65 37 chrX 86150055 86150272 -80500024 - L1MDb LINE L1 -5241 1168 946 2 1242 306 125 0 0 chrX 86152250 86152298 -80497998 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1242 309 135 0 0 chrX 86152322 86152374 -80497922 + (GGGAGA)n Simple_repeat Simple_repeat 4 55 0 2 1242 344 330 70 0 chrX 86152840 86152955 -80497341 - B4 SINE B4 -169 123 1 2 1242 2769 143 11 2 chrX 86153253 86153266 -80497030 - L1_Mus4 LINE L1 -1 6635 6623 2 1242 525 32 0 0 chrX 86153266 86153329 -80496967 + (TTA)n Simple_repeat Simple_repeat 1 63 0 2 1242 2769 143 11 2 chrX 86153329 86153784 -80496512 - L1_Mus4 LINE L1 -14 6622 6164 2 1242 1829 177 3 6 chrX 86153784 86154131 -80496165 + L1_Mur2 LINE L1 4264 4609 -1268 2 1242 570 29 0 0 chrX 86154150 86154218 -80496078 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 1242 970 104 0 27 chrX 86154218 86154366 -80495930 - B2_Mm2 SINE B2 -50 145 2 2 1242 248 143 0 0 chrX 86154366 86154408 -80495888 + L1_Mm LINE L1 4599 4640 -1243 2 1242 209 33 33 0 chrX 86154408 86154438 -80495858 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1242 472 375 34 0 chrX 86154664 86154872 -80495424 - ID_B1 SINE B4 -5 219 5 2 1242 1583 63 0 0 chrX 86156066 86156272 -80494024 + L1Md_F2 LINE L1 6363 6568 -14 2 1242 4027 127 35 33 chrX 86156365 86157059 -80493237 - Lx3A LINE L1 -168 5718 5024 2 1242 6253 164 53 10 chrX 86157053 86158250 -80492046 + Lx3A LINE L1 5716 6963 -18 2 1242 582 15 0 0 chrX 86158262 86158329 -80491967 + (GAAA)n Simple_repeat Simple_repeat 4 70 0 2 1242 20686 146 14 9 chrX 86158532 86158589 -80491707 + L1_Mus3 LINE L1 2293 2349 -3534 2 1242 192 40 0 0 chrX 86158589 86158614 -80491682 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 1242 20686 137 13 9 chrX 86158614 86162875 -80487421 + L1_Mus3 LINE L1 2350 6630 -8 2 1242 32 43 0 0 chrX 86162882 86162928 -80487368 + AT_rich Low_complexity Low_complexity 1 46 0 2 1242 333 287 31 72 chrX 86162931 86163096 -80487200 + B3 SINE B2 27 216 0 2 1242 896 302 54 21 chrX 86164033 86164365 -80485931 - MER2 DNA MER2_type -1 344 2 2 1242 261 0 0 0 chrX 86164516 86164545 -80485751 + (A)n Simple_repeat Simple_repeat 1 29 0 2 1242 22 0 0 0 chrX 86164931 86164953 -80485343 + AT_rich Low_complexity Low_complexity 1 22 0 2 1242 231 22 0 98 chrX 86165071 86165122 -80485174 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 2 1242 1149 62 0 0 chrX 86165122 86165268 -80485028 - B1_Mm SINE Alu 0 147 2 2 1242 197 178 0 22 chrX 86165954 86166000 -80484296 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 1242 264 77 0 0 chrX 86166087 86166126 -80484170 + (A)n Simple_repeat Simple_repeat 1 39 0 2 1242 5132 36 11 0 chrX 86166178 86166795 -80483501 - L1Md_F3 LINE L1 -2 6582 5959 2 1242 1356 363 41 19 chrX 86167138 86167890 -80482406 - Lx8 LINE L1 -1 7472 6704 2 1242 286 345 43 56 chrX 86167915 86168148 -80482148 - Lx8 LINE L1 -1079 6394 6165 2 1242 28 29 0 0 chrX 86168153 86168188 -80482108 + AT_rich Low_complexity Low_complexity 1 35 0 2 1242 1135 226 65 48 chrX 86168320 86168447 -80481849 - ORR1C1 LTR MaLR 0 378 253 2 1242 1559 43 0 11 chrX 86168447 86168636 -80481660 - B2_Mm1t SINE B2 -5 188 2 2 1242 1135 226 65 48 chrX 86168636 86168880 -80481416 - ORR1C1 LTR MaLR -126 252 2 2 1242 3921 30 19 0 chrX 86168906 86169372 -80480924 - L1_Mm LINE L1 -28 5855 5381 2 1242 2390 31 3 3 chrX 86169372 86169664 -80480632 + L1Md_F3 LINE L1 6277 6568 -16 2 1242 819 123 12 6 chrX 86169746 86169910 -80480386 + (TC)n Simple_repeat Simple_repeat 2 166 0 2 1242 628 285 110 39 chrX 86169922 86170344 -80479952 - Lx8 LINE L1 -16 5831 5339 2 1242 269 235 29 48 chrX 86170715 86170818 -80479478 + MER5C DNA MER1_type 113 213 -100 2 1242 403 283 9 9 chrX 86171781 86171895 -80478401 + MER90 LTR ERV1 47 160 -415 2 1242 273 57 0 0 chrX 86172071 86172106 -80478190 + (TA)n Simple_repeat Simple_repeat 1 35 0 2 1242 468 35 0 0 chrX 86172106 86172164 -80478132 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1242 742 277 50 41 chrX 86173117 86173437 -80476859 - RLTR15 LTR ERVK -36 323 1 2 1242 1844 163 19 0 chrX 86173497 86173810 -80476486 + ORR1A2 LTR MaLR 1 319 -8 2 1242 8190 184 87 23 chrX 86173814 86175660 -80474636 + ORR1A2-int LTR MaLR 1 1963 0 2 1242 1755 173 22 3 chrX 86175660 86175973 -80474323 + ORR1A2 LTR MaLR 1 319 -8 2 1242 461 103 15 0 chrX 86175993 86176061 -80474235 - Lx4B LINE L1 -575 6483 6415 2 1242 1843 227 30 22 chrX 86176082 86176488 -80473808 + Lx4B LINE L1 6650 7058 0 2 1242 832 216 23 143 chrX 86176530 86176795 -80473501 - Lx5 LINE L1 -335 6723 6491 2 1242 1111 114 24 0 chrX 86176811 86176978 -80473318 - B2_Mm2 SINE B2 -22 173 3 2 1242 2143 228 74 13 chrX 86176978 86177521 -80472775 - Lx5 LINE L1 -584 6466 5891 2 1242 267 338 13 0 chrX 86177877 86177954 -80472342 - ID SINE ID -144 80 3 2 1242 423 224 0 0 chrX 86178641 86178717 -80471579 - B1_Mur1 SINE Alu -2 147 72 2 1242 566 290 190 38 chrX 86178924 86179275 -80471021 - MTD LTR MaLR 0 419 1 2 1242 1551 219 81 21 chrX 86179956 86180338 -80469958 - MTD LTR MaLR -2 417 13 2 1242 296 221 56 56 chrX 86180373 86180445 -80469851 + RSINE1 SINE B4 57 128 -37 2 1242 450 36 0 0 chrX 86180464 86180520 -80469776 + (TC)n Simple_repeat Simple_repeat 1 56 0 2 1242 411 21 0 0 chrX 86180520 86180567 -80469729 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1242 31 26 0 0 chrX 86180606 86180644 -80469652 + AT_rich Low_complexity Low_complexity 1 38 0 2 1242 936 105 0 0 chrX 86181084 86181236 -80469060 + (TTC)n Simple_repeat Simple_repeat 2 153 0 2 1242 877 126 7 7 chrX 86181237 86181373 -80468923 - B1_Mus1 SINE Alu -12 136 1 2 1242 2738 114 62 20 chrX 86181538 86181993 -80468303 + Lx LINE L1 6181 6654 0 2 1242 203 261 15 0 chrX 86182212 86182277 -80468019 + (TATATG)n Simple_repeat Simple_repeat 3 68 0 2 1242 311 395 74 54 chrX 86182712 86183119 -80467177 + LTR16A LTR ERVL 5 419 -32 2 1242 189 74 0 0 chrX 86183414 86183441 -80466855 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1242 224 188 0 14 chrX 86183759 86183829 -80466467 + (TGG)n Simple_repeat Simple_repeat 3 71 0 2 1242 402 21 0 0 chrX 86183841 86183888 -80466408 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1242 1514 239 60 3 chrX 86183966 86184301 -80465995 + Lx5 LINE L1 6686 7039 -11 2 1242 25 0 0 0 chrX 86185175 86185200 -80465096 + AT_rich Low_complexity Low_complexity 1 25 0 2 1242 717 157 0 0 chrX 86185801 86185935 -80464361 + (CA)n Simple_repeat Simple_repeat 1 134 0 2 1242 889 272 0 9 chrX 86185943 86186158 -80464138 - RMER1C Other Other -1100 242 30 2 1242 441 54 0 0 chrX 86186729 86186785 -80463511 + (TC)n Simple_repeat Simple_repeat 2 57 0 2 1242 324 0 0 0 chrX 86186919 86186955 -80463341 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1242 242 352 33 11 chrX 86187226 86187318 -80462978 - B1F2 SINE Alu -51 98 5 2 1242 1104 138 21 16 chrX 86187388 86187580 -80462716 + B2_Mm2 SINE B2 2 194 -1 2 1242 950 181 5 0 chrX 86188938 86189126 -80461170 - Lx2 LINE L1 -1 6996 6808 2 1242 711 203 29 63 chrX 86189149 86189373 -80460923 + Lx4B LINE L1 6747 7054 -4 2 1242 1243 276 111 8 chrX 86189997 86190366 -80459930 - Lx6 LINE L1 -34 7426 7020 2 1242 920 179 17 6 chrX 86190372 86190552 -80459744 - RLTR28 LTR ERVL -26 498 317 2 1242 1663 226 2 51 chrX 86190667 86191158 -80459138 - RLTR28 LTR ERVL 0 524 80 2 1242 25 0 0 0 chrX 86191356 86191381 -80458915 + AT_rich Low_complexity Low_complexity 1 25 0 2 1242 6306 162 45 22 chrX 86191381 86193546 -80456750 - L1_Mus3 LINE L1 0 6638 4427 2 1242 25247 133 22 14 chrX 86193541 86198028 -80452268 - L1Md_F2 LINE L1 -1 6581 2043 2 1242 186 43 0 0 chrX 86198028 86198051 -80452245 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1242 25247 182 20 58 chrX 86198051 86199634 -80450662 - L1Md_F2 LINE L1 -3841 2042 546 2 1242 265 183 33 0 chrX 86199701 86199761 -80450535 - L1MA9 LINE L1 -25 6287 6226 2 1242 4941 152 29 21 chrX 86199806 86200667 -80449629 - Lx LINE L1 -7 6647 5780 2 1242 6930 98 5 3 chrX 86200670 86201754 -80448542 - L1Md_F2 LINE L1 -14 6568 5486 2 1242 2301 99 116 0 chrX 86201754 86202107 -80448189 + L1Md_F2 LINE L1 6177 6570 -12 2 1242 5023 157 34 1 chrX 86202135 86202992 -80447304 - L1Md_F LINE L1 -5520 999 115 2 1242 1992 157 12 0 chrX 86202997 86203334 -80446962 - L1_Mm LINE L1 -90 5793 5453 2 1242 3389 116 9 0 chrX 86203334 86203867 -80446429 - L1M4c LINE L1 -994 3156 2619 2 1242 1488 115 0 13 chrX 86203868 86204105 -80446191 - L1Md_F2 LINE L1 0 6582 6349 2 1242 1702 151 14 4 chrX 86204105 86204384 -80445912 + L1Md_F LINE L1 261 542 -5977 2 1242 270 182 0 0 chrX 86204370 86204425 -80445871 + L1Md_F LINE L1 233 287 -6232 2 1242 581 133 25 2 chrX 86204423 86204534 -80445762 - L1M4c LINE L1 -3726 2650 2529 2 1242 26250 72 3 1 chrX 86205011 86208502 -80441794 + L1Md_F2 LINE L1 2088 5585 -298 2 1242 7674 65 2 1 chrX 86208503 86209496 -80440800 + L1Md_F2 LINE L1 5587 6580 -2 2 1242 207 0 0 0 chrX 86209518 86209541 -80440755 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1242 1276 170 3 1 chrX 86209541 86209770 -80440526 - L1M4c LINE L1 -1606 2544 2332 2 1242 23 0 0 0 chrX 86210599 86210622 -80439674 + AT_rich Low_complexity Low_complexity 1 23 0 2 1242 762 131 0 0 chrX 86211151 86211273 -80439023 + (TTC)n Simple_repeat Simple_repeat 2 123 0 2 1242 1134 158 15 0 chrX 86211279 86211475 -80438821 - L1_Mus3 LINE L1 -21 6617 6419 2 1242 358 296 200 19 chrX 86211655 86211920 -80438376 + L1M2 LINE L1 4537 4849 -1294 3 1242 283 255 0 31 chrX 86211968 86212065 -80438231 + L1M4 LINE L1 4980 5073 -1073 3 1242 3358 147 11 2 chrX 86212082 86212622 -80437674 - Lx LINE L1 -8 6646 6102 3 1242 268 247 95 28 chrX 86212899 86213078 -80437218 + L1M2 LINE L1 5328 5518 -773 3 1242 726 248 47 33 chrX 86213056 86213228 -80437068 - L1M2 LINE L1 -669 5628 5465 3 1242 2795 41 18 3 chrX 86213228 86213569 -80436727 + ORR1A1 LTR MaLR 1 346 0 3 1242 726 242 48 28 chrX 86213569 86213675 -80436621 - L1M2 LINE L1 -848 5464 5355 3 1242 21 36 0 0 chrX 86213772 86213800 -80436496 + AT_rich Low_complexity Low_complexity 1 28 0 3 1242 4015 193 37 8 chrX 86214339 86215222 -80435074 - L1_Mur2 LINE L1 -1252 4625 3717 3 1242 285 331 75 8 chrX 86215276 86215410 -80434886 + Lx3B LINE L1 2075 2217 -3663 3 1242 1776 196 21 0 chrX 86215414 86215745 -80434551 - RMER6D LTR ERVK -16 704 367 3 1242 237 65 0 0 chrX 86215774 86215805 -80434491 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1242 267 122 0 0 chrX 86215825 86215874 -80434422 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 1242 510 244 0 0 chrX 86215873 86216008 -80434288 + (TA)n Simple_repeat Simple_repeat 2 136 0 3 1242 1161 179 8 54 chrX 86216014 86216256 -80434040 - RMER6D LTR ERVK -383 337 107 3 1242 695 189 182 33 chrX 86216247 86216428 -80433868 - RMER6D LTR ERVK -512 208 1 3 1242 702 249 15 117 chrX 86216486 86216593 -80433703 - RMER6D LTR ERVK -18 702 615 3 1242 180 0 0 0 chrX 86216593 86216613 -80433683 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 1242 852 39 0 0 chrX 86216613 86216716 -80433580 + (GA)n Simple_repeat Simple_repeat 1 104 0 3 1242 702 249 15 117 chrX 86216716 86216803 -80433493 - RMER6D LTR ERVK -106 614 528 3 1242 4603 273 80 68 chrX 86216811 86218801 -80431495 + Lx3B LINE L1 2278 4412 -1468 3 1242 1005 122 81 11 chrX 86218801 86218975 -80431321 - B2_Mm2 SINE B2 -9 186 1 3 1242 5010 222 71 42 chrX 86218975 86221184 -80429112 + Lx3B LINE L1 4409 6491 -482 3 1242 264 59 0 0 chrX 86221744 86221778 -80428518 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1242 702 300 34 105 chrX 86221900 86222096 -80428200 - Lx9 LINE L1 -319 7325 7143 3 1242 874 104 0 0 chrX 86222096 86222221 -80428075 - L1_Mus1 LINE L1 -4 6563 6439 3 1242 702 300 34 105 chrX 86222221 86222501 -80427795 - Lx9 LINE L1 -502 7142 6883 3 1242 415 302 57 18 chrX 86222573 86222802 -80427494 - L1MA4 LINE L1 -385 5915 5678 3 1242 4289 260 45 16 chrX 86223917 86225144 -80425152 - Lx6 LINE L1 -306 7154 5893 3 1242 2740 260 97 12 chrX 86225158 86226042 -80424254 - Lx6 LINE L1 -591 6869 5911 3 1242 3225 97 0 2 chrX 86226038 86226494 -80423802 - L1_Mus3 LINE L1 -452 6184 5730 3 1242 3237 111 6 14 chrX 86226494 86226997 -80423299 + L1_Mus3 LINE L1 6140 6638 0 3 1242 4847 226 79 14 chrX 86227002 86228202 -80422094 - Lx6 LINE L1 -1789 5907 4635 3 1242 441 0 0 0 chrX 86228202 86228251 -80422045 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1242 4847 226 78 14 chrX 86228251 86228333 -80421963 - Lx6 LINE L1 -1246 4634 4532 3 1242 3855 100 0 2 chrX 86228333 86228863 -80421433 - L1_Mus1 LINE L1 -2 6565 6037 3 1242 4847 226 78 14 chrX 86228863 86229131 -80421165 - Lx6 LINE L1 -1349 4531 4258 3 1242 840 142 0 51 chrX 86229166 86229322 -80420974 + B1_Mus1 SINE Alu 1 148 0 3 1242 420 111 0 0 chrX 86229324 86229387 -80420909 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 3 1242 489 285 178 24 chrX 86229387 86229556 -80420740 + 7SLRNA srpRNA srpRNA 40 234 -80 3 1242 282 301 78 29 chrX 86230100 86230248 -80420048 + MTD LTR MaLR 5 145 -274 3 1242 4778 130 3 21 chrX 86230248 86231353 -80418943 + L1Md_F LINE L1 387 1475 -4408 3 1242 890 106 313 2 chrX 86231355 86231697 -80418599 + L1Md_A LINE L1 1171 1641 -4242 3 1242 7893 107 1 7 chrX 86231707 86232944 -80417352 + L1Md_A LINE L1 2984 4213 -1670 3 1242 2381 108 19 11 chrX 86232944 86233309 -80416987 + L1Md_F2 LINE L1 6213 6580 -2 3 1242 269 257 73 81 chrX 86233471 86233594 -80416702 + MTD LTR MaLR 291 412 -7 3 1242 9483 39 0 3 chrX 86234163 86236026 -80414270 - L1Md_T LINE L1 -13 6569 4714 3 1242 36287 31 0 1 chrX 86236969 86243658 -80406638 - L1Md_T LINE L1 0 6585 1 3 1242 711 83 0 0 chrX 86243659 86243755 -80406541 - B1_Mus2 SINE Alu -6 141 46 3 155 8514 151 37 46 chrX 86243880 86246388 -80403908 + L1Md_F LINE L1 400 2774 -3109 3 1243 4976 102 1 0 chrX 86246400 86247107 -80403189 + L1_Mus2 LINE L1 5859 6566 0 3 1243 219 88 0 0 chrX 86247274 86247308 -80402988 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 3 1243 313 0 0 0 chrX 86247362 86247398 -80402898 + U2 snRNA snRNA 1 36 -152 3 1243 4804 147 65 28 chrX 86247592 86248465 -80401831 - RMER17A2 LTR ERVK 0 906 1 3 1243 198 0 0 0 chrX 86248513 86248535 -80401761 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 1243 832 88 0 0 chrX 86248553 86248667 -80401629 + B1_Mus1 SINE Alu 1 114 -34 3 1243 186 103 0 0 chrX 86248675 86248704 -80401592 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 1243 409 258 31 48 chrX 86248704 86248847 -80401449 + B1F2 SINE Alu 11 149 0 3 1243 503 313 5 62 chrX 86249524 86249689 -80400607 + B3A SINE B2 1 163 -35 3 1243 603 71 0 0 chrX 86249689 86249774 -80400522 + (CA)n Simple_repeat Simple_repeat 1 85 0 3 1243 503 313 5 62 chrX 86249774 86249816 -80400480 + B3A SINE B2 164 196 -2 3 1243 295 194 43 43 chrX 86250013 86250175 -80400121 + (TATAA)n Simple_repeat Simple_repeat 2 163 0 3 1243 537 58 0 0 chrX 86250184 86250253 -80400043 + (TA)n Simple_repeat Simple_repeat 2 70 0 3 1243 952 237 21 3 chrX 86251131 86251419 -80398877 + L1_Mur2 LINE L1 3822 4114 -1763 3 1243 4369 156 4 13 chrX 86251416 86252234 -80398062 + L1_Mur2 LINE L1 3871 4680 -1197 3 1243 739 220 57 0 chrX 86252238 86252397 -80397899 + RMER20A LTR ERVK 5 172 -344 3 1243 309 299 0 49 chrX 86252402 86252504 -80397792 + RMER13A LTR ERVK 189 285 -575 3 1243 1948 189 7 24 chrX 86252941 86253386 -80396910 + L1_Mur2 LINE L1 4636 5063 -814 3 1243 2502 81 107 11 chrX 86253565 86253938 -80396358 + RLTR9E LTR ERVK 1 409 0 3 1243 821 254 110 20 chrX 86253939 86254293 -80396003 + ETnERV2-int LTR ERVK 2 387 -2927 3 1243 4647 149 60 28 chrX 86254307 86255287 -80395009 + ETnERV2-int LTR ERVK 1075 2086 -5320 3 1243 4902 138 19 23 chrX 86255311 86256307 -80393989 + ETnERV2-int LTR ERVK 1995 3362 -4044 3 1243 324 42 125 0 chrX 86256562 86256610 -80393686 + ETnERV2-int LTR ERVK 3441 3494 -3912 3 1243 2431 86 236 26 chrX 86256610 86257063 -80393233 - RLTR6_Mm LTR ERV1 -70 584 37 3 1243 236 161 215 46 chrX 86257108 86257173 -80393123 - RLTR6_Mm LTR ERV1 -578 76 1 3 1243 63526 18 16 1 chrX 86257173 86264840 -80385456 - RLTR6-int LTR ERV1 0 7778 1 3 1243 2545 91 226 25 chrX 86264840 86265314 -80384982 - RLTR6_Mm LTR ERV1 -49 605 37 3 1243 14549 107 32 5 chrX 86265424 86267636 -80382660 + ETnERV2-int LTR ERVK 3491 5762 -1644 3 1243 2948 209 132 44 chrX 86267625 86268626 -80381670 + RMER16-int LTR ERVK 3088 4176 -1230 3 1243 725 147 8 8 chrX 86268633 86268763 -80381533 + ETnERV2-int LTR ERVK 6098 6227 -1179 3 1243 1140 127 63 5 chrX 86268811 86269001 -80381295 + ETnERV2-int LTR ERVK 6222 6422 -984 3 1243 487 105 0 0 chrX 86269219 86269295 -80381001 + ETnERV2-int LTR ERVK 7331 7406 0 3 1243 2815 102 12 7 chrX 86269295 86269702 -80380594 + RLTR9E LTR ERVK 1 409 0 3 1243 974 285 63 44 chrX 86270501 86270868 -80379428 - MTEa LTR MaLR -8 371 3 3 1243 180 111 0 0 chrX 86270958 86270985 -80379311 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1243 725 299 68 16 chrX 86271591 86272019 -80378277 - L1MA6 LINE L1 -375 5925 5470 3 1243 1755 192 11 10 chrX 86272118 86272601 -80377695 + L1_Mur2 LINE L1 379 794 -6292 3 1243 794 216 6 6 chrX 86272606 86272774 -80377522 + Lx5 LINE L1 6228 6395 -655 3 1243 2920 116 16 2 chrX 86272774 86273223 -80377073 + Lx LINE L1 6193 6647 -7 3 1243 637 296 81 34 chrX 86274041 86274765 -80375531 + L1_Mur2 LINE L1 1249 2004 -3873 3 1243 21 0 0 0 chrX 86274915 86274936 -80375360 + AT_rich Low_complexity Low_complexity 1 21 0 3 1243 369 268 31 0 chrX 86274993 86275090 -80375206 - B3A SINE B2 -98 100 1 3 1243 662 269 58 5 chrX 86275090 86275399 -80374897 + L1_Mur2 LINE L1 2132 2473 -3374 3 1243 387 263 114 13 chrX 86275446 86275604 -80374692 + L1M2 LINE L1 2492 2665 -3478 3 1243 1343 308 43 23 chrX 86275620 86276391 -80373905 + L1_Mur2 LINE L1 4507 5292 -588 3 1243 3156 130 6 26 chrX 86277022 86277528 -80372768 - Lx3A LINE L1 -2 6979 6484 3 1243 4828 113 22 1 chrX 86277529 86278018 -80372278 - L1_Mur1 LINE L1 -116 5770 5281 3 1243 723 104 0 0 chrX 86278018 86278124 -80372172 + (TTTC)n Simple_repeat Simple_repeat 2 107 0 3 1243 4828 113 22 1 chrX 86278124 86278368 -80371928 - L1_Mur1 LINE L1 -606 5280 5023 3 1243 1247 68 0 0 chrX 86278350 86278512 -80371784 + L1_Mur1 LINE L1 4884 5045 -841 3 1243 2389 189 4 9 chrX 86279129 86279592 -80370704 + RMER6B LTR ERVK 1 461 0 3 1243 235 325 166 38 chrX 86280398 86280609 -80369687 - MLT1E2 LTR MaLR -4 623 386 3 1243 473 58 161 0 chrX 86280751 86280838 -80369458 + Lx LINE L1 6547 6647 -7 3 1243 228 375 10 10 chrX 86280979 86281076 -80369220 - MLT1E2 LTR MaLR -554 99 3 3 1243 324 0 0 0 chrX 86281312 86281348 -80368948 + (TTA)n Simple_repeat Simple_repeat 3 38 0 3 1243 4013 74 11 9 chrX 86281437 86281993 -80368303 - L1_Mus2 LINE L1 0 6566 6010 3 1243 1514 234 110 11 chrX 86282027 86282399 -80367897 + MTC LTR MaLR 13 421 0 3 1243 1853 189 44 53 chrX 86282398 86282853 -80367443 + MTC-int LTR MaLR 2 404 -854 3 1243 4226 34 0 0 chrX 86282853 86283349 -80366947 + L1Md_T LINE L1 6082 6577 -5 3 1243 3516 230 65 32 chrX 86283349 86284266 -80366030 + MTC-int LTR MaLR 380 1256 -2 3 1243 1593 233 65 15 chrX 86284268 86284669 -80365627 + MTC LTR MaLR 1 421 0 3 1243 1356 289 94 4 chrX 86284960 86285427 -80364869 - Lx6 LINE L1 -26 7434 6531 3 1243 1270 61 10 0 chrX 86285436 86285634 -80364662 + (TTTC)n Simple_repeat Simple_repeat 1 199 0 3 1243 420 111 0 0 chrX 86285634 86285697 -80364599 + (TTCC)n Simple_repeat Simple_repeat 2 64 0 3 1243 700 62 10 30 chrX 86285699 86285799 -80364497 - B1_Mm SINE Alu 0 147 50 3 1243 3121 194 35 21 chrX 86288288 86288919 -80361377 + RLTR26 LTR ERVK 1 640 -2 3 1243 408 20 0 0 chrX 86289358 86289407 -80360889 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1243 874 298 45 47 chrX 86289613 86289993 -80360303 - MTE2a LTR MaLR 0 379 1 3 1243 7109 28 8 2 chrX 86290216 86291071 -80359225 - L1Md_F3 LINE L1 0 6584 5725 3 1243 495 60 0 0 chrX 86291084 86291151 -80359145 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 1243 25 0 0 0 chrX 86291526 86291551 -80358745 + AT_rich Low_complexity Low_complexity 1 25 0 3 1243 226 265 0 48 chrX 86291652 86291755 -80358541 + A-rich Low_complexity Low_complexity 4 101 0 3 1243 274 297 139 0 chrX 86291757 86291858 -80358438 + B4A SINE B4 1 115 -177 3 1243 273 247 97 43 chrX 86291870 86291963 -80358333 + B4A SINE B4 182 279 -13 3 1243 204 40 0 0 chrX 86291978 86292003 -80358293 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1243 7875 147 37 17 chrX 86292717 86294084 -80356212 + Lx2 LINE L1 5587 6981 -16 3 1243 585 121 0 0 chrX 86294081 86294164 -80356132 - MusHAL1 LINE L1 -1678 1034 952 3 1243 1492 153 27 4 chrX 86294164 86294427 -80355869 + Lx LINE L1 6378 6646 -8 3 1243 218 303 0 0 chrX 86294431 86294535 -80355761 + A-rich Low_complexity Low_complexity 1 104 0 3 1243 270 356 59 44 chrX 86294969 86295104 -80355192 - B4A SINE B4 -129 163 27 3 1243 25 51 0 0 chrX 86295132 86295171 -80355125 + AT_rich Low_complexity Low_complexity 1 39 0 3 1243 30 0 0 0 chrX 86295268 86295298 -80354998 + AT_rich Low_complexity Low_complexity 1 30 0 3 1243 945 279 24 7 chrX 86295308 86295604 -80354692 + Lx6 LINE L1 7094 7394 -66 3 1243 1391 150 9 105 chrX 86295614 86295957 -80354339 + Lx2 LINE L1 5884 6193 -804 3 1243 1431 199 81 83 chrX 86296097 86296469 -80353827 - RLTR30 LTR ERV1 0 379 9 3 1243 245 298 28 19 chrX 86296827 86296933 -80353363 + Lx8 LINE L1 7358 7464 -9 4 1243 23 0 0 0 chrX 86297107 86297130 -80353166 + AT_rich Low_complexity Low_complexity 1 23 0 4 1243 6785 154 15 14 chrX 86297140 86298295 -80352001 - Lx3B LINE L1 -5 6968 5813 4 1243 32 0 0 0 chrX 86298548 86298580 -80351716 + AT_rich Low_complexity Low_complexity 1 32 0 4 1243 592 278 12 0 chrX 86298665 86298827 -80351469 - Lx6 LINE L1 -11 7449 7286 4 1243 21 0 0 0 chrX 86298827 86298848 -80351448 + AT_rich Low_complexity Low_complexity 1 21 0 4 1243 25 0 0 0 chrX 86298873 86298898 -80351398 + AT_rich Low_complexity Low_complexity 1 25 0 4 1243 8313 124 17 34 chrX 86299072 86301311 -80348985 + L1VL2 LINE L1 162 2359 -1256 4 1243 6173 92 5 2 chrX 86301338 86302183 -80348113 - L1Md_F2 LINE L1 -19 6563 5717 4 1243 4689 98 7 12 chrX 86302173 86302792 -80347504 + L1_Mm LINE L1 4677 5293 -590 4 1243 3552 66 9 0 chrX 86302792 86303247 -80347049 + L1Md_F2 LINE L1 6122 6580 -2 4 1243 4689 98 7 12 chrX 86303247 86303316 -80346980 + L1_Mm LINE L1 5294 5362 -521 4 1243 29 60 0 0 chrX 86303628 86303678 -80346618 + AT_rich Low_complexity Low_complexity 1 50 0 4 1243 940 130 27 0 chrX 86303879 86304025 -80346271 + B1_Mur4 SINE Alu 1 150 0 4 1243 810 186 64 27 chrX 86304237 86304425 -80345871 + B2_Mm2 SINE B2 1 195 0 4 1243 242 0 61 0 chrX 86304991 86305024 -80345272 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1243 386 428 58 51 chrX 86306898 86307292 -80343004 + LTR16B LTR ERVL 26 422 -41 4 1243 1599 96 31 27 chrX 86307646 86307903 -80342393 - L1Md_F2 LINE L1 -1 6581 6324 4 1243 690 331 6 0 chrX 86307904 86308082 -80342214 + MTE2b LTR MaLR 159 337 -42 4 1243 266 50 0 24 chrX 86308082 86308123 -80342173 + (GTTTG)n Simple_repeat Simple_repeat 4 43 0 4 1243 688 311 5 42 chrX 86308123 86308142 -80342154 + MTE2b LTR MaLR 334 349 -30 4 1243 27205 63 2 1 chrX 86308142 86312354 -80337942 - L1Md_F2 LINE L1 -31 6551 2339 4 1243 1600 179 3 3 chrX 86312352 86312638 -80337658 + L1Md_F LINE L1 156 441 -6078 4 1243 3709 67 2 0 chrX 86312630 86313111 -80337185 + L1Md_F LINE L1 573 1054 -5465 4 1243 270 382 47 37 chrX 86313433 86313623 -80336673 + B4 SINE B4 12 203 -89 4 1243 8168 120 12 19 chrX 86313867 86316183 -80334113 - L1_Mus1 LINE L1 -2 6565 4353 4 1243 37101 43 1 22 chrX 86316221 86319469 -80330827 - L1Md_F2 LINE L1 0 6582 3456 4 1243 6556 13 0 3 chrX 86319469 86320217 -80330079 - L1Md_T LINE L1 0 6582 5837 4 1243 37101 47 1 31 chrX 86320217 86323074 -80327222 - L1Md_F2 LINE L1 -2428 3455 643 4 1243 19114 141 21 11 chrX 86323076 86327214 -80323082 - L1_Mus1 LINE L1 -1516 4367 185 4 1243 200 206 38 76 chrX 86327415 86327520 -80322776 + T-rich Low_complexity Low_complexity 2 102 0 4 1243 21 36 0 0 chrX 86328204 86328232 -80322064 + AT_rich Low_complexity Low_complexity 1 28 0 4 1243 1261 101 5 5 chrX 86329099 86329288 -80321008 + MT2C_Mm LTR ERVL 1 189 -286 4 1243 3117 237 32 12 chrX 86329288 86329980 -80320316 + Lx5 LINE L1 6299 7004 -46 4 1243 6440 214 38 8 chrX 86330020 86331657 -80318639 + Lx4B LINE L1 5350 7051 -7 4 1243 1653 201 79 2 chrX 86331772 86332227 -80318069 - Lx9 LINE L1 -16 7628 7115 4 1243 231 88 0 0 chrX 86333572 86333606 -80316690 + (TTA)n Simple_repeat Simple_repeat 1 34 0 4 1243 4847 162 23 9 chrX 86333607 86334461 -80315835 - Lx3B LINE L1 -4 6969 6104 4 1243 298 206 48 0 chrX 86334462 86334525 -80315771 - Lx3B LINE L1 -976 5997 5932 4 1243 278 163 0 0 chrX 86334522 86334571 -80315725 + Lx3C LINE L1 5880 5928 -1048 4 1243 699 12 0 0 chrX 86334802 86334882 -80315414 + (TG)n Simple_repeat Simple_repeat 2 81 0 4 1243 347 375 9 0 chrX 86334889 86335001 -80315295 - RSINE1 SINE B4 -13 152 40 4 1243 3313 133 11 2 chrX 86336526 86337054 -80313242 - Lx3A LINE L1 -1 6980 6448 4 1243 2005 244 71 49 chrX 86337396 86338254 -80312042 - L1_Rod LINE L1 -884 4963 4087 4 1243 663 228 88 10 chrX 86338257 86338461 -80311835 - L1_Mur3 LINE L1 -1956 3924 3705 4 1243 4027 259 47 35 chrX 86338454 86340017 -80310279 - L1_Rod LINE L1 -2598 3249 1667 4 1243 440 236 21 0 chrX 86340167 86340311 -80309985 - L1_Rod LINE L1 -3981 1866 1720 4 1243 1156 279 11 9 chrX 86340888 86341330 -80308966 - L1_Rod LINE L1 -4184 1663 1221 4 1243 621 90 20 107 chrX 86341330 86341480 -80308816 - Lx LINE L1 -6 6648 6512 4 1243 1065 158 20 5 chrX 86341486 86341683 -80308613 - L1_Mur2 LINE L1 -571 5306 5107 4 1243 3281 154 7 4 chrX 86341684 86342238 -80308058 + Lx2 LINE L1 6442 6997 0 4 1243 8279 15 0 0 chrX 86342281 86343219 -80307077 + L1Md_T LINE L1 5645 6582 0 4 1243 23 0 0 0 chrX 86343221 86343244 -80307052 + AT_rich Low_complexity Low_complexity 1 23 0 4 1243 279 54 0 0 chrX 86343296 86343333 -80306963 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 4 1243 654 255 14 28 chrX 86343335 86343480 -80306816 - B1_Mur1 SINE Alu 0 149 7 4 1243 387 286 43 171 chrX 86343340 86343551 -80306745 - B4 SINE B4 -69 223 40 4 1243 1911 60 0 4 chrX 86344195 86344445 -80305851 + L1Md_F2 LINE L1 6332 6580 -2 4 1243 449 310 10 10 chrX 86345008 86345132 -80305164 - B1_Mus2 SINE Alu -1 119 5 4 1243 280 162 135 0 chrX 86345265 86345281 -80305015 - Lx9 LINE L1 -149 7495 7480 4 1243 336 24 0 0 chrX 86345281 86345322 -80304974 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1243 280 162 135 0 chrX 86345322 86345379 -80304917 - Lx9 LINE L1 -165 7479 7413 4 1243 2318 101 199 0 chrX 86345822 86346218 -80304078 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1243 1108 118 0 92 chrX 86346219 86346425 -80303871 + IAPEz-int LTR ERVK 9 195 -6286 4 1243 237 250 0 0 chrX 86346434 86346478 -80303818 + RLTR27 LTR ERVK 232 275 -34 4 1243 3872 57 2 18 chrX 86346478 86346981 -80303315 + IAPEz-int LTR ERVK 168 662 -5819 4 1243 2292 50 0 0 chrX 86346981 86347259 -80303037 + IAPEz-int LTR ERVK 1359 1636 -4845 4 1243 6194 38 3 7 chrX 86347258 86348005 -80302291 + IAPEz-int LTR ERVK 5736 6479 -2 4 1243 2363 96 199 0 chrX 86348007 86348403 -80301893 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1243 331 291 158 35 chrX 86348466 86348669 -80301627 - RMER15 LTR ERVL -2 573 346 4 1243 1563 37 21 0 chrX 86349662 86349851 -80300445 + B2_Mm1t SINE B2 1 193 0 4 1243 330 333 130 11 chrX 86350250 86350435 -80299861 - MIR SINE MIR -54 208 2 4 1243 36 70 0 0 chrX 86350467 86350538 -80299758 + AT_rich Low_complexity Low_complexity 1 71 0 4 1243 30 69 0 0 chrX 86351450 86351508 -80298788 + AT_rich Low_complexity Low_complexity 1 58 0 4 1243 513 216 143 8 chrX 86352089 86352215 -80298081 + B1_Mur4 SINE Alu 2 144 -6 4 1243 242 27 0 0 chrX 86352390 86352427 -80297869 + Lx LINE L1 6611 6647 -7 4 1243 5472 89 7 19 chrX 86352555 86353376 -80296920 + RLTR22_Mur LTR ERVK 1 811 -1037 4 1243 246 325 69 78 chrX 86353683 86353900 -80296396 + RMER12 LTR ERVK 1108 1322 0 4 1243 183 96 19 37 chrX 86354279 86354333 -80295963 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 4 1243 5614 138 3 27 chrX 86354335 86355238 -80295058 - Lx2 LINE L1 -1 6996 6115 4 1243 3020 76 2 5 chrX 86355957 86356354 -80293942 + MTA_Mm LTR MaLR 1 396 0 4 1243 7281 236 73 52 chrX 86358141 86360855 -80289441 + L1_Mur3 LINE L1 88 2830 -3050 4 1243 2470 115 32 42 chrX 86360855 86361262 -80289034 - RLTR9D LTR ERVK 0 403 1 4 1243 7281 211 51 40 chrX 86361262 86361734 -80288562 + L1_Mur3 LINE L1 2831 3336 -2544 4 1243 1674 268 63 48 chrX 86361735 86362273 -80288023 + L1_Mur2 LINE L1 493 1038 -6048 4 1243 342 0 0 0 chrX 86362276 86362314 -80287982 + (A)n Simple_repeat Simple_repeat 1 38 0 4 1243 2489 174 10 111 chrX 86362314 86362519 -80287777 + L1_Mur2 LINE L1 1824 1967 -3910 4 1243 8022 36 11 5 chrX 86362519 86363509 -80286787 + L1Md_F3 LINE L1 5589 6584 0 4 1243 2489 174 10 111 chrX 86363509 86364012 -80286284 + L1_Mur2 LINE L1 1968 2460 -3417 4 1243 6794 134 19 3 chrX 86364074 86365219 -80285077 - MusHAL1 LINE L1 -281 2431 1269 4 1243 6436 210 30 9 chrX 86365220 86365557 -80284739 + Lx2A1 LINE L1 5671 6038 -970 4 1243 432 0 0 0 chrX 86365557 86365605 -80284691 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1243 423 0 0 0 chrX 86365606 86365653 -80284643 + (GA)n Simple_repeat Simple_repeat 1 47 0 4 1243 6436 210 30 9 chrX 86365653 86365694 -80284602 + Lx2A1 LINE L1 6039 6077 -931 4 1243 5023 152 92 5 chrX 86365694 86366575 -80283721 - RMER17B LTR ERVK 0 958 1 4 1243 6436 210 30 9 chrX 86366575 86367498 -80282798 + Lx2A1 LINE L1 6078 7002 -6 4 1243 7813 157 23 42 chrX 86367492 86369111 -80281185 + L1_Mur2 LINE L1 3024 4611 -1266 4 1243 549 0 0 0 chrX 86369149 86369210 -80281086 + (CAAAA)n Simple_repeat Simple_repeat 5 65 0 4 1243 326 85 17 0 chrX 86369274 86369333 -80280963 + (TTTTG)n Simple_repeat Simple_repeat 5 64 0 4 1243 1026 99 0 14 chrX 86369333 86369477 -80280819 - B1_Mus1 SINE Alu -5 143 2 4 1243 2600 217 25 127 chrX 86369773 86369793 -80280503 + L1_Mur2 LINE L1 4602 4623 -1254 4 1243 270 0 0 0 chrX 86369793 86369823 -80280473 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 1243 2600 217 25 127 chrX 86369823 86370651 -80279645 + L1_Mur2 LINE L1 4624 5363 -514 4 1243 805 102 0 8 chrX 86370651 86370770 -80279526 + B2_Mm2 SINE B2 3 120 -75 4 1243 5995 246 44 18 chrX 86370773 86372194 -80278102 + Lx6 LINE L1 6001 7458 -2 4 1243 322 253 133 0 chrX 86372246 86372404 -80277892 + L1MC4 LINE L1 7486 7664 -378 4 1243 3310 139 108 24 chrX 86372972 86373600 -80276696 + RMER17B LTR ERVK 1 681 -277 4 1243 2247 99 0 113 chrX 86373604 86373992 -80276304 - L1_Mus2 LINE L1 0 6566 6223 4 1243 2479 47 13 0 chrX 86373998 86374347 -80275949 - L1_Mus2 LINE L1 -668 5898 5546 4 1243 998 237 143 20 chrX 86374366 86374659 -80275637 + RMER17B LTR ERVK 630 958 0 4 1243 23 33 0 0 chrX 86374762 86374792 -80275504 + AT_rich Low_complexity Low_complexity 1 30 0 4 1243 29 28 0 0 chrX 86375582 86375618 -80274678 + AT_rich Low_complexity Low_complexity 1 36 0 4 1243 266 399 40 7 chrX 86375661 86375810 -80274486 - MER5A DNA MER1_type -21 168 15 4 155 4433 124 90 17 chrX 86375871 86376625 -80273671 + RMER17D2 LTR ERVK 1 809 0 4 1244 21 0 0 0 chrX 86376788 86376809 -80273487 + AT_rich Low_complexity Low_complexity 1 21 0 4 1244 183 80 0 0 chrX 86377046 86377071 -80273225 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1244 546 333 49 49 chrX 86377330 86377597 -80272699 + B4A SINE B4 2 269 -23 4 1244 324 0 0 0 chrX 86377597 86377633 -80272663 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1244 546 333 49 49 chrX 86377633 86377652 -80272644 + B4A SINE B4 270 288 -4 4 1244 721 300 116 106 chrX 86378127 86378565 -80271731 + MLT1E3 LTR MaLR 69 522 -132 4 1244 1261 158 26 0 chrX 86378565 86378793 -80271503 - Lx LINE L1 0 6654 6421 4 1244 721 300 116 106 chrX 86378793 86378864 -80271432 + MLT1E3 LTR MaLR 494 583 -71 4 1244 4379 150 7 35 chrX 86378864 86379534 -80270762 + L1Md_A LINE L1 525 1178 -5546 4 1244 6208 32 0 5 chrX 86379534 86380276 -80270020 + L1Md_T LINE L1 5845 6582 0 4 1244 4379 150 7 35 chrX 86380276 86380429 -80269867 + L1Md_A LINE L1 1179 1325 -5399 4 1244 3423 57 28 0 chrX 86380429 86380853 -80269443 + RLTR10C LTR ERVK 1 436 0 4 1244 1457 69 10 7 chrX 86380853 86381116 -80269180 + MMERVK10C-int LTR ERVK 1 343 -7238 4 1244 713 194 12 66 chrX 86381114 86381405 -80268891 + MMERVK10C-int LTR ERVK 729 952 -6629 4 1244 650 211 387 42 chrX 86381494 86381847 -80268449 + MMERVK10C-int LTR ERVK 312 666 -5471 4 1244 363 212 125 0 chrX 86381851 86381931 -80268365 + MMERVK10C-int LTR ERVK 938 1027 -5110 4 1244 400 79 0 0 chrX 86381923 86381986 -80268310 + MMERVK10C-int LTR ERVK 1885 1947 -5634 4 1244 14450 45 0 1 chrX 86382017 86383742 -80266554 + MMERVK10C-int LTR ERVK 4028 5751 -1830 4 1244 6871 60 1 0 chrX 86383742 86384606 -80265690 - L1Md_T LINE L1 -2 6580 5716 4 1244 14421 54 10 28 chrX 86384606 86386479 -80263817 + MMERVK10C-int LTR ERVK 5742 7581 0 4 1244 3297 66 28 9 chrX 86386479 86386907 -80263389 + RLTR10C LTR ERVK 1 436 0 4 1244 15059 73 7 15 chrX 86386907 86389044 -80261252 + L1_Mm LINE L1 1320 3437 -2446 5 1244 1028 97 0 0 chrX 86389037 86389182 -80261114 + L1_Mm LINE L1 3778 3922 -1961 5 1244 1083 58 6 19 chrX 86389182 86389339 -80260957 + L1Md_F2 LINE L1 6414 6568 -14 5 1244 2668 118 25 0 chrX 86389357 86389755 -80260541 - Lx2 LINE L1 -213 6784 6377 5 1244 1106 122 180 0 chrX 86390003 86390192 -80260104 + Lx3B LINE L1 6397 6619 -354 5 1244 544 102 0 0 chrX 86390203 86390291 -80260005 + L1Md_F2 LINE L1 6492 6579 -3 5 1244 28 0 0 0 chrX 86390305 86390333 -80259963 + AT_rich Low_complexity Low_complexity 1 28 0 5 1244 240 162 0 0 chrX 86390578 86390615 -80259681 + ORR1C2 LTR MaLR 1 37 -347 5 1244 462 108 0 0 chrX 86390866 86390940 -80259356 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 1244 1205 48 0 0 chrX 86391668 86391815 -80258481 + B1_Mus2 SINE Alu 1 147 0 5 1244 617 283 18 25 chrX 86391931 86392094 -80258202 + RMER13A LTR ERVK 1 162 -698 5 1244 727 310 35 0 chrX 86392316 86392516 -80257780 + B3 SINE B2 5 211 -5 5 1244 268 219 158 31 chrX 86392981 86393108 -80257188 + Lx6 LINE L1 7318 7460 0 5 1244 32326 105 11 1 chrX 86393621 86399744 -80250552 - L1_Mus2 LINE L1 -4 6562 374 5 1244 471 200 58 9 chrX 86399756 86399903 -80250393 - RMER6C LTR ERVK -497 193 32 5 1244 789 152 0 61 chrX 86399873 86400020 -80250276 - RMER6C LTR ERVK -552 138 1 5 1244 21 0 0 0 chrX 86400219 86400240 -80250056 + AT_rich Low_complexity Low_complexity 1 21 0 5 1244 1763 180 104 3 chrX 86400888 86401244 -80249052 - ORR1B1 LTR MaLR 0 394 3 5 1244 44 0 0 0 chrX 86402937 86402981 -80247315 + AT_rich Low_complexity Low_complexity 1 44 0 5 1244 22 0 0 0 chrX 86402993 86403015 -80247281 + AT_rich Low_complexity Low_complexity 1 22 0 5 1244 37 39 0 0 chrX 86403115 86403166 -80247130 + AT_rich Low_complexity Low_complexity 1 51 0 5 1244 204 67 0 0 chrX 86404326 86404356 -80245940 + (TAAAAA)n Simple_repeat Simple_repeat 1 30 0 5 1244 180 97 0 0 chrX 86404847 86404878 -80245418 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1244 377 316 78 25 chrX 86404974 86405217 -80245079 + L1_Rod LINE L1 130 385 -6787 5 1244 646 230 79 0 chrX 86405217 86405382 -80244914 + Lx9 LINE L1 6808 6985 -659 5 1244 1337 269 124 50 chrX 86405384 86405982 -80244314 - RLTR26 LTR ERVK 0 642 1 5 1244 4727 164 44 13 chrX 86405983 86406560 -80243736 - MERVK26-int LTR ERVK 0 6919 6320 5 1244 423 0 0 0 chrX 86406560 86406607 -80243689 + (TC)n Simple_repeat Simple_repeat 2 48 0 5 1244 4727 164 44 13 chrX 86406607 86406874 -80243422 - MERVK26-int LTR ERVK -600 6319 6050 5 1244 7059 175 62 21 chrX 86406875 86408216 -80242080 - MERVK26-int LTR ERVK -3524 3395 2000 5 1244 3005 153 12 8 chrX 86408651 86409139 -80241157 - MERVK26-int LTR ERVK -4904 2015 1526 5 1244 2911 98 5 5 chrX 86409140 86409561 -80240735 - BGLII LTR ERVK 0 421 1 5 1244 5501 195 67 16 chrX 86409572 86410804 -80239492 + Lx4B LINE L1 5761 7054 -4 5 1244 1171 216 70 48 chrX 86410840 86411239 -80239057 + L1_Rod LINE L1 4953 5360 -487 5 1244 367 175 0 0 chrX 86411239 86411296 -80239000 + RMER17A2 LTR ERVK 794 850 -56 5 1244 394 297 145 0 chrX 86411417 86411555 -80238741 + Lx9 LINE L1 6459 6616 -1028 5 1244 1292 281 97 67 chrX 86411558 86412320 -80237976 + Lx9 LINE L1 6776 7560 -84 5 1244 32326 95 13 11 chrX 86413408 86419610 -80230686 - L1Md_F2 LINE L1 -3 6579 371 5 1244 729 300 62 32 chrX 86420059 86420465 -80229831 - L1ME1 LINE L1 -203 5976 5559 5 1244 644 290 96 22 chrX 86420534 86420763 -80229533 - MT2A LTR ERVL 0 533 288 5 1244 260 271 59 26 chrX 86420783 86420891 -80229405 - MTC LTR MaLR -262 117 1 5 1244 310 279 0 0 chrX 86421523 86421602 -80228694 - MER67C LTR ERV1 -39 672 594 5 1244 462 312 9 0 chrX 86421633 86421745 -80228551 + B4A SINE B4 3 115 -177 5 1244 376 225 88 0 chrX 86421972 86422052 -80228244 - B1F2 SINE Alu -19 130 44 5 1244 687 57 0 0 chrX 86422352 86422440 -80227856 + (TA)n Simple_repeat Simple_repeat 1 88 0 5 1244 952 232 62 32 chrX 86422610 86422948 -80227348 + RCHARR1 DNA MER1_type 226 582 -392 5 1244 232 167 0 0 chrX 86422952 86422994 -80227302 - MT2B LTR ERVL 0 584 543 5 1244 834 294 49 63 chrX 86423052 86423536 -80226760 - MT2B LTR ERVL -76 525 1 5 1244 1270 227 103 3 chrX 86423540 86423889 -80226407 + RCHARR1 DNA MER1_type 585 968 -6 5 1244 660 279 106 6 chrX 86423896 86424217 -80226079 - MER67C LTR ERV1 -311 400 48 5 1244 296 348 17 43 chrX 86424252 86424369 -80225927 - PB1D10 SINE Alu -1 116 3 5 1244 361 348 71 13 chrX 86424443 86424682 -80225614 + L1M2 LINE L1 3286 3538 -2605 5 1244 2264 125 86 0 chrX 86424746 86425097 -80225199 - L1_Mm LINE L1 -33 5850 5470 5 1244 1847 134 0 7 chrX 86425096 86425389 -80224907 + L1Md_A LINE L1 5295 5585 -298 5 1244 8197 34 1 26 chrX 86425390 86426411 -80223885 + L1Md_A LINE L1 5587 6581 -1 5 1244 181 93 22 65 chrX 86426456 86426502 -80223794 + (TTATA)n Simple_repeat Simple_repeat 1 44 0 5 1244 6027 104 19 2 chrX 86426619 86427504 -80222792 + L1_Mus3 LINE L1 5739 6638 0 5 1244 293 358 45 0 chrX 86427599 86427775 -80222521 + L1M2 LINE L1 5606 5789 -511 5 1244 479 221 0 8 chrX 86427930 86428058 -80222238 + (TA)n Simple_repeat Simple_repeat 1 127 0 5 1244 2610 44 7 146 chrX 86428150 86428601 -80221695 - RLTR10 LTR ERVK -2 388 1 5 1244 17089 30 3 7 chrX 86428603 86430609 -80219687 - RLTR10-int LTR ERVK -3 1984 9 5 1244 2796 41 7 146 chrX 86430610 86431063 -80219233 - RLTR10 LTR ERVK 0 390 1 5 1244 488 293 13 20 chrX 86431260 86431410 -80218886 + Lx8 LINE L1 7041 7189 -284 5 1244 1465 206 30 26 chrX 86431452 86431756 -80218540 + RLTR25A LTR ERVK 8 312 -791 5 1244 329 0 24 0 chrX 86431756 86431797 -80218499 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 5 1244 205 200 23 12 chrX 86431834 86431920 -80218376 + (TAGA)n Simple_repeat Simple_repeat 4 90 0 5 1244 778 108 36 0 chrX 86431942 86432109 -80218187 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 5 1244 401 176 40 7 chrX 86432146 86432295 -80218001 + (TAGA)n Simple_repeat Simple_repeat 4 157 0 5 1244 704 173 6 0 chrX 86432312 86432491 -80217805 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 5 1244 1860 202 19 11 chrX 86432558 86432930 -80217366 + RLTR25A LTR ERVK 450 883 -220 5 1244 356 0 23 0 chrX 86432930 86432974 -80217322 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1244 1613 245 58 30 chrX 86432974 86433132 -80217164 + RLTR25A LTR ERVK 811 1102 -1 5 1244 464 252 165 59 chrX 86433132 86433368 -80216928 + Lx8 LINE L1 7211 7471 -2 5 1244 414 0 0 0 chrX 86433566 86433612 -80216684 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1244 188 256 218 0 chrX 86433669 86433747 -80216549 - L2a LINE L2 -28 3398 3304 5 1244 765 357 49 22 chrX 86433770 86434320 -80215976 - Lx8 LINE L1 -2 7471 6907 5 1244 12095 142 32 3 chrX 86434554 86437588 -80212708 - L1Md_F2 LINE L1 0 6582 3439 5 1244 538 281 99 6 chrX 86438008 86438169 -80212127 + B3A SINE B2 3 178 -20 5 1244 589 238 16 23 chrX 86438153 86438282 -80212014 + B1_Mur4 SINE Alu 15 142 -8 5 1244 234 128 0 0 chrX 86439401 86439440 -80210856 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1244 351 0 0 0 chrX 86439784 86439823 -80210473 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 5 1244 1168 57 0 0 chrX 86439825 86439965 -80210331 - B1_Mus2 SINE Alu -6 141 2 5 1244 3044 82 2 5 chrX 86440477 86440891 -80209405 - L1_Mus1 LINE L1 -3 6564 6152 5 1244 21 0 0 0 chrX 86441309 86441330 -80208966 + AT_rich Low_complexity Low_complexity 1 21 0 5 1244 757 337 23 16 chrX 86441375 86441680 -80208616 - ORR1D2 LTR MaLR -63 307 1 5 1244 351 278 41 0 chrX 86441686 86441783 -80208513 - ORR1D2-int LTR MaLR 0 1509 1409 5 1244 243 150 0 0 chrX 86441860 86441920 -80208376 + (A)n Simple_repeat Simple_repeat 1 60 0 5 1244 317 269 174 49 chrX 86441938 86442122 -80208174 - RMER21B LTR ERV1 -371 471 265 5 1244 809 324 65 60 chrX 86442215 86442388 -80207908 - ORR1D2-int LTR MaLR -72 1298 1116 5 1244 207 0 0 0 chrX 86442388 86442411 -80207885 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 5 1244 809 324 65 60 chrX 86442411 86442501 -80207795 - ORR1D2-int LTR MaLR -255 1115 1033 5 1244 183 80 0 0 chrX 86442501 86442526 -80207770 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 1244 809 324 65 60 chrX 86442526 86442694 -80207602 - ORR1D2-int LTR MaLR -338 1032 864 5 1244 6535 139 20 19 chrX 86442761 86443868 -80206428 - Lx LINE L1 -6 6648 5542 5 1244 3158 187 50 0 chrX 86443867 86444531 -80205765 + Lx LINE L1 4846 5542 -344 5 1244 1199 330 45 32 chrX 86444531 86445165 -80205131 - ORR1D2-int LTR MaLR -940 640 3 5 1244 4052 8 2 0 chrX 86445183 86445685 -80204611 + L1Md_A LINE L1 232 734 -5990 5 1244 18474 58 1 4 chrX 86445671 86448986 -80201310 - L1Md_Gf LINE L1 -2163 3723 324 5 1244 12575 22 1 0 chrX 86448958 86450487 -80199809 + L1Md_T LINE L1 4057 5586 -297 5 1244 8483 32 0 0 chrX 86450487 86451483 -80198813 + L1Md_T LINE L1 5587 6582 0 5 1244 36829 5 0 0 chrX 86451493 86456360 -80193936 + L1Md_A LINE L1 720 5586 -297 5 1244 8978 4 1 0 chrX 86456360 86457354 -80192942 + L1Md_A LINE L1 5587 6581 -1 5 1244 4072 72 11 0 chrX 86457377 86457906 -80192390 + L1Md_F2 LINE L1 6047 6581 -1 5 1244 439 38 0 0 chrX 86457906 86457959 -80192337 + ORR1A1 LTR MaLR 294 346 0 5 1244 4897 53 2 0 chrX 86458708 86459316 -80190980 + L1Md_F2 LINE L1 5974 6582 0 5 1244 651 256 146 43 chrX 86459567 86459938 -80190358 - RLTR9E LTR ERVK 0 409 1 5 1244 2206 103 9 0 chrX 86460646 86460967 -80189329 + L1_Mus3 LINE L1 6313 6636 -2 5 1244 808 259 68 45 chrX 86462491 86462592 -80187704 - Lx5 LINE L1 -3 7047 6943 5 1244 2718 67 2 110 chrX 86462592 86463027 -80187269 - RLTR10 LTR ERVK -2 388 1 5 1244 808 259 68 45 chrX 86463027 86463236 -80187060 - Lx5 LINE L1 -108 6942 6732 5 1244 364 255 75 7 chrX 86463479 86463625 -80186671 + L1_Mur2 LINE L1 979 1134 -5952 5 1244 1050 52 8 0 chrX 86463624 86463758 -80186538 - L1_Mus2 LINE L1 -134 6432 6298 5 1244 252 275 73 24 chrX 86463758 86463840 -80186456 - LTR50 LTR ERVL -617 178 93 5 1244 3168 222 21 132 chrX 86463840 86464467 -80185829 + L1_Mur2 LINE L1 1186 1825 -4052 5 1244 231 61 0 0 chrX 86464467 86464500 -80185796 + (CTAAA)n Simple_repeat Simple_repeat 3 35 0 5 1244 3168 222 20 136 chrX 86464500 86465038 -80185258 + L1_Mur2 LINE L1 1826 2249 -3628 5 1244 2148 128 0 0 chrX 86465038 86465357 -80184939 + L1_Mus2 LINE L1 6247 6565 -1 5 1244 3168 222 20 136 chrX 86465357 86465531 -80184765 + L1_Mur2 LINE L1 2250 2371 -3506 5 1244 1533 77 48 0 chrX 86465531 86465740 -80184556 - L1_Mus1 LINE L1 -1 6566 6348 5 1244 3402 86 19 14 chrX 86465741 86466377 -80183919 - L1_Mus1 LINE L1 -474 6093 5451 5 1244 4677 125 4 1 chrX 86466373 86467141 -80183155 + L1_Mus1 LINE L1 4686 5455 -428 5 1244 11083 182 56 60 chrX 86467135 86467779 -80182517 + L1_Mur2 LINE L1 2361 3029 -2848 5 1244 252 0 0 0 chrX 86467779 86467807 -80182489 + (TTG)n Simple_repeat Simple_repeat 2 29 0 5 1244 980 85 0 0 chrX 86467807 86467937 -80182359 - B1_Mm SINE Alu -9 138 9 5 1244 11083 182 56 60 chrX 86467937 86469789 -80180507 + L1_Mur2 LINE L1 3030 4992 -885 5 1244 378 0 0 0 chrX 86469789 86469831 -80180465 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 1244 11083 182 56 60 chrX 86469831 86470189 -80180107 + L1_Mur2 LINE L1 4993 5334 -543 5 1244 2200 126 0 0 chrX 86470198 86470507 -80179789 - RLTR27 LTR ERVK 0 309 1 5 1244 1358 269 40 33 chrX 86470507 86471486 -80178810 - MMERVK10C-int LTR ERVK 0 7581 6491 5 1244 2581 298 43 45 chrX 86471593 86473411 -80176885 - MMERVK10C-int LTR ERVK -2103 5478 3663 5 1244 344 404 86 14 chrX 86473745 86474036 -80176260 - MER74C LTR ERVL -37 423 112 5 1244 330 26 0 0 chrX 86474193 86474232 -80176064 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1244 254 206 15 0 chrX 86474242 86474310 -80175986 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 1244 3643 108 11 20 chrX 86474493 86475052 -80175244 - L1_Mus4 LINE L1 -7 6629 6076 5 1244 1123 77 12 0 chrX 86475052 86475220 -80175076 + L1_Mus4 LINE L1 5911 6080 -556 5 1244 24 67 0 0 chrX 86475437 86475482 -80174814 + AT_rich Low_complexity Low_complexity 1 45 0 5 1244 400 102 14 14 chrX 86475512 86475582 -80174714 + L1_Mur2 LINE L1 4377 4446 -1431 5 1244 246 386 16 0 chrX 86475777 86475904 -80174392 + RMER5 LTR ERV1 404 532 -2 5 1244 301 216 225 56 chrX 86475904 86476046 -80174250 + Lx7 LINE L1 6264 6429 -1267 5 1244 1599 93 101 0 chrX 86476080 86476348 -80173948 + RLTR10A LTR ERVK 117 411 0 5 1244 958 93 7 32 chrX 86476350 86476505 -80173791 + IAP-d-int LTR ERVK 304 454 -1533 5 1244 3962 66 0 0 chrX 86476505 86477033 -80173263 + L1Md_F3 LINE L1 5058 5585 -298 5 1244 8282 32 3 0 chrX 86477034 86478015 -80172281 + L1Md_F3 LINE L1 5587 6570 -14 5 1244 207 0 0 0 chrX 86478031 86478054 -80172242 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 6 1244 614 149 11 57 chrX 86478054 86478309 -80171987 + IAP-d-int LTR ERVK 295 602 -1385 5 1244 1852 82 162 0 chrX 86478317 86478656 -80171640 + IAP-d-int LTR ERVK 5007 5400 -1142 5 1244 931 69 49 0 chrX 86478654 86478859 -80171437 + IAP-d-int LTR ERVK 5766 6017 -525 5 1244 1519 86 0 0 chrX 86478866 86479064 -80171232 + IAP-d-int LTR ERVK 6128 6325 -217 5 1244 2275 105 29 13 chrX 86479154 86479531 -80170765 + RLTR10-int LTR ERVK 1284 1666 -321 6 1244 530 121 10 81 chrX 86479535 86479634 -80170662 + RLTR10A LTR ERVK 320 411 0 6 1244 274 194 10 58 chrX 86479672 86479776 -80170520 + T-rich Low_complexity Low_complexity 3 101 0 6 1244 4289 110 68 5 chrX 86480206 86480866 -80169430 - L1_Mus4 LINE L1 -7 6629 5928 6 1244 2446 101 0 0 chrX 86480866 86481262 -80169034 + L1_Mus4 LINE L1 5548 5943 -693 6 1244 2373 133 20 2 chrX 86481286 86481679 -80168617 - L1_Mus2 LINE L1 -1 6637 6238 6 1244 6640 126 0 2 chrX 86481680 86482895 -80167401 - L1_Mus2 LINE L1 -596 5970 4759 6 1244 4789 97 0 6 chrX 86482926 86483634 -80166662 + L1_Mus2 LINE L1 5906 6566 0 6 1244 9238 190 22 66 chrX 86483677 86485269 -80165027 + L1Md_F2 LINE L1 3270 4795 -1088 6 1244 3986 50 20 0 chrX 86485269 86485764 -80164532 + L1Md_F3 LINE L1 6066 6570 -14 6 1244 9238 186 19 69 chrX 86485764 86486283 -80164013 + L1Md_F2 LINE L1 4796 5279 -604 6 1244 1536 32 22 0 chrX 86486283 86486468 -80163828 + B2_Mm1a SINE B2 2 190 -3 6 1244 9238 186 19 69 chrX 86486468 86486786 -80163510 + L1Md_F2 LINE L1 5280 5585 -298 6 1244 7770 53 16 0 chrX 86486787 86487764 -80162532 + L1Md_F2 LINE L1 5587 6579 -3 6 1244 5189 186 39 57 chrX 86487764 86489180 -80161116 + Lx6 LINE L1 4570 5966 -1494 6 1244 809 324 118 19 chrX 86489185 86489781 -80160515 + Lx6 LINE L1 6073 6727 -733 6 1244 376 228 97 52 chrX 86489848 86489982 -80160314 - MLT1E3 LTR MaLR -477 147 8 6 1244 313 299 35 53 chrX 86490009 86490122 -80160174 + L1M5 LINE L1 5645 5755 -485 6 1244 3353 265 89 25 chrX 86490270 86491534 -80158762 - Lx2B LINE L1 -8 6992 5648 6 1244 15169 191 63 24 chrX 86491528 86493417 -80156879 - Lx2B LINE L1 -491 5386 3483 6 1244 228 35 0 0 chrX 86493417 86493446 -80156850 + (TTG)n Simple_repeat Simple_repeat 1 29 0 6 1244 15169 191 63 24 chrX 86493446 86495457 -80154839 - Lx2B LINE L1 -2395 3482 1337 6 1244 773 293 106 38 chrX 86495570 86495911 -80154385 + RMER13A LTR ERVK 98 461 -399 6 1244 955 281 51 39 chrX 86496167 86496478 -80153818 + ORR1D2 LTR MaLR 1 315 -55 6 1244 619 296 37 9 chrX 86496670 86496885 -80153411 - Lx8 LINE L1 -479 6994 6774 6 1244 2434 114 33 2 chrX 86496892 86497287 -80153009 + L1_Mur1 LINE L1 5286 5692 -194 6 1244 323 278 209 0 chrX 86497753 86497868 -80152428 + B1_Mur4 SINE Alu 2 140 -10 6 1244 267 79 0 0 chrX 86497868 86497906 -80152390 + (CAA)n Simple_repeat Simple_repeat 2 39 0 6 1244 354 296 11 0 chrX 86498130 86498218 -80152078 - RSINE1 SINE B4 -66 99 11 6 1244 2152 87 7 0 chrX 86498270 86498568 -80151728 + L1_Mus3 LINE L1 6339 6638 0 6 1244 21 0 0 0 chrX 86498706 86498727 -80151569 + AT_rich Low_complexity Low_complexity 1 21 0 6 1244 216 359 51 0 chrX 86498876 86498954 -80151342 + ID4_ SINE ID 2 83 0 6 1244 1099 203 79 63 chrX 86499747 86499999 -80150297 - MTC LTR MaLR 0 421 166 6 1244 698 200 82 51 chrX 86500000 86500158 -80150138 - MTC LTR MaLR -257 164 2 1 1244 22 80 0 0 chrX 86500322 86500372 -80149924 + AT_rich Low_complexity Low_complexity 1 50 0 2 1244 193 243 0 0 chrX 86500648 86500685 -80149611 - L2 LINE L2 -694 2725 2689 3 1244 386 345 78 58 chrX 86500792 86501087 -80149209 - MLT1F LTR MaLR -23 525 225 4 1244 212 254 0 33 chrX 86501228 86501289 -80149007 - L2 LINE L2 -1064 2355 2297 3 1244 594 359 48 45 chrX 86501653 86501988 -80148308 - LTR33A_ LTR ERVL -32 499 164 5 1244 1097 101 0 0 chrX 86502175 86502323 -80147973 + B1_Mus1 SINE Alu 1 148 0 6 1244 256 119 29 15 chrX 86502328 86502396 -80147900 + A-rich Low_complexity Low_complexity 4 72 0 7 1244 23 0 0 0 chrX 86502457 86502480 -80147816 + AT_rich Low_complexity Low_complexity 1 23 0 8 1244 592 312 91 5 chrX 86503609 86503818 -80146478 - MTD-int LTR MaLR -1351 229 3 9 1244 1154 273 87 26 chrX 86503821 86504198 -80146098 - MTD LTR MaLR -20 399 1 9 1244 240 269 0 19 chrX 86504957 86505010 -80145286 - ID4_ SINE ID -15 68 17 1 1244 684 270 61 64 chrX 86505164 86505477 -80144819 - L1MA9 LINE L1 -289 6023 5712 1 1244 273 258 21 0 chrX 86505618 86505715 -80144581 - Lx9 LINE L1 -157 7487 7389 1 1244 721 270 23 67 chrX 86505783 86506031 -80144265 - Lx9 LINE L1 -384 7260 6891 1 1244 561 300 73 18 chrX 86506057 86506418 -80143878 - L1MA9 LINE L1 -623 5689 5308 1 1244 563 309 0 38 chrX 86506436 86506594 -80143702 + RSINE1 SINE B4 8 159 -6 1 1244 360 43 0 0 chrX 86506626 86506672 -80143624 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1244 638 321 60 31 chrX 86506688 86507276 -80143020 + L1M2 LINE L1 4659 5263 -880 1 1244 21 57 0 0 chrX 86507307 86507342 -80142954 + AT_rich Low_complexity Low_complexity 1 35 0 1 155 3502 194 26 18 chrX 86507389 86508128 -80142168 + Lx7 LINE L1 5082 5828 -52 1 1245 1855 126 26 91 chrX 86508128 86508478 -80141818 - ORR1A2 LTR MaLR 0 327 1 1 1245 3502 209 33 22 chrX 86508478 86508651 -80141645 + Lx7 LINE L1 5829 6005 -1691 1 1245 450 0 0 0 chrX 86508663 86508713 -80141583 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1245 3632 250 72 13 chrX 86508713 86509634 -80140662 + Lx7 LINE L1 6204 7178 -518 1 1245 663 308 142 55 chrX 86509759 86510279 -80140017 - RMER13A LTR ERVK -227 681 100 2 1245 457 189 137 0 chrX 86510385 86510480 -80139816 + Lx7 LINE L1 7177 7284 -412 1 1245 226 279 62 9 chrX 86511030 86511142 -80139154 + Lx7 LINE L1 7559 7676 -20 1 1245 363 300 117 9 chrX 86511175 86511286 -80139010 + B3A SINE B2 26 148 -50 2 1245 522 67 0 0 chrX 86511313 86511388 -80138908 + (CA)n Simple_repeat Simple_repeat 1 75 0 2 1245 8852 43 2 2 chrX 86511402 86513204 -80137092 - L1Md_F2 LINE L1 -2 6580 4779 2 1245 675 126 9 0 chrX 86513204 86513315 -80136981 + L1_Mm LINE L1 2728 2839 -3044 2 1245 628 266 82 20 chrX 86513374 86513570 -80136726 + B3 SINE B2 2 209 -7 2 1245 2208 147 14 6 chrX 86513622 86513985 -80136311 - L1_Mus4 LINE L1 -43 6593 6228 2 1245 1993 145 38 55 chrX 86513973 86514338 -80135958 + L1_Mm LINE L1 5464 5822 -61 2 1245 328 288 27 14 chrX 86514374 86514522 -80135774 + L1MC4a LINE L1 7480 7629 -253 2 1245 589 257 75 19 chrX 86514541 86514734 -80135562 - B3 SINE B2 -3 192 1 2 1245 327 308 39 0 chrX 86514792 86514948 -80135348 + L1MC4a LINE L1 7708 7869 -13 2 1245 37 49 0 36 chrX 86515727 86515811 -80134485 + AT_rich Low_complexity Low_complexity 1 81 0 3 1245 21 0 0 0 chrX 86515925 86515946 -80134350 + AT_rich Low_complexity Low_complexity 1 21 0 3 1245 2076 246 32 14 chrX 86516252 86516758 -80133538 + Lx7 LINE L1 300 814 -6914 3 1245 869 246 55 11 chrX 86516754 86517025 -80133271 + Lx7 LINE L1 6000 6282 -1414 3 1245 821 250 104 0 chrX 86517027 86517239 -80133057 + Lx6 LINE L1 6426 6659 -801 3 1245 2590 239 63 89 chrX 86517262 86518230 -80132066 + Lx7 LINE L1 6754 7696 0 3 1245 3881 151 11 8 chrX 86518313 86518968 -80131328 + Lx2 LINE L1 6340 6996 -1 3 1245 387 0 0 0 chrX 86518972 86519015 -80131281 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 3 1245 341 267 11 55 chrX 86519035 86519126 -80131170 + PB1D10 SINE Alu 23 109 -8 3 1245 330 26 0 0 chrX 86519131 86519170 -80131126 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1245 474 147 37 0 chrX 86519797 86519906 -80130390 + CT-rich Low_complexity Low_complexity 2 114 0 3 1245 4781 65 3 6 chrX 86520323 86520946 -80129350 + L1_Mus2 LINE L1 5946 6566 0 3 1245 345 393 37 0 chrX 86520959 86521094 -80129202 + B3A SINE B2 27 166 -32 4 1245 310 370 14 0 chrX 86521202 86521340 -80128956 + B1F SINE Alu 5 144 -5 4 1245 2174 141 3 9 chrX 86521728 86522072 -80128224 + Lx LINE L1 6306 6647 -7 4 1245 28 71 0 0 chrX 86522289 86522345 -80127951 + AT_rich Low_complexity Low_complexity 1 56 0 4 1245 534 31 0 0 chrX 86522547 86522611 -80127685 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 4 1245 602 224 67 13 chrX 86522623 86522772 -80127524 - B3A SINE B2 -24 174 18 4 1245 908 168 104 43 chrX 86523903 86524114 -80126182 + L1_Mur2 LINE L1 4825 5048 -829 4 1245 420 214 80 0 chrX 86524110 86524222 -80126074 + Lx4A LINE L1 6929 7049 -9 4 1245 553 279 170 51 chrX 86524365 86524701 -80125595 - MTD LTR MaLR -26 393 18 4 1245 357 317 65 35 chrX 86525027 86525197 -80125099 + B3A SINE B2 9 183 -15 4 1245 624 27 0 0 chrX 86525214 86525288 -80125008 + (TAGA)n Simple_repeat Simple_repeat 1 74 0 5 1245 512 231 0 6 chrX 86525718 86525875 -80124421 + CT-rich Low_complexity Low_complexity 2 157 0 5 1245 439 250 28 27 chrX 86529427 86529559 -80120737 - MTC LTR MaLR -276 131 13 5 1245 672 232 0 0 chrX 86530193 86530335 -80119961 + Lx6 LINE L1 7312 7453 -7 5 1245 274 248 8 53 chrX 86530346 86530478 -80119818 - L1M5 LINE L1 -2156 3990 3865 5 1245 297 0 0 0 chrX 86530637 86530670 -80119626 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 1245 492 292 35 8 chrX 86530684 86530846 -80119450 - B3A SINE B2 -46 170 6 5 1245 290 348 20 5 chrX 86531194 86531393 -80118903 + L1MD1 LINE L1 1764 1965 -4277 5 1245 363 376 31 57 chrX 86531551 86531807 -80118489 + B4A SINE B4 7 254 -38 5 1245 1083 91 0 0 chrX 86531808 86531951 -80118345 + B1_Mm SINE Alu 5 147 0 5 1245 22 56 0 0 chrX 86532038 86532074 -80118222 + AT_rich Low_complexity Low_complexity 1 36 0 6 1245 454 333 0 8 chrX 86532098 86532222 -80118074 + B3A SINE B2 3 125 -73 6 1245 14043 150 9 13 chrX 86532222 86534697 -80115599 + L1_Mm LINE L1 3249 5712 -171 6 1245 309 344 44 19 chrX 86534698 86534858 -80115438 + L1MD1 LINE L1 4895 5058 -1088 5 1245 356 194 15 0 chrX 86534858 86534925 -80115371 + ID4 SINE ID 2 69 -14 6 1245 320 298 84 22 chrX 86534993 86535329 -80114967 + L1MD1 LINE L1 5075 5429 -750 5 1245 370 284 118 39 chrX 86535499 86535831 -80114465 + L1MD1 LINE L1 5758 6111 -68 5 1245 958 298 70 43 chrX 86535937 86536421 -80113875 - Lx9 LINE L1 -4 7640 7144 6 1245 559 377 6 0 chrX 86536523 86536690 -80113606 - B3A SINE B2 -29 169 2 6 1245 727 342 13 19 chrX 86536921 86537228 -80113068 + L1MCb LINE L1 102 406 -5639 6 1245 432 337 66 26 chrX 86537461 86537887 -80112409 + L1MCb LINE L1 578 1020 -5025 6 1245 317 284 0 90 chrX 86538123 86538212 -80112084 + ID SINE ID 8 88 -204 6 1245 505 316 84 34 chrX 86538610 86538872 -80111424 + MLT1C LTR MaLR 191 465 -2 6 1245 356 237 25 8 chrX 86538882 86539001 -80111295 + L1MC LINE L1 5314 5434 -910 6 1245 397 340 18 36 chrX 86539388 86539553 -80110743 + RSINE1 SINE B4 4 165 0 7 1245 287 318 57 64 chrX 86540419 86540560 -80109736 - B1F1 SINE Alu -1 148 9 7 1245 445 252 24 2 chrX 86541520 86541637 -80108659 - PB1D9 SINE Alu -22 127 3 7 1245 311 330 22 11 chrX 86541556 86541648 -80108648 - B4A SINE B4 -123 169 77 7 1245 693 126 0 0 chrX 86541706 86541817 -80108479 + (TA)n Simple_repeat Simple_repeat 1 111 0 7 1245 899 268 19 0 chrX 86542186 86542391 -80107905 - B3 SINE B2 -6 210 2 7 1245 441 0 0 0 chrX 86542538 86542587 -80107709 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1245 364 274 46 19 chrX 86542622 86542730 -80107566 + B1F SINE Alu 1 111 -38 7 1245 227 290 42 61 chrX 86542626 86542791 -80107505 - YREP_Mm Unknown Unknown -1500 312 151 7 1245 450 36 0 0 chrX 86543168 86543224 -80107072 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1245 387 293 0 0 chrX 86543224 86543306 -80106990 + MLT1A0 LTR MaLR 221 302 -63 8 1245 353 295 148 0 chrX 86543339 86543461 -80106835 + MLT1A LTR MaLR 186 325 -49 8 1245 4069 94 24 3 chrX 86544695 86545283 -80105013 + L1_Mus1 LINE L1 5967 6566 -1 8 1245 423 0 0 0 chrX 86545325 86545372 -80104924 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 8 1245 2168 90 60 17 chrX 86545599 86545951 -80104345 + IAPLTR1_Mm LTR ERVK 1 367 0 8 1245 55000 29 9 2 chrX 86545951 86552378 -80097918 + IAPEz-int LTR ERVK 8 6479 -2 8 1245 2168 90 60 17 chrX 86552380 86552732 -80097564 + IAPLTR1_Mm LTR ERVK 1 367 0 8 1245 1078 89 7 0 chrX 86553242 86553388 -80096908 - B1_Mus1 SINE Alu 0 148 2 8 1245 469 306 27 34 chrX 86554518 86554667 -80095629 - B1F1 SINE Alu 0 149 2 8 1245 34 0 0 0 chrX 86554867 86554901 -80095395 + AT_rich Low_complexity Low_complexity 1 34 0 8 1245 1787 188 30 22 chrX 86555024 86555388 -80094908 + ORR1B2 LTR MaLR 1 367 0 8 1245 342 0 0 0 chrX 86556831 86556869 -80093427 + (TA)n Simple_repeat Simple_repeat 1 38 0 8 1245 34632 78 1 14 chrX 86556870 86563027 -80087269 - L1Md_F2 LINE L1 -21 6561 489 9 1245 1409 251 47 11 chrX 86563440 86563602 -80086694 + ORR1D1 LTR MaLR 1 164 -210 9 1245 966 103 0 0 chrX 86563602 86563747 -80086549 + (TC)n Simple_repeat Simple_repeat 2 146 0 9 1245 1409 251 47 11 chrX 86563747 86563941 -80086355 + ORR1D1 LTR MaLR 165 368 -6 9 1245 4542 243 55 71 chrX 86563941 86564069 -80086227 + ORR1D1-int LTR MaLR 1 109 -1261 9 1245 987 122 0 26 chrX 86564069 86564221 -80086075 - B1_Mus1 SINE Alu 0 148 1 9 1245 4542 244 55 70 chrX 86564221 86565527 -80084769 + ORR1D1-int LTR MaLR 110 1579 -1 9 1245 251 125 0 0 chrX 86565518 86565558 -80084738 + B2_Mm2 SINE B2 2 41 -154 9 1245 236 0 0 0 chrX 86565558 86565584 -80084712 - L1_Mur1 LINE L1 -376 5510 5485 9 1245 403 93 0 0 chrX 86565673 86565727 -80084569 + L1Md_F2 LINE L1 5533 5586 -297 9 1245 8210 35 4 6 chrX 86565728 86566725 -80083571 + L1Md_F2 LINE L1 5588 6582 0 9 1245 491 172 103 0 chrX 86566730 86566817 -80083479 + B2_Mm1t SINE B2 35 130 -63 9 1245 1045 272 66 44 chrX 86566818 86567137 -80083159 + ORR1D1 LTR MaLR 46 371 -3 9 1245 1180 301 21 43 chrX 86568177 86568597 -80081699 - MTD LTR MaLR -8 411 1 9 1245 238 250 0 95 chrX 86568623 86568707 -80081589 - B4 SINE B4 0 292 217 9 1245 3817 132 22 0 chrX 86568733 86569367 -80080929 - L1_Mur2 LINE L1 -1051 4826 4179 1 1245 1190 159 4 26 chrX 86569367 86569593 -80080703 + Lx4A LINE L1 6838 7058 0 1 1245 3947 89 4 0 chrX 86569923 86570460 -80079836 + L1_Mus1 LINE L1 6029 6567 0 1 1245 632 155 17 8 chrX 86570682 86570799 -80079497 - Lx2B LINE L1 -567 6433 6316 1 1245 882 231 81 8 chrX 86570803 86571039 -80079257 + Lx2B LINE L1 6721 6973 -27 1 1245 436 328 71 16 chrX 86571040 86571223 -80079073 - MTE2b LTR MaLR -26 353 161 1 1245 410 276 291 0 chrX 86571307 86571441 -80078855 - B4 SINE B4 -114 178 6 9 1245 1141 186 17 4 chrX 86571539 86571777 -80078519 + L1Md_F LINE L1 166 406 -6113 1 1245 25175 23 0 0 chrX 86571775 86574743 -80075553 + L1Md_A LINE L1 2619 5586 -297 1 1245 8446 31 0 0 chrX 86574744 86575736 -80074560 + L1Md_A LINE L1 5588 6579 -3 1 1245 414 0 0 0 chrX 86575787 86575833 -80074463 + (TAAAA)n Simple_repeat Simple_repeat 3 48 0 1 1245 292 319 92 40 chrX 86576263 86576436 -80073860 + RMER4A LTR ERVK 5 186 -280 1 1245 1318 277 74 11 chrX 86577137 86577516 -80072780 + MTD LTR MaLR 16 418 -1 1 1245 285 279 30 96 chrX 86577544 86577679 -80072617 + MLT1E2 LTR MaLR 87 212 -415 1 1245 511 331 0 0 chrX 86577816 86577943 -80072353 - B1F SINE Alu -20 129 3 1 1245 439 260 0 93 chrX 86578492 86578632 -80071664 - B1_Mur1 SINE Alu -1 148 22 1 1245 180 0 0 0 chrX 86578843 86578863 -80071433 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 1245 465 19 0 0 chrX 86579047 86579101 -80071195 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 1245 639 272 62 48 chrX 86579114 86579374 -80070922 + L1MC1 LINE L1 6025 6297 -36 1 1245 886 210 102 0 chrX 86579374 86579579 -80070717 - URR1A DNA MER1_type 0 226 1 1 1245 639 272 62 48 chrX 86579579 86579608 -80070688 + L1MC1 LINE L1 6298 6318 -15 1 1245 277 344 115 0 chrX 86583407 86583529 -80066767 - ID_B1 SINE B4 -3 221 86 1 1245 283 294 34 74 chrX 86583599 86583775 -80066521 - Lx7 LINE L1 -17 7679 7511 1 1245 243 0 0 0 chrX 86583777 86583804 -80066492 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 1245 258 299 24 83 chrX 86583869 86583933 -80066363 - ID4_ SINE ID -2 81 22 1 1245 2994 55 35 0 chrX 86583933 86584330 -80065966 + RLTR10A LTR ERVK 1 411 0 1 1245 258 299 24 83 chrX 86584330 86584349 -80065947 - ID4_ SINE ID -62 21 3 1 1245 664 339 56 24 chrX 86584527 86584992 -80065304 - Lx8 LINE L1 -5 7468 6989 1 1245 688 266 108 66 chrX 86585160 86585376 -80064920 - L1M3f LINE L1 -768 5557 5314 1 1245 4776 119 11 17 chrX 86585376 86586134 -80064162 - Lx3_Mus LINE L1 0 7009 6257 1 1245 688 268 108 66 chrX 86586134 86586583 -80063713 - L1M3f LINE L1 -1012 5313 4858 1 1245 483 286 57 26 chrX 86586780 86587137 -80063159 - L1M3f LINE L1 -4610 1649 942 1 1245 439 314 63 11 chrX 86587444 86587634 -80062662 - B3 SINE B2 -15 201 2 1 1245 21 0 0 0 chrX 86588047 86588068 -80062228 + AT_rich Low_complexity Low_complexity 1 21 0 1 1245 708 279 14 29 chrX 86588074 86588284 -80062012 - B3 SINE B2 -5 211 5 1 1245 1651 205 62 3 chrX 86589137 86589494 -80060802 + ORR1C1 LTR MaLR 1 378 0 1 1245 253 0 0 51 chrX 86590070 86590109 -80060187 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 1 1245 3993 145 8 5 chrX 86590197 86590847 -80059449 - Lx2A1 LINE L1 0 7008 6357 1 1245 1086 146 6 0 chrX 86590847 86591018 -80059278 + Lx2A1 LINE L1 6187 6358 -650 1 1245 464 119 0 0 chrX 86591079 86591146 -80059150 + B1_Mus2 SINE Alu 75 141 -6 1 1245 720 0 0 0 chrX 86591151 86591231 -80059065 + (TTC)n Simple_repeat Simple_repeat 1 80 0 1 1245 21 36 0 0 chrX 86591280 86591308 -80058988 + AT_rich Low_complexity Low_complexity 1 28 0 1 1245 1186 295 83 60 chrX 86591599 86591754 -80058542 - Lx8 LINE L1 -4 7469 7302 1 1245 396 0 0 0 chrX 86591754 86591798 -80058498 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1245 1186 295 83 60 chrX 86591798 86592277 -80058019 - Lx8 LINE L1 -172 7301 6820 1 1245 1639 109 8 4 chrX 86592494 86592742 -80057554 - L1_Mus3 LINE L1 -3 6635 6387 1 1245 287 341 0 0 chrX 86593092 86593177 -80057119 - PB1D10 SINE Alu -21 96 12 1 1245 28 0 0 0 chrX 86593622 86593650 -80056646 + AT_rich Low_complexity Low_complexity 1 28 0 1 1245 26 0 0 0 chrX 86593790 86593816 -80056480 + AT_rich Low_complexity Low_complexity 1 26 0 1 1245 2792 247 53 78 chrX 86594116 86594969 -80055327 + Lx6 LINE L1 6615 7445 -15 1 1245 23 33 0 0 chrX 86595137 86595167 -80055129 + AT_rich Low_complexity Low_complexity 1 30 0 1 1245 772 367 46 14 chrX 86595421 86595838 -80054458 - LTR40b LTR ERVL -25 437 8 1 1245 1245 283 25 28 chrX 86596305 86596629 -80053667 + MTD LTR MaLR 97 419 0 1 1245 277 285 130 8 chrX 86596994 86597125 -80053171 - MER68 LTR ERVL -335 228 82 1 1245 4356 14 0 0 chrX 86597145 86597638 -80052658 - L1Md_A LINE L1 0 6582 6090 1 1245 24 0 0 0 chrX 86597793 86597817 -80052479 + AT_rich Low_complexity Low_complexity 1 24 0 1 1245 26 30 0 0 chrX 86598267 86598300 -80051996 + AT_rich Low_complexity Low_complexity 1 33 0 1 1245 24 0 0 0 chrX 86598318 86598342 -80051954 + AT_rich Low_complexity Low_complexity 1 24 0 1 1245 945 246 114 22 chrX 86599302 86599437 -80050859 - Lx9 LINE L1 0 7644 7507 1 1245 315 0 0 0 chrX 86599437 86599472 -80050824 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1245 945 246 114 22 chrX 86599472 86599697 -80050599 - Lx9 LINE L1 -138 7506 7252 1 1245 222 37 0 0 chrX 86600541 86600568 -80049728 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 1245 2423 158 9 2 chrX 86600669 86601089 -80049207 - Lx2 LINE L1 -2 6995 6573 1 1245 34 84 0 0 chrX 86601310 86601393 -80048903 + AT_rich Low_complexity Low_complexity 1 83 0 1 1245 1468 287 101 18 chrX 86601484 86602141 -80048155 + Lx6 LINE L1 6657 7434 -26 1 1245 645 293 25 15 chrX 86602179 86602380 -80047916 + B3 SINE B2 2 204 -12 1 1245 284 265 61 10 chrX 86602571 86602670 -80047626 - B1F SINE Alu -5 144 41 1 1245 29667 103 8 23 chrX 86602778 86608054 -80042242 + L1Md_F2 LINE L1 388 5585 -298 1 1245 6990 102 4 1 chrX 86608055 86609048 -80041248 + L1Md_F2 LINE L1 5587 6582 0 1 1245 228 271 8 47 chrX 86609258 86609386 -80040910 - L1ME3A LINE L1 -7 6166 6044 1 1245 6668 124 34 5 chrX 86609534 86610737 -80039559 + Lx LINE L1 5418 6654 0 1 1245 431 379 12 6 chrX 86610746 86610908 -80039388 + B4 SINE B4 124 286 -6 1 1245 387 0 0 0 chrX 86610911 86610954 -80039342 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 1 1245 603 27 0 0 chrX 86611032 86611105 -80039191 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 1245 1134 161 11 0 chrX 86611579 86611765 -80038531 + Lx2A1 LINE L1 6173 6360 -648 1 1245 304 103 0 161 chrX 86611779 86611860 -80038436 + Lx2 LINE L1 6345 6412 -585 1 1245 769 155 75 0 chrX 86611865 86612026 -80038270 + Lx2A1 LINE L1 6833 7005 -3 1 1245 514 264 131 25 chrX 86612035 86612280 -80038016 + Tigger7 DNA MER2_type 334 604 -1887 1 1245 297 75 0 0 chrX 86612960 86613000 -80037296 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1245 257 158 64 28 chrX 86613039 86613099 -80037197 - B3A SINE B2 -159 57 1 1 1245 3961 112 47 0 chrX 86613315 86614255 -80036041 + L1Md_F LINE L1 534 1527 -4356 1 1245 849 142 0 25 chrX 86614255 86614414 -80035882 + L1Md_F2 LINE L1 6425 6579 -3 1 1245 23 0 0 0 chrX 86614416 86614439 -80035857 + AT_rich Low_complexity Low_complexity 1 23 0 1 1245 423 0 0 0 chrX 86614507 86614554 -80035742 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1245 437 325 25 0 chrX 86614582 86614702 -80035594 + B1F1 SINE Alu 13 135 -14 1 1245 234 0 0 0 chrX 86614706 86614732 -80035564 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 1245 257 333 34 34 chrX 86615284 86615430 -80034866 + ID_B1 SINE B4 79 224 0 1 1245 1998 78 4 0 chrX 86615639 86615910 -80034386 - Lx LINE L1 -698 5938 5667 1 1245 4428 128 21 14 chrX 86615910 86616629 -80033667 + Lx LINE L1 5931 6654 0 1 1245 45 19 0 0 chrX 86616711 86616763 -80033533 + AT_rich Low_complexity Low_complexity 1 52 0 1 1245 26 0 0 0 chrX 86617476 86617502 -80032794 + AT_rich Low_complexity Low_complexity 1 26 0 1 1245 483 18 0 0 chrX 86617850 86617906 -80032390 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 1245 434 253 75 6 chrX 86618279 86618476 -80031820 + L1M1 LINE L1 5590 5813 -487 1 1245 4469 78 3 0 chrX 86618465 86619114 -80031182 - L1_Mus2 LINE L1 -387 6179 5529 1 1245 1043 136 33 0 chrX 86619124 86619308 -80030988 - L1_Mur1 LINE L1 -1733 4153 3964 1 1245 1202 110 40 5 chrX 86619308 86619509 -80030787 + Lx3_Mus LINE L1 6794 7001 -8 1 1245 504 340 33 19 chrX 86619548 86619758 -80030538 + Lx7 LINE L1 6966 7178 -518 1 1245 2572 56 3 6 chrX 86619785 86620124 -80030172 + ORR1A1 LTR MaLR 1 338 -8 1 1245 316 214 30 15 chrX 86620273 86620406 -80029890 + CT-rich Low_complexity Low_complexity 3 137 0 1 1245 244 204 90 11 chrX 86620439 86620528 -80029768 + Lx7 LINE L1 7601 7696 0 1 1245 21 0 0 0 chrX 86620764 86620785 -80029511 + AT_rich Low_complexity Low_complexity 1 21 0 1 1245 22 35 0 0 chrX 86620841 86620870 -80029426 + AT_rich Low_complexity Low_complexity 1 29 0 1 1245 1322 208 126 29 chrX 86621061 86621402 -80028894 + ORR1D1 LTR MaLR 1 374 0 1 1245 22 0 0 0 chrX 86621802 86621824 -80028472 + AT_rich Low_complexity Low_complexity 1 22 0 1 1245 4674 119 12 26 chrX 86622803 86623564 -80026732 + Lx LINE L1 5897 6646 -8 1 1245 447 19 0 0 chrX 86623588 86623640 -80026656 + (GGGAA)n Simple_repeat Simple_repeat 2 53 0 1 1245 372 22 0 0 chrX 86623647 86623692 -80026604 + (GAAA)n Simple_repeat Simple_repeat 1 45 0 1 1245 24 0 0 0 chrX 86624142 86624166 -80026130 + AT_rich Low_complexity Low_complexity 1 24 0 1 1245 324 263 45 41 chrX 86624421 86624562 -80025734 - MIR SINE MIR -1 267 125 1 1245 22 0 0 0 chrX 86625152 86625174 -80025122 + AT_rich Low_complexity Low_complexity 1 22 0 1 1245 830 184 85 0 chrX 86626159 86626360 -80023936 + Lx9 LINE L1 7425 7642 -2 1 1245 335 312 146 15 chrX 86626396 86626526 -80023770 + RSINE1 SINE B4 11 157 -8 1 1245 21 0 0 0 chrX 86626779 86626800 -80023496 + AT_rich Low_complexity Low_complexity 1 21 0 2 1245 359 354 19 71 chrX 86626815 86626951 -80023345 + RSINE1 SINE B4 12 141 -24 2 1245 312 27 0 0 chrX 86626951 86626988 -80023308 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1245 359 354 19 71 chrX 86626988 86627006 -80023290 + RSINE1 SINE B4 142 158 -7 2 1245 345 47 0 0 chrX 86627022 86627065 -80023231 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1245 4238 182 37 20 chrX 86627280 86628126 -80022170 - RMER13B LTR ERVK -48 860 1 2 1245 234 352 82 7 chrX 86628824 86628970 -80021326 + Kanga11a DNA Tc2 82 238 -732 2 1245 33 0 0 0 chrX 86629282 86629315 -80020981 + AT_rich Low_complexity Low_complexity 1 33 0 2 1245 4219 28 2 0 chrX 86629315 86629808 -80020488 - L1Md_T LINE L1 -3 6579 6086 2 1245 4248 22 0 0 chrX 86629808 86630434 -80019862 + L1Md_T LINE L1 5461 6086 -496 2 1245 29 0 0 0 chrX 86631161 86631190 -80019106 + AT_rich Low_complexity Low_complexity 1 29 0 2 1245 254 208 0 27 chrX 86631225 86631299 -80018997 + (CATATA)n Simple_repeat Simple_repeat 6 77 0 2 1245 21 36 0 0 chrX 86632077 86632105 -80018191 + AT_rich Low_complexity Low_complexity 1 28 0 2 1245 1215 196 4 0 chrX 86632330 86632555 -80017741 + URR1A DNA MER1_type 1 226 0 2 1245 260 374 100 6 chrX 86632810 86632965 -80017331 - MLT1J1 LTR MaLR -239 209 38 2 1245 368 222 0 0 chrX 86633059 86633122 -80017174 + B3 SINE B2 53 115 -101 2 1245 372 43 0 0 chrX 86633129 86633175 -80017121 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1245 312 296 133 23 chrX 86633474 86633602 -80016694 - RSINE1 SINE B4 -19 146 5 2 1245 476 252 0 0 chrX 86633724 86633823 -80016473 - ID_B1 SINE B4 -5 219 121 2 1245 252 342 66 40 chrX 86633908 86634060 -80016236 + RLTR42 LTR ERVK 62 217 -22 2 1245 1789 274 44 72 chrX 86634165 86634959 -80015337 + RLTR42-int LTR ERVK 92 863 -4659 2 1245 704 230 40 108 chrX 86634969 86635247 -80015049 - RLTR22_Mur LTR ERVK 0 1848 1590 2 1245 1208 225 153 40 chrX 86635325 86635775 -80014521 - RLTR22_Mur LTR ERVK -844 1004 504 2 1245 261 0 0 0 chrX 86635784 86635813 -80014483 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1245 1105 75 0 0 chrX 86635813 86635960 -80014336 - B1_Mus1 SINE Alu 0 148 2 2 1245 2477 180 26 14 chrX 86635965 86636461 -80013835 - RLTR22_Mur LTR ERVK -1342 506 5 2 1245 267 247 0 0 chrX 86636581 86636654 -80013642 + RLTR42-int LTR ERVK 958 1030 -4492 2 1245 940 205 144 39 chrX 86636759 86636964 -80013332 + RLTR42-int LTR ERVK 1087 1330 -4192 2 1245 188 35 35 0 chrX 86636964 86636993 -80013303 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 1245 940 205 144 39 chrX 86636993 86637071 -80013225 + RLTR42-int LTR ERVK 1331 1400 -4122 2 1245 3506 213 15 49 chrX 86637113 86637914 -80012382 + RLTR42-int LTR ERVK 4483 5256 -266 2 1245 245 216 0 0 chrX 86637933 86637984 -80012312 + Lx4B LINE L1 7001 7051 -7 2 1245 516 45 0 0 chrX 86637986 86638053 -80012243 + (CATA)n Simple_repeat Simple_repeat 2 68 0 2 1245 602 301 20 0 chrX 86638142 86638288 -80012008 + B1_Mur2 SINE Alu 1 149 0 2 1245 349 214 363 19 chrX 86638433 86638590 -80011706 + B3 SINE B2 2 212 -4 2 1246 268 349 0 0 chrX 86638741 86638824 -80011472 + (CA)n Simple_repeat Simple_repeat 2 84 0 2 1246 380 291 86 26 chrX 86638973 86639125 -80011171 + L1M3e LINE L1 63 223 -6807 2 1246 360 119 0 0 chrX 86639760 86639819 -80010477 + (TAAA)n Simple_repeat Simple_repeat 1 59 0 2 1246 233 264 0 14 chrX 86640096 86640169 -80010127 + L1ME3 LINE L1 5902 5973 -189 2 1246 470 323 65 12 chrX 86640533 86640702 -80009594 - B4 SINE B4 -113 179 2 2 1246 743 253 40 5 chrX 86640838 86641037 -80009259 - B3 SINE B2 -9 207 2 2 1246 1050 220 0 36 chrX 86641431 86641653 -80008643 + B3 SINE B2 3 216 0 2 1246 377 337 0 10 chrX 86641679 86641778 -80008518 + RSINE1 SINE B4 31 128 -37 2 1246 2097 101 13 6 chrX 86641977 86642295 -80008001 + L1_Mus3 LINE L1 6312 6631 -7 2 1246 705 106 0 0 chrX 86642300 86642404 -80007892 + (GGAA)n Simple_repeat Simple_repeat 4 107 0 2 1246 2165 237 55 8 chrX 86642817 86643331 -80006965 + Lx3C LINE L1 6436 6973 -3 2 1246 2284 31 28 0 chrX 86644001 86644290 -80006006 - L1Md_F3 LINE L1 -14 6570 6274 2 1246 1709 24 5 0 chrX 86644581 86644788 -80005508 + L1Md_A LINE L1 6374 6581 -1 2 1246 387 313 79 43 chrX 86645117 86645394 -80004902 - B4A SINE B4 -4 288 2 2 1246 227 242 15 29 chrX 86645421 86645489 -80004807 - B1F SINE Alu 0 149 83 2 1246 198 0 0 0 chrX 86645886 86645908 -80004388 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2 1246 781 269 20 35 chrX 86645909 86646109 -80004187 - B3 SINE B2 -19 197 1 2 1246 343 373 152 48 chrX 86646147 86646457 -80003839 - MLT2F LTR ERVL -129 534 193 2 1246 526 326 52 29 chrX 86646830 86647102 -80003194 - B4A SINE B4 -14 278 1 2 1246 757 257 32 51 chrX 86647623 86647840 -80002456 - B3 SINE B2 -1 215 3 2 1246 4443 206 32 24 chrX 86648253 86649145 -80001151 + RMER13B LTR ERVK 4 903 -5 2 1246 198 103 0 0 chrX 86649189 86649218 -80001078 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 2 1246 226 245 0 0 chrX 86651572 86651625 -79998671 + (CAT)n Simple_repeat Simple_repeat 2 54 0 2 1246 213 186 34 0 chrX 86652496 86652555 -79997741 + A-rich Low_complexity Low_complexity 1 61 0 2 1246 204 97 0 0 chrX 86652675 86652706 -79997590 + (TTTTC)n Simple_repeat Simple_repeat 5 35 0 2 1246 217 154 0 25 chrX 86652939 86652979 -79997317 + CT-rich Low_complexity Low_complexity 2 40 0 2 1246 284 98 11 58 chrX 86653051 86653138 -79997158 + A-rich Low_complexity Low_complexity 1 83 0 2 1246 297 39 59 0 chrX 86653661 86653712 -79996584 + (CAA)n Simple_repeat Simple_repeat 1 54 0 2 1246 217 154 0 25 chrX 86653848 86653888 -79996408 + CT-rich Low_complexity Low_complexity 2 40 0 2 1246 230 138 0 44 chrX 86653961 86654029 -79996267 + A-rich Low_complexity Low_complexity 1 65 0 2 1246 217 154 0 25 chrX 86654422 86654462 -79995834 + CT-rich Low_complexity Low_complexity 2 40 0 2 1246 270 0 0 0 chrX 86654928 86654958 -79995338 + (TTTTC)n Simple_repeat Simple_repeat 5 34 0 2 1246 698 169 7 0 chrX 86655204 86655346 -79994950 + T-rich Low_complexity Low_complexity 3 145 0 2 1246 252 317 12 12 chrX 86655521 86655604 -79994692 - B4 SINE B4 -207 85 3 2 1246 602 342 21 7 chrX 86656518 86656798 -79993498 - B4A SINE B4 -4 288 5 2 1246 349 296 36 24 chrX 86656951 86657117 -79993179 + L1ME3B LINE L1 5678 5845 -395 2 1246 491 306 0 0 chrX 86657124 86657248 -79993048 + ID_B1 SINE B4 91 214 -10 2 1246 1769 191 45 23 chrX 86657451 86657805 -79992491 - ORR1C2 LTR MaLR 0 384 23 2 1246 3763 137 3 7 chrX 86657803 86658392 -79991904 + ORR1A2-int LTR MaLR 1377 1963 0 2 1246 2164 129 3 0 chrX 86658393 86658718 -79991578 + ORR1A2 LTR MaLR 2 327 0 2 1246 1563 197 43 0 chrX 86658720 86659024 -79991272 - ORR1C2 LTR MaLR -39 345 29 2 1246 939 300 48 17 chrX 86659326 86659743 -79990553 - Charlie1b DNA MER1_type -59 464 35 2 1246 1128 89 0 0 chrX 86660004 86660162 -79990134 + (TG)n Simple_repeat Simple_repeat 2 159 0 2 1246 268 288 30 15 chrX 86660213 86660280 -79990016 - BC1_Mm scRNA scRNA -72 80 13 2 1246 362 307 169 11 chrX 86660418 86660596 -79989700 - B4A SINE B4 -85 207 2 2 1246 901 338 37 9 chrX 86661376 86661699 -79988597 + Lx8 LINE L1 7018 7349 -124 2 1246 22 35 0 0 chrX 86662407 86662436 -79987860 + AT_rich Low_complexity Low_complexity 1 29 0 2 1246 278 295 75 9 chrX 86662557 86662663 -79987633 + B4A SINE B4 153 265 -27 2 1246 396 0 0 0 chrX 86662673 86662717 -79987579 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1246 334 307 106 35 chrX 86663090 86663313 -79986983 + MLT1D LTR MaLR 21 256 -371 2 1246 243 0 0 0 chrX 86663365 86663392 -79986904 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1246 1664 174 97 40 chrX 86664615 86664967 -79985329 - RMER16 LTR ERVK -146 387 16 2 1246 321 226 66 87 chrX 86664972 86665214 -79985082 - Lx7 LINE L1 -104 7592 7356 2 1246 336 164 0 0 chrX 86665214 86665281 -79985015 + GA-rich Low_complexity Low_complexity 4 70 0 2 1246 336 102 0 0 chrX 86665327 86665376 -79984920 + (GGA)n Simple_repeat Simple_repeat 3 51 0 2 1246 1565 260 66 2 chrX 86665380 86665789 -79984507 - Lx7 LINE L1 -386 7310 6876 2 1246 234 171 0 0 chrX 86665806 86665847 -79984449 - Lx7 LINE L1 -904 6792 6752 2 1246 603 140 82 75 chrX 86665849 86665996 -79984300 - URR1A DNA MER1_type 0 226 79 2 1246 228 300 42 76 chrX 86665890 86666009 -79984287 + CYRA11_Mm Unknown Y-chromosome 221 335 -282 2 1246 4103 244 57 26 chrX 86666042 86666526 -79983770 - Lx7 LINE L1 -940 6756 6244 2 1246 477 0 0 0 chrX 86666526 86666579 -79983717 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 1246 4103 244 57 26 chrX 86666579 86666967 -79983329 - Lx7 LINE L1 -1453 6243 5847 2 1246 1660 157 181 10 chrX 86666967 86667365 -79982931 - RMER4A LTR ERVK 0 466 1 2 1246 4103 244 57 26 chrX 86667365 86667624 -79982672 - Lx7 LINE L1 -1850 5846 5590 2 1246 38383 6 0 0 chrX 86667622 86672995 -79977301 + L1Md_A LINE L1 213 5586 -297 2 1246 8985 4 0 0 chrX 86672995 86673991 -79976305 + L1Md_A LINE L1 5587 6582 0 2 1246 1214 227 22 11 chrX 86673997 86674269 -79976027 - Lx7 LINE L1 -275 5605 5331 2 1246 6131 87 8 0 chrX 86674636 86675472 -79974824 - L1_Mus1 LINE L1 0 6654 5731 2 1246 807 316 22 4 chrX 86675503 86675779 -79974517 - Lx8 LINE L1 -459 7014 6734 2 1246 23 33 0 0 chrX 86675785 86675815 -79974481 + AT_rich Low_complexity Low_complexity 1 30 0 2 1246 1173 186 36 24 chrX 86676147 86676395 -79973901 - Lx7 LINE L1 -675 7021 6771 2 1246 261 0 0 0 chrX 86676403 86676432 -79973864 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1246 782 183 6 0 chrX 86676432 86676601 -79973695 + (TA)n Simple_repeat Simple_repeat 2 171 0 2 1246 300 120 0 0 chrX 86676959 86677009 -79973287 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1246 249 57 0 0 chrX 86677213 86677248 -79973048 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1246 24 0 0 0 chrX 86677287 86677311 -79972985 + AT_rich Low_complexity Low_complexity 1 24 0 2 1246 25 0 0 0 chrX 86677417 86677442 -79972854 + AT_rich Low_complexity Low_complexity 1 25 0 2 1246 390 329 73 79 chrX 86677859 86678154 -79972142 - MLT2B4 LTR ERVL -3 669 396 2 1246 314 283 79 48 chrX 86678403 86678592 -79971704 + L1ME1 LINE L1 5743 5937 -242 2 1246 7023 96 14 6 chrX 86678895 86680086 -79970210 + L1_Mus2 LINE L1 5351 6566 0 2 1246 1052 95 0 0 chrX 86680091 86680238 -79970058 + B1_Mus2 SINE Alu 1 147 0 2 1246 372 111 0 0 chrX 86680238 86680301 -79969995 + (A)n Simple_repeat Simple_repeat 1 63 0 2 1246 28 61 0 0 chrX 86680325 86680374 -79969922 + AT_rich Low_complexity Low_complexity 1 49 0 3 1246 232 231 0 0 chrX 86680374 86680426 -79969870 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1246 225 350 73 107 chrX 86680452 86680724 -79969572 - B4A SINE B4 -15 277 15 3 1246 4037 97 0 0 chrX 86681486 86682045 -79968251 - L1_Mus1 LINE L1 0 6567 6009 3 1246 219 222 29 29 chrX 86682191 86682274 -79968022 + T-rich Low_complexity Low_complexity 24 107 0 3 1246 1138 68 0 20 chrX 86682274 86682424 -79967872 - B1_Mus2 SINE Alu 0 147 1 3 1246 219 222 29 29 chrX 86682424 86682442 -79967854 + T-rich Low_complexity Low_complexity 6 23 0 3 1246 24 32 0 0 chrX 86682538 86682569 -79967727 + AT_rich Low_complexity Low_complexity 1 31 0 3 1246 270 0 0 0 chrX 86683893 86683923 -79966373 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 3 1246 248 178 0 0 chrX 86686378 86686423 -79963873 + MER58D DNA MER1_type 332 376 -10 3 1246 3608 68 8 2 chrX 86686550 86687021 -79963275 - L1_Mus2 LINE L1 -1 6565 6092 3 1246 2109 95 0 0 chrX 86687021 86687310 -79962986 + L1_Mus2 LINE L1 5785 6073 -493 3 1246 233 386 94 42 chrX 86687330 86687714 -79962582 + L2 LINE L2 1964 2367 -1052 3 1246 25 31 0 0 chrX 86688229 86688261 -79962035 + AT_rich Low_complexity Low_complexity 1 32 0 3 1246 1108 83 0 7 chrX 86689262 86689408 -79960888 + B1_Mm SINE Alu 2 146 -1 3 1246 384 200 0 0 chrX 86689413 86689528 -79960768 + A-rich Low_complexity Low_complexity 1 115 0 3 1246 276 77 0 0 chrX 86689536 86689575 -79960721 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1246 435 328 8 8 chrX 86690404 86690530 -79959766 - B1F SINE Alu -7 142 17 3 1246 444 266 9 36 chrX 86691201 86691343 -79958953 + B3A SINE B2 64 214 -2 3 1246 581 352 0 0 chrX 86691939 86692078 -79958218 + ID_B1 SINE B4 84 222 -2 3 1246 32 26 0 0 chrX 86692317 86692356 -79957940 + AT_rich Low_complexity Low_complexity 1 39 0 3 1246 2485 92 0 8 chrX 86692465 86692818 -79957478 - L1Md_F2 LINE L1 -13 6569 6220 3 1246 28 48 0 0 chrX 86692966 86693008 -79957288 + AT_rich Low_complexity Low_complexity 1 42 0 3 1246 201 303 174 49 chrX 86694015 86694199 -79956097 + L2a LINE L2 3220 3426 0 3 1246 315 0 0 0 chrX 86694291 86694326 -79955970 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 1246 442 368 75 18 chrX 86694713 86695167 -79955129 - Lx8 LINE L1 -99 7374 6895 3 1246 528 314 76 14 chrX 86695403 86695807 -79954489 - L1MA8 LINE L1 -218 6073 5657 3 1246 226 213 246 110 chrX 86696074 86696143 -79954153 + Lx7 LINE L1 7337 7405 -291 3 1246 189 0 0 0 chrX 86696143 86696164 -79954132 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3 1246 978 76 76 0 chrX 86696168 86696300 -79953996 - B1_Mus1 SINE Alu -6 142 1 3 1246 226 213 246 110 chrX 86696300 86696542 -79953754 + Lx7 LINE L1 7406 7696 0 3 1246 584 261 0 0 chrX 86696866 86696981 -79953315 - B1_Mur2 SINE Alu -25 124 10 3 1246 250 418 36 0 chrX 86696885 86696995 -79953301 - B4A SINE B4 -98 194 81 3 1246 5096 78 15 3 chrX 86697329 86698010 -79952286 - L1Md_F2 LINE L1 -12 6570 5882 3 1246 7041 82 2 6 chrX 86698010 86698966 -79951330 + L1Md_F2 LINE L1 4827 5778 -105 3 1246 22 0 0 0 chrX 86699445 86699467 -79950829 + AT_rich Low_complexity Low_complexity 1 22 0 3 1246 1960 92 18 0 chrX 86700224 86700506 -79949790 + Lx LINE L1 6359 6645 -9 3 1246 21 71 0 0 chrX 86700535 86700577 -79949719 + AT_rich Low_complexity Low_complexity 1 42 0 3 1246 3640 94 23 4 chrX 86700785 86701310 -79948986 - L1_Mus3 LINE L1 -7 6631 6097 3 1246 673 286 14 5 chrX 86701311 86701522 -79948774 - B3 SINE B2 -2 214 2 3 1246 1281 32 6 0 chrX 86702903 86703059 -79947237 - L1Md_T LINE L1 -637 5945 5789 3 1246 5094 36 2 0 chrX 86703059 86703665 -79946631 + L1Md_T LINE L1 5976 6582 0 3 1246 25 31 0 0 chrX 86704640 86704672 -79945624 + AT_rich Low_complexity Low_complexity 1 32 0 3 1246 2019 194 23 28 chrX 86705320 86705718 -79944578 - MTB_Mm LTR MaLR -8 399 4 3 1246 23 33 0 0 chrX 86705751 86705781 -79944515 + AT_rich Low_complexity Low_complexity 1 30 0 3 1246 231 108 47 35 chrX 86706609 86706695 -79943601 + T-rich Low_complexity Low_complexity 3 89 0 3 1246 570 193 25 42 chrX 86706696 86706815 -79943481 - B1_Mur3 SINE Alu -1 148 32 3 1246 283 354 0 0 chrX 86706845 86706927 -79943369 + ID2 SINE ID 2 83 0 3 1246 414 0 0 0 chrX 86707881 86707927 -79942369 + (TTTTG)n Simple_repeat Simple_repeat 3 48 0 3 1246 749 87 0 0 chrX 86707929 86708032 -79942264 - B2_Mm2 SINE B2 -91 104 2 3 1246 6021 162 9 6 chrX 86708910 86709960 -79940336 - Lx2A1 LINE L1 0 7008 5956 3 1246 4860 145 12 20 chrX 86709960 86710960 -79939336 + Lx2A1 LINE L1 4949 5947 -1061 3 1246 601 296 95 5 chrX 86711070 86711260 -79939036 - B4A SINE B4 -84 208 2 3 1246 2082 56 0 19 chrX 86711507 86711778 -79938518 + L1Md_F2 LINE L1 5321 5586 -297 3 1246 7982 52 4 5 chrX 86711779 86712775 -79937521 + L1Md_F2 LINE L1 5588 6582 0 3 1246 349 308 22 0 chrX 86712868 86712959 -79937337 - B3A SINE B2 -78 120 28 3 1246 262 275 124 35 chrX 86713538 86713600 -79936696 - LTR80B LTR ERVL -391 193 123 3 1246 207 0 0 0 chrX 86713600 86713623 -79936673 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1246 262 275 124 35 chrX 86713623 86713673 -79936623 - LTR80B LTR ERVL -462 122 71 3 1246 456 317 6 35 chrX 86713693 86713866 -79936430 - Lx8 LINE L1 -119 7354 7187 3 1246 31 0 0 43 chrX 86713893 86713909 -79936387 + AT_rich Low_complexity Low_complexity 1 16 0 3 1246 5241 106 27 4 chrX 86713909 86714683 -79935613 + Lx3_Mus LINE L1 6218 7009 0 3 1246 31 0 0 43 chrX 86714683 86714712 -79935584 + AT_rich Low_complexity Low_complexity 1 28 0 3 1246 437 31 0 0 chrX 86714894 86714958 -79935338 - L1_Mus3 LINE L1 -1 6637 6574 3 1246 303 93 0 0 chrX 86715271 86715314 -79934982 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1246 212 158 0 0 chrX 86715317 86715355 -79934941 + (CAGA)n Simple_repeat Simple_repeat 2 39 0 3 1246 610 360 17 0 chrX 86715362 86715534 -79934762 - B3A SINE B2 -23 175 1 3 1246 255 217 43 0 chrX 86715598 86715667 -79934629 + (TCTCTG)n Simple_repeat Simple_repeat 6 77 0 3 1246 5861 247 65 61 chrX 86715825 86716161 -79934135 - Lx7 LINE L1 -5 7691 7368 3 1246 504 0 0 0 chrX 86716161 86716217 -79934079 + (GA)n Simple_repeat Simple_repeat 1 56 0 3 1246 5861 247 65 61 chrX 86716217 86716815 -79933481 - Lx7 LINE L1 -329 7367 6757 3 1246 183 42 0 0 chrX 86716815 86716839 -79933457 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 1246 5861 247 65 61 chrX 86716839 86717990 -79932306 - Lx7 LINE L1 -940 6756 5596 3 1246 1809 214 62 81 chrX 86717984 86718628 -79931668 - Lx7 LINE L1 -935 4945 4314 3 1246 4345 180 67 16 chrX 86718624 86718670 -79931626 - Lx7 LINE L1 -3616 2264 2219 3 1246 474 18 0 0 chrX 86718670 86718725 -79931571 + (TTTC)n Simple_repeat Simple_repeat 4 58 0 3 1246 4345 180 67 16 chrX 86718725 86719278 -79931018 - Lx7 LINE L1 -3662 2218 1623 3 1246 612 0 0 0 chrX 86719278 86719346 -79930950 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 1246 4588 212 74 21 chrX 86719346 86720830 -79929466 - Lx7 LINE L1 -4258 1622 56 3 1246 398 204 5 5 chrX 86721439 86721526 -79928770 + L1_Mur3 LINE L1 277 343 -7369 3 1246 473 296 74 17 chrX 86721742 86721917 -79928379 - RMER30 DNA MER1_type -16 186 2 3 1246 1098 292 24 7 chrX 86722255 86722551 -79927745 - MTE2a LTR MaLR -21 358 58 3 1246 213 307 31 154 chrX 86722958 86723120 -79927176 + B4 SINE B4 2 143 -149 3 1246 258 105 0 0 chrX 86723188 86723226 -79927070 + (A)n Simple_repeat Simple_repeat 1 38 0 3 1246 376 132 24 0 chrX 86723286 86723369 -79926927 + (CA)n Simple_repeat Simple_repeat 2 86 0 3 1246 444 165 0 0 chrX 86723368 86723459 -79926837 + GA-rich Low_complexity Low_complexity 2 92 0 3 1246 728 280 83 0 chrX 86723581 86723774 -79926522 - B3 SINE B2 -5 211 3 3 1246 213 39 0 0 chrX 86724176 86724202 -79926094 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 1246 260 276 17 0 chrX 86724655 86724713 -79925583 - B1F SINE Alu -89 60 2 3 1246 719 245 267 91 chrX 86724942 86725395 -79924901 - ORR1D-int LTR MaLR -443 927 395 3 1246 307 272 10 80 chrX 86725397 86725497 -79924799 - ORR1D-int LTR MaLR -1228 142 50 3 1246 363 145 0 0 chrX 86725498 86725581 -79924715 + (GA)n Simple_repeat Simple_repeat 2 84 0 3 1246 1045 87 0 0 chrX 86725723 86725861 -79924435 + B1_Mus1 SINE Alu 3 140 -8 3 1246 420 20 0 0 chrX 86725871 86725920 -79924376 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 3 1246 437 0 19 0 chrX 86725998 86726051 -79924245 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 1246 232 347 70 83 chrX 86726737 86726894 -79923402 - ID_B1 SINE B4 -69 155 1 3 1246 2710 129 9 5 chrX 86727106 86727527 -79922769 - L1_Mus4 LINE L1 -5 6631 6209 3 1246 569 311 94 55 chrX 86727940 86727972 -79922324 + B3 SINE B2 3 34 -182 3 1246 624 71 10 0 chrX 86727972 86728071 -79922225 + L1_Mus1 LINE L1 6468 6567 0 3 1246 569 311 94 55 chrX 86728071 86728210 -79922086 + B3 SINE B2 35 183 -33 3 1246 306 73 0 0 chrX 86728210 86728251 -79922045 + (CATA)n Simple_repeat Simple_repeat 2 42 0 3 1246 569 311 94 55 chrX 86728251 86728279 -79922017 + B3 SINE B2 184 211 -5 3 1246 332 290 0 41 chrX 86728515 86728612 -79921684 - Lx8 LINE L1 -123 7350 7258 3 1246 2786 295 45 54 chrX 86728641 86728808 -79921488 - Lx8 LINE L1 -314 7159 7007 3 1246 511 262 136 60 chrX 86728808 86729007 -79921289 - B3 SINE B2 0 216 3 3 1246 2786 295 45 54 chrX 86729007 86729987 -79920309 - Lx8 LINE L1 -467 7006 6022 3 1246 411 284 96 9 chrX 86730279 86730504 -79919792 - Lx8 LINE L1 -1584 5889 5629 3 1246 2527 206 95 54 chrX 86730871 86730955 -79919341 - RLTR22_Mur LTR ERVK -426 1422 1340 3 1246 333 47 0 0 chrX 86730955 86730998 -79919298 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1246 2527 206 95 54 chrX 86730998 86731211 -79919085 - RLTR22_Mur LTR ERVK -509 1339 1117 3 1246 1074 76 7 20 chrX 86731211 86731359 -79918937 + B1_Mus2 SINE Alu 2 147 0 3 1246 2527 206 95 54 chrX 86731359 86731372 -79918924 - RLTR22_Mur LTR ERVK -732 1116 1116 3 1246 297 0 0 0 chrX 86731372 86731405 -79918891 + (GGAA)n Simple_repeat Simple_repeat 3 35 0 3 1246 2527 206 95 54 chrX 86731405 86731800 -79918496 - RLTR22_Mur LTR ERVK -732 1116 688 3 1246 6703 63 1 11 chrX 86731800 86733423 -79916873 + L1Md_Gf LINE L1 272 1976 -3910 3 1246 35249 40 0 0 chrX 86733423 86739055 -79911241 + L1Md_T LINE L1 1 5589 -297 3 1246 8949 7 0 0 chrX 86739055 86740051 -79910245 + L1Md_T LINE L1 5590 6585 0 3 1246 29593 39 0 0 chrX 86740224 86743858 -79906438 + L1Md_T LINE L1 1952 5586 -297 3 1246 8366 35 1 0 chrX 86743859 86744853 -79905443 + L1Md_T LINE L1 5588 6582 0 3 1246 2853 182 35 120 chrX 86744853 86745446 -79904850 - RLTR22_Mur LTR ERVK -1149 699 164 3 1246 468 0 0 0 chrX 86745446 86745498 -79904798 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1246 207 0 0 0 chrX 86745498 86745520 -79904776 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1246 2853 182 35 120 chrX 86745520 86745685 -79904611 - RLTR22_Mur LTR ERVK -1685 163 5 3 1246 331 220 109 10 chrX 86745698 86745799 -79904497 - ORR1D1 LTR MaLR -261 113 3 3 1246 379 250 0 0 chrX 86745805 86745881 -79904415 - ORR1D1-int LTR MaLR -4 1366 1291 3 1246 1118 269 136 15 chrX 86745891 86746223 -79904073 - ORR1D1-int LTR MaLR -998 372 1 3 1246 221 102 47 78 chrX 86746253 86746317 -79903979 + A-rich Low_complexity Low_complexity 3 64 0 3 1246 1110 277 67 18 chrX 86746320 86746651 -79903645 - ORR1D1 LTR MaLR -27 347 1 3 1246 5486 108 64 109 chrX 86746789 86747094 -79903202 - L1_Mus3 LINE L1 -5 6633 6264 4 1246 506 16 16 0 chrX 86747094 86747157 -79903139 + (TA)n Simple_repeat Simple_repeat 2 65 0 4 1246 7759 111 31 57 chrX 86747157 86748793 -79901503 - L1_Mus3 LINE L1 -375 6263 4750 4 1246 595 195 41 0 chrX 86748793 86748916 -79901380 + B1_Mus1 SINE Alu 19 146 -2 4 1246 287 0 0 50 chrX 86749590 86749630 -79900666 + (TAAAA)n Simple_repeat Simple_repeat 5 42 0 4 1246 723 44 0 0 chrX 86749661 86749752 -79900544 + (TG)n Simple_repeat Simple_repeat 1 91 0 4 1246 1080 141 10 5 chrX 86751323 86751515 -79898781 + L1_Mus3 LINE L1 6445 6637 -1 4 1246 378 42 0 0 chrX 86751532 86751580 -79898716 + (GA)n Simple_repeat Simple_repeat 2 49 0 4 1246 245 0 43 43 chrX 86753061 86753108 -79897188 + (TTTTG)n Simple_repeat Simple_repeat 5 51 0 4 1246 260 306 0 16 chrX 86753968 86754031 -79896265 + ID4 SINE ID 11 72 -11 4 1246 322 331 46 20 chrX 86754265 86754416 -79895880 - MLT1I LTR MaLR -217 194 40 4 1246 527 296 30 22 chrX 86754617 86754752 -79895544 - B3A SINE B2 -62 136 1 4 1246 594 51 0 0 chrX 86755212 86755290 -79895006 + (TC)n Simple_repeat Simple_repeat 2 79 0 4 1246 542 177 0 17 chrX 86755397 86755512 -79894784 + T-rich Low_complexity Low_complexity 2 114 0 4 1246 617 271 0 14 chrX 86755514 86755656 -79894640 - B1_Mur2 SINE Alu 0 149 10 4 1246 368 325 39 32 chrX 86755673 86755829 -79894467 + LTR82A LTR ERVL 277 433 -439 4 1246 23 0 0 0 chrX 86756293 86756316 -79893980 + AT_rich Low_complexity Low_complexity 1 23 0 4 1246 21 36 0 0 chrX 86756412 86756440 -79893856 + AT_rich Low_complexity Low_complexity 1 28 0 4 1246 295 301 95 21 chrX 86756673 86756768 -79893528 - PB1D10 SINE Alu -6 111 10 4 1246 227 338 51 63 chrX 86757167 86757325 -79892971 + MER5B DNA MER1_type 3 158 -20 4 1246 1488 189 6 163 chrX 86758160 86758318 -79891978 - RMER17C LTR ERVK 0 410 257 4 1246 1963 149 16 35 chrX 86758318 86758693 -79891603 + RLTR9A LTR ERVK 1 368 0 4 1246 1488 189 6 163 chrX 86758693 86759020 -79891276 - RMER17C LTR ERVK -154 256 1 4 1246 232 282 66 66 chrX 86759039 86759130 -79891166 - RMER4B LTR ERVK -107 478 388 4 1246 3319 111 38 15 chrX 86759131 86759655 -79890641 - RMER17C-int LTR ERVK -107 3131 2596 4 1246 7834 213 55 76 chrX 86759653 86761304 -79888992 - RMER17C-int LTR ERVK -831 2407 811 4 1246 3879 73 7 31 chrX 86761304 86761843 -79888453 + L1_Mus2 LINE L1 6040 6565 -1 4 1246 7834 213 55 76 chrX 86761843 86762568 -79887728 - RMER17C-int LTR ERVK -2428 810 82 4 1246 464 36 0 0 chrX 86762613 86762668 -79887628 - L1Md_F2 LINE L1 -489 6095 6041 4 1246 3472 48 85 2 chrX 86762668 86763166 -79887130 + L1Md_F2 LINE L1 6086 6582 0 4 1246 931 189 40 179 chrX 86763226 86763702 -79886594 - RMER17C LTR ERVK 0 410 1 4 1246 23 54 0 0 chrX 86763703 86763740 -79886556 + AT_rich Low_complexity Low_complexity 1 37 0 4 1246 711 301 14 33 chrX 86764280 86764493 -79885803 + B3 SINE B2 1 209 -7 4 1246 183 184 0 0 chrX 86764637 86764675 -79885621 + (TTA)n Simple_repeat Simple_repeat 2 39 0 4 1246 7422 37 7 2 chrX 86764840 86765746 -79884550 - L1Md_F3 LINE L1 -14 6570 5675 4 1246 204 135 0 0 chrX 86765810 86765847 -79884449 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 4 1246 2187 94 162 0 chrX 86765908 86766260 -79884036 - IAPLTR2a LTR ERVK -2 409 1 4 1246 6516 58 12 19 chrX 86766262 86767118 -79883178 - IAPEz-int LTR ERVK -2 6479 5630 4 155 21816 43 81 23 chrX 86767104 86769998 -79880298 - IAPEz-int LTR ERVK -3405 3076 17 4 1247 253 139 0 0 chrX 86769979 86770022 -79880274 - IAPEz-int LTR ERVK -1930 57 15 4 1247 340 104 56 69 chrX 86770027 86770099 -79880197 - IAPEz-int LTR ERVK -1914 73 3 4 1247 2187 94 162 0 chrX 86770106 86770458 -79879838 - IAPLTR2a LTR ERVK -2 409 1 4 1247 2853 122 9 7 chrX 86771271 86771709 -79878587 - L1_Mur2 LINE L1 -270 5607 5169 4 1247 348 24 0 0 chrX 86772036 86772077 -79878219 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 4 1247 465 298 118 6 chrX 86772077 86772246 -79878050 - B3 SINE B2 -27 189 2 4 1247 363 281 73 24 chrX 86772733 86772857 -79877439 - B1F1 SINE Alu 0 149 20 4 1247 3600 132 86 0 chrX 86772945 86773559 -79876737 + L1Md_F2 LINE L1 570 1236 -5380 4 1247 9444 76 2 1 chrX 86776665 86777924 -79872372 + L1Md_F2 LINE L1 4326 5585 -298 4 1247 7472 74 0 5 chrX 86777925 86778915 -79871381 + L1Md_F2 LINE L1 5587 6571 -11 4 1247 280 271 0 0 chrX 86778922 86778992 -79871304 + L1MD3 LINE L1 5565 5634 -545 4 1247 266 276 53 30 chrX 86779129 86779260 -79871036 + L1MD3 LINE L1 5804 5937 -2058 4 1247 318 362 29 52 chrX 86779559 86779731 -79870565 + MER5A DNA MER1_type 18 185 -4 4 1247 280 312 37 43 chrX 86779805 86779969 -79870327 + L2c LINE L2 3147 3309 -78 4 1247 209 293 160 0 chrX 86780033 86780108 -79870188 - L2 LINE L2 -3248 171 85 4 1247 634 383 68 24 chrX 86780169 86780506 -79869790 + LTR16B2 LTR ERVL 10 361 -101 4 1247 7564 73 1 4 chrX 86780642 86781982 -79868314 - L1_Mus1 LINE L1 0 6654 5237 4 1247 8015 151 33 19 chrX 86781973 86783770 -79866526 - Lx2 LINE L1 -15 6982 5164 4 1247 505 153 17 3 chrX 86783764 86783867 -79866429 + L1_Rod LINE L1 1489 1604 -4243 4 1247 30 0 0 0 chrX 86784084 86784114 -79866182 + AT_rich Low_complexity Low_complexity 1 30 0 4 1247 329 261 134 11 chrX 86784383 86784508 -79865788 + B1F SINE Alu 10 149 0 4 1247 319 155 28 0 chrX 86785092 86785163 -79865133 - L1_Mur3 LINE L1 -4445 1435 1363 4 1247 288 0 0 0 chrX 86785165 86785197 -79865099 + (TC)n Simple_repeat Simple_repeat 1 32 0 4 1247 596 309 6 62 chrX 86785770 86785949 -79864347 + B4A SINE B4 2 170 -122 4 1247 234 289 26 13 chrX 86785880 86785957 -79864339 + B1F1 SINE Alu 17 94 -55 4 1247 331 345 71 12 chrX 86786215 86786385 -79863911 - MIR SINE MIR -78 184 5 4 1247 216 0 0 0 chrX 86786511 86786535 -79863761 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 1247 225 0 0 0 chrX 86786535 86786559 -79863737 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1247 22 56 0 0 chrX 86787619 86787655 -79862641 + AT_rich Low_complexity Low_complexity 1 36 0 4 1247 209 274 0 0 chrX 86787815 86787866 -79862430 - L2a LINE L2 -56 3370 3320 4 1247 428 331 22 8 chrX 86787915 86788049 -79862247 + B1F SINE Alu 2 137 -12 4 1247 222 37 0 0 chrX 86788051 86788078 -79862218 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1247 718 247 23 6 chrX 86788088 86788263 -79862033 + B3A SINE B2 5 182 -16 4 1247 376 369 37 15 chrX 86788314 86788449 -79861847 + RSINE1 SINE B4 4 141 -24 4 1247 21 82 0 0 chrX 86788472 86788521 -79861775 + AT_rich Low_complexity Low_complexity 1 49 0 4 1247 238 280 0 0 chrX 86788539 86788589 -79861707 + ID4_ SINE ID 11 60 -23 4 1247 441 209 111 69 chrX 86788678 86788822 -79861474 - RLTR25B LTR ERVK 0 1028 879 4 1247 590 152 6 159 chrX 86788806 86788963 -79861333 - RLTR25B LTR ERVK -264 764 632 4 1247 406 17 17 33 chrX 86789143 86789203 -79861093 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 4 1247 8345 28 0 1 chrX 86789390 86790578 -79859718 - L1Md_T LINE L1 -2 6580 5395 4 1247 2394 159 30 118 chrX 86790579 86791149 -79859147 - Lx3C LINE L1 -2 6974 6455 4 1247 2246 208 121 2 chrX 86791165 86791743 -79858553 - L1_Mur3 LINE L1 -406 5474 4828 4 1247 2951 238 14 28 chrX 86791743 86792585 -79857711 + Lx4B LINE L1 6101 6955 -42 4 1247 288 53 0 0 chrX 86792598 86792636 -79857660 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 4 1247 1393 171 14 100 chrX 86792639 86792787 -79857509 - L1_Mur3 LINE L1 -1078 4802 4654 4 1247 183 42 0 0 chrX 86792787 86792811 -79857485 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 4 1247 1393 171 14 100 chrX 86792811 86793012 -79857284 - L1_Mur3 LINE L1 -1227 4653 4483 4 1247 675 145 0 9 chrX 86793010 86793121 -79857175 + Lx4B LINE L1 6630 6739 -319 4 1247 449 107 23 23 chrX 86793131 86793217 -79857079 + L1_Mur3 LINE L1 4565 4650 -1230 4 1247 653 170 22 15 chrX 86793260 86793397 -79856899 - L1_Mur3 LINE L1 -1408 4472 4335 4 1247 2049 150 89 26 chrX 86793388 86793771 -79856525 - L1VL4 LINE L1 -5496 806 400 4 1247 865 111 0 32 chrX 86793781 86793939 -79856357 - Lx LINE L1 0 6654 6502 4 1247 210 171 0 0 chrX 86794035 86794070 -79856226 + A-rich Low_complexity Low_complexity 1 35 0 4 1247 291 279 68 95 chrX 86794101 86794291 -79856005 - RLTR25A LTR ERVK 0 1103 919 4 1247 1072 75 0 39 chrX 86796074 86796227 -79854069 + B1_Mm SINE Alu 1 147 0 4 1247 412 283 93 14 chrX 86796227 86796367 -79853929 + B3A SINE B2 2 152 -46 4 1247 8997 140 5 3 chrX 86796455 86797978 -79852318 + Lx2 LINE L1 5471 6997 0 4 1247 4725 192 24 29 chrX 86797982 86799129 -79851167 - L1_Mur3 LINE L1 -1529 4351 3210 4 1247 294 262 82 6 chrX 86799134 86799386 -79850910 + L1MA9 LINE L1 4214 4494 -1646 4 1247 296 282 173 0 chrX 86799489 86799645 -79850651 + L1MA9 LINE L1 5029 5211 -929 4 1247 591 315 81 9 chrX 86799710 86800193 -79850103 + L1MA9 LINE L1 5591 6130 -59 4 1247 372 200 0 0 chrX 86800316 86800396 -79849900 + (TA)n Simple_repeat Simple_repeat 2 81 0 4 1247 183 129 0 0 chrX 86800471 86800502 -79849794 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1247 603 27 0 0 chrX 86800504 86800577 -79849719 + (GA)n Simple_repeat Simple_repeat 1 73 0 4 1247 425 357 21 7 chrX 86800582 86800726 -79849570 - RSINE1 SINE B4 -17 148 3 4 1247 308 418 30 4 chrX 86801708 86801972 -79848324 + LTR33A LTR ERVL 248 518 -2 4 1247 263 338 25 0 chrX 86802841 86802921 -79847375 + ID4 SINE ID 1 82 -1 4 1247 328 316 67 41 chrX 86803246 86803441 -79846855 - L1MC4 LINE L1 -969 7073 6874 4 1247 21 0 0 0 chrX 86803476 86803497 -79846799 + AT_rich Low_complexity Low_complexity 1 21 0 4 1247 420 97 0 0 chrX 86804376 86804438 -79845858 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 1247 322 325 55 39 chrX 86804741 86804869 -79845427 + MER91A DNA Tip100 53 182 -14 4 1247 7096 112 16 11 chrX 86805432 86806528 -79843768 + Lx3_Mus LINE L1 5908 7009 0 4 1247 315 0 0 0 chrX 86806604 86806639 -79843657 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 1247 26 30 0 0 chrX 86806640 86806673 -79843623 + AT_rich Low_complexity Low_complexity 1 33 0 4 1247 414 340 0 60 chrX 86806881 86807047 -79843249 + RSINE1 SINE B4 10 165 0 4 1247 22 35 0 0 chrX 86807059 86807088 -79843208 + AT_rich Low_complexity Low_complexity 1 29 0 4 1247 23607 90 11 10 chrX 86807364 86810779 -79839517 + L1Md_F2 LINE L1 2168 5584 -299 4 1247 7364 87 1 2 chrX 86810781 86811764 -79838532 + L1Md_F2 LINE L1 5587 6568 -14 4 1247 566 122 0 9 chrX 86812416 86812524 -79837772 + (TA)n Simple_repeat Simple_repeat 1 107 0 4 1247 21867 174 14 12 chrX 86812564 86813703 -79836593 + L1_Mus2 LINE L1 866 2019 -3864 4 1247 665 44 33 0 chrX 86813703 86813794 -79836502 + (TTTTC)n Simple_repeat Simple_repeat 4 97 0 4 1247 21867 187 20 21 chrX 86813794 86817663 -79832633 + L1_Mus2 LINE L1 2020 5869 -14 4 1247 1218 163 0 0 chrX 86817665 86817868 -79832428 + L1_Mm LINE L1 4685 4887 -996 4 1247 3624 172 53 0 chrX 86817858 86818519 -79831777 + L1_Mus2 LINE L1 5870 6565 -1 4 1247 2170 162 5 3 chrX 86818536 86818908 -79831388 + Lx LINE L1 6270 6642 -12 4 1247 258 331 113 14 chrX 86820101 86820242 -79830054 + MIRb SINE MIR 96 250 -18 4 1247 262 150 0 0 chrX 86820463 86820503 -79829793 + MLT1M LTR MaLR 231 270 -402 5 1247 1667 232 24 8 chrX 86821124 86821502 -79828794 + Lx2B LINE L1 6616 6999 -1 5 1247 27 0 0 0 chrX 86821664 86821691 -79828605 + AT_rich Low_complexity Low_complexity 1 27 0 5 1247 201 39 0 0 chrX 86822438 86822464 -79827832 + (A)n Simple_repeat Simple_repeat 1 26 0 5 1247 1003 177 63 138 chrX 86823112 86823204 -79827092 - RLTRETN_Mm LTR ERVK 0 322 222 5 1247 309 26 0 0 chrX 86823204 86823242 -79827054 + (GA)n Simple_repeat Simple_repeat 1 38 0 5 1247 1003 177 63 138 chrX 86823242 86823497 -79826799 - RLTRETN_Mm LTR ERVK -101 221 1 5 1247 429 110 6 0 chrX 86823533 86823610 -79826686 - ETnERV2-int LTR ERVK -25 7381 7327 5 1247 352 202 357 62 chrX 86823610 86823899 -79826397 - RLTR13D6 LTR ERVK -371 531 155 5 1247 6408 136 26 16 chrX 86823901 86824874 -79825422 - ETnERV2-int LTR ERVK -203 7203 6222 5 1247 5114 147 18 41 chrX 86824976 86826129 -79824167 - ETnERV2-int LTR ERVK -3321 4085 2356 5 1247 564 56 0 0 chrX 86826129 86826201 -79824095 + (TA)n Simple_repeat Simple_repeat 1 72 0 5 1247 4014 198 85 106 chrX 86826201 86827612 -79822684 - ETnERV2-int LTR ERVK -3398 4008 2630 5 1247 6376 117 12 83 chrX 86827627 86828828 -79821468 - MMETn-int LTR ERVK -3719 1125 10 5 1247 999 188 51 134 chrX 86828838 86828929 -79821367 - RLTRETN_Mm LTR ERVK 0 322 235 5 1247 660 71 0 0 chrX 86828929 86829028 -79821268 + (GA)n Simple_repeat Simple_repeat 1 99 0 5 1247 999 188 51 134 chrX 86829028 86829287 -79821009 - RLTRETN_Mm LTR ERVK -88 234 1 5 1247 269 400 39 23 chrX 86829389 86829517 -79820779 + B3A SINE B2 1 130 -68 5 1247 6727 131 13 8 chrX 86829951 86831258 -79819038 - Lx LINE L1 -1 6653 5339 5 1247 5369 92 19 3 chrX 86831258 86832009 -79818287 + L1_Mus2 LINE L1 5802 6564 -2 5 1247 5427 127 43 8 chrX 86832009 86832290 -79818006 - RMER16-int LTR ERVK -4413 993 704 5 1247 450 0 0 0 chrX 86832290 86832340 -79817956 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 5 1247 5427 127 43 8 chrX 86832340 86832946 -79817350 - RMER16-int LTR ERVK -4703 703 76 5 1247 3227 78 0 2 chrX 86833194 86833621 -79816675 - L1_Mus1 LINE L1 0 6567 6142 5 1247 2710 95 15 0 chrX 86833621 86834011 -79816285 + L1_Mm LINE L1 5130 5525 -358 5 1247 293 212 85 153 chrX 86834107 86834296 -79816000 - RLTR43B LTR ERVK 0 375 189 5 1247 3736 130 41 53 chrX 86834469 86835160 -79815136 - L1VL2 LINE L1 -439 3176 2512 5 1247 282 29 0 0 chrX 86835160 86835195 -79815101 + (TTG)n Simple_repeat Simple_repeat 2 36 0 5 1247 3736 130 41 53 chrX 86835195 86835240 -79815056 - L1VL2 LINE L1 -1104 2511 2451 5 1247 4691 168 20 49 chrX 86835237 86836638 -79813658 - L1VL2 LINE L1 -2381 1234 2 5 1247 467 134 0 12 chrX 86836711 86836794 -79813502 + (TA)n Simple_repeat Simple_repeat 2 83 0 5 1247 970 173 27 27 chrX 86836817 86837001 -79813295 + MTB_Mm-int LTR MaLR 645 828 -270 5 1247 414 0 0 0 chrX 86837006 86837052 -79813244 + (TTA)n Simple_repeat Simple_repeat 1 46 0 5 1247 2638 125 1 8 chrX 86837071 86837502 -79812794 - Lx3B LINE L1 -101 6875 6454 5 1247 1426 96 8 46 chrX 86837528 86837789 -79812507 + MTB_Mm-int LTR MaLR 848 1098 0 5 1247 2512 109 56 23 chrX 86837789 86838183 -79812113 + MTB_Mm LTR MaLR 1 407 0 5 1247 842 258 19 9 chrX 86838236 86838447 -79811849 + B3 SINE B2 1 213 -3 5 1247 993 116 0 13 chrX 86840494 86840643 -79809653 + B1_Mm SINE Alu 1 147 0 5 1247 209 0 0 88 chrX 86840643 86840677 -79809619 + (A)n Simple_repeat Simple_repeat 1 31 0 5 1247 255 252 90 45 chrX 86840761 86841006 -79809290 - Zaphod DNA Tip100 -3061 970 715 5 1247 401 298 32 16 chrX 86841012 86841135 -79809161 - B1F SINE Alu -1 148 24 5 1247 235 230 200 31 chrX 86841177 86841307 -79808989 + Zaphod DNA Tip100 3691 3842 -189 5 1247 1009 298 29 29 chrX 86841372 86841652 -79808644 + B4A SINE B4 11 290 -2 5 1247 561 88 0 0 chrX 86841652 86841732 -79808564 + (TG)n Simple_repeat Simple_repeat 1 80 0 5 1247 351 132 0 0 chrX 86841732 86841800 -79808496 + (GA)n Simple_repeat Simple_repeat 2 69 0 5 1247 22 35 0 0 chrX 86842322 86842351 -79807945 + AT_rich Low_complexity Low_complexity 1 29 0 5 1247 30 45 0 0 chrX 86842475 86842519 -79807777 + AT_rich Low_complexity Low_complexity 1 44 0 5 1247 198 0 0 0 chrX 86842667 86842689 -79807607 + (CAAAAA)n Simple_repeat Simple_repeat 1 22 0 5 1247 308 236 169 8 chrX 86842995 86843119 -79807177 - L1M2 LINE L1 -743 5403 5260 5 1247 435 310 118 38 chrX 86843169 86843729 -79806567 - L1M2 LINE L1 -948 5192 4567 5 1247 1009 75 75 0 chrX 86843802 86843936 -79806360 - B1_Mus2 SINE Alu -2 145 2 5 1247 20464 195 42 16 chrX 86844360 86846016 -79804280 + Lx2B LINE L1 509 2327 -3559 5 1247 4570 84 14 3 chrX 86846016 86846661 -79803635 + L1_Mus3 LINE L1 5981 6632 -6 5 1247 20464 186 47 14 chrX 86846661 86850679 -79799617 + Lx2B LINE L1 2328 6570 -12 5 1247 2128 121 28 3 chrX 86850674 86850998 -79799298 + Lx2 LINE L1 6340 6671 -326 5 1247 336 288 0 0 chrX 86851988 86852068 -79798228 + ID SINE ID 4 83 -141 5 1247 270 0 0 82 chrX 86852698 86852747 -79797549 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 5 1247 189 0 0 0 chrX 86852752 86852773 -79797523 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 5 1247 999 128 0 0 chrX 86852774 86852915 -79797381 - B1_Mus1 SINE Alu -6 142 2 5 1247 320 321 0 12 chrX 86852958 86853043 -79797253 - ID_B1 SINE B4 -47 177 94 5 1247 2252 94 3 29 chrX 86853092 86853443 -79796853 - L1_Mm LINE L1 -2338 3545 3204 5 1247 2819 101 80 2 chrX 86853445 86853870 -79796426 + L1_Mus2 LINE L1 6107 6564 -2 5 1247 765 309 19 10 chrX 86853924 86854133 -79796163 - B3 SINE B2 0 216 6 5 1247 426 53 0 0 chrX 86854738 86854795 -79795501 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 1247 594 318 74 0 chrX 86855730 86855972 -79794324 - Lx8 LINE L1 -866 6607 6348 5 1247 1583 154 12 70 chrX 86855974 86856316 -79793980 + RLTRETN_Mm LTR ERVK 1 322 0 5 1247 15694 80 22 44 chrX 86856317 86858169 -79792127 + MMETn-int LTR ERVK 2 1813 -3031 5 1247 291 85 0 0 chrX 86858169 86858216 -79792080 + (CTAA)n Simple_repeat Simple_repeat 2 48 0 5 1247 15694 139 35 26 chrX 86858216 86859093 -79791203 + MMETn-int LTR ERVK 1814 3281 -2125 5 1247 14432 139 18 27 chrX 86859088 86861761 -79788535 + MMETn-int LTR ERVK 3219 7299 -107 5 1247 35 0 0 0 chrX 86861761 86861796 -79788500 + AT_rich Low_complexity Low_complexity 1 35 0 5 1247 1547 152 15 70 chrX 86861807 86862148 -79788148 + RLTRETN_Mm LTR ERVK 1 322 0 5 1247 398 273 0 0 chrX 86862148 86862236 -79788060 - Lx8 LINE L1 -1122 6351 6264 5 1247 456 315 7 59 chrX 86862256 86862399 -79787897 + B3A SINE B2 6 140 -58 5 1247 659 231 21 7 chrX 86862399 86862543 -79787753 + MT2A LTR ERVL 1 146 -387 5 1247 616 239 41 50 chrX 86862952 86863314 -79786982 + MT2A LTR ERVL 108 513 -20 5 1247 1345 91 0 5 chrX 86863933 86864120 -79786176 - B2_Mm2 SINE B2 -9 186 1 5 1247 284 253 58 63 chrX 86864183 86864373 -79785923 - Lx7 LINE L1 -20 7676 7488 5 1247 509 205 122 30 chrX 86865343 86865474 -79784822 + B1_Mur4 SINE Alu 7 149 -1 5 1247 249 33 0 0 chrX 86865474 86865504 -79784792 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 5 1247 245 316 176 42 chrX 86865773 86866011 -79784285 + MTE-int LTR MaLR 797 1066 -514 5 1247 381 87 68 68 chrX 86866641 86866715 -79783581 + ETnERV2-int LTR ERVK 7331 7404 -2 5 1247 1906 157 143 19 chrX 86866716 86867086 -79783210 + RLTR9B2 LTR ERVK 1 416 -4 5 1247 1193 251 104 13 chrX 86867217 86867600 -79782696 + Lx8 LINE L1 7054 7471 -2 5 1247 22 0 0 0 chrX 86869223 86869245 -79781051 + AT_rich Low_complexity Low_complexity 1 22 0 5 1247 424 72 0 28 chrX 86869606 86869677 -79780619 + (CAAAA)n Simple_repeat Simple_repeat 4 72 0 5 1247 201 132 0 0 chrX 86870145 86870183 -79780113 + (T)n Simple_repeat Simple_repeat 1 38 0 5 1247 523 278 73 29 chrX 86870183 86870320 -79779976 - B4A SINE B4 -68 224 82 5 1247 5745 80 3 0 chrX 86870335 86871094 -79779202 - L1_Mus2 LINE L1 -4 6562 5802 5 1247 3259 108 2 0 chrX 86871094 86871555 -79778741 + L1_Mus2 LINE L1 5339 5800 -83 5 1247 404 316 7 0 chrX 86872083 86872219 -79778077 - L1M5 LINE L1 -546 5627 5491 5 1247 4133 249 73 48 chrX 86872531 86873836 -79776460 + Lx9 LINE L1 6306 7643 -1 5 1247 367 305 49 7 chrX 86873894 86874036 -79776260 - L1VL4 LINE L1 -6015 287 140 5 1247 499 101 0 0 chrX 86874035 86874106 -79776190 + Lx LINE L1 5708 5781 -1915 5 1247 788 146 20 7 chrX 86874106 86874258 -79776038 + L1_Mus4 LINE L1 6483 6636 0 5 1247 427 170 32 11 chrX 86874258 86874281 -79776015 + Lx LINE L1 5782 5803 -1893 5 1247 462 290 19 106 chrX 86874851 86875059 -79775237 + B3A SINE B2 4 193 -5 5 1247 375 351 50 60 chrX 86875356 86875574 -79774722 - MER20 DNA MER1_type -3 216 1 5 1247 273 206 63 0 chrX 86875742 86875805 -79774491 + L1MA6 LINE L1 5899 5965 -335 5 1247 35421 30 15 7 chrX 86876075 86880993 -79769303 + L1Md_T LINE L1 638 5586 -297 5 1247 8211 47 0 0 chrX 86880993 86881989 -79768307 + L1Md_T LINE L1 5587 6582 0 5 1247 340 314 104 25 chrX 86882665 86882828 -79767468 + L1MC4a LINE L1 6696 6871 -1011 5 1247 47 82 0 0 chrX 86882957 86883067 -79767229 + AT_rich Low_complexity Low_complexity 1 110 0 5 1247 825 38 0 0 chrX 86883220 86883325 -79766971 + (CA)n Simple_repeat Simple_repeat 2 106 0 5 1247 189 0 0 0 chrX 86883325 86883345 -79766951 + (GA)n Simple_repeat Simple_repeat 2 22 0 5 1247 363 282 23 29 chrX 86883373 86883548 -79766748 - Lx7 LINE L1 -276 7420 7247 5 1247 6840 90 24 14 chrX 86883543 86884554 -79765742 + L1_Mus2 LINE L1 5546 6566 0 5 1247 1657 251 150 0 chrX 86884554 86885055 -79765241 - Lx7 LINE L1 -449 7247 6672 5 1247 1553 224 29 11 chrX 86885056 86885403 -79764893 - ORR1C1 LTR MaLR -25 353 1 5 1247 3408 230 90 28 chrX 86885407 86886694 -79763602 - Lx7 LINE L1 -1031 6665 5262 5 1247 1069 132 20 35 chrX 86886694 86886891 -79763405 - B2_Mm2 SINE B2 0 195 2 5 1247 3254 218 119 39 chrX 86886891 86887405 -79762891 - Lx7 LINE L1 -619 5261 4727 5 1247 1009 162 20 29 chrX 86887412 86887623 -79762673 + RLTR9E LTR ERVK 230 434 -3 5 1247 565 189 6 24 chrX 86887674 86887834 -79762462 - Lx7 LINE L1 -1103 4774 4615 5 1247 546 245 91 24 chrX 86888149 86888280 -79762016 - Lx8 LINE L1 -2 7471 7230 5 1247 234 176 99 66 chrX 86888280 86888371 -79761925 - RMER1C Other Other -146 1196 1103 5 1247 546 245 91 24 chrX 86888371 86888386 -79761910 - Lx8 LINE L1 -2 7229 7199 5 1247 7875 220 80 26 chrX 86888383 86890326 -79759970 - Lx7 LINE L1 -1241 4639 2578 5 1247 213 39 0 0 chrX 86890326 86890352 -79759944 + (TC)n Simple_repeat Simple_repeat 1 26 0 5 1247 7875 220 80 26 chrX 86890352 86890715 -79759581 - Lx7 LINE L1 -3303 2577 2211 5 1247 971 185 0 11 chrX 86890735 86890915 -79759381 - ORR1A4 LTR MaLR -52 277 100 5 1247 7262 51 1 0 chrX 86890986 86891886 -79758410 - L1Md_T LINE L1 -2 6580 5701 5 1247 505 208 68 48 chrX 86891862 86892069 -79758227 - Lx7 LINE L1 -3666 2214 2004 5 1247 285 131 82 0 chrX 86892062 86892123 -79758173 - Lx7 LINE L1 -4236 1644 1579 5 1247 851 267 83 15 chrX 86892109 86892508 -79757788 - Lx7 LINE L1 -6460 1268 843 5 1247 593 206 83 8 chrX 86893067 86893199 -79757097 + B1_Mus2 SINE Alu 5 146 -1 5 1247 388 295 97 37 chrX 86893226 86893525 -79756771 + L1MC4a LINE L1 7008 7324 -558 5 1247 4683 139 11 17 chrX 86893537 86894942 -79755354 + L1Md_F2 LINE L1 4985 5586 -297 5 1247 7552 72 4 7 chrX 86894943 86895940 -79754356 + L1Md_F2 LINE L1 5588 6581 -1 5 1247 474 18 0 0 chrX 86896011 86896066 -79754230 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1247 333 0 0 0 chrX 86896071 86896108 -79754188 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 1247 311 280 68 60 chrX 86896110 86896243 -79754053 + L1MEg LINE L1 921 1054 -5030 5 1247 23 0 0 0 chrX 86896763 86896786 -79753510 + AT_rich Low_complexity Low_complexity 1 23 0 5 1247 261 0 0 0 chrX 86897190 86897219 -79753077 + (GA)n Simple_repeat Simple_repeat 2 30 0 5 1247 871 306 208 49 chrX 86897228 86897637 -79752659 - MLT2B3 LTR ERVL -80 474 1 6 1247 429 301 35 7 chrX 86898287 86898431 -79751865 + MamRep605 Unknown Unknown 478 625 -251 6 1247 23 68 0 0 chrX 86898701 86898745 -79751551 + AT_rich Low_complexity Low_complexity 1 44 0 6 1247 621 306 14 10 chrX 86898936 86899144 -79751152 - B3 SINE B2 -7 209 1 6 1247 259 217 71 71 chrX 86899597 86899696 -79750600 - Arthur1 DNA Tip100 -2863 1084 986 6 1247 333 0 0 0 chrX 86899914 86899951 -79750345 + (TA)n Simple_repeat Simple_repeat 1 37 0 6 1247 21 71 0 0 chrX 86900036 86900078 -79750218 + AT_rich Low_complexity Low_complexity 1 42 0 6 1247 283 393 143 7 chrX 86900098 86900370 -79749926 - Arthur1 DNA Tip100 -3372 575 267 6 1248 228 35 0 0 chrX 86901206 86901235 -79749061 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1248 346 307 41 30 chrX 86901799 86901984 -79748312 - B3A SINE B2 -6 189 1 6 1248 666 335 45 36 chrX 86902437 86902484 -79747812 + Lx8 LINE L1 6248 6297 -1176 6 1248 901 293 101 9 chrX 86902484 86902821 -79747475 + ORR1D2 LTR MaLR 3 370 0 6 1248 666 335 45 36 chrX 86902821 86903082 -79747214 + Lx8 LINE L1 6298 6559 -914 6 1248 252 0 0 0 chrX 86903086 86903114 -79747182 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 6 1248 354 321 9 9 chrX 86903134 86903247 -79747049 - MLT1H1 LTR MaLR -151 404 292 6 1248 459 0 0 0 chrX 86903322 86903373 -79746923 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1248 196 388 24 0 chrX 86903596 86903681 -79746615 + L3 LINE CR1 4010 4096 -393 6 1248 254 283 196 0 chrX 86904631 86904723 -79745573 - ID_B1 SINE B4 -114 110 1 6 1248 291 161 0 0 chrX 86905017 86905073 -79745223 + (TA)n Simple_repeat Simple_repeat 2 57 0 6 1248 1063 279 93 36 chrX 86905488 86906121 -79744175 + L1M3 LINE L1 2302 2977 -3163 6 1248 513 0 0 0 chrX 86906121 86906178 -79744118 + (CAAAC)n Simple_repeat Simple_repeat 2 58 0 6 1248 1063 279 93 36 chrX 86906178 86906233 -79744063 + L1M3 LINE L1 2978 3029 -3111 6 1248 1720 283 68 45 chrX 86906232 86906851 -79743445 + Lx6 LINE L1 5880 6512 -948 6 1248 1497 152 74 7 chrX 86906864 86907148 -79743148 - ORR1A2 LTR MaLR 0 327 25 6 1248 513 249 145 21 chrX 86907149 86907342 -79742954 + Lx6 LINE L1 6678 6894 -566 6 1248 365 70 18 0 chrX 86907342 86907399 -79742897 + (GA)n Simple_repeat Simple_repeat 1 58 0 6 1248 409 347 20 26 chrX 86907654 86907805 -79742491 + RSINE1 SINE B4 16 165 0 6 1248 667 266 30 60 chrX 86907878 86908146 -79742150 + Lx9 LINE L1 7232 7491 -153 6 1248 227 327 29 52 chrX 86908488 86908662 -79741634 + L1M3 LINE L1 3975 4144 -1999 6 1248 25 31 0 0 chrX 86908805 86908837 -79741459 + AT_rich Low_complexity Low_complexity 1 32 0 6 1248 1244 230 48 53 chrX 86908854 86909305 -79740991 + RMER17C LTR ERVK 16 435 -523 6 1248 6279 94 26 7 chrX 86909429 86910698 -79739598 - L1Md_F2 LINE L1 -10 6572 5267 6 1248 7794 48 1 3 chrX 86910682 86911644 -79738652 - L1Md_F2 LINE L1 0 6582 5623 6 1248 17059 88 3 1 chrX 86911636 86914033 -79736263 - L1Md_F2 LINE L1 -588 5295 2893 6 1248 352 213 45 18 chrX 86914056 86914166 -79736130 + L1_Rod LINE L1 4482 4594 -1253 6 1248 27 29 0 0 chrX 86914166 86914200 -79736096 + AT_rich Low_complexity Low_complexity 1 34 0 6 1248 555 312 13 13 chrX 86914222 86914378 -79735918 - B3 SINE B2 -60 156 1 6 1248 528 279 34 124 chrX 86914875 86915023 -79735273 + L1M3 LINE L1 4641 4785 -1355 6 1248 449 231 101 17 chrX 86915023 86915142 -79735154 + B1F1 SINE Alu 5 133 -16 6 1248 528 279 34 124 chrX 86915142 86915381 -79734915 + L1M3 LINE L1 4786 4993 -1147 6 1248 255 253 13 0 chrX 86915401 86915480 -79734816 + L1M3 LINE L1 5109 5188 -955 6 1248 470 152 0 11 chrX 86915703 86915796 -79734500 + CT-rich Low_complexity Low_complexity 3 94 0 6 1248 21 57 0 0 chrX 86916125 86916160 -79734136 + AT_rich Low_complexity Low_complexity 1 35 0 6 1248 500 221 96 24 chrX 86916622 86916789 -79733507 - RLTR40 LTR ERVK -55 762 584 6 1248 303 49 0 0 chrX 86916803 86916844 -79733452 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 6 1248 436 165 11 45 chrX 86916878 86916967 -79733329 - RLTR40 LTR ERVK -225 592 507 6 1248 1576 201 134 6 chrX 86916958 86917323 -79732973 - MTC LTR MaLR -5 416 5 6 1248 1101 258 64 21 chrX 86917322 86917695 -79732601 - RLTR40 LTR ERVK -303 514 126 6 1248 281 47 23 0 chrX 86918495 86918538 -79731758 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 6 1248 304 339 84 20 chrX 86918569 86918817 -79731479 + ERVL-int LTR ERVL 4103 4479 -1278 6 1248 301 386 92 16 chrX 86919532 86919782 -79730514 + LTR16A LTR ERVL 4 272 -179 6 1248 204 327 26 26 chrX 86920926 86921039 -79729257 - MIRc SINE MIR -20 248 136 6 1248 1893 252 59 36 chrX 86921374 86921868 -79728428 - RLTR16 LTR ERVK 0 505 1 6 1248 378 0 0 0 chrX 86921910 86921952 -79728344 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1248 2531 99 6 6 chrX 86922096 86922461 -79727835 - L1_Mus3 LINE L1 -35 6603 6239 6 1248 406 309 109 14 chrX 86922790 86922928 -79727368 - B3 SINE B2 -57 159 9 6 1248 2100 97 18 30 chrX 86922929 86923258 -79727038 + IAPLTR2b LTR ERVK 1 325 -2 6 1248 10945 99 105 22 chrX 86923258 86925725 -79724571 + IAPEz-int LTR ERVK 3 2674 -3807 6 1248 8669 45 10 13 chrX 86925703 86926783 -79723513 + IAPEz-int LTR ERVK 5403 6479 -2 6 1248 2100 97 18 30 chrX 86926785 86927114 -79723182 + IAPLTR2b LTR ERVK 1 325 -2 6 1248 4922 144 96 5 chrX 86927135 86928010 -79722286 - RMER17B LTR ERVK -3 955 1 6 1248 606 242 141 5 chrX 86928082 86928281 -79722015 + URR1A DNA MER1_type 1 226 0 6 1248 21 0 0 0 chrX 86928288 86928309 -79721987 + AT_rich Low_complexity Low_complexity 1 21 0 6 1248 245 148 37 12 chrX 86928356 86928438 -79721858 + (TA)n Simple_repeat Simple_repeat 1 84 0 6 1248 378 0 0 0 chrX 86928733 86928775 -79721521 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1248 6687 103 66 1 chrX 86928922 86930031 -79720265 - L1_Mus3 LINE L1 -6 6632 5452 6 1248 5061 130 6 4 chrX 86930026 86930835 -79719461 + L1_Mus3 LINE L1 4661 5471 -412 6 1248 507 33 0 0 chrX 86931334 86931395 -79718901 + (CATA)n Simple_repeat Simple_repeat 3 63 0 6 1248 369 241 0 12 chrX 86931701 86931785 -79718511 + B2_Mm2 SINE B2 13 95 -100 6 1248 1054 321 8 78 chrX 86932299 86932812 -79717484 - RMER5 LTR ERV1 -10 524 48 6 1248 775 266 35 0 chrX 86934921 86935120 -79715176 - B3 SINE B2 -9 207 2 6 1248 697 264 18 62 chrX 86935130 86935356 -79714940 - B3 SINE B2 0 216 1 6 1248 276 411 0 0 chrX 86937179 86937291 -79713005 - PB1D10 SINE Alu 0 117 6 6 1248 29375 127 15 8 chrX 86937640 86944169 -79706127 - L1_Mus1 LINE L1 -2 6565 98 6 1248 21 57 0 0 chrX 86944274 86944309 -79705987 + AT_rich Low_complexity Low_complexity 1 35 0 6 1248 374 340 42 24 chrX 86944442 86944608 -79705688 + B4A SINE B4 6 174 -118 6 1248 1997 235 87 17 chrX 86945255 86945775 -79704521 + RLTR31B_Mm LTR ERVK 1 556 -1 6 1248 483 304 52 37 chrX 86945899 86946154 -79704142 + ORR1D2 LTR MaLR 6 255 -115 6 1248 693 289 30 5 chrX 86946135 86946333 -79703963 + ORR1D2 LTR MaLR 168 370 0 6 1248 240 86 0 0 chrX 86946699 86946734 -79703562 + (TTAA)n Simple_repeat Simple_repeat 3 37 0 6 1248 195 42 0 0 chrX 86946802 86946826 -79703470 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1248 846 312 46 49 chrX 86946933 86947196 -79703100 + B4 SINE B4 31 292 0 6 1248 3893 130 87 2 chrX 86947805 86948438 -79701858 + L1_Mus4 LINE L1 5947 6633 -3 6 1248 218 263 98 66 chrX 86948757 86948818 -79701478 + ID4 SINE ID 9 71 -12 6 1248 226 178 44 0 chrX 86948878 86948923 -79701373 - MTD LTR MaLR -2 417 371 6 1248 5245 106 6 6 chrX 86948923 86949708 -79700588 - L1Md_F2 LINE L1 -10 6572 5788 6 1248 33170 93 6 7 chrX 86949713 86955819 -79694477 - L1Md_F2 LINE L1 -5 6577 481 6 1248 245 302 24 54 chrX 86955891 86956059 -79694237 + L1M3c LINE L1 927 1089 -5052 6 1248 330 268 16 24 chrX 86956262 86956388 -79693908 + Lx2B LINE L1 6876 7000 0 6 1248 4557 121 45 15 chrX 86956637 86957345 -79692951 + RLTR22_Mur LTR ERVK 1 716 -1132 6 1248 324 0 0 0 chrX 86957345 86957381 -79692915 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1248 4557 121 45 15 chrX 86957381 86957454 -79692842 + RLTR22_Mur LTR ERVK 717 804 -1044 6 1248 319 322 51 69 chrX 86957723 86957940 -79692356 + RMER12 LTR ERVK 1110 1322 0 6 1248 654 300 86 23 chrX 86957953 86958470 -79691826 + L1M3c LINE L1 5148 5709 -667 6 1248 318 67 0 0 chrX 86958825 86958870 -79691426 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1248 244 333 37 0 chrX 86958917 86958998 -79691298 - B3 SINE B2 -38 178 95 6 1248 222 286 62 38 chrX 86959433 86959513 -79690783 - B3 SINE B2 -126 90 9 6 1248 256 270 63 0 chrX 86959738 86959801 -79690495 + RSINE1 SINE B4 61 127 -38 6 1248 3506 180 43 85 chrX 86960756 86961450 -79688846 - RLTR13C2 LTR ERVK 0 808 127 6 1248 806 68 0 48 chrX 86961450 86961574 -79688722 + L1_Mus2 LINE L1 6449 6566 0 6 1248 3506 180 43 85 chrX 86961574 86961723 -79688573 - RLTR13C2 LTR ERVK -682 126 1 6 1248 26 0 0 0 chrX 86961819 86961845 -79688451 + AT_rich Low_complexity Low_complexity 1 26 0 6 1248 25 51 0 0 chrX 86962470 86962509 -79687787 + AT_rich Low_complexity Low_complexity 1 39 0 6 1248 495 280 44 36 chrX 86962554 86962691 -79687605 - RSINE1 SINE B4 -24 141 4 6 1248 25 0 0 0 chrX 86962693 86962718 -79687578 + AT_rich Low_complexity Low_complexity 1 25 0 6 1248 1100 95 0 13 chrX 86962727 86962877 -79687419 - B1_Mus1 SINE Alu 0 148 1 6 1248 335 324 45 9 chrX 86962879 86962991 -79687305 - PB1D10 SINE Alu -1 116 1 6 1248 378 0 0 0 chrX 86963901 86963943 -79686353 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1248 461 169 0 49 chrX 86963978 86963995 -79686301 - RMER6C LTR ERVK -613 77 61 6 1248 336 48 0 0 chrX 86963995 86964037 -79686259 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1248 461 169 0 49 chrX 86964037 86964100 -79686196 - RMER6C LTR ERVK -630 60 1 6 1248 658 264 61 25 chrX 86964274 86964472 -79685824 - B3 SINE B2 -11 205 1 6 1248 608 260 98 74 chrX 86964478 86964939 -79685357 + L1M2 LINE L1 4846 5317 -826 6 1248 249 350 9 19 chrX 86965069 86965174 -79685122 + MLT1B LTR MaLR 286 389 -1 6 1248 324 337 128 91 chrX 86965603 86965923 -79684373 - MLT1F2 LTR MaLR -2 558 227 6 1248 267 368 37 22 chrX 86966124 86966260 -79684036 + B4A SINE B4 106 243 -49 6 1248 471 48 0 0 chrX 86966280 86966342 -79683954 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 1248 26 30 0 0 chrX 86966451 86966484 -79683812 + AT_rich Low_complexity Low_complexity 1 33 0 6 1248 432 0 0 0 chrX 86966702 86966750 -79683546 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 6 1248 30 0 0 0 chrX 86967169 86967199 -79683097 + AT_rich Low_complexity Low_complexity 1 30 0 6 1248 1110 321 38 81 chrX 86967252 86967738 -79682558 - Lx8 LINE L1 -6 7467 6999 6 1248 2781 52 19 3 chrX 86967738 86968104 -79682192 - L1Md_F3 LINE L1 -15 6569 6198 6 1248 1110 321 38 81 chrX 86968104 86968220 -79682076 - Lx8 LINE L1 -475 6998 6891 6 1248 307 286 30 73 chrX 86968492 86968726 -79681570 + L1MA4 LINE L1 5692 5915 -385 7 1248 347 324 0 0 chrX 86969177 86969288 -79681008 - L1MA5 LINE L1 -362 5938 5828 7 1248 526 297 221 29 chrX 86969473 86969754 -79680542 - ORR1D2 LTR MaLR -10 349 15 7 1248 275 282 14 0 chrX 86969764 86969835 -79680461 - ORR1D2-int LTR MaLR 0 1370 1299 7 1248 207 0 0 0 chrX 86969859 86969882 -79680414 + (TA)n Simple_repeat Simple_repeat 1 23 0 7 1248 441 0 0 0 chrX 86969883 86969932 -79680364 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1248 5884 147 42 19 chrX 86969932 86970997 -79679299 - Lx3B LINE L1 -13 6960 5871 7 1248 7348 146 18 18 chrX 86970997 86972299 -79677997 + Lx3B LINE L1 4583 5884 -2 7 1248 3638 278 71 37 chrX 86972299 86973549 -79676747 - ORR1D2-int LTR MaLR -77 1293 1 7 1248 2838 90 47 63 chrX 86973565 86974038 -79676258 - Lx LINE L1 -2 6652 6188 7 1248 459 318 147 28 chrX 86974038 86974365 -79675931 - ORR1D2 LTR MaLR -8 366 1 7 1248 22 0 0 0 chrX 86974404 86974426 -79675870 + AT_rich Low_complexity Low_complexity 1 22 0 7 1248 1069 65 14 0 chrX 86974578 86974717 -79675579 + B1_Mm SINE Alu 1 141 -6 7 1248 22 0 0 0 chrX 86974720 86974742 -79675554 + AT_rich Low_complexity Low_complexity 1 22 0 7 1248 297 0 0 0 chrX 86974986 86975019 -79675277 + (TA)n Simple_repeat Simple_repeat 2 34 0 7 1248 357 24 0 0 chrX 86975019 86975060 -79675236 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1248 283 359 44 0 chrX 86975070 86975198 -79675098 - B3A SINE B2 -72 144 3 7 1248 342 0 0 0 chrX 86975266 86975304 -79674992 + (TTA)n Simple_repeat Simple_repeat 3 40 0 7 1248 8827 159 16 20 chrX 86975535 86977826 -79672470 - Lx2B LINE L1 -559 6441 4173 7 1248 379 401 62 6 chrX 86977846 86978024 -79672272 - LTR33A LTR ERVL -198 322 135 7 1248 233 259 17 0 chrX 86978513 86978571 -79671725 - Lx9 LINE L1 -447 7197 7139 7 1248 684 205 12 30 chrX 86978567 86978733 -79671563 + Lx9 LINE L1 7313 7475 -169 7 1248 324 0 0 0 chrX 86978736 86978772 -79671524 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 1248 21 0 0 0 chrX 86978910 86978931 -79671365 + AT_rich Low_complexity Low_complexity 1 21 0 7 1248 2927 198 29 110 chrX 86978936 86979719 -79670577 - RMER6D LTR ERVK 0 720 1 7 1248 1012 288 40 12 chrX 86979727 86979980 -79670316 - Lx5 LINE L1 -42 7008 6749 7 1248 717 241 84 16 chrX 86979981 86980171 -79670125 - ORR1C2 LTR MaLR -11 373 171 7 1248 582 159 0 0 chrX 86980171 86980297 -79669999 + (CA)n Simple_repeat Simple_repeat 2 127 0 7 1248 294 29 0 0 chrX 86980297 86980332 -79669964 + (GA)n Simple_repeat Simple_repeat 2 36 0 7 1248 664 150 28 37 chrX 86980335 86980484 -79669812 - ORR1C2 LTR MaLR -216 162 7 7 1248 26 30 0 0 chrX 86980521 86980554 -79669742 + AT_rich Low_complexity Low_complexity 1 33 0 7 1248 719 226 193 0 chrX 86980679 86980860 -79669436 + B3 SINE B2 1 216 0 7 1248 802 208 0 0 chrX 86980990 86981139 -79669157 - B1_Mur4 SINE Alu -1 149 1 7 1248 382 387 39 25 chrX 86981589 86981793 -79668503 - MLT1E1 LTR MaLR -2 652 446 7 1248 208 186 17 17 chrX 86982024 86982084 -79668212 + GA-rich Low_complexity Low_complexity 5 64 0 7 1248 219 312 25 12 chrX 86982236 86982317 -79667979 + B4 SINE B4 6 87 -205 7 1248 4669 67 1 36 chrX 86982351 86982997 -79667299 + L1_Mm LINE L1 5045 5668 -215 7 1248 313 76 24 37 chrX 86983251 86983333 -79666963 + (CAAA)n Simple_repeat Simple_repeat 1 81 0 7 1248 2089 206 38 38 chrX 86983600 86984134 -79666162 + RLTR31_Mm LTR ERVK 1 534 -27 7 1248 7009 113 54 18 chrX 86984351 86985483 -79664813 - Lx3A LINE L1 -6 6975 5803 7 1248 1065 84 7 0 chrX 86985711 86985853 -79664443 + B1_Mm SINE Alu 3 145 -2 7 1248 297 0 0 0 chrX 86985853 86985886 -79664410 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 7 1248 22 0 0 0 chrX 86986297 86986319 -79663977 + AT_rich Low_complexity Low_complexity 1 22 0 7 1248 378 0 0 0 chrX 86986324 86986366 -79663930 + (TA)n Simple_repeat Simple_repeat 1 42 0 7 1248 3725 76 4 12 chrX 86987120 86987628 -79662668 + L1Md_F2 LINE L1 6077 6580 -2 7 1248 7288 68 15 1 chrX 86988195 86989532 -79660764 - L1Md_F2 LINE L1 0 6582 5266 7 1248 809 166 211 0 chrX 86989715 86989890 -79660406 - B3 SINE B2 -3 213 2 7 1248 918 308 82 34 chrX 86990218 86991013 -79659283 + Lx9 LINE L1 6665 7644 0 7 1248 21 57 0 0 chrX 86992224 86992259 -79658037 + AT_rich Low_complexity Low_complexity 1 35 0 7 1248 1977 142 3 6 chrX 86992388 86992700 -79657596 - RLTR10E LTR ERVK 0 311 1 7 1248 188 450 3 0 chrX 86992933 86993039 -79657257 - L2b LINE L2 -347 3072 2963 7 1248 429 328 156 36 chrX 86993114 86993390 -79656906 + RMER1B Other Other 400 708 -358 7 1248 1077 234 172 0 chrX 86993488 86993667 -79656629 + RMER1B Other Other 709 934 -132 7 1248 426 39 0 0 chrX 86993667 86993719 -79656577 + (TTTTG)n Simple_repeat Simple_repeat 2 53 0 7 1248 1077 234 172 0 chrX 86993719 86993829 -79656467 + RMER1B Other Other 935 1047 -19 7 1248 7070 115 14 13 chrX 86993880 86994945 -79655351 + Lx LINE L1 5588 6653 -1 7 1248 214 333 32 0 chrX 86995037 86995163 -79655133 + (TA)n Simple_repeat Simple_repeat 2 131 0 7 1248 356 288 6 12 chrX 86996670 86996832 -79653464 - L1_Mur3 LINE L1 -6662 1050 890 7 1248 198 207 0 0 chrX 87000165 87000223 -79650073 + (ATG)n Simple_repeat Simple_repeat 3 60 0 1 1248 408 82 0 0 chrX 87001012 87001073 -79649223 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 1248 25874 113 31 20 chrX 87001239 87006474 -79643822 - L1_Mus1 LINE L1 0 6567 1268 3 1248 6717 39 0 0 chrX 87006474 87007272 -79643024 - L1Md_T LINE L1 0 6582 5785 4 1248 25874 188 44 13 chrX 87007272 87008312 -79641984 - L1_Mus1 LINE L1 -4616 1267 194 3 1248 437 279 146 19 chrX 87008481 87008693 -79641603 - MTE-int LTR MaLR -8 1572 1334 5 1248 668 292 73 0 chrX 87008734 87008912 -79641384 + B3 SINE B2 1 191 -25 6 1248 214 184 0 0 chrX 87008915 87008953 -79641343 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 7 1248 912 151 0 0 chrX 87008954 87009133 -79641163 + (TA)n Simple_repeat Simple_repeat 2 180 0 8 1248 243 114 0 0 chrX 87009134 87009178 -79641118 + (GA)n Simple_repeat Simple_repeat 1 44 0 9 1248 270 311 22 22 chrX 87009191 87009283 -79641013 - ORR1D2 LTR MaLR -48 322 231 1 1248 608 323 9 66 chrX 87009326 87009604 -79640692 - ORR1D2 LTR MaLR -87 272 1 1 1248 1822 213 114 5 chrX 87009646 87010042 -79640254 - RMER15 LTR ERVL 0 575 137 1 1248 841 291 0 15 chrX 87010053 87010315 -79639981 - Lx6 LINE L1 -27 7433 7176 1 1248 389 297 26 26 chrX 87010326 87010478 -79639818 - RMER1C Other Other -651 691 540 1 1248 2803 267 23 36 chrX 87010477 87011363 -79638933 + RMER1C Other Other 456 1329 -13 1 1248 376 313 287 21 chrX 87011365 87011741 -79638555 - Lx6 LINE L1 -269 7191 6716 1 1248 5859 227 38 8 chrX 87011743 87013286 -79637010 - L1_Mur2 LINE L1 -37 5840 4253 1 1248 12628 155 22 13 chrX 87013282 87015886 -79634410 - L1_Mus3 LINE L1 0 6638 4007 1 1248 1966 165 6 175 chrX 87015886 87016371 -79633925 + RLTR9D LTR ERVK 1 403 0 1 1248 2716 132 0 24 chrX 87016374 87016787 -79633509 + RLTR9D LTR ERVK 1 403 0 1 1248 12628 174 7 18 chrX 87016787 87017455 -79632841 - L1_Mus3 LINE L1 -1877 4006 3356 1 1248 521 116 0 23 chrX 87017455 87017543 -79632753 - RMER17A LTR ERVK 0 751 666 1 1248 4344 85 14 2 chrX 87017543 87018121 -79632175 + LTRIS_Mus LTR ERV1 1 585 -2 2 1248 1574 268 85 44 chrX 87018121 87018473 -79631823 + MuRRS4-int LTR ERV1 6 344 -4719 2 1248 324 0 0 0 chrX 87018473 87018509 -79631787 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1248 1574 268 85 44 chrX 87018509 87018912 -79631384 + MuRRS4-int LTR ERV1 345 791 -4272 2 1248 819 168 46 0 chrX 87018989 87019162 -79631134 + MuRRS4-int LTR ERV1 1108 1288 -3402 2 1248 2803 246 26 25 chrX 87019146 87019946 -79630350 + MuRRS-int LTR ERV1 1116 1916 -3147 2 1248 5650 149 22 41 chrX 87019935 87021633 -79628663 + MuRRS-int LTR ERV1 3273 4690 0 2 1248 4411 86 7 2 chrX 87021633 87022217 -79628079 + LTRIS_Mus LTR ERV1 1 587 0 2 1248 3327 141 31 124 chrX 87022217 87022659 -79627637 - RMER17D2 LTR ERVK -82 727 319 2 1248 900 23 0 78 chrX 87022659 87022850 -79627446 + (GGAGA)n Simple_repeat Simple_repeat 1 176 0 2 1248 3327 141 31 124 chrX 87022850 87023208 -79627088 - RMER17D2 LTR ERVK -491 318 1 2 1248 13087 121 13 4 chrX 87023208 87026181 -79624115 - L1VL4 LINE L1 -554 3005 1 2 1248 2409 224 109 56 chrX 87026181 87027262 -79623034 - L1_Mur2 LINE L1 -1616 4264 3127 2 1248 19143 124 14 6 chrX 87027236 87031186 -79619110 - L1_Mus1 LINE L1 0 6567 2594 2 1248 2130 129 5 7 chrX 87031182 87031588 -79618708 - L1_Mus1 LINE L1 -4286 1597 1211 2 1248 1170 61 0 0 chrX 87031588 87031735 -79618561 - B1_Mus1 SINE Alu 0 148 2 2 19 933 157 4 132 chrX 87031735 87031852 -79618444 - L1_Mus1 LINE L1 -5415 1223 1108 2 1249 2206 226 58 42 chrX 87031820 87032760 -79617536 - L1_Mus1 LINE L1 -5519 1205 282 2 1249 3787 233 12 37 chrX 87032812 87033088 -79617208 - L1_Mur2 LINE L1 -2728 3149 2882 2 1249 2784 137 28 13 chrX 87033088 87033553 -79616743 - Lx3A LINE L1 -2 6979 6508 2 1249 3787 233 12 37 chrX 87033553 87034380 -79615916 - L1_Mur2 LINE L1 -2996 2881 2074 2 1249 438 94 0 0 chrX 87034382 87034446 -79615850 + (TG)n Simple_repeat Simple_repeat 2 65 0 3 1249 2196 182 83 0 chrX 87034448 87034844 -79615452 - RMER17A2 LTR ERVK -3 903 475 3 1249 1410 87 0 19 chrX 87034844 87035055 -79615241 - L1Md_F2 LINE L1 -477 6105 5899 3 1249 3127 79 0 16 chrX 87035055 87035504 -79614792 - L1_Mus2 LINE L1 -388 6178 5737 3 1249 3330 107 0 8 chrX 87035504 87035986 -79614310 + L1Md_F2 LINE L1 6105 6582 0 3 1249 2430 157 51 32 chrX 87035987 87036461 -79613835 - RMER17A2 LTR ERVK -423 483 1 3 1249 2670 214 40 33 chrX 87036471 87037659 -79612637 - L1_Mur2 LINE L1 -3813 2067 940 2 1249 386 275 198 52 chrX 87037916 87038108 -79612188 - RMER15 LTR ERVL -352 223 4 3 1249 432 0 0 0 chrX 87038136 87038184 -79612112 + (T)n Simple_repeat Simple_repeat 1 48 0 3 1249 1184 62 0 0 chrX 87038184 87038330 -79611966 - B1_Mm SINE Alu 0 147 2 3 1249 581 195 8 8 chrX 87038331 87038450 -79611846 - RMER15-int LTR ERVL -42 4957 4839 3 1249 500 231 42 69 chrX 87038450 87038594 -79611702 - MTC LTR MaLR 0 421 282 3 1249 324 284 138 2 chrX 87039008 87039121 -79611175 - MTC LTR MaLR -154 267 125 3 1249 1208 281 45 23 chrX 87039122 87039562 -79610734 - RMER15-int LTR ERVL -402 4597 4148 3 1249 6855 192 10 7 chrX 87039601 87041131 -79609165 - Lx2B LINE L1 0 7000 5468 3 1249 2066 294 24 17 chrX 87041338 87042036 -79608260 - RMER15-int LTR ERVL -2755 2244 1542 3 1249 1147 256 9 74 chrX 87042035 87042373 -79607923 - RMER15-int LTR ERVL -4664 335 20 3 1249 2664 209 51 4 chrX 87042397 87042946 -79607350 - RMER15 LTR ERVL 0 575 1 3 1249 2178 295 72 76 chrX 87042946 87044019 -79606277 - ORR1D2-int LTR MaLR -40 1330 263 4 1249 405 310 0 10 chrX 87044029 87044130 -79606166 - RMER6D LTR ERVK -4 716 617 4 1249 242 56 28 0 chrX 87044130 87044166 -79606130 + (TCCC)n Simple_repeat Simple_repeat 3 39 0 4 1249 1068 69 21 0 chrX 87044198 87044343 -79605953 - B1_Mus1 SINE Alu 0 148 1 4 1249 742 248 101 19 chrX 87044349 87044616 -79605680 - RMER6D LTR ERVK -383 337 49 4 1249 540 319 35 104 chrX 87044549 87044702 -79605594 - ORR1D2-int LTR MaLR -1069 301 175 4 1249 1487 229 11 29 chrX 87044702 87045080 -79605216 - ORR1D1 LTR MaLR -3 371 1 4 1249 540 319 35 104 chrX 87045080 87045244 -79605052 - ORR1D2-int LTR MaLR -1196 174 6 4 1249 464 375 69 12 chrX 87045247 87045493 -79604803 - ORR1D2 LTR MaLR -1 369 110 4 1249 462 288 69 45 chrX 87045515 87045762 -79604534 - Lx5 LINE L1 -4 7046 6794 4 1249 7109 175 84 27 chrX 87045765 87047412 -79602884 - L1_Mur2 LINE L1 -735 5142 3402 4 1249 23 0 0 0 chrX 87047503 87047526 -79602770 + AT_rich Low_complexity Low_complexity 1 23 0 4 1249 180 0 0 0 chrX 87047907 87047927 -79602369 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1249 3251 38 8 0 chrX 87048528 87048919 -79601377 - L1Md_F2 LINE L1 0 6582 6189 4 1249 204 222 19 0 chrX 87049524 87049578 -79600718 + CT-rich Low_complexity Low_complexity 2 56 0 5 1249 1205 164 44 7 chrX 87052697 87052967 -79597329 - L1_Mur2 LINE L1 -3444 2433 2154 5 1249 474 18 0 0 chrX 87052969 87053024 -79597272 + (TA)n Simple_repeat Simple_repeat 1 55 0 5 1249 18981 152 12 39 chrX 87053032 87059388 -79590908 - L1_Mus2 LINE L1 0 6566 395 5 1249 1102 192 66 23 chrX 87059479 87059735 -79590561 - MT2C_Mm LTR ERVL 0 475 209 5 1249 1171 175 5 0 chrX 87059735 87059958 -79590338 - L1_Mur2 LINE L1 -2299 3578 3355 5 1249 303 28 0 0 chrX 87060351 87060387 -79589909 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1249 310 242 33 8 chrX 87060387 87060508 -79589788 + Lx9 LINE L1 7520 7643 -1 5 1249 25 51 0 0 chrX 87060510 87060549 -79589747 + AT_rich Low_complexity Low_complexity 1 39 0 5 1249 187 268 0 67 chrX 87060817 87060877 -79589419 + L4 LINE RTE 324 379 -1650 5 1249 1811 136 86 0 chrX 87061116 87061417 -79588879 - ORR1A2 LTR MaLR 0 327 1 6 1249 274 93 68 23 chrX 87061546 87061634 -79588662 + (TA)n Simple_repeat Simple_repeat 2 93 0 6 1249 879 304 95 10 chrX 87062256 87062552 -79587744 + MTE2b LTR MaLR 17 337 -42 6 1249 414 0 0 0 chrX 87062584 87062630 -79587666 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1249 537 246 39 54 chrX 87062646 87062775 -79587521 - B1_Mur1 SINE Alu -22 127 1 6 1249 240 226 102 161 chrX 87062659 87062796 -79587500 - MT2B LTR ERVL -337 264 136 6 1249 244 409 38 51 chrX 87063264 87063421 -79586875 + LTR78 LTR ERV1 249 403 -901 6 1249 375 45 45 0 chrX 87063862 87063928 -79586368 + (CAAAAA)n Simple_repeat Simple_repeat 2 70 0 6 1249 227 306 14 0 chrX 87063941 87064013 -79586283 - ORR1B1 LTR MaLR 0 394 322 6 1249 2904 154 31 6 chrX 87064025 87064882 -79585414 - L1_Mur1 LINE L1 -4091 1795 913 6 1249 6714 146 45 1 chrX 87064883 87066048 -79584248 + Lx3C LINE L1 5760 6975 -1 7 1249 1538 202 28 84 chrX 87066068 87066425 -79583871 - ORR1B1 LTR MaLR -57 337 1 6 1249 622 72 0 0 chrX 87067336 87067419 -79582877 + LTRIS_Mm LTR ERV1 400 482 0 7 1249 404 105 0 0 chrX 87067419 87067476 -79582820 - L1_Mus3 LINE L1 -758 5880 5824 7 1249 17221 147 108 97 chrX 87067474 87067992 -79582304 - L1_Mus3 LINE L1 -380 5503 5012 7 1249 1857 156 16 96 chrX 87067992 87068072 -79582224 + RLTR9C LTR ERVK 1 75 -318 7 1249 237 33 0 0 chrX 87068072 87068102 -79582194 + (TCC)n Simple_repeat Simple_repeat 2 31 0 7 1249 1857 156 16 96 chrX 87068102 87068447 -79581849 + RLTR9C LTR ERVK 76 392 -1 7 1249 17221 151 93 82 chrX 87068447 87072974 -79577322 - L1_Mus3 LINE L1 -872 5011 400 7 1249 2752 186 90 22 chrX 87073001 87073291 -79577005 - RMER6C LTR ERVK -2 688 371 7 1249 506 16 16 0 chrX 87073291 87073354 -79576942 + (TC)n Simple_repeat Simple_repeat 1 64 0 7 1249 510 61 0 0 chrX 87073354 87073420 -79576876 + (TA)n Simple_repeat Simple_repeat 2 67 0 7 1249 2752 186 90 22 chrX 87073420 87073772 -79576524 - RMER6C LTR ERVK -320 370 2 7 1249 247 244 6 0 chrX 87074323 87074384 -79575912 + MIRm SINE MIR 104 166 -102 7 1249 218 274 122 31 chrX 87074387 87074485 -79575811 + B1F1 SINE Alu 1 107 -13 7 1249 786 204 53 23 chrX 87074701 87074872 -79575424 - RMER6C LTR ERVK -514 176 1 8 1249 2192 141 40 88 chrX 87075363 87075839 -79574457 - RLTR13D6 LTR ERVK 0 902 450 8 1249 1765 140 20 17 chrX 87075821 87076118 -79574178 - RLTR13D6 LTR ERVK -604 298 1 8 1249 2906 173 21 0 chrX 87076726 87077259 -79573037 + L1_Mur2 LINE L1 4338 4881 -996 8 1249 277 62 42 0 chrX 87077987 87078035 -79572261 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 8 1249 22 70 0 0 chrX 87078139 87078182 -79572114 + AT_rich Low_complexity Low_complexity 1 43 0 8 1249 289 322 73 86 chrX 87078281 87078515 -79571781 + RLTR25A LTR ERVK 1 231 -872 8 1249 27 29 0 0 chrX 87079020 87079054 -79571242 + AT_rich Low_complexity Low_complexity 1 34 0 8 1249 21 89 0 0 chrX 87079244 87079300 -79570996 + AT_rich Low_complexity Low_complexity 1 56 0 8 1249 2204 149 80 29 chrX 87079980 87080434 -79569862 - BGLII_B LTR ERVK -5 436 1 8 1249 1484 254 31 58 chrX 87080434 87080851 -79569445 - Lx9 LINE L1 -766 6878 6473 8 1249 32 0 0 0 chrX 87081008 87081040 -79569256 + AT_rich Low_complexity Low_complexity 1 32 0 9 1249 288 229 0 16 chrX 87081155 87081217 -79569079 + MTEb LTR MaLR 1 61 -318 9 1249 606 350 4 8 chrX 87081325 87081581 -79568715 + Lx9 LINE L1 7179 7433 -211 9 1249 483 245 0 0 chrX 87081605 87081703 -79568593 + Lx7 LINE L1 5615 5712 -1984 9 1249 593 150 7 0 chrX 87081846 87081993 -79568303 + CT-rich Low_complexity Low_complexity 1 148 0 9 1249 306 0 0 0 chrX 87081993 87082027 -79568269 + (TG)n Simple_repeat Simple_repeat 1 34 0 9 1249 195 114 0 0 chrX 87082402 87082437 -79567859 + (TAAAAA)n Simple_repeat Simple_repeat 3 37 0 9 1249 3264 97 17 11 chrX 87082734 87083212 -79567084 + RLTR45 LTR ERVK 2 482 0 9 1249 200 195 0 0 chrX 87083778 87083819 -79566477 + (ATTG)n Simple_repeat Simple_repeat 4 44 0 9 1249 499 279 79 61 chrX 87083819 87083983 -79566313 - ID_B1 SINE B4 -44 180 14 9 1249 289 58 39 0 chrX 87084355 87084407 -79565889 + (TTG)n Simple_repeat Simple_repeat 1 54 0 1 1249 897 146 7 0 chrX 87084408 87084545 -79565751 - B1_Mm SINE Alu -8 139 2 1 1249 990 115 62 11 chrX 87084564 87084740 -79565556 - L1Md_F2 LINE L1 0 6582 6398 1 1249 32080 84 3 30 chrX 87084744 87088774 -79561522 - L1Md_F2 LINE L1 -382 6200 2291 1 1249 1691 51 0 14 chrX 87088774 87088994 -79561302 - L1Md_F3 LINE L1 -11 6573 6357 1 1249 32080 128 8 41 chrX 87088994 87090932 -79559364 - L1Md_F2 LINE L1 -3593 2290 422 1 1249 24 67 0 0 chrX 87091093 87091138 -79559158 + AT_rich Low_complexity Low_complexity 1 45 0 1 1249 1759 166 3 64 chrX 87091307 87091649 -79558647 - ORR1A4 LTR MaLR -8 321 1 1 1249 441 54 0 0 chrX 87092485 87092541 -79557755 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 1249 1897 181 73 15 chrX 87092841 87093239 -79557057 - MTC LTR MaLR 0 421 1 1 1249 307 149 539 0 chrX 87093258 87093347 -79556949 - RMER6A LTR ERVK -605 151 15 1 1249 270 162 0 0 chrX 87093352 87093426 -79556870 + CT-rich Low_complexity Low_complexity 1 74 0 1 1249 2797 58 63 0 chrX 87093427 87093792 -79556504 + RLTR10 LTR ERVK 1 388 -2 1 1249 1237 72 48 0 chrX 87093794 87093960 -79556336 + MMERVK10C-int LTR ERVK 1 174 -7407 1 1249 687 78 29 0 chrX 87093963 87094066 -79556230 + RLTR10A LTR ERVK 306 411 0 1 1249 2992 47 18 2 chrX 87094066 87094540 -79555756 + RLTR10-int LTR ERVK 302 857 -1130 1 1249 560 292 40 27 chrX 87094514 87094662 -79555634 + ETnERV2-int LTR ERVK 7053 7202 -204 1 1249 1247 53 0 0 chrX 87095055 87095205 -79555091 + RLTR10-int LTR ERVK 843 992 -995 1 1249 590 308 12 12 chrX 87095400 87095653 -79554643 + RLTR10-int LTR ERVK 1342 1594 -5987 1 1249 255 218 0 0 chrX 87095688 87095743 -79554553 + RLTR10-int LTR ERVK 2355 2409 -5172 1 1249 8353 47 0 2 chrX 87095735 87096734 -79553562 + RLTR10-int LTR ERVK 990 1986 -1 1 1249 2873 53 20 38 chrX 87096734 87097129 -79553167 + RLTR10 LTR ERVK 1 388 -2 1 1249 1810 216 142 50 chrX 87097445 87097860 -79552436 - RMER6C LTR ERVK -8 682 283 1 1249 2885 178 83 145 chrX 87097860 87098826 -79551470 - RMER17A2 LTR ERVK 0 906 1 1 1249 1810 214 173 40 chrX 87098826 87098985 -79551311 - RMER6C LTR ERVK -408 282 8 1 1249 22 0 0 0 chrX 87099097 87099119 -79551177 + AT_rich Low_complexity Low_complexity 1 22 0 1 1249 183 220 0 0 chrX 87099480 87099530 -79550766 + CT-rich Low_complexity Low_complexity 2 51 0 1 1249 291 356 0 0 chrX 87099620 87099707 -79550589 - PB1D10 SINE Alu -21 96 10 1 1249 557 164 188 11 chrX 87099988 87100245 -79550051 - ORR1B2 LTR MaLR -9 358 1 1 1249 981 104 0 0 chrX 87100733 87100867 -79549429 + B1_Mus1 SINE Alu 3 136 -12 1 1249 302 0 26 0 chrX 87100868 87100906 -79549390 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1249 356 318 0 0 chrX 87100918 87101025 -79549271 + PB1D10 SINE Alu 2 108 -9 1 1249 334 196 10 10 chrX 87101321 87101419 -79548877 + CT-rich Low_complexity Low_complexity 3 100 0 1 1249 633 386 42 24 chrX 87102263 87102550 -79547746 - B4A SINE B4 0 292 1 1 1249 337 350 0 0 chrX 87102829 87102909 -79547387 - RSINE1 SINE B4 0 165 86 1 1249 230 306 0 27 chrX 87103230 87103304 -79546992 - LTR86A1 LTR ERVL -3 510 439 1 1249 365 176 58 12 chrX 87103241 87103327 -79546969 - RLTR46 LTR ERVK -189 131 42 1 1249 767 80 27 0 chrX 87103336 87103448 -79546848 - MMERVK10C-int LTR ERVK 0 7680 7566 1 1249 2506 67 0 6 chrX 87103470 87103784 -79546512 - RLTR10-int LTR ERVK -190 1797 1486 1 1249 3159 154 2 86 chrX 87103786 87104426 -79545870 - MMERVK10C-int LTR ERVK -147 7434 6849 1 1249 1787 112 31 27 chrX 87104445 87104743 -79545553 - MMERVK10C-int LTR ERVK -1882 5699 5414 1 1249 753 205 6 6 chrX 87104743 87104900 -79545396 - MMERVK10C-int LTR ERVK -6039 503 347 1 1249 561 106 0 34 chrX 87104894 87104982 -79545314 - MMERVK10C-int LTR ERVK -6365 177 93 1 1249 836 130 6 18 chrX 87104982 87105146 -79545150 + CT-rich Low_complexity Low_complexity 3 164 0 1 1249 643 226 58 29 chrX 87105157 87105362 -79544934 - IAPEY3-int LTR ERVK -6935 745 535 1 1249 1212 207 32 39 chrX 87105555 87105836 -79544460 - RLTR46 LTR ERVK -6 314 36 1 1249 474 293 8 54 chrX 87105876 87106006 -79544290 + ORR1D2 LTR MaLR 9 132 -238 1 1249 1710 187 22 9 chrX 87106026 87106350 -79543946 + ORR1B2 LTR MaLR 32 359 -8 1 1249 23 0 0 0 chrX 87106365 87106388 -79543908 + AT_rich Low_complexity Low_complexity 1 23 0 1 1249 847 276 139 48 chrX 87107074 87107385 -79542911 + ORR1D2 LTR MaLR 10 351 -19 1 1249 2189 213 10 0 chrX 87107385 87107802 -79542494 + MTC LTR MaLR 1 421 0 1 1249 847 276 139 48 chrX 87107802 87107821 -79542475 + ORR1D2 LTR MaLR 352 370 0 1 1249 26 30 0 0 chrX 87108164 87108197 -79542099 + AT_rich Low_complexity Low_complexity 1 33 0 1 1249 30 27 0 0 chrX 87108496 87108533 -79541763 + AT_rich Low_complexity Low_complexity 1 37 0 1 1249 628 331 16 37 chrX 87109120 87109311 -79540985 + B3 SINE B2 1 187 -29 1 1249 34 84 0 0 chrX 87109331 87109414 -79540882 + AT_rich Low_complexity Low_complexity 1 83 0 1 1249 21 36 0 0 chrX 87109660 87109688 -79540608 + AT_rich Low_complexity Low_complexity 1 28 0 1 1249 27 39 0 19 chrX 87109736 87109759 -79540537 + AT_rich Low_complexity Low_complexity 1 23 0 1 1249 3233 145 16 20 chrX 87109759 87110314 -79539982 - Lx LINE L1 -8 6646 6094 1 1249 27 39 0 19 chrX 87110314 87110342 -79539954 + AT_rich Low_complexity Low_complexity 1 28 0 1 1249 333 0 0 0 chrX 87110462 87110499 -79539797 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 1249 1148 55 0 14 chrX 87110637 87110785 -79539511 + B1_Mus2 SINE Alu 2 147 0 1 1249 243 146 0 0 chrX 87110785 87110826 -79539470 + (A)n Simple_repeat Simple_repeat 1 41 0 1 1249 2231 181 21 23 chrX 87111180 87111853 -79538443 + L1_Mur1 LINE L1 686 1476 -4410 1 1249 4999 139 8 8 chrX 87111847 87112698 -79537598 + L1_Mur1 LINE L1 1792 2642 -3244 1 1249 2780 169 55 2 chrX 87112689 87113269 -79537027 + L1_Mur1 LINE L1 3779 4389 -1497 1 1249 4210 156 48 43 chrX 87113266 87114054 -79536242 + Lx3B LINE L1 6182 6973 0 1 1249 260 321 39 103 chrX 87114186 87114419 -79535877 - RMER10A LTR ERVL -196 246 29 1 1249 581 164 8 25 chrX 87114668 87114787 -79535509 + Lx LINE L1 6526 6642 -12 1 1249 243 0 0 0 chrX 87114790 87114817 -79535479 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1249 614 304 25 6 chrX 87114941 87115103 -79535193 - RSINE1 SINE B4 0 165 1 1 1249 4408 127 88 52 chrX 87115547 87116394 -79533902 + Lx3A LINE L1 6101 6978 -3 1 1249 441 0 0 0 chrX 87116395 87116444 -79533852 + (TTA)n Simple_repeat Simple_repeat 1 49 0 1 1249 787 132 7 19 chrX 87116554 87116708 -79533588 - Lx LINE L1 0 6654 6503 1 1249 308 43 22 0 chrX 87117029 87117075 -79533221 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 1249 25 31 0 0 chrX 87117709 87117741 -79532555 + AT_rich Low_complexity Low_complexity 1 32 0 1 1249 38 68 0 0 chrX 87118119 87118192 -79532104 + AT_rich Low_complexity Low_complexity 1 73 0 1 1249 317 320 62 22 chrX 87119088 87119147 -79531149 - L1M5 LINE L1 -1950 4196 4135 1 1249 3723 145 10 14 chrX 87119147 87119770 -79530526 - Lx3B LINE L1 -2 6971 6352 1 1249 317 320 62 22 chrX 87119770 87119889 -79530407 - L1M5 LINE L1 -2012 4134 4011 1 1249 208 98 47 47 chrX 87120223 87120266 -79530030 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 1 1249 31 26 0 0 chrX 87120587 87120625 -79529671 + AT_rich Low_complexity Low_complexity 1 38 0 1 1249 269 287 152 48 chrX 87121241 87121406 -79528890 - B3A SINE B2 -16 182 1 1 1249 230 119 83 0 chrX 87122027 87122111 -79528185 + (TA)n Simple_repeat Simple_repeat 2 92 0 1 1249 345 388 52 7 chrX 87122500 87122653 -79527643 - RSINE1 SINE B4 -4 161 2 1 1249 28 0 0 0 chrX 87122780 87122808 -79527488 + AT_rich Low_complexity Low_complexity 1 28 0 1 1249 25 0 0 0 chrX 87123350 87123375 -79526921 + AT_rich Low_complexity Low_complexity 1 25 0 1 1249 10170 95 4 1 chrX 87123546 87125643 -79524653 - L1_Mus2 LINE L1 -1 6565 4462 1 1249 6813 124 3 2 chrX 87125921 87127642 -79522654 - L1_Mus2 LINE L1 0 6566 4844 1 1249 234 367 25 0 chrX 87128187 87128266 -79522030 + ID4_ SINE ID 2 82 -1 1 1249 729 188 13 40 chrX 87128292 87128442 -79521854 + B1_Mus2 SINE Alu 2 147 0 1 1249 21 0 0 0 chrX 87128445 87128466 -79521830 + AT_rich Low_complexity Low_complexity 1 21 0 1 1249 1622 27 0 0 chrX 87128469 87128655 -79521641 + B2_Mm1t SINE B2 1 186 -7 1 1249 9944 128 8 5 chrX 87129232 87130270 -79520026 - L1_Mm LINE L1 -1025 4858 3816 1 1249 3501 20 0 0 chrX 87130270 87130666 -79519630 - MTA_Mm LTR MaLR 0 396 1 1 1249 9944 128 8 5 chrX 87130666 87131231 -79519065 - L1_Mm LINE L1 -2068 3815 3251 1 1249 10473 25 7 1 chrX 87131223 87133139 -79517157 - L1Md_T LINE L1 0 6582 4657 1 1249 10138 130 21 3 chrX 87133139 87134841 -79515455 - L1_Mm LINE L1 -2606 3277 1545 1 1249 859 262 41 35 chrX 87134838 87134866 -79515430 - L1Md_F LINE L1 -5817 1172 1145 1 1249 3989 51 2 0 chrX 87134866 87135355 -79514941 - L1Md_F2 LINE L1 -11 6571 6082 1 1249 2704 213 100 25 chrX 87135355 87136052 -79514244 - L1Md_F LINE L1 -5845 1144 383 1 1249 3079 61 8 0 chrX 87136052 87136445 -79513851 - MTA_Mm LTR MaLR 0 396 1 1 1249 2704 212 101 25 chrX 87136445 87136521 -79513775 - L1Md_F LINE L1 -6137 382 318 1 1249 22 0 0 0 chrX 87136592 87136614 -79513682 + AT_rich Low_complexity Low_complexity 1 22 0 1 1249 23 0 0 0 chrX 87136680 87136703 -79513593 + AT_rich Low_complexity Low_complexity 1 23 0 1 1249 227 283 18 92 chrX 87137162 87137271 -79513025 - RLTR20D LTR ERVK -9 569 469 1 1249 596 269 187 16 chrX 87137333 87137579 -79512717 - RLTR20D LTR ERVK -280 288 1 1 1249 355 227 0 0 chrX 87137697 87137763 -79512533 + ID_B1 SINE B4 92 157 -67 1 1249 304 321 18 3 chrX 87137763 87137792 -79512504 + PB1D10 SINE Alu 26 111 -16 1 1249 31784 107 14 9 chrX 87138260 87144590 -79505706 + L1Md_F2 LINE L1 208 6571 -11 1 1249 248 53 26 0 chrX 87145475 87145513 -79504783 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1249 21 36 0 0 chrX 87145943 87145971 -79504325 + AT_rich Low_complexity Low_complexity 1 28 0 1 1249 321 64 0 0 chrX 87145974 87146018 -79504278 - L1_Mm LINE L1 -760 5126 5080 1 1249 2430 47 3 0 chrX 87146018 87146319 -79503977 + L1Md_F2 LINE L1 6279 6580 -2 1 1249 540 81 0 0 chrX 87146549 87146623 -79503673 + (TC)n Simple_repeat Simple_repeat 1 74 0 1 1249 598 264 15 110 chrX 87146658 87146702 -79503594 - B3A SINE B2 -15 183 152 1 1249 474 18 0 0 chrX 87146702 87146757 -79503539 + (TTTTG)n Simple_repeat Simple_repeat 5 59 0 1 1249 1008 68 15 0 chrX 87146757 87146889 -79503407 - B1_Mus2 SINE Alu -12 135 2 1 1249 598 264 15 110 chrX 87146889 87147043 -79503253 - B3A SINE B2 -47 151 4 1 1249 752 122 36 0 chrX 87147182 87147321 -79502975 - L1_Mus3 LINE L1 -12 6626 6483 1 1249 300 158 0 0 chrX 87147321 87147378 -79502918 + (TGG)n Simple_repeat Simple_repeat 1 57 0 1 1249 3336 199 44 4 chrX 87147739 87148419 -79501877 - Lx LINE L1 0 6654 5948 1 1249 5811 171 8 2 chrX 87148419 87149561 -79500735 + Lx2 LINE L1 4797 5946 -1051 1 1249 294 303 72 48 chrX 87149771 87149979 -79500317 - L1MA4 LINE L1 -379 5921 5709 2 1249 227 330 61 18 chrX 87150013 87150127 -79500169 - RLTR9B LTR ERVK -35 402 284 2 1249 1273 149 248 19 chrX 87151143 87151514 -79498782 - RMER16-int LTR ERVK -4771 635 180 2 1249 2552 313 52 54 chrX 87151577 87152428 -79497868 - ETnERV2-int LTR ERVK -1339 6067 5288 2 1249 716 104 35 0 chrX 87152428 87152543 -79497753 - L1_Mus2 LINE L1 0 6566 6448 2 1249 2552 322 45 19 chrX 87152543 87153039 -79497257 - ETnERV2-int LTR ERVK -2119 5287 4772 2 1249 2258 132 43 3 chrX 87153045 87153499 -79496797 + Lx LINE L1 5454 5922 -732 2 1249 842 143 78 0 chrX 87153499 87153653 -79496643 + Lx LINE L1 6483 6648 -6 2 1249 957 354 34 24 chrX 87153773 87154364 -79495932 - ETnERV-int LTR ERVK -1917 1397 801 2 1249 365 196 0 0 chrX 87156171 87156227 -79494069 - Lx7 LINE L1 -1208 6488 6433 2 1249 999 188 35 5 chrX 87156226 87156424 -79493872 + L1_Mur3 LINE L1 4993 5196 -684 2 1249 2241 234 34 11 chrX 87156435 87156991 -79493305 - Lx7 LINE L1 -114 5766 5198 2 1249 5028 203 16 43 chrX 87156989 87158012 -79492284 + Lx4A LINE L1 6061 7055 -3 2 1249 21 0 0 0 chrX 87158012 87158033 -79492263 + AT_rich Low_complexity Low_complexity 1 21 0 2 1249 5918 207 102 144 chrX 87158047 87158169 -79492127 + L1Md_A LINE L1 3356 3484 -2393 2 1249 215 0 67 0 chrX 87158169 87158199 -79492097 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 2 1249 5918 207 102 144 chrX 87158199 87158416 -79491880 + L1Md_A LINE L1 3485 3701 -2176 2 1249 3233 164 30 8 chrX 87158416 87159011 -79491285 + Lx3B LINE L1 6364 6971 -2 2 1249 5918 207 102 144 chrX 87159011 87159590 -79490706 + L1Md_A LINE L1 3702 4272 -1605 2 1249 450 0 0 0 chrX 87159590 87159640 -79490656 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1249 8618 69 31 44 chrX 87159640 87159715 -79490581 + L1Md_A LINE L1 4273 4359 -1524 2 1249 966 250 18 42 chrX 87159715 87159999 -79490297 + RMER13B LTR ERVK 329 605 -303 2 1249 8618 69 31 44 chrX 87159999 87161043 -79489253 + L1Md_A LINE L1 4360 5586 -297 2 1249 8663 20 1 0 chrX 87161043 87162038 -79488258 + L1Md_A LINE L1 5587 6582 0 2 1249 453 338 111 28 chrX 87162039 87162255 -79488041 + RMER13B LTR ERVK 648 881 -27 2 1249 289 0 49 0 chrX 87162570 87162611 -79487685 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 2 156 25692 87 3 2 chrX 87162611 87164116 -79486180 + L1Md_F2 LINE L1 1977 3476 -2407 2 1250 228 67 0 0 chrX 87164116 87164146 -79486150 + (CAA)n Simple_repeat Simple_repeat 1 30 0 2 1250 25692 87 3 2 chrX 87164146 87166248 -79484048 + L1Md_F2 LINE L1 3477 5584 -299 2 1250 6938 96 0 12 chrX 87166248 87167242 -79483054 + L1Md_F2 LINE L1 5587 6568 -14 2 1250 704 151 26 46 chrX 87167553 87167706 -79482590 + RMER17A-int LTR ERVK 842 991 -737 2 1250 503 212 24 41 chrX 87167745 87167868 -79482428 + RMER17A-int LTR ERVK 985 1105 -623 2 1250 2288 199 66 74 chrX 87167924 87168549 -79481747 + RMER17A-int LTR ERVK 1105 1724 -4 2 1250 1528 202 21 47 chrX 87168553 87168891 -79481405 + RMER13B LTR ERVK 1 329 -579 2 1250 266 211 0 37 chrX 87168983 87169037 -79481259 + RMER13B LTR ERVK 336 387 -521 2 1250 739 0 0 21 chrX 87169052 87169145 -79481151 + (GAA)n Simple_repeat Simple_repeat 2 92 0 2 1250 5925 221 26 29 chrX 87169146 87169642 -79480654 + L1_Mur2 LINE L1 4334 4812 -1065 2 1250 968 103 14 7 chrX 87169642 87169788 -79480508 - B1_Mus1 SINE Alu 0 148 2 2 1250 5925 221 26 29 chrX 87169788 87170801 -79479495 + L1_Mur2 LINE L1 4813 5840 -37 2 1250 368 164 27 0 chrX 87170854 87170927 -79479369 + Lx6 LINE L1 6741 6815 -645 2 1250 556 247 93 0 chrX 87170945 87171095 -79479201 + RMER1C Other Other 1028 1191 -151 2 1250 625 323 64 13 chrX 87171099 87171334 -79478962 + Lx6 LINE L1 6945 7191 -269 2 1250 3127 275 41 16 chrX 87171330 87172229 -79478067 - RMER1C Other Other -2 1340 419 2 1250 658 340 0 0 chrX 87172241 87172441 -79477855 + RMER1C Other Other 554 753 -589 2 1250 394 323 61 25 chrX 87172529 87172726 -79477570 + B3 SINE B2 1 204 -12 2 1250 241 89 22 22 chrX 87172759 87172805 -79477491 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1250 21 36 0 0 chrX 87172806 87172834 -79477462 + AT_rich Low_complexity Low_complexity 1 28 0 2 1250 254 169 15 0 chrX 87172959 87173024 -79477272 + GA-rich Low_complexity Low_complexity 1 66 0 2 1250 701 177 0 26 chrX 87173106 87173257 -79477039 - L1Md_F2 LINE L1 0 6582 6436 2 1250 1383 177 73 14 chrX 87173401 87173687 -79476609 - RMER15 LTR ERVL 0 575 273 2 1250 581 280 125 5 chrX 87173739 87173947 -79476349 + MTE-int LTR MaLR 1343 1575 -5 2 1250 870 333 47 16 chrX 87173968 87174285 -79476011 + MTEa LTR MaLR 39 365 -14 2 1250 214 273 0 0 chrX 87174286 87174341 -79475955 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 2 1250 2997 48 5 8 chrX 87174791 87175172 -79475124 + L1Md_T LINE L1 6203 6582 0 2 1250 183 224 0 0 chrX 87175523 87175599 -79474697 + (CAT)n Simple_repeat Simple_repeat 3 78 0 2 1250 213 211 0 0 chrX 87175806 87175844 -79474452 + CT-rich Low_complexity Low_complexity 6 43 0 2 1250 315 36 53 18 chrX 87178939 87178996 -79471300 + (TAAAA)n Simple_repeat Simple_repeat 4 62 0 2 1250 1325 239 49 13 chrX 87179000 87179716 -79470580 + L1_Mur2 LINE L1 921 1558 -4319 2 1250 28 48 0 0 chrX 87179733 87179775 -79470521 + AT_rich Low_complexity Low_complexity 1 42 0 2 1250 3468 181 18 6 chrX 87181034 87181691 -79468605 + L1_Mm LINE L1 4992 5656 -227 2 1250 7526 66 10 4 chrX 87182603 87183740 -79466556 - L1Md_F2 LINE L1 0 6582 5435 2 1250 2512 91 143 139 chrX 87183786 87184296 -79466000 - RLTR1B LTR ERV1 0 512 1 2 1250 36 62 0 0 chrX 87184491 87184555 -79465741 + AT_rich Low_complexity Low_complexity 1 64 0 2 1250 27 29 0 0 chrX 87184855 87184889 -79465407 + AT_rich Low_complexity Low_complexity 1 34 0 2 1250 731 148 0 0 chrX 87185396 87185518 -79464778 + L1VL1 LINE L1 191 312 -6110 2 1250 30721 90 6 2 chrX 87185532 87190149 -79460147 + L1Md_F2 LINE L1 858 5589 -297 2 1250 7099 88 5 1 chrX 87190150 87191127 -79459169 + L1Md_F2 LINE L1 5591 6571 -14 2 1250 27 81 0 0 chrX 87191354 87191416 -79458880 + AT_rich Low_complexity Low_complexity 1 62 0 2 1250 1600 115 0 0 chrX 87191479 87191714 -79458582 + L1_Mus3 LINE L1 6046 6280 -358 2 1250 43 35 0 0 chrX 87191783 87191840 -79458456 + AT_rich Low_complexity Low_complexity 1 57 0 2 1250 24 53 0 0 chrX 87191959 87191997 -79458299 + AT_rich Low_complexity Low_complexity 1 38 0 2 1250 3287 29 0 0 chrX 87192068 87192453 -79457843 - L1Md_A LINE L1 -1 6581 6197 2 1250 225 211 0 0 chrX 87193144 87193201 -79457095 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1250 373 222 49 0 chrX 87193289 87193370 -79456926 + RMER6C LTR ERVK 27 111 -579 2 1250 469 186 20 30 chrX 87193361 87193461 -79456835 + MT2B LTR ERVL 188 286 -315 2 1250 292 200 0 18 chrX 87193443 87193499 -79456797 + B1_Mur3 SINE Alu 12 66 -83 2 1250 1583 199 12 12 chrX 87193590 87193910 -79456386 + RMER6C LTR ERVK 371 690 0 2 1250 3097 93 2 0 chrX 87194353 87194772 -79455524 + L1_Mus2 LINE L1 6147 6566 0 2 1250 32789 72 1 5 chrX 87194965 87196292 -79454004 - L1Md_F2 LINE L1 -11 6571 5236 2 1250 342 0 0 0 chrX 87196292 87196330 -79453966 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 1250 32789 103 5 15 chrX 87196330 87201195 -79449101 - L1Md_F2 LINE L1 -648 5235 217 2 1250 2420 124 31 61 chrX 87201299 87201744 -79448552 - RLTR44E LTR ERVK -20 432 1 2 1250 9323 149 13 38 chrX 87204013 87205776 -79444520 - Lx LINE L1 0 6654 4935 2 1250 971 89 6 88 chrX 87205776 87205936 -79444360 + B1_Mus2 SINE Alu 1 147 0 2 1250 9323 163 11 42 chrX 87205936 87206789 -79443507 - Lx LINE L1 -949 4934 4118 2 1250 1014 116 0 7 chrX 87206789 87206936 -79443360 - B1_Mus1 SINE Alu -2 146 1 2 1250 23 0 0 0 chrX 87206939 87206962 -79443334 + AT_rich Low_complexity Low_complexity 1 23 0 2 1250 499 250 115 111 chrX 87207064 87207316 -79442980 - ORR1B1 LTR MaLR 0 394 142 2 1250 947 198 11 33 chrX 87207293 87207476 -79442820 - RMER13A LTR ERVK -681 179 1 2 1250 1178 232 12 28 chrX 87207476 87207725 -79442571 - ORR1B1 LTR MaLR -119 275 31 2 1250 21 57 0 0 chrX 87209321 87209356 -79440940 + AT_rich Low_complexity Low_complexity 1 35 0 2 1250 1205 299 98 29 chrX 87209447 87210019 -79440277 - Lx6 LINE L1 0 7460 6503 2 1250 517 235 10 0 chrX 87210032 87210134 -79440162 - Lx6 LINE L1 -705 6345 6243 2 1250 22 70 0 0 chrX 87210141 87210184 -79440112 + AT_rich Low_complexity Low_complexity 1 43 0 2 1250 21 0 0 0 chrX 87210371 87210392 -79439904 + AT_rich Low_complexity Low_complexity 1 21 0 2 1250 468 302 73 13 chrX 87210540 87210691 -79439605 - B3A SINE B2 -38 160 1 2 1250 2173 168 5 15 chrX 87210721 87211125 -79439171 + Lx2 LINE L1 6598 6997 0 2 1250 915 152 12 6 chrX 87211273 87211439 -79438857 - L1_Mus4 LINE L1 -7 6629 6463 2 1250 6057 71 0 22 chrX 87211456 87212336 -79437960 + L1Md_F2 LINE L1 5762 6582 0 2 1250 5094 138 20 14 chrX 87212483 87213347 -79436949 + Lx3A LINE L1 6108 6976 -5 2 1250 28 95 0 0 chrX 87213384 87213468 -79436828 + AT_rich Low_complexity Low_complexity 1 84 0 2 1250 23 68 0 0 chrX 87213715 87213759 -79436537 + AT_rich Low_complexity Low_complexity 1 44 0 2 1250 31 88 0 0 chrX 87214102 87214182 -79436114 + AT_rich Low_complexity Low_complexity 1 80 0 2 1250 210 71 0 0 chrX 87214263 87214291 -79436005 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1250 21 0 0 0 chrX 87214496 87214517 -79435779 + AT_rich Low_complexity Low_complexity 1 21 0 2 1250 385 350 29 34 chrX 87215086 87215293 -79435003 - B3 SINE B2 -10 206 1 2 1250 681 302 16 16 chrX 87216074 87216266 -79434030 - B3A SINE B2 0 198 7 2 1250 26 50 0 0 chrX 87216689 87216729 -79433567 + AT_rich Low_complexity Low_complexity 1 40 0 2 1250 5672 55 0 7 chrX 87216845 87217565 -79432731 + L1Md_F2 LINE L1 5866 6580 -2 2 1250 850 259 2 23 chrX 87217689 87217948 -79432348 - Lx2B LINE L1 -2 6998 6746 2 1250 252 303 33 22 chrX 87218084 87218175 -79432121 - RLTR23 LTR ERV1 -2 428 337 2 1250 552 274 123 5 chrX 87218698 87218885 -79431411 + B3 SINE B2 1 209 -7 2 1250 22 0 0 0 chrX 87218885 87218907 -79431389 + AT_rich Low_complexity Low_complexity 1 22 0 2 1250 191 204 39 39 chrX 87218914 87218965 -79431331 + L4 LINE RTE 642 692 -1337 2 1250 307 224 117 23 chrX 87219625 87219753 -79430543 + L1M3 LINE L1 4209 4348 -1792 2 1250 574 303 65 4 chrX 87219795 87220027 -79430269 + L1M3 LINE L1 5474 5719 -581 2 1250 287 49 24 0 chrX 87220102 87220143 -79430153 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1250 264 59 0 0 chrX 87220144 87220178 -79430118 + (GA)n Simple_repeat Simple_repeat 2 35 0 2 1250 225 368 32 0 chrX 87220206 87220331 -79429965 + Lx9 LINE L1 6342 6470 -1174 2 1250 1622 304 79 40 chrX 87220361 87221132 -79429164 + Lx9 LINE L1 6636 7436 -208 2 1250 786 22 0 0 chrX 87221153 87221245 -79429051 + (TC)n Simple_repeat Simple_repeat 2 93 0 2 1250 192 40 0 0 chrX 87221245 87221269 -79429027 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1250 1084 71 0 7 chrX 87221397 87221538 -79428758 + B1_Mm SINE Alu 1 140 -7 2 1250 2772 147 7 2 chrX 87222130 87222588 -79427708 - Lx LINE L1 -3 6651 6192 3 1250 551 306 0 53 chrX 87222588 87222740 -79427556 + B3 SINE B2 39 182 -34 3 1250 438 20 0 0 chrX 87222744 87222795 -79427501 + (TC)n Simple_repeat Simple_repeat 1 51 0 3 1250 225 0 0 0 chrX 87222795 87222819 -79427477 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 1250 249 272 10 0 chrX 87222851 87222954 -79427342 + L1MDa LINE L1 1287 1390 -5243 3 1250 421 312 137 25 chrX 87223355 87223516 -79426780 - B3 SINE B2 -27 189 11 3 1250 385 250 10 0 chrX 87223520 87223620 -79426676 - L1_Mur3 LINE L1 -6827 885 785 3 1250 336 306 52 0 chrX 87225934 87226068 -79424228 + L1ME2z LINE L1 6303 6443 -1 3 1250 199 339 86 8 chrX 87226229 87226357 -79423939 + MIR SINE MIR 125 262 0 3 1250 548 282 69 0 chrX 87226648 87226779 -79423517 - RSINE1 SINE B4 -24 141 2 3 1250 482 265 44 22 chrX 87227560 87227695 -79422601 - B1_Mur1 SINE Alu -6 143 6 3 1250 663 48 0 0 chrX 87227697 87227780 -79422516 + (TA)n Simple_repeat Simple_repeat 1 83 0 3 1250 6095 45 9 5 chrX 87228411 87229175 -79421121 - L1Md_F3 LINE L1 -15 6569 5803 3 1250 4478 54 2 4 chrX 87229175 87229735 -79420561 + L1Md_F3 LINE L1 5269 5827 -56 3 1250 1117 112 0 0 chrX 87229776 87229946 -79420350 + L1_Mus1 LINE L1 6398 6567 0 3 1250 22 35 0 0 chrX 87230456 87230485 -79419811 + AT_rich Low_complexity Low_complexity 1 29 0 3 1250 1376 155 7 48 chrX 87230485 87230598 -79419698 - Lx2 LINE L1 -2 6995 6888 3 1250 5618 45 94 12 chrX 87230598 87231345 -79418951 + RLTR13C2 LTR ERVK 1 808 0 3 1250 5753 158 36 22 chrX 87231345 87232357 -79417939 - Lx2 LINE L1 -110 6887 5792 3 1250 2857 52 0 0 chrX 87232357 87232703 -79417593 - ORR1A0 LTR MaLR 0 346 1 3 1250 5753 199 35 9 chrX 87232703 87233748 -79416548 - Lx2 LINE L1 -1206 5791 4705 3 1250 623 186 7 15 chrX 87233742 87233878 -79416418 + L1_Mur1 LINE L1 3739 3873 -2013 3 1250 32598 83 8 1 chrX 87233937 87240047 -79410249 - L1Md_F2 LINE L1 -63 6519 367 3 1250 355 290 72 51 chrX 87240174 87240312 -79409984 - RLTR40 LTR ERVK -4 813 673 3 1250 11855 207 106 38 chrX 87240314 87244180 -79406116 - L1Md_F LINE L1 -1442 4444 245 3 1250 30 27 0 0 chrX 87244632 87244669 -79405627 + AT_rich Low_complexity Low_complexity 1 37 0 3 1250 960 330 36 29 chrX 87244895 87245284 -79405012 - MTE2a LTR MaLR 0 379 20 3 1250 361 288 104 64 chrX 87245299 87245548 -79404748 - L1M5 LINE L1 -1376 4770 4512 3 1250 352 258 34 0 chrX 87246188 87246277 -79404019 - MER34A LTR ERV1 -477 94 3 3 1250 3110 12 0 0 chrX 87246382 87246727 -79403569 - L1Md_T LINE L1 -209 6373 6029 3 1250 2063 8 0 0 chrX 87246727 87246963 -79403333 + L1Md_T LINE L1 6347 6582 0 3 1250 195 42 0 0 chrX 87246986 87247010 -79403286 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1250 282 236 241 19 chrX 87247645 87247753 -79402543 + B1F SINE Alu 10 141 -8 3 1250 4294 216 37 8 chrX 87247832 87248850 -79401446 - Lx4B LINE L1 -29 6971 5917 3 1250 28 0 0 0 chrX 87249011 87249039 -79401257 + AT_rich Low_complexity Low_complexity 1 28 0 3 1250 1721 174 26 5 chrX 87249268 87249598 -79400698 - Lx2 LINE L1 -35 6962 6587 3 1250 2493 62 2 133 chrX 87249599 87250044 -79400252 + RLTR10 LTR ERVK 1 387 -3 3 1250 4105 99 151 120 chrX 87250049 87250983 -79399313 + RLTR10-int LTR ERVK 1 992 -995 3 1250 579 298 34 31 chrX 87251039 87251431 -79398865 + RLTR10-int LTR ERVK 1309 1594 -5987 3 1250 8246 45 1 6 chrX 87251513 87252515 -79397781 + RLTR10-int LTR ERVK 990 1986 -1 3 1250 2373 63 49 147 chrX 87252515 87252945 -79397351 + RLTR10 LTR ERVK 1 388 -2 3 1250 39 0 0 0 chrX 87253105 87253144 -79397152 + AT_rich Low_complexity Low_complexity 1 39 0 3 1250 21 0 0 0 chrX 87253970 87253991 -79396305 + AT_rich Low_complexity Low_complexity 1 21 0 3 1250 931 259 39 9 chrX 87253996 87254226 -79396070 - Lx5 LINE L1 -26 7434 7198 3 1250 4391 100 36 18 chrX 87254267 87254988 -79395308 - RMER17A LTR ERVK -17 734 1 3 1250 7874 58 40 3 chrX 87254988 87256334 -79393962 - RMER17A-int LTR ERVK 0 1728 1 3 1250 2102 129 20 31 chrX 87256371 87257038 -79393258 - RMER17A LTR ERVK -18 733 1 3 1250 1055 273 18 27 chrX 87257040 87257434 -79392862 - Lx5 LINE L1 -574 6886 6455 3 1250 830 298 142 19 chrX 87257526 87257940 -79392356 - Lx6 LINE L1 -28 7432 6968 3 1250 259 355 0 0 chrX 87258063 87258156 -79392140 - Lx6 LINE L1 -194 7266 7174 3 1250 2008 130 12 28 chrX 87258351 87258676 -79391620 - Lx3_Mus LINE L1 -1 7008 6689 3 1250 375 256 11 0 chrX 87259037 87259127 -79391169 + Lx6 LINE L1 6954 7044 -416 3 1250 285 98 0 0 chrX 87259202 87259243 -79391053 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1250 1040 58 7 0 chrX 87259355 87259493 -79390803 - B1_Mus1 SINE Alu 0 148 10 3 1250 418 250 81 86 chrX 87259389 87259599 -79390697 - MT2B LTR ERVL -337 264 56 3 1250 189 0 0 0 chrX 87259704 87259725 -79390571 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1250 555 286 29 68 chrX 87260015 87260221 -79390075 - B3A SINE B2 0 198 1 3 1250 299 349 88 9 chrX 87261177 87261394 -79388902 - MER89 LTR ERV1 -322 237 4 3 1250 713 291 74 7 chrX 87261879 87262149 -79388147 + B4A SINE B4 2 289 -3 3 1250 234 91 0 0 chrX 87262216 87262249 -79388047 + (TC)n Simple_repeat Simple_repeat 2 34 0 3 1250 294 73 0 0 chrX 87262250 87262291 -79388005 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1250 291 354 0 12 chrX 87262844 87262924 -79387372 + ID4_ SINE ID 3 81 -2 3 1250 1205 244 144 11 chrX 87263340 87263693 -79386603 + MTD LTR MaLR 8 407 -12 3 1250 22 0 0 0 chrX 87263791 87263813 -79386483 + AT_rich Low_complexity Low_complexity 1 22 0 3 1250 2192 122 47 0 chrX 87264629 87264973 -79385323 - Lx3_Mus LINE L1 0 7009 6650 3 1250 6997 148 55 65 chrX 87264989 87266091 -79384205 - Lx3_Mus LINE L1 0 6997 5914 3 1250 186 43 0 0 chrX 87266091 87266114 -79384182 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1250 7007 96 35 11 chrX 87266114 87267220 -79383076 - Lx3_Mus LINE L1 -1087 5922 4813 3 1250 1068 99 0 0 chrX 87267210 87267362 -79382934 + Lx LINE L1 3640 3791 -2095 3 1250 534 108 0 0 chrX 87267380 87267463 -79382833 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 3 1250 232 48 48 0 chrX 87267900 87267942 -79382354 + (CAAAAA)n Simple_repeat Simple_repeat 5 48 0 3 1250 432 0 0 0 chrX 87268728 87268776 -79381520 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1250 24 0 0 0 chrX 87268848 87268872 -79381424 + AT_rich Low_complexity Low_complexity 1 24 0 3 1250 25 0 0 0 chrX 87269122 87269147 -79381149 + AT_rich Low_complexity Low_complexity 1 25 0 3 1250 6011 172 15 61 chrX 87269798 87269900 -79380396 + Lx LINE L1 4665 4725 -1152 3 1250 3197 118 8 4 chrX 87269900 87270387 -79379909 + L1_Mus3 LINE L1 6143 6631 -7 3 1250 6302 150 18 14 chrX 87270387 87271609 -79378687 + Lx LINE L1 4726 5934 -720 3 1250 3477 38 0 0 chrX 87271609 87272057 -79378239 + L1Md_T LINE L1 6160 6582 0 3 1250 2809 104 20 36 chrX 87272057 87272153 -79378143 + Lx LINE L1 5935 6019 -635 3 1250 630 115 53 15 chrX 87272153 87272285 -79378011 + Lx LINE L1 6511 6647 -7 3 1250 207 0 0 0 chrX 87272731 87272754 -79377542 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1250 320 171 25 62 chrX 87272897 87272978 -79377318 + L1_Mur1 LINE L1 672 749 -6233 3 1250 892 268 30 8 chrX 87273139 87273406 -79376890 + L1_Mur1 LINE L1 569 841 -6143 3 1250 5683 131 19 3 chrX 87273445 87274339 -79375957 + Lx2 LINE L1 5736 6643 -354 3 1250 1248 180 5 0 chrX 87274339 87274561 -79375735 + Lx2 LINE L1 6775 6997 0 3 1250 10077 142 27 10 chrX 87274566 87276419 -79373877 + L1_Mur1 LINE L1 1616 3499 -2387 3 1250 3325 117 0 15 chrX 87276417 87276945 -79373351 + L1_Mur1 LINE L1 5027 5546 -340 3 1250 1974 132 42 25 chrX 87277284 87277642 -79372654 + Lx LINE L1 6289 6652 -2 3 1250 1897 226 63 11 chrX 87277807 87278250 -79372046 + ORR1C1-int LTR MaLR 1 466 -1043 3 1250 526 303 25 65 chrX 87278239 87278440 -79371856 + B3A SINE B2 6 198 0 3 1250 1579 43 0 0 chrX 87278596 87278782 -79371514 + B2_Mm1a SINE B2 2 187 -6 3 1250 1058 157 121 5 chrX 87278802 87279001 -79371295 - URR1A DNA MER1_type 0 226 5 3 1250 304 175 0 73 chrX 87279063 87279131 -79371165 - ORR1D2 LTR MaLR -1 369 307 3 1250 258 136 0 0 chrX 87279134 87279178 -79371118 + (TTG)n Simple_repeat Simple_repeat 2 45 0 3 1250 1482 203 78 56 chrX 87279322 87279682 -79370614 + ORR1C1 LTR MaLR 11 378 0 3 1250 822 299 4 52 chrX 87279686 87279954 -79370342 + ORR1C1-int LTR MaLR 5 259 -1111 3 1250 3778 199 24 19 chrX 87279939 87280857 -79369439 + ORR1C1-int LTR MaLR 450 1509 0 3 1250 578 266 15 16 chrX 87281026 87281188 -79369108 + MTEb LTR MaLR 81 241 -138 3 1250 535 316 59 28 chrX 87281582 87281836 -79368460 - L2 LINE L2 -789 2630 2369 3 1250 2013 173 16 19 chrX 87282110 87282476 -79367820 - ORR1B2 LTR MaLR 0 367 3 3 1250 3145 162 47 31 chrX 87283289 87283901 -79366395 + Lx4A LINE L1 6437 7058 0 3 1250 589 283 20 14 chrX 87284698 87284845 -79365451 + B3A SINE B2 5 152 -46 3 1250 489 17 0 0 chrX 87285050 87285108 -79365188 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 1250 366 232 0 14 chrX 87285334 87285404 -79364892 - B4A SINE B4 -7 285 217 3 1250 5986 202 36 9 chrX 87285747 87287443 -79362853 - Lx2B LINE L1 -1 6999 5243 3 1250 1579 221 96 71 chrX 87287443 87288139 -79362157 + RMER17B LTR ERVK 1 904 -4 3 1250 2746 183 46 45 chrX 87288143 87288790 -79361506 - Lx2B LINE L1 -630 5247 4600 3 1250 2319 208 2 8 chrX 87288789 87289181 -79361115 + L1_Mur2 LINE L1 4769 5159 -718 3 1250 351 0 0 0 chrX 87289181 87289220 -79361076 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1250 2319 208 2 8 chrX 87289220 87289316 -79360980 + L1_Mur2 LINE L1 5160 5254 -623 3 1250 2592 168 4 4 chrX 87289316 87289332 -79360964 - L1VL4 LINE L1 -2209 1703 1688 3 1250 2658 152 84 0 chrX 87289332 87289786 -79360510 - Lx3B LINE L1 -3 6970 6479 3 1250 2592 192 32 23 chrX 87289786 87290771 -79359525 - L1VL4 LINE L1 -2225 1687 690 3 1250 1125 101 0 0 chrX 87291084 87291373 -79358923 + (TTTC)n Simple_repeat Simple_repeat 1 289 0 3 1250 1962 198 13 0 chrX 87291375 87291759 -79358537 - Lx LINE L1 -3 6651 6263 3 1250 23 54 0 0 chrX 87291825 87291862 -79358434 + AT_rich Low_complexity Low_complexity 1 37 0 3 1250 27 0 0 0 chrX 87292048 87292075 -79358221 + AT_rich Low_complexity Low_complexity 1 27 0 3 1250 33 66 0 0 chrX 87292098 87292159 -79358137 + AT_rich Low_complexity Low_complexity 1 61 0 3 1250 236 389 14 0 chrX 87292190 87292334 -79357962 - B1F SINE Alu -3 146 1 3 1250 258 32 0 0 chrX 87292630 87292661 -79357635 + (TTA)n Simple_repeat Simple_repeat 3 33 0 3 1250 6979 127 36 19 chrX 87292661 87293822 -79356474 - Lx3B LINE L1 -10 6963 5783 3 156 4377 68 0 0 chrX 87293826 87294381 -79355915 - L1_Mus1 LINE L1 -2 6565 6011 3 1251 2388 167 0 39 chrX 87294382 87294453 -79355843 - L1_Mur1 LINE L1 -83 5803 5735 3 1251 2536 88 0 187 chrX 87294453 87294648 -79355648 + MTB LTR MaLR 1 195 -205 3 1251 1069 116 0 0 chrX 87294648 87294794 -79355502 + B1_Mus2 SINE Alu 1 146 -1 4 1251 2536 88 0 187 chrX 87294794 87295090 -79355206 + MTB LTR MaLR 196 400 0 3 1251 2388 167 0 39 chrX 87295090 87295455 -79354841 - L1_Mur1 LINE L1 -152 5734 5384 3 1251 31650 79 3 7 chrX 87295449 87300135 -79350161 + L1Md_F2 LINE L1 918 5586 -297 4 1251 7437 75 1 4 chrX 87300136 87301120 -79349176 + L1Md_F2 LINE L1 5588 6568 -14 4 1251 551 302 74 21 chrX 87301128 87301453 -79348843 - L1M3e LINE L1 -1053 6050 5709 4 1251 371 375 14 45 chrX 87301507 87301795 -79348501 - L1M3e LINE L1 -5099 1931 1653 4 1251 389 370 75 62 chrX 87301835 87302353 -79347943 - L1M3e LINE L1 -5783 1247 723 4 1251 1241 312 56 8 chrX 87303215 87303590 -79346706 + MTD LTR MaLR 6 398 -21 4 1251 378 369 37 16 chrX 87303653 87303898 -79346398 - L1M3e LINE L1 -6748 282 33 4 1251 6158 128 37 50 chrX 87303992 87305294 -79345002 - Lx LINE L1 0 6654 5369 4 1251 370 327 9 19 chrX 87305317 87305423 -79344873 + B3A SINE B2 64 168 -30 4 1251 405 269 0 0 chrX 87305446 87305539 -79344757 + B1_Mur1 SINE Alu 49 141 -8 4 1251 1693 277 42 31 chrX 87305521 87305886 -79344410 + ORR1D2-int LTR MaLR 288 979 -391 4 1251 489 17 0 0 chrX 87305886 87305944 -79344352 + (GA)n Simple_repeat Simple_repeat 2 59 0 4 1251 1693 251 63 68 chrX 87305944 87306335 -79343961 + ORR1D2-int LTR MaLR 980 1367 -3 4 1251 1220 223 103 21 chrX 87306337 87306676 -79343620 + ORR1D2 LTR MaLR 1 367 -3 4 1251 357 24 0 0 chrX 87306860 87306902 -79343394 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1251 216 0 0 0 chrX 87306917 87306941 -79343355 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1251 282 386 40 0 chrX 87306995 87307096 -79343200 + B3A SINE B2 64 168 -30 4 1251 337 162 14 29 chrX 87308226 87308296 -79342000 - ORR1C2 LTR MaLR -2 376 308 4 1251 617 274 0 50 chrX 87309358 87309519 -79340777 - ORR1C2 LTR MaLR -57 327 175 4 1251 365 151 0 11 chrX 87309520 87309607 -79340689 + GA-rich Low_complexity Low_complexity 1 86 0 4 1251 694 239 52 11 chrX 87309611 87309809 -79340487 - ORR1C2 LTR MaLR -188 190 1 4 1251 207 69 0 0 chrX 87310629 87310658 -79339638 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1251 272 296 35 58 chrX 87310757 87310929 -79339367 - Lx8 LINE L1 -2 7471 7304 4 1251 557 323 45 91 chrX 87312357 87312643 -79337653 + B4A SINE B4 19 291 -1 4 1251 500 89 13 0 chrX 87312670 87312749 -79337547 + (CA)n Simple_repeat Simple_repeat 1 80 0 4 1251 212 130 22 0 chrX 87312750 87312796 -79337500 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 4 1251 22 0 0 0 chrX 87313790 87313812 -79336484 + AT_rich Low_complexity Low_complexity 1 22 0 4 1251 376 365 40 62 chrX 87313922 87314059 -79336237 - MER77 LTR ERVL 0 607 473 4 1251 2690 87 73 13 chrX 87314059 87314265 -79336031 - BGLII_Mus LTR ERVK -1 421 217 4 1251 414 0 0 0 chrX 87314265 87314311 -79335985 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 1251 2690 87 73 13 chrX 87314311 87314501 -79335795 - BGLII_Mus LTR ERVK -206 216 3 4 1251 376 365 40 62 chrX 87314501 87314588 -79335708 - MER77 LTR ERVL -135 472 388 4 1251 198 91 0 0 chrX 87315211 87315244 -79335052 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 1251 242 333 52 0 chrX 87315286 87315382 -79334914 - MER77 LTR ERVL -311 296 196 4 1251 2307 226 97 30 chrX 87316288 87317022 -79333274 + L1_Mus2 LINE L1 409 1191 -5425 4 1251 30977 88 3 5 chrX 87317025 87322310 -79327986 + L1Md_F2 LINE L1 311 5585 -298 4 1251 6793 59 52 65 chrX 87322311 87323312 -79326984 + L1Md_F2 LINE L1 5587 6574 -8 4 1251 27889 126 8 19 chrX 87323335 87328354 -79321942 + L1_Mus2 LINE L1 1174 6130 -436 4 1251 4660 119 27 1 chrX 87328354 87329059 -79321237 + Lx3A LINE L1 6252 6974 -7 4 1251 7778 51 14 0 chrX 87329406 87330390 -79319906 + L1Md_F3 LINE L1 5587 6584 0 4 1251 851 283 15 5 chrX 87330505 87330711 -79319585 - B3 SINE B2 0 216 9 4 1251 280 284 17 17 chrX 87330854 87330972 -79319324 + Lx8 LINE L1 5810 5927 -1546 4 1251 624 369 92 19 chrX 87330990 87331460 -79318836 + Lx8 LINE L1 6827 7330 -143 4 1251 304 223 104 21 chrX 87331993 87332089 -79318207 - RLTR16 LTR ERVK 0 505 402 4 1251 438 108 0 0 chrX 87332098 87332163 -79318133 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1251 809 229 58 71 chrX 87332198 87332438 -79317858 - RLTR20D LTR ERVK -331 237 1 4 1251 970 255 0 0 chrX 87332496 87332692 -79317604 - B3 SINE B2 0 216 21 4 1251 1550 219 26 24 chrX 87332819 87333202 -79317094 - ORR1C2 LTR MaLR 0 384 1 4 1251 2833 99 0 3 chrX 87333784 87334168 -79316128 - L1_Mus2 LINE L1 -84 6482 6100 4 1251 2603 138 2 49 chrX 87334492 87334965 -79315331 + MMVL30-int LTR ERV1 772 1222 -2476 4 1251 5019 114 22 12 chrX 87334963 87335770 -79314526 + MMVL30-int LTR ERV1 1525 2654 -2409 4 1251 1786 239 70 57 chrX 87335928 87336783 -79313513 + MMVL30-int LTR ERV1 2875 3118 -580 4 1251 305 71 0 0 chrX 87336783 87336825 -79313471 - L1Md_F LINE L1 -1480 4403 4362 4 1251 12214 99 24 14 chrX 87336825 87339266 -79311030 - L1Md_F LINE L1 -2878 3005 535 4 1251 310 104 0 0 chrX 87339268 87339316 -79310980 + MMVL30-int LTR ERV1 3252 3299 0 4 1251 2599 147 40 83 chrX 87339316 87339821 -79310475 + RLTR1C LTR ERV1 1 483 -20 4 1251 638 146 28 0 chrX 87339821 87339930 -79310366 - L1_Mm LINE L1 -2310 5572 5436 4 1251 10195 122 12 20 chrX 87339927 87341653 -79308643 + MusHAL1 LINE L1 473 2184 -528 4 1251 3710 188 35 17 chrX 87341653 87342374 -79307922 - RLTR25B LTR ERVK -290 738 5 4 1251 1361 58 0 0 chrX 87342670 87342842 -79307454 - L1_Mus3 LINE L1 -805 5833 5662 4 1251 3424 93 10 25 chrX 87342842 87343351 -79306945 + L1_Mus3 LINE L1 6138 6638 0 4 1251 211 239 14 14 chrX 87343752 87343824 -79306472 + (CAAA)n Simple_repeat Simple_repeat 2 73 0 4 1251 289 429 8 60 chrX 87343951 87344219 -79306077 - MER77 LTR ERVL -338 269 16 4 1251 276 30 0 0 chrX 87344251 87344284 -79306012 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1251 1904 204 18 18 chrX 87344449 87344829 -79305467 - ORR1C2 LTR MaLR -4 380 1 4 1251 306 0 0 0 chrX 87345759 87345793 -79304503 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 4 1251 360 0 0 0 chrX 87345793 87345833 -79304463 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 1251 355 400 22 0 chrX 87346147 87346282 -79304014 - B1F SINE Alu -2 147 10 4 1251 248 335 51 93 chrX 87346285 87346499 -79303797 - MER77 LTR ERVL -37 570 366 4 1251 1625 261 88 107 chrX 87346530 87347079 -79303217 - RLTR40 LTR ERVK -32 785 285 4 1251 420 20 0 0 chrX 87347079 87347128 -79303168 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1251 1625 261 88 107 chrX 87347128 87347240 -79303056 - RLTR40 LTR ERVK -533 284 177 4 1251 1389 232 44 8 chrX 87347240 87347601 -79302695 - ORR1D1 LTR MaLR 0 374 1 4 1251 1625 261 88 107 chrX 87347601 87347720 -79302576 - RLTR40 LTR ERVK -641 176 19 4 1251 26 113 0 0 chrX 87348196 87348320 -79301976 + AT_rich Low_complexity Low_complexity 1 124 0 4 1251 2604 205 35 58 chrX 87348484 87349502 -79300794 - MMETn-int LTR ERVK -2004 3402 2371 4 1251 369 154 0 15 chrX 87349562 87349628 -79300668 - MMETn-int LTR ERVK -4196 1210 1146 4 1251 1603 170 87 106 chrX 87349628 87350043 -79300253 + RLTR9E LTR ERVK 1 407 -2 4 1251 12601 109 3 2 chrX 87350045 87352632 -79297664 + L1_Mus1 LINE L1 3977 6566 -1 4 1251 6702 133 16 8 chrX 87352658 87354111 -79296185 + L1_Mus3 LINE L1 5179 6638 0 4 1251 4884 152 33 30 chrX 87355302 87356173 -79294123 - Lx2A1 LINE L1 -288 6720 5847 4 1251 1819 137 0 0 chrX 87356173 87356465 -79293831 + Lx2A1 LINE L1 6702 6993 -15 4 1251 365 0 22 0 chrX 87356465 87356510 -79293786 + (TAA)n Simple_repeat Simple_repeat 1 46 0 4 1251 380 367 43 38 chrX 87356880 87357064 -79293232 - MER5A DNA MER1_type -2 187 3 4 1251 410 151 38 0 chrX 87357253 87357359 -79292937 + (TA)n Simple_repeat Simple_repeat 1 110 0 4 1251 250 204 41 0 chrX 87357417 87357466 -79292830 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 4 1251 420 135 0 0 chrX 87357467 87357541 -79292755 + (TA)n Simple_repeat Simple_repeat 1 74 0 4 1251 396 0 0 0 chrX 87357950 87357994 -79292302 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 4 1251 585 218 232 17 chrX 87358607 87358784 -79291512 + B3 SINE B2 2 216 0 4 1251 516 281 8 16 chrX 87359073 87359196 -79291100 + B1_Mus2 SINE Alu 1 122 -25 4 1251 337 306 22 29 chrX 87359196 87359209 -79291087 + ID_B1 SINE B4 82 216 -8 4 1251 460 341 36 82 chrX 87359460 87359802 -79290494 + MLT1B LTR MaLR 1 340 -50 4 1251 25 0 0 0 chrX 87360086 87360111 -79290185 + AT_rich Low_complexity Low_complexity 1 25 0 4 1251 8139 22 8 0 chrX 87361116 87362038 -79288258 - RLTR13B3 LTR ERVK 0 929 1 4 1251 459 314 115 16 chrX 87362142 87362385 -79287911 + Lx7 LINE L1 6891 7158 -315 4 1251 2735 70 0 0 chrX 87362416 87362758 -79287538 - L1_Mus1 LINE L1 -132 6435 6094 4 1251 285 82 38 5 chrX 87362736 87362807 -79287489 + L1_Mus1 LINE L1 6502 6578 -4 4 1251 1601 210 78 31 chrX 87362858 87363271 -79287025 + RMER10A LTR ERVL 11 442 0 4 1251 573 316 35 55 chrX 87363632 87363833 -79286463 + B3A SINE B2 2 198 0 4 1251 21 71 0 0 chrX 87363887 87363929 -79286367 + AT_rich Low_complexity Low_complexity 1 42 0 4 1251 276 132 26 128 chrX 87364142 87364220 -79286076 - L1MEf LINE L1 -4586 2047 1968 4 1251 583 312 94 44 chrX 87364229 87364527 -79285769 + MTE-int LTR MaLR 455 767 -813 4 1251 335 375 174 22 chrX 87364527 87364802 -79285494 + MTE-int LTR MaLR 659 975 -395 4 1251 2210 171 99 34 chrX 87364965 87365039 -79285257 - RLTR24 LTR ERV1 0 529 429 4 1251 414 0 0 0 chrX 87365039 87365085 -79285211 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1251 2210 171 99 34 chrX 87365085 87365507 -79284789 - RLTR24 LTR ERV1 -101 428 2 4 1251 5049 109 23 11 chrX 87365526 87366306 -79283990 - L1_Mus1 LINE L1 0 6567 5779 4 1251 5491 78 1 17 chrX 87366295 87367042 -79283254 - L1Md_F2 LINE L1 -3 6579 5845 4 1251 9004 128 4 3 chrX 87367042 87368505 -79281791 - L1_Mm LINE L1 -2419 3464 2001 4 1251 11327 108 16 8 chrX 87368498 87370974 -79279322 - L1Md_F2 LINE L1 -4 6578 4091 4 1251 2335 39 6 284 chrX 87370974 87371512 -79278784 + RLTR10 LTR ERVK 1 388 -2 4 1251 7890 41 6 2 chrX 87371524 87372478 -79277818 + RLTR10-int LTR ERVK 41 998 -989 4 1251 357 246 54 31 chrX 87372542 87372672 -79277624 + RLTR10-int LTR ERVK 1462 1594 -5987 4 1251 8822 18 0 0 chrX 87372753 87373748 -79276548 + RLTR10-int LTR ERVK 990 1984 -3 4 1251 2237 61 16 6 chrX 87373750 87374065 -79276231 + RLTR10 LTR ERVK 1 318 -72 4 1251 259 82 0 39 chrX 87374086 87374137 -79276159 + RLTR10 LTR ERVK 259 307 -83 4 1251 932 112 18 24 chrX 87374142 87374307 -79275989 + RLTR10 LTR ERVK 227 390 0 4 1251 17947 111 7 11 chrX 87374307 87378060 -79272236 - L1Md_F2 LINE L1 -1787 4096 360 4 1251 387 377 47 37 chrX 87378482 87378697 -79271599 + MER20 DNA MER1_type 1 217 -2 4 1251 495 0 0 0 chrX 87378789 87378844 -79271452 + (TA)n Simple_repeat Simple_repeat 2 56 0 4 1251 20328 140 17 1 chrX 87379545 87383810 -79266486 + L1_Mus3 LINE L1 2288 6623 -15 4 1251 1071 266 114 36 chrX 87383810 87384117 -79266179 + ORR1D2 LTR MaLR 13 352 -18 4 1251 825 284 119 24 chrX 87384117 87384453 -79265843 - ORR1D2 LTR MaLR 0 370 3 4 1251 1071 266 114 36 chrX 87384453 87384477 -79265819 + ORR1D2 LTR MaLR 353 370 0 4 1251 283 255 125 58 chrX 87384477 87384570 -79265726 + PB1 SINE Alu 24 123 -4 4 1251 24 0 0 0 chrX 87384692 87384716 -79265580 + AT_rich Low_complexity Low_complexity 1 24 0 4 1251 503 314 75 23 chrX 87384761 87384934 -79265362 + B3A SINE B2 1 182 -16 4 1251 11477 80 1 0 chrX 87385017 87387285 -79263011 - L1Md_F2 LINE L1 0 6582 4312 4 1251 34179 77 18 4 chrX 87387282 87393359 -79256937 - L1Md_F2 LINE L1 -1 6584 412 4 1251 22446 98 8 7 chrX 87393351 87397239 -79253057 - L1Md_F2 LINE L1 -1542 4341 449 4 1251 21 71 0 0 chrX 87397443 87397485 -79252811 + AT_rich Low_complexity Low_complexity 1 42 0 4 1251 21 36 0 0 chrX 87397557 87397585 -79252711 + AT_rich Low_complexity Low_complexity 1 28 0 5 1251 607 257 0 0 chrX 87398211 87398341 -79251955 + B1_Mur2 SINE Alu 3 132 -17 5 1251 1294 78 0 0 chrX 87398380 87398546 -79251750 - L1_Mm LINE L1 -2362 3521 3356 5 1251 556 148 0 16 chrX 87398549 87398673 -79251623 + (CCAA)n Simple_repeat Simple_repeat 2 123 0 5 1251 1109 197 170 48 chrX 87399262 87399875 -79250421 - RMER6C LTR ERVK -5 715 122 5 1251 387 155 0 0 chrX 87399875 87399948 -79250348 - Lx2B LINE L1 -1149 5851 5774 5 1251 209 258 48 0 chrX 87401133 87401195 -79249101 + GA-rich Low_complexity Low_complexity 3 67 0 5 1251 312 252 21 36 chrX 87401166 87401306 -79248990 + A-rich Low_complexity Low_complexity 2 139 0 5 1251 232 178 0 0 chrX 87401949 87401994 -79248302 + T-rich Low_complexity Low_complexity 1 45 0 5 1251 1065 96 0 27 chrX 87401994 87402144 -79248152 - B1_Mus1 SINE Alu 0 148 3 5 1251 405 0 0 0 chrX 87403579 87403624 -79246672 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 1251 493 265 103 0 chrX 87403663 87403848 -79246448 - MER33 DNA MER1_type -115 209 6 5 1251 272 75 25 0 chrX 87403974 87404013 -79246283 + MTC LTR MaLR 1 40 -381 5 1251 270 232 0 68 chrX 87404013 87404101 -79246195 - RLTR31_Mur LTR ERVK 0 553 472 5 1251 1978 174 72 21 chrX 87404201 87404578 -79245718 + MTC LTR MaLR 26 421 0 5 1251 193 75 24 24 chrX 87404594 87404635 -79245661 + (TTATA)n Simple_repeat Simple_repeat 5 45 0 5 1251 501 278 14 138 chrX 87405778 87405852 -79244444 + B3A SINE B2 6 66 -132 5 1251 252 0 0 0 chrX 87405852 87405880 -79244416 + (TGG)n Simple_repeat Simple_repeat 1 28 0 5 1251 221 30 61 0 chrX 87405881 87405914 -79244382 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1251 501 278 14 138 chrX 87405914 87406054 -79244242 + B3A SINE B2 67 195 -3 5 1251 817 271 15 0 chrX 87406690 87406893 -79243403 + B3 SINE B2 1 206 -10 5 1251 3600 133 65 2 chrX 87406937 87407570 -79242726 - L1_Mur1 LINE L1 -2695 3191 2519 5 1251 21 0 0 0 chrX 87407717 87407738 -79242558 + AT_rich Low_complexity Low_complexity 1 21 0 5 1251 405 58 0 0 chrX 87408331 87408383 -79241913 + (TA)n Simple_repeat Simple_repeat 1 52 0 5 1251 384 111 0 0 chrX 87408383 87408455 -79241841 + (GA)n Simple_repeat Simple_repeat 1 72 0 5 1251 188 280 178 10 chrX 87408876 87408977 -79241319 + MIR SINE MIR 74 191 -71 5 1251 2011 301 28 19 chrX 87409488 87410263 -79240033 + Lx5 LINE L1 6334 6993 -57 5 1251 243 392 37 26 chrX 87410596 87410787 -79239509 - Kanga1b DNA Tc2 -289 490 298 5 1251 604 238 191 10 chrX 87410876 87411201 -79239095 - MT2A LTR ERVL -168 325 3 5 1251 3758 205 23 62 chrX 87411762 87412667 -79237629 - RMER13B LTR ERVK 0 908 39 5 1251 500 296 97 23 chrX 87412669 87412845 -79237451 + B3A SINE B2 4 192 -6 5 1251 1576 271 49 39 chrX 87412992 87413201 -79237095 - Lx6 LINE L1 0 7460 7265 5 1251 2931 34 87 0 chrX 87413201 87413579 -79236717 + IAPLTR2a LTR ERVK 1 411 0 5 1251 1576 280 47 40 chrX 87413579 87413911 -79236385 - Lx6 LINE L1 -196 7264 6946 5 1251 34604 51 2 3 chrX 87414125 87419349 -79230947 + L1Md_T LINE L1 278 5589 -297 5 1251 8424 33 0 0 chrX 87419349 87420340 -79229956 + L1Md_T LINE L1 5590 6580 -5 5 1251 380 250 11 0 chrX 87420713 87420805 -79229491 + RMER19B LTR ERVK 19 111 -791 5 1251 708 100 0 10 chrX 87420805 87420906 -79229390 + L1Md_F2 LINE L1 5486 5585 -298 5 1251 7618 62 9 2 chrX 87420907 87421884 -79228412 + L1Md_F2 LINE L1 5587 6570 -12 5 1251 25 0 0 0 chrX 87421980 87422005 -79228291 + AT_rich Low_complexity Low_complexity 1 25 0 5 1251 1210 136 0 0 chrX 87422167 87422351 -79227945 + B2_Mm2 SINE B2 1 184 -11 5 1251 638 279 7 0 chrX 87422530 87422670 -79227626 + B1_Mur2 SINE Alu 1 141 -8 5 1251 585 182 20 0 chrX 87422700 87422848 -79227448 + (TA)n Simple_repeat Simple_repeat 2 152 0 5 1251 217 344 53 11 chrX 87422893 87422987 -79227309 - PB1D10 SINE Alu -1 116 19 5 1251 253 385 85 52 chrX 87423656 87423963 -79226333 - MT2A LTR ERVL 0 533 217 5 1251 429 315 39 0 chrX 87423987 87424114 -79226182 - MTEa LTR MaLR -235 144 13 5 156 10187 70 1 0 chrX 87424283 87425591 -79224705 - L1_Mm LINE L1 0 5883 4575 5 1252 4605 42 3 24 chrX 87425606 87426191 -79224105 + L1Md_F3 LINE L1 5995 6567 -17 5 1252 582 15 0 0 chrX 87426205 87426272 -79224024 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 5 1252 6286 81 3 3 chrX 87426325 87427179 -79223117 + L1Md_F2 LINE L1 5729 6582 0 5 1252 934 68 114 0 chrX 87427194 87427326 -79222970 + B1_Mus1 SINE Alu 2 148 0 5 1252 235 68 85 0 chrX 87427331 87427390 -79222906 + (CAAA)n Simple_repeat Simple_repeat 1 64 0 5 1252 282 267 41 10 chrX 87427562 87427686 -79222610 + L1MA6 LINE L1 5374 5496 -795 5 1252 378 289 22 0 chrX 87427687 87427777 -79222519 + B1F2 SINE Alu 31 122 -27 5 1252 675 295 25 133 chrX 87427789 87428391 -79221905 + L1MA6 LINE L1 5629 6165 -135 5 1252 506 298 8 32 chrX 87428398 87428523 -79221773 + RSINE1 SINE B4 11 132 -33 5 1252 813 210 7 0 chrX 87428666 87428804 -79221492 + B1_Mur4 SINE Alu 11 149 -1 5 1252 42 57 0 0 chrX 87428840 87428910 -79221386 + AT_rich Low_complexity Low_complexity 1 70 0 5 1252 22 0 0 0 chrX 87429014 87429036 -79221260 + AT_rich Low_complexity Low_complexity 1 22 0 5 1252 2127 244 62 67 chrX 87429195 87429989 -79220307 - Lx7 LINE L1 0 7696 6907 5 1252 2767 232 41 15 chrX 87429986 87430700 -79219596 - Lx7 LINE L1 -1227 6469 5738 5 1252 7600 172 41 11 chrX 87430714 87432579 -79217717 - Lx2 LINE L1 0 6997 5095 5 1252 21 0 0 0 chrX 87432620 87432641 -79217655 + AT_rich Low_complexity Low_complexity 1 21 0 5 1252 297 68 0 0 chrX 87433907 87433951 -79216345 + (A)n Simple_repeat Simple_repeat 1 44 0 5 1252 17348 207 66 53 chrX 87433961 87435010 -79215286 + L1Md_F LINE L1 218 1267 -5371 5 1252 1331 100 16 0 chrX 87435010 87435200 -79215096 + B2_Mm2 SINE B2 3 195 0 5 1252 17348 133 15 27 chrX 87435200 87438250 -79212046 + L1Md_F LINE L1 1268 4285 -1598 5 1252 334 105 0 50 chrX 87438243 87438303 -79211993 + L1_Mus2 LINE L1 5941 5997 -569 5 1252 3412 35 2 0 chrX 87438264 87438784 -79211512 - L1Md_A LINE L1 -579 6003 5483 5 1252 25 0 0 0 chrX 87438881 87438906 -79211390 + AT_rich Low_complexity Low_complexity 1 25 0 5 1252 686 218 13 39 chrX 87438947 87439100 -79211196 + B1_Mur1 SINE Alu 1 149 0 5 1252 630 144 48 0 chrX 87439264 87439368 -79210928 - ORR1C1 LTR MaLR 0 378 270 5 1252 41 0 0 0 chrX 87439795 87439836 -79210460 + AT_rich Low_complexity Low_complexity 1 41 0 5 1252 290 274 260 0 chrX 87440781 87440985 -79209311 + L1MDa LINE L1 1551 1807 -4826 5 1252 324 0 0 0 chrX 87442212 87442248 -79208048 + (A)n Simple_repeat Simple_repeat 1 36 0 5 1252 678 297 88 15 chrX 87442390 87442650 -79207646 + Lx7 LINE L1 7085 7363 -333 5 1252 230 226 53 53 chrX 87442655 87442786 -79207510 + (TTTG)n Simple_repeat Simple_repeat 2 132 0 5 1252 241 256 88 32 chrX 87442790 87442915 -79207381 + Lx7 LINE L1 7565 7696 0 5 1252 715 182 13 69 chrX 87443197 87443356 -79206940 + RLTR23 LTR ERV1 228 377 -53 5 1252 1005 122 0 0 chrX 87443358 87443514 -79206782 + (GGAGAA)n Simple_repeat Simple_repeat 3 158 0 5 1252 775 155 23 6 chrX 87443515 87443690 -79206606 + GA-rich Low_complexity Low_complexity 1 178 0 5 1252 549 0 0 0 chrX 87443788 87443849 -79206447 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 1252 20108 168 38 69 chrX 87446516 87449501 -79200795 + Lx LINE L1 423 3486 -2400 5 1252 238 26 0 49 chrX 87449501 87449542 -79200754 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1252 20108 179 23 85 chrX 87449542 87450973 -79199323 + Lx LINE L1 3487 4601 -1285 5 1252 5455 133 10 9 chrX 87450973 87451856 -79198440 + Lx3_Mus LINE L1 6126 7009 0 5 1252 20108 179 23 85 chrX 87451856 87453067 -79197229 + Lx LINE L1 4602 5810 -76 5 1252 1113 75 0 0 chrX 87453067 87453214 -79197082 - B1_Mus2 SINE Alu 0 147 1 5 1252 20108 129 22 33 chrX 87453214 87453633 -79196663 + Lx LINE L1 5809 6231 -423 5 1252 2021 186 82 84 chrX 87453633 87454167 -79196129 - RMER16 LTR ERVK 0 533 1 5 1252 6612 129 22 33 chrX 87454167 87454584 -79195712 + Lx LINE L1 6232 6651 -3 5 1252 1762 228 88 4 chrX 87454593 87455081 -79195215 - MYSERV6-int LTR ERVK -223 8736 8208 5 1252 387 121 0 0 chrX 87455146 87455204 -79195092 - L1_Mur2 LINE L1 -1026 4851 4794 5 1252 2368 118 52 0 chrX 87455209 87455591 -79194705 + L1_Mus3 LINE L1 6237 6638 0 5 1252 2336 159 28 2 chrX 87455589 87455986 -79194310 + Lx4A LINE L1 6652 7058 0 5 1252 21 0 0 0 chrX 87455990 87456011 -79194285 + AT_rich Low_complexity Low_complexity 1 21 0 5 1252 402 221 81 0 chrX 87456026 87456112 -79194184 + B3A SINE B2 45 137 -61 5 1252 8366 62 0 5 chrX 87456560 87458317 -79191979 - L1Md_F2 LINE L1 -12 6570 4826 5 1252 1014 288 77 64 chrX 87458894 87459299 -79190997 + MTD LTR MaLR 7 416 -3 5 1252 207 114 0 0 chrX 87459857 87459892 -79190404 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 1252 2669 52 0 82 chrX 87460016 87460393 -79189903 + ORR1A1 LTR MaLR 1 346 0 5 1252 22 35 0 0 chrX 87460577 87460606 -79189690 + AT_rich Low_complexity Low_complexity 1 29 0 5 1252 198 103 0 0 chrX 87460613 87460642 -79189654 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 1252 308 364 7 92 chrX 87460648 87460790 -79189506 - RSINE1 SINE B4 -2 163 34 5 1252 21 0 0 0 chrX 87460812 87460833 -79189463 + AT_rich Low_complexity Low_complexity 1 21 0 5 1252 4858 59 27 0 chrX 87461398 87462022 -79188274 - L1_Mus1 LINE L1 -5 6562 5922 5 1252 2173 163 39 87 chrX 87462194 87463001 -79187295 - Lx5 LINE L1 -608 5278 4583 5 1252 1367 137 18 0 chrX 87462997 87463223 -79187073 + Lx5 LINE L1 5268 5497 -380 5 1252 1341 215 27 210 chrX 87463223 87463847 -79186449 + RMER19C LTR ERVK 1 510 -101 5 1252 704 110 324 0 chrX 87463849 87463994 -79186302 - Lx2 LINE L1 -1 6996 6805 5 1252 548 174 86 9 chrX 87463996 87464112 -79186184 + RMER19C LTR ERVK 778 902 0 5 1252 5170 211 101 19 chrX 87464113 87465518 -79184778 + Lx5 LINE L1 5493 7043 -7 5 1252 343 206 9 2 chrX 87465560 87465655 -79184641 - Lx3A LINE L1 0 7009 6896 5 1252 2986 65 5 10 chrX 87465658 87466064 -79184232 - L1_Mus2 LINE L1 0 6566 6163 5 1252 1096 63 7 0 chrX 87466206 87466348 -79183948 + B1_Mus1 SINE Alu 3 145 -3 5 1252 567 0 0 0 chrX 87466349 87466412 -79183884 + (TAAA)n Simple_repeat Simple_repeat 3 65 0 5 1252 652 211 19 44 chrX 87466583 87466742 -79183554 - Lx4B LINE L1 -283 6775 6621 6 1252 360 183 71 24 chrX 87466881 87466957 -79183339 + B1_Mur1 SINE Alu 60 140 -9 6 1252 275 0 0 28 chrX 87466957 87466993 -79183303 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1252 895 260 0 33 chrX 87467058 87467273 -79183023 - B3 SINE B2 -8 208 1 6 1252 543 31 0 0 chrX 87467378 87467443 -79182853 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 1252 540 309 12 36 chrX 87467444 87467612 -79182684 - B3A SINE B2 -34 164 1 6 1252 533 103 0 0 chrX 87467886 87467973 -79182323 - Lx LINE L1 0 6654 6568 6 1252 225 358 24 36 chrX 87468532 87468700 -79181596 - MLT1L LTR MaLR -2 608 443 6 1252 1818 171 58 18 chrX 87468819 87469147 -79181149 - MTC LTR MaLR 0 421 81 6 1252 1337 50 9 5 chrX 87469148 87469370 -79180926 + (TTTC)n Simple_repeat Simple_repeat 1 222 0 6 1252 259 136 29 29 chrX 87469374 87469442 -79180854 + CT-rich Low_complexity Low_complexity 4 71 0 6 1252 180 125 0 0 chrX 87469451 87469483 -79180813 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 6 1252 273 200 32 48 chrX 87469551 87469614 -79180682 - MTC LTR MaLR -348 73 12 6 1252 59 27 0 0 chrX 87470621 87470694 -79179602 + AT_rich Low_complexity Low_complexity 1 73 0 6 1252 237 180 0 0 chrX 87470734 87470784 -79179512 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1252 267 31 0 0 chrX 87470784 87470816 -79179480 + (GA)n Simple_repeat Simple_repeat 1 32 0 6 1252 592 243 7 33 chrX 87471772 87471925 -79178371 + B1_Mur2 SINE Alu 1 149 0 6 1252 456 19 0 0 chrX 87471944 87471997 -79178299 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 6 1252 1271 67 6 0 chrX 87471998 87472177 -79178119 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 6 1252 474 308 8 0 chrX 87472872 87472989 -79177307 + B1_Mur1 SINE Alu 1 118 -31 6 1252 1867 219 229 13 chrX 87472995 87473598 -79176698 - RMER19A LTR ERVK 0 737 5 6 1252 264 91 0 0 chrX 87473968 87474012 -79176284 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 6 1252 1517 38 0 0 chrX 87474027 87474210 -79176086 - L1Md_F3 LINE L1 -783 5801 5619 6 1252 1141 20 14 0 chrX 87474210 87474358 -79175938 + L1Md_F2 LINE L1 6433 6582 0 6 1252 22 0 0 0 chrX 87474759 87474781 -79175515 + AT_rich Low_complexity Low_complexity 1 22 0 6 1252 614 280 69 11 chrX 87474798 87474986 -79175310 - B3 SINE B2 -17 199 1 6 1252 315 340 10 0 chrX 87475503 87475606 -79174690 - PB1D10 SINE Alu -13 104 1 6 1252 1139 55 14 0 chrX 87476345 87476490 -79173806 + B1_Mus1 SINE Alu 1 147 -1 6 1252 246 81 0 0 chrX 87476491 87476528 -79173768 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 6 1252 204 40 0 0 chrX 87476655 87476680 -79173616 + (TA)n Simple_repeat Simple_repeat 2 26 0 6 1252 6493 122 33 3 chrX 87479586 87480623 -79169673 - Lx3_Mus LINE L1 -11 6998 5931 6 1252 1826 210 79 36 chrX 87482836 87483370 -79166926 - RLTR31B_Mm LTR ERVK 0 557 1 6 1252 5813 198 69 45 chrX 87483372 87484994 -79165302 - RMER3D-int LTR ERVK -2 2840 1180 6 1252 5794 181 47 61 chrX 87485010 87486406 -79163890 + RMER16-int LTR ERVK 2488 3864 -1542 6 1252 6190 160 11 22 chrX 87486378 87487490 -79162806 + ETnERV2-int LTR ERVK 5339 6437 -969 6 1252 304 159 68 68 chrX 87487686 87487760 -79162536 + ETnERV2-int LTR ERVK 7331 7404 -2 6 1252 2605 137 9 44 chrX 87487761 87488196 -79162100 + RLTR9B2 LTR ERVK 1 420 0 6 1252 1050 203 31 38 chrX 87488207 87488468 -79161828 - L1_Mur3 LINE L1 -1563 4317 4059 6 1252 2329 169 27 31 chrX 87488468 87488919 -79161377 - RMER6B LTR ERVK -12 449 1 6 1252 2945 213 28 14 chrX 87488919 87490003 -79160293 - MYSERV6-int LTR ERVK -7 8952 7813 6 1252 4030 113 17 2 chrX 87490051 87490937 -79159359 - L1_Mus4 LINE L1 -576 6060 5164 6 1252 3840 100 29 4 chrX 87490942 87491503 -79158793 + L1_Mus4 LINE L1 6054 6628 -8 6 1252 2477 152 58 11 chrX 87491514 87491966 -79158330 - MYSERV6-int LTR ERVK -1146 7813 7341 6 1252 1241 180 78 81 chrX 87491965 87492277 -79158019 - MYSERV6-int LTR ERVK -2179 6780 6473 6 1252 429 20 0 0 chrX 87492277 87492327 -79157969 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 1252 1241 180 78 81 chrX 87492327 87492359 -79157937 - MYSERV6-int LTR ERVK -2487 6472 6437 6 1252 230 300 45 104 chrX 87492359 87492493 -79157803 - B4A SINE B4 -64 228 103 6 1252 318 222 0 79 chrX 87492433 87492509 -79157787 - B1_Mus1 SINE Alu -49 71 3 6 1252 384 205 12 12 chrX 87492521 87492605 -79157691 - MYSERV6-int LTR ERVK -3857 5102 5019 6 1252 253 224 172 0 chrX 87492659 87492717 -79157579 - B1_Mur4 SINE Alu -78 72 5 6 1252 2818 125 72 88 chrX 87492720 87493345 -79156951 - MYSERV6-int LTR ERVK -3964 4995 4381 6 1252 4725 152 41 39 chrX 87493324 87494300 -79155996 - MYSERV6-int LTR ERVK -6876 2083 1106 6 1252 2452 109 14 52 chrX 87494301 87494728 -79155568 - IAPLTR2a LTR ERVK 0 411 1 6 1252 26340 13 3 2 chrX 87494728 87497681 -79152615 - IAPEz-int LTR ERVK 0 6481 3525 6 1252 932 73 24 0 chrX 87497681 87497804 -79152492 - IAPEz-int LTR ERVK -2770 4910 4785 6 1252 1786 127 4 4 chrX 87497801 87498063 -79152233 - IAPEz-int LTR ERVK -5183 2497 2236 6 1252 442 66 0 32 chrX 87498052 87498115 -79152181 - IAPEz-int LTR ERVK -5062 1419 1359 6 1252 3431 61 7 12 chrX 87498115 87498822 -79151474 - IAPEz-int LTR ERVK -5819 662 35 6 1252 2452 109 14 52 chrX 87498832 87499259 -79151037 - IAPLTR2a LTR ERVK 0 411 1 6 1252 298 77 0 0 chrX 87499262 87499301 -79150995 - MYSERV6-int LTR ERVK -7851 1108 1070 6 1252 290 62 0 40 chrX 87499301 87499335 -79150961 + (CAAAAA)n Simple_repeat Simple_repeat 6 38 0 6 1252 1140 82 0 0 chrX 87499335 87499481 -79150815 + B1_Mus2 SINE Alu 2 147 0 6 1252 290 62 0 40 chrX 87499481 87499496 -79150800 + (CAAAAA)n Simple_repeat Simple_repeat 3 17 0 6 1252 637 106 418 0 chrX 87499496 87499694 -79150602 - MYSERV6-int LTR ERVK -7875 1084 804 6 1252 390 240 36 136 chrX 87499707 87499847 -79150449 + RMER13A LTR ERVK 14 139 -721 6 1252 344 228 30 94 chrX 87499823 87499932 -79150364 + RMER13A LTR ERVK 393 516 -392 6 1252 386 284 84 25 chrX 87500105 87500224 -79150072 + RMER13A LTR ERVK 735 860 0 1 1252 1380 150 22 0 chrX 87500227 87500453 -79149843 - MYSERV6-int LTR ERVK -8159 800 570 2 1252 1570 237 105 3 chrX 87500561 87500941 -79149355 + MTC LTR MaLR 3 421 0 3 1252 231 235 0 0 chrX 87501067 87501118 -79149178 + MLT1D LTR MaLR 68 118 -387 4 1252 602 245 20 20 chrX 87501126 87501272 -79149024 - B1_Mus2 SINE Alu 0 147 2 5 1252 271 260 65 28 chrX 87501272 87501379 -79148917 + MLT1D LTR MaLR 105 215 -290 4 1252 3002 41 0 13 chrX 87501597 87501970 -79148326 - L1Md_F2 LINE L1 -4 6578 6211 6 1252 388 0 0 0 chrX 87501970 87502013 -79148283 + L1Md_F3 LINE L1 5874 5916 -668 7 1252 770 290 40 10 chrX 87502633 87502835 -79147461 + MTE2b LTR MaLR 110 317 -62 8 1252 3457 303 76 18 chrX 87502870 87503936 -79146360 + MTE-int LTR MaLR 1 1138 -442 9 1252 1740 220 36 26 chrX 87503936 87504324 -79145972 - ORR1B1 LTR MaLR 0 394 3 1 1252 3457 303 76 18 chrX 87504324 87504357 -79145939 + MTE-int LTR MaLR 1139 1163 -417 9 1252 2139 342 60 53 chrX 87504358 87505121 -79145175 - MTE-int LTR MaLR -185 1395 631 1 1252 769 75 30 0 chrX 87505121 87505254 -79145042 + (TCTCTG)n Simple_repeat Simple_repeat 2 138 0 1 1252 1136 76 7 0 chrX 87505259 87505404 -79144892 - B1_Mus1 SINE Alu -2 146 1 1 1252 2139 342 60 53 chrX 87505404 87505443 -79144853 - MTE-int LTR MaLR -955 625 576 1 1252 222 62 0 0 chrX 87505443 87505475 -79144821 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1 1252 2139 342 60 53 chrX 87505475 87505768 -79144528 - MTE-int LTR MaLR -1005 575 285 1 1252 4147 46 76 8 chrX 87506024 87506548 -79143748 - LTRIS2 LTR ERV1 0 564 5 1 1252 556 239 74 68 chrX 87507261 87507409 -79142887 - B1_Mur1 SINE Alu 0 149 1 1 1252 495 0 0 0 chrX 87507811 87507866 -79142430 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 1 1252 29 78 0 0 chrX 87508236 87508300 -79141996 + AT_rich Low_complexity Low_complexity 1 64 0 1 1252 434 155 45 45 chrX 87509098 87509186 -79141110 + ORR1B1 LTR MaLR 1 88 -306 1 1252 322 112 0 0 chrX 87509180 87509232 -79141064 + ORR1B1 LTR MaLR 316 419 0 1 1252 14826 128 11 7 chrX 87509579 87512482 -79137814 - L1_Mus3 LINE L1 -341 6297 3383 2 1252 9829 194 43 7 chrX 87512539 87513761 -79136535 + L1_Mur1 LINE L1 1532 2793 -3093 2 1252 255 31 0 0 chrX 87513761 87513793 -79136503 + (CAA)n Simple_repeat Simple_repeat 1 32 0 2 1252 9829 194 43 7 chrX 87513793 87514811 -79135485 + L1_Mur1 LINE L1 2794 3853 -2033 2 1252 1758 178 3 12 chrX 87514812 87515131 -79135165 + ORR1A4 LTR MaLR 14 329 0 2 1252 29 0 0 0 chrX 87515761 87515790 -79134506 + AT_rich Low_complexity Low_complexity 1 29 0 2 1252 387 0 0 0 chrX 87516186 87516229 -79134067 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 1252 3695 44 0 4 chrX 87516360 87516817 -79133479 + L1Md_F3 LINE L1 6130 6584 0 2 1252 1477 198 24 84 chrX 87516843 87517213 -79133083 + RLTR1B LTR ERV1 165 512 0 2 1252 773 172 0 6 chrX 87517227 87517408 -79132888 + (TA)n Simple_repeat Simple_repeat 1 180 0 2 1252 25 51 0 0 chrX 87517486 87517525 -79132771 + AT_rich Low_complexity Low_complexity 1 39 0 2 1252 22 35 0 0 chrX 87518221 87518250 -79132046 + AT_rich Low_complexity Low_complexity 1 29 0 3 1252 1150 306 114 40 chrX 87518477 87519691 -79130605 + L1MCb LINE L1 308 1700 -5051 3 1252 445 297 97 12 chrX 87519707 87520068 -79130228 + L1M2 LINE L1 5134 5529 -768 3 1252 375 23 0 0 chrX 87520082 87520126 -79130170 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 3 1252 1079 73 0 0 chrX 87520126 87520262 -79130034 - B1_Mm SINE Alu -9 138 3 3 1252 7475 106 11 41 chrX 87520268 87521492 -79128804 - Lx3_Mus LINE L1 -12 6997 5810 3 1252 6137 87 133 25 chrX 87521494 87521744 -79128552 + L1_Mur1 LINE L1 3656 3905 -1981 3 1252 2107 128 68 50 chrX 87521744 87522140 -79128156 - RLTR9D LTR ERVK 0 403 1 3 1252 6137 87 133 25 chrX 87522140 87522922 -79127374 + L1_Mur1 LINE L1 3906 4799 -1087 3 1252 1177 214 202 17 chrX 87523037 87523389 -79126907 - RMER5 LTR ERV1 -3 531 115 3 1252 6594 195 31 13 chrX 87523412 87524965 -79125331 + Lx5 LINE L1 5459 7050 0 3 1252 369 296 97 19 chrX 87525066 87525221 -79125075 + L1MCb LINE L1 3575 3741 -2823 3 1252 25 65 0 0 chrX 87525241 87525287 -79125009 + AT_rich Low_complexity Low_complexity 1 46 0 4 1252 281 258 30 0 chrX 87525319 87525385 -79124911 - B3 SINE B2 -129 87 20 4 1252 266 178 0 0 chrX 87525381 87525426 -79124870 - ID2 SINE ID -37 46 2 4 1252 458 303 73 52 chrX 87525501 87525828 -79124468 + L1MC3 LINE L1 6279 6612 -1173 4 1252 410 250 44 0 chrX 87525815 87525951 -79124345 + L1MC3 LINE L1 7620 7761 -24 4 1252 380 325 75 0 chrX 87526143 87526263 -79124033 - ID_B1 SINE B4 0 224 96 4 1252 305 112 85 39 chrX 87526314 87526444 -79123852 + (TA)n Simple_repeat Simple_repeat 2 137 0 4 1252 327 373 40 0 chrX 87526451 87526577 -79123719 - B1F2 SINE Alu -15 134 4 4 1252 368 274 0 0 chrX 87526591 87526664 -79123632 + B4A SINE B4 202 274 -18 4 1252 833 212 52 38 chrX 87527340 87527629 -79122667 - L1_Rod LINE L1 -4021 1826 1534 4 1252 443 297 57 38 chrX 87527833 87528043 -79122253 + RLTR14 LTR ERV1 156 369 -13 4 1252 454 320 37 37 chrX 87528057 87528352 -79121944 - L1_Rod LINE L1 -4312 1535 1241 4 1252 897 208 82 9 chrX 87529584 87529817 -79120479 + Lx7 LINE L1 7447 7696 0 5 1252 802 265 25 0 chrX 87529865 87530069 -79120227 + B3 SINE B2 1 209 -7 5 1252 198 0 0 0 chrX 87530252 87530274 -79120022 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1252 32 43 0 0 chrX 87530718 87530764 -79119532 + AT_rich Low_complexity Low_complexity 1 46 0 5 1252 22 35 0 0 chrX 87530888 87530917 -79119379 + AT_rich Low_complexity Low_complexity 1 29 0 5 1252 272 262 12 12 chrX 87531069 87531154 -79119142 + (TATATG)n Simple_repeat Simple_repeat 6 90 0 5 1252 741 240 100 5 chrX 87531155 87531408 -79118888 - L1MA4 LINE L1 -335 5965 5685 5 1252 1638 273 144 23 chrX 87531424 87532076 -79118220 - Lx7 LINE L1 -20 7676 6946 5 1252 30189 108 14 8 chrX 87532247 87537806 -79112490 - Lx3_Mus LINE L1 0 7009 1420 5 1252 257 0 30 0 chrX 87537806 87537839 -79112457 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 5 1252 30189 138 160 14 chrX 87537839 87538488 -79111808 - Lx3_Mus LINE L1 -4467 1419 676 5 1252 366 23 0 0 chrX 87538793 87538836 -79111460 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1252 20235 91 16 36 chrX 87538954 87542858 -79107438 - L1Md_F2 LINE L1 -1 6581 2779 6 1252 2637 117 32 89 chrX 87542869 87543375 -79106921 - RLTR44C LTR ERVK -25 477 1 6 1252 4555 69 0 0 chrX 87543375 87543941 -79106355 - RLTR44-int LTR ERVK 0 2812 2247 6 1252 555 291 26 56 chrX 87543955 87544224 -79106072 - IAPEz-int LTR ERVK -2798 3683 3423 6 1252 2104 157 22 152 chrX 87544303 87544897 -79105399 - RLTR44-int LTR ERVK -1480 1332 816 6 1252 683 139 8 37 chrX 87544906 87545040 -79105256 - RLTR44-int LTR ERVK -2563 249 120 6 1252 1129 156 53 13 chrX 87545041 87545269 -79105027 - RLTR44-int LTR ERVK -2549 263 27 6 1252 2512 134 28 86 chrX 87545299 87545797 -79104499 - RLTR44C LTR ERVK -31 471 3 6 1252 10283 112 14 10 chrX 87545817 87548342 -79101954 - L1Md_F LINE L1 -3164 2719 184 6 1252 1475 193 36 14 chrX 87548423 87548701 -79101595 - RLTR31B_Mm LTR ERVK 0 557 274 6 1252 799 93 0 0 chrX 87548712 87548820 -79101476 - B1_Mm SINE Alu -13 134 27 6 1252 4032 196 36 30 chrX 87548822 87549765 -79100531 - RLTR13A2 LTR ERVK 0 958 10 6 1252 1537 104 24 12 chrX 87549778 87550032 -79100264 - RLTR31B_Mm LTR ERVK -300 257 1 6 1252 1620 149 0 11 chrX 87550125 87550410 -79099886 - Lx LINE L1 0 6654 6373 6 1252 468 0 0 0 chrX 87550415 87550467 -79099829 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 1252 22 35 0 0 chrX 87550477 87550506 -79099790 + AT_rich Low_complexity Low_complexity 1 29 0 7 1252 372 119 0 0 chrX 87551580 87551639 -79098657 + (TG)n Simple_repeat Simple_repeat 1 59 0 7 1252 23 68 0 0 chrX 87552336 87552380 -79097916 + AT_rich Low_complexity Low_complexity 1 44 0 7 1252 28561 41 35 15 chrX 87553070 87554719 -79095577 - L1Md_A LINE L1 0 6582 4881 7 1252 242 167 46 77 chrX 87554719 87554784 -79095512 + RMER20A LTR ERVK 186 248 -268 7 156 28561 41 35 15 chrX 87554784 87559228 -79091068 - L1Md_A LINE L1 0 4880 290 7 1253 5654 125 14 7 chrX 87559279 87561007 -79089289 + L1Md_F LINE L1 357 2097 -3786 7 1253 414 0 0 0 chrX 87561618 87561664 -79088632 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1253 264 59 0 0 chrX 87561765 87561799 -79088497 + (TTA)n Simple_repeat Simple_repeat 1 34 0 7 1253 7233 152 27 4 chrX 87561811 87563272 -79087024 - Lx3B LINE L1 -9 6964 5463 7 1253 203 0 0 36 chrX 87563293 87563321 -79086975 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 8 1253 309 26 0 0 chrX 87563321 87563359 -79086937 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 8 1253 19600 144 21 78 chrX 87563941 87564232 -79086064 - Lx3B LINE L1 -418 5468 5197 7 1253 240 59 0 0 chrX 87564232 87564266 -79086030 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 8 1253 19600 144 21 78 chrX 87564266 87564476 -79085820 - Lx3B LINE L1 -690 5196 5021 7 1253 4402 88 68 0 chrX 87564476 87565120 -79085176 - L1_Mus3 LINE L1 -6 6632 5945 8 1253 19600 144 21 78 chrX 87565120 87565133 -79085163 - L1_Mur1 LINE L1 -866 5020 5020 8 1253 1144 93 0 17 chrX 87565133 87565308 -79084988 - L1_Mus1 LINE L1 0 6567 6396 8 1253 19600 144 21 78 chrX 87565308 87565866 -79084430 - Lx3B LINE L1 -866 5020 4654 7 1253 2824 129 2 9 chrX 87565866 87566304 -79083992 + Lx3_Mus LINE L1 6575 7009 0 8 1253 19600 144 21 78 chrX 87566304 87568671 -79081625 - Lx3B LINE L1 -1233 4653 2301 7 1253 1037 112 0 7 chrX 87568671 87568815 -79081481 + B1_Mus2 SINE Alu 2 144 -3 8 1253 981 119 0 0 chrX 87568815 87568966 -79081330 + (GAA)n Simple_repeat Simple_repeat 2 152 0 8 1253 19600 153 26 56 chrX 87568966 87570484 -79079812 - Lx3B LINE L1 -3586 2300 742 7 1253 378 160 0 13 chrX 87570597 87570673 -79079623 - Lx3B LINE L1 -6231 753 679 7 1253 636 251 0 0 chrX 87570736 87570907 -79079389 + CT-rich Low_complexity Low_complexity 2 172 0 8 1253 3304 168 33 0 chrX 87570924 87571502 -79078794 - Lx2B LINE L1 0 7000 6404 9 1253 6466 139 11 19 chrX 87571510 87571639 -79078657 - Lx2A1 LINE L1 -12 6996 6873 9 1253 3353 33 5 2 chrX 87571639 87572034 -79078262 + MTA_Mm LTR MaLR 1 396 0 9 1253 6466 139 11 19 chrX 87572034 87572986 -79077310 - Lx2A1 LINE L1 -136 6872 5924 9 1253 1411 162 24 0 chrX 87572994 87573247 -79077049 - L1_Mm LINE L1 -96 5787 5529 9 1253 415 313 43 0 chrX 87573514 87573629 -79076667 - B3 SINE B2 -22 194 75 9 1253 349 260 12 0 chrX 87573665 87573758 -79076538 - B3 SINE B2 -104 94 1 9 1253 1184 61 0 0 chrX 87574627 87574774 -79075522 + B1_Mm SINE Alu 1 147 0 9 1253 222 159 43 0 chrX 87575070 87575139 -79075157 + (TA)n Simple_repeat Simple_repeat 2 73 0 9 1253 33724 36 0 0 chrX 87575295 87580956 -79069340 + L1Md_T LINE L1 1 5589 -297 9 1253 9056 4 0 0 chrX 87580956 87581952 -79068344 + L1Md_T LINE L1 5590 6585 0 9 1253 302 241 27 30 chrX 87582122 87582226 -79068070 - MLT2B4 LTR ERVL -439 115 8 9 1253 2375 213 86 4 chrX 87582412 87582935 -79067361 - Lx5 LINE L1 -3 7047 6482 9 1253 485 361 134 30 chrX 87582957 87583493 -79066803 + L2 LINE L2 2168 2759 -660 1 1253 22 0 0 0 chrX 87583518 87583540 -79066756 + AT_rich Low_complexity Low_complexity 1 22 0 1 1253 631 266 13 25 chrX 87583664 87583822 -79066474 - RSINE1 SINE B4 -6 159 4 1 1253 388 318 63 0 chrX 87584274 87584400 -79065896 - MER3 DNA MER1_type -1 208 75 1 1253 341 139 56 0 chrX 87584894 87584966 -79065330 - Lx5 LINE L1 -8 7042 6967 1 1253 1391 198 48 8 chrX 87585577 87585903 -79064393 - Lx7 LINE L1 -525 7171 6816 1 1253 775 290 56 73 chrX 87585868 87586388 -79063908 + Lx7 LINE L1 7176 7686 -10 1 1253 4748 214 67 47 chrX 87586424 87587938 -79062358 - Lx2B LINE L1 -10 6990 5450 1 1253 5658 45 0 1 chrX 87588641 87589329 -79060967 - L1Md_F3 LINE L1 0 6584 5898 1 1253 23 33 0 0 chrX 87589444 87589474 -79060822 + AT_rich Low_complexity Low_complexity 1 30 0 1 1253 262 354 26 26 chrX 87590402 87590518 -79059778 + LTR78 LTR ERV1 768 883 -421 1 1253 602 216 58 7 chrX 87590708 87590862 -79059434 + ORR1A3-int LTR MaLR 434 595 -1368 1 1253 468 223 74 37 chrX 87590767 87590930 -79059366 + RLTR25A LTR ERVK 446 614 -489 1 1253 10508 205 49 25 chrX 87590985 87595199 -79055097 - Lx2B LINE L1 -1338 4548 229 1 1253 3298 196 21 69 chrX 87595206 87595306 -79054990 - L1_Mur2 LINE L1 -3720 2157 2052 1 1253 432 0 0 0 chrX 87595306 87595354 -79054942 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1253 3298 196 21 69 chrX 87595354 87596003 -79054293 - L1_Mur2 LINE L1 -3826 2051 1420 1 1253 1209 74 0 0 chrX 87596003 87596151 -79054145 - B1_Mus1 SINE Alu 0 148 1 1 1253 3298 190 32 73 chrX 87596151 87596613 -79053683 - L1_Mur2 LINE L1 -4458 1419 980 1 1253 1604 177 9 68 chrX 87596980 87597282 -79053014 - ORR1B1 LTR MaLR -34 360 76 1 1253 3940 78 0 45 chrX 87597282 87597834 -79052462 - L1_Mus2 LINE L1 0 6566 6040 1 1253 1604 95 0 45 chrX 87597834 87597878 -79052418 - ORR1B1 LTR MaLR -319 75 1 1 1253 23 0 0 0 chrX 87597902 87597925 -79052371 + AT_rich Low_complexity Low_complexity 1 23 0 1 1253 270 148 0 0 chrX 87597966 87598020 -79052276 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 1253 651 289 13 7 chrX 87598041 87598191 -79052105 - B3A SINE B2 -47 151 1 1 1253 29 28 0 0 chrX 87598454 87598490 -79051806 + AT_rich Low_complexity Low_complexity 1 36 0 1 1253 4677 145 70 16 chrX 87598503 87599344 -79050952 - Lx3B LINE L1 -3 6970 6084 1 1253 6950 37 28 1 chrX 87599370 87600203 -79050093 - RLTR13A LTR ERVK 0 855 1 1 1253 520 210 10 0 chrX 87600275 87600375 -79049921 - RMER15 LTR ERVL -31 544 444 1 1253 270 0 0 0 chrX 87600375 87600405 -79049891 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 1253 863 282 41 29 chrX 87600405 87600745 -79049551 + Lx6 LINE L1 7090 7433 -27 1 1253 763 20 20 10 chrX 87600822 87600923 -79049373 + (TTTC)n Simple_repeat Simple_repeat 2 103 0 1 1253 216 0 0 0 chrX 87600926 87600950 -79049346 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1253 1032 75 0 7 chrX 87600951 87601086 -79049210 - B1_Mm SINE Alu -12 135 2 1 1253 2074 98 24 18 chrX 87601188 87601503 -79048793 + Lx2 LINE L1 6651 6969 -28 1 1253 225 0 0 0 chrX 87601503 87601528 -79048768 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 1 1253 2074 98 24 18 chrX 87601528 87601545 -79048751 + Lx2 LINE L1 6970 6985 -12 1 1253 342 0 0 0 chrX 87601789 87601827 -79048469 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 1253 491 365 34 23 chrX 87602500 87602766 -79047530 - MLT1E LTR MaLR 0 653 385 1 1253 388 353 64 12 chrX 87602955 87603127 -79047169 - MLT1E LTR MaLR -399 225 45 1 1253 833 254 20 52 chrX 87603133 87603382 -79046914 - RLTR40 LTR ERVK -7 810 570 1 1253 993 169 51 91 chrX 87603357 87603611 -79046685 - RLTR40 LTR ERVK -186 631 388 1 1253 571 291 64 103 chrX 87603735 87604141 -79046155 + RMER10A LTR ERVL 29 418 -24 1 1253 1750 192 50 32 chrX 87604136 87604540 -79045756 - RLTR40 LTR ERVK -406 411 1 1 1253 1478 201 24 47 chrX 87604557 87604938 -79045358 - RMER6C LTR ERVK 0 690 319 1 1253 280 311 0 138 chrX 87604915 87605053 -79045243 - B1_Mm SINE Alu -26 121 3 1 1253 303 234 0 15 chrX 87605001 87605066 -79045230 - MT2B2 LTR ERVL -367 217 154 1 1253 483 171 0 0 chrX 87605072 87605148 -79045148 - MT2B LTR ERVL -345 256 181 1 1253 225 119 48 0 chrX 87605152 87605194 -79045102 - RMER6D LTR ERVK -674 46 3 1 1253 288 337 56 0 chrX 87605610 87605699 -79044597 + PB1D7 SINE Alu 18 111 -9 1 1253 411 38 0 0 chrX 87605956 87606009 -79044287 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1253 25 0 0 0 chrX 87606220 87606245 -79044051 + AT_rich Low_complexity Low_complexity 1 25 0 1 1253 2242 114 37 6 chrX 87606868 87607222 -79043074 - Lx LINE L1 -3 6651 6287 1 1253 1069 99 0 0 chrX 87607707 87607848 -79042448 + B1_Mus1 SINE Alu 2 142 -6 1 1253 24324 107 6 3 chrX 87607891 87614030 -79036266 + L1_Mus1 LINE L1 409 6564 -3 1 1253 446 299 29 7 chrX 87614102 87614240 -79036056 - B1_Mur1 SINE Alu -6 143 3 1 1253 285 98 0 0 chrX 87614255 87614296 -79036000 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1 1253 468 255 20 0 chrX 87614305 87614403 -79035893 - B1_Mus1 SINE Alu -9 139 40 1 1253 1082 79 0 0 chrX 87614472 87614612 -79035684 + B1_Mus2 SINE Alu 1 140 -7 1 1253 26 0 0 0 chrX 87614615 87614641 -79035655 + AT_rich Low_complexity Low_complexity 1 26 0 1 1253 609 284 112 34 chrX 87615356 87615549 -79034747 - B3A SINE B2 -5 211 1 1 1253 203 102 19 58 chrX 87615753 87615805 -79034491 + T-rich Low_complexity Low_complexity 1 50 0 1 1253 562 288 90 11 chrX 87615925 87616202 -79034094 + L1MA7 LINE L1 5756 6054 -237 1 1253 46 33 0 0 chrX 87616218 87616278 -79034018 + AT_rich Low_complexity Low_complexity 1 60 0 1 1253 2284 210 78 35 chrX 87616289 87616826 -79033470 - RLTR20B2 LTR ERVK 0 560 1 1 1253 536 200 91 0 chrX 87617453 87617563 -79032733 + RMER2 LTR ERV1 1 120 -447 1 1253 919 139 34 23 chrX 87617577 87617754 -79032542 - RMER6B LTR ERVK -175 286 108 1 1253 1232 234 50 53 chrX 87617749 87618070 -79032226 + RMER2 LTR ERV1 248 567 0 1 1253 2546 153 24 11 chrX 87618281 87618736 -79031560 - RMER6B LTR ERVK 0 461 1 1 1253 1879 145 41 3 chrX 87618739 87619078 -79031218 - MYSERV6-int LTR ERVK -1195 7764 7413 1 1253 2337 183 39 26 chrX 87619083 87619548 -79030748 - MYSERV6-int LTR ERVK -3490 5469 4999 1 1253 1897 176 47 89 chrX 87619619 87620167 -79030129 - MYSERV6-int LTR ERVK -3941 5018 4494 1 1253 4357 148 43 22 chrX 87620201 87621012 -79029284 - RMER17C-int LTR ERVK -1134 2104 1277 1 1253 1191 74 0 0 chrX 87621672 87621848 -79028448 + (GA)n Simple_repeat Simple_repeat 1 176 0 1 1253 5819 74 19 26 chrX 87622024 87622856 -79027440 + L1_Mus2 LINE L1 5741 6566 0 1 1253 311 286 39 48 chrX 87622901 87623004 -79027292 - RMER17C-int LTR ERVK -2702 536 435 1 1253 201 140 58 39 chrX 87623014 87623066 -79027230 + (CAAA)n Simple_repeat Simple_repeat 3 55 0 1 1253 1266 165 20 84 chrX 87623193 87623490 -79026806 - RMER17C-int LTR ERVK -2960 278 1 1 1253 1342 148 128 68 chrX 87623491 87623686 -79026610 - RMER17C LTR ERVK -3 407 188 1 1253 737 11 11 0 chrX 87623686 87623776 -79026520 + (GA)n Simple_repeat Simple_repeat 2 92 0 1 1253 1342 148 128 68 chrX 87623776 87623964 -79026332 - RMER17C LTR ERVK -223 187 1 1 1253 37848 31 0 0 chrX 87624002 87630662 -79019634 - L1Md_T LINE L1 0 6585 2 1 1253 5485 148 53 36 chrX 87630663 87631723 -79018573 - MYSERV6-int LTR ERVK -4478 4481 3404 1 1253 697 46 0 0 chrX 87631724 87631811 -79018485 - L1_Mus3 LINE L1 -800 5838 5752 1 1253 4793 98 4 1 chrX 87631818 87632505 -79017791 + L1_Mus1 LINE L1 5878 6566 -1 1 1253 5381 152 34 5 chrX 87632521 87632785 -79017511 - MYSERV6-int LTR ERVK -5543 3416 3153 1 1253 207 0 0 0 chrX 87632785 87632808 -79017488 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1 1253 5381 152 34 5 chrX 87632808 87633525 -79016771 - MYSERV6-int LTR ERVK -5807 3152 2408 1 1253 1232 207 54 14 chrX 87633538 87633817 -79016479 + RMER13A LTR ERVK 532 821 -39 1 1253 311 346 43 10 chrX 87633887 87634094 -79016202 + L1MC4 LINE L1 7688 7901 -141 1 1253 696 45 0 0 chrX 87634198 87634286 -79016010 + (TG)n Simple_repeat Simple_repeat 1 88 0 1 1253 29 70 0 0 chrX 87634789 87634846 -79015450 + AT_rich Low_complexity Low_complexity 1 57 0 1 1253 1251 288 43 56 chrX 87634847 87635738 -79014558 + L1MA9 LINE L1 5147 6041 -271 1 1253 659 281 40 45 chrX 87635754 87635952 -79014344 - B3 SINE B2 -7 209 13 1 1253 268 340 113 0 chrX 87635960 87636145 -79014151 + L1MA9 LINE L1 6024 6229 -83 1 1253 423 212 0 0 chrX 87636153 87636299 -79013997 + (TA)n Simple_repeat Simple_repeat 2 147 0 1 1253 24 0 0 0 chrX 87636334 87636358 -79013938 + AT_rich Low_complexity Low_complexity 1 24 0 1 1253 513 0 0 0 chrX 87637983 87638040 -79012256 + (TAAAA)n Simple_repeat Simple_repeat 2 58 0 1 1253 342 362 28 28 chrX 87639098 87639277 -79011019 - B3 SINE B2 -2 214 36 1 1253 2870 103 7 5 chrX 87639359 87639929 -79010367 - Lx2 LINE L1 -1018 5979 5406 1 1253 4287 96 39 5 chrX 87639929 87640578 -79009718 + L1_Mus4 LINE L1 5983 6636 0 1 1253 2289 189 27 86 chrX 87641356 87641912 -79008384 + L1_Mur2 LINE L1 22 544 -6168 1 1253 352 303 64 6 chrX 87641899 87642055 -79008241 + L1MC3 LINE L1 6307 6471 -1314 1 1253 36 41 0 40 chrX 87642116 87642192 -79008104 + AT_rich Low_complexity Low_complexity 1 73 0 1 1253 239 291 63 6 chrX 87642312 87642473 -79007823 + L1MC3 LINE L1 6902 7075 -710 1 1253 21 0 0 0 chrX 87642476 87642497 -79007799 + AT_rich Low_complexity Low_complexity 1 21 0 1 1253 11399 127 41 22 chrX 87642717 87644124 -79006172 + Lx4B LINE L1 917 2370 -3507 1 1253 3177 118 2 11 chrX 87644124 87644602 -79005694 + MT2C_Mm LTR ERVL 2 475 0 1 1253 11399 124 40 28 chrX 87644602 87645154 -79005142 + Lx4B LINE L1 2371 2895 -2982 1 1253 1038 65 14 7 chrX 87645154 87645293 -79005003 - B1_Mus1 SINE Alu -8 140 1 1 1253 11399 124 40 28 chrX 87645293 87645762 -79004534 + Lx4B LINE L1 2896 3377 -2500 1 1253 1403 141 76 8 chrX 87645772 87646036 -79004260 + Lx4B LINE L1 5035 5316 -561 1 1253 13435 54 2 0 chrX 87646037 87648413 -79001883 - L1Md_F2 LINE L1 -12 6570 4193 1 1253 6608 191 59 21 chrX 87648411 87650087 -79000209 + Lx4B LINE L1 5311 7020 -38 1 1253 508 241 183 50 chrX 87650087 87650327 -78999969 - RLTR10A LTR ERVK 0 411 140 1 1253 1759 214 17 26 chrX 87650367 87650853 -78999443 - RLTR45-int LTR ERVK -202 7042 6523 1 1253 450 296 0 0 chrX 87650958 87651114 -78999182 - RLTR45-int LTR ERVK -866 1121 992 1 1253 1662 319 56 53 chrX 87651127 87652771 -78997525 - RLTR45-int LTR ERVK -1661 4881 3234 1 1253 322 274 46 46 chrX 87652784 87652937 -78997359 - RLTR45-int LTR ERVK -4149 2393 2241 1 1253 381 229 62 35 chrX 87653108 87653221 -78997075 - RLTR10-int LTR ERVK -1554 433 318 1 1253 498 243 183 58 chrX 87653236 87653476 -78996820 - RLTR10A LTR ERVK -2 409 140 1 1253 276 218 29 19 chrX 87653551 87653577 -78996719 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1 1253 1113 95 0 0 chrX 87653577 87653724 -78996572 + B1_Mus2 SINE Alu 1 147 0 1 1253 276 218 29 19 chrX 87653724 87653800 -78996496 + (TAAA)n Simple_repeat Simple_repeat 3 80 0 1 1253 546 222 0 44 chrX 87653816 87653976 -78996320 + L1_Mur2 LINE L1 3329 3481 -2399 1 1253 281 47 23 0 chrX 87653976 87654019 -78996277 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 1253 11830 108 12 6 chrX 87654049 87656484 -78993812 + L1VL2 LINE L1 316 2767 -848 1 1253 4684 167 132 10 chrX 87656487 87657547 -78992749 + L1_Mur2 LINE L1 4206 5394 -483 1 1253 1302 175 72 65 chrX 87657544 87657837 -78992459 + Lx2 LINE L1 6269 6563 -434 1 1253 642 300 67 14 chrX 87657847 87658070 -78992226 + Lx6 LINE L1 6957 7191 -269 1 1253 2701 284 19 25 chrX 87658068 87658876 -78991420 - RMER1C Other Other -3 1339 537 1 1253 459 302 89 0 chrX 87658984 87659014 -78991282 - B2_Mm1a SINE B2 -9 184 153 2 1253 498 33 0 0 chrX 87659014 87659074 -78991222 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 1253 754 220 8 0 chrX 87659074 87659212 -78991084 - B3 SINE B2 -41 152 1 2 1253 384 360 22 37 chrX 87659212 87659483 -78990813 - L1MDb LINE L1 -5143 1266 1000 2 1253 828 221 98 5 chrX 87659707 87659912 -78990384 - URR1A DNA MER1_type -1 225 2 2 1253 261 326 108 8 chrX 87660066 87660196 -78990100 - MLT1D LTR MaLR -14 491 349 2 1253 224 110 0 131 chrX 87660683 87660767 -78989529 + A-rich Low_complexity Low_complexity 5 77 0 2 1253 313 336 98 24 chrX 87660797 87661084 -78989212 + L1MEc LINE L1 1174 1481 -4919 2 1253 192 40 0 0 chrX 87661356 87661381 -78988915 + (CAA)n Simple_repeat Simple_repeat 1 25 0 2 1253 459 35 0 0 chrX 87661487 87661544 -78988752 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1253 28 0 0 0 chrX 87662251 87662279 -78988017 + AT_rich Low_complexity Low_complexity 1 28 0 2 1253 291 247 0 0 chrX 87662336 87662409 -78987887 + (CAT)n Simple_repeat Simple_repeat 3 75 0 2 1253 750 97 0 0 chrX 87665616 87665719 -78984577 - L1_Mus4 LINE L1 -645 5991 5889 2 1253 478 169 0 0 chrX 87665722 87665805 -78984491 - L1_Mur1 LINE L1 -760 5126 5044 2 1253 617 69 9 38 chrX 87665815 87665921 -78984375 + Lx LINE L1 6545 6647 -7 2 1253 6934 175 28 17 chrX 87665934 87667603 -78982693 + Lx4A LINE L1 5352 7051 -7 2 1253 270 0 0 0 chrX 87667603 87667633 -78982663 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 2 1253 803 153 13 7 chrX 87667983 87668134 -78982162 - L1_Mus3 LINE L1 -27 6611 6460 2 1253 9336 179 49 43 chrX 87668164 87668694 -78981602 - L1_Mur2 LINE L1 -671 5206 4674 2 1253 1086 96 0 0 chrX 87668694 87668840 -78981456 - B1_Mus2 SINE Alu 0 147 2 2 1253 9336 179 49 43 chrX 87668840 87668989 -78981307 - L1_Mur2 LINE L1 -1204 4673 4527 2 1253 5118 150 59 12 chrX 87668989 87669904 -78980392 - RMER17B LTR ERVK 0 958 1 2 1253 9336 179 49 43 chrX 87669904 87671406 -78978890 - L1_Mur2 LINE L1 -1351 4526 3010 2 1253 478 68 27 27 chrX 87671533 87671608 -78978688 + ETnERV2-int LTR ERVK 7331 7405 -1 2 1253 2133 158 27 27 chrX 87671608 87672017 -78978279 + RLTR9E LTR ERVK 1 409 0 2 1253 17176 169 20 13 chrX 87672017 87675774 -78974522 + L1VL4 LINE L1 910 4695 -1188 2 1253 1754 133 7 14 chrX 87675775 87676058 -78974238 + RLTR9E LTR ERVK 1 281 -128 2 1253 5139 127 22 0 chrX 87676075 87676878 -78973418 + L1_Mus4 LINE L1 5798 6618 -18 2 1253 1322 251 21 44 chrX 87676884 87677267 -78973029 - RMER13B LTR ERVK -228 680 307 2 1253 663 181 284 0 chrX 87677515 87677670 -78972626 + B3 SINE B2 8 206 -10 2 1253 1322 226 205 21 chrX 87677855 87678324 -78971972 - RMER2 LTR ERV1 0 567 13 2 1253 667 264 28 42 chrX 87678880 87679097 -78971199 + B3 SINE B2 2 215 -1 2 1253 342 0 0 0 chrX 87681266 87681304 -78968992 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1253 1246 297 122 11 chrX 87681308 87681777 -78968519 - RMER1C Other Other -378 964 444 2 1253 361 382 77 8 chrX 87681774 87682009 -78968287 + Lx8 LINE L1 7074 7324 -149 2 1253 345 257 0 0 chrX 87682007 87682112 -78968184 + Lx9 LINE L1 7540 7644 0 2 1253 282 29 0 0 chrX 87682477 87682512 -78967784 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 156 35221 45 0 4 chrX 87682692 87687930 -78962366 + L1Md_T LINE L1 278 5589 -297 2 1254 8439 27 6 0 chrX 87687931 87688915 -78961381 + L1Md_T LINE L1 5591 6580 -5 2 1254 38 22 0 0 chrX 87689000 87689045 -78961251 + AT_rich Low_complexity Low_complexity 1 45 0 2 1254 31 115 0 0 chrX 87689111 87689268 -78961028 + AT_rich Low_complexity Low_complexity 1 157 0 2 1254 847 278 29 14 chrX 87689295 87689503 -78960793 + B3 SINE B2 6 216 0 2 1254 21 36 0 0 chrX 87689503 87689531 -78960765 + AT_rich Low_complexity Low_complexity 1 28 0 2 1254 25 31 0 0 chrX 87689597 87689629 -78960667 + AT_rich Low_complexity Low_complexity 1 32 0 2 1254 207 0 0 0 chrX 87690214 87690237 -78960059 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1254 2285 137 16 0 chrX 87690539 87690903 -78959393 - Lx LINE L1 0 6654 6285 2 1254 268 358 32 0 chrX 87691251 87691346 -78958950 + PB1D10 SINE Alu 5 102 -15 2 1254 682 235 93 12 chrX 87691373 87691545 -78958751 + B3A SINE B2 2 187 -11 2 1254 286 194 15 0 chrX 87691649 87691716 -78958580 + Lx9 LINE L1 7573 7640 -4 2 1254 757 264 0 82 chrX 87691937 87692032 -78958264 + B4A SINE B4 2 93 -199 2 1254 779 221 89 35 chrX 87692032 87692234 -78958062 + B3 SINE B2 1 213 -3 2 1254 757 264 0 82 chrX 87692234 87692357 -78957939 + B4A SINE B4 94 202 -90 2 1254 23 54 0 0 chrX 87694246 87694283 -78956013 + AT_rich Low_complexity Low_complexity 1 37 0 2 1254 770 258 159 23 chrX 87694536 87695108 -78955188 - L1M2 LINE L1 -925 5218 4569 2 1254 272 319 14 0 chrX 87695137 87695206 -78955090 - ID4_ SINE ID -13 70 1 2 1254 291 239 69 31 chrX 87695207 87695367 -78954929 - L1M2 LINE L1 -1587 4553 4388 2 1254 558 106 0 71 chrX 87695375 87695487 -78954809 - Lx LINE L1 -7 6647 6544 2 1254 2654 209 13 62 chrX 87695487 87695800 -78954496 - RMER19B LTR ERVK -378 524 241 2 1254 252 0 0 0 chrX 87695800 87695828 -78954468 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2 1254 2654 209 13 62 chrX 87695828 87696065 -78954231 - RMER19B LTR ERVK -662 240 1 2 1254 245 189 75 75 chrX 87696132 87696212 -78954084 + L1M5 LINE L1 5387 5466 -696 2 1254 189 0 0 0 chrX 87696250 87696271 -78954025 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1254 399 89 0 0 chrX 87696274 87696330 -78953966 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1254 2726 71 0 0 chrX 87696445 87696799 -78953497 - L1_Mm LINE L1 -1026 4857 4504 2 1254 18211 97 17 10 chrX 87696797 87699454 -78950842 + L1_Mm LINE L1 2911 5586 -297 2 1254 7257 81 11 3 chrX 87699454 87700442 -78949854 + L1Md_F2 LINE L1 5587 6582 0 2 1254 7817 175 23 10 chrX 87700443 87702028 -78948268 - L1_Mur2 LINE L1 -1221 4656 3051 2 1254 3707 176 80 84 chrX 87702053 87703738 -78946558 - L1VL2 LINE L1 -1849 1766 66 2 1254 5744 146 91 70 chrX 87703755 87703985 -78946311 - RMER17C-int LTR ERVK -419 2819 2592 2 1254 282 184 0 20 chrX 87703985 87704035 -78946261 + LSU-rRNA_Hsa rRNA rRNA 4202 4250 -785 2 1254 5744 146 91 70 chrX 87704035 87705280 -78945016 - RMER17C-int LTR ERVK -419 2591 1355 2 1254 1559 273 75 123 chrX 87705289 87705564 -78944732 - RMER17C-int LTR ERVK -1746 1492 1232 2 1254 2762 108 19 5 chrX 87705564 87705993 -78944303 + L1_Mus3 LINE L1 6201 6635 -3 2 1254 1559 273 75 123 chrX 87705993 87706973 -78943323 - RMER17C-int LTR ERVK -2007 1231 299 2 1254 457 191 18 0 chrX 87707043 87707153 -78943143 + G-rich Low_complexity Low_complexity 1 112 0 2 1254 8030 179 58 8 chrX 87707162 87709972 -78940324 + Lx4B LINE L1 4131 7054 -4 2 1254 288 258 106 26 chrX 87709988 87710242 -78940054 + L1MD LINE L1 5204 5481 -852 2 1254 213 180 0 32 chrX 87710469 87710532 -78939764 + (TAA)n Simple_repeat Simple_repeat 3 63 0 2 1254 24 32 0 0 chrX 87710616 87710647 -78939649 + AT_rich Low_complexity Low_complexity 1 31 0 2 1254 27 0 0 0 chrX 87710880 87710907 -78939389 + AT_rich Low_complexity Low_complexity 1 27 0 2 1254 46 33 0 0 chrX 87711099 87711159 -78939137 + AT_rich Low_complexity Low_complexity 1 60 0 2 1254 477 34 0 0 chrX 87711159 87711218 -78939078 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1254 499 298 23 8 chrX 87711235 87711367 -78938929 - RSINE1 SINE B4 -21 144 11 2 1254 23 101 0 0 chrX 87712618 87712697 -78937599 + AT_rich Low_complexity Low_complexity 1 79 0 2 1254 568 244 0 31 chrX 87712847 87712861 -78937435 - B1_Mur3 SINE Alu 0 149 138 2 1254 261 0 0 0 chrX 87712861 87712890 -78937406 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2 1254 568 244 0 31 chrX 87712890 87713002 -78937294 - B1_Mur3 SINE Alu -12 137 27 2 1254 2706 72 18 16 chrX 87713270 87713578 -78936718 - L1_Mus1 LINE L1 -1 6566 6257 2 1254 2899 41 3 0 chrX 87713578 87713923 -78936373 - ORR1A0 LTR MaLR 0 346 1 2 1254 2706 72 18 16 chrX 87713923 87713995 -78936301 - L1_Mus1 LINE L1 -311 6256 6185 2 1254 22 88 0 0 chrX 87714127 87714184 -78936112 + AT_rich Low_complexity Low_complexity 1 57 0 2 1254 414 0 0 0 chrX 87714442 87714488 -78935808 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1254 5883 212 29 14 chrX 87714572 87715812 -78934484 - Lx5 LINE L1 -48 7002 5745 2 1254 1575 158 4 0 chrX 87715810 87716063 -78934233 + Lx5 LINE L1 5498 5751 -126 2 1254 3704 141 29 27 chrX 87716397 87717026 -78933270 + Lx2 LINE L1 6360 6989 -8 2 1254 4346 128 3 1 chrX 87717128 87717793 -78932503 + L1_Mus2 LINE L1 5191 5856 -27 2 1254 898 107 0 0 chrX 87717791 87717931 -78932365 + L1_Mus2 LINE L1 6425 6564 -2 2 1254 1817 70 12 4 chrX 87717932 87718176 -78932120 + L1_Mus2 LINE L1 5863 6108 -458 2 1254 2962 107 39 117 chrX 87718322 87718885 -78931411 + MURVY-LTR LTR ERV1 1 519 0 2 1254 377 273 4 137 chrX 87718885 87719140 -78931156 + MMERGLN-int LTR ERV1 3 223 -4840 2 1254 594 108 177 10 chrX 87719351 87719481 -78930815 + B2_Mm1t SINE B2 38 192 -1 2 1254 4795 296 52 41 chrX 87719491 87721818 -78928478 + MMERGLN-int LTR ERV1 547 2962 -4594 2 1254 1300 279 50 30 chrX 87721817 87722354 -78927942 + MuRRS4-int LTR ERV1 4548 5021 -42 2 1254 3362 85 2 121 chrX 87722355 87722944 -78927352 + MURVY-LTR LTR ERV1 1 519 0 2 1254 259 270 0 0 chrX 87723110 87723173 -78927123 + (TA)n Simple_repeat Simple_repeat 1 63 0 2 1254 736 324 5 19 chrX 87723185 87723399 -78926897 - B3 SINE B2 -5 211 1 2 1254 302 351 54 12 chrX 87723403 87723570 -78926726 + L1MCa LINE L1 1600 1773 -4735 2 1254 405 156 0 0 chrX 87723588 87723665 -78926631 + (TAAA)n Simple_repeat Simple_repeat 1 77 0 2 1254 221 118 12 95 chrX 87724130 87724214 -78926082 + A-rich Low_complexity Low_complexity 5 81 0 2 1254 320 274 35 17 chrX 87724472 87724587 -78925709 + L1MC4 LINE L1 6645 6761 -1281 2 1254 3433 147 159 52 chrX 87725070 87726384 -78923912 - L1_Mur1 LINE L1 -4056 1830 16 2 1254 582 275 105 23 chrX 87726385 87726728 -78923568 - L1_Rod LINE L1 -3918 1929 1559 2 1254 1421 174 50 0 chrX 87726789 87727070 -78923226 - Lx2 LINE L1 0 6997 6703 2 1254 236 263 29 29 chrX 87727238 87727340 -78922956 + L1_Rod LINE L1 5708 5809 -38 2 1254 7500 64 2 6 chrX 87727734 87728699 -78921597 - L1Md_F2 LINE L1 -1 6581 5621 2 1254 7797 58 7 0 chrX 87728696 87729680 -78920616 + L1_Mm LINE L1 4742 5732 -151 2 1254 1247 306 138 51 chrX 87729794 87730542 -78919754 - Lx8 LINE L1 -19 7454 6642 3 1254 819 262 131 50 chrX 87730579 87730937 -78919359 - Lx7 LINE L1 -1672 5972 5589 3 1254 21 0 0 0 chrX 87731167 87731188 -78919108 + AT_rich Low_complexity Low_complexity 1 21 0 3 1254 21 36 0 0 chrX 87731469 87731497 -78918799 + AT_rich Low_complexity Low_complexity 1 28 0 3 1254 2178 277 5 34 chrX 87732055 87732612 -78917684 - Lx6 LINE L1 -8 7452 6912 3 1254 21 57 0 0 chrX 87732693 87732728 -78917568 + AT_rich Low_complexity Low_complexity 1 35 0 3 1254 1075 96 7 0 chrX 87733099 87733245 -78917051 + B1_Mm SINE Alu 1 147 0 3 1254 475 81 11 11 chrX 87733245 87733332 -78916964 + (CAAAA)n Simple_repeat Simple_repeat 5 91 0 3 1254 4521 58 2 0 chrX 87733553 87734118 -78916178 + L1_Mus1 LINE L1 6002 6567 0 3 1254 25 0 0 0 chrX 87734118 87734143 -78916153 + AT_rich Low_complexity Low_complexity 1 25 0 3 1254 1071 157 0 0 chrX 87734207 87734379 -78915917 + URR1A DNA MER1_type 55 226 0 3 1254 24 0 0 0 chrX 87735329 87735353 -78914943 + AT_rich Low_complexity Low_complexity 1 24 0 3 1254 1129 115 0 5 chrX 87735353 87735537 -78914759 + L1_Mus4 LINE L1 6437 6619 -17 3 1254 225 0 0 0 chrX 87735537 87735562 -78914734 + (TAA)n Simple_repeat Simple_repeat 3 27 0 3 1254 26 30 0 0 chrX 87735770 87735803 -78914493 + AT_rich Low_complexity Low_complexity 1 33 0 3 1254 342 45 0 0 chrX 87735903 87735947 -78914349 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 1254 290 338 65 19 chrX 87736003 87736157 -78914139 + MER58B DNA MER1_type 161 321 -20 3 1254 255 331 22 65 chrX 87736498 87736637 -78913659 - MER20 DNA MER1_type -72 147 15 3 1254 4520 161 41 2 chrX 87736998 87737785 -78912511 + Lx2B LINE L1 6181 6997 -3 3 1254 23 0 0 0 chrX 87738222 87738245 -78912051 + AT_rich Low_complexity Low_complexity 1 23 0 3 1254 24 53 0 0 chrX 87738975 87739013 -78911283 + AT_rich Low_complexity Low_complexity 1 38 0 3 1254 555 283 73 55 chrX 87740046 87740319 -78909977 - Lx8 LINE L1 0 7473 7196 3 1254 1815 282 29 6 chrX 87740313 87740838 -78909458 - Lx8 LINE L1 -481 6992 6456 3 1254 3119 141 26 46 chrX 87740846 87741626 -78908670 - L1VL4 LINE L1 -2435 1124 365 3 1254 285 187 0 0 chrX 87741679 87741754 -78908542 + CT-rich Low_complexity Low_complexity 2 76 0 3 1254 5147 82 9 0 chrX 87741844 87742542 -78907754 + L1_Mus3 LINE L1 5934 6637 -1 3 1254 207 139 0 0 chrX 87743237 87743273 -78907023 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1254 256 197 65 16 chrX 87743301 87743425 -78906871 + (TA)n Simple_repeat Simple_repeat 2 131 0 3 1254 349 384 65 44 chrX 87743443 87743691 -78906605 - MLT1J-int LTR MaLR -996 391 139 3 1254 401 337 71 35 chrX 87744337 87744506 -78905790 + B3 SINE B2 42 216 0 3 1254 228 286 13 108 chrX 87744529 87744686 -78905610 - MIR SINE MIR -14 248 107 3 1254 1505 288 39 5 chrX 87744788 87745204 -78905092 + Lx6 LINE L1 7005 7434 -26 3 1254 4837 222 47 46 chrX 87745381 87746714 -78903582 + Lx7 LINE L1 72 1437 -4443 3 1254 627 14 0 0 chrX 87746714 87746786 -78903510 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 3 1254 4592 175 41 171 chrX 87746786 87746852 -78903444 + Lx7 LINE L1 1438 1500 -4380 3 1254 572 262 8 0 chrX 87746852 87746978 -78903318 + B1_Mur3 SINE Alu 23 149 0 3 1254 4592 175 41 171 chrX 87746978 87747205 -78903091 + Lx7 LINE L1 1501 1718 -4162 3 1254 6615 132 23 46 chrX 87747205 87748400 -78901896 + Lx3_Mus LINE L1 5841 7008 -1 3 1254 4592 175 41 171 chrX 87748400 87748652 -78901644 + Lx7 LINE L1 1719 1939 -3941 3 1254 1153 75 0 0 chrX 87748652 87748799 -78901497 + B1_Mm SINE Alu 1 147 0 3 1254 4592 175 41 171 chrX 87748799 87749621 -78900675 + Lx7 LINE L1 1940 2705 -3175 3 1254 6188 211 85 25 chrX 87749617 87751422 -78898874 + Lx7 LINE L1 5426 7341 -355 3 1254 741 95 58 7 chrX 87751467 87751605 -78898691 + Lx LINE L1 6503 6647 -7 3 1254 1011 231 69 31 chrX 87751653 87751971 -78898325 + Lx7 LINE L1 7367 7696 0 3 1254 799 78 14 41 chrX 87752587 87752733 -78897563 - L1_Mus3 LINE L1 -1 6637 6496 3 1254 230 364 65 24 chrX 87753257 87753381 -78896915 - MLT1G3 LTR MaLR -203 392 264 3 1254 385 323 12 65 chrX 87754038 87754207 -78896089 - MTEb LTR MaLR -200 179 20 3 1254 2555 139 28 5 chrX 87754672 87755098 -78895198 - L1_Mus4 LINE L1 -6 6630 6195 3 1254 1067 95 0 13 chrX 87755376 87755525 -78894771 - B1_Mm SINE Alu 0 147 1 3 1254 1655 49 0 0 chrX 87755809 87756013 -78894283 + MT2C_Mm LTR ERVL 1 204 -271 3 1254 314 0 0 0 chrX 87756009 87756045 -78894251 + MT2_Mm LTR ERVL 458 493 0 3 1254 243 380 0 0 chrX 87756882 87756957 -78893339 + B3A SINE B2 92 168 -30 3 1254 270 56 0 0 chrX 87756961 87756997 -78893299 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1254 6511 82 11 6 chrX 87757021 87757973 -78892323 + L1_Mus3 LINE L1 5536 6492 -146 3 1254 3527 53 0 0 chrX 87758074 87758509 -78891787 + L1Md_F2 LINE L1 6136 6570 -12 3 1254 210 222 0 0 chrX 87759997 87760042 -78890254 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 3 1254 190 227 0 8 chrX 87760604 87760650 -78889646 - MIR SINE MIR -113 163 114 3 1254 1539 33 0 11 chrX 87760683 87760868 -78889428 + B2_Mm1a SINE B2 2 184 -9 3 1254 207 196 0 0 chrX 87762246 87762292 -78888004 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1254 378 351 123 104 chrX 87762422 87762788 -78887508 + MLT1G1 LTR MaLR 154 526 -53 3 1254 577 390 24 8 chrX 87763220 87763468 -78886828 + B4A SINE B4 6 257 -35 3 1254 8305 81 6 4 chrX 87763535 87764671 -78885625 + L1Md_F2 LINE L1 4448 5585 -298 3 1254 7675 63 10 2 chrX 87764672 87765647 -78884649 + L1Md_F2 LINE L1 5587 6569 -13 3 1254 7689 145 63 17 chrX 87766207 87768052 -78882244 + Lx3C LINE L1 5076 6974 -2 3 1254 1246 132 0 0 chrX 87768123 87768327 -78881969 + Lx2A1 LINE L1 6800 7003 -5 3 1254 183 129 0 0 chrX 87768597 87768628 -78881668 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1254 352 335 74 27 chrX 87768629 87768935 -78881361 + L1M4c LINE L1 1220 1780 -4523 3 1254 685 275 22 27 chrX 87769236 87769383 -78880913 + RSINE1 SINE B4 3 153 -12 3 1254 277 255 30 20 chrX 87769449 87769549 -78880747 + L1ME3B LINE L1 5799 5899 -341 3 1254 289 262 182 59 chrX 87769965 87770135 -78880161 + B3A SINE B2 1 191 -7 3 1254 40608 12 2 6 chrX 87770295 87776498 -78873798 - L1Md_A LINE L1 0 6582 412 3 1254 21 0 0 0 chrX 87776647 87776668 -78873628 + AT_rich Low_complexity Low_complexity 1 21 0 3 1254 306 0 0 0 chrX 87777447 87777481 -78872815 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 1254 1627 134 0 19 chrX 87777741 87777999 -78872297 - ORR1A2 LTR MaLR -74 253 1 3 1254 6466 112 55 6 chrX 87777999 87778301 -78871995 - ORR1A2-int LTR MaLR 0 1963 1666 3 1254 399 21 0 0 chrX 87778301 87778349 -78871947 + (GA)n Simple_repeat Simple_repeat 2 49 0 3 1254 6466 114 55 8 chrX 87778349 87779112 -78871184 - ORR1A2-int LTR MaLR -298 1665 281 3 1254 1094 95 0 0 chrX 87779112 87779260 -78871036 - B1_Mus1 SINE Alu 0 148 1 3 1254 2714 196 76 133 chrX 87779260 87779568 -78870728 - ORR1A2-int LTR MaLR -978 280 1 3 1254 1468 65 5 15 chrX 87779568 87779770 -78870526 - ORR1A2 LTR MaLR 0 327 128 3 1254 644 107 11 4 chrX 87779921 87780035 -78870261 + B1_Mus1 SINE Alu 3 120 0 3 1254 317 78 76 34 chrX 87780039 87780158 -78870138 + A-rich Low_complexity Low_complexity 2 125 0 3 1254 5402 103 42 8 chrX 87780159 87780988 -78869308 + Lx3_Mus LINE L1 6153 7009 0 3 1254 183 200 57 0 chrX 87781298 87781333 -78868963 + MIRm SINE MIR 119 155 -121 3 1254 465 19 0 0 chrX 87781634 87781688 -78868608 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 1254 16691 129 33 44 chrX 87781723 87783967 -78866329 - Lx3C LINE L1 -2 6974 4677 3 1254 198 0 0 0 chrX 87783967 87783989 -78866307 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 3 1254 16691 106 16 80 chrX 87783989 87785376 -78864920 - Lx3C LINE L1 -1210 4676 3487 3 1254 531 0 0 0 chrX 87785376 87785435 -78864861 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 3 1254 16691 106 16 80 chrX 87785435 87785832 -78864464 - Lx3C LINE L1 -2400 3486 3075 3 1254 1003 236 8 91 chrX 87785827 87786259 -78864037 - L1_Mur1 LINE L1 -6665 317 1 3 1254 380 268 190 6 chrX 87786469 87786627 -78863669 + B3A SINE B2 1 187 -11 3 1254 429 168 246 22 chrX 87786917 87787051 -78863245 + Lx8 LINE L1 7303 7466 -7 3 1254 26 0 0 0 chrX 87787068 87787094 -78863202 + AT_rich Low_complexity Low_complexity 1 26 0 3 1254 797 224 6 23 chrX 87788306 87788480 -78861816 + MER5B DNA MER1_type 1 171 -7 3 1254 269 200 52 26 chrX 87789774 87789851 -78860445 - Lx5 LINE L1 -11 7039 6961 3 1254 999 219 198 0 chrX 87789850 87790087 -78860209 + Lx5 LINE L1 6644 6927 -123 3 1254 21 0 0 0 chrX 87791132 87791153 -78859143 + AT_rich Low_complexity Low_complexity 1 21 0 3 1254 1374 113 15 5 chrX 87792667 87792871 -78857425 - L1_Mus3 LINE L1 -347 6291 6086 3 1254 2693 92 13 3 chrX 87792871 87793253 -78857043 + L1_Mus3 LINE L1 6250 6635 -3 3 1254 468 35 0 0 chrX 87793632 87793690 -78856606 + (TTAAA)n Simple_repeat Simple_repeat 3 60 0 3 1254 237 229 31 10 chrX 87793705 87793802 -78856494 + A-rich Low_complexity Low_complexity 1 99 0 3 1254 22 0 0 0 chrX 87794405 87794427 -78855869 + AT_rich Low_complexity Low_complexity 1 22 0 3 1254 207 273 14 61 chrX 87794692 87794840 -78855456 + A-rich Low_complexity Low_complexity 5 145 0 3 1254 254 294 49 0 chrX 87795066 87795168 -78855128 + L1M3 LINE L1 3621 3727 -2413 3 1254 28813 123 12 5 chrX 87795179 87799836 -78850460 - L1Md_F LINE L1 -80 5803 1130 3 1254 2529 101 112 7 chrX 87799836 87800266 -78850030 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1254 2865 203 46 72 chrX 87800266 87800874 -78849422 - L1Md_F LINE L1 -5487 1129 519 3 1254 5271 201 58 12 chrX 87800879 87802165 -78848131 + L1_Mur2 LINE L1 4054 5399 -478 3 1254 783 291 16 24 chrX 87802223 87802470 -78847826 + Lx6 LINE L1 7180 7424 -36 3 1254 1999 231 48 5 chrX 87802485 87802906 -78847390 + RMER15 LTR ERVL 137 575 0 3 1254 648 294 15 75 chrX 87802950 87803149 -78847147 + ORR1D2 LTR MaLR 1 187 -183 3 1254 202 213 0 0 chrX 87803150 87803197 -78847099 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 3 1254 289 287 108 54 chrX 87803198 87803327 -78846969 + ORR1D2 LTR MaLR 204 339 -40 3 1254 290 257 44 9 chrX 87803330 87803339 -78846957 + (TATATG)n Simple_repeat Simple_repeat 4 12 0 3 1254 438 108 0 0 chrX 87803339 87803404 -78846892 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 1254 290 257 44 9 chrX 87803404 87803508 -78846788 + (TATATG)n Simple_repeat Simple_repeat 4 111 0 3 1254 285 100 0 0 chrX 87803529 87803579 -78846717 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1254 399 41 0 0 chrX 87803579 87803627 -78846669 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1254 540 341 68 0 chrX 87803627 87803803 -78846493 - B3 SINE B2 -28 188 1 4 1254 387 323 124 21 chrX 87803867 87804060 -78846236 + MTE-int LTR MaLR 1363 1575 -5 4 1254 681 353 51 22 chrX 87804081 87804394 -78845902 + MTEa LTR MaLR 39 360 -19 4 1254 321 26 0 0 chrX 87804394 87804432 -78845864 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1254 260 281 12 24 chrX 87804434 87804518 -78845778 + (TATATG)n Simple_repeat Simple_repeat 2 84 0 4 1254 8121 95 1 3 chrX 87804893 87806087 -78844209 + L1Md_F2 LINE L1 2798 3988 -1895 4 1254 9922 80 3 11 chrX 87806068 87807901 -78842395 + L1Md_F2 LINE L1 4503 6314 -268 4 1254 22549 84 8 21 chrX 87807901 87811765 -78838531 - L1Md_F LINE L1 -1568 4315 504 4 1254 1117 88 0 0 chrX 87811889 87812037 -78838259 - B1_Mus1 SINE Alu 0 148 1 4 1254 2566 146 31 56 chrX 87812129 87812284 -78838012 + RLTR31B_Mm LTR ERVK 4 160 -397 4 1254 2864 92 10 0 chrX 87812284 87812687 -78837609 + L1_Mus3 LINE L1 6225 6631 -7 4 1254 2566 146 31 56 chrX 87812687 87813011 -78837285 + RLTR31B_Mm LTR ERVK 161 471 -86 4 1254 284 196 11 11 chrX 87813210 87813303 -78836993 + L1_Mur2 LINE L1 1129 1221 -6507 4 1254 1800 198 66 12 chrX 87813288 87813876 -78836420 + L1_Mur2 LINE L1 1087 1718 -4162 4 1254 951 252 8 8 chrX 87813873 87814133 -78836163 + L1_Mur2 LINE L1 2143 2402 -3475 4 1254 243 79 0 0 chrX 87814138 87814176 -78836120 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 4 1254 1801 145 19 25 chrX 87814223 87814548 -78835748 - L1_Mus4 LINE L1 -5 6631 6309 4 1254 1891 236 41 14 chrX 87814548 87814575 -78835721 + L1_Mur2 LINE L1 2767 2793 -3087 4 1254 252 86 0 0 chrX 87814575 87814610 -78835686 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 4 1254 1891 236 41 14 chrX 87814610 87815137 -78835159 + L1_Mur2 LINE L1 2794 3335 -2545 4 1254 3149 208 8 66 chrX 87815137 87815863 -78834433 + L1_Mur2 LINE L1 66 749 -5963 4 1254 2252 138 6 0 chrX 87815887 87816248 -78834048 + L1_Mus2 LINE L1 6204 6566 0 4 1254 396 319 105 24 chrX 87816260 87816680 -78833616 + L1MB7 LINE L1 5667 6120 -64 4 1254 278 351 56 50 chrX 87816852 87817032 -78833264 - ORR1E LTR MaLR -164 195 15 4 1254 3404 82 12 64 chrX 87817092 87817611 -78832685 + MT2_Mm LTR ERVL 2 493 0 4 156 43831 39 17 7 chrX 87817612 87820777 -78829519 + MERVL-int LTR ERVL 3 3201 -2284 4 1255 2828 15 0 21 chrX 87820777 87821111 -78829185 - IAPLTR2b LTR ERVK 0 327 1 4 1255 43831 39 17 7 chrX 87821111 87823263 -78827033 + MERVL-int LTR ERVL 3202 5371 -114 4 1255 371 111 26 53 chrX 87823263 87823339 -78826957 + ORR1A3-int LTR MaLR 567 640 -1323 4 1255 314 0 0 0 chrX 87823339 87823377 -78826919 + MERVL-int LTR ERVL 5448 5485 0 4 1255 4416 14 0 0 chrX 87823377 87823870 -78826426 + MT2_Mm LTR ERVL 1 493 0 4 1255 2645 145 119 4 chrX 87823870 87824409 -78825887 + L1_Mur2 LINE L1 2418 3018 -2859 4 1255 16878 105 17 16 chrX 87824402 87827764 -78822532 + L1VL4 LINE L1 194 3559 0 4 1255 9915 173 40 7 chrX 87827895 87829914 -78820382 + L1_Mur2 LINE L1 3001 5085 -792 4 1255 677 277 48 15 chrX 87829949 87830220 -78820076 + L1_Mur3 LINE L1 3647 3926 -1954 4 1255 785 263 57 15 chrX 87830254 87830590 -78819706 + L1_Rod LINE L1 5048 5397 -450 4 1255 475 368 70 16 chrX 87830604 87830919 -78819377 + Lx8 LINE L1 6997 7328 -145 4 1255 207 0 0 0 chrX 87831083 87831106 -78819190 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 4 1255 279 317 0 0 chrX 87831625 87831707 -78818589 - MIR3 SINE MIR -9 199 118 4 1255 2240 36 7 0 chrX 87832156 87832432 -78817864 - L1Md_F2 LINE L1 -12 6570 6293 4 1255 22 56 0 0 chrX 87833946 87833982 -78816314 + AT_rich Low_complexity Low_complexity 1 36 0 4 1255 747 143 198 19 chrX 87834075 87834232 -78816064 + B2_Mm2 SINE B2 2 186 -9 4 1255 219 200 0 58 chrX 87835126 87835195 -78815101 + T-rich Low_complexity Low_complexity 4 68 0 4 1255 4314 117 31 6 chrX 87835264 87835937 -78814359 - L1_Mus3 LINE L1 -2 6636 5947 4 1255 540 213 0 0 chrX 87836168 87836290 -78814006 + (TA)n Simple_repeat Simple_repeat 2 123 0 4 1255 674 183 172 5 chrX 87836833 87837025 -78813271 - URR1A DNA MER1_type 0 226 3 4 1255 32011 95 4 14 chrX 87837544 87842025 -78808271 - L1Md_F2 LINE L1 -3 6582 2123 4 1255 1711 47 0 0 chrX 87842025 87842237 -78808059 + L1Md_T LINE L1 6369 6580 -2 4 1255 32011 100 7 13 chrX 87842237 87843479 -78806817 - L1Md_F2 LINE L1 -3764 2122 822 4 1255 1328 181 44 12 chrX 87843479 87843730 -78806566 - L1VL1 LINE L1 -6133 289 31 4 1255 259 316 158 59 chrX 87843850 87843951 -78806345 - B1F2 SINE Alu -6 143 33 4 1255 1405 101 87 0 chrX 87844225 87844433 -78805863 - MERVL-int LTR ERVL -2078 3407 3182 4 1255 645 175 8 0 chrX 87844434 87844560 -78805736 - L1_Mm LINE L1 -889 4994 4868 4 1255 930 170 7 0 chrX 87844562 87844715 -78805581 + B2_Mm1t SINE B2 2 155 -38 4 1255 949 100 7 35 chrX 87844721 87844851 -78805445 + B1_Mus1 SINE Alu 7 136 -12 4 1255 183 42 0 0 chrX 87844851 87844875 -78805421 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1255 949 100 7 35 chrX 87844875 87844889 -78805407 + B1_Mus1 SINE Alu 137 147 -1 4 1255 914 159 12 0 chrX 87844895 87845035 -78805261 - L1_Mm LINE L1 -1007 4876 4737 4 1255 206 32 32 0 chrX 87845035 87845066 -78805230 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 4 1255 914 159 12 0 chrX 87845066 87845088 -78805208 - L1_Mm LINE L1 -1147 4736 4713 4 1255 614 190 127 53 chrX 87845090 87845240 -78805056 - MT2B LTR ERVL -435 166 6 4 1255 664 90 0 0 chrX 87845267 87845356 -78804940 - ORR1A2 LTR MaLR 0 326 238 4 1255 3195 124 2 10 chrX 87845356 87845843 -78804453 + RLTR1C LTR ERV1 1 483 -20 4 1255 743 129 17 8 chrX 87845863 87845980 -78804316 - ORR1A2 LTR MaLR -86 241 124 4 1255 216 286 0 114 chrX 87846516 87846595 -78803701 - B1F2 SINE Alu -65 84 15 4 1255 1721 284 38 102 chrX 87848627 87849185 -78801111 - Lx9 LINE L1 -203 7441 6883 4 1255 239 192 0 37 chrX 87849185 87849239 -78801057 + U6 snRNA snRNA 1 52 -55 4 1255 1721 284 38 102 chrX 87849239 87849422 -78800874 - Lx9 LINE L1 -203 6882 6698 4 1255 553 291 69 14 chrX 87849625 87849841 -78800455 - Lx8 LINE L1 -349 7124 6897 4 1255 495 0 0 0 chrX 87849956 87850011 -78800285 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1255 2692 238 55 13 chrX 87850017 87850638 -78799658 + Lx7 LINE L1 6360 7006 -690 4 1255 1004 263 131 35 chrX 87850635 87851092 -78799204 - Lx7 LINE L1 -1209 6487 5987 4 1255 511 244 0 0 chrX 87851086 87851209 -78799087 - L1_Mur3 LINE L1 -975 4905 4783 4 1255 40705 11 1 6 chrX 87851287 87857486 -78792810 - L1Md_A LINE L1 0 6582 422 4 1255 1428 295 36 28 chrX 87857496 87857991 -78792305 + Lx7 LINE L1 6640 7138 -558 4 1255 1894 184 83 14 chrX 87858043 87858478 -78791818 + RMER6D LTR ERVK 1 465 -255 4 1255 209 220 17 0 chrX 87858494 87858553 -78791743 + (CAGTT)n Simple_repeat Simple_repeat 5 64 0 4 1255 4867 126 4 8 chrX 87858587 87859682 -78790614 - Lx LINE L1 -361 6293 5203 4 1255 3149 177 22 2 chrX 87859681 87860275 -78790021 + Lx LINE L1 4595 5200 -683 4 1255 599 343 130 37 chrX 87860402 87860738 -78789558 - MLT1E1A LTR MaLR -20 660 292 4 1255 608 59 12 0 chrX 87860738 87860823 -78789473 + (TC)n Simple_repeat Simple_repeat 1 86 0 4 1255 599 343 130 37 chrX 87860823 87860840 -78789456 - MLT1E1A LTR MaLR -389 291 275 4 1255 362 219 171 19 chrX 87861831 87861958 -78788338 + PB1D9 SINE Alu 7 147 -2 4 1255 446 305 121 43 chrX 87861977 87862282 -78788014 - L1M4c LINE L1 -4698 1686 1358 4 1255 192 125 0 0 chrX 87862442 87862474 -78787822 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1255 279 256 45 34 chrX 87862484 87862573 -78787723 - Lx9 LINE L1 -171 7473 7384 4 1255 3947 59 0 2 chrX 87862842 87863337 -78786959 - L1Md_F3 LINE L1 -145 5738 5245 4 1255 6538 37 5 4 chrX 87863337 87864141 -78786155 + L1Md_F3 LINE L1 5766 6570 -14 4 1255 420 37 0 0 chrX 87864313 87864367 -78785929 + (GTTTG)n Simple_repeat Simple_repeat 2 55 0 4 1255 1144 69 0 0 chrX 87864367 87864504 -78785792 - B1_Mus1 SINE Alu -8 140 4 4 1255 432 0 0 0 chrX 87865160 87865208 -78785088 + (TAA)n Simple_repeat Simple_repeat 3 50 0 4 1255 23 0 0 0 chrX 87865208 87865231 -78785065 + AT_rich Low_complexity Low_complexity 1 23 0 4 1255 395 315 46 0 chrX 87865269 87865377 -78784919 - RSINE1 SINE B4 -8 157 45 4 1255 798 273 130 82 chrX 87865994 87866324 -78783972 - ORR1D2 LTR MaLR -3 364 32 4 1255 287 359 26 46 chrX 87867008 87867160 -78783136 - B1F2 SINE Alu 0 149 1 4 1255 249 98 0 0 chrX 87868089 87868130 -78782166 + (CAAAA)n Simple_repeat Simple_repeat 5 45 0 4 1255 402 307 61 7 chrX 87868172 87868422 -78781874 - Lx7 LINE L1 -1870 5826 5589 4 1255 1007 101 0 7 chrX 87868438 87868494 -78781802 + Lx3_Mus LINE L1 5863 5918 -1091 4 1255 330 26 0 0 chrX 87868494 87868533 -78781763 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1255 1007 101 0 7 chrX 87868533 87868625 -78781671 + Lx3_Mus LINE L1 5919 6010 -999 4 1255 21 36 0 0 chrX 87869011 87869039 -78781257 + AT_rich Low_complexity Low_complexity 1 28 0 4 1255 225 0 0 0 chrX 87869474 87869499 -78780797 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 4 1255 3252 75 12 0 chrX 87869554 87869980 -78780316 - L1_Mus2 LINE L1 -2 6564 6134 4 1255 2885 20 2 186 chrX 87869980 87870458 -78779838 + RLTR10 LTR ERVK 1 390 0 4 1255 331 109 0 0 chrX 87870458 87870513 -78779783 + RLTR10-int LTR ERVK 1 55 -1932 4 1255 16053 33 7 33 chrX 87870513 87872539 -78777757 + RLTR10-int LTR ERVK 11 1984 -3 4 1255 2936 23 2 154 chrX 87872541 87873001 -78777295 + RLTR10 LTR ERVK 1 390 0 4 1255 27949 123 7 25 chrX 87873001 87877978 -78772318 - L1_Mus2 LINE L1 -427 6139 1260 4 1255 213 0 53 26 chrX 87877978 87878016 -78772280 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1255 27949 204 87 31 chrX 87878016 87878917 -78771379 - L1_Mus2 LINE L1 -4624 1259 305 4 1255 1026 226 75 9 chrX 87879831 87880052 -78770244 + L1_Mur3 LINE L1 5089 5325 -555 4 1255 426 39 0 0 chrX 87880052 87880104 -78770192 + (GAAAA)n Simple_repeat Simple_repeat 3 54 0 4 1255 1026 226 75 9 chrX 87880104 87880203 -78770093 + L1_Mur3 LINE L1 5326 5430 -450 4 1255 22 35 0 0 chrX 87880618 87880647 -78769649 + AT_rich Low_complexity Low_complexity 1 29 0 4 1255 32 26 0 0 chrX 87880692 87880731 -78769565 + AT_rich Low_complexity Low_complexity 1 39 0 4 1255 2428 196 60 64 chrX 87880930 87881585 -78768711 - Lx9 LINE L1 -112 7532 6881 4 1255 906 201 3 3 chrX 87881591 87881826 -78768470 - Lx9 LINE L1 -1700 5944 5675 4 1255 369 0 0 0 chrX 87881948 87881989 -78768307 + (TAAAA)n Simple_repeat Simple_repeat 3 43 0 4 1255 1945 244 59 30 chrX 87882147 87882196 -78768100 + RCHARR1 DNA MER1_type 273 319 -655 4 1255 1827 142 15 39 chrX 87882196 87882533 -78767763 - ORR1A4 LTR MaLR 0 329 1 4 1255 1945 244 59 30 chrX 87882533 87883091 -78767205 + RCHARR1 DNA MER1_type 320 898 -76 4 1255 318 309 184 15 chrX 87883281 87883623 -78766673 - L1M5 LINE L1 -1591 4555 4156 4 1255 283 89 50 0 chrX 87886204 87886262 -78764034 - Lx3C LINE L1 -77 5800 5733 4 1255 412 132 0 11 chrX 87886245 87886328 -78763968 + Lx3C LINE L1 5797 5875 -1125 4 1255 2774 126 42 7 chrX 87886328 87886775 -78763521 + Lx3C LINE L1 6505 6967 -9 4 1255 180 0 0 0 chrX 87886961 87886981 -78763315 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 1255 21 0 0 0 chrX 87886988 87887009 -78763287 + AT_rich Low_complexity Low_complexity 1 21 0 4 1255 789 247 78 34 chrX 87887066 87887465 -78762831 - RMER6B LTR ERVK -2 459 1 4 1255 42 36 0 0 chrX 87887866 87887922 -78762374 + AT_rich Low_complexity Low_complexity 1 56 0 4 1255 223 311 97 15 chrX 87887940 87888074 -78762222 - MIRb SINE MIR -51 217 73 4 1255 23 0 0 0 chrX 87889136 87889159 -78761137 + AT_rich Low_complexity Low_complexity 1 23 0 5 1255 289 372 40 0 chrX 87889214 87889362 -78760934 + RSINE1 SINE B4 4 157 -8 5 1255 347 271 36 27 chrX 87889403 87889513 -78760783 + HAL1-3A_ME LINE L1 1976 2086 -772 5 1255 21 0 0 0 chrX 87889513 87889534 -78760762 + AT_rich Low_complexity Low_complexity 1 21 0 5 1255 241 227 13 39 chrX 87889791 87889869 -78760427 + (TTTA)n Simple_repeat Simple_repeat 1 76 0 5 1255 4798 175 23 13 chrX 87890015 87890878 -78759418 - Lx2 LINE L1 -2 6995 6124 5 1255 289 266 114 0 chrX 87891004 87891083 -78759213 + Lx7 LINE L1 7220 7307 -389 5 1255 24 53 0 0 chrX 87891215 87891253 -78759043 + AT_rich Low_complexity Low_complexity 1 38 0 5 1255 384 22 0 0 chrX 87891522 87891567 -78758729 + (TTA)n Simple_repeat Simple_repeat 1 45 0 5 1255 27 29 0 0 chrX 87892182 87892216 -78758080 + AT_rich Low_complexity Low_complexity 1 34 0 5 1255 26 0 0 0 chrX 87892448 87892474 -78757822 + AT_rich Low_complexity Low_complexity 1 26 0 5 1255 6209 78 8 1 chrX 87892521 87893398 -78756898 - L1_Mm LINE L1 -3389 2494 1612 5 1255 29353 27 5 0 chrX 87893397 87896913 -78753383 + L1Md_A LINE L1 2052 5585 -298 5 1255 8209 42 1 1 chrX 87896914 87897910 -78752386 + L1Md_A LINE L1 5587 6582 0 5 1255 18270 70 1 0 chrX 87897910 87900752 -78749544 + L1Md_F2 LINE L1 3449 6292 -290 5 1255 8334 37 0 0 chrX 87900752 87901727 -78748569 + IAPLTR3-int LTR ERVK 500 1474 -5347 5 1255 13271 19 0 3 chrX 87901723 87903225 -78747071 + IAPLTR3-int LTR ERVK 5304 6801 -20 5 1255 2701 31 22 0 chrX 87903225 87903544 -78746752 + IAPLTR3 LTR ERVK 1 326 0 5 1255 2616 115 11 39 chrX 87903544 87903618 -78746678 - L1_Mus4 LINE L1 -84 6552 6484 5 1255 2880 46 0 0 chrX 87903618 87903964 -78746332 - ORR1A0 LTR MaLR 0 346 1 5 1255 2616 115 11 39 chrX 87903964 87904219 -78746077 - L1_Mus4 LINE L1 -153 6483 6234 5 1255 2814 55 10 81 chrX 87904219 87904637 -78745659 - RLTR10 LTR ERVK -2 388 1 5 1255 2616 115 11 39 chrX 87904637 87904740 -78745556 - L1_Mus4 LINE L1 -403 6233 6131 5 1255 2005 95 76 0 chrX 87904738 87905053 -78745243 + L1_Mus4 LINE L1 5595 5933 -703 5 1255 23 33 0 0 chrX 87905184 87905214 -78745082 + AT_rich Low_complexity Low_complexity 1 30 0 5 1255 23 33 0 0 chrX 87905356 87905386 -78744910 + AT_rich Low_complexity Low_complexity 1 30 0 5 1255 288 0 0 0 chrX 87905774 87905806 -78744490 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1255 31 82 0 0 chrX 87905871 87905944 -78744352 + AT_rich Low_complexity Low_complexity 1 73 0 5 1255 2483 249 75 54 chrX 87906983 87907496 -78742800 + L1_Rod LINE L1 520 1070 -6538 5 1255 1896 167 45 0 chrX 87907496 87907831 -78742465 + Lx2B LINE L1 6650 6999 -1 5 1255 2483 249 75 54 chrX 87907831 87907971 -78742325 + L1_Rod LINE L1 1071 1188 -6420 5 1255 243 0 0 0 chrX 87907971 87907998 -78742298 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1255 2483 220 31 43 chrX 87907998 87908235 -78742061 + L1_Rod LINE L1 1189 1371 -4476 5 1255 289 279 18 0 chrX 87908270 87908381 -78741915 + L1M2 LINE L1 2770 2882 -3261 5 1255 875 270 5 5 chrX 87908479 87908695 -78741601 - B3 SINE B2 0 216 1 5 1255 186 236 0 0 chrX 87908741 87908796 -78741500 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 1255 304 226 0 0 chrX 87908801 87908863 -78741433 - Lx9 LINE L1 -646 6998 6937 5 1255 1017 90 0 0 chrX 87908863 87908996 -78741300 + B1_Mus1 SINE Alu 1 133 -15 5 1255 636 180 0 0 chrX 87909026 87909148 -78741148 + GA-rich Low_complexity Low_complexity 3 124 0 5 1255 833 296 37 7 chrX 87909230 87909499 -78740797 + Lx9 LINE L1 7069 7345 -299 5 1255 1910 167 23 12 chrX 87909499 87909844 -78740452 + Lx3C LINE L1 6620 6968 -8 5 1255 252 287 5 94 chrX 87909864 87909998 -78740298 + L1_Mur3 LINE L1 5475 5596 -582 5 1255 2219 192 62 17 chrX 87910054 87910520 -78739776 - RMER19B LTR ERVK -12 890 404 5 1255 40848 12 1 6 chrX 87910538 87917303 -78732993 - L1Md_A LINE L1 0 6582 1 5 1255 1857 204 34 111 chrX 87917303 87917799 -78732497 - RMER19B LTR ERVK -443 459 2 5 1255 610 227 0 0 chrX 87917801 87917911 -78732385 - B1_Mur2 SINE Alu -27 122 13 5 1255 230 116 0 23 chrX 87917984 87918028 -78732268 + (GAA)n Simple_repeat Simple_repeat 2 44 0 5 1255 356 257 124 46 chrX 87918037 87918304 -78731992 + L1MB3 LINE L1 5696 5981 -208 5 1255 207 0 0 0 chrX 87919647 87919670 -78730626 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 5 1255 290 143 83 0 chrX 87919670 87919754 -78730542 - Lx3_Mus LINE L1 -20 6989 6899 5 1255 2475 202 40 46 chrX 87920621 87921165 -78729131 - RLTR20A LTR ERVK 0 541 1 5 1255 4717 238 74 53 chrX 87921171 87922160 -78728136 - MYSERV16_I-int LTR ERVK -6 2320 1233 5 1255 292 255 117 56 chrX 87922160 87922322 -78727974 + L1MD LINE L1 3459 3630 -2516 5 1255 4717 238 74 53 chrX 87922322 87923394 -78726902 - MYSERV16_I-int LTR ERVK -6 1232 52 5 1255 410 102 0 0 chrX 87923396 87923455 -78726841 - Lx LINE L1 -875 5779 5721 5 1255 600 261 32 32 chrX 87923451 87923641 -78726655 + Lx7 LINE L1 7507 7696 0 5 1255 205 244 0 0 chrX 87923653 87923698 -78726598 + GA-rich Low_complexity Low_complexity 2 46 0 5 1255 396 0 0 0 chrX 87923701 87923745 -78726551 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1255 288 0 0 0 chrX 87924689 87924721 -78725575 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1255 1153 292 118 38 chrX 87924730 87925592 -78724704 + Charlie1a DNA MER1_type 261 1191 -264 5 1255 2497 126 26 3 chrX 87925694 87926085 -78724211 - MTB LTR MaLR 0 400 1 5 1255 1194 196 17 4 chrX 87926212 87926485 -78723811 + L1VL4 LINE L1 521 797 -5538 5 1255 5836 142 12 7 chrX 87926477 87927494 -78722802 + MusHAL1 LINE L1 855 1876 -836 5 1255 6151 151 22 8 chrX 87927491 87928646 -78721650 + L1_Mus4 LINE L1 5465 6636 0 5 1255 7750 177 31 56 chrX 87928812 87930711 -78719585 + L1_Mur2 LINE L1 3035 4886 -991 5 1255 5156 73 3 6 chrX 87930709 87931387 -78718909 - L1Md_F2 LINE L1 -10 5873 5198 5 1255 4721 100 8 1 chrX 87931387 87932058 -78718238 + L1Md_F2 LINE L1 5898 6572 -10 5 1255 29942 176 24 43 chrX 87932076 87933614 -78716682 + L1Md_F2 LINE L1 451 1961 -3922 5 1255 216 67 0 0 chrX 87933614 87933644 -78716652 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 5 1255 29942 92 9 13 chrX 87933644 87937276 -78713020 + L1Md_F2 LINE L1 1962 5586 -297 5 1255 7237 90 2 5 chrX 87937277 87938274 -78712022 + L1Md_F2 LINE L1 5588 6581 -1 5 1255 8077 177 12 9 chrX 87938289 87940405 -78709891 + Lx2B LINE L1 4875 7000 0 5 1255 1160 62 14 0 chrX 87940412 87940557 -78709739 + B1_Mm SINE Alu 1 147 0 5 1255 191 32 65 0 chrX 87940557 87940588 -78709708 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 5 1255 37 23 0 0 chrX 87940588 87940632 -78709664 + AT_rich Low_complexity Low_complexity 1 44 0 5 1255 371 350 58 0 chrX 87941811 87941931 -78708365 - RSINE1 SINE B4 -34 131 5 5 1255 379 241 23 33 chrX 87942457 87942587 -78707709 + B3A SINE B2 1 137 -58 5 1255 279 0 0 0 chrX 87942587 87942618 -78707678 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1255 359 288 50 71 chrX 87942618 87942685 -78707611 + B2_Mm2 SINE B2 138 194 -1 5 1255 1602 279 16 31 chrX 87942885 87943310 -78706986 - MTD LTR MaLR 0 419 1 5 1255 270 81 0 0 chrX 87943380 87943417 -78706879 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 5 1255 678 109 0 0 chrX 87944320 87944421 -78705875 + (TA)n Simple_repeat Simple_repeat 1 101 0 5 1255 24 67 0 0 chrX 87944607 87944652 -78705644 + AT_rich Low_complexity Low_complexity 1 45 0 5 1255 180 0 0 0 chrX 87944751 87944771 -78705525 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 1255 311 65 22 0 chrX 87944884 87944930 -78705366 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1255 27 0 0 0 chrX 87945572 87945599 -78704697 + AT_rich Low_complexity Low_complexity 1 27 0 5 1255 1061 91 7 0 chrX 87946106 87946249 -78704047 - L1_Mus2 LINE L1 -398 6168 6025 5 1255 2868 78 8 3 chrX 87946249 87946637 -78703659 + L1_Mus2 LINE L1 6176 6565 -1 5 1255 572 67 11 0 chrX 87947828 87947918 -78702378 - L1Md_F2 LINE L1 -18 6564 6474 5 1255 240 214 0 18 chrX 87947979 87948036 -78702260 + CT-rich Low_complexity Low_complexity 1 56 0 5 1255 1265 81 5 5 chrX 87948782 87949008 -78701288 + (GGAA)n Simple_repeat Simple_repeat 1 226 0 5 1255 21 0 0 0 chrX 87949081 87949102 -78701194 + AT_rich Low_complexity Low_complexity 1 21 0 5 1256 1455 328 22 24 chrX 87949341 87949875 -78700421 - Lx5 LINE L1 -70 6980 6448 5 1256 7919 39 0 2 chrX 87949863 87950836 -78699460 + L1Md_A LINE L1 4188 5158 -725 5 1256 33415 42 1 0 chrX 87950834 87954986 -78695310 + L1Md_T LINE L1 1433 5586 -297 5 1256 8357 33 0 7 chrX 87954987 87955988 -78694308 + L1Md_T LINE L1 5588 6581 -1 5 1256 6124 41 0 0 chrX 87956035 87957128 -78693168 + L1Md_A LINE L1 5146 6238 -344 5 1256 4410 12 2 0 chrX 87957128 87957620 -78692676 - MT2_Mm LTR ERVL 0 493 1 5 1256 314 0 0 0 chrX 87957620 87957658 -78692638 - MERVL-int LTR ERVL 0 5485 5448 5 1256 392 167 46 35 chrX 87957658 87957745 -78692551 - ORR1A3-int LTR MaLR -1323 640 553 5 1256 34539 39 2 1 chrX 87957745 87962254 -78688042 - MERVL-int LTR ERVL -125 5360 834 5 1256 6394 11 0 0 chrX 87962262 87962976 -78687320 - MERVL-int LTR ERVL -4771 714 1 5 1256 4410 12 2 0 chrX 87962976 87963468 -78686828 - MT2_Mm LTR ERVL 0 493 1 5 1256 2697 51 0 6 chrX 87963468 87963806 -78686490 + L1Md_F3 LINE L1 6234 6569 -15 5 1256 406 77 54 21 chrX 87963889 87963982 -78686314 + T-rich Low_complexity Low_complexity 4 99 0 5 1256 433 257 31 111 chrX 87963982 87964144 -78686152 - Lx5 LINE L1 -610 6440 6322 5 1256 2878 216 32 12 chrX 87964151 87965166 -78685130 + Lx5 LINE L1 5253 6307 -743 5 1256 21 0 0 0 chrX 87965427 87965448 -78684848 + AT_rich Low_complexity Low_complexity 1 21 0 5 1256 1096 97 0 0 chrX 87965632 87965776 -78684520 - B1_Mus1 SINE Alu 0 148 5 5 1256 331 281 123 64 chrX 87966146 87966317 -78683979 - L1MEg LINE L1 -5652 432 252 5 1256 432 37 0 0 chrX 87966791 87966845 -78683451 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 1256 5433 174 64 8 chrX 87967974 87969028 -78681268 + L1_Mur1 LINE L1 1 1113 -5869 5 1256 371 229 7 109 chrX 87969022 87969167 -78681129 + L1_Mur1 LINE L1 430 520 -6464 5 1256 19078 109 20 106 chrX 87969181 87971319 -78678977 + L1_Mur1 LINE L1 1118 3223 -2663 5 1256 417 185 42 92 chrX 87971319 87971438 -78678858 + MT2B LTR ERVL 152 264 -337 5 1256 1023 44 15 0 chrX 87971335 87971471 -78678825 + B1_Mus2 SINE Alu 9 146 -1 5 1256 19078 109 20 106 chrX 87971471 87971665 -78678631 + L1_Mur1 LINE L1 3224 3416 -2470 5 1256 1058 90 14 0 chrX 87971665 87971809 -78678487 + B1_Mus1 SINE Alu 1 146 -2 5 1256 19078 110 21 116 chrX 87971809 87973362 -78676934 + L1_Mur1 LINE L1 3417 4777 -1109 5 1256 244 366 14 0 chrX 87973362 87973433 -78676863 + B1F SINE Alu 47 118 -31 5 1256 3073 53 5 10 chrX 87974270 87974668 -78675628 - MTA_Mm LTR MaLR 0 396 1 5 1256 604 289 64 29 chrX 87975353 87975524 -78674772 - B3 SINE B2 -30 186 10 5 1256 762 213 149 0 chrX 87975917 87976105 -78674191 + B3 SINE B2 1 216 0 5 1256 463 336 91 19 chrX 87976148 87976412 -78673884 - Charlie1b DNA MER1_type -236 287 5 5 1256 432 253 156 17 chrX 87976695 87976868 -78673428 - B3A SINE B2 0 198 2 6 1256 233 118 20 0 chrX 87977069 87977120 -78673176 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 1256 221 170 0 36 chrX 87977198 87977253 -78673043 + GA-rich Low_complexity Low_complexity 2 54 0 6 1256 353 295 0 0 chrX 87977383 87977461 -78672835 - ID4_ SINE ID -4 79 2 6 1256 201 74 0 0 chrX 87977783 87977810 -78672486 + (CATA)n Simple_repeat Simple_repeat 2 28 0 6 1256 1179 61 0 0 chrX 87978548 87978695 -78671601 - B1_Mus1 SINE Alu 0 148 2 6 1256 242 42 18 143 chrX 87978856 87978912 -78671384 - RCHARR1 DNA MER1_type -183 791 743 6 1256 4220 81 0 0 chrX 87978965 87979523 -78670773 - L1Md_T LINE L1 0 6582 6025 6 1256 3756 119 15 27 chrX 87979523 87980120 -78670176 - Lx LINE L1 -27 6627 6038 6 1256 183 129 0 0 chrX 87980679 87980710 -78669586 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1256 3638 153 42 2 chrX 87981092 87981472 -78668824 - Lx5 LINE L1 -946 6104 5698 6 1256 282 29 0 0 chrX 87981472 87981507 -78668789 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1256 3638 168 12 9 chrX 87981507 87982005 -78668291 - Lx5 LINE L1 -180 5697 5202 6 1256 7989 189 11 58 chrX 87982000 87982121 -78668175 - Lx5 LINE L1 -2540 3337 3275 6 1256 1064 84 28 0 chrX 87982121 87982264 -78668032 - B1_Mus1 SINE Alu -1 147 1 6 1256 7989 189 11 58 chrX 87982264 87982991 -78667305 - Lx5 LINE L1 -2603 3274 2564 6 1256 2261 90 71 0 chrX 87982991 87983314 -78666982 - ORR1A1 LTR MaLR 0 346 1 6 1256 7989 189 11 58 chrX 87983314 87983327 -78666969 - Lx5 LINE L1 -3314 2563 2552 6 1256 293 47 0 23 chrX 87983327 87983371 -78666925 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 6 1256 7989 189 11 58 chrX 87983371 87984470 -78665826 - Lx5 LINE L1 -3326 2551 1469 6 1256 3713 47 2 6 chrX 87984488 87984955 -78665341 - L1Md_F2 LINE L1 0 6582 6118 6 1256 3179 59 17 0 chrX 87984966 87985371 -78664925 + L1Md_F2 LINE L1 5756 6167 -415 6 1256 1007 250 26 4 chrX 87985368 87985880 -78664416 - Lx5 LINE L1 -4393 1484 893 6 1256 25 102 0 0 chrX 87986375 87986463 -78663833 + AT_rich Low_complexity Low_complexity 1 88 0 6 1256 258 32 0 0 chrX 87986551 87986582 -78663714 + (TTA)n Simple_repeat Simple_repeat 2 32 0 6 1256 4434 117 74 6 chrX 87986597 87987310 -78662986 - Lx3B LINE L1 -2 6971 6210 6 1256 22 35 0 0 chrX 87987679 87987708 -78662588 + AT_rich Low_complexity Low_complexity 1 29 0 6 1256 654 307 0 7 chrX 87988444 87988595 -78661701 - RSINE1 SINE B4 -13 152 3 6 1256 1179 75 0 0 chrX 87990601 87990748 -78659548 + B1_Mm SINE Alu 1 147 0 6 1256 217 367 36 18 chrX 87990785 87990896 -78659400 - L2 LINE L2 -913 2506 2394 6 1256 3434 181 37 16 chrX 87991438 87992065 -78658231 + RLTR26 LTR ERVK 3 642 0 6 1256 685 275 4 14 chrX 87992599 87992777 -78657519 - B3 SINE B2 -28 167 1 6 1256 23 0 0 0 chrX 87993522 87993545 -78656751 + AT_rich Low_complexity Low_complexity 1 23 0 6 1256 270 77 0 103 chrX 87993626 87993684 -78656612 - Lx2A LINE L1 -6 7002 6951 6 1256 823 270 44 10 chrX 87994665 87994871 -78655425 - ORR1D2 LTR MaLR -157 213 1 6 1256 25 95 0 0 chrX 87994877 87994951 -78655345 + AT_rich Low_complexity Low_complexity 1 74 0 6 1256 22 80 0 0 chrX 87994997 87995047 -78655249 + AT_rich Low_complexity Low_complexity 1 50 0 6 1256 1150 304 174 17 chrX 87995206 87995648 -78654648 + Lx8 LINE L1 6683 7235 -238 6 1256 306 0 0 0 chrX 87995648 87995682 -78654614 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 1256 1150 304 179 17 chrX 87995682 87995909 -78654387 + Lx8 LINE L1 7236 7471 -2 6 1256 830 335 117 40 chrX 87995930 87996509 -78653787 - Zaphod DNA Tip100 -3280 751 128 6 1256 228 111 0 0 chrX 87996544 87996580 -78653716 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1256 396 259 63 49 chrX 87996580 87996722 -78653574 - HAL1-3A_ME LINE L1 -740 2118 1975 6 1256 860 120 0 0 chrX 87997907 87998040 -78652256 - L1_Mus2 LINE L1 0 6566 6434 6 1256 285 109 0 0 chrX 87998046 87998092 -78652204 + (T)n Simple_repeat Simple_repeat 1 46 0 6 1256 234 0 0 0 chrX 87998210 87998236 -78652060 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1256 7839 67 9 2 chrX 87998260 87999754 -78650542 - L1Md_F2 LINE L1 -2 6580 5071 6 1256 494 337 71 40 chrX 88000123 88000376 -78649920 + MLT1D LTR MaLR 137 397 -108 1 1256 1027 312 36 54 chrX 88000394 88000896 -78649400 - Lx8 LINE L1 -780 6693 6201 2 1256 959 353 90 23 chrX 88000908 88001050 -78649246 + Lx8 LINE L1 6704 6865 -608 2 1256 3954 56 85 0 chrX 88001050 88001566 -78648730 - LTRIS2 LTR ERV1 0 564 5 3 1256 959 353 90 23 chrX 88001566 88002087 -78648209 + Lx8 LINE L1 6866 7412 -61 2 1256 1105 95 0 0 chrX 88002121 88002268 -78648028 + B1_Mus1 SINE Alu 2 148 0 4 1256 249 200 0 0 chrX 88004609 88004669 -78645627 + T-rich Low_complexity Low_complexity 1 60 0 5 1256 2819 216 95 25 chrX 88004676 88004960 -78645336 - Lx2 LINE L1 -1 6996 6680 6 1256 369 117 0 0 chrX 88004960 88005020 -78645276 + (TA)n Simple_repeat Simple_repeat 2 61 0 7 1256 2819 216 95 25 chrX 88005020 88005451 -78644845 - Lx2 LINE L1 -318 6679 6231 6 1256 2246 230 52 23 chrX 88005451 88005867 -78644429 - RMER12 LTR ERVK -116 1206 769 8 1256 432 0 0 0 chrX 88005867 88005915 -78644381 + (TGGA)n Simple_repeat Simple_repeat 1 48 0 9 1256 2246 230 52 23 chrX 88005915 88006113 -78644183 - RMER12 LTR ERVK -554 768 574 8 1256 1171 79 0 7 chrX 88006113 88006266 -78644030 + L1Md_F2 LINE L1 189 340 -6276 1 1256 2686 120 31 0 chrX 88006272 88006664 -78643632 + L1_Mus4 LINE L1 6068 6471 -165 1 1256 31146 73 5 2 chrX 88006639 88008024 -78642272 + L1Md_F2 LINE L1 582 1973 -3910 1 1256 243 0 0 0 chrX 88008024 88008051 -78642245 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1256 31146 88 2 0 chrX 88008051 88011661 -78638635 + L1Md_F2 LINE L1 1974 5585 -298 1 1256 7465 71 1 9 chrX 88011662 88012665 -78637631 + L1Md_F2 LINE L1 5588 6582 0 1 1256 1246 268 67 78 chrX 88013222 88013733 -78636563 - RLTR40 LTR ERVK -254 563 59 1 1256 413 287 0 0 chrX 88014131 88014232 -78636064 - Lx8 LINE L1 -326 7147 7047 1 1256 2206 186 0 0 chrX 88014768 88015172 -78635124 - Lx LINE L1 0 6654 6251 1 1256 24 53 0 0 chrX 88015292 88015330 -78634966 + AT_rich Low_complexity Low_complexity 1 38 0 1 1256 1763 166 44 3 chrX 88015580 88015900 -78634396 + Lx3A LINE L1 6636 6968 -13 1 1256 396 0 0 0 chrX 88015900 88015944 -78634352 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1 1256 769 286 70 40 chrX 88015974 88016530 -78633766 + L1_Rod LINE L1 1335 1881 -3966 1 1256 7944 102 32 2 chrX 88016541 88017745 -78632551 + Lx3_Mus LINE L1 5771 7009 0 2 1256 2680 256 37 18 chrX 88017829 88018500 -78631796 + Lx6 LINE L1 6166 6849 -611 2 1256 1357 263 127 2 chrX 88018496 88018889 -78631407 + Lx6 LINE L1 7017 7458 -2 2 1256 354 254 24 8 chrX 88018913 88019036 -78631260 + (TA)n Simple_repeat Simple_repeat 1 125 0 2 1256 22 35 0 0 chrX 88019300 88019329 -78630967 + AT_rich Low_complexity Low_complexity 1 29 0 2 1256 21 0 0 0 chrX 88019432 88019453 -78630843 + AT_rich Low_complexity Low_complexity 1 21 0 2 1256 1079 108 0 12 chrX 88019835 88020004 -78630292 + Lx LINE L1 6480 6646 -8 2 1256 9984 37 3 4 chrX 88020474 88022602 -78627694 + L1Md_Gf LINE L1 1 1612 -4274 2 1256 782 312 74 74 chrX 88022879 88023256 -78627040 + MTE2a LTR MaLR 1 377 -2 2 1256 314 115 0 0 chrX 88023376 88023432 -78626864 - L1_Mur3 LINE L1 -1001 5443 5354 2 1256 1304 128 50 21 chrX 88023432 88023671 -78626625 - L1_Mus3 LINE L1 0 6638 6393 2 1256 4941 103 10 11 chrX 88023671 88024388 -78625908 + Lx3_Mus LINE L1 6294 7009 0 3 1256 324 0 0 0 chrX 88024393 88024429 -78625867 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1256 384 360 0 27 chrX 88024501 88024635 -78625661 + MTE2b LTR MaLR 45 173 -206 3 1256 237 339 8 62 chrX 88024521 88024650 -78625646 + MT2A LTR ERVL 63 184 -349 3 1256 255 342 0 81 chrX 88024958 88025082 -78625214 + RLTR8 LTR ERVK 252 365 0 3 1256 357 312 118 61 chrX 88025082 88025276 -78625020 + MTE2b LTR MaLR 200 405 -14 3 1256 288 299 0 25 chrX 88025444 88025523 -78624773 + ID4_ SINE ID 2 78 -5 3 1256 201 196 0 0 chrX 88025652 88025698 -78624598 + GA-rich Low_complexity Low_complexity 2 47 0 3 1256 17636 167 20 7 chrX 88026059 88030348 -78619948 + L1_Mus4 LINE L1 2281 6631 -5 3 1256 279 295 54 0 chrX 88030623 88030752 -78619544 + L1M2 LINE L1 5703 5838 -462 3 1256 273 382 29 0 chrX 88030795 88030897 -78619399 - PB1D10 SINE Alu -10 107 3 3 1256 532 365 41 58 chrX 88030984 88031447 -78618849 - MLT1D LTR MaLR -25 480 26 4 1256 390 259 7 14 chrX 88031552 88031693 -78618603 + (TA)n Simple_repeat Simple_repeat 2 141 0 4 1256 4981 168 20 26 chrX 88032613 88034127 -78616169 + L1VL2 LINE L1 445 1948 -1667 4 1256 3056 191 11 9 chrX 88034117 88034750 -78615546 + L1_Mur1 LINE L1 4923 5556 -330 4 1256 2592 48 10 76 chrX 88035167 88035575 -78614721 - RLTR10 LTR ERVK -9 381 1 4 1256 346 346 29 0 chrX 88035575 88035685 -78614611 - B1F SINE Alu -24 125 12 4 1256 2816 219 26 19 chrX 88036211 88036785 -78613511 - Lx6 LINE L1 -698 6762 6185 4 1256 713 115 130 8 chrX 88036781 88036912 -78613384 + L1_Mur3 LINE L1 4441 4587 -1293 4 1256 31 88 0 0 chrX 88036912 88036992 -78613304 + AT_rich Low_complexity Low_complexity 1 80 0 4 1256 245 178 0 171 chrX 88036997 88037085 -78613211 + L1_Mur3 LINE L1 4594 4666 -1214 4 1256 3823 194 47 155 chrX 88037089 88037523 -78612773 - L1_Mur3 LINE L1 -3349 2531 2069 4 1256 351 0 0 0 chrX 88037523 88037562 -78612734 + (TATG)n Simple_repeat Simple_repeat 4 42 0 5 1256 3823 216 40 95 chrX 88037562 88039465 -78610831 - L1_Mur3 LINE L1 -3812 2068 279 4 1256 604 352 23 0 chrX 88039494 88039670 -78610626 - B3 SINE B2 -6 210 31 5 1256 320 127 32 0 chrX 88039725 88039788 -78610508 - Lx6 LINE L1 -11 7449 7385 5 1256 362 21 21 0 chrX 88040173 88040220 -78610076 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1256 540 0 0 0 chrX 88040240 88040300 -78609996 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 1256 276 212 45 0 chrX 88040301 88040367 -78609929 + Lx6 LINE L1 3165 3233 -2644 5 1256 1842 198 113 72 chrX 88040450 88040727 -78609569 - RMER6C LTR ERVK -2 688 416 5 1256 182 91 30 0 chrX 88040727 88040760 -78609536 + (CACTG)n Simple_repeat Simple_repeat 2 35 0 5 1256 1842 196 352 63 chrX 88040760 88041069 -78609227 - RMER6C LTR ERVK -275 415 1 5 1256 1544 225 36 7 chrX 88041069 88041480 -78608816 + Lx6 LINE L1 3356 3778 -2099 5 1256 636 123 9 28 chrX 88041478 88041587 -78608709 - L1_Mur3 LINE L1 -1263 4617 4511 5 1256 4843 204 92 14 chrX 88041584 88041616 -78608680 + Lx6 LINE L1 4590 4621 -1256 5 1256 288 53 0 0 chrX 88041616 88041654 -78608642 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 5 1256 4843 204 92 14 chrX 88041654 88042750 -78607546 + Lx6 LINE L1 4622 5805 -72 5 1256 1100 117 0 24 chrX 88042750 88042916 -78607380 + B2_Mm2 SINE B2 2 163 -32 6 1256 1338 261 25 55 chrX 88042917 88043365 -78606931 + Lx6 LINE L1 5800 6283 -775 5 1256 782 175 19 222 chrX 88043366 88043623 -78606673 + RMER6B LTR ERVK 1 205 -256 6 1256 1737 180 196 8 chrX 88044005 88044397 -78605899 - RMER4A LTR ERVK 0 466 1 6 1256 30956 82 6 14 chrX 88044941 88050022 -78600274 - L1Md_F2 LINE L1 -1 6581 1546 6 1256 360 94 0 0 chrX 88050478 88050531 -78599765 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1256 566 292 22 0 chrX 88050538 88050675 -78599621 - RSINE1 SINE B4 -8 157 18 6 1256 401 297 62 58 chrX 88050842 88051013 -78599283 + L1M4 LINE L1 4810 4993 -1153 6 1256 720 212 206 6 chrX 88051013 88051193 -78599103 + B3 SINE B2 1 216 0 6 1256 401 297 62 58 chrX 88051193 88051296 -78599000 + L1M4 LINE L1 4994 5085 -1061 6 1256 626 215 29 169 chrX 88051315 88051398 -78598898 - B3 SINE B2 0 216 168 6 1256 423 38 0 0 chrX 88051398 88051451 -78598845 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1256 626 231 28 155 chrX 88051451 88051601 -78598695 - B3 SINE B2 -49 167 11 6 1256 262 271 12 0 chrX 88051628 88051713 -78598583 - Lx9 LINE L1 -7 7637 7552 7 1256 7786 36 6 3 chrX 88051711 88052657 -78597639 - L1Md_F3 LINE L1 0 6584 5636 7 1256 5468 120 20 4 chrX 88052657 88053822 -78596474 - L1Md_F LINE L1 -4348 1535 322 7 1256 317 234 58 90 chrX 88054827 88054982 -78595314 + RNLTR23 LTR ERVK 476 625 -17 7 1256 47 19 0 0 chrX 88057640 88057694 -78592602 + AT_rich Low_complexity Low_complexity 1 54 0 7 1256 258 273 45 0 chrX 88058985 88059051 -78591245 + MT2B2 LTR ERVL 176 244 -340 7 1256 233 294 172 11 chrX 88059051 88059076 -78591220 + PB1D10 SINE Alu 12 117 0 7 1256 387 316 65 19 chrX 88059089 88059244 -78591052 + RSINE1 SINE B4 3 164 -1 7 1256 3509 236 78 41 chrX 88060553 88061501 -78588795 + Lx7 LINE L1 6385 7367 -329 7 1256 1633 81 8 52 chrX 88061545 88061794 -78588502 - L1_Mus3 LINE L1 -7 6631 6394 7 1256 212 29 86 0 chrX 88061819 88061854 -78588442 + (CAAAAA)n Simple_repeat Simple_repeat 3 40 0 8 1256 565 276 61 43 chrX 88061855 88061986 -78588310 + Lx7 LINE L1 7364 7500 -196 7 1256 486 46 0 0 chrX 88061986 88062051 -78588245 + (TG)n Simple_repeat Simple_repeat 2 66 0 8 1256 565 276 61 43 chrX 88062051 88062245 -78588051 + Lx7 LINE L1 7501 7695 -1 7 1256 21 36 0 0 chrX 88062999 88063027 -78587269 + AT_rich Low_complexity Low_complexity 1 28 0 8 1256 25 51 0 0 chrX 88063770 88063809 -78586487 + AT_rich Low_complexity Low_complexity 1 39 0 8 1256 532 233 175 6 chrX 88063998 88064158 -78586138 - B3 SINE B2 -3 213 27 8 1256 3384 129 19 21 chrX 88064160 88064547 -78585749 - L1_Mm LINE L1 -855 5028 4642 8 1256 242 29 0 28 chrX 88064547 88064583 -78585713 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 8 1256 3384 129 19 21 chrX 88064583 88064623 -78585673 - L1_Mm LINE L1 -1242 4641 4601 8 1256 3113 83 0 0 chrX 88064623 88065031 -78585265 - L1_Mus1 LINE L1 -1 6566 6159 8 1256 3384 129 19 21 chrX 88065031 88065171 -78585125 - L1_Mm LINE L1 -1283 4600 4463 8 1256 544 177 2 19 chrX 88065171 88065317 -78584979 - MTB_Mm LTR MaLR -169 227 86 8 1256 461 151 0 95 chrX 88065311 88065406 -78584890 - RMER6B LTR ERVK -375 86 1 8 1256 14369 71 62 0 chrX 88065575 88067553 -78582743 + L1Md_F2 LINE L1 3486 5586 -297 9 1256 7815 58 8 0 chrX 88067554 88068541 -78581755 + L1Md_F2 LINE L1 5588 6582 0 9 1256 350 243 122 8 chrX 88068700 88068847 -78581449 + Lx3C LINE L1 6830 7000 0 9 1256 398 58 7 0 chrX 88069704 88069774 -78580522 - RMER6C LTR ERVK -484 236 165 9 1256 1692 243 77 41 chrX 88069790 88070300 -78579996 + RMER1C Other Other 815 1342 0 9 1256 1102 96 0 0 chrX 88070332 88070478 -78579818 + B1_Mus1 SINE Alu 3 148 0 9 1256 234 180 0 0 chrX 88070478 88070539 -78579757 + A-rich Low_complexity Low_complexity 1 61 0 9 1256 465 133 0 0 chrX 88070616 88070691 -78579605 + (TG)n Simple_repeat Simple_repeat 2 76 0 9 1256 396 119 128 21 chrX 88070788 88070882 -78579414 + Lx9 LINE L1 7540 7643 -1 9 1256 1132 68 7 0 chrX 88070883 88071030 -78579266 + B1_Mus1 SINE Alu 1 148 0 9 1256 223 26 0 71 chrX 88071037 88071079 -78579217 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 9 1256 269 108 0 0 chrX 88071251 88071288 -78579008 + L1_Mus2 LINE L1 6422 6458 -108 1 1256 465 71 0 0 chrX 88071352 88071422 -78578874 + (GA)n Simple_repeat Simple_repeat 1 70 0 1 1256 657 276 20 0 chrX 88071437 88071589 -78578707 - MTEb LTR MaLR -221 158 4 1 1256 255 61 0 0 chrX 88071655 88071688 -78578608 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 1 1256 309 184 23 18 chrX 88071699 88071792 -78578504 - B2_Mm2 SINE B2 -102 114 17 1 1256 615 108 11 0 chrX 88071868 88071961 -78578335 - B2_Mm1t SINE B2 -14 179 86 1 1256 2091 230 96 21 chrX 88072253 88072888 -78577408 - Lx6 LINE L1 0 7696 6754 1 1256 21 0 0 0 chrX 88072949 88072970 -78577326 + AT_rich Low_complexity Low_complexity 1 21 0 1 1256 328 292 35 28 chrX 88073779 88073920 -78576376 - MLT2C1 LTR ERVL -254 143 2 1 1256 605 237 48 80 chrX 88074582 88074770 -78575526 + B3A SINE B2 2 183 -15 1 1256 252 86 0 0 chrX 88074782 88074817 -78575479 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1256 584 149 22 33 chrX 88074833 88075013 -78575283 + (TA)n Simple_repeat Simple_repeat 2 179 0 1 1256 1327 302 12 3 chrX 88075122 88075461 -78574835 - Lx5 LINE L1 -3 7047 6706 1 1256 3813 223 40 37 chrX 88075460 88076844 -78573452 + Lx5 LINE L1 5380 6730 -328 1 1256 455 158 12 0 chrX 88076873 88076955 -78573341 - B1_Mur3 SINE Alu -9 140 58 1 1256 607 266 14 14 chrX 88077165 88077306 -78572990 + B3 SINE B2 63 203 -13 1 1256 2640 133 68 13 chrX 88078333 88078789 -78571507 + L1_Mus4 LINE L1 6149 6629 -7 1 1256 590 315 73 6 chrX 88079114 88079293 -78571003 + B3 SINE B2 25 215 -1 1 1256 219 114 0 0 chrX 88079693 88079728 -78570568 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1256 541 57 0 43 chrX 88079780 88079872 -78570424 + (CAGAGA)n Simple_repeat Simple_repeat 3 90 0 1 1256 195 42 0 0 chrX 88080120 88080144 -78570152 + (CAGGG)n Simple_repeat Simple_repeat 3 26 0 1 1257 263 370 8 32 chrX 88081269 88081290 -78569006 - ID_B1 SINE B4 0 224 105 1 1257 326 346 39 10 chrX 88081290 88081392 -78568904 - B1F SINE Alu -21 128 24 1 1257 5566 63 0 7 chrX 88081500 88082213 -78568083 + L1Md_F2 LINE L1 5859 6566 -16 1 1257 952 53 8 8 chrX 88083021 88083153 -78567143 + (TTCTC)n Simple_repeat Simple_repeat 4 135 0 1 1257 192 77 0 0 chrX 88083168 88083194 -78567102 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 1 1257 828 251 92 58 chrX 88083197 88083489 -78566807 - RMER13A LTR ERVK -529 331 30 1 1257 640 279 103 18 chrX 88083522 88083803 -78566493 + MER33 DNA MER1_type 20 324 0 1 1257 252 0 0 0 chrX 88084319 88084347 -78565949 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1257 37980 29 0 0 chrX 88084351 88091014 -78559282 - L1Md_T LINE L1 0 6585 1 1 1257 367 128 0 4 chrX 88092269 88092336 -78557960 + Lx LINE L1 5777 5841 -1217 1 1257 3717 68 0 1 chrX 88092334 88092894 -78557402 - L1_Mus1 LINE L1 -639 5928 5370 1 1257 4844 75 5 0 chrX 88092894 88093523 -78556773 + L1_Mus1 LINE L1 5935 6566 -1 1 1257 4687 119 72 8 chrX 88093540 88094318 -78555978 + Lx LINE L1 5827 6654 0 1 1257 312 27 0 0 chrX 88094469 88094506 -78555790 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1257 388 86 0 28 chrX 88094507 88094579 -78555717 + (TTG)n Simple_repeat Simple_repeat 3 72 0 1 1257 367 345 17 9 chrX 88094581 88094713 -78555583 - B1_Mur1 SINE Alu -10 139 6 1 1257 1077 140 0 0 chrX 88094806 88094984 -78555312 + (TTTCC)n Simple_repeat Simple_repeat 3 180 0 1 1257 1007 130 0 0 chrX 88094991 88095137 -78555159 - B1_Mus2 SINE Alu -1 146 1 1 1257 327 167 0 0 chrX 88095856 88095916 -78554380 - L1_Mur3 LINE L1 -630 5250 5191 1 1257 3909 239 69 9 chrX 88095912 88097497 -78552799 + Lx4B LINE L1 5271 6974 -35 1 1257 889 211 103 5 chrX 88098852 88099047 -78551249 - URR1A DNA MER1_type -7 219 6 1 1257 36709 30 1 7 chrX 88099280 88104451 -78545845 + L1Md_T LINE L1 457 5586 -297 1 1257 8363 38 0 0 chrX 88104451 88105447 -78544849 + L1Md_T LINE L1 5587 6582 0 1 1257 210 269 0 0 chrX 88105489 88105541 -78544755 + (CATATA)n Simple_repeat Simple_repeat 4 55 0 1 1257 255 391 75 0 chrX 88105541 88105674 -78544622 + MER58A DNA MER1_type 21 163 -61 1 1257 1544 43 0 0 chrX 88106303 88106488 -78543808 + B2_Mm1a SINE B2 1 185 -8 1 1257 238 264 129 23 chrX 88106915 88107047 -78543249 - L1M3 LINE L1 -653 5518 5373 1 1257 336 313 73 49 chrX 88107064 88107269 -78543027 + L1MA9 LINE L1 4481 4690 -1453 1 1257 297 0 0 0 chrX 88107277 88107310 -78542986 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1257 333 0 0 0 chrX 88107310 88107346 -78542950 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 1257 495 324 55 17 chrX 88107352 88107773 -78542523 + L1MA9 LINE L1 4770 5206 -934 1 1257 216 0 0 0 chrX 88107806 88107830 -78542466 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1257 326 297 115 0 chrX 88107845 88108027 -78542269 + L1MA9 LINE L1 5623 5825 -343 1 1257 650 227 41 61 chrX 88108034 88108231 -78542065 + B3A SINE B2 5 197 -1 1 1257 564 263 140 0 chrX 88108233 88108419 -78541877 + B3 SINE B2 5 216 0 1 1257 288 268 62 0 chrX 88108571 88108668 -78541628 + L1MA9 LINE L1 5821 5923 -389 1 1257 666 304 106 10 chrX 88108822 88109114 -78541182 + MLT1A0 LTR MaLR 31 350 -15 1 1257 316 271 14 110 chrX 88109410 88109555 -78540741 + MT2B LTR ERVL 152 282 -319 1 1257 789 186 0 15 chrX 88109428 88109564 -78540732 + B1_Mm SINE Alu 6 139 -8 1 1257 7389 83 12 1 chrX 88109619 88110680 -78539616 - L1_Mus1 LINE L1 0 6567 5495 1 1257 1125 75 0 7 chrX 88110943 88111090 -78539206 + B1_Mus2 SINE Alu 2 147 0 1 1257 409 339 65 58 chrX 88111250 88111632 -78538664 - L1MC4 LINE L1 -396 7646 7262 1 1257 23 54 0 0 chrX 88111745 88111782 -78538514 + AT_rich Low_complexity Low_complexity 1 37 0 1 1257 407 340 0 0 chrX 88112378 88112484 -78537812 - PB1D10 SINE Alu -6 111 6 1 1257 5452 37 0 0 chrX 88113934 88114578 -78535718 + L1Md_F3 LINE L1 5908 6551 -33 1 1257 486 0 0 0 chrX 88114578 88114632 -78535664 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 1257 8160 149 106 17 chrX 88114687 88116332 -78533964 - RLTR22_Mus LTR ERVK -12 1796 5 1 1257 468 0 0 0 chrX 88116390 88116442 -78533854 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1257 4505 249 55 98 chrX 88116482 88116895 -78533401 + L1_Mur3 LINE L1 2920 3226 -2654 1 1257 213 39 0 0 chrX 88116895 88116921 -78533375 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1257 4505 233 61 60 chrX 88116921 88117910 -78532386 + L1_Mur3 LINE L1 3227 4261 -1619 1 1257 3694 39 0 0 chrX 88117910 88118351 -78531945 + L1Md_T LINE L1 6142 6582 0 1 1257 4505 233 61 60 chrX 88118351 88118871 -78531425 + L1_Mur3 LINE L1 4262 4745 -1135 1 1257 973 248 27 60 chrX 88118877 88119246 -78531050 + L1_Mur3 LINE L1 4605 4961 -919 1 1257 8799 98 5 20 chrX 88119271 88121291 -78529005 + L1_Mus2 LINE L1 4577 6562 -4 1 1257 31 44 0 0 chrX 88121296 88121341 -78528955 + AT_rich Low_complexity Low_complexity 1 45 0 1 1257 774 0 0 0 chrX 88121358 88121444 -78528852 + (GAA)n Simple_repeat Simple_repeat 2 87 0 1 1257 23 0 0 0 chrX 88122230 88122253 -78528043 + AT_rich Low_complexity Low_complexity 1 23 0 1 1257 431 276 0 0 chrX 88122442 88122547 -78527749 + L1MD1 LINE L1 6123 6227 -15 1 1257 625 150 0 0 chrX 88122681 88122781 -78527515 + URR1B DNA MER1_type 125 224 -1 1 1257 510 240 18 112 chrX 88122871 88123040 -78527256 + RSINE1 SINE B4 13 165 0 1 1257 259 288 0 0 chrX 88123040 88123106 -78527190 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 1257 905 121 7 0 chrX 88123819 88123959 -78526337 + B1_Mus2 SINE Alu 1 141 -6 1 1257 343 241 41 41 chrX 88124551 88124698 -78525598 + CT-rich Low_complexity Low_complexity 2 148 0 1 1257 429 319 21 18 chrX 88124730 88124946 -78525350 + CT-rich Low_complexity Low_complexity 1 216 0 1 1257 329 292 42 109 chrX 88125095 88125260 -78525036 - HAL1-3A_ME LINE L1 -421 2437 2284 1 1257 431 302 0 56 chrX 88125266 88125572 -78524724 + CT-rich Low_complexity Low_complexity 1 288 0 1 1257 398 321 17 39 chrX 88125662 88126375 -78523921 + CT-rich Low_complexity Low_complexity 1 697 0 1 1257 19362 167 26 20 chrX 88126515 88131041 -78519255 - Lx LINE L1 -13 6641 2092 1 1257 495 177 29 3 chrX 88131053 88131169 -78519127 - L1VL4 LINE L1 -6205 97 17 1 1257 385 305 25 19 chrX 88131176 88131333 -78518963 + CT-rich Low_complexity Low_complexity 1 158 0 1 1257 255 331 30 12 chrX 88131404 88131572 -78518724 + CT-rich Low_complexity Low_complexity 2 172 0 1 1257 346 184 293 10 chrX 88131826 88131925 -78518371 - HAL1-3A_ME LINE L1 -664 2194 2068 1 1257 221 225 0 0 chrX 88131976 88132016 -78518280 + polypyrimidine Low_complexity Low_complexity 4 43 0 1 1257 252 0 0 0 chrX 88132240 88132268 -78518028 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1 1257 7226 185 16 54 chrX 88132407 88135018 -78515278 - Lx2B LINE L1 -89 6911 4404 1 1257 2409 158 11 36 chrX 88135109 88135555 -78514741 - Lx4A LINE L1 -1 7057 6623 1 1257 255 61 0 0 chrX 88135633 88135666 -78514630 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1257 285 320 30 0 chrX 88136737 88136837 -78513459 - B1F SINE Alu -2 147 45 1 1257 547 272 44 0 chrX 88138720 88138856 -78511440 - ID_B1 SINE B4 -2 222 81 1 1257 1443 201 39 15 chrX 88138955 88139288 -78511008 - Lx7 LINE L1 0 7696 7356 1 1257 197 59 59 0 chrX 88139306 88139340 -78510956 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1 1257 801 223 29 0 chrX 88139354 88139529 -78510767 - Lx7 LINE L1 -329 7367 7188 1 1257 232 209 29 108 chrX 88139790 88139892 -78510404 - MLT1A0 LTR MaLR -8 357 264 1 1257 23 78 0 0 chrX 88140017 88140068 -78510228 + AT_rich Low_complexity Low_complexity 1 51 0 1 1257 314 323 46 75 chrX 88140290 88140535 -78509761 - L1M3 LINE L1 -962 5178 4943 1 1257 540 0 0 0 chrX 88140535 88140595 -78509701 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 1257 314 323 46 75 chrX 88140595 88140617 -78509679 - L1M3 LINE L1 -1198 4942 4925 1 1257 2690 196 27 6 chrX 88140617 88141144 -78509152 - Lx5 LINE L1 -6 7044 6507 1 1257 314 323 46 75 chrX 88141144 88141247 -78509049 - L1M3 LINE L1 -1216 4924 4819 1 1257 230 0 33 0 chrX 88141257 88141287 -78509009 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1257 1229 247 113 12 chrX 88141294 88141638 -78508658 + MTD LTR MaLR 27 405 -14 1 1257 842 271 90 7 chrX 88141694 88141995 -78508301 + L1M3 LINE L1 5312 5637 -531 1 1257 2617 59 27 0 chrX 88142002 88142339 -78507957 - ORR1A1 LTR MaLR 0 346 1 2 1257 13520 67 10 1 chrX 88142339 88144114 -78506182 - ORR1A1-int LTR MaLR 0 1792 1 2 1257 2178 88 66 6 chrX 88144118 88144437 -78505859 - ORR1A1 LTR MaLR -8 338 1 2 1257 389 271 74 9 chrX 88144463 88144571 -78505725 + RSINE1 SINE B4 1 115 -50 2 1257 249 33 0 0 chrX 88144573 88144603 -78505693 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 1257 21 0 0 0 chrX 88144625 88144646 -78505650 + AT_rich Low_complexity Low_complexity 1 21 0 2 1257 545 231 95 42 chrX 88144796 88144986 -78505310 - MTD LTR MaLR -24 395 196 2 1257 4316 146 57 4 chrX 88145005 88145726 -78504570 - Lx4A LINE L1 -3 7055 6297 2 1257 3954 122 7 3 chrX 88145726 88146326 -78503970 + Lx4A LINE L1 5651 6252 -806 2 1257 619 271 117 18 chrX 88146326 88146530 -78503766 - MTD LTR MaLR -217 202 3 2 1257 603 206 0 16 chrX 88146574 88146757 -78503539 + (TA)n Simple_repeat Simple_repeat 1 180 0 2 1257 2679 39 3 6 chrX 88146871 88147209 -78503087 - ORR1A1 LTR MaLR 0 346 10 2 1257 688 250 71 25 chrX 88147483 88147721 -78502575 - L1MC2 LINE L1 -98 6246 5998 2 1257 719 269 25 15 chrX 88148248 88148452 -78501844 + B3 SINE B2 3 208 -8 2 1257 667 185 8 16 chrX 88148835 88148961 -78501335 + B1_Mus1 SINE Alu 10 134 -14 2 1257 293 68 23 0 chrX 88149150 88149194 -78501102 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 1257 31 0 0 0 chrX 88149201 88149232 -78501064 + AT_rich Low_complexity Low_complexity 1 31 0 2 1257 1128 111 84 5 chrX 88149241 88149354 -78500942 - Lx LINE L1 -7 6647 6536 2 1257 225 0 0 0 chrX 88149354 88149379 -78500917 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 2 1257 1128 111 84 5 chrX 88149379 88149456 -78500840 - Lx LINE L1 -119 6535 6443 2 1257 470 294 31 43 chrX 88149647 88149855 -78500441 + B3A SINE B2 5 213 -3 2 1257 3592 67 20 1 chrX 88149925 88150590 -78499706 - L1_Mus3 LINE L1 -531 6035 5363 2 1257 4021 101 10 3 chrX 88150590 88151174 -78499122 + L1_Mus3 LINE L1 6051 6638 0 2 1257 3592 110 28 4 chrX 88151174 88151200 -78499096 - L1_Mus2 LINE L1 -521 5362 5333 2 1257 29 70 0 0 chrX 88151381 88151438 -78498858 + AT_rich Low_complexity Low_complexity 1 57 0 2 1257 258 206 0 0 chrX 88151511 88151574 -78498722 + (TA)n Simple_repeat Simple_repeat 1 63 0 2 1257 240 240 38 15 chrX 88151595 88151726 -78498570 + (TA)n Simple_repeat Simple_repeat 1 134 0 2 1257 510 291 6 180 chrX 88151925 88152000 -78498296 - B3 SINE B2 -4 212 130 2 1257 525 55 0 0 chrX 88152000 88152073 -78498223 + (TG)n Simple_repeat Simple_repeat 1 73 0 2 1257 510 295 74 0 chrX 88152073 88152170 -78498126 - B3 SINE B2 -66 150 54 2 1257 5282 209 16 48 chrX 88152170 88153320 -78496976 - L1_Mur3 LINE L1 -14 5866 4755 2 1257 4203 219 20 1 chrX 88153320 88154154 -78496142 - Lx5 LINE L1 -4 7046 6197 2 1257 5282 209 16 48 chrX 88154154 88154281 -78496015 - L1_Mur3 LINE L1 -1126 4754 4631 2 1257 543 153 0 0 chrX 88154298 88154396 -78495900 + (TA)n Simple_repeat Simple_repeat 1 98 0 2 1257 336 300 0 0 chrX 88155113 88155203 -78495093 + PB1D10 SINE Alu 26 115 -2 2 1257 5501 90 37 15 chrX 88155346 88155444 -78494852 - L1VL2 LINE L1 -1789 1826 1723 2 1257 3230 28 15 5 chrX 88155444 88155836 -78494460 - MTA_Mm LTR MaLR 0 396 1 2 1257 5501 104 31 8 chrX 88155836 88157303 -78492993 - L1VL2 LINE L1 -1893 1722 221 2 1257 402 179 0 0 chrX 88157302 88157380 -78492916 - L1_Mur3 LINE L1 -1234 4643 4566 2 1257 736 200 23 6 chrX 88157383 88157554 -78492742 + Lx2A1 LINE L1 6835 7008 0 2 1257 1286 269 46 54 chrX 88157659 88158032 -78492264 + ORR1D2 LTR MaLR 1 370 0 2 1257 27 0 0 0 chrX 88158209 88158236 -78492060 + AT_rich Low_complexity Low_complexity 1 27 0 2 1257 708 216 50 0 chrX 88158241 88158380 -78491916 - B1_Mur3 SINE Alu -2 147 2 2 1257 885 129 0 0 chrX 88158448 88158619 -78491677 + (GA)n Simple_repeat Simple_repeat 2 172 0 2 1257 403 329 66 13 chrX 88158644 88158795 -78491501 - RSINE1 SINE B4 -6 159 1 2 1257 42 0 0 0 chrX 88160382 88160424 -78489872 + AT_rich Low_complexity Low_complexity 1 42 0 2 1257 216 0 0 0 chrX 88161194 88161218 -78489078 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 2 1257 243 398 26 0 chrX 88161524 88161637 -78488659 - MIRb SINE MIR -78 190 75 2 1257 5249 106 29 106 chrX 88162865 88163843 -78486453 - Lx LINE L1 -3 6651 5750 2 1257 240 35 0 0 chrX 88165258 88165287 -78485009 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1257 2335 77 0 56 chrX 88165288 88165630 -78484666 + L1_Mus2 LINE L1 6244 6566 0 2 1257 356 103 0 17 chrX 88165630 88165689 -78484607 + (GAA)n Simple_repeat Simple_repeat 3 60 0 2 1257 364 324 155 11 chrX 88165720 88165907 -78484389 + B3 SINE B2 3 216 0 2 1257 461 301 40 24 chrX 88165939 88166065 -78484231 + B1_Mur1 SINE Alu 11 138 -11 2 1257 192 40 0 0 chrX 88166065 88166090 -78484206 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 2 1257 307 397 32 0 chrX 88166262 88166388 -78483908 - B1F1 SINE Alu -10 139 10 2 1257 904 333 57 12 chrX 88166529 88166936 -78483360 + Lx9 LINE L1 7004 7428 -216 2 1257 266 262 34 56 chrX 88166951 88166967 -78483329 + MTEb LTR MaLR 30 47 -332 2 1257 585 94 0 0 chrX 88166967 88167052 -78483244 + (TG)n Simple_repeat Simple_repeat 2 86 0 2 1257 266 262 34 56 chrX 88167052 88167124 -78483172 + MTEb LTR MaLR 48 116 -263 2 1257 263 291 32 75 chrX 88167220 88167313 -78482983 + MT2B2 LTR ERVL 152 240 -344 2 1257 350 253 53 32 chrX 88167235 88167331 -78482965 + PB1D10 SINE Alu 5 105 -15 2 1257 297 0 0 0 chrX 88167331 88167364 -78482932 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2 1257 180 0 0 0 chrX 88167364 88167384 -78482912 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2 1257 542 325 170 9 chrX 88167407 88167830 -78482466 + L2a LINE L2 2401 2891 -528 2 1257 234 346 110 49 chrX 88167867 88168054 -78482242 + L2a LINE L2 2970 3173 -253 2 1257 539 311 138 61 chrX 88168054 88168547 -78481749 + MT2A LTR ERVL 1 531 -2 2 1257 234 346 110 49 chrX 88168547 88168605 -78481691 + L2a LINE L2 3174 3230 -196 2 1257 22 0 0 0 chrX 88168782 88168804 -78481492 + AT_rich Low_complexity Low_complexity 1 22 0 2 1257 227 371 105 0 chrX 88170441 88170565 -78479731 + ORR1E LTR MaLR 1 137 -222 2 1257 468 48 0 0 chrX 88170817 88170880 -78479416 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1257 41 21 0 0 chrX 88172133 88172181 -78478115 + AT_rich Low_complexity Low_complexity 1 48 0 2 1257 192 152 0 0 chrX 88172534 88172567 -78477729 + GA-rich Low_complexity Low_complexity 4 36 0 2 1257 263 288 235 41 chrX 88174262 88174577 -78475719 - L1MC4 LINE L1 -427 7615 7240 2 1257 673 329 0 0 chrX 88174658 88174816 -78475480 - RSINE1 SINE B4 -5 160 3 2 1257 596 269 14 7 chrX 88175149 88175291 -78475005 + B1_Mur1 SINE Alu 6 148 -1 2 1257 273 312 53 11 chrX 88175523 88175617 -78474679 - ORR1E LTR MaLR -253 106 9 2 1257 21 36 0 0 chrX 88175945 88175973 -78474323 + AT_rich Low_complexity Low_complexity 1 28 0 2 1257 291 214 67 11 chrX 88176612 88176719 -78473577 + RLTR9A LTR ERVK 183 336 -32 2 1257 310 252 29 19 chrX 88177018 88177123 -78473173 + MurSatRep1 Unknown Unknown 623 728 -1409 2 1257 303 299 30 30 chrX 88177297 88177428 -78472868 + MMSAT4 Satellite Satellite 37 167 -1 2 1257 295 293 39 37 chrX 88177548 88177930 -78472366 + MMSAT4 Satellite Satellite 1 382 0 2 1257 1601 167 26 4 chrX 88178016 88178286 -78472010 + ORR1A2 LTR MaLR 1 276 -51 2 1257 9007 119 17 12 chrX 88179457 88180832 -78469464 - Lx3C LINE L1 -8 6968 5587 2 1257 9824 146 29 12 chrX 88180887 88183446 -78466850 + L1_Mus1 LINE L1 184 2787 -3096 2 1257 2010 216 140 58 chrX 88183446 88184268 -78466028 + RLTR13D6 LTR ERVK 1 929 0 2 1257 19805 114 14 4 chrX 88184269 88188025 -78462271 + L1_Mus1 LINE L1 2783 6567 0 2 1257 573 289 35 40 chrX 88188317 88188515 -78461781 + RMER5 LTR ERV1 13 209 -325 2 1257 555 192 50 8 chrX 88188522 88188643 -78461653 + RMER6C LTR ERVK 553 678 -12 2 1257 284 0 28 0 chrX 88188783 88188819 -78461477 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2 1257 913 51 0 0 chrX 88188819 88188936 -78461360 - B1_Mus1 SINE Alu -9 139 23 2 1257 820 248 21 21 chrX 88188936 88189175 -78461121 - Lx6 LINE L1 -1303 6157 5919 2 1257 1458 178 58 7 chrX 88189223 88189517 -78460779 + RLTR11A2 LTR ERVK 219 527 0 2 1257 1541 287 134 39 chrX 88189519 88190131 -78460165 + Lx6 LINE L1 6761 7430 -30 2 1257 21 0 0 0 chrX 88190982 88191003 -78459293 + AT_rich Low_complexity Low_complexity 1 21 0 2 1257 249 198 0 0 chrX 88191189 88191280 -78459016 + T-rich Low_complexity Low_complexity 1 91 0 2 1257 23 54 0 0 chrX 88191365 88191402 -78458894 + AT_rich Low_complexity Low_complexity 1 37 0 2 1257 4449 138 66 4 chrX 88191492 88192221 -78458075 - L1VL2 LINE L1 -5391 944 171 2 1257 896 287 67 65 chrX 88192606 88192978 -78457318 - MTE2b LTR MaLR -5 374 2 2 1257 4401 142 80 30 chrX 88193101 88193960 -78456336 - RMER17A2 LTR ERVK -4 902 1 2 1257 237 404 31 86 chrX 88194085 88194307 -78455989 + MLT1G1 LTR MaLR 85 294 -301 2 1257 441 329 40 13 chrX 88194584 88194735 -78455561 + MLT1G1 LTR MaLR 406 560 -19 2 1257 213 159 0 0 chrX 88195285 88195329 -78454967 + GA-rich Low_complexity Low_complexity 1 44 0 2 1257 2009 148 3 3 chrX 88195596 88195907 -78454389 - RLTR10E LTR ERVK 0 311 1 2 1257 18851 86 18 5 chrX 88195907 88199955 -78450341 - MMERVK10C-int LTR ERVK 0 7680 3548 2 1257 1659 85 85 0 chrX 88199947 88200182 -78450114 - MMERVK10C-int LTR ERVK -4514 3067 2813 2 1257 4128 79 27 7 chrX 88200203 88200753 -78449543 - MMERVK10C-int LTR ERVK -5136 2445 1885 2 1257 383 198 123 0 chrX 88200744 88200825 -78449471 - MMERVK10C-int LTR ERVK -5109 1028 938 2 1257 1345 172 175 23 chrX 88200828 88201250 -78449046 - MMERVK10C-int LTR ERVK -5469 668 192 2 1257 2528 147 7 7 chrX 88201240 88201659 -78448637 - MMERVK10C-int LTR ERVK -6722 859 441 2 1257 1306 131 0 10 chrX 88201752 88201960 -78448336 - MMERVK10C-int LTR ERVK -7151 430 225 2 1257 273 222 0 18 chrX 88201960 88202015 -78448281 - RLTR27 LTR ERVK -34 275 222 2 1257 592 91 34 0 chrX 88202015 88202103 -78448193 - MMERVK10C-int LTR ERVK -7488 93 3 2 1257 1884 151 23 3 chrX 88202105 88202410 -78447886 - RLTR10E LTR ERVK 0 311 1 2 1257 237 354 89 14 chrX 88202446 88202592 -78447704 + RSINE1 SINE B4 2 158 -7 2 1257 345 47 0 0 chrX 88202596 88202639 -78447657 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1257 282 123 0 0 chrX 88202639 88202696 -78447600 + (CAGAGA)n Simple_repeat Simple_repeat 3 59 0 2 1257 27977 127 23 12 chrX 88203562 88209395 -78440901 - L1_Mus1 LINE L1 -2 6565 677 2 1257 10884 66 12 2 chrX 88209618 88211093 -78439203 + RLTR22_Mus LTR ERVK 1 1490 -318 2 1257 3277 182 78 30 chrX 88211094 88211386 -78438910 + RMER17D2 LTR ERVK 2 291 -518 2 1257 438 20 0 0 chrX 88211386 88211437 -78438859 + (TC)n Simple_repeat Simple_repeat 1 51 0 2 157 3277 182 78 30 chrX 88211437 88211890 -78438406 + RMER17D2 LTR ERVK 292 783 -26 2 1258 1705 117 74 77 chrX 88211901 88212225 -78438071 + RLTR22_Mus LTR ERVK 1485 1807 -1 2 1258 216 111 0 0 chrX 88212377 88212413 -78437883 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1258 15728 72 16 5 chrX 88212508 88215334 -78434962 - L1Md_F2 LINE L1 -5 6577 3726 2 1258 402 312 7 53 chrX 88215687 88215839 -78434457 - B3A SINE B2 0 198 54 2 1258 240 299 142 49 chrX 88215898 88216186 -78434110 + Kanga2_a DNA Tc2 430 744 -144 3 1258 31 0 0 0 chrX 88216208 88216239 -78434057 + AT_rich Low_complexity Low_complexity 1 31 0 3 1258 27 37 0 36 chrX 88216474 88216503 -78433793 + AT_rich Low_complexity Low_complexity 1 28 0 3 1258 1208 54 0 0 chrX 88216503 88216650 -78433646 - B1_Mm SINE Alu 0 147 1 3 1258 27 37 0 36 chrX 88216650 88216676 -78433620 + AT_rich Low_complexity Low_complexity 1 26 0 3 1258 217 48 23 45 chrX 88217100 88217144 -78433152 + (TTTTTG)n Simple_repeat Simple_repeat 6 48 0 3 1258 189 0 0 0 chrX 88217452 88217473 -78432823 + (TA)n Simple_repeat Simple_repeat 2 22 0 3 1258 21 82 0 0 chrX 88217521 88217570 -78432726 + AT_rich Low_complexity Low_complexity 1 49 0 3 1258 758 172 13 0 chrX 88218405 88218556 -78431740 + CT-rich Low_complexity Low_complexity 3 155 0 3 1258 24 0 0 0 chrX 88219916 88219940 -78430356 + AT_rich Low_complexity Low_complexity 1 24 0 3 1258 360 257 0 0 chrX 88222032 88222102 -78428194 - ID4 SINE ID -12 71 2 3 1258 477 105 0 0 chrX 88222227 88222313 -78427983 + (CAAAA)n Simple_repeat Simple_repeat 2 87 0 3 1258 32 0 0 0 chrX 88222546 88222578 -78427718 + AT_rich Low_complexity Low_complexity 1 32 0 3 1258 24 32 0 0 chrX 88222630 88222661 -78427635 + AT_rich Low_complexity Low_complexity 1 31 0 3 1258 22 0 0 0 chrX 88223263 88223285 -78427011 + AT_rich Low_complexity Low_complexity 1 22 0 3 1258 276 30 0 0 chrX 88223572 88223605 -78426691 + (CTG)n Simple_repeat Simple_repeat 1 33 0 3 1258 283 60 20 20 chrX 88224336 88224387 -78425909 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 3 1258 2140 216 25 13 chrX 88225018 88225488 -78424808 + RMER5 LTR ERV1 57 532 -2 3 1258 223 284 67 22 chrX 88225673 88225763 -78424533 + MIRm SINE MIR 72 165 -111 3 1258 245 210 145 0 chrX 88225763 88225825 -78424471 - ID4 SINE ID -1 82 12 3 1258 5270 89 12 3 chrX 88226034 88226774 -78423522 + Lx3_Mus LINE L1 6263 7009 0 3 1258 877 246 84 9 chrX 88227320 88227652 -78422644 - L1MC2 LINE L1 -368 5976 5620 3 1258 1897 188 43 0 chrX 88227951 88228303 -78421993 - ORR1B2 LTR MaLR 0 367 1 3 1258 229 284 22 0 chrX 88228924 88228948 -78421348 + B1_Mus1 SINE Alu 25 85 -35 3 1258 231 140 0 23 chrX 88228948 88228992 -78421304 + MT2B LTR ERVL 206 248 -353 3 1258 1992 201 3 11 chrX 88229008 88229375 -78420921 + Lx5 LINE L1 6627 6990 -60 3 1258 186 71 0 0 chrX 88229758 88229786 -78420510 + (CAGA)n Simple_repeat Simple_repeat 3 30 0 3 1258 261 83 0 0 chrX 88229818 88229854 -78420442 + (TC)n Simple_repeat Simple_repeat 2 37 0 3 1258 291 104 0 0 chrX 88229856 88229904 -78420392 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1258 29821 117 9 15 chrX 88230065 88235958 -78414338 - L1_Mus1 LINE L1 0 6654 725 3 1258 316 297 22 7 chrX 88235955 88236094 -78414202 - L1_Mus1 LINE L1 -5801 815 675 3 1258 225 315 0 0 chrX 88236219 88236292 -78414004 - L1VL1 LINE L1 -6022 400 328 3 1258 407 358 8 24 chrX 88236375 88236501 -78413795 - RSINE1 SINE B4 -39 126 3 3 1258 1425 84 11 0 chrX 88236523 88236714 -78413582 + B2_Mm1t SINE B2 1 193 0 3 1258 533 269 43 70 chrX 88236785 88237157 -78413139 - Charlie4a DNA MER1_type -66 442 81 3 1258 37 0 0 0 chrX 88237250 88237287 -78413009 + AT_rich Low_complexity Low_complexity 1 37 0 3 1258 198 0 0 0 chrX 88237718 88237740 -78412556 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 3 1258 21 36 0 0 chrX 88237922 88237950 -78412346 + AT_rich Low_complexity Low_complexity 1 28 0 3 1258 195 162 0 0 chrX 88238717 88238754 -78411542 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1258 396 0 0 0 chrX 88238757 88238801 -78411495 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 1258 24 0 0 0 chrX 88239430 88239454 -78410842 + AT_rich Low_complexity Low_complexity 1 24 0 3 1258 197 305 112 31 chrX 88239756 88239854 -78410442 + MIR SINE MIR 32 137 -125 3 1258 854 239 30 5 chrX 88239994 88240196 -78410100 + B3 SINE B2 1 207 -9 3 1258 2965 182 24 2 chrX 88240196 88240740 -78409556 + Lx4A LINE L1 6503 7058 0 3 1258 22 0 0 0 chrX 88240740 88240762 -78409534 + AT_rich Low_complexity Low_complexity 1 22 0 3 1258 222 116 0 65 chrX 88242126 88242172 -78408124 + GA-rich Low_complexity Low_complexity 2 44 0 3 1258 1111 243 107 6 chrX 88242510 88242846 -78407450 + ORR1D1 LTR MaLR 1 370 -4 3 1258 448 333 34 20 chrX 88243244 88243391 -78406905 - B1_Mur3 SINE Alu 0 149 1 3 1258 261 0 0 0 chrX 88243586 88243615 -78406681 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1258 192 77 0 0 chrX 88243668 88243694 -78406602 + (TA)n Simple_repeat Simple_repeat 1 26 0 3 1258 404 152 25 0 chrX 88243826 88243905 -78406391 + (TATG)n Simple_repeat Simple_repeat 2 82 0 3 1258 386 333 0 0 chrX 88243916 88244003 -78406293 - B1_Mur3 SINE Alu -60 89 3 3 1258 24 0 0 0 chrX 88244191 88244215 -78406081 + AT_rich Low_complexity Low_complexity 1 24 0 3 1258 577 288 58 48 chrX 88245134 88245458 -78404838 + L1M2 LINE L1 5304 5630 -667 3 1258 342 232 0 47 chrX 88245834 88245920 -78404376 + RSINE1 SINE B4 48 129 -36 3 1258 388 0 40 71 chrX 88245967 88246066 -78404230 + (TAA)n Simple_repeat Simple_repeat 3 98 0 3 1258 2618 162 119 12 chrX 88246079 88246585 -78403711 + RMER2 LTR ERV1 1 560 -7 3 1258 375 60 0 0 chrX 88246585 88246635 -78403661 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1258 573 42 0 0 chrX 88246635 88246706 -78403590 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 3 1258 30 0 0 0 chrX 88246839 88246869 -78403427 + AT_rich Low_complexity Low_complexity 1 30 0 3 1258 300 188 30 30 chrX 88246912 88246978 -78403318 - PB1D10 SINE Alu -5 112 47 3 1258 231 216 0 0 chrX 88247741 88247795 -78402501 + B3 SINE B2 29 82 -134 3 1258 24 67 0 0 chrX 88247843 88247888 -78402408 + AT_rich Low_complexity Low_complexity 1 45 0 3 1258 478 268 35 14 chrX 88247920 88248064 -78402232 + B3 SINE B2 64 210 -6 3 1258 250 396 119 16 chrX 88248116 88248360 -78401936 - LTR16C LTR ERVL -15 474 206 3 1258 303 250 63 109 chrX 88249007 88249182 -78401114 + Lx6 LINE L1 7283 7449 -11 3 1258 356 330 30 58 chrX 88250293 88250638 -78399658 + MER31B LTR ERV1 1 446 -20 3 1258 22 56 0 0 chrX 88250692 88250728 -78399568 + AT_rich Low_complexity Low_complexity 1 36 0 3 1258 945 132 12 6 chrX 88251099 88251266 -78399030 - L1_Mus3 LINE L1 -7 6631 6464 3 1258 5107 121 111 6 chrX 88251406 88252273 -78398023 - RMER17B LTR ERVK 0 958 1 3 1258 256 324 61 14 chrX 88253447 88253594 -78396702 - Tigger7 DNA MER2_type -25 2466 2313 3 1258 525 377 8 50 chrX 88253609 88253849 -78396447 - Tigger7 DNA MER2_type -2213 278 49 3 1258 415 77 0 0 chrX 88254236 88254301 -78395995 + Lx LINE L1 6585 6649 -5 3 1258 286 343 10 20 chrX 88254571 88254672 -78395624 + MER5A DNA MER1_type 44 143 -46 3 1258 242 167 17 0 chrX 88254727 88254787 -78395509 + (TA)n Simple_repeat Simple_repeat 2 62 0 3 1258 405 70 0 0 chrX 88256039 88256096 -78394200 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1258 596 251 25 107 chrX 88257158 88257354 -78392942 + RMER20B LTR ERVK 448 627 0 3 1258 468 316 130 12 chrX 88257679 88257926 -78392370 - MTC LTR MaLR -20 401 126 3 1258 3825 14 0 0 chrX 88257926 88258364 -78391932 + L1Md_T LINE L1 5149 5586 -297 3 1258 8540 28 0 0 chrX 88258364 88259360 -78390936 + L1Md_T LINE L1 5587 6582 0 3 1258 454 244 35 0 chrX 88259365 88259480 -78390816 - MTC LTR MaLR -299 120 2 3 1258 2168 63 49 0 chrX 88260225 88260509 -78389787 - L1Md_F3 LINE L1 -86 5797 5500 3 1258 6152 39 0 4 chrX 88260507 88261247 -78389049 + L1Md_F3 LINE L1 5817 6553 -31 3 1258 468 51 0 0 chrX 88261247 88261306 -78388990 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 1258 1456 74 0 0 chrX 88261705 88261895 -78388401 - B2_Mm1a SINE B2 -3 190 1 3 1258 21 0 0 0 chrX 88261942 88261963 -78388333 + AT_rich Low_complexity Low_complexity 1 21 0 3 1258 405 0 0 0 chrX 88262084 88262129 -78388167 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1258 567 302 179 44 chrX 88263113 88263432 -78386864 + MTEa LTR MaLR 3 364 -15 3 1258 2230 119 14 38 chrX 88263452 88263818 -78386478 - IAPEY2_LTR LTR ERVK 0 357 1 3 1258 7584 75 0 2 chrX 88264622 88265630 -78384666 - L1_Mm LINE L1 -2628 5367 4338 3 1258 2320 43 0 3 chrX 88265626 88265908 -78384388 + L1Md_F2 LINE L1 5306 5586 -297 3 1258 8058 52 1 0 chrX 88265909 88266899 -78383397 + L1Md_F2 LINE L1 5588 6578 -4 3 1258 241 222 0 0 chrX 88267204 88267249 -78383047 + CT-rich Low_complexity Low_complexity 1 45 0 3 1258 284 337 133 0 chrX 88267800 88267898 -78382398 - RSINE1 SINE B4 -52 113 3 3 1258 369 0 0 0 chrX 88267979 88268020 -78382276 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1258 2187 250 105 34 chrX 88268184 88268236 -78382060 + Lx6 LINE L1 6692 6765 -695 3 1258 198 0 0 0 chrX 88268236 88268258 -78382038 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 3 1258 2187 250 105 34 chrX 88268258 88268592 -78381704 + Lx6 LINE L1 6766 7119 -341 3 1258 396 0 0 0 chrX 88268592 88268636 -78381660 + (TA)n Simple_repeat Simple_repeat 1 44 0 3 1258 456 72 0 0 chrX 88268636 88268704 -78381592 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 1258 2187 250 105 34 chrX 88268704 88268989 -78381307 + Lx6 LINE L1 7120 7412 -48 3 1258 521 318 17 50 chrX 88268989 88269168 -78381128 + MER2 DNA MER2_type 171 343 -2 3 1258 231 164 0 141 chrX 88269310 88269374 -78380922 + 4.5SRNA scRNA scRNA 31 85 -9 3 1258 746 93 9 0 chrX 88269325 88269433 -78380863 + B1_Mm SINE Alu 39 147 0 3 1258 319 53 35 17 chrX 88269433 88269491 -78380805 + (CAAAAA)n Simple_repeat Simple_repeat 2 60 0 3 1258 998 291 144 19 chrX 88269493 88269923 -78380373 + Lx8 LINE L1 6990 7473 0 3 1258 1712 111 11 4 chrX 88270005 88270267 -78380029 - L1_Mus3 LINE L1 -7 6631 6368 3 1258 4499 155 25 5 chrX 88270307 88271092 -78379204 - Lx2B LINE L1 -2 6998 6198 3 1258 2262 145 7 2 chrX 88271093 88271540 -78378756 - Lx2B LINE L1 -1058 5942 5488 3 1258 1117 204 130 57 chrX 88271535 88271670 -78378626 - L1_Mur2 LINE L1 -3133 2744 2609 3 1258 198 0 0 0 chrX 88271670 88271692 -78378604 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 4 1258 1117 204 130 57 chrX 88271692 88271763 -78378533 - L1_Mur2 LINE L1 -3269 2608 2515 3 1258 1282 107 5 16 chrX 88271763 88271953 -78378343 - B2_Mm2 SINE B2 -7 188 1 4 1258 1117 204 130 57 chrX 88271953 88272114 -78378182 - L1_Mur2 LINE L1 -3363 2514 2350 3 1258 2337 89 61 3 chrX 88272266 88272593 -78377703 - ORR1A1 LTR MaLR 0 346 1 4 1258 3544 213 121 9 chrX 88272780 88273827 -78376469 - L1_Mur2 LINE L1 -3507 2370 1206 3 1258 377 278 21 0 chrX 88273871 88273968 -78376328 + Kanga2_a DNA Tc2 150 248 -640 4 1258 246 278 75 47 chrX 88274006 88274121 -78376175 - PB1D9 SINE Alu 0 120 2 4 1258 630 0 0 0 chrX 88274258 88274328 -78375968 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 1258 380 219 0 14 chrX 88274328 88274402 -78375894 - ID_B1 SINE B4 -21 203 131 4 1258 231 326 54 33 chrX 88274332 88274424 -78375872 - B1F SINE Alu -28 121 28 4 1258 304 300 169 31 chrX 88274426 88274687 -78375609 + Kanga2_a DNA Tc2 242 538 -350 4 1258 317 336 84 9 chrX 88274700 88274913 -78375383 - Charlie2b DNA MER1_type -3 2779 2551 4 1258 236 318 15 0 chrX 88275095 88275161 -78375135 + Lx8 LINE L1 7152 7218 -255 4 1258 281 246 62 0 chrX 88275222 88275287 -78375009 + Lx8 LINE L1 7157 7225 -248 4 1258 252 303 13 13 chrX 88275276 88275353 -78374943 + Lx8 LINE L1 7147 7223 -250 4 1258 332 323 24 24 chrX 88275347 88275474 -78374822 + Lx8 LINE L1 7157 7283 -190 4 1258 817 259 30 0 chrX 88275772 88275973 -78374323 + B3 SINE B2 4 210 -6 4 1258 28 48 0 0 chrX 88276114 88276156 -78374140 + AT_rich Low_complexity Low_complexity 1 42 0 4 1258 542 271 69 0 chrX 88276260 88276404 -78373892 + B3A SINE B2 3 156 -42 4 1258 225 0 0 0 chrX 88276410 88276435 -78373861 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 1258 228 377 0 0 chrX 88276483 88276544 -78373752 + B4 SINE B4 86 146 -146 4 1258 230 276 28 130 chrX 88276698 88276806 -78373490 + PB1 SINE Alu 1 97 -30 4 1258 228 261 122 92 chrX 88276703 88276834 -78373462 + ID_B1 SINE B4 87 221 -3 4 1258 276 294 32 11 chrX 88276912 88277005 -78373291 + Lx8 LINE L1 7152 7246 -227 4 1258 623 189 7 70 chrX 88277019 88277161 -78373135 + B1_Mur2 SINE Alu 17 149 0 4 1258 259 300 57 0 chrX 88277167 88277237 -78373059 + ID4 SINE ID 10 83 0 4 1258 341 233 11 22 chrX 88277254 88277346 -78372950 - Charlie2b DNA MER1_type -887 1895 1805 4 1258 186 43 0 0 chrX 88277567 88277590 -78372706 + (TTTTTG)n Simple_repeat Simple_repeat 6 28 0 4 1258 9824 49 1 0 chrX 88277655 88279622 -78370674 - L1Md_F2 LINE L1 0 6582 4615 4 1258 1350 246 31 80 chrX 88279655 88280043 -78370253 - MTD LTR MaLR 0 419 51 4 1258 641 205 17 0 chrX 88280050 88280167 -78370129 + MTD LTR MaLR 280 398 -21 4 1258 215 114 23 0 chrX 88280508 88280552 -78369744 + (TTTTTG)n Simple_repeat Simple_repeat 3 47 0 4 1258 2748 180 5 22 chrX 88280555 88281156 -78369140 + L1_Mur2 LINE L1 4761 5351 -526 4 1258 19119 87 4 0 chrX 88281155 88281691 -78368605 + L1_Mm LINE L1 2941 3476 -2407 4 1258 183 42 0 0 chrX 88281691 88281715 -78368581 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4 1258 19119 87 4 0 chrX 88281715 88283518 -78366778 + L1_Mm LINE L1 3477 5288 -595 4 1258 3770 61 2 0 chrX 88283518 88283992 -78366304 + L1Md_F2 LINE L1 6105 6579 -3 4 1258 19119 87 4 0 chrX 88283992 88284414 -78365882 + L1_Mm LINE L1 5289 5710 -173 4 1258 355 116 121 0 chrX 88284414 88284486 -78365810 + MTC LTR MaLR 286 413 -8 4 1258 200 182 73 0 chrX 88284600 88284655 -78365641 + T-rich Low_complexity Low_complexity 5 63 0 4 1258 396 210 10 110 chrX 88284714 88284788 -78365508 - RMER17C LTR ERVK -137 273 206 4 1258 609 14 0 0 chrX 88284788 88284858 -78365438 + (GA)n Simple_repeat Simple_repeat 1 70 0 4 1258 396 210 10 110 chrX 88284858 88284992 -78365304 - RMER17C LTR ERVK -205 205 86 4 1258 513 0 0 0 chrX 88285025 88285082 -78365214 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 4 1258 476 281 82 7 chrX 88285150 88285297 -78364999 - B3A SINE B2 -3 195 38 4 1258 343 313 0 10 chrX 88285425 88285525 -78364771 + RMER21B LTR ERV1 95 193 -649 4 1258 276 53 0 0 chrX 88285564 88285602 -78364694 + (A)n Simple_repeat Simple_repeat 1 38 0 4 1258 459 249 109 78 chrX 88285602 88285794 -78364502 + RMER21B LTR ERV1 370 567 -275 4 1258 261 143 0 0 chrX 88285883 88285925 -78364371 - B2_Mm2 SINE B2 -153 42 1 4 1258 277 337 28 47 chrX 88286405 88286511 -78363785 - L2b LINE L2 -6 3369 3266 4 1258 21 57 0 0 chrX 88286571 88286606 -78363690 + AT_rich Low_complexity Low_complexity 1 35 0 4 1258 987 196 30 12 chrX 88286611 88286814 -78363482 - B3 SINE B2 -10 206 6 4 1258 270 369 93 7 chrX 88286790 88286940 -78363356 - B4A SINE B4 -89 203 41 4 1258 1534 105 11 41 chrX 88286989 88287256 -78363040 - L1_Mus3 LINE L1 -6 6632 6374 4 1258 482 274 13 0 chrX 88287276 88287429 -78362867 - L1MA5 LINE L1 -7 6293 6139 4 1258 1174 336 30 11 chrX 88287723 88288255 -78362041 - Lx8 LINE L1 -229 7244 6703 4 1258 247 336 0 14 chrX 88288811 88288959 -78361337 + L1M4 LINE L1 2628 2773 -3373 4 1258 374 39 19 0 chrX 88289021 88289073 -78361223 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 4 1258 22 35 0 0 chrX 88289115 88289144 -78361152 + AT_rich Low_complexity Low_complexity 1 29 0 4 1258 22 35 0 0 chrX 88289293 88289322 -78360974 + AT_rich Low_complexity Low_complexity 1 29 0 4 1258 1187 203 50 111 chrX 88289479 88289822 -78360474 - RLTR41 LTR ERV1 -65 381 60 4 1258 406 315 51 5 chrX 88289981 88290198 -78360098 - MuRRS4-int LTR ERV1 -174 4889 4663 4 1258 1269 268 89 13 chrX 88291003 88291493 -78358803 - MuRRS4-int LTR ERV1 -1038 4025 3533 4 1258 1052 315 78 39 chrX 88291978 88292825 -78357471 - MuRRS4-int LTR ERV1 -1414 3276 2107 4 1258 437 361 65 15 chrX 88293269 88293671 -78356625 - MuRRS4-int LTR ERV1 -5812 1966 1545 4 1258 715 178 15 15 chrX 88294861 88294998 -78355298 - RLTR41 LTR ERV1 0 446 310 4 1258 21 0 0 0 chrX 88295003 88295024 -78355272 + AT_rich Low_complexity Low_complexity 1 21 0 4 1258 679 120 0 0 chrX 88295024 88295124 -78355172 - B2_Mm2 SINE B2 -93 102 3 4 1258 36233 31 0 0 chrX 88295311 88301355 -78348941 - L1Md_T LINE L1 0 6585 445 4 1258 22 0 0 0 chrX 88301420 88301442 -78348854 + AT_rich Low_complexity Low_complexity 1 22 0 4 1258 39 80 0 0 chrX 88301692 88301780 -78348516 + AT_rich Low_complexity Low_complexity 1 88 0 4 1258 847 212 23 1 chrX 88301856 88302089 -78348207 - Lx2 LINE L1 -106 6891 6721 4 1258 3442 161 74 5 chrX 88302113 88302737 -78347559 - Lx2B LINE L1 -1 6999 6333 4 1258 6749 188 198 18 chrX 88302767 88303358 -78346938 - L1_Mur1 LINE L1 -1699 4187 3591 4 1258 5228 72 4 7 chrX 88303358 88304056 -78346240 - L1Md_F2 LINE L1 -11 6571 5876 4 1258 6749 188 198 18 chrX 88304056 88305694 -78344602 - L1_Mur1 LINE L1 -2296 3590 1557 4 1258 201 74 0 0 chrX 88305703 88305730 -78344566 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 4 1258 25758 128 20 2 chrX 88305732 88307539 -78342757 - Lx3_Mus LINE L1 -15 6994 5164 4 1258 3628 64 12 62 chrX 88307539 88308058 -78342238 + MT2_Mm LTR ERVL 1 493 0 4 1258 25758 115 16 4 chrX 88308058 88310013 -78340283 - Lx3_Mus LINE L1 -723 5163 3191 4 1258 261 0 0 0 chrX 88310013 88310042 -78340254 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1258 25758 115 16 4 chrX 88310042 88311562 -78338734 - Lx3_Mus LINE L1 -2696 3190 1641 4 1258 12750 120 1 9 chrX 88311561 88311703 -78338593 + L1_Mm LINE L1 3823 3964 -1919 4 1258 292 22 22 22 chrX 88311703 88311749 -78338547 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 4 1258 12750 120 1 9 chrX 88311749 88313659 -78336637 + L1_Mm LINE L1 3965 5859 -24 4 1258 2209 188 33 96 chrX 88313657 88315032 -78335264 - Lx3_Mus LINE L1 -4247 1639 3 4 1258 11328 95 25 27 chrX 88315071 88316953 -78333343 - MusHAL1 LINE L1 -58 2654 775 4 1258 2744 228 45 53 chrX 88316953 88317600 -78332696 - RLTR26 LTR ERVK 0 642 1 4 1258 6183 115 7 1 chrX 88317600 88319206 -78331090 - L1VL4 LINE L1 -1932 1627 13 4 1258 2620 180 41 5 chrX 88319208 88320058 -78330238 - L1_Mur1 LINE L1 -4317 1569 385 4 1258 274 167 0 0 chrX 88320221 88320269 -78330027 - L1_Mur1 LINE L1 -6230 752 705 4 1258 357 387 18 27 chrX 88320533 88320756 -78329540 + L1M5 LINE L1 4730 4950 -1196 4 1258 367 221 0 11 chrX 88320798 88320885 -78329411 + Lx9 LINE L1 7073 7158 -486 4 1258 387 41 0 0 chrX 88320920 88320969 -78329327 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1258 309 377 24 5 chrX 88320977 88321182 -78329114 - Lx9 LINE L1 -237 7407 7199 4 1258 307 125 27 40 chrX 88321663 88321738 -78328558 + URR1B DNA MER1_type 86 159 -66 4 1258 522 0 0 0 chrX 88322092 88322150 -78328146 + (GA)n Simple_repeat Simple_repeat 1 58 0 4 1258 275 235 0 0 chrX 88322583 88322651 -78327645 + T-rich Low_complexity Low_complexity 1 68 0 4 1258 25 75 0 0 chrX 88323044 88323097 -78327199 + AT_rich Low_complexity Low_complexity 1 53 0 4 1258 1048 104 0 0 chrX 88323121 88323265 -78327031 + B1_Mus1 SINE Alu 5 148 0 4 1258 386 254 59 7 chrX 88323283 88323418 -78326878 - RMER1C Other Other 0 1342 1201 4 1258 198 0 0 0 chrX 88323453 88323475 -78326821 + (TCTA)n Simple_repeat Simple_repeat 1 22 0 4 1258 566 241 186 45 chrX 88323545 88323792 -78326504 - RLTR10A LTR ERVK 0 411 130 4 1258 1581 211 41 27 chrX 88323829 88324301 -78325995 - RLTR45-int LTR ERVK -202 7042 6529 4 1258 987 302 51 45 chrX 88324417 88326300 -78323996 - RLTR45-int LTR ERVK -2311 5202 3224 4 1258 312 211 114 63 chrX 88326652 88326864 -78323432 - RLTR45-int LTR ERVK -1615 372 19 4 1258 406 233 18 131 chrX 88326870 88327038 -78323258 - RLTR10A LTR ERVK -123 288 140 4 1258 885 287 120 26 chrX 88327100 88327667 -78322629 + Lx9 LINE L1 6710 7493 -151 4 1258 652 104 0 45 chrX 88328187 88328298 -78321998 - Lx4B LINE L1 -119 6939 6834 4 1258 26 50 0 0 chrX 88329419 88329459 -78320837 + AT_rich Low_complexity Low_complexity 1 40 0 4 1258 732 156 0 0 chrX 88329519 88329647 -78320649 + (TA)n Simple_repeat Simple_repeat 2 129 0 4 1258 781 240 7 0 chrX 88330071 88330217 -78320079 - B3A SINE B2 -51 147 1 4 1258 2824 113 2 2 chrX 88331519 88331979 -78318317 - L1_Mus2 LINE L1 -2962 2921 2462 4 1258 17559 114 8 9 chrX 88331973 88335642 -78314654 + L1_Mus2 LINE L1 2901 6566 0 4 1258 4091 152 16 7 chrX 88335661 88336342 -78313954 + Lx4A LINE L1 6372 7058 0 4 1258 254 296 24 122 chrX 88336852 88336975 -78313321 + RLTR8 LTR ERVK 255 365 0 4 1258 839 295 129 21 chrX 88337110 88337436 -78312860 + MTEa LTR MaLR 19 379 0 4 1258 1345 174 11 7 chrX 88337557 88337830 -78312466 - L1_Mur2 LINE L1 -437 5440 5167 4 1258 200 280 113 48 chrX 88338036 88338160 -78312136 + L3 LINE CR1 875 1006 -3483 4 1258 560 321 111 71 chrX 88338227 88338579 -78311717 + RMER15 LTR ERVL 207 572 -3 4 1258 587 370 24 2 chrX 88340082 88340507 -78309789 - L1MA9 LINE L1 -177 6135 5702 4 1258 1480 195 28 200 chrX 88340500 88341083 -78309213 - L1_Mur2 LINE L1 -456 5421 4954 4 1258 3358 132 61 2 chrX 88341083 88341622 -78308674 - Lx4A LINE L1 -2 7056 6486 5 1258 1480 195 28 200 chrX 88341622 88341744 -78308552 - L1_Mur2 LINE L1 -924 4953 4837 4 1258 2190 202 16 36 chrX 88341739 88342289 -78308007 - L1_Mur2 LINE L1 -3483 2394 1856 4 157 3857 82 2 9 chrX 88342294 88342827 -78307469 + L1Md_F2 LINE L1 6054 6582 0 5 1259 12000 164 191 4 chrX 88342827 88344989 -78305307 + L1_Mus4 LINE L1 2379 4665 -1212 5 1259 347 0 23 0 chrX 88344989 88345032 -78305264 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 5 1259 12000 134 77 5 chrX 88345032 88346547 -78303749 + L1_Mus4 LINE L1 4666 6630 -6 5 1259 1046 169 21 0 chrX 88346548 88346737 -78303559 + L1_Mur2 LINE L1 5351 5543 -334 5 1259 1183 207 93 32 chrX 88346743 88346831 -78303465 + ORR1C2 LTR MaLR 88 171 -213 5 1259 666 0 0 0 chrX 88346831 88346905 -78303391 + (TC)n Simple_repeat Simple_repeat 1 74 0 5 1259 1183 207 93 32 chrX 88346905 88347096 -78303200 + ORR1C2 LTR MaLR 172 383 -1 5 1259 349 276 94 83 chrX 88347099 88347369 -78302927 - L1M4c LINE L1 -3983 2650 2378 5 1259 458 350 78 35 chrX 88347354 88347757 -78302539 - L1M4c LINE L1 -4527 2106 1538 5 1259 4513 35 2 4 chrX 88347978 88348516 -78301780 - L1Md_F2 LINE L1 0 6582 6046 5 1259 279 140 0 0 chrX 88348574 88348624 -78301672 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 1259 602 313 10 5 chrX 88348659 88348855 -78301441 - B3A SINE B2 0 198 2 5 1259 228 404 0 96 chrX 88348897 88349012 -78301284 + PB1D10 SINE Alu 1 104 -13 5 1259 334 324 129 84 chrX 88349279 88349767 -78300529 + HAL1 LINE L1 810 1319 -1188 5 1259 477 0 0 0 chrX 88349936 88349989 -78300307 + (TA)n Simple_repeat Simple_repeat 1 53 0 5 1259 281 319 156 6 chrX 88351248 88351428 -78298868 - MIR SINE MIR -33 229 23 5 1259 25 0 0 0 chrX 88351677 88351702 -78298594 + AT_rich Low_complexity Low_complexity 1 25 0 5 1259 4766 139 24 11 chrX 88351800 88352620 -78297676 - Lx3_Mus LINE L1 0 7009 6179 5 1259 4281 171 5 29 chrX 88352635 88353139 -78297157 - Lx3B LINE L1 -95 6878 6384 5 1259 2514 128 119 8 chrX 88353139 88353618 -78296678 - RLTR47_MM LTR ERV1 0 532 1 5 1259 4281 171 5 29 chrX 88353618 88353672 -78296624 - Lx3B LINE L1 -590 6383 6334 5 1259 4243 43 12 2 chrX 88353672 88354179 -78296117 - RLTR1B LTR ERV1 0 512 1 5 1259 4281 171 5 29 chrX 88354179 88354469 -78295827 - Lx3B LINE L1 -640 6333 6050 5 1259 1855 185 62 27 chrX 88354492 88354898 -78295398 + RMER16 LTR ERVK 114 533 0 5 1259 408 151 9 114 chrX 88354898 88355003 -78295293 - Lx3B LINE L1 -930 6043 5950 5 1259 4471 148 14 6 chrX 88355150 88355869 -78294427 + Lx4A LINE L1 6334 7058 0 5 1259 231 274 76 109 chrX 88356393 88356512 -78293784 + RLTR9A2 LTR ERVK 261 375 -8 5 1259 23 68 0 0 chrX 88356531 88356575 -78293721 + AT_rich Low_complexity Low_complexity 1 44 0 5 1259 548 316 13 0 chrX 88356659 88356814 -78293482 + MTEa LTR MaLR 19 175 -204 5 1259 366 269 106 44 chrX 88356867 88356967 -78293329 + MTEa LTR MaLR 260 370 -9 5 1259 369 0 0 0 chrX 88356967 88357008 -78293288 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 1259 366 269 106 44 chrX 88357008 88357020 -78293276 + MTEa LTR MaLR 371 379 0 5 1259 1314 167 15 7 chrX 88357133 88357404 -78292892 - L1_Mur2 LINE L1 -437 5440 5168 5 1259 182 288 113 48 chrX 88357610 88357734 -78292562 + L3 LINE CR1 875 1006 -3483 5 1259 545 320 107 73 chrX 88357801 88358155 -78292141 + RMER15 LTR ERVL 207 572 -3 5 1259 867 302 64 14 chrX 88359975 88360395 -78289901 - L1MA9 LINE L1 -351 5961 5521 5 1259 285 29 0 0 chrX 88360461 88360495 -78289801 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1259 189 127 0 68 chrX 88360644 88360703 -78289593 + CT-rich Low_complexity Low_complexity 1 55 0 5 1259 1498 251 3 17 chrX 88360705 88361053 -78289243 - RLTR11A2 LTR ERVK 0 527 185 5 1259 213 65 0 0 chrX 88361231 88361262 -78289034 + (CAAAAA)n Simple_repeat Simple_repeat 4 34 0 5 1259 260 237 71 51 chrX 88361309 88361407 -78288889 + RMER2 LTR ERV1 468 567 0 5 1259 729 254 0 63 chrX 88361522 88361728 -78288568 + B3A SINE B2 5 197 -1 5 1259 405 0 0 0 chrX 88362944 88362989 -78287307 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 1259 26 50 0 0 chrX 88363034 88363074 -78287222 + AT_rich Low_complexity Low_complexity 1 40 0 5 1259 26 0 0 0 chrX 88363480 88363506 -78286790 + AT_rich Low_complexity Low_complexity 1 26 0 5 1259 1010 70 0 0 chrX 88363506 88363635 -78286661 + B1_Mm SINE Alu 6 134 -13 5 1259 744 12 0 0 chrX 88363636 88363721 -78286575 + (GAAA)n Simple_repeat Simple_repeat 4 88 0 5 1259 616 149 0 0 chrX 88364456 88364563 -78285733 + Lx4B LINE L1 6835 6941 -117 5 1259 2456 74 3 6 chrX 88364756 88365083 -78285213 + IAPEY2_LTR LTR ERVK 32 357 0 5 1259 7544 129 13 27 chrX 88365083 88366491 -78283805 + IAPEY3-int LTR ERVK 22 1762 -5918 5 1259 2530 109 19 43 chrX 88366491 88366912 -78283384 - IAPLTR2a LTR ERVK 0 411 1 5 1259 36790 9 3 1 chrX 88366912 88371183 -78279113 - IAPEz-int LTR ERVK 0 6481 2204 5 1259 2786 28 2 179 chrX 88371183 88371657 -78278639 + RLTR10 LTR ERVK 1 390 0 5 1259 12388 23 10 1 chrX 88371667 88372897 -78277399 + RLTR10-int LTR ERVK 41 1346 -641 5 1259 203 0 37 0 chrX 88372897 88372924 -78277372 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1259 12388 21 14 1 chrX 88372924 88373544 -78276752 + RLTR10-int LTR ERVK 1347 1982 -5 5 1259 2788 28 2 179 chrX 88373546 88374020 -78276276 + RLTR10 LTR ERVK 1 390 0 5 1259 18263 18 1 7 chrX 88374020 88376209 -78274087 - IAPEz-int LTR ERVK -4272 2209 35 5 1259 2530 109 19 43 chrX 88376219 88376640 -78273656 - IAPLTR2a LTR ERVK 0 411 1 5 1259 6668 89 10 1 chrX 88376640 88377565 -78272731 + IAPEY3-int LTR ERVK 1757 2689 -4991 5 1259 3498 104 94 12 chrX 88377558 88378153 -78272143 + IAPEy-int LTR ERVK 4868 5511 -2002 5 1259 4271 62 69 0 chrX 88378149 88378745 -78271551 + IAPEY3-int LTR ERVK 7044 7680 0 5 1259 2395 66 22 6 chrX 88378755 88379076 -78271220 + IAPEY2_LTR LTR ERVK 32 357 0 5 1259 21 0 0 0 chrX 88379198 88379219 -78271077 + AT_rich Low_complexity Low_complexity 1 21 0 5 1259 621 305 158 29 chrX 88379409 88379959 -78270337 - Lx9 LINE L1 -157 7487 6867 5 1259 441 0 0 0 chrX 88380008 88380057 -78270239 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1259 411 21 0 0 chrX 88380057 88380104 -78270192 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1259 216 0 0 0 chrX 88380109 88380133 -78270163 + (TAGA)n Simple_repeat Simple_repeat 1 24 0 5 1259 370 242 65 24 chrX 88380171 88380294 -78270002 + RMER1C Other Other 1215 1342 0 5 1259 34 55 0 0 chrX 88380305 88380360 -78269936 + AT_rich Low_complexity Low_complexity 1 55 0 5 1259 523 71 12 12 chrX 88381244 88381330 -78268966 + (TC)n Simple_repeat Simple_repeat 1 86 0 5 1259 307 195 12 12 chrX 88381658 88381741 -78268555 - URR1B DNA MER1_type -57 168 86 5 1259 274 380 26 0 chrX 88382227 88382422 -78267874 + Lx9 LINE L1 7208 7407 -237 5 1259 951 82 0 0 chrX 88382437 88382584 -78267712 + (TG)n Simple_repeat Simple_repeat 2 148 0 5 1259 301 184 130 13 chrX 88382600 88382677 -78267619 - Lx9 LINE L1 -486 7158 7073 5 1259 329 240 126 57 chrX 88383000 88383159 -78267137 - L1MC LINE L1 -1489 4657 4488 5 1259 285 130 0 0 chrX 88383215 88383261 -78267035 + L1_Mur1 LINE L1 707 752 -6230 5 1259 1645 247 19 16 chrX 88383404 88383918 -78266378 + L1_Mur1 LINE L1 694 1209 -5773 5 1259 2940 98 21 4 chrX 88383920 88384365 -78265931 + L1VL4 LINE L1 500 953 -5349 5 1259 441 0 0 0 chrX 88384365 88384414 -78265882 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1259 2940 88 54 4 chrX 88384414 88384576 -78265720 + L1VL4 LINE L1 954 1121 -2438 5 1259 1546 92 24 4 chrX 88384595 88384846 -78265450 + L1VL4 LINE L1 1372 1627 -1932 5 1259 2679 242 10 58 chrX 88384846 88385520 -78264776 + RLTR26 LTR ERVK 1 642 0 5 1259 3393 116 3 34 chrX 88385520 88386130 -78264166 + MusHAL1 LINE L1 775 1365 -1347 5 1259 2152 101 41 0 chrX 88386100 88386466 -78263830 + MusHAL1 LINE L1 249 629 -2083 5 1259 1247 60 6 0 chrX 88386462 88386645 -78263651 + MusHAL1 LINE L1 2473 2656 -56 5 1259 23 33 0 0 chrX 88386651 88386681 -78263615 + AT_rich Low_complexity Low_complexity 1 30 0 5 1259 916 256 6 71 chrX 88386683 88387020 -78263276 + L1_Mur1 LINE L1 3 317 -6667 5 1259 5852 123 50 6 chrX 88387044 88388457 -78261839 + L1_Mur1 LINE L1 676 2150 -3736 5 1259 6096 143 37 0 chrX 88388464 88389476 -78260820 + Lx3_Mus LINE L1 5946 6994 -15 5 1259 429 20 0 0 chrX 88389479 88389529 -78260767 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 5 1259 11613 161 46 6 chrX 88389538 88389965 -78260331 + L1_Mur1 LINE L1 1557 2004 -3882 5 1259 180 0 0 0 chrX 88389965 88389985 -78260311 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 1259 11613 161 46 6 chrX 88389985 88392047 -78258249 + L1_Mur1 LINE L1 2005 4145 -1741 5 1259 3674 174 24 5 chrX 88392130 88392787 -78257509 + Lx2B LINE L1 6326 6995 -5 5 1259 1576 153 11 4 chrX 88392792 88393067 -78257229 + Lx2 LINE L1 6721 6997 0 5 1259 369 352 103 35 chrX 88393117 88393682 -78256614 - L1MD LINE L1 -1707 4439 3837 5 1259 678 137 0 0 chrX 88393705 88393807 -78256489 + B2_Mm2 SINE B2 1 102 -93 5 1259 23 0 0 0 chrX 88393807 88393830 -78256466 + AT_rich Low_complexity Low_complexity 1 23 0 5 1259 711 197 7 21 chrX 88393834 88393974 -78256322 + RLTR41 LTR ERV1 309 446 0 5 1259 550 316 68 13 chrX 88394201 88394618 -78255678 + MuRRS4-int LTR ERV1 1292 1682 -3381 5 1259 1214 81 0 6 chrX 88394620 88394793 -78255503 + (GAAA)n Simple_repeat Simple_repeat 1 172 0 5 1259 2164 312 80 48 chrX 88395241 88397109 -78253187 + MuRRS4-int LTR ERV1 2092 4020 -1043 5 1259 9085 102 8 12 chrX 88397756 88399877 -78250419 + L1_Mus1 LINE L1 4460 6654 0 5 1259 208 233 26 52 chrX 88401155 88401232 -78249064 + GA-rich Low_complexity Low_complexity 2 76 0 5 1259 293 285 213 17 chrX 88401463 88401618 -78248678 - B4A SINE B4 -111 181 2 5 1259 225 305 0 0 chrX 88401847 88401906 -78248390 + tRNA-Thr-ACY tRNA tRNA 14 72 -5 5 1259 458 248 73 58 chrX 88401860 88401997 -78248299 + ID_B1 SINE B4 32 170 -54 5 1259 34364 54 3 4 chrX 88402558 88407855 -78242441 + L1Md_T LINE L1 335 5585 -298 5 1259 7799 55 20 0 chrX 88407856 88408832 -78241464 + L1Md_T LINE L1 5587 6582 0 5 1259 472 261 18 0 chrX 88409081 88409192 -78241104 - PB1D10 SINE Alu 0 117 5 5 1259 1433 246 18 80 chrX 88409423 88409811 -78240485 - MTD LTR MaLR -8 411 48 5 1259 655 202 46 8 chrX 88409803 88409933 -78240363 + MTC LTR MaLR 266 400 -21 5 1259 329 278 66 16 chrX 88409937 88410120 -78240176 - Kanga2_a DNA Tc2 -107 781 590 5 1259 186 24 45 68 chrX 88410298 88410342 -78239954 + (TTG)n Simple_repeat Simple_repeat 3 45 0 5 1259 1003 129 7 0 chrX 88410342 88410489 -78239807 - B1_Mus1 SINE Alu 0 148 1 5 1259 439 31 0 30 chrX 88410493 88410560 -78239736 + (TTTTG)n Simple_repeat Simple_repeat 1 65 0 5 1259 2616 194 10 3 chrX 88410560 88411149 -78239147 + L1_Mur2 LINE L1 4764 5356 -521 5 1259 363 231 11 21 chrX 88411358 88411451 -78238845 + Charlie2b DNA MER1_type 1804 1895 -887 5 1259 257 310 56 0 chrX 88411468 88411539 -78238757 - ID4 SINE ID 0 83 9 5 1259 588 263 0 22 chrX 88411547 88411683 -78238613 - B1_Mur2 SINE Alu 0 149 17 5 1259 238 297 14 0 chrX 88411716 88411790 -78238506 - Lx8 LINE L1 -247 7226 7152 6 1259 249 83 0 0 chrX 88412267 88412303 -78237993 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1259 623 222 48 0 chrX 88412313 88412439 -78237857 - B3A SINE B2 -64 134 3 6 1259 22 56 0 0 chrX 88412542 88412578 -78237718 + AT_rich Low_complexity Low_complexity 1 36 0 6 1259 979 218 50 0 chrX 88412723 88412925 -78237371 - B3 SINE B2 -3 213 2 6 1259 247 242 15 29 chrX 88413382 88413450 -78236846 - Lx8 LINE L1 -250 7223 7157 6 1259 1151 201 128 36 chrX 88413546 88413850 -78236446 - IAPEY3_LTR LTR ERVK 0 332 1 6 1259 321 312 151 0 chrX 88414348 88414547 -78235749 - Kanga2_a DNA Tc2 -405 483 255 5 1259 273 315 0 59 chrX 88414560 88414678 -78235618 + ID_B1 SINE B4 112 222 -2 6 1259 329 359 184 0 chrX 88414722 88414928 -78235368 - Kanga2_a DNA Tc2 -640 248 5 5 1259 255 342 0 50 chrX 88415023 88415103 -78235193 - ID4 SINE ID -6 77 2 6 1259 421 274 111 34 chrX 88415118 88415326 -78234970 + L1MC5 LINE L1 6654 6877 -1084 6 1259 235 284 53 13 chrX 88415385 88415460 -78234836 + ID4_ SINE ID 2 79 -4 6 1259 604 247 59 118 chrX 88415467 88415509 -78234787 + L1MB3 LINE L1 5825 5866 -314 6 1259 3263 58 2 0 chrX 88415509 88415904 -78234392 - MTA_Mm LTR MaLR 0 396 1 6 1259 626 236 85 38 chrX 88415904 88416201 -78234095 + L1MB3 LINE L1 5867 6145 -38 6 1259 996 183 45 0 chrX 88416196 88416398 -78233898 - Lx9 LINE L1 -243 7401 7191 6 1259 299 225 45 0 chrX 88416431 88416542 -78233754 + Lx9 LINE L1 7495 7610 -34 6 1259 588 290 32 9 chrX 88416763 88416930 -78233366 + ID_B1 SINE B4 77 251 -41 6 1259 1574 245 102 45 chrX 88417032 88417243 -78233053 + RLTR42-int LTR ERVK 4229 4461 -1061 6 1259 618 49 0 0 chrX 88417243 88417325 -78232971 + (TCC)n Simple_repeat Simple_repeat 3 84 0 6 1259 1574 240 182 57 chrX 88417325 88417867 -78232429 + RLTR42-int LTR ERVK 4462 5061 -461 6 1259 1023 247 37 13 chrX 88418648 88418947 -78231349 + Lx7 LINE L1 7369 7674 -22 6 1259 990 89 7 15 chrX 88418948 88419084 -78231212 + B1_Mus1 SINE Alu 2 136 -12 6 1259 2271 178 20 7 chrX 88419521 88419929 -78230367 + MTC LTR MaLR 1 413 -8 6 1259 27654 108 8 2 chrX 88419954 88421277 -78229019 - L1_Mus2 LINE L1 0 6654 5237 6 1259 216 0 0 0 chrX 88421277 88421301 -78228995 + (TA)n Simple_repeat Simple_repeat 2 25 0 6 1259 405 0 0 0 chrX 88421301 88421345 -78228951 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1259 27654 120 14 3 chrX 88421345 88425133 -78225163 - L1_Mus2 LINE L1 -647 5236 1412 6 1259 1427 57 0 10 chrX 88425133 88425327 -78224969 - L1Md_F3 LINE L1 0 6584 6393 6 1259 27654 128 11 21 chrX 88425327 88426530 -78223766 - L1_Mus2 LINE L1 -4472 1411 217 6 1259 459 171 0 0 chrX 88426587 88426716 -78223580 + CT-rich Low_complexity Low_complexity 1 129 0 6 1259 282 56 0 0 chrX 88426716 88426752 -78223544 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1259 645 320 62 16 chrX 88427093 88427308 -78222988 - B4 SINE B4 -52 240 2 6 1259 26 0 0 0 chrX 88427921 88427947 -78222349 + AT_rich Low_complexity Low_complexity 1 26 0 6 1259 542 298 63 5 chrX 88428470 88428659 -78221637 + L1_Mur3 LINE L1 361 560 -7168 6 1259 467 248 7 14 chrX 88428655 88428802 -78221494 + L1_Mur3 LINE L1 836 981 -6747 6 1259 2865 197 71 10 chrX 88428806 88428926 -78221370 + L1_Mur3 LINE L1 1947 2081 -3799 6 1259 531 0 0 0 chrX 88428926 88428985 -78221311 + (GA)n Simple_repeat Simple_repeat 2 60 0 6 1259 258 32 0 0 chrX 88428985 88429015 -78221281 + (CCA)n Simple_repeat Simple_repeat 1 31 0 6 1259 2865 197 71 10 chrX 88429015 88429601 -78220695 + L1_Mur3 LINE L1 2082 2695 -3185 6 1259 496 309 5 46 chrX 88429599 88429796 -78220500 + Lx6 LINE L1 7151 7339 -121 6 1259 22 70 0 0 chrX 88429964 88430007 -78220289 + AT_rich Low_complexity Low_complexity 1 43 0 6 1259 510 212 55 0 chrX 88431239 88431385 -78218911 + L1_Mur3 LINE L1 4014 4167 -1713 6 1259 635 268 162 42 chrX 88432080 88432373 -78217923 + Lx9 LINE L1 7086 7417 -227 6 1259 192 125 0 0 chrX 88432373 88432405 -78217891 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1259 635 268 162 42 chrX 88432405 88432610 -78217686 + Lx9 LINE L1 7418 7644 0 6 1259 582 128 88 0 chrX 88432784 88432886 -78217410 + Lx2A LINE L1 6248 6358 -650 6 1259 3218 132 21 2 chrX 88432900 88433415 -78216881 + Lx2A LINE L1 6484 7008 0 6 1259 468 371 90 55 chrX 88433945 88434433 -78215863 + L1MCa LINE L1 330 834 -5917 6 1259 290 276 47 9 chrX 88434500 88434606 -78215690 + L1MCa LINE L1 868 977 -5774 6 1259 364 216 0 0 chrX 88434870 88434958 -78215338 + L1MCa LINE L1 1063 1150 -4895 6 1259 261 289 78 0 chrX 88435136 88435264 -78215032 + L1MCa LINE L1 1980 2117 -4634 6 1259 483 311 106 75 chrX 88435333 88435986 -78214310 + L1MCa LINE L1 2561 3256 -3308 6 1259 1148 51 0 0 chrX 88435986 88436123 -78214173 + B1_Mm SINE Alu 2 138 -9 6 1259 483 311 106 75 chrX 88436123 88436322 -78213974 + L1MCa LINE L1 3257 3439 -3125 6 1259 317 324 0 29 chrX 88436383 88436523 -78213773 - Lx5 LINE L1 -17 7033 6898 6 1259 368 298 16 8 chrX 88436751 88436873 -78213423 + Lx8 LINE L1 6310 6432 -1041 6 1259 2279 143 0 0 chrX 88436959 88437350 -78212946 - L1_Mm LINE L1 -1188 4695 4305 6 1259 6688 99 4 2 chrX 88437347 88438650 -78211646 + L1_Mus2 LINE L1 5256 6562 -4 6 1259 1167 291 16 8 chrX 88438713 88439080 -78211216 + Lx8 LINE L1 6446 6815 -658 6 1259 1974 186 73 192 chrX 88439082 88439781 -78210515 + RMER6C LTR ERVK 3 618 -72 6 1259 439 305 15 0 chrX 88440241 88440372 -78209924 + Lx8 LINE L1 7240 7372 -101 6 1259 1250 77 0 0 chrX 88440375 88440558 -78209738 - L1_Mm LINE L1 -1887 3996 3814 6 1259 7664 61 2 9 chrX 88440558 88441542 -78208754 + L1Md_F2 LINE L1 5593 6569 -13 6 1259 1066 184 5 5 chrX 88441799 88442012 -78208284 + Lx LINE L1 6425 6637 -17 6 1259 319 21 20 20 chrX 88442021 88442070 -78208226 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 6 1259 2231 42 70 0 chrX 88442245 88442532 -78207764 + L1Md_F2 LINE L1 6274 6580 -2 6 1259 16081 82 9 0 chrX 88442631 88445708 -78204588 + L1Md_F LINE L1 413 3516 -2367 6 1259 2010 50 0 0 chrX 88445707 88445966 -78204330 + L1Md_F LINE L1 5290 5548 -335 6 1259 363 308 23 0 chrX 88445979 88446112 -78204184 + L1_Rod LINE L1 73 208 -6964 6 1259 260 276 113 33 chrX 88446216 88446366 -78203930 + L1_Rod LINE L1 13 174 -6998 6 1259 2745 78 34 5 chrX 88446531 88446906 -78203390 - MTB LTR MaLR -1 399 14 6 1259 2732 91 8 0 chrX 88446906 88447289 -78203007 - L1_Mus3 LINE L1 -6 6632 6247 6 1259 2745 78 34 5 chrX 88447289 88447301 -78202995 - MTB LTR MaLR -387 13 2 6 1259 374 333 49 0 chrX 88447301 88447463 -78202833 + L1_Rod LINE L1 70 239 -6933 6 1259 474 318 5 20 chrX 88447528 88447730 -78202566 + L1_Rod LINE L1 15 213 -6959 6 1259 348 330 22 56 chrX 88447839 88448070 -78202226 + L1_Rod LINE L1 21 243 -6929 6 1259 405 278 55 60 chrX 88448138 88448337 -78201959 + L1_Rod LINE L1 7 204 -6968 6 1259 569 276 25 37 chrX 88448442 88448683 -78201613 + L1_Rod LINE L1 7 244 -6928 6 1259 226 273 0 0 chrX 88448881 88448936 -78201360 + L1_Rod LINE L1 186 240 -6932 6 1259 374 313 87 20 chrX 88448932 88449186 -78201110 + L1_Rod LINE L1 7 277 -6895 6 1259 275 323 46 76 chrX 88449154 88449392 -78200904 + L1_Rod LINE L1 13 243 -6929 6 1259 237 182 0 0 chrX 88449435 88449490 -78200806 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1259 28 0 0 0 chrX 88449520 88449548 -78200748 + AT_rich Low_complexity Low_complexity 1 28 0 6 1259 1501 207 80 5 chrX 88449571 88449945 -78200351 - Lx LINE L1 -1 6653 6252 6 1259 2579 163 113 17 chrX 88449953 88450477 -78199819 - RMER15 LTR ERVL -1 574 1 6 1259 664 154 98 15 chrX 88450481 88450613 -78199683 - RMER15-int LTR ERVL -47 4952 4810 6 1259 862 296 140 10 chrX 88450653 88451045 -78199251 - RMER15-int LTR ERVL -390 4609 4167 6 1259 1040 291 70 26 chrX 88451129 88451514 -78198782 - RMER15-int LTR ERVL -2600 2399 1998 6 1259 2528 102 44 0 chrX 88451527 88451911 -78198385 - L1_Mus4 LINE L1 -296 6340 5940 6 1259 5419 30 6 3 chrX 88452080 88452725 -78197571 + L1Md_F3 LINE L1 5924 6570 -14 6 1259 1850 79 0 4 chrX 88452734 88452989 -78197307 + L1Md_F2 LINE L1 6135 6388 -194 6 1259 13367 131 39 23 chrX 88453012 88455489 -78194807 - ETnERV2-int LTR ERVK -3835 3571 1056 6 1259 33 0 0 0 chrX 88455489 88455522 -78194774 + AT_rich Low_complexity Low_complexity 1 33 0 6 1259 607 228 82 79 chrX 88455524 88455839 -78194457 - ETnERV2-int LTR ERVK -2996 318 3 6 1259 2502 120 17 31 chrX 88455842 88456262 -78194034 - RLTR9F LTR ERVK -1 414 1 6 1259 826 188 58 12 chrX 88456262 88456505 -78193791 + L1_Mur3 LINE L1 1495 1748 -4132 6 1259 525 292 158 52 chrX 88456841 88457303 -78192993 - RMER13A LTR ERVK -320 540 30 6 1259 506 275 0 21 chrX 88457350 88457495 -78192801 - L1_Mur3 LINE L1 -7052 660 519 6 1259 25 51 0 0 chrX 88457499 88457538 -78192758 + AT_rich Low_complexity Low_complexity 1 39 0 6 1259 211 192 27 0 chrX 88458369 88458442 -78191854 + CT-rich Low_complexity Low_complexity 2 76 0 6 1259 1340 270 36 39 chrX 88458749 88458879 -78191417 + Lx6 LINE L1 6987 7114 -346 6 1259 483 18 0 0 chrX 88458879 88458935 -78191361 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 1259 1340 270 36 39 chrX 88458935 88459220 -78191076 + Lx6 LINE L1 7115 7400 -60 6 1259 2144 92 0 31 chrX 88459307 88459632 -78190664 - L1_Mus3 LINE L1 -517 6121 5807 6 1259 3307 96 26 14 chrX 88459634 88460130 -78190166 + L1_Mus3 LINE L1 6129 6630 -8 6 1259 223 178 0 0 chrX 88460330 88460375 -78189921 + A-rich Low_complexity Low_complexity 4 48 0 6 1259 545 314 29 17 chrX 88460378 88460618 -78189678 - Lx7 LINE L1 -336 7360 7118 6 1259 329 180 33 0 chrX 88460624 88460685 -78189611 + Lx7 LINE L1 7044 7106 -590 6 1259 7573 39 11 10 chrX 88460784 88461995 -78188301 - L1Md_F2 LINE L1 -6 6576 5365 6 1259 1812 241 50 4 chrX 88462049 88462512 -78187784 - Lx8 LINE L1 -658 6815 6332 6 1259 1049 280 43 39 chrX 88462518 88463089 -78187207 + Lx9 LINE L1 5355 5967 -1677 6 1259 22 0 0 0 chrX 88463536 88463558 -78186738 + AT_rich Low_complexity Low_complexity 1 22 0 6 1259 396 0 0 0 chrX 88463677 88463721 -78186575 + (TTTTG)n Simple_repeat Simple_repeat 4 47 0 6 1259 1138 95 0 0 chrX 88463755 88463902 -78186394 + B1_Mus1 SINE Alu 2 148 0 6 1259 234 0 0 0 chrX 88463902 88463928 -78186368 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1259 3086 81 44 16 chrX 88464063 88464147 -78186149 - L1Md_F2 LINE L1 0 6582 6483 6 1259 189 74 0 0 chrX 88464147 88464174 -78186122 + (CCCA)n Simple_repeat Simple_repeat 3 29 0 6 1259 3086 81 44 16 chrX 88464174 88464540 -78185756 - L1Md_F2 LINE L1 -100 6482 6120 6 1259 1795 119 96 0 chrX 88464540 88464843 -78185453 - L1Md_F LINE L1 -5724 795 464 6 1259 2445 136 28 0 chrX 88464847 88465273 -78185023 - L1_Mus3 LINE L1 -2 6636 6199 6 1259 239 79 0 26 chrX 88465536 88465575 -78184721 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 6 1259 31943 87 5 1 chrX 88466410 88472322 -78177974 - L1Md_F2 LINE L1 -17 6565 218 6 1259 543 101 0 0 chrX 88472370 88472449 -78177847 + (TA)n Simple_repeat Simple_repeat 2 80 0 6 1259 279 0 0 0 chrX 88472449 88472479 -78177817 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1259 21 36 0 0 chrX 88472560 88472588 -78177708 + AT_rich Low_complexity Low_complexity 1 28 0 6 1259 439 273 71 18 chrX 88472664 88472776 -78177520 - RSINE1 SINE B4 -36 129 12 6 1259 360 0 0 0 chrX 88472778 88472818 -78177478 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1259 6356 152 43 88 chrX 88472822 88473487 -78176809 - RLTR21 LTR ERVK -285 1287 677 6 1259 414 0 0 0 chrX 88473487 88473533 -78176763 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 157 488 179 0 0 chrX 88473536 88473631 -78176665 + Lx3C LINE L1 6874 6968 -8 6 1260 6356 152 43 88 chrX 88473631 88474308 -78175988 - RLTR21 LTR ERVK -896 676 1 6 1260 26 0 0 0 chrX 88475891 88475917 -78174379 + AT_rich Low_complexity Low_complexity 1 26 0 6 1260 6643 181 20 16 chrX 88476537 88478436 -78171860 + L1VL4 LINE L1 526 2429 -1130 6 1260 992 135 31 0 chrX 88478448 88478471 -78171825 + L1_Mur2 LINE L1 5164 5186 -691 7 1260 210 37 0 0 chrX 88478471 88478498 -78171798 + (CAA)n Simple_repeat Simple_repeat 2 28 0 7 1260 992 135 31 0 chrX 88478498 88478667 -78171629 + L1_Mur2 LINE L1 5187 5360 -517 7 1260 3259 115 15 6 chrX 88478661 88479237 -78171059 - Lx3C LINE L1 -1016 5960 5384 7 1260 254 236 194 0 chrX 88479722 88479794 -78170502 + Lx8 LINE L1 7252 7337 -136 7 1260 357 24 0 0 chrX 88479794 88479836 -78170460 + (CAAT)n Simple_repeat Simple_repeat 2 43 0 7 1260 320 256 98 8 chrX 88479842 88479964 -78170332 + L1M2 LINE L1 3042 3174 -2969 7 1260 1173 196 83 17 chrX 88480053 88480354 -78169942 + Lx4A LINE L1 6443 6763 -295 7 1260 713 33 11 0 chrX 88480466 88480558 -78169738 + (TG)n Simple_repeat Simple_repeat 2 94 0 7 1260 567 136 68 0 chrX 88480558 88480661 -78169635 - Lx2B LINE L1 -245 6755 6646 7 1260 23 86 0 0 chrX 88481098 88481156 -78169140 + AT_rich Low_complexity Low_complexity 1 58 0 7 1260 21 0 0 0 chrX 88481394 88481415 -78168881 + AT_rich Low_complexity Low_complexity 1 21 0 7 1260 3217 92 19 4 chrX 88481526 88482075 -78168221 - L1_Mus3 LINE L1 -491 6075 5519 7 1260 3282 148 5 14 chrX 88482077 88482638 -78167658 + L1_Mus3 LINE L1 6083 6638 0 7 1260 587 303 66 9 chrX 88482756 88482969 -78167327 - MLT1B LTR MaLR -2 388 164 7 1260 2834 79 7 0 chrX 88483429 88483836 -78166460 - L1_Mus1 LINE L1 -489 6078 5669 7 1260 3576 82 8 2 chrX 88483837 88484311 -78165985 + L1_Mus1 LINE L1 6091 6567 0 7 1260 385 358 50 59 chrX 88484736 88484956 -78165340 - MLT1A LTR MaLR -23 351 134 7 1260 225 400 47 23 chrX 88485029 88485157 -78165139 + B1F1 SINE Alu 1 131 -18 7 1260 604 260 24 39 chrX 88485181 88485389 -78164907 + L1_Rod LINE L1 5558 5762 -85 7 1260 808 231 35 10 chrX 88485394 88485591 -78164705 + B3 SINE B2 4 205 -11 7 1260 406 255 26 38 chrX 88485624 88485782 -78164514 + Lx4B LINE L1 6868 7050 -8 7 1260 513 0 0 0 chrX 88486051 88486108 -78164188 + (TA)n Simple_repeat Simple_repeat 2 58 0 7 1260 30 69 0 0 chrX 88486322 88486380 -78163916 + AT_rich Low_complexity Low_complexity 1 58 0 7 1260 491 146 20 20 chrX 88486933 88487023 -78163273 + PB1D9 SINE Alu 21 111 -9 7 1260 196 53 26 26 chrX 88487023 88487062 -78163234 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 7 1260 531 0 0 0 chrX 88487736 88487795 -78162501 + (TG)n Simple_repeat Simple_repeat 1 59 0 7 1260 618 323 0 25 chrX 88488220 88488423 -78161873 - B3A SINE B2 0 198 1 7 1260 240 35 0 0 chrX 88488977 88489006 -78161290 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1260 334 290 125 42 chrX 88491477 88491621 -78158675 + HAL1-3A_ME LINE L1 2284 2439 -419 7 1260 4820 205 73 5 chrX 88491844 88492959 -78157337 - Lx5 LINE L1 -55 6995 5806 7 1260 2429 33 0 0 chrX 88492975 88493281 -78157015 - L1Md_F2 LINE L1 -1915 3968 3663 7 1260 14821 42 3 2 chrX 88493282 88495307 -78154989 + L1Md_F2 LINE L1 3971 5995 -587 7 1260 5786 43 1 1 chrX 88495305 88496248 -78154048 - L1Md_F2 LINE L1 -252 6330 5388 7 1260 3426 158 60 44 chrX 88496248 88496948 -78153348 + RLTR13C1 LTR ERVK 273 983 0 7 1260 558 79 0 0 chrX 88496992 88497068 -78153228 + (TCTA)n Simple_repeat Simple_repeat 1 76 0 7 1260 3764 171 33 9 chrX 88497069 88497767 -78152529 - Lx4B LINE L1 -2 7056 6342 7 1260 810 193 0 0 chrX 88497913 88498084 -78152212 + (TA)n Simple_repeat Simple_repeat 2 172 0 7 1260 254 272 135 25 chrX 88498804 88499004 -78151292 + Lx8 LINE L1 7252 7473 0 7 1260 2386 238 48 3 chrX 88499337 88499999 -78150297 + L1_Mur3 LINE L1 282 973 -6739 7 1260 1565 189 26 33 chrX 88500000 88500453 -78149843 + L1_Mur3 LINE L1 983 1433 -4447 1 1260 320 115 20 3 chrX 88500493 88500549 -78149747 + ORR1A4 LTR MaLR 281 329 0 2 1260 424 152 0 12 chrX 88500549 88500629 -78149667 - L1_Mur3 LINE L1 -2236 3644 3566 3 1260 1403 151 112 0 chrX 88500629 88500888 -78149408 - ORR1A3 LTR MaLR -38 288 1 4 1260 7557 185 95 22 chrX 88500891 88501874 -78148422 + L1_Mur3 LINE L1 3643 4631 -1249 1 1260 303 104 0 0 chrX 88501874 88501922 -78148374 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1260 7557 185 95 22 chrX 88501922 88502770 -78147526 + L1_Mur3 LINE L1 4632 5607 -273 1 1260 851 211 39 21 chrX 88502760 88502993 -78147303 + Lx7 LINE L1 7460 7696 0 6 1260 3498 156 23 11 chrX 88503097 88504242 -78146054 - Lx3C LINE L1 -15 6569 5384 7 1260 337 206 162 0 chrX 88504723 88504791 -78145505 + Lx8 LINE L1 7252 7330 -143 8 1260 213 39 0 0 chrX 88504795 88504821 -78145475 + (CAAT)n Simple_repeat Simple_repeat 2 27 0 9 1260 1370 161 92 7 chrX 88505038 88505320 -78144976 + Lx4A LINE L1 6443 6748 -310 1 1260 477 0 0 0 chrX 88505451 88505504 -78144792 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1260 606 155 68 0 chrX 88505504 88505607 -78144689 - Lx2B LINE L1 -245 6755 6646 1 1260 5017 93 14 0 chrX 88505925 88506642 -78143654 - L1_Mm LINE L1 -1255 4628 3902 1 1260 339 85 0 0 chrX 88506754 88506801 -78143495 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 1 1260 928 142 0 7 chrX 88506803 88506945 -78143351 - B1_Mm SINE Alu -6 141 1 1 1260 404 346 170 26 chrX 88507621 88507968 -78142328 - RMER13A LTR ERVK -60 800 404 1 1260 390 333 61 0 chrX 88508041 88508173 -78142123 + B1_Mur2 SINE Alu 9 148 -1 1 1260 1418 198 90 42 chrX 88509412 88509791 -78140505 + Lx4B LINE L1 6654 7050 -8 1 1260 252 143 0 0 chrX 88509944 88510000 -78140296 + (A)n Simple_repeat Simple_repeat 1 56 0 1 1260 723 322 29 64 chrX 88510227 88510569 -78139727 - RLTR17 LTR ERVK -238 454 125 2 1260 207 69 0 0 chrX 88511197 88511226 -78139070 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 2 1260 5179 161 13 1 chrX 88511603 88512466 -78137830 - Lx2B LINE L1 -187 6813 5941 2 1260 5166 146 24 4 chrX 88512467 88513382 -78136914 - MusHAL1 LINE L1 -588 3027 2095 2 1260 729 252 22 25 chrX 88513379 88513731 -78136565 - MusHAL1 LINE L1 -5628 707 350 2 1260 6627 127 7 1 chrX 88514557 88516129 -78134167 - L1_Mus3 LINE L1 -36 6602 5022 2 1260 1987 130 12 0 chrX 88516131 88516453 -78133843 + L1_Mus1 LINE L1 4239 4564 -1319 2 1260 223 28 56 0 chrX 88516748 88516784 -78133512 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2 1260 4235 113 2 0 chrX 88516913 88517534 -78132762 - L1_Mus1 LINE L1 -286 5597 4976 2 1260 7222 92 5 1 chrX 88517532 88518549 -78131747 + L1_Mus1 LINE L1 5550 6566 -1 2 1260 688 87 0 37 chrX 88518549 88518657 -78131639 - ETnERV2-int LTR ERVK -5413 1993 1890 2 1260 207 0 0 0 chrX 88518657 88518680 -78131616 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 1260 294 328 71 29 chrX 88518878 88519298 -78130998 + L1M2 LINE L1 2155 2592 -4257 2 1260 1190 270 123 7 chrX 88519445 88519987 -78130309 + L1_Mur3 LINE L1 5129 5779 -461 3 1260 1934 201 40 40 chrX 88520119 88520566 -78129730 + RLTR1D LTR ERV1 157 603 -2 3 1260 726 321 47 12 chrX 88520571 88520829 -78129467 - MTD LTR MaLR -111 308 42 3 1260 662 297 138 31 chrX 88520879 88521037 -78129259 - RMER15 LTR ERVL -33 542 381 3 1260 216 0 0 0 chrX 88521037 88521061 -78129235 + (TC)n Simple_repeat Simple_repeat 2 25 0 3 1260 261 0 0 0 chrX 88521062 88521091 -78129205 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1260 662 297 138 31 chrX 88521091 88521250 -78129046 - RMER15 LTR ERVL -195 380 193 3 1260 212 122 24 0 chrX 88521468 88521509 -78128787 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 1260 792 331 43 46 chrX 88521542 88522241 -78128055 + L1M2 LINE L1 4088 4784 -2058 2 1260 1043 242 22 53 chrX 88522257 88522576 -78127720 + Lx7 LINE L1 7004 7312 -384 3 1260 215 247 12 24 chrX 88522778 88522861 -78127435 + (CTGGGG)n Simple_repeat Simple_repeat 1 82 0 3 1260 4057 186 15 12 chrX 88523947 88524878 -78125418 + Lx2B LINE L1 5714 6977 -23 3 1260 4323 26 93 93 chrX 88524873 88525208 -78125088 - L1_Mm LINE L1 -616 5267 4898 4 1260 240 167 46 77 chrX 88525208 88525273 -78125023 + RMER20A LTR ERVK 186 248 -268 4 1260 4323 26 93 93 chrX 88525273 88525540 -78124756 - L1_Mm LINE L1 -616 4897 4601 4 1260 2497 34 0 0 chrX 88525541 88525831 -78124465 + L1_Mm LINE L1 5297 5586 -297 4 1260 8486 31 0 0 chrX 88525831 88526826 -78123470 + L1Md_A LINE L1 5587 6581 -1 4 1260 280 41 40 20 chrX 88526857 88526907 -78123389 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 4 1260 962 257 21 8 chrX 88527128 88527367 -78122929 + Lx5 LINE L1 6809 7050 0 4 1260 419 261 0 11 chrX 88527526 88527619 -78122677 - B3 SINE B2 -98 118 27 4 1260 2651 79 38 3 chrX 88527653 88528022 -78122274 - L1_Mus2 LINE L1 0 6566 6185 4 1260 309 117 0 0 chrX 88528377 88528437 -78121859 + (T)n Simple_repeat Simple_repeat 1 60 0 4 1260 674 143 24 8 chrX 88528809 88528936 -78121360 + Lx LINE L1 6521 6649 -5 4 1260 792 153 0 0 chrX 88532493 88532630 -78117666 + CT-rich Low_complexity Low_complexity 1 137 0 4 1260 1164 204 112 16 chrX 88532796 88533100 -78117196 - Lx7 LINE L1 0 7696 7364 5 1260 357 24 0 0 chrX 88533102 88533144 -78117152 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1260 219 103 0 0 chrX 88533320 88533359 -78116937 + (T)n Simple_repeat Simple_repeat 1 39 0 5 1260 1043 116 0 0 chrX 88533360 88533506 -78116790 - B1_Mus1 SINE Alu -2 146 1 5 1260 336 282 78 0 chrX 88533520 88533623 -78116673 + L1MCa LINE L1 624 734 -5774 5 1260 293 286 86 43 chrX 88533678 88533864 -78116432 + L1MCa LINE L1 768 961 -5084 5 1260 286 315 10 0 chrX 88533873 88534012 -78116284 + L1MCa LINE L1 1010 1236 -5515 5 1260 426 270 128 12 chrX 88534052 88534303 -78115993 + L1MCa LINE L1 1834 2113 -4638 5 1260 441 0 0 0 chrX 88534995 88535044 -78115252 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 5 1260 849 227 193 20 chrX 88535139 88535440 -78114856 - ORR1C2 LTR MaLR -11 373 21 5 1260 630 39 0 0 chrX 88536736 88536813 -78113483 + (TA)n Simple_repeat Simple_repeat 2 78 0 5 1260 300 127 0 0 chrX 88536930 88536985 -78113311 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 5 1260 997 307 7 24 chrX 88537039 88537333 -78112963 - B4 SINE B4 -3 289 1 6 1260 459 0 0 0 chrX 88537702 88537753 -78112543 + (GGAA)n Simple_repeat Simple_repeat 3 53 0 6 1260 196 184 0 0 chrX 88537831 88537869 -78112427 - MIRc SINE MIR -83 185 148 6 1260 369 75 0 0 chrX 88537924 88537977 -78112319 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1260 296 374 57 89 chrX 88538122 88538297 -78111999 - MLT1A0 LTR MaLR -61 304 132 6 1260 1256 98 0 49 chrX 88538297 88538500 -78111796 - B2_Mm2 SINE B2 -1 194 2 6 1260 296 374 57 89 chrX 88538500 88538638 -78111658 - MLT1A0 LTR MaLR -234 131 1 6 1260 3863 102 0 25 chrX 88538787 88539357 -78110939 - L1_Mus1 LINE L1 -1 6566 6011 6 1260 8961 26 0 0 chrX 88539358 88541090 -78109206 - L1Md_T LINE L1 0 6582 4851 6 1260 12573 55 0 0 chrX 88541105 88542716 -78107580 + L1_Mm LINE L1 2042 3652 -2231 6 1260 249 33 0 0 chrX 88542819 88542849 -78107447 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6 1260 1177 102 16 0 chrX 88543865 88544051 -78106245 - L1_Mus3 LINE L1 -15 6623 6435 7 1260 224 0 65 0 chrX 88544917 88544948 -78105348 + (TTTTTA)n Simple_repeat Simple_repeat 2 34 0 7 1260 4259 30 2 0 chrX 88545265 88545766 -78104530 - L1Md_F2 LINE L1 -1 6581 6080 7 1260 4584 51 0 3 chrX 88546508 88547082 -78103214 - L1Md_F2 LINE L1 0 6582 6011 7 1260 26708 66 1 1 chrX 88547082 88550733 -78099563 + L1Md_F2 LINE L1 2346 5994 -588 7 1260 465 50 0 0 chrX 88550925 88550985 -78099311 + (CA)n Simple_repeat Simple_repeat 1 60 0 7 1260 831 48 0 0 chrX 88551212 88551316 -78098980 + (TTCTC)n Simple_repeat Simple_repeat 2 105 0 7 1260 447 19 0 0 chrX 88551316 88551367 -78098929 + (TTTC)n Simple_repeat Simple_repeat 1 52 0 7 1260 983 114 0 21 chrX 88551367 88551501 -78098795 - B1_Mus2 SINE Alu -12 135 3 7 1260 234 179 250 0 chrX 88551859 88551915 -78098381 + ID4_ SINE ID 13 82 -1 7 1260 334 254 97 7 chrX 88552987 88553104 -78097192 + B3A SINE B2 1 123 -72 7 1260 486 0 0 0 chrX 88553150 88553204 -78097092 + (CATA)n Simple_repeat Simple_repeat 2 55 0 8 1260 354 257 0 0 chrX 88553205 88553275 -78097021 + ID_B1 SINE B4 144 213 -11 8 1260 279 279 37 37 chrX 88553207 88553289 -78097007 + B1F SINE Alu 68 149 0 8 1260 189 0 0 0 chrX 88553991 88554012 -78096284 + (A)n Simple_repeat Simple_repeat 1 21 0 8 1260 549 232 16 16 chrX 88554012 88554139 -78096157 + B3 SINE B2 86 212 -4 7 1260 2496 249 10 35 chrX 88554177 88554641 -78095655 - Lx7 LINE L1 -177 7283 6879 8 1260 1027 134 6 6 chrX 88554641 88554821 -78095475 + (TC)n Simple_repeat Simple_repeat 1 180 0 8 1260 2496 252 37 83 chrX 88554821 88555347 -78094949 - Lx7 LINE L1 -808 6888 6349 8 1260 1324 187 86 15 chrX 88555450 88555776 -78094520 + RMER6C LTR ERVK 342 690 0 8 1260 575 311 18 12 chrX 88555976 88556139 -78094157 + RSINE1 SINE B4 2 165 0 8 1260 554 247 75 35 chrX 88556110 88556337 -78093959 + Lx9 LINE L1 7403 7638 -6 8 1260 1097 171 151 24 chrX 88556486 88556738 -78093558 + Lx7 LINE L1 7026 7309 -387 8 1260 1108 102 0 0 chrX 88556739 88556886 -78093410 + B1_Mus2 SINE Alu 1 147 0 9 1260 290 167 0 16 chrX 88572558 88572619 -78077677 + CT-rich Low_complexity Low_complexity 3 62 0 9 1260 696 191 15 0 chrX 88572641 88572777 -78077519 - B1_Mus2 SINE Alu 0 147 10 9 1260 34 0 0 0 chrX 88572892 88572926 -78077370 + AT_rich Low_complexity Low_complexity 1 34 0 9 1260 57 28 0 0 chrX 88573024 88573095 -78077201 + AT_rich Low_complexity Low_complexity 1 71 0 9 1260 31 58 0 0 chrX 88573201 88573253 -78077043 + AT_rich Low_complexity Low_complexity 1 52 0 9 1260 8473 31 0 1 chrX 88579357 88580645 -78069651 - L1Md_T LINE L1 0 6582 5296 9 1260 898 176 176 0 chrX 88580934 88581116 -78069180 + B3 SINE B2 2 215 -1 9 1260 611 290 107 11 chrX 88582032 88582395 -78067901 + L1MA6 LINE L1 5902 6299 -1 9 1260 935 257 14 85 chrX 88582804 88582986 -78067310 + Lx8 LINE L1 7105 7284 -189 9 1260 1409 214 93 48 chrX 88582986 88583407 -78066889 - RMER10A LTR ERVL 0 442 3 1 1260 935 257 14 85 chrX 88583407 88583505 -78066791 + Lx8 LINE L1 7285 7365 -108 9 1260 1945 272 130 17 chrX 88583491 88584389 -78065907 + L1_Mur3 LINE L1 49 1048 -6664 1 1260 3175 178 45 11 chrX 88584389 88585010 -78065286 - RLTR26 LTR ERVK 0 642 1 1 1260 503 236 42 65 chrX 88585010 88585070 -78065226 + L1_Mur3 LINE L1 1042 1095 -6617 1 1260 435 19 0 0 chrX 88585070 88585122 -78065174 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1260 503 236 42 65 chrX 88585122 88585149 -78065147 + L1_Mur3 LINE L1 1096 1122 -6590 1 1260 7167 45 3 2 chrX 88585149 88586008 -78064288 + L1Md_F2 LINE L1 5711 6570 -12 1 1260 503 240 72 61 chrX 88586008 88586117 -78064179 + L1_Mur3 LINE L1 1057 1204 -6508 1 1260 294 250 126 27 chrX 88586825 88586936 -78063360 - MTEb LTR MaLR 0 379 258 1 1260 1574 37 10 10 chrX 88587140 88587332 -78062964 + B2_Mm1t SINE B2 1 192 -1 1 1260 5566 69 5 35 chrX 88587431 88588259 -78062037 + RLTR13B4 LTR ERVK 1 803 0 1 1260 678 257 59 0 chrX 88589042 88589229 -78061067 + RCHARR1 DNA MER1_type 50 247 -727 1 1260 219 69 0 0 chrX 88589484 88589513 -78060783 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1 1260 335 235 9 105 chrX 88589806 88589920 -78060376 + MT2B LTR ERVL 155 257 -344 1 1260 704 226 0 0 chrX 88589819 88589952 -78060344 + B1_Mur4 SINE Alu 5 137 -13 1 1260 397 318 122 11 chrX 88591676 88591857 -78058439 + Lx8 LINE L1 6443 6643 -830 1 1260 6482 155 22 10 chrX 88591861 88592981 -78057315 - Lx4B LINE L1 -5 7053 5920 1 1260 246 304 40 73 chrX 88594342 88594466 -78055830 - PB1 SINE Alu -7 120 1 1 1260 21 0 0 0 chrX 88594478 88594499 -78055797 + AT_rich Low_complexity Low_complexity 1 21 0 1 1260 293 197 45 0 chrX 88594572 88594638 -78055658 - L1MEc LINE L1 -5543 857 789 1 1260 1212 196 72 62 chrX 88594953 88595237 -78055059 - Lx7 LINE L1 0 7696 7413 1 1260 315 0 0 0 chrX 88595237 88595272 -78055024 + (CAAAA)n Simple_repeat Simple_repeat 4 38 0 1 1260 1212 196 72 62 chrX 88595272 88595373 -78054923 - Lx7 LINE L1 -284 7412 7309 1 1260 288 53 0 0 chrX 88595381 88595419 -78054877 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 1260 1742 76 0 0 chrX 88595458 88595683 -78054613 - L1_Mus1 LINE L1 -1 6566 6342 1 1260 3445 91 7 0 chrX 88595683 88596146 -78054150 + L1_Mus1 LINE L1 5750 6215 -352 1 1260 213 119 0 0 chrX 88596147 88596189 -78054107 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 1 1260 2415 192 32 61 chrX 88596189 88596782 -78053514 - Lx7 LINE L1 -391 7305 6730 1 1260 315 0 0 0 chrX 88596782 88596817 -78053479 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1260 2722 204 107 95 chrX 88596818 88598002 -78052294 - RLTR25B LTR ERVK 0 1103 11 1 1260 851 207 154 0 chrX 88598016 88598185 -78052111 - Lx7 LINE L1 -963 6733 6539 1 1260 1847 138 3 9 chrX 88598185 88598500 -78051796 + RMER12 LTR ERVK 1 313 -1009 1 1260 213 39 0 0 chrX 88598506 88598532 -78051764 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 1260 802 260 65 88 chrX 88598532 88598916 -78051380 + RMER12 LTR ERVK 770 1144 -178 1 1260 335 189 40 0 chrX 88598953 88599027 -78051269 + RLTR21 LTR ERVK 1341 1417 -155 1 1260 584 337 83 7 chrX 88599434 88599724 -78050572 + MLT1A0 LTR MaLR 50 361 -4 1 1260 3823 190 66 24 chrX 88599743 88600063 -78050233 + RMER13B LTR ERVK 6 372 -536 1 1260 1090 92 0 11 chrX 88600063 88600239 -78050057 + (TA)n Simple_repeat Simple_repeat 2 175 0 1 1260 1068 81 0 14 chrX 88600239 88600377 -78049919 - B1_Mus1 SINE Alu -10 138 3 1 1260 3823 190 66 24 chrX 88600377 88600922 -78049374 + RMER13B LTR ERVK 373 907 -1 1 1260 21 0 0 0 chrX 88601191 88601212 -78049084 + AT_rich Low_complexity Low_complexity 1 21 0 1 1260 720 140 95 27 chrX 88601213 88601360 -78048936 - Lx4A LINE L1 -2 7056 6900 1 1260 359 266 23 15 chrX 88601476 88601606 -78048690 - Lx7 LINE L1 -5 7691 7561 1 1260 1972 234 30 24 chrX 88601648 88602113 -78048183 - Lx7 LINE L1 -263 7433 6966 1 1260 824 254 81 49 chrX 88602133 88602583 -78047713 - RMER2 LTR ERV1 0 567 1 1 1260 247 301 24 0 chrX 88602583 88602660 -78047636 - MLT2B4 LTR ERVL -473 83 5 1 1260 2433 92 14 1 chrX 88602759 88603187 -78047109 + Lx LINE L1 5484 5916 -720 1 1260 2710 91 16 11 chrX 88603194 88603629 -78046667 + MTA_Mm-int LTR MaLR 662 1098 0 1 1260 3067 83 0 5 chrX 88603629 88604027 -78046269 + MTA_Mm LTR MaLR 1 396 0 1 157 4947 114 4 22 chrX 88604027 88604781 -78045515 + Lx LINE L1 5914 6653 -1 1 1261 334 330 22 69 chrX 88605672 88605903 -78044393 + RMER15 LTR ERVL 316 535 -40 1 1261 239 198 40 119 chrX 88606159 88606285 -78044011 - Lx8 LINE L1 0 7473 7358 1 1261 2881 286 104 7 chrX 88606295 88607196 -78043100 - Lx8 LINE L1 -356 7117 6129 1 1261 21 0 0 0 chrX 88607537 88607558 -78042738 + AT_rich Low_complexity Low_complexity 1 21 0 1 1261 198 0 0 0 chrX 88608580 88608602 -78041694 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 1261 183 80 0 0 chrX 88610150 88610175 -78040121 + (TATATG)n Simple_repeat Simple_repeat 6 30 0 1 1261 290 345 79 7 chrX 88610240 88610380 -78039916 - MLT1A0 LTR MaLR -206 159 10 1 1261 268 341 40 0 chrX 88610883 88611009 -78039287 + MLT1F-int LTR MaLR 976 1106 -383 1 1261 982 256 174 35 chrX 88611088 88611456 -78038840 + MTD LTR MaLR 1 419 0 1 1261 258 235 103 84 chrX 88611560 88611667 -78038629 + MTD LTR MaLR 18 126 -293 1 1261 298 360 17 33 chrX 88612298 88612467 -78037829 + B4A SINE B4 4 174 -118 1 1261 278 333 41 18 chrX 88612652 88612823 -78037473 + L1MCb LINE L1 418 592 -6159 1 1261 492 18 0 0 chrX 88612871 88612928 -78037368 + (GA)n Simple_repeat Simple_repeat 2 58 0 1 1261 1021 282 112 28 chrX 88613036 88613689 -78036607 + L1MCb LINE L1 443 1150 -4895 1 1261 342 252 87 0 chrX 88613775 88613890 -78036406 + L1MCb LINE L1 1912 2036 -4715 1 1261 22 35 0 0 chrX 88614558 88614587 -78035709 + AT_rich Low_complexity Low_complexity 1 29 0 1 1261 767 107 8 22 chrX 88614596 88614730 -78035566 + L1Md_F2 LINE L1 6447 6578 -4 1 1261 333 236 0 0 chrX 88614845 88614951 -78035345 + (TA)n Simple_repeat Simple_repeat 2 107 0 1 1261 22 70 0 0 chrX 88615372 88615415 -78034881 + AT_rich Low_complexity Low_complexity 1 43 0 1 1261 28 0 0 0 chrX 88615509 88615537 -78034759 + AT_rich Low_complexity Low_complexity 1 28 0 1 1261 609 178 14 104 chrX 88615665 88615809 -78034487 - ORR1C2 LTR MaLR 0 384 254 1 1261 875 264 105 10 chrX 88615819 88616114 -78034182 + Lx7 LINE L1 6977 7299 -397 1 1261 2908 136 11 20 chrX 88616125 88616637 -78033659 - L1_Mus4 LINE L1 -990 5646 5101 1 1261 1031 257 40 8 chrX 88618089 88618336 -78031960 + MTC LTR MaLR 1 255 -166 1 1261 222 136 0 0 chrX 88619311 88619355 -78030941 + (GAAA)n Simple_repeat Simple_repeat 2 45 0 1 1261 1273 142 28 5 chrX 88619356 88619569 -78030727 + MTC LTR MaLR 196 413 -8 1 1261 504 0 0 0 chrX 88619616 88619672 -78030624 + (TC)n Simple_repeat Simple_repeat 2 57 0 1 1261 501 62 0 0 chrX 88619672 88619736 -78030560 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1261 252 98 81 16 chrX 88619932 88619994 -78030302 + Lx3_Mus LINE L1 6936 7001 -8 1 1261 579 335 40 6 chrX 88620105 88620282 -78030014 - B4 SINE B4 -66 226 44 1 1261 246 233 114 67 chrX 88620778 88620947 -78029349 + Lx4B LINE L1 6881 7050 -8 1 1261 25 31 0 0 chrX 88621397 88621429 -78028867 + AT_rich Low_complexity Low_complexity 1 32 0 1 1261 667 286 20 5 chrX 88621474 88621671 -78028625 + L1_Mur3 LINE L1 345 544 -7168 1 1261 496 271 14 14 chrX 88621667 88621813 -78028483 + L1_Mur3 LINE L1 820 965 -6747 1 1261 3966 43 19 0 chrX 88622041 88622527 -78027769 + L1Md_F2 LINE L1 5816 6310 -272 1 1261 814 67 0 0 chrX 88622527 88622646 -78027650 + L1Md_F2 LINE L1 6452 6570 -12 1 1261 3131 147 58 5 chrX 88623065 88623692 -78026604 + Lx2A LINE L1 6260 7008 0 1 1261 225 314 31 55 chrX 88624582 88624710 -78025586 + L1MCb LINE L1 710 834 -5917 1 1261 371 283 256 25 chrX 88624740 88625243 -78025053 + L1MCb LINE L1 604 1150 -4895 1 1261 306 292 74 6 chrX 88625379 88625541 -78024755 + L1MCb LINE L1 1945 2117 -4634 1 1261 714 304 124 49 chrX 88625610 88626431 -78023865 + L1MCb LINE L1 2561 3443 -3121 1 1261 407 299 7 7 chrX 88626481 88626616 -78023680 - Lx6 LINE L1 -43 7417 7283 1 1261 329 259 105 15 chrX 88626616 88626749 -78023547 + L1MCb LINE L1 3487 3631 -2933 1 1261 505 264 33 0 chrX 88626856 88626977 -78023319 + Lx8 LINE L1 6310 6434 -1039 1 1261 227 241 0 54 chrX 88626983 88627075 -78023221 + Lx9 LINE L1 7546 7632 -12 1 1261 2535 124 94 2 chrX 88627064 88627500 -78022796 - L1_Mm LINE L1 -1188 4695 4220 1 1261 1360 90 26 0 chrX 88627500 88627689 -78022607 - B2_Mm2 SINE B2 0 195 2 1 1261 4476 122 12 22 chrX 88627861 88628603 -78021693 - L1_Mm LINE L1 -1652 4231 3497 1 1261 6391 88 6 8 chrX 88628602 88629506 -78020790 + L1Md_F2 LINE L1 4685 5586 -297 1 1261 6923 102 2 1 chrX 88629506 88630488 -78019808 + L1Md_F2 LINE L1 5587 6569 -13 1 1261 5805 89 9 1 chrX 88630500 88631295 -78019001 - L1_Mus1 LINE L1 -10 6557 5757 1 1261 6165 60 48 5 chrX 88631297 88632117 -78018179 - RLTR13A LTR ERVK 0 855 1 1 1261 374 346 53 60 chrX 88632576 88632879 -78017417 - RLTR25B LTR ERVK -804 299 1 1 1261 424 169 0 25 chrX 88633065 88633144 -78017152 + RMER6C LTR ERVK 613 689 -1 1 1261 1724 296 37 27 chrX 88633144 88633740 -78016556 + Lx8 LINE L1 6811 7412 -61 1 1261 2093 96 7 3 chrX 88633976 88634278 -78016018 + L1_Mus3 LINE L1 6330 6632 -6 1 1261 562 296 113 20 chrX 88634435 88634728 -78015568 + L1MD LINE L1 5372 5691 -2304 1 1261 263 361 46 9 chrX 88634857 88634966 -78015330 + B3 SINE B2 91 203 -13 1 1261 278 291 79 5 chrX 88635631 88635845 -78014451 + L1M2 LINE L1 5254 5483 -814 1 1261 296 341 85 23 chrX 88636012 88636141 -78014155 + B1F SINE Alu 3 139 -10 1 1261 279 351 22 22 chrX 88636186 88636320 -78013976 + B1F SINE Alu 2 135 -14 1 1261 315 132 0 0 chrX 88636366 88636434 -78013862 + (A)n Simple_repeat Simple_repeat 1 68 0 1 1261 1192 97 11 0 chrX 88639454 88639640 -78010656 - L1_Mus3 LINE L1 -1 6637 6450 1 1261 1079 169 44 13 chrX 88639811 88640021 -78010275 + Lx LINE L1 6420 6627 -27 1 1261 374 0 22 0 chrX 88640021 88640067 -78010229 + (TAA)n Simple_repeat Simple_repeat 2 48 0 1 1261 1079 169 44 13 chrX 88640067 88640084 -78010212 + Lx LINE L1 6628 6654 0 1 1261 435 372 8 8 chrX 88640726 88640978 -78009318 + L1_Rod LINE L1 7 258 -6914 1 1261 482 303 21 26 chrX 88641041 88641234 -78009062 + L1_Rod LINE L1 17 208 -6964 1 1261 309 292 102 0 chrX 88641339 88641486 -78008810 + L1_Rod LINE L1 13 174 -6998 1 1261 2890 81 10 12 chrX 88641654 88642040 -78008256 - MTB LTR MaLR -1 399 14 1 1261 2485 97 5 16 chrX 88642040 88642418 -78007878 - L1_Mus3 LINE L1 -17 6621 6248 1 1261 2890 81 10 12 chrX 88642418 88642431 -78007865 - MTB LTR MaLR -387 13 1 1 1261 427 352 49 0 chrX 88642431 88642593 -78007703 + L1_Rod LINE L1 70 239 -6933 1 1261 531 343 8 16 chrX 88642658 88642904 -78007392 + L1_Rod LINE L1 15 258 -6914 1 1261 412 288 8 46 chrX 88642965 88643096 -78007200 + L1_Rod LINE L1 17 142 -7030 1 1261 325 305 10 60 chrX 88643456 88643655 -78006641 + L1_Rod LINE L1 16 204 -6968 1 1261 349 358 50 25 chrX 88643768 88643966 -78006330 + L1_Rod LINE L1 13 215 -6957 1 1261 385 308 49 53 chrX 88644058 88644284 -78006012 + L1_Rod LINE L1 7 231 -6941 1 1261 297 283 17 42 chrX 88644362 88644480 -78005816 + L1_Rod LINE L1 7 121 -7051 1 1261 281 303 34 0 chrX 88644750 88644839 -78005457 + L1_Rod LINE L1 149 240 -6932 1 1261 392 318 107 32 chrX 88644835 88645088 -78005208 + L1_Rod LINE L1 7 278 -6894 1 1261 259 324 36 105 chrX 88645057 88645305 -78004991 + L1_Rod LINE L1 13 243 -6929 1 1261 186 43 0 0 chrX 88645371 88645394 -78004902 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1261 23 0 0 0 chrX 88645404 88645427 -78004869 + AT_rich Low_complexity Low_complexity 1 23 0 1 1261 6058 75 36 12 chrX 88645456 88646293 -78004003 - L1_Mus1 LINE L1 -1 6566 5710 2 1261 357 171 43 0 chrX 88646294 88646364 -78003932 - RMER15 LTR ERVL -502 73 1 2 1261 681 174 97 15 chrX 88646366 88646500 -78003796 - RMER15-int LTR ERVL -45 4954 4810 2 1261 887 282 145 15 chrX 88646540 88646932 -78003364 - RMER15-int LTR ERVL -390 4609 4167 2 1261 1852 294 57 53 chrX 88646984 88647123 -78003173 - RMER15-int LTR ERVL -2613 2386 2250 2 1261 996 98 15 0 chrX 88647123 88647256 -78003040 + B1_Mus2 SINE Alu 1 135 -12 2 1261 510 17 0 0 chrX 88647264 88647323 -78002973 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 2 1261 1852 294 57 53 chrX 88647323 88647839 -78002457 - RMER15-int LTR ERVL -2752 2247 1719 2 1261 524 319 68 8 chrX 88647927 88648164 -78002132 + L1_Rod LINE L1 14 264 -6908 1 1261 304 226 26 78 chrX 88648208 88648323 -78001973 + L1_Rod LINE L1 1 109 -7063 2 1261 3512 95 0 2 chrX 88648499 88648993 -78001303 - L1_Mus4 LINE L1 -1 6635 6143 2 1261 2238 80 0 0 chrX 88648993 88649293 -78001003 + L1Md_F2 LINE L1 5818 6117 -465 2 1261 498 17 0 0 chrX 88649324 88649383 -78000913 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1261 2006 98 7 0 chrX 88649598 88649884 -78000412 + Lx LINE L1 5587 5874 -780 2 1261 6828 65 0 2 chrX 88649882 88650749 -77999547 + L1Md_F2 LINE L1 4722 5586 -297 2 1261 8052 48 2 4 chrX 88650750 88651746 -77998550 + L1Md_F2 LINE L1 5588 6581 -1 2 1261 4724 142 21 7 chrX 88651740 88652515 -77997781 + Lx LINE L1 5860 6645 -9 2 1261 239 296 40 83 chrX 88653557 88653615 -77996681 - L1M1 LINE L1 -504 5808 5753 2 1261 534 103 0 0 chrX 88653615 88653693 -77996603 + (TA)n Simple_repeat Simple_repeat 2 79 0 2 1261 328 305 80 66 chrX 88653693 88653995 -77996301 - L1M1 LINE L1 -550 5750 5445 2 1261 250 361 97 0 chrX 88654022 88654166 -77996130 + Lx9 LINE L1 6568 6725 -919 2 1261 799 274 90 48 chrX 88654184 88654541 -77995755 + Lx9 LINE L1 6778 7149 -495 2 1261 520 215 8 83 chrX 88654541 88654673 -77995623 + ORR1C1 LTR MaLR 1 122 -262 2 1261 2543 196 14 14 chrX 88654670 88655172 -77995124 + RLTR20B2 LTR ERVK 5 506 -54 2 1261 1008 209 55 47 chrX 88655153 88655409 -77994887 + ORR1C1 LTR MaLR 121 378 0 2 1261 404 345 9 24 chrX 88655409 88655620 -77994676 + Lx9 LINE L1 7145 7352 -292 2 1261 472 305 16 0 chrX 88655938 88656066 -77994230 + B1F SINE Alu 13 142 -7 2 1261 342 0 0 0 chrX 88656070 88656108 -77994188 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1261 678 292 71 75 chrX 88656154 88656511 -77993785 + MTE2a LTR MaLR 11 369 -50 2 1261 21 36 0 0 chrX 88656918 88656946 -77993350 + AT_rich Low_complexity Low_complexity 1 28 0 2 1261 784 277 13 49 chrX 88656955 88657179 -77993117 + B3 SINE B2 1 216 0 2 1261 259 317 0 19 chrX 88657262 88657365 -77992931 + Lx9 LINE L1 7165 7265 -379 2 1261 1123 75 7 0 chrX 88657365 88657511 -77992785 + B1_Mus2 SINE Alu 1 147 0 2 1261 348 24 0 0 chrX 88657575 88657616 -77992680 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1261 1422 330 73 12 chrX 88658108 88658669 -77991627 + Lx8 LINE L1 6486 7080 -393 2 1261 1112 91 0 0 chrX 88659007 88659150 -77991146 + B1_Mm SINE Alu 1 143 -4 2 1261 263 85 21 0 chrX 88659153 88659200 -77991096 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 2 1261 1945 291 62 79 chrX 88659929 88660076 -77990220 - RMER13A LTR ERVK -39 821 665 2 1261 861 24 63 0 chrX 88660076 88660203 -77990093 + L1Md_F2 LINE L1 6448 6582 0 2 1261 1945 291 62 79 chrX 88660203 88660890 -77989406 - RMER13A LTR ERVK -196 664 1 2 1261 21 0 0 0 chrX 88662295 88662316 -77987980 + AT_rich Low_complexity Low_complexity 1 21 0 2 1261 1284 270 41 18 chrX 88662352 88662691 -77987605 + ORR1D2 LTR MaLR 1 347 -23 2 1261 267 309 57 85 chrX 88662644 88662750 -77987546 + RMER12 LTR ERVK 729 831 -491 2 1261 263 182 0 0 chrX 88662810 88662854 -77987442 - ID SINE ID -180 44 1 2 1261 753 137 34 0 chrX 88662966 88663083 -77987213 - Lx7 LINE L1 -826 6870 6750 2 1261 841 175 88 21 chrX 88663083 88663276 -77987020 - URR1A DNA MER1_type 0 226 21 2 1261 1133 210 141 39 chrX 88663281 88663652 -77986644 - RLTR26 LTR ERVK -195 447 4 2 1261 867 321 130 23 chrX 88663676 88664849 -77985447 + L1M2 LINE L1 2134 3431 -2712 2 1261 364 351 27 6 chrX 88665069 88665373 -77984923 + L1M2 LINE L1 3823 4119 -2024 2 1261 7692 75 5 0 chrX 88665562 88666886 -77983410 - L1_Mus1 LINE L1 -2 6565 5235 2 1261 1391 143 4 0 chrX 88666883 88667113 -77983183 + L1_Mus1 LINE L1 5008 5238 -645 2 1261 180 0 0 0 chrX 88667230 88667250 -77983046 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1261 667 302 5 10 chrX 88667486 88667690 -77982606 + Lx8 LINE L1 6817 7019 -454 2 1261 267 269 138 28 chrX 88667765 88667910 -77982386 + Lx8 LINE L1 7292 7452 -21 2 1261 510 180 0 0 chrX 88667910 88668010 -77982286 + (TA)n Simple_repeat Simple_repeat 2 101 0 2 1261 417 311 53 66 chrX 88668012 88668576 -77981720 + L1M2 LINE L1 4618 5174 -969 2 1261 441 232 40 22 chrX 88668761 88668913 -77981383 + L1_Rod LINE L1 5359 5542 -338 2 1261 522 287 9 0 chrX 88668944 88669059 -77981237 + RSINE1 SINE B4 14 129 -36 2 1261 7811 180 30 57 chrX 88669229 88669443 -77980853 - L1_Mur3 LINE L1 -1005 4875 4667 2 1261 266 0 29 0 chrX 88669443 88669477 -77980819 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2 1261 7811 180 30 57 chrX 88669477 88670703 -77979593 - L1_Mur3 LINE L1 -1214 4666 3472 2 1261 236 28 0 53 chrX 88670703 88670741 -77979555 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2 1261 7811 180 30 57 chrX 88670741 88670888 -77979408 - L1_Mur3 LINE L1 -2409 3471 3327 2 1261 351 0 0 0 chrX 88670888 88670927 -77979369 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1261 1025 103 0 0 chrX 88670927 88671063 -77979233 - B1_Mus1 SINE Alu -10 138 3 2 1261 7811 180 30 57 chrX 88671063 88671382 -77978914 - L1_Mur3 LINE L1 -2554 3326 3018 2 1261 1464 221 78 13 chrX 88671394 88672209 -77978087 + L1_Mur3 LINE L1 893 1772 -4075 2 1261 330 26 0 0 chrX 88672286 88672325 -77977971 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1261 449 316 151 27 chrX 88672562 88673025 -77977271 - RMER13B LTR ERVK -356 552 30 2 1261 611 269 0 20 chrX 88673072 88673224 -77977072 - L1_Mur3 LINE L1 -7052 676 528 2 1261 240 346 48 18 chrX 88673429 88673594 -77976702 + L1MA4 LINE L1 5856 6025 -275 2 1261 207 0 0 0 chrX 88673603 88673626 -77976670 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 1261 461 127 0 12 chrX 88674095 88674175 -77976121 + (TC)n Simple_repeat Simple_repeat 2 80 0 2 1261 349 262 0 0 chrX 88674371 88674451 -77975845 - 4.5SRNA scRNA scRNA -14 80 1 2 1261 261 200 0 0 chrX 88674469 88674514 -77975782 + Lx7 LINE L1 6904 6948 -748 2 1261 2025 88 30 0 chrX 88674534 88674830 -77975466 + L1_Mus1 LINE L1 6263 6567 0 2 1261 1342 265 25 75 chrX 88674854 88674948 -77975348 + Lx6 LINE L1 7022 7116 -344 2 1261 180 0 0 0 chrX 88674948 88674968 -77975328 + (TG)n Simple_repeat Simple_repeat 2 21 0 2 1261 1342 265 25 75 chrX 88674968 88675273 -77975023 + Lx6 LINE L1 7117 7401 -59 2 1261 1998 96 5 35 chrX 88675357 88675672 -77974624 - L1_Mus3 LINE L1 -550 6088 5805 2 1261 3468 83 14 14 chrX 88675672 88676173 -77974123 + L1_Mus3 LINE L1 6129 6629 -9 2 1261 585 338 25 8 chrX 88676422 88676667 -77973629 - Lx7 LINE L1 -330 7366 7118 2 1261 367 176 59 0 chrX 88676666 88676734 -77973562 + Lx7 LINE L1 7035 7106 -590 2 1261 1842 259 14 26 chrX 88676776 88677267 -77973029 - Lx8 LINE L1 -657 6816 6332 2 1261 1125 275 71 29 chrX 88677273 88677480 -77972816 + Lx9 LINE L1 5355 5563 -284 2 1261 1867 155 16 3 chrX 88677480 88677785 -77972511 + RLTR27 LTR ERVK 1 309 0 2 1261 1125 280 72 32 chrX 88677785 88678130 -77972166 + Lx9 LINE L1 5564 5967 -1677 2 1261 1143 130 222 8 chrX 88679041 88679289 -77971007 + L1Md_F2 LINE L1 6270 6570 -12 2 1261 1607 218 226 8 chrX 88679547 88680075 -77970221 - Lx9 LINE L1 -7 7637 6994 2 1261 26901 134 11 16 chrX 88680334 88686445 -77963851 + L1_Mus2 LINE L1 333 6415 -151 2 1261 835 99 0 0 chrX 88686445 88686566 -77963730 - L1_Mus2 LINE L1 -4 6562 6442 2 1261 22 0 0 0 chrX 88687217 88687239 -77963057 + AT_rich Low_complexity Low_complexity 1 22 0 2 1261 250 339 47 24 chrX 88687607 88687734 -77962562 - B1F SINE Alu -8 141 12 2 1261 355 318 147 21 chrX 88687974 88688250 -77962046 + RMER20B LTR ERVK 168 507 -120 2 1261 3968 211 25 35 chrX 88688439 88689439 -77960857 + Lx5 LINE L1 4309 5298 -582 2 1261 2625 214 39 25 chrX 88689430 88689991 -77960305 - Lx5 LINE L1 -546 6504 5936 2 1261 2355 194 74 24 chrX 88689992 88690493 -77959803 + Lx5 LINE L1 6511 7036 -14 2 1261 366 80 0 0 chrX 88690494 88690544 -77959752 + (TAAA)n Simple_repeat Simple_repeat 4 53 0 2 1261 4304 212 64 31 chrX 88690563 88691190 -77959106 + Lx5 LINE L1 5284 5941 -1109 2 1261 2662 32 181 0 chrX 88691190 88691538 -77958758 - IAPLTR2a LTR ERVK 0 411 1 2 1261 4304 268 40 101 chrX 88691538 88692646 -77957650 + Lx5 LINE L1 5942 6965 -85 2 1261 22 70 0 0 chrX 88692747 88692790 -77957506 + AT_rich Low_complexity Low_complexity 1 43 0 2 1261 31 44 0 0 chrX 88692867 88692912 -77957384 + AT_rich Low_complexity Low_complexity 1 45 0 2 1261 622 193 13 100 chrX 88693040 88693190 -77957106 - ORR1C2 LTR MaLR 0 384 248 2 1261 882 262 109 7 chrX 88693196 88693480 -77956816 + Lx7 LINE L1 6977 7289 -407 2 1261 2819 145 11 20 chrX 88693502 88694014 -77956282 - L1_Mus4 LINE L1 -990 5646 5101 2 1261 814 32 0 0 chrX 88694778 88694871 -77955425 + L1Md_T LINE L1 5494 5586 -297 2 1261 8438 28 1 1 chrX 88694871 88695865 -77954431 + L1Md_T LINE L1 5587 6580 -2 2 1261 3855 49 2 0 chrX 88695889 88696361 -77953935 + L1_Mus1 LINE L1 6095 6567 0 2 1261 1170 128 0 11 chrX 88696380 88696554 -77953742 - Lx4A LINE L1 -452 6606 6435 2 1261 1056 246 45 4 chrX 88696929 88697174 -77953122 + MTC LTR MaLR 1 255 -166 2 1261 588 14 0 0 chrX 88698156 88698225 -77952071 + (CAAG)n Simple_repeat Simple_repeat 2 70 0 2 1261 1260 133 29 5 chrX 88698225 88698429 -77951867 + MTC LTR MaLR 205 413 -8 2 1261 270 179 0 0 chrX 88698516 88698572 -77951724 + CT-rich Low_complexity Low_complexity 1 56 0 2 1261 297 260 27 0 chrX 88698572 88698645 -77951651 - B4 SINE B4 -4 288 214 2 1261 234 148 81 16 chrX 88698780 88698842 -77951454 + Lx3_Mus LINE L1 6936 7001 -8 2 1261 622 303 45 22 chrX 88698953 88699132 -77951164 - B4 SINE B4 -66 226 44 2 1261 292 175 118 64 chrX 88699664 88699774 -77950522 + Lx2B LINE L1 6882 6997 -3 2 1261 8670 70 7 7 chrX 88700003 88701850 -77948446 - L1Md_F2 LINE L1 -9 6573 4729 2 1261 270 108 0 0 chrX 88701846 88701883 -77948413 + L1Md_F3 LINE L1 5618 5654 -930 2 1261 702 296 65 7 chrX 88702157 88702496 -77947800 + L1_Mur3 LINE L1 361 981 -6747 2 1261 2664 186 77 11 chrX 88703076 88703101 -77947195 + L1_Mur3 LINE L1 2036 2059 -3821 2 1261 198 0 0 0 chrX 88703101 88703123 -77947173 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 1261 2664 186 77 11 chrX 88703123 88703717 -77946579 + L1_Mur3 LINE L1 2060 2696 -3184 2 1261 409 337 43 43 chrX 88703719 88703905 -77946391 + Lx6 LINE L1 7154 7339 -121 2 1261 785 53 1 0 chrX 88704498 88704611 -77945685 - B2_Mm2 SINE B2 -65 128 15 2 1261 1377 82 0 15 chrX 88704611 88704808 -77945488 + L1Md_F2 LINE L1 6387 6580 -2 2 1261 471 227 8 8 chrX 88705664 88705784 -77944512 + L1_Mur3 LINE L1 4014 4133 -1747 2 1261 297 0 0 0 chrX 88706441 88706474 -77943822 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 1261 806 300 98 33 chrX 88706526 88707015 -77943281 + Lx9 LINE L1 6954 7622 -22 2 1261 803 117 0 0 chrX 88707222 88707333 -77942963 + Lx2A LINE L1 6248 6358 -650 2 1261 3087 138 21 2 chrX 88707347 88707862 -77942434 + Lx2A LINE L1 6484 7008 0 2 1261 457 374 92 55 chrX 88708392 88708879 -77941417 + L1MCa LINE L1 330 834 -5917 3 1261 313 306 56 8 chrX 88708929 88709054 -77941242 + L1MCa LINE L1 849 979 -5772 3 1261 314 240 40 0 chrX 88709311 88709411 -77940885 + L1MCa LINE L1 1047 1150 -4895 3 1261 240 248 83 58 chrX 88709597 88709717 -77940579 + L1MCa LINE L1 1995 2117 -4634 3 1261 780 293 129 52 chrX 88709786 88710606 -77939690 + L1MCa LINE L1 2561 3443 -3121 3 1261 440 284 7 7 chrX 88710660 88710795 -77939501 - Lx6 LINE L1 -43 7417 7283 3 1261 310 263 108 17 chrX 88710795 88710915 -77939381 + L1MCa LINE L1 3487 3617 -2947 3 1261 521 256 33 0 chrX 88711035 88711156 -77939140 + Lx8 LINE L1 6310 6434 -1039 3 1261 4945 164 34 152 chrX 88711243 88711677 -77938619 - L1_Mur2 LINE L1 -1188 4689 4226 3 1261 1326 91 27 0 chrX 88711677 88711864 -77938432 - B2_Mm2 SINE B2 -2 193 2 3 1261 4945 164 34 152 chrX 88711864 88712788 -77937508 - L1_Mur2 LINE L1 -1652 4225 3491 3 1261 6045 104 18 5 chrX 88712787 88713677 -77936619 + L1Md_F2 LINE L1 4685 5586 -297 3 1261 7148 90 3 4 chrX 88713678 88714670 -77935626 + L1Md_F2 LINE L1 5588 6578 -4 3 1261 5857 88 5 1 chrX 88714671 88715469 -77934827 - L1_Mus1 LINE L1 -10 6557 5757 3 1261 1554 115 4 11 chrX 88715473 88715737 -77934559 + L1_Mm LINE L1 5194 5455 -428 3 1261 447 165 28 27 chrX 88715740 88715833 -77934463 + L1_Mm LINE L1 5174 5266 -620 3 1261 967 110 20 14 chrX 88715833 88715980 -77934316 + B1_Mus1 SINE Alu 1 148 0 3 1261 447 174 27 24 chrX 88715980 88716008 -77934288 + L1_Mm LINE L1 5267 5296 -590 3 1261 242 115 19 0 chrX 88716030 88716082 -77934214 + (CAAAAA)n Simple_repeat Simple_repeat 4 56 0 3 1261 230 65 0 0 chrX 88716082 88716113 -77934183 - L1_Mus3 LINE L1 -817 5821 5791 3 1261 1192 288 28 11 chrX 88716165 88716527 -77933769 + Lx8 LINE L1 6448 6815 -658 3 1261 1511 174 134 24 chrX 88716527 88716863 -77933433 + RMER6C LTR ERVK 1 373 -317 3 1261 284 164 15 0 chrX 88716867 88716934 -77933362 + GA-rich Low_complexity Low_complexity 1 68 0 3 1261 1047 221 40 57 chrX 88716935 88717232 -77933064 + RMER6C LTR ERVK 327 618 -72 3 1261 390 314 78 47 chrX 88717688 88717903 -77932393 - RMER20B LTR ERVK -208 419 226 3 1261 230 269 38 13 chrX 88718047 88718126 -77932170 + CT-rich Low_complexity Low_complexity 1 81 0 3 1261 22 70 0 0 chrX 88718748 88718791 -77931505 + AT_rich Low_complexity Low_complexity 1 43 0 3 1261 386 346 53 60 chrX 88719470 88719773 -77930523 - RLTR25B LTR ERVK -804 299 1 3 1261 225 323 82 75 chrX 88719825 88719959 -77930337 - RMER13A LTR ERVK -725 135 1 3 1261 435 143 13 13 chrX 88719959 88720037 -77930259 + RMER6C LTR ERVK 613 690 0 3 1261 1750 293 37 27 chrX 88720038 88720634 -77929662 + Lx8 LINE L1 6811 7412 -61 3 1261 2092 93 7 10 chrX 88720870 88721174 -77929122 + L1_Mus3 LINE L1 6330 6632 -6 3 1261 527 288 120 24 chrX 88721331 88721623 -77928673 + L1MD LINE L1 5372 5691 -2304 3 1261 3105 24 84 0 chrX 88721709 88722088 -77928208 + IAPLTR2a LTR ERVK 1 411 0 3 1261 250 361 46 9 chrX 88722137 88722246 -77928050 + B3 SINE B2 91 203 -13 3 1261 245 276 94 14 chrX 88722910 88723123 -77927173 + L1M2 LINE L1 5254 5483 -814 3 1261 284 349 85 23 chrX 88723290 88723419 -77926877 + B1F SINE Alu 3 139 -10 3 1261 246 352 46 23 chrX 88723464 88723595 -77926701 + B1F SINE Alu 2 135 -14 3 1261 243 0 0 0 chrX 88723630 88723657 -77926639 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1261 2753 122 9 2 chrX 88727080 88727516 -77922780 - L1_Mus3 LINE L1 -1 6637 6199 3 1261 30 0 0 0 chrX 88727793 88727823 -77922473 + AT_rich Low_complexity Low_complexity 1 30 0 3 1261 7348 12 0 0 chrX 88728402 88729237 -77921059 + L1Md_T LINE L1 4752 5586 -297 3 1261 8367 34 1 0 chrX 88729237 88730232 -77920064 + L1Md_T LINE L1 5587 6582 0 3 1261 219 271 14 14 chrX 88730481 88730552 -77919744 + (CATATA)n Simple_repeat Simple_repeat 3 73 0 3 1261 585 120 0 0 chrX 88730562 88730654 -77919642 + (TA)n Simple_repeat Simple_repeat 1 92 0 3 1261 498 17 0 0 chrX 88730655 88730714 -77919582 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 1261 492 81 0 0 chrX 88731003 88731077 -77919219 + (CA)n Simple_repeat Simple_repeat 1 74 0 3 1261 6425 150 45 97 chrX 88731077 88731768 -77918528 - RLTR21 LTR ERVK -285 1287 669 3 1261 551 155 0 0 chrX 88731768 88731871 -77918425 + Lx3C LINE L1 6871 6973 -3 3 1261 6425 150 45 97 chrX 88731871 88732536 -77917760 - RLTR21 LTR ERVK -904 668 1 3 1261 21 0 0 0 chrX 88733472 88733493 -77916803 + AT_rich Low_complexity Low_complexity 1 21 0 3 1261 28 29 0 0 chrX 88734099 88734134 -77916162 + AT_rich Low_complexity Low_complexity 1 35 0 3 157 32830 75 1 2 chrX 88734583 88739794 -77910502 - L1Md_F2 LINE L1 0 6582 1379 3 1262 3959 145 19 6 chrX 88739809 88740510 -77909786 + MusHAL1 LINE L1 873 1582 -1130 3 1262 198 0 0 0 chrX 88740544 88740566 -77909730 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 1262 932 186 5 1 chrX 88740566 88740773 -77909523 + L1_Mur1 LINE L1 5162 5375 -508 3 1262 3556 108 7 0 chrX 88740760 88741337 -77908959 - Lx3C LINE L1 -1016 5960 5384 3 1262 366 307 190 36 chrX 88741496 88741827 -77908469 + L1M2 LINE L1 2594 2975 -3168 3 1262 265 265 162 0 chrX 88741827 88741895 -77908401 + Lx8 LINE L1 7252 7330 -143 3 1262 285 29 0 0 chrX 88741899 88741933 -77908363 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 3 1262 1319 168 92 7 chrX 88742151 88742433 -77907863 + Lx4A LINE L1 6443 6748 -310 3 1262 495 33 0 0 chrX 88742564 88742625 -77907671 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 1262 598 155 68 0 chrX 88742625 88742728 -77907568 - Lx2B LINE L1 -245 6755 6646 3 1262 21 0 0 0 chrX 88743460 88743481 -77906815 + AT_rich Low_complexity Low_complexity 1 21 0 3 1262 3791 71 0 0 chrX 88743590 88744148 -77906148 - L1_Mus2 LINE L1 -490 6076 5519 3 1262 3269 154 5 9 chrX 88744150 88744708 -77905588 + L1_Mus3 LINE L1 6083 6638 0 3 1262 22 0 0 0 chrX 88744708 88744730 -77905566 + AT_rich Low_complexity Low_complexity 1 22 0 3 1262 490 320 86 5 chrX 88744831 88745041 -77905255 - MLT1B LTR MaLR -2 388 162 3 1262 378 366 128 21 chrX 88745910 88746200 -77904096 - MLT1A0 LTR MaLR -13 352 32 3 1262 664 249 39 34 chrX 88746348 88746552 -77903744 + L1_Rod LINE L1 5558 5762 -85 3 1262 808 236 35 10 chrX 88746557 88746754 -77903542 + B3 SINE B2 4 205 -11 3 1262 400 250 206 25 chrX 88746786 88746946 -77903350 + Lx4B LINE L1 6812 7050 -8 3 1262 243 276 68 17 chrX 88746929 88747047 -77903249 + Lx7 LINE L1 5779 5902 -1794 3 1262 38 61 0 0 chrX 88747442 88747508 -77902788 + AT_rich Low_complexity Low_complexity 1 66 0 3 1262 2273 78 119 11 chrX 88747791 88748143 -77902153 + RLTR10 LTR ERVK 1 390 0 3 1262 13681 24 4 1 chrX 88748143 88749894 -77900402 + RLTR10-int LTR ERVK 302 1984 -3 3 1262 2299 69 119 11 chrX 88749896 88750248 -77900048 + RLTR10 LTR ERVK 1 390 0 3 1262 493 145 15 0 chrX 88750533 88750626 -77899670 + B1_Mus2 SINE Alu 21 120 0 3 1262 315 0 0 0 chrX 88750626 88750661 -77899635 + (A)n Simple_repeat Simple_repeat 1 35 0 3 1262 540 45 0 0 chrX 88751329 88751396 -77898900 + (TG)n Simple_repeat Simple_repeat 1 67 0 3 1262 3368 67 27 5 chrX 88751808 88752255 -77898041 - L1Md_F2 LINE L1 -1 6581 6125 3 1262 9078 61 0 0 chrX 88752262 88753418 -77896878 + L1Md_F3 LINE L1 4432 5587 -296 3 1262 8042 41 3 6 chrX 88753419 88754416 -77895880 + L1Md_F3 LINE L1 5589 6582 -2 3 1262 27 0 0 0 chrX 88754416 88754443 -77895853 + AT_rich Low_complexity Low_complexity 1 27 0 3 1262 726 201 165 0 chrX 88754459 88754623 -77895673 + L1_Mur3 LINE L1 5383 5573 -307 3 1262 929 201 33 46 chrX 88754635 88754875 -77895421 + Lx7 LINE L1 7460 7696 0 3 1262 378 0 0 0 chrX 88755269 88755311 -77894985 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1262 225 0 0 0 chrX 88755311 88755335 -77894961 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1262 414 345 62 31 chrX 88755876 88756133 -77894163 - RMER13A LTR ERVK -95 765 501 3 1262 448 305 61 0 chrX 88756266 88756397 -77893899 + B1_Mur2 SINE Alu 9 147 -2 3 1262 390 381 53 20 chrX 88756451 88756601 -77893695 + RSINE1 SINE B4 11 165 0 3 1262 357 24 0 0 chrX 88757304 88757346 -77892950 + (GGGAA)n Simple_repeat Simple_repeat 5 46 0 3 1262 3752 152 35 15 chrX 88757440 88758524 -77891772 + L1_Mus1 LINE L1 415 1528 -4355 3 1262 974 140 6 0 chrX 88758531 88758695 -77891601 + MusHAL1 LINE L1 1720 1884 -828 3 1262 579 39 0 0 chrX 88758689 88758767 -77891529 + MusHAL1 LINE L1 331 408 -2304 3 1262 21925 116 11 3 chrX 88758758 88762936 -77887360 + L1_Mus1 LINE L1 2355 6566 -1 3 1262 1497 219 93 19 chrX 88763191 88763568 -77886728 + Lx5 LINE L1 6638 7042 -8 3 1262 595 310 34 103 chrX 88763794 88764261 -77886035 - RLTR17 LTR ERVK -133 559 125 3 1262 5228 162 15 0 chrX 88765277 88766136 -77884160 - Lx2B LINE L1 -187 6813 5942 3 1262 320 86 20 206 chrX 88766138 88766240 -77884056 - L1_Mur1 LINE L1 -2556 3330 3243 3 1262 4058 133 3 0 chrX 88766235 88766868 -77883428 - L1_Mm LINE L1 -229 5654 5020 3 1262 4835 123 6 32 chrX 88766868 88767657 -77882639 + L1_Mm LINE L1 4239 5007 -876 3 1262 313 337 86 60 chrX 88768331 88768751 -77881545 + L1MEg LINE L1 1058 1488 -4596 3 1262 309 352 115 24 chrX 88768841 88769382 -77880914 + L1_Mur3 LINE L1 2139 2728 -3415 3 1262 485 272 22 8 chrX 88769426 88769595 -77880701 + L1_Mur3 LINE L1 5129 5327 -813 3 1262 29246 101 14 19 chrX 88769618 88774825 -77875471 + L1Md_F2 LINE L1 404 5585 -298 3 1262 6606 92 18 42 chrX 88774826 88775837 -77874459 + L1Md_F2 LINE L1 5587 6573 -9 3 1262 876 270 144 9 chrX 88775839 88775930 -77874366 + L1_Mur3 LINE L1 5356 5463 -417 3 1262 255 31 0 0 chrX 88775930 88775962 -77874334 + (CAA)n Simple_repeat Simple_repeat 1 32 0 3 1262 876 270 144 9 chrX 88775962 88776203 -77874093 + L1_Mur3 LINE L1 5464 5732 -148 3 1262 729 304 174 10 chrX 88776233 88776530 -77873766 - MTD LTR MaLR -30 389 44 3 1262 620 319 109 65 chrX 88776530 88776739 -77873557 - RMER15 LTR ERVL 0 575 385 3 1262 477 0 0 0 chrX 88776739 88776792 -77873504 + (TC)n Simple_repeat Simple_repeat 1 53 0 3 1262 843 29 0 0 chrX 88776792 88776893 -77873403 + (CA)n Simple_repeat Simple_repeat 1 102 0 3 1262 620 319 109 65 chrX 88776893 88777021 -77873275 - RMER15 LTR ERVL -191 384 223 3 1262 513 0 0 0 chrX 88777265 88777322 -77872974 + (TA)n Simple_repeat Simple_repeat 2 58 0 3 1262 704 330 63 45 chrX 88777332 88778047 -77872249 + L1M3 LINE L1 3355 4082 -2058 3 1262 945 248 22 53 chrX 88778063 88778382 -77871914 + Lx7 LINE L1 7004 7312 -384 3 1262 245 156 12 38 chrX 88778618 88778698 -77871598 + Lx7 LINE L1 7602 7679 -17 3 1262 4151 70 7 0 chrX 88778816 88779357 -77870939 + L1_Mus1 LINE L1 6015 6559 -8 3 1262 27828 95 5 5 chrX 88779376 88784131 -77866165 + L1Md_F2 LINE L1 446 5193 -690 3 1262 682 84 11 0 chrX 88784131 88784226 -77866070 + L1Md_F2 LINE L1 5491 5586 -297 3 1262 6949 70 64 0 chrX 88784227 88785161 -77865135 + L1Md_F2 LINE L1 5588 6581 -1 3 1262 21 36 0 0 chrX 88785551 88785579 -77864717 + AT_rich Low_complexity Low_complexity 1 28 0 3 1262 748 244 21 21 chrX 88786071 88786306 -77863990 - Lx2B LINE L1 -5 6995 6761 3 1262 3120 138 17 5 chrX 88786345 88786926 -77863370 + L1_Mur2 LINE L1 4240 4827 -1050 4 1262 798 247 76 0 chrX 88787214 88787437 -77862859 + Lx5 LINE L1 6809 7048 -2 4 1262 444 231 11 11 chrX 88787597 88787689 -77862607 - B3 SINE B2 -98 118 27 4 1262 2511 124 3 3 chrX 88787728 88788108 -77862188 - L1_Mus2 LINE L1 -2 6564 6185 4 1262 557 187 8 16 chrX 88788842 88788967 -77861329 + Lx2 LINE L1 6873 6996 -1 4 1262 5204 48 0 0 chrX 88790899 88791528 -77858768 - L1Md_T LINE L1 -1 6581 5953 4 1262 1079 73 0 7 chrX 88793234 88793385 -77856911 + (TTC)n Simple_repeat Simple_repeat 1 150 0 4 1262 1073 185 120 10 chrX 88793551 88793851 -77856445 - Lx7 LINE L1 0 7696 7364 4 1262 630 65 0 0 chrX 88793853 88793945 -77856351 + (TG)n Simple_repeat Simple_repeat 2 93 0 4 1262 1023 115 0 7 chrX 88794152 88794301 -77855995 - B1_Mus1 SINE Alu 0 148 1 4 1262 255 287 51 23 chrX 88794314 88794455 -77855841 + L1MCb LINE L1 867 987 -5764 4 1262 377 297 96 12 chrX 88794477 88794644 -77855652 + L1MCb LINE L1 768 948 -5097 4 1262 282 315 10 0 chrX 88794672 88794811 -77855485 + L1MCb LINE L1 1010 1236 -5515 4 1262 283 277 146 16 chrX 88794851 88795097 -77855199 + L1MCb LINE L1 1834 2111 -4640 4 1262 205 179 0 0 chrX 88796696 88796735 -77853561 + A-rich Low_complexity Low_complexity 2 40 0 4 1262 294 329 34 15 chrX 88796749 88797011 -77853285 + L1MCb LINE L1 2536 2802 -3762 4 1262 513 240 50 0 chrX 88797109 88797230 -77853066 + ETnERV2-int LTR ERVK 7070 7196 -210 4 1262 622 231 127 0 chrX 88797613 88797747 -77852549 + B3 SINE B2 10 160 -56 4 1262 3609 102 18 2 chrX 88797747 88798297 -77851999 + Lx2 LINE L1 6073 6631 -366 4 1262 1120 145 35 48 chrX 88798297 88798528 -77851768 + Lx2 LINE L1 6770 6997 0 4 1262 325 315 86 22 chrX 88798600 88799064 -77851232 + L1MCb LINE L1 2935 3428 -3136 4 1262 423 229 0 0 chrX 88799341 88799424 -77850872 - B4 SINE B4 -208 84 2 4 1262 1976 227 17 22 chrX 88799624 88800034 -77850262 - MTD LTR MaLR -2 417 10 4 1262 1542 194 149 0 chrX 88800036 88800516 -77849780 + Lx9 LINE L1 7086 7637 -7 4 1262 374 254 23 23 chrX 88800577 88800706 -77849590 + Lx9 LINE L1 6303 6431 -1213 4 1262 935 233 45 0 chrX 88801058 88801281 -77849015 + Lx9 LINE L1 6434 6666 -978 4 1262 949 210 98 14 chrX 88801283 88801578 -77848718 + Lx9 LINE L1 7317 7636 -8 4 1262 426 273 14 0 chrX 88801575 88801714 -77848582 + L1MC2 LINE L1 5820 5960 -384 4 1262 1030 321 61 39 chrX 88801725 88802311 -77847985 + Lx8 LINE L1 6872 7470 -3 4 1262 549 369 64 39 chrX 88805088 88805370 -77844926 - B4A SINE B4 -1 291 3 4 1262 180 0 0 0 chrX 88805393 88805413 -77844883 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 1262 735 205 39 13 chrX 88805422 88805575 -77844721 - RMER10B LTR ERVL -54 344 188 4 1262 5835 159 11 2 chrX 88805855 88806882 -77843414 + Lx LINE L1 5612 6647 -7 4 1262 23 68 0 0 chrX 88806956 88807000 -77843296 + AT_rich Low_complexity Low_complexity 1 44 0 4 1262 988 152 11 6 chrX 88807647 88807826 -77842470 - L1_Mus4 LINE L1 -1 6635 6456 4 1262 21 36 0 0 chrX 88807871 88807899 -77842397 + AT_rich Low_complexity Low_complexity 1 28 0 4 1262 245 154 0 0 chrX 88807981 88808020 -77842276 - B3A SINE B2 -159 39 1 4 1262 1568 143 0 33 chrX 88808518 88808793 -77841503 - RLTR19-int LTR ERVK -1324 4813 4548 4 1262 2707 15 3 0 chrX 88808807 88809134 -77841162 + L1Md_A LINE L1 5618 5945 -637 4 1262 7099 176 23 28 chrX 88809153 88811544 -77838752 - Lx3C LINE L1 -135 6841 4471 4 1262 508 250 124 42 chrX 88811582 88811844 -77838452 - L1MC5 LINE L1 -1026 7016 6654 4 1262 229 330 45 0 chrX 88812269 88812381 -77837915 + Kanga2_a DNA Tc2 365 481 -407 4 1262 327 298 24 24 chrX 88812967 88813094 -77837202 + Lx8 LINE L1 7157 7283 -190 4 1262 8105 26 0 0 chrX 88813109 88814305 -77835991 - L1Md_T LINE L1 0 6582 5387 4 1262 816 75 0 0 chrX 88814358 88814464 -77835832 + B1_Mm SINE Alu 32 137 -10 4 1262 290 26 0 25 chrX 88814464 88814504 -77835792 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1262 26 64 0 0 chrX 88814714 88814761 -77835535 + AT_rich Low_complexity Low_complexity 1 47 0 4 1262 1042 200 51 0 chrX 88814777 88814972 -77835324 + B3 SINE B2 2 206 -10 4 1262 28 48 0 0 chrX 88815122 88815164 -77835132 + AT_rich Low_complexity Low_complexity 1 42 0 4 1262 563 279 71 0 chrX 88815268 88815422 -77834874 + B3A SINE B2 3 167 -31 4 1262 232 303 172 0 chrX 88815474 88815573 -77834723 + PB1D10 SINE Alu 1 116 -1 4 1262 309 300 20 82 chrX 88815691 88815789 -77834507 + PB1 SINE Alu 6 97 -30 4 1262 230 323 21 0 chrX 88815891 88815984 -77834312 + Lx8 LINE L1 7152 7246 -227 4 1262 674 211 0 22 chrX 88815998 88816134 -77834162 + B1_Mur2 SINE Alu 17 149 0 4 1262 265 296 56 0 chrX 88816142 88816213 -77834083 + ID4 SINE ID 9 83 0 4 1262 356 222 11 22 chrX 88816230 88816322 -77833974 - Charlie2b DNA MER1_type -887 1895 1805 4 1262 694 194 13 0 chrX 88816532 88816687 -77833609 - L1_Mur2 LINE L1 -521 5356 5200 4 1262 1471 143 8 0 chrX 88816688 88816954 -77833342 - L1_Mur2 LINE L1 -849 5028 4761 4 1262 211 54 54 0 chrX 88816957 88816994 -77833302 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 4 1262 3165 61 5 0 chrX 88817274 88817668 -77832628 + MTA_Mm LTR MaLR 1 396 0 4 1262 490 225 71 9 chrX 88817742 88817854 -77832442 - MTD LTR MaLR -21 398 280 4 1262 1380 229 31 84 chrX 88817861 88818242 -77832054 + MTD LTR MaLR 51 411 -8 4 1262 311 330 37 60 chrX 88818423 88818467 -77831829 + L1MD2 LINE L1 5729 5768 -591 4 1262 522 243 18 0 chrX 88818467 88818578 -77831718 + PB1D10 SINE Alu 5 117 0 4 1262 311 330 37 60 chrX 88818578 88818749 -77831547 + L1MD2 LINE L1 5769 5939 -420 4 1262 439 245 225 31 chrX 88819397 88819557 -77830739 - ID_B1 SINE B4 -2 222 32 4 1262 273 281 47 0 chrX 88819506 88819570 -77830726 - ID4 SINE ID -2 81 15 4 1262 340 40 20 20 chrX 88819649 88819700 -77830596 + L1_Mus2 LINE L1 6335 6385 -181 4 1262 1374 112 10 0 chrX 88819700 88819905 -77830391 + L1_Mus2 LINE L1 6359 6565 -1 4 1262 223 318 213 13 chrX 88820071 88820221 -77830075 + B4A SINE B4 2 181 -111 4 1262 2772 225 99 34 chrX 88821790 88822638 -77827658 - Lx2B LINE L1 -2 6998 6096 4 1262 552 202 28 102 chrX 88822639 88822815 -77827481 + ORR1A2 LTR MaLR 1 163 -164 4 1262 2097 128 3 7 chrX 88822678 88822985 -77827311 - MT2B LTR ERVL -294 307 2 4 1262 2534 174 3 4 chrX 88823001 88823500 -77826796 - Lx2B LINE L1 -937 6063 5587 4 1262 2824 212 39 42 chrX 88823500 88824410 -77825886 - RMER3D-int LTR ERVK -11 2831 1925 4 1262 550 187 49 55 chrX 88824411 88824575 -77825721 - RMER3D-int LTR ERVK -1148 1694 1532 4 1262 1225 188 168 17 chrX 88824607 88825074 -77825222 - RMER3D-int LTR ERVK -1309 1533 1015 4 1262 900 135 6 17 chrX 88825111 88825284 -77825012 + C-rich Low_complexity Low_complexity 1 171 0 4 1262 509 148 0 58 chrX 88825293 88825465 -77824831 + CT-rich Low_complexity Low_complexity 1 162 0 4 1262 456 19 0 0 chrX 88825518 88825571 -77824725 + (TCTCC)n Simple_repeat Simple_repeat 1 53 0 4 1262 1104 39 0 58 chrX 88825573 88825762 -77824534 + (TTTCC)n Simple_repeat Simple_repeat 1 178 0 4 1262 570 219 95 27 chrX 88825764 88826055 -77824241 - RMER3D-int LTR ERVK -2012 830 331 4 1262 277 79 0 0 chrX 88826091 88826129 -77824167 + L1Md_F2 LINE L1 5549 5586 -297 4 1262 7551 68 2 7 chrX 88826130 88827130 -77823166 + L1Md_F2 LINE L1 5588 6582 0 4 1262 400 14 42 28 chrX 88827151 88827222 -77823074 + (CAAAA)n Simple_repeat Simple_repeat 2 73 0 4 1262 336 159 72 0 chrX 88827224 88827293 -77823003 - RMER3D-int LTR ERVK -2280 562 489 4 1262 819 103 50 22 chrX 88827704 88827843 -77822453 - BGLII LTR ERVK 0 421 279 4 1262 22124 111 21 15 chrX 88827843 88831593 -77818703 - L1_Mur1 LINE L1 -77 5809 2036 4 1262 1022 103 7 7 chrX 88831609 88831756 -77818540 - B1_Mus1 SINE Alu 0 148 2 4 1262 886 91 328 0 chrX 88831763 88831968 -77818328 - L1_Mus1 LINE L1 -1 6635 6283 4 1262 13849 106 23 3 chrX 88831970 88834161 -77816135 - L1_Mur1 LINE L1 -1619 4267 2036 4 1262 1013 103 7 7 chrX 88834178 88834325 -77815971 - B1_Mus1 SINE Alu 0 148 2 4 1262 956 100 425 0 chrX 88834335 88834535 -77815761 - L1_Mus1 LINE L1 0 6567 6283 4 1262 14081 108 21 3 chrX 88834537 88836728 -77813568 - L1_Mur1 LINE L1 -1619 4267 2036 4 1262 1013 103 7 7 chrX 88836745 88836892 -77813404 - B1_Mus1 SINE Alu 0 148 2 4 1262 956 100 425 0 chrX 88836902 88837102 -77813194 - L1_Mus1 LINE L1 0 6567 6283 4 1262 14081 108 21 3 chrX 88837104 88839295 -77811001 - L1_Mur1 LINE L1 -1619 4267 2036 4 1262 362 103 27 118 chrX 88839299 88839311 -77810985 - L1_Mus1 LINE L1 0 6584 6575 4 1262 1013 103 7 7 chrX 88839311 88839458 -77810838 - B1_Mus1 SINE Alu 0 148 2 4 1262 956 100 406 6 chrX 88839458 88839668 -77810628 - L1_Mus1 LINE L1 -10 6574 6283 4 1262 14081 108 21 3 chrX 88839670 88841861 -77808435 - L1_Mur1 LINE L1 -1619 4267 2036 4 1262 1013 103 7 7 chrX 88841878 88842025 -77808271 - B1_Mus1 SINE Alu 0 148 2 4 1262 970 95 425 0 chrX 88842035 88842235 -77808061 - L1_Mus1 LINE L1 0 6567 6283 4 1262 14069 109 21 3 chrX 88842237 88844428 -77805868 - L1_Mur1 LINE L1 -1619 4267 2036 4 1262 1026 96 7 7 chrX 88844444 88844591 -77805705 - B1_Mus1 SINE Alu 0 148 2 4 1262 5790 104 107 1 chrX 88844604 88846160 -77804136 - L1_Mus1 LINE L1 0 6566 4865 4 1262 1789 202 32 78 chrX 88846163 88846888 -77803408 - L1_Mur1 LINE L1 -6006 978 3 4 1262 2078 254 19 36 chrX 88846891 88847466 -77802830 - L1_Mur3 LINE L1 -153 5727 5163 4 1262 1898 70 0 0 chrX 88848029 88848273 -77802023 + L1Md_F3 LINE L1 5342 5585 -298 4 1262 5277 123 48 54 chrX 88848274 88849276 -77801020 + L1Md_F3 LINE L1 5587 6582 -2 4 1262 441 0 0 0 chrX 88849609 88849658 -77800638 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 1262 185 0 40 0 chrX 88849753 88849778 -77800518 + (TTTTA)n Simple_repeat Simple_repeat 4 29 0 4 1262 3512 101 2 0 chrX 88849781 88850264 -77800032 - L1Md_F2 LINE L1 -25 6557 6074 4 1262 2153 96 55 3 chrX 88850263 88850608 -77799688 - MusHAL1 LINE L1 -11 2701 2339 4 1262 301 122 0 0 chrX 88850608 88850657 -77799639 - MusHAL1 LINE L1 -483 2229 2181 4 1262 3788 36 0 0 chrX 88850868 88851318 -77798978 - L1Md_F3 LINE L1 -373 6211 5762 4 1262 2752 45 8 3 chrX 88851318 88851673 -77798623 + L1Md_F3 LINE L1 6226 6582 -2 4 1262 23 86 0 0 chrX 88851673 88851731 -77798565 + AT_rich Low_complexity Low_complexity 1 58 0 4 1262 1268 124 0 19 chrX 88851992 88852197 -77798099 - L1Md_F2 LINE L1 -12 6570 6370 4 1262 10015 82 21 6 chrX 88852197 88853705 -77796591 - L1Md_F2 LINE L1 -612 5970 4430 4 1262 186 43 0 0 chrX 88853856 88853879 -77796417 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1262 1114 76 19 0 chrX 88853906 88854064 -77796232 - L1Md_F3 LINE L1 -1 6583 6423 5 1262 35301 36 0 0 chrX 88854065 88859297 -77790999 + L1Md_T LINE L1 260 5588 -298 5 1262 8964 6 0 0 chrX 88859298 88860294 -77790002 + L1Md_T LINE L1 5590 6585 0 5 1262 324 0 0 0 chrX 88860294 88860330 -77789966 - L1Md_F3 LINE L1 -147 6437 6402 5 1262 415 52 0 17 chrX 88860337 88860396 -77789900 - L1Md_F LINE L1 -6352 167 110 5 1262 609 143 154 3 chrX 88860394 88860532 -77789764 + L1_Mus2 LINE L1 6431 6584 0 5 1262 722 92 32 13 chrX 88860582 88860736 -77789560 + (TA)n Simple_repeat Simple_repeat 2 158 0 5 1262 299 366 35 9 chrX 88860747 88860860 -77789436 - B1_Mur1 SINE Alu -33 116 1 5 1262 413 347 122 17 chrX 88861025 88861795 -77788501 + L1MCa LINE L1 2052 2904 -3417 5 1262 719 295 74 65 chrX 88861821 88862275 -77788021 + MTE2a LTR MaLR 2 407 -14 5 1262 600 274 118 50 chrX 88862292 88862525 -77787771 + L1MCa LINE L1 2946 3193 -3128 5 1262 387 0 0 0 chrX 88862525 88862568 -77787728 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1262 279 0 0 0 chrX 88862568 88862598 -77787698 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 1262 600 274 118 50 chrX 88862598 88862743 -77787553 + L1MCa LINE L1 3194 3350 -2971 5 1262 280 216 27 0 chrX 88862883 88862957 -77787339 + L1M4 LINE L1 3341 3416 -2730 5 1262 280 250 124 7 chrX 88863121 88863258 -77787038 + L1MCa LINE L1 5553 5705 -814 5 1262 1907 185 20 20 chrX 88863402 88863749 -77786547 + MTC LTR MaLR 66 412 -9 5 1262 264 298 74 11 chrX 88864371 88864466 -77785830 + B1F2 SINE Alu 44 144 -5 5 1262 806 194 21 32 chrX 88864543 88864729 -77785567 + Lx9 LINE L1 7275 7458 -186 5 1262 286 159 16 0 chrX 88864741 88864804 -77785492 + Lx9 LINE L1 7558 7621 -23 5 1262 1211 120 0 0 chrX 88865267 88865451 -77784845 + L1_Mus1 LINE L1 6384 6567 0 5 1262 240 323 113 0 chrX 88866091 88866224 -77784072 + L1M2 LINE L1 4846 4993 -1150 5 1262 459 0 0 0 chrX 88866461 88866512 -77783784 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 157 237 281 67 42 chrX 88866780 88866899 -77783397 + L1M2 LINE L1 5528 5649 -651 5 1263 207 69 0 0 chrX 88867007 88867036 -77783260 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1263 277 292 119 28 chrX 88867156 88867332 -77782964 + L1MB8 LINE L1 5848 6039 -139 5 1263 227 263 66 0 chrX 88867707 88867783 -77782513 + Lx8 LINE L1 7385 7465 -8 5 1263 21 57 0 0 chrX 88868007 88868042 -77782254 + AT_rich Low_complexity Low_complexity 1 35 0 5 1263 1206 41 0 0 chrX 88868042 88868189 -77782107 - B1_Mus2 SINE Alu 0 147 1 5 1263 389 328 67 0 chrX 88868848 88868982 -77781314 + B1F SINE Alu 7 149 0 5 1263 434 0 0 0 chrX 88870298 88870350 -77779946 + L1_Mus2 LINE L1 6513 6564 -2 5 1263 248 250 96 0 chrX 88872192 88872296 -77778000 + Lx5 LINE L1 5254 5367 -513 5 1263 2827 264 49 58 chrX 88872296 88873067 -77777229 + Lx5 LINE L1 5984 6726 -324 5 1263 414 0 0 0 chrX 88873067 88873113 -77777183 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1263 2827 293 35 82 chrX 88873113 88873399 -77776897 + Lx5 LINE L1 6727 7027 -23 5 1263 596 273 52 21 chrX 88873419 88873790 -77776506 + Lx8 LINE L1 5352 5743 -1953 5 1263 774 140 7 40 chrX 88873792 88873941 -77776355 + Lx3B LINE L1 6828 6971 -2 5 1263 29 0 0 0 chrX 88873956 88873985 -77776311 + AT_rich Low_complexity Low_complexity 1 29 0 5 1263 2709 291 74 46 chrX 88874011 88874443 -77775853 + Lx8 LINE L1 5727 6171 -1302 5 1263 821 124 0 6 chrX 88874443 88874605 -77775691 + (TA)n Simple_repeat Simple_repeat 1 161 0 5 1263 2709 307 80 32 chrX 88874605 88875487 -77774809 + Lx8 LINE L1 6172 7095 -378 5 1263 204 88 0 56 chrX 88876237 88876273 -77774023 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 5 1263 221 350 17 0 chrX 88876295 88876355 -77773941 + B1F SINE Alu 43 103 -46 5 1263 264 126 53 26 chrX 88876551 88876665 -77773631 + (TCTA)n Simple_repeat Simple_repeat 4 120 0 5 1263 4978 227 60 38 chrX 88878140 88879433 -77770863 + RMER12 LTR ERVK 1 1322 0 5 1263 27 29 0 0 chrX 88881040 88881074 -77769222 + AT_rich Low_complexity Low_complexity 1 34 0 5 1263 26 30 0 0 chrX 88881116 88881149 -77769147 + AT_rich Low_complexity Low_complexity 1 33 0 5 1263 6780 80 5 6 chrX 88881159 88882078 -77768218 - L1_Mus2 LINE L1 -4 6562 5609 5 1263 2044 196 34 93 chrX 88882082 88882617 -77767679 - RLTR19C LTR ERVK -3 503 1 5 1263 2209 215 80 114 chrX 88882617 88883327 -77766969 - RLTR19-int LTR ERVK -1 6136 5451 5 1263 11071 197 44 45 chrX 88883311 88886102 -77764194 - RLTR19-int LTR ERVK -1088 5049 2264 5 1263 4822 93 4 57 chrX 88886138 88886880 -77763416 + L1_Mus3 LINE L1 5936 6638 0 5 1263 708 134 37 15 chrX 88886916 88887052 -77763244 - Lx LINE L1 -38 6616 6478 5 1263 4025 117 8 2 chrX 88887045 88887684 -77762612 - Lx LINE L1 -464 6190 5548 5 1263 5207 155 99 49 chrX 88887689 88888394 -77761902 - RLTR19-int LTR ERVK -3870 2267 1537 5 1263 1862 118 112 86 chrX 88888394 88888857 -77761439 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1263 5207 155 99 49 chrX 88888857 88889469 -77760827 - RLTR19-int LTR ERVK -4601 1536 885 5 1263 6419 192 32 47 chrX 88889469 88890690 -77759606 - Lx2B LINE L1 0 7000 5797 5 1263 4144 177 93 15 chrX 88890690 88891066 -77759230 + RMER17B LTR ERVK 1 398 -560 5 1263 714 94 0 0 chrX 88891066 88891183 -77759113 + (TC)n Simple_repeat Simple_repeat 2 118 0 5 1263 4144 177 93 15 chrX 88891183 88891691 -77758605 + RMER17B LTR ERVK 399 953 -5 5 1263 6419 172 14 33 chrX 88891691 88892577 -77757719 - Lx2B LINE L1 -1204 5796 4923 5 1263 3161 190 26 9 chrX 88892578 88893242 -77757054 + L1_Mur2 LINE L1 4637 5311 -566 5 1263 495 181 14 31 chrX 88893267 88893427 -77756869 + RLTR11A LTR ERVK 12 198 -330 5 1263 275 157 132 22 chrX 88893461 88893552 -77756744 + L1_Mus3 LINE L1 6538 6638 0 5 1263 930 147 0 0 chrX 88893555 88893712 -77756584 + (CATATA)n Simple_repeat Simple_repeat 3 159 0 5 1263 325 37 18 36 chrX 88893874 88893930 -77756366 + (TTATA)n Simple_repeat Simple_repeat 2 56 0 5 1263 23 33 0 0 chrX 88894852 88894882 -77755414 + AT_rich Low_complexity Low_complexity 1 30 0 5 1263 448 254 8 83 chrX 88895271 88895404 -77754892 + B1_Mur2 SINE Alu 6 128 -21 5 1263 459 0 0 0 chrX 88895410 88895461 -77754835 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1263 1873 87 45 0 chrX 88895636 88895901 -77754395 + L1_Mus1 LINE L1 6290 6566 -1 5 1263 240 184 0 0 chrX 88896153 88896202 -77754094 + (TTA)n Simple_repeat Simple_repeat 1 49 0 5 1263 525 226 51 7 chrX 88897309 88897447 -77752849 - Lx7 LINE L1 -21 7675 7532 5 1263 24 53 0 0 chrX 88898114 88898152 -77752144 + AT_rich Low_complexity Low_complexity 1 38 0 5 1263 239 266 0 21 chrX 88899076 88899172 -77751124 + T-rich Low_complexity Low_complexity 3 96 0 5 1263 236 309 0 12 chrX 88899394 88899476 -77750820 + CT-rich Low_complexity Low_complexity 4 84 0 5 1263 24 0 0 29 chrX 88900051 88900072 -77750224 + AT_rich Low_complexity Low_complexity 1 21 0 5 1263 231 36 0 0 chrX 88900072 88900100 -77750196 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1263 24 0 0 29 chrX 88900100 88900113 -77750183 + AT_rich Low_complexity Low_complexity 1 13 0 5 1263 204 138 68 8 chrX 88900246 88900363 -77749933 + (TA)n Simple_repeat Simple_repeat 2 125 0 5 1263 691 264 35 1 chrX 88900470 88900661 -77749635 - B3 SINE B2 -1 197 3 5 1263 504 310 80 28 chrX 88900661 88900825 -77749471 - B4 SINE B4 -60 232 60 5 1263 277 264 0 26 chrX 88901300 88901413 -77748883 - Lx9 LINE L1 -6 7638 7529 5 1263 457 320 83 77 chrX 88902148 88902510 -77747786 - MER67D LTR ERV1 -150 364 1 5 1263 1332 119 25 0 chrX 88903252 88903453 -77746843 + L1_Mus1 LINE L1 6359 6564 -3 5 1263 259 75 36 36 chrX 88903593 88903648 -77746648 + (CAGAGA)n Simple_repeat Simple_repeat 4 58 0 5 1263 378 364 17 28 chrX 88903706 88903884 -77746412 - MER63A DNA AcHobo -6 204 29 5 1263 331 312 32 11 chrX 88904032 88904126 -77746170 + RSINE1 SINE B4 40 135 -30 5 1263 369 62 0 0 chrX 88904132 88904180 -77746116 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 5 1263 22 0 0 0 chrX 88904453 88904475 -77745821 + AT_rich Low_complexity Low_complexity 1 22 0 5 1263 22 0 0 0 chrX 88905481 88905503 -77744793 + AT_rich Low_complexity Low_complexity 1 22 0 5 1263 23 0 0 0 chrX 88905520 88905543 -77744753 + AT_rich Low_complexity Low_complexity 1 23 0 5 1263 1363 254 189 99 chrX 88906259 88906935 -77743361 + RMER19A LTR ERVK 1 737 0 5 1263 488 281 124 0 chrX 88907137 88907315 -77742981 - Lx6 LINE L1 -4 7456 7257 5 1263 2064 242 28 99 chrX 88907315 88907952 -77742344 - RMER19C LTR ERVK -19 592 1 5 1263 758 311 60 62 chrX 88907977 88908347 -77741949 - Lx5 LINE L1 -200 6850 6482 5 1263 558 304 30 25 chrX 88908367 88908576 -77741720 - Lx5 LINE L1 -719 6331 6095 5 1263 1348 92 0 0 chrX 88908621 88908805 -77741491 - Lx3A LINE L1 -684 6297 6114 5 1263 504 0 0 0 chrX 88908806 88908862 -77741434 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 1263 26 30 0 0 chrX 88909251 88909284 -77741012 + AT_rich Low_complexity Low_complexity 1 33 0 5 1263 243 0 0 0 chrX 88909289 88909316 -77740980 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 1263 236 53 0 26 chrX 88909554 88909593 -77740703 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 5 1263 5254 110 0 1 chrX 88909599 88910348 -77739948 - L1_Mus1 LINE L1 -1 6566 5819 5 1263 2536 114 23 5 chrX 88910342 88910731 -77739565 + L1_Mus3 LINE L1 6231 6626 -12 5 1263 456 19 0 0 chrX 88910732 88910785 -77739511 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 5 1263 288 370 139 84 chrX 88910987 88911261 -77739035 + B4 SINE B4 4 292 0 5 1263 2064 216 28 46 chrX 88911468 88912122 -77738174 - Lx4B LINE L1 -4 7054 6306 5 1263 1309 261 10 28 chrX 88912126 88912517 -77737779 + Lx4B LINE L1 5916 6299 -759 5 1263 330 310 132 26 chrX 88912914 88913179 -77737117 + L1ME1 LINE L1 5581 5873 -306 5 1263 28781 96 10 7 chrX 88913560 88914432 -77735864 + L1Md_F2 LINE L1 1080 1977 -3906 5 1263 394 18 36 0 chrX 88914432 88914487 -77735809 + (CAAAA)n Simple_repeat Simple_repeat 2 58 0 5 1263 28781 101 11 9 chrX 88914487 88918089 -77732207 + L1Md_F2 LINE L1 1978 5562 -321 5 1263 5544 111 10 6 chrX 88918089 88918912 -77731384 + L1Md_F2 LINE L1 5738 6563 -19 5 1263 252 167 0 0 chrX 88918912 88918960 -77731336 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1263 439 269 35 53 chrX 88919252 88919421 -77730875 - RNLTR23 LTR ERVK 0 642 477 5 1263 898 161 50 0 chrX 88919747 88919908 -77730388 + URR1A DNA MER1_type 58 226 0 5 1263 3164 151 8 13 chrX 88920080 88920604 -77729692 - Lx2 LINE L1 -2 6995 6475 5 1263 4074 148 15 1 chrX 88920606 88921574 -77728722 - Lx2 LINE L1 -729 6268 5288 5 1263 292 235 20 30 chrX 88921574 88921675 -77728621 + MYSERV-int LTR ERVK 5398 5497 -1053 5 1263 395 328 108 8 chrX 88921930 88922050 -77728246 - MLT1F2 LTR MaLR -236 324 193 5 1263 699 229 228 5 chrX 88922688 88922890 -77727406 - RLTR28B LTR ERVL -218 263 17 5 1263 334 344 0 21 chrX 88923759 88923854 -77726442 + PB1D10 SINE Alu 13 105 -12 5 1263 207 220 0 0 chrX 88923885 88923935 -77726361 + GA-rich Low_complexity Low_complexity 2 51 0 5 1263 27 73 0 0 chrX 88924119 88924174 -77726122 + AT_rich Low_complexity Low_complexity 1 55 0 6 1263 252 0 0 0 chrX 88924387 88924415 -77725881 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 1263 200 261 0 21 chrX 88924421 88924468 -77725828 + G-rich Low_complexity Low_complexity 3 48 0 6 1263 473 288 0 52 chrX 88924583 88924737 -77725559 - B1_Mur1 SINE Alu -1 148 3 6 1263 222 379 10 10 chrX 88925050 88925146 -77725150 - MER5A DNA MER1_type -83 106 11 6 1263 6779 125 19 2 chrX 88925379 88926403 -77723893 + Lx2 LINE L1 5604 6645 -352 6 1263 1322 156 40 0 chrX 88926392 88926616 -77723680 + Lx2 LINE L1 6765 6997 0 6 1263 189 0 0 0 chrX 88926706 88926727 -77723569 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 6 1263 4797 68 2 7 chrX 88926730 88927348 -77722948 - L1Md_F2 LINE L1 -20 6562 5948 6 1263 249 337 12 12 chrX 88928042 88928145 -77722151 + ID4 SINE ID 2 104 -48 6 1263 896 59 0 0 chrX 88928269 88928387 -77721909 - L1_Mm LINE L1 -1449 4434 4317 6 1263 501 222 34 8 chrX 88928699 88928817 -77721479 - ORR1C2 LTR MaLR 0 384 264 6 1263 267 310 60 0 chrX 88928812 88928912 -77721384 - MLT1B LTR MaLR -181 209 104 6 1263 8761 50 1 1 chrX 88928926 88930714 -77719582 - L1Md_F2 LINE L1 -13 6569 4780 6 1263 270 278 0 0 chrX 88930714 88930786 -77719510 - MLT1B LTR MaLR -271 119 48 6 1263 613 168 15 0 chrX 88930812 88930943 -77719353 + CT-rich Low_complexity Low_complexity 1 133 0 6 1263 735 272 15 0 chrX 88930945 88931147 -77719149 + RMER10B LTR ERVL 194 398 0 6 1263 405 0 0 0 chrX 88931182 88931227 -77719069 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 1263 25 31 0 0 chrX 88931321 88931353 -77718943 + AT_rich Low_complexity Low_complexity 1 32 0 6 1263 189 74 0 0 chrX 88931558 88931585 -77718711 + (CTTA)n Simple_repeat Simple_repeat 1 27 0 6 1263 1307 244 80 21 chrX 88931587 88931790 -77718506 - RMER6D LTR ERVK 0 720 503 6 1263 8002 31 6 22 chrX 88931790 88932784 -77717512 - RLTR13A3 LTR ERVK 0 978 1 6 1263 1307 244 80 21 chrX 88932784 88932907 -77717389 - RMER6D LTR ERVK -218 502 375 6 1263 254 250 71 114 chrX 88932956 88933096 -77717200 - RLTR41 LTR ERV1 -62 384 251 6 1263 1451 152 143 22 chrX 88933610 88933932 -77716364 - RMER6D LTR ERVK -359 361 1 6 1263 21 36 0 0 chrX 88933932 88933960 -77716336 + AT_rich Low_complexity Low_complexity 1 28 0 6 1263 1126 89 0 0 chrX 88934003 88934149 -77716147 - B1_Mus1 SINE Alu 0 148 3 6 1263 235 367 57 16 chrX 88934516 88934638 -77715658 - ORR1C2 LTR MaLR -229 130 4 6 1263 1507 182 76 145 chrX 88935292 88935754 -77714542 - RLTR23 LTR ERV1 0 430 1 6 1263 4580 176 12 7 chrX 88935830 88936682 -77713614 + Lx2 LINE L1 6142 6997 0 6 1263 360 0 0 0 chrX 88936808 88936848 -77713448 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1263 400 155 48 0 chrX 88936868 88936952 -77713344 + Lx9 LINE L1 7534 7621 -23 6 1263 880 272 58 126 chrX 88936978 88937461 -77712835 + RLTR12B LTR ERVK 47 496 -32 6 1263 12564 66 1 1 chrX 88937463 88939092 -77711204 + L1Md_F2 LINE L1 3955 5584 -299 6 1263 8129 45 1 4 chrX 88939094 88940091 -77710205 + L1Md_F2 LINE L1 5587 6580 -2 6 1263 288 352 75 77 chrX 88940372 88940865 -77709431 + L1MD2 LINE L1 5835 6326 -33 6 1263 1999 37 0 4 chrX 88940997 88941242 -77709054 - L1Md_A LINE L1 -1 6581 6338 6 1263 195 42 0 0 chrX 88941508 88941532 -77708764 + (GA)n Simple_repeat Simple_repeat 1 24 0 6 1263 21 0 0 0 chrX 88941919 88941940 -77708356 + AT_rich Low_complexity Low_complexity 1 21 0 6 1263 406 310 36 36 chrX 88942276 88942577 -77707719 + Lx9 LINE L1 7319 7619 -25 6 1263 28 0 0 0 chrX 88942594 88942622 -77707674 + AT_rich Low_complexity Low_complexity 1 28 0 6 1263 1283 273 30 8 chrX 88942812 88943177 -77707119 + Lx6 LINE L1 7006 7378 -82 6 1263 7109 130 10 5 chrX 88943732 88945550 -77704746 + L1_Mus4 LINE L1 4804 6630 -6 6 1263 603 245 142 11 chrX 88945935 88946125 -77704171 - B3 SINE B2 -1 215 1 6 1263 362 280 134 7 chrX 88946127 88946425 -77703871 + L1MA5 LINE L1 1263 1598 -4543 6 1263 230 136 0 22 chrX 88946443 88946488 -77703808 + GA-rich Low_complexity Low_complexity 4 47 0 6 1263 306 329 40 53 chrX 88946872 88947023 -77703273 + L1MA5 LINE L1 5280 5428 -779 6 1263 227 227 91 0 chrX 88947053 88947141 -77703155 + L1MA6 LINE L1 5919 6014 -286 6 1263 500 327 83 29 chrX 88947233 88947438 -77702858 + B3 SINE B2 1 216 0 6 1263 636 302 61 20 chrX 88947548 88947893 -77702403 + L1MA5 LINE L1 5716 6074 -290 6 1263 278 256 65 22 chrX 88947898 88947990 -77702306 + L1M5 LINE L1 2319 2414 -3732 6 1263 751 240 16 37 chrX 88948012 88948202 -77702094 + B2_Mm2 SINE B2 1 186 -9 6 1263 2626 87 0 0 chrX 88948460 88948888 -77701408 - L1_Mus1 LINE L1 -639 5928 5501 6 1263 5089 73 0 1 chrX 88948888 88949547 -77700749 + L1_Mus1 LINE L1 5910 6567 0 6 1263 198 0 0 0 chrX 88949598 88949620 -77700676 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 6 1263 1691 279 83 8 chrX 88949622 88950414 -77699882 + L1MC2 LINE L1 4280 5131 -1015 6 1263 383 240 6 31 chrX 88950496 88950655 -77699641 + (TATATG)n Simple_repeat Simple_repeat 2 156 0 6 1263 428 214 9 0 chrX 88951174 88951286 -77699010 + (TA)n Simple_repeat Simple_repeat 2 114 0 6 1263 387 0 0 0 chrX 88951411 88951454 -77698842 + (TTTTA)n Simple_repeat Simple_repeat 4 46 0 6 1263 738 217 28 0 chrX 88951499 88951642 -77698654 + B1_Mur2 SINE Alu 1 147 -2 6 1263 600 308 100 16 chrX 88952302 88952622 -77697674 + L1MC2 LINE L1 5963 6309 -35 6 1263 7533 123 3 4 chrX 88952647 88953820 -77696476 + L1_Mm LINE L1 3989 5160 -723 6 1263 14338 139 20 15 chrX 88953881 88956943 -77693353 + L1Md_F LINE L1 425 3502 -2381 6 1263 25 31 0 0 chrX 88956943 88956975 -77693321 + AT_rich Low_complexity Low_complexity 1 32 0 6 1263 456 176 102 0 chrX 88957574 88957682 -77692614 + Lx2A1 LINE L1 6888 7006 -2 6 1263 972 134 0 0 chrX 88957840 88957982 -77692314 - B1_Mm SINE Alu 0 147 6 6 1263 268 318 110 39 chrX 88958748 88958902 -77691394 + MLT1F1 LTR MaLR 401 565 -4 6 1263 273 351 35 17 chrX 88959088 88959204 -77691092 - PB1D7 SINE Alu -31 118 1 6 1263 27105 153 17 29 chrX 88959675 88964807 -77685489 + L1_Mus2 LINE L1 231 5320 -563 6 1263 3709 34 2 0 chrX 88964807 88965248 -77685048 + L1Md_T LINE L1 6141 6582 0 6 1263 27105 102 21 59 chrX 88965248 88965734 -77684562 + L1_Mus2 LINE L1 5321 5797 -769 6 1263 482 48 14 0 chrX 88965734 88965804 -77684492 + B1_Mus2 SINE Alu 65 139 -8 6 1263 27105 102 21 59 chrX 88965804 88966583 -77683713 + L1_Mus2 LINE L1 5798 6564 -2 6 1263 19652 172 37 28 chrX 88966598 88971439 -77678857 + Lx LINE L1 1639 6518 -136 6 1263 252 0 0 0 chrX 88971439 88971467 -77678829 + (TGGG)n Simple_repeat Simple_repeat 2 29 0 6 1263 6431 142 29 13 chrX 88971467 88971591 -77678705 + Lx LINE L1 6519 6652 -2 6 1263 226 0 0 56 chrX 88971699 88971735 -77678561 + (TTTTTG)n Simple_repeat Simple_repeat 4 37 0 6 1263 892 270 160 0 chrX 88971818 88972055 -77678241 - MTD LTR MaLR -89 330 56 6 1263 295 197 14 0 chrX 88972082 88972153 -77678143 - L1_Mur3 LINE L1 -1606 4274 4203 6 1263 39 0 0 0 chrX 88972397 88972436 -77677860 + AT_rich Low_complexity Low_complexity 1 39 0 6 1263 22 0 0 0 chrX 88973182 88973204 -77677092 + AT_rich Low_complexity Low_complexity 1 22 0 6 1263 37831 42 5 3 chrX 88973409 88979552 -77670744 - L1Md_T LINE L1 -2 6583 333 6 1263 316 314 132 26 chrX 88979576 88979841 -77670455 - L1ME1 LINE L1 -306 5873 5581 6 1263 1282 264 8 35 chrX 88980214 88980614 -77669682 - Lx4B LINE L1 -754 6304 5916 6 1263 2064 216 26 47 chrX 88980618 88981272 -77669024 + Lx4B LINE L1 6306 7054 -4 6 1263 288 370 139 84 chrX 88981479 88981753 -77668543 - B4 SINE B4 0 292 4 6 1263 456 19 0 0 chrX 88981955 88982008 -77668288 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 6 1263 7243 115 8 3 chrX 88982009 88983343 -77666953 - L1_Mus3 LINE L1 -12 6626 5288 6 1263 239 337 36 12 chrX 88983481 88983565 -77666731 + PB1D10 SINE Alu 15 100 -17 6 1263 935 256 148 39 chrX 88983566 88983603 -77666693 - MTE2b LTR MaLR 0 379 328 6 1263 239 54 27 0 chrX 88983603 88983640 -77666656 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 6 1263 935 256 148 39 chrX 88983640 88983939 -77666357 - MTE2b LTR MaLR -52 327 7 6 1263 6244 107 0 1 chrX 88984073 88984951 -77665345 + L1_Mus1 LINE L1 5690 6566 -1 6 1263 214 182 0 0 chrX 88984955 88984999 -77665297 + A-rich Low_complexity Low_complexity 1 44 0 6 1263 198 156 0 0 chrX 88985232 88985277 -77665019 + (TA)n Simple_repeat Simple_repeat 1 45 0 6 1263 202 161 65 0 chrX 88985863 88985925 -77664371 + (TATG)n Simple_repeat Simple_repeat 3 68 0 6 1263 1430 190 40 135 chrX 88986021 88986399 -77663897 + ORR1C2 LTR MaLR 43 384 0 6 1263 1250 283 3 6 chrX 88986399 88986715 -77663581 + ORR1C2-int LTR MaLR 1 315 -1194 6 1263 405 39 0 0 chrX 88986715 88986766 -77663530 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 6 1263 4116 165 45 7 chrX 88986769 88987502 -77662794 - Lx2 LINE L1 -20 6977 6217 6 1263 926 197 18 93 chrX 88987565 88987845 -77662451 + L1VL4 LINE L1 424 682 -5620 6 1263 648 110 0 0 chrX 88987843 88987934 -77662362 + L1Md_F2 LINE L1 4853 4943 -940 6 1263 1996 75 0 29 chrX 88987930 88988206 -77662090 + L1Md_F2 LINE L1 5319 5586 -297 6 1263 7056 88 4 7 chrX 88988207 88989204 -77661092 + L1Md_F2 LINE L1 5588 6581 -1 6 1263 341 221 105 0 chrX 88989207 88989230 -77661066 + Lx3_Mus LINE L1 6012 6034 -975 6 1263 885 113 0 0 chrX 88989230 88989371 -77660925 + (GGGA)n Simple_repeat Simple_repeat 1 141 0 6 1263 341 221 105 0 chrX 88989371 88989442 -77660854 + Lx3_Mus LINE L1 6035 6114 -895 6 1263 25 0 0 0 chrX 88989442 88989467 -77660829 + AT_rich Low_complexity Low_complexity 1 25 0 6 1263 14031 17 0 0 chrX 88989702 88992044 -77658252 - L1Md_T LINE L1 -1 6584 4243 6 1263 23804 48 0 0 chrX 88992038 88995221 -77655075 + L1Md_T LINE L1 969 4248 -1638 6 1263 1612 83 5 0 chrX 88995213 88995430 -77654866 + Lx3_Mus LINE L1 6101 6318 -691 6 1263 585 315 31 6 chrX 88995478 88995683 -77654613 + Lx5 LINE L1 6095 6331 -719 6 1263 731 311 59 65 chrX 88995703 88996074 -77654222 + Lx5 LINE L1 6482 6850 -200 6 1263 2064 242 28 99 chrX 88996099 88996736 -77653560 + RMER19C LTR ERVK 1 592 -19 6 1263 488 281 124 0 chrX 88996736 88996914 -77653382 + Lx6 LINE L1 7257 7456 -4 6 1263 1343 254 188 104 chrX 88997116 88997796 -77652500 - RMER19A LTR ERVK 0 737 1 6 1264 22 0 0 0 chrX 88998550 88998572 -77651724 + AT_rich Low_complexity Low_complexity 1 22 0 6 1264 22 0 0 0 chrX 88999575 88999597 -77650699 + AT_rich Low_complexity Low_complexity 1 22 0 6 1264 369 62 0 0 chrX 88999870 88999918 -77650378 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 6 1264 258 288 53 27 chrX 88999924 88999999 -77650297 - RSINE1 SINE B4 -30 135 59 6 1264 262 109 0 18 chrX 89000059 89000115 -77650181 - Lx9 LINE L1 0 7644 7590 1 1264 689 254 16 11 chrX 89000130 89000313 -77649983 + Lx9 LINE L1 6972 7155 -489 2 1264 237 383 85 8 chrX 89000336 89000465 -77649831 - MLT1J-int LTR MaLR -71 1316 1178 3 1264 444 283 0 0 chrX 89000569 89000675 -77649621 + ORR1D2 LTR MaLR 2 107 -263 4 1264 506 208 34 7 chrX 89000702 89000830 -77649466 + ORR1D2 LTR MaLR 241 379 0 4 1264 427 360 28 96 chrX 89000912 89001235 -77649061 + MLT1D LTR MaLR 137 437 -68 5 1264 360 0 0 0 chrX 89001237 89001277 -77649019 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 6 1264 295 344 0 0 chrX 89002004 89002094 -77648202 + MER63C DNA AcHobo 303 392 -538 7 1264 259 75 36 36 chrX 89002194 89002249 -77648047 + (TCTCTG)n Simple_repeat Simple_repeat 4 58 0 8 1264 1318 119 25 0 chrX 89002390 89002591 -77647705 - L1_Mus1 LINE L1 -3 6564 6359 9 1264 23 68 0 0 chrX 89003289 89003333 -77646963 + AT_rich Low_complexity Low_complexity 1 44 0 1 1264 483 314 83 77 chrX 89003336 89003698 -77646598 + MER67D LTR ERV1 1 364 -150 1 1264 277 264 0 26 chrX 89004433 89004546 -77645750 + Lx9 LINE L1 7529 7638 -6 1 1264 504 310 80 28 chrX 89005021 89005185 -77645111 + B4 SINE B4 60 232 -60 1 1264 691 264 35 1 chrX 89005185 89005376 -77644920 + B3 SINE B2 3 197 -1 1 1264 353 218 45 8 chrX 89005462 89005596 -77644700 + (TA)n Simple_repeat Simple_repeat 2 140 0 1 1264 24 0 0 29 chrX 89005729 89005742 -77644554 + AT_rich Low_complexity Low_complexity 1 13 0 1 1264 306 0 0 0 chrX 89005742 89005776 -77644520 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1264 24 0 0 29 chrX 89005776 89005797 -77644499 + AT_rich Low_complexity Low_complexity 1 21 0 1 1264 224 300 12 12 chrX 89006366 89006447 -77643849 + GA-rich Low_complexity Low_complexity 3 83 0 1 1264 21 36 0 0 chrX 89006718 89006746 -77643550 + AT_rich Low_complexity Low_complexity 1 28 0 2 1264 210 161 54 0 chrX 89007681 89007737 -77642559 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 1264 246 265 126 22 chrX 89007860 89007995 -77642301 + MER113 DNA MER1_type 331 479 -42 2 1264 503 230 25 63 chrX 89008384 89008542 -77641754 + Lx7 LINE L1 7524 7675 -21 2 1264 192 119 70 23 chrX 89009135 89009178 -77641118 - L3 LINE CR1 -2804 1685 1641 2 1264 240 184 0 0 chrX 89009652 89009701 -77640595 + (TAA)n Simple_repeat Simple_repeat 1 49 0 2 1264 1873 87 45 0 chrX 89009953 89010218 -77640078 - L1_Mus1 LINE L1 -1 6566 6290 2 1264 431 223 47 62 chrX 89010361 89010373 -77639923 - B1_Mur4 SINE Alu 0 150 139 2 1264 483 33 0 0 chrX 89010373 89010434 -77639862 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1264 460 228 40 65 chrX 89010434 89010573 -77639723 - B1_Mur2 SINE Alu -12 138 6 2 1264 460 29 14 28 chrX 89011915 89011986 -77638310 + (TATAA)n Simple_repeat Simple_repeat 2 71 0 2 1264 744 150 0 0 chrX 89012148 89012275 -77638021 + (TATATG)n Simple_repeat Simple_repeat 3 129 0 3 1264 259 169 132 22 chrX 89012278 89012369 -77637927 - L1_Mus3 LINE L1 0 6638 6538 3 1264 495 190 31 31 chrX 89012403 89012563 -77637733 - RLTR11A LTR ERVK -330 198 12 3 1264 3092 192 27 9 chrX 89012588 89013251 -77637045 - L1_Mur2 LINE L1 -566 5311 4637 3 1264 6423 171 14 33 chrX 89013252 89014138 -77636158 + Lx2B LINE L1 4923 5796 -1204 3 1264 4157 179 85 14 chrX 89014138 89014649 -77635647 - RMER17B LTR ERVK -4 954 409 3 1264 647 94 0 17 chrX 89014649 89014768 -77635528 + (CAGAGA)n Simple_repeat Simple_repeat 4 120 0 3 1264 4157 179 85 14 chrX 89014768 89015146 -77635150 - RMER17B LTR ERVK -550 408 2 3 1264 6423 192 33 48 chrX 89015146 89016367 -77633929 + Lx2B LINE L1 5797 7000 0 3 1264 5197 153 101 52 chrX 89016367 89016979 -77633317 + RLTR19-int LTR ERVK 885 1536 -4601 3 1264 1479 126 103 198 chrX 89016979 89017504 -77632792 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1264 5197 153 101 52 chrX 89017504 89018210 -77632086 + RLTR19-int LTR ERVK 1537 2267 -3870 3 1264 4025 117 8 2 chrX 89018215 89018854 -77631442 + Lx LINE L1 5548 6190 -464 3 1264 708 134 37 15 chrX 89018847 89018983 -77631313 + Lx LINE L1 6478 6616 -38 3 1264 4822 93 4 57 chrX 89019019 89019761 -77630535 - L1_Mus3 LINE L1 0 6638 5936 4 1264 12154 174 58 57 chrX 89019797 89022581 -77627715 + RLTR19-int LTR ERVK 2264 5049 -1088 3 1264 2273 210 80 114 chrX 89022565 89023275 -77627021 + RLTR19-int LTR ERVK 5451 6136 -1 3 1264 2044 196 34 93 chrX 89023275 89023810 -77626486 + RLTR19C LTR ERVK 1 503 -3 3 1264 6751 81 5 6 chrX 89023814 89024733 -77625563 + L1_Mus2 LINE L1 5609 6562 -4 4 1264 26 30 0 0 chrX 89024743 89024776 -77625520 + AT_rich Low_complexity Low_complexity 1 33 0 4 1264 27 29 0 0 chrX 89024818 89024852 -77625444 + AT_rich Low_complexity Low_complexity 1 34 0 4 1264 4950 228 60 38 chrX 89026459 89027752 -77622544 - RMER12 LTR ERVK 0 1322 1 4 1264 190 152 39 29 chrX 89029220 89029322 -77620974 + (TAGA)n Simple_repeat Simple_repeat 2 104 0 4 1264 221 350 17 0 chrX 89029506 89029566 -77620730 - B1F SINE Alu -46 103 43 4 1264 204 88 0 56 chrX 89029588 89029624 -77620672 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 4 1264 2201 320 52 21 chrX 89030373 89031343 -77618953 - Lx8 LINE L1 -489 7155 6217 4 1264 204 226 0 0 chrX 89031343 89031396 -77618900 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 1264 567 306 63 43 chrX 89031396 89031857 -77618439 - Lx7 LINE L1 -1501 6195 5719 5 1264 30 0 0 0 chrX 89031875 89031905 -77618391 + AT_rich Low_complexity Low_complexity 1 30 0 5 1264 775 147 7 40 chrX 89031920 89032069 -77618227 - Lx3B LINE L1 -2 6971 6828 5 1264 529 258 21 18 chrX 89032071 89032283 -77618013 - Lx7 LINE L1 -1953 5743 5527 5 1264 215 318 213 13 chrX 89032426 89032576 -77617720 - B4A SINE B4 -111 181 2 5 1264 1355 117 10 0 chrX 89032742 89032947 -77617349 - L1_Mus2 LINE L1 -1 6565 6359 5 1264 360 40 20 20 chrX 89032947 89032998 -77617298 - L1_Mus2 LINE L1 -181 6385 6335 5 1264 271 281 47 0 chrX 89033077 89033141 -77617155 + ID4 SINE ID 15 81 -2 5 1264 434 245 225 31 chrX 89033090 89033250 -77617046 + ID_B1 SINE B4 32 222 -2 5 1264 21 0 0 0 chrX 89033464 89033485 -77616811 + AT_rich Low_complexity Low_complexity 1 21 0 5 1264 515 243 18 0 chrX 89034057 89034168 -77616128 - PB1D10 SINE Alu 0 117 5 5 1264 1371 239 24 76 chrX 89034398 89034779 -77615517 - MTD LTR MaLR -8 411 51 5 1264 491 216 71 9 chrX 89034786 89034898 -77615398 + MTD LTR MaLR 280 398 -21 6 1264 3200 58 5 0 chrX 89034972 89035366 -77614930 - MTA_Mm LTR MaLR 0 396 1 6 1264 189 127 35 35 chrX 89035626 89035683 -77614613 + T-rich Low_complexity Low_complexity 4 60 0 6 1264 3334 162 5 3 chrX 89035683 89036278 -77614018 + L1_Mur2 LINE L1 4761 5356 -521 6 1264 363 222 11 22 chrX 89036488 89036580 -77613716 + Charlie2b DNA MER1_type 1805 1895 -887 6 1264 251 310 56 0 chrX 89036593 89036664 -77613632 - ID4 SINE ID 0 83 9 6 1264 657 218 0 22 chrX 89036672 89036808 -77613488 - B1_Mur2 SINE Alu 0 149 17 6 1264 236 324 14 0 chrX 89036841 89036915 -77613381 - Lx8 LINE L1 -247 7226 7152 6 1264 253 349 107 38 chrX 89036989 89037017 -77613279 - ID_B1 SINE B4 -3 221 87 6 1264 270 322 20 82 chrX 89037017 89037115 -77613181 - PB1 SINE Alu -30 97 6 6 1264 243 303 172 0 chrX 89037234 89037333 -77612963 - PB1D10 SINE Alu -1 116 1 7 1264 553 279 71 0 chrX 89037385 89037539 -77612757 - B3A SINE B2 -31 167 3 7 1264 28 48 0 0 chrX 89037643 89037685 -77612611 + AT_rich Low_complexity Low_complexity 1 42 0 7 1264 1024 205 51 0 chrX 89037835 89038030 -77612266 - B3 SINE B2 -10 206 2 7 1264 24 67 0 0 chrX 89038046 89038091 -77612205 + AT_rich Low_complexity Low_complexity 1 45 0 7 1264 848 61 9 0 chrX 89038339 89038453 -77611843 - B1_Mm SINE Alu 0 147 33 7 1264 338 320 16 16 chrX 89038494 89038621 -77611675 - Lx8 LINE L1 -190 7283 7157 7 1264 241 262 49 0 chrX 89038688 89038749 -77611547 - Lx8 LINE L1 -258 7215 7152 7 1264 297 333 91 10 chrX 89038934 89039143 -77611153 + Charlie2b DNA MER1_type 2554 2779 -3 6 1264 550 255 124 42 chrX 89039744 89040006 -77610290 + L1MC5 LINE L1 6654 7016 -1026 7 1264 241 280 53 13 chrX 89040009 89040085 -77610211 + ID4_ SINE ID 1 79 -4 7 1264 742 250 60 102 chrX 89040092 89040426 -77609870 + L1MB4 LINE L1 5825 6144 -36 8 1264 1069 174 50 0 chrX 89040421 89040622 -77609674 - Lx9 LINE L1 -243 7401 7191 8 1264 417 199 6 49 chrX 89040617 89040778 -77609518 + Lx9 LINE L1 7418 7610 -34 8 1264 22 0 0 0 chrX 89040778 89040800 -77609496 + AT_rich Low_complexity Low_complexity 1 22 0 8 1264 219 36 0 0 chrX 89040841 89040869 -77609427 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 8 1264 421 318 28 0 chrX 89041035 89041142 -77609154 + ID_B1 SINE B4 87 196 -28 8 1264 26369 24 0 0 chrX 89041145 89044260 -77606036 + L1Md_T LINE L1 2472 5586 -297 8 1264 8012 54 0 0 chrX 89044261 89045255 -77605041 + L1Md_T LINE L1 5588 6581 -1 8 1264 1185 206 94 34 chrX 89045317 89045614 -77604682 + RLTR46 LTR ERVK 1 315 -5 8 1264 1916 231 74 112 chrX 89045723 89046589 -77603707 + RLTR42-int LTR ERVK 4229 5061 -461 8 1264 9293 21 0 0 chrX 89046978 89048056 -77602240 + L1Md_T LINE L1 4509 5586 -297 8 1264 8537 28 0 0 chrX 89048056 89049052 -77601244 + L1Md_T LINE L1 5587 6582 0 8 1264 1130 219 85 30 chrX 89049425 89049774 -77600522 + Lx7 LINE L1 7075 7695 -1 8 1264 2751 96 10 10 chrX 89050171 89050571 -77599725 - MTB LTR MaLR 0 400 1 9 1264 6489 125 9 68 chrX 89050573 89051738 -77598558 - MTB-int LTR MaLR -2 1096 1 9 1264 1786 94 0 0 chrX 89051738 89051982 -77598314 - MTB LTR MaLR 0 400 157 9 1264 988 169 62 6 chrX 89052414 89052593 -77597703 + URR1B DNA MER1_type 37 225 0 9 1264 304 149 0 21 chrX 89052769 89052817 -77597479 + RLTR19B LTR ERVK 587 633 -82 9 1264 4562 155 84 32 chrX 89052870 89053372 -77596924 + RLTR19-int LTR ERVK 1 514 -5623 9 1264 234 0 0 0 chrX 89053372 89053398 -77596898 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 9 1264 4562 155 84 32 chrX 89053398 89053803 -77596493 + RLTR19-int LTR ERVK 515 954 -5183 9 1264 1099 82 0 7 chrX 89053830 89053978 -77596318 - B1_Mus2 SINE Alu 0 147 1 9 1264 1189 75 0 0 chrX 89054006 89054165 -77596131 + B2_Mm1a SINE B2 2 160 -33 9 1264 450 0 0 0 chrX 89054165 89054215 -77596081 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 9 1264 9922 149 62 86 chrX 89054225 89055169 -77595127 + RLTR19-int LTR ERVK 956 1882 -4255 9 1264 225 0 0 0 chrX 89055169 89055194 -77595102 + (TA)n Simple_repeat Simple_repeat 1 25 0 9 1264 9922 149 62 86 chrX 89055194 89055614 -77594682 + RLTR19-int LTR ERVK 1883 2216 -3921 9 1264 4583 132 10 17 chrX 89055614 89056336 -77593960 - L1_Mus4 LINE L1 0 6636 5920 9 1264 5516 163 77 103 chrX 89056336 89057593 -77592703 + RLTR19-int LTR ERVK 2217 3510 -2627 9 1264 17207 176 20 46 chrX 89058141 89062316 -77587980 + Lx3C LINE L1 881 4936 -950 9 1264 2219 90 60 17 chrX 89062316 89062668 -77587628 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1264 56176 30 7 2 chrX 89062678 89069094 -77581202 + IAPEz-int LTR ERVK 35 6478 -3 1 1264 2219 90 60 17 chrX 89069098 89069450 -77580846 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1264 6353 183 20 13 chrX 89069451 89071359 -77578937 + Lx3C LINE L1 4932 6841 -135 9 1264 1716 136 7 33 chrX 89071366 89071639 -77578657 + RLTR19-int LTR ERVK 4548 4813 -1324 9 1264 217 200 0 0 chrX 89072137 89072177 -77578119 + B3A SINE B2 1 40 -158 1 1264 21 36 0 0 chrX 89072258 89072286 -77578010 + AT_rich Low_complexity Low_complexity 1 28 0 1 1264 1044 141 11 6 chrX 89072331 89072510 -77577786 + L1_Mus4 LINE L1 6456 6635 -1 1 1264 23 68 0 0 chrX 89073155 89073199 -77577097 + AT_rich Low_complexity Low_complexity 1 44 0 1 1264 6444 152 10 5 chrX 89073262 89074300 -77575996 - Lx LINE L1 0 6654 5612 1 1264 646 207 46 20 chrX 89074571 89074724 -77575572 + RMER10B LTR ERVL 188 344 -54 1 1264 186 43 0 0 chrX 89074733 89074756 -77575540 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1264 449 352 69 43 chrX 89074788 89075064 -77575232 + B4A SINE B4 9 291 -1 1 1264 1643 31 0 10 chrX 89077608 89077801 -77572495 - B2_Mm1a SINE B2 0 193 3 1 1264 1084 322 56 34 chrX 89077827 89078413 -77571883 - Lx8 LINE L1 -3 7470 6872 1 1264 266 234 13 147 chrX 89078426 89078576 -77571720 - L1MC4 LINE L1 -2084 5958 5829 1 1264 999 221 98 17 chrX 89078580 89078875 -77571421 - Lx9 LINE L1 -6 7638 7320 1 1264 1015 229 104 0 chrX 89078880 89079129 -77571167 - Lx9 LINE L1 -978 6666 6392 1 1264 424 254 18 0 chrX 89079453 89079563 -77570733 - Lx9 LINE L1 -1213 6431 6320 1 1264 1874 185 142 0 chrX 89079668 89080085 -77570211 - Lx9 LINE L1 -7 7637 7162 1 1264 204 40 0 0 chrX 89080087 89080112 -77570184 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1264 689 240 196 0 chrX 89080151 89080330 -77569966 - Lx6 LINE L1 -11 7449 7236 1 1264 38757 34 3 0 chrX 89080444 89089817 -77560479 - L1Md_T LINE L1 0 6585 1 1 1264 285 231 15 15 chrX 89089821 89089887 -77560409 - Lx9 LINE L1 -493 7151 7086 1 1264 1762 213 22 43 chrX 89089889 89090306 -77559990 + MTD LTR MaLR 10 417 -2 1 1264 403 229 0 0 chrX 89090506 89090589 -77559707 + B4 SINE B4 2 84 -208 1 1264 3301 14 0 0 chrX 89090654 89091021 -77559275 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1264 56900 19 18 2 chrX 89091021 89097393 -77552903 + IAPEz-int LTR ERVK 8 6481 0 1 1264 3301 14 0 0 chrX 89097393 89097760 -77552536 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1264 288 323 78 40 chrX 89097834 89098501 -77551795 - L1MC LINE L1 -2989 3157 2466 1 1264 3887 139 69 3 chrX 89098513 89099289 -77551007 - Lx2 LINE L1 -4 7004 6078 1 1264 686 206 96 0 chrX 89099297 89099443 -77550853 - B3 SINE B2 -56 160 1 1 1264 30648 47 1 1 chrX 89099455 89103905 -77546391 - L1Md_F3 LINE L1 -14 6570 2125 1 1264 432 223 0 0 chrX 89103925 89104019 -77546277 - L1Md_F LINE L1 -6191 328 235 1 1264 994 243 11 24 chrX 89104010 89104297 -77545999 - L1VL1 LINE L1 -6123 299 17 1 1264 379 321 40 31 chrX 89104337 89104659 -77545637 - L1MC LINE L1 -3704 2442 2118 1 1264 187 79 26 26 chrX 89104673 89104712 -77545584 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1264 4727 63 33 9 chrX 89105409 89106045 -77544251 - L1Md_F2 LINE L1 0 6582 5932 1 1264 1441 104 0 0 chrX 89106045 89106246 -77544050 + L1_Mm LINE L1 4975 5175 -708 1 1264 2503 18 0 0 chrX 89106241 89106527 -77543769 - L1_Mm LINE L1 -583 5300 5015 1 1264 3739 36 0 2 chrX 89106527 89106967 -77543329 + L1Md_T LINE L1 6143 6581 -1 1 1264 806 32 0 0 chrX 89106967 89107061 -77543235 + L1_Mm LINE L1 5294 5387 -496 1 1264 2114 161 5 25 chrX 89107057 89107457 -77542839 - L1_Mur3 LINE L1 -1583 4297 3906 1 1264 264 253 66 44 chrX 89107461 89107552 -77542744 + RMER13B LTR ERVK 812 904 -4 1 1264 22 0 0 0 chrX 89107576 89107598 -77542698 + AT_rich Low_complexity Low_complexity 1 22 0 1 1264 37 52 0 0 chrX 89110197 89110255 -77540041 + AT_rich Low_complexity Low_complexity 1 58 0 1 1264 253 276 68 17 chrX 89110656 89110774 -77539522 - Lx7 LINE L1 -1794 5902 5779 1 1264 492 236 35 27 chrX 89110757 89110916 -77539380 - Lx4B LINE L1 -3 7055 6879 1 1264 678 248 67 5 chrX 89110948 89111143 -77539153 - B3 SINE B2 -6 210 4 1 1264 589 264 66 20 chrX 89111148 89111392 -77538904 - Lx7 LINE L1 -1895 5801 5508 1 1264 455 351 125 14 chrX 89111484 89111773 -77538523 + MLT1A0 LTR MaLR 32 352 -13 1 1264 252 0 0 0 chrX 89111878 89111906 -77538390 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1264 338 310 73 37 chrX 89112336 89112554 -77537742 - L1MC3 LINE L1 -9 7776 7551 1 1264 542 249 115 38 chrX 89112651 89112860 -77537436 + MLT1B LTR MaLR 164 388 -2 1 1264 243 0 0 0 chrX 89112961 89112988 -77537308 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1 1264 7856 111 68 2 chrX 89112991 89114238 -77536058 - L1_Mus3 LINE L1 -7 6631 5305 1 1264 3558 18 0 0 chrX 89114238 89114634 -77535662 - MTA_Mm LTR MaLR 0 396 1 1 1264 9166 36 2 1 chrX 89114634 89115731 -77534565 - MTA_Mm-int LTR MaLR 0 1098 1 1 1264 3558 18 0 0 chrX 89115731 89116127 -77534169 - MTA_Mm LTR MaLR 0 396 1 1 1264 7856 139 1 6 chrX 89116127 89116857 -77533439 - L1_Mus3 LINE L1 -579 5304 4578 1 1264 2441 145 15 7 chrX 89116856 89117320 -77532976 + L1_Mus3 LINE L1 4105 4572 -1311 1 1264 6688 99 6 2 chrX 89117328 89118624 -77531672 - L1_Mus1 LINE L1 0 6567 5267 1 1264 669 87 10 0 chrX 89118681 89118785 -77531511 + L1_Mus2 LINE L1 4239 4343 -1540 1 1264 34404 36 5 8 chrX 89118786 89124175 -77526121 + L1Md_T LINE L1 215 5585 -298 1 1264 8135 43 4 0 chrX 89124176 89125167 -77525129 + L1Md_T LINE L1 5587 6581 -1 1 1264 6466 85 0 0 chrX 89125167 89126088 -77524208 + L1_Mus2 LINE L1 4328 5248 -635 1 1264 27 0 0 0 chrX 89126836 89126863 -77523433 + AT_rich Low_complexity Low_complexity 1 27 0 1 1264 3452 89 8 0 chrX 89126959 89127433 -77522863 - L1_Mus2 LINE L1 -5 6561 6084 1 1264 3496 86 0 0 chrX 89127436 89127992 -77522304 + L1_Mus2 LINE L1 5519 6075 -491 1 1264 22 0 0 0 chrX 89128100 89128122 -77522174 + AT_rich Low_complexity Low_complexity 1 22 0 1 19 517 148 87 19 chrX 89128884 89128987 -77521309 + Lx2B LINE L1 6646 6755 -245 1 1265 387 98 0 0 chrX 89128987 89129048 -77521248 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1265 1302 195 93 20 chrX 89129172 89129517 -77520779 - Lx4A LINE L1 -293 6765 6396 1 1265 249 33 0 0 chrX 89129692 89129722 -77520574 + (ATTG)n Simple_repeat Simple_repeat 2 31 0 1 1265 346 176 162 0 chrX 89129726 89129794 -77520502 - Lx8 LINE L1 -143 7330 7252 1 1265 5129 186 60 10 chrX 89130130 89131228 -77519068 + Lx5 LINE L1 5898 7050 0 1 1265 3787 124 0 21 chrX 89131552 89132135 -77518161 - L1_Mus4 LINE L1 -7 6629 6059 1 1265 180 244 176 35 chrX 89132592 89132677 -77517619 - MIR3 SINE MIR -1 207 111 1 1265 3918 66 34 0 chrX 89133956 89134456 -77515840 + MURVY-LTR LTR ERV1 1 517 -2 1 1265 2039 99 3 0 chrX 89134994 89135297 -77514999 - L1_Mus4 LINE L1 -559 6077 5774 1 1265 3288 127 2 6 chrX 89135313 89135911 -77514385 + Lx3C LINE L1 5368 5960 -1016 1 1265 780 196 5 5 chrX 89135905 89136095 -77514201 - L1_Mur1 LINE L1 -515 5371 5182 1 1265 3320 152 26 0 chrX 89136116 89136727 -77513569 - MusHAL1 LINE L1 -1130 1582 956 1 1265 2672 108 32 12 chrX 89136727 89137158 -77513138 + L1_Mus3 LINE L1 6198 6637 -1 1 1265 6832 149 58 27 chrX 89137855 89139681 -77510615 - L1_Mus2 LINE L1 -43 6523 4632 1 1265 252 59 0 0 chrX 89139681 89139715 -77510581 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 1 1265 6832 151 30 4 chrX 89139715 89139800 -77510496 - L1_Mus2 LINE L1 -1252 4631 4546 1 1265 2558 76 3 28 chrX 89139797 89140189 -77510107 + L1_Mus1 LINE L1 3448 3829 -2054 1 1265 3046 17 43 0 chrX 89140189 89140541 -77509755 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1265 52641 20 21 0 chrX 89140541 89146851 -77503445 - IAPEz-int LTR ERVK 0 6481 38 1 1265 3046 17 43 0 chrX 89146864 89147216 -77503080 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1265 7244 136 37 44 chrX 89147216 89149981 -77500315 + L1_Mus1 LINE L1 3824 6567 0 1 1265 366 310 34 47 chrX 89150155 89150453 -77499843 - L1M2 LINE L1 -2012 4131 3838 1 1265 255 285 16 70 chrX 89150694 89150763 -77499533 - L1_Mur3 LINE L1 -2480 3400 3337 1 1265 3066 27 52 0 chrX 89150763 89151132 -77499164 + RLTR10 LTR ERVK 1 388 -2 1 1265 255 285 16 70 chrX 89151132 89151247 -77499049 - L1_Mur3 LINE L1 -2544 3336 3226 1 1265 25 0 0 0 chrX 89151296 89151321 -77498975 + AT_rich Low_complexity Low_complexity 1 25 0 1 1265 652 314 99 28 chrX 89151370 89152149 -77498147 - L1M2 LINE L1 -3057 3086 2253 1 1265 1152 210 141 39 chrX 89152268 89152639 -77497657 + RLTR26 LTR ERVK 4 447 -195 1 1265 841 175 88 21 chrX 89152644 89152837 -77497459 + URR1A DNA MER1_type 21 226 0 1 1265 652 133 71 0 chrX 89152837 89152950 -77497346 + Lx7 LINE L1 6750 6870 -826 1 1265 267 182 0 0 chrX 89153062 89153106 -77497190 + ID SINE ID 1 44 -180 1 1265 263 309 57 85 chrX 89153166 89153272 -77497024 - RMER12 LTR ERVK -491 831 729 1 1265 1281 273 41 18 chrX 89153225 89153564 -77496732 - ORR1D2 LTR MaLR -23 347 1 1 1265 2000 295 64 88 chrX 89155026 89155714 -77494582 + RMER13A LTR ERVK 1 664 -196 1 1265 868 24 63 0 chrX 89155714 89155841 -77494455 - L1Md_F2 LINE L1 0 6582 6448 1 1265 2000 295 64 88 chrX 89155841 89156032 -77494264 + RMER13A LTR ERVK 665 859 -1 1 1265 207 0 0 0 chrX 89156717 89156740 -77493556 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1265 1080 88 0 13 chrX 89156755 89156904 -77493392 - B1_Mm SINE Alu 0 147 1 1 1265 1228 331 70 9 chrX 89157251 89157812 -77492484 - Lx8 LINE L1 -393 7080 6486 1 1265 232 48 48 0 chrX 89158345 89158387 -77491909 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 1265 1031 76 14 7 chrX 89158389 89158535 -77491761 - B1_Mus2 SINE Alu 0 147 1 1 1265 230 317 0 19 chrX 89158535 89158638 -77491658 - Lx9 LINE L1 -379 7265 7165 1 1265 796 265 9 58 chrX 89158724 89158948 -77491348 - B3 SINE B2 -3 213 1 1 1265 21 36 0 0 chrX 89158957 89158985 -77491311 + AT_rich Low_complexity Low_complexity 1 28 0 1 1265 868 298 58 49 chrX 89159401 89159755 -77490541 - MTE2a LTR MaLR -50 369 6 1 1265 243 79 0 0 chrX 89159773 89159811 -77490485 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 1 1265 219 36 0 0 chrX 89159806 89159834 -77490462 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1265 378 309 15 31 chrX 89159848 89159978 -77490318 - B1F SINE Alu -7 142 15 1 1265 285 365 5 16 chrX 89160333 89160517 -77489779 - Lx9 LINE L1 -314 7330 7149 1 1265 1038 206 51 43 chrX 89160521 89160775 -77489521 - ORR1C1 LTR MaLR 0 378 123 1 1265 2697 171 22 20 chrX 89160758 89161258 -77489038 - RLTR20B2 LTR ERVK -54 506 6 1 1265 523 232 41 48 chrX 89161243 89161388 -77488908 - ORR1C1 LTR MaLR -234 144 1 1 1265 671 309 154 35 chrX 89161388 89161908 -77488388 - Lx9 LINE L1 -495 7149 6568 1 1265 278 67 22 0 chrX 89161919 89161964 -77488332 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 1265 284 324 58 58 chrX 89161973 89162281 -77488015 + L1M1 LINE L1 5445 5752 -548 1 1265 195 184 0 0 chrX 89162281 89162319 -77487977 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 1265 6584 122 17 3 chrX 89163429 89164473 -77485823 - Lx LINE L1 -9 6645 5587 2 1265 207 0 0 0 chrX 89164688 89164711 -77485585 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1265 516 45 0 0 chrX 89164711 89164777 -77485519 + (TA)n Simple_repeat Simple_repeat 1 67 0 2 1265 3996 48 6 0 chrX 89164809 89165511 -77484785 - L1Md_F2 LINE L1 -466 6116 5412 2 1265 3339 87 16 0 chrX 89165511 89165959 -77484337 + L1_Mus1 LINE L1 6107 6561 -6 2 1265 600 137 0 0 chrX 89166000 89166102 -77484194 + (TA)n Simple_repeat Simple_repeat 2 103 0 2 1265 21 71 0 0 chrX 89166832 89166874 -77483422 + AT_rich Low_complexity Low_complexity 1 42 0 2 1265 4428 117 31 1 chrX 89167082 89167758 -77482538 + L1_Mus4 LINE L1 5940 6635 -1 2 1265 295 208 26 78 chrX 89167933 89168048 -77482248 - L1_Rod LINE L1 -7063 109 1 2 1265 437 319 68 8 chrX 89168092 89168329 -77481967 - L1_Rod LINE L1 -6908 264 14 2 1265 1638 314 57 25 chrX 89168421 89169074 -77481222 + RMER15-int LTR ERVL 1726 2399 -2600 2 1265 905 282 146 13 chrX 89169143 89169534 -77480762 + RMER15-int LTR ERVL 4167 4609 -390 2 1265 659 154 98 15 chrX 89169574 89169706 -77480590 + RMER15-int LTR ERVL 4810 4952 -47 2 1265 345 159 58 0 chrX 89169710 89169779 -77480517 + RMER15 LTR ERVL 1 73 -502 2 1265 6212 78 5 0 chrX 89169781 89170640 -77479656 + L1_Mus1 LINE L1 5704 6566 -1 2 1265 537 55 0 0 chrX 89170717 89170790 -77479506 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 1265 343 316 99 32 chrX 89171054 89171306 -77478990 - L1_Rod LINE L1 -6897 275 7 2 1265 237 315 34 0 chrX 89171302 89171391 -77478905 - L1_Rod LINE L1 -6932 240 149 2 1265 479 294 29 42 chrX 89171560 89171801 -77478495 - L1_Rod LINE L1 -6928 244 7 2 1265 404 271 58 63 chrX 89171900 89172105 -77478191 - L1_Rod LINE L1 -6962 210 7 2 1265 234 381 30 15 chrX 89172197 89172397 -77477899 - L1_Rod LINE L1 -6957 215 13 2 1265 239 312 11 0 chrX 89172386 89172479 -77477817 - L1_Rod LINE L1 -6918 254 161 2 1265 263 310 10 60 chrX 89172510 89172709 -77477587 - L1_Rod LINE L1 -6968 204 16 2 1265 364 305 8 0 chrX 89173027 89173145 -77477151 - L1_Rod LINE L1 -6987 185 67 2 1265 482 339 8 16 chrX 89173261 89173507 -77476789 - L1_Rod LINE L1 -6914 258 15 2 1265 394 352 49 0 chrX 89173572 89173734 -77476562 - L1_Rod LINE L1 -6933 239 70 2 1265 2980 71 10 12 chrX 89173734 89173747 -77476549 + MTB LTR MaLR 1 13 -387 2 1265 2554 99 5 11 chrX 89173747 89174123 -77476173 + L1_Mus3 LINE L1 6248 6621 -17 2 1265 2980 71 10 12 chrX 89174123 89174509 -77475787 + MTB LTR MaLR 14 399 -1 2 1265 258 299 102 0 chrX 89174677 89174824 -77475472 - L1_Rod LINE L1 -6998 174 13 2 1265 430 298 21 26 chrX 89174929 89175122 -77475174 - L1_Rod LINE L1 -6964 208 17 2 1265 380 360 8 8 chrX 89175196 89175431 -77474865 - L1_Rod LINE L1 -6925 247 13 2 1265 345 24 0 0 chrX 89176096 89176138 -77474158 + (TTA)n Simple_repeat Simple_repeat 1 42 0 2 1265 1033 177 0 9 chrX 89176138 89176346 -77473950 - Lx LINE L1 -28 6626 6421 2 1265 1201 97 11 0 chrX 89176517 89176703 -77473593 + L1_Mus3 LINE L1 6450 6637 -1 2 1265 234 0 0 0 chrX 89180126 89180152 -77470144 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1265 252 352 46 23 chrX 89180187 89180318 -77469978 - B1F SINE Alu -14 135 2 2 1265 284 349 85 23 chrX 89180363 89180492 -77469804 - B1F SINE Alu -10 139 3 2 1265 350 269 141 22 chrX 89180658 89180957 -77469339 - L1M2 LINE L1 -680 5484 5149 2 1265 247 361 46 9 chrX 89181537 89181646 -77468650 - B3 SINE B2 -13 203 91 2 1265 3140 24 84 0 chrX 89181695 89182074 -77468222 - IAPLTR2a LTR ERVK 0 411 1 2 1265 451 288 120 24 chrX 89182160 89182452 -77467844 - L1MD LINE L1 -2304 5691 5372 2 1265 2114 93 7 10 chrX 89182609 89182913 -77467383 - L1_Mus3 LINE L1 -6 6632 6330 2 1265 1587 297 39 7 chrX 89183185 89183745 -77466551 - Lx8 LINE L1 -85 7388 6811 2 1265 431 143 13 13 chrX 89183746 89183824 -77466472 - RMER6C LTR ERVK 0 690 613 2 1265 233 323 82 75 chrX 89183824 89183958 -77466338 + RMER13A LTR ERVK 1 135 -725 2 1265 396 346 53 60 chrX 89184010 89184313 -77465983 + RLTR25B LTR ERVK 1 299 -804 2 1265 22 70 0 0 chrX 89184993 89185036 -77465260 + AT_rich Low_complexity Low_complexity 1 43 0 2 1265 230 269 38 13 chrX 89185658 89185737 -77464559 + GA-rich Low_complexity Low_complexity 1 81 0 2 1265 393 314 78 47 chrX 89185881 89186096 -77464200 + RMER20B LTR ERVK 226 419 -208 2 1265 1053 221 40 57 chrX 89186552 89186849 -77463447 - RMER6C LTR ERVK -72 618 327 2 1265 284 164 15 0 chrX 89186850 89186917 -77463379 + CT-rich Low_complexity Low_complexity 1 68 0 2 1265 1497 177 134 24 chrX 89186921 89187257 -77463039 - RMER6C LTR ERVK -317 373 1 2 1265 1071 288 28 11 chrX 89187257 89187619 -77462677 - Lx8 LINE L1 -658 6815 6448 2 1265 210 80 60 0 chrX 89187702 89187752 -77462544 + (TTTTTG)n Simple_repeat Simple_repeat 4 56 0 2 1265 402 182 18 18 chrX 89187774 89187802 -77462494 - L1_Mm LINE L1 -590 5296 5267 2 1265 974 110 20 14 chrX 89187802 89187949 -77462347 - B1_Mus1 SINE Alu 0 148 1 2 1265 443 146 12 1 chrX 89187949 89188047 -77462249 - L1_Mm LINE L1 -620 5266 5161 2 1265 1460 110 4 12 chrX 89188051 89188309 -77461987 - L1_Mm LINE L1 -434 5449 5194 2 1265 5845 89 5 1 chrX 89188313 89189111 -77461185 + L1_Mus1 LINE L1 5757 6557 -10 2 1265 7975 92 8 2 chrX 89189121 89190995 -77459301 - L1Md_F2 LINE L1 -10 6572 4685 2 1265 4587 164 34 152 chrX 89190994 89191918 -77458378 + L1_Mur2 LINE L1 3491 4225 -1652 2 1265 1326 91 27 0 chrX 89191918 89192105 -77458191 + B2_Mm2 SINE B2 2 193 -2 2 1265 4587 164 34 152 chrX 89192105 89192539 -77457757 + L1_Mur2 LINE L1 4226 4689 -1188 2 1265 480 256 33 0 chrX 89192626 89192747 -77457549 - Lx8 LINE L1 -1039 6434 6310 2 1265 312 286 101 13 chrX 89192838 89192987 -77457309 - L1MCa LINE L1 -2916 3648 3487 2 1265 397 284 7 7 chrX 89192987 89193122 -77457174 + Lx6 LINE L1 7283 7417 -43 2 1265 567 295 129 52 chrX 89193176 89193996 -77456300 - L1MCa LINE L1 -3121 3443 2561 2 1265 348 367 79 13 chrX 89194065 89194369 -77455927 - L1MCa LINE L1 -4634 2117 1794 2 1265 308 275 275 7 chrX 89194371 89194655 -77455641 - L1MCa LINE L1 -4895 1150 792 2 1265 277 286 47 9 chrX 89194730 89194836 -77455460 - L1MCa LINE L1 -5774 734 625 2 1265 457 374 92 55 chrX 89194903 89195390 -77454906 - L1MCa LINE L1 -5917 591 87 2 1265 3121 138 21 2 chrX 89195920 89196435 -77453861 - Lx2A LINE L1 0 7008 6484 2 1265 759 117 0 0 chrX 89196449 89196560 -77453736 - Lx2A1 LINE L1 -650 6358 6248 2 1265 681 300 95 35 chrX 89196767 89197220 -77453076 - Lx9 LINE L1 -22 7622 7143 2 1265 351 0 0 0 chrX 89197308 89197347 -77452949 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 1265 438 227 8 8 chrX 89198004 89198124 -77452172 - L1_Mur3 LINE L1 -1747 4133 4014 2 1265 1385 82 0 15 chrX 89198980 89199177 -77451119 - L1Md_F2 LINE L1 -2 6580 6387 2 1265 795 53 1 0 chrX 89199177 89199290 -77451006 + B2_Mm2 SINE B2 15 128 -65 2 1265 354 337 43 43 chrX 89199883 89200069 -77450227 - Lx6 LINE L1 -121 7339 7154 2 1265 2479 184 77 11 chrX 89200071 89200665 -77449631 - L1_Mur3 LINE L1 -3184 2696 2060 2 1265 216 0 0 0 chrX 89200665 89200689 -77449607 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1265 2479 184 77 11 chrX 89200689 89200714 -77449582 - L1_Mur3 LINE L1 -3821 2059 2036 2 1265 634 295 65 7 chrX 89201294 89201633 -77448663 - L1_Mur3 LINE L1 -6747 981 361 2 1265 257 108 0 0 chrX 89201907 89201944 -77448352 - L1Md_F3 LINE L1 -930 5654 5618 2 1265 6233 75 0 2 chrX 89201940 89202800 -77447496 + L1Md_F3 LINE L1 4729 5586 -297 2 1265 7529 63 11 11 chrX 89202801 89203787 -77446509 + L1Md_F2 LINE L1 5588 6573 -9 2 1265 262 202 109 55 chrX 89204016 89204126 -77446170 - Lx2B LINE L1 -3 6997 6882 2 1265 622 303 45 22 chrX 89204658 89204837 -77445459 + B4 SINE B4 44 226 -66 2 1265 25 0 0 0 chrX 89204938 89204963 -77445333 + AT_rich Low_complexity Low_complexity 1 25 0 2 1265 302 260 27 0 chrX 89205145 89205218 -77445078 + B4 SINE B4 214 288 -4 2 1265 384 103 0 0 chrX 89205218 89205276 -77445020 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 1265 1266 133 29 5 chrX 89205363 89205567 -77444729 - MTC LTR MaLR -8 413 205 2 1265 588 14 0 0 chrX 89205567 89205636 -77444660 + (CTTG)n Simple_repeat Simple_repeat 2 70 0 2 1265 1066 246 45 4 chrX 89206618 89206863 -77443433 - MTC LTR MaLR -166 255 1 2 1265 1106 128 0 11 chrX 89207236 89207410 -77442886 + Lx4A LINE L1 6435 6606 -452 2 1265 3881 49 2 0 chrX 89207429 89207901 -77442395 - L1_Mus1 LINE L1 0 6567 6095 2 1265 8074 28 1 2 chrX 89207925 89209013 -77441283 - L1Md_T LINE L1 -1 6581 5494 2 1265 2677 143 11 15 chrX 89209777 89210289 -77440007 + L1_Mus4 LINE L1 5101 5646 -990 2 1265 797 264 20 12 chrX 89210350 89210595 -77439701 - Lx7 LINE L1 -473 7223 6977 2 1265 622 193 13 100 chrX 89210601 89210751 -77439545 + ORR1C2 LTR MaLR 248 384 0 2 1265 31 44 0 0 chrX 89210879 89210924 -77439372 + AT_rich Low_complexity Low_complexity 1 45 0 2 1265 22 70 0 0 chrX 89211001 89211044 -77439252 + AT_rich Low_complexity Low_complexity 1 43 0 2 1265 267 267 0 0 chrX 89211465 89211611 -77438685 + (TA)n Simple_repeat Simple_repeat 2 147 0 2 1265 673 121 35 64 chrX 89211715 89211856 -77438440 - L1Md_F3 LINE L1 -2 6582 6446 2 1265 22 35 0 0 chrX 89211865 89211894 -77438402 + AT_rich Low_complexity Low_complexity 1 29 0 2 1265 8088 25 0 1 chrX 89212432 89213923 -77436373 - L1Md_T LINE L1 0 6582 5093 2 1265 3174 13 0 0 chrX 89213912 89214289 -77436007 + L1Md_T LINE L1 4694 5070 -813 2 1265 310 252 87 0 chrX 89214427 89214542 -77435754 - L1MCb LINE L1 -4715 2036 1912 2 1265 799 274 122 39 chrX 89214629 89215263 -77435033 - L1MCb LINE L1 -4895 1150 465 2 1265 477 0 0 0 chrX 89215389 89215442 -77434854 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 1265 459 0 0 0 chrX 89215442 89215492 -77434804 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1265 319 360 17 33 chrX 89215886 89216055 -77434241 - B4A SINE B4 -118 174 4 2 1265 23 0 0 0 chrX 89216236 89216259 -77434037 + AT_rich Low_complexity Low_complexity 1 23 0 2 1265 1695 63 0 0 chrX 89216356 89216578 -77433718 - L1Md_F2 LINE L1 -285 5598 5377 2 1265 7703 69 0 2 chrX 89216578 89217565 -77432731 + L1Md_F2 LINE L1 5592 6576 -6 2 1265 48 32 0 0 chrX 89217814 89217876 -77432420 + AT_rich Low_complexity Low_complexity 1 62 0 2 1265 274 245 103 84 chrX 89217945 89218052 -77432244 - MTD LTR MaLR -293 126 18 2 1265 1081 268 179 28 chrX 89218152 89218516 -77431780 - MTD LTR MaLR 0 419 1 2 1265 357 368 38 5 chrX 89218535 89218721 -77431575 - MLT1F-int LTR MaLR -322 1167 976 2 1265 183 80 0 0 chrX 89219429 89219454 -77430842 + (CATATA)n Simple_repeat Simple_repeat 6 30 0 2 1265 38 85 0 0 chrX 89220665 89220759 -77429537 + AT_rich Low_complexity Low_complexity 1 94 0 2 1265 198 0 0 0 chrX 89221167 89221189 -77429107 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 2 1265 2854 293 104 7 chrX 89222235 89223136 -77427160 + Lx8 LINE L1 6129 7117 -356 2 1265 239 198 40 119 chrX 89223146 89223272 -77427024 + Lx8 LINE L1 7358 7473 0 2 1265 404 296 68 26 chrX 89223527 89223718 -77426578 - RMER15 LTR ERVL -40 535 337 2 1265 5024 111 5 15 chrX 89224841 89225589 -77424707 - Lx LINE L1 0 6654 5914 2 1265 3036 86 0 5 chrX 89225589 89225987 -77424309 - MTA_Mm LTR MaLR 0 396 1 2 1265 2849 72 16 9 chrX 89225987 89226421 -77423875 - MTA_Mm-int LTR MaLR 0 1098 662 2 1265 2462 94 12 1 chrX 89226428 89226857 -77423439 - Lx LINE L1 -720 5916 5484 2 1265 293 277 9 38 chrX 89226955 89227032 -77423264 + MLT2B4 LTR ERVL 5 78 -478 2 1265 853 240 75 43 chrX 89227032 89227478 -77422818 + RMER2 LTR ERV1 1 563 -4 3 1265 1987 249 47 12 chrX 89227499 89228006 -77422290 + Lx7 LINE L1 6966 7490 -206 3 1265 2456 38 0 3 chrX 89228025 89228040 -77422256 + L1Md_F2 LINE L1 6102 6115 -467 3 1265 327 20 0 73 chrX 89228040 89228095 -77422201 - L1Md_F2 LINE L1 -8 6574 6524 3 1265 2456 38 0 3 chrX 89228095 89228366 -77421930 + L1Md_F2 LINE L1 6116 6386 -196 3 1265 257 289 36 0 chrX 89228393 89228476 -77421820 + Lx7 LINE L1 7606 7691 -5 3 1265 731 147 95 27 chrX 89228592 89228739 -77421557 + Lx4A LINE L1 6900 7056 -2 3 1265 24 0 0 0 chrX 89228740 89228764 -77421532 + AT_rich Low_complexity Low_complexity 1 24 0 3 1265 268 335 85 37 chrX 89228791 89228980 -77421316 + MLT2B4 LTR ERVL 290 487 -69 2 1265 3929 187 52 33 chrX 89229028 89229572 -77420724 - RMER13B LTR ERVK 0 908 376 3 1265 1039 88 0 14 chrX 89229572 89229711 -77420585 + B1_Mus1 SINE Alu 3 139 -9 3 1265 3929 187 52 33 chrX 89229711 89230052 -77420244 - RMER13B LTR ERVK -533 375 6 3 1265 617 332 79 7 chrX 89230071 89230362 -77419934 - MLT1A0 LTR MaLR -4 361 50 3 1265 335 189 40 0 chrX 89230769 89230843 -77419453 - RLTR21 LTR ERVK -155 1417 1341 3 1265 704 289 49 55 chrX 89230880 89231209 -77419087 - RMER12 LTR ERVK -178 1144 818 3 1265 564 95 0 0 chrX 89231209 89231293 -77419003 + (TA)n Simple_repeat Simple_repeat 2 85 0 3 1265 1823 129 13 10 chrX 89231299 89231611 -77418685 - RMER12 LTR ERVK -1009 313 1 3 1265 1181 190 0 0 chrX 89231611 89231806 -77418490 + Lx7 LINE L1 6539 6733 -963 3 1265 2813 198 105 94 chrX 89231820 89233006 -77417290 + RLTR25B LTR ERVK 11 1103 0 3 1265 2341 199 32 70 chrX 89233006 89233031 -77417265 + Lx7 LINE L1 6728 6752 -944 3 1265 3205 60 3 0 chrX 89233031 89233415 -77416881 - IAPEY_LTR LTR ERVK 0 385 1 3 1265 2341 199 32 70 chrX 89233415 89233990 -77416306 + Lx7 LINE L1 6753 7305 -391 3 1265 201 108 0 0 chrX 89233990 89234027 -77416269 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 3 1265 3357 99 7 0 chrX 89234028 89234491 -77415805 - L1_Mus1 LINE L1 -352 6215 5750 3 1265 1715 84 0 0 chrX 89234491 89234716 -77415580 + L1_Mus1 LINE L1 6342 6566 -1 3 1265 1339 180 70 77 chrX 89234739 89234750 -77415546 + Lx7 LINE L1 7297 7306 -390 3 1265 192 40 0 0 chrX 89234750 89234775 -77415521 + (CAA)n Simple_repeat Simple_repeat 2 26 0 3 1265 1339 180 70 77 chrX 89234775 89234881 -77415415 + Lx7 LINE L1 7307 7405 -291 3 1265 450 0 0 0 chrX 89234881 89234931 -77415365 + (TTTTG)n Simple_repeat Simple_repeat 4 53 0 3 1265 1339 180 70 77 chrX 89234931 89235215 -77415081 + Lx7 LINE L1 7406 7695 -1 3 1265 226 341 11 11 chrX 89235413 89235502 -77414794 + L1MEc LINE L1 141 229 -6171 3 1265 295 197 45 0 chrX 89235520 89235586 -77414710 + L1MEc LINE L1 789 857 -5543 3 1265 232 194 60 0 chrX 89235607 89235674 -77414622 + L1MA7 LINE L1 6221 6291 0 3 1265 234 304 41 65 chrX 89235692 89235815 -77414481 + PB1 SINE Alu 1 120 -7 3 1265 687 181 104 0 chrX 89237248 89237441 -77412855 - Lx9 LINE L1 0 7644 7432 3 1265 1602 203 46 25 chrX 89237445 89237839 -77412457 + RLTR9D LTR ERVK 1 402 -1 3 1265 732 261 55 65 chrX 89237845 89238152 -77412144 + ETnERV2-int LTR ERVK 3 306 -3008 3 1265 543 56 0 0 chrX 89238159 89238230 -77412066 + (TAAAA)n Simple_repeat Simple_repeat 1 71 0 3 1265 6729 108 69 14 chrX 89238230 89239331 -77410965 + ETnERV2-int LTR ERVK 1083 2244 -5162 3 1265 6864 131 38 9 chrX 89239322 89240479 -77409817 + ETnERV2-int LTR ERVK 2494 3683 -3723 3 1265 2033 13 0 0 chrX 89240479 89240709 -77409587 - L1_Mm LINE L1 -639 5244 5015 3 1265 3586 55 0 5 chrX 89240709 89241150 -77409146 + L1Md_T LINE L1 6143 6581 -1 3 1265 2639 120 33 0 chrX 89241151 89241550 -77408746 + ETnERV2-int LTR ERVK 3679 4090 -3316 3 1265 417 100 33 0 chrX 89241533 89241593 -77408703 + ETnERV2-int LTR ERVK 4596 4657 -2587 3 1265 4395 159 5 25 chrX 89241591 89242504 -77407792 + ETnERV2-int LTR ERVK 5579 6422 -984 3 1265 394 120 38 51 chrX 89242715 89242794 -77407502 + ETnERV2-int LTR ERVK 7327 7404 -2 3 1265 1608 184 117 25 chrX 89242795 89243163 -77407133 + RLTR9D LTR ERVK 1 402 -1 3 1265 1774 266 40 0 chrX 89243170 89243591 -77406705 - Lx9 LINE L1 -216 7428 6991 3 1265 867 202 17 0 chrX 89243592 89243765 -77406531 - B2_Mm2 SINE B2 -7 188 13 3 1265 533 255 41 41 chrX 89243765 89243937 -77406359 - Lx9 LINE L1 -719 6925 6754 3 1265 499 343 41 36 chrX 89243983 89244204 -77406092 + MTEb LTR MaLR 70 291 -88 3 1265 882 258 24 43 chrX 89244206 89244461 -77405835 - MTEa LTR MaLR -13 366 117 3 1265 591 284 7 13 chrX 89244791 89244941 -77405355 + B1_Mur1 SINE Alu 1 149 0 3 1265 24 0 0 0 chrX 89245082 89245106 -77405190 + AT_rich Low_complexity Low_complexity 1 24 0 3 1265 805 232 90 205 chrX 89245130 89245564 -77404732 - ORR1C2 LTR MaLR 0 384 1 3 1265 896 303 226 30 chrX 89245696 89246298 -77403998 - Lx7 LINE L1 -354 7342 6623 3 1265 3283 177 30 3 chrX 89246296 89246896 -77403400 - Lx4B LINE L1 -6 5871 5256 3 1265 6413 161 23 11 chrX 89246896 89248030 -77402266 + Lx4B LINE L1 5907 7053 -5 3 1265 475 342 58 0 chrX 89248034 89248224 -77402072 - Lx8 LINE L1 -830 6643 6443 3 1265 693 233 0 0 chrX 89249949 89250082 -77400214 - B1_Mur4 SINE Alu -13 137 5 3 1265 323 245 9 105 chrX 89249981 89250095 -77400201 - MT2B LTR ERVL -344 257 155 3 1265 198 103 0 0 chrX 89250393 89250422 -77399874 + (TTA)n Simple_repeat Simple_repeat 2 30 0 3 1265 644 267 59 0 chrX 89250677 89250864 -77399432 - RCHARR1 DNA MER1_type -727 247 50 3 1265 5623 69 5 29 chrX 89251647 89252470 -77397826 - RLTR13B4 LTR ERVK 0 803 1 3 1265 1536 48 16 0 chrX 89252569 89252758 -77397538 - B2_Mm1t SINE B2 -1 192 1 3 1265 284 259 126 27 chrX 89252944 89253055 -77397241 + MTEb LTR MaLR 258 379 0 3 1265 359 181 109 0 chrX 89253763 89253871 -77396425 - L1_Mur3 LINE L1 -6507 1205 1058 3 1265 7167 48 3 0 chrX 89253872 89254729 -77395567 - L1Md_F2 LINE L1 -12 6570 5711 3 1265 228 269 35 96 chrX 89254702 89254756 -77395540 - L1_Mur3 LINE L1 -6563 1149 1097 3 1265 450 36 0 0 chrX 89254756 89254812 -77395484 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1265 228 269 35 96 chrX 89254812 89254872 -77395424 - L1_Mur3 LINE L1 -6616 1096 1043 3 1265 3157 181 45 11 chrX 89254872 89255493 -77394803 + RLTR26 LTR ERVK 1 642 0 3 1265 1915 272 130 18 chrX 89255493 89256392 -77393904 - L1_Mur3 LINE L1 -6664 1048 49 3 1265 929 257 14 89 chrX 89256378 89256477 -77393819 - Lx8 LINE L1 -108 7365 7285 3 1265 1423 212 93 48 chrX 89256477 89256898 -77393398 + RMER10A LTR ERVL 3 442 0 3 1265 929 257 14 89 chrX 89256898 89257080 -77393216 - Lx8 LINE L1 -189 7284 7105 3 1265 593 292 107 11 chrX 89257489 89257852 -77392444 - L1MA6 LINE L1 -1 6299 5902 3 1265 1631 16 27 0 chrX 89258771 89258957 -77391339 - B2_Mm1a SINE B2 -2 191 1 3 1265 890 177 177 0 chrX 89258957 89259138 -77391158 - B3 SINE B2 -2 214 2 3 1266 7048 59 31 1 chrX 89287707 89288635 -77361661 - L1_Mm LINE L1 -1557 4326 3371 3 1266 4376 79 0 0 chrX 89288709 89289306 -77360990 + L1_Mm LINE L1 2759 3355 -2528 3 1266 1301 111 15 0 chrX 89289715 89289914 -77360382 + L1_Mus3 LINE L1 6435 6636 -2 3 1266 4360 83 2 9 chrX 89291029 89291590 -77358706 + L1_Mus1 LINE L1 6011 6567 0 3 1266 278 360 31 79 chrX 89291741 89291888 -77358408 + MLT1A0 LTR MaLR 1 140 -225 3 1266 1364 104 0 40 chrX 89291888 89292088 -77358208 + B2_Mm2 SINE B2 2 193 -2 3 1266 278 360 31 79 chrX 89292088 89292257 -77358039 + MLT1A0 LTR MaLR 141 302 -63 3 1266 211 162 0 0 chrX 89292494 89292531 -77357765 + MIRc SINE MIR 148 184 -84 3 1266 639 0 0 0 chrX 89292610 89292681 -77357615 + (TTTC)n Simple_repeat Simple_repeat 4 74 0 3 1266 1045 314 7 24 chrX 89293035 89293329 -77356967 + B4 SINE B4 1 289 -3 3 1266 507 90 0 0 chrX 89293362 89293440 -77356856 + (GA)n Simple_repeat Simple_repeat 1 78 0 3 1266 477 0 0 0 chrX 89293579 89293632 -77356664 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 1266 450 0 0 0 chrX 89293632 89293681 -77356615 + (GA)n Simple_repeat Simple_repeat 2 51 0 3 1266 745 148 171 28 chrX 89296055 89296236 -77354060 + Lx3B LINE L1 6763 6969 -4 3 1266 808 70 0 0 chrX 89296599 89296699 -77353597 - L1_Mus2 LINE L1 -289 6277 6178 3 1266 2314 71 0 3 chrX 89296700 89296984 -77353312 + L1_Mus2 LINE L1 6283 6565 -1 3 1266 788 109 9 0 chrX 89297237 89297347 -77352949 - L1_Mus1 LINE L1 -126 6441 6331 3 1266 393 213 0 0 chrX 89297427 89297535 -77352761 + T-rich Low_complexity Low_complexity 1 108 0 3 1266 341 86 17 0 chrX 89298165 89298223 -77352073 + (TTG)n Simple_repeat Simple_repeat 2 60 0 3 1266 1205 69 0 0 chrX 89298223 89298368 -77351928 - B1_Mm SINE Alu -2 145 1 3 1266 7532 30 1 0 chrX 89299407 89300234 -77350062 + L1Md_T LINE L1 5753 6580 -2 3 1266 1290 118 16 26 chrX 89300238 89300429 -77349867 - B2_Mm2 SINE B2 -6 189 1 3 1266 307 330 44 58 chrX 89301006 89301212 -77349084 - RMER17C LTR ERVK -46 364 162 3 1266 709 73 9 9 chrX 89301214 89301324 -77348972 + (GA)n Simple_repeat Simple_repeat 2 111 0 3 1266 521 362 34 58 chrX 89301902 89302110 -77348186 + B4A SINE B4 5 213 -79 3 1266 1674 211 40 59 chrX 89302110 89302483 -77347813 + ORR1D2 LTR MaLR 5 370 0 3 1266 521 362 34 58 chrX 89302483 89302567 -77347729 + B4A SINE B4 214 290 -2 3 1266 468 0 0 0 chrX 89302605 89302657 -77347639 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 1266 25 65 0 0 chrX 89303217 89303263 -77347033 + AT_rich Low_complexity Low_complexity 1 46 0 3 1266 38 51 0 0 chrX 89303296 89303355 -77346941 + AT_rich Low_complexity Low_complexity 1 59 0 3 1266 1466 268 55 68 chrX 89303363 89303835 -77346461 - Lx7 LINE L1 0 7460 6995 3 1266 450 303 25 0 chrX 89304226 89304348 -77345948 - RMER20B LTR ERVK -502 125 1 3 1266 7507 190 81 88 chrX 89304355 89305928 -77344368 - Lx7 LINE L1 -817 6879 5282 3 1266 718 217 0 0 chrX 89305928 89306057 -77344239 + B2_Mm2 SINE B2 1 129 -66 3 1266 7507 190 81 88 chrX 89306057 89307338 -77342958 - Lx7 LINE L1 -2415 5281 3981 3 1266 2186 67 33 20 chrX 89307338 89307641 -77342655 - IAPLTR2b LTR ERVK -20 307 1 3 1266 7507 190 81 88 chrX 89307641 89309222 -77341074 - Lx7 LINE L1 -817 3980 2371 3 1266 4136 105 34 22 chrX 89309222 89309807 -77340489 - Lx LINE L1 -7 6647 6056 3 1266 5757 243 143 122 chrX 89309807 89310467 -77339829 - Lx7 LINE L1 -3516 2370 1466 3 1266 390 199 272 12 chrX 89310489 89310605 -77339691 - Lx9 LINE L1 0 7644 7517 3 1266 210 37 0 0 chrX 89310605 89310632 -77339664 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1266 390 199 272 12 chrX 89310632 89310688 -77339608 - Lx9 LINE L1 -128 7516 7427 3 1266 6353 140 59 18 chrX 89310702 89311757 -77338539 - Lx3B LINE L1 -3 6970 5873 3 1266 1553 122 0 71 chrX 89311757 89312039 -77338257 + L1_Mur1 LINE L1 4973 5234 -652 3 1266 432 0 0 0 chrX 89312049 89312097 -77338199 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1266 4291 184 71 31 chrX 89312097 89313145 -77337151 - L1_Mur3 LINE L1 -4486 1394 298 3 1266 222 378 0 12 chrX 89313254 89313337 -77336959 - B3A SINE B2 -24 174 93 3 1266 228 86 0 0 chrX 89313520 89313555 -77336741 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3 1266 3404 55 3 0 chrX 89313789 89314173 -77336123 - IAPEY_LTR LTR ERVK 0 385 1 3 1266 22148 47 7 4 chrX 89314173 89316876 -77333420 - IAPEy-int LTR ERVK 0 7513 4804 3 1266 6140 103 56 11 chrX 89316876 89317807 -77332489 - IAPEy-int LTR ERVK -6455 1058 86 3 1266 761 244 75 35 chrX 89317844 89318044 -77332252 - B3 SINE B2 -8 208 1 3 1266 7170 86 43 6 chrX 89318232 89319621 -77330675 - Lx3_Mus LINE L1 -735 6274 4845 3 1266 5083 124 14 0 chrX 89319621 89320337 -77329959 + Lx3A LINE L1 6253 6978 -3 3 1266 192 77 0 0 chrX 89320661 89320687 -77329609 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1266 28 0 0 0 chrX 89321419 89321447 -77328849 + AT_rich Low_complexity Low_complexity 1 28 0 3 1266 3033 120 9 13 chrX 89321448 89321896 -77328400 - Lx3A LINE L1 -7 6974 6529 3 1266 2017 224 133 22 chrX 89322078 89322621 -77327675 + RMER20B LTR ERVK 1 603 -24 3 1266 886 212 16 21 chrX 89322622 89322729 -77327567 - Lx7 LINE L1 -596 7100 6992 4 1266 216 0 0 0 chrX 89322729 89322753 -77327543 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1266 936 59 101 0 chrX 89322755 89322874 -77327422 - B1_Mus1 SINE Alu -13 135 5 4 1266 886 212 16 21 chrX 89322874 89322951 -77327345 - Lx7 LINE L1 -705 6991 6914 4 1266 230 329 41 0 chrX 89323032 89323178 -77327118 + CT-rich Low_complexity Low_complexity 5 156 0 4 1266 232 213 0 0 chrX 89323227 89323274 -77327022 + MLT1A1 LTR MaLR 300 346 -62 4 1266 1289 89 72 0 chrX 89323320 89323500 -77326796 - B2_Mm1t SINE B2 0 193 1 4 1266 21 57 0 0 chrX 89323840 89323875 -77326421 + AT_rich Low_complexity Low_complexity 1 35 0 4 1266 3743 196 51 65 chrX 89323886 89324803 -77325493 + RMER13B LTR ERVK 1 904 -4 4 1266 22 0 0 0 chrX 89324827 89324849 -77325447 + AT_rich Low_complexity Low_complexity 1 22 0 4 1266 243 241 19 0 chrX 89326543 89326597 -77323699 + Lx9 LINE L1 7275 7329 -315 4 1266 284 301 0 0 chrX 89327577 89327660 -77322636 - Lx9 LINE L1 -327 7317 7235 4 1266 353 217 25 8 chrX 89327788 89327909 -77322387 + Lx9 LINE L1 7520 7642 -2 4 1266 498 33 0 0 chrX 89328128 89328188 -77322108 + (TTTTG)n Simple_repeat Simple_repeat 3 62 0 4 1266 1185 67 0 0 chrX 89328188 89328323 -77321973 - B1_Mus2 SINE Alu -11 136 2 4 1266 1213 55 0 33 chrX 89328361 89328498 -77321798 + B1_Mus2 SINE Alu 2 138 -9 4 1266 290 24 48 0 chrX 89328498 89328540 -77321756 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 4 1266 1213 55 0 33 chrX 89328540 89328553 -77321743 + B1_Mus2 SINE Alu 139 147 0 4 1266 797 244 22 87 chrX 89329937 89330166 -77320130 - B3 SINE B2 0 216 3 4 1266 759 22 0 0 chrX 89330275 89330364 -77319932 + (TTC)n Simple_repeat Simple_repeat 2 90 0 4 1266 237 329 14 14 chrX 89330386 89330457 -77319839 - ID4_ SINE ID -9 74 4 4 1266 280 372 29 14 chrX 89330478 89330617 -77319679 - B1F SINE Alu -8 141 1 4 1266 18547 54 1 3 chrX 89330703 89333690 -77316606 - L1Md_F2 LINE L1 0 6582 3603 4 1266 719 236 0 83 chrX 89333690 89333847 -77316449 - B1_Mur1 SINE Alu -3 146 3 4 1266 263 355 91 37 chrX 89333902 89334089 -77316207 + MLT1A0 LTR MaLR 137 333 -32 4 1266 1075 117 0 0 chrX 89334292 89334437 -77315859 - B1_Mus2 SINE Alu -1 146 2 4 1266 2028 276 40 127 chrX 89334922 89335207 -77315089 - Lx6 LINE L1 -27 7433 7155 4 1266 315 0 0 0 chrX 89335207 89335242 -77315054 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 1266 2028 276 40 127 chrX 89335242 89335955 -77314341 - Lx6 LINE L1 -306 7154 6523 4 1266 1228 263 19 19 chrX 89335968 89336044 -77314252 - Lx6 LINE L1 -1204 6256 6183 4 1266 2274 128 25 8 chrX 89336044 89336405 -77313891 + ORR1B2 LTR MaLR 1 367 0 4 1266 1228 263 19 19 chrX 89336405 89336646 -77313650 - Lx6 LINE L1 -1278 6182 5939 4 1266 375 198 155 10 chrX 89336635 89336732 -77313564 + Lx6 LINE L1 5833 5943 -1517 4 1266 674 293 125 48 chrX 89336774 89337086 -77313210 + MLT1B LTR MaLR 53 388 -2 4 1266 418 204 117 11 chrX 89337252 89337337 -77312959 - PB1D9 SINE Alu -7 113 19 4 1266 4129 123 28 2 chrX 89337337 89337971 -77312325 - L1_Mus3 LINE L1 -16 6622 5972 4 1266 387 0 0 0 chrX 89338139 89338182 -77312114 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1266 451 120 57 0 chrX 89338591 89338661 -77311635 - Lx LINE L1 -186 6468 6407 4 1266 642 91 0 18 chrX 89338662 89338774 -77311522 + L1_Mus4 LINE L1 6520 6629 -7 4 1266 625 309 115 32 chrX 89341367 89341705 -77308591 - Lx8 LINE L1 -3 7470 7105 4 1266 1141 70 0 31 chrX 89342811 89342974 -77307322 + L1_Mus1 LINE L1 6410 6567 0 4 1266 996 96 0 0 chrX 89343509 89343644 -77306652 + B1_Mus2 SINE Alu 13 147 0 4 1266 849 31 0 0 chrX 89343858 89343956 -77306340 + L1Md_A LINE L1 5488 5585 -298 4 1266 8563 27 0 0 chrX 89343957 89344953 -77305343 + L1Md_A LINE L1 5587 6582 0 4 1266 387 60 0 0 chrX 89346236 89346286 -77304010 + (T)n Simple_repeat Simple_repeat 1 50 0 4 1266 237 322 0 0 chrX 89346286 89346345 -77303951 - B1F SINE Alu -90 59 1 4 1266 296 211 37 0 chrX 89347120 89347192 -77303104 - ORR1E LTR MaLR -266 93 17 4 1266 8191 52 1 0 chrX 89347199 89348885 -77301411 - L1Md_F2 LINE L1 -13 6569 4883 4 1266 1163 49 0 0 chrX 89349040 89349182 -77301114 - B1_Mus1 SINE Alu -5 143 2 4 1266 933 237 23 46 chrX 89349298 89349515 -77300781 - B3 SINE B2 -2 214 3 4 1266 364 303 101 17 chrX 89349610 89349788 -77300508 - L1M5 LINE L1 -2970 3176 2984 4 1266 1049 178 40 10 chrX 89350855 89351054 -77299242 + Lx4A LINE L1 6845 7049 -9 4 1266 21 82 0 0 chrX 89351586 89351635 -77298661 + AT_rich Low_complexity Low_complexity 1 49 0 4 1266 349 330 58 16 chrX 89351823 89352131 -77298165 + L1M5 LINE L1 4536 4856 -1290 4 1266 812 46 19 0 chrX 89352518 89352626 -77297670 + (TTTTC)n Simple_repeat Simple_repeat 3 112 0 4 1266 1286 44 0 16 chrX 89352628 89352811 -77297485 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 4 1266 1137 75 0 0 chrX 89352813 89352987 -77297309 + (TCCTG)n Simple_repeat Simple_repeat 2 175 0 4 1266 1226 43 15 21 chrX 89352988 89353160 -77297136 + (TCTCC)n Simple_repeat Simple_repeat 1 173 -156 4 1266 1226 43 15 21 chrX 89353166 89353320 -77296976 + (TCTCC)n Simple_repeat Simple_repeat 174 329 0 4 1266 213 128 0 25 chrX 89353320 89353353 -77296943 + polypyrimidine Low_complexity Low_complexity 4 36 0 4 1266 7101 50 1 0 chrX 89353360 89354220 -77296076 - L1Md_F2 LINE L1 -17 6565 5705 4 1266 1083 78 0 0 chrX 89354217 89354358 -77295938 + L1_Mm LINE L1 5060 5200 -683 4 1266 314 262 51 143 chrX 89354408 89354604 -77295692 - L1M2 LINE L1 -957 5186 5009 4 1266 250 314 27 55 chrX 89354734 89354990 -77295306 - L1_Mur3 LINE L1 -4116 1764 1516 4 1266 794 264 50 0 chrX 89355111 89355312 -77294984 + B3 SINE B2 1 211 -5 4 1266 733 24 0 0 chrX 89356997 89357081 -77293215 - L1Md_F2 LINE L1 -504 6078 5995 4 1266 4037 30 2 0 chrX 89357081 89357555 -77292741 + L1Md_F2 LINE L1 6093 6567 -15 4 1266 1214 222 112 11 chrX 89358024 89358398 -77291898 - Lx9 LINE L1 0 7644 7233 4 1266 697 272 85 4 chrX 89358522 89358780 -77291516 + MER67C LTR ERV1 364 642 -69 4 1266 975 320 135 12 chrX 89358784 89359214 -77291082 + MER92B LTR ERV1 7 489 -147 4 1266 637 263 7 0 chrX 89359358 89359495 -77290801 - B3 SINE B2 0 216 79 4 1266 27 0 0 0 chrX 89359534 89359561 -77290735 + AT_rich Low_complexity Low_complexity 1 27 0 4 1266 1279 288 53 62 chrX 89359738 89360133 -77290163 + Lx8 LINE L1 6923 7315 -158 4 1266 3902 128 14 0 chrX 89360133 89360717 -77289579 + Lx3B LINE L1 6377 6968 -5 4 1266 1279 288 53 62 chrX 89360717 89360851 -77289445 + Lx8 LINE L1 7316 7447 -26 4 1266 270 116 0 0 chrX 89360878 89360921 -77289375 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 1266 363 352 21 7 chrX 89360999 89361142 -77289154 + B1_Mur2 SINE Alu 2 146 -3 4 1266 1655 96 34 0 chrX 89361645 89361884 -77288412 + L1_Mus3 LINE L1 6386 6632 -6 4 1266 613 301 39 0 chrX 89362215 89362368 -77287928 - B4 SINE B4 -8 284 126 4 1266 1296 88 10 20 chrX 89362582 89362779 -77287517 - L1_Mus3 LINE L1 -5 6633 6439 4 1266 408 216 0 0 chrX 89362779 89362853 -77287443 - B3A SINE B2 -121 77 4 4 1266 291 302 138 0 chrX 89363125 89363241 -77287055 - MER2 DNA MER2_type -208 137 6 4 1266 519 201 60 0 chrX 89363325 89363474 -77286822 - Lx5 LINE L1 0 7050 6893 4 1266 315 0 0 0 chrX 89363699 89363734 -77286562 + (TTA)n Simple_repeat Simple_repeat 2 36 0 4 1266 22 0 0 0 chrX 89363736 89363758 -77286538 + AT_rich Low_complexity Low_complexity 1 22 0 4 1266 284 0 0 27 chrX 89363957 89363994 -77286302 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 4 1266 291 303 0 84 chrX 89364016 89364135 -77286161 - Lx7 LINE L1 -398 7298 7190 4 1266 28 0 0 0 chrX 89364485 89364513 -77285783 + AT_rich Low_complexity Low_complexity 1 28 0 4 1266 360 229 198 0 chrX 89364515 89364611 -77285685 - Lx8 LINE L1 -151 7322 7208 4 1266 233 305 32 0 chrX 89366982 89367077 -77283219 - L1MA6 LINE L1 -27 6273 6176 4 1266 255 280 33 22 chrX 89367619 89367731 -77282565 - MTE2a LTR MaLR -17 362 246 4 1266 280 319 0 0 chrX 89367984 89368056 -77282240 + ID4_ SINE ID 2 73 -10 4 1266 740 180 16 53 chrX 89368160 89368358 -77281938 + Lx3B LINE L1 6785 6979 -2 4 1266 216 0 0 0 chrX 89368498 89368522 -77281774 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 4 1266 1224 96 6 6 chrX 89368522 89368700 -77281596 - B2_Mm1a SINE B2 -14 179 2 4 1266 22 0 0 0 chrX 89368861 89368883 -77281413 + AT_rich Low_complexity Low_complexity 1 22 0 4 1266 1119 36 43 0 chrX 89368915 89369055 -77281241 + B1_Mus2 SINE Alu 2 147 0 4 1266 21 0 0 0 chrX 89369373 89369394 -77280902 + AT_rich Low_complexity Low_complexity 1 21 0 4 1266 1222 210 69 65 chrX 89369809 89370115 -77280181 - Lx5 LINE L1 0 7050 6744 4 1266 565 224 41 14 chrX 89370273 89370418 -77279878 - L1Md_F LINE L1 -5732 787 639 4 1266 5342 95 36 3 chrX 89370417 89370482 -77279814 + L1_Mus1 LINE L1 5074 5138 -745 4 1266 3384 79 0 11 chrX 89370482 89370956 -77279340 + L1Md_F3 LINE L1 6116 6584 0 4 1266 7213 82 17 7 chrX 89370956 89372358 -77277938 + L1_Mus1 LINE L1 5139 6565 -2 4 1266 228 338 0 0 chrX 89372507 89372578 -77277718 - L2 LINE L2 -561 2858 2788 4 1266 24 53 0 0 chrX 89373351 89373389 -77276907 + AT_rich Low_complexity Low_complexity 1 38 0 4 1266 369 201 38 8 chrX 89373469 89373593 -77276703 - L1_Rod LINE L1 -790 5353 5160 4 1266 340 324 7 35 chrX 89373703 89373842 -77276454 + B1_Mur2 SINE Alu 15 135 -14 4 1266 1257 80 0 0 chrX 89373842 89374017 -77276279 + (GAAA)n Simple_repeat Simple_repeat 1 175 0 4 1266 303 333 0 123 chrX 89374017 89374031 -77276265 + B1F SINE Alu 136 149 0 4 1266 8076 42 9 1 chrX 89374266 89375557 -77274739 - L1Md_F2 LINE L1 -3 6579 5280 4 1266 3321 88 4 4 chrX 89375557 89376011 -77274285 + L1Md_F2 LINE L1 4802 5255 -628 4 1266 29 28 0 0 chrX 89376054 89376090 -77274206 + AT_rich Low_complexity Low_complexity 1 36 0 4 1266 23 78 0 0 chrX 89376218 89376269 -77274027 + AT_rich Low_complexity Low_complexity 1 51 0 4 1266 2685 127 9 5 chrX 89376356 89376784 -77273512 - Lx3B LINE L1 -3 6970 6541 4 1266 826 78 106 23 chrX 89376950 89377082 -77273214 - ORR1A1 LTR MaLR -8 338 196 4 1266 2110 95 49 0 chrX 89377089 89377393 -77272903 - ORR1A2 LTR MaLR -8 319 1 5 1266 477 280 51 20 chrX 89377604 89377859 -77272437 - L1M3 LINE L1 -736 5561 5299 5 1266 280 250 88 40 chrX 89377891 89378016 -77272280 - L1M2 LINE L1 -694 5606 5476 5 1266 29 101 0 0 chrX 89378076 89378175 -77272121 + AT_rich Low_complexity Low_complexity 1 99 0 5 1266 575 278 85 59 chrX 89378339 89378362 -77271934 - L1_Rod LINE L1 -605 5242 5221 5 1266 2424 89 3 53 chrX 89378362 89378742 -77271554 - L1_Mus4 LINE L1 -2 6634 6274 5 1266 575 278 85 59 chrX 89378742 89379024 -77271272 - L1_Rod LINE L1 -627 5220 4929 5 1266 642 244 195 29 chrX 89379202 89379586 -77270710 - L1M3 LINE L1 -1141 4999 4552 5 1266 2374 295 62 30 chrX 89379672 89380632 -77269664 - Lx7 LINE L1 -876 6820 5831 5 1266 881 251 68 34 chrX 89380637 89380901 -77269395 + Lx7 LINE L1 6817 7089 -607 5 1266 356 281 58 58 chrX 89380926 89381058 -77269238 - L1M3 LINE L1 -2600 3247 3111 5 1266 1168 88 0 0 chrX 89381058 89381206 -77269090 - B1_Mus1 SINE Alu 0 148 1 5 1266 356 272 53 53 chrX 89381206 89381252 -77269044 - L1M3 LINE L1 -3023 3120 3075 5 1266 414 0 0 0 chrX 89381252 89381298 -77268998 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1266 356 274 54 54 chrX 89381298 89381447 -77268849 - L1M3 LINE L1 -3069 3074 2919 5 1266 595 311 51 78 chrX 89381582 89381776 -77268520 - B4A SINE B4 -6 286 108 5 1266 414 0 0 0 chrX 89381776 89381822 -77268474 + (TATG)n Simple_repeat Simple_repeat 3 48 0 5 1266 595 311 51 78 chrX 89381822 89381920 -77268376 - B4A SINE B4 -185 107 4 5 1266 352 258 7 44 chrX 89381926 89382084 -77268212 - L1M3 LINE L1 -2954 2893 2711 5 1266 205 175 0 24 chrX 89382086 89382127 -77268169 + (TTG)n Simple_repeat Simple_repeat 3 42 0 5 1266 587 236 18 9 chrX 89382663 89382774 -77267522 - RSINE1 SINE B4 -33 132 21 5 1266 845 261 209 41 chrX 89382951 89383314 -77266982 - Lx9 LINE L1 -5 7639 7216 5 1266 1066 80 0 0 chrX 89383755 89383892 -77266404 - B1_Mus1 SINE Alu -11 137 1 5 1266 207 0 0 0 chrX 89383922 89383945 -77266351 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1266 812 245 47 16 chrX 89383951 89384142 -77266154 + B3 SINE B2 19 215 -1 5 1266 27 29 0 0 chrX 89384262 89384296 -77266000 + AT_rich Low_complexity Low_complexity 1 34 0 5 1266 249 275 14 0 chrX 89385004 89385073 -77265223 + (TATG)n Simple_repeat Simple_repeat 2 71 0 5 1266 2650 218 73 21 chrX 89385144 89385912 -77264384 + L1_Mus1 LINE L1 108 950 -5666 5 1266 360 0 0 0 chrX 89385912 89385952 -77264344 + (TAA)n Simple_repeat Simple_repeat 3 42 0 5 1266 22278 125 17 11 chrX 89385952 89388492 -77261804 + L1_Mus1 LINE L1 946 3476 -2407 5 1266 195 42 0 0 chrX 89388492 89388516 -77261780 + (CAA)n Simple_repeat Simple_repeat 1 24 0 5 158 22278 110 14 6 chrX 89388516 89391559 -77258737 + L1_Mus1 LINE L1 3477 6567 0 5 1267 21 0 0 0 chrX 89391696 89391717 -77258579 + AT_rich Low_complexity Low_complexity 1 21 0 5 1267 1904 31 0 0 chrX 89391845 89392067 -77258229 + L1Md_F2 LINE L1 5365 5586 -297 5 1267 7780 51 13 1 chrX 89392067 89393049 -77257247 + L1Md_F2 LINE L1 5587 6580 -2 5 1267 1016 313 60 42 chrX 89394166 89394981 -77255315 - L1M2 LINE L1 -803 5340 4507 5 1267 261 57 0 0 chrX 89394981 89395016 -77255280 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1267 1016 313 60 42 chrX 89395016 89395111 -77255185 - L1M2 LINE L1 -1637 4506 4414 5 1267 6149 73 1 1 chrX 89395194 89395991 -77254305 - L1_Mus1 LINE L1 0 6567 5771 5 1267 465 66 0 0 chrX 89396708 89396769 -77253527 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 1267 3491 107 98 5 chrX 89396840 89397423 -77252873 - Lx2 LINE L1 -2 6995 6359 5 1267 344 327 129 13 chrX 89397423 89397578 -77252718 - MLT1E3 LTR MaLR -172 452 280 5 1267 570 98 0 0 chrX 89397580 89397662 -77252634 + (TTC)n Simple_repeat Simple_repeat 3 84 0 5 1267 862 200 41 21 chrX 89397874 89398068 -77252228 - Lx4B LINE L1 -7 7051 6854 5 1267 1047 178 65 14 chrX 89398064 89398280 -77252016 + Lx4B LINE L1 6610 6836 -222 5 1267 21 57 0 0 chrX 89398579 89398614 -77251682 + AT_rich Low_complexity Low_complexity 1 35 0 5 1267 21 71 0 0 chrX 89398805 89398847 -77251449 + AT_rich Low_complexity Low_complexity 1 42 0 5 1267 1076 318 67 7 chrX 89398961 89399230 -77251066 - B4A SINE B4 0 292 8 5 1267 246 238 81 23 chrX 89399446 89399532 -77250764 - L1MC4a LINE L1 -198 7684 7594 5 1267 277 253 29 78 chrX 89400212 89400315 -77249981 + LTR40c LTR ERVL 2 99 -366 5 1267 528 16 0 0 chrX 89401119 89401180 -77249116 + (TG)n Simple_repeat Simple_repeat 1 61 0 5 1267 241 228 63 32 chrX 89401181 89401276 -77249020 - Charlie1b DNA MER1_type -143 380 283 5 1267 252 338 63 7 chrX 89401317 89401460 -77248836 - Charlie1b DNA MER1_type -314 209 59 5 1267 23 0 0 0 chrX 89402038 89402061 -77248235 + AT_rich Low_complexity Low_complexity 1 23 0 5 1267 2972 106 11 17 chrX 89402794 89402965 -77247331 + L1_Mm LINE L1 5055 5225 -658 5 1267 7536 33 32 2 chrX 89402965 89403867 -77246429 + RLTR13B3 LTR ERVK 1 929 0 5 1267 2972 106 11 17 chrX 89403867 89404094 -77246202 + L1_Mm LINE L1 5226 5446 -437 5 1267 7330 37 0 0 chrX 89404094 89404962 -77245334 + L1Md_F2 LINE L1 5703 6570 -12 5 1267 2972 106 11 17 chrX 89404962 89405032 -77245264 + L1_Mm LINE L1 5447 5520 -363 5 1267 796 106 9 0 chrX 89405161 89405274 -77245022 + B1_Mus1 SINE Alu 35 148 0 5 1267 198 118 0 0 chrX 89405277 89405311 -77244985 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1267 285 339 89 0 chrX 89406162 89406286 -77244010 - LTR16D2 LTR ERVL -39 533 399 5 1267 232 367 11 11 chrX 89406290 89406381 -77243915 - LTR16D2 LTR ERVL -582 93 3 5 1267 239 387 104 14 chrX 89406534 89406678 -77243618 + ORR1E LTR MaLR 19 175 -184 5 1267 401 299 26 90 chrX 89407167 89407516 -77242780 + L1MEf LINE L1 2124 2452 -3763 5 1267 511 102 11 11 chrX 89407862 89407951 -77242345 + (CA)n Simple_repeat Simple_repeat 1 89 0 5 1267 711 294 86 44 chrX 89408338 89408788 -77241508 + Tigger7 DNA MER2_type 2175 2457 -34 5 1267 419 346 58 68 chrX 89408806 89409116 -77241180 - MLT1A LTR MaLR -2 372 66 5 1267 25 0 0 0 chrX 89409180 89409205 -77241091 + AT_rich Low_complexity Low_complexity 1 25 0 5 1267 405 315 54 0 chrX 89409458 89409588 -77240708 + Lx8 LINE L1 7101 7237 -236 5 1267 304 337 77 33 chrX 89409666 89409847 -77240449 + Lx8 LINE L1 7230 7418 -55 5 1267 620 311 6 0 chrX 89409919 89410099 -77240197 - B3A SINE B2 -16 182 2 5 1267 966 31 8 0 chrX 89411597 89411727 -77238569 + L1Md_T LINE L1 6451 6581 -1 5 1267 246 125 0 0 chrX 89411744 89411792 -77238504 + (A)n Simple_repeat Simple_repeat 1 48 0 5 1267 1213 230 96 96 chrX 89412016 89412507 -77237789 - Lx7 LINE L1 -1 7695 7205 5 1267 7576 63 11 5 chrX 89412499 89413941 -77236355 - L1Md_F2 LINE L1 0 6582 5133 5 1267 3854 65 0 0 chrX 89413928 89414437 -77235859 + L1_Mm LINE L1 3829 4337 -1546 5 1267 2207 229 107 25 chrX 89414432 89415067 -77235229 - Lx7 LINE L1 -472 7224 6538 5 1267 22 0 0 0 chrX 89415661 89415683 -77234613 + AT_rich Low_complexity Low_complexity 1 22 0 5 1267 5222 50 0 0 chrX 89415758 89416402 -77233894 + L1Md_F3 LINE L1 5925 6568 -16 5 1267 21 71 0 0 chrX 89416771 89416813 -77233483 + AT_rich Low_complexity Low_complexity 1 42 0 5 1267 306 0 0 0 chrX 89416911 89416945 -77233351 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1267 528 81 0 0 chrX 89416945 89417019 -77233277 + (GA)n Simple_repeat Simple_repeat 2 75 0 5 1267 647 227 9 0 chrX 89417064 89417200 -77233096 + ORR1D1 LTR MaLR 27 157 -210 5 1267 37 0 0 0 chrX 89417293 89417330 -77232966 + AT_rich Low_complexity Low_complexity 1 37 0 5 1267 601 295 73 28 chrX 89417912 89418090 -77232206 + ID_B1 SINE B4 39 224 0 5 1267 25 31 0 0 chrX 89418243 89418275 -77232021 + AT_rich Low_complexity Low_complexity 1 32 0 5 1267 644 96 9 37 chrX 89418795 89418903 -77231393 + B1_Mur3 SINE Alu 45 149 0 5 1267 699 364 51 56 chrX 89419412 89419825 -77230471 - MLT1D LTR MaLR -94 411 1 5 1267 22 0 0 0 chrX 89420489 89420511 -77229785 + AT_rich Low_complexity Low_complexity 1 22 0 5 1267 2980 128 60 6 chrX 89421283 89421787 -77228509 - Lx LINE L1 -2 6652 6122 5 1267 261 0 0 0 chrX 89422616 89422645 -77227651 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1267 369 0 0 0 chrX 89422645 89422685 -77227611 + (GA)n Simple_repeat Simple_repeat 2 42 0 5 1267 536 355 23 6 chrX 89424202 89424375 -77225921 + B3A SINE B2 1 176 -22 5 1267 277 329 71 0 chrX 89424410 89424495 -77225801 - Lx8 LINE L1 -157 7316 7226 5 1267 2668 215 59 24 chrX 89424525 89425198 -77225098 - Lx9 LINE L1 -2 7642 6946 5 1267 424 188 24 0 chrX 89425193 89425278 -77225018 + Lx9 LINE L1 6737 6823 -821 5 1267 323 281 0 0 chrX 89425312 89425376 -77224920 + B3A SINE B2 2 65 -133 5 1267 468 35 0 0 chrX 89425379 89425437 -77224859 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 1267 871 268 58 47 chrX 89425519 89425793 -77224503 + RMER1A Other Other 1 509 -521 5 1267 246 146 24 0 chrX 89425765 89425806 -77224490 + RMER1A Other Other 5 46 -984 5 1267 319 308 15 84 chrX 89426402 89426533 -77223763 - HAL1-3A_ME LINE L1 -453 2405 2284 5 1267 926 276 76 13 chrX 89426883 89427199 -77223097 + L1_Mur3 LINE L1 5533 5868 -12 5 1267 1672 47 0 9 chrX 89427236 89427509 -77222787 - L1Md_F3 LINE L1 0 6584 6357 5 1267 255 214 0 28 chrX 89427509 89427522 -77222774 + T-rich Low_complexity Low_complexity 1 13 0 5 1267 1577 218 66 28 chrX 89427743 89428106 -77222190 + Lx5 LINE L1 6674 7050 0 5 1267 7683 96 19 0 chrX 89429897 89431349 -77218947 - L1_Mus3 LINE L1 -7 6631 5152 5 1267 539 117 11 0 chrX 89431400 89431494 -77218802 + (TG)n Simple_repeat Simple_repeat 2 96 0 5 1267 1140 280 76 0 chrX 89431550 89431825 -77218471 + ORR1D2 LTR MaLR 1 296 -74 5 1267 376 242 119 13 chrX 89431834 89431985 -77218311 - L1MA6 LINE L1 -404 5896 5730 5 1267 304 233 31 55 chrX 89431989 89432116 -77218180 - L1M3 LINE L1 -581 5608 5485 5 1267 308 294 147 0 chrX 89432108 89432285 -77218011 - L1M3 LINE L1 -1266 4874 4672 5 1267 21 57 0 0 chrX 89432375 89432410 -77217886 + AT_rich Low_complexity Low_complexity 1 35 0 5 1267 418 265 34 0 chrX 89432914 89433031 -77217265 - MTE-int LTR MaLR -2 1578 1458 5 1267 510 273 236 0 chrX 89433175 89433336 -77216960 - MTE-int LTR MaLR -329 1251 1053 5 1267 1457 254 40 60 chrX 89433329 89433778 -77216518 + RMER13A LTR ERVK 421 860 0 5 1267 181 133 39 26 chrX 89433803 89433880 -77216416 + A-rich Low_complexity Low_complexity 3 80 0 5 1267 28 0 0 0 chrX 89434178 89434206 -77216090 + AT_rich Low_complexity Low_complexity 1 28 0 5 1267 225 0 0 0 chrX 89434256 89434281 -77216015 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 5 1267 327 121 0 0 chrX 89434284 89434342 -77215954 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 1267 782 269 0 0 chrX 89434350 89434510 -77215786 - B3A SINE B2 -38 160 1 5 1267 468 0 0 0 chrX 89435374 89435426 -77214870 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1267 224 324 21 14 chrX 89435938 89436082 -77214214 + CT-rich Low_complexity Low_complexity 2 146 0 6 1267 31 44 0 0 chrX 89436547 89436592 -77213704 + AT_rich Low_complexity Low_complexity 1 45 0 6 1267 26 82 0 0 chrX 89438769 89438830 -77211466 + AT_rich Low_complexity Low_complexity 1 61 0 6 1267 1022 188 86 5 chrX 89439218 89439427 -77210869 - URR1A DNA MER1_type 0 226 1 6 1267 182 37 37 0 chrX 89439967 89439994 -77210302 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 6 1267 2100 238 57 24 chrX 89440649 89441157 -77209139 - Lx6 LINE L1 0 7460 6936 6 1267 750 23 0 0 chrX 89441176 89441264 -77209032 + (TC)n Simple_repeat Simple_repeat 1 88 0 6 1267 336 64 0 0 chrX 89441264 89441310 -77208986 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1267 291 237 0 38 chrX 89441313 89441392 -77208904 + CT-rich Low_complexity Low_complexity 2 77 0 6 1267 403 223 20 41 chrX 89441393 89441491 -77208805 - Lx6 LINE L1 -566 6894 6799 6 1267 448 171 17 67 chrX 89441532 89441651 -77208645 + Lx3A LINE L1 6869 6981 0 6 1267 744 255 18 12 chrX 89443164 89443331 -77206965 - B3 SINE B2 -2 214 47 6 1267 2248 63 0 0 chrX 89443331 89443616 -77206680 + L1_Mus1 LINE L1 6282 6566 -1 6 1267 203 175 0 0 chrX 89443629 89443669 -77206627 + A-rich Low_complexity Low_complexity 1 40 0 6 1267 989 32 0 8 chrX 89444206 89444331 -77205965 - B1_Mus1 SINE Alu 0 148 25 6 1267 813 134 13 13 chrX 89444382 89444541 -77205755 + L1_Mus3 LINE L1 6478 6636 -2 6 1267 16917 68 1 39 chrX 89444736 89447978 -77202318 + L1Md_F2 LINE L1 3412 6516 -66 6 1267 24 0 0 0 chrX 89448104 89448128 -77202168 + AT_rich Low_complexity Low_complexity 1 24 0 6 1267 26 74 0 0 chrX 89448703 89448757 -77201539 + AT_rich Low_complexity Low_complexity 1 54 0 6 1267 21 36 0 0 chrX 89448899 89448927 -77201369 + AT_rich Low_complexity Low_complexity 1 28 0 6 1267 469 290 67 22 chrX 89449714 89449894 -77200402 - MER67C LTR ERV1 0 711 524 6 1267 561 88 0 0 chrX 89449895 89449975 -77200321 + (TA)n Simple_repeat Simple_repeat 2 81 0 6 1267 365 297 42 0 chrX 89449977 89450095 -77200201 - MER67C LTR ERV1 -222 489 367 6 1267 464 270 160 17 chrX 89450146 89450383 -77199913 - MER67C LTR ERV1 -440 271 1 6 1267 1095 119 0 75 chrX 89450540 89450580 -77199716 - L1_Mm LINE L1 -274 5609 5573 6 1267 3853 113 81 0 chrX 89450580 89451163 -77199133 - Lx LINE L1 -1 6653 6024 6 1267 1095 119 0 75 chrX 89451163 89451322 -77198974 - L1_Mm LINE L1 -311 5572 5425 6 1267 288 334 100 11 chrX 89451337 89451697 -77198599 + L1MC3 LINE L1 7308 7699 -86 6 1267 1412 44 0 6 chrX 89452032 89452213 -77198083 + (TC)n Simple_repeat Simple_repeat 1 180 0 6 1267 495 60 0 0 chrX 89452213 89452280 -77198016 + (TA)n Simple_repeat Simple_repeat 2 68 0 6 1267 318 317 0 12 chrX 89452377 89452460 -77197836 + ID4_ SINE ID 1 82 -1 6 1267 227 244 0 0 chrX 89452519 89452564 -77197732 + B1F1 SINE Alu 92 136 -13 6 1267 29704 69 3 3 chrX 89454813 89459707 -77190589 - L1Md_F2 LINE L1 -3 6579 1686 6 1267 35652 45 1 3 chrX 89459708 89465742 -77184554 - L1Md_T LINE L1 0 6585 467 6 1267 548 160 238 25 chrX 89465754 89465876 -77184420 - B1_Mus1 SINE Alu 0 148 1 6 1267 22694 124 108 24 chrX 89466306 89469174 -77181122 + L1_Mus2 LINE L1 675 3475 -2408 6 1267 194 0 70 47 chrX 89469174 89469217 -77181079 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 6 1267 22694 106 89 4 chrX 89469217 89471761 -77178535 + L1_Mus2 LINE L1 3476 6564 -2 6 1267 2913 235 115 77 chrX 89471773 89472787 -77177509 + Lx9 LINE L1 6462 7516 -128 6 1267 297 89 0 0 chrX 89472787 89472832 -77177464 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 1267 2913 235 115 77 chrX 89472832 89472957 -77177339 + Lx9 LINE L1 7517 7644 0 6 1267 526 272 52 0 chrX 89473619 89473792 -77176504 - Lx8 LINE L1 -96 7377 7196 6 1267 4036 139 13 5 chrX 89473836 89474458 -77175838 - Lx2 LINE L1 -1 6996 6370 6 1267 1288 77 20 0 chrX 89474490 89474686 -77175610 + L1_Mus2 LINE L1 6366 6565 -1 6 1267 1279 142 9 0 chrX 89474713 89474924 -77175372 - Lx2 LINE L1 -655 6342 6130 6 1267 7039 87 1 13 chrX 89474933 89475447 -77174849 - Lx2 LINE L1 -121 5762 5257 6 1267 2910 18 0 3 chrX 89475447 89475784 -77174512 - L1Md_A LINE L1 0 6582 6247 6 1267 7039 87 1 13 chrX 89475784 89476302 -77173994 - Lx2 LINE L1 -627 5256 4742 6 1267 6102 79 2 1 chrX 89476302 89477112 -77173184 + L1_Mus2 LINE L1 5756 6566 0 6 1267 468 374 27 23 chrX 89478288 89478548 -77171748 + LTR16C LTR ERVL 201 461 -28 6 1267 432 352 16 33 chrX 89478750 89478932 -77171364 + LTR16B1 LTR ERVL 1 179 -301 6 1267 720 302 54 65 chrX 89478931 89479282 -77171014 - MLT2C1 LTR ERVL -48 349 3 6 1267 1908 27 0 0 chrX 89481056 89481279 -77169017 + L1Md_F2 LINE L1 6358 6580 -2 6 1267 290 331 36 48 chrX 89481575 89481743 -77168553 - MER3 DNA MER1_type -43 166 1 6 1267 26 50 0 0 chrX 89481918 89481958 -77168338 + AT_rich Low_complexity Low_complexity 1 40 0 6 1267 2204 91 25 21 chrX 89482012 89482338 -77167958 - IAPLTR2b LTR ERVK 0 327 1 6 1267 5840 39 4 13 chrX 89482340 89483091 -77167205 - IAPEz-int LTR ERVK -2 6479 5736 6 1267 2092 72 0 0 chrX 89483090 89483368 -77166928 - IAPEz-int LTR ERVK -4845 1636 1359 6 1267 3359 51 19 16 chrX 89483368 89484016 -77166280 - IAPEz-int LTR ERVK -5819 662 116 6 1267 238 309 0 0 chrX 89484016 89484071 -77166225 - RLTR27 LTR ERVK -34 275 221 6 1267 897 128 25 86 chrX 89484071 89484268 -77166028 - IAPEz-int LTR ERVK -6288 193 9 6 1267 2141 100 25 21 chrX 89484269 89484595 -77165701 - IAPLTR2b LTR ERVK 0 327 1 6 1267 520 115 72 10 chrX 89484646 89484743 -77165553 - Lx LINE L1 -7 6647 6545 6 1267 707 36 0 101 chrX 89485847 89485938 -77164358 - L1Md_F2 LINE L1 -1599 5874 5786 6 1267 377 48 16 31 chrX 89485938 89486002 -77164294 - L1Md_F2 LINE L1 -12 6570 6508 6 1267 707 11 0 112 chrX 89486002 89486026 -77164270 - L1Md_F2 LINE L1 -791 5791 5774 6 1267 4196 84 128 29 chrX 89486026 89486673 -77163623 + L1Md_F2 LINE L1 5866 6576 -6 6 1267 3395 137 25 9 chrX 89486676 89487680 -77162616 + L1Md_A LINE L1 220 1398 -4488 6 1267 33188 61 11 8 chrX 89487681 89493714 -77156582 + L1Md_F2 LINE L1 246 6302 -280 6 1267 2241 139 64 55 chrX 89493714 89494185 -77156111 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1267 4186 59 66 22 chrX 89494187 89494826 -77155470 + IAPEz-int LTR ERVK 3 662 -5819 6 1267 44309 10 1 0 chrX 89494826 89499943 -77150353 + IAPEz-int LTR ERVK 1359 6481 0 6 1267 425 53 0 0 chrX 89499943 89500000 -77150296 + IAPLTR2_Mm LTR ERVK 1 57 -270 6 1267 1782 147 74 64 chrX 89500000 89500407 -77149889 + IAPLTR2_Mm LTR ERVK 58 468 -7 1 1267 1843 115 3 14 chrX 89500411 89500701 -77149595 + L1Md_F2 LINE L1 6294 6580 -2 2 1267 264 220 67 17 chrX 89501631 89501691 -77148605 + ID4 SINE ID 15 77 -6 3 1267 476 247 226 31 chrX 89501644 89501803 -77148493 + ID_B1 SINE B4 32 221 -3 4 1267 414 39 0 0 chrX 89501845 89501897 -77148399 + (A)n Simple_repeat Simple_repeat 1 52 0 5 1267 2275 175 7 12 chrX 89502443 89502848 -77147448 + Lx2B LINE L1 6576 6978 -22 6 1267 316 336 8 14 chrX 89502882 89503086 -77147210 + L1M1 LINE L1 5386 5588 -712 7 1267 689 285 67 39 chrX 89503087 89503580 -77146716 + Lx7 LINE L1 5600 6106 -1590 8 1267 21 0 0 0 chrX 89503615 89503636 -77146660 + AT_rich Low_complexity Low_complexity 1 21 0 9 1267 252 0 0 0 chrX 89503941 89503969 -77146327 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1 1267 335 252 108 78 chrX 89505605 89505734 -77144562 + RMER1B Other Other 409 541 -525 1 1267 296 216 9 25 chrX 89505737 89505843 -77144453 + RMER1B Other Other 926 1066 0 1 1267 273 75 37 19 chrX 89505866 89505920 -77144376 + (GGGA)n Simple_repeat Simple_repeat 3 57 0 1 1267 256 297 97 19 chrX 89505931 89506034 -77144262 - Tigger2b DNA MER2_type -246 480 370 1 1267 363 231 25 17 chrX 89506501 89506620 -77143676 - Tigger2b DNA MER2_type -375 351 232 1 1267 363 152 0 0 chrX 89506610 89506669 -77143627 + RMER1A Other Other 541 599 -431 1 1267 387 0 0 0 chrX 89506683 89506726 -77143570 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1267 438 239 0 37 chrX 89506830 89506951 -77143345 - B1F SINE Alu -7 110 2 1 1267 464 355 58 0 chrX 89507192 89507363 -77142933 - MLT1F LTR MaLR -174 374 194 1 1267 550 312 154 51 chrX 89507363 89507574 -77142722 + MLT2B4 LTR ERVL 1 220 -336 1 1267 6856 81 47 7 chrX 89507574 89507616 -77142680 + Lx3_Mus LINE L1 5993 6034 -975 1 1267 222 37 0 0 chrX 89507616 89507643 -77142653 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 2 1267 6856 81 47 7 chrX 89507643 89508573 -77141723 + Lx3_Mus LINE L1 6035 7003 -6 1 1267 550 312 154 51 chrX 89508573 89508796 -77141500 + MLT2B4 LTR ERVL 221 480 -76 1 1267 1048 49 28 14 chrX 89509341 89509486 -77140810 - B1_Mm SINE Alu 0 147 1 2 1267 2111 50 28 14 chrX 89509687 89509973 -77140323 - L1Md_F3 LINE L1 0 6584 6295 2 1267 3102 36 3 8 chrX 89510456 89510847 -77139449 + MTA_Mm LTR MaLR 1 389 -7 2 1267 193 151 19 19 chrX 89510849 89510903 -77139393 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 1267 21 57 0 0 chrX 89510907 89510942 -77139354 + AT_rich Low_complexity Low_complexity 1 35 0 2 1267 1894 103 0 0 chrX 89511067 89511328 -77138968 + Lx2 LINE L1 6385 6645 -352 2 1267 1315 147 31 0 chrX 89511317 89511542 -77138754 + Lx2 LINE L1 6765 6996 -1 2 1267 789 365 32 29 chrX 89511609 89511888 -77138408 - B4A SINE B4 0 292 13 2 1267 786 205 26 0 chrX 89511924 89512080 -77138216 - B3 SINE B2 0 216 57 2 1267 926 247 27 0 chrX 89512273 89512459 -77137837 + B3 SINE B2 1 191 -25 2 1267 4237 29 0 0 chrX 89512635 89513126 -77137170 - L1Md_A LINE L1 -1 6581 6091 3 1267 1933 36 0 0 chrX 89513126 89513350 -77136946 + L1_Mm LINE L1 5390 5613 -270 3 1267 455 280 75 50 chrX 89513465 89513787 -77136509 - L1M3 LINE L1 -3202 2938 2613 3 1267 41129 5 0 0 chrX 89513938 89520514 -77129782 - L1Md_A LINE L1 0 6582 7 3 1267 726 67 151 0 chrX 89520539 89520658 -77129638 - L1_Mus2 LINE L1 0 6566 6430 3 1267 4704 94 0 0 chrX 89520658 89521325 -77128971 + L1_Mm LINE L1 4190 4856 -1027 3 1267 180 0 0 0 chrX 89521555 89521575 -77128721 + (TTGG)n Simple_repeat Simple_repeat 4 23 0 3 1267 1110 180 18 5 chrX 89521598 89521816 -77128480 + URR1B DNA MER1_type 5 225 0 3 1267 30 45 0 0 chrX 89521905 89521949 -77128347 + AT_rich Low_complexity Low_complexity 1 44 0 3 158 745 201 7 7 chrX 89522042 89522182 -77128114 + B1_Mur4 SINE Alu 11 150 0 3 1268 21 36 0 0 chrX 89522183 89522211 -77128085 + AT_rich Low_complexity Low_complexity 1 28 0 4 1268 546 153 9 35 chrX 89522221 89522336 -77127960 - RMER16 LTR ERVK -83 450 339 4 1268 2218 161 11 0 chrX 89522338 89522711 -77127585 + Lx5 LINE L1 5494 5870 -7 4 1268 3121 138 4 4 chrX 89522727 89523214 -77127082 - RLTR1C LTR ERV1 -16 487 1 4 1268 3699 211 27 12 chrX 89523214 89523980 -77126316 + Lx5 LINE L1 5873 6650 -400 4 1268 203 103 26 0 chrX 89524224 89524263 -77126033 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1268 455 340 7 0 chrX 89524278 89524431 -77125865 - Lx7 LINE L1 -1950 5746 5593 4 1268 726 283 111 43 chrX 89524428 89524640 -77125656 + L1_Rod LINE L1 5096 5389 -911 4 1268 746 152 0 0 chrX 89524640 89524772 -77125524 + Lx2 LINE L1 6866 6997 0 4 1268 726 298 53 32 chrX 89524772 89525012 -77125284 + L1_Rod LINE L1 5390 5641 -659 4 1268 391 276 102 8 chrX 89526292 89526420 -77123876 + MER5A DNA MER1_type 2 141 -48 4 1268 277 288 174 53 chrX 89526466 89526598 -77123698 - B1F2 SINE Alu 0 149 2 4 1268 267 373 96 19 chrX 89526598 89526628 -77123668 - ID_B1 SINE B4 -130 94 53 5 1268 25 0 0 0 chrX 89526745 89526770 -77123526 + AT_rich Low_complexity Low_complexity 1 25 0 5 1268 8419 100 2 1 chrX 89527368 89528547 -77121749 + L1_Mm LINE L1 4669 5848 -35 5 1268 536 158 10 10 chrX 89528547 89528643 -77121653 + MTD LTR MaLR 324 419 0 5 1268 286 252 16 83 chrX 89528677 89528798 -77121498 - Lx4B LINE L1 -5 7053 6941 5 1268 676 216 201 21 chrX 89528818 89528860 -77121436 - Lx5 LINE L1 -51 7007 6968 5 1268 612 81 0 0 chrX 89528860 89528947 -77121349 + (CA)n Simple_repeat Simple_repeat 1 87 0 5 1268 758 169 142 2 chrX 89528947 89529098 -77121198 - Lx5 LINE L1 -91 6967 6755 5 1268 256 374 14 0 chrX 89530304 89530443 -77119853 - L1M3e LINE L1 -6845 185 45 5 1268 3234 39 15 0 chrX 89530448 89530838 -77119458 - MTA_Mm LTR MaLR 0 396 1 5 1268 1771 277 19 5 chrX 89531059 89531476 -77118820 - Lx6 LINE L1 -26 7434 7012 5 1268 362 303 122 47 chrX 89531490 89531743 -77118553 - BLACKJACK DNA AcHobo -496 2448 2177 6 1268 238 258 78 8 chrX 89531841 89531970 -77118326 + L1M5 LINE L1 5341 5478 -701 6 1268 263 384 95 7 chrX 89532022 89532169 -77118127 + B4A SINE B4 123 282 -10 6 1268 243 0 0 0 chrX 89532202 89532229 -77118067 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1268 315 47 0 0 chrX 89532446 89532472 -77117824 + (TA)n Simple_repeat Simple_repeat 1 26 0 6 1268 468 51 0 0 chrX 89532472 89532531 -77117765 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1268 315 47 0 0 chrX 89532531 89532547 -77117749 + (TA)n Simple_repeat Simple_repeat 1 16 0 6 1268 492 18 0 0 chrX 89532666 89532723 -77117573 + (TTTC)n Simple_repeat Simple_repeat 4 60 0 6 1268 484 261 0 0 chrX 89532723 89532811 -77117485 - B1_Mur2 SINE Alu -13 136 49 6 1268 2495 73 5 58 chrX 89532839 89533216 -77117080 + L1_Mus3 LINE L1 6278 6634 -4 6 1268 324 341 179 0 chrX 89534803 89535049 -77115247 - L1ME3A LINE L1 -5 6168 5879 7 1268 29 28 0 0 chrX 89535602 89535638 -77114658 + AT_rich Low_complexity Low_complexity 1 36 0 7 1268 24 77 0 0 chrX 89535647 89535699 -77114597 + AT_rich Low_complexity Low_complexity 1 52 0 7 1268 22 0 0 0 chrX 89535791 89535813 -77114483 + AT_rich Low_complexity Low_complexity 1 22 0 7 1268 411 298 32 0 chrX 89535935 89536029 -77114267 - RSINE1 SINE B4 -29 136 40 7 1268 1161 34 0 0 chrX 89537485 89537631 -77112665 - L1Md_A LINE L1 -1 6581 6436 7 1268 1049 168 11 0 chrX 89537835 89538026 -77112270 + Lx4A LINE L1 6866 7058 0 7 1268 387 0 0 0 chrX 89538184 89538227 -77112069 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 1268 625 182 8 0 chrX 89538227 89538353 -77111943 - Lx4A LINE L1 -8 7050 6924 7 1268 191 232 132 12 chrX 89538414 89538497 -77111799 + L2a LINE L2 3328 3420 -6 7 1268 1179 77 48 0 chrX 89538918 89539086 -77111210 + L1_Mus1 LINE L1 6389 6564 -3 8 1268 1150 222 60 25 chrX 89540050 89540332 -77109964 + Lx7 LINE L1 6818 7109 -587 8 1268 21698 88 1 7 chrX 89540772 89544738 -77105558 + L1Md_F LINE L1 366 4307 -1576 8 1268 8641 16 1 0 chrX 89544743 89546264 -77104032 - L1Md_A LINE L1 0 6582 5061 8 1268 27748 36 4 1 chrX 89546259 89549653 -77100643 + L1Md_F2 LINE L1 2180 5586 -297 8 1268 7131 73 32 5 chrX 89549654 89550623 -77099673 + L1Md_F2 LINE L1 5588 6582 0 8 1268 689 263 145 30 chrX 89550856 89551318 -77098978 + L1M3 LINE L1 4276 4790 -1350 8 1268 2786 80 5 8 chrX 89551449 89551841 -77098455 - L1_Mus3 LINE L1 0 6638 6248 8 1268 197 33 33 0 chrX 89551917 89551947 -77098349 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 1268 346 233 41 24 chrX 89552015 89552138 -77098158 + L1M3 LINE L1 5169 5293 -847 8 1268 245 316 25 126 chrX 89552187 89552346 -77097950 + B3A SINE B2 22 164 -34 8 1268 510 17 0 0 chrX 89552351 89552410 -77097886 + (CA)n Simple_repeat Simple_repeat 2 60 0 8 1268 269 109 0 21 chrX 89552461 89552508 -77097788 + (TCTCCC)n Simple_repeat Simple_repeat 3 48 0 9 1268 649 259 132 32 chrX 89552540 89552791 -77097505 - B4A SINE B4 -16 276 1 9 1268 726 269 77 15 chrX 89552848 89553189 -77097107 + L1M3 LINE L1 5421 5791 -392 8 1268 23 33 0 0 chrX 89553357 89553387 -77096909 + AT_rich Low_complexity Low_complexity 1 30 0 9 1268 2114 175 62 3 chrX 89554043 89554432 -77095864 + MTC LTR MaLR 2 413 -8 9 1268 180 361 134 64 chrX 89554953 89555110 -77095186 - MER5B DNA MER1_type 0 178 11 9 1268 1486 100 14 0 chrX 89557466 89557686 -77092610 + L1_Mus2 LINE L1 6342 6564 -2 9 1268 24 53 0 0 chrX 89558052 89558090 -77092206 + AT_rich Low_complexity Low_complexity 1 38 0 9 1268 402 269 78 19 chrX 89558091 89558335 -77091961 - Lx5 LINE L1 -5 7045 6722 9 1268 7686 149 15 6 chrX 89558559 89559808 -77090488 + Lx4A LINE L1 5767 7026 -32 9 1268 3888 108 26 2 chrX 89560916 89561498 -77088798 + Lx LINE L1 6056 6651 -3 9 1268 4434 31 0 4 chrX 89561617 89562138 -77088158 + L1Md_F2 LINE L1 6050 6568 -14 1 1268 967 73 0 0 chrX 89562146 89562282 -77088014 + L1_Mm LINE L1 5227 5362 -521 1 1268 3513 92 34 2 chrX 89563337 89563848 -77086448 + L1_Mus2 LINE L1 5656 6153 -413 1 1268 1383 93 10 0 chrX 89563848 89564042 -77086254 + L1_Mus2 LINE L1 6370 6565 -2 1 1268 452 102 60 20 chrX 89564138 89564238 -77086058 + A-rich Low_complexity Low_complexity 2 105 0 1 1268 6525 64 9 24 chrX 89564301 89565179 -77085117 + L1_Mus2 LINE L1 5701 6565 -1 1 1268 188 35 35 0 chrX 89565255 89565284 -77085012 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1268 28 29 0 0 chrX 89565355 89565390 -77084906 + AT_rich Low_complexity Low_complexity 1 35 0 1 1268 405 0 0 0 chrX 89565492 89565537 -77084759 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1268 397 342 28 20 chrX 89565747 89565995 -77084301 + L1MA6 LINE L1 5876 6125 -175 1 1268 843 249 93 0 chrX 89566037 89566230 -77084066 + B3 SINE B2 1 211 -5 1 1268 382 298 53 44 chrX 89566287 89566512 -77083784 - L1ME2 LINE L1 -176 5988 5762 1 1268 611 272 0 64 chrX 89566860 89567033 -77083263 - RSINE1 SINE B4 -2 163 2 1 1268 2345 115 6 3 chrX 89567216 89567566 -77082730 - Lx LINE L1 -5 6649 6299 1 1268 526 289 33 0 chrX 89568114 89568235 -77082061 + RSINE1 SINE B4 29 153 -12 1 1268 219 233 329 0 chrX 89568369 89568442 -77081854 + RSINE1 SINE B4 3 99 -66 1 1268 21 36 0 0 chrX 89568485 89568513 -77081783 + AT_rich Low_complexity Low_complexity 1 28 0 1 1268 441 81 0 0 chrX 89569644 89569706 -77080590 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 1 1268 233 254 29 43 chrX 89569771 89569841 -77080455 + PB1D9 SINE Alu 1 69 -51 1 1268 610 219 0 26 chrX 89569814 89569931 -77080365 - B3A SINE B2 -84 114 1 1 1268 14827 23 1 0 chrX 89569974 89571736 -77078560 - L1_Mm LINE L1 -1335 4548 2786 1 1268 287 398 9 0 chrX 89572882 89572990 -77077306 - MER81 DNA AcHobo -5 109 1 1 1268 304 211 211 0 chrX 89573903 89573993 -77076303 - B4A SINE B4 -74 218 110 1 1268 892 313 135 19 chrX 89574460 89574935 -77075361 + Lx8 LINE L1 6935 7464 -9 1 1268 358 267 125 65 chrX 89575738 89576123 -77074173 + L1MA6 LINE L1 3059 3466 -2677 1 1268 904 293 120 29 chrX 89576144 89576985 -77073311 + L1MA6 LINE L1 4965 5894 -406 1 1268 471 248 66 0 chrX 89576995 89577116 -77073180 - B1_Mur1 SINE Alu -19 130 2 1 1268 635 216 0 0 chrX 89577193 89577309 -77072987 + B1_Mur2 SINE Alu 3 118 -31 1 1268 852 10 0 0 chrX 89577309 89577406 -77072890 + (GA)n Simple_repeat Simple_repeat 2 98 0 1 1268 343 226 0 31 chrX 89577409 89577505 -77072791 + L1MA6 LINE L1 6202 6294 -6 1 1268 23 0 0 0 chrX 89577505 89577528 -77072768 + AT_rich Low_complexity Low_complexity 1 23 0 1 1268 985 53 23 0 chrX 89577650 89577783 -77072513 + B1_Mus1 SINE Alu 13 148 0 1 1268 1620 26 0 0 chrX 89577785 89578053 -77072243 + (GGAGAA)n Simple_repeat Simple_repeat 1 268 0 1 1268 648 0 0 0 chrX 89578053 89578125 -77072171 + (GAA)n Simple_repeat Simple_repeat 1 72 0 1 1268 261 83 0 0 chrX 89579282 89579318 -77070978 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1268 588 300 58 48 chrX 89581461 89581650 -77068646 + B3A SINE B2 8 198 0 1 1268 256 333 149 0 chrX 89581877 89582045 -77068251 + L3 LINE CR1 2805 2997 -1492 1 1268 716 0 0 12 chrX 89582075 89582160 -77068136 + (TAGA)n Simple_repeat Simple_repeat 2 85 0 1 1268 256 295 13 13 chrX 89582955 89583034 -77067262 - ID4_ SINE ID -3 80 2 1 1268 231 88 0 0 chrX 89583045 89583079 -77067217 + (TTTTG)n Simple_repeat Simple_repeat 5 38 0 1 1268 333 0 0 0 chrX 89583089 89583126 -77067170 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1268 441 277 51 58 chrX 89583126 89583264 -77067032 - RSINE1 SINE B4 -14 151 15 1 1268 250 336 103 15 chrX 89583954 89584090 -77066206 + B1F SINE Alu 1 148 -1 1 1268 270 0 0 0 chrX 89586576 89586606 -77063690 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 1268 371 144 114 46 chrX 89588020 89588151 -77062145 + Lx9 LINE L1 7505 7644 0 1 1268 25 0 0 0 chrX 89588160 89588185 -77062111 + AT_rich Low_complexity Low_complexity 1 25 0 1 1268 533 312 44 6 chrX 89588339 89588497 -77061799 + B3A SINE B2 1 164 -34 1 1268 287 325 43 26 chrX 89588573 89588807 -77061489 + L1MEf LINE L1 885 1122 -5078 1 1268 244 158 53 0 chrX 89588997 89589054 -77061242 + T-rich Low_complexity Low_complexity 1 60 0 1 1268 423 0 0 0 chrX 89589172 89589219 -77061077 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1268 347 0 23 0 chrX 89589239 89589282 -77061014 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1 1268 279 247 31 92 chrX 89589398 89589496 -77060800 + ID_B1 SINE B4 132 223 -1 1 1268 615 249 36 0 chrX 89589832 89589995 -77060301 - B3 SINE B2 -5 193 14 1 1268 198 0 0 0 chrX 89590137 89590159 -77060137 + (TTG)n Simple_repeat Simple_repeat 1 22 0 1 1268 21 0 0 0 chrX 89590928 89590949 -77059347 + AT_rich Low_complexity Low_complexity 1 21 0 1 1268 261 22 43 21 chrX 89591430 89591477 -77058819 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 1 1268 311 185 15 15 chrX 89592157 89592223 -77058073 + B1_Mur3 SINE Alu 77 142 -7 1 1268 266 215 0 12 chrX 89592315 89592395 -77057901 + GA-rich Low_complexity Low_complexity 1 79 0 1 1268 420 37 0 0 chrX 89592410 89592464 -77057832 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1268 725 208 185 0 chrX 89592469 89592642 -77057654 + B3 SINE B2 2 206 -10 1 1268 347 322 88 34 chrX 89593063 89593301 -77056995 + L1MC4 LINE L1 6916 7166 -876 1 1268 381 159 16 0 chrX 89593353 89593416 -77056880 + B1_Mur2 SINE Alu 80 143 -6 1 1268 259 98 0 56 chrX 89594264 89594318 -77055978 - Lx4B LINE L1 -4 7054 7004 1 1268 369 300 14 6 chrX 89594428 89594513 -77055783 + B3A SINE B2 1 86 -107 1 1268 2378 200 80 31 chrX 89594513 89595087 -77055209 + RLTR1D LTR ERV1 4 605 0 1 1268 210 357 29 67 chrX 89595087 89595106 -77055190 + B2_Mm1t SINE B2 87 101 -92 1 1268 229 155 33 33 chrX 89595132 89595192 -77055104 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 1 1268 540 337 66 16 chrX 89596193 89596558 -77053738 - L1ME3A LINE L1 -57 6116 5734 1 1268 335 21 43 0 chrX 89596807 89596854 -77053442 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1 1268 995 88 0 0 chrX 89596856 89596992 -77053304 - B1_Mus1 SINE Alu -12 136 1 1 1268 1763 202 47 22 chrX 89597256 89597665 -77052631 + MTD LTR MaLR 1 419 0 1 1268 1245 98 0 0 chrX 89597775 89598143 -77052153 + (GAA)n Simple_repeat Simple_repeat 1 368 0 1 1268 2020 265 21 40 chrX 89598430 89598961 -77051335 - Lx6 LINE L1 -11 7449 6929 1 1268 429 208 68 19 chrX 89600315 89600418 -77049878 + B3A SINE B2 2 109 -89 1 1268 2931 134 3 17 chrX 89601079 89601551 -77048745 + Lx2 LINE L1 5288 5753 -133 1 1268 3305 21 118 0 chrX 89601551 89601976 -77048320 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1268 2931 177 23 88 chrX 89601976 89602114 -77048182 + Lx2 LINE L1 5750 5801 -85 1 1268 195 42 0 0 chrX 89602114 89602138 -77048158 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1268 6950 152 28 5 chrX 89602138 89603322 -77046974 + Lx2 LINE L1 5788 6997 0 1 1268 655 250 20 45 chrX 89603414 89603615 -77046681 - B3A SINE B2 -1 197 2 1 1268 399 68 0 0 chrX 89603646 89603705 -77046591 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1 1268 3389 118 4 8 chrX 89603707 89604230 -77046066 - Lx3A LINE L1 -6 6975 6455 1 1268 4638 143 7 0 chrX 89604276 89605016 -77045280 + Lx2 LINE L1 6253 6997 0 1 1268 23 33 0 0 chrX 89605527 89605557 -77044739 + AT_rich Low_complexity Low_complexity 1 30 0 1 1268 346 336 78 0 chrX 89605655 89605783 -77044513 - B3 SINE B2 -9 207 70 1 1268 637 283 93 34 chrX 89605840 89606228 -77044068 - L1_Rod LINE L1 -624 5223 4813 1 1268 1431 153 0 5 chrX 89606237 89606453 -77043843 - MTC LTR MaLR -8 413 199 1 1268 27 29 0 0 chrX 89606453 89606487 -77043809 + AT_rich Low_complexity Low_complexity 1 34 0 1 1268 928 244 5 0 chrX 89606616 89606809 -77043487 - MTC LTR MaLR -227 194 1 1 1268 794 146 89 0 chrX 89606810 89606968 -77043328 - MTC-int LTR MaLR -9 1249 1078 1 1268 686 132 54 0 chrX 89606973 89607102 -77043194 + Lx2 LINE L1 6858 6993 -4 1 1268 7163 125 65 15 chrX 89607123 89608304 -77041992 + Lx4A LINE L1 5812 7051 -7 1 1268 222 37 0 0 chrX 89608306 89608333 -77041963 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 1268 571 199 63 19 chrX 89608341 89608500 -77041796 - MTC-int LTR MaLR -156 1102 937 1 1268 908 153 70 12 chrX 89608490 89608662 -77041634 - MTC-int LTR MaLR -607 651 470 1 1268 289 0 0 47 chrX 89609356 89609399 -77040897 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 1268 514 348 25 13 chrX 89609529 89609686 -77040610 + RSINE1 SINE B4 3 161 -4 1 1268 1052 225 5 46 chrX 89609901 89610120 -77040176 + B3 SINE B2 7 216 0 1 1268 921 221 39 10 chrX 89610502 89610708 -77039588 + B3 SINE B2 5 216 0 1 1268 284 281 34 0 chrX 89611735 89611824 -77038472 + Lx8 LINE L1 7036 7127 -346 1 1268 271 290 126 29 chrX 89611918 89612021 -77038275 - PB1D10 SINE Alu -14 113 1 1 1268 2322 110 3 35 chrX 89612415 89612784 -77037512 + Lx LINE L1 6294 6650 -4 1 1268 2087 32 0 0 chrX 89613109 89613356 -77036940 + L1Md_A LINE L1 6335 6581 -1 1 1268 241 271 43 0 chrX 89613407 89613477 -77036819 - LTR78 LTR ERV1 -926 378 306 1 1268 1949 169 118 24 chrX 89613919 89614301 -77035995 - MTC LTR MaLR 0 421 4 1 1268 5388 206 57 24 chrX 89614314 89615516 -77034780 - MTC-int LTR MaLR -16 1242 1 1 1268 1262 238 83 44 chrX 89615553 89615786 -77034510 - MTC LTR MaLR -70 351 112 1 1268 927 135 220 5 chrX 89615786 89615972 -77034324 - URR1A DNA MER1_type 0 226 1 1 1268 1262 238 83 44 chrX 89615972 89616076 -77034220 - MTC LTR MaLR -310 111 1 1 1268 555 16 0 0 chrX 89616543 89616607 -77033689 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 1268 562 288 163 77 chrX 89616607 89617107 -77033189 - L1MEc LINE L1 -5492 908 361 1 1268 2511 93 47 23 chrX 89617107 89617492 -77032804 - L1Md_F2 LINE L1 0 6582 6189 1 1268 562 288 163 77 chrX 89617492 89617770 -77032526 - L1MEc LINE L1 -6040 360 63 1 1268 407 307 29 10 chrX 89620203 89620305 -77029991 + PB1 SINE Alu 22 125 -2 1 1268 664 240 20 22 chrX 89620735 89620924 -77029372 - B3 SINE B2 -5 190 3 2 1268 4946 45 29 1 chrX 89621579 89622225 -77028071 + ORR1A1-int LTR MaLR 1129 1792 0 2 1268 2359 37 0 3 chrX 89622225 89622521 -77027775 + ORR1A1 LTR MaLR 1 295 -51 2 1268 219 359 86 19 chrX 89623005 89623110 -77027186 - MIR SINE MIR -78 130 19 2 1268 348 82 0 0 chrX 89623371 89623420 -77026876 + Lx3B LINE L1 5750 5798 -1175 2 1268 8759 86 26 2 chrX 89623419 89624644 -77025652 + L1Md_F2 LINE L1 4331 5585 -298 2 1268 7568 63 13 3 chrX 89624646 89625619 -77024677 + L1Md_F2 LINE L1 5588 6570 -12 2 1268 2432 122 37 0 chrX 89625619 89626028 -77024268 + Lx3B LINE L1 5786 6209 -764 2 1268 22 35 0 0 chrX 89626200 89626229 -77024067 + AT_rich Low_complexity Low_complexity 1 29 0 2 1268 321 26 0 0 chrX 89628196 89628234 -77022062 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1268 236 348 9 0 chrX 89628753 89628868 -77021428 + L1MA4 LINE L1 1566 1681 -5168 2 1268 578 314 140 16 chrX 89628878 89629616 -77020680 + L1MA4 LINE L1 1659 2487 -4362 2 1268 575 271 46 21 chrX 89629786 89630156 -77020140 + L1MA4 LINE L1 2769 3148 -3697 2 1268 315 0 0 0 chrX 89630262 89630297 -77019999 + (TA)n Simple_repeat Simple_repeat 1 35 0 2 1268 270 0 0 0 chrX 89630297 89630326 -77019970 + (GA)n Simple_repeat Simple_repeat 2 31 0 2 1268 247 286 9 9 chrX 89630514 89630620 -77019676 + GA-rich Low_complexity Low_complexity 1 106 0 2 1268 1673 247 190 25 chrX 89630639 89630839 -77019457 + L1MA4 LINE L1 4800 5035 -1810 2 1268 441 214 214 0 chrX 89630839 89630951 -77019345 + B1_Mus1 SINE Alu 1 136 -12 2 1268 1673 246 160 20 chrX 89630951 89631907 -77018389 + L1MA4 LINE L1 5036 6146 -856 2 1268 257 246 138 11 chrX 89632040 89632149 -77018147 + L1MA4 LINE L1 6122 6242 -763 2 1268 21 36 0 0 chrX 89632240 89632268 -77018028 + AT_rich Low_complexity Low_complexity 1 28 0 2 1268 332 314 105 44 chrX 89632490 89632954 -77017342 + L2a LINE L2 2659 3157 -269 2 1268 1360 245 53 8 chrX 89632954 89633371 -77016925 - RMER19C LTR ERVK 0 902 341 2 1268 1379 127 127 0 chrX 89633382 89633704 -77016592 - MurERV4_19-int LTR ERVK -2612 3168 2806 2 1268 211 72 0 45 chrX 89633704 89633748 -77016548 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 2 1268 1007 143 35 6 chrX 89633788 89633957 -77016339 - MurERV4_19-int LTR ERVK -2976 2804 2631 2 1268 233 353 67 73 chrX 89633957 89634284 -77016012 + LTR33A LTR ERVL 2 369 -162 2 1268 580 68 0 0 chrX 89634284 89634358 -77015938 + MurERV4_19-int LTR ERVK 3090 3163 -2617 2 1268 316 290 62 41 chrX 89634368 89634612 -77015684 + L1MA4 LINE L1 6400 6650 -352 2 1268 402 273 40 47 chrX 89634612 89634762 -77015534 + B1F2 SINE Alu 1 149 0 2 1268 275 319 88 37 chrX 89634762 89634891 -77015405 + L1MA4 LINE L1 6651 6791 -211 2 1268 915 237 10 40 chrX 89634947 89635113 -77015183 + B3 SINE B2 1 163 -53 2 1268 441 0 0 0 chrX 89635113 89635162 -77015134 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1268 915 237 10 40 chrX 89635162 89635197 -77015099 + B3 SINE B2 164 195 -21 2 1268 310 312 8 51 chrX 89635636 89635754 -77014542 + PB1D10 SINE Alu 4 116 -1 2 1268 584 310 25 20 chrX 89636045 89636246 -77014050 + B3 SINE B2 3 204 -12 2 1268 243 0 0 0 chrX 89636550 89636577 -77013719 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1268 210 288 0 48 chrX 89637293 89637355 -77012941 - MER5B DNA MER1_type -14 164 106 2 1268 1224 65 0 0 chrX 89637422 89637575 -77012721 + B2_Mm2 SINE B2 2 154 -41 2 1268 180 77 0 0 chrX 89637576 89637602 -77012694 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 2 1268 238 152 34 0 chrX 89637770 89637829 -77012467 + (TA)n Simple_repeat Simple_repeat 2 62 0 2 1268 394 321 28 0 chrX 89637835 89637941 -77012355 + B1F SINE Alu 41 149 0 2 1268 246 32 0 0 chrX 89638515 89638546 -77011750 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1268 4426 60 2 3 chrX 89638739 89639304 -77010992 + L1Md_F2 LINE L1 5023 5586 -297 2 1268 8147 39 10 6 chrX 89639305 89640296 -77010000 + L1Md_F2 LINE L1 5588 6582 0 2 1268 1057 92 0 0 chrX 89640364 89640505 -77009791 + B1_Mus1 SINE Alu 2 142 -6 2 1268 414 0 0 0 chrX 89640507 89640553 -77009743 + (GA)n Simple_repeat Simple_repeat 2 47 0 2 1268 9254 92 16 10 chrX 89640742 89642232 -77008064 + Lx3_Mus LINE L1 5509 7003 -6 2 1268 211 211 0 0 chrX 89645316 89645354 -77004942 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2 1268 635 222 29 7 chrX 89645557 89645693 -77004603 + RLTR25B LTR ERVK 1 139 -889 2 1268 297 0 0 0 chrX 89645694 89645727 -77004569 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1268 304 149 9 82 chrX 89645735 89645845 -77004451 + (TTATA)n Simple_repeat Simple_repeat 4 105 0 2 1268 203 114 23 0 chrX 89645862 89645906 -77004390 + (TATAA)n Simple_repeat Simple_repeat 5 49 0 2 1268 348 23 0 0 chrX 89645997 89646025 -77004271 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 1268 333 0 0 0 chrX 89646025 89646062 -77004234 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 1268 348 23 0 0 chrX 89646062 89646076 -77004220 + (CA)n Simple_repeat Simple_repeat 2 15 0 2 1268 1764 162 3 19 chrX 89646081 89646390 -77003906 + RLTR25B LTR ERVK 141 444 -584 2 1268 1205 45 7 0 chrX 89646419 89646574 -77003722 + L1Md_A LINE L1 6427 6582 0 2 1268 1445 187 144 12 chrX 89646591 89646780 -77003516 + RLTR25B LTR ERVK 641 865 -163 2 1268 900 59 0 0 chrX 89646780 89646899 -77003397 + (CCA)n Simple_repeat Simple_repeat 3 121 0 2 1268 1445 187 144 12 chrX 89646899 89647050 -77003246 + RLTR25B LTR ERVK 866 1025 -3 2 1268 297 0 0 0 chrX 89647241 89647274 -77003022 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2 1268 1163 55 0 0 chrX 89647274 89647419 -77002877 - B1_Mus2 SINE Alu -1 146 2 2 1268 479 347 0 20 chrX 89647489 89647639 -77002657 - B1F1 SINE Alu 0 149 3 2 1268 456 168 50 16 chrX 89648061 89648182 -77002114 - Lx9 LINE L1 -5 7639 7515 2 1268 375 105 0 0 chrX 89648182 89648239 -77002057 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 1268 1047 231 52 36 chrX 89648239 89648545 -77001751 - Lx9 LINE L1 -168 7476 7166 2 1268 338 307 30 30 chrX 89648839 89649071 -77001225 - L1M5 LINE L1 -2016 4130 3899 2 1268 389 331 7 13 chrX 89649285 89649435 -77000861 + B1F1 SINE Alu 1 149 0 2 1268 715 250 39 19 chrX 89649725 89649933 -77000363 + B3 SINE B2 1 212 -4 2 1268 22 0 0 0 chrX 89651818 89651840 -76998456 + AT_rich Low_complexity Low_complexity 1 22 0 2 1268 1116 82 0 0 chrX 89651868 89652014 -76998282 + B1_Mus1 SINE Alu 1 146 -2 2 1268 243 0 0 0 chrX 89652014 89652041 -76998255 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1268 666 248 78 39 chrX 89652112 89652318 -76997978 - B3 SINE B2 0 216 3 2 1268 198 336 88 44 chrX 89652696 89652855 -76997441 - MIR SINE MIR -5 257 92 2 1269 383 336 46 15 chrX 89653520 89653650 -76996646 - B1F SINE Alu -1 148 15 2 1269 2688 174 29 25 chrX 89654187 89654712 -76995584 + RLTR24 LTR ERV1 1 527 -2 2 1269 22 0 0 0 chrX 89654726 89654748 -76995548 + AT_rich Low_complexity Low_complexity 1 22 0 2 1269 2062 298 107 8 chrX 89655246 89656093 -76994203 + Tigger6a DNA MER2_type 6 936 -147 2 1269 2184 130 78 0 chrX 89656095 89656440 -76993856 + L1Md_F LINE L1 269 640 -5879 2 1269 565 109 32 56 chrX 89656441 89656567 -76993729 + L1Md_F2 LINE L1 6458 6580 -2 2 1269 24 0 0 0 chrX 89657568 89657592 -76992704 + AT_rich Low_complexity Low_complexity 1 24 0 2 1269 513 0 0 0 chrX 89657669 89657726 -76992570 + (TTTTA)n Simple_repeat Simple_repeat 5 61 0 2 1269 667 253 74 16 chrX 89657726 89657915 -76992381 - B3 SINE B2 -16 200 1 2 1269 465 19 0 0 chrX 89658236 89658290 -76992006 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1269 22 0 0 0 chrX 89658294 89658316 -76991980 + AT_rich Low_complexity Low_complexity 1 22 0 2 1269 4178 201 79 28 chrX 89659307 89660835 -76989461 + Lx7 LINE L1 4947 6550 -1146 2 1269 3243 94 29 0 chrX 89660886 89661332 -76988964 + Lx2 LINE L1 6380 6838 -159 2 1269 4434 90 9 23 chrX 89661349 89662006 -76988290 - L1Md_F2 LINE L1 -2 6580 5933 2 1269 3086 138 50 19 chrX 89662078 89662616 -76987680 + Lx4B LINE L1 6504 7058 0 2 1269 554 321 13 6 chrX 89663073 89663230 -76987066 - RSINE1 SINE B4 -2 163 6 2 1269 369 0 0 0 chrX 89663232 89663273 -76987023 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 2 1269 797 293 57 16 chrX 89663342 89663588 -76986708 + ORR1D2 LTR MaLR 102 357 -13 2 1269 714 250 7 0 chrX 89664201 89664341 -76985955 + B1_Mur1 SINE Alu 3 143 -6 2 1269 1352 134 0 18 chrX 89664467 89664687 -76985609 - ORR1A4 LTR MaLR 0 329 114 2 1269 611 213 8 0 chrX 89664792 89664914 -76985382 - ORR1A4 LTR MaLR -206 123 1 2 1269 298 259 223 0 chrX 89665781 89665978 -76984318 - L1MB7 LINE L1 -241 5943 5703 2 1269 960 233 19 0 chrX 89665979 89666185 -76984111 + B3 SINE B2 1 210 -6 2 1269 244 246 16 16 chrX 89666225 89666287 -76984009 + CT-rich Low_complexity Low_complexity 1 62 0 2 1269 317 258 114 24 chrX 89666352 89666475 -76983821 - L1MB7 LINE L1 -527 5651 5518 2 1269 380 82 16 0 chrX 89666549 89666610 -76983686 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 1269 456 311 116 28 chrX 89666616 89666867 -76983429 - B4A SINE B4 -19 273 1 2 1269 817 263 27 5 chrX 89667659 89667846 -76982450 + B3 SINE B2 1 191 -25 2 1269 264 77 0 0 chrX 89667846 89667885 -76982411 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 1269 473 314 98 11 chrX 89668195 89668369 -76981927 - MER5A DNA MER1_type 0 189 1 2 1269 1284 249 34 71 chrX 89669075 89669456 -76980840 + ORR1D2 LTR MaLR 1 367 -3 2 1269 23 68 0 0 chrX 89670483 89670527 -76979769 + AT_rich Low_complexity Low_complexity 1 44 0 2 1269 1947 95 114 3 chrX 89670869 89671176 -76979120 - L1_Mus3 LINE L1 0 6638 6298 2 1269 212 175 0 0 chrX 89671394 89671434 -76978862 + A-rich Low_complexity Low_complexity 1 40 0 2 1269 386 229 16 71 chrX 89671684 89671811 -76978485 - Tigger5 DNA MER2_type -144 2262 2143 2 1269 1165 301 40 19 chrX 89671814 89672139 -76978157 + MTE2b LTR MaLR 1 332 -47 2 1269 1582 145 95 2 chrX 89672139 89672528 -76977768 + Lx3C LINE L1 6504 6973 -8 2 1269 531 0 0 0 chrX 89672682 89672741 -76977555 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 1269 441 0 0 0 chrX 89672935 89672984 -76977312 + (TTTTG)n Simple_repeat Simple_repeat 3 51 0 2 1269 797 160 132 0 chrX 89673200 89673413 -76976883 + Lx9 LINE L1 7403 7643 -1 2 1269 400 312 100 16 chrX 89673911 89674220 -76976076 + HAL1b LINE L1 1009 1343 -666 2 1269 26 0 0 0 chrX 89674333 89674359 -76975937 + AT_rich Low_complexity Low_complexity 1 26 0 2 1269 557 214 1 7 chrX 89674770 89674944 -76975352 - L1MA4A LINE L1 -286 5882 5725 2 1269 183 80 0 0 chrX 89674944 89674969 -76975327 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1269 2639 201 32 9 chrX 89678060 89679076 -76971220 + L1_Mur2 LINE L1 754 1810 -4067 3 1269 237 268 0 0 chrX 89679161 89679217 -76971079 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 1269 1991 60 11 15 chrX 89679443 89679712 -76970584 + L1_Mus1 LINE L1 6300 6567 0 3 1269 935 326 123 3 chrX 89680012 89680320 -76969976 + MTD LTR MaLR 20 364 -55 3 1269 243 88 0 0 chrX 89680327 89680361 -76969935 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1269 941 219 30 5 chrX 89680910 89681112 -76969184 - B3 SINE B2 -8 208 2 3 1269 423 326 29 0 chrX 89681224 89681399 -76968897 + L1M2 LINE L1 4750 4929 -1214 3 1269 201 39 0 0 chrX 89681627 89681653 -76968643 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 1269 1010 103 6 17 chrX 89682301 89682479 -76967817 + Lx LINE L1 6479 6654 0 3 1269 10023 82 5 3 chrX 89683076 89685097 -76965199 - L1Md_F2 LINE L1 -2 6580 4552 3 1269 2836 62 2 72 chrX 89685097 89685514 -76964782 + RLTR10 LTR ERVK 1 388 -2 3 1269 4117 146 19 17 chrX 89685526 89686844 -76963452 + RLTR10-int LTR ERVK 41 1594 -5987 3 1269 8304 35 3 11 chrX 89686926 89687931 -76962365 + RLTR10-int LTR ERVK 990 1986 -1 3 1269 2854 52 2 74 chrX 89687931 89688349 -76961947 + RLTR10 LTR ERVK 1 388 -2 3 1269 20685 83 6 6 chrX 89688350 89688536 -76961760 - L1Md_F LINE L1 -1325 4558 4374 3 1269 2246 48 0 40 chrX 89688536 89688837 -76961459 + L1Md_F3 LINE L1 6284 6572 -12 3 1269 20685 83 6 6 chrX 89688837 89691574 -76958722 - L1Md_F LINE L1 -1510 4373 1635 3 1269 3915 126 46 26 chrX 89691570 89692196 -76958100 - L1Md_F LINE L1 -5604 1012 374 3 1269 183 114 0 0 chrX 89692567 89692602 -76957694 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1269 832 229 8 101 chrX 89692874 89693112 -76957184 + B3 SINE B2 1 216 0 3 1269 35 0 0 0 chrX 89693119 89693154 -76957142 + AT_rich Low_complexity Low_complexity 1 35 0 3 1269 4687 154 49 13 chrX 89693155 89693985 -76956311 - RMER13A LTR ERVK 0 860 1 3 1269 313 333 43 0 chrX 89694075 89694213 -76956083 + MIR SINE MIR 91 234 -28 3 1269 1210 245 58 46 chrX 89695195 89695741 -76954555 + RMER19B LTR ERVK 1 556 -346 3 1269 714 170 14 36 chrX 89695721 89695861 -76954435 + RMER19B LTR ERVK 766 902 0 3 1269 574 271 15 22 chrX 89695947 89696083 -76954213 + ID_B1 SINE B4 87 221 -3 3 1269 360 0 0 0 chrX 89696518 89696558 -76953738 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 1269 1097 173 132 26 chrX 89697298 89697601 -76952695 + Lx9 LINE L1 7308 7642 -2 3 1269 491 263 81 81 chrX 89698003 89698152 -76952144 + B4 SINE B4 71 219 -73 3 1269 1024 53 0 15 chrX 89698025 89698160 -76952136 + B1_Mus1 SINE Alu 15 147 -1 3 1269 371 306 31 0 chrX 89698294 89698392 -76951904 + PB1D7 SINE Alu 1 101 -19 3 1269 3473 189 52 48 chrX 89698524 89698886 -76951410 + RMER6D LTR ERVK 1 366 -354 3 1269 2996 227 45 82 chrX 89698886 89699825 -76950471 + RMER13B LTR ERVK 5 908 0 3 1269 3473 189 52 48 chrX 89699825 89700175 -76950121 + RMER6D LTR ERVK 367 716 -4 3 1269 196 355 206 7 chrX 89700205 89700341 -76949955 - MIRb SINE MIR -101 167 5 3 1269 21 57 0 0 chrX 89700373 89700408 -76949888 + AT_rich Low_complexity Low_complexity 1 35 0 3 1269 23 97 0 0 chrX 89701029 89701101 -76949195 + AT_rich Low_complexity Low_complexity 1 72 0 3 1269 479 318 60 39 chrX 89701154 89701439 -76948857 - Kanga2_a DNA Tc2 -325 563 273 3 1269 1919 197 147 35 chrX 89701576 89702127 -76948169 + RMER6C LTR ERVK 1 613 -77 3 1269 513 294 45 19 chrX 89702125 89702281 -76948015 + B3 SINE B2 57 216 0 3 1269 1299 74 0 83 chrX 89702349 89702541 -76947755 + B2_Mm2 SINE B2 2 177 -18 3 1269 346 378 68 29 chrX 89702709 89703060 -76947236 + LTR33 LTR ERVL 108 512 -3 3 1269 627 269 0 48 chrX 89703466 89703490 -76946806 + ID_B1 SINE B4 60 219 -5 3 1269 882 201 0 0 chrX 89703490 89703634 -76946662 + B1_Mur2 SINE Alu 1 144 -5 3 1269 252 0 0 0 chrX 89703634 89703662 -76946634 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1269 440 336 29 7 chrX 89703662 89703800 -76946496 - B4A SINE B4 -80 212 72 3 1269 579 350 80 18 chrX 89704291 89704565 -76945731 - B4 SINE B4 -1 291 1 3 1269 343 173 13 0 chrX 89704824 89704899 -76945397 + L1M2 LINE L1 5647 5722 -569 3 1269 219 393 18 18 chrX 89704923 89705037 -76945259 + MIRm SINE MIR 20 133 -143 3 1269 184 300 67 0 chrX 89705132 89705192 -76945104 - L2a LINE L2 -15 3411 3348 3 1269 270 0 0 0 chrX 89705554 89705584 -76944712 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1269 3444 75 2 2 chrX 89706253 89706707 -76943589 + L1Md_F2 LINE L1 6127 6580 -2 3 1269 808 291 114 74 chrX 89707112 89707568 -76942728 + MLT1E3 LTR MaLR 1 534 -93 3 1269 656 204 35 0 chrX 89707568 89707710 -76942586 - B1_Mur1 SINE Alu -1 148 2 3 1269 808 290 40 99 chrX 89707710 89707812 -76942484 + MLT1E3 LTR MaLR 533 622 -2 3 1269 288 0 0 0 chrX 89708177 89708209 -76942087 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 1269 2333 33 0 0 chrX 89708560 89708833 -76941463 + L1Md_F2 LINE L1 5314 5586 -297 3 1269 8077 46 1 0 chrX 89708833 89709816 -76940480 + L1Md_F2 LINE L1 5587 6570 -12 3 1269 232 241 0 49 chrX 89711110 89711171 -76939125 + Tigger14a DNA MER2_type 4 61 -263 3 1269 528 16 0 0 chrX 89711239 89711300 -76938996 + (TTATA)n Simple_repeat Simple_repeat 4 64 0 3 1269 429 300 21 21 chrX 89711582 89711725 -76938571 + MER5A1 DNA MER1_type 16 158 -8 3 1269 334 330 0 10 chrX 89711735 89711836 -76938460 + PB1D10 SINE Alu 12 111 -6 3 1269 623 92 0 9 chrX 89711836 89711896 -76938400 + (GAA)n Simple_repeat Simple_repeat 1 60 0 3 1269 1463 22 11 0 chrX 89711896 89712074 -76938222 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 3 1269 623 92 0 9 chrX 89712074 89712123 -76938173 + (GAA)n Simple_repeat Simple_repeat 1 49 0 3 1269 322 143 13 13 chrX 89712323 89712401 -76937895 + GA-rich Low_complexity Low_complexity 3 80 0 3 1269 309 324 0 0 chrX 89712401 89712512 -76937784 + PB1D10 SINE Alu 6 116 -1 3 1269 597 230 7 13 chrX 89712604 89712758 -76937538 + Lx7 LINE L1 7369 7521 -175 3 1269 928 255 6 5 chrX 89713419 89713625 -76936671 + B3A SINE B2 2 201 -15 3 1269 207 0 0 0 chrX 89713948 89713971 -76936325 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1269 311 253 12 12 chrX 89714055 89714135 -76936161 - Lx7 LINE L1 -545 7151 7072 3 1269 716 225 149 32 chrX 89714135 89714383 -76935913 + MMVL30-int LTR ERV1 1899 2175 -1523 3 1269 4227 223 54 34 chrX 89714562 89715980 -76934316 + MMVL30-int LTR ERV1 2875 5555 -2051 3 1269 276 254 185 27 chrX 89715966 89716112 -76934184 + RLTR6-int LTR ERV1 7610 7778 0 3 1269 295 271 67 153 chrX 89716549 89716758 -76933538 + RLTR41 LTR ERV1 199 389 -57 3 1269 249 17 49 49 chrX 89717009 89717070 -76933226 + (CAAAAA)n Simple_repeat Simple_repeat 2 62 0 3 1269 1473 105 84 12 chrX 89719942 89720192 -76930104 - Lx2 LINE L1 -9 6988 6721 3 1269 1435 135 47 40 chrX 89721098 89721376 -76928920 + Lx3B LINE L1 6663 6942 -31 3 1269 1007 219 10 38 chrX 89721460 89721669 -76928627 + B3 SINE B2 2 204 -12 3 1269 364 298 82 8 chrX 89721739 89721861 -76928435 - MLT1A0 LTR MaLR -232 133 3 3 1269 2312 122 0 0 chrX 89722980 89723307 -76926989 - ORR1A2 LTR MaLR 0 327 1 3 1269 1312 144 5 0 chrX 89723307 89723515 -76926781 - ORR1A2-int LTR MaLR 0 1963 1755 3 1269 21 36 0 0 chrX 89723756 89723784 -76926512 + AT_rich Low_complexity Low_complexity 1 28 0 3 1269 1038 229 0 36 chrX 89724354 89724576 -76925720 + Lx6 LINE L1 7207 7420 -40 3 1269 557 361 76 27 chrX 89725112 89725374 -76924922 + MLT1H LTR MaLR 88 362 -187 3 1269 434 39 0 0 chrX 89725773 89725824 -76924472 - Lx2B LINE L1 -1071 5929 5879 3 1269 5511 137 60 25 chrX 89725824 89726832 -76923464 + Lx2B LINE L1 5953 6996 -4 3 1269 308 298 97 0 chrX 89727671 89727795 -76922501 - MER3 DNA MER1_type -42 167 32 3 1269 413 332 63 14 chrX 89728808 89729031 -76921265 + L3b LINE CR1 7 240 -242 3 1269 5450 83 33 10 chrX 89729099 89729889 -76920407 - RLTR13C2 LTR ERVK 0 808 1 3 1269 469 296 152 53 chrX 89730381 89730750 -76919546 + MLT1A1 LTR MaLR 3 408 0 3 1269 284 315 73 9 chrX 89730792 89730901 -76919395 - L2a LINE L2 0 3426 3311 3 1269 984 108 116 29 chrX 89730913 89731085 -76919211 - B2_Mm2 SINE B2 -8 187 1 3 1269 378 384 49 18 chrX 89731151 89731477 -76918819 - L2a LINE L2 -580 2839 2504 3 1269 241 354 43 113 chrX 89731807 89731992 -76918304 - MLT1H LTR MaLR -148 401 230 3 1269 222 37 0 0 chrX 89732436 89732463 -76917833 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1269 857 46 0 0 chrX 89732463 89732572 -76917724 - B1_Mus1 SINE Alu 0 148 40 3 1269 24 77 0 0 chrX 89733442 89733494 -76916802 + AT_rich Low_complexity Low_complexity 1 52 0 3 1269 1949 237 14 40 chrX 89733930 89734265 -76916031 - RMER6D LTR ERVK -12 708 373 3 1269 480 18 0 0 chrX 89734265 89734322 -76915974 + (TC)n Simple_repeat Simple_repeat 1 57 0 3 1269 1949 237 14 40 chrX 89734322 89734359 -76915937 - RMER6D LTR ERVK -348 372 351 3 1269 243 0 0 0 chrX 89734359 89734386 -76915910 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 1269 1949 237 14 40 chrX 89734386 89734517 -76915779 - RMER6D LTR ERVK -370 350 218 3 1269 858 217 48 18 chrX 89734519 89734762 -76915534 + Lx4B LINE L1 6726 7058 0 3 1269 414 57 0 0 chrX 89736222 89736275 -76914021 + ORR1A3 LTR MaLR 274 326 0 3 1269 1024 229 84 55 chrX 89736276 89736585 -76913711 + Lx6 LINE L1 7143 7460 0 3 1269 1555 33 0 6 chrX 89736983 89737166 -76913130 + B2_Mm2 SINE B2 3 184 -11 3 1269 186 171 0 0 chrX 89737338 89737379 -76912917 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1269 235 224 15 0 chrX 89737489 89737556 -76912740 + L1M3 LINE L1 2110 2177 -3963 3 1269 817 29 0 0 chrX 89737557 89737662 -76912634 + B1_Mm SINE Alu 2 106 -41 3 1269 615 287 76 20 chrX 89737688 89738083 -76912213 + L1M3 LINE L1 2290 2706 -3434 3 1269 511 270 25 35 chrX 89738082 89738285 -76912011 + L1M3 LINE L1 2602 2802 -3338 3 1269 384 310 92 8 chrX 89738336 89738466 -76911830 - B1F SINE Alu -8 141 1 3 1269 285 235 59 0 chrX 89738466 89738551 -76911745 + L1M3 LINE L1 2791 2880 -3260 3 1269 432 245 43 0 chrX 89738556 89738650 -76911646 - PB1D7 SINE Alu 0 120 23 3 1269 479 225 101 35 chrX 89738656 89738914 -76911382 + L1M3 LINE L1 2867 3141 -2999 3 1269 562 255 13 19 chrX 89738945 89739101 -76911195 + L1_Rod LINE L1 5420 5574 -273 3 1269 1465 243 20 54 chrX 89739097 89739695 -76910601 + Lx9 LINE L1 5467 6084 -1560 4 1269 293 127 25 25 chrX 89739725 89739806 -76910490 + (TA)n Simple_repeat Simple_repeat 2 82 0 4 1269 546 16 0 0 chrX 89740555 89740618 -76909678 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 1269 4883 42 3 0 chrX 89740989 89741586 -76908710 - L1Md_F2 LINE L1 -1 6581 5983 4 1269 355 193 126 0 chrX 89742058 89742177 -76908119 - Lx9 LINE L1 -8 7636 7503 4 1269 198 0 0 0 chrX 89742180 89742202 -76908094 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 4 1269 995 226 14 5 chrX 89742507 89742716 -76907580 + B3 SINE B2 1 211 -5 4 1269 785 263 36 10 chrX 89742757 89742953 -76907343 + B3 SINE B2 2 202 -14 4 1269 423 0 0 0 chrX 89744086 89744133 -76906163 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1269 194 91 0 29 chrX 89744140 89744174 -76906122 + (GGGA)n Simple_repeat Simple_repeat 2 34 0 4 1269 1435 257 24 3 chrX 89744720 89745056 -76905240 - Lx6 LINE L1 0 7460 7118 4 1269 1927 245 56 21 chrX 89745056 89745573 -76904723 - Lx6 LINE L1 -828 6632 6098 4 1269 254 278 61 143 chrX 89745859 89745938 -76904358 + MLT1H LTR MaLR 415 479 -70 4 1269 885 173 0 0 chrX 89745938 89746077 -76904219 - B1_Mus1 SINE Alu -9 139 1 4 1269 254 278 61 143 chrX 89746077 89746144 -76904152 + MLT1H LTR MaLR 480 549 0 4 1269 2015 47 4 52 chrX 89746144 89746416 -76903880 - L1Md_F2 LINE L1 -207 6375 6117 4 1269 1146 96 0 22 chrX 89746416 89746597 -76903699 + L1Md_F2 LINE L1 6396 6572 -10 4 1269 548 101 50 0 chrX 89746605 89746704 -76903592 + L1_Mus2 LINE L1 6463 6566 0 4 1269 217 250 0 150 chrX 89747231 89747311 -76902985 - ID4_ SINE ID -12 71 4 4 1269 524 84 10 10 chrX 89747560 89747656 -76902640 - L1Md_F2 LINE L1 0 6582 6487 4 1269 262 154 102 71 chrX 89747899 89747997 -76902299 + L1MA6 LINE L1 6094 6194 -106 4 1269 1915 168 28 22 chrX 89748283 89748641 -76901655 + ORR1B1 LTR MaLR 3 394 0 4 1269 496 346 61 52 chrX 89748701 89749140 -76901156 + L1MEc LINE L1 1988 2427 -3988 4 1269 211 171 13 13 chrX 89749388 89749465 -76900831 + A-rich Low_complexity Low_complexity 4 80 0 4 1269 595 238 14 27 chrX 89749527 89749674 -76900622 - Lx7 LINE L1 -376 7320 7176 4 1269 1346 127 32 0 chrX 89749699 89749919 -76900377 - Lx2 LINE L1 -1 6996 6770 4 1269 1685 274 56 30 chrX 89750142 89750680 -76899616 + Lx8 LINE L1 6920 7471 -2 4 1269 384 208 13 13 chrX 89752464 89752542 -76897754 - ID_B1 SINE B4 -38 186 109 4 1269 231 317 0 24 chrX 89752535 89752619 -76897677 - PB1D10 SINE Alu -35 82 1 4 1269 32 81 0 0 chrX 89753978 89754052 -76896244 + AT_rich Low_complexity Low_complexity 1 74 0 4 1269 632 240 8 0 chrX 89754371 89754500 -76895796 + B1_Mus1 SINE Alu 2 131 -17 4 1269 844 155 12 0 chrX 89754548 89754709 -76895587 + GA-rich Low_complexity Low_complexity 2 164 0 4 1269 342 232 192 3 chrX 89754709 89754800 -76895496 + B1_Mur2 SINE Alu 40 140 -9 4 1269 189 214 0 0 chrX 89754800 89754842 -76895454 + GA-rich Low_complexity Low_complexity 1 42 0 4 1269 301 248 87 19 chrX 89754896 89754999 -76895297 + PB1D7 SINE Alu 5 114 -6 4 1269 328 181 0 97 chrX 89755395 89755471 -76894825 + L1MA5 LINE L1 5698 5766 -534 4 1269 342 0 0 0 chrX 89755471 89755509 -76894787 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1269 320 257 12 169 chrX 89755509 89755675 -76894621 + L1MA5 LINE L1 5767 5902 -398 4 1269 543 170 0 0 chrX 89755879 89755979 -76894317 + (TA)n Simple_repeat Simple_repeat 1 100 0 4 1269 223 235 0 0 chrX 89756302 89756353 -76893943 + CT-rich Low_complexity Low_complexity 1 51 0 4 1269 1539 215 88 6 chrX 89756965 89757306 -76892990 - ORR1D1 LTR MaLR -5 369 1 4 1269 303 278 0 30 chrX 89757507 89757607 -76892689 - L1MA9 LINE L1 -285 6027 5931 4 1269 471 261 98 49 chrX 89757654 89757900 -76892396 + L1M2 LINE L1 5554 5811 -501 4 1269 575 149 0 9 chrX 89758074 89758182 -76892114 + (TA)n Simple_repeat Simple_repeat 1 107 0 4 1269 768 22 0 0 chrX 89758182 89758272 -76892024 + (TG)n Simple_repeat Simple_repeat 1 90 0 4 1269 525 208 9 0 chrX 89758272 89758378 -76891918 + MTE2a LTR MaLR 273 379 0 4 1269 823 273 19 9 chrX 89758500 89758711 -76891585 + B3 SINE B2 1 213 -3 4 1269 23 0 0 0 chrX 89758725 89758748 -76891548 + AT_rich Low_complexity Low_complexity 1 23 0 4 1269 264 140 70 0 chrX 89758777 89758834 -76891462 - Lx2B LINE L1 -6 6994 6934 4 1269 2425 79 22 35 chrX 89758877 89759245 -76891051 + L1Md_F2 LINE L1 6220 6582 0 4 1269 610 315 10 0 chrX 89759257 89759457 -76890839 + MER2 DNA MER2_type 136 337 -8 4 1269 313 183 0 32 chrX 89759465 89759527 -76890769 + MER58B DNA MER1_type 154 213 -128 4 1269 414 0 0 0 chrX 89759902 89759948 -76890348 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1269 219 167 0 0 chrX 89760056 89760098 -76890198 + GA-rich Low_complexity Low_complexity 4 45 0 4 1269 385 348 72 41 chrX 89760428 89760623 -76889673 - MER20 DNA MER1_type -18 201 1 4 1269 340 306 48 10 chrX 89760640 89760774 -76889522 + PB1D10 SINE Alu 4 149 0 4 1269 359 77 0 0 chrX 89762064 89762129 -76888167 - L1_Mus3 LINE L1 -3 6635 6571 4 1269 222 367 147 6 chrX 89762281 89762451 -76887845 - MIR SINE MIR -66 196 3 4 1269 397 287 0 56 chrX 89762571 89762678 -76887618 + ID_B1 SINE B4 91 191 -33 4 1269 295 278 0 156 chrX 89762678 89762699 -76887597 + PB1D10 SINE Alu 10 117 0 4 1269 915 103 96 6 chrX 89762778 89762944 -76887352 + L1_Mus4 LINE L1 6454 6634 -2 4 1269 248 256 0 13 chrX 89763468 89763538 -76886758 + (TA)n Simple_repeat Simple_repeat 1 70 0 4 1269 700 292 14 23 chrX 89763538 89763752 -76886544 + B3 SINE B2 5 216 0 4 1269 248 256 0 13 chrX 89763752 89763760 -76886536 + (TA)n Simple_repeat Simple_repeat 1 8 0 4 1269 681 255 0 0 chrX 89763760 89763901 -76886395 - B1_Mur2 SINE Alu -8 141 1 4 1269 288 77 0 0 chrX 89764121 89764160 -76886136 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1269 1609 258 44 39 chrX 89764856 89765280 -76885016 - MTD LTR MaLR -16 403 1 4 1269 372 338 42 7 chrX 89766157 89766300 -76883996 - B1F1 SINE Alu -1 148 1 4 1269 232 335 73 52 chrX 89767560 89767752 -76882544 - MARNA DNA Mariner -20 566 371 4 1269 270 278 33 11 chrX 89768217 89768308 -76881988 - MLT1C LTR MaLR -2 465 373 4 1269 4748 205 58 15 chrX 89768356 89769347 -76880949 + Lx6 LINE L1 6425 7457 -3 4 1269 1924 60 0 4 chrX 89769375 89769627 -76880669 + L1Md_F2 LINE L1 6332 6582 0 4 1269 683 318 25 15 chrX 89769759 89769957 -76880339 - RMER30 DNA MER1_type -2 200 1 4 1269 24 0 0 0 chrX 89769964 89769988 -76880308 + AT_rich Low_complexity Low_complexity 1 24 0 4 1269 247 315 67 11 chrX 89770266 89770356 -76879940 + MIRb SINE MIR 37 131 -137 4 1269 23 33 0 0 chrX 89771089 89771119 -76879177 + AT_rich Low_complexity Low_complexity 1 30 0 4 1269 450 272 29 7 chrX 89772343 89772480 -76877816 - B1F SINE Alu -9 140 1 4 1269 587 308 48 65 chrX 89773047 89773199 -76877097 - MTEa LTR MaLR -99 280 133 4 1269 2793 159 18 22 chrX 89773199 89773700 -76876596 + RLTR19 LTR ERVK 1 499 0 4 1269 587 308 48 65 chrX 89773700 89773776 -76876520 - MTEa LTR MaLR -247 132 56 4 1269 208 184 92 0 chrX 89773789 89773865 -76876431 + (TTGG)n Simple_repeat Simple_repeat 1 83 0 4 1269 653 211 42 14 chrX 89773865 89774009 -76876287 - B1_Mus1 SINE Alu 0 148 1 4 1269 1094 75 7 0 chrX 89774045 89774191 -76876105 - B1_Mus2 SINE Alu 0 147 1 4 1269 687 191 79 22 chrX 89774195 89774334 -76875962 - B1_Mur3 SINE Alu 0 149 3 4 1269 475 216 147 0 chrX 89774596 89774698 -76875598 - ID_B1 SINE B4 -5 219 103 4 1269 1225 74 91 0 chrX 89774704 89774880 -76875416 - B2_Mm2 SINE B2 -2 193 2 4 1269 180 0 0 0 chrX 89774900 89774920 -76875376 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 4 1269 2911 32 3 3 chrX 89775415 89775761 -76874535 + ORR1A1 LTR MaLR 1 346 0 4 1269 1081 220 98 78 chrX 89775838 89776502 -76873794 - RMER6A LTR ERVK 0 720 138 4 1269 1571 44 5 5 chrX 89776502 89776707 -76873589 - L1Md_F2 LINE L1 -12 6570 6366 4 1269 1081 140 71 95 chrX 89776707 89776803 -76873493 - RMER6A LTR ERVK -619 137 1 4 1269 1270 7 0 0 chrX 89777074 89777224 -76873072 - L1Md_A LINE L1 0 6582 6433 4 1269 193 297 32 21 chrX 89777294 89777387 -76872909 - L3 LINE CR1 -2234 2255 2162 4 1269 702 198 77 77 chrX 89777430 89777611 -76872685 + MER58A DNA MER1_type 40 220 -4 4 1269 303 271 43 70 chrX 89777675 89777790 -76872506 + L1M5 LINE L1 5329 5440 -724 4 1269 279 355 0 108 chrX 89777794 89777914 -76872382 + PB1D10 SINE Alu 10 116 -1 4 1269 290 288 35 18 chrX 89777951 89778064 -76872232 + PB1D7 SINE Alu 1 115 -5 4 1269 576 313 89 31 chrX 89780096 89780320 -76869976 + B4A SINE B4 2 238 -54 4 1269 216 322 54 65 chrX 89780535 89780628 -76869668 + ID_B1 SINE B4 84 175 -49 4 1269 291 309 64 2 chrX 89780996 89781095 -76869201 + B1F1 SINE Alu 10 118 -29 4 1269 849 292 115 36 chrX 89781199 89781615 -76868681 - Tigger8 DNA MER2_type -216 450 2 4 1269 327 264 52 52 chrX 89781878 89782014 -76868282 + MER31B LTR ERV1 181 316 -150 4 1269 727 306 93 48 chrX 89782177 89782646 -76867650 + L1MA4A LINE L1 5094 5603 -697 4 1269 896 143 48 36 chrX 89782646 89782813 -76867483 + Lx7 LINE L1 7528 7696 0 4 1269 727 310 62 55 chrX 89782813 89783078 -76867218 + L1MA4A LINE L1 5604 5885 -418 4 1269 336 323 4 0 chrX 89783262 89783350 -76866946 + ID4_ SINE ID 1 90 -62 4 158 673 343 43 8 chrX 89784158 89784393 -76865903 - MLT1F2 LTR MaLR -2 558 316 4 1270 549 30 0 0 chrX 89784616 89784683 -76865613 + (TC)n Simple_repeat Simple_repeat 2 68 0 5 1270 400 386 62 62 chrX 89784713 89784989 -76865307 - B4 SINE B4 0 292 17 5 1270 292 258 160 0 chrX 89785080 89785301 -76864995 + L1ME1 LINE L1 5698 5953 -491 5 1270 7689 47 2 7 chrX 89785702 89786657 -76863639 + L1Md_F2 LINE L1 5621 6570 -12 5 1270 21 0 0 0 chrX 89787245 89787266 -76863030 + AT_rich Low_complexity Low_complexity 1 21 0 5 1270 339 65 0 0 chrX 89787562 89787608 -76862688 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1270 1814 127 81 100 chrX 89788107 89788476 -76861820 + ORR1B2 LTR MaLR 6 367 0 5 1270 2651 204 53 82 chrX 89788491 89789152 -76861144 - RLTR26 LTR ERVK 0 642 1 5 1270 1588 241 106 0 chrX 89789167 89789487 -76860809 + Lx5 LINE L1 6593 6946 -104 5 1270 186 43 0 0 chrX 89789490 89789513 -76860783 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 5 1270 339 279 47 0 chrX 89789524 89789610 -76860686 + MTEb LTR MaLR 125 214 -165 5 1270 798 81 0 0 chrX 89789610 89789721 -76860575 + (TA)n Simple_repeat Simple_repeat 1 111 0 5 1270 6161 58 9 11 chrX 89789727 89790542 -76859754 - L1Md_F2 LINE L1 -5 6577 5765 5 1270 22 35 0 0 chrX 89790642 89790671 -76859625 + AT_rich Low_complexity Low_complexity 1 29 0 5 1270 1105 191 33 41 chrX 89790774 89791019 -76859277 + Lx7 LINE L1 7454 7696 0 5 1270 228 337 0 11 chrX 89791728 89791815 -76858481 + GA-rich Low_complexity Low_complexity 3 88 0 5 1270 183 80 0 0 chrX 89792111 89792136 -76858160 + (CTTG)n Simple_repeat Simple_repeat 3 27 0 5 1270 687 46 0 0 chrX 89792249 89792336 -76857960 + (CA)n Simple_repeat Simple_repeat 1 87 0 5 1270 988 156 172 0 chrX 89792480 89792672 -76857624 - URR1B DNA MER1_type 0 225 1 5 1270 324 336 52 52 chrX 89794719 89794739 -76855557 + B4 SINE B4 69 222 -70 5 1270 667 216 60 0 chrX 89794739 89794873 -76855423 + B1_Mur2 SINE Alu 5 146 -3 5 1270 283 307 82 133 chrX 89796225 89796458 -76853838 - ORR1E LTR MaLR -42 317 97 5 1270 1882 133 108 33 chrX 89796464 89796798 -76853498 - ORR1B2 LTR MaLR -8 359 1 5 1270 299 312 13 13 chrX 89796816 89796894 -76853402 - ORR1E LTR MaLR -278 81 4 5 1270 279 0 0 0 chrX 89797063 89797094 -76853202 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 5 1270 334 351 70 13 chrX 89797191 89797347 -76852949 + MIR SINE MIR 88 252 -10 5 1270 596 276 41 7 chrX 89797464 89797610 -76852686 + B3A SINE B2 1 151 -47 5 1270 312 83 0 0 chrX 89797617 89797665 -76852631 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1270 662 145 7 0 chrX 89797665 89797817 -76852479 + GA-rich Low_complexity Low_complexity 1 153 0 5 1270 307 330 69 10 chrX 89799523 89799624 -76850672 - PB1D10 SINE Alu -8 109 3 5 1270 885 275 16 72 chrX 89799803 89800109 -76850187 + B4A SINE B4 4 292 0 5 1270 386 298 116 0 chrX 89800270 89800391 -76849905 + ID_B1 SINE B4 90 224 0 5 1270 303 71 0 0 chrX 89800407 89800449 -76849847 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1270 369 0 0 0 chrX 89800449 89800489 -76849807 + (GA)n Simple_repeat Simple_repeat 2 42 0 5 1270 324 0 0 0 chrX 89800549 89800585 -76849711 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 5 1270 2436 161 29 16 chrX 89800606 89801048 -76849248 - MTC-int LTR MaLR -810 448 1 5 1270 2214 149 8 168 chrX 89801048 89801549 -76848747 - MTC LTR MaLR 0 421 1 5 1270 579 294 45 11 chrX 89801551 89801607 -76848689 + Lx8 LINE L1 7146 7201 -272 5 1270 1295 95 0 25 chrX 89801607 89801811 -76848485 + L1_Mus4 LINE L1 6431 6629 -7 5 1270 579 294 45 11 chrX 89801811 89801933 -76848363 + Lx8 LINE L1 7202 7329 -144 5 1270 293 361 70 29 chrX 89802219 89802390 -76847906 - MLT1F LTR MaLR -311 237 60 5 1270 418 314 74 52 chrX 89802895 89803229 -76847067 - MLT1A1 LTR MaLR -16 392 1 5 1270 3242 171 93 8 chrX 89803594 89804252 -76846044 + Lx9 LINE L1 6898 7611 -33 5 1270 260 354 59 37 chrX 89804527 89804662 -76845634 - MLT1I LTR MaLR -245 166 29 5 1270 228 227 58 138 chrX 89805522 89805609 -76844687 + ID4 SINE ID 2 81 -2 5 1270 268 273 11 22 chrX 89805713 89805803 -76844493 + MLT1B LTR MaLR 38 126 -248 5 1270 292 205 84 176 chrX 89805791 89805933 -76844363 + MLT1B LTR MaLR 237 365 -25 5 1270 654 261 62 29 chrX 89805948 89806157 -76844139 - B3 SINE B2 0 216 1 5 1270 681 117 0 30 chrX 89806203 89806335 -76843961 + Lx LINE L1 6527 6654 0 5 1270 244 340 46 28 chrX 89806421 89806530 -76843766 + MLT1H LTR MaLR 66 176 -373 5 1270 276 290 194 7 chrX 89806689 89806828 -76843468 + MLT1H LTR MaLR 385 549 0 5 1270 3090 49 5 3 chrX 89807507 89807893 -76842403 - L1_Mus1 LINE L1 0 6567 6181 5 1270 211 72 0 45 chrX 89810613 89810657 -76839639 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 5 1270 298 306 18 27 chrX 89810832 89810943 -76839353 + MER5B DNA MER1_type 10 119 -59 5 1270 298 331 14 35 chrX 89811019 89811163 -76839133 - L1ME2z LINE L1 -348 6096 5956 5 1270 436 266 62 43 chrX 89811205 89811366 -76838930 - MER5A1 DNA MER1_type -2 164 1 5 1270 248 300 0 0 chrX 89811434 89811504 -76838792 - Lx7 LINE L1 -495 7201 7132 5 1270 3380 165 18 90 chrX 89811508 89812299 -76837997 + L1_Mur3 LINE L1 3525 4258 -1622 5 1270 5454 19 2 0 chrX 89812640 89813268 -76837028 + L1Md_A LINE L1 5954 6582 0 5 1270 21787 21 0 0 chrX 89813595 89816149 -76834147 + L1Md_T LINE L1 3033 5586 -297 5 1270 8967 6 0 0 chrX 89816149 89817145 -76833151 + L1Md_T LINE L1 5587 6582 0 5 1270 310 250 0 65 chrX 89817163 89817240 -76833056 + ID4 SINE ID 12 83 0 5 1270 37144 23 1 8 chrX 89817628 89822836 -76827460 + L1Md_A LINE L1 416 5586 -297 5 1270 8291 37 1 0 chrX 89822836 89823831 -76826465 + L1Md_A LINE L1 5587 6582 0 5 1270 2698 131 24 60 chrX 89823968 89824023 -76826273 + RLTR28 LTR ERVL 27 84 -440 5 1270 252 0 0 0 chrX 89824023 89824051 -76826245 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 5 1270 2698 131 24 60 chrX 89824051 89824497 -76825799 + RLTR28 LTR ERVL 85 509 -15 5 1270 408 221 67 30 chrX 89824603 89824686 -76825610 - ORR1E LTR MaLR 0 370 289 5 1270 333 0 0 0 chrX 89824686 89824723 -76825573 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 1270 408 221 67 30 chrX 89824723 89824774 -76825522 - ORR1E LTR MaLR -82 288 231 5 1270 251 154 15 0 chrX 89824774 89824839 -76825457 + GA-rich Low_complexity Low_complexity 1 66 0 5 1270 1044 264 49 30 chrX 89824845 89825111 -76825185 - ORR1E LTR MaLR -85 274 4 5 1270 736 347 50 35 chrX 89825213 89825637 -76824659 + MLT1H LTR MaLR 117 546 -3 5 1270 300 294 58 16 chrX 89825721 89825842 -76824454 + L1M5 LINE L1 5686 5811 -353 5 1270 300 27 0 0 chrX 89825888 89825925 -76824371 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1270 24 67 0 0 chrX 89826333 89826378 -76823918 + AT_rich Low_complexity Low_complexity 1 45 0 5 1270 252 326 11 33 chrX 89826738 89826830 -76823466 + MamRep605 Unknown Unknown 87 176 -700 5 1270 377 363 65 82 chrX 89826891 89827197 -76823099 + MLT1H LTR MaLR 84 384 -165 5 1270 284 359 26 0 chrX 89827424 89827541 -76822755 + MamRep605 Unknown Unknown 430 549 -327 5 1270 183 284 27 144 chrX 89828171 89828282 -76822014 + L4 LINE RTE 1011 1108 -921 5 1270 761 79 177 7 chrX 89828584 89828725 -76821571 + L1Md_F2 LINE L1 6407 6571 -11 5 1270 354 108 0 0 chrX 89828779 89828844 -76821452 + (CAAA)n Simple_repeat Simple_repeat 2 66 0 5 1270 267 103 0 0 chrX 89829672 89829711 -76820585 + (T)n Simple_repeat Simple_repeat 1 39 0 5 1270 1052 251 24 31 chrX 89830220 89830508 -76819788 + Lx7 LINE L1 7065 7350 -346 5 1270 231 36 0 0 chrX 89830552 89830580 -76819716 + (CAGAGA)n Simple_repeat Simple_repeat 6 33 0 5 1270 623 125 0 0 chrX 89830676 89830764 -76819532 - B1_Mur4 SINE Alu -8 142 55 5 1270 911 201 132 5 chrX 89830764 89830984 -76819312 + Lx3C LINE L1 6718 6965 -11 5 1270 630 39 0 0 chrX 89830985 89831062 -76819234 + (GAAAA)n Simple_repeat Simple_repeat 3 79 0 5 1270 1107 53 0 0 chrX 89831072 89831205 -76819091 - L1_Mus2 LINE L1 -188 6378 6246 5 1270 1246 122 28 5 chrX 89831208 89831423 -76818873 + L1_Mus3 LINE L1 6413 6632 -6 5 1270 279 266 0 111 chrX 89831454 89831526 -76818770 - B1_Mur4 SINE Alu -85 65 2 5 1270 517 181 47 9 chrX 89832124 89832230 -76818066 - Lx9 LINE L1 -612 7032 6923 5 1270 690 241 0 0 chrX 89832230 89832371 -76817925 + B1_Mur2 SINE Alu 1 141 -8 5 1270 21 36 0 0 chrX 89832371 89832399 -76817897 + AT_rich Low_complexity Low_complexity 1 28 0 5 1270 367 288 196 14 chrX 89833583 89833731 -76816565 - MER5A DNA MER1_type -12 177 3 5 1270 269 293 179 26 chrX 89834504 89834655 -76815641 + LTR50 LTR ERVL 295 468 -327 5 1270 305 275 55 0 chrX 89834789 89834880 -76815416 - RMER15 LTR ERVL -13 562 467 5 1270 253 333 70 0 chrX 89835079 89835208 -76815088 - Lx8 LINE L1 -299 7174 7037 5 1270 1180 103 35 0 chrX 89837028 89837202 -76813094 + B2_Mm2 SINE B2 2 181 -14 5 1270 449 72 286 8 chrX 89837229 89837337 -76812959 + B2_Mm2 SINE B2 46 188 -7 5 1270 285 299 92 10 chrX 89837579 89837677 -76812619 - B3 SINE B2 -14 202 97 5 1270 261 279 0 44 chrX 89837747 89837837 -76812459 + MTEa LTR MaLR 275 360 -19 5 1270 253 231 15 44 chrX 89841601 89841669 -76808627 + L2a LINE L2 3347 3412 -14 5 1270 266 184 0 4 chrX 89841623 89841675 -76808621 + MIRb SINE MIR 208 258 -4 5 1270 276 328 0 101 chrX 89843646 89843795 -76806501 + MER5B DNA MER1_type 21 154 -24 5 1270 237 345 84 28 chrX 89843910 89844053 -76806243 + MER5B DNA MER1_type 28 178 0 5 1270 195 211 0 0 chrX 89844587 89844625 -76805671 + MER5B DNA MER1_type 141 178 0 5 1270 849 305 64 40 chrX 89845310 89845686 -76804610 + Lx8 LINE L1 7087 7471 -2 5 1270 1695 155 3 19 chrX 89846220 89846543 -76803753 + L1_Mur3 LINE L1 3611 3928 -1952 5 1270 1879 189 33 0 chrX 89846546 89846937 -76803359 + L1_Mur3 LINE L1 4875 5278 -602 5 1270 34081 73 8 7 chrX 89846938 89851930 -76798366 + Lx6 LINE L1 625 5587 -296 5 1270 8097 42 9 0 chrX 89851930 89852918 -76797378 + L1Md_F3 LINE L1 5588 6584 0 5 1270 500 76 0 0 chrX 89852928 89853007 -76797289 + L1Md_F2 LINE L1 6502 6580 -2 5 1270 34081 155 57 11 chrX 89853007 89853695 -76796601 + Lx6 LINE L1 5592 6320 -1140 5 1270 1801 179 63 18 chrX 89853704 89854039 -76796257 + ORR1B2 LTR MaLR 11 360 -7 5 1270 3427 234 93 23 chrX 89854058 89855115 -76795181 + Lx6 LINE L1 6326 7449 -11 5 1270 229 275 144 26 chrX 89855644 89855797 -76794499 + MIRc SINE MIR 81 251 -17 6 1270 207 0 0 0 chrX 89855869 89855892 -76794404 + (GA)n Simple_repeat Simple_repeat 1 23 0 6 1270 1218 266 88 7 chrX 89855906 89856212 -76794084 + MTEa LTR MaLR 35 365 -14 6 1270 4967 294 45 35 chrX 89856293 89858103 -76792193 + MTEa-int LTR MaLR 1 1580 0 6 1270 833 224 57 0 chrX 89858443 89858650 -76791646 - Charlie1a DNA MER1_type -297 1158 940 6 1270 1076 144 6 0 chrX 89858650 89858817 -76791479 + B2_Mm2 SINE B2 2 169 -26 6 1270 1665 118 39 14 chrX 89858853 89859136 -76791160 - Lx LINE L1 -8 6646 6357 6 1270 1795 135 52 13 chrX 89859135 89859442 -76790854 + Lx2 LINE L1 6679 6997 0 6 1270 701 215 15 119 chrX 89859529 89859730 -76790566 + L1VL1 LINE L1 196 375 -6047 6 1270 2301 92 11 74 chrX 89859744 89860179 -76790117 + L1_Mm LINE L1 1312 1719 -4164 6 1270 34852 48 6 3 chrX 89860178 89865582 -76784714 + L1Md_T LINE L1 77 5589 -297 6 1270 8427 33 0 0 chrX 89865583 89866578 -76783718 + L1Md_T LINE L1 5591 6585 0 6 1270 27527 101 6 9 chrX 89866578 89871451 -76778845 + L1_Mus2 LINE L1 1707 6564 -2 6 1270 226 307 13 26 chrX 89871625 89871702 -76778594 - ID2 SINE ID -2 81 6 6 1270 198 118 0 0 chrX 89871962 89871996 -76778300 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 6 1270 27 0 0 0 chrX 89872293 89872320 -76777976 + AT_rich Low_complexity Low_complexity 1 27 0 6 1270 283 312 62 0 chrX 89872447 89872543 -76777753 + PB1D10 SINE Alu 1 102 -15 6 1270 237 307 13 0 chrX 89874003 89874078 -76776218 + GA-rich Low_complexity Low_complexity 2 77 0 6 1270 241 273 153 94 chrX 89874661 89874831 -76775465 + MLT1C LTR MaLR 286 465 -2 6 1270 565 254 36 14 chrX 89874863 89875003 -76775293 + B1_Mur1 SINE Alu 5 147 -2 6 1270 31587 90 16 4 chrX 89875243 89880562 -76769734 + L1Md_F2 LINE L1 203 5585 -298 6 1270 7571 72 0 17 chrX 89880563 89881576 -76768720 + L1Md_F2 LINE L1 5587 6582 0 6 1270 519 17 0 0 chrX 89882058 89882118 -76768178 + (TG)n Simple_repeat Simple_repeat 1 60 0 6 1270 212 116 23 23 chrX 89882558 89882602 -76767694 + T-rich Low_complexity Low_complexity 2 45 0 6 1270 237 293 17 0 chrX 89883138 89883196 -76767100 + RSINE1 SINE B4 5 63 -102 6 1270 5198 241 120 21 chrX 89883196 89885310 -76764986 + Lx9 LINE L1 5160 7517 -127 6 1270 249 222 0 0 chrX 89885335 89885398 -76764898 + (TA)n Simple_repeat Simple_repeat 2 64 0 6 1270 270 204 192 61 chrX 89885398 89885459 -76764837 + Lx9 LINE L1 7419 7475 -169 6 1270 324 120 0 0 chrX 89885459 89885509 -76764787 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 1270 270 204 192 61 chrX 89885509 89885645 -76764651 + Lx9 LINE L1 7476 7642 -2 6 1270 619 267 8 0 chrX 89885731 89885851 -76764445 + RSINE1 SINE B4 2 122 -43 6 1270 1829 182 179 7 chrX 89886130 89886583 -76763713 + MT2A LTR ERVL 1 531 -2 6 1270 707 234 20 80 chrX 89888094 89888294 -76762002 + B3A SINE B2 2 189 -27 6 1270 992 216 124 91 chrX 89888389 89888664 -76761632 - B4A SINE B4 0 292 9 6 1270 240 242 34 0 chrX 89889357 89889450 -76760846 - MIRc SINE MIR -3 259 164 6 1270 832 248 39 10 chrX 89889478 89889686 -76760610 - B3 SINE B2 0 216 3 6 1270 768 101 9 2 chrX 89889814 89889929 -76760367 + L1Md_F2 LINE L1 5485 5616 -696 6 1270 7384 47 52 1 chrX 89889929 89890864 -76759432 + L1Md_F2 LINE L1 5588 6570 -12 6 1270 240 111 0 0 chrX 89890900 89890945 -76759351 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 6 1270 3517 219 72 11 chrX 89891048 89891908 -76758388 + Lx9 LINE L1 6725 7637 -7 6 1270 509 120 206 0 chrX 89891941 89892033 -76758263 - MTC LTR MaLR -301 120 10 6 1270 218 287 103 77 chrX 89892158 89892275 -76758021 - MIRc SINE MIR -142 126 7 6 1270 192 77 0 0 chrX 89892499 89892525 -76757771 + (CATA)n Simple_repeat Simple_repeat 1 26 0 6 1270 561 30 0 0 chrX 89892525 89892591 -76757705 + (GA)n Simple_repeat Simple_repeat 2 68 0 6 1270 270 294 35 12 chrX 89892622 89892708 -76757588 + L2a LINE L2 2917 3004 -422 6 1270 21 36 0 0 chrX 89892778 89892806 -76757490 + AT_rich Low_complexity Low_complexity 1 28 0 6 1270 378 301 0 11 chrX 89892826 89892920 -76757376 - RSINE1 SINE B4 -27 138 46 6 1270 1896 180 102 7 chrX 89893166 89893569 -76756727 - Lx2B LINE L1 -4 6996 6556 6 1270 347 306 40 20 chrX 89893575 89893725 -76756571 + L2a LINE L2 3270 3422 -4 6 1270 238 337 39 29 chrX 89893766 89893870 -76756426 - MIRb SINE MIR -115 153 49 6 1270 295 366 122 0 chrX 89894133 89894297 -76755999 - ORR1E LTR MaLR -168 191 8 6 1270 798 153 118 39 chrX 89895558 89895762 -76754534 + Lx9 LINE L1 7424 7643 -1 6 1270 1099 75 0 13 chrX 89896118 89896267 -76754029 + B1_Mm SINE Alu 1 147 0 6 1270 26 0 0 0 chrX 89896722 89896748 -76753548 + AT_rich Low_complexity Low_complexity 1 26 0 6 1270 3460 129 122 5 chrX 89896781 89897420 -76752876 + L1_Mur1 LINE L1 1 714 -6268 6 1270 414 0 0 0 chrX 89897436 89897482 -76752814 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 1270 679 67 238 0 chrX 89897493 89897598 -76752698 - B1_Mus1 SINE Alu -12 136 7 6 1270 328 221 164 68 chrX 89897598 89897639 -76752657 - ID_B1 SINE B4 -12 212 53 6 1270 3933 85 35 6 chrX 89897640 89898646 -76751650 + L1_Mur1 LINE L1 750 1772 -4114 6 1270 4916 90 1 3 chrX 89898646 89899326 -76750970 + Lx3A LINE L1 6300 6978 -3 6 1270 252 178 122 14 chrX 89899448 89899522 -76750774 - Lx8 LINE L1 -5 7468 7387 6 1270 258 56 0 0 chrX 89899712 89899748 -76750548 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1270 587 239 44 7 chrX 89899897 89900032 -76750264 - B1F1 SINE Alu 0 149 10 6 1270 331 206 53 6 chrX 89900032 89900126 -76750170 - L1M2 LINE L1 -562 5621 5526 6 1270 411 21 0 0 chrX 89900127 89900175 -76750121 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 1270 777 230 45 22 chrX 89900184 89900543 -76749753 + L1M2 LINE L1 5123 5489 -823 6 1270 850 69 9 0 chrX 89901100 89901216 -76749080 - B1_Mus1 SINE Alu 0 148 32 6 1270 1408 28 6 0 chrX 89902244 89902424 -76747872 - L1Md_F2 LINE L1 0 6582 6402 6 1270 1812 56 0 0 chrX 89902424 89902657 -76747639 + L1_Mm LINE L1 3868 4100 -1783 6 1270 235 267 160 0 chrX 89902751 89902826 -76747470 + ID_B1 SINE B4 105 191 -33 6 1270 234 349 46 0 chrX 89902908 89903060 -76747236 + Lx7 LINE L1 5999 6157 -1539 6 1270 1524 261 63 14 chrX 89903034 89903462 -76746834 + Lx7 LINE L1 6855 7303 -393 6 1270 252 0 0 0 chrX 89903542 89903570 -76746726 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1270 183 80 0 0 chrX 89903610 89903635 -76746661 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1270 1236 255 131 32 chrX 89904752 89904912 -76745384 + MTD LTR MaLR 1 204 -215 6 1270 369 0 0 0 chrX 89904912 89904953 -76745343 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 6 1270 1236 255 131 32 chrX 89904953 89905165 -76745131 + MTD LTR MaLR 205 410 -9 6 1270 970 193 81 42 chrX 89905745 89906152 -76744144 - RMER17C LTR ERVK -520 438 33 6 1270 626 338 7 88 chrX 89906152 89906263 -76744033 + B4A SINE B4 1 102 -190 6 1270 261 0 0 0 chrX 89906263 89906292 -76744004 + (CCA)n Simple_repeat Simple_repeat 1 29 0 6 1270 626 338 7 88 chrX 89906292 89906485 -76743811 + B4A SINE B4 103 280 -12 6 1270 667 322 49 30 chrX 89906693 89906998 -76743298 + ORR1E LTR MaLR 52 372 -2 6 1270 2249 266 88 45 chrX 89907002 89907138 -76743158 + MTE-int LTR MaLR 51 183 -1397 6 1270 240 35 0 0 chrX 89907138 89907167 -76743129 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1270 2249 266 88 45 chrX 89907167 89907782 -76742514 + MTE-int LTR MaLR 184 834 -746 6 1270 866 298 5 10 chrX 89907845 89908052 -76742244 + ID_B1 SINE B4 4 209 -15 6 1270 330 26 0 0 chrX 89908061 89908100 -76742196 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1270 2259 111 78 18 chrX 89908151 89908316 -76741980 - RLTR9F LTR ERVK -4 411 231 6 1270 429 20 0 0 chrX 89908316 89908366 -76741930 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1270 2259 111 78 18 chrX 89908366 89908586 -76741710 - RLTR9F LTR ERVK -185 230 4 6 1270 779 241 35 24 chrX 89908826 89909014 -76741282 - B3 SINE B2 -12 183 8 6 1270 808 158 299 75 chrX 89909502 89909837 -76740459 + RMER17C LTR ERVK 1 410 0 6 1270 377 78 0 0 chrX 89909858 89909909 -76740387 - B1_Mur1 SINE Alu -8 141 91 6 1270 687 53 71 0 chrX 89910442 89910555 -76739741 + L1_Mus3 LINE L1 6511 6631 -7 6 1270 22 56 0 0 chrX 89910557 89910593 -76739703 + AT_rich Low_complexity Low_complexity 1 36 0 6 1270 218 352 43 11 chrX 89912246 89912338 -76737958 - MIRc SINE MIR -108 160 66 6 1270 477 255 99 0 chrX 89912365 89912506 -76737790 + RSINE1 SINE B4 2 156 -9 6 1270 274 22 43 43 chrX 89913010 89913057 -76737239 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 6 1270 945 122 0 0 chrX 89913325 89913481 -76736815 + (TTTC)n Simple_repeat Simple_repeat 2 157 0 6 1270 951 244 49 32 chrX 89913807 89914091 -76736205 + B4A SINE B4 3 291 -1 6 1270 414 0 0 0 chrX 89914520 89914566 -76735730 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1270 233 29 29 0 chrX 89914704 89914738 -76735558 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1270 1058 82 0 0 chrX 89914739 89914874 -76735422 - B1_Mm SINE Alu -12 135 1 6 1270 377 203 12 19 chrX 89914902 89915007 -76735289 - Lx7 LINE L1 -2 7694 7603 6 1270 276 53 0 0 chrX 89915041 89915079 -76735217 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 6 158 718 296 36 14 chrX 89915222 89915441 -76734855 + MER58A DNA MER1_type 1 224 0 6 1271 637 329 57 43 chrX 89916217 89916420 -76733876 + MLT1B LTR MaLR 34 242 -148 6 1271 3306 28 8 2 chrX 89916420 89916814 -76733482 - MTA_Mm LTR MaLR 0 396 1 6 1271 637 329 57 43 chrX 89916814 89916962 -76733334 + MLT1B LTR MaLR 243 390 0 6 1271 251 364 25 25 chrX 89917009 89917130 -76733166 + B4A SINE B4 13 133 -159 6 1271 3599 72 42 15 chrX 89917257 89917778 -76732518 - Lx3_Mus LINE L1 -13 6996 6462 6 1271 780 153 12 43 chrX 89917799 89917963 -76732333 + L1_Mur1 LINE L1 4551 4709 -1177 6 1271 445 299 167 15 chrX 89917948 89918152 -76732144 + Lx9 LINE L1 6546 6780 -864 6 1271 228 175 66 66 chrX 89918152 89918213 -76732083 - MLT2D LTR ERVL -234 180 120 7 1271 1056 263 9 85 chrX 89918214 89918542 -76731754 + Lx9 LINE L1 6853 7155 -489 6 1271 6171 47 7 46 chrX 89918543 89919384 -76730912 + L1_Mus1 LINE L1 5760 6567 0 7 1271 1578 209 28 3 chrX 89919548 89919869 -76730427 - Lx5 LINE L1 0 7050 6722 7 1271 4787 176 43 12 chrX 89919869 89920754 -76729542 + Lx5 LINE L1 5814 6725 -325 7 1271 1145 113 57 0 chrX 89920977 89921154 -76729142 - B2_Mm2 SINE B2 -7 188 2 7 1271 22 0 0 0 chrX 89921523 89921545 -76728751 + AT_rich Low_complexity Low_complexity 1 22 0 7 1271 203 291 23 102 chrX 89921584 89921672 -76728624 + MIRm SINE MIR 29 109 -167 7 1271 841 154 203 35 chrX 89922018 89922135 -76728161 + Lx9 LINE L1 7324 7476 -168 6 1271 616 83 0 20 chrX 89922135 89922233 -76728063 + (CATATA)n Simple_repeat Simple_repeat 1 96 0 7 1271 841 154 203 35 chrX 89922233 89922371 -76727925 + Lx9 LINE L1 7477 7621 -23 6 1271 621 108 43 51 chrX 89924485 89924602 -76725694 - B1_Mur4 SINE Alu 0 150 35 7 1271 358 353 76 45 chrX 89924704 89925097 -76725199 - MLT1H1 LTR MaLR -146 402 24 7 1271 772 250 116 59 chrX 89925113 89925532 -76724764 - RMER15 LTR ERVL -14 561 25 7 1271 37 39 0 0 chrX 89926155 89926206 -76724090 + AT_rich Low_complexity Low_complexity 1 51 0 7 1271 527 274 59 24 chrX 89926461 89926715 -76723581 + L1M2 LINE L1 4807 5069 -1074 7 1271 690 274 226 9 chrX 89926724 89927172 -76723124 + L1M3 LINE L1 3683 4227 -1913 7 1271 1087 289 29 11 chrX 89927477 89927757 -76722539 - B4A SINE B4 -3 289 5 7 1271 27 0 0 0 chrX 89927760 89927787 -76722509 + AT_rich Low_complexity Low_complexity 1 27 0 7 1271 11195 79 12 16 chrX 89927879 89929733 -76720563 - L1Md_F2 LINE L1 -12 6570 4717 7 1271 4740 2 0 0 chrX 89929733 89930257 -76720039 - L1Md_A LINE L1 0 6582 6059 7 1271 11195 77 3 24 chrX 89930257 89930623 -76719673 - L1Md_F2 LINE L1 -1167 4716 4358 7 1271 777 253 52 94 chrX 89930677 89930843 -76719453 + B3 SINE B2 1 164 -52 7 1271 311 105 18 0 chrX 89930843 89930900 -76719396 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 1271 473 253 52 94 chrX 89930900 89930925 -76719371 + B2_Mm2 SINE B2 159 184 -11 7 1271 2804 59 0 19 chrX 89933058 89933436 -76716860 - L1Md_F2 LINE L1 -3 6579 6209 7 1271 406 188 20 0 chrX 89933654 89933755 -76716541 + GA-rich Low_complexity Low_complexity 3 105 0 7 1271 249 286 79 0 chrX 89934815 89934878 -76715418 + 7SK RNA RNA 29 96 -235 7 1271 293 269 0 0 chrX 89936179 89936257 -76714039 - L1MA5 LINE L1 -23 6277 6200 7 1271 2064 206 3 0 chrX 89936502 89936866 -76713430 - Lx7 LINE L1 -929 6531 6167 7 1271 195 139 0 0 chrX 89936866 89936902 -76713394 + (CATA)n Simple_repeat Simple_repeat 4 39 0 7 1271 459 113 0 0 chrX 89936922 89936993 -76713303 + (TA)n Simple_repeat Simple_repeat 2 72 0 7 1271 5839 170 75 23 chrX 89937001 89938107 -76712189 - Lx7 LINE L1 -1510 6186 5043 7 1271 447 19 0 0 chrX 89938107 89938159 -76712137 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 1271 5839 158 83 30 chrX 89938159 89938573 -76711723 - Lx7 LINE L1 -838 5042 4582 7 1271 4863 159 52 71 chrX 89938575 89938903 -76711393 - Lx7 LINE L1 -3488 2392 2075 7 1271 495 48 0 0 chrX 89938903 89938965 -76711331 + (TAG)n Simple_repeat Simple_repeat 3 64 0 7 1271 4863 160 53 67 chrX 89938965 89940022 -76710274 - Lx7 LINE L1 -3806 2074 1013 7 1271 234 81 0 0 chrX 89940022 89940059 -76710237 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 7 1271 3463 165 54 50 chrX 89940059 89940492 -76709804 - Lx7 LINE L1 -6716 1012 581 7 1271 2262 123 29 91 chrX 89940493 89940942 -76709354 - RLTR23 LTR ERV1 0 430 10 7 1271 775 242 175 4 chrX 89940979 89941207 -76709089 - Lx7 LINE L1 -7399 329 63 7 1271 540 356 63 0 chrX 89941781 89941972 -76708324 + MER63A DNA AcHobo 1 203 -7 7 1271 481 211 163 0 chrX 89942490 89942613 -76707683 - B1_Mus2 SINE Alu -2 145 3 7 1271 595 300 60 42 chrX 89942696 89942997 -76707299 - MTE2b-int LTR MaLR -481 1099 716 7 1271 785 234 41 14 chrX 89943305 89943526 -76706770 - L1MB2 LINE L1 -87 6084 5858 7 1271 921 303 39 44 chrX 89943527 89943562 -76706734 - MTE2b-int LTR MaLR -786 794 759 7 1271 2567 79 23 0 chrX 89943562 89943916 -76706380 - L1_Mus3 LINE L1 -1 6637 6276 7 1271 1446 282 42 22 chrX 89943916 89944541 -76705755 - MTE2b-int LTR MaLR -822 758 2 7 1271 1390 251 82 6 chrX 89944547 89944888 -76705408 - MTE2b LTR MaLR -10 369 3 7 1271 204 255 0 0 chrX 89945623 89945670 -76704626 + (TA)n Simple_repeat Simple_repeat 1 47 0 7 1271 235 331 41 89 chrX 89946048 89946194 -76704102 + L2 LINE L2 1953 2091 -1328 7 1271 592 210 6 6 chrX 89946339 89946497 -76703799 + GA-rich Low_complexity Low_complexity 3 160 0 7 1271 756 313 135 16 chrX 89946617 89947241 -76703055 + L1_Mur3 LINE L1 1307 2004 -3876 7 1271 21 0 0 0 chrX 89947361 89947382 -76702914 + AT_rich Low_complexity Low_complexity 1 21 0 7 1271 733 294 32 74 chrX 89948225 89948508 -76701788 - Tigger5 DNA MER2_type 0 2406 2136 7 1271 24 32 0 0 chrX 89950081 89950112 -76700184 + AT_rich Low_complexity Low_complexity 1 31 0 7 1271 27 87 0 0 chrX 89950216 89950285 -76700011 + AT_rich Low_complexity Low_complexity 1 69 0 7 1271 333 0 0 0 chrX 89950349 89950386 -76699910 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1271 542 15 15 0 chrX 89950386 89950452 -76699844 + (TA)n Simple_repeat Simple_repeat 2 69 0 7 1271 2050 209 22 57 chrX 89950483 89950971 -76699325 - Lx7 LINE L1 -465 7231 6761 7 1271 4116 173 13 24 chrX 89951013 89952263 -76698033 - L1_Mur3 LINE L1 -4139 1741 510 7 1271 9936 46 1 0 chrX 89952262 89953490 -76696806 - L1_Mm LINE L1 -757 5126 3898 7 1271 3753 56 4 8 chrX 89953482 89953958 -76696338 + L1_Mm LINE L1 5113 5587 -296 7 1271 7865 49 13 0 chrX 89953958 89954941 -76695355 + L1Md_F3 LINE L1 5588 6583 -1 7 1271 1401 202 51 9 chrX 89954941 89955256 -76695040 - L1_Mur3 LINE L1 -7205 507 180 7 1271 1542 164 3 3 chrX 89956747 89957029 -76693267 + Lx2B LINE L1 6714 6995 -5 7 1271 632 217 0 0 chrX 89957332 89957447 -76692849 + B3 SINE B2 16 130 -86 7 1271 26 50 0 0 chrX 89957480 89957520 -76692776 + AT_rich Low_complexity Low_complexity 1 40 0 7 1271 35394 59 17 9 chrX 89957582 89962960 -76687336 + L1Md_T LINE L1 163 5586 -297 7 1271 8424 33 0 0 chrX 89962961 89963956 -76686340 + L1Md_T LINE L1 5588 6582 0 7 1271 2140 182 123 32 chrX 89963963 89964468 -76685828 + RMER4B LTR ERVK 35 585 0 7 1271 5119 202 63 17 chrX 89964478 89965532 -76684764 + Lx6 LINE L1 6357 7458 -2 7 1271 417 20 0 0 chrX 89965661 89965711 -76684585 + (GTTTG)n Simple_repeat Simple_repeat 4 53 0 7 1271 352 288 0 0 chrX 89965711 89965784 -76684512 - ID4 SINE ID -8 75 3 7 1271 27 29 0 0 chrX 89966556 89966590 -76683706 + AT_rich Low_complexity Low_complexity 1 34 0 7 1271 267 152 0 0 chrX 89967307 89967353 -76682943 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1271 185 262 57 91 chrX 89968046 89968134 -76682162 + MIR SINE MIR 57 141 -121 7 1271 3588 48 31 0 chrX 89968278 89968733 -76681563 - MT2C_Mm LTR ERVL 0 475 7 7 1271 284 0 0 27 chrX 89969009 89969046 -76681250 + (TA)n Simple_repeat Simple_repeat 2 37 0 7 1271 279 256 24 12 chrX 89969204 89969287 -76681009 + MER2B DNA MER2_type 179 262 -74 7 1271 5441 74 7 16 chrX 89969665 89970408 -76679888 - Lx3_Mus LINE L1 0 7009 6274 7 1271 6341 106 58 1 chrX 89970415 89971352 -76678944 - L1_Mus3 LINE L1 -1 6637 5648 7 1271 972 55 13 40 chrX 89971418 89971569 -76678727 - L1_Mus2 LINE L1 -1 6565 6419 7 1271 248 280 69 20 chrX 89971821 89971923 -76678373 + MIRb SINE MIR 112 218 -50 7 1271 2445 40 3 0 chrX 89972596 89972899 -76677397 - L1_Mus1 LINE L1 -1 6566 6263 7 1271 508 267 25 8 chrX 89973094 89973215 -76677081 - RSINE1 SINE B4 -29 136 14 7 1271 208 356 57 19 chrX 89973736 89973842 -76676454 + MIRb SINE MIR 91 200 -68 7 1271 3242 38 8 2 chrX 89974570 89974964 -76675332 - MTA_Mm LTR MaLR 0 396 1 7 1271 2353 317 72 38 chrX 89975092 89975216 -76675080 + Lx7 LINE L1 5613 5734 -1726 7 1271 6080 104 32 6 chrX 89975216 89976129 -76674167 + Lx2 LINE L1 6060 6996 -1 7 1271 2392 291 59 26 chrX 89976129 89977125 -76673171 + Lx7 LINE L1 5735 6782 -914 7 1271 398 243 76 40 chrX 89977142 89977365 -76672931 + L1MC3 LINE L1 7553 7783 -2 7 1271 297 75 0 0 chrX 89977445 89977485 -76672811 + (T)n Simple_repeat Simple_repeat 1 40 0 7 1271 1520 57 0 0 chrX 89977485 89977678 -76672618 + L1_Mus1 LINE L1 6375 6567 0 7 1271 473 286 79 8 chrX 89978477 89978604 -76671692 - B1_Mur2 SINE Alu -12 137 2 7 1271 590 99 0 11 chrX 89978802 89978894 -76671402 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 7 1271 1036 76 0 52 chrX 89978896 89979049 -76671247 - B1_Mm SINE Alu 0 147 3 7 1271 266 287 48 19 chrX 89979056 89979159 -76671137 - MIRc SINE MIR -50 218 113 7 1271 18279 111 56 11 chrX 89980881 89981197 -76669099 + Lx4A LINE L1 2709 3045 -2832 7 1271 204 40 0 0 chrX 89981197 89981222 -76669074 + (GAA)n Simple_repeat Simple_repeat 3 27 0 7 1271 18279 113 52 10 chrX 89981222 89984480 -76665816 + Lx4A LINE L1 3046 6441 -617 7 1271 2010 155 14 19 chrX 89984527 89984888 -76665408 + RLTR15 LTR ERVK 1 359 0 7 1271 626 247 40 11 chrX 89986704 89986932 -76663364 + L1MA4 LINE L1 5740 5966 -325 7 1271 255 170 0 0 chrX 89986960 89987007 -76663289 + (TA)n Simple_repeat Simple_repeat 2 48 0 7 1271 321 451 18 0 chrX 89987269 89987493 -76662803 + Tigger12c DNA MER2_type 1 228 -506 7 1271 1121 282 102 0 chrX 89987617 89987961 -76662335 - MTEa LTR MaLR 0 379 1 7 1271 397 298 8 46 chrX 89988287 89988417 -76661879 - MLT1A1 LTR MaLR -16 392 268 7 1271 1037 97 0 27 chrX 89988490 89988639 -76661657 + B1_Mm SINE Alu 3 147 0 7 1271 7316 58 37 2 chrX 89989249 89990312 -76659984 - L1_Mus2 LINE L1 0 6566 5468 7 1271 24 0 0 0 chrX 89990464 89990488 -76659808 + AT_rich Low_complexity Low_complexity 1 24 0 7 1271 223 352 45 8 chrX 89991465 89991580 -76658716 - L2c LINE L2 0 3375 3261 7 1271 842 330 57 68 chrX 89993304 89993524 -76656772 - MLT1C LTR MaLR 0 467 251 7 1271 1797 74 29 0 chrX 89993524 89993766 -76656530 - L1_Mus1 LINE L1 0 6567 6319 7 1271 842 330 57 68 chrX 89993766 89994017 -76656279 - MLT1C LTR MaLR -217 250 1 7 1271 816 274 94 3 chrX 89994129 89994675 -76655621 + Lx6 LINE L1 6218 6885 -575 7 1271 664 280 5 15 chrX 89994674 89994870 -76655426 + Lx6 LINE L1 7240 7433 -27 7 1271 1412 73 0 25 chrX 89994895 89995091 -76655205 + B2_Mm2 SINE B2 4 194 -1 7 1271 496 116 10 10 chrX 89995100 89995196 -76655100 + (GGGA)n Simple_repeat Simple_repeat 3 98 0 7 1271 198 0 0 0 chrX 89995309 89995331 -76654965 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 1271 15930 96 33 4 chrX 89995352 89998420 -76651876 + L1Md_F LINE L1 389 3548 -2335 7 1271 6346 51 48 1 chrX 89998417 89999357 -76650939 - L1Md_F2 LINE L1 -608 5974 4978 8 1271 5227 44 2 0 chrX 89999358 89999995 -76650301 + L1Md_F2 LINE L1 5944 6581 -1 8 1271 14583 71 14 0 chrX 90000000 90001965 -76648331 + L1Md_F2 LINE L1 3594 5585 -298 1 1271 7229 73 21 2 chrX 90001966 90002926 -76647370 + L1Md_F2 LINE L1 5587 6564 -18 1 1271 418 235 249 0 chrX 90003288 90003466 -76646830 + L1MD LINE L1 2585 2801 -3345 2 1271 1119 92 0 0 chrX 90003942 90004084 -76646212 + B1_Mus1 SINE Alu 1 142 -6 3 1271 206 0 0 65 chrX 90004086 90004117 -76646179 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1271 812 152 158 20 chrX 90004125 90004327 -76645969 + RMER1B Other Other 837 1066 0 5 1271 247 344 10 20 chrX 90004347 90004445 -76645851 + HAL1 LINE L1 580 676 -1831 6 1271 316 210 0 31 chrX 90004669 90004733 -76645563 + B3 SINE B2 64 125 -91 7 1271 206 118 0 0 chrX 90004742 90004776 -76645520 + (T)n Simple_repeat Simple_repeat 1 34 0 8 1271 432 0 0 0 chrX 90004844 90004892 -76645404 + (TA)n Simple_repeat Simple_repeat 2 49 0 9 1271 23 0 0 0 chrX 90004903 90004926 -76645370 + AT_rich Low_complexity Low_complexity 1 23 0 1 1271 344 271 127 14 chrX 90005000 90005142 -76645154 + HAL1 LINE L1 1384 1541 -966 6 1271 469 278 188 17 chrX 90005207 90005441 -76644855 - Lx8 LINE L1 -8 7465 7192 1 1271 450 289 186 23 chrX 90005566 90005910 -76644386 + HAL1 LINE L1 1723 2122 -385 6 1271 474 237 143 7 chrX 90005918 90006058 -76644238 + MER5B DNA MER1_type 4 162 -16 1 1271 339 314 161 70 chrX 90006081 90006361 -76643935 + HAL1 LINE L1 2148 2469 -38 6 1271 1185 36 0 0 chrX 90006361 90006499 -76643797 + B1_Mm SINE Alu 2 139 -8 1 1271 915 130 0 0 chrX 90006499 90006645 -76643651 + (GA)n Simple_repeat Simple_repeat 2 147 0 1 1271 339 314 161 70 chrX 90006645 90006692 -76643604 + HAL1 LINE L1 2470 2505 -2 6 1271 318 152 0 0 chrX 90006802 90006861 -76643435 + (CATA)n Simple_repeat Simple_repeat 2 60 0 1 1271 424 115 0 0 chrX 90007167 90007228 -76643068 - Lx7 LINE L1 -356 7340 7280 1 1271 962 204 75 51 chrX 90007260 90007591 -76642705 + Lx7 LINE L1 7357 7695 -1 1 1271 273 273 0 0 chrX 90007617 90007725 -76642571 + L1M5 LINE L1 5698 5800 -2082 1 1271 738 324 32 5 chrX 90007911 90008131 -76642165 + B4A SINE B4 2 227 -65 1 1271 990 225 98 19 chrX 90008131 90008545 -76641751 + Lx9 LINE L1 5631 6101 -1543 2 1271 2460 95 0 0 chrX 90008584 90008911 -76641385 - ORR1A2 LTR MaLR 0 327 1 2 1271 883 232 14 23 chrX 90009047 90009263 -76641033 - B3 SINE B2 0 216 3 2 1271 1539 263 191 40 chrX 90009647 90010324 -76639972 + Lx9 LINE L1 6833 7611 -33 2 1271 22 70 0 0 chrX 90010539 90010582 -76639714 + AT_rich Low_complexity Low_complexity 1 43 0 2 1271 16460 16 0 0 chrX 90010724 90013348 -76636948 - L1Md_T LINE L1 -1 6581 3958 2 1271 21 0 0 0 chrX 90013522 90013543 -76636753 + AT_rich Low_complexity Low_complexity 1 21 0 2 1271 2123 122 3 58 chrX 90014570 90014918 -76635378 + ORR1A4 LTR MaLR 1 329 0 2 1271 1471 265 48 91 chrX 90015355 90015944 -76634352 + RMER1B Other Other 1 492 -574 2 1271 4435 182 162 13 chrX 90015964 90017032 -76633264 + RMER1A Other Other 2 1021 -9 2 1271 835 203 16 52 chrX 90017032 90017224 -76633072 + B3 SINE B2 27 211 -5 3 1271 569 295 68 43 chrX 90017936 90018170 -76632126 - MIR SINE MIR 0 262 23 3 1271 21 36 0 0 chrX 90019246 90019274 -76631022 + AT_rich Low_complexity Low_complexity 1 28 0 3 1271 509 266 8 61 chrX 90020564 90020696 -76629600 + RSINE1 SINE B4 3 127 -38 3 1271 351 0 0 0 chrX 90020696 90020735 -76629561 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1271 5202 119 6 21 chrX 90021699 90023240 -76627056 - L1Md_A LINE L1 -3939 1944 446 3 1271 25 0 0 0 chrX 90023244 90023269 -76627027 + AT_rich Low_complexity Low_complexity 1 25 0 3 1271 23 33 0 0 chrX 90023562 90023592 -76626704 + AT_rich Low_complexity Low_complexity 1 30 0 3 1271 381 284 141 7 chrX 90025443 90025585 -76624711 + RSINE1 SINE B4 2 162 -3 3 1271 2495 56 62 6 chrX 90025676 90026001 -76624295 - ORR1A1 LTR MaLR -3 343 1 3 1271 21 57 0 0 chrX 90026115 90026150 -76624146 + AT_rich Low_complexity Low_complexity 1 35 0 4 1271 23 92 0 0 chrX 90026437 90026502 -76623794 + AT_rich Low_complexity Low_complexity 1 65 0 4 1271 232 335 84 63 chrX 90026625 90026864 -76623432 - MIR SINE MIR -17 245 2 4 1271 1224 47 0 0 chrX 90027817 90027965 -76622331 + B1_Mus1 SINE Alu 1 148 0 4 1271 3124 302 64 19 chrX 90028005 90029121 -76621175 + Lx8 LINE L1 6164 7329 -144 4 1271 22 35 0 0 chrX 90029222 90029251 -76621045 + AT_rich Low_complexity Low_complexity 1 29 0 4 1271 300 299 69 115 chrX 90029261 90029421 -76620875 + B4 SINE B4 5 151 -73 4 1271 556 301 139 31 chrX 90029576 90029754 -76620542 - L1MD3 LINE L1 -120 7875 7665 4 1271 567 0 0 0 chrX 90029754 90029817 -76620479 + (TTTTG)n Simple_repeat Simple_repeat 3 65 0 4 1271 556 301 139 31 chrX 90029817 90030090 -76620206 - L1MD3 LINE L1 -331 7664 7375 4 1271 391 259 62 62 chrX 90030103 90030313 -76619983 - Lx7 LINE L1 0 7696 7487 4 1271 1009 173 147 0 chrX 90030730 90030927 -76619369 - URR1A DNA MER1_type 0 226 1 5 1271 845 274 86 22 chrX 90031066 90031390 -76618906 + L1MC1 LINE L1 5985 6323 -10 5 1271 319 262 26 20 chrX 90033118 90033270 -76617026 + (TA)n Simple_repeat Simple_repeat 1 153 0 5 1271 232 174 0 0 chrX 90033890 90033936 -76616360 + A-rich Low_complexity Low_complexity 1 46 0 5 1271 1048 247 57 0 chrX 90034681 90034928 -76615368 + Lx6 LINE L1 7198 7458 -2 5 1271 21 0 0 0 chrX 90036649 90036670 -76613626 + AT_rich Low_complexity Low_complexity 1 21 0 5 1271 387 0 0 0 chrX 90036747 90036790 -76613506 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1271 969 243 29 0 chrX 90037192 90037402 -76612894 - B3 SINE B2 0 216 1 5 1271 25 0 0 0 chrX 90037825 90037850 -76612446 + AT_rich Low_complexity Low_complexity 1 25 0 5 1271 5263 202 36 19 chrX 90037850 90038966 -76611330 - Lx5 LINE L1 0 7050 5916 5 1271 4386 76 34 43 chrX 90039609 90040257 -76610039 + L1_Mus2 LINE L1 5922 6563 -3 6 1271 239 231 0 0 chrX 90040581 90040633 -76609663 - Lx8 LINE L1 -1553 5920 5869 6 1271 446 0 0 18 chrX 90041362 90041417 -76608879 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 6 1271 1064 82 0 0 chrX 90041418 90041552 -76608744 - B1_Mm SINE Alu -12 135 2 6 1271 661 344 48 27 chrX 90042392 90042685 -76607611 - LTR40a LTR ERVL 0 519 221 6 1271 228 67 0 0 chrX 90043013 90043043 -76607253 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1271 298 263 33 33 chrX 90043867 90043989 -76606307 - HAL1b LINE L1 -77 1932 1811 6 1271 597 196 255 0 chrX 90044183 90044336 -76605960 - URR1A DNA MER1_type 0 226 35 6 1271 211 375 39 0 chrX 90044456 90044560 -76605736 - PB1D9 SINE Alu -1 119 12 6 1271 378 353 232 3 chrX 90045023 90045593 -76604703 - L2a LINE L2 0 3426 2723 6 158 35328 36 0 0 chrX 90045976 90051605 -76598691 + L1Md_T LINE L1 1 5589 -297 7 1272 8979 6 0 0 chrX 90051605 90052601 -76597695 + L1Md_T LINE L1 5590 6585 0 7 1272 3982 63 26 16 chrX 90053629 90054356 -76595940 - L1_Mus3 LINE L1 -568 6070 5332 7 1272 3284 191 37 27 chrX 90054387 90055063 -76595233 - Lx5 LINE L1 -497 6553 5871 7 1272 836 172 104 43 chrX 90055928 90056159 -76594137 - RMER21B LTR ERV1 -304 538 294 7 1272 568 178 28 18 chrX 90057537 90057646 -76592650 + PB1D9 SINE Alu 1 110 -10 7 1272 558 258 92 155 chrX 90057720 90057902 -76592394 - B4 SINE B4 -8 284 86 7 1272 189 0 0 0 chrX 90057902 90057923 -76592373 + (CCCCCA)n Simple_repeat Simple_repeat 5 25 0 7 1272 558 258 92 155 chrX 90057923 90058043 -76592253 - B4 SINE B4 -207 85 1 7 1272 181 0 33 33 chrX 90058448 90058478 -76591818 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 7 1272 2028 187 143 0 chrX 90058985 90059419 -76590877 + RLTR1 LTR ERV1 129 624 0 7 1272 447 281 278 25 chrX 90059451 90059928 -76590368 - L1M3 LINE L1 -940 5200 4603 7 1272 26 30 0 0 chrX 90059952 90059985 -76590311 + AT_rich Low_complexity Low_complexity 1 33 0 8 1272 546 114 0 0 chrX 90059985 90060073 -76590223 + (TG)n Simple_repeat Simple_repeat 2 89 0 8 1272 235 296 0 36 chrX 90060079 90060135 -76590161 - RSINE1 SINE B4 -19 146 93 8 1272 358 208 78 0 chrX 90060124 90060201 -76590095 - RMER19B LTR ERVK -819 83 1 8 1272 6737 54 0 5 chrX 90060392 90061236 -76589060 + L1Md_F2 LINE L1 5732 6571 -11 8 1272 225 0 0 0 chrX 90061518 90061543 -76588753 + (TTA)n Simple_repeat Simple_repeat 1 25 0 8 1272 1388 236 54 15 chrX 90061543 90061874 -76588422 - Lx2B LINE L1 -13 6987 6644 8 1272 1646 150 107 7 chrX 90061874 90062182 -76588114 + RMER19B LTR ERVK 535 873 -29 8 1272 952 29 11 0 chrX 90062258 90062393 -76587903 - B1_Mus1 SINE Alu 0 149 11 8 1272 241 282 0 0 chrX 90062437 90062508 -76587788 - L1MB1 LINE L1 -50 6139 6069 8 1272 259 217 67 0 chrX 90062540 90062600 -76587696 + RMER5 LTR ERV1 33 96 -438 9 1272 2947 41 0 64 chrX 90062600 90062990 -76587306 + RLTR10B2 LTR ERVK 1 365 0 9 1272 3672 157 116 26 chrX 90063000 90063874 -76586422 + RLTR10-int LTR ERVK 41 992 -995 9 1272 510 298 34 30 chrX 90064014 90064294 -76586002 + IAP-d-int LTR ERVK 822 1060 -5482 9 1272 1464 124 121 0 chrX 90064293 90064542 -76585754 + IAP-d-int LTR ERVK 4977 5255 -1287 9 1272 4098 118 17 0 chrX 90064542 90065214 -76585082 + IAPEY3-int LTR ERVK 6965 7680 0 9 1272 2865 33 0 118 chrX 90065214 90065628 -76584668 + RLTR10B2 LTR ERVK 1 365 0 9 1272 610 331 49 21 chrX 90065723 90066010 -76584286 + RMER5 LTR ERV1 240 534 0 9 1272 315 313 89 31 chrX 90066035 90066259 -76584037 - L1MCa LINE L1 -4876 1632 1396 9 1272 234 91 0 0 chrX 90066540 90066573 -76583723 + (CA)n Simple_repeat Simple_repeat 2 34 0 9 1272 514 146 214 0 chrX 90066573 90066676 -76583620 - Lx6 LINE L1 -688 6772 6648 9 1272 1638 162 98 6 chrX 90066848 90067165 -76583131 + ORR1B1 LTR MaLR 41 386 -8 9 1272 913 127 30 0 chrX 90067389 90067523 -76582773 + B1_Mus1 SINE Alu 1 138 -10 9 1272 197 132 0 26 chrX 90067530 90067543 -76582753 + polypurine Low_complexity Low_complexity 4 16 0 1 1272 1034 144 0 6 chrX 90067543 90067724 -76582572 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 1272 197 132 0 26 chrX 90067724 90067749 -76582547 + polypurine Low_complexity Low_complexity 17 41 0 1 1272 848 133 0 6 chrX 90067776 90067957 -76582339 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 1272 504 0 0 0 chrX 90068063 90068119 -76582177 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 1272 1450 189 49 0 chrX 90068391 90068676 -76581620 - L1_Mur3 LINE L1 -57 5823 5525 1 1272 200 233 0 0 chrX 90069123 90069166 -76581130 + T-rich Low_complexity Low_complexity 1 43 0 1 1272 480 319 7 27 chrX 90069439 90069594 -76580702 + B4A SINE B4 1 147 -77 1 1272 277 265 60 12 chrX 90069606 90069690 -76580606 + RSINE1 SINE B4 78 165 0 1 1272 29 28 0 0 chrX 90069698 90069734 -76580562 + AT_rich Low_complexity Low_complexity 1 36 0 1 1272 2368 186 30 36 chrX 90069752 90070220 -76580076 + RLTR12B LTR ERVK 1 465 -63 1 1272 1672 191 9 6 chrX 90070220 90070471 -76579825 + Lx2B LINE L1 6530 6779 -221 1 1272 423 0 0 0 chrX 90070471 90070518 -76579778 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1272 378 0 0 0 chrX 90070518 90070559 -76579737 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1272 1672 226 11 27 chrX 90070559 90070692 -76579604 + Lx2B LINE L1 6780 6904 -69 1 1272 26 30 0 0 chrX 90070698 90070731 -76579565 + AT_rich Low_complexity Low_complexity 1 33 0 1 1272 313 211 125 14 chrX 90070731 90070803 -76579493 + RLTR12B LTR ERVK 445 524 -4 1 1272 246 284 141 7 chrX 90070881 90071030 -76579266 + L1MA5 LINE L1 5468 5636 -655 1 1272 432 0 0 0 chrX 90071031 90071079 -76579217 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1272 423 0 0 0 chrX 90071452 90071499 -76578797 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1272 1260 246 148 32 chrX 90071517 90072071 -76578225 + L1MA5 LINE L1 5682 6299 -1 1 1272 870 216 0 49 chrX 90072078 90072282 -76578014 + L1_Mur3 LINE L1 49 242 -7470 1 1272 263 88 0 0 chrX 90072278 90072312 -76577984 - L1_Mus3 LINE L1 -463 6175 6142 1 1272 2465 76 0 0 chrX 90072313 90072654 -76577642 - L1_Mm LINE L1 -3799 2084 1744 1 1272 1373 202 69 10 chrX 90072651 90072941 -76577355 + Lx7 LINE L1 6631 6937 -759 1 1272 1917 97 40 43 chrX 90072984 90073309 -76576987 + ORR1A3 LTR MaLR 1 324 -2 1 1272 207 69 0 0 chrX 90075110 90075139 -76575157 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1272 193 231 36 55 chrX 90075139 90075194 -76575102 - L3 LINE CR1 -3516 973 920 1 1272 1079 262 112 127 chrX 90075898 90076813 -76573483 + L1MC1 LINE L1 4182 5079 -1067 1 1272 3511 144 15 20 chrX 90076813 90077401 -76572895 - RMER4B LTR ERVK 0 585 1 1 1272 1079 262 112 127 chrX 90077401 90077534 -76572762 + L1MC1 LINE L1 5080 5214 -932 1 1272 1061 128 0 11 chrX 90077534 90077715 -76572581 + (GAA)n Simple_repeat Simple_repeat 1 179 0 1 1272 787 313 106 0 chrX 90077752 90078017 -76572279 + MTEa LTR MaLR 87 379 0 1 1272 798 271 116 117 chrX 90078064 90078097 -76572199 + L1MC1 LINE L1 5258 5289 -1055 1 1272 2713 159 54 4 chrX 90078097 90078578 -76571718 + RLTR16 LTR ERVK 1 505 0 1 1272 854 271 116 117 chrX 90078578 90079392 -76570904 + L1MC1 LINE L1 5290 6104 -240 1 1272 503 268 14 55 chrX 90079403 90079549 -76570747 + B1F1 SINE Alu 10 149 0 1 1272 570 146 0 0 chrX 90079549 90079645 -76570651 + (A)n Simple_repeat Simple_repeat 1 96 0 1 1272 404 287 116 5 chrX 90079646 90079835 -76570461 + L1MC1 LINE L1 6118 6327 -17 1 1272 497 142 283 0 chrX 90079946 90080059 -76570237 + URR1B DNA MER1_type 1 145 -80 1 1272 330 246 0 0 chrX 90080172 90080233 -76570063 + URR1B DNA MER1_type 165 225 0 1 1272 366 23 0 0 chrX 90080307 90080350 -76569946 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1272 225 0 0 0 chrX 90080350 90080374 -76569922 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1272 247 331 69 53 chrX 90080631 90080762 -76569534 - ORR1E LTR MaLR -218 141 9 1 1272 263 308 84 28 chrX 90081270 90081377 -76568919 + L3 LINE CR1 3990 4102 -387 1 1272 2995 140 85 29 chrX 90081492 90082045 -76568251 + RMER4B LTR ERVK 1 584 -1 1 1272 183 80 0 0 chrX 90082150 90082175 -76568121 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 1272 22 35 0 0 chrX 90082580 90082609 -76567687 + AT_rich Low_complexity Low_complexity 1 29 0 1 1272 1092 222 0 0 chrX 90082626 90082829 -76567467 - B3 SINE B2 -13 203 1 1 1272 647 296 52 28 chrX 90083110 90083398 -76566898 + CR1_Mam LINE CR1 1338 1632 -572 1 1272 291 282 73 0 chrX 90084032 90084156 -76566140 + L1M5 LINE L1 5693 5825 -415 1 1272 1411 259 18 3 chrX 90084549 90084886 -76565410 + Lx8 LINE L1 6887 7228 -245 1 1272 450 53 0 0 chrX 90084888 90084945 -76565351 + (TCC)n Simple_repeat Simple_repeat 1 57 0 1 1272 277 296 0 40 chrX 90084957 90085031 -76565265 + Lx8 LINE L1 7233 7303 -170 1 1272 1726 207 121 3 chrX 90085080 90085453 -76564843 + MTD LTR MaLR 3 419 0 1 1272 390 21 0 0 chrX 90085482 90085529 -76564767 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1272 4133 137 67 10 chrX 90085579 90086299 -76563997 + Lx2B LINE L1 6239 6999 -1 1 1272 4371 128 85 3 chrX 90086349 90087030 -76563266 + RMER19A LTR ERVK 1 737 0 1 1272 228 192 0 71 chrX 90087556 90087612 -76562684 - PB1D7 SINE Alu 0 120 69 1 1272 4116 84 9 2 chrX 90087672 90088235 -76562061 + L1_Mus3 LINE L1 6070 6636 -2 1 1272 186 71 0 0 chrX 90088441 90088469 -76561827 + (CAGA)n Simple_repeat Simple_repeat 4 31 0 1 1272 24 0 0 0 chrX 90089434 90089458 -76560838 + AT_rich Low_complexity Low_complexity 1 24 0 1 1272 920 246 14 10 chrX 90089861 90090070 -76560226 + B3 SINE B2 3 212 -4 1 1272 313 272 76 18 chrX 90090091 90090246 -76560050 + MER34 LTR ERV1 373 571 0 1 1272 22 0 0 0 chrX 90090980 90091002 -76559294 + AT_rich Low_complexity Low_complexity 1 22 0 1 1272 439 141 0 0 chrX 90091872 90091936 -76558360 + B1_Mus2 SINE Alu 1 64 -83 1 1272 8256 44 0 0 chrX 90091939 90093126 -76557170 - L1Md_F3 LINE L1 -14 6570 5384 1 1272 743 62 0 0 chrX 90093126 90093223 -76557073 + B1_Mus2 SINE Alu 51 147 0 1 1272 31586 91 11 18 chrX 90093230 90096553 -76553743 + L1Md_F2 LINE L1 415 3725 -2158 1 1272 1621 22 0 0 chrX 90096553 90096737 -76553559 + B2_Mm1a SINE B2 4 187 -6 1 1272 31586 78 4 10 chrX 90096737 90098618 -76551678 + L1Md_F2 LINE L1 3726 5584 -299 1 1272 7666 65 2 4 chrX 90098620 90099618 -76550678 + L1Md_F2 LINE L1 5587 6582 0 1 1272 352 289 47 0 chrX 90099999 90100150 -76550146 + L1_Rod LINE L1 2328 2490 -3653 1 1272 33 25 0 0 chrX 90101275 90101315 -76548981 + AT_rich Low_complexity Low_complexity 1 40 0 1 1272 337 338 49 31 chrX 90101857 90102019 -76548277 - MIRb SINE MIR -1 267 103 1 1272 1183 203 19 0 chrX 90102228 90102440 -76547856 + B3 SINE B2 1 216 0 1 1272 1604 300 88 28 chrX 90102475 90103356 -76546940 + Lx8 LINE L1 6538 7471 -2 1 1272 325 163 117 33 chrX 90103388 90103492 -76546804 + Tigger7 DNA MER2_type 2277 2393 -98 1 1272 30 0 0 0 chrX 90103547 90103577 -76546719 + AT_rich Low_complexity Low_complexity 1 30 0 1 1272 688 202 0 8 chrX 90104480 90104600 -76545696 - PB1D9 SINE Alu -1 119 1 1 1272 615 306 6 0 chrX 90104693 90104853 -76545443 + RSINE1 SINE B4 3 163 -2 1 1272 496 319 55 0 chrX 90104864 90105027 -76545269 + Lx6 LINE L1 6617 6788 -672 1 1272 571 336 30 29 chrX 90105256 90105980 -76544316 - L1M2 LINE L1 -3945 2904 2248 1 1272 504 141 0 0 chrX 90106043 90106121 -76544175 + Lx9 LINE L1 7330 7407 -237 1 1272 1505 202 25 34 chrX 90106111 90106478 -76543818 + Lx7 LINE L1 6024 6388 -1308 1 1272 2653 222 81 4 chrX 90106478 90107033 -76543263 + Lx6 LINE L1 6543 7140 -320 1 1272 1471 152 12 4 chrX 90107452 90107518 -76542778 + Lx2 LINE L1 4909 4974 -903 1 1272 222 37 0 0 chrX 90107518 90107545 -76542751 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1 1272 1471 152 12 4 chrX 90107545 90107735 -76542561 + Lx2 LINE L1 4975 5166 -711 1 1272 9153 115 34 12 chrX 90107735 90109190 -76541106 + Lx2 LINE L1 5504 6994 -3 1 1272 288 330 36 0 chrX 90109223 90109335 -76540961 - RLTR25B LTR ERVK -912 116 1 1 1272 552 154 38 23 chrX 90109335 90109468 -76540828 + Lx7 LINE L1 7397 7531 -165 1 1272 680 312 66 26 chrX 90109615 90109842 -76540454 + B4A SINE B4 1 236 -56 1 1272 747 256 6 11 chrX 90110102 90110259 -76540037 + ID_B1 SINE B4 85 238 -54 1 1272 241 359 65 19 chrX 90110233 90110341 -76539955 + B4A SINE B4 82 194 -98 1 1272 220 267 25 62 chrX 90110298 90110378 -76539918 + PB1D9 SINE Alu 39 115 -5 1 1272 1022 101 55 16 chrX 90110545 90110727 -76539569 - L1Md_F2 LINE L1 0 6582 6394 1 1272 254 224 118 39 chrX 90111167 90111269 -76539027 + MIRc SINE MIR 124 233 -35 1 1272 723 297 75 64 chrX 90111349 90111615 -76538681 - B4 SINE B4 -12 280 12 1 1272 247 413 64 0 chrX 90112912 90113021 -76537275 + MIRb SINE MIR 14 129 -139 1 1272 3940 172 138 68 chrX 90113024 90113984 -76536312 + RLTR25B LTR ERVK 1 1028 0 1 1272 313 80 53 13 chrX 90114095 90114171 -76536125 + (TA)n Simple_repeat Simple_repeat 1 79 0 1 1272 231 286 32 0 chrX 90117039 90117102 -76533194 + MLT1J1 LTR MaLR 114 178 -334 1 1272 216 0 0 0 chrX 90117112 90117136 -76533160 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1272 5321 5 0 0 chrX 90117154 90117742 -76532554 - L1Md_A LINE L1 0 6582 5995 1 1272 5031 29 0 0 chrX 90117760 90118348 -76531948 - L1Md_T LINE L1 0 6582 5995 1 1272 283 228 0 34 chrX 90118461 90118520 -76531776 + MLT1J1 LTR MaLR 249 305 -139 1 1272 478 266 143 158 chrX 90118567 90118643 -76531653 - MTE2b LTR MaLR -105 274 166 1 1272 542 15 15 0 chrX 90118643 90118710 -76531586 + (TTTTG)n Simple_repeat Simple_repeat 3 70 0 1 1272 478 266 143 158 chrX 90118710 90118905 -76531391 - MTE2b LTR MaLR -214 165 8 1 1272 2675 191 48 1 chrX 90119202 90119960 -76530336 + Lx3_Mus LINE L1 6091 7379 -94 1 1272 2618 118 20 0 chrX 90120400 90120785 -76529511 + Lx3_Mus LINE L1 6577 6969 -12 1 1272 213 39 0 0 chrX 90120785 90120811 -76529485 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1 1272 2618 118 20 0 chrX 90120811 90120822 -76529474 + Lx3_Mus LINE L1 6970 6980 -1 1 1272 298 241 9 27 chrX 90120822 90120933 -76529363 + Lx8 LINE L1 7357 7465 -8 1 1272 327 296 12 12 chrX 90121311 90121393 -76528903 + MLT1H2 LTR MaLR 72 153 -396 1 1272 410 283 10 20 chrX 90121364 90121465 -76528831 + MLT1H2 LTR MaLR 88 187 -302 1 1272 353 264 136 20 chrX 90121494 90121641 -76528655 + RSINE1 SINE B4 2 165 0 1 1272 381 43 0 0 chrX 90121968 90122015 -76528281 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1272 351 0 0 0 chrX 90122044 90122083 -76528213 + (TAA)n Simple_repeat Simple_repeat 2 40 0 2 1272 424 215 131 0 chrX 90122771 90122878 -76527418 - MLT1H2 LTR MaLR -3 486 366 2 1272 208 143 0 0 chrX 90123731 90123766 -76526530 + (T)n Simple_repeat Simple_repeat 1 35 0 2 1272 1004 134 137 15 chrX 90123772 90123976 -76526320 - Lx5 LINE L1 -3 7047 6819 2 1272 488 284 36 23 chrX 90124125 90124276 -76526020 - PB1D10 SINE Alu 0 149 6 2 1272 268 305 10 87 chrX 90124183 90124287 -76526009 - MT2B2 LTR ERVL -330 254 159 2 1272 1808 195 65 31 chrX 90124317 90124703 -76525593 + MTB_Mm LTR MaLR 1 399 -8 2 1272 492 290 113 39 chrX 90124718 90124948 -76525348 - MIR SINE MIR 0 262 16 2 1272 660 239 14 0 chrX 90125336 90125478 -76524818 + B1_Mur2 SINE Alu 5 148 -1 2 1272 471 291 96 24 chrX 90126955 90127247 -76523049 + L1ME1 LINE L1 5544 5856 -323 2 1272 908 144 204 0 chrX 90127265 90127446 -76522850 + URR1B DNA MER1_type 8 225 0 2 1272 374 328 22 34 chrX 90127476 90127744 -76522552 + L1ME1 LINE L1 5895 6159 -20 2 1272 552 178 29 10 chrX 90127790 90127892 -76522404 + U6 snRNA snRNA 2 105 -2 2 1272 237 345 120 13 chrX 90128402 90128552 -76521744 - LTR33A_ LTR ERVL -123 408 243 2 1272 540 45 0 0 chrX 90129292 90129359 -76520937 + (TA)n Simple_repeat Simple_repeat 1 67 0 2 1272 3808 199 43 35 chrX 90129735 90131329 -76518967 - Lx2 LINE L1 0 6997 5388 2 1272 5836 167 4 71 chrX 90131322 90132609 -76517687 + Lx2 LINE L1 4200 5400 -486 2 1272 194 62 31 0 chrX 90133142 90133174 -76517122 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1272 654 254 45 49 chrX 90133182 90133499 -76516797 - MT2A LTR ERVL -74 459 100 2 1272 1976 143 44 0 chrX 90133500 90133864 -76516432 - Lx2 LINE L1 -686 6311 5932 2 1272 1612 111 0 0 chrX 90133865 90134100 -76516196 + Lx2 LINE L1 6407 6641 -356 2 1272 1544 99 0 13 chrX 90134102 90134328 -76515968 + Lx2 LINE L1 6775 6997 0 2 1272 984 185 20 25 chrX 90134342 90134542 -76515754 - MT2A LTR ERVL -334 199 1 2 1272 2238 271 64 70 chrX 90134598 90135420 -76514876 - Lx8 LINE L1 -228 7245 6432 2 1272 1145 69 0 7 chrX 90135420 90135566 -76514730 - B1_Mus2 SINE Alu 0 147 3 2 1272 2238 271 64 70 chrX 90135566 90135633 -76514663 - Lx8 LINE L1 -1042 6431 6362 2 1272 6010 99 40 5 chrX 90135920 90136140 -76514156 - L1_Mus3 LINE L1 0 6636 6354 2 1272 3920 49 2 119 chrX 90136140 90136720 -76513576 + RLTR1B LTR ERV1 1 512 0 2 1272 6010 78 4 5 chrX 90136720 90137454 -76512842 - L1_Mus3 LINE L1 -285 6353 5618 2 1272 1384 53 0 0 chrX 90137454 90137625 -76512671 - B2_Mm1a SINE B2 -21 172 2 2 1272 3574 82 15 0 chrX 90137626 90138147 -76512149 - L1_Mus3 LINE L1 -423 5460 4932 2 1272 378 287 93 89 chrX 90138256 90138547 -76511749 + B4A SINE B4 1 292 0 2 1272 637 272 85 19 chrX 90138658 90138928 -76511368 + Lx7 LINE L1 5613 5900 -1796 2 1272 724 254 0 0 chrX 90139064 90139206 -76511090 + B1_Mur4 SINE Alu 1 142 -8 2 1272 6975 92 7 9 chrX 90139207 90140669 -76509627 + L1_Mus2 LINE L1 5111 6565 -1 2 1272 21 0 0 0 chrX 90142526 90142547 -76507749 + AT_rich Low_complexity Low_complexity 1 21 0 2 1272 1167 75 0 0 chrX 90142776 90142923 -76507373 + B1_Mm SINE Alu 1 147 0 2 1272 25 31 0 0 chrX 90143117 90143149 -76507147 + AT_rich Low_complexity Low_complexity 1 32 0 2 1272 323 167 15 0 chrX 90143208 90143274 -76507022 + GA-rich Low_complexity Low_complexity 2 68 0 2 1272 345 327 0 76 chrX 90143345 90143464 -76506832 - PB1D10 SINE Alu -1 116 7 2 1272 226 402 33 0 chrX 90143383 90143475 -76506821 - B4A SINE B4 -117 175 81 2 1272 375 311 130 19 chrX 90143659 90143813 -76506483 + MLT1I LTR MaLR 1 171 -240 2 1272 1061 88 14 0 chrX 90143838 90143986 -76506310 + B2_Mm1t SINE B2 2 151 -42 2 1272 483 93 324 27 chrX 90144015 90144126 -76506170 + B2_Mm2 SINE B2 47 190 -5 2 1272 990 40 0 23 chrX 90144162 90144291 -76506005 + B1_Mus1 SINE Alu 23 148 0 2 1272 465 150 0 0 chrX 90144291 90144391 -76505905 + (A)n Simple_repeat Simple_repeat 1 100 0 2 1272 221 214 0 0 chrX 90144871 90144913 -76505383 + B1_Mus2 SINE Alu 93 134 -13 2 1272 195 42 0 0 chrX 90144913 90144937 -76505359 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 2 1272 240 345 128 0 chrX 90145379 90145527 -76504769 + MIRc SINE MIR 10 176 -92 2 1272 210 239 0 0 chrX 90146229 90146275 -76504021 + GA-rich Low_complexity Low_complexity 2 47 0 2 1272 411 21 0 0 chrX 90146276 90146324 -76503972 + (TGGA)n Simple_repeat Simple_repeat 1 48 0 2 1272 434 321 52 70 chrX 90146403 90146544 -76503752 + L1M2 LINE L1 4863 5004 -1139 2 1272 346 324 32 69 chrX 90146544 90146733 -76503563 + B3A SINE B2 1 182 -16 2 1272 434 322 54 63 chrX 90146733 90147131 -76503165 + L1M2 LINE L1 4986 5393 -747 2 1272 29211 116 13 16 chrX 90147321 90153614 -76496682 + L1_Mus2 LINE L1 258 6566 0 2 1272 201 74 0 0 chrX 90153620 90153647 -76496649 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1272 681 309 62 21 chrX 90153805 90153997 -76496299 + 7SLRNA srpRNA srpRNA 17 216 -98 2 1272 446 269 92 30 chrX 90154003 90154340 -76495956 + L1M2 LINE L1 3156 3513 -2630 2 1272 36854 6 0 0 chrX 90154345 90159909 -76490387 + L1Md_A LINE L1 23 5586 -297 2 1272 9013 5 0 0 chrX 90159909 90160905 -76489391 + L1Md_A LINE L1 5587 6582 0 2 1272 687 268 204 24 chrX 90160933 90161349 -76488947 + L1M2 LINE L1 3481 3982 -2161 2 1272 294 29 0 0 chrX 90161373 90161408 -76488888 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 2 1272 6674 75 31 1 chrX 90161507 90162462 -76487834 - L1_Mus3 LINE L1 0 6638 5655 2 1272 4344 122 72 18 chrX 90162463 90163488 -76486808 + L1Md_F LINE L1 304 1344 -5380 2 1272 12908 20 38 38 chrX 90165999 90167013 -76483283 + L1_Mm LINE L1 3854 4905 -978 2 1272 234 183 46 77 chrX 90167013 90167078 -76483218 - RMER20A LTR ERVK -268 248 186 2 1272 12908 20 38 38 chrX 90167078 90167732 -76482564 + L1_Mm LINE L1 4906 5586 -297 2 1272 8044 48 1 5 chrX 90167732 90168731 -76481565 + L1Md_T LINE L1 5587 6581 -1 2 1272 2600 132 2 2 chrX 90168746 90169163 -76481133 - L1_Mm LINE L1 -215 5668 5252 2 1272 7209 108 5 3 chrX 90169273 90170992 -76479304 - L1_Mus3 LINE L1 -6 6632 4909 2 1272 1080 274 62 37 chrX 90171001 90171406 -76478890 - Lx6 LINE L1 -12 7448 7034 2 1272 349 209 0 54 chrX 90171560 90171671 -76478625 + L1M2 LINE L1 4220 4324 -1819 2 1272 321 125 0 0 chrX 90171704 90171760 -76478536 + (TGG)n Simple_repeat Simple_repeat 1 56 0 2 1272 495 0 0 0 chrX 90172470 90172525 -76477771 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 1272 10204 185 89 106 chrX 90172686 90174530 -76475766 - L1_Mur3 LINE L1 -540 5346 3319 2 1272 423 0 0 0 chrX 90174530 90174577 -76475719 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 1272 10204 154 77 139 chrX 90174577 90175741 -76474555 - L1_Mur3 LINE L1 -2562 3318 2067 2 1272 438 65 0 0 chrX 90175741 90175803 -76474493 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 1272 10204 177 73 115 chrX 90175803 90177026 -76473270 - L1_Mur3 LINE L1 -3814 2066 859 2 1272 397 317 90 22 chrX 90177071 90177439 -76472857 - L1_Mur3 LINE L1 -7287 441 49 2 1273 721 269 0 52 chrX 90178140 90178332 -76471964 + B3A SINE B2 1 182 -16 2 1273 21 0 0 0 chrX 90178346 90178367 -76471929 + AT_rich Low_complexity Low_complexity 1 21 0 2 1273 9411 74 18 12 chrX 90178367 90179772 -76470524 + Lx3_Mus LINE L1 5565 7009 0 2 1273 560 315 155 55 chrX 90180475 90180853 -76469443 - MLT1C LTR MaLR -2 465 42 2 1273 852 276 140 26 chrX 90180853 90181202 -76469094 + MLT1B LTR MaLR 1 389 -1 2 1273 560 315 155 55 chrX 90181202 90181243 -76469053 - MLT1C LTR MaLR -426 41 4 2 1273 459 0 0 0 chrX 90181453 90181504 -76468792 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1273 363 243 47 0 chrX 90181507 90181614 -76468682 - L1_Rod LINE L1 -138 5709 5598 2 1273 351 351 27 0 chrX 90181636 90181747 -76468549 + PB1D10 SINE Alu 2 115 -2 2 1273 218 307 115 25 chrX 90181763 90181920 -76468376 - MIR SINE MIR -15 247 77 2 1273 3104 64 2 23 chrX 90182466 90182896 -76467400 - BGLII LTR ERVK 0 421 1 2 1273 199 325 44 96 chrX 90184262 90184398 -76465898 - L2c LINE L2 -78 3309 3181 2 1273 386 365 126 39 chrX 90184837 90185839 -76464457 + L2 LINE L2 1732 2820 -599 2 1273 402 364 116 23 chrX 90185839 90186098 -76464198 + L1MEf LINE L1 2 284 -5916 2 1273 335 194 10 0 chrX 90186224 90186327 -76463969 + (CCCTAA)n Simple_repeat Simple_repeat 5 108 0 2 1273 520 290 0 0 chrX 90186419 90186526 -76463770 + RSINE1 SINE B4 8 114 -51 2 1273 22 0 0 0 chrX 90187792 90187814 -76462482 + AT_rich Low_complexity Low_complexity 1 22 0 2 1273 279 0 0 0 chrX 90188378 90188409 -76461887 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1273 33929 34 0 0 chrX 90188760 90194451 -76455845 + L1Md_T LINE L1 1 5589 -297 2 1273 9020 6 0 0 chrX 90194451 90195447 -76454849 + L1Md_T LINE L1 5590 6585 0 2 1273 202 325 63 79 chrX 90195564 90195691 -76454605 - MIR3 SINE MIR -30 178 54 2 1273 189 0 0 0 chrX 90196248 90196269 -76454027 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1273 2829 226 81 16 chrX 90196906 90197644 -76452652 - Lx5 LINE L1 0 7050 6265 2 1273 397 286 9 28 chrX 90197778 90197886 -76452410 - MER5A1 DNA MER1_type -58 108 3 2 1273 192 262 24 0 chrX 90198250 90198292 -76452004 - L2b LINE L2 -16 3359 3317 2 1273 356 0 0 22 chrX 90198896 90198941 -76451355 + (TAA)n Simple_repeat Simple_repeat 2 45 0 2 1273 252 280 28 0 chrX 90199639 90199746 -76450550 + (TA)n Simple_repeat Simple_repeat 1 110 0 2 1273 183 42 0 0 chrX 90200203 90200227 -76450069 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1273 697 244 122 37 chrX 90200685 90201013 -76449283 + L1MA8 LINE L1 3984 4339 -1801 2 1273 619 250 21 0 chrX 90201067 90201211 -76449085 + B1_Mus1 SINE Alu 2 148 0 2 1273 593 118 9 0 chrX 90201215 90201325 -76448971 + (TAGA)n Simple_repeat Simple_repeat 4 114 0 2 1273 4158 190 53 25 chrX 90201332 90202215 -76448081 + Lx5 LINE L1 6143 7050 0 2 1273 198 103 0 0 chrX 90202236 90202265 -76448031 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 2 1273 548 308 0 0 chrX 90202330 90202450 -76447846 + RSINE1 SINE B4 3 122 -43 2 1273 405 0 0 0 chrX 90202468 90202513 -76447783 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 1273 484 275 44 0 chrX 90202514 90202674 -76447622 + L1MA8 LINE L1 4435 4601 -1542 2 1273 1147 224 45 25 chrX 90202855 90203257 -76447039 + L1MA8 LINE L1 5877 6286 -5 2 1273 398 278 65 45 chrX 90203257 90203360 -76446936 + MER33 DNA MER1_type 121 235 -89 2 1273 252 288 24 36 chrX 90203360 90203443 -76446853 + ID4 SINE ID 1 82 -1 3 1273 398 278 65 45 chrX 90203443 90203539 -76446757 + MER33 DNA MER1_type 236 324 0 2 1273 290 419 14 0 chrX 90203762 90203910 -76446386 + MIR SINE MIR 4 153 -109 3 1273 5206 161 47 38 chrX 90204519 90204767 -76445529 + Lx7 LINE L1 4431 4649 -1231 3 1273 198 0 0 0 chrX 90204767 90204789 -76445507 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 1273 252 0 0 0 chrX 90204789 90204816 -76445480 + (GA)n Simple_repeat Simple_repeat 2 29 0 3 1273 5206 161 47 38 chrX 90204816 90205707 -76444589 + Lx7 LINE L1 4650 5580 -300 3 1273 2149 241 3 142 chrX 90205707 90206077 -76444219 - RMER19C LTR ERVK 0 611 281 3 1273 1124 88 0 0 chrX 90206077 90206224 -76444072 + B1_Mm SINE Alu 1 147 0 3 1273 2149 241 3 142 chrX 90206224 90206500 -76443796 - RMER19C LTR ERVK -331 280 55 3 1273 32265 77 1 16 chrX 90206501 90211986 -76438310 + L1Md_F2 LINE L1 187 5586 -297 3 1273 8087 47 5 0 chrX 90211986 90212975 -76437321 + L1Md_F2 LINE L1 5587 6580 -2 3 1273 308 56 241 0 chrX 90212975 90213029 -76437267 - RMER19C LTR ERVK -544 67 1 3 1273 4075 224 56 24 chrX 90213037 90214091 -76436205 + Lx7 LINE L1 5587 6674 -1022 3 1273 280 266 106 131 chrX 90214095 90214129 -76436167 + Lx7 LINE L1 6955 6980 -480 3 1273 978 212 58 15 chrX 90214129 90214335 -76435961 + B3 SINE B2 1 215 -1 3 1273 2985 194 62 19 chrX 90214335 90215022 -76435274 + Lx7 LINE L1 6981 7696 0 3 1273 358 253 0 92 chrX 90215378 90215487 -76434809 + MTE2a LTR MaLR 1 99 -280 3 1273 808 263 92 18 chrX 90215487 90215704 -76434592 + MTE2a LTR MaLR 59 291 -88 3 1273 381 167 0 53 chrX 90215713 90215808 -76434488 - Lx7 LINE L1 0 7696 7607 3 1273 182 128 0 25 chrX 90215845 90215885 -76434411 + A-rich Low_complexity Low_complexity 2 40 0 3 1273 399 70 0 0 chrX 90215947 90215978 -76434318 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 1273 414 57 0 0 chrX 90215978 90216031 -76434265 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1273 399 70 0 0 chrX 90216031 90216056 -76434240 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 1273 346 202 89 0 chrX 90216056 90216135 -76434161 + MTE2a LTR MaLR 294 379 0 3 1273 249 33 0 0 chrX 90216314 90216344 -76433952 + (TC)n Simple_repeat Simple_repeat 1 30 0 3 1273 465 50 0 0 chrX 90216344 90216403 -76433893 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 1273 649 250 134 11 chrX 90216444 90216630 -76433666 + B3 SINE B2 1 209 -7 3 1273 1221 174 146 0 chrX 90216898 90217328 -76432968 + L1VL2 LINE L1 895 1416 -4461 3 1273 4461 45 9 24 chrX 90217329 90217902 -76432394 + L1Md_F2 LINE L1 6019 6582 0 3 1273 1380 305 57 35 chrX 90217922 90218918 -76431378 - Lx8 LINE L1 -315 7329 6127 3 1273 876 345 7 14 chrX 90219784 90220063 -76430233 - B4A SINE B4 -10 282 6 3 1273 2605 67 106 11 chrX 90220075 90220452 -76429844 - L1Md_F2 LINE L1 -12 6570 6158 3 1273 1283 249 51 11 chrX 90220746 90221099 -76429197 - MER34A LTR ERV1 -21 550 184 3 1273 455 219 27 175 chrX 90221216 90221311 -76428985 - MER34A LTR ERV1 -415 156 84 3 1273 310 155 0 0 chrX 90221311 90221369 -76428927 - Lx7 LINE L1 0 7696 7639 3 1273 455 219 27 175 chrX 90221369 90221456 -76428840 - MER34A LTR ERV1 -488 83 1 3 1273 364 250 0 10 chrX 90221512 90221609 -76428687 + RMER21B LTR ERV1 87 182 -660 3 1273 692 224 122 39 chrX 90221640 90221844 -76428452 + RMER21B LTR ERV1 347 567 -275 3 1273 689 254 141 121 chrX 90222319 90222469 -76427827 - Lx7 LINE L1 0 7644 7502 3 1273 243 0 0 0 chrX 90222469 90222496 -76427800 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1273 689 254 141 121 chrX 90222496 90222900 -76427396 - Lx7 LINE L1 -143 7501 7080 3 1273 1887 252 34 17 chrX 90222997 90223466 -76426830 + Lx9 LINE L1 6410 6886 -758 3 1273 642 293 102 17 chrX 90223466 90223702 -76426594 - Lx8 LINE L1 -630 6843 6588 3 1273 562 289 68 46 chrX 90223853 90223966 -76426330 - Lx7 LINE L1 -1655 5989 5873 3 1273 314 23 23 0 chrX 90223966 90224009 -76426287 + (TTG)n Simple_repeat Simple_repeat 2 45 0 3 1273 820 255 65 20 chrX 90224009 90224276 -76426020 - Lx7 LINE L1 -1772 5872 5591 3 1273 3383 182 32 17 chrX 90224365 90224997 -76425299 - Lx6 LINE L1 0 7460 6820 3 1273 580 301 24 12 chrX 90225132 90225300 -76424996 + MLT1C LTR MaLR 297 466 -1 3 1273 428 298 35 65 chrX 90225589 90225790 -76424506 + L2a LINE L2 3231 3425 -1 3 1273 23 33 0 0 chrX 90227299 90227329 -76422967 + AT_rich Low_complexity Low_complexity 1 30 0 3 1273 1415 265 43 14 chrX 90227345 90227759 -76422537 + Lx6 LINE L1 7019 7444 -16 3 1273 13100 171 161 98 chrX 90228357 90229064 -76421232 + Lx4B LINE L1 895 1594 -4292 3 1273 261 0 0 0 chrX 90229064 90229093 -76421203 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1273 13100 163 139 148 chrX 90229093 90230804 -76419492 + Lx4B LINE L1 1595 3178 -2708 3 1273 7508 79 37 43 chrX 90230804 90231006 -76419290 + Lx3_Mus LINE L1 5870 6033 -976 3 1273 479 0 0 47 chrX 90231006 90231070 -76419226 + (GGGA)n Simple_repeat Simple_repeat 4 64 0 3 1273 7508 79 37 43 chrX 90231070 90232005 -76418291 + Lx3_Mus LINE L1 6034 6999 -10 3 1273 189 0 0 0 chrX 90232006 90232027 -76418269 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 3 1273 13100 163 139 148 chrX 90232027 90233093 -76417203 + Lx4B LINE L1 3179 4735 -1151 3 1273 215 31 31 0 chrX 90233093 90233125 -76417171 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 3 1273 13100 163 139 148 chrX 90233125 90233698 -76416598 + Lx4B LINE L1 4736 5229 -657 3 1273 1158 77 13 0 chrX 90233698 90233854 -76416442 + B2_Mm1t SINE B2 22 179 -14 3 1273 13100 163 139 148 chrX 90233854 90233909 -76416387 + Lx4B LINE L1 5230 5276 -610 3 1273 299 43 64 0 chrX 90233909 90233956 -76416340 + B2_Mm2 SINE B2 137 186 -9 3 1273 13100 163 139 148 chrX 90233956 90234207 -76416089 + Lx4B LINE L1 5277 5495 -391 3 1273 3548 13 2 0 chrX 90234207 90234602 -76415694 - MTA_Mm LTR MaLR 0 396 1 3 1273 13100 169 74 78 chrX 90234602 90235373 -76414923 + Lx4B LINE L1 5496 6258 -800 3 1273 3655 185 3 12 chrX 90235375 90236044 -76414252 + Lx4B LINE L1 6395 7057 -1 3 1273 976 344 66 3 chrX 90236129 90236491 -76413805 - MLT2B2 LTR ERVL 0 515 131 3 1273 7066 62 14 4 chrX 90236520 90237547 -76412749 - L1Md_F2 LINE L1 -33 6549 5513 3 1273 578 230 0 29 chrX 90237547 90237686 -76412610 - MLT2B2 LTR ERVL -378 137 3 3 1273 438 191 9 0 chrX 90237705 90237799 -76412497 + L1_Mur1 LINE L1 5458 5579 -754 3 1273 238 312 116 47 chrX 90238315 90238530 -76411766 + HAL1 LINE L1 1475 1704 -803 3 1273 540 30 0 0 chrX 90238535 90238601 -76411695 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 1273 272 289 70 54 chrX 90238911 90239152 -76411144 + HAL1 LINE L1 2039 2283 -224 3 1273 22 70 0 0 chrX 90239201 90239244 -76411052 + AT_rich Low_complexity Low_complexity 1 43 0 3 1273 495 272 107 26 chrX 90239244 90239478 -76410818 - Lx8 LINE L1 -5 7468 7216 3 1273 1122 219 0 0 chrX 90239657 90239867 -76410429 + B3 SINE B2 1 210 -6 3 1273 24 32 0 0 chrX 90239868 90239899 -76410397 + AT_rich Low_complexity Low_complexity 1 31 0 3 1273 1139 15 0 0 chrX 90239940 90240075 -76410221 + L1_Mus2 LINE L1 6431 6565 -1 3 1273 259 328 191 59 chrX 90240289 90240425 -76409871 - MIRb SINE MIR -109 159 6 3 1273 467 289 125 25 chrX 90241481 90241914 -76408382 + L1ME3B LINE L1 5522 5997 -243 3 1273 373 335 71 12 chrX 90242012 90242181 -76408115 + L1ME3B LINE L1 5984 6162 -78 3 1273 602 236 23 106 chrX 90242731 90242987 -76407309 + L1Md_F LINE L1 370 604 -5915 3 1273 8649 90 13 18 chrX 90242993 90245018 -76405278 + L1_Mus1 LINE L1 4502 6567 0 3 1273 3420 23 5 0 chrX 90245093 90245487 -76404809 - MTA_Mm LTR MaLR 0 396 1 3 1273 4170 29 0 4 chrX 90245702 90246193 -76404103 - L1Md_T LINE L1 0 6582 6094 3 1273 2859 26 0 0 chrX 90246193 90246545 -76403751 + L1Md_T LINE L1 5610 5961 -621 3 1273 296 259 0 0 chrX 90246801 90246882 -76403414 - Lx8 LINE L1 -1552 5921 5841 3 1273 267 300 0 20 chrX 90247233 90247335 -76402961 - Lx7 LINE L1 -19 7677 7578 3 1273 258 275 124 35 chrX 90247343 90247456 -76402840 - Charlie7a DNA MER1_type -136 136 14 3 1273 966 244 5 0 chrX 90249460 90249661 -76400635 + B3 SINE B2 1 202 -14 3 1273 5509 191 53 29 chrX 90249732 90250875 -76399421 - ORR1D1-int LTR MaLR -196 1174 4 3 1273 1535 224 70 25 chrX 90250875 90251233 -76399063 - ORR1D1 LTR MaLR 0 374 1 3 1273 388 346 85 12 chrX 90252784 90252948 -76397348 + MER117 DNA MER1_type 1 176 -21 3 1273 873 350 116 28 chrX 90253178 90254008 -76396288 + L2a LINE L2 878 1780 -1639 3 1273 666 314 100 81 chrX 90254026 90254424 -76395872 + L2a LINE L2 2412 2846 -573 3 1273 1420 140 14 0 chrX 90254424 90254645 -76395651 + URR1B DNA MER1_type 1 224 -1 3 1273 666 314 100 81 chrX 90254645 90254817 -76395479 + L2a LINE L2 2847 2998 -421 3 1273 554 191 31 130 chrX 90254817 90254979 -76395317 - B1_Mur1 SINE Alu -1 148 3 3 1273 666 312 65 6 chrX 90254979 90255151 -76395145 + L2a LINE L2 2994 3174 -252 3 1273 2793 47 0 9 chrX 90255322 90255693 -76394603 - L1_Mus1 LINE L1 0 6567 6226 3 1273 301 229 81 41 chrX 90255735 90255858 -76394438 + L1MC5 LINE L1 7037 7164 -797 3 1273 222 191 0 0 chrX 90255965 90256012 -76394284 + (CATA)n Simple_repeat Simple_repeat 2 48 0 3 1273 498 337 9 75 chrX 90256043 90256255 -76394041 - MER20 DNA MER1_type -1 218 21 3 1273 228 259 0 36 chrX 90256643 90256727 -76393569 + L1ME3B LINE L1 6091 6171 -69 3 1273 30 0 0 0 chrX 90257345 90257375 -76392921 + AT_rich Low_complexity Low_complexity 1 30 0 3 1273 329 198 24 36 chrX 90258765 90258849 -76391447 + MLT1E1A LTR MaLR 145 227 -453 3 1273 5019 103 81 28 chrX 90259008 90259807 -76390489 + RMER21B LTR ERV1 1 842 0 3 1273 225 182 0 170 chrX 90259807 90259844 -76390452 + MLT1E1A LTR MaLR 318 345 -309 3 1273 402 304 109 63 chrX 90259852 90260073 -76390223 + MLT1E1A LTR MaLR 450 680 0 3 1273 544 294 47 6 chrX 90260300 90260471 -76389825 - ID_B1 SINE B4 -46 178 1 3 1273 812 199 64 0 chrX 90260619 90260790 -76389506 - ORR1D1 LTR MaLR -192 182 1 3 1273 1107 88 0 7 chrX 90261023 90261171 -76389125 + B1_Mus1 SINE Alu 1 147 -1 3 1273 452 186 145 34 chrX 90261214 90261331 -76388965 + MER5A DNA MER1_type 1 130 -59 3 1273 195 114 0 0 chrX 90261646 90261681 -76388615 + (CAAAAA)n Simple_repeat Simple_repeat 4 38 0 3 1273 273 119 0 0 chrX 90261808 90261850 -76388446 + (CAG)n Simple_repeat Simple_repeat 2 43 0 3 1273 835 192 14 0 chrX 90262563 90262709 -76387587 + B1_Mus1 SINE Alu 1 148 0 3 1273 452 207 0 84 chrX 90262748 90262843 -76387453 + 4.5SRNA scRNA scRNA 5 91 -3 3 1273 520 213 118 0 chrX 90262845 90262972 -76387324 + B1_Mur1 SINE Alu 1 142 -7 3 1273 315 244 321 24 chrX 90263188 90263356 -76386940 + MER20 DNA MER1_type 1 218 -1 3 1273 878 150 14 0 chrX 90264456 90264596 -76385700 - B1_Mus1 SINE Alu -6 142 1 3 1273 489 299 171 38 chrX 90265823 90266092 -76384204 + MLT1J2 LTR MaLR 39 338 -110 3 1273 1323 99 0 5 chrX 90266440 90266633 -76383663 - L1_Mus1 LINE L1 0 6567 6376 3 1273 624 90 130 0 chrX 90266633 90266733 -76383563 - L1_Mus1 LINE L1 -295 6271 6159 3 1273 31341 72 16 4 chrX 90266760 90272023 -76378273 + L1Md_F2 LINE L1 262 5586 -297 3 1273 8447 29 1 0 chrX 90272023 90273005 -76377291 + L1Md_F2 LINE L1 5587 6569 -13 3 1273 722 192 6 0 chrX 90273326 90273482 -76376814 + GA-rich Low_complexity Low_complexity 3 159 0 3 1273 413 138 12 0 chrX 90273831 90273911 -76376385 + (GA)n Simple_repeat Simple_repeat 2 82 0 3 1273 195 308 73 27 chrX 90274050 90274160 -76376136 + L3 LINE CR1 864 978 -3511 3 1273 694 94 29 7 chrX 90274197 90274337 -76375959 + (TAGA)n Simple_repeat Simple_repeat 4 146 0 3 1273 327 206 29 29 chrX 90274507 90274577 -76375719 + B2_Mm2 SINE B2 15 84 -111 3 1273 818 76 0 17 chrX 90274578 90274698 -76375598 + (TCTCCC)n Simple_repeat Simple_repeat 3 120 0 3 1273 311 241 125 12 chrX 90274763 90274843 -76375453 + B3A SINE B2 99 187 -11 3 1273 2961 55 45 3 chrX 90275384 90275764 -76374532 + MTA_Mm LTR MaLR 1 396 0 4 1273 199 302 16 0 chrX 90276568 90276631 -76373665 - L2a LINE L2 -67 3359 3296 4 1273 24 0 0 0 chrX 90277659 90277683 -76372613 + AT_rich Low_complexity Low_complexity 1 24 0 4 1273 228 143 0 0 chrX 90277954 90277996 -76372300 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1273 207 289 26 26 chrX 90279008 90279086 -76371210 + (TCTG)n Simple_repeat Simple_repeat 1 78 0 4 1273 270 0 0 0 chrX 90279709 90279739 -76370557 + (TTG)n Simple_repeat Simple_repeat 2 31 0 4 1273 402 266 0 0 chrX 90280337 90280416 -76369880 - PB1D10 SINE Alu -8 109 31 4 1273 274 271 45 76 chrX 90280949 90281081 -76369215 + MER5B DNA MER1_type 6 133 -45 4 1273 458 33 17 0 chrX 90281736 90281796 -76368500 + (CTTTG)n Simple_repeat Simple_repeat 4 64 0 4 1273 265 256 0 103 chrX 90281796 90281875 -76368421 - ID4 SINE ID -9 74 2 4 1273 725 277 6 0 chrX 90282107 90282273 -76368023 - B3A SINE B2 -30 168 2 4 1273 365 167 22 0 chrX 90282375 90282465 -76367831 - Lx9 LINE L1 -7 7637 7546 4 1273 269 274 0 31 chrX 90282468 90282532 -76367764 + MER5B DNA MER1_type 116 177 -1 4 1273 502 286 141 34 chrX 90282685 90282862 -76367434 - MER63A DNA AcHobo 0 210 15 4 1273 511 238 55 14 chrX 90283202 90283347 -76366949 - MER5A1 DNA MER1_type -1 165 15 4 1273 306 292 26 17 chrX 90283647 90283762 -76366534 - PB1D9 SINE Alu -1 119 4 4 1273 347 60 20 0 chrX 90284578 90284628 -76365668 + (TC)n Simple_repeat Simple_repeat 1 51 0 4 1273 641 216 0 0 chrX 90284874 90284985 -76365311 + B1_Mur1 SINE Alu 12 122 -27 4 1273 432 0 0 0 chrX 90284986 90285034 -76365262 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1273 435 19 0 0 chrX 90285037 90285089 -76365207 + (GA)n Simple_repeat Simple_repeat 2 53 0 4 1273 241 371 14 43 chrX 90285769 90285907 -76364389 - MIR SINE MIR -18 244 111 4 1273 209 244 0 0 chrX 90286660 90286701 -76363595 - MER5A DNA MER1_type -2 187 147 4 1273 597 246 33 28 chrX 90288200 90288380 -76361916 + MER5A DNA MER1_type 6 186 -3 4 1273 319 261 14 0 chrX 90288617 90288686 -76361610 + MER63D DNA AcHobo 4 73 -988 4 1273 240 315 68 68 chrX 90288694 90288721 -76361575 - B2_Mm1t SINE B2 -6 187 159 4 1273 189 107 0 0 chrX 90288721 90288749 -76361547 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1273 642 26 0 0 chrX 90288749 90288824 -76361472 + (GA)n Simple_repeat Simple_repeat 1 76 0 4 1273 607 251 48 16 chrX 90288824 90288977 -76361319 - B3A SINE B2 -35 158 6 4 1273 315 96 0 0 chrX 90289085 90289137 -76361159 + (TTTG)n Simple_repeat Simple_repeat 3 54 0 4 1273 423 357 29 56 chrX 90289417 90289758 -76360538 - L2a LINE L2 0 3426 3095 4 1273 1164 347 44 25 chrX 90289766 90290248 -76360048 + LTR40a LTR ERVL 7 497 -22 4 1273 392 300 0 10 chrX 90290973 90291074 -76359222 + PB1D10 SINE Alu 1 100 -17 4 1273 284 316 0 48 chrX 90291099 90291182 -76359114 + ID4_ SINE ID 3 81 -2 4 1273 200 279 0 0 chrX 90291182 90291225 -76359071 + polypurine Low_complexity Low_complexity 1 43 0 4 1273 1273 197 88 15 chrX 90291225 90291488 -76358808 + MTD LTR MaLR 138 419 0 4 1273 4837 38 10 0 chrX 90291853 90292433 -76357863 + L1Md_T LINE L1 5997 6582 0 4 1273 654 279 0 0 chrX 90292719 90292859 -76357437 - B1F SINE Alu 0 149 10 4 1273 275 295 60 35 chrX 90292869 90292985 -76357311 - L2a LINE L2 -18 3408 3290 4 1273 5344 29 0 0 chrX 90293014 90293636 -76356660 + L1Md_F2 LINE L1 5961 6582 0 4 1273 2195 158 119 14 chrX 90293832 90294267 -76356029 + RMER1B Other Other 585 1065 -1 4 1273 371 325 17 0 chrX 90294425 90294545 -76355751 - L3b LINE CR1 -346 136 15 4 1273 215 132 26 0 chrX 90294857 90294895 -76355401 + C-rich Low_complexity Low_complexity 3 41 0 4 1273 649 229 35 21 chrX 90296972 90297115 -76353181 + B1_Mur3 SINE Alu 5 149 0 4 1273 327 303 32 78 chrX 90297271 90297296 -76353000 + B4A SINE B4 78 221 -68 4 1273 668 176 79 8 chrX 90297296 90297422 -76352874 + B1_Mur2 SINE Alu 9 143 -6 4 1273 213 178 0 0 chrX 90297505 90297550 -76352746 + A-rich Low_complexity Low_complexity 1 45 0 4 1273 383 172 0 0 chrX 90297630 90297688 -76352608 + PB1D10 SINE Alu 53 110 -7 4 1273 334 331 21 16 chrX 90297979 90298172 -76352124 + L1MC LINE L1 4051 4244 -1902 4 1273 438 20 0 0 chrX 90298438 90298489 -76351807 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1273 225 0 0 0 chrX 90298875 90298900 -76351396 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1273 270 0 0 0 chrX 90298900 90298929 -76351367 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 1273 246 294 12 64 chrX 90299679 90299788 -76350508 + MTE2b LTR MaLR 1 96 -283 4 1273 261 242 0 0 chrX 90300613 90300679 -76349617 - L1MB8 LINE L1 -2 6176 6111 4 1273 607 238 26 10 chrX 90300876 90301071 -76349225 - L1MB8 LINE L1 -230 5948 5751 4 1273 360 0 0 0 chrX 90301131 90301171 -76349125 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1273 1312 75 6 0 chrX 90301196 90301369 -76348927 - MTB_Mm LTR MaLR -53 354 181 4 1273 3344 37 86 0 chrX 90301371 90301801 -76348495 - L1Md_F2 LINE L1 0 6582 6116 4 1273 712 193 163 47 chrX 90301801 90301991 -76348305 - B3 SINE B2 -4 212 1 4 1273 427 232 78 35 chrX 90302010 90302228 -76348068 - L1MB8 LINE L1 -702 5462 5234 4 1273 292 322 23 0 chrX 90302250 90302337 -76347959 - MIRb SINE MIR -18 250 162 4 1273 4351 14 0 0 chrX 90303409 90303891 -76346405 + LTRIS_Mm LTR ERV1 1 482 0 4 1273 1998 265 118 30 chrX 90303978 90304792 -76345504 - Lx8 LINE L1 -5 7468 6583 4 1273 292 284 68 0 chrX 90304922 90305010 -76345286 - MLT1H LTR MaLR -2 547 454 4 1273 239 93 23 0 chrX 90305313 90305356 -76344940 + (TTG)n Simple_repeat Simple_repeat 2 45 0 4 1273 925 134 0 0 chrX 90305356 90305490 -76344806 - B1_Mus1 SINE Alu -10 138 5 4 1273 369 0 0 0 chrX 90305625 90305666 -76344630 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1273 1365 235 36 7 chrX 90305721 90306029 -76344267 - MTD LTR MaLR 0 419 103 4 1273 342 259 103 35 chrX 90306128 90306244 -76344052 - MTD LTR MaLR -295 124 1 4 1273 433 330 0 0 chrX 90306283 90306398 -76343898 - B3A SINE B2 -80 118 4 4 1273 441 0 0 0 chrX 90306707 90306756 -76343540 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1273 919 229 45 0 chrX 90306756 90306935 -76343361 - B3 SINE B2 -29 187 1 4 1273 1665 42 5 9 chrX 90306945 90307160 -76343136 + L1Md_F3 LINE L1 6357 6570 -14 4 1273 234 228 18 0 chrX 90307215 90307272 -76343024 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 159 445 345 46 68 chrX 90308377 90308672 -76341624 + MLT1H LTR MaLR 16 347 -202 4 1274 279 0 0 0 chrX 90309857 90309888 -76340408 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1274 743 210 28 0 chrX 90311059 90311202 -76339094 + B1_Mus1 SINE Alu 1 147 -1 4 1274 410 300 138 72 chrX 90311490 90311853 -76338443 - L1ME4a LINE L1 -106 6018 5632 4 1274 445 292 231 13 chrX 90312175 90312404 -76337892 + B4A SINE B4 1 279 -13 4 1274 319 327 44 44 chrX 90312550 90312710 -76337586 + LTR78 LTR ERV1 235 394 -910 4 1274 341 305 93 111 chrX 90313091 90313371 -76336925 + LTR78 LTR ERV1 1019 1293 -11 4 1274 352 329 142 14 chrX 90313386 90313605 -76336691 - MIR SINE MIR -11 251 5 4 1274 923 0 9 0 chrX 90314700 90314807 -76335489 + (TC)n Simple_repeat Simple_repeat 1 108 0 4 1274 189 107 0 0 chrX 90314963 90314991 -76335305 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1274 582 320 85 33 chrX 90316420 90316706 -76333590 - MLT1F2 LTR MaLR 0 560 236 4 1274 310 280 102 9 chrX 90316710 90316818 -76333478 + MLT1A LTR MaLR 1 118 -247 4 1274 276 111 0 0 chrX 90316845 90316890 -76333406 + (TC)n Simple_repeat Simple_repeat 1 45 0 4 1274 535 277 37 74 chrX 90316909 90317139 -76333157 + MLT1A LTR MaLR 172 395 -13 4 1274 464 341 41 29 chrX 90317163 90317335 -76332961 - MLT1F2 LTR MaLR -357 203 30 4 1274 186 43 0 0 chrX 90318120 90318143 -76332153 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1274 21 0 0 0 chrX 90318593 90318614 -76331682 + AT_rich Low_complexity Low_complexity 1 21 0 4 1274 1503 126 9 0 chrX 90318736 90318959 -76331337 + URR1B DNA MER1_type 1 225 0 4 1274 27 0 0 0 chrX 90319140 90319167 -76331129 + AT_rich Low_complexity Low_complexity 1 27 0 4 1274 383 364 58 58 chrX 90319302 90319435 -76330861 + B3A SINE B2 22 157 -41 4 1274 405 0 0 0 chrX 90319435 90319480 -76330816 + (TC)n Simple_repeat Simple_repeat 1 45 0 4 1274 486 33 0 0 chrX 90319480 90319539 -76330757 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 1274 383 364 58 58 chrX 90319539 90319576 -76330720 + B3A SINE B2 158 192 -6 4 1274 697 247 49 17 chrX 90319661 90319929 -76330367 - L1MDa LINE L1 -4276 2357 2093 4 1274 818 151 0 8 chrX 90319929 90320056 -76330240 - RLTR33 LTR ERVK -2 676 551 4 1274 2937 67 17 7 chrX 90320109 90320544 -76329752 - Lx3_Mus LINE L1 -800 6209 5763 4 1274 200 59 0 29 chrX 90320545 90320580 -76329716 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 4 1274 4293 195 55 2 chrX 90320581 90321482 -76328814 - Lx2B LINE L1 -30 6970 6022 4 1274 7593 50 0 7 chrX 90321485 90322785 -76327511 - L1Md_F3 LINE L1 -9 6575 5285 4 1274 1169 81 0 0 chrX 90322775 90322936 -76327360 - Lx3_Mus LINE L1 -1213 5796 5636 4 1274 5921 83 15 7 chrX 90322937 90323748 -76326548 + Lx3_Mus LINE L1 6185 7001 -8 4 1274 315 0 0 0 chrX 90323754 90323789 -76326507 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1274 1053 39 0 0 chrX 90323789 90323917 -76326379 - B1_Mm SINE Alu -8 139 12 4 1274 987 25 0 0 chrX 90324039 90324160 -76326136 - B1_Mus1 SINE Alu 0 148 28 4 1274 831 286 96 43 chrX 90324229 90325144 -76325152 + L1MDb LINE L1 1022 2011 -4622 4 1274 2591 32 0 3 chrX 90325144 90325455 -76324841 + L1Md_F3 LINE L1 6263 6572 -12 4 1274 586 294 132 62 chrX 90325455 90325581 -76324715 + L1MDb LINE L1 2012 2134 -4499 4 1274 314 234 175 44 chrX 90325581 90325764 -76324532 + L1MDb LINE L1 2425 2631 -4002 4 1274 349 244 11 32 chrX 90325814 90325907 -76324389 - MTE2a LTR MaLR -17 362 272 5 1274 235 288 17 0 chrX 90326086 90326145 -76324151 + RMER15 LTR ERVL 1 60 -515 5 1274 1827 238 144 8 chrX 90326156 90326643 -76323653 + RMER15 LTR ERVL 19 571 -4 5 1274 373 260 67 39 chrX 90326779 90326987 -76323309 + L1MDb LINE L1 2803 3016 -3521 4 1274 596 286 29 29 chrX 90326996 90327133 -76323163 + RSINE1 SINE B4 4 140 -25 5 1274 722 255 52 11 chrX 90327141 90327431 -76322865 + L1MDb LINE L1 3043 3347 -3184 4 1274 354 61 0 0 chrX 90327516 90327565 -76322731 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1274 636 257 220 15 chrX 90327566 90327961 -76322335 + L1MDb LINE L1 3368 3843 -2694 4 1274 851 173 0 7 chrX 90327965 90328105 -76322191 + B1_Mus1 SINE Alu 2 140 -8 5 1274 664 269 27 20 chrX 90328586 90328734 -76321562 + RSINE1 SINE B4 3 151 -14 5 1274 189 0 0 0 chrX 90328744 90328765 -76321531 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1274 504 0 0 0 chrX 90328765 90328820 -76321476 + (GA)n Simple_repeat Simple_repeat 2 57 0 5 1274 907 262 48 0 chrX 90329039 90329245 -76321051 + ID_B1 SINE B4 2 217 -7 5 1274 561 300 69 40 chrX 90329556 90329925 -76320371 + Charlie1a DNA MER1_type 1037 1454 -1 5 1274 1941 136 63 30 chrX 90329971 90330304 -76319992 + Lx4A LINE L1 6714 7057 -1 5 1274 678 197 79 14 chrX 90330812 90330951 -76319345 + ORR1D1 LTR MaLR 34 181 -193 5 1274 318 106 0 0 chrX 90330957 90331004 -76319292 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1274 4601 201 62 34 chrX 90331025 90332451 -76317845 - RMER1A Other Other -2 1028 15 5 1274 225 255 0 0 chrX 90332992 90333039 -76317257 + MIR SINE MIR 93 139 -123 5 1274 889 197 0 0 chrX 90333205 90333352 -76316944 - B1_Mur2 SINE Alu -1 148 2 5 1274 198 136 0 0 chrX 90333920 90333964 -76316332 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1274 387 0 0 0 chrX 90334101 90334144 -76316152 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1274 3652 113 0 10 chrX 90335333 90335912 -76314384 + L1_Mur1 LINE L1 5227 5799 -87 5 1274 4041 64 2 4 chrX 90335915 90336433 -76313863 + L1_Mus2 LINE L1 6050 6566 0 5 1274 7575 103 36 21 chrX 90336432 90337607 -76312689 + Lx3C LINE L1 5783 6974 -2 5 1274 5171 33 2 0 chrX 90337657 90338263 -76312033 + L1Md_T LINE L1 5974 6580 -2 5 1274 282 116 0 0 chrX 90338602 90338645 -76311651 + (A)n Simple_repeat Simple_repeat 1 43 0 5 1274 192 200 0 0 chrX 90338690 90338730 -76311566 + CT-rich Low_complexity Low_complexity 3 42 0 5 1274 1427 243 75 59 chrX 90338750 90338880 -76311416 + Lx6 LINE L1 7011 7129 -331 5 1274 1023 113 11 17 chrX 90338880 90339060 -76311236 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 5 1274 1427 243 75 59 chrX 90339060 90339353 -76310943 + Lx6 LINE L1 7130 7441 -19 5 1274 1219 175 143 28 chrX 90339448 90339498 -76310798 + Lx9 LINE L1 7233 7282 -362 5 1274 3485 19 155 0 chrX 90339498 90339925 -76310371 + MT2_Mm LTR ERVL 1 493 0 5 1274 1219 175 143 28 chrX 90339925 90340097 -76310199 + Lx9 LINE L1 7283 7492 -152 5 1274 1916 180 44 8 chrX 90340097 90340462 -76309834 - ORR1C1 LTR MaLR 0 378 1 5 1274 1219 175 143 28 chrX 90340462 90340602 -76309694 + Lx9 LINE L1 7493 7637 -7 5 1274 970 86 0 7 chrX 90340654 90340806 -76309490 + L1_Mus4 LINE L1 6486 6636 0 5 1274 284 169 68 0 chrX 90340846 90340905 -76309391 + L1M2 LINE L1 5769 5831 -460 5 1274 392 199 158 8 chrX 90340904 90341031 -76309265 - RMER1C Other Other 0 1342 1197 5 1274 641 326 92 72 chrX 90341073 90341243 -76309053 + MLT1H1 LTR MaLR 14 191 -364 5 1274 2600 45 48 6 chrX 90341243 90341580 -76308716 + L1_Mus1 LINE L1 6217 6567 0 5 1274 641 311 79 60 chrX 90341580 90341899 -76308397 + MLT1H1 LTR MaLR 192 548 0 5 1274 1081 215 14 0 chrX 90342041 90342250 -76308046 + B3 SINE B2 3 214 -2 5 1274 192 152 0 0 chrX 90342536 90342569 -76307727 + GA-rich Low_complexity Low_complexity 1 33 0 5 1274 481 236 142 16 chrX 90344441 90344621 -76305675 - MLT1C LTR MaLR -197 193 4 5 1274 222 390 0 0 chrX 90344622 90344699 -76305597 - L2a LINE L2 -28 3398 3322 5 1274 327 258 112 0 chrX 90345097 90345186 -76305110 - B1_Mus1 SINE Alu -26 122 24 5 1274 852 225 0 0 chrX 90345558 90345709 -76304587 - B3 SINE B2 -24 192 42 5 1274 21 0 0 0 chrX 90345759 90345780 -76304516 + AT_rich Low_complexity Low_complexity 1 21 0 5 1274 2562 255 50 38 chrX 90345818 90346634 -76303662 + Lx8 LINE L1 6198 7023 -450 5 1274 658 244 44 7 chrX 90346683 90346819 -76303477 - RSINE1 SINE B4 -21 144 4 5 1274 598 242 20 13 chrX 90346825 90346976 -76303320 + Lx8 LINE L1 7071 7222 -251 5 1274 401 335 49 12 chrX 90346966 90347129 -76303167 + Lx8 LINE L1 7152 7320 -153 5 1274 465 275 141 51 chrX 90347216 90347450 -76302846 + Lx8 LINE L1 7207 7461 -12 5 1274 369 0 0 0 chrX 90347450 90347491 -76302805 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 5 1274 572 335 87 11 chrX 90347831 90348097 -76302199 - L3b LINE CR1 -119 363 78 5 1274 421 251 54 49 chrX 90348772 90348977 -76301319 - Charlie1b DNA MER1_type 0 523 318 5 1274 578 256 46 184 chrX 90348979 90349244 -76301052 - Lx8 LINE L1 0 7473 7231 5 1274 773 295 5 5 chrX 90349244 90349445 -76300851 + B3 SINE B2 2 202 -14 5 1274 578 256 46 184 chrX 90349445 90349571 -76300725 - Lx8 LINE L1 -243 7230 7136 5 1274 443 242 21 0 chrX 90350067 90350162 -76300134 - Lx8 LINE L1 -330 7143 7047 5 1274 342 0 0 0 chrX 90350190 90350228 -76300068 + (TC)n Simple_repeat Simple_repeat 2 39 0 5 1274 390 74 0 0 chrX 90350228 90350281 -76300015 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 1274 267 233 33 16 chrX 90350301 90350362 -76299934 - B4 SINE B4 -2 290 229 5 1274 500 278 149 38 chrX 90350417 90350679 -76299617 - B4A SINE B4 -1 291 1 5 1274 729 288 71 25 chrX 90350679 90350897 -76299399 - B4 SINE B4 -59 233 5 5 1274 487 253 101 87 chrX 90350954 90351231 -76299065 - Lx8 LINE L1 -41 7432 7152 5 1274 465 250 23 39 chrX 90351380 90351509 -76298787 - Charlie1b DNA MER1_type -396 127 1 5 1274 1591 194 33 81 chrX 90351842 90352030 -76298266 + ORR1D1 LTR MaLR 1 172 -202 5 1274 207 0 0 0 chrX 90352030 90352053 -76298243 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 5 1274 1591 194 33 81 chrX 90352053 90352257 -76298039 + ORR1D1 LTR MaLR 173 374 0 5 1274 219 207 17 17 chrX 90352499 90352558 -76297738 + T-rich Low_complexity Low_complexity 2 60 0 5 1274 327 25 0 0 chrX 90352828 90352868 -76297428 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1274 23 0 0 0 chrX 90352979 90353002 -76297294 + AT_rich Low_complexity Low_complexity 1 23 0 5 1274 180 265 87 122 chrX 90353607 90353688 -76296608 + MIRm SINE MIR 100 265 -11 5 1274 196 231 11 143 chrX 90353688 90353779 -76296517 + L2c LINE L2 3296 3374 -13 5 1274 264 339 0 92 chrX 90353959 90354051 -76296245 - MIR SINE MIR -61 147 62 5 1274 1208 115 130 0 chrX 90354051 90354251 -76296045 - URR1A DNA MER1_type 0 226 1 5 1274 264 339 0 92 chrX 90354251 90354288 -76296008 - MIR SINE MIR -147 61 30 5 1274 232 300 24 36 chrX 90354431 90354514 -76295782 - ID4_ SINE ID 0 83 2 5 1274 2022 54 0 8 chrX 90354553 90354814 -76295482 + L1Md_A LINE L1 6323 6581 -1 5 1274 362 266 21 31 chrX 90354919 90355016 -76295280 + RSINE1 SINE B4 7 102 -63 5 1274 360 0 0 0 chrX 90355017 90355057 -76295239 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1274 602 234 66 61 chrX 90355085 90355281 -76295015 + B3A SINE B2 2 198 0 5 1274 3685 23 11 0 chrX 90355314 90355750 -76294546 + L1Md_F2 LINE L1 6128 6568 -14 5 1274 318 215 0 12 chrX 90355889 90355969 -76294327 - Ricksha_c DNA MuDR -1610 438 360 5 1274 342 98 0 0 chrX 90356397 90356448 -76293848 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 1274 492 333 56 0 chrX 90356487 90356631 -76293665 - RSINE1 SINE B4 -6 159 8 5 1274 285 151 0 0 chrX 90356788 90356841 -76293455 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1274 1079 167 55 5 chrX 90357496 90357695 -76292601 + B3 SINE B2 4 212 -4 5 1274 254 274 0 0 chrX 90358522 90358584 -76291712 - MER58D DNA MER1_type -1 385 324 5 1274 246 258 75 0 chrX 90359010 90359103 -76291193 - L1MC4a LINE L1 -2 7880 7781 5 1274 561 268 35 35 chrX 90359879 90360049 -76290247 + Tigger5 DNA MER2_type 9 178 -2228 5 1274 297 289 82 0 chrX 90360097 90360194 -76290102 + Tigger5 DNA MER2_type 2301 2405 -1 5 1274 302 266 8 99 chrX 90360209 90360330 -76289966 - L1MC4a LINE L1 -167 7715 7606 5 1274 973 122 0 7 chrX 90360390 90360531 -76289765 + B1_Mur4 SINE Alu 2 141 -9 5 1274 521 265 61 4 chrX 90360608 90360854 -76289442 - L1MC4a LINE L1 -1384 6498 6239 5 1274 807 279 128 9 chrX 90360860 90361312 -76288984 + L1MA4 LINE L1 5790 6295 -5 5 1274 24 0 0 0 chrX 90361333 90361357 -76288939 + AT_rich Low_complexity Low_complexity 1 24 0 5 1274 271 261 119 19 chrX 90361364 90361524 -76288772 + L1M3 LINE L1 2612 2787 -3353 5 1274 491 227 56 14 chrX 90361622 90361765 -76288531 + B1F SINE Alu 1 149 0 5 1274 637 303 40 6 chrX 90361784 90361960 -76288336 + B3A SINE B2 1 182 -16 5 1274 296 200 55 0 chrX 90362006 90362061 -76288235 + ID4_ SINE ID 2 59 -24 5 1274 302 318 18 36 chrX 90362151 90362262 -76288034 + PB1D10 SINE Alu 2 110 -7 5 1274 709 189 33 15 chrX 90362371 90362526 -76287770 - ORR1D1 LTR MaLR 0 419 242 5 1274 1952 151 68 113 chrX 90362548 90362788 -76287508 - MTC LTR MaLR 0 421 226 5 1274 851 73 19 38 chrX 90362788 90362945 -76287351 - L1_Mus3 LINE L1 -1 6637 6484 5 1274 1952 151 68 113 chrX 90362945 90363145 -76287151 - MTC LTR MaLR -196 225 1 5 1274 584 165 12 168 chrX 90363155 90363322 -76286974 - ORR1D1 LTR MaLR -231 143 3 5 1274 736 266 21 11 chrX 90363491 90363681 -76286615 + B3A SINE B2 1 192 -6 5 1274 245 330 0 64 chrX 90363699 90363809 -76286487 + PB1D7 SINE Alu 1 103 -17 5 1274 7424 39 0 0 chrX 90363862 90364782 -76285514 - L1Md_F2 LINE L1 -14 6568 5649 5 1274 275 297 121 85 chrX 90364815 90364952 -76285344 + MLT1H1 LTR MaLR 65 209 -346 5 1274 180 0 0 0 chrX 90364952 90364972 -76285324 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 1274 275 297 121 85 chrX 90364972 90365033 -76285263 + MLT1H1 LTR MaLR 210 269 -286 5 1274 2348 155 18 5 chrX 90366486 90366875 -76283421 - ORR1B1 LTR MaLR 0 394 1 5 1274 384 59 0 0 chrX 90367114 90367165 -76283131 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1274 715 212 7 46 chrX 90367214 90367367 -76282929 - B1_Mur3 SINE Alu -1 148 2 5 1274 297 0 0 0 chrX 90367657 90367690 -76282606 + (CCTG)n Simple_repeat Simple_repeat 2 34 0 5 1274 553 263 53 0 chrX 90368108 90368260 -76282036 - RMER15 LTR ERVL -13 562 403 5 1274 291 307 22 0 chrX 90368307 90368444 -76281852 - L1M2 LINE L1 -1102 5041 4902 5 1274 252 77 0 0 chrX 90368661 90368700 -76281596 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 6 1274 456 346 21 11 chrX 90369056 90369243 -76281053 - Lx8 LINE L1 -248 7225 7037 6 1274 301 316 41 21 chrX 90369654 90369751 -76280545 + B1F SINE Alu 4 102 -47 6 1274 324 289 0 0 chrX 90369792 90369868 -76280428 + ID4 SINE ID 3 78 -5 6 1274 581 259 22 7 chrX 90370184 90370320 -76279976 + RSINE1 SINE B4 3 140 -25 6 1274 2820 62 0 49 chrX 90370838 90371266 -76279030 + L1_Mus2 LINE L1 6194 6566 0 6 1274 410 282 56 80 chrX 90371268 90371430 -76278866 + RSINE1 SINE B4 8 165 0 6 1274 3056 55 27 10 chrX 90372499 90372903 -76277393 - IAPLTR2a LTR ERVK 0 411 1 6 1274 231 170 0 0 chrX 90372967 90373014 -76277282 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1274 297 374 56 21 chrX 90373227 90373369 -76276927 + MIRb SINE MIR 41 187 -81 6 1274 869 91 144 0 chrX 90373514 90373646 -76276650 + B2_Mm1t SINE B2 1 151 -42 6 1274 348 138 13 34 chrX 90373674 90373741 -76276555 + B2_Mm2 SINE B2 46 116 -82 6 1274 333 0 0 0 chrX 90373756 90373793 -76276503 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 6 1274 1819 222 26 13 chrX 90374066 90374454 -76275842 - Lx6 LINE L1 -3 7457 7065 6 1274 580 329 62 0 chrX 90375886 90376096 -76274200 + ID_B1 SINE B4 2 224 0 6 1274 518 293 52 34 chrX 90376403 90376663 -76273633 - L1M5 LINE L1 -351 5827 5567 6 1274 446 133 0 62 chrX 90377262 90377342 -76272954 - ID4 SINE ID -6 77 3 6 1274 12849 117 24 4 chrX 90378012 90380801 -76269495 + L1Md_F LINE L1 392 3239 -2644 6 1274 332 297 16 33 chrX 90380858 90380980 -76269316 - PB1 SINE Alu -7 120 1 6 1274 240 179 28 9 chrX 90381429 90381536 -76268760 + (TATATG)n Simple_repeat Simple_repeat 2 110 0 6 1274 371 311 0 0 chrX 90381547 90381621 -76268675 + B3A SINE B2 48 121 -77 6 1274 8032 38 1 6 chrX 90381629 90383101 -76267195 - L1Md_F2 LINE L1 -2 6580 5121 6 1274 2604 56 0 0 chrX 90383100 90383438 -76266858 + L1Md_F2 LINE L1 4758 5095 -788 6 1274 195 322 20 91 chrX 90383455 90383554 -76266742 - MER5B DNA MER1_type -30 148 57 6 1274 8934 90 1 22 chrX 90383570 90385681 -76264615 - L1_Mus1 LINE L1 -3 6564 4500 6 1274 508 255 84 7 chrX 90385681 90385823 -76264473 + MTD LTR MaLR 267 419 0 6 1274 2145 203 94 85 chrX 90385823 90386070 -76264226 + MTD-int LTR MaLR 1 242 -1016 6 1274 786 210 0 0 chrX 90386070 90386213 -76264083 + B1_Mur2 SINE Alu 2 144 -5 6 1274 2145 203 94 85 chrX 90386213 90386638 -76263658 + MTD-int LTR MaLR 243 679 -579 6 1274 5571 103 40 3 chrX 90386754 90387836 -76262460 + L1VL2 LINE L1 407 1535 -2379 6 1274 11078 100 11 32 chrX 90387844 90389736 -76260560 + L1VL2 LINE L1 2219 4099 -1784 6 1274 1877 31 13 9 chrX 90389953 90390184 -76260112 - L1Md_F3 LINE L1 -2 6582 6351 6 1274 388 294 39 8 chrX 90390270 90390397 -76259899 + RMER10B LTR ERVL 268 398 0 6 1274 1295 82 16 0 chrX 90390802 90390984 -76259312 + B2_Mm1t SINE B2 1 185 -8 6 1274 255 182 109 0 chrX 90391027 90391082 -76259214 - ID4 SINE ID -12 71 11 6 1274 441 0 0 0 chrX 90391308 90391357 -76258939 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 1274 246 32 0 0 chrX 90391500 90391531 -76258765 + (TC)n Simple_repeat Simple_repeat 1 31 0 6 1274 846 324 104 30 chrX 90392170 90392574 -76257722 - Lx8 LINE L1 -181 7292 6859 6 1274 1461 174 56 121 chrX 90392575 90392810 -76257486 - MTC LTR MaLR 0 421 210 6 1274 1157 75 0 0 chrX 90392810 90392957 -76257339 - B1_Mus2 SINE Alu 0 147 1 6 1274 1461 174 56 121 chrX 90392957 90393094 -76257202 - MTC LTR MaLR -212 209 73 6 1274 841 122 0 0 chrX 90393229 90393352 -76256944 + B1_Mur2 SINE Alu 21 143 -6 6 1274 437 0 19 0 chrX 90393360 90393413 -76256883 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 6 1274 357 359 0 10 chrX 90393413 90393517 -76256779 - RSINE1 SINE B4 -50 115 13 6 1274 214 309 81 9 chrX 90393542 90393653 -76256643 - L2a LINE L2 0 3426 3308 6 1274 254 349 165 23 chrX 90393780 90393956 -76256340 - L2a LINE L2 -489 2930 2730 6 1274 271 305 41 25 chrX 90393990 90394111 -76256185 - L2a LINE L2 -838 2581 2459 6 1274 535 277 56 43 chrX 90394188 90394350 -76255946 + RSINE1 SINE B4 2 165 0 6 1274 280 173 0 0 chrX 90394446 90394498 -76255798 + PB1D7 SINE Alu 41 92 -28 6 1274 330 248 127 42 chrX 90394534 90394652 -76255644 + ID_B1 SINE B4 88 215 -9 6 1274 688 221 54 0 chrX 90394672 90394837 -76255459 + B3A SINE B2 2 175 -41 6 1274 923 122 6 64 chrX 90394927 90395084 -76255212 + B1_Mur4 SINE Alu 2 149 -1 6 1274 499 198 10 0 chrX 90395190 90395291 -76255005 + ID_B1 SINE B4 114 215 -9 6 1274 499 206 68 10 chrX 90395301 90395404 -76254892 + RSINE1 SINE B4 6 114 -51 6 1274 369 0 0 0 chrX 90395404 90395445 -76254851 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1274 369 0 0 0 chrX 90395445 90395485 -76254811 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 1274 30 0 0 0 chrX 90395485 90395515 -76254781 + AT_rich Low_complexity Low_complexity 1 30 0 6 1274 342 123 0 0 chrX 90396006 90396063 -76254233 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1274 1027 52 89 0 chrX 90396190 90396325 -76253971 + B1_Mus1 SINE Alu 1 147 -1 6 1274 564 15 0 0 chrX 90396350 90396415 -76253881 + (CA)n Simple_repeat Simple_repeat 2 66 0 6 1274 395 235 118 0 chrX 90396469 90396571 -76253725 - B1_Mur1 SINE Alu 0 149 36 6 1274 856 224 10 58 chrX 90396589 90396797 -76253499 + B3A SINE B2 1 198 0 6 1274 383 38 0 19 chrX 90396818 90396872 -76253424 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1274 488 206 131 0 chrX 90396872 90396979 -76253317 - B3A SINE B2 -51 147 27 6 1274 1920 221 10 10 chrX 90397000 90397394 -76252902 - Lx5 LINE L1 -11 7039 6646 6 1274 1876 188 31 6 chrX 90397396 90397755 -76252541 - Lx5 LINE L1 -621 6429 6062 6 1274 2435 144 50 11 chrX 90397761 90398225 -76252071 - RLTR11A2 LTR ERVK 0 527 46 6 1274 1600 144 0 20 chrX 90398239 90398493 -76251803 - Lx5 LINE L1 -988 6062 5814 6 1274 555 203 32 16 chrX 90398548 90398673 -76251623 - ID_B1 SINE B4 -4 220 94 6 1274 284 247 42 63 chrX 90398589 90398684 -76251612 - PB1D7 SINE Alu -22 98 6 6 1274 392 271 28 9 chrX 90398702 90398810 -76251486 - PB1D7 SINE Alu -8 112 3 6 1274 727 217 80 0 chrX 90398836 90398974 -76251322 - B1_Mur1 SINE Alu 0 149 1 6 1274 440 248 110 83 chrX 90399024 90399169 -76251127 + RSINE1 SINE B4 17 165 0 6 1274 757 157 40 54 chrX 90399212 90399360 -76250936 + B1_Mus2 SINE Alu 1 146 -1 6 1274 310 156 31 0 chrX 90399632 90399696 -76250600 + L1M4 LINE L1 4528 4593 -1553 6 1274 417 319 36 7 chrX 90399842 90399981 -76250315 + B1F SINE Alu 1 143 -6 6 1274 297 0 0 0 chrX 90399981 90400014 -76250282 + (GA)n Simple_repeat Simple_repeat 1 33 0 6 1274 663 78 0 0 chrX 90400014 90400104 -76250192 + (GGAA)n Simple_repeat Simple_repeat 4 93 0 6 1274 411 250 0 0 chrX 90400114 90400210 -76250086 + L1MB2 LINE L1 6020 6115 -56 6 1274 1055 90 0 20 chrX 90400261 90400272 -76250024 - B1_Mus2 SINE Alu -2 145 136 6 1274 333 0 37 37 chrX 90400272 90400326 -76249970 + (TTTG)n Simple_repeat Simple_repeat 3 56 0 6 1274 1055 90 0 20 chrX 90400326 90400462 -76249834 - B1_Mus2 SINE Alu -12 135 1 6 1274 365 277 10 19 chrX 90400543 90400646 -76249650 - PB1D9 SINE Alu -13 107 6 6 1274 1092 227 58 27 chrX 90400646 90400940 -76249356 + Lx3C LINE L1 6670 6972 -4 6 1274 192 111 0 0 chrX 90401297 90401333 -76248963 + (A)n Simple_repeat Simple_repeat 1 36 0 6 1274 254 260 27 14 chrX 90402234 90402308 -76247988 + GA-rich Low_complexity Low_complexity 3 77 0 6 1274 286 232 130 0 chrX 90402627 90402696 -76247600 - B4A SINE B4 -213 79 2 6 1274 387 271 63 63 chrX 90402927 90403069 -76247227 + ID_B1 SINE B4 20 161 -63 6 1274 213 277 56 65 chrX 90402992 90403100 -76247196 + PB1D7 SINE Alu 13 119 -1 6 1274 4918 125 19 9 chrX 90403303 90404061 -76246235 + Lx LINE L1 5885 6649 -5 6 1274 793 228 0 0 chrX 90404066 90404211 -76246085 + B1_Mur1 SINE Alu 2 146 -3 6 1274 365 275 128 0 chrX 90405713 90405822 -76244474 + B1F SINE Alu 9 131 -18 6 1274 369 62 0 0 chrX 90405832 90405880 -76244416 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 1274 325 288 120 0 chrX 90405940 90406114 -76244182 + MIR SINE MIR 32 225 -37 6 1274 1375 301 42 10 chrX 90406694 90407287 -76243009 + L1ME3A LINE L1 5295 5906 -267 6 1274 564 293 124 16 chrX 90407287 90407380 -76242916 + ID_B1 SINE B4 5 99 -125 6 1274 2837 21 61 0 chrX 90407380 90407706 -76242590 - ORR1A0 LTR MaLR 0 346 1 6 1274 14529 50 3 3 chrX 90407706 90409499 -76240797 - ORR1A0-int LTR MaLR 0 1792 1 6 1274 3040 26 3 0 chrX 90409499 90409844 -76240452 - ORR1A0 LTR MaLR 0 346 1 6 1274 564 293 124 16 chrX 90409844 90409942 -76240354 + ID_B1 SINE B4 100 217 -7 6 1274 511 273 17 90 chrX 90409966 90410143 -76240153 + RSINE1 SINE B4 2 165 0 6 1274 7370 50 1 0 chrX 90410314 90411283 -76239013 + L1Md_F2 LINE L1 5677 6582 0 6 1274 372 23 1 1 chrX 90411508 90411557 -76238739 + L1_Mus1 LINE L1 5908 5955 -611 6 1274 1041 68 6 82 chrX 90411557 90411716 -76238580 + B1_Mus2 SINE Alu 1 147 0 6 1274 255 119 28 69 chrX 90411716 90411738 -76238558 + L1_Mus1 LINE L1 5956 5976 -590 6 1274 4487 53 69 15 chrX 90411758 90412354 -76237942 + L1_Mus1 LINE L1 5940 6567 0 6 1274 2071 104 62 0 chrX 90412488 90412795 -76237501 + ORR1A3 LTR MaLR 1 326 0 6 1274 218 128 0 60 chrX 90412875 90412925 -76237371 + T-rich Low_complexity Low_complexity 3 49 0 6 1274 340 293 0 10 chrX 90412964 90413064 -76237232 - RMER21B LTR ERV1 -649 193 95 6 1274 440 267 82 7 chrX 90413214 90413361 -76236935 + B3A SINE B2 38 195 -3 6 1274 441 0 0 0 chrX 90413464 90413513 -76236783 + (GA)n Simple_repeat Simple_repeat 2 50 0 6 1274 351 183 14 118 chrX 90413546 90413757 -76236539 + RMER17C LTR ERVK 86 274 -136 6 1274 204 163 0 23 chrX 90413823 90413867 -76236429 + A-rich Low_complexity Low_complexity 2 44 0 6 1274 2926 215 78 31 chrX 90413868 90414642 -76235654 + L1Md_F LINE L1 290 1099 -5420 6 1274 4970 141 26 7 chrX 90414630 90416173 -76234123 + L1Md_F LINE L1 266 1839 -4044 7 1274 3760 93 2 2 chrX 90416191 90416699 -76233597 - L1_Mm LINE L1 -87 5796 5289 7 1274 8362 39 2 3 chrX 90416721 90417858 -76232438 - L1Md_F2 LINE L1 0 6582 5447 7 1274 29294 50 4 3 chrX 90417853 90421767 -76228529 - L1Md_A LINE L1 -2 6580 2655 7 1274 3123 23 0 0 chrX 90421767 90422113 -76228183 - ORR1A0 LTR MaLR 0 346 1 7 1274 14446 54 3 1 chrX 90422113 90423901 -76226395 - ORR1A0-int LTR MaLR 0 1792 1 7 1274 3057 23 3 0 chrX 90423901 90424246 -76226050 - ORR1A0 LTR MaLR 0 346 1 7 1274 29294 53 5 3 chrX 90424246 90424722 -76225574 - L1Md_A LINE L1 -3229 2654 2184 7 1274 2637 199 88 45 chrX 90424723 90425414 -76224882 + L1Md_F LINE L1 143 863 -5656 7 1274 2438 136 39 10 chrX 90425834 90426242 -76224054 - MTC LTR MaLR 0 421 2 7 1274 3161 142 19 0 chrX 90426242 90426830 -76223466 + Lx2B LINE L1 5502 6097 -903 7 1274 2025 104 0 7 chrX 90426834 90427134 -76223162 + MT2B LTR ERVL 1 298 -303 7 1274 446 203 26 86 chrX 90427031 90427182 -76223114 - ORR1A2 LTR MaLR -185 142 1 7 1274 3508 222 59 27 chrX 90427183 90428034 -76222262 + Lx2B LINE L1 6096 6973 -27 7 1274 254 260 27 14 chrX 90429307 90429381 -76220915 + GA-rich Low_complexity Low_complexity 3 77 0 7 1274 286 232 130 0 chrX 90429700 90429769 -76220527 - B4A SINE B4 -213 79 2 7 1274 403 255 67 60 chrX 90430000 90430150 -76220146 + ID_B1 SINE B4 20 170 -54 7 1274 258 245 48 48 chrX 90430070 90430173 -76220123 + PB1D9 SINE Alu 17 119 -1 7 1274 429 270 18 0 chrX 90430986 90431097 -76219199 - PB1D10 SINE Alu 0 117 5 7 1274 25291 60 1 1 chrX 90431232 90434417 -76215879 + L1_Mm LINE L1 2500 5685 -198 7 1274 9161 4 0 0 chrX 90434456 90435953 -76214343 - L1Md_A LINE L1 0 6582 5086 7 1274 7187 62 2 0 chrX 90435953 90436980 -76213316 + L1Md_F2 LINE L1 5668 6582 0 7 1274 1266 231 31 75 chrX 90437058 90437442 -76212854 - MTD LTR MaLR -2 417 51 7 1274 613 178 138 8 chrX 90437437 90437567 -76212729 + MTC LTR MaLR 254 400 -21 7 1274 215 182 36 0 chrX 90437895 90437950 -76212346 + T-rich Low_complexity Low_complexity 3 59 0 7 1274 3403 164 10 0 chrX 90437953 90438543 -76211753 + L1_Mur2 LINE L1 4761 5356 -521 7 1274 313 233 11 22 chrX 90438753 90438845 -76211451 + Charlie2b DNA MER1_type 1805 1895 -887 7 1274 218 324 56 0 chrX 90438862 90438933 -76211363 - ID4 SINE ID 0 83 9 7 1274 3846 63 0 4 chrX 90438966 90439445 -76210851 + L1Md_F2 LINE L1 6094 6570 -12 7 1274 615 192 0 8 chrX 90439448 90439569 -76210727 - B1_Mur2 SINE Alu -13 136 17 7 1274 234 333 21 0 chrX 90439583 90439676 -76210620 - Lx8 LINE L1 -227 7246 7152 7 1275 237 289 20 82 chrX 90439782 90439880 -76210416 - PB1 SINE Alu -30 97 6 7 1275 274 283 172 0 chrX 90440006 90440105 -76210191 - PB1D10 SINE Alu -1 116 1 7 1275 414 0 0 0 chrX 90440154 90440200 -76210096 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1275 459 230 24 3 chrX 90440232 90440345 -76209951 - B3A SINE B2 -99 117 3 7 1275 27 49 0 0 chrX 90440449 90440490 -76209806 + AT_rich Low_complexity Low_complexity 1 41 0 7 1275 981 221 51 0 chrX 90440640 90440835 -76209461 - B3 SINE B2 -10 206 2 7 1275 226 296 0 0 chrX 90441253 90441307 -76208989 - Lx8 LINE L1 -268 7205 7152 7 1275 258 273 15 29 chrX 90441296 90441364 -76208932 - Lx8 LINE L1 -250 7223 7157 7 1275 267 337 85 14 chrX 90441678 90441889 -76208407 + Charlie2b DNA MER1_type 2554 2779 -3 7 1275 249 325 150 5 chrX 90441951 90442158 -76208138 - Kanga2_a DNA Tc2 -405 483 247 7 1275 346 273 0 11 chrX 90442168 90442257 -76208039 + ID_B1 SINE B4 112 199 -25 7 1275 243 0 0 0 chrX 90442262 90442289 -76208007 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 1275 226 320 23 69 chrX 90442289 90442420 -76207876 + L1M2 LINE L1 5018 5142 -1001 7 1275 264 88 0 0 chrX 90442494 90442528 -76207768 + L1_Mm LINE L1 4843 4876 -1007 7 1275 2230 75 3 3 chrX 90442528 90442849 -76207447 - L1_Mus1 LINE L1 0 6567 6275 7 1275 2917 108 47 2 chrX 90442849 90443296 -76207000 + L1_Mm LINE L1 4862 5328 -555 7 1275 2264 66 17 111 chrX 90443296 90443656 -76206640 + L1_Mus1 LINE L1 6242 6567 0 7 1275 769 190 58 0 chrX 90443688 90443825 -76206471 + B1_Mus1 SINE Alu 4 148 0 7 1275 774 0 0 0 chrX 90443940 90444026 -76206270 + (GAA)n Simple_repeat Simple_repeat 1 86 0 7 1275 374 278 21 0 chrX 90444031 90444128 -76206168 - Kanga2_a DNA Tc2 -640 248 150 7 1275 245 296 0 53 chrX 90444337 90444412 -76205884 - ID4 SINE ID -11 72 2 7 1275 363 276 126 35 chrX 90444427 90444626 -76205670 + L1MC5 LINE L1 6654 6870 -1091 7 1275 1157 82 0 0 chrX 90444627 90444774 -76205522 + B1_Mus1 SINE Alu 2 148 0 7 1275 262 307 53 13 chrX 90444863 90444939 -76205357 + ID4_ SINE ID 1 79 -4 7 1275 720 240 60 102 chrX 90444946 90445280 -76205016 + L1MB4 LINE L1 5825 6144 -36 7 1275 1049 158 45 0 chrX 90445275 90445477 -76204819 - Lx9 LINE L1 -243 7401 7191 7 1275 403 172 256 56 chrX 90445473 90445633 -76204663 + Lx9 LINE L1 7419 7610 -34 7 1275 300 254 182 15 chrX 90445727 90445859 -76204437 + L1MC5 LINE L1 7759 7912 -49 7 1275 520 283 16 16 chrX 90445863 90445985 -76204311 + ID_B1 SINE B4 79 200 -24 7 1275 233 345 52 17 chrX 90445888 90446003 -76204293 - YREP_Mm Unknown Unknown -1516 296 178 7 1275 4354 52 0 0 chrX 90446003 90446575 -76203721 - L1Md_F2 LINE L1 -1269 4614 4043 7 1275 6960 58 0 3 chrX 90446574 90447509 -76202787 + L1Md_F2 LINE L1 4654 5585 -298 7 1275 8274 32 15 0 chrX 90447510 90448491 -76201805 + L1Md_F2 LINE L1 5587 6582 0 7 1275 324 200 0 74 chrX 90448766 90448847 -76201449 + ID4 SINE ID 6 80 -3 7 1275 221 344 0 16 chrX 90448900 90448962 -76201334 + B4A SINE B4 86 146 -146 7 1275 403 297 29 10 chrX 90448907 90449009 -76201287 + PB1D10 SINE Alu 8 111 -6 7 1275 426 117 16 12 chrX 90449299 90449382 -76200914 - ORR1D2 LTR MaLR 0 419 299 7 1275 1621 206 47 28 chrX 90449399 90449591 -76200705 - ORR1D1 LTR MaLR -8 366 181 7 1275 567 0 0 0 chrX 90449591 90449654 -76200642 + (GA)n Simple_repeat Simple_repeat 2 64 0 7 1275 1621 206 47 28 chrX 90449654 90449820 -76200476 - ORR1D1 LTR MaLR -194 180 1 7 1275 1575 203 7 0 chrX 90449820 90450114 -76200182 - MTD LTR MaLR -123 296 1 7 1275 1919 208 54 24 chrX 90450244 90450651 -76199645 - MTD LTR MaLR -8 411 1 7 1275 23 54 0 0 chrX 90451396 90451433 -76198863 + AT_rich Low_complexity Low_complexity 1 37 0 7 1275 445 302 8 17 chrX 90451465 90451583 -76198713 + PB1D10 SINE Alu 1 117 0 7 1275 553 293 34 6 chrX 90451829 90452004 -76198292 + B3A SINE B2 1 180 -18 7 1275 405 0 0 0 chrX 90452013 90452058 -76198238 + (TC)n Simple_repeat Simple_repeat 1 45 0 7 1275 477 0 0 0 chrX 90452058 90452110 -76198186 + (CA)n Simple_repeat Simple_repeat 1 53 0 7 1275 567 178 0 0 chrX 90452151 90452241 -76198055 + 4.5SRNA scRNA scRNA 1 90 -4 7 1275 12895 166 22 46 chrX 90452724 90453219 -76197077 + L1_Mur2 LINE L1 882 1378 -4499 7 1275 3359 50 33 2 chrX 90453219 90453640 -76196656 + L1_Mus1 LINE L1 6134 6567 0 7 1275 12895 140 26 101 chrX 90453640 90454774 -76195522 + L1_Mur2 LINE L1 1379 2494 -3382 7 1275 1129 104 0 0 chrX 90454774 90454928 -76195368 + B2_Mm2 SINE B2 1 154 -41 7 1275 423 0 0 0 chrX 90454929 90454976 -76195320 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 7 1275 12895 140 26 101 chrX 90454976 90455067 -76195229 + L1_Mur2 LINE L1 2496 2576 -3301 7 1275 1748 151 94 0 chrX 90455067 90455365 -76194931 + ORR1A3 LTR MaLR 1 326 0 7 1275 12895 140 26 101 chrX 90455365 90456885 -76193411 + L1_Mur2 LINE L1 2577 4048 -1829 7 1275 247 59 0 0 chrX 90456886 90456920 -76193376 - L1_Mur2 LINE L1 -1861 4016 3983 7 1275 5685 156 12 16 chrX 90456934 90457985 -76192311 + L1_Mur2 LINE L1 4789 5835 -42 7 1275 1166 62 0 7 chrX 90457985 90458132 -76192164 + B1_Mus2 SINE Alu 2 147 0 7 1275 5081 188 55 46 chrX 90458132 90459235 -76191061 + Lx4B LINE L1 5842 6981 -19 7 1275 391 321 9 0 chrX 90459351 90459460 -76190836 + PB1 SINE Alu 1 110 -17 7 1275 464 311 45 0 chrX 90459707 90459839 -76190457 - B1F SINE Alu -5 144 7 7 1275 614 222 263 0 chrX 90460111 90460282 -76190014 - B3 SINE B2 0 216 1 7 1275 26 30 0 0 chrX 90460300 90460333 -76189963 + AT_rich Low_complexity Low_complexity 1 33 0 7 1275 303 350 87 33 chrX 90460348 90460531 -76189765 + L1MC5 LINE L1 5588 5780 -2102 7 1275 350 331 73 34 chrX 90460705 90460883 -76189413 + L1MC5 LINE L1 7258 7442 -519 7 1275 8291 97 17 1 chrX 90460952 90462195 -76188101 + Lx3_Mus LINE L1 5729 6991 -18 7 1275 2153 58 123 0 chrX 90462243 90462551 -76187745 + ORR1A1 LTR MaLR 1 346 0 7 1275 900 166 202 0 chrX 90462551 90462823 -76187473 - ORR1D1 LTR MaLR -35 339 12 7 1275 365 239 68 76 chrX 90462836 90462954 -76187342 + PB1D10 SINE Alu 1 117 0 7 1275 831 279 10 16 chrX 90463051 90463244 -76187052 + B3 SINE B2 1 192 -24 7 1275 2322 70 0 28 chrX 90463260 90463585 -76186711 + L1Md_F2 LINE L1 6254 6569 -13 7 1275 6415 68 16 12 chrX 90463633 90465234 -76185062 + MusHAL1 LINE L1 7 1613 -1740 7 1275 583 154 42 8 chrX 90465402 90465520 -76184776 + RMER3D-int LTR ERVK 489 610 -2232 7 1275 451 137 2 85 chrX 90465536 90465652 -76184644 + RMER3D-int LTR ERVK 1022 1111 -1731 7 1275 7161 180 25 62 chrX 90465722 90467133 -76183163 + RMER3D-int LTR ERVK 1014 2371 -471 7 1275 1100 75 0 20 chrX 90467133 90467282 -76183014 + B1_Mm SINE Alu 2 147 0 7 1275 7161 180 25 62 chrX 90467282 90467704 -76182592 + RMER3D-int LTR ERVK 2372 2779 -63 7 1275 866 71 0 0 chrX 90467704 90467830 -76182466 + RLTR31_Mm LTR ERVK 217 342 -219 7 1275 740 226 109 123 chrX 90468004 90468452 -76181844 - RMER10A LTR ERVL 0 442 1 7 1275 993 189 174 54 chrX 90468504 90468762 -76181534 + MTC LTR MaLR 50 338 -83 7 1275 724 230 76 5 chrX 90468840 90469050 -76181246 + L1MA6 LINE L1 6059 6283 -17 7 1275 944 103 52 0 chrX 90469243 90469379 -76180917 - B1_Mm SINE Alu -2 145 3 7 1275 1125 144 124 0 chrX 90469544 90469745 -76180551 + URR1A DNA MER1_type 1 226 0 7 1275 242 208 0 0 chrX 90469779 90469827 -76180469 - MADE2 DNA Mariner -32 48 1 7 1275 418 308 100 35 chrX 90470010 90470329 -76179967 - Lx8 LINE L1 0 7473 7134 7 1275 928 236 33 9 chrX 90470560 90470770 -76179526 - B3 SINE B2 0 216 2 7 1275 270 343 62 36 chrX 90470937 90471049 -76179247 + MER58B DNA MER1_type 226 340 -1 7 1275 210 317 17 0 chrX 90471175 90471235 -76179061 + ID_B1 SINE B4 91 151 -73 8 1275 405 0 0 0 chrX 90471253 90471298 -76178998 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 8 1275 866 236 59 5 chrX 90471308 90471512 -76178784 + B3 SINE B2 2 216 0 8 1275 601 224 199 42 chrX 90471538 90471729 -76178567 + B4A SINE B4 6 226 -66 8 1275 359 254 28 14 chrX 90471841 90471913 -76178383 + RSINE1 SINE B4 2 74 -91 8 1275 22 35 0 0 chrX 90471955 90471984 -76178312 + AT_rich Low_complexity Low_complexity 1 29 0 8 1275 1135 286 56 23 chrX 90472060 90472453 -76177843 - Lx8 LINE L1 -796 6677 6272 7 1275 2471 55 62 0 chrX 90472532 90472840 -76177456 + ORR1A2 LTR MaLR 1 327 0 8 1275 5415 166 69 12 chrX 90472840 90473897 -76176399 + ORR1A2-int LTR MaLR 1 1120 -843 8 1275 2272 143 47 3 chrX 90473897 90473996 -76176300 - RMER2 LTR ERV1 0 567 461 8 1275 234 0 0 0 chrX 90473996 90474022 -76176274 + (CA)n Simple_repeat Simple_repeat 1 26 0 8 1275 2272 139 66 1 chrX 90474022 90474387 -76175909 - RMER2 LTR ERV1 -107 460 1 8 1275 5626 102 20 12 chrX 90474387 90475226 -76175070 + ORR1A2-int LTR MaLR 1118 1963 0 8 1275 2353 91 28 0 chrX 90475226 90475544 -76174752 + ORR1A2 LTR MaLR 1 327 0 8 1275 501 259 171 8 chrX 90475544 90475661 -76174635 - B3 SINE B2 -41 175 40 8 1275 559 274 62 76 chrX 90475766 90476206 -76174090 - Lx8 LINE L1 -1320 6153 5730 7 1275 1261 309 92 33 chrX 90476201 90476382 -76173914 + Lx8 LINE L1 6709 6882 -591 8 1275 1421 69 16 0 chrX 90476382 90476571 -76173725 + B2_Mm1t SINE B2 2 193 0 8 1275 1261 309 92 33 chrX 90476571 90477082 -76173214 + Lx8 LINE L1 6883 7442 -31 8 1275 21 57 0 0 chrX 90477085 90477120 -76173176 + AT_rich Low_complexity Low_complexity 1 35 0 8 1275 397 156 0 0 chrX 90477133 90477197 -76173099 - Lx8 LINE L1 -548 6925 6862 8 1275 1795 106 105 8 chrX 90477248 90477599 -76172697 + ORR1A2 LTR MaLR 18 394 0 8 1275 4264 125 8 8 chrX 90477904 90478660 -76171636 - Lx3C LINE L1 -1956 3930 3175 8 1275 2992 115 31 0 chrX 90478657 90479145 -76171151 + Lx3C LINE L1 3933 4435 -1442 8 1275 8440 49 20 0 chrX 90479139 90480245 -76170051 - L1_Mm LINE L1 -200 5683 4556 8 1275 3489 36 2 2 chrX 90480245 90480665 -76169631 + L1Md_F3 LINE L1 6165 6584 0 8 1275 8891 139 16 4 chrX 90480665 90483168 -76167128 + Lx3C LINE L1 4435 6974 -2 8 1275 27 29 0 0 chrX 90483168 90483202 -76167094 + AT_rich Low_complexity Low_complexity 1 34 0 8 1275 2354 192 127 25 chrX 90483331 90484091 -76166205 + ORR1A2-int LTR MaLR 1 1025 -938 8 1275 29962 94 13 5 chrX 90484095 90489227 -76161069 + L1Md_F2 LINE L1 407 5586 -297 8 1275 7969 50 2 2 chrX 90489227 90490209 -76160087 + L1Md_F2 LINE L1 5587 6568 -14 8 1275 6624 49 0 1 chrX 90490213 90491069 -76159227 + L1Md_F2 LINE L1 4732 5586 -297 8 1275 8060 41 5 3 chrX 90491069 90492061 -76158235 + L1Md_F2 LINE L1 5587 6580 -2 8 1275 1735 134 47 7 chrX 90492061 90492340 -76157956 + ORR1A2-int LTR MaLR 1674 1963 0 8 1275 2266 92 35 3 chrX 90492341 90492657 -76157639 + ORR1A2 LTR MaLR 2 327 0 8 1275 23 68 0 0 chrX 90492820 90492864 -76157432 + AT_rich Low_complexity Low_complexity 1 44 0 8 1275 871 136 35 21 chrX 90492918 90493061 -76157235 + B1_Mus2 SINE Alu 3 147 0 8 1275 362 217 0 67 chrX 90493072 90493161 -76157135 + PB1D9 SINE Alu 21 103 -17 8 1275 540 0 0 0 chrX 90493161 90493221 -76157075 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 8 1275 534 320 95 31 chrX 90493230 90493588 -76156708 + Lx8 LINE L1 7090 7470 -3 8 1275 1128 156 23 41 chrX 90493675 90493895 -76156401 + B3 SINE B2 1 216 0 8 1275 901 128 28 21 chrX 90495069 90495213 -76155083 - B1_Mur4 SINE Alu -4 146 2 8 1275 714 186 43 7 chrX 90495795 90495936 -76154360 + B1_Mus1 SINE Alu 3 148 0 8 1275 554 254 54 0 chrX 90496121 90496251 -76154045 - B1_Mur4 SINE Alu -5 145 9 8 1275 1018 219 5 32 chrX 90496367 90496584 -76153712 - B3 SINE B2 -5 211 1 8 1275 500 238 172 0 chrX 90496619 90496741 -76153555 + RSINE1 SINE B4 4 146 -19 8 1275 460 346 12 60 chrX 90497388 90497554 -76152742 - RSINE1 SINE B4 0 165 8 8 1275 315 0 0 0 chrX 90497556 90497591 -76152705 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8 1275 702 158 97 8 chrX 90497591 90497715 -76152581 - B1_Mus1 SINE Alu -9 141 5 8 1275 464 252 55 41 chrX 90497715 90497736 -76152560 - ID_B1 SINE B4 -9 215 69 8 1275 415 221 0 0 chrX 90497768 90497845 -76152451 - ID_B1 SINE B4 0 224 148 8 1275 652 259 85 17 chrX 90497897 90498074 -76152222 - ID_B1 SINE B4 -26 198 10 8 1275 924 168 98 16 chrX 90498191 90498385 -76151911 + B3 SINE B2 1 210 -6 8 1275 423 344 53 0 chrX 90498413 90498544 -76151752 + RSINE1 SINE B4 3 140 -25 8 1275 313 306 54 39 chrX 90500227 90500356 -76149940 + RSINE1 SINE B4 3 133 -32 1 1275 315 0 0 0 chrX 90500363 90500398 -76149898 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1275 441 271 22 37 chrX 90500711 90500845 -76149451 + RSINE1 SINE B4 32 163 -2 3 1275 400 288 45 0 chrX 90500908 90501019 -76149277 + PB1 SINE Alu 3 118 -9 4 1275 476 210 9 57 chrX 90501256 90501362 -76148934 + PB1 SINE Alu 27 127 0 5 1275 224 30 30 0 chrX 90501372 90501405 -76148891 + (TAAAAA)n Simple_repeat Simple_repeat 3 36 0 6 1275 22 0 0 0 chrX 90502247 90502269 -76148027 + AT_rich Low_complexity Low_complexity 1 22 0 7 1275 230 234 0 17 chrX 90503140 90503224 -76147072 - ID4_ SINE ID -33 119 39 8 1275 211 171 0 0 chrX 90503577 90503612 -76146684 - ID4 SINE ID -43 40 6 8 1275 1141 86 12 0 chrX 90503617 90503779 -76146517 - B2_Mm2 SINE B2 -31 164 1 9 1275 194 107 53 18 chrX 90503789 90503846 -76146450 + T-rich Low_complexity Low_complexity 2 60 0 1 1275 537 229 32 8 chrX 90503856 90503979 -76146317 - PB1 SINE Alu -1 126 1 1 1275 397 250 0 48 chrX 90504020 90504125 -76146171 + PB1D9 SINE Alu 15 114 -6 1 1275 575 234 0 0 chrX 90504447 90504554 -76145742 - ID_B1 SINE B4 -37 187 81 1 1275 297 306 20 10 chrX 90504748 90504847 -76145449 + PB1 SINE Alu 25 124 -3 1 1275 1920 200 130 73 chrX 90505011 90505415 -76144881 + RMER19C LTR ERVK 1 452 -159 1 1275 2998 59 28 18 chrX 90505415 90505811 -76144485 + MTB LTR MaLR 1 400 0 1 1275 1920 200 130 73 chrX 90505811 90505984 -76144312 + RMER19C LTR ERVK 453 611 0 1 1275 993 205 80 5 chrX 90506874 90507075 -76143221 - B3 SINE B2 0 216 1 1 1275 939 30 7 30 chrX 90507093 90507228 -76143068 - L1Md_F2 LINE L1 0 6582 6451 1 1275 324 282 12 0 chrX 90507228 90507313 -76142983 - PB1D10 SINE Alu -31 86 1 1 1275 381 249 40 18 chrX 90507315 90507470 -76142826 - L1MA4 LINE L1 -123 6174 6010 2 1275 367 342 64 40 chrX 90507601 90507972 -76142324 - ORR1E LTR MaLR 0 384 1 2 1275 284 149 0 0 chrX 90508051 90508098 -76142198 + B1_Mus2 SINE Alu 1 47 -100 2 1275 1108 208 78 7 chrX 90508088 90508359 -76141937 + ORR1D1 LTR MaLR 85 374 0 2 1275 280 167 37 0 chrX 90508359 90508413 -76141883 + B1_Mur2 SINE Alu 86 141 -8 2 1275 306 0 0 0 chrX 90508424 90508458 -76141838 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1275 820 285 37 34 chrX 90508477 90508746 -76141550 + B4A SINE B4 4 273 -19 2 1275 1172 232 95 65 chrX 90509378 90509631 -76140665 - MERVL_2A-int LTR ERVL -1124 4637 4368 2 1275 2720 70 30 0 chrX 90509631 90510004 -76140292 + L1_Mus3 LINE L1 6250 6633 -5 2 1275 1172 232 95 65 chrX 90510004 90510086 -76140210 - MERVL_2A-int LTR ERVL -1394 4367 4292 2 1275 492 141 48 24 chrX 90510086 90510197 -76140099 + ORR1A4 LTR MaLR 1 117 -250 2 1275 1398 162 18 11 chrX 90510197 90510466 -76139830 + ORR1A1 LTR MaLR 1 309 -61 3 1275 313 283 0 11 chrX 90510470 90510563 -76139733 - ERVL-B4-int LTR ERVL -4595 1119 1028 3 1275 318 345 94 37 chrX 90510589 90510833 -76139463 - MTEa LTR MaLR -117 262 5 3 1275 1580 252 90 13 chrX 90510865 90511374 -76138922 + Lx8 LINE L1 6815 7362 -111 3 1275 734 205 208 12 chrX 90511438 90511611 -76138685 - B3 SINE B2 -9 207 1 3 1275 484 240 136 7 chrX 90511836 90511983 -76138313 + MER5A DNA MER1_type 6 171 -18 3 1275 521 279 30 55 chrX 90512310 90512511 -76137785 - B3A SINE B2 -2 196 1 3 1275 188 67 0 32 chrX 90512544 90512575 -76137721 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 3 1275 367 156 52 0 chrX 90512576 90512653 -76137643 - B1_Mus2 SINE Alu -8 139 59 3 1275 811 143 71 0 chrX 90512697 90512837 -76137459 - B1_Mur4 SINE Alu 0 150 1 3 1275 472 280 56 0 chrX 90513110 90513235 -76137061 + B1F2 SINE Alu 1 132 -17 4 1275 255 31 0 0 chrX 90513268 90513300 -76136996 + (TTG)n Simple_repeat Simple_repeat 2 33 0 4 1275 1150 82 0 14 chrX 90513302 90513450 -76136846 - B1_Mus1 SINE Alu -1 147 2 4 1275 766 287 104 50 chrX 90513483 90513821 -76136475 - MLT1J2 LTR MaLR -18 430 75 4 1275 487 316 26 5 chrX 90513868 90514062 -76136234 - MLT1J2-int LTR MaLR -5 1382 1185 4 1275 338 198 120 11 chrX 90514386 90514478 -76135818 + ORR1E LTR MaLR 1 102 -257 4 1275 1192 57 6 0 chrX 90514553 90514710 -76135586 + B2_Mm2 SINE B2 1 158 -37 4 1275 240 35 0 0 chrX 90514710 90514739 -76135557 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 4 1275 482 208 171 17 chrX 90514943 90515124 -76135172 + Lx9 LINE L1 7430 7638 -6 4 1275 291 222 311 0 chrX 90515362 90515452 -76134844 + PB1D9 SINE Alu 3 120 0 4 1275 356 291 136 0 chrX 90515690 90515800 -76134496 - ID_B1 SINE B4 -92 132 8 4 1275 1170 82 42 52 chrX 90516117 90516310 -76133986 + B2_Mm2 SINE B2 1 191 -4 5 1275 327 383 99 30 chrX 90516310 90516743 -76133553 - MLT1J LTR MaLR -11 501 39 5 1275 233 306 93 39 chrX 90516807 90516936 -76133360 - MLT1H2 LTR MaLR -53 436 301 5 1275 1613 238 47 0 chrX 90517336 90517722 -76132574 - MTD LTR MaLR -15 404 1 5 1275 1200 49 7 0 chrX 90517830 90517974 -76132322 + B1_Mm SINE Alu 2 146 -1 5 1275 2387 122 3 3 chrX 90518065 90518444 -76131852 + Lx2 LINE L1 6272 6644 -353 5 1275 1401 126 45 0 chrX 90518434 90518657 -76131639 + Lx2 LINE L1 6765 6997 0 5 1275 386 308 51 51 chrX 90518667 90518845 -76131451 + B3 SINE B2 39 216 0 5 1275 2124 80 56 0 chrX 90519032 90519320 -76130976 + L1_Mus1 LINE L1 6264 6567 0 5 1275 26 74 0 0 chrX 90519408 90519462 -76130834 + AT_rich Low_complexity Low_complexity 1 54 0 5 1275 241 247 67 0 chrX 90520124 90520213 -76130083 - MIR SINE MIR -94 168 74 5 1275 389 267 19 9 chrX 90520238 90520344 -76129952 + ID_B1 SINE B4 117 223 -1 6 1275 328 286 10 39 chrX 90521958 90522060 -76128236 + ID_B1 SINE B4 100 198 -26 6 1275 424 202 162 0 chrX 90522161 90522260 -76128036 + ID_B1 SINE B4 93 207 -17 6 1275 244 303 0 15 chrX 90523564 90523631 -76126665 + GA-rich Low_complexity Low_complexity 5 70 0 6 1275 489 47 0 0 chrX 90524308 90524372 -76125924 + (GAAA)n Simple_repeat Simple_repeat 2 65 0 6 1275 654 161 77 0 chrX 90524374 90524504 -76125792 + B1_Mur1 SINE Alu 9 148 -1 6 1275 387 0 0 0 chrX 90524510 90524553 -76125743 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 1275 303 49 0 0 chrX 90525027 90525068 -76125228 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 6 1275 414 0 0 0 chrX 90525197 90525243 -76125053 + (TC)n Simple_repeat Simple_repeat 2 47 0 6 1275 573 15 0 0 chrX 90525243 90525308 -76124988 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 1275 24 0 0 0 chrX 90525339 90525363 -76124933 + GC_rich Low_complexity Low_complexity 1 24 0 7 1275 860 121 0 13 chrX 90526168 90526319 -76123977 + (GAAA)n Simple_repeat Simple_repeat 1 149 0 7 1275 204 158 0 0 chrX 90528232 90528270 -76122026 + GA-rich Low_complexity Low_complexity 2 39 0 7 1275 414 0 0 0 chrX 90529083 90529129 -76121167 + (TA)n Simple_repeat Simple_repeat 2 47 0 7 1275 21 0 0 0 chrX 90529493 90529514 -76120782 + AT_rich Low_complexity Low_complexity 1 21 0 7 1275 255 310 9 53 chrX 90533515 90533741 -76116555 + GA-rich Low_complexity Low_complexity 1 216 0 7 1275 288 91 0 0 chrX 90533982 90534026 -76116270 + (CGG)n Simple_repeat Simple_repeat 3 46 0 7 1275 186 193 0 0 chrX 90534351 90534408 -76115888 + GA-rich Low_complexity Low_complexity 2 58 0 7 1275 243 125 0 0 chrX 90534504 90534544 -76115752 + (CCG)n Simple_repeat Simple_repeat 1 40 0 7 1275 209 33 0 32 chrX 90536689 90536720 -76113576 + (AGGGGG)n Simple_repeat Simple_repeat 4 33 0 7 1275 22 56 0 0 chrX 90536995 90537031 -76113265 + AT_rich Low_complexity Low_complexity 1 36 0 8 1275 21 0 0 0 chrX 90538735 90538756 -76111540 + AT_rich Low_complexity Low_complexity 1 21 0 8 1275 332 265 32 30 chrX 90539557 90539711 -76110585 - MIRb SINE MIR -32 236 74 8 1275 756 0 0 0 chrX 90541928 90542012 -76108284 + (GA)n Simple_repeat Simple_repeat 1 84 0 8 1275 450 0 0 0 chrX 90544172 90544222 -76106074 + (GA)n Simple_repeat Simple_repeat 1 50 0 8 1275 23 78 0 0 chrX 90544682 90544733 -76105563 + GC_rich Low_complexity Low_complexity 1 51 0 8 1275 215 171 26 26 chrX 90547740 90547818 -76102478 + GA-rich Low_complexity Low_complexity 5 82 0 8 1275 751 186 50 7 chrX 90548432 90548573 -76101723 + B1_Mm SINE Alu 1 147 0 8 1275 344 324 49 0 chrX 90549085 90549215 -76101081 - B1F1 SINE Alu -1 149 4 8 1275 204 40 0 0 chrX 90549815 90549840 -76100456 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 1275 234 0 0 0 chrX 90550071 90550097 -76100199 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 9 1275 192 77 0 0 chrX 90551387 90551413 -76098883 + (CAGGC)n Simple_repeat Simple_repeat 2 27 0 9 1275 604 131 56 0 chrX 90558994 90559101 -76091195 - PB1D9 SINE Alu -1 119 7 9 1275 261 146 73 0 chrX 90559793 90559848 -76090448 + MER58A DNA MER1_type 51 109 -115 9 1275 368 275 49 35 chrX 90559973 90560103 -76090193 + PB1 SINE Alu 1 127 0 9 1275 381 312 0 0 chrX 90560342 90560438 -76089858 - PB1D7 SINE Alu -1 119 24 9 1275 187 115 0 55 chrX 90560497 90560552 -76089744 + A-rich Low_complexity Low_complexity 2 53 0 9 1275 277 238 78 141 chrX 90561948 90562101 -76088195 - L2a LINE L2 -5 3421 3225 9 1275 183 80 0 0 chrX 90562933 90562958 -76087338 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 9 1275 289 342 17 17 chrX 90566344 90566450 -76083846 + PB1D7 SINE Alu 1 108 -12 9 1275 315 0 0 0 chrX 90566450 90566485 -76083811 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 1 1275 289 342 17 17 chrX 90566485 90566497 -76083799 + PB1D7 SINE Alu 109 119 -1 9 1275 533 290 29 14 chrX 90566837 90566977 -76083319 + ID_B1 SINE B4 83 224 0 1 1275 232 241 58 122 chrX 90566860 90567016 -76083280 - YREP_Mm Unknown Unknown -1520 292 147 1 1275 226 271 0 0 chrX 90567021 90567069 -76083227 + ID_B1 SINE B4 122 169 -55 1 1275 223 278 69 0 chrX 90567069 90567093 -76083203 + PB1D10 SINE Alu 41 117 0 1 1275 261 328 0 15 chrX 90567126 90567194 -76083102 + ID4 SINE ID 14 80 -3 1 159 24817 140 46 9 chrX 90567260 90573041 -76077255 + L1_Mus4 LINE L1 627 6630 -6 1 1276 229 284 11 0 chrX 90573698 90573786 -76076510 + (CA)n Simple_repeat Simple_repeat 2 90 0 1 1276 270 336 83 28 chrX 90575002 90575146 -76075150 + MLT1K LTR MaLR 421 572 -23 1 1276 255 294 150 42 chrX 90575699 90575866 -76074430 + HAL1 LINE L1 1686 1870 -637 1 1276 386 248 18 9 chrX 90576201 90576315 -76073981 - Lx7 LINE L1 0 7696 7582 1 1276 481 317 57 38 chrX 90576347 90576557 -76073739 - ID_B1 SINE B4 -10 214 1 1 1276 3015 50 3 0 chrX 90576862 90577244 -76073052 + L1Md_F2 LINE L1 6200 6582 0 1 1276 1981 259 108 23 chrX 90577365 90578399 -76071897 - L1_Mur3 LINE L1 -3749 2131 1006 1 1276 261 256 0 0 chrX 90579291 90579334 -76070962 - ID4 SINE ID -31 52 10 1 1276 965 266 59 3 chrX 90579341 90579660 -76070636 - Charlie4a DNA MER1_type -91 417 80 1 1276 1033 262 96 22 chrX 90579696 90580051 -76070245 + Charlie1b DNA MER1_type 3 383 -140 1 1276 543 227 7 70 chrX 90580320 90580462 -76069834 - B1F SINE Alu -4 145 13 1 1276 587 213 76 133 chrX 90581139 90581350 -76068946 + B3 SINE B2 9 207 -9 1 1276 340 230 50 0 chrX 90581353 90581453 -76068843 + L1MA5 LINE L1 6194 6298 -2 1 1276 250 234 2 0 chrX 90582389 90582437 -76067859 - B1F SINE Alu -106 69 21 1 1276 7627 37 1 4 chrX 90582616 90583530 -76066766 + L1Md_F2 LINE L1 5647 6557 -25 1 1276 288 268 0 0 chrX 90583643 90583699 -76066597 - B3 SINE B2 -160 56 1 1 1276 4100 61 21 2 chrX 90584005 90584531 -76065765 - L1_Mus1 LINE L1 0 6567 6032 1 1276 343 279 119 2 chrX 90584549 90584743 -76065553 - MTD LTR MaLR -137 284 35 1 1276 246 62 0 0 chrX 90584745 90584777 -76065519 + (CACAC)n Simple_repeat Simple_repeat 1 32 0 1 1276 1403 77 16 0 chrX 90584811 90584993 -76065303 + B2_Mm2 SINE B2 2 186 -9 1 1276 235 176 0 0 chrX 90585191 90585225 -76065071 + B1_Mur4 SINE Alu 7 40 -110 1 1276 225 0 0 0 chrX 90585370 90585395 -76064901 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1276 514 216 8 62 chrX 90585413 90585542 -76064754 + MT2B LTR ERVL 242 489 -112 1 1276 739 143 67 0 chrX 90586669 90586788 -76063508 + B3 SINE B2 1 127 -89 1 1276 579 271 49 0 chrX 90587152 90587274 -76063022 + B3A SINE B2 2 129 -69 1 1276 306 50 0 0 chrX 90587291 90587331 -76062965 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1276 213 65 0 0 chrX 90587332 90587363 -76062933 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 1276 666 74 31 4 chrX 90587400 90587511 -76062785 - L1_Mus4 LINE L1 -529 6037 5927 1 1276 406 293 0 20 chrX 90587585 90587686 -76062610 + MER20 DNA MER1_type 121 219 0 1 1276 205 264 216 37 chrX 90587698 90587832 -76062464 + L2 LINE L2 2689 2846 -573 1 1276 3331 33 5 0 chrX 90587832 90588226 -76062070 + MTA_Mm LTR MaLR 1 396 0 1 1276 939 205 39 20 chrX 90588396 90588600 -76061696 + B3 SINE B2 1 208 -8 1 1276 542 179 37 0 chrX 90589149 90589283 -76061013 + Lx3_Mus LINE L1 6870 7008 -1 1 1276 5310 64 77 6 chrX 90589447 90590171 -76060125 - L1_Mus1 LINE L1 0 6567 5792 1 1276 257 297 198 0 chrX 90590520 90590611 -76059685 + B1_Mus1 SINE Alu 9 117 -31 1 1276 297 294 167 0 chrX 90590531 90590633 -76059663 + ID_B1 SINE B4 100 218 -6 1 1276 213 39 0 0 chrX 90590754 90590780 -76059516 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1276 26 30 0 0 chrX 90591497 90591530 -76058766 + AT_rich Low_complexity Low_complexity 1 33 0 1 1276 552 298 7 0 chrX 90591573 90591724 -76058572 + RSINE1 SINE B4 3 154 -11 1 1276 21 36 0 0 chrX 90592753 90592781 -76057515 + AT_rich Low_complexity Low_complexity 1 28 0 1 1276 19731 155 27 21 chrX 90593044 90594605 -76055691 + Lx3C LINE L1 894 2469 -3417 1 1276 977 47 94 0 chrX 90594605 90594732 -76055564 + B1_Mm SINE Alu 1 139 -8 1 1276 19731 148 25 26 chrX 90594732 90595766 -76054530 + Lx3C LINE L1 2470 3480 -2406 1 1276 666 0 0 0 chrX 90595766 90595840 -76054456 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 1 1276 19731 148 25 26 chrX 90595840 90597378 -76052918 + Lx3C LINE L1 3481 5028 -858 1 1276 7408 73 11 3 chrX 90597386 90598359 -76051937 + L1_Mus1 LINE L1 5587 6567 0 1 1276 654 13 0 0 chrX 90598390 90598465 -76051831 + (GGA)n Simple_repeat Simple_repeat 2 76 0 1 1276 5023 149 48 5 chrX 90598465 90599612 -76050684 + Lx3C LINE L1 5020 6228 -748 1 1276 425 165 143 10 chrX 90599618 90599716 -76050580 + Lx3C LINE L1 6811 6921 -55 1 1276 360 0 0 0 chrX 90599716 90599756 -76050540 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1276 265 246 192 24 chrX 90599756 90599782 -76050514 + Lx3C LINE L1 6927 6956 -25 1 1276 751 156 101 22 chrX 90599833 90599971 -76050325 - B1_Mur4 SINE Alu 0 150 2 1 1276 565 165 9 37 chrX 90600270 90600377 -76049919 + B1_Mur3 SINE Alu 40 143 -6 1 1276 262 134 15 15 chrX 90600380 90600448 -76049848 + (CAAAC)n Simple_repeat Simple_repeat 3 70 0 1 1276 7611 70 6 1 chrX 90601665 90602827 -76047469 - L1_Mus1 LINE L1 0 6567 5400 1 1276 239 257 135 0 chrX 90603311 90603385 -76046911 - MER3 DNA MER1_type -17 192 109 1 1276 315 287 19 47 chrX 90603430 90603536 -76046760 - MER3 DNA MER1_type -99 110 8 1 1276 307 305 70 113 chrX 90603915 90604144 -76046152 - MER102a DNA MER1_type -2077 351 133 1 1276 204 40 0 0 chrX 90604188 90604213 -76046083 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 1276 556 301 22 0 chrX 90604230 90604366 -76045930 - RSINE1 SINE B4 -22 143 5 1 1276 344 198 26 106 chrX 90604690 90604803 -76045493 + PB1D9 SINE Alu 17 120 0 1 1276 193 314 14 28 chrX 90606327 90606399 -76043897 - MER5B DNA MER1_type 0 178 108 1 1276 220 233 0 0 chrX 90606714 90606757 -76043539 + L2c LINE L2 3282 3324 -63 1 1276 250 282 42 0 chrX 90606941 90607012 -76043284 - MIR SINE MIR -6 256 183 1 1276 1399 70 21 0 chrX 90609561 90609747 -76040549 + B2_Mm2 SINE B2 1 190 -5 1 1276 349 244 0 0 chrX 90609958 90610036 -76040260 + ID4 SINE ID 2 79 -4 1 1276 3222 169 19 90 chrX 90610453 90611816 -76038480 + Lx5 LINE L1 4951 6119 -931 1 1276 782 219 19 12 chrX 90614751 90614913 -76035383 - MER5A1 DNA MER1_type -3 163 1 1 1276 261 239 239 0 chrX 90615088 90615176 -76035120 + Lx8 LINE L1 7058 7166 -307 1 1276 337 182 80 10 chrX 90615604 90615704 -76034592 - L1_Mur3 LINE L1 -3793 2087 1981 1 1276 552 275 0 0 chrX 90615733 90615853 -76034443 + MTD LTR MaLR 20 139 -280 1 1276 509 204 0 34 chrX 90615929 90616046 -76034250 + MTD LTR MaLR 307 419 0 1 1276 316 339 75 29 chrX 90616382 90616555 -76033741 + Lx7 LINE L1 6999 7179 -517 1 1276 526 236 70 38 chrX 90616564 90616749 -76033547 + Lx8 LINE L1 7255 7445 -28 1 1276 626 302 0 0 chrX 90616805 90616944 -76033352 + RSINE1 SINE B4 2 140 -25 1 1276 663 182 11 8 chrX 90619418 90619553 -76030743 - B1_Mur2 SINE Alu 0 149 12 1 1276 191 250 0 0 chrX 90622042 90622082 -76028214 - L2c LINE L2 -8 3379 3340 1 1276 22 0 0 0 chrX 90623333 90623355 -76026941 + AT_rich Low_complexity Low_complexity 1 22 0 1 1276 450 329 36 12 chrX 90624305 90624471 -76025825 + MER5B DNA MER1_type 9 178 0 1 1276 8305 84 17 5 chrX 90625009 90626189 -76024107 + Lx3_Mus LINE L1 5803 6996 -13 1 1276 189 0 0 0 chrX 90626190 90626211 -76024085 + (TAA)n Simple_repeat Simple_repeat 1 21 0 1 1276 450 226 0 23 chrX 90626241 90626327 -76023969 + RSINE1 SINE B4 46 129 -36 1 1276 180 0 0 0 chrX 90627760 90627780 -76022516 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1 1276 818 172 254 0 chrX 90628061 90628230 -76022066 + B3 SINE B2 2 213 -3 1 1276 22 0 0 0 chrX 90628576 90628598 -76021698 + AT_rich Low_complexity Low_complexity 1 22 0 1 1276 769 201 0 45 chrX 90629418 90629574 -76020722 + B1_Mur3 SINE Alu 1 149 0 1 1276 393 274 113 57 chrX 90629636 90629760 -76020536 - RSINE1 SINE B4 -8 157 27 1 1276 355 258 109 31 chrX 90629858 90629986 -76020310 - B1F1 SINE Alu -11 138 1 1 1276 25 0 0 0 chrX 90630096 90630121 -76020175 + AT_rich Low_complexity Low_complexity 1 25 0 1 1276 205 320 130 34 chrX 90630564 90630724 -76019572 - MIRb SINE MIR -75 193 4 1 1276 212 167 0 0 chrX 90630755 90630797 -76019499 + T-rich Low_complexity Low_complexity 1 42 0 1 1276 1129 95 0 0 chrX 90631220 90631367 -76018929 + B1_Mus2 SINE Alu 1 147 0 1 1276 341 314 134 8 chrX 90631374 90631493 -76018803 + RSINE1 SINE B4 3 136 -29 1 1276 354 80 0 0 chrX 90631534 90631584 -76018712 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 1 1276 185 231 0 0 chrX 90631859 90631898 -76018398 - MIRc SINE MIR -124 144 106 1 1276 222 328 62 62 chrX 90631903 90632033 -76018263 + MIRb SINE MIR 135 264 -4 1 1276 3885 94 0 19 chrX 90632178 90632743 -76017553 + L1Md_F2 LINE L1 6029 6582 0 1 1276 295 279 344 0 chrX 90633091 90633245 -76017051 + MIR SINE MIR 36 242 -20 1 1276 183 300 0 0 chrX 90633551 90633601 -76016695 + MIRc SINE MIR 94 143 -125 1 1276 838 247 54 50 chrX 90635011 90635271 -76015025 + Lx6 LINE L1 7184 7444 -16 1 1276 2322 89 61 3 chrX 90635643 90635987 -76014309 + L1_Mus3 LINE L1 6254 6615 -23 1 1276 1094 95 7 0 chrX 90635987 90636134 -76014162 + B1_Mus1 SINE Alu 1 148 0 2 1276 2322 89 61 3 chrX 90636134 90636149 -76014147 + L1_Mus3 LINE L1 6616 6633 -5 1 1276 198 0 0 0 chrX 90636156 90636178 -76014118 + (GGAA)n Simple_repeat Simple_repeat 3 24 0 2 1276 707 100 9 0 chrX 90636180 90636290 -76014006 + (GA)n Simple_repeat Simple_repeat 1 111 0 2 1276 8123 98 9 26 chrX 90636464 90638434 -76011862 + L1_Mus2 LINE L1 4613 6566 0 2 1276 301 327 18 0 chrX 90638546 90638659 -76011637 - PB1D10 SINE Alu 0 117 3 2 1276 278 236 175 35 chrX 90639938 90640109 -76010187 - L1ME1 LINE L1 -63 6116 5922 2 1276 484 301 73 8 chrX 90640111 90640235 -76010061 + RSINE1 SINE B4 5 136 -29 2 1276 267 265 33 12 chrX 90640278 90640385 -76009911 - L1ME1 LINE L1 -424 5935 5827 2 1276 300 212 78 26 chrX 90640408 90640524 -76009772 - L1ME1 LINE L1 -872 5274 5153 2 1276 243 167 0 36 chrX 90640595 90640651 -76009645 - L1ME1 LINE L1 -1239 4907 4854 2 1276 3958 107 21 31 chrX 90641242 90641860 -76008436 - Lx4A LINE L1 -450 6608 5997 2 1276 2992 141 40 2 chrX 90641860 90642336 -76007960 + Lx4A LINE L1 6562 7055 -3 2 1276 23 33 0 0 chrX 90642336 90642366 -76007930 + AT_rich Low_complexity Low_complexity 1 30 0 2 1276 724 268 119 34 chrX 90642547 90642783 -76007513 - B4 SINE B4 -30 262 7 2 1276 314 298 157 4 chrX 90643236 90643465 -76006831 - L1MD2 LINE L1 -3611 2933 2670 2 1276 234 91 0 0 chrX 90643465 90643498 -76006798 + (TTTC)n Simple_repeat Simple_repeat 2 34 0 2 1276 339 260 65 0 chrX 90643500 90643577 -76006719 - B1_Mur3 SINE Alu -67 82 1 2 1276 3020 100 47 2 chrX 90643652 90644102 -76006194 - Lx4B LINE L1 -229 5648 5179 2 1276 8113 133 52 16 chrX 90644093 90645441 -76004855 + Lx4B LINE L1 5652 7047 -11 2 1276 285 261 146 78 chrX 90646018 90646405 -76003891 - L1MD2 LINE L1 -4729 1911 1533 2 1276 2768 32 0 0 chrX 90646405 90646743 -76003553 + ORR1A0 LTR MaLR 1 338 -8 2 1276 288 248 101 0 chrX 90646920 90647029 -76003267 - L1MD2 LINE L1 -5308 1332 1213 2 1276 1819 165 134 8 chrX 90647065 90647437 -76002859 + RMER4B LTR ERVK 17 435 -150 2 1276 283 228 215 0 chrX 90647428 90647507 -76002789 + RMER4B LTR ERVK 465 528 -57 2 1276 200 206 0 0 chrX 90647518 90647552 -76002744 + polypyrimidine Low_complexity Low_complexity 1 34 0 2 1276 443 237 0 0 chrX 90647701 90647777 -76002519 + ID4_ SINE ID 5 80 -3 2 1276 310 340 128 30 chrX 90647793 90647996 -76002300 - L1MD2 LINE L1 -5629 918 696 2 1276 234 323 51 101 chrX 90648032 90648095 -76002201 - ID_B1 SINE B4 0 224 163 2 1276 825 248 59 0 chrX 90648095 90648297 -76001999 + B3 SINE B2 3 216 0 2 1276 234 323 51 101 chrX 90648297 90648371 -76001925 - ID_B1 SINE B4 -62 162 94 2 1276 297 343 28 35 chrX 90649254 90649396 -76000900 + Tigger9b DNA MER2_type 8 148 -476 2 1276 927 309 14 52 chrX 90649403 90649582 -76000714 + Tigger9b DNA MER2_type 124 290 -334 2 1276 2167 93 63 48 chrX 90649582 90649933 -76000363 - L1Md_F2 LINE L1 -1 6581 6226 2 1276 927 309 14 52 chrX 90649933 90650118 -76000178 + Tigger9b DNA MER2_type 291 474 -150 2 1276 282 343 88 15 chrX 90650323 90650459 -75999837 - B1F SINE Alu -3 146 1 2 1276 945 135 73 68 chrX 90650466 90650657 -75999639 - B2_Mm2 SINE B2 -2 193 2 2 1276 260 197 0 32 chrX 90650681 90650744 -75999552 + (TTTA)n Simple_repeat Simple_repeat 1 61 0 2 1276 597 130 0 11 chrX 90650744 90650837 -75999459 - B2_Mm2 SINE B2 -18 177 86 2 1276 219 359 11 0 chrX 90651586 90651678 -75998618 + L2a LINE L2 2602 2694 -725 2 1276 542 346 115 34 chrX 90651688 90652210 -75998086 + L2a LINE L2 2855 3412 -14 2 1276 199 311 16 16 chrX 90655951 90656013 -75994283 - MIR3 SINE MIR -54 154 93 2 1276 843 236 24 19 chrX 90656559 90656771 -75993525 + B3 SINE B2 1 213 -3 2 1276 254 292 20 30 chrX 90656821 90656920 -75993376 - MER20 DNA MER1_type -4 215 118 2 1276 191 325 184 48 chrX 90657613 90657820 -75992476 + L3 LINE CR1 3368 3602 -887 2 1276 624 273 57 31 chrX 90658093 90658286 -75992010 - B3A SINE B2 0 198 1 2 1276 711 99 168 14 chrX 90658461 90658604 -75991692 - Lx LINE L1 -4 6650 6486 2 1276 720 306 107 49 chrX 90658706 90659097 -75991199 + MLT1C LTR MaLR 1 414 -53 2 1276 714 269 99 16 chrX 90659673 90659987 -75990309 + L1MB5 LINE L1 5793 6132 -42 2 1276 2463 76 18 0 chrX 90660566 90660895 -75989401 - Lx LINE L1 -541 6113 5779 2 1276 3432 84 49 38 chrX 90660896 90661428 -75988868 + Lx LINE L1 6112 6649 -5 2 1276 387 347 0 0 chrX 90661661 90661759 -75988537 - PB1D7 SINE Alu -1 119 22 2 1276 21 0 0 0 chrX 90661980 90662001 -75988295 + AT_rich Low_complexity Low_complexity 1 21 0 2 1276 463 304 7 1 chrX 90662586 90662774 -75987522 - L1MA4 LINE L1 -379 5921 5720 2 1276 412 302 31 13 chrX 90662853 90662971 -75987325 - B1F1 SINE Alu -5 115 2 2 1276 544 213 99 30 chrX 90663068 90663199 -75987097 - B1_Mur3 SINE Alu -8 141 2 2 1276 429 20 0 0 chrX 90663914 90663964 -75986332 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1276 768 139 0 0 chrX 90663964 90664086 -75986210 + URR1B DNA MER1_type 104 225 0 2 1276 641 176 145 0 chrX 90664349 90664480 -75985816 + B1_Mur4 SINE Alu 1 150 0 2 1276 285 51 0 0 chrX 90665565 90665604 -75984692 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1276 1049 52 15 7 chrX 90665604 90665740 -75984556 - B1_Mm SINE Alu -10 137 1 2 1276 1003 200 80 5 chrX 90666188 90666389 -75983907 + B3 SINE B2 1 216 0 2 1276 253 338 86 49 chrX 90666568 90666730 -75983566 + MIR SINE MIR 79 246 -16 2 1276 194 298 214 0 chrX 90667223 90667307 -75982989 - L2c LINE L2 -236 3151 3050 2 1276 341 316 0 20 chrX 90668065 90668165 -75982131 - PB1D10 SINE Alu -19 98 1 2 1276 22 35 0 0 chrX 90668217 90668246 -75982050 + AT_rich Low_complexity Low_complexity 1 29 0 2 1276 293 191 274 0 chrX 90668251 90668335 -75981961 - PB1D10 SINE Alu -8 109 3 2 1276 281 152 167 0 chrX 90670455 90670521 -75979775 + MIRb SINE MIR 116 192 -76 2 1276 900 125 7 0 chrX 90670586 90670730 -75979566 - L1_Mus2 LINE L1 -36 6530 6386 2 1276 430 258 75 0 chrX 90670735 90670828 -75979468 + B1_Mur1 SINE Alu 24 123 -26 2 1276 204 125 0 0 chrX 90670835 90670867 -75979429 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 2 1276 233 180 16 16 chrX 90673597 90673659 -75976637 + T-rich Low_complexity Low_complexity 2 63 0 2 1276 395 282 153 6 chrX 90677043 90677126 -75973170 - MER5A DNA MER1_type -7 182 82 2 1276 387 0 0 0 chrX 90677126 90677169 -75973127 + (GGCTG)n Simple_repeat Simple_repeat 4 46 0 2 1276 395 282 153 6 chrX 90677169 90677242 -75973054 - MER5A DNA MER1_type -108 81 4 2 1276 193 265 0 39 chrX 90677309 90677360 -75972936 - MER5B DNA MER1_type -129 49 1 2 1276 395 239 0 32 chrX 90677958 90678053 -75972243 + MER33 DNA MER1_type 7 98 -226 2 1276 227 279 112 12 chrX 90678181 90678261 -75972035 + ID SINE ID 1 88 -136 2 1276 719 210 128 32 chrX 90678655 90678842 -75971454 - B3 SINE B2 -9 207 3 2 1276 485 239 75 0 chrX 90678931 90679065 -75971231 + L1MC1 LINE L1 6007 6150 -183 2 1276 22 56 0 0 chrX 90679679 90679715 -75970581 + AT_rich Low_complexity Low_complexity 1 36 0 2 1276 478 331 24 8 chrX 90680348 90680473 -75969823 - B1F SINE Alu -21 128 2 2 1276 318 219 52 4 chrX 90680559 90680671 -75969625 + L1MC1 LINE L1 6003 6123 -221 2 1276 221 320 58 10 chrX 90680686 90680790 -75969506 + MER5A DNA MER1_type 57 165 -24 2 1276 1226 41 0 0 chrX 90682500 90682647 -75967649 - B1_Mus2 SINE Alu 0 147 1 2 1276 444 287 19 0 chrX 90686289 90686397 -75963899 - B1F SINE Alu -37 112 3 2 1276 5988 91 32 0 chrX 90689852 90690723 -75959573 - L1_Mm LINE L1 -1364 4519 3621 2 1276 10119 92 40 19 chrX 90690722 90692917 -75957379 + L1_Mus2 LINE L1 4351 6566 0 2 1276 828 65 171 0 chrX 90693730 90693853 -75956443 + B1_Mus1 SINE Alu 5 148 0 2 1276 251 50 50 0 chrX 90693855 90693895 -75956401 + (GAAAA)n Simple_repeat Simple_repeat 3 44 0 2 1276 555 280 48 0 chrX 90695003 90695128 -75955168 + B1_Mur1 SINE Alu 3 133 -16 2 1276 369 0 0 0 chrX 90695129 90695170 -75955126 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1276 468 291 179 9 chrX 90695422 90695703 -75954593 + L1MD LINE L1 4412 4761 -1385 2 1276 4197 165 65 88 chrX 90695703 90696626 -75953670 + RMER19B LTR ERVK 1 902 0 2 1276 468 291 179 9 chrX 90696626 90696764 -75953532 + L1MD LINE L1 4762 4901 -1245 2 1276 225 196 0 0 chrX 90696831 90696877 -75953419 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1276 236 268 0 11 chrX 90696896 90696983 -75953313 + L1MD LINE L1 5106 5191 -955 2 1276 217 237 22 156 chrX 90697003 90697093 -75953203 + B4 SINE B4 10 87 -205 2 1276 981 137 7 0 chrX 90697172 90697318 -75952978 - B1_Mur2 SINE Alu 0 149 3 2 1276 515 217 8 0 chrX 90697342 90697462 -75952834 + L1MD LINE L1 5203 5323 -823 2 1276 1778 189 12 12 chrX 90697496 90697829 -75952467 + ORR1D1 LTR MaLR 42 374 0 2 1276 1055 284 77 7 chrX 90697833 90698251 -75952045 + L1MC3 LINE L1 5371 5817 -362 2 1276 235 176 87 14 chrX 90698268 90698337 -75951959 + L1MC3 LINE L1 5883 5956 -1829 2 1276 29 0 0 0 chrX 90699043 90699072 -75951224 + AT_rich Low_complexity Low_complexity 1 29 0 2 1276 362 292 112 76 chrX 90699082 90699438 -75950858 - L1ME4a LINE L1 -75 6049 5681 2 1276 616 336 49 15 chrX 90699514 90699780 -75950516 - B4A SINE B4 -16 276 2 2 1276 2050 275 138 21 chrX 90699867 90700643 -75949653 + Charlie1a DNA MER1_type 102 968 -487 2 1276 1081 263 3 27 chrX 90700645 90700938 -75949358 + B4A SINE B4 3 288 -4 2 1277 390 21 0 0 chrX 90703647 90703694 -75946602 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1277 455 0 18 0 chrX 90703793 90703848 -75946448 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1277 22 0 0 0 chrX 90704275 90704297 -75945999 + AT_rich Low_complexity Low_complexity 1 22 0 2 1277 465 260 70 47 chrX 90706346 90706475 -75943821 + RSINE1 SINE B4 3 134 -31 2 1277 648 0 0 0 chrX 90706495 90706567 -75943729 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 2 1277 279 71 0 0 chrX 90708140 90708182 -75942114 + (A)n Simple_repeat Simple_repeat 1 42 0 2 1277 307 317 71 24 chrX 90709700 90709826 -75940470 + MIRb SINE MIR 121 252 -16 2 1277 22 0 0 0 chrX 90709970 90709992 -75940304 + AT_rich Low_complexity Low_complexity 1 22 0 2 1277 610 275 59 12 chrX 90712538 90712792 -75937504 + L1ME2 LINE L1 5798 6063 -101 2 1277 3364 73 30 11 chrX 90713388 90713847 -75936449 - L1Md_F2 LINE L1 -12 6570 6103 2 1277 236 303 0 0 chrX 90714458 90714524 -75935772 - ID4 SINE ID -16 67 2 2 1277 877 198 124 9 chrX 90714574 90714872 -75935424 + ORR1D1 LTR MaLR 3 367 -7 3 1277 324 292 82 20 chrX 90714872 90714970 -75935326 - PB1D10 SINE Alu -11 106 3 3 1277 180 246 83 42 chrX 90715162 90715234 -75935062 + L2a LINE L2 3348 3422 -4 3 1277 432 259 0 25 chrX 90715643 90715762 -75934534 - PB1D10 SINE Alu 0 117 2 3 1277 379 161 94 31 chrX 90717440 90717536 -75932760 + RLTR47_MM LTR ERV1 343 444 -88 3 1277 189 0 0 0 chrX 90717549 90717570 -75932726 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 3 1277 450 293 103 58 chrX 90717928 90718171 -75932125 + MIRb SINE MIR 5 258 -10 3 1277 188 352 0 0 chrX 90718575 90718629 -75931667 - L2b LINE L2 -18 3357 3304 3 1277 2667 68 0 3 chrX 90720198 90720552 -75929744 - L1Md_F2 LINE L1 0 6582 6230 3 1277 386 241 83 33 chrX 90720609 90720729 -75929567 + MTEb LTR MaLR 251 376 -3 3 1277 387 244 66 66 chrX 90721544 90721680 -75928616 - ID_B1 SINE B4 -1 223 88 3 1277 3425 64 31 2 chrX 90721800 90722257 -75928039 + Lx3_Mus LINE L1 6538 7007 -2 3 1277 22 0 0 0 chrX 90722257 90722279 -75928017 + AT_rich Low_complexity Low_complexity 1 22 0 3 1277 1017 207 29 5 chrX 90722847 90723056 -75927240 + B3 SINE B2 3 216 0 3 1277 343 279 0 0 chrX 90724765 90724844 -75925452 - ID4 SINE ID -2 81 3 3 1277 1391 65 5 16 chrX 90724984 90725171 -75925125 - B2_Mm1t SINE B2 -7 186 2 3 1277 979 261 19 14 chrX 90725380 90725590 -75924706 - B3 SINE B2 0 216 6 3 1277 494 264 90 42 chrX 90726490 90726656 -75923640 + Charlie1a DNA MER1_type 123 296 -1159 3 1277 518 291 15 7 chrX 90726673 90726808 -75923488 - B1F SINE Alu -12 137 2 3 1277 1025 284 117 45 chrX 90726808 90727380 -75922916 + Charlie1a DNA MER1_type 296 908 -547 3 1277 554 315 70 68 chrX 90727482 90727755 -75922541 + Charlie1a DNA MER1_type 908 1189 -266 3 1277 464 235 224 0 chrX 90727755 90727925 -75922371 + B3 SINE B2 1 208 -8 3 1277 554 315 70 68 chrX 90727925 90728049 -75922247 + Charlie1a DNA MER1_type 1190 1306 -149 3 1277 435 83 0 0 chrX 90728464 90728524 -75921772 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 1277 451 328 0 8 chrX 90728550 90728667 -75921629 + RSINE1 SINE B4 50 165 0 3 1277 1213 71 23 17 chrX 90728747 90728920 -75921376 + B2_Mm2 SINE B2 20 193 -2 3 1277 231 264 79 139 chrX 90729472 90729573 -75920723 - PB1D9 SINE Alu -20 100 6 3 1277 541 234 13 113 chrX 90729660 90729819 -75920477 + B4 SINE B4 81 223 -69 3 1277 770 308 56 24 chrX 90729823 90730036 -75920260 + B4 SINE B4 1 220 -72 3 1277 587 26 13 0 chrX 90730067 90730144 -75920152 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 1277 3333 143 19 9 chrX 90730239 90730777 -75919519 + Lx4A LINE L1 6505 7047 -11 3 1277 407 168 11 0 chrX 90730785 90730880 -75919416 + GA-rich Low_complexity Low_complexity 2 97 0 3 1277 279 0 0 0 chrX 90730882 90730913 -75919383 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 3 1277 660 313 17 6 chrX 90731131 90731311 -75918985 + B3 SINE B2 5 186 -30 3 1277 460 235 176 0 chrX 90731541 90731660 -75918636 + B1F2 SINE Alu 2 141 -8 3 1277 216 0 0 0 chrX 90732388 90732412 -75917884 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 3 1277 1135 81 0 0 chrX 90732441 90732590 -75917706 + B2_Mm2 SINE B2 2 150 -45 3 1277 231 88 0 0 chrX 90732592 90732626 -75917670 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1277 677 264 91 20 chrX 90733706 90733903 -75916393 - B3 SINE B2 -5 211 1 3 1277 851 188 86 86 chrX 90734234 90734275 -75916021 + B3 SINE B2 1 34 -182 3 1277 1197 42 0 0 chrX 90734275 90734418 -75915878 + B1_Mus1 SINE Alu 2 144 -4 3 1277 851 188 86 86 chrX 90734418 90734585 -75915711 + B3 SINE B2 35 209 -7 3 1277 760 196 249 0 chrX 90735830 90736003 -75914293 - B3 SINE B2 0 216 1 3 1277 459 314 43 24 chrX 90736493 90736792 -75913504 + L1MA4 LINE L1 5633 5936 -355 3 1277 255 308 53 53 chrX 90737020 90737133 -75913163 + B1_Mus1 SINE Alu 29 141 -7 3 1277 191 246 135 14 chrX 90738943 90739017 -75911279 + L3 LINE CR1 2040 2122 -2367 3 1277 287 302 136 30 chrX 90739601 90739799 -75910497 - MIR SINE MIR -31 231 13 3 1277 298 278 31 0 chrX 90741752 90741849 -75908447 - L1MC LINE L1 -2080 5802 5703 3 1277 22 0 0 0 chrX 90743392 90743414 -75906882 + AT_rich Low_complexity Low_complexity 1 22 0 3 1277 1190 77 12 0 chrX 90744664 90744834 -75905462 + (TCTCCC)n Simple_repeat Simple_repeat 4 175 0 3 1277 737 33 0 0 chrX 90744834 90744924 -75905372 - B1_Mm SINE Alu -14 133 44 3 1277 322 188 71 48 chrX 90744863 90744947 -75905349 - RLTR25B LTR ERVK -519 509 424 3 1277 26 0 0 0 chrX 90745177 90745203 -75905093 + AT_rich Low_complexity Low_complexity 1 26 0 3 1277 1006 62 23 0 chrX 90745207 90745337 -75904959 - B1_Mm SINE Alu -13 134 2 3 1277 397 211 20 82 chrX 90745388 90745486 -75904810 - MER20 DNA MER1_type 0 219 128 3 1277 511 175 51 10 chrX 90745883 90745981 -75904315 - B1_Mur1 SINE Alu -13 136 35 3 1277 1017 303 78 58 chrX 90746074 90746473 -75903823 + MLT2D LTR ERVL 1 407 -7 3 1277 354 251 18 0 chrX 90749086 90749168 -75901128 - ID4 SINE ID -53 99 15 3 1277 391 340 6 45 chrX 90750513 90750670 -75899626 + RSINE1 SINE B4 1 151 -14 3 1277 527 271 0 54 chrX 90751430 90751578 -75898718 + B1F SINE Alu 3 142 -7 3 1277 1295 66 0 47 chrX 90751845 90752009 -75898287 + B2_Mm2 SINE B2 1 161 -34 3 1277 225 0 0 0 chrX 90752009 90752034 -75898262 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 3 1277 1295 66 0 47 chrX 90752034 90752061 -75898235 + B2_Mm2 SINE B2 162 183 -12 3 1277 270 0 0 0 chrX 90752452 90752482 -75897814 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 3 1277 390 302 42 0 chrX 90753310 90753406 -75896890 + PB1D9 SINE Alu 2 101 -19 3 1277 1995 89 0 31 chrX 90753752 90754041 -75896255 + L1Md_F2 LINE L1 6303 6582 0 3 1277 968 230 36 5 chrX 90754510 90754599 -75895697 - RMER19B LTR ERVK -570 332 237 3 1277 396 0 0 0 chrX 90754599 90754643 -75895653 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1277 968 230 36 5 chrX 90754643 90754776 -75895520 - RMER19B LTR ERVK -666 236 104 3 1277 7467 75 10 13 chrX 90754776 90756135 -75894161 - L1_Mus1 LINE L1 -1 6566 5202 3 1277 1703 42 5 0 chrX 90756135 90756347 -75893949 + L1Md_T LINE L1 6369 6581 -1 3 1277 5069 103 9 29 chrX 90756347 90756441 -75893855 - L1_Mus1 LINE L1 -682 5201 5129 3 1277 870 172 5 74 chrX 90756445 90756690 -75893606 - RMER19B LTR ERVK -398 213 1 3 1277 260 321 106 14 chrX 90756732 90756874 -75893422 + LTR33 LTR ERVL 361 515 0 3 1277 401 191 0 0 chrX 90757378 90757446 -75892850 + RLTR15 LTR ERVK 292 359 0 3 1277 1145 119 27 16 chrX 90757538 90757725 -75892571 + L1_Mus2 LINE L1 6377 6565 -1 3 1277 230 225 0 101 chrX 90759356 90759435 -75890861 + B1F1 SINE Alu 79 149 0 3 1277 390 244 8 25 chrX 90760545 90760663 -75889633 - L1M3 LINE L1 -1609 4534 4419 3 1277 222 378 0 0 chrX 90760674 90760748 -75889548 - ID4_ SINE ID -1 82 9 3 1277 1749 262 88 37 chrX 90760866 90761563 -75888733 - L1M3 LINE L1 -1782 4358 3627 3 1277 946 279 17 41 chrX 90761590 90761881 -75888415 + B4A SINE B4 1 284 -8 3 1277 238 254 30 0 chrX 90761969 90762036 -75888260 + L1M3 LINE L1 4550 4618 -1522 3 1277 781 238 137 40 chrX 90762058 90762430 -75887866 + L1M3 LINE L1 4834 5241 -899 3 1277 690 161 188 0 chrX 90762459 90762645 -75887651 + Lx9 LINE L1 7423 7643 -1 3 1277 990 249 104 16 chrX 90762639 90763063 -75887233 + L1M3 LINE L1 5291 5751 -561 3 1277 307 135 0 0 chrX 90763066 90763118 -75887178 + L1M2 LINE L1 5425 5476 -824 3 1277 321 234 56 0 chrX 90763184 90763291 -75887005 + L1M2 LINE L1 5463 5575 -725 3 1277 1269 14 0 0 chrX 90764037 90764183 -75886113 + B1_Mus2 SINE Alu 2 147 0 3 1277 180 77 0 0 chrX 90764183 90764209 -75886087 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1277 367 288 59 8 chrX 90764328 90764447 -75885849 + MER3 DNA MER1_type 73 197 -12 3 1277 414 242 139 8 chrX 90764420 90764549 -75885747 + MER3 DNA MER1_type 55 200 -9 3 1277 642 150 83 28 chrX 90764755 90764899 -75885397 - URR1B DNA MER1_type -6 219 68 3 1277 353 248 143 38 chrX 90764951 90765056 -75885240 + PB1D10 SINE Alu 1 116 -1 3 1277 1576 232 42 14 chrX 90765382 90765736 -75884560 - ORR1D2 LTR MaLR -2 368 5 3 1277 761 264 195 0 chrX 90766765 90767011 -75883285 + MamRep605 Unknown Unknown 432 725 -151 3 1277 277 323 47 39 chrX 90767688 90767817 -75882479 + L1MEb LINE L1 155 284 -5852 3 1277 654 256 109 23 chrX 90767899 90768254 -75882042 + L1MEb LINE L1 3265 3690 -2456 3 1277 757 236 22 38 chrX 90768254 90768439 -75881857 + B3A SINE B2 2 183 -15 3 1277 457 273 164 58 chrX 90768439 90768682 -75881614 + L1MEb LINE L1 3691 3926 -2220 3 1277 576 292 0 49 chrX 90768682 90768887 -75881409 + B3A SINE B2 1 195 -3 3 1277 3271 35 2 12 chrX 90768904 90769304 -75880992 - MTA_Mm LTR MaLR 0 396 1 3 1277 7182 73 31 69 chrX 90769304 90770446 -75879850 - MTA_Mm-int LTR MaLR 0 1098 1 3 1277 3240 38 8 2 chrX 90770446 90770840 -75879456 - MTA_Mm LTR MaLR 0 396 1 3 1277 23 33 0 0 chrX 90770864 90770894 -75879402 + AT_rich Low_complexity Low_complexity 1 30 0 3 1277 226 268 107 53 chrX 90770932 90770951 -75879345 + MT2B2 LTR ERVL 159 237 -347 3 1277 244 268 107 0 chrX 90770951 90771007 -75879289 + PB1D10 SINE Alu 18 79 -38 3 1277 302 291 17 17 chrX 90771032 90771151 -75879145 + L1M4 LINE L1 4000 4118 -2028 3 1277 514 314 91 4 chrX 90771223 90771488 -75878808 + B4 SINE B4 5 292 0 3 1277 1078 240 153 28 chrX 90771535 90771943 -75878353 + Lx2B LINE L1 6528 6994 -6 3 1277 373 276 153 12 chrX 90771982 90772308 -75877988 + L1MB2 LINE L1 3206 3577 -2566 3 1277 271 333 0 0 chrX 90772312 90772378 -75877918 + ID4_ SINE ID 9 74 -9 3 1277 374 251 112 88 chrX 90772379 90772584 -75877712 + L1MB2 LINE L1 3584 3793 -2347 3 1277 770 235 35 25 chrX 90772593 90772794 -75877502 + B3 SINE B2 2 204 -12 3 1277 351 298 161 14 chrX 90775850 90776061 -75874235 + MIR SINE MIR 21 262 0 3 1277 818 150 13 33 chrX 90776196 90776348 -75873948 + B1_Mur3 SINE Alu 1 149 0 3 1277 833 81 0 8 chrX 90776376 90776500 -75873796 + (GGAA)n Simple_repeat Simple_repeat 1 123 0 3 1277 462 114 0 0 chrX 90776579 90776649 -75873647 + (TA)n Simple_repeat Simple_repeat 1 70 0 3 1277 261 0 0 0 chrX 90776649 90776677 -75873619 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1277 32 0 0 0 chrX 90776778 90776810 -75873486 + AT_rich Low_complexity Low_complexity 1 32 0 4 1277 657 217 129 18 chrX 90776829 90777054 -75873242 + L1MB2 LINE L1 5726 5975 -196 3 1277 207 0 0 0 chrX 90777763 90777786 -75872510 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1277 296 324 0 0 chrX 90778889 90778963 -75871333 + ID4_ SINE ID 6 79 -4 4 1277 212 226 0 54 chrX 90780686 90780742 -75869554 - L3 LINE CR1 -2 4487 4435 4 1277 180 0 0 0 chrX 90780958 90780978 -75869318 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1277 223 296 52 99 chrX 90781090 90781281 -75869015 - MIR SINE MIR 0 262 81 4 1277 187 405 77 26 chrX 90781403 90781598 -75868698 - L3 LINE CR1 -943 3546 3342 4 1277 1067 102 0 0 chrX 90781911 90782058 -75868238 + B1_Mus1 SINE Alu 2 148 0 4 1277 694 109 242 0 chrX 90782638 90782766 -75867530 - B2_Mm2 SINE B2 -35 160 2 4 1277 248 316 150 50 chrX 90782950 90783110 -75867186 + LTR84b LTR ERVL 585 760 -1 4 1277 216 97 0 0 chrX 90783395 90783426 -75866870 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1277 898 169 101 11 chrX 90783508 90783687 -75866609 + URR1A DNA MER1_type 17 211 -15 4 1277 433 165 82 10 chrX 90784196 90784294 -75866002 + MIRb SINE MIR 94 198 -70 4 1277 1158 55 7 0 chrX 90785692 90785838 -75864458 + B1_Mus1 SINE Alu 2 148 0 4 1277 681 140 184 0 chrX 90785990 90786104 -75864192 + B1_Mus1 SINE Alu 2 136 -12 4 1277 258 32 0 0 chrX 90786105 90786136 -75864160 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 4 1277 182 185 71 36 chrX 90786460 90786516 -75863780 + MIR SINE MIR 86 143 -119 4 1277 293 320 115 0 chrX 90787538 90787632 -75862664 + PB1D10 SINE Alu 4 109 -40 4 1277 225 305 104 20 chrX 90788419 90788620 -75861676 + L1M5 LINE L1 5652 5869 -371 4 1277 1033 206 35 0 chrX 90788850 90789049 -75861247 + B3 SINE B2 1 206 -10 4 1277 203 286 169 72 chrX 90789216 90789548 -75860748 - L2 LINE L2 -340 3079 2716 4 1277 3202 41 5 8 chrX 90789684 90790081 -75860215 - MTA_Mm LTR MaLR 0 396 1 4 1277 819 171 14 7 chrX 90790131 90790278 -75860018 - B1_Mus1 SINE Alu 0 148 1 4 1277 510 174 0 114 chrX 90790667 90790790 -75859506 + B1_Mur1 SINE Alu 24 132 -17 4 1277 180 0 0 0 chrX 90790811 90790831 -75859465 + (TAA)n Simple_repeat Simple_repeat 2 21 0 4 1277 1418 190 162 14 chrX 90790945 90791303 -75858993 + MTD LTR MaLR 1 411 -8 4 1277 262 274 105 23 chrX 90791306 90791392 -75858904 - MIRb SINE MIR -67 201 109 4 1277 591 254 89 4 chrX 90791909 90792134 -75858162 + L1MA6 LINE L1 6034 6277 -23 4 1277 243 165 197 17 chrX 90792335 90792452 -75857844 - Lx9 LINE L1 0 7644 7507 4 1277 703 231 166 73 chrX 90792451 90792698 -75857598 + Lx9 LINE L1 6980 7249 -395 4 1277 198 346 47 28 chrX 90792760 90792867 -75857429 + L2 LINE L2 2651 2759 -660 4 1277 313 102 0 0 chrX 90792878 90792927 -75857369 - B3 SINE B2 -4 212 164 4 1277 369 43 0 0 chrX 90794439 90794486 -75855810 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1277 279 0 0 0 chrX 90794486 90794516 -75855780 + (GA)n Simple_repeat Simple_repeat 2 32 0 4 1277 1378 79 15 31 chrX 90795913 90796108 -75854188 + B2_Mm1t SINE B2 1 192 -1 4 1277 1778 62 4 16 chrX 90796747 90796993 -75853303 + L1_Mus2 LINE L1 6323 6565 -1 4 1277 187 0 57 94 chrX 90797002 90797015 -75853281 + (TAAA)n Simple_repeat Simple_repeat 2 15 0 4 1277 1197 48 0 0 chrX 90797015 90797162 -75853134 + B1_Mus2 SINE Alu 1 147 0 4 1277 187 0 57 94 chrX 90797162 90797201 -75853095 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 4 1277 342 0 0 0 chrX 90798024 90798062 -75852234 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 4 1277 283 304 50 46 chrX 90798073 90798219 -75852077 + B1F SINE Alu 3 149 0 4 1277 583 283 82 39 chrX 90798223 90798429 -75851867 + B3A SINE B2 2 216 0 4 1277 1163 100 43 27 chrX 90798452 90798637 -75851659 + B2_Mm2 SINE B2 1 188 -7 4 1277 272 312 68 15 chrX 90799175 90799314 -75850982 - Cheshire DNA MER1_type -2119 301 173 4 1277 356 314 32 6 chrX 90799877 90800018 -75850278 + PB1D10 SINE Alu 3 149 0 4 1277 935 154 82 6 chrX 90800420 90800603 -75849693 + L1_Mur3 LINE L1 3872 4068 -1812 4 1277 1334 224 11 53 chrX 90800601 90800978 -75849318 + Lx6 LINE L1 5665 6025 -1435 4 1277 1000 290 39 39 chrX 90800958 90801370 -75848926 + Lx7 LINE L1 7282 7693 -3 4 1277 1028 84 14 7 chrX 90803584 90803728 -75846568 + B1_Mus1 SINE Alu 2 146 -2 4 1277 215 296 0 0 chrX 90803774 90803828 -75846468 + PB1D10 SINE Alu 56 109 -8 4 1277 23 54 0 0 chrX 90804643 90804680 -75845616 + AT_rich Low_complexity Low_complexity 1 37 0 4 1277 273 322 132 6 chrX 90804856 90805033 -75845263 + MIRb SINE MIR 11 227 -41 4 1277 521 317 14 55 chrX 90805150 90805367 -75844929 - MER3 DNA MER1_type -1 208 1 4 1277 324 294 242 16 chrX 90805401 90805529 -75844767 - MER58A DNA MER1_type -49 175 19 4 1277 1351 80 5 31 chrX 90806124 90806318 -75843978 - B2_Mm2 SINE B2 -6 189 1 4 1277 588 53 0 0 chrX 90806475 90806551 -75843745 + (GA)n Simple_repeat Simple_repeat 2 77 0 4 1277 196 296 155 0 chrX 90807190 90807261 -75843035 + MIRc SINE MIR 14 95 -173 4 1277 337 313 7 78 chrX 90807411 90807451 -75842845 + MT2B LTR ERVL 129 158 -443 4 1277 561 268 35 7 chrX 90807451 90807594 -75842702 + B1F1 SINE Alu 3 149 0 4 1277 207 100 0 0 chrX 90807971 90808001 -75842295 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1277 206 118 0 38 chrX 90808553 90808606 -75841690 + (TCTCTG)n Simple_repeat Simple_repeat 4 54 0 4 1277 1158 55 0 0 chrX 90808835 90808981 -75841315 - B1_Mus2 SINE Alu 0 147 2 4 1277 398 234 83 30 chrX 90809534 90809666 -75840630 + L1MB5 LINE L1 5839 5977 -207 4 1277 271 239 9 9 chrX 90810306 90810416 -75839880 + (TG)n Simple_repeat Simple_repeat 1 110 0 4 1277 337 299 0 11 chrX 90810736 90810824 -75839472 + B4A SINE B4 2 88 -204 4 1277 31260 106 27 0 chrX 90810840 90816039 -75834257 + L1_Mus1 LINE L1 615 6007 -575 4 1277 671 68 0 0 chrX 90816043 90816131 -75834165 - L1_Mm LINE L1 -1443 4440 4353 4 1277 2953 12 0 0 chrX 90816125 90816459 -75833837 + L1Md_T LINE L1 5253 5586 -297 4 1277 8541 27 0 0 chrX 90816459 90817455 -75832841 + L1Md_T LINE L1 5587 6582 0 4 1277 2069 61 15 0 chrX 90817455 90817717 -75832579 + L1_Mus1 LINE L1 5998 6263 -304 4 1277 378 0 0 0 chrX 90817727 90817769 -75832527 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 4 1277 279 0 0 0 chrX 90817770 90817801 -75832495 + (CAAG)n Simple_repeat Simple_repeat 1 31 0 4 1277 662 156 64 24 chrX 90817854 90817979 -75832317 - B1_Mur3 SINE Alu -10 139 10 4 1277 352 310 71 0 chrX 90818006 90818119 -75832177 + RSINE1 SINE B4 44 164 -1 4 1277 603 225 129 31 chrX 90818128 90818321 -75831975 + B4A SINE B4 81 292 0 4 1277 236 311 16 121 chrX 90819765 90819841 -75830455 + Cheshire DNA MER1_type 29 98 -2322 4 1277 6121 57 4 0 chrX 90819841 90820601 -75829695 + L1_Mus1 LINE L1 5805 6567 0 4 1277 236 311 16 121 chrX 90820601 90820714 -75829582 + Cheshire DNA MER1_type 99 198 -2222 4 1277 1116 186 22 22 chrX 90820853 90821078 -75829218 + URR1B DNA MER1_type 1 225 0 4 1277 770 275 55 0 chrX 90821454 90821654 -75828642 + ID_B1 SINE B4 1 211 -13 4 1277 274 139 23 0 chrX 90821780 90821823 -75828473 - PB1 SINE Alu -61 66 23 4 1277 322 327 218 40 chrX 90823847 90824414 -75825882 - L2a LINE L2 0 3426 2758 4 1277 1085 76 0 14 chrX 90824919 90825066 -75825230 + B1_Mus2 SINE Alu 2 146 -1 4 1277 1037 99 211 0 chrX 90825485 90825656 -75824640 + B3 SINE B2 4 210 -6 4 1277 557 250 62 28 chrX 90825679 90825823 -75824473 + B1_Mur2 SINE Alu 1 149 0 4 1277 265 306 0 0 chrX 90826357 90826419 -75823877 - L2a LINE L2 -25 3401 3340 4 1277 247 293 50 89 chrX 90827015 90827116 -75823180 - MIRb SINE MIR -144 124 28 4 1277 294 87 0 0 chrX 90827166 90827212 -75823084 + (TTTG)n Simple_repeat Simple_repeat 1 46 0 4 1277 1196 36 0 0 chrX 90827900 90828039 -75822257 + B1_Mm SINE Alu 3 141 -6 4 1277 21 0 0 0 chrX 90828039 90828060 -75822236 + AT_rich Low_complexity Low_complexity 1 21 0 4 1277 893 176 198 0 chrX 90828376 90828563 -75821733 - URR1B DNA MER1_type -1 224 1 4 1277 327 206 0 76 chrX 90829093 90829172 -75821124 - ID4_ SINE ID -10 73 1 4 1277 475 282 66 6 chrX 90832551 90832733 -75817563 + Lx8 LINE L1 5208 5400 -480 4 159 1477 281 125 31 chrX 90832746 90833489 -75816807 + Lx8 LINE L1 5779 6555 -918 4 1278 849 173 7 0 chrX 90833501 90833640 -75816656 - B3 SINE B2 -72 144 5 4 1278 1137 117 142 0 chrX 90833872 90834069 -75816227 - URR1A DNA MER1_type 0 226 2 4 1278 537 276 118 28 chrX 90834078 90834536 -75815760 - L1MC5 LINE L1 -770 7191 6693 4 1278 248 259 18 9 chrX 90834703 90834812 -75815484 + (TAAA)n Simple_repeat Simple_repeat 3 112 0 4 1278 1092 43 65 0 chrX 90834819 90834957 -75815339 + B1_Mus1 SINE Alu 2 148 0 4 1278 336 19 57 0 chrX 90834967 90835020 -75815276 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1278 837 299 9 48 chrX 90835108 90835336 -75814960 + MER20 DNA MER1_type 1 219 0 4 1278 350 348 89 19 chrX 90835545 90835703 -75814593 - MER58A DNA MER1_type -36 188 20 4 1278 500 274 48 0 chrX 90836059 90836183 -75814113 + B4A SINE B4 2 131 -161 4 1278 1634 187 44 32 chrX 90837484 90837595 -75812701 - RLTR20B3 LTR ERVK 0 577 474 4 1278 342 0 0 0 chrX 90837595 90837633 -75812663 + (GA)n Simple_repeat Simple_repeat 1 38 0 4 1278 1634 187 44 32 chrX 90837633 90837859 -75812437 - RLTR20B3 LTR ERVK -104 473 236 4 1278 968 172 11 32 chrX 90837859 90838045 -75812251 + RLTR20B3 LTR ERVK 396 577 0 5 1278 3606 194 159 79 chrX 90838045 90839114 -75811182 + Lx6 LINE L1 6302 7456 -4 5 1278 21 0 0 0 chrX 90840199 90840220 -75810076 + AT_rich Low_complexity Low_complexity 1 21 0 5 1278 680 195 94 0 chrX 90842100 90842228 -75808068 + B1_Mus2 SINE Alu 1 140 -7 5 1278 392 291 108 12 chrX 90842244 90842411 -75807885 - B3A SINE B2 -15 183 1 5 1278 204 231 0 0 chrX 90843245 90843297 -75806999 + T-rich Low_complexity Low_complexity 1 52 0 5 1278 1056 110 0 0 chrX 90843297 90843443 -75806853 - B1_Mus2 SINE Alu 0 147 2 5 1278 367 280 101 18 chrX 90844700 90844809 -75805487 + PB1 SINE Alu 6 123 -4 5 1278 219 213 279 0 chrX 90844827 90844888 -75805408 + ID4_ SINE ID 5 82 -1 5 1278 430 214 214 0 chrX 90845503 90845606 -75804690 - RSINE1 SINE B4 -37 128 4 5 1278 3102 90 24 26 chrX 90845858 90846327 -75803969 + Lx3_Mus LINE L1 6535 7002 -7 5 1278 868 128 7 21 chrX 90846397 90846541 -75803755 + ORR1A0 LTR MaLR 205 346 0 5 1278 290 161 319 44 chrX 90846541 90846632 -75803664 + B1_Mm SINE Alu 33 148 0 5 1278 548 81 11 0 chrX 90846864 90846951 -75803345 + (CA)n Simple_repeat Simple_repeat 2 89 0 5 1278 1980 180 89 0 chrX 90847110 90847493 -75802803 + MTD LTR MaLR 1 417 -2 5 1278 1765 220 44 27 chrX 90847685 90848096 -75802200 - Lx6 LINE L1 -27 7433 7016 5 1278 207 222 284 29 chrX 90848155 90848257 -75802039 + L2a LINE L2 3293 3420 -6 5 1278 494 177 83 58 chrX 90848266 90848386 -75801910 + B1_Mur2 SINE Alu 25 147 -2 5 1278 35 0 0 0 chrX 90852219 90852254 -75798042 + AT_rich Low_complexity Low_complexity 1 35 0 5 1278 209 127 0 73 chrX 90852317 90852349 -75797947 + T-rich Low_complexity Low_complexity 32 63 0 5 1278 1181 55 0 20 chrX 90852349 90852498 -75797798 - B1_Mus2 SINE Alu 0 147 2 5 1278 209 127 0 73 chrX 90852498 90852533 -75797763 + T-rich Low_complexity Low_complexity 2 31 0 5 1278 812 174 7 7 chrX 90852543 90852682 -75797614 - B1_Mus2 SINE Alu -6 141 3 5 1278 879 208 104 35 chrX 90852695 90852954 -75797342 - Lx8 LINE L1 -25 7448 7172 5 1278 2087 231 41 2 chrX 90853010 90853495 -75796801 - Lx6 LINE L1 0 7460 6957 5 1278 279 317 74 12 chrX 90853722 90853885 -75796411 + L1MC4 LINE L1 5384 5556 -2326 5 1278 244 370 83 0 chrX 90853896 90854004 -75796292 + B1F SINE Alu 1 117 -32 5 1278 1166 49 0 0 chrX 90854004 90854146 -75796150 + B1_Mus1 SINE Alu 2 143 -5 5 1278 695 270 75 57 chrX 90854218 90854430 -75795866 + B3 SINE B2 1 216 0 5 1278 1043 212 14 19 chrX 90854453 90854664 -75795632 + B3 SINE B2 1 210 -6 5 1278 25 31 0 0 chrX 90854666 90854698 -75795598 + AT_rich Low_complexity Low_complexity 1 32 0 5 1278 252 0 0 0 chrX 90854963 90854991 -75795305 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1278 349 219 57 34 chrX 90855041 90855227 -75795069 + L1MB7 LINE L1 5633 5825 -355 5 1278 31131 79 13 3 chrX 90855229 90860408 -75789888 + L1Md_F2 LINE L1 355 5586 -297 5 1278 7721 64 2 3 chrX 90860408 90861423 -75788873 + L1Md_F2 LINE L1 5587 6582 0 5 1278 981 116 7 0 chrX 90861428 90861575 -75788721 + B1_Mus1 SINE Alu 1 148 0 5 1278 664 266 112 4 chrX 90861582 90861850 -75788446 + L1MB7 LINE L1 5814 6110 -74 5 1278 936 136 0 20 chrX 90862024 90862174 -75788122 + B1_Mur4 SINE Alu 4 150 0 5 1278 1170 48 0 13 chrX 90862970 90863119 -75787177 + B1_Mus2 SINE Alu 1 147 0 5 1278 432 296 86 0 chrX 90863128 90863290 -75787006 + L1MC4 LINE L1 6807 6982 -1060 5 1278 607 319 79 11 chrX 90863310 90863576 -75786720 + B4A SINE B4 1 284 -8 5 1278 1224 79 11 43 chrX 90863660 90863845 -75786451 + B2_Mm1t SINE B2 1 179 -14 5 1278 351 250 12 48 chrX 90863936 90864020 -75786276 + PB1 SINE Alu 43 123 -4 5 1278 237 264 120 89 chrX 90864127 90864452 -75785844 + L1MC4 LINE L1 7308 7642 -400 5 1278 532 298 16 107 chrX 90864479 90864731 -75785565 + B4 SINE B4 1 229 -63 5 1278 326 23 23 0 chrX 90864748 90864791 -75785505 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1278 379 320 57 25 chrX 90865143 90865300 -75784996 + RMER30 DNA MER1_type 10 171 -31 5 1278 1080 63 21 0 chrX 90865549 90865691 -75784605 + B1_Mm SINE Alu 2 146 -1 5 1278 454 288 42 23 chrX 90865966 90866110 -75784186 + B1F SINE Alu 1 150 0 5 1278 267 274 0 61 chrX 90866131 90866197 -75784099 + MTE2b LTR MaLR 15 76 -303 5 1278 1467 108 26 9 chrX 90866197 90866430 -75783866 + RMER1A Other Other 633 869 -161 5 1278 189 74 0 0 chrX 90866430 90866457 -75783839 + (TTG)n Simple_repeat Simple_repeat 1 27 0 5 1278 4138 124 107 185 chrX 90866483 90867283 -75783013 + RLTR21 LTR ERVK 515 1147 -425 5 1278 330 26 0 0 chrX 90867283 90867322 -75782974 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1278 4138 124 107 185 chrX 90867322 90867472 -75782824 + RLTR21 LTR ERVK 1148 1290 -282 5 1278 401 0 20 0 chrX 90867472 90867521 -75782775 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1278 4138 124 107 185 chrX 90867521 90867704 -75782592 + RLTR21 LTR ERVK 1291 1560 -12 5 1278 314 313 117 29 chrX 90867707 90867878 -75782418 - MIRb SINE MIR -81 187 2 5 1278 1144 129 121 24 chrX 90867992 90868198 -75782098 - URR1A DNA MER1_type 0 226 1 5 1278 226 292 129 50 chrX 90868303 90868404 -75781892 + MTEa LTR MaLR 13 121 -258 5 1278 1030 98 21 0 chrX 90868440 90868583 -75781713 - B1_Mus2 SINE Alu 0 147 2 5 1278 1622 21 0 11 chrX 90868627 90868816 -75781480 - B2_Mm1a SINE B2 -5 188 2 5 1278 1016 263 76 16 chrX 90868820 90869071 -75781225 + MTEa LTR MaLR 111 376 -3 5 1278 488 250 51 7 chrX 90870270 90870407 -75779889 + B3 SINE B2 65 207 -9 5 1278 348 215 0 0 chrX 90870459 90870524 -75779772 - ID2 SINE ID -13 70 6 5 1278 605 251 28 107 chrX 90870681 90870705 -75779591 + B4 SINE B4 74 175 -117 5 1278 985 127 0 0 chrX 90870705 90870847 -75779449 + B1_Mur3 SINE Alu 7 148 -1 5 1278 605 251 28 107 chrX 90870847 90870859 -75779437 + B4 SINE B4 176 237 -55 5 1278 399 310 120 43 chrX 90870969 90871178 -75779118 + MIR SINE MIR 1 225 -37 5 1278 887 154 0 57 chrX 90872196 90872354 -75777942 + B1_Mur2 SINE Alu 1 149 0 5 1278 358 19 18 36 chrX 90872354 90872410 -75777886 + (CAAAAA)n Simple_repeat Simple_repeat 6 60 0 5 1278 854 224 153 39 chrX 90872462 90872717 -75777579 - MTD LTR MaLR -135 284 1 5 1278 1247 34 0 0 chrX 90872822 90872968 -75777328 + B1_Mm SINE Alu 2 147 0 5 1278 456 67 0 0 chrX 90873418 90873478 -75776818 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1278 552 336 50 12 chrX 90873657 90873898 -75776398 + Tigger8 DNA MER2_type 412 661 -5 5 1278 191 333 0 0 chrX 90874089 90874149 -75776147 - L2c LINE L2 -48 3339 3280 5 1278 268 333 128 0 chrX 90874559 90874661 -75775635 - PB1D10 SINE Alu -2 115 1 5 1278 542 388 74 50 chrX 90874762 90874942 -75775354 + MLT1N2 LTR MaLR 129 314 -248 5 1278 1151 51 0 0 chrX 90874942 90875079 -75775217 - B1_Mm SINE Alu -10 137 1 5 1278 542 388 74 50 chrX 90875079 90875318 -75774978 + MLT1N2 LTR MaLR 315 558 -4 5 1278 206 376 30 0 chrX 90875740 90875841 -75774455 + MIRm SINE MIR 170 273 -3 5 1278 333 129 0 0 chrX 90876014 90876084 -75774212 + (A)n Simple_repeat Simple_repeat 1 70 0 5 1278 329 0 24 0 chrX 90876487 90876528 -75773768 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1278 224 330 89 0 chrX 90878140 90878237 -75772059 + B1F1 SINE Alu 4 108 -41 5 1278 201 259 0 17 chrX 90878253 90878312 -75771984 + GA-rich Low_complexity Low_complexity 4 61 0 5 1278 2016 130 68 14 chrX 90878352 90878715 -75771581 - ORR1A2 LTR MaLR 0 378 1 5 1278 705 80 0 39 chrX 90878970 90879074 -75771222 + B1_Mus2 SINE Alu 48 147 0 5 1278 239 81 0 0 chrX 90879109 90879137 -75771159 + B1_Mm SINE Alu 108 135 -12 5 1278 180 0 0 0 chrX 90879137 90879157 -75771139 + (G)n Simple_repeat Simple_repeat 1 20 0 5 1278 539 355 46 60 chrX 90879327 90879609 -75770687 + MLT1J LTR MaLR 226 503 -9 5 1278 4148 179 102 43 chrX 90879714 90880768 -75769528 + RMER19B LTR ERVK 1 890 -12 5 1278 283 338 0 0 chrX 90880901 90880981 -75769315 - L2a LINE L2 -3 3423 3344 5 1278 1385 93 10 15 chrX 90881059 90881255 -75769041 + B2_Mm2 SINE B2 1 195 0 5 1278 248 206 13 52 chrX 90881276 90881353 -75768943 + GA-rich Low_complexity Low_complexity 5 78 0 5 1278 2277 81 45 0 chrX 90881901 90882211 -75768085 + ORR1A2 LTR MaLR 2 325 -2 5 1278 8097 148 37 36 chrX 90882213 90883047 -75767249 + ORR1A2-int LTR MaLR 1 872 -920 5 1278 1137 89 0 0 chrX 90883047 90883193 -75767103 + B1_Mus2 SINE Alu 2 147 0 5 1278 8097 148 37 36 chrX 90883193 90883887 -75766409 + ORR1A2-int LTR MaLR 873 1531 -261 5 1278 2132 76 3 7 chrX 90885006 90885299 -75764997 + ORR1A2-int LTR MaLR 1672 1963 0 5 1278 2569 65 6 3 chrX 90885299 90885625 -75764671 + ORR1A2 LTR MaLR 1 327 0 5 1278 186 43 0 0 chrX 90886091 90886114 -75764182 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1278 845 48 0 0 chrX 90886114 90886219 -75764077 - B1_Mm SINE Alu -9 138 34 5 1278 252 350 72 7 chrX 90886548 90886686 -75763610 + MamRep605 Unknown Unknown 586 732 -144 5 1278 1170 104 53 21 chrX 90887102 90887289 -75763007 + B2_Mm2 SINE B2 1 193 -2 5 1278 733 100 16 8 chrX 90887291 90887412 -75762884 + (GAAA)n Simple_repeat Simple_repeat 2 123 0 5 1278 319 264 0 0 chrX 90887550 90887622 -75762674 - PB1D10 SINE Alu -21 96 25 5 1278 1091 104 17 23 chrX 90887641 90887818 -75762478 - B2_Mm2 SINE B2 -18 177 2 5 1278 621 283 13 38 chrX 90888220 90888378 -75761918 + RSINE1 SINE B4 12 165 0 5 1278 1112 83 7 0 chrX 90888411 90888556 -75761740 - B1_Mus2 SINE Alu -1 146 1 5 1278 1092 88 0 26 chrX 90888640 90888792 -75761504 + B1_Mus1 SINE Alu 1 148 0 5 1278 25 0 0 0 chrX 90888792 90888817 -75761479 + AT_rich Low_complexity Low_complexity 1 25 0 5 1278 1131 88 0 0 chrX 90889254 90889402 -75760894 + B1_Mus1 SINE Alu 1 148 0 5 1278 420 205 0 0 chrX 90889987 90890070 -75760226 - L1MD1 LINE L1 -6 6236 6154 5 1278 278 295 180 36 chrX 90890196 90890474 -75759822 - L1MD1 LINE L1 -667 5692 5375 5 1278 21 0 0 0 chrX 90890576 90890597 -75759699 + AT_rich Low_complexity Low_complexity 1 21 0 6 1278 716 147 8 50 chrX 90890658 90890826 -75759470 + B1_Mur3 SINE Alu 2 144 -5 6 1278 215 250 0 0 chrX 90890830 90890882 -75759414 + (TAAA)n Simple_repeat Simple_repeat 3 54 0 6 1278 1089 66 20 7 chrX 90890992 90891144 -75759152 - B2_Mm2 SINE B2 -3 192 39 6 1278 414 135 40 0 chrX 90891170 90891244 -75759052 - Lx9 LINE L1 -600 7044 6968 6 1278 828 237 111 32 chrX 90891256 90891529 -75758767 + Lx8 LINE L1 7173 7468 -5 6 1278 1201 61 0 0 chrX 90891529 90891676 -75758620 + B1_Mm SINE Alu 1 147 0 6 1278 21 0 0 0 chrX 90891826 90891847 -75758449 + AT_rich Low_complexity Low_complexity 1 21 0 6 1278 243 0 0 0 chrX 90891855 90891882 -75758414 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 6 1278 489 305 45 19 chrX 90891894 90892051 -75758245 - RSINE1 SINE B4 -1 164 4 6 1278 523 263 108 48 chrX 90892072 90892404 -75757892 - L1MCa LINE L1 -4361 2041 1631 6 1278 981 68 68 0 chrX 90892458 90892590 -75757706 + B1_Mus1 SINE Alu 5 145 -3 6 1278 428 0 19 0 chrX 90892900 90892952 -75757344 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1278 3533 139 60 15 chrX 90893001 90893805 -75756491 + L1_Mur3 LINE L1 64 1267 -6461 6 1278 1040 100 0 0 chrX 90893805 90893945 -75756351 + B1_Mus1 SINE Alu 1 140 -8 6 1278 699 12 0 0 chrX 90893945 90894025 -75756271 + (GAA)n Simple_repeat Simple_repeat 2 81 0 6 1278 4105 139 37 33 chrX 90894028 90894911 -75755385 + L1_Mur3 LINE L1 1976 2862 -3018 6 1278 1838 177 16 18 chrX 90895022 90895408 -75754888 + Lx7 LINE L1 5660 6044 -1652 6 1278 3923 237 88 62 chrX 90895418 90896718 -75753578 + Lx7 LINE L1 6362 7695 -1 6 1278 939 146 0 0 chrX 90896759 90896903 -75753393 + B1_Mus2 SINE Alu 4 147 0 6 1278 1194 72 0 0 chrX 90896995 90897148 -75753148 + B2_Mm2 SINE B2 2 154 -41 6 1278 241 324 126 0 chrX 90897217 90897328 -75752968 + PB1 SINE Alu 2 126 -1 6 1278 328 266 100 47 chrX 90897348 90897498 -75752798 - L1MCa LINE L1 -5071 1437 1280 6 1278 485 264 72 119 chrX 90898247 90898540 -75751756 - MER115 DNA Tip100 0 693 415 6 1278 183 42 0 0 chrX 90898655 90898679 -75751617 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1278 1121 72 0 0 chrX 90898694 90898833 -75751463 - B1_Mus2 SINE Alu -6 141 3 6 1278 195 42 0 0 chrX 90899329 90899353 -75750943 + (TGGGGG)n Simple_repeat Simple_repeat 1 24 0 6 1278 1688 135 102 26 chrX 90899447 90899633 -75750663 + RMER17C LTR ERVK 1 207 -203 6 1278 204 40 0 0 chrX 90899633 90899658 -75750638 + (TC)n Simple_repeat Simple_repeat 2 26 0 6 1278 1688 135 102 26 chrX 90899658 90899852 -75750444 + RMER17C LTR ERVK 208 410 0 6 1278 383 227 99 40 chrX 90900817 90900918 -75749378 + PB1D10 SINE Alu 11 117 0 6 1278 232 273 14 57 chrX 90900940 90901010 -75749286 + ID4_ SINE ID 1 67 -16 6 1278 472 199 72 57 chrX 90901035 90901241 -75749055 + Lx2B LINE L1 6683 6985 -73 6 1278 36 23 0 0 chrX 90901267 90901310 -75748986 + AT_rich Low_complexity Low_complexity 1 43 0 6 1278 482 31 0 15 chrX 90901473 90901538 -75748758 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 6 1278 1073 73 0 0 chrX 90901538 90901675 -75748621 - B1_Mus1 SINE Alu -10 138 2 6 1278 498 200 50 42 chrX 90901683 90901803 -75748493 - B1F SINE Alu -20 129 9 6 1278 285 274 120 19 chrX 90901823 90901931 -75748365 - MIRb SINE MIR -99 169 51 6 1278 808 146 34 20 chrX 90901937 90902084 -75748212 + B1_Mur4 SINE Alu 2 150 0 6 1278 784 228 63 68 chrX 90902161 90902368 -75747928 - B3 SINE B2 -9 207 2 6 1278 705 228 5 32 chrX 90902368 90902541 -75747755 - MER3 DNA MER1_type -36 173 6 6 1278 576 274 9 71 chrX 90902690 90902902 -75747394 + MamRep434 DNA TcMar 103 301 -125 6 1278 1400 76 5 0 chrX 90903022 90903206 -75747090 - B2_Mm1t SINE B2 -8 185 1 6 1278 444 37 0 0 chrX 90903648 90903702 -75746594 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1278 1164 62 0 7 chrX 90904030 90904176 -75746120 - B1_Mus2 SINE Alu -2 145 1 6 1278 286 295 158 48 chrX 90904235 90904257 -75746039 + B4 SINE B4 70 187 -105 6 1278 577 145 237 8 chrX 90904257 90904375 -75745921 + B1F2 SINE Alu 4 148 -1 6 1278 1150 130 33 0 chrX 90904407 90904591 -75745705 - B2_Mm2 SINE B2 -3 192 3 6 1278 430 261 84 8 chrX 90905279 90905410 -75744886 + B1F SINE Alu 1 141 -8 6 1278 613 261 80 0 chrX 90905707 90905829 -75744467 + B4A SINE B4 144 276 -16 6 1278 407 68 0 17 chrX 90905829 90905889 -75744407 + (CATA)n Simple_repeat Simple_repeat 4 62 0 6 1278 613 261 80 0 chrX 90905889 90905904 -75744392 + B4A SINE B4 277 291 -1 6 1278 473 138 0 0 chrX 90905986 90906073 -75744223 - Lx2 LINE L1 -2 6995 6909 6 1278 245 217 131 16 chrX 90906128 90906189 -75744107 - tRNA-Ala-GCY_ tRNA tRNA 0 75 8 6 1278 230 262 127 32 chrX 90906141 90906204 -75744092 - ID4_ SINE ID -14 69 1 6 1278 889 42 0 8 chrX 90906322 90906441 -75743855 - B1_Mus2 SINE Alu 0 147 30 6 1278 21 0 0 0 chrX 90906451 90906472 -75743824 + AT_rich Low_complexity Low_complexity 1 21 0 6 1278 870 160 0 68 chrX 90906481 90906642 -75743654 - B1_Mur4 SINE Alu 0 150 1 6 1278 1147 35 43 0 chrX 90907060 90907201 -75743095 + B1_Mm SINE Alu 1 147 0 6 1278 245 51 0 25 chrX 90907205 90907245 -75743051 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 6 1278 207 0 0 0 chrX 90907306 90907329 -75742967 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 6 1278 317 306 51 0 chrX 90907330 90907428 -75742868 - PB1D10 SINE Alu -14 103 1 6 1278 435 300 63 50 chrX 90907651 90907872 -75742424 - Tigger13a DNA MER2_type -182 589 366 6 1278 1428 55 11 0 chrX 90907921 90908102 -75742194 + B2_Mm1t SINE B2 2 184 -9 6 1278 276 303 0 38 chrX 90908328 90908407 -75741889 + PB1D10 SINE Alu 27 102 -15 6 1278 199 197 63 101 chrX 90908410 90908489 -75741807 - L2c LINE L2 -33 3354 3279 6 1278 26 0 0 0 chrX 90908646 90908672 -75741624 + AT_rich Low_complexity Low_complexity 1 26 0 6 1278 489 282 0 17 chrX 90908672 90908791 -75741505 - PB1D7 SINE Alu -3 117 1 6 1278 819 230 7 0 chrX 90909046 90909198 -75741098 - B3 SINE B2 -62 154 2 6 1278 22 35 0 0 chrX 90909198 90909227 -75741069 + AT_rich Low_complexity Low_complexity 1 29 0 6 1278 860 314 118 31 chrX 90909399 90909790 -75740506 - LTR75 LTR ERVL -36 526 102 6 1278 495 272 81 0 chrX 90909801 90909937 -75740359 - MER20 DNA MER1_type -72 147 1 6 1278 564 218 150 34 chrX 90909988 90910368 -75739928 - L1MC5 LINE L1 -233 7728 7305 6 1278 506 254 40 32 chrX 90910681 90910807 -75739489 - ID_B1 SINE B4 0 224 98 6 1278 233 315 39 16 chrX 90910882 90911011 -75739285 - L1MC5 LINE L1 -980 7062 6931 6 1278 3084 66 4 100 chrX 90911252 90911742 -75738554 - L1_Mus1 LINE L1 0 6567 6125 6 1278 758 82 0 0 chrX 90912156 90912254 -75738042 + B1_Mus1 SINE Alu 2 99 -49 6 1278 3412 33 0 0 chrX 90912305 90912704 -75737592 - L1Md_F3 LINE L1 -1 6583 6185 6 1278 997 106 7 0 chrX 90912795 90912937 -75737359 + B2_Mm1t SINE B2 37 179 -14 6 1278 1143 71 0 0 chrX 90913047 90913188 -75737108 - B1_Mus1 SINE Alu -6 142 2 6 1278 253 263 49 73 chrX 90913253 90913335 -75736961 - ID4 SINE ID -1 82 3 6 1278 240 355 122 0 chrX 90913536 90913643 -75736653 + MIRb SINE MIR 5 124 -144 6 1278 1468 281 55 38 chrX 90913785 90913990 -75736306 + MLT1D LTR MaLR 1 217 -288 6 1278 1070 108 17 6 chrX 90913990 90914167 -75736129 - L1_Mus4 LINE L1 -2 6634 6456 6 1278 1468 281 55 38 chrX 90914167 90914456 -75735840 + MLT1D LTR MaLR 218 503 -2 6 1278 280 245 59 78 chrX 90914760 90914862 -75735434 + PB1D10 SINE Alu 5 104 -13 6 1278 183 42 0 0 chrX 90916106 90916130 -75734166 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 6 1278 544 256 70 0 chrX 90916140 90916269 -75734027 - RSINE1 SINE B4 -24 141 4 6 1278 236 336 163 8 chrX 90916829 90916952 -75733344 + MIRc SINE MIR 1 142 -126 6 1278 332 209 151 78 chrX 90917939 90918105 -75732191 - MER5A DNA MER1_type -10 179 2 6 1278 26 30 0 0 chrX 90918400 90918433 -75731863 + AT_rich Low_complexity Low_complexity 1 33 0 6 1278 419 250 255 7 chrX 90918647 90918792 -75731504 - B3A SINE B2 -17 181 1 6 1278 221 91 0 43 chrX 90918869 90918915 -75731381 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 6 1278 1260 28 0 0 chrX 90918915 90919060 -75731236 - B1_Mus2 SINE Alu -2 145 1 6 1278 408 282 19 0 chrX 90919091 90919108 -75731188 + MER5A DNA MER1_type 1 19 -170 6 1278 346 271 60 98 chrX 90919108 90919292 -75731004 - MER5A DNA MER1_type -3 186 10 6 1278 479 317 150 0 chrX 90919422 90919602 -75730694 + MIR SINE MIR 53 259 -3 6 1278 269 48 48 0 chrX 90921198 90921240 -75729056 + (TTTC)n Simple_repeat Simple_repeat 1 44 0 6 1278 21 0 0 0 chrX 90921581 90921602 -75728694 + AT_rich Low_complexity Low_complexity 1 21 0 6 1278 216 0 0 0 chrX 90923008 90923032 -75727264 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1278 1049 252 46 80 chrX 90925160 90925361 -75724935 + B4A SINE B4 1 211 -81 6 1278 1165 70 0 0 chrX 90925361 90925504 -75724792 + B1_Mus2 SINE Alu 1 143 -4 6 1278 1049 252 46 80 chrX 90925504 90925604 -75724692 + B4A SINE B4 212 292 0 6 1278 215 222 0 0 chrX 90925605 90925650 -75724646 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1278 3030 118 8 27 chrX 90925690 90926170 -75724126 - Lx2 LINE L1 0 6997 6527 6 1278 3968 96 70 3 chrX 90926170 90926799 -75723497 + Lx2 LINE L1 5812 6482 -515 6 1278 413 236 99 44 chrX 90926842 90926938 -75723358 - MER33 DNA MER1_type 0 324 222 6 1278 1319 82 27 0 chrX 90926938 90927121 -75723175 - B2_Mm2 SINE B2 -7 188 1 6 1278 413 236 99 44 chrX 90927121 90927206 -75723090 - MER33 DNA MER1_type -103 221 133 6 1278 214 338 29 14 chrX 90927271 90927340 -75722956 - B4A SINE B4 -180 112 43 6 1278 262 247 174 10 chrX 90927357 90927403 -75722893 - MER33 DNA MER1_type -184 140 92 6 1278 2370 125 54 26 chrX 90927403 90927597 -75722699 + RMER10B LTR ERVL 1 214 -184 7 1278 714 24 0 0 chrX 90927597 90927681 -75722615 + (TCTCC)n Simple_repeat Simple_repeat 2 85 0 7 1278 2370 125 54 26 chrX 90927681 90927873 -75722423 + RMER10B LTR ERVL 215 397 -1 7 1278 262 247 174 10 chrX 90927873 90927924 -75722372 - MER33 DNA MER1_type -233 91 27 6 1278 1181 43 0 0 chrX 90928019 90928158 -75722138 - B1_Mus2 SINE Alu -8 139 1 7 1278 394 225 0 48 chrX 90928187 90928271 -75722025 + ID4 SINE ID 2 81 -2 7 1278 1690 206 62 74 chrX 90928846 90928944 -75721352 + MTD LTR MaLR 1 83 -336 7 1278 696 149 59 15 chrX 90928944 90929080 -75721216 + B1_Mur2 SINE Alu 3 144 -5 7 1278 1690 206 62 74 chrX 90929080 90929400 -75720896 + MTD LTR MaLR 84 414 -5 7 1278 1688 195 62 101 chrX 90929566 90930004 -75720292 - MTC LTR MaLR 0 421 1 7 1278 321 260 77 45 chrX 90930757 90931003 -75719293 - RMER17D LTR ERVK -448 441 188 7 1278 201 74 0 0 chrX 90931079 90931106 -75719190 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 7 1278 243 0 0 0 chrX 90931321 90931348 -75718948 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 7 1278 1056 113 6 6 chrX 90931348 90931508 -75718788 - B2_Mm1t SINE B2 -33 160 1 7 1278 306 253 53 0 chrX 90933145 90933220 -75717076 - ID4_ SINE ID 0 83 5 7 1278 295 289 182 24 chrX 90933308 90933517 -75716779 + L1ME3A LINE L1 5738 5979 -194 7 1278 1154 71 26 0 chrX 90933760 90933914 -75716382 + B2_Mm1t SINE B2 2 159 -34 7 1278 351 0 0 0 chrX 90933914 90933953 -75716343 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 7 1278 2362 252 97 30 chrX 90934015 90934787 -75715509 - Charlie7 DNA MER1_type -1334 1278 455 7 1278 849 269 33 0 chrX 90934834 90935046 -75715250 - ID_B1 SINE B4 -5 219 1 7 1278 418 303 5 98 chrX 90935046 90935128 -75715168 - Charlie7 DNA MER1_type -2129 483 419 7 1278 791 218 36 21 chrX 90935128 90935320 -75714976 - B3A SINE B2 -1 197 3 7 1278 418 303 5 98 chrX 90935320 90935431 -75714865 - Charlie7 DNA MER1_type -2194 418 308 7 1278 297 75 0 0 chrX 90935716 90935756 -75714540 + (TTG)n Simple_repeat Simple_repeat 3 42 0 7 1278 663 48 0 0 chrX 90935923 90936006 -75714290 + (TCC)n Simple_repeat Simple_repeat 3 85 0 7 1278 228 329 0 24 chrX 90936115 90936199 -75714097 - ID4 SINE ID 0 83 2 7 1278 260 200 0 13 chrX 90936809 90936852 -75713444 + T-rich Low_complexity Low_complexity 37 78 0 7 1278 838 135 43 0 chrX 90936852 90936993 -75713303 - B1_Mus1 SINE Alu -1 147 1 7 1278 260 200 0 13 chrX 90936993 90937025 -75713271 + T-rich Low_complexity Low_complexity 5 36 0 7 1278 703 210 7 28 chrX 90937036 90937178 -75713118 - B1_Mur2 SINE Alu -2 147 9 7 1278 273 245 18 133 chrX 90937085 90937198 -75713098 - MT2B LTR ERVL -346 255 156 7 1278 1152 68 0 7 chrX 90937220 90937368 -75712928 + B1_Mus1 SINE Alu 2 148 0 7 1278 273 243 0 0 chrX 90937368 90937438 -75712858 + GA-rich Low_complexity Low_complexity 2 71 0 7 1278 969 290 12 31 chrX 90937515 90937835 -75712461 - Lx8 LINE L1 -118 7355 7042 7 1278 526 239 81 44 chrX 90937989 90938342 -75711954 + L1M5 LINE L1 5312 5669 -525 7 1278 21 36 0 0 chrX 90938367 90938395 -75711901 + AT_rich Low_complexity Low_complexity 1 28 0 7 1278 904 238 9 24 chrX 90938442 90938651 -75711645 - B3A SINE B2 0 216 9 7 1278 3209 36 8 8 chrX 90938807 90939202 -75711094 - MTA_Mm LTR MaLR -1 395 1 7 1278 396 301 44 0 chrX 90939431 90939567 -75710729 - L2a LINE L2 -8 3418 3277 7 1278 443 342 71 52 chrX 90939589 90940012 -75710284 + L2a LINE L2 2247 2677 -742 7 1278 688 256 19 0 chrX 90940057 90940213 -75710083 + ID_B1 SINE B4 64 222 -2 7 1278 336 281 58 119 chrX 90940224 90940519 -75709777 + B4A SINE B4 3 279 -13 7 1278 265 89 36 0 chrX 90940606 90940619 -75709677 + (TTTTTG)n Simple_repeat Simple_repeat 3 15 0 7 1278 1221 41 7 0 chrX 90940619 90940765 -75709531 - B1_Mus1 SINE Alu -1 147 1 7 1278 265 89 36 0 chrX 90940765 90940807 -75709489 + (TTTTTG)n Simple_repeat Simple_repeat 1 44 0 7 1278 211 343 0 0 chrX 90940807 90940874 -75709422 + L2a LINE L2 3333 3399 -27 7 1278 613 285 28 11 chrX 90941242 90941423 -75708873 + MER3 DNA MER1_type 12 195 -14 7 1278 186 189 0 0 chrX 90942064 90942101 -75708195 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1278 370 342 69 12 chrX 90943002 90943162 -75707134 - MamGypLTR3 LTR Gypsy -16 823 655 7 1278 36 40 0 0 chrX 90943775 90943825 -75706471 + AT_rich Low_complexity Low_complexity 1 50 0 7 1278 425 296 0 34 chrX 90943832 90943951 -75706345 - RSINE1 SINE B4 -38 127 13 7 1278 261 276 12 50 chrX 90944477 90944557 -75705739 + B1F SINE Alu 67 143 -6 7 1278 231 36 0 0 chrX 90944562 90944590 -75705706 + (CAA)n Simple_repeat Simple_repeat 3 30 0 7 1278 888 229 0 57 chrX 90944634 90944828 -75705468 + B3A SINE B2 1 183 -15 7 1278 333 0 0 0 chrX 90945304 90945341 -75704955 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1278 423 292 0 0 chrX 90945746 90945859 -75704437 + PB1D10 SINE Alu 3 115 -2 7 1278 315 49 0 0 chrX 90946527 90946568 -75703728 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1278 262 267 26 26 chrX 90946710 90946787 -75703509 + MIR SINE MIR 83 159 -103 7 1278 643 172 25 41 chrX 90946923 90947044 -75703252 - PB1D7 SINE Alu -1 119 1 7 1278 348 229 71 30 chrX 90947215 90947314 -75702982 - PB1D7 SINE Alu -17 103 1 7 1278 372 362 0 28 chrX 90947656 90947801 -75702495 + B1F SINE Alu 1 141 -8 7 1278 310 279 43 49 chrX 90948820 90948982 -75701314 - MER5A DNA MER1_type 0 189 29 7 1278 539 53 0 13 chrX 90949289 90949365 -75700931 + (TC)n Simple_repeat Simple_repeat 1 75 0 7 1278 218 244 0 0 chrX 90949369 90949414 -75700882 + C-rich Low_complexity Low_complexity 3 47 0 7 1278 298 271 0 14 chrX 90950107 90950178 -75700118 - ID4_ SINE ID -6 77 8 7 1278 268 211 26 0 chrX 90950402 90950478 -75699818 + CT-rich Low_complexity Low_complexity 2 79 0 7 1278 268 280 141 25 chrX 90950802 90950923 -75699373 - MER63A DNA AcHobo -31 179 45 7 1278 320 182 0 0 chrX 90951081 90951136 -75699160 + PB1D9 SINE Alu 59 113 -7 7 1278 816 98 63 0 chrX 90951330 90951473 -75698823 - Lx LINE L1 -1 6653 6502 7 1278 390 21 0 0 chrX 90952219 90952266 -75698030 + (GA)n Simple_repeat Simple_repeat 2 48 0 7 1278 348 262 114 8 chrX 90953170 90953293 -75697003 - L1MCa LINE L1 -6192 316 181 7 1278 317 225 0 11 chrX 90953314 90953404 -75696892 + CT-rich Low_complexity Low_complexity 2 90 0 7 1278 257 302 190 0 chrX 90953427 90953543 -75696753 - L1MCa LINE L1 -6367 141 4 7 1278 420 304 27 55 chrX 90953575 90953721 -75696575 + B1F SINE Alu 3 144 -5 7 1278 1501 255 112 17 chrX 90953964 90954562 -75695734 - Charlie2a DNA MER1_type -537 2324 1670 7 1278 560 242 33 137 chrX 90954946 90955157 -75695139 - B3A SINE B2 0 198 10 7 1278 949 117 7 14 chrX 90955215 90955363 -75694933 + B1_Mus2 SINE Alu 1 147 0 7 1278 1793 278 149 61 chrX 90955380 90956183 -75694113 - Charlie2a DNA MER1_type -1670 1191 370 7 1278 1423 116 9 39 chrX 90956183 90956416 -75693880 + URR1A DNA MER1_type 1 226 0 7 1278 1793 278 149 61 chrX 90956416 90956701 -75693595 - Charlie2a DNA MER1_type -2492 369 7 7 1278 273 29 0 0 chrX 90957027 90957061 -75693235 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1278 232 281 16 0 chrX 90957656 90957720 -75692576 + ID4 SINE ID 4 68 -15 7 1278 2213 146 59 95 chrX 90958325 90958786 -75691510 - RLTR41 LTR ERV1 -2 444 1 7 1278 797 167 7 0 chrX 90958957 90959095 -75691201 + B1_Mur3 SINE Alu 10 148 -1 7 1278 455 365 76 47 chrX 90959229 90959743 -75690553 - L4 LINE RTE -1121 908 380 7 1278 185 375 0 11 chrX 90959901 90959990 -75690306 + MER5A DNA MER1_type 34 121 -68 7 1278 26 50 0 0 chrX 90960196 90960236 -75690060 + AT_rich Low_complexity Low_complexity 1 40 0 7 1278 704 177 0 0 chrX 90960532 90960662 -75689634 - B1_Mur2 SINE Alu -1 148 19 7 1278 1033 78 0 0 chrX 90960794 90960936 -75689360 + B1_Mus1 SINE Alu 7 148 0 7 1278 512 85 32 0 chrX 90960937 90961031 -75689265 + (CAAAA)n Simple_repeat Simple_repeat 1 97 0 7 1278 30 0 0 0 chrX 90961125 90961155 -75689141 + AT_rich Low_complexity Low_complexity 1 30 0 7 1278 446 300 0 0 chrX 90961200 90961310 -75688986 + PB1D10 SINE Alu 3 112 -5 7 1278 589 248 0 0 chrX 90961401 90961514 -75688782 - PB1D10 SINE Alu 0 117 5 7 1278 629 197 145 37 chrX 90961791 90962033 -75688263 - L1MA7 LINE L1 -11 6280 6013 7 1278 181 298 18 0 chrX 90962080 90962137 -75688159 - L2 LINE L2 -782 2637 2580 7 1278 216 97 0 0 chrX 90962613 90962644 -75687652 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 7 1278 210 290 41 97 chrX 90963542 90963687 -75686609 + MIRb SINE MIR 110 246 -22 7 1279 227 237 151 42 chrX 90964232 90964351 -75685945 - MIRb SINE MIR -11 257 126 7 1279 558 221 106 69 chrX 90964471 90964660 -75685636 + MER20 DNA MER1_type 22 217 -2 7 1279 1411 240 34 47 chrX 90964839 90965220 -75685076 - MTEb LTR MaLR -3 376 1 7 1279 1092 60 0 0 chrX 90966062 90966196 -75684100 + B1_Mus1 SINE Alu 5 138 -10 7 1279 216 0 0 0 chrX 90966196 90966220 -75684076 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1279 306 0 0 0 chrX 90966419 90966453 -75683843 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 1279 572 256 8 0 chrX 90966458 90966587 -75683709 - B1_Mur2 SINE Alu -16 133 4 7 1279 509 241 127 57 chrX 90966744 90966973 -75683323 - MLT1G3 LTR MaLR -242 353 109 7 1279 342 0 0 0 chrX 90966982 90967020 -75683276 + (TC)n Simple_repeat Simple_repeat 2 39 0 7 1279 1353 80 17 0 chrX 90967021 90967196 -75683100 - B2_Mm2 SINE B2 -17 178 1 7 1279 41643 8 0 9 chrX 90967227 90973448 -75676848 - L1Md_A LINE L1 0 6582 422 7 1279 606 181 131 93 chrX 90973520 90973734 -75676562 - Lx8 LINE L1 -2 7471 7250 7 1279 436 317 8 54 chrX 90975581 90975711 -75674585 + B3A SINE B2 27 150 -48 8 1279 362 229 118 9 chrX 90977317 90977427 -75672869 - PB1 SINE Alu -2 125 4 8 1279 245 268 119 68 chrX 90978579 90978755 -75671541 - MIR3 SINE MIR -8 200 16 8 1279 275 361 42 30 chrX 90978833 90979024 -75671272 - MIRb SINE MIR -1 261 66 8 1279 515 241 41 3 chrX 90979372 90979521 -75670775 - MIRc SINE MIR -36 232 83 8 1279 391 274 109 22 chrX 90980732 90980870 -75669426 - Lx6 LINE L1 -81 7379 7230 8 1279 369 299 91 72 chrX 90980901 90981110 -75669186 - RMER15 LTR ERVL -16 559 347 8 1279 330 307 19 57 chrX 90981799 90981958 -75668338 - B4A SINE B4 -6 286 134 8 1279 348 322 20 34 chrX 90981967 90982115 -75668181 + B4A SINE B4 27 172 -120 8 1279 395 231 44 0 chrX 90983522 90983613 -75666683 + B1F SINE Alu 49 143 -6 8 1279 241 282 141 0 chrX 90983784 90983862 -75666434 - MLT1F LTR MaLR -459 89 1 8 1279 198 103 0 0 chrX 90983972 90984001 -75666295 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 8 1279 717 12 0 0 chrX 90984053 90984135 -75666161 + (TTC)n Simple_repeat Simple_repeat 2 83 0 8 1279 1277 118 0 26 chrX 90984367 90984558 -75665738 - B2_Mm1t SINE B2 -6 187 2 8 1279 1842 265 47 41 chrX 90985516 90985574 -75664722 - L1MB3 LINE L1 0 6183 6131 8 1279 308 262 38 0 chrX 90985574 90985654 -75664642 - ID4_ SINE ID 0 83 1 8 1279 1842 265 47 41 chrX 90985654 90986275 -75664021 - L1MB3 LINE L1 -53 6130 5500 8 1279 304 22 44 0 chrX 90986737 90986782 -75663514 + (CCCCAG)n Simple_repeat Simple_repeat 5 51 0 8 1279 345 302 47 0 chrX 90986827 90986956 -75663340 + MIR SINE MIR 94 228 -34 8 1279 633 320 62 0 chrX 90988261 90988517 -75661779 - MER2 DNA MER2_type 0 345 74 8 1279 340 264 18 18 chrX 90988594 90988706 -75661590 + PB1D10 SINE Alu 6 117 0 8 1279 747 173 15 0 chrX 90988709 90988842 -75661454 + B1_Mur2 SINE Alu 9 143 -6 8 1279 258 319 0 0 chrX 90988847 90988919 -75661377 + ID4_ SINE ID 1 72 -11 8 1279 666 208 123 0 chrX 90989135 90989289 -75661007 + B3 SINE B2 3 175 -41 8 1279 258 182 0 0 chrX 90989629 90989673 -75660623 + MamSINE1 SINE tRNA 6 49 -241 8 1279 536 256 32 0 chrX 90989841 90989966 -75660330 + ID_B1 SINE B4 95 223 -1 8 1279 301 299 70 25 chrX 90990015 90990173 -75660123 + L2a LINE L2 2466 2630 -789 8 1279 240 276 26 13 chrX 90990291 90990368 -75659928 + L1ME1 LINE L1 6053 6130 -49 8 1279 228 346 116 46 chrX 90990413 90990716 -75659580 + L2a LINE L2 2659 2982 -437 8 1279 194 293 17 0 chrX 90990968 90991026 -75659270 + L2a LINE L2 3101 3159 -267 8 1279 316 141 215 11 chrX 90991073 90991166 -75659130 - PB1D7 SINE Alu -5 115 4 8 1279 486 0 0 0 chrX 90994914 90994968 -75655328 + (GGAA)n Simple_repeat Simple_repeat 4 57 0 8 1279 569 218 174 36 chrX 90995705 90995900 -75654396 - B4 SINE B4 -1 291 70 8 1279 494 216 39 0 chrX 90996092 90996194 -75654102 + B4A SINE B4 183 288 -4 8 1279 996 262 55 2 chrX 90996249 90996576 -75653720 + L1_Mur3 LINE L1 5238 5610 -690 8 1279 213 269 77 0 chrX 90996951 90997003 -75653293 - B4A SINE B4 -145 147 92 8 1279 389 286 50 16 chrX 90997349 90997470 -75652826 + B1F SINE Alu 22 146 -3 8 1279 799 270 9 4 chrX 90998077 90998290 -75652006 + B3A SINE B2 1 213 -3 8 1279 621 272 0 0 chrX 90999565 90999701 -75650595 - ID_B1 SINE B4 -8 216 81 8 1279 27 0 0 0 chrX 91000115 91000142 -75650154 + AT_rich Low_complexity Low_complexity 1 27 0 1 1279 243 0 0 0 chrX 91000943 91000970 -75649326 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1279 364 237 0 0 chrX 91001512 91001588 -75648708 - ID4 SINE ID -4 79 4 3 1279 601 149 16 58 chrX 91001739 91001860 -75648436 - PB1D9 SINE Alu -3 117 2 4 1279 485 281 19 19 chrX 91004748 91004904 -75645392 - RSINE1 SINE B4 -7 158 3 5 1279 371 281 19 10 chrX 91005275 91005379 -75644917 + L2a LINE L2 3289 3393 -33 6 1279 209 330 32 0 chrX 91005804 91005898 -75644398 + CT-rich Low_complexity Low_complexity 3 99 0 7 1279 256 330 93 22 chrX 91007571 91007803 -75642493 + MIRc SINE MIR 6 251 -17 8 1279 242 315 21 73 chrX 91008066 91008162 -75642134 - L2a LINE L2 -5 3421 3331 9 1279 381 243 78 0 chrX 91009126 91009229 -75641067 - PB1D10 SINE Alu -6 111 1 1 1279 872 137 8 0 chrX 91009501 91009632 -75640664 + B1_Mur4 SINE Alu 1 132 -18 1 1279 746 206 14 7 chrX 91010798 91010945 -75639351 + B1_Mur3 SINE Alu 1 148 -1 1 1279 261 0 0 0 chrX 91011267 91011296 -75639000 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1279 497 196 0 42 chrX 91011376 91011472 -75638824 - B1_Mur2 SINE Alu -18 131 40 1 1279 243 252 165 16 chrX 91012219 91012340 -75637956 + L1MC4 LINE L1 6755 6893 -1149 1 1279 1140 64 0 0 chrX 91012343 91012484 -75637812 - B1_Mus2 SINE Alu -6 141 1 1 1279 1007 169 119 0 chrX 91012977 91013178 -75637118 + URR1B DNA MER1_type 1 225 0 1 1279 830 305 48 2 chrX 91013457 91013851 -75636445 - L1MB4 LINE L1 -2 6178 5767 1 1279 357 171 0 73 chrX 91014791 91014873 -75635423 + ID4_ SINE ID 2 77 -6 1 1279 549 183 169 32 chrX 91015129 91015253 -75635043 - B1_Mur1 SINE Alu -8 141 1 2 1279 376 266 0 0 chrX 91015285 91015364 -75634932 - ID4_ SINE ID -4 79 1 2 1279 21351 137 38 18 chrX 91015928 91016794 -75633502 + Lx4B LINE L1 597 1484 -4393 2 1279 2892 71 0 26 chrX 91016794 91017184 -75633112 + L1Md_F2 LINE L1 6191 6570 -12 2 1279 21351 129 68 53 chrX 91017184 91017798 -75632498 + Lx4B LINE L1 1485 2064 -3813 2 1279 427 17 16 16 chrX 91017798 91017859 -75632437 + (CA)n Simple_repeat Simple_repeat 1 61 0 2 1279 21351 126 61 44 chrX 91017859 91022025 -75628271 + Lx4B LINE L1 2065 6350 -708 2 1279 989 116 51 11 chrX 91022225 91022400 -75627896 - B2_Mm2 SINE B2 -10 185 4 2 1279 21 0 0 0 chrX 91022995 91023016 -75627280 + AT_rich Low_complexity Low_complexity 1 21 0 2 1279 948 245 14 27 chrX 91023066 91023288 -75627008 - ID_B1 SINE B4 -5 219 1 2 1279 314 307 51 74 chrX 91023349 91023525 -75626771 + Lx9 LINE L1 7010 7181 -463 2 1279 618 49 0 0 chrX 91023525 91023607 -75626689 + (TTCC)n Simple_repeat Simple_repeat 4 85 0 2 1279 1559 47 0 16 chrX 91023689 91023883 -75626413 + B2_Mm1a SINE B2 1 191 -2 3 1279 730 97 0 0 chrX 91024069 91024172 -75626124 - PB1D9 SINE Alu -5 115 13 3 1279 295 306 10 39 chrX 91024428 91024530 -75625766 + RSINE1 SINE B4 48 146 -19 3 1279 287 257 157 42 chrX 91024853 91025044 -75625252 + ID_B1 SINE B4 4 216 -8 3 1279 879 214 31 0 chrX 91025248 91025407 -75624889 + B3 SINE B2 4 167 -49 3 1279 323 89 18 0 chrX 91025407 91025463 -75624833 + (CATA)n Simple_repeat Simple_repeat 4 60 0 3 1279 26 0 0 0 chrX 91026336 91026362 -75623934 + AT_rich Low_complexity Low_complexity 1 26 0 3 1279 466 176 0 0 chrX 91027665 91027739 -75622557 - ID4_ SINE ID -9 74 1 3 1279 481 259 0 0 chrX 91028017 91028125 -75622171 - PB1D9 SINE Alu -10 110 3 3 1279 296 371 97 32 chrX 91030452 91030700 -75619596 + ORR1E LTR MaLR 1 264 -95 3 1279 261 0 0 0 chrX 91030778 91030807 -75619489 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1279 1208 43 0 0 chrX 91030997 91031138 -75619158 - B1_Mm SINE Alu -6 141 1 4 1279 224 353 14 29 chrX 91031236 91031250 -75619046 - ID4_ SINE ID -2 81 13 4 1279 235 321 18 0 chrX 91031250 91031306 -75618990 - ID SINE ID -155 69 13 4 1279 942 272 133 35 chrX 91031718 91032034 -75618262 + ORR1E LTR MaLR 7 353 -6 4 1279 1402 241 22 22 chrX 91032875 91033240 -75617056 + MLT1A0 LTR MaLR 1 365 0 4 1279 1090 219 10 0 chrX 91034694 91034899 -75615397 + B3 SINE B2 2 208 -8 4 1279 251 234 82 41 chrX 91035086 91035184 -75615112 + L1MB8 LINE L1 6039 6140 -38 4 1279 530 242 70 52 chrX 91035199 91035363 -75614933 - L1MB7 LINE L1 -149 6035 5868 4 1279 1196 243 43 83 chrX 91035363 91035758 -75614538 + MTE2a LTR MaLR 1 379 0 4 1279 530 242 70 52 chrX 91035758 91035806 -75614490 - L1MB7 LINE L1 -317 5867 5819 4 1279 462 36 0 0 chrX 91036525 91036581 -75613715 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 1279 316 291 13 0 chrX 91037176 91037255 -75613041 + ID4_ SINE ID 1 80 -3 5 1279 597 219 0 54 chrX 91037341 91037475 -75612821 + B1_Mur1 SINE Alu 2 125 -22 5 1279 1675 21 0 0 chrX 91037620 91037812 -75612484 - B2_Mm1a SINE B2 0 193 2 5 1279 341 328 24 81 chrX 91038395 91038519 -75611777 - B3A SINE B2 0 198 2 5 1279 400 207 0 35 chrX 91038519 91038604 -75611692 - B4 SINE B4 -209 83 2 5 1279 1003 173 36 55 chrX 91038614 91038834 -75611462 - B3 SINE B2 0 216 1 5 1279 739 206 41 7 chrX 91039007 91039154 -75611142 + B3 SINE B2 64 215 -1 5 1279 593 267 15 0 chrX 91039197 91039332 -75610964 + ID_B1 SINE B4 82 218 -6 5 1279 235 160 55 91 chrX 91039288 91039343 -75610953 + PB1D7 SINE Alu 68 120 0 5 1279 324 0 0 0 chrX 91040718 91040754 -75609542 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1279 298 288 58 43 chrX 91040840 91040978 -75609318 + B1F1 SINE Alu 10 149 0 6 1279 250 316 92 0 chrX 91040979 91041055 -75609241 + ID4_ SINE ID 1 83 0 6 1279 909 171 0 0 chrX 91041285 91041544 -75608752 + (TG)n Simple_repeat Simple_repeat 1 259 0 6 1279 534 189 247 12 chrX 91041722 91041767 -75608529 + Lx6 LINE L1 6682 6737 -723 6 1279 279 0 0 0 chrX 91041767 91041798 -75608498 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 6 1279 1496 234 152 13 chrX 91041798 91042365 -75607931 + Lx6 LINE L1 6455 7458 -2 6 1279 407 284 35 69 chrX 91042379 91042523 -75607773 + ID_B1 SINE B4 84 222 -2 6 1279 331 218 13 13 chrX 91042533 91042612 -75607684 + ID4_ SINE ID 3 81 -2 6 1279 258 313 182 43 chrX 91042731 91042918 -75607378 + ORR1E LTR MaLR 53 265 -94 6 1279 326 308 136 43 chrX 91043488 91043746 -75606550 - L1MC5 LINE L1 -20 7941 7660 6 1279 794 170 73 34 chrX 91043797 91043989 -75606307 - B3 SINE B2 0 195 1 7 1279 755 209 114 31 chrX 91044016 91044209 -75606087 - B3 SINE B2 -6 210 2 7 1279 868 178 0 7 chrX 91044270 91044417 -75605879 - B1_Mur3 SINE Alu -1 148 3 7 1279 22 0 0 0 chrX 91044425 91044447 -75605849 + AT_rich Low_complexity Low_complexity 1 22 0 7 1279 643 165 115 8 chrX 91046475 91046597 -75603699 - B1_Mus1 SINE Alu -13 135 1 7 1279 1143 83 0 0 chrX 91046664 91046808 -75603488 + B1_Mus1 SINE Alu 2 145 -3 7 1279 243 0 0 0 chrX 91046808 91046835 -75603461 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 7 1279 660 64 73 0 chrX 91047266 91047375 -75602921 - L1_Mus4 LINE L1 0 6636 6520 7 1279 22 0 0 0 chrX 91047996 91048018 -75602278 + AT_rich Low_complexity Low_complexity 1 22 0 7 1279 828 274 26 35 chrX 91048185 91048416 -75601880 + B4A SINE B4 63 291 -1 7 1279 341 244 0 40 chrX 91048428 91048684 -75601612 + (CA)n Simple_repeat Simple_repeat 1 245 0 8 1279 350 219 0 53 chrX 91048697 91048968 -75601328 + (CA)n Simple_repeat Simple_repeat 1 256 0 8 1279 289 230 0 58 chrX 91048981 91049170 -75601126 + (CA)n Simple_repeat Simple_repeat 1 178 0 8 1279 269 254 35 23 chrX 91049179 91049352 -75600944 + (CATATA)n Simple_repeat Simple_repeat 6 180 0 8 1279 317 322 72 26 chrX 91049957 91050110 -75600186 + RSINE1 SINE B4 5 164 -1 8 1279 1002 91 42 0 chrX 91050255 91050398 -75599898 + B1_Mur4 SINE Alu 2 150 0 8 1279 189 107 0 0 chrX 91050425 91050453 -75599843 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 1279 853 136 20 48 chrX 91050713 91050860 -75599436 + B1_Mur4 SINE Alu 2 144 -6 8 1279 335 197 0 0 chrX 91051067 91051128 -75599168 + B1_Mur3 SINE Alu 1 61 -88 8 1279 3331 155 106 136 chrX 91051844 91052762 -75597534 + RMER19B LTR ERVK 1 890 -12 8 1279 222 37 0 0 chrX 91053388 91053415 -75596881 + (TA)n Simple_repeat Simple_repeat 2 28 0 8 1279 822 287 39 27 chrX 91053854 91054112 -75596184 - B4A SINE B4 -30 262 2 8 1279 599 282 7 0 chrX 91054824 91054966 -75595330 - B1_Mur1 SINE Alu -5 144 2 9 1279 259 303 42 67 chrX 91055382 91055448 -75594848 + L1MC4 LINE L1 7628 7689 -353 9 1279 1121 77 14 0 chrX 91055448 91055591 -75594705 - B1_Mus2 SINE Alu -1 146 2 9 1279 259 303 42 67 chrX 91055591 91055807 -75594489 + L1MC4 LINE L1 7690 7903 -139 9 1279 230 218 18 18 chrX 91056457 91056513 -75593783 + (TATATG)n Simple_repeat Simple_repeat 2 57 0 9 1279 378 182 79 35 chrX 91056556 91056670 -75593626 + L1MC4 LINE L1 7923 8041 -1 9 1279 306 235 61 12 chrX 91056799 91056881 -75593415 + MER21B LTR ERV1 13 98 -765 9 1279 961 310 91 36 chrX 91057048 91057486 -75592810 + MER21B LTR ERV1 289 750 -113 9 1279 221 100 0 48 chrX 91057835 91057877 -75592419 + (TTTTC)n Simple_repeat Simple_repeat 2 41 0 9 1279 1175 54 0 20 chrX 91057880 91058030 -75592266 - B1_Mus1 SINE Alu 0 148 2 9 1279 586 238 101 25 chrX 91058776 91058974 -75591322 + ID_B1 SINE B4 2 214 -10 9 1279 326 281 111 18 chrX 91060100 91060325 -75589971 + L1MA6 LINE L1 5998 6243 -57 9 1279 33 25 0 0 chrX 91061373 91061413 -75588883 + AT_rich Low_complexity Low_complexity 1 40 0 9 1279 21 71 0 0 chrX 91061477 91061519 -75588777 + AT_rich Low_complexity Low_complexity 1 42 0 1 1279 684 273 79 110 chrX 91061618 91062045 -75588251 + MER31B LTR ERV1 20 433 -33 1 1279 500 165 0 10 chrX 91062045 91062133 -75588163 - ORR1A2 LTR MaLR 0 374 288 1 1279 719 126 164 17 chrX 91062133 91062310 -75587986 + ORR1A2 LTR MaLR 1 203 -124 1 1279 1179 127 8 120 chrX 91062318 91062575 -75587721 - ORR1A2 LTR MaLR -76 298 51 1 1279 363 289 183 21 chrX 91062832 91063122 -75587174 - MER46C DNA MER2_type 0 338 2 1 1279 429 208 37 19 chrX 91065400 91065508 -75584788 - URR1B DNA MER1_type -6 219 110 1 1279 1151 42 42 0 chrX 91066020 91066162 -75584134 + B1_Mus1 SINE Alu 1 148 0 1 1279 216 0 0 0 chrX 91066163 91066187 -75584109 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 1279 644 198 31 23 chrX 91067257 91067386 -75582910 + B1_Mur3 SINE Alu 6 135 -14 1 1279 261 57 0 0 chrX 91067393 91067428 -75582868 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1279 536 295 35 35 chrX 91068098 91068295 -75582001 - MER58B DNA MER1_type 0 341 145 1 1279 263 276 72 81 chrX 91068305 91068514 -75581782 + L1MC1 LINE L1 6127 6333 0 1 1279 680 266 114 7 chrX 91068791 91069097 -75581199 + L1MA4 LINE L1 5526 5864 -436 1 1279 21 0 0 0 chrX 91070798 91070819 -75579477 + AT_rich Low_complexity Low_complexity 1 21 0 1 1279 353 263 0 13 chrX 91070915 91070992 -75579304 + ID4 SINE ID 6 81 -2 1 1279 878 259 59 83 chrX 91071180 91071268 -75579028 + B4 SINE B4 10 83 -209 1 1279 737 193 7 14 chrX 91071268 91071415 -75578881 + B1_Mus1 SINE Alu 1 146 -2 1 1279 878 259 59 83 chrX 91071415 91071616 -75578680 + B4 SINE B4 84 292 0 1 1279 276 204 19 49 chrX 91071637 91071745 -75578551 - Charlie5 DNA MER1_type -2498 126 25 1 1279 811 258 24 14 chrX 91071798 91072010 -75578286 + B3 SINE B2 1 214 -2 1 1279 386 254 168 82 chrX 91072018 91072382 -75577914 + L1MC4 LINE L1 2049 2443 -3772 1 1279 1185 75 0 0 chrX 91072606 91072753 -75577543 + B1_Mus1 SINE Alu 2 148 0 1 1279 1052 211 39 0 chrX 91072948 91073156 -75577140 + B3 SINE B2 1 216 0 1 1279 425 271 0 10 chrX 91073364 91073461 -75576835 + B1F SINE Alu 9 104 -45 1 1279 333 308 47 0 chrX 91073546 91073653 -75576643 + PB1D10 SINE Alu 1 112 -5 1 1279 474 196 7 15 chrX 91073665 91073793 -75576503 + B1_Mus2 SINE Alu 1 132 -17 1 1279 329 0 24 0 chrX 91073866 91073907 -75576389 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1279 274 306 51 83 chrX 91074589 91074665 -75575631 + L1MC4 LINE L1 5628 5696 -2254 1 1279 1104 72 0 0 chrX 91074665 91074804 -75575492 + B1_Mus1 SINE Alu 1 139 -9 1 1279 235 49 49 0 chrX 91074804 91074845 -75575451 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 1279 274 306 51 83 chrX 91074845 91074924 -75575372 + L1MC4 LINE L1 5697 5778 -2172 1 1279 400 286 42 0 chrX 91075851 91075970 -75574326 + RSINE1 SINE B4 38 161 -4 1 1279 1197 61 0 0 chrX 91078325 91078472 -75571824 + B1_Mus2 SINE Alu 1 147 0 1 1279 255 192 0 0 chrX 91078472 91078550 -75571746 + A-rich Low_complexity Low_complexity 1 78 0 1 1279 257 306 21 8 chrX 91079464 91079617 -75570679 + MIR SINE MIR 42 200 -68 1 1279 2230 108 22 11 chrX 91079802 91080157 -75570139 + ORR1B2 LTR MaLR 1 359 -8 1 1279 426 244 0 0 chrX 91080182 91080268 -75570028 + MER5A DNA MER1_type 40 125 -64 1 1279 472 274 45 7 chrX 91080274 91080428 -75569868 + MLT1F1 LTR MaLR 19 178 -391 1 1279 387 266 46 15 chrX 91080441 91080571 -75569725 + L1MC3 LINE L1 7461 7594 -191 1 1279 357 269 28 9 chrX 91080607 91080716 -75569580 + CT-rich Low_complexity Low_complexity 2 112 0 1 1279 329 345 36 63 chrX 91080718 91080941 -75569355 + MLT1F1 LTR MaLR 344 560 0 1 1279 664 210 0 156 chrX 91081229 91081268 -75569028 + B3A SINE B2 1 39 -159 1 1279 1224 117 33 0 chrX 91081268 91081448 -75568848 + B2_Mm2 SINE B2 1 186 -9 1 1279 664 210 0 156 chrX 91081448 91081600 -75568696 + B3A SINE B2 40 162 -36 1 1279 377 250 0 0 chrX 91081858 91081934 -75568362 - B1_Mus2 SINE Alu -69 78 3 1 1279 1163 170 13 112 chrX 91082658 91082743 -75567553 - RMER1C Other Other -118 1224 1148 1 1279 898 151 218 11 chrX 91082743 91082917 -75567379 + B3 SINE B2 1 210 -6 1 1279 981 135 21 0 chrX 91082926 91083067 -75567229 + B1_Mus1 SINE Alu 5 148 0 1 1279 1163 170 13 112 chrX 91083067 91083283 -75567013 - RMER1C Other Other -198 1144 944 1 1279 225 253 93 0 chrX 91083298 91083373 -75566923 + MamGypLTR1b LTR Gypsy 695 776 -6 1 1279 808 212 89 11 chrX 91083411 91083602 -75566694 + B3 SINE B2 5 210 -6 1 1279 853 239 6 0 chrX 91083693 91083873 -75566423 + B3A SINE B2 2 182 -16 1 1279 211 191 43 0 chrX 91084056 91084103 -75566193 + MIRm SINE MIR 103 151 -125 1 1279 393 239 8 127 chrX 91084197 91084331 -75565965 + MT2B LTR ERVL 147 264 -337 1 1279 879 148 7 0 chrX 91084224 91084366 -75565930 + B1_Mus1 SINE Alu 6 148 0 1 1279 291 293 52 91 chrX 91084233 91084387 -75565909 + B4A SINE B4 99 246 -46 1 1279 561 68 0 0 chrX 91084387 91084461 -75565835 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 1 1279 909 242 24 63 chrX 91084827 91085162 -75565134 + MER33 DNA MER1_type 2 323 -1 1 1279 382 326 56 7 chrX 91085628 91085770 -75564526 + B1_Mur1 SINE Alu 1 149 0 1 1279 726 194 20 14 chrX 91085838 91085984 -75564312 - B1_Mm SINE Alu 0 147 1 1 1279 706 281 83 45 chrX 91086396 91086661 -75563635 - B4A SINE B4 -14 278 4 1 1279 228 295 16 0 chrX 91087094 91087155 -75563141 + ID4_ SINE ID 2 63 -20 1 1279 215 286 0 0 chrX 91087188 91087244 -75563052 - BC1_Mm scRNA scRNA -53 99 44 1 1279 404 307 22 14 chrX 91087627 91087766 -75562530 + B1F SINE Alu 9 148 -1 1 1279 838 163 7 0 chrX 91087775 91087910 -75562386 + B1_Mur1 SINE Alu 14 149 0 1 1279 412 243 0 0 chrX 91087925 91087999 -75562297 + ID4 SINE ID 3 76 -7 1 1279 282 286 0 0 chrX 91088123 91088186 -75562110 + polypyrimidine Low_complexity Low_complexity 3 65 0 1 1279 445 187 43 11 chrX 91088476 91088568 -75561728 - B1_Mur1 SINE Alu -5 144 50 1 1279 794 221 7 0 chrX 91088600 91088749 -75561547 + B3A SINE B2 1 150 -48 1 1279 345 47 0 0 chrX 91088752 91088795 -75561501 + (CCA)n Simple_repeat Simple_repeat 3 45 0 1 1279 1072 269 45 8 chrX 91089000 91089247 -75561049 - B4 SINE B4 -35 257 2 1 1279 572 121 0 31 chrX 91089392 91089520 -75560776 + A-rich Low_complexity Low_complexity 1 124 0 1 1279 230 272 65 36 chrX 91089724 91089825 -75560471 + MIRc SINE MIR 63 167 -41 1 1279 427 291 50 69 chrX 91091025 91091184 -75559112 + MLT1A0 LTR MaLR 113 268 -97 1 1279 1809 186 116 135 chrX 91091185 91091918 -75558378 + RMER6D LTR ERVK 2 720 0 1 1279 371 227 23 0 chrX 91091918 91092006 -75558290 + MLT1A0 LTR MaLR 264 353 -12 1 1279 225 94 0 0 chrX 91092008 91092040 -75558256 + (CAGAGA)n Simple_repeat Simple_repeat 3 34 0 1 1279 1376 109 31 9 chrX 91092112 91092334 -75557962 - ORR1A4 LTR MaLR 0 329 103 1 1279 40 37 0 0 chrX 91092768 91092822 -75557474 + AT_rich Low_complexity Low_complexity 1 54 0 1 1279 4923 56 14 0 chrX 91092822 91093452 -75556844 - L1_Mus3 LINE L1 -11 6627 5989 1 1279 299 29 0 0 chrX 91093452 91093487 -75556809 - L1_Mus3 LINE L1 -719 5919 5885 1 1279 474 168 19 38 chrX 91093880 91093985 -75556311 - MLT1D LTR MaLR 0 505 403 1 1279 282 204 66 107 chrX 91094016 91094137 -75556159 + L1MA7 LINE L1 6024 6139 -161 1 1279 794 194 47 62 chrX 91094153 91094345 -75555951 + 7SLRNA srpRNA srpRNA 28 216 -98 1 1279 330 175 308 0 chrX 91094371 91094491 -75555805 + L1MA7 LINE L1 6144 6300 0 1 1279 1472 186 156 30 chrX 91094552 91094923 -75555373 - MTC LTR MaLR 0 421 4 1 1280 564 271 96 5 chrX 91095234 91095442 -75554854 - MLT1D LTR MaLR -258 247 21 1 1280 287 186 16 18 chrX 91095687 91095755 -75554541 + ORR1E LTR MaLR 1 67 -303 1 1280 612 239 14 14 chrX 91096028 91096168 -75554128 + MLT1A1 LTR MaLR 267 406 -2 1 1280 498 246 0 36 chrX 91096667 91096806 -75553490 + MLT1A1 LTR MaLR 275 408 0 1 1280 700 240 68 53 chrX 91098014 91098221 -75552075 + B3 SINE B2 1 210 -6 1 1280 441 291 14 56 chrX 91098241 91098383 -75551913 + ID_B1 SINE B4 78 213 -11 1 1280 631 199 7 111 chrX 91098260 91098413 -75551883 + B1_Mus2 SINE Alu 9 145 -2 1 1280 1754 230 11 11 chrX 91098463 91098841 -75551455 + MTE2b LTR MaLR 2 379 0 1 1280 410 317 24 0 chrX 91098917 91099040 -75551256 - B1F SINE Alu -5 144 19 1 1280 261 0 0 0 chrX 91099377 91099406 -75550890 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1280 891 309 74 23 chrX 91100291 91100722 -75549574 - MER20B DNA MER1_type -20 763 311 1 1280 422 279 42 2 chrX 91100905 91101023 -75549273 + PB1D10 SINE Alu 1 123 -26 1 1280 3932 201 102 17 chrX 91101321 91102550 -75547746 - RMER1A Other Other -16 1014 1 1 1280 517 213 87 14 chrX 91102718 91102856 -75547440 - B1_Mur4 SINE Alu 0 150 3 1 1280 304 307 23 51 chrX 91102877 91103052 -75547244 - B3A SINE B2 -2 196 27 1 1280 1057 200 4 44 chrX 91103135 91103360 -75546936 - B3 SINE B2 0 216 1 1 1280 221 0 0 33 chrX 91103450 91103480 -75546816 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1280 198 184 40 0 chrX 91103892 91103968 -75546328 + (TA)n Simple_repeat Simple_repeat 2 80 0 1 1280 276 30 0 0 chrX 91103971 91104004 -75546292 + (TAGA)n Simple_repeat Simple_repeat 4 36 0 1 1280 756 223 20 0 chrX 91104121 91104269 -75546027 + B3A SINE B2 1 151 -47 1 1280 488 196 339 15 chrX 91104524 91104773 -75545523 + ORR1D2 LTR MaLR 2 332 -38 1 1280 306 328 23 30 chrX 91104931 91105063 -75545233 - LTR16C LTR ERVL -50 439 309 1 1280 1045 118 6 6 chrX 91105234 91105413 -75544883 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1 1280 189 0 0 0 chrX 91105413 91105433 -75544863 + (TCTG)n Simple_repeat Simple_repeat 2 22 0 1 1280 1111 278 18 4 chrX 91105457 91105731 -75544565 - B4 SINE B4 0 292 15 2 1280 354 250 67 9 chrX 91105795 91105900 -75544396 + PB1D10 SINE Alu 6 116 -1 2 1280 519 295 7 41 chrX 91106111 91106256 -75544040 - ID_B1 SINE B4 -6 218 79 2 1280 369 0 0 0 chrX 91106357 91106398 -75543898 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 2 1280 877 137 0 28 chrX 91106398 91106530 -75543766 - B1_Mur4 SINE Alu -13 137 6 2 1280 314 255 73 87 chrX 91106430 91106580 -75543716 - MT2B LTR ERVL -344 257 110 2 1280 232 290 87 0 chrX 91107235 91107304 -75542992 - B4A SINE B4 -130 162 88 2 1280 238 328 213 0 chrX 91107321 91107443 -75542853 - MER91A DNA Tip100 -44 152 5 2 1280 491 278 30 12 chrX 91107483 91107647 -75542649 + B3A SINE B2 1 167 -31 2 1280 269 295 63 0 chrX 91108189 91108284 -75542012 - LTR33B LTR ERVL -343 160 60 2 1280 336 250 0 33 chrX 91109493 91109584 -75540712 + MLT1A1 LTR MaLR 309 396 -12 2 1280 564 206 36 29 chrX 91109783 91109950 -75540346 + B3 SINE B2 6 164 -31 2 1280 279 323 44 22 chrX 91111525 91111661 -75538635 + MER5B DNA MER1_type 18 156 -22 2 1280 312 299 97 0 chrX 91112047 91112191 -75538105 + L1ME3A LINE L1 6008 6165 -8 2 1280 339 184 53 0 chrX 91112192 91112268 -75538028 - B3 SINE B2 0 216 137 2 1280 751 241 50 41 chrX 91112413 91112655 -75537641 - L1MB8 LINE L1 -6 6172 5929 2 1280 246 290 0 0 chrX 91112766 91112835 -75537461 - RMER15 LTR ERVL -104 471 403 2 1280 471 138 57 11 chrX 91112842 91112930 -75537366 + Lx9 LINE L1 7059 7150 -494 2 1280 567 214 179 14 chrX 91112940 91113158 -75537138 + Lx9 LINE L1 7370 7623 -21 2 1280 1215 56 6 0 chrX 91113181 91113343 -75536953 + B2_Mm2 SINE B2 1 163 -32 2 1280 705 238 10 60 chrX 91113346 91113547 -75536749 + B3 SINE B2 26 216 0 2 1280 788 240 5 32 chrX 91113581 91113766 -75536530 - Lx8 LINE L1 -235 7238 7059 2 1280 1710 235 83 20 chrX 91113765 91114260 -75536036 - L1MB5 LINE L1 -236 5938 5413 2 1280 197 182 18 0 chrX 91114284 91114339 -75535957 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 1280 205 149 21 21 chrX 91114351 91114399 -75535897 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 2 1280 511 279 48 30 chrX 91114475 91114635 -75535661 - B3A SINE B2 0 198 36 2 1280 2091 128 42 3 chrX 91114635 91114972 -75535324 + MTC LTR MaLR 1 350 -71 2 1280 180 0 0 0 chrX 91115057 91115077 -75535219 + (CCA)n Simple_repeat Simple_repeat 1 20 0 2 1280 1009 189 127 9 chrX 91115752 91116075 -75534221 + MTD LTR MaLR 21 403 -16 2 1280 249 256 24 60 chrX 91116075 91116158 -75534138 + ID_B1 SINE B4 13 92 -132 2 1280 6468 57 7 26 chrX 91116303 91117148 -75533148 - L1_Mus2 LINE L1 0 6566 5738 2 1280 306 324 82 14 chrX 91117193 91117340 -75532956 - LTR16C LTR ERVL -6 483 327 2 1280 640 181 0 45 chrX 91117370 91117503 -75532793 + (CAGAGA)n Simple_repeat Simple_repeat 2 128 0 2 1280 562 121 20 0 chrX 91117503 91117602 -75532694 + B1_Mus2 SINE Alu 42 142 -5 2 1280 1930 188 70 3 chrX 91117685 91118054 -75532242 + ORR1B1 LTR MaLR 1 394 0 2 1280 266 199 4 3 chrX 91118205 91118279 -75532017 - MIRm SINE MIR -101 167 94 2 1280 455 279 72 24 chrX 91118825 91118950 -75531346 + RSINE1 SINE B4 26 156 -9 2 1280 584 62 0 12 chrX 91118950 91119032 -75531264 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 2 1280 366 235 12 0 chrX 91120269 91120354 -75529942 - MER2 DNA MER2_type -5 340 255 2 1280 596 255 104 21 chrX 91120493 91120733 -75529563 - MER2 DNA MER2_type -82 263 4 2 1280 181 281 18 0 chrX 91120794 91120851 -75529445 - MIR SINE MIR -138 124 67 2 1280 2311 247 51 27 chrX 91121631 91122373 -75527923 + L1MB2 LINE L1 4231 4990 -1150 2 1280 2112 245 116 32 chrX 91122714 91123699 -75526597 + L1MB2 LINE L1 4996 6063 -108 2 1280 495 14 27 14 chrX 91123760 91123833 -75526463 + (GTTTG)n Simple_repeat Simple_repeat 2 75 0 2 1280 1104 49 0 65 chrX 91123833 91123976 -75526320 - B1_Mus1 SINE Alu -9 139 5 2 1280 297 68 0 0 chrX 91124013 91124057 -75526239 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1280 610 333 12 6 chrX 91124059 91124222 -75526074 - B3A SINE B2 -30 168 5 2 1280 198 103 0 0 chrX 91124279 91124308 -75525988 + (ATG)n Simple_repeat Simple_repeat 2 30 0 2 1280 586 271 16 0 chrX 91124309 91124431 -75525865 + B1F SINE Alu 1 124 -25 2 1280 546 57 0 0 chrX 91124441 91124511 -75525785 + (TA)n Simple_repeat Simple_repeat 2 71 0 2 1280 468 35 0 0 chrX 91124511 91124568 -75525728 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1280 3077 30 0 3 chrX 91124777 91125139 -75525157 - L1Md_F3 LINE L1 -12 6572 6212 2 1280 2734 107 18 5 chrX 91125366 91125753 -75524543 - ORR1B1 LTR MaLR -2 392 1 2 1280 369 0 0 0 chrX 91126193 91126234 -75524062 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1280 4275 163 24 33 chrX 91126576 91127415 -75522881 - RMER13B LTR ERVK -66 842 12 2 1280 3520 25 2 0 chrX 91127464 91127859 -75522437 + MTA_Mm LTR MaLR 1 396 0 2 1280 414 0 0 0 chrX 91127916 91127962 -75522334 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1280 1147 209 208 69 chrX 91127996 91128428 -75521868 + RMER19C LTR ERVK 1 535 -202 2 1280 2014 244 36 2 chrX 91128751 91129228 -75521068 + MuRRS4-int LTR ERV1 3533 4025 -1038 2 1280 1111 86 12 0 chrX 91129424 91129586 -75520710 + B2_Mm1t SINE B2 2 165 -28 2 1280 399 87 398 0 chrX 91129623 91129726 -75520570 + B2_Mm2 SINE B2 47 190 -5 2 1280 692 314 11 8 chrX 91130398 91130664 -75519632 + RLTR6-int LTR ERV1 7447 7713 -65 2 1280 2033 94 170 0 chrX 91130746 91131128 -75519168 + RLTR47_MM LTR ERV1 2 448 -84 2 1280 228 35 0 0 chrX 91131131 91131160 -75519136 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2 1280 7141 120 51 15 chrX 91131164 91132320 -75517976 + Lx2 LINE L1 5800 6997 0 2 1280 2368 138 13 15 chrX 91132632 91133028 -75517268 - MTC LTR MaLR -13 408 14 2 1280 297 221 17 0 chrX 91133523 91133599 -75516697 + B1_Mur2 SINE Alu 34 115 -5 2 1280 330 107 0 0 chrX 91134240 91134296 -75516000 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1280 189 0 0 0 chrX 91135671 91135692 -75514604 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1280 519 250 0 0 chrX 91138577 91138685 -75511611 + ID_B1 SINE B4 110 217 -7 2 1280 258 32 0 0 chrX 91138756 91138787 -75511509 + (TCCCC)n Simple_repeat Simple_repeat 3 33 0 2 1280 346 237 78 9 chrX 91138787 91138902 -75511394 + LTR16A1 LTR ERVL 331 453 -3 2 1280 379 171 0 20 chrX 91138973 91139055 -75511241 + B1_Mur4 SINE Alu 1 76 -73 2 1280 313 245 135 45 chrX 91139055 91139074 -75511222 + ID_B1 SINE B4 107 190 -34 2 1280 1135 164 23 27 chrX 91139112 91139331 -75510965 - URR1B DNA MER1_type -7 218 1 2 1280 241 169 14 40 chrX 91139493 91139567 -75510729 + L1MB2 LINE L1 5284 5355 -825 2 1280 400 250 58 39 chrX 91139614 91139709 -75510587 + PB1D9 SINE Alu 4 101 -19 2 1280 331 39 58 0 chrX 91139709 91139761 -75510535 + (CATA)n Simple_repeat Simple_repeat 2 56 0 2 1280 1623 168 12 45 chrX 91139762 91139994 -75510302 - MTC LTR MaLR 0 421 200 2 1280 2248 83 64 0 chrX 91139994 91140308 -75509988 - L1_Mus1 LINE L1 0 6567 6234 2 1280 1623 168 12 45 chrX 91140308 91140406 -75509890 - MTC LTR MaLR -222 199 102 2 1280 3694 45 0 0 chrX 91140406 91140847 -75509449 + L1Md_F3 LINE L1 5146 5586 -297 2 1280 8671 25 2 1 chrX 91140848 91141844 -75508452 + L1Md_F3 LINE L1 5588 6584 0 2 1280 1339 65 58 32 chrX 91141865 91142055 -75508241 + B2_Mm2 SINE B2 1 195 0 2 1280 415 120 430 0 chrX 91142082 91142182 -75508114 + B1_Mus2 SINE Alu 5 147 0 2 1280 713 114 9 0 chrX 91142184 91142298 -75507998 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 2 1280 597 144 39 0 chrX 91142312 91142416 -75507880 - MTC LTR MaLR -304 117 10 2 1280 369 0 0 0 chrX 91142561 91142602 -75507694 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1280 697 257 52 128 chrX 91143332 91143450 -75506846 + L1MB2 LINE L1 5796 5926 -245 2 1280 2375 158 3 5 chrX 91143450 91143831 -75506465 - RLTR14 LTR ERV1 0 382 3 2 1280 697 257 52 128 chrX 91143831 91144078 -75506218 + L1MB2 LINE L1 5927 6132 -39 2 1280 232 233 53 53 chrX 91144126 91144208 -75506088 - LTR33 LTR ERVL 0 515 434 2 1280 276 247 39 13 chrX 91144208 91144278 -75506018 + B1F SINE Alu 1 72 -77 2 1280 795 262 72 18 chrX 91144278 91144541 -75505755 + B4A SINE B4 1 283 -9 2 1280 240 35 0 0 chrX 91144546 91144575 -75505721 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1280 2380 185 78 27 chrX 91145207 91145863 -75504433 - Charlie21a DNA MER1_type -9 1204 516 2 1280 1170 281 65 0 chrX 91146182 91146538 -75503758 - MTEa LTR MaLR 0 379 1 2 1280 970 151 5 16 chrX 91147057 91147245 -75503051 - B2_Mm2 SINE B2 -4 191 6 2 1280 387 279 0 0 chrX 91147258 91147344 -75502952 + MER5A DNA MER1_type 62 147 -42 2 1280 328 135 27 0 chrX 91147498 91147572 -75502724 + (TG)n Simple_repeat Simple_repeat 1 76 0 2 1280 249 185 214 36 chrX 91147576 91147660 -75502636 - PB1D10 SINE Alu -18 99 1 2 1280 269 26 26 0 chrX 91147753 91147791 -75502505 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1280 405 0 0 0 chrX 91148141 91148186 -75502110 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 2 1280 236 254 94 16 chrX 91148186 91148250 -75502046 - ID2 SINE ID -9 74 6 2 1280 342 0 0 0 chrX 91149226 91149264 -75501032 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1280 528 191 109 16 chrX 91149282 91149410 -75500886 - B1F SINE Alu -1 148 9 2 1280 900 201 132 0 chrX 91149452 91149641 -75500655 - B3 SINE B2 0 216 3 2 1280 1323 77 16 11 chrX 91149822 91150006 -75500290 - B2_Mm2 SINE B2 -9 186 2 2 1280 1411 230 45 24 chrX 91150396 91150726 -75499570 + Lx7 LINE L1 7017 7353 -343 2 1280 279 0 0 0 chrX 91150727 91150758 -75499538 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1280 6400 64 0 6 chrX 91151321 91152134 -75498162 + L1_Mus2 LINE L1 5759 6566 0 3 1280 1394 63 6 0 chrX 91152144 91152318 -75497978 + B2_Mm1a SINE B2 1 175 -18 3 1280 218 246 0 32 chrX 91152342 91152405 -75497891 + A-rich Low_complexity Low_complexity 2 62 0 3 1280 300 282 0 52 chrX 91152473 91152589 -75497707 - RMER4B LTR ERVK -445 140 31 3 1280 412 165 76 34 chrX 91152799 91152918 -75497378 + Lx7 LINE L1 7559 7682 -14 2 1280 1712 253 144 70 chrX 91153076 91153915 -75496381 - Lx9 LINE L1 -2 7642 6742 3 1280 749 314 70 51 chrX 91153943 91154474 -75495822 + MER52-int LTR ERV1 3785 4325 -2766 3 1280 477 162 35 7 chrX 91154516 91154574 -75495722 + polypyrimidine Low_complexity Low_complexity 90 147 0 3 1280 537 30 0 0 chrX 91154574 91154641 -75495655 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 1280 477 162 35 7 chrX 91154641 91154725 -75495571 + CT-rich Low_complexity Low_complexity 2 89 0 3 1280 237 322 0 0 chrX 91154731 91154790 -75495506 + C-rich Low_complexity Low_complexity 3 61 0 3 1280 445 201 34 11 chrX 91154791 91154880 -75495416 + polypyrimidine Low_complexity Low_complexity 91 180 0 3 1280 1797 186 118 11 chrX 91154880 91155260 -75495036 - MTC LTR MaLR 0 421 1 3 1280 445 201 34 11 chrX 91155260 91155346 -75494950 + polypyrimidine Low_complexity Low_complexity 2 90 0 3 1280 225 235 20 0 chrX 91155346 91155397 -75494899 + CT-rich Low_complexity Low_complexity 5 56 0 3 1280 222 229 268 14 chrX 91155813 91155884 -75494412 + RSINE1 SINE B4 73 161 -4 3 1280 353 62 0 0 chrX 91156015 91156063 -75494233 - HAL1-3A_ME LINE L1 -835 2023 1976 3 1280 210 129 0 0 chrX 91156076 91156107 -75494189 + (TCTCTG)n Simple_repeat Simple_repeat 2 32 0 3 1280 439 123 72 24 chrX 91156114 91156281 -75494015 + (TCTG)n Simple_repeat Simple_repeat 4 178 0 3 1280 244 288 41 0 chrX 91156982 91157055 -75493241 + PB1D7 SINE Alu 11 86 -34 3 1280 180 77 0 0 chrX 91157055 91157081 -75493215 + (GGGTG)n Simple_repeat Simple_repeat 4 29 0 3 1280 233 331 22 80 chrX 91157229 91157367 -75492929 + L4 LINE RTE 1706 1835 -194 3 1280 249 204 113 41 chrX 91159770 91159867 -75490429 + Charlie5 DNA MER1_type 22 125 -2499 3 1280 742 201 0 0 chrX 91159867 91160001 -75490295 + B1_Mus2 SINE Alu 2 135 -12 3 1280 477 0 0 0 chrX 91160003 91160056 -75490240 + (TAAAA)n Simple_repeat Simple_repeat 4 56 0 3 1280 633 295 26 10 chrX 91160132 91160327 -75489969 - B3A SINE B2 0 198 1 3 1280 4477 181 93 43 chrX 91160459 91161408 -75488888 - RMER1B Other Other -2 1064 69 3 1280 224 244 0 0 chrX 91161707 91161752 -75488544 + GA-rich Low_complexity Low_complexity 3 47 0 3 1280 674 252 168 83 chrX 91162418 91162816 -75487480 + L1MB5 LINE L1 5703 6134 -40 3 1280 750 185 14 7 chrX 91163300 91163447 -75486849 + B1_Mur4 SINE Alu 2 149 -1 3 1280 394 281 50 6 chrX 91163675 91163836 -75486460 + L1MB2 LINE L1 5961 6128 -43 3 1280 782 167 14 21 chrX 91163841 91163982 -75486314 + B1_Mur4 SINE Alu 4 143 -7 3 1280 474 326 0 0 chrX 91164856 91165034 -75485262 + (CTG)n Simple_repeat Simple_repeat 3 180 0 3 1280 300 382 0 0 chrX 91165140 91165318 -75484978 + (CTG)n Simple_repeat Simple_repeat 1 178 0 3 1280 667 159 8 16 chrX 91168625 91168753 -75481543 + B1_Mur2 SINE Alu 15 141 -8 3 1280 252 0 0 0 chrX 91168754 91168782 -75481514 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 3 1280 2195 231 40 38 chrX 91169465 91170415 -75479881 + Lx7 LINE L1 5206 6128 -1568 3 1280 1275 230 47 18 chrX 91170409 91170684 -75479612 + Lx7 LINE L1 6644 6926 -770 3 1280 300 243 14 0 chrX 91171151 91171221 -75479075 + MLT1D LTR MaLR 3 73 -432 3 1280 266 81 0 0 chrX 91171226 91171263 -75479033 - MTC LTR MaLR -8 413 377 3 1280 1513 175 10 14 chrX 91171428 91171717 -75478579 - MTC LTR MaLR -30 391 104 3 1280 1548 169 53 62 chrX 91171747 91172088 -75478208 - Lx5 LINE L1 -1 7049 6712 3 1280 581 141 0 11 chrX 91172091 91172184 -75478112 - MTC LTR MaLR -325 96 5 3 1280 1878 170 67 16 chrX 91172244 91172632 -75477664 - MTD LTR MaLR 0 419 12 3 1280 990 290 33 42 chrX 91172633 91172993 -75477303 + MLT1D LTR MaLR 133 489 -16 3 1280 259 253 22 22 chrX 91172999 91173028 -75477268 - MLT1A0 LTR MaLR -2 406 378 3 1280 252 0 0 0 chrX 91173028 91173056 -75477240 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 3 1280 518 235 382 10 chrX 91173056 91173299 -75476997 - MLT1A0 LTR MaLR -31 377 1 3 1280 268 308 83 40 chrX 91173618 91173786 -75476510 + MIRb SINE MIR 21 188 -88 3 1280 1516 184 200 0 chrX 91174152 91174472 -75475824 + ORR1D1 LTR MaLR 1 384 0 3 1280 5761 204 75 16 chrX 91174472 91175765 -75474531 + ORR1D1-int LTR MaLR 1 1370 0 3 1280 1613 171 120 26 chrX 91175765 91176107 -75474189 + ORR1D1 LTR MaLR 1 374 0 3 1280 979 248 103 9 chrX 91176403 91176733 -75473563 + MLT1A0 LTR MaLR 3 363 -2 3 1280 446 254 0 26 chrX 91176763 91176876 -75473420 + PB1D7 SINE Alu 5 114 -6 3 1280 186 43 0 0 chrX 91177359 91177382 -75472914 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 3 1280 2605 148 45 28 chrX 91177652 91178158 -75472138 - RLTR28 LTR ERVL 0 524 10 3 1280 981 97 37 0 chrX 91178271 91178405 -75471891 - B1_Mus1 SINE Alu -9 139 1 3 1280 27 0 0 0 chrX 91178410 91178437 -75471859 + AT_rich Low_complexity Low_complexity 1 27 0 3 1280 282 29 0 0 chrX 91178504 91178539 -75471757 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 3 1280 21 71 0 0 chrX 91178634 91178676 -75471620 + AT_rich Low_complexity Low_complexity 1 42 0 3 1280 346 319 0 17 chrX 91180408 91180523 -75469773 + MER5A DNA MER1_type 2 114 -75 3 1280 960 213 19 28 chrX 91180528 91180741 -75469555 + B3 SINE B2 2 212 -4 3 1280 888 64 0 79 chrX 91181025 91181058 -75469238 - Lx2A1 LINE L1 -1 7007 6982 3 1280 1220 115 32 11 chrX 91181058 91181243 -75469053 - B2_Mm1t SINE B2 -3 190 2 3 1280 888 64 0 79 chrX 91181243 91181361 -75468935 - Lx2A1 LINE L1 -27 6981 6868 3 1280 2903 197 83 47 chrX 91181377 91182148 -75468148 - RMER3D-int LTR ERVK -265 2577 1779 3 1280 860 288 124 0 chrX 91182615 91182914 -75467382 - MER2 DNA MER2_type -9 336 1 3 1280 2191 218 16 66 chrX 91182954 91183531 -75466765 - RMER1B Other Other -560 506 1 3 1280 208 131 21 21 chrX 91183635 91183682 -75466614 + CT-rich Low_complexity Low_complexity 3 49 0 3 1280 1043 64 36 0 chrX 91183686 91183826 -75466470 - B1_Mus2 SINE Alu -2 145 1 3 1280 836 271 92 17 chrX 91183996 91184236 -75466060 - MER68 LTR ERVL 0 563 306 3 1280 305 75 0 0 chrX 91184294 91184334 -75465962 + Lx9 LINE L1 7365 7404 -240 3 1280 450 270 65 39 chrX 91184337 91184489 -75465807 - MER68 LTR ERVL -265 298 143 3 1280 734 213 165 13 chrX 91184489 91184669 -75465627 - ORR1D1 LTR MaLR 0 374 165 3 1280 573 15 0 0 chrX 91184669 91184735 -75465561 + (GA)n Simple_repeat Simple_repeat 1 66 0 3 1280 734 213 165 13 chrX 91184735 91184778 -75465518 - ORR1D1 LTR MaLR -210 164 117 3 1280 499 209 206 56 chrX 91185031 91185269 -75465027 + Lx9 LINE L1 7365 7637 -7 3 1280 352 218 13 13 chrX 91185487 91185566 -75464730 + ID4_ SINE ID 5 83 0 3 1280 1104 248 43 60 chrX 91185829 91186177 -75464119 + ORR1E LTR MaLR 1 342 -17 3 1280 402 256 77 0 chrX 91186221 91186338 -75463958 + MIR SINE MIR 7 132 -130 3 1280 508 262 40 63 chrX 91186358 91186583 -75463713 + L1ME3A LINE L1 5817 6050 -112 3 1280 258 211 26 78 chrX 91186650 91186727 -75463569 + LTR80B LTR ERVL 239 311 -273 3 1280 738 266 94 64 chrX 91186881 91187210 -75463086 - MLT1C LTR MaLR -94 373 35 3 1280 213 280 0 0 chrX 91187223 91187298 -75462998 + T-rich Low_complexity Low_complexity 1 75 0 3 1280 956 138 41 0 chrX 91187300 91187495 -75462801 - Lx3B LINE L1 -1 6972 6770 3 1280 3680 15 0 0 chrX 91187495 91187896 -75462400 + MERVL-int LTR ERVL 3243 3643 -1842 3 1280 5633 109 28 5 chrX 91187896 91188750 -75461546 - Lx3B LINE L1 -206 6767 5894 3 1280 6665 82 13 6 chrX 91188750 91189649 -75460647 + Lx3B LINE L1 4969 5874 -12 3 1280 967 152 214 0 chrX 91189649 91189827 -75460469 - B3 SINE B2 0 216 1 3 1280 359 306 128 11 chrX 91190091 91190279 -75460017 + MLT1H LTR MaLR 321 530 -19 3 1280 234 308 38 25 chrX 91190328 91190408 -75459888 - ID4 SINE ID -1 82 2 3 1280 307 307 58 53 chrX 91190560 91190749 -75459547 - MLT1K LTR MaLR -39 556 367 3 1280 479 322 64 95 chrX 91191017 91191374 -75458922 - ORR1E LTR MaLR 0 359 14 3 1280 1036 245 22 69 chrX 91191573 91191893 -75458403 + RLTR18B LTR ERVK 1 305 -311 3 1280 1516 216 20 23 chrX 91191877 91192265 -75458031 + RLTR18B LTR ERVK 144 507 -5 3 1280 1019 104 141 0 chrX 91192508 91192671 -75457625 + B2_Mm2 SINE B2 2 187 -8 3 1280 2619 62 6 0 chrX 91192948 91193273 -75457023 - ORR1A2 LTR MaLR 0 327 1 3 1280 868 35 0 0 chrX 91193479 91193593 -75456703 + B1_Mus1 SINE Alu 35 148 0 3 1280 366 205 0 0 chrX 91193593 91193671 -75456625 + GA-rich Low_complexity Low_complexity 3 80 0 3 1280 911 215 50 15 chrX 91194400 91194598 -75455698 + B3 SINE B2 1 205 -11 3 1280 872 169 0 0 chrX 91194642 91194784 -75455512 + B1_Mus2 SINE Alu 6 147 0 3 1280 260 319 143 0 chrX 91194870 91194989 -75455307 + B1F SINE Alu 1 136 -13 3 1280 973 254 186 2 chrX 91195294 91195751 -75454545 - L1MB7 LINE L1 -1 6183 5643 3 1280 1945 231 115 65 chrX 91195755 91196481 -75453815 + RMER19B LTR ERVK 2 757 -145 3 1280 274 23 47 0 chrX 91196481 91196524 -75453772 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 3 1280 1945 231 115 65 chrX 91196524 91196547 -75453749 + RMER19B LTR ERVK 758 787 -115 3 1280 3584 77 28 12 chrX 91196573 91197072 -75453224 - L1_Mus4 LINE L1 -7 6629 6123 3 1280 321 125 9 235 chrX 91197138 91197253 -75453043 - RMER19B LTR ERVK -114 788 700 3 1280 1254 28 0 0 chrX 91197281 91197426 -75452870 - B1_Mus1 SINE Alu -2 146 2 3 1280 522 99 0 24 chrX 91197429 91197512 -75452784 - RMER19B LTR ERVK -19 883 803 3 1280 1788 198 76 82 chrX 91197510 91197999 -75452297 - RMER19B LTR ERVK -416 486 1 3 1280 608 273 119 15 chrX 91198027 91198228 -75452068 - L1M3 LINE L1 -554 5626 5405 3 1280 978 171 193 0 chrX 91198243 91198424 -75451872 + B3 SINE B2 1 216 0 3 1280 288 242 83 83 chrX 91198565 91198673 -75451623 + PB1D10 SINE Alu 9 116 -1 3 1280 277 318 78 23 chrX 91198841 91198970 -75451326 + MER21B LTR ERV1 604 739 -124 3 1280 1484 78 16 0 chrX 91199042 91199234 -75451062 + B2_Mm2 SINE B2 1 195 0 4 1280 4586 124 10 60 chrX 91199874 91200679 -75449617 - Lx3A LINE L1 -7 6974 6210 4 1280 973 259 63 26 chrX 91200891 91201087 -75449209 + B4A SINE B4 13 216 -76 4 1280 405 0 0 0 chrX 91201087 91201132 -75449164 + (TAA)n Simple_repeat Simple_repeat 2 46 0 4 1280 973 259 63 26 chrX 91201132 91201205 -75449091 + B4A SINE B4 217 291 -1 4 1280 836 256 98 26 chrX 91201244 91201509 -75448787 + B4A SINE B4 1 284 -8 4 1280 285 299 11 44 chrX 91201575 91201666 -75448630 + B1F SINE Alu 1 88 -61 4 1280 284 341 0 0 chrX 91201673 91201755 -75448541 + GA-rich Low_complexity Low_complexity 3 84 0 4 1280 387 0 0 0 chrX 91201918 91201961 -75448335 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 4 1280 1027 82 6 30 chrX 91201961 91202125 -75448171 - B2_Mm1a SINE B2 -33 160 1 4 1280 675 210 47 23 chrX 91202155 91202326 -75447970 - MER20 DNA MER1_type 0 219 45 4 1280 333 0 0 0 chrX 91202413 91202450 -75447846 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1280 303 28 0 0 chrX 91202450 91202485 -75447811 + (GA)n Simple_repeat Simple_repeat 2 37 0 4 1280 233 350 29 47 chrX 91202948 91203119 -75447177 + MLT1L LTR MaLR 436 603 -7 4 1280 525 350 135 33 chrX 91203247 91203610 -75446686 - MER21B LTR ERV1 -187 676 277 4 1280 294 289 0 13 chrX 91203919 91203996 -75446300 - MER21B LTR ERV1 -776 87 12 4 1280 522 310 93 29 chrX 91204626 91204872 -75445424 - MIR SINE MIR 0 262 1 4 1280 22 94 0 0 chrX 91205289 91205353 -75444943 + AT_rich Low_complexity Low_complexity 1 64 0 4 1280 204 97 0 0 chrX 91205479 91205510 -75444786 + (CTTG)n Simple_repeat Simple_repeat 1 31 0 4 1280 1197 179 106 7 chrX 91205553 91205835 -75444461 + MTD LTR MaLR 104 413 -6 4 1280 416 91 21 64 chrX 91205838 91205979 -75444317 + RMER17A LTR ERVK 318 452 -299 4 1280 752 57 19 0 chrX 91205986 91206092 -75444204 + B1_Mus2 SINE Alu 40 147 0 4 1280 307 224 0 62 chrX 91206095 91206176 -75444120 + L1MEg LINE L1 1882 1957 -4127 4 1280 1394 94 5 15 chrX 91206405 91206600 -75443696 + B2_Mm1t SINE B2 1 193 0 4 1280 214 308 103 0 chrX 91206634 91206712 -75443584 + RSINE1 SINE B4 1 86 -79 4 1280 672 230 156 6 chrX 91206643 91206822 -75443474 + B3 SINE B2 10 215 -1 4 1280 262 329 0 0 chrX 91206842 91206918 -75443378 + MER21B LTR ERV1 12 87 -776 4 1280 274 261 54 0 chrX 91206950 91207042 -75443254 - PB1 SINE Alu -29 98 2 4 1280 222 314 22 34 chrX 91207318 91207407 -75442889 - MER5B DNA MER1_type -3 175 88 4 1280 258 167 0 0 chrX 91207435 91207495 -75442801 + (CAT)n Simple_repeat Simple_repeat 2 61 0 4 1280 228 279 0 0 chrX 91207628 91207689 -75442607 + MER5B DNA MER1_type 117 177 -1 4 1280 642 222 0 36 chrX 91207871 91208011 -75442285 - B1_Mur2 SINE Alu -5 144 10 4 1280 298 273 0 108 chrX 91207915 91208026 -75442270 - MT2B LTR ERVL -344 257 159 4 1280 3941 112 15 8 chrX 91208190 91208783 -75441513 + Lx2A1 LINE L1 6409 7005 -3 4 1280 409 267 11 0 chrX 91208824 91208914 -75441382 + 5S rRNA rRNA 1 91 -30 4 1280 405 287 17 17 chrX 91209372 91209489 -75440807 + PB1D10 SINE Alu 1 117 0 4 1280 255 224 90 0 chrX 91209503 91209570 -75440726 + B3A SINE B2 1 73 -125 4 1280 318 259 0 0 chrX 91209555 91209613 -75440683 - B3A SINE B2 -41 157 100 4 1280 22 0 0 0 chrX 91209663 91209685 -75440611 + AT_rich Low_complexity Low_complexity 1 22 0 4 1280 338 293 132 76 chrX 91210154 91210630 -75439666 - L1MEc LINE L1 -5580 820 318 4 1280 1560 53 0 0 chrX 91210644 91210832 -75439464 - B2_Mm1t SINE B2 -4 189 2 4 1280 235 304 127 40 chrX 91210863 91211116 -75439180 + L1M2 LINE L1 4999 5273 -870 4 1280 512 217 8 17 chrX 91211119 91211236 -75439060 + B1_Mur3 SINE Alu 1 116 -33 4 1280 944 103 0 14 chrX 91211334 91211482 -75438814 + (GAAA)n Simple_repeat Simple_repeat 2 147 0 4 1280 662 291 57 53 chrX 91211495 91211742 -75438554 + B4A SINE B4 2 249 -43 4 1280 234 291 0 0 chrX 91211741 91211796 -75438500 - RSINE1 SINE B4 -107 58 4 4 1280 282 310 74 66 chrX 91211811 91211932 -75438364 - ID_B1 SINE B4 -8 216 95 4 1280 2626 67 6 19 chrX 91212765 91213129 -75437167 + L1_Mus3 LINE L1 6278 6636 -2 4 1280 189 345 16 25 chrX 91213347 91213469 -75436827 + MER5A DNA MER1_type 59 179 -10 4 1280 225 65 0 0 chrX 91214445 91214476 -75435820 + (GGA)n Simple_repeat Simple_repeat 3 33 0 4 1280 321 180 0 0 chrX 91214525 91214614 -75435682 + GA-rich Low_complexity Low_complexity 2 90 0 4 1280 227 175 0 0 chrX 91214736 91214776 -75435520 + GA-rich Low_complexity Low_complexity 3 42 0 4 1280 300 91 0 0 chrX 91215780 91215824 -75434472 + (TGAA)n Simple_repeat Simple_repeat 2 45 0 4 1280 377 264 119 43 chrX 91215853 91216106 -75434190 - B4 SINE B4 -18 274 3 4 1280 233 303 111 0 chrX 91216119 91216218 -75434078 - PB1D10 SINE Alu -6 111 2 4 1280 406 198 246 8 chrX 91216255 91216377 -75433919 + RSINE1 SINE B4 4 154 -11 4 1280 298 137 0 19 chrX 91216450 91216502 -75433794 - 5S rRNA rRNA -32 89 39 4 1280 319 317 40 33 chrX 91216526 91216676 -75433620 + MER5B DNA MER1_type 4 154 -24 4 1280 288 67 33 16 chrX 91217925 91217986 -75432310 + (TTTTTG)n Simple_repeat Simple_repeat 5 66 0 4 1280 1221 48 7 0 chrX 91217986 91218131 -75432165 - B1_Mm SINE Alu 0 147 2 4 1280 198 91 0 0 chrX 91218533 91218566 -75431730 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 4 1280 729 233 68 0 chrX 91218570 91218716 -75431580 - B3A SINE B2 -42 156 1 4 1280 309 26 0 0 chrX 91219084 91219122 -75431174 + (TTG)n Simple_repeat Simple_repeat 2 39 0 4 1280 1166 50 0 0 chrX 91219122 91219262 -75431034 - B1_Mus1 SINE Alu -7 141 2 4 1280 265 254 0 0 chrX 91220052 91220115 -75430181 - L2 LINE L2 -854 2565 2503 4 1280 494 296 62 84 chrX 91220225 91220498 -75429798 + MLT2F LTR ERVL 70 336 -327 4 1280 226 310 83 23 chrX 91220869 91221001 -75429295 - L2 LINE L2 -948 2471 2332 4 1280 208 274 20 0 chrX 91221042 91221093 -75429203 - L2 LINE L2 -1086 2333 2282 4 1280 1974 43 0 0 chrX 91221137 91221372 -75428924 + L1Md_A LINE L1 6346 6580 -2 4 1280 584 229 8 8 chrX 91221411 91221530 -75428766 + PB1D7 SINE Alu 2 120 0 4 1280 308 270 0 33 chrX 91221577 91221669 -75428627 + PB1D10 SINE Alu 24 112 -5 4 1280 893 241 51 39 chrX 91221711 91221966 -75428330 + Lx8 LINE L1 7144 7401 -72 4 1280 700 264 19 6 chrX 91222361 91222521 -75427775 + MER20 DNA MER1_type 4 165 -54 4 1280 306 0 0 0 chrX 91222614 91222648 -75427648 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1280 594 246 7 106 chrX 91222650 91222791 -75427505 - B3A SINE B2 -71 127 1 4 1280 180 0 0 0 chrX 91223356 91223376 -75426920 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 1280 252 253 0 26 chrX 91223377 91223454 -75426842 + GA-rich Low_complexity Low_complexity 4 78 0 4 1280 922 279 29 4 chrX 91223456 91223733 -75426563 + B4A SINE B4 5 288 -4 4 1280 207 194 0 0 chrX 91223928 91223964 -75426332 + (TGG)n Simple_repeat Simple_repeat 1 36 0 4 1280 555 151 130 19 chrX 91224210 91224305 -75425991 + B1_Mur2 SINE Alu 30 138 -11 4 1280 261 0 0 0 chrX 91224305 91224334 -75425962 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1280 555 151 130 19 chrX 91224334 91224346 -75425950 + B1_Mur2 SINE Alu 139 149 0 4 1280 360 0 0 0 chrX 91224559 91224599 -75425697 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1280 648 246 62 72 chrX 91224604 91224797 -75425499 + B3A SINE B2 2 192 -3 4 1280 692 236 137 0 chrX 91224799 91224981 -75425315 + B3 SINE B2 2 208 -8 4 1280 205 288 0 0 chrX 91225086 91225145 -75425151 + G-rich Low_complexity Low_complexity 1 59 0 4 1280 180 111 0 0 chrX 91225312 91225339 -75424957 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1280 778 171 8 0 chrX 91225356 91225485 -75424811 + B1_Mus2 SINE Alu 9 138 -9 4 1280 389 171 13 20 chrX 91225525 91225628 -75424668 - B1F1 SINE Alu -13 136 39 4 1280 180 0 0 0 chrX 91225753 91225773 -75424523 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 1281 495 292 46 61 chrX 91229358 91229552 -75420744 + B3A SINE B2 1 191 -7 4 1281 500 247 21 0 chrX 91229552 91229649 -75420647 + B3A SINE B2 2 100 -98 4 1281 200 102 0 71 chrX 91229649 91229691 -75420605 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1281 813 134 96 7 chrX 91229695 91229830 -75420466 - B1_Mus2 SINE Alu 0 147 1 4 1281 556 222 51 8 chrX 91229830 91229948 -75420348 + B3 SINE B2 88 210 -6 4 1281 790 189 7 7 chrX 91230093 91230242 -75420054 - B1_Mur4 SINE Alu 0 150 2 4 1281 695 249 159 90 chrX 91230692 91231125 -75419171 - L1MB5 LINE L1 -9 6165 5703 4 1281 566 175 21 14 chrX 91231886 91232031 -75418265 - Lx9 LINE L1 0 7644 7499 4 1281 1592 84 9 4 chrX 91232033 91232260 -75418036 - L1_Mus3 LINE L1 -7 6631 6404 4 1281 816 147 14 14 chrX 91232266 91232404 -75417892 - Lx9 LINE L1 -212 7432 7295 4 1281 608 337 6 0 chrX 91232455 91232618 -75417678 - RSINE1 SINE B4 -1 164 1 4 1281 180 234 123 15 chrX 91232771 91232826 -75417470 - MIR SINE MIR -25 237 175 4 1281 536 178 25 0 chrX 91232826 91232944 -75417352 + Lx2B LINE L1 6880 7000 0 4 1281 248 320 56 37 chrX 91234308 91234415 -75415881 - MIRc SINE MIR -158 110 2 4 1281 421 236 0 78 chrX 91234927 91235042 -75415254 + PB1D7 SINE Alu 4 109 -11 4 1281 965 320 64 61 chrX 91235059 91235349 -75414947 - LTR40a LTR ERVL -5 514 227 4 1281 851 208 91 0 chrX 91235349 91235546 -75414750 - B3 SINE B2 0 216 2 4 1281 965 320 64 61 chrX 91235546 91235711 -75414585 - LTR40a LTR ERVL -293 226 59 4 1281 323 89 18 0 chrX 91235756 91235812 -75414484 + (CATA)n Simple_repeat Simple_repeat 2 58 0 5 1281 221 83 28 0 chrX 91235879 91235915 -75414381 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 1281 359 265 0 12 chrX 91235957 91236041 -75414255 + ID4 SINE ID 1 83 0 5 1281 756 281 35 39 chrX 91236068 91236298 -75413998 + B4 SINE B4 5 233 -59 5 1281 636 141 180 8 chrX 91236349 91236471 -75413825 + URR1B DNA MER1_type 83 225 0 5 1281 324 286 114 0 chrX 91236580 91236685 -75413611 + PB1D10 SINE Alu 1 117 0 5 1281 1086 103 0 0 chrX 91236689 91236835 -75413461 + B1_Mus1 SINE Alu 1 146 -2 5 1281 358 292 130 43 chrX 91237065 91237319 -75412977 + B4A SINE B4 3 278 -14 5 1281 208 233 0 32 chrX 91237944 91238006 -75412290 + (CACG)n Simple_repeat Simple_repeat 1 60 0 5 1281 1194 61 0 13 chrX 91238259 91238408 -75411888 - B1_Mm SINE Alu 0 147 1 5 1281 212 286 18 0 chrX 91238525 91238581 -75411715 + MER5A DNA MER1_type 13 69 -120 5 1281 1209 105 23 0 chrX 91238587 91238759 -75411537 + B2_Mm1t SINE B2 2 177 -16 5 1281 365 124 0 22 chrX 91238846 91238912 -75411384 + B2_Mm2 SINE B2 47 109 -107 5 1281 180 0 0 0 chrX 91238927 91238947 -75411349 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 5 1281 246 254 0 63 chrX 91238963 91239026 -75411270 + B3 SINE B2 1 59 -157 5 1281 568 65 0 0 chrX 91239026 91239103 -75411193 - Lx3A LINE L1 -289 6692 6616 5 1281 1673 87 4 84 chrX 91239103 91239378 -75410918 + Lx3B LINE L1 6720 6972 -1 5 1281 652 217 151 0 chrX 91239400 91239552 -75410744 + B3 SINE B2 27 201 -15 5 1281 204 40 0 0 chrX 91239556 91239581 -75410715 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 1281 815 207 144 18 chrX 91239610 91239777 -75410519 + B3 SINE B2 9 196 -20 5 1281 360 0 0 0 chrX 91239779 91239819 -75410477 + (GA)n Simple_repeat Simple_repeat 2 41 0 5 1281 618 276 58 62 chrX 91239838 91240062 -75410234 + ID_B1 SINE B4 2 224 0 5 1281 29 0 0 0 chrX 91240062 91240091 -75410205 + AT_rich Low_complexity Low_complexity 1 29 0 5 1281 464 321 0 0 chrX 91240091 91240203 -75410093 + ID_B1 SINE B4 80 191 -33 5 1281 403 251 98 40 chrX 91240709 91240857 -75409439 - MER3 DNA MER1_type -41 168 15 5 1281 285 29 0 0 chrX 91241138 91241172 -75409124 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 5 1281 382 96 0 0 chrX 91241297 91241349 -75408947 + ORR1D1 LTR MaLR 323 374 0 5 1281 271 273 39 0 chrX 91241453 91241530 -75408766 + ID4 SINE ID 4 83 0 5 1281 3650 112 153 31 chrX 91241585 91241874 -75408422 + RMER6A LTR ERVK 1 321 -435 5 1281 519 17 0 0 chrX 91241874 91241934 -75408362 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 1281 3650 112 153 31 chrX 91241934 91242318 -75407978 + RMER6A LTR ERVK 322 755 -1 5 1281 934 172 0 0 chrX 91242446 91242591 -75407705 + B1_Mur4 SINE Alu 1 145 -5 5 1281 642 171 0 0 chrX 91242592 91242715 -75407581 + GA-rich Low_complexity Low_complexity 4 126 0 5 1281 613 214 67 20 chrX 91243299 91243470 -75406826 - B3 SINE B2 -13 182 12 5 1281 339 44 0 0 chrX 91243470 91243515 -75406781 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 5 1281 421 283 78 26 chrX 91243522 91243638 -75406658 - B1F SINE Alu -27 122 1 5 1281 1204 82 0 0 chrX 91243648 91243807 -75406489 + L1_Mus1 LINE L1 6409 6567 0 5 1281 235 267 60 107 chrX 91243807 91243965 -75406331 + MER96B DNA hAT 266 416 -1 5 1281 357 340 110 43 chrX 91244372 91244581 -75405715 - MER90a LTR ERV1 -95 519 297 5 1281 334 297 42 61 chrX 91245080 91245245 -75405051 - RMER15 LTR ERVL -70 505 344 5 1281 372 264 0 0 chrX 91245954 91246045 -75404251 + L1MB1 LINE L1 5864 5954 -214 5 1281 6150 105 52 11 chrX 91246102 91246178 -75404118 - Lx3C LINE L1 -8 6968 6854 5 1281 198 0 0 0 chrX 91246178 91246200 -75404096 + (CACCC)n Simple_repeat Simple_repeat 3 24 0 5 1281 6150 105 52 11 chrX 91246200 91247068 -75403228 - Lx3C LINE L1 -123 6853 5985 5 1281 333 102 0 0 chrX 91247124 91247183 -75403113 + (A)n Simple_repeat Simple_repeat 1 59 0 5 1281 788 190 44 0 chrX 91247186 91247323 -75402973 + B3 SINE B2 13 155 -61 5 1281 1497 205 20 51 chrX 91247307 91247657 -75402639 - ORR1D1 LTR MaLR -35 339 1 5 1281 279 298 32 86 chrX 91247685 91247827 -75402469 + L1MB2 LINE L1 5943 6083 -88 5 1281 237 65 0 0 chrX 91247827 91247858 -75402438 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 5 1281 1044 53 0 43 chrX 91247858 91247996 -75402300 - B1_Mus2 SINE Alu -13 134 3 5 1281 279 298 32 86 chrX 91247996 91248039 -75402257 + L1MB2 LINE L1 6084 6118 -53 5 1281 499 280 0 60 chrX 91248082 91248215 -75402081 + RSINE1 SINE B4 37 161 -4 5 1281 180 0 0 0 chrX 91248220 91248240 -75402056 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 1281 311 262 111 9 chrX 91248432 91248540 -75401756 + PB1 SINE Alu 7 125 -2 5 1281 243 0 0 0 chrX 91248965 91248992 -75401304 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1281 684 195 117 19 chrX 91249821 91249983 -75400313 + B3 SINE B2 39 216 0 5 1281 1115 67 0 0 chrX 91250416 91250551 -75399745 - B1_Mm SINE Alu -9 138 4 5 1281 473 152 38 12 chrX 91250566 91250646 -75399650 + RMER20B LTR ERVK 521 602 -25 5 1281 1031 183 59 5 chrX 91250893 91251096 -75399200 + B3 SINE B2 1 214 -2 5 1281 554 103 11 0 chrX 91251166 91251253 -75399043 + (GA)n Simple_repeat Simple_repeat 1 88 0 5 1281 243 264 74 19 chrX 91251266 91251374 -75398922 + YREP_Mm Unknown Unknown 181 294 -1518 5 1281 439 191 112 0 chrX 91251307 91251396 -75398900 - B1F2 SINE Alu -50 99 1 5 1281 291 250 153 12 chrX 91251324 91251409 -75398887 - B4A SINE B4 -125 167 71 5 1281 189 0 0 0 chrX 91251472 91251493 -75398803 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1281 277 309 0 0 chrX 91251771 91251839 -75398457 + ID4_ SINE ID 16 83 0 5 1281 545 245 12 61 chrX 91251843 91251944 -75398352 + L1M4 LINE L1 5603 5696 -488 5 1281 1386 71 33 0 chrX 91251944 91252127 -75398169 + B2_Mm2 SINE B2 2 190 -5 5 1281 545 245 12 61 chrX 91252127 91252190 -75398106 + L1M4 LINE L1 5697 5759 -425 5 1281 633 188 25 89 chrX 91252255 91252413 -75397883 + B1_Mur4 SINE Alu 2 149 -1 5 1281 1809 210 99 28 chrX 91252493 91252958 -75397338 - RMER1B Other Other -562 504 45 5 1281 482 266 0 0 chrX 91253022 91253131 -75397165 + PB1D9 SINE Alu 12 120 0 5 1281 640 194 7 52 chrX 91253162 91253298 -75396998 - B3 SINE B2 -86 130 1 5 1281 948 275 36 64 chrX 91253423 91253780 -75396516 + L1MA10 LINE L1 5981 6327 -7 5 1281 748 244 42 51 chrX 91253798 91254014 -75396282 + B3 SINE B2 3 216 0 5 1281 629 186 172 0 chrX 91254014 91254159 -75396137 - RMER19B LTR ERVK 0 902 733 5 1281 667 93 7 18 chrX 91254139 91254238 -75396058 + RMER19B LTR ERVK 803 886 -16 5 1281 1441 62 39 0 chrX 91254238 91254417 -75395879 + B2_Mm2 SINE B2 2 187 -8 5 1281 418 216 48 119 chrX 91254417 91254443 -75395853 + RMER19B LTR ERVK 587 611 0 5 1281 1998 159 62 6 chrX 91254458 91254811 -75395485 - RMER19B LTR ERVK -114 788 416 5 1281 1547 93 8 82 chrX 91254806 91255051 -75395245 - ORR1A2 LTR MaLR -100 227 1 5 1281 1288 181 125 7 chrX 91255051 91255351 -75394945 - RMER19B LTR ERVK -504 398 1 5 1281 434 246 62 18 chrX 91255372 91255484 -75394812 - B1F2 SINE Alu -5 144 28 5 1281 371 270 35 26 chrX 91255514 91255628 -75394668 + PB1D10 SINE Alu 1 115 -2 5 1281 233 290 14 0 chrX 91255811 91255880 -75394416 - ID4_ SINE ID -13 70 1 5 1281 424 280 116 5 chrX 91255990 91256180 -75394116 - MLT1C LTR MaLR -129 338 128 5 1281 366 42 0 0 chrX 91256237 91256285 -75394011 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 5 1281 1121 66 0 0 chrX 91256285 91256421 -75393875 - B1_Mus1 SINE Alu -11 137 2 5 1281 190 296 31 165 chrX 91256516 91256613 -75393683 + L2a LINE L2 3340 3423 -3 5 1281 221 290 60 86 chrX 91256765 91256882 -75393414 + ID_B1 SINE B4 45 158 -66 5 1281 323 274 77 0 chrX 91256806 91256906 -75393390 + PB1D7 SINE Alu 9 122 -5 5 1281 236 287 35 156 chrX 91257545 91257859 -75392437 - RMER17A LTR ERVK -333 418 143 5 1281 235 221 11 11 chrX 91259105 91259192 -75391104 + C-rich Low_complexity Low_complexity 3 89 0 5 1281 206 346 97 33 chrX 91259797 91260096 -75390200 + L2a LINE L2 2754 3071 -348 5 1281 242 304 50 34 chrX 91260113 91260232 -75390064 + L2a LINE L2 3274 3394 -32 5 1281 1237 197 83 91 chrX 91260266 91260651 -75389645 + ORR1C2 LTR MaLR 1 382 -2 5 1281 471 63 0 0 chrX 91260972 91261035 -75389261 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 1281 608 250 35 21 chrX 91261307 91261450 -75388846 + B1F2 SINE Alu 3 147 -2 5 1281 1274 173 5 24 chrX 91261857 91262070 -75388226 + B3 SINE B2 1 209 -7 5 1281 261 192 35 17 chrX 91262165 91262236 -75388060 + L1MB3 LINE L1 5901 5969 -214 5 1281 328 270 0 0 chrX 91262247 91262310 -75387986 + RSINE1 SINE B4 11 73 -92 5 1281 1795 101 28 103 chrX 91262313 91262632 -75387664 + RLTR41 LTR ERV1 1 295 -151 5 1281 2212 38 11 0 chrX 91262632 91262898 -75387398 - L1_Mus2 LINE L1 -428 6138 5870 5 1281 3157 66 5 14 chrX 91262898 91263315 -75386981 + L1_Mus2 LINE L1 6153 6565 -1 5 1281 857 126 28 126 chrX 91263359 91263541 -75386755 + RLTR41 LTR ERV1 283 446 0 5 1281 396 342 0 49 chrX 91263541 91263637 -75386659 + RSINE1 SINE B4 74 163 -2 5 1281 2860 91 55 0 chrX 91263697 91264095 -75386201 - Lx3_Mus LINE L1 0 7009 6590 5 1281 280 264 56 100 chrX 91264113 91264273 -75386023 - RLTR41 LTR ERV1 -43 403 251 5 1281 858 86 23 38 chrX 91264703 91264836 -75385460 - Lx3_Mus LINE L1 -399 6610 6480 5 1281 669 104 0 0 chrX 91264822 91264918 -75385378 + L1_Mur1 LINE L1 5099 5194 -692 5 1281 431 198 60 8 chrX 91264966 91265083 -75385213 + L1MB3 LINE L1 5999 6121 -62 5 1281 222 192 0 0 chrX 91265195 91265247 -75385049 + (TTGTG)n Simple_repeat Simple_repeat 4 55 0 5 1281 353 291 27 0 chrX 91265248 91265358 -75384938 - PB1D10 SINE Alu -3 114 2 6 1281 335 307 23 0 chrX 91265817 91265905 -75384391 + polypurine Low_complexity Low_complexity 3 92 0 6 1281 350 186 171 0 chrX 91265920 91265990 -75384306 + ID4_ SINE ID 1 82 -1 6 1281 401 0 0 20 chrX 91266051 91266101 -75384195 + (CACAC)n Simple_repeat Simple_repeat 1 49 0 6 1281 558 261 61 28 chrX 91268711 91268732 -75381564 + B4 SINE B4 63 81 -211 6 1281 300 27 0 0 chrX 91268732 91268769 -75381527 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 6 1281 1255 106 0 31 chrX 91268772 91268966 -75381330 + B2_Mm2 SINE B2 2 189 -6 6 1281 558 261 61 28 chrX 91268966 91269121 -75381175 + B4 SINE B4 82 245 -47 6 1281 345 79 313 17 chrX 91269421 91269536 -75380760 - B2_Mm2 SINE B2 0 195 47 6 1281 1294 87 35 0 chrX 91269575 91269748 -75380548 - B2_Mm1t SINE B2 -14 179 1 6 1281 21 0 0 0 chrX 91270004 91270025 -75380271 + AT_rich Low_complexity Low_complexity 1 21 0 6 1281 295 289 156 0 chrX 91270037 91270165 -75380131 + B1F SINE Alu 1 148 -1 6 1281 520 207 207 0 chrX 91270393 91270452 -75379844 - B1_Mus1 SINE Alu -1 147 89 6 1281 572 0 15 0 chrX 91270452 91270520 -75379776 + (GA)n Simple_repeat Simple_repeat 1 69 0 6 1281 520 207 207 0 chrX 91270520 91270571 -75379725 - B1_Mus1 SINE Alu -60 88 15 6 1281 598 236 43 31 chrX 91270709 91270871 -75379425 - RSINE1 SINE B4 0 165 2 6 1281 333 118 0 0 chrX 91271143 91271194 -75379102 + (TTTTC)n Simple_repeat Simple_repeat 4 54 0 6 1281 227 188 174 0 chrX 91271195 91271264 -75379032 - PB1D10 SINE Alu -1 116 36 6 1281 306 0 0 0 chrX 91271882 91271916 -75378380 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1281 363 337 20 66 chrX 91272216 91272521 -75377775 - B4A SINE B4 0 292 2 6 1281 272 99 56 0 chrX 91272670 91272741 -75377555 + T-rich Low_complexity Low_complexity 3 77 0 6 1281 302 308 28 138 chrX 91272834 91273015 -75377281 - MLT2C1 LTR ERVL -66 331 171 6 1281 1196 57 82 43 chrX 91273162 91273346 -75376950 + B2_Mm2 SINE B2 5 195 0 6 1281 248 273 0 57 chrX 91273417 91273487 -75376809 - ID4 SINE ID -10 73 8 6 1281 267 312 110 40 chrX 91273566 91273666 -75376630 - L2 LINE L2 -543 2876 2770 6 1281 1005 97 0 18 chrX 91273669 91273837 -75376459 + L1_Mus3 LINE L1 6474 6638 0 6 1281 319 258 75 0 chrX 91273874 91273967 -75376329 + ETnERV2-int LTR ERVK 7070 7169 -237 6 1281 21 0 0 0 chrX 91274535 91274556 -75375740 + AT_rich Low_complexity Low_complexity 1 21 0 6 1281 501 222 201 29 chrX 91275113 91275252 -75375044 + RSINE1 SINE B4 2 164 -1 6 1281 237 352 0 11 chrX 91275528 91275620 -75374676 - L2 LINE L2 -1615 1804 1714 6 1281 275 296 85 12 chrX 91276055 91276137 -75374159 - ORR1D2 LTR MaLR -35 335 248 6 1281 269 105 0 0 chrX 91276137 91276175 -75374121 - ORR1D2 LTR MaLR -4 366 329 6 1281 364 91 319 18 chrX 91276175 91276288 -75374008 - B2_Mm2 SINE B2 -2 193 47 6 1281 1195 90 78 0 chrX 91276320 91276486 -75373810 - B2_Mm1a SINE B2 -14 179 1 6 1281 895 236 56 170 chrX 91276486 91276653 -75373643 - ORR1D2 LTR MaLR -31 339 184 6 1281 1413 70 38 0 chrX 91276653 91276839 -75373457 + B2_Mm2 SINE B2 2 194 -1 6 1281 895 236 56 170 chrX 91276839 91277048 -75373248 - ORR1D2 LTR MaLR -187 183 6 6 1281 2422 144 12 34 chrX 91277110 91277519 -75372777 - MTB_Mm LTR MaLR 0 407 8 6 1281 453 263 60 95 chrX 91277498 91277666 -75372630 + B4 SINE B4 58 219 -73 6 1281 849 152 15 0 chrX 91277538 91277670 -75372626 + B1_Mm SINE Alu 13 146 -1 6 1281 374 221 267 0 chrX 91277854 91277940 -75372356 + PB1D10 SINE Alu 2 110 -7 6 1281 392 235 90 20 chrX 91277958 91278058 -75372238 + RSINE1 SINE B4 21 127 -38 6 1281 396 0 0 0 chrX 91278066 91278110 -75372186 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 1281 216 0 0 0 chrX 91278110 91278133 -75372163 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 1281 613 230 139 20 chrX 91278135 91278286 -75372010 - Lx6 LINE L1 -278 7182 7014 6 1281 351 150 0 0 chrX 91278289 91278349 -75371947 + MLT1A1 LTR MaLR 349 408 0 6 1281 238 273 0 0 chrX 91278349 91278403 -75371893 + MER5A DNA MER1_type 92 145 -44 6 1281 414 272 0 0 chrX 91278684 91278776 -75371520 - RSINE1 SINE B4 -29 136 45 6 1281 320 224 211 29 chrX 91279033 91279198 -75371098 - B3 SINE B2 -2 196 2 6 1281 249 33 0 0 chrX 91279235 91279265 -75371031 + (TTG)n Simple_repeat Simple_repeat 3 32 0 6 1281 799 191 0 0 chrX 91279273 91279409 -75370887 + B1_Mur2 SINE Alu 1 136 -13 6 1281 376 330 0 10 chrX 91279421 91279519 -75370777 - PB1D10 SINE Alu -14 103 7 6 1281 2137 134 29 63 chrX 91279619 91279829 -75370467 - MTC LTR MaLR -20 401 212 6 1281 1454 74 21 0 chrX 91279829 91280019 -75370277 - B2_Mm2 SINE B2 -1 194 1 6 1281 2137 134 29 63 chrX 91280019 91280223 -75370073 - MTC LTR MaLR -210 211 1 6 1281 594 235 33 83 chrX 91280223 91280307 -75369989 - ID_B1 SINE B4 -61 163 86 6 1281 867 167 369 43 chrX 91280307 91280459 -75369837 + ORR1D1 LTR MaLR 1 174 -200 6 1281 522 0 0 0 chrX 91280459 91280517 -75369779 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 1281 867 167 369 43 chrX 91280517 91280646 -75369650 + ORR1D1 LTR MaLR 175 374 0 6 1281 594 235 33 83 chrX 91280646 91280714 -75369582 - ID SINE ID -139 85 20 6 1281 309 278 179 60 chrX 91280875 91281093 -75369203 + MLT1N2 LTR MaLR 32 275 -287 6 1281 284 48 0 23 chrX 91281246 91281289 -75369007 + (TTTTTG)n Simple_repeat Simple_repeat 3 44 0 6 1281 1174 82 0 0 chrX 91281291 91281438 -75368858 - B1_Mus1 SINE Alu 0 148 2 6 1281 198 103 0 0 chrX 91281600 91281629 -75368667 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 6 1281 1135 90 0 0 chrX 91281631 91281776 -75368520 - B1_Mus1 SINE Alu -2 146 2 6 1281 832 199 193 0 chrX 91281796 91281977 -75368319 - B3 SINE B2 0 216 1 6 1281 697 247 16 27 chrX 91281983 91282166 -75368130 - MER20 DNA MER1_type -37 182 2 6 1281 286 231 15 0 chrX 91282321 91282386 -75367910 - B4 SINE B4 -63 229 164 6 1281 378 130 169 0 chrX 91282330 91282407 -75367889 - B1F2 SINE Alu -6 143 54 6 1281 268 315 0 63 chrX 91282434 91282529 -75367767 - MLT1G1 LTR MaLR -301 290 202 6 1281 400 200 0 19 chrX 91282539 91282646 -75367650 + GA-rich Low_complexity Low_complexity 2 106 0 6 1281 449 242 254 0 chrX 91282651 91282816 -75367480 - MLT1G1 LTR MaLR -369 210 4 6 1281 530 257 205 14 chrX 91282820 91283108 -75367188 + L1ME3A LINE L1 5392 5734 -428 6 1281 943 268 210 13 chrX 91283138 91283529 -75366767 + Lx8 LINE L1 6991 7458 -15 6 1281 1005 142 0 0 chrX 91283570 91283718 -75366578 - B1_Mur4 SINE Alu -1 149 2 6 1281 742 173 249 0 chrX 91283762 91283935 -75366361 + B3 SINE B2 1 216 0 6 1281 766 208 0 57 chrX 91283965 91284123 -75366173 + B1_Mur2 SINE Alu 1 149 0 6 1281 431 263 82 63 chrX 91284253 91284460 -75365836 + L1ME3A LINE L1 5860 6070 -103 6 1281 306 0 0 0 chrX 91284467 91284501 -75365795 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1281 414 207 24 12 chrX 91284515 91284598 -75365698 + B3A SINE B2 2 85 -113 6 1281 1197 65 94 12 chrX 91284640 91284811 -75365485 + B2_Mm2 SINE B2 2 186 -9 6 1281 273 29 0 0 chrX 91284816 91284850 -75365446 + (GAAA)n Simple_repeat Simple_repeat 1 34 0 6 1281 652 144 49 188 chrX 91284855 91285078 -75365218 + B2_Mm2 SINE B2 1 192 -3 6 1281 1190 36 0 0 chrX 91285233 91285371 -75364925 + B1_Mus2 SINE Alu 1 138 -9 6 1281 222 37 0 0 chrX 91285371 91285398 -75364898 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 6 1281 1314 77 41 0 chrX 91285459 91285629 -75364667 + B2_Mm2 SINE B2 5 181 -14 6 1281 342 129 160 14 chrX 91285676 91285782 -75364514 + B2_Mm2 SINE B2 47 188 -5 6 1281 986 160 27 37 chrX 91285808 91285996 -75364300 + B2_Mm2 SINE B2 1 186 -9 6 1281 729 231 0 0 chrX 91286022 91286165 -75364131 + B1_Mus1 SINE Alu 6 148 0 6 1281 1045 65 0 0 chrX 91286180 91286319 -75363977 + B1_Mm SINE Alu 9 147 0 6 1281 825 124 0 0 chrX 91286320 91286449 -75363847 + (GA)n Simple_repeat Simple_repeat 2 130 0 6 1281 364 252 19 89 chrX 91286466 91286482 -75363814 + ID_B1 SINE B4 78 223 -1 6 1281 677 187 14 14 chrX 91286482 91286623 -75363673 + B1_Mus2 SINE Alu 7 147 0 6 1281 21 0 0 0 chrX 91286629 91286650 -75363646 + AT_rich Low_complexity Low_complexity 1 21 0 6 1281 1591 116 220 112 chrX 91286728 91287156 -75363140 + RMER19B LTR ERVK 1 474 -428 6 1281 1822 50 0 149 chrX 91287168 91287274 -75363022 - L1_Mur2 LINE L1 -33 5844 5739 6 1281 1377 66 50 0 chrX 91287274 91287455 -75362841 - B2_Mm1t SINE B2 -2 191 2 6 1281 1822 50 0 149 chrX 91287455 91287542 -75362754 - L1_Mur2 LINE L1 -139 5738 5685 6 1281 1184 62 7 0 chrX 91287542 91287688 -75362608 - B1_Mus1 SINE Alu 0 148 2 6 1281 1822 50 0 149 chrX 91287688 91287795 -75362501 - L1_Mur2 LINE L1 -193 5684 5588 6 1281 3646 118 9 4 chrX 91287799 91288336 -75361960 + Lx4A LINE L1 6519 7058 0 6 1281 1171 238 100 20 chrX 91288374 91288576 -75361720 - RMER6B LTR ERVK -16 445 244 6 1281 2608 59 19 0 chrX 91288576 91288897 -75361399 - ORR1A2 LTR MaLR 0 327 1 6 1281 1171 238 100 20 chrX 91288897 91288956 -75361340 - RMER6B LTR ERVK -218 243 178 6 1281 1191 75 0 0 chrX 91288956 91289103 -75361193 - B1_Mus2 SINE Alu 0 147 1 6 1281 1171 238 100 20 chrX 91289103 91289191 -75361105 - RMER6B LTR ERVK -284 177 68 6 1281 542 168 51 34 chrX 91289193 91289266 -75361030 - RMER6B LTR ERVK -329 132 54 6 1281 342 0 0 0 chrX 91289266 91289304 -75360992 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 1281 542 168 51 34 chrX 91289304 91289347 -75360949 - RMER6B LTR ERVK -408 53 14 6 1281 2332 129 32 0 chrX 91289716 91290118 -75360178 - RMER19B LTR ERVK -12 890 476 6 1281 860 62 0 52 chrX 91290114 91290250 -75360046 + B1_Mus2 SINE Alu 19 147 0 6 1281 3138 111 89 28 chrX 91290274 91290372 -75359924 + Lx4A LINE L1 5691 5797 -1261 6 1281 1500 53 27 0 chrX 91290372 91290559 -75359737 + B2_Mm1t SINE B2 2 193 0 6 1281 3138 111 89 28 chrX 91290559 91290988 -75359308 + Lx4A LINE L1 5798 6250 -808 6 1281 615 62 0 0 chrX 91291008 91291088 -75359208 + (TTTC)n Simple_repeat Simple_repeat 3 82 0 6 1281 1128 75 6 0 chrX 91291088 91291247 -75359049 - B2_Mm1a SINE B2 -33 160 1 6 1281 670 69 0 0 chrX 91291248 91291335 -75358961 + Lx4A LINE L1 6335 6421 -637 6 1281 873 210 0 83 chrX 91291363 91291555 -75358741 - B3 SINE B2 -40 176 1 7 1281 431 200 24 0 chrX 91291729 91291814 -75358482 - B1_Mur3 SINE Alu -10 139 53 7 1281 535 306 79 21 chrX 91291848 91292038 -75358258 - LTR33A LTR ERVL -54 466 266 7 1281 444 233 0 48 chrX 91292081 91292207 -75358089 + MER2 DNA MER2_type 122 241 -104 7 1281 410 276 20 0 chrX 91292203 91292301 -75357995 + ID_B1 SINE B4 12 111 -113 7 1281 287 215 44 151 chrX 91292241 91292400 -75357896 + B2_Mm2 SINE B2 50 191 -4 7 1281 507 226 26 120 chrX 91292387 91292497 -75357799 + ORR1D2 LTR MaLR 74 145 -239 7 1281 903 168 0 0 chrX 91292497 91292640 -75357656 + B1_Mur3 SINE Alu 1 143 -6 7 1281 507 272 91 201 chrX 91292640 91292719 -75357577 + ORR1D2 LTR MaLR 144 205 -165 7 1281 189 0 0 0 chrX 91292719 91292740 -75357556 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 7 1281 1086 77 7 7 chrX 91292740 91292884 -75357412 - B1_Mus1 SINE Alu -3 145 2 7 1281 507 272 91 201 chrX 91292884 91293024 -75357272 + ORR1D2 LTR MaLR 206 356 -14 7 1281 345 254 14 0 chrX 91293033 91293104 -75357192 + MER2 DNA MER2_type 269 340 -5 7 1281 388 251 12 1 chrX 91293286 91293392 -75356904 + L1M5 LINE L1 5623 5729 -435 7 1281 240 35 0 0 chrX 91293763 91293792 -75356504 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 7 1281 198 0 0 0 chrX 91294297 91294319 -75355977 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 1281 299 299 156 11 chrX 91294717 91294896 -75355400 + L1M5 LINE L1 5416 5620 -504 7 1281 1342 95 5 5 chrX 91295478 91295668 -75354628 - B2_Mm2 SINE B2 -4 191 2 7 1281 597 218 60 8 chrX 91295690 91295824 -75354472 - B1F1 SINE Alu -8 141 1 7 1281 307 317 113 23 chrX 91296122 91296295 -75354001 - MLT1F2 LTR MaLR -125 529 277 7 1281 405 320 158 28 chrX 91296295 91296425 -75353871 - MLT1F2 LTR MaLR -236 324 166 7 1281 279 0 0 0 chrX 91296425 91296456 -75353840 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1281 405 320 158 28 chrX 91296456 91296540 -75353756 - MLT1F2 LTR MaLR -395 165 82 7 1281 3550 70 12 35 chrX 91296860 91297346 -75352950 + MT2C_Mm LTR ERVL 1 475 0 7 1281 235 267 0 0 chrX 91297366 91297426 -75352870 + Charlie9 DNA MER1_type 6 65 -2692 7 1281 318 67 0 0 chrX 91297454 91297499 -75352797 + (TA)n Simple_repeat Simple_repeat 2 46 0 7 1281 1154 82 0 0 chrX 91297572 91297719 -75352577 - B1_Mus1 SINE Alu 0 148 2 7 1281 313 272 34 34 chrX 91297726 91297844 -75352452 - L1MB4 LINE L1 -83 6101 5981 7 1281 464 280 38 0 chrX 91297881 91298013 -75352283 - B1F1 SINE Alu -4 145 9 7 1281 2243 250 63 14 chrX 91298021 91298708 -75351588 - L1MB4 LINE L1 -195 5985 5260 7 1281 1114 86 0 0 chrX 91298731 91298871 -75351425 - B1_Mus1 SINE Alu -8 140 1 7 1281 267 0 22 44 chrX 91298874 91298919 -75351377 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 7 1281 1135 51 0 0 chrX 91298919 91299056 -75351240 - B1_Mm SINE Alu -10 137 1 7 1281 370 113 28 14 chrX 91299063 91299135 -75351161 - Lx7 LINE L1 0 7696 7624 7 1281 325 204 68 0 chrX 91299157 91299245 -75351051 - L1MB4 LINE L1 -857 5289 5196 7 1281 335 224 416 20 chrX 91299245 91299389 -75350907 - ID_B1 SINE B4 -21 203 3 7 1281 281 202 39 29 chrX 91299390 91299492 -75350804 - L1MB4 LINE L1 -948 5198 5096 7 1281 345 24 0 0 chrX 91299704 91299746 -75350550 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1281 237 108 0 0 chrX 91300096 91300133 -75350163 + (TCCC)n Simple_repeat Simple_repeat 3 39 0 7 1281 227 317 0 0 chrX 91300525 91300585 -75349711 + B4 SINE B4 81 140 -152 7 1281 462 305 38 0 chrX 91300535 91300666 -75349630 + B1F2 SINE Alu 6 141 -8 7 1281 1309 176 123 37 chrX 91300916 91301096 -75349200 - MTC LTR MaLR -95 326 114 7 1281 1040 124 15 61 chrX 91301096 91301293 -75349003 + B2_Mm2 SINE B2 2 189 -6 7 1281 1309 176 123 37 chrX 91301293 91301412 -75348884 - MTC LTR MaLR -308 113 1 7 1281 345 47 0 0 chrX 91301448 91301491 -75348805 + (GA)n Simple_repeat Simple_repeat 2 44 0 7 1281 646 216 56 0 chrX 91301569 91301694 -75348602 + B1_Mur2 SINE Alu 2 133 -16 7 1281 350 285 27 60 chrX 91302228 91302411 -75347885 - MER5B DNA MER1_type 0 178 2 7 1281 460 252 0 10 chrX 91302585 91302689 -75347607 + PB1D10 SINE Alu 7 109 -8 7 1281 313 250 0 74 chrX 91302769 91302782 -75347514 + MTC LTR MaLR 2 14 -393 7 1281 224 30 0 29 chrX 91302782 91302816 -75347480 + (TTG)n Simple_repeat Simple_repeat 1 33 0 7 1281 581 206 0 4 chrX 91302816 91302930 -75347366 + MTC LTR MaLR 13 120 -299 7 1281 736 166 183 0 chrX 91302945 91303120 -75347176 - B3 SINE B2 0 216 10 7 1281 1078 158 69 14 chrX 91303129 91303347 -75346949 + MTC LTR MaLR 109 338 -83 7 1281 861 58 0 0 chrX 91303385 91303506 -75346790 - B1_Mus2 SINE Alu 0 147 27 7 1281 381 163 69 11 chrX 91303515 91303602 -75346694 + MTC LTR MaLR 330 421 0 7 1281 306 287 8 34 chrX 91303788 91303907 -75346389 + PB1D10 SINE Alu 1 116 -1 7 1281 475 239 26 0 chrX 91303947 91304064 -75346232 + RSINE1 SINE B4 44 163 -2 7 1281 384 77 0 0 chrX 91304097 91304149 -75346147 + (GA)n Simple_repeat Simple_repeat 1 52 0 7 1281 639 242 20 90 chrX 91305369 91305526 -75344770 + B3A SINE B2 1 154 -44 7 1281 396 0 0 0 chrX 91305526 91305570 -75344726 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1281 270 0 0 0 chrX 91305570 91305599 -75344697 + (TC)n Simple_repeat Simple_repeat 2 31 0 7 1281 639 242 20 90 chrX 91305599 91305640 -75344656 + B3A SINE B2 155 185 -13 7 1281 375 319 12 53 chrX 91305685 91305854 -75344442 + RSINE1 SINE B4 3 164 -1 7 1281 363 244 73 39 chrX 91306039 91306218 -75344078 + HAL1 LINE L1 1610 1794 -713 7 1281 209 155 33 33 chrX 91306431 91306491 -75343805 + A-rich Low_complexity Low_complexity 2 61 0 7 1281 387 259 95 0 chrX 91306798 91306914 -75343382 + MLT1A1 LTR MaLR 1 127 -281 7 1281 293 319 0 11 chrX 91306980 91307075 -75343221 + CT-rich Low_complexity Low_complexity 3 96 0 7 1281 303 223 106 10 chrX 91307108 91307212 -75343084 + MLT1A1 LTR MaLR 252 365 0 7 1281 645 210 29 7 chrX 91307277 91307416 -75342880 + B1_Mur1 SINE Alu 2 143 -6 7 1281 458 189 11 32 chrX 91307464 91307557 -75342739 - B3 SINE B2 -125 91 1 7 1281 392 256 54 31 chrX 91307616 91307745 -75342551 - B3A SINE B2 -60 138 7 7 1281 547 254 0 54 chrX 91307867 91307996 -75342300 + RSINE1 SINE B4 35 156 -9 7 1281 698 62 0 10 chrX 91308013 91308110 -75342186 + (TA)n Simple_repeat Simple_repeat 2 97 0 7 1281 638 259 63 21 chrX 91308655 91308844 -75341452 + B3A SINE B2 1 197 -1 7 1281 814 46 0 0 chrX 91308902 91309010 -75341286 + B1_Mm SINE Alu 40 147 0 7 1281 360 0 0 0 chrX 91309010 91309050 -75341246 + (A)n Simple_repeat Simple_repeat 1 40 0 7 1281 226 246 91 15 chrX 91309072 91309138 -75341158 + ID_B1 SINE B4 130 200 -24 7 1281 1121 204 76 58 chrX 91309204 91309363 -75340933 + RMER13A LTR ERVK 96 248 -612 7 1281 4493 12 2 0 chrX 91309363 91309855 -75340441 - MT2_Mm LTR ERVL 0 493 1 7 1281 1121 239 296 61 chrX 91309855 91310297 -75339999 + RMER13A LTR ERVK 249 804 -104 7 1281 1477 59 0 0 chrX 91310617 91310804 -75339492 + L1_Mus2 LINE L1 6380 6566 0 7 1281 657 252 0 42 chrX 91310860 91311026 -75339270 + RSINE1 SINE B4 2 160 -5 7 1281 549 279 0 29 chrX 91311043 91311183 -75339113 - B1_Mur2 SINE Alu -13 136 1 7 1281 366 293 139 28 chrX 91311785 91311929 -75338367 - B4A SINE B4 -127 165 6 7 1281 1384 69 21 21 chrX 91312256 91312448 -75337848 - B2_Mm1t SINE B2 0 193 2 7 1281 4295 43 14 0 chrX 91312541 91313057 -75337239 + L1Md_F3 LINE L1 5064 5586 -297 7 1281 8293 33 1 27 chrX 91313057 91314082 -75336214 + L1Md_F3 LINE L1 5587 6584 0 7 1281 242 288 167 8 chrX 91314131 91314257 -75336039 + Lx8 LINE L1 7196 7341 -132 7 1281 622 218 59 22 chrX 91314260 91314396 -75335900 + B1_Mur1 SINE Alu 1 141 -8 7 1281 186 103 0 0 chrX 91314419 91314448 -75335848 + (GGA)n Simple_repeat Simple_repeat 1 29 0 7 1281 195 129 0 0 chrX 91314455 91314486 -75335810 + (TAG)n Simple_repeat Simple_repeat 2 32 0 7 1281 442 259 26 8 chrX 91314797 91314914 -75335382 - ID_B1 SINE B4 -2 222 104 7 1281 224 200 79 48 chrX 91314945 91315008 -75335288 - RSINE1 SINE B4 -21 144 80 7 1281 306 312 4 79 chrX 91315117 91315244 -75335052 - RSINE1 SINE B4 -138 154 39 7 1281 1542 43 22 0 chrX 91315244 91315429 -75334867 - B2_Mm1a SINE B2 -4 189 1 7 1281 306 293 1 57 chrX 91315429 91315466 -75334830 - RSINE1 SINE B4 -123 42 5 7 1281 709 197 42 7 chrX 91315728 91315871 -75334425 - B1_Mus1 SINE Alu 0 148 1 7 1281 269 262 40 0 chrX 91315872 91315940 -75334356 + B1F SINE Alu 56 130 -19 7 1281 189 183 0 78 chrX 91316222 91316299 -75333997 + GA-rich Low_complexity Low_complexity 5 75 0 7 1281 363 178 52 72 chrX 91316385 91316482 -75333814 + ID_B1 SINE B4 2 96 -128 7 1281 2409 205 146 89 chrX 91316484 91317291 -75333005 + RMER19B LTR ERVK 1 853 -49 7 1281 363 284 32 0 chrX 91317290 91317385 -75332911 + ID_B1 SINE B4 93 190 -34 7 1281 341 230 69 0 chrX 91317447 91317534 -75332762 - B1F SINE Alu -56 93 1 7 1281 260 267 17 0 chrX 91317642 91317702 -75332594 + B1_Mus2 SINE Alu 21 81 -66 7 1281 313 264 244 16 chrX 91317703 91317826 -75332470 + RSINE1 SINE B4 3 153 -12 7 1281 405 263 38 32 chrX 91318328 91318485 -75331811 - RMER5 LTR ERV1 -336 198 41 7 1281 418 294 126 16 chrX 91318792 91318982 -75331314 - B3 SINE B2 -5 211 1 7 1281 1176 68 0 0 chrX 91319117 91319265 -75331031 + B1_Mus1 SINE Alu 1 148 0 7 1281 198 103 0 0 chrX 91319265 91319294 -75331002 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1281 413 283 26 0 chrX 91319647 91319760 -75330536 + B4A SINE B4 65 180 -112 7 1281 195 139 0 0 chrX 91323220 91323256 -75327040 + (TA)n Simple_repeat Simple_repeat 1 36 0 7 1281 25 0 0 0 chrX 91323837 91323862 -75326434 + AT_rich Low_complexity Low_complexity 1 25 0 7 1281 567 222 13 31 chrX 91328163 91328307 -75321989 + PB1D9 SINE Alu 2 148 -1 7 1281 871 152 13 40 chrX 91328796 91328947 -75321349 + B1_Mur3 SINE Alu 3 149 0 7 1281 345 100 0 0 chrX 91328953 91329003 -75321293 + (GGGA)n Simple_repeat Simple_repeat 4 53 0 7 1281 223 305 105 0 chrX 91329379 91329474 -75320822 - MIRc SINE MIR -77 191 87 7 1281 1146 88 0 0 chrX 91329589 91329736 -75320560 + B1_Mus2 SINE Alu 1 147 0 7 1281 1094 88 0 13 chrX 91330091 91330241 -75320055 + B1_Mus1 SINE Alu 1 148 0 8 1281 243 0 0 0 chrX 91330332 91330359 -75319937 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 8 1281 749 194 14 27 chrX 91330382 91330530 -75319766 + B1_Mur3 SINE Alu 2 147 -2 8 1281 267 116 23 0 chrX 91330530 91330573 -75319723 + B1_Mur2 SINE Alu 99 142 -7 8 1281 1003 100 31 6 chrX 91330601 91330762 -75319534 - B2_Mm2 SINE B2 -27 168 4 8 1281 1173 81 0 0 chrX 91330997 91331145 -75319151 + B1_Mus1 SINE Alu 1 148 0 8 1281 1065 88 0 0 chrX 91331363 91331499 -75318797 + B1_Mus1 SINE Alu 2 137 -11 8 1281 499 258 0 0 chrX 91332271 91332395 -75317901 - B1F SINE Alu 0 149 26 8 1281 428 172 237 0 chrX 91332409 91332502 -75317794 + RSINE1 SINE B4 4 118 -47 8 1281 3119 68 115 2 chrX 91332594 91333004 -75317292 + L1Md_F2 LINE L1 6124 6579 -3 8 1281 703 263 10 35 chrX 91333282 91333479 -75316817 + B3A SINE B2 2 193 -5 8 1281 321 354 37 18 chrX 91333512 91333676 -75316620 + Tigger10 DNA Tigger 688 854 -989 8 1281 290 278 176 45 chrX 91333822 91334089 -75316207 + Tigger10 DNA Tigger 1086 1387 -456 8 1281 1217 65 0 0 chrX 91334194 91334332 -75315964 + B1_Mus2 SINE Alu 1 138 -9 8 1281 216 349 46 19 chrX 91334358 91334466 -75315830 - MIR SINE MIR -133 129 19 8 1281 1269 99 41 0 chrX 91334916 91335088 -75315208 + B2_Mm1t SINE B2 1 179 -14 8 1281 186 43 0 0 chrX 91335091 91335114 -75315182 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 8 1281 1245 41 7 14 chrX 91335114 91335252 -75315044 + B1_Mus1 SINE Alu 1 139 -9 8 1281 546 16 0 0 chrX 91335252 91335315 -75314981 + (GAGAA)n Simple_repeat Simple_repeat 4 66 0 8 1281 417 251 84 39 chrX 91335393 91335412 -75314884 + L1MA8 LINE L1 6030 6048 -243 8 1281 858 91 0 0 chrX 91335412 91335533 -75314763 + (GAAAA)n Simple_repeat Simple_repeat 2 122 0 8 1281 417 251 84 39 chrX 91335533 91335691 -75314605 + L1MA8 LINE L1 6049 6215 -76 8 1281 1524 97 0 5 chrX 91335929 91336125 -75314171 - B2_Mm2 SINE B2 0 195 1 8 1281 29 47 0 0 chrX 91336162 91336205 -75314091 + AT_rich Low_complexity Low_complexity 1 43 0 8 1281 228 324 88 0 chrX 91336626 91336694 -75313602 + RSINE1 SINE B4 3 76 -89 8 1281 2128 108 6 163 chrX 91336724 91337190 -75313106 + RMER6A LTR ERVK 57 449 -307 8 1281 1343 20 0 0 chrX 91337191 91337338 -75312958 + B1_Mus1 SINE Alu 2 148 0 8 1281 180 0 0 0 chrX 91337338 91337358 -75312938 + (A)n Simple_repeat Simple_repeat 1 20 0 8 1281 32 0 0 0 chrX 91337408 91337440 -75312856 + AT_rich Low_complexity Low_complexity 1 32 0 8 1281 1949 148 3 3 chrX 91337454 91337766 -75312530 + RMER6A LTR ERVK 444 755 -1 8 1281 393 173 0 74 chrX 91337767 91337848 -75312448 + RSINE1 SINE B4 89 163 -2 8 1281 949 209 72 10 chrX 91337869 91338062 -75312234 + B3 SINE B2 1 205 -11 8 1281 2432 64 16 0 chrX 91338255 91338569 -75311727 + ORR1A2 LTR MaLR 1 319 -8 8 1281 782 210 141 52 chrX 91339426 91339467 -75310829 + B3 SINE B2 1 41 -175 8 1281 1489 95 16 0 chrX 91339467 91339657 -75310639 - B2_Mm2 SINE B2 -2 193 1 8 1281 782 210 141 52 chrX 91339657 91339806 -75310490 + B3 SINE B2 42 208 -8 8 1281 549 240 50 0 chrX 91339813 91339934 -75310362 + B1_Mus2 SINE Alu 7 133 -14 8 1281 963 148 41 17 chrX 91339980 91340152 -75310144 - B2_Mm2 SINE B2 -19 176 1 8 1281 605 272 102 10 chrX 91340186 91340483 -75309813 - L1MA4 LINE L1 -374 5926 5633 8 1281 1599 52 5 20 chrX 91340657 91340852 -75309444 - B2_Mm1t SINE B2 -1 192 1 8 1281 543 281 18 64 chrX 91341553 91341724 -75308572 - RSINE1 SINE B4 0 165 3 8 1281 612 321 60 35 chrX 91341920 91342204 -75308092 - B4A SINE B4 -1 291 1 8 1281 300 252 118 29 chrX 91342520 91342622 -75307674 - PB1D7 SINE Alu -7 113 3 8 1281 1032 144 7 20 chrX 91343355 91343504 -75306792 - B1_Mur2 SINE Alu 0 149 3 8 1281 1452 154 132 172 chrX 91344215 91344615 -75305681 + ORR1C2 LTR MaLR 1 384 0 8 1281 21 0 0 0 chrX 91344732 91344753 -75305543 + AT_rich Low_complexity Low_complexity 1 21 0 8 1281 1019 92 28 28 chrX 91344753 91344898 -75305398 - B1_Mm SINE Alu 0 147 3 8 1281 216 267 0 71 chrX 91345145 91345258 -75305038 + CT-rich Low_complexity Low_complexity 4 108 0 8 1281 387 170 238 82 chrX 91345907 91346029 -75304267 + PB1D9 SINE Alu 10 150 0 8 1281 201 280 165 8 chrX 91346075 91346208 -75304088 + MIRc SINE MIR 82 235 -33 8 1281 335 273 70 10 chrX 91347051 91347151 -75303145 + PB1D10 SINE Alu 12 117 0 8 1281 615 265 22 29 chrX 91347886 91348022 -75302274 + B1F1 SINE Alu 15 149 0 8 1281 811 206 14 7 chrX 91348032 91348179 -75302117 + B1_Mus1 SINE Alu 1 148 0 8 1281 286 286 159 45 chrX 91348264 91348352 -75301944 + PB1D10 SINE Alu 3 100 -17 8 1281 253 178 0 22 chrX 91348382 91348428 -75301868 - L1ME3 LINE L1 -90 6072 6028 8 1281 589 198 86 0 chrX 91348483 91348599 -75301697 - B1_Mus1 SINE Alu -21 127 2 8 1281 192 40 0 0 chrX 91349064 91349089 -75301207 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 8 1281 303 254 105 1 chrX 91349651 91349758 -75300538 + PB1D7 SINE Alu 3 119 -1 8 1281 237 211 250 0 chrX 91350042 91350094 -75300202 - B4A SINE B4 -11 281 217 8 1281 365 258 315 12 chrX 91350289 91350451 -75299845 - B4A SINE B4 -60 232 22 8 1281 221 0 0 33 chrX 91351147 91351177 -75299119 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 8 1281 1556 49 16 16 chrX 91352119 91352304 -75297992 + B2_Mm2 SINE B2 2 186 -9 8 1281 21 36 0 0 chrX 91352328 91352356 -75297940 + AT_rich Low_complexity Low_complexity 1 28 0 8 1281 1679 31 5 10 chrX 91352473 91352665 -75297631 + B2_Mm1t SINE B2 2 192 -1 8 1281 1148 97 0 0 chrX 91353005 91353150 -75297146 + B1_Mus2 SINE Alu 3 147 0 8 1281 884 44 70 0 chrX 91353301 91353415 -75296881 - B1_Mus1 SINE Alu -8 140 19 8 1281 1176 83 0 0 chrX 91353567 91353712 -75296584 + B1_Mm SINE Alu 1 145 -2 8 1281 316 252 60 43 chrX 91353836 91353952 -75296344 - B1F SINE Alu -8 141 24 8 1281 2550 71 51 0 chrX 91353955 91354266 -75296030 + ORR1A2 LTR MaLR 1 327 0 8 1281 245 306 0 53 chrX 91354342 91354430 -75295866 - BC1_Mm scRNA scRNA -68 84 1 8 1281 520 191 95 0 chrX 91354448 91354553 -75295743 - B1F SINE Alu -1 148 34 8 1281 667 274 92 3 chrX 91354665 91354854 -75295442 - B3A SINE B2 -13 203 1 8 1281 306 308 0 13 chrX 91354959 91355038 -75295258 + ID4_ SINE ID 2 79 -4 8 1281 1053 38 0 0 chrX 91355479 91355611 -75294685 - B1_Mus1 SINE Alu -8 140 9 8 1281 576 112 204 9 chrX 91356777 91356885 -75293411 + B1_Mur4 SINE Alu 22 150 0 8 1281 346 179 170 133 chrX 91356913 91356947 -75293349 + B1_Mus1 SINE Alu 9 31 -117 8 1281 1298 48 0 0 chrX 91356947 91357094 -75293202 + B1_Mus2 SINE Alu 1 147 0 8 160 346 179 170 133 chrX 91357094 91357194 -75293102 + B1_Mus1 SINE Alu 32 148 0 8 1282 461 360 19 26 chrX 91357293 91357447 -75292849 - RSINE1 SINE B4 -1 164 12 8 1282 562 204 9 36 chrX 91357459 91357571 -75292725 - PB1D7 SINE Alu 0 120 12 8 1282 284 209 31 104 chrX 91357496 91357592 -75292704 - MT2B2 LTR ERVL -343 241 153 8 1282 299 288 30 0 chrX 91357730 91357796 -75292500 + ID4_ SINE ID 12 79 -4 8 1282 785 173 30 0 chrX 91357840 91357973 -75292323 - B1_Mur3 SINE Alu -7 142 6 8 1282 666 155 95 0 chrX 91358534 91358650 -75291646 + B1_Mus1 SINE Alu 21 147 -1 8 1282 253 242 83 8 chrX 91358679 91358800 -75291496 - L1M5 LINE L1 -1708 4438 4309 8 1282 439 242 55 54 chrX 91358841 91358981 -75291315 + ID_B1 SINE B4 83 224 0 8 1282 464 316 93 113 chrX 91359614 91360044 -75290252 - Kanga1d DNA Tc2 -64 545 134 8 1282 848 185 13 46 chrX 91360044 91360197 -75290099 + B1_Mur4 SINE Alu 2 149 -1 8 1282 464 316 93 113 chrX 91360197 91360322 -75289974 - Kanga1d DNA Tc2 -476 133 1 8 1282 333 367 23 29 chrX 91360433 91360607 -75289689 + ID_B1 SINE B4 25 197 -27 8 1282 761 241 49 64 chrX 91360647 91360851 -75289445 + ID_B1 SINE B4 1 201 -23 8 1282 185 83 28 0 chrX 91360862 91360898 -75289398 + (CAGAGA)n Simple_repeat Simple_repeat 3 39 0 8 1282 306 321 151 14 chrX 91361058 91361166 -75289130 + L1M5 LINE L1 4585 4710 -1436 8 1282 1149 103 0 0 chrX 91361166 91361312 -75288984 + B1_Mus2 SINE Alu 2 147 0 8 1282 306 321 151 14 chrX 91361312 91361421 -75288875 + L1M5 LINE L1 4711 4832 -1314 8 1282 474 211 239 0 chrX 91361424 91361533 -75288763 + RSINE1 SINE B4 2 136 -29 8 1282 227 229 315 34 chrX 91361533 91361573 -75288723 + B2_Mm1a SINE B2 1 191 -2 8 1282 428 252 60 80 chrX 91361685 91361836 -75288460 + B4 SINE B4 77 224 -68 8 1282 832 92 0 44 chrX 91361704 91361840 -75288456 + B1_Mus2 SINE Alu 18 147 0 8 1282 1757 55 9 0 chrX 91361841 91362059 -75288237 + L1_Mus1 LINE L1 6283 6502 -65 8 1282 209 217 0 0 chrX 91362064 91362110 -75288186 + A-rich Low_complexity Low_complexity 1 46 0 8 1282 459 269 139 25 chrX 91362250 91362741 -75287555 + L1M5 LINE L1 5199 5753 -371 8 1282 287 260 94 0 chrX 91362864 91362960 -75287336 - Charlie1b DNA MER1_type 0 523 419 8 1282 23 54 0 0 chrX 91363081 91363118 -75287178 + AT_rich Low_complexity Low_complexity 1 37 0 8 1282 566 318 108 14 chrX 91363157 91363380 -75286916 - Charlie1b DNA MER1_type -257 266 23 8 1282 809 188 28 7 chrX 91363416 91363561 -75286735 + B1_Mur4 SINE Alu 1 148 -2 8 1282 186 189 0 0 chrX 91363563 91363600 -75286696 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 8 1282 1203 65 0 0 chrX 91364168 91364301 -75285995 + B1_Mm SINE Alu 2 134 -13 8 1282 237 33 0 0 chrX 91364301 91364331 -75285965 + (CAA)n Simple_repeat Simple_repeat 1 30 0 8 1282 406 160 9 99 chrX 91364851 91364962 -75285334 + B1_Mur4 SINE Alu 50 150 0 8 1282 323 228 32 21 chrX 91365185 91365279 -75285017 + PB1D10 SINE Alu 23 117 0 9 1282 453 175 163 10 chrX 91365874 91365972 -75284324 - PB1D9 SINE Alu -7 113 1 9 1282 21 0 0 0 chrX 91367238 91367259 -75283037 + AT_rich Low_complexity Low_complexity 1 21 0 9 1282 301 317 145 21 chrX 91367854 91367999 -75282297 + L1M4b LINE L1 210 372 -6962 9 1282 208 135 18 55 chrX 91368765 91368820 -75281476 + (CCG)n Simple_repeat Simple_repeat 2 54 0 9 1282 207 0 0 0 chrX 91369113 91369136 -75281160 + (A)n Simple_repeat Simple_repeat 1 23 0 9 1282 22 0 0 0 chrX 91369226 91369248 -75281048 + AT_rich Low_complexity Low_complexity 1 22 0 9 1282 814 140 50 22 chrX 91369573 91369712 -75280584 - B1_Mur4 SINE Alu -2 148 6 9 1282 317 196 0 0 chrX 91369824 91369880 -75280416 - B1F1 SINE Alu -93 56 1 9 1282 229 349 102 19 chrX 91370047 91370155 -75280141 + PB1D7 SINE Alu 1 117 -3 9 1282 192 120 60 0 chrX 91370178 91370228 -75280068 + (TG)n Simple_repeat Simple_repeat 2 54 0 9 1282 270 209 163 11 chrX 91370228 91370320 -75279976 + U6 snRNA snRNA 1 106 -1 9 1282 1126 80 0 0 chrX 91370413 91370551 -75279745 + B1_Mus1 SINE Alu 2 139 -9 9 1282 207 0 0 0 chrX 91370551 91370574 -75279722 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 1282 353 274 32 5 chrX 91370694 91370802 -75279494 + PB1D10 SINE Alu 8 114 -34 9 1282 263 265 147 0 chrX 91371399 91371479 -75278817 + ID4 SINE ID 8 97 -55 9 1282 243 150 0 0 chrX 91371648 91371688 -75278608 + U2 snRNA snRNA 1 40 -148 9 1282 218 32 0 31 chrX 91371741 91371773 -75278523 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 9 1282 888 190 7 7 chrX 91371773 91371909 -75278387 - B1_Mur4 SINE Alu -13 137 1 9 1282 228 273 44 22 chrX 91371975 91372065 -75278231 + PB1D10 SINE Alu 17 108 -9 9 1282 1272 48 0 0 chrX 91372091 91372238 -75278058 - B1_Mus1 SINE Alu 0 148 2 9 1282 314 296 133 29 chrX 91372990 91373230 -75277066 + L1MC5 LINE L1 6670 6934 -851 9 1282 282 288 27 14 chrX 91373421 91373495 -75276801 - PB1D10 SINE Alu -1 116 42 9 1282 233 171 0 0 chrX 91373519 91373560 -75276736 + L1MB7 LINE L1 6121 6161 -23 9 1282 512 262 119 34 chrX 91373571 91373608 -75276688 + L1MC5 LINE L1 6970 7007 -954 9 1282 261 0 0 0 chrX 91373608 91373637 -75276659 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 9 1282 512 262 119 34 chrX 91373637 91373868 -75276428 + L1MC5 LINE L1 7008 7261 -700 9 1282 474 18 0 0 chrX 91373868 91373923 -75276373 + (TA)n Simple_repeat Simple_repeat 1 55 0 9 1282 398 235 2 11 chrX 91374303 91374399 -75275897 + ID4_ SINE ID 6 102 -50 9 1282 210 268 0 0 chrX 91374490 91374531 -75275765 - ID SINE ID -183 41 1 9 1282 339 271 15 109 chrX 91374566 91374703 -75275593 + MT2B LTR ERVL 134 257 -344 9 1282 820 171 16 0 chrX 91374606 91374735 -75275561 + B1_Mur1 SINE Alu 7 137 -12 9 1282 747 33 0 0 chrX 91374735 91374825 -75275471 + (GAA)n Simple_repeat Simple_repeat 2 91 0 9 1282 1654 62 0 0 chrX 91374833 91375026 -75275270 + B2_Mm1t SINE B2 1 193 0 9 1282 244 246 16 0 chrX 91375026 91375078 -75275218 + GA-rich Low_complexity Low_complexity 10 62 0 9 1282 944 183 77 20 chrX 91375125 91375320 -75274976 + B3 SINE B2 6 211 -5 9 1282 340 241 0 59 chrX 91375374 91375500 -75274796 - PB1D10 SINE Alu -1 116 2 9 1282 408 221 144 38 chrX 91375921 91376053 -75274243 + ID_B1 SINE B4 72 217 -7 9 1282 984 148 210 6 chrX 91376414 91376590 -75273706 - B3 SINE B2 0 216 5 9 1282 721 267 81 10 chrX 91376619 91376816 -75273480 - B3 SINE B2 -5 211 1 9 1282 423 0 0 0 chrX 91377452 91377499 -75272797 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 1282 255 98 49 0 chrX 91378121 91378182 -75272114 + (TG)n Simple_repeat Simple_repeat 1 64 0 9 1282 729 225 50 7 chrX 91378224 91378363 -75271933 - RSINE1 SINE B4 -19 146 2 9 1282 450 0 0 0 chrX 91378369 91378419 -75271877 + (TTTC)n Simple_repeat Simple_repeat 3 52 0 9 1282 377 342 0 0 chrX 91378464 91378575 -75271721 + PB1 SINE Alu 2 112 -15 9 1282 1503 56 45 0 chrX 91378588 91378767 -75271529 + B2_Mm2 SINE B2 1 187 -8 9 1282 478 280 15 0 chrX 91378960 91379092 -75271204 + B1_Mur1 SINE Alu 1 134 -15 9 1282 993 185 71 201 chrX 91379092 91379499 -75270797 + ORR1D1 LTR MaLR 2 355 -19 9 1282 322 106 0 0 chrX 91379513 91379560 -75270736 + ORR1D1-int LTR MaLR 5 51 -1458 9 1282 2135 147 113 11 chrX 91379575 91380008 -75270288 - RMER4B LTR ERVK -108 477 1 9 1282 5065 189 57 44 chrX 91380008 91381202 -75269094 + ORR1D1-int LTR MaLR 161 1370 0 9 1282 296 164 0 0 chrX 91381202 91381257 -75269039 + ORR1D1 LTR MaLR 1 55 -329 9 1282 393 102 0 0 chrX 91381300 91381359 -75268937 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 9 1282 251 171 327 0 chrX 91381369 91381459 -75268837 + PB1D10 SINE Alu 1 117 0 9 1282 1271 48 0 0 chrX 91381522 91381668 -75268628 - B1_Mm SINE Alu -1 146 1 9 1282 901 230 57 24 chrX 91381738 91381913 -75268383 - B3 SINE B2 0 216 30 9 1282 1437 95 11 0 chrX 91381913 91382103 -75268193 - B2_Mm1t SINE B2 0 193 2 9 1282 901 230 57 24 chrX 91382103 91382136 -75268160 - B3 SINE B2 -187 29 2 9 1282 1051 161 194 0 chrX 91382235 91382415 -75267881 - B3 SINE B2 0 216 2 9 1282 1484 66 28 0 chrX 91382674 91382856 -75267440 + B2_Mm2 SINE B2 1 187 -8 9 1282 874 66 205 0 chrX 91382864 91382986 -75267310 + B1_Mus1 SINE Alu 2 148 0 9 1282 27 29 0 0 chrX 91382986 91383020 -75267276 + AT_rich Low_complexity Low_complexity 1 34 0 9 1282 256 356 0 0 chrX 91383128 91383218 -75267078 - Charlie10 DNA MER1_type -2718 104 15 9 1282 527 183 71 71 chrX 91383420 91383532 -75266764 + B1_Mur2 SINE Alu 11 122 -27 9 1282 468 0 0 0 chrX 91383965 91384017 -75266279 + (GA)n Simple_repeat Simple_repeat 1 52 0 9 1282 471 18 0 0 chrX 91385193 91385249 -75265047 + (TG)n Simple_repeat Simple_repeat 1 56 0 9 1282 806 306 119 104 chrX 91385273 91385788 -75264508 - L1M4b LINE L1 -5446 1458 841 9 1282 402 66 0 0 chrX 91385788 91385849 -75264447 - B2_Mm1a SINE B2 -6 187 127 9 1282 806 306 119 104 chrX 91385849 91385884 -75264412 - L1M4b LINE L1 -5446 840 797 9 1282 1441 79 11 0 chrX 91385884 91386061 -75264235 - B2_Mm1t SINE B2 -14 179 1 9 1282 806 313 135 118 chrX 91386061 91386526 -75263770 - L1M4b LINE L1 -6538 796 323 9 1282 387 318 30 8 chrX 91386664 91386797 -75263499 - L1M4b LINE L1 -7063 271 136 9 1282 375 244 0 24 chrX 91386854 91386938 -75263358 - PB1D10 SINE Alu 0 117 36 9 1282 237 65 0 0 chrX 91386961 91386992 -75263304 + (T)n Simple_repeat Simple_repeat 1 31 0 9 1282 283 273 69 61 chrX 91386992 91387110 -75263186 - PB1D7 SINE Alu 0 149 3 9 1282 891 222 91 29 chrX 91387153 91387362 -75262934 - ID_B1 SINE B4 -2 222 1 9 1282 463 248 169 75 chrX 91387714 91388097 -75262199 + MLT1D LTR MaLR 51 505 0 9 1282 226 302 18 28 chrX 91388108 91388217 -75262079 - Lx4A LINE L1 -2043 5952 5845 9 1282 676 175 66 8 chrX 91388218 91388339 -75261957 + B1_Mur1 SINE Alu 2 129 -20 9 1282 310 184 36 26 chrX 91388418 91388515 -75261781 - Lx4A LINE L1 -549 5810 5695 9 1282 317 193 88 24 chrX 91388659 91388754 -75261542 - Lx4A LINE L1 -2042 5743 5643 9 1282 267 103 0 0 chrX 91388976 91389015 -75261281 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 1282 303 312 97 48 chrX 91389403 91389548 -75260748 - ERVL-E-int LTR ERVL -2106 3561 3410 9 1282 516 304 0 12 chrX 91389776 91389936 -75260360 - MER20B DNA MER1_type -343 440 283 9 1282 277 189 105 26 chrX 91389944 91390020 -75260276 + U6 snRNA snRNA 3 84 -23 9 1282 345 322 67 126 chrX 91390079 91390138 -75260158 - MER20B DNA MER1_type -539 244 190 9 1282 1357 69 36 31 chrX 91390138 91390332 -75259964 + B2_Mm2 SINE B2 1 195 0 9 1282 345 322 67 126 chrX 91390332 91390510 -75259786 - MER20B DNA MER1_type -594 189 21 9 1282 232 295 81 69 chrX 91390596 91390756 -75259540 + Charlie25 DNA MER1_type 2113 2274 -250 9 1282 631 250 29 0 chrX 91390829 91390965 -75259331 - B1_Mur1 SINE Alu 0 149 10 9 1282 430 216 44 26 chrX 91390966 91391080 -75259216 - L1MA9 LINE L1 -474 5838 5723 9 1282 405 153 69 0 chrX 91391130 91391202 -75259094 - PB1D9 SINE Alu -43 77 1 9 1282 294 29 0 0 chrX 91391543 91391578 -75258718 + (TATG)n Simple_repeat Simple_repeat 2 36 0 9 1282 746 230 120 0 chrX 91391584 91391775 -75258521 - ID_B1 SINE B4 -9 215 2 9 1282 658 276 25 13 chrX 91391875 91392033 -75258263 - RSINE1 SINE B4 0 165 6 9 1282 474 18 0 0 chrX 91392034 91392089 -75258207 + (TC)n Simple_repeat Simple_repeat 2 56 0 9 1282 261 241 0 0 chrX 91392109 91392163 -75258133 - PB1D7 SINE Alu -21 99 46 9 1282 302 287 40 0 chrX 91392229 91392329 -75257967 + MLT1E1 LTR MaLR 254 390 -264 9 1282 925 158 11 0 chrX 91392417 91392594 -75257702 + GA-rich Low_complexity Low_complexity 2 180 0 9 1282 287 226 0 0 chrX 91392594 91392656 -75257640 - tRNA-Ala-GCY_ tRNA tRNA -1 74 13 9 1282 323 22 0 0 chrX 91392702 91392748 -75257548 - L1Md_T LINE L1 -1 6581 6536 9 1282 280 256 12 47 chrX 91392963 91393049 -75257247 - B3A SINE B2 -107 91 9 9 1282 391 164 0 0 chrX 91393362 91393435 -75256861 - B1_Mur4 SINE Alu -3 147 75 9 1282 498 218 27 0 chrX 91393626 91393736 -75256560 + RSINE1 SINE B4 6 118 -47 9 1282 762 194 7 71 chrX 91393856 91394011 -75256285 + B1_Mur3 SINE Alu 2 146 -3 9 1282 349 293 48 8 chrX 91394485 91394609 -75255687 + B4A SINE B4 102 230 -62 9 1282 563 203 15 45 chrX 91394609 91394743 -75255553 + B1_Mur2 SINE Alu 1 130 -19 9 1282 297 304 35 75 chrX 91394743 91394817 -75255479 + B4 SINE B4 230 292 0 9 1282 484 158 0 0 chrX 91395476 91395552 -75254744 - B1_Mur1 SINE Alu -32 117 42 9 1282 308 236 60 108 chrX 91395975 91396141 -75254155 + RSINE1 SINE B4 6 163 -2 9 1282 198 0 0 0 chrX 91396151 91396173 -75254123 + (A)n Simple_repeat Simple_repeat 1 22 0 9 1282 486 232 46 39 chrX 91396183 91396313 -75253983 + B1_Mur2 SINE Alu 1 131 -18 9 1282 463 283 50 34 chrX 91396300 91396479 -75253817 + ID_B1 SINE B4 43 224 0 9 1282 228 253 128 39 chrX 91396525 91396681 -75253615 + Lx8 LINE L1 5780 5949 -1524 9 1282 497 208 76 190 chrX 91396755 91396884 -75253412 + B3 SINE B2 1 113 -103 1 1282 733 200 7 14 chrX 91396884 91397031 -75253265 - B1_Mur3 SINE Alu 0 149 4 1 1282 497 208 76 190 chrX 91397031 91397138 -75253158 + B3 SINE B2 114 210 -6 1 1282 306 0 0 0 chrX 91397454 91397488 -75252808 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1282 239 356 62 6 chrX 91397681 91397892 -75252404 + L1MEf LINE L1 755 934 -5706 1 1282 254 236 108 27 chrX 91398027 91398101 -75252195 + ID4 SINE ID 3 82 -1 1 1282 232 333 41 10 chrX 91398129 91398226 -75252070 + L1MEf LINE L1 1110 1209 -5431 1 1282 614 231 112 56 chrX 91398235 91398432 -75251864 - B3 SINE B2 -5 211 4 1 1282 213 280 0 0 chrX 91398579 91398629 -75251667 - BC1_Mm scRNA scRNA -71 81 32 1 1282 781 177 49 21 chrX 91398689 91398833 -75251463 + B1_Mur2 SINE Alu 1 148 -1 1 1282 428 244 42 0 chrX 91398843 91398962 -75251334 + B1F SINE Alu 26 149 0 1 1282 236 130 43 0 chrX 91399067 91399113 -75251183 - MLT2D LTR ERVL -8 554 507 1 1282 788 282 67 34 chrX 91399114 91399411 -75250885 - MLT2D LTR ERVL -95 319 13 1 1282 267 226 19 0 chrX 91399412 91399465 -75250831 + RSINE1 SINE B4 13 66 -99 1 1282 508 275 105 0 chrX 91399480 91399651 -75250645 + L1MB7 LINE L1 5828 6016 -168 1 1282 494 260 21 41 chrX 91399800 91399872 -75250424 + ID SINE ID 1 77 -147 1 1282 213 322 43 43 chrX 91399872 91399966 -75250330 + B1_Mus2 SINE Alu 1 94 -53 1 1282 341 177 19 0 chrX 91399975 91400052 -75250244 + L1MB7 LINE L1 6037 6117 -63 1 1282 777 213 7 0 chrX 91400269 91400410 -75249886 + B1F SINE Alu 1 142 -7 1 1282 696 169 38 8 chrX 91400423 91400554 -75249742 + B1_Mur2 SINE Alu 1 135 -14 1 1282 342 0 0 0 chrX 91400554 91400592 -75249704 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1 1282 927 150 7 13 chrX 91400772 91400921 -75249375 - B1_Mur4 SINE Alu -1 149 2 1 1282 463 281 14 21 chrX 91401086 91401228 -75249068 + MLT1D LTR MaLR 365 505 0 1 1282 789 246 107 7 chrX 91401228 91401498 -75248798 + L1MEf LINE L1 3018 3314 -3230 1 1282 356 270 20 10 chrX 91401516 91401617 -75248679 + L1MB2 LINE L1 5894 5995 -176 1 1282 646 224 42 7 chrX 91401635 91401779 -75248517 + B1F2 SINE Alu 1 149 0 1 1282 23 0 0 0 chrX 91401782 91401805 -75248491 + AT_rich Low_complexity Low_complexity 1 23 0 1 1282 498 317 6 46 chrX 91401856 91401983 -75248313 - ID_B1 SINE B4 -25 199 79 1 1282 336 24 0 0 chrX 91401983 91402024 -75248272 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1 1282 498 317 6 46 chrX 91402024 91402071 -75248225 - ID SINE ID -146 78 32 1 1282 357 278 179 43 chrX 91402098 91402223 -75248073 - ID_B1 SINE B4 0 224 72 1 1282 432 0 0 0 chrX 91402223 91402271 -75248025 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1282 357 278 179 43 chrX 91402271 91402329 -75247967 - ID SINE ID -153 71 16 1 1282 237 279 48 9 chrX 91402336 91402441 -75247855 + L1MB2 LINE L1 6021 6129 -42 1 1282 661 274 0 68 chrX 91402441 91402617 -75247679 + RSINE1 SINE B4 2 165 0 1 1282 779 182 215 6 chrX 91402666 91402843 -75247453 + B3 SINE B2 3 216 0 1 1282 245 276 19 9 chrX 91403029 91403135 -75247161 + L1M4 LINE L1 3033 3139 -3007 1 1282 570 217 95 12 chrX 91403440 91403608 -75246688 + L1M4 LINE L1 3287 3468 -2678 1 1282 213 121 0 0 chrX 91403609 91403642 -75246654 + (T)n Simple_repeat Simple_repeat 1 33 0 1 1282 1024 75 0 15 chrX 91403705 91403841 -75246455 + B1_Mm SINE Alu 2 135 -12 1 1282 204 40 0 0 chrX 91403843 91403868 -75246428 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 1 1282 362 214 65 57 chrX 91403881 91404005 -75246291 - B1F SINE Alu 0 149 25 1 1282 1675 214 84 17 chrX 91404180 91404694 -75245602 + L1MB5 LINE L1 5547 6114 -60 1 1282 2764 76 0 13 chrX 91404694 91405067 -75245229 - L1Md_F2 LINE L1 -13 6569 6202 1 1282 1675 230 58 31 chrX 91405067 91405141 -75245155 + L1MB5 LINE L1 6114 6180 0 1 1282 351 196 142 38 chrX 91405135 91405241 -75245055 + L1M4 LINE L1 3776 3892 -2254 1 1282 3204 145 12 24 chrX 91405282 91405861 -75244435 + RMER4B LTR ERVK 13 584 -1 1 1282 884 202 90 0 chrX 91405862 91406040 -75244256 - B3 SINE B2 -15 201 8 1 1282 587 256 0 0 chrX 91406049 91406186 -75244110 - ID_B1 SINE B4 -4 220 84 1 1282 378 221 169 128 chrX 91406191 91406264 -75244032 + L1M4 LINE L1 3895 3957 -2189 1 1282 748 209 108 36 chrX 91406264 91406458 -75243838 + B3 SINE B2 4 211 -5 1 1282 378 221 169 128 chrX 91406458 91406633 -75243663 + L1M4 LINE L1 3958 4153 -1993 1 1282 338 234 0 72 chrX 91406719 91406802 -75243494 + B3A SINE B2 1 77 -121 1 1282 3538 178 127 22 chrX 91406876 91407727 -75242569 + RMER19B LTR ERVK 1 902 0 1 1282 685 242 281 12 chrX 91407822 91408261 -75242035 + L1MD LINE L1 5044 5607 -635 1 1282 274 250 29 0 chrX 91408378 91408446 -75241850 + ID4_ SINE ID 1 70 -13 1 1282 180 111 0 0 chrX 91408452 91408479 -75241817 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1282 365 225 96 25 chrX 91408587 91408705 -75241591 + L1M4 LINE L1 4119 4243 -1903 1 1282 265 140 20 0 chrX 91408705 91408755 -75241541 + B1_Mus2 SINE Alu 97 147 0 1 1282 204 40 0 0 chrX 91408812 91408837 -75241459 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1282 1601 21 5 21 chrX 91408841 91409034 -75241262 - B2_Mm1a SINE B2 -3 190 1 1 1282 851 145 7 52 chrX 91409153 91409306 -75240990 - B1_Mus1 SINE Alu -2 146 1 1 1282 610 284 96 14 chrX 91409324 91409617 -75240679 + L1M4 LINE L1 4350 4666 -1480 1 1282 352 278 11 32 chrX 91409640 91409733 -75240563 + ID_B1 SINE B4 2 92 -132 1 1282 283 285 80 23 chrX 91409734 91409910 -75240386 + L1M4 LINE L1 5031 5216 -930 1 1282 1163 42 6 29 chrX 91409958 91410131 -75240165 - L1Md_F3 LINE L1 0 6584 6416 1 1282 242 208 0 0 chrX 91410243 91410296 -75240000 + GA-rich Low_complexity Low_complexity 2 54 0 1 1282 700 236 0 7 chrX 91410444 91410593 -75239703 + B1_Mur1 SINE Alu 2 149 0 1 1282 426 233 132 0 chrX 91410622 91410751 -75239545 + ID_B1 SINE B4 78 223 -1 1 1282 1381 78 5 59 chrX 91410756 91410959 -75239337 + B2_Mm1a SINE B2 2 193 0 1 1282 855 141 7 7 chrX 91410972 91411115 -75239181 + B1_Mus1 SINE Alu 5 147 -1 1 1282 251 246 58 58 chrX 91411140 91411209 -75239087 + ID4_ SINE ID 2 70 -13 1 1282 342 0 0 0 chrX 91411210 91411248 -75239048 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1282 611 310 83 7 chrX 91411293 91411582 -75238714 + L1M4 LINE L1 5376 5686 -498 1 1282 1184 185 82 4 chrX 91411637 91411870 -75238426 - Lx5 LINE L1 -4 7046 6796 1 1282 22 35 0 0 chrX 91411918 91411947 -75238349 + AT_rich Low_complexity Low_complexity 1 29 0 1 1282 748 221 0 69 chrX 91412006 91412181 -75238115 + RSINE1 SINE B4 3 165 0 1 1282 257 343 19 0 chrX 91412288 91412396 -75237900 + L1ME2 LINE L1 6026 6135 -29 1 1282 1110 52 0 0 chrX 91412439 91412573 -75237723 + B1_Mus2 SINE Alu 1 134 -13 1 1282 192 40 0 0 chrX 91412573 91412598 -75237698 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1 1282 213 39 0 0 chrX 91412742 91412768 -75237528 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1282 282 189 0 0 chrX 91412776 91412829 -75237467 + L1M5 LINE L1 3172 3224 -2922 1 1282 1017 126 0 0 chrX 91412829 91412972 -75237324 + B1_Mus1 SINE Alu 1 143 -5 1 1282 462 18 0 0 chrX 91413262 91413317 -75236979 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1282 384 40 0 0 chrX 91413317 91413366 -75236930 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 1282 460 300 45 26 chrX 91413501 91413655 -75236641 - B3 SINE B2 -12 204 48 1 1282 377 115 0 80 chrX 91413688 91413801 -75236495 + (TTTA)n Simple_repeat Simple_repeat 1 104 0 1 1282 252 0 0 0 chrX 91413834 91413862 -75236434 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1 1282 288 0 0 0 chrX 91413895 91413927 -75236369 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1 1282 324 0 0 0 chrX 91413960 91413996 -75236300 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1 1282 252 0 0 0 chrX 91414029 91414057 -75236239 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1 1282 396 0 0 0 chrX 91414090 91414134 -75236162 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1 1282 288 0 0 0 chrX 91414167 91414199 -75236097 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1 1282 324 0 0 0 chrX 91414232 91414268 -75236028 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1 1282 360 0 0 0 chrX 91414301 91414341 -75235955 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1 1282 288 0 0 0 chrX 91414374 91414406 -75235890 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1 1282 324 0 0 0 chrX 91414439 91414475 -75235821 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1 1282 252 0 0 0 chrX 91414508 91414536 -75235760 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1 1282 216 0 0 0 chrX 91414569 91414593 -75235703 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1 1282 319 260 37 46 chrX 91414593 91414626 -75235670 - B1_Mur1 SINE Alu -12 137 108 1 1282 360 0 0 0 chrX 91414626 91414666 -75235630 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1 1282 319 260 37 46 chrX 91414666 91414741 -75235555 - B1_Mur1 SINE Alu -42 107 30 1 1282 294 224 70 12 chrX 91414795 91414881 -75235415 - PB1D7 SINE Alu 0 120 30 1 1282 326 176 65 76 chrX 91414925 91415017 -75235279 - PB1D9 SINE Alu 0 120 30 1 1282 518 168 103 0 chrX 91415066 91415173 -75235123 - PB1D9 SINE Alu -2 118 1 1 1282 446 321 0 0 chrX 91415288 91415400 -75234896 + PB1D10 SINE Alu 6 117 0 1 1282 1195 49 0 0 chrX 91415805 91415947 -75234349 - B1_Mus1 SINE Alu -6 142 1 1 1282 453 182 405 0 chrX 91415965 91416113 -75234183 - B3 SINE B2 -7 209 2 1 1282 215 31 31 0 chrX 91416113 91416145 -75234151 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1282 209 125 25 0 chrX 91416186 91416226 -75234070 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 1 1282 216 122 0 0 chrX 91416266 91416307 -75233989 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1282 429 191 124 26 chrX 91416307 91416420 -75233876 - RSINE1 SINE B4 -41 124 1 1 1282 308 211 156 0 chrX 91416462 91416551 -75233745 - B1F SINE Alu 0 149 47 1 1282 795 226 24 6 chrX 91416551 91416720 -75233576 + B3A SINE B2 2 173 -25 1 1282 25 31 0 0 chrX 91416765 91416797 -75233499 + AT_rich Low_complexity Low_complexity 1 32 0 1 1282 976 71 110 0 chrX 91416857 91417011 -75233285 - B2_Mm1t SINE B2 -22 171 1 1 1282 382 256 0 0 chrX 91417099 91417181 -75233115 - ID4_ SINE ID 0 83 2 1 1282 251 258 90 30 chrX 91417198 91417298 -75232998 - PB1 SINE Alu -1 126 21 1 1282 936 46 130 8 chrX 91417384 91417515 -75232781 + B1_Mus1 SINE Alu 2 148 0 1 1282 819 254 11 0 chrX 91417551 91417728 -75232568 + B3 SINE B2 34 212 -4 1 1282 707 229 67 45 chrX 91417754 91417932 -75232364 - B3 SINE B2 -34 182 1 1 1282 295 259 141 0 chrX 91417967 91418052 -75232244 - B3 SINE B2 -4 212 116 1 1282 991 109 96 0 chrX 91418052 91418208 -75232088 - RMER4B LTR ERVK 0 585 415 1 1282 1275 105 26 5 chrX 91418217 91418408 -75231888 - B2_Mm2 SINE B2 0 195 1 1 1282 592 207 0 90 chrX 91418453 91418544 -75231752 - B3 SINE B2 -95 121 36 1 1282 1437 86 5 0 chrX 91418544 91418730 -75231566 - B2_Mm1a SINE B2 -5 188 2 1 1282 592 207 0 90 chrX 91418730 91418771 -75231525 - B3 SINE B2 -181 35 1 1 1282 21 36 0 0 chrX 91418774 91418802 -75231494 + AT_rich Low_complexity Low_complexity 1 28 0 1 1282 1146 71 0 0 chrX 91418806 91418947 -75231349 + B1_Mus1 SINE Alu 2 142 -6 1 1282 1200 165 5 10 chrX 91419188 91419396 -75230900 + MTC LTR MaLR 1 207 -214 1 1282 1040 109 0 13 chrX 91419400 91419558 -75230738 + B2_Mm2 SINE B2 3 158 -37 1 1282 590 93 12 0 chrX 91419580 91419666 -75230630 + B2_Mm2 SINE B2 74 160 -35 1 1282 1005 39 55 0 chrX 91419761 91419888 -75230408 + B1_Mus2 SINE Alu 2 135 -12 1 1282 249 33 0 0 chrX 91419890 91419920 -75230376 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 1282 198 103 0 0 chrX 91420449 91420478 -75229818 + (GAAA)n Simple_repeat Simple_repeat 1 29 0 1 1282 1177 169 23 5 chrX 91420479 91420693 -75229603 + MTC LTR MaLR 196 413 -8 1 1282 755 144 74 22 chrX 91420948 91421083 -75229213 - B1_Mur4 SINE Alu -6 144 3 1 1282 543 205 52 48 chrX 91421381 91421403 -75228893 - ID_B1 SINE B4 -39 253 158 1 1282 1016 58 7 7 chrX 91421403 91421543 -75228753 - B1_Mus1 SINE Alu 0 148 9 1 1282 543 205 52 48 chrX 91421543 91421562 -75228734 - ID_B1 SINE B4 -39 157 64 1 1282 446 252 97 7 chrX 91421544 91421688 -75228608 - B3 SINE B2 -10 206 50 1 1282 398 276 98 94 chrX 91421757 91421809 -75228487 - B4 SINE B4 -12 280 112 1 1282 816 84 0 0 chrX 91421809 91421928 -75228368 - B1_Mus1 SINE Alu -2 146 28 1 1282 967 90 0 121 chrX 91421929 91422094 -75228202 - B1_Mus1 SINE Alu -1 147 3 1 1282 398 276 98 94 chrX 91422094 91422197 -75228099 - B4 SINE B4 -182 110 4 1 1282 315 210 186 39 chrX 91422415 91422544 -75227752 + B1F SINE Alu 1 148 -1 1 1282 33 0 0 0 chrX 91423543 91423576 -75226720 + GC_rich Low_complexity Low_complexity 1 33 0 1 1282 31 0 0 0 chrX 91424048 91424079 -75226217 + AT_rich Low_complexity Low_complexity 1 31 0 1 1282 1114 88 0 0 chrX 91424087 91424234 -75226062 + B1_Mus1 SINE Alu 2 148 0 1 1282 908 85 85 0 chrX 91424300 91424441 -75225855 + B2_Mm2 SINE B2 2 154 -41 1 1282 207 0 0 0 chrX 91424442 91424465 -75225831 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 1 1282 325 340 25 60 chrX 91424486 91424568 -75225728 + B3A SINE B2 2 84 -114 1 1282 1042 82 0 58 chrX 91424568 91424723 -75225573 + B1_Mm SINE Alu 2 147 0 1 1282 325 340 25 60 chrX 91424723 91424840 -75225456 + B3A SINE B2 85 193 -5 1 1282 888 166 14 0 chrX 91424859 91424998 -75225298 + B1_Mur4 SINE Alu 1 141 -9 1 1282 349 219 20 59 chrX 91425031 91425133 -75225163 - B3 SINE B2 -19 197 100 1 1282 21 0 0 0 chrX 91425178 91425199 -75225097 + AT_rich Low_complexity Low_complexity 1 21 0 1 1282 615 159 9 26 chrX 91425205 91425321 -75224975 + B1_Mur1 SINE Alu 36 149 0 1 1282 387 0 0 0 chrX 91425370 91425413 -75224883 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1282 210 250 254 15 chrX 91425418 91425548 -75224748 - B3A SINE B2 -36 162 2 1 1282 515 262 62 34 chrX 91425582 91425728 -75224568 + RSINE1 SINE B4 2 151 -14 1 1282 719 85 57 78 chrX 91425968 91426109 -75224187 - B1_Mur4 SINE Alu 0 150 13 1 1282 1612 42 11 0 chrX 91426266 91426455 -75223841 - B2_Mm1a SINE B2 -2 191 1 1 1282 311 0 0 25 chrX 91426466 91426506 -75223790 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1282 316 39 269 0 chrX 91426506 91426558 -75223738 - B1_Mm SINE Alu -10 137 72 1 1282 1070 43 50 0 chrX 91426561 91426701 -75223595 - B1_Mm SINE Alu 0 147 1 1 1282 270 282 129 0 chrX 91426889 91426974 -75223322 - PB1D7 SINE Alu -8 112 17 1 1282 223 289 78 13 chrX 91427069 91427146 -75223150 - ID4 SINE ID 0 83 2 1 1282 207 0 0 0 chrX 91427225 91427248 -75223048 + (TTG)n Simple_repeat Simple_repeat 1 23 0 1 1282 245 77 0 71 chrX 91427248 91427290 -75223006 - B1_Mus2 SINE Alu -12 135 97 1 1282 3012 268 135 58 chrX 91427291 91427786 -75222510 + MTEb-int LTR MaLR 141 695 -885 1 1282 1373 70 38 0 chrX 91427786 91427972 -75222324 + B2_Mm1t SINE B2 1 193 0 1 1282 3012 268 135 58 chrX 91427972 91428125 -75222171 + MTEb-int LTR MaLR 696 831 -749 1 1282 973 73 81 0 chrX 91428125 91428261 -75222035 + B1_Mus2 SINE Alu 1 147 0 1 1282 3012 268 135 58 chrX 91428261 91428948 -75221348 + MTEb-int LTR MaLR 832 1580 0 1 1282 389 212 40 52 chrX 91428948 91429072 -75221224 + MTEb LTR MaLR 1 122 -257 1 1282 1689 32 0 0 chrX 91429463 91429652 -75220644 + B2_Mm1a SINE B2 1 189 -4 1 1282 485 311 78 10 chrX 91429897 91430089 -75220207 + B3 SINE B2 5 209 -7 1 1282 2576 56 17 23 chrX 91430113 91430458 -75219838 - L1_Mus1 LINE L1 0 6567 6225 1 1282 698 176 99 6 chrX 91430594 91430765 -75219531 - B2_Mm2 SINE B2 -8 187 1 1 1282 1452 70 16 5 chrX 91430811 91430998 -75219298 - B2_Mm2 SINE B2 -6 189 1 1 1282 24 53 0 0 chrX 91431007 91431045 -75219251 + AT_rich Low_complexity Low_complexity 1 38 0 1 1282 946 70 8 0 chrX 91431045 91431173 -75219123 + B2_Mm2 SINE B2 2 130 -65 1 1282 1418 86 11 0 chrX 91431210 91431397 -75218899 + B2_Mm2 SINE B2 1 189 -6 1 1282 340 262 87 0 chrX 91431468 91431571 -75218725 - PB1D10 SINE Alu -5 112 1 1 1282 4648 141 92 7 chrX 91431597 91432543 -75217753 + Lx4A LINE L1 5960 7049 -1 1 1282 1263 109 38 0 chrX 91432740 91432924 -75217372 - B2_Mm2 SINE B2 -3 192 2 1 1282 1684 37 0 0 chrX 91433075 91433266 -75217030 - B2_Mm1a SINE B2 -1 192 2 1 1282 3098 18 2 18 chrX 91433266 91433376 -75216920 - MTA_Mm LTR MaLR -4 392 289 1 1282 2303 78 119 11 chrX 91433376 91433728 -75216568 + RLTR10 LTR ERVK 1 390 0 1 1282 3098 18 2 18 chrX 91433728 91434015 -75216281 - MTA_Mm LTR MaLR -108 288 1 1 1282 216 86 0 0 chrX 91434145 91434180 -75216116 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1282 272 287 102 45 chrX 91435407 91435564 -75214732 + RMER1B Other Other 217 382 -684 1 1282 291 203 102 0 chrX 91435544 91435603 -75214693 + RMER1A Other Other 176 240 -790 1 1282 282 231 0 0 chrX 91435619 91435671 -75214625 + RMER1A Other Other 300 351 -679 1 1282 1276 135 396 0 chrX 91435673 91436029 -75214267 + RMER1A Other Other 534 1030 0 1 1282 1136 76 0 0 chrX 91436459 91436603 -75213693 + B1_Mus2 SINE Alu 3 146 -1 1 1282 228 130 0 0 chrX 91436604 91436650 -75213646 + (A)n Simple_repeat Simple_repeat 1 46 0 1 1282 325 307 94 8 chrX 91436676 91436804 -75213492 + ID_B1 SINE B4 86 224 0 1 1282 434 213 101 9 chrX 91436807 91436916 -75213380 + PB1D9 SINE Alu 2 120 0 1 1282 645 227 169 6 chrX 91436927 91437104 -75213192 + B3 SINE B2 6 211 -5 1 1282 196 30 61 0 chrX 91437130 91437163 -75213133 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1282 566 257 34 14 chrX 91437269 91437415 -75212881 - B1_Mur2 SINE Alu 0 149 1 1 1282 730 191 0 15 chrX 91437584 91437717 -75212579 + B1_Mur4 SINE Alu 7 137 -13 1 1282 524 266 70 62 chrX 91438320 91438561 -75211735 + L1MC4 LINE L1 6822 7064 -978 1 1282 399 132 117 21 chrX 91438949 91439058 -75211238 + B2_Mm1t SINE B2 2 114 -84 1 1282 626 147 43 52 chrX 91439087 91439202 -75211094 - PB1D9 SINE Alu -6 114 1 1 1282 745 139 106 39 chrX 91439225 91439237 -75211059 - B2_Mm2 SINE B2 -2 193 182 1 1282 1153 48 7 7 chrX 91439237 91439384 -75210912 - B1_Mm SINE Alu 0 147 1 1 1282 745 139 106 39 chrX 91439384 91439551 -75210745 - B2_Mm2 SINE B2 -14 181 3 1 1282 916 241 55 0 chrX 91439568 91439767 -75210529 - B3 SINE B2 -4 212 3 1 1282 258 254 63 0 chrX 91439774 91439837 -75210459 - B1F SINE Alu -4 145 79 1 1282 395 35 17 0 chrX 91439862 91439920 -75210376 + B2_Mm1t SINE B2 121 179 -14 1 1282 337 95 368 19 chrX 91439967 91440073 -75210223 + B2_Mm2 SINE B2 47 189 -6 1 1282 1137 68 0 20 chrX 91440098 91440248 -75210048 + B1_Mus2 SINE Alu 1 147 0 1 1282 195 42 0 0 chrX 91440259 91440283 -75210013 + (GAAA)n Simple_repeat Simple_repeat 3 26 0 1 1282 673 115 19 0 chrX 91440482 91440586 -75209710 - B3 SINE B2 -110 106 1 1 1282 355 232 0 112 chrX 91440608 91440621 -75209675 + MT2B LTR ERVL 155 244 -352 1 1282 596 157 0 0 chrX 91440621 91440710 -75209586 + PB1D9 SINE Alu 1 89 -31 1 1282 661 245 0 33 chrX 91440804 91440956 -75209340 - B1_Mus1 SINE Alu 0 148 2 1 1282 223 170 0 0 chrX 91440963 91441010 -75209286 + (TAA)n Simple_repeat Simple_repeat 2 48 0 1 1282 577 222 133 56 chrX 91441026 91441169 -75209127 + RSINE1 SINE B4 12 165 0 1 1282 213 357 0 0 chrX 91441189 91441245 -75209051 + RSINE1 SINE B4 28 83 -82 1 1282 456 19 0 0 chrX 91441274 91441327 -75208969 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1282 644 171 116 0 chrX 91441841 91441970 -75208326 + B1_Mur2 SINE Alu 5 148 -1 1 1282 350 273 61 0 chrX 91442070 91442169 -75208127 - PB1D9 SINE Alu -15 105 1 1 1282 343 184 346 78 chrX 91442178 91442331 -75207965 - B2_Mm2 SINE B2 0 195 2 1 1282 1121 82 7 0 chrX 91442354 91442500 -75207796 - B1_Mus2 SINE Alu 0 147 1 1 1282 535 114 229 34 chrX 91442958 91443076 -75207220 - B1_Mur3 SINE Alu 0 149 9 1 1282 330 213 27 0 chrX 91443085 91443160 -75207136 - PB1D9 SINE Alu -2 118 42 1 1282 542 215 123 26 chrX 91443250 91443431 -75206865 - B3 SINE B2 -8 187 10 1 1282 400 260 120 77 chrX 91443445 91443628 -75206668 - B3A SINE B2 -1 197 7 1 1282 293 307 71 21 chrX 91443688 91443828 -75206468 + B1F1 SINE Alu 2 148 -1 1 1282 870 230 73 20 chrX 91443832 91444036 -75206260 + B3 SINE B2 1 215 -1 1 1282 344 289 0 0 chrX 91444074 91444150 -75206146 + ID4_ SINE ID 8 83 0 1 1282 407 304 9 0 chrX 91444325 91444437 -75205859 + PB1D7 SINE Alu 1 113 -7 1 1282 1479 66 28 0 chrX 91444444 91444625 -75205671 + B2_Mm2 SINE B2 2 187 -8 1 1282 456 264 0 0 chrX 91444629 91444716 -75205580 + PB1D9 SINE Alu 1 87 -33 1 1282 653 216 132 26 chrX 91444766 91444956 -75205340 + B3 SINE B2 2 211 -5 1 1282 314 235 0 0 chrX 91445320 91445388 -75204908 - B1_Mus1 SINE Alu -41 107 40 1 1282 783 173 83 0 chrX 91445447 91445580 -75204716 - B1_Mus2 SINE Alu -3 144 1 1 1282 24 0 0 0 chrX 91445580 91445604 -75204692 + AT_rich Low_complexity Low_complexity 1 24 0 1 1282 620 209 29 69 chrX 91445614 91445813 -75204483 + B3 SINE B2 7 191 -4 1 1282 299 191 0 0 chrX 91445980 91446027 -75204269 + PB1D9 SINE Alu 3 49 -71 1 1282 416 310 61 40 chrX 91446040 91446188 -75204108 + RSINE1 SINE B4 3 153 -12 1 1282 201 47 0 65 chrX 91446471 91446517 -75203779 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 1 1282 469 125 105 9 chrX 91446548 91446653 -75203643 + B2_Mm2 SINE B2 81 195 0 1 1282 1256 212 80 9 chrX 91446812 91447095 -75203201 + RLTR20A2 LTR ERVK 181 488 -90 1 1282 207 0 0 0 chrX 91447095 91447118 -75203178 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1282 1256 212 80 9 chrX 91447118 91447158 -75203138 + RLTR20A2 LTR ERVK 489 526 -52 1 1282 297 273 65 0 chrX 91447358 91447435 -75202861 + ID4_ SINE ID 1 82 -1 1 1282 249 33 0 0 chrX 91447489 91447519 -75202777 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1 1282 833 181 7 21 chrX 91447521 91447662 -75202634 - B1F2 SINE Alu -8 141 3 1 1282 261 0 0 0 chrX 91447717 91447746 -75202550 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1282 726 133 19 0 chrX 91447750 91447855 -75202441 - PB1D9 SINE Alu -13 107 1 1 1282 681 212 9 21 chrX 91448809 91448953 -75201343 - B1_Mur1 SINE Alu -7 142 7 1 1282 322 254 14 14 chrX 91449013 91449085 -75201211 - ID4_ SINE ID 0 83 12 1 1282 261 309 24 31 chrX 91449487 91449614 -75200682 + L1MB5 LINE L1 5927 6052 -122 1 1282 1682 42 0 25 chrX 91450549 91450746 -75199550 - B2_Mm1a SINE B2 0 193 2 1 1282 1251 51 97 6 chrX 91450899 91451049 -75199247 + B2_Mm1t SINE B2 2 163 -30 1 1282 185 0 40 0 chrX 91451049 91451074 -75199222 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 1 1282 1251 51 97 6 chrX 91451074 91451099 -75199197 + B2_Mm1t SINE B2 164 193 0 1 1282 1423 65 16 36 chrX 91451269 91451462 -75198834 + B2_Mm2 SINE B2 3 191 -4 1 1282 271 330 0 21 chrX 91451613 91451709 -75198587 + MER58B DNA MER1_type 198 291 -50 1 1282 268 254 113 0 chrX 91451764 91451835 -75198461 + MER96B DNA hAT 1 79 -338 1 1282 252 324 26 39 chrX 91451846 91451923 -75198373 + ID4 SINE ID 8 83 0 1 1282 698 75 0 31 chrX 91451929 91452025 -75198271 + B2_Mm1t SINE B2 45 137 -56 1 1282 3787 70 7 0 chrX 91452025 91452483 -75197813 + L1_Mus1 LINE L1 6107 6567 0 1 1282 496 224 60 47 chrX 91452589 91452739 -75197557 + ID_B1 SINE B4 66 217 -7 1 1282 825 133 52 0 chrX 91452609 91452744 -75197552 + B1_Mus2 SINE Alu 6 147 0 1 1282 2285 133 204 52 chrX 91452758 91453259 -75197037 - RMER4B LTR ERVK -8 577 1 1 1282 544 187 91 27 chrX 91453473 91453583 -75196713 + PB1D9 SINE Alu 4 120 0 1 1282 689 159 314 35 chrX 91453641 91453810 -75196486 + B3 SINE B2 1 216 0 1 1282 770 183 0 78 chrX 91454046 91454200 -75196096 + B1_Mus1 SINE Alu 1 142 -6 1 1282 450 181 152 0 chrX 91454364 91454469 -75195827 - B3 SINE B2 -95 121 1 1 1282 2188 137 170 63 chrX 91455137 91455607 -75194689 - RMER4B LTR ERVK 0 585 47 1 1282 1105 70 35 0 chrX 91455607 91455749 -75194547 + B1_Mm SINE Alu 1 147 0 1 1282 2188 137 170 63 chrX 91455749 91455802 -75194494 - RMER4B LTR ERVK -539 46 6 1 1282 404 301 35 9 chrX 91455810 91455924 -75194372 + RSINE1 SINE B4 14 130 -35 1 1282 1054 53 76 0 chrX 91455941 91456073 -75194223 + B1_Mus1 SINE Alu 2 143 -5 1 1282 581 205 0 93 chrX 91456179 91456308 -75193988 + B1_Mm SINE Alu 26 142 -5 1 1282 413 263 21 150 chrX 91456495 91456635 -75193661 + B1F1 SINE Alu 17 138 -11 1 1282 207 0 0 0 chrX 91457238 91457261 -75193035 + (C)n Simple_repeat Simple_repeat 1 23 0 1 1282 635 241 141 17 chrX 91457468 91457645 -75192651 - ID_B1 SINE B4 -20 204 6 1 1282 255 287 161 0 chrX 91458858 91458945 -75191351 + PB1D10 SINE Alu 9 109 -8 1 1282 1301 104 27 27 chrX 91458980 91459168 -75191128 + B2_Mm2 SINE B2 1 188 -7 1 1282 207 0 0 0 chrX 91459239 91459262 -75191034 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1282 1313 41 0 0 chrX 91459262 91459409 -75190887 - B1_Mus2 SINE Alu 0 147 1 1 1282 268 167 0 0 chrX 91459457 91459499 -75190797 - B1_Mus1 SINE Alu -100 48 7 1 1282 216 255 0 19 chrX 91459458 91459510 -75190786 - B4A SINE B4 -161 131 81 1 1282 861 138 64 14 chrX 91459623 91459763 -75190533 + B1_Mus1 SINE Alu 2 148 0 1 1282 252 196 0 0 chrX 91460222 91460268 -75190028 + RSINE1 SINE B4 2 47 -118 1 1282 309 260 220 0 chrX 91460326 91460426 -75189870 - B3 SINE B2 -93 123 2 1 1282 240 233 12 99 chrX 91460518 91460599 -75189697 - B4A SINE B4 -216 76 3 1 1282 225 285 153 49 chrX 91460603 91460664 -75189632 + YREP_Mm Unknown Unknown 135 293 -1519 1 1282 416 253 36 0 chrX 91460664 91460747 -75189549 - ID_B1 SINE B4 -34 190 105 1 1282 885 193 29 0 chrX 91460769 91460909 -75189387 - B1_Mur4 SINE Alu -6 144 1 1 1282 293 172 0 0 chrX 91460962 91461020 -75189276 - B3 SINE B2 -3 213 156 1 1282 2568 117 106 39 chrX 91461026 91461462 -75188834 + RMER19B LTR ERVK 1 465 -437 1 1282 451 210 48 39 chrX 91461452 91461556 -75188740 + B1_Mus1 SINE Alu 39 143 -5 1 1282 252 0 0 0 chrX 91461557 91461585 -75188711 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 1 1282 850 278 43 0 chrX 91461787 91461996 -75188300 - ID_B1 SINE B4 -2 222 5 1 1282 426 237 31 10 chrX 91462003 91462101 -75188195 - PB1D7 SINE Alu -1 119 20 1 1282 978 155 7 7 chrX 91462116 91462265 -75188031 - B1_Mur4 SINE Alu -1 149 1 1 1282 443 219 7 31 chrX 91462273 91462386 -75187910 - L1M5 LINE L1 -1447 4699 4585 1 1282 1354 80 29 0 chrX 91462386 91462561 -75187735 + B2_Mm2 SINE B2 2 181 -14 1 1282 399 80 8 30 chrX 91462588 91462654 -75187642 + B2_Mm2 SINE B2 46 115 -83 1 1282 1084 8 0 22 chrX 91462699 91462833 -75187463 - B1_Mus2 SINE Alu 0 147 17 1 1282 1992 60 0 0 chrX 91462835 91463085 -75187211 - MTA_Mm LTR MaLR -146 250 1 1 1282 8971 49 9 58 chrX 91463085 91463271 -75187025 - MTA_Mm-int LTR MaLR 0 1098 922 1 1282 1545 58 10 16 chrX 91463271 91463463 -75186833 + B2_Mm1t SINE B2 2 192 -1 1 1282 8971 49 9 58 chrX 91463463 91463502 -75186794 - MT-int LTR MaLR -177 921 921 1 1282 1216 56 0 14 chrX 91463502 91463647 -75186649 + B1_Mus2 SINE Alu 5 147 0 1 1282 8971 49 9 58 chrX 91463647 91464575 -75185721 - MTA_Mm-int LTR MaLR -177 921 1 1 1282 3356 61 10 2 chrX 91464575 91464968 -75185328 - MTA_Mm LTR MaLR 0 396 1 1 1282 968 154 0 6 chrX 91464983 91465159 -75185137 + CT-rich Low_complexity Low_complexity 3 177 0 1 1282 453 300 38 8 chrX 91465161 91465292 -75185004 - B1F SINE Alu -14 135 1 1 1282 295 113 62 31 chrX 91465439 91465503 -75184793 - L1M4 LINE L1 -1553 4593 4528 1 1282 237 209 14 29 chrX 91465764 91465791 -75184505 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1282 711 168 62 55 chrX 91465791 91465936 -75184360 - B1_Mus2 SINE Alu -1 146 1 1 1282 237 209 14 29 chrX 91465936 91465977 -75184319 + (TTTG)n Simple_repeat Simple_repeat 4 45 0 1 1282 463 263 110 83 chrX 91465979 91466124 -75184172 - RSINE1 SINE B4 0 165 17 1 1282 742 232 80 0 chrX 91466178 91466316 -75183980 + B1_Mur1 SINE Alu 1 149 0 1 1282 471 252 28 9 chrX 91466343 91466451 -75183845 + PB1D7 SINE Alu 3 112 -8 1 1282 539 230 27 54 chrX 91466460 91466607 -75183689 + ID_B1 SINE B4 80 222 -2 1 1282 1607 144 0 20 chrX 91466670 91466924 -75183372 + Lx5 LINE L1 5814 6062 -988 1 1282 2561 150 50 11 chrX 91466938 91467402 -75182894 + RLTR11A2 LTR ERVK 46 527 0 1 1282 1798 204 5 24 chrX 91467420 91467832 -75182464 + Lx5 LINE L1 6034 6437 -613 1 1282 2009 232 11 0 chrX 91467832 91468211 -75182085 + Lx5 LINE L1 6656 7038 -12 1 1282 1324 34 0 0 chrX 91468231 91468378 -75181918 + B1_Mm SINE Alu 1 147 0 1 1282 521 215 131 0 chrX 91468397 91468504 -75181792 + B3A SINE B2 27 147 -51 1 1282 290 67 0 22 chrX 91468504 91468550 -75181746 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1282 243 0 0 0 chrX 91468550 91468576 -75181720 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 1282 938 219 10 58 chrX 91468588 91468796 -75181500 - B3A SINE B2 0 198 1 1 1282 451 196 118 0 chrX 91468814 91468916 -75181380 + B1_Mur1 SINE Alu 36 149 0 1 1282 405 0 0 0 chrX 91468980 91469025 -75181271 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1282 858 73 8 3 chrX 91469026 91469156 -75181140 - B1_Mm SINE Alu -10 139 7 1 1282 306 132 0 0 chrX 91469213 91469266 -75181030 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1282 31 0 0 0 chrX 91469757 91469788 -75180508 + AT_rich Low_complexity Low_complexity 1 31 0 1 1282 261 0 0 0 chrX 91469789 91469818 -75180478 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1282 542 206 68 10 chrX 91469818 91469921 -75180375 - RSINE1 SINE B4 -51 114 6 1 1282 535 198 10 0 chrX 91469931 91470032 -75180264 - ID_B1 SINE B4 -9 215 114 1 1282 207 0 0 0 chrX 91470126 91470149 -75180147 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1282 749 139 87 65 chrX 91470150 91470288 -75180008 - B1_Mur4 SINE Alu -8 142 2 1 1282 744 217 68 4 chrX 91470347 91470543 -75179753 - B3A SINE B2 0 216 2 1 1282 374 239 127 42 chrX 91470563 91470681 -75179615 - ID_B1 SINE B4 -9 215 88 1 1282 301 173 0 0 chrX 91470722 91470774 -75179522 - PB1D7 SINE Alu -28 92 41 1 1282 599 271 56 43 chrX 91470869 91471031 -75179265 - RSINE1 SINE B4 0 165 2 1 1282 233 288 105 26 chrX 91471108 91471222 -75179074 + L2 LINE L2 2459 2581 -838 1 1282 246 326 250 21 chrX 91471227 91471415 -75178881 + L2 LINE L2 2700 2930 -489 1 1282 612 121 63 14 chrX 91471560 91471703 -75178593 - RMER17A2 LTR ERVK -399 507 358 1 1282 642 32 0 31 chrX 91471703 91471799 -75178497 + (GGAGA)n Simple_repeat Simple_repeat 2 94 0 1 1282 401 359 0 10 chrX 91471934 91472038 -75178258 + RSINE1 SINE B4 13 115 -50 1 1282 227 31 31 0 chrX 91472039 91472071 -75178225 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 1 1282 891 122 0 0 chrX 91472081 91472204 -75178092 - B1_Mur2 SINE Alu -6 143 21 1 1282 864 179 0 35 chrX 91472308 91472476 -75177820 + MTC LTR MaLR 54 209 -212 1 1282 1264 54 0 0 chrX 91472476 91472623 -75177673 + B1_Mus2 SINE Alu 1 147 0 1 1282 237 65 0 0 chrX 91472693 91472724 -75177572 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1282 1159 157 108 0 chrX 91472724 91472928 -75177368 + MTC LTR MaLR 196 421 0 1 1282 833 324 104 30 chrX 91472929 91473333 -75176963 + Lx8 LINE L1 6859 7292 -181 1 1282 252 251 0 71 chrX 91473591 91473743 -75176553 + RMER21B LTR ERV1 57 194 -648 1 1282 243 0 0 0 chrX 91474144 91474171 -75176125 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 1282 276 189 107 0 chrX 91474387 91474452 -75175844 + ID4 SINE ID 1 71 -81 1 1282 1365 88 16 0 chrX 91474495 91474677 -75175619 - B2_Mm1t SINE B2 -8 185 1 1 1282 447 291 39 8 chrX 91475082 91475210 -75175086 - RMER10B LTR ERVL 0 398 267 1 1282 234 260 20 0 chrX 91476182 91476232 -75174064 + PB1D7 SINE Alu 4 54 -66 1 1282 383 365 34 20 chrX 91476336 91476484 -75173812 + ID_B1 SINE B4 2 151 -73 1 1282 954 109 0 0 chrX 91476468 91476615 -75173681 + URR1A DNA MER1_type 80 226 0 1 1282 462 246 68 0 chrX 91476620 91476738 -75173558 + ID_B1 SINE B4 97 222 -2 1 1282 406 292 30 104 chrX 91476746 91476880 -75173416 + RSINE1 SINE B4 7 130 -35 1 1282 609 263 0 7 chrX 91477130 91477268 -75173028 - B1_Mur1 SINE Alu 0 149 13 1 1282 225 303 18 132 chrX 91477176 91477290 -75173006 - MT2B LTR ERVL -344 257 157 1 1282 202 116 23 23 chrX 91477552 91477596 -75172700 + (TATATG)n Simple_repeat Simple_repeat 1 44 0 1 1282 401 271 10 50 chrX 91477597 91477698 -75172598 - RSINE1 SINE B4 -2 163 67 1 1282 763 226 101 20 chrX 91477805 91478004 -75172292 + B3 SINE B2 1 215 -1 1 1282 261 118 0 0 chrX 91478028 91478079 -75172217 + (CAAA)n Simple_repeat Simple_repeat 3 53 0 1 1282 581 216 148 21 chrX 91478549 91478691 -75171605 - RSINE1 SINE B4 -3 162 3 1 1282 21 36 0 0 chrX 91480006 91480034 -75170262 + GC_rich Low_complexity Low_complexity 1 28 0 1 1282 31 82 0 0 chrX 91480155 91480228 -75170068 + GC_rich Low_complexity Low_complexity 1 73 0 1 1282 351 0 0 0 chrX 91480947 91480986 -75169310 + (GA)n Simple_repeat Simple_repeat 1 39 0 1 1282 321 258 103 16 chrX 91481205 91481331 -75168965 + MIRc SINE MIR 119 255 -13 1 1282 778 204 61 0 chrX 91482412 91482593 -75167703 + MER45B DNA Tip100 787 978 -62 1 1282 217 343 125 0 chrX 91482817 91482970 -75167326 + MIRb SINE MIR 48 213 -49 1 1282 306 220 0 33 chrX 91482965 91483026 -75167270 - L2a LINE L2 -19 3407 3349 1 1282 280 259 49 24 chrX 91483062 91483146 -75167150 - B1F1 SINE Alu -23 97 3 1 1282 320 222 150 10 chrX 91483162 91483262 -75167034 + PB1 SINE Alu 11 124 -3 1 1282 955 153 0 20 chrX 91483367 91483514 -75166782 - B1_Mur3 SINE Alu -1 148 5 1 1282 371 145 0 14 chrX 91483679 91483749 -75166547 + GA-rich Low_complexity Low_complexity 1 69 0 1 1282 705 216 199 0 chrX 91483866 91484042 -75166254 + B3 SINE B2 1 211 -5 1 1282 340 220 53 32 chrX 91484096 91484190 -75166106 + PB1D9 SINE Alu 23 118 -2 1 1282 713 187 16 0 chrX 91484249 91484372 -75165924 - B1_Mur4 SINE Alu -1 149 25 1 1282 673 248 20 14 chrX 91484461 91484608 -75165688 - RSINE1 SINE B4 0 165 18 1 1282 292 246 27 14 chrX 91484653 91484727 -75165569 + ID SINE ID 2 76 -148 1 1282 248 284 0 12 chrX 91485806 91485888 -75164408 + (TG)n Simple_repeat Simple_repeat 2 82 0 1 1282 391 251 71 114 chrX 91485927 91486141 -75164155 - Charlie1 DNA MER1_type -31 2750 2534 1 1282 513 208 131 9 chrX 91486141 91486248 -75164048 + PB1D7 SINE Alu 1 120 0 1 1282 391 251 71 114 chrX 91486248 91486357 -75163939 - Charlie1 DNA MER1_type -248 2533 2441 1 1282 239 333 0 13 chrX 91486389 91486465 -75163831 - ID4 SINE ID -7 76 2 1 1282 228 67 0 0 chrX 91486617 91486647 -75163649 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1282 21 36 0 0 chrX 91487175 91487203 -75163093 + AT_rich Low_complexity Low_complexity 1 28 0 1 1282 216 0 0 0 chrX 91487439 91487463 -75162833 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1282 1353 109 11 16 chrX 91487536 91487723 -75162573 - B2_Mm2 SINE B2 -9 186 1 1 1282 186 311 0 75 chrX 91487788 91487868 -75162428 + MIR SINE MIR 72 145 -63 1 1282 1114 48 0 104 chrX 91487971 91488134 -75162162 - B1_Mus2 SINE Alu 0 147 2 1 160 676 285 15 35 chrX 91488225 91488425 -75161871 - MIR SINE MIR -35 227 32 1 1283 777 219 7 0 chrX 91488693 91488839 -75161457 - B1_Mus1 SINE Alu -1 147 1 1 1283 375 121 0 0 chrX 91488944 91489002 -75161294 + (TC)n Simple_repeat Simple_repeat 1 58 0 1 1283 488 292 0 9 chrX 91489590 91489704 -75160592 - PB1D7 SINE Alu -5 115 3 1 1283 998 171 83 29 chrX 91489924 91490129 -75160167 + B3 SINE B2 1 216 0 1 1283 258 303 76 0 chrX 91490219 91490285 -75160011 - ID4 SINE ID -1 82 12 1 1283 249 244 127 24 chrX 91490491 91490617 -75159679 + Tigger14a DNA MER2_type 143 281 -43 1 1283 790 165 43 14 chrX 91490737 91490878 -75159418 + B1_Mur2 SINE Alu 5 149 0 1 1283 410 246 65 0 chrX 91490924 91491025 -75159271 - B1F SINE Alu -27 122 15 1 1283 276 123 110 110 chrX 91490960 91491033 -75159263 - MT2B2 LTR ERVL -344 240 168 1 1283 1800 21 0 0 chrX 91491179 91491370 -75158926 - B2_Mm1t SINE B2 -1 192 2 1 1283 180 0 0 0 chrX 91491374 91491394 -75158902 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1283 1248 48 14 0 chrX 91491394 91491539 -75158757 - B1_Mm SINE Alu 0 147 1 1 1283 803 138 16 8 chrX 91491543 91491667 -75158629 + B1_Mus1 SINE Alu 18 142 -6 1 1283 25 0 0 0 chrX 91491671 91491696 -75158600 + AT_rich Low_complexity Low_complexity 1 25 0 1 1283 1736 36 0 0 chrX 91491722 91491915 -75158381 + B2_Mm1t SINE B2 1 193 0 1 1283 475 198 42 0 chrX 91491954 91492050 -75158246 + B1F2 SINE Alu 48 147 -2 1 1283 528 264 6 83 chrX 91492206 91492363 -75157933 + B1F SINE Alu 5 149 0 1 1283 21 57 0 0 chrX 91493000 91493035 -75157261 + AT_rich Low_complexity Low_complexity 1 35 0 1 1283 2928 88 23 3 chrX 91493039 91493424 -75156872 - L1_Mus4 LINE L1 0 6636 6244 1 1283 888 164 94 6 chrX 91493441 91493600 -75156696 + MTC LTR MaLR 196 368 -53 1 1283 946 80 232 0 chrX 91493625 91493776 -75156520 + B2_Mm2 SINE B2 1 186 -9 1 1283 787 133 367 0 chrX 91493791 91493941 -75156355 - B3 SINE B2 -10 206 2 1 1283 467 233 130 24 chrX 91493949 91494072 -75156224 - ID_B1 SINE B4 -7 217 82 1 1283 352 223 62 31 chrX 91494695 91494792 -75155504 + PB1D7 SINE Alu 5 104 -16 1 1283 252 282 105 12 chrX 91495150 91495236 -75155060 + B1F SINE Alu 3 96 -53 1 1283 1012 66 0 49 chrX 91495530 91495673 -75154623 - L1_Mus1 LINE L1 0 6567 6432 1 1283 316 254 60 0 chrX 91496131 91496198 -75154098 - ID4_ SINE ID -1 82 12 1 1283 661 211 16 8 chrX 91496208 91496332 -75153964 - B1_Mur1 SINE Alu -20 129 5 1 1283 1402 111 11 0 chrX 91496490 91496679 -75153617 + B2_Mm1t SINE B2 2 192 -1 1 1283 487 209 45 0 chrX 91496871 91496981 -75153315 - PB1D9 SINE Alu -1 119 5 1 1283 346 230 0 121 chrX 91497002 91497101 -75153195 - B1F SINE Alu -3 146 60 1 1283 239 215 28 84 chrX 91497050 91497121 -75153175 - MT2B LTR ERVL -336 265 199 1 1283 381 276 23 11 chrX 91497171 91497259 -75153037 - PB1 SINE Alu -33 94 6 1 1283 25 65 0 0 chrX 91499507 91499553 -75150743 + AT_rich Low_complexity Low_complexity 1 46 0 1 1283 227 276 189 72 chrX 91500177 91500357 -75149939 + MT2B LTR ERVL 58 258 -343 1 1283 423 186 259 56 chrX 91500292 91500400 -75149896 + B1_Mur3 SINE Alu 13 142 -7 2 1283 367 300 56 21 chrX 91500494 91500637 -75149659 - B1F SINE Alu 0 149 2 3 1283 328 299 14 14 chrX 91500826 91500965 -75149331 - L1MC4 LINE L1 -140 7902 7764 4 1283 198 0 0 0 chrX 91501524 91501546 -75148750 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 5 1283 1594 58 16 0 chrX 91501793 91501983 -75148313 + B2_Mm1t SINE B2 1 193 0 6 1283 736 124 0 83 chrX 91502127 91502259 -75148037 + B1_Mus1 SINE Alu 4 124 -24 7 1283 217 27 53 26 chrX 91502259 91502297 -75147999 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 1283 687 183 277 12 chrX 91502495 91502661 -75147635 + B3 SINE B2 1 210 -6 9 1283 231 257 186 0 chrX 91502709 91502779 -75147517 - ID4_ SINE ID 0 83 1 1 1283 253 159 79 0 chrX 91502779 91502839 -75147457 + MER33 DNA MER1_type 147 211 -113 1 1283 1251 48 0 7 chrX 91503634 91503782 -75146514 - B1_Mus2 SINE Alu 0 147 1 1 1283 249 257 81 54 chrX 91504042 91504116 -75146180 - ID4_ SINE ID -3 80 5 1 1283 255 60 0 57 chrX 91504216 91504269 -75146027 - L1Md_F2 LINE L1 0 6582 6533 1 1283 621 281 20 0 chrX 91504462 91504608 -75145688 - B1F SINE Alu 0 149 1 1 1283 884 59 8 0 chrX 91504631 91504750 -75145546 + (TTCTC)n Simple_repeat Simple_repeat 1 120 0 1 1283 786 211 0 7 chrX 91504750 91504889 -75145407 - B1_Mus2 SINE Alu -8 139 1 1 1283 593 259 17 0 chrX 91504924 91505040 -75145256 + RSINE1 SINE B4 48 165 0 1 1283 593 227 0 0 chrX 91505176 91505286 -75145010 + PB1D7 SINE Alu 11 120 0 1 1283 752 222 97 0 chrX 91505958 91506102 -75144194 + RSINE1 SINE B4 4 161 -4 2 1283 312 368 17 25 chrX 91506215 91506335 -75143961 - PB1D7 SINE Alu -1 119 1 2 1283 693 158 173 0 chrX 91506356 91506483 -75143813 + B1_Mur2 SINE Alu 1 149 0 2 1283 803 270 18 166 chrX 91506526 91506864 -75143432 + B4 SINE B4 5 292 0 2 1283 1429 73 0 6 chrX 91507137 91507160 -75143136 - B2_Mm1a SINE B2 -14 179 158 2 1283 1772 26 0 0 chrX 91507160 91507352 -75142944 - B2_Mm1t SINE B2 0 193 2 2 1283 1429 73 0 6 chrX 91507352 91507507 -75142789 - B2_Mm1a SINE B2 -36 157 3 2 1283 896 251 109 26 chrX 91507822 91508088 -75142208 - B4A SINE B4 -3 289 2 2 1283 565 193 46 0 chrX 91508620 91508729 -75141567 + PB1D9 SINE Alu 2 115 -5 2 1283 932 147 48 20 chrX 91509019 91509165 -75141131 - B1_Mur4 SINE Alu 0 150 1 2 1283 180 97 0 0 chrX 91509259 91509290 -75141006 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2 1283 434 112 62 73 chrX 91509310 91509406 -75140890 - Lx3_Mus LINE L1 0 7009 6915 3 1283 288 0 0 0 chrX 91509470 91509502 -75140794 + (TCTA)n Simple_repeat Simple_repeat 3 34 0 3 1283 306 125 0 0 chrX 91509509 91509557 -75140739 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1283 848 121 153 62 chrX 91509662 91509838 -75140458 + B2_Mm2 SINE B2 2 193 -2 3 1283 298 304 167 0 chrX 91509999 91510137 -75140159 + MER2B DNA MER2_type 173 333 -3 3 1283 765 86 31 3 chrX 91510264 91510396 -75139900 - B1_Mur3 SINE Alu 0 149 3 3 1283 340 192 78 96 chrX 91510298 91510413 -75139883 - MT2B LTR ERVL -337 264 152 3 1283 1229 74 0 0 chrX 91510624 91510772 -75139524 + B1_Mus1 SINE Alu 1 148 0 3 1283 555 221 172 0 chrX 91510802 91510924 -75139372 + B1F1 SINE Alu 1 143 -6 3 1283 244 286 139 28 chrX 91512669 91512777 -75137519 - L3 LINE CR1 -39 4450 4331 3 1283 506 186 228 9 chrX 91513126 91513240 -75137056 - B1_Mur1 SINE Alu 0 149 11 4 1283 215 155 200 53 chrX 91513689 91513764 -75136532 - L3 LINE CR1 -2223 2266 2181 4 1283 292 253 253 0 chrX 91514476 91514563 -75135733 - B1F1 SINE Alu -40 109 1 4 1283 418 235 12 24 chrX 91514590 91514673 -75135623 - ID4 SINE ID 0 83 2 4 1283 180 0 0 0 chrX 91515169 91515189 -75135107 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 4 1283 1175 64 32 0 chrX 91515189 91515346 -75134950 - B2_Mm2 SINE B2 -33 162 1 4 1283 213 81 54 0 chrX 91515422 91515459 -75134837 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 4 1283 591 283 22 7 chrX 91515459 91515598 -75134698 - ID_B1 SINE B4 0 224 84 4 1283 661 164 8 25 chrX 91515646 91515765 -75134531 - B1_Mur3 SINE Alu -2 147 31 4 1283 247 364 68 23 chrX 91515903 91516035 -75134261 + MIRb SINE MIR 16 153 -115 4 1283 291 252 108 0 chrX 91516149 91516260 -75134036 - Charlie4a DNA MER1_type -34 474 352 5 1283 271 300 12 12 chrX 91516599 91516680 -75133616 - ID4_ SINE ID -1 82 2 5 1283 485 99 96 24 chrX 91517092 91517175 -75133121 - B1_Mur4 SINE Alu 0 150 62 5 1283 336 77 0 0 chrX 91520064 91520116 -75130180 + (T)n Simple_repeat Simple_repeat 1 52 0 5 1283 21 36 0 0 chrX 91520802 91520830 -75129466 + AT_rich Low_complexity Low_complexity 1 28 0 5 1283 335 115 33 0 chrX 91522692 91522753 -75127543 + (TTTTC)n Simple_repeat Simple_repeat 3 65 0 5 1283 22 35 0 0 chrX 91523034 91523063 -75127233 + AT_rich Low_complexity Low_complexity 1 29 0 5 1283 510 108 0 0 chrX 91523436 91523519 -75126777 + (CA)n Simple_repeat Simple_repeat 1 83 0 5 1283 1059 227 142 25 chrX 91523737 91524062 -75126234 + ORR1D2 LTR MaLR 1 363 -7 5 1283 531 180 17 59 chrX 91524462 91524580 -75125716 + B1_Mur3 SINE Alu 37 149 0 5 1283 193 273 45 0 chrX 91524609 91524675 -75125621 + L2 LINE L2 2383 2451 -968 6 1283 1033 214 28 9 chrX 91524687 91524899 -75125397 - ORR1D2 LTR MaLR 0 370 155 6 1283 688 157 37 15 chrX 91524912 91525048 -75125248 - Lx LINE L1 -1 6653 6515 6 1283 12402 63 3 3 chrX 91525048 91526694 -75123602 - MusHAL1 LINE L1 -806 1906 261 6 1283 444 270 17 0 chrX 91526788 91526903 -75123393 - PB1D10 SINE Alu 0 117 1 6 1283 311 210 113 0 chrX 91527140 91527202 -75123094 - ID2 SINE ID -14 69 1 6 1283 3446 45 0 15 chrX 91527385 91527789 -75122507 + L1Md_F2 LINE L1 6185 6582 0 6 1283 1279 34 14 0 chrX 91528133 91528279 -75122017 - B1_Mus1 SINE Alu 0 148 1 6 1283 628 214 257 0 chrX 91528559 91528722 -75121574 + B3 SINE B2 1 205 -11 6 1283 264 41 0 75 chrX 91529050 91529103 -75121193 + (TCCC)n Simple_repeat Simple_repeat 2 50 0 6 1283 331 314 33 0 chrX 91529107 91529228 -75121068 - L1ME4a LINE L1 -232 5892 5768 7 1283 498 287 32 77 chrX 91529267 91529422 -75120874 + RSINE1 SINE B4 1 148 -17 7 1283 335 312 0 12 chrX 91529548 91529629 -75120667 - ID4 SINE ID -3 80 1 7 1283 216 268 28 14 chrX 91529813 91529854 -75120442 + polypyrimidine Low_complexity Low_complexity 36 77 0 7 1283 461 200 106 39 chrX 91529854 91529958 -75120338 - PB1D9 SINE Alu -8 112 2 7 1283 216 268 28 14 chrX 91529958 91529988 -75120308 + polypyrimidine Low_complexity Low_complexity 6 35 0 7 1283 523 298 60 0 chrX 91529988 91530139 -75120157 - ID_B1 SINE B4 0 224 65 7 1283 722 198 281 0 chrX 91530150 91530317 -75119979 - B3 SINE B2 0 216 3 7 1283 821 266 89 16 chrX 91530425 91530616 -75119680 - B3 SINE B2 -11 205 1 7 1283 639 332 49 42 chrX 91530931 91531217 -75119079 - B4A SINE B4 -1 291 4 7 1283 1499 156 74 4 chrX 91531241 91531498 -75118798 - ORR1A3 LTR MaLR -51 275 1 8 1283 280 348 109 45 chrX 91531502 91531613 -75118683 - MER68 LTR ERVL -328 235 103 8 1283 1779 21 0 0 chrX 91531613 91531803 -75118493 - B2_Mm1a SINE B2 -2 191 2 8 1283 280 348 109 45 chrX 91531803 91531911 -75118385 - MER68 LTR ERVL -461 102 3 8 1283 2828 60 0 17 chrX 91531970 91532324 -75117972 - L1Md_F2 LINE L1 0 6582 6235 8 1283 305 284 143 29 chrX 91532398 91532503 -75117793 + PB1 SINE Alu 9 125 -2 8 1283 247 291 18 0 chrX 91532504 91532559 -75117737 + ID2 SINE ID 2 57 -26 8 1283 496 327 90 19 chrX 91533294 91533550 -75116746 + B4A SINE B4 1 274 -18 8 1283 469 139 76 0 chrX 91533656 91533735 -75116561 + B1_Mur3 SINE Alu 58 142 -7 8 1283 270 0 0 0 chrX 91533741 91533771 -75116525 + (CAAT)n Simple_repeat Simple_repeat 2 31 0 8 1283 254 299 93 36 chrX 91533823 91533962 -75116334 - LTR16E1 LTR ERVL -200 338 192 8 1283 566 259 36 15 chrX 91534162 91534299 -75115997 + B1_Mur3 SINE Alu 1 140 -9 9 1283 344 22 0 22 chrX 91534332 91534378 -75115918 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 9 1283 965 91 158 25 chrX 91534384 91534542 -75115754 - B2_Mm2 SINE B2 -14 181 3 9 1283 335 125 0 123 chrX 91534583 91534656 -75115640 - B1_Mur3 SINE Alu 0 149 86 9 1283 916 76 53 0 chrX 91534853 91534985 -75115311 - Lx2 LINE L1 0 6997 6859 9 1283 249 98 0 0 chrX 91534995 91535036 -75115260 + (T)n Simple_repeat Simple_repeat 1 41 0 9 1283 857 158 7 7 chrX 91535036 91535176 -75115120 - B1_Mur1 SINE Alu 0 149 10 9 1283 539 220 36 9 chrX 91535222 91535332 -75114964 + PB1D7 SINE Alu 1 113 -7 9 1283 274 271 7 126 chrX 91535371 91535393 -75114903 + MT2B LTR ERVL 146 151 -450 9 1283 604 214 17 17 chrX 91535393 91535512 -75114784 + B1_Mur1 SINE Alu 2 120 -29 9 1283 7497 117 11 4 chrX 91535519 91536582 -75113714 + Lx2 LINE L1 5926 6996 -1 1 1283 1082 182 88 5 chrX 91537267 91537460 -75112836 - B3 SINE B2 -6 210 2 1 1283 449 204 48 58 chrX 91537806 91537910 -75112386 + PB1D9 SINE Alu 2 104 -16 1 1283 588 204 174 7 chrX 91537924 91538062 -75112234 + ID_B1 SINE B4 9 169 -55 1 1283 826 49 0 0 chrX 91538216 91538318 -75111978 - B1_Mus2 SINE Alu 0 147 46 1 1283 244 288 108 32 chrX 91538260 91538418 -75111878 - RLTR25A LTR ERVK -521 582 413 1 1283 226 271 51 20 chrX 91538648 91538746 -75111550 + MIRb SINE MIR 125 225 -43 1 1283 555 16 0 0 chrX 91539077 91539141 -75111155 + (GA)n Simple_repeat Simple_repeat 1 64 0 1 1283 409 191 245 9 chrX 91539947 91540053 -75110243 + RSINE1 SINE B4 3 133 -32 1 1283 323 231 0 0 chrX 91540089 91540154 -75110142 - RSINE1 SINE B4 -36 129 65 1 1283 1304 27 7 0 chrX 91540527 91540674 -75109622 + B1_Mus1 SINE Alu 1 148 0 1 1283 1206 94 6 0 chrX 91541113 91541272 -75109024 + B2_Mm1t SINE B2 1 160 -33 1 1283 261 83 0 0 chrX 91541272 91541308 -75108988 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 1 1283 1206 94 6 0 chrX 91541308 91541319 -75108977 + B2_Mm1t SINE B2 161 171 -22 1 1283 394 256 0 11 chrX 91541580 91541671 -75108625 + PB1D10 SINE Alu 5 94 -23 1 1283 258 313 47 35 chrX 91541715 91541801 -75108495 + ID_B1 SINE B4 4 90 -134 1 1283 496 53 13 0 chrX 91542202 91542277 -75108019 - RLTR9B LTR ERVK 0 420 345 1 1283 860 81 8 16 chrX 91542272 91542398 -75107898 - RLTR9B LTR ERVK -312 125 1 1 1283 2816 53 25 0 chrX 91542489 91542850 -75107446 + MTB LTR MaLR 19 388 -8 1 1283 6425 124 78 52 chrX 91542853 91543244 -75107052 + MTB-int LTR MaLR 2 385 -873 1 1283 5570 39 0 0 chrX 91543244 91543864 -75106432 + L1Md_F2 LINE L1 5955 6574 -8 1 1283 6425 124 78 52 chrX 91543864 91544567 -75105729 + MTB-int LTR MaLR 386 1100 -158 1 1283 1194 55 7 14 chrX 91544567 91544715 -75105581 - B1_Mus1 SINE Alu 0 148 2 1 1283 6425 124 78 52 chrX 91544715 91544844 -75105452 + MTB-int LTR MaLR 1101 1258 0 1 1283 3279 61 20 2 chrX 91544844 91545237 -75105059 + MTB LTR MaLR 1 400 0 1 1283 6562 163 40 35 chrX 91545520 91546822 -75103474 + Lx2B LINE L1 5669 6977 -23 1 1283 1848 170 9 132 chrX 91546843 91547056 -75103240 + RMER1C Other Other 944 1119 -223 1 1283 1327 34 0 0 chrX 91547056 91547203 -75103093 - B1_Mm SINE Alu 0 147 1 1 1283 1848 170 9 132 chrX 91547203 91547444 -75102852 + RMER1C Other Other 1120 1342 0 1 1283 277 210 129 0 chrX 91547872 91547934 -75102362 + ID4_ SINE ID 11 80 -3 1 1283 269 306 0 0 chrX 91549127 91549189 -75101107 + MLT1J LTR MaLR 110 171 -341 1 1283 1317 217 112 16 chrX 91549214 91549651 -75100645 - Lx3C LINE L1 -89 6911 6147 1 1283 2184 230 59 149 chrX 91549661 91549983 -75100313 - RMER17B LTR ERVK -4 904 641 1 1283 6007 32 10 6 chrX 91549983 91550667 -75099629 + L1Md_F3 LINE L1 5898 6584 0 1 1283 2184 222 80 101 chrX 91550667 91551374 -75098922 - RMER17B LTR ERVK -260 698 1 1 1283 1634 194 7 0 chrX 91551387 91551681 -75098615 - Lx4B LINE L1 -573 6485 6190 1 1283 1721 188 38 26 chrX 91551683 91552444 -75097852 - L1_Mur3 LINE L1 -4403 1474 646 1 1283 330 383 8 17 chrX 91552553 91552670 -75097626 - RSINE1 SINE B4 0 165 50 1 1283 241 254 90 119 chrX 91552799 91552827 -75097469 - B2_Mm2 SINE B2 0 195 172 1 1283 1389 179 0 0 chrX 91552827 91553034 -75097262 + B3 SINE B2 1 207 -9 1 1283 613 295 49 37 chrX 91553044 91553206 -75097090 - RSINE1 SINE B4 0 165 2 1 1283 484 353 86 67 chrX 91553333 91553704 -75096592 + LTR16A LTR ERVL 74 451 0 1 1283 2157 159 54 91 chrX 91553748 91554157 -75096139 - ORR1B1 LTR MaLR 0 394 1 1 1283 189 0 0 0 chrX 91554272 91554293 -75096003 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1 1283 431 143 169 0 chrX 91554336 91554413 -75095883 - B3 SINE B2 -111 105 16 1 1283 940 223 28 42 chrX 91554520 91554735 -75095561 + B3 SINE B2 4 215 -1 1 1283 702 227 11 78 chrX 91555201 91555382 -75094914 - RSINE1 SINE B4 0 165 1 1 1283 716 235 6 27 chrX 91555384 91555536 -75094760 - ID_B1 SINE B4 0 224 80 1 1283 352 275 35 52 chrX 91556011 91556126 -75094170 + ID_B1 SINE B4 108 220 -4 1 1283 795 264 142 25 chrX 91556228 91556551 -75093745 + L1MA6 LINE L1 5546 5906 -394 1 1283 271 260 39 67 chrX 91556551 91556674 -75093622 + B3A SINE B2 75 215 -1 1 1283 323 282 51 8 chrX 91556771 91556889 -75093407 + L1MEd LINE L1 1009 1131 -5005 1 1283 489 301 65 7 chrX 91556981 91557135 -75093161 - RSINE1 SINE B4 0 165 3 1 1283 285 277 52 35 chrX 91558656 91558772 -75091524 + L1MEd LINE L1 1432 1549 -4693 1 1283 450 0 0 0 chrX 91558825 91558875 -75091421 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1283 439 286 0 0 chrX 91558889 91558994 -75091302 - B4A SINE B4 -13 279 175 1 1283 531 291 60 41 chrX 91559183 91559548 -75090748 + L1MEd LINE L1 4133 4504 -1642 1 1283 253 338 102 63 chrX 91559590 91559659 -75090637 + MLT1F2 LTR MaLR 2 63 -497 1 1283 907 69 0 0 chrX 91559659 91559789 -75090507 - L1Md_A LINE L1 0 6582 6453 1 1283 253 338 102 63 chrX 91559789 91560022 -75090274 + MLT1F2 LTR MaLR 64 316 -244 1 1283 857 228 5 50 chrX 91560051 91560250 -75090046 - B3 SINE B2 0 216 27 1 1283 301 83 0 0 chrX 91560257 91560305 -75089991 - L1_Mus2 LINE L1 0 6566 6519 1 1283 508 203 112 8 chrX 91560355 91560489 -75089807 + MTD LTR MaLR 3 150 -269 1 1283 579 144 0 0 chrX 91560489 91560614 -75089682 + (TG)n Simple_repeat Simple_repeat 1 125 0 1 1283 1013 152 14 47 chrX 91560656 91560870 -75089426 + MTD LTR MaLR 211 417 -2 1 1283 494 222 95 15 chrX 91560889 91561026 -75089270 - B3A SINE B2 -32 166 19 1 1283 507 288 30 24 chrX 91561086 91561250 -75089046 + MLT1F2 LTR MaLR 388 552 -8 1 1283 626 257 29 19 chrX 91561310 91561516 -75088780 - L1M5 LINE L1 -1678 4468 4261 1 1283 24 32 0 0 chrX 91561650 91561681 -75088615 + AT_rich Low_complexity Low_complexity 1 31 0 1 1283 549 281 25 12 chrX 91561699 91561861 -75088435 - RSINE1 SINE B4 0 165 2 1 1283 554 125 168 9 chrX 91562087 91562200 -75088096 - B1_Mus1 SINE Alu -16 132 2 1 1283 259 318 0 0 chrX 91562268 91562331 -75087965 - RSINE1 SINE B4 0 165 103 1 1283 1158 264 36 12 chrX 91563854 91564191 -75086105 - MT2A LTR ERVL -179 354 10 1 1283 327 179 179 0 chrX 91565016 91565094 -75085202 + B3A SINE B2 2 93 -105 1 1283 351 0 0 0 chrX 91565110 91565149 -75085147 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1283 387 0 0 0 chrX 91565149 91565191 -75085105 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 1283 290 85 43 0 chrX 91565276 91565323 -75084973 - PB1D7 SINE Alu -62 58 10 1 1283 657 238 20 13 chrX 91565402 91565551 -75084745 + ID_B1 SINE B4 75 224 0 1 1283 563 78 60 0 chrX 91565962 91566078 -75084218 + (TA)n Simple_repeat Simple_repeat 2 124 0 1 1283 356 200 0 28 chrX 91566084 91566156 -75084140 - ID4 SINE ID -11 72 3 1 1283 280 253 121 0 chrX 91566320 91566411 -75083885 - L1MD2 LINE L1 -52 6307 6206 1 1283 673 234 0 20 chrX 91566479 91566627 -75083669 - ID_B1 SINE B4 -2 222 78 1 1283 1761 295 66 18 chrX 91566628 91567297 -75082999 - L1MD2 LINE L1 -185 6174 5474 1 1283 450 273 97 97 chrX 91567318 91567345 -75082951 - B2_Mm2 SINE B2 0 195 163 1 1283 432 118 0 0 chrX 91567345 91567413 -75082883 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 1283 766 231 12 36 chrX 91567413 91567580 -75082716 - B3A SINE B2 -33 162 1 1 1283 375 245 10 0 chrX 91567586 91567688 -75082608 - Lx7 LINE L1 -16 7680 7578 1 1283 2563 232 63 20 chrX 91567746 91568385 -75081911 - Lx7 LINE L1 -279 7417 6752 1 1283 1676 228 86 29 chrX 91568385 91568841 -75081455 - Lx7 LINE L1 -1291 6405 5924 1 1283 29 0 0 0 chrX 91568867 91568896 -75081400 + AT_rich Low_complexity Low_complexity 1 29 0 1 1283 216 286 14 14 chrX 91568919 91568990 -75081306 + CT-rich Low_complexity Low_complexity 3 73 0 1 1283 2189 105 101 3 chrX 91569022 91569367 -75080929 - RLTR14 LTR ERV1 -1 381 3 1 1283 1384 278 90 59 chrX 91569387 91569602 -75080694 - L1MD2 LINE L1 -899 5247 5027 1 1283 816 89 146 0 chrX 91569602 91569725 -75080571 + B1_Mm SINE Alu 2 142 -5 1 1283 1384 278 90 59 chrX 91569725 91570106 -75080190 - L1MD2 LINE L1 -1120 5026 4639 1 1283 2388 98 6 23 chrX 91570106 91570460 -75079836 + Lx3A LINE L1 6627 6974 -7 1 1283 1384 278 90 59 chrX 91570460 91570677 -75079619 - L1MD2 LINE L1 -1508 4638 4408 1 1283 541 126 0 11 chrX 91570688 91570776 -75079520 - B1_Mur1 SINE Alu -7 142 56 1 1283 644 206 119 11 chrX 91570933 91571110 -75079186 - B3 SINE B2 -7 209 14 1 1283 397 254 30 24 chrX 91571200 91571331 -75078965 - L1M2 LINE L1 -2440 3703 3577 1 1283 198 0 0 0 chrX 91571517 91571539 -75078757 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1283 342 319 111 46 chrX 91571768 91571985 -75078311 - LTR16C LTR ERVL -93 396 166 1 1283 232 270 34 34 chrX 91572258 91572377 -75077919 + PB1 SINE Alu 2 120 -7 1 1283 458 271 34 14 chrX 91573369 91573515 -75076781 - B1F1 SINE Alu 0 149 1 1 1283 304 312 126 110 chrX 91573567 91573884 -75076412 + ORR1E LTR MaLR 38 359 0 1 1283 798 149 0 0 chrX 91574100 91574234 -75076062 + B1_Mur4 SINE Alu 7 140 -10 1 1283 856 192 80 15 chrX 91574313 91574514 -75075782 + B3 SINE B2 2 215 -1 1 1283 759 85 149 37 chrX 91574514 91574647 -75075649 + B1_Mur4 SINE Alu 1 149 -1 1 1283 201 174 22 0 chrX 91574648 91574694 -75075602 + A-rich Low_complexity Low_complexity 4 50 0 1 1283 3833 75 18 4 chrX 91574695 91575207 -75075089 + L1Md_F2 LINE L1 5068 5586 -297 1 1283 8192 44 11 0 chrX 91575207 91576191 -75074105 + L1Md_F2 LINE L1 5587 6581 -1 1 1283 231 114 0 0 chrX 91578107 91578142 -75072154 + (GGA)n Simple_repeat Simple_repeat 3 37 0 1 1283 508 244 24 0 chrX 91578182 91578305 -75071991 + B3 SINE B2 87 212 -4 1 1283 753 144 13 103 chrX 91578315 91578470 -75071826 + B1_Mus2 SINE Alu 1 141 -6 1 1283 878 238 29 19 chrX 91578987 91579193 -75071103 - B3 SINE B2 0 216 9 1 1283 572 335 116 14 chrX 91579328 91579752 -75070544 - HAL1 LINE L1 -633 1874 1408 1 1283 435 274 28 19 chrX 91579771 91579879 -75070417 - PB1D7 SINE Alu -2 118 10 1 1283 502 285 91 15 chrX 91579989 91580121 -75070175 - RSINE1 SINE B4 -19 146 5 1 1283 348 77 0 0 chrX 91580142 91580194 -75070102 + (TCC)n Simple_repeat Simple_repeat 3 54 0 1 1283 844 151 27 14 chrX 91580199 91580347 -75069949 - B1_Mur4 SINE Alu 0 150 1 1 1283 1997 73 73 0 chrX 91580701 91581001 -75069295 - ORR1A2 LTR MaLR -5 322 1 1 1283 454 337 100 8 chrX 91581016 91581267 -75069029 - HAL1 LINE L1 -1801 706 433 1 1283 416 243 9 18 chrX 91581372 91581481 -75068815 + PB1D10 SINE Alu 1 108 -9 2 1283 201 211 0 0 chrX 91581488 91581545 -75068751 + (CAA)n Simple_repeat Simple_repeat 2 58 0 2 1283 222 37 0 0 chrX 91581552 91581579 -75068717 + (CAAAG)n Simple_repeat Simple_repeat 1 27 0 2 1283 326 123 18 0 chrX 91581726 91581783 -75068513 + (TCC)n Simple_repeat Simple_repeat 3 60 0 2 1283 292 245 68 102 chrX 91581815 91581904 -75068392 + B1F1 SINE Alu 23 109 -40 2 1283 2685 44 22 0 chrX 91581904 91582224 -75068072 + ORR1A2 LTR MaLR 1 327 0 2 1283 292 245 68 102 chrX 91582224 91582252 -75068044 + B1F1 SINE Alu 110 136 -13 2 1283 696 212 29 0 chrX 91582352 91582489 -75067807 - B1_Mur2 SINE Alu -4 145 5 2 1283 186 43 0 0 chrX 91582630 91582653 -75067643 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1283 453 285 98 23 chrX 91582655 91582788 -75067508 + RSINE1 SINE B4 1 143 -22 2 1283 369 0 0 0 chrX 91582796 91582837 -75067459 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1283 414 0 0 0 chrX 91582837 91582882 -75067414 + (GA)n Simple_repeat Simple_repeat 2 47 0 2 1283 955 228 89 34 chrX 91582941 91583293 -75067003 + Lx4B LINE L1 5475 5822 -367 2 1283 1088 217 39 0 chrX 91583296 91583526 -75066770 + RLTR33 LTR ERVK 355 593 -85 2 1283 4450 117 15 13 chrX 91584235 91584911 -75065385 + Lx LINE L1 5978 6654 0 2 1283 603 133 0 0 chrX 91585560 91585688 -75064608 + (TCTG)n Simple_repeat Simple_repeat 1 128 0 2 1283 442 271 49 49 chrX 91585688 91585851 -75064445 - RSINE1 SINE B4 0 165 3 2 1283 398 225 44 11 chrX 91585975 91586065 -75064231 + PB1 SINE Alu 26 118 -9 2 1283 929 233 24 0 chrX 91586288 91586498 -75063798 - B3 SINE B2 0 216 2 2 1283 254 234 0 0 chrX 91586519 91586566 -75063730 - PB1D10 SINE Alu -8 109 63 2 1283 653 158 25 42 chrX 91586670 91586789 -75063507 + PB1D9 SINE Alu 1 117 -3 2 1283 300 53 0 0 chrX 91586807 91586845 -75063451 + (ATG)n Simple_repeat Simple_repeat 2 39 0 2 1283 363 118 0 8 chrX 91587364 91587432 -75062864 - PB1D9 SINE Alu -5 115 51 2 1283 1472 99 27 5 chrX 91587438 91587660 -75062636 - Lx2 LINE L1 0 6997 6771 2 1283 1464 80 0 5 chrX 91587660 91587849 -75062447 - Lx2 LINE L1 -359 6638 6451 2 1283 724 206 14 7 chrX 91587930 91588072 -75062224 - B1_Mur4 SINE Alu -7 143 1 2 1283 383 267 0 0 chrX 91588078 91588168 -75062128 - B4A SINE B4 -200 92 3 2 1283 980 293 130 19 chrX 91588227 91588641 -75061655 + LTR16C LTR ERVL 27 486 -3 2 1283 1215 29 0 0 chrX 91588955 91589094 -75061202 + B1_Mm SINE Alu 1 139 -8 2 1283 414 0 0 0 chrX 91589094 91589140 -75061156 + (CTAA)n Simple_repeat Simple_repeat 3 48 0 2 1283 282 290 9 36 chrX 91589912 91590023 -75060273 + Tigger9a DNA Tigger 579 686 -46 2 1283 1695 303 77 32 chrX 91590794 91591146 -75059150 + Tigger6a DNA MER2_type 16 378 -705 2 1283 834 246 10 49 chrX 91591146 91591351 -75058945 + B3A SINE B2 1 197 -1 2 1283 1695 303 77 32 chrX 91591351 91591755 -75058541 + Tigger6a DNA MER2_type 379 806 -277 2 1283 221 250 0 0 chrX 91591770 91591818 -75058478 - ID4 SINE ID -13 70 23 2 1283 334 134 28 13 chrX 91592179 91592272 -75058024 + Tigger6a DNA MER2_type 805 899 -184 2 1283 499 278 27 34 chrX 91592294 91592443 -75057853 - B1F SINE Alu -1 148 1 2 1283 288 229 114 0 chrX 91592498 91592568 -75057728 + ID4_ SINE ID 3 80 -3 2 1283 279 0 0 0 chrX 91592592 91592623 -75057673 + (TAA)n Simple_repeat Simple_repeat 2 32 0 2 1283 222 150 0 0 chrX 91592782 91592822 -75057474 + (CTA)n Simple_repeat Simple_repeat 2 41 0 2 1283 198 0 0 0 chrX 91593116 91593138 -75057158 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 1283 765 238 0 0 chrX 91593140 91593291 -75057005 - B3A SINE B2 -47 151 1 2 1283 237 291 19 113 chrX 91593687 91593720 -75056576 + YREP_Mm Unknown Unknown 150 177 -1635 2 1283 273 300 78 29 chrX 91593720 91593823 -75056473 - PB1D7 SINE Alu -12 108 1 2 1283 237 291 19 113 chrX 91593823 91593948 -75056348 + YREP_Mm Unknown Unknown 178 293 -1519 2 1283 704 250 7 0 chrX 91593832 91593976 -75056320 - ID_B1 SINE B4 -4 220 76 2 1283 27 0 0 0 chrX 91594067 91594094 -75056202 + AT_rich Low_complexity Low_complexity 1 27 0 2 1283 623 197 16 8 chrX 91594101 91594224 -75056072 + B3 SINE B2 76 199 -17 2 1283 715 272 16 10 chrX 91594248 91594441 -75055855 - B3A SINE B2 -2 196 3 2 1283 948 133 186 37 chrX 91594474 91594662 -75055634 - B3 SINE B2 0 216 1 2 1283 4093 146 57 31 chrX 91595595 91596443 -75053853 + RMER13B LTR ERVK 1 870 -38 2 1283 561 201 141 6 chrX 91596796 91596966 -75053330 - ORR1D2 LTR MaLR -2 368 176 2 1283 292 164 20 0 chrX 91596967 91597024 -75053272 - ORR1D2 LTR MaLR -312 58 1 2 1283 1018 251 21 12 chrX 91597667 91597909 -75052387 + B4A SINE B4 1 244 -48 2 1283 378 307 25 34 chrX 91597955 91598073 -75052223 + ID_B1 SINE B4 2 118 -106 2 1283 192 91 44 22 chrX 91598160 91598205 -75052091 + GA-rich Low_complexity Low_complexity 4 49 0 2 1283 285 272 174 0 chrX 91598337 91598429 -75051867 + U13_ snRNA snRNA 1 108 0 2 1283 888 239 16 0 chrX 91598607 91598795 -75051501 - B3A SINE B2 -7 191 1 2 1283 1219 154 82 5 chrX 91599001 91599209 -75051087 + URR1B DNA MER1_type 1 224 -1 2 1283 326 282 115 30 chrX 91599228 91599420 -75050876 - L1M5 LINE L1 -1268 4878 4674 2 1283 875 188 5 43 chrX 91599539 91599723 -75050573 + B3 SINE B2 1 177 -39 2 1283 949 205 54 20 chrX 91599833 91600037 -75050259 + B3 SINE B2 1 211 -5 2 1283 662 221 79 0 chrX 91600055 91600195 -75050101 + ID_B1 SINE B4 3 153 -71 2 1283 667 203 28 0 chrX 91600199 91600342 -75049954 + B1_Mur3 SINE Alu 2 148 -1 2 1283 879 142 43 0 chrX 91603049 91603190 -75047106 + B1_Mur3 SINE Alu 1 147 -2 2 1283 211 361 0 0 chrX 91603501 91603573 -75046723 - ID4_ SINE ID 0 83 12 2 1283 291 292 102 19 chrX 91603837 91603945 -75046351 - PB1D10 SINE Alu 0 117 1 2 1283 297 338 0 97 chrX 91605123 91605277 -75045019 + L2b LINE L2 3240 3383 -4 2 1283 354 98 0 0 chrX 91605348 91605399 -75044897 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 1283 194 270 52 39 chrX 91605401 91605478 -75044818 - MIRb SINE MIR -72 196 119 2 1283 811 244 28 14 chrX 91606088 91606300 -75043996 + B3 SINE B2 2 216 0 2 1283 274 303 39 26 chrX 91606360 91606438 -75043858 - ID4_ SINE ID 0 83 5 2 1283 946 210 48 19 chrX 91606591 91606800 -75043496 + B3 SINE B2 2 216 0 2 1283 391 235 30 30 chrX 91607338 91607439 -75042857 + PB1D10 SINE Alu 1 101 -16 2 1283 402 39 0 0 chrX 91607471 91607523 -75042773 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1283 725 264 65 16 chrX 91607602 91607787 -75042509 - ID_B1 SINE B4 -9 215 22 2 1283 1450 76 16 0 chrX 91607940 91608124 -75042172 + B2_Mm2 SINE B2 1 187 -8 2 1283 625 308 33 7 chrX 91608131 91608338 -75041958 + B4 SINE B4 21 230 -62 2 1283 1139 242 55 22 chrX 91608343 91608617 -75041679 + B4 SINE B4 8 290 -2 2 1283 337 240 9 65 chrX 91608615 91608722 -75041574 + MT2B LTR ERVL 151 251 -350 2 1283 472 236 19 19 chrX 91608633 91608741 -75041555 + PB1D9 SINE Alu 6 113 -7 2 1283 200 59 0 29 chrX 91608743 91608778 -75041518 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2 1283 669 238 91 6 chrX 91608936 91609101 -75041195 - B3A SINE B2 -18 180 2 2 1283 819 157 220 6 chrX 91609269 91609442 -75040854 + Lx4B LINE L1 6503 6712 -346 2 1283 967 112 36 36 chrX 91609442 91609636 -75040660 + Lx4B LINE L1 6865 7058 0 2 1283 241 64 0 60 chrX 91609674 91609724 -75040572 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 1283 480 264 21 28 chrX 91610197 91610341 -75039955 - ID_B1 SINE B4 -2 222 80 2 1283 895 194 154 14 chrX 91610639 91610931 -75039365 - Charlie4a DNA MER1_type -145 363 31 2 1283 681 13 0 0 chrX 91611333 91611411 -75038885 + (TC)n Simple_repeat Simple_repeat 1 78 0 2 1283 328 183 0 35 chrX 91612952 91613037 -75037259 + CT-rich Low_complexity Low_complexity 3 84 0 2 1283 348 24 0 0 chrX 91613037 91613078 -75037218 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1283 718 154 22 58 chrX 91613261 91613399 -75036897 + B1_Mur2 SINE Alu 11 143 -6 2 1283 265 306 0 86 chrX 91613566 91613690 -75036606 + MIRb SINE MIR 52 168 -100 2 1283 976 171 0 12 chrX 91614324 91614490 -75035806 - B3 SINE B2 -5 211 48 2 1283 3805 167 5 9 chrX 91614495 91615129 -75035167 - Lx7 LINE L1 -559 7137 6507 2 1283 274 208 0 0 chrX 91615129 91615177 -75035119 - Lx7 LINE L1 -1164 6532 6485 2 1283 23 33 0 0 chrX 91615177 91615207 -75035089 + AT_rich Low_complexity Low_complexity 1 30 0 2 1283 474 196 0 0 chrX 91615351 91615448 -75034848 + T-rich Low_complexity Low_complexity 1 97 0 2 1283 192 148 222 0 chrX 91615450 91615504 -75034792 - MER5A DNA MER1_type -114 75 10 2 1283 676 296 22 0 chrX 91615826 91616005 -75034291 - B3A SINE B2 -14 184 2 2 1283 779 240 9 71 chrX 91616377 91616588 -75033708 - B3A SINE B2 0 198 1 2 1283 307 320 0 37 chrX 91616712 91616819 -75033477 + MER5B DNA MER1_type 2 104 -74 2 1283 811 163 30 0 chrX 91616981 91617116 -75033180 + B1_Mur2 SINE Alu 6 144 -5 2 1283 21 0 0 0 chrX 91618693 91618714 -75031582 + AT_rich Low_complexity Low_complexity 1 21 0 2 1283 183 156 0 0 chrX 91618841 91618873 -75031423 + T-rich Low_complexity Low_complexity 1 32 0 2 1283 228 272 11 147 chrX 91618888 91618983 -75031313 - B1F SINE Alu -1 148 67 2 1283 1190 47 20 7 chrX 91619130 91619280 -75031016 - L1Md_F2 LINE L1 -11 6571 6420 2 160 2258 55 0 0 chrX 91619281 91619553 -75030743 + L1Md_F2 LINE L1 6101 6372 -210 2 1284 225 0 0 0 chrX 91620401 91620426 -75029870 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1284 1176 157 10 20 chrX 91620470 91620665 -75029631 - B3 SINE B2 -6 210 18 3 1284 1027 226 54 0 chrX 91620853 91621039 -75029257 - B3 SINE B2 -20 196 1 3 1284 1244 68 0 0 chrX 91621382 91621528 -75028768 + B1_Mus2 SINE Alu 2 147 0 3 1284 796 249 101 5 chrX 91622137 91622335 -75027961 + ID_B1 SINE B4 1 217 -7 3 1284 339 191 0 14 chrX 91622351 91622420 -75027876 + ID4 SINE ID 9 76 -7 3 1284 320 224 0 84 chrX 91622420 91622434 -75027862 + ID SINE ID 9 84 -140 3 1284 214 167 48 0 chrX 91622453 91622495 -75027801 + A-rich Low_complexity Low_complexity 2 45 0 3 1284 473 198 31 10 chrX 91622498 91622595 -75027701 + B3A SINE B2 4 102 -96 3 1284 269 278 13 40 chrX 91622687 91622762 -75027534 + ID4 SINE ID 2 74 -9 3 1284 219 320 71 20 chrX 91622996 91623095 -75027201 + MER5A DNA MER1_type 60 163 -26 3 1284 2160 135 65 0 chrX 91623241 91623581 -75026715 - MTC LTR MaLR -59 362 1 3 1284 423 206 47 38 chrX 91623908 91624014 -75026282 - B1F SINE Alu 0 149 43 3 1284 412 136 85 12 chrX 91624886 91624968 -75025328 - B1_Mur4 SINE Alu 0 150 63 3 1284 501 222 88 93 chrX 91625650 91625809 -75024487 - Lx7 LINE L1 -18 7678 7518 3 1284 228 35 0 0 chrX 91625809 91625838 -75024458 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1284 2630 214 52 3 chrX 91625838 91626366 -75023930 - Lx7 LINE L1 -179 7517 6865 3 1284 863 211 28 0 chrX 91626925 91627067 -75023229 + RSINE1 SINE B4 3 148 -17 3 1284 191 231 31 0 chrX 91627638 91627703 -75022593 + CT-rich Low_complexity Low_complexity 2 68 0 3 1284 550 236 30 45 chrX 91627705 91627838 -75022458 - B1F SINE Alu -17 132 2 3 1284 657 290 135 53 chrX 91628143 91628409 -75021887 + B4 SINE B4 4 291 -1 3 1284 187 104 0 40 chrX 91628576 91628626 -75021670 + (CAAAAA)n Simple_repeat Simple_repeat 2 49 0 3 1284 239 250 0 32 chrX 91628684 91628702 -75021594 + B4A SINE B4 72 87 -205 3 1284 380 186 289 0 chrX 91628702 91628799 -75021497 + B1_Mm SINE Alu 3 127 -20 3 1284 326 299 84 0 chrX 91629379 91629486 -75020810 + PB1D10 SINE Alu 1 116 -1 3 1284 8571 188 54 30 chrX 91629563 91632171 -75018125 - Lx5 LINE L1 -19 7031 4340 3 1284 493 250 56 46 chrX 91632147 91632344 -75017952 - Lx5 LINE L1 -6638 1090 892 3 1284 654 270 34 7 chrX 91632536 91632685 -75017611 - B3A SINE B2 -44 154 2 3 1284 536 238 22 44 chrX 91633597 91633733 -75016563 + B1_Mur2 SINE Alu 2 134 -15 3 1284 195 42 0 0 chrX 91633742 91633766 -75016530 + (CAA)n Simple_repeat Simple_repeat 2 25 0 3 1284 22 0 0 0 chrX 91634010 91634032 -75016264 + AT_rich Low_complexity Low_complexity 1 22 0 3 1284 24 0 0 0 chrX 91634501 91634525 -75015771 + AT_rich Low_complexity Low_complexity 1 24 0 3 1284 854 138 185 36 chrX 91634567 91634762 -75015534 - MTD LTR MaLR 0 419 196 3 1284 2600 240 26 18 chrX 91634797 91635362 -75014934 - Lx6 LINE L1 -4 7456 6887 3 1284 885 194 15 20 chrX 91635370 91635565 -75014731 - MTD LTR MaLR -225 194 1 3 1284 357 280 111 0 chrX 91635708 91635831 -75014465 + B1F SINE Alu 4 144 -6 3 1284 272 273 37 61 chrX 91635825 91635836 -75014460 + B4 SINE B4 80 155 -133 3 1284 369 209 15 0 chrX 91635836 91635903 -75014393 + PB1D10 SINE Alu 1 68 -49 3 1284 287 289 44 0 chrX 91636197 91636287 -75014009 - L1MC5 LINE L1 -871 7090 6997 3 1284 642 132 52 204 chrX 91636503 91636675 -75013621 + B1_Mus2 SINE Alu 2 147 0 3 1284 324 169 7 78 chrX 91636681 91636822 -75013474 + A-rich Low_complexity Low_complexity 5 135 0 3 1284 318 221 72 14 chrX 91636984 91637053 -75013243 + ID4_ SINE ID 2 74 -9 3 1284 339 267 118 0 chrX 91637121 91637237 -75013059 + B1F SINE Alu 4 136 -13 3 1284 484 225 107 9 chrX 91637357 91637469 -75012827 + B1F SINE Alu 26 148 -1 3 1284 347 318 27 9 chrX 91638179 91638290 -75012006 - HAL1 LINE L1 -1623 884 772 3 1284 342 0 0 0 chrX 91638395 91638433 -75011863 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1284 239 274 129 0 chrX 91638438 91638500 -75011796 - ID4 SINE ID -6 77 8 3 1284 362 253 25 0 chrX 91638515 91638594 -75011702 - ID4_ SINE ID 0 83 3 3 1284 309 264 45 0 chrX 91638778 91638858 -75011438 + B1F1 SINE Alu 35 117 0 3 1284 196 111 22 22 chrX 91638866 91638912 -75011384 + A-rich Low_complexity Low_complexity 2 47 0 3 1284 437 250 9 9 chrX 91638992 91639101 -75011195 + L1MB8 LINE L1 5862 5970 -208 3 1284 360 94 0 0 chrX 91639154 91639207 -75011089 + (TCCC)n Simple_repeat Simple_repeat 3 55 0 3 1284 426 209 178 0 chrX 91639263 91639392 -75010904 + L1MB8 LINE L1 6027 6178 0 3 1284 619 279 40 17 chrX 91640153 91640328 -75009968 + MER5A DNA MER1_type 5 183 -6 3 1284 450 207 54 9 chrX 91640940 91641052 -75009244 + L1MB4 LINE L1 6050 6166 -14 3 1284 23 33 0 0 chrX 91641056 91641086 -75009210 + AT_rich Low_complexity Low_complexity 1 30 0 3 1284 228 230 91 39 chrX 91641298 91641375 -75008921 + ID4 SINE ID 1 81 -2 3 1284 521 246 125 68 chrX 91641758 91641950 -75008346 + B3A SINE B2 1 203 -13 3 1284 217 128 51 0 chrX 91642116 91642155 -75008141 + B3A SINE B2 6 46 -152 3 1284 199 50 0 70 chrX 91642155 91642198 -75008098 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 3 1284 645 203 6 97 chrX 91642199 91642364 -75007932 + B3 SINE B2 42 191 -25 3 1284 603 112 0 0 chrX 91642370 91642477 -75007819 + (CA)n Simple_repeat Simple_repeat 1 107 0 3 1284 220 229 0 0 chrX 91642946 91642994 -75007302 + T-rich Low_complexity Low_complexity 1 48 0 3 1284 415 282 62 12 chrX 91642998 91643129 -75007167 - PB1D7 SINE Alu 0 149 17 3 1284 351 267 67 0 chrX 91643168 91643243 -75007053 - ID2 SINE ID 0 83 4 3 1284 424 0 36 0 chrX 91643291 91643347 -75006949 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 1284 768 259 13 13 chrX 91643845 91643994 -75006302 + RSINE1 SINE B4 1 149 -16 3 1284 522 181 214 8 chrX 91644046 91644163 -75006133 + B3 SINE B2 1 141 -75 3 1284 780 253 121 0 chrX 91644872 91645062 -75005234 + B3 SINE B2 1 213 -3 3 1284 261 0 0 0 chrX 91645639 91645668 -75004628 + (CTA)n Simple_repeat Simple_repeat 1 29 0 3 1284 876 167 49 12 chrX 91645668 91645832 -75004464 - B3 SINE B2 -10 206 37 3 1284 1491 56 22 0 chrX 91645967 91646147 -75004149 + B2_Mm1t SINE B2 2 185 -8 3 1284 1285 47 0 0 chrX 91646337 91646485 -75003811 - B1_Mus1 SINE Alu 0 148 1 3 1284 890 247 16 63 chrX 91646668 91646923 -75003373 + B4 SINE B4 50 292 0 3 1284 330 259 35 35 chrX 91647001 91647117 -75003179 - PB1D10 SINE Alu 0 117 2 3 1284 282 306 104 0 chrX 91647644 91647778 -75002518 - B1F1 SINE Alu -1 148 1 3 1284 250 135 27 0 chrX 91648058 91648095 -75002201 - B1_Mur3 SINE Alu -50 99 62 3 1284 8539 30 1 7 chrX 91648138 91648610 -75001686 - L1Md_F2 LINE L1 -1 6581 6115 3 1284 2913 44 67 6 chrX 91648610 91648954 -75001342 - RLTR10B2 LTR ERVK 0 365 1 3 1284 17341 56 1 3 chrX 91648954 91651355 -74998941 - L1Md_F2 LINE L1 -468 6114 3717 3 1284 726 242 0 63 chrX 91651369 91651528 -74998768 - B1_Mur3 SINE Alu 0 149 1 3 1284 228 137 0 0 chrX 91651542 91651593 -74998703 + (T)n Simple_repeat Simple_repeat 1 51 0 3 1284 1240 81 0 0 chrX 91651593 91651741 -74998555 - B1_Mus1 SINE Alu 0 148 1 3 1284 228 270 56 80 chrX 91651875 91652088 -74998208 - L1MC4 LINE L1 -128 7914 7707 3 1284 304 373 93 0 chrX 91652134 91652295 -74998001 - L1ME3B LINE L1 -61 6179 6004 3 1284 245 225 67 53 chrX 91652297 91652372 -74997924 - PB1D10 SINE Alu 0 117 42 3 1284 414 69 0 0 chrX 91652482 91652540 -74997756 + (TCTG)n Simple_repeat Simple_repeat 2 59 0 3 1284 667 246 16 0 chrX 91652561 91652687 -74997609 - B1_Mur1 SINE Alu -16 133 6 3 1284 1240 54 0 13 chrX 91652829 91652978 -74997318 - B1_Mus1 SINE Alu 0 148 2 3 1284 387 0 0 0 chrX 91653133 91653176 -74997120 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1284 350 302 10 0 chrX 91653177 91653273 -74997023 - PB1D10 SINE Alu -20 97 1 3 1284 264 268 60 30 chrX 91653476 91653576 -74996720 - PB1D7 SINE Alu -13 107 5 3 1284 760 218 42 21 chrX 91653949 91654141 -74996155 + L1MB1 LINE L1 5885 6080 -88 3 1284 225 150 81 32 chrX 91654247 91654309 -74995987 - L1MB1 LINE L1 -6 6183 6119 3 1284 426 284 123 115 chrX 91654398 91654764 -74995532 - MLT1D LTR MaLR -7 498 130 3 1284 433 328 69 69 chrX 91654791 91655007 -74995289 - B4 SINE B4 -44 248 33 3 1284 1587 216 85 49 chrX 91655077 91655443 -74994853 - MTEa LTR MaLR 0 379 1 3 1284 277 273 78 0 chrX 91656130 91656207 -74994089 - PB1D10 SINE Alu -5 112 30 3 1284 253 244 75 75 chrX 91656756 91656849 -74993447 - MER94 DNA AcHobo 0 134 42 3 1284 210 118 0 0 chrX 91657883 91657917 -74992379 + (CAA)n Simple_repeat Simple_repeat 3 36 0 3 1284 219 36 0 0 chrX 91658096 91658124 -74992172 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 3 1284 21 57 0 0 chrX 91658410 91658445 -74991851 + AT_rich Low_complexity Low_complexity 1 35 0 3 1284 412 152 36 60 chrX 91658491 91658575 -74991721 - ID4_ SINE ID 0 83 2 3 1284 290 305 28 19 chrX 91658585 91658692 -74991604 - PB1D10 SINE Alu 0 117 10 3 1284 405 0 0 0 chrX 91658830 91658875 -74991421 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1284 348 269 0 0 chrX 91658877 91658944 -74991352 - ID4_ SINE ID -14 69 3 3 1284 346 329 95 12 chrX 91659132 91659301 -74990995 - L3 LINE CR1 -122 4367 4185 4 1284 180 308 138 0 chrX 91659361 91659426 -74990870 + MER5A DNA MER1_type 49 122 -67 4 1284 876 259 134 8 chrX 91659667 91659920 -74990376 + B4A SINE B4 1 285 -7 4 1284 239 276 35 0 chrX 91660022 91660080 -74990216 - ID4_ SINE ID -22 61 2 4 1284 461 236 0 0 chrX 91660380 91660469 -74989827 - PB1D10 SINE Alu -6 111 23 4 1284 231 295 95 42 chrX 91660493 91660755 -74989541 - L1MC5 LINE L1 -372 7589 7314 4 1284 21 0 0 0 chrX 91660935 91660956 -74989340 + AT_rich Low_complexity Low_complexity 1 21 0 4 1284 571 247 34 20 chrX 91660956 91661105 -74989191 - Lx6 LINE L1 -27 7433 7283 4 1284 1116 283 35 0 chrX 91661091 91661374 -74988922 - Lx5 LINE L1 -243 6807 6515 4 1284 237 260 80 27 chrX 91661568 91661580 -74988716 + B4 SINE B4 5 78 -209 4 1284 347 224 0 0 chrX 91661580 91661638 -74988658 + ID4 SINE ID 16 73 -10 4 1284 749 238 178 0 chrX 91662692 91662923 -74987373 - Lx9 LINE L1 -7 7637 7366 4 1284 1999 170 17 84 chrX 91663043 91663448 -74986848 + ORR1C1 LTR MaLR 1 378 0 4 1284 25 51 0 0 chrX 91663874 91663913 -74986383 + AT_rich Low_complexity Low_complexity 1 39 0 4 1284 1178 89 0 0 chrX 91663916 91664062 -74986234 - B1_Mus1 SINE Alu -1 147 2 4 1284 611 197 112 15 chrX 91665413 91665547 -74984749 - B1_Mur3 SINE Alu -1 148 2 4 1284 2292 209 118 83 chrX 91665766 91666454 -74983842 - Lx6 LINE L1 -26 7434 6723 4 1284 363 23 0 0 chrX 91666814 91666858 -74983438 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1284 747 227 107 10 chrX 91666969 91667174 -74983122 - MTE2a LTR MaLR -2 377 153 4 1284 745 66 9 0 chrX 91668077 91668183 -74982113 - B1_Mm SINE Alu 0 147 41 4 1284 294 143 79 79 chrX 91668119 91668195 -74982101 - RLTR25B LTR ERVK -519 509 434 4 1284 584 270 55 15 chrX 91668936 91669135 -74981161 - L1M2 LINE L1 -578 5734 5528 4 1284 316 318 11 0 chrX 91669390 91669478 -74980818 - RSINE1 SINE B4 -74 91 3 4 1284 200 0 0 91 chrX 91670061 91670094 -74980202 + (TTTTA)n Simple_repeat Simple_repeat 4 33 0 4 1284 1810 246 82 2 chrX 91670099 91670527 -74979769 - Lx6 LINE L1 -25 7435 6974 4 1284 226 217 0 0 chrX 91670527 91670573 -74979723 - RSINE1 SINE B4 -111 54 9 4 1284 376 145 130 0 chrX 91670620 91670689 -74979607 - Lx7 LINE L1 -727 6969 6892 4 1284 226 106 85 0 chrX 91670689 91670736 -74979560 + (TCTCTG)n Simple_repeat Simple_repeat 4 54 0 4 1284 6152 174 94 46 chrX 91670736 91672208 -74978088 - Lx6 LINE L1 -565 6895 5409 4 1284 783 78 0 0 chrX 91672233 91672349 -74977947 - B1_Mus1 SINE Alu 0 148 33 4 1284 222 323 0 0 chrX 91673021 91673114 -74977182 + T-rich Low_complexity Low_complexity 1 93 0 4 1284 198 103 0 0 chrX 91673733 91673762 -74976534 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 4 1284 425 181 11 0 chrX 91674514 91674608 -74975688 + GA-rich Low_complexity Low_complexity 1 95 0 4 1284 1923 160 84 9 chrX 91674608 91675036 -74975260 + RLTR40 LTR ERVK 73 532 -285 4 1284 497 289 131 14 chrX 91675092 91675313 -74974983 + RMER5 LTR ERV1 288 534 0 4 1284 327 155 72 72 chrX 91675363 91675488 -74974808 + Lx9 LINE L1 7517 7641 -3 4 1284 360 176 0 0 chrX 91675567 91675635 -74974661 + (TG)n Simple_repeat Simple_repeat 1 68 0 4 1284 337 280 0 0 chrX 91675852 91675927 -74974369 - ID_B1 SINE B4 -51 173 99 4 1284 510 201 97 0 chrX 91678046 91678180 -74972116 - RMER5 LTR ERV1 -6 528 382 4 1284 1511 242 57 59 chrX 91678236 91678291 -74972005 + RMER5 LTR ERV1 13 61 -473 4 1284 925 69 115 0 chrX 91678291 91678421 -74971875 + B1_Mur3 SINE Alu 5 149 0 4 1284 1511 242 57 59 chrX 91678421 91678888 -74971408 + RMER5 LTR ERV1 62 534 0 4 1284 1240 28 0 0 chrX 91679175 91679316 -74970980 + B1_Mus2 SINE Alu 1 141 -6 4 1284 412 181 0 35 chrX 91679398 91679484 -74970812 - B1_Mur1 SINE Alu 0 149 67 4 1284 641 300 92 5 chrX 91679577 91679949 -74970347 + LSU-rRNA_Hsa rRNA rRNA 2388 2832 -2203 4 1284 307 226 162 17 chrX 91680056 91680173 -74970123 - L1_Mur3 LINE L1 -1351 4529 4396 4 1284 673 176 20 40 chrX 91680175 91680323 -74969973 - ORR1D2 LTR MaLR -2 368 224 4 1284 1068 261 19 41 chrX 91680374 91680645 -74969651 - ORR1D2 LTR MaLR -105 265 1 4 1284 1092 246 48 156 chrX 91680646 91680674 -74969622 - L1_Mur3 LINE L1 -1481 4399 4372 4 1284 243 0 0 0 chrX 91680674 91680701 -74969595 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 4 1284 1092 246 48 156 chrX 91680701 91680957 -74969339 - L1_Mur3 LINE L1 -1509 4371 4138 4 1284 1896 113 0 18 chrX 91680957 91681237 -74969059 - Lx4A LINE L1 -2 7056 6782 4 1284 1092 246 48 156 chrX 91681237 91681562 -74968734 - L1_Mur3 LINE L1 -1743 4137 3856 4 1284 3386 237 90 24 chrX 91681552 91682812 -74967484 - Lx9 LINE L1 -1503 6193 4804 4 1284 2061 172 31 34 chrX 91683166 91683551 -74966745 + ORR1C2 LTR MaLR 1 384 0 4 1284 3855 241 94 22 chrX 91683776 91684770 -74965526 + Lx9 LINE L1 6375 7424 -220 4 1284 183 80 0 0 chrX 91684770 91684795 -74965501 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 1284 3855 241 94 22 chrX 91684795 91684979 -74965317 + Lx9 LINE L1 7425 7637 -7 4 1284 235 275 19 29 chrX 91686505 91686610 -74963686 + (TATATG)n Simple_repeat Simple_repeat 5 108 0 4 1284 9074 112 59 7 chrX 91686724 91688113 -74962183 + Lx4A LINE L1 5587 7047 -11 4 1284 426 115 11 22 chrX 91688945 91689034 -74961262 + Lx7 LINE L1 7607 7694 -2 4 1284 346 241 0 12 chrX 91689154 91689234 -74961062 - Lx8 LINE L1 -354 7119 7041 4 1284 259 261 29 0 chrX 91689227 91689296 -74961000 + Lx8 LINE L1 6847 6917 -556 4 1284 204 67 0 0 chrX 91689442 91689472 -74960824 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1284 386 198 112 0 chrX 91689476 91689592 -74960704 + Lx9 LINE L1 7515 7643 -1 4 1284 272 94 0 36 chrX 91689601 91689656 -74960640 + L1Md_F2 LINE L1 6530 6582 0 4 1284 504 273 84 20 chrX 91689714 91689916 -74960380 + MTD LTR MaLR 196 410 -9 4 1284 1185 323 50 5 chrX 91689975 91690417 -74959879 - Lx8 LINE L1 -819 6654 6193 4 1284 3306 227 46 7 chrX 91690421 91691249 -74959047 + Lx9 LINE L1 6784 7643 -1 4 1284 348 244 24 47 chrX 91691564 91691724 -74958572 + L1M2 LINE L1 4816 4966 -1177 4 1284 3640 112 70 34 chrX 91691794 91692378 -74957918 - RLTR1D LTR ERV1 0 605 1 4 1284 821 178 37 73 chrX 91692827 91693045 -74957251 + B3 SINE B2 2 211 -5 4 1284 243 0 0 0 chrX 91694525 91694552 -74955744 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1284 225 221 16 8 chrX 91695785 91695915 -74954381 + GA-rich Low_complexity Low_complexity 1 131 0 4 1284 539 53 0 13 chrX 91695915 91695991 -74954305 + (GA)n Simple_repeat Simple_repeat 1 75 0 4 1284 266 368 7 7 chrX 91696710 91696863 -74953433 + MIRb SINE MIR 1 153 -115 4 1284 204 111 0 0 chrX 91697172 91697208 -74953088 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1284 1255 204 183 25 chrX 91697289 91697650 -74952646 - MTD LTR MaLR -1 418 1 4 1284 21 0 0 0 chrX 91699108 91699129 -74951167 + GC_rich Low_complexity Low_complexity 1 21 0 4 1284 2049 115 47 6 chrX 91700839 91701179 -74949117 + ORR1B2 LTR MaLR 14 367 0 4 1284 281 0 82 0 chrX 91701197 91701246 -74949050 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 4 1284 236 100 0 24 chrX 91703795 91703836 -74946460 + (GGGGA)n Simple_repeat Simple_repeat 1 40 0 4 1284 1185 63 11 17 chrX 91703843 91704020 -74946276 + (GGGAGA)n Simple_repeat Simple_repeat 2 177 0 4 1284 671 119 18 0 chrX 91704358 91704467 -74945829 + PB1D9 SINE Alu 10 120 0 4 1284 540 0 0 0 chrX 91704467 91704527 -74945769 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 1284 439 207 78 35 chrX 91706737 91706852 -74943444 + MTD LTR MaLR 299 418 -1 4 1284 396 0 0 0 chrX 91706947 91706991 -74943305 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1284 266 368 7 7 chrX 91707300 91707453 -74942843 - MIRb SINE MIR -115 153 1 4 1284 467 60 0 15 chrX 91708172 91708240 -74942056 + (TC)n Simple_repeat Simple_repeat 1 67 0 4 1284 446 275 0 16 chrX 91708256 91708378 -74941918 + CT-rich Low_complexity Low_complexity 2 121 0 4 1284 225 0 0 0 chrX 91709603 91709628 -74940668 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1284 808 178 37 73 chrX 91711108 91711326 -74938970 - B3 SINE B2 -5 211 2 4 1284 3640 112 70 34 chrX 91711779 91712363 -74937933 + RLTR1D LTR ERV1 1 605 0 4 1284 358 242 23 56 chrX 91712433 91712595 -74937701 - L1M2 LINE L1 -1177 4966 4798 4 1284 3355 225 46 7 chrX 91712908 91713736 -74936560 - Lx9 LINE L1 -1 7643 6784 4 1284 890 300 50 10 chrX 91713740 91714043 -74936253 + Lx8 LINE L1 6193 6507 -966 4 1284 825 301 4 25 chrX 91714290 91714337 -74935959 - MTD LTR MaLR -136 283 242 4 1284 2565 95 0 0 chrX 91714337 91714664 -74935632 - ORR1A2 LTR MaLR 0 327 1 4 1284 825 301 4 25 chrX 91714664 91714858 -74935438 - MTD LTR MaLR -178 241 47 4 1284 2592 134 5 0 chrX 91714858 91715231 -74935065 - Lx4B LINE L1 -362 6696 6322 4 1284 1471 180 21 7 chrX 91715246 91715526 -74934770 + Lx4B LINE L1 6692 6975 -83 4 1284 669 70 0 0 chrX 91715670 91715770 -74934526 + (TC)n Simple_repeat Simple_repeat 1 100 0 4 1284 395 102 0 0 chrX 91715885 91715944 -74934352 + B1_Mur4 SINE Alu 1 59 -91 4 1284 245 144 54 98 chrX 91715958 91716050 -74934246 + Lx9 LINE L1 7510 7597 -47 4 1284 475 153 40 40 chrX 91716069 91716219 -74934077 - MTC-int LTR MaLR -39 1219 1070 4 1284 400 276 107 30 chrX 91716219 91716387 -74933909 - MTC-int LTR MaLR -305 953 773 4 1284 904 150 0 7 chrX 91716398 91716546 -74933750 - B1_Mur3 SINE Alu 0 149 3 4 1284 306 210 0 0 chrX 91716619 91716700 -74933596 - L1M2a LINE L1 -4958 2210 2130 4 1284 3173 80 31 2 chrX 91717725 91718150 -74932146 - RLTR9B LTR ERVK 0 437 1 4 1284 280 213 40 13 chrX 91718313 91718389 -74931907 + MTE2a LTR MaLR 23 100 -319 4 1284 282 121 321 44 chrX 91718389 91718501 -74931795 - B2_Mm2 SINE B2 -6 189 47 4 1284 1374 80 11 0 chrX 91718577 91718753 -74931543 - B2_Mm1t SINE B2 -14 179 2 4 1284 952 309 12 19 chrX 91718755 91719075 -74931221 + MTE2a LTR MaLR 59 376 -3 4 1284 210 128 0 0 chrX 91719327 91719366 -74930930 + (TTAA)n Simple_repeat Simple_repeat 4 42 0 5 1284 2706 163 39 37 chrX 91719605 91720146 -74930150 - RMER15 LTR ERVL -5 570 29 5 1284 779 190 196 27 chrX 91720155 91720339 -74929957 - B3 SINE B2 -1 215 1 5 1284 431 227 0 7 chrX 91720408 91720563 -74929733 + CT-rich Low_complexity Low_complexity 1 154 0 5 1284 8242 44 5 2 chrX 91720612 91722274 -74928022 - L1Md_F2 LINE L1 -3 6579 4913 5 1284 736 184 92 42 chrX 91722772 91722914 -74927382 + B1_Mur4 SINE Alu 2 150 0 5 1284 289 320 0 0 chrX 91722929 91723026 -74927270 - L1MB7 LINE L1 -15 6169 6073 5 1284 292 297 0 0 chrX 91723078 91723152 -74927144 - ID4 SINE ID 0 83 10 5 1284 267 252 47 63 chrX 91723154 91723258 -74927038 - L1M3 LINE L1 -979 5161 5055 5 1284 1239 254 78 113 chrX 91723258 91723896 -74926400 - RLTR18 LTR ERVK 0 616 1 5 1284 267 252 47 63 chrX 91723896 91723918 -74926378 - L1M3 LINE L1 -1086 5054 5037 5 1284 541 226 48 19 chrX 91723918 91724156 -74926140 + L1M3 LINE L1 5213 5464 -719 5 1284 519 17 0 0 chrX 91724167 91724227 -74926069 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 1284 407 235 19 10 chrX 91724309 91724412 -74925884 + L1M3 LINE L1 5633 5736 -453 5 1284 1041 308 56 35 chrX 91724894 91725433 -74924863 - L1_Mur3 LINE L1 -6483 1229 680 5 1284 215 292 137 14 chrX 91725853 91725926 -74924370 - B4A SINE B4 -208 84 3 5 1284 396 0 0 0 chrX 91726525 91726569 -74923727 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1284 423 269 125 8 chrX 91726572 91726692 -74923604 - RSINE1 SINE B4 -29 136 3 5 1284 8053 65 22 0 chrX 91727254 91728949 -74921347 + L1_Mus2 LINE L1 4836 6566 0 5 1284 272 310 65 84 chrX 91729388 91729649 -74920647 - L1M4c LINE L1 -4612 1772 1517 5 1284 430 311 6 98 chrX 91729651 91729815 -74920481 - B4 SINE B4 -143 149 1 5 1284 2713 46 31 8 chrX 91729901 91730252 -74920044 - Lx3_Mus LINE L1 -251 6758 6400 5 1284 1098 83 7 27 chrX 91730253 91730402 -74919894 - B1_Mus1 SINE Alu -2 146 1 5 1284 423 0 0 0 chrX 91730417 91730464 -74919832 + (TATG)n Simple_repeat Simple_repeat 2 48 0 5 1284 1071 79 0 26 chrX 91730469 91730624 -74919672 - B2_Mm2 SINE B2 -43 152 2 5 1284 544 91 39 0 chrX 91730624 91730701 -74919595 - Lx3_Mus LINE L1 -606 6403 6324 5 1284 1330 74 42 11 chrX 91730701 91730892 -74919404 + Lx3_Mus LINE L1 6802 6998 -11 5 1284 21 0 0 0 chrX 91730895 91730916 -74919380 + AT_rich Low_complexity Low_complexity 1 21 0 5 1284 403 260 105 45 chrX 91730961 91731094 -74919202 + B1F2 SINE Alu 1 141 -8 5 1284 1387 263 52 14 chrX 91731140 91731646 -74918650 - Lx9 LINE L1 -5 7639 7089 5 1284 432 0 0 0 chrX 91731658 91731706 -74918590 + (TTA)n Simple_repeat Simple_repeat 2 49 0 5 1284 2059 146 6 27 chrX 91731711 91732042 -74918254 - Lx3B LINE L1 -3 6970 6647 5 1284 7990 75 16 5 chrX 91732046 91733813 -74916483 - L1_Mus1 LINE L1 0 6567 4802 5 1284 3266 291 94 20 chrX 91733897 91735293 -74915003 - Lx8 LINE L1 -363 7110 5608 5 1284 701 242 84 78 chrX 91735360 91735713 -74914583 + L1M2 LINE L1 4439 4838 -1305 5 1284 289 188 69 50 chrX 91735756 91735857 -74914439 - Lx6 LINE L1 0 7460 7358 5 1284 279 253 76 11 chrX 91735854 91735946 -74914350 - L1_Mur3 LINE L1 -2916 2964 2867 5 1284 1041 111 6 6 chrX 91735948 91736111 -74914185 - L1_Mur1 LINE L1 -1663 4223 4061 5 1284 5538 76 20 0 chrX 91737596 91738292 -74912004 - L1_Mus2 LINE L1 0 6566 5857 5 1284 502 270 69 30 chrX 91739345 91739578 -74910718 - L1M3 LINE L1 -815 5325 5084 5 1284 4855 42 2 0 chrX 91739623 91740196 -74910100 + L1_Mm LINE L1 5283 5856 -27 5 1284 5201 54 0 2 chrX 91740194 91740827 -74909469 + L1Md_F2 LINE L1 5939 6570 -12 5 1284 328 301 122 8 chrX 91740844 91741089 -74909207 - L1M3 LINE L1 -1140 5003 4731 5 1284 355 269 0 11 chrX 91741110 91741204 -74909092 - PB1D10 SINE Alu 0 117 25 5 1284 699 78 0 0 chrX 91741207 91741297 -74908999 + ORR1A2-int LTR MaLR 1874 1963 0 5 1284 2443 71 48 60 chrX 91741297 91741628 -74908668 + ORR1A2 LTR MaLR 1 327 0 5 1284 802 60 248 0 chrX 91741637 91741754 -74908542 + B1_Mus1 SINE Alu 2 147 -1 5 1284 257 338 0 0 chrX 91741786 91741863 -74908433 + PB1 SINE Alu 44 120 -7 5 1284 216 238 0 0 chrX 91741866 91741929 -74908367 + A-rich Low_complexity Low_complexity 1 63 0 5 1284 705 262 10 10 chrX 91742348 91742556 -74907740 + L1_Rod LINE L1 901 1108 -6500 5 1284 460 45 15 15 chrX 91742556 91742624 -74907672 + (TTTC)n Simple_repeat Simple_repeat 1 68 0 5 1284 625 110 0 0 chrX 91742624 91742715 -74907581 - B1_Mur4 SINE Alu -1 149 59 5 1284 1740 211 57 23 chrX 91742750 91743297 -74906999 + L1_Rod LINE L1 1162 1733 -4114 5 1284 272 326 58 73 chrX 91743319 91743524 -74906772 - L2a LINE L2 -38 3388 3187 5 1284 345 333 39 71 chrX 91743564 91743719 -74906577 + B4A SINE B4 72 221 -71 5 1284 819 169 29 7 chrX 91743586 91743723 -74906573 + B1_Mur3 SINE Alu 7 146 -3 5 1284 543 31 0 0 chrX 91743762 91743827 -74906469 + (TCTCCC)n Simple_repeat Simple_repeat 6 70 0 5 1284 442 31 31 0 chrX 91743829 91743893 -74906403 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 1284 300 316 133 0 chrX 91744168 91744266 -74906030 - MT2A LTR ERVL -96 437 327 5 1284 955 222 132 69 chrX 91744271 91744320 -74905976 - ERVL-B4-int LTR ERVL -230 5531 5480 5 1284 959 53 104 83 chrX 91744320 91744464 -74905832 - B1_Mus1 SINE Alu -1 147 1 5 1284 955 222 132 69 chrX 91744464 91744733 -74905563 - ERVL-B4-int LTR ERVL -282 5479 5193 5 1284 453 237 10 0 chrX 91744733 91744830 -74905466 + MTD LTR MaLR 1 98 -321 5 1284 3019 44 5 5 chrX 91744834 91745220 -74905076 + MTA_Mm LTR MaLR 1 386 -10 5 1284 1098 125 33 61 chrX 91745165 91745378 -74904918 - MTA_Mm LTR MaLR -185 211 5 5 1284 1242 203 89 4 chrX 91745377 91745624 -74904672 + MTD LTR MaLR 110 377 -42 5 1284 2365 233 71 36 chrX 91745634 91746252 -74904044 - ERVL-B4-int LTR ERVL -628 5086 4447 5 1284 292 360 40 93 chrX 91746254 91746365 -74903931 - L2a LINE L2 -618 2801 2696 5 1284 4923 137 24 15 chrX 91746365 91747112 -74903184 - Lx2 LINE L1 -7 6990 6237 5 1284 292 360 40 93 chrX 91747112 91747248 -74903048 - L2a LINE L2 -724 2695 2567 5 1284 22 88 0 0 chrX 91747578 91747635 -74902661 + AT_rich Low_complexity Low_complexity 1 57 0 5 1284 1297 48 0 0 chrX 91747677 91747824 -74902472 + B1_Mus2 SINE Alu 1 147 0 5 1284 266 73 24 0 chrX 91747859 91747900 -74902396 + (TTATA)n Simple_repeat Simple_repeat 5 46 0 5 1284 758 126 181 0 chrX 91747900 91748027 -74902269 - B1_Mur4 SINE Alu 0 150 1 5 1284 213 227 0 0 chrX 91748207 91748251 -74902045 + (CAA)n Simple_repeat Simple_repeat 2 45 0 5 1284 216 67 0 0 chrX 91748437 91748467 -74901829 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 5 1284 7644 199 71 36 chrX 91748487 91750274 -74900022 - Lx6 LINE L1 -184 7276 5393 5 160 2142 61 8 4 chrX 91750274 91750537 -74899759 - L1_Mus2 LINE L1 -1 6565 6302 5 1285 3643 147 106 95 chrX 91750537 91750978 -74899318 - Lx6 LINE L1 -488 5392 5021 5 1285 21 24 0 47 chrX 91751038 91751063 -74899233 + AT_rich Low_complexity Low_complexity 1 24 0 5 1285 829 174 28 35 chrX 91751063 91751206 -74899090 - B1_Mur2 SINE Alu -6 143 2 5 1285 21 24 0 47 chrX 91751206 91751223 -74899073 + AT_rich Low_complexity Low_complexity 1 17 0 5 1285 1531 246 17 14 chrX 91751464 91751822 -74898474 - MTE2b LTR MaLR -2 377 19 5 1285 759 120 0 0 chrX 91752353 91752470 -74897826 + (GA)n Simple_repeat Simple_repeat 2 118 0 5 1285 195 367 39 32 chrX 91752664 91752807 -74897489 - MIRc SINE MIR -83 185 40 5 1285 1378 257 58 6 chrX 91755082 91755430 -74894866 - ORR1D2 LTR MaLR -4 366 1 5 1285 1279 54 0 0 chrX 91755484 91755631 -74894665 + B1_Mm SINE Alu 1 147 0 5 1285 192 125 0 0 chrX 91755631 91755663 -74894633 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1285 5742 30 0 0 chrX 91755700 91756360 -74893936 - L1Md_A LINE L1 -298 6284 5625 5 1285 2482 42 0 3 chrX 91756360 91756647 -74893649 + L1Md_A LINE L1 6295 6580 -2 5 1285 7509 153 47 15 chrX 91756682 91757972 -74892324 - Lx5 LINE L1 -28 7022 5691 5 1285 378 0 0 0 chrX 91758149 91758191 -74892105 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 5 1285 838 143 7 15 chrX 91758193 91758328 -74891968 - B1_Mur2 SINE Alu -7 142 9 5 1285 889 256 113 21 chrX 91758442 91758633 -74891663 - Lx7 LINE L1 -16 7680 7327 5 1285 192 77 0 0 chrX 91758633 91758659 -74891637 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 1285 889 279 79 14 chrX 91758659 91758901 -74891395 - Lx7 LINE L1 -370 7326 7068 5 1285 958 80 0 0 chrX 91759631 91759756 -74890540 - B1_Mus1 SINE Alu 0 148 24 5 1285 938 161 6 0 chrX 91759856 91760030 -74890266 + CT-rich Low_complexity Low_complexity 2 176 0 5 1285 1243 69 0 0 chrX 91760044 91760189 -74890107 - B1_Mus1 SINE Alu -2 146 2 5 1285 2490 63 3 0 chrX 91760530 91760848 -74889448 - ORR1A2 LTR MaLR -8 319 1 5 1285 1032 60 45 0 chrX 91761237 91761364 -74888932 + B1_Mus1 SINE Alu 2 134 -14 5 1285 549 0 0 0 chrX 91761364 91761425 -74888871 + (GA)n Simple_repeat Simple_repeat 1 61 0 5 1285 22 0 0 0 chrX 91762113 91762135 -74888161 + AT_rich Low_complexity Low_complexity 1 22 0 5 1285 337 310 63 0 chrX 91762176 91762334 -74887962 + L1M2 LINE L1 5639 5806 -506 5 1285 378 295 196 14 chrX 91762356 91762713 -74887583 + L1MD LINE L1 2749 3170 -2976 5 1285 1427 204 16 47 chrX 91763115 91763182 -74887114 + L1_Mur3 LINE L1 897 957 -6771 5 1285 2236 101 30 34 chrX 91763182 91763510 -74886786 - ORR1A2 LTR MaLR 0 327 1 5 1285 1427 204 16 47 chrX 91763510 91763718 -74886578 + L1_Mur3 LINE L1 958 1163 -6565 5 1285 1038 112 0 0 chrX 91763718 91763878 -74886418 + (TTTC)n Simple_repeat Simple_repeat 1 160 0 5 1285 1114 75 0 0 chrX 91763878 91764012 -74886284 - B1_Mus2 SINE Alu -12 135 2 5 1285 1427 204 16 47 chrX 91764012 91764115 -74886181 + L1_Mur3 LINE L1 1164 1264 -6464 5 1285 981 52 0 192 chrX 91764116 91764283 -74886013 + B1_Mus1 SINE Alu 5 139 -9 5 1285 246 105 0 0 chrX 91764284 91764322 -74885974 + (CGAA)n Simple_repeat Simple_repeat 3 40 0 5 1285 1175 102 6 0 chrX 91764322 91764498 -74885798 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 5 1285 594 75 0 0 chrX 91764498 91764578 -74885718 + (GAAA)n Simple_repeat Simple_repeat 1 80 0 5 1285 1103 134 5 26 chrX 91765007 91765221 -74885075 + L1_Mur3 LINE L1 1257 1465 -4412 5 1285 832 219 11 16 chrX 91765217 91765403 -74884893 + Lx5 LINE L1 5864 6048 -1412 5 1285 2257 254 17 34 chrX 91765900 91766892 -74883404 + Lx5 LINE L1 6146 7032 -18 5 1285 55 72 0 0 chrX 91766999 91767110 -74883186 + AT_rich Low_complexity Low_complexity 1 111 0 5 1285 530 296 76 8 chrX 91767203 91767452 -74882844 + L1MD LINE L1 3412 3677 -2469 6 1285 531 247 41 62 chrX 91767422 91767616 -74882680 + L1MA9 LINE L1 4054 4243 -1897 6 1285 315 49 0 0 chrX 91767616 91767657 -74882639 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1285 289 295 0 13 chrX 91767719 91767798 -74882498 + ID_B1 SINE B4 145 222 -2 6 1285 1514 135 0 9 chrX 91767846 91768077 -74882219 - MTC LTR MaLR 0 421 193 6 1285 678 180 169 34 chrX 91768077 91768255 -74882041 - Lx5 LINE L1 -23 7027 6826 6 1285 1200 103 32 26 chrX 91768280 91768470 -74881826 - MTC LTR MaLR -214 193 3 6 1285 690 256 153 95 chrX 91768816 91769088 -74881208 + L1MA9 LINE L1 4561 4826 -1314 6 1285 240 350 0 24 chrX 91769088 91769170 -74881126 + ID4_ SINE ID 2 81 -2 6 1285 690 261 143 69 chrX 91769170 91769977 -74880319 + L1MA9 LINE L1 4827 5833 -350 6 1285 760 291 30 5 chrX 91770110 91770310 -74879986 - Lx8 LINE L1 -132 7341 7137 6 1285 1971 256 23 19 chrX 91770331 91770813 -74879483 + Lx8 LINE L1 6535 7018 -455 6 1285 1029 63 87 0 chrX 91770814 91770940 -74879356 + B1_Mus2 SINE Alu 2 138 -9 6 1285 306 0 0 0 chrX 91770940 91770974 -74879322 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 6 1285 314 356 0 0 chrX 91771086 91771204 -74879092 + RodERV21-int LTR ERV1 4401 4518 -473 6 1285 2376 91 70 0 chrX 91771204 91771533 -74878763 + Lx3A LINE L1 6623 6974 -7 6 1285 25 0 0 0 chrX 91771534 91771559 -74878737 + AT_rich Low_complexity Low_complexity 1 25 0 6 1285 245 212 0 12 chrX 91771961 91772042 -74878254 + RMER17C LTR ERVK 177 256 -154 6 1285 209 184 0 0 chrX 91772115 91772153 -74878143 + CT-rich Low_complexity Low_complexity 2 39 0 6 1285 497 230 143 23 chrX 91772562 91772837 -74877459 + L1MD LINE L1 4311 4625 -1521 6 1285 255 148 47 47 chrX 91772866 91772930 -74877366 - L1M2 LINE L1 -739 5552 5489 6 1285 330 26 0 0 chrX 91772986 91773025 -74877271 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 1285 776 214 0 14 chrX 91773141 91773283 -74877013 - B1_Mur2 SINE Alu 0 149 10 6 1285 576 0 0 0 chrX 91773293 91773357 -74876939 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 6 1285 1185 90 0 0 chrX 91773357 91773513 -74876783 - B2_Mm2 SINE B2 -38 157 2 6 1285 3848 266 54 12 chrX 91773565 91774583 -74875713 - Lx8 LINE L1 -216 7257 6197 6 1285 1192 221 167 11 chrX 91774584 91774902 -74875394 + L1MA9 LINE L1 5882 6234 -78 6 1285 396 0 0 0 chrX 91774902 91774946 -74875350 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 1285 1192 221 167 11 chrX 91774946 91774998 -74875298 + L1MA9 LINE L1 6235 6309 -3 6 1285 226 284 45 11 chrX 91775095 91775184 -74875112 + L1MA5 LINE L1 6209 6300 0 6 1285 411 21 0 0 chrX 91775270 91775318 -74874978 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 6 1285 1212 76 0 0 chrX 91775319 91775464 -74874832 - B1_Mus1 SINE Alu -3 145 1 6 1285 307 102 8 0 chrX 91775467 91775523 -74874773 - B1F1 SINE Alu -88 59 2 6 1285 1363 58 6 6 chrX 91775528 91775702 -74874594 - L1_Mus1 LINE L1 0 6567 6394 6 1285 249 215 156 58 chrX 91776042 91776158 -74874138 - MIR SINE MIR -110 166 35 6 1285 1159 76 131 23 chrX 91776187 91776362 -74873934 + B2_Mm2 SINE B2 2 195 0 6 1285 414 319 8 8 chrX 91776559 91776679 -74873617 - MLT1E1A LTR MaLR 0 680 561 6 1285 273 89 0 0 chrX 91776948 91776993 -74873303 + (TC)n Simple_repeat Simple_repeat 2 46 0 6 1285 770 180 206 33 chrX 91777485 91777669 -74872627 - B3 SINE B2 0 216 1 6 1285 191 61 30 0 chrX 91778520 91778553 -74871743 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 1285 1136 55 7 0 chrX 91778563 91778708 -74871588 - B1_Mus2 SINE Alu 0 147 2 6 1285 317 147 167 56 chrX 91778912 91779020 -74871276 - Lx9 LINE L1 -5 7639 7520 6 1285 1087 89 83 0 chrX 91779038 91779218 -74871078 - Lx2 LINE L1 -1 6996 6802 6 1285 682 209 6 42 chrX 91779223 91779388 -74870908 - Lx5 LINE L1 -5 7045 6887 6 1285 22 0 0 0 chrX 91779715 91779737 -74870559 + AT_rich Low_complexity Low_complexity 1 22 0 6 1285 4928 101 131 10 chrX 91779746 91780563 -74869733 - Lx3B LINE L1 -4 6969 6054 6 1285 249 342 60 7 chrX 91780886 91781036 -74869260 + MER117 DNA MER1_type 4 161 -36 6 1285 1055 226 70 29 chrX 91781621 91781962 -74868334 + L1MA9 LINE L1 5758 6112 -200 6 1285 670 289 139 0 chrX 91781993 91782187 -74868109 - B4 SINE B4 0 292 72 6 1285 239 0 0 31 chrX 91782364 91782396 -74867900 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1285 265 247 61 20 chrX 91788198 91788297 -74861999 + PB1D10 SINE Alu 15 117 0 6 1285 330 156 0 0 chrX 91789246 91789310 -74860986 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 1285 265 325 0 73 chrX 91789337 91789488 -74860808 + L2a LINE L2 3240 3426 0 6 1285 210 37 0 0 chrX 91790101 91790128 -74860168 + (TGGGGG)n Simple_repeat Simple_repeat 2 28 0 6 1285 465 211 48 19 chrX 91790359 91790496 -74859800 - B3A SINE B2 -16 200 58 6 1285 1082 269 72 0 chrX 91790539 91790899 -74859397 - L1MD LINE L1 -670 5689 5304 6 1285 402 320 86 0 chrX 91790926 91791054 -74859242 + B4A SINE B4 22 160 -132 6 1285 237 223 104 21 chrX 91791244 91791340 -74858956 - L1MD LINE L1 -855 5291 5186 6 1285 195 42 0 0 chrX 91791354 91791378 -74858918 + (TATG)n Simple_repeat Simple_repeat 1 24 0 6 1285 593 255 64 0 chrX 91791380 91791521 -74858775 - B3 SINE B2 -66 150 1 6 1285 951 128 206 6 chrX 91791567 91791747 -74858549 - B3 SINE B2 0 216 1 6 1285 198 103 0 0 chrX 91791754 91791783 -74858513 + (TCTCC)n Simple_repeat Simple_repeat 2 30 0 6 1285 678 190 7 53 chrX 91791790 91791940 -74858356 - B1_Mur3 SINE Alu -6 143 1 6 1285 603 0 0 0 chrX 91791942 91792009 -74858287 + (TTCTC)n Simple_repeat Simple_repeat 4 70 0 6 1285 1012 110 51 11 chrX 91792027 91792202 -74858094 - Lx3A LINE L1 -2 6979 6798 6 1285 21 0 0 0 chrX 91792223 91792244 -74858052 + AT_rich Low_complexity Low_complexity 1 21 0 6 1285 328 318 0 18 chrX 91793170 91793279 -74857017 + PB1D10 SINE Alu 10 116 -1 6 1285 1147 250 75 26 chrX 91793493 91793842 -74856454 - ORR1D2 LTR MaLR 0 370 5 6 1285 540 284 172 15 chrX 91793962 91794492 -74855804 - L1MD LINE L1 -1208 4938 4326 6 1285 195 184 0 0 chrX 91794492 91794530 -74855766 + (TA)n Simple_repeat Simple_repeat 1 38 0 6 1285 360 0 0 0 chrX 91794588 91794628 -74855668 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 6 1285 791 203 0 20 chrX 91794633 91794779 -74855517 - B1_Mur4 SINE Alu -7 143 1 6 1285 4225 259 91 99 chrX 91794903 91795048 -74855248 - Lx7 LINE L1 -39 7657 7493 6 1285 261 0 0 0 chrX 91795048 91795077 -74855219 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 6 1285 4225 259 91 99 chrX 91795077 91795449 -74854847 - Lx7 LINE L1 -204 7492 7120 6 1285 279 0 0 0 chrX 91795449 91795480 -74854816 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1285 4225 259 91 99 chrX 91795480 91797050 -74853246 - Lx7 LINE L1 -577 7119 5587 6 1285 1856 198 84 5 chrX 91797288 91797715 -74852581 - MT2A LTR ERVL -72 461 1 6 1285 860 241 77 0 chrX 91799784 91799812 -74850484 - B3 SINE B2 -6 210 170 6 1285 195 100 0 0 chrX 91799812 91799842 -74850454 + (CATG)n Simple_repeat Simple_repeat 3 32 0 6 1285 860 241 77 0 chrX 91799842 91800008 -74850288 - B3 SINE B2 -47 169 2 6 1285 357 62 0 0 chrX 91800110 91800158 -74850138 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 6 1285 624 97 11 0 chrX 91800158 91800251 -74850045 - B1_Mus2 SINE Alu -9 138 45 6 1285 1967 34 4 0 chrX 91800251 91800485 -74849811 + L1Md_F2 LINE L1 6338 6572 -10 6 1285 387 0 0 0 chrX 91800556 91800599 -74849697 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 6 1285 1084 79 7 0 chrX 91800601 91800741 -74849555 - B1_Mus1 SINE Alu -6 142 2 6 1285 4754 194 35 16 chrX 91801125 91802006 -74848290 + Lx5 LINE L1 6148 7045 -5 6 1285 888 227 68 8 chrX 91802164 91802399 -74847897 + Lx4B LINE L1 6806 7054 -4 6 1285 614 262 91 10 chrX 91804126 91804323 -74845973 - MT2A LTR ERVL 0 533 321 6 1285 3693 259 48 12 chrX 91804373 91805559 -74844737 - L1_Mur3 LINE L1 -2627 3253 2025 6 1285 256 123 108 0 chrX 91805556 91805621 -74844675 + Lx9 LINE L1 7572 7643 -1 6 1285 2850 87 161 2 chrX 91805798 91806258 -74844038 - RMER16 LTR ERVK 0 533 1 6 1285 1381 79 10 16 chrX 91806345 91806537 -74843759 + B2_Mm1t SINE B2 1 191 -2 6 1285 2055 119 42 36 chrX 91806826 91807183 -74843113 - RLTR15 LTR ERVK 0 359 1 6 1285 578 71 12 0 chrX 91807514 91807598 -74842698 + (GA)n Simple_repeat Simple_repeat 2 86 0 6 1285 513 0 0 0 chrX 91807598 91807655 -74842641 + (GGAA)n Simple_repeat Simple_repeat 1 57 0 6 1285 208 191 0 45 chrX 91807785 91807829 -74842467 + polypyrimidine Low_complexity Low_complexity 2 43 0 6 1285 751 159 0 0 chrX 91807853 91807979 -74842317 + Lx5 LINE L1 6421 6546 -504 6 1285 237 257 135 0 chrX 91808298 91808372 -74841924 + MER77 LTR ERVL 509 592 -15 6 1285 740 293 113 16 chrX 91808612 91809161 -74841135 - Lx9 LINE L1 -7 7637 7036 6 1285 222 91 0 0 chrX 91809266 91809299 -74840997 + (TA)n Simple_repeat Simple_repeat 2 34 0 6 1285 443 298 71 6 chrX 91809996 91810165 -74840131 + Tigger7 DNA MER2_type 114 293 -2198 6 1285 6426 85 20 9 chrX 91810355 91811247 -74839049 + Lx3A LINE L1 6071 6972 -9 6 1285 25 0 0 0 chrX 91811248 91811273 -74839023 + AT_rich Low_complexity Low_complexity 1 25 0 6 1285 1724 239 113 11 chrX 91811470 91812036 -74838260 - L1_Mur3 LINE L1 -1330 4550 3927 6 1285 2520 249 75 41 chrX 91812033 91812351 -74837945 + Lx8 LINE L1 5034 5347 -533 6 1285 1172 171 41 14 chrX 91812351 91812570 -74837726 - URR1B DNA MER1_type 0 225 1 6 1285 2520 249 75 41 chrX 91812570 91812961 -74837335 + Lx8 LINE L1 5348 5792 -88 6 1285 659 203 34 27 chrX 91812961 91813108 -74837188 + B1_Mur1 SINE Alu 2 149 0 6 1285 2520 287 98 75 chrX 91813108 91813525 -74836771 + Lx8 LINE L1 5793 6188 -1285 6 1285 241 156 89 0 chrX 91813525 91813570 -74836726 + URR1B DNA MER1_type 53 101 -124 6 1285 729 65 0 0 chrX 91813579 91813671 -74836625 - L1_Mm LINE L1 -1758 4125 4034 6 1285 962 73 7 0 chrX 91813671 91813807 -74836489 + L1_Mus2 LINE L1 6429 6565 -1 7 1285 2881 329 53 30 chrX 91813815 91815063 -74835233 + Lx8 LINE L1 6191 7467 -6 6 1285 385 313 77 52 chrX 91815094 91815327 -74834969 + L1_Mur3 LINE L1 1882 2109 -3771 7 1285 1488 62 5 20 chrX 91815327 91815523 -74834773 - B2_Mm1a SINE B2 0 193 1 7 1285 385 283 94 44 chrX 91815523 91815810 -74834486 + L1_Mur3 LINE L1 2110 2410 -1504 7 1285 1059 286 70 16 chrX 91815807 91816382 -74833914 + L1M2 LINE L1 2965 3570 -2573 7 1285 205 191 0 0 chrX 91816383 91816425 -74833871 + T-rich Low_complexity Low_complexity 1 42 0 7 1285 8601 108 50 10 chrX 91816643 91818485 -74831811 - L1Md_A LINE L1 -2 6580 4644 7 1285 5830 101 28 5 chrX 91818485 91819312 -74830984 - Lx2A1 LINE L1 -1 7007 6162 7 1285 7816 198 108 22 chrX 91819312 91820329 -74829967 - L1Md_A LINE L1 -1240 4643 3533 7 1285 293 250 104 19 chrX 91820337 91820443 -74829853 - MTE2b-int LTR MaLR -924 656 542 7 1285 639 296 11 6 chrX 91820450 91820630 -74829666 - MTE2b-int LTR MaLR -1179 401 221 7 1285 26358 21 0 0 chrX 91820630 91823655 -74826641 + L1Md_T LINE L1 2562 5586 -297 7 1285 8201 53 0 0 chrX 91823655 91824651 -74825645 + L1Md_T LINE L1 5587 6582 0 7 1285 1148 242 108 6 chrX 91824887 91825248 -74825048 - MTD LTR MaLR 0 419 22 7 1285 591 313 80 5 chrX 91825258 91825470 -74824826 - MTE2b-int LTR MaLR -1350 230 3 7 1285 1245 236 65 21 chrX 91825475 91825813 -74824483 - MTE2b LTR MaLR -4 375 23 7 1285 226 349 0 0 chrX 91825827 91825933 -74824363 + MLT1-int LTR MaLR 54 159 -1212 7 1285 341 340 14 0 chrX 91826048 91826192 -74824104 - MLT1D-int LTR MaLR -1172 199 54 7 1285 246 175 0 0 chrX 91827121 91827161 -74823135 + Lx6 LINE L1 6811 6850 -610 7 1285 2442 218 32 10 chrX 91827256 91827765 -74822531 + Lx6 LINE L1 6558 7433 -27 7 1285 359 331 105 42 chrX 91827940 91828246 -74822050 - MLT1D LTR MaLR -1 504 180 7 1285 26 0 0 0 chrX 91828694 91828720 -74821576 + AT_rich Low_complexity Low_complexity 1 26 0 7 1285 232 202 114 0 chrX 91829342 91829421 -74820875 - Charlie1b DNA MER1_type -42 481 394 7 1285 12343 157 68 9 chrX 91830691 91833327 -74816969 - Lx5 LINE L1 -1107 5943 3104 7 1285 5426 90 36 1 chrX 91833328 91834881 -74815415 + L1Md_F2 LINE L1 382 1991 -3892 7 1285 6815 62 1 2 chrX 91834906 91835833 -74814463 + L1Md_F2 LINE L1 4661 5586 -297 7 1285 7516 56 8 14 chrX 91835833 91836823 -74813473 + L1Md_F2 LINE L1 5587 6570 -12 7 1285 5742 210 99 3 chrX 91836824 91838417 -74811879 - MusHAL1 LINE L1 -795 1917 172 7 1285 1592 236 196 51 chrX 91838419 91839025 -74811271 - RMER19B LTR ERVK -208 694 1 7 1285 503 273 32 71 chrX 91839473 91839826 -74810470 + L1MA4 LINE L1 5677 6024 -132 7 1285 1278 80 40 6 chrX 91839895 91840072 -74810224 + B2_Mm2 SINE B2 1 183 -12 7 1285 32 0 0 23 chrX 91840122 91840139 -74810157 + AT_rich Low_complexity Low_complexity 1 17 0 7 1285 1218 21 0 14 chrX 91840139 91840287 -74810009 + B1_Mus2 SINE Alu 2 147 0 7 1285 32 0 0 23 chrX 91840287 91840312 -74809984 + AT_rich Low_complexity Low_complexity 1 25 0 7 1285 352 206 38 0 chrX 91840560 91840648 -74809648 - Lx5 LINE L1 -3459 2388 2289 7 1285 609 245 12 6 chrX 91840662 91840826 -74809470 - Lx6 LINE L1 -26 7434 7270 7 1285 293 256 135 32 chrX 91840879 91841161 -74809135 + L1MEc LINE L1 1799 2109 -4291 7 1285 1315 73 45 0 chrX 91841164 91841343 -74808953 - B2_Mm1t SINE B2 -6 187 1 7 1285 423 305 21 0 chrX 91841403 91841544 -74808752 - Lx7 LINE L1 -1286 6410 6267 7 1285 967 270 74 28 chrX 91841531 91841923 -74808373 + Lx7 LINE L1 5835 6244 -1452 7 1285 749 282 101 8 chrX 91841933 91842161 -74808135 - L1_Mur1 LINE L1 -307 5579 5323 7 1285 405 0 0 0 chrX 91842161 91842206 -74808090 + (TA)n Simple_repeat Simple_repeat 1 45 0 7 1285 749 282 101 8 chrX 91842206 91842335 -74807961 - L1_Mur1 LINE L1 -564 5322 5190 7 1285 5343 212 55 21 chrX 91842430 91843675 -74806621 + Lx6 LINE L1 6004 7291 -169 7 1285 228 35 0 0 chrX 91843678 91843707 -74806589 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 7 1285 296 275 133 0 chrX 91843750 91843870 -74806426 + Lx7 LINE L1 7193 7328 -368 7 1285 252 0 0 0 chrX 91843884 91843912 -74806384 + (TC)n Simple_repeat Simple_repeat 1 28 0 7 1285 38 0 0 0 chrX 91844060 91844098 -74806198 + AT_rich Low_complexity Low_complexity 1 38 0 7 1285 196 30 29 29 chrX 91844147 91844181 -74806115 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 7 1285 1086 76 0 27 chrX 91844181 91844329 -74805967 - B1_Mus1 SINE Alu -3 145 2 7 1285 298 253 101 0 chrX 91845380 91845538 -74804758 - L1_Mur3 LINE L1 -2580 3300 3127 7 1285 353 21 0 0 chrX 91845543 91845590 -74804706 - L1_Mus2 LINE L1 0 6566 6520 7 1285 3184 65 0 0 chrX 91845590 91846008 -74804288 - L1_Mus1 LINE L1 -178 6389 5972 7 1285 1135 200 17 42 chrX 91846150 91846287 -74804009 + ORR1D2 LTR MaLR 136 268 -102 7 1285 780 11 0 0 chrX 91846287 91846376 -74803920 + (GAA)n Simple_repeat Simple_repeat 1 89 0 7 1285 1135 200 17 42 chrX 91846376 91846478 -74803818 + ORR1D2 LTR MaLR 269 369 -1 7 1285 369 287 0 0 chrX 91846532 91846640 -74803656 + L1M2 LINE L1 4788 4895 -1248 7 1285 303 309 76 35 chrX 91846664 91846835 -74803461 + L1M2 LINE L1 4454 4631 -1512 7 1285 530 92 0 0 chrX 91846840 91846916 -74803380 - L1_Mus4 LINE L1 -605 6031 5956 7 1285 7530 60 11 2 chrX 91846923 91848425 -74801871 - L1_Mus1 LINE L1 0 6567 5049 7 1285 580 276 65 19 chrX 91848425 91848687 -74801609 + Lx9 LINE L1 4856 5129 -751 7 1285 1176 55 7 0 chrX 91848690 91848835 -74801461 + B1_Mm SINE Alu 2 147 0 7 1285 912 84 37 116 chrX 91848902 91849167 -74801129 + L1_Mus2 LINE L1 6399 6632 -6 7 1285 586 363 6 0 chrX 91849227 91849398 -74800898 + B3A SINE B2 2 173 -25 7 1285 715 279 96 108 chrX 91849433 91849763 -74800533 + Lx9 LINE L1 5247 5575 -305 7 1285 571 283 32 32 chrX 91849763 91849953 -74800343 + B3A SINE B2 4 193 -5 7 1285 715 288 112 83 chrX 91849953 91850510 -74799786 + Lx9 LINE L1 5576 6150 -1323 7 1285 3961 116 9 9 chrX 91850693 91851365 -74798931 - L1_Mm LINE L1 -2111 3772 3101 7 1285 291 253 146 10 chrX 91851399 91851495 -74798801 - B1_Mur1 SINE Alu -9 140 32 7 1285 496 187 73 18 chrX 91851535 91851644 -74798652 + PB1 SINE Alu 13 127 0 7 1285 212 0 36 0 chrX 91851647 91851675 -74798621 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7 1285 243 91 0 0 chrX 91852570 91852603 -74797693 - B3 SINE B2 -175 41 9 7 1285 402 253 0 71 chrX 91852607 91852705 -74797591 - B4 SINE B4 -200 92 2 7 1285 255 239 39 98 chrX 91852708 91852810 -74797486 - PB1D10 SINE Alu 0 117 22 7 1285 696 239 23 57 chrX 91852734 91852911 -74797385 - ID_B1 SINE B4 -52 172 2 7 1285 675 141 172 0 chrX 91854101 91854229 -74796067 + B1_Mur4 SINE Alu 1 150 0 7 1285 584 128 23 31 chrX 91854824 91854953 -74795343 + C-rich Low_complexity Low_complexity 3 130 0 7 1285 351 0 0 0 chrX 91855153 91855192 -74795104 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1285 1025 200 50 25 chrX 91855244 91855444 -74794852 + B3 SINE B2 2 206 -10 7 1285 6287 65 6 39 chrX 91855472 91855702 -74794594 + L1_Mus4 LINE L1 5776 5994 -642 7 1285 1182 43 0 0 chrX 91855702 91855842 -74794454 + B1_Mm SINE Alu 1 140 -7 7 1285 6287 65 6 39 chrX 91855842 91856490 -74793806 + L1_Mus4 LINE L1 5995 6625 -11 7 1285 605 49 12 0 chrX 91856499 91856580 -74793716 + (GAAA)n Simple_repeat Simple_repeat 3 84 0 7 1285 791 268 21 16 chrX 91856612 91856805 -74793491 + B3A SINE B2 3 196 -2 7 1285 1272 322 37 4 chrX 91856817 91857278 -74793018 + Lx8 LINE L1 6191 6666 -807 7 1285 362 183 0 0 chrX 91857329 91857411 -74792885 + Lx9 LINE L1 7493 7574 -70 7 1285 741 49 16 24 chrX 91857411 91857536 -74792760 + L1_Mus3 LINE L1 6515 6638 0 7 1285 239 400 22 11 chrX 91857927 91858018 -74792278 - RSINE1 SINE B4 -67 98 7 7 1285 396 0 0 0 chrX 91858535 91858579 -74791717 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1285 665 247 104 15 chrX 91859134 91859393 -74790903 + L1_Rod LINE L1 901 1182 -6426 7 1285 328 222 97 65 chrX 91859384 91859538 -74790758 + L1_Rod LINE L1 1334 1492 -4355 7 1285 2557 247 50 61 chrX 91859532 91859751 -74790545 + L1_Rod LINE L1 3396 3646 -2201 7 1285 342 0 0 0 chrX 91859751 91859789 -74790507 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1285 2557 247 50 61 chrX 91859789 91860627 -74789669 + L1_Rod LINE L1 3647 4441 -1406 7 1285 806 201 0 12 chrX 91860753 91860914 -74789382 + Lx7 LINE L1 5590 5748 -1948 7 1285 423 0 0 0 chrX 91860914 91860961 -74789335 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 1285 180 200 0 0 chrX 91861317 91861362 -74788934 + GA-rich Low_complexity Low_complexity 1 45 0 7 1285 23 33 0 0 chrX 91861677 91861707 -74788589 + AT_rich Low_complexity Low_complexity 1 30 0 7 1285 206 174 0 21 chrX 91861713 91861760 -74788536 + T-rich Low_complexity Low_complexity 1 46 0 7 1285 958 331 49 60 chrX 91861854 91862255 -74788041 + Lx9 LINE L1 6711 7122 -522 7 1285 477 0 0 0 chrX 91862255 91862308 -74787988 + (TG)n Simple_repeat Simple_repeat 1 53 0 7 1285 958 331 49 60 chrX 91862308 91862622 -74787674 + Lx9 LINE L1 7123 7418 -226 7 1285 360 59 0 0 chrX 91862659 91862710 -74787586 + (TC)n Simple_repeat Simple_repeat 1 51 0 7 1285 337 150 0 36 chrX 91862859 91862942 -74787354 - Lx9 LINE L1 -22 7622 7543 7 1285 721 161 0 21 chrX 91862961 91863101 -74787195 - Lx9 LINE L1 -186 7458 7322 7 1285 922 211 11 0 chrX 91863100 91863285 -74787011 + Lx9 LINE L1 7134 7320 -324 7 1285 320 240 7 74 chrX 91863444 91863579 -74786717 - Lx9 LINE L1 -1 7643 7518 7 1285 704 202 24 6 chrX 91863645 91863809 -74786487 + Lx9 LINE L1 7252 7418 -226 7 1285 384 22 0 0 chrX 91863820 91863865 -74786431 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 1285 568 304 105 34 chrX 91863895 91864430 -74785866 + L1M5 LINE L1 4638 5210 -936 7 1285 330 290 96 65 chrX 91864453 91864531 -74785765 + L1M5 LINE L1 5266 5344 -820 7 1285 1134 68 7 26 chrX 91864531 91864682 -74785614 + B1_Mus1 SINE Alu 1 148 0 7 1285 330 290 96 65 chrX 91864682 91864802 -74785494 + L1M5 LINE L1 5345 5470 -694 7 1285 22 70 0 0 chrX 91864961 91865004 -74785292 + AT_rich Low_complexity Low_complexity 1 43 0 7 1285 23 54 0 0 chrX 91865074 91865111 -74785185 + AT_rich Low_complexity Low_complexity 1 37 0 7 1285 279 314 95 45 chrX 91865150 91865414 -74784882 + L1M5 LINE L1 5587 5863 -377 7 1285 745 243 109 46 chrX 91865442 91865835 -74784461 - Lx9 LINE L1 -2 7642 7225 7 1285 25 75 0 0 chrX 91865837 91865890 -74784406 + AT_rich Low_complexity Low_complexity 1 53 0 7 1285 6687 146 72 11 chrX 91867425 91868836 -74781460 - Lx4B LINE L1 -36 7022 5509 7 1285 191 309 106 67 chrX 91870351 91870455 -74779841 + MIRb SINE MIR 65 172 -96 7 1285 343 345 116 16 chrX 91870793 91871043 -74779253 + L1ME3A LINE L1 5887 6161 -12 7 1285 265 250 0 0 chrX 91871251 91871303 -74778993 + ID_B1 SINE B4 102 153 -71 7 1285 1030 79 14 0 chrX 91871338 91871477 -74778819 + B1_Mus1 SINE Alu 2 142 -6 7 1285 297 0 0 0 chrX 91871479 91871512 -74778784 + (TAA)n Simple_repeat Simple_repeat 2 34 0 7 1285 380 94 47 0 chrX 91871513 91871577 -74778719 + (GGAGAA)n Simple_repeat Simple_repeat 6 72 0 7 1285 1156 51 0 0 chrX 91871790 91871928 -74778368 + B1_Mus1 SINE Alu 5 142 -6 7 1285 195 80 39 39 chrX 91871934 91871986 -74778310 + A-rich Low_complexity Low_complexity 2 53 0 8 1285 1170 62 7 0 chrX 91872046 91872191 -74778105 - B1_Mus2 SINE Alu -1 146 1 8 1285 23 33 0 0 chrX 91872197 91872227 -74778069 + AT_rich Low_complexity Low_complexity 1 30 0 8 1285 387 36 0 0 chrX 91872357 91872412 -74777884 - L1Md_T LINE L1 0 6582 6528 8 1285 448 287 63 128 chrX 91872447 91872654 -74777642 - L1MD LINE L1 -1455 4691 4500 8 1285 333 336 9 0 chrX 91872654 91872767 -74777529 - PB1 SINE Alu -9 118 5 8 1285 448 287 63 128 chrX 91872767 91873050 -74777246 - L1MD LINE L1 -1647 4499 4233 8 1285 405 283 25 8 chrX 91873200 91873375 -74776921 - L1MC LINE L1 -2016 4130 3956 8 1285 577 318 109 29 chrX 91873559 91873899 -74776397 + RMER5 LTR ERV1 58 424 -110 8 1285 437 202 21 0 chrX 91873908 91874002 -74776294 + ORR1D1 LTR MaLR 10 105 -269 8 1285 360 316 39 22 chrX 91874051 91874281 -74776015 - L1MD LINE L1 -2512 3634 3401 8 1285 280 330 0 62 chrX 91874463 91874560 -74775736 - Tigger5 DNA MER2_type -2270 136 46 8 1285 3335 240 88 48 chrX 91874852 91876102 -74774194 - Lx6 LINE L1 -26 7434 5879 8 1285 852 223 159 24 chrX 91876101 91876179 -74774117 - Lx9 LINE L1 -48 7596 7511 8 1285 338 61 20 0 chrX 91876179 91876228 -74774068 + (TA)n Simple_repeat Simple_repeat 2 51 0 8 1285 852 223 159 24 chrX 91876228 91876439 -74773857 - Lx9 LINE L1 -134 7510 7268 8 1285 357 282 90 25 chrX 91876540 91876897 -74773399 + L1M4b LINE L1 1466 1845 -5489 8 1285 305 244 143 11 chrX 91876968 91877150 -74773146 + L1M4b LINE L1 2025 2230 -5104 8 1285 380 266 25 0 chrX 91877286 91877365 -74772931 - ID4_ SINE ID -1 82 2 8 1285 180 152 0 0 chrX 91877395 91877428 -74772868 + (TG)n Simple_repeat Simple_repeat 2 34 0 8 1285 347 284 42 15 chrX 91877483 91877736 -74772560 + L1M4b LINE L1 2080 2432 -4670 8 1285 219 281 20 29 chrX 91878090 91878188 -74772108 + B1F SINE Alu 24 149 0 8 1285 673 311 96 7 chrX 91878196 91878750 -74771546 + L1M4b LINE L1 3298 3900 -3106 8 1285 306 324 0 0 chrX 91878842 91878913 -74771383 - ID_B1 SINE B4 -71 153 83 8 1285 600 254 21 91 chrX 91879007 91879336 -74770960 - Lx9 LINE L1 0 7644 7339 8 1285 234 111 0 0 chrX 91879343 91879379 -74770917 - URR1B DNA MER1_type -14 211 176 8 1285 864 149 0 34 chrX 91879501 91879647 -74770649 - B1_Mus1 SINE Alu -7 141 1 8 1285 200 235 14 14 chrX 91879825 91879894 -74770402 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 8 1286 259 347 91 0 chrX 91885098 91885219 -74765077 - B1F SINE Alu -17 132 1 8 1286 431 275 27 40 chrX 91885560 91885708 -74764588 + B1F1 SINE Alu 1 146 -3 8 1286 24 32 0 0 chrX 91885753 91885784 -74764512 + AT_rich Low_complexity Low_complexity 1 31 0 8 1286 1059 70 0 59 chrX 91885920 91886073 -74764223 - B1_Mus1 SINE Alu 0 148 5 8 1286 2165 171 8 6 chrX 91886102 91886466 -74763830 + ORR1D2 LTR MaLR 3 367 -3 8 1286 1369 199 71 14 chrX 91886467 91886763 -74763533 + ORR1D2-int LTR MaLR 4 316 -1054 8 1286 765 224 142 19 chrX 91886952 91887262 -74763034 - L1M2 LINE L1 -1269 4874 4527 8 1286 3507 243 89 21 chrX 91887267 91888260 -74762036 + ORR1D2-int LTR MaLR 311 1370 0 8 1286 1718 220 11 27 chrX 91888260 91888634 -74761662 + ORR1D2 LTR MaLR 1 368 -2 8 1286 333 291 0 18 chrX 91888790 91888902 -74761394 - Lx8 LINE L1 -2 7471 7362 8 1286 3322 127 75 25 chrX 91889195 91889752 -74760544 + RMER4B LTR ERVK 1 585 0 8 1286 366 306 149 8 chrX 91889916 91890094 -74760202 + ORR1D-int LTR MaLR 812 1110 -470 8 1286 1822 160 35 6 chrX 91890107 91890453 -74759843 + Lx3C LINE L1 6617 6972 -4 8 1286 4791 128 52 10 chrX 91890526 91891309 -74758987 + Lx2B LINE L1 6185 7000 0 8 1286 37 69 0 0 chrX 91891512 91891584 -74758712 + AT_rich Low_complexity Low_complexity 1 72 0 8 1286 362 226 157 0 chrX 91892223 91892338 -74757958 - B4A SINE B4 -54 238 106 8 1286 42 0 0 0 chrX 91893006 91893048 -74757248 + AT_rich Low_complexity Low_complexity 1 42 0 8 1286 436 318 38 80 chrX 91893201 91893500 -74756796 - B4A SINE B4 0 292 3 8 1286 416 271 77 143 chrX 91893730 91894169 -74756127 - RMER21B LTR ERV1 -344 498 89 8 1286 2158 154 107 14 chrX 91894169 91894598 -74755698 + Lx2B LINE L1 6514 6982 -18 8 1286 442 153 0 45 chrX 91894599 91894688 -74755608 - RMER21B LTR ERV1 -757 85 1 8 1286 238 279 0 14 chrX 91894844 91894913 -74755383 + RMER21B LTR ERV1 108 175 -667 8 1286 479 246 131 46 chrX 91895006 91895181 -74755115 + RMER21B LTR ERV1 378 567 -275 8 1286 183 320 24 49 chrX 91895713 91895795 -74754501 + MIRb SINE MIR 95 174 -94 8 1286 3355 181 26 67 chrX 91896044 91896512 -74753784 + RMER1C Other Other 686 1128 -214 8 1286 838 95 14 7 chrX 91896512 91896650 -74753646 - L1_Mus3 LINE L1 0 6638 6500 8 1286 3355 181 26 67 chrX 91896650 91896863 -74753433 + RMER1C Other Other 1129 1339 -3 8 1286 321 269 81 44 chrX 91897048 91897184 -74753112 + B1F SINE Alu 1 141 -8 8 1286 271 206 48 0 chrX 91897196 91897259 -74753037 + ID4_ SINE ID 2 67 -16 8 1286 21 0 0 0 chrX 91897612 91897633 -74752663 + AT_rich Low_complexity Low_complexity 1 21 0 8 1286 5365 67 0 6 chrX 91898117 91898794 -74751502 - L1_Mus1 LINE L1 0 6567 5895 8 1286 246 208 168 32 chrX 91899024 91899119 -74751177 + PB1D7 SINE Alu 21 111 -9 8 1286 313 161 16 0 chrX 91900116 91900178 -74750118 - MTD LTR MaLR -355 64 2 8 1286 508 211 44 50 chrX 91900223 91900383 -74749913 - MTD-int LTR MaLR 0 1258 1100 8 1286 570 51 0 0 chrX 91900840 91900918 -74749378 + (CA)n Simple_repeat Simple_repeat 2 79 0 8 1286 901 214 97 0 chrX 91900925 91901121 -74749175 + B3 SINE B2 1 215 -1 8 1286 2042 234 128 53 chrX 91901149 91901811 -74748485 - MTD-int LTR MaLR -151 1107 396 8 1286 657 0 0 0 chrX 91901811 91901884 -74748412 + (TCTA)n Simple_repeat Simple_repeat 1 73 0 8 1286 3971 141 14 42 chrX 91901923 91902634 -74747662 - Lx4B LINE L1 -323 6735 6045 8 1286 541 152 48 0 chrX 91902636 91902741 -74747555 - MTD-int LTR MaLR -870 388 279 8 1286 1370 91 37 0 chrX 91902758 91902945 -74747351 + B2_Mm2 SINE B2 1 194 -1 8 1286 444 278 0 0 chrX 91903661 91903758 -74746538 + PB1D10 SINE Alu 8 104 -13 8 1286 1179 278 121 80 chrX 91904337 91904743 -74745553 + L1_Mur3 LINE L1 1696 2164 -3716 8 1286 1267 27 7 0 chrX 91904743 91904890 -74745406 + B1_Mus1 SINE Alu 1 148 0 8 1286 1179 278 121 80 chrX 91904890 91905370 -74744926 + L1_Mur3 LINE L1 2165 2618 -3262 8 1286 523 102 112 0 chrX 91905374 91905472 -74744824 - ORR1D-int LTR MaLR -85 1285 1177 8 1286 728 228 17 6 chrX 91905653 91905825 -74744471 - Lx5 LINE L1 -1 7049 6876 8 1286 254 83 0 0 chrX 91905857 91905893 -74744403 - U2 snRNA snRNA -152 36 1 8 1286 636 144 107 57 chrX 91906436 91906576 -74743720 - B1_Mus1 SINE Alu -1 147 1 8 1286 404 237 39 18 chrX 91907054 91907183 -74743113 + L1_Mur3 LINE L1 3637 3782 -2361 8 1286 1328 121 15 15 chrX 91907199 91907401 -74742895 + ETnERV-int LTR ERVK 2848 3049 -265 8 1286 531 277 141 23 chrX 91907401 91907700 -74742596 + L1_Rod LINE L1 3688 4021 -1826 8 1286 1312 312 33 50 chrX 91907700 91908367 -74741929 + Lx9 LINE L1 6750 7405 -239 8 1286 270 0 0 0 chrX 91908394 91908424 -74741872 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 1286 23 78 0 0 chrX 91910555 91910606 -74739690 + AT_rich Low_complexity Low_complexity 1 51 0 8 1286 2316 15 86 0 chrX 91910856 91911125 -74739171 + RLTR10B LTR ERVK 1 292 0 8 1286 614 266 96 46 chrX 91911432 91911692 -74738604 + RMER5 LTR ERV1 21 293 -241 8 1286 1784 161 57 23 chrX 91911700 91912089 -74738207 + L1_Mur3 LINE L1 2791 3192 -2688 8 1286 7554 88 27 2 chrX 91912089 91913228 -74737068 + L1_Mus4 LINE L1 5472 6636 0 8 1286 6915 147 5 14 chrX 91913225 91914346 -74735950 + L1_Mur3 LINE L1 3178 4289 -1591 8 1286 248 0 31 0 chrX 91914346 91914378 -74735918 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 8 1286 6915 147 5 14 chrX 91914378 91914434 -74735862 + L1_Mur3 LINE L1 4290 4345 -1535 8 1286 537 271 87 45 chrX 91914446 91914732 -74735564 - RLTR15 LTR ERVK -16 343 46 8 1286 4460 163 81 35 chrX 91914734 91915628 -74734668 - MYSERV6-int LTR ERVK -17 8942 8008 8 1286 210 191 0 0 chrX 91915914 91915956 -74734340 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 8 1286 5410 42 5 0 chrX 91918482 91919122 -74731174 - L1_Mus1 LINE L1 0 6567 5925 8 1286 2081 63 0 0 chrX 91919122 91919375 -74730921 + L1_Mm LINE L1 5458 5710 -173 8 1286 210 37 0 0 chrX 91919509 91919536 -74730760 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 8 1286 367 303 43 16 chrX 91919536 91919762 -74730534 - MYSERV6-int LTR ERVK -4735 4224 3916 8 1286 2938 92 143 4 chrX 91919813 91920280 -74730016 - Lx LINE L1 -2 6652 6121 8 1286 1019 49 32 95 chrX 91920300 91920458 -74729838 - B1_Mus1 SINE Alu 0 148 1 8 1286 545 226 7 49 chrX 91920888 91921032 -74729264 - RodERV21-int LTR ERV1 -3844 1147 1010 8 1286 342 311 25 44 chrX 91921053 91921211 -74729085 - RLTR42-int LTR ERVK -3727 1795 1641 8 1286 721 210 99 94 chrX 91921324 91921646 -74728650 - RLTR42-int LTR ERVK -4192 1330 1104 8 1286 3864 197 89 35 chrX 91921931 91922873 -74727423 - RodERV21-int LTR ERV1 -3996 995 3 8 1286 672 301 59 8 chrX 91923060 91923298 -74726998 + Lx8 LINE L1 6572 6821 -652 8 1286 554 268 110 31 chrX 91923310 91923537 -74726759 + Lx8 LINE L1 7227 7471 -2 8 1286 2981 63 201 7 chrX 91923593 91924022 -74726274 + RLTR1B LTR ERV1 1 512 0 8 1286 583 251 44 74 chrX 91924036 91924307 -74725989 + L1M2 LINE L1 5486 5748 -552 8 1286 366 332 38 51 chrX 91924307 91924542 -74725754 - HERVL40-int LTR ERVL -1528 4002 3771 8 1286 2754 174 48 46 chrX 91924542 91924869 -74725427 + RMER4B LTR ERVK 1 343 -242 8 1286 1689 31 0 0 chrX 91924869 91925061 -74725235 + B2_Mm1a SINE B2 2 193 0 8 1286 2754 174 48 46 chrX 91925061 91925317 -74724979 + RMER4B LTR ERVK 344 585 0 8 1286 185 0 0 39 chrX 91925987 91926013 -74724283 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 8 1286 789 172 71 127 chrX 91926196 91926463 -74723833 - RLTR28 LTR ERVL 0 524 273 8 1286 1294 144 27 0 chrX 91926496 91926718 -74723578 + Lx2 LINE L1 6770 6997 0 8 1286 1545 141 10 14 chrX 91926721 91927009 -74723287 - RLTR28 LTR ERVL -235 289 3 8 1286 5169 42 2 0 chrX 91927572 91928189 -74722107 + L1Md_F2 LINE L1 4969 5586 -297 8 1286 8428 33 9 0 chrX 91928189 91929168 -74721128 + L1Md_F2 LINE L1 5587 6574 -8 8 1286 440 288 70 6 chrX 91929865 91930036 -74720260 + B3A SINE B2 1 182 -16 8 1286 1005 101 44 0 chrX 91930497 91930656 -74719640 - L1_Mus3 LINE L1 0 6638 6473 8 1286 875 133 0 0 chrX 91930656 91930791 -74719505 + MusHAL1 LINE L1 1009 1143 -1569 8 1286 3027 33 2 124 chrX 91932118 91932562 -74717734 - RLTR10 LTR ERVK 0 390 1 8 1286 13031 62 64 59 chrX 91932564 91934538 -74715758 - RLTR10-int LTR ERVK -3 1984 1 8 1286 3027 33 2 124 chrX 91934538 91934982 -74715314 - RLTR10 LTR ERVK 0 390 1 8 1286 384 187 16 31 chrX 91935465 91935592 -74714704 + CT-rich Low_complexity Low_complexity 2 126 0 8 1286 192 77 0 0 chrX 91936214 91936240 -74714056 + (T)n Simple_repeat Simple_repeat 1 26 0 8 1286 1179 46 7 0 chrX 91936271 91936422 -74713874 - L1Md_A LINE L1 0 6582 6431 8 1286 1771 98 34 0 chrX 91936425 91936689 -74713607 + L1Md_A LINE L1 274 546 -6178 8 1286 378 0 0 0 chrX 91936990 91937032 -74713264 + (GA)n Simple_repeat Simple_repeat 1 42 0 9 1286 4167 201 26 42 chrX 91937097 91938138 -74712158 + L1_Mur3 LINE L1 3741 4764 -1116 9 1286 333 68 0 0 chrX 91938178 91938222 -74712074 + (CATA)n Simple_repeat Simple_repeat 2 45 0 9 1286 466 297 24 88 chrX 91938299 91938594 -74711702 - LTR55 LTR ERV -255 293 18 9 1286 746 67 0 40 chrX 91938730 91938855 -74711441 - L1Md_F2 LINE L1 -1 6581 6462 9 1286 36 0 0 0 chrX 91939031 91939067 -74711229 + AT_rich Low_complexity Low_complexity 1 36 0 9 1286 407 254 215 31 chrX 91939253 91939560 -74710736 + L1ME1 LINE L1 5665 6023 -219 9 1286 950 287 29 36 chrX 91940577 91941176 -74709120 + L1_Rod LINE L1 1008 1600 -4247 9 1286 1517 286 188 35 chrX 91941224 91942004 -74708292 + Lx9 LINE L1 5589 6511 -1133 9 1286 1649 214 57 5 chrX 91942004 91942376 -74707920 - ORR1B1 LTR MaLR -3 391 1 9 1286 6505 206 12 32 chrX 91942376 91943916 -74706380 - ORR1B1-int LTR MaLR 0 1509 1 9 1286 1982 185 23 0 chrX 91943917 91944301 -74705995 - ORR1B1 LTR MaLR -1 393 1 9 1286 1052 314 85 35 chrX 91944303 91944716 -74705580 + Lx9 LINE L1 6510 6964 -680 9 1286 3750 185 84 34 chrX 91944716 91945573 -74704723 - RMER19B LTR ERVK 0 902 3 9 1286 1052 314 85 35 chrX 91945573 91945733 -74704563 + Lx9 LINE L1 6965 7112 -532 9 1286 1963 194 35 9 chrX 91945828 91946260 -74704036 + RMER15 LTR ERVL 76 518 -57 9 1286 356 55 18 0 chrX 91946273 91946328 -74703968 + (TG)n Simple_repeat Simple_repeat 2 57 0 9 1286 505 291 44 6 chrX 91946384 91946543 -74703753 + Lx9 LINE L1 7138 7302 -342 9 1286 291 150 0 0 chrX 91946719 91946779 -74703517 + (TCCC)n Simple_repeat Simple_repeat 3 62 0 9 1286 287 189 18 0 chrX 91946831 91946942 -74703354 + (TCTG)n Simple_repeat Simple_repeat 2 114 0 9 1286 306 0 0 0 chrX 91947494 91947528 -74702768 + (CA)n Simple_repeat Simple_repeat 1 34 0 9 1286 456 19 0 0 chrX 91947528 91947580 -74702716 + (GA)n Simple_repeat Simple_repeat 2 54 0 9 1286 851 301 71 35 chrX 91947602 91948204 -74702092 - L1MA4A LINE L1 -377 5926 5303 9 1286 407 279 140 5 chrX 91948245 91948489 -74701807 - RLTR10A LTR ERVK 0 411 114 9 1286 1789 254 66 45 chrX 91948522 91950054 -74700242 - RLTR45-int LTR ERVK -204 7040 4193 9 1286 549 318 53 53 chrX 91950257 91950805 -74699491 - MMERVK10C-int LTR ERVK -3243 4338 3791 9 1286 1376 294 48 32 chrX 91950825 91951412 -74698884 - MMERVK10C-int LTR ERVK -3961 3620 2689 9 1286 2214 86 7 0 chrX 91951522 91951823 -74698473 - Lx6 LINE L1 -1785 5675 5379 9 1286 2771 116 5 18 chrX 91951833 91952272 -74698024 - RLTR1D LTR ERV1 -16 589 157 9 1286 6571 87 19 34 chrX 91952348 91953342 -74696954 - Lx6 LINE L1 -499 5387 4409 9 1286 8414 119 17 5 chrX 91953341 91953547 -74696749 + Lx3_Mus LINE L1 5701 5907 -1102 9 1286 576 0 0 0 chrX 91953547 91953611 -74696685 + (GAA)n Simple_repeat Simple_repeat 3 66 0 9 1286 8414 119 17 5 chrX 91953611 91954697 -74695599 + Lx3_Mus LINE L1 5908 7008 -1 9 1286 272 274 34 50 chrX 91954758 91954877 -74695419 - RSINE1 SINE B4 -4 161 45 9 1286 1172 286 46 28 chrX 91955189 91955650 -74694646 + RMER5 LTR ERV1 46 514 -20 9 1286 2320 130 45 0 chrX 91957134 91957511 -74692785 + Lx3A LINE L1 6585 6978 -3 9 1286 2772 96 7 31 chrX 91957575 91957994 -74692302 + L1_Mus3 LINE L1 6224 6632 -6 9 1286 1151 77 0 0 chrX 91958059 91958202 -74692094 + B1_Mus2 SINE Alu 3 145 -2 9 1286 230 115 19 0 chrX 91958203 91958255 -74692041 + (CAAA)n Simple_repeat Simple_repeat 1 53 0 9 1286 328 266 146 42 chrX 91960968 91961180 -74689116 - ORR1D2 LTR MaLR -6 364 123 9 1286 1263 244 0 7 chrX 91961203 91961489 -74688807 + MTC LTR MaLR 1 285 -136 9 1286 275 49 24 0 chrX 91961489 91961530 -74688766 + (TG)n Simple_repeat Simple_repeat 2 43 0 9 1286 2675 205 50 20 chrX 91961599 91962260 -74688036 - RMER19B LTR ERVK -13 889 209 9 1286 239 175 88 0 chrX 91962249 91962306 -74687990 - RMER19B LTR ERVK -840 62 1 9 1286 299 224 5 2 chrX 91962307 91962385 -74687911 + MTC LTR MaLR 343 421 0 9 1286 1396 236 58 49 chrX 91962408 91963443 -74686853 + MTC-int LTR MaLR 18 1200 -58 9 1286 1107 70 0 14 chrX 91963453 91963588 -74686708 + B1_Mus2 SINE Alu 1 135 -12 9 1286 447 19 0 0 chrX 91963588 91963640 -74686656 + (GAAA)n Simple_repeat Simple_repeat 2 53 0 9 1286 231 106 20 41 chrX 91963702 91963751 -74686545 + B2_Mm1t SINE B2 132 179 -14 9 1286 283 134 310 52 chrX 91963783 91963899 -74686397 + B2_Mm2 SINE B2 47 192 -3 9 1286 277 281 116 28 chrX 91963967 91964183 -74686113 + RLTR15 LTR ERVK 99 333 -26 9 1286 1095 160 149 16 chrX 91964356 91964598 -74685698 - Lx2B LINE L1 -3 6997 6724 9 1286 1952 227 56 18 chrX 91964598 91965101 -74685195 - RMER19B LTR ERVK -13 889 368 9 1286 4966 153 57 11 chrX 91965109 91966009 -74684287 + Lx2B LINE L1 6050 6990 -10 9 1286 283 242 0 16 chrX 91966021 91966084 -74684212 + Lx8 LINE L1 7110 7171 -302 9 1286 1759 194 53 10 chrX 91966494 91966895 -74683401 + Lx4A LINE L1 6639 7055 -3 9 1286 1212 41 7 0 chrX 91967276 91967422 -74682874 - B1_Mm SINE Alu 0 147 1 9 1286 1437 117 56 41 chrX 91969075 91969342 -74680954 + Lx LINE L1 6356 6626 -28 9 1286 222 37 0 0 chrX 91969342 91969369 -74680927 + (CA)n Simple_repeat Simple_repeat 2 28 0 9 1286 430 83 14 14 chrX 91969394 91969467 -74680829 + (TG)n Simple_repeat Simple_repeat 2 74 0 9 1286 687 130 0 0 chrX 91970263 91970386 -74679910 + (CGG)n Simple_repeat Simple_repeat 3 125 0 9 1286 288 0 0 0 chrX 91970604 91970636 -74679660 + (CGG)n Simple_repeat Simple_repeat 3 34 0 9 1286 307 19 0 103 chrX 91970799 91970857 -74679439 + (CCG)n Simple_repeat Simple_repeat 1 52 0 9 1286 54 68 0 0 chrX 91970919 91971022 -74679274 + GC_rich Low_complexity Low_complexity 1 103 0 9 1286 201 39 0 0 chrX 91972674 91972700 -74677596 + (TTG)n Simple_repeat Simple_repeat 2 27 0 9 1286 249 352 11 20 chrX 91972800 91972949 -74677347 + MIRb SINE MIR 40 185 -23 9 1286 271 231 53 59 chrX 91973282 91973434 -74676862 - L1MC5 LINE L1 -419 7542 7392 9 1286 744 191 33 3 chrX 91975842 91976039 -74674257 - B3 SINE B2 0 198 7 9 1286 269 301 68 0 chrX 91976209 91976282 -74674014 + ID2 SINE ID 4 81 -2 9 1286 22 56 0 0 chrX 91976770 91976806 -74673490 + AT_rich Low_complexity Low_complexity 1 36 0 9 1286 370 241 131 34 chrX 91977272 91977448 -74672848 + Charlie5 DNA MER1_type 6 198 -2426 9 1286 3740 147 143 66 chrX 91977573 91978410 -74671886 + RMER19B LTR ERVK 1 902 0 9 1286 326 284 125 0 chrX 91978517 91978605 -74671691 - PB1D10 SINE Alu -6 111 13 9 1286 335 253 126 6 chrX 91978653 91978834 -74671462 - Lx5 LINE L1 -18 7032 6833 9 1286 1041 226 30 44 chrX 91978834 91979195 -74671101 - RLTR15 LTR ERVK -3 356 1 9 1286 3569 237 87 32 chrX 91979233 91979394 -74670902 - L1_Mur3 LINE L1 -555 5325 5163 9 1286 321 0 0 0 chrX 91979394 91979439 -74670857 - L1Md_T LINE L1 0 6582 6538 9 1286 3569 237 87 32 chrX 91979439 91980479 -74669817 - L1_Mur3 LINE L1 -718 5162 4058 9 1286 205 250 0 0 chrX 91980485 91980525 -74669771 + polypyrimidine Low_complexity Low_complexity 1 40 0 9 1286 2194 155 24 48 chrX 91980525 91980946 -74669350 - RMER1A Other Other -16 1014 604 9 1286 587 213 208 9 chrX 91980949 91981185 -74669111 - L1_Mur3 LINE L1 -2486 3394 3109 9 1286 745 263 127 17 chrX 91981175 91981592 -74668704 - L1_Mur3 LINE L1 -3950 1930 1468 9 1286 632 288 27 58 chrX 91982426 91982614 -74667682 - B3A SINE B2 -16 182 1 9 1286 439 277 168 18 chrX 91982631 91982966 -74667330 - L1M2 LINE L1 -2372 3768 3377 9 1286 306 0 0 0 chrX 91983664 91983698 -74666598 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 1286 477 238 69 33 chrX 91983930 91984072 -74666224 - L1M2 LINE L1 -2537 3343 3192 9 1286 3034 64 10 8 chrX 91984072 91984467 -74665829 - MTA_Mm LTR MaLR 0 396 1 9 1286 477 220 68 34 chrX 91984467 91984662 -74665634 - L1M2 LINE L1 -2921 3222 2992 9 1286 665 187 80 28 chrX 91984689 91984865 -74665431 - B2_Mm2 SINE B2 -9 186 2 9 1286 675 173 175 131 chrX 91984872 91985078 -74665218 - B3 SINE B2 0 216 2 9 1286 813 76 8 0 chrX 91985140 91985258 -74665038 + B1_Mus1 SINE Alu 30 148 0 9 1286 25 31 0 0 chrX 91985315 91985347 -74664949 + AT_rich Low_complexity Low_complexity 1 32 0 9 1286 274 274 174 23 chrX 91985359 91985471 -74664825 - L1M2 LINE L1 -3321 2559 2425 9 1286 219 69 0 0 chrX 91985471 91985500 -74664796 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 9 1286 274 274 174 23 chrX 91985500 91985645 -74664651 - L1M2 LINE L1 -3456 2424 2264 9 1286 8320 77 1 0 chrX 91985639 91987458 -74662838 - L1_Mus1 LINE L1 0 6567 4746 9 1286 292 299 46 15 chrX 91987481 91987611 -74662685 - L1_Rod LINE L1 -3851 2295 2157 9 1286 432 243 29 10 chrX 91988484 91988588 -74661708 - MTE-int LTR MaLR -520 1060 955 9 1286 605 191 70 0 chrX 91988591 91988706 -74661590 + Lx6 LINE L1 7071 7193 -267 9 1286 1035 222 38 34 chrX 91988889 91989155 -74661141 + Lx6 LINE L1 7193 7459 -1 9 1286 361 295 33 53 chrX 91989274 91989575 -74660721 - RLTR15 LTR ERVK -20 339 45 9 1286 1546 123 14 127 chrX 91989666 91990028 -74660268 + ORR1A4 LTR MaLR 1 321 -8 9 1286 641 330 78 15 chrX 91990352 91990623 -74659673 + MTE-int LTR MaLR 362 649 -931 9 1286 508 316 14 44 chrX 91990749 91991005 -74659291 + Lx8 LINE L1 5642 5890 -1583 9 1286 1906 132 32 67 chrX 91991005 91991346 -74658950 + ORR1A4 LTR MaLR 1 329 0 9 1286 508 316 14 44 chrX 91991346 91991384 -74658912 + Lx8 LINE L1 5891 5927 -1546 9 1286 2205 198 150 72 chrX 91991622 91992189 -74658107 + RMER19C LTR ERVK 1 611 0 9 1286 1547 122 92 196 chrX 91992286 91992816 -74657480 - IAPLTR2_Mm LTR ERVK 0 475 1 9 1286 2621 179 85 4 chrX 91993805 91994311 -74655985 - Lx5 LINE L1 0 7050 6504 9 1286 2249 144 3 0 chrX 91994969 91995308 -74654988 + Lx5 LINE L1 6152 6491 -559 9 1286 974 290 83 36 chrX 91995432 91995786 -74654510 - L1MA9 LINE L1 -462 5850 5481 9 1286 246 32 0 0 chrX 91995786 91995817 -74654479 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 1286 974 269 108 87 chrX 91995817 91996125 -74654171 - L1MA9 LINE L1 -832 5480 5161 9 1286 23 0 0 0 chrX 91996139 91996162 -74654134 + AT_rich Low_complexity Low_complexity 1 23 0 9 1286 33 0 0 0 chrX 91996394 91996427 -74653869 + AT_rich Low_complexity Low_complexity 1 33 0 9 1286 1508 171 28 57 chrX 91996847 91997154 -74653142 - Lx7 LINE L1 0 7696 7403 9 1286 417 39 0 0 chrX 91997154 91997205 -74653091 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 1286 1508 171 28 57 chrX 91997205 91997250 -74653046 - Lx7 LINE L1 -294 7402 7354 9 1286 802 193 222 0 chrX 91997275 91997446 -74652850 + B3 SINE B2 2 210 -6 9 1286 1184 56 0 0 chrX 91997510 91997654 -74652642 + B1_Mm SINE Alu 1 144 -3 9 1286 1260 137 4 168 chrX 91997660 91997995 -74652301 + L1_Mm LINE L1 5099 5355 -528 9 1286 1526 229 29 9 chrX 91997995 91998335 -74651961 - Lx7 LINE L1 -361 7335 6989 9 1286 1707 205 128 8 chrX 91998362 91998751 -74651545 - Lx6 LINE L1 -182 7278 6843 9 1286 4031 161 70 77 chrX 91998751 91999657 -74650639 + RMER19B LTR ERVK 1 890 -12 9 1286 433 88 0 0 chrX 91999661 91999718 -74650578 - Lx7 LINE L1 -842 6854 6798 1 1286 1959 57 29 4 chrX 91999719 92000000 -74650296 + RMER17B LTR ERVK 1 288 -670 1 1286 4066 109 17 9 chrX 92000000 92000664 -74649632 + RMER17B LTR ERVK 290 958 0 1 1286 759 210 0 0 chrX 92000664 92000802 -74649494 - Lx7 LINE L1 -894 6802 6665 2 1286 1724 117 10 184 chrX 92000803 92001234 -74649062 + ORR1B1 LTR MaLR 1 386 -8 3 1286 2915 209 30 0 chrX 92001239 92001803 -74648493 - Lx7 LINE L1 -1029 6667 6087 2 1286 1012 272 130 5 chrX 92001821 92002260 -74648036 - L1MA5 LINE L1 -22 6278 5785 4 1286 265 278 118 62 chrX 92002304 92002592 -74647704 - L1ME3A LINE L1 -72 6101 5798 5 1286 309 339 104 30 chrX 92002654 92002855 -74647441 - L1ME3A LINE L1 -896 5250 5035 5 1286 25 0 0 0 chrX 92002949 92002974 -74647322 + AT_rich Low_complexity Low_complexity 1 25 0 6 1286 2473 157 93 6 chrX 92003189 92003703 -74646593 + RMER4B LTR ERVK 3 561 -24 7 1286 1200 42 0 0 chrX 92003705 92003849 -74646447 + B1_Mus2 SINE Alu 1 144 -3 8 1286 999 109 7 7 chrX 92004532 92004680 -74645616 + B1_Mus1 SINE Alu 1 148 0 9 1286 3951 157 113 68 chrX 92005133 92005989 -74644307 + RMER19B LTR ERVK 1 895 -7 1 1286 3259 186 41 17 chrX 92006280 92006981 -74643315 - RMER19A LTR ERVK -19 718 1 1 1286 304 290 66 57 chrX 92007335 92007653 -74642643 + L1M4c LINE L1 2108 2428 -3956 1 1286 1001 250 28 66 chrX 92007653 92007940 -74642356 + MTE2a LTR MaLR 1 276 -103 1 1286 646 241 74 121 chrX 92007955 92008403 -74641893 + L1M4c LINE L1 2421 2847 -3532 1 1286 597 284 133 13 chrX 92008468 92008925 -74641371 + L1M4c LINE L1 4111 4622 -1754 1 1286 1804 120 65 7 chrX 92009133 92009443 -74640853 + RMER4B LTR ERVK 1 328 -257 1 1286 4088 141 183 37 chrX 92009443 92009592 -74640704 - RMER19B LTR ERVK 0 902 763 1 1286 1184 68 0 0 chrX 92009592 92009740 -74640556 + B1_Mus1 SINE Alu 1 148 0 1 1286 4088 141 183 37 chrX 92009740 92010156 -74640140 - RMER19B LTR ERVK -140 762 249 1 1286 183 129 0 0 chrX 92010156 92010187 -74640109 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1286 4088 141 183 37 chrX 92010187 92010407 -74639889 - RMER19B LTR ERVK -654 248 3 1 1286 620 192 73 57 chrX 92010407 92010584 -74639712 + L1_Mur3 LINE L1 5340 5519 -361 1 1286 502 181 158 0 chrX 92010586 92010713 -74639583 + ORR1D1 LTR MaLR 1 147 -227 1 160 33133 70 12 1 chrX 92010728 92015849 -74634447 + L1Md_F2 LINE L1 406 5586 -297 2 1287 8373 38 1 0 chrX 92015849 92016830 -74633466 + L1Md_F2 LINE L1 5587 6568 -14 2 1287 3244 68 2 0 chrX 92016899 92017298 -74632998 - MTB LTR MaLR 0 400 1 2 1287 986 192 98 5 chrX 92019770 92019985 -74630311 - ORR1C2 LTR MaLR -3 381 147 2 1287 451 253 189 18 chrX 92020020 92020189 -74630107 - B3A SINE B2 0 198 1 2 1287 813 208 39 72 chrX 92020988 92021195 -74629101 - ORR1C2 LTR MaLR -179 205 6 2 1287 1873 269 174 26 chrX 92021229 92022363 -74627933 - Lx7 LINE L1 -328 7368 6068 2 1287 2037 187 44 15 chrX 92022405 92022946 -74627350 - RMER19B LTR ERVK -7 895 57 2 1287 663 113 0 0 chrX 92022948 92023054 -74627242 - RMER19B LTR ERVK -796 106 1 2 1287 2233 192 30 80 chrX 92023061 92023598 -74626698 + RMER19C LTR ERVK 102 611 0 2 1287 452 110 55 0 chrX 92023598 92023669 -74626627 - MT2B LTR ERVL -526 75 1 2 1287 645 268 30 71 chrX 92023831 92024168 -74626128 + L1_Mur3 LINE L1 296 618 -7094 2 1287 1045 163 58 22 chrX 92024168 92024394 -74625902 + RMER19C LTR ERVK 378 611 0 3 1287 693 171 0 0 chrX 92024394 92024511 -74625785 + MurERV4_19-int LTR ERVK 1 117 -5663 3 1287 2280 204 56 4 chrX 92025430 92025931 -74624365 + RLTR11A2 LTR ERVK 1 527 0 3 1287 1295 267 55 17 chrX 92025965 92026369 -74623927 + MTD LTR MaLR 1 419 0 3 1287 1780 142 189 9 chrX 92026662 92026996 -74623300 - ORR1B1 LTR MaLR 0 394 1 3 1287 8454 48 16 1 chrX 92027429 92028460 -74621836 - L1_Mus3 LINE L1 -6 6632 5587 3 1287 480 309 55 11 chrX 92028746 92028929 -74621367 + B3A SINE B2 7 197 -1 3 1287 194 62 31 0 chrX 92029046 92029078 -74621218 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1287 1142 78 0 0 chrX 92029097 92029239 -74621057 - B1_Mm SINE Alu -5 142 1 3 1287 250 276 16 41 chrX 92030086 92030207 -74620089 + RLTR40 LTR ERVK 122 239 -578 3 1287 260 257 25 130 chrX 92030719 92030880 -74619416 + Lx9 LINE L1 6142 6285 -1359 3 1287 447 221 0 28 chrX 92030893 92031000 -74619296 - RLTR16 LTR ERVK 0 505 402 4 1287 393 19 19 0 chrX 92031003 92031055 -74619241 + HAL1-3A_ME LINE L1 1976 2028 -830 4 1287 403 76 0 48 chrX 92031055 92031138 -74619158 + (CAGAGA)n Simple_repeat Simple_repeat 6 84 0 4 1287 1871 183 71 2 chrX 92031144 92031539 -74618757 - RLTR16 LTR ERVK -81 424 3 4 1287 3343 268 100 35 chrX 92031560 92032752 -74617544 + Lx9 LINE L1 6373 7641 -3 3 1287 358 290 53 40 chrX 92032808 92032836 -74617460 - B3A SINE B2 -8 190 166 4 1287 312 70 0 0 chrX 92032836 92032879 -74617417 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1287 419 235 25 43 chrX 92032879 92033010 -74617286 - B3 SINE B2 -33 165 37 4 1287 779 171 34 3 chrX 92033294 92033453 -74616843 + L1_Rod LINE L1 2341 2527 -3320 4 1287 4174 163 46 78 chrX 92033455 92034360 -74615936 + RMER19B LTR ERVK 25 900 -2 4 1287 1034 191 32 5 chrX 92034364 92034580 -74615716 + L1_Rod LINE L1 2525 2746 -3101 4 1287 1044 64 0 0 chrX 92034593 92034733 -74615563 - B1_Mm SINE Alu 0 147 8 4 1287 226 287 8 0 chrX 92034633 92034755 -74615541 - ORR1B1-int LTR MaLR -755 754 632 4 1287 648 276 95 30 chrX 92034755 92035017 -74615279 + L1_Rod LINE L1 2750 3028 -2819 4 1287 2468 114 62 10 chrX 92035714 92036130 -74614166 + Lx3B LINE L1 6533 6970 -3 4 1287 2336 206 122 6 chrX 92036271 92036813 -74613483 + Lx9 LINE L1 7040 7644 0 5 1287 32 26 0 0 chrX 92036813 92036852 -74613444 + AT_rich Low_complexity Low_complexity 1 39 0 5 1287 267 103 0 0 chrX 92037026 92037065 -74613231 + (T)n Simple_repeat Simple_repeat 1 39 0 5 1287 1175 75 0 0 chrX 92037065 92037212 -74613084 - B1_Mm SINE Alu 0 147 1 5 1287 191 298 23 23 chrX 92037493 92037579 -74612717 + MIRc SINE MIR 74 159 -109 5 1287 658 303 137 20 chrX 92037662 92037955 -74612341 + MTE2b LTR MaLR 1 327 -52 5 1287 612 27 0 0 chrX 92040013 92040087 -74610209 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 5 1287 269 316 11 0 chrX 92040636 92040731 -74609565 - MIRb SINE MIR -121 147 52 5 1287 201 39 0 0 chrX 92040836 92040862 -74609434 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 1287 54 68 0 0 chrX 92042514 92042617 -74607679 + GC_rich Low_complexity Low_complexity 1 103 0 5 1287 335 92 11 75 chrX 92042679 92042773 -74607523 + (CGG)n Simple_repeat Simple_repeat 1 88 0 6 1287 288 0 0 0 chrX 92042899 92042931 -74607365 + (CCG)n Simple_repeat Simple_repeat 3 34 0 6 1287 687 130 0 0 chrX 92043149 92043272 -74607024 + (CCG)n Simple_repeat Simple_repeat 3 125 0 6 1287 448 81 13 13 chrX 92044068 92044143 -74606153 + (CA)n Simple_repeat Simple_repeat 2 76 0 6 1287 222 37 0 0 chrX 92044168 92044195 -74606101 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 1287 1437 117 56 41 chrX 92044195 92044462 -74605834 - Lx LINE L1 -28 6626 6356 6 1287 1139 51 0 0 chrX 92046115 92046252 -74604044 + B1_Mm SINE Alu 1 137 -10 6 1287 233 0 62 0 chrX 92046252 92046284 -74604012 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1287 1770 187 56 13 chrX 92046659 92047060 -74603236 - Lx4A LINE L1 -3 7055 6639 6 1287 324 210 0 16 chrX 92047470 92047533 -74602763 - Lx8 LINE L1 -302 7171 7110 6 1287 4969 151 58 11 chrX 92047546 92048445 -74601851 - Lx2B LINE L1 -10 6990 6050 7 1287 2042 216 57 18 chrX 92048448 92048961 -74601335 + RMER19B LTR ERVK 357 889 -13 7 1287 1118 151 149 16 chrX 92048961 92049203 -74601093 + Lx2B LINE L1 6724 6997 -3 7 1287 276 281 116 28 chrX 92049376 92049592 -74600704 - RLTR15 LTR ERVK -26 333 99 7 1287 283 134 310 52 chrX 92049660 92049776 -74600520 - B2_Mm2 SINE B2 -3 192 47 7 1287 231 106 20 41 chrX 92049808 92049857 -74600439 - B2_Mm1t SINE B2 -14 179 132 7 1287 627 14 0 0 chrX 92049919 92049991 -74600305 + (TTTC)n Simple_repeat Simple_repeat 2 73 0 7 1287 1100 67 0 0 chrX 92049991 92050126 -74600170 - B1_Mus2 SINE Alu -12 135 1 7 1287 1396 237 54 50 chrX 92050136 92051171 -74599125 - MTC-int LTR MaLR -58 1200 18 7 1287 299 224 5 2 chrX 92051194 92051272 -74599024 - MTC LTR MaLR 0 421 343 7 1287 239 175 88 0 chrX 92051273 92051330 -74598966 + RMER19B LTR ERVK 1 62 -840 7 1287 2675 205 50 20 chrX 92051319 92051980 -74598316 + RMER19B LTR ERVK 209 889 -13 7 1287 275 49 24 0 chrX 92052049 92052090 -74598206 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 1287 1263 244 0 7 chrX 92052090 92052376 -74597920 - MTC LTR MaLR -136 285 1 7 1287 328 266 146 42 chrX 92052399 92052611 -74597685 + ORR1D2 LTR MaLR 123 364 -6 8 1287 230 115 19 0 chrX 92055324 92055376 -74594920 + (TTTG)n Simple_repeat Simple_repeat 1 53 0 8 1287 1151 77 0 0 chrX 92055377 92055520 -74594776 - B1_Mus2 SINE Alu -2 145 3 8 1287 2759 103 2 29 chrX 92055585 92056005 -74594291 - L1_Mus3 LINE L1 -6 6632 6224 8 1287 2320 130 45 0 chrX 92056069 92056446 -74593850 - Lx3A LINE L1 -3 6978 6585 8 1287 1172 286 46 28 chrX 92057930 92058391 -74591905 - RMER5 LTR ERV1 -20 514 46 8 1287 272 274 34 50 chrX 92058703 92058822 -74591474 + RSINE1 SINE B4 45 161 -4 8 1287 8414 119 17 5 chrX 92058883 92059969 -74590327 - Lx3_Mus LINE L1 0 7009 5909 8 1287 603 0 0 0 chrX 92059969 92060036 -74590260 + (TTC)n Simple_repeat Simple_repeat 3 69 0 8 1287 8414 119 17 5 chrX 92060036 92060242 -74590054 - Lx3_Mus LINE L1 -1101 5908 5702 8 1287 6522 88 19 36 chrX 92060241 92061237 -74589059 + L1_Mur1 LINE L1 4409 5387 -499 9 1287 2784 109 7 18 chrX 92061313 92061751 -74588545 + RLTR1D LTR ERV1 157 589 -16 9 1287 2204 83 7 0 chrX 92061761 92062050 -74588246 + L1_Mur1 LINE L1 5379 5669 -217 9 1287 276 100 0 0 chrX 92062798 92062838 -74587458 + (TAA)n Simple_repeat Simple_repeat 3 42 0 9 1287 324 0 0 0 chrX 92062940 92062976 -74587320 + (TA)n Simple_repeat Simple_repeat 2 37 0 9 1287 393 250 156 58 chrX 92063526 92063991 -74586305 + L1M3 LINE L1 3886 4422 -1721 9 1287 22 0 0 0 chrX 92064082 92064104 -74586192 + AT_rich Low_complexity Low_complexity 1 22 0 9 1287 1094 267 29 60 chrX 92064525 92064872 -74585424 - Lx6 LINE L1 -170 7290 6955 9 1287 416 262 20 33 chrX 92064877 92065027 -74585269 + Lx7 LINE L1 6105 6252 -1444 9 1287 28122 91 30 13 chrX 92065026 92070005 -74580291 - L1Md_F2 LINE L1 -14 6568 1500 9 1287 4948 103 35 8 chrX 92069987 92070511 -74579785 - L1Md_F2 LINE L1 -5394 1222 679 9 1287 3406 150 25 54 chrX 92070511 92071158 -74579138 - RLTR5_Mm LTR ERV1 0 628 1 9 1287 4948 172 54 35 chrX 92071158 92071602 -74578694 - L1Md_F2 LINE L1 -6010 714 242 9 1287 926 162 14 0 chrX 92071606 92071754 -74578542 + Lx6 LINE L1 6229 6378 -1082 1 1287 457 123 45 15 chrX 92071994 92072126 -74578170 + (CAGAGA)n Simple_repeat Simple_repeat 6 141 0 1 1287 822 299 92 61 chrX 92072151 92072888 -74577408 + L1MA4A LINE L1 4488 5247 -896 1 1287 444 224 155 46 chrX 92072955 92073194 -74577102 + RLTR10A LTR ERVK 147 411 0 1 1287 359 222 61 53 chrX 92073214 92073328 -74576968 + RLTR10-int LTR ERVK 319 433 -1554 1 1287 1324 303 42 29 chrX 92073643 92074238 -74576058 + MMERVK10C-int LTR ERVK 2689 3620 -3961 1 1287 301 230 11 11 chrX 92074236 92074336 -74575960 + MMERVK10C-int LTR ERVK 3791 3855 -3726 1 1287 520 284 43 30 chrX 92074396 92074776 -74575520 + IAP-d-int LTR ERVK 3544 3868 -2674 1 1287 1811 264 62 44 chrX 92074983 92076519 -74573777 + RLTR45-int LTR ERVK 6533 7040 -204 1 1287 396 221 20 11 chrX 92076548 92076660 -74573636 + RLTR10A LTR ERVK 114 247 -164 1 1287 870 288 86 51 chrX 92076833 92077436 -74572860 + L1MA4A LINE L1 5303 5926 -377 1 1287 414 0 0 0 chrX 92077449 92077495 -74572801 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 1287 306 0 0 0 chrX 92077495 92077528 -74572768 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1287 313 113 56 0 chrX 92078113 92078184 -74572112 + (CAGAGA)n Simple_repeat Simple_repeat 2 76 0 1 1287 540 95 0 0 chrX 92078252 92078336 -74571960 + (GGGA)n Simple_repeat Simple_repeat 3 86 0 1 1287 505 291 44 6 chrX 92078512 92078671 -74571625 - Lx9 LINE L1 -342 7302 7138 1 1287 374 53 18 0 chrX 92078727 92078784 -74571512 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1287 1963 194 35 9 chrX 92078797 92079229 -74571067 - RMER15 LTR ERVL -57 518 76 1 1287 1821 298 163 40 chrX 92079324 92079484 -74570812 - Lx9 LINE L1 -532 7112 6965 1 1287 3765 184 84 34 chrX 92079484 92080341 -74569955 + RMER19B LTR ERVK 3 902 0 1 1287 1821 298 163 40 chrX 92080341 92080756 -74569540 - Lx9 LINE L1 -680 6964 6512 1 1287 1944 190 23 0 chrX 92080756 92081140 -74569156 + ORR1B1 LTR MaLR 1 393 -1 1 1287 6514 205 12 32 chrX 92081141 92082680 -74567616 + ORR1B1-int LTR MaLR 1 1509 0 1 1287 1649 214 57 5 chrX 92082680 92083052 -74567244 + ORR1B1 LTR MaLR 1 391 -3 1 1287 1821 298 163 40 chrX 92083052 92083829 -74566467 - Lx9 LINE L1 -1133 6511 5590 1 1287 948 287 29 36 chrX 92083877 92084476 -74565820 - L1_Rod LINE L1 -4247 1600 1008 1 1287 407 254 215 31 chrX 92085493 92085800 -74564496 - L1ME1 LINE L1 -219 6023 5665 1 1287 36 0 0 0 chrX 92085986 92086022 -74564274 + AT_rich Low_complexity Low_complexity 1 36 0 1 1287 723 75 0 40 chrX 92086198 92086323 -74563973 + L1Md_F2 LINE L1 6462 6581 -1 1 1287 489 294 24 88 chrX 92086459 92086754 -74563542 + LTR55 LTR ERV 18 293 -255 1 1287 572 51 0 25 chrX 92086832 92086913 -74563383 + (TATG)n Simple_repeat Simple_repeat 2 80 0 1 1287 4095 198 29 44 chrX 92086953 92087993 -74562303 - L1_Mur3 LINE L1 -1116 4764 3741 1 1287 1801 95 34 0 chrX 92088379 92088643 -74561653 - L1Md_A LINE L1 -6178 546 274 1 1287 1164 47 7 0 chrX 92088646 92088796 -74561500 + L1Md_A LINE L1 6431 6581 -1 1 1287 29 28 0 0 chrX 92088807 92088843 -74561453 + AT_rich Low_complexity Low_complexity 1 36 0 1 1287 382 203 16 24 chrX 92089469 92089595 -74560701 + GA-rich Low_complexity Low_complexity 2 126 0 1 1287 875 133 0 0 chrX 92091412 92091547 -74558749 - MusHAL1 LINE L1 -1569 1143 1009 1 1287 1005 101 44 0 chrX 92091547 92091706 -74558590 + L1_Mus3 LINE L1 6473 6638 0 1 1287 440 288 70 6 chrX 92092167 92092338 -74557958 - B3A SINE B2 -16 182 1 1 1287 8352 41 6 1 chrX 92093027 92094630 -74555666 - L1Md_F2 LINE L1 -2 6580 4969 1 1287 1556 140 10 14 chrX 92095192 92095481 -74554815 + RLTR28 LTR ERVL 2 289 -235 1 1287 1294 144 27 0 chrX 92095484 92095706 -74554590 - Lx2 LINE L1 0 6997 6770 1 1287 789 172 71 127 chrX 92095739 92096006 -74554290 + RLTR28 LTR ERVL 273 524 0 1 1287 185 0 0 39 chrX 92096189 92096215 -74554081 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 1 1287 2771 172 48 48 chrX 92096885 92097142 -74553154 - RMER4B LTR ERVK 0 585 344 1 1287 1689 31 0 0 chrX 92097142 92097334 -74552962 - B2_Mm1a SINE B2 0 193 2 1 1287 2771 172 48 48 chrX 92097334 92097661 -74552635 - RMER4B LTR ERVK -242 343 1 1 1287 366 332 38 51 chrX 92097661 92097896 -74552400 + HERVL40-int LTR ERVL 3771 4002 -1528 1 1287 583 251 44 74 chrX 92097896 92098167 -74552129 - L1M2 LINE L1 -552 5748 5486 1 1287 554 268 110 31 chrX 92098233 92098460 -74551836 - Lx8 LINE L1 -2 7471 7227 1 1287 672 301 59 8 chrX 92098472 92098710 -74551586 - Lx8 LINE L1 -652 6821 6572 1 1287 3810 200 89 35 chrX 92098897 92099839 -74550457 + RodERV21-int LTR ERV1 3 995 -3996 1 1287 721 210 99 94 chrX 92100124 92100446 -74549850 + RLTR42-int LTR ERVK 1104 1330 -4192 1 1287 342 311 25 44 chrX 92100559 92100717 -74549579 + RLTR42-int LTR ERVK 1641 1795 -3727 1 1287 7250 199 40 65 chrX 92100738 92102288 -74548008 + RodERV21-int LTR ERV1 1010 2529 -2462 1 1287 4703 112 81 1 chrX 92102288 92102969 -74547327 - RMER19A LTR ERVK 0 737 3 1 1287 7250 199 40 65 chrX 92102969 92103027 -74547269 + RodERV21-int LTR ERV1 2530 2578 -2413 1 1287 195 42 0 0 chrX 92103029 92103053 -74547243 + (TCC)n Simple_repeat Simple_repeat 1 24 0 1 1287 1419 99 37 14 chrX 92104231 92104447 -74545849 + MTC LTR MaLR 192 412 -9 1 1287 5895 175 62 14 chrX 92104451 92105582 -74544714 + MTC-int LTR MaLR 2 1189 -69 1 1287 234 0 0 0 chrX 92105582 92105608 -74544688 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 1 1287 5895 175 62 14 chrX 92105608 92105676 -74544620 + MTC-int LTR MaLR 1190 1258 0 1 1287 2146 178 22 10 chrX 92105678 92106087 -74544209 + MTC LTR MaLR 3 416 -5 1 1287 4326 136 79 64 chrX 92106277 92107148 -74543148 + RMER19B LTR ERVK 2 885 -17 1 1287 1247 28 7 0 chrX 92107148 92107293 -74543003 + B1_Mus2 SINE Alu 2 147 0 1 1287 349 184 44 44 chrX 92107805 92107896 -74542400 + RLTR19-int LTR ERVK 1884 1974 -3548 1 1287 1148 243 103 33 chrX 92107889 92108587 -74541709 + RLTR19-int LTR ERVK 1930 2894 -3243 1 1287 916 166 11 93 chrX 92108646 92108907 -74541389 + RMER17C LTR ERVK 1 240 -170 1 1287 279 0 0 0 chrX 92108907 92108938 -74541358 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1287 916 166 11 93 chrX 92108938 92108955 -74541341 + RMER17C LTR ERVK 241 256 -154 1 1287 397 265 15 61 chrX 92108980 92108993 -74541303 - RMER17B LTR ERVK -345 464 453 1 1287 1077 62 28 7 chrX 92108993 92109138 -74541158 + B1_Mus1 SINE Alu 1 148 0 1 1287 1006 171 36 35 chrX 92109138 92109429 -74540867 - RMER17B LTR ERVK -357 452 183 1 1287 3300 129 180 13 chrX 92109432 92110037 -74540259 - RMER17C-int LTR ERVK 0 3238 2533 1 1287 953 129 24 6 chrX 92110049 92110213 -74540083 - RMER17C-int LTR ERVK -902 2336 2170 1 1287 855 166 251 38 chrX 92110218 92110615 -74539681 - RMER17C-int LTR ERVK -1250 1988 1508 1 1287 21 0 0 0 chrX 92111464 92111485 -74538811 + GC_rich Low_complexity Low_complexity 1 21 0 1 1287 1052 207 98 20 chrX 92111916 92112424 -74537872 - RMER17B LTR ERVK -2709 529 16 1 1287 918 113 0 39 chrX 92112433 92112589 -74537707 + RMER17C LTR ERVK 261 410 0 1 1287 305 277 54 108 chrX 92112658 92112917 -74537379 + RLTR19-int LTR ERVK 2946 3190 -2947 1 1287 377 159 0 43 chrX 92112993 92113057 -74537239 + RLTR19-int LTR ERVK 3190 3251 -2886 1 1287 1200 75 81 0 chrX 92113057 92113230 -74537066 + B2_Mm2 SINE B2 2 188 -7 1 1287 377 159 0 43 chrX 92113230 92113257 -74537039 + RLTR19-int LTR ERVK 3252 3277 -2860 1 1287 23 54 0 0 chrX 92113260 92113297 -74536999 + AT_rich Low_complexity Low_complexity 1 37 0 1 1287 578 269 55 114 chrX 92113317 92113824 -74536472 + RLTR19-int LTR ERVK 3681 4157 -1980 1 1287 437 262 15 15 chrX 92113957 92114089 -74536207 + RLTR19-int LTR ERVK 4243 4374 -1763 1 1287 1071 203 10 5 chrX 92114273 92114466 -74535830 - RLTR18 LTR ERVK 0 616 423 1 1287 343 174 70 0 chrX 92114440 92114526 -74535770 - RMER5 LTR ERV1 -109 425 334 1 1287 1136 112 37 5 chrX 92114526 92114714 -74535582 + B2_Mm2 SINE B2 2 195 0 1 1287 434 221 59 147 chrX 92115394 92115405 -74534891 - B4 SINE B4 -69 223 215 1 1287 317 24 24 0 chrX 92115405 92115447 -74534849 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1 1287 893 94 28 28 chrX 92115447 92115576 -74534720 - B1_Mus1 SINE Alu -12 136 6 1 1287 434 221 59 147 chrX 92115576 92115605 -74534691 - B4 SINE B4 -78 214 69 1 1287 209 109 0 61 chrX 92115636 92115685 -74534611 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 1 1287 3749 44 0 2 chrX 92115888 92116344 -74533952 + L1Md_F2 LINE L1 6126 6580 -2 1 1287 980 134 0 0 chrX 92116363 92116505 -74533791 + B1_Mus1 SINE Alu 2 143 -5 1 1287 185 83 28 0 chrX 92116505 92116541 -74533755 + (TAAAAA)n Simple_repeat Simple_repeat 5 41 0 1 1287 195 114 0 0 chrX 92116792 92116827 -74533469 + (TTTTTG)n Simple_repeat Simple_repeat 4 38 0 1 1287 1044 95 0 20 chrX 92116869 92117019 -74533277 + B1_Mus1 SINE Alu 2 148 0 1 1287 558 0 0 0 chrX 92117083 92117145 -74533151 + (TC)n Simple_repeat Simple_repeat 2 63 0 1 1287 1012 123 14 0 chrX 92117146 92117292 -74533004 - B1_Mus1 SINE Alu 0 148 1 1 1287 840 156 0 14 chrX 92117554 92117697 -74532599 + B1_Mus1 SINE Alu 2 142 -6 1 1287 249 33 0 0 chrX 92117700 92117730 -74532566 + (A)n Simple_repeat Simple_repeat 1 30 0 1 1287 900 142 0 7 chrX 92118050 92118192 -74532104 + B1_Mus1 SINE Alu 8 148 0 1 1287 539 29 14 0 chrX 92118252 92118321 -74531975 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1287 988 123 14 0 chrX 92118330 92118476 -74531820 - B1_Mus1 SINE Alu 0 148 1 1 1287 925 152 0 14 chrX 92118746 92118893 -74531403 + B1_Mus1 SINE Alu 2 146 -2 1 1287 417 39 0 0 chrX 92118969 92119020 -74531276 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1287 276 77 0 0 chrX 92119021 92119060 -74531236 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1 1287 751 140 58 7 chrX 92119062 92119199 -74531097 - B1_Mus1 SINE Alu -4 144 1 1 1287 992 106 0 14 chrX 92119453 92119596 -74530700 + B1_Mus1 SINE Alu 2 142 -6 1 1287 1020 116 0 0 chrX 92119703 92119850 -74530446 - B1_Mus1 SINE Alu -1 147 1 1 1287 239 162 14 56 chrX 92120019 92120091 -74530205 + T-rich Low_complexity Low_complexity 2 70 0 1 1287 764 169 0 0 chrX 92120113 92120237 -74530059 + B1_Mus1 SINE Alu 2 125 -23 1 1287 343 141 0 150 chrX 92120204 92120304 -74529992 + B1_Mur4 SINE Alu 66 150 0 1 1287 1051 109 0 7 chrX 92120388 92120536 -74529760 - B1_Mus1 SINE Alu -1 147 1 1 1287 894 138 14 14 chrX 92120812 92120952 -74529344 + B1_Mus1 SINE Alu 2 141 -7 1 1287 262 217 43 0 chrX 92121025 92121094 -74529202 + CT-rich Low_complexity Low_complexity 2 73 0 1 1287 974 108 0 7 chrX 92121094 92121243 -74529053 - B1_Mus1 SINE Alu 0 148 1 1 1287 928 128 0 14 chrX 92121497 92121640 -74528656 + B1_Mus1 SINE Alu 2 142 -6 1 1287 1002 104 0 7 chrX 92121747 92121892 -74528404 - B1_Mus1 SINE Alu 0 148 5 1 1287 24 0 0 0 chrX 92122102 92122126 -74528170 + AT_rich Low_complexity Low_complexity 1 24 0 1 1287 767 161 0 0 chrX 92122161 92122285 -74528011 + B1_Mus1 SINE Alu 2 125 -23 1 1287 343 141 0 150 chrX 92122252 92122352 -74527944 + B1_Mur4 SINE Alu 66 150 0 1 1287 183 42 0 0 chrX 92122418 92122442 -74527854 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 1287 1022 119 0 0 chrX 92122444 92122587 -74527709 - B1_Mus1 SINE Alu -5 143 1 1 1287 914 152 0 14 chrX 92122862 92123009 -74527287 + B1_Mus1 SINE Alu 2 146 -2 1 1287 223 171 24 0 chrX 92123078 92123119 -74527177 + CT-rich Low_complexity Low_complexity 2 43 0 1 1287 201 94 0 0 chrX 92123120 92123152 -74527144 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1287 997 88 0 13 chrX 92123152 92123302 -74526994 - B1_Mus1 SINE Alu 0 148 1 2 1287 992 116 0 13 chrX 92123556 92123705 -74526591 + B1_Mus1 SINE Alu 2 148 0 2 1287 1054 98 0 0 chrX 92123807 92123950 -74526346 - B1_Mus1 SINE Alu -5 143 1 2 1287 216 247 0 0 chrX 92124126 92124199 -74526097 + T-rich Low_complexity Low_complexity 1 73 0 2 1287 785 161 0 0 chrX 92124221 92124345 -74525951 + B1_Mus1 SINE Alu 2 125 -23 2 1287 343 141 0 150 chrX 92124312 92124412 -74525884 + B1_Mur4 SINE Alu 66 150 0 2 1287 1022 119 0 0 chrX 92124505 92124648 -74525648 - B1_Mus1 SINE Alu -5 143 1 2 1287 974 138 0 14 chrX 92124924 92125071 -74525225 + B1_Mus1 SINE Alu 2 146 -2 2 1287 223 171 24 0 chrX 92125140 92125181 -74525115 + CT-rich Low_complexity Low_complexity 2 43 0 2 1287 210 91 0 0 chrX 92125182 92125215 -74525081 + (T)n Simple_repeat Simple_repeat 1 33 0 2 1287 1001 95 0 7 chrX 92125215 92125364 -74524932 - B1_Mus1 SINE Alu 0 148 1 2 1287 992 116 0 13 chrX 92125617 92125766 -74524530 + B1_Mus1 SINE Alu 2 148 0 2 1287 1034 105 0 0 chrX 92125868 92126011 -74524285 - B1_Mus1 SINE Alu -5 143 1 2 1287 21 0 0 0 chrX 92126219 92126240 -74524056 + AT_rich Low_complexity Low_complexity 1 21 0 2 1287 785 161 0 0 chrX 92126275 92126399 -74523897 + B1_Mus1 SINE Alu 2 125 -23 2 1287 328 153 0 150 chrX 92126366 92126466 -74523830 + B1_Mur4 SINE Alu 66 150 0 2 1287 1010 126 0 0 chrX 92126558 92126701 -74523595 - B1_Mus1 SINE Alu -5 143 1 2 1287 914 152 0 14 chrX 92126977 92127124 -74523172 + B1_Mus1 SINE Alu 2 146 -2 2 1287 223 171 24 0 chrX 92127193 92127234 -74523062 + CT-rich Low_complexity Low_complexity 2 43 0 2 1287 192 97 0 0 chrX 92127235 92127266 -74523030 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1287 988 95 0 13 chrX 92127266 92127416 -74522880 - B1_Mus1 SINE Alu 0 148 1 2 1287 967 129 0 13 chrX 92127670 92127819 -74522477 + B1_Mus1 SINE Alu 2 148 0 2 1287 1054 98 0 0 chrX 92127921 92128064 -74522232 - B1_Mus1 SINE Alu -5 143 1 2 1287 24 0 0 0 chrX 92128254 92128278 -74522018 + AT_rich Low_complexity Low_complexity 1 24 0 2 1287 785 161 0 0 chrX 92128313 92128437 -74521859 + B1_Mus1 SINE Alu 2 125 -23 2 1287 331 153 0 150 chrX 92128404 92128504 -74521792 + B1_Mur4 SINE Alu 66 150 0 2 1287 1022 119 0 0 chrX 92128596 92128739 -74521557 - B1_Mus1 SINE Alu -5 143 1 2 1287 986 131 0 14 chrX 92129015 92129162 -74521134 + B1_Mus1 SINE Alu 2 146 -2 2 1287 223 171 24 0 chrX 92129231 92129272 -74521024 + CT-rich Low_complexity Low_complexity 2 43 0 2 1287 219 88 0 0 chrX 92129273 92129307 -74520989 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1287 1001 95 0 7 chrX 92129307 92129456 -74520840 - B1_Mus1 SINE Alu 0 148 1 2 1287 995 116 0 13 chrX 92129709 92129858 -74520438 + B1_Mus1 SINE Alu 2 148 0 2 1287 1034 105 0 0 chrX 92129960 92130103 -74520193 - B1_Mus1 SINE Alu -5 143 1 2 1287 21 0 0 0 chrX 92130311 92130332 -74519964 + AT_rich Low_complexity Low_complexity 1 21 0 2 1287 758 169 0 0 chrX 92130367 92130491 -74519805 + B1_Mus1 SINE Alu 2 125 -23 2 1287 328 153 0 150 chrX 92130458 92130558 -74519738 + B1_Mur4 SINE Alu 66 150 0 2 1287 188 35 35 0 chrX 92130619 92130648 -74519648 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 2 1287 1010 126 0 0 chrX 92130650 92130793 -74519503 - B1_Mus1 SINE Alu -5 143 1 2 1287 914 152 0 14 chrX 92131069 92131216 -74519080 + B1_Mus1 SINE Alu 2 146 -2 2 1287 262 217 43 0 chrX 92131285 92131354 -74518942 + CT-rich Low_complexity Low_complexity 2 73 0 2 1287 1001 95 0 7 chrX 92131354 92131503 -74518793 - B1_Mus1 SINE Alu 0 148 1 2 1287 966 114 0 14 chrX 92131756 92131898 -74518398 + B1_Mus1 SINE Alu 2 141 -7 2 1287 1034 105 0 0 chrX 92132006 92132149 -74518147 - B1_Mus1 SINE Alu -5 143 1 2 1287 21 0 0 0 chrX 92132358 92132379 -74517917 + AT_rich Low_complexity Low_complexity 1 21 0 2 1287 785 161 0 0 chrX 92132414 92132538 -74517758 + B1_Mus1 SINE Alu 2 125 -23 2 1287 343 141 0 150 chrX 92132505 92132605 -74517691 + B1_Mur4 SINE Alu 66 150 0 2 1287 188 35 35 0 chrX 92132666 92132695 -74517601 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 2 1287 1022 119 0 0 chrX 92132697 92132840 -74517456 - B1_Mus1 SINE Alu -5 143 1 2 1287 934 145 0 14 chrX 92133116 92133263 -74517033 + B1_Mus1 SINE Alu 2 146 -2 2 1287 266 225 42 0 chrX 92133332 92133403 -74516893 + CT-rich Low_complexity Low_complexity 4 77 0 2 1287 1001 95 0 7 chrX 92133403 92133552 -74516744 - B1_Mus1 SINE Alu 0 148 1 2 1287 995 116 0 13 chrX 92133805 92133954 -74516342 + B1_Mus1 SINE Alu 2 148 0 2 1287 1054 98 0 0 chrX 92134056 92134199 -74516097 - B1_Mus1 SINE Alu -5 143 1 2 1287 207 250 0 0 chrX 92134376 92134448 -74515848 + T-rich Low_complexity Low_complexity 1 72 0 2 1287 735 177 0 0 chrX 92134470 92134594 -74515702 + B1_Mus1 SINE Alu 2 125 -23 2 1287 337 143 0 152 chrX 92134561 92134660 -74515636 + B1_Mur4 SINE Alu 66 149 -1 2 1287 191 61 30 0 chrX 92134718 92134751 -74515545 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 2 1287 1022 119 0 0 chrX 92134753 92134896 -74515400 - B1_Mus1 SINE Alu -5 143 1 2 1287 959 138 0 14 chrX 92135171 92135318 -74514978 + B1_Mus1 SINE Alu 2 146 -2 2 1287 262 217 43 0 chrX 92135387 92135456 -74514840 + CT-rich Low_complexity Low_complexity 2 73 0 2 1287 994 90 0 7 chrX 92135459 92135604 -74514692 - B1_Mus1 SINE Alu -4 144 1 2 1287 993 106 0 14 chrX 92135857 92136000 -74514296 + B1_Mus1 SINE Alu 2 142 -6 2 1287 1034 105 0 0 chrX 92136126 92136269 -74514027 - B1_Mus1 SINE Alu -5 143 1 2 1287 23 0 0 0 chrX 92136479 92136502 -74513794 + AT_rich Low_complexity Low_complexity 1 23 0 2 1287 785 161 0 0 chrX 92136537 92136661 -74513635 + B1_Mus1 SINE Alu 2 125 -23 2 1287 343 141 0 150 chrX 92136628 92136728 -74513568 + B1_Mur4 SINE Alu 66 150 0 2 1287 188 35 35 0 chrX 92136789 92136818 -74513478 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 2 1287 1022 119 0 0 chrX 92136820 92136963 -74513333 - B1_Mus1 SINE Alu -5 143 1 2 1287 934 145 0 14 chrX 92137239 92137386 -74512910 + B1_Mus1 SINE Alu 2 146 -2 2 1287 262 217 43 0 chrX 92137455 92137524 -74512772 + CT-rich Low_complexity Low_complexity 2 73 0 2 1287 1001 95 0 7 chrX 92137525 92137674 -74512622 - B1_Mus1 SINE Alu 0 148 1 2 1287 992 116 0 13 chrX 92137927 92138076 -74512220 + B1_Mus1 SINE Alu 2 148 0 2 1287 1034 105 0 0 chrX 92138178 92138321 -74511975 - B1_Mus1 SINE Alu -5 143 1 2 1287 21 0 0 0 chrX 92138529 92138550 -74511746 + AT_rich Low_complexity Low_complexity 1 21 0 2 1287 758 169 0 0 chrX 92138585 92138709 -74511587 + B1_Mus1 SINE Alu 2 125 -23 2 1287 328 153 0 150 chrX 92138676 92138776 -74511520 + B1_Mur4 SINE Alu 66 150 0 2 1287 188 35 35 0 chrX 92138837 92138866 -74511430 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 2 1287 1022 119 0 0 chrX 92138868 92139011 -74511285 - B1_Mus1 SINE Alu -5 143 1 2 1287 934 145 0 14 chrX 92139287 92139434 -74510862 + B1_Mus1 SINE Alu 2 146 -2 2 1287 262 217 43 0 chrX 92139503 92139572 -74510724 + CT-rich Low_complexity Low_complexity 2 73 0 2 1287 1001 95 0 7 chrX 92139573 92139722 -74510574 - B1_Mus1 SINE Alu 0 148 1 2 1287 992 116 0 13 chrX 92139976 92140125 -74510171 + B1_Mus1 SINE Alu 2 148 0 2 1287 1054 98 0 0 chrX 92140227 92140370 -74509926 - B1_Mus1 SINE Alu -5 143 1 2 1287 216 247 0 0 chrX 92140546 92140619 -74509677 + T-rich Low_complexity Low_complexity 1 73 0 2 1287 735 177 0 0 chrX 92140641 92140765 -74509531 + B1_Mus1 SINE Alu 2 125 -23 2 1287 337 143 0 152 chrX 92140732 92140831 -74509465 + B1_Mur4 SINE Alu 66 149 -1 2 1287 1022 119 0 0 chrX 92140920 92141063 -74509233 - B1_Mus1 SINE Alu -5 143 1 2 1287 959 138 0 14 chrX 92141339 92141486 -74508810 + B1_Mus1 SINE Alu 2 146 -2 2 1287 262 217 43 0 chrX 92141555 92141624 -74508672 + CT-rich Low_complexity Low_complexity 2 73 0 2 1287 994 90 0 7 chrX 92141627 92141772 -74508524 - B1_Mus1 SINE Alu -4 144 1 2 1287 995 116 0 13 chrX 92142025 92142174 -74508122 + B1_Mus1 SINE Alu 2 148 0 2 1287 1054 98 0 0 chrX 92142276 92142419 -74507877 - B1_Mus1 SINE Alu -5 143 1 2 1287 216 247 0 0 chrX 92142595 92142668 -74507628 + T-rich Low_complexity Low_complexity 1 73 0 2 1287 785 161 0 0 chrX 92142690 92142814 -74507482 + B1_Mus1 SINE Alu 2 125 -23 2 1287 343 141 0 150 chrX 92142781 92142881 -74507415 + B1_Mur4 SINE Alu 66 150 0 2 1287 188 35 35 0 chrX 92142943 92142972 -74507324 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 2 1287 1022 119 0 0 chrX 92142974 92143117 -74507179 - B1_Mus1 SINE Alu -5 143 1 2 1287 934 145 0 14 chrX 92143393 92143540 -74506756 + B1_Mus1 SINE Alu 2 146 -2 2 160 262 217 43 0 chrX 92143609 92143678 -74506618 + CT-rich Low_complexity Low_complexity 2 73 0 2 1288 994 90 0 7 chrX 92143681 92143826 -74506470 - B1_Mus1 SINE Alu -4 144 1 2 1288 995 116 0 13 chrX 92144079 92144228 -74506068 + B1_Mus1 SINE Alu 2 148 0 3 1288 1054 98 0 0 chrX 92144330 92144473 -74505823 - B1_Mus1 SINE Alu -5 143 1 3 1288 26 0 0 0 chrX 92144683 92144709 -74505587 + AT_rich Low_complexity Low_complexity 1 26 0 3 1288 735 177 0 0 chrX 92144744 92144868 -74505428 + B1_Mus1 SINE Alu 2 125 -23 3 1288 337 143 0 152 chrX 92144835 92144934 -74505362 + B1_Mur4 SINE Alu 66 149 -1 3 1288 1022 119 0 0 chrX 92145023 92145166 -74505130 - B1_Mus1 SINE Alu -5 143 1 3 1288 959 138 0 14 chrX 92145441 92145588 -74504708 + B1_Mus1 SINE Alu 2 146 -2 3 1288 275 222 42 0 chrX 92145657 92145729 -74504567 + CT-rich Low_complexity Low_complexity 3 77 0 3 1288 1001 95 0 7 chrX 92145729 92145878 -74504418 - B1_Mus1 SINE Alu 0 148 1 3 1288 993 106 0 14 chrX 92146132 92146275 -74504021 + B1_Mus1 SINE Alu 2 142 -6 3 1288 1021 112 0 0 chrX 92146401 92146544 -74503752 - B1_Mus1 SINE Alu -5 143 1 3 1288 21 0 0 0 chrX 92146753 92146774 -74503522 + AT_rich Low_complexity Low_complexity 1 21 0 3 1288 758 169 0 0 chrX 92146809 92146933 -74503363 + B1_Mus1 SINE Alu 2 125 -23 3 1288 343 141 0 150 chrX 92146900 92147000 -74503296 + B1_Mur4 SINE Alu 66 150 0 3 1288 1022 119 0 0 chrX 92147090 92147233 -74503063 - B1_Mus1 SINE Alu -5 143 1 3 1288 959 138 0 14 chrX 92147509 92147656 -74502640 + B1_Mus1 SINE Alu 2 146 -2 3 1288 262 217 43 0 chrX 92147725 92147794 -74502502 + CT-rich Low_complexity Low_complexity 2 73 0 3 1288 1001 95 0 7 chrX 92147795 92147944 -74502352 - B1_Mus1 SINE Alu 0 148 1 3 1288 971 122 0 13 chrX 92148199 92148348 -74501948 + B1_Mus1 SINE Alu 2 148 0 3 1288 1054 98 0 0 chrX 92148450 92148593 -74501703 - B1_Mus1 SINE Alu -5 143 1 3 1288 207 250 0 0 chrX 92148769 92148841 -74501455 + T-rich Low_complexity Low_complexity 1 72 0 3 1288 785 161 0 0 chrX 92148863 92148987 -74501309 + B1_Mus1 SINE Alu 2 125 -23 3 1288 343 141 0 150 chrX 92148954 92149054 -74501242 + B1_Mur4 SINE Alu 66 150 0 3 1288 1010 126 0 0 chrX 92149145 92149288 -74501008 - B1_Mus1 SINE Alu -5 143 1 3 1288 959 138 0 14 chrX 92149564 92149711 -74500585 + B1_Mus1 SINE Alu 2 146 -2 3 1288 273 217 43 0 chrX 92149780 92149849 -74500447 + CT-rich Low_complexity Low_complexity 2 73 0 3 1288 1001 95 0 7 chrX 92149849 92149998 -74500298 - B1_Mus1 SINE Alu 0 148 1 3 1288 993 106 0 14 chrX 92150252 92150395 -74499901 + B1_Mus1 SINE Alu 2 142 -6 3 1288 1034 105 0 0 chrX 92150521 92150664 -74499632 - B1_Mus1 SINE Alu -5 143 1 3 1288 758 169 0 0 chrX 92150928 92151052 -74499244 + B1_Mus1 SINE Alu 2 125 -23 3 1288 343 141 0 150 chrX 92151019 92151119 -74499177 + B1_Mur4 SINE Alu 66 150 0 3 1288 1022 119 0 0 chrX 92151209 92151352 -74498944 - B1_Mus1 SINE Alu -5 143 1 3 1288 934 145 0 14 chrX 92151628 92151775 -74498521 + B1_Mus1 SINE Alu 2 146 -2 3 1288 262 217 43 0 chrX 92151844 92151913 -74498383 + CT-rich Low_complexity Low_complexity 2 73 0 3 1288 1001 95 0 7 chrX 92151914 92152063 -74498233 - B1_Mus1 SINE Alu 0 148 1 3 1288 978 107 0 14 chrX 92152316 92152458 -74497838 + B1_Mus1 SINE Alu 2 141 -7 3 1288 1034 105 0 0 chrX 92152566 92152709 -74497587 - B1_Mus1 SINE Alu -5 143 1 3 1288 785 161 0 0 chrX 92152973 92153097 -74497199 + B1_Mus1 SINE Alu 2 125 -23 3 1288 343 141 0 150 chrX 92153064 92153164 -74497132 + B1_Mur4 SINE Alu 66 150 0 3 1288 188 35 35 0 chrX 92153227 92153256 -74497040 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 3 1288 1022 119 0 0 chrX 92153258 92153401 -74496895 - B1_Mus1 SINE Alu -5 143 1 3 1288 934 145 0 14 chrX 92153677 92153824 -74496472 + B1_Mus1 SINE Alu 2 146 -2 3 1288 262 217 43 0 chrX 92153893 92153962 -74496334 + CT-rich Low_complexity Low_complexity 2 73 0 3 1288 1001 95 0 7 chrX 92153963 92154112 -74496184 - B1_Mus1 SINE Alu 0 148 1 3 1288 995 116 0 13 chrX 92154365 92154514 -74495782 + B1_Mus1 SINE Alu 2 148 0 3 1288 1054 98 0 0 chrX 92154616 92154759 -74495537 - B1_Mus1 SINE Alu -5 143 1 3 1288 216 247 0 0 chrX 92154936 92155009 -74495287 + T-rich Low_complexity Low_complexity 1 73 0 3 1288 735 177 0 0 chrX 92155031 92155155 -74495141 + B1_Mus1 SINE Alu 2 125 -23 3 1288 337 143 0 152 chrX 92155122 92155221 -74495075 + B1_Mur4 SINE Alu 66 149 -1 3 1288 1022 119 0 0 chrX 92155310 92155453 -74494843 - B1_Mus1 SINE Alu -5 143 1 3 1288 959 138 0 14 chrX 92155728 92155875 -74494421 + B1_Mus1 SINE Alu 2 146 -2 3 1288 262 217 43 0 chrX 92155944 92156013 -74494283 + CT-rich Low_complexity Low_complexity 2 73 0 3 1288 994 90 0 7 chrX 92156016 92156161 -74494135 - B1_Mus1 SINE Alu -4 144 1 3 1288 995 116 0 13 chrX 92156414 92156563 -74493733 + B1_Mus1 SINE Alu 2 148 0 3 1288 1054 98 0 0 chrX 92156665 92156808 -74493488 - B1_Mus1 SINE Alu -5 143 1 3 1288 25 0 0 0 chrX 92157017 92157042 -74493254 + AT_rich Low_complexity Low_complexity 1 25 0 3 1288 785 161 0 0 chrX 92157077 92157201 -74493095 + B1_Mus1 SINE Alu 2 125 -23 3 1288 337 143 0 152 chrX 92157168 92157267 -74493029 + B1_Mur4 SINE Alu 66 149 -1 3 1288 1022 119 0 0 chrX 92157358 92157501 -74492795 - B1_Mus1 SINE Alu -5 143 1 3 1288 959 138 0 14 chrX 92157777 92157924 -74492372 + B1_Mus1 SINE Alu 2 146 -2 3 1288 273 217 43 0 chrX 92157993 92158062 -74492234 + CT-rich Low_complexity Low_complexity 2 73 0 3 1288 1001 95 0 7 chrX 92158062 92158211 -74492085 - B1_Mus1 SINE Alu 0 148 1 3 1288 993 106 0 14 chrX 92158465 92158608 -74491688 + B1_Mus1 SINE Alu 2 142 -6 3 1288 1034 105 0 0 chrX 92158734 92158877 -74491419 - B1_Mus1 SINE Alu -5 143 1 3 1288 24 0 0 0 chrX 92159086 92159110 -74491186 + AT_rich Low_complexity Low_complexity 1 24 0 3 1288 758 169 0 0 chrX 92159145 92159269 -74491027 + B1_Mus1 SINE Alu 2 125 -23 3 1288 330 153 0 150 chrX 92159236 92159336 -74490960 + B1_Mur4 SINE Alu 66 150 0 3 1288 188 35 35 0 chrX 92159400 92159429 -74490867 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 3 1288 1022 119 0 0 chrX 92159431 92159574 -74490722 - B1_Mus1 SINE Alu -5 143 1 3 1288 959 138 0 14 chrX 92159850 92159997 -74490299 + B1_Mus1 SINE Alu 2 146 -2 3 1288 253 221 44 0 chrX 92160066 92160134 -74490162 + CT-rich Low_complexity Low_complexity 3 73 0 3 1288 1001 95 0 7 chrX 92160134 92160283 -74490013 - B1_Mus1 SINE Alu 0 148 1 3 1288 993 106 0 14 chrX 92160537 92160680 -74489616 + B1_Mus1 SINE Alu 2 142 -6 3 1288 1034 105 0 0 chrX 92160806 92160949 -74489347 - B1_Mus1 SINE Alu -5 143 1 3 1288 758 169 0 0 chrX 92161213 92161337 -74488959 + B1_Mus1 SINE Alu 2 125 -23 3 1288 337 143 0 152 chrX 92161304 92161403 -74488893 + B1_Mur4 SINE Alu 66 149 -1 3 1288 1022 119 0 0 chrX 92161494 92161637 -74488659 - B1_Mus1 SINE Alu -5 143 1 3 1288 934 145 0 14 chrX 92161913 92162060 -74488236 + B1_Mus1 SINE Alu 2 146 -2 3 1288 262 217 43 0 chrX 92162129 92162198 -74488098 + CT-rich Low_complexity Low_complexity 2 73 0 3 1288 1001 95 0 7 chrX 92162199 92162348 -74487948 - B1_Mus1 SINE Alu 0 148 1 3 1288 971 122 0 13 chrX 92162603 92162752 -74487544 + B1_Mus1 SINE Alu 2 148 0 3 1288 1054 98 0 0 chrX 92162854 92162997 -74487299 - B1_Mus1 SINE Alu -5 143 1 3 1288 25 0 0 0 chrX 92163206 92163231 -74487065 + AT_rich Low_complexity Low_complexity 1 25 0 3 1288 716 169 0 46 chrX 92163266 92163396 -74486900 + B1_Mus1 SINE Alu 2 125 -23 3 1288 352 165 0 150 chrX 92163363 92163463 -74486833 + B1_Mur4 SINE Alu 66 150 0 3 1288 1046 112 0 0 chrX 92163547 92163690 -74486606 - B1_Mus1 SINE Alu -5 143 1 3 1288 954 126 14 14 chrX 92163967 92164112 -74486184 + B1_Mus1 SINE Alu 2 146 -2 3 1288 210 143 0 0 chrX 92164187 92164222 -74486074 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 1288 995 95 0 13 chrX 92164246 92164396 -74485900 - B1_Mus1 SINE Alu 0 148 1 3 1288 981 113 0 14 chrX 92164650 92164793 -74485503 + B1_Mus1 SINE Alu 2 142 -6 3 1288 1044 105 0 0 chrX 92164919 92165062 -74485234 - B1_Mus1 SINE Alu -5 143 1 3 1288 28 29 0 0 chrX 92165272 92165307 -74484989 + AT_rich Low_complexity Low_complexity 1 35 0 3 1288 759 185 11 45 chrX 92165329 92165520 -74484776 + B1_Mus1 SINE Alu 2 148 0 3 1288 188 35 35 0 chrX 92165578 92165607 -74484689 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 3 1288 1034 119 0 0 chrX 92165609 92165752 -74484544 - B1_Mus1 SINE Alu -5 143 1 3 1288 956 113 0 14 chrX 92166027 92166170 -74484126 + B1_Mus1 SINE Alu 2 142 -6 3 1288 1033 105 0 0 chrX 92166279 92166422 -74483874 - B1_Mus1 SINE Alu -5 143 1 3 1288 31 26 0 0 chrX 92166628 92166666 -74483630 + AT_rich Low_complexity Low_complexity 1 38 0 3 1288 753 169 0 0 chrX 92166688 92166812 -74483484 + B1_Mus1 SINE Alu 2 125 -23 3 1288 346 153 0 150 chrX 92166779 92166879 -74483417 + B1_Mur4 SINE Alu 66 150 0 3 1288 1092 116 0 13 chrX 92166956 92167105 -74483191 - B1_Mus1 SINE Alu -1 147 1 4 1288 1031 119 14 14 chrX 92167383 92167528 -74482768 + B1_Mus1 SINE Alu 2 146 -2 4 1288 210 143 0 0 chrX 92167603 92167638 -74482658 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 1288 1076 95 0 13 chrX 92167660 92167810 -74482486 - B1_Mus1 SINE Alu 0 148 1 4 1288 1044 113 0 14 chrX 92168064 92168207 -74482089 + B1_Mus1 SINE Alu 2 142 -6 4 1288 1036 126 0 0 chrX 92168333 92168476 -74481820 - B1_Mus1 SINE Alu -5 143 1 4 1288 35 0 0 0 chrX 92168688 92168723 -74481573 + AT_rich Low_complexity Low_complexity 1 35 0 4 1288 781 161 0 0 chrX 92168745 92168869 -74481427 + B1_Mus1 SINE Alu 2 125 -23 4 1288 330 144 0 153 chrX 92168836 92168934 -74481362 + B1_Mur4 SINE Alu 66 148 -2 4 1288 188 35 35 0 chrX 92168991 92169020 -74481276 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 4 1288 1111 112 0 0 chrX 92169022 92169165 -74481131 - B1_Mus1 SINE Alu -5 143 1 4 1288 1021 120 14 14 chrX 92169440 92169584 -74480712 + B1_Mus1 SINE Alu 2 145 -3 4 1288 210 143 0 0 chrX 92169660 92169695 -74480601 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 1288 1003 115 0 13 chrX 92169721 92169871 -74480425 - B1_Mus1 SINE Alu 0 148 1 4 1288 1044 113 0 14 chrX 92170125 92170268 -74480028 + B1_Mus1 SINE Alu 2 142 -6 4 1288 1063 119 0 0 chrX 92170394 92170537 -74479759 - B1_Mus1 SINE Alu -5 143 1 4 1288 35 0 0 0 chrX 92170746 92170781 -74479515 + AT_rich Low_complexity Low_complexity 1 35 0 4 1288 781 161 0 0 chrX 92170803 92170927 -74479369 + B1_Mus1 SINE Alu 2 125 -23 4 1288 305 155 0 152 chrX 92170894 92170993 -74479303 + B1_Mur4 SINE Alu 66 149 -1 4 1288 1067 126 0 0 chrX 92171081 92171224 -74479072 - B1_Mus1 SINE Alu -5 143 1 4 1288 1028 113 0 14 chrX 92171498 92171641 -74478655 + B1_Mus1 SINE Alu 2 142 -6 4 1288 1100 110 0 0 chrX 92171745 92171891 -74478405 - B1_Mus1 SINE Alu -2 146 1 4 1288 30 27 0 0 chrX 92172100 92172137 -74478159 + AT_rich Low_complexity Low_complexity 1 37 0 4 1288 742 177 0 0 chrX 92172159 92172283 -74478013 + B1_Mus1 SINE Alu 2 125 -23 4 1288 344 153 0 150 chrX 92172250 92172350 -74477946 + B1_Mur4 SINE Alu 66 150 0 4 1288 1113 109 0 13 chrX 92172427 92172576 -74477720 - B1_Mus1 SINE Alu -1 147 1 4 1288 953 135 14 14 chrX 92172855 92172998 -74477298 + B1_Mus1 SINE Alu 4 146 -2 4 1288 210 143 0 0 chrX 92173073 92173108 -74477188 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 1288 968 122 0 13 chrX 92173134 92173284 -74477012 - B1_Mus1 SINE Alu 0 148 1 4 1288 1002 128 0 14 chrX 92173537 92173680 -74476616 + B1_Mus1 SINE Alu 2 142 -6 4 1288 1117 108 0 0 chrX 92173785 92173933 -74476363 - B1_Mus1 SINE Alu 0 148 1 4 1288 197 122 0 58 chrX 92174109 92174161 -74476135 + T-rich Low_complexity Low_complexity 1 49 0 4 1288 751 177 0 0 chrX 92174205 92174329 -74475967 + B1_Mus1 SINE Alu 2 125 -23 4 1288 350 141 0 150 chrX 92174296 92174396 -74475900 + B1_Mur4 SINE Alu 66 150 0 4 1288 1059 116 0 20 chrX 92174473 92174622 -74475674 - B1_Mm SINE Alu -1 146 1 4 1288 997 133 14 14 chrX 92174901 92175046 -74475250 + B1_Mus1 SINE Alu 2 146 -2 4 1288 223 171 24 0 chrX 92175115 92175156 -74475140 + CT-rich Low_complexity Low_complexity 2 43 0 4 1288 237 83 0 0 chrX 92175157 92175193 -74475103 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1288 1069 95 0 7 chrX 92175193 92175342 -74474954 - B1_Mus1 SINE Alu 0 148 1 4 1288 1039 114 0 14 chrX 92175596 92175738 -74474558 + B1_Mus1 SINE Alu 2 141 -7 4 1288 732 177 100 0 chrX 92175847 92175977 -74474319 - B1_Mus1 SINE Alu -5 143 1 4 1288 23 0 0 0 chrX 92176183 92176206 -74474090 + AT_rich Low_complexity Low_complexity 1 23 0 4 1288 844 152 14 20 chrX 92176241 92176389 -74473907 + B1_Mus1 SINE Alu 2 148 0 4 1288 221 0 35 0 chrX 92176443 92176472 -74473824 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 4 1288 1098 112 0 0 chrX 92176478 92176621 -74473675 - B1_Mus1 SINE Alu -5 143 1 4 1288 1013 114 0 14 chrX 92176898 92177040 -74473256 + B1_Mus1 SINE Alu 2 141 -7 4 1288 831 146 100 0 chrX 92177151 92177281 -74473015 - B1_Mus1 SINE Alu -5 143 1 4 1288 917 143 0 20 chrX 92177543 92177693 -74472603 + B1_Mus1 SINE Alu 2 148 0 4 1288 1057 126 0 0 chrX 92177774 92177917 -74472379 - B1_Mus1 SINE Alu -5 143 1 4 1288 1030 138 0 14 chrX 92178201 92178348 -74471948 + B1_Mus1 SINE Alu 2 146 -2 4 1288 189 0 0 0 chrX 92178349 92178370 -74471926 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 4 1288 264 59 0 0 chrX 92178427 92178461 -74471835 + (TC)n Simple_repeat Simple_repeat 2 35 0 4 1288 1010 118 21 0 chrX 92178476 92178620 -74471676 - B1_Mus1 SINE Alu -1 147 1 4 1288 263 221 12 102 chrX 92178715 92178881 -74471415 + T-rich Low_complexity Low_complexity 6 156 0 4 1288 953 161 0 7 chrX 92178902 92179046 -74471250 + B1_Mus1 SINE Alu 4 146 -2 4 1288 1095 256 29 16 chrX 92179046 92179352 -74470944 - RMER5 LTR ERV1 -179 355 46 4 1288 4812 121 48 64 chrX 92179354 92180240 -74470056 - RMER17A-int LTR ERVK -2 1726 855 4 1288 1236 56 0 0 chrX 92180241 92180385 -74469911 + B1_Mus2 SINE Alu 2 145 -2 4 1288 273 57 0 0 chrX 92180388 92180423 -74469873 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 4 1288 268 169 12 134 chrX 92180562 92180644 -74469652 - RMER17A-int LTR ERVK -949 779 708 4 1288 777 183 10 96 chrX 92180935 92181134 -74469162 - RMER17A-int LTR ERVK -1544 184 3 4 1288 5138 122 153 9 chrX 92181136 92181974 -74468322 - RMER17B LTR ERVK 0 958 1 4 1288 435 118 11 23 chrX 92182108 92182195 -74468101 + CT-rich Low_complexity Low_complexity 2 87 0 4 1288 3264 55 29 0 chrX 92182263 92182648 -74467648 + MTA_Mm LTR MaLR 1 396 0 4 1288 209 277 0 43 chrX 92183776 92183893 -74466403 + (TATAA)n Simple_repeat Simple_repeat 2 113 0 4 1288 713 203 93 12 chrX 92184478 92184678 -74465618 - Lx4B LINE L1 -5 7053 6751 4 1288 514 220 58 22 chrX 92184884 92185107 -74465189 + RMER17C LTR ERVK 180 410 0 4 1288 1253 183 103 49 chrX 92185109 92185459 -74464837 + RMER17C-int LTR ERVK 2 370 -2868 4 1288 321 169 0 0 chrX 92186260 92186319 -74463977 + A-rich Low_complexity Low_complexity 1 59 0 4 1288 375 212 34 34 chrX 92186496 92186584 -74463712 + RMER17C-int LTR ERVK 379 466 -2772 4 1288 1129 82 0 33 chrX 92187305 92187456 -74462840 - B1_Mus2 SINE Alu 0 147 2 4 1288 232 290 0 0 chrX 92188143 92188212 -74462084 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 1288 459 167 69 131 chrX 92188933 92189078 -74461218 + RLTR19-int LTR ERVK 3551 3686 -2451 4 1288 632 191 119 0 chrX 92189136 92189262 -74461034 - RLTR16 LTR ERVK -364 141 1 4 1288 716 250 110 43 chrX 92189461 92189762 -74460534 + RLTR19-int LTR ERVK 4039 4359 -1778 4 1288 2500 170 79 34 chrX 92189917 92190411 -74459885 - RMER20A LTR ERVK 0 516 1 4 1288 251 325 37 101 chrX 92190433 92190621 -74459675 + RMER10A LTR ERVL 18 193 -249 4 1288 22 56 0 0 chrX 92190623 92190659 -74459637 + AT_rich Low_complexity Low_complexity 1 36 0 4 1288 958 278 49 17 chrX 92190828 92191192 -74459104 + Lx7 LINE L1 5587 5960 -1684 4 1288 1261 48 0 0 chrX 92194723 92194869 -74455427 + B1_Mm SINE Alu 2 147 0 4 1288 246 295 0 32 chrX 92195649 92195712 -74454584 + ID4 SINE ID 4 64 -19 4 1288 36 23 0 0 chrX 92195721 92195764 -74454532 + AT_rich Low_complexity Low_complexity 1 43 0 4 1288 589 161 73 44 chrX 92195775 92195911 -74454385 - RMER4B LTR ERVK 0 585 446 4 1288 1584 54 16 0 chrX 92196209 92196394 -74453902 - B2_Mm2 SINE B2 -7 188 1 4 1288 3919 80 4 0 chrX 92196421 92196921 -74453375 + Lx LINE L1 5799 6300 -354 4 1288 667 140 28 0 chrX 92196916 92197023 -74453273 + Lx2 LINE L1 6775 6884 -113 4 1288 513 244 0 0 chrX 92197035 92197162 -74453134 - L1M2 LINE L1 -3046 3097 2971 4 1288 180 111 0 0 chrX 92197166 92197193 -74453103 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1288 302 235 47 12 chrX 92197213 92197299 -74452997 - MMTV-int LTR ERVK -5331 1922 1834 4 1288 2815 250 37 12 chrX 92197477 92198280 -74452016 + L1_Rod LINE L1 1789 2611 -3236 4 1288 2147 206 35 17 chrX 92198283 92198743 -74451553 + L1_Rod LINE L1 3810 4277 -1570 4 1288 3899 179 95 130 chrX 92198911 92199968 -74450328 + RMER1B Other Other 47 1066 0 4 1288 4120 197 31 51 chrX 92199967 92201031 -74449265 + L1_Rod LINE L1 4264 5306 -541 4 1288 241 231 37 49 chrX 92201034 92201116 -74449180 + L1_Rod LINE L1 5503 5583 -264 4 1288 253 252 293 9 chrX 92201117 92201233 -74449063 + MTC-int LTR MaLR 859 1007 -251 4 1288 297 330 61 28 chrX 92201563 92201744 -74448552 + L1M3c LINE L1 89 275 -6755 4 1288 874 134 7 0 chrX 92202122 92202264 -74448032 - URR1B DNA MER1_type 0 225 83 4 1288 457 320 94 42 chrX 92202681 92203171 -74447125 + L1M3c LINE L1 1890 2393 -4644 4 1288 189 0 0 0 chrX 92203171 92203192 -74447104 + (CAA)n Simple_repeat Simple_repeat 1 21 0 4 1288 457 320 94 42 chrX 92203192 92203297 -74446999 + L1M3c LINE L1 2394 2516 -4521 4 1288 250 283 11 0 chrX 92203652 92203744 -74446552 + L1M3c LINE L1 5919 6011 -1092 4 1288 667 111 10 48 chrX 92203745 92203849 -74446447 - B1_Mus1 SINE Alu -47 101 2 4 1288 307 291 101 0 chrX 92203907 92204086 -74446210 + L1M3c LINE L1 6086 6282 -821 4 1288 601 278 78 43 chrX 92204099 92204445 -74445851 + L1M3c LINE L1 6326 6683 -577 4 1288 4169 146 103 68 chrX 92204456 92205314 -74444982 - RMER19B LTR ERVK -14 888 1 4 1288 273 261 68 40 chrX 92205314 92205462 -74444834 + L1P5 LINE L1 5719 5870 -286 4 1288 942 212 27 79 chrX 92205479 92205807 -74444489 + RLTR15 LTR ERVK 33 343 -16 4 1288 1204 81 40 0 chrX 92205815 92205988 -74444308 - Lx2 LINE L1 -43 6954 6775 4 1288 6630 119 66 2 chrX 92205987 92207322 -74442974 - Lx2 LINE L1 -352 6645 5250 4 1288 320 94 19 0 chrX 92207478 92207531 -74442765 + (CAAAG)n Simple_repeat Simple_repeat 1 54 0 4 1288 427 186 0 29 chrX 92207653 92207758 -74442538 + Lx6 LINE L1 7358 7459 -1 4 1288 6718 123 22 7 chrX 92208277 92209264 -74441032 + Lx2 LINE L1 5996 6997 0 4 1288 2582 135 12 15 chrX 92209576 92209982 -74440314 - MTC LTR MaLR -13 408 4 4 1288 411 215 0 0 chrX 92210291 92210370 -74439926 + Lx6 LINE L1 6743 6821 -639 4 1288 2420 214 44 15 chrX 92210360 92210840 -74439456 + Lx6 LINE L1 6923 7416 -44 4 1288 308 161 16 0 chrX 92210929 92210991 -74439305 + GA-rich Low_complexity Low_complexity 2 64 0 4 1288 396 0 0 0 chrX 92212231 92212275 -74438021 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 1288 606 14 0 0 chrX 92213125 92213196 -74437100 + (GAAA)n Simple_repeat Simple_repeat 3 73 0 5 1288 769 187 42 21 chrX 92213198 92213322 -74436974 + B3 SINE B2 8 134 -82 5 1288 3592 118 62 35 chrX 92213322 92213947 -74436349 - RLTR26 LTR ERVK 0 642 1 5 1288 6993 84 33 13 chrX 92213951 92214881 -74435415 - MERVK26-int LTR ERVK -2 6917 5969 5 1288 1150 266 45 7 chrX 92216287 92216575 -74433721 + Lx6 LINE L1 7026 7324 -136 5 1288 540 45 0 0 chrX 92216576 92216643 -74433653 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 5 1288 1092 31 62 0 chrX 92216643 92216772 -74433524 - B1_Mm SINE Alu -10 137 1 5 1288 6491 121 13 19 chrX 92216787 92217768 -74432528 + Lx2 LINE L1 6022 6996 -1 5 1288 189 0 0 0 chrX 92217774 92217795 -74432501 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 5 1288 21 36 0 0 chrX 92217868 92217896 -74432400 + AT_rich Low_complexity Low_complexity 1 28 0 5 1288 580 307 97 17 chrX 92218620 92219153 -74431143 + L1M5 LINE L1 3746 4319 -1827 5 1288 360 310 128 36 chrX 92219580 92219831 -74430465 + L1M5 LINE L1 4887 5160 -986 5 1288 188 88 0 56 chrX 92222307 92222343 -74427953 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1288 876 135 0 54 chrX 92222777 92222926 -74427370 - B1_Mus2 SINE Alu -6 141 1 5 1288 738 203 28 7 chrX 92222953 92223097 -74427199 - RMER5 LTR ERV1 0 534 388 5 1288 352 312 15 74 chrX 92223176 92223311 -74426985 - RSINE1 SINE B4 -37 128 2 5 1288 906 335 36 34 chrX 92223311 92223667 -74426629 - RMER5 LTR ERV1 -137 397 41 5 1288 1588 268 65 17 chrX 92223978 92224453 -74425843 - Lx7 LINE L1 -345 7351 6854 5 1288 1609 122 205 3 chrX 92224463 92224751 -74425545 + ORR1A2 LTR MaLR 1 346 0 5 1288 6131 87 30 2 chrX 92224761 92225639 -74424657 + ORR1A2-int LTR MaLR 1062 1963 0 5 1288 2325 76 13 9 chrX 92225639 92225957 -74424339 + ORR1A2 LTR MaLR 1 319 -8 5 1288 1996 255 18 16 chrX 92225966 92226457 -74423839 - Lx7 LINE L1 -927 6769 6278 5 1288 1939 225 30 80 chrX 92226633 92227346 -74422950 - Lx7 LINE L1 -1463 6233 5540 5 1288 3298 58 2 2 chrX 92227371 92227785 -74422511 - L1_Mus1 LINE L1 0 6567 6154 5 1288 897 18 0 0 chrX 92227785 92227894 -74422402 - L1_Mus3 LINE L1 -764 5874 5766 5 1288 1144 129 300 0 chrX 92227950 92228203 -74422093 + ORR1B1 LTR MaLR 1 329 0 5 1288 608 177 18 9 chrX 92228214 92228328 -74421968 + MT2A LTR ERVL 3 117 -416 5 1288 504 0 0 0 chrX 92228396 92228452 -74421844 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1288 3198 132 35 6 chrX 92228469 92229011 -74421285 - Lx4B LINE L1 -36 7022 6465 5 1288 498 116 68 23 chrX 92229020 92229108 -74421188 - Lx4B LINE L1 -224 6834 6743 5 1288 1106 125 6 6 chrX 92229160 92229337 -74420959 - Lx4B LINE L1 -597 6461 6285 5 1288 1548 112 36 18 chrX 92229335 92229616 -74420680 + Lx4A LINE L1 5894 6179 -879 5 1288 1041 262 55 86 chrX 92229617 92230111 -74420185 + MT2B LTR ERVL 63 592 -9 5 1288 201 154 0 0 chrX 92230114 92230153 -74420143 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1288 1317 200 21 62 chrX 92230175 92230240 -74420056 - L1_Mur3 LINE L1 -2810 3070 3011 5 1288 2063 129 20 111 chrX 92230240 92230692 -74419604 + RLTR9F LTR ERVK 1 411 -4 5 1288 1317 200 21 62 chrX 92230692 92230999 -74419297 - L1_Mur3 LINE L1 -2870 3010 2713 5 1288 985 270 68 2 chrX 92230998 92231527 -74418769 - L1_Mur3 LINE L1 -4466 1414 855 5 1288 207 0 0 0 chrX 92232093 92232116 -74418180 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1288 513 0 0 0 chrX 92232116 92232172 -74418124 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 1288 193 310 109 25 chrX 92232523 92232642 -74417654 + L2c LINE L2 3258 3386 -1 5 1288 3310 135 25 62 chrX 92233211 92233892 -74416404 - Lx4B LINE L1 -350 6708 6053 5 1288 1841 243 57 24 chrX 92233931 92234484 -74415812 - L1_Mur3 LINE L1 -1504 4376 3805 5 1288 1094 143 64 5 chrX 92234484 92234565 -74415731 - Lx2 LINE L1 -1 6996 6912 5 1288 3082 20 0 0 chrX 92234565 92234911 -74415385 + ORR1A0 LTR MaLR 1 346 0 5 1288 1094 143 64 5 chrX 92234911 92235047 -74415249 - Lx2 LINE L1 -86 6911 6767 5 1288 1841 243 57 24 chrX 92235047 92235172 -74415124 - L1_Mur3 LINE L1 -2076 3804 3676 5 1288 1559 287 58 45 chrX 92235199 92236455 -74413841 - L1_Mur3 LINE L1 -3162 2685 1379 5 1288 6778 163 42 45 chrX 92236495 92237929 -74412367 + RLTR21 LTR ERVK 1 1404 0 5 1288 4762 59 24 0 chrX 92238631 92239405 -74410891 + L1Md_F2 LINE L1 5449 6236 -346 5 1288 395 91 12 38 chrX 92239410 92239490 -74410806 + L1Md_F2 LINE L1 6502 6579 -3 5 1288 257 180 150 83 chrX 92239491 92239624 -74410672 - L1MB5 LINE L1 -8 6176 6035 5 1288 331 249 180 16 chrX 92239745 92239990 -74410306 - L1MB5 LINE L1 -206 5968 5684 5 1288 369 0 0 0 chrX 92240094 92240135 -74410161 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 1288 299 191 0 0 chrX 92241052 92241120 -74409176 - L1_Rod LINE L1 -4537 1310 1243 5 1288 469 253 54 31 chrX 92241101 92241325 -74408971 - L1_Rod LINE L1 -6480 1128 900 5 1288 324 333 8 25 chrX 92241964 92242084 -74408212 + MLT1I LTR MaLR 292 409 -2 5 1288 228 111 0 0 chrX 92243101 92243137 -74407159 + (TGGGGG)n Simple_repeat Simple_repeat 1 36 0 5 1288 429 20 0 0 chrX 92244201 92244251 -74406045 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1288 189 171 0 0 chrX 92247036 92247071 -74403225 + (TATG)n Simple_repeat Simple_repeat 4 38 0 5 1288 204 125 0 0 chrX 92247124 92247156 -74403140 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1288 228 130 0 0 chrX 92247156 92247202 -74403094 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1288 180 0 0 0 chrX 92247205 92247225 -74403071 + (TA)n Simple_repeat Simple_repeat 1 20 0 5 1288 32 0 0 0 chrX 92247262 92247294 -74403002 + AT_rich Low_complexity Low_complexity 1 32 0 5 1288 25 31 0 0 chrX 92247672 92247704 -74402592 + AT_rich Low_complexity Low_complexity 1 32 0 5 1288 356 0 0 22 chrX 92247864 92247909 -74402387 + (TAAAA)n Simple_repeat Simple_repeat 3 46 0 5 1288 218 388 66 8 chrX 92247930 92248052 -74402244 - MIR3 SINE MIR -67 141 13 5 1288 537 273 156 3 chrX 92248634 92248961 -74401335 - L1MD LINE L1 -1100 5046 4670 5 1288 260 295 82 44 chrX 92249555 92249690 -74400606 + MIRb SINE MIR 104 243 -25 5 1288 25 31 0 0 chrX 92249932 92249964 -74400332 + AT_rich Low_complexity Low_complexity 1 32 0 5 1288 880 288 46 11 chrX 92250470 92250907 -74399389 + Lx7 LINE L1 5421 5909 -1787 5 1288 715 223 43 13 chrX 92251080 92251312 -74398984 - L1M2 LINE L1 -802 5498 5260 5 1288 876 265 160 6 chrX 92251842 92252343 -74397953 + L1MA6 LINE L1 5663 6240 -60 5 1288 212 120 20 0 chrX 92252782 92252832 -74397464 + (CAAAAA)n Simple_repeat Simple_repeat 2 52 0 5 1288 21 36 0 0 chrX 92253074 92253102 -74397194 + AT_rich Low_complexity Low_complexity 1 28 0 5 1288 1300 24 24 0 chrX 92253151 92253317 -74396979 + L1Md_F3 LINE L1 6413 6582 -2 5 1288 309 350 55 23 chrX 92253793 92254012 -74396284 + LTR82B Low_complexity ERVL 519 744 -86 5 1288 2720 208 18 0 chrX 92254577 92255092 -74395204 + Lx5 LINE L1 6527 7050 0 5 1288 1180 217 92 0 chrX 92255950 92256199 -74394097 - MTD LTR MaLR -2 417 146 5 1288 505 271 47 18 chrX 92256291 92256460 -74393836 + Lx8 LINE L1 6529 6702 -771 5 1288 334 341 47 0 chrX 92257401 92257530 -74392766 + MIRc SINE MIR 16 150 -118 5 1288 255 349 0 0 chrX 92258792 92258878 -74391418 - MIR SINE MIR -21 241 156 5 1288 190 361 0 53 chrX 92258925 92259001 -74391295 - MIR SINE MIR -186 76 5 5 1288 674 284 29 5 chrX 92259506 92259711 -74390585 - B3 SINE B2 -6 210 1 5 1288 250 347 76 43 chrX 92260626 92260810 -74389486 - MIRb SINE MIR -55 213 24 5 1288 629 264 158 6 chrX 92260868 92261032 -74389264 + ID_B1 SINE B4 1 189 -35 5 1288 269 269 15 15 chrX 92261245 92261313 -74388983 + ID4_ SINE ID 3 70 -13 5 1288 2582 189 79 84 chrX 92262066 92262772 -74387524 - RMER1B Other Other -1 1065 363 5 1288 6575 50 43 2 chrX 92262998 92263876 -74386420 - L1_Mus1 LINE L1 0 6567 5654 5 1288 1667 16 0 5 chrX 92264402 92264593 -74385703 - B2_Mm1a SINE B2 -2 191 2 5 1288 367 303 0 10 chrX 92265038 92265138 -74385158 + CT-rich Low_complexity Low_complexity 3 101 0 5 1288 1207 65 322 0 chrX 92266810 92267024 -74383272 - L1_Mus3 LINE L1 -495 6143 5861 5 1288 2564 86 8 8 chrX 92267024 92267399 -74382897 + L1_Mus3 LINE L1 6260 6634 -4 5 1288 436 99 0 27 chrX 92267399 92267410 -74382886 - Lx2B LINE L1 -1140 5860 5851 5 1288 479 313 45 0 chrX 92268646 92268780 -74381516 - B1F SINE Alu -7 142 3 5 1288 2650 199 26 27 chrX 92268780 92269136 -74381160 + RMER19B LTR ERVK 390 749 -153 5 1288 2347 64 0 0 chrX 92269136 92269434 -74380862 + L1_Mus2 LINE L1 6269 6566 0 5 1288 2650 199 26 27 chrX 92269434 92269562 -74380734 + RMER19B LTR ERVK 750 873 -29 5 1288 1574 27 21 11 chrX 92269562 92269752 -74380544 + B2_Mm1a SINE B2 2 193 0 5 1288 387 293 254 5 chrX 92270305 92270625 -74379671 + L2a LINE L2 2825 3207 -219 5 1288 262 275 0 68 chrX 92270968 92271042 -74379254 - RMER30 DNA MER1_type -1 201 133 5 1288 480 293 36 0 chrX 92273302 92273442 -74376854 + MIR SINE MIR 2 146 -116 5 1288 253 236 27 14 chrX 92274610 92274683 -74375613 - Charlie5 DNA MER1_type -2515 109 36 5 1289 588 29 0 0 chrX 92275499 92275569 -74374727 + (TA)n Simple_repeat Simple_repeat 2 71 0 5 1289 21 0 0 0 chrX 92275669 92275690 -74374606 + AT_rich Low_complexity Low_complexity 1 21 0 5 1289 482 31 0 0 chrX 92275740 92275804 -74374492 + L1_Mus2 LINE L1 6503 6566 0 5 1289 342 304 78 31 chrX 92276070 92276199 -74374097 + B1_Mur1 SINE Alu 5 139 -10 5 1289 263 177 0 16 chrX 92276204 92276267 -74374029 + GA-rich Low_complexity Low_complexity 2 63 0 5 1289 196 250 140 18 chrX 92276681 92276738 -74373558 - MIRc SINE MIR -88 180 117 5 1289 25 0 0 0 chrX 92277169 92277194 -74373102 + AT_rich Low_complexity Low_complexity 1 25 0 5 1289 189 195 0 0 chrX 92277743 92277784 -74372512 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 1289 6037 254 103 78 chrX 92278803 92279320 -74370976 + Lx9 LINE L1 1562 2077 -3770 5 1289 288 0 0 0 chrX 92279320 92279352 -74370944 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1289 6037 254 103 78 chrX 92279352 92280867 -74369429 + Lx9 LINE L1 2078 3639 -2208 5 1289 3085 99 87 8 chrX 92280867 92281337 -74368959 - Lx3B LINE L1 -4 6969 6463 5 1289 6037 254 103 78 chrX 92281337 92282729 -74367567 + Lx9 LINE L1 3640 5072 -775 5 1289 297 0 0 0 chrX 92282729 92282762 -74367534 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 1289 6037 257 101 63 chrX 92282762 92283886 -74366410 + Lx9 LINE L1 5073 6407 -1237 5 1289 438 20 0 0 chrX 92283886 92283937 -74366359 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 5 1289 1034 247 130 49 chrX 92283937 92284084 -74366212 + Lx9 LINE L1 6408 6554 -1090 5 1289 290 339 0 0 chrX 92284085 92284150 -74366146 - B4 SINE B4 -142 150 86 5 1289 1423 272 44 57 chrX 92284372 92285003 -74365293 + Lx9 LINE L1 7020 7642 -2 5 1289 524 294 0 0 chrX 92285022 92285141 -74365155 + B1_Mur1 SINE Alu 7 125 -24 5 1289 5571 68 27 0 chrX 92285156 92285895 -74364401 - Lx3B LINE L1 -173 5713 4955 6 1289 7754 120 28 23 chrX 92285894 92287125 -74363171 + Lx3B LINE L1 5732 6969 -4 6 1289 234 259 83 0 chrX 92287172 92287280 -74363016 + L1M5 LINE L1 4314 4430 -1716 6 1289 1016 181 70 14 chrX 92287534 92287747 -74362549 - URR1B DNA MER1_type 0 225 1 6 1289 403 184 20 0 chrX 92288744 92288842 -74361454 + Lx5 LINE L1 6934 7033 -17 6 1289 603 307 83 21 chrX 92288863 92289442 -74360854 + L1M3c LINE L1 1267 1794 -4519 6 1289 23 54 0 0 chrX 92289802 92289839 -74360457 + AT_rich Low_complexity Low_complexity 1 37 0 6 1289 211 269 192 0 chrX 92289850 92289902 -74360394 - PB1 SINE Alu -17 110 49 6 1289 239 265 20 0 chrX 92289857 92289906 -74360390 - 4.5SRNA scRNA scRNA -4 90 41 6 1289 382 275 14 48 chrX 92290288 92290433 -74359863 + CT-rich Low_complexity Low_complexity 6 145 0 6 1289 795 212 16 52 chrX 92290900 92291094 -74359202 - MTD LTR MaLR 0 419 233 6 1289 1253 210 59 24 chrX 92291094 92291431 -74358865 - L1_Rod LINE L1 -338 5509 5161 6 1289 549 80 0 0 chrX 92291437 92291512 -74358784 + (TA)n Simple_repeat Simple_repeat 1 75 0 6 1289 5570 80 69 91 chrX 92291514 92292481 -74357815 + Lx3_Mus LINE L1 6060 7005 -4 6 1289 2829 174 79 20 chrX 92292509 92293119 -74357177 + Lx9 LINE L1 6983 7628 -16 6 1289 24 0 0 0 chrX 92293558 92293582 -74356714 + AT_rich Low_complexity Low_complexity 1 24 0 6 1289 841 272 129 55 chrX 92294224 92294675 -74355621 + Lx9 LINE L1 6180 6663 -981 6 1289 334 329 73 49 chrX 92294682 92294928 -74355368 + L1ME1 LINE L1 5919 6170 -9 6 1289 341 314 28 14 chrX 92294973 92295115 -74355181 + L1M4 LINE L1 3764 3907 -2239 6 1289 884 319 68 0 chrX 92295525 92295791 -74354505 + MER68 LTR ERVL 7 290 -273 6 1289 1630 119 14 24 chrX 92296572 92296864 -74353432 - Lx4A LINE L1 0 7058 6770 6 1289 1042 127 6 18 chrX 92296864 92297028 -74353268 + Lx4A LINE L1 6605 6767 -291 6 1289 329 312 13 13 chrX 92297234 92297312 -74352984 + ID4 SINE ID 1 78 -5 6 1289 298 255 99 30 chrX 92297480 92297581 -74352715 - PB1D10 SINE Alu -9 108 1 6 1289 960 141 53 16 chrX 92298148 92298336 -74351960 - Lx3A LINE L1 0 6981 6787 6 1289 1310 171 34 130 chrX 92298352 92298736 -74351560 - Lx7 LINE L1 0 7696 7350 6 1289 34 55 0 0 chrX 92298776 92298831 -74351465 + AT_rich Low_complexity Low_complexity 1 55 0 6 1289 993 206 150 4 chrX 92298831 92299065 -74351231 - Lx7 LINE L1 -334 7362 7095 6 1289 4092 162 19 93 chrX 92299071 92299333 -74350963 - Lx7 LINE L1 -1730 5966 5754 6 1289 2485 43 3 0 chrX 92299333 92299638 -74350658 - L1_Mus1 LINE L1 -2 6565 6260 6 1289 4092 149 21 74 chrX 92299638 92300132 -74350164 - Lx7 LINE L1 -127 5753 5256 6 1289 194 0 39 0 chrX 92300132 92300158 -74350138 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1289 4092 149 21 74 chrX 92300158 92300332 -74349964 - Lx7 LINE L1 -625 5255 5078 6 1289 319 280 10 29 chrX 92300389 92300492 -74349804 - L1M2 LINE L1 -798 5345 5245 6 1289 2158 264 61 35 chrX 92300493 92301355 -74348941 + Lx9 LINE L1 5375 6430 -1214 6 1289 192 40 0 0 chrX 92301355 92301380 -74348916 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 6 1289 2158 257 101 48 chrX 92301380 92301652 -74348644 + Lx9 LINE L1 6431 6703 -941 6 1289 343 0 43 0 chrX 92301652 92301699 -74348597 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1289 2158 257 101 48 chrX 92301699 92302066 -74348230 + Lx9 LINE L1 6704 7114 -530 6 1289 7580 78 20 7 chrX 92302097 92303195 -74347101 + L1_Mus3 LINE L1 5527 6637 -1 6 1289 888 296 45 7 chrX 92303191 92303477 -74346819 + Lx9 LINE L1 7100 7396 -248 6 1289 372 284 46 32 chrX 92303731 92303838 -74346458 - B1F SINE Alu -1 126 12 6 1289 221 292 118 49 chrX 92303904 92304048 -74346248 + L3b LINE CR1 261 414 -68 6 1289 190 381 78 23 chrX 92304410 92304539 -74345757 - MIR SINE MIR -55 153 18 6 1289 21 36 0 0 chrX 92304877 92304905 -74345391 + AT_rich Low_complexity Low_complexity 1 28 0 6 1289 21 0 0 0 chrX 92304988 92305009 -74345287 + AT_rich Low_complexity Low_complexity 1 21 0 6 1289 326 339 88 26 chrX 92305011 92305205 -74345091 - L2a LINE L2 -16 3410 3205 6 1289 372 391 52 12 chrX 92305265 92305516 -74344780 - L2a LINE L2 -340 3079 2819 6 1289 454 235 174 0 chrX 92305638 92305753 -74344543 - MER5A1 DNA MER1_type -3 163 29 6 1289 295 281 0 0 chrX 92305894 92305958 -74344338 + tRNA-Ala-GCY_ tRNA tRNA 4 67 -8 6 1289 248 380 19 101 chrX 92305986 92306194 -74344102 - MIRb SINE MIR -73 195 5 6 1289 337 291 38 50 chrX 92306287 92306446 -74343850 - MER3 DNA MER1_type -1 208 52 6 1289 1013 218 56 0 chrX 92306657 92306854 -74343442 + B3 SINE B2 2 209 -7 6 1289 208 349 21 64 chrX 92307133 92307320 -74342976 + MER5A DNA MER1_type 1 179 -10 6 1289 506 289 26 0 chrX 92308930 92309044 -74341252 - B1_Mur2 SINE Alu -32 117 1 6 1289 301 203 86 14 chrX 92309119 92309189 -74341107 + MTD LTR MaLR 306 380 -39 6 1289 290 26 0 25 chrX 92309260 92309300 -74340996 + (TA)n Simple_repeat Simple_repeat 2 40 0 6 1289 608 333 16 21 chrX 92309936 92310123 -74340173 + ORR1E LTR MaLR 7 192 -167 6 1289 269 208 21 3 chrX 92310125 92310193 -74340103 + Lx8 LINE L1 5127 5249 -897 6 1289 881 299 34 7 chrX 92310191 92310529 -74339767 + Lx8 LINE L1 5533 5913 -1560 6 1289 3980 264 94 27 chrX 92310846 92312164 -74338132 + Lx8 LINE L1 6050 7456 -17 6 1289 194 91 30 0 chrX 92313459 92313492 -74336804 + (TTTC)n Simple_repeat Simple_repeat 2 35 0 6 1289 1066 64 43 0 chrX 92313497 92313638 -74336658 - B1_Mus1 SINE Alu 0 148 2 6 1289 285 367 41 15 chrX 92313725 92313959 -74336337 - MIR SINE MIR -11 257 14 6 1289 21 82 0 0 chrX 92314190 92314239 -74336057 + AT_rich Low_complexity Low_complexity 1 49 0 6 1289 752 103 0 0 chrX 92314246 92314362 -74335934 - Lx2 LINE L1 -14 6983 6868 6 1289 426 279 29 9 chrX 92314532 92314637 -74335659 + PB1D10 SINE Alu 5 111 -6 6 1289 234 174 0 0 chrX 92315185 92315231 -74335065 + (TA)n Simple_repeat Simple_repeat 1 46 0 6 1289 201 74 0 0 chrX 92315275 92315302 -74334994 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 1289 1971 255 97 56 chrX 92315303 92316246 -74334050 - Lx8 LINE L1 -1306 6167 5201 6 1289 1455 170 63 49 chrX 92316740 92317024 -74333272 - MTC LTR MaLR 0 421 134 6 1289 614 222 56 45 chrX 92317727 92317906 -74332390 - B3A SINE B2 -15 183 3 6 1289 915 299 23 92 chrX 92318248 92318554 -74331742 - B4A SINE B4 0 292 8 6 1289 548 289 0 53 chrX 92318723 92318873 -74331423 - RSINE1 SINE B4 -20 145 4 6 1289 269 208 39 0 chrX 92319620 92319697 -74330599 + MER33 DNA MER1_type 227 306 -18 6 1289 708 159 255 0 chrX 92319761 92319918 -74330378 - URR1A DNA MER1_type -29 197 1 6 1289 3134 27 0 0 chrX 92320244 92320612 -74329684 + L1Md_A LINE L1 6215 6582 0 6 1289 22 0 0 0 chrX 92320612 92320634 -74329662 + AT_rich Low_complexity Low_complexity 1 22 0 6 1289 504 289 58 50 chrX 92320713 92320953 -74329343 - Lx7 LINE L1 -1837 5859 5618 6 1289 996 307 76 4 chrX 92320953 92321228 -74329068 + MTEb LTR MaLR 1 295 -84 6 1289 612 304 87 68 chrX 92321208 92321473 -74328823 + MTD LTR MaLR 6 275 -144 6 1289 2155 73 13 35 chrX 92321473 92321715 -74328581 - L1_Mus3 LINE L1 -605 6033 5798 6 1289 3353 55 16 2 chrX 92321715 92322149 -74328147 - L1_Mus2 LINE L1 0 6566 6127 6 1289 2155 73 13 35 chrX 92322149 92322220 -74328076 - L1_Mus3 LINE L1 -841 5797 5727 6 1289 3878 82 9 9 chrX 92322220 92322759 -74327537 + L1_Mus3 LINE L1 6088 6626 -12 6 1289 949 162 50 100 chrX 92322764 92322929 -74327367 + MTD LTR MaLR 197 358 -61 6 1289 1827 171 31 11 chrX 92322929 92323283 -74327013 + Lx4B LINE L1 6698 7058 0 6 1289 949 162 50 100 chrX 92323283 92323337 -74326959 + MTD LTR MaLR 359 405 -14 6 1289 400 294 20 0 chrX 92323347 92323449 -74326847 + MTD LTR MaLR 261 364 -15 6 1289 489 264 57 142 chrX 92323470 92323633 -74326663 - L1M2 LINE L1 -673 5624 5485 6 1289 522 0 0 0 chrX 92323633 92323691 -74326605 + (TC)n Simple_repeat Simple_repeat 2 59 0 6 1289 489 264 57 142 chrX 92323691 92323858 -74326438 - L1M2 LINE L1 -813 5484 5322 6 1289 194 335 163 28 chrX 92324630 92324808 -74325488 - MIRb SINE MIR -44 224 23 6 1289 327 250 52 13 chrX 92324980 92325057 -74325239 + ID4 SINE ID 1 80 -3 6 1289 263 346 12 12 chrX 92325685 92325846 -74324450 + A-rich Low_complexity Low_complexity 5 165 0 6 1289 229 230 0 96 chrX 92325966 92326091 -74324205 + A-rich Low_complexity Low_complexity 3 115 0 6 1289 258 330 27 36 chrX 92327862 92327984 -74322312 - MIRc SINE MIR -95 167 47 6 1289 1036 81 44 0 chrX 92328078 92328238 -74322058 - L1Md_F2 LINE L1 -2 6580 6414 6 1289 195 231 0 0 chrX 92328320 92328359 -74321937 - L3b LINE CR1 -259 223 185 6 1289 991 280 44 72 chrX 92328364 92328726 -74321570 + ORR1E LTR MaLR 1 352 -7 6 1289 207 0 0 0 chrX 92328730 92328753 -74321543 + (CAA)n Simple_repeat Simple_repeat 1 23 0 6 1289 25 31 0 0 chrX 92329209 92329241 -74321055 + AT_rich Low_complexity Low_complexity 1 32 0 6 1289 182 137 73 73 chrX 92329329 92329384 -74320912 - L2a LINE L2 0 3426 3372 6 1289 278 297 75 47 chrX 92329586 92329692 -74320604 + MIRb SINE MIR 120 228 -40 6 1289 225 248 170 113 chrX 92330567 92330708 -74319588 - MER5A1 DNA MER1_type 0 166 18 6 1289 936 236 39 10 chrX 92331092 92331297 -74318999 + B3 SINE B2 1 211 -5 6 1289 1229 41 0 0 chrX 92331443 92331589 -74318707 + B1_Mus2 SINE Alu 2 147 0 6 1289 270 56 0 0 chrX 92331863 92331899 -74318397 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1289 456 51 0 0 chrX 92331899 92331958 -74318338 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1289 729 274 16 31 chrX 92331972 92332164 -74318132 - B3A SINE B2 -5 193 5 6 1289 724 347 50 0 chrX 92332165 92332387 -74317909 - B4A SINE B4 -59 233 1 6 1289 274 344 0 21 chrX 92333196 92333291 -74317005 - BC1_Mm scRNA scRNA -55 97 5 6 1289 22 0 0 0 chrX 92335549 92335571 -74314725 + AT_rich Low_complexity Low_complexity 1 22 0 6 1289 6857 232 81 12 chrX 92336439 92336821 -74313475 + Lx9 LINE L1 1015 1437 -4410 6 1289 261 0 0 0 chrX 92336821 92336850 -74313446 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1289 6857 248 65 71 chrX 92336850 92340572 -74309724 + Lx9 LINE L1 1438 4841 -1039 6 1289 495 0 0 0 chrX 92340572 92340627 -74309669 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1289 3954 248 156 100 chrX 92340627 92341985 -74308311 + Lx9 LINE L1 4842 6456 -1188 6 1289 4494 32 6 2 chrX 92341985 92342525 -74307771 - L1Md_F3 LINE L1 -8 6576 6035 6 1289 1867 212 251 84 chrX 92342525 92342924 -74307372 + Lx9 LINE L1 6457 6865 -779 6 1289 1430 230 84 30 chrX 92342923 92343389 -74306907 + Lx9 LINE L1 6968 7458 -186 6 1289 1063 248 160 28 chrX 92343420 92343935 -74306361 + Lx9 LINE L1 6327 6909 -735 7 1289 1385 251 118 30 chrX 92343954 92344512 -74305784 + Lx9 LINE L1 7016 7622 -22 7 1289 1624 195 32 112 chrX 92344923 92345291 -74305005 + MTE2b LTR MaLR 3 342 -37 7 1289 1582 166 78 48 chrX 92345291 92345664 -74304632 + ORR1C2 LTR MaLR 1 384 0 7 1289 1624 195 32 112 chrX 92345664 92345705 -74304591 + MTE2b LTR MaLR 343 379 0 7 1289 900 125 0 18 chrX 92347413 92347576 -74302720 + (GGA)n Simple_repeat Simple_repeat 3 162 0 7 1289 855 156 11 11 chrX 92347540 92347715 -74302581 + GA-rich Low_complexity Low_complexity 4 178 0 7 1289 25 31 0 0 chrX 92348133 92348165 -74302131 + AT_rich Low_complexity Low_complexity 1 32 0 7 1289 1394 60 0 0 chrX 92348169 92348354 -74301942 - L1_Mus2 LINE L1 -1 6565 6381 7 1289 2290 62 10 0 chrX 92348354 92348662 -74301634 + L1_Mus2 LINE L1 5800 6110 -456 7 1289 3116 75 0 5 chrX 92348878 92349280 -74301016 + MTB LTR MaLR 1 400 0 7 1289 678 207 20 14 chrX 92349855 92350002 -74300294 - B1F SINE Alu -1 148 1 7 1289 524 229 42 84 chrX 92350713 92350745 -74299551 + ID_B1 SINE B4 62 221 -3 7 1289 988 30 0 64 chrX 92350745 92350880 -74299416 + B1_Mm SINE Alu 16 142 -5 7 1289 185 0 40 0 chrX 92350880 92350905 -74299391 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7 1289 209 268 59 35 chrX 92351689 92351774 -74298522 + MIR3 SINE MIR 91 177 -31 7 1289 195 69 0 0 chrX 92352906 92352935 -74297361 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1289 22 0 0 0 chrX 92353556 92353578 -74296718 + AT_rich Low_complexity Low_complexity 1 22 0 7 1289 184 303 54 108 chrX 92354352 92354463 -74295833 - MIR3 SINE MIR -18 190 86 7 1289 327 301 89 0 chrX 92354548 92354671 -74295625 - MER2B DNA MER2_type -1 335 202 7 1289 193 327 115 26 chrX 92355036 92355149 -74295147 + MER5B DNA MER1_type 44 166 -12 7 1289 187 408 110 0 chrX 92355369 92355560 -74294736 + L3 LINE CR1 3250 3461 -1028 7 1289 188 328 47 23 chrX 92356542 92356670 -74293626 + MIRc SINE MIR 116 246 -22 7 1289 252 59 0 0 chrX 92357272 92357306 -74292990 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 1289 255 61 0 0 chrX 92358634 92358667 -74291629 + (CCA)n Simple_repeat Simple_repeat 2 34 0 7 1289 260 325 24 18 chrX 92362084 92362253 -74288043 + GA-rich Low_complexity Low_complexity 4 173 0 7 1289 270 250 39 33 chrX 92363190 92363343 -74286953 + L1MC5 LINE L1 7292 7445 -516 7 1289 432 219 123 33 chrX 92363560 92363755 -74286541 + L1M4 LINE L1 5084 5288 -858 7 1289 306 0 0 0 chrX 92363755 92363789 -74286507 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 1289 432 219 123 33 chrX 92363789 92363805 -74286491 + L1M4 LINE L1 5289 5313 -833 7 1289 313 327 46 26 chrX 92363805 92363956 -74286340 + RSINE1 SINE B4 3 156 -9 7 1289 580 280 8 0 chrX 92363988 92364113 -74286183 + RSINE1 SINE B4 5 130 -35 7 1289 719 227 56 138 chrX 92364128 92364745 -74285551 + L1M4 LINE L1 5282 5823 -361 7 1289 531 0 0 0 chrX 92364976 92365035 -74285261 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 7 1289 487 167 101 30 chrX 92365036 92365135 -74285161 - PB1D9 SINE Alu -14 106 1 7 1289 940 61 8 8 chrX 92365139 92365327 -74284969 - L1Md_F2 LINE L1 0 6582 6431 7 1289 651 26 0 0 chrX 92365412 92365489 -74284807 + (TATATG)n Simple_repeat Simple_repeat 2 78 0 7 1289 1549 209 112 8 chrX 92365498 92365864 -74284432 + MTD LTR MaLR 1 404 -15 7 1289 215 386 81 4 chrX 92366288 92366522 -74283774 + L2c LINE L2 2344 2595 -824 7 1289 311 349 33 44 chrX 92367338 92367521 -74282775 + L2c LINE L2 2817 2997 -422 7 1289 217 246 0 47 chrX 92367582 92367646 -74282650 + L2c LINE L2 3101 3161 -226 7 1289 195 409 22 33 chrX 92367832 92367923 -74282373 - MIR SINE MIR -95 113 24 7 1289 610 320 34 17 chrX 92368336 92368574 -74281722 - MIR SINE MIR 0 262 21 7 1289 698 254 28 22 chrX 92370180 92370361 -74279935 - B3A SINE B2 -15 183 2 7 1289 424 297 204 25 chrX 92370878 92371158 -74279138 + L2a LINE L2 3061 3390 -36 7 1289 23 54 0 0 chrX 92372080 92372117 -74278179 + AT_rich Low_complexity Low_complexity 1 37 0 7 1289 851 316 31 12 chrX 92372813 92373072 -74277224 + B4A SINE B4 3 266 -26 7 1289 260 204 94 41 chrX 92373374 92373472 -74276824 + MIRc SINE MIR 57 167 -101 7 1289 2196 37 15 4 chrX 92373886 92374160 -74276136 + L1_Mus1 LINE L1 6291 6567 0 7 1289 205 226 45 75 chrX 92374215 92374282 -74276014 - MIRc SINE MIR -32 236 172 7 1289 580 287 121 89 chrX 92374505 92374853 -74275443 + ORR1E LTR MaLR 1 359 0 7 1289 557 280 38 6 chrX 92374954 92375112 -74275184 + RSINE1 SINE B4 3 165 0 7 1289 22 56 0 0 chrX 92375332 92375368 -74274928 + AT_rich Low_complexity Low_complexity 1 36 0 7 1289 374 198 91 23 chrX 92375369 92375457 -74274839 + L2a LINE L2 3333 3426 0 7 1289 369 62 0 0 chrX 92375808 92375856 -74274440 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 1289 226 210 113 0 chrX 92376132 92376194 -74274102 + MLT2B4 LTR ERVL 416 484 -72 7 1289 2010 105 17 92 chrX 92376208 92376555 -74273741 - Lx4A LINE L1 0 7058 6738 7 1289 300 269 12 25 chrX 92376651 92376731 -74273565 - MIR SINE MIR -134 128 50 7 1289 187 357 26 18 chrX 92376833 92376947 -74273349 + L2b LINE L2 2716 2830 -589 7 1289 198 360 103 19 chrX 92377185 92377341 -74272955 + L2b LINE L2 2898 3066 -353 7 1289 645 282 45 11 chrX 92377964 92378193 -74272103 + MLT2B4 LTR ERVL 1 233 -231 7 1289 688 236 36 0 chrX 92378507 92378647 -74271649 + B3A SINE B2 3 147 -51 7 1289 339 65 0 0 chrX 92378647 92378693 -74271603 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1289 485 224 126 66 chrX 92378693 92378719 -74271577 + B2_Mm2 SINE B2 135 178 -17 7 1289 271 232 38 66 chrX 92378721 92378827 -74271469 + L1_Rod LINE L1 27 129 -7043 7 1289 2006 219 21 2 chrX 92378812 92379243 -74271053 + Lx9 LINE L1 6970 7408 -236 7 1289 3942 20 0 0 chrX 92379247 92379789 -74270507 - L1Md_T LINE L1 -628 5954 5413 7 1289 4892 68 11 0 chrX 92379789 92380420 -74269876 + L1Md_T LINE L1 5945 6582 0 7 1289 637 146 187 11 chrX 92380431 92380482 -74269814 + Lx9 LINE L1 7416 7476 -168 7 1289 225 0 0 0 chrX 92380482 92380507 -74269789 + (TG)n Simple_repeat Simple_repeat 1 25 0 7 1289 637 146 187 11 chrX 92380507 92380642 -74269654 + Lx9 LINE L1 7477 7635 -9 7 1289 317 247 92 55 chrX 92380968 92381131 -74269165 + Lx8 LINE L1 7303 7471 -2 7 1289 317 284 197 11 chrX 92381153 92381331 -74268965 + L1MC4a LINE L1 5695 5905 -1977 7 1289 564 279 15 0 chrX 92381504 92381640 -74268656 - B1F SINE Alu -11 138 1 7 1289 404 18 55 0 chrX 92381642 92381697 -74268599 + (TTTTC)n Simple_repeat Simple_repeat 1 58 0 7 1289 306 0 0 0 chrX 92381697 92381731 -74268565 + (TCCCC)n Simple_repeat Simple_repeat 1 34 0 7 1289 195 42 0 0 chrX 92381731 92381754 -74268542 + (TCCC)n Simple_repeat Simple_repeat 4 27 0 7 1289 510 17 0 0 chrX 92381754 92381812 -74268484 + (TTTC)n Simple_repeat Simple_repeat 1 59 0 7 1289 481 357 41 16 chrX 92382119 92382361 -74267935 - MIR SINE MIR -10 252 5 7 1289 276 351 9 26 chrX 92382672 92382786 -74267510 + L2a LINE L2 3301 3412 -14 7 1289 595 272 80 68 chrX 92383270 92383534 -74266762 - MER58B DNA MER1_type -15 326 60 7 1289 801 212 31 17 chrX 92384895 92385066 -74265230 - MTE2a LTR MaLR -219 200 1 7 1289 266 239 0 15 chrX 92385421 92385489 -74264807 + MER52-int LTR ERV1 3849 3915 -3176 7 1289 226 132 57 0 chrX 92387357 92387410 -74262886 + T-rich Low_complexity Low_complexity 5 60 0 7 1289 357 217 0 0 chrX 92387762 92387845 -74262451 + A-rich Low_complexity Low_complexity 1 83 0 7 1289 213 39 0 0 chrX 92389611 92389637 -74260659 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7 1289 497 309 37 47 chrX 92389648 92389838 -74260458 + Lx7 LINE L1 7096 7283 -413 7 1289 27 0 0 0 chrX 92389983 92390010 -74260286 + GC_rich Low_complexity Low_complexity 1 27 0 7 1289 201 309 160 7 chrX 92390360 92390510 -74259786 + MIR3 SINE MIR 30 202 -6 7 1289 253 253 136 11 chrX 92392377 92392465 -74257831 - MIRc SINE MIR -47 221 123 7 1289 705 53 0 0 chrX 92392552 92392646 -74257650 + (TC)n Simple_repeat Simple_repeat 2 95 0 7 1289 237 294 179 27 chrX 92393237 92393349 -74256947 + L3 LINE CR1 4343 4471 -18 7 1289 972 293 77 45 chrX 92393603 92393978 -74256318 + MLT1B LTR MaLR 1 387 -3 7 1289 25 31 0 0 chrX 92394153 92394185 -74256111 + AT_rich Low_complexity Low_complexity 1 32 0 7 1289 441 262 151 34 chrX 92394203 92394349 -74255947 - RSINE1 SINE B4 0 165 3 7 1289 583 361 42 84 chrX 92394579 92394984 -74255312 - LTR33A LTR ERVL -10 510 123 7 1289 220 186 17 17 chrX 92395018 92395078 -74255218 + GA-rich Low_complexity Low_complexity 1 60 0 7 1289 447 35 0 0 chrX 92395610 92395667 -74254629 + (TCC)n Simple_repeat Simple_repeat 2 58 0 7 1289 306 0 0 0 chrX 92395667 92395701 -74254595 + (TC)n Simple_repeat Simple_repeat 1 34 0 7 1289 235 344 36 44 chrX 92396024 92396161 -74254135 - MIR3 SINE MIR -12 196 61 7 1289 2237 134 16 0 chrX 92396212 92396533 -74253763 - ORR1A3 LTR MaLR 0 326 1 7 1289 360 314 205 20 chrX 92396694 92396963 -74253333 + RMER20B LTR ERVK 177 517 -110 7 1289 490 304 37 7 chrX 92397340 92397476 -74252820 + B1F2 SINE Alu 10 149 0 7 1289 1890 303 53 46 chrX 92398587 92399872 -74250424 + L1_Mur3 LINE L1 1255 2548 -3332 7 1289 1651 323 44 9 chrX 92399868 92400797 -74249499 + Lx8 LINE L1 6352 7329 -144 7 1289 245 98 24 0 chrX 92401054 92401095 -74249201 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 1289 1171 72 0 0 chrX 92401095 92401248 -74249048 - B2_Mm2 SINE B2 -42 153 1 7 1289 3575 67 7 0 chrX 92401248 92401696 -74248600 + L1_Mus1 LINE L1 5660 6110 -457 7 1289 1267 166 80 36 chrX 92401696 92401971 -74248325 + RMER15 LTR ERVL 289 575 0 7 1289 235 337 12 0 chrX 92402181 92402267 -74248029 + L1MC4 LINE L1 7584 7670 -372 7 1289 707 313 101 14 chrX 92402271 92402559 -74247737 + MLT1A0 LTR MaLR 6 318 -47 7 1289 184 258 15 46 chrX 92402808 92402873 -74247423 - L2c LINE L2 -286 3101 3039 8 1289 554 312 0 13 chrX 92403007 92403163 -74247133 + RSINE1 SINE B4 2 155 -10 8 1289 27 0 0 0 chrX 92403683 92403710 -74246586 + AT_rich Low_complexity Low_complexity 1 27 0 8 1289 3738 18 2 0 chrX 92403715 92404110 -74246186 + MTA_Mm LTR MaLR 1 396 0 8 1289 1181 139 12 0 chrX 92404147 92404319 -74245977 + B2_Mm1t SINE B2 2 175 -18 8 1289 313 113 36 36 chrX 92404374 92404429 -74245867 + B2_Mm2 SINE B2 47 101 -94 8 1289 252 102 0 0 chrX 92404428 92404477 -74245819 + B2_Mm1t SINE B2 138 186 -7 8 1289 824 156 364 29 chrX 92404561 92404770 -74245526 - RLTR18 LTR ERVK -335 281 3 8 1289 1616 142 58 82 chrX 92404776 92405106 -74245190 + RLTR18 LTR ERVK 157 478 -138 8 161 840 244 44 39 chrX 92405718 92405923 -74244373 + ID_B1 SINE B4 5 210 -14 8 1290 862 153 12 0 chrX 92405923 92406086 -74244210 + GA-rich Low_complexity Low_complexity 2 166 0 8 1290 480 246 104 14 chrX 92407185 92407329 -74242967 + RLTR18 LTR ERVK 451 607 -9 8 1290 1446 191 111 69 chrX 92407361 92407722 -74242574 + ORR1C2 LTR MaLR 1 376 -8 8 1290 1237 284 54 21 chrX 92407726 92408207 -74242089 - L1_Mur3 LINE L1 -3635 2245 1749 8 1290 7949 128 12 48 chrX 92408199 92409861 -74240435 - L1VL4 LINE L1 -1413 2146 601 8 1290 1187 85 0 0 chrX 92409861 92410002 -74240294 - B1_Mm SINE Alu -6 141 1 8 1290 2381 149 17 179 chrX 92410002 92410202 -74240094 - L1VL4 LINE L1 -5702 600 400 8 1290 3406 67 2 5 chrX 92410449 92410868 -74239428 - L1Md_F2 LINE L1 -12 6570 6153 8 1290 7119 130 28 26 chrX 92410869 92412321 -74237975 - L1Md_F2 LINE L1 -4 6578 5688 8 1290 1846 188 202 80 chrX 92412328 92412786 -74237510 - RMER6C LTR ERVK 0 720 325 8 1290 606 91 0 0 chrX 92412786 92412885 -74237411 + (ATCTG)n Simple_repeat Simple_repeat 5 103 0 8 1290 1846 156 298 29 chrX 92412885 92413167 -74237129 - RMER6C LTR ERVK -343 347 1 8 1290 296 298 50 56 chrX 92413169 92413489 -74236807 - L1Md_F2 LINE L1 -6511 1217 900 8 1290 187 368 11 69 chrX 92414220 92414395 -74235901 - L2 LINE L2 -2223 1196 1032 8 1290 1225 76 0 0 chrX 92414450 92414587 -74235709 + B1_Mus2 SINE Alu 2 138 -9 8 1290 351 0 0 0 chrX 92414587 92414626 -74235670 + (CAAAC)n Simple_repeat Simple_repeat 1 39 0 8 1290 242 240 0 0 chrX 92414705 92414755 -74235541 - MT2B LTR ERVL 0 584 535 8 1290 561 101 0 0 chrX 92414755 92414854 -74235442 + (TC)n Simple_repeat Simple_repeat 1 99 0 8 1290 282 56 0 0 chrX 92414854 92414890 -74235406 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 1290 942 275 43 70 chrX 92414890 92415353 -74234943 - MT2B LTR ERVL -61 540 1 8 1290 1710 342 120 35 chrX 92415727 92416777 -74233519 + RMER15-int LTR ERVL 2042 3179 -1820 8 1290 1144 301 52 19 chrX 92417002 92417428 -74232868 + RMER15-int LTR ERVL 4164 4603 -396 8 1290 392 307 56 118 chrX 92417430 92417718 -74232578 + Lx8 LINE L1 6861 7130 -343 8 1290 437 276 115 6 chrX 92417857 92418014 -74232282 - RMER30 DNA MER1_type -28 174 1 8 1290 2818 242 85 29 chrX 92418019 92418811 -74231485 + Lx8 LINE L1 6638 7473 0 8 1290 699 285 110 55 chrX 92418940 92419341 -74230955 - RLTR23 LTR ERV1 0 430 8 8 1290 542 268 98 0 chrX 92419363 92419527 -74230769 + RMER15 LTR ERVL 379 558 -17 8 1290 2083 148 51 3 chrX 92419556 92419889 -74230407 - ORR1B1 LTR MaLR 0 394 46 8 1290 272 203 27 0 chrX 92420112 92420186 -74230110 + GA-rich Low_complexity Low_complexity 1 76 0 8 1290 348 206 0 76 chrX 92420321 92420400 -74229896 - ORR1B1 LTR MaLR -321 73 1 8 1290 25 0 0 0 chrX 92420551 92420576 -74229720 + AT_rich Low_complexity Low_complexity 1 25 0 8 1290 286 184 48 84 chrX 92421250 92421333 -74228963 - L2a LINE L2 -7 3419 3340 8 1290 8359 46 4 0 chrX 92421348 92422542 -74227754 - L1Md_F2 LINE L1 0 6582 5385 8 1290 242 371 34 29 chrX 92422696 92422904 -74227392 - L2b LINE L2 -236 3139 2931 8 1290 5101 113 68 6 chrX 92423194 92423888 -74226408 - RMER19A LTR ERVK 0 737 1 8 1290 402 309 103 0 chrX 92423891 92424027 -74226269 + MER5A1 DNA MER1_type 13 162 -4 8 1290 5079 46 2 0 chrX 92425406 92425989 -74224307 - L1Md_T LINE L1 0 6582 5999 8 1290 243 164 36 0 chrX 92426066 92426121 -74224175 + A-rich Low_complexity Low_complexity 2 58 0 8 1290 531 0 0 0 chrX 92426880 92426939 -74223357 + (GA)n Simple_repeat Simple_repeat 2 60 0 8 1290 689 138 172 0 chrX 92427047 92427163 -74223133 + B1_Mus1 SINE Alu 1 136 -12 8 1290 183 80 0 0 chrX 92427164 92427189 -74223107 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 8 1290 1755 231 122 6 chrX 92427192 92427694 -74222602 - L1_Mur3 LINE L1 -710 5170 4611 8 1290 610 315 57 127 chrX 92427789 92428328 -74221968 + RMER20B LTR ERVK 30 580 -47 8 1290 545 313 91 48 chrX 92428568 92428921 -74221375 + Lx8 LINE L1 7103 7470 -3 8 1290 6331 118 16 6 chrX 92429167 92430060 -74220236 + Lx2 LINE L1 6096 6997 0 8 1290 760 262 25 30 chrX 92430615 92430812 -74219484 - ID_B1 SINE B4 -4 220 25 8 1290 1236 200 4 7 chrX 92430873 92431145 -74219151 + L1Md_A LINE L1 621 891 -5833 8 1290 6459 55 1 4 chrX 92431146 92431953 -74218343 + L1Md_F2 LINE L1 4782 5586 -297 8 1290 8021 61 25 0 chrX 92431953 92432925 -74217371 + L1Md_F2 LINE L1 5587 6582 0 8 1290 651 238 45 56 chrX 92432976 92433154 -74217142 - B2_Mm2 SINE B2 -19 176 1 8 1290 293 329 6 30 chrX 92433588 92433757 -74216539 + A-rich Low_complexity Low_complexity 2 166 0 8 1290 1503 192 73 73 chrX 92433956 92434354 -74215942 - RMER10B LTR ERVL 0 398 1 8 1290 1014 215 9 133 chrX 92434411 92434547 -74215749 + RMER17C LTR ERVK 3 129 -281 8 1290 951 117 0 0 chrX 92434547 92434727 -74215569 + (TC)n Simple_repeat Simple_repeat 1 180 0 8 1290 1014 215 9 133 chrX 92434727 92435019 -74215277 + RMER17C LTR ERVK 130 378 -32 8 1290 431 100 14 0 chrX 92435073 92435143 -74215153 + (TG)n Simple_repeat Simple_repeat 2 72 0 8 1290 689 292 118 31 chrX 92435146 92435401 -74214895 - B4A SINE B4 -12 280 4 8 1290 1310 233 150 6 chrX 92435492 92435846 -74214450 + MTD LTR MaLR 1 405 -14 8 1290 1001 220 47 34 chrX 92435945 92436186 -74214110 - RLTR18B LTR ERVK -110 402 163 8 1290 851 110 0 0 chrX 92436186 92436313 -74213983 + Lx LINE L1 6521 6647 -7 8 1290 391 214 102 75 chrX 92436313 92436505 -74213791 - RLTR18B LTR ERVK -285 331 3 8 1290 2117 191 78 96 chrX 92436884 92437424 -74212872 + Lx5 LINE L1 6518 7047 -3 8 1290 2114 198 97 31 chrX 92437751 92438213 -74212083 + RMER5 LTR ERV1 14 511 -23 8 1290 3511 184 7 2 chrX 92438213 92438785 -74211511 - RMER15 LTR ERVL 0 575 1 8 1290 2114 198 97 31 chrX 92438785 92438806 -74211490 + RMER5 LTR ERV1 512 529 -5 8 1290 539 278 57 31 chrX 92438816 92439009 -74211287 + MT2A LTR ERVL 35 232 -301 8 1290 2307 100 14 70 chrX 92439180 92439525 -74210771 - ORR1A3 LTR MaLR 0 326 1 8 1290 1664 202 186 18 chrX 92439766 92440167 -74210129 + MT2A LTR ERVL 1 551 -50 8 1290 246 95 0 0 chrX 92440167 92440209 -74210087 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 1290 857 249 69 57 chrX 92440209 92440247 -74210049 + MT2A LTR ERVL 552 600 -1 8 1290 728 138 16 8 chrX 92441258 92441382 -74208914 - RLTR19-int LTR ERVK -3683 2454 2330 8 1290 604 226 42 24 chrX 92441408 92441576 -74208720 - RLTR19-int LTR ERVK -3457 2065 1895 8 1290 251 157 75 38 chrX 92441649 92441702 -74208594 - RMER17C-int LTR ERVK -4070 2067 2013 8 1290 376 291 18 127 chrX 92441791 92442019 -74208277 - RMER17C-int LTR ERVK -1904 1334 1132 8 1290 203 175 0 0 chrX 92442169 92442209 -74208087 + A-rich Low_complexity Low_complexity 1 40 0 8 1290 251 172 29 106 chrX 92442353 92442457 -74207839 - MYSERV-int LTR ERVK -1069 5481 5386 8 1290 1074 193 319 64 chrX 92443141 92443515 -74206781 - RodERV21-int LTR ERV1 -3992 999 530 8 1290 939 102 0 0 chrX 92443515 92443652 -74206644 + (GA)n Simple_repeat Simple_repeat 2 138 0 8 1290 216 67 0 0 chrX 92444003 92444033 -74206263 + (T)n Simple_repeat Simple_repeat 1 30 0 8 1290 2785 269 52 7 chrX 92444082 92444933 -74205363 + MERVL_2A-int LTR ERVL 1644 2532 -3229 8 1290 657 157 0 0 chrX 92445121 92445236 -74205060 + T-rich Low_complexity Low_complexity 5 119 0 8 1290 250 218 63 13 chrX 92445596 92445675 -74204621 + MIR SINE MIR 106 188 -74 8 1290 342 0 0 0 chrX 92445687 92445725 -74204571 + (TA)n Simple_repeat Simple_repeat 2 39 0 8 1290 243 0 0 0 chrX 92445725 92445751 -74204545 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 1290 966 287 35 18 chrX 92445809 92446093 -74204203 + B4A SINE B4 2 290 -2 8 1290 201 208 0 36 chrX 92446093 92446148 -74204148 + (CAGAGA)n Simple_repeat Simple_repeat 3 55 0 8 1290 710 304 116 46 chrX 92446206 92446578 -74203718 - L2 LINE L2 -359 3060 2663 8 1290 1616 227 74 18 chrX 92446579 92446969 -74203327 - MTD LTR MaLR -7 412 1 8 1290 911 319 121 30 chrX 92446971 92447194 -74203102 - L2 LINE L2 -749 2670 2438 8 1290 1483 227 88 10 chrX 92447194 92447581 -74202715 + MTD LTR MaLR 1 417 -2 8 1290 911 319 121 30 chrX 92447581 92447917 -74202379 - L2 LINE L2 -982 2437 2060 8 1290 568 287 0 22 chrX 92448032 92448171 -74202125 - B1F2 SINE Alu 0 149 14 8 1290 785 199 0 34 chrX 92449305 92449451 -74200845 - B1_Mur1 SINE Alu -8 141 1 8 1290 21 36 0 0 chrX 92449484 92449512 -74200784 + AT_rich Low_complexity Low_complexity 1 28 0 8 1290 220 315 182 18 chrX 92449587 92449697 -74200599 - MIRc SINE MIR -130 138 11 8 1290 513 308 49 16 chrX 92450103 92450288 -74200008 + B3A SINE B2 2 192 -6 8 1290 351 0 0 0 chrX 92450359 92450398 -74199898 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 1290 526 289 94 19 chrX 92450408 92450567 -74199729 + MTE-int LTR MaLR 9 179 -1401 8 1290 261 282 173 75 chrX 92451348 92451574 -74198722 - RMER21B LTR ERV1 -275 567 320 8 1290 1189 224 120 26 chrX 92451633 92452059 -74198237 - RMER4A LTR ERVK 0 466 1 8 1290 338 339 123 0 chrX 92452135 92452330 -74197966 + L2 LINE L2 2535 2753 -666 8 1290 534 221 30 0 chrX 92452564 92452671 -74197625 - B1_Mur2 SINE Alu -2 118 1 8 1290 180 0 0 0 chrX 92452737 92452757 -74197539 + (TATG)n Simple_repeat Simple_repeat 1 20 0 8 1290 228 312 62 31 chrX 92453008 92453104 -74197192 + MIRb SINE MIR 163 261 -7 8 1290 563 319 14 14 chrX 92453213 92453359 -74196937 - RSINE1 SINE B4 -2 163 18 8 1290 238 310 4 168 chrX 92453361 92453605 -74196691 + MIR SINE MIR 57 267 -1 8 1290 4441 141 90 71 chrX 92454207 92455092 -74195204 - RMER19B LTR ERVK 0 902 1 8 1290 2216 171 57 69 chrX 92455168 92455589 -74194707 - RLTR31A_Mm LTR ERVK 0 561 89 9 1290 477 0 0 0 chrX 92455589 92455642 -74194654 + (TC)n Simple_repeat Simple_repeat 2 54 0 9 1290 2216 158 49 71 chrX 92455642 92455730 -74194566 - RLTR31A_Mm LTR ERVK -496 88 1 9 1290 360 111 0 0 chrX 92455902 92455956 -74194340 + (TA)n Simple_repeat Simple_repeat 2 55 0 9 1290 378 0 0 0 chrX 92456664 92456706 -74193590 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 9 1290 539 256 36 50 chrX 92456719 92456859 -74193437 - B1_Mur1 SINE Alu -6 143 6 9 1290 8819 93 33 18 chrX 92456891 92458433 -74191863 + Lx3B LINE L1 5416 6972 -1 9 1290 198 191 0 0 chrX 92458448 92458490 -74191806 + GA-rich Low_complexity Low_complexity 2 43 0 9 1290 444 259 9 9 chrX 92459568 92459677 -74190619 + PB1D10 SINE Alu 1 109 -8 9 1290 712 277 35 20 chrX 92459703 92459902 -74190394 + B4 SINE B4 1 202 -90 9 1290 867 92 0 0 chrX 92459943 92460074 -74190222 + (CA)n Simple_repeat Simple_repeat 2 132 0 9 1290 333 0 0 0 chrX 92460074 92460110 -74190186 + (GA)n Simple_repeat Simple_repeat 2 38 0 9 1290 1404 76 0 16 chrX 92460288 92460475 -74189821 + B2_Mm2 SINE B2 3 186 -9 9 1290 1391 128 5 14 chrX 92460712 92460926 -74189370 + RMER4A LTR ERVK 7 218 -248 9 1290 49 0 0 0 chrX 92460926 92460975 -74189321 + AT_rich Low_complexity Low_complexity 1 49 0 9 1290 710 216 5 71 chrX 92460975 92461159 -74189137 + RMER4A LTR ERVK 222 393 -73 9 1290 10877 26 0 0 chrX 92461161 92463139 -74187157 - L1Md_T LINE L1 -33 6549 4571 9 1290 36998 36 0 2 chrX 92463135 92469249 -74181047 - L1Md_T LINE L1 -2 6583 386 9 1290 715 87 0 55 chrX 92469249 92469358 -74180938 + RMER4A LTR ERVK 364 466 0 9 1290 189 0 0 0 chrX 92469410 92469431 -74180865 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 9 1290 1118 68 0 20 chrX 92469434 92469584 -74180712 - B1_Mm SINE Alu 0 147 1 9 1290 180 186 0 0 chrX 92469809 92469868 -74180428 + (TA)n Simple_repeat Simple_repeat 2 60 0 9 1290 233 53 0 50 chrX 92470226 92470266 -74180030 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 9 1290 423 0 0 0 chrX 92470523 92470570 -74179726 + (TA)n Simple_repeat Simple_repeat 2 48 0 9 1290 1041 196 22 0 chrX 92470920 92471149 -74179147 + L1Md_A LINE L1 101 334 -6282 9 1290 34509 37 5 0 chrX 92471141 92476035 -74174261 + L1Md_A LINE L1 670 5586 -297 9 1290 8428 34 0 0 chrX 92476035 92477030 -74173266 + L1Md_A LINE L1 5587 6581 -1 9 1290 282 73 0 0 chrX 92477223 92477264 -74173032 + (TC)n Simple_repeat Simple_repeat 2 42 0 9 1290 1600 164 123 20 chrX 92477980 92478553 -74171743 + RMER6A LTR ERVK 1 690 0 9 1290 2723 197 56 6 chrX 92478553 92479077 -74171219 - RMER4B LTR ERVK -18 567 17 9 1290 1474 170 155 4 chrX 92479081 92479487 -74170809 + RMER4B LTR ERVK 88 585 0 9 1290 21 0 0 0 chrX 92479988 92480009 -74170287 + AT_rich Low_complexity Low_complexity 1 21 0 9 1290 39438 6 0 0 chrX 92480675 92487075 -74163221 - L1Md_A LINE L1 0 6582 214 9 1290 2419 87 26 3 chrX 92487758 92488106 -74162190 + L1_Mus3 LINE L1 6277 6632 -6 9 1290 282 169 61 33 chrX 92488924 92489000 -74161296 + B1_Mur1 SINE Alu 34 143 -6 9 1290 9231 101 18 14 chrX 92489659 92491075 -74159221 - Lx4A LINE L1 -3 7055 5634 9 1290 297 0 0 0 chrX 92493113 92493146 -74157150 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1290 796 228 74 0 chrX 92493151 92493300 -74156996 - B3A SINE B2 -38 160 1 9 1290 625 231 0 0 chrX 92493350 92493458 -74156838 - ID_B1 SINE B4 -9 215 108 9 1290 274 299 29 66 chrX 92493458 92493482 -74156814 + YREP_Mm Unknown Unknown 186 312 -1500 9 1290 660 274 67 38 chrX 92493726 92493935 -74156361 - ORR1E LTR MaLR -17 342 128 9 1290 254 188 64 115 chrX 92493980 92494058 -74156238 - ORR1D2 LTR MaLR -131 239 166 9 1290 659 259 21 39 chrX 92494140 92494373 -74155923 - Lx6 LINE L1 -26 7434 7206 9 1290 576 0 0 0 chrX 92494652 92494716 -74155580 + (GAA)n Simple_repeat Simple_repeat 1 64 0 9 1290 1376 82 16 0 chrX 92496157 92496340 -74153956 - B2_Mm2 SINE B2 -9 186 1 9 1290 2689 169 100 28 chrX 92496343 92496984 -74153312 - RMER6C LTR ERVK -3 687 1 9 1290 28 0 0 0 chrX 92497017 92497045 -74153251 + AT_rich Low_complexity Low_complexity 1 28 0 9 1290 797 299 41 24 chrX 92497140 92497435 -74152861 + RMER5 LTR ERV1 49 348 -186 9 1290 8823 111 7 14 chrX 92497435 92498987 -74151309 + Lx3A LINE L1 5442 6979 -2 9 1290 667 208 58 18 chrX 92499021 92499192 -74151104 + RMER5 LTR ERV1 353 530 -4 9 1290 222 308 0 0 chrX 92499326 92499378 -74150918 + ID SINE ID 22 73 -151 9 1290 3546 81 30 11 chrX 92499476 92500000 -74150296 - Lx LINE L1 -7 6647 6114 9 1290 1103 56 68 0 chrX 92500004 92500165 -74150131 - Lx LINE L1 -547 6107 5936 1 1290 191 311 112 56 chrX 92501760 92501920 -74148376 - MIRb SINE MIR -91 185 17 2 1290 25 31 0 0 chrX 92502394 92502426 -74147870 + AT_rich Low_complexity Low_complexity 1 32 0 3 1290 623 290 105 0 chrX 92502438 92502600 -74147696 - B3A SINE B2 -18 180 2 4 1290 475 315 77 106 chrX 92502905 92503452 -74146844 + MT2A LTR ERVL 1 531 -2 5 1290 2140 264 70 26 chrX 92504040 92504142 -74146154 - Lx8 LINE L1 -114 7359 7262 6 1290 2354 81 12 58 chrX 92504142 92504485 -74145811 + ORR1A2 LTR MaLR 1 327 0 7 1290 2140 264 70 26 chrX 92504485 92505078 -74145218 - Lx8 LINE L1 -212 7261 6633 6 1290 510 244 176 48 chrX 92505098 92505348 -74144948 - Lx8 LINE L1 0 7473 7192 8 1290 4965 142 22 80 chrX 92505356 92506307 -74143989 - RMER19B LTR ERVK -6 896 1 9 1290 1145 327 18 18 chrX 92506307 92506804 -74143492 - Lx8 LINE L1 -291 7182 6668 8 1290 245 146 0 20 chrX 92506968 92507017 -74143279 + (CAA)n Simple_repeat Simple_repeat 2 49 0 1 1290 821 286 121 0 chrX 92507017 92507290 -74143006 - Lx8 LINE L1 -833 6640 6335 8 1290 357 229 35 28 chrX 92507328 92507472 -74142824 + (TA)n Simple_repeat Simple_repeat 1 145 0 1 1290 198 143 0 0 chrX 92507485 92507520 -74142776 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1290 1160 75 7 0 chrX 92507523 92507670 -74142626 - B1_Mus1 SINE Alu 0 148 1 1 1290 21 0 0 0 chrX 92507744 92507765 -74142531 + AT_rich Low_complexity Low_complexity 1 21 0 1 1290 23 54 0 0 chrX 92508125 92508162 -74142134 + AT_rich Low_complexity Low_complexity 1 37 0 1 1290 7138 48 3 6 chrX 92508546 92509477 -74140819 - L1Md_F2 LINE L1 -1 6581 5654 1 1290 21 0 0 0 chrX 92510196 92510217 -74140079 + AT_rich Low_complexity Low_complexity 1 21 0 1 1290 264 277 24 68 chrX 92510447 92510652 -74139644 - RMER17A LTR ERVK -276 475 280 1 1290 225 0 0 0 chrX 92511575 92511600 -74138696 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 1290 450 0 0 0 chrX 92511600 92511649 -74138647 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 1290 303 326 44 62 chrX 92512184 92512376 -74137920 - MIR SINE MIR -60 208 16 2 1290 22 0 0 0 chrX 92512981 92513003 -74137293 + AT_rich Low_complexity Low_complexity 1 22 0 2 1290 628 267 42 4 chrX 92513004 92513241 -74137055 - L1MB4 LINE L1 -76 6104 5859 2 1290 5233 241 112 23 chrX 92513324 92513849 -74136447 - Lx6 LINE L1 -16 7444 6925 2 1290 252 0 0 0 chrX 92513849 92513877 -74136419 + (TC)n Simple_repeat Simple_repeat 1 28 0 2 1290 5233 241 112 23 chrX 92513877 92514000 -74136296 - Lx6 LINE L1 -536 6924 6759 2 1290 288 77 0 0 chrX 92514000 92514039 -74136257 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 1290 5233 241 112 23 chrX 92514039 92514878 -74135418 - Lx6 LINE L1 -702 6758 5824 2 1290 198 91 0 0 chrX 92514878 92514911 -74135385 + (TTTC)n Simple_repeat Simple_repeat 1 33 0 2 1290 1257 101 21 16 chrX 92514911 92515103 -74135193 - B2_Mm2 SINE B2 -1 194 2 2 1290 194 336 132 7 chrX 92515727 92515871 -74134425 - MIRc SINE MIR -67 201 40 2 1290 4347 39 2 0 chrX 92517243 92517760 -74132536 - L1Md_T LINE L1 -3 6579 6062 3 1290 10290 18 0 0 chrX 92517760 92519150 -74131146 + L1Md_T LINE L1 4649 6038 -544 3 1290 2810 184 119 8 chrX 92519170 92519782 -74130514 - RMER1B Other Other -10 1056 377 3 1290 2920 193 43 3 chrX 92519797 92520451 -74129845 - Lx6 LINE L1 -108 5772 5093 2 1290 334 296 17 9 chrX 92520668 92520784 -74129512 - MIR SINE MIR -42 220 104 3 1290 5178 126 27 9 chrX 92520975 92521779 -74128517 - Lx2B LINE L1 -11 6989 6171 3 1290 1694 170 75 46 chrX 92521838 92522184 -74128112 + ORR1B2 LTR MaLR 3 358 -9 3 1290 288 340 34 34 chrX 92522261 92522410 -74127886 - MIR SINE MIR -113 149 1 3 1290 1247 274 118 0 chrX 92522456 92522788 -74127508 + MTEa LTR MaLR 1 371 -8 3 1290 1446 211 28 94 chrX 92523466 92523789 -74126507 - Lx7 LINE L1 -6 7690 7395 3 1290 510 17 0 0 chrX 92523789 92523848 -74126448 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 1290 207 0 0 0 chrX 92523848 92523870 -74126426 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1290 1446 211 28 94 chrX 92523870 92523921 -74126375 - Lx7 LINE L1 -302 7394 7356 3 1290 651 26 0 0 chrX 92523921 92523998 -74126298 + (TA)n Simple_repeat Simple_repeat 2 78 0 4 1290 1446 211 28 94 chrX 92523998 92524150 -74126146 - Lx7 LINE L1 -341 7355 7199 3 1290 26 0 0 0 chrX 92524691 92524717 -74125579 + AT_rich Low_complexity Low_complexity 1 26 0 4 1290 303 113 0 0 chrX 92525827 92525880 -74124416 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1290 396 319 102 28 chrX 92526109 92526626 -74123670 + Lx8 LINE L1 5817 6348 -1125 4 1290 1149 97 0 0 chrX 92526626 92526791 -74123505 + (TTCTC)n Simple_repeat Simple_repeat 1 165 0 4 1290 8294 136 31 6 chrX 92526792 92528609 -74121687 - Lx2A1 LINE L1 -7 7001 5132 4 1290 22 0 0 0 chrX 92528609 92528631 -74121665 + AT_rich Low_complexity Low_complexity 1 22 0 4 1290 22 80 0 0 chrX 92528806 92528856 -74121440 + AT_rich Low_complexity Low_complexity 1 50 0 4 1290 36006 43 6 3 chrX 92528864 92534938 -74115358 + L1Md_T LINE L1 160 6346 -239 4 1290 469 82 0 0 chrX 92534946 92535019 -74115277 + L1Md_T LINE L1 6511 6583 -2 4 1290 1733 106 0 14 chrX 92535019 92535297 -74114999 - L1Md_F2 LINE L1 -37 6545 6272 4 1290 2718 160 2 41 chrX 92535296 92535837 -74114459 - Lx2A1 LINE L1 -755 5131 4612 4 161 5851 150 59 13 chrX 92535839 92536872 -74113424 + Lx4A LINE L1 5977 7057 -1 5 1291 1482 198 98 39 chrX 92536900 92537289 -74113007 - RMER13B LTR ERVK -225 683 272 5 1291 1547 211 41 39 chrX 92537288 92537727 -74112569 - RMER17B LTR ERVK -518 440 1 5 1291 320 329 30 54 chrX 92538087 92538237 -74112059 - MIRb SINE MIR -108 160 6 5 1291 411 346 96 23 chrX 92538375 92538594 -74111702 - MIRb SINE MIR -18 250 16 5 1291 276 319 78 78 chrX 92539364 92539544 -74110752 + MIR3 SINE MIR 10 189 -19 5 1291 21 0 0 0 chrX 92540368 92540389 -74109907 + AT_rich Low_complexity Low_complexity 1 21 0 5 1291 3378 123 43 4 chrX 92540389 92540895 -74109401 - Lx4A LINE L1 0 7058 6533 5 1291 760 234 25 45 chrX 92540895 92541096 -74109200 - ORR1D1 LTR MaLR -9 365 169 5 1291 206 216 0 0 chrX 92541097 92541134 -74109162 + polypurine Low_complexity Low_complexity 4 40 0 5 1291 953 228 0 11 chrX 92541135 92541317 -74108979 - ORR1D1 LTR MaLR -194 180 1 5 1291 914 194 98 2 chrX 92541318 92541419 -74108877 - ORR1D1-int LTR MaLR -62 1901 1821 5 1291 819 78 114 32 chrX 92541419 92541543 -74108753 - Lx LINE L1 -1 6653 6534 6 1291 180 0 0 0 chrX 92541543 92541563 -74108733 + (CCCA)n Simple_repeat Simple_repeat 4 23 0 6 1291 819 78 114 32 chrX 92541563 92541596 -74108700 - Lx LINE L1 -121 6533 6483 6 1291 4885 228 32 38 chrX 92541596 92542727 -74107569 - ORR1D1-int LTR MaLR -143 1820 1 5 1291 725 212 224 0 chrX 92542727 92542897 -74107399 - ORR1D1 LTR MaLR 0 374 167 5 1291 615 117 0 0 chrX 92542910 92543004 -74107292 + (GA)n Simple_repeat Simple_repeat 1 94 0 6 1291 806 195 28 39 chrX 92543004 92543185 -74107111 - ORR1D1 LTR MaLR -193 181 3 5 1291 409 238 30 0 chrX 92543319 92543420 -74106876 - Lx7 LINE L1 -2006 5690 5587 6 1291 824 0 10 0 chrX 92543431 92543527 -74106769 + (TTC)n Simple_repeat Simple_repeat 2 98 0 6 1291 411 328 37 81 chrX 92543528 92543664 -74106632 - B1_Mur1 SINE Alu -14 135 6 6 1291 524 258 140 23 chrX 92543666 92543880 -74106416 - L1_Rod LINE L1 -297 5550 5312 6 1291 22 35 0 0 chrX 92544361 92544390 -74105906 + AT_rich Low_complexity Low_complexity 1 29 0 6 1291 3032 152 21 9 chrX 92544654 92545213 -74105083 + Lx2 LINE L1 5981 6546 -451 6 1291 2224 142 64 51 chrX 92545213 92545680 -74104616 + IAPLTR2_Mm LTR ERVK 1 473 -2 6 1291 4191 58 65 43 chrX 92545680 92546326 -74103970 + IAPEz-int LTR ERVK 3 662 -5819 6 1291 424 38 0 0 chrX 92546326 92546379 -74103917 + IAPEz-int LTR ERVK 1359 1411 -5070 6 1291 1739 115 4 4 chrX 92546378 92546640 -74103656 + IAPEz-int LTR ERVK 2236 2497 -5183 6 1291 834 91 25 0 chrX 92546637 92546758 -74103538 + IAPEz-int LTR ERVK 4785 4908 -2772 6 1291 23453 18 22 19 chrX 92546754 92548278 -74102018 + IAPEz-int LTR ERVK 3519 5084 -1397 7 1291 181 308 0 110 chrX 92548278 92548351 -74101945 - L2 LINE L2 -3260 159 95 7 1291 23453 18 22 19 chrX 92548351 92549709 -74100587 + IAPEz-int LTR ERVK 5085 6481 0 7 1291 2212 144 64 51 chrX 92549709 92550176 -74100120 + IAPLTR2_Mm LTR ERVK 1 473 -2 7 1291 2092 157 101 0 chrX 92550181 92550595 -74099701 + Lx2 LINE L1 6541 6996 -1 7 1291 502 306 102 87 chrX 92551055 92551092 -74099204 + MTEa LTR MaLR 2 37 -342 7 1291 498 33 0 0 chrX 92551092 92551152 -74099144 + (TG)n Simple_repeat Simple_repeat 1 60 0 7 1291 502 306 102 87 chrX 92551152 92551458 -74098838 + MTEa LTR MaLR 38 350 -29 7 1291 330 26 0 0 chrX 92551466 92551505 -74098791 + (CAA)n Simple_repeat Simple_repeat 2 40 0 7 1291 195 360 143 9 chrX 92551867 92551979 -74098317 + MIR SINE MIR 22 148 -60 7 1291 2030 132 12 9 chrX 92552591 92552911 -74097385 + ORR1A4 LTR MaLR 1 321 -8 7 1291 471 208 52 0 chrX 92552919 92553015 -74097281 - RMER20B LTR ERVK -526 101 1 7 1291 334 301 103 0 chrX 92553509 92553655 -74096641 - MER46C DNA MER2_type -137 201 41 8 1291 302 375 29 14 chrX 92553657 92553803 -74096493 - MIR SINE MIR -103 165 18 8 1291 261 373 49 7 chrX 92554876 92555019 -74095277 - B1_Mur2 SINE Alu 0 149 1 8 1291 290 287 19 68 chrX 92555023 92555134 -74095162 + MIR SINE MIR 10 112 -164 8 1291 247 264 43 21 chrX 92555871 92555964 -74094332 + Lx8 LINE L1 6927 7021 -452 8 1291 242 360 33 0 chrX 92555994 92556147 -74094149 + Lx8 LINE L1 7188 7345 -128 8 1291 23 0 0 0 chrX 92556211 92556234 -74094062 + AT_rich Low_complexity Low_complexity 1 23 0 8 1291 311 281 44 11 chrX 92556253 92556433 -74093863 + L1MB4 LINE L1 5993 6178 -2 8 1291 1774 224 81 5 chrX 92556476 92556858 -74093438 - MTD LTR MaLR -8 411 1 8 1291 459 0 0 0 chrX 92556928 92556979 -74093317 + (TA)n Simple_repeat Simple_repeat 1 51 0 8 1291 6691 79 12 22 chrX 92557223 92558224 -74092072 + Lx3_Mus LINE L1 5692 6682 -327 8 1291 434 197 28 62 chrX 92558224 92558357 -74091939 - RMER17B LTR ERVK -787 121 3 9 1291 570 190 185 0 chrX 92558506 92558706 -74091590 + Lx9 LINE L1 7408 7644 0 9 1291 324 311 0 39 chrX 92559155 92559232 -74091064 - PB1D10 SINE Alu -37 80 7 9 1291 25 51 0 0 chrX 92559567 92559606 -74090690 + AT_rich Low_complexity Low_complexity 1 39 0 9 1291 249 264 123 0 chrX 92559609 92559715 -74090581 - L1_Mur3 LINE L1 -4075 1805 1687 9 1291 269 266 0 11 chrX 92559738 92559833 -74090463 - L1_Mur3 LINE L1 -6767 961 868 9 1291 496 298 87 18 chrX 92559863 92560253 -74090043 + L1M2 LINE L1 3620 4036 -2104 9 1291 2714 256 13 117 chrX 92560268 92560590 -74089706 + Lx5 LINE L1 6192 6444 -606 9 1291 2837 95 5 22 chrX 92560590 92561000 -74089296 - RLTR9D LTR ERVK 0 403 1 9 1291 2714 256 13 117 chrX 92561000 92561616 -74088680 + Lx5 LINE L1 6445 7032 -18 9 1291 726 304 85 13 chrX 92561644 92562212 -74088084 + L1M2 LINE L1 4061 4689 -1451 9 1291 6185 202 120 39 chrX 92562218 92564030 -74086266 + Lx6 LINE L1 109 2060 -3820 9 1291 387 41 0 0 chrX 92564030 92564079 -74086217 + (CCA)n Simple_repeat Simple_repeat 3 51 0 9 1291 6185 175 68 8 chrX 92564079 92564701 -74085595 + Lx6 LINE L1 2061 2742 -3138 9 1291 2090 176 28 17 chrX 92564717 92565227 -74085069 + Lx6 LINE L1 4473 5036 -850 9 1291 357 109 0 0 chrX 92566373 92566437 -74083859 + (CCAA)n Simple_repeat Simple_repeat 4 67 0 1 1291 3974 175 57 18 chrX 92566442 92567283 -74083013 + Lx6 LINE L1 5006 5879 -1581 9 1291 1816 160 82 18 chrX 92567283 92567626 -74082670 - ORR1B2 LTR MaLR -2 365 1 1 1291 4926 208 37 16 chrX 92567626 92568556 -74081740 + Lx6 LINE L1 5880 6887 -573 9 1291 2170 105 72 17 chrX 92568556 92568905 -74081391 + RLTR9A LTR ERVK 1 368 0 1 1291 4926 210 33 4 chrX 92568905 92569409 -74080887 + Lx6 LINE L1 6888 7403 -57 9 1291 464 319 88 10 chrX 92569624 92569833 -74080463 + MIR SINE MIR 34 251 -11 1 1291 518 211 16 0 chrX 92570872 92571000 -74079296 + (TATG)n Simple_repeat Simple_repeat 2 131 0 1 1291 233 91 0 0 chrX 92571018 92571051 -74079245 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1291 2027 159 45 3 chrX 92571512 92571871 -74078425 - ORR1D1 LTR MaLR 0 374 1 1 1291 859 319 56 58 chrX 92572194 92572554 -74077742 - ORR1E LTR MaLR 0 359 1 1 1291 958 233 42 63 chrX 92572570 92572854 -74077442 - ORR1E-int LTR MaLR -17 1353 1076 1 1291 4812 98 3 1 chrX 92572905 92573582 -74076714 - L1_Mus3 LINE L1 -5 6633 5956 1 1291 5289 65 0 4 chrX 92573613 92574290 -74076006 - L1_Mus1 LINE L1 0 6567 5894 1 1291 7738 88 7 0 chrX 92574291 92575434 -74074862 + L1_Mm LINE L1 2310 3460 -2423 1 1291 1140 90 0 12 chrX 92575432 92575601 -74074695 - L1_Mus3 LINE L1 -700 5938 5772 1 1291 186 43 0 0 chrX 92577079 92577102 -74073194 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1291 198 0 0 0 chrX 92577102 92577123 -74073173 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 1291 273 305 126 40 chrX 92577981 92578203 -74072093 - MER50-int LTR ERV1 -5240 1965 1725 1 1291 1791 223 52 5 chrX 92578213 92578596 -74071700 + MTD LTR MaLR 12 412 -7 1 1291 207 0 0 0 chrX 92578944 92578967 -74071329 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1291 246 316 7 0 chrX 92579333 92579443 -74070853 - L1M2 LINE L1 -891 5252 5097 1 1291 30 0 0 0 chrX 92579452 92579482 -74070814 + AT_rich Low_complexity Low_complexity 1 30 0 1 1291 1598 31 5 10 chrX 92579493 92579686 -74070610 + B2_Mm1t SINE B2 2 193 0 1 1291 225 132 0 117 chrX 92579708 92579768 -74070528 + T-rich Low_complexity Low_complexity 1 53 0 1 1291 232 28 0 0 chrX 92579775 92579811 -74070485 - L1_Mus2 LINE L1 -3 6563 6528 1 1291 245 76 0 0 chrX 92580019 92580072 -74070224 - Lx2 LINE L1 -2 6995 6952 1 1291 459 233 61 12 chrX 92580093 92580258 -74070038 - L1MA4 LINE L1 -387 5913 5741 1 1291 1328 71 0 5 chrX 92580353 92580566 -74069730 + (TTTC)n Simple_repeat Simple_repeat 1 211 0 1 1291 26588 101 33 15 chrX 92580746 92586784 -74063512 - L1_Mus2 LINE L1 0 6566 410 1 1291 891 307 21 19 chrX 92586812 92587117 -74063179 - L1_Mur3 LINE L1 -336 5544 5238 1 1291 189 0 0 0 chrX 92587117 92587138 -74063158 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1291 891 253 50 46 chrX 92587138 92587312 -74062984 - L1_Mur3 LINE L1 -866 5277 5096 1 1291 1459 126 36 7 chrX 92587348 92587677 -74062619 - L1_Mus4 LINE L1 -171 6465 6243 1 1291 505 312 87 34 chrX 92587704 92587725 -74062571 - L1_Mur3 LINE L1 -1134 5009 4993 1 1291 1773 251 9 14 chrX 92587725 92588146 -74062150 - MTD LTR MaLR 0 419 1 1 1291 505 312 87 34 chrX 92588146 92588505 -74061791 - L1_Mur3 LINE L1 -1151 4992 4609 1 1291 1174 190 190 31 chrX 92588509 92588867 -74061429 + MTD LTR MaLR 5 419 0 1 1291 315 278 16 80 chrX 92588944 92589069 -74061227 - L1_Mur3 LINE L1 -1700 4443 4327 1 1291 647 205 18 0 chrX 92589113 92589225 -74061071 + B3 SINE B2 80 193 -23 1 1291 869 276 29 33 chrX 92589309 92589822 -74060474 - L1M2 LINE L1 -998 4882 4372 1 1291 427 290 95 77 chrX 92589827 92590143 -74060153 - L1M2 LINE L1 -2163 3717 3401 1 1291 553 251 177 0 chrX 92590143 92590318 -74059978 - B3 SINE B2 -10 206 1 1 1291 427 290 95 77 chrX 92590318 92590588 -74059708 - L1M2 LINE L1 -2480 3400 3120 1 1291 1700 115 0 0 chrX 92590649 92590902 -74059394 - L1_Mm LINE L1 -2265 3618 3366 1 1291 3374 178 21 49 chrX 92590932 92591735 -74058561 - L1VL4 LINE L1 -5344 958 178 1 1291 475 122 146 0 chrX 92591860 92591983 -74058313 + L1_Mus2 LINE L1 6426 6566 0 1 1291 405 237 129 8 chrX 92591982 92592114 -74058182 + Lx7 LINE L1 6129 6276 -1420 1 1291 4826 101 51 0 chrX 92592690 92593381 -74056915 - L1_Mus4 LINE L1 -5 6631 5906 1 1291 1967 113 96 23 chrX 92593627 92593730 -74056566 - Lx LINE L1 -55 6599 6470 1 1291 3021 70 0 43 chrX 92593730 92594146 -74056150 + MTB LTR MaLR 1 398 -2 1 1291 1967 113 96 23 chrX 92594146 92594396 -74055900 - Lx LINE L1 -185 6469 6220 1 1291 227 217 0 0 chrX 92594401 92594461 -74055835 - L1MD LINE L1 -912 5447 5388 1 1291 1609 203 55 13 chrX 92594478 92594863 -74055433 + Lx6 LINE L1 5613 6013 -1447 1 1291 3997 220 125 30 chrX 92594860 92595684 -74054612 + Lx6 LINE L1 6134 7111 -349 1 1291 432 0 0 0 chrX 92595684 92595732 -74054564 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1291 3997 219 129 32 chrX 92595732 92596064 -74054232 + Lx6 LINE L1 7112 7459 -1 1 1291 2680 184 16 9 chrX 92596349 92596885 -74053411 - Lx2 LINE L1 -453 6544 6027 1 1291 263 156 0 0 chrX 92596869 92596914 -74053382 - Lx2 LINE L1 -477 6520 6476 1 1291 3407 111 19 2 chrX 92596936 92597535 -74052761 - Lx2 LINE L1 -895 6102 5483 1 1291 194 91 30 0 chrX 92597535 92597568 -74052728 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 1291 432 205 8 16 chrX 92597570 92597694 -74052602 + Lx9 LINE L1 7513 7635 -9 1 1291 4828 96 3 19 chrX 92597988 92598326 -74051970 + L1_Mus3 LINE L1 5944 6281 -357 1 1291 2687 59 24 0 chrX 92598326 92598664 -74051632 + ORR1A1 LTR MaLR 1 346 0 1 1291 4828 96 3 19 chrX 92598664 92599023 -74051273 + L1_Mus3 LINE L1 6282 6630 -8 1 1291 237 146 0 0 chrX 92599597 92599645 -74050651 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1291 410 311 19 0 chrX 92599653 92599759 -74050537 - B3A SINE B2 -42 156 49 1 1291 453 289 20 7 chrX 92599927 92600077 -74050219 + RMER15-int LTR ERVL 4603 4754 -245 1 1291 25 75 0 0 chrX 92600078 92600131 -74050165 + AT_rich Low_complexity Low_complexity 1 53 0 1 1291 1869 33 33 8 chrX 92600829 92601073 -74049223 + L1Md_F2 LINE L1 5337 5586 -297 1 1291 7809 55 4 21 chrX 92601073 92602083 -74048213 + L1Md_F2 LINE L1 5587 6579 -3 1 1291 1141 175 26 21 chrX 92602123 92602316 -74047980 + B3 SINE B2 18 211 -5 1 1291 854 156 13 19 chrX 92602547 92602704 -74047592 + RMER21B LTR ERV1 1 156 -686 1 1291 8181 118 41 4 chrX 92602761 92603991 -74046305 - Lx4A LINE L1 -1 7057 5783 1 1291 1110 78 0 0 chrX 92604004 92604146 -74046150 - B1_Mus2 SINE Alu 0 147 6 1 1291 4292 133 38 27 chrX 92604146 92604927 -74045369 - L1_Mur2 LINE L1 -92 5785 4996 1 1291 423 284 356 38 chrX 92605056 92605491 -74044805 + L2a LINE L2 2857 3425 -1 1 1291 450 267 19 0 chrX 92605721 92605826 -74044470 - PB1D10 SINE Alu 0 117 11 1 1291 255 255 18 18 chrX 92605869 92605925 -74044371 - tRNA-Ala-GCY_ tRNA tRNA -2 73 18 1 1291 243 277 46 0 chrX 92605880 92605945 -74044351 - ID SINE ID -154 70 3 1 1291 313 316 76 0 chrX 92606698 92606713 -74043583 + B4 SINE B4 65 85 -207 1 1291 586 250 63 14 chrX 92606713 92606855 -74043441 + B1_Mur3 SINE Alu 1 149 0 1 1291 35493 4 0 0 chrX 92607777 92614122 -74036174 - L1Md_A LINE L1 0 6582 237 1 1291 272 213 26 26 chrX 92614438 92614515 -74035781 + Lx8 LINE L1 7388 7464 -9 1 1291 416 286 36 0 chrX 92614758 92614870 -74035426 + B1_Mur2 SINE Alu 2 117 -32 1 1291 447 52 0 0 chrX 92615078 92615136 -74035160 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1291 183 42 0 0 chrX 92616987 92617011 -74033285 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 1291 644 239 7 28 chrX 92618779 92618921 -74031375 - B1_Mur1 SINE Alu -9 140 2 1 1291 527 189 9 0 chrX 92619059 92619165 -74031131 + B1_Mur1 SINE Alu 41 147 -2 1 1291 756 0 0 0 chrX 92622622 92622706 -74027590 + (TTC)n Simple_repeat Simple_repeat 1 84 0 1 1291 16354 52 3 1 chrX 92624054 92626066 -74024230 + L1_Mm LINE L1 3570 5586 -297 1 1291 8069 54 6 3 chrX 92626066 92627056 -74023240 + L1Md_F2 LINE L1 5587 6579 -3 1 1291 760 200 7 7 chrX 92627340 92627481 -74022815 + B1_Mur2 SINE Alu 1 141 -8 1 1291 211 176 0 38 chrX 92627481 92627524 -74022772 + A-rich Low_complexity Low_complexity 13 53 0 1 1291 21 0 0 0 chrX 92627706 92627727 -74022569 + AT_rich Low_complexity Low_complexity 1 21 0 1 1291 233 29 0 29 chrX 92628150 92628185 -74022111 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1291 307 0 0 0 chrX 92629142 92629186 -74021110 + L1Md_T LINE L1 6539 6582 0 1 1291 713 153 16 0 chrX 92630292 92630416 -74019880 - B1_Mur2 SINE Alu -1 148 23 1 1291 2000 239 102 16 chrX 92630511 92631217 -74019079 + Lx8 LINE L1 6705 7471 -2 1 1291 203 173 19 0 chrX 92631221 92631273 -74019023 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 1 1291 1160 258 47 19 chrX 92631438 92631758 -74018538 + ORR1D2 LTR MaLR 2 330 -40 1 1291 234 0 47 47 chrX 92631767 92631810 -74018486 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 1 1291 1769 191 61 32 chrX 92631815 92632258 -74018038 + ORR1D2-int LTR MaLR 50 505 -865 1 1291 356 318 77 15 chrX 92633270 92633465 -74016831 + MIRb SINE MIR 42 248 -20 1 1291 234 0 0 0 chrX 92634280 92634306 -74015990 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 1 1291 29 0 0 0 chrX 92634454 92634483 -74015813 + AT_rich Low_complexity Low_complexity 1 29 0 1 1291 195 42 0 0 chrX 92635503 92635527 -74014769 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 1 1291 263 127 16 0 chrX 92636223 92636286 -74014010 + (CAAAAA)n Simple_repeat Simple_repeat 2 65 0 1 1291 554 233 74 15 chrX 92637306 92637441 -74012855 + B1_Mur2 SINE Alu 5 147 -2 1 1291 423 0 0 0 chrX 92638504 92638551 -74011745 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 1 1291 1107 68 7 7 chrX 92641033 92641180 -74009116 + B1_Mm SINE Alu 1 147 0 1 1291 20801 123 66 60 chrX 92642334 92644124 -74006172 + Lx3_Mus LINE L1 39 2154 -3732 1 1291 941 72 0 86 chrX 92644124 92644146 -74006150 + B1_Mus1 SINE Alu 2 23 -125 1 1291 643 43 32 0 chrX 92644146 92644240 -74006056 - L1Md_T LINE L1 -4 6578 6482 1 1291 941 85 0 0 chrX 92644240 92644369 -74005927 + B1_Mus2 SINE Alu 11 139 -8 1 1291 20801 85 18 59 chrX 92644369 92644875 -74005421 + Lx3_Mus LINE L1 2155 2653 -3233 1 1291 1328 58 5 5 chrX 92644875 92645082 -74005214 + (GAAA)n Simple_repeat Simple_repeat 1 207 0 1 1291 20801 85 18 59 chrX 92645082 92646744 -74003552 + Lx3_Mus LINE L1 2654 4323 -1563 1 1291 10605 72 8 10 chrX 92646741 92648394 -74001902 + Lx3_Mus LINE L1 5363 7009 0 1 1291 329 200 122 0 chrX 92648578 92648668 -74001628 + Lx6 LINE L1 7309 7409 -51 1 1291 963 115 0 0 chrX 92648677 92648825 -74001471 + (GA)n Simple_repeat Simple_repeat 1 148 0 1 1291 2401 146 44 12 chrX 92649405 92649813 -74000483 + MTC LTR MaLR 1 421 0 2 1291 2681 222 61 95 chrX 92649813 92650570 -73999726 + MTC-int LTR MaLR 1 731 -367 2 1291 531 0 0 0 chrX 92650570 92650629 -73999667 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 1291 348 24 0 0 chrX 92650629 92650669 -73999627 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1291 2681 216 59 94 chrX 92650669 92650915 -73999381 + MTC-int LTR MaLR 732 951 -147 2 1291 1328 161 20 16 chrX 92650912 92651158 -73999138 + MTC LTR MaLR 173 419 -2 2 1291 704 295 114 65 chrX 92651254 92651595 -73998701 - ORR1E LTR MaLR 0 359 2 2 1291 669 281 136 8 chrX 92651595 92651830 -73998466 - ORR1E-int LTR MaLR -52 1528 1261 2 1291 263 261 72 0 chrX 92651843 92651912 -73998384 + PB1D9 SINE Alu 21 94 -26 2 1291 761 31 10 0 chrX 92651920 92652016 -73998280 + (TAGA)n Simple_repeat Simple_repeat 4 100 0 2 1291 591 112 0 0 chrX 92652022 92652111 -73998185 + (GA)n Simple_repeat Simple_repeat 1 89 0 2 1291 876 308 66 26 chrX 92652113 92652416 -73997880 - ORR1E-int LTR MaLR -282 1298 984 2 1291 579 248 7 41 chrX 92652465 92652612 -73997684 - RSINE1 SINE B4 -19 146 5 2 1291 1520 284 109 47 chrX 92652599 92653499 -73996797 - ORR1E-int LTR MaLR -567 1013 31 2 1291 454 264 0 126 chrX 92653518 92653661 -73996635 - B3A SINE B2 -72 126 2 2 1291 283 275 27 9 chrX 92653703 92653813 -73996483 - L2a LINE L2 -284 3142 3031 2 1291 1347 93 0 76 chrX 92654235 92654419 -73995877 + B2_Mm2 SINE B2 2 171 -24 2 1291 1153 69 7 0 chrX 92654419 92654564 -73995732 - B1_Mus1 SINE Alu -1 147 2 2 1291 1347 93 0 76 chrX 92654564 92654589 -73995707 + B2_Mm2 SINE B2 172 195 0 2 1291 509 267 14 29 chrX 92654863 92655002 -73995294 + RSINE1 SINE B4 15 151 -14 2 1291 749 223 99 34 chrX 92655556 92655849 -73994447 - L1MA7 LINE L1 -2 6289 5978 2 1291 237 263 40 40 chrX 92655852 92655951 -73994345 + L1MA7 LINE L1 5878 5976 -324 2 1291 183 42 0 0 chrX 92656030 92656054 -73994242 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1291 1120 52 0 7 chrX 92656055 92656192 -73994104 - B1_Mm SINE Alu -11 136 1 2 1291 1636 120 15 8 chrX 92656208 92656468 -73993828 + RLTR27 LTR ERVK 48 309 0 2 1291 355 97 7 11 chrX 92656492 92656546 -73993750 + MMERVK10C-int LTR ERVK 162 267 -7314 2 1291 672 236 62 46 chrX 92656578 92656773 -73993523 + MMERVK10C-int LTR ERVK 655 852 -1135 2 1291 333 269 118 18 chrX 92656872 92656982 -73993314 + MMERVK10C-int LTR ERVK 795 915 -6765 2 1291 3691 320 29 39 chrX 92657129 92659321 -73990975 + MMERVK10C-int LTR ERVK 1127 3296 -4285 2 1291 539 17 0 0 chrX 92659321 92659381 -73990915 - L1_Mm LINE L1 -964 4919 4860 2 1291 1300 34 0 0 chrX 92659379 92659527 -73990769 + L1Md_F2 LINE L1 5439 5586 -297 2 1291 8181 39 8 15 chrX 92659527 92660529 -73989767 + L1Md_F2 LINE L1 5587 6581 -1 2 1291 3644 295 58 43 chrX 92660726 92662881 -73987415 + MMERVK10C-int LTR ERVK 3289 5476 -2105 2 1291 375 285 30 37 chrX 92663371 92663535 -73986761 + MMERVK10C-int LTR ERVK 6907 7069 -512 2 1291 1480 169 0 22 chrX 92663669 92663936 -73986360 + MMERVK10C-int LTR ERVK 7321 7581 0 2 1291 2208 112 13 3 chrX 92663936 92664242 -73986054 + RLTR27 LTR ERVK 1 309 0 2 1291 216 0 0 0 chrX 92664369 92664393 -73985903 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 1291 1091 94 94 6 chrX 92664707 92664878 -73985418 - Lx LINE L1 0 6654 6469 2 1292 296 352 8 25 chrX 92668347 92668486 -73981810 + MIRm SINE MIR 39 175 -93 2 1292 510 105 19 28 chrX 92668796 92668872 -73981424 + polypyrimidine Low_complexity Low_complexity 36 110 0 2 1292 1249 33 0 43 chrX 92668872 92669060 -73981236 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 2 1292 510 105 19 28 chrX 92669060 92669091 -73981205 + polypyrimidine Low_complexity Low_complexity 5 35 0 2 1292 354 128 0 0 chrX 92669106 92669153 -73981143 - ID4_ SINE ID -16 67 21 2 1292 297 279 0 62 chrX 92669674 92669713 -73980583 + ID_B1 SINE B4 63 125 -99 2 1292 314 143 0 39 chrX 92669713 92669764 -73980532 + PB1D9 SINE Alu 6 54 -66 2 1292 297 279 0 62 chrX 92669764 92669776 -73980520 + ID_B1 SINE B4 126 147 -77 2 1292 517 167 0 53 chrX 92669827 92669922 -73980374 + B1_Mur3 SINE Alu 40 129 -20 2 1292 254 220 209 0 chrX 92670093 92670184 -73980112 + L1MA4 LINE L1 4765 4874 -1269 2 1292 246 95 0 0 chrX 92670184 92670226 -73980070 + (A)n Simple_repeat Simple_repeat 1 42 0 2 1292 186 71 0 0 chrX 92670236 92670264 -73980032 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 2 1292 1049 260 26 13 chrX 92670279 92670669 -73979627 + L1MA4 LINE L1 4886 5280 -863 2 1292 711 290 55 6 chrX 92670657 92670987 -73979309 + L1MA4 LINE L1 5593 5938 -362 2 1292 21 57 0 0 chrX 92671197 92671232 -73979064 + AT_rich Low_complexity Low_complexity 1 35 0 2 1292 527 299 58 0 chrX 92671237 92671374 -73978922 - B1_Mur1 SINE Alu -1 148 4 2 1292 187 375 62 10 chrX 92671612 92671709 -73978587 - MIR3 SINE MIR -21 187 86 2 1292 187 383 8 62 chrX 92671802 92671930 -73978366 - MIR SINE MIR -57 151 31 2 1292 495 304 108 48 chrX 92672448 92672783 -73977513 - Charlie4 DNA MER1_type -152 356 2 2 1292 372 276 57 9 chrX 92672949 92673055 -73977241 + PB1 SINE Alu 10 120 -7 2 1292 29 0 0 0 chrX 92673087 92673116 -73977180 + AT_rich Low_complexity Low_complexity 1 29 0 2 1292 1491 267 37 27 chrX 92674271 92674752 -73975544 + Lx8 LINE L1 6629 7114 -359 2 1292 265 200 0 35 chrX 92674858 92674915 -73975381 + RMER15 LTR ERVL 404 458 -117 2 1292 700 108 14 0 chrX 92674930 92675069 -73975227 + (GA)n Simple_repeat Simple_repeat 2 142 0 2 1292 734 110 17 0 chrX 92675068 92675186 -73975110 + (GAAAA)n Simple_repeat Simple_repeat 3 122 0 2 1292 459 132 314 13 chrX 92675357 92675510 -73974786 - L1_Rod LINE L1 -525 5322 5124 2 1292 678 13 0 0 chrX 92675516 92675595 -73974701 + (TC)n Simple_repeat Simple_repeat 2 80 0 2 1292 276 30 0 0 chrX 92675595 92675627 -73974669 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1292 378 335 27 21 chrX 92675968 92676154 -73974142 - L1MCa LINE L1 -6200 308 122 2 1292 331 313 26 9 chrX 92676649 92676765 -73973531 - L1MCa LINE L1 -6387 121 4 2 1292 457 292 120 18 chrX 92676789 92677190 -73973106 - L1MD LINE L1 -3247 2899 2458 2 1292 361 309 35 116 chrX 92677288 92677301 -73972995 - B4 SINE B4 -62 230 220 2 1292 369 0 0 0 chrX 92677301 92677342 -73972954 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 2 1292 660 239 15 0 chrX 92677344 92677478 -73972818 - B1_Mus2 SINE Alu -6 141 6 2 1292 361 309 35 116 chrX 92677478 92677500 -73972796 - B4 SINE B4 -73 217 73 2 1292 443 301 29 14 chrX 92677579 92677717 -73972579 - B1F2 SINE Alu -9 140 1 2 1292 3246 136 73 4 chrX 92678135 92678672 -73971624 + Lx2 LINE L1 6424 6997 0 2 1292 5007 120 6 30 chrX 92680059 92681069 -73969227 + L1Md_F LINE L1 380 1366 -4517 2 1292 198 0 0 0 chrX 92681184 92681206 -73969090 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1292 1415 39 28 0 chrX 92681206 92681384 -73968912 + L1Md_F2 LINE L1 6382 6564 -18 2 1292 3339 86 0 0 chrX 92681403 92681866 -73968430 + L1Md_F2 LINE L1 5123 5585 -298 2 1292 7560 76 2 1 chrX 92681867 92682851 -73967445 + L1Md_F2 LINE L1 5587 6571 -11 2 1292 240 111 0 0 chrX 92683127 92683163 -73967133 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1292 325 293 33 77 chrX 92683195 92683376 -73966920 - L1MB7 LINE L1 -305 5879 5707 2 1292 552 30 0 0 chrX 92683428 92683494 -73966802 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 1292 251 73 0 105 chrX 92684122 92684198 -73966098 + (CAAA)n Simple_repeat Simple_repeat 2 69 0 2 1292 1625 176 86 59 chrX 92684556 92684930 -73965366 + ORR1C2 LTR MaLR 1 384 0 2 1292 315 232 58 101 chrX 92685207 92685346 -73964950 + RMER15 LTR ERVL 386 518 -57 2 1292 471 18 0 0 chrX 92686211 92686267 -73964029 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 1292 424 179 108 93 chrX 92686440 92686569 -73963727 + RLTR42-int LTR ERVK 3993 4123 -1399 2 1292 204 40 0 0 chrX 92686672 92686697 -73963599 + (TTA)n Simple_repeat Simple_repeat 3 27 0 2 1292 305 186 34 0 chrX 92686702 92686761 -73963535 - ID SINE ID -162 62 2 2 1292 232 171 0 0 chrX 92686846 92686887 -73963409 - U1 snRNA snRNA -124 41 1 2 1292 2349 99 28 17 chrX 92686895 92687253 -73963043 - L1_Mus4 LINE L1 -6 6630 6269 2 1292 1125 66 0 0 chrX 92687254 92687406 -73962890 + L1_Mus4 LINE L1 6133 6284 -352 2 1292 648 205 25 19 chrX 92687534 92687693 -73962603 + RLTR42-int LTR ERVK 4257 4416 -1106 2 1292 990 248 56 10 chrX 92687692 92687997 -73962299 + RLTR42-int LTR ERVK 4559 4877 -645 2 1292 189 74 0 0 chrX 92688399 92688426 -73961870 + (CTAA)n Simple_repeat Simple_repeat 2 28 0 2 1292 4531 187 79 14 chrX 92688426 92689398 -73960898 + Lx5 LINE L1 6016 7050 0 2 1292 354 45 0 0 chrX 92689400 92689444 -73960852 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 2 1292 3270 134 37 28 chrX 92689452 92689996 -73960300 + RMER4B LTR ERVK 37 585 0 2 1292 238 307 13 0 chrX 92690582 92690657 -73959639 + ORR1E LTR MaLR 280 355 -4 2 1292 308 362 0 0 chrX 92690667 92690841 -73959455 + (CCCTAA)n Simple_repeat Simple_repeat 5 178 0 2 1292 348 305 36 6 chrX 92691047 92691290 -73959006 + (CCCTAA)n Simple_repeat Simple_repeat 1 250 0 2 1292 388 316 6 17 chrX 92691413 92691587 -73958709 + (CCCTAA)n Simple_repeat Simple_repeat 3 174 0 2 1292 723 246 93 60 chrX 92691694 92691876 -73958420 - B3 SINE B2 -7 188 1 2 1292 277 347 27 0 chrX 92691976 92692126 -73958170 + (CCCTAG)n Simple_repeat Simple_repeat 2 155 0 2 1292 212 323 21 0 chrX 92692189 92692285 -73958011 + (CCCTAA)n Simple_repeat Simple_repeat 5 102 0 2 1292 392 230 126 0 chrX 92692308 92692395 -73957901 + MTD LTR MaLR 1 98 -321 2 1292 1250 176 41 14 chrX 92692762 92693313 -73956983 + Lx3_Mus LINE L1 889 1514 -4363 2 1292 3525 98 50 9 chrX 92693310 92693884 -73956412 - Lx3B LINE L1 -622 6351 5754 2 1292 3624 151 38 12 chrX 92693884 92694486 -73955810 + Lx3B LINE L1 6351 6968 -5 2 1292 3704 151 20 58 chrX 92694495 92695106 -73955190 + Lx3_Mus LINE L1 1486 2064 -3813 2 1292 339 85 0 0 chrX 92695106 92695153 -73955143 + (CTA)n Simple_repeat Simple_repeat 3 49 0 2 1292 3704 151 20 58 chrX 92695153 92695448 -73954848 + Lx3_Mus LINE L1 2065 2357 -3520 2 1292 1472 272 87 70 chrX 92695448 92696135 -73954161 - RMER19C LTR ERVK 0 737 7 2 1292 15502 152 19 129 chrX 92696139 92697032 -73953264 + Lx3_Mus LINE L1 2350 3253 -2624 2 1292 1119 84 0 0 chrX 92697032 92697174 -73953122 + B1_Mus1 SINE Alu 1 142 -6 2 1292 15502 152 19 129 chrX 92697174 92699323 -73950973 + Lx3_Mus LINE L1 3254 5003 -874 2 1292 3856 49 2 38 chrX 92699323 92699830 -73950466 - L1_Mus2 LINE L1 -1 6565 6077 2 1292 15502 115 71 46 chrX 92699830 92701769 -73948527 + Lx3_Mus LINE L1 5004 7007 -2 2 1292 7371 161 54 6 chrX 92701771 92703371 -73946925 + Lx5 LINE L1 5356 7047 -3 2 1292 818 309 48 19 chrX 92703411 92703681 -73946615 + B4A SINE B4 1 278 -14 2 1292 809 318 25 89 chrX 92703702 92704027 -73946269 + MTE2b LTR MaLR 22 325 -54 2 1292 1025 204 110 53 chrX 92704041 92704305 -73945991 + MTD LTR MaLR 91 369 -50 2 1292 390 323 24 12 chrX 92704454 92704623 -73945673 + (CCCTAG)n Simple_repeat Simple_repeat 4 174 0 2 1292 769 153 273 0 chrX 92705185 92705361 -73944935 - URR1B DNA MER1_type 0 225 2 2 1292 1244 50 6 0 chrX 92706539 92706698 -73943598 - L1_Mus1 LINE L1 0 6567 6408 2 1292 3113 242 19 30 chrX 92706872 92707734 -73942562 - Lx7 LINE L1 -336 7360 6509 2 1292 245 274 8 34 chrX 92707755 92707872 -73942424 + Lx7 LINE L1 7565 7678 -18 2 1292 458 313 46 18 chrX 92707938 92708156 -73942140 + ID_B1 SINE B4 1 224 0 2 1292 316 333 39 19 chrX 92708220 92708324 -73941972 + PB1D7 SINE Alu 1 106 -14 2 1292 416 269 21 0 chrX 92708527 92708620 -73941676 - PB1D10 SINE Alu 0 117 23 2 1292 378 171 0 14 chrX 92709130 92709201 -73941095 + ORR1A4 LTR MaLR 260 329 0 3 1292 285 318 57 0 chrX 92709254 92709342 -73940954 + PB1D10 SINE Alu 3 95 -22 3 1292 1223 247 83 12 chrX 92709653 92710516 -73939780 + Lx6 LINE L1 63 1221 -6507 3 1292 4282 175 46 52 chrX 92710501 92711706 -73938590 + Lx6 LINE L1 1153 2348 -3532 3 1292 5253 223 127 13 chrX 92711707 92713503 -73936793 + Lx6 LINE L1 5335 7334 -126 3 1292 456 18 0 0 chrX 92713631 92713641 -73936655 + (TG)n Simple_repeat Simple_repeat 1 10 0 3 1292 459 0 0 0 chrX 92713641 92713692 -73936604 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 1292 456 18 0 0 chrX 92713692 92713736 -73936560 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1292 524 286 0 16 chrX 92713736 92713857 -73936439 - ID_B1 SINE B4 -19 205 87 3 1292 526 324 35 0 chrX 92714166 92714308 -73935988 + RSINE1 SINE B4 2 148 -17 3 1292 229 307 40 13 chrX 92714390 92714466 -73935830 + MamRep434 DNA TcMar 13 90 -336 3 1292 258 32 0 0 chrX 92714470 92714501 -73935795 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 3 1292 238 257 9 9 chrX 92717481 92717587 -73932709 + L1M3c LINE L1 1350 1455 -4686 3 1292 301 387 0 0 chrX 92717612 92717705 -73932591 + L1M4c LINE L1 1202 1294 -5090 3 1292 665 134 152 0 chrX 92717730 92717842 -73932454 + B1_Mur4 SINE Alu 2 130 -20 3 1292 208 77 0 49 chrX 92717844 92717885 -73932411 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1292 612 176 101 0 chrX 92717905 92718024 -73932272 + B1_Mur1 SINE Alu 3 133 -16 3 1292 387 0 0 0 chrX 92718075 92718118 -73932178 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1292 408 290 57 70 chrX 92718121 92718492 -73931804 + L1M4c LINE L1 1396 1761 -4623 3 1292 532 0 0 29 chrX 92718798 92718868 -73931428 + (CAAAA)n Simple_repeat Simple_repeat 3 70 0 3 1292 466 324 15 7 chrX 92719214 92719351 -73930945 - ID_B1 SINE B4 -8 216 79 3 1292 1255 195 25 40 chrX 92719903 92720181 -73930115 - RLTR46 LTR ERVK -5 315 42 3 1292 1090 224 69 20 chrX 92720485 92720731 -73929565 + ORR1D2 LTR MaLR 1 258 -112 3 1292 1949 209 39 25 chrX 92720902 92721421 -73928875 + Lx7 LINE L1 5791 6316 -1380 3 1292 599 310 23 12 chrX 92721495 92721738 -73928558 - Lx6 LINE L1 -77 7383 7184 3 1292 474 83 0 0 chrX 92722008 92722080 -73928216 + (TC)n Simple_repeat Simple_repeat 1 72 0 3 1292 495 0 0 0 chrX 92722080 92722135 -73928161 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1292 631 255 0 34 chrX 92722137 92722283 -73928013 - B3A SINE B2 -57 141 1 3 1292 243 146 0 0 chrX 92722319 92722360 -73927936 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1292 245 241 163 69 chrX 92722660 92722808 -73927488 - MIR3 SINE MIR -49 159 2 3 1292 3217 154 69 5 chrX 92724193 92724786 -73925510 + RMER6D LTR ERVK 1 631 -89 3 1292 222 62 0 0 chrX 92725072 92725104 -73925192 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1292 220 346 81 45 chrX 92725117 92725338 -73924958 - MIRb SINE MIR -3 265 37 3 1292 5089 112 9 32 chrX 92725533 92726436 -73923860 - L1_Mur1 LINE L1 -2028 3858 2977 3 1292 4199 194 19 62 chrX 92726437 92726532 -73923764 + Lx3B LINE L1 5939 6029 -980 3 1292 1210 55 0 0 chrX 92726532 92726678 -73923618 + B1_Mm SINE Alu 2 147 0 3 1292 5586 120 34 9 chrX 92726678 92727653 -73922643 + Lx3B LINE L1 5999 6963 -46 3 1292 285 29 0 0 chrX 92727655 92727689 -73922607 + (ATG)n Simple_repeat Simple_repeat 1 34 0 3 1292 270 204 0 20 chrX 92727810 92727860 -73922436 - B1_Mur1 SINE Alu 0 149 101 3 1292 237 200 36 0 chrX 92728455 92728510 -73921786 + (CATA)n Simple_repeat Simple_repeat 3 59 0 3 1292 497 279 55 17 chrX 92728511 92728748 -73921548 - Lx9 LINE L1 -126 7518 7273 3 1292 1164 235 104 29 chrX 92728751 92729097 -73921199 - ORR1D1 LTR MaLR -2 372 1 3 1292 3951 163 19 28 chrX 92729241 92730040 -73920256 - L1_Mur2 LINE L1 -620 5257 4466 3 1292 1471 108 0 0 chrX 92730041 92730266 -73920030 + Lx LINE L1 5856 6074 -580 3 1292 3571 66 10 32 chrX 92730418 92730921 -73919375 + L1Md_F2 LINE L1 6091 6582 0 3 1292 5375 121 22 13 chrX 92730918 92731764 -73918532 + Lx LINE L1 5801 6654 0 3 1292 288 220 40 99 chrX 92731787 92731888 -73918408 - Lx9 LINE L1 -564 7080 6986 3 1292 5731 91 9 14 chrX 92732337 92733182 -73917114 + L1_Mus3 LINE L1 5798 6638 0 3 1292 29 28 0 0 chrX 92733182 92733218 -73917078 + AT_rich Low_complexity Low_complexity 1 36 0 3 1292 16094 103 13 9 chrX 92733416 92736811 -73913485 + L1_Mus3 LINE L1 3228 6637 -1 3 1292 36 23 0 0 chrX 92737014 92737057 -73913239 + AT_rich Low_complexity Low_complexity 1 43 0 3 1292 213 156 22 0 chrX 92738334 92738379 -73911917 + T-rich Low_complexity Low_complexity 2 47 0 3 1292 346 277 55 61 chrX 92738616 92738781 -73911515 + RSINE1 SINE B4 2 165 0 3 1292 192 77 0 0 chrX 92740384 92740410 -73909886 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 1292 26 64 0 0 chrX 92740488 92740535 -73909761 + AT_rich Low_complexity Low_complexity 1 47 0 3 1292 351 98 0 0 chrX 92740641 92740702 -73909594 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 3 1292 689 265 0 0 chrX 92740733 92740880 -73909416 + B1_Mur3 SINE Alu 3 149 0 3 1292 22 0 0 0 chrX 92740883 92740905 -73909391 + AT_rich Low_complexity Low_complexity 1 22 0 3 1292 5893 61 31 11 chrX 92741255 92742037 -73908259 - L1_Mus2 LINE L1 -1 6565 5769 3 1292 921 250 19 0 chrX 92742188 92742400 -73907896 + B3 SINE B2 1 216 0 3 1292 21 36 0 0 chrX 92742821 92742849 -73907447 + AT_rich Low_complexity Low_complexity 1 28 0 3 1292 408 143 0 0 chrX 92743408 92743492 -73906804 + (ATTG)n Simple_repeat Simple_repeat 2 85 0 3 1292 255 271 0 0 chrX 92743592 92743651 -73906645 + RMER1B Other Other 448 506 -560 3 1292 2068 161 64 58 chrX 92743646 92744081 -73906215 + RMER1B Other Other 620 1057 -9 3 1292 667 242 15 0 chrX 92744112 92744244 -73906052 + B1_Mur1 SINE Alu 1 134 -15 3 1292 274 332 86 17 chrX 92744247 92744480 -73905816 + L1M2 LINE L1 3982 4230 -1913 3 1292 228 287 24 39 chrX 92744484 92744611 -73905685 - Lx8 LINE L1 -13 7460 7336 3 1292 1593 252 24 5 chrX 92744619 92745042 -73905254 - Lx8 LINE L1 -360 7113 6683 3 1292 255 288 0 0 chrX 92745143 92745216 -73905080 - Lx8 LINE L1 -978 6495 6423 3 1292 310 221 0 42 chrX 92745213 92745284 -73905012 - Lx8 LINE L1 -1157 6316 6249 3 1292 326 333 27 81 chrX 92745284 92745395 -73904901 - B1F2 SINE Alu -41 108 4 3 1292 636 296 14 7 chrX 92745395 92745471 -73904825 - ID SINE ID -140 84 8 3 1292 2732 180 21 67 chrX 92745464 92745700 -73904596 + RMER6C LTR ERVK 96 329 -361 3 1292 513 0 0 0 chrX 92745700 92745757 -73904539 + (GA)n Simple_repeat Simple_repeat 2 58 0 3 1292 2732 180 21 67 chrX 92745757 92746144 -73904152 + RMER6C LTR ERVK 330 690 0 3 1292 981 212 19 19 chrX 92746144 92746351 -73903945 + B3 SINE B2 5 211 -5 3 1292 563 329 40 24 chrX 92746375 92746879 -73903417 + L1_Mur3 LINE L1 5048 5559 -321 3 1292 468 308 23 23 chrX 92746956 92747132 -73903164 - Lx6 LINE L1 -27 7433 7258 3 1292 476 32 0 16 chrX 92747140 92747203 -73903093 + (TTTTC)n Simple_repeat Simple_repeat 2 63 0 3 1292 825 149 17 0 chrX 92747203 92747378 -73902918 + CT-rich Low_complexity Low_complexity 3 180 0 3 1292 539 85 12 0 chrX 92747360 92747442 -73902854 + (TC)n Simple_repeat Simple_repeat 2 84 0 3 1292 352 315 54 14 chrX 92747925 92748073 -73902223 - MIR SINE MIR -65 197 44 3 1292 833 149 28 14 chrX 92748626 92748769 -73901527 + B1_Mur3 SINE Alu 2 146 -3 3 1292 294 29 0 0 chrX 92749059 92749094 -73901202 + (TAA)n Simple_repeat Simple_repeat 1 35 0 3 1292 576 108 36 0 chrX 92749537 92749620 -73900676 + ORR1A4 LTR MaLR 244 329 0 3 1292 611 311 10 77 chrX 92750238 92750330 -73899966 + ID SINE ID 5 83 -141 3 1292 341 304 16 87 chrX 92750330 92750456 -73899840 + PB1D10 SINE Alu 1 117 0 3 1292 371 267 167 33 chrX 92751393 92751513 -73898783 - B4 SINE B4 -152 140 5 3 1292 289 320 69 10 chrX 92751708 92751809 -73898487 - PB1D10 SINE Alu -2 115 9 3 1292 446 385 165 15 chrX 92751888 92752489 -73897807 + L2a LINE L2 2536 3217 -209 3 1292 253 317 110 0 chrX 92752909 92752991 -73897305 + L2a LINE L2 3334 3424 -2 3 1292 705 130 8 42 chrX 92754274 92754393 -73895903 - URR1B DNA MER1_type -1 224 110 3 1292 693 171 24 16 chrX 92754393 92754518 -73895778 + RLTR25B LTR ERVK 1 126 -902 3 1292 200 69 155 0 chrX 92754518 92754576 -73895720 + (TAGA)n Simple_repeat Simple_repeat 3 69 0 3 1292 428 136 16 16 chrX 92754577 92754704 -73895592 + (TA)n Simple_repeat Simple_repeat 1 127 0 3 1292 1589 171 37 19 chrX 92754706 92755027 -73895269 + RLTR25B LTR ERVK 478 804 -224 3 1292 277 156 215 15 chrX 92755012 92755077 -73895219 + RLTR25B LTR ERVK 974 1051 -52 3 1292 2665 71 145 139 chrX 92755077 92755586 -73894710 - RLTR1B LTR ERV1 0 512 1 3 1292 4909 48 39 0 chrX 92755586 92756226 -73894070 - RLTR1B-int LTR ERV1 0 3299 2635 3 1292 13445 80 32 33 chrX 92756223 92757807 -73892489 - RLTR1B-int LTR ERV1 -1190 2109 516 3 1292 228 67 0 0 chrX 92757807 92757837 -73892459 + (CTG)n Simple_repeat Simple_repeat 3 32 0 3 1292 13445 83 19 57 chrX 92757837 92758443 -73891853 - RLTR1B-int LTR ERV1 -2784 515 119 3 1292 2304 111 239 26 chrX 92758443 92758895 -73891401 - RLTR1B LTR ERV1 -70 584 37 3 1292 1344 97 18 166 chrX 92759004 92759384 -73890912 - RLTR1B-int LTR ERV1 -7364 414 1 3 1292 2700 71 143 139 chrX 92759384 92759894 -73890402 - RLTR1B LTR ERV1 0 512 1 3 1292 379 91 18 0 chrX 92759894 92759949 -73890347 + RLTR25B LTR ERVK 1048 1103 0 3 1292 665 181 0 49 chrX 92759949 92760071 -73890225 - URR1B DNA MER1_type -110 115 1 3 1292 555 297 0 68 chrX 92760470 92760618 -73889678 + RSINE1 SINE B4 28 165 0 3 1292 7392 25 0 2 chrX 92761059 92761919 -73888377 + L1Md_F3 LINE L1 5712 6569 -15 3 1292 21 71 0 0 chrX 92761931 92761973 -73888323 + AT_rich Low_complexity Low_complexity 1 42 0 3 1292 4320 20 0 8 chrX 92762310 92762807 -73887489 + MT2_Mm LTR ERVL 1 493 0 3 1292 45621 17 0 0 chrX 92762807 92768166 -73882130 + MERVL-int LTR ERVL 1 5360 -125 3 1292 390 167 46 35 chrX 92768166 92768253 -73882043 + ORR1A3-int LTR MaLR 553 640 -1323 3 1292 302 0 0 0 chrX 92768253 92768291 -73882005 + MERVL-int LTR ERVL 5448 5485 0 3 1292 4090 18 0 97 chrX 92768291 92768837 -73881459 + MT2_Mm LTR ERVL 1 493 0 3 1292 371 315 46 0 chrX 92768911 92769019 -73881277 + PB1D7 SINE Alu 5 117 -3 3 1292 1700 249 17 17 chrX 92769233 92769645 -73880651 + Lx8 LINE L1 6201 6612 -861 3 1292 4969 123 24 0 chrX 92769761 92770547 -73879749 + Lx4A LINE L1 5864 6668 -390 3 1292 323 326 149 14 chrX 92771158 92771379 -73878917 + L2a LINE L2 3167 3417 -9 3 1292 180 0 0 0 chrX 92771733 92771753 -73878543 + (TA)n Simple_repeat Simple_repeat 1 20 0 3 1292 1477 63 16 5 chrX 92772774 92772966 -73877330 + B2_Mm2 SINE B2 2 195 0 3 1292 904 258 37 153 chrX 92773032 92773490 -73876806 - L1_Mur3 LINE L1 -2078 3802 3400 3 1292 1222 41 7 0 chrX 92773490 92773635 -73876661 - B1_Mm SINE Alu -1 146 1 4 1292 904 258 37 153 chrX 92773635 92773815 -73876481 - L1_Mur3 LINE L1 -2481 3399 3256 3 1292 3980 102 27 18 chrX 92773815 92774412 -73875884 - Lx3A LINE L1 -7 6974 6373 4 1292 904 265 71 97 chrX 92774412 92774616 -73875680 - L1_Mur3 LINE L1 -2857 3286 3071 3 1292 437 262 113 29 chrX 92775733 92776043 -73874253 - MER44A DNA MER2_type -3 336 1 4 1292 4540 230 26 16 chrX 92776071 92776949 -73873347 - Lx5 LINE L1 -1 7049 6170 4 1292 1286 261 83 110 chrX 92776949 92777577 -73872719 + RMER19C LTR ERVK 1 611 0 4 1292 4540 230 26 16 chrX 92777577 92777688 -73872608 - Lx5 LINE L1 -881 6169 6050 4 1292 623 179 0 7 chrX 92777688 92777829 -73872467 + L1_Mur2 LINE L1 5205 5344 -533 4 1292 21 0 0 0 chrX 92778985 92779006 -73871290 + AT_rich Low_complexity Low_complexity 1 21 0 4 1292 829 255 45 10 chrX 92779066 92779268 -73871028 + ORR1D2 LTR MaLR 1 209 -161 4 1292 1422 72 5 0 chrX 92779312 92779505 -73870791 + L1_Mus1 LINE L1 6365 6558 -9 4 1292 30598 73 3 2 chrX 92779505 92784689 -73865607 + L1Md_F2 LINE L1 390 5578 -305 4 1292 7671 48 27 3 chrX 92784692 92785663 -73864633 + L1Md_F2 LINE L1 5587 6580 -2 4 1292 263 75 22 0 chrX 92785815 92785876 -73864420 + L1M4 LINE L1 5233 5294 -852 4 1292 25 31 0 0 chrX 92785909 92785941 -73864355 + AT_rich Low_complexity Low_complexity 1 32 0 4 1292 254 136 23 0 chrX 92785966 92786010 -73864286 + ORR1D2 LTR MaLR 195 239 -131 4 1292 186 43 0 0 chrX 92786056 92786079 -73864217 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1292 647 258 0 0 chrX 92786119 92786251 -73864045 - B1F SINE Alu -17 132 1 4 1292 23 0 0 0 chrX 92787299 92787322 -73862974 + AT_rich Low_complexity Low_complexity 1 23 0 4 1292 268 255 51 0 chrX 92787391 92787489 -73862807 + L1MB8 LINE L1 6064 6166 -12 4 1292 558 0 0 0 chrX 92787723 92787785 -73862511 + (TC)n Simple_repeat Simple_repeat 2 63 0 4 1292 189 0 0 0 chrX 92787785 92787805 -73862491 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1292 543 260 20 27 chrX 92787916 92788066 -73862230 - MTC LTR MaLR -272 149 1 4 1292 181 357 50 30 chrX 92788091 92788192 -73862104 - MIR SINE MIR -141 121 19 4 1292 2385 196 107 44 chrX 92788734 92789343 -73860953 - RLTR40 LTR ERVK -11 806 160 4 1292 276 176 152 48 chrX 92789406 92789531 -73860765 - Lx7 LINE L1 0 7696 7559 4 1292 242 241 24 0 chrX 92789576 92789659 -73860637 + A-rich Low_complexity Low_complexity 4 88 0 4 1292 865 151 56 6 chrX 92789701 92789861 -73860435 - RLTR40 LTR ERVK -649 168 1 4 1292 3223 125 31 19 chrX 92789988 92790501 -73859795 - Lx2 LINE L1 0 6997 6479 4 1292 589 201 278 0 chrX 92791012 92791181 -73859115 + B3 SINE B2 1 216 0 4 1292 450 0 0 0 chrX 92791314 92791364 -73858932 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 4 1292 1872 219 25 78 chrX 92792093 92792569 -73857727 - RLTR28B LTR ERVL -18 463 13 4 1292 444 37 0 0 chrX 92792733 92792787 -73857509 + (TAA)n Simple_repeat Simple_repeat 2 55 0 4 1292 687 163 0 0 chrX 92792830 92792953 -73857343 + GA-rich Low_complexity Low_complexity 2 124 0 4 1292 575 292 88 19 chrX 92793673 92794235 -73856061 - Lx8 LINE L1 -1555 5918 5315 4 1292 27 0 0 0 chrX 92794236 92794263 -73856033 + AT_rich Low_complexity Low_complexity 1 27 0 4 1292 1091 284 10 45 chrX 92794299 92794612 -73855684 - RMER15 LTR ERVL 0 575 274 4 1292 183 129 0 0 chrX 92794654 92794685 -73855611 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 4 1292 686 198 76 13 chrX 92794798 92795010 -73855286 - Lx4B LINE L1 -8 7050 6754 4 1292 1861 196 22 8 chrX 92795160 92795521 -73854775 + MT2A LTR ERVL 1 366 -167 4 1292 1005 296 33 3 chrX 92796282 92796587 -73853709 + RMER15-int LTR ERVL 2247 2560 -2439 4 1292 911 321 30 49 chrX 92796605 92797077 -73853219 + RMER15-int LTR ERVL 4158 4620 -379 4 1292 381 22 0 0 chrX 92797221 92797267 -73853029 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1292 4842 207 42 99 chrX 92797268 92797996 -73852300 - Lx7 LINE L1 -1364 6332 5610 4 1292 2744 63 79 0 chrX 92797996 92798363 -73851933 + MTB LTR MaLR 1 396 -4 4 1292 1552 52 0 20 chrX 92798363 92798559 -73851737 + B2_Mm1t SINE B2 2 193 0 4 161 4842 188 43 171 chrX 92798559 92799323 -73850973 - Lx7 LINE L1 -269 5611 5010 4 1293 3308 54 0 0 chrX 92799323 92799733 -73850563 + L1_Mus1 LINE L1 6157 6566 -1 4 1293 4842 188 43 171 chrX 92799733 92800492 -73849804 - Lx7 LINE L1 -871 5009 4290 4 1293 2468 194 38 104 chrX 92800576 92801100 -73849196 - Lx7 LINE L1 -3921 1959 1467 4 1293 1014 101 0 13 chrX 92801100 92801114 -73849182 - B1_Mus1 SINE Alu 0 148 136 4 1293 342 0 0 0 chrX 92801114 92801152 -73849144 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 4 1293 1014 101 0 13 chrX 92801152 92801287 -73849009 - B1_Mus1 SINE Alu -13 135 1 4 1293 2502 194 38 104 chrX 92801287 92801516 -73848780 - Lx7 LINE L1 -4414 1466 1258 4 1293 1159 114 17 0 chrX 92801516 92801692 -73848604 - Lx2 LINE L1 -1 6996 6818 4 1293 2502 268 57 51 chrX 92801692 92802576 -73847720 - Lx7 LINE L1 -6471 1257 344 4 1293 2187 289 57 24 chrX 92802654 92803839 -73846457 - L1_Mur3 LINE L1 -1910 3970 2747 4 1293 756 248 9 6 chrX 92803830 92804071 -73846225 - L1_Mur3 LINE L1 -1749 4397 4152 4 1293 281 213 26 13 chrX 92804149 92804225 -73846071 - L1_Mur3 LINE L1 -1933 3947 3871 4 1293 1557 277 252 22 chrX 92804268 92804723 -73845573 - Lx9 LINE L1 -792 6852 6348 4 1293 504 0 0 0 chrX 92804723 92804779 -73845517 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 4 1293 1557 270 137 19 chrX 92804779 92805527 -73844769 - Lx9 LINE L1 -1297 6347 5376 4 1293 322 433 22 26 chrX 92806106 92806419 -73843877 + ORR1D-int LTR MaLR 66 377 -1203 4 1293 26768 121 28 60 chrX 92806419 92809628 -73840668 - L1_Mus1 LINE L1 -6 6561 3418 4 1293 531 160 137 20 chrX 92809628 92809730 -73840566 - B1F SINE Alu -7 142 29 4 1293 26768 121 28 60 chrX 92809730 92812947 -73837349 - L1_Mus1 LINE L1 -6 3417 265 4 1293 265 311 16 63 chrX 92812979 92813106 -73837190 + ORR1D-int LTR MaLR 351 471 -1109 4 1293 582 250 106 31 chrX 92813185 92813346 -73836950 + ORR1D1 LTR MaLR 131 303 -71 4 1293 1952 224 30 70 chrX 92813402 92813981 -73836315 + ORR1D-int LTR MaLR 544 1221 -150 4 1293 3337 156 5 14 chrX 92813981 92814711 -73835585 + L1VL4 LINE L1 305 1029 -2530 4 1293 4539 88 1 0 chrX 92814708 92815593 -73834703 + L1Md_F2 LINE L1 5177 6062 -520 4 1293 2585 59 53 0 chrX 92815597 92815934 -73834362 + L1Md_F2 LINE L1 6209 6563 -4 4 1293 9990 103 1 12 chrX 92815966 92818231 -73832065 + L1_Mus2 LINE L1 4329 6565 -1 4 1293 447 79 0 0 chrX 92818310 92818373 -73831923 - L1_Mus2 LINE L1 -238 6328 6266 4 1293 1410 100 5 9 chrX 92818374 92818586 -73831710 + L1_Mus2 LINE L1 6356 6566 0 4 1293 229 206 20 132 chrX 92818684 92818835 -73831461 - Lx9 LINE L1 0 7644 7511 4 1293 2503 233 17 22 chrX 92818971 92819958 -73830338 + L1_Rod LINE L1 922 1901 -3946 4 1293 6517 60 12 2 chrX 92819957 92820846 -73829450 + L1_Mus2 LINE L1 5669 6566 0 4 1293 635 265 23 92 chrX 92820923 92821080 -73829216 + L1_Rod LINE L1 1959 2097 -3750 4 1293 768 55 0 18 chrX 92821080 92821192 -73829104 + L1_Mus1 LINE L1 6458 6567 0 4 1293 635 265 23 92 chrX 92821192 92821364 -73828932 + L1_Rod LINE L1 2098 2266 -3581 4 1293 3361 42 0 5 chrX 92821364 92821769 -73828527 - L1Md_F2 LINE L1 -12 6570 6168 4 1293 635 265 23 92 chrX 92821769 92821829 -73828467 + L1_Rod LINE L1 2267 2322 -3525 4 1293 1185 29 0 7 chrX 92821831 92821972 -73828324 + B1_Mus2 SINE Alu 1 140 -7 4 1293 198 0 0 0 chrX 92821974 92821996 -73828300 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1293 1097 248 57 67 chrX 92822030 92822540 -73827756 + L1_Rod LINE L1 3215 3719 -2128 4 1293 2516 243 79 43 chrX 92822547 92823581 -73826715 + L1_Rod LINE L1 4152 5222 -625 4 1293 2115 188 19 22 chrX 92823623 92824146 -73826150 + Lx3C LINE L1 6441 6995 -5 4 1293 4238 20 12 2 chrX 92824163 92824651 -73825645 + MT2_Mm LTR ERVL 1 493 0 4 1293 212 254 0 53 chrX 92825879 92825954 -73824342 + GA-rich Low_complexity Low_complexity 2 72 0 4 1293 326 280 220 0 chrX 92826206 92826338 -73823958 - B4A SINE B4 -130 162 2 4 1293 528 211 93 53 chrX 92826569 92826719 -73823577 + ID_B1 SINE B4 15 170 -54 4 1293 252 299 49 49 chrX 92826640 92826742 -73823554 + PB1D7 SINE Alu 18 119 -1 4 1293 2698 68 3 0 chrX 92827458 92827828 -73822468 - L1Md_F2 LINE L1 -639 5244 4874 4 1293 2663 48 0 0 chrX 92827824 92828161 -73822135 + L1Md_F2 LINE L1 5250 5586 -297 4 1293 8081 49 0 2 chrX 92828162 92829145 -73821151 + L1Md_F2 LINE L1 5588 6568 -14 4 1293 481 261 18 0 chrX 92829235 92829346 -73820950 - PB1D10 SINE Alu 0 117 5 4 1293 1187 226 28 45 chrX 92829539 92829827 -73820469 - MTD LTR MaLR -2 417 135 4 1293 435 207 0 44 chrX 92829853 92829944 -73820352 - MTD LTR MaLR -282 137 51 4 1293 648 171 138 8 chrX 92829939 92830069 -73820227 + MTC LTR MaLR 254 400 -21 4 1293 300 283 66 16 chrX 92830073 92830256 -73820040 - Kanga2_a DNA Tc2 -107 781 590 4 1293 3345 119 20 10 chrX 92830411 92830919 -73819377 + Lx3C LINE L1 6457 6969 -7 4 1293 788 171 87 103 chrX 92830971 92831166 -73819130 + B3 SINE B2 1 192 -3 4 1293 1591 224 81 16 chrX 92831171 92831771 -73818525 + Lx9 LINE L1 5274 5971 -1673 4 1293 444 37 0 0 chrX 92831996 92832050 -73818246 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1293 2787 269 109 17 chrX 92832050 92833085 -73817211 + Lx9 LINE L1 6342 7471 -173 4 1293 333 0 0 0 chrX 92833085 92833122 -73817174 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1293 1072 95 0 0 chrX 92833284 92833431 -73816865 + B1_Mus1 SINE Alu 2 148 0 4 1293 225 119 0 0 chrX 92833431 92833473 -73816823 + (A)n Simple_repeat Simple_repeat 1 42 0 4 1293 889 169 0 7 chrX 92833762 92833905 -73816391 + B1_Mur4 SINE Alu 3 144 -6 4 1293 324 0 0 0 chrX 92833911 92833947 -73816349 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1293 290 269 80 36 chrX 92836191 92836303 -73813993 + LTR37B LTR ERV1 9 125 -343 4 1293 231 194 90 76 chrX 92836325 92836470 -73813826 - RLTR40 LTR ERVK -101 716 570 4 1293 419 259 26 234 chrX 92836447 92836639 -73813657 - RSINE1 SINE B4 0 165 14 4 1293 403 273 169 77 chrX 92836822 92837147 -73813149 + LTR37B LTR ERV1 114 468 0 4 1293 589 68 0 0 chrX 92837374 92837462 -73812834 + L1_Mus3 LINE L1 6547 6634 -4 4 1293 741 33 0 0 chrX 92838005 92838097 -73812199 + (TC)n Simple_repeat Simple_repeat 1 92 0 4 1293 423 0 0 0 chrX 92838230 92838277 -73812019 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1293 620 275 0 7 chrX 92838293 92838432 -73811864 - RSINE1 SINE B4 -22 143 6 4 1293 287 319 169 14 chrX 92838874 92839093 -73811203 + MIR SINE MIR 5 257 -5 4 1293 279 0 0 0 chrX 92839355 92839386 -73810910 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1293 509 277 78 33 chrX 92839393 92839546 -73810750 + MER5A DNA MER1_type 30 189 0 4 1293 414 0 0 0 chrX 92839698 92839744 -73810552 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1293 262 372 88 0 chrX 92840161 92840309 -73809987 - MIR3 SINE MIR -7 201 41 4 1293 1256 108 11 0 chrX 92840405 92840590 -73809706 - B2_Mm2 SINE B2 -7 188 2 4 1293 349 266 73 9 chrX 92840953 92841063 -73809233 + MER3 DNA MER1_type 93 209 0 4 1293 184 310 17 0 chrX 92841336 92841394 -73808902 - MIRm SINE MIR -103 173 115 4 1293 210 346 51 0 chrX 92841471 92841549 -73808747 + MIRb SINE MIR 24 105 -163 4 1293 351 0 0 0 chrX 92841598 92841637 -73808659 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1293 344 316 51 7 chrX 92841960 92842097 -73808199 + MIR SINE MIR 108 250 -12 4 1293 521 14 0 14 chrX 92842378 92842452 -73807844 + L1Md_F3 LINE L1 6500 6572 -12 5 1293 521 162 45 0 chrX 92843261 92843372 -73806924 + L1_Rod LINE L1 597 712 -6460 5 1293 633 209 25 6 chrX 92843386 92843545 -73806751 + L1_Rod LINE L1 759 920 -6252 5 1293 497 200 60 98 chrX 92843544 92843727 -73806569 + L1_Rod LINE L1 4617 4792 -1055 5 1293 1126 82 118 21 chrX 92843754 92843941 -73806355 - L1Md_F2 LINE L1 0 6582 6378 5 1293 11383 63 1 7 chrX 92843943 92845529 -73804767 + L1_Mm LINE L1 2850 4425 -1458 5 1293 4215 216 21 16 chrX 92845587 92846482 -73803814 - Lx7 LINE L1 -601 7095 6196 5 1293 1231 201 123 54 chrX 92846482 92846644 -73803652 - ORR1C1 LTR MaLR -38 340 164 5 1293 325 52 33 33 chrX 92846644 92846704 -73803592 + (CAGAGA)n Simple_repeat Simple_repeat 2 61 0 5 1293 1231 201 123 54 chrX 92846704 92846857 -73803439 - ORR1C1 LTR MaLR -215 163 4 5 1293 3766 200 112 30 chrX 92846910 92847923 -73802373 + Lx9 LINE L1 6120 7215 -429 5 1293 731 61 20 0 chrX 92847923 92848021 -73802275 + RMER6A LTR ERVK 1 100 -656 5 1293 2036 151 44 11 chrX 92848011 92848374 -73801922 + RMER6A LTR ERVK 382 756 0 5 1293 1695 194 51 5 chrX 92848374 92848656 -73801640 + Lx9 LINE L1 7210 7509 -135 5 1293 200 86 0 28 chrX 92848656 92848692 -73801604 + (TA)n Simple_repeat Simple_repeat 1 35 0 5 1293 1695 194 51 5 chrX 92848692 92848818 -73801478 + Lx9 LINE L1 7510 7636 -8 5 1293 999 289 49 9 chrX 92848821 92849251 -73801045 + L1_Rod LINE L1 2379 2825 -3022 5 1293 308 64 0 21 chrX 92849611 92849659 -73800637 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1293 527 308 165 0 chrX 92849700 92849882 -73800414 - B3 SINE B2 -2 214 3 5 1293 379 221 52 26 chrX 92850025 92850141 -73800155 - L1MDa LINE L1 -4168 2465 2347 5 1293 477 0 0 0 chrX 92850154 92850207 -73800089 + (TA)n Simple_repeat Simple_repeat 1 53 0 5 1293 21 36 0 0 chrX 92850257 92850285 -73800011 + AT_rich Low_complexity Low_complexity 1 28 0 5 1293 536 260 99 61 chrX 92850671 92851064 -73799232 - L1MDa LINE L1 -4674 1959 1552 5 1293 878 244 175 8 chrX 92851279 92851547 -73798749 - ORR1D2 LTR MaLR -57 313 1 5 1293 440 229 38 9 chrX 92851555 92851661 -73798635 - ORR1D2-int LTR MaLR -8 1362 1254 5 1293 279 304 184 0 chrX 92851692 92851899 -73798397 - L1MDa LINE L1 -5392 1241 997 5 1293 401 0 20 0 chrX 92853269 92853318 -73796978 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1293 194 57 0 54 chrX 92853464 92853501 -73796795 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 1293 353 269 180 17 chrX 92854713 92854891 -73795405 - Lx8 LINE L1 -6 7467 7261 5 1293 335 311 0 0 chrX 92855092 92855166 -73795130 - ID4_ SINE ID -4 79 6 5 1293 1170 138 344 4 chrX 92855490 92855772 -73794524 + ORR1C1 LTR MaLR 1 378 0 5 1293 232 212 29 57 chrX 92856817 92856887 -73793409 - RMER4B LTR ERVK -462 123 56 5 1293 227 311 8 25 chrX 92857020 92857142 -73793154 - Lx7 LINE L1 -12 7684 7565 5 1293 3456 290 71 30 chrX 92857165 92858604 -73791692 - Lx7 LINE L1 -329 7367 5870 5 1293 1358 176 83 0 chrX 92858585 92858875 -73791421 + L1_Mur2 LINE L1 4644 4957 -920 5 1293 477 286 87 11 chrX 92858862 92859046 -73791250 - Lx7 LINE L1 -474 7222 7025 5 1293 3286 46 5 0 chrX 92859054 92859448 -73790848 + MTA_Mm LTR MaLR 1 396 0 5 1293 7573 68 70 4 chrX 92859448 92860478 -73789818 + MTA_Mm-int LTR MaLR 1 1098 0 5 1293 3265 33 8 15 chrX 92860478 92860877 -73789419 + MTA_Mm LTR MaLR 1 396 0 5 1293 415 265 373 31 chrX 92860882 92861145 -73789151 - Lx7 LINE L1 -913 6783 6431 5 1293 413 290 102 0 chrX 92861142 92861318 -73788978 + Lx7 LINE L1 7180 7373 -323 5 1293 270 0 0 0 chrX 92861323 92861353 -73788943 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 1293 4311 122 48 10 chrX 92861367 92861734 -73788562 + RMER6A LTR ERVK 1 385 -371 5 1293 204 111 0 0 chrX 92861734 92861770 -73788526 + (CAGAGA)n Simple_repeat Simple_repeat 2 37 0 5 1293 4311 122 48 10 chrX 92861770 92862128 -73788168 + RMER6A LTR ERVK 386 754 -2 5 1293 6518 113 2 4 chrX 92862192 92863237 -73787059 - L1_Mm LINE L1 -1007 4876 3834 5 1293 2630 48 6 0 chrX 92863238 92863592 -73786704 + MusHAL1 LINE L1 2355 2710 -2 5 1293 263 228 113 52 chrX 92863758 92863855 -73786441 - RMER30 DNA MER1_type 0 202 100 5 1293 466 268 11 2 chrX 92863855 92863962 -73786334 + B1_Mur4 SINE Alu 1 112 -37 5 1293 5669 87 14 1 chrX 92864400 92865175 -73785121 - L1_Mus3 LINE L1 -1 6637 5853 5 1293 225 0 0 0 chrX 92865612 92865637 -73784659 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1293 199 398 23 0 chrX 92865782 92865870 -73784426 - L2c LINE L2 -15 3411 3322 5 1293 1423 155 0 30 chrX 92866229 92866448 -73783848 - MTC LTR MaLR 0 421 206 5 1293 693 66 0 0 chrX 92866448 92866539 -73783757 + (TTTC)n Simple_repeat Simple_repeat 1 91 0 5 1293 1287 84 0 0 chrX 92866539 92866717 -73783579 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 5 1293 1423 155 0 30 chrX 92866717 92866729 -73783567 - MTC LTR MaLR -216 205 197 5 1293 249 128 0 0 chrX 92866731 92866778 -73783518 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 5 1293 2239 115 36 19 chrX 92866860 92867223 -73783073 - Lx3_Mus LINE L1 0 7009 6641 5 1293 968 182 72 5 chrX 92867225 92867418 -73782878 - MTC LTR MaLR -215 206 1 5 1293 302 354 53 26 chrX 92867418 92867569 -73782727 - MIR SINE MIR -95 167 13 5 1293 257 234 0 45 chrX 92867588 92867655 -73782641 - L2a LINE L2 -92 3334 3271 5 1293 2047 144 37 11 chrX 92867769 92868120 -73782176 - ORR1B2 LTR MaLR -7 360 1 5 1293 2580 107 19 14 chrX 92868120 92868530 -73781766 - ORR1B2-int LTR MaLR 0 1509 1098 5 1293 273 29 0 0 chrX 92868530 92868564 -73781732 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1293 2580 158 381 23 chrX 92868564 92868861 -73781435 - ORR1B2-int LTR MaLR -451 1129 915 5 1293 260 346 43 29 chrX 92869519 92869659 -73780637 - L2c LINE L2 -51 3336 3195 5 1293 1733 220 54 68 chrX 92869812 92870160 -73780136 - RLTR19-int LTR ERVK -3253 2884 2588 5 1293 2369 102 68 29 chrX 92870160 92870543 -73779753 + RMER10B LTR ERVL 1 398 0 5 1293 1733 214 55 61 chrX 92870543 92870680 -73779616 - RLTR19-int LTR ERVK -3550 2587 2449 5 1293 1374 54 54 5 chrX 92870680 92870866 -73779430 + B2_Mm2 SINE B2 1 195 0 5 1293 1733 214 55 61 chrX 92870866 92870972 -73779324 - RLTR19-int LTR ERVK -3689 2448 2346 5 1293 417 191 54 47 chrX 92870986 92871134 -73779162 - RLTR19-int LTR ERVK -3504 2018 1870 5 1293 4630 135 27 38 chrX 92871194 92871979 -73778317 - Lx LINE L1 -5 6649 5874 5 1293 382 261 73 63 chrX 92872167 92872617 -73777679 - MTC-int LTR MaLR -648 1315 466 5 1293 315 205 20 137 chrX 92872628 92872682 -73777614 - RLTR19-int LTR ERVK -4987 1150 1108 5 1293 796 180 5 87 chrX 92872682 92872889 -73777407 - B2_Mm2 SINE B2 -4 191 2 5 1293 315 205 20 137 chrX 92872889 92872987 -73777309 - RLTR19-int LTR ERVK -5030 1107 1016 5 1293 262 295 62 10 chrX 92873003 92873099 -73777197 - RLTR42-int LTR ERVK -3730 1792 1692 5 1293 1211 81 69 0 chrX 92873232 92873406 -73776890 - B2_Mm1t SINE B2 -6 187 2 5 1293 418 240 29 0 chrX 92873541 92873645 -73776651 - RLTR42-int LTR ERVK -4311 1211 1105 5 1293 993 209 50 21 chrX 92875064 92875303 -73774993 - MTC LTR MaLR 0 421 176 5 1293 606 268 101 6 chrX 92875303 92875649 -73774647 - L1MD LINE L1 -796 5350 4972 5 1293 1593 286 53 28 chrX 92875768 92876409 -73773887 + Lx9 LINE L1 6544 7200 -444 5 1293 23 33 0 0 chrX 92876517 92876547 -73773749 + AT_rich Low_complexity Low_complexity 1 30 0 5 1293 228 100 0 0 chrX 92876714 92876754 -73773542 + (TC)n Simple_repeat Simple_repeat 1 40 0 5 1293 507 251 156 16 chrX 92878419 92878727 -73771569 + L1MA4 LINE L1 5558 5908 -392 5 1293 342 0 0 0 chrX 92878727 92878765 -73771531 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1293 26 0 0 0 chrX 92878996 92879022 -73771274 + AT_rich Low_complexity Low_complexity 1 26 0 5 1293 874 331 58 88 chrX 92879554 92880087 -73770209 + MLT1F2 LTR MaLR 37 553 -7 5 1293 344 340 24 42 chrX 92880203 92880369 -73769927 + L3 LINE CR1 4283 4445 -44 5 1293 257 375 36 0 chrX 92880589 92880701 -73769595 + MER5A DNA MER1_type 1 116 -73 5 1293 2947 62 62 0 chrX 92880837 92881224 -73769072 + RLTR10A LTR ERVK 1 411 0 5 1293 565 181 60 0 chrX 92881740 92881856 -73768440 + ETnERV2-int LTR ERVK 7070 7192 -214 5 1293 559 163 285 35 chrX 92882791 92882963 -73767333 - B3 SINE B2 -1 215 1 5 1293 28711 44 0 6 chrX 92883472 92887905 -73762391 - L1Md_F2 LINE L1 0 6582 2176 5 1293 1075 155 5 13 chrX 92888258 92888467 -73761829 + Lx4B LINE L1 6553 6776 -233 5 1293 254 77 0 25 chrX 92888443 92888483 -73761813 - Lx4B LINE L1 -343 6715 6677 5 1293 195 69 0 0 chrX 92888522 92888551 -73761745 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1293 36297 30 0 0 chrX 92888638 92895041 -73755255 - L1Md_T LINE L1 0 6585 86 5 1293 4114 12 0 0 chrX 92895112 92895602 -73754694 + L1Md_A LINE L1 5097 5586 -297 5 1293 8386 36 0 0 chrX 92895602 92896598 -73753698 + L1Md_A LINE L1 5587 6582 0 5 1293 6008 169 45 49 chrX 92897169 92898533 -73751763 - Lx2B LINE L1 -4 6996 5638 5 1293 342 300 0 11 chrX 92898535 92898626 -73751670 - B1F SINE Alu -11 138 49 5 1293 441 0 0 0 chrX 92898640 92898689 -73751607 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1293 420 252 27 9 chrX 92898979 92899091 -73751205 + PB1D10 SINE Alu 2 115 -2 5 1293 1366 111 16 0 chrX 92899309 92899499 -73750797 + B2_Mm2 SINE B2 2 194 -1 5 1293 2843 44 15 0 chrX 92899688 92900029 -73750267 - ORR1A1 LTR MaLR 0 346 1 5 1293 5063 134 22 15 chrX 92900092 92900900 -73749396 + Lx2 LINE L1 6178 6991 -6 5 1293 2714 188 76 34 chrX 92901001 92901846 -73748450 - RLTR40 LTR ERVK -19 798 1 5 1293 4854 165 176 21 chrX 92901959 92903069 -73747227 + Lx2B LINE L1 5234 6561 -439 5 1293 207 0 0 0 chrX 92903069 92903092 -73747204 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 1293 2985 91 19 5 chrX 92903093 92903522 -73746774 - L1_Mus3 LINE L1 -7 6631 6197 5 1293 4854 196 120 19 chrX 92903522 92903930 -73746366 + Lx2B LINE L1 6562 6990 -10 5 1293 687 265 86 71 chrX 92904335 92904603 -73745693 + MER31B LTR ERV1 193 464 -2 5 1293 1224 248 112 37 chrX 92904767 92905115 -73745181 + ORR1D2 LTR MaLR 1 374 0 5 1293 398 322 174 42 chrX 92905858 92906334 -73743962 - Helitron1Nb_Mam RC Helitron -517 545 7 5 1293 340 256 88 52 chrX 92906505 92906641 -73743655 - MIRb SINE MIR -16 252 112 5 1293 27 62 0 0 chrX 92909648 92909696 -73740600 + AT_rich Low_complexity Low_complexity 1 48 0 5 1293 21 36 0 0 chrX 92910328 92910356 -73739940 + AT_rich Low_complexity Low_complexity 1 28 0 5 1293 184 122 0 47 chrX 92910807 92910850 -73739446 + CT-rich Low_complexity Low_complexity 3 43 0 5 1293 697 174 61 0 chrX 92910935 92911067 -73739229 - B1_Mus1 SINE Alu -8 140 1 5 1293 1937 218 30 8 chrX 92911113 92911515 -73738781 + MTD LTR MaLR 1 411 -8 5 1293 527 318 271 8 chrX 92911804 92912044 -73738252 + MER47B DNA MER2_type 116 418 0 5 1293 3787 58 0 12 chrX 92912455 92912946 -73737350 + L1Md_F2 LINE L1 6097 6581 -1 5 1293 660 124 9 28 chrX 92913918 92914026 -73736270 - B1_Mus2 SINE Alu -1 146 41 5 1293 1345 73 0 6 chrX 92914027 92914206 -73736090 - MTB LTR MaLR 0 400 223 5 1293 23 0 0 0 chrX 92914375 92914398 -73735898 + AT_rich Low_complexity Low_complexity 1 23 0 6 1293 229 145 13 80 chrX 92914581 92914656 -73735640 - Lx9 LINE L1 -1393 6251 6182 6 1293 1103 64 0 14 chrX 92914754 92914897 -73735399 + B1_Mus1 SINE Alu 1 141 -7 6 1293 207 0 0 0 chrX 92914900 92914923 -73735373 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 6 1293 310 279 288 0 chrX 92915034 92915145 -73735151 - ID_B1 SINE B4 -5 219 77 6 1293 272 313 126 19 chrX 92915494 92915709 -73734587 - MamRep434 DNA TcMar -173 253 16 6 1293 227 79 26 0 chrX 92915736 92915774 -73734522 + (TTAAA)n Simple_repeat Simple_repeat 1 39 0 6 1293 227 258 16 0 chrX 92916084 92916146 -73734150 - MER46C DNA MER2_type -12 326 264 6 1293 422 342 27 0 chrX 92916553 92916664 -73733632 + B1F SINE Alu 7 120 -29 6 1293 239 152 0 0 chrX 92916664 92916710 -73733586 + A-rich Low_complexity Low_complexity 131 176 0 6 1293 1142 55 0 7 chrX 92917119 92917265 -73733031 - B1_Mus2 SINE Alu -2 145 1 6 1293 564 107 0 0 chrX 92917278 92917353 -73732943 - tRNA-Ile-ATT tRNA tRNA -2 75 1 6 1293 846 199 134 5 chrX 92917584 92917771 -73732525 + B3 SINE B2 1 211 -5 6 1293 376 352 24 16 chrX 92917987 92918111 -73732185 + PB1 SINE Alu 1 125 -2 6 1293 598 170 217 0 chrX 92918307 92918491 -73731805 + Lx9 LINE L1 7421 7644 0 6 1293 225 94 0 0 chrX 92918879 92918911 -73731385 + (T)n Simple_repeat Simple_repeat 1 32 0 6 1293 493 231 21 69 chrX 92919059 92919203 -73731093 - Lx9 LINE L1 -410 7234 7098 6 1293 282 221 0 13 chrX 92919211 92919289 -73731007 + Lx9 LINE L1 7568 7644 0 6 1293 335 338 175 18 chrX 92919290 92919616 -73730680 - L1MD2 LINE L1 -62 6297 5921 6 1293 261 305 158 0 chrX 92919745 92919827 -73730469 + PB1D10 SINE Alu 15 109 -8 6 1293 331 232 51 43 chrX 92919830 92919947 -73730349 - L1M4b LINE L1 -3736 3598 3481 6 1293 249 241 159 6 chrX 92920435 92920598 -73729698 - L1M4c LINE L1 -762 5614 5427 6 1293 1191 61 0 0 chrX 92920599 92920746 -73729550 - B1_Mm SINE Alu 0 147 1 6 1293 743 164 39 0 chrX 92920797 92920925 -73729371 - B1_Mur4 SINE Alu -9 141 9 6 1293 2992 279 41 45 chrX 92920940 92921153 -73729143 - L1M4c LINE L1 -969 5407 5217 6 1293 1340 62 0 28 chrX 92921153 92921334 -73728962 + B2_Mm2 SINE B2 2 177 -18 6 1293 2992 279 41 45 chrX 92921334 92922616 -73727680 - L1M4c LINE L1 -1160 5216 3917 6 1293 440 273 66 10 chrX 92922626 92922822 -73727474 - L1M4c LINE L1 -2633 3743 3537 6 1293 342 0 0 0 chrX 92922833 92922871 -73727425 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1293 3026 54 2 10 chrX 92922871 92923265 -73727031 + MTA_Mm LTR MaLR 6 396 0 6 1293 333 0 0 0 chrX 92923268 92923305 -73726991 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1293 297 75 0 0 chrX 92923305 92923344 -73726952 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 1293 2029 209 116 9 chrX 92923346 92923896 -73726400 - Lx9 LINE L1 -7 7637 7029 6 1293 453 270 64 26 chrX 92923896 92923942 -73726354 - B4A SINE B4 -45 247 86 6 1293 872 55 0 0 chrX 92923942 92924052 -73726244 - B1_Mm SINE Alu -37 110 1 6 1293 446 226 0 109 chrX 92923950 92924069 -73726227 - MT2B LTR ERVL -344 257 152 6 1293 322 242 20 10 chrX 92924069 92924169 -73726127 - Lx9 LINE L1 -1243 6401 6301 6 1293 533 199 0 8 chrX 92924169 92924301 -73725995 + (TA)n Simple_repeat Simple_repeat 1 131 0 6 1293 1400 254 22 50 chrX 92924331 92924974 -73725322 - Lx9 LINE L1 -1560 6084 5420 6 1293 450 206 127 40 chrX 92925005 92925258 -73725038 - L1M4c LINE L1 -2999 3377 3103 6 1293 400 266 43 0 chrX 92925264 92925358 -73724938 + PB1D7 SINE Alu 23 120 0 6 1293 285 253 35 0 chrX 92925363 92925450 -73724846 - L1M4c LINE L1 -3260 3116 3027 6 1293 407 299 86 21 chrX 92925450 92925590 -73724706 + B1F SINE Alu 1 149 0 6 1293 486 259 49 58 chrX 92925623 92925828 -73724468 - L1M4c LINE L1 -3335 3041 2839 6 1293 614 273 147 18 chrX 92925828 92926468 -73723828 - L1M4c LINE L1 -3434 2942 2207 6 1293 481 125 0 22 chrX 92926691 92926781 -73723515 + (TA)n Simple_repeat Simple_repeat 1 88 0 6 1293 1292 69 0 0 chrX 92926784 92926944 -73723352 - B2_Mm2 SINE B2 -33 162 3 6 1293 237 254 0 0 chrX 92927187 92927254 -73723042 - L1M4c LINE L1 -4738 1646 1580 6 1293 1059 216 40 67 chrX 92927341 92927668 -73722628 - Lx6 LINE L1 0 7460 7143 6 1293 436 38 0 0 chrX 92927669 92927722 -73722574 - ORR1A3 LTR MaLR 0 326 274 6 1293 230 260 120 37 chrX 92928304 92928412 -73721884 - RMER12 LTR ERVK -60 1262 1146 6 1293 3490 53 6 0 chrX 92929132 92929603 -73720693 + L1_Mm LINE L1 3797 4270 -1613 6 161 6320 178 40 8 chrX 92929663 92931079 -73719217 - Lx3C LINE L1 -4 6972 5502 6 1294 2588 148 35 0 chrX 92931079 92931485 -73718811 + MTC LTR MaLR 2 421 0 6 1294 896 147 14 0 chrX 92931653 92931796 -73718500 - ORR1A2 LTR MaLR -89 238 94 6 1294 503 222 114 34 chrX 92931870 92932019 -73718277 - B3A SINE B2 0 198 38 6 1294 346 238 0 12 chrX 92932181 92932262 -73718034 + RMER21B LTR ERV1 114 193 -649 6 1294 1936 116 57 0 chrX 92932389 92932690 -73717606 - ORR1A3 LTR MaLR -8 318 1 6 1294 3516 211 59 18 chrX 92932700 92933534 -73716762 - Lx6 LINE L1 -803 6657 5790 6 1294 201 108 0 0 chrX 92933827 92933864 -73716432 + (T)n Simple_repeat Simple_repeat 1 37 0 6 1294 8397 117 27 15 chrX 92933893 92935269 -73715027 - Lx4A LINE L1 0 7058 5667 6 1294 326 121 15 0 chrX 92935400 92935466 -73714830 - Lx4A LINE L1 -2 7056 6990 6 1294 339 25 0 0 chrX 92935470 92935510 -73714786 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1294 242 56 28 0 chrX 92935510 92935546 -73714750 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 1294 2771 277 102 31 chrX 92935575 92935608 -73714688 + Lx9 LINE L1 6370 6401 -1243 6 1294 231 36 0 0 chrX 92935608 92935636 -73714660 + (CAA)n Simple_repeat Simple_repeat 3 30 0 6 1294 2771 277 102 31 chrX 92935636 92936788 -73713508 + Lx9 LINE L1 6402 7639 -5 6 1294 357 257 50 160 chrX 92937534 92938160 -73712136 - L1MDb LINE L1 -4988 1421 865 6 1294 2077 268 93 10 chrX 92938379 92939079 -73711217 - Lx7 LINE L1 -349 7347 6590 6 1294 34976 4 0 0 chrX 92939096 92944883 -73705413 + L1Md_A LINE L1 1 5586 -297 6 1294 9093 1 0 0 chrX 92944883 92945879 -73704417 + L1Md_A LINE L1 5587 6582 0 6 1294 27 0 0 0 chrX 92945879 92945906 -73704390 + AT_rich Low_complexity Low_complexity 1 27 0 6 1294 651 281 20 45 chrX 92945909 92946107 -73704189 - Lx7 LINE L1 -1119 6577 6385 6 1294 1659 21 0 0 chrX 92946123 92946310 -73703986 - B2_Mm1a SINE B2 -6 187 1 6 1294 432 0 0 0 chrX 92946638 92946686 -73703610 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1294 512 245 42 72 chrX 92946805 92946972 -73703324 + RSINE1 SINE B4 2 163 -2 6 1294 216 333 25 0 chrX 92947046 92947127 -73703169 - L2 LINE L2 -2512 907 825 6 1294 3897 159 84 35 chrX 92947182 92947299 -73702997 - Lx7 LINE L1 -700 6996 6885 6 1294 3205 36 15 5 chrX 92947299 92947691 -73702605 - MTA_Mm LTR MaLR 0 396 1 6 1294 3897 159 84 35 chrX 92947691 92948367 -73701929 - Lx7 LINE L1 -812 6884 6164 6 1294 236 221 59 0 chrX 92948380 92948448 -73701848 + Lx7 LINE L1 6069 6140 -1556 6 1294 962 284 39 110 chrX 92948452 92948816 -73701480 + MTE2a LTR MaLR 1 338 -41 6 1294 38510 15 4 6 chrX 92948827 92955187 -73695109 - L1Md_A LINE L1 0 6582 242 6 1294 467 313 68 36 chrX 92955755 92955974 -73694322 + MIR SINE MIR 6 231 -31 6 1294 951 268 18 11 chrX 92956099 92956371 -73693925 - Lx9 LINE L1 -205 7439 7166 6 1294 372 182 10 39 chrX 92956388 92956491 -73693805 + Lx9 LINE L1 7446 7545 -99 6 1294 4081 40 0 0 chrX 92956491 92956966 -73693330 - MT2C_Mm LTR ERVL 0 475 1 6 1294 302 0 0 0 chrX 92956966 92957004 -73693292 - MERVL-int LTR ERVL 0 5485 5448 6 1294 366 164 13 40 chrX 92957004 92957080 -73693216 - ORR1A3-int LTR MaLR -1323 640 567 6 1294 40767 52 11 12 chrX 92957201 92959695 -73690601 - MERVL-int LTR ERVL -129 5356 2867 6 1294 5841 34 15 1 chrX 92959695 92960410 -73689886 + L1Md_F3 LINE L1 5845 6569 -15 6 1294 40767 52 11 12 chrX 92960410 92963274 -73687022 - MERVL-int LTR ERVL -2619 2866 1 6 1294 4034 44 0 0 chrX 92963274 92963749 -73686547 - MT2C_Mm LTR ERVL 0 475 1 6 1294 240 183 23 68 chrX 92963749 92963837 -73686459 + Lx9 LINE L1 7541 7624 -20 6 1294 8449 31 0 0 chrX 92963847 92965554 -73684742 - L1Md_T LINE L1 -1 6581 4875 6 1294 1435 67 38 3 chrX 92965641 92965866 -73684430 + L1Md_F3 LINE L1 5349 5585 -298 6 1294 8535 24 2 1 chrX 92965867 92966863 -73683433 + L1Md_F3 LINE L1 5587 6583 -1 6 1294 14730 144 58 7 chrX 92966966 92970119 -73680177 - Lx4B LINE L1 -6 7052 3696 6 1294 279 0 0 0 chrX 92970119 92970150 -73680146 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1294 14730 118 55 4 chrX 92970150 92970566 -73679730 - Lx4B LINE L1 -2182 3695 3216 6 1294 569 318 45 37 chrX 92970679 92970921 -73679375 + MLT1D LTR MaLR 6 249 -256 6 1294 261 0 0 0 chrX 92971603 92971632 -73678664 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6 1294 214 301 0 40 chrX 92971779 92971800 -73678496 + G-rich Low_complexity Low_complexity 2 22 0 6 1294 3024 76 15 0 chrX 92971800 92972194 -73678102 + MTB LTR MaLR 1 400 0 6 1294 214 301 0 40 chrX 92972194 92972248 -73678048 + G-rich Low_complexity Low_complexity 23 73 0 6 1294 1436 215 98 21 chrX 92972743 92973104 -73677192 - MTD LTR MaLR -15 404 29 6 1294 207 88 0 0 chrX 92973105 92973139 -73677157 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 6 1294 1145 55 0 7 chrX 92973139 92973286 -73677010 - B1_Mus2 SINE Alu 0 147 2 6 1294 240 278 14 14 chrX 92973572 92973645 -73676651 + RLTR19C LTR ERVK 25 97 -409 6 1294 551 210 32 95 chrX 92973849 92974007 -73676289 + RLTR33 LTR ERVK 446 593 -85 6 1294 963 262 122 11 chrX 92974088 92974366 -73675930 + ORR1E LTR MaLR 45 353 -6 6 1294 784 122 14 7 chrX 92974372 92974513 -73675783 + (TTCC)n Simple_repeat Simple_repeat 1 142 0 6 1294 967 170 0 17 chrX 92974672 92974846 -73675450 + B2_Mm2 SINE B2 1 171 -24 6 1294 236 246 87 0 chrX 92975200 92975269 -73675027 - MIRm SINE MIR -120 156 82 6 1294 2898 141 14 26 chrX 92975517 92975675 -73674621 - Lx2 LINE L1 -6 6991 6833 6 1294 2626 116 36 83 chrX 92975675 92976181 -73674115 - RLTR45 LTR ERVK 0 482 1 6 1294 2898 141 14 26 chrX 92976181 92976525 -73673771 - Lx2 LINE L1 -165 6832 6495 6 1294 1148 270 209 20 chrX 92976640 92977180 -73673116 + Charlie1a DNA MER1_type 253 894 -561 6 1294 258 350 77 0 chrX 92977186 92977406 -73672890 + L1MCa LINE L1 20 256 -6252 6 1294 1098 211 106 87 chrX 92977451 92978064 -73672232 + L1MCa LINE L1 1112 1736 -4772 6 1294 662 266 79 3 chrX 92978080 92978370 -73671926 + L1_Mur3 LINE L1 934 1245 -6483 6 1294 1029 121 7 7 chrX 92978391 92978541 -73671755 + B1_Mur4 SINE Alu 1 150 0 6 1294 749 229 25 44 chrX 92978571 92978890 -73671406 + L1_Mur3 LINE L1 1237 1549 -4331 6 1294 331 129 14 0 chrX 92978904 92978974 -73671322 - Lx9 LINE L1 -1 7643 7573 6 1294 254 284 0 51 chrX 92978984 92979062 -73671234 + Lx7 LINE L1 6253 6326 -1370 6 1294 5195 238 70 19 chrX 92979054 92980787 -73669509 + Lx7 LINE L1 5477 7308 -388 6 1294 206 196 39 0 chrX 92980806 92980857 -73669439 + T-rich Low_complexity Low_complexity 2 54 0 7 1294 2616 167 63 19 chrX 92981035 92981814 -73668482 + Lx2B LINE L1 5677 6479 -175 7 1294 808 267 33 68 chrX 92982250 92982575 -73667721 + ORR1D1 LTR MaLR 6 303 -91 7 1294 258 316 101 17 chrX 92982925 92983044 -73667252 - L3 LINE CR1 -1561 2928 2800 7 1294 252 296 14 14 chrX 92983276 92983348 -73666948 - Charlie9 DNA MER1_type -8 2749 2678 7 1294 2681 108 5 2 chrX 92983497 92983915 -73666381 + L1_Mm LINE L1 4573 4991 -892 7 1294 545 65 0 0 chrX 92983914 92983991 -73666305 + L1_Mus3 LINE L1 5995 6071 -567 7 1294 900 131 12 18 chrX 92983975 92984146 -73666150 - L1_Mus2 LINE L1 -204 6362 6193 7 1294 8487 104 16 52 chrX 92984169 92985296 -73665000 - L1_Mm LINE L1 -1529 4354 3280 7 1294 951 68 114 0 chrX 92985296 92985428 -73664868 - B1_Mm SINE Alu 0 147 1 7 1294 8487 104 16 52 chrX 92985428 92985796 -73664500 - L1_Mm LINE L1 -2604 3279 2913 7 1294 284 0 0 27 chrX 92986328 92986365 -73663931 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 7 1294 4402 41 22 0 chrX 92986405 92986946 -73663350 - L1Md_F3 LINE L1 -1 6583 6031 7 1294 393 58 0 0 chrX 92986989 92987041 -73663255 + (TA)n Simple_repeat Simple_repeat 1 52 0 7 1294 2732 47 0 0 chrX 92987267 92987605 -73662691 + ORR1A1 LTR MaLR 1 338 -8 7 1294 13848 54 15 1 chrX 92987609 92989376 -73660920 + ORR1A1-int LTR MaLR 1 1792 0 7 1294 2847 55 0 0 chrX 92989376 92989722 -73660574 + ORR1A1 LTR MaLR 1 346 0 7 1294 263 252 175 26 chrX 92991006 92991120 -73659176 - L1MDa LINE L1 -5187 1446 1316 7 1294 433 307 96 5 chrX 92991123 92991254 -73659042 + B4A SINE B4 2 139 -153 7 1294 611 356 123 10 chrX 92991301 92991798 -73658498 - Lx7 LINE L1 -292 7181 6629 7 1294 1076 67 15 0 chrX 92992063 92992198 -73658098 + B1_Mus2 SINE Alu 1 137 -10 7 1294 225 65 0 0 chrX 92992198 92992229 -73658067 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 1294 736 278 44 19 chrX 92992231 92992550 -73657746 - Lx7 LINE L1 -1783 5913 5539 7 1294 254 374 128 14 chrX 92992601 92992742 -73657554 - ID_B1 SINE B4 -67 157 1 7 1294 272 267 65 32 chrX 92992744 92992849 -73657447 - L1MDa LINE L1 -6404 229 120 7 1294 2128 214 27 166 chrX 92992849 92993556 -73656740 + RMER19C LTR ERVK 3 611 0 7 1294 272 267 65 32 chrX 92993556 92993574 -73656722 - L1MDa LINE L1 -6514 119 102 7 1294 1423 68 0 20 chrX 92993585 92993781 -73656515 - L1_Mus1 LINE L1 0 6567 6376 7 1294 244 262 71 0 chrX 92993788 92993872 -73656424 - L1MDa LINE L1 -6501 132 43 7 1294 281 260 0 110 chrX 92993910 92993992 -73656304 - B3 SINE B2 -56 160 88 7 1294 6421 62 3 6 chrX 92994105 92994971 -73655325 + L1_Mus1 LINE L1 5704 6567 0 7 1294 24 0 0 0 chrX 92995954 92995978 -73654318 + AT_rich Low_complexity Low_complexity 1 24 0 7 1294 2449 52 0 0 chrX 92996013 92996318 -73653978 - L1Md_F2 LINE L1 -12 6570 6266 7 1294 969 332 80 39 chrX 92996319 92996813 -73653483 - RMER1C Other Other -518 824 342 7 1294 315 0 0 0 chrX 92996813 92996848 -73653448 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 1294 969 331 82 40 chrX 92996848 92997160 -73653136 - RMER1C Other Other -1001 341 10 7 1294 578 220 8 0 chrX 92997266 92997384 -73652912 - RMER1B Other Other -355 711 593 7 1294 29 47 0 0 chrX 92997882 92997925 -73652371 + AT_rich Low_complexity Low_complexity 1 43 0 7 1294 320 280 23 47 chrX 92997963 92998049 -73652247 - RSINE1 SINE B4 -6 159 76 7 1294 1374 80 0 5 chrX 92998461 92998649 -73651647 - B2_Mm2 SINE B2 -8 187 1 7 1294 376 292 31 10 chrX 92998721 92998818 -73651478 - PB1D7 SINE Alu -4 116 18 7 1294 381 129 0 0 chrX 92998848 92998918 -73651378 + (TA)n Simple_repeat Simple_repeat 2 71 0 7 1294 267 31 0 0 chrX 92999550 92999582 -73650714 + (TTG)n Simple_repeat Simple_repeat 2 33 0 7 1294 3023 53 5 0 chrX 92999606 93000000 -73650296 - L1_Mus2 LINE L1 -1 6565 6170 7 1294 9089 77 4 3 chrX 93000000 93001605 -73648691 - L1_Mus2 LINE L1 -397 6169 4561 1 1294 21 82 0 0 chrX 93001673 93001722 -73648574 + AT_rich Low_complexity Low_complexity 1 49 0 2 1294 2702 189 21 88 chrX 93001821 93002833 -73647463 + L1VL4 LINE L1 165 1096 -2463 3 1294 1010 306 55 32 chrX 93002829 93003265 -73647031 - Lx7 LINE L1 -706 6990 6545 4 1294 589 286 85 12 chrX 93003298 93003627 -73646669 - L1_Rod LINE L1 -3049 2798 2446 5 1294 1053 281 42 11 chrX 93003626 93004100 -73646196 - L1_Rod LINE L1 -3892 1955 1467 5 1294 7926 150 27 11 chrX 93004339 93006017 -73644279 - Lx2 LINE L1 0 6997 5290 6 1294 2348 66 6 9 chrX 93006017 93006339 -73643957 - L1_Mus3 LINE L1 -5 6633 6313 7 1294 3823 157 27 16 chrX 93006339 93006511 -73643785 - Lx2 LINE L1 -588 5289 5124 6 1294 4105 127 31 6 chrX 93006523 93007189 -73643107 - Lx2 LINE L1 -2 6995 6313 8 1294 1207 134 37 0 chrX 93007190 93007406 -73642890 - Lx2 LINE L1 -845 6152 5929 8 1294 7272 93 9 13 chrX 93007406 93008609 -73641687 - MusHAL1 LINE L1 -1498 1214 17 9 1294 1915 225 62 94 chrX 93008597 93008738 -73641558 - L1Md_F LINE L1 -5417 1102 979 1 1294 2146 62 52 3 chrX 93008738 93009028 -73641268 - L1_Mus1 LINE L1 0 6567 6264 1 1294 1915 225 62 94 chrX 93009028 93009726 -73640570 - L1Md_F LINE L1 -5541 978 290 1 1294 310 266 32 0 chrX 93009790 93009914 -73640382 - L1MA4 LINE L1 -371 5929 5802 1 1294 273 311 64 28 chrX 93009910 93010019 -73640277 + Lx7 LINE L1 6661 6773 -923 1 1294 1075 89 65 6 chrX 93010019 93010188 -73640108 + Lx3_Mus LINE L1 6814 6992 -17 1 1294 1607 283 104 108 chrX 93010288 93011157 -73639139 - Lx5 LINE L1 -75 6975 6087 1 1294 1029 320 44 18 chrX 93011201 93011704 -73638592 + Lx8 LINE L1 6805 7320 -153 1 1294 489 311 78 25 chrX 93012101 93012305 -73637991 - MIRb SINE MIR -1 267 53 1 1294 29096 78 2 15 chrX 93012611 93017597 -73632699 - L1Md_F2 LINE L1 -10 6572 1656 1 1294 4385 12 0 24 chrX 93017597 93018102 -73632194 + MT2_Mm LTR ERVL 1 493 0 1 1294 38541 18 14 0 chrX 93018102 93023385 -73626911 + MERVL-int LTR ERVL 1 5355 -130 1 1294 353 157 58 46 chrX 93023389 93023476 -73626820 + ORR1A3-int LTR MaLR 553 640 -1323 2 1294 302 0 0 0 chrX 93023476 93023514 -73626782 + MERVL-int LTR ERVL 5448 5485 0 1 1294 4385 12 0 24 chrX 93023514 93024019 -73626277 + MT2_Mm LTR ERVL 1 493 0 1 1294 5837 92 24 9 chrX 93024019 93025289 -73625007 - L1Md_F2 LINE L1 -4223 1660 363 1 1294 792 248 29 10 chrX 93025395 93025603 -73624693 - B3 SINE B2 -3 213 2 2 1294 1078 302 150 34 chrX 93025770 93026296 -73624000 + Tigger7 DNA MER2_type 4 591 -1900 2 1294 228 417 0 0 chrX 93026287 93026359 -73623937 + Tigger7 DNA MER2_type 2414 2485 -6 2 1294 1191 48 7 0 chrX 93026413 93026559 -73623737 + B1_Mus2 SINE Alu 1 147 0 2 1294 844 257 79 78 chrX 93026656 93026866 -73623430 - Lx9 LINE L1 -1613 6083 5865 2 1294 282 29 0 0 chrX 93026866 93026901 -73623395 + (TTGG)n Simple_repeat Simple_repeat 2 36 0 2 1294 1008 176 17 60 chrX 93026901 93026980 -73623316 - Lx9 LINE L1 -17 5830 5751 2 1294 3169 39 13 0 chrX 93026980 93027367 -73622929 - L1Md_F2 LINE L1 -2 6580 6189 2 1294 1008 176 17 60 chrX 93027367 93027522 -73622774 - Lx9 LINE L1 -97 5750 5606 2 1294 7300 72 5 0 chrX 93027529 93028866 -73621430 + L1_Mus1 LINE L1 5223 6567 0 2 1294 1022 242 40 137 chrX 93028866 93029188 -73621108 - Lx9 LINE L1 -244 5603 5327 2 1294 1154 75 0 0 chrX 93029188 93029335 -73620961 - B1_Mus2 SINE Alu 0 147 1 2 1294 1022 242 40 137 chrX 93029335 93029509 -73620787 - Lx9 LINE L1 -521 5326 5155 2 1294 1394 313 131 25 chrX 93029507 93030216 -73620080 + Lx9 LINE L1 6410 7193 -451 2 1294 218 106 21 0 chrX 93030300 93030347 -73619949 + (CAAAAA)n Simple_repeat Simple_repeat 2 49 0 3 1294 5249 73 9 7 chrX 93030379 93031183 -73619113 - L1_Mus2 LINE L1 -165 6401 5625 3 1294 321 26 0 0 chrX 93031195 93031233 -73619063 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1294 667 278 19 5 chrX 93032053 93032266 -73618030 + Lx6 LINE L1 7105 7320 -140 3 1294 495 138 43 0 chrX 93032497 93032591 -73617705 + Lx6 LINE L1 7358 7455 -5 3 1294 22 0 0 0 chrX 93032592 93032614 -73617682 + AT_rich Low_complexity Low_complexity 1 22 0 3 1294 4563 78 0 7 chrX 93032638 93033498 -73616798 + L1_Mus1 LINE L1 5225 6083 -484 3 1294 3149 58 5 5 chrX 93033498 93033894 -73616402 - MTA_Mm LTR MaLR 0 396 1 3 1294 4266 69 0 10 chrX 93033894 93033984 -73616312 + L1_Mus1 LINE L1 6084 6168 -399 3 1294 2447 10 0 0 chrX 93033984 93034274 -73616022 - L1Md_T LINE L1 0 6582 6293 3 1294 3380 58 0 0 chrX 93034274 93034689 -73615607 + L1_Mus1 LINE L1 6153 6567 0 3 1294 9336 74 1 33 chrX 93034763 93036074 -73614222 - Lx3_Mus LINE L1 0 7009 5740 3 1294 501 202 169 8 chrX 93036074 93036194 -73614102 - RMER19B LTR ERVK -234 668 527 3 1294 403 133 0 0 chrX 93036192 93036252 -73614044 + RMER19B LTR ERVK 470 529 -373 4 1294 471 366 55 12 chrX 93036275 93036618 -73613678 + Lx7 LINE L1 6955 7312 -384 4 1294 23 0 0 0 chrX 93036709 93036732 -73613564 + AT_rich Low_complexity Low_complexity 1 23 0 4 1294 3595 184 117 36 chrX 93036746 93037695 -73612601 - Lx9 LINE L1 -10 7634 6609 4 1294 477 45 21 73 chrX 93037695 93037791 -73612505 + L1Md_F2 LINE L1 6492 6582 0 4 1294 503 231 10 97 chrX 93037804 93038012 -73612284 + L1_Mur1 LINE L1 3454 3642 -2244 4 1294 245 262 83 0 chrX 93038007 93038091 -73612205 + Lx8 LINE L1 7127 7217 -256 4 1294 328 55 0 35 chrX 93038097 93038154 -73612142 + (TTTTG)n Simple_repeat Simple_repeat 3 57 0 4 1294 426 291 92 13 chrX 93038155 93038308 -73611988 + Lx8 LINE L1 7232 7396 -77 4 1294 378 231 10 0 chrX 93038385 93038489 -73611807 + L1_Mur3 LINE L1 3650 3754 -2126 4 1294 718 265 12 82 chrX 93038500 93038876 -73611420 - L1_Rod LINE L1 -115 5732 5428 4 1294 427 54 360 0 chrX 93038881 93038977 -73611319 + MTB LTR MaLR 207 340 -67 5 1294 414 333 15 0 chrX 93038965 93039100 -73611196 - B3 SINE B2 -77 139 3 5 1294 180 0 0 0 chrX 93040451 93040471 -73609825 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 5 1294 432 126 0 0 chrX 93040471 93040558 -73609738 + Lx5 LINE L1 1176 1262 -5824 5 1294 2586 163 87 7 chrX 93040552 93041139 -73609157 + Lx5 LINE L1 2639 3272 -2605 5 1294 8255 158 56 11 chrX 93041153 93043844 -73606452 + Lx5 LINE L1 4231 7039 -11 5 1294 213 213 0 0 chrX 93043846 93043893 -73606403 + (TATATG)n Simple_repeat Simple_repeat 3 49 0 5 1294 429 151 14 0 chrX 93043893 93043966 -73606330 - L1_Mus1 LINE L1 -92 6475 6402 5 1294 354 47 0 0 chrX 93043965 93044008 -73606288 + L1Md_F2 LINE L1 5977 6019 -563 5 1294 2458 102 0 0 chrX 93044009 93044353 -73605943 + L1Md_F LINE L1 295 638 -5881 5 1294 336 143 0 0 chrX 93044673 93044729 -73605567 + (GGGA)n Simple_repeat Simple_repeat 1 56 0 5 1294 532 151 42 8 chrX 93045015 93045135 -73605161 + Lx LINE L1 6531 6654 0 5 1294 279 51 0 0 chrX 93045779 93045818 -73604478 - RLTR1B LTR ERV1 -473 39 1 6 1294 24139 49 28 36 chrX 93045818 93047918 -73602378 - RLTR1B-int LTR ERV1 0 3299 1139 6 1294 477 0 0 0 chrX 93047918 93047971 -73602325 + (TC)n Simple_repeat Simple_repeat 1 53 0 6 1294 24139 49 28 36 chrX 93047971 93049198 -73601098 - RLTR1B-int LTR ERV1 -2161 1138 1 6 1294 990 133 30 0 chrX 93049198 93049363 -73600933 - RLTR1B LTR ERV1 0 512 343 6 1294 404 123 0 0 chrX 93049367 93049424 -73600872 - RLTR1B LTR ERV1 -102 410 354 6 1294 2150 198 178 23 chrX 93049424 93049992 -73600304 + Lx9 LINE L1 6328 6983 -661 6 1294 1370 262 23 10 chrX 93050011 93050396 -73599900 + Lx9 LINE L1 7075 7464 -180 6 1294 445 188 9 0 chrX 93050417 93050529 -73599767 + Lx9 LINE L1 7526 7638 -6 6 1294 2356 121 144 5 chrX 93050781 93051204 -73599092 - RLTR45 LTR ERVK 0 482 1 6 1294 439 334 72 54 chrX 93051363 93051736 -73598560 + Lx8 LINE L1 7087 7466 -7 6 1294 794 294 30 42 chrX 93052567 93053210 -73597086 + L1_Rod LINE L1 1161 1802 -4045 6 1294 1068 221 159 4 chrX 93053214 93053459 -73596837 - MTD LTR MaLR -1 418 136 6 1294 4564 34 1 0 chrX 93053459 93054244 -73596052 + L1Md_F3 LINE L1 5298 6083 -501 6 1294 4376 78 0 0 chrX 93054238 93054973 -73595323 - L1Md_F LINE L1 -4041 1842 1108 6 1294 4524 77 69 0 chrX 93054941 93055595 -73594701 - L1Md_F LINE L1 -5411 1205 507 6 1294 346 297 80 13 chrX 93055595 93055619 -73594677 - MTD LTR MaLR -245 174 148 6 1294 3974 60 2 2 chrX 93055619 93056122 -73594174 + L1Md_F3 LINE L1 6067 6569 -15 7 1294 346 297 80 13 chrX 93056122 93056247 -73594049 - MTD LTR MaLR -272 147 15 6 1294 861 211 207 19 chrX 93056265 93056536 -73593760 - MTD-int LTR MaLR -2 1256 935 6 1294 251 267 73 23 chrX 93056536 93056742 -73593554 + L1_Rod LINE L1 3358 3594 -2549 6 1294 4224 279 78 53 chrX 93056749 93058259 -73592037 + L1_Mur3 LINE L1 3730 5285 -595 7 1294 6033 32 4 0 chrX 93058259 93058974 -73591322 + L1Md_A LINE L1 5865 6582 0 7 1294 4224 279 78 53 chrX 93058974 93059517 -73590779 + L1_Mur3 LINE L1 5286 5836 -44 7 1294 272 327 106 0 chrX 93059555 93059659 -73590637 + Lx8 LINE L1 6850 6964 -509 7 1294 4962 256 94 103 chrX 93059667 93060972 -73589324 + L1_Rod LINE L1 1258 2658 -3189 7 1294 189 0 0 0 chrX 93060972 93060993 -73589303 + (TA)n Simple_repeat Simple_repeat 1 21 0 7 161 4962 256 94 103 chrX 93060993 93061300 -73588996 + L1_Rod LINE L1 2659 2995 -2852 7 1295 1542 32 38 0 chrX 93061300 93061485 -73588811 + B2_Mm1t SINE B2 2 193 0 7 1295 4962 256 94 103 chrX 93061485 93061631 -73588665 + L1_Rod LINE L1 2996 3122 -2721 7 1295 859 200 0 42 chrX 93061631 93061798 -73588498 + ORR1D1 LTR MaLR 1 160 -214 7 1295 703 32 21 0 chrX 93061802 93061896 -73588400 + (TC)n Simple_repeat Simple_repeat 2 97 0 7 1295 4962 256 94 103 chrX 93061896 93062832 -73587464 + L1_Rod LINE L1 3127 4059 -1788 7 1295 7341 119 24 39 chrX 93062832 93062859 -73587437 - Lx2 LINE L1 -1 6996 6975 7 1295 3101 37 50 0 chrX 93062859 93063236 -73587060 + MTA_Mm LTR MaLR 1 396 0 8 1295 7341 119 24 39 chrX 93063236 93064431 -73585865 - Lx2 LINE L1 -23 6974 5793 7 1295 4962 256 94 103 chrX 93064431 93064760 -73585536 + L1_Rod LINE L1 4060 4424 -1423 7 1295 359 41 20 0 chrX 93064856 93064905 -73585391 + (TA)n Simple_repeat Simple_repeat 2 51 0 8 1295 433 258 10 0 chrX 93064908 93065005 -73585291 - MT2A LTR ERVL -83 450 353 8 1295 489 34 0 0 chrX 93065101 93065160 -73585136 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 8 1295 531 244 114 0 chrX 93065160 93065283 -73585013 - B1_Mur2 SINE Alu -11 138 2 8 1295 787 208 0 13 chrX 93065308 93065464 -73584832 - B2_Mm2 SINE B2 -15 180 27 8 1295 1107 72 0 0 chrX 93065486 93065624 -73584672 - B1_Mm SINE Alu -9 138 1 8 1295 213 154 0 0 chrX 93065624 93065663 -73584633 - B3 SINE B2 -176 40 2 8 1295 38401 6 0 0 chrX 93065789 93071369 -73578927 + L1Md_A LINE L1 7 5586 -297 8 1295 9017 2 0 0 chrX 93071369 93072364 -73577932 + L1Md_A LINE L1 5587 6581 -1 8 1295 645 303 9 50 chrX 93072663 93072885 -73577411 - B3 SINE B2 -3 213 1 8 1295 22 35 0 0 chrX 93072974 93073003 -73577293 + AT_rich Low_complexity Low_complexity 1 29 0 9 1295 567 0 0 0 chrX 93074121 93074184 -73576112 + (GTTTG)n Simple_repeat Simple_repeat 2 64 0 9 1295 3437 43 5 0 chrX 93074974 93075392 -73574904 - L1Md_F2 LINE L1 -12 6570 6151 9 1295 235 65 0 0 chrX 93076468 93076499 -73573797 - U2 snRNA snRNA -154 34 4 9 1295 69 68 0 0 chrX 93077126 93077258 -73573038 + AT_rich Low_complexity Low_complexity 1 132 0 9 1295 324 282 24 29 chrX 93077603 93077749 -73572547 + L1M3c LINE L1 1617 1792 -4977 9 1295 201 39 0 0 chrX 93077802 93077828 -73572468 + (A)n Simple_repeat Simple_repeat 1 26 0 9 1295 248 163 23 0 chrX 93077832 93077875 -73572421 + PB1D7 SINE Alu 68 111 -9 9 1295 1406 199 19 16 chrX 93078507 93078828 -73571468 - Lx4B LINE L1 0 7058 6737 9 1295 392 384 47 0 chrX 93079583 93079755 -73570541 + B3A SINE B2 2 181 -17 9 1295 987 61 0 165 chrX 93080099 93080275 -73570021 - B1_Mus1 SINE Alu 0 148 2 1 1295 454 257 101 43 chrX 93080388 93080673 -73569623 + L1M3c LINE L1 2012 2259 -4520 9 1295 361 224 32 0 chrX 93080678 93080803 -73569493 - Lx9 LINE L1 0 7644 7516 1 1295 387 296 86 4 chrX 93080830 93081074 -73569222 + L1M3c LINE L1 2310 2573 -4276 9 1295 874 312 49 6 chrX 93081556 93082066 -73568230 + L1M3c LINE L1 2835 3366 -3476 9 1295 467 163 0 44 chrX 93082127 93082217 -73568079 + RMER1B Other Other 45 130 -936 1 1295 2380 201 70 72 chrX 93082214 93082650 -73567646 + RMER1B Other Other 434 868 -198 1 1295 2769 107 60 0 chrX 93082650 93083081 -73567215 + L1_Mus3 LINE L1 6176 6632 -6 1 1295 2380 201 70 72 chrX 93083081 93083254 -73567042 + RMER1B Other Other 869 1042 -24 1 1295 373 274 115 29 chrX 93083286 93083530 -73566766 + L1M3c LINE L1 3396 3660 -3182 9 1295 959 56 64 0 chrX 93083559 93083684 -73566612 - B1_Mus2 SINE Alu -14 133 1 1 1295 1375 310 67 28 chrX 93083690 93084683 -73565613 - L1MA4 LINE L1 -413 5887 4812 1 1295 257 265 29 14 chrX 93084967 93085036 -73565260 + ID4 SINE ID 4 73 -10 1 1295 223 291 12 12 chrX 93085041 93085121 -73565175 + GA-rich Low_complexity Low_complexity 3 82 0 1 1295 327 301 76 16 chrX 93085588 93085752 -73564544 + MIRc SINE MIR 88 252 -16 1 1295 2169 174 51 14 chrX 93085874 93086289 -73564007 - Lx9 LINE L1 -420 7224 6795 1 1295 192 152 0 0 chrX 93086289 93086322 -73563974 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 1 1295 966 108 6 18 chrX 93086374 93086544 -73563752 + (TTTC)n Simple_repeat Simple_repeat 2 169 0 1 1295 227 297 45 115 chrX 93086982 93087138 -73563158 - RLTR10C LTR ERVK -253 183 39 1 1295 257 207 50 33 chrX 93087005 93087065 -73563231 + RMER12B LTR ERVK 743 803 -601 1 1295 380 281 70 28 chrX 93087054 93087248 -73563048 + RMER12 LTR ERVK 868 1008 -396 1 1295 1197 34 0 0 chrX 93087361 93087507 -73562789 + (TG)n Simple_repeat Simple_repeat 2 147 0 1 1295 582 178 325 16 chrX 93087507 93087691 -73562605 + RMER12 LTR ERVK 973 1217 -105 1 1295 1340 243 75 22 chrX 93088093 93088451 -73561845 + MTE2a LTR MaLR 1 377 -2 1 1295 570 280 0 23 chrX 93089239 93089367 -73560929 - ID_B1 SINE B4 -36 188 64 1 1295 474 65 0 0 chrX 93089410 93089472 -73560824 + (TATATG)n Simple_repeat Simple_repeat 4 65 0 1 1295 206 62 31 0 chrX 93089826 93089858 -73560438 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 1 1295 9244 96 19 7 chrX 93089858 93091495 -73558801 - Lx3A LINE L1 -15 6966 5307 1 1295 24 0 0 0 chrX 93091899 93091923 -73558373 + AT_rich Low_complexity Low_complexity 1 24 0 1 1295 233 297 91 35 chrX 93092092 93092235 -73558061 - Lx9 LINE L1 -1675 5969 5819 1 1295 518 303 162 12 chrX 93092227 93092468 -73557828 - Lx8 LINE L1 -1023 6450 6174 1 1295 26 50 0 0 chrX 93092976 93093016 -73557280 + AT_rich Low_complexity Low_complexity 1 40 0 1 1295 645 133 23 23 chrX 93093035 93093166 -73557130 - Lx3B LINE L1 -3 6970 6840 1 1295 487 304 9 18 chrX 93093171 93093285 -73557011 + PB1D7 SINE Alu 4 116 -4 1 1295 315 314 17 8 chrX 93093321 93093440 -73556856 - MIRb SINE MIR -18 250 131 1 1295 291 281 47 55 chrX 93093587 93093715 -73556581 - PB1 SINE Alu 0 127 1 1 1295 469 318 34 7 chrX 93095605 93095754 -73554542 + MLT1D LTR MaLR 3 155 -350 1 1295 390 232 296 0 chrX 93095884 93096009 -73554287 + MLT1D LTR MaLR 342 503 -2 1 1295 518 271 105 0 chrX 93096018 93096223 -73554073 + L1M3 LINE L1 5538 5772 -396 1 1295 1446 277 60 0 chrX 93096583 93096930 -73553366 - MTEb LTR MaLR -2 377 10 1 1295 3551 266 118 38 chrX 93096939 93097961 -73552335 - MTEb-int LTR MaLR 0 1580 455 1 1295 872 247 0 10 chrX 93097961 93098153 -73552143 - B3A SINE B2 -6 192 3 1 1295 3551 266 118 38 chrX 93098153 93098287 -73552009 - MTEb-int LTR MaLR -1126 454 331 1 1295 233 185 0 69 chrX 93098369 93098427 -73551869 + T-rich Low_complexity Low_complexity 5 58 0 1 1295 3048 75 2 5 chrX 93099248 93099652 -73550644 + L1_Mus2 LINE L1 6164 6566 0 1 1295 436 298 0 0 chrX 93099654 93099758 -73550538 + B3A SINE B2 17 120 -78 1 1295 815 255 88 0 chrX 93099805 93099997 -73550299 + B3 SINE B2 1 209 -7 1 1295 240 200 20 0 chrX 93100033 93100083 -73550213 + L1M3c LINE L1 1574 1624 -4517 1 1295 325 351 0 0 chrX 93100086 93100163 -73550133 + RSINE1 SINE B4 71 147 -18 1 1295 351 0 0 0 chrX 93100180 93100219 -73550077 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1295 444 37 0 0 chrX 93100219 93100272 -73550024 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 1295 946 319 70 28 chrX 93100276 93100991 -73549305 + L1M3c LINE L1 2228 2972 -3235 1 1295 2950 264 118 25 chrX 93101236 93102108 -73548188 + Lx9 LINE L1 6499 7433 -211 1 1295 384 22 0 0 chrX 93102108 93102153 -73548143 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1295 2950 264 118 25 chrX 93102153 93102286 -73548010 + Lx9 LINE L1 7434 7598 -46 1 1295 441 236 72 46 chrX 93102376 93102651 -73547645 + L1_Mur3 LINE L1 3145 3434 -2413 1 1295 483 116 0 0 chrX 93103073 93103142 -73547154 + ORR1C2 LTR MaLR 3 71 -313 1 1295 1525 161 7 57 chrX 93103143 93103440 -73546856 - Lx3C LINE L1 -396 6580 6299 1 1295 3657 153 35 1 chrX 93103440 93104163 -73546133 + Lx4B LINE L1 5526 6283 -775 1 1295 5185 187 37 26 chrX 93104159 93105357 -73544939 + L1_Mur3 LINE L1 2921 4131 -1749 1 1295 915 101 7 0 chrX 93105425 93105564 -73544732 + L1_Mur3 LINE L1 4395 4534 -1346 1 1295 606 241 133 0 chrX 93105567 93105762 -73544534 + L1_Mur3 LINE L1 5057 5277 -603 1 1295 207 65 21 42 chrX 93105883 93105931 -73544365 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 1 1295 972 231 5 5 chrX 93106017 93106235 -73544061 - Lx6 LINE L1 -6 7454 7237 1 1295 4766 43 10 0 chrX 93106232 93106818 -73543478 + L1Md_F3 LINE L1 5993 6584 0 1 1295 1761 213 6 0 chrX 93106820 93107135 -73543161 - Lx6 LINE L1 -217 7243 6927 1 1295 2298 95 3 47 chrX 93107135 93107193 -73543103 - ORR1A2 LTR MaLR 0 327 273 1 1295 802 106 0 60 chrX 93107193 93107344 -73542952 - L1Md_F3 LINE L1 0 6584 6443 1 1295 2298 95 3 47 chrX 93107344 93107627 -73542669 - ORR1A2 LTR MaLR -55 272 1 1 1295 5897 209 37 11 chrX 93107648 93109147 -73541149 - Lx6 LINE L1 -567 6893 5354 1 1295 228 67 0 0 chrX 93109147 93109177 -73541119 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 1295 748 271 22 13 chrX 93109177 93109416 -73540880 - Lx2B LINE L1 -56 6917 6675 1 1295 490 143 60 0 chrX 93109417 93109565 -73540731 - Lx6 LINE L1 -5813 1273 1108 1 1295 38 39 0 0 chrX 93109565 93109617 -73540679 + AT_rich Low_complexity Low_complexity 1 52 0 1 1295 374 221 199 66 chrX 93109836 93109901 -73540395 - RLTR20A2 LTR ERVK -8 570 496 1 1295 402 100 0 0 chrX 93109901 93109961 -73540335 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 1295 374 221 199 66 chrX 93109961 93110031 -73540265 - RLTR20A2 LTR ERVK -83 495 417 1 1295 549 279 29 0 chrX 93110071 93110207 -73540089 - MTC LTR MaLR -229 192 53 1 1295 14356 81 0 2 chrX 93110211 93112316 -73537980 - L1_Mus1 LINE L1 -35 6532 4431 1 1295 3519 76 72 22 chrX 93112316 93112813 -73537483 - L1Md_F2 LINE L1 0 6582 6061 1 1295 14356 95 1 4 chrX 93112813 93113327 -73536969 - L1_Mus1 LINE L1 -1453 4430 3919 1 1295 488 227 65 43 chrX 93113333 93113374 -73536922 - L1_Mur3 LINE L1 -6527 1185 1144 1 1295 4288 101 16 6 chrX 93113374 93114002 -73536294 - Lx LINE L1 0 6654 6021 1 1295 488 227 65 43 chrX 93114002 93114144 -73536152 - L1_Mur3 LINE L1 -6569 1143 999 1 1295 3038 153 12 23 chrX 93114151 93114712 -73535584 - Lx4B LINE L1 -1 7057 6503 1 1295 423 165 78 0 chrX 93114712 93114815 -73535481 - Lx4B LINE L1 -894 6164 6054 1 1295 229 111 65 22 chrX 93114834 93114880 -73535416 + MTD LTR MaLR 368 415 -4 1 1295 1563 233 51 10 chrX 93114885 93114996 -73535300 + MTD LTR MaLR 1 112 -307 1 1295 780 127 0 40 chrX 93114996 93115144 -73535152 - L1Md_F2 LINE L1 0 6582 6441 1 1295 1563 233 51 10 chrX 93115144 93115426 -73534870 + MTD LTR MaLR 113 410 -9 1 1295 714 300 110 15 chrX 93115436 93115917 -73534379 + L1_Mur3 LINE L1 2549 3075 -2805 1 1295 1678 247 33 0 chrX 93115982 93116368 -73533928 + Lx5 LINE L1 6470 6894 -566 1 1295 536 269 7 28 chrX 93116374 93116519 -73533777 - RMER1B Other Other -913 153 12 1 1295 465 90 22 11 chrX 93116546 93116636 -73533660 + (TA)n Simple_repeat Simple_repeat 1 91 0 1 1295 839 79 0 52 chrX 93116636 93116770 -73533526 - B2_Mm2 SINE B2 -68 127 1 1 1295 228 241 0 0 chrX 93117344 93117402 -73532894 + (TATATG)n Simple_repeat Simple_repeat 6 63 0 1 1295 501 242 24 0 chrX 93117445 93117569 -73532727 + B1_Mur4 SINE Alu 24 150 0 1 1295 29 0 0 0 chrX 93117832 93117861 -73532435 + AT_rich Low_complexity Low_complexity 1 29 0 1 1295 409 217 33 0 chrX 93118077 93118169 -73532127 + B1F1 SINE Alu 15 109 -40 1 1295 548 53 0 0 chrX 93118444 93118520 -73531776 - B1_Mus2 SINE Alu -1 146 71 1 1295 654 203 17 0 chrX 93118963 93119081 -73531215 + RSINE1 SINE B4 5 124 -41 1 1295 738 32 0 0 chrX 93119084 93119177 -73531119 + (CA)n Simple_repeat Simple_repeat 1 93 0 1 1295 268 205 35 82 chrX 93119230 93119315 -73530981 + ID4_ SINE ID 3 83 0 1 1295 257 330 18 9 chrX 93119368 93119478 -73530818 + PB1D10 SINE Alu 1 111 -6 1 1295 191 330 42 11 chrX 93119556 93119651 -73530645 - MIRc SINE MIR -108 160 63 1 1295 260 0 0 54 chrX 93121329 93121366 -73528930 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1 1295 444 311 91 5 chrX 93121373 93121570 -73528726 - MIRc SINE MIR -52 216 3 1 1295 715 182 88 0 chrX 93123663 93123800 -73526496 - B1_Mur2 SINE Alu 0 149 1 1 1295 1256 34 0 0 chrX 93123931 93124077 -73526219 - B1_Mus1 SINE Alu -2 146 1 1 1295 203 171 0 0 chrX 93125054 93125095 -73525201 + T-rich Low_complexity Low_complexity 1 41 0 1 1295 380 284 0 0 chrX 93128024 93128105 -73522191 - ID4 SINE ID -1 82 2 1 1295 192 158 0 0 chrX 93128334 93128372 -73521924 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 1295 270 286 0 0 chrX 93128410 93128480 -73521816 - L2a LINE L2 -5 3421 3352 1 1295 207 0 0 0 chrX 93128530 93128553 -73521743 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1295 759 242 116 27 chrX 93128598 93128857 -73521439 - B4A SINE B4 -6 286 5 1 1295 1836 136 18 32 chrX 93129011 93129352 -73520944 - RLTR15 LTR ERVK 0 359 24 1 1295 208 295 94 10 chrX 93129369 93129465 -73520831 - MER5A DNA MER1_type -46 143 40 1 1295 563 163 89 44 chrX 93129574 93129709 -73520587 + B1_Mus1 SINE Alu 3 143 -5 1 1295 203 238 0 0 chrX 93130923 93130965 -73519331 + (CTG)n Simple_repeat Simple_repeat 3 44 0 1 1295 290 308 0 113 chrX 93131572 93131722 -73518574 - MIR3 SINE MIR -28 180 48 1 1295 2106 114 11 11 chrX 93131882 93132238 -73518058 - RMER6A LTR ERVK 0 756 401 1 1295 629 117 78 0 chrX 93132239 93132342 -73517954 - RMER6A LTR ERVK -645 111 1 1 1295 182 236 194 0 chrX 93132644 93132716 -73517580 + L2 LINE L2 1489 1574 -1845 1 1295 1003 267 82 53 chrX 93132900 93133390 -73516906 + L1MA4A LINE L1 5426 5929 -374 2 1295 192 40 0 0 chrX 93134566 93134591 -73515705 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1295 201 171 24 0 chrX 93135526 93135567 -73514729 + GA-rich Low_complexity Low_complexity 3 44 0 2 1295 231 181 0 0 chrX 93135753 93135825 -73514471 + CT-rich Low_complexity Low_complexity 3 74 0 2 1295 714 176 0 0 chrX 93135881 93136034 -73514262 + CT-rich Low_complexity Low_complexity 2 154 0 2 1295 234 290 42 31 chrX 93136499 93136623 -73513673 + MIRb SINE MIR 136 260 -2 2 1295 197 277 0 21 chrX 93138565 93138613 -73511683 - L3 LINE CR1 -16 4473 4427 2 1295 190 261 51 131 chrX 93139042 93139179 -73511117 - L2c LINE L2 -1 3386 3261 2 1295 1251 61 0 0 chrX 93140635 93140783 -73509513 + B1_Mus1 SINE Alu 1 148 0 2 1295 194 128 26 0 chrX 93141012 93141051 -73509245 + MIRc SINE MIR 20 59 -209 2 1295 249 198 42 42 chrX 93141064 93141135 -73509161 - MIRb SINE MIR -8 260 185 2 1295 3429 46 0 5 chrX 93141312 93141728 -73508568 + L1Md_T LINE L1 6169 6582 0 2 1295 204 229 0 20 chrX 93142597 93142646 -73507650 + GA-rich Low_complexity Low_complexity 3 50 0 2 1295 604 262 0 0 chrX 93142707 93142848 -73507448 + MIR3 SINE MIR 54 194 -14 2 1295 318 245 81 106 chrX 93143223 93143346 -73506950 + PB1 SINE Alu 6 125 -2 2 1295 478 222 106 45 chrX 93144407 93144539 -73505757 + B1_Mus2 SINE Alu 1 140 -7 2 1295 183 42 0 0 chrX 93144541 93144565 -73505731 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 1295 266 309 10 21 chrX 93144751 93144847 -73505449 - BC1_Mm scRNA scRNA -56 96 2 2 1295 254 231 39 0 chrX 93145371 93145423 -73504873 - ID4_ SINE ID 0 83 30 2 1295 500 248 63 8 chrX 93145461 93145587 -73504709 - B1F SINE Alu -7 142 10 2 1295 226 406 30 8 chrX 93146130 93146264 -73504032 + MIR3 SINE MIR 44 180 -28 2 1295 1683 21 5 0 chrX 93146923 93147111 -73503185 - B2_Mm1t SINE B2 -4 189 1 2 1295 200 381 93 0 chrX 93147781 93147920 -73502376 + MIR3 SINE MIR 18 169 -39 2 1295 575 295 20 10 chrX 93148074 93148269 -73502027 + B3A SINE B2 1 197 -1 2 1295 279 0 0 0 chrX 93149028 93149059 -73501237 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2 1295 243 0 0 0 chrX 93149127 93149154 -73501142 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2 1295 202 271 46 23 chrX 93149169 93149256 -73501040 + L2c LINE L2 3269 3357 -30 2 1295 311 261 123 34 chrX 93149395 93149697 -73500599 + L1_Mur3 LINE L1 5095 5427 -1017 2 1295 1066 81 0 0 chrX 93149697 93149833 -73500463 + B1_Mus2 SINE Alu 1 136 -11 2 1295 200 59 29 0 chrX 93149833 93149867 -73500429 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1295 296 290 98 80 chrX 93149867 93149959 -73500337 + L1_Mur3 LINE L1 5389 5467 -413 2 1295 226 259 0 110 chrX 93149977 93150068 -73500228 + L1M2 LINE L1 5858 5938 -362 2 1295 198 0 0 0 chrX 93151072 93151094 -73499202 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 2 1295 204 40 0 0 chrX 93152611 93152636 -73497660 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1295 1073 88 12 0 chrX 93152844 93153004 -73497292 + B2_Mm2 SINE B2 20 181 -14 2 1295 278 200 0 0 chrX 93153122 93153177 -73497119 + B2_Mm2 SINE B2 47 101 -94 2 1295 360 0 0 0 chrX 93153204 93153244 -73497052 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 2 1295 227 237 62 62 chrX 93153341 93153422 -73496874 + MIR SINE MIR 34 114 -94 2 1295 260 278 0 14 chrX 93153578 93153651 -73496645 + MER92C LTR ERV1 483 554 0 2 1295 329 159 29 0 chrX 93154151 93154220 -73496076 - B3 SINE B2 -6 210 140 2 1295 232 160 40 0 chrX 93154259 93154309 -73495987 + T-rich Low_complexity Low_complexity 2 53 0 2 1295 585 40 0 0 chrX 93154318 93154393 -73495903 - L1_Mus2 LINE L1 -1 6565 6491 2 1295 227 300 11 34 chrX 93154570 93154746 -73495550 + CT-rich Low_complexity Low_complexity 3 174 0 2 1295 1272 118 38 0 chrX 93155301 93155487 -73494809 - B2_Mm2 SINE B2 -2 193 1 2 1295 273 57 0 0 chrX 93155540 93155575 -73494721 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1295 557 132 11 19 chrX 93155597 93155712 -73494584 + RLTR21 LTR ERVK 1108 1260 -144 2 1295 6925 122 32 7 chrX 93155715 93156871 -73493425 - RLTR21 LTR ERVK -387 1185 1 2 1295 22 35 0 0 chrX 93157803 93157832 -73492464 + AT_rich Low_complexity Low_complexity 1 29 0 2 1295 2480 175 12 10 chrX 93158750 93159235 -73491061 + RMER15 LTR ERVL 90 575 0 2 1295 1220 61 0 0 chrX 93159263 93159410 -73490886 - B1_Mus2 SINE Alu 0 147 1 2 1295 649 192 16 19 chrX 93159411 93159562 -73490734 - RMER6A LTR ERVK -4 752 518 2 1295 256 301 6 71 chrX 93160930 93161098 -73489198 + (TCTCTG)n Simple_repeat Simple_repeat 6 162 0 2 1295 1416 123 213 40 chrX 93164146 93164494 -73485802 + RMER17C LTR ERVK 3 410 0 2 1295 1128 69 14 0 chrX 93164860 93165005 -73485291 - B1_Mus2 SINE Alu 0 147 1 2 1295 303 104 0 0 chrX 93166820 93166868 -73483428 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 2 1295 3291 41 5 5 chrX 93167049 93167445 -73482851 - MTA_Mm LTR MaLR 0 396 1 2 1295 8268 56 35 1 chrX 93167445 93168507 -73481789 - MTA_Mm-int LTR MaLR 0 1098 1 2 1295 3311 28 15 5 chrX 93168507 93168899 -73481397 - MTA_Mm LTR MaLR 0 396 1 2 1295 240 250 0 18 chrX 93169102 93169159 -73481137 + ID_B1 SINE B4 107 162 -62 2 1295 1090 91 0 0 chrX 93169160 93169303 -73480993 + B1_Mus1 SINE Alu 3 145 -3 2 1295 1169 88 0 4 chrX 93169306 93169581 -73480715 + (GAA)n Simple_repeat Simple_repeat 1 274 0 2 1295 241 221 87 14 chrX 93169592 93169661 -73480635 + ID_B1 SINE B4 147 220 -4 2 1295 13561 174 102 12 chrX 93169739 93171811 -73478485 + L1_Mur3 LINE L1 2397 4563 -1317 2 1295 845 173 58 53 chrX 93171811 93172000 -73478296 - B2_Mm2 SINE B2 -5 190 1 2 1295 13561 174 102 12 chrX 93172000 93172819 -73477477 + L1_Mur3 LINE L1 4564 5548 -332 2 1295 3538 119 42 2 chrX 93172839 93173425 -73476871 + RMER17B LTR ERVK 1 610 -348 2 1295 2870 120 109 25 chrX 93173425 93173965 -73476331 + RLTR1D LTR ERV1 1 589 -16 2 1295 832 167 324 4 chrX 93173980 93174246 -73476050 + RMER17B LTR ERVK 607 958 0 2 1295 3180 60 0 3 chrX 93174252 93174640 -73475656 + L1Md_F2 LINE L1 6011 6397 -185 2 1295 1540 138 124 0 chrX 93174640 93174931 -73475365 + IAPEY3_LTR LTR ERVK 1 327 -5 2 1295 1344 51 6 0 chrX 93174946 93175123 -73475173 + L1Md_F2 LINE L1 6405 6582 0 2 1295 4779 157 33 5 chrX 93175123 93175269 -73475027 + Lx4B LINE L1 6010 6173 -885 2 1295 279 54 0 0 chrX 93175269 93175306 -73474990 + (GGGTG)n Simple_repeat Simple_repeat 5 41 0 2 1295 4779 158 32 11 chrX 93175306 93176095 -73474201 + Lx4B LINE L1 6174 6997 -61 2 1295 300 70 0 0 chrX 93176095 93176138 -73474158 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1295 362 209 162 0 chrX 93176883 93176974 -73473322 + ID_B1 SINE B4 103 210 -14 2 1295 279 54 0 0 chrX 93176974 93177011 -73473285 + (CAAT)n Simple_repeat Simple_repeat 4 40 0 2 1295 362 209 162 0 chrX 93177011 93177024 -73473272 + ID_B1 SINE B4 211 223 -1 2 1295 208 341 57 0 chrX 93177167 93177255 -73473041 - L2b LINE L2 -5 3370 3278 2 1295 246 220 0 0 chrX 93177290 93177340 -73472956 + MIR SINE MIR 66 115 -147 2 1295 292 217 23 57 chrX 93177451 93177539 -73472757 - MLT1A1 LTR MaLR -4 404 320 2 1295 265 208 147 40 chrX 93177683 93177758 -73472538 - MLT1A1 LTR MaLR -305 85 3 2 1295 1521 74 0 19 chrX 93177829 93178035 -73472261 - L1Md_T LINE L1 0 6582 6381 2 1295 289 236 87 24 chrX 93178045 93178171 -73472125 - Lx7 LINE L1 0 7696 7563 2 1295 21 0 0 0 chrX 93178415 93178436 -73471860 + AT_rich Low_complexity Low_complexity 1 21 0 2 1295 441 0 0 0 chrX 93178499 93178548 -73471748 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1295 832 175 19 135 chrX 93179269 93179529 -73470767 - ORR1B1 LTR MaLR -152 242 11 2 1295 847 269 95 37 chrX 93179732 93180141 -73470155 - L1MC1 LINE L1 0 6333 5901 2 1295 1961 168 62 0 chrX 93180256 93180613 -73469683 - RLTR30 LTR ERV1 0 379 1 2 1295 4294 140 54 22 chrX 93180689 93181509 -73468787 - RMER13B LTR ERVK 0 908 63 2 1295 417 218 16 24 chrX 93181518 93181645 -73468651 - L1MDa LINE L1 -4402 2231 2106 2 1295 3648 139 117 3 chrX 93181653 93182259 -73468037 - RLTR33 LTR ERVK -3 675 1 2 1295 729 294 56 48 chrX 93182420 93182913 -73467383 + Lx8 LINE L1 5615 6123 -1573 2 1295 557 295 67 0 chrX 93182976 93183125 -73467171 + B3 SINE B2 2 160 -56 2 1295 1018 227 36 5 chrX 93183181 93183402 -73466894 + MTD LTR MaLR 146 373 -46 2 1295 637 307 192 62 chrX 93183763 93184078 -73466218 - Lx8 LINE L1 -235 7238 6849 2 1295 261 0 0 0 chrX 93184078 93184107 -73466189 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 2 1295 637 307 192 62 chrX 93184107 93184191 -73466105 - Lx8 LINE L1 -625 6848 6787 2 1295 666 211 76 98 chrX 93184199 93184517 -73465779 + RMER2 LTR ERV1 3 446 -121 2 1295 1195 68 0 0 chrX 93184886 93185033 -73465263 + B1_Mus1 SINE Alu 2 148 0 2 1295 333 62 0 0 chrX 93185033 93185081 -73465215 + (A)n Simple_repeat Simple_repeat 1 48 0 2 1295 1496 277 64 5 chrX 93185258 93185399 -73464897 - Lx8 LINE L1 -757 6716 6562 2 1295 3416 33 5 0 chrX 93185399 93185793 -73464503 + MTA_Mm LTR MaLR 1 396 0 2 1295 1496 277 64 5 chrX 93185793 93186086 -73464210 - Lx8 LINE L1 -912 6561 6257 2 1295 2235 92 62 37 chrX 93186108 93186482 -73463814 - Lx LINE L1 -42 6612 6230 2 1295 243 171 0 0 chrX 93186471 93186512 -73463784 + Lx LINE L1 6237 6277 -377 2 1295 1226 52 11 17 chrX 93186630 93186808 -73463488 + L1_Mus3 LINE L1 6447 6623 -15 2 1295 649 232 12 155 chrX 93187014 93187259 -73463037 + MTE2a LTR MaLR 10 219 -160 2 1295 2865 108 14 12 chrX 93187378 93187810 -73462486 + L1_Mus4 LINE L1 6204 6636 0 2 1295 375 103 0 0 chrX 93188051 93188109 -73462187 - ORR1A3 LTR MaLR -8 318 261 2 1295 1221 73 6 11 chrX 93188109 93188288 -73462008 - RMER16 LTR ERVK 0 533 356 2 1295 456 19 0 0 chrX 93188839 93188892 -73461404 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 1295 1174 271 107 63 chrX 93189731 93190346 -73459950 + RLTR26 LTR ERVK 1 642 0 2 1295 1138 75 7 0 chrX 93191886 93192033 -73458263 + B1_Mus1 SINE Alu 1 148 0 3 1296 2112 192 69 105 chrX 93192254 93192835 -73457461 + RMER19B LTR ERVK 1 560 -342 3 1296 682 273 93 53 chrX 93192843 93193199 -73457097 - Lx9 LINE L1 -1554 6090 5721 3 1296 925 152 42 42 chrX 93193200 93193392 -73456904 - B2_Mm2 SINE B2 -1 194 3 3 1296 427 193 152 34 chrX 93193448 93193566 -73456730 - RSINE1 SINE B4 0 165 34 3 1296 211 260 62 49 chrX 93193649 93193730 -73456566 - ID4_ SINE ID 0 83 2 3 1296 1318 86 37 16 chrX 93193744 93193933 -73456363 - B2_Mm2 SINE B2 0 195 3 3 1296 242 240 70 96 chrX 93193936 93194051 -73456245 - PB1D10 SINE Alu 0 120 9 3 1296 631 275 139 8 chrX 93194138 93194376 -73455920 + MTEa LTR MaLR 3 271 -108 3 1296 737 191 15 24 chrX 93194519 93194712 -73455584 - B3 SINE B2 0 195 8 3 1296 207 191 45 45 chrX 93194908 93194974 -73455322 + MIR SINE MIR 88 153 -115 3 1296 186 43 0 0 chrX 93195573 93195596 -73454700 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 1296 833 275 30 17 chrX 93195621 93195858 -73454438 - B4 SINE B4 -20 272 33 3 1296 448 227 41 0 chrX 93195854 93195951 -73454345 - PB1D10 SINE Alu -16 101 1 3 1296 234 45 0 64 chrX 93196509 93196556 -73453740 + (CCCCCT)n Simple_repeat Simple_repeat 2 45 0 3 1296 387 0 0 0 chrX 93196568 93196611 -73453685 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 3 1296 8528 50 1 1 chrX 93196618 93198340 -73451956 - L1Md_F2 LINE L1 -12 6570 4850 3 1296 1164 214 82 31 chrX 93198338 93198691 -73451605 - Lx9 LINE L1 -151 5696 5326 3 1296 3794 106 3 25 chrX 93198745 93199334 -73450962 - MT2B2 LTR ERVL -8 576 1 3 1296 411 260 56 82 chrX 93199334 93199575 -73450721 - Lx9 LINE L1 -507 5373 5080 3 1296 2003 203 89 65 chrX 93199571 93200235 -73450061 + Lx9 LINE L1 4415 5094 -753 3 1296 613 197 86 21 chrX 93200256 93200396 -73449900 - B1_Mur4 SINE Alu 0 150 2 3 1296 194 254 33 33 chrX 93200397 93200458 -73449838 + MIRc SINE MIR 119 179 -89 3 1296 302 363 10 19 chrX 93200552 93200656 -73449640 + B1F SINE Alu 1 103 -46 3 1296 207 0 0 0 chrX 93200803 93200826 -73449470 + (TCC)n Simple_repeat Simple_repeat 2 24 0 3 1296 398 290 0 30 chrX 93201995 93202130 -73448166 - Lx9 LINE L1 -210 7434 7304 3 1296 1127 78 0 0 chrX 93202195 93202337 -73447959 + B1_Mm SINE Alu 1 142 -5 3 1296 573 15 0 0 chrX 93202344 93202410 -73447886 + (GGA)n Simple_repeat Simple_repeat 2 67 0 3 1296 201 296 87 48 chrX 93202567 93202670 -73447626 + MIR3 SINE MIR 91 197 -11 3 1296 609 27 0 0 chrX 93203228 93203303 -73446993 + (GA)n Simple_repeat Simple_repeat 2 76 0 3 1296 364 211 78 0 chrX 93203500 93203636 -73446660 + Lx7 LINE L1 5318 5512 -371 3 1296 302 316 0 171 chrX 93203881 93203949 -73446347 + RSINE1 SINE B4 11 70 -95 3 1296 477 0 0 0 chrX 93203949 93204002 -73446294 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1296 302 316 0 171 chrX 93204002 93204120 -73446176 + RSINE1 SINE B4 71 165 0 3 1296 763 273 90 77 chrX 93204129 93204714 -73445582 + Lx7 LINE L1 5536 6155 -1541 3 1296 543 321 26 40 chrX 93204777 93205004 -73445292 + B4A SINE B4 11 234 -58 3 1296 424 363 0 7 chrX 93205018 93205165 -73445131 + MLT1D LTR MaLR 254 399 -106 3 1296 573 217 352 19 chrX 93205181 93205491 -73444805 + Lx7 LINE L1 7284 7696 0 3 1296 1292 137 5 5 chrX 93206587 93206793 -73443503 - Lx2 LINE L1 0 6997 6792 3 1296 1666 145 12 2 chrX 93208115 93208403 -73441893 - Lx5 LINE L1 -939 6069 5783 3 1296 6907 84 79 3 chrX 93208395 93209413 -73440883 - L1_Mus3 LINE L1 -3 6635 5529 3 1296 5145 124 7 35 chrX 93209413 93209928 -73440368 - Lx5 LINE L1 -87 5790 5290 3 1296 860 169 6 0 chrX 93209928 93210088 -73440208 - Lx2 LINE L1 -3 6994 6834 3 1296 5145 124 7 35 chrX 93210088 93210391 -73439905 - Lx5 LINE L1 -588 5289 4995 3 1296 559 274 0 22 chrX 93210406 93210544 -73439752 + RSINE1 SINE B4 2 136 -29 3 1296 476 298 32 116 chrX 93211030 93211122 -73439174 + B4 SINE B4 5 84 -208 3 1296 800 175 21 0 chrX 93211122 93211265 -73439031 + B1_Mus2 SINE Alu 1 146 -1 3 1296 476 298 32 116 chrX 93211265 93211449 -73438847 + B4 SINE B4 85 258 -34 3 1296 2554 112 50 2 chrX 93211647 93212050 -73438246 + Lx2A1 LINE L1 6587 7008 0 3 1296 598 148 260 7 chrX 93212253 93212403 -73437893 + RMER1C Other Other 1152 1339 -3 3 1296 1067 290 69 16 chrX 93212452 93212919 -73437377 + L1MA4 LINE L1 5515 5966 -601 3 1296 294 269 60 69 chrX 93213261 93213377 -73436919 + PB1D10 SINE Alu 2 116 -1 3 1296 780 285 78 50 chrX 93213502 93213788 -73436508 + ORR1D2 LTR MaLR 19 313 -57 3 1296 815 98 301 0 chrX 93213788 93213931 -73436365 + B2_Mm2 SINE B2 3 188 -7 3 1296 780 285 78 50 chrX 93213931 93213965 -73436331 + ORR1D2 LTR MaLR 314 348 -22 3 1296 207 0 0 0 chrX 93214414 93214437 -73435859 + (CAA)n Simple_repeat Simple_repeat 1 23 0 3 1296 250 354 0 12 chrX 93214438 93214518 -73435778 - B1F2 SINE Alu -67 82 4 3 1296 216 0 0 0 chrX 93214755 93214779 -73435517 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 3 1296 277 43 0 61 chrX 93214779 93214828 -73435468 + (CAAA)n Simple_repeat Simple_repeat 1 46 0 3 1296 325 182 121 0 chrX 93215257 93215323 -73434973 + ID4 SINE ID 9 82 -70 3 1296 257 296 127 0 chrX 93215448 93215567 -73434729 - MIR SINE MIR -59 149 21 3 1296 461 200 36 18 chrX 93216977 93217089 -73433207 - B1F SINE Alu 0 149 36 3 1296 327 291 0 0 chrX 93217555 93217634 -73432662 + ID4_ SINE ID 2 80 -3 3 1296 767 228 81 14 chrX 93217942 93218151 -73432145 + ID_B1 SINE B4 2 224 0 3 1296 3405 38 5 0 chrX 93218248 93218642 -73431654 - MTA_Mm LTR MaLR 0 396 1 3 1296 470 191 0 45 chrX 93218747 93218835 -73431461 + B1_Mus2 SINE Alu 1 84 -63 3 1296 495 329 7 7 chrX 93218957 93219110 -73431186 + RSINE1 SINE B4 11 163 -2 3 1296 209 179 0 0 chrX 93219518 93219557 -73430739 + (CTG)n Simple_repeat Simple_repeat 1 39 0 3 1296 517 256 250 0 chrX 93220223 93220395 -73429901 + B3 SINE B2 2 216 0 3 1296 21 0 0 0 chrX 93220395 93220416 -73429880 + AT_rich Low_complexity Low_complexity 1 21 0 3 1296 974 148 0 0 chrX 93220426 93220568 -73429728 + B1_Mur4 SINE Alu 3 144 -6 3 1296 1193 48 0 7 chrX 93221872 93222018 -73428278 + B1_Mus2 SINE Alu 2 146 -1 3 1296 261 0 0 0 chrX 93222024 93222053 -73428243 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1296 685 247 69 0 chrX 93222054 93222228 -73428068 + ID_B1 SINE B4 27 212 -12 3 1296 4909 128 32 7 chrX 93222229 93222945 -73427351 - RMER19A LTR ERVK -3 734 1 3 1296 487 255 67 24 chrX 93223129 93223317 -73426979 - ORR1D1 LTR MaLR -60 310 91 3 1296 407 192 0 13 chrX 93223320 93223399 -73426897 + MTC LTR MaLR 2 79 -342 3 1296 707 197 15 0 chrX 93223390 93223522 -73426774 - ORR1D1 LTR MaLR -240 134 1 3 1296 2925 99 48 2 chrX 93223938 93224372 -73425924 - L1_Mus3 LINE L1 0 6638 6185 3 1296 315 0 0 0 chrX 93224393 93224428 -73425868 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1296 198 0 0 0 chrX 93224519 93224541 -73425755 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 3 1296 4018 41 37 12 chrX 93224827 93225342 -73424954 - L1_Mus2 LINE L1 0 6566 6039 3 1296 205 250 33 16 chrX 93225651 93225712 -73424584 - MIRm SINE MIR -145 131 70 3 1296 432 360 28 0 chrX 93225722 93225900 -73424396 - MIR SINE MIR -57 205 23 3 1296 1139 112 56 0 chrX 93226742 93226921 -73423375 - B2_Mm2 SINE B2 -5 190 2 3 1296 4309 164 51 71 chrX 93226922 93227824 -73422472 - RMER19B LTR ERVK -18 884 1 3 1296 393 255 28 34 chrX 93228012 93228131 -73422165 + B1F SINE Alu 28 148 -1 3 1296 435 267 59 30 chrX 93228156 93228291 -73422005 + MTE2a LTR MaLR 187 325 -54 3 1296 262 345 86 40 chrX 93228420 93228595 -73421701 - MIRb SINE MIR -69 199 17 3 1296 207 0 0 0 chrX 93228739 93228762 -73421534 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1296 6381 75 3 3 chrX 93229218 93230057 -73420239 + L1_Mus3 LINE L1 5784 6622 -16 3 1296 1091 88 0 7 chrX 93230057 93230205 -73420091 + B1_Mus1 SINE Alu 2 148 0 3 1296 1659 173 90 12 chrX 93230242 93230575 -73419721 - ORR1D1 LTR MaLR -15 359 1 3 1296 402 270 57 12 chrX 93230575 93230681 -73419615 + B1F1 SINE Alu 12 127 0 3 1296 1084 114 11 0 chrX 93231282 93231458 -73418838 + (TCCC)n Simple_repeat Simple_repeat 3 180 0 3 1296 347 316 41 0 chrX 93231496 93231594 -73418702 - ID_B1 SINE B4 -6 218 117 3 1296 243 298 124 9 chrX 93231617 93231722 -73418574 - PB1D10 SINE Alu 0 117 1 3 1296 297 333 0 0 chrX 93232036 93232114 -73418182 - ID_B1 SINE B4 -56 168 91 3 1296 2543 296 148 42 chrX 93232461 93232748 -73417548 - Lx8 LINE L1 -195 7278 6953 3 1296 685 22 22 0 chrX 93232748 93232839 -73417457 + (CA)n Simple_repeat Simple_repeat 2 94 0 3 1296 2543 278 152 35 chrX 93232839 93233996 -73416300 - Lx8 LINE L1 -521 6952 5626 3 1296 267 254 28 14 chrX 93234014 93234086 -73416210 - B1_Mur2 SINE Alu -1 148 76 3 1296 432 97 0 0 chrX 93234123 93234185 -73416111 + (CATA)n Simple_repeat Simple_repeat 1 62 0 3 1296 423 0 0 0 chrX 93234185 93234231 -73416065 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 1296 292 307 14 14 chrX 93234234 93234376 -73415920 - L1M4 LINE L1 -3277 2869 2728 3 1296 754 246 8 115 chrX 93234395 93234629 -73415667 - B3 SINE B2 -7 209 1 3 1296 1090 224 0 0 chrX 93234647 93234857 -73415439 - B3 SINE B2 -6 210 1 3 1296 595 246 32 0 chrX 93234877 93235003 -73415293 - ID_B1 SINE B4 -9 215 86 3 1296 345 320 56 32 chrX 93235088 93235214 -73415082 + ID_B1 SINE B4 84 212 -12 3 1296 307 156 62 0 chrX 93235219 93235283 -73415013 - L1M3 LINE L1 -3526 2614 2547 3 1296 228 222 56 0 chrX 93235547 93235601 -73414695 - PB1D10 SINE Alu -2 115 59 3 1296 405 339 9 0 chrX 93235718 93235833 -73414463 - PB1D10 SINE Alu 0 117 2 4 1296 23 33 0 0 chrX 93235833 93235863 -73414433 + AT_rich Low_complexity Low_complexity 1 30 0 4 1296 534 259 62 149 chrX 93235925 93236120 -73414176 + MTE2a LTR MaLR 1 178 -201 4 1296 1292 294 21 40 chrX 93236001 93236380 -73413916 + MT2A LTR ERVL 55 426 -107 4 1296 2365 258 88 39 chrX 93236452 93237070 -73413226 + Lx9 LINE L1 6491 7156 -488 4 1296 216 67 0 0 chrX 93237070 93237100 -73413196 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1296 2365 258 88 39 chrX 93237100 93237319 -73412977 + Lx9 LINE L1 7157 7369 -275 4 1296 381 43 0 0 chrX 93237343 93237390 -73412906 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1296 3491 130 42 149 chrX 93237439 93238264 -73412032 - RMER19A LTR ERVK 0 737 1 4 1296 21 0 0 0 chrX 93238338 93238359 -73411937 + AT_rich Low_complexity Low_complexity 1 21 0 4 1296 180 111 0 0 chrX 93238487 93238514 -73411782 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 4 1296 280 225 26 78 chrX 93238530 93238607 -73411689 - RSINE1 SINE B4 0 165 93 4 1296 294 314 101 16 chrX 93238698 93238886 -73411410 - B3 SINE B2 -2 214 11 4 1296 627 243 59 33 chrX 93238736 93238889 -73411407 - RSINE1 SINE B4 0 165 9 4 1296 341 229 12 0 chrX 93238905 93238988 -73411308 - L1MB4 LINE L1 -5263 1344 1261 4 1296 241 360 15 39 chrX 93239014 93239144 -73411152 - PB1 SINE Alu 0 127 1 4 1296 338 264 28 0 chrX 93239299 93239405 -73410891 - L1MB7 LINE L1 -48 6136 6028 4 1296 507 374 84 0 chrX 93239406 93239572 -73410724 + ID_B1 SINE B4 4 183 -41 4 1296 312 301 25 66 chrX 93239621 93239742 -73410554 + PB1D10 SINE Alu 1 116 -1 4 1296 288 286 167 0 chrX 93239757 93239883 -73410413 + B1F1 SINE Alu 3 149 0 4 1296 419 243 223 9 chrX 93239888 93240000 -73410296 + B1F2 SINE Alu 2 137 -12 4 1296 237 132 0 0 chrX 93240004 93240042 -73410254 + (CAA)n Simple_repeat Simple_repeat 2 39 0 4 1296 331 254 0 0 chrX 93240056 93240123 -73410173 + ID_B1 SINE B4 91 157 -67 4 1296 1129 56 39 17 chrX 93240213 93240394 -73409902 + MusHAL1 LINE L1 1896 2080 -632 4 1296 23 0 0 0 chrX 93240551 93240574 -73409722 + AT_rich Low_complexity Low_complexity 1 23 0 4 1296 242 262 0 37 chrX 93240693 93240800 -73409496 + T-rich Low_complexity Low_complexity 2 104 0 4 1296 24 32 0 0 chrX 93241493 93241524 -73408772 + AT_rich Low_complexity Low_complexity 1 31 0 4 1296 22 35 0 0 chrX 93241623 93241652 -73408644 + AT_rich Low_complexity Low_complexity 1 29 0 4 1296 1183 61 0 0 chrX 93241654 93241801 -73408495 + B1_Mm SINE Alu 1 147 0 4 1296 25 65 0 0 chrX 93241911 93241957 -73408339 + AT_rich Low_complexity Low_complexity 1 46 0 4 1296 303 263 140 11 chrX 93242301 93242411 -73407885 + MLT1A1 LTR MaLR 40 170 -238 4 1296 344 269 9 18 chrX 93242481 93242591 -73407705 + MLT1A1 LTR MaLR 300 408 0 4 1296 341 349 0 0 chrX 93242630 93242739 -73407557 + PB1D10 SINE Alu 1 109 -8 4 1296 416 212 93 33 chrX 93242796 93242947 -73407349 - L1MD LINE L1 -650 5592 5433 4 1296 216 368 146 29 chrX 93243021 93243267 -73407029 - L2c LINE L2 -57 3330 3056 4 1296 396 0 0 0 chrX 93243646 93243690 -73406606 + (TC)n Simple_repeat Simple_repeat 2 45 0 4 1296 477 0 0 0 chrX 93243748 93243801 -73406495 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 1296 375 281 51 10 chrX 93243838 93243941 -73406355 - PB1D10 SINE Alu -23 124 21 4 1296 382 292 88 0 chrX 93244538 93244651 -73405645 - B1F SINE Alu -22 127 5 4 1296 353 362 6 95 chrX 93244662 93244701 -73405595 + ID SINE ID 50 73 -151 4 1296 451 325 0 45 chrX 93244701 93244833 -73405463 + B1F1 SINE Alu 1 126 -23 4 1296 3298 136 91 18 chrX 93244842 93244925 -73405371 + RMER6A LTR ERVK 84 166 -590 4 1296 1280 91 17 0 chrX 93244925 93245101 -73405195 - B2_Mm2 SINE B2 -15 180 2 4 1296 3298 136 91 18 chrX 93245101 93245644 -73404652 + RMER6A LTR ERVK 167 755 -1 4 1296 614 292 62 29 chrX 93246175 93246383 -73403913 - ID_B1 SINE B4 -6 218 4 4 1296 450 339 0 88 chrX 93246401 93246483 -73403813 - RSINE1 SINE B4 0 165 95 4 1296 4881 98 49 13 chrX 93246483 93247194 -73403102 - RMER19A LTR ERVK 0 737 1 4 1296 450 339 0 88 chrX 93247194 93247292 -73403004 - RSINE1 SINE B4 -71 94 1 4 1296 521 268 21 21 chrX 93247295 93247440 -73402856 - B1F SINE Alu 0 149 5 4 1296 845 269 75 39 chrX 93247639 93247894 -73402402 + B4 SINE B4 9 272 -20 4 1296 390 294 100 31 chrX 93247954 93248084 -73402212 + ID_B1 SINE B4 82 220 -4 4 1296 426 85 0 0 chrX 93248522 93248581 -73401715 + (GGGGA)n Simple_repeat Simple_repeat 4 62 0 4 1296 549 282 26 13 chrX 93248762 93248913 -73401383 - RSINE1 SINE B4 -11 154 2 4 1296 788 156 0 38 chrX 93248959 93249092 -73401204 + B1_Mur3 SINE Alu 4 131 -18 4 1296 411 304 137 7 chrX 93249144 93249290 -73401006 - ID_B1 SINE B4 -1 223 59 4 1296 410 235 35 23 chrX 93249328 93249415 -73400881 + B1F SINE Alu 11 98 -51 4 1296 316 286 45 62 chrX 93249874 93249986 -73400310 + B1F2 SINE Alu 37 146 -3 4 1296 666 285 71 14 chrX 93250021 93250231 -73400065 + ID_B1 SINE B4 1 222 -2 4 1296 261 361 103 10 chrX 93250409 93250613 -73399683 + L2a LINE L2 3101 3323 -103 4 1296 29 68 0 13 chrX 93250676 93250711 -73399585 + AT_rich Low_complexity Low_complexity 1 35 0 4 1296 572 274 83 11 chrX 93250711 93250892 -73399404 - B3A SINE B2 -1 197 4 4 1296 29 68 0 13 chrX 93250892 93250931 -73399365 + AT_rich Low_complexity Low_complexity 1 39 0 4 1296 231 36 0 0 chrX 93250963 93250991 -73399305 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 4 1296 6190 190 49 9 chrX 93251049 93252270 -73398026 - Lx5 LINE L1 0 7050 5781 4 1296 387 0 0 0 chrX 93252280 93252323 -73397973 + (TATG)n Simple_repeat Simple_repeat 4 46 0 4 1296 335 106 27 18 chrX 93252330 93252394 -73397902 - B2_Mm2 SINE B2 -102 114 47 4 1296 1077 142 11 0 chrX 93252480 93252656 -73397640 - B2_Mm1t SINE B2 -14 179 2 4 1296 386 167 18 32 chrX 93252656 93252765 -73397531 - Lx5 LINE L1 -1237 5813 5695 4 1296 247 206 39 52 chrX 93252751 93252828 -73397468 - Lx3A LINE L1 -1239 5742 5667 4 1296 692 183 78 23 chrX 93252828 93252957 -73397339 - B1_Mur4 SINE Alu -13 137 2 4 1296 468 292 61 27 chrX 93252962 93252986 -73397310 - B3 SINE B2 -28 188 165 4 1296 237 65 0 0 chrX 93252986 93253017 -73397279 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1296 512 284 54 53 chrX 93253017 93253168 -73397128 - B3A SINE B2 -52 164 16 4 1296 332 336 31 78 chrX 93253137 93253266 -73397030 + ID_B1 SINE B4 88 210 -14 4 1296 427 169 24 16 chrX 93253535 93253629 -73396667 + CT-rich Low_complexity Low_complexity 34 128 0 4 1296 1747 133 81 38 chrX 93253629 93253973 -73396323 - RLTR15 LTR ERVK 0 359 1 4 1296 427 169 24 16 chrX 93253973 93254004 -73396292 + polypyrimidine Low_complexity Low_complexity 2 33 0 4 1296 283 264 40 9 chrX 93254195 93254292 -73396004 + MIRb SINE MIR 26 125 -143 4 1296 329 327 60 54 chrX 93254324 93254492 -73395804 - MTD LTR MaLR -23 396 228 4 1296 345 151 22 30 chrX 93254326 93254418 -73395878 + MTC LTR MaLR 314 408 -13 4 1296 260 275 43 14 chrX 93254611 93254681 -73395615 + B1F1 SINE Alu 10 81 -68 4 1296 249 57 0 0 chrX 93254715 93254750 -73395546 + (TTG)n Simple_repeat Simple_repeat 2 36 0 4 1296 1462 215 66 10 chrX 93254750 93255051 -73395245 + MTD LTR MaLR 22 339 -80 4 1296 6690 55 0 0 chrX 93255051 93255924 -73394372 + L1Md_F2 LINE L1 4714 5586 -297 4 1296 8101 45 2 0 chrX 93255924 93256906 -73393390 + L1Md_F2 LINE L1 5587 6570 -12 4 1296 314 225 88 0 chrX 93256909 93256989 -73393307 + MTD LTR MaLR 335 421 0 4 1296 527 290 38 14 chrX 93256995 93257171 -73393125 + MTD-int LTR MaLR 13 176 -922 4 1296 3717 20 0 0 chrX 93257171 93257618 -73392678 + L1Md_F2 LINE L1 5140 5586 -297 4 1296 8017 49 2 6 chrX 93257618 93258618 -73391678 + L1Md_F2 LINE L1 5587 6582 0 4 1296 1657 281 65 121 chrX 93258619 93259608 -73390688 + MTD-int LTR MaLR 171 1103 -155 4 1296 551 269 188 0 chrX 93260088 93260248 -73390048 - B3 SINE B2 0 216 27 4 1296 664 222 52 21 chrX 93260268 93260461 -73389835 + Lx3_Mus LINE L1 3768 3966 -1914 4 1296 866 313 151 4 chrX 93260466 93261011 -73389285 + Lx8 LINE L1 6807 7431 -42 4 1296 377 264 24 48 chrX 93261022 93261189 -73389107 + Lx3_Mus LINE L1 5243 5405 -475 4 1296 845 262 134 24 chrX 93261270 93261751 -73388545 + Lx3_Mus LINE L1 5378 5917 -1727 4 1296 2545 144 48 158 chrX 93262118 93262471 -73387825 + RMER6A LTR ERVK 1 290 -466 4 1296 5455 79 63 1 chrX 93262471 93263246 -73387050 + Lx3_Mus LINE L1 6187 7009 0 4 1296 2545 144 48 158 chrX 93263246 93263335 -73386961 + RMER6A LTR ERVK 291 381 -375 4 1296 522 0 0 0 chrX 93263335 93263393 -73386903 + (GA)n Simple_repeat Simple_repeat 1 58 0 4 1296 2545 144 48 158 chrX 93263393 93263619 -73386677 + RMER6A LTR ERVK 382 595 -161 4 1296 243 0 0 0 chrX 93263647 93263674 -73386622 + (GCTG)n Simple_repeat Simple_repeat 1 27 0 4 1296 552 30 0 0 chrX 93263681 93263747 -73386549 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 1296 597 200 35 62 chrX 93263750 93263894 -73386402 - B1_Mus2 SINE Alu -7 140 1 4 1296 2737 22 0 6 chrX 93263903 93264224 -73386072 - L1Md_F3 LINE L1 -13 6571 6253 4 1296 351 67 0 0 chrX 93264226 93264271 -73386025 + L1Md_F3 LINE L1 6217 6261 -323 4 1296 1836 253 85 28 chrX 93264330 93264940 -73385356 + Lx8 LINE L1 6452 7096 -377 4 1296 391 284 26 6 chrX 93265076 93265232 -73385064 + Lx7 LINE L1 5735 5893 -1803 4 1296 449 223 8 0 chrX 93265248 93265378 -73384918 + (TA)n Simple_repeat Simple_repeat 1 131 0 4 1296 2455 218 70 27 chrX 93265540 93266173 -73384123 + Lx8 LINE L1 6297 6956 -517 4 1296 311 323 20 10 chrX 93266299 93266399 -73383897 + RMER15 LTR ERVL 370 470 -105 4 1296 1054 140 17 0 chrX 93266577 93266755 -73383541 - L1_Mus3 LINE L1 -6 6632 6452 4 1296 430 321 28 35 chrX 93266867 93267012 -73383284 - B1F SINE Alu 0 149 6 4 1296 339 382 66 0 chrX 93267173 93267309 -73382987 + B1F1 SINE Alu 4 148 -1 4 1296 210 227 216 0 chrX 93267374 93267462 -73382834 + PB1 SINE Alu 11 117 -10 4 1296 474 18 0 0 chrX 93267554 93267609 -73382687 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1296 199 326 76 0 chrX 93267686 93267778 -73382518 + L3 LINE CR1 4016 4114 -375 4 1296 39 50 0 0 chrX 93267799 93267859 -73382437 + AT_rich Low_complexity Low_complexity 1 60 0 4 1296 762 175 0 68 chrX 93267869 93268016 -73382280 + B1_Mus1 SINE Alu 10 146 -2 4 1296 573 15 0 0 chrX 93268934 93269000 -73381296 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 1296 314 293 0 29 chrX 93269048 93269150 -73381146 - Lx9 LINE L1 -1742 5902 5804 5 1296 240 318 105 12 chrX 93269186 93269272 -73381024 - B4A SINE B4 -147 145 52 5 1296 265 203 200 15 chrX 93269243 93269308 -73380988 - ID4_ SINE ID -5 78 2 5 1296 3330 23 15 0 chrX 93269405 93269795 -73380501 + MTA_Mm LTR MaLR 1 396 0 5 1296 1118 38 0 0 chrX 93269795 93269926 -73380370 - B1_Mus2 SINE Alu -15 132 2 5 1296 1331 264 93 8 chrX 93269984 93270481 -73379815 + Lx9 LINE L1 6957 7495 -149 5 1296 462 230 16 66 chrX 93270565 93270686 -73379610 + PB1D10 SINE Alu 3 117 0 5 1296 207 0 0 0 chrX 93270983 93271006 -73379290 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 1296 1488 235 70 9 chrX 93271027 93271370 -73378926 + MTD LTR MaLR 56 419 0 5 1296 244 298 0 0 chrX 93271455 93271512 -73378784 + ID4 SINE ID 12 68 -15 5 1296 257 356 33 0 chrX 93271701 93271791 -73378505 - MIR SINE MIR -75 133 41 5 1296 450 94 0 0 chrX 93272099 93272163 -73378133 + (TG)n Simple_repeat Simple_repeat 2 65 0 5 1296 495 151 216 26 chrX 93272166 93272282 -73378014 - B1_Mus1 SINE Alu -10 138 1 5 1296 4180 77 9 12 chrX 93272419 93272985 -73377311 - L1_Mus2 LINE L1 0 6566 6003 5 1296 282 288 41 0 chrX 93273000 93273080 -73377216 - B1F1 SINE Alu -75 74 15 5 1296 475 198 0 86 chrX 93273694 93273799 -73376497 + MTE2a LTR MaLR 284 379 0 5 1296 378 238 38 0 chrX 93273884 93273964 -73376332 + RSINE1 SINE B4 77 159 -6 5 1296 524 273 8 0 chrX 93273998 93274126 -73376170 - B1F SINE Alu -8 141 13 5 1296 376 328 56 46 chrX 93274126 93274193 -73376103 - ID_B1 SINE B4 -8 216 20 5 1296 223 237 0 0 chrX 93274158 93274207 -73376089 - B1F SINE Alu -18 131 83 5 1296 24 0 0 0 chrX 93274236 93274260 -73376036 + AT_rich Low_complexity Low_complexity 1 24 0 5 1296 3330 122 11 4 chrX 93274261 93274804 -73375492 + Lx2A LINE L1 6384 6930 -78 5 1296 272 319 0 42 chrX 93275314 93275361 -73374935 - BC1_Mm scRNA scRNA -38 114 2 5 1296 324 296 56 0 chrX 93275361 93275432 -73374864 - ID SINE ID -148 76 2 5 1296 207 69 0 0 chrX 93275449 93275478 -73374818 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 1296 566 279 85 15 chrX 93275481 93275681 -73374615 - B3 SINE B2 -2 214 1 5 1296 292 213 45 36 chrX 93275702 93275814 -73374482 - Lx9 LINE L1 0 7644 7532 5 1296 594 41 0 0 chrX 93275819 93275892 -73374404 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 1296 528 16 0 0 chrX 93275892 93275952 -73374344 + (GA)n Simple_repeat Simple_repeat 2 62 0 5 1296 1538 52 147 5 chrX 93275977 93276188 -73374108 - L1_Mus2 LINE L1 -7 6559 6319 5 1296 245 301 87 24 chrX 93276197 93276300 -73373996 + B4A SINE B4 155 266 -26 5 1296 483 18 0 0 chrX 93276300 93276356 -73373940 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1296 279 0 0 0 chrX 93276356 93276386 -73373910 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 1296 245 301 87 24 chrX 93276386 93276407 -73373889 + B4A SINE B4 267 286 -6 5 1296 1795 160 109 56 chrX 93276424 93276782 -73373514 + ORR1C1 LTR MaLR 1 377 -1 5 1296 451 273 97 15 chrX 93276829 93276963 -73373333 + ID_B1 SINE B4 69 213 -11 5 1296 248 340 30 10 chrX 93276979 93277080 -73373216 + PB1D7 SINE Alu 2 104 -16 5 1296 351 0 0 0 chrX 93277082 93277121 -73373175 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1296 1087 235 26 70 chrX 93277128 93277323 -73372973 - Lx9 LINE L1 -1027 6617 6440 5 1296 1477 77 0 5 chrX 93277323 93277518 -73372778 + B2_Mm2 SINE B2 2 195 0 5 1296 1087 235 26 70 chrX 93277518 93277624 -73372672 - Lx9 LINE L1 -1205 6439 6329 5 1296 213 39 0 0 chrX 93277627 93277653 -73372643 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 1296 294 29 0 0 chrX 93277653 93277687 -73372609 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1296 3386 224 77 48 chrX 93277698 93278155 -73372141 - Lx9 LINE L1 -1625 6019 5550 5 1296 1451 52 5 16 chrX 93278155 93278349 -73371947 - B2_Mm1a SINE B2 0 193 2 5 1296 3386 282 97 116 chrX 93278349 93278504 -73371792 - Lx9 LINE L1 -331 5549 5360 5 1296 411 21 0 0 chrX 93278504 93278552 -73371744 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 1296 3386 282 97 116 chrX 93278552 93278757 -73371539 - Lx9 LINE L1 -521 5359 5211 5 1296 405 65 300 100 chrX 93278757 93278877 -73371419 - B2_Mm2 SINE B2 -5 190 47 5 1296 3386 282 97 116 chrX 93278877 93278953 -73371343 - Lx9 LINE L1 -521 5210 5155 5 1296 1196 101 53 0 chrX 93278953 93279122 -73371174 - B2_Mm1t SINE B2 -14 179 2 5 1296 4935 208 89 45 chrX 93279122 93280380 -73369916 - Lx9 LINE L1 -726 5154 3844 5 1296 180 0 0 0 chrX 93280380 93280400 -73369896 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1296 4935 208 89 45 chrX 93280400 93280574 -73369722 - Lx9 LINE L1 -2001 3846 3629 5 1296 250 345 74 47 chrX 93280811 93280831 -73369465 + ID_B1 SINE B4 70 222 -2 5 1296 428 280 78 31 chrX 93280831 93280960 -73369336 + B1F SINE Alu 13 147 -2 5 1296 383 303 81 8 chrX 93281072 93281195 -73369101 + ID_B1 SINE B4 92 223 -1 5 1296 497 287 41 14 chrX 93281357 93281502 -73368794 + B1F SINE Alu 1 149 0 5 1296 253 235 43 0 chrX 93282214 93282288 -73368008 + MIRc SINE MIR 93 182 -94 5 1296 304 345 8 0 chrX 93282292 93282411 -73367885 + B1F SINE Alu 22 141 -8 5 1296 348 328 0 8 chrX 93282466 93282589 -73367707 - ID_B1 SINE B4 -3 221 100 5 1296 556 0 0 83 chrX 93283060 93283168 -73367128 + (TTCTC)n Simple_repeat Simple_repeat 4 102 0 5 1296 302 333 0 10 chrX 93283180 93283277 -73367019 - PB1D10 SINE Alu -18 99 4 5 1296 340 309 31 14 chrX 93283627 93283755 -73366541 + PB1D7 SINE Alu 16 140 -9 5 1296 441 0 0 0 chrX 93283766 93283815 -73366481 + (TC)n Simple_repeat Simple_repeat 1 49 0 5 1296 1846 215 306 30 chrX 93283823 93284359 -73365937 + Lx8 LINE L1 6471 7154 -319 5 1296 1025 232 95 11 chrX 93284359 93284642 -73365654 - MTD LTR MaLR 0 419 113 5 1296 425 248 9 38 chrX 93284644 93284749 -73365547 - RSINE1 SINE B4 -61 104 3 5 1296 25 0 0 0 chrX 93284829 93284854 -73365442 + AT_rich Low_complexity Low_complexity 1 25 0 5 1296 195 100 0 0 chrX 93284854 93284884 -73365412 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1296 378 276 10 39 chrX 93284950 93285052 -73365244 - ID_B1 SINE B4 -117 107 9 5 1296 589 290 47 0 chrX 93285073 93285242 -73365054 - B3 SINE B2 -37 179 3 5 1296 444 295 58 0 chrX 93285242 93285381 -73364915 - B1F SINE Alu 0 149 3 5 1296 470 292 2 0 chrX 93285415 93285539 -73364757 + B1F2 SINE Alu 3 128 -22 5 1296 364 305 0 0 chrX 93285552 93285647 -73364649 + B3A SINE B2 1 95 -103 5 1296 725 262 5 27 chrX 93285839 93286023 -73364273 - B3A SINE B2 -16 182 3 5 1296 199 372 62 55 chrX 93287850 93287978 -73362318 + MIR3 SINE MIR 11 139 -69 5 1296 513 303 64 25 chrX 93288508 93288711 -73361585 - B4 SINE B4 -81 211 1 5 1296 207 323 52 10 chrX 93290015 93290112 -73360184 - MIR3 SINE MIR -17 191 91 5 1296 230 250 34 101 chrX 93290463 93290552 -73359744 + B1F SINE Alu 45 127 -22 5 1296 269 109 22 0 chrX 93290712 93290758 -73359538 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 5 1296 180 77 0 0 chrX 93291265 93291291 -73359005 + (GGCTG)n Simple_repeat Simple_repeat 3 28 0 5 1296 22 0 0 0 chrX 93292848 93292870 -73357426 + AT_rich Low_complexity Low_complexity 1 22 0 5 1296 465 239 12 112 chrX 93293067 93293227 -73357069 - B1F SINE Alu -5 144 1 5 1296 265 308 75 30 chrX 93293233 93293367 -73356929 - ID_B1 SINE B4 -4 220 81 5 1296 252 341 0 32 chrX 93293578 93293672 -73356624 - PB1D10 SINE Alu -6 111 21 5 1296 654 221 139 5 chrX 93293738 93293925 -73356371 + B3 SINE B2 1 212 -4 5 1296 189 0 0 0 chrX 93294094 93294115 -73356181 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 5 1296 340 247 39 0 chrX 93294125 93294202 -73356094 - PB1D10 SINE Alu -11 106 27 5 1296 316 276 39 47 chrX 93294729 93294869 -73355427 - PB1D7 SINE Alu -1 148 11 5 1296 284 231 7 67 chrX 93294885 93294977 -73355319 - PB1D10 SINE Alu 0 120 26 5 1296 414 0 0 0 chrX 93294989 93295035 -73355261 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1296 276 245 122 9 chrX 93295037 93295144 -73355152 - RSINE1 SINE B4 -37 128 10 5 1296 481 269 8 8 chrX 93295156 93295287 -73355009 - ID_B1 SINE B4 -2 222 92 5 1296 468 191 70 3 chrX 93295557 93295657 -73354639 + B1F SINE Alu 2 107 -13 5 1296 980 124 0 0 chrX 93296519 93296656 -73353640 + B1_Mur4 SINE Alu 1 137 -13 5 1296 351 0 0 0 chrX 93296656 93296695 -73353601 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 5 1296 225 256 58 93 chrX 93296814 93296900 -73353396 - PB1D7 SINE Alu 0 120 38 5 1296 482 300 62 0 chrX 93297090 93297220 -73353076 + ID_B1 SINE B4 84 221 -3 5 1296 739 171 89 24 chrX 93297665 93297833 -73352463 - Lx5 LINE L1 -1 7049 6871 5 1296 3719 30 0 0 chrX 93297953 93298379 -73351917 + L1Md_F2 LINE L1 6145 6570 -12 5 1296 628 253 13 20 chrX 93298438 93298587 -73351709 + B1F SINE Alu 1 148 -1 5 1296 281 196 20 0 chrX 93298721 93298772 -73351524 - B1F2 SINE Alu -88 61 10 5 1296 235 283 16 48 chrX 93298772 93298784 -73351512 - B4A SINE B4 -146 146 86 5 1296 444 274 65 29 chrX 93299433 93299572 -73350724 - ID_B1 SINE B4 -4 220 77 5 1296 525 250 89 41 chrX 93299626 93299772 -73350524 - RSINE1 SINE B4 -2 163 11 5 1296 332 248 56 28 chrX 93299779 93299887 -73350409 - PB1D10 SINE Alu -1 116 6 5 1296 318 318 35 0 chrX 93300254 93300352 -73349944 - MIR SINE MIR -136 132 25 5 1296 311 253 60 0 chrX 93300446 93300529 -73349767 - PB1D7 SINE Alu 0 120 33 5 1296 423 0 0 0 chrX 93300547 93300594 -73349702 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1296 361 289 10 30 chrX 93300594 93300694 -73349602 - PB1 SINE Alu -12 115 18 6 1296 328 248 109 68 chrX 93300720 93300867 -73349429 + MIRb SINE MIR 116 268 0 6 1296 260 368 102 28 chrX 93301357 93301572 -73348724 + B4 SINE B4 48 278 -14 6 1296 318 269 115 0 chrX 93302180 93302284 -73348012 - PB1D9 SINE Alu -2 118 3 6 1296 451 88 11 42 chrX 93303173 93303268 -73347028 + (GGA)n Simple_repeat Simple_repeat 2 93 0 6 1296 950 215 54 0 chrX 93303681 93303886 -73346410 - B3 SINE B2 0 216 1 6 1296 192 277 252 19 chrX 93303897 93304000 -73346296 + MIR SINE MIR 16 142 -66 6 1296 286 301 0 0 chrX 93305357 93305430 -73344866 - B1F SINE Alu -31 118 46 6 1296 255 267 82 45 chrX 93305445 93305555 -73344741 + ID_B1 SINE B4 111 224 0 6 1296 436 238 15 96 chrX 93305745 93305880 -73344416 - ID_B1 SINE B4 -9 215 92 6 1296 269 339 129 0 chrX 93305908 93306032 -73344264 - B1F SINE Alu -8 141 2 6 1296 387 98 0 0 chrX 93306152 93306213 -73344083 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 1296 457 263 58 43 chrX 93306318 93306457 -73343839 - B1F SINE Alu -1 148 8 6 1296 735 255 6 41 chrX 93307139 93307311 -73342985 - ID_B1 SINE B4 -57 167 2 6 1296 396 255 148 27 chrX 93307535 93307622 -73342674 + ID_B1 SINE B4 5 97 -127 6 1296 342 0 0 0 chrX 93307622 93307660 -73342636 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1296 396 255 148 27 chrX 93307660 93307721 -73342575 + ID_B1 SINE B4 98 170 -54 6 1296 234 180 0 0 chrX 93307721 93307782 -73342514 + (CA)n Simple_repeat Simple_repeat 1 61 0 6 1296 242 311 139 19 chrX 93307826 93307899 -73342397 + ID_B1 SINE B4 95 166 -58 6 1296 408 55 0 0 chrX 93307899 93307954 -73342342 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1296 242 311 139 19 chrX 93307954 93307988 -73342308 + ID_B1 SINE B4 167 214 -10 6 1296 841 154 242 0 chrX 93308082 93308264 -73342032 - URR1A DNA MER1_type 0 226 1 6 1296 678 238 14 0 chrX 93309100 93309243 -73341053 - B1_Mur1 SINE Alu 0 149 5 6 1296 335 291 0 0 chrX 93309401 93309480 -73340816 - ID4_ SINE ID 0 83 5 6 1296 500 281 23 8 chrX 93309519 93309648 -73340648 - ID_B1 SINE B4 -7 217 87 6 1296 227 269 0 69 chrX 93309698 93309770 -73340526 - PB1D10 SINE Alu -30 87 21 6 1296 2777 152 142 6 chrX 93309793 93310308 -73339988 - RMER4B LTR ERVK 0 585 1 6 1296 537 58 0 0 chrX 93310338 93310407 -73339889 + (TTCC)n Simple_repeat Simple_repeat 3 71 0 6 1296 671 226 0 14 chrX 93310407 93310546 -73339750 - B1_Mur2 SINE Alu 0 149 13 6 1296 460 269 20 82 chrX 93310617 93310763 -73339533 + B1_Mur2 SINE Alu 2 138 -11 6 1296 1655 139 109 18 chrX 93310763 93311093 -73339203 - ORR1B2 LTR MaLR -7 360 1 6 1296 195 42 0 0 chrX 93311233 93311257 -73339039 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 6 1296 991 137 6 6 chrX 93311261 93311437 -73338859 + (TTCC)n Simple_repeat Simple_repeat 3 178 0 6 1296 274 278 70 53 chrX 93311443 93311557 -73338739 - PB1D10 SINE Alu -1 116 1 6 1296 21 36 0 0 chrX 93311789 93311817 -73338479 + AT_rich Low_complexity Low_complexity 1 28 0 6 1296 522 315 67 0 chrX 93311826 93311991 -73338305 - B3A SINE B2 -22 176 1 6 1296 380 324 0 7 chrX 93311999 93312136 -73338160 - ID_B1 SINE B4 0 224 89 6 1296 438 120 0 0 chrX 93313186 93313261 -73337035 + (TCCC)n Simple_repeat Simple_repeat 4 78 0 6 1296 264 217 194 11 chrX 93313262 93313355 -73336941 - PB1D10 SINE Alu -5 112 3 6 1296 376 297 97 21 chrX 93313762 93313948 -73336348 + Tigger15a DNA TcMar 516 715 0 6 1296 448 265 34 17 chrX 93314126 93314245 -73336051 - B1F1 SINE Alu -3 146 26 6 1296 344 274 23 86 chrX 93314830 93314958 -73335338 - ID_B1 SINE B4 -102 122 3 6 1296 484 277 43 28 chrX 93315739 93315880 -73334416 - ID_B1 SINE B4 -1 223 81 6 1296 2481 84 3 3 chrX 93316281 93316604 -73333692 - ORR1A2 LTR MaLR 0 327 5 6 1296 311 250 51 20 chrX 93316619 93316717 -73333579 + B1F1 SINE Alu 49 149 0 6 1296 189 311 13 13 chrX 93316942 93317017 -73333279 - MER5B DNA MER1_type -95 83 9 6 1296 275 318 57 0 chrX 93317929 93318017 -73332279 - B1F2 SINE Alu -53 96 4 6 1296 850 258 51 36 chrX 93318292 93318606 -73331690 + Lx7 LINE L1 5349 5659 -221 6 1296 1073 269 234 13 chrX 93318696 93319155 -73331141 - Lx8 LINE L1 -383 7090 6531 6 1296 713 163 94 22 chrX 93319177 93319315 -73330981 - B1_Mur2 SINE Alu 0 149 2 6 1296 389 251 216 35 chrX 93319318 93319545 -73330751 + Lx7 LINE L1 5645 5912 -1784 6 1296 604 302 26 47 chrX 93319806 93319997 -73330299 + B3A SINE B2 12 198 0 6 1296 396 104 0 0 chrX 93321679 93321746 -73328550 + (GA)n Simple_repeat Simple_repeat 2 68 0 6 1296 582 148 63 27 chrX 93321781 93321892 -73328404 - B3A SINE B2 -83 115 1 6 1296 581 189 0 9 chrX 93322948 93323055 -73327241 + RSINE1 SINE B4 12 117 -48 6 1296 414 0 0 0 chrX 93323093 93323139 -73327157 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1296 420 128 0 0 chrX 93323139 93323217 -73327079 + (GA)n Simple_repeat Simple_repeat 1 78 0 6 1297 297 0 0 0 chrX 93323526 93323559 -73326737 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1297 279 0 0 0 chrX 93325414 93325445 -73324851 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 6 1297 298 288 13 62 chrX 93329353 93329525 -73320771 + MIR3 SINE MIR 14 178 -30 6 1297 408 328 41 0 chrX 93331576 93331698 -73318598 - RSINE1 SINE B4 0 165 39 6 1297 222 179 0 0 chrX 93331752 93331808 -73318488 + CT-rich Low_complexity Low_complexity 2 57 0 6 1297 626 37 12 0 chrX 93331810 93331891 -73318405 + (TCCC)n Simple_repeat Simple_repeat 2 83 0 6 1297 490 188 116 8 chrX 93332459 93332588 -73317708 + MER2 DNA MER2_type 40 182 -163 6 1297 221 240 0 0 chrX 93332619 93332669 -73317627 - ID4 SINE ID -32 51 2 6 1297 504 279 70 0 chrX 93332669 93332827 -73317469 + MER2 DNA MER2_type 175 343 -2 6 1297 418 251 173 6 chrX 93332831 93332999 -73317297 + Charlie4a DNA MER1_type 76 271 -237 6 1297 329 324 70 39 chrX 93333037 93333323 -73316973 + Lx8 LINE L1 7179 7473 0 6 1297 468 311 9 0 chrX 93333876 93333982 -73316314 - RSINE1 SINE B4 -28 137 31 6 1297 1277 90 5 46 chrX 93334083 93334280 -73316016 - B2_Mm1t SINE B2 -3 190 2 6 1297 198 383 134 0 chrX 93334356 93334505 -73315791 + MIRb SINE MIR 46 214 -54 6 1297 232 100 20 20 chrX 93335282 93335333 -73314963 - Lx9 LINE L1 -7 7637 7587 6 1297 2205 269 63 39 chrX 93335773 93336506 -73313790 - Lx8 LINE L1 -108 7365 6602 6 1297 1088 185 47 9 chrX 93336506 93336719 -73313577 - URR1B DNA MER1_type 0 225 5 6 1297 2205 269 63 39 chrX 93336719 93336774 -73313522 - Lx8 LINE L1 -872 6601 6558 6 1297 449 294 8 45 chrX 93337635 93337654 -73312642 - ID_B1 SINE B4 -13 211 148 6 1297 457 237 31 0 chrX 93337654 93337751 -73312545 - B1F SINE Alu -32 117 18 6 1297 449 294 8 45 chrX 93337751 93337767 -73312529 - ID_B1 SINE B4 -13 147 85 6 1297 1260 34 0 0 chrX 93337894 93338040 -73312256 - B1_Mus2 SINE Alu 0 147 2 6 1297 249 297 24 112 chrX 93338593 93338718 -73311578 + MIR SINE MIR 31 144 -64 6 1297 247 250 73 0 chrX 93339594 93339662 -73310634 - MIRb SINE MIR -7 261 189 6 1297 462 240 100 69 chrX 93339678 93339808 -73310488 + ID_B1 SINE B4 81 214 -10 6 1297 238 204 0 0 chrX 93339835 93339889 -73310407 + L1MA8 LINE L1 6061 6114 -177 6 1297 1235 28 7 0 chrX 93339909 93340054 -73310242 - B1_Mm SINE Alu 0 147 2 6 1297 508 182 58 14 chrX 93340733 93340872 -73309424 - Lx9 LINE L1 -6 7638 7494 6 1297 307 304 85 30 chrX 93341023 93341192 -73309104 - MIRc SINE MIR -74 194 12 6 1297 566 195 143 38 chrX 93341776 93341909 -73308387 - B1_Mm SINE Alu 0 147 1 6 1297 1338 257 56 12 chrX 93342093 93342503 -73307793 - Lx8 LINE L1 -269 7204 6777 6 1297 387 0 0 0 chrX 93344483 93344526 -73305770 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 6 1297 746 312 74 12 chrX 93344753 93344996 -73305300 + MER21B LTR ERV1 208 465 -398 6 1297 431 217 76 34 chrX 93345006 93345125 -73305171 - B1_Mur1 SINE Alu -1 148 25 6 1297 618 240 15 44 chrX 93345137 93345272 -73305024 - ID_B1 SINE B4 -7 217 87 6 1297 420 323 68 34 chrX 93345439 93345644 -73304652 + MIRb SINE MIR 28 239 -29 6 1297 497 277 17 0 chrX 93346325 93346444 -73303852 - ID_B1 SINE B4 -1 223 103 6 1297 23 54 0 0 chrX 93346793 93346830 -73303466 + AT_rich Low_complexity Low_complexity 1 37 0 6 1297 692 259 47 5 chrX 93347130 93347320 -73302976 + B3A SINE B2 1 198 0 6 1297 1151 51 0 0 chrX 93347546 93347684 -73302612 + B1_Mm SINE Alu 1 138 -9 6 1297 252 59 0 0 chrX 93347684 93347718 -73302578 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 6 1297 214 385 44 37 chrX 93348539 93348674 -73301622 - MIRc SINE MIR -49 219 84 6 1297 238 26 51 0 chrX 93349183 93349222 -73301074 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 6 1297 452 180 22 109 chrX 93349222 93349336 -73300960 + B1_Mur2 SINE Alu 25 131 -18 6 1297 219 69 0 0 chrX 93349336 93349365 -73300931 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 6 1297 452 180 22 109 chrX 93349365 93349387 -73300909 + B1_Mur2 SINE Alu 132 149 0 6 1297 225 0 0 0 chrX 93350023 93350048 -73300248 + (TC)n Simple_repeat Simple_repeat 2 26 0 6 1297 402 21 0 0 chrX 93350048 93350094 -73300202 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1297 545 254 52 15 chrX 93350121 93350257 -73300039 - RSINE1 SINE B4 -22 143 3 6 1297 275 290 151 0 chrX 93350263 93350356 -73299940 - PB1D10 SINE Alu -5 112 6 6 1297 1098 129 11 5 chrX 93351173 93351360 -73298936 - L1_Mus3 LINE L1 -2 6636 6449 7 1297 395 331 36 0 chrX 93351502 93351641 -73298655 + MER33 DNA MER1_type 2 145 -179 7 1297 504 371 36 72 chrX 93351633 93351996 -73298300 - ORR1E LTR MaLR -4 355 6 7 1297 533 300 0 51 chrX 93351998 93352100 -73298196 + ID_B1 SINE B4 84 180 -44 7 1297 1925 156 134 8 chrX 93352100 93352474 -73297822 - MTC LTR MaLR 0 421 1 7 1297 533 300 0 51 chrX 93352474 93352508 -73297788 + ID_B1 SINE B4 181 213 -11 7 1297 23 33 0 0 chrX 93352548 93352578 -73297718 + AT_rich Low_complexity Low_complexity 1 30 0 7 1297 206 154 0 71 chrX 93353634 93353676 -73296620 - MIRb SINE MIR -186 82 44 7 1297 369 0 0 0 chrX 93353699 93353740 -73296556 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 7 1297 1094 50 7 0 chrX 93353740 93353879 -73296417 - B1_Mus1 SINE Alu -3 145 6 7 1297 448 212 8 85 chrX 93353782 93353911 -73296385 - MT2B LTR ERVL -344 257 139 7 1297 266 333 13 0 chrX 93353880 93353955 -73296341 - B1F2 SINE Alu -69 80 5 7 1297 28 29 0 0 chrX 93353968 93354003 -73296293 + AT_rich Low_complexity Low_complexity 1 35 0 7 1297 492 304 53 13 chrX 93354919 93355069 -73295227 - RSINE1 SINE B4 -8 157 2 7 1297 281 365 31 37 chrX 93355094 93355256 -73295040 + MIRm SINE MIR 3 163 -113 7 1297 180 0 0 0 chrX 93355323 93355343 -73294953 + (TTA)n Simple_repeat Simple_repeat 2 21 0 7 1297 742 252 118 32 chrX 93356065 93356405 -73293891 + L1MB5 LINE L1 5345 5713 -471 7 1297 632 272 0 101 chrX 93356499 93356716 -73293580 - B3A SINE B2 -2 196 2 7 1297 298 318 137 85 chrX 93356724 93357112 -73293184 - MLT1A1 LTR MaLR 0 408 1 7 1297 358 266 115 42 chrX 93357132 93357240 -73293056 + L1MB5 LINE L1 5838 5957 -217 7 1297 465 19 0 0 chrX 93357240 93357294 -73293002 + (CA)n Simple_repeat Simple_repeat 2 55 0 7 1297 358 266 115 42 chrX 93357294 93357350 -73292946 + L1MB5 LINE L1 5958 6014 -160 7 1297 278 163 3 111 chrX 93357392 93357469 -73292827 + PB1D9 SINE Alu 50 120 0 7 1297 203 176 0 38 chrX 93357518 93357571 -73292725 + (CATA)n Simple_repeat Simple_repeat 4 54 0 7 1297 245 355 0 0 chrX 93357615 93357677 -73292619 - ID4_ SINE ID -20 63 2 7 1297 297 248 224 19 chrX 93357832 93357939 -73292357 - L2a LINE L2 -71 3355 3227 7 1297 766 238 53 34 chrX 93358006 93358195 -73292101 + B3 SINE B2 1 187 -29 7 1297 207 0 0 0 chrX 93358195 93358218 -73292078 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1297 766 238 53 34 chrX 93358218 93358237 -73292059 + B3 SINE B2 188 213 -3 7 1297 294 273 0 26 chrX 93358714 93358827 -73291469 + GA-rich Low_complexity Low_complexity 1 110 0 7 1297 870 95 0 0 chrX 93359534 93359660 -73290636 + (TTCCC)n Simple_repeat Simple_repeat 1 126 0 7 1297 1031 69 14 0 chrX 93359660 93359804 -73290492 + (TTTC)n Simple_repeat Simple_repeat 2 147 0 7 1297 1294 90 17 0 chrX 93360288 93360465 -73289831 + B2_Mm2 SINE B2 1 180 -15 7 1297 240 111 0 0 chrX 93360466 93360502 -73289794 + (GGGAGA)n Simple_repeat Simple_repeat 2 37 0 7 1297 1618 66 39 4 chrX 93360917 93361146 -73289150 - L1_Mus3 LINE L1 -6 6632 6396 7 1297 940 155 165 5 chrX 93364180 93364374 -73285922 + URR1B DNA MER1_type 1 225 0 7 1297 327 313 36 0 chrX 93364481 93364564 -73285732 - B1F2 SINE Alu -61 88 3 7 1297 212 267 0 0 chrX 93364791 93364836 -73285460 - MIRb SINE MIR -103 165 121 7 1297 248 224 86 62 chrX 93365013 93365094 -73285202 + PB1 SINE Alu 45 127 0 7 1297 312 337 39 19 chrX 93365128 93365231 -73285065 + B1F1 SINE Alu 1 105 -44 7 1297 298 386 0 9 chrX 93365231 93365243 -73285053 + ID_B1 SINE B4 82 195 -29 7 1297 887 96 8 0 chrX 93365246 93365371 -73284925 - B1_Mus1 SINE Alu 0 148 23 7 1297 288 290 0 28 chrX 93365520 93365591 -73284705 + ID4_ SINE ID 2 70 -13 7 1297 589 264 21 14 chrX 93365862 93366004 -73284292 - B1F SINE Alu -1 148 6 7 1297 251 254 0 0 chrX 93366073 93366136 -73284160 + L1MD1 LINE L1 5929 5991 -251 7 1297 720 238 140 5 chrX 93366468 93366654 -73283642 - B3 SINE B2 -5 211 1 7 1297 243 308 74 6 chrX 93366876 93367046 -73283250 + L1M5 LINE L1 5730 5915 -247 7 1297 382 226 95 21 chrX 93368603 93368698 -73281598 + PB1D10 SINE Alu 1 102 -15 7 1297 564 196 18 0 chrX 93369138 93369250 -73281046 + PB1D9 SINE Alu 1 114 -6 7 1297 363 210 70 0 chrX 93369390 93369490 -73280806 + L1M4 LINE L1 5589 5695 -489 7 1297 220 314 0 0 chrX 93369494 93369545 -73280751 + ID2 SINE ID 31 81 -2 7 1297 308 294 33 0 chrX 93369623 93369715 -73280581 - MTD LTR MaLR -324 95 1 7 1297 300 279 220 5 chrX 93369715 93369905 -73280391 + Lx8 LINE L1 5439 5644 -236 7 1297 370 276 42 7 chrX 93369917 93370059 -73280237 + Lx8 LINE L1 5716 5896 -1577 7 1297 1948 295 65 43 chrX 93370482 93372704 -73277592 + Lx9 LINE L1 4986 7377 -267 7 1297 3112 30 0 5 chrX 93372704 93373077 -73277219 + L1Md_F2 LINE L1 6200 6570 -12 7 1297 1948 301 119 32 chrX 93373077 93373198 -73277098 + Lx9 LINE L1 7378 7493 -151 7 1297 339 65 0 0 chrX 93373200 93373246 -73277050 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1297 592 136 16 0 chrX 93373246 93373371 -73276925 + GA-rich Low_complexity Low_complexity 1 127 0 7 1297 373 344 100 53 chrX 93373859 93374200 -73276096 - ORR1E LTR MaLR -2 357 1 7 1297 387 0 0 0 chrX 93374356 93374399 -73275897 + (TC)n Simple_repeat Simple_repeat 2 44 0 7 1297 216 0 0 0 chrX 93374399 93374422 -73275874 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 1297 1001 144 194 0 chrX 93374548 93374728 -73275568 - B3 SINE B2 0 216 2 7 1297 423 345 12 29 chrX 93375631 93375801 -73274495 + MamRep1879 DNA hAT? 8 174 -42 7 1297 1566 279 51 41 chrX 93376036 93376642 -73273654 + Lx8 LINE L1 6860 7471 -2 7 1297 501 308 76 14 chrX 93376723 93376868 -73273428 + RSINE1 SINE B4 1 154 -11 7 1297 384 22 0 0 chrX 93376959 93377004 -73273292 + (GA)n Simple_repeat Simple_repeat 1 45 0 7 1297 280 207 35 0 chrX 93377291 93377349 -73272947 - MIR SINE MIR -112 150 91 7 1297 397 311 105 16 chrX 93377486 93377610 -73272686 - B1F1 SINE Alu -6 143 9 7 1297 315 319 69 13 chrX 93377616 93377775 -73272521 - MIR SINE MIR -48 214 47 7 1297 692 212 22 7 chrX 93377826 93377964 -73272332 - B1_Mur3 SINE Alu -9 140 1 7 1297 195 42 0 0 chrX 93378315 93378339 -73271957 + (TC)n Simple_repeat Simple_repeat 2 25 0 7 1297 308 223 105 97 chrX 93378669 93378685 -73271611 - PB1D10 SINE Alu 0 117 3 7 1297 365 233 20 82 chrX 93378685 93378783 -73271513 - ID_B1 SINE B4 -49 175 84 7 1297 720 33 0 0 chrX 93379487 93379578 -73270718 + (CA)n Simple_repeat Simple_repeat 2 92 0 7 1297 753 274 184 13 chrX 93380033 93380418 -73269878 - Lx9 LINE L1 -7 7637 7187 7 1297 1124 100 94 0 chrX 93380487 93380657 -73269639 - B2_Mm2 SINE B2 -9 186 1 7 1297 211 136 0 22 chrX 93380680 93380725 -73269571 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 7 1297 1146 48 0 20 chrX 93380725 93380873 -73269423 - B1_Mus1 SINE Alu -1 147 3 7 1297 3139 45 0 0 chrX 93381247 93381643 -73268653 - L1Md_F2 LINE L1 -186 5697 5302 7 1297 7071 50 2 2 chrX 93381643 93382524 -73267772 + L1Md_F2 LINE L1 5701 6581 -1 7 1297 763 305 135 37 chrX 93382930 93383308 -73266988 - MTD LTR MaLR 0 419 5 7 1297 2264 43 0 0 chrX 93383435 93383711 -73266585 + L1Md_A LINE L1 6307 6582 0 7 1297 4493 55 0 0 chrX 93383865 93384410 -73265886 + L1_Mus1 LINE L1 6023 6567 0 7 1297 1306 175 153 11 chrX 93384454 93384592 -73265704 - Lx9 LINE L1 -1 7643 7477 7 1297 519 123 0 0 chrX 93384592 93384673 -73265623 + (TA)n Simple_repeat Simple_repeat 2 82 0 7 1297 1306 175 153 11 chrX 93384673 93384886 -73265410 - Lx9 LINE L1 -168 7476 7242 7 1297 1483 212 14 48 chrX 93384880 93385091 -73265205 - Lx9 LINE L1 -636 7008 6811 7 1297 282 56 0 0 chrX 93385091 93385127 -73265169 + (CAT)n Simple_repeat Simple_repeat 2 37 0 7 1297 1882 125 56 3 chrX 93385127 93385431 -73264865 - Lx4A LINE L1 -10 7048 6729 7 1297 1483 212 14 48 chrX 93385431 93385575 -73264721 - Lx9 LINE L1 -834 6810 6665 7 1297 398 219 297 124 chrX 93385579 93385943 -73264353 - Lx9 LINE L1 -1083 6561 6135 7 1297 319 284 0 52 chrX 93385936 93386051 -73264245 - Lx9 LINE L1 -1674 5970 5862 7 1297 258 100 0 0 chrX 93386051 93386073 -73264223 + (T)n Simple_repeat Simple_repeat 1 22 0 7 1297 1161 74 0 0 chrX 93386073 93386221 -73264075 - B1_Mus1 SINE Alu 0 148 1 7 1297 258 100 0 0 chrX 93386221 93386238 -73264058 + (T)n Simple_repeat Simple_repeat 1 17 0 7 1297 1549 221 173 30 chrX 93386238 93386778 -73263518 - Lx9 LINE L1 -11 5836 5251 7 1297 2405 17 0 0 chrX 93386830 93387117 -73263179 + L1Md_T LINE L1 5299 5585 -298 7 1297 8420 33 0 1 chrX 93387118 93388114 -73262182 + L1Md_T LINE L1 5587 6581 -1 7 1297 1011 236 0 29 chrX 93388117 93388322 -73261974 - URR1B DNA MER1_type -26 199 1 7 1297 225 196 34 51 chrX 93388322 93388381 -73261915 - L1_Rod LINE L1 -6564 608 551 7 1297 843 26 26 0 chrX 93388440 93388554 -73261742 + (TC)n Simple_repeat Simple_repeat 2 118 0 7 1297 231 188 0 0 chrX 93388568 93388616 -73261680 - L1_Mur1 LINE L1 -1306 4580 4533 7 1297 1894 248 67 20 chrX 93388636 93389343 -73260953 - Lx9 LINE L1 -1447 4400 3661 7 1297 1261 96 17 80 chrX 93389985 93390224 -73260072 - Lx LINE L1 -2 6652 6429 7 1297 567 0 0 0 chrX 93390230 93390293 -73260003 + (TTC)n Simple_repeat Simple_repeat 2 64 0 7 1297 270 139 0 0 chrX 93390307 93390350 -73259946 - MT2A LTR ERVL -2 531 489 7 1297 1134 238 20 48 chrX 93390356 93390676 -73259620 - Lx9 LINE L1 -4382 1465 1149 7 1297 1134 89 0 0 chrX 93390676 93390822 -73259474 - B1_Mus1 SINE Alu -1 147 2 7 1297 1134 224 18 57 chrX 93390822 93390903 -73259393 - Lx9 LINE L1 -6460 1148 1070 7 1297 738 163 124 75 chrX 93390903 93391089 -73259207 - B2_Mm2 SINE B2 0 195 1 7 1297 1134 224 18 57 chrX 93391089 93391181 -73259115 - Lx9 LINE L1 -6539 1069 989 7 1297 1338 252 13 62 chrX 93391667 93392056 -73258240 + ORR1D2 LTR MaLR 1 370 0 7 1297 966 118 0 0 chrX 93392596 93392732 -73257564 - B2_Mm2 SINE B2 -56 139 4 7 1297 1422 336 63 41 chrX 93393055 93393979 -73256317 - Lx8 LINE L1 -166 7307 6364 7 1297 745 308 67 0 chrX 93394073 93394098 -73256198 - B3 SINE B2 0 216 192 7 1297 183 129 0 0 chrX 93394098 93394129 -73256167 + (TATG)n Simple_repeat Simple_repeat 4 34 0 7 1297 745 308 67 0 chrX 93394129 93394298 -73255998 - B3 SINE B2 -25 191 10 7 1297 7754 42 5 0 chrX 93394649 93395588 -73254708 + L1Md_F2 LINE L1 5639 6582 0 7 1297 258 32 0 0 chrX 93395616 93395647 -73254649 + (A)n Simple_repeat Simple_repeat 1 31 0 8 1297 3389 76 2 0 chrX 93396090 93396550 -73253746 - L1_Mm LINE L1 -7 5876 5416 8 1297 811 76 0 0 chrX 93396550 93396669 -73253627 + L1_Mus2 LINE L1 6447 6565 -1 8 1297 1418 62 5 25 chrX 93396692 93396890 -73253406 + B2_Mm2 SINE B2 2 195 0 8 1297 1189 261 135 10 chrX 93396901 93397315 -73252981 - Lx8 LINE L1 -2 7471 7006 8 1297 244 252 91 45 chrX 93397706 93397913 -73252383 - L1MD2 LINE L1 -17 6167 5948 8 1297 1219 275 21 7 chrX 93397939 93398225 -73252071 - MTEb LTR MaLR -87 292 3 8 1297 2074 292 175 13 chrX 93398227 93398589 -73251707 - MTEb-int LTR MaLR 0 1580 1156 8 1297 1863 215 110 54 chrX 93398589 93399091 -73251205 + MT2A LTR ERVL 1 530 -3 8 1297 2074 292 175 13 chrX 93399091 93399499 -73250797 - MTEb-int LTR MaLR -425 1155 685 8 1297 245 259 46 144 chrX 93399528 93399633 -73250663 - MTEb-int LTR MaLR -973 607 516 8 1297 1304 98 27 0 chrX 93399633 93399817 -73250479 - B2_Mm1t SINE B2 -3 190 2 8 1297 245 259 46 144 chrX 93399817 93399905 -73250391 - MTEb-int LTR MaLR -1065 515 433 8 1297 232 245 0 0 chrX 93399885 93399938 -73250358 - MTEa LTR MaLR -326 53 1 8 1297 293 185 77 0 chrX 93400180 93400245 -73250051 + L1MA4 LINE L1 5706 5775 -525 8 1297 272 127 18 0 chrX 93400245 93400300 -73249996 + (TC)n Simple_repeat Simple_repeat 2 57 0 8 1297 439 262 105 23 chrX 93400300 93400472 -73249824 + L1MA4 LINE L1 5792 5977 -206 8 1297 3486 58 0 9 chrX 93400726 93401175 -73249121 + L1_Mus1 LINE L1 6122 6566 -1 8 1297 238 316 14 42 chrX 93401982 93402124 -73248172 + Lx9 LINE L1 900 1037 -6571 8 1297 285 53 0 51 chrX 93402126 93402185 -73248111 + (CAAAA)n Simple_repeat Simple_repeat 2 57 0 8 1297 1533 234 172 31 chrX 93402204 93403172 -73247124 + Lx9 LINE L1 1071 2190 -3657 8 1297 2578 141 9 14 chrX 93403178 93403618 -73246678 + Lx4B LINE L1 6503 6940 -118 8 1297 2173 231 56 62 chrX 93403657 93403806 -73246490 + Lx9 LINE L1 2198 2330 -3517 8 1297 1025 95 7 0 chrX 93403806 93403953 -73246343 - B1_Mus1 SINE Alu 0 148 1 8 1297 2173 231 56 62 chrX 93403953 93404757 -73245539 + Lx9 LINE L1 2331 3145 -2702 8 1297 3291 104 15 2 chrX 93404754 93405348 -73244948 - Lx2 LINE L1 -1049 5948 5350 8 1297 4278 145 7 27 chrX 93405348 93406077 -73244219 + Lx LINE L1 5935 6648 -6 8 1297 284 202 38 12 chrX 93406080 93406160 -73244136 + Lx9 LINE L1 3137 3218 -2629 8 1297 2787 288 82 41 chrX 93406154 93407983 -73242313 + Lx9 LINE L1 5402 7438 -206 8 1297 405 58 0 0 chrX 93408870 93408922 -73241374 + (TG)n Simple_repeat Simple_repeat 1 52 0 8 1297 270 0 0 0 chrX 93408922 93408951 -73241345 + (GA)n Simple_repeat Simple_repeat 1 30 0 8 1297 1186 68 0 0 chrX 93409997 93410145 -73240151 + B1_Mus1 SINE Alu 1 148 0 8 1297 4888 75 0 44 chrX 93410493 93411246 -73239050 - Lx3_Mus LINE L1 -568 6441 5722 8 1297 4054 74 11 2 chrX 93411247 93411785 -73238511 + Lx3_Mus LINE L1 6459 7001 -8 8 1297 1020 295 38 55 chrX 93411791 93412157 -73238139 - MLT1B LTR MaLR -25 365 6 8 1297 186 345 47 12 chrX 93413771 93413856 -73236440 - MIRc SINE MIR -51 217 130 8 1297 689 280 20 36 chrX 93414247 93414443 -73235853 - B3A SINE B2 -3 213 21 8 1297 605 273 65 11 chrX 93414469 93414654 -73235642 - B3A SINE B2 0 198 4 8 1297 1016 90 0 35 chrX 93415094 93415267 -73235029 + Lx LINE L1 6488 6654 0 8 1297 251 319 16 25 chrX 93415353 93415475 -73234821 + GA-rich Low_complexity Low_complexity 5 125 0 8 1297 3288 43 9 0 chrX 93415822 93416243 -73234053 - L1_Mus2 LINE L1 -515 6051 5627 8 1297 3611 72 48 8 chrX 93416243 93416747 -73233549 + L1_Mus2 LINE L1 6043 6566 0 8 1297 277 323 29 39 chrX 93416974 93417077 -73233219 - PB1D7 SINE Alu 0 120 19 8 1297 3518 104 8 13 chrX 93418446 93418971 -73231325 + Lx2B LINE L1 6479 7000 0 8 1297 2946 52 68 0 chrX 93420552 93420935 -73229361 - L1_Mus1 LINE L1 0 6567 6159 8 1297 26 0 0 0 chrX 93421269 93421295 -73229001 + AT_rich Low_complexity Low_complexity 1 26 0 8 1297 21 71 0 0 chrX 93421392 93421434 -73228862 + AT_rich Low_complexity Low_complexity 1 42 0 8 1297 388 321 35 12 chrX 93422763 93422967 -73227329 + MIRb SINE MIR 51 265 -3 8 1297 53 40 0 0 chrX 93423530 93423604 -73226692 + AT_rich Low_complexity Low_complexity 1 74 0 8 1297 429 20 0 0 chrX 93423980 93424030 -73226266 + (TATG)n Simple_repeat Simple_repeat 2 51 0 8 1297 191 375 11 11 chrX 93424031 93424120 -73226176 - MIR SINE MIR -78 130 42 8 1297 539 273 55 50 chrX 93424578 93424759 -73225537 - B3A SINE B2 -16 182 1 8 1297 278 284 37 0 chrX 93424766 93424847 -73225449 + L2b LINE L2 3287 3370 -5 8 1297 1524 238 12 9 chrX 93424887 93425209 -73225087 - MTD LTR MaLR -5 414 92 8 1297 3461 209 141 52 chrX 93425231 93426200 -73224096 + MTD-int LTR MaLR 33 1088 -170 8 1297 552 254 52 0 chrX 93426409 93426543 -73223753 + ID_B1 SINE B4 81 221 -3 8 1297 741 224 36 15 chrX 93426582 93426777 -73223519 + MTD-int LTR MaLR 1060 1258 0 8 1297 1912 221 19 17 chrX 93426777 93427187 -73223109 + MTD LTR MaLR 1 411 -8 8 1297 250 260 65 52 chrX 93427187 93427264 -73223032 - MTD LTR MaLR -338 83 6 8 1297 381 22 0 0 chrX 93427494 93427540 -73222756 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1297 342 233 87 0 chrX 93427605 93427708 -73222588 - L1MA8 LINE L1 -380 5911 5800 8 1297 609 277 0 7 chrX 93427765 93427914 -73222382 + Lx8 LINE L1 7174 7321 -152 8 1297 510 131 0 0 chrX 93427916 93428015 -73222281 + (GA)n Simple_repeat Simple_repeat 2 100 0 8 1297 8070 40 3 5 chrX 93428196 93429174 -73221122 + L1Md_F2 LINE L1 5606 6581 -1 8 1297 23 0 0 0 chrX 93429374 93429397 -73220899 + AT_rich Low_complexity Low_complexity 1 23 0 8 1297 3783 45 38 16 chrX 93429402 93429897 -73220399 - L1Md_F2 LINE L1 -13 6569 6064 8 1297 329 289 0 47 chrX 93429904 93430043 -73220253 - BC1_Mm scRNA scRNA -18 134 2 8 1297 182 260 60 0 chrX 93430263 93430313 -73219983 + MIRb SINE MIR 40 92 -176 8 1297 21 0 0 0 chrX 93430422 93430443 -73219853 + AT_rich Low_complexity Low_complexity 1 21 0 8 1297 600 14 0 0 chrX 93430508 93430577 -73219719 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 8 1297 768 147 75 30 chrX 93430836 93430969 -73219327 + B1_Mus2 SINE Alu 9 147 0 8 1297 181 283 0 130 chrX 93431981 93432050 -73218246 - MIRc SINE MIR -165 103 44 8 1297 310 288 77 39 chrX 93432263 93432393 -73217903 + B1F SINE Alu 3 137 -12 8 1297 252 86 0 0 chrX 93432394 93432429 -73217867 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 1297 2767 60 5 80 chrX 93433917 93434330 -73215966 - L1_Mus2 LINE L1 0 6566 6185 8 1297 208 267 184 19 chrX 93435948 93436051 -73214245 - MIRm SINE MIR -132 144 25 8 1297 250 306 36 36 chrX 93437112 93437224 -73213072 + MIR3 SINE MIR 60 171 -37 8 1297 255 333 0 0 chrX 93437405 93437474 -73212822 - ID4 SINE ID -10 73 5 8 1297 242 372 18 0 chrX 93437489 93437602 -73212694 - PB1D10 SINE Alu -2 115 1 8 1297 367 366 99 0 chrX 93437604 93437795 -73212501 - MIRb SINE MIR -8 260 51 8 1297 24 0 0 0 chrX 93438949 93438973 -73211323 + AT_rich Low_complexity Low_complexity 1 24 0 8 1297 344 353 19 51 chrX 93439607 93439765 -73210531 + MIR3 SINE MIR 17 169 -39 8 1297 23 0 0 0 chrX 93440531 93440554 -73209742 + AT_rich Low_complexity Low_complexity 1 23 0 8 1297 294 300 72 11 chrX 93440903 93441011 -73209285 + B1F SINE Alu 1 114 -35 8 1297 216 242 15 0 chrX 93441032 93441047 -73209249 + A-rich Low_complexity Low_complexity 4 18 0 8 1297 4964 50 33 0 chrX 93441047 93441731 -73208565 + L1Md_F3 LINE L1 5916 6584 0 8 1297 312 51 0 0 chrX 93441796 93441835 -73208461 + L1_Mus1 LINE L1 6212 6250 -317 8 1297 1363 46 6 0 chrX 93441835 93442010 -73208286 + L1Md_T LINE L1 6407 6582 0 8 1297 2093 67 104 0 chrX 93442008 93442307 -73207989 + L1_Mus1 LINE L1 6237 6566 -1 8 1297 297 0 0 0 chrX 93442323 93442356 -73207940 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1297 450 0 0 0 chrX 93442356 93442405 -73207891 + (GA)n Simple_repeat Simple_repeat 2 51 0 8 1297 1987 258 94 73 chrX 93445362 93446290 -73204006 + Lx8 LINE L1 6525 7471 -2 8 1297 512 283 9 0 chrX 93446354 93446467 -73203829 + B1_Mur2 SINE Alu 12 125 -24 8 1297 1268 194 4 0 chrX 93447429 93447676 -73202620 + L1VL4 LINE L1 504 751 -5551 8 1297 1561 219 39 8 chrX 93447672 93448031 -73202265 + Lx3C LINE L1 6605 6974 -2 8 1297 7520 67 14 1 chrX 93448045 93448981 -73201315 - L1_Mm LINE L1 -745 5138 4192 8 1297 324 0 0 0 chrX 93448981 93449017 -73201279 + (TA)n Simple_repeat Simple_repeat 2 37 0 8 1297 7520 67 14 1 chrX 93449017 93449138 -73201158 - L1_Mm LINE L1 -1692 4191 4068 8 1297 3225 62 0 0 chrX 93449138 93449560 -73200736 + L1Md_F2 LINE L1 5175 5596 -287 8 1297 7968 55 0 4 chrX 93449560 93450559 -73199737 + L1Md_F2 LINE L1 5588 6582 0 8 1297 405 0 0 0 chrX 93450642 93450687 -73199609 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1297 742 303 116 31 chrX 93450953 93451212 -73199084 + MTEa LTR MaLR 99 379 0 8 1297 925 344 46 38 chrX 93451288 93451784 -73198512 + MLT1D LTR MaLR 6 505 0 8 1297 712 308 35 28 chrX 93452066 93452350 -73197946 + B4A SINE B4 1 286 -6 8 1297 548 53 13 0 chrX 93452394 93452470 -73197826 + (CA)n Simple_repeat Simple_repeat 2 78 0 8 1297 1716 131 41 0 chrX 93452497 93452765 -73197531 + RMER19A LTR ERVK 1 279 -458 8 1297 750 204 21 57 chrX 93452763 93452955 -73197341 + ORR1D-int LTR MaLR 1020 1204 -166 8 1297 2652 135 53 38 chrX 93452961 93453431 -73196865 - Lx2 LINE L1 0 6997 6521 8 162 33314 54 23 7 chrX 93453486 93459559 -73190737 - L1Md_F3 LINE L1 -1 6583 413 8 1298 9568 63 1 1 chrX 93459594 93460902 -73189394 - L1Md_F2 LINE L1 -498 5385 4077 8 1298 1338 68 0 0 chrX 93460898 93461074 -73189222 + L1Md_F2 LINE L1 5411 5586 -297 8 1298 8042 49 2 0 chrX 93461074 93462056 -73188240 + L1Md_F2 LINE L1 5587 6570 -12 8 1298 1003 253 146 16 chrX 93462231 93462552 -73187744 - ORR1D2 LTR MaLR -7 363 1 8 1298 2037 272 40 57 chrX 93462552 93463132 -73187164 - ORR1D2-int LTR MaLR 0 1370 801 8 1298 251 297 42 8 chrX 93463150 93463269 -73187027 - L1M2 LINE L1 -4344 2505 2383 8 1298 245 349 0 0 chrX 93463659 93463725 -73186571 + ID4_ SINE ID 18 83 0 8 1298 2777 173 2 12 chrX 93465351 93465843 -73184453 + Lx LINE L1 6164 6650 -4 8 1298 338 319 98 27 chrX 93465855 93465875 -73184421 + L1M4 LINE L1 13 38 -6504 8 1298 192 40 0 0 chrX 93465875 93465900 -73184396 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 1298 338 319 98 27 chrX 93465900 93466063 -73184233 + L1M4 LINE L1 39 208 -6334 8 1298 370 320 135 50 chrX 93466113 93466373 -73183923 + L1M4 LINE L1 328 609 -5933 8 1298 426 261 54 0 chrX 93466559 93466689 -73183607 + L1M4 LINE L1 814 950 -5592 8 1298 3496 191 35 7 chrX 93466759 93467498 -73182798 + L1VL2 LINE L1 65 824 -5511 8 1298 29703 94 16 15 chrX 93467516 93473071 -73177225 + L1Md_F2 LINE L1 31 5586 -297 8 1298 8151 49 1 4 chrX 93473071 93474067 -73176229 + L1Md_F2 LINE L1 5587 6579 -3 8 1298 21278 115 12 14 chrX 93474067 93475338 -73174958 + L1_Mus3 LINE L1 5527 6638 0 9 1298 190 250 0 0 chrX 93475628 93475668 -73174628 - L3 LINE CR1 -1911 2578 2539 9 1298 1177 216 95 8 chrX 93475857 93476109 -73174187 - MTD LTR MaLR 0 419 146 9 1298 681 286 18 12 chrX 93476238 93476408 -73173888 + B3 SINE B2 5 175 -41 9 1298 1152 254 21 42 chrX 93476408 93476696 -73173600 + ORR1D1 LTR MaLR 1 282 -92 9 1298 379 229 101 0 chrX 93476715 93476824 -73173472 + Lx2B LINE L1 6877 6996 -4 9 1298 2496 46 0 0 chrX 93476826 93477129 -73173167 + L1Md_T LINE L1 6280 6582 0 9 1298 29818 87 13 15 chrX 93477150 93482580 -73167716 + L1Md_F LINE L1 168 5587 -296 9 1298 7683 67 1 2 chrX 93482580 93483564 -73166732 + L1Md_F2 LINE L1 5588 6570 -12 9 1298 29818 82 4 18 chrX 93483564 93483576 -73166720 + L1Md_F LINE L1 5588 5599 -284 9 1298 271 192 141 0 chrX 93483582 93483660 -73166636 + ORR1D1 LTR MaLR 286 374 0 9 1298 268 269 0 31 chrX 93483764 93483860 -73166436 + L1M4 LINE L1 3468 3560 -2586 9 1298 237 278 0 0 chrX 93483918 93483990 -73166306 + L1M4 LINE L1 5135 5206 -940 9 1298 837 265 19 10 chrX 93483996 93484202 -73166094 + B3 SINE B2 3 210 -6 9 1298 649 296 77 24 chrX 93484366 93484857 -73165439 + L1M2 LINE L1 4702 5218 -925 9 1298 303 122 0 0 chrX 93485244 93485293 -73165003 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 9 1298 1079 97 14 0 chrX 93485294 93485439 -73164857 - B1_Mus1 SINE Alu -1 147 1 9 1298 197 281 79 79 chrX 93486414 93486503 -73163793 + MIR3 SINE MIR 86 174 -34 9 1298 285 224 47 0 chrX 93486513 93486598 -73163698 + (TA)n Simple_repeat Simple_repeat 2 90 0 9 1298 180 152 0 0 chrX 93486898 93486931 -73163365 + T-rich Low_complexity Low_complexity 1 33 0 9 1298 341 296 16 23 chrX 93487846 93487974 -73162322 + L3 LINE CR1 4099 4225 -264 9 1298 576 272 0 0 chrX 93488097 93488233 -73162063 - B1_Mur2 SINE Alu -13 136 1 9 1298 210 348 43 0 chrX 93489460 93489529 -73160767 + MIRc SINE MIR 91 162 -106 9 1298 24 0 0 0 chrX 93489832 93489856 -73160440 + AT_rich Low_complexity Low_complexity 1 24 0 9 1298 182 362 0 68 chrX 93490185 93490259 -73160037 - MIRb SINE MIR -175 93 25 9 1298 1955 152 33 126 chrX 93490631 93491053 -73159243 - RMER19B LTR ERVK -519 383 1 9 1298 1058 234 5 10 chrX 93491241 93491391 -73158905 - B3 SINE B2 -23 193 44 9 1298 1858 76 15 8 chrX 93491391 93491657 -73158639 + L1_Mus3 LINE L1 6371 6638 0 9 1298 1058 234 5 10 chrX 93491657 93491700 -73158596 - B3 SINE B2 -173 43 1 9 1298 1521 312 65 8 chrX 93491776 93492371 -73157925 + Lx9 LINE L1 6362 6990 -654 9 1298 3769 124 74 8 chrX 93492372 93492997 -73157299 + Lx4A LINE L1 6391 7056 -2 9 1298 374 124 22 22 chrX 93493024 93493115 -73157181 + GA-rich Low_complexity Low_complexity 2 92 0 9 1298 336 353 84 15 chrX 93493355 93493628 -73156668 - Lx9 LINE L1 -215 7429 7138 9 1298 251 284 109 9 chrX 93494403 93494513 -73155783 + L2a LINE L2 3304 3424 -2 9 1298 664 331 86 15 chrX 93494705 93494772 -73155524 - B4 SINE B4 -6 286 218 9 1298 360 0 0 0 chrX 93494772 93494812 -73155484 + (TTA)n Simple_repeat Simple_repeat 2 41 0 9 1298 664 331 86 15 chrX 93494812 93494936 -73155360 - B4 SINE B4 -75 217 80 9 1298 234 0 0 0 chrX 93494936 93494962 -73155334 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 9 1298 664 331 86 15 chrX 93494962 93495036 -73155260 - B4 SINE B4 -213 79 3 9 1298 324 382 73 0 chrX 93495294 93495404 -73154892 + B1F1 SINE Alu 18 135 -14 9 1298 231 284 0 26 chrX 93495412 93495488 -73154808 + GA-rich Low_complexity Low_complexity 3 76 0 9 1298 2096 164 54 35 chrX 93496074 93496479 -73153817 - MTC LTR MaLR -8 413 1 9 1298 3064 211 72 64 chrX 93496770 93497650 -73152646 - Lx6 LINE L1 -923 6537 5651 9 1298 1827 279 43 34 chrX 93498121 93499288 -73151008 + Lx9 LINE L1 5396 6604 -869 9 1298 389 147 0 0 chrX 93499581 93499649 -73150647 + Lx4B LINE L1 5851 5918 -1140 9 1298 2724 57 3 3 chrX 93499649 93500000 -73150296 - MTA_Mm LTR MaLR 0 396 46 9 1298 348 22 0 22 chrX 93500000 93500046 -73150250 - MTA_Mm LTR MaLR -351 45 1 1 1298 5060 181 107 32 chrX 93500046 93501101 -73149195 + Lx5 LINE L1 5914 7047 -3 2 1298 382 275 73 47 chrX 93501182 93501373 -73148923 + Lx8 LINE L1 6110 6305 -1168 3 1298 1758 130 4 0 chrX 93503642 93503918 -73146378 - L1_Mus3 LINE L1 -614 5269 4993 4 1298 4452 85 64 3 chrX 93503919 93505181 -73145115 + L1_Mus3 LINE L1 5301 6638 0 4 1298 1003 54 0 0 chrX 93505237 93505366 -73144930 + B1_Mus1 SINE Alu 20 148 0 5 1298 4255 26 0 0 chrX 93505369 93505863 -73144433 + L1_Mm LINE L1 5093 5586 -297 6 1298 8484 29 0 0 chrX 93505863 93506859 -73143437 + L1Md_A LINE L1 5587 6582 0 7 1298 39 50 0 0 chrX 93507849 93507909 -73142387 + AT_rich Low_complexity Low_complexity 1 60 0 8 1298 1020 109 13 13 chrX 93508002 93508151 -73142145 - B1_Mur3 SINE Alu 0 149 1 9 1298 379 255 57 32 chrX 93510544 93510702 -73139594 + L1MB8 LINE L1 5801 5962 -216 1 1298 1031 223 5 10 chrX 93511192 93511396 -73138900 + B3 SINE B2 1 203 -13 1 1298 7870 56 2 2 chrX 93511571 93512549 -73137747 + L1_Mus2 LINE L1 5587 6564 -2 1 1298 2076 98 22 26 chrX 93512586 93512899 -73137397 - L1_Mus1 LINE L1 -2 6565 6254 1 1298 509 0 16 0 chrX 93513074 93513135 -73137161 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 1 1298 597 240 70 0 chrX 93513553 93513682 -73136614 + B1_Mur2 SINE Alu 2 139 -10 1 1298 297 0 0 0 chrX 93513682 93513715 -73136581 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 1298 3115 241 64 24 chrX 93513921 93514781 -73135515 + Lx9 LINE L1 6729 7622 -22 1 1298 194 33 0 62 chrX 93514829 93514861 -73135435 + (TATG)n Simple_repeat Simple_repeat 1 30 0 1 1298 614 353 51 4 chrX 93514867 93515140 -73135156 - B4A SINE B4 -6 286 1 1 1298 423 0 0 0 chrX 93515378 93515425 -73134871 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1298 227 279 79 0 chrX 93516407 93516547 -73133749 + L1MC4 LINE L1 7013 7163 -879 2 1298 340 279 25 0 chrX 93517927 93518006 -73132290 - ID4_ SINE ID -2 81 1 2 1298 505 282 66 21 chrX 93518593 93518845 -73131451 + Lx9 LINE L1 5743 6006 -1638 2 1298 431 216 112 1 chrX 93518921 93519041 -73131255 - MT2A LTR ERVL 0 562 419 2 1298 192 143 0 0 chrX 93519210 93519252 -73131044 + (A)n Simple_repeat Simple_repeat 1 42 0 2 1298 342 0 0 0 chrX 93519626 93519664 -73130632 + (TC)n Simple_repeat Simple_repeat 2 39 0 2 1298 591 15 0 0 chrX 93519664 93519731 -73130565 + (TA)n Simple_repeat Simple_repeat 1 68 0 2 1298 2758 138 59 65 chrX 93519734 93520177 -73130119 - Lx LINE L1 -58 6596 6157 2 1298 1921 75 4 0 chrX 93520177 93520431 -73129865 - L1_Mus1 LINE L1 0 6567 6313 2 1298 2758 138 59 65 chrX 93520431 93520529 -73129767 - Lx LINE L1 -498 6156 6058 2 1298 1248 81 0 0 chrX 93520540 93520712 -73129584 - L1_Mus1 LINE L1 0 6567 6396 3 1298 3044 51 49 0 chrX 93520712 93521102 -73129194 - L1_Mus1 LINE L1 -331 6236 5828 3 1298 1366 92 0 0 chrX 93521096 93521280 -73129016 - L1_Mm LINE L1 -780 5103 4920 3 1298 1528 64 5 29 chrX 93521261 93521470 -73128826 + L1_Mus1 LINE L1 5727 5930 -637 3 1298 2914 110 72 1 chrX 93521466 93522177 -73128119 - Lx LINE L1 -581 6073 5284 2 1298 2032 229 90 8 chrX 93522745 93523246 -73127050 - Lx9 LINE L1 -1 7643 7102 3 1298 310 188 16 0 chrX 93523243 93523307 -73126989 - L1_Rod LINE L1 -393 5454 5390 3 1298 444 198 0 149 chrX 93523306 93523413 -73126883 + Lx9 LINE L1 7146 7236 -408 3 1298 518 231 89 21 chrX 93523427 93523617 -73126679 + Lx9 LINE L1 7441 7643 -1 3 1298 556 254 219 0 chrX 93525212 93525381 -73124915 + B3 SINE B2 1 206 -10 3 1298 207 222 41 14 chrX 93525459 93525532 -73124764 + (TA)n Simple_repeat Simple_repeat 1 75 0 3 1298 312 279 0 0 chrX 93525535 93525603 -73124693 + PB1D10 SINE Alu 9 76 -41 3 1298 23 0 0 0 chrX 93527120 93527143 -73123153 + AT_rich Low_complexity Low_complexity 1 23 0 3 1298 408 40 0 0 chrX 93527307 93527357 -73122939 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 1298 387 0 0 0 chrX 93527374 93527417 -73122879 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 4 1298 3890 54 12 0 chrX 93527992 93528473 -73121823 + L1_Mus1 LINE L1 6081 6567 0 4 1298 511 266 57 31 chrX 93528561 93528676 -73121620 + L1M2 LINE L1 2427 2545 -4304 4 1298 252 86 0 0 chrX 93528676 93528711 -73121585 + (CGA)n Simple_repeat Simple_repeat 3 37 0 4 1298 511 324 59 25 chrX 93528711 93529000 -73121296 + L1M2 LINE L1 2546 2918 -3664 4 1298 3413 225 138 46 chrX 93529090 93530281 -73120015 + L1_Rod LINE L1 1667 2945 -2902 4 1298 212 0 36 0 chrX 93530281 93530309 -73119987 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 4 1298 3413 225 138 46 chrX 93530309 93530353 -73119943 + L1_Rod LINE L1 2946 3015 -2832 4 1298 198 0 0 0 chrX 93530355 93530377 -73119919 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 1298 496 240 121 31 chrX 93530907 93531131 -73119165 + L1_Rod LINE L1 3015 3258 -2589 4 1298 291 267 0 0 chrX 93531304 93531364 -73118932 - Lx8 LINE L1 -967 6506 6447 4 1298 1439 285 145 21 chrX 93531362 93531898 -73118398 + Lx9 LINE L1 6767 7341 -303 4 1298 1008 25 0 0 chrX 93531898 93532017 -73118279 + (GA)n Simple_repeat Simple_repeat 2 120 0 5 1298 1439 285 145 21 chrX 93532017 93532226 -73118070 + Lx9 LINE L1 7342 7603 -41 4 1298 22 56 0 0 chrX 93532267 93532303 -73117993 + AT_rich Low_complexity Low_complexity 1 36 0 5 1298 407 311 77 9 chrX 93532326 93532547 -73117749 + L1MA5A LINE L1 5644 5879 -418 5 1298 871 153 29 0 chrX 93532563 93532700 -73117596 + B1_Mur2 SINE Alu 9 149 0 5 1298 350 115 0 16 chrX 93532792 93532854 -73117442 + (CATATA)n Simple_repeat Simple_repeat 4 64 0 5 1298 36 53 0 0 chrX 93532978 93533035 -73117261 + AT_rich Low_complexity Low_complexity 1 57 0 5 1298 283 339 90 40 chrX 93533046 93533246 -73117050 - Charlie1 DNA MER1_type -2567 214 5 5 1298 309 313 20 118 chrX 93534113 93534265 -73116031 - B4A SINE B4 -6 286 150 5 1298 5474 218 60 66 chrX 93534277 93535932 -73114364 + Lx6 LINE L1 5296 6884 -576 5 1298 522 0 0 0 chrX 93535932 93535990 -73114306 + (GA)n Simple_repeat Simple_repeat 1 58 0 5 1298 5474 217 79 52 chrX 93535990 93536173 -73114123 + Lx6 LINE L1 6885 7106 -354 5 1298 2198 280 146 33 chrX 93536480 93537428 -73112868 + L1_Mur3 LINE L1 4060 5126 -754 6 1298 309 82 0 0 chrX 93537428 93537477 -73112819 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1298 2198 280 146 33 chrX 93537477 93538092 -73112204 + L1_Mur3 LINE L1 5127 5798 -82 6 1298 3113 38 0 0 chrX 93538090 93538460 -73111836 - L1Md_F2 LINE L1 -254 5629 5260 6 1298 7804 44 4 5 chrX 93538460 93539419 -73110877 + L1Md_F2 LINE L1 5620 6577 -5 6 1298 2330 192 47 12 chrX 93540008 93540514 -73109782 - RLTR28 LTR ERVL 0 524 1 6 1298 241 256 8 23 chrX 93541079 93541185 -73109111 + CT-rich Low_complexity Low_complexity 25 127 0 6 1298 1104 68 0 0 chrX 93541185 93541331 -73108965 + (TTTC)n Simple_repeat Simple_repeat 4 149 0 6 1298 241 256 8 23 chrX 93541331 93541352 -73108944 + polypyrimidine Low_complexity Low_complexity 3 24 0 6 1298 498 263 0 0 chrX 93541362 93541461 -73108835 - RSINE1 SINE B4 -66 99 1 6 1298 348 302 7 26 chrX 93541515 93541668 -73108628 + CT-rich Low_complexity Low_complexity 2 151 0 6 1298 2662 148 114 16 chrX 93541669 93542177 -73108119 - Lx4B LINE L1 -2 7056 6499 6 1298 1260 169 34 30 chrX 93542148 93542416 -73107880 + Lx4B LINE L1 5917 6185 -873 7 1298 285 174 44 44 chrX 93542417 93542514 -73107782 - Lx9 LINE L1 -31 7613 7517 7 1298 438 20 0 0 chrX 93542514 93542565 -73107731 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1298 1086 284 38 12 chrX 93542565 93542904 -73107392 - Lx9 LINE L1 -171 7473 7126 7 1298 541 254 16 16 chrX 93542970 93543094 -73107202 - Lx6 LINE L1 -273 7187 7064 7 1298 2882 27 5 45 chrX 93543149 93543531 -73106765 + IAPLTR1_Mm LTR ERVK 1 367 0 7 1298 7498 92 95 22 chrX 93543531 93544748 -73105548 + IAPEz-int LTR ERVK 8 1313 -5168 7 1298 19595 21 18 2 chrX 93544747 93547970 -73102326 + IAPEz-int LTR ERVK 3210 6481 0 7 1298 2882 27 5 45 chrX 93547970 93548352 -73101944 + IAPLTR1_Mm LTR ERVK 1 367 0 7 1298 512 288 43 5 chrX 93548353 93548538 -73101758 - L1_Mur3 LINE L1 -363 5517 5326 7 1298 673 204 50 115 chrX 93548547 93548671 -73101625 - Lx9 LINE L1 0 7644 7518 7 1298 240 35 0 0 chrX 93548671 93548700 -73101596 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1298 673 204 50 115 chrX 93548700 93548857 -73101439 - Lx9 LINE L1 -127 7517 7384 7 1298 614 89 26 9 chrX 93548857 93548970 -73101326 + (TA)n Simple_repeat Simple_repeat 2 116 0 7 1298 673 204 50 115 chrX 93548970 93549025 -73101271 - Lx9 LINE L1 -261 7383 7329 7 1298 415 291 201 29 chrX 93549053 93549297 -73100999 + Lx8 LINE L1 7040 7325 -148 7 1298 831 281 191 23 chrX 93549608 93550137 -73100159 + Lx5 LINE L1 5167 5784 -96 8 1298 439 200 23 31 chrX 93550141 93550270 -73100026 + Lx5 LINE L1 5973 6100 -950 8 1298 1325 221 26 29 chrX 93550313 93550620 -73099676 + Lx5 LINE L1 6745 7050 0 8 1298 272 305 21 10 chrX 93550634 93550730 -73099566 + Lx2B LINE L1 5801 5897 -1103 8 1298 27 0 0 0 chrX 93551012 93551039 -73099257 + AT_rich Low_complexity Low_complexity 1 27 0 8 1298 1191 42 6 51 chrX 93551363 93551539 -73098757 - L1Md_F3 LINE L1 0 6584 6417 8 1298 777 43 0 0 chrX 93551539 93551632 -73098664 - L1_Mm LINE L1 -209 5674 5582 8 1298 214 364 40 24 chrX 93551787 93551911 -73098385 + MIR3 SINE MIR 75 200 -8 8 1298 1454 209 78 36 chrX 93551964 93552321 -73097975 + ORR1D1 LTR MaLR 1 372 -2 8 1298 402 21 0 0 chrX 93552694 93552741 -73097555 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 8 1298 302 361 0 0 chrX 93552945 93553028 -73097268 + PB1D10 SINE Alu 4 86 -31 8 1298 678 282 126 27 chrX 93553102 93553324 -73096972 + MTE2a LTR MaLR 1 244 -135 8 1298 1245 96 0 0 chrX 93553324 93553502 -73096794 + (TTC)n Simple_repeat Simple_repeat 3 180 0 9 1298 4192 36 0 0 chrX 93554161 93554655 -73095641 - L1Md_F2 LINE L1 -12 6570 6077 9 1298 615 247 92 44 chrX 93555011 93555248 -73095048 + MTE2a LTR MaLR 129 378 -1 9 1298 373 329 118 40 chrX 93555277 93555581 -73094715 + L1M5 LINE L1 5417 5744 -380 9 1298 23 54 0 0 chrX 93555588 93555625 -73094671 + AT_rich Low_complexity Low_complexity 1 37 0 9 1298 22 70 0 0 chrX 93555988 93556031 -73094265 + AT_rich Low_complexity Low_complexity 1 43 0 9 1298 660 77 0 0 chrX 93556216 93556307 -73093989 + (GGGA)n Simple_repeat Simple_repeat 3 93 0 9 1298 258 261 21 83 chrX 93556348 93556444 -73093852 - B4A SINE B4 -8 284 195 9 1298 243 0 0 0 chrX 93556476 93556503 -73093793 + (CA)n Simple_repeat Simple_repeat 2 28 0 9 1298 22 99 0 0 chrX 93557191 93557262 -73093034 + AT_rich Low_complexity Low_complexity 1 71 0 9 1298 309 253 45 22 chrX 93557294 93557383 -73092913 + PB1D10 SINE Alu 24 114 -3 1 1298 280 257 40 0 chrX 93557390 93557464 -73092832 + ID4 SINE ID 5 81 -2 1 1298 1515 231 60 28 chrX 93557963 93558315 -73091981 - ORR1D2 LTR MaLR -7 363 1 1 1298 253 263 50 20 chrX 93558543 93558644 -73091652 + L1MB8 LINE L1 6003 6106 -72 1 1298 1117 71 0 0 chrX 93558782 93558923 -73091373 + B1_Mm SINE Alu 2 142 -5 1 1298 243 0 0 0 chrX 93558927 93558954 -73091342 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1298 610 294 27 43 chrX 93558960 93559145 -73091151 + B3A SINE B2 1 182 -16 1 1298 25 51 0 0 chrX 93559165 93559204 -73091092 + AT_rich Low_complexity Low_complexity 1 39 0 1 1298 1142 54 36 0 chrX 93559395 93559562 -73090734 - Lx2B LINE L1 -269 6731 6559 1 1298 644 0 13 0 chrX 93559594 93559670 -73090626 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 1298 468 0 0 0 chrX 93559670 93559721 -73090575 + (GA)n Simple_repeat Simple_repeat 2 53 0 1 1298 1386 146 50 0 chrX 93559837 93560077 -73090219 + Lx2A1 LINE L1 6751 7002 -6 1 1298 539 230 55 44 chrX 93560296 93560478 -73089818 + Lx9 LINE L1 5379 5562 -285 1 1298 453 247 172 7 chrX 93560593 93560744 -73089552 + Lx9 LINE L1 6367 6542 -1102 1 1298 1136 286 35 58 chrX 93560809 93561295 -73089001 + Lx9 LINE L1 6722 7196 -448 1 1298 240 280 26 13 chrX 93561424 93561500 -73088796 - ID4 SINE ID -3 80 4 1 1298 321 269 66 16 chrX 93561613 93561734 -73088562 + L1MC5 LINE L1 7802 7928 -33 1 1298 499 228 8 26 chrX 93561739 93561856 -73088440 + PB1D10 SINE Alu 2 116 -1 1 1298 420 237 42 21 chrX 93562093 93562188 -73088108 + B1F2 SINE Alu 50 146 -3 1 1298 235 250 0 0 chrX 93562196 93562240 -73088056 + ID4 SINE ID 2 45 -38 1 1298 1669 48 0 0 chrX 93562392 93562600 -73087696 - L1_Mus1 LINE L1 0 6567 6360 1 1298 1649 97 4 4 chrX 93562600 93562849 -73087447 + L1_Mm LINE L1 5280 5528 -355 1 1298 622 221 62 8 chrX 93563776 93563904 -73086392 - B1_Mur1 SINE Alu -1 148 14 1 1298 1335 6 0 0 chrX 93563904 93564061 -73086235 + L1Md_T LINE L1 6426 6582 0 1 1298 832 277 55 8 chrX 93564278 93564515 -73085781 + B4 SINE B4 1 248 -44 1 1298 528 77 0 0 chrX 93564535 93564613 -73085683 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 1298 513 0 0 0 chrX 93564929 93564986 -73085310 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 1298 33 25 0 0 chrX 93565028 93565068 -73085228 + AT_rich Low_complexity Low_complexity 1 40 0 1 1298 30555 88 9 6 chrX 93565089 93571007 -73079289 - L1Md_F2 LINE L1 -1 6581 642 1 1298 636 153 0 0 chrX 93571007 93571105 -73079191 - L1Md_F2 LINE L1 -6132 506 409 1 1298 933 66 29 21 chrX 93571129 93571269 -73079027 - L1_Mus2 LINE L1 -3 6563 6423 1 1298 22 35 0 0 chrX 93571433 93571462 -73078834 + AT_rich Low_complexity Low_complexity 1 29 0 1 1298 900 316 7 40 chrX 93571512 93571786 -73078510 - B4A SINE B4 -27 265 1 1 1298 25 0 0 0 chrX 93572955 93572980 -73077316 + AT_rich Low_complexity Low_complexity 1 25 0 1 1298 552 297 0 0 chrX 93573100 93573245 -73077051 - Lx8 LINE L1 -152 7321 7177 1 1298 229 299 38 38 chrX 93573319 93573399 -73076897 + ID2 SINE ID 4 83 0 1 1298 350 286 0 0 chrX 93573500 93573577 -73076719 - ID4_ SINE ID -4 79 3 1 1298 285 278 188 0 chrX 93574353 93574497 -73075799 - Lx7 LINE L1 -334 7362 7192 1 1298 180 77 0 0 chrX 93574503 93574529 -73075767 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1298 33806 35 0 0 chrX 93574614 93579911 -73070385 + L1Md_T LINE L1 196 5589 -297 1 1298 9016 6 0 0 chrX 93579911 93580907 -73069389 + L1Md_T LINE L1 5590 6585 0 1 1298 517 295 27 51 chrX 93580954 93581211 -73069085 + BLACKJACK DNA AcHobo 2120 2370 -574 1 1298 231 170 0 0 chrX 93581589 93581636 -73068660 + CT-rich Low_complexity Low_complexity 2 48 0 1 1298 414 0 0 0 chrX 93581900 93581946 -73068350 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1298 416 264 74 0 chrX 93582188 93582309 -73067987 - B3 SINE B2 -1 215 86 1 1298 21 0 0 0 chrX 93582699 93582720 -73067576 + AT_rich Low_complexity Low_complexity 1 21 0 1 1298 204 125 0 0 chrX 93582722 93582754 -73067542 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1298 1108 89 0 0 chrX 93582754 93582900 -73067396 - B1_Mus2 SINE Alu 0 147 2 1 1298 1598 240 92 0 chrX 93583268 93583639 -73066657 + MTD LTR MaLR 1 405 -14 1 1298 1842 242 72 25 chrX 93583819 93584467 -73065829 - L1_Rod LINE L1 -543 5304 4626 1 1298 846 259 4 48 chrX 93584475 93584702 -73065594 - MTD LTR MaLR -7 412 196 1 1298 25 0 0 0 chrX 93585023 93585048 -73065248 + AT_rich Low_complexity Low_complexity 1 25 0 1 162 5763 187 51 14 chrX 93585054 93586245 -73064051 - Lx5 LINE L1 -3 7047 5813 1 1299 713 112 0 33 chrX 93586238 93586358 -73063938 - Lx4B LINE L1 -1356 5702 5587 1 1299 681 120 17 8 chrX 93586361 93586479 -73063817 + Lx5 LINE L1 5695 5813 -1237 1 1299 1024 193 66 18 chrX 93586696 93586987 -73063309 + ORR1C1 LTR MaLR 1 370 -8 1 1299 1303 161 27 5 chrX 93587407 93587626 -73062670 + URR1A DNA MER1_type 2 225 -1 1 1299 4947 78 14 3 chrX 93587812 93588532 -73061764 + L1Md_T LINE L1 421 1148 -5576 1 1299 7537 1 0 0 chrX 93588532 93589407 -73060889 + L1Md_Gf LINE L1 268 1142 -5380 1 1299 33853 41 0 0 chrX 93589373 93593757 -73056539 + L1Md_T LINE L1 1203 5586 -297 1 1299 9038 5 0 0 chrX 93593757 93594753 -73055543 + L1Md_T LINE L1 5587 6582 0 1 1299 35621 21 1 0 chrX 93594753 93599251 -73051045 + L1Md_T LINE L1 1105 5586 -297 1 1299 9025 6 0 0 chrX 93599251 93600247 -73050049 + L1Md_T LINE L1 5587 6582 0 1 1299 35967 16 1 1 chrX 93600247 93604746 -73045550 + L1Md_A LINE L1 1108 5586 -297 1 1299 8988 4 1 0 chrX 93604747 93605741 -73044555 + L1Md_A LINE L1 5588 6582 0 1 1299 15092 25 6 0 chrX 93605741 93607601 -73042695 + L1Md_T LINE L1 3716 5586 -297 1 1299 8245 45 0 0 chrX 93607601 93608596 -73041700 + L1Md_T LINE L1 5587 6581 -1 1 1299 450 0 0 0 chrX 93610527 93610577 -73039719 + (TAA)n Simple_repeat Simple_repeat 3 52 0 1 1299 3018 98 119 25 chrX 93610730 93611244 -73039052 + LTRIS2 LTR ERV1 3 564 0 1 1299 269 324 18 26 chrX 93612549 93612663 -73037633 + MERVK26-int LTR ERVK 6513 6625 -294 1 1299 531 0 0 0 chrX 93612990 93613049 -73037247 + (CAAAC)n Simple_repeat Simple_repeat 1 59 0 1 1299 218 222 0 18 chrX 93613050 93613105 -73037191 + (CAA)n Simple_repeat Simple_repeat 2 55 0 1 1299 1012 250 53 12 chrX 93613550 93613797 -73036499 + MTEa-int LTR MaLR 55 311 -1269 1 1299 882 233 72 5 chrX 93613816 93614010 -73036286 - B3 SINE B2 -9 207 1 1 1299 266 235 245 39 chrX 93614038 93614140 -73036156 - RSINE1 SINE B4 -34 131 9 1 1299 3631 305 70 27 chrX 93614132 93615139 -73035157 + MTEa-int LTR MaLR 300 1348 -232 1 1299 549 0 0 0 chrX 93615139 93615200 -73035096 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 1299 3631 305 70 27 chrX 93615200 93615420 -73034876 + MTEa-int LTR MaLR 1349 1579 -1 1 1299 454 179 0 25 chrX 93615420 93615500 -73034796 + MTEa LTR MaLR 1 78 -301 1 1299 224 122 24 0 chrX 93615500 93615541 -73034755 + (TTTTC)n Simple_repeat Simple_repeat 3 44 0 1 1299 604 335 0 12 chrX 93615594 93615763 -73034533 + MTEa LTR MaLR 66 232 -147 1 1299 733 73 9 9 chrX 93615824 93615934 -73034362 + (TTTC)n Simple_repeat Simple_repeat 3 112 0 1 1299 254 307 28 0 chrX 93615934 93616019 -73034277 + ORR1B1-int LTR MaLR 1444 1553 -27 1 1299 1974 174 136 3 chrX 93616014 93616449 -73033847 - RMER4B LTR ERVK -59 526 17 1 1299 722 267 0 0 chrX 93616457 93616603 -73033693 + MTEa LTR MaLR 234 379 0 1 1299 307 351 63 59 chrX 93616603 93616806 -73033490 - MLT1C LTR MaLR -43 424 221 1 1299 1020 335 39 41 chrX 93617085 93617599 -73032697 + RMER5 LTR ERV1 15 527 -7 1 1299 293 190 0 10 chrX 93618235 93618336 -73031960 + GA-rich Low_complexity Low_complexity 3 102 0 1 1299 204 125 0 0 chrX 93618334 93618366 -73031930 + (TAA)n Simple_repeat Simple_repeat 2 33 0 1 1299 24 67 0 0 chrX 93618559 93618604 -73031692 + AT_rich Low_complexity Low_complexity 1 45 0 1 1299 2729 42 0 3 chrX 93618718 93619051 -73031245 + L1Md_F2 LINE L1 5255 5586 -297 1 1299 8073 50 1 1 chrX 93619051 93620047 -73030249 + L1Md_F2 LINE L1 5587 6582 0 1 1299 1774 209 31 6 chrX 93620198 93620555 -73029741 + ORR1D1 LTR MaLR 1 366 -8 1 1299 819 164 29 145 chrX 93620708 93620915 -73029381 - ORR1C2 LTR MaLR -2 382 194 1 1299 2752 168 2 6 chrX 93620915 93621412 -73028884 + L1_Mm LINE L1 4856 5350 -533 1 1299 612 152 0 0 chrX 93621415 93621514 -73028782 - ORR1C2 LTR MaLR -285 99 1 1 1299 299 246 92 0 chrX 93621545 93621610 -73028686 - PB1D7 SINE Alu -9 111 41 1 1299 1303 226 122 31 chrX 93622270 93622605 -73027691 - MTD LTR MaLR 0 419 49 1 1299 381 22 0 0 chrX 93622605 93622651 -73027645 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 1299 1303 226 122 31 chrX 93622651 93622699 -73027597 - MTD LTR MaLR -371 48 2 1 1299 283 266 0 0 chrX 93622963 93623027 -73027269 + ID2 SINE ID 4 67 -16 1 1299 236 325 38 38 chrX 93623641 93623772 -73026524 - LTR75_1 LTR ERV1 -43 503 373 1 1299 1548 124 115 11 chrX 93623910 93624179 -73026117 - Lx3B LINE L1 -51 6922 6626 1 1299 1493 221 44 60 chrX 93624306 93624787 -73025509 + Lx7 LINE L1 5684 6156 -1540 1 1299 26 50 0 0 chrX 93624842 93624882 -73025414 + AT_rich Low_complexity Low_complexity 1 40 0 1 1299 2726 45 15 3 chrX 93624882 93625220 -73025076 - ORR1A1 LTR MaLR -4 342 1 1 1299 424 175 10 10 chrX 93625222 93625320 -73024976 + (TA)n Simple_repeat Simple_repeat 1 98 0 1 1299 240 86 0 0 chrX 93625348 93625383 -73024913 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1299 6089 209 19 12 chrX 93625383 93626560 -73023736 + Lx7 LINE L1 6245 7429 -267 1 1299 250 268 85 16 chrX 93626577 93626706 -73023590 + Lx7 LINE L1 7559 7696 0 1 1299 569 287 14 0 chrX 93627008 93627151 -73023145 + B3 SINE B2 65 209 -7 1 1299 374 16 15 45 chrX 93627507 93627573 -73022723 + (GTTTG)n Simple_repeat Simple_repeat 2 65 0 1 1299 23 54 0 0 chrX 93628003 93628040 -73022256 + AT_rich Low_complexity Low_complexity 1 37 0 1 1299 937 256 45 209 chrX 93628712 93629161 -73021135 - MTE2b LTR MaLR -4 375 1 1 1299 856 270 214 17 chrX 93629161 93629648 -73020648 - MTE2b-int LTR MaLR 0 1580 970 1 1299 1324 171 0 0 chrX 93629827 93630049 -73020247 - URR1B DNA MER1_type -1 224 3 1 1299 29 28 0 0 chrX 93630288 93630324 -73019972 + AT_rich Low_complexity Low_complexity 1 36 0 1 1299 225 0 0 0 chrX 93631037 93631062 -73019234 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1299 448 192 13 0 chrX 93631766 93631844 -73018452 + Lx9 LINE L1 7153 7231 -413 1 1299 441 263 128 50 chrX 93632562 93632742 -73017554 + B3A SINE B2 5 198 0 1 1299 27974 31 1 9 chrX 93632971 93636985 -73013311 + L1Md_T LINE L1 625 4596 -1287 2 1299 8010 41 15 0 chrX 93637017 93637994 -73012302 + L1Md_T LINE L1 5587 6578 -4 2 1299 304 148 67 11 chrX 93638450 93638539 -73011757 - Lx9 LINE L1 -10 7634 7541 2 1299 531 0 0 0 chrX 93638539 93638598 -73011698 + (GA)n Simple_repeat Simple_repeat 1 59 0 2 1299 7560 84 14 1 chrX 93639895 93641502 -73008794 - L1_Mus1 LINE L1 0 6567 4948 2 1299 484 276 97 44 chrX 93642631 93642915 -73007381 + L1_Mur3 LINE L1 5167 5443 -437 2 1299 3123 224 13 25 chrX 93642927 93643688 -73006608 + Lx7 LINE L1 6473 7267 -429 2 1299 736 112 66 0 chrX 93643691 93643843 -73006453 + CT-rich Low_complexity Low_complexity 3 164 0 2 1299 340 294 14 29 chrX 93643885 93644025 -73006271 + Lx7 LINE L1 7559 7696 0 2 1299 1797 35 9 9 chrX 93644187 93644418 -73005878 - L1Md_F3 LINE L1 0 6584 6354 2 1299 252 305 20 40 chrX 93644548 93644647 -73005649 - MIR SINE MIR -96 166 70 2 1299 30 27 0 0 chrX 93644796 93644833 -73005463 + AT_rich Low_complexity Low_complexity 1 37 0 2 1299 319 276 18 169 chrX 93644861 93645098 -73005198 - MLT1E2 LTR MaLR -298 207 7 2 1299 362 272 167 106 chrX 93645295 93645570 -73004726 - B4 SINE B4 0 292 1 2 1299 462 265 173 8 chrX 93646417 93646550 -73003746 + MER5A DNA MER1_type 31 185 -4 2 1299 421 250 0 0 chrX 93646780 93646860 -73003436 + RSINE1 SINE B4 25 104 -61 2 1299 401 36 18 0 chrX 93646883 93646938 -73003358 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 1299 297 0 0 0 chrX 93647620 93647653 -73002643 + (TC)n Simple_repeat Simple_repeat 1 33 0 2 1299 441 0 0 0 chrX 93647655 93647704 -73002592 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1299 1900 313 91 18 chrX 93647995 93648864 -73001432 + Lx8 LINE L1 6514 7445 -28 2 1299 1788 180 44 19 chrX 93649063 93649247 -73001049 - ORR1D1 LTR MaLR -1 373 182 2 1299 880 99 13 0 chrX 93649247 93649398 -73000898 + (GA)n Simple_repeat Simple_repeat 2 154 0 2 1299 1788 180 44 19 chrX 93649398 93649575 -73000721 - ORR1D1 LTR MaLR -193 181 3 2 1299 731 303 40 15 chrX 93649623 93649821 -73000475 - ID_B1 SINE B4 -20 204 2 2 1299 25 51 0 0 chrX 93649895 93649934 -73000362 + AT_rich Low_complexity Low_complexity 1 39 0 2 1299 23 0 0 0 chrX 93650230 93650253 -73000043 + AT_rich Low_complexity Low_complexity 1 23 0 2 1299 206 265 123 112 chrX 93651152 93651339 -72998957 - MIR3 SINE MIR -3 205 17 2 1299 212 346 148 0 chrX 93652420 93652521 -72997775 + MIRb SINE MIR 21 136 -132 2 1299 286 363 47 20 chrX 93652609 93652758 -72997538 - MIR SINE MIR -15 247 95 2 1299 396 59 0 0 chrX 93653551 93653602 -72996694 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 1299 489 17 0 0 chrX 93653892 93653950 -72996346 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 1299 414 57 0 0 chrX 93653953 93654006 -72996290 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 1299 423 273 28 83 chrX 93654011 93654119 -72996177 - B1F1 SINE Alu -38 111 10 2 1299 183 246 0 0 chrX 93654353 93654410 -72995886 + A-rich Low_complexity Low_complexity 3 59 0 2 1299 219 170 0 68 chrX 93654520 93654581 -72995715 - MIR SINE MIR -54 214 159 2 1299 186 43 0 0 chrX 93656023 93656046 -72994250 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 2 1299 326 233 39 126 chrX 93656059 93656162 -72994134 - PB1D10 SINE Alu -21 96 3 2 1299 541 314 19 7 chrX 93656486 93656640 -72993656 + MIR SINE MIR 33 188 -74 2 1299 437 0 0 19 chrX 93656782 93656836 -72993460 + (TTA)n Simple_repeat Simple_repeat 2 54 0 2 1299 1086 81 0 0 chrX 93656836 93656972 -72993324 - B1_Mus2 SINE Alu -10 137 2 2 1299 328 232 181 26 chrX 93657271 93657426 -72992870 - L1ME3A LINE L1 -25 6148 5970 2 1299 241 299 15 15 chrX 93657428 93657496 -72992800 - ID4_ SINE ID -1 82 15 2 1299 620 277 107 4 chrX 93657511 93657783 -72992513 - L1ME3A LINE L1 -200 5973 5674 2 1299 207 0 0 0 chrX 93658132 93658155 -72992141 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2 1299 351 271 83 0 chrX 93659016 93659112 -72991184 - MIRb SINE MIR -103 165 62 2 1299 690 13 0 0 chrX 93659190 93659269 -72991027 + (TTCTC)n Simple_repeat Simple_repeat 4 82 0 2 1299 241 155 0 33 chrX 93659304 93659337 -72990959 + polypyrimidine Low_complexity Low_complexity 27 58 0 2 1299 816 11 0 0 chrX 93659337 93659430 -72990866 + (TTTCC)n Simple_repeat Simple_repeat 4 96 0 2 1299 241 155 0 33 chrX 93659430 93659456 -72990840 + polypyrimidine Low_complexity Low_complexity 1 26 0 2 1299 1239 89 0 0 chrX 93659456 93659635 -72990661 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 2 1299 549 0 0 0 chrX 93659635 93659696 -72990600 + (TTCC)n Simple_repeat Simple_repeat 3 63 0 2 1299 376 294 0 0 chrX 93659737 93659822 -72990474 - B1F SINE Alu -36 113 29 2 1299 245 306 0 0 chrX 93660258 93660307 -72989989 - tRNA-Ala-GCY_ tRNA tRNA -12 63 15 2 1299 202 360 11 11 chrX 93660325 93660415 -72989881 - MIR SINE MIR -68 194 105 2 1299 293 353 7 43 chrX 93660421 93660560 -72989736 - MIR SINE MIR -128 134 1 2 1299 2322 42 3 0 chrX 93660624 93660909 -72989387 - L1Md_A LINE L1 -1 6581 6296 2 1299 334 292 11 0 chrX 93661501 93661590 -72988706 - PB1D10 SINE Alu 0 117 28 2 1299 480 35 0 0 chrX 93661618 93661676 -72988620 + (TTTCC)n Simple_repeat Simple_repeat 1 58 0 2 1299 912 91 0 59 chrX 93661681 93661867 -72988429 + C-rich Low_complexity Low_complexity 5 179 0 2 1299 881 117 14 0 chrX 93661905 93662050 -72988246 + (TTTC)n Simple_repeat Simple_repeat 2 148 0 2 1299 180 390 29 0 chrX 93662332 93662437 -72987859 + MIR SINE MIR 37 144 -64 2 1299 978 235 53 21 chrX 93662702 93662985 -72987311 + L1MA6 LINE L1 5505 5796 -504 2 1299 238 217 36 12 chrX 93663004 93663088 -72987208 + (TA)n Simple_repeat Simple_repeat 2 87 0 2 1299 757 276 86 19 chrX 93663101 93663415 -72986881 + L1MA6 LINE L1 5775 6109 -191 2 1299 255 300 0 0 chrX 93663449 93663509 -72986787 + PB1D10 SINE Alu 10 69 -48 2 1299 999 86 0 0 chrX 93664001 93664140 -72986156 + (TTTC)n Simple_repeat Simple_repeat 2 140 0 2 1299 1581 77 27 0 chrX 93664170 93664392 -72985904 - L1Md_F2 LINE L1 -1 6581 6354 2 1299 876 320 7 11 chrX 93664417 93664686 -72985610 - Lx8 LINE L1 -155 7318 7051 2 1299 622 289 11 0 chrX 93664702 93664882 -72985414 + Lx8 LINE L1 6841 7022 -451 2 1299 378 329 59 7 chrX 93665067 93665220 -72985076 - RSINE1 SINE B4 -2 163 3 2 1299 435 214 157 0 chrX 93666713 93666802 -72983494 - U1 snRNA snRNA -3 162 60 2 1299 3905 60 0 0 chrX 93666843 93667326 -72982970 - L1Md_F2 LINE L1 -295 6287 5805 2 1299 1530 58 5 0 chrX 93667326 93667533 -72982763 + L1Md_F2 LINE L1 6375 6582 0 2 1299 450 0 0 0 chrX 93669118 93669168 -72981128 + (TTCC)n Simple_repeat Simple_repeat 4 53 0 2 1299 711 0 0 0 chrX 93669168 93669246 -72981050 + (TCTA)n Simple_repeat Simple_repeat 2 80 0 2 1299 180 111 0 0 chrX 93669252 93669279 -72981017 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 1299 257 337 87 30 chrX 93669563 93669787 -72980509 + MIR SINE MIR 5 231 -31 2 1299 1113 88 0 13 chrX 93669811 93669960 -72980336 + B1_Mus1 SINE Alu 2 148 0 2 1299 189 147 0 0 chrX 93669962 93669996 -72980300 + (A)n Simple_repeat Simple_repeat 1 34 0 2 1299 184 59 59 0 chrX 93670007 93670041 -72980255 + (TAAAA)n Simple_repeat Simple_repeat 1 36 0 2 1299 5070 91 21 0 chrX 93673251 93673953 -72976343 - L1_Mus1 LINE L1 -303 5580 4864 2 1299 7828 62 0 1 chrX 93673957 93674938 -72975358 + L1_Mus1 LINE L1 5588 6567 0 2 1299 1150 295 39 29 chrX 93675277 93675858 -72974438 - L1MA5A LINE L1 -385 5918 5336 2 1299 313 282 0 13 chrX 93675858 93675937 -72974359 + B4A SINE B4 1 78 -214 2 1299 705 270 71 61 chrX 93676213 93676333 -72973963 - L1MA5A LINE L1 -623 5224 5091 2 1299 1405 48 11 11 chrX 93676333 93676524 -72973772 - L1Md_F2 LINE L1 0 6582 6392 2 1299 863 270 71 61 chrX 93676524 93676924 -72973372 - L1MA5A LINE L1 -990 5153 4699 2 1299 1015 277 50 46 chrX 93676967 93677737 -72972559 - Lx9 LINE L1 -1095 4785 3580 2 1299 249 33 0 0 chrX 93680818 93680848 -72969448 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1299 334 359 64 6 chrX 93681243 93681414 -72968882 + MIRc SINE MIR 44 224 -44 2 1299 32 67 0 0 chrX 93682289 93682349 -72967947 + AT_rich Low_complexity Low_complexity 1 60 0 2 1299 377 294 72 22 chrX 93682974 93683113 -72967183 + B1F SINE Alu 2 147 -2 2 1299 672 338 72 16 chrX 93683275 93683705 -72966591 - Lx8 LINE L1 -31 7442 6989 2 1299 237 235 0 34 chrX 93683719 93683807 -72966489 - L1_Mur3 LINE L1 -1583 4297 4213 2 1299 13126 97 16 5 chrX 93684484 93687118 -72963178 - L1VL2 LINE L1 -632 2983 320 2 1299 3575 68 2 0 chrX 93687114 93687657 -72962639 - L1_Mus2 LINE L1 -527 6039 5496 2 1299 2647 305 67 35 chrX 93687681 93687812 -72962484 - L1_Mur3 LINE L1 -2882 2998 2871 2 1299 606 291 54 5 chrX 93687812 93688016 -72962280 - B3 SINE B2 -1 215 2 2 1299 2647 305 67 35 chrX 93688016 93689605 -72960691 - L1_Mur3 LINE L1 -3010 2870 1224 2 1299 218 95 0 67 chrX 93689769 93689814 -72960482 + T-rich Low_complexity Low_complexity 1 42 0 2 1299 261 145 0 0 chrX 93689908 93689970 -72960326 + (T)n Simple_repeat Simple_repeat 1 62 0 2 1299 735 226 52 26 chrX 93690388 93690579 -72959717 - B3A SINE B2 -1 197 2 2 1299 278 275 29 0 chrX 93690736 93690805 -72959491 - tRNA-Ala-GCA tRNA tRNA -3 72 2 2 1299 896 97 19 6 chrX 93691087 93691243 -72959053 + L1_Mus3 LINE L1 6479 6636 -2 2 1299 270 0 0 0 chrX 93691537 93691567 -72958729 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 2 1299 325 301 78 36 chrX 93691700 93691893 -72958403 - L1M5 LINE L1 -516 5608 5408 2 1299 21 0 0 0 chrX 93691904 93691925 -72958371 + AT_rich Low_complexity Low_complexity 1 21 0 2 1299 340 306 0 0 chrX 93692027 93692099 -72958197 + ID4 SINE ID 12 83 0 2 1299 303 275 72 40 chrX 93692172 93692297 -72957999 + L3 LINE CR1 4254 4382 -107 2 1299 3124 42 10 0 chrX 93692309 93692693 -72957603 - RLTR10 LTR ERVK -2 388 1 2 1299 534 177 0 0 chrX 93692713 93692724 -72957572 - Lx3A LINE L1 -3 6978 6968 2 1299 288 0 0 0 chrX 93692724 93692756 -72957540 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2 1299 534 177 0 0 chrX 93692756 93692857 -72957439 - Lx3A LINE L1 -14 6967 6867 2 1299 504 300 29 29 chrX 93693721 93693896 -72956400 + MIR SINE MIR 74 248 -14 2 1299 22 0 0 0 chrX 93694637 93694659 -72955637 + AT_rich Low_complexity Low_complexity 1 22 0 3 1299 277 294 64 21 chrX 93694889 93694983 -72955313 - BC1_Mm scRNA scRNA -54 98 1 3 1299 183 390 89 53 chrX 93694985 93695402 -72954894 + L2c LINE L2 2937 3368 -19 3 1299 396 0 0 0 chrX 93696474 93696518 -72953778 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1299 188 283 100 10 chrX 93696681 93696781 -72953515 + MIRc SINE MIR 11 119 -149 3 1299 201 121 0 0 chrX 93696887 93696920 -72953376 + (TTCC)n Simple_repeat Simple_repeat 2 34 0 3 1299 182 122 0 68 chrX 93696916 93696960 -72953336 + CT-rich Low_complexity Low_complexity 1 41 0 3 1299 218 281 0 50 chrX 93697699 93697759 -72952537 + PB1 SINE Alu 64 120 -7 3 1299 226 336 28 46 chrX 93697939 93698048 -72952248 - MIR3 SINE MIR -9 199 93 3 1299 331 292 8 77 chrX 93698385 93698515 -72951781 + PB1 SINE Alu 1 121 -6 3 1299 22 0 0 0 chrX 93698708 93698730 -72951566 + AT_rich Low_complexity Low_complexity 1 22 0 3 1299 2270 186 23 38 chrX 93699003 93699479 -72950817 - RLTR40 LTR ERVK 0 817 349 3 1299 26 0 0 0 chrX 93699479 93699505 -72950791 + AT_rich Low_complexity Low_complexity 1 26 0 3 1299 4478 73 26 10 chrX 93699509 93700128 -72950168 - L1_Mus2 LINE L1 -1 6565 5937 3 1299 21365 132 12 19 chrX 93700129 93704356 -72945940 - L1Md_F LINE L1 -1327 4556 357 3 1299 365 239 37 9 chrX 93704366 93704478 -72945818 - L1VL2 LINE L1 -6135 283 179 3 1299 2100 168 11 3 chrX 93704478 93704842 -72945454 - RLTR40 LTR ERVK -450 367 1 3 1299 250 146 0 0 chrX 93706406 93706447 -72943849 - RLTR19-int LTR ERVK -2908 3229 3189 3 1299 273 146 0 0 chrX 93706793 93706841 -72943455 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 3 1299 668 192 98 135 chrX 93707767 93707960 -72942336 - RLTR40 LTR ERVK 0 817 632 3 1299 29619 81 9 9 chrX 93708060 93712967 -72937329 - L1Md_F2 LINE L1 -12 6570 1669 3 1299 7351 75 0 0 chrX 93712961 93713945 -72936351 - L1Md_F LINE L1 -2652 3231 2248 3 1299 632 143 363 0 chrX 93713943 93714111 -72936185 - L1Md_F LINE L1 -6103 513 285 3 1299 1468 149 56 22 chrX 93714111 93714379 -72935917 - Lx4A LINE L1 -8 7050 6774 3 1299 7801 230 55 38 chrX 93714469 93714793 -72935503 - Lx7 LINE L1 0 7696 7372 3 1299 258 32 0 0 chrX 93714793 93714824 -72935472 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 3 162 9173 201 47 30 chrX 93714824 93717512 -72932784 - Lx7 LINE L1 -325 7371 4634 3 1300 1033 119 17 0 chrX 93717512 93717689 -72932607 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 3 1300 9173 168 37 21 chrX 93717689 93718252 -72932044 - Lx7 LINE L1 -1247 4633 4055 3 1300 3370 70 0 0 chrX 93718257 93718686 -72931610 + L1_Mus2 LINE L1 6137 6565 -1 3 1300 411 351 19 19 chrX 93719276 93719433 -72930863 - RSINE1 SINE B4 -6 159 3 3 1300 386 366 45 8 chrX 93719581 93719713 -72930583 - B1F1 SINE Alu -9 140 4 3 1300 229 311 30 83 chrX 93719713 93719759 -72930537 - MT2B LTR ERVL -444 157 119 3 1300 235 372 98 49 chrX 93719851 93720015 -72930281 - L2b LINE L2 -215 3160 2989 3 1300 257 350 0 0 chrX 93720021 93720081 -72930215 + B4A SINE B4 87 146 -146 3 1300 214 389 13 53 chrX 93720081 93720097 -72930199 + AluF_3 SINE Alu 137 209 -102 3 1300 486 49 0 0 chrX 93720148 93720209 -72930087 + (GA)n Simple_repeat Simple_repeat 1 61 0 3 1300 787 295 39 57 chrX 93720266 93720795 -72929501 - L1_Mur3 LINE L1 -4514 1366 851 3 1300 1199 61 0 0 chrX 93721260 93721407 -72928889 + B1_Mm SINE Alu 1 147 0 3 1300 318 106 0 0 chrX 93721407 93721454 -72928842 + (A)n Simple_repeat Simple_repeat 1 47 0 3 1300 703 197 7 57 chrX 93721742 93721882 -72928414 + B1_Mur3 SINE Alu 5 137 -12 3 1300 585 0 0 0 chrX 93721882 93721947 -72928349 + (GA)n Simple_repeat Simple_repeat 2 66 0 3 1300 259 258 0 0 chrX 93722133 93722199 -72928097 + (TA)n Simple_repeat Simple_repeat 1 66 0 3 1300 312 27 0 0 chrX 93722261 93722298 -72927998 + (TATG)n Simple_repeat Simple_repeat 1 37 0 3 1300 1145 75 0 0 chrX 93723774 93723921 -72926375 - B1_Mus1 SINE Alu 0 148 2 3 1300 237 175 18 0 chrX 93723970 93724027 -72926269 + (TTA)n Simple_repeat Simple_repeat 2 59 0 3 1300 235 136 23 0 chrX 93725991 93726035 -72924261 - L1M3 LINE L1 -3050 3090 3046 3 1300 29 0 0 0 chrX 93726507 93726536 -72923760 + AT_rich Low_complexity Low_complexity 1 29 0 3 1300 1318 316 123 25 chrX 93726721 93728110 -72922186 - L1MB3 LINE L1 -224 5959 4402 3 1300 466 261 42 25 chrX 93728132 93728250 -72922046 - B1_Mur1 SINE Alu -1 148 29 3 1300 785 228 125 42 chrX 93728249 93728300 -72921996 - ORR1D1 LTR MaLR -141 243 177 3 1300 486 0 0 0 chrX 93728300 93728354 -72921942 + (GA)n Simple_repeat Simple_repeat 2 55 0 3 1300 785 206 85 43 chrX 93728354 93728521 -72921775 - ORR1D1 LTR MaLR -198 176 1 3 1300 537 159 6 17 chrX 93728531 93728710 -72921586 - L1MB3 LINE L1 -3970 1913 1824 3 1300 38566 50 5 9 chrX 93728705 93735035 -72915261 - L1Md_T LINE L1 0 6582 273 3 1300 4634 76 1 2 chrX 93735038 93736121 -72914175 - L1Md_Gf LINE L1 -4046 1840 662 3 1300 1349 30 18 6 chrX 93736127 93736294 -72914002 + L1Md_F2 LINE L1 3366 3534 -2349 3 1300 18220 25 0 0 chrX 93736280 93738442 -72911854 - L1_Mm LINE L1 -1085 4798 2637 3 1300 15690 73 2 0 chrX 93738437 93740513 -72909783 + L1Md_F2 LINE L1 3506 5586 -297 3 1300 7977 47 1 7 chrX 93740513 93741515 -72908781 + L1Md_F2 LINE L1 5587 6582 0 3 1300 1871 215 13 53 chrX 93741704 93742192 -72908104 - MTC-int LTR MaLR -641 457 1 3 1300 1893 226 54 0 chrX 93742196 93742586 -72907710 - MTC LTR MaLR -8 413 3 3 1300 569 291 37 37 chrX 93742605 93742819 -72907477 - MLT1B LTR MaLR -176 214 1 3 1300 689 333 134 32 chrX 93743213 93743557 -72906739 + MTEa LTR MaLR 1 379 0 3 1300 244 304 111 43 chrX 93743562 93743679 -72906617 + MIR SINE MIR 19 143 -119 3 1300 248 288 30 15 chrX 93746327 93746394 -72903902 - ID4 SINE ID -4 79 12 3 1300 380 201 88 0 chrX 93746410 93746569 -72903727 - L1M5 LINE L1 -742 5437 5265 3 1300 1141 312 81 26 chrX 93746574 93746964 -72903332 + L1MB8 LINE L1 5297 5709 -469 3 1300 291 325 0 0 chrX 93746964 93747044 -72903252 - ID4 SINE ID -2 81 2 3 1300 1141 312 81 26 chrX 93747044 93747410 -72902886 + L1MB8 LINE L1 5710 6094 -84 3 1300 273 191 0 0 chrX 93747531 93747578 -72902718 + L1MB8 LINE L1 6127 6173 -5 3 1300 595 328 16 39 chrX 93747639 93747896 -72902400 - RMER15 LTR ERVL -14 561 311 3 1300 348 335 101 34 chrX 93748201 93748380 -72901916 + B3A SINE B2 8 198 0 3 1300 250 318 45 0 chrX 93748592 93748658 -72901638 - ID2 SINE ID -9 74 6 3 1300 351 0 0 0 chrX 93750638 93750677 -72899619 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1300 295 364 96 44 chrX 93751512 93751762 -72898534 - LTR79 LTR ERVL 0 527 265 3 1300 231 36 0 0 chrX 93752674 93752702 -72897594 + (GA)n Simple_repeat Simple_repeat 2 29 0 3 1300 544 302 35 105 chrX 93753912 93754226 -72896070 + B4A SINE B4 1 292 0 3 1300 938 75 22 3 chrX 93754827 93754963 -72895333 + B1_Mm SINE Alu 29 147 0 3 1300 771 185 80 9 chrX 93755098 93755311 -72894985 - Lx9 LINE L1 0 7644 7417 3 1300 366 23 0 0 chrX 93755313 93755356 -72894940 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 1300 27 62 0 0 chrX 93755902 93755950 -72894346 + AT_rich Low_complexity Low_complexity 1 48 0 3 1300 265 222 37 0 chrX 93756057 93756138 -72894158 + (CAAA)n Simple_repeat Simple_repeat 2 85 0 3 1300 373 291 27 0 chrX 93756220 93756330 -72893966 - Lx7 LINE L1 -395 7301 7189 3 1300 7019 224 42 15 chrX 93756391 93757769 -72892527 - Lx6 LINE L1 -177 7283 5876 3 1300 444 37 0 0 chrX 93757769 93757823 -72892473 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 1300 7019 224 42 15 chrX 93757823 93757995 -72892301 - Lx6 LINE L1 -1585 5875 5692 3 1300 30798 89 11 20 chrX 93758523 93763776 -72886520 + L1Md_F2 LINE L1 381 5586 -297 3 1300 7841 55 3 5 chrX 93763777 93764773 -72885523 + L1Md_F2 LINE L1 5588 6581 -1 3 1300 1129 316 102 48 chrX 93765409 93766200 -72884096 - Lx8 LINE L1 -2 7471 6638 3 1300 902 9 9 0 chrX 93766394 93766501 -72883795 + (GA)n Simple_repeat Simple_repeat 1 108 0 3 1300 234 91 0 0 chrX 93766502 93766535 -72883761 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1300 334 275 36 7 chrX 93767409 93767548 -72882748 + (TA)n Simple_repeat Simple_repeat 2 144 0 3 1300 225 321 165 12 chrX 93767750 93767914 -72882382 - L2c LINE L2 0 3387 3199 3 1300 315 308 76 61 chrX 93767900 93768097 -72882199 - MIRb SINE MIR -3 265 66 3 1300 270 258 0 0 chrX 93770378 93770440 -72879856 + ID4_ SINE ID 2 63 -20 3 1300 585 0 0 0 chrX 93771108 93771173 -72879123 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 1300 1077 77 0 7 chrX 93771175 93771319 -72878977 - B1_Mus2 SINE Alu -3 144 2 3 1300 451 226 49 49 chrX 93771792 93771936 -72878360 + RLTR14 LTR ERV1 226 369 -13 3 1300 653 242 113 14 chrX 93772453 93772649 -72877647 - B3A SINE B2 -1 197 3 3 1300 366 242 0 15 chrX 93772964 93773031 -72877265 - RSINE1 SINE B4 -85 80 15 3 1300 630 272 129 26 chrX 93773033 93773297 -72876999 - Lx6 LINE L1 -4 7456 7166 3 1300 445 228 104 9 chrX 93773385 93773500 -72876796 + B1F1 SINE Alu 21 146 -3 3 1300 197 372 66 8 chrX 93773511 93773633 -72876663 + L2 LINE L2 2692 2820 -599 3 1300 327 358 7 36 chrX 93773968 93774107 -72876189 + ID_B1 SINE B4 80 214 -10 3 1300 266 261 122 0 chrX 93774208 93774323 -72875973 - L1M5 LINE L1 -351 5813 5685 3 1300 370 346 57 36 chrX 93774323 93774515 -72875781 + L1MD LINE L1 2715 2910 -3236 3 1300 233 19 0 102 chrX 93774557 93774616 -72875680 - L1_Mus2 LINE L1 0 6582 6527 3 1300 775 42 0 0 chrX 93774616 93774712 -72875584 + L1Md_F2 LINE L1 5732 5827 -755 3 1300 905 226 191 18 chrX 93774783 93775072 -72875224 - RLTR16 LTR ERVK -13 492 154 3 1300 4133 159 14 7 chrX 93775081 93776163 -72874133 - Lx2B LINE L1 -695 6305 5219 3 1300 649 193 30 0 chrX 93778147 93778282 -72872014 + L1MD LINE L1 5313 5451 -2544 3 1300 8175 137 60 6 chrX 93778680 93780527 -72869769 + Lx2B LINE L1 5031 6993 -7 3 1300 1365 310 72 8 chrX 93780545 93781211 -72869085 + L1MC1 LINE L1 5610 6318 -15 4 1300 235 289 105 7 chrX 93782135 93782288 -72868008 + L1_Mur1 LINE L1 1441 1608 -4278 4 1300 314 267 0 0 chrX 93782296 93782356 -72867940 + B1_Mur2 SINE Alu 1 60 -89 4 1300 1597 310 83 39 chrX 93782404 93784054 -72866242 + Lx6 LINE L1 4192 5916 -1544 4 1300 353 274 26 0 chrX 93785019 93785132 -72865164 - L1M2 LINE L1 -712 5588 5473 4 1300 183 146 0 0 chrX 93786227 93786268 -72864028 + (T)n Simple_repeat Simple_repeat 1 41 0 4 1300 243 0 0 0 chrX 93786306 93786333 -72863963 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1300 266 246 0 0 chrX 93786333 93786390 -72863906 - B1_Mur1 SINE Alu -10 139 83 4 1300 965 138 7 0 chrX 93786829 93786974 -72863322 - B1_Mur3 SINE Alu -1 148 3 4 1300 1199 35 0 0 chrX 93787109 93787253 -72863043 - B1_Mm SINE Alu -3 144 1 4 1300 240 258 42 73 chrX 93787368 93787464 -72862832 + L2a LINE L2 2365 2457 -962 4 1300 230 393 90 0 chrX 93787607 93787752 -72862544 + L2a LINE L2 2694 2851 -568 4 1300 466 170 88 62 chrX 93787759 93787872 -72862424 - B1_Mur4 SINE Alu 0 150 35 4 1300 328 385 72 20 chrX 93787913 93788162 -72862134 + L2a LINE L2 2911 3172 -254 4 1300 762 275 167 60 chrX 93788201 93788681 -72861615 - MT2A LTR ERVL -2 531 1 4 1300 518 369 43 33 chrX 93788686 93788989 -72861307 - MLT1A LTR MaLR -68 306 1 4 1300 221 366 33 46 chrX 93789087 93789239 -72861057 + L2a LINE L2 3273 3422 -4 4 1300 24 0 0 0 chrX 93789579 93789603 -72860693 + GC_rich Low_complexity Low_complexity 1 24 0 4 1300 1779 193 31 60 chrX 93790256 93790641 -72859655 - ORR1C1 LTR MaLR 0 378 5 4 1300 2700 172 2 5 chrX 93791947 93792384 -72857912 + MERVK26-int LTR ERVK 3613 4048 -2871 4 1300 445 267 20 0 chrX 93792504 93792605 -72857691 - ORR1D1 LTR MaLR 0 374 272 4 1300 3433 180 78 36 chrX 93792622 93793394 -72856902 - RLTR40 LTR ERVK -13 804 1 4 1300 968 225 103 48 chrX 93793394 93793641 -72856655 - ORR1D1 LTR MaLR -113 261 1 4 1300 830 257 55 9 chrX 93793698 93793918 -72856378 + Lx9 LINE L1 6649 6878 -766 4 1300 1408 297 89 0 chrX 93793936 93794407 -72855889 - Lx9 LINE L1 -171 7473 6961 4 1300 489 231 103 0 chrX 93794434 93794551 -72855745 + Lx9 LINE L1 6867 6995 -649 4 1300 613 307 22 18 chrX 93794538 93794760 -72855536 + Lx9 LINE L1 7207 7429 -215 4 1300 24 0 0 0 chrX 93794760 93794784 -72855512 + AT_rich Low_complexity Low_complexity 1 24 0 4 1300 5589 223 29 25 chrX 93795177 93796011 -72854285 - Lx6 LINE L1 -237 7223 6377 4 1300 3048 71 2 8 chrX 93796011 93796409 -72853887 + MTA_Mm LTR MaLR 1 396 0 4 1300 5589 223 29 25 chrX 93796409 93796803 -72853493 - Lx6 LINE L1 -1084 6376 5990 4 1300 1205 286 31 48 chrX 93796799 93796867 -72853429 - L1_Mur3 LINE L1 -1775 4105 4044 4 1300 934 164 56 17 chrX 93796867 93797047 -72853249 - B2_Mm2 SINE B2 -8 187 1 4 1300 1205 286 31 48 chrX 93797047 93797521 -72852775 - L1_Mur3 LINE L1 -1837 4043 3572 4 1300 432 118 0 0 chrX 93797524 93797592 -72852704 + (TG)n Simple_repeat Simple_repeat 2 69 0 4 1300 1896 54 0 36 chrX 93797602 93797853 -72852443 - L1_Mus1 LINE L1 -386 6181 5940 4 1300 3065 47 3 0 chrX 93797853 93798233 -72852063 + L1_Mus1 LINE L1 6187 6567 0 4 1300 389 200 113 40 chrX 93798390 93798541 -72851755 - Lx9 LINE L1 -6 7638 7477 4 1300 256 298 11 18 chrX 93798551 93798672 -72851624 - L1_Mur3 LINE L1 -1463 4384 4269 4 1300 186 250 31 15 chrX 93798891 93798956 -72851340 + L2a LINE L2 3021 3086 -301 4 1300 310 277 0 12 chrX 93799346 93799430 -72850866 + Tigger14a DNA MER2_type 81 163 -161 4 1300 277 254 111 0 chrX 93800035 93800098 -72850198 + MTE2b LTR MaLR 18 87 -292 4 1300 1140 294 39 0 chrX 93800109 93800419 -72849877 + MTE2b LTR MaLR 58 379 0 4 1300 434 176 157 0 chrX 93800421 93800523 -72849773 + MTE2b-int LTR MaLR 3 120 -1460 4 1300 1011 142 5 0 chrX 93800541 93800765 -72849531 - L1_Mur1 LINE L1 -3790 2096 1872 4 1300 639 313 245 3 chrX 93800801 93801181 -72849115 + MTE2b-int LTR MaLR 309 780 -800 4 1300 6309 176 40 23 chrX 93801169 93802388 -72847908 - MTC-int LTR MaLR -17 1241 2 4 1300 425 204 53 11 chrX 93802387 93802481 -72847815 - MTC LTR MaLR 0 421 324 4 1300 465 299 109 0 chrX 93802504 93802651 -72847645 + MTE2b LTR MaLR 58 220 -159 4 1300 777 22 0 0 chrX 93802683 93802774 -72847522 + (TTTCC)n Simple_repeat Simple_repeat 2 92 0 4 1300 465 76 0 0 chrX 93802775 93802841 -72847455 + (TTTC)n Simple_repeat Simple_repeat 2 67 0 4 1300 27 49 0 0 chrX 93803092 93803133 -72847163 + AT_rich Low_complexity Low_complexity 1 41 0 4 1300 1666 277 54 24 chrX 93803141 93803604 -72846692 - Lx6 LINE L1 -23 7437 6961 4 1300 420 259 119 0 chrX 93803619 93803804 -72846492 - L1MA7 LINE L1 -53 6238 6032 4 1300 479 308 115 24 chrX 93803924 93804121 -72846175 - B3A SINE B2 0 216 1 4 1300 297 267 107 0 chrX 93804121 93804232 -72846064 + L2a LINE L2 3268 3369 -18 4 1300 833 260 91 93 chrX 93807464 93807657 -72842639 - RMER10A LTR ERVL -25 417 224 4 1300 563 0 15 0 chrX 93807657 93807724 -72842572 + (GA)n Simple_repeat Simple_repeat 2 69 0 4 1300 833 260 91 93 chrX 93807724 93807937 -72842359 - RMER10A LTR ERVL -219 223 14 4 1300 408 287 38 152 chrX 93808166 93808639 -72841657 - Lx9 LINE L1 -53 7591 7173 4 1300 2896 206 35 58 chrX 93808852 93809557 -72840739 - L1_Mur3 LINE L1 -6757 955 267 4 1300 1387 292 196 16 chrX 93809584 93810218 -72840078 + Lx8 LINE L1 6263 7010 -463 4 1300 208 224 17 17 chrX 93810383 93810442 -72839854 - MIRc SINE MIR -94 174 116 4 1300 483 303 149 66 chrX 93810473 93810823 -72839473 - MTE2a LTR MaLR 0 379 1 4 1300 3424 255 62 73 chrX 93811804 93813070 -72837226 + Lx9 LINE L1 900 2194 -3653 4 1300 1750 92 8 0 chrX 93813070 93813310 -72836986 + L1_Mus2 LINE L1 6324 6565 -1 4 1300 3424 245 72 92 chrX 93813310 93813481 -72836815 + Lx9 LINE L1 2195 2378 -3469 4 1300 805 67 0 0 chrX 93813481 93813586 -72836710 + B1_Mus1 SINE Alu 1 105 -43 4 1300 3424 245 72 92 chrX 93813586 93814046 -72836250 + Lx9 LINE L1 2379 2876 -2971 4 1300 1428 191 152 26 chrX 93814068 93814488 -72835808 + Lx9 LINE L1 5086 5558 -289 4 1300 1686 241 53 134 chrX 93814490 93815093 -72835203 - RLTR1D LTR ERV1 0 605 52 4 1300 1587 263 63 49 chrX 93815116 93815688 -72834608 + Lx9 LINE L1 5597 6157 -1316 4 1300 675 60 275 25 chrX 93815688 93815808 -72834488 - B1_Mur4 SINE Alu 0 150 1 4 1300 2193 253 72 24 chrX 93815808 93816431 -72833865 + Lx9 LINE L1 6158 6936 -708 4 1300 417 250 50 30 chrX 93816825 93816924 -72833372 - ETnERV2-int LTR ERVK -209 7197 7097 4 1300 370 157 132 0 chrX 93816924 93817007 -72833289 + Lx9 LINE L1 6899 6992 -652 4 1300 317 233 93 0 chrX 93817067 93817153 -72833143 + Lx9 LINE L1 6994 7087 -557 4 1300 270 338 35 41 chrX 93817647 93817792 -72832504 - L3 LINE CR1 -552 3937 3794 4 1300 1537 223 86 6 chrX 93818292 93818630 -72831666 - ORR1D1 LTR MaLR -9 365 1 4 1300 229 335 100 35 chrX 93818873 93819077 -72831219 + MIRc SINE MIR 49 262 0 4 1300 201 39 0 0 chrX 93819205 93819231 -72831065 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1300 1933 313 88 22 chrX 93819424 93820279 -72830017 + Lx9 LINE L1 6560 7470 -174 4 1300 204 40 0 0 chrX 93820287 93820312 -72829984 + (CATA)n Simple_repeat Simple_repeat 3 27 0 4 1300 2038 192 25 60 chrX 93820486 93820992 -72829304 + RLTR31A_Mm LTR ERVK 3 557 0 4 1300 536 243 0 0 chrX 93820992 93821094 -72829202 + B1_Mur1 SINE Alu 37 138 -11 4 1300 206 224 0 0 chrX 93821511 93821560 -72828736 + CT-rich Low_complexity Low_complexity 2 50 0 4 1300 213 108 0 0 chrX 93821560 93821597 -72828699 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 1300 842 207 0 17 chrX 93821952 93822124 -72828172 - B2_Mm2 SINE B2 -26 169 1 4 1300 817 288 49 9 chrX 93822671 93822991 -72827305 - MTEb LTR MaLR -2 377 1 4 1300 21 36 0 0 chrX 93823787 93823815 -72826481 + AT_rich Low_complexity Low_complexity 1 28 0 4 1300 333 194 15 0 chrX 93824219 93824286 -72826010 - MTD LTR MaLR 0 419 352 4 1300 9284 21 0 0 chrX 93824286 93825366 -72824930 + L1Md_T LINE L1 4507 5586 -297 4 1300 8467 29 1 0 chrX 93825366 93826361 -72823935 + L1Md_T LINE L1 5587 6582 0 4 1300 6718 35 1 0 chrX 93826361 93827159 -72823137 + L1Md_T LINE L1 5783 6581 -1 4 1300 1028 288 43 54 chrX 93827183 93827535 -72822761 - MTD LTR MaLR -58 361 14 4 1300 456 211 204 0 chrX 93827579 93827721 -72822575 + Lx5 LINE L1 6880 7050 0 4 1300 1096 101 0 0 chrX 93828093 93828241 -72822055 - B1_Mus1 SINE Alu 0 148 1 4 1300 180 0 0 0 chrX 93828340 93828360 -72821936 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 4 1300 261 0 0 0 chrX 93828361 93828390 -72821906 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 4 1300 1063 102 7 0 chrX 93828516 93828663 -72821633 + B1_Mus1 SINE Alu 1 148 0 4 1300 207 0 0 0 chrX 93828669 93828692 -72821604 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1300 824 118 0 15 chrX 93830147 93830284 -72820012 + (CATATA)n Simple_repeat Simple_repeat 4 138 0 4 1300 249 33 0 0 chrX 93830285 93830315 -72819981 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 1300 216 305 19 26 chrX 93830842 93830989 -72819307 - MIRc SINE MIR 0 262 116 4 1300 1158 76 0 0 chrX 93831561 93831732 -72818564 + (TC)n Simple_repeat Simple_repeat 2 172 0 4 1300 202 182 0 0 chrX 93831732 93831765 -72818531 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1300 822 315 62 31 chrX 93831765 93832089 -72818207 - RMER15 LTR ERVL -22 553 220 4 1300 2572 142 151 2 chrX 93832604 93833129 -72817167 - L1_Mur2 LINE L1 -345 5535 4932 4 1300 1146 205 46 15 chrX 93833150 93833413 -72816883 + Lx5 LINE L1 6780 7050 0 4 1300 30 0 0 0 chrX 93834001 93834031 -72816265 + AT_rich Low_complexity Low_complexity 1 30 0 4 1300 1070 270 67 69 chrX 93834090 93834256 -72816040 - L1_Mur2 LINE L1 -1588 4292 4144 4 1300 2422 94 0 3 chrX 93834256 93834585 -72815711 - L1_Mus2 LINE L1 -1 6565 6238 4 1300 1070 270 67 69 chrX 93834585 93835058 -72815238 - L1_Mur2 LINE L1 -1737 4143 3654 4 1300 183 0 0 147 chrX 93835242 93835344 -72814952 + (CAAGG)n Simple_repeat Simple_repeat 4 90 0 4 1300 1616 332 54 6 chrX 93835348 93836030 -72814266 - Lx8 LINE L1 -202 7271 6557 4 1300 1040 283 48 0 chrX 93836052 93836345 -72813951 - Lx8 LINE L1 -989 6484 6178 4 1300 42 20 0 0 chrX 93836345 93836394 -72813902 + AT_rich Low_complexity Low_complexity 1 49 0 4 1300 404 299 8 52 chrX 93836394 93836528 -72813768 - RSINE1 SINE B4 0 165 38 4 1300 347 373 54 59 chrX 93836610 93836849 -72813447 + MER21B LTR ERV1 226 463 -400 4 1300 248 294 0 14 chrX 93836853 93836922 -72813374 + MER77 LTR ERVL 536 603 -4 4 1300 819 209 140 31 chrX 93837473 93837666 -72812630 - B3 SINE B2 -2 214 1 4 1300 23 0 0 0 chrX 93837829 93837852 -72812444 + AT_rich Low_complexity Low_complexity 1 23 0 4 1300 1169 50 0 0 chrX 93837854 93837994 -72812302 - B1_Mus2 SINE Alu -7 140 1 4 1300 631 292 46 0 chrX 93838116 93838335 -72811961 - Lx7 LINE L1 -1800 5896 5668 4 1300 207 114 0 0 chrX 93838384 93838419 -72811877 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1300 249 277 0 0 chrX 93838436 93838519 -72811777 - L1_Mur1 LINE L1 -2286 3600 3518 4 1300 280 286 164 16 chrX 93838638 93838723 -72811573 + ORR1E LTR MaLR 205 294 -65 5 1300 952 82 19 6 chrX 93838723 93838882 -72811414 - L1_Mus4 LINE L1 -7 6629 6469 5 1300 280 286 164 16 chrX 93838882 93838924 -72811372 + ORR1E LTR MaLR 295 350 -9 5 1300 400 310 135 60 chrX 93838944 93839277 -72811019 - L1M5 LINE L1 -3519 2627 2270 5 1300 1266 90 0 4 chrX 93839367 93839647 -72810649 + (TTTC)n Simple_repeat Simple_repeat 1 278 0 5 1300 205 154 28 97 chrX 93839647 93839719 -72810577 + A-rich Low_complexity Low_complexity 4 70 0 5 1300 1174 320 53 5 chrX 93839745 93840182 -72810114 - Lx7 LINE L1 -393 7303 6846 5 1300 653 239 0 0 chrX 93840187 93840350 -72809946 + Lx7 LINE L1 6679 6841 -855 5 1300 5761 74 8 4 chrX 93840409 93841173 -72809123 - L1_Mus2 LINE L1 0 6566 5800 5 1300 765 107 16 3 chrX 93841173 93841312 -72808984 - L1_Mus2 LINE L1 -2 6582 6440 5 1300 7115 102 16 13 chrX 93841312 93842420 -72807876 - L1_Mm LINE L1 -69 5814 4703 5 1300 1481 249 78 17 chrX 93842464 93842926 -72807370 + Lx9 LINE L1 7155 7644 0 5 1300 307 287 75 30 chrX 93842929 93843062 -72807234 - L1MDa LINE L1 -4045 2588 2450 5 1300 301 260 0 9 chrX 93843158 93843263 -72807033 - L1MDa LINE L1 -4405 2228 2125 5 1300 552 280 15 0 chrX 93843830 93843962 -72806334 + ID_B1 SINE B4 91 224 0 5 1300 341 397 31 15 chrX 93844209 93844470 -72805826 - L2 LINE L2 -529 2890 2626 5 1300 613 303 94 41 chrX 93844780 93845024 -72805272 - B4 SINE B4 0 292 36 5 1300 234 62 0 0 chrX 93845836 93845868 -72804428 + (TCCA)n Simple_repeat Simple_repeat 3 34 0 5 1300 180 176 0 0 chrX 93845874 93845908 -72804388 + (TCTG)n Simple_repeat Simple_repeat 3 36 0 5 1300 643 251 78 31 chrX 93845909 93846102 -72804194 - B3 SINE B2 -14 202 1 5 1300 213 266 62 0 chrX 93846396 93846460 -72803836 - L2 LINE L2 -560 2859 2792 5 1300 348 111 0 0 chrX 93846469 93846523 -72803773 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1300 453 222 39 39 chrX 93846939 93847042 -72803254 - PB1D10 SINE Alu -8 109 7 5 1301 264 122 0 0 chrX 93847570 93847611 -72802685 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1301 519 324 36 21 chrX 93848415 93848607 -72801689 - MLT1B LTR MaLR -8 382 188 5 1301 38945 12 0 6 chrX 93848641 93855303 -72794993 - L1Md_A LINE L1 0 6582 1 5 1301 378 0 0 0 chrX 93855393 93855435 -72794861 + (TC)n Simple_repeat Simple_repeat 1 42 0 5 1301 234 0 0 0 chrX 93855435 93855460 -72794836 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1301 369 0 0 0 chrX 93855460 93855500 -72794796 + (GA)n Simple_repeat Simple_repeat 2 42 0 5 1301 1034 261 152 49 chrX 93855501 93855940 -72794356 - RLTR40 LTR ERVK -52 765 277 5 1301 491 0 17 0 chrX 93855940 93855999 -72794297 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 1301 1034 261 152 49 chrX 93855999 93856046 -72794250 - RLTR40 LTR ERVK -541 276 230 5 1301 207 0 0 0 chrX 93856417 93856440 -72793856 + (ATTG)n Simple_repeat Simple_repeat 2 24 0 5 1301 406 269 287 12 chrX 93856440 93856604 -72793692 - ID_B1 SINE B4 -11 213 5 5 1301 22 56 0 0 chrX 93856607 93856643 -72793653 + AT_rich Low_complexity Low_complexity 1 36 0 5 1301 2906 264 71 34 chrX 93856833 93857439 -72792857 - Lx9 LINE L1 -153 7491 6908 5 1301 1269 78 28 0 chrX 93857439 93857618 -72792678 + L1_Mus1 LINE L1 6382 6565 -2 5 1301 2906 264 71 34 chrX 93857618 93858102 -72792194 - Lx9 LINE L1 -737 6907 6212 5 1301 378 0 0 0 chrX 93858102 93858144 -72792152 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1301 3968 240 56 53 chrX 93858144 93859355 -72790941 - Lx9 LINE L1 -1262 6211 4954 5 1301 3635 33 15 22 chrX 93859355 93859819 -72790477 - L1Md_F3 LINE L1 0 6584 6124 5 1301 3968 204 40 58 chrX 93859819 93860127 -72790169 - Lx9 LINE L1 -894 4953 4657 5 1301 3551 234 55 22 chrX 93860185 93861480 -72788816 - Lx9 LINE L1 -1 7643 6307 5 1301 22 0 0 0 chrX 93862155 93862177 -72788119 + AT_rich Low_complexity Low_complexity 1 22 0 5 1301 250 278 31 10 chrX 93862177 93862275 -72788021 - Lx7 LINE L1 -12 7684 7585 5 1301 701 265 23 18 chrX 93862364 93862583 -72787713 - Lx7 LINE L1 -359 7337 7118 5 1301 320 349 94 6 chrX 93863811 93863981 -72786315 - MIRb SINE MIR -1 267 83 5 1301 6001 35 0 0 chrX 93865185 93865892 -72784404 - L1Md_T LINE L1 0 6582 5876 5 1301 180 0 0 0 chrX 93866259 93866279 -72784017 + (CAT)n Simple_repeat Simple_repeat 3 22 0 5 1301 225 0 0 0 chrX 93866279 93866304 -72783992 + (TAA)n Simple_repeat Simple_repeat 3 27 0 5 1301 1389 306 45 60 chrX 93866421 93866959 -72783337 - MT2A LTR ERVL 0 533 4 5 1301 180 352 32 54 chrX 93868396 93868489 -72781807 - L2b LINE L2 -176 3199 3109 5 1301 1074 260 108 24 chrX 93868707 93869078 -72781218 - MTD LTR MaLR 0 419 18 5 1301 311 0 26 0 chrX 93869576 93869615 -72780681 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 1301 532 198 274 24 chrX 93869616 93869864 -72780432 - Lx9 LINE L1 -22 7622 7313 5 1301 238 345 133 44 chrX 93869977 93870180 -72780116 + L2a LINE L2 3203 3423 -3 5 1301 277 345 26 9 chrX 93871198 93871312 -72778984 - ID_B1 SINE B4 -28 196 81 5 1301 663 255 132 38 chrX 93871607 93871925 -72778371 - Lx9 LINE L1 -25 7619 7272 5 1301 1305 294 47 11 chrX 93871936 93872386 -72777910 - Lx9 LINE L1 -760 6884 6419 5 1301 1463 213 149 27 chrX 93872699 93873309 -72776987 - Lx9 LINE L1 -1701 5943 5236 5 1301 274 141 13 53 chrX 93873297 93873372 -72776924 - Lx5 LINE L1 -1178 5872 5801 5 1301 8758 87 21 6 chrX 93873369 93875383 -72774913 - L1_Mus2 LINE L1 0 6566 4521 5 1301 6795 92 5 3 chrX 93875392 93876807 -72773489 - L1Md_F2 LINE L1 -19 6563 5146 5 1301 429 20 0 0 chrX 93876874 93876924 -72773372 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 1301 3599 52 2 0 chrX 93876930 93877373 -72772923 - L1Md_F2 LINE L1 -12 6570 6127 5 1301 2559 90 29 36 chrX 93877373 93877787 -72772509 + IAPLTR2a LTR ERVK 1 411 0 5 1301 311 57 37 19 chrX 93877789 93877843 -72772453 + IAPEz-int LTR ERVK 3 57 -1930 5 1301 3326 62 3 31 chrX 93877828 93878570 -72771726 + IAPEz-int LTR ERVK 18 662 -5819 5 1301 906 59 0 0 chrX 93878570 93878689 -72771607 + IAPEz-int LTR ERVK 1359 1477 -5004 5 1301 1771 99 8 0 chrX 93878684 93878936 -72771360 + IAPEz-int LTR ERVK 2244 2497 -5183 5 1301 932 79 0 0 chrX 93878933 93879059 -72771237 + IAPEz-int LTR ERVK 4785 4910 -2770 5 1301 25165 14 2 2 chrX 93879059 93882015 -72768281 + IAPEz-int LTR ERVK 3525 6481 0 5 1301 2546 93 29 36 chrX 93882015 93882429 -72767867 + IAPLTR2a LTR ERVK 1 411 0 5 1301 29123 119 13 3 chrX 93882429 93888072 -72762224 - L1Md_F2 LINE L1 -450 6132 509 5 1301 242 203 14 55 chrX 93888101 93888174 -72762122 - L1Md_F LINE L1 -5776 743 674 5 1301 611 273 77 96 chrX 93888179 93888491 -72761805 - L1VL1 LINE L1 -5926 496 191 5 1301 2548 195 179 7 chrX 93888497 93889249 -72761047 - L1_Mur3 LINE L1 -93 5787 4906 5 1301 659 134 0 0 chrX 93889249 93889346 -72760950 - RMER19B LTR ERVK -32 870 774 5 1301 286 232 54 0 chrX 93889345 93889401 -72760895 - RMER19B LTR ERVK -351 551 493 5 1301 5913 213 75 105 chrX 93889401 93890733 -72759563 - L1_Mur3 LINE L1 -2601 3279 1921 5 1301 324 236 75 75 chrX 93890733 93890786 -72759510 + CYRA11_Mm Unknown Y-chromosome 121 278 -337 5 1301 695 105 9 0 chrX 93890786 93890891 -72759405 - URR1B DNA MER1_type 0 225 120 5 1301 5913 213 75 105 chrX 93890893 93892644 -72757652 - L1_Mur3 LINE L1 -2601 1920 133 5 1301 1151 267 69 48 chrX 93892674 93892820 -72757476 - L1_Rod LINE L1 -2127 3720 3580 5 1301 787 75 0 16 chrX 93892820 93892942 -72757354 + (TTC)n Simple_repeat Simple_repeat 2 121 0 5 1301 1151 267 69 48 chrX 93892942 93893530 -72756766 - L1_Rod LINE L1 -2268 3579 2970 5 1301 1545 103 0 4 chrX 93893541 93893775 -72756521 + L1_Mus4 LINE L1 6404 6636 0 5 1301 999 84 14 7 chrX 93893778 93893921 -72756375 + B1_Mus2 SINE Alu 2 145 -2 5 1301 186 43 0 0 chrX 93893921 93893944 -72756352 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1301 578 293 42 62 chrX 93893954 93894147 -72756149 - B4 SINE B4 -103 189 1 5 1301 190 348 0 0 chrX 93894545 93894591 -72755705 + MIR SINE MIR 33 78 -130 5 1301 284 291 107 9 chrX 93894920 93895131 -72755165 + L1MD LINE L1 5541 5786 -573 5 1301 307 333 17 43 chrX 93895204 93895320 -72754976 - ID_B1 SINE B4 -7 217 105 5 1301 24 53 0 0 chrX 93895517 93895555 -72754741 + AT_rich Low_complexity Low_complexity 1 38 0 5 1301 258 302 31 19 chrX 93895640 93895802 -72754494 + L1MC4a LINE L1 7681 7844 -38 5 1301 6617 76 6 4 chrX 93895808 93896742 -72753554 - L1_Mus2 LINE L1 -9 6557 5622 5 1301 6005 101 9 0 chrX 93896737 93897640 -72752656 + L1_Mus2 LINE L1 4692 5602 -281 5 1301 394 331 56 28 chrX 93897774 93897954 -72752342 + MIRc SINE MIR 28 212 -56 5 1301 189 316 92 31 chrX 93898395 93898493 -72751803 + MIR SINE MIR 34 137 -71 5 1301 225 218 12 71 chrX 93899079 93899163 -72751133 - Lx9 LINE L1 -1409 6235 6157 5 1301 957 266 66 64 chrX 93899212 93899593 -72750703 + MTE2a LTR MaLR 20 413 -6 5 1301 298 366 23 15 chrX 93899557 93899690 -72750606 - MER5A1 DNA MER1_type -32 134 1 5 1301 327 355 25 25 chrX 93899965 93900205 -72750091 - MIRc SINE MIR -16 252 13 5 1301 981 272 97 0 chrX 93900991 93901248 -72749048 + B4A SINE B4 6 287 -5 5 1301 234 385 90 48 chrX 93901384 93901695 -72748601 + L2a LINE L2 3025 3348 -78 5 1301 788 266 116 114 chrX 93901954 93902332 -72747964 + MTD LTR MaLR 1 379 0 5 1301 298 390 75 0 chrX 93902394 93902553 -72747743 - MIR3 SINE MIR -6 202 32 5 1301 201 108 0 0 chrX 93903889 93903926 -72746370 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 5 1301 288 0 17 103 chrX 93904733 93904791 -72745505 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 5 1301 430 286 35 26 chrX 93906315 93906430 -72743866 + PB1D10 SINE Alu 2 117 0 5 1301 182 306 0 16 chrX 93906758 93906821 -72743475 - MIRb SINE MIR -96 172 111 5 1301 21 0 0 0 chrX 93906933 93906954 -72743342 + AT_rich Low_complexity Low_complexity 1 21 0 5 1301 552 30 0 0 chrX 93909212 93909278 -72741018 + (TTTC)n Simple_repeat Simple_repeat 2 67 0 5 1301 397 148 25 0 chrX 93912037 93912118 -72738178 + CT-rich Low_complexity Low_complexity 2 84 0 5 1301 251 356 6 12 chrX 93913638 93913803 -72736493 + CT-rich Low_complexity Low_complexity 2 165 0 5 1301 328 257 19 38 chrX 93914975 93915047 -72735249 + MamSINE1 SINE tRNA 1 70 -220 5 1301 410 365 88 40 chrX 93915047 93915298 -72734998 + MamSINE1 SINE tRNA 4 266 -24 5 1301 213 185 0 69 chrX 93915683 93915741 -72734555 + (CATATA)n Simple_repeat Simple_repeat 4 57 0 5 1301 864 149 150 58 chrX 93917650 93917714 -72732582 + URR1A DNA MER1_type 1 88 -138 5 1301 5142 112 35 9 chrX 93917714 93918526 -72731770 + Lx2 LINE L1 6152 6984 -13 5 1301 189 0 0 0 chrX 93918526 93918547 -72731749 + (CCA)n Simple_repeat Simple_repeat 2 22 0 5 1301 864 149 150 58 chrX 93918547 93918688 -72731608 + URR1A DNA MER1_type 89 225 -1 5 1301 411 260 75 84 chrX 93918688 93918787 -72731509 - CYRA11_Mm Unknown Y-chromosome -454 163 67 6 1301 7782 153 22 11 chrX 93918787 93920451 -72729845 - Lx4B LINE L1 -10 7048 5353 6 1301 378 229 8 32 chrX 93920674 93920800 -72729496 + Lx7 LINE L1 7569 7691 -5 6 1301 380 319 138 0 chrX 93920864 93921024 -72729272 - B3A SINE B2 -16 182 1 6 1301 985 283 28 85 chrX 93921072 93921442 -72728854 + MTE2a LTR MaLR 50 419 0 6 1301 21 36 0 0 chrX 93921558 93921586 -72728710 + AT_rich Low_complexity Low_complexity 1 28 0 6 1301 2536 182 39 28 chrX 93922021 93922209 -72728087 - ORR1B2-int LTR MaLR -990 519 338 6 1301 3092 47 42 0 chrX 93922209 93922589 -72727707 - MTA_Mm LTR MaLR 0 396 1 6 1301 8384 67 8 1 chrX 93922589 93923679 -72726617 - MTA_Mm-int LTR MaLR 0 1098 1 6 1301 3200 34 39 0 chrX 93923679 93924060 -72726236 - MTA_Mm LTR MaLR 0 396 1 6 1301 2536 182 39 28 chrX 93924060 93924376 -72725920 - ORR1B2-int LTR MaLR -1172 337 9 6 1301 266 200 0 0 chrX 93924378 93924428 -72725868 - ORR1B2 LTR MaLR 0 367 318 6 1301 43 20 0 0 chrX 93924564 93924614 -72725682 + AT_rich Low_complexity Low_complexity 1 50 0 6 1301 441 36 0 0 chrX 93924630 93924685 -72725611 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1301 1531 284 83 32 chrX 93924704 93925429 -72724867 - Lx9 LINE L1 -203 7441 6680 6 1301 2393 229 139 29 chrX 93925429 93926053 -72724243 - RMER13B LTR ERVK 0 908 216 6 1301 2434 95 27 27 chrX 93926284 93926653 -72723643 - L1Md_F2 LINE L1 0 6582 6214 6 1301 791 186 0 0 chrX 93926653 93926777 -72723519 - RMER13B LTR ERVK -719 141 18 6 1301 652 289 51 26 chrX 93926783 93927056 -72723240 - Lx9 LINE L1 -963 6681 6402 6 1301 3676 178 136 71 chrX 93927084 93927918 -72722378 + RMER19B LTR ERVK 1 888 -14 6 1301 1145 318 29 2 chrX 93927982 93928429 -72721867 + Lx8 LINE L1 6484 6942 -531 6 1301 647 301 35 0 chrX 93928506 93928649 -72721647 - RSINE1 SINE B4 -15 150 3 6 1301 24 32 0 0 chrX 93928675 93928706 -72721590 + AT_rich Low_complexity Low_complexity 1 31 0 6 1301 320 328 52 52 chrX 93930078 93930213 -72720083 + HAL1-3A_ME LINE L1 1975 2109 -749 6 1301 692 337 118 35 chrX 93930214 93930636 -72719660 - MLT2B1 LTR ERVL -53 503 1 6 1301 267 336 147 0 chrX 93930813 93930929 -72719367 + B4A SINE B4 16 148 -144 6 1301 464 48 16 0 chrX 93930938 93931001 -72719295 + (CATA)n Simple_repeat Simple_repeat 3 66 0 6 1301 27 29 0 0 chrX 93931019 93931053 -72719243 + AT_rich Low_complexity Low_complexity 1 34 0 6 1301 333 276 39 52 chrX 93931770 93931923 -72718373 + Lx8 LINE L1 6703 6853 -620 6 1301 291 316 0 0 chrX 93931926 93932002 -72718294 + CT-rich Low_complexity Low_complexity 1 76 0 6 1301 255 273 236 0 chrX 93932002 93932112 -72718184 + Lx8 LINE L1 6849 6984 -489 6 1301 954 318 25 30 chrX 93932215 93932620 -72717676 + Lx8 LINE L1 6922 7324 -149 6 1301 25 65 0 0 chrX 93932663 93932709 -72717587 + AT_rich Low_complexity Low_complexity 1 46 0 6 1301 2588 113 7 2 chrX 93932871 93933289 -72717007 - L1_Mur2 LINE L1 -1455 4422 4003 6 1301 298 349 9 9 chrX 93933488 93933595 -72716701 - MT2A LTR ERVL -352 181 75 6 1301 2713 192 243 44 chrX 93933728 93934164 -72716132 - RLTR40 LTR ERVK -91 726 205 6 1301 2148 123 3 69 chrX 93934164 93934514 -72715782 + ORR1A2 LTR MaLR 1 327 0 6 1301 9742 153 78 13 chrX 93934514 93936358 -72713938 + ORR1A2-int LTR MaLR 1 1963 0 6 1301 2169 116 28 3 chrX 93936358 93936677 -72713619 + ORR1A2 LTR MaLR 1 327 0 6 1301 2713 188 34 49 chrX 93936677 93936880 -72713416 - RLTR40 LTR ERVK -613 204 3 6 1301 328 253 53 0 chrX 93936992 93937087 -72713209 + Lx8 LINE L1 7022 7121 -352 6 1301 6557 220 103 33 chrX 93937143 93939277 -72711019 + Lx7 LINE L1 5402 7696 0 6 1301 284 309 43 0 chrX 93939764 93939926 -72710370 - L1M5 LINE L1 -296 5828 5660 6 1301 3452 23 2 0 chrX 93940611 93941006 -72709290 - MTA_Mm LTR MaLR 0 396 1 6 1301 356 223 26 133 chrX 93941006 93941270 -72709026 + L1_Rod LINE L1 827 1062 -6546 6 1301 4449 72 10 0 chrX 93941307 93941918 -72708378 - L1_Mus2 LINE L1 -192 6374 5758 6 1301 1570 73 0 80 chrX 93941921 93942158 -72708138 + L1_Mus2 LINE L1 6348 6565 -1 6 1301 2274 257 100 34 chrX 93942160 93942708 -72707588 + L1_Rod LINE L1 1487 2070 -3777 6 1301 3753 117 23 2 chrX 93942708 93943275 -72707021 + L1_Mus4 LINE L1 6058 6636 0 6 1301 2274 257 100 34 chrX 93943275 93943834 -72706462 + L1_Rod LINE L1 2071 2667 -3180 6 1301 2722 84 2 15 chrX 93943822 93944219 -72706077 + Lx3A LINE L1 5061 5452 -434 6 1301 3621 105 13 28 chrX 93944220 93944760 -72705536 + L1_Mus4 LINE L1 6086 6617 -19 6 1301 257 0 0 0 chrX 93944783 93944822 -72705474 + L1_Mus4 LINE L1 6592 6630 -6 6 1301 9089 100 28 3 chrX 93944863 93946339 -72703957 + Lx3A LINE L1 5456 6971 -10 6 1301 330 26 0 0 chrX 93946340 93946379 -72703917 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 6 1301 284 194 50 61 chrX 93946379 93946478 -72703818 + L1_Rod LINE L1 3490 3587 -2260 6 1301 705 110 0 0 chrX 93946605 93946714 -72703582 + (CA)n Simple_repeat Simple_repeat 2 110 0 6 1301 1350 264 122 12 chrX 93946765 93947190 -72703106 + Lx9 LINE L1 6392 6863 -781 6 1301 957 248 9 9 chrX 93947422 93947634 -72702662 - B3 SINE B2 -2 214 3 6 1301 1331 252 73 0 chrX 93947780 93948082 -72702214 - Lx5 LINE L1 -9 7041 6718 6 1301 4685 200 39 8 chrX 93948075 93948872 -72701424 - Lx5 LINE L1 -500 6550 5745 6 1301 5023 81 31 10 chrX 93948872 93949579 -72700717 - L1_Mus4 LINE L1 0 6636 5915 6 1301 4685 154 51 0 chrX 93949579 93949896 -72700400 - Lx5 LINE L1 -1306 5744 5402 6 1301 392 278 79 30 chrX 93950076 93950266 -72700030 - ORR1D2 LTR MaLR 0 379 163 6 1301 854 289 41 14 chrX 93950272 93950637 -72699659 - Lx9 LINE L1 0 7644 7270 6 1301 1416 246 35 8 chrX 93950683 93951052 -72699244 - Lx9 LINE L1 -595 7049 6671 6 1301 270 116 0 0 chrX 93951152 93951195 -72699101 + (CAGAGA)n Simple_repeat Simple_repeat 3 45 0 6 1301 932 244 70 128 chrX 93951195 93951524 -72698772 - MT2A LTR ERVL -223 310 1 6 1301 32385 161 33 16 chrX 93951524 93957191 -72693105 - MERVL_2A-int LTR ERVL 0 5761 1 6 1301 698 282 128 97 chrX 93957191 93957663 -72692633 - MT2A LTR ERVL 0 601 6 6 1301 730 312 12 20 chrX 93957665 93957920 -72692376 - Lx9 LINE L1 -986 6658 6406 6 1301 946 122 0 27 chrX 93957932 93958117 -72692179 + (TTC)n Simple_repeat Simple_repeat 1 180 0 6 1301 1757 262 46 33 chrX 93958293 93959061 -72691235 - Lx9 LINE L1 -1526 6118 5316 6 1301 441 231 43 43 chrX 93959057 93959197 -72691099 - Lx9 LINE L1 -663 5184 5045 6 1301 512 340 26 0 chrX 93959197 93959353 -72690943 - ORR1D2 LTR MaLR -210 160 1 6 1301 261 0 0 0 chrX 93959760 93959789 -72690507 + (TA)n Simple_repeat Simple_repeat 2 30 0 6 1301 1402 76 0 48 chrX 93959910 93960118 -72690178 + L1_Mus2 LINE L1 6369 6566 0 6 1301 666 284 87 11 chrX 93960242 93960506 -72689790 - L1M2 LINE L1 -523 5777 5494 6 1301 429 282 15 42 chrX 93960516 93960726 -72689570 - L1M2 LINE L1 -874 5269 5045 6 1301 497 292 32 5 chrX 93960794 93961014 -72689282 + L1_Mur3 LINE L1 3356 3581 -2299 6 1301 2056 100 0 10 chrX 93961027 93961329 -72688967 + BGLII LTR ERVK 1 299 -122 6 1301 3970 62 10 0 chrX 93961329 93961827 -72688469 - RLTR1C LTR ERV1 0 503 1 6 1301 6598 76 2 7 chrX 93961831 93962694 -72687602 + L1Md_F2 LINE L1 5703 6561 -21 6 1301 825 107 0 0 chrX 93962714 93962836 -72687460 + BGLII LTR ERVK 300 421 0 6 1301 866 267 40 6 chrX 93962842 93963166 -72687130 + L1_Mur3 LINE L1 3594 3928 -1952 6 1301 1535 211 84 3 chrX 93963167 93963499 -72686797 + Lx9 LINE L1 6383 6741 -903 6 1301 1174 307 51 29 chrX 93963632 93963775 -72686521 + MTD LTR MaLR 1 148 -271 6 1301 3453 128 151 21 chrX 93963775 93963992 -72686304 - RMER6A LTR ERVK 0 756 504 6 1301 690 13 0 0 chrX 93963992 93964071 -72686225 + (TC)n Simple_repeat Simple_repeat 1 79 0 6 1301 3453 128 151 21 chrX 93964071 93964522 -72685774 - RMER6A LTR ERVK -253 503 1 6 1301 1174 307 51 29 chrX 93964522 93964788 -72685508 + MTD LTR MaLR 149 419 0 6 1301 307 282 8 33 chrX 93964788 93964909 -72685387 + MTD-int LTR MaLR 1 118 -1140 6 1301 969 279 87 33 chrX 93964906 93965319 -72684977 + MTD-int LTR MaLR 345 901 -357 6 1301 1319 203 216 58 chrX 93965319 93965805 -72684491 - RMER2 LTR ERV1 -4 563 1 6 1301 969 282 193 17 chrX 93965805 93966113 -72684183 + MTD-int LTR MaLR 902 1253 -5 6 1301 1310 267 62 18 chrX 93966122 93966507 -72683789 + MTD LTR MaLR 4 405 -14 6 1301 656 191 13 7 chrX 93966518 93966671 -72683625 - L1M2 LINE L1 -1581 4562 4409 6 1301 21 0 0 0 chrX 93966776 93966797 -72683499 + AT_rich Low_complexity Low_complexity 1 21 0 6 1301 23 33 0 0 chrX 93966886 93966916 -72683380 + AT_rich Low_complexity Low_complexity 1 30 0 6 1301 22 0 0 0 chrX 93967176 93967198 -72683098 + AT_rich Low_complexity Low_complexity 1 22 0 6 1301 759 271 33 33 chrX 93967207 93967417 -72682879 + B3 SINE B2 7 216 0 6 1301 2935 135 52 8 chrX 93967639 93968117 -72682179 + RLTR19 LTR ERVK 1 499 0 6 1301 4026 129 114 12 chrX 93968501 93969170 -72681126 + RMER19A LTR ERVK 1 737 0 6 1301 279 0 0 0 chrX 93970296 93970327 -72679969 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 1301 1081 87 0 0 chrX 93970327 93970465 -72679831 - B1_Mus1 SINE Alu -10 138 1 6 1301 479 318 109 50 chrX 93971519 93971996 -72678300 - L1M4c LINE L1 -5362 1972 1479 6 1301 396 0 0 0 chrX 93972004 93972048 -72678248 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 1301 489 47 0 0 chrX 93972048 93972111 -72678185 + (CA)n Simple_repeat Simple_repeat 1 64 0 6 1301 387 175 41 0 chrX 93972111 93972208 -72678088 + Lx9 LINE L1 7537 7637 -7 6 1301 930 264 7 37 chrX 93972249 93972520 -72677776 + Lx7 LINE L1 6836 7098 -598 6 1301 423 145 0 0 chrX 93972732 93972815 -72677481 + (TA)n Simple_repeat Simple_repeat 1 83 0 6 1301 378 343 22 7 chrX 93973681 93973819 -72676477 + B1F SINE Alu 7 146 -3 6 1301 1049 97 0 0 chrX 93974078 93974223 -72676073 + B1_Mm SINE Alu 3 147 0 6 1301 1355 82 0 11 chrX 93974528 93974713 -72675583 - L1_Mus1 LINE L1 -1 6566 6384 6 1301 1062 178 37 5 chrX 93974877 93975091 -72675205 - URR1B DNA MER1_type 0 225 5 6 1301 607 314 130 11 chrX 93975723 93976283 -72674013 + L1M2c LINE L1 1386 2012 -4777 6 162 15742 132 13 14 chrX 93976461 93979087 -72671209 - L1_Mus3 LINE L1 0 6638 4018 6 1302 1194 68 0 0 chrX 93979087 93979234 -72671062 - B1_Mm SINE Alu 0 147 1 6 1302 15742 147 15 21 chrX 93979234 93980095 -72670201 - L1_Mus3 LINE L1 -1866 4017 3153 6 1302 2904 104 72 11 chrX 93980095 93980551 -72669745 - L1Md_F2 LINE L1 0 6582 6099 6 1302 15742 109 8 8 chrX 93980551 93980665 -72669631 - L1_Mus3 LINE L1 -2731 3152 3123 6 1302 2582 240 26 28 chrX 93980635 93981326 -72668970 - L1VL4 LINE L1 -5448 854 165 6 1302 5359 152 13 17 chrX 93981813 93982352 -72667944 + Lx5 LINE L1 4795 5331 -546 6 1302 4655 77 0 11 chrX 93982352 93982440 -72667856 - L1_Mus1 LINE L1 -1 6566 6484 6 1302 2988 83 2 2 chrX 93982440 93982836 -72667460 + MTA_Mm LTR MaLR 1 396 0 6 1302 4655 77 0 11 chrX 93982836 93983367 -72666929 - L1_Mus1 LINE L1 -84 6483 5954 6 1302 5359 152 13 17 chrX 93983367 93983781 -72666515 + Lx5 LINE L1 5332 5744 -133 6 1302 25308 95 115 8 chrX 93983782 93988505 -72661791 + L1Md_F2 LINE L1 411 5637 -246 6 1302 5130 89 19 4 chrX 93988506 93989229 -72661067 + L1Md_F2 LINE L1 5830 6563 -19 6 1302 3354 216 108 4 chrX 93989235 93990033 -72660263 + Lx5 LINE L1 5741 6621 -429 6 1302 3259 216 51 8 chrX 93990030 93990992 -72659304 - L1_Mur3 LINE L1 -4333 1547 543 6 1302 21 0 0 0 chrX 93991686 93991707 -72658589 + AT_rich Low_complexity Low_complexity 1 21 0 6 1302 681 101 10 0 chrX 93991760 93991859 -72658437 - B1_Mus2 SINE Alu -1 146 47 6 1302 309 247 0 73 chrX 93991802 93991898 -72658398 - RLTR25B LTR ERVK -526 502 414 6 1302 262 390 0 48 chrX 93992989 93993156 -72657140 - MIR SINE MIR -99 163 5 6 1302 263 45 0 0 chrX 93993286 93993330 -72656966 - Lx LINE L1 0 6654 6611 6 1302 203 0 37 0 chrX 93993416 93993443 -72656853 + (CAA)n Simple_repeat Simple_repeat 2 29 0 6 1302 1333 317 143 19 chrX 93993507 93994199 -72656097 + Lx8 LINE L1 6423 7200 -273 6 1302 360 0 0 0 chrX 93994201 93994241 -72656055 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1302 254 26 0 50 chrX 93994241 93994280 -72656016 + (CAGAGA)n Simple_repeat Simple_repeat 5 42 0 6 1302 1965 271 75 25 chrX 93995059 93995726 -72654570 - Lx7 LINE L1 -1026 6670 5971 6 1302 520 289 13 70 chrX 93995727 93995954 -72654342 + Lx7 LINE L1 7082 7295 -401 7 1302 7780 47 1 0 chrX 93996549 93997507 -72652789 + L1Md_F2 LINE L1 4628 5586 -297 7 1302 7922 53 1 1 chrX 93997507 93998491 -72651805 + L1Md_F2 LINE L1 5587 6570 -12 7 1302 374 311 97 11 chrX 93998508 93998765 -72651531 + L1MB1 LINE L1 5815 6092 -97 7 1302 1882 145 74 16 chrX 93998783 93999147 -72651149 - Lx LINE L1 0 6654 6270 7 1302 4865 120 10 6 chrX 93999272 94000000 -72650296 - L1_Mus3 LINE L1 -13 6625 5895 7 1302 5355 124 28 18 chrX 94000014 94000916 -72649380 - L1_Mm LINE L1 -3 5880 4970 1 1302 12907 144 24 10 chrX 94000913 94001072 -72649224 + L1_Mur2 LINE L1 1897 2051 -3826 2 1302 414 0 0 0 chrX 94001072 94001118 -72649178 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 1302 279 0 0 0 chrX 94001125 94001156 -72649140 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1302 12907 144 24 10 chrX 94001156 94003345 -72646951 + L1_Mur2 LINE L1 2059 4268 -1609 2 1302 281 47 23 0 chrX 94003345 94003388 -72646908 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 5 1302 12907 144 24 10 chrX 94003388 94003534 -72646762 + L1_Mur2 LINE L1 4269 4433 -1444 2 1302 1225 220 27 17 chrX 94003534 94003826 -72646470 + Lx4B LINE L1 6764 7058 0 6 1302 1114 149 16 5 chrX 94004307 94004496 -72645800 - B2_Mm2 SINE B2 -2 193 3 7 1302 568 355 40 15 chrX 94004521 94004847 -72645449 + L1M3b LINE L1 307 640 -5641 8 1302 7107 116 23 3 chrX 94005360 94006404 -72643892 - L1_Mm LINE L1 -83 5800 4734 9 1302 180 0 0 0 chrX 94006404 94006424 -72643872 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 1302 252 0 0 0 chrX 94006424 94006452 -72643844 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1302 7107 116 23 3 chrX 94006452 94006540 -72643756 - L1_Mm LINE L1 -1150 4733 4646 9 1302 5353 101 19 1 chrX 94006541 94007314 -72642982 + L1_Mus2 LINE L1 5780 6566 0 1 1302 513 288 71 24 chrX 94007508 94007803 -72642493 + L1MA7 LINE L1 5699 6007 -284 1 1302 20204 154 12 55 chrX 94008040 94010752 -72639544 + L1Md_F LINE L1 399 3140 -2746 1 1302 1070 199 143 31 chrX 94010752 94011044 -72639252 - IAPEY3_LTR LTR ERVK -128 283 1 1 1302 20204 154 12 55 chrX 94011044 94013458 -72636838 + L1Md_F LINE L1 3141 5582 -304 1 1302 8136 36 8 3 chrX 94013465 94014452 -72635844 + L1Md_F2 LINE L1 5587 6578 -4 1 1302 21 36 0 0 chrX 94014527 94014555 -72635741 + AT_rich Low_complexity Low_complexity 1 28 0 1 1302 434 293 6 0 chrX 94014585 94014766 -72635530 - L1_Mur3 LINE L1 -1226 4654 4473 1 1302 6471 111 14 0 chrX 94014772 94015832 -72634464 - L1_Mus4 LINE L1 -4 6632 5552 1 1302 2453 245 33 31 chrX 94015844 94016451 -72633845 + ORR1C2-int LTR MaLR 641 1248 -122 2 1302 730 223 142 20 chrX 94016447 94016644 -72633652 + ORR1C2 LTR MaLR 164 384 0 2 1302 2231 235 12 19 chrX 94016644 94017234 -72633062 - L1_Mur3 LINE L1 -208 5672 5087 2 1302 4048 268 74 21 chrX 94017226 94017764 -72632532 - Lx6 LINE L1 -5 7455 6897 2 1302 636 14 0 0 chrX 94017764 94017837 -72632459 + (TC)n Simple_repeat Simple_repeat 2 74 0 2 1302 4048 268 74 21 chrX 94017837 94018600 -72631696 - Lx6 LINE L1 -564 6896 6087 2 1302 3744 182 47 2 chrX 94018602 94018911 -72631385 + L1_Mur3 LINE L1 4843 5171 -709 2 1302 3145 65 5 5 chrX 94018911 94019326 -72630970 + L1Md_F2 LINE L1 6165 6579 -3 2 1302 3744 182 47 2 chrX 94019326 94019829 -72630467 + L1_Mur3 LINE L1 5172 5690 -190 2 1302 929 280 62 0 chrX 94019838 94020174 -72630122 - L1_Mur3 LINE L1 -1436 4444 4088 2 1302 2167 109 22 0 chrX 94020178 94020490 -72629806 - ORR1A2 LTR MaLR -8 319 1 2 1302 1057 279 45 71 chrX 94020494 94021261 -72629035 - L1_Mur3 LINE L1 -1834 4046 3320 2 1302 7170 61 16 1 chrX 94021258 94022233 -72628063 - L1_Mus1 LINE L1 0 6567 5570 2 1302 2293 81 3 3 chrX 94022234 94022568 -72627728 + L1_Mus1 LINE L1 5243 5576 -307 2 1302 602 218 23 62 chrX 94022573 94022832 -72627464 - L1_Mur3 LINE L1 -2555 3325 3077 2 1302 227 272 0 100 chrX 94022856 94022946 -72627350 + Lx8 LINE L1 6549 6629 -844 2 1302 479 341 34 5 chrX 94022967 94023173 -72627123 + Lx8 LINE L1 7104 7315 -158 2 1302 36253 29 0 0 chrX 94023180 94029644 -72620652 - L1Md_T LINE L1 0 6585 24 2 1302 267 164 0 16 chrX 94029727 94029789 -72620507 + Lx8 LINE L1 7413 7473 0 3 1302 472 280 54 38 chrX 94029865 94030117 -72620179 - L1M2 LINE L1 -1521 4622 4363 3 1302 558 0 0 0 chrX 94030117 94030179 -72620117 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 1302 472 280 54 38 chrX 94030179 94030242 -72620054 - L1M2 LINE L1 -1781 4362 4302 3 1302 936 356 29 5 chrX 94030821 94031242 -72619054 - Lx8 LINE L1 -153 7320 6890 3 1302 743 282 48 6 chrX 94031256 94031570 -72618726 - L1_Mur3 LINE L1 -1869 4011 3685 3 1302 380 343 66 103 chrX 94031599 94031704 -72618592 - B4 SINE B4 0 292 203 3 1302 234 0 0 0 chrX 94031704 94031730 -72618566 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 3 1302 380 343 66 103 chrX 94031730 94031926 -72618370 - B4 SINE B4 -90 202 2 3 1302 2191 236 11 80 chrX 94032091 94032617 -72617679 + RLTR18B LTR ERVK 1 490 -22 3 1302 25 83 0 0 chrX 94032713 94032773 -72617523 + AT_rich Low_complexity Low_complexity 1 60 0 3 1302 368 311 112 50 chrX 94032782 94033189 -72617107 + L1M2 LINE L1 5303 5738 -562 3 1302 760 180 162 20 chrX 94033189 94033387 -72616909 + URR1A DNA MER1_type 1 226 0 4 1302 368 324 52 50 chrX 94033387 94033443 -72616853 + L1M2 LINE L1 5739 5795 -505 3 1302 22 35 0 0 chrX 94033484 94033513 -72616783 + AT_rich Low_complexity Low_complexity 1 29 0 4 1302 2206 187 74 16 chrX 94033936 94034436 -72615860 - RLTR24 LTR ERV1 0 529 1 4 1302 203 241 35 0 chrX 94034792 94034850 -72615446 + (CAAA)n Simple_repeat Simple_repeat 1 60 0 4 1302 213 226 7 82 chrX 94035016 94035151 -72615145 + T-rich Low_complexity Low_complexity 3 127 0 4 1302 773 87 0 1 chrX 94035242 94035361 -72614935 - L1_Mus1 LINE L1 -1036 6022 5904 4 1302 4307 75 2 0 chrX 94035361 94035919 -72614377 + L1_Mus1 LINE L1 6007 6565 -2 4 1302 238 333 0 14 chrX 94035919 94035939 -72614357 - L1_Mus1 LINE L1 -1154 5904 5885 4 1302 977 233 264 1 chrX 94036674 94037050 -72613246 - L1VL2 LINE L1 -5935 400 52 4 1302 712 215 0 25 chrX 94037057 94037253 -72613043 + L1_Mur3 LINE L1 2120 2310 -3570 4 1302 1557 182 172 0 chrX 94037263 94037576 -72612720 + ORR1B2 LTR MaLR 1 367 0 4 1302 5418 199 69 84 chrX 94037576 94039106 -72611190 + ORR1B2-int LTR MaLR 4 1509 0 4 1302 1719 192 89 9 chrX 94039106 94039442 -72610854 + ORR1B2 LTR MaLR 1 363 -4 4 1302 1790 212 86 50 chrX 94039450 94040065 -72610231 + L1_Mur3 LINE L1 2317 2953 -2927 4 1302 648 272 0 0 chrX 94040061 94040223 -72610073 + Lx7 LINE L1 6903 7064 -632 4 1302 2689 173 199 19 chrX 94040223 94040842 -72609454 + RMER19B LTR ERVK 1 730 -172 5 1302 2628 153 63 32 chrX 94040842 94041369 -72608927 + RLTR13D1 LTR ERVK 1 543 -359 5 1302 3859 95 23 12 chrX 94041342 94041916 -72608380 + RLTR13D1 LTR ERVK 227 806 0 5 1302 834 147 72 60 chrX 94041916 94042049 -72608247 + RMER19B LTR ERVK 725 869 -33 5 1302 3782 47 4 2 chrX 94042049 94042515 -72607781 + L1Md_F3 LINE L1 6117 6583 -1 5 1302 834 147 72 60 chrX 94042515 94042545 -72607751 + RMER19B LTR ERVK 870 890 -12 5 1302 1299 247 65 13 chrX 94042558 94042943 -72607353 + Lx7 LINE L1 7059 7463 -233 4 1302 528 280 98 41 chrX 94043024 94043365 -72606931 + RMER20B LTR ERVK 55 413 -103 5 1302 846 203 62 31 chrX 94043484 94043708 -72606588 + Lx7 LINE L1 7460 7690 -6 4 1302 319 362 38 14 chrX 94043748 94043961 -72606335 + L1MDa LINE L1 1737 1954 -4679 5 1302 442 281 77 46 chrX 94044369 94044735 -72605561 - Lx9 LINE L1 -9 7635 7259 5 1302 1461 300 114 19 chrX 94044767 94045449 -72604847 - Lx9 LINE L1 -452 7192 6446 5 1302 24 32 0 0 chrX 94045463 94045494 -72604802 + AT_rich Low_complexity Low_complexity 1 31 0 5 1302 1321 352 32 12 chrX 94045656 94046348 -72603948 - Lx8 LINE L1 -317 7156 6451 5 1302 699 312 15 0 chrX 94046390 94046653 -72603643 + L1_Mur3 LINE L1 5545 5811 -69 5 1302 21 0 0 0 chrX 94047686 94047707 -72602589 + AT_rich Low_complexity Low_complexity 1 21 0 5 1302 919 242 174 9 chrX 94048105 94048426 -72601870 - ORR1D1 LTR MaLR 0 374 1 6 1302 477 337 6 28 chrX 94048896 94049003 -72601293 - Lx8 LINE L1 -155 7318 7215 6 1302 2479 131 24 10 chrX 94049003 94049419 -72600877 - BGLII_Mus LTR ERVK 0 422 1 6 1302 477 337 6 28 chrX 94049419 94049491 -72600805 - Lx8 LINE L1 -259 7214 7143 6 1302 1268 99 0 0 chrX 94049572 94049754 -72600542 - L1_Mus2 LINE L1 -1 6565 6384 6 1302 9519 124 1 47 chrX 94049782 94051771 -72598525 - L1VL4 LINE L1 -3087 2796 928 6 1302 1578 126 41 56 chrX 94051771 94052091 -72598205 - RLTR10A LTR ERVK 0 411 97 6 1302 3091 81 16 13 chrX 94052121 94052608 -72597688 - RLTR10-int LTR ERVK -248 1739 1284 6 1302 1505 76 5 0 chrX 94052697 94052894 -72597402 - IAP-d-int LTR ERVK -217 6325 6128 6 1302 757 67 0 0 chrX 94052897 94053002 -72597294 - IAP-d-int LTR ERVK -521 6021 5917 6 1302 1806 39 171 0 chrX 94053045 94053397 -72596899 - IAP-d-int LTR ERVK -1124 5418 5006 6 1302 380 214 45 0 chrX 94053397 94053486 -72596810 - IAP-d-int LTR ERVK -6040 502 410 6 1302 329 91 0 0 chrX 94053485 94053529 -72596767 - IAP-d-int LTR ERVK -6393 149 106 6 1302 906 43 0 0 chrX 94053529 94053644 -72596652 - IAP-d-int LTR ERVK -6387 155 41 6 1302 1109 127 0 23 chrX 94053925 94054102 -72596194 - RLTR10-int LTR ERVK -1511 476 304 6 1302 1336 120 180 0 chrX 94054104 94054354 -72595942 - RLTR10A LTR ERVK 0 411 117 6 1302 1162 198 11 11 chrX 94054422 94054688 -72595608 - L1VL4 LINE L1 -5684 932 667 6 1302 879 242 0 96 chrX 94054781 94055120 -72595176 - L1VL1 LINE L1 -5922 500 3 6 1302 440 305 39 22 chrX 94055134 94055312 -72594984 - Lx8 LINE L1 -469 7004 6824 6 1302 187 200 29 0 chrX 94055761 94055796 -72594500 - L2c LINE L2 -384 3003 2968 6 1302 578 335 9 18 chrX 94056047 94056269 -72594027 - ID_B1 SINE B4 -2 222 3 7 1302 7503 145 39 34 chrX 94056463 94057991 -72592305 + Lx5 LINE L1 3026 4560 -1317 7 1302 407 207 0 0 chrX 94057994 94058081 -72592215 + Lx5 LINE L1 5174 5260 -617 7 1302 5556 92 13 61 chrX 94058081 94058627 -72591669 + L1Md_A LINE L1 422 973 -5751 7 1302 3092 50 0 0 chrX 94058627 94059004 -72591292 + L1Md_T LINE L1 6206 6582 0 7 1302 7822 52 3 13 chrX 94059004 94060345 -72589951 + L1Md_A LINE L1 974 2262 -3621 7 1302 6586 55 1 0 chrX 94060341 94061207 -72589089 + L1Md_A LINE L1 5003 5869 -14 7 1302 22961 44 4 2 chrX 94061225 94064232 -72586064 - L1_Mm LINE L1 -632 5251 2239 7 1302 792 177 53 114 chrX 94064687 94064949 -72585347 + RLTR42-int LTR ERVK 1874 2119 -3403 7 1302 567 254 108 46 chrX 94064948 94065237 -72585059 + RLTR19-int LTR ERVK 7271 7506 -1453 7 1302 808 223 157 108 chrX 94065623 94066362 -72583934 + RLTR19-int LTR ERVK 3192 3966 -2171 7 1302 335 324 63 23 chrX 94066561 94066782 -72583514 + RLTR19-int LTR ERVK 4846 5075 -1475 7 1302 6559 193 44 4 chrX 94066869 94068186 -72582110 + Lx5 LINE L1 5678 7047 -3 7 1302 1367 236 53 38 chrX 94068196 94068589 -72581707 + RMER10A LTR ERVL 44 442 0 7 1302 1035 259 67 61 chrX 94068759 94069134 -72581162 + MTE2b LTR MaLR 1 377 -2 7 1302 459 337 61 32 chrX 94069574 94069853 -72580443 - Lx8 LINE L1 -2 7471 7185 7 1302 762 273 48 24 chrX 94069880 94070128 -72580168 - Lx8 LINE L1 -450 7023 6770 7 1302 939 254 75 20 chrX 94070133 94070426 -72579870 - Lx8 LINE L1 -907 6566 6258 7 1302 954 275 129 24 chrX 94070914 94071286 -72579010 - Lx8 LINE L1 -1674 5970 5566 7 1302 261 0 0 0 chrX 94071286 94071315 -72578981 + (TG)n Simple_repeat Simple_repeat 1 29 0 8 1302 954 274 124 30 chrX 94071315 94071599 -72578697 - Lx8 LINE L1 -315 5565 5259 7 1302 1318 303 44 19 chrX 94071607 94072176 -72578120 - Lx8 LINE L1 -10 7463 6881 8 1302 405 0 0 0 chrX 94072337 94072382 -72577914 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 1302 704 331 66 28 chrX 94072554 94073173 -72577123 - Lx8 LINE L1 -623 5257 4615 7 1302 38 22 0 0 chrX 94073205 94073250 -72577046 + AT_rich Low_complexity Low_complexity 1 45 0 8 1302 2953 226 17 51 chrX 94073433 94074185 -72576111 + RMER1C Other Other 295 1342 0 8 1302 3663 134 21 2 chrX 94074740 94075352 -72574944 + L1_Mur1 LINE L1 5263 5886 0 8 1302 3207 46 5 2 chrX 94075371 94075765 -72574531 + MTA_Mm LTR MaLR 2 396 0 8 1302 7741 76 8 16 chrX 94075765 94076811 -72573485 + MTA_Mm-int LTR MaLR 1 1042 -56 8 1302 2461 43 7 0 chrX 94076811 94077115 -72573181 + L1Md_A LINE L1 6277 6582 0 8 1302 7741 76 8 16 chrX 94077115 94077175 -72573121 + MTA_Mm-int LTR MaLR 1043 1098 0 8 1302 3167 56 2 2 chrX 94077175 94077571 -72572725 + MTA_Mm LTR MaLR 1 396 0 8 1302 5903 125 70 19 chrX 94077572 94078589 -72571707 + Lx3B LINE L1 5898 6966 -7 8 1302 266 229 36 12 chrX 94078661 94078745 -72571551 + L1MA5 LINE L1 6211 6296 -4 8 1302 6659 49 1 2 chrX 94078835 94079656 -72570640 - L1Md_F2 LINE L1 -12 6570 5751 9 1302 376 252 61 0 chrX 94079664 94079763 -72570533 - MIR SINE MIR -58 204 100 9 1302 1205 69 74 17 chrX 94079818 94079994 -72570302 + B2_Mm2 SINE B2 2 187 -8 9 1302 496 365 110 15 chrX 94080079 94080405 -72569891 + MLT1A0 LTR MaLR 1 357 -8 9 1302 21 0 0 0 chrX 94080741 94080762 -72569534 + AT_rich Low_complexity Low_complexity 1 21 0 9 1302 3367 145 21 3 chrX 94081424 94081991 -72568305 - L1_Mus4 LINE L1 0 6636 6060 9 1302 5411 113 9 3 chrX 94081992 94083121 -72567175 + L1_Mus4 LINE L1 4973 6110 -528 9 1302 21249 107 12 25 chrX 94083318 94087641 -72562655 - L1_Mus1 LINE L1 0 6567 2311 9 1302 574 82 93 0 chrX 94087636 94087733 -72562563 - L1_Mm LINE L1 -3253 2630 2525 9 1302 5040 99 67 7 chrX 94087734 94088282 -72562014 + RLTR13C2 LTR ERVK 1 587 -221 9 1302 1222 82 6 0 chrX 94088282 94088464 -72561832 + L1_Mus3 LINE L1 6400 6582 0 9 1302 5040 99 67 7 chrX 94088464 94088677 -72561619 + RLTR13C2 LTR ERVK 588 807 -1 9 1302 4806 122 11 10 chrX 94088680 94089560 -72560736 - L1_Mm LINE L1 -3358 2528 1572 9 1302 8875 60 8 1 chrX 94089562 94091491 -72558805 - L1Md_F2 LINE L1 -2 6580 4646 1 1302 5274 75 0 4 chrX 94091489 94092242 -72558054 + L1Md_F2 LINE L1 3920 4669 -1214 1 1302 6456 106 8 4 chrX 94092238 94093475 -72556821 - L1VL1 LINE L1 -2323 1375 134 1 1302 347 281 74 17 chrX 94093553 94093850 -72556446 - L1M4 LINE L1 -931 5215 4902 1 1302 392 356 90 19 chrX 94093924 94094190 -72556106 - L1M4 LINE L1 -1378 4768 4484 1 1302 180 0 0 0 chrX 94094220 94094240 -72556056 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 1 1302 4259 196 29 29 chrX 94094566 94095573 -72554723 + Lx2B LINE L1 5974 6980 -20 1 1302 2776 48 3 6 chrX 94095669 94096023 -72554273 + L1Md_F2 LINE L1 6226 6578 -4 1 1302 268 323 31 31 chrX 94096367 94096463 -72553833 - L2a LINE L2 -16 3410 3315 1 1302 5804 132 38 12 chrX 94097068 94098010 -72552286 - Lx3C LINE L1 -8 6968 6002 1 1302 3587 119 35 9 chrX 94098012 94098644 -72551652 + Lx3C LINE L1 5329 5974 -1002 1 1302 549 110 0 0 chrX 94098702 94098784 -72551512 + (TA)n Simple_repeat Simple_repeat 1 82 0 1 1302 26 50 0 0 chrX 94098839 94098879 -72551417 + AT_rich Low_complexity Low_complexity 1 40 0 1 1302 1038 104 0 0 chrX 94099176 94099330 -72550966 + (TTTC)n Simple_repeat Simple_repeat 3 156 0 1 1302 863 65 98 0 chrX 94099330 94099453 -72550843 - B1_Mus2 SINE Alu -12 135 1 1 1302 1178 95 104 57 chrX 94100611 94100822 -72549474 - RMER19A LTR ERVK -18 719 499 1 1302 225 0 0 0 chrX 94100828 94100853 -72549443 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1302 5579 66 10 32 chrX 94101245 94102016 -72548280 + L1_Mus2 LINE L1 5813 6566 0 1 1302 1224 78 0 0 chrX 94102178 94102344 -72547952 - L1_Mus2 LINE L1 0 6566 6401 1 1302 1546 75 0 4 chrX 94102344 94102570 -72547726 + L1_Mus2 LINE L1 5857 6081 -485 1 1302 514 294 187 18 chrX 94102596 94102827 -72547469 + B4 SINE B4 1 270 -22 1 1302 507 297 6 77 chrX 94102890 94103013 -72547283 + Lx6 LINE L1 5323 5471 -409 1 1302 1516 60 60 0 chrX 94103013 94103213 -72547083 + L1_Mus1 LINE L1 6356 6567 0 1 1302 550 312 89 52 chrX 94103213 94103681 -72546615 + Lx6 LINE L1 5443 5915 -1781 1 1302 2327 247 51 80 chrX 94103890 94104669 -72545627 + Lx6 LINE L1 6505 7261 -199 1 1302 350 292 19 0 chrX 94104690 94104796 -72545500 + Lx7 LINE L1 7189 7296 -400 1 1302 348 24 0 0 chrX 94104868 94104909 -72545387 + (GGA)n Simple_repeat Simple_repeat 2 42 0 1 1302 2526 276 69 13 chrX 94105088 94105987 -72544309 + Lx8 LINE L1 6080 7028 -445 1 1302 435 52 0 0 chrX 94107285 94107343 -72542953 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 1302 21 36 0 0 chrX 94107432 94107460 -72542836 + AT_rich Low_complexity Low_complexity 1 28 0 1 1302 666 325 20 8 chrX 94107899 94108150 -72542146 - Lx9 LINE L1 -870 6774 6521 1 162 9493 128 16 7 chrX 94108189 94109779 -72540517 + L1_Mm LINE L1 4060 5664 -219 1 1303 4119 189 65 40 chrX 94109779 94110734 -72539562 + RLTR13C1 LTR ERVK 1 979 -4 1 1303 5293 88 4 0 chrX 94110737 94111490 -72538806 + L1_Mus3 LINE L1 5659 6414 -224 1 1303 404 319 0 22 chrX 94112113 94112251 -72538045 - Lx8 LINE L1 -452 7021 6887 1 1303 4972 182 71 10 chrX 94112603 94113609 -72536687 - Lx4A LINE L1 -4 7054 5988 1 1303 240 400 68 33 chrX 94113801 94114137 -72536159 + L2 LINE L2 2407 2754 -665 1 1303 10807 190 31 132 chrX 94114416 94115068 -72535228 - L1_Mur3 LINE L1 -1036 4844 4197 1 1303 570 15 0 0 chrX 94115068 94115135 -72535161 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 1303 10807 190 31 132 chrX 94115135 94115422 -72534874 - L1_Mur3 LINE L1 -1684 4196 3909 1 1303 3177 25 2 48 chrX 94115422 94115607 -72534689 + MTA_Mm LTR MaLR 1 170 -226 1 1303 7382 5 0 0 chrX 94115607 94116420 -72533876 - L1Md_T LINE L1 -1 6581 5769 1 1303 3177 25 2 48 chrX 94116420 94116649 -72533647 + MTA_Mm LTR MaLR 171 396 0 1 1303 9389 24 6 0 chrX 94116649 94117741 -72532555 + MTA_Mm-int LTR MaLR 1 1098 0 1 1303 3468 20 5 0 chrX 94117741 94118135 -72532161 + MTA_Mm LTR MaLR 1 396 0 1 1303 10807 190 31 132 chrX 94118135 94120600 -72529696 - L1_Mur3 LINE L1 -1972 3908 1411 1 1303 30697 93 28 3 chrX 94120578 94126614 -72523682 - L1Md_F2 LINE L1 -12 6570 380 1 1303 2689 170 99 59 chrX 94126620 94127566 -72522730 + RLTR13D1 LTR ERVK 1 893 0 1 1303 709 126 0 0 chrX 94127577 94127696 -72522600 - L1Md_F LINE L1 -6044 475 357 1 1303 1130 160 9 9 chrX 94127685 94127900 -72522396 - L1Md_F LINE L1 -6010 509 295 1 1303 3316 209 137 8 chrX 94127909 94128911 -72521385 - L1_Mur3 LINE L1 -4451 1429 298 1 1303 205 263 18 0 chrX 94129161 94129218 -72521078 + GA-rich Low_complexity Low_complexity 3 60 0 1 1303 270 0 0 0 chrX 94129227 94129257 -72521039 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1 1303 334 220 59 35 chrX 94129350 94129435 -72520861 - ID_B1 SINE B4 -123 101 15 1 1303 290 246 130 0 chrX 94129665 94129734 -72520562 + B4A SINE B4 2 79 -213 1 1303 230 0 33 0 chrX 94130818 94130848 -72519448 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1303 2376 206 41 36 chrX 94131204 94131819 -72518477 - Lx2B LINE L1 -6 6970 6353 1 1303 2857 117 4 2 chrX 94131819 94132290 -72518006 - L1_Mus3 LINE L1 -430 5453 4982 1 1303 7334 89 4 2 chrX 94132290 94133508 -72516788 + L1_Mus3 LINE L1 5412 6632 -6 1 1303 928 217 68 17 chrX 94133512 94133746 -72516550 - Lx4B LINE L1 -716 6342 6097 1 1303 518 210 27 74 chrX 94133746 94133895 -72516401 + ORR1A2 LTR MaLR 1 142 -185 1 1303 1982 141 7 7 chrX 94133785 94134092 -72516204 - MT2B LTR ERVL -294 307 1 1 1303 2604 164 30 2 chrX 94134097 94134675 -72515621 - Lx2B LINE L1 -904 6096 5502 1 1303 2549 156 40 0 chrX 94134675 94135079 -72515217 + MTC LTR MaLR 2 421 0 1 1303 2413 107 8 73 chrX 94135320 94135704 -72514592 + RLTR10D LTR ERVK 1 359 0 1 1303 22235 81 8 2 chrX 94135704 94138744 -72511552 + IAP-d-int LTR ERVK 1 3059 -3483 1 1303 12021 60 4 4 chrX 94138744 94140333 -72509963 + IAP-d-int LTR ERVK 3807 5394 -1148 1 1303 4757 50 16 0 chrX 94140373 94140991 -72509305 + IAP-d-int LTR ERVK 5394 6021 -521 1 1303 3074 84 0 0 chrX 94140994 94141409 -72508887 + IAP-d-int LTR ERVK 6128 6542 0 1 1303 2431 106 3 72 chrX 94141409 94141795 -72508501 + RLTR10D LTR ERVK 1 359 0 1 1303 333 201 0 143 chrX 94141795 94142004 -72508292 - RMER17C LTR ERVK -146 264 86 1 1303 648 124 0 0 chrX 94142037 94142142 -72508154 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 1 1303 407 235 12 12 chrX 94142272 94142358 -72507938 - B3A SINE B2 -75 123 38 1 1303 370 293 0 10 chrX 94142508 94142608 -72507688 + RMER21B LTR ERV1 95 193 -649 1 1303 1969 136 48 0 chrX 94142725 94143034 -72507262 - ORR1A2 LTR MaLR -3 324 1 1 1303 2149 153 40 38 chrX 94143034 94143117 -72507179 - L1_Mur2 LINE L1 -3297 2580 2499 1 1303 1148 111 32 43 chrX 94143117 94143305 -72506991 - B2_Mm2 SINE B2 -9 186 1 1 1303 2149 153 40 38 chrX 94143305 94143643 -72506653 - L1_Mur2 LINE L1 -3379 2498 2158 1 1303 413 336 8 17 chrX 94143717 94143835 -72506461 - PB1D10 SINE Alu 0 117 1 1 1303 2002 218 47 25 chrX 94144669 94145074 -72505222 + MTD LTR MaLR 1 414 -5 1 1303 1600 222 105 8 chrX 94145210 94145495 -72504801 + MTD LTR MaLR 1 296 -123 1 1303 1517 204 46 27 chrX 94145495 94145665 -72504631 + ORR1D1 LTR MaLR 1 180 -194 1 1303 189 0 0 0 chrX 94145665 94145686 -72504610 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 1303 1517 204 46 27 chrX 94145686 94145882 -72504414 + ORR1D1 LTR MaLR 181 374 0 1 1303 1600 222 105 8 chrX 94145882 94145978 -72504318 + MTD LTR MaLR 297 419 0 1 1303 381 297 29 10 chrX 94146269 94146371 -72503925 - PB1D10 SINE Alu -6 111 8 1 1303 222 345 0 0 chrX 94146320 94146378 -72503918 - B4A SINE B4 -149 143 86 1 1303 285 240 0 74 chrX 94146431 94146512 -72503784 - ID4_ SINE ID -3 80 6 1 1303 572 267 17 0 chrX 94146772 94146892 -72503404 - ID_B1 SINE B4 -7 217 96 1 1303 330 224 193 20 chrX 94146899 94147049 -72503247 - L1MC5 LINE L1 -31 7930 7755 1 1303 21 0 0 0 chrX 94147066 94147087 -72503209 + AT_rich Low_complexity Low_complexity 1 21 0 1 1303 488 133 264 57 chrX 94147152 94147311 -72502985 - Lx9 LINE L1 -34 7610 7419 1 1303 874 158 41 78 chrX 94147307 94147526 -72502770 + Lx9 LINE L1 7191 7401 -243 1 1303 331 199 106 71 chrX 94147521 94147662 -72502634 - L1MB3 LINE L1 -38 6145 6000 1 1303 491 221 142 49 chrX 94147767 94147972 -72502324 - L1MC5 LINE L1 -1084 6877 6654 1 1303 291 329 0 50 chrX 94147987 94148067 -72502229 + ID2 SINE ID 2 77 -6 1 1303 341 330 184 0 chrX 94148163 94148369 -72501927 + Kanga2_a DNA Tc2 5 248 -640 1 1303 261 318 83 18 chrX 94148413 94148522 -72501774 - PB1D10 SINE Alu 0 117 2 1 1303 340 320 10 10 chrX 94148661 94148762 -72501534 - ID_B1 SINE B4 -15 209 109 1 1303 375 308 146 5 chrX 94148764 94148976 -72501320 + Kanga2_a DNA Tc2 242 483 -405 1 1303 311 336 116 6 chrX 94149038 94149367 -72500929 - Charlie2b DNA MER1_type -3 2779 2415 1 1303 305 287 39 39 chrX 94149758 94149885 -72500411 + Lx8 LINE L1 7157 7283 -190 1 1303 29 47 0 0 chrX 94150132 94150175 -72500121 + AT_rich Low_complexity Low_complexity 1 43 0 1 1303 1073 195 54 0 chrX 94150190 94150395 -72499901 + B3 SINE B2 1 216 0 1 1303 30625 86 2 17 chrX 94150480 94155700 -72494596 + L1Md_F2 LINE L1 446 5586 -297 1 1303 7541 72 2 7 chrX 94155701 94156701 -72493595 + L1Md_F2 LINE L1 5588 6582 0 1 1303 34 42 0 0 chrX 94156773 94156821 -72493475 + AT_rich Low_complexity Low_complexity 1 48 0 1 1303 568 272 58 48 chrX 94156927 94157116 -72493180 + B3A SINE B2 3 193 -5 1 1303 257 358 35 12 chrX 94157145 94157262 -72493034 + B1F2 SINE Alu 1 116 -1 1 1303 279 351 16 83 chrX 94157367 94157488 -72492808 + PB1 SINE Alu 6 118 -9 1 1303 2711 174 6 65 chrX 94157587 94157685 -72492611 - L1_Mur2 LINE L1 -520 5357 5296 1 1303 1168 82 0 0 chrX 94157685 94157832 -72492464 - B1_Mus2 SINE Alu 0 147 1 1 1303 2711 174 6 65 chrX 94157832 94158367 -72491929 - L1_Mur2 LINE L1 -582 5295 4761 1 1303 181 57 0 54 chrX 94158367 94158404 -72491892 + (CAAAA)n Simple_repeat Simple_repeat 4 38 0 1 1303 665 171 138 8 chrX 94158730 94158860 -72491436 - MTC LTR MaLR -21 400 254 1 1303 1415 243 18 83 chrX 94158855 94159241 -72491055 + MTD LTR MaLR 51 411 -8 1 1303 470 270 18 0 chrX 94159460 94159571 -72490725 + PB1D10 SINE Alu 5 117 0 1 1303 211 160 80 0 chrX 94160378 94160428 -72489868 - B1F SINE Alu -6 143 90 1 1303 469 233 78 57 chrX 94160393 94160534 -72489762 - ID_B1 SINE B4 -49 175 32 1 1303 263 242 227 0 chrX 94160483 94160549 -72489747 - ID4_ SINE ID -2 81 1 1 1303 319 274 212 16 chrX 94160778 94160937 -72489359 + B4A SINE B4 2 186 -106 1 1303 214 296 0 27 chrX 94161169 94161242 -72489054 + CT-rich Low_complexity Low_complexity 3 73 0 1 1303 282 73 0 0 chrX 94161540 94161581 -72488715 + (T)n Simple_repeat Simple_repeat 1 41 0 1 1303 2348 241 48 44 chrX 94162620 94163740 -72486556 - Lx LINE L1 -25 6629 5496 1 1303 2509 152 13 4 chrX 94163737 94164205 -72486091 + L1_Mur2 LINE L1 5018 5489 -388 1 1303 2193 174 43 39 chrX 94164469 94164959 -72485337 + Lx4B LINE L1 6550 7041 -17 1 1303 522 46 0 0 chrX 94164962 94165027 -72485269 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 1303 313 332 116 52 chrX 94165111 94165343 -72484953 + L1MC LINE L1 5574 5820 -2062 2 1303 23 0 0 0 chrX 94165388 94165411 -72484885 + AT_rich Low_complexity Low_complexity 1 23 0 2 1303 6335 244 77 18 chrX 94165563 94167310 -72482986 - Lx5 LINE L1 -26 7434 5341 2 1303 2916 87 10 0 chrX 94167310 94167726 -72482570 - L1_Mus3 LINE L1 -8 6630 6211 2 1303 6335 188 93 16 chrX 94167726 94168360 -72481936 - Lx5 LINE L1 -537 5340 4624 2 1303 759 52 0 0 chrX 94168360 94168456 -72481840 + (TTTC)n Simple_repeat Simple_repeat 1 96 0 2 1303 6335 188 93 16 chrX 94168456 94168772 -72481524 - Lx5 LINE L1 -1254 4623 4304 2 1303 1435 281 152 32 chrX 94168918 94169690 -72480606 - Charlie1a DNA MER1_type -283 1172 309 2 1303 29 28 0 0 chrX 94169699 94169735 -72480561 + AT_rich Low_complexity Low_complexity 1 36 0 2 1303 381 341 36 16 chrX 94169829 94170076 -72480220 - Lx9 LINE L1 -134 7510 7259 2 1303 279 0 0 0 chrX 94170149 94170180 -72480116 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1303 23 0 0 0 chrX 94170298 94170321 -72479975 + AT_rich Low_complexity Low_complexity 1 23 0 2 1303 339 289 67 39 chrX 94170508 94170688 -72479608 - Kanga1 DNA Tc2 -150 1595 1411 2 1303 2253 208 0 54 chrX 94170774 94171293 -72479003 + Lx2B LINE L1 6486 6976 -24 2 1303 1167 251 101 38 chrX 94171293 94171661 -72478635 - MTD LTR MaLR -28 391 1 2 1303 235 386 35 24 chrX 94171683 94171853 -72478443 - Kanga1 DNA Tc2 -379 1366 1195 2 1303 722 317 46 46 chrX 94172305 94172586 -72477710 + MTE2a LTR MaLR 92 372 -7 2 1303 457 161 31 35 chrX 94172801 94172918 -72477378 - ORR1A4 LTR MaLR 0 384 258 2 1303 323 73 0 0 chrX 94172918 94172959 -72477337 - L1_Mm LINE L1 -1462 4421 4381 2 1303 1912 48 0 0 chrX 94172959 94173189 -72477107 + L1Md_F2 LINE L1 5357 5586 -297 2 1303 8106 39 9 0 chrX 94173190 94174161 -72476135 + L1Md_F2 LINE L1 5588 6567 -15 2 1303 1609 120 14 70 chrX 94174172 94174459 -72475837 - ORR1A4 LTR MaLR -58 271 1 2 1303 333 275 38 38 chrX 94174539 94174623 -72475673 + MTE2b LTR MaLR 22 106 -273 2 1303 369 0 0 0 chrX 94174623 94174664 -72475632 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1303 333 295 19 19 chrX 94174664 94174745 -72475551 + MTE2b LTR MaLR 107 263 -116 2 1303 1085 291 30 16 chrX 94174793 94175157 -72475139 + MTE2b-int LTR MaLR 1203 1571 -9 2 1303 779 292 28 28 chrX 94175166 94175384 -72474912 + MTE2b LTR MaLR 1 218 -161 2 1303 272 180 20 0 chrX 94175666 94175716 -72474580 + MTEa LTR MaLR 4 54 -325 2 1303 22 0 0 0 chrX 94176035 94176057 -72474239 + AT_rich Low_complexity Low_complexity 1 22 0 2 1303 243 323 111 0 chrX 94176057 94176156 -72474140 - RSINE1 SINE B4 -2 163 54 2 1303 2804 58 0 3 chrX 94176632 94176992 -72473304 + L1_Mus1 LINE L1 6208 6566 -1 2 1303 522 262 88 21 chrX 94177004 94177242 -72473054 + Lx9 LINE L1 5588 5841 -6 2 1303 447 271 99 7 chrX 94177247 94177388 -72472908 + Lx9 LINE L1 6353 6506 -1138 2 1303 1487 294 59 20 chrX 94177383 94177403 -72472893 - Lx9 LINE L1 -608 7036 7020 2 1303 387 56 0 0 chrX 94177403 94177457 -72472839 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1303 1487 294 59 20 chrX 94177457 94177925 -72472371 - Lx9 LINE L1 -625 7019 6529 2 1303 198 0 0 0 chrX 94177959 94177981 -72472315 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 1303 714 330 29 62 chrX 94178002 94178484 -72471812 + Lx9 LINE L1 7052 7517 -127 2 1303 200 295 129 59 chrX 94179771 94179872 -72470424 + MIR3 SINE MIR 63 170 -38 2 1303 489 71 0 0 chrX 94180113 94180183 -72470113 + (CA)n Simple_repeat Simple_repeat 1 70 0 2 1303 7275 189 21 20 chrX 94180394 94181926 -72468370 + Lx5 LINE L1 5511 7049 -1 2 1303 423 0 0 0 chrX 94182402 94182449 -72467847 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1303 23 33 0 0 chrX 94183668 94183698 -72466598 + AT_rich Low_complexity Low_complexity 1 30 0 2 1303 198 136 0 0 chrX 94185310 94185354 -72464942 + (T)n Simple_repeat Simple_repeat 1 44 0 2 1303 315 0 0 0 chrX 94185650 94185685 -72464611 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 1303 27 0 0 0 chrX 94185772 94185799 -72464497 + AT_rich Low_complexity Low_complexity 1 27 0 2 1303 755 289 156 25 chrX 94186088 94186679 -72463617 - L1MC2 LINE L1 -30 6303 5635 2 1303 1997 58 0 0 chrX 94186716 94186959 -72463337 + L1_Mm LINE L1 5339 5581 -302 2 1303 2746 67 0 0 chrX 94187176 94187522 -72462774 - ORR1A1 LTR MaLR 0 346 1 2 1303 708 165 7 70 chrX 94187981 94188124 -72462172 + B1_Mus2 SINE Alu 10 143 -4 2 1303 201 74 0 0 chrX 94188128 94188155 -72462141 + (CCAA)n Simple_repeat Simple_repeat 2 28 0 2 1303 495 242 0 57 chrX 94188198 94188338 -72461958 + Lx9 LINE L1 6821 6952 -692 2 1303 521 290 8 0 chrX 94188345 94188476 -72461820 - Lx9 LINE L1 -925 6719 6588 2 1303 781 240 20 30 chrX 94188618 94188816 -72461480 - B3A SINE B2 0 198 3 2 1303 12093 90 23 93 chrX 94188912 94189309 -72460987 - L1VL2 LINE L1 -632 2983 2572 2 1303 747 0 0 0 chrX 94189309 94189392 -72460904 + (TTTC)n Simple_repeat Simple_repeat 1 83 0 2 1303 12093 93 33 74 chrX 94189392 94191710 -72458586 - L1VL2 LINE L1 -1044 2571 397 2 1303 203 125 0 24 chrX 94191824 94191865 -72458431 + (CAAAA)n Simple_repeat Simple_repeat 3 42 0 2 1303 261 0 0 0 chrX 94191866 94191895 -72458401 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1303 1805 268 74 12 chrX 94191895 94191991 -72458305 - Lx7 LINE L1 -388 7308 7205 2 1303 1130 88 0 0 chrX 94191991 94192138 -72458158 - B1_Mus1 SINE Alu 0 148 2 2 1303 1805 268 74 12 chrX 94192138 94192623 -72457673 - Lx7 LINE L1 -492 7204 6691 2 1303 2851 44 5 64 chrX 94192623 94193011 -72457285 - RLTR10B2 LTR ERVK 0 365 1 2 1303 275 333 125 0 chrX 94193019 94193163 -72457133 - Lx9 LINE L1 -950 6694 6533 2 1303 348 278 114 9 chrX 94193165 94193376 -72456920 + Lx9 LINE L1 7389 7621 -23 2 1303 201 184 40 20 chrX 94194240 94194290 -72456006 + CT-rich Low_complexity Low_complexity 2 52 0 2 1303 570 124 0 0 chrX 94194644 94194733 -72455563 + (TA)n Simple_repeat Simple_repeat 1 89 0 2 1303 333 0 0 0 chrX 94195053 94195090 -72455206 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1303 230 0 33 0 chrX 94196661 94196691 -72453605 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1303 411 21 0 0 chrX 94196691 94196739 -72453557 + (CCA)n Simple_repeat Simple_repeat 3 50 0 2 1303 193 364 52 0 chrX 94197167 94197244 -72453052 + L2 LINE L2 2894 2974 -445 2 1303 1526 254 50 21 chrX 94197262 94197644 -72452652 + MTD LTR MaLR 27 419 0 2 1303 3308 251 85 21 chrX 94197658 94198599 -72451697 + MTD-int LTR MaLR 20 1020 -238 2 1303 951 221 58 55 chrX 94198605 94198773 -72451523 - Lx9 LINE L1 -2 7642 7474 2 1303 674 38 38 0 chrX 94198773 94198879 -72451417 + (TCTA)n Simple_repeat Simple_repeat 4 113 0 2 1303 951 221 58 55 chrX 94198879 94199036 -72451260 - Lx9 LINE L1 -171 7473 7316 2 1303 1745 243 136 80 chrX 94199016 94199543 -72450753 - Lx9 LINE L1 -1221 6423 5769 2 1303 1107 76 14 7 chrX 94199543 94199689 -72450607 - B1_Mm SINE Alu 0 147 1 2 1303 1745 230 130 110 chrX 94199689 94200387 -72449909 - Lx9 LINE L1 -79 5768 5015 2 1303 3498 236 103 127 chrX 94200380 94200750 -72449546 - L1_Rod LINE L1 -95 5752 5418 2 1303 1659 57 0 0 chrX 94200750 94200959 -72449337 - L1_Mus2 LINE L1 -1 6565 6357 2 1303 3498 236 103 127 chrX 94200959 94201048 -72449248 - L1_Rod LINE L1 -430 5417 5328 2 1303 5546 54 0 0 chrX 94201048 94201738 -72448558 - L1Md_F2 LINE L1 0 6582 5893 2 1303 3498 236 103 127 chrX 94201738 94201854 -72448442 - L1_Rod LINE L1 -520 5327 5168 2 1303 555 29 0 0 chrX 94201854 94201923 -72448373 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 2 1303 835 72 0 0 chrX 94201924 94202035 -72448261 - B1_Mm SINE Alu -10 137 27 2 1303 5398 112 5 12 chrX 94202035 94202864 -72447432 + L1_Mus4 LINE L1 5802 6624 -12 2 1303 3498 236 103 127 chrX 94202864 94204283 -72446013 - L1_Rod LINE L1 -680 5167 3694 2 1303 1671 266 34 21 chrX 94204392 94204869 -72445427 - MT2A LTR ERVL -50 483 1 2 1303 1875 277 78 36 chrX 94204869 94205514 -72444782 - Lx8 LINE L1 -578 6895 6224 2 1303 546 16 0 0 chrX 94206611 94206674 -72443622 + (TC)n Simple_repeat Simple_repeat 2 64 0 2 1303 256 301 96 0 chrX 94206903 94206976 -72443320 + ID4_ SINE ID 2 81 -2 2 1303 584 147 0 17 chrX 94207121 94207239 -72443057 + (TCTA)n Simple_repeat Simple_repeat 3 118 0 2 1303 426 357 18 6 chrX 94208247 94208416 -72441880 + L2 LINE L2 2675 2845 -574 2 1303 349 372 95 0 chrX 94209123 94209260 -72441036 - MER2B DNA MER2_type -5 331 182 2 1303 180 0 0 0 chrX 94209260 94209280 -72441016 + (TAAAA)n Simple_repeat Simple_repeat 5 24 0 2 1303 2518 204 35 105 chrX 94211547 94212762 -72437534 + L1_Mus1 LINE L1 217 1209 -5448 2 1303 243 0 0 0 chrX 94212762 94212789 -72437507 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1303 30162 122 4 7 chrX 94212789 94214985 -72435311 + L1_Mus1 LINE L1 1203 3369 -2514 2 1303 2106 116 3 6 chrX 94214985 94215297 -72434999 + RLTR10E LTR ERVK 1 311 0 2 1303 30162 114 3 4 chrX 94215297 94217871 -72432425 + L1_Mus1 LINE L1 3370 5934 -650 2 1303 1051 43 0 7 chrX 94217876 94218017 -72432279 - L1Md_F3 LINE L1 -14 6570 6431 2 1303 4692 90 3 2 chrX 94218007 94218644 -72431652 + L1_Mus1 LINE L1 5929 6566 -1 2 1303 22 35 0 0 chrX 94218772 94218801 -72431495 + AT_rich Low_complexity Low_complexity 1 29 0 2 1303 630 288 71 0 chrX 94218896 94219066 -72431230 + B3A SINE B2 1 182 -16 2 1303 211 334 52 24 chrX 94219262 94219388 -72430908 - MIR3 SINE MIR -3 205 77 2 1303 215 385 18 35 chrX 94219632 94219745 -72430551 - MIRc SINE MIR -135 133 23 2 1303 486 0 0 0 chrX 94220124 94220178 -72430118 + (TC)n Simple_repeat Simple_repeat 1 54 0 2 1303 426 39 0 0 chrX 94220178 94220229 -72430067 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 1303 286 273 38 25 chrX 94220495 94220574 -72429722 + ID4_ SINE ID 2 81 -2 2 1303 180 0 0 0 chrX 94221639 94221659 -72428637 + (GA)n Simple_repeat Simple_repeat 1 20 0 2 1303 226 258 116 21 chrX 94222144 94222239 -72428057 - MIR SINE MIR -33 229 126 2 1303 354 325 17 17 chrX 94222415 94222531 -72427765 - MIR SINE MIR -107 155 40 2 1303 786 76 0 0 chrX 94222861 94222980 -72427316 + (GA)n Simple_repeat Simple_repeat 2 120 0 2 1303 187 362 54 41 chrX 94223040 94223187 -72427109 + L2 LINE L2 2700 2848 -571 2 1303 35 41 0 0 chrX 94224394 94224443 -72425853 + AT_rich Low_complexity Low_complexity 1 49 0 2 1303 662 269 263 15 chrX 94224962 94225491 -72424805 - L1MB7 LINE L1 -49 6135 5476 2 1303 3303 217 90 7 chrX 94225510 94226332 -72423964 - Lx7 LINE L1 -8 6973 6084 2 1303 3692 159 8 23 chrX 94226332 94226977 -72423319 + Lx2 LINE L1 6363 6997 0 2 1303 5640 234 42 29 chrX 94226977 94228406 -72421890 - Lx7 LINE L1 -438 7258 5810 2 1303 251 338 25 0 chrX 94228479 94228559 -72421737 + ID4 SINE ID 1 82 -1 2 1303 1373 306 43 23 chrX 94228564 94229002 -72421294 + MLT2B2 LTR ERVL 61 507 -8 2 1303 181 382 39 10 chrX 94229355 94229458 -72420838 - L2 LINE L2 -774 2645 2540 2 1303 21 0 0 0 chrX 94229690 94229711 -72420585 + AT_rich Low_complexity Low_complexity 1 21 0 2 1303 240 337 70 40 chrX 94230390 94230591 -72419705 + MamRep434 DNA TcMar 5 211 -215 2 1303 261 83 0 0 chrX 94232483 94232519 -72417777 + (TC)n Simple_repeat Simple_repeat 1 36 0 3 1303 186 43 0 0 chrX 94232575 94232598 -72417698 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1303 538 285 43 40 chrX 94232637 94233004 -72417292 - L1MA4 LINE L1 -370 5930 5556 3 1303 433 339 56 17 chrX 94233089 94233446 -72416850 - L1MA4 LINE L1 -863 5280 4910 3 1303 35303 80 7 5 chrX 94233455 94239812 -72410484 - L1Md_F3 LINE L1 0 6584 238 3 1303 1766 292 131 28 chrX 94239821 94240380 -72409916 - L1_Mur3 LINE L1 -992 4888 4318 3 1303 222 37 0 0 chrX 94240380 94240407 -72409889 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 162 1766 292 131 28 chrX 94240407 94241272 -72409024 - L1_Mur3 LINE L1 -1563 4317 3319 3 1304 1751 150 102 3 chrX 94241308 94241642 -72408654 + ORR1B2 LTR MaLR 1 367 0 3 1304 626 290 26 88 chrX 94241674 94241867 -72408429 - B3 SINE B2 -31 185 5 3 1304 304 336 73 34 chrX 94241944 94242301 -72407995 - L1MD LINE L1 -2866 3280 2910 3 1304 488 279 115 95 chrX 94242345 94242884 -72407412 - L1_Rod LINE L1 -3665 2182 1633 3 1304 221 119 24 0 chrX 94243691 94243733 -72406563 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 3 1304 798 269 42 84 chrX 94244145 94244466 -72405830 + MT2B LTR ERVL 236 546 -55 3 1304 318 26 0 0 chrX 94244466 94244505 -72405791 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 3 1304 798 269 42 84 chrX 94244505 94244516 -72405780 + MT2B LTR ERVL 547 554 -47 3 1304 38300 8 1 0 chrX 94245045 94250623 -72399673 + L1Md_A LINE L1 7 5586 -297 3 1304 8966 3 1 0 chrX 94250623 94251618 -72398678 + L1Md_A LINE L1 5587 6582 0 3 1304 38300 7 1 0 chrX 94251618 94251629 -72398667 + L1Md_A LINE L1 5587 5597 -286 3 1304 200 125 0 24 chrX 94251784 94251825 -72398471 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 3 1304 438 20 0 0 chrX 94251928 94251979 -72398317 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1304 549 0 0 0 chrX 94251979 94252039 -72398257 + (GA)n Simple_repeat Simple_repeat 1 61 0 3 1304 4834 115 38 22 chrX 94252171 94252953 -72397343 + Lx LINE L1 5858 6652 -2 3 1304 279 0 0 0 chrX 94253261 94253292 -72397004 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1304 22 0 0 0 chrX 94254752 94254774 -72395522 + AT_rich Low_complexity Low_complexity 1 22 0 3 1304 2858 116 56 39 chrX 94255240 94255707 -72394589 + MT2C_Mm LTR ERVL 1 475 0 3 1304 21 36 0 0 chrX 94255949 94255977 -72394319 + AT_rich Low_complexity Low_complexity 1 28 0 3 1304 1114 95 0 0 chrX 94256760 94256907 -72393389 + B1_Mus1 SINE Alu 2 148 0 3 1304 289 323 102 21 chrX 94256929 94257104 -72393192 + ORR1E LTR MaLR 64 248 -131 3 1304 321 257 27 0 chrX 94257177 94257251 -72393045 + ORR1E LTR MaLR 272 347 -12 3 1304 250 333 219 7 chrX 94257317 94257468 -72392828 + L1MB8 LINE L1 104 286 -7048 3 1304 1856 306 136 25 chrX 94257666 94258835 -72391461 + L1MB8 LINE L1 504 1802 -5532 3 1304 1152 146 54 0 chrX 94258985 94259170 -72391126 - L1VL4 LINE L1 -6063 239 45 3 1304 5054 158 5 1 chrX 94259162 94260059 -72390237 + L1Md_F2 LINE L1 5008 5905 -677 3 1304 2816 151 93 4 chrX 94260059 94260566 -72389730 + Lx LINE L1 6096 6647 -7 3 1304 2102 145 9 0 chrX 94260566 94260593 -72389703 + L1Md_F2 LINE L1 5906 5935 -647 3 1304 573 164 7 7 chrX 94260794 94260929 -72389367 + Lx3_Mus LINE L1 6875 7009 0 3 1304 1248 290 105 38 chrX 94260930 94261946 -72388350 + L1MB8 LINE L1 5251 6333 -705 3 1304 309 275 37 42 chrX 94262066 94262256 -72388040 + L1MA4 LINE L1 5254 5442 -858 3 1304 234 219 91 12 chrX 94262275 94262357 -72387939 + PB1 SINE Alu 21 124 -3 3 1304 720 284 71 31 chrX 94262369 94262693 -72387603 + L1MA4 LINE L1 5445 5781 -510 3 1304 462 250 142 0 chrX 94262694 94262814 -72387482 + B3A SINE B2 2 138 -60 3 1304 849 37 0 0 chrX 94262832 94262941 -72387355 + (CA)n Simple_repeat Simple_repeat 2 110 0 3 1304 460 229 61 0 chrX 94262952 94263083 -72387213 + L1MA4 LINE L1 5769 5907 -393 3 1304 1093 319 27 45 chrX 94263093 94263467 -72386829 - MTE2a LTR MaLR -12 367 1 3 1304 621 272 61 15 chrX 94263697 94263895 -72386401 + B3 SINE B2 3 209 -7 3 1304 269 318 57 33 chrX 94263908 94264212 -72386084 + L1MB8 LINE L1 6720 7038 0 3 1304 190 277 46 0 chrX 94264409 94264474 -72385822 - L4 LINE RTE -1588 441 374 3 1304 216 0 0 0 chrX 94264923 94264947 -72385349 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1304 441 0 0 0 chrX 94266889 94266938 -72383358 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1304 414 0 0 0 chrX 94266938 94266983 -72383313 + (GA)n Simple_repeat Simple_repeat 2 47 0 3 1304 209 125 25 0 chrX 94267390 94267430 -72382866 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 3 1304 208 135 0 0 chrX 94267556 94267593 -72382703 + (T)n Simple_repeat Simple_repeat 1 37 0 3 1304 540 0 0 0 chrX 94268118 94268178 -72382118 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 1304 222 128 0 0 chrX 94268610 94268649 -72381647 + (TTG)n Simple_repeat Simple_repeat 3 41 0 3 1304 210 128 0 0 chrX 94268647 94268686 -72381610 + (TGG)n Simple_repeat Simple_repeat 3 41 0 3 1304 369 266 123 9 chrX 94269503 94269617 -72380679 - B1F1 SINE Alu -7 142 16 3 1304 326 308 23 14 chrX 94270438 94270622 -72379674 - L1MA5 LINE L1 0 6300 6104 3 1304 192 218 17 68 chrX 94272824 94272883 -72377413 - MIR3 SINE MIR -41 167 112 3 1304 307 209 9 9 chrX 94275393 94275499 -72374797 + CT-rich Low_complexity Low_complexity 6 111 0 3 1304 532 294 38 33 chrX 94276134 94276317 -72373979 + MIRb SINE MIR 17 200 -68 3 1304 213 306 18 9 chrX 94276321 94276430 -72373866 + (TTA)n Simple_repeat Simple_repeat 1 110 0 3 1304 6231 68 75 5 chrX 94278294 94279153 -72371143 - L1_Mus4 LINE L1 -5 6631 5713 3 1304 4612 164 12 12 chrX 94279152 94279827 -72370469 + L1_Mm LINE L1 4942 5612 -271 3 1304 432 0 0 0 chrX 94279827 94279875 -72370421 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1304 4612 164 12 12 chrX 94279875 94280022 -72370274 + L1_Mm LINE L1 5613 5763 -120 3 1304 267 360 50 55 chrX 94280064 94280246 -72370050 - RMER15 LTR ERVL -56 519 339 3 1304 1416 284 88 31 chrX 94280482 94280972 -72369324 - RMER15-int LTR ERVL -321 4678 4161 3 1304 1655 225 71 13 chrX 94281055 94281451 -72368845 - MTD LTR MaLR 0 419 1 3 1304 3251 326 63 42 chrX 94281522 94283088 -72367208 - RMER15-int LTR ERVL -2775 2224 626 3 1304 23 86 0 0 chrX 94283879 94283937 -72366359 + AT_rich Low_complexity Low_complexity 1 58 0 3 1304 1392 254 26 62 chrX 94284032 94284422 -72365874 + MTEb LTR MaLR 4 379 0 3 1304 27 49 0 0 chrX 94284677 94284718 -72365578 + AT_rich Low_complexity Low_complexity 1 41 0 3 1304 32981 95 26 9 chrX 94284836 94291110 -72359186 - L1Md_F2 LINE L1 -2 6580 171 3 1304 414 0 0 0 chrX 94292240 94292286 -72358010 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1304 24 53 0 0 chrX 94292475 94292513 -72357783 + AT_rich Low_complexity Low_complexity 1 38 0 3 1304 356 307 78 63 chrX 94292661 94292852 -72357444 + MTEa LTR MaLR 6 199 -180 3 1304 292 327 30 0 chrX 94293105 94293206 -72357090 - RMER15 LTR ERVL -65 510 407 3 1304 414 0 0 0 chrX 94293284 94293330 -72356966 + (ATTG)n Simple_repeat Simple_repeat 2 47 0 3 1304 299 305 236 36 chrX 94293566 94293836 -72356460 - L1MB7 LINE L1 -140 6044 5721 3 1304 5753 114 3 6 chrX 94294134 94294993 -72355303 + Lx2 LINE L1 6139 6995 -2 3 1304 9286 97 25 17 chrX 94295315 94297413 -72352883 - Lx3_Mus LINE L1 0 7009 4892 3 1304 329 184 0 75 chrX 94297694 94297800 -72352496 + Lx9 LINE L1 7544 7641 -3 3 1304 757 280 27 5 chrX 94297799 94297986 -72352310 + Lx8 LINE L1 7139 7329 -144 3 1304 3640 137 17 13 chrX 94298015 94298616 -72351680 + Lx4A LINE L1 6454 7056 -2 3 1304 1100 88 0 0 chrX 94298624 94298771 -72351525 + B1_Mus1 SINE Alu 2 148 0 3 1304 188 146 49 0 chrX 94298880 94298921 -72351375 + (CATA)n Simple_repeat Simple_repeat 1 43 0 3 1304 1587 305 85 26 chrX 94299154 94300171 -72350125 - L1_Rod LINE L1 -26 5821 4745 3 1304 3012 171 70 15 chrX 94300188 94300842 -72349454 + RMER6C LTR ERVK 1 690 0 3 1304 2644 337 52 7 chrX 94300939 94302066 -72348230 - Lx8 LINE L1 -37 7436 6260 3 1304 325 331 63 21 chrX 94302146 94302743 -72347553 - L1_Rod LINE L1 -3680 2167 1535 3 1304 1011 100 0 7 chrX 94302748 94302889 -72347407 + B1_Mus1 SINE Alu 2 141 -7 3 1304 300 271 97 57 chrX 94303103 94303279 -72347017 - L1M4b LINE L1 -5643 1691 1509 3 1304 3148 181 39 2 chrX 94303323 94303944 -72346352 + L1_Mm LINE L1 4693 5336 -547 3 1304 7301 130 19 10 chrX 94303944 94305141 -72345155 + Lx2 LINE L1 5790 6997 0 3 1304 1615 176 26 59 chrX 94305182 94305395 -72344901 - RMER17C LTR ERVK 0 410 197 3 1304 1092 89 0 0 chrX 94305395 94305575 -72344721 + (GA)n Simple_repeat Simple_repeat 1 180 0 3 1304 1615 176 26 59 chrX 94305575 94305785 -72344511 - RMER17C LTR ERVK -214 196 1 3 1304 4255 79 1 1 chrX 94306043 94306731 -72343565 - L1_Mus2 LINE L1 -610 5956 5269 3 1304 995 140 12 6 chrX 94306731 94306903 -72343393 + L1_Mus3 LINE L1 6459 6631 -7 3 1304 844 307 93 29 chrX 94307189 94307501 -72342795 - Lx7 LINE L1 -784 6912 6581 3 1304 1367 242 107 42 chrX 94307505 94307954 -72342342 - Lx6 LINE L1 -9 7451 6974 3 1304 430 299 86 49 chrX 94308007 94308169 -72342127 - Lx7 LINE L1 -1110 6586 6419 3 1304 833 206 62 6 chrX 94308170 94308346 -72341950 - MTD LTR MaLR -2 417 232 3 1304 1971 210 23 181 chrX 94308352 94309077 -72341219 - RMER19C LTR ERVK 0 611 1 3 1304 4457 120 23 35 chrX 94309192 94309652 -72340644 + RMER17D2 LTR ERVK 1 449 -360 3 1304 321 26 0 0 chrX 94309652 94309690 -72340606 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1304 4457 120 23 35 chrX 94309690 94310048 -72340248 + RMER17D2 LTR ERVK 450 809 0 3 1304 288 182 0 83 chrX 94310064 94310148 -72340148 - MurERV4_19-int LTR ERVK -100 5680 5604 3 1304 541 186 31 24 chrX 94310143 94310270 -72340026 - MurERV4_19-int LTR ERVK -466 5314 5187 3 1304 6013 114 13 12 chrX 94310334 94311285 -72339011 - MurERV4_19-int LTR ERVK -561 5219 4268 3 1304 1081 285 17 31 chrX 94311304 94311717 -72338579 - Lx7 LINE L1 -1661 6035 5629 3 1304 590 333 69 6 chrX 94311715 94312007 -72338289 + Lx7 LINE L1 6903 7222 -251 3 1304 243 0 0 0 chrX 94312082 94312109 -72338187 + (TTCC)n Simple_repeat Simple_repeat 1 27 0 3 1304 860 176 0 11 chrX 94312109 94312282 -72338014 + CT-rich Low_complexity Low_complexity 6 176 0 3 1304 2807 145 11 9 chrX 94312282 94312742 -72337554 - Lx2 LINE L1 0 6997 6537 3 1304 2918 193 67 11 chrX 94312742 94313356 -72336940 - L1_Mur2 LINE L1 -653 5224 4577 3 1304 4486 137 50 14 chrX 94313356 94314960 -72335336 - L1VL4 LINE L1 -1572 2342 550 3 1304 22 0 0 0 chrX 94315023 94315045 -72335251 + AT_rich Low_complexity Low_complexity 1 22 0 3 1304 267 343 19 0 chrX 94315251 94315374 -72334922 + Lx7 LINE L1 7214 7457 -187 3 1304 319 258 65 107 chrX 94315466 94315635 -72334661 + RMER12 LTR ERVK 727 888 -434 3 1304 1140 238 87 55 chrX 94315571 94315987 -72334309 - MT2A LTR ERVL -40 561 1 3 1304 45 0 0 0 chrX 94316076 94316121 -72334175 + AT_rich Low_complexity Low_complexity 1 45 0 4 1304 250 368 51 14 chrX 94316121 94316259 -72334037 - B3 SINE B2 -3 213 71 4 1304 596 233 7 58 chrX 94316230 94316246 -72334050 + ID_B1 SINE B4 75 221 -3 4 1304 981 122 7 0 chrX 94316246 94316385 -72333911 + B1_Mus2 SINE Alu 6 145 -2 4 1304 289 0 49 0 chrX 94316385 94316426 -72333870 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1304 291 203 0 0 chrX 94316435 94316499 -72333797 + GA-rich Low_complexity Low_complexity 1 64 0 4 1304 309 322 22 0 chrX 94316499 94316589 -72333707 - B3A SINE B2 -106 92 1 4 1304 617 374 15 18 chrX 94316747 94317074 -72333222 + MLT1-int LTR MaLR 407 732 -639 4 1304 923 90 0 0 chrX 94317230 94317364 -72332932 - L1_Mus2 LINE L1 0 6566 6433 4 1304 378 42 0 0 chrX 94317893 94317941 -72332355 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1304 761 203 7 0 chrX 94318297 94318445 -72331851 + Lx9 LINE L1 7274 7422 -222 4 1304 243 0 0 0 chrX 94318445 94318472 -72331824 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1304 441 0 0 0 chrX 94318472 94318520 -72331776 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 1304 252 0 0 0 chrX 94318539 94318567 -72331729 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 1304 459 222 0 0 chrX 94318580 94318679 -72331617 + Lx9 LINE L1 7534 7632 -12 4 1304 271 227 40 0 chrX 94318687 94318762 -72331534 + (TA)n Simple_repeat Simple_repeat 1 78 0 4 1304 369 0 0 0 chrX 94319207 94319248 -72331048 + (TTTAG)n Simple_repeat Simple_repeat 3 43 0 4 1304 1007 117 0 0 chrX 94319248 94319385 -72330911 - B1_Mus2 SINE Alu -8 139 3 4 1304 2623 79 3 11 chrX 94319385 94319755 -72330541 + L1Md_F2 LINE L1 6204 6570 -12 4 1304 599 295 0 11 chrX 94319755 94319933 -72330363 + Lx7 LINE L1 6805 6980 -716 4 1304 3090 156 41 22 chrX 94319937 94321178 -72329118 + L1Md_F LINE L1 123 1393 -2424 4 1304 298 45 14 82 chrX 94321178 94321251 -72329045 + (ATAAG)n Simple_repeat Simple_repeat 5 72 0 4 1304 2062 111 45 3 chrX 94321251 94321314 -72328982 + L1Md_F LINE L1 1394 1472 -2345 4 1304 3262 69 7 2 chrX 94321314 94321752 -72328544 + L1_Mus2 LINE L1 6127 6566 0 4 1304 872 336 5 48 chrX 94321757 94322173 -72328123 + Lx7 LINE L1 6970 7367 -329 4 1304 201 182 0 0 chrX 94322173 94322206 -72328090 + T-rich Low_complexity Low_complexity 1 33 0 4 1304 230 240 13 13 chrX 94322255 94322331 -72327965 + Lx7 LINE L1 7603 7678 -18 4 1304 1592 310 68 34 chrX 94322513 94323913 -72326383 + Lx8 LINE L1 5337 6977 -667 4 1304 296 318 36 0 chrX 94323962 94324072 -72326224 + Lx8 LINE L1 7073 7186 -458 4 1304 38 22 0 0 chrX 94324181 94324226 -72326070 + AT_rich Low_complexity Low_complexity 1 45 0 4 1304 1316 83 16 6 chrX 94324250 94324432 -72325864 + B2_Mm2 SINE B2 2 185 -10 4 1304 6671 83 15 9 chrX 94324495 94325407 -72324889 - L1_Mus1 LINE L1 0 6567 5650 4 1304 542 272 26 0 chrX 94325426 94325540 -72324756 - B3 SINE B2 -57 159 43 4 1304 1030 142 3 26 chrX 94325557 94325735 -72324561 - L1_Mm LINE L1 -224 5659 5510 4 1304 664 340 0 0 chrX 94326419 94326628 -72323668 - Lx8 LINE L1 -151 7322 7114 4 1304 1071 237 27 27 chrX 94326735 94326995 -72323301 + Lx8 LINE L1 6659 6918 -555 4 1304 437 265 0 10 chrX 94327542 94327641 -72322655 - RSINE1 SINE B4 -64 101 4 4 1304 5081 196 16 18 chrX 94327675 94328769 -72321527 + Lx6 LINE L1 4430 5520 -360 4 1304 965 254 142 12 chrX 94328770 94329108 -72321188 + Lx6 LINE L1 5832 6213 -1247 4 1304 510 225 125 0 chrX 94329109 94329229 -72321067 - RLTR21 LTR ERVK 0 1572 1438 4 1304 465 90 0 0 chrX 94329245 94329312 -72320984 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 1304 333 0 0 0 chrX 94329312 94329348 -72320948 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 1304 5157 199 39 42 chrX 94329349 94330501 -72319795 - RMER12B LTR ERVK -209 1195 48 4 1304 1649 251 45 22 chrX 94330518 94330918 -72319378 + Lx6 LINE L1 6209 6617 -843 4 1304 3954 179 10 28 chrX 94330943 94331215 -72319081 + L1VL4 LINE L1 1 401 -5901 4 1304 3041 20 0 141 chrX 94331215 94331669 -72318627 - RLTR10 LTR ERVK 0 390 1 4 1304 3954 162 0 23 chrX 94331669 94332126 -72318170 + L1VL4 LINE L1 198 649 -5653 4 1304 373 114 32 4 chrX 94332123 94332195 -72318101 + MusHAL1 LINE L1 1251 1322 -4555 4 1304 1243 128 5 0 chrX 94332195 94332399 -72317897 + MusHAL1 LINE L1 2152 2356 -1558 4 1304 13263 165 32 9 chrX 94332416 94335990 -72314306 + L1_Mus4 LINE L1 2988 6632 -4 4 1304 519 172 20 0 chrX 94335993 94336092 -72314204 + Lx6 LINE L1 6597 6697 -763 4 1304 245 282 9 97 chrX 94336092 94336206 -72314090 + Lx7 LINE L1 6795 6898 -798 4 1304 217 96 0 71 chrX 94336242 94336298 -72313998 + (CAGAGA)n Simple_repeat Simple_repeat 3 54 0 4 1304 813 257 32 9 chrX 94336313 94336529 -72313767 + Lx6 LINE L1 6896 7116 -344 4 1304 2258 208 77 13 chrX 94336534 94337080 -72313216 - RMER1C Other Other 0 1342 762 4 1304 2403 144 38 38 chrX 94337080 94337555 -72312741 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1304 965 229 33 47 chrX 94337573 94337765 -72312531 + Lx6 LINE L1 7190 7376 -84 4 1304 2487 119 86 0 chrX 94337765 94338160 -72312136 + RLTR23 LTR ERV1 1 429 -1 4 1304 965 229 33 47 chrX 94338160 94338242 -72312054 + Lx6 LINE L1 7377 7460 0 4 1304 231 111 28 0 chrX 94338246 94338282 -72312014 + (AGGGGG)n Simple_repeat Simple_repeat 4 40 0 4 1304 953 156 6 0 chrX 94338282 94338443 -72311853 + GA-rich Low_complexity Low_complexity 1 161 0 4 1304 1882 90 30 0 chrX 94338443 94338711 -72311585 + L1_Mus3 LINE L1 6363 6638 0 4 1304 953 156 6 0 chrX 94338711 94338728 -72311568 + polypurine Low_complexity Low_complexity 162 179 0 4 1304 312 267 52 0 chrX 94338891 94339007 -72311289 - L1MCa LINE L1 -2779 3542 3421 4 1304 2140 131 3 0 chrX 94339161 94339474 -72310822 + ORR1A2 LTR MaLR 6 319 -8 4 1304 231 190 17 17 chrX 94340075 94340134 -72310162 + T-rich Low_complexity Low_complexity 3 61 0 4 1304 1138 211 24 50 chrX 94340232 94340572 -72309724 - Lx4B LINE L1 -5 7053 6723 4 1304 363 209 0 0 chrX 94340610 94340725 -72309571 + CT-rich Low_complexity Low_complexity 2 116 0 4 1304 479 294 309 10 chrX 94340826 94341121 -72309175 - Lx8 LINE L1 -241 7232 6850 4 1304 888 118 0 0 chrX 94341300 94341436 -72308860 + (TTTC)n Simple_repeat Simple_repeat 1 136 0 4 1304 301 348 50 5 chrX 94341667 94341866 -72308430 - L1MCa LINE L1 -5745 763 556 4 1304 308 361 126 14 chrX 94341887 94342252 -72308044 - L1MCa LINE L1 -5929 579 174 4 1304 272 182 12 49 chrX 94342610 94342691 -72307605 + Lx8 LINE L1 7391 7468 -5 4 1304 4090 44 2 8 chrX 94342964 94343471 -72306825 + LTRIS3 LTR ERV1 1 504 -8 4 1304 216 247 11 23 chrX 94343817 94343904 -72306392 + T-rich Low_complexity Low_complexity 5 90 0 4 1304 261 0 0 0 chrX 94344085 94344114 -72306182 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1304 681 228 7 0 chrX 94344114 94344250 -72306046 - B1_Mus2 SINE Alu -10 137 1 4 1304 1320 53 6 0 chrX 94344399 94344569 -72305727 - L1Md_T LINE L1 0 6582 6412 4 1304 1380 225 19 102 chrX 94344606 94345017 -72305279 + RMER10B LTR ERVL 21 397 -1 4 1304 584 222 144 34 chrX 94345582 94345790 -72304506 - RMER6C LTR ERVK -529 227 3 4 1304 24 53 0 0 chrX 94345845 94345883 -72304413 + AT_rich Low_complexity Low_complexity 1 38 0 4 1304 678 331 63 18 chrX 94345896 94346343 -72303953 + Lx8 LINE L1 6500 6956 -517 4 1304 639 271 141 6 chrX 94346346 94346673 -72303623 + MTD LTR MaLR 2 413 -6 4 1304 722 322 74 54 chrX 94346681 94346968 -72303328 + Lx8 LINE L1 6958 7238 -235 4 1304 4917 41 7 0 chrX 94346968 94347556 -72302740 - L1Md_F2 LINE L1 -1 6581 5990 4 1304 722 322 74 54 chrX 94347556 94347675 -72302621 + Lx8 LINE L1 7239 7372 -101 4 1304 368 217 55 9 chrX 94347711 94347841 -72302455 - L1_Rod LINE L1 -3402 2478 2356 4 1304 4423 269 67 80 chrX 94347848 94350515 -72299781 + Lx9 LINE L1 3239 5907 -1737 4 1304 5600 119 70 11 chrX 94350515 94351420 -72298876 - RMER17B LTR ERVK 0 958 1 4 1304 988 273 24 78 chrX 94351420 94351468 -72298828 + Lx9 LINE L1 5908 5950 -1694 4 1304 1036 288 96 9 chrX 94351490 94351813 -72298483 - ORR1D2 LTR MaLR -19 351 1 4 1304 872 258 131 0 chrX 94351844 94352096 -72298200 - ORR1D2-int LTR MaLR -52 1318 1034 4 1304 463 324 0 0 chrX 94352098 94352237 -72298059 - Lx8 LINE L1 -148 7325 7187 4 1304 1588 312 42 40 chrX 94352644 94353412 -72296884 + Lx9 LINE L1 6343 7111 -533 4 1304 2163 92 3 9 chrX 94353409 94353727 -72296569 - L1Md_F2 LINE L1 -161 6421 6106 4 1304 1061 188 0 0 chrX 94353719 94353921 -72296375 + L1Md_F LINE L1 359 560 -5959 4 1304 267 266 156 12 chrX 94354017 94354177 -72296119 - L1MB8 LINE L1 -186 5992 5810 4 1304 2121 228 73 4 chrX 94354229 94354762 -72295534 + Lx2B LINE L1 6418 6987 -13 4 1304 828 300 66 31 chrX 94354999 94355401 -72294895 + MER89 LTR ERV1 2 525 -34 4 1304 350 345 26 0 chrX 94355415 94355528 -72294768 + B1F SINE Alu 6 121 -28 4 1304 336 364 8 15 chrX 94355528 94355546 -72294750 + ID_B1 SINE B4 87 216 -8 4 1304 1239 229 114 7 chrX 94355562 94355897 -72294399 + Lx9 LINE L1 7137 7506 -138 4 1304 270 116 0 0 chrX 94355897 94355940 -72294356 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 4 1304 1239 229 114 7 chrX 94355940 94356061 -72294235 + Lx9 LINE L1 7507 7641 -3 4 1304 198 103 0 0 chrX 94356129 94356158 -72294138 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 4 1304 207 0 0 0 chrX 94356177 94356200 -72294096 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 1304 1134 65 0 0 chrX 94356200 94356338 -72293958 - B1_Mm SINE Alu -8 139 2 4 1304 189 0 0 0 chrX 94357841 94357862 -72292434 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1304 1691 32 27 9 chrX 94358832 94359087 -72291209 - L1Md_F3 LINE L1 0 6584 6357 4 1304 1842 40 4 0 chrX 94359087 94359315 -72290981 + L1Md_F3 LINE L1 6150 6378 -204 4 1304 458 276 40 24 chrX 94359352 94359478 -72290818 - B1F SINE Alu -2 147 20 4 1304 266 333 39 65 chrX 94359968 94360122 -72290174 - MIRc SINE MIR -116 152 3 4 1304 196 295 94 43 chrX 94360260 94360377 -72289919 - MIR3 SINE MIR -1 207 85 4 1304 251 311 27 0 chrX 94360750 94360824 -72289472 + ID4 SINE ID 5 80 -3 4 1304 2024 127 12 6 chrX 94360848 94361173 -72289123 + ORR1A2 LTR MaLR 1 327 0 4 1304 359 265 67 17 chrX 94361494 94361732 -72288564 - L1MA7 LINE L1 -4 6287 6038 4 1304 685 314 138 91 chrX 94362106 94362547 -72287749 - MT2A LTR ERVL -71 462 1 4 1304 3156 57 23 0 chrX 94363006 94363393 -72286903 + MTA_Mm LTR MaLR 1 396 0 4 1304 1111 293 60 38 chrX 94363497 94363894 -72286402 + MTD LTR MaLR 1 406 -13 4 1304 653 307 88 30 chrX 94363907 94364203 -72286093 + MTD-int LTR MaLR 3 315 -1265 4 1304 7007 27 0 0 chrX 94364459 94365318 -72284978 - L1Md_T LINE L1 -166 5717 4859 4 1304 7432 31 1 0 chrX 94365318 94366192 -72284104 + L1Md_T LINE L1 5708 6582 0 4 1304 296 231 9 19 chrX 94366196 94366302 -72283994 + L1_Mur3 LINE L1 860 964 -6764 4 1304 245 162 11 149 chrX 94366309 94366396 -72283900 + L1_Mur3 LINE L1 3864 3938 -1942 4 1304 1576 59 0 0 chrX 94366396 94366598 -72283698 + L1Md_A LINE L1 6378 6579 -3 4 1304 457 202 0 0 chrX 94366636 94366730 -72283566 + L1_Mur3 LINE L1 4514 4607 -1273 4 1304 6765 78 12 2 chrX 94366740 94367701 -72282595 - L1_Mus3 LINE L1 -12 6626 5656 5 1304 299 302 31 10 chrX 94367702 94367799 -72282497 - B2_Mm2 SINE B2 -96 99 1 5 1304 278 333 0 0 chrX 94368034 94368097 -72282199 - ID4_ SINE ID -3 80 18 5 1304 358 323 124 19 chrX 94368612 94368871 -72281425 - L2 LINE L2 -761 2658 2373 5 1304 1081 281 52 21 chrX 94368892 94369357 -72280939 - Lx7 LINE L1 -1328 6368 5890 5 1304 634 213 18 2 chrX 94369355 94369510 -72280786 - Lx7 LINE L1 -479 5821 5655 5 1304 564 332 5 27 chrX 94369528 94369748 -72280548 + Lx7 LINE L1 6419 6633 -1063 5 1304 28 29 0 0 chrX 94369748 94369783 -72280513 + AT_rich Low_complexity Low_complexity 1 35 0 5 1304 8709 93 38 2 chrX 94369959 94371601 -72278695 - Lx3A LINE L1 -7 6974 5276 5 20 1505 223 92 17 chrX 94371602 94372013 -72278283 + Lx7 LINE L1 6619 7060 -636 5 1305 1783 198 24 50 chrX 94372017 94372399 -72277897 - ORR1D1 LTR MaLR -2 372 1 5 1305 4108 242 82 45 chrX 94372399 94373716 -72276580 - ORR1D1-int LTR MaLR 0 1370 5 5 1305 1254 229 84 71 chrX 94373720 94373931 -72276365 - ORR1D1 LTR MaLR 0 374 176 5 1305 474 18 0 0 chrX 94373931 94373986 -72276310 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1305 1254 229 84 71 chrX 94373986 94374141 -72276155 - ORR1D1 LTR MaLR -199 175 4 5 1305 1100 233 25 0 chrX 94374143 94374388 -72275908 + Lx7 LINE L1 7058 7308 -388 5 1305 205 125 51 51 chrX 94374470 94374529 -72275767 + T-rich Low_complexity Low_complexity 2 60 0 5 1305 199 330 34 51 chrX 94374585 94374703 -72275593 - L2 LINE L2 -1008 2411 2296 5 1305 575 356 35 19 chrX 94375065 94375323 -72274973 + Lx8 LINE L1 6920 7181 -292 5 1305 26 30 0 0 chrX 94375599 94375632 -72274664 + AT_rich Low_complexity Low_complexity 1 33 0 5 1305 298 252 101 18 chrX 94375932 94376041 -72274255 - MIRm SINE MIR 0 276 159 5 1305 657 306 105 20 chrX 94376547 94376794 -72273502 - MER67B LTR ERV1 -238 423 156 5 1305 644 226 22 139 chrX 94377900 94378080 -72272216 + RSINE1 SINE B4 7 165 0 5 1305 441 0 0 0 chrX 94378081 94378130 -72272166 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1305 2122 113 30 21 chrX 94378306 94378640 -72271656 + IAPLTR1a_Mm LTR ERVK 1 337 0 5 1305 19131 57 35 20 chrX 94378640 94381265 -72269031 + IAPEz-int LTR ERVK 8 2670 -3811 5 1305 8228 46 9 18 chrX 94381246 94382333 -72267963 + IAPEz-int LTR ERVK 5403 6479 -2 5 1305 2122 113 30 21 chrX 94382335 94382669 -72267627 + IAPLTR1a_Mm LTR ERVK 1 337 0 5 1305 625 247 69 40 chrX 94382762 94382895 -72267401 + B3 SINE B2 39 179 -37 5 1305 351 0 0 0 chrX 94382895 94382934 -72267362 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 1305 393 22 0 0 chrX 94382934 94382979 -72267317 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1305 625 247 69 40 chrX 94382979 94383017 -72267279 + B3 SINE B2 180 215 -1 5 1305 215 315 35 53 chrX 94383057 94383171 -72267125 - PB1D9 SINE Alu -2 118 7 5 1305 4415 51 4 7 chrX 94383580 94384132 -72266164 + L1Md_F2 LINE L1 6020 6569 -13 5 1305 286 316 0 12 chrX 94384203 94384283 -72266013 + ID4_ SINE ID 5 83 0 5 1305 703 286 129 23 chrX 94384913 94385472 -72264824 - L1MA4 LINE L1 -307 6005 5396 5 1305 369 299 65 34 chrX 94385711 94386005 -72264291 + L1MD LINE L1 4961 5263 -883 5 1305 195 42 0 0 chrX 94386007 94386031 -72264265 + (TAA)n Simple_repeat Simple_repeat 3 26 0 5 1305 828 99 30 15 chrX 94386078 94386211 -72264085 + B1_Mus2 SINE Alu 13 147 0 5 1305 28282 98 20 7 chrX 94386215 94392384 -72257912 + L1_Mus1 LINE L1 237 6567 0 5 1305 225 0 0 0 chrX 94392395 94392420 -72257876 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 5 1305 332 396 0 0 chrX 94392718 94392814 -72257482 + PB1 SINE Alu 7 102 -25 5 1305 243 0 0 0 chrX 94392829 94392856 -72257440 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1305 230 264 74 98 chrX 94393063 94393185 -72257111 - MLT1A0 LTR MaLR -232 133 15 5 1305 428 278 95 17 chrX 94393767 94393998 -72256298 + L1MB7 LINE L1 4457 4705 -1441 5 1305 336 276 131 10 chrX 94394009 94394108 -72256188 + PB1D10 SINE Alu 6 116 -1 5 1305 375 211 41 58 chrX 94394109 94394230 -72256066 + L1MB7 LINE L1 5592 5710 -474 5 1305 4169 276 68 29 chrX 94394247 94397329 -72252967 - Lx9 LINE L1 -8 7636 4243 5 1305 25573 63 3 1 chrX 94397410 94401432 -72248864 - L1Md_F2 LINE L1 0 6582 2553 5 1305 350 261 124 48 chrX 94401419 94401628 -72248668 - Lx9 LINE L1 -6540 1068 844 5 1305 1158 136 11 0 chrX 94401752 94401928 -72248368 + B2_Mm1t SINE B2 2 179 -14 5 1305 259 245 101 101 chrX 94401975 94402084 -72248212 + B2_Mm2 SINE B2 47 155 -40 5 1305 414 0 0 0 chrX 94402084 94402130 -72248166 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 5 1305 356 303 40 27 chrX 94402297 94402446 -72247850 - Lx9 LINE L1 -6931 677 527 5 1305 302 277 86 19 chrX 94402493 94402655 -72247641 + L1MB7 LINE L1 5704 5876 -308 5 1305 4133 106 40 3 chrX 94402651 94403273 -72247023 - Lx3B LINE L1 -203 5683 5039 5 1305 8262 135 6 10 chrX 94403269 94404587 -72245709 + Lx3B LINE L1 5655 6967 -6 5 1305 242 323 0 0 chrX 94404700 94404793 -72245503 + (CA)n Simple_repeat Simple_repeat 1 93 0 5 1305 21 36 0 0 chrX 94404829 94404857 -72245439 + AT_rich Low_complexity Low_complexity 1 28 0 5 1305 220 385 0 0 chrX 94405855 94405938 -72244358 - MIR SINE MIR -97 111 29 5 1305 3650 86 12 2 chrX 94406427 94406930 -72243366 - L1_Mus1 LINE L1 0 6567 6060 5 1305 1762 50 0 0 chrX 94406930 94407148 -72243148 + L1Md_F2 LINE L1 5842 6059 -523 5 1305 191 326 0 0 chrX 94407246 94407292 -72243004 - L3 LINE CR1 -298 4191 4146 5 1305 461 333 44 135 chrX 94407499 94407818 -72242478 + B4 SINE B4 3 292 0 5 1305 243 295 0 0 chrX 94407818 94407930 -72242366 + (CA)n Simple_repeat Simple_repeat 1 112 0 5 1305 230 402 0 0 chrX 94408985 94409067 -72241229 - MER91A DNA Tip100 -114 82 1 5 1305 1466 342 57 14 chrX 94410036 94410702 -72239594 + Lx8 LINE L1 6327 7021 -452 5 1305 268 233 71 82 chrX 94410716 94410814 -72239482 - MLT2B5 LTR ERVL -418 97 1 5 1305 282 246 21 60 chrX 94411095 94411220 -72239076 + MTEb LTR MaLR 238 371 -8 5 1305 302 313 114 25 chrX 94411272 94411505 -72238791 - ORR1E LTR MaLR -113 257 1 5 1305 396 0 0 0 chrX 94412029 94412073 -72238223 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1305 498 274 52 0 chrX 94412532 94412667 -72237629 + MLT1D LTR MaLR 31 172 -333 5 1305 757 298 58 5 chrX 94412804 94413010 -72237286 + Lx8 LINE L1 7104 7320 -153 5 1305 243 189 0 0 chrX 94413019 94413072 -72237224 + G-rich Low_complexity Low_complexity 5 57 0 5 1305 441 158 0 0 chrX 94413354 94413436 -72236860 + (TA)n Simple_repeat Simple_repeat 1 82 0 5 1305 1166 295 35 43 chrX 94413473 94413965 -72236331 + Lx6 LINE L1 6947 7434 -26 5 1305 436 352 8 0 chrX 94415245 94415373 -72234923 + RSINE1 SINE B4 15 143 -22 5 1305 518 185 284 47 chrX 94415406 94415600 -72234696 - L1_Rod LINE L1 -130 5717 5478 5 1305 524 300 36 79 chrX 94415596 94416258 -72234038 + Lx9 LINE L1 5774 6496 -1148 5 1305 35080 70 2 3 chrX 94416276 94422463 -72227833 - L1Md_F2 LINE L1 -1 6584 308 5 1305 2479 309 39 29 chrX 94422463 94423415 -72226881 + Lx9 LINE L1 6483 7443 -201 5 1305 420 20 0 0 chrX 94423437 94423486 -72226810 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1305 390 333 11 0 chrX 94424231 94424318 -72225978 - ID_B1 SINE B4 -20 204 117 5 1305 234 0 0 0 chrX 94424404 94424430 -72225866 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 5 1305 283 261 85 21 chrX 94425239 94425333 -72224963 + L1M5 LINE L1 5555 5654 -470 5 1305 884 316 81 21 chrX 94425436 94425857 -72224439 - Lx8 LINE L1 -128 7345 6900 5 1305 245 29 29 0 chrX 94425925 94425959 -72224337 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1305 273 119 0 0 chrX 94426217 94426259 -72224037 + (T)n Simple_repeat Simple_repeat 1 42 0 5 1305 2040 277 26 32 chrX 94426283 94426905 -72223391 - Lx8 LINE L1 -587 6886 6269 5 1305 341 298 0 0 chrX 94426900 94426994 -72223302 - L1_Mur3 LINE L1 -1367 4513 4420 5 1305 1176 29 0 0 chrX 94427016 94427156 -72223140 + (GA)n Simple_repeat Simple_repeat 1 140 0 5 1305 239 333 0 13 chrX 94427257 94427336 -72222960 + MIR SINE MIR 53 130 -132 5 1305 289 325 38 0 chrX 94427638 94427718 -72222578 + PB1D10 SINE Alu 29 111 -6 5 1305 898 112 0 0 chrX 94427722 94427847 -72222449 - L1_Mm LINE L1 -312 5571 5447 5 1305 5130 56 18 3 chrX 94427847 94428505 -72221791 + L1_Mus1 LINE L1 5898 6565 -2 5 1305 6802 76 1 0 chrX 94428569 94429466 -72220830 + L1_Mm LINE L1 4637 5534 -349 5 1305 2159 219 118 89 chrX 94429469 94430338 -72219958 - RLTR13D6 LTR ERVK -7 895 1 5 1305 464 54 0 0 chrX 94430340 94430396 -72219900 + L1Md_F2 LINE L1 5531 5586 -297 5 1305 7794 57 4 7 chrX 94430397 94431395 -72218901 + L1Md_F2 LINE L1 5588 6582 0 5 1305 468 246 69 21 chrX 94431741 94431886 -72218410 - Lx7 LINE L1 -5 7691 7540 5 1305 453 19 0 0 chrX 94431887 94431941 -72218355 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1305 273 259 141 0 chrX 94433372 94433457 -72216839 + Lx7 LINE L1 5411 5507 -373 5 1305 473 251 206 5 chrX 94433471 94433675 -72216621 + Lx7 LINE L1 5624 5868 -1828 5 1305 796 333 37 0 chrX 94433685 94434009 -72216287 + Lx7 LINE L1 6976 7311 -385 5 1305 1129 239 73 2 chrX 94434021 94434427 -72215869 - Lx9 LINE L1 0 7644 7179 5 1305 239 202 33 22 chrX 94434964 94435055 -72215241 + (TA)n Simple_repeat Simple_repeat 2 93 0 5 1305 672 316 112 13 chrX 94435588 94435979 -72214317 + Lx8 LINE L1 7041 7470 -3 5 1305 24 0 0 0 chrX 94436758 94436782 -72213514 + AT_rich Low_complexity Low_complexity 1 24 0 5 1305 180 182 0 0 chrX 94436919 94436963 -72213333 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1305 1664 231 70 5 chrX 94437414 94437784 -72212512 - MTD LTR MaLR -14 405 12 5 1305 231 254 18 0 chrX 94437847 94437902 -72212394 + GA-rich Low_complexity Low_complexity 1 56 0 5 1305 1431 50 0 0 chrX 94437912 94438092 -72212204 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 5 1305 6995 120 17 7 chrX 94438092 94439643 -72210653 + L1_Mus3 LINE L1 5058 6633 -5 5 1305 302 363 25 25 chrX 94439882 94440043 -72210253 + L1M5 LINE L1 4387 4547 -1599 5 1305 1943 92 0 29 chrX 94440044 94440356 -72209940 - L1Md_F2 LINE L1 0 6582 6291 5 1305 296 113 112 23 chrX 94440416 94440510 -72209786 - Lx3A LINE L1 -8 7001 6882 5 1305 1937 78 119 38 chrX 94440508 94440828 -72209468 + Lx3_Mus LINE L1 5722 6067 -942 5 1305 206 128 26 0 chrX 94440886 94440925 -72209371 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 1305 221 227 0 43 chrX 94441042 94441088 -72209208 + B1_Mur4 SINE Alu 5 48 -102 5 1305 530 250 18 9 chrX 94441070 94441183 -72209113 + B3 SINE B2 17 130 -86 5 1305 333 254 85 32 chrX 94441287 94441535 -72208761 - L1MC LINE L1 -2094 4052 3792 5 1305 2958 56 7 34 chrX 94441610 94442017 -72208279 + MTA_Mm LTR MaLR 1 396 0 5 1305 534 103 0 0 chrX 94442048 94442126 -72208170 + (CA)n Simple_repeat Simple_repeat 1 78 0 6 1305 1868 176 37 103 chrX 94442704 94443217 -72207079 - RMER6C LTR ERVK 0 690 212 6 1305 7257 177 147 61 chrX 94443218 94444379 -72205917 - Lx6 LINE L1 -1522 5938 4630 6 1305 435 38 0 0 chrX 94444379 94444432 -72205864 + (TC)n Simple_repeat Simple_repeat 1 53 0 6 1305 7257 179 55 59 chrX 94444432 94444923 -72205373 - Lx6 LINE L1 -1251 4629 4209 6 1305 1074 92 0 0 chrX 94444923 94445065 -72205231 - B1_Mus1 SINE Alu -5 143 2 6 1305 7257 179 55 59 chrX 94445065 94445578 -72204718 - Lx6 LINE L1 -1672 4208 3676 6 1305 314 0 0 0 chrX 94445573 94445610 -72204686 + L1_Mus4 LINE L1 6292 6328 -308 6 1305 363 250 0 0 chrX 94445625 94445717 -72204579 + Lx7 LINE L1 6092 6183 -1513 6 1305 3049 265 53 45 chrX 94445715 94446447 -72203849 + Lx6 LINE L1 6452 7195 -265 6 1305 315 0 0 0 chrX 94446447 94446482 -72203814 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1305 3049 265 53 45 chrX 94446482 94446690 -72203606 + Lx6 LINE L1 7196 7400 -60 6 1305 366 246 67 50 chrX 94447494 94447674 -72202622 - L1MB3 LINE L1 -2 6181 5999 6 1305 288 70 0 0 chrX 94447683 94447726 -72202570 + (CTTG)n Simple_repeat Simple_repeat 2 44 0 6 1305 396 103 0 0 chrX 94447727 94447785 -72202511 + (TTCTC)n Simple_repeat Simple_repeat 4 61 0 6 1305 865 283 58 45 chrX 94448060 94448728 -72201568 + Lx8 LINE L1 5305 5976 -1668 6 1305 557 139 9 0 chrX 94448775 94448883 -72201413 + (GA)n Simple_repeat Simple_repeat 2 110 0 6 1305 2513 177 35 8 chrX 94449103 94449582 -72200714 - RLTR11A2 LTR ERVK -33 494 3 6 1305 482 307 47 17 chrX 94449839 94450071 -72200225 + Lx8 LINE L1 7198 7436 -37 6 1305 35003 33 2 8 chrX 94450157 94455357 -72194939 + L1Md_T LINE L1 422 5586 -297 6 1305 8234 42 0 0 chrX 94455357 94456369 -72193927 + L1Md_T LINE L1 5587 6582 0 6 1305 3662 278 40 35 chrX 94457661 94458931 -72191365 - Lx9 LINE L1 -1 7643 6367 6 1305 1789 198 101 0 chrX 94459039 94459493 -72190803 - Lx9 LINE L1 -8 7636 7137 6 1305 227 216 26 26 chrX 94459510 94459586 -72190710 - L1_Rod LINE L1 -2105 3742 3667 6 1305 4406 229 35 49 chrX 94459596 94461145 -72189151 - L1_Rod LINE L1 -2327 3520 1994 6 1305 1608 169 7 3 chrX 94461152 94461448 -72188848 + Lx4B LINE L1 6328 6624 -434 6 1305 11443 112 2 20 chrX 94461447 94462226 -72188070 + L1_Mus1 LINE L1 4066 4813 -1070 6 1305 3045 26 2 114 chrX 94462226 94462665 -72187631 - RLTR10 LTR ERVK 0 390 1 6 1305 11443 87 7 13 chrX 94462665 94464474 -72185822 + L1_Mus1 LINE L1 4814 6567 0 6 1305 500 96 0 0 chrX 94464479 94464552 -72185744 + Lx4B LINE L1 6618 6690 -368 6 1305 281 219 0 15 chrX 94464552 94464617 -72185679 - RMER17C LTR ERVK -672 286 223 6 1305 505 135 0 11 chrX 94464620 94464710 -72185586 - RMER17C-int LTR ERVK -991 2247 2159 6 1305 2049 159 128 29 chrX 94464730 94465215 -72185081 - RMER17C-int LTR ERVK -1204 2034 1502 6 1305 2005 214 75 49 chrX 94466067 94466641 -72183655 - RMER17C-int LTR ERVK -2648 590 2 6 1305 1006 169 55 33 chrX 94466643 94466853 -72183443 - RMER17C LTR ERVK 0 410 201 6 1305 1003 132 6 6 chrX 94466853 94467028 -72183268 + (GGAGA)n Simple_repeat Simple_repeat 1 175 0 6 1305 1006 169 55 33 chrX 94467028 94467092 -72183204 - RMER17C LTR ERVK -210 200 130 6 1305 1536 90 4 5 chrX 94467105 94467333 -72182963 - ORR1A1 LTR MaLR 0 374 146 6 1305 696 190 12 41 chrX 94467301 94467471 -72182825 - RMER17C LTR ERVK -245 165 1 6 1305 2048 145 74 64 chrX 94467518 94467939 -72182357 - RLTR23 LTR ERV1 0 430 6 6 1305 303 167 17 0 chrX 94468026 94468086 -72182210 - RLTR42-int LTR ERVK -3663 1859 1799 6 1305 453 261 126 11 chrX 94468220 94468410 -72181886 - RLTR42-int LTR ERVK -3774 1748 1537 6 1305 2448 151 10 15 chrX 94468583 94468992 -72181304 - Lx4A LINE L1 -3 7055 6649 6 1305 5134 101 11 3 chrX 94469599 94470327 -72179969 - L1_Mus1 LINE L1 -1 6566 5833 6 1305 717 118 0 0 chrX 94470870 94470980 -72179316 + (GA)n Simple_repeat Simple_repeat 1 110 0 6 1305 1668 254 93 41 chrX 94471191 94471848 -72178448 - L1_Rod LINE L1 -6281 891 201 6 1305 1956 128 20 78 chrX 94471947 94472294 -72178002 - ORR1A2 LTR MaLR 0 327 1 6 1305 5648 161 82 104 chrX 94472436 94474551 -72175745 - Lx4B LINE L1 -70 6988 4636 6 1305 812 165 0 0 chrX 94474551 94474678 -72175618 + B2_Mm2 SINE B2 1 127 -68 6 1305 5648 161 82 104 chrX 94474678 94474988 -72175308 - Lx4B LINE L1 -70 4635 4289 6 1305 1393 189 48 70 chrX 94475083 94475413 -72174883 + RMER6C LTR ERVK 368 690 0 6 1305 340 169 24 0 chrX 94475469 94475552 -72174744 - Lx4B LINE L1 -3000 2880 2796 6 1305 8101 62 7 1 chrX 94475594 94477378 -72172918 - L1Md_F2 LINE L1 -11 6571 4775 6 1305 3777 195 41 5 chrX 94477359 94478289 -72172007 - Lx4B LINE L1 -3690 2190 1228 6 1305 1679 231 112 40 chrX 94478289 94478938 -72171358 - RMER13B LTR ERVK -8 950 293 6 1305 1312 203 128 42 chrX 94478946 94479353 -72170943 - RMER17B LTR ERVK -516 442 1 6 1305 553 260 158 58 chrX 94479358 94479440 -72170856 - Lx4B LINE L1 -6505 1223 1145 6 1305 642 65 75 0 chrX 94479440 94479547 -72170749 - L1_Mus3 LINE L1 -8 6630 6516 6 1305 553 260 158 58 chrX 94479547 94479811 -72170485 - Lx4B LINE L1 -6584 1144 842 6 1305 352 307 46 51 chrX 94479932 94480169 -72170127 - Lx4B LINE L1 -6883 845 610 6 1305 236 304 0 0 chrX 94480514 94480583 -72169713 - Lx4B LINE L1 -7294 434 366 6 1305 502 247 114 37 chrX 94480591 94481054 -72169242 - L1MA8 LINE L1 -468 5832 5327 6 1305 750 113 0 0 chrX 94481104 94481246 -72169050 + (TC)n Simple_repeat Simple_repeat 1 142 0 6 1305 306 73 0 0 chrX 94481246 94481287 -72169009 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1305 216 209 0 44 chrX 94481331 94481376 -72168920 - ID4 SINE ID -40 43 1 6 1305 372 195 84 0 chrX 94481395 94481490 -72168806 - PB1D10 SINE Alu -5 122 11 6 1305 249 287 72 24 chrX 94481593 94481718 -72168578 - L1MA8 LINE L1 -1177 4966 4836 6 1305 2141 200 24 2 chrX 94482197 94482608 -72167688 - MTC LTR MaLR -1 420 1 6 1305 234 312 82 34 chrX 94482685 94482831 -72167465 - MIRb SINE MIR -35 233 81 6 1305 201 74 0 0 chrX 94483521 94483548 -72166748 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1305 368 336 0 9 chrX 94483551 94483656 -72166640 - MT2A LTR ERVL -177 356 253 6 1305 288 111 0 0 chrX 94484130 94484184 -72166112 + (A)n Simple_repeat Simple_repeat 1 54 0 6 1305 213 333 36 71 chrX 94484215 94484227 -72166069 - ID_B1 SINE B4 -129 95 62 6 1305 246 273 0 52 chrX 94484227 94484285 -72166011 - ID4_ SINE ID -4 79 25 6 1305 213 333 36 71 chrX 94484285 94484299 -72165997 - ID SINE ID -129 61 15 6 1305 270 241 36 12 chrX 94484374 94484458 -72165838 + L1MB3 LINE L1 6068 6153 -30 6 1305 8395 50 4 1 chrX 94484463 94486257 -72164039 - L1Md_F3 LINE L1 -16 6568 4768 6 1305 21800 115 35 8 chrX 94486256 94489901 -72160395 + L1_Mm LINE L1 1771 5514 -369 6 1305 810 81 0 0 chrX 94489901 94490012 -72160284 + (GGGAA)n Simple_repeat Simple_repeat 1 111 0 6 1305 351 0 0 0 chrX 94490026 94490065 -72160231 + (T)n Simple_repeat Simple_repeat 1 39 0 6 1305 1493 143 37 27 chrX 94490065 94490359 -72159937 - ORR1D1 LTR MaLR -51 323 27 6 1305 421 229 238 0 chrX 94490559 94490681 -72159615 - B3 SINE B2 -1 215 65 6 1305 1231 322 41 15 chrX 94490972 94491559 -72158737 + Lx9 LINE L1 6449 7050 -594 6 1305 1473 112 0 0 chrX 94491602 94491807 -72158489 + MTB LTR MaLR 196 400 0 6 1305 871 142 40 0 chrX 94491807 94491955 -72158341 + MT2B LTR ERVL 408 561 -40 6 1305 4621 132 3 1 chrX 94491957 94492673 -72157623 + L1VL4 LINE L1 1 717 -5585 6 1305 2886 93 9 9 chrX 94492675 94493096 -72157200 + BGLII LTR ERVK 1 421 0 6 1305 481 122 0 0 chrX 94493530 94493604 -72156692 + RMER3D-int LTR ERVK 489 562 -2280 6 1305 289 238 61 45 chrX 94493632 94493764 -72156532 + RMER3D-int LTR ERVK 652 785 -2057 6 1305 571 85 9 0 chrX 94493889 94494000 -72156296 + RMER3D-int LTR ERVK 489 564 -2278 6 1305 714 108 0 80 chrX 94494000 94494261 -72156035 + GA-rich Low_complexity Low_complexity 1 240 0 6 1305 1885 158 112 16 chrX 94494287 94494779 -72155517 + RMER3D-int LTR ERVK 1014 1533 -1309 6 1305 508 191 25 34 chrX 94494824 94494943 -72155353 + RMER3D-int LTR ERVK 1547 1664 -1178 6 1305 2807 211 32 63 chrX 94494968 94495914 -72154382 + RMER3D-int LTR ERVK 1927 2842 0 6 1305 2793 107 2 12 chrX 94495914 94496339 -72153957 + BGLII LTR ERVK 1 421 0 6 1305 8777 126 13 4 chrX 94496339 94498011 -72152285 + MusHAL1 LINE L1 511 2197 -1156 6 1305 7166 82 1 1 chrX 94498009 94499077 -72151219 - L1Md_F2 LINE L1 -13 6569 5502 6 1305 3101 110 0 2 chrX 94499068 94499551 -72150745 - L1Md_F2 LINE L1 -945 4938 4457 6 1305 3911 2 0 0 chrX 94499547 94500000 -72150296 - L1Md_T LINE L1 0 6582 6130 6 163 37430 36 0 0 chrX 94500000 94504859 -72145437 - L1Md_T LINE L1 -453 6129 1271 1 1306 23717 94 14 7 chrX 94504858 94509171 -72141125 - L1Md_F LINE L1 -1386 4497 156 2 1306 18004 128 5 89 chrX 94509172 94509907 -72140389 + L1_Mus1 LINE L1 2746 3480 -2403 3 1306 3695 92 2 0 chrX 94509907 94510416 -72139880 + L1_Mus1 LINE L1 6055 6564 -3 4 1306 18004 128 5 89 chrX 94510416 94510455 -72139841 + L1_Mus1 LINE L1 3481 3497 -2386 3 1306 693 56 0 0 chrX 94510455 94510545 -72139751 + (CA)n Simple_repeat Simple_repeat 1 90 0 5 1306 396 0 0 0 chrX 94510545 94510588 -72139708 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 1306 18004 128 5 89 chrX 94510588 94512325 -72137971 + L1_Mus1 LINE L1 3498 5233 -650 3 1306 549 0 0 0 chrX 94512325 94512386 -72137910 + (TA)n Simple_repeat Simple_repeat 1 61 0 7 1306 18004 128 5 89 chrX 94512386 94512729 -72137567 + L1_Mus1 LINE L1 5234 5584 -299 3 1306 7273 78 9 14 chrX 94512729 94513720 -72136576 + L1Md_F2 LINE L1 5587 6572 -10 8 1306 18004 108 3 23 chrX 94513720 94514975 -72135321 + L1_Mus1 LINE L1 5585 6567 0 3 1306 7017 92 2 11 chrX 94514983 94516111 -72134185 + L1_Mus2 LINE L1 5447 6564 -2 9 1306 321 68 0 0 chrX 94516106 94516165 -72134131 + MusHAL1 LINE L1 2649 2707 -5 1 1306 288 186 0 0 chrX 94516303 94516362 -72133934 + GA-rich Low_complexity Low_complexity 3 61 0 1 1306 811 366 42 20 chrX 94516497 94516851 -72133445 - ORR1D2-int LTR MaLR -269 1311 950 1 1306 1003 286 62 80 chrX 94516848 94517297 -72132999 - ORR1D2-int LTR MaLR -808 450 10 1 1306 273 189 52 39 chrX 94517306 94517383 -72132913 - ORR1D2 LTR MaLR 0 419 342 1 1306 721 282 56 43 chrX 94517380 94517613 -72132683 - ORR1D2 LTR MaLR -134 236 1 1 1306 5301 145 95 32 chrX 94517637 94519487 -72130809 - L1Md_F LINE L1 -3897 1986 31 1 1306 231 229 32 16 chrX 94519554 94519616 -72130680 + MLT1D LTR MaLR 442 504 -1 1 1306 270 95 0 0 chrX 94519621 94519663 -72130633 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1306 398 20 20 0 chrX 94519663 94519713 -72130583 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 1306 439 358 10 5 chrX 94519719 94519927 -72130369 - Lx9 LINE L1 -195 7449 7241 1 1306 1594 300 93 22 chrX 94519925 94520558 -72129738 + Lx9 LINE L1 6511 7188 -456 1 1306 24 77 0 0 chrX 94520993 94521045 -72129251 + AT_rich Low_complexity Low_complexity 1 52 0 1 1306 1809 102 269 3 chrX 94521082 94521398 -72128898 - MTB LTR MaLR 0 400 1 1 1306 291 396 0 0 chrX 94521550 94521651 -72128645 + PB1D10 SINE Alu 2 102 -15 2 1306 1530 276 48 52 chrX 94522356 94522937 -72127359 + Lx8 LINE L1 6874 7452 -21 2 1306 287 161 21 0 chrX 94522937 94523030 -72127266 + (TCTCTG)n Simple_repeat Simple_repeat 5 99 0 2 1306 817 83 8 8 chrX 94523030 94523163 -72127133 + (TCTA)n Simple_repeat Simple_repeat 4 136 0 2 1306 204 375 73 40 chrX 94523265 94523415 -72126881 - L2 LINE L2 -347 3072 2918 2 1306 8712 110 19 16 chrX 94524237 94525598 -72124698 + Lx3A LINE L1 5636 6973 -8 2 1306 249 33 0 0 chrX 94525792 94525822 -72124474 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1306 1346 237 77 84 chrX 94525824 94526031 -72124265 - MTD LTR MaLR -18 401 197 2 1306 2481 62 9 0 chrX 94526031 94526354 -72123942 - L1_Mus1 LINE L1 -1 6566 6241 2 1306 1346 237 77 84 chrX 94526354 94526538 -72123758 - MTD LTR MaLR -223 196 13 2 1306 459 176 0 0 chrX 94527487 94527578 -72122718 + GA-rich Low_complexity Low_complexity 2 92 0 2 1306 632 312 94 10 chrX 94527672 94528290 -72122006 - L1MB7 LINE L1 -1 6178 5450 3 1306 863 143 7 28 chrX 94528671 94528815 -72121481 + B1_Mur3 SINE Alu 1 141 -8 3 1306 423 0 0 0 chrX 94528817 94528864 -72121432 + (CCA)n Simple_repeat Simple_repeat 3 49 0 3 1306 224 196 0 42 chrX 94531207 94531255 -72119041 + CT-rich Low_complexity Low_complexity 3 48 0 3 1306 289 387 0 0 chrX 94531327 94531438 -72118858 - PB1D10 SINE Alu -2 115 5 3 1306 217 228 0 25 chrX 94533351 94533432 -72116864 + (TA)n Simple_repeat Simple_repeat 2 80 0 3 1306 315 335 50 31 chrX 94533442 94533664 -72116632 + MIRc SINE MIR 10 235 -33 3 1306 233 29 0 29 chrX 94534597 94534632 -72115664 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 1306 8457 20 0 2 chrX 94534634 94536208 -72114088 - L1Md_T LINE L1 -11 6571 5001 3 1306 22 35 0 0 chrX 94538064 94538093 -72112203 + AT_rich Low_complexity Low_complexity 1 29 0 3 1306 504 117 0 0 chrX 94539490 94539567 -72110729 + (T)n Simple_repeat Simple_repeat 1 77 0 4 1306 1120 69 7 0 chrX 94539567 94539712 -72110584 - B1_Mus2 SINE Alu 0 147 2 4 1306 261 268 82 10 chrX 94539716 94539814 -72110482 + Charlie9 DNA MER1_type 1 105 -2652 4 1306 4160 208 83 27 chrX 94540458 94541599 -72108697 + Lx7 LINE L1 5531 6748 -948 4 1306 22 0 0 0 chrX 94541811 94541833 -72108463 + AT_rich Low_complexity Low_complexity 1 22 0 4 1306 535 257 112 65 chrX 94542310 94542523 -72107773 + L1MDb LINE L1 908 1137 -5403 4 1306 3273 51 2 2 chrX 94542523 94542919 -72107377 - MTA_Mm LTR MaLR 0 396 1 4 1306 535 257 112 65 chrX 94542919 94543072 -72107224 + L1MDb LINE L1 1138 1291 -5249 4 1306 405 348 49 7 chrX 94543084 94543226 -72107070 - B1F1 SINE Alu -1 148 1 4 1306 413 329 102 46 chrX 94543242 94543545 -72106751 + L1MDb LINE L1 1307 1626 -5007 4 1306 987 261 39 18 chrX 94543578 94543913 -72106383 + RLTR15 LTR ERVK 1 342 -17 4 1306 225 0 0 0 chrX 94543970 94543995 -72106301 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1306 197 0 71 0 chrX 94543995 94544022 -72106274 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 5 1306 226 311 44 35 chrX 94544203 94544406 -72105890 + L1MDb LINE L1 1852 2056 -4577 4 1306 2587 236 113 53 chrX 94544459 94545550 -72104746 + Lx9 LINE L1 4068 5223 -624 5 1306 243 258 35 70 chrX 94545604 94545746 -72104550 + Lx9 LINE L1 6109 6245 -1399 5 1306 1154 284 14 3 chrX 94545774 94546057 -72104239 + Lx9 LINE L1 6353 6638 -1006 5 1306 1515 53 24 5 chrX 94546139 94546349 -72103947 - L1_Mus3 LINE L1 -71 6567 6354 5 1306 3012 206 35 23 chrX 94546341 94547036 -72103260 + Lx9 LINE L1 6681 7383 -261 5 1306 1733 174 57 62 chrX 94547242 94547610 -72102686 + ORR1C1 LTR MaLR 13 378 0 5 1306 518 290 72 20 chrX 94547612 94547960 -72102336 + L1MDb LINE L1 2234 2599 -4034 4 1306 37 69 0 0 chrX 94548415 94548487 -72101809 + AT_rich Low_complexity Low_complexity 1 72 0 5 1306 730 310 29 45 chrX 94549302 94549744 -72100552 - L1M2 LINE L1 -1209 5636 5202 5 1306 978 266 94 13 chrX 94549745 94549951 -72100345 - MTD LTR MaLR -14 405 193 5 1306 513 0 0 0 chrX 94549951 94550008 -72100288 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1306 978 269 116 8 chrX 94550008 94550073 -72100223 - MTD LTR MaLR -227 192 120 5 1306 1618 107 86 217 chrX 94550073 94550552 -72099744 + Lx2 LINE L1 6581 6996 -1 5 1306 452 209 142 9 chrX 94550633 94550739 -72099557 - MTD LTR MaLR -299 120 1 5 1306 836 279 26 13 chrX 94550766 94551071 -72099225 - L1_Mur3 LINE L1 -1794 4086 3778 5 1306 1136 64 0 0 chrX 94551147 94551288 -72099008 + B1_Mus1 SINE Alu 2 142 -6 6 1306 546 16 0 0 chrX 94551293 94551356 -72098940 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 6 1306 1249 237 102 42 chrX 94551372 94551725 -72098571 + ORR1D1 LTR MaLR 1 374 0 6 1306 372 277 127 48 chrX 94551759 94551865 -72098431 - L1M2 LINE L1 -2543 4302 4177 5 1306 282 56 0 0 chrX 94551865 94551901 -72098395 + (TTA)n Simple_repeat Simple_repeat 1 36 0 6 1306 372 276 130 56 chrX 94551901 94552330 -72097966 - L1M2 LINE L1 -2643 4202 3742 5 1306 789 364 7 65 chrX 94552335 94552629 -72097667 - B4A SINE B4 -10 282 6 6 1306 396 0 0 0 chrX 94552869 94552913 -72097383 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 1306 298 295 0 0 chrX 94553158 94553253 -72097043 - L1M2 LINE L1 -4385 2464 2370 5 1306 441 0 0 0 chrX 94553265 94553314 -72096982 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 6 1306 1258 304 8 5 chrX 94553418 94553802 -72096494 - Lx9 LINE L1 -175 7469 7085 6 1306 2404 73 6 0 chrX 94553998 94554313 -72095983 - L1_Mus1 LINE L1 -2 6565 6249 6 1306 1360 86 25 0 chrX 94554313 94554510 -72095786 + L1_Mus3 LINE L1 5809 6010 -556 6 1306 2214 88 19 3 chrX 94555474 94555794 -72094502 + L1_Mus3 LINE L1 6313 6637 -1 6 1306 261 0 0 0 chrX 94557029 94557058 -72093238 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1306 301 276 71 10 chrX 94557356 94557455 -72092841 - MIR SINE MIR -42 220 116 7 1306 192 385 37 28 chrX 94557580 94557687 -72092609 - MIRc SINE MIR -40 228 121 7 1306 2763 31 0 0 chrX 94557936 94558262 -72092034 - L1Md_T LINE L1 -2 6580 6255 7 1306 297 0 0 0 chrX 94558262 94558295 -72092001 + (T)n Simple_repeat Simple_repeat 1 33 0 7 1306 256 177 12 48 chrX 94559927 94560010 -72090286 + A-rich Low_complexity Low_complexity 5 84 0 7 1306 249 324 27 36 chrX 94560075 94560187 -72090109 - L1ME2 LINE L1 -100 6064 5954 7 1306 22 0 0 0 chrX 94560683 94560705 -72089591 + AT_rich Low_complexity Low_complexity 1 22 0 7 1306 2294 61 3 7 chrX 94562156 94562451 -72087845 - L1_Mus1 LINE L1 -2 6565 6272 7 1306 2505 76 9 0 chrX 94562452 94562796 -72087500 + L1_Mus1 LINE L1 5926 6272 -295 7 1306 256 370 105 5 chrX 94562796 94562986 -72087310 + LTR16D LTR ERVL 157 365 -286 7 1306 1278 263 133 37 chrX 94562990 94563747 -72086549 + L1MB7 LINE L1 5334 6163 -21 8 1306 268 350 25 8 chrX 94564944 94565065 -72085231 - MER5B DNA MER1_type -39 139 17 8 1306 817 344 79 26 chrX 94565213 94565806 -72084490 + L2a LINE L2 2793 3426 0 8 1306 2182 68 34 7 chrX 94565830 94566127 -72084169 - L1_Mus2 LINE L1 -1 6565 6261 8 1306 237 196 0 38 chrX 94566948 94567001 -72083295 + MIRc SINE MIR 196 246 -22 8 1306 22 80 0 0 chrX 94567832 94567882 -72082414 + AT_rich Low_complexity Low_complexity 1 50 0 8 1306 333 0 0 0 chrX 94568739 94568776 -72081520 + (TA)n Simple_repeat Simple_repeat 1 37 0 8 1306 285 131 0 0 chrX 94569416 94569477 -72080819 + (T)n Simple_repeat Simple_repeat 1 61 0 8 1306 269 307 113 45 chrX 94569925 94570058 -72080238 - MIRb SINE MIR -39 229 88 8 1306 228 360 62 9 chrX 94570688 94570800 -72079496 + L2c LINE L2 3019 3136 -251 8 1306 637 271 25 68 chrX 94570791 94571028 -72079268 - MIR SINE MIR 0 262 36 9 1306 335 331 73 45 chrX 94571029 94571206 -72079090 + ID_B1 SINE B4 38 219 -5 9 1306 206 119 48 0 chrX 94571267 94571309 -72078987 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 9 1306 339 127 0 0 chrX 94573424 94573487 -72076809 + (CATA)n Simple_repeat Simple_repeat 2 64 0 9 1306 262 373 21 14 chrX 94573831 94573975 -72076321 - MER5A1 DNA MER1_type -2 164 20 9 1306 192 40 0 0 chrX 94574525 94574550 -72075746 + (A)n Simple_repeat Simple_repeat 1 25 0 9 1306 277 299 158 37 chrX 94574822 94575037 -72075259 + L2 LINE L2 2716 2956 -463 9 1306 198 0 0 0 chrX 94576500 94576522 -72073774 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 9 1306 779 113 0 8 chrX 94576563 94576697 -72073599 - L1_Mus2 LINE L1 -10 6574 6445 9 1306 1246 327 49 32 chrX 94578037 94578666 -72071630 + Lx8 LINE L1 6686 7325 -148 9 1306 180 362 0 0 chrX 94579261 94579341 -72070955 - MIRb SINE MIR -103 165 86 1 1306 181 380 0 39 chrX 94579481 94579585 -72070711 + MIRm SINE MIR 78 177 -99 1 1306 812 299 108 30 chrX 94579701 94580036 -72070260 + MLT1A0 LTR MaLR 1 361 -4 1 1306 828 84 0 0 chrX 94580900 94581019 -72069277 - L1_Mus1 LINE L1 0 6567 6449 1 1306 2540 60 0 3 chrX 94581019 94581355 -72068941 + L1_Mus1 LINE L1 6101 6435 -132 1 1306 365 138 12 0 chrX 94581779 94581859 -72068437 + (TA)n Simple_repeat Simple_repeat 1 81 0 1 1306 324 0 0 0 chrX 94581951 94581987 -72068309 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 1306 971 285 82 13 chrX 94581988 94582294 -72068002 + ORR1E LTR MaLR 19 345 -14 1 1306 567 303 23 23 chrX 94582360 94582576 -72067720 + B3 SINE B2 1 216 0 1 1306 83 58 0 0 chrX 94582576 94582715 -72067581 + AT_rich Low_complexity Low_complexity 1 139 0 1 1306 667 332 28 14 chrX 94582716 94582838 -72067458 + L1M3e LINE L1 4 123 -6907 1 1306 1733 164 118 19 chrX 94582838 94583087 -72067209 - RMER17C LTR ERVK 0 410 164 1 1306 231 36 0 0 chrX 94583087 94583115 -72067181 + (GGGGA)n Simple_repeat Simple_repeat 3 30 0 1 1306 1733 164 118 19 chrX 94583115 94583154 -72067142 - RMER17C LTR ERVK -247 163 95 1 1306 270 0 0 0 chrX 94583154 94583184 -72067112 + (GA)n Simple_repeat Simple_repeat 2 31 0 1 1306 1733 164 118 19 chrX 94583184 94583267 -72067029 - RMER17C LTR ERVK -316 94 2 1 1306 667 332 28 14 chrX 94583267 94583434 -72066862 + L1M3e LINE L1 124 297 -6733 1 1306 628 314 55 4 chrX 94583427 94583702 -72066594 + Lx8 LINE L1 6655 6943 -530 1 1306 645 311 80 14 chrX 94583713 94584000 -72066296 - Lx8 LINE L1 -205 7268 6963 1 1306 2348 80 3 58 chrX 94584008 94584354 -72065942 + ORR1A2 LTR MaLR 1 327 0 1 1306 1204 247 92 64 chrX 94584356 94584715 -72065581 - ORR1D1 LTR MaLR 0 374 6 1 1306 698 307 64 25 chrX 94585226 94585633 -72064663 - L1_Rod LINE L1 -67 5780 5358 1 1306 1124 267 166 5 chrX 94585679 94586315 -72063981 - Lx9 LINE L1 -26 7618 6838 1 1306 1314 133 38 0 chrX 94586363 94586574 -72063722 + Lx3A LINE L1 6758 6976 -5 1 1306 700 209 171 74 chrX 94586585 94587033 -72063263 + RMER4B LTR ERVK 30 573 -12 1 1306 1769 253 60 0 chrX 94587035 94587517 -72062779 - Lx9 LINE L1 -810 6834 6324 1 1306 808 321 186 50 chrX 94587559 94588054 -72062242 - MLT-int LTR MaLR -4 1731 1170 1 1306 549 0 0 0 chrX 94588092 94588153 -72062143 + (TC)n Simple_repeat Simple_repeat 2 62 0 1 1306 207 0 0 0 chrX 94588318 94588341 -72061955 + (TGG)n Simple_repeat Simple_repeat 1 23 0 1 1306 243 0 0 0 chrX 94588341 94588368 -72061928 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 1306 393 22 0 0 chrX 94588368 94588413 -72061883 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 1306 567 221 41 75 chrX 94588781 94589002 -72061294 - ORR1C1 LTR MaLR 0 378 77 1 1306 3333 154 43 5 chrX 94590170 94590815 -72059481 - L1_Mur2 LINE L1 -1056 4821 4152 1 1306 343 55 0 52 chrX 94590804 94590862 -72059434 + L1_Mur1 LINE L1 4825 4879 -1007 1 1306 1101 95 0 0 chrX 94590862 94591010 -72059286 + B1_Mus1 SINE Alu 1 148 0 1 1306 5009 191 76 11 chrX 94591034 94593070 -72057226 + Lx4B LINE L1 4851 7050 -8 1 1306 396 287 107 0 chrX 94594366 94594516 -72055780 - MER58C DNA MER1_type -6 209 44 1 1306 206 286 98 11 chrX 94594791 94594883 -72055413 + MIRb SINE MIR 121 220 -48 1 1306 212 298 163 8 chrX 94594926 94595067 -72055229 + MIRb SINE MIR 15 188 -88 1 1306 201 176 0 0 chrX 94595352 94595386 -72054910 + T-rich Low_complexity Low_complexity 1 34 0 1 1306 243 0 0 0 chrX 94596400 94596427 -72053869 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1306 585 0 0 0 chrX 94596427 94596491 -72053805 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 1306 2712 291 77 19 chrX 94596512 94597631 -72052665 - Lx9 LINE L1 -159 7485 6302 1 1306 195 146 0 0 chrX 94597717 94597758 -72052538 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1 1306 6580 119 15 14 chrX 94597773 94597888 -72052408 - Lx3A LINE L1 -6 6975 6870 1 1306 3729 123 161 96 chrX 94597888 94598739 -72051557 + RMER17A2 LTR ERVK 1 906 0 1 1306 6580 119 15 14 chrX 94598739 94599670 -72050626 - Lx3A LINE L1 -112 6869 5929 1 1306 5731 167 58 4 chrX 94599670 94600820 -72049476 - L1_Mur1 LINE L1 -5770 1212 1 1 1306 539 277 159 14 chrX 94600936 94601259 -72049037 - Lx9 LINE L1 -1672 5972 5580 1 1306 541 209 127 32 chrX 94601279 94601457 -72048839 + L1_Rod LINE L1 5570 5807 -349 1 1306 486 217 0 8 chrX 94601461 94601582 -72048714 - Lx9 LINE L1 -624 7020 6901 1 1306 695 220 73 24 chrX 94601593 94601840 -72048456 + L1_Rod LINE L1 4857 5115 -732 1 1306 438 318 69 5 chrX 94601863 94602081 -72048215 - Lx7 LINE L1 -929 6767 6536 1 1306 681 294 94 21 chrX 94602081 94602369 -72047927 + Lx7 LINE L1 7000 7308 -388 1 1306 222 238 0 56 chrX 94602396 94602485 -72047811 + T-rich Low_complexity Low_complexity 2 85 0 1 1306 452 284 36 29 chrX 94602570 94602708 -72047588 + RMER21B LTR ERV1 333 471 -371 1 1306 1208 238 4 4 chrX 94602860 94603130 -72047166 + RodERV21-int LTR ERV1 4 273 -4718 1 1306 1644 236 92 38 chrX 94603180 94603734 -72046562 + RodERV21-int LTR ERV1 400 983 -4008 1 1306 539 267 68 91 chrX 94604085 94604394 -72045902 + MYSERV6-int LTR ERVK 6840 7141 -1818 1 1306 285 98 0 0 chrX 94604754 94604795 -72045501 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1306 234 0 0 0 chrX 94604795 94604821 -72045475 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1306 207 0 0 0 chrX 94605300 94605323 -72044973 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1306 351 188 0 86 chrX 94605337 94605442 -72044854 + RLTR19-int LTR ERVK 1065 1160 -4977 1 1306 420 295 26 144 chrX 94605444 94605638 -72044658 + MTC-int LTR MaLR 468 629 -629 1 1306 2580 211 16 42 chrX 94605708 94605949 -72044347 - Lx6 LINE L1 -1245 6215 5974 1 1306 1841 209 92 40 chrX 94605949 94606502 -72043794 + RLTR31A_Mm LTR ERVK 1 582 -2 1 1306 2580 211 16 42 chrX 94606502 94606904 -72043392 - Lx6 LINE L1 -1487 5973 5589 1 1306 835 272 63 1 chrX 94606906 94607317 -72042979 + Lx5 LINE L1 6258 6863 -597 1 1306 202 353 43 22 chrX 94607626 94607765 -72042531 - MIR SINE MIR -10 252 111 1 1306 275 266 38 0 chrX 94608215 94608294 -72042002 - MLT1K LTR MaLR 0 595 514 1 1306 387 106 0 0 chrX 94608585 94608651 -72041645 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 1306 23 0 0 0 chrX 94608699 94608722 -72041574 + AT_rich Low_complexity Low_complexity 1 23 0 1 1306 1034 286 71 59 chrX 94609539 94610033 -72040263 + Lx8 LINE L1 6180 6679 -794 1 1306 1203 48 0 7 chrX 94610033 94610181 -72040115 + B1_Mm SINE Alu 1 147 0 1 1306 342 34 0 63 chrX 94610184 94610247 -72040049 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 1 1306 6231 35 0 0 chrX 94610283 94611019 -72039277 + L1Md_T LINE L1 5845 6580 -2 1 1306 1548 306 72 23 chrX 94611067 94611722 -72038574 + Lx8 LINE L1 6714 7400 -73 1 1306 1090 320 101 20 chrX 94611762 94612317 -72037979 - Lx8 LINE L1 -4 7469 6870 1 1306 1313 263 51 38 chrX 94612314 94613034 -72037262 - Lx8 LINE L1 -1476 5997 5226 1 1306 681 108 9 26 chrX 94613036 94613150 -72037146 - RMER4B LTR ERVK 0 585 474 1 1306 2697 105 12 14 chrX 94613175 94613590 -72036706 - L1_Mus3 LINE L1 -1 6637 6224 1 1306 2249 183 153 0 chrX 94613590 94614059 -72036237 - RMER4B LTR ERVK -15 570 30 1 1306 252 283 267 7 chrX 94614116 94614262 -72036034 + Lx8 LINE L1 7257 7440 -33 1 1306 9161 124 36 18 chrX 94614572 94616606 -72033690 - Lx2A LINE L1 0 7008 4938 1 1306 5088 48 12 9 chrX 94616606 94617259 -72033037 + L1Md_F2 LINE L1 5928 6582 0 1 1306 7827 167 25 6 chrX 94617259 94617827 -72032469 - Lx2A LINE L1 -940 4937 4362 1 1306 1483 300 215 42 chrX 94617838 94617887 -72032409 + MTE2a-int LTR MaLR 719 763 -817 1 1306 906 120 158 0 chrX 94617887 94618045 -72032251 + B2_Mm2 SINE B2 5 187 -8 1 1306 1483 300 215 42 chrX 94618045 94618730 -72031566 + MTE2a-int LTR MaLR 764 1580 0 1 1306 712 272 46 124 chrX 94618730 94619141 -72031155 + MTE2a LTR MaLR 1 379 0 1 1306 482 323 127 48 chrX 94619473 94619844 -72030452 - MLT1A1 LTR MaLR -8 400 1 1 1306 709 220 43 8 chrX 94620228 94620384 -72029912 - MTC LTR MaLR 0 421 210 1 1306 185 433 51 0 chrX 94620663 94620878 -72029418 + L2 LINE L2 2095 2320 -1099 1 1306 4916 189 13 12 chrX 94621043 94621277 -72029019 + RMER19B LTR ERVK 1 235 -667 1 1306 333 0 0 0 chrX 94621277 94621314 -72028982 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1306 262 18 91 0 chrX 94621314 94621369 -72028927 + (CAAA)n Simple_repeat Simple_repeat 1 60 0 1 1306 4916 189 13 12 chrX 94621369 94622034 -72028262 + RMER19B LTR ERVK 236 901 -1 1 1306 3747 282 62 66 chrX 94622185 94623938 -72026358 + Lx9 LINE L1 5652 7530 -114 1 1306 191 88 29 0 chrX 94623938 94623972 -72026324 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1306 3747 265 61 67 chrX 94623972 94624056 -72026240 + Lx9 LINE L1 7531 7608 -36 1 1306 2319 182 11 21 chrX 94624143 94624608 -72025688 - Lx2B LINE L1 0 7000 6541 1 1306 245 344 36 18 chrX 94624644 94624810 -72025486 - L2 LINE L2 -1006 2413 2245 1 1306 717 215 44 0 chrX 94625188 94625323 -72024973 + B1_Mur2 SINE Alu 2 142 -7 1 1306 3757 61 2 0 chrX 94625341 94625814 -72024482 + L1_Mus1 LINE L1 6093 6566 -1 1 1306 236 339 44 9 chrX 94626336 94626449 -72023847 - MIR SINE MIR -118 144 28 1 1306 1015 108 0 0 chrX 94627586 94627725 -72022571 + B1_Mus1 SINE Alu 1 139 -9 1 1306 208 0 62 0 chrX 94627725 94627757 -72022539 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1306 303 303 25 50 chrX 94627903 94627983 -72022313 - ID4 SINE ID 0 83 6 1 1306 398 321 37 7 chrX 94628001 94628136 -72022160 - B1F SINE Alu -9 140 2 1 1306 248 232 130 0 chrX 94628369 94628438 -72021858 - ID_B1 SINE B4 -42 182 105 1 1306 225 296 141 23 chrX 94628532 94628660 -72021636 - MIR SINE MIR -44 218 76 1 1306 212 184 122 0 chrX 94628855 94628904 -72021392 - PB1D10 SINE Alu 0 117 63 1 1306 648 259 22 0 chrX 94628861 94628996 -72021300 - ID_B1 SINE B4 -6 218 81 1 1306 359 320 54 9 chrX 94629365 94629543 -72020753 + MIRb SINE MIR 48 242 -26 1 1306 23 54 0 0 chrX 94630084 94630121 -72020175 + AT_rich Low_complexity Low_complexity 1 37 0 1 1306 447 346 27 49 chrX 94630451 94630636 -72019660 + ID_B1 SINE B4 18 198 -26 1 1306 224 365 7 73 chrX 94630517 94630653 -72019643 + B1_Mus1 SINE Alu 9 135 -13 2 1306 401 36 18 0 chrX 94631476 94631531 -72018765 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1306 344 325 65 30 chrX 94631588 94631956 -72018340 + L1M2 LINE L1 2652 3032 -3111 2 1306 982 271 105 6 chrX 94631972 94632306 -72017990 - ORR1D2 LTR MaLR -3 367 1 2 1306 1638 301 62 128 chrX 94632355 94632694 -72017602 - ORR1D2-int LTR MaLR -68 1441 1082 2 1306 2058 141 25 0 chrX 94632694 94633013 -72017283 - ORR1A2 LTR MaLR 0 327 1 2 163 2954 248 28 81 chrX 94633013 94634030 -72016266 - ORR1D2-int LTR MaLR -428 1081 174 2 1307 796 313 83 16 chrX 94634042 94634354 -72015942 - Lx8 LINE L1 -173 7300 6968 2 1307 2334 302 71 43 chrX 94634375 94634729 -72015567 - Lx8 LINE L1 -626 6847 6460 2 1307 2605 196 125 2 chrX 94634729 94635272 -72015024 - RMER19C LTR ERVK 0 611 2 2 1307 2334 302 71 43 chrX 94635272 94635827 -72014469 - Lx8 LINE L1 -1014 6459 5908 2 1307 1054 75 7 20 chrX 94635827 94635976 -72014320 + B1_Mus2 SINE Alu 1 147 0 2 1307 183 42 0 0 chrX 94635982 94636006 -72014290 + (CAA)n Simple_repeat Simple_repeat 2 25 0 2 1307 2334 292 93 26 chrX 94636006 94636572 -72013724 - Lx8 LINE L1 -1569 5904 5301 2 1307 24 0 0 0 chrX 94636591 94636615 -72013681 + AT_rich Low_complexity Low_complexity 1 24 0 2 1307 1691 280 59 19 chrX 94636932 94637610 -72012686 - Lx8 LINE L1 -592 5288 4584 2 1307 252 0 0 0 chrX 94637635 94637663 -72012633 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 2 1307 1277 209 75 16 chrX 94637768 94637811 -72012485 - Lx4A LINE L1 -644 6414 6370 2 1307 3001 152 29 6 chrX 94637811 94638321 -72011975 - Lx4B LINE L1 -16 7042 6521 2 1307 1277 209 75 16 chrX 94638321 94638597 -72011699 - Lx4A LINE L1 -689 6369 6077 2 1307 1772 227 176 2 chrX 94638583 94639055 -72011241 - Lx6 LINE L1 -392 7068 6515 2 1307 2710 268 66 46 chrX 94639051 94640213 -72010083 - Lx8 LINE L1 -2306 3574 2381 2 1307 1515 266 32 12 chrX 94640213 94640624 -72009672 - MTD LTR MaLR 0 419 1 2 1307 2710 268 66 46 chrX 94640624 94640885 -72009411 - Lx8 LINE L1 -3500 2380 2123 2 1307 466 260 30 0 chrX 94641065 94641165 -72009131 - B3 SINE B2 -5 211 109 2 1307 564 73 0 0 chrX 94645251 94645333 -72004963 + (CA)n Simple_repeat Simple_repeat 2 83 0 2 1307 1039 39 8 0 chrX 94645378 94645505 -72004791 + B1_Mm SINE Alu 2 129 -18 2 1307 6784 114 5 21 chrX 94645506 94646617 -72003679 + L1_Mus2 LINE L1 280 1330 -5304 2 1307 1922 44 0 0 chrX 94646616 94646844 -72003452 + L1Md_F2 LINE L1 5358 5585 -298 2 1307 7802 44 20 5 chrX 94646845 94647825 -72002471 + L1Md_F2 LINE L1 5587 6581 -1 2 1307 375 105 0 0 chrX 94647860 94647917 -72002379 + (TAAA)n Simple_repeat Simple_repeat 2 58 0 2 1307 6174 105 5 1 chrX 94648425 94649348 -72000948 - MusHAL1 LINE L1 -577 2135 1209 2 1307 10709 134 40 40 chrX 94649326 94651795 -71998501 + L1_Mus2 LINE L1 4093 6566 0 2 1307 422 219 25 0 chrX 94651778 94651897 -71998399 + Lx7 LINE L1 5332 5453 -427 2 1307 26 88 0 0 chrX 94651897 94651965 -71998331 + AT_rich Low_complexity Low_complexity 1 68 0 2 1307 5100 220 43 20 chrX 94651965 94652467 -71997829 + Lx7 LINE L1 5442 5950 -1746 2 1307 2671 94 39 2 chrX 94652467 94652873 -71997423 + BGLII LTR ERVK 1 421 0 2 1307 5100 240 53 25 chrX 94652873 94653892 -71996404 + Lx7 LINE L1 5951 7010 -686 2 1307 5140 106 53 0 chrX 94653891 94654663 -71995633 - Lx3_Mus LINE L1 -567 6442 5630 2 1307 3554 106 9 46 chrX 94654663 94654919 -71995377 + Lx3_Mus LINE L1 6459 6709 -300 2 1307 1037 104 21 0 chrX 94654919 94655063 -71995233 + B1_Mus1 SINE Alu 2 148 0 2 1307 3554 106 9 46 chrX 94655063 94655370 -71994926 + Lx3_Mus LINE L1 6710 7001 -8 2 1307 2462 238 166 38 chrX 94655370 94656356 -71993940 - Lx3_Mus LINE L1 -254 5632 4493 2 1307 405 0 0 0 chrX 94656478 94656523 -71993773 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 1307 308 370 28 6 chrX 94656567 94656749 -71993547 + Lx8 LINE L1 6227 6412 -1061 2 1307 241 259 11 23 chrX 94656876 94656963 -71993333 + Lx9 LINE L1 6161 6246 -1398 2 1307 406 187 50 43 chrX 94656973 94657113 -71993183 + Lx3B LINE L1 6829 6969 -4 2 1307 26 0 0 0 chrX 94657115 94657141 -71993155 + AT_rich Low_complexity Low_complexity 1 26 0 2 1307 281 328 61 0 chrX 94657153 94657284 -71993012 + Lx8 LINE L1 7239 7377 -96 2 1307 267 31 0 0 chrX 94657399 94657431 -71992865 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 2 1307 384 301 19 19 chrX 94657437 94657542 -71992754 + MLT1D LTR MaLR 254 358 -147 2 1307 30776 77 4 4 chrX 94657932 94659336 -71990960 + L1Md_F2 LINE L1 554 1958 -3925 2 1307 327 49 0 0 chrX 94659336 94659377 -71990919 + (CAA)n Simple_repeat Simple_repeat 2 42 0 2 1307 30776 87 6 6 chrX 94659377 94663005 -71987291 + L1Md_F2 LINE L1 1959 5584 -299 2 1307 7175 61 43 0 chrX 94663006 94663885 -71986411 + L1Md_F2 LINE L1 5587 6481 -101 2 1307 207 69 0 0 chrX 94663885 94663914 -71986382 + (TGGG)n Simple_repeat Simple_repeat 1 29 0 2 1307 7175 61 43 0 chrX 94663914 94663979 -71986317 + L1Md_F2 LINE L1 6482 6571 -11 2 1307 8745 84 0 1 chrX 94663979 94665140 -71985156 + L1_Mm LINE L1 4427 5587 -296 2 1307 7957 39 19 0 chrX 94665140 94666115 -71984181 + L1Md_F2 LINE L1 5588 6581 -1 2 1307 246 81 0 0 chrX 94666593 94666630 -71983666 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1307 232 147 13 13 chrX 94667285 94667361 -71982935 + T-rich Low_complexity Low_complexity 6 81 0 2 1307 347 269 115 70 chrX 94667890 94668046 -71982250 + MLT1J1 LTR MaLR 1 163 -281 2 1307 229 300 0 59 chrX 94668192 94668277 -71982019 + MLT1J1 LTR MaLR 357 436 -8 2 1307 2462 139 52 2 chrX 94669532 94670014 -71980282 - L1_Mur2 LINE L1 -3124 2753 2248 2 1307 3626 120 46 10 chrX 94670307 94670473 -71979823 - L1_Mur2 LINE L1 -3633 2244 2050 2 1307 402 57 0 0 chrX 94670473 94670526 -71979770 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 1307 3626 120 46 10 chrX 94670526 94671056 -71979240 - L1_Mur2 LINE L1 -3828 2049 1523 2 1307 2846 208 42 12 chrX 94671046 94671587 -71978709 + L1VL2 LINE L1 454 1094 -5540 2 1307 4159 51 0 6 chrX 94671587 94672101 -71978195 - L1Md_F2 LINE L1 -12 6570 6060 2 1307 16565 178 25 17 chrX 94672101 94675938 -71974358 + L1VL2 LINE L1 1095 4966 -920 2 1307 6115 131 25 1 chrX 94675935 94676006 -71974290 - Lx LINE L1 -48 6606 6535 2 1307 180 0 0 0 chrX 94676006 94676026 -71974270 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 2 1307 6115 136 27 1 chrX 94676026 94677227 -71973069 - Lx LINE L1 -120 6534 5290 2 1307 6618 77 7 21 chrX 94677240 94678184 -71972112 - L1_Mus2 LINE L1 -1 6565 5635 2 1307 1061 133 10 5 chrX 94678184 94678380 -71971916 - L1_Mur2 LINE L1 -579 5298 5102 2 1307 3942 176 44 33 chrX 94678381 94679328 -71970968 - L1_Mur2 LINE L1 -5883 1203 375 2 1307 951 192 76 4 chrX 94679331 94679582 -71970714 + L1_Rod LINE L1 617 885 -6287 2 1307 852 61 0 0 chrX 94679674 94679789 -71970507 + (GA)n Simple_repeat Simple_repeat 2 116 0 2 1307 558 29 0 0 chrX 94679789 94679813 -71970483 + (GAA)n Simple_repeat Simple_repeat 3 26 0 2 1307 1497 28 0 0 chrX 94679813 94679991 -71970305 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 2 1307 558 29 0 0 chrX 94679991 94680036 -71970260 + (GAA)n Simple_repeat Simple_repeat 3 47 0 2 1307 903 239 88 14 chrX 94680043 94680411 -71969885 + L1_Rod LINE L1 3678 4091 -2049 2 1307 400 258 85 0 chrX 94680415 94680537 -71969759 - ORR1D2 LTR MaLR -236 134 4 2 1307 1534 259 47 13 chrX 94680537 94680920 -71969376 + MTD LTR MaLR 1 396 -23 2 1307 2458 78 147 57 chrX 94680920 94681356 -71968940 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1307 14204 37 5 3 chrX 94681358 94683128 -71967168 - IAPEz-int LTR ERVK -2 6479 4708 2 1307 1802 84 12 0 chrX 94683155 94683406 -71966890 - IAPEz-int LTR ERVK -5183 2497 2244 2 1307 894 59 0 0 chrX 94683401 94683520 -71966776 - IAPEz-int LTR ERVK -5004 1477 1359 2 1307 3472 59 19 15 chrX 94683520 94684320 -71965976 - IAPEz-int LTR ERVK -5819 662 9 2 1307 2891 79 64 53 chrX 94684321 94684791 -71965505 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1307 236 367 23 15 chrX 94684824 94684954 -71965342 + L2a LINE L2 2605 2735 -684 2 1307 251 329 34 40 chrX 94685054 94685231 -71965065 + L1MDa LINE L1 191 366 -6174 2 1307 1511 296 67 48 chrX 94685354 94686120 -71964176 + Lx8 LINE L1 6685 7464 -9 2 1307 507 318 132 54 chrX 94686177 94686563 -71963733 + L1MDa LINE L1 1746 2161 -4472 2 1307 252 397 114 25 chrX 94686586 94686862 -71963434 + L2a LINE L2 2905 3204 -222 2 1307 32509 47 21 7 chrX 94687032 94692184 -71958112 + L1Md_A LINE L1 368 5586 -297 2 1307 8177 40 2 0 chrX 94692184 94693177 -71957119 + L1Md_A LINE L1 5587 6581 -1 2 1307 21402 35 1 0 chrX 94693177 94695889 -71954407 + L1Md_T LINE L1 2873 5586 -297 2 1307 8221 45 0 0 chrX 94695889 94696884 -71953412 + L1Md_T LINE L1 5587 6581 -1 2 1307 21 82 0 0 chrX 94697059 94697108 -71953188 + AT_rich Low_complexity Low_complexity 1 49 0 2 1307 1934 223 29 23 chrX 94697189 94697666 -71952630 - Lx6 LINE L1 -1135 6325 5846 2 1307 342 0 0 0 chrX 94697872 94697910 -71952386 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1307 762 93 0 0 chrX 94698098 94698206 -71952090 + (TA)n Simple_repeat Simple_repeat 2 109 0 2 1307 323 335 45 50 chrX 94698245 94698465 -71951831 - RMER2 LTR ERV1 -5 562 344 2 1307 1729 315 13 25 chrX 94698790 94699470 -71950826 - Lx9 LINE L1 -550 7094 6423 2 1307 231 373 57 77 chrX 94699587 94699716 -71950580 + MIR SINE MIR 31 163 -99 2 1307 2252 92 147 6 chrX 94699716 94700077 -71950219 - Lx LINE L1 -1 6653 6242 2 1307 231 373 57 77 chrX 94700077 94700156 -71950140 + MIR SINE MIR 164 235 -27 2 1307 399 197 15 15 chrX 94701125 94701259 -71949037 + Lx9 LINE L1 7511 7644 0 2 1307 3840 197 64 99 chrX 94701549 94702161 -71948135 - RMER19B LTR ERVK 0 902 246 2 1307 261 0 0 0 chrX 94702161 94702190 -71948106 + (TAG)n Simple_repeat Simple_repeat 3 31 0 2 1307 3840 197 64 99 chrX 94702190 94702512 -71947784 - RMER19B LTR ERVK -657 245 1 2 1307 197 33 0 32 chrX 94702660 94702691 -71947605 + (CAAAA)n Simple_repeat Simple_repeat 4 33 0 2 1307 778 306 3 87 chrX 94703122 94703444 -71946852 + MER121 Unknown Unknown 78 372 -40 2 1307 191 315 92 23 chrX 94703670 94703800 -71946496 - MIRc SINE MIR -20 248 110 2 1307 324 333 30 15 chrX 94704560 94704691 -71945605 - L1M2 LINE L1 -2408 3735 3603 2 1307 332 300 39 11 chrX 94704921 94705103 -71945193 + L1M2 LINE L1 5560 5746 -566 2 1307 339 346 0 22 chrX 94705111 94705247 -71945049 - Lx8 LINE L1 -881 6592 6460 2 1307 22615 86 3 3 chrX 94705252 94709504 -71940792 + L1Md_F LINE L1 392 4639 -1244 2 1307 8443 62 1 2 chrX 94709505 94711281 -71939015 - L1Md_F2 LINE L1 -98 6484 4712 2 1307 558 116 0 0 chrX 94711274 94711369 -71938927 + L1_Mm LINE L1 4258 4352 -1531 2 1307 1883 77 4 0 chrX 94711373 94711634 -71938662 + L1_Mus3 LINE L1 5660 5921 -717 2 1307 1195 99 16 5 chrX 94711639 94711831 -71938465 + L1_Mus3 LINE L1 6438 6631 -7 2 1307 1486 187 16 3 chrX 94711844 94712079 -71938217 - L1_Mm LINE L1 -1007 4876 4638 2 1307 189 74 0 0 chrX 94712079 94712106 -71938190 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1307 1486 187 16 3 chrX 94712106 94712186 -71938110 - L1_Mm LINE L1 -1246 4637 4558 2 1307 6140 102 6 0 chrX 94712183 94713094 -71937202 + L1_Mus4 LINE L1 5721 6636 0 2 1307 200 111 0 22 chrX 94713120 94713166 -71937130 + (TTTTTG)n Simple_repeat Simple_repeat 3 47 0 2 1307 1191 41 0 7 chrX 94713170 94713317 -71936979 - B1_Mm SINE Alu 0 147 2 2 1307 840 266 26 15 chrX 94713465 94713736 -71936560 - Lx8 LINE L1 -1513 5960 5687 2 1307 287 303 55 0 chrX 94713737 94713846 -71936450 + MLT-int LTR MaLR 224 338 -1397 2 1307 1057 156 124 4 chrX 94713850 94714076 -71936220 - Lx3C LINE L1 -2 6974 6722 2 1307 759 298 43 58 chrX 94714077 94714405 -71935891 + MLT-int LTR MaLR 267 589 -1146 2 1307 352 333 14 57 chrX 94715037 94715177 -71935119 + MLT-int LTR MaLR 646 779 -956 2 1307 2536 186 153 7 chrX 94715479 94716156 -71934140 - Lx4B LINE L1 0 7058 6255 2 1307 2998 167 27 0 chrX 94716163 94716714 -71933582 + Lx4B LINE L1 5682 6247 -811 2 1307 923 341 18 3 chrX 94716741 94717126 -71933170 + Lx8 LINE L1 6738 7128 -345 2 1307 238 281 71 30 chrX 94717174 94717273 -71933023 + MLT1A0 LTR MaLR 3 105 -260 2 1307 6243 127 34 9 chrX 94717452 94718486 -71931810 - Lx LINE L1 -8 6646 5587 2 1307 9098 159 52 6 chrX 94718481 94720299 -71929997 + Lx LINE L1 3667 5567 -316 2 1307 350 318 26 7 chrX 94721031 94721186 -71929110 - RMER15-int LTR ERVL -3365 1634 1477 2 1307 411 374 80 44 chrX 94721295 94721798 -71928498 - RMER15-int LTR ERVL -4449 550 30 2 1307 231 333 91 8 chrX 94721835 94721956 -71928340 - RMER15 LTR ERVL -14 561 431 2 1307 26 0 0 0 chrX 94722803 94722829 -71927467 + AT_rich Low_complexity Low_complexity 1 26 0 2 1307 563 144 70 23 chrX 94722840 94722968 -71927328 - Lx4A LINE L1 0 7058 6925 2 1307 4540 148 50 10 chrX 94722964 94723740 -71926556 + Lx4A LINE L1 6113 6919 -139 2 1307 1118 75 7 0 chrX 94723845 94723991 -71926305 + B1_Mm SINE Alu 1 147 0 3 1307 272 413 41 12 chrX 94724307 94724476 -71925820 - MIR SINE MIR -41 221 48 3 1307 304 224 81 10 chrX 94724519 94724618 -71925678 - L1MDa LINE L1 -1498 5039 4934 3 1307 555 306 13 30 chrX 94724816 94725052 -71925244 - L1MDa LINE L1 -3556 2981 2750 3 1307 301 70 17 17 chrX 94725493 94725551 -71924745 + (TTTTTG)n Simple_repeat Simple_repeat 3 60 0 3 1307 285 263 12 27 chrX 94725690 94725840 -71924456 - L1MDa LINE L1 -3873 2664 2513 3 1307 21 0 0 0 chrX 94726141 94726162 -71924134 + AT_rich Low_complexity Low_complexity 1 21 0 3 1307 521 165 10 0 chrX 94726162 94726259 -71924037 - B2_Mm2 SINE B2 -9 186 89 3 1307 2329 82 0 0 chrX 94726261 94726579 -71923717 - L1Md_F2 LINE L1 -487 5396 5079 3 1307 1487 35 0 0 chrX 94726561 94726735 -71923561 + L1Md_F2 LINE L1 5411 5584 -299 3 1307 6207 87 37 44 chrX 94726737 94727728 -71922568 + L1Md_F2 LINE L1 5587 6570 -12 3 1307 4386 84 2 2 chrX 94727728 94728325 -71921971 + L1Md_F2 LINE L1 4989 5585 -298 3 1307 7557 43 46 1 chrX 94728326 94729277 -71921019 + L1Md_F2 LINE L1 5587 6580 -2 3 1307 203 133 65 22 chrX 94729428 94729474 -71920822 + A-rich Low_complexity Low_complexity 3 50 0 3 1307 736 82 0 0 chrX 94729475 94729573 -71920723 - B2_Mm2 SINE B2 -97 98 1 3 1307 327 292 48 32 chrX 94729977 94730101 -71920195 + Lx7 LINE L1 7176 7301 -395 3 1307 1761 342 59 15 chrX 94730138 94730732 -71919564 - Lx8 LINE L1 -285 7188 6564 3 1307 516 45 0 0 chrX 94730732 94730799 -71919497 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 1307 1761 342 59 15 chrX 94730799 94731096 -71919200 - Lx8 LINE L1 -910 6563 6257 3 1307 212 173 0 37 chrX 94731419 94731473 -71918823 + (TATG)n Simple_repeat Simple_repeat 4 55 0 3 1307 218 200 0 0 chrX 94731560 94731610 -71918686 + T-rich Low_complexity Low_complexity 1 50 0 3 1307 301 340 42 43 chrX 94731631 94731929 -71918367 - Lx6 LINE L1 -38 7658 7273 3 1307 976 115 0 1 chrX 94731979 94732129 -71918167 + L1_Mm LINE L1 4726 4874 -1012 3 1307 1199 80 0 11 chrX 94732129 94732307 -71917989 + (TTTTC)n Simple_repeat Simple_repeat 5 180 0 3 1307 3927 53 4 0 chrX 94732313 94732826 -71917470 - L1_Mus1 LINE L1 0 6567 6080 3 1307 1904 58 0 0 chrX 94732826 94733068 -71917228 + L1_Mus1 LINE L1 5835 6076 -491 3 1307 862 159 51 0 chrX 94733057 94733214 -71917082 + L1_Mm LINE L1 4846 5010 -873 3 1307 1805 228 21 34 chrX 94733210 94733772 -71916524 - L1_Mur3 LINE L1 -2727 3153 2599 3 1307 3157 48 8 0 chrX 94733772 94734165 -71916131 - MTA_Mm LTR MaLR 0 396 1 3 1307 429 17 17 0 chrX 94734165 94734223 -71916073 - MTA_Mm-int LTR MaLR 0 1098 1040 3 1307 6778 41 11 0 chrX 94734235 94735072 -71915224 - L1Md_F3 LINE L1 0 6584 5739 3 1307 8121 33 2 3 chrX 94735072 94736608 -71913688 - L1Md_T LINE L1 -9 6573 5038 3 1307 7842 63 2 0 chrX 94736599 94737609 -71912687 - L1_Mm LINE L1 -182 5701 4690 3 1307 924 279 109 22 chrX 94737610 94737969 -71912327 - L1_Mur3 LINE L1 -7079 649 260 3 1307 200 128 0 25 chrX 94737981 94738021 -71912275 + (TTTG)n Simple_repeat Simple_repeat 3 41 0 3 1307 276 127 0 0 chrX 94738027 94738082 -71912214 + (T)n Simple_repeat Simple_repeat 1 55 0 3 1307 927 309 3 81 chrX 94738183 94738503 -71911793 + MTD LTR MaLR 1 295 -124 3 1307 1382 288 58 36 chrX 94738605 94738841 -71911455 + MTC-int LTR MaLR 2 234 -1024 3 1307 3261 35 5 2 chrX 94738841 94739236 -71911060 + MTA_Mm LTR MaLR 1 396 0 3 1307 1382 288 58 36 chrX 94739236 94739497 -71910799 + MTC-int LTR MaLR 235 510 -748 3 1307 188 266 24 60 chrX 94739560 94739644 -71910652 - L3 LINE CR1 -2416 2073 1993 3 1307 282 354 0 9 chrX 94739653 94739767 -71910529 - Lx8 LINE L1 -555 6918 6806 3 1307 1202 341 71 11 chrX 94739866 94740403 -71909893 - Lx8 LINE L1 -817 6656 6088 3 1307 582 204 0 22 chrX 94740535 94740670 -71909626 - Lx8 LINE L1 -1552 5921 5790 3 1307 287 294 43 0 chrX 94740826 94740918 -71909378 + L1_Mur1 LINE L1 235 330 -6654 3 1307 17470 116 17 9 chrX 94740907 94743983 -71906313 + L1_Mur1 LINE L1 912 4031 -1855 3 1307 581 222 5 53 chrX 94744275 94744465 -71905831 + RMER3D-int LTR ERVK 652 832 -2010 3 1307 573 183 21 7 chrX 94744465 94744608 -71905688 + GA-rich Low_complexity Low_complexity 2 146 0 3 1307 17658 136 29 32 chrX 94744618 94745385 -71904911 - Lx3A LINE L1 -944 6037 5263 3 1307 270 0 0 0 chrX 94745385 94745415 -71904881 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1307 17658 188 65 42 chrX 94745415 94747418 -71902878 - Lx3A LINE L1 -615 5262 3053 3 1307 1002 17 0 0 chrX 94747418 94747534 -71902762 + (TTC)n Simple_repeat Simple_repeat 2 117 0 3 1307 17658 188 65 42 chrX 94747534 94749137 -71901159 - Lx3A LINE L1 -2825 3052 1561 3 1307 734 100 0 0 chrX 94749133 94749243 -71901053 - Lx3A LINE L1 -5931 1053 944 3 1307 405 0 0 0 chrX 94749646 94749691 -71900605 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1307 287 304 0 18 chrX 94751639 94751753 -71898543 + CT-rich Low_complexity Low_complexity 2 113 0 3 1307 264 363 35 0 chrX 94751764 94751877 -71898419 - L2c LINE L2 -27 3360 3244 3 1307 266 0 29 0 chrX 94752030 94752064 -71898232 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1307 279 322 108 2 chrX 94752576 94752978 -71897318 + L1_Mur3 LINE L1 1386 1830 -4017 3 1307 439 305 112 16 chrX 94752990 94753310 -71896986 - Lx7 LINE L1 0 7696 7346 3 1307 6385 106 2 4 chrX 94753302 94754264 -71896032 - L1_Mm LINE L1 -2972 2911 1952 3 1307 380 111 0 16 chrX 94754264 94754328 -71895968 + (TTTC)n Simple_repeat Simple_repeat 2 64 0 3 1307 23 0 0 0 chrX 94754494 94754517 -71895779 + AT_rich Low_complexity Low_complexity 1 23 0 3 1307 31830 64 7 5 chrX 94754534 94756744 -71893552 - L1Md_F2 LINE L1 0 6582 4349 3 1307 3224 87 7 9 chrX 94756744 94757197 -71893099 - L1Md_F2 LINE L1 0 6582 6131 3 1307 31830 70 13 6 chrX 94757197 94757772 -71892524 - L1Md_F2 LINE L1 -1535 4348 3773 3 1307 447 19 0 0 chrX 94757772 94757824 -71892472 + (TTTA)n Simple_repeat Simple_repeat 3 54 0 3 1307 31830 70 13 6 chrX 94757824 94760091 -71890205 - L1Md_F2 LINE L1 -2111 3772 1504 3 1307 5168 92 15 1 chrX 94760098 94760820 -71889476 + L1_Mus2 LINE L1 5833 6564 -2 3 1307 7126 236 40 10 chrX 94760838 94762797 -71887499 - Lx7 LINE L1 -338 7358 5351 3 1307 4837 127 4 0 chrX 94762867 94763601 -71886695 - Lx3A LINE L1 -2 6979 6243 3 1307 3256 117 33 0 chrX 94763604 94764093 -71886203 + L1_Mur1 LINE L1 5261 5765 -121 3 1307 546 164 8 33 chrX 94764091 94764211 -71886085 - L1_Mur3 LINE L1 -3388 2492 2376 3 1307 2593 77 0 0 chrX 94764222 94764560 -71885736 - ORR1A1 LTR MaLR -8 338 1 3 163 3903 206 101 18 chrX 94764561 94765746 -71884550 - L1_Mur3 LINE L1 -3509 2371 1091 3 1308 183 129 0 0 chrX 94765956 94765987 -71884309 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 1308 5917 197 28 21 chrX 94765990 94768260 -71882036 - Lx2B LINE L1 -1 5885 2837 3 1308 11713 145 25 9 chrX 94768258 94769713 -71880583 - Lx2B LINE L1 -2492 3394 1925 3 1308 348 24 0 0 chrX 94769713 94769754 -71880542 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1308 231 36 0 0 chrX 94769754 94769781 -71880515 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 1308 11713 164 25 20 chrX 94769781 94770995 -71879301 - Lx2B LINE L1 -3962 1924 696 3 1308 228 263 0 0 chrX 94771147 94771204 -71879092 - Lx2B LINE L1 -6232 752 696 3 1308 1787 225 17 2 chrX 94771225 94771630 -71878666 - L1_Mur2 LINE L1 -6037 675 265 3 1308 1050 231 162 18 chrX 94771723 94772050 -71878246 + ORR1D1 LTR MaLR 1 374 0 3 1308 2550 98 6 0 chrX 94772056 94772415 -71877881 + L1_Mus1 LINE L1 6207 6567 0 3 1308 534 329 30 53 chrX 94772626 94772925 -71877371 - B4 SINE B4 0 292 1 3 1308 303 28 0 0 chrX 94773225 94773261 -71877035 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1308 666 85 0 0 chrX 94773263 94773357 -71876939 + (TC)n Simple_repeat Simple_repeat 1 94 0 3 1308 1951 186 44 65 chrX 94773371 94773801 -71876495 - MTC LTR MaLR 0 421 1 3 1308 1055 307 69 11 chrX 94774052 94774677 -71875619 + L1MA5 LINE L1 5477 6137 -163 3 1308 277 280 203 0 chrX 94775212 94775330 -71874966 - ORR1D2 LTR MaLR 0 359 218 3 1308 595 253 6 37 chrX 94775323 94775487 -71874809 - ORR1D2-int LTR MaLR -1097 273 115 3 1308 296 322 0 41 chrX 94775922 94776045 -71874251 - ORR1D2-int LTR MaLR -1251 119 2 3 1308 330 380 7 32 chrX 94776067 94776226 -71874070 - ORR1D2 LTR MaLR -102 257 93 3 1308 690 309 19 0 chrX 94776791 94776998 -71873298 - B3 SINE B2 -5 211 1 3 1308 407 362 93 52 chrX 94777176 94777245 -71873051 - MLT2D LTR ERVL -4 410 335 3 1308 672 77 0 0 chrX 94777245 94777336 -71872960 + (ATG)n Simple_repeat Simple_repeat 3 93 0 3 1308 407 362 93 52 chrX 94777336 94777465 -71872831 - MLT2D LTR ERVL -80 334 203 3 1308 2619 83 30 0 chrX 94777465 94777826 -71872470 + L1_Mus1 LINE L1 6196 6567 0 3 1308 397 362 93 52 chrX 94777826 94777894 -71872402 - MLT2D LTR ERVL -212 202 133 3 1308 360 332 28 12 chrX 94777912 94778183 -71872113 + Lx6 LINE L1 6214 6707 -753 3 1308 249 331 8 0 chrX 94778216 94778337 -71871959 + L1_Mur3 LINE L1 3895 4016 -1864 3 1308 629 301 73 29 chrX 94778359 94778564 -71871732 + B3 SINE B2 2 215 -1 3 1308 1974 254 26 32 chrX 94778576 94779236 -71871060 + L1VL4 LINE L1 139 794 -5508 3 1308 5965 108 11 33 chrX 94779233 94779321 -71870975 - MusHAL1 LINE L1 -1179 1533 1455 3 1308 6512 27 7 0 chrX 94779321 94780094 -71870202 - L1Md_F3 LINE L1 0 6584 5807 3 1308 5965 108 11 33 chrX 94780094 94781093 -71869203 - MusHAL1 LINE L1 -1258 1454 470 3 1308 1054 90 6 0 chrX 94781103 94781270 -71869026 - L1VL4 LINE L1 -5440 862 695 3 1308 6201 72 19 1 chrX 94781268 94782134 -71868162 - L1Md_F2 LINE L1 0 6582 5702 3 1308 14075 16 0 0 chrX 94782133 94784520 -71865776 - L1Md_A LINE L1 0 6582 4196 3 1308 11651 7 0 0 chrX 94784518 94785912 -71864384 + L1Md_A LINE L1 2799 4192 -1691 3 1308 31156 94 2 7 chrX 94785911 94791201 -71859095 - L1Md_F2 LINE L1 -166 5717 457 3 1308 1168 163 4 32 chrX 94791206 94791454 -71858842 - L1VL4 LINE L1 -5594 708 468 3 1308 395 254 0 35 chrX 94791580 94791723 -71858573 + Lx9 LINE L1 5904 6041 -1603 3 1308 2838 246 64 37 chrX 94791724 94792596 -71857700 + Lx9 LINE L1 6729 7624 -20 3 1308 406 340 116 3 chrX 94792878 94793170 -71857126 + Lx8 LINE L1 6874 7198 -275 3 1308 1196 68 0 0 chrX 94794187 94794333 -71855963 + B1_Mus2 SINE Alu 2 147 0 3 1308 225 154 0 0 chrX 94794333 94794372 -71855924 + GA-rich Low_complexity Low_complexity 2 40 0 3 1308 1760 196 22 6 chrX 94794372 94794997 -71855299 + L1_Mur2 LINE L1 940 1577 -4300 3 1308 9736 136 21 48 chrX 94795285 94797827 -71852469 - L1_Mus4 LINE L1 0 6636 4144 3 1308 497 320 81 48 chrX 94797830 94798125 -71852171 - RLTR16 LTR ERVK -200 305 1 3 1308 5416 221 49 10 chrX 94798125 94798597 -71851699 + L1_Mur2 LINE L1 1571 2059 -3818 3 1308 219 69 0 0 chrX 94798597 94798626 -71851670 + (CCA)n Simple_repeat Simple_repeat 1 29 0 3 1308 5416 221 49 10 chrX 94798626 94799566 -71850730 + L1_Mur2 LINE L1 2060 3037 -2840 3 1308 34828 66 1 25 chrX 94799567 94805657 -71844639 + L1Md_T LINE L1 99 5586 -297 3 1308 8042 56 0 0 chrX 94805657 94806690 -71843606 + L1Md_T LINE L1 5587 6582 0 3 1308 2670 154 21 23 chrX 94806690 94807093 -71843203 + L1_Mur2 LINE L1 3025 3437 -2440 3 1308 5954 76 9 0 chrX 94807093 94807879 -71842417 + L1_Mus2 LINE L1 5773 6565 -1 3 1308 2670 154 21 23 chrX 94807879 94808047 -71842249 + L1_Mur2 LINE L1 3438 3595 -2282 3 1308 629 208 64 0 chrX 94808047 94808172 -71842124 + RMER19B LTR ERVK 1 133 -769 3 1308 790 258 12 0 chrX 94808154 94808317 -71841979 + RMER19B LTR ERVK 56 220 -682 3 1308 3241 217 12 22 chrX 94808375 94809239 -71841057 + Lx5 LINE L1 6210 7054 -4 3 1308 34 42 0 0 chrX 94809771 94809819 -71840477 + AT_rich Low_complexity Low_complexity 1 48 0 3 1308 318 50 0 0 chrX 94811063 94811103 -71839193 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 3 1308 264 226 58 23 chrX 94812543 94812629 -71837667 + MER3 DNA MER1_type 112 200 -9 3 1308 272 316 0 21 chrX 94812667 94812764 -71837532 - Lx8 LINE L1 -1128 6516 6422 3 1308 301 293 41 19 chrX 94813029 94813259 -71837037 - Lx8 LINE L1 -1670 5974 5739 3 1308 189 0 0 0 chrX 94813380 94813401 -71836895 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 1308 2694 292 57 47 chrX 94813404 94814501 -71835795 - Lx9 LINE L1 -180 7464 6358 3 1308 405 296 23 17 chrX 94814644 94814816 -71835480 - Lx9 LINE L1 -1616 6028 5856 3 1308 229 211 0 0 chrX 94814896 94814948 -71835348 + A-rich Low_complexity Low_complexity 1 52 0 3 1308 1108 14 27 13 chrX 94815040 94815189 -71835107 + L1Md_F3 LINE L1 6432 6582 -2 4 1308 198 366 35 71 chrX 94815288 94815429 -71834867 + L2c LINE L2 3219 3354 -21 4 1308 209 343 96 34 chrX 94815716 94815894 -71834402 + MIRb SINE MIR 37 225 -43 4 1308 199 296 85 12 chrX 94816727 94816809 -71833487 - MIRb SINE MIR -68 200 113 4 1308 6100 58 0 10 chrX 94816839 94817625 -71832671 - L1Md_F2 LINE L1 -5 6577 5800 4 1308 369 63 0 16 chrX 94817813 94817877 -71832419 + L1_Mus2 LINE L1 6504 6566 0 4 1308 1125 321 28 23 chrX 94818345 94818782 -71831514 - Lx8 LINE L1 -737 6736 6298 4 1308 534 16 0 0 chrX 94818849 94818912 -71831384 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1308 225 267 0 0 chrX 94818982 94819042 -71831254 + CT-rich Low_complexity Low_complexity 1 60 0 4 1308 405 252 16 10 chrX 94819042 94819233 -71831063 - L1_Mur3 LINE L1 -777 5526 5307 4 1308 3403 259 65 12 chrX 94819401 94819754 -71830542 - L1_Mur3 LINE L1 -591 5289 4940 4 1308 612 27 0 0 chrX 94819754 94819828 -71830468 + (GA)n Simple_repeat Simple_repeat 1 74 0 4 1308 3403 259 65 12 chrX 94819828 94820350 -71829946 - L1_Mur3 LINE L1 -941 4939 4378 4 1308 459 35 0 0 chrX 94820350 94820407 -71829889 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1308 3403 259 65 12 chrX 94820407 94820804 -71829492 - L1_Mur3 LINE L1 -1503 4377 3950 4 1308 369 264 48 32 chrX 94820894 94821019 -71829277 - RMER15 LTR ERVL -44 531 405 4 1308 268 262 0 91 chrX 94821324 94821412 -71828884 - RMER15-int LTR ERVL -31 4968 4889 4 1308 330 362 21 11 chrX 94821767 94821957 -71828339 - RMER15-int LTR ERVL -412 4587 4396 4 1308 909 310 110 59 chrX 94821981 94822688 -71827608 - RMER15-int LTR ERVL -662 4337 3595 4 1308 893 190 138 5 chrX 94822710 94822906 -71827390 + ORR1B2 LTR MaLR 144 365 -2 4 1308 621 362 119 39 chrX 94822916 94823919 -71826377 - RMER15-int LTR ERVL -1422 3577 2495 4 1308 993 147 0 0 chrX 94823978 94824128 -71826168 - ORR1B1 LTR MaLR -55 339 190 4 1308 370 344 76 20 chrX 94824151 94824400 -71825896 - RMER15-int LTR ERVL -2717 2282 2020 4 1308 1700 176 34 11 chrX 94825208 94825564 -71824732 - Lx LINE L1 -1 6653 6290 4 1308 577 103 35 0 chrX 94825565 94825652 -71824644 + Lx LINE L1 6192 6281 -373 4 1308 405 138 11 0 chrX 94825652 94825739 -71824557 + L1_Mus3 LINE L1 6546 6633 -5 4 1308 799 146 0 0 chrX 94825740 94825870 -71824426 - L1_Mm LINE L1 -949 4934 4805 4 1308 734 254 70 137 chrX 94825870 94826198 -71824098 - ORR1D1 LTR MaLR -65 309 4 4 1308 1203 251 97 12 chrX 94826211 94826542 -71823754 + MTD LTR MaLR 45 403 -16 4 1308 2985 268 90 84 chrX 94826555 94826756 -71823540 + MTD-int LTR MaLR 2 212 -1046 4 1308 2567 77 84 8 chrX 94826756 94827124 -71823172 - MTA_Mm LTR MaLR 0 396 1 4 1308 2985 268 90 84 chrX 94827124 94827906 -71822390 + MTD-int LTR MaLR 213 956 -302 4 1308 1021 91 28 0 chrX 94827906 94828049 -71822247 + B1_Mm SINE Alu 1 147 0 4 1308 207 0 0 0 chrX 94828052 94828075 -71822221 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1308 2985 268 90 84 chrX 94828075 94828336 -71821960 + MTD-int LTR MaLR 957 1258 0 4 1308 787 300 154 10 chrX 94828361 94828654 -71821642 + MTD LTR MaLR 87 421 0 4 1308 473 146 0 22 chrX 94828758 94828849 -71821447 + CT-rich Low_complexity Low_complexity 4 92 0 4 1308 260 309 29 42 chrX 94828851 94829086 -71821210 - L1_Rod LINE L1 -4458 1422 1205 4 1308 308 399 7 14 chrX 94830890 94831044 -71819252 - MIRb SINE MIR -68 200 43 4 1308 1860 227 85 9 chrX 94831338 94831889 -71818407 - Lx9 LINE L1 -5 7639 7047 4 1308 932 269 161 40 chrX 94831889 94832506 -71817790 + Lx9 LINE L1 6951 7641 -3 4 1308 286 292 55 34 chrX 94833024 94833197 -71817099 - MIR SINE MIR -2 266 84 4 1308 291 37 0 36 chrX 94834161 94834217 -71816079 - Lx2 LINE L1 -1 6996 6949 4 1308 761 138 0 21 chrX 94835092 94835233 -71815063 - L1Md_F3 LINE L1 -1 6583 6446 4 1308 533 265 6 25 chrX 94835959 94836118 -71814178 - Lx6 LINE L1 -43 7417 7262 4 1308 188 339 0 0 chrX 94836150 94836209 -71814087 - MIR SINE MIR -54 208 150 4 1308 218 311 32 32 chrX 94836230 94836293 -71814003 - PB1D10 SINE Alu -7 110 48 4 1308 305 257 63 5 chrX 94836303 94836405 -71813891 - MIR SINE MIR -97 171 66 4 1308 3968 46 0 0 chrX 94836707 94837187 -71813109 - L1Md_F2 LINE L1 0 6582 6103 4 1308 611 127 25 0 chrX 94838273 94838391 -71811905 + L1_Mus3 LINE L1 6516 6636 -2 4 1308 455 87 0 14 chrX 94838908 94838978 -71811318 + (GA)n Simple_repeat Simple_repeat 1 69 0 4 1308 4263 109 39 39 chrX 94839210 94839961 -71810335 - RMER17A LTR ERVK 0 751 1 4 1308 290 248 83 37 chrX 94840083 94840192 -71810104 + PB1D7 SINE Alu 4 117 -3 4 1308 290 315 104 35 chrX 94841694 94841884 -71808412 - MIR SINE MIR -5 257 54 4 1308 540 0 0 0 chrX 94842223 94842283 -71808013 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 1308 327 49 0 0 chrX 94843139 94843180 -71807116 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1308 477 0 0 0 chrX 94843180 94843232 -71807064 + (GA)n Simple_repeat Simple_repeat 1 53 0 4 1308 230 352 238 12 chrX 94843433 94843597 -71806699 - MIR3 SINE MIR -8 260 60 4 1308 3107 165 26 183 chrX 94843964 94844838 -71805458 + RMER19A LTR ERVK 1 737 0 4 1308 468 0 0 0 chrX 94847835 94847887 -71802409 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 1308 457 315 7 14 chrX 94848506 94848654 -71801642 - B1_Mur3 SINE Alu -1 148 2 4 1308 227 56 56 0 chrX 94848684 94848720 -71801576 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 4 1308 23 54 0 0 chrX 94848828 94848865 -71801431 + AT_rich Low_complexity Low_complexity 1 37 0 4 1308 1425 277 108 11 chrX 94849701 94850165 -71800131 + Lx6 LINE L1 6947 7455 -5 4 1308 233 293 0 39 chrX 94850340 94850418 -71799878 + LTR33 LTR ERVL 429 503 -12 4 1308 387 0 0 0 chrX 94850901 94850944 -71799352 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1308 362 264 46 0 chrX 94850951 94851038 -71799258 - B3A SINE B2 -55 143 53 4 1308 331 303 0 48 chrX 94851552 94851656 -71798640 - MIR3 SINE MIR -41 167 69 4 1308 594 313 89 17 chrX 94852354 94852591 -71797705 + MIR SINE MIR 9 262 0 4 1308 354 45 0 0 chrX 94852806 94852850 -71797446 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1308 933 75 7 29 chrX 94853047 94853184 -71797112 + B2_Mm2 SINE B2 4 137 -58 4 1308 305 46 91 15 chrX 94854050 94854116 -71796180 + A-rich Low_complexity Low_complexity 2 72 0 4 1308 191 109 152 0 chrX 94854480 94854526 -71795770 + MIRc SINE MIR 3 55 -213 4 1308 247 261 31 0 chrX 94854884 94854949 -71795347 + MER5B DNA MER1_type 111 177 -1 4 1308 301 311 40 63 chrX 94855297 94855472 -71794824 - L1MB7 LINE L1 0 7044 6874 4 1308 341 286 173 6 chrX 94855546 94855708 -71794588 - L1MB7 LINE L1 -308 6736 6548 4 1308 268 209 146 0 chrX 94855715 94855825 -71794471 - L1MB7 LINE L1 -808 6198 6073 4 1308 302 305 0 24 chrX 94855855 94855939 -71794357 - PB1D10 SINE Alu -2 115 34 4 1308 4832 119 15 0 chrX 94856069 94856797 -71793499 - L1_Mus4 LINE L1 -6 6630 5892 4 1308 575 199 123 0 chrX 94856873 94857019 -71793277 - L1MB7 LINE L1 -1188 5818 5655 4 1308 452 299 93 3 chrX 94857031 94857397 -71792899 - L1MB7 LINE L1 -3151 3855 3457 4 1308 572 282 84 12 chrX 94857554 94858217 -71792079 - L1MB7 LINE L1 -3623 3383 2970 4 1308 39 74 0 0 chrX 94858249 94858330 -71791966 + AT_rich Low_complexity Low_complexity 1 81 0 4 1308 690 258 141 19 chrX 94858431 94858794 -71791502 - L1MA6 LINE L1 -25 6275 5869 4 1308 22 35 0 0 chrX 94858870 94858899 -71791397 + AT_rich Low_complexity Low_complexity 1 29 0 4 1308 391 240 6 209 chrX 94858968 94859126 -71791170 - RLTR42 LTR ERVK -113 126 1 4 1308 1436 215 158 54 chrX 94859127 94859575 -71790721 - RLTR42-int LTR ERVK -1 5521 5027 4 1308 22 0 0 0 chrX 94859610 94859632 -71790664 + AT_rich Low_complexity Low_complexity 1 22 0 4 1308 298 264 0 0 chrX 94859778 94859850 -71790446 + Lx9 LINE L1 7204 7275 -369 4 1308 1927 108 46 7 chrX 94860213 94860520 -71789776 - ORR1A2 LTR MaLR -8 319 1 4 1308 228 184 0 0 chrX 94860557 94860606 -71789690 + CT-rich Low_complexity Low_complexity 1 49 0 4 1308 416 331 162 0 chrX 94860613 94860749 -71789547 - RSINE1 SINE B4 -6 159 2 4 1308 4377 232 50 23 chrX 94860859 94861956 -71788340 - Lx9 LINE L1 -225 7419 6200 4 1308 270 0 0 0 chrX 94861956 94861986 -71788310 + (TC)n Simple_repeat Simple_repeat 2 31 0 4 1308 288 0 0 0 chrX 94861986 94862017 -71788279 + (TA)n Simple_repeat Simple_repeat 1 32 0 4 1308 1049 301 26 44 chrX 94862017 94862520 -71787776 - Lx9 LINE L1 -1274 6199 5697 4 1308 1413 144 18 0 chrX 94862524 94862746 -71787550 - Lx4A LINE L1 -433 6625 6400 4 1308 5697 127 81 8 chrX 94862747 94863702 -71786594 + L1_Mur2 LINE L1 4760 5783 -94 4 1308 2319 263 58 79 chrX 94863703 94864911 -71785385 - L1_Rod LINE L1 -1793 4054 2872 4 1308 652 158 24 18 chrX 94864957 94865125 -71785171 - L1_Rod LINE L1 -4118 1729 1561 4 1308 428 360 52 44 chrX 94865333 94865583 -71784713 - MER21B LTR ERV1 -313 550 299 4 1308 367 356 56 28 chrX 94865624 94865803 -71784493 - MER21B LTR ERV1 -662 201 18 4 1308 396 0 0 0 chrX 94865973 94866017 -71784279 + (GA)n Simple_repeat Simple_repeat 2 45 0 4 1308 757 228 90 19 chrX 94867005 94867098 -71783198 - L1_Mur3 LINE L1 -1404 4476 4378 4 1308 482 0 17 0 chrX 94867098 94867156 -71783140 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 4 1308 757 228 90 19 chrX 94867156 94867384 -71782912 - L1_Mur3 LINE L1 -1503 4377 4132 4 1308 2808 79 43 34 chrX 94867386 94867803 -71782493 + BGLII LTR ERVK 1 421 0 4 1308 511 100 0 0 chrX 94867806 94867876 -71782420 - tRNA-Lys-AAG tRNA tRNA 0 76 7 4 1308 1515 295 70 31 chrX 94867948 94868532 -71781764 - Lx8 LINE L1 -671 6802 6196 4 1308 438 284 7 88 chrX 94868556 94868703 -71781593 - B3A SINE B2 -6 192 58 4 1308 392 292 64 18 chrX 94868949 94869120 -71781176 - ORR1D2 LTR MaLR 0 370 192 4 1308 22 0 0 0 chrX 94869120 94869142 -71781154 + AT_rich Low_complexity Low_complexity 1 22 0 4 1308 244 102 41 0 chrX 94869222 94869271 -71781025 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 1308 3934 117 2 23 chrX 94869378 94869982 -71780314 + L1Md_F2 LINE L1 5990 6580 -2 4 1308 7699 128 15 5 chrX 94869982 94871184 -71779112 + Lx2 LINE L1 5782 6995 -2 4 1308 2454 257 103 28 chrX 94871208 94872309 -71777987 + L1_Rod LINE L1 2058 3240 -2607 4 1308 585 236 133 25 chrX 94872508 94872758 -71777538 - RLTR10A LTR ERVK 0 411 114 4 1308 1784 273 41 38 chrX 94872786 94874351 -71775945 - RLTR45-int LTR ERVK -204 7040 4193 4 1308 512 321 48 50 chrX 94874542 94875102 -71775194 - RLTR45-int LTR ERVK -3243 4338 3544 4 1308 1269 296 28 10 chrX 94875191 94875686 -71774610 - RLTR45-int LTR ERVK -3961 3620 3117 4 1308 256 307 10 10 chrX 94875881 94875983 -71774313 + CT-rich Low_complexity Low_complexity 2 103 0 4 1308 540 235 129 21 chrX 94876147 94876397 -71773899 - RLTR10A LTR ERVK 0 411 114 4 1308 1386 143 64 104 chrX 94876727 94876895 -71773401 - RLTR13D6 LTR ERVK -73 829 609 4 1308 234 0 0 0 chrX 94876895 94876921 -71773375 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 4 1308 1386 124 56 122 chrX 94876921 94877106 -71773190 - RLTR13D6 LTR ERVK -213 689 532 4 1308 758 229 8 0 chrX 94877494 94877625 -71772671 - ETnERV2-int LTR ERVK -205 7201 7070 4 1308 3842 85 8 6 chrX 94877626 94878160 -71772136 - RLTR13D6 LTR ERVK -367 535 1 4 1308 1437 312 52 24 chrX 94878533 94879153 -71771143 + RMER15-int LTR ERVL 372 1008 -3991 4 1308 621 367 93 0 chrX 94879166 94879466 -71770830 + RMER15-int LTR ERVL 1066 1393 -3606 4 1308 25 31 0 0 chrX 94879605 94879637 -71770659 + AT_rich Low_complexity Low_complexity 1 32 0 5 1308 311 261 29 43 chrX 94879644 94879784 -71770512 + L1M2 LINE L1 3591 3728 -2415 5 1308 5935 196 35 14 chrX 94879779 94881086 -71769210 + Lx5 LINE L1 4872 6218 -832 5 1308 2980 86 5 9 chrX 94881086 94881509 -71768787 + BGLII LTR ERVK 1 421 0 5 1308 5935 232 34 24 chrX 94881509 94882220 -71768076 + Lx5 LINE L1 6219 6934 -116 5 1308 865 337 74 40 chrX 94882224 94882300 -71767996 + MTE-int LTR MaLR 459 531 -1049 5 1308 258 32 0 0 chrX 94882300 94882331 -71767965 + (TTAA)n Simple_repeat Simple_repeat 1 31 0 5 1308 865 337 74 40 chrX 94882331 94882702 -71767594 + MTE-int LTR MaLR 532 921 -659 5 1308 515 65 42 32 chrX 94883009 94883104 -71767192 + L1_Mus2 LINE L1 6471 6566 0 5 1308 8505 5 0 0 chrX 94883106 94884062 -71766234 + L1Md_A LINE L1 4631 5586 -297 5 1308 9041 1 0 0 chrX 94884062 94885058 -71765238 + L1Md_A LINE L1 5587 6582 0 5 1308 906 323 48 30 chrX 94885112 94885889 -71764407 + L1M2 LINE L1 4647 5434 -446 5 1308 2632 241 67 22 chrX 94885882 94886604 -71763692 + Lx2B LINE L1 6244 6997 -3 5 1308 769 299 152 72 chrX 94886722 94887071 -71763225 - MTEa LTR MaLR -2 377 1 5 1308 215 296 0 0 chrX 94887502 94887556 -71762740 - L2a LINE L2 -31 3395 3342 5 1308 3006 39 0 0 chrX 94887666 94888029 -71762267 - L1Md_F2 LINE L1 -12 6570 6208 5 1308 474 316 0 34 chrX 94888039 94888216 -71762080 - Lx8 LINE L1 -1004 6469 6299 5 1308 340 271 59 0 chrX 94888224 94888309 -71761987 + Lx8 LINE L1 6477 6566 -907 5 1308 831 375 48 8 chrX 94888379 94888863 -71761433 + Lx8 LINE L1 6805 7307 -166 5 1308 1827 140 110 6 chrX 94888997 94889314 -71760982 + Lx4B LINE L1 6699 7048 -10 5 1308 23 33 0 0 chrX 94889314 94889344 -71760952 + AT_rich Low_complexity Low_complexity 1 30 0 5 1308 615 207 0 0 chrX 94889748 94889883 -71760413 + (TA)n Simple_repeat Simple_repeat 1 135 0 5 1308 423 0 0 0 chrX 94890930 94890977 -71759319 + (CATA)n Simple_repeat Simple_repeat 1 47 0 5 1308 1299 201 83 9 chrX 94890984 94891310 -71758986 - Lx9 LINE L1 -4 7640 7291 5 1308 3010 125 2 0 chrX 94891625 94892058 -71758238 - Lx3B LINE L1 -353 6620 6187 5 1308 308 269 30 0 chrX 94892142 94892209 -71758087 + RSINE1 SINE B4 61 129 -36 5 1308 26 50 0 0 chrX 94892259 94892299 -71757997 + AT_rich Low_complexity Low_complexity 1 40 0 5 1308 205 224 51 17 chrX 94892322 94892381 -71757915 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 5 1308 189 187 26 13 chrX 94892397 94892473 -71757823 + (TA)n Simple_repeat Simple_repeat 2 78 0 5 1308 503 258 201 6 chrX 94892551 94892730 -71757566 + B3 SINE B2 3 216 0 5 1308 1887 187 63 3 chrX 94893345 94893709 -71756587 - ORR1B1 LTR MaLR -8 386 1 5 1308 235 313 11 46 chrX 94894225 94894312 -71755984 + MIRb SINE MIR 119 202 -66 5 1308 5512 155 4 9 chrX 94894461 94894504 -71755792 - L1_Mur2 LINE L1 -620 5257 5221 5 1308 2158 143 0 3 chrX 94894504 94894847 -71755449 - ORR1A1 LTR MaLR -2 344 3 5 1308 5512 155 4 9 chrX 94894847 94895753 -71754543 - L1_Mur2 LINE L1 -657 5220 4313 5 163 2412 233 63 33 chrX 94895740 94896379 -71753917 + Lx2B LINE L1 6335 6992 -8 5 1309 732 263 147 70 chrX 94896790 94897191 -71753105 + MT2A LTR ERVL 1 432 -101 5 1309 432 0 0 0 chrX 94897196 94897244 -71753052 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1309 372 22 0 0 chrX 94897244 94897288 -71753008 + (CAGAGA)n Simple_repeat Simple_repeat 4 48 0 5 1309 467 155 0 0 chrX 94897374 94897445 -71752851 + MT2A LTR ERVL 1 71 -462 5 1309 648 64 0 0 chrX 94897445 94897539 -71752757 + (CA)n Simple_repeat Simple_repeat 1 94 0 5 1309 278 284 101 74 chrX 94897615 94897873 -71752423 - L1MD1 LINE L1 -315 5927 5663 5 1309 248 262 30 15 chrX 94897893 94897959 -71752337 - PB1D10 SINE Alu -45 72 6 5 1309 22 35 0 0 chrX 94898099 94898128 -71752168 + AT_rich Low_complexity Low_complexity 1 29 0 5 1309 220 372 10 0 chrX 94898515 94898617 -71751679 - MIRc SINE MIR -110 158 56 5 1309 288 346 45 50 chrX 94898702 94898900 -71751396 + MIR SINE MIR 4 200 -62 5 1309 23 33 0 0 chrX 94898941 94898971 -71751325 + AT_rich Low_complexity Low_complexity 1 30 0 5 1309 836 109 51 6 chrX 94899074 94899231 -71751065 + Lx3A LINE L1 6773 6936 -45 5 1309 212 180 31 47 chrX 94899338 94899402 -71750894 + (TATATG)n Simple_repeat Simple_repeat 1 63 0 5 1309 204 158 0 0 chrX 94899466 94899504 -71750792 + A-rich Low_complexity Low_complexity 1 38 0 5 1309 25 0 0 0 chrX 94899707 94899732 -71750564 + AT_rich Low_complexity Low_complexity 1 25 0 5 1309 575 316 128 61 chrX 94899862 94900401 -71749895 - Lx8 LINE L1 -8 7465 6891 5 1309 267 169 31 0 chrX 94901331 94901396 -71748900 + (TA)n Simple_repeat Simple_repeat 2 68 0 5 1309 3823 137 27 21 chrX 94901953 94902618 -71747678 - Lx LINE L1 -13 6641 5973 5 1309 2423 189 39 154 chrX 94902645 94903836 -71746460 - L1Md_F LINE L1 -2538 1279 164 5 1309 4149 226 104 74 chrX 94903846 94905425 -71744871 + L1_Mur3 LINE L1 1131 2808 -3072 5 1309 557 0 0 0 chrX 94905425 94905494 -71744802 + L1Md_A LINE L1 6514 6582 0 5 1309 4149 232 118 84 chrX 94905494 94906285 -71744011 + L1_Mur3 LINE L1 2809 3614 -2266 5 1309 225 0 0 0 chrX 94906285 94906310 -71743986 + (CAA)n Simple_repeat Simple_repeat 2 26 0 5 1309 4149 232 118 84 chrX 94906310 94906375 -71743921 + L1_Mur3 LINE L1 3615 3700 -2180 5 1309 1400 124 84 19 chrX 94906375 94906637 -71743659 + Lx LINE L1 6370 6648 -6 5 1309 4149 232 118 84 chrX 94906637 94907111 -71743185 + L1_Mur3 LINE L1 3701 4142 -1738 5 1309 518 269 82 24 chrX 94907086 94907292 -71743004 - L1_Mur3 LINE L1 -2245 3635 3418 5 1309 303 93 0 0 chrX 94907475 94907518 -71742778 + (TTG)n Simple_repeat Simple_repeat 2 44 0 5 1309 419 314 87 48 chrX 94907672 94908007 -71742289 + Lx9 LINE L1 5751 6098 -1546 5 1309 1127 291 162 24 chrX 94908049 94908586 -71741710 + Lx9 LINE L1 6359 6969 -675 5 1309 617 259 15 0 chrX 94908649 94908780 -71741516 - B1_Mur3 SINE Alu -15 134 2 5 1309 448 288 91 91 chrX 94908780 94908990 -71741306 + Lx9 LINE L1 6984 7193 -451 5 1309 1388 259 70 77 chrX 94909051 94909177 -71741119 - L1_Mur3 LINE L1 -2454 3426 3296 5 1309 237 86 0 0 chrX 94909177 94909212 -71741084 - tRNA-Cys-TGY tRNA tRNA -40 35 1 5 1309 1388 259 70 77 chrX 94909212 94909624 -71740672 - L1_Mur3 LINE L1 -2454 3295 2864 5 1309 3321 65 7 2 chrX 94909624 94910056 -71740240 - L1Md_F3 LINE L1 -1 6583 6150 5 1309 1388 259 70 77 chrX 94910056 94910317 -71739979 - L1_Mur3 LINE L1 -3017 2863 2599 5 1309 3340 28 8 0 chrX 94910317 94910710 -71739586 - MTA_Mm LTR MaLR 0 396 1 5 1309 6754 89 42 52 chrX 94910710 94911590 -71738706 - MTA_Mm-int LTR MaLR 0 1098 227 5 1309 3297 45 13 144 chrX 94911590 94912137 -71738159 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1309 6754 89 42 52 chrX 94912137 94912365 -71737931 - MTA_Mm-int LTR MaLR -872 226 1 5 1309 3189 41 8 2 chrX 94912365 94912758 -71737538 - MTA_Mm LTR MaLR 0 396 2 5 1309 454 291 30 5 chrX 94912825 94913022 -71737274 - L1_Mur3 LINE L1 -3302 2578 2377 5 1309 778 311 14 9 chrX 94913019 94913240 -71737056 - Lx9 LINE L1 -1011 6633 6412 5 1309 3194 171 18 48 chrX 94913327 94914520 -71735776 + L1VL4 LINE L1 174 1322 -2237 5 1309 397 266 18 159 chrX 94914518 94914688 -71735608 + L1VL1 LINE L1 212 357 -6065 5 1309 334 288 168 11 chrX 94914729 94914908 -71735388 + L1_Mus3 LINE L1 609 815 -5801 5 1309 600 221 16 0 chrX 94914905 94915027 -71735269 + L1_Mus3 LINE L1 725 848 -5768 5 1309 16845 142 16 9 chrX 94915028 94918442 -71731854 + L1_Mus3 LINE L1 2940 6375 -263 5 1309 747 158 0 26 chrX 94918438 94918594 -71731702 + L1_Mus3 LINE L1 6483 6634 -2 5 1309 774 302 25 0 chrX 94918587 94918941 -71731355 - L1_Mur3 LINE L1 -2277 3603 3241 5 1309 605 299 52 10 chrX 94918928 94919330 -71730966 - L1M2 LINE L1 -2985 3158 2740 5 1309 250 130 0 55 chrX 94919376 94919449 -71730847 + T-rich Low_complexity Low_complexity 2 70 0 5 1309 329 257 73 0 chrX 94920904 94921013 -71729283 + L1_Rod LINE L1 2316 2432 -3415 5 1309 271 319 38 6 chrX 94920997 94921180 -71729116 + L1M2 LINE L1 2823 3011 -3132 5 1309 6418 230 72 33 chrX 94921237 94923244 -71727052 - Lx6 LINE L1 -5 7455 5356 5 1309 35379 35 1 0 chrX 94923245 94929086 -71721210 + L1Md_T LINE L1 1 5589 -297 5 1309 8817 10 0 5 chrX 94929086 94930113 -71720183 + L1Md_T LINE L1 5590 6585 0 5 1309 9904 196 60 157 chrX 94930113 94931253 -71719043 - Lx6 LINE L1 -509 5371 4191 5 1309 453 66 0 0 chrX 94931253 94931314 -71718982 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1309 9904 196 60 157 chrX 94931314 94933879 -71716417 - Lx6 LINE L1 -1690 4190 2059 5 1309 502 82 24 0 chrX 94933879 94933964 -71716332 + (TG)n Simple_repeat Simple_repeat 2 88 0 5 1309 9904 196 60 157 chrX 94933964 94934116 -71716180 - Lx6 LINE L1 -3822 2058 1888 5 1309 1888 315 22 60 chrX 94934108 94934915 -71715381 + L1_Mur3 LINE L1 99 875 -6853 5 1309 1221 173 13 0 chrX 94934914 94935151 -71715145 + L1_Mur3 LINE L1 1675 1914 -3966 5 1309 2302 244 29 42 chrX 94935231 94936067 -71714229 + L1_Mur3 LINE L1 2765 3589 -2291 5 1309 321 26 0 0 chrX 94936094 94936132 -71714164 + (TTGG)n Simple_repeat Simple_repeat 1 38 0 5 1309 1109 110 0 0 chrX 94936134 94936289 -71714007 - B2_Mm2 SINE B2 -39 156 2 5 1309 7682 97 6 2 chrX 94936361 94937726 -71712570 - L1_Mus3 LINE L1 -7 6631 5264 5 1309 2275 160 3 3 chrX 94937728 94938117 -71712179 + L1_Mus3 LINE L1 4883 5271 -612 5 1309 2726 227 43 8 chrX 94938119 94938847 -71711449 + L1_Mur3 LINE L1 3660 4412 -1468 5 1309 25 0 0 0 chrX 94939111 94939136 -71711160 + AT_rich Low_complexity Low_complexity 1 25 0 5 1309 185 387 128 8 chrX 94941082 94941207 -71709089 + L2 LINE L2 2714 2853 -566 5 1309 3809 36 0 0 chrX 94941215 94941665 -71708631 + L1Md_T LINE L1 6133 6582 0 5 1309 225 0 0 0 chrX 94941848 94941873 -71708423 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 5 1309 351 0 0 0 chrX 94941874 94941913 -71708383 + (TC)n Simple_repeat Simple_repeat 2 40 0 5 1309 222 118 0 0 chrX 94941960 94941994 -71708302 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 5 1309 3207 163 15 2 chrX 94942566 94943094 -71707202 - Lx3B LINE L1 -26 6947 6413 5 1309 276 219 0 0 chrX 94943966 94944048 -71706248 + (TG)n Simple_repeat Simple_repeat 1 82 0 5 1309 315 271 115 172 chrX 94945236 94945428 -71704868 + B3A SINE B2 2 182 -16 5 1309 996 47 0 8 chrX 94945428 94945557 -71704739 + BGLII LTR ERVK 294 421 0 5 1309 1910 315 20 33 chrX 94945565 94946296 -71704000 + Lx7 LINE L1 6481 7202 -494 5 1309 200 186 0 17 chrX 94946329 94946389 -71703907 + (TAG)n Simple_repeat Simple_repeat 1 59 0 5 1309 306 339 29 12 chrX 94946468 94946641 -71703655 - MER33 DNA MER1_type -147 177 2 5 1309 997 220 0 0 chrX 94946818 94947009 -71703287 - Lx6 LINE L1 -12 7448 7258 5 1309 669 296 14 5 chrX 94947081 94947298 -71702998 + Tigger5 DNA MER2_type 2168 2386 -20 5 1309 408 323 82 0 chrX 94947567 94947725 -71702571 - ERVL-E-int LTR ERVL -683 4984 4814 5 1309 894 269 121 12 chrX 94948029 94948285 -71702011 - Lx6 LINE L1 -392 7068 6785 5 1309 1994 235 7 10 chrX 94948287 94948699 -71701597 + MTC LTR MaLR 8 418 -3 5 1309 357 200 73 83 chrX 94948699 94948808 -71701488 - Lx6 LINE L1 -668 6792 6685 5 1309 555 16 0 0 chrX 94948989 94949053 -71701243 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 1309 2003 339 26 16 chrX 94949053 94949929 -71700367 - Lx8 LINE L1 -260 7213 6329 5 1309 890 257 72 42 chrX 94949934 94950381 -71699915 - L1_Rod LINE L1 -1186 4661 4202 5 1309 488 225 8 0 chrX 94950390 94950510 -71699786 - L1_Mur3 LINE L1 -605 5275 5155 5 1309 4909 174 49 24 chrX 94950508 94952082 -71698214 + Lx2 LINE L1 5124 6648 -6 5 1309 2537 158 67 11 chrX 94952082 94952557 -71697739 + Lx2 LINE L1 6489 6990 -7 5 1309 294 335 57 46 chrX 94952607 94952782 -71697514 + L1M3e LINE L1 94 270 -6760 5 1309 3475 34 68 31 chrX 94953157 94953615 -71696681 - IAPLTR2_Mm LTR ERVK 0 475 1 6 1309 6368 54 13 18 chrX 94953617 94954450 -71695846 - IAPEz-int LTR ERVK -2 6479 5651 6 1309 2578 88 0 3 chrX 94954443 94954786 -71695510 - IAPEz-int LTR ERVK -4781 1700 1359 6 1309 3476 66 1 16 chrX 94954786 94955364 -71694932 - IAPEz-int LTR ERVK -5819 662 168 6 1309 237 250 0 0 chrX 94955364 94955408 -71694888 - RLTR27 LTR ERVK -34 275 232 6 1309 1057 139 0 70 chrX 94955417 94955618 -71694678 - IAPEz-int LTR ERVK -6286 195 9 6 1309 3018 37 87 0 chrX 94955619 94955997 -71694299 - IAPLTR2_Mm LTR ERVK 0 411 1 6 1309 185 100 0 48 chrX 94956345 94956387 -71693909 + (CAGAGA)n Simple_repeat Simple_repeat 3 42 0 6 1309 233 391 0 0 chrX 94956500 94956592 -71693704 - B4 SINE B4 -95 197 106 6 1309 2238 251 31 18 chrX 94956596 94956916 -71693380 - Lx7 LINE L1 -501 7195 6868 6 1309 401 0 20 0 chrX 94956916 94956965 -71693331 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1309 2238 251 31 18 chrX 94956965 94957193 -71693103 - Lx7 LINE L1 -829 6867 6640 6 1309 2656 231 53 77 chrX 94957196 94958125 -71692171 - Lx7 LINE L1 -1525 6171 5260 6 1309 890 158 7 27 chrX 94958125 94958275 -71692021 - B1_Mus1 SINE Alu 0 148 2 6 1309 2656 222 44 96 chrX 94958275 94958533 -71691763 - Lx7 LINE L1 -621 5259 5022 6 1309 459 345 22 74 chrX 94958554 94958823 -71691473 - RMER13A LTR ERVK -593 267 13 6 1309 596 273 67 47 chrX 94958830 94959233 -71691063 - Lx7 LINE L1 -889 4991 4581 6 1309 4040 250 51 48 chrX 94959232 94959773 -71690523 - Lx7 LINE L1 -146 7550 6993 6 1309 4026 57 6 0 chrX 94959773 94960279 -71690017 + L1_Mus2 LINE L1 6057 6565 -1 6 1309 4040 250 51 48 chrX 94960279 94960854 -71689442 - Lx7 LINE L1 -704 6992 6431 6 1309 246 160 0 0 chrX 94960854 94960904 -71689392 + T-rich Low_complexity Low_complexity 1 50 0 6 1309 1930 30 0 4 chrX 94960915 94961151 -71689145 - L1Md_F3 LINE L1 -14 6570 6336 6 1309 917 208 121 17 chrX 94961192 94961432 -71688864 - Lx7 LINE L1 -1260 6436 6172 6 1309 270 189 19 0 chrX 94961428 94961481 -71688815 + Lx7 LINE L1 6249 6302 -1394 6 1309 640 291 112 11 chrX 94961477 94961755 -71688541 + L1MB3 LINE L1 4880 5185 -958 6 1309 236 265 103 51 chrX 94962004 94962179 -71688117 - L1M5 LINE L1 -457 5722 5539 6 1309 251 279 131 22 chrX 94962853 94963121 -71687175 - L1MD LINE L1 -865 5281 4985 6 1309 1066 306 20 20 chrX 94963148 94963887 -71686409 + Lx8 LINE L1 5221 5961 -1512 6 1309 1010 294 81 56 chrX 94964094 94964308 -71685988 + Lx8 LINE L1 6258 6491 -982 6 1309 1851 77 23 4 chrX 94964308 94964569 -71685727 + L1_Mus2 LINE L1 6301 6566 0 6 1309 1010 294 81 56 chrX 94964569 94964800 -71685496 + Lx8 LINE L1 6492 6714 -759 6 1309 4694 68 5 7 chrX 94964980 94965597 -71684699 - L1Md_F2 LINE L1 -13 6569 5954 6 1309 254 268 0 0 chrX 94965616 94965687 -71684609 + L1MB3 LINE L1 5403 5473 -698 6 1309 464 283 55 17 chrX 94965809 94966046 -71684250 + L1MB3 LINE L1 5914 6159 -24 6 1309 278 321 24 0 chrX 94967392 94967476 -71682820 + MIR3 SINE MIR 102 187 -21 6 1309 369 360 87 20 chrX 94968179 94968536 -71681760 - Lx8 LINE L1 -219 7254 6874 6 1309 3424 126 2 13 chrX 94968626 94969150 -71681146 + Lx3B LINE L1 6451 6968 -5 6 1309 303 282 79 16 chrX 94969197 94969323 -71680973 + Lx8 LINE L1 7336 7469 -4 6 1309 12974 147 30 19 chrX 94969531 94970882 -71679414 - Lx2 LINE L1 0 6997 5626 6 1309 3994 35 12 6 chrX 94970882 94971398 -71678898 - L1Md_F2 LINE L1 0 6582 6079 6 1309 12974 229 59 40 chrX 94971398 94975426 -71674870 - Lx2 LINE L1 -258 5628 1520 6 1309 13747 123 20 25 chrX 94975428 94978333 -71671963 - L1VL4 LINE L1 -346 3471 573 6 1309 439 323 12 0 chrX 94979042 94979209 -71671087 - L1_Mur3 LINE L1 -3561 2319 2151 6 1309 4048 117 55 6 chrX 94979210 94979831 -71670465 - L1_Mus4 LINE L1 -396 6240 5590 6 1309 363 290 63 16 chrX 94979852 94979978 -71670318 + Lx9 LINE L1 7120 7251 -393 6 1309 1002 295 61 39 chrX 94979979 94980388 -71669908 - Lx9 LINE L1 -521 7123 6706 6 1309 1000 154 25 10 chrX 94980546 94980743 -71669553 - Lx2 LINE L1 0 6997 6798 6 1309 503 217 0 0 chrX 94980743 94980835 -71669461 - B1_Mus2 SINE Alu -55 92 1 6 1309 293 312 37 33 chrX 94980873 94981088 -71669208 - L1M2 LINE L1 -1548 4595 4380 6 1309 3191 192 38 19 chrX 94981414 94982039 -71668257 + Lx2B LINE L1 6364 7000 0 6 1309 3247 18 31 39 chrX 94982122 94982536 -71667760 - IAPLTR2a LTR ERVK 0 411 1 6 1309 5652 132 32 19 chrX 94982559 94983501 -71666795 + RMER17B LTR ERVK 1 954 -4 6 1309 3153 202 133 86 chrX 94983639 94984499 -71665797 + RMER19B LTR ERVK 3 902 0 6 1309 699 12 0 0 chrX 94984847 94984927 -71665369 + (TC)n Simple_repeat Simple_repeat 1 80 0 6 1309 378 0 0 0 chrX 94986106 94986148 -71664148 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 6 1309 450 0 0 0 chrX 94986716 94986766 -71663530 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1309 261 271 43 78 chrX 94986773 94986889 -71663407 + MT2A LTR ERVL 127 238 -295 6 1309 1803 47 26 4 chrX 94987053 94987286 -71663010 - L1Md_A LINE L1 0 6582 6345 6 1309 1040 215 31 14 chrX 94987309 94987531 -71662765 + URR1A DNA MER1_type 1 226 0 6 1309 4161 126 3 11 chrX 94988620 94989263 -71661033 - L1_Mus3 LINE L1 -3 6635 5998 6 1309 5761 32 4 0 chrX 94989263 94989948 -71660348 - L1Md_T LINE L1 0 6582 5895 6 1309 708 12 0 0 chrX 94990044 94990125 -71660171 + (TC)n Simple_repeat Simple_repeat 1 81 0 6 1309 417 20 0 0 chrX 94990135 94990185 -71660111 + (GA)n Simple_repeat Simple_repeat 2 51 0 6 1309 192 317 17 0 chrX 94990474 94990534 -71659762 - MIRc SINE MIR -189 79 19 6 1309 23 54 0 0 chrX 94990945 94990982 -71659314 + AT_rich Low_complexity Low_complexity 1 37 0 6 1309 721 169 25 6 chrX 94992320 94992481 -71657815 + Lx2A1 LINE L1 6842 7005 -3 6 1309 256 61 82 0 chrX 94992497 94992546 -71657750 + (CAAAA)n Simple_repeat Simple_repeat 3 55 0 6 1309 1447 268 65 3 chrX 94992549 94992934 -71657362 - MTD LTR MaLR 0 419 11 6 1309 371 241 26 53 chrX 94992940 94993054 -71657242 - MTD-int LTR MaLR 0 1258 1148 6 1309 941 281 89 44 chrX 94993070 94993598 -71656698 - Lx9 LINE L1 -3 7641 7090 6 1309 294 95 0 0 chrX 94993598 94993640 -71656656 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1309 1402 348 11 47 chrX 94993646 94994270 -71656026 - Lx9 LINE L1 -688 6956 6355 6 1309 600 62 0 0 chrX 94994285 94994366 -71655930 + (GA)n Simple_repeat Simple_repeat 2 82 0 6 1309 1475 196 139 14 chrX 94994554 94994906 -71655390 - MTC LTR MaLR 0 421 26 6 1309 1044 80 0 0 chrX 94994906 94995044 -71655252 + B1_Mus1 SINE Alu 11 148 0 6 1309 740 325 29 17 chrX 94995113 94995354 -71654942 - MTE2a LTR MaLR -68 311 68 6 1309 23027 90 3 12 chrX 94995625 94998873 -71651423 - L1Md_F2 LINE L1 -12 6570 3340 6 1309 631 33 0 22 chrX 94998873 94998965 -71651331 + (TTTTG)n Simple_repeat Simple_repeat 1 90 0 6 1309 23027 91 4 14 chrX 94998965 94999729 -71650567 - L1Md_F2 LINE L1 -2544 3339 2599 6 1309 2035 48 0 0 chrX 94999730 95000000 -71650296 - L1Md_F2 LINE L1 -4133 1750 1481 6 1309 4581 163 11 37 chrX 95000000 95001141 -71649155 - L1Md_F LINE L1 -4403 1480 361 1 1309 1284 235 43 35 chrX 95001168 95001539 -71648757 - ORR1D1 LTR MaLR 0 374 1 2 1309 277 287 0 82 chrX 95001729 95001831 -71648465 - MTC-int LTR MaLR -279 979 887 3 1309 822 331 124 11 chrX 95001831 95002209 -71648087 + MTC LTR MaLR 1 421 0 4 1309 1430 348 87 29 chrX 95002231 95002657 -71647639 + Lx7 LINE L1 5594 6046 -1650 5 1309 189 0 0 0 chrX 95002657 95002678 -71647618 + (AATAG)n Simple_repeat Simple_repeat 2 22 0 6 1309 1430 348 87 29 chrX 95002678 95003799 -71646497 + Lx7 LINE L1 6047 7229 -467 5 1309 365 319 50 9 chrX 95004152 95004370 -71645926 + L1MA4A LINE L1 5629 5855 -448 7 1309 7596 73 2 2 chrX 95004626 95005861 -71644435 + L1_Mus2 LINE L1 5331 6566 0 8 1309 594 250 0 7 chrX 95005970 95006110 -71644186 + B1_Mur1 SINE Alu 3 137 -13 9 1309 751 186 16 0 chrX 95006110 95006239 -71644057 + B1_Mus2 SINE Alu 9 139 -8 1 1309 28 71 0 0 chrX 95006790 95006846 -71643450 + AT_rich Low_complexity Low_complexity 1 56 0 1 1309 369 0 0 0 chrX 95007180 95007221 -71643075 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1309 781 329 121 17 chrX 95007221 95008034 -71642262 - L1_Mur3 LINE L1 -137 5743 4847 1 1309 36 0 0 0 chrX 95008419 95008455 -71641841 + AT_rich Low_complexity Low_complexity 1 36 0 1 1309 707 260 6 17 chrX 95008456 95008636 -71641660 - Lx6 LINE L1 -189 7271 7094 1 1309 1066 238 60 8 chrX 95008618 95008982 -71641314 + L1_Rod LINE L1 1544 1926 -3921 1 1309 12605 63 0 1 chrX 95008980 95010601 -71639695 + L1_Mm LINE L1 3657 5276 -607 1 1309 1548 54 5 5 chrX 95010601 95010806 -71639490 + L1Md_F2 LINE L1 6370 6574 -8 1 1309 180 214 0 0 chrX 95010915 95010971 -71639325 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1309 1698 285 52 47 chrX 95010994 95011823 -71638473 + L1_Rod LINE L1 2368 3200 -2647 1 1309 274 242 28 66 chrX 95011868 95011974 -71638322 + L1_Rod LINE L1 4173 4274 -1573 1 1309 202 121 0 29 chrX 95012019 95012053 -71638243 + T-rich Low_complexity Low_complexity 1 33 0 2 1309 972 247 57 31 chrX 95012053 95012517 -71637779 - L1_Rod LINE L1 -1269 4874 4443 2 1309 274 295 20 139 chrX 95012545 95012758 -71637538 + ORR1A3-int LTR MaLR 926 1297 -666 2 1309 23 0 0 0 chrX 95012941 95012964 -71637332 + AT_rich Low_complexity Low_complexity 1 23 0 2 1309 404 305 100 1 chrX 95013008 95013177 -71637119 - L1_Mur3 LINE L1 -1916 4230 3974 1 1309 333 0 0 0 chrX 95013177 95013214 -71637082 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1309 628 319 78 6 chrX 95013214 95013542 -71636754 - L1_Mur3 LINE L1 -1904 3973 3621 1 1309 1601 303 102 45 chrX 95013545 95014603 -71635693 + Lx9 LINE L1 6526 7643 -1 2 1309 444 275 101 10 chrX 95014615 95014918 -71635378 - L1_Mur3 LINE L1 -2274 3612 3269 1 1309 235 196 0 0 chrX 95014962 95015008 -71635288 - L1_Mur3 LINE L1 -2555 3325 3280 1 1309 291 267 210 4 chrX 95015020 95015268 -71635028 - L1M2 LINE L1 -2980 3163 2865 2 1309 776 268 28 35 chrX 95015304 95015590 -71634706 - Lx9 LINE L1 -1618 6026 5743 2 1309 1641 277 86 64 chrX 95015591 95016690 -71633606 - L1_Mur3 LINE L1 -2161 3719 2596 2 1309 686 236 41 20 chrX 95016692 95016887 -71633409 - L1_Mur3 LINE L1 -3439 2441 2243 2 1309 631 201 276 10 chrX 95016887 95017209 -71633087 - MTD LTR MaLR -16 403 14 2 1309 624 205 70 29 chrX 95017264 95017435 -71632861 - MTD-int LTR MaLR -159 1099 922 3 1309 306 0 0 0 chrX 95017442 95017476 -71632820 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 1309 1436 71 15 0 chrX 95017692 95017890 -71632406 + L1_Mm LINE L1 5264 5464 -419 3 1309 1992 272 57 74 chrX 95017924 95018925 -71631371 - MTD-int LTR MaLR -375 883 1 3 1309 1120 301 96 25 chrX 95018931 95019285 -71631011 - MTD LTR MaLR -11 408 30 3 1309 2808 221 42 11 chrX 95019285 95019931 -71630365 - Lx6 LINE L1 -611 6849 6184 3 1309 517 113 41 0 chrX 95019933 95020030 -71630266 + Lx7 LINE L1 1528 1628 -4252 3 1309 793 129 47 20 chrX 95020021 95020171 -71630125 + Lx7 LINE L1 2643 2796 -3084 3 1309 4743 195 67 28 chrX 95020159 95021185 -71629111 + Lx7 LINE L1 4673 5746 -134 3 1309 288 0 0 0 chrX 95021185 95021217 -71629079 + (TAGA)n Simple_repeat Simple_repeat 2 33 0 3 1309 360 0 0 0 chrX 95021217 95021257 -71629039 + (ATATG)n Simple_repeat Simple_repeat 3 42 0 3 1309 4743 232 70 19 chrX 95021257 95021645 -71628651 + Lx7 LINE L1 5741 6151 -1545 3 1309 25 31 0 0 chrX 95023130 95023162 -71627134 + AT_rich Low_complexity Low_complexity 1 32 0 3 1309 610 281 50 40 chrX 95025092 95025368 -71624928 - L1M2 LINE L1 -152 5728 5464 3 1309 279 353 35 0 chrX 95025419 95025535 -71624761 - ID_B1 SINE B4 -6 218 99 3 1309 769 319 37 16 chrX 95025539 95026070 -71624226 - L1M2 LINE L1 -442 5405 4868 3 163 5145 175 51 6 chrX 95026103 95027331 -71622965 - Lx2B LINE L1 0 7058 5778 4 1310 6601 122 40 32 chrX 95027321 95028948 -71621348 - L1_Mus1 LINE L1 -1 6566 4924 4 1310 35410 47 0 3 chrX 95028949 95034442 -71615854 + L1Md_T LINE L1 18 5589 -297 4 1310 8310 36 1 0 chrX 95034442 95035437 -71614859 + L1Md_T LINE L1 5590 6585 0 4 1310 13834 189 19 96 chrX 95035452 95037466 -71612830 - L1VL1 LINE L1 -947 4933 2924 4 1310 2705 75 0 21 chrX 95037466 95037848 -71612448 - RLTR9D LTR ERVK -29 374 1 4 1310 13834 189 19 96 chrX 95037848 95040366 -71609930 - L1VL1 LINE L1 -947 2923 410 4 1310 610 325 71 24 chrX 95040807 95041185 -71609111 - L1MDa LINE L1 -5347 1286 891 4 1310 760 322 12 12 chrX 95041621 95041869 -71608427 - Lx8 LINE L1 -395 7078 6831 4 1310 3036 181 20 65 chrX 95041938 95043205 -71607091 + L1VL4 LINE L1 148 1344 -2215 4 1310 15374 118 13 4 chrX 95043189 95044172 -71606124 + L1_Mus2 LINE L1 3476 4450 -1433 4 1310 3331 3 0 0 chrX 95044172 95044544 -71605752 + L1Md_T LINE L1 6211 6582 0 4 1310 15374 118 13 4 chrX 95044544 95045314 -71604982 + L1_Mus2 LINE L1 4451 5226 -657 4 1310 360 0 0 0 chrX 95045314 95045354 -71604942 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 1310 15374 96 5 5 chrX 95045354 95046672 -71603624 + L1_Mus2 LINE L1 5227 6566 0 4 1310 194 91 0 29 chrX 95046684 95046718 -71603578 + (TATG)n Simple_repeat Simple_repeat 4 36 0 5 1310 283 282 71 71 chrX 95047123 95047291 -71603005 - MIRc SINE MIR -15 253 86 5 1310 1025 223 13 18 chrX 95047736 95047960 -71602336 + URR1B DNA MER1_type 3 225 0 5 1310 21 0 0 0 chrX 95051125 95051146 -71599150 + AT_rich Low_complexity Low_complexity 1 21 0 5 1310 438 285 0 30 chrX 95051410 95051544 -71598752 - Lx8 LINE L1 -960 6513 6384 5 1310 524 356 9 44 chrX 95051720 95051949 -71598347 - MLT1C LTR MaLR -26 441 221 5 1310 3991 262 48 68 chrX 95052052 95053790 -71596506 - L1_Rod LINE L1 -1965 3882 2180 5 1310 846 166 20 16 chrX 95053791 95053975 -71596321 + ORR1A4 LTR MaLR 125 307 -67 5 1310 8963 123 15 8 chrX 95053977 95055350 -71594946 + Lx2 LINE L1 5614 6995 -2 5 1310 2355 109 12 0 chrX 95055388 95055719 -71594577 + Lx2 LINE L1 6392 6726 -271 6 1310 3887 133 34 23 chrX 95055840 95055998 -71594298 - L1_Mur2 LINE L1 -3656 2221 2064 6 1310 495 0 0 0 chrX 95055998 95056053 -71594243 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1310 3887 133 34 23 chrX 95056053 95056640 -71593656 - L1_Mur2 LINE L1 -3814 2063 1468 6 1310 33057 81 24 3 chrX 95056613 95059856 -71590440 - L1Md_F2 LINE L1 -10 6572 3291 6 1310 6013 55 42 4 chrX 95059856 95060639 -71589657 - L1Md_F2 LINE L1 -6 6576 5764 6 1310 33057 97 29 2 chrX 95060639 95063608 -71586688 - L1Md_F2 LINE L1 -2593 3290 212 6 1310 3846 128 9 18 chrX 95063606 95064433 -71585863 - L1_Mur2 LINE L1 -4376 1501 684 6 1310 815 272 17 0 chrX 95064437 95064672 -71585624 - L1_Rod LINE L1 -3909 1938 1700 5 1310 561 267 54 125 chrX 95064688 95064928 -71585368 - MTD LTR MaLR -184 235 13 6 1310 610 316 38 35 chrX 95064981 95065378 -71584918 - L1M2 LINE L1 -1134 5009 4612 6 1310 921 310 167 29 chrX 95065552 95066860 -71583436 + Lx9 LINE L1 1323 2810 -3070 6 1310 1175 303 112 29 chrX 95067012 95068088 -71582208 + Lx9 LINE L1 4516 5680 -200 6 1310 592 312 61 23 chrX 95068127 95068389 -71581907 + Lx8 LINE L1 7200 7471 -2 6 1310 498 274 21 77 chrX 95068527 95068721 -71581575 - MT2A LTR ERVL -72 461 279 6 1310 379 342 47 51 chrX 95068798 95069051 -71581245 - MT2A LTR ERVL -281 252 1 6 1310 299 182 30 0 chrX 95069055 95069121 -71581175 + Lx9 LINE L1 5682 5749 -1947 6 1310 868 289 51 121 chrX 95069122 95069570 -71580726 - MTD LTR MaLR -2 417 1 7 1310 324 332 39 33 chrX 95069570 95069833 -71580463 + Lx9 LINE L1 5746 6001 -1695 6 1310 731 274 119 65 chrX 95070014 95070137 -71580159 - Lx9 LINE L1 -798 6846 6702 7 1310 1066 186 126 48 chrX 95070137 95070470 -71579826 - RLTR10D LTR ERVK 0 359 1 7 1310 731 274 119 65 chrX 95070470 95070682 -71579614 - Lx9 LINE L1 -943 6701 6493 7 1310 728 358 19 32 chrX 95070773 95071143 -71579153 - Lx8 LINE L1 -268 7205 6841 7 1310 2684 209 43 0 chrX 95071193 95071682 -71578614 - Lx5 LINE L1 -4 7046 6537 7 1310 375 23 0 0 chrX 95071827 95071871 -71578425 + (TTA)n Simple_repeat Simple_repeat 2 45 0 7 1310 33539 89 11 6 chrX 95071871 95078015 -71572281 - L1Md_F2 LINE L1 -1 6581 411 7 1310 358 358 90 15 chrX 95078007 95078274 -71572022 - Lx8 LINE L1 -744 6729 6443 7 1310 189 74 0 0 chrX 95078330 95078357 -71571939 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 7 1310 1809 263 57 10 chrX 95078367 95078982 -71571314 - L1_Mur3 LINE L1 -333 5547 4904 7 1310 1067 298 83 27 chrX 95079021 95079742 -71570554 - L1_Mur3 LINE L1 -606 5271 4452 7 1310 284 242 82 22 chrX 95079881 95080016 -71570280 - Lx9 LINE L1 -188 7456 7314 8 1310 440 222 0 10 chrX 95080108 95080208 -71570088 + Lx9 LINE L1 4891 4989 -888 8 1310 1036 116 7 0 chrX 95080212 95080358 -71569938 + B1_Mm SINE Alu 1 147 0 8 1310 298 111 27 27 chrX 95080358 95080432 -71569864 + A-rich Low_complexity Low_complexity 5 78 0 8 1310 541 333 8 24 chrX 95080445 95080725 -71569571 + Lx9 LINE L1 4966 5271 -606 8 1310 321 293 17 0 chrX 95080707 95080823 -71569473 + Lx9 LINE L1 5649 5766 -81 8 1310 30295 87 5 5 chrX 95080832 95082533 -71567763 + L1Md_F2 LINE L1 387 2075 -3808 8 1310 450 0 0 0 chrX 95082533 95082583 -71567713 + (TAA)n Simple_repeat Simple_repeat 2 51 0 8 1310 30295 90 8 9 chrX 95082583 95084650 -71565646 + L1Md_F2 LINE L1 2076 4154 -1729 8 1310 1488 65 0 0 chrX 95084650 95084834 -71565462 + B2_Mm1t SINE B2 3 186 -7 8 1310 30295 90 8 9 chrX 95084834 95086267 -71564029 + L1Md_F2 LINE L1 4155 5584 -299 8 1310 7473 74 1 16 chrX 95086268 95087279 -71563017 + L1Md_F2 LINE L1 5587 6582 0 8 1310 4584 84 7 0 chrX 95087315 95087932 -71562364 + L1_Mus1 LINE L1 5947 6567 0 8 1310 645 14 0 0 chrX 95087957 95088031 -71562265 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 8 1310 373 294 39 42 chrX 95088040 95088262 -71562034 + Lx9 LINE L1 5802 6028 -1616 8 1310 859 317 15 45 chrX 95088473 95088803 -71561493 - MERVL_2A-int LTR ERVL -1741 4020 3701 8 1310 36333 29 4 1 chrX 95088820 95093828 -71556468 + L1Md_T LINE L1 561 5585 -298 9 1310 8425 31 1 0 chrX 95093829 95094876 -71555420 + L1Md_T LINE L1 5587 6582 0 9 1310 468 0 0 0 chrX 95095213 95095265 -71555031 + (GA)n Simple_repeat Simple_repeat 1 52 0 9 1310 579 29 0 0 chrX 95095727 95095796 -71554500 + (TC)n Simple_repeat Simple_repeat 1 69 0 9 1310 272 261 23 0 chrX 95096041 95096129 -71554167 + Lx4A LINE L1 6968 7057 -1 9 1310 1525 317 25 8 chrX 95096225 95096752 -71553544 - Lx8 LINE L1 -543 6930 6395 9 1310 543 227 46 76 chrX 95096760 95097022 -71553274 + Lx7 LINE L1 7344 7597 -99 9 1310 1151 117 0 0 chrX 95097022 95097185 -71553111 + L1_Mur2 LINE L1 5420 5582 -295 9 1310 6920 85 6 30 chrX 95097185 95098203 -71552093 + L1Md_A LINE L1 5589 6582 0 9 1310 5368 179 40 21 chrX 95098203 95098857 -71551439 + Lx4B LINE L1 5955 6636 -422 9 1310 2238 229 127 48 chrX 95098857 95099540 -71550756 - RMER19A LTR ERVK 0 737 1 9 1310 5368 179 40 21 chrX 95099540 95099969 -71550327 + Lx4B LINE L1 6637 7058 0 9 1310 2455 280 61 48 chrX 95099969 95100229 -71550067 + Lx9 LINE L1 1707 1953 -3894 1 1310 497 254 57 0 chrX 95100229 95100351 -71549945 + B1_Mur2 SINE Alu 5 133 -16 1 1310 2455 280 61 48 chrX 95100351 95100501 -71549795 + Lx9 LINE L1 1954 2089 -3758 1 1310 354 45 0 0 chrX 95100501 95100545 -71549751 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1310 2455 280 61 48 chrX 95100545 95101233 -71549063 + Lx9 LINE L1 2090 2798 -3049 1 1310 291 28 0 0 chrX 95101233 95101269 -71549027 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 1310 2455 280 61 48 chrX 95101269 95101683 -71548613 + Lx9 LINE L1 2799 3240 -2607 1 1310 2298 269 63 74 chrX 95101655 95102238 -71548058 + Lx9 LINE L1 3382 3973 -1874 1 1310 703 214 28 0 chrX 95102238 95102383 -71547913 + B1_Mur3 SINE Alu 1 149 0 1 1310 2298 269 63 74 chrX 95102383 95103217 -71547079 + Lx9 LINE L1 3974 4782 -1065 1 1310 38490 6 0 0 chrX 95103242 95108792 -71541504 + L1Md_A LINE L1 37 5586 -297 1 1310 9046 1 0 0 chrX 95108792 95109788 -71540508 + L1Md_A LINE L1 5587 6582 0 1 1310 3118 222 57 21 chrX 95109829 95110722 -71539574 + Lx9 LINE L1 4837 5761 -86 1 1310 6252 89 0 0 chrX 95110723 95111567 -71538729 + L1Md_F LINE L1 269 1112 -5407 1 1310 4086 82 3 21 chrX 95111567 95112140 -71538156 + L1Md_F2 LINE L1 6006 6568 -14 1 1310 183 42 0 0 chrX 95112148 95112172 -71538124 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1 1310 260 339 114 6 chrX 95112172 95112333 -71537963 + Lx9 LINE L1 5791 5970 -1674 1 1310 3182 262 79 39 chrX 95112392 95112502 -71537794 + Lx9 LINE L1 6169 6274 -1370 1 1310 3108 65 10 2 chrX 95112502 95112904 -71537392 - L1_Mus1 LINE L1 -1 6566 6162 1 1310 3182 262 79 39 chrX 95112904 95113460 -71536836 + Lx9 LINE L1 6275 6829 -815 1 1310 5812 104 8 6 chrX 95113460 95114294 -71536002 + Lx2 LINE L1 6162 6997 0 1 1310 3182 262 79 39 chrX 95114294 95114871 -71535425 + Lx9 LINE L1 6830 7462 -182 1 1310 626 172 16 60 chrX 95114862 95115047 -71535249 - Lx9 LINE L1 -549 7095 6919 1 1310 216 0 0 0 chrX 95115066 95115090 -71535206 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 1310 22 0 0 0 chrX 95115176 95115198 -71535098 + AT_rich Low_complexity Low_complexity 1 22 0 1 1310 21 57 0 0 chrX 95115601 95115636 -71534660 + AT_rich Low_complexity Low_complexity 1 35 0 1 1310 423 298 64 108 chrX 95116558 95116761 -71533535 - MER20 DNA MER1_type 0 219 26 1 1310 26 0 0 0 chrX 95118288 95118314 -71531982 + AT_rich Low_complexity Low_complexity 1 26 0 1 1310 300 378 22 7 chrX 95120166 95120302 -71529994 + MIRc SINE MIR 90 227 -41 1 1310 2030 172 37 32 chrX 95121878 95122256 -71528040 - RLTR14 LTR ERV1 0 382 3 1 1310 204 372 32 32 chrX 95122430 95122555 -71527741 + MER5A DNA MER1_type 5 129 -60 1 1310 648 235 14 42 chrX 95123108 95123250 -71527046 - B1_Mus1 SINE Alu -1 147 10 1 1310 421 312 14 0 chrX 95123250 95123388 -71526908 - B1_Mur3 SINE Alu -9 140 1 1 1310 307 280 83 9 chrX 95123388 95123496 -71526800 - B1F SINE Alu -10 139 24 1 1310 218 239 0 0 chrX 95123561 95123607 -71526689 - L2a LINE L2 -8 3418 3373 1 1310 21 36 0 0 chrX 95123953 95123981 -71526315 + AT_rich Low_complexity Low_complexity 1 28 0 1 1310 2090 232 31 13 chrX 95124380 95124838 -71525458 + RLTR31A_Mm LTR ERVK 1 466 -118 1 1310 504 32 0 0 chrX 95124838 95124900 -71525396 + (TC)n Simple_repeat Simple_repeat 2 63 0 1 1310 3875 184 22 4 chrX 95125133 95125844 -71524452 + Lx4A LINE L1 6195 6918 -140 1 1310 3297 153 211 16 chrX 95126293 95127079 -71523217 + L1_Mur1 LINE L1 4678 5616 -270 1 1310 2000 228 62 138 chrX 95127081 95127996 -71522300 + RMER17B LTR ERVK 2 847 -111 1 1310 6526 170 16 4 chrX 95128032 95129290 -71521006 + Lx3C LINE L1 5592 6864 -112 1 1310 3311 48 0 2 chrX 95129898 95130295 -71520001 - MTA_Mm LTR MaLR 0 396 1 1 1310 8387 66 4 2 chrX 95130297 95131391 -71518905 - MTA_Mm-int LTR MaLR -2 1096 1 1 1310 3326 43 2 2 chrX 95131401 95131796 -71518500 - MTA_Mm LTR MaLR -1 395 1 1 1310 220 368 2 0 chrX 95131896 95132000 -71518296 + MIR SINE MIR 54 161 -107 1 1310 212 409 23 0 chrX 95132119 95132207 -71518089 + B4A SINE B4 16 105 -187 1 1310 552 30 0 0 chrX 95132284 95132350 -71517946 + (GA)n Simple_repeat Simple_repeat 1 66 0 1 1310 643 33 22 0 chrX 95132464 95132554 -71517742 + (CA)n Simple_repeat Simple_repeat 1 92 0 1 1310 423 0 0 0 chrX 95132554 95132600 -71517696 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 1310 306 298 37 46 chrX 95132981 95133090 -71517206 - MIRb SINE MIR -130 138 31 1 1310 181 363 88 0 chrX 95133137 95133228 -71517068 + MIRb SINE MIR 88 186 -82 1 1310 1657 108 60 7 chrX 95133704 95133949 -71516347 - Lx3_Mus LINE L1 -833 6176 5924 1 1310 180 77 0 0 chrX 95133949 95133975 -71516321 + (TTG)n Simple_repeat Simple_repeat 1 26 0 1 1310 1657 108 60 7 chrX 95133975 95134010 -71516286 - Lx3_Mus LINE L1 -1086 5923 5881 1 1310 5278 103 5 89 chrX 95133999 95134971 -71515325 - Lx3_Mus LINE L1 -294 5592 4703 1 1310 5721 109 2 7 chrX 95134971 95135800 -71514496 + Lx3_Mus LINE L1 6185 7009 0 1 1310 35948 24 1 30 chrX 95136138 95141344 -71508952 + L1Md_A LINE L1 416 5586 -297 1 1310 8668 23 0 0 chrX 95141344 95142340 -71507956 + L1Md_A LINE L1 5587 6582 0 1 1310 35948 23 0 27 chrX 95142340 95142470 -71507826 + L1Md_A LINE L1 5587 5644 -239 1 1310 531 0 0 0 chrX 95142470 95142529 -71507767 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 1 1310 35948 23 0 27 chrX 95142529 95142728 -71507568 + L1Md_A LINE L1 5645 5789 -94 1 1310 3568 197 34 33 chrX 95142730 95143590 -71506706 + Lx2B LINE L1 5988 6848 -152 1 1310 1073 215 128 36 chrX 95143600 95143904 -71506392 + IAPEY3_LTR LTR ERVK 1 332 0 1 1310 279 248 81 18 chrX 95143906 95144017 -71506279 + Lx2B LINE L1 6883 7000 0 1 1310 614 136 64 0 chrX 95144109 95144234 -71506062 - Lx3A LINE L1 -9 6972 6840 1 1310 359 384 39 9 chrX 95144901 95145132 -71505164 + L1M3a LINE L1 123 360 -5707 1 1310 255 281 53 53 chrX 95145789 95145996 -71504300 + L1M3a LINE L1 3735 3941 -2202 1 1310 4337 58 29 34 chrX 95146025 95146174 -71504122 - L1_Mus1 LINE L1 -1 6566 6434 1 1310 1117 88 0 0 chrX 95146174 95146321 -71503975 + B1_Mus1 SINE Alu 2 148 0 1 1310 4337 58 29 34 chrX 95146321 95146758 -71503538 - L1_Mus1 LINE L1 -134 6433 5983 1 1310 599 276 17 29 chrX 95146758 95146997 -71503299 + L1M3a LINE L1 3927 4162 -1978 1 1310 8178 119 21 10 chrX 95147476 95148996 -71501300 - Lx3A LINE L1 -7 6974 5441 1 1310 358 263 26 0 chrX 95148997 95149111 -71501185 - L1M2 LINE L1 -2059 4084 3968 1 1310 574 314 75 5 chrX 95150315 95150501 -71499795 - RMER30 DNA MER1_type -2 200 2 1 1310 21 36 0 0 chrX 95150667 95150695 -71499601 + AT_rich Low_complexity Low_complexity 1 28 0 1 1310 309 377 64 35 chrX 95150768 95150941 -71499355 - MamGypLTR1a LTR Gypsy -175 609 432 1 1310 1231 234 55 22 chrX 95151238 95151605 -71498691 - L1MD2 LINE L1 -502 5857 5479 1 1310 198 0 0 0 chrX 95151727 95151749 -71498547 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 1310 1553 21 0 0 chrX 95151960 95152147 -71498149 - L1Md_F2 LINE L1 -500 6082 5896 1 1310 3637 77 4 10 chrX 95152147 95152643 -71497653 + L1Md_F2 LINE L1 6090 6582 0 1 1310 810 244 18 102 chrX 95152656 95153100 -71497196 - Lx7 LINE L1 -1777 5919 5509 1 1310 1323 290 45 15 chrX 95153100 95153769 -71496527 + L1_Mur3 LINE L1 3913 4601 -1279 1 1310 283 364 20 27 chrX 95153832 95153979 -71496317 - B1F SINE Alu -3 146 1 1 1310 289 276 81 0 chrX 95153998 95154085 -71496211 - Lx9 LINE L1 -830 6814 6721 1 1310 389 241 41 28 chrX 95154083 95154228 -71496068 - Lx7 LINE L1 -703 5144 4998 1 1310 2007 76 0 18 chrX 95154279 95154560 -71495736 + L1Md_F2 LINE L1 6306 6581 -1 1 1310 1875 277 25 47 chrX 95154578 95154861 -71495435 - Lx7 LINE L1 -1760 4087 3812 1 1310 727 66 19 0 chrX 95154861 95154967 -71495329 + (TA)n Simple_repeat Simple_repeat 2 109 0 1 1310 1875 277 25 47 chrX 95154967 95155497 -71494799 - Lx7 LINE L1 -2036 3811 3292 1 163 36554 55 1 4 chrX 95155497 95163151 -71487145 - L1Md_T LINE L1 0 6585 1 1 1311 2231 251 38 36 chrX 95163148 95163808 -71486488 - Lx7 LINE L1 -2546 3301 2652 1 1311 1511 204 57 27 chrX 95163808 95164175 -71486121 + ORR1C1 LTR MaLR 1 378 0 1 1311 2231 251 38 36 chrX 95164175 95164394 -71485902 - Lx7 LINE L1 -3196 2651 2421 1 1311 29906 56 1 23 chrX 95164411 95171295 -71479001 - L1Md_T LINE L1 0 6582 99 1 1311 2025 215 8 22 chrX 95171309 95172000 -71478296 - L1Md_F LINE L1 -5923 596 2 1 1311 1257 247 157 4 chrX 95172026 95172543 -71477753 - Lx7 LINE L1 -3470 2377 1782 1 1311 687 189 15 23 chrX 95172543 95172673 -71477623 + B1_Mur4 SINE Alu 1 129 -21 1 1311 558 278 0 0 chrX 95172697 95172877 -71477419 + GA-rich Low_complexity Low_complexity 1 180 0 1 1311 664 175 225 25 chrX 95172926 95172974 -71477322 - Lx7 LINE L1 -4061 1786 1739 1 1311 504 0 0 0 chrX 95172974 95173030 -71477266 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 1311 378 0 0 0 chrX 95173030 95173071 -71477225 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1311 664 175 225 25 chrX 95173071 95173261 -71477035 - Lx7 LINE L1 -4109 1738 1500 1 1311 13311 162 25 118 chrX 95173258 95173479 -71476817 - L1_Mur2 LINE L1 -201 5676 5446 1 1311 221 0 35 0 chrX 95173479 95173508 -71476788 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 1311 13311 162 25 118 chrX 95173508 95175156 -71475140 - L1_Mur2 LINE L1 -432 5445 3775 1 1311 183 42 0 0 chrX 95175156 95175180 -71475116 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 1311 13311 162 25 118 chrX 95175180 95176389 -71473907 - L1_Mur2 LINE L1 -2103 3774 2923 1 1311 2792 89 2 37 chrX 95176389 95176799 -71473497 + MTA_Mm LTR MaLR 1 396 0 1 1311 13311 162 25 118 chrX 95176799 95177266 -71473030 - L1_Mur2 LINE L1 -2955 2922 2462 1 1311 946 232 4 11 chrX 95177263 95177533 -71472763 - Lx7 LINE L1 -4369 1478 1211 1 1311 258 94 264 0 chrX 95178366 95178419 -71471877 - Lx4A LINE L1 -765 6293 6227 1 1311 10989 22 0 0 chrX 95178571 95179907 -71470389 + L1_Mm LINE L1 4352 5687 -196 1 1311 498 179 0 0 chrX 95179912 95180007 -71470289 + (TA)n Simple_repeat Simple_repeat 2 96 0 1 1311 711 259 6 80 chrX 95180237 95180413 -71469883 + RSINE1 SINE B4 3 165 0 1 1311 6927 37 0 6 chrX 95180540 95181419 -71468877 - L1Md_T LINE L1 0 6582 5720 1 1311 242 339 0 0 chrX 95181694 95181756 -71468540 + ID SINE ID 20 81 -143 1 1311 234 265 126 0 chrX 95181804 95181955 -71468341 + L1MC LINE L1 4046 4215 -1931 1 1311 236 299 45 0 chrX 95182343 95182410 -71467886 - MER63B DNA AcHobo -30 406 337 1 1311 407 359 5 32 chrX 95182710 95182900 -71467396 + MER5A DNA MER1_type 1 185 -4 1 1311 613 147 110 26 chrX 95183017 95183171 -71467125 + Lx LINE L1 6488 6654 0 1 1311 2458 211 90 19 chrX 95183181 95183814 -71466482 + Lx5 LINE L1 6369 7046 -4 1 1311 282 56 0 0 chrX 95183836 95183872 -71466424 + (GAAAA)n Simple_repeat Simple_repeat 5 40 0 1 1311 761 58 0 10 chrX 95183872 95183976 -71466320 + (GGGA)n Simple_repeat Simple_repeat 2 104 0 1 1311 888 252 111 22 chrX 95184327 95184786 -71465510 - L1M2 LINE L1 -1300 4843 4344 1 1311 557 263 65 7 chrX 95184863 95185001 -71465295 - B1_Mur2 SINE Alu -3 146 1 1 1311 312 361 31 72 chrX 95185001 95185059 -71465237 - ID SINE ID -141 83 34 1 1311 423 294 100 34 chrX 95185108 95185457 -71464839 + L1MA8 LINE L1 4857 5228 -912 1 1311 779 156 73 7 chrX 95185504 95185640 -71464656 - B1_Mur3 SINE Alu 0 149 5 1 1311 653 263 135 23 chrX 95185810 95186252 -71464044 + L1MA8 LINE L1 5494 5996 -295 1 1311 34 42 0 0 chrX 95186332 95186380 -71463916 + AT_rich Low_complexity Low_complexity 1 48 0 1 1311 21 82 0 0 chrX 95186506 95186555 -71463741 + AT_rich Low_complexity Low_complexity 1 49 0 1 1311 9260 135 10 5 chrX 95186882 95189246 -71461050 + Lx2 LINE L1 4265 6643 -354 1 1311 1311 148 0 26 chrX 95189246 95189475 -71460821 + Lx2 LINE L1 6775 6997 0 1 1311 1237 171 175 0 chrX 95189522 95189773 -71460523 + MTD LTR MaLR 67 361 -58 1 1311 420 20 0 0 chrX 95190502 95190551 -71459745 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 1311 201 74 0 0 chrX 95190870 95190897 -71459399 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2 1311 3760 82 56 0 chrX 95190899 95191414 -71458882 - L1_Mus4 LINE L1 -2 6634 6091 2 1311 3531 34 0 0 chrX 95191946 95192363 -71457933 + L1Md_F2 LINE L1 6152 6568 -14 2 1311 328 274 94 10 chrX 95192500 95192596 -71457700 + PB1D10 SINE Alu 6 109 -8 2 1311 397 172 16 0 chrX 95192730 95192794 -71457502 - MIRc SINE MIR -114 154 90 2 1311 369 0 0 0 chrX 95194054 95194095 -71456201 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1311 501 285 151 0 chrX 95194099 95194278 -71456018 - Lx5 LINE L1 -18 7032 6827 2 1311 2558 308 83 54 chrX 95194392 95196090 -71454206 + Lx8 LINE L1 5702 7468 -5 2 1311 1637 149 52 83 chrX 95197129 95197552 -71452744 + RMER17C LTR ERVK 1 410 0 2 1311 235 322 122 0 chrX 95198102 95198217 -71452079 + MIRm SINE MIR 24 152 -124 2 1311 212 326 41 55 chrX 95198571 95198717 -71451579 - MIRb SINE MIR 0 268 125 2 1311 25 51 0 0 chrX 95199041 95199080 -71451216 + AT_rich Low_complexity Low_complexity 1 39 0 2 1311 216 403 0 0 chrX 95199103 95199170 -71451126 - MIR SINE MIR -190 72 6 2 1311 1498 178 54 82 chrX 95200704 95201203 -71449093 - RMER17C LTR ERVK -517 441 16 2 1311 246 304 198 8 chrX 95201206 95201332 -71448964 + MIRb SINE MIR 46 195 -73 2 1311 185 234 20 41 chrX 95201862 95201911 -71448385 + MIRc SINE MIR 18 65 -203 2 1311 263 211 53 0 chrX 95201935 95202011 -71448285 - MIRc SINE MIR 0 268 189 2 1311 246 86 16 49 chrX 95202072 95202133 -71448163 + A-rich Low_complexity Low_complexity 1 59 0 2 1311 261 83 0 0 chrX 95202374 95202410 -71447886 + (TA)n Simple_repeat Simple_repeat 1 36 0 2 1311 2296 39 0 11 chrX 95203071 95203355 -71446941 - L1Md_F3 LINE L1 -17 6567 6287 2 1311 3001 21 2 154 chrX 95203356 95203816 -71446480 - RLTR10 LTR ERVK 0 390 1 2 1311 8172 26 1 2 chrX 95203818 95204814 -71445482 - RLTR10-int LTR ERVK -3 1984 990 2 1311 340 238 54 31 chrX 95204896 95205026 -71445270 - RLTR10-int LTR ERVK -5987 1594 1462 2 1311 5359 43 9 11 chrX 95205090 95205789 -71444507 - RLTR10-int LTR ERVK -989 998 302 2 1311 788 213 42 69 chrX 95205789 95206215 -71444081 - RLTR10 LTR ERVK 0 411 1 2 1311 1964 25 0 0 chrX 95206215 95206451 -71443845 - L1Md_F2 LINE L1 -290 6292 6057 2 1311 2318 61 0 0 chrX 95206438 95206748 -71443548 + L1Md_F2 LINE L1 5716 6025 -557 2 1311 29 47 0 0 chrX 95206974 95207017 -71443279 + AT_rich Low_complexity Low_complexity 1 43 0 2 1311 422 378 0 35 chrX 95207033 95207203 -71443093 - RSINE1 SINE B4 0 165 2 2 1311 7094 66 9 4 chrX 95207305 95208445 -71441851 - L1Md_F2 LINE L1 -12 6570 5424 2 1311 7971 106 24 39 chrX 95209801 95211160 -71439136 - Lx3A LINE L1 -6 6975 5637 2 1311 4190 107 6 1 chrX 95211158 95211821 -71438475 - L1_Mur1 LINE L1 -2452 3434 2769 2 1311 328 280 113 59 chrX 95212045 95212284 -71438012 - MER45B DNA Tip100 -63 977 726 2 1311 430 322 9 0 chrX 95212935 95213050 -71437246 - MER45B DNA Tip100 -878 162 48 2 1311 346 295 28 37 chrX 95213235 95213385 -71436911 + L2c LINE L2 3213 3388 -38 2 1311 34032 57 3 1 chrX 95213955 95219262 -71431034 - L1Md_F3 LINE L1 -14 6570 1256 2 1311 1739 57 0 13 chrX 95219298 95219529 -71430767 + L1Md_F3 LINE L1 6343 6570 -14 2 1311 6088 93 2 0 chrX 95219574 95220392 -71429904 + L1_Mus3 LINE L1 5813 6632 -6 2 1311 2189 173 48 161 chrX 95220392 95220753 -71429543 + Lx5 LINE L1 5094 5447 -1603 2 1311 689 76 61 8 chrX 95220753 95220885 -71429411 + RMER17B LTR ERVK 316 454 -504 2 1311 2189 173 48 161 chrX 95220885 95221370 -71428926 + Lx5 LINE L1 5448 5924 -1126 2 1311 204 40 0 0 chrX 95221521 95221546 -71428750 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 1311 37869 30 0 0 chrX 95221672 95228346 -71421950 - L1Md_T LINE L1 0 6585 1 2 1311 7588 71 1 5 chrX 95228346 95229540 -71420756 - L1_Mus1 LINE L1 -17 6550 5362 2 1311 413 86 0 0 chrX 95229540 95229598 -71420698 - MTC LTR MaLR -363 58 1 2 1311 403 294 34 11 chrX 95229995 95230127 -71420169 - B1F2 SINE Alu -12 137 6 2 1311 22 0 0 0 chrX 95231349 95231371 -71418925 + AT_rich Low_complexity Low_complexity 1 22 0 2 1311 2480 245 83 5 chrX 95231371 95231934 -71418362 - Lx6 LINE L1 -30 7430 6824 2 1311 564 272 56 56 chrX 95232928 95232960 -71417336 - ORR1D2 LTR MaLR 0 370 342 2 1311 3901 68 6 0 chrX 95232960 95233458 -71416838 + L1Md_F2 LINE L1 6080 6580 -2 2 1311 564 267 86 82 chrX 95233458 95233649 -71416647 - ORR1D2 LTR MaLR -29 345 150 2 1311 1809 67 0 0 chrX 95233680 95233919 -71416377 - L1Md_F2 LINE L1 -1 6581 6343 2 1311 51 0 0 0 chrX 95234008 95234059 -71416237 + AT_rich Low_complexity Low_complexity 1 51 0 2 1311 197 284 55 64 chrX 95234193 95234302 -71415994 + MIRb SINE MIR 43 150 -118 2 1311 815 348 60 38 chrX 95234379 95234776 -71415520 + MLT1A1 LTR MaLR 1 406 -2 2 1311 225 0 0 0 chrX 95234835 95234860 -71415436 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 1311 2086 135 6 0 chrX 95235165 95235490 -71414806 + ORR1A2 LTR MaLR 1 327 0 2 1311 1161 273 161 12 chrX 95238120 95238550 -71411746 - Lx8 LINE L1 -341 7132 6639 2 1311 1247 273 25 39 chrX 95238586 95238941 -71411355 + ORR1E LTR MaLR 5 354 -5 2 1311 2531 275 38 5 chrX 95239190 95239800 -71410496 + Lx6 LINE L1 6801 7430 -30 2 1311 1001 314 104 9 chrX 95239832 95240369 -71409927 - L1_Mur3 LINE L1 -30 5850 5263 2 1311 259 156 234 0 chrX 95240377 95240441 -71409855 - Lx8 LINE L1 -6 7467 7389 2 1311 271 271 10 10 chrX 95240448 95240545 -71409751 - L1_Mur3 LINE L1 -1342 4541 4439 2 1311 201 180 0 0 chrX 95240556 95240606 -71409690 + CT-rich Low_complexity Low_complexity 1 50 0 2 1311 1508 308 82 26 chrX 95240619 95241883 -71408413 - L1_Mur3 LINE L1 -1421 4459 3125 2 1311 393 274 32 39 chrX 95241941 95242254 -71408042 - Lx7 LINE L1 -2902 3241 3043 2 1311 396 0 0 0 chrX 95242270 95242314 -71407982 + (TTA)n Simple_repeat Simple_repeat 2 45 0 2 1311 3494 109 92 2 chrX 95242321 95242865 -71407431 - Lx3C LINE L1 -11 6965 6373 2 1311 3969 91 46 3 chrX 95242858 95243442 -71406854 - L1_Mus4 LINE L1 -4 6632 6024 2 1311 1648 91 21 17 chrX 95243442 95243676 -71406620 - Lx3C LINE L1 -602 6374 6140 2 1311 1516 280 83 41 chrX 95243669 95244550 -71405746 - L1_Mur3 LINE L1 -3114 3032 2078 2 1311 377 327 41 39 chrX 95244560 95244923 -71405373 - L1_Rod LINE L1 -4189 1658 1295 2 1311 352 258 237 0 chrX 95245952 95246049 -71404247 - B3A SINE B2 -78 120 1 2 1311 680 261 107 15 chrX 95246049 95246455 -71403841 - L1M2 LINE L1 -694 5609 5156 2 1311 322 299 62 91 chrX 95246763 95247006 -71403290 + L2c LINE L2 3140 3375 -12 2 1311 690 46 0 27 chrX 95247737 95247848 -71402448 - L1Md_F3 LINE L1 -1 6583 6476 2 1311 468 51 0 0 chrX 95248492 95248551 -71401745 + (TTTTC)n Simple_repeat Simple_repeat 2 60 0 2 1311 1119 145 62 62 chrX 95250559 95250867 -71399429 - Lx9 LINE L1 0 7644 7337 2 1311 429 20 0 0 chrX 95251026 95251076 -71399220 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1311 435 365 36 18 chrX 95251076 95251299 -71398997 - Lx8 LINE L1 -146 7327 7101 2 1311 484 288 7 22 chrX 95251309 95251444 -71398852 - Lx9 LINE L1 -468 7176 7044 2 1311 266 326 20 75 chrX 95251654 95251800 -71398496 - RMER4A LTR ERVK -304 162 25 2 1311 231 36 0 0 chrX 95252054 95252082 -71398214 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 1311 486 88 0 0 chrX 95252082 95252149 -71398147 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 1311 558 318 68 59 chrX 95252303 95252641 -71397655 + Lx9 LINE L1 6899 7239 -405 2 1311 1778 262 51 32 chrX 95252748 95253469 -71396827 + Lx9 LINE L1 4930 5664 -183 2 1311 447 224 52 7 chrX 95253464 95253599 -71396697 + Lx7 LINE L1 7556 7696 0 2 1311 2344 307 48 40 chrX 95253603 95254886 -71395410 + Lx9 LINE L1 5688 7115 -529 2 1311 1298 157 58 31 chrX 95254886 95255143 -71395153 - RMER4A LTR ERVK -1 465 202 2 1311 220 280 123 57 chrX 95255119 95255225 -71395071 + B3 SINE B2 98 210 -6 2 1311 846 183 7 0 chrX 95255234 95255376 -71394920 - RMER4A LTR ERVK -270 196 54 2 1311 425 38 0 0 chrX 95255376 95255495 -71394801 - L1Md_F2 LINE L1 0 6582 6513 2 1311 5253 50 3 0 chrX 95255495 95256142 -71394154 + L1_Mm LINE L1 5211 5859 -24 2 1311 349 123 0 3 chrX 95256142 95256206 -71394090 - RMER4A LTR ERVK -517 68 6 2 1311 663 291 39 0 chrX 95256352 95256531 -71393765 + B3 SINE B2 4 189 -27 2 1311 233 311 21 56 chrX 95256573 95256716 -71393580 + Lx9 LINE L1 7233 7370 -274 2 1311 594 28 0 0 chrX 95256730 95256802 -71393494 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 1311 285 146 0 0 chrX 95256827 95256875 -71393421 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 1311 32 43 0 0 chrX 95257310 95257356 -71392940 + AT_rich Low_complexity Low_complexity 1 46 0 2 1311 7741 60 9 0 chrX 95257359 95258382 -71391914 - L1_Mus2 LINE L1 -1 6565 5534 2 1311 545 355 37 37 chrX 95258746 95258989 -71391307 + MIR SINE MIR 4 246 -16 2 1311 183 357 18 0 chrX 95259075 95259131 -71391165 - L2b LINE L2 -204 3171 3115 2 1311 3580 171 114 11 chrX 95259260 95259974 -71390322 + Lx4B LINE L1 6248 7032 -26 2 1311 701 131 29 7 chrX 95259974 95260112 -71390184 + Lx LINE L1 6507 6647 -7 2 1311 262 306 172 35 chrX 95260112 95260143 -71390153 + Lx4B LINE L1 6972 6999 -1 2 1311 361 321 186 21 chrX 95260579 95260773 -71389523 - MIRb SINE MIR -15 253 28 2 1311 4350 113 21 1 chrX 95260793 95261465 -71388831 - L1_Mus4 LINE L1 -5 6631 5947 2 1311 276 372 89 0 chrX 95263406 95263586 -71386710 + MIR SINE MIR 67 262 0 2 1311 1802 174 35 27 chrX 95264785 95265152 -71385144 + L1_Mur1 LINE L1 5247 5616 -270 2 1311 1713 254 94 98 chrX 95265154 95265423 -71384873 + RMER17B LTR ERVK 2 291 -667 2 1311 1074 96 0 7 chrX 95265423 95265434 -71384862 - B1_Mus1 SINE Alu -2 146 136 2 1311 954 113 0 0 chrX 95265434 95265585 -71384711 + (TC)n Simple_repeat Simple_repeat 2 152 0 2 1311 1074 96 0 7 chrX 95265585 95265720 -71384576 - B1_Mus1 SINE Alu -13 135 1 2 1311 1713 254 94 98 chrX 95265720 95266367 -71383929 + RMER17B LTR ERVK 292 914 -44 2 1311 8388 202 59 54 chrX 95266407 95266592 -71383704 + L1_Mur3 LINE L1 1536 1703 -4177 2 1311 5914 88 22 25 chrX 95266592 95267463 -71382833 + Lx3_Mus LINE L1 6142 7009 0 2 1311 8388 202 59 54 chrX 95267463 95267828 -71382468 + L1_Mur3 LINE L1 1704 2074 -3806 2 1311 303 28 0 0 chrX 95267828 95267864 -71382432 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1311 8388 202 59 54 chrX 95267864 95269674 -71380622 + L1_Mur3 LINE L1 2075 3908 -1972 2 1311 246 259 99 0 chrX 95269892 95270023 -71380273 - Lx9 LINE L1 -3 7641 7498 2 1311 266 73 24 0 chrX 95270053 95270094 -71380202 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1311 3207 253 45 32 chrX 95270125 95270988 -71379308 - Lx9 LINE L1 -309 7335 6462 2 1311 3947 241 68 106 chrX 95271007 95272561 -71377735 - L1_Rod LINE L1 -2248 3599 2033 3 1311 1059 142 0 0 chrX 95272561 95272737 -71377559 + (TCC)n Simple_repeat Simple_repeat 3 178 0 3 1311 3947 241 68 106 chrX 95272737 95272748 -71377548 - L1_Rod LINE L1 -3815 2032 2027 3 1311 1620 0 0 0 chrX 95272748 95272928 -71377368 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 3 1311 3947 241 68 106 chrX 95272928 95273015 -71377281 - L1_Rod LINE L1 -3821 2026 1945 3 1311 285 133 0 62 chrX 95273015 95273079 -71377217 - B1_Mus1 SINE Alu -88 60 1 3 1311 3947 241 68 106 chrX 95273079 95273494 -71376802 - L1_Rod LINE L1 -3821 1944 1548 3 1311 1115 277 51 3 chrX 95273494 95273961 -71376335 - L1_Rod LINE L1 -4447 1400 911 3 1311 450 305 0 0 chrX 95275337 95275442 -71374854 - PB1D10 SINE Alu -1 116 12 3 1311 347 347 0 0 chrX 95275358 95275453 -71374843 - ID_B1 SINE B4 -48 176 82 3 1311 325 329 55 0 chrX 95275455 95275601 -71374695 - L1MD LINE L1 -1277 4869 4716 3 1311 1328 308 64 32 chrX 95275646 95276337 -71373959 - Lx9 LINE L1 -17 7627 6915 3 1311 1332 57 80 0 chrX 95276367 95276526 -71373770 + B2_Mm1a SINE B2 2 174 -19 3 1311 351 0 0 0 chrX 95276526 95276565 -71373731 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 3 1311 1332 57 80 0 chrX 95276565 95276581 -71373715 + B2_Mm1a SINE B2 175 190 -3 3 1311 1374 93 0 0 chrX 95276607 95276800 -71373496 + L1_Mus2 LINE L1 6374 6566 0 3 1311 820 267 33 0 chrX 95276828 95277063 -71373233 + Lx5 LINE L1 6264 6722 -738 3 1311 250 311 60 15 chrX 95277060 95277194 -71373102 + Lx7 LINE L1 7209 7348 -348 3 1311 27 81 0 0 chrX 95277221 95277283 -71373013 + AT_rich Low_complexity Low_complexity 1 62 0 3 1311 608 274 76 5 chrX 95277283 95277481 -71372815 + Lx8 LINE L1 5358 5569 -311 3 1311 1168 218 21 0 chrX 95277498 95277741 -71372555 - Lx9 LINE L1 -272 7372 7125 3 1311 484 203 182 36 chrX 95277740 95277965 -71372331 + Lx9 LINE L1 7385 7642 -2 3 1311 2462 274 48 16 chrX 95277966 95278346 -71371950 + Lx8 LINE L1 5527 5951 -1522 3 1311 1889 80 60 4 chrX 95278346 95278611 -71371685 + L1_Mus2 LINE L1 6287 6566 0 3 1311 2462 334 52 46 chrX 95278611 95279857 -71370439 + Lx8 LINE L1 5952 7181 -292 3 1311 4437 152 70 12 chrX 95279859 95280711 -71369585 + RLTR13D6 LTR ERVK 1 902 0 3 1311 189 107 0 0 chrX 95280866 95280894 -71369402 + (GA)n Simple_repeat Simple_repeat 1 28 0 3 1311 8519 55 1 1 chrX 95281398 95282515 -71367781 + L1Md_F2 LINE L1 4469 5585 -298 3 1311 7753 59 1 22 chrX 95282517 95283533 -71366763 + L1Md_F2 LINE L1 5588 6582 0 3 1311 1420 119 8 0 chrX 95284033 95284268 -71366028 - L1_Mur1 LINE L1 -1940 3946 3710 3 1311 1187 293 5 9 chrX 95284266 95284595 -71365701 + Lx5 LINE L1 6591 7084 -612 3 1311 2728 212 58 5 chrX 95284596 95285165 -71365131 + RMER20B LTR ERVK 1 599 -28 3 1311 501 17 0 0 chrX 95285392 95285450 -71364846 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 1311 317 306 73 29 chrX 95285909 95286267 -71364029 + L1M3 LINE L1 3632 4020 -2120 3 1311 511 322 133 3 chrX 95286464 95286849 -71363447 - MER99 DNA hAT? -395 436 2 3 1311 429 279 35 23 chrX 95286952 95287209 -71363087 + L1M3 LINE L1 4374 4633 -1507 3 1311 2923 172 34 13 chrX 95287215 95287769 -71362527 - RMER1A Other Other -14 1016 451 3 1311 4252 236 60 34 chrX 95287926 95289225 -71361071 + Lx9 LINE L1 6311 7643 -1 3 1312 373 355 90 48 chrX 95289359 95289548 -71360748 + ORR1E LTR MaLR 1 197 -162 3 1312 483 289 43 35 chrX 95289737 95289995 -71360301 + L1M3 LINE L1 5322 5581 -731 3 1312 543 317 33 44 chrX 95290035 95290309 -71359987 + B4A SINE B4 3 273 -19 3 1312 1249 61 0 16 chrX 95290345 95290595 -71359701 + (CA)n Simple_repeat Simple_repeat 1 245 0 3 1312 746 286 22 40 chrX 95290603 95290876 -71359420 - Lx8 LINE L1 -882 6591 6324 3 1312 560 358 84 3 chrX 95291328 95291709 -71358587 - Lx8 LINE L1 -189 7284 6873 3 1312 1310 241 87 6 chrX 95291793 95292127 -71358169 - MTD LTR MaLR -58 361 1 3 1312 481 68 13 13 chrX 95292697 95292772 -71357524 + (TA)n Simple_repeat Simple_repeat 2 76 0 3 1312 324 70 0 0 chrX 95292781 95292824 -71357472 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 1312 297 0 0 0 chrX 95293061 95293094 -71357202 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1312 477 0 0 0 chrX 95293094 95293146 -71357150 + (GA)n Simple_repeat Simple_repeat 2 54 0 3 1312 2169 201 66 13 chrX 95293148 95293602 -71356694 + RLTR20B1 LTR ERVK 1 478 -85 3 1312 1294 113 50 0 chrX 95293616 95293837 -71356459 - Lx2 LINE L1 -1 6996 6765 3 1312 3233 144 41 87 chrX 95293826 95294502 -71355794 - Lx2 LINE L1 -352 6645 6001 3 1312 4382 165 19 91 chrX 95294500 95294775 -71355521 + L1_Mur2 LINE L1 4054 4319 -1558 3 1312 859 103 70 42 chrX 95294775 95294917 -71355379 + B1_Mus2 SINE Alu 1 146 -1 3 1312 4382 165 19 91 chrX 95294917 95295743 -71354553 + L1_Mur2 LINE L1 4320 5076 -801 3 1312 6668 33 0 0 chrX 95295740 95296565 -71353731 - L1Md_T LINE L1 -137 6445 5621 3 1312 1010 23 0 0 chrX 95296565 95296694 -71353602 + L1Md_T LINE L1 6453 6581 -1 3 1312 1466 224 68 38 chrX 95296694 95297093 -71353203 + Lx4B LINE L1 6626 7036 -22 3 1312 342 0 0 0 chrX 95297093 95297131 -71353165 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 3 1312 3919 174 28 26 chrX 95297137 95297428 -71352868 + Lx2 LINE L1 5066 5355 -528 3 1312 3395 65 2 24 chrX 95297428 95297883 -71352413 + L1_Mus2 LINE L1 6122 6566 0 3 1312 3919 140 25 11 chrX 95297883 95298512 -71351784 + Lx2 LINE L1 5356 5988 -1009 3 1312 384 241 28 28 chrX 95298512 95298620 -71351676 + RLTR20B1 LTR ERVK 453 560 0 3 1312 313 274 19 10 chrX 95298648 95298751 -71351545 + Lx8 LINE L1 7021 7124 -349 3 1312 9559 41 1 0 chrX 95298890 95301141 -71349155 + L1Md_Gf LINE L1 1 2201 -3685 3 1312 2837 14 5 121 chrX 95301141 95301556 -71348740 + IAPLTR1_Mm LTR ERVK 1 367 0 3 1312 936 125 74 0 chrX 95301556 95301732 -71348564 + IAPEz-int LTR ERVK 8 196 -6285 3 1312 6485 79 132 37 chrX 95301706 95302892 -71347404 + IAPEz-int LTR ERVK 70 1313 -5168 3 1312 27557 20 1 1 chrX 95302890 95306162 -71344134 + IAPEz-int LTR ERVK 3209 6481 0 3 1312 2939 27 5 16 chrX 95306162 95306533 -71343763 + IAPLTR1_Mm LTR ERVK 1 367 0 3 1312 26940 33 0 0 chrX 95306533 95309927 -71340369 + L1Md_T LINE L1 2193 5586 -297 3 1312 8995 5 0 2 chrX 95309927 95310924 -71339372 + L1Md_T LINE L1 5587 6581 -1 3 1312 24 32 0 0 chrX 95310939 95310970 -71339326 + AT_rich Low_complexity Low_complexity 1 31 0 3 1312 720 0 0 0 chrX 95311027 95311107 -71339189 + (TCTCCC)n Simple_repeat Simple_repeat 6 85 0 3 1312 7950 124 20 39 chrX 95311127 95313482 -71336814 - Lx3C LINE L1 -9 6967 4653 3 1312 20770 80 5 3 chrX 95313473 95317333 -71332963 + L1Md_F2 LINE L1 390 4258 -1625 3 1312 395 103 0 0 chrX 95317351 95317409 -71332887 + MTC LTR MaLR 1 58 -363 3 1312 1732 62 0 0 chrX 95317409 95317634 -71332662 + L1Md_F2 LINE L1 5362 5586 -297 3 1312 8135 42 4 0 chrX 95317635 95318612 -71331684 + L1Md_F2 LINE L1 5588 6568 -14 3 1312 188 314 31 78 chrX 95318773 95318901 -71331395 + MIR SINE MIR 66 187 -75 3 1312 672 183 186 9 chrX 95318903 95319129 -71331167 + Lx9 LINE L1 7374 7639 -5 3 1312 23 68 0 0 chrX 95319497 95319541 -71330755 + AT_rich Low_complexity Low_complexity 1 44 0 3 1312 1256 295 18 28 chrX 95319675 95320015 -71330281 - Lx9 LINE L1 -157 7487 7144 3 1312 2543 134 23 25 chrX 95320015 95320452 -71329844 - Lx2 LINE L1 -1 6996 6561 3 1312 1256 295 18 28 chrX 95320452 95320607 -71329689 - Lx9 LINE L1 -501 7143 6997 3 1312 1810 256 23 11 chrX 95320607 95321084 -71329212 + Lx9 LINE L1 6400 6882 -762 3 1312 1008 301 98 89 chrX 95321090 95321652 -71328644 + RLTR18 LTR ERVK 9 575 -41 3 1312 565 192 0 20 chrX 95321685 95321834 -71328462 + Lx9 LINE L1 7497 7642 -2 3 1312 2005 294 71 20 chrX 95321864 95322663 -71327633 - Lx9 LINE L1 -463 7181 6342 3 1312 255 31 0 0 chrX 95322664 95322696 -71327600 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1312 4311 250 101 62 chrX 95322733 95324127 -71326169 - Lx9 LINE L1 -1536 6108 4602 3 1312 647 25 12 0 chrX 95324127 95324208 -71326088 + (TTTC)n Simple_repeat Simple_repeat 4 85 0 3 1312 4311 250 108 65 chrX 95324208 95325579 -71324717 - Lx9 LINE L1 -1246 4601 3191 3 1312 21 0 0 0 chrX 95326305 95326326 -71323970 + AT_rich Low_complexity Low_complexity 1 21 0 3 1312 271 307 84 21 chrX 95326607 95326765 -71323531 + MIRb SINE MIR 12 179 -89 3 1312 411 299 107 68 chrX 95327441 95327720 -71322576 + MER102a DNA MER1_type 29 293 -37 3 1312 279 312 81 81 chrX 95328058 95328194 -71322102 + L2b LINE L2 3244 3379 -8 3 1312 6872 119 16 4 chrX 95328243 95329778 -71320518 - Lx LINE L1 -12 6642 5113 3 1312 235 350 121 8 chrX 95329912 95330036 -71320260 + MTE-int LTR MaLR 176 313 -1267 3 1312 293 256 16 8 chrX 95330063 95330185 -71320111 - Lx6 LINE L1 -26 7434 7312 3 1312 352 374 58 94 chrX 95330382 95330775 -71319521 + MTE-int LTR MaLR 548 926 -654 3 1312 578 348 85 12 chrX 95330891 95331150 -71319146 + MTE-int LTR MaLR 1231 1508 -72 3 1312 693 303 11 78 chrX 95331159 95331469 -71318827 + ORR1D1 LTR MaLR 1 280 -104 3 1312 372 354 25 15 chrX 95331514 95331712 -71318584 + L1M4 LINE L1 4983 5182 -964 3 1312 757 301 54 47 chrX 95331881 95331931 -71318365 + L1MA4 LINE L1 5586 5635 -665 3 1312 588 29 0 0 chrX 95331931 95332001 -71318295 + (TC)n Simple_repeat Simple_repeat 2 71 0 3 1312 757 301 54 47 chrX 95332001 95332378 -71317918 + L1MA4 LINE L1 5636 6016 -284 3 1312 2162 249 36 35 chrX 95332842 95333642 -71316654 + Lx9 LINE L1 5156 5981 -1492 3 1312 886 179 179 0 chrX 95333642 95333832 -71316464 - URR1B DNA MER1_type -1 224 1 3 1312 1069 319 58 55 chrX 95333832 95334539 -71315757 + Lx9 LINE L1 5982 6819 -825 3 1312 333 312 0 0 chrX 95334647 95334740 -71315556 + Lx9 LINE L1 7077 7169 -475 3 1312 290 374 12 0 chrX 95334862 95334945 -71315351 - RSINE1 SINE B4 -14 151 68 3 1312 243 136 152 0 chrX 95335114 95335173 -71315123 + L1M4 LINE L1 5830 5897 -281 3 1312 381 338 14 34 chrX 95335308 95335455 -71314841 - RSINE1 SINE B4 -19 146 3 3 1312 465 0 0 0 chrX 95335458 95335511 -71314785 - ORR1A1 LTR MaLR 0 346 294 3 1312 1041 28 138 0 chrX 95335516 95335661 -71314635 - ORR1A1 LTR MaLR -181 165 1 3 1312 12921 71 20 2 chrX 95335661 95337421 -71312875 - ORR1A1-int LTR MaLR 0 1792 1 3 1312 1710 29 0 0 chrX 95337421 95337627 -71312669 - ORR1A1 LTR MaLR 0 346 141 3 1312 774 314 8 8 chrX 95337627 95337836 -71312460 + Lx9 LINE L1 7201 7411 -233 3 1312 414 57 0 0 chrX 95337836 95337889 -71312407 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1312 774 314 8 8 chrX 95337889 95337939 -71312357 + Lx9 LINE L1 7412 7459 -185 3 1312 1273 274 35 6 chrX 95338177 95338489 -71311807 - Lx9 LINE L1 -884 6760 6440 3 1312 1709 280 154 33 chrX 95338477 95339256 -71311040 + Lx9 LINE L1 6772 7644 0 3 1312 812 284 91 41 chrX 95339399 95339862 -71310434 + L1ME1 LINE L1 5544 6029 -150 3 1312 1890 76 0 12 chrX 95339918 95340172 -71310124 + L1_Mus1 LINE L1 6317 6567 0 3 1312 513 0 0 0 chrX 95340184 95340241 -71310055 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 3 1312 1810 26 53 0 chrX 95340307 95340535 -71309761 + L1Md_F3 LINE L1 6343 6582 -2 3 1312 184 357 24 12 chrX 95340912 95340997 -71309299 - L2 LINE L2 -698 2721 2636 3 1312 911 273 25 58 chrX 95341409 95341685 -71308611 + B4 SINE B4 7 273 -19 3 1312 360 0 0 0 chrX 95341687 95341727 -71308569 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1312 1420 73 11 0 chrX 95342197 95342388 -71307908 + B2_Mm1t SINE B2 1 193 0 3 1312 282 116 0 0 chrX 95343969 95344012 -71306284 + (GGGGA)n Simple_repeat Simple_repeat 4 46 0 3 1312 21 0 0 0 chrX 95345301 95345322 -71304974 + GC_rich Low_complexity Low_complexity 1 21 0 3 1312 336 133 0 0 chrX 95345639 95345699 -71304597 + (CAG)n Simple_repeat Simple_repeat 1 60 0 3 1312 201 121 0 0 chrX 95350141 95350174 -71300122 + (CTA)n Simple_repeat Simple_repeat 3 35 0 3 1312 669 306 68 30 chrX 95351651 95352120 -71298176 - L1MB8 LINE L1 -6 6172 5686 3 1312 881 228 117 0 chrX 95352144 95352324 -71297972 - B3 SINE B2 -7 209 9 3 1312 276 276 0 0 chrX 95352327 95352425 -71297871 - L1M4 LINE L1 -521 5658 5561 3 1312 393 22 0 0 chrX 95352551 95352597 -71297699 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1312 380 223 165 10 chrX 95352602 95352726 -71297570 - B3A SINE B2 -41 157 1 4 1312 192 77 0 0 chrX 95352728 95352754 -71297542 + (CAT)n Simple_repeat Simple_repeat 2 27 0 4 1312 455 274 128 17 chrX 95352772 95353057 -71297239 - L1M4 LINE L1 -712 5462 5125 3 1312 402 21 0 0 chrX 95353057 95353104 -71297192 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1312 455 297 167 28 chrX 95353104 95353439 -71296857 - L1M4 LINE L1 -1022 5124 4759 3 1312 876 315 82 15 chrX 95353818 95354163 -71296133 - Lx9 LINE L1 -959 6685 6318 4 1312 232 247 31 92 chrX 95354318 95354408 -71295888 - Lx9 LINE L1 -1561 6083 5995 4 1312 1131 185 13 22 chrX 95354408 95354635 -71295661 + URR1B DNA MER1_type 1 225 0 4 1312 232 247 31 92 chrX 95354635 95354740 -71295556 - Lx9 LINE L1 -1650 5994 5900 4 1312 549 241 13 22 chrX 95354742 95354905 -71295391 + L1M2 LINE L1 3620 3779 -2367 4 1312 267 250 30 145 chrX 95355032 95355154 -71295142 + L1_Rod LINE L1 4483 4601 -1246 4 1312 477 0 0 0 chrX 95355154 95355207 -71295089 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1312 267 250 30 145 chrX 95355207 95355318 -71294978 + L1_Rod LINE L1 4602 4689 -1158 4 1312 319 340 133 24 chrX 95355465 95355854 -71294442 - L2a LINE L2 -9 3378 2936 4 1312 361 360 102 10 chrX 95355998 95356301 -71293995 - L2a LINE L2 -632 2787 2457 4 1312 23 33 0 0 chrX 95356378 95356408 -71293888 + AT_rich Low_complexity Low_complexity 1 30 0 4 1312 336 287 46 9 chrX 95356649 95356758 -71293538 - MIR3 SINE MIR -46 162 50 4 1312 589 275 24 30 chrX 95357021 95357186 -71293110 - Lx8 LINE L1 -134 7339 7176 4 1312 300 262 49 0 chrX 95357520 95357630 -71292666 - MIR SINE MIR -71 191 80 4 1312 252 0 0 0 chrX 95357631 95357659 -71292637 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1312 185 373 0 0 chrX 95359108 95359175 -71291121 + L2c LINE L2 3283 3349 -38 4 1312 186 43 0 0 chrX 95359420 95359443 -71290853 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 1312 450 0 0 0 chrX 95359678 95359728 -71290568 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1312 378 350 85 6 chrX 95360464 95360628 -71289668 + MER102a DNA MER1_type 151 327 -3 4 1312 333 295 165 35 chrX 95360709 95360909 -71289387 + MIRb SINE MIR 23 248 -20 4 1312 195 100 0 0 chrX 95361315 95361345 -71288951 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1312 238 260 0 0 chrX 95361429 95361479 -71288817 + (CAT)n Simple_repeat Simple_repeat 2 51 0 4 1312 1009 55 0 14 chrX 95361479 95361626 -71288670 + (CCA)n Simple_repeat Simple_repeat 2 146 0 4 1312 510 236 69 6 chrX 95362602 95362777 -71287519 - Lx9 LINE L1 -32 7612 7427 4 1312 769 271 55 22 chrX 95362779 95363051 -71287245 - Lx9 LINE L1 -363 7281 7001 4 1312 227 324 84 45 chrX 95363923 95364078 -71286218 - MIRc SINE MIR -23 245 85 4 1312 2220 70 0 0 chrX 95364110 95364394 -71285902 - Lx3A LINE L1 -110 6871 6588 4 1312 350 290 67 101 chrX 95365037 95365269 -71285027 - MIRc SINE MIR -48 220 3 4 1312 276 30 0 0 chrX 95365523 95365556 -71284740 + (TC)n Simple_repeat Simple_repeat 2 34 0 4 1312 268 348 78 92 chrX 95366895 95367101 -71283195 + B4 SINE B4 35 237 -55 4 1312 435 149 0 0 chrX 95368064 95368138 -71282158 + (TTA)n Simple_repeat Simple_repeat 2 75 0 4 1312 441 108 72 0 chrX 95369890 95369973 -71280323 - Lx LINE L1 -4 6650 6562 4 1312 697 205 135 0 chrX 95370385 95370600 -71279696 + Lx9 LINE L1 7379 7622 -22 4 1312 488 307 36 72 chrX 95371959 95372412 -71277884 - Lx9 LINE L1 -1543 6153 5710 4 1312 2253 291 103 33 chrX 95372430 95372512 -71277784 - Lx9 LINE L1 -27 7617 7537 4 1312 269 26 26 0 chrX 95372512 95372550 -71277746 + (TTA)n Simple_repeat Simple_repeat 1 39 0 4 1312 2253 291 103 33 chrX 95372550 95373473 -71276823 - Lx9 LINE L1 -108 7536 6543 4 1312 1233 283 51 17 chrX 95373457 95373924 -71276372 - Lx9 LINE L1 -122 5758 5276 4 1312 4286 68 2 2 chrX 95374171 95374728 -71275568 + L1Md_T LINE L1 6026 6582 0 4 1312 4180 69 5 5 chrX 95375039 95375596 -71274700 - L1Md_F2 LINE L1 0 6582 6026 4 1312 347 296 15 60 chrX 95376197 95376398 -71273898 - L1MB8 LINE L1 -14 6164 5973 4 1312 372 239 73 53 chrX 95376427 95376639 -71273657 - L1MB8 LINE L1 -707 5593 5381 4 1312 29 60 0 0 chrX 95376651 95376701 -71273595 + AT_rich Low_complexity Low_complexity 1 50 0 4 1312 1912 332 82 7 chrX 95376882 95377824 -71272472 - Lx8 LINE L1 -244 7229 6218 4 1312 1045 273 45 18 chrX 95377993 95378457 -71271839 - Lx8 LINE L1 -1641 6003 5492 4 1312 683 262 27 7 chrX 95379077 95379227 -71271069 - RSINE1 SINE B4 -2 163 11 4 1312 241 282 26 35 chrX 95379577 95379691 -71270605 - Lx8 LINE L1 -8 7465 7353 4 1312 3020 302 88 35 chrX 95379702 95381256 -71269040 - Lx8 LINE L1 -5 7468 5829 4 1312 5411 251 113 24 chrX 95381282 95383373 -71266923 - Lx8 LINE L1 -132 5748 3473 4 1312 584 290 37 22 chrX 95383436 95383704 -71266592 - Lx8 LINE L1 -3086 2794 2523 4 1312 775 304 4 13 chrX 95383721 95383951 -71266345 - Lx9 LINE L1 -1075 6569 6342 4 1312 675 75 0 0 chrX 95383958 95384052 -71266244 + (TAGA)n Simple_repeat Simple_repeat 3 96 0 4 1312 1966 317 26 50 chrX 95384418 95385113 -71265183 - Lx8 LINE L1 -1558 5915 5241 4 1312 280 59 39 0 chrX 95385113 95385164 -71265132 + (TTG)n Simple_repeat Simple_repeat 2 54 0 4 1312 1966 316 25 52 chrX 95385164 95385561 -71264735 - Lx8 LINE L1 -640 5240 4847 4 1312 203 228 70 0 chrX 95385668 95385725 -71264571 + MIR SINE MIR 202 262 0 4 1312 28 0 0 0 chrX 95386381 95386409 -71263887 + AT_rich Low_complexity Low_complexity 1 28 0 4 1312 3986 148 48 6 chrX 95386409 95387100 -71263196 - Lx3C LINE L1 0 6976 6257 4 1312 2813 136 42 2 chrX 95387101 95387573 -71262723 - Lx8 LINE L1 -1293 4584 4094 4 1312 259 79 0 0 chrX 95387557 95387595 -71262701 + L1_Mur2 LINE L1 4092 4129 -1748 4 1312 561 332 36 9 chrX 95387629 95387848 -71262448 - Lx9 LINE L1 -354 7290 7066 4 1312 1664 316 60 64 chrX 95387887 95388986 -71261310 + Lx8 LINE L1 5707 6801 -672 4 1312 883 151 217 0 chrX 95389031 95389243 -71261053 - Lx9 LINE L1 -9 7635 7378 4 1312 328 246 0 16 chrX 95389304 95389366 -71260930 - PB1D10 SINE Alu -40 77 17 4 1312 343 56 0 0 chrX 95389894 95389948 -71260348 - L1_Mus3 LINE L1 -6 6632 6579 4 1312 1655 202 40 24 chrX 95390104 95390293 -71260003 - Lx9 LINE L1 -696 6948 6753 4 1312 483 18 0 0 chrX 95390293 95390349 -71259947 + (TC)n Simple_repeat Simple_repeat 1 56 0 4 1312 378 42 0 0 chrX 95390350 95390398 -71259898 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1312 1655 202 40 24 chrX 95390398 95390581 -71259715 - Lx9 LINE L1 -892 6752 6568 4 1312 1210 246 133 16 chrX 95390581 95391011 -71259285 + Lx9 LINE L1 7164 7643 -1 4 1312 1156 76 0 0 chrX 95391144 95391289 -71259007 - B1_Mus2 SINE Alu -1 146 2 4 1312 195 42 0 0 chrX 95391440 95391464 -71258832 + (TA)n Simple_repeat Simple_repeat 1 24 0 4 1312 204 40 0 0 chrX 95391511 95391536 -71258760 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1312 315 71 0 0 chrX 95391565 95391607 -71258689 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 1312 279 0 0 0 chrX 95391652 95391683 -71258613 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1312 729 294 68 99 chrX 95391753 95392047 -71258249 + MTEb LTR MaLR 49 333 -46 4 1312 2628 109 43 0 chrX 95392612 95393007 -71257289 + L1_Mus4 LINE L1 6223 6634 -2 4 1312 1428 340 52 38 chrX 95393294 95394113 -71256183 - Lx8 LINE L1 -4 7469 6639 4 1312 1162 243 0 0 chrX 95394111 95394350 -71255946 - Lx9 LINE L1 -673 6971 6733 4 1312 1578 179 103 0 chrX 95394349 95394707 -71255589 + Lx9 LINE L1 7245 7639 -5 4 1312 243 0 0 0 chrX 95395358 95395385 -71254911 + (TTG)n Simple_repeat Simple_repeat 2 28 0 4 1312 2157 288 109 52 chrX 95396075 95397244 -71253052 - Lx9 LINE L1 -341 7303 6068 4 1312 291 252 35 53 chrX 95397244 95397357 -71252939 - Lx9 LINE L1 -1692 5952 5842 4 1312 378 91 0 0 chrX 95398258 95398313 -71251983 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1312 405 0 0 0 chrX 95398313 95398358 -71251938 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1312 706 219 112 11 chrX 95399473 95399674 -71250622 + B3A SINE B2 6 216 0 4 1312 203 362 31 31 chrX 95399895 95399992 -71250304 - MIRm SINE MIR -171 105 9 4 1312 261 0 0 0 chrX 95400162 95400191 -71250105 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1312 261 0 0 0 chrX 95401012 95401041 -71249255 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 1312 532 267 106 5 chrX 95402652 95402840 -71247456 + B3 SINE B2 1 207 -9 4 1312 356 293 109 39 chrX 95403032 95403160 -71247136 + MIRc SINE MIR 47 183 -85 4 1312 249 304 20 0 chrX 95404157 95404259 -71246037 - Lx9 LINE L1 -29 7615 7512 4 1312 225 65 0 0 chrX 95404840 95404871 -71245425 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1312 985 120 26 14 chrX 95405665 95405821 -71244475 + B1_Mus1 SINE Alu 14 311 0 4 1312 238 284 150 78 chrX 95405821 95405842 -71244454 + FAM SINE Alu 294 311 0 4 1312 305 233 58 0 chrX 95406110 95406213 -71244083 - Lx7 LINE L1 0 7696 7588 4 1312 1450 35 0 6 chrX 95406661 95406835 -71243461 - B2_Mm1a SINE B2 -19 174 2 4 1312 22 35 0 0 chrX 95406872 95406901 -71243395 + AT_rich Low_complexity Low_complexity 1 29 0 4 1312 659 120 0 9 chrX 95406995 95407104 -71243192 + (TCTCCC)n Simple_repeat Simple_repeat 1 108 0 4 1312 1615 254 51 15 chrX 95407206 95407597 -71242699 - MTD LTR MaLR -2 417 13 4 1312 1510 339 49 16 chrX 95407639 95408277 -71242019 - Lx7 LINE L1 -469 7227 6569 4 1312 242 197 145 0 chrX 95408377 95408453 -71241843 + Lx9 LINE L1 7509 7595 -49 4 1312 32 0 0 0 chrX 95408460 95408492 -71241804 + AT_rich Low_complexity Low_complexity 1 32 0 4 1312 222 140 19 39 chrX 95409117 95409169 -71241127 + T-rich Low_complexity Low_complexity 3 53 0 4 1312 27 29 0 0 chrX 95409399 95409433 -71240863 + AT_rich Low_complexity Low_complexity 1 34 0 4 1312 238 266 195 35 chrX 95410204 95410317 -71239979 + MER20 DNA MER1_type 23 153 -66 4 1312 964 265 74 100 chrX 95410318 95410737 -71239559 + MTD LTR MaLR 12 419 0 4 1312 207 0 0 0 chrX 95411929 95411952 -71238344 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1312 246 128 0 0 chrX 95411952 95411990 -71238306 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 1312 596 301 54 6 chrX 95412788 95412942 -71237354 + B4A SINE B4 112 273 -19 4 1312 266 73 0 24 chrX 95412942 95412984 -71237312 + (CATA)n Simple_repeat Simple_repeat 4 44 0 4 1312 596 301 54 6 chrX 95412984 95412996 -71237300 + B4A SINE B4 274 285 -7 4 1312 24 0 0 0 chrX 95413315 95413339 -71236957 + AT_rich Low_complexity Low_complexity 1 24 0 4 1312 1612 235 44 3 chrX 95413506 95413890 -71236406 - Lx9 LINE L1 -327 7317 6918 4 1312 27 0 0 0 chrX 95414328 95414355 -71235941 + AT_rich Low_complexity Low_complexity 1 27 0 5 1312 441 0 0 0 chrX 95414470 95414519 -71235777 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1312 2485 309 102 26 chrX 95415757 95416866 -71233430 - Lx8 LINE L1 -223 7250 6058 5 20 35367 35 0 0 chrX 95417912 95423517 -71226779 + L1Md_T LINE L1 1 5589 -297 5 1313 8939 6 0 0 chrX 95423517 95424510 -71225786 + L1Md_T LINE L1 5590 6582 -3 5 1313 228 67 0 0 chrX 95424514 95424544 -71225752 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1313 396 301 71 12 chrX 95424635 95424887 -71225409 - L1MA7 LINE L1 -4 6287 6021 5 1313 483 206 10 0 chrX 95425566 95425663 -71224633 + MIRc SINE MIR 166 263 -5 5 1313 956 42 248 7 chrX 95426380 95426525 -71223771 - B2_Mm2 SINE B2 -14 181 2 5 1313 279 0 0 0 chrX 95426648 95426679 -71223617 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 5 1313 28 48 0 0 chrX 95426746 95426788 -71223508 + AT_rich Low_complexity Low_complexity 1 42 0 5 1313 23 0 0 0 chrX 95426825 95426848 -71223448 + AT_rich Low_complexity Low_complexity 1 23 0 5 1313 487 238 26 39 chrX 95426999 95427152 -71223144 - MER3 DNA MER1_type -30 179 29 5 1313 441 254 58 82 chrX 95427838 95428111 -71222185 - L1M5 LINE L1 -634 5490 5221 5 1313 4434 25 31 0 chrX 95428702 95429222 -71221074 - L1Md_T LINE L1 -1 6581 6046 5 1313 456 317 51 47 chrX 95429586 95429821 -71220475 + L1MB7 LINE L1 487 722 -6612 5 1313 706 90 19 88 chrX 95430509 95430668 -71219628 + RMER17B LTR ERVK 312 459 -499 5 1313 207 69 0 0 chrX 95430668 95430697 -71219599 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1313 644 305 137 30 chrX 95430724 95431532 -71218764 + L1MB7 LINE L1 1217 2111 -5223 5 1313 188 100 25 0 chrX 95431841 95431881 -71218415 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 5 1313 272 304 0 9 chrX 95432055 95432171 -71218125 - L1_Rod LINE L1 -15 5832 5718 5 1313 384 256 85 68 chrX 95432355 95432531 -71217765 + L1MB7 LINE L1 2661 2839 -4495 5 1313 259 241 0 0 chrX 95432616 95432674 -71217622 - PB1D9 SINE Alu -7 113 56 5 1313 652 60 0 0 chrX 95432863 95432947 -71217349 + B1_Mus2 SINE Alu 61 144 -3 5 1313 216 86 0 0 chrX 95432947 95432982 -71217314 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 5 1313 294 281 35 0 chrX 95433507 95433621 -71216675 + L1MB7 LINE L1 6537 6654 -390 5 1313 999 281 40 3 chrX 95433635 95433960 -71216336 + L1MB7 LINE L1 6698 7034 -10 5 1313 326 149 46 0 chrX 95434116 95434203 -71216093 + (TA)n Simple_repeat Simple_repeat 2 92 0 5 1313 332 323 101 42 chrX 95435123 95435291 -71215005 + MIRb SINE MIR 4 181 -87 5 1313 303 354 44 0 chrX 95435358 95435471 -71214825 + L2a LINE L2 3309 3426 0 5 1313 244 261 234 21 chrX 95435758 95435852 -71214444 - MIR SINE MIR -67 141 28 5 1313 191 300 7 84 chrX 95436645 95436787 -71213509 - L2b LINE L2 -219 3156 3026 5 1313 215 330 87 26 chrX 95436934 95437049 -71213247 + MER5A DNA MER1_type 44 165 -24 5 1313 25 0 0 0 chrX 95437124 95437149 -71213147 + AT_rich Low_complexity Low_complexity 1 25 0 5 1313 504 263 92 49 chrX 95437412 95437596 -71212700 + MIRb SINE MIR 5 198 -70 5 1313 252 277 0 35 chrX 95438298 95438384 -71211912 - MIRb SINE MIR -46 222 140 5 1313 981 82 7 0 chrX 95438386 95438533 -71211763 + L1Md_F2 LINE L1 6433 6580 -2 5 1313 1332 64 53 5 chrX 95438748 95438937 -71211359 + L1Md_F2 LINE L1 6373 6570 -12 5 1313 184 359 118 14 chrX 95439372 95439516 -71210780 + MER5B DNA MER1_type 20 178 0 5 1313 1598 246 53 15 chrX 95439615 95440008 -71210288 - MTD LTR MaLR -8 411 4 5 1313 266 143 18 0 chrX 95440011 95440067 -71210229 + Lx3_Mus LINE L1 6929 6985 -24 5 1313 297 0 0 0 chrX 95440067 95440100 -71210196 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 5 1313 311 340 146 18 chrX 95440143 95440308 -71209988 + MIR SINE MIR 64 249 -13 5 1313 218 335 48 61 chrX 95440914 95440929 -71209367 + MIRm SINE MIR 114 144 -132 5 1313 247 337 0 33 chrX 95440929 95441021 -71209275 + L2c LINE L2 3259 3347 -40 5 1313 218 335 48 61 chrX 95441021 95441079 -71209217 + MIRm SINE MIR 145 276 0 5 1313 357 346 59 15 chrX 95441175 95441310 -71208986 + L1M4 LINE L1 17 157 -6385 5 1313 406 288 35 0 chrX 95441341 95441511 -71208785 + L1M4 LINE L1 3308 3483 -3161 5 1313 327 230 81 0 chrX 95441587 95441661 -71208635 + 4.5SRNA scRNA scRNA 6 85 -9 5 1313 363 140 0 0 chrX 95441666 95441723 -71208573 + ID4 SINE ID 2 58 -25 5 1313 936 274 0 9 chrX 95441754 95441971 -71208325 - B3 SINE B2 0 216 2 5 1313 258 303 38 50 chrX 95442143 95442223 -71208073 + ID4_ SINE ID 5 83 0 5 1313 1579 280 41 28 chrX 95442234 95442921 -71207375 + L1M4 LINE L1 4371 5066 -1578 5 1313 387 256 11 0 chrX 95443070 95443160 -71207136 + L1M4 LINE L1 5096 5186 -1458 5 1313 22 35 0 0 chrX 95443302 95443331 -71206965 + AT_rich Low_complexity Low_complexity 1 29 0 5 1313 236 283 0 16 chrX 95443418 95443479 -71206817 + L2a LINE L2 3299 3358 -68 5 1313 475 266 77 0 chrX 95443741 95443906 -71206390 - L1M5 LINE L1 -343 5821 5646 5 1313 21 0 0 0 chrX 95444303 95444324 -71205972 + AT_rich Low_complexity Low_complexity 1 21 0 5 1313 231 146 0 0 chrX 95444976 95445017 -71205279 + (TTTTC)n Simple_repeat Simple_repeat 4 44 0 5 1313 21 0 0 0 chrX 95445527 95445548 -71204748 + AT_rich Low_complexity Low_complexity 1 21 0 5 1313 3872 52 0 4 chrX 95445867 95446353 -71203943 - L1Md_F2 LINE L1 -12 6570 6087 5 1313 24 0 0 0 chrX 95449356 95449380 -71200916 + AT_rich Low_complexity Low_complexity 1 24 0 5 1313 258 266 44 9 chrX 95449399 95449513 -71200783 - Lx9 LINE L1 -128 7516 7399 5 1313 524 254 154 8 chrX 95449518 95449641 -71200655 + B1_Mur2 SINE Alu 2 142 -7 5 1313 320 305 192 0 chrX 95449690 95449771 -71200525 - Lx9 LINE L1 -44 7600 7507 5 1313 189 74 0 0 chrX 95449771 95449798 -71200498 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 5 1313 320 305 192 0 chrX 95449798 95449919 -71200377 - Lx9 LINE L1 -138 7506 7360 5 1313 1072 289 132 0 chrX 95449919 95450244 -71200052 - Lx9 LINE L1 -890 6754 6387 5 1313 426 324 18 0 chrX 95450395 95450506 -71199790 + B1_Mur1 SINE Alu 28 140 -9 5 1313 200 143 0 28 chrX 95450510 95450546 -71199750 + (TAA)n Simple_repeat Simple_repeat 1 35 0 5 1313 22 35 0 0 chrX 95450656 95450685 -71199611 + AT_rich Low_complexity Low_complexity 1 29 0 5 1313 454 299 18 82 chrX 95451588 95451759 -71198537 + B3A SINE B2 1 160 -38 5 1313 226 295 106 15 chrX 95452071 95452206 -71198090 + MIRb SINE MIR 81 216 -46 5 1313 831 284 78 51 chrX 95452790 95453121 -71197175 - MER58B DNA MER1_type -1 340 1 5 1313 260 250 19 111 chrX 95454317 95454425 -71195871 + ID_B1 SINE B4 81 178 -46 5 1313 403 323 0 31 chrX 95454329 95454457 -71195839 + B1F SINE Alu 9 132 -17 5 1313 226 342 0 90 chrX 95455708 95455830 -71194466 - MIR3 SINE MIR -29 179 69 5 1313 267 214 167 33 chrX 95456001 95456151 -71194145 - Lx8 LINE L1 -2 7471 7302 5 1313 209 344 133 0 chrX 95456573 95456663 -71193633 - MIR SINE MIR -79 183 82 5 1313 223 278 90 30 chrX 95457136 95457236 -71193060 + MIR3 SINE MIR 65 170 -38 5 1313 414 0 0 0 chrX 95457245 95457291 -71193005 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1313 390 21 0 0 chrX 95457291 95457337 -71192959 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1313 23 33 0 0 chrX 95457368 95457398 -71192898 + AT_rich Low_complexity Low_complexity 1 30 0 5 1313 260 363 11 0 chrX 95457447 95457538 -71192758 + MIRb SINE MIR 37 128 -140 5 1313 360 0 0 0 chrX 95457892 95457932 -71192364 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1313 674 12 12 0 chrX 95457937 95458020 -71192276 + (TCTA)n Simple_repeat Simple_repeat 3 86 0 5 1313 414 278 37 0 chrX 95459369 95459477 -71190819 - Tigger5 DNA MER2_type -2157 249 138 5 1313 231 364 10 20 chrX 95459498 95459599 -71190697 + MIRb SINE MIR 132 231 -37 5 1313 2444 179 12 19 chrX 95459960 95460376 -71189920 - MTC LTR MaLR -8 413 1 5 1313 263 226 44 77 chrX 95460525 95460616 -71189680 - MIR SINE MIR -62 200 113 5 1313 185 275 0 0 chrX 95460664 95460704 -71189592 - L2b LINE L2 -28 3347 3308 5 1313 2484 68 108 0 chrX 95461629 95461998 -71188298 - BGLII LTR ERVK -12 409 1 5 1313 493 280 62 53 chrX 95463186 95463412 -71186884 - RMER15 LTR ERVL -5 570 343 5 1313 900 47 8 0 chrX 95463553 95463680 -71186616 + L1Md_F3 LINE L1 6457 6584 0 5 1313 1203 185 23 5 chrX 95463685 95463902 -71186394 + URR1A DNA MER1_type 6 226 0 5 1313 190 292 240 8 chrX 95464659 95464780 -71185516 + MIRc SINE MIR 104 252 -16 5 1313 414 0 0 0 chrX 95465100 95465146 -71185150 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1313 1960 262 71 35 chrX 95466752 95467952 -71182344 - L1MB7 LINE L1 -20 6164 4915 5 1313 2057 271 101 8 chrX 95467969 95468849 -71181447 - L1_Mur3 LINE L1 -1249 4631 3670 5 1313 1721 236 41 13 chrX 95468854 95469248 -71181048 - MTD LTR MaLR 0 419 15 5 1313 1307 72 0 6 chrX 95469249 95469430 -71180866 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 1313 1067 15 23 0 chrX 95469432 95469563 -71180733 + (GGAGAA)n Simple_repeat Simple_repeat 6 139 0 5 1313 869 222 22 98 chrX 95469564 95469879 -71180417 - MTC-int LTR MaLR 0 1258 968 5 1313 1150 236 123 107 chrX 95469871 95470050 -71180246 - MTD LTR MaLR -35 384 205 5 1313 3748 29 0 2 chrX 95470050 95470495 -71179801 - L1Md_T LINE L1 -1 6581 6138 5 1313 1150 236 123 107 chrX 95470495 95470681 -71179615 - MTD LTR MaLR -215 204 13 5 1313 752 239 192 49 chrX 95470810 95471324 -71178972 - L1_Mur3 LINE L1 -2300 3580 3038 5 1313 699 262 0 0 chrX 95471423 95471564 -71178732 - B1_Mm SINE Alu -6 141 1 5 1313 618 286 76 11 chrX 95472051 95472405 -71177891 - L1MB7 LINE L1 -2368 3778 3402 5 1313 278 285 25 31 chrX 95473104 95473267 -71177029 - L1MA4 LINE L1 -83 6217 6056 5 1313 417 322 6 22 chrX 95474650 95474828 -71175468 + CT-rich Low_complexity Low_complexity 1 175 0 5 1313 222 350 23 70 chrX 95475289 95475418 -71174878 - MIR SINE MIR -118 144 22 5 1313 7976 70 7 76 chrX 95476258 95478054 -71172242 - L1_Mus2 LINE L1 -260 6306 4668 5 1313 1215 34 0 7 chrX 95478088 95478236 -71172060 + B1_Mm SINE Alu 1 147 0 5 1313 785 133 0 7 chrX 95478242 95478378 -71171918 + (GAAA)n Simple_repeat Simple_repeat 2 136 0 5 1313 334 249 36 0 chrX 95478380 95478502 -71171794 + L1MA4 LINE L1 5816 5931 -369 6 1313 706 270 136 13 chrX 95480245 95480628 -71169668 + L1M2 LINE L1 3696 4125 -2018 6 1313 1181 48 7 7 chrX 95480891 95481038 -71169258 - B1_Mm SINE Alu 0 147 1 6 1313 1116 59 0 0 chrX 95483599 95483734 -71166562 - B1_Mm SINE Alu -10 137 3 6 1313 296 304 2 0 chrX 95484166 95484246 -71166050 - ID4_ SINE ID -61 91 11 6 1313 25 0 0 0 chrX 95484638 95484663 -71165633 + AT_rich Low_complexity Low_complexity 1 25 0 6 1313 1214 55 0 18 chrX 95484666 95484834 -71165462 - L1Md_F2 LINE L1 -14 6568 6404 6 1313 213 39 0 0 chrX 95485896 95485922 -71164374 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1313 346 302 82 25 chrX 95486206 95486328 -71163968 + B1F1 SINE Alu 21 149 0 6 1313 631 327 0 0 chrX 95486820 95486973 -71163323 + RSINE1 SINE B4 11 163 -2 6 1313 210 276 17 0 chrX 95486976 95487034 -71163262 + (CATA)n Simple_repeat Simple_repeat 2 60 0 6 1313 495 250 0 28 chrX 95488392 95488499 -71161797 + PB1D10 SINE Alu 13 116 -1 6 1313 285 98 0 0 chrX 95488540 95488581 -71161715 + (TAA)n Simple_repeat Simple_repeat 2 42 0 6 1313 1895 170 73 0 chrX 95488685 95489027 -71161269 - ORR1B2 LTR MaLR 0 367 1 6 1313 268 316 33 119 chrX 95489313 95489464 -71160832 + MIRb SINE MIR 17 154 -114 6 1313 525 32 0 0 chrX 95489722 95489785 -71160511 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 1313 21 0 0 0 chrX 95490216 95490237 -71160059 + AT_rich Low_complexity Low_complexity 1 21 0 6 1313 646 201 7 44 chrX 95490271 95490406 -71159890 - B3 SINE B2 -85 131 2 6 1313 477 0 0 0 chrX 95491594 95491647 -71158649 + (A)n Simple_repeat Simple_repeat 1 53 0 6 1313 244 263 150 10 chrX 95493438 95493538 -71156758 + MIR SINE MIR 33 146 -62 6 1313 22 0 0 0 chrX 95494343 95494365 -71155931 + AT_rich Low_complexity Low_complexity 1 22 0 6 1313 349 319 82 12 chrX 95494477 95494648 -71155648 - MIR SINE MIR -74 188 6 6 1313 558 79 0 0 chrX 95494662 95494738 -71155558 + (TA)n Simple_repeat Simple_repeat 2 77 0 6 1313 1147 255 3 20 chrX 95495038 95495330 -71154966 + Lx8 LINE L1 6959 7245 -228 6 1313 478 327 0 7 chrX 95495438 95495589 -71154707 - MLT1E3 LTR MaLR -472 152 3 6 1313 412 328 62 0 chrX 95496865 95497042 -71153254 + MER3 DNA MER1_type 3 190 -19 6 1313 208 248 30 18 chrX 95497127 95497210 -71153086 + MIRm SINE MIR 32 116 -92 6 1313 192 259 19 0 chrX 95497448 95497502 -71152794 + MIR3 SINE MIR 150 204 -4 6 1313 22 0 0 0 chrX 95498339 95498361 -71151935 + AT_rich Low_complexity Low_complexity 1 22 0 6 1313 630 60 0 0 chrX 95498517 95498600 -71151696 + (TG)n Simple_repeat Simple_repeat 1 83 0 6 1313 411 318 47 8 chrX 95499134 95499261 -71151035 + B1F SINE Alu 7 138 -11 6 1313 1461 48 0 36 chrX 95499621 95499814 -71150482 + B2_Mm1t SINE B2 2 187 -6 6 1313 375 60 0 0 chrX 95500436 95500486 -71149810 + (TTA)n Simple_repeat Simple_repeat 2 51 0 1 1313 302 340 73 73 chrX 95501238 95501403 -71148893 + MIR3 SINE MIR 17 181 -27 2 1313 196 311 33 0 chrX 95501813 95501874 -71148422 + L3 LINE CR1 4423 4485 -4 3 1313 420 37 0 0 chrX 95502110 95502164 -71148132 + (CAGA)n Simple_repeat Simple_repeat 2 55 0 4 1313 333 327 51 24 chrX 95504607 95504742 -71145554 + MIRm SINE MIR 33 170 -98 5 1313 433 309 39 7 chrX 95505879 95506032 -71144264 + MIR SINE MIR 66 223 -39 6 1313 305 308 61 96 chrX 95507011 95507126 -71143170 + B1F2 SINE Alu 27 137 -12 7 1313 266 236 42 0 chrX 95507135 95507207 -71143089 + GA-rich Low_complexity Low_complexity 2 76 0 8 1313 264 298 170 37 chrX 95507927 95508115 -71142181 - MER20B DNA MER1_type -5 214 2 9 1313 289 204 8 8 chrX 95509132 95509265 -71141031 + CT-rich Low_complexity Low_complexity 1 133 0 1 1313 468 0 0 0 chrX 95509265 95509317 -71140979 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1313 261 0 0 0 chrX 95509317 95509345 -71140951 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 1313 450 0 0 0 chrX 95511885 95511935 -71138361 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1313 245 81 31 31 chrX 95512644 95512708 -71137588 + (CAAAAA)n Simple_repeat Simple_repeat 2 65 0 1 1313 180 0 0 0 chrX 95514558 95514578 -71135718 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1313 291 93 0 0 chrX 95515107 95515150 -71135146 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 1 1313 312 91 0 0 chrX 95515696 95515740 -71134556 + (A)n Simple_repeat Simple_repeat 1 44 0 1 1313 258 271 127 63 chrX 95521779 95522000 -71128296 - MIRc SINE MIR 0 268 34 1 1313 534 67 34 0 chrX 95523193 95523282 -71127014 - L1Md_F2 LINE L1 0 6582 6491 1 1313 411 21 0 0 chrX 95524343 95524391 -71125905 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1313 792 113 35 7 chrX 95524637 95524780 -71125516 + Lx2 LINE L1 6850 6996 -1 2 1313 349 292 181 28 chrX 95526417 95526826 -71123470 + L1_Mur3 LINE L1 1480 1979 -3868 2 1313 495 0 0 0 chrX 95526826 95526881 -71123415 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 1313 324 290 195 28 chrX 95526881 95527115 -71123181 + L1_Mur3 LINE L1 1980 2227 -3620 2 1313 3799 39 0 4 chrX 95527216 95527677 -71122619 + L1Md_F3 LINE L1 6126 6584 0 2 1313 267 206 56 9 chrX 95527721 95527829 -71122467 + Lx9 LINE L1 7405 7517 -127 2 1313 306 0 0 0 chrX 95527920 95527954 -71122342 + (TC)n Simple_repeat Simple_repeat 2 35 0 2 1313 243 0 0 0 chrX 95527954 95527980 -71122316 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1313 489 283 53 21 chrX 95528092 95528374 -71121922 - L1M4 LINE L1 -412 5766 5476 2 1313 587 248 0 34 chrX 95528806 95528923 -71121373 - B1F SINE Alu -36 113 1 2 1313 489 286 84 30 chrX 95528924 95529585 -71120711 - L1M4 LINE L1 -748 5426 4715 2 1313 741 259 19 8 chrX 95529622 95529879 -71120417 - L1M4 LINE L1 -1495 4651 4392 2 1313 538 261 51 47 chrX 95529882 95530139 -71120157 - L1MC5 LINE L1 -539 7422 7165 3 1313 225 298 0 0 chrX 95530146 95530193 -71120103 + B1F1 SINE Alu 4 50 -99 3 1313 851 315 21 83 chrX 95530263 95530588 -71119708 - MTEa LTR MaLR 0 379 75 3 1313 4127 196 36 8 chrX 95530662 95531525 -71118771 - Lx4B LINE L1 -5 7053 6167 3 1313 2148 131 15 10 chrX 95531540 95531932 -71118364 + L1_Mur2 LINE L1 4969 5362 -515 3 1313 1995 125 9 9 chrX 95531934 95532281 -71118015 + Lx LINE L1 6244 6590 -64 3 1313 1456 237 89 116 chrX 95532293 95533053 -71117243 - RMER17B LTR ERVK -47 762 1 3 1313 292 158 26 26 chrX 95533060 95533138 -71117158 + Lx2 LINE L1 6919 6996 -1 3 1313 1686 174 120 33 chrX 95533145 95533537 -71116759 + Lx LINE L1 5351 5776 -101 3 1313 2435 99 0 22 chrX 95533550 95533920 -71116376 - L1_Mus4 LINE L1 -5 6631 6270 3 1313 2285 137 142 7 chrX 95533920 95534369 -71115927 - L1Md_F3 LINE L1 -3 6581 6072 4 1313 2416 144 11 51 chrX 95534379 95534655 -71115641 + L1_Mm LINE L1 4480 4736 -1147 4 1313 189 74 0 0 chrX 95534655 95534682 -71115614 + (CAA)n Simple_repeat Simple_repeat 2 28 0 4 1313 2416 144 11 51 chrX 95534682 95534879 -71115417 + L1_Mm LINE L1 4737 4933 -950 4 1313 1990 126 24 14 chrX 95534877 95535246 -71115050 + Lx LINE L1 5772 6144 -914 3 1313 2351 99 19 38 chrX 95536033 95536399 -71113897 + Lx LINE L1 6288 6646 -8 3 1313 39 0 0 0 chrX 95536506 95536545 -71113751 + AT_rich Low_complexity Low_complexity 1 39 0 4 1313 320 298 26 0 chrX 95537242 95537356 -71112940 + CT-rich Low_complexity Low_complexity 4 120 0 4 1313 1270 70 5 66 chrX 95537667 95537865 -71112431 + B2_Mm2 SINE B2 2 187 -8 4 1313 761 69 0 0 chrX 95537948 95538064 -71112232 - L1Md_F2 LINE L1 -2 6580 6465 4 1313 266 343 74 0 chrX 95540778 95540886 -71109410 + MIRb SINE MIR 43 158 -110 4 1313 3096 52 3 0 chrX 95540915 95541297 -71108999 - L1Md_F2 LINE L1 -3 6579 6197 4 1313 573 291 52 52 chrX 95541392 95541584 -71108712 + B3A SINE B2 5 196 -2 4 1313 382 324 155 0 chrX 95543954 95544096 -71106200 - RSINE1 SINE B4 0 165 2 5 1313 421 192 0 0 chrX 95544476 95544549 -71105747 + B3A SINE B2 2 74 -124 5 1313 728 323 67 33 chrX 95545257 95545616 -71104680 - MER119 DNA MER1_type -1 582 212 5 1313 724 192 243 0 chrX 95545712 95545889 -71104407 - ID_B1 SINE B4 -3 221 2 5 1313 511 363 6 6 chrX 95546305 95546463 -71103833 - MER119 DNA MER1_type -395 188 31 5 1313 304 337 121 12 chrX 95546706 95546871 -71103425 + L1M5 LINE L1 5473 5655 -469 5 1313 948 258 0 5 chrX 95546873 95547083 -71103213 - B3 SINE B2 -6 210 2 5 1313 204 312 42 31 chrX 95547614 95547710 -71102586 + MIRb SINE MIR 61 157 -111 5 1313 427 344 30 66 chrX 95547773 95548084 -71102212 + B4 SINE B4 3 274 -18 5 1313 1642 302 30 37 chrX 95548211 95548813 -71101483 - Lx7 LINE L1 -423 7273 6671 5 1313 984 174 158 5 chrX 95548813 95549009 -71101287 - URR1A DNA MER1_type 0 226 1 5 1313 1642 302 30 37 chrX 95549009 95549050 -71101246 - Lx7 LINE L1 -1026 6670 6635 5 1313 691 183 49 16 chrX 95549094 95549277 -71101019 - Lx5 LINE L1 0 7050 6862 6 1313 2772 155 28 0 chrX 95549281 95549975 -71100321 - Lx5 LINE L1 -951 6099 5377 6 164 186 326 0 0 chrX 95551459 95551508 -71098788 + MIR SINE MIR 37 85 -177 6 1314 196 281 31 15 chrX 95551524 95551589 -71098707 + MIR SINE MIR 120 185 -77 6 1314 181 366 109 39 chrX 95551939 95552067 -71098229 + L3 LINE CR1 4176 4312 -177 6 1314 185 347 50 30 chrX 95552232 95552333 -71097963 + MER5A DNA MER1_type 1 103 -86 6 1314 648 0 0 0 chrX 95552340 95552412 -71097884 + (GA)n Simple_repeat Simple_repeat 1 72 0 6 1314 248 349 54 27 chrX 95552630 95552742 -71097554 - L2b LINE L2 -19 3356 3242 6 1314 405 0 0 0 chrX 95554047 95554092 -71096204 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1314 378 0 0 0 chrX 95554092 95554133 -71096163 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1314 445 244 31 16 chrX 95554445 95554574 -71095722 - Lx9 LINE L1 -594 7050 6920 6 1314 22 0 0 0 chrX 95554693 95554715 -71095581 + AT_rich Low_complexity Low_complexity 1 22 0 6 1314 216 254 0 0 chrX 95554831 95554902 -71095394 + A-rich Low_complexity Low_complexity 5 75 0 7 1314 27 49 0 0 chrX 95555000 95555041 -71095255 + AT_rich Low_complexity Low_complexity 1 41 0 7 1314 272 289 0 0 chrX 95555292 95555375 -71094921 - ERVL-int LTR ERVL -1784 3973 3891 7 1314 315 261 138 103 chrX 95557410 95557555 -71092741 + B3A SINE B2 1 150 -45 7 1314 23531 13 0 0 chrX 95557923 95560636 -71089660 + L1Md_A LINE L1 2874 5586 -297 7 1314 8827 13 0 0 chrX 95560636 95561631 -71088665 + L1Md_A LINE L1 5587 6581 -1 7 1314 276 370 12 12 chrX 95561871 95562038 -71088258 - Lx8 LINE L1 -222 7422 7130 7 1314 188 275 0 0 chrX 95562389 95562429 -71087867 - MIRc SINE MIR -135 133 94 7 1314 238 377 84 44 chrX 95562773 95562998 -71087298 + ORR1E LTR MaLR 21 254 -105 7 1314 289 208 0 27 chrX 95563233 95563307 -71086989 - MER33 DNA MER1_type -91 233 162 7 1314 22 56 0 0 chrX 95563328 95563364 -71086932 + AT_rich Low_complexity Low_complexity 1 36 0 7 1314 465 62 0 0 chrX 95563444 95563509 -71086787 + (TC)n Simple_repeat Simple_repeat 1 65 0 8 1314 22 0 0 0 chrX 95563772 95563794 -71086502 + AT_rich Low_complexity Low_complexity 1 22 0 8 1314 325 304 19 39 chrX 95564113 95564267 -71086029 + MIRb SINE MIR 102 252 -16 8 1314 1139 154 48 5 chrX 95564815 95565024 -71085272 + URR1A DNA MER1_type 8 225 -1 8 1314 8566 253 73 31 chrX 95565098 95565893 -71084403 - Lx9 LINE L1 -1596 6048 5201 8 1314 288 0 0 0 chrX 95565893 95565925 -71084371 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 1314 8566 242 83 35 chrX 95565925 95568440 -71081856 - Lx9 LINE L1 -647 5200 2552 8 1314 3431 249 68 10 chrX 95568447 95569605 -71080691 - Lx9 LINE L1 -3495 2352 1130 8 1314 381 22 0 0 chrX 95569611 95569657 -71080639 + (TG)n Simple_repeat Simple_repeat 1 46 0 8 1314 2479 220 33 60 chrX 95569659 95570355 -71079941 + Lx9 LINE L1 6948 7624 -20 8 1314 616 281 9 121 chrX 95570413 95570636 -71079660 + B3A SINE B2 1 198 0 8 1314 808 362 94 20 chrX 95571221 95571923 -71078373 + L3 LINE CR1 3619 4372 -117 8 1314 252 357 49 67 chrX 95572895 95573120 -71077176 - L2a LINE L2 -3 3423 3203 9 1314 375 281 0 0 chrX 95573124 95573206 -71077090 + PB1D10 SINE Alu 14 95 -22 9 1314 304 392 0 0 chrX 95573206 95573226 -71077070 + ID_B1 SINE B4 95 196 -28 9 1314 2843 32 0 0 chrX 95573475 95573814 -71076482 + L1Md_A LINE L1 6242 6580 -2 9 1314 1183 285 42 81 chrX 95573938 95574127 -71076169 + MTEa LTR MaLR 13 198 -181 9 1314 423 0 0 0 chrX 95574127 95574174 -71076122 + (TC)n Simple_repeat Simple_repeat 2 48 0 9 1314 1183 285 42 81 chrX 95574174 95574366 -71075930 + MTEa LTR MaLR 199 378 -1 9 1314 2366 110 0 9 chrX 95574367 95574697 -71075599 + ORR1A2 LTR MaLR 1 327 0 9 1314 182 328 15 15 chrX 95574798 95574866 -71075430 + MIR3 SINE MIR 128 195 -13 9 1314 23 33 0 0 chrX 95574921 95574951 -71075345 + AT_rich Low_complexity Low_complexity 1 30 0 9 1314 486 149 0 0 chrX 95575201 95575288 -71075008 + (CA)n Simple_repeat Simple_repeat 2 88 0 9 1314 246 239 84 0 chrX 95575452 95575523 -71074773 + MIR SINE MIR 47 123 -85 1 1314 243 170 37 19 chrX 95575547 95575601 -71074695 - Charlie24 DNA MER1_type -6 2444 2390 1 1314 381 384 44 0 chrX 95576823 95576982 -71073314 - MLT1L LTR MaLR -237 373 208 1 1314 201 74 0 0 chrX 95577016 95577043 -71073253 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1314 380 357 84 58 chrX 95577069 95577343 -71072953 - MLT1J LTR MaLR -95 417 137 1 1314 608 351 14 19 chrX 95577460 95577675 -71072621 + MER20 DNA MER1_type 6 219 0 1 1314 189 367 78 26 chrX 95577780 95578012 -71072284 + L2 LINE L2 2819 3062 -357 1 1314 233 217 67 78 chrX 95578168 95578258 -71072038 - MTEb LTR MaLR -7 372 284 1 1314 353 250 27 63 chrX 95578478 95578589 -71071707 - MLT1J LTR MaLR -299 109 3 1 1314 964 137 0 0 chrX 95578650 95578796 -71071500 + B1_Mus1 SINE Alu 3 148 0 1 1314 862 67 0 0 chrX 95578836 95578955 -71071341 + B1_Mus2 SINE Alu 29 147 0 1 1314 1977 166 76 0 chrX 95579693 95580060 -71070236 - L1_Mur2 LINE L1 -3156 2721 2327 1 1314 710 69 0 10 chrX 95580163 95580265 -71070031 + (GGA)n Simple_repeat Simple_repeat 1 101 0 1 1314 838 259 6 11 chrX 95580265 95580445 -71069851 + B3A SINE B2 5 183 -15 1 1314 459 186 0 0 chrX 95580510 95580607 -71069689 + T-rich Low_complexity Low_complexity 3 99 0 1 1314 417 20 0 0 chrX 95581040 95581090 -71069206 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1314 1315 296 77 80 chrX 95581109 95581657 -71068639 - RMER15 LTR ERVL -3 572 27 1 1314 614 308 15 12 chrX 95581693 95581890 -71068406 - B3A SINE B2 -5 211 11 1 1314 1084 208 41 64 chrX 95581924 95582078 -71068218 - Lx7 LINE L1 0 7696 7538 1 1314 1059 142 0 0 chrX 95582078 95582254 -71068042 + (GGAGA)n Simple_repeat Simple_repeat 5 180 0 1 1314 1084 208 41 64 chrX 95582254 95582413 -71067883 - Lx7 LINE L1 -159 7537 7391 1 1314 243 0 0 0 chrX 95582414 95582441 -71067855 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1314 2237 227 31 19 chrX 95582509 95583026 -71067270 - Lx7 LINE L1 -329 7367 6845 1 1314 687 149 0 187 chrX 95583030 95583212 -71067084 + Lx6 LINE L1 6654 6801 -659 1 1314 1034 144 0 6 chrX 95584649 95584830 -71065466 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 1314 245 277 48 97 chrX 95585570 95585694 -71064602 - L2c LINE L2 0 3387 3270 1 1314 335 298 100 12 chrX 95585903 95586063 -71064233 - MIR SINE MIR -1 261 88 1 1314 204 40 0 0 chrX 95586801 95586826 -71063470 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 1314 297 0 0 0 chrX 95587101 95587134 -71063162 + (GA)n Simple_repeat Simple_repeat 1 33 0 1 1314 396 266 25 0 chrX 95587135 95587214 -71063082 - ID_B1 SINE B4 -63 161 81 1 1314 384 342 94 102 chrX 95587284 95587678 -71062618 + MLT1J LTR MaLR 122 512 0 1 1314 294 29 0 0 chrX 95588108 95588143 -71062153 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 1 1314 5120 128 56 2 chrX 95588143 95588934 -71061362 - Lx4A LINE L1 -3 7055 6223 1 1314 2791 86 2 139 chrX 95589004 95589506 -71060790 - RLTR10C LTR ERVK -3 433 1 1 1314 23 0 0 0 chrX 95589752 95589775 -71060521 + AT_rich Low_complexity Low_complexity 1 23 0 1 1314 3287 256 81 93 chrX 95589892 95591317 -71058979 - Lx7 LINE L1 -1333 6363 4918 1 1314 5996 67 4 6 chrX 95591317 95592097 -71058199 - Lx3_Mus LINE L1 -9 7000 6223 1 1314 396 0 0 0 chrX 95592097 95592141 -71058155 + (ATTG)n Simple_repeat Simple_repeat 2 45 0 1 1314 3287 249 95 129 chrX 95592141 95592882 -71057414 - Lx7 LINE L1 -963 4917 4229 1 1314 1849 192 5 5 chrX 95592906 95593273 -71057023 - Lx7 LINE L1 -3392 2488 2122 1 1314 6048 67 0 8 chrX 95593293 95594078 -71056218 - L1_Mus2 LINE L1 -2 6564 5786 1 1314 3387 82 0 0 chrX 95594078 95594517 -71055779 + L1_Mus2 LINE L1 5367 5805 -78 1 1314 2411 249 30 11 chrX 95594608 95595303 -71054993 - Lx7 LINE L1 -3847 2033 1326 1 1314 276 120 0 0 chrX 95595799 95595849 -71054447 + (T)n Simple_repeat Simple_repeat 1 50 0 1 1314 8354 46 14 0 chrX 95595880 95597594 -71052702 - L1Md_F2 LINE L1 -12 6570 4840 1 1314 659 293 43 66 chrX 95597662 95598100 -71052196 - Lx7 LINE L1 -6436 1292 865 1 1314 23 54 0 0 chrX 95598286 95598323 -71051973 + AT_rich Low_complexity Low_complexity 1 37 0 1 1314 241 364 72 9 chrX 95598581 95598692 -71051604 - RSINE1 SINE B4 0 165 48 1 1314 30 45 0 0 chrX 95599170 95599214 -71051082 + AT_rich Low_complexity Low_complexity 1 44 0 1 1314 635 240 28 22 chrX 95599219 95599398 -71050898 - B3A SINE B2 -16 182 3 1 1314 276 337 105 47 chrX 95599409 95599545 -71050751 + Tigger5 DNA MER2_type 38 177 -2229 1 1314 2593 173 51 50 chrX 95599545 95600129 -71050167 + RMER4B LTR ERVK 1 585 0 1 1314 276 337 105 47 chrX 95600129 95600182 -71050114 + Tigger5 DNA MER2_type 178 238 -2168 1 1314 5839 217 21 65 chrX 95600207 95600246 -71050050 + Lx7 LINE L1 6311 6342 -1354 1 1314 1447 161 67 0 chrX 95600246 95600531 -71049765 - Lx2 LINE L1 0 6997 6694 1 1314 5839 217 21 65 chrX 95600531 95601935 -71048361 + Lx7 LINE L1 6343 7691 -5 1 1314 449 313 54 34 chrX 95602497 95602702 -71047594 + MIRc SINE MIR 29 237 -31 1 1314 669 319 0 0 chrX 95602705 95602868 -71047428 + RSINE1 SINE B4 3 165 0 1 1314 201 147 0 0 chrX 95602868 95602902 -71047394 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1314 313 360 39 10 chrX 95603466 95603601 -71046695 - LTR33C LTR ERVL -278 225 30 1 1314 2096 155 86 8 chrX 95603695 95604078 -71046218 + MTC LTR MaLR 1 413 -8 1 1314 486 0 0 0 chrX 95604220 95604274 -71046022 + (TTTC)n Simple_repeat Simple_repeat 2 55 0 1 1314 261 331 101 27 chrX 95606204 95606353 -71043943 - MIRc SINE MIR -87 181 22 1 1314 204 67 0 0 chrX 95606564 95606594 -71043702 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1314 3335 37 2 12 chrX 95606597 95606608 -71043688 + L1Md_F2 LINE L1 5681 5688 -894 1 1314 3971 47 0 4 chrX 95606608 95607097 -71043199 - L1Md_F2 LINE L1 -1 6581 6095 1 1314 3335 42 5 13 chrX 95607097 95607513 -71042783 + L1Md_F2 LINE L1 5689 6447 -550 1 1314 222 167 0 40 chrX 95607979 95608029 -71042267 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 1 1314 1049 300 48 45 chrX 95608040 95608396 -71041900 - MLT2D LTR ERVL -57 357 1 1 1314 395 294 52 33 chrX 95608406 95608617 -71041679 - ERVL-int LTR ERVL -11 5746 5532 1 1314 820 311 95 36 chrX 95608689 95609162 -71041134 - ERVL-int LTR ERVL -1505 4252 3752 1 1314 510 239 51 0 chrX 95609208 95609325 -71040971 - ERVL-int LTR ERVL -2704 3010 2888 1 1314 918 298 46 42 chrX 95609353 95609811 -71040485 - ERVL-int LTR ERVL -2893 2864 2405 1 1314 318 384 60 23 chrX 95610004 95610305 -71039991 + L1MDa LINE L1 673 984 -5649 1 1314 540 265 168 0 chrX 95610354 95610539 -71039757 - B3 SINE B2 0 216 1 1 1314 1933 263 76 24 chrX 95610540 95610848 -71039448 + Lx8 LINE L1 5205 5543 -337 1 1314 6737 50 1 2 chrX 95610848 95611682 -71038614 - L1Md_F2 LINE L1 -13 6569 5737 1 1314 1505 277 81 28 chrX 95611682 95612004 -71038292 + Lx8 LINE L1 5544 5868 -12 1 1314 230 98 93 56 chrX 95612017 95612071 -71038225 + Lx8 LINE L1 6146 6201 -1272 1 1314 382 335 69 26 chrX 95612079 95612300 -71037996 + Lx7 LINE L1 6916 7159 -314 1 1314 316 242 165 6 chrX 95612287 95612445 -71037851 + L1MDa LINE L1 1385 1567 -5066 1 1314 231 207 17 0 chrX 95612520 95612578 -71037718 + L1M2 LINE L1 4575 4633 -1510 1 1314 2912 175 31 13 chrX 95612596 95612899 -71037397 + RLTR20B2 LTR ERVK 1 305 -255 1 1314 228 35 0 0 chrX 95612899 95612928 -71037368 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1314 2912 175 31 13 chrX 95612928 95613174 -71037122 + RLTR20B2 LTR ERVK 306 559 -1 1 1314 1349 283 65 28 chrX 95613175 95613811 -71036485 + L1M2 LINE L1 4649 5307 -836 1 1314 293 320 148 6 chrX 95613836 95614012 -71036284 + L1M2 LINE L1 5504 5704 -596 1 1314 493 246 32 8 chrX 95614060 95614183 -71036113 + B3 SINE B2 2 127 -89 1 1314 857 307 53 19 chrX 95614669 95615084 -71035212 + L1M3 LINE L1 3846 4274 -1866 1 1314 706 273 81 34 chrX 95615412 95615499 -71034797 + L1_Rod LINE L1 1372 1471 -4376 1 1314 2561 141 12 120 chrX 95615499 95615999 -71034297 - RLTR41 LTR ERV1 0 446 1 1 1314 706 254 75 41 chrX 95615999 95616296 -71034000 + L1_Rod LINE L1 1472 1783 -4064 1 1314 3316 279 106 41 chrX 95616301 95617330 -71032966 - RMER1C Other Other -2 1340 235 1 1314 405 0 0 0 chrX 95617330 95617375 -71032921 + (CATA)n Simple_repeat Simple_repeat 1 45 0 1 1314 3316 316 64 65 chrX 95617375 95617665 -71032631 - RMER1C Other Other -1108 234 133 1 1314 403 273 40 52 chrX 95617675 95617851 -71032445 + L1_Rod LINE L1 1770 1936 -3944 1 1314 1052 252 46 38 chrX 95617873 95618219 -71032077 - L1M2 LINE L1 -514 5786 5438 1 1314 331 315 10 10 chrX 95618234 95618439 -71031857 - L1_Mur3 LINE L1 -2485 3395 3191 1 1314 4896 155 76 79 chrX 95618439 95619470 -71030826 - RLTR25B LTR ERVK 0 1028 1 1 1314 635 289 62 20 chrX 95619473 95619921 -71030375 - L1M2 LINE L1 -2925 3218 2752 1 1314 38644 40 2 3 chrX 95619915 95625877 -71024419 - L1Md_T LINE L1 -1 6581 670 1 1314 507 200 0 0 chrX 95625869 95625964 -71024332 - L1Md_T LINE L1 -6282 334 240 1 1314 1045 295 128 39 chrX 95625983 95626972 -71023324 - L1_Rod LINE L1 -3097 2750 1674 1 1314 402 74 0 0 chrX 95626972 95627026 -71023270 + (ACATG)n Simple_repeat Simple_repeat 5 58 0 1 1314 1251 125 51 177 chrX 95627033 95627344 -71022952 + RMER19B LTR ERVK 1 272 -630 1 1314 7391 76 14 3 chrX 95627368 95628793 -71021503 - L1_Mus1 LINE L1 0 6567 5120 1 1314 3016 182 78 10 chrX 95628796 95629383 -71020913 + RMER19B LTR ERVK 263 889 -13 1 1314 516 308 46 20 chrX 95629400 95629751 -71020545 - L1_Mur3 LINE L1 -4233 1647 1288 1 1314 21 0 0 0 chrX 95630072 95630093 -71020203 + AT_rich Low_complexity Low_complexity 1 21 0 1 1314 24 32 0 0 chrX 95630432 95630463 -71019833 + AT_rich Low_complexity Low_complexity 1 31 0 1 1314 30 59 0 0 chrX 95630655 95630706 -71019590 + AT_rich Low_complexity Low_complexity 1 51 0 1 1314 500 299 50 60 chrX 95630706 95630880 -71019416 + B3A SINE B2 2 180 -18 1 1314 315 0 0 0 chrX 95630880 95630915 -71019381 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1314 500 299 50 60 chrX 95630915 95630939 -71019357 + B3A SINE B2 181 198 0 1 1314 253 115 58 0 chrX 95631320 95631372 -71018924 - Lx4A LINE L1 -1 7057 7003 1 1314 770 320 101 23 chrX 95631461 95632164 -71018132 + L1M3 LINE L1 2110 2867 -3273 1 1314 285 277 94 78 chrX 95632282 95632474 -71017822 + Lx8 LINE L1 7277 7471 -2 1 1314 203 95 48 0 chrX 95632480 95632522 -71017774 + (TAAAA)n Simple_repeat Simple_repeat 5 48 0 1 1314 807 281 0 18 chrX 95633130 95633358 -71016938 + MERVL_2A-int LTR ERVL 2474 2697 -3017 1 1314 1459 313 26 66 chrX 95633363 95633910 -71016386 + MT2A LTR ERVL 9 533 0 1 1314 1610 251 72 24 chrX 95633910 95634367 -71015929 + MERVL_2A-int LTR ERVL 2799 3277 -2484 1 1314 3041 282 47 19 chrX 95634408 95635304 -71014992 + MERVL_2A-int LTR ERVL 3536 4456 -1305 1 1314 1032 261 39 135 chrX 95635320 95635683 -71014613 - MTE2a LTR MaLR 0 379 52 1 1314 31352 98 8 12 chrX 95635727 95641910 -71008386 - L1Md_F2 LINE L1 -12 6570 426 1 1314 8883 151 28 65 chrX 95641905 95642967 -71007329 - L1_Mur2 LINE L1 -2833 3044 2049 1 1314 216 0 0 0 chrX 95642967 95642991 -71007305 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 1314 8883 154 25 58 chrX 95642991 95643987 -71006309 - L1_Mur2 LINE L1 -3829 2048 987 1 1314 4914 22 0 0 chrX 95643984 95644561 -71005735 - L1_Mm LINE L1 -454 5429 4853 1 1314 3362 43 9 2 chrX 95644561 95644982 -71005314 + L1Md_F3 LINE L1 6161 6584 0 1 1314 271 304 0 29 chrX 95644989 95645094 -71005202 - L1VL2 LINE L1 -5639 696 595 1 1314 359 93 11 44 chrX 95645658 95645748 -71004548 + (CAAAAA)n Simple_repeat Simple_repeat 4 90 0 1 1314 3892 77 12 0 chrX 95645987 95646497 -71003799 - L1_Mus2 LINE L1 0 6566 6051 2 1314 3771 55 4 2 chrX 95646503 95646997 -71003299 + L1_Mus2 LINE L1 5584 6049 -517 2 1314 242 343 73 22 chrX 95647896 95648033 -71002263 - MIRb SINE MIR -118 150 7 2 1314 549 297 137 31 chrX 95648530 95648942 -71001354 - Lx9 LINE L1 -55 7589 7071 2 1314 627 256 50 44 chrX 95649077 95649257 -71001039 - B3A SINE B2 -16 182 2 2 1314 867 320 129 7 chrX 95649681 95650093 -71000203 - Lx7 LINE L1 -1020 6676 6215 2 1314 22 70 0 0 chrX 95650096 95650139 -71000157 + AT_rich Low_complexity Low_complexity 1 43 0 2 1314 688 50 0 0 chrX 95650139 95650238 -71000058 - L1Md_T LINE L1 -1 6581 6483 2 1314 472 140 37 0 chrX 95650271 95650378 -70999918 - Lx9 LINE L1 -1 7643 7533 2 1314 578 216 27 48 chrX 95650719 95650865 -70999431 - Lx8 LINE L1 -1540 5933 5791 2 1314 1292 334 78 28 chrX 95650880 95651598 -70998698 + Lx8 LINE L1 6714 7467 -6 2 1314 809 97 0 16 chrX 95651747 95651873 -70998423 + (GAAAA)n Simple_repeat Simple_repeat 2 125 0 2 1314 293 262 88 0 chrX 95652209 95652289 -70998007 + PB1D10 SINE Alu 16 102 -15 2 1314 1266 69 11 6 chrX 95652291 95652467 -70997829 + B2_Mm2 SINE B2 15 191 -4 2 1314 25 31 0 0 chrX 95652732 95652764 -70997532 + AT_rich Low_complexity Low_complexity 1 32 0 2 1314 472 294 88 7 chrX 95652814 95652961 -70997335 - B3A SINE B2 -1 197 39 2 1314 745 175 56 7 chrX 95652961 95653105 -70997191 + RMER17C LTR ERVK 228 378 -32 2 1314 969 185 10 83 chrX 95653141 95653442 -70996854 - RMER17C LTR ERVK -131 279 1 2 1314 328 280 116 67 chrX 95653644 95654133 -70996163 - Lx8 LINE L1 -1194 6279 5742 2 1314 2203 199 17 12 chrX 95654135 95654546 -70995750 - MTC LTR MaLR 0 421 9 2 1314 488 323 37 0 chrX 95654550 95654714 -70995582 - Lx7 LINE L1 -1918 5778 5609 2 1314 766 66 187 14 chrX 95654714 95654853 -70995443 + L1_Mus4 LINE L1 6473 6635 -1 2 1314 629 297 73 10 chrX 95654872 95655161 -70995135 - Lx7 LINE L1 -269 5611 5305 2 1314 1029 109 0 13 chrX 95655306 95655464 -70994832 + L1_Mus1 LINE L1 6410 6565 -2 2 1314 395 178 0 0 chrX 95655576 95655649 -70994647 - Lx7 LINE L1 -992 4885 4813 2 1314 13485 141 1 52 chrX 95655640 95659139 -70991157 - L1Md_F2 LINE L1 -19 6563 3265 2 1314 252 200 0 0 chrX 95659148 95659203 -70991093 - Lx7 LINE L1 -1069 4811 4757 2 1314 248 349 145 4 chrX 95659401 95659643 -70990653 - L1M2 LINE L1 -4191 2658 2383 2 1314 36715 28 2 7 chrX 95659674 95664876 -70985420 + L1Md_T LINE L1 416 5586 -297 2 1314 8276 38 1 0 chrX 95664876 95665871 -70984425 + L1Md_T LINE L1 5587 6582 0 2 1314 213 39 0 0 chrX 95666060 95666086 -70984210 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 1314 2637 200 33 21 chrX 95666108 95666739 -70983557 - Lx4B LINE L1 -45 6931 6296 2 1314 2271 153 0 81 chrX 95666726 95667177 -70983119 + Lx4B LINE L1 5404 5820 -1238 2 1314 4671 64 0 0 chrX 95667643 95668233 -70982063 - L1_Mus1 LINE L1 -365 6201 5612 2 1314 2434 39 39 3 chrX 95668233 95668542 -70981754 + L1_Mus1 LINE L1 6248 6567 0 2 1314 692 233 103 5 chrX 95668572 95668766 -70981530 + B3 SINE B2 4 216 0 2 1314 21 36 0 0 chrX 95669298 95669326 -70980970 + AT_rich Low_complexity Low_complexity 1 28 0 2 1314 329 315 82 27 chrX 95669673 95669856 -70980440 + L1MDa LINE L1 319 511 -6122 2 1314 31 44 0 0 chrX 95669883 95669928 -70980368 + AT_rich Low_complexity Low_complexity 1 45 0 2 1314 947 291 29 88 chrX 95669990 95670089 -70980207 - Lx9 LINE L1 -1671 5973 5879 2 1314 1120 101 0 0 chrX 95670089 95670237 -70980059 + B1_Mus1 SINE Alu 1 148 0 2 1314 2418 232 65 22 chrX 95670237 95670908 -70979388 - Lx9 LINE L1 -1766 5878 5165 2 1314 2888 243 102 78 chrX 95670916 95672198 -70978098 - L1_Rod LINE L1 -314 5533 4221 2 1314 1496 175 83 10 chrX 95672235 95672523 -70977773 - ORR1B2 LTR MaLR -8 359 51 2 1314 1978 236 93 19 chrX 95672546 95673213 -70977083 + L1_Rod LINE L1 2323 3038 -2809 2 1314 577 167 8 0 chrX 95673246 95673366 -70976930 + Lx9 LINE L1 7516 7636 -8 2 1314 1937 269 37 16 chrX 95673391 95674034 -70976262 + L1_Mur3 LINE L1 4515 5171 -709 2 1314 352 375 26 0 chrX 95674041 95674233 -70976063 + Lx8 LINE L1 6816 7012 -461 2 1314 237 227 29 43 chrX 95674235 95674304 -70975992 + MTD-int LTR MaLR 1187 1254 -4 2 1314 937 295 25 139 chrX 95674330 95674803 -70975493 + MTD LTR MaLR 1 419 0 2 1314 560 282 50 52 chrX 95675921 95676424 -70973872 + L1M4 LINE L1 5157 5667 -511 2 1314 505 287 7 32 chrX 95676454 95676609 -70973687 + Lx8 LINE L1 6261 6411 -1062 2 1314 825 326 83 42 chrX 95676592 95676648 -70973648 + Lx8 LINE L1 6941 6990 -483 2 1314 4590 34 4 2 chrX 95676648 95677202 -70973094 + L1Md_F2 LINE L1 6028 6582 0 2 1314 825 326 83 42 chrX 95677202 95677445 -70972851 + Lx8 LINE L1 6991 7230 -243 2 1314 516 45 0 0 chrX 95677445 95677512 -70972784 + (TTTTG)n Simple_repeat Simple_repeat 2 68 0 2 1314 825 326 83 42 chrX 95677512 95677714 -70972582 + Lx8 LINE L1 7231 7463 -10 2 1314 447 210 0 0 chrX 95677870 95677951 -70972345 + B3A SINE B2 10 90 -108 2 1314 651 26 0 0 chrX 95677998 95678075 -70972221 + (TC)n Simple_repeat Simple_repeat 2 78 0 2 1314 219 36 0 0 chrX 95678076 95678104 -70972192 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 1314 342 276 94 8 chrX 95678139 95678256 -70972040 - MTE-int LTR MaLR -1422 158 32 2 1314 395 246 26 43 chrX 95678261 95678376 -70971920 - MTD LTR MaLR -44 375 263 2 1314 427 301 30 8 chrX 95678516 95678650 -70971646 - MTD LTR MaLR -260 159 23 2 1314 21335 74 5 94 chrX 95678706 95681732 -70968564 - L1_Mm LINE L1 -187 5696 2968 2 1314 4854 40 0 0 chrX 95681732 95682312 -70967984 + L1Md_T LINE L1 6001 6580 -2 2 164 21335 74 5 94 chrX 95682312 95682733 -70967563 - L1_Mm LINE L1 -2916 2967 2558 2 1315 2765 89 38 13 chrX 95682756 95683153 -70967143 - MTB_Mm LTR MaLR 0 407 1 2 1315 1162 259 68 50 chrX 95683215 95683717 -70966579 - MT2B LTR ERVL -2 599 1 2 1315 1420 254 93 38 chrX 95683718 95684523 -70965773 - Lx9 LINE L1 -302 7342 6755 2 1315 261 0 0 0 chrX 95684523 95684552 -70965744 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 1315 352 306 72 8 chrX 95684552 95684655 -70965641 - Lx9 LINE L1 -890 6754 6652 2 1315 234 233 0 0 chrX 95684664 95684707 -70965589 + Lx9 LINE L1 5849 5891 -1753 2 1315 2582 279 74 18 chrX 95684737 95685989 -70964307 - L1_Mur3 LINE L1 -2220 3660 2338 2 1315 476 250 17 35 chrX 95686007 95686181 -70964115 + L1_Rod LINE L1 1712 1882 -3965 2 1315 568 244 75 7 chrX 95686169 95686466 -70963830 + L1_Rod LINE L1 3335 3634 -2509 2 1315 946 281 115 35 chrX 95686467 95687336 -70962960 + L1_Rod LINE L1 4030 5276 -870 2 1315 604 314 118 12 chrX 95687499 95687744 -70962552 + L2a LINE L2 2766 3036 -383 2 1315 301 136 0 0 chrX 95687755 95687799 -70962497 + RMER30 DNA MER1_type 7 50 -152 2 1315 252 378 76 20 chrX 95687867 95688169 -70962127 + L2a LINE L2 3035 3353 -73 2 1315 595 260 16 38 chrX 95688626 95688810 -70961486 - B3A SINE B2 -18 180 1 2 1315 208 357 131 19 chrX 95689012 95689172 -70961124 + L2 LINE L2 2700 2877 -542 2 1315 298 326 22 22 chrX 95689331 95689422 -70960874 + RSINE1 SINE B4 24 114 -51 2 1315 1098 294 41 36 chrX 95689428 95689844 -70960452 - Lx8 LINE L1 -239 7234 6817 2 1315 360 0 0 0 chrX 95689844 95689884 -70960412 + (TATAA)n Simple_repeat Simple_repeat 5 44 0 2 1315 6589 183 115 27 chrX 95689951 95691462 -70958834 + L1_Mur3 LINE L1 3577 5209 -671 2 1315 3005 78 2 12 chrX 95691462 95691866 -70958430 - MTB LTR MaLR 0 400 1 2 1315 6589 196 110 25 chrX 95691866 95692075 -70958221 + L1_Mur3 LINE L1 5210 5486 -814 2 1315 234 206 41 0 chrX 95692061 95692134 -70958162 + Lx7 LINE L1 7291 7366 -330 2 1315 229 202 0 63 chrX 95692134 95692229 -70958067 + T-rich Low_complexity Low_complexity 3 91 0 2 1315 255 359 6 6 chrX 95692335 95692492 -70957804 + L1_Rod LINE L1 2230 2386 -3461 2 1315 37537 15 4 7 chrX 95692491 95697695 -70952601 + L1Md_A LINE L1 406 5586 -297 2 1315 8590 23 1 0 chrX 95697695 95698690 -70951606 + L1Md_A LINE L1 5587 6582 0 2 1315 1228 303 99 22 chrX 95698706 95699979 -70950317 + L1M2 LINE L1 2366 3746 -2397 2 1315 608 278 127 30 chrX 95699954 95700388 -70949908 + L1M2 LINE L1 4265 4740 -1140 2 1315 1870 174 12 94 chrX 95700392 95700496 -70949800 - RMER6C LTR ERVK 0 690 592 2 1315 1391 157 207 29 chrX 95700496 95700679 -70949617 + RMER17C LTR ERVK 1 188 -222 2 1315 284 0 0 27 chrX 95700679 95700716 -70949580 + (TCC)n Simple_repeat Simple_repeat 3 38 0 2 1315 1391 157 207 29 chrX 95700716 95700880 -70949416 + RMER17C LTR ERVK 189 409 -1 2 1315 1870 174 12 94 chrX 95700880 95701264 -70949032 - RMER6C LTR ERVK -99 591 242 2 1315 865 281 63 44 chrX 95701265 95701630 -70948666 + L1_Rod LINE L1 5382 5753 -94 2 1315 198 0 0 0 chrX 95701679 95701701 -70948595 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 1315 264 289 92 43 chrX 95702701 95702864 -70947432 - MIRb SINE MIR 0 268 98 2 1315 234 300 8 68 chrX 95703529 95703647 -70946649 + MLT1A0 LTR MaLR 1 111 -254 2 1315 352 333 27 41 chrX 95703917 95704064 -70946232 - RSINE1 SINE B4 -10 155 11 2 1315 280 80 0 0 chrX 95704566 95704616 -70945680 + L1_Mus4 LINE L1 6584 6633 -3 2 1315 182 420 37 18 chrX 95705338 95705447 -70944849 + MER5B DNA MER1_type 53 163 -15 2 1315 228 331 62 38 chrX 95705455 95705615 -70944681 - MIR3 SINE MIR -41 167 4 2 1315 721 136 8 0 chrX 95705665 95705790 -70944506 - Lx2 LINE L1 -2 6995 6870 2 1315 300 289 147 7 chrX 95706407 95706543 -70943753 + MLT1E1 LTR MaLR 3 157 -497 2 1315 1668 248 80 10 chrX 95706545 95706945 -70943351 + Lx5 LINE L1 6622 7049 -1 2 1315 274 280 28 65 chrX 95707118 95707225 -70943071 + MLT1E1 LTR MaLR 348 450 -174 2 1315 211 350 124 0 chrX 95707649 95707786 -70942510 - MIR SINE MIR -61 201 48 2 1315 269 228 0 12 chrX 95707964 95708044 -70942252 + (TG)n Simple_repeat Simple_repeat 2 80 0 2 1315 775 253 24 0 chrX 95710143 95710313 -70939983 + MTE2a LTR MaLR 206 379 0 2 1315 24 0 0 0 chrX 95711357 95711381 -70938915 + AT_rich Low_complexity Low_complexity 1 24 0 2 1315 2291 83 22 0 chrX 95711915 95712239 -70938057 + L1_Mus3 LINE L1 6300 6630 -8 2 1315 2461 148 17 10 chrX 95712370 95712780 -70937516 + MTC LTR MaLR 5 417 -4 2 1315 451 299 78 28 chrX 95712785 95712926 -70937370 + RSINE1 SINE B4 16 163 -2 2 1315 249 314 67 44 chrX 95713033 95713439 -70936857 + L1ME1 LINE L1 4351 4765 -1381 2 1315 795 208 0 0 chrX 95713652 95713782 -70936514 + B1_Mur4 SINE Alu 2 131 -19 2 1315 33 25 0 0 chrX 95713849 95713889 -70936407 + AT_rich Low_complexity Low_complexity 1 40 0 2 1315 751 233 17 23 chrX 95713918 95714094 -70936202 + Lx6 LINE L1 7258 7432 -28 2 1315 234 116 0 0 chrX 95714094 95714137 -70936159 + (CATA)n Simple_repeat Simple_repeat 2 44 0 2 1315 204 91 90 11 chrX 95714229 95714318 -70935978 + (TA)n Simple_repeat Simple_repeat 2 97 0 2 1315 258 246 42 84 chrX 95714403 95714474 -70935822 - RMER15 LTR ERVL -105 470 403 3 1315 402 267 86 8 chrX 95714497 95714614 -70935682 - Lx8 LINE L1 -351 7122 6997 3 1315 512 323 200 13 chrX 95714726 95715113 -70935183 - LTR16B1 LTR ERVL -8 472 15 3 1315 247 313 51 40 chrX 95715196 95715432 -70934864 + L1ME1 LINE L1 5770 6020 -339 2 1315 257 250 264 56 chrX 95715449 95715627 -70934669 - L1M5 LINE L1 -1170 4976 4762 3 1315 437 301 132 24 chrX 95715684 95716055 -70934241 - L1M2 LINE L1 -951 5189 4779 3 1315 541 269 96 41 chrX 95716052 95716323 -70933973 - L1MA5 LINE L1 -317 5983 5698 3 1315 306 329 33 27 chrX 95716470 95716620 -70933676 - L1MEf LINE L1 -5987 213 63 3 1315 362 315 45 0 chrX 95716743 95716854 -70933442 + PB1D10 SINE Alu 1 116 -1 3 1315 3431 37 0 0 chrX 95716978 95717388 -70932908 + L1Md_F2 LINE L1 6173 6582 0 3 1315 227 361 69 42 chrX 95717495 95717712 -70932584 - MamRep605 Unknown Unknown -108 768 546 3 1315 229 342 14 14 chrX 95718121 95718195 -70932101 - ID4_ SINE ID -1 82 9 3 1315 204 125 0 0 chrX 95718365 95718397 -70931899 + (CACCAT)n Simple_repeat Simple_repeat 5 36 0 3 1315 5802 218 40 37 chrX 95718444 95719674 -70930622 - Lx6 LINE L1 -10 7450 6218 3 1315 1765 223 37 27 chrX 95719670 95720080 -70930216 + Lx6 LINE L1 5830 6243 -1217 3 1315 1990 233 12 43 chrX 95720415 95720904 -70929392 + RMER19C LTR ERVK 138 611 0 3 1315 357 24 0 0 chrX 95720923 95720965 -70929331 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1315 237 120 160 0 chrX 95720979 95721029 -70929267 + Lx8 LINE L1 7410 7467 -6 3 1315 24 0 0 0 chrX 95721124 95721148 -70929148 + AT_rich Low_complexity Low_complexity 1 24 0 3 1315 226 125 42 0 chrX 95722066 95722114 -70928182 + (CAA)n Simple_repeat Simple_repeat 2 51 0 3 1315 305 313 40 128 chrX 95722955 95723138 -70927158 - B3A SINE B2 -3 213 50 3 1315 2367 81 43 6 chrX 95724514 95724860 -70925436 + Lx2 LINE L1 6148 6506 -491 3 1315 740 98 0 0 chrX 95724860 95724972 -70925324 + Lx2 LINE L1 6884 6995 -2 3 1315 299 275 40 128 chrX 95725053 95725178 -70925118 + PB1D10 SINE Alu 1 114 -3 3 1315 807 188 134 6 chrX 95725469 95725640 -70924656 - ORR1C2 LTR MaLR -13 371 179 3 1315 2843 171 28 16 chrX 95725641 95726151 -70924145 + RMER20A LTR ERVK 1 516 0 3 1315 798 199 43 59 chrX 95726151 95726316 -70923980 - ORR1C2 LTR MaLR -212 162 1 3 1315 1211 45 7 0 chrX 95726906 95727061 -70923235 + L1Md_T LINE L1 6426 6581 -1 3 1315 305 322 34 17 chrX 95727127 95727244 -70923052 + PB1D7 SINE Alu 1 119 -1 3 1315 339 238 0 0 chrX 95727372 95727435 -70922861 - tRNA-Ala-GCY_ tRNA tRNA -12 63 1 3 1315 210 102 86 14 chrX 95727481 95727551 -70922745 + (TA)n Simple_repeat Simple_repeat 1 75 0 3 1315 760 175 42 38 chrX 95728434 95728624 -70921672 - RMER19B LTR ERVK -570 167 1 3 1315 1051 216 22 18 chrX 95728663 95728885 -70921411 + MTD LTR MaLR 1 223 -196 3 1315 1007 121 103 11 chrX 95729028 95729212 -70921084 - L1_Mus3 LINE L1 0 6638 6438 3 1315 620 335 44 4 chrX 95730045 95730273 -70920023 + MER90a LTR ERV1 1 237 -377 3 1315 690 303 22 22 chrX 95730269 95730495 -70919801 + MER90a LTR ERV1 372 597 -17 3 1315 212 171 0 0 chrX 95731039 95731080 -70919216 + A-rich Low_complexity Low_complexity 1 41 0 3 1315 3334 48 2 0 chrX 95731168 95731563 -70918733 + MTA_Mm LTR MaLR 1 396 0 3 1315 414 0 0 0 chrX 95731926 95731972 -70918324 + (TTTTA)n Simple_repeat Simple_repeat 5 50 0 3 1315 692 214 0 58 chrX 95731981 95732120 -70918176 - B1_Mus1 SINE Alu -12 136 6 3 1315 1552 42 0 0 chrX 95732144 95732336 -70917960 - L1Md_F2 LINE L1 -12 6570 6379 3 1315 8275 47 2 3 chrX 95732341 95733433 -70916863 - L1_Mm LINE L1 -579 5304 4214 3 1315 246 180 0 0 chrX 95733637 95733698 -70916598 + GA-rich Low_complexity Low_complexity 2 62 0 3 1315 459 0 0 0 chrX 95733971 95734022 -70916274 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1315 1113 282 58 15 chrX 95734405 95734594 -70915702 + Lx8 LINE L1 7050 7241 -232 3 1315 450 53 0 0 chrX 95734594 95734651 -70915645 + (TTTTG)n Simple_repeat Simple_repeat 1 57 0 3 1315 1113 282 58 15 chrX 95734651 95734857 -70915439 + Lx8 LINE L1 7242 7462 -11 3 1315 2102 268 130 63 chrX 95734861 95735987 -70914309 + Charlie1a DNA MER1_type 246 1446 -9 3 1315 294 269 12 25 chrX 95736182 95736262 -70914034 + MTEa LTR MaLR 1 79 -300 3 1315 621 274 78 6 chrX 95736344 95736524 -70913772 + MT2A LTR ERVL 333 525 -8 3 1315 188 383 8 42 chrX 95736605 95736725 -70913571 - MIRm SINE MIR -93 183 68 3 1315 261 375 0 12 chrX 95736838 95736919 -70913377 + ID4 SINE ID 1 80 -3 3 1315 1855 151 40 70 chrX 95737534 95737933 -70912363 - RMER1B Other Other -17 1049 663 3 1315 1608 27 0 11 chrX 95738486 95738673 -70911623 + B2_Mm1a SINE B2 2 186 -7 3 1315 253 324 44 0 chrX 95738927 95738995 -70911301 + LTR33 LTR ERVL 28 98 -417 3 1315 597 28 0 0 chrX 95739057 95739128 -70911168 + (GA)n Simple_repeat Simple_repeat 1 71 0 3 1315 216 341 129 34 chrX 95739552 95739761 -70910535 + L3 LINE CR1 749 977 -3512 3 1315 30 27 0 0 chrX 95740248 95740285 -70910011 + AT_rich Low_complexity Low_complexity 1 37 0 3 1315 4437 148 60 28 chrX 95740707 95741639 -70908657 - RLTR13C2 LTR ERVK 0 983 1 3 1315 1680 191 36 41 chrX 95741753 95742194 -70908102 + RMER17B LTR ERVK 1 439 -519 3 1315 2354 236 20 105 chrX 95742213 95742899 -70907397 + RMER13B LTR ERVK 272 899 -9 3 1315 926 241 20 10 chrX 95742921 95743122 -70907174 + MTEa LTR MaLR 166 368 -11 3 1315 258 258 53 53 chrX 95743123 95743217 -70907079 + MER91B DNA Tip100 81 174 -16 3 1315 785 306 160 14 chrX 95743380 95743662 -70906634 + MTE2b LTR MaLR 42 364 -15 3 1315 221 392 41 8 chrX 95743686 95743807 -70906489 + MIRb SINE MIR 32 156 -112 3 1315 210 128 0 0 chrX 95743872 95743911 -70906385 + (TC)n Simple_repeat Simple_repeat 1 39 0 3 1315 24 0 0 0 chrX 95744589 95744613 -70905683 + AT_rich Low_complexity Low_complexity 1 24 0 3 1315 1162 42 14 0 chrX 95744641 95744785 -70905511 - B1_Mm SINE Alu 0 147 2 3 1315 232 294 20 0 chrX 95745267 95745369 -70904927 - Lx6 LINE L1 -28 7432 7329 3 1315 381 192 33 46 chrX 95745369 95745522 -70904774 + A-rich Low_complexity Low_complexity 2 152 0 3 1315 824 236 104 31 chrX 95745541 95745830 -70904466 + Lx7 LINE L1 6884 7193 -503 3 1315 405 0 0 0 chrX 95745918 95745963 -70904333 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1315 1336 149 8 0 chrX 95746163 95746411 -70903885 - L1Md_F LINE L1 -5500 1019 770 3 1315 24 32 0 0 chrX 95747066 95747097 -70903199 + AT_rich Low_complexity Low_complexity 1 31 0 3 1315 186 380 22 0 chrX 95747097 95747189 -70903107 + MIR SINE MIR 49 142 -120 3 1315 207 0 0 0 chrX 95747645 95747668 -70902628 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1315 255 313 36 12 chrX 95747813 95747897 -70902399 + MLT1E1A LTR MaLR 426 511 -169 3 1315 662 287 103 0 chrX 95748008 95748182 -70902114 - B3 SINE B2 -21 195 4 3 1315 186 379 29 19 chrX 95748234 95748339 -70901957 + MIRc SINE MIR 117 222 -46 3 1315 216 312 37 24 chrX 95748770 95748852 -70901444 + MIRm SINE MIR 65 147 -129 3 1315 696 189 8 15 chrX 95749616 95749750 -70900546 - MER5A1 DNA MER1_type -1 165 33 3 1315 714 186 63 68 chrX 95749807 95749997 -70900299 - B2_Mm2 SINE B2 -5 190 2 3 1315 272 345 99 25 chrX 95751399 95751601 -70898695 + MIRb SINE MIR 9 225 -43 3 1315 194 250 51 26 chrX 95752471 95752549 -70897747 + MIRc SINE MIR 7 86 -182 3 1315 454 309 39 7 chrX 95752647 95752800 -70897496 - Charlie4z DNA MER1_type -2 165 8 3 1315 481 279 53 11 chrX 95754304 95754472 -70895824 + MIRc SINE MIR 84 256 -6 3 1315 180 302 47 16 chrX 95754605 95754669 -70895627 - MIR3 SINE MIR -52 156 91 3 1315 267 333 158 32 chrX 95755641 95756041 -70894255 + L2 LINE L2 2349 2798 -621 3 1315 192 115 82 0 chrX 95757221 95757282 -70893014 + (TCTCTG)n Simple_repeat Simple_repeat 1 66 0 3 1315 237 360 38 53 chrX 95757557 95757689 -70892607 + L4 LINE RTE 1220 1349 -680 3 1315 222 343 0 0 chrX 95757829 95757896 -70892400 + GA-rich Low_complexity Low_complexity 2 68 0 3 1315 22 35 0 0 chrX 95757958 95757987 -70892309 + AT_rich Low_complexity Low_complexity 1 29 0 3 1315 2385 145 71 5 chrX 95758192 95758587 -70891709 + MTC LTR MaLR 1 421 0 3 1315 25 0 0 0 chrX 95759812 95759837 -70890459 + AT_rich Low_complexity Low_complexity 1 25 0 3 1315 799 261 15 30 chrX 95760966 95761167 -70889129 + B3A SINE B2 1 198 0 3 1315 711 219 0 0 chrX 95761689 95761826 -70888470 + B1F SINE Alu 3 139 -10 3 1315 591 215 15 7 chrX 95761829 95761965 -70888331 + Lx5 LINE L1 6914 7050 0 3 1315 335 367 68 21 chrX 95762403 95762595 -70887701 + MIRb SINE MIR 8 208 -60 3 1315 3195 276 110 23 chrX 95762718 95763959 -70886337 + Lx8 LINE L1 6120 7467 -6 3 1315 24 32 0 0 chrX 95764231 95764262 -70886034 + AT_rich Low_complexity Low_complexity 1 31 0 3 1315 326 373 53 26 chrX 95764286 95764476 -70885820 - MIRc SINE MIR -59 209 15 3 1315 500 283 57 57 chrX 95764838 95765014 -70885282 - MER5B DNA MER1_type 0 178 3 3 1315 280 292 81 45 chrX 95765439 95765550 -70884746 + MIR3 SINE MIR 2 116 -92 3 1315 345 319 66 72 chrX 95765957 95766215 -70884081 + L2b LINE L2 3121 3386 -1 3 1315 279 0 0 0 chrX 95766685 95766716 -70883580 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1315 355 200 135 0 chrX 95767039 95767142 -70883154 - MIRc SINE MIR -84 184 66 3 1315 408 340 0 0 chrX 95768659 95768765 -70881531 + B3 SINE B2 40 145 -71 3 1315 260 259 141 0 chrX 95768770 95768855 -70881441 + MIRb SINE MIR 88 184 -84 4 1315 244 183 49 16 chrX 95768943 95769004 -70881292 + B3 SINE B2 148 210 -6 4 1315 268 255 72 31 chrX 95769093 95769190 -70881106 + MIRb SINE MIR 95 195 -73 4 1315 182 128 26 0 chrX 95770664 95770703 -70879593 + CT-rich Low_complexity Low_complexity 1 40 0 4 1315 447 228 17 26 chrX 95770962 95771079 -70879217 + PB1D10 SINE Alu 2 117 0 4 1315 276 214 59 30 chrX 95771079 95771180 -70879116 + Lx7 LINE L1 4631 4734 -1409 4 1315 370 80 0 0 chrX 95771199 95771249 -70879047 + HAL1-3A_ME LINE L1 1969 2018 -840 4 1315 497 89 25 0 chrX 95771249 95771328 -70878968 + (CATA)n Simple_repeat Simple_repeat 1 81 0 4 1315 189 0 0 0 chrX 95771337 95771358 -70878938 + (CAGA)n Simple_repeat Simple_repeat 4 24 0 4 1315 323 279 90 58 chrX 95771439 95771858 -70878438 + Lx7 LINE L1 4790 5269 -874 4 1315 1856 174 25 64 chrX 95771877 95772238 -70878058 + ORR1C2 LTR MaLR 38 384 0 4 1315 380 278 37 9 chrX 95772238 95772394 -70877902 + Lx7 LINE L1 5284 5499 -801 4 1315 2031 143 171 41 chrX 95772430 95772868 -70877428 + Lx LINE L1 6154 6648 -6 4 1315 1089 239 51 32 chrX 95772906 95773315 -70876981 + Lx7 LINE L1 5457 5904 -1792 4 1315 559 212 82 15 chrX 95775212 95775408 -70874888 + Lx7 LINE L1 7436 7644 0 4 1315 378 259 26 61 chrX 95775739 95775854 -70874442 + PB1D10 SINE Alu 6 116 -1 4 1315 234 0 0 0 chrX 95776003 95776029 -70874267 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 4 1315 12467 63 6 6 chrX 95776068 95778492 -70871804 - L1Md_F2 LINE L1 0 6582 4157 4 1315 226 384 36 12 chrX 95778534 95778700 -70871596 + MIRb SINE MIR 32 201 -67 4 1315 267 254 0 0 chrX 95778746 95778813 -70871483 + L1MB7 LINE L1 5489 5555 -623 4 1315 927 217 14 24 chrX 95778814 95779102 -70871194 + L1VL1 LINE L1 15 299 -6123 4 1315 389 223 0 0 chrX 95779093 95779187 -70871109 + L1Md_F3 LINE L1 536 629 -5987 4 1315 609 200 0 0 chrX 95779184 95779304 -70870992 + L1Md_F LINE L1 209 328 -6191 4 1315 244 139 0 0 chrX 95779302 95779345 -70870951 + L1Md_F3 LINE L1 587 629 -5987 4 1315 33551 46 0 8 chrX 95779343 95784048 -70866248 + L1Md_F3 LINE L1 928 5586 -297 4 1315 7573 57 13 0 chrX 95784048 95785019 -70865277 + L1Md_F3 LINE L1 5587 6570 -14 4 1315 522 280 261 2 chrX 95785157 95785555 -70864741 + L1MB7 LINE L1 5644 6144 -40 4 1315 350 336 24 16 chrX 95785622 95785749 -70864547 - MIR3 SINE MIR -48 160 33 4 1315 237 329 14 28 chrX 95785750 95785822 -70864474 - L2b LINE L2 -2 3373 3303 4 1315 285 51 0 0 chrX 95786543 95786582 -70863714 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 4 1315 258 32 0 0 chrX 95786586 95786617 -70863679 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1315 27488 29 1 0 chrX 95787185 95790624 -70859672 + L1Md_T LINE L1 2145 5585 -298 4 1315 8310 38 2 0 chrX 95790625 95791619 -70858677 + L1Md_T LINE L1 5587 6582 0 4 1315 310 370 99 14 chrX 95791647 95791869 -70858427 - L2b LINE L2 -1231 2188 1948 4 1315 197 319 56 89 chrX 95791873 95792052 -70858244 + L2c LINE L2 3211 3383 -4 4 1315 213 39 0 0 chrX 95792993 95793019 -70857277 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1315 216 171 0 0 chrX 95793077 95793112 -70857184 + (TTG)n Simple_repeat Simple_repeat 2 36 0 4 1315 967 225 76 16 chrX 95793325 95793712 -70856584 - Lx7 LINE L1 -1672 5972 5593 4 1315 1215 108 67 0 chrX 95793712 95793907 -70856389 + MTC LTR MaLR 1 208 -213 4 1315 1215 247 22 9 chrX 95793907 95794222 -70856074 + Lx5 LINE L1 6724 7042 -8 4 1315 1003 181 19 9 chrX 95794222 95794425 -70855871 + MTC LTR MaLR 199 421 0 4 1315 396 0 0 0 chrX 95794795 95794839 -70855457 + (A)n Simple_repeat Simple_repeat 1 44 0 4 1315 272 271 0 59 chrX 95795129 95795253 -70855043 + L1M4 LINE L1 4744 4860 -1286 4 1315 1673 155 43 0 chrX 95795274 95795578 -70854718 - L1_Mur1 LINE L1 -5882 1100 784 4 1315 22 0 0 0 chrX 95795662 95795684 -70854612 + AT_rich Low_complexity Low_complexity 1 22 0 4 1315 232 301 43 57 chrX 95795766 95795907 -70854389 + L1MA10 LINE L1 6193 6331 -3 4 1315 370 255 85 24 chrX 95796291 95796456 -70853840 + L1M4 LINE L1 5264 5438 -686 4 1315 282 381 45 11 chrX 95796902 95797080 -70853216 + MIRb SINE MIR 25 208 -60 4 1315 606 260 68 68 chrX 95797125 95797331 -70852965 + MER20 DNA MER1_type 7 212 -7 4 1315 204 179 0 0 chrX 95797498 95797537 -70852759 + (TCCA)n Simple_repeat Simple_repeat 3 41 0 4 1315 738 282 32 0 chrX 95797646 95797834 -70852462 - B3 SINE B2 -22 194 1 4 1315 277 338 69 69 chrX 95798202 95798463 -70851833 + L2a LINE L2 2494 2754 -665 4 1315 9493 15 1 1 chrX 95798537 95800354 -70849942 - L1Md_A LINE L1 -1 6581 4763 4 1315 349 417 45 33 chrX 95800754 95800997 -70849299 + MLT1J LTR MaLR 105 350 -162 4 1315 584 66 0 0 chrX 95800998 95801074 -70849222 + L1Md_F2 LINE L1 5943 6018 -564 4 1315 35331 28 2 8 chrX 95801075 95806290 -70844006 + L1Md_T LINE L1 411 5586 -297 4 1315 8407 37 0 0 chrX 95806290 95807286 -70843010 + L1Md_T LINE L1 5587 6582 0 4 1315 4795 39 0 2 chrX 95807285 95807852 -70842444 + L1Md_F2 LINE L1 6005 6570 -12 4 1315 282 291 269 0 chrX 95808012 95808187 -70842109 + MIRb SINE MIR 39 260 -8 4 1315 649 223 2 31 chrX 95808851 95808998 -70841298 - B1F SINE Alu 0 149 5 4 1315 342 39 0 0 chrX 95809025 95809077 -70841219 - L1_Mus4 LINE L1 -6 6630 6579 4 1315 366 350 93 71 chrX 95809146 95809595 -70840701 + L2a LINE L2 2964 3422 -4 4 1315 322 318 11 0 chrX 95810603 95810691 -70839605 - MIRb SINE MIR -163 105 17 4 1315 1191 53 0 0 chrX 95811387 95811538 -70838758 + (GAAA)n Simple_repeat Simple_repeat 2 152 0 4 1315 254 378 60 7 chrX 95811915 95812058 -70838238 - MIR3 SINE MIR -40 168 20 4 1315 472 318 82 0 chrX 95812519 95812714 -70837582 - MIRc SINE MIR -41 227 17 4 1315 275 278 0 77 chrX 95813146 95813224 -70837072 + ID2 SINE ID 2 73 -10 4 1315 238 284 194 0 chrX 95813354 95813488 -70836808 + MIRb SINE MIR 109 268 0 4 1316 385 139 12 25 chrX 95814109 95814190 -70836106 + CT-rich Low_complexity Low_complexity 3 82 0 4 1316 264 100 0 0 chrX 95814292 95814332 -70835964 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1316 236 259 0 33 chrX 95815575 95815635 -70834661 + MIR3 SINE MIR 135 192 -16 4 1316 245 228 152 0 chrX 95816253 95816332 -70833964 - MIRc SINE MIR -7 261 171 4 1316 1264 251 70 73 chrX 95817035 95817404 -70832892 - ORR1D2 LTR MaLR 0 370 3 4 1316 806 273 65 35 chrX 95817718 95818150 -70832146 - L1MD LINE L1 -657 5702 5258 4 1316 825 298 66 10 chrX 95818313 95818430 -70831866 - L1MD LINE L1 -1146 5000 4878 4 1316 362 228 0 48 chrX 95818430 95818513 -70831783 - ID4 SINE ID -2 81 3 4 1316 825 298 66 10 chrX 95818513 95818972 -70831324 - L1MD LINE L1 -1269 4877 4392 4 1316 897 240 95 32 chrX 95818969 95819253 -70831043 + Lx7 LINE L1 6611 6912 -784 4 1316 596 216 0 0 chrX 95819270 95819395 -70830901 + Lx7 LINE L1 7145 7269 -427 4 1316 189 74 0 0 chrX 95819662 95819689 -70830607 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 1316 521 299 92 0 chrX 95819709 95819916 -70830380 + L2 LINE L2 2726 2951 -468 4 1316 752 185 6 0 chrX 95819967 95820129 -70830167 + (TAGA)n Simple_repeat Simple_repeat 4 166 0 4 1316 364 257 73 45 chrX 95820274 95820384 -70829912 + MER58B DNA MER1_type 229 341 0 4 1316 274 275 121 8 chrX 95820993 95821125 -70829171 + Ricksha_c DNA MuDR 357 503 -1545 4 1316 350 293 129 8 chrX 95821726 95821850 -70828446 + B1F SINE Alu 2 140 -9 4 1316 268 321 25 0 chrX 95821866 95821947 -70828349 + ID4 SINE ID 1 83 0 4 1316 239 374 8 34 chrX 95822018 95822137 -70828159 + ID_B1 SINE B4 102 217 -7 4 1316 312 304 92 39 chrX 95823131 95823261 -70827035 + MIRb SINE MIR 43 179 -89 4 1316 252 194 56 0 chrX 95823790 95823862 -70826434 - Lx9 LINE L1 -149 7495 7420 4 1316 182 352 14 27 chrX 95824615 95824688 -70825608 - MIRc SINE MIR -192 76 5 4 1316 263 257 40 0 chrX 95824875 95824949 -70825347 - ID4 SINE ID -6 77 1 4 1316 874 262 131 37 chrX 95825013 95825394 -70824902 - Lx8 LINE L1 0 7473 7057 4 1316 398 239 92 17 chrX 95825450 95825569 -70824727 - Lx8 LINE L1 -493 6980 6853 4 1316 455 296 0 0 chrX 95825580 95825688 -70824608 + PB1 SINE Alu 1 108 -19 4 1316 1083 309 48 22 chrX 95825913 95826367 -70823929 + Lx8 LINE L1 6758 7223 -250 4 1316 21 0 0 0 chrX 95826617 95826638 -70823658 + AT_rich Low_complexity Low_complexity 1 21 0 4 1316 571 322 126 22 chrX 95826892 95827305 -70822991 + Lx8 LINE L1 6989 7444 -29 4 1316 531 191 132 18 chrX 95827377 95827559 -70822737 + Lx4B LINE L1 6767 6998 -2 4 1316 230 245 0 0 chrX 95827561 95827610 -70822686 + GA-rich Low_complexity Low_complexity 4 52 0 4 1316 231 389 43 0 chrX 95827954 95828093 -70822203 + MIR3 SINE MIR 61 205 -3 4 1316 420 169 0 0 chrX 95828338 95828415 -70821881 + (TA)n Simple_repeat Simple_repeat 1 77 0 4 1316 203 324 14 14 chrX 95828432 95828504 -70821792 + MER5A DNA MER1_type 115 186 -3 4 1316 446 290 35 41 chrX 95828527 95828696 -70821600 + MER58A DNA MER1_type 29 196 -28 4 1316 400 0 0 0 chrX 95828790 95828838 -70821458 - L1Md_F2 LINE L1 -686 5896 5849 4 1316 5708 41 7 1 chrX 95828838 95829530 -70820766 + L1Md_F2 LINE L1 5884 6579 -3 4 1316 299 271 56 43 chrX 95829635 95829797 -70820499 + L1MC5 LINE L1 7695 7858 -103 4 1316 343 306 156 37 chrX 95830104 95830348 -70819948 - Kanga1 DNA Tc2 -1467 278 6 4 1316 258 301 185 60 chrX 95830407 95830623 -70819673 + LTR82B Low_complexity ERVL 118 360 -470 4 1316 325 286 123 45 chrX 95830926 95831080 -70819216 + ID_B1 SINE B4 80 247 -45 4 1316 1143 327 71 21 chrX 95831274 95831708 -70818588 + LTR82B Low_complexity ERVL 364 819 -11 4 1316 296 287 28 65 chrX 95831958 95832066 -70818230 + MTEa LTR MaLR 1 104 -275 4 1316 608 175 0 8 chrX 95832165 95832292 -70818004 + CT-rich Low_complexity Low_complexity 4 129 0 4 1316 443 332 197 31 chrX 95832492 95833095 -70817201 - L1MC4 LINE L1 -91 7951 7249 4 1316 334 288 18 18 chrX 95833335 95833448 -70816848 - L1MC4 LINE L1 -1036 6846 6734 4 1316 3091 104 39 25 chrX 95833582 95834065 -70816231 - Lx LINE L1 0 6654 6165 4 1316 679 247 36 0 chrX 95834512 95834678 -70815618 - L1MB7 LINE L1 -11 6173 6002 4 1316 2292 131 79 3 chrX 95834795 95835186 -70815110 - ORR1A4-int LTR MaLR -1542 421 1 4 1316 1946 118 49 0 chrX 95835190 95835496 -70814800 - ORR1A4 LTR MaLR -8 321 1 4 1316 313 296 31 23 chrX 95835565 95835693 -70814603 + CT-rich Low_complexity Low_complexity 3 131 0 4 1316 283 356 128 18 chrX 95835808 95836034 -70814262 - MIRb SINE MIR -14 254 4 4 1316 270 0 0 0 chrX 95836421 95836451 -70813845 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1316 186 133 0 0 chrX 95836511 95836541 -70813755 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 1316 298 209 212 0 chrX 95838574 95838662 -70811634 + ORR1E LTR MaLR 181 327 -52 5 1316 330 296 15 53 chrX 95839099 95839231 -70811065 + MIRb SINE MIR 122 248 -20 5 1316 703 203 36 0 chrX 95839493 95839631 -70810665 + B1_Mur1 SINE Alu 1 143 -6 5 1316 276 30 0 0 chrX 95839639 95839672 -70810624 + (TATATG)n Simple_repeat Simple_repeat 1 33 0 5 1316 208 206 31 16 chrX 95839681 95839745 -70810551 + (CATATA)n Simple_repeat Simple_repeat 4 68 0 5 1316 457 233 37 46 chrX 95839986 95840094 -70810202 + PB1D10 SINE Alu 10 116 -1 5 1316 831 272 161 48 chrX 95840508 95841755 -70808541 + L1MCa LINE L1 254 1426 -5325 5 1316 5001 53 2 0 chrX 95841804 95842422 -70807874 + L1_Mus1 LINE L1 5949 6567 0 5 1316 338 306 0 62 chrX 95842475 95842604 -70807692 + BC1_Mm scRNA scRNA 9 129 -23 5 1316 309 51 0 0 chrX 95842683 95842722 -70807574 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 5 1316 210 37 0 0 chrX 95842723 95842750 -70807546 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 1316 378 61 0 0 chrX 95842746 95842795 -70807501 + (GGA)n Simple_repeat Simple_repeat 2 50 0 5 1316 351 65 0 0 chrX 95842952 95842998 -70807298 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 1316 2768 191 145 24 chrX 95843018 95843094 -70807202 + Lx9 LINE L1 6781 6859 -785 5 1316 372 22 0 0 chrX 95843094 95843139 -70807157 + (TAA)n Simple_repeat Simple_repeat 1 45 0 5 1316 2768 191 145 24 chrX 95843139 95843691 -70806605 + Lx9 LINE L1 6860 7467 -177 5 1316 183 80 0 0 chrX 95843691 95843716 -70806580 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1316 2768 191 145 24 chrX 95843716 95843837 -70806459 + Lx9 LINE L1 7468 7621 -23 5 1316 594 262 18 24 chrX 95843851 95844015 -70806281 - Lx6 LINE L1 -731 6729 6567 5 1316 847 65 8 0 chrX 95844027 95844150 -70806146 - L1_Mus1 LINE L1 0 6567 6444 5 1316 881 56 0 0 chrX 95844150 95844257 -70806039 + L1_Mus1 LINE L1 6320 6426 -141 5 1316 566 287 0 14 chrX 95844253 95844398 -70805898 - Lx5 LINE L1 -685 6365 6223 5 1316 188 111 28 0 chrX 95844426 95844462 -70805834 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 1316 672 225 14 0 chrX 95844823 95844965 -70805331 - B1_Mur2 SINE Alu -5 144 1 5 1316 986 320 49 3 chrX 95845487 95845791 -70804505 + MER68 LTR ERVL 246 563 0 5 1316 1120 75 0 7 chrX 95846187 95846334 -70803962 + B1_Mus1 SINE Alu 1 146 -2 5 1316 321 267 65 19 chrX 95846415 95846522 -70803774 - L2a LINE L2 -3 3423 3312 5 1316 262 286 9 28 chrX 95847359 95847467 -70802829 - L1ME3B LINE L1 -291 5949 5844 5 1316 255 221 44 0 chrX 95847876 95847944 -70802352 + L1M1 LINE L1 5815 5885 -415 5 1316 345 245 144 19 chrX 95848185 95848289 -70802007 - MTC LTR MaLR -304 117 1 5 1316 5650 62 7 1 chrX 95848739 95849465 -70800831 - L1_Mus3 LINE L1 -3 6635 5906 5 1316 3584 83 0 0 chrX 95849465 95849932 -70800364 + L1_Mus3 LINE L1 5387 5853 -30 5 1316 759 164 7 41 chrX 95849964 95850110 -70800186 - B1_Mm SINE Alu -2 145 5 5 1316 264 276 243 12 chrX 95850199 95850368 -70799928 + ORSL DNA Tip100 2 209 -66 5 1316 290 379 46 28 chrX 95850490 95850707 -70799589 - Tigger12c DNA MER2_type -513 221 1 5 1316 236 180 0 0 chrX 95850922 95850972 -70799324 + L1MB5 LINE L1 5355 5404 -760 5 1316 2689 233 44 32 chrX 95850965 95851549 -70798747 + L1_Rod LINE L1 4325 4909 -938 5 1316 210 71 0 0 chrX 95851549 95851577 -70798719 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1316 2689 233 44 32 chrX 95851577 95851833 -70798463 + L1_Rod LINE L1 4910 5174 -673 5 1316 575 306 114 42 chrX 95851933 95852196 -70798100 + B4A SINE B4 7 288 -4 5 1316 1457 262 72 24 chrX 95852353 95852814 -70797482 - RMER5 LTR ERV1 0 534 52 5 1316 335 280 40 92 chrX 95852851 95853024 -70797272 + L1MB5 LINE L1 5800 5963 -211 5 1316 526 227 1 1 chrX 95853029 95853139 -70797157 + B1F SINE Alu 4 113 -7 5 1316 296 341 49 70 chrX 95853139 95853171 -70797125 + ID_B1 SINE B4 85 223 -1 5 1316 401 312 28 14 chrX 95853183 95853326 -70796970 + L1MB5 LINE L1 5991 6135 -39 5 1316 3554 196 41 6 chrX 95853514 95854223 -70796073 + Lx9 LINE L1 6566 7299 -345 5 1316 738 314 46 0 chrX 95854223 95854462 -70795834 + MER2 DNA MER2_type 94 343 -2 5 1316 2261 85 6 18 chrX 95854560 95854895 -70795401 + L1Md_F2 LINE L1 6251 6581 -1 5 1316 499 319 9 0 chrX 95855232 95855345 -70794951 + ID_B1 SINE B4 96 209 -15 5 1316 212 170 128 0 chrX 95855307 95855354 -70794942 + PB1D10 SINE Alu 62 114 -3 5 1316 365 345 67 70 chrX 95855419 95855647 -70794649 - L1MB8 LINE L1 -46 6132 5898 5 1316 313 317 0 0 chrX 95855647 95855729 -70794567 - ID4 SINE ID 0 83 2 5 1316 365 345 67 70 chrX 95855729 95855799 -70794497 - L1MB8 LINE L1 -281 5897 5835 5 1316 207 0 0 0 chrX 95856164 95856187 -70794109 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 5 1316 24 0 0 0 chrX 95856439 95856463 -70793833 + AT_rich Low_complexity Low_complexity 1 24 0 5 1316 24 0 0 0 chrX 95856542 95856566 -70793730 + AT_rich Low_complexity Low_complexity 1 24 0 5 1316 382 302 25 17 chrX 95856568 95856686 -70793610 - MER3 DNA MER1_type -90 119 1 5 1316 259 263 0 66 chrX 95856765 95856853 -70793443 + ID4_ SINE ID 5 82 -1 5 1316 930 207 236 14 chrX 95857191 95857608 -70792688 + RLTR11A2 LTR ERVK 18 527 0 5 1316 266 266 35 35 chrX 95857872 95857985 -70792311 + Lx8 LINE L1 7361 7473 0 5 1316 9839 222 68 77 chrX 95858538 95863734 -70786562 + Lx9 LINE L1 737 5818 -59 5 1316 472 272 65 13 chrX 95863746 95863977 -70786319 - L1_Mur3 LINE L1 -402 5478 5236 5 1316 704 228 227 18 chrX 95863977 95864096 -70786200 + RMER17C LTR ERVK 1 149 -261 5 1316 359 21 21 0 chrX 95864096 95864144 -70786152 + (TC)n Simple_repeat Simple_repeat 1 49 0 5 1316 704 228 227 18 chrX 95864144 95864363 -70785933 + RMER17C LTR ERVK 150 410 0 5 1316 467 134 0 12 chrX 95864365 95864448 -70785848 + (TA)n Simple_repeat Simple_repeat 2 83 0 5 1316 1025 241 67 9 chrX 95864503 95864842 -70785454 + Lx9 LINE L1 5532 5920 -1553 5 1316 251 0 59 0 chrX 95864853 95864887 -70785409 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 5 1316 400 284 263 13 chrX 95865318 95865546 -70784750 + B4A SINE B4 1 285 -7 5 1316 227 155 33 33 chrX 95865652 95865712 -70784584 + T-rich Low_complexity Low_complexity 2 61 0 5 1316 403 240 197 62 chrX 95865725 95866115 -70784181 + L1M4b LINE L1 2554 2996 -4338 5 1316 606 143 0 0 chrX 95866242 95866347 -70783949 + (TA)n Simple_repeat Simple_repeat 1 105 0 5 1316 1494 198 113 18 chrX 95866477 95866869 -70783427 + Lx7 LINE L1 5463 5921 -1775 5 1316 2107 271 72 58 chrX 95867003 95867582 -70782714 + Lx9 LINE L1 6710 7318 -326 5 1316 362 0 62 0 chrX 95867582 95867630 -70782666 + (CAAAA)n Simple_repeat Simple_repeat 5 55 0 5 1316 2107 271 72 58 chrX 95867630 95867950 -70782346 + Lx9 LINE L1 7319 7621 -23 5 1316 22 35 0 0 chrX 95867950 95867979 -70782317 + AT_rich Low_complexity Low_complexity 1 29 0 5 1316 279 253 32 0 chrX 95867980 95868075 -70782221 - Lx9 LINE L1 0 7644 7547 5 1316 204 97 0 0 chrX 95868078 95868109 -70782187 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1316 3941 63 27 11 chrX 95868224 95868750 -70781546 + L1Md_F2 LINE L1 6036 6569 -13 5 1316 27 0 0 0 chrX 95868945 95868972 -70781324 + AT_rich Low_complexity Low_complexity 1 27 0 5 1316 242 356 20 45 chrX 95869068 95869312 -70780984 + L1ME3B LINE L1 5691 5928 -312 5 1316 248 207 45 68 chrX 95869457 95869545 -70780751 + B2_Mm2 SINE B2 101 186 -9 5 1316 1004 273 118 13 chrX 95869572 95870185 -70780111 + L1ME1 LINE L1 3331 4007 -2139 5 1316 589 351 73 25 chrX 95870321 95870596 -70779700 - B4A SINE B4 -3 289 2 5 1316 282 56 0 0 chrX 95870688 95870724 -70779572 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 1316 2951 53 3 8 chrX 95870986 95871364 -70778932 + L1_Mus1 LINE L1 6192 6567 0 5 1316 503 283 26 20 chrX 95871727 95871922 -70778374 + L1ME1 LINE L1 4546 4741 -1405 5 1316 215 348 30 71 chrX 95872062 95872096 -70778200 + B4 SINE B4 58 87 -205 5 1316 310 324 36 18 chrX 95872096 95872206 -70778090 + PB1D10 SINE Alu 1 112 -5 5 1316 227 222 119 60 chrX 95872227 95872294 -70778002 + ID4_ SINE ID 5 75 -8 5 1316 3356 132 38 2 chrX 95872498 95873020 -70777276 + Lx LINE L1 6063 6603 -51 5 1316 2185 74 281 24 chrX 95873015 95873353 -70776943 + L1_Mus1 LINE L1 6142 6565 -1 5 1316 243 70 0 0 chrX 95873354 95873397 -70776899 + Lx LINE L1 6610 6652 -2 5 1316 1827 264 25 41 chrX 95873546 95874110 -70776186 + Lx9 LINE L1 6878 7432 -212 5 1316 441 0 0 0 chrX 95874118 95874167 -70776129 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1316 282 138 111 12 chrX 95874179 95874260 -70776036 + Lx9 LINE L1 7530 7618 -26 5 1316 917 317 50 42 chrX 95874315 95874374 -70775922 + L1ME1 LINE L1 5264 5314 -864 5 1316 4729 134 52 19 chrX 95874374 95875174 -70775122 + Lx2B LINE L1 6169 6995 -5 5 1316 944 317 52 41 chrX 95875174 95875808 -70774488 + L1ME1 LINE L1 5315 5974 -205 5 1316 307 203 0 14 chrX 95875977 95876047 -70774249 + L1M5 LINE L1 5618 5686 -487 5 1316 919 95 21 22 chrX 95876055 95876203 -70774093 + B1_Mur4 SINE Alu 1 142 -8 5 1316 899 293 96 59 chrX 95876279 95876919 -70773377 + MER54A LTR ERVL 7 776 -125 5 1316 450 321 75 46 chrX 95877272 95877445 -70772851 + MER92C LTR ERV1 7 184 -370 5 1316 227 338 15 0 chrX 95877503 95877571 -70772725 + MER92C LTR ERV1 484 552 -2 5 1316 569 231 163 35 chrX 95877572 95877839 -70772457 + L1M4 LINE L1 4742 5045 -1098 5 1316 217 300 42 14 chrX 95877852 95877923 -70772373 + B1F2 SINE Alu 36 108 -41 5 1316 500 215 98 8 chrX 95877955 95878077 -70772219 + URR1B DNA MER1_type 17 149 -76 5 1316 450 214 71 26 chrX 95878079 95878208 -70772088 + B3 SINE B2 74 193 -2 5 1316 1174 288 65 40 chrX 95878263 95878759 -70771537 + L1MB2 LINE L1 5596 6103 -68 5 1316 343 320 54 0 chrX 95878992 95879139 -70771157 + MER119 DNA MER1_type 422 576 -7 5 1316 526 232 27 49 chrX 95879168 95879338 -70770958 + L1M4 LINE L1 5655 5820 -363 5 1316 429 255 84 7 chrX 95879344 95879498 -70770798 + MER110A LTR ERV1 35 200 -268 5 1316 234 229 47 35 chrX 95879641 95879727 -70770569 + MER110A LTR ERV1 284 370 -98 5 1316 1040 47 14 0 chrX 95879765 95879913 -70770383 - L1_Mus3 LINE L1 -4 6634 6485 5 1316 423 0 0 0 chrX 95880299 95880346 -70769950 + (TTATA)n Simple_repeat Simple_repeat 5 51 0 5 1316 1259 132 11 0 chrX 95881049 95881238 -70769058 + B2_Mm1t SINE B2 1 191 -2 5 1316 768 322 12 39 chrX 95881404 95881627 -70768669 + B4A SINE B4 5 220 -72 5 1316 565 251 62 82 chrX 95881627 95881822 -70768474 + B3A SINE B2 1 191 -7 5 1316 359 73 18 0 chrX 95881908 95881963 -70768333 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 1316 318 253 51 0 chrX 95882084 95882163 -70768133 + ID2 SINE ID 1 83 0 6 1316 691 300 109 70 chrX 95882182 95882540 -70767756 + MER34A1 LTR ERV1 65 436 -151 6 1316 2083 123 6 3 chrX 95882896 95883214 -70767082 + ORR1A2 LTR MaLR 1 319 -8 6 1316 10619 138 48 10 chrX 95883219 95884550 -70765746 + ORR1A2-int LTR MaLR 2 1408 -555 6 1316 2806 21 2 205 chrX 95884550 95885037 -70765259 + RLTR10 LTR ERVK 1 388 -2 6 1316 10619 138 48 10 chrX 95885037 95885595 -70764701 + ORR1A2-int LTR MaLR 1409 1963 0 6 1316 1970 109 25 28 chrX 95885595 95885917 -70764379 + ORR1A2 LTR MaLR 1 321 -8 6 1316 447 333 8 8 chrX 95886456 95886574 -70763722 + ID_B1 SINE B4 82 199 -25 6 1316 536 221 13 170 chrX 95886473 95886626 -70763670 + B1F SINE Alu 16 144 -5 6 1316 424 223 30 37 chrX 95886842 95886977 -70763319 + Lx6 LINE L1 7273 7406 -54 6 1316 198 0 0 0 chrX 95886989 95887011 -70763285 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 6 1316 534 329 0 19 chrX 95887686 95887841 -70762455 + MTE2b LTR MaLR 1 152 -227 6 1316 499 324 78 54 chrX 95887695 95887989 -70762307 + MT2A LTR ERVL 10 310 -223 6 1316 517 336 47 66 chrX 95890122 95890393 -70759903 - B4A SINE B4 -16 276 1 6 1316 333 0 0 0 chrX 95890638 95890675 -70759621 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1316 370 318 0 0 chrX 95891146 95891231 -70759065 + PB1 SINE Alu 35 119 -8 6 1316 1186 59 0 0 chrX 95892011 95892147 -70758149 + B1_Mus1 SINE Alu 2 137 -11 6 1316 207 0 0 0 chrX 95892149 95892172 -70758124 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1316 5463 50 0 0 chrX 95892492 95893141 -70757155 + L1Md_F2 LINE L1 5941 6582 0 6 1316 294 335 12 69 chrX 95893175 95893348 -70756948 + RMER4B LTR ERVK 25 187 -398 6 1316 185 102 0 114 chrX 95894295 95894339 -70755957 - L3 LINE CR1 -3554 935 897 6 1316 677 321 106 29 chrX 95894627 95894731 -70755565 + L1M2 LINE L1 2483 2584 -3559 6 1316 207 0 0 0 chrX 95894731 95894754 -70755542 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 6 1316 677 321 106 29 chrX 95894754 95895074 -70755222 + L1M2 LINE L1 2585 2949 -3194 6 1316 1790 106 29 14 chrX 95895074 95895351 -70754945 + L1_Mus3 LINE L1 6358 6638 0 6 1316 677 321 106 29 chrX 95895351 95895522 -70754774 + L1M2 LINE L1 2950 3125 -3018 6 1316 733 194 22 29 chrX 95896047 95896185 -70754111 - RSINE1 SINE B4 -15 150 14 6 1316 799 268 97 36 chrX 95897588 95897919 -70752377 + MLT1A1 LTR MaLR 24 408 0 6 1316 707 204 114 57 chrX 95899395 95899517 -70750779 + Lx7 LINE L1 7367 7486 -210 6 1316 237 33 0 0 chrX 95899517 95899547 -70750749 + (TTG)n Simple_repeat Simple_repeat 2 31 0 6 1316 707 204 114 57 chrX 95899547 95899721 -70750575 + Lx7 LINE L1 7487 7680 -16 6 1316 216 0 0 0 chrX 95900183 95900207 -70750089 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 6 1316 1855 42 0 0 chrX 95901334 95901546 -70748750 + L1Md_T LINE L1 6371 6582 0 6 1316 1650 53 16 0 chrX 95901618 95901808 -70748488 + B2_Mm2 SINE B2 3 195 0 6 1316 284 323 0 48 chrX 95901836 95901940 -70748356 + MIRc SINE MIR 72 170 -98 6 1316 358 290 63 36 chrX 95902080 95902191 -70748105 + PB1D10 SINE Alu 4 117 0 6 1316 206 105 0 50 chrX 95902195 95902235 -70748061 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 6 1316 225 0 0 0 chrX 95902877 95902902 -70747394 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 6 1316 393 22 0 0 chrX 95902906 95902952 -70747344 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 1316 315 49 0 0 chrX 95902952 95902992 -70747304 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1316 343 285 25 157 chrX 95903285 95903324 -70746972 + B4 SINE B4 47 126 -166 6 1316 362 209 8 125 chrX 95903324 95903444 -70746852 + MT2B LTR ERVL 151 256 -345 6 1316 694 185 7 36 chrX 95903351 95903491 -70746805 + B1_Mur2 SINE Alu 14 149 0 6 1316 343 285 25 157 chrX 95903444 95903489 -70746807 + B4 SINE B4 127 223 -69 6 1316 640 294 77 34 chrX 95903744 95903843 -70746453 + ID_B1 SINE B4 1 114 -110 6 1316 2771 65 13 86 chrX 95903843 95904228 -70746068 + IAPEY2_LTR LTR ERVK 1 357 0 6 1316 640 294 77 34 chrX 95904228 95904336 -70745960 + ID_B1 SINE B4 115 217 -7 6 1316 511 243 37 9 chrX 95905170 95905278 -70745018 + B1F1 SINE Alu 1 111 -38 6 1316 1142 153 44 53 chrX 95906955 95907182 -70743114 - URR1B DNA MER1_type 0 225 1 6 1316 182 214 0 45 chrX 95908472 95908516 -70741780 + L2a LINE L2 3124 3165 -261 6 1316 946 157 12 25 chrX 95908557 95908720 -70741576 + B2_Mm2 SINE B2 1 161 -34 6 1316 306 0 0 0 chrX 95908720 95908754 -70741542 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 6 1316 507 294 0 47 chrX 95910280 95910430 -70739866 + RSINE1 SINE B4 4 146 -19 6 1316 23 0 0 0 chrX 95910525 95910548 -70739748 + AT_rich Low_complexity Low_complexity 1 23 0 6 1316 361 269 26 0 chrX 95910881 95910959 -70739337 - ID4 SINE ID -2 81 2 6 1316 271 259 70 12 chrX 95911084 95911170 -70739126 - B1F1 SINE Alu -58 91 1 6 1316 506 187 19 9 chrX 95911425 95911533 -70738763 - L1_Rod LINE L1 -1929 3918 3810 6 1316 3449 39 3 0 chrX 95911536 95911925 -70738371 - L1Md_F2 LINE L1 -12 6570 6181 6 1316 2231 48 88 3 chrX 95911925 95912220 -70738076 + L1Md_F2 LINE L1 5857 6176 -408 6 1316 3648 95 24 6 chrX 95912224 95912721 -70737575 - L1_Mus4 LINE L1 0 6636 6131 6 1316 411 188 29 59 chrX 95912721 95912823 -70737473 - L1_Mur2 LINE L1 -2077 3800 3702 6 1316 195 333 48 0 chrX 95912938 95913001 -70737295 + L2a LINE L2 3316 3381 -45 6 1316 5542 92 2 21 chrX 95913001 95913932 -70736364 + L1_Mur1 LINE L1 2826 3742 -2144 6 1316 22 0 0 0 chrX 95914650 95914672 -70735624 + AT_rich Low_complexity Low_complexity 1 22 0 6 1316 12961 146 23 8 chrX 95914672 95914891 -70735405 + Lx LINE L1 3710 3930 -1953 6 1316 1160 95 0 0 chrX 95914891 95915038 -70735258 + B1_Mus2 SINE Alu 1 147 0 6 1316 12961 130 27 8 chrX 95915038 95917705 -70732591 + Lx LINE L1 3931 6651 -3 6 1316 746 227 8 0 chrX 95918289 95918421 -70731875 + ETnERV2-int LTR ERVK 7070 7202 -204 6 1316 1727 267 64 127 chrX 95918802 95919737 -70730559 + L1MA4 LINE L1 3525 4400 -1447 6 1316 881 126 22 22 chrX 95919753 95919932 -70730364 + GA-rich Low_complexity Low_complexity 2 180 0 6 1316 671 237 308 34 chrX 95919960 95920375 -70729921 + L1MA4 LINE L1 4618 5146 -701 6 1316 423 211 0 0 chrX 95920388 95920483 -70729813 + (TAGA)n Simple_repeat Simple_repeat 2 96 0 6 1316 750 295 52 61 chrX 95920497 95920840 -70729456 + Lx9 LINE L1 6813 7152 -492 6 1316 241 245 133 0 chrX 95920869 95920967 -70729329 + Lx8 LINE L1 7363 7473 0 6 1316 372 94 0 0 chrX 95921259 95921312 -70728984 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1316 211 229 0 0 chrX 95921565 95921613 -70728683 + T-rich Low_complexity Low_complexity 1 48 0 6 1316 251 355 48 8 chrX 95921653 95921778 -70728518 + L1MCb LINE L1 244 373 -6378 6 1316 739 279 51 55 chrX 95921946 95922610 -70727686 + L1MCb LINE L1 825 1563 -5188 6 1316 571 306 102 22 chrX 95922615 95922953 -70727343 + L1MA4 LINE L1 5599 5963 -1510 6 1316 26 30 0 0 chrX 95923132 95923165 -70727131 + AT_rich Low_complexity Low_complexity 1 33 0 6 1316 309 325 32 24 chrX 95923165 95923288 -70727008 - Lx9 LINE L1 -360 7284 7161 6 1316 2044 282 88 8 chrX 95923436 95923668 -70726628 + L1MC2 LINE L1 5052 5301 -845 6 1316 5023 49 14 3 chrX 95923668 95924257 -70726039 + L1Md_F3 LINE L1 5990 6584 0 6 1316 2044 273 97 4 chrX 95924257 95924991 -70725305 + L1MC2 LINE L1 5302 6109 -235 6 1316 246 224 138 0 chrX 95925000 95925058 -70725238 + ID4_ SINE ID 7 72 -11 6 1316 212 250 153 0 chrX 95925058 95925072 -70725224 + ID SINE ID 7 89 -135 6 1316 247 155 172 0 chrX 95925100 95925158 -70725138 + L1MC2 LINE L1 6173 6240 -104 6 1316 275 164 66 0 chrX 95925230 95925291 -70725005 + L1MD2 LINE L1 6285 6349 -10 6 1316 312 267 0 56 chrX 95925476 95925583 -70724713 - ID_B1 SINE B4 -2 222 122 6 1316 28 0 0 0 chrX 95925644 95925672 -70724624 + AT_rich Low_complexity Low_complexity 1 28 0 6 1316 460 268 10 0 chrX 95925675 95925772 -70724524 - B1F SINE Alu -51 98 1 6 1316 1106 278 46 79 chrX 95926151 95926605 -70723691 - MER68 LTR ERVL -8 555 117 6 1316 204 83 0 53 chrX 95927468 95927506 -70722790 + (TTTTTG)n Simple_repeat Simple_repeat 5 40 0 6 1316 262 220 0 149 chrX 95928256 95928299 -70721997 + MT2B LTR ERVL 132 158 -443 6 1316 468 92 0 0 chrX 95928299 95928364 -70721932 + B1_Mur3 SINE Alu 2 66 -83 6 1316 813 103 0 8 chrX 95928387 95928514 -70721782 + Lx LINE L1 6525 6650 -4 6 1316 7803 93 7 13 chrX 95928518 95929825 -70720471 + Lx LINE L1 5357 6654 0 6 1316 213 39 0 0 chrX 95929844 95929870 -70720426 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1316 27 73 0 0 chrX 95929976 95930031 -70720265 + AT_rich Low_complexity Low_complexity 1 55 0 6 1316 987 251 138 51 chrX 95930041 95930352 -70719944 - ORR1D2 LTR MaLR 0 370 33 6 1316 218 191 79 53 chrX 95931238 95931307 -70718989 + MIR SINE MIR 37 114 -154 6 1316 602 255 0 7 chrX 95931325 95931467 -70718829 + B1_Mur1 SINE Alu 1 141 -8 6 1316 241 255 0 0 chrX 95931602 95931649 -70718647 + ID4 SINE ID 8 54 -29 6 1316 298 250 0 13 chrX 95932106 95932183 -70718113 + PB1D10 SINE Alu 42 117 0 6 1316 188 182 21 64 chrX 95932653 95932700 -70717596 - MIRc SINE MIR -112 156 112 6 1316 303 254 15 0 chrX 95933053 95933120 -70717176 + RMER15 LTR ERVL 1 68 -507 6 1316 2129 221 67 88 chrX 95933140 95933720 -70716576 + RMER15 LTR ERVL 8 575 0 6 1316 333 286 57 90 chrX 95934127 95934304 -70715992 + MLT1L LTR MaLR 151 321 -289 6 1316 649 314 61 34 chrX 95934456 95934749 -70715547 + MLT2C2 LTR ERVL 6 306 -158 6 1316 407 290 0 27 chrX 95934769 95934879 -70715417 - Tigger5 DNA MER2_type 0 2406 2300 6 1316 418 267 79 0 chrX 95934920 95935021 -70715275 + PB1D10 SINE Alu 1 109 -8 6 1316 281 279 0 14 chrX 95935038 95935107 -70715189 + BC1_Mm scRNA scRNA 2 69 -83 6 1316 592 360 29 20 chrX 95935118 95935362 -70714934 - Tigger5 DNA MER2_type -2157 249 4 6 1316 449 255 87 24 chrX 95935655 95935862 -70714434 + MIR SINE MIR 32 261 -7 6 1316 5181 62 0 22 chrX 95935903 95936585 -70713711 + L1Md_Gf LINE L1 338 1004 -5518 6 1316 5747 151 2 115 chrX 95936600 95937893 -70712403 + L1Md_F LINE L1 99 1205 -5411 6 1316 6680 68 0 0 chrX 95937899 95938822 -70711474 + L1Md_F LINE L1 1170 2092 -3791 6 1316 18086 44 3 1 chrX 95938823 95942796 -70707500 + L1Md_Gf LINE L1 1 3562 -2324 7 1316 203 88 0 29 chrX 95943622 95943657 -70706639 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 7 1316 180 152 0 0 chrX 95944076 95944109 -70706187 + (TATG)n Simple_repeat Simple_repeat 1 33 0 7 164 2562 280 109 25 chrX 95944109 95945168 -70705128 + Lx9 LINE L1 6318 7466 -178 7 1317 1289 107 16 0 chrX 95945715 95945902 -70704394 + B2_Mm2 SINE B2 4 193 -2 7 1317 485 324 85 19 chrX 95945927 95946138 -70704158 + RMER15 LTR ERVL 337 561 -14 7 1317 225 274 42 127 chrX 95947237 95947379 -70702917 + MT2B LTR ERVL 150 279 -322 7 1317 416 346 0 42 chrX 95947268 95947410 -70702886 + B1F1 SINE Alu 14 149 0 7 1317 981 278 14 5 chrX 95947486 95947703 -70702593 - ID_B1 SINE B4 0 224 6 7 1317 316 286 53 0 chrX 95948085 95948218 -70702078 + L1_Mur3 LINE L1 3199 3338 -2542 7 1317 2167 284 49 21 chrX 95948283 95949002 -70701294 + Lx8 LINE L1 6614 7352 -121 7 1317 307 227 53 0 chrX 95949014 95949089 -70701207 + MTD LTR MaLR 1 79 -340 7 1317 1178 84 0 0 chrX 95949092 95949246 -70701050 + B2_Mm2 SINE B2 3 156 -39 7 1317 1061 108 0 6 chrX 95949246 95949423 -70700873 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 7 1317 1431 50 0 0 chrX 95949434 95949614 -70700682 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 7 1317 227 191 0 41 chrX 95949916 95949938 -70700358 + (CATATA)n Simple_repeat Simple_repeat 5 26 0 7 1317 333 118 0 0 chrX 95949938 95949989 -70700307 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 1317 227 191 0 41 chrX 95949989 95950015 -70700281 + (CATATA)n Simple_repeat Simple_repeat 3 27 0 7 1317 357 316 195 16 chrX 95950994 95951184 -70699112 + RMER15 LTR ERVL 336 559 -16 7 1317 3521 153 30 68 chrX 95951201 95951867 -70698429 - RLTR26 LTR ERVK 0 642 2 7 1317 282 345 58 7 chrX 95951918 95952072 -70698224 + MIRc SINE MIR 17 180 -88 7 1317 396 40 0 0 chrX 95952082 95952132 -70698164 + (GA)n Simple_repeat Simple_repeat 2 51 0 7 1317 442 234 46 99 chrX 95952993 95953145 -70697151 + ID_B1 SINE B4 81 224 0 7 1317 371 307 0 0 chrX 95953168 95953243 -70697053 + ID4 SINE ID 6 80 -3 7 1317 410 287 47 54 chrX 95953821 95953950 -70696346 - LTR41B LTR ERVL -614 144 17 7 1317 198 351 14 0 chrX 95954157 95954231 -70696065 + MIRb SINE MIR 113 187 -81 7 1317 292 258 0 0 chrX 95954679 95954745 -70695551 - ID4_ SINE ID -14 69 4 7 1317 353 360 0 7 chrX 95955064 95955201 -70695095 + MER3 DNA MER1_type 2 137 -72 7 1317 252 343 0 92 chrX 95955181 95955229 -70695067 + B4A SINE B4 48 85 -207 7 1317 315 325 74 41 chrX 95955229 95955351 -70694945 + PB1D10 SINE Alu 1 126 -23 7 1317 328 280 26 61 chrX 95955356 95955470 -70694826 + PB1D10 SINE Alu 1 110 -7 7 1317 898 304 74 25 chrX 95955788 95956152 -70694144 - MLT-int LTR MaLR -5 1730 1349 7 1317 389 70 0 17 chrX 95956631 95956689 -70693607 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1317 549 300 45 26 chrX 95956691 95956845 -70693451 - B3A SINE B2 -41 157 1 7 1317 189 0 0 0 chrX 95956906 95956927 -70693369 + (TG)n Simple_repeat Simple_repeat 2 22 0 7 1317 253 319 0 32 chrX 95956987 95957081 -70693215 - MLT1F-int LTR MaLR -1082 407 317 7 1317 373 266 78 65 chrX 95957086 95957303 -70692993 + Lx8 LINE L1 7254 7473 0 7 1317 625 326 82 26 chrX 95957335 95957678 -70692618 - MLT-int LTR MaLR -1336 399 38 7 1317 265 297 18 9 chrX 95957865 95957977 -70692319 + GA-rich Low_complexity Low_complexity 4 116 0 7 1317 869 319 121 32 chrX 95958486 95958954 -70691342 - MLT2B1 LTR ERVL -6 509 6 7 1317 9512 160 36 14 chrX 95959149 95961136 -70689160 + L1_Mur2 LINE L1 2885 4915 -962 7 1317 1307 251 38 27 chrX 95961178 95961597 -70688699 + Lx5 LINE L1 6456 6881 -579 7 1317 597 101 0 0 chrX 95961606 95961705 -70688591 + (TC)n Simple_repeat Simple_repeat 2 100 0 7 1317 642 217 155 40 chrX 95961707 95961933 -70688363 + Lx5 LINE L1 7181 7432 -28 7 1317 357 203 20 0 chrX 95961991 95962084 -70688212 + L1_Mur2 LINE L1 5045 5146 -731 7 1317 1626 166 65 161 chrX 95962076 95962467 -70687829 + L1_Mur3 LINE L1 5063 5405 -475 7 1317 1273 20 7 0 chrX 95962467 95962614 -70687682 - B1_Mus1 SINE Alu 0 148 1 7 1317 1626 166 65 161 chrX 95962614 95962804 -70687492 + L1_Mur3 LINE L1 5406 5588 -292 7 1317 3666 130 81 3 chrX 95962794 95963436 -70686860 - L1_Mur3 LINE L1 -81 5799 5108 7 1317 2973 143 80 43 chrX 95963436 95964030 -70686266 + RLTR17 LTR ERVK 1 692 0 7 1317 4120 182 25 5 chrX 95964031 95964897 -70685399 - L1_Mur3 LINE L1 -768 5112 4229 7 1317 1279 108 27 0 chrX 95964956 95965142 -70685154 + B2_Mm1a SINE B2 1 191 -2 7 1317 2402 153 58 6 chrX 95965708 95965992 -70684304 - L1_Mur3 LINE L1 -3566 2314 2021 7 1317 456 19 0 0 chrX 95965992 95966045 -70684251 + (TC)n Simple_repeat Simple_repeat 2 54 0 7 1317 243 0 0 0 chrX 95966045 95966071 -70684225 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 1317 2402 153 58 6 chrX 95966071 95966285 -70684011 - L1_Mur3 LINE L1 -3860 2020 1790 7 1317 1969 257 106 6 chrX 95966273 95966927 -70683369 - L1_Mur3 LINE L1 -6737 991 273 7 1317 182 37 0 36 chrX 95967076 95967104 -70683192 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 7 1317 567 83 240 0 chrX 95967254 95967350 -70682946 + B2_Mm2 SINE B2 31 149 -46 7 1317 279 54 0 0 chrX 95967370 95967407 -70682889 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1317 299 263 62 31 chrX 95967526 95967687 -70682609 - L1_Rod LINE L1 -3667 2180 2015 7 1317 2642 124 197 6 chrX 95967704 95968182 -70682114 - RMER4B LTR ERVK 0 585 17 7 1317 481 344 151 64 chrX 95968702 95969199 -70681097 + MLT1H1 LTR MaLR 1 540 -15 7 1317 1603 155 119 41 chrX 95970408 95970736 -70679560 + MTB_Mm-int LTR MaLR 666 998 -260 7 1317 201 26 51 26 chrX 95970736 95970775 -70679521 + (TTA)n Simple_repeat Simple_repeat 2 41 0 7 1317 1603 156 153 49 chrX 95970775 95970860 -70679436 + MTB_Mm-int LTR MaLR 999 1096 -162 7 1317 1136 221 16 24 chrX 95970879 95971134 -70679162 - Lx5 LINE L1 0 7050 6798 7 1317 480 129 227 7 chrX 95971134 95971275 -70679021 + MTB_Mm-int LTR MaLR 1086 1257 -1 7 1317 2283 160 17 31 chrX 95971276 95971689 -70678607 + MTB_Mm LTR MaLR 1 407 0 7 1317 260 323 91 30 chrX 95971986 95972186 -70678110 - MIRc SINE MIR -32 236 28 7 1317 201 74 0 0 chrX 95972544 95972571 -70677725 + (TTGG)n Simple_repeat Simple_repeat 1 27 0 7 1317 303 28 0 0 chrX 95972581 95972617 -70677679 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 7 1317 439 294 0 60 chrX 95972617 95972751 -70677545 - ID_B1 SINE B4 -11 213 88 7 1317 314 302 25 17 chrX 95972796 95972914 -70677382 + L1M5 LINE L1 4401 4519 -1627 7 1317 236 231 0 0 chrX 95972940 95972992 -70677304 + L1MC LINE L1 4598 4649 -1497 7 1317 248 208 19 0 chrX 95972994 95973047 -70677249 + L1M5 LINE L1 4726 4779 -1367 7 1317 489 240 91 0 chrX 95973146 95973300 -70676996 + Lx9 LINE L1 7288 7455 -189 7 1317 378 0 0 0 chrX 95973300 95973342 -70676954 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1317 602 225 0 18 chrX 95973448 95973561 -70676735 + MTC LTR MaLR 196 306 -115 7 1317 3126 196 41 57 chrX 95973612 95974556 -70675740 + L1_Rod LINE L1 4099 5027 -820 7 1317 659 228 234 8 chrX 95974543 95974804 -70675492 + L1_Rod LINE L1 5149 5468 -379 7 1317 814 249 43 16 chrX 95974960 95975144 -70675152 + B3 SINE B2 20 208 -8 7 1317 294 308 105 9 chrX 95975217 95975322 -70674974 + MTEa LTR MaLR 6 120 -259 7 1317 2978 123 20 0 chrX 95975472 95975928 -70674368 - Lx LINE L1 -3 6651 6187 7 1317 275 237 0 0 chrX 95976046 95976105 -70674191 - Lx9 LINE L1 -298 7346 7288 7 1317 1287 219 168 114 chrX 95976397 95976609 -70673687 - RMER2 LTR ERV1 0 567 361 7 1317 213 39 0 0 chrX 95976609 95976635 -70673661 + (GAA)n Simple_repeat Simple_repeat 2 27 0 7 1317 1287 219 168 114 chrX 95976635 95976957 -70673339 - RMER2 LTR ERV1 -207 360 4 7 1317 266 183 16 32 chrX 95977237 95977299 -70672997 + ID_B1 SINE B4 157 217 -7 7 1317 230 314 11 11 chrX 95977457 95977551 -70672745 + MIRb SINE MIR 82 175 -93 7 1317 222 250 62 0 chrX 95977626 95977690 -70672606 + MIRc SINE MIR 70 137 -131 7 1317 395 268 139 0 chrX 95977976 95978170 -70672126 - L1M4 LINE L1 -3239 3405 3185 7 1317 616 255 7 34 chrX 95978190 95978336 -70671960 - B3 SINE B2 -73 143 2 7 1317 2023 189 8 27 chrX 95978380 95978782 -70671514 + ORR1B1 LTR MaLR 1 394 0 7 1317 362 262 100 72 chrX 95978845 95978982 -70671314 - L1M4 LINE L1 -5214 1432 1290 7 1317 1236 104 60 0 chrX 95978982 95979165 -70671131 - B2_Mm2 SINE B2 0 195 2 7 1317 362 261 103 73 chrX 95979165 95979211 -70671085 - L1M4 LINE L1 -5249 1293 1247 7 1317 16567 147 20 15 chrX 95979220 95981207 -70669089 + L1VL4 LINE L1 559 2566 -3317 7 1317 5504 117 28 17 chrX 95981207 95982101 -70668195 + RMER17A2 LTR ERVK 1 904 -2 7 1317 16567 133 20 14 chrX 95982101 95982993 -70667303 + L1VL4 LINE L1 2567 3445 -2438 7 1317 270 0 0 0 chrX 95982993 95983023 -70667273 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 7 1317 16567 133 20 14 chrX 95983023 95983872 -70666424 + L1VL4 LINE L1 3446 4307 -1576 7 1317 2637 226 86 72 chrX 95983875 95984714 -70665582 + RMER19B LTR ERVK 52 902 0 7 1317 1796 195 112 50 chrX 95984714 95985177 -70665119 + ORR1B2-int LTR MaLR 962 1454 -55 7 1317 1656 178 63 29 chrX 95985177 95985525 -70664771 + ORR1B2 LTR MaLR 1 360 -7 7 1317 428 293 13 20 chrX 95985526 95985679 -70664617 - L1M4 LINE L1 -5732 810 659 7 1317 273 216 0 13 chrX 95985907 95985982 -70664314 - Lx7 LINE L1 -20 7676 7603 7 1317 23 0 0 0 chrX 95986160 95986183 -70664113 + AT_rich Low_complexity Low_complexity 1 23 0 7 1317 332 331 13 19 chrX 95986234 95986388 -70663908 - L1M4 LINE L1 -6340 202 50 7 1317 1272 75 0 0 chrX 95986485 95986658 -70663638 - L1_Mm LINE L1 -840 5043 4871 7 1317 315 316 71 46 chrX 95986658 95986854 -70663442 + L1ME4a LINE L1 5717 5917 -207 7 1317 737 236 0 14 chrX 95987193 95987335 -70662961 + B1_Mur1 SINE Alu 10 149 0 7 1317 873 271 27 15 chrX 95987335 95987597 -70662699 - Lx5 LINE L1 -688 6362 6098 7 1317 2143 260 24 34 chrX 95987677 95988259 -70662037 + Lx5 LINE L1 6455 7030 -20 7 1317 371 21 21 0 chrX 95988259 95988307 -70661989 + (GAAAA)n Simple_repeat Simple_repeat 2 50 0 7 1317 1888 145 18 14 chrX 95988309 95988631 -70661665 + ORR1A4 LTR MaLR 38 348 -11 7 1317 214 394 0 0 chrX 95988640 95988651 -70661645 + B4A SINE B4 75 85 -207 7 1317 288 379 32 0 chrX 95988651 95988746 -70661550 + PB1D10 SINE Alu 1 98 -51 7 1317 585 284 9 106 chrX 95988865 95989082 -70661214 + B3A SINE B2 1 196 -2 7 1317 300 295 118 52 chrX 95989194 95989330 -70660966 + ID_B1 SINE B4 80 224 0 7 1317 436 212 6 22 chrX 95989513 95989696 -70660600 + CT-rich Low_complexity Low_complexity 1 180 0 7 1317 435 197 62 16 chrX 95989697 95989826 -70660470 + (TCTCTG)n Simple_repeat Simple_repeat 1 135 0 8 1317 587 180 6 22 chrX 95989827 95990009 -70660287 + CT-rich Low_complexity Low_complexity 1 179 0 8 1317 425 204 51 0 chrX 95990023 95990279 -70660017 + (TCTCTG)n Simple_repeat Simple_repeat 1 269 0 8 1317 491 219 0 6 chrX 95990281 95990460 -70659836 + CT-rich Low_complexity Low_complexity 2 179 0 8 1317 298 165 12 12 chrX 95990471 95990551 -70659745 + CT-rich Low_complexity Low_complexity 1 80 0 8 1317 189 0 0 0 chrX 95990583 95990604 -70659692 + (TG)n Simple_repeat Simple_repeat 2 22 0 8 1317 511 196 0 11 chrX 95990659 95990834 -70659462 + CT-rich Low_complexity Low_complexity 2 174 0 8 1317 204 67 0 0 chrX 95990865 95990895 -70659401 + (TCTG)n Simple_repeat Simple_repeat 1 30 0 8 1317 309 296 62 90 chrX 95991107 95991285 -70659011 - L1M4c LINE L1 -5667 717 545 8 1317 1664 191 133 11 chrX 95991313 95991688 -70658608 - Lx9 LINE L1 -716 6928 6508 8 1317 332 282 126 24 chrX 95991740 95991907 -70658389 + L1M4c LINE L1 362 545 -5839 8 1317 293 220 58 39 chrX 95991915 95992019 -70658277 + Lx8 LINE L1 7368 7473 0 8 1317 1141 289 61 45 chrX 95992606 95993013 -70657283 + MTEa LTR MaLR 1 419 -2 8 1317 1716 167 34 124 chrX 95993280 95993691 -70656605 - ORR1D1 LTR MaLR 0 374 1 8 1317 260 310 0 54 chrX 95994141 95994233 -70656063 - RMER30 DNA MER1_type -2 200 114 8 1317 23 78 0 0 chrX 95994504 95994555 -70655741 + AT_rich Low_complexity Low_complexity 1 51 0 8 1317 605 277 50 12 chrX 95994617 95994778 -70655518 + MTEa LTR MaLR 12 178 -201 8 1317 1988 238 34 59 chrX 95994802 95995353 -70654943 + RMER19C LTR ERVK 1 609 -2 8 1317 311 266 230 35 chrX 95995353 95995529 -70654767 + MTEa LTR MaLR 189 377 -2 8 1317 227 307 129 0 chrX 95995531 95995632 -70654664 - MIR SINE MIR -118 144 31 8 1317 29 70 0 0 chrX 95996018 95996075 -70654221 + AT_rich Low_complexity Low_complexity 1 57 0 8 1317 4209 192 38 34 chrX 95996075 95996980 -70653316 + RMER13B LTR ERVK 1 908 0 8 1317 670 319 5 37 chrX 95996994 95997212 -70653084 - ID_B1 SINE B4 -9 215 5 8 1317 358 316 0 0 chrX 95997260 95997336 -70652960 + PB1D10 SINE Alu 1 76 -41 8 1317 333 285 145 48 chrX 95997336 95997502 -70652794 + B3A SINE B2 1 182 -16 8 1317 222 340 14 39 chrX 95997502 95997610 -70652686 + PB1D10 SINE Alu 64 116 -1 8 1317 521 234 26 26 chrX 95997879 95997993 -70652303 - B1_Mur1 SINE Alu -5 144 31 8 1317 198 0 0 0 chrX 95997993 95998015 -70652281 + (TTAAA)n Simple_repeat Simple_repeat 4 25 0 8 1317 185 286 0 100 chrX 95998759 95998829 -70651467 - L3 LINE CR1 -1048 3441 3379 8 1317 1727 127 33 30 chrX 95999667 96000000 -70650296 - Lx4A LINE L1 -2 7056 6723 8 1317 2715 102 22 5 chrX 96000000 96000412 -70649884 - Lx4A LINE L1 -336 6722 6304 1 1317 8067 99 48 14 chrX 96000409 96000998 -70649298 - L1_Mur2 LINE L1 -3213 2664 2067 2 1317 297 51 0 0 chrX 96000998 96001037 -70649259 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1317 8067 103 41 20 chrX 96001037 96002327 -70647969 - L1_Mur2 LINE L1 -3811 2066 737 2 1317 228 135 0 0 chrX 96002930 96002967 -70647329 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 4 1317 369 211 0 133 chrX 96002969 96003089 -70647207 + MT2B LTR ERVL 154 257 -344 5 1317 787 196 20 20 chrX 96002986 96003132 -70647164 + B1_Mur3 SINE Alu 2 147 -2 6 1317 473 237 35 0 chrX 96003778 96003892 -70646404 + RLTR42-int LTR ERVK 4445 4562 -960 7 1317 1052 50 65 0 chrX 96004123 96004262 -70646034 - B1_Mus1 SINE Alu 0 148 1 8 1317 247 303 0 73 chrX 96004858 96004940 -70645356 - B3 SINE B2 -68 148 73 9 1317 4089 59 0 8 chrX 96004944 96005455 -70644841 + L1_Mus1 LINE L1 6061 6567 0 1 1317 662 178 25 13 chrX 96005466 96005625 -70644671 + L1_Mur3 LINE L1 1376 1536 -4344 1 1317 234 0 0 0 chrX 96005626 96005652 -70644644 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1317 263 204 138 11 chrX 96005678 96005772 -70644524 + Lx4A LINE L1 6936 7041 -17 1 1317 3963 154 56 11 chrX 96005796 96006605 -70643691 + L1_Mur3 LINE L1 2175 3019 -2861 1 1317 2171 90 0 3 chrX 96006602 96006925 -70643371 - L1_Mm LINE L1 -1354 4529 4208 1 1317 234 0 0 0 chrX 96006925 96006951 -70643345 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 1317 2072 171 38 10 chrX 96007004 96007399 -70642897 - Lx LINE L1 -4 6650 6245 1 1317 1469 173 76 10 chrX 96007408 96007712 -70642584 + RLTR13B1 LTR ERVK 1 324 -569 1 1317 1849 178 20 18 chrX 96007714 96008057 -70642239 - RMER4A LTR ERVK -117 349 6 1 1317 2311 217 114 35 chrX 96008066 96008782 -70641514 + Lx7 LINE L1 6923 7695 -1 1 1317 603 256 55 16 chrX 96008838 96009021 -70641275 + B3 SINE B2 27 216 0 2 1317 362 276 115 31 chrX 96009042 96009460 -70640836 + L1M4 LINE L1 2345 2797 -3349 2 1317 752 265 73 11 chrX 96009465 96009751 -70640545 + L1MC LINE L1 5018 5321 -825 2 1317 394 229 64 0 chrX 96009778 96009887 -70640409 + L1MC LINE L1 5490 5605 -728 2 1317 493 269 30 8 chrX 96009889 96010020 -70640276 + B1F SINE Alu 1 134 -15 2 1317 23 0 0 0 chrX 96010023 96010046 -70640250 + AT_rich Low_complexity Low_complexity 1 23 0 2 1317 505 223 0 0 chrX 96010113 96010207 -70640089 + U6 snRNA snRNA 1 94 -13 2 1317 1111 81 0 20 chrX 96010343 96010494 -70639802 + B1_Mus1 SINE Alu 1 148 0 2 1317 2309 166 16 38 chrX 96010594 96011100 -70639196 - L1_Mur2 LINE L1 -2777 3100 2606 2 1317 518 261 131 108 chrX 96011973 96012363 -70637933 - Charlie1a DNA MER1_type -73 1382 984 2 1317 250 344 31 39 chrX 96012360 96012490 -70637806 - MLT1A1 LTR MaLR -10 398 270 2 1317 511 264 59 107 chrX 96012795 96012982 -70637314 - Charlie1a DNA MER1_type -470 985 808 2 1317 495 275 27 40 chrX 96013007 96013155 -70637141 + B3A SINE B2 49 194 -4 3 1317 239 323 21 0 chrX 96013368 96013464 -70636832 - Lx8 LINE L1 -227 7246 7149 3 1317 383 340 48 0 chrX 96013610 96013713 -70636583 - B1_Mur2 SINE Alu -29 120 13 3 1317 262 362 42 25 chrX 96013713 96013729 -70636567 - ID_B1 SINE B4 -26 198 78 3 1317 399 284 71 4 chrX 96013774 96014029 -70636267 + L1M4 LINE L1 4947 5218 -928 3 1317 1548 151 4 4 chrX 96014110 96014376 -70635920 + L1VL1 LINE L1 1 266 -6156 3 1317 1349 144 140 4 chrX 96014376 96014647 -70635649 + L1Md_F LINE L1 383 690 -5829 3 1317 5006 65 0 1 chrX 96014647 96015329 -70634967 + L1_Mm LINE L1 4623 5303 -580 3 1317 17388 17 1 0 chrX 96015329 96017433 -70632863 + L1Md_F2 LINE L1 3481 5586 -297 3 1317 8020 52 1 0 chrX 96017433 96018415 -70631881 + L1Md_F2 LINE L1 5587 6569 -13 3 1317 33 0 0 0 chrX 96018415 96018448 -70631848 + AT_rich Low_complexity Low_complexity 1 33 0 3 1317 21 0 0 0 chrX 96019167 96019188 -70631108 + AT_rich Low_complexity Low_complexity 1 21 0 4 1317 2515 253 45 107 chrX 96019482 96020645 -70629651 + Lx8 LINE L1 4701 5791 -89 4 1317 549 275 29 23 chrX 96020818 96020993 -70629303 + Lx8 LINE L1 5784 5959 -1514 4 1317 2000 163 8 65 chrX 96020996 96021397 -70628899 - ORR1C1 LTR MaLR 0 378 1 4 1317 5117 209 54 36 chrX 96021397 96022743 -70627553 - ORR1C1-int LTR MaLR 0 1370 1 4 1317 679 181 232 5 chrX 96022743 96022957 -70627339 - ORR1C1 LTR MaLR -113 265 3 4 1317 2217 298 31 13 chrX 96022980 96023681 -70626615 + Lx8 LINE L1 6316 7029 -444 4 1317 298 283 45 36 chrX 96024112 96024222 -70626074 - PB1D10 SINE Alu -6 111 1 4 1317 2162 271 69 60 chrX 96025089 96026017 -70624279 + Lx5 LINE L1 5783 7102 -358 4 1317 1121 95 0 0 chrX 96026845 96026992 -70623304 + B1_Mus2 SINE Alu 1 147 0 4 1317 255 290 137 20 chrX 96027344 96027446 -70622850 + PB1D10 SINE Alu 3 116 -1 4 1317 288 221 135 16 chrX 96028453 96028582 -70621714 + L1MB8 LINE L1 5981 6118 -66 4 1317 514 242 80 31 chrX 96028594 96028756 -70621540 - B4A SINE B4 -117 175 6 4 1317 2007 182 101 16 chrX 96028797 96029222 -70621074 + MT2A LTR ERVL 1 461 -72 4 1317 487 146 0 0 chrX 96029225 96029314 -70620982 - L1_Mm LINE L1 -1167 4716 4628 5 1317 3227 42 0 0 chrX 96029314 96029700 -70620596 + L1_Mus1 LINE L1 6181 6566 -1 5 1317 287 273 0 13 chrX 96030198 96030276 -70620020 + MIR SINE MIR 149 225 -37 5 1317 406 284 55 9 chrX 96030432 96030541 -70619755 + PB1D10 SINE Alu 15 129 -19 5 1317 367 269 186 28 chrX 96030548 96030878 -70619418 + L1MC LINE L1 3712 4102 -2044 5 1317 537 224 14 63 chrX 96030933 96031076 -70619220 + B3 SINE B2 81 216 0 5 1317 489 232 0 14 chrX 96031155 96031263 -70619033 - B1F2 SINE Alu -12 105 3 5 1317 1393 181 193 22 chrX 96031314 96031682 -70618614 + MER57C2 LTR ERV1 4 434 0 5 1317 1404 40 22 6 chrX 96031805 96031983 -70618313 - B2_Mm2 SINE B2 -14 181 1 5 1317 319 194 30 0 chrX 96032016 96032083 -70618213 - Charlie5 DNA MER1_type -2534 90 22 5 1317 4019 83 6 0 chrX 96032320 96032849 -70617447 - L1_Mus2 LINE L1 -1 6565 6034 6 1317 9726 80 2 6 chrX 96032849 96034431 -70615865 + L1_Mus2 LINE L1 4450 6025 -541 6 1317 385 224 79 0 chrX 96034988 96035064 -70615232 + RSINE1 SINE B4 31 112 -53 6 1317 1123 43 0 0 chrX 96035081 96035219 -70615077 - B2_Mm1t SINE B2 -55 138 1 6 1317 226 322 101 14 chrX 96035451 96035667 -70614629 - MIRb SINE MIR -4 264 25 6 1317 296 291 12 25 chrX 96035720 96035801 -70614495 + ID4 SINE ID 2 81 -2 6 1317 277 380 20 10 chrX 96035801 96035821 -70614475 + ID_B1 SINE B4 2 103 -121 6 1317 232 214 18 0 chrX 96036115 96036171 -70614125 + Kanga11a DNA Tc2 19 75 -895 6 1317 985 32 0 8 chrX 96036305 96036430 -70613866 + B1_Mus1 SINE Alu 24 147 -1 6 1317 970 204 19 33 chrX 96036578 96036791 -70613505 + B3 SINE B2 1 210 -6 6 1317 698 269 82 44 chrX 96037060 96037448 -70612848 + L1MB4 LINE L1 44 446 -6161 6 1317 330 252 159 0 chrX 96037915 96038022 -70612274 + L1MB4 LINE L1 1064 1187 -5562 6 1317 2432 164 111 35 chrX 96038067 96038635 -70611661 + Lx7 LINE L1 6807 7417 -279 7 1317 1209 188 86 77 chrX 96038635 96039068 -70611228 - MT2A LTR ERVL 0 601 19 7 1317 393 75 0 0 chrX 96039070 96039123 -70611173 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 1317 260 281 174 9 chrX 96039128 96039340 -70610956 + Lx7 LINE L1 7449 7695 -1 7 1317 281 288 76 28 chrX 96039539 96039750 -70610546 + L1MB4 LINE L1 1165 1385 -5222 6 1317 270 122 23 58 chrX 96039751 96039838 -70610458 + (TA)n Simple_repeat Simple_repeat 2 85 0 7 1317 361 221 60 103 chrX 96039942 96040058 -70610238 + MT2B LTR ERVL 168 278 -323 7 1317 817 125 0 15 chrX 96039956 96040086 -70610210 + B1_Mus2 SINE Alu 19 146 -1 7 1317 691 152 29 0 chrX 96040110 96040248 -70610048 + GA-rich Low_complexity Low_complexity 1 142 0 7 1317 391 265 194 56 chrX 96040365 96040525 -70609771 + B3A SINE B2 2 183 -15 7 1317 485 224 98 12 chrX 96040565 96040728 -70609568 + L1MB4 LINE L1 1788 1964 -4785 6 1317 654 254 0 0 chrX 96040880 96041010 -70609286 + B1_Mur1 SINE Alu 2 131 -18 7 1317 2249 210 77 6 chrX 96041203 96041721 -70608575 + Lx9 LINE L1 6362 6916 -728 7 1317 658 124 68 34 chrX 96041727 96041844 -70608452 - RMER19A LTR ERVK -199 538 418 8 1317 1206 258 19 33 chrX 96041856 96042217 -70608079 + Lx9 LINE L1 6962 7317 -327 7 1317 254 260 38 38 chrX 96042309 96042441 -70607855 + Lx9 LINE L1 7465 7596 -48 7 1317 256 250 0 0 chrX 96042517 96042565 -70607731 + polypurine Low_complexity Low_complexity 3 50 0 8 1317 403 316 30 130 chrX 96042573 96042628 -70607668 + ID SINE ID 23 69 -155 8 1317 4869 103 40 3 chrX 96042628 96043337 -70606959 - RMER19A LTR ERVK -2 735 1 8 1317 403 316 30 130 chrX 96043337 96043361 -70606935 + ID SINE ID 70 82 -142 8 1317 475 328 24 0 chrX 96043361 96043486 -70606810 + B1_Mur2 SINE Alu 2 129 -20 8 1317 24 0 0 0 chrX 96043563 96043587 -70606709 + AT_rich Low_complexity Low_complexity 1 24 0 8 1317 274 276 149 0 chrX 96045126 96045213 -70605083 - PB1D7 SINE Alu -2 118 19 8 1317 211 253 88 28 chrX 96045226 96045364 -70604932 - MIRb SINE MIR -109 167 26 8 1317 368 291 41 90 chrX 96045525 96045610 -70604686 + L1MD2 LINE L1 5080 5151 -995 8 1317 1056 219 29 5 chrX 96045610 96045816 -70604480 + B3 SINE B2 1 211 -5 8 1317 368 291 41 90 chrX 96045816 96045998 -70604298 + L1MD2 LINE L1 5152 5334 -812 8 1317 796 289 87 28 chrX 96046045 96046550 -70603746 + L1MD2 LINE L1 5446 5980 -379 8 1317 22 35 0 0 chrX 96046564 96046593 -70603703 + AT_rich Low_complexity Low_complexity 1 29 0 9 1317 684 115 0 0 chrX 96047537 96047641 -70602655 + (GGGA)n Simple_repeat Simple_repeat 2 105 0 9 1317 216 0 0 0 chrX 96047842 96047866 -70602430 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 9 1317 1574 116 4 0 chrX 96048060 96048285 -70602011 - URR1A DNA MER1_type 0 226 1 9 1317 287 333 130 0 chrX 96048353 96048461 -70601835 + B1F SINE Alu 21 142 -7 9 1317 481 188 0 0 chrX 96048571 96048667 -70601629 + RMER1B Other Other 962 1057 -9 9 1317 355 208 35 123 chrX 96048669 96048839 -70601457 + L1_Rod LINE L1 2669 2823 -3024 9 1317 205 257 137 41 chrX 96049035 96049108 -70601188 + MIR3 SINE MIR 81 160 -48 9 1317 350 307 143 45 chrX 96049380 96049452 -70600844 + ID SINE ID 2 86 -138 9 1317 272 261 62 70 chrX 96049452 96049547 -70600749 + B1F2 SINE Alu 3 98 -22 9 1317 770 151 21 28 chrX 96049649 96049792 -70600504 + B1_Mus1 SINE Alu 1 142 -6 1 1317 4500 41 0 2 chrX 96049800 96050336 -70599960 + L1_Mus1 LINE L1 6033 6567 0 1 1317 766 190 6 11 chrX 96050362 96050538 -70599758 + GA-rich Low_complexity Low_complexity 4 178 0 1 1317 236 213 0 16 chrX 96050561 96050623 -70599673 + GA-rich Low_complexity Low_complexity 4 64 0 1 1317 447 19 0 0 chrX 96050689 96050741 -70599555 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 1317 297 0 0 0 chrX 96050741 96050773 -70599523 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1317 21 36 0 0 chrX 96051971 96051999 -70598297 + AT_rich Low_complexity Low_complexity 1 28 0 1 1317 237 65 0 0 chrX 96052013 96052044 -70598252 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1 1317 700 268 62 10 chrX 96052208 96052279 -70598017 + ID SINE ID 1 81 -143 1 1317 337 313 29 44 chrX 96052279 96052416 -70597880 + B1F1 SINE Alu 1 135 -14 1 1317 282 168 23 0 chrX 96052596 96052661 -70597635 + MTEa LTR MaLR 5 71 -308 1 1317 662 252 63 24 chrX 96052827 96053034 -70597262 + B3 SINE B2 2 216 0 1 1317 968 256 139 41 chrX 96053320 96053895 -70596401 + L1M3 LINE L1 4359 4998 -1142 1 1317 275 313 0 24 chrX 96053895 96053980 -70596316 + ID2 SINE ID 1 83 0 1 1317 968 256 139 41 chrX 96053980 96054014 -70596282 + L1M3 LINE L1 4999 5028 -1112 1 1317 576 306 40 30 chrX 96054323 96054522 -70595774 + RMER15 LTR ERVL 375 575 0 1 1317 347 244 12 0 chrX 96054643 96054729 -70595567 + ID SINE ID 2 88 -136 1 1317 252 304 0 0 chrX 96055050 96055119 -70595177 + ID4 SINE ID 2 70 -13 1 1317 394 276 10 57 chrX 96055155 96055347 -70594949 + L1MC5 LINE L1 7729 7911 -50 1 1317 261 213 32 32 chrX 96056604 96056667 -70593629 + ID4 SINE ID 19 81 -2 1 1317 302 317 62 48 chrX 96056611 96056757 -70593539 + ID_B1 SINE B4 29 176 -48 1 1317 256 318 0 23 chrX 96056694 96056767 -70593529 + PB1D7 SINE Alu 36 107 -13 1 1317 198 0 0 0 chrX 96056767 96056789 -70593507 + (TAAAA)n Simple_repeat Simple_repeat 5 26 0 1 1317 256 318 0 23 chrX 96056789 96056802 -70593494 + PB1D7 SINE Alu 108 120 0 1 1317 182 65 0 61 chrX 96056953 96056986 -70593310 + (GAAAA)n Simple_repeat Simple_repeat 4 34 0 1 1317 244 265 39 39 chrX 96057237 96057339 -70592957 + PB1D10 SINE Alu 1 102 -15 1 1317 26 30 0 0 chrX 96057347 96057380 -70592916 + AT_rich Low_complexity Low_complexity 1 33 0 1 1317 1179 299 110 11 chrX 96057851 96058415 -70591881 + L1MB2 LINE L1 5551 6170 -1 1 1317 630 273 25 70 chrX 96058424 96058573 -70591723 + B3A SINE B2 1 152 -46 1 1317 237 108 0 0 chrX 96058573 96058610 -70591686 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1317 2652 127 40 5 chrX 96058610 96059013 -70591283 - MTC LTR MaLR 0 421 5 1 1317 630 273 25 70 chrX 96059013 96059033 -70591263 + B3A SINE B2 153 163 -35 1 1317 1860 156 3 13 chrX 96059033 96059344 -70590952 + RLTR10E LTR ERVK 1 308 -3 1 1317 630 273 25 70 chrX 96059344 96059373 -70590923 + B3A SINE B2 164 190 -8 1 1317 213 263 22 97 chrX 96059508 96059635 -70590661 + MIRc SINE MIR 72 186 -82 1 1317 544 143 318 0 chrX 96059700 96059826 -70590470 + URR1A DNA MER1_type 1 166 -60 1 1317 4584 93 86 29 chrX 96059826 96060592 -70589704 + RMER21B LTR ERV1 1 810 -32 1 1317 436 175 164 16 chrX 96060571 96060699 -70589597 + B2_Mm2 SINE B2 44 190 -5 1 1317 1190 143 47 21 chrX 96061000 96061236 -70589060 + RMER19B LTR ERVK 661 902 0 1 1317 248 300 65 22 chrX 96061458 96061550 -70588746 - BC1_Mm scRNA scRNA -53 99 4 1 1317 320 259 59 0 chrX 96061578 96061663 -70588633 - ID_B1 SINE B4 -20 204 115 1 1317 443 218 0 141 chrX 96061733 96061861 -70588435 - PB1D10 SINE Alu -2 115 6 1 1317 207 0 0 0 chrX 96061905 96061928 -70588368 + (CTG)n Simple_repeat Simple_repeat 1 23 0 1 1317 612 142 85 0 chrX 96062261 96062367 -70587929 + B3 SINE B2 2 116 -100 1 1317 251 274 56 120 chrX 96062427 96062535 -70587761 + PB1D7 SINE Alu 18 118 -2 1 1317 456 296 7 7 chrX 96062543 96062689 -70587607 + ID_B1 SINE B4 78 223 -1 1 1317 294 269 48 60 chrX 96064387 96064470 -70585826 + ID_B1 SINE B4 14 95 -129 1 1317 481 289 27 31 chrX 96064601 96064814 -70585482 + B4A SINE B4 21 224 0 1 1317 261 250 0 27 chrX 96064840 96064914 -70585382 + B4A SINE B4 189 260 -32 1 1317 1221 106 0 0 chrX 96065663 96065843 -70584453 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 1 1317 693 217 41 14 chrX 96066586 96066731 -70583565 - B1F1 SINE Alu 0 149 1 1 1317 1007 272 108 30 chrX 96066741 96067234 -70583062 + L1MA5 LINE L1 5765 6295 -5 1 1317 360 0 0 0 chrX 96067393 96067433 -70582863 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1317 369 203 0 0 chrX 96068394 96068468 -70581828 - ID4 SINE ID -2 81 8 1 1317 198 323 129 20 chrX 96068678 96068779 -70581517 + MIRb SINE MIR 109 220 -48 1 1317 241 176 163 12 chrX 96068804 96068890 -70581406 + Lx8 LINE L1 7373 7471 -2 1 1317 206 79 0 50 chrX 96069151 96069191 -70581105 + (CAAAAA)n Simple_repeat Simple_repeat 6 43 0 1 1317 215 279 16 0 chrX 96069710 96069771 -70580525 + GA-rich Low_complexity Low_complexity 2 63 0 1 1317 231 260 191 55 chrX 96069771 96069881 -70580415 + PB1 SINE Alu 1 125 -2 1 1317 237 43 42 21 chrX 96071156 96071204 -70579092 + (CAAAAA)n Simple_repeat Simple_repeat 1 49 0 1 1317 622 238 378 22 chrX 96071317 96071653 -70578643 - L1MB7 LINE L1 -30 6154 5701 1 1317 671 119 8 0 chrX 96071653 96071779 -70578517 + (TG)n Simple_repeat Simple_repeat 2 128 0 1 1317 388 253 199 57 chrX 96071779 96072039 -70578257 - L1MB7 LINE L1 -484 5700 5393 1 1317 439 233 44 0 chrX 96072068 96072158 -70578138 - RSINE1 SINE B4 -63 102 9 1 1317 213 232 18 0 chrX 96072178 96072234 -70578062 + (TTTG)n Simple_repeat Simple_repeat 4 60 0 1 1317 339 25 0 0 chrX 96072236 96072276 -70578020 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1317 308 271 97 0 chrX 96072480 96072598 -70577698 - B1F SINE Alu -14 135 1 1 1317 1049 115 14 0 chrX 96072663 96072811 -70577485 + B1_Mur4 SINE Alu 1 150 0 1 1317 202 61 61 0 chrX 96072811 96072844 -70577452 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 1 1317 779 167 72 84 chrX 96072864 96073113 -70577183 - Lx7 LINE L1 -4 7692 7447 1 1317 289 0 24 24 chrX 96073128 96073170 -70577126 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1317 1182 212 64 58 chrX 96073170 96073320 -70576976 - Lx7 LINE L1 -372 7324 7174 1 1317 6206 4 0 0 chrX 96073320 96073996 -70576300 + L1Md_A LINE L1 5907 6582 0 1 1317 1182 212 64 58 chrX 96073996 96074156 -70576140 - Lx7 LINE L1 -523 7173 7012 1 1317 297 222 0 47 chrX 96074188 96074273 -70576023 - ID4 SINE ID -1 82 2 1 1317 635 229 76 7 chrX 96074337 96074482 -70575814 + RSINE1 SINE B4 5 159 -6 1 1317 554 247 84 61 chrX 96074501 96074701 -70575595 - L1MB7 LINE L1 -1710 4436 4232 1 1317 1428 131 18 0 chrX 96074701 96074922 -70575374 + URR1B DNA MER1_type 1 225 0 1 1317 554 247 84 61 chrX 96074922 96075018 -70575278 - L1MB7 LINE L1 -1915 4231 4133 1 1317 346 240 141 30 chrX 96075553 96075652 -70574644 - PB1D10 SINE Alu -5 112 3 1 1318 355 324 213 0 chrX 96075937 96076125 -70574171 + B4A SINE B4 1 228 -64 1 1318 564 258 6 47 chrX 96076125 96076296 -70574000 + RSINE1 SINE B4 2 165 0 1 1318 230 290 0 0 chrX 96076342 96076404 -70573892 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 1318 212 226 0 0 chrX 96076428 96076481 -70573815 + PB1D10 SINE Alu 65 117 0 1 1318 367 288 9 18 chrX 96076748 96076861 -70573435 + L2b LINE L2 3264 3375 0 1 1318 206 95 24 0 chrX 96077681 96077723 -70572573 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 1 1318 266 295 52 35 chrX 96077735 96077851 -70572445 - MIR3 SINE MIR -31 177 60 1 1318 1379 238 49 14 chrX 96078132 96078497 -70571799 + MTE2b LTR MaLR 2 370 0 1 1318 469 277 38 15 chrX 96078512 96078644 -70571652 - ID_B1 SINE B4 -6 218 84 1 1318 717 217 0 0 chrX 96078668 96078806 -70571490 - ID_B1 SINE B4 -5 219 82 1 1318 366 279 0 0 chrX 96079351 96079430 -70570866 + ID4 SINE ID 4 82 -1 1 1318 318 284 107 10 chrX 96079471 96079574 -70570722 + PB1D10 SINE Alu 5 117 0 1 1318 274 268 95 10 chrX 96080002 96080129 -70570167 - B1F SINE Alu -5 144 3 1 1318 237 323 151 35 chrX 96080154 96080353 -70569943 + MER58B DNA MER1_type 117 338 -3 1 1318 376 275 0 0 chrX 96080374 96080465 -70569831 + PB1D10 SINE Alu 1 91 -26 1 1318 538 297 14 0 chrX 96080480 96080618 -70569678 + B1F SINE Alu 5 144 -5 1 1318 408 111 0 0 chrX 96080618 96080681 -70569615 + (GA)n Simple_repeat Simple_repeat 1 63 0 1 1318 428 275 48 34 chrX 96080706 96080853 -70569443 + B1F1 SINE Alu 1 149 0 1 1318 207 0 50 50 chrX 96080929 96080969 -70569327 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 1 1318 423 38 0 0 chrX 96081655 96081708 -70568588 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1318 1023 221 192 9 chrX 96081911 96082254 -70568042 - MTD LTR MaLR 0 419 14 1 1318 893 154 6 0 chrX 96082254 96082416 -70567880 + GA-rich Low_complexity Low_complexity 3 165 0 1 1318 208 244 64 0 chrX 96082830 96082908 -70567388 - MIRc SINE MIR -16 252 170 1 1318 211 220 40 0 chrX 96083159 96083209 -70567087 - MIRc SINE MIR -189 79 28 1 1318 339 265 30 20 chrX 96083650 96083750 -70566546 + PB1D10 SINE Alu 17 117 0 1 1318 1080 75 7 14 chrX 96087175 96087323 -70562973 - B1_Mus1 SINE Alu 0 148 2 1 1318 1153 88 0 0 chrX 96087348 96087495 -70562801 - B1_Mus1 SINE Alu 0 148 2 1 1318 1142 82 7 0 chrX 96087522 96087669 -70562627 - B1_Mus1 SINE Alu 0 148 1 1 1318 1142 278 94 14 chrX 96087673 96088097 -70562199 - MLT1D LTR MaLR -45 460 3 1 1318 503 209 76 0 chrX 96088136 96088241 -70562055 + B1_Mur1 SINE Alu 3 115 -34 1 1318 320 300 57 20 chrX 96088283 96088449 -70561847 - MIRb SINE MIR -79 189 12 1 1318 332 77 29 44 chrX 96088463 96088531 -70561765 + L1_Mus3 LINE L1 6572 6638 0 1 1318 821 114 0 8 chrX 96088545 96088678 -70561618 + (GAAA)n Simple_repeat Simple_repeat 1 132 0 2 1318 290 268 12 12 chrX 96088866 96088949 -70561347 - ID4 SINE ID 0 83 1 2 1318 393 264 8 76 chrX 96089054 96089173 -70561123 - B1F1 SINE Alu 0 117 7 2 1318 407 279 65 24 chrX 96089312 96089558 -70560738 - Charlie2b DNA MER1_type -280 2502 2247 2 1318 210 71 0 0 chrX 96089560 96089588 -70560708 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 1318 326 23 23 0 chrX 96089594 96089637 -70560659 + (CTA)n Simple_repeat Simple_repeat 3 46 0 2 1318 535 267 37 8 chrX 96089878 96090015 -70560281 + B3A SINE B2 18 157 -41 2 1318 357 62 0 0 chrX 96090015 96090063 -70560233 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1318 369 0 0 0 chrX 96090063 96090103 -70560193 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1318 448 296 38 38 chrX 96090103 96090122 -70560174 + B3 SINE B2 157 174 -42 2 1318 290 185 19 0 chrX 96090361 96090415 -70559881 + ID4_ SINE ID 18 72 -11 2 1318 576 231 68 32 chrX 96090888 96091014 -70559282 - Lx7 LINE L1 0 7696 7563 2 1318 1734 26 0 0 chrX 96091014 96091207 -70559089 + B2_Mm1t SINE B2 1 193 0 2 1318 576 231 68 32 chrX 96091207 96091299 -70558997 - Lx7 LINE L1 -134 7562 7470 2 1318 379 134 0 24 chrX 96091303 96091387 -70558909 + GA-rich Low_complexity Low_complexity 2 83 0 2 1318 4380 187 46 58 chrX 96091457 96091779 -70558517 - Lx7 LINE L1 -284 7412 7106 2 1318 333 0 0 0 chrX 96091779 96091816 -70558480 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1318 4380 187 46 58 chrX 96091816 96092407 -70557889 - Lx7 LINE L1 -591 7105 6510 2 1318 951 213 28 141 chrX 96092392 96092753 -70557543 - Lx7 LINE L1 -1465 6231 5912 2 1318 180 390 20 0 chrX 96093368 96093468 -70556828 - MIR SINE MIR -70 192 91 2 1318 213 39 0 0 chrX 96094074 96094100 -70556196 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 1318 1113 89 0 0 chrX 96094101 96094259 -70556037 - B2_Mm2 SINE B2 -37 158 1 2 1318 437 153 0 0 chrX 96094314 96094386 -70555910 + PB1 SINE Alu 42 113 -14 2 1318 324 0 0 0 chrX 96094452 96094488 -70555808 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1318 316 280 13 0 chrX 96094495 96094570 -70555726 - ID4_ SINE ID -1 82 7 2 1318 235 301 138 55 chrX 96094604 96094713 -70555583 - RSINE1 SINE B4 -25 140 23 2 1318 4320 84 15 5 chrX 96094735 96095332 -70554964 - Lx3_Mus LINE L1 -8 7001 6399 2 1318 10377 70 16 69 chrX 96095332 96097047 -70553249 + Lx3A LINE L1 4347 5956 -1025 2 1318 1315 62 68 0 chrX 96097129 96097306 -70552990 + B2_Mm2 SINE B2 2 190 -5 2 1318 209 227 0 43 chrX 96097909 96097955 -70552341 + G-rich Low_complexity Low_complexity 3 46 0 2 1318 1279 61 0 22 chrX 96097956 96098140 -70552156 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 2 1318 585 0 0 0 chrX 96098142 96098207 -70552089 + (GGAGA)n Simple_repeat Simple_repeat 1 65 0 2 1318 375 205 0 49 chrX 96098320 96098402 -70551894 - ID4_ SINE ID -5 78 1 2 1318 227 320 110 0 chrX 96098698 96098798 -70551498 + PB1 SINE Alu 7 117 -10 2 1318 1495 119 98 16 chrX 96098888 96099143 -70551153 + Lx2 LINE L1 6721 6996 -1 2 1318 415 306 7 0 chrX 96099146 96099290 -70551006 + B1F SINE Alu 1 145 -4 2 1318 29 0 0 0 chrX 96099362 96099391 -70550905 + AT_rich Low_complexity Low_complexity 1 29 0 2 1318 316 305 9 14 chrX 96099887 96099992 -70550304 + B1F SINE Alu 39 147 -1 2 1318 245 286 0 0 chrX 96100105 96100161 -70550135 - MIR SINE MIR -64 144 89 2 1318 455 261 33 8 chrX 96100290 96100427 -70549869 - B1F1 SINE Alu -8 141 2 2 1318 746 169 0 0 chrX 96100503 96100627 -70549669 - B1_Mur2 SINE Alu -2 147 24 2 1318 282 328 47 95 chrX 96100506 96100654 -70549642 - B4 SINE B4 -69 223 83 2 1318 426 300 0 0 chrX 96100870 96100980 -70549316 - PB1D7 SINE Alu -6 114 5 2 1318 616 325 36 49 chrX 96101046 96101269 -70549027 - B4 SINE B4 -5 287 68 2 1318 231 212 23 70 chrX 96101301 96101356 -70548940 + (TTG)n Simple_repeat Simple_repeat 1 54 0 2 1318 207 0 0 0 chrX 96101356 96101379 -70548917 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2 1318 231 212 23 70 chrX 96101379 96101409 -70548887 + (TTG)n Simple_repeat Simple_repeat 3 30 0 2 1318 401 188 0 56 chrX 96101415 96101505 -70548791 - PB1D7 SINE Alu -21 99 15 2 1318 228 234 21 0 chrX 96101508 96101555 -70548741 + CT-rich Low_complexity Low_complexity 1 48 0 2 1318 351 0 0 0 chrX 96101560 96101599 -70548697 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1318 698 287 55 85 chrX 96101653 96101859 -70548437 + B4A SINE B4 3 217 -75 2 1318 378 0 0 0 chrX 96101859 96101901 -70548395 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 2 1318 698 287 55 85 chrX 96101901 96101912 -70548384 + B4A SINE B4 218 221 -71 2 1318 1042 144 32 32 chrX 96101912 96102099 -70548197 + B2_Mm2 SINE B2 1 187 -8 2 1318 698 287 55 85 chrX 96102099 96102173 -70548123 + B4A SINE B4 222 286 -6 2 1318 338 219 20 99 chrX 96102622 96102774 -70547522 - L1MB7 LINE L1 -8 6176 6037 2 1318 370 162 110 126 chrX 96102890 96103017 -70547279 + MT2B LTR ERVL 140 264 -337 2 1318 1007 23 0 0 chrX 96102921 96103049 -70547247 + B1_Mm SINE Alu 17 144 -3 2 1318 393 22 0 0 chrX 96103049 96103095 -70547201 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 2 1318 1677 243 17 122 chrX 96103229 96103768 -70546528 + RMER1B Other Other 21 502 -564 2 1318 4181 185 37 157 chrX 96103773 96104920 -70545376 + RMER1A Other Other 8 1016 -14 2 1318 912 19 0 0 chrX 96104920 96105026 -70545270 + (GAA)n Simple_repeat Simple_repeat 1 106 0 2 1318 743 180 0 101 chrX 96105032 96105211 -70545085 + MTD LTR MaLR 206 366 -53 2 1318 212 321 12 0 chrX 96105235 96105316 -70544980 + B1_Mus1 SINE Alu 36 117 -31 2 1318 405 219 0 0 chrX 96105248 96105330 -70544966 + ID_B1 SINE B4 129 210 -14 2 1318 543 85 0 0 chrX 96105392 96105474 -70544822 + (TG)n Simple_repeat Simple_repeat 1 82 0 2 1318 487 220 18 0 chrX 96105721 96105830 -70544466 + B1F SINE Alu 33 143 -6 2 1318 799 146 0 14 chrX 96105999 96106145 -70544151 - B1_Mur4 SINE Alu 0 150 7 2 1318 257 310 69 0 chrX 96106348 96106464 -70543832 + RMER15 LTR ERVL 452 575 0 2 1318 37 23 0 0 chrX 96106571 96106615 -70543681 + AT_rich Low_complexity Low_complexity 1 44 0 2 1318 1203 55 7 0 chrX 96106620 96106766 -70543530 + B1_Mm SINE Alu 1 147 0 2 1318 194 0 39 0 chrX 96106770 96106796 -70543500 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1318 334 265 0 0 chrX 96107138 96107206 -70543090 + ID4_ SINE ID 2 69 -14 2 1318 209 232 14 0 chrX 96107213 96107282 -70543014 + GA-rich Low_complexity Low_complexity 4 73 0 2 1318 384 245 82 44 chrX 96107584 96107742 -70542554 + L1M5 LINE L1 3805 3968 -2178 2 1318 31 26 0 0 chrX 96107825 96107863 -70542433 + AT_rich Low_complexity Low_complexity 1 38 0 2 1318 394 297 9 0 chrX 96107971 96108087 -70542209 - PB1D7 SINE Alu -2 118 2 2 1318 219 133 0 0 chrX 96108116 96108161 -70542135 + (A)n Simple_repeat Simple_repeat 1 45 0 2 1318 449 274 18 0 chrX 96108202 96108315 -70541981 + PB1D10 SINE Alu 1 115 -2 2 1318 729 238 0 67 chrX 96108714 96108953 -70541343 + RMER15 LTR ERVL 306 528 -47 2 1318 363 73 0 0 chrX 96108953 96109008 -70541288 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1318 477 129 0 0 chrX 96109008 96109101 -70541195 + (GA)n Simple_repeat Simple_repeat 1 93 0 2 1318 227 270 63 0 chrX 96109357 96109420 -70540876 + PB1D10 SINE Alu 1 67 -50 2 1318 255 288 0 91 chrX 96109423 96109511 -70540785 - RMER21A LTR ERV1 -112 835 756 2 1318 226 200 0 0 chrX 96109502 96109547 -70540749 - RMER21A LTR ERV1 -273 569 525 2 1318 243 0 0 0 chrX 96109955 96109982 -70540314 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2 1318 662 299 10 19 chrX 96109985 96110193 -70540103 - B3 SINE B2 -10 206 1 2 1318 358 300 89 34 chrX 96110567 96110802 -70539494 + RLTR6-int LTR ERV1 3019 3266 -4512 2 1318 423 0 0 0 chrX 96110929 96110976 -70539320 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1318 235 329 0 12 chrX 96112399 96112482 -70537814 + L1MC4 LINE L1 6936 7017 -1025 2 1318 299 384 57 32 chrX 96112578 96112627 -70537669 + RMER5 LTR ERV1 70 124 -410 2 1318 460 200 55 45 chrX 96112627 96112737 -70537559 - PB1D10 SINE Alu -5 112 2 2 1318 299 384 57 32 chrX 96112737 96113128 -70537168 + RMER5 LTR ERV1 125 520 -14 2 1318 225 260 109 10 chrX 96113184 96113285 -70537011 + L1MC4 LINE L1 7241 7351 -691 2 1318 683 184 79 22 chrX 96113349 96113488 -70536808 - B1_Mur1 SINE Alu -2 147 1 2 1318 518 271 8 0 chrX 96113532 96113665 -70536631 + B1F1 SINE Alu 16 149 0 2 1318 411 245 97 109 chrX 96113747 96113985 -70536311 - LTR48 LTR ERV1 0 787 337 2 1318 318 220 18 115 chrX 96114290 96114403 -70535893 - L1MCa LINE L1 -4506 2002 1901 2 1318 877 265 75 15 chrX 96114443 96114776 -70535520 - L1MA4 LINE L1 -388 5912 5560 2 1318 680 307 105 97 chrX 96115036 96115176 -70535120 - L1_Mur3 LINE L1 -317 5530 5388 2 1318 210 37 0 0 chrX 96115176 96115203 -70535093 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2 1318 934 299 98 72 chrX 96115203 96116015 -70534281 - L1_Mur3 LINE L1 -489 5391 4570 2 1318 734 204 68 0 chrX 96116016 96116148 -70534148 + B1_Mur3 SINE Alu 1 141 -8 2 1318 26 30 0 0 chrX 96116155 96116188 -70534108 + AT_rich Low_complexity Low_complexity 1 33 0 2 1318 587 235 0 0 chrX 96116214 96116333 -70533963 - B3 SINE B2 -95 121 3 2 1318 541 250 88 0 chrX 96116394 96116530 -70533766 - B1F SINE Alu -1 148 1 2 1318 260 239 43 36 chrX 96116533 96116672 -70533624 - L1M3 LINE L1 -855 5291 5152 2 1318 501 17 0 0 chrX 96116772 96116830 -70533466 + (TA)n Simple_repeat Simple_repeat 2 59 0 2 1318 366 233 19 64 chrX 96117312 96117469 -70532827 - L1M3 LINE L1 -1098 5048 4885 2 1318 299 308 13 0 chrX 96117710 96117788 -70532508 + ID4 SINE ID 2 80 -3 2 1318 999 229 57 0 chrX 96117808 96118000 -70532296 + B3 SINE B2 1 203 -13 2 1318 1225 105 76 0 chrX 96118031 96118203 -70532093 + B2_Mm2 SINE B2 2 186 -9 2 1318 448 69 0 7 chrX 96118805 96118869 -70531427 + B1_Mur4 SINE Alu 68 150 0 3 1318 867 132 0 15 chrX 96119102 96119233 -70531063 + B1_Mur3 SINE Alu 21 149 0 3 1318 26 0 0 0 chrX 96119437 96119463 -70530833 + AT_rich Low_complexity Low_complexity 1 26 0 3 1318 1713 187 19 13 chrX 96119471 96119585 -70530711 - L1_Mur2 LINE L1 -5792 920 809 3 1318 1225 94 45 91 chrX 96119585 96119626 -70530670 - B2_Mm1t SINE B2 -4 189 155 3 1318 1523 63 5 31 chrX 96119626 96119822 -70530474 + B2_Mm1t SINE B2 2 192 -1 3 1318 1225 94 45 91 chrX 96119822 96119978 -70530318 - B2_Mm1t SINE B2 -39 154 1 3 1318 1713 187 19 13 chrX 96119978 96120237 -70530059 - L1_Mur2 LINE L1 -5904 808 545 3 1318 3800 165 190 54 chrX 96120295 96120964 -70529332 - RMER19B LTR ERVK 0 902 151 3 1318 180 0 0 0 chrX 96120964 96120984 -70529312 + (TA)n Simple_repeat Simple_repeat 1 20 0 3 1318 3800 165 190 54 chrX 96120984 96121108 -70529188 - RMER19B LTR ERVK -752 150 1 3 1318 842 210 93 0 chrX 96121880 96122094 -70528202 - Lx7 LINE L1 -282 7414 7181 3 1318 552 15 0 0 chrX 96122095 96122160 -70528136 + (TTC)n Simple_repeat Simple_repeat 3 67 0 3 1318 593 108 0 0 chrX 96122162 96122245 -70528051 - B2_Mm2 SINE B2 -111 84 2 3 1318 994 254 32 7 chrX 96122245 96122522 -70527774 - Lx7 LINE L1 -508 7188 6905 3 1318 228 398 78 0 chrX 96123364 96123467 -70526829 - PB1D10 SINE Alu -6 111 1 3 1318 362 392 11 0 chrX 96123495 96123676 -70526620 - MIR SINE MIR -67 195 13 3 1318 1203 209 10 10 chrX 96123817 96124025 -70526271 + B3 SINE B2 2 209 -7 3 1318 317 304 0 0 chrX 96124232 96124311 -70525985 - ID4 SINE ID -3 80 2 3 1318 799 185 7 0 chrX 96124323 96124458 -70525838 - B1_Mur1 SINE Alu -5 144 9 3 1318 537 241 7 78 chrX 96124458 96124476 -70525820 - ID_B1 SINE B4 -5 219 78 3 1318 305 175 94 59 chrX 96124491 96124576 -70525720 - PB1D10 SINE Alu -8 109 22 3 1318 189 0 0 0 chrX 96124733 96124754 -70525542 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1318 595 220 387 71 chrX 96124754 96125201 -70525095 - RMER21B LTR ERV1 -278 669 1 3 1318 3942 258 97 68 chrX 96125268 96126605 -70523691 - Lx8 LINE L1 -2 7471 6097 3 1318 799 129 8 8 chrX 96126678 96126795 -70523501 - PB1D9 SINE Alu -1 119 3 3 1318 248 233 10 113 chrX 96127251 96127348 -70522948 - Lx8 LINE L1 -636 6837 6751 3 1318 702 233 52 11 chrX 96127951 96128125 -70522171 - Lx8 LINE L1 -730 6743 6563 3 1318 305 269 15 0 chrX 96128417 96128484 -70521812 + ID SINE ID 4 71 -153 3 1318 847 295 18 85 chrX 96128654 96128936 -70521360 + B4A SINE B4 30 292 0 3 1318 417 196 64 0 chrX 96129330 96129420 -70520876 + PB1D10 SINE Alu 18 113 -36 3 1318 348 304 125 0 chrX 96129420 96129442 -70520854 + ID_B1 SINE B4 99 224 0 3 1318 630 135 0 0 chrX 96129452 96129556 -70520740 + (GA)n Simple_repeat Simple_repeat 1 104 0 3 1318 22 0 0 0 chrX 96129795 96129817 -70520479 + AT_rich Low_complexity Low_complexity 1 22 0 3 1318 578 238 63 77 chrX 96129949 96130092 -70520204 - ID_B1 SINE B4 -8 216 80 3 1318 556 273 73 39 chrX 96130370 96130549 -70519747 + ID_B1 SINE B4 39 223 -1 3 1318 408 313 122 0 chrX 96131205 96131320 -70518976 - B1F2 SINE Alu -9 140 12 3 1318 372 161 0 0 chrX 96131716 96131797 -70518499 + T-rich Low_complexity Low_complexity 1 81 0 3 1318 210 356 0 0 chrX 96132284 96132402 -70517894 + (CTCGG)n Simple_repeat Simple_repeat 3 120 0 3 1318 357 280 11 49 chrX 96132453 96132637 -70517659 + (CTCGG)n Simple_repeat Simple_repeat 4 180 0 3 1318 347 320 0 6 chrX 96132673 96132849 -70517447 + (CTCGG)n Simple_repeat Simple_repeat 4 178 0 3 1318 334 331 0 22 chrX 96133024 96133271 -70517025 + (CTCGG)n Simple_repeat Simple_repeat 1 241 0 3 1318 309 267 13 13 chrX 96134406 96134482 -70515814 + MIRc SINE MIR 15 90 -178 3 1318 274 304 0 25 chrX 96134485 96134566 -70515730 - L2a LINE L2 -1 3425 3347 3 1318 278 268 0 27 chrX 96134580 96134653 -70515643 + ID4_ SINE ID 5 75 -8 3 1318 24 0 0 0 chrX 96136275 96136299 -70513997 + AT_rich Low_complexity Low_complexity 1 24 0 3 1318 547 252 32 0 chrX 96136312 96136435 -70513861 - B1F SINE Alu -17 132 6 3 1318 248 302 39 70 chrX 96136321 96136449 -70513847 - MT2B LTR ERVL -322 279 156 3 1318 198 336 137 46 chrX 96136599 96136752 -70513544 - MIR3 SINE MIR -36 172 6 3 1318 407 194 11 0 chrX 96137082 96137175 -70513121 + (TA)n Simple_repeat Simple_repeat 1 94 0 3 1318 442 245 90 9 chrX 96137270 96137381 -70512915 + PB1D7 SINE Alu 1 120 0 3 1318 339 206 40 14 chrX 96137562 96137636 -70512660 - ID4_ SINE ID -4 79 4 3 1318 488 245 48 19 chrX 96139170 96139274 -70511022 + PB1D10 SINE Alu 3 109 -8 3 1318 309 228 23 102 chrX 96139291 96139379 -70510917 + ID4_ SINE ID 3 83 0 3 1318 473 252 28 9 chrX 96139412 96139520 -70510776 - PB1D10 SINE Alu -6 111 2 3 1318 408 271 15 69 chrX 96139605 96139736 -70510560 + ID_B1 SINE B4 98 221 -3 3 1318 375 293 0 0 chrX 96142336 96142418 -70507878 + ID4 SINE ID 2 83 0 3 1318 414 0 0 0 chrX 96142881 96142927 -70507369 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1318 637 270 96 10 chrX 96143451 96143649 -70506647 - L1MB7 LINE L1 -14 6170 5956 3 1318 236 234 110 52 chrX 96143688 96143785 -70506511 - MIRm SINE MIR -92 176 78 3 1318 407 236 0 0 chrX 96145086 96145158 -70505138 - ID2 SINE ID -10 73 2 3 1318 317 258 185 13 chrX 96145158 96145261 -70505035 - PB1D10 SINE Alu -1 119 1 3 1318 269 333 29 29 chrX 96145261 96145304 -70504992 - ID SINE ID -146 78 36 3 1318 252 306 0 13 chrX 96145316 96145394 -70504902 - MIRb SINE MIR -100 108 37 3 1318 1184 75 0 13 chrX 96145541 96145690 -70504606 + B1_Mus1 SINE Alu 2 148 0 3 1318 264 145 15 39 chrX 96146156 96146216 -70504080 - ID4_ SINE ID -87 65 3 3 1318 328 309 134 0 chrX 96146747 96146844 -70503452 - PB1D10 SINE Alu -6 111 2 3 1318 3504 141 25 1 chrX 96146880 96147524 -70502772 + L1_Mur1 LINE L1 709 1368 -4518 3 1318 289 315 37 33 chrX 96147586 96147844 -70502452 - L1MD2 LINE L1 -4658 1982 1687 3 1318 276 270 16 0 chrX 96147993 96148056 -70502240 - ID4 SINE ID -19 64 1 3 1318 367 136 167 36 chrX 96148069 96148153 -70502143 - PB1D10 SINE Alu -5 115 21 3 1318 304 337 52 23 chrX 96148154 96148203 -70502093 - L1MD2 LINE L1 -4986 1654 1607 3 1318 276 30 0 0 chrX 96148203 96148236 -70502060 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 3 1318 304 337 52 23 chrX 96148236 96148359 -70501937 - L1MD2 LINE L1 -5034 1606 1477 3 1318 294 299 58 33 chrX 96148378 96148499 -70501797 + MER96B DNA hAT 188 311 -106 3 1318 348 261 134 46 chrX 96148501 96148754 -70501542 + L1M2 LINE L1 5548 5821 -470 3 1318 241 321 9 27 chrX 96148806 96148918 -70501378 + ID_B1 SINE B4 70 179 -45 3 1318 398 257 9 18 chrX 96148822 96148933 -70501363 + PB1D7 SINE Alu 6 115 -5 3 1318 1259 48 7 0 chrX 96149040 96149187 -70501109 - B1_Mus1 SINE Alu 0 148 1 3 1318 279 278 154 11 chrX 96149352 96149527 -70500769 - L1MD2 LINE L1 -5501 1046 847 3 1318 1996 80 69 0 chrX 96149558 96149833 -70500463 - Lx LINE L1 0 6654 6361 3 1318 418 325 96 96 chrX 96150173 96150506 -70499790 - L1MD2 LINE L1 -5884 663 340 3 1318 2142 40 12 0 chrX 96150506 96150755 -70499541 + L1Md_F3 LINE L1 6330 6581 -3 3 1318 418 325 96 96 chrX 96150755 96150965 -70499331 - L1MD2 LINE L1 -6208 339 120 3 1318 217 227 0 0 chrX 96151647 96151691 -70498605 + MIR SINE MIR 89 132 -76 3 1318 744 245 6 12 chrX 96151711 96151872 -70498424 + RSINE1 SINE B4 4 163 -2 3 1318 369 0 0 0 chrX 96151951 96151992 -70498304 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1318 446 159 595 7 chrX 96151994 96152131 -70498165 - ORR1B2 LTR MaLR -160 218 1 3 1318 5612 153 52 36 chrX 96152168 96153553 -70496743 + Lx3C LINE L1 5520 6997 0 3 1318 359 217 272 0 chrX 96153830 96153922 -70496374 - PB1D7 SINE Alu -3 117 1 3 1318 263 261 50 80 chrX 96154071 96154171 -70496125 + B1F SINE Alu 1 97 -52 3 1318 240 35 0 0 chrX 96154177 96154206 -70496090 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 3 1318 880 308 167 25 chrX 96154221 96154658 -70495638 + MLT1F1 LTR MaLR 22 520 -49 3 1318 910 239 48 22 chrX 96154769 96154981 -70495315 + B3 SINE B2 3 210 -6 3 1318 2471 303 110 33 chrX 96155059 96156107 -70494189 + MLT1F1-int LTR MaLR 9 1136 -353 3 1318 686 225 18 121 chrX 96156109 96156293 -70494003 - B3A SINE B2 -6 192 27 3 1318 540 0 0 0 chrX 96156304 96156364 -70493932 + (TCCC)n Simple_repeat Simple_repeat 1 60 0 3 1318 687 84 0 0 chrX 96156364 96156459 -70493837 + (TTTTC)n Simple_repeat Simple_repeat 3 97 0 3 1318 254 254 162 15 chrX 96156480 96156548 -70493748 - ID4 SINE ID -4 79 2 3 1318 404 255 128 0 chrX 96156548 96156650 -70493646 - PB1D7 SINE Alu -5 115 1 3 1318 405 0 0 0 chrX 96156770 96156815 -70493481 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1318 195 69 0 0 chrX 96156955 96156984 -70493312 + (TTTTTG)n Simple_repeat Simple_repeat 5 33 0 3 1318 1513 63 21 10 chrX 96156984 96157176 -70493120 - B2_Mm2 SINE B2 0 195 2 3 1318 256 224 0 0 chrX 96157348 96157397 -70492899 - B1F SINE Alu -4 145 97 3 1318 563 294 93 23 chrX 96157940 96158175 -70492121 + MLT1F1 LTR MaLR 305 558 -2 3 1318 1228 73 0 22 chrX 96158435 96158618 -70491678 + (TCCCC)n Simple_repeat Simple_repeat 2 180 0 3 1318 363 290 29 53 chrX 96159157 96159328 -70490968 + L1MB1 LINE L1 5866 6032 -136 3 1318 1737 138 199 27 chrX 96159328 96159664 -70490632 - ORR1B1 LTR MaLR 0 394 1 3 1318 4301 178 56 5 chrX 96159664 96160507 -70489789 - ORR1B1-int LTR MaLR 0 1509 624 3 1318 712 261 63 90 chrX 96160447 96160746 -70489550 - MT2B LTR ERVL -308 293 3 3 1318 913 220 32 0 chrX 96160814 96161000 -70489296 + B3 SINE B2 24 215 -1 3 1318 381 109 0 0 chrX 96161071 96161135 -70489161 + (CA)n Simple_repeat Simple_repeat 1 64 0 3 1318 709 201 72 12 chrX 96161137 96161303 -70488993 + L1MA10 LINE L1 6158 6333 -1 3 1318 191 250 95 27 chrX 96161303 96161377 -70488919 - L2a LINE L2 -207 3219 3141 3 1318 457 261 18 0 chrX 96161387 96161498 -70488798 - PB1D10 SINE Alu -1 116 4 3 1318 209 290 0 68 chrX 96161659 96161733 -70488563 + L2 LINE L2 191 259 -3160 3 1318 1178 73 0 0 chrX 96162234 96162371 -70487925 + B1_Mus1 SINE Alu 2 138 -10 3 1318 534 31 0 0 chrX 96162371 96162435 -70487861 + (TAAA)n Simple_repeat Simple_repeat 2 65 0 4 1318 231 260 52 0 chrX 96162955 96163032 -70487264 - RMER1B Other Other 0 1066 986 4 1318 453 243 120 31 chrX 96162974 96163165 -70487131 - Lx8 LINE L1 -2 7471 7264 4 1318 311 318 50 31 chrX 96163192 96163351 -70486945 + L2 LINE L2 2551 2712 -707 3 1318 3962 56 0 0 chrX 96163478 96163945 -70486351 + L1Md_F3 LINE L1 6117 6583 -1 4 1318 720 158 0 8 chrX 96163974 96164095 -70486201 + MTC LTR MaLR 1 120 -301 4 1318 1984 217 85 56 chrX 96164112 96164136 -70486160 - Lx7 LINE L1 -3 7693 7671 4 1318 824 230 0 0 chrX 96164136 96164275 -70486021 + B1_Mur4 SINE Alu 1 139 -11 4 1318 1984 217 85 56 chrX 96164275 96164874 -70485422 - Lx7 LINE L1 -26 7670 7052 4 1318 253 310 0 0 chrX 96165263 96165334 -70484962 + GA-rich Low_complexity Low_complexity 3 73 0 4 1318 320 294 114 34 chrX 96165474 96165562 -70484734 - PB1D10 SINE Alu -6 121 27 4 1318 2039 268 131 54 chrX 96165619 96166024 -70484272 - L1M4 LINE L1 -966 5180 4764 4 1318 336 257 27 0 chrX 96166024 96166098 -70484198 - ID4_ SINE ID -3 80 5 4 1318 2039 268 131 54 chrX 96166098 96166405 -70483891 - L1M4 LINE L1 -1383 4763 4418 4 1318 666 271 0 7 chrX 96166405 96166550 -70483746 - B1_Mur2 SINE Alu -5 144 1 4 1318 2039 268 131 54 chrX 96166550 96166762 -70483534 - L1M4 LINE L1 -1729 4417 4249 4 1318 541 264 9 0 chrX 96166762 96166872 -70483424 - PB1D10 SINE Alu -2 115 5 4 1318 2039 274 107 53 chrX 96166872 96167688 -70482608 - L1M4 LINE L1 -1898 4248 3299 4 1318 317 0 0 0 chrX 96167797 96167835 -70482461 - U2 snRNA snRNA -150 38 1 4 1318 786 278 72 27 chrX 96167843 96168216 -70482080 - L1M4 LINE L1 -3325 2821 2432 4 1318 831 181 85 81 chrX 96168254 96168501 -70481795 - Lx7 LINE L1 0 7696 7449 4 1318 434 233 15 29 chrX 96168553 96168690 -70481606 + Lx5 LINE L1 6911 7045 -5 4 1318 6310 181 22 32 chrX 96168695 96169903 -70480393 - Lx7 LINE L1 -311 7385 6190 4 1318 270 0 0 0 chrX 96169903 96169933 -70480363 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1318 24 0 0 0 chrX 96169959 96169983 -70480313 + AT_rich Low_complexity Low_complexity 1 24 0 4 1318 4905 162 10 0 chrX 96169992 96170806 -70479490 - Lx LINE L1 -6 6648 5827 4 1318 9796 12 0 0 chrX 96170810 96172613 -70477683 - L1Md_T LINE L1 0 6582 4780 4 1318 3956 121 10 5 chrX 96172581 96173162 -70477134 - L1Md_T LINE L1 -7 5876 5293 4 1318 8209 109 110 7 chrX 96173162 96175494 -70474802 - L1_Mus1 LINE L1 0 6567 3955 4 1318 331 265 0 0 chrX 96175538 96175636 -70474660 - Lx7 LINE L1 -28 7668 7571 4 1318 351 0 0 0 chrX 96175637 96175676 -70474620 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1318 943 227 62 4 chrX 96175681 96175938 -70474358 - Lx7 LINE L1 -1533 6163 5892 4 1318 617 216 66 0 chrX 96175948 96176115 -70474181 - L1M4 LINE L1 -3765 2381 2204 4 1318 533 241 0 0 chrX 96176356 96176468 -70473828 - PB1D10 SINE Alu -5 112 1 4 1318 326 250 20 40 chrX 96176718 96176818 -70473478 - MER97c DNA MER1_type? -735 355 258 4 1318 342 0 0 0 chrX 96177435 96177473 -70472823 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 4 1318 712 289 29 10 chrX 96177473 96177679 -70472617 - ID_B1 SINE B4 -13 211 2 4 1318 399 41 0 0 chrX 96177809 96177858 -70472438 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1318 29 0 0 0 chrX 96177973 96178002 -70472294 + AT_rich Low_complexity Low_complexity 1 29 0 4 1318 529 230 8 31 chrX 96178238 96178368 -70471928 - RMER15 LTR ERVL -133 442 316 4 1318 272 229 136 24 chrX 96178532 96178657 -70471639 - MER95 LTR ERV 0 431 293 4 1318 945 0 0 0 chrX 96178700 96178805 -70471491 + (TCTCCC)n Simple_repeat Simple_repeat 5 109 0 4 1318 303 308 89 35 chrX 96178846 96179048 -70471248 + L1M5 LINE L1 5588 5800 -440 4 1318 948 242 129 24 chrX 96179122 96179502 -70470794 + MER95 LTR ERV 12 431 0 4 1318 321 135 0 0 chrX 96180193 96180245 -70470051 + (CATG)n Simple_repeat Simple_repeat 3 54 0 4 1318 1190 148 113 5 chrX 96180721 96180925 -70469371 - URR1A DNA MER1_type 0 226 1 4 1318 180 339 53 35 chrX 96181378 96181491 -70468805 - L2b LINE L2 -225 3150 3036 4 1318 305 312 61 56 chrX 96181541 96181721 -70468575 - MLT1L LTR MaLR -3 607 427 4 1318 256 256 0 85 chrX 96181705 96181799 -70468497 - MTE2a LTR MaLR -4 375 290 4 1318 233 260 0 0 chrX 96181855 96181905 -70468391 + G-rich Low_complexity Low_complexity 5 54 0 4 1318 269 255 120 20 chrX 96181907 96182007 -70468289 + B1_Mur1 SINE Alu 40 149 0 4 1318 1000 118 43 53 chrX 96182029 96182217 -70468079 + B2_Mm2 SINE B2 2 187 -8 4 1318 5503 48 1 0 chrX 96182225 96182886 -70467410 - L1Md_F2 LINE L1 -73 5810 5149 4 1318 5700 97 5 3 chrX 96182886 96183660 -70466636 + L1Md_F2 LINE L1 5795 6570 -12 4 1318 233 322 0 11 chrX 96183800 96183894 -70466402 - MLT1L LTR MaLR -278 130 38 4 1318 372 223 185 20 chrX 96184054 96184205 -70466091 - B4 SINE B4 -115 177 2 4 1318 727 128 37 8 chrX 96184863 96184997 -70465299 - URR1B DNA MER1_type -45 180 43 4 1318 519 311 18 6 chrX 96185953 96186118 -70464178 + B3A SINE B2 2 168 -30 4 1318 216 0 0 0 chrX 96186356 96186380 -70463916 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1318 1017 126 21 32 chrX 96186387 96186575 -70463721 - B2_Mm2 SINE B2 -9 186 1 4 1318 368 301 22 22 chrX 96186629 96186768 -70463528 + L2a LINE L2 3245 3383 -43 4 1318 290 300 0 0 chrX 96186895 96186965 -70463331 + PB1D10 SINE Alu 33 102 -15 4 1318 231 247 39 0 chrX 96187355 96187432 -70462864 - L1MA7 LINE L1 -10 6281 6202 4 1318 3092 84 58 0 chrX 96187427 96187857 -70462439 - L1VL2 LINE L1 -5549 786 332 4 1318 262 252 9 126 chrX 96187928 96188029 -70462267 + L1M2 LINE L1 5169 5267 -876 4 1318 482 27 0 64 chrX 96188029 96188107 -70462189 + L1_Mus3 LINE L1 6566 6638 0 4 1318 262 252 9 126 chrX 96188107 96188227 -70462069 + L1M2 LINE L1 5268 5364 -779 4 1318 278 294 0 11 chrX 96188491 96188584 -70461712 + (TTG)n Simple_repeat Simple_repeat 2 93 0 4 1318 1072 253 67 27 chrX 96189627 96189956 -70460340 - MTE2b LTR MaLR -37 342 1 4 1318 1896 209 11 23 chrX 96189956 96190394 -70459902 - MTE2b-int LTR MaLR -16 1564 1132 4 1318 796 203 0 7 chrX 96190446 96190569 -70459727 - B1_Mur2 SINE Alu -1 148 26 4 1318 3675 50 0 0 chrX 96190569 96191013 -70459283 + L1Md_F2 LINE L1 6127 6570 -12 4 1318 796 203 0 7 chrX 96191013 96191038 -70459258 - B1_Mur2 SINE Alu -124 25 1 4 1318 234 122 24 0 chrX 96191110 96191151 -70459145 - MTE2b-int LTR MaLR -955 625 584 4 1318 962 62 8 0 chrX 96191151 96191281 -70459015 + (TTCTC)n Simple_repeat Simple_repeat 4 134 0 4 1318 436 340 12 50 chrX 96191310 96191471 -70458825 - RSINE1 SINE B4 0 165 11 4 1318 529 316 20 7 chrX 96191524 96191677 -70458619 + RSINE1 SINE B4 3 157 -8 4 1318 342 0 0 0 chrX 96191677 96191715 -70458581 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1318 32 0 0 0 chrX 96191726 96191758 -70458538 + AT_rich Low_complexity Low_complexity 1 32 0 4 1318 802 268 26 13 chrX 96191781 96192012 -70458284 - MTE2b-int LTR MaLR -1346 234 1 4 1318 1101 271 45 39 chrX 96192090 96192449 -70457847 - MTE2b LTR MaLR -18 341 1 4 1318 354 295 52 48 chrX 96193215 96193425 -70456871 + L1M5 LINE L1 5591 5801 -363 4 1318 310 304 14 35 chrX 96193429 96193572 -70456724 + MIRb SINE MIR 114 253 -15 4 1318 30 77 0 0 chrX 96193846 96193911 -70456385 + AT_rich Low_complexity Low_complexity 1 65 0 4 1318 920 261 78 109 chrX 96193918 96194395 -70455901 - Lx9 LINE L1 -19 7625 7164 4 1318 248 261 15 0 chrX 96194456 96194521 -70455775 + RMER15 LTR ERVL 423 488 -87 4 1318 1045 73 0 0 chrX 96195310 96195446 -70454850 + B1_Mus2 SINE Alu 1 136 -11 4 1318 306 252 70 16 chrX 96195520 96195649 -70454647 + Charlie1b DNA MER1_type 363 498 -25 4 1318 385 324 125 14 chrX 96196542 96196758 -70453538 - MIR SINE MIR -10 252 13 4 1318 223 286 0 16 chrX 96198529 96198593 -70451703 + CT-rich Low_complexity Low_complexity 2 64 0 4 1318 234 320 13 0 chrX 96199077 96199152 -70451144 + MIRb SINE MIR 101 176 -92 4 1318 22 0 0 0 chrX 96199265 96199287 -70451009 + AT_rich Low_complexity Low_complexity 1 22 0 4 1318 450 0 0 0 chrX 96200898 96200948 -70449348 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1318 226 316 22 22 chrX 96200972 96201033 -70449263 + (CATATA)n Simple_repeat Simple_repeat 4 67 0 4 1318 1349 161 4 18 chrX 96201033 96201261 -70449035 + URR1B DNA MER1_type 1 225 0 4 1318 226 316 22 22 chrX 96201261 96201338 -70448958 + (CATATA)n Simple_repeat Simple_repeat 2 76 0 4 1318 387 0 0 0 chrX 96201382 96201425 -70448871 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1318 3716 47 0 4 chrX 96202694 96203144 -70447152 + L1Md_F2 LINE L1 6134 6581 -1 4 1318 182 344 44 0 chrX 96203150 96203240 -70447056 - MIR3 SINE MIR -41 167 74 4 1318 413 248 33 0 chrX 96203696 96203805 -70446491 - PB1D7 SINE Alu -7 113 1 4 1318 335 282 0 0 chrX 96205169 96205247 -70445049 - ID4_ SINE ID -3 80 3 4 1318 237 65 0 0 chrX 96205807 96205838 -70444458 + (CCA)n Simple_repeat Simple_repeat 1 31 0 4 1319 584 300 93 20 chrX 96207031 96207235 -70443061 + ID_B1 SINE B4 1 219 -5 4 1319 429 54 0 0 chrX 96207739 96207795 -70442501 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 1319 1088 129 0 0 chrX 96208532 96208702 -70441594 - URR1A DNA MER1_type 0 226 57 4 1319 312 148 164 0 chrX 96208754 96208815 -70441481 + ID4 SINE ID 2 72 -11 4 1319 508 314 0 0 chrX 96208858 96208982 -70441314 + B1F SINE Alu 8 131 -18 4 1319 446 261 9 0 chrX 96209616 96209731 -70440565 - PB1D10 SINE Alu -1 116 1 4 1319 347 315 107 8 chrX 96210069 96210200 -70440096 - B1F1 SINE Alu -1 148 5 4 1319 533 76 13 0 chrX 96210859 96210938 -70439358 + (TTCC)n Simple_repeat Simple_repeat 4 83 0 4 1319 188 369 152 26 chrX 96211179 96211488 -70438808 + L2a LINE L2 3060 3407 -19 4 1319 733 273 0 12 chrX 96212032 96212195 -70438101 - RSINE1 SINE B4 -3 162 2 4 1319 307 287 175 7 chrX 96213701 96213838 -70436458 + ID_B1 SINE B4 1 160 -64 4 1319 242 264 0 53 chrX 96214291 96214367 -70435929 + U6 snRNA snRNA 11 82 -25 4 1319 356 248 9 54 chrX 96214384 96214495 -70435801 + PB1D10 SINE Alu 12 117 0 4 1319 186 71 0 0 chrX 96215013 96215041 -70435255 + (CAA)n Simple_repeat Simple_repeat 1 28 0 4 1319 199 376 20 0 chrX 96215441 96215542 -70434754 + MIR SINE MIR 41 143 -65 4 1319 227 327 98 12 chrX 96216343 96216507 -70433789 + MIR3 SINE MIR 27 204 -4 4 1319 1072 107 12 8 chrX 96217215 96217469 -70432827 + (TCC)n Simple_repeat Simple_repeat 1 255 0 5 1319 256 355 17 78 chrX 96218040 96218156 -70432140 - PB1D7 SINE Alu -9 111 3 5 1319 450 0 0 0 chrX 96219265 96219315 -70430981 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1319 441 0 0 0 chrX 96219315 96219363 -70430933 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1319 293 68 23 0 chrX 96220217 96220261 -70430035 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 5 1319 374 310 35 17 chrX 96220377 96220492 -70429804 - B1F SINE Alu -31 118 2 5 1319 240 296 23 0 chrX 96220976 96221064 -70429232 + MIR3 SINE MIR 65 154 -54 5 1319 378 0 0 0 chrX 96221887 96221929 -70428367 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1319 448 347 88 0 chrX 96221985 96222132 -70428164 + RSINE1 SINE B4 6 165 0 5 1319 362 74 19 0 chrX 96222146 96222200 -70428096 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 1319 258 313 0 0 chrX 96222329 96222396 -70427900 + ID4_ SINE ID 3 69 -14 5 1319 333 298 190 16 chrX 96222449 96222633 -70427663 + MIRc SINE MIR 26 241 -27 5 1319 192 286 26 13 chrX 96224045 96224123 -70426173 + MIR SINE MIR 174 252 -10 5 1319 554 230 60 60 chrX 96224127 96224261 -70426035 + RSINE1 SINE B4 3 136 -29 5 1319 239 79 26 0 chrX 96224274 96224312 -70425984 + (TAAG)n Simple_repeat Simple_repeat 1 39 0 5 1319 465 291 0 0 chrX 96224408 96224518 -70425778 + PB1D10 SINE Alu 1 110 -7 5 1319 1642 32 0 0 chrX 96224525 96224711 -70425585 + B2_Mm1a SINE B2 2 187 -6 5 1319 226 163 23 0 chrX 96225017 96225060 -70425236 - B3A SINE B2 -154 44 1 5 1319 672 248 0 7 chrX 96225068 96225206 -70425090 - B1_Mur1 SINE Alu -9 140 4 5 1319 232 96 0 55 chrX 96226147 96226202 -70424094 + G-rich Low_complexity Low_complexity 2 53 0 5 1319 960 194 55 36 chrX 96227225 96227444 -70422852 - URR1A DNA MER1_type 0 226 4 5 1319 324 281 137 26 chrX 96227692 96227809 -70422487 - MIRc SINE MIR -118 150 21 5 1319 262 328 37 57 chrX 96228260 96228406 -70421890 - L2b LINE L2 -2 3424 3260 5 1319 818 196 23 79 chrX 96228468 96228684 -70421612 + B3 SINE B2 1 204 -12 5 1319 278 212 14 43 chrX 96228767 96228836 -70421460 + MIRc SINE MIR 97 163 -105 5 1319 775 181 65 0 chrX 96228840 96228978 -70421318 + B1_Mus1 SINE Alu 2 148 0 5 1319 624 38 0 0 chrX 96229240 96229319 -70420977 + (TG)n Simple_repeat Simple_repeat 1 79 0 5 1319 211 224 0 39 chrX 96229621 96229672 -70420624 + MIR SINE MIR 84 132 -130 5 1319 538 242 60 0 chrX 96229678 96229813 -70420483 + B1F SINE Alu 1 142 -7 5 1319 322 336 16 16 chrX 96230063 96230184 -70420112 + Charlie16a DNA MER1_type 148 268 -74 5 1319 604 239 0 0 chrX 96230502 96230619 -70419677 + PB1D7 SINE Alu 2 118 -2 5 1319 390 21 0 0 chrX 96231255 96231302 -70418994 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1319 261 0 0 0 chrX 96231651 96231680 -70418616 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 1319 378 0 0 0 chrX 96231680 96231721 -70418575 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1319 206 316 153 31 chrX 96231803 96231901 -70418395 - MIRb SINE MIR -107 161 52 5 1319 241 296 93 62 chrX 96232090 96232252 -70418044 + RLTR13D4 LTR ERVK 43 209 -824 5 1319 369 0 0 0 chrX 96233964 96234005 -70416291 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1319 856 309 65 25 chrX 96235935 96236211 -70414085 + B4 SINE B4 1 287 -5 5 1319 198 0 0 0 chrX 96236245 96236267 -70414029 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 1319 214 242 146 117 chrX 96236324 96236427 -70413869 + PB1D10 SINE Alu 9 114 -3 5 1319 24 0 0 0 chrX 96241216 96241240 -70409056 + AT_rich Low_complexity Low_complexity 1 24 0 5 1319 415 284 60 35 chrX 96241289 96241490 -70408806 - L1MC5 LINE L1 -153 7808 7603 5 1319 345 309 36 14 chrX 96242637 96242775 -70407521 + B1F1 SINE Alu 1 141 -8 5 1319 543 155 0 0 chrX 96242776 96242879 -70407417 + GA-rich Low_complexity Low_complexity 1 103 0 5 1319 244 237 0 95 chrX 96243209 96243293 -70407003 + MIR3 SINE MIR 111 186 -22 5 1319 328 287 124 40 chrX 96243875 96244100 -70406196 - L3 LINE CR1 -247 4242 3999 5 1319 554 266 24 142 chrX 96245031 96245285 -70405011 + ID_B1 SINE B4 1 224 0 5 1319 334 363 37 48 chrX 96245751 96245939 -70404357 - MIR SINE MIR -40 222 37 5 1319 193 246 82 66 chrX 96246651 96246712 -70403584 + L2b LINE L2 3287 3348 -27 5 1319 336 187 72 64 chrX 96247160 96247260 -70403036 - MIRb SINE MIR -69 199 89 5 1319 195 217 32 48 chrX 96248795 96248858 -70401438 - MIRb SINE MIR -127 141 80 5 1319 303 214 76 87 chrX 96249591 96249683 -70400613 - MER20 DNA MER1_type -127 92 2 5 1319 468 0 0 0 chrX 96251151 96251203 -70399093 + (TC)n Simple_repeat Simple_repeat 2 53 0 5 1319 369 0 0 0 chrX 96251203 96251243 -70399053 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1319 369 253 30 40 chrX 96251340 96251439 -70398857 - MER5B DNA MER1_type -72 106 9 5 1319 207 0 0 0 chrX 96251560 96251583 -70398713 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1319 387 0 0 0 chrX 96251764 96251807 -70398489 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 1319 441 0 0 0 chrX 96251807 96251855 -70398441 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1319 244 263 37 73 chrX 96251988 96252070 -70398226 + ID4_ SINE ID 3 81 -2 5 1319 253 186 14 14 chrX 96252075 96252146 -70398150 + GA-rich Low_complexity Low_complexity 3 73 0 5 1319 1659 219 92 17 chrX 96252207 96252620 -70397676 - Lx6 LINE L1 0 7460 7017 5 1319 207 304 18 0 chrX 96252638 96252694 -70397602 - MIR SINE MIR -62 146 90 5 1319 238 337 23 11 chrX 96253916 96254003 -70396293 - MIRb SINE MIR -140 128 41 5 1319 273 357 29 58 chrX 96254048 96254185 -70396111 + MIRc SINE MIR 4 136 -132 5 1319 374 240 66 3 chrX 96255484 96255577 -70394719 - PB1D10 SINE Alu -21 99 1 5 1319 234 339 23 30 chrX 96256562 96256693 -70393603 + L2b LINE L2 2140 2269 -1150 5 1319 182 398 51 0 chrX 96256953 96257071 -70393225 + L2b LINE L2 2643 2766 -653 5 1319 236 320 110 7 chrX 96257154 96257310 -70392986 + L2b LINE L2 2949 3118 -257 5 1319 204 40 0 0 chrX 96257310 96257335 -70392961 + (TCTCTG)n Simple_repeat Simple_repeat 3 27 0 5 1319 269 298 97 59 chrX 96257335 96257606 -70392690 + L2b LINE L2 3101 3384 -42 5 1319 255 254 14 27 chrX 96257983 96258056 -70392240 - ORR1E LTR MaLR -15 364 293 5 1319 294 330 98 0 chrX 96258176 96258288 -70392008 - ORR1E LTR MaLR -182 177 55 5 1319 1019 121 18 0 chrX 96258339 96258504 -70391792 - URR1A DNA MER1_type -1 225 58 5 1319 194 355 48 28 chrX 96259072 96259217 -70391079 + L2 LINE L2 2697 2844 -575 5 1319 216 203 63 63 chrX 96260204 96260283 -70390013 + MIR3 SINE MIR 101 179 -29 5 1319 248 318 82 37 chrX 96260432 96260566 -70389730 + MIR3 SINE MIR 63 202 -6 5 1319 198 233 97 32 chrX 96260629 96260691 -70389605 + MIRc SINE MIR 90 155 -113 5 1319 291 54 0 0 chrX 96261839 96261876 -70388420 + (GGA)n Simple_repeat Simple_repeat 3 39 0 5 1319 270 311 142 15 chrX 96262459 96262593 -70387703 + MIR3 SINE MIR 37 187 -21 5 1319 25 0 0 0 chrX 96262827 96262852 -70387444 + AT_rich Low_complexity Low_complexity 1 25 0 5 1319 958 145 165 35 chrX 96265729 96265929 -70384367 + URR1A DNA MER1_type 1 226 0 5 1319 1691 175 183 79 chrX 96265929 96266397 -70383899 - MT2A LTR ERVL -16 517 1 5 1319 240 35 0 0 chrX 96266570 96266599 -70383697 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 1319 1129 130 5 68 chrX 96269372 96269533 -70380763 + B2_Mm2 SINE B2 3 161 -34 5 1319 186 43 0 0 chrX 96269533 96269556 -70380740 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 5 1319 1129 130 5 68 chrX 96269556 96269600 -70380696 + B2_Mm2 SINE B2 162 195 0 5 1319 276 200 0 0 chrX 96269849 96269909 -70380387 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 1319 555 56 0 0 chrX 96270982 96271053 -70379243 + (GA)n Simple_repeat Simple_repeat 2 72 0 5 1319 231 36 0 0 chrX 96271712 96271740 -70378556 + (CAAAG)n Simple_repeat Simple_repeat 2 29 0 5 1319 218 368 94 36 chrX 96274307 96274499 -70375797 - L2a LINE L2 -6 3420 3218 5 1319 251 161 18 0 chrX 96274570 96274626 -70375670 + (TCCA)n Simple_repeat Simple_repeat 1 57 0 5 1319 2085 183 68 10 chrX 96274708 96275106 -70375190 + MTC LTR MaLR 1 421 0 5 1319 375 220 0 0 chrX 96275107 96275198 -70375098 + (TCCA)n Simple_repeat Simple_repeat 4 94 0 5 1319 325 324 0 9 chrX 96275213 96275319 -70374977 + (CCCA)n Simple_repeat Simple_repeat 2 106 0 5 1319 292 314 153 79 chrX 96276011 96276201 -70374095 - ID_B1 SINE B4 -3 221 18 5 1319 495 231 116 16 chrX 96277851 96278040 -70372256 - L1MB5 LINE L1 -134 6040 5833 5 1319 399 171 0 0 chrX 96278134 96278239 -70372057 + CT-rich Low_complexity Low_complexity 2 106 0 5 1319 783 128 0 0 chrX 96278397 96278561 -70371735 + (TC)n Simple_repeat Simple_repeat 1 164 0 5 1319 277 250 58 0 chrX 96278616 96278720 -70371576 - L1MB5 LINE L1 -1138 5002 4893 5 1319 548 282 66 20 chrX 96279313 96279465 -70370831 + RSINE1 SINE B4 7 165 0 5 1319 297 215 38 15 chrX 96279523 96279655 -70370641 + (TA)n Simple_repeat Simple_repeat 1 135 0 5 1319 212 100 25 0 chrX 96279661 96279701 -70370595 + (TATATG)n Simple_repeat Simple_repeat 5 45 0 5 1319 519 17 0 0 chrX 96279880 96279940 -70370356 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 1319 312 48 0 0 chrX 96280057 96280099 -70370197 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1319 459 0 0 0 chrX 96280099 96280149 -70370147 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 1319 311 271 10 10 chrX 96280185 96280282 -70370014 + L1MA5 LINE L1 5840 5936 -364 5 1319 282 194 0 0 chrX 96280703 96280765 -70369531 + CT-rich Low_complexity Low_complexity 4 65 0 5 1319 357 282 0 12 chrX 96280768 96280854 -70369442 - PB1D10 SINE Alu -2 115 31 5 1319 221 287 248 0 chrX 96280868 96280969 -70369327 - MER5B DNA MER1_type -52 126 1 6 1319 278 304 106 41 chrX 96281086 96281300 -70368996 - MIR SINE MIR -43 225 9 6 1319 390 217 0 24 chrX 96281474 96281597 -70368699 + CT-rich Low_complexity Low_complexity 1 120 0 6 1319 306 204 45 46 chrX 96281854 96281982 -70368314 + L2a LINE L2 3200 3340 -86 6 1319 330 340 20 20 chrX 96282056 96282203 -70368093 + MIR SINE MIR 13 159 -103 6 1319 364 281 176 9 chrX 96282783 96283006 -70367290 + MLT2B4 LTR ERVL 47 307 -249 6 1319 630 193 0 35 chrX 96283570 96283683 -70366613 - Lx8 LINE L1 -1054 6419 6311 6 1319 680 92 8 0 chrX 96283944 96284063 -70366233 + (TC)n Simple_repeat Simple_repeat 1 120 0 6 1319 3612 31 2 7 chrX 96284786 96285211 -70365085 - L1Md_F2 LINE L1 -2 6580 6158 6 1319 396 0 0 0 chrX 96285368 96285412 -70364884 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 1319 442 103 26 0 chrX 96286198 96286276 -70364020 + (TG)n Simple_repeat Simple_repeat 1 80 0 6 1319 422 318 149 30 chrX 96287990 96288592 -70361704 - L2a LINE L2 -4 3422 2720 6 1319 909 28 0 0 chrX 96288625 96288733 -70361563 + (TC)n Simple_repeat Simple_repeat 2 109 0 6 1319 252 0 0 0 chrX 96288733 96288760 -70361536 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1319 255 218 36 0 chrX 96288792 96288847 -70361449 - L2a LINE L2 -851 2568 2512 6 1319 2970 47 44 3 chrX 96289242 96289608 -70360688 + L1Md_F2 LINE L1 6183 6563 -19 6 1319 216 67 0 0 chrX 96290130 96290160 -70360136 + (CAAAT)n Simple_repeat Simple_repeat 2 31 0 6 1319 3612 211 40 141 chrX 96290293 96291682 -70358614 + RMER1A Other Other 1 895 -135 6 1319 213 39 0 0 chrX 96291682 96291708 -70358588 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 1319 3612 197 45 167 chrX 96291708 96291827 -70358469 + RMER1A Other Other 896 1030 0 6 1319 1813 126 91 34 chrX 96292152 96292482 -70357814 - ORR1B1 LTR MaLR -54 340 1 6 1319 2591 198 76 24 chrX 96292486 96293049 -70357247 + Lx6 LINE L1 6665 7540 -156 6 1319 419 52 17 0 chrX 96293049 96293107 -70357189 + (TTTTA)n Simple_repeat Simple_repeat 2 60 0 6 1319 1238 179 106 43 chrX 96293107 96293270 -70357026 + Lx6 LINE L1 7541 7695 -1 6 1319 21 0 0 0 chrX 96293273 96293294 -70357002 + AT_rich Low_complexity Low_complexity 1 21 0 6 1319 1105 273 113 20 chrX 96293392 96293736 -70356560 - MLT1A1 LTR MaLR -12 396 21 6 1319 705 196 21 23 chrX 96294412 96294598 -70355698 - B3 SINE B2 -10 185 1 6 1319 600 344 35 32 chrX 96294720 96295002 -70355294 - B4A SINE B4 -8 284 2 6 1319 1466 250 91 37 chrX 96295008 96295627 -70354669 - L1M4c LINE L1 -1571 4805 4154 6 1319 1522 207 32 37 chrX 96295636 96296042 -70354254 - Lx9 LINE L1 -2 7642 7239 6 1319 543 16 0 0 chrX 96296072 96296136 -70354160 + (TG)n Simple_repeat Simple_repeat 2 65 0 6 1319 344 229 14 0 chrX 96296138 96296208 -70354088 - ID4 SINE ID -11 72 2 6 1319 540 0 0 0 chrX 96296270 96296330 -70353966 + (GGGA)n Simple_repeat Simple_repeat 1 60 0 6 1319 260 261 14 0 chrX 96296332 96296401 -70353895 + GA-rich Low_complexity Low_complexity 1 70 0 6 1319 290 208 72 29 chrX 96296411 96296541 -70353755 - L1M4c LINE L1 -3143 3233 3107 6 1319 476 263 13 99 chrX 96296552 96296704 -70353592 + RSINE1 SINE B4 12 150 -15 6 1319 1434 286 74 43 chrX 96296761 96297557 -70352739 - L1M4c LINE L1 -3276 3100 2279 6 1319 558 315 34 64 chrX 96297750 96297921 -70352375 - L1M4c LINE L1 -4594 1884 1606 6 1319 1191 99 0 0 chrX 96297921 96298093 -70352203 + (TTTCC)n Simple_repeat Simple_repeat 2 173 0 6 1319 558 310 37 68 chrX 96298093 96298269 -70352027 - L1M4c LINE L1 -4779 1605 1445 6 1319 244 289 57 8 chrX 96298269 96298391 -70351905 + Lx8 LINE L1 7340 7467 -6 6 1319 451 284 75 28 chrX 96298461 96298913 -70351383 - L1M3a LINE L1 -4596 2193 1693 6 1319 241 378 14 0 chrX 96298918 96298992 -70351304 - ID4 SINE ID -1 82 8 6 1319 289 288 109 52 chrX 96299513 96299708 -70350588 + MIRb SINE MIR 34 232 -30 6 1319 1029 53 105 0 chrX 96300089 96300222 -70350074 + B1_Mm SINE Alu 1 147 0 6 1319 364 270 0 0 chrX 96300798 96300872 -70349424 + 5S rRNA rRNA 17 90 -31 6 1319 264 281 98 52 chrX 96301077 96301250 -70349046 + ORSL DNA Tip100 71 251 -24 6 1319 212 338 34 37 chrX 96302234 96302457 -70347839 - MIRb SINE MIR -20 248 28 6 1319 1791 146 51 19 chrX 96302563 96302877 -70347419 - ORR1A4 LTR MaLR -5 324 1 6 1319 1668 26 5 0 chrX 96302928 96303120 -70347176 + B2_Mm1a SINE B2 1 193 0 6 1319 7523 70 12 2 chrX 96303128 96304109 -70346187 + L1_Mus3 LINE L1 5647 6637 -1 6 1319 414 269 128 0 chrX 96304361 96304510 -70345786 + RMER15 LTR ERVL 405 572 -3 6 1319 325 324 0 9 chrX 96305379 96305485 -70344811 + (TGGG)n Simple_repeat Simple_repeat 2 106 0 6 1319 447 152 0 0 chrX 96305500 96305579 -70344717 + (TGGA)n Simple_repeat Simple_repeat 4 82 0 6 1319 1939 191 70 20 chrX 96305592 96305993 -70344303 - MTC LTR MaLR 0 421 1 6 1319 251 161 18 0 chrX 96306075 96306131 -70344165 + (TGGA)n Simple_repeat Simple_repeat 1 57 0 6 1319 206 322 120 62 chrX 96306202 96306394 -70343902 + L2a LINE L2 3218 3420 -6 6 1319 553 290 15 27 chrX 96309585 96309771 -70340525 - MIR SINE MIR -23 245 62 6 1319 181 327 65 37 chrX 96309989 96310097 -70340199 + MIRc SINE MIR 8 118 -150 6 1319 261 0 0 0 chrX 96310409 96310438 -70339858 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 6 1319 288 0 0 0 chrX 96310445 96310477 -70339819 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1319 217 230 16 47 chrX 96310483 96310611 -70339685 + CT-rich Low_complexity Low_complexity 3 126 0 6 1319 697 257 0 0 chrX 96310618 96310762 -70339534 - B1F SINE Alu -5 144 1 6 1319 201 293 26 26 chrX 96311300 96311377 -70338919 + (CATG)n Simple_repeat Simple_repeat 1 77 0 6 1319 23 33 0 0 chrX 96311461 96311491 -70338805 + AT_rich Low_complexity Low_complexity 1 30 0 6 1319 208 194 65 0 chrX 96311833 96311895 -70338401 + (TA)n Simple_repeat Simple_repeat 1 66 0 6 1319 318 223 0 112 chrX 96312471 96312587 -70337709 - L1MB8 LINE L1 -5 6173 6071 6 1319 1252 224 136 13 chrX 96312592 96312908 -70337388 - MTD LTR MaLR -2 417 63 6 1319 814 221 46 6 chrX 96312905 96313078 -70337218 - ORR1D1 LTR MaLR -24 350 171 6 1319 552 53 0 0 chrX 96313079 96313155 -70337141 + (GA)n Simple_repeat Simple_repeat 1 76 0 6 1319 219 254 0 0 chrX 96313289 96313352 -70336944 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 1319 305 348 59 0 chrX 96313848 96313966 -70336330 - L2b LINE L2 -14 3361 3237 6 1319 779 272 71 123 chrX 96313988 96314142 -70336154 + L1M4 LINE L1 5347 5480 -704 6 1319 878 273 17 83 chrX 96314142 96314442 -70335854 + B4 SINE B4 5 284 -8 6 1319 779 272 71 123 chrX 96314442 96314475 -70335821 + L1M4 LINE L1 5481 5495 -689 6 1319 396 0 0 0 chrX 96314475 96314519 -70335777 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1319 779 272 71 123 chrX 96314519 96314825 -70335471 + L1M4 LINE L1 5496 5815 -369 6 1319 1097 191 28 38 chrX 96315148 96315360 -70334936 - B3 SINE B2 -6 210 1 6 1319 881 187 0 7 chrX 96316049 96316189 -70334107 - B1_Mur1 SINE Alu -2 147 9 6 1319 1747 268 65 23 chrX 96316611 96317180 -70333116 + L1MB7 LINE L1 5578 6170 -14 6 1319 306 318 0 35 chrX 96317441 96317555 -70332741 - MLT1A0 LTR MaLR 0 365 256 6 1319 663 177 35 0 chrX 96317563 96317676 -70332620 + ID_B1 SINE B4 102 218 -6 6 1319 720 221 70 27 chrX 96317685 96317871 -70332425 + B2_Mm2 SINE B2 2 195 0 6 1319 1073 245 112 64 chrX 96317884 96318277 -70332019 - MTD LTR MaLR 0 419 8 6 1319 382 195 26 13 chrX 96318291 96318369 -70331927 - MTD LTR MaLR -32 387 309 6 1319 510 86 0 0 chrX 96318420 96318501 -70331795 + (TC)n Simple_repeat Simple_repeat 2 82 0 6 1319 513 58 0 0 chrX 96318501 96318570 -70331726 + (CA)n Simple_repeat Simple_repeat 1 69 0 6 1319 558 272 40 0 chrX 96318579 96318704 -70331592 + ORR1D2 LTR MaLR 58 187 -183 6 1319 291 54 0 0 chrX 96318737 96318774 -70331522 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 6 1319 446 53 0 5 chrX 96318788 96318853 -70331443 - B2_Mm2 SINE B2 -107 109 47 6 1319 855 187 137 54 chrX 96318850 96318881 -70331415 + ORR1D2 LTR MaLR 150 171 -199 6 1319 1221 72 66 0 chrX 96318881 96319048 -70331248 - B2_Mm1t SINE B2 -14 179 2 6 1319 855 187 137 54 chrX 96319048 96319220 -70331076 + ORR1D2 LTR MaLR 172 370 0 6 1319 1187 237 113 3 chrX 96319221 96319505 -70330791 - MTD LTR MaLR -102 317 3 6 1319 1232 55 0 0 chrX 96319539 96319685 -70330611 + B1_Mus1 SINE Alu 2 147 -1 6 1319 243 315 41 0 chrX 96319789 96319800 -70330496 + B4A SINE B4 84 126 -166 6 1319 286 166 0 0 chrX 96319800 96319856 -70330440 + B1F SINE Alu 10 65 -84 6 1319 516 116 0 0 chrX 96320076 96320171 -70330125 + (TCTG)n Simple_repeat Simple_repeat 2 96 0 6 1319 1260 39 0 0 chrX 96320182 96320336 -70329960 + (TCCC)n Simple_repeat Simple_repeat 3 156 0 6 1319 212 93 0 44 chrX 96320699 96320744 -70329552 + (TCTCTG)n Simple_repeat Simple_repeat 5 47 0 6 1319 236 381 0 45 chrX 96320849 96320937 -70329359 - MIR SINE MIR -172 90 7 6 1319 809 234 30 25 chrX 96321351 96321548 -70328748 - B3 SINE B2 -4 212 15 6 1319 517 295 66 15 chrX 96321549 96321745 -70328551 + MLT2B4 LTR ERVL 101 306 -250 6 1319 333 0 0 0 chrX 96321926 96321963 -70328333 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1319 565 206 75 60 chrX 96321965 96322099 -70328197 - B3 SINE B2 -80 136 1 6 1319 736 258 118 63 chrX 96322100 96322464 -70327832 + L1MB7 LINE L1 5705 6088 -96 6 1319 268 262 0 0 chrX 96322608 96322669 -70327627 + L1MB7 LINE L1 6116 6176 -8 6 1319 855 243 39 10 chrX 96323690 96323894 -70326402 + B3 SINE B2 5 214 -2 6 1319 746 258 7 0 chrX 96324012 96324418 -70325878 + (TCTCTG)n Simple_repeat Simple_repeat 1 408 0 6 1319 224 302 302 0 chrX 96325017 96325186 -70325110 + MIRb SINE MIR 43 262 -6 6 1319 193 362 24 24 chrX 96328019 96328101 -70322195 + MIR SINE MIR 37 118 -144 6 1319 252 289 66 44 chrX 96328411 96328592 -70321704 - MIRb SINE MIR 0 268 84 6 1319 390 21 0 0 chrX 96328645 96328692 -70321604 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 1319 205 288 0 48 chrX 96329621 96329683 -70320613 + MIRb SINE MIR 121 179 -89 7 1319 423 0 0 0 chrX 96334535 96334582 -70315714 + (TC)n Simple_repeat Simple_repeat 1 47 0 7 1319 261 324 14 7 chrX 96334590 96334733 -70315563 + CT-rich Low_complexity Low_complexity 2 145 0 7 1319 491 280 81 35 chrX 96336040 96336214 -70314082 - MIRc SINE MIR -26 242 61 7 1320 381 22 0 0 chrX 96340125 96340171 -70310125 + (TC)n Simple_repeat Simple_repeat 2 47 0 7 1320 441 0 0 0 chrX 96340171 96340219 -70310077 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1320 214 268 54 0 chrX 96341251 96341307 -70308989 + ID4_ SINE ID 9 67 -16 7 1320 291 215 0 0 chrX 96341695 96341760 -70308536 + GA-rich Low_complexity Low_complexity 2 66 0 7 1320 22 0 0 0 chrX 96344330 96344352 -70305944 + AT_rich Low_complexity Low_complexity 1 22 0 7 1320 522 31 0 0 chrX 96347059 96347123 -70303173 + (TG)n Simple_repeat Simple_repeat 1 64 0 7 1320 461 254 49 23 chrX 96348611 96348778 -70301518 - MIR3 SINE MIR -39 169 2 7 1320 184 200 0 24 chrX 96349645 96349686 -70300610 + L2c LINE L2 3270 3309 -78 7 1320 332 252 17 145 chrX 96349893 96350065 -70300231 - MIRb SINE MIR -3 265 116 7 1320 265 357 20 0 chrX 96350077 96350175 -70300121 - MIR SINE MIR -148 114 15 7 1320 279 414 35 0 chrX 96350252 96350426 -70299870 + MIR SINE MIR 9 188 -74 7 1320 180 0 0 0 chrX 96351254 96351274 -70299022 + (CA)n Simple_repeat Simple_repeat 1 20 0 7 1320 319 366 21 7 chrX 96351542 96351685 -70298611 + L2b LINE L2 3230 3374 -1 7 1320 182 122 73 0 chrX 96352490 96352531 -70297765 + CT-rich Low_complexity Low_complexity 1 44 0 7 1320 313 150 1 2 chrX 96352984 96353048 -70297248 + B1F SINE Alu 55 145 -2 7 1320 232 256 51 13 chrX 96353958 96354037 -70296259 - PB1D9 SINE Alu -6 114 33 7 1320 202 167 0 0 chrX 96354394 96354430 -70295866 + MIRm SINE MIR 105 140 -136 7 1320 346 385 13 49 chrX 96354581 96354805 -70295491 - MIR SINE MIR -34 228 13 7 1320 224 0 0 61 chrX 96354810 96354843 -70295453 + (TCTCTG)n Simple_repeat Simple_repeat 4 34 0 7 1320 264 30 0 0 chrX 96354846 96354879 -70295417 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1320 352 194 78 14 chrX 96354892 96354993 -70295303 - B1_Mus1 SINE Alu 0 120 4 7 1320 2319 257 23 25 chrX 96355519 96356118 -70294178 + L4 LINE RTE 462 1059 -970 7 1320 261 289 164 27 chrX 96356538 96356684 -70293612 + MIRb SINE MIR 29 194 -74 7 1320 288 258 75 11 chrX 96357191 96357285 -70293011 - MIR SINE MIR -65 197 98 7 1320 482 252 55 8 chrX 96359105 96359233 -70291063 - MIRb SINE MIR -46 222 89 7 1320 565 278 20 20 chrX 96360660 96360807 -70289489 - B1F SINE Alu 0 149 3 7 1320 448 317 125 77 chrX 96361225 96361601 -70288695 - MLT1A1 LTR MaLR -2 406 13 7 1320 734 267 31 61 chrX 96361695 96362020 -70288276 - ORR1E LTR MaLR 0 379 45 7 1320 355 345 41 53 chrX 96362581 96362826 -70287470 - RLTR42-int LTR ERVK -4132 1390 1149 7 1320 276 299 18 45 chrX 96363123 96363235 -70287061 - MIRc SINE MIR -48 220 112 7 1320 486 250 101 54 chrX 96364042 96364119 -70286177 + B4A SINE B4 2 85 -207 7 1320 280 338 0 0 chrX 96364119 96364199 -70286097 + B1F2 SINE Alu 1 80 -69 7 1320 531 250 47 0 chrX 96364242 96364370 -70285926 + RSINE1 SINE B4 12 145 -20 7 1320 189 0 0 0 chrX 96364375 96364396 -70285900 + (CA)n Simple_repeat Simple_repeat 2 22 0 7 1320 203 173 0 19 chrX 96364396 96364416 -70285880 + polypurine Low_complexity Low_complexity 1 20 0 7 1320 267 31 0 0 chrX 96364416 96364448 -70285848 + (CAGA)n Simple_repeat Simple_repeat 1 32 0 7 1320 203 173 0 19 chrX 96364448 96364480 -70285816 + polypurine Low_complexity Low_complexity 21 52 0 7 1320 195 331 53 66 chrX 96364820 96364972 -70285324 + MIRb SINE MIR 18 167 -101 7 1320 429 336 0 9 chrX 96365044 96365155 -70285141 - PB1D10 SINE Alu -2 115 6 7 1320 230 308 70 28 chrX 96365173 96365328 -70284968 - MIRb SINE MIR -96 166 6 7 1320 195 217 0 0 chrX 96366340 96366400 -70283896 + CT-rich Low_complexity Low_complexity 1 60 0 7 1320 296 239 32 32 chrX 96366933 96367028 -70283268 + MIR SINE MIR 77 171 -91 7 1320 483 256 130 7 chrX 96367100 96367274 -70283022 - MLT1A1 LTR MaLR -2 406 160 7 1320 448 313 198 9 chrX 96368878 96369207 -70281089 - L2 LINE L2 -694 2725 2335 7 1320 459 276 47 27 chrX 96369355 96369504 -70280792 - B4 SINE B4 -15 277 126 7 1320 258 32 0 0 chrX 96369511 96369542 -70280754 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 1320 526 322 34 19 chrX 96369660 96369866 -70280430 + L2a LINE L2 3218 3426 0 7 1320 6172 119 9 26 chrX 96369900 96370859 -70279437 + Lx3C LINE L1 6032 6974 -2 7 1320 234 0 0 0 chrX 96370861 96370887 -70279409 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 1320 213 311 33 0 chrX 96370966 96371027 -70279269 - MIRb SINE MIR -176 92 30 7 1320 209 337 0 40 chrX 96371191 96371290 -70279006 + MIRb SINE MIR 56 150 -118 7 1320 690 284 10 24 chrX 96372594 96372800 -70277496 - MIR SINE MIR 0 262 60 7 1320 354 23 0 0 chrX 96373376 96373419 -70276877 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 1320 477 0 0 0 chrX 96373419 96373471 -70276825 + (GA)n Simple_repeat Simple_repeat 1 53 0 7 1320 370 291 188 64 chrX 96374318 96374568 -70275728 + B4 SINE B4 2 282 -10 7 1320 1244 54 0 0 chrX 96376297 96376444 -70273852 + B1_Mm SINE Alu 1 147 0 7 1320 275 356 72 67 chrX 96376879 96377280 -70273016 - L2 LINE L2 -366 3053 2651 7 1320 315 294 81 81 chrX 96378532 96378652 -70271644 + MIRb SINE MIR 82 205 -63 7 1320 331 284 12 0 chrX 96378652 96378733 -70271563 + ID4_ SINE ID 2 83 0 7 1320 313 294 81 81 chrX 96378733 96378760 -70271536 + MIRc SINE MIR 206 229 -39 7 1320 261 119 0 0 chrX 96379904 96379946 -70270350 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1320 227 366 11 0 chrX 96380035 96380128 -70270168 - MIRb SINE MIR -141 127 34 7 1320 339 279 94 28 chrX 96381017 96381188 -70269108 - MIRb SINE MIR -77 185 6 7 1320 211 197 0 129 chrX 96382690 96382760 -70267536 + MIRc SINE MIR 84 144 -124 7 1320 279 0 0 0 chrX 96383105 96383136 -70267160 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 1320 204 354 54 36 chrX 96383490 96383657 -70266639 - L3 LINE CR1 -2196 2293 2124 7 1320 216 0 0 0 chrX 96383688 96383712 -70266584 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 7 1320 414 309 63 10 chrX 96384004 96384210 -70266086 - MIR SINE MIR -2 260 44 7 1320 241 208 0 19 chrX 96384374 96384428 -70265868 + MER5A DNA MER1_type 101 153 -36 7 1320 212 234 0 0 chrX 96384549 96384596 -70265700 + CT-rich Low_complexity Low_complexity 2 48 0 7 1320 279 300 0 14 chrX 96384939 96385010 -70265286 - ID4 SINE ID -13 70 1 7 1320 596 277 11 32 chrX 96385054 96385244 -70265052 + MER5A DNA MER1_type 1 186 -3 7 1320 233 358 75 36 chrX 96387032 96387391 -70262905 + L2 LINE L2 1670 2042 -1377 7 1320 567 53 0 0 chrX 96387562 96387637 -70262659 + (CACTC)n Simple_repeat Simple_repeat 4 78 0 7 1320 315 350 138 33 chrX 96387696 96388711 -70261585 - L2a LINE L2 -1 3425 2270 7 1320 542 253 71 27 chrX 96388920 96389103 -70261193 - MIR SINE MIR -50 212 22 7 1320 395 326 65 5 chrX 96389143 96389328 -70260968 - L2a LINE L2 -1391 2028 1833 7 1320 396 300 0 0 chrX 96389347 96389447 -70260849 - PB1D10 SINE Alu -6 111 12 7 1320 250 230 34 34 chrX 96389455 96389525 -70260771 + CT-rich Low_complexity Low_complexity 50 119 0 7 1320 845 60 0 8 chrX 96389525 96389642 -70260654 + (TCTCC)n Simple_repeat Simple_repeat 3 118 0 7 1320 250 230 34 34 chrX 96389642 96389688 -70260608 + polypyrimidine Low_complexity Low_complexity 3 49 0 7 1320 244 301 84 50 chrX 96389762 96389881 -70260415 - RMER15 LTR ERVL -31 544 422 7 1320 226 330 28 19 chrX 96389984 96390092 -70260204 - Lx8 LINE L1 -331 7142 7034 7 1320 378 0 0 0 chrX 96390572 96390614 -70259682 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 7 1320 201 310 69 0 chrX 96392729 96392816 -70257480 - MIR3 SINE MIR -112 96 4 7 1320 387 340 90 35 chrX 96393030 96393231 -70257065 - MIR SINE MIR -17 245 34 7 1320 1174 180 9 5 chrX 96393231 96393449 -70256847 + URR1B DNA MER1_type 6 224 -1 7 1320 25 0 0 0 chrX 96393971 96393996 -70256300 + GC_rich Low_complexity Low_complexity 1 25 0 7 1320 235 304 107 10 chrX 96394189 96394292 -70256004 - MIRb SINE MIR -99 169 57 7 1320 307 229 36 12 chrX 96394593 96394677 -70255619 + C-rich Low_complexity Low_complexity 4 89 0 7 1320 182 245 0 36 chrX 96395552 96395607 -70254689 + MIRm SINE MIR 185 237 -39 7 1320 336 328 53 21 chrX 96396238 96396428 -70253868 + MER91A DNA Tip100 1 196 0 7 1320 432 158 0 0 chrX 96398458 96398534 -70251762 + GA-rich Low_complexity Low_complexity 2 77 0 7 1320 738 216 8 0 chrX 96398545 96398679 -70251617 + B1_Mur1 SINE Alu 5 139 -10 7 1320 489 258 107 23 chrX 96398705 96398836 -70251460 + B1F1 SINE Alu 1 142 -7 7 1320 2351 148 20 22 chrX 96398864 96399266 -70251030 + RLTR9D LTR ERVK 1 401 -2 7 1320 500 231 72 36 chrX 96399266 96399405 -70250891 + B1F SINE Alu 6 149 0 7 1320 293 220 38 16 chrX 96400933 96401033 -70249263 + PB1D7 SINE Alu 1 104 -43 7 1320 852 102 0 0 chrX 96401089 96401236 -70249060 + (CA)n Simple_repeat Simple_repeat 2 148 0 8 1320 531 0 0 0 chrX 96401236 96401294 -70249002 + (GA)n Simple_repeat Simple_repeat 2 60 0 8 1320 198 0 0 0 chrX 96401712 96401734 -70248562 + (TTCTC)n Simple_repeat Simple_repeat 2 23 0 8 1320 245 257 0 13 chrX 96401859 96401934 -70248362 + CT-rich Low_complexity Low_complexity 1 74 0 8 1320 1077 329 107 23 chrX 96402009 96402746 -70247550 - L1MB1 LINE L1 -12 6156 5358 8 1320 199 341 37 89 chrX 96402968 96403067 -70247229 + MIRb SINE MIR 27 127 -141 8 1320 2563 149 58 0 chrX 96403067 96403462 -70246834 - MTC LTR MaLR 0 421 4 8 1320 199 341 37 89 chrX 96403462 96403552 -70246744 + MIRb SINE MIR 128 206 -62 8 1320 428 232 10 31 chrX 96403744 96403842 -70246454 + MLT1A LTR MaLR 1 96 -278 8 1320 832 270 92 26 chrX 96403840 96403982 -70246314 + MTEb LTR MaLR 20 187 -192 8 1320 204 40 0 0 chrX 96403982 96404007 -70246289 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 8 1320 832 267 67 26 chrX 96404007 96404184 -70246112 + MTEb LTR MaLR 188 375 -4 8 1320 3687 276 74 103 chrX 96404194 96405754 -70244542 + MTE-int LTR MaLR 65 1578 -2 8 1320 441 0 0 0 chrX 96405830 96405879 -70244417 + (TA)n Simple_repeat Simple_repeat 1 49 0 8 1320 2836 219 111 13 chrX 96405909 96406613 -70243683 + Lx8 LINE L1 6376 7148 -325 8 1320 233 167 21 0 chrX 96406651 96406699 -70243597 + (CAA)n Simple_repeat Simple_repeat 3 51 0 8 1320 270 268 45 96 chrX 96406858 96407015 -70243281 + MLT1A LTR MaLR 231 379 -11 8 1320 441 280 136 0 chrX 96408108 96408226 -70242070 - RSINE1 SINE B4 -26 139 6 8 1320 187 320 99 46 chrX 96408800 96408931 -70241365 - MIRb SINE MIR -15 253 116 8 1320 218 295 40 40 chrX 96409495 96409594 -70240702 + L3 LINE CR1 4223 4321 -187 8 1320 236 250 0 0 chrX 96410786 96410834 -70239462 + L3 LINE CR1 4440 4487 -2 8 1320 240 236 0 0 chrX 96411161 96411250 -70239046 + CT-rich Low_complexity Low_complexity 2 90 0 8 1320 273 29 0 0 chrX 96411295 96411329 -70238967 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 1320 647 270 32 16 chrX 96411569 96411794 -70238502 + MER102b DNA MER1_type 6 234 -107 8 1320 276 389 28 28 chrX 96414017 96414160 -70236136 + MIR3 SINE MIR 39 181 -27 8 1320 386 295 75 55 chrX 96416337 96416528 -70233768 + MIR3 SINE MIR 18 207 -1 8 1320 191 336 35 52 chrX 96416768 96416884 -70233412 + MIRm SINE MIR 41 154 -122 8 1320 557 333 106 22 chrX 96416885 96417299 -70232997 - MLT1L LTR MaLR -15 595 147 8 1320 243 88 0 0 chrX 96417316 96417350 -70232946 + (CAAG)n Simple_repeat Simple_repeat 1 34 0 8 1320 323 243 165 18 chrX 96417351 96417460 -70232836 + MER5B DNA MER1_type 53 177 -1 8 1320 386 213 13 0 chrX 96417779 96417854 -70232442 + ID4 SINE ID 2 77 -6 8 1320 252 59 0 0 chrX 96417927 96417961 -70232335 + (TCTCTG)n Simple_repeat Simple_repeat 3 36 0 8 1320 267 54 0 0 chrX 96417961 96417997 -70232299 + (CA)n Simple_repeat Simple_repeat 1 37 0 8 1320 306 0 0 0 chrX 96418237 96418271 -70232025 + (TG)n Simple_repeat Simple_repeat 1 34 0 8 1320 432 0 0 0 chrX 96418271 96418318 -70231978 + (GA)n Simple_repeat Simple_repeat 1 48 0 8 1320 232 382 12 31 chrX 96419359 96419521 -70230775 + MIR3 SINE MIR 1 159 -49 8 1320 270 56 0 0 chrX 96422051 96422087 -70228209 + (T)n Simple_repeat Simple_repeat 1 36 0 8 1320 327 252 37 55 chrX 96423887 96423996 -70226300 + PB1D10 SINE Alu 11 117 0 8 1320 702 346 56 10 chrX 96424704 96425053 -70225243 - MER47B DNA MER2_type -2 364 1 8 1320 197 238 0 31 chrX 96425458 96425523 -70224773 + (TATG)n Simple_repeat Simple_repeat 2 64 0 8 1320 440 276 8 8 chrX 96425527 96425644 -70224652 - PB1D10 SINE Alu 0 117 1 8 1320 267 360 14 29 chrX 96425858 96425998 -70224298 - L2 LINE L2 -928 2491 2354 8 1320 363 289 21 0 chrX 96426823 96426836 -70223460 - PB1D10 SINE Alu -18 99 87 8 1320 423 0 0 0 chrX 96426836 96426883 -70223413 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1320 363 289 21 0 chrX 96426883 96426966 -70223330 - PB1D10 SINE Alu -31 86 2 8 1320 265 273 13 25 chrX 96427025 96427104 -70223192 - PB1D10 SINE Alu 0 117 40 8 1320 247 372 86 53 chrX 96427199 96427443 -70222853 + MIRb SINE MIR 16 267 -1 8 1320 428 283 26 0 chrX 96428951 96429064 -70221232 - PB1D10 SINE Alu -1 116 1 8 1320 315 347 0 80 chrX 96429927 96430090 -70220206 + MIR SINE MIR 8 157 -105 8 1320 215 218 18 0 chrX 96430144 96430199 -70220097 + MIRb SINE MIR 175 230 -38 8 1320 437 342 43 11 chrX 96430201 96430387 -70219909 + MER58A DNA MER1_type 1 192 -32 8 1320 22 0 0 0 chrX 96430431 96430453 -70219843 + AT_rich Low_complexity Low_complexity 1 22 0 8 1320 250 303 51 21 chrX 96430454 96430551 -70219745 - MIR SINE MIR -110 158 55 8 1320 1250 54 0 0 chrX 96431233 96431381 -70218915 - B1_Mus1 SINE Alu 0 148 1 8 1320 977 53 130 0 chrX 96433307 96433438 -70216858 + B1_Mus1 SINE Alu 1 148 0 8 1320 225 204 0 0 chrX 96433438 96433482 -70216814 + A-rich Low_complexity Low_complexity 1 44 0 8 1320 255 337 124 45 chrX 96433559 96433672 -70216624 + MTEa LTR MaLR 3 131 -248 8 1320 297 0 0 0 chrX 96433672 96433705 -70216591 + (TG)n Simple_repeat Simple_repeat 1 33 0 8 1320 357 274 71 52 chrX 96433705 96433922 -70216374 + MTEa LTR MaLR 132 379 0 8 1320 315 275 52 75 chrX 96434099 96434272 -70216024 - HAL1-2a_MD LINE L1 -517 2507 2339 8 1320 231 410 107 5 chrX 96435402 96435608 -70214688 + MIRb SINE MIR 25 251 -17 8 1320 461 296 23 0 chrX 96435841 96435973 -70214323 + MIRc SINE MIR 87 221 -47 8 1320 381 310 73 109 chrX 96436561 96436836 -70213460 - ORR1E LTR MaLR -13 346 82 8 1320 254 115 19 0 chrX 96437602 96437654 -70212642 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 8 1320 594 165 0 0 chrX 96437659 96437786 -70212510 + (TG)n Simple_repeat Simple_repeat 2 128 0 8 1320 410 332 69 20 chrX 96439125 96439371 -70210925 - L2a LINE L2 -154 3272 3015 8 1320 456 51 0 0 chrX 96439563 96439622 -70210674 + (TG)n Simple_repeat Simple_repeat 1 59 0 8 1320 461 336 74 13 chrX 96439883 96440127 -70210169 - MIR SINE MIR 0 268 7 8 1320 318 26 0 0 chrX 96440604 96440643 -70209653 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 1320 521 319 36 16 chrX 96441147 96441341 -70208955 + MIR SINE MIR 61 258 -4 8 1320 372 329 1 1 chrX 96441785 96441899 -70208397 - MIRc SINE MIR -142 126 9 8 1320 353 350 56 65 chrX 96441993 96442225 -70208071 + Charlie8 DNA MER1_type 3 232 -2196 8 1320 186 294 39 0 chrX 96442908 96442959 -70207337 - MIRc SINE MIR -142 126 74 8 1320 367 285 45 15 chrX 96444001 96444133 -70206163 + MIR SINE MIR 114 249 -13 8 1320 225 306 28 0 chrX 96445482 96445554 -70204742 - MIR3 SINE MIR -54 154 81 8 1320 1208 55 7 0 chrX 96445701 96445847 -70204449 - B1_Mm SINE Alu 0 147 1 8 1320 281 279 0 0 chrX 96446501 96446569 -70203727 - ID2 SINE ID -11 72 5 8 1320 365 322 15 86 chrX 96446604 96446801 -70203495 + MIRb SINE MIR 5 187 -89 8 1320 463 290 7 21 chrX 96447050 96447191 -70203105 - B1F SINE Alu 0 149 11 8 1320 311 332 37 33 chrX 96447583 96447798 -70202498 + L2a LINE L2 2689 2904 -515 8 1320 297 301 58 0 chrX 96447834 96447937 -70202359 - MER5B DNA MER1_type -36 142 34 8 1320 1486 232 31 49 chrX 96447939 96448138 -70202158 + MTEa LTR MaLR 1 194 -185 8 1320 474 33 0 0 chrX 96448138 96448198 -70202098 + (TC)n Simple_repeat Simple_repeat 1 60 0 8 1320 1486 232 31 49 chrX 96448198 96448384 -70201912 + MTEa LTR MaLR 195 379 0 8 1320 2496 270 75 37 chrX 96448427 96449257 -70201039 + MTE-int LTR MaLR 49 909 -671 8 1320 1025 239 87 108 chrX 96449257 96449637 -70200659 + MTEa LTR MaLR 1 372 -7 8 1320 656 322 87 51 chrX 96449755 96450226 -70200070 + L2a LINE L2 2934 3421 -5 8 1320 1525 303 46 36 chrX 96450340 96450548 -70199748 + L1MB5 LINE L1 873 1094 -5290 8 1320 575 301 87 10 chrX 96450548 96450756 -70199540 + ID_B1 SINE B4 1 224 0 8 1320 1525 303 46 36 chrX 96450756 96451468 -70198828 + L1MB5 LINE L1 1095 1802 -4582 8 1320 228 35 0 0 chrX 96451643 96451672 -70198624 + (CCA)n Simple_repeat Simple_repeat 3 31 0 8 1320 246 327 112 28 chrX 96452044 96452151 -70198145 - PB1D10 SINE Alu 0 117 2 8 1320 1500 269 64 97 chrX 96452152 96453398 -70196898 + L1MB5 LINE L1 2473 3677 -2705 8 1320 220 259 11 76 chrX 96453585 96453677 -70196619 + PB1 SINE Alu 41 126 -1 8 1320 1024 229 128 112 chrX 96453705 96454181 -70196115 + L1MB5 LINE L1 4605 5129 -1253 8 1320 1147 76 0 0 chrX 96454181 96454326 -70195970 - B1_Mus2 SINE Alu -1 146 2 8 1320 1024 229 128 112 chrX 96454326 96454541 -70195755 + L1MB5 LINE L1 5130 5282 -1100 8 1320 441 0 0 0 chrX 96454541 96454590 -70195706 + (TTATA)n Simple_repeat Simple_repeat 3 51 0 8 1320 1024 229 128 112 chrX 96454590 96454679 -70195617 + L1MB5 LINE L1 5283 5397 -985 8 1320 218 227 0 0 chrX 96454679 96454723 -70195573 - B1F2 SINE Alu -96 53 10 8 1320 1720 293 119 12 chrX 96454738 96455460 -70194836 + L1MB5 LINE L1 5546 6344 -66 8 1320 2389 230 53 21 chrX 96455636 96456261 -70194035 - L1MD2 LINE L1 -226 6133 5489 8 1320 1839 237 107 109 chrX 96456246 96456825 -70193471 - L1MC LINE L1 -2719 3427 2816 8 1320 268 271 0 0 chrX 96456825 96456884 -70193412 - B1F2 SINE Alu -89 60 2 8 1320 1839 237 107 109 chrX 96456884 96457263 -70193033 - L1MC LINE L1 -2719 2815 2413 8 1320 330 313 26 0 chrX 96457640 96457755 -70192541 + L1MA9 LINE L1 1513 1630 -5407 8 1320 323 278 21 0 chrX 96457879 96457976 -70192320 + L1MA9 LINE L1 2012 2110 -4920 8 1320 247 323 20 20 chrX 96458163 96458261 -70192035 + B4 SINE B4 3 100 -192 8 1320 1171 296 80 24 chrX 96458494 96458848 -70191448 + L1MA9 LINE L1 2343 2725 -4382 8 1320 423 0 0 0 chrX 96458848 96458895 -70191401 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1320 1171 296 80 24 chrX 96458895 96459081 -70191215 + L1MA9 LINE L1 2726 2913 -4194 8 1320 655 241 197 18 chrX 96459210 96459438 -70190858 + B4A SINE B4 20 288 -4 8 1320 371 292 56 42 chrX 96459566 96459709 -70190587 + B1F2 SINE Alu 2 146 -3 8 1320 7154 233 88 19 chrX 96459923 96462126 -70188170 + L1MA9 LINE L1 3070 5425 -1675 8 1320 365 299 92 33 chrX 96462207 96462359 -70187937 + L1MA9 LINE L1 6278 6438 -711 8 1320 5678 118 29 5 chrX 96462380 96463230 -70187066 - Lx LINE L1 -1 6653 5783 8 1320 780 41 0 0 chrX 96463230 96463321 -70186975 + (TTC)n Simple_repeat Simple_repeat 1 91 0 8 1320 1395 51 0 0 chrX 96463321 96463497 -70186799 + (TTCTCC)n Simple_repeat Simple_repeat 3 178 0 8 1320 780 41 0 0 chrX 96463497 96463503 -70186793 + (TTC)n Simple_repeat Simple_repeat 1 6 0 8 1320 1840 80 166 4 chrX 96463503 96463780 -70186516 - L1_Mus3 LINE L1 -17 6621 6300 8 1320 1150 16 0 0 chrX 96463779 96463908 -70186388 - L1_Mus4 LINE L1 -857 5779 5651 9 1320 1392 230 118 30 chrX 96463913 96464387 -70185909 + L1MA9 LINE L1 6474 6989 -283 8 1320 751 182 15 0 chrX 96464514 96464651 -70185645 - Lx6 LINE L1 -53 7407 7269 9 1320 336 284 149 0 chrX 96464662 96464796 -70185500 - L1MCa LINE L1 -6231 277 124 9 1320 555 259 52 11 chrX 96464835 96465026 -70185270 - L1MDa LINE L1 -3016 3521 3323 9 1320 817 287 133 22 chrX 96465044 96465599 -70184697 - L1MDa LINE L1 -4333 2300 1684 9 1320 349 308 66 66 chrX 96465657 96465883 -70184413 - L1MDa LINE L1 -5154 1479 1247 9 1320 721 299 144 58 chrX 96465899 96466650 -70183646 - L1MDa LINE L1 -5453 1180 124 9 1320 244 242 48 0 chrX 96466711 96466773 -70183523 - L1MDa LINE L1 -6539 94 30 9 1321 1467 59 11 5 chrX 96469267 96469455 -70180841 - B2_Mm1t SINE B2 -3 190 2 9 1321 212 86 29 0 chrX 96471445 96471480 -70178816 + (CTA)n Simple_repeat Simple_repeat 2 37 0 9 1321 1576 203 100 3 chrX 96472379 96472750 -70177546 + MTD LTR MaLR 10 416 -3 9 1321 3406 232 127 51 chrX 96472765 96473908 -70176388 + MTD-int LTR MaLR 20 1249 -9 9 1321 186 43 0 0 chrX 96473941 96473964 -70176332 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 9 1321 1855 213 33 0 chrX 96473964 96474353 -70175943 + MTD LTR MaLR 18 419 0 9 1321 577 302 0 0 chrX 96475171 96475310 -70174986 - B1F SINE Alu -9 140 2 9 1321 460 238 0 69 chrX 96475683 96475814 -70174482 - MIR SINE MIR -72 190 69 9 1321 229 326 148 6 chrX 96476678 96476854 -70173442 + MIRb SINE MIR 68 268 0 9 1321 276 348 19 6 chrX 96477060 96477222 -70173074 + (CATG)n Simple_repeat Simple_repeat 4 167 0 9 1321 235 357 31 31 chrX 96477233 96477392 -70172904 + MIRc SINE MIR 88 246 -22 9 1321 321 359 23 37 chrX 96477667 96477881 -70172415 + MIR SINE MIR 21 231 -31 9 1321 450 0 0 0 chrX 96478287 96478337 -70171959 + (TG)n Simple_repeat Simple_repeat 1 50 0 9 1321 392 245 32 0 chrX 96478337 96478431 -70171865 - B1F SINE Alu -15 134 38 9 1321 189 0 0 0 chrX 96479030 96479051 -70171245 + (TG)n Simple_repeat Simple_repeat 1 21 0 9 1321 1379 137 27 0 chrX 96479786 96480005 -70170291 + URR1B DNA MER1_type 1 225 0 9 1321 320 259 12 12 chrX 96480156 96480238 -70170058 - ID4_ SINE ID 0 83 2 9 1321 268 197 66 0 chrX 96481949 96482025 -70168271 + CT-rich Low_complexity Low_complexity 4 84 0 9 1321 204 311 13 26 chrX 96482205 96482281 -70168015 + CT-rich Low_complexity Low_complexity 5 79 0 9 1321 316 326 159 10 chrX 96482842 96483460 -70166836 - L2a LINE L2 -44 3382 2667 9 1321 323 325 29 17 chrX 96484528 96484700 -70165596 - MIRb SINE MIR -39 229 56 9 1321 458 282 27 0 chrX 96485373 96485483 -70164813 - PB1D10 SINE Alu -1 116 4 9 1321 350 253 19 144 chrX 96485495 96485684 -70164612 - MIRm SINE MIR -99 177 6 9 1321 285 327 77 59 chrX 96485822 96486043 -70164253 + MIR SINE MIR 30 254 -8 9 1321 570 67 0 0 chrX 96486899 96486974 -70163322 + (GGGA)n Simple_repeat Simple_repeat 1 75 0 9 1321 225 236 164 17 chrX 96487559 96487705 -70162591 - MIRb SINE MIR -87 181 19 9 1321 392 236 0 0 chrX 96487897 96487969 -70162327 + PB1D10 SINE Alu 34 105 -12 9 1321 244 284 40 0 chrX 96487991 96488065 -70162231 + ID4 SINE ID 6 82 -1 9 1321 369 272 62 31 chrX 96488958 96489087 -70161209 - L2a LINE L2 0 3426 3294 9 1321 441 0 0 0 chrX 96489092 96489141 -70161155 + (TC)n Simple_repeat Simple_repeat 2 50 0 9 1321 423 0 0 0 chrX 96489141 96489187 -70161109 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 1321 445 260 72 72 chrX 96489254 96489461 -70160835 - MTEb LTR MaLR -170 209 3 9 1321 434 309 102 46 chrX 96489468 96489928 -70160368 - L2a LINE L2 -278 3148 2656 9 1321 424 295 36 7 chrX 96491488 96491628 -70158668 + HAL1 LINE L1 787 930 -1577 9 1321 363 389 59 11 chrX 96491661 96491947 -70158349 - MLT1I LTR MaLR -39 372 73 9 1321 4247 205 95 37 chrX 96492324 96493395 -70156901 + Lx9 LINE L1 6510 7642 -2 9 1321 422 261 8 17 chrX 96493582 96493699 -70156597 + PB1D10 SINE Alu 2 117 0 9 1321 264 333 44 29 chrX 96493732 96493868 -70156428 - L2b LINE L2 0 3375 3238 9 1321 288 266 21 31 chrX 96494069 96494166 -70156130 + GA-rich Low_complexity Low_complexity 2 97 0 9 1321 896 298 47 31 chrX 96494166 96494616 -70155680 - L1M5 LINE L1 -913 5233 4777 9 1321 666 307 44 49 chrX 96494765 96495173 -70155123 - L1M5 LINE L1 -1399 4747 4342 9 1321 3167 284 57 36 chrX 96495189 96496437 -70153859 - L1MC3 LINE L1 -2 7783 6510 9 1321 455 342 51 100 chrX 96496450 96496809 -70153487 + ORR1E LTR MaLR 1 370 0 9 1321 1835 260 64 40 chrX 96496809 96497529 -70152767 - L1MC3 LINE L1 -1284 6501 5763 9 1321 1208 54 0 0 chrX 96497641 96497789 -70152507 + B1_Mus1 SINE Alu 1 148 0 9 1321 260 276 0 0 chrX 96497816 96497874 -70152422 + B1F2 SINE Alu 1 58 -91 9 1321 1441 298 73 112 chrX 96497885 96498435 -70151861 - L1MC3 LINE L1 -1010 5136 4579 9 1321 237 170 0 0 chrX 96498435 96498482 -70151814 + ID4_ SINE ID 5 51 -32 9 1321 215 206 157 29 chrX 96498482 96498505 -70151791 + ID SINE ID 5 83 -141 9 1321 1441 298 73 112 chrX 96498505 96499157 -70151139 - L1MC3 LINE L1 -1010 4578 3916 9 1321 1119 263 17 21 chrX 96499157 96499448 -70150848 - B4A SINE B4 -2 290 1 9 1321 1441 298 73 112 chrX 96499448 96499468 -70150828 - L1MC3 LINE L1 -2231 3915 3895 9 1321 429 218 15 0 chrX 96499543 96499650 -70150646 - PB1D10 SINE Alu -5 112 5 9 1321 268 330 9 9 chrX 96499557 96499667 -70150629 - ID_B1 SINE B4 -45 179 70 9 1321 768 284 42 17 chrX 96499673 96499960 -70150336 - L1MC3 LINE L1 -2300 3846 3553 9 1321 1747 224 43 52 chrX 96500001 96500137 -70150159 - L1MC LINE L1 -2683 3463 3332 1 1321 476 244 8 17 chrX 96500137 96500254 -70150042 - PB1D10 SINE Alu -1 116 1 2 1321 1747 224 43 52 chrX 96500254 96500747 -70149549 - L1MC LINE L1 -2815 3331 2840 1 1321 292 348 51 40 chrX 96500779 96501054 -70149242 - L1MEe LINE L1 -1859 4287 4010 3 1321 2592 7 0 0 chrX 96501375 96501659 -70148637 - L1Md_A LINE L1 0 6582 6299 4 1321 274 265 0 12 chrX 96501873 96501954 -70148342 - MLT1F2 LTR MaLR 0 560 484 5 1321 265 228 17 34 chrX 96501944 96501994 -70148302 + ID4 SINE ID 11 61 -22 6 1321 990 76 30 0 chrX 96501994 96502126 -70148170 + B1_Mus1 SINE Alu 1 136 -12 7 1321 265 145 5 530 chrX 96502126 96502174 -70148122 + ID4 SINE ID 49 83 0 6 1321 353 214 0 0 chrX 96502226 96502296 -70148000 - B1F SINE Alu 0 149 80 8 1321 682 330 97 67 chrX 96502303 96502768 -70147528 - MLT1F2 LTR MaLR -77 483 5 5 1321 14977 130 33 12 chrX 96502791 96506339 -70143957 - Lx4B LINE L1 -5 7053 3430 9 1321 369 0 0 0 chrX 96506424 96506465 -70143831 + (CTA)n Simple_repeat Simple_repeat 1 41 0 1 1321 241 298 45 2 chrX 96506526 96506599 -70143697 - B4A SINE B4 -216 76 1 1 1321 519 56 0 0 chrX 96506750 96506821 -70143475 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 1321 273 278 165 50 chrX 96507149 96507160 -70143136 - B1_Mur1 SINE Alu -2 147 140 1 1321 189 0 0 0 chrX 96507160 96507181 -70143115 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 1321 273 278 165 50 chrX 96507181 96507290 -70143006 - B1_Mur1 SINE Alu -10 139 13 1 1321 805 257 50 11 chrX 96507305 96507486 -70142810 + B3 SINE B2 29 216 0 1 1321 323 237 117 58 chrX 96507541 96507644 -70142652 - PB1D10 SINE Alu -8 109 1 1 1321 731 280 53 16 chrX 96507952 96508485 -70141811 - L1MEe LINE L1 -3737 2409 1873 3 1321 290 301 0 70 chrX 96509557 96509657 -70140639 - MLT1K LTR MaLR -10 585 493 1 1321 288 130 0 0 chrX 96509928 96509974 -70140322 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 1 1321 720 292 53 36 chrX 96509974 96510199 -70140097 - ID_B1 SINE B4 -46 246 2 1 1321 496 214 62 23 chrX 96510227 96510356 -70139940 - B1F SINE Alu -11 138 5 2 1321 257 408 135 5 chrX 96510364 96510571 -70139725 - MLT1K LTR MaLR -315 280 47 2 1321 214 189 0 26 chrX 96510576 96510614 -70139682 + ID SINE ID 34 70 -154 2 1321 1913 119 43 75 chrX 96510658 96511003 -70139293 - RMER19B LTR ERVK -12 890 557 2 1321 392 308 8 0 chrX 96511062 96511179 -70139117 - PB1D7 SINE Alu -2 118 1 2 1321 346 221 152 42 chrX 96511394 96511512 -70138784 + MIR3 SINE MIR 37 167 -101 2 1321 188 67 0 32 chrX 96511560 96511591 -70138705 + (GGGA)n Simple_repeat Simple_repeat 1 30 0 2 1321 184 320 107 29 chrX 96512393 96512496 -70137800 - L3b LINE CR1 -264 218 108 2 1321 351 0 0 0 chrX 96512655 96512694 -70137602 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1321 245 322 87 74 chrX 96513818 96513974 -70136322 - MIRb SINE MIR -65 197 47 2 1321 198 0 0 0 chrX 96515639 96515661 -70134635 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 3 1321 421 300 25 78 chrX 96515681 96516067 -70134229 + MLT1A1 LTR MaLR 6 408 0 3 1321 1147 81 4 209 chrX 96516118 96516353 -70133943 + B2_Mm1t SINE B2 2 188 -5 3 1321 2102 144 42 11 chrX 96517161 96517539 -70132757 + RLTR9D LTR ERVK 14 403 0 3 1321 444 281 14 7 chrX 96517582 96517722 -70132574 + B1F SINE Alu 1 141 -8 3 1321 350 57 19 0 chrX 96521321 96521374 -70128922 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 1321 351 268 30 68 chrX 96521983 96522115 -70128181 - L2a LINE L2 0 3426 3300 3 1321 293 252 22 25 chrX 96522577 96522668 -70127628 - MIR SINE MIR -86 182 92 3 1321 4560 158 84 13 chrX 96522934 96523121 -70127175 - RMER19B LTR ERVK 0 902 706 3 1321 198 0 0 0 chrX 96523121 96523143 -70127153 + (CAG)n Simple_repeat Simple_repeat 1 22 0 3 1321 4560 158 84 13 chrX 96523143 96523564 -70126732 - RMER19B LTR ERVK -197 705 245 3 1321 432 0 0 0 chrX 96523564 96523612 -70126684 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1321 4560 158 84 13 chrX 96523612 96523844 -70126452 - RMER19B LTR ERVK -658 244 5 3 1321 358 313 39 91 chrX 96524620 96524735 -70125561 + MIRb SINE MIR 13 120 -148 4 1321 2371 87 15 6 chrX 96524735 96525060 -70125236 + ORR1A4 LTR MaLR 1 328 -1 4 1321 358 313 39 91 chrX 96525060 96525176 -70125120 + MIRb SINE MIR 121 232 -36 4 1321 200 358 32 39 chrX 96525797 96525951 -70124345 + MIR3 SINE MIR 6 158 -50 4 1321 223 312 49 12 chrX 96526143 96526224 -70124072 + L2b LINE L2 3251 3334 -41 4 1321 351 0 0 0 chrX 96526423 96526462 -70123834 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 4 1321 192 362 103 8 chrX 96526984 96527101 -70123195 + MIRb SINE MIR 46 173 -95 4 1321 834 11 0 0 chrX 96527442 96527537 -70122759 + (TC)n Simple_repeat Simple_repeat 1 95 0 4 1321 252 0 0 0 chrX 96527784 96527812 -70122484 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1321 242 261 213 25 chrX 96528066 96528188 -70122108 + L1M5 LINE L1 5522 5666 -458 4 1321 509 235 36 7 chrX 96528192 96528329 -70121967 + B1F SINE Alu 1 141 -8 5 1321 320 127 159 0 chrX 96528577 96528640 -70121656 + PB1D10 SINE Alu 40 112 -5 5 1321 189 0 0 0 chrX 96528892 96528913 -70121383 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 1321 578 312 103 8 chrX 96529406 96529658 -70120638 + MER2 DNA MER2_type 31 306 -39 5 1321 304 321 59 30 chrX 96530146 96530281 -70120015 + MIR3 SINE MIR 15 153 -55 5 1321 1000 165 133 0 chrX 96530950 96531138 -70119158 + URR1A DNA MER1_type 14 226 0 5 1321 222 270 135 0 chrX 96533045 96533119 -70117177 - MIRc SINE MIR -138 130 47 5 1321 276 224 0 79 chrX 96533202 96533265 -70117031 - ID2 SINE ID -23 60 3 5 1321 491 263 30 8 chrX 96533278 96533412 -70116884 - B1F1 SINE Alu -6 143 7 5 1321 707 303 45 8 chrX 96533850 96534093 -70116203 - MIR SINE MIR -6 256 5 5 1321 486 0 0 0 chrX 96534544 96534598 -70115698 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1321 307 331 8 8 chrX 96535112 96535240 -70115056 + CT-rich Low_complexity Low_complexity 2 129 0 6 1321 183 286 140 19 chrX 96535370 96535477 -70114819 + MIR SINE MIR 16 135 -73 6 1321 469 226 33 42 chrX 96535701 96535821 -70114475 + PB1D7 SINE Alu 2 120 0 6 1321 201 128 24 49 chrX 96536123 96536164 -70114132 + C-rich Low_complexity Low_complexity 1 40 0 6 1321 276 30 0 0 chrX 96536261 96536294 -70114002 + (TCC)n Simple_repeat Simple_repeat 3 35 0 6 1321 811 246 121 67 chrX 96536508 96536771 -70113525 - MER2 DNA MER2_type -1 344 67 6 1321 267 31 0 0 chrX 96536771 96536803 -70113493 + (CCA)n Simple_repeat Simple_repeat 1 32 0 6 1321 811 246 121 67 chrX 96536803 96536852 -70113444 - MER2 DNA MER2_type -279 66 15 6 1321 274 303 25 66 chrX 96536900 96537027 -70113269 - L1M5 LINE L1 -631 5542 5424 6 1321 458 239 54 68 chrX 96537027 96537175 -70113121 - B1_Mur1 SINE Alu -2 147 2 6 1321 277 238 42 38 chrX 96537175 96537291 -70113005 - L1M5 LINE L1 -750 5423 5309 6 1321 1008 86 0 0 chrX 96537345 96537485 -70112811 + (TCTCC)n Simple_repeat Simple_repeat 3 142 0 7 1321 456 273 0 0 chrX 96537485 96537595 -70112701 - PB1D10 SINE Alu -7 110 1 7 1321 392 299 8 45 chrX 96537831 96537964 -70112332 - Lx8 LINE L1 -202 7271 7144 7 1321 680 258 77 16 chrX 96538065 96538313 -70111983 - L1MA6 LINE L1 -1 6299 6037 7 1321 372 294 129 32 chrX 96538310 96538496 -70111800 - L1M5 LINE L1 -1099 5047 4844 6 1321 432 257 19 181 chrX 96538611 96538760 -70111536 - L1MC LINE L1 -2146 4000 3868 7 1321 468 0 0 0 chrX 96538760 96538812 -70111484 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 1321 708 12 0 0 chrX 96538812 96538892 -70111404 + (CA)n Simple_repeat Simple_repeat 1 81 0 7 1321 432 257 19 181 chrX 96538892 96538928 -70111368 - L1MC LINE L1 -2279 3867 3853 7 1321 413 225 0 12 chrX 96538928 96539009 -70111287 - ID4 SINE ID -1 82 3 7 1321 432 257 19 181 chrX 96539009 96539070 -70111226 - L1MC LINE L1 -2294 3852 3794 7 1321 1900 147 75 20 chrX 96539070 96539267 -70111029 - ORR1B2 LTR MaLR 0 367 171 7 1321 561 15 0 0 chrX 96539267 96539333 -70110963 + (GA)n Simple_repeat Simple_repeat 1 66 0 7 1321 1900 147 75 20 chrX 96539333 96539483 -70110813 - ORR1B2 LTR MaLR -197 170 2 7 1321 432 257 19 181 chrX 96539483 96539542 -70110754 - L1MC LINE L1 -2353 3793 3744 7 1321 2262 241 126 50 chrX 96539550 96540034 -70110262 - L1MD1 LINE L1 -15 6227 5675 8 1321 432 0 0 0 chrX 96540034 96540082 -70110214 + (TG)n Simple_repeat Simple_repeat 1 48 0 8 1321 3656 241 74 51 chrX 96540082 96541631 -70108665 - L1MD1 LINE L1 -568 5674 4100 8 1321 1150 273 241 10 chrX 96541626 96542233 -70108063 - L1MD1 LINE L1 -2218 3928 3182 8 1321 604 273 15 80 chrX 96542246 96542509 -70107787 - L1M5 LINE L1 -2330 3816 3571 6 1321 319 321 98 35 chrX 96542594 96542768 -70107528 - MIRb SINE MIR -15 253 69 8 1321 220 325 52 0 chrX 96542793 96542870 -70107426 + ID_B1 SINE B4 13 93 -131 8 1321 258 321 3 3 chrX 96543030 96543122 -70107174 - MIRc SINE MIR -116 160 69 8 1321 3394 110 31 28 chrX 96543191 96543732 -70106564 + RLTR13D6 LTR ERVK 1 543 -359 8 1321 2993 61 5 0 chrX 96543705 96544080 -70106216 + RLTR13D6 LTR ERVK 227 603 -203 8 1321 215 331 37 37 chrX 96544057 96544192 -70106104 - B1_Mus1 SINE Alu -1 147 13 8 1321 301 338 30 8 chrX 96544266 96544400 -70105896 + MIRc SINE MIR 51 187 -81 8 1321 203 366 11 0 chrX 96545508 96545601 -70104695 + MER5B DNA MER1_type 24 117 -61 8 1321 188 339 67 42 chrX 96545958 96546078 -70104218 - L4 LINE RTE -1616 413 291 8 1321 232 315 44 16 chrX 96546014 96546119 -70104177 + MIR SINE MIR 103 207 -61 9 1321 338 141 46 15 chrX 96546119 96546184 -70104112 - MTEb LTR MaLR -254 125 59 9 1321 475 112 22 0 chrX 96546756 96546845 -70103451 + (CA)n Simple_repeat Simple_repeat 2 92 0 9 1321 225 108 0 0 chrX 96546886 96546923 -70103373 + (TA)n Simple_repeat Simple_repeat 1 37 0 9 1321 233 208 12 61 chrX 96546931 96547013 -70103283 + (CA)n Simple_repeat Simple_repeat 2 79 0 9 1321 269 340 161 55 chrX 96547245 96547681 -70102615 - L2a LINE L2 -31 3395 2914 9 1321 255 335 139 30 chrX 96547955 96548295 -70102001 + L2b LINE L2 2802 3174 -201 9 1321 248 254 81 0 chrX 96548549 96548630 -70101666 - MIRm SINE MIR -113 155 56 9 1321 1648 226 30 14 chrX 96548701 96549068 -70101228 - MTEa LTR MaLR -4 375 3 9 1321 441 0 0 0 chrX 96549445 96549494 -70100802 + (TC)n Simple_repeat Simple_repeat 1 49 0 9 1321 225 279 49 0 chrX 96549890 96549951 -70100345 - MLT1A0 LTR MaLR -281 84 21 1 1321 187 342 156 25 chrX 96550239 96550482 -70099814 - L2a LINE L2 -618 2801 2527 9 1321 180 342 134 37 chrX 96550873 96551037 -70099259 - L2c LINE L2 -233 3154 2975 1 1321 735 199 142 14 chrX 96551462 96551681 -70098615 + L1MC4a LINE L1 6756 7002 -880 1 1321 495 0 0 0 chrX 96551709 96551764 -70098532 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 1321 336 48 0 0 chrX 96551764 96551805 -70098491 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1321 454 248 69 52 chrX 96551805 96551979 -70098317 - L1MC3 LINE L1 -54 7731 7555 1 1321 486 266 201 25 chrX 96552056 96552414 -70097882 - L1MC3 LINE L1 -201 7584 7164 1 1321 242 169 102 0 chrX 96552492 96552551 -70097745 + L1MC4a LINE L1 7004 7068 -717 1 1321 278 263 13 38 chrX 96552587 96552666 -70097630 + PB1D10 SINE Alu 15 91 -26 1 1321 291 310 97 2 chrX 96552716 96552907 -70097389 + L1MC4a LINE L1 7200 7539 -456 1 1321 660 195 62 45 chrX 96553031 96553208 -70097088 + L1MC4a LINE L1 7703 7882 0 1 1321 603 0 0 0 chrX 96555115 96555182 -70095114 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 1321 251 330 90 29 chrX 96555410 96555631 -70094665 - MIRb SINE MIR -8 260 22 1 1321 524 331 52 26 chrX 96556276 96556468 -70093828 - MLT1A1 LTR MaLR -8 400 204 1 1321 192 63 61 45 chrX 96556479 96556545 -70093751 + T-rich Low_complexity Low_complexity 4 70 0 1 1321 227 321 17 68 chrX 96556624 96556741 -70093555 - MLT1A1 LTR MaLR -254 154 44 1 1321 1096 201 176 21 chrX 96556776 96557099 -70093197 + MTD LTR MaLR 22 419 0 1 1321 196 379 20 31 chrX 96557545 96557643 -70092653 - MIR3 SINE MIR -13 195 99 1 1321 206 321 128 0 chrX 96558385 96558494 -70091802 - MIRm SINE MIR -130 146 24 1 1321 236 295 38 25 chrX 96559257 96559337 -70090959 + MIR SINE MIR 42 122 -86 1 1321 372 264 57 106 chrX 96559937 96560060 -70090236 - PB1D10 SINE Alu 0 117 1 1 1321 454 223 9 37 chrX 96560107 96560214 -70090082 + ID_B1 SINE B4 117 220 -4 1 1321 566 222 81 7 chrX 96560214 96560350 -70089946 + B1_Mur1 SINE Alu 1 146 -3 1 1321 225 349 48 84 chrX 96560350 96560408 -70089888 + B4A SINE B4 225 279 -13 1 1321 207 222 15 45 chrX 96560418 96560484 -70089812 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 1321 200 225 14 40 chrX 96561042 96561116 -70089180 + (CAGAGA)n Simple_repeat Simple_repeat 1 72 0 1 1321 226 239 67 124 chrX 96561375 96561480 -70088816 + RMER13B LTR ERVK 201 299 -609 1 1321 2625 119 65 10 chrX 96561713 96562112 -70088184 - MTC LTR MaLR 0 421 1 1 1321 255 103 0 0 chrX 96562779 96562818 -70087478 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1321 382 290 23 39 chrX 96563702 96563831 -70086465 + MIRb SINE MIR 42 168 -100 1 1321 930 259 18 22 chrX 96563902 96564127 -70086169 + ID_B1 SINE B4 1 224 0 1 1321 750 190 65 7 chrX 96564137 96564275 -70086021 + B1_Mus1 SINE Alu 1 146 -2 1 1321 443 187 0 9 chrX 96564282 96564395 -70085901 + GA-rich Low_complexity Low_complexity 3 114 0 1 1321 299 313 0 0 chrX 96565378 96565461 -70084835 - ID4_ SINE ID 0 83 1 1 1321 880 295 4 8 chrX 96565498 96565744 -70084552 - MIR SINE MIR 0 262 18 1 1321 303 361 24 24 chrX 96565767 96565892 -70084404 - L1ME3B LINE L1 -7 6233 6109 1 1321 410 187 0 11 chrX 96567010 96567102 -70083194 + CT-rich Low_complexity Low_complexity 3 93 0 1 1321 1032 153 0 0 chrX 96567108 96567258 -70083038 - B1_Mur4 SINE Alu 0 150 1 1 1321 811 270 42 5 chrX 96567281 96567497 -70082799 - ID_B1 SINE B4 0 224 1 1 1321 190 200 0 0 chrX 96567964 96567999 -70082297 + MIRb SINE MIR 203 237 -31 1 1321 302 346 45 60 chrX 96568013 96568213 -70082083 + MIR SINE MIR 21 217 -45 1 1321 259 45 44 22 chrX 96568364 96568409 -70081887 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 1 1321 218 308 55 46 chrX 96569197 96569306 -70080990 - L2a LINE L2 -19 3407 3298 1 1321 2809 304 100 61 chrX 96570258 96570939 -70079357 - Lx8 LINE L1 0 7473 6724 1 1321 1174 63 0 7 chrX 96570939 96571083 -70079213 + B1_Mus1 SINE Alu 1 143 -5 1 1321 2809 304 100 61 chrX 96571083 96571732 -70078564 - Lx8 LINE L1 -750 6723 6115 1 1321 711 90 0 0 chrX 96571732 96571832 -70078464 + (TCCC)n Simple_repeat Simple_repeat 2 101 0 1 1321 3250 234 58 31 chrX 96571832 96572864 -70077432 - Lx8 LINE L1 -1359 6114 4981 1 1321 183 80 0 0 chrX 96572890 96572915 -70077381 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 1321 7670 248 61 72 chrX 96572929 96576452 -70073844 - Lx8 LINE L1 -1453 4394 915 1 1321 373 368 39 39 chrX 96576970 96577202 -70073094 - MIR SINE MIR -10 252 21 1 1321 534 292 101 98 chrX 96577407 96577764 -70072532 - ORR1D2 LTR MaLR 0 370 13 1 1321 252 325 12 36 chrX 96579471 96579554 -70070742 - MIR3 SINE MIR -22 186 106 1 1321 198 0 0 0 chrX 96579781 96579803 -70070493 + (CAA)n Simple_repeat Simple_repeat 3 24 0 1 1321 189 214 0 0 chrX 96580040 96580082 -70070214 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1321 230 140 40 0 chrX 96580190 96580240 -70070056 + T-rich Low_complexity Low_complexity 1 52 0 1 1321 358 264 8 0 chrX 96580239 96580360 -70069936 + GA-rich Low_complexity Low_complexity 1 122 0 1 1321 372 104 0 0 chrX 96580375 96580442 -70069854 + (GA)n Simple_repeat Simple_repeat 2 68 0 1 1321 309 325 52 37 chrX 96580442 96580576 -70069720 - B1F SINE Alu -12 137 2 1 1321 187 348 14 0 chrX 96580987 96581056 -70069240 - MIRm SINE MIR -114 162 93 1 1321 471 279 58 28 chrX 96581376 96581570 -70068726 + MIR SINE MIR 45 234 -34 1 1321 259 235 176 0 chrX 96581771 96581839 -70068457 + MADE2 DNA Mariner 1 80 0 1 1321 802 172 20 27 chrX 96582399 96582548 -70067748 - B1_Mus1 SINE Alu 0 148 1 1 1321 666 118 0 0 chrX 96582635 96582737 -70067559 + (TTCC)n Simple_repeat Simple_repeat 3 104 0 1 1321 324 275 25 0 chrX 96582744 96582824 -70067472 - ID4 SINE ID 0 83 2 1 1321 225 239 0 0 chrX 96582855 96582901 -70067395 - PB1 SINE Alu -1 126 81 1 1321 247 344 16 47 chrX 96582981 96583109 -70067187 + L2a LINE L2 3298 3421 -5 1 1321 186 312 57 86 chrX 96583554 96583659 -70066637 + MIR3 SINE MIR 101 202 -6 1 1321 470 203 457 11 chrX 96583675 96583768 -70066528 - B3 SINE B2 -5 211 81 1 1321 486 0 0 0 chrX 96583768 96583822 -70066474 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1321 470 223 117 0 chrX 96583822 96583889 -70066407 - B3 SINE B2 -136 80 2 1 1321 250 323 47 66 chrX 96584706 96584812 -70065484 + MIR3 SINE MIR 60 163 -45 1 1321 327 164 0 0 chrX 96585529 96585590 -70064706 + CT-rich Low_complexity Low_complexity 2 62 0 1 1321 248 208 0 0 chrX 96585621 96585669 -70064627 + (CCCCAG)n Simple_repeat Simple_repeat 3 50 0 1 1321 524 15 15 0 chrX 96586895 96586960 -70063336 + (TC)n Simple_repeat Simple_repeat 2 67 0 1 1321 249 307 81 27 chrX 96587506 96587648 -70062648 + MIR SINE MIR 44 198 -70 1 1321 672 13 0 0 chrX 96588450 96588527 -70061769 + (CA)n Simple_repeat Simple_repeat 1 77 0 1 1321 248 269 92 0 chrX 96589227 96589301 -70060995 - PB1D7 SINE Alu -27 93 14 1 1321 740 63 68 11 chrX 96589342 96589518 -70060778 - RMER17A LTR ERVK -297 454 269 1 1321 2832 215 111 62 chrX 96589519 96590363 -70059933 - RMER19B LTR ERVK -16 886 1 1 1321 397 312 0 0 chrX 96592106 96592215 -70058081 + PB1D10 SINE Alu 1 109 -8 1 1321 182 256 0 0 chrX 96592366 96592405 -70057891 + MIRc SINE MIR 206 244 -24 1 1321 459 0 0 0 chrX 96593151 96593202 -70057094 + (CTAAA)n Simple_repeat Simple_repeat 1 51 0 1 1321 477 127 0 0 chrX 96593575 96593654 -70056642 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 1321 1076 192 49 6 chrX 96593660 96593843 -70056453 - B3 SINE B2 -25 191 1 1 1321 242 298 94 36 chrX 96593867 96594009 -70056287 - MIR SINE MIR -111 151 3 1 1321 180 226 0 0 chrX 96594341 96594372 -70055924 - L2a LINE L2 -23 3403 3373 1 1321 223 174 0 0 chrX 96595092 96595138 -70055158 + (ATG)n Simple_repeat Simple_repeat 1 46 0 1 1321 912 222 17 0 chrX 96595224 96595400 -70054896 + B3 SINE B2 2 180 -36 1 1321 320 307 18 0 chrX 96595560 96595674 -70054622 - PB1D10 SINE Alu -1 116 1 1 1321 1105 204 73 0 chrX 96595744 96595935 -70054361 + B3 SINE B2 2 206 -10 1 1321 340 269 0 25 chrX 96595960 96596040 -70054256 + B1F SINE Alu 67 144 -5 1 1321 213 322 183 0 chrX 96596070 96596185 -70054111 - L2 LINE L2 -607 2812 2677 1 1321 931 135 25 36 chrX 96596405 96596608 -70053688 + B3 SINE B2 1 194 -1 1 1321 303 317 120 42 chrX 96596608 96596799 -70053497 - L2 LINE L2 -1065 2354 2149 1 1321 195 42 0 0 chrX 96596881 96596905 -70053391 + (TTTG)n Simple_repeat Simple_repeat 4 27 0 1 1321 532 224 0 70 chrX 96596918 96597033 -70053263 - B1_Mur1 SINE Alu -42 107 1 1 1321 492 369 113 49 chrX 96597155 96597767 -70052529 - L2 LINE L2 -2320 1099 440 1 1321 1309 177 0 5 chrX 96597767 96597983 -70052313 + B3 SINE B2 2 216 0 1 1321 492 369 113 49 chrX 96597983 96598107 -70052189 - L2 LINE L2 -2980 439 316 1 1321 267 152 0 0 chrX 96598125 96598171 -70052125 + GA-rich Low_complexity Low_complexity 1 46 0 1 1321 522 0 0 0 chrX 96599069 96599127 -70051169 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 165 557 311 25 20 chrX 96600013 96600216 -70050080 - MIR SINE MIR -1 261 58 1 1322 2549 197 8 12 chrX 96600586 96601080 -70049216 + ORSL-2b DNA Tip100 1 492 -16 1 1322 238 60 42 69 chrX 96601227 96601299 -70048997 + A-rich Low_complexity Low_complexity 2 71 0 1 1322 339 310 44 0 chrX 96601299 96601412 -70048884 + L4 LINE RTE 1475 1592 -437 1 1322 435 368 23 0 chrX 96601466 96601640 -70048656 + L4 LINE RTE 1583 1760 -269 1 1322 180 286 16 16 chrX 96601830 96601894 -70048402 + MIRb SINE MIR 169 232 -36 1 1322 214 342 104 47 chrX 96602660 96602761 -70047535 + MIRc SINE MIR 30 137 -131 1 1322 198 0 0 0 chrX 96602761 96602783 -70047513 + (GTTTG)n Simple_repeat Simple_repeat 3 24 0 1 1322 214 342 104 47 chrX 96602783 96602874 -70047422 + MIRc SINE MIR 138 233 -35 1 1322 447 269 76 15 chrX 96603276 96603408 -70046888 + B1_Mur1 SINE Alu 2 141 -8 1 1322 399 309 68 68 chrX 96603465 96603642 -70046654 - MIRb SINE MIR -47 221 45 1 1322 207 0 0 0 chrX 96604583 96604606 -70045690 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 1 1322 251 341 22 11 chrX 96604997 96605086 -70045210 - MIR SINE MIR -86 122 33 1 1322 413 122 0 13 chrX 96605561 96605636 -70044660 + (TG)n Simple_repeat Simple_repeat 2 75 0 2 1322 505 291 123 42 chrX 96605936 96606220 -70044076 + L2b LINE L2 2078 2384 -1035 2 1322 208 314 168 8 chrX 96606782 96606901 -70043395 + L2b LINE L2 3233 3370 -5 2 1322 737 246 109 0 chrX 96606976 96607151 -70043145 + B3 SINE B2 1 194 -22 2 1322 33 0 0 0 chrX 96607169 96607202 -70043094 + AT_rich Low_complexity Low_complexity 1 33 0 2 1322 333 310 88 9 chrX 96607280 96607394 -70042902 + B1_Mur3 SINE Alu 27 149 0 2 1322 394 316 30 15 chrX 96607483 96607618 -70042678 - MIR SINE MIR -124 138 2 2 1322 717 272 85 78 chrX 96607639 96607934 -70042362 + MER2 DNA MER2_type 35 331 -14 2 1322 307 276 76 38 chrX 96608106 96608155 -70042141 - B1_Mm SINE Alu -10 137 6 2 1322 386 269 0 0 chrX 96608155 96608233 -70042063 - ID_B1 SINE B4 -60 164 87 2 1322 206 310 32 72 chrX 96609517 96609642 -70040654 - L3 LINE CR1 -39 4450 4331 2 1322 553 259 9 0 chrX 96609804 96609920 -70040376 - PB1D10 SINE Alu 0 117 1 2 1322 452 62 0 15 chrX 96610148 96610213 -70040083 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 1322 358 290 19 39 chrX 96610214 96610318 -70039978 - RSINE1 SINE B4 -62 103 2 2 1322 310 159 0 113 chrX 96610325 96610337 -70039959 - ID_B1 SINE B4 -2 222 160 2 1322 369 169 0 0 chrX 96610337 96610396 -70039900 - B1F SINE Alu -9 140 82 2 1322 200 61 0 57 chrX 96610474 96610509 -70039787 + (CCCCCA)n Simple_repeat Simple_repeat 2 34 0 2 1322 461 230 0 0 chrX 96610511 96610598 -70039698 - PB1D10 SINE Alu -5 112 26 2 1322 1181 112 0 6 chrX 96612099 96612443 -70037853 + (TTCC)n Simple_repeat Simple_repeat 1 342 0 2 1322 254 245 0 0 chrX 96612788 96612841 -70037455 + GA-rich Low_complexity Low_complexity 1 53 0 2 1322 244 291 12 48 chrX 96613070 96613153 -70037143 - MIR3 SINE MIR -25 183 104 2 1322 206 121 30 0 chrX 96613436 96613469 -70036827 + G-rich Low_complexity Low_complexity 6 39 0 2 1322 348 111 0 0 chrX 96614821 96614875 -70035421 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1322 265 111 36 18 chrX 96614965 96615020 -70035276 + T-rich Low_complexity Low_complexity 2 57 0 2 1322 219 389 39 8 chrX 96615024 96615151 -70035145 - ID_B1 SINE B4 0 224 94 2 1322 331 300 50 0 chrX 96615054 96615154 -70035142 - PB1D7 SINE Alu -9 111 7 2 1322 264 254 32 0 chrX 96615443 96615506 -70034790 + GA-rich Low_complexity Low_complexity 1 65 0 2 1322 195 42 0 0 chrX 96616002 96616026 -70034270 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 1322 284 227 124 0 chrX 96616098 96616195 -70034101 + PB1D10 SINE Alu 1 109 -8 2 1322 261 312 21 21 chrX 96616260 96616355 -70033941 + B1_Mm SINE Alu 2 96 -51 2 1322 360 177 76 0 chrX 96616615 96616715 -70033581 + B1F1 SINE Alu 28 145 -5 2 1322 1121 76 133 0 chrX 96616742 96616900 -70033396 - B2_Mm2 SINE B2 -16 179 1 2 1322 968 345 84 33 chrX 96616974 96617582 -70032714 + L3 LINE CR1 3339 3977 -512 2 1322 269 305 24 12 chrX 96617863 96617946 -70032350 - MIRb SINE MIR -156 112 29 2 1322 199 409 8 8 chrX 96617942 96618070 -70032226 + L3 LINE CR1 4155 4282 -207 2 1322 465 19 0 0 chrX 96618610 96618664 -70031632 + (TC)n Simple_repeat Simple_repeat 1 54 0 2 1322 204 132 0 26 chrX 96618664 96618703 -70031593 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1322 276 77 0 0 chrX 96619283 96619322 -70030974 + (CAT)n Simple_repeat Simple_repeat 2 40 0 2 1322 1048 50 0 7 chrX 96619365 96619505 -70030791 + B1_Mm SINE Alu 3 141 -6 2 1322 216 0 0 0 chrX 96619508 96619532 -70030764 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1322 730 191 63 0 chrX 96619532 96619658 -70030638 - B1_Mus2 SINE Alu -13 134 1 2 1322 229 269 215 0 chrX 96619675 96619768 -70030528 - PB1D7 SINE Alu -5 115 3 2 1322 398 69 17 0 chrX 96619807 96619865 -70030431 + (CACCC)n Simple_repeat Simple_repeat 3 61 0 2 1322 201 349 30 0 chrX 96621079 96621145 -70029151 + L3b LINE CR1 167 234 -248 2 1322 258 213 15 62 chrX 96621542 96621607 -70028689 - MIRc SINE MIR -120 148 87 2 1322 243 253 112 22 chrX 96622858 96622947 -70027349 - MIR SINE MIR -71 137 41 2 1322 287 369 47 0 chrX 96623170 96623319 -70026977 - MIRc SINE MIR -70 198 43 2 1322 239 212 44 29 chrX 96623744 96623812 -70026484 + RLTR22_Mus LTR ERVK 1269 1337 -471 2 1322 240 205 23 93 chrX 96624795 96624881 -70025415 + MIRc SINE MIR 63 142 -126 2 1322 315 0 0 0 chrX 96625390 96625425 -70024871 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 2 1322 200 34 0 33 chrX 96625856 96625886 -70024410 + (CAGG)n Simple_repeat Simple_repeat 3 31 0 2 1322 396 0 0 0 chrX 96626742 96626786 -70023510 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1322 498 290 147 5 chrX 96628698 96628916 -70021380 - MIR SINE MIR -13 249 1 2 1322 21 0 0 0 chrX 96629306 96629327 -70020969 + GC_rich Low_complexity Low_complexity 1 21 0 2 1322 227 349 32 4 chrX 96629840 96629966 -70020330 + MIR SINE MIR 39 170 -98 2 1322 247 326 123 8 chrX 96630637 96630767 -70019529 + MIRm SINE MIR 39 183 -93 2 1322 468 0 0 0 chrX 96631143 96631195 -70019101 + (TC)n Simple_repeat Simple_repeat 2 53 0 2 1322 263 333 37 7 chrX 96631942 96632081 -70018215 - MIRb SINE MIR -2 266 116 2 1322 258 105 0 0 chrX 96632188 96632226 -70018070 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1322 1052 83 4 13 chrX 96634740 96634972 -70015324 + (GAA)n Simple_repeat Simple_repeat 1 230 0 2 1322 577 264 99 20 chrX 96635106 96635257 -70015039 + RSINE1 SINE B4 3 165 0 2 1322 770 238 48 0 chrX 96635469 96635637 -70014659 + B3A SINE B2 5 180 -18 2 1322 1323 77 11 27 chrX 96635688 96635875 -70014421 + B2_Mm1t SINE B2 2 185 -8 2 1322 293 250 59 0 chrX 96636080 96636148 -70014148 + tRNA-Ala-GCY_ tRNA tRNA 2 73 -2 2 1322 290 333 122 39 chrX 96637125 96637306 -70012990 + MIR SINE MIR 65 260 -2 2 1322 227 311 14 0 chrX 96637485 96637559 -70012737 + MIRb SINE MIR 64 138 -130 2 1322 189 94 0 0 chrX 96638538 96638570 -70011726 + (C)n Simple_repeat Simple_repeat 1 32 0 2 1322 230 230 144 39 chrX 96639317 96639421 -70010875 + MIRc SINE MIR 12 126 -142 2 1322 312 233 21 32 chrX 96640313 96640406 -70009890 - MIR3 SINE MIR -18 190 99 2 1322 909 138 79 0 chrX 96641032 96641184 -70009112 + B2_Mm1t SINE B2 2 165 -28 2 1322 441 0 0 0 chrX 96641189 96641238 -70009058 + (GA)n Simple_repeat Simple_repeat 1 49 0 2 1322 222 304 12 25 chrX 96641319 96641400 -70008896 + RSINE1 SINE B4 2 81 -84 2 1322 285 29 0 0 chrX 96641694 96641728 -70008568 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 2 1322 207 0 0 0 chrX 96642043 96642066 -70008230 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1322 835 130 7 7 chrX 96642822 96642969 -70007327 + (TTCC)n Simple_repeat Simple_repeat 2 148 0 2 1322 471 267 0 57 chrX 96642969 96643092 -70007204 - PB1D10 SINE Alu -1 116 1 2 1322 1188 222 9 0 chrX 96643125 96643337 -70006959 - ID_B1 SINE B4 -8 216 3 2 1322 305 317 59 10 chrX 96643347 96643449 -70006847 - PB1D10 SINE Alu -8 109 3 2 1322 590 39 0 0 chrX 96643687 96643765 -70006531 + B1_Mus2 SINE Alu 70 147 0 2 1322 22 0 0 0 chrX 96644636 96644658 -70005638 + GC_rich Low_complexity Low_complexity 1 22 0 2 1322 506 16 16 0 chrX 96645215 96645278 -70005018 + (TC)n Simple_repeat Simple_repeat 1 64 0 2 1322 246 32 0 0 chrX 96645630 96645661 -70004635 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1322 546 29 0 0 chrX 96645661 96645728 -70004568 + (GA)n Simple_repeat Simple_repeat 2 69 0 2 1322 254 319 43 22 chrX 96645818 96645956 -70004340 + B1F1 SINE Alu 1 141 -8 2 1322 357 258 0 0 chrX 96645983 96646049 -70004247 + ID4_ SINE ID 5 70 -13 2 1322 246 62 0 0 chrX 96646056 96646088 -70004208 + (CAAAT)n Simple_repeat Simple_repeat 4 35 0 2 1322 232 27 54 0 chrX 96646221 96646258 -70004038 + (TC)n Simple_repeat Simple_repeat 1 39 0 2 1322 180 0 0 0 chrX 96646258 96646278 -70004018 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 1322 245 259 0 0 chrX 96646278 96646336 -70003960 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1322 312 282 29 93 chrX 96647549 96647721 -70002575 + RMER10A LTR ERVL 257 417 -25 2 1322 182 279 0 0 chrX 96647884 96647927 -70002369 + MIR SINE MIR 34 76 -132 2 1322 424 318 103 48 chrX 96648562 96648769 -70001527 - B4A SINE B4 -6 286 62 2 1322 351 0 0 0 chrX 96648769 96648808 -70001488 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 1322 424 318 103 48 chrX 96648808 96648871 -70001425 - B4A SINE B4 -231 61 1 2 1322 230 292 75 98 chrX 96649091 96649224 -70001072 + YREP_Mm Unknown Unknown 182 311 -1501 2 1322 405 252 47 0 chrX 96649371 96649478 -70000818 + PB1D10 SINE Alu 1 112 -5 2 1322 333 0 0 0 chrX 96649831 96649868 -70000428 + (TC)n Simple_repeat Simple_repeat 2 38 0 2 1322 333 0 0 0 chrX 96649868 96649904 -70000392 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1322 542 263 66 0 chrX 96649919 96650056 -70000240 - B3 SINE B2 -30 186 41 2 1322 418 261 65 16 chrX 96650107 96650272 -70000024 - MIR SINE MIR -61 207 35 2 1322 283 264 128 0 chrX 96650309 96650434 -69999862 - MIR SINE MIR 0 262 122 2 1322 252 307 264 16 chrX 96650745 96650942 -69999354 + MIRc SINE MIR 2 247 -21 2 1322 434 65 0 16 chrX 96652375 96652438 -69997858 + (TCCC)n Simple_repeat Simple_repeat 4 65 0 2 1322 261 347 29 39 chrX 96652578 96652680 -69997616 - B1F2 SINE Alu -48 101 1 3 1322 203 287 33 100 chrX 96652700 96652820 -69997476 + MIR SINE MIR 37 148 -114 3 1322 298 162 80 13 chrX 96653066 96653141 -69997155 + MIRc SINE MIR 54 133 -135 3 1322 345 235 38 50 chrX 96653242 96653371 -69996925 - MIRc SINE MIR -98 170 41 3 1322 219 239 0 0 chrX 96653750 96653796 -69996500 - MIRc SINE MIR -106 162 117 3 1322 319 38 19 37 chrX 96653831 96653885 -69996411 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 3 1322 185 0 40 0 chrX 96655077 96655102 -69995194 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1322 717 191 7 33 chrX 96655653 96655805 -69994491 + B1_Mur1 SINE Alu 1 148 -1 3 1322 388 280 89 51 chrX 96656003 96656161 -69994135 + RSINE1 SINE B4 2 165 0 3 1322 202 289 0 19 chrX 96656204 96656257 -69994039 + GA-rich Low_complexity Low_complexity 4 55 0 3 1322 425 342 84 19 chrX 96656411 96656721 -69993575 - L1MC4a LINE L1 -1989 5893 5564 3 1322 489 279 0 0 chrX 96657058 96657169 -69993127 + PB1D7 SINE Alu 1 111 -9 3 1322 228 290 8 116 chrX 96657064 96657185 -69993111 + MT2B2 LTR ERVL 171 278 -306 3 1322 262 247 128 11 chrX 96658362 96658456 -69991840 + RSINE1 SINE B4 61 165 0 3 1322 268 339 30 45 chrX 96658641 96658774 -69991522 + ERVL-E-int LTR ERVL 4536 4666 -1001 3 1322 459 271 99 15 chrX 96658843 96658880 -69991416 + B1F1 SINE Alu 2 47 -102 3 1322 270 0 0 0 chrX 96658880 96658910 -69991386 + (CTGGGG)n Simple_repeat Simple_repeat 6 35 0 3 1322 459 271 99 15 chrX 96658910 96659003 -69991293 + B1F1 SINE Alu 48 143 -6 3 1322 978 223 14 32 chrX 96660049 96660267 -69990029 - B3 SINE B2 -2 214 1 3 1322 216 97 0 0 chrX 96660804 96660835 -69989461 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1322 30 0 0 0 chrX 96661076 96661106 -69989190 + AT_rich Low_complexity Low_complexity 1 30 0 3 1322 650 172 0 43 chrX 96664806 96664994 -69985302 + GA-rich Low_complexity Low_complexity 1 180 0 3 1322 555 16 0 0 chrX 96665269 96665333 -69984963 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 1322 303 297 0 0 chrX 96665333 96665407 -69984889 + (CG)n Simple_repeat Simple_repeat 1 74 0 3 1322 387 0 0 0 chrX 96666215 96666258 -69984038 + (A)n Simple_repeat Simple_repeat 1 43 0 3 1322 216 0 0 0 chrX 96666316 96666340 -69983956 + (TTG)n Simple_repeat Simple_repeat 2 25 0 3 1322 286 197 29 57 chrX 96666622 96666642 -69983654 + ID_B1 SINE B4 71 135 -86 3 1322 321 85 0 0 chrX 96666642 96666689 -69983607 + PB1D9 SINE Alu 8 54 -66 3 1322 564 135 18 46 chrX 96666768 96666864 -69983432 + B1_Mus2 SINE Alu 42 139 -8 3 1322 297 0 0 0 chrX 96666864 96666897 -69983399 + (CAAT)n Simple_repeat Simple_repeat 2 34 0 3 1322 564 135 18 46 chrX 96666897 96666909 -69983387 + B1_Mus2 SINE Alu 140 147 0 3 1322 242 264 0 122 chrX 96667144 96667170 -69983126 + B4 SINE B4 73 144 -148 3 1322 246 192 0 71 chrX 96667170 96667226 -69983070 + B1_Mus2 SINE Alu 8 59 -88 3 1322 344 252 9 46 chrX 96667226 96667334 -69982962 + (CAGAGA)n Simple_repeat Simple_repeat 3 106 0 3 1322 220 104 82 20 chrX 96667344 96667393 -69982903 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 3 1322 451 162 0 36 chrX 96667393 96667476 -69982820 + B1_Mur2 SINE Alu 70 149 0 3 1322 241 274 69 35 chrX 96667539 96667626 -69982670 - B1F SINE Alu -4 145 56 3 1322 304 324 145 0 chrX 96668288 96668433 -69981863 - L1M5 LINE L1 -428 5812 5647 3 1322 694 172 17 8 chrX 96668694 96668811 -69981485 + PB1D9 SINE Alu 3 120 0 3 1322 630 315 47 97 chrX 96668815 96669160 -69981136 - MLT1F2 LTR MaLR 0 560 231 3 1322 249 33 0 0 chrX 96669160 96669190 -69981106 + (TGG)n Simple_repeat Simple_repeat 3 32 0 3 1322 630 315 47 97 chrX 96669190 96669248 -69981048 - MLT1F2 LTR MaLR -330 230 177 3 1322 378 294 33 25 chrX 96669259 96669381 -69980915 - MLT1F2 LTR MaLR -340 220 98 3 1322 4062 194 62 18 chrX 96669382 96669831 -69980465 - L1MCa LINE L1 -2741 3580 3096 3 1322 346 153 107 40 chrX 96669831 96669906 -69980390 - ID2 SINE ID -3 80 1 3 1322 4062 194 62 18 chrX 96669906 96670543 -69979753 - L1MCa LINE L1 -3226 3095 2447 3 1322 505 330 116 0 chrX 96670550 96670569 -69979727 - B3A SINE B2 -5 193 175 3 1322 195 42 0 0 chrX 96670569 96670593 -69979703 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1322 505 330 116 0 chrX 96670593 96670746 -69979550 - B3A SINE B2 -24 174 2 3 1322 198 0 0 0 chrX 96670828 96670850 -69979446 + (TTGG)n Simple_repeat Simple_repeat 3 24 0 3 1322 304 320 13 0 chrX 96670851 96670926 -69979370 - ID4_ SINE ID -5 78 3 3 1322 371 246 67 37 chrX 96670927 96671062 -69979234 - L1MCa LINE L1 -4116 2392 2254 3 1322 434 235 67 19 chrX 96671098 96671202 -69979094 - PB1D10 SINE Alu 0 117 9 3 1322 318 314 9 9 chrX 96671114 96671220 -69979076 - ID_B1 SINE B4 -49 175 70 3 1322 417 356 174 0 chrX 96671231 96671478 -69978818 - L1MCa LINE L1 -4256 2252 1963 3 1322 465 231 45 17 chrX 96671489 96671665 -69978631 - L1MCa LINE L1 -4615 1893 1713 3 1322 464 298 30 30 chrX 96671666 96671801 -69978495 - MLT1F2 LTR MaLR -393 167 33 3 1322 328 301 135 19 chrX 96671985 96672141 -69978155 - L1M5 LINE L1 -756 5390 5217 3 1322 433 154 0 0 chrX 96672723 96672788 -69977508 - B3A SINE B2 -133 65 1 3 1322 878 235 84 32 chrX 96672793 96673044 -69977252 + MER2 DNA MER2_type 59 322 -23 3 1322 246 235 14 14 chrX 96674333 96674402 -69975894 + CT-rich Low_complexity Low_complexity 3 71 0 3 1322 255 315 144 8 chrX 96674647 96674808 -69975488 - MIRb SINE MIR -53 215 30 3 1322 240 130 0 0 chrX 96675230 96675276 -69975020 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1322 294 339 43 81 chrX 96675665 96675700 -69974596 + ID_B1 SINE B4 45 151 -73 3 1322 367 322 0 92 chrX 96675700 96675830 -69974466 + B1F SINE Alu 1 118 -31 3 1322 294 339 43 81 chrX 96675830 96675851 -69974445 + ID_B1 SINE B4 152 223 -1 3 1322 183 363 31 46 chrX 96675868 96675998 -69974298 + MIR3 SINE MIR 78 205 -3 3 1322 319 255 0 0 chrX 96676372 96676452 -69973844 - ID4_ SINE ID -58 94 15 3 1322 217 234 73 59 chrX 96676394 96676462 -69973834 - B2_Mm2 SINE B2 -122 73 5 3 1322 228 130 0 53 chrX 96676497 96676554 -69973742 - FAM SINE Alu 0 315 262 3 1322 467 237 0 97 chrX 96676505 96676650 -69973646 - ID_B1 SINE B4 0 224 94 3 1322 223 301 60 12 chrX 96676786 96676870 -69973426 + L2b LINE L2 3238 3325 -50 3 1322 231 221 93 0 chrX 96677132 96677218 -69973078 + L1MD2 LINE L1 370 463 -6084 3 1322 312 281 148 27 chrX 96677219 96677402 -69972894 + L2c LINE L2 3182 3386 -1 3 1322 490 222 9 61 chrX 96678354 96678469 -69971827 + PB1D10 SINE Alu 4 112 -5 3 1322 508 292 66 0 chrX 96679176 96679313 -69970983 + RSINE1 SINE B4 3 148 -17 3 1322 334 248 267 25 chrX 96679378 96679498 -69970798 + B1F1 SINE Alu 1 149 0 3 1322 343 296 87 0 chrX 96679516 96679631 -69970665 + PB1 SINE Alu 1 125 -2 3 1322 231 208 0 0 chrX 96679643 96679690 -69970606 + ID4 SINE ID 3 49 -34 3 1322 334 331 119 16 chrX 96679874 96680067 -69970229 + L1M5 LINE L1 5518 5730 -394 3 1322 334 327 27 9 chrX 96680730 96680841 -69969455 - MER20 DNA MER1_type -95 124 12 3 1322 315 257 125 88 chrX 96680907 96681099 -69969197 + MIRm SINE MIR 31 229 -47 3 1322 514 194 0 0 chrX 96681363 96681456 -69968840 + B1_Mur1 SINE Alu 50 142 -7 3 1322 260 284 40 13 chrX 96681485 96681560 -69968736 + ID4 SINE ID 4 80 -3 3 1322 302 278 125 85 chrX 96681762 96682010 -69968286 - L1MC4a LINE L1 -1918 5964 5707 3 1322 304 250 0 91 chrX 96682033 96682121 -69968175 - ID4_ SINE ID -1 82 3 3 1322 251 262 60 127 chrX 96682203 96682246 -69968050 - YREP_Mm Unknown Unknown -1435 377 227 3 1322 410 304 25 34 chrX 96682246 96682279 -69968017 + ID SINE ID 55 86 -138 3 1322 505 277 26 35 chrX 96682279 96682395 -69967901 + PB1D10 SINE Alu 3 117 0 3 1322 248 261 88 35 chrX 96684418 96684589 -69965707 - L2a LINE L2 -146 3280 3101 3 1322 206 108 62 0 chrX 96684726 96684791 -69965505 + A-rich Low_complexity Low_complexity 3 71 0 3 1322 398 273 91 75 chrX 96684979 96685014 -69965282 - B2_Mm2 SINE B2 -4 191 161 3 1322 378 42 0 0 chrX 96685014 96685062 -69965234 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1322 398 273 91 75 chrX 96685062 96685212 -69965084 - B2_Mm2 SINE B2 -35 160 5 3 1322 369 212 0 66 chrX 96685218 96685309 -69964987 - MIR SINE MIR -101 161 77 3 1322 291 314 23 23 chrX 96685434 96685522 -69964774 + B4A SINE B4 58 145 -147 3 1322 330 282 49 4 chrX 96685466 96685573 -69964723 + B1F SINE Alu 5 115 -5 3 1322 267 322 141 0 chrX 96685651 96685772 -69964524 + L2a LINE L2 3287 3424 -2 3 1322 503 234 11 16 chrX 96686146 96686264 -69964032 + PB1D10 SINE Alu 6 127 0 3 1322 311 311 0 13 chrX 96687689 96687764 -69962532 - ID4_ SINE ID -9 74 1 3 1322 218 315 0 0 chrX 96687935 96687989 -69962307 - MIRm SINE MIR -159 117 64 3 1322 717 159 0 0 chrX 96688200 96688307 -69961989 + RLTR9B LTR ERVK 331 437 0 3 1322 226 362 43 14 chrX 96688464 96688604 -69961692 + MIRb SINE MIR 72 215 -53 3 1322 248 322 0 65 chrX 96688644 96688737 -69961559 - RCHARR1 DNA MER1_type 0 974 888 3 1322 273 357 0 0 chrX 96688738 96688822 -69961474 + MIRb SINE MIR 114 197 -71 3 1322 866 146 0 0 chrX 96688830 96688960 -69961336 + B1_Mur4 SINE Alu 1 130 -20 3 1322 552 140 0 0 chrX 96688966 96689059 -69961237 + (GGAA)n Simple_repeat Simple_repeat 3 95 0 3 1322 254 106 21 0 chrX 96691406 96691453 -69958843 + (TTCA)n Simple_repeat Simple_repeat 4 51 0 3 1322 233 286 43 0 chrX 96691845 96691915 -69958381 - ID SINE ID -150 74 2 3 1322 396 287 32 0 chrX 96691953 96692047 -69958249 - PB1D10 SINE Alu -4 113 17 3 1322 701 79 10 0 chrX 96692288 96692389 -69957907 + (TTTC)n Simple_repeat Simple_repeat 4 105 0 3 1322 261 0 0 0 chrX 96692389 96692417 -69957879 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 3 1322 725 261 18 48 chrX 96692417 96692582 -69957714 - B3 SINE B2 -43 173 14 4 1322 466 260 50 20 chrX 96694179 96694379 -69955917 - L1MDa LINE L1 -4614 2019 1817 4 1322 218 312 266 0 chrX 96694954 96695063 -69955233 + MIR SINE MIR 103 240 -22 4 1322 943 245 14 5 chrX 96695137 96695346 -69954950 + MER2 DNA MER2_type 134 344 -1 4 1322 379 328 172 0 chrX 96695390 96695576 -69954720 + MIR SINE MIR 2 219 -43 4 1322 201 39 0 0 chrX 96696323 96696349 -69953947 + (CTAA)n Simple_repeat Simple_repeat 3 28 0 4 1322 197 167 32 129 chrX 96696436 96696498 -69953798 + L2 LINE L2 2037 2092 -1327 4 1322 217 132 0 0 chrX 96697115 96697153 -69953143 + (T)n Simple_repeat Simple_repeat 1 38 0 4 1322 258 316 0 0 chrX 96697234 96697310 -69952986 + L3b LINE CR1 186 261 -221 4 1322 541 228 34 9 chrX 96697712 96697831 -69952465 + B1F2 SINE Alu 2 129 -18 4 1322 273 246 43 0 chrX 96697848 96697917 -69952379 + ID4_ SINE ID 12 83 0 4 1322 325 359 30 8 chrX 96697995 96698127 -69952169 - L2a LINE L2 -9 3417 3283 4 1322 324 351 102 57 chrX 96698349 96698684 -69951612 - L1ME3 LINE L1 -19 6143 5794 4 1322 622 283 71 43 chrX 96698881 96699162 -69951134 - B4 SINE B4 -2 290 2 4 1322 309 51 0 0 chrX 96700382 96700421 -69949875 + (AGCTG)n Simple_repeat Simple_repeat 3 41 0 4 1322 268 359 0 0 chrX 96700563 96700655 -69949641 - L2b LINE L2 -9 3366 3275 4 1322 451 250 127 30 chrX 96701473 96701638 -69948658 + MER2 DNA MER2_type 1 181 -164 4 1322 573 214 0 4 chrX 96701749 96701869 -69948427 + PB1D7 SINE Alu 1 120 0 4 1322 348 317 48 0 chrX 96701879 96701983 -69948313 + MER2 DNA MER2_type 190 298 -47 4 1322 243 0 0 0 chrX 96702157 96702184 -69948112 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1322 316 264 214 40 chrX 96702208 96702334 -69947962 - B1F SINE Alu 0 149 2 4 1322 516 250 65 45 chrX 96702380 96702535 -69947761 - RSINE1 SINE B4 -4 161 4 4 1322 320 314 0 44 chrX 96702556 96702646 -69947650 - B1F SINE Alu -36 113 28 4 1322 270 212 173 48 chrX 96702630 96702734 -69947562 - MER5A1 DNA MER1_type -43 123 7 4 1322 537 331 13 0 chrX 96702840 96702997 -69947299 - MIRb SINE MIR -90 178 20 4 1322 983 246 29 5 chrX 96703454 96703637 -69946659 + B3 SINE B2 3 188 -28 4 1322 261 0 0 0 chrX 96703637 96703666 -69946630 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1322 983 246 29 5 chrX 96703666 96703690 -69946606 + B3 SINE B2 189 214 -2 4 1322 1098 144 193 0 chrX 96703706 96703887 -69946409 + B3 SINE B2 1 216 0 4 1322 1065 239 5 9 chrX 96704380 96704591 -69945705 - B3 SINE B2 -5 211 2 4 1322 180 345 17 68 chrX 96704600 96704718 -69945578 - MIRm SINE MIR -127 149 38 4 1322 475 271 14 36 chrX 96705543 96705681 -69944615 + RSINE1 SINE B4 3 137 -28 4 1322 735 134 14 7 chrX 96705879 96706022 -69944274 + GA-rich Low_complexity Low_complexity 2 145 0 4 1322 320 328 40 8 chrX 96706471 96706597 -69943699 - MLT1D LTR MaLR -371 134 5 4 1322 405 303 96 105 chrX 96707123 96707466 -69942830 + MLT1D LTR MaLR 6 345 -160 4 1322 344 193 0 12 chrX 96708417 96708501 -69941795 - Lx4B LINE L1 -17 7041 6959 4 1322 318 250 0 45 chrX 96710103 96710191 -69940105 + MLT1D LTR MaLR 325 408 0 4 1322 354 307 123 7 chrX 96710309 96710463 -69939833 + MIRb SINE MIR 79 250 -18 4 1322 642 294 65 42 chrX 96710656 96711108 -69939188 - L2b LINE L2 -215 3160 2704 4 1322 263 305 38 30 chrX 96711233 96711365 -69938931 - MIRb SINE MIR -127 141 9 4 1322 253 313 32 47 chrX 96711876 96712040 -69938256 - MIRc SINE MIR -21 187 29 4 1322 289 301 109 19 chrX 96712995 96713151 -69937145 - MIR SINE MIR -2 260 91 4 1322 1277 174 9 27 chrX 96714190 96714414 -69935882 + URR1B DNA MER1_type 5 224 -1 4 1322 712 103 17 0 chrX 96714605 96714721 -69935575 + (GA)n Simple_repeat Simple_repeat 1 118 0 4 1322 319 323 28 103 chrX 96716206 96716351 -69933945 + MIR3 SINE MIR 4 137 -71 4 1322 339 267 13 0 chrX 96717326 96717401 -69932895 - ID4 SINE ID 0 83 8 4 1322 291 54 0 0 chrX 96718534 96718571 -69931725 + (CAGCT)n Simple_repeat Simple_repeat 4 40 0 4 1322 618 161 0 0 chrX 96719800 96719912 -69930384 + A-rich Low_complexity Low_complexity 1 112 0 4 1322 242 250 72 36 chrX 96719926 96720009 -69930287 - MIR3 SINE MIR -98 170 82 4 1322 517 274 24 60 chrX 96720055 96720222 -69930074 + RSINE1 SINE B4 3 163 -2 4 1322 590 285 14 14 chrX 96720366 96720505 -69929791 - B1F1 SINE Alu -9 140 2 4 1322 262 269 16 129 chrX 96720397 96720521 -69929775 - MT2B LTR ERVL -338 263 154 4 1322 223 116 0 44 chrX 96720672 96720717 -69929579 + (TGG)n Simple_repeat Simple_repeat 3 45 0 4 1322 426 307 71 28 chrX 96721107 96721248 -69929048 + B1F1 SINE Alu 2 148 -1 4 1322 281 245 100 39 chrX 96721427 96721536 -69928760 + MIR3 SINE MIR 40 162 -46 4 1322 423 257 40 34 chrX 96721611 96721788 -69928508 + L1M4 LINE L1 5264 5441 -733 4 1322 417 39 0 0 chrX 96721885 96721936 -69928360 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1322 387 0 0 0 chrX 96721936 96721978 -69928318 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 1322 321 282 24 102 chrX 96721989 96722155 -69928141 + L1M4 LINE L1 5427 5579 -601 4 1322 296 310 126 0 chrX 96722160 96722247 -69928049 + PB1D10 SINE Alu 8 105 -12 4 1322 514 210 6 164 chrX 96722259 96722424 -69927872 + B1F2 SINE Alu 11 149 0 4 1322 1136 189 25 0 chrX 96722438 96722639 -69927657 + B3 SINE B2 1 206 -10 4 1322 982 235 77 86 chrX 96722697 96723095 -69927201 - MTE2a LTR MaLR -14 405 1 4 1322 915 288 98 46 chrX 96723095 96723558 -69926738 + L1MB8 LINE L1 5615 6108 -70 4 1322 364 238 38 0 chrX 96723558 96723638 -69926658 - ID4 SINE ID 0 83 1 4 1322 915 288 98 46 chrX 96723638 96723694 -69926602 + L1MB8 LINE L1 6109 6161 -17 4 1322 198 241 67 33 chrX 96724647 96724707 -69925589 - L2a LINE L2 -16 3410 3349 4 1322 186 242 0 0 chrX 96725884 96725950 -69924346 + G-rich Low_complexity Low_complexity 1 66 0 4 1322 275 176 0 19 chrX 96726007 96726059 -69924237 + MADE2 DNA Mariner 1 51 -29 4 1322 238 319 169 52 chrX 96726471 96726643 -69923653 + L3b LINE CR1 269 460 -22 4 1322 192 280 143 26 chrX 96727213 96727290 -69923006 + MIRc SINE MIR 120 205 -63 4 1322 437 237 16 81 chrX 96727297 96727421 -69922875 + PB1D10 SINE Alu 2 117 0 4 1322 370 181 41 14 chrX 96727589 96727662 -69922634 - ID4_ SINE ID -7 76 2 4 1322 206 387 73 28 chrX 96728779 96728888 -69921408 - MIRb SINE MIR -29 239 126 4 1322 270 191 23 2 chrX 96729199 96729286 -69921010 + B1F1 SINE Alu 31 142 -7 4 1322 219 339 52 41 chrX 96729570 96729742 -69920554 + L2a LINE L2 2884 3057 -362 4 1322 249 297 0 83 chrX 96729885 96730006 -69920290 - B1_Mus2 SINE Alu -34 113 3 4 1322 227 275 35 60 chrX 96730117 96730252 -69920044 + L2a LINE L2 3225 3403 -23 4 1322 255 206 53 53 chrX 96730309 96730392 -69919904 + MIRb SINE MIR 164 250 -18 4 1322 375 23 0 0 chrX 96730926 96730970 -69919326 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1323 435 325 97 44 chrX 96731343 96731591 -69918705 - MIR SINE MIR 0 262 2 4 1323 219 336 51 66 chrX 96731737 96731874 -69918422 + MIRm SINE MIR 80 214 -62 4 1323 378 0 0 0 chrX 96731906 96731948 -69918348 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1323 265 327 97 0 chrX 96731998 96732111 -69918185 - MIRc SINE MIR -107 161 38 4 1323 571 304 82 0 chrX 96732348 96732519 -69917777 - MER44B DNA MER2_type -352 198 14 4 1323 3062 259 99 35 chrX 96732524 96733161 -69917135 - L1MC3 LINE L1 -62 7723 7017 4 1323 207 69 0 0 chrX 96733161 96733190 -69917106 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 4 1323 3062 259 99 35 chrX 96733190 96733756 -69916540 - L1MC3 LINE L1 -769 7016 6444 4 1323 308 369 99 18 chrX 96734421 96734528 -69915768 + FordPrefect DNA Tip100 254 366 -1317 4 1323 396 0 0 0 chrX 96734528 96734572 -69915724 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 4 1323 308 369 99 18 chrX 96734572 96734635 -69915661 + FordPrefect DNA Tip100 367 437 -1246 4 1323 269 276 130 30 chrX 96734944 96735075 -69915221 - MIRb SINE MIR 0 268 125 4 1323 455 328 111 35 chrX 96736061 96736260 -69914036 - MIRb SINE MIR -35 233 20 4 1323 261 214 96 41 chrX 96736357 96736430 -69913866 - ID4_ SINE ID -6 77 1 4 1323 264 322 107 23 chrX 96736829 96736974 -69913322 - MIR SINE MIR -95 173 17 4 1323 1207 205 0 5 chrX 96736974 96737180 -69913116 - B3 SINE B2 -11 205 1 4 1323 242 325 110 74 chrX 96737180 96737197 -69913099 - MIRb SINE MIR -252 16 5 4 1323 278 209 106 36 chrX 96738103 96738215 -69912081 - B3A SINE B2 -4 212 2 4 1323 1075 84 0 0 chrX 96738668 96738810 -69911486 - B1_Mus2 SINE Alu 0 147 6 4 1323 219 311 51 43 chrX 96738938 96739076 -69911220 - MIR3 SINE MIR -68 140 2 4 1323 181 328 96 34 chrX 96739150 96739327 -69910969 + L2b LINE L2 3165 3352 -23 4 1323 304 295 58 32 chrX 96739569 96739723 -69910573 + MER33 DNA MER1_type 50 207 -117 4 1323 1269 41 0 0 chrX 96740147 96740292 -69910004 + B1_Mus2 SINE Alu 3 147 0 4 1323 419 286 10 0 chrX 96741141 96741239 -69909057 + PB1D10 SINE Alu 1 99 -18 4 1323 22 56 0 0 chrX 96741268 96741304 -69908992 + AT_rich Low_complexity Low_complexity 1 36 0 4 1323 388 268 131 21 chrX 96741503 96741648 -69908648 + RSINE1 SINE B4 5 165 0 4 1323 268 231 0 60 chrX 96741676 96741759 -69908537 + L1MB8 LINE L1 6101 6178 0 4 1323 331 298 18 107 chrX 96741760 96741929 -69908367 + MIR SINE MIR 74 234 -34 4 1323 216 305 0 0 chrX 96741952 96742011 -69908285 - MIRb SINE MIR -34 234 176 4 1323 270 336 58 41 chrX 96744734 96744855 -69905441 - B1F SINE Alu -16 133 11 5 1323 254 318 15 29 chrX 96747338 96747474 -69902822 + CT-rich Low_complexity Low_complexity 2 135 0 5 1323 546 286 0 39 chrX 96748135 96748288 -69902008 - MLT1A0 LTR MaLR 0 365 219 5 1323 261 282 107 18 chrX 96748340 96748452 -69901844 - MLT1A0 LTR MaLR -240 134 13 5 1323 337 330 8 17 chrX 96748490 96748607 -69901689 - Charlie8 DNA MER1_type -2260 168 53 5 1323 446 281 221 6 chrX 96748854 96749051 -69901245 + MIR SINE MIR 12 257 -11 5 1323 529 179 219 0 chrX 96749356 96749479 -69900817 - B1_Mur4 SINE Alu 0 150 1 5 1323 396 0 0 0 chrX 96749636 96749680 -69900616 + (TC)n Simple_repeat Simple_repeat 2 45 0 5 1323 387 0 0 0 chrX 96750198 96750241 -69900055 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1323 342 0 0 0 chrX 96750241 96750278 -69900018 + (GA)n Simple_repeat Simple_repeat 2 39 0 5 1323 351 0 0 0 chrX 96750376 96750415 -69899881 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1323 333 0 0 0 chrX 96750415 96750451 -69899845 + (GA)n Simple_repeat Simple_repeat 1 37 0 5 1323 210 356 0 0 chrX 96750587 96750646 -69899650 + B4A SINE B4 86 144 -148 5 1323 250 278 167 0 chrX 96750593 96750665 -69899631 + B1F1 SINE Alu 7 90 -27 5 1323 243 0 0 0 chrX 96750677 96750704 -69899592 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1323 378 0 0 0 chrX 96751168 96751210 -69899086 + (TA)n Simple_repeat Simple_repeat 1 42 0 5 1323 226 289 197 15 chrX 96751536 96751673 -69898623 - L2 LINE L2 -461 2958 2797 5 1323 726 291 67 35 chrX 96751756 96752101 -69898195 + L1M5 LINE L1 5335 5690 -434 5 1323 378 280 184 6 chrX 96753417 96753575 -69896721 + HAL1-3A_ME LINE L1 1976 2161 -697 5 1323 361 231 85 32 chrX 96754810 96754904 -69895392 + PB1 SINE Alu 29 127 0 5 1323 213 196 0 0 chrX 96755143 96755194 -69895102 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 5 1323 522 0 0 0 chrX 96756393 96756451 -69893845 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 1323 377 250 17 51 chrX 96756833 96756951 -69893345 + PB1D9 SINE Alu 2 115 -5 5 1323 402 360 16 41 chrX 96756972 96757166 -69893130 + ORR1E LTR MaLR 1 189 -170 5 1323 213 358 42 49 chrX 96758268 96758412 -69891884 - L2b LINE L2 0 3375 3233 5 1323 632 250 73 39 chrX 96758653 96758678 -69891618 - B3 SINE B2 -31 185 164 5 1323 342 0 0 0 chrX 96758678 96758716 -69891580 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1323 725 235 48 1 chrX 96758716 96758869 -69891427 - B3A SINE B2 -53 163 1 5 1323 370 250 0 83 chrX 96758869 96758949 -69891347 + B1F SINE Alu 33 104 -45 5 1323 699 99 0 0 chrX 96758956 96759057 -69891239 + (GGAA)n Simple_repeat Simple_repeat 1 101 0 5 1323 393 266 0 35 chrX 96759057 96759163 -69891133 + B1F1 SINE Alu 46 147 -2 5 1323 207 0 0 0 chrX 96759166 96759189 -69891107 + (CCAA)n Simple_repeat Simple_repeat 2 24 0 5 1323 664 222 59 0 chrX 96759202 96759337 -69890959 + B1_Mur2 SINE Alu 2 144 -5 5 1323 584 388 62 32 chrX 96760195 96760600 -69889696 + MLT1J LTR MaLR 12 428 -84 5 1323 465 203 148 39 chrX 96760619 96760747 -69889549 - B1_Mur3 SINE Alu -6 143 2 5 1323 495 0 0 0 chrX 96760755 96760810 -69889486 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1323 639 160 61 53 chrX 96760811 96760943 -69889353 - B1_Mur2 SINE Alu -9 140 8 5 1323 383 287 11 0 chrX 96761293 96761387 -69888909 - MIR SINE MIR -67 141 47 5 1323 376 320 12 55 chrX 96761422 96761587 -69888709 - MER5A DNA MER1_type -31 158 1 5 1323 1038 234 5 5 chrX 96762169 96762375 -69887921 + B3 SINE B2 5 210 -6 5 1323 684 0 0 0 chrX 96763480 96763556 -69886740 + (TC)n Simple_repeat Simple_repeat 1 76 0 5 1323 330 258 154 46 chrX 96764250 96764380 -69885916 - MIRb SINE MIR -32 236 93 5 1323 258 349 45 30 chrX 96764935 96765068 -69885228 + MIRb SINE MIR 1 135 -133 5 1323 782 152 16 26 chrX 96765102 96765264 -69885032 + B2_Mm2 SINE B2 8 167 -26 5 1323 180 0 0 0 chrX 96765276 96765296 -69885000 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 5 1323 487 326 78 18 chrX 96766669 96766888 -69883408 - MIR SINE MIR -11 251 20 5 1323 242 282 0 14 chrX 96767013 96767085 -69883211 - MIRb SINE MIR -95 173 103 5 1323 333 0 0 0 chrX 96767845 96767882 -69882414 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1323 267 183 118 35 chrX 96767970 96768055 -69882241 + MIRm SINE MIR 61 152 -116 5 1323 351 0 0 0 chrX 96768842 96768881 -69881415 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1323 190 364 34 11 chrX 96768907 96768996 -69881300 + MIR SINE MIR 61 151 -57 5 1323 270 373 39 31 chrX 96770830 96770960 -69879336 + MIR3 SINE MIR 35 165 -43 5 1323 190 384 32 8 chrX 96771498 96771624 -69878672 + MIR SINE MIR 113 241 -21 5 1323 534 289 75 41 chrX 96771718 96771807 -69878489 - B4 SINE B4 -2 290 157 5 1323 580 141 111 0 chrX 96771807 96771906 -69878390 - B1_Mus2 SINE Alu 0 147 38 5 1323 534 289 75 41 chrX 96771906 96772007 -69878289 - B4 SINE B4 -2 156 2 5 1323 273 67 49 16 chrX 96772041 96772102 -69878194 + (TTTTG)n Simple_repeat Simple_repeat 3 65 0 5 1323 1209 61 0 0 chrX 96772102 96772249 -69878047 - B1_Mus2 SINE Alu 0 147 1 5 1323 690 268 62 129 chrX 96772250 96772490 -69877806 - B4A SINE B4 -63 229 6 5 1323 506 316 6 72 chrX 96772497 96772664 -69877632 - ID_B1 SINE B4 -67 157 2 5 1323 1266 152 4 59 chrX 96772777 96772927 -69877369 - URR1B DNA MER1_type 0 225 79 5 1323 201 74 0 0 chrX 96772935 96772962 -69877334 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1323 429 93 485 20 chrX 96772962 96773052 -69877244 - B1_Mus2 SINE Alu -9 138 1 5 1323 1266 152 4 59 chrX 96773052 96773139 -69877157 - URR1B DNA MER1_type -147 78 1 5 1323 268 313 120 15 chrX 96773173 96773306 -69876990 - MIRm SINE MIR -110 166 20 5 1323 754 222 66 53 chrX 96774621 96774849 -69875447 + Tigger15a DNA TcMar 153 383 -332 5 1323 768 173 0 61 chrX 96775024 96775172 -69875124 + B1_Mur2 SINE Alu 1 139 -10 5 1323 264 59 0 0 chrX 96775172 96775206 -69875090 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 1323 297 282 0 60 chrX 96775231 96775252 -69875044 + B4A SINE B4 70 85 -207 5 1323 403 243 0 0 chrX 96775252 96775326 -69874970 + PB1D10 SINE Alu 1 74 -43 5 1323 245 230 24 98 chrX 96775262 96775344 -69874952 + MT2B2 LTR ERVL 175 250 -334 5 1323 247 246 16 0 chrX 96775386 96775447 -69874849 + PB1 SINE Alu 30 91 -36 5 1323 271 316 39 39 chrX 96775476 96775578 -69874718 - PB1 SINE Alu -5 122 21 5 1323 373 301 88 14 chrX 96775724 96775872 -69874424 + MIRc SINE MIR 28 186 -82 5 1323 244 308 111 15 chrX 96776959 96777125 -69873171 - MIRb SINE MIR -82 186 2 5 1323 222 208 0 0 chrX 96777799 96777847 -69872449 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 5 1323 306 374 0 0 chrX 96777945 96778052 -69872244 + MIR SINE MIR 106 212 -50 5 1323 294 29 0 0 chrX 96778053 96778088 -69872208 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1323 584 266 49 65 chrX 96778096 96778281 -69872015 + B3A SINE B2 1 182 -16 5 1323 866 253 17 0 chrX 96778331 96778509 -69871787 - B3A SINE B2 -16 182 2 5 1323 342 0 0 0 chrX 96778635 96778673 -69871623 + (TC)n Simple_repeat Simple_repeat 2 39 0 5 1323 622 91 20 0 chrX 96778673 96778771 -69871525 + (TA)n Simple_repeat Simple_repeat 2 102 0 5 1323 321 306 44 22 chrX 96778827 96778964 -69871332 + B1_Mus1 SINE Alu 3 142 -6 5 1323 453 270 43 61 chrX 96778964 96779016 -69871280 + ID_B1 SINE B4 99 272 -20 5 1323 226 163 61 0 chrX 96779791 96779840 -69870456 + MER103 DNA DNA 55 106 -60 5 1323 419 274 22 14 chrX 96779980 96780117 -69870179 - PB1D10 SINE Alu -5 144 5 5 1323 21 0 0 0 chrX 96780141 96780162 -69870134 + AT_rich Low_complexity Low_complexity 1 21 0 5 1323 2633 219 72 42 chrX 96780210 96780920 -69869376 - Lx8 LINE L1 -386 7087 6357 5 1323 325 287 11 0 chrX 96781500 96781594 -69868702 + MER53 DNA hAT 96 190 -3 5 1323 1010 270 9 17 chrX 96782060 96782290 -69868006 + B4A SINE B4 2 229 -63 5 1323 613 214 24 0 chrX 96782297 96782423 -69867873 + B1_Mur1 SINE Alu 21 149 0 5 1323 399 239 0 0 chrX 96782493 96782602 -69867694 + (CA)n Simple_repeat Simple_repeat 2 110 0 5 1323 1368 101 0 0 chrX 96783152 96783690 -69866606 + (TTCC)n Simple_repeat Simple_repeat 1 538 0 5 1323 297 167 0 0 chrX 96783692 96783746 -69866550 + CT-rich Low_complexity Low_complexity 1 54 0 5 1323 346 272 11 11 chrX 96783852 96783945 -69866351 - MIR3 SINE MIR -18 190 98 5 1323 255 333 54 9 chrX 96784003 96784115 -69866181 - MIRc SINE MIR -120 148 32 5 1323 881 227 9 94 chrX 96784127 96784351 -69865945 + B3 SINE B2 6 210 -6 5 1323 366 281 38 2 chrX 96784545 96784732 -69865564 - L1MA4 LINE L1 -346 5966 5761 5 1323 192 274 206 0 chrX 96784899 96784972 -69865324 - MIRb SINE MIR -73 195 108 5 1323 267 284 0 38 chrX 96785408 96785514 -69864782 + GA-rich Low_complexity Low_complexity 5 106 0 5 1323 313 263 13 13 chrX 96785601 96785678 -69864618 + L2b LINE L2 3298 3374 -1 5 1323 261 0 0 0 chrX 96786175 96786204 -69864092 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 1323 972 93 17 17 chrX 96786204 96786379 -69863917 + (TCTCC)n Simple_repeat Simple_repeat 2 176 0 5 1323 501 280 3 16 chrX 96786513 96786642 -69863654 + RSINE1 SINE B4 2 121 -171 5 1323 369 0 0 0 chrX 96787076 96787117 -69863179 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1323 528 16 0 0 chrX 96787117 96787177 -69863119 + (GA)n Simple_repeat Simple_repeat 1 61 0 6 1323 237 65 0 0 chrX 96787484 96787515 -69862781 + (TCC)n Simple_repeat Simple_repeat 3 33 0 6 1323 248 247 12 121 chrX 96789171 96789294 -69861002 - MIRm SINE MIR -74 194 84 6 1323 246 81 0 0 chrX 96789716 96789753 -69860543 + (G)n Simple_repeat Simple_repeat 1 37 0 6 1323 235 344 65 0 chrX 96790138 96790231 -69860065 - MER5B DNA MER1_type -12 166 68 6 1323 207 242 14 101 chrX 96790496 96790565 -69859731 - MIR SINE MIR -87 121 59 6 1323 423 52 0 0 chrX 96790658 96790716 -69859580 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 1323 200 346 12 0 chrX 96790801 96790882 -69859414 - MIR SINE MIR -84 124 43 6 1323 471 272 20 47 chrX 96791620 96791797 -69858499 - MIR SINE MIR -1 261 87 6 1323 1287 34 0 0 chrX 96791797 96791943 -69858353 + B1_Mm SINE Alu 1 146 -1 6 1323 334 253 0 57 chrX 96791943 96791959 -69858337 - MIRm SINE MIR -183 93 81 6 1323 181 340 0 0 chrX 96793824 96793877 -69856419 + MIR3 SINE MIR 115 167 -41 6 1323 468 248 26 37 chrX 96794234 96794373 -69855923 - B1F SINE Alu -1 149 26 6 1323 191 218 89 18 chrX 96794409 96794465 -69855831 + L2a LINE L2 3283 3342 -84 6 1323 4601 233 56 15 chrX 96794497 96795599 -69854697 + Lx6 LINE L1 5849 6995 -465 6 1323 960 276 50 7 chrX 96795603 96795902 -69854394 + Lx6 LINE L1 7120 7431 -29 6 1323 335 172 0 0 chrX 96795909 96795967 -69854329 + Lx6 LINE L1 6988 7045 -415 6 1323 798 143 0 0 chrX 96795967 96796100 -69854196 + (TA)n Simple_repeat Simple_repeat 1 133 0 6 1323 270 231 0 0 chrX 96796090 96796155 -69854141 + (CACG)n Simple_repeat Simple_repeat 1 65 0 6 1323 575 262 20 27 chrX 96796158 96796307 -69853989 + B1F SINE Alu 1 148 -1 6 1323 532 277 0 48 chrX 96796312 96796437 -69853859 + RSINE1 SINE B4 6 124 -41 6 1323 205 370 0 0 chrX 96796438 96796519 -69853777 + (TATATG)n Simple_repeat Simple_repeat 6 86 0 6 1323 25 0 0 0 chrX 96796645 96796670 -69853626 + AT_rich Low_complexity Low_complexity 1 25 0 6 1323 249 237 13 0 chrX 96796680 96796756 -69853540 + L1M3 LINE L1 4777 4853 -1287 6 1323 557 235 44 7 chrX 96796768 96796905 -69853391 - B1_Mur1 SINE Alu -7 142 1 6 1323 190 188 0 0 chrX 96797059 96797091 -69853205 - MIR SINE MIR -14 248 217 6 1323 23 0 0 0 chrX 96797694 96797717 -69852579 + AT_rich Low_complexity Low_complexity 1 23 0 6 1323 204 337 48 0 chrX 96798399 96798482 -69851814 - MIR SINE MIR -153 109 23 6 1323 394 304 11 75 chrX 96798501 96798675 -69851621 + RSINE1 SINE B4 3 165 0 6 1323 268 261 54 11 chrX 96798740 96798833 -69851463 + MER53 DNA hAT 15 111 -82 6 1323 780 283 55 55 chrX 96798911 96799165 -69851131 + MER2 DNA MER2_type 1 254 -91 6 1323 224 318 83 38 chrX 96799447 96799604 -69850692 + MIRc SINE MIR 33 196 -72 6 1323 306 0 0 0 chrX 96800138 96800172 -69850124 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1323 414 0 0 0 chrX 96801945 96801991 -69848305 + (GA)n Simple_repeat Simple_repeat 1 46 0 6 1323 232 344 0 50 chrX 96802754 96802855 -69847441 - PB1D10 SINE Alu -1 116 21 6 1323 234 302 70 0 chrX 96802863 96802949 -69847347 - MIR SINE MIR -114 148 57 6 1323 230 274 191 31 chrX 96805131 96805293 -69845003 + MIRm SINE MIR 13 200 -62 6 1323 483 281 79 2 chrX 96806059 96806229 -69844067 + MIR SINE MIR 30 204 -58 6 1323 251 253 19 16 chrX 96806570 96806632 -69843664 + MIRm SINE MIR 92 160 -116 6 1323 1326 78 0 0 chrX 96806841 96807021 -69843275 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 6 1323 201 121 0 0 chrX 96807031 96807064 -69843232 + (TC)n Simple_repeat Simple_repeat 1 33 0 6 1323 186 43 0 0 chrX 96807070 96807093 -69843203 + (TA)n Simple_repeat Simple_repeat 1 23 0 6 1323 240 149 0 0 chrX 96807793 96807840 -69842456 + (CTG)n Simple_repeat Simple_repeat 2 48 0 6 1323 259 256 58 58 chrX 96808335 96808422 -69841874 + MIR SINE MIR 38 124 -138 6 1323 23 0 0 0 chrX 96809069 96809092 -69841204 + AT_rich Low_complexity Low_complexity 1 23 0 6 1323 989 248 105 103 chrX 96809132 96809351 -69840945 - L1M4 LINE L1 -402 5782 5596 6 1323 311 259 25 0 chrX 96809351 96809432 -69840864 + ID4 SINE ID 1 83 0 6 1323 989 248 105 103 chrX 96809432 96809715 -69840581 - L1M4 LINE L1 -589 5595 5279 6 1323 834 167 36 0 chrX 96809727 96809865 -69840431 + B2_Mm2 SINE B2 3 145 -50 6 1323 814 241 56 35 chrX 96809934 96809956 -69840340 - B3 SINE B2 -5 211 190 6 1323 2201 114 3 61 chrX 96809956 96810302 -69839994 - ORR1A3 LTR MaLR 0 326 1 6 1323 814 241 56 35 chrX 96810302 96810477 -69839819 - B3 SINE B2 -27 189 10 6 1323 380 248 133 7 chrX 96810623 96810832 -69839464 - L1M4 LINE L1 -1653 4487 4260 6 1323 1069 307 81 14 chrX 96810913 96811580 -69838716 - L1M4 LINE L1 -2157 3989 3278 6 1323 272 282 35 12 chrX 96811696 96811782 -69838514 + B3 SINE B2 129 216 0 6 1323 504 179 24 0 chrX 96812013 96812097 -69838199 + PB1D9 SINE Alu 26 111 -9 6 1323 741 242 139 83 chrX 96812097 96812240 -69838056 - L1M4 LINE L1 -3401 2745 2563 6 1323 1966 179 83 3 chrX 96812240 96812627 -69837669 - MTD LTR MaLR 0 419 2 6 1323 741 242 139 83 chrX 96812627 96812825 -69837471 - L1M4 LINE L1 -3584 2562 2378 6 1323 408 319 0 0 chrX 96812825 96812941 -69837355 - PB1D10 SINE Alu 0 117 2 6 1323 741 242 139 83 chrX 96812941 96813102 -69837194 - L1M4 LINE L1 -3769 2377 2214 6 1323 356 267 56 0 chrX 96813102 96813192 -69837104 - PB1D10 SINE Alu -5 112 18 6 1323 596 281 96 47 chrX 96813374 96813449 -69836847 - L1MB4 LINE L1 -88 6083 6000 6 1323 764 216 0 0 chrX 96813449 96813597 -69836699 - B1_Mur3 SINE Alu 0 149 2 6 1323 674 266 80 53 chrX 96813597 96813717 -69836579 - L1MB4 LINE L1 -172 5999 5875 6 1323 654 225 43 7 chrX 96813717 96813856 -69836440 - B1_Mur2 SINE Alu -5 144 1 6 1323 674 276 206 42 chrX 96813856 96814290 -69836006 - L1MB4 LINE L1 -297 5883 5360 6 1323 974 272 151 64 chrX 96814349 96815453 -69834843 - L1MB4 LINE L1 -800 5383 4185 6 1323 894 227 34 10 chrX 96815528 96815733 -69834563 + B3 SINE B2 7 216 0 6 1323 636 292 28 28 chrX 96815735 96816052 -69834244 - L1M4 LINE L1 -1829 4815 4499 6 1323 249 316 10 119 chrX 96816056 96816257 -69834039 - B2_Mm2 SINE B2 -14 181 3 6 1323 257 27 54 0 chrX 96816292 96816329 -69833967 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 1323 341 340 146 36 chrX 96816353 96816606 -69833690 - L1M4 LINE L1 -6160 382 102 6 1323 2587 248 94 57 chrX 96816606 96817448 -69832848 + RMER19B LTR ERVK 1 837 -65 6 1323 249 33 0 0 chrX 96817452 96817482 -69832814 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 6 1323 24 0 0 0 chrX 96817491 96817515 -69832781 + AT_rich Low_complexity Low_complexity 1 24 0 6 1323 218 350 67 0 chrX 96817591 96817711 -69832585 - L2c LINE L2 -264 3123 2996 6 1323 458 338 46 79 chrX 96817750 96817991 -69832305 - MLT1K LTR MaLR 0 595 363 6 1323 193 292 31 55 chrX 96818484 96818611 -69831685 - MIR3 SINE MIR -38 170 47 6 1323 234 62 0 0 chrX 96818711 96818743 -69831553 + (TTTTTG)n Simple_repeat Simple_repeat 5 36 0 6 1323 375 263 80 69 chrX 96818837 96819025 -69831271 - L2c LINE L2 -515 2904 2715 6 1323 243 337 10 29 chrX 96819029 96819133 -69831163 + L2a LINE L2 3325 3426 0 6 1323 502 295 106 13 chrX 96819182 96819333 -69830963 - RSINE1 SINE B4 0 165 1 6 1323 327 25 0 0 chrX 96819402 96819442 -69830854 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 1323 353 221 78 0 chrX 96819540 96819617 -69830679 - ID4 SINE ID 0 83 1 6 1323 246 321 12 0 chrX 96821042 96821123 -69829173 + ID4_ SINE ID 2 83 0 6 1323 528 258 8 0 chrX 96821136 96821256 -69829040 + B3A SINE B2 1 121 -77 6 1323 423 0 0 0 chrX 96821266 96821313 -69828983 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1323 342 0 0 0 chrX 96821313 96821350 -69828946 + (GA)n Simple_repeat Simple_repeat 2 39 0 6 1323 876 268 5 32 chrX 96821363 96821579 -69828717 - B3 SINE B2 0 216 7 6 1323 181 329 12 35 chrX 96821724 96821809 -69828487 + L2 LINE L2 2645 2727 -692 6 1323 366 257 146 19 chrX 96821980 96822083 -69828213 + PB1D10 SINE Alu 1 116 -1 6 1323 323 358 47 33 chrX 96823464 96823678 -69826618 - L2 LINE L2 -559 2860 2644 6 1323 240 111 0 0 chrX 96824066 96824111 -69826185 + (T)n Simple_repeat Simple_repeat 1 45 0 6 1323 191 288 26 40 chrX 96824164 96824240 -69826056 - L4 LINE RTE -1322 707 633 6 1323 217 227 0 0 chrX 96824254 96824298 -69825998 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1323 218 309 111 24 chrX 96824763 96824889 -69825407 + MIRb SINE MIR 38 174 -94 6 1323 357 294 139 32 chrX 96826391 96826549 -69823747 + L3 LINE CR1 4243 4417 -72 6 1323 269 306 101 53 chrX 96826687 96826856 -69823440 - MamRep137 DNA TcMar? -101 343 167 6 1323 354 226 0 0 chrX 96827638 96827700 -69822596 - B1F SINE Alu -72 77 16 6 1323 482 220 22 0 chrX 96828143 96828234 -69822062 + B1F1 SINE Alu 1 93 -56 6 1323 451 236 128 41 chrX 96828310 96828336 -69821960 - B2_Mm2 SINE B2 -8 187 162 6 1323 471 35 0 0 chrX 96828336 96828393 -69821903 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1323 615 234 114 1 chrX 96828393 96828538 -69821758 - B3A SINE B2 -34 161 1 6 1323 267 337 71 54 chrX 96828640 96828935 -69821361 + L2a LINE L2 2969 3268 -158 6 1323 492 32 0 0 chrX 96829028 96829090 -69821206 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 1323 1477 63 21 0 chrX 96829572 96829761 -69820535 - B2_Mm2 SINE B2 -1 194 2 6 1323 6615 85 20 3 chrX 96829964 96830906 -69819390 - Lx LINE L1 -3 6651 5694 6 1323 6568 141 4 5 chrX 96830902 96831999 -69818297 + Lx3B LINE L1 4588 5685 -1288 6 1323 356 305 9 9 chrX 96832091 96832197 -69818099 + PB1D10 SINE Alu 5 110 -7 6 1323 1155 261 91 9 chrX 96832714 96833054 -69817242 - ORR1D2 LTR MaLR -2 368 1 6 1323 2391 187 25 2 chrX 96833108 96833617 -69816679 + RCHARR1 DNA MER1_type 323 843 -131 6 1323 243 0 0 0 chrX 96833671 96833698 -69816598 + (CAG)n Simple_repeat Simple_repeat 3 29 0 6 1323 231 273 10 102 chrX 96833891 96833989 -69816307 + MLT2F LTR ERVL 440 528 -135 6 1323 412 224 34 93 chrX 96835119 96835237 -69815059 + PB1D9 SINE Alu 9 119 -1 7 1323 953 246 25 5 chrX 96835322 96835553 -69814743 - ID_B1 SINE B4 -46 246 12 7 1323 400 238 0 0 chrX 96835707 96835787 -69814509 - ID4_ SINE ID -3 80 1 7 1323 294 29 0 0 chrX 96835962 96835997 -69814299 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 1323 240 35 0 0 chrX 96835997 96836025 -69814271 + (CG)n Simple_repeat Simple_repeat 2 30 0 7 1323 218 289 67 42 chrX 96836792 96836911 -69813385 + L2a LINE L2 2665 2786 -633 7 1323 281 400 37 11 chrX 96836998 96837271 -69813025 + L2a LINE L2 2957 3236 -190 7 1323 213 39 0 0 chrX 96837399 96837425 -69812871 + (T)n Simple_repeat Simple_repeat 1 26 0 7 1323 5586 34 0 0 chrX 96837638 96838308 -69811988 - L1Md_T LINE L1 0 6582 5929 7 1323 540 67 0 62 chrX 96838308 96838388 -69811908 + L1Md_T LINE L1 5875 5949 -633 7 1323 631 259 0 0 chrX 96838616 96838759 -69811537 + ID_B1 SINE B4 80 222 -2 7 1323 260 268 0 85 chrX 96838792 96838898 -69811398 + L1MB4 LINE L1 1346 1442 -5165 7 1323 202 294 162 0 chrX 96839034 96839102 -69811194 + MIRc SINE MIR 25 103 -165 7 1323 418 267 47 24 chrX 96839467 96839636 -69810660 + L1MB4 LINE L1 7 179 -6428 7 1323 894 263 174 18 chrX 96839639 96840196 -69810100 + L1MB4 LINE L1 911 1554 -5053 7 1323 3056 210 130 32 chrX 96840196 96840331 -69809965 + Lx9 LINE L1 4868 4999 -848 7 1323 4005 53 0 6 chrX 96840331 96840824 -69809472 - L1_Mus1 LINE L1 0 6567 6078 7 1323 3056 210 130 32 chrX 96840824 96841299 -69808997 + Lx9 LINE L1 5000 5528 -319 7 1323 582 15 0 0 chrX 96841299 96841366 -69808930 + (TAAAA)n Simple_repeat Simple_repeat 3 69 0 7 1323 3056 210 130 32 chrX 96841366 96841631 -69808665 + Lx9 LINE L1 5529 5829 -18 7 1323 1246 286 23 14 chrX 96841805 96842156 -69808140 + Lx9 LINE L1 6379 6732 -912 7 1323 327 85 0 0 chrX 96842282 96842329 -69807967 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 7 1323 1482 243 68 33 chrX 96842331 96842727 -69807569 + Lx9 LINE L1 6737 7146 -498 7 1323 411 312 68 34 chrX 96842760 96842966 -69807330 + Lx9 LINE L1 7226 7438 -206 7 1323 324 0 0 0 chrX 96842985 96843021 -69807275 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 1323 495 258 0 58 chrX 96843209 96843381 -69806915 + L1M4 LINE L1 4614 4775 -1371 7 1323 183 253 105 13 chrX 96843685 96843761 -69806535 - MIR3 SINE MIR -15 193 111 7 1323 255 307 64 25 chrX 96844101 96844258 -69806038 + RMER15 LTR ERVL 337 499 -76 7 1323 28 29 0 0 chrX 96845739 96845774 -69804522 + AT_rich Low_complexity Low_complexity 1 35 0 7 1323 260 364 7 48 chrX 96846114 96846186 -69804110 - MIRm SINE MIR -133 143 77 7 1323 367 217 0 0 chrX 96846186 96846255 -69804041 - ID4 SINE ID -13 70 2 7 1323 260 364 7 48 chrX 96846255 96846329 -69803967 - MIRm SINE MIR -200 76 3 7 1323 216 0 0 0 chrX 96846593 96846617 -69803679 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 1323 239 36 89 18 chrX 96847116 96847172 -69803124 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 7 1323 210 158 0 0 chrX 96847189 96847227 -69803069 + A-rich Low_complexity Low_complexity 1 38 0 7 1323 580 334 40 73 chrX 96848155 96848526 -69801770 - ORR1E LTR MaLR 0 359 1 7 1323 718 338 47 69 chrX 96848584 96849035 -69801261 + MLT1L LTR MaLR 170 610 0 7 1323 447 233 41 8 chrX 96849356 96849477 -69800819 - B1F SINE Alu -11 138 14 7 1323 212 282 13 53 chrX 96849735 96849810 -69800486 + MIRb SINE MIR 197 268 0 7 1323 474 33 0 0 chrX 96851095 96851155 -69799141 + (CA)n Simple_repeat Simple_repeat 2 61 0 7 1323 368 293 114 20 chrX 96852286 96852495 -69797801 + MIRb SINE MIR 29 265 -3 7 1323 865 72 8 8 chrX 96852855 96852982 -69797314 + (GAAA)n Simple_repeat Simple_repeat 4 130 0 7 1323 540 0 0 0 chrX 96855136 96855196 -69795100 + (GA)n Simple_repeat Simple_repeat 2 61 0 7 1323 312 301 28 62 chrX 96855656 96855801 -69794495 + MIRb SINE MIR 19 158 -110 7 1323 280 356 42 0 chrX 96855890 96856008 -69794288 - MIR SINE MIR -102 160 38 7 1323 844 244 30 10 chrX 96856111 96856314 -69793982 - B4 SINE B4 -2 290 84 7 1323 746 102 0 17 chrX 96856832 96856951 -69793345 + (GGAGA)n Simple_repeat Simple_repeat 4 120 0 7 1323 192 147 29 0 chrX 96857365 96857399 -69792897 - MIR3 SINE MIR -19 189 155 7 1323 504 0 0 0 chrX 96858289 96858345 -69791951 + (TC)n Simple_repeat Simple_repeat 2 57 0 7 1323 389 309 150 84 chrX 96859561 96859847 -69790449 - ORR1E LTR MaLR -51 308 4 7 1323 2904 263 109 44 chrX 96860901 96861847 -69788449 + MTE2b-int LTR MaLR 571 1577 -3 7 165 1419 253 47 8 chrX 96861850 96862213 -69788083 + MTE2b LTR MaLR 1 377 -2 7 1324 270 248 0 2 chrX 96862213 96862277 -69788019 - ID2 SINE ID -19 64 2 7 1324 317 294 33 0 chrX 96863177 96863269 -69787027 - MER44B DNA MER2_type -1 549 455 7 1324 774 48 0 0 chrX 96863269 96863372 -69786924 + (CA)n Simple_repeat Simple_repeat 2 104 0 7 1324 1196 201 48 37 chrX 96863372 96863667 -69786629 - ORR1C2 LTR MaLR -1 383 86 7 1324 207 0 0 0 chrX 96863682 96863705 -69786591 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1324 993 79 0 0 chrX 96863705 96863836 -69786460 - B1_Mus1 SINE Alu -7 141 11 7 1324 420 234 21 0 chrX 96863837 96863931 -69786365 - ORR1C2 LTR MaLR -278 96 1 7 1324 486 0 0 0 chrX 96863943 96863997 -69786299 + (CA)n Simple_repeat Simple_repeat 2 55 0 7 1324 1141 277 91 10 chrX 96864004 96864398 -69785898 - MER44B DNA MER2_type -115 435 10 7 1324 504 0 0 0 chrX 96864542 96864598 -69785698 + (CAAAA)n Simple_repeat Simple_repeat 2 57 0 7 1324 929 108 0 13 chrX 96865501 96865651 -69784645 + (TCTCC)n Simple_repeat Simple_repeat 5 152 0 7 1324 516 232 0 20 chrX 96867300 96867401 -69782895 + B3 SINE B2 30 128 -88 7 1324 418 242 119 13 chrX 96868257 96868416 -69781880 - L1MB8 LINE L1 -11 6167 5992 7 1324 382 252 72 42 chrX 96868420 96868625 -69781671 - MER31B LTR ERV1 0 543 257 7 1324 896 248 47 18 chrX 96868625 96868904 -69781392 - L1M4 LINE L1 -2352 3794 3508 7 1324 2064 269 38 118 chrX 96869032 96869717 -69780579 - Lx7 LINE L1 -382 7314 6676 7 1324 4381 55 9 0 chrX 96869717 96870259 -69780037 + L1Md_F2 LINE L1 6021 6567 -15 7 1324 2064 269 38 118 chrX 96870259 96870445 -69779851 - Lx7 LINE L1 -1021 6675 6513 7 1324 1062 147 16 0 chrX 96870446 96870630 -69779666 - RMER6C LTR ERVK -4 686 500 7 1324 7650 191 53 63 chrX 96870745 96872539 -69777757 - L1_Mur3 LINE L1 -1598 4282 2508 7 1324 2106 158 73 15 chrX 96872539 96872675 -69777621 + MTC LTR MaLR 1 142 -279 7 1324 423 0 0 0 chrX 96872675 96872722 -69777574 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 1324 2106 158 73 15 chrX 96872722 96872983 -69777313 + MTC LTR MaLR 143 420 -1 7 1324 7650 191 53 63 chrX 96872983 96873176 -69777120 - L1_Mur3 LINE L1 -3373 2507 2315 7 1324 9715 95 5 32 chrX 96873182 96875498 -69774798 - L1_Mus3 LINE L1 -1 6637 4389 7 1324 3386 207 39 90 chrX 96875501 96876092 -69774204 - L1_Mur3 LINE L1 -3578 2302 1747 7 1324 3786 44 60 14 chrX 96876092 96876574 -69773722 - L1_Mus1 LINE L1 -4 6563 6060 7 1324 3386 250 71 71 chrX 96876574 96877562 -69772734 - L1_Mur3 LINE L1 -4134 1746 751 7 1324 21 0 0 0 chrX 96877594 96877615 -69772681 + AT_rich Low_complexity Low_complexity 1 21 0 7 1324 830 238 90 0 chrX 96877626 96877815 -69772481 + B3 SINE B2 5 210 -6 7 1324 3037 81 8 0 chrX 96877892 96878289 -69772007 + MTB LTR MaLR 1 400 0 7 1324 558 307 32 5 chrX 96878340 96878530 -69771766 - B3A SINE B2 0 198 4 7 1324 280 291 47 0 chrX 96878571 96878657 -69771639 + B2_Mm2 SINE B2 5 94 -101 7 1324 304 344 172 64 chrX 96878650 96878883 -69771413 - MLT-int LTR MaLR -373 1362 1105 7 1324 338 311 38 8 chrX 96878968 96879101 -69771195 - B1F SINE Alu -1 148 12 7 1324 603 361 23 108 chrX 96879113 96879455 -69770841 - MLT-int LTR MaLR -753 982 670 7 1324 1753 185 62 22 chrX 96879460 96879864 -69770432 - RMER10A LTR ERVL -22 420 1 7 1324 258 302 38 23 chrX 96879864 96879995 -69770301 - MLT-int LTR MaLR -1074 661 529 7 1324 240 260 67 39 chrX 96880123 96880303 -69769993 - L1M4 LINE L1 -2881 3265 3081 7 1324 239 335 80 11 chrX 96880313 96880488 -69769808 + MIRb SINE MIR 74 260 -8 7 1324 396 0 0 0 chrX 96880526 96880570 -69769726 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 7 1324 243 303 37 103 chrX 96880589 96880725 -69769571 - RSINE1 SINE B4 -28 137 11 7 1324 315 292 28 19 chrX 96881724 96881832 -69768464 + MER5A DNA MER1_type 1 109 -80 7 1324 754 297 116 7 chrX 96882447 96882722 -69767574 + MTEa LTR MaLR 3 307 -72 7 1324 504 0 0 0 chrX 96882732 96882788 -69767508 + (TTTTG)n Simple_repeat Simple_repeat 1 56 0 7 1324 1127 75 0 12 chrX 96883147 96883309 -69766987 + B2_Mm2 SINE B2 2 161 -34 7 1324 360 0 0 0 chrX 96883311 96883351 -69766945 + (CAAT)n Simple_repeat Simple_repeat 2 41 0 7 1324 585 0 0 0 chrX 96883368 96883433 -69766863 + (TTCC)n Simple_repeat Simple_repeat 3 67 0 7 1324 678 182 0 24 chrX 96883434 96883558 -69766738 - B1_Mur4 SINE Alu -27 123 3 7 1324 522 114 0 0 chrX 96884495 96884574 -69765722 + (GA)n Simple_repeat Simple_repeat 2 80 0 7 1324 1852 245 85 58 chrX 96884599 96885476 -69764820 - L1MA5A LINE L1 -398 5899 4947 7 1324 431 235 78 10 chrX 96885476 96885579 -69764717 - PB1D10 SINE Alu -7 110 1 7 1324 889 232 104 71 chrX 96885579 96885630 -69764666 - L1MA5A LINE L1 -1164 4979 4936 7 1324 370 259 51 10 chrX 96885637 96885832 -69764464 - L1M5 LINE L1 -3096 3050 2848 7 1324 387 319 38 22 chrX 96885833 96886016 -69764280 + MLT1A0 LTR MaLR 4 189 -176 7 1324 254 290 0 0 chrX 96886552 96886614 -69763682 - MER50 LTR ERV1 -672 62 1 7 1324 608 262 32 18 chrX 96886616 96886793 -69763503 + MLT1A0 LTR MaLR 205 386 -4 7 1324 246 255 126 11 chrX 96886885 96886980 -69763316 + PB1D10 SINE Alu 2 107 -10 7 1324 984 248 5 14 chrX 96887164 96887381 -69762915 - B3 SINE B2 0 216 2 7 1324 337 303 123 31 chrX 96887471 96887699 -69762597 - L1M5 LINE L1 -3644 2502 2254 7 1324 298 309 117 44 chrX 96888313 96888542 -69761754 - L2a LINE L2 -1 3386 3150 7 1324 232 343 151 14 chrX 96888609 96888856 -69761440 - L2a LINE L2 -264 3162 2892 7 1324 657 58 0 0 chrX 96888958 96889044 -69761252 + (TTTTC)n Simple_repeat Simple_repeat 3 88 0 7 1324 301 284 0 0 chrX 96889137 96889218 -69761078 + CT-rich Low_complexity Low_complexity 1 81 0 7 1324 218 244 0 0 chrX 96889228 96889269 -69761027 - ID2 SINE ID -40 43 3 7 1324 470 266 95 33 chrX 96889282 96889492 -69760804 - L1MC5 LINE L1 -60 7901 7679 7 1324 263 389 39 6 chrX 96889495 96889676 -69760620 - L2a LINE L2 -568 2851 2665 7 1324 209 122 49 0 chrX 96891077 96891118 -69759178 + (ATGGTG)n Simple_repeat Simple_repeat 1 43 0 7 1324 267 192 0 55 chrX 96891123 96891178 -69759118 - MIRb SINE MIR -9 259 208 7 1324 444 37 0 0 chrX 96891178 96891232 -69759064 + (CA)n Simple_repeat Simple_repeat 2 55 0 7 1324 273 242 49 16 chrX 96891295 96891417 -69758879 - Lx9 LINE L1 -2 7642 7517 7 1324 411 21 0 0 chrX 96891424 96891472 -69758824 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 1324 248 246 87 0 chrX 96891473 96891542 -69758754 - Lx9 LINE L1 -182 7462 7388 7 1324 327 343 20 0 chrX 96891542 96891644 -69758652 - MIRb SINE MIR -145 123 20 8 1324 1185 255 27 111 chrX 96891669 96892075 -69758221 - MTEa LTR MaLR -2 377 6 8 1324 792 298 124 42 chrX 96892781 96893639 -69756657 - L1MA4A LINE L1 -372 5931 4948 8 1324 210 71 0 0 chrX 96893652 96893680 -69756616 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 8 1324 503 306 0 36 chrX 96893703 96893842 -69756454 - RSINE1 SINE B4 -31 134 1 8 1324 893 249 76 57 chrX 96893844 96894214 -69756082 - L1MA4A LINE L1 -1163 4980 4604 8 1324 391 284 21 0 chrX 96894428 96894569 -69755727 - L1MA4A LINE L1 -369 5931 5788 8 1324 565 274 40 12 chrX 96894568 96894816 -69755480 + L1P5 LINE L1 5354 5608 -548 8 1324 31805 69 25 5 chrX 96894893 96899439 -69750857 - L1Md_F2 LINE L1 -1 6581 2053 8 1324 6622 36 13 1 chrX 96899439 96900234 -69750062 - L1Md_T LINE L1 -2 6580 5777 8 1324 31805 122 73 45 chrX 96900234 96901793 -69748503 - L1Md_F2 LINE L1 -3831 2052 332 8 1324 1165 254 21 22 chrX 96901773 96902267 -69748029 - L1Md_F2 LINE L1 -5969 755 233 8 1324 562 213 113 17 chrX 96902297 96902536 -69747760 - Lx9 LINE L1 0 7644 7383 8 1324 5752 139 11 1 chrX 96902554 96903530 -69746766 + L1_Mus3 LINE L1 4670 5655 -228 8 1324 2479 59 6 6 chrX 96903538 96903864 -69746432 + IAPEY2_LTR LTR ERVK 32 357 0 8 1324 2338 70 0 15 chrX 96903864 96904200 -69746096 + L1_Mus3 LINE L1 5648 5978 -660 8 1324 248 269 38 13 chrX 96904197 96904276 -69746020 - L1_Mur3 LINE L1 -2031 3849 3769 8 1324 298 299 74 9 chrX 96904453 96904561 -69745735 - PB1D9 SINE Alu -5 115 1 8 1324 466 274 29 0 chrX 96904593 96904695 -69745601 - B1F SINE Alu -13 136 32 8 1324 443 284 93 13 chrX 96905008 96905158 -69745138 + MLT1I LTR MaLR 7 168 -243 8 1324 391 303 33 0 chrX 96905237 96905359 -69744937 + MLT1I LTR MaLR 284 409 -2 8 1324 421 272 81 7 chrX 96905964 96906112 -69744184 - MIR SINE MIR -15 247 89 8 1324 429 252 80 18 chrX 96906657 96906770 -69743526 + RSINE1 SINE B4 30 149 -16 8 1324 474 18 0 0 chrX 96906931 96906986 -69743310 + (TCC)n Simple_repeat Simple_repeat 3 57 0 8 1324 3318 33 5 0 chrX 96907854 96908250 -69742046 + L1Md_T LINE L1 6184 6581 -1 8 1324 256 176 175 10 chrX 96908562 96908665 -69741631 - Lx7 LINE L1 -16 7680 7561 8 1324 208 149 14 95 chrX 96908671 96908745 -69741551 + A-rich Low_complexity Low_complexity 4 71 0 8 1324 516 311 35 18 chrX 96908766 96908992 -69741304 - Lx7 LINE L1 -385 7311 7082 8 1324 537 287 7 27 chrX 96909443 96909590 -69740706 - B1F SINE Alu -5 144 1 8 1324 767 258 42 0 chrX 96909740 96909930 -69740366 - B3 SINE B2 -17 199 2 8 1324 396 303 16 32 chrX 96909937 96910063 -69740233 - PB1 SINE Alu -3 124 1 8 1324 832 284 81 8 chrX 96910069 96910467 -69739829 - L1M4c LINE L1 -4649 2182 1720 8 1324 225 209 69 69 chrX 96910471 96910543 -69739753 + B4A SINE B4 221 292 0 8 1324 490 248 334 59 chrX 96910640 96911060 -69739236 - L1M4c LINE L1 -5046 1600 1060 8 1324 1660 261 36 24 chrX 96911275 96911312 -69738984 - MTD LTR MaLR 0 419 388 8 1324 2212 137 12 79 chrX 96911312 96911717 -69738579 + ORR1C1 LTR MaLR 1 378 0 8 1324 1660 261 36 24 chrX 96911717 96912091 -69738205 - MTD LTR MaLR -32 387 3 8 1324 514 304 147 12 chrX 96912105 96912451 -69737845 - L1M4c LINE L1 -5656 886 494 8 1324 378 0 0 0 chrX 96912552 96912594 -69737702 + (TG)n Simple_repeat Simple_repeat 1 42 0 8 1324 3380 182 93 7 chrX 96912596 96912689 -69737607 - RMER1B Other Other -24 1042 949 8 1324 932 105 7 0 chrX 96912689 96912841 -69737455 + (GA)n Simple_repeat Simple_repeat 2 154 0 8 1324 3380 182 93 7 chrX 96912841 96913426 -69736870 - RMER1B Other Other -118 948 306 8 1324 975 249 124 24 chrX 96913421 96913873 -69736423 + Lx9 LINE L1 7148 7644 0 8 1324 366 234 0 0 chrX 96913919 96913983 -69736313 + B1_Mus2 SINE Alu 1 64 -83 8 1324 3193 199 87 16 chrX 96913999 96914143 -69736153 - Lx7 LINE L1 0 7696 7557 8 1324 321 26 0 0 chrX 96914143 96914181 -69736115 + (TAA)n Simple_repeat Simple_repeat 1 38 0 8 1324 3193 199 87 16 chrX 96914181 96914829 -69735467 - Lx7 LINE L1 -140 7556 6848 8 1324 363 188 21 105 chrX 96914829 96914924 -69735372 + B1_Mur1 SINE Alu 39 125 -24 8 1324 388 185 186 21 chrX 96914987 96915175 -69735121 + L1MCa LINE L1 1696 1914 -4594 8 1324 264 221 40 93 chrX 96915371 96915382 -69734914 + MT2B LTR ERVL 152 158 -443 8 1324 453 263 10 10 chrX 96915382 96915478 -69734818 + B1_Mur2 SINE Alu 2 97 -52 8 1324 306 0 0 0 chrX 96915494 96915528 -69734768 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 1324 288 342 58 6 chrX 96915645 96915801 -69734495 - Lx8 LINE L1 -194 7279 7116 8 1324 440 216 77 28 chrX 96915844 96916025 -69734271 + L1MCa LINE L1 2382 2571 -3750 8 1324 273 329 0 14 chrX 96916190 96916261 -69734035 - RSINE1 SINE B4 -17 148 79 8 1324 324 275 106 71 chrX 96916327 96916468 -69733828 - B4A SINE B4 -145 147 2 8 1324 4034 150 40 6 chrX 96916561 96917230 -69733066 - RLTR17 LTR ERVK 0 692 1 8 1324 322 263 0 0 chrX 96917329 96917428 -69732868 + L1MD LINE L1 4960 5058 -1088 8 1324 580 270 181 21 chrX 96917429 96917667 -69732629 + B4A SINE B4 5 280 -12 8 1324 3313 87 140 0 chrX 96917672 96918180 -69732116 - MT2B2 LTR ERVL -5 579 1 8 1324 431 92 0 38 chrX 96918181 96918260 -69732036 + (CA)n Simple_repeat Simple_repeat 1 76 0 8 1324 407 195 64 51 chrX 96918341 96918498 -69731798 + L1MD LINE L1 5147 5305 -841 8 1324 263 159 94 16 chrX 96918602 96918666 -69731630 + L1M5 LINE L1 5473 5541 -638 8 1324 3425 277 70 25 chrX 96918659 96920125 -69730171 - L1MCa LINE L1 -4966 1542 11 8 1324 815 158 7 7 chrX 96921191 96921331 -69728965 - ID_B1 SINE B4 -2 222 83 8 1324 232 422 36 15 chrX 96921645 96921782 -69728514 - Charlie17a DNA MER1_type -72 147 8 8 1324 229 276 34 17 chrX 96921791 96921850 -69728446 - ID4_ SINE ID 0 83 24 8 1324 1286 199 27 23 chrX 96922120 96922343 -69727953 - MTC LTR MaLR 0 421 198 8 1324 261 0 0 0 chrX 96922343 96922372 -69727924 + (TTTTC)n Simple_repeat Simple_repeat 1 29 0 8 1324 1052 131 0 6 chrX 96922373 96922549 -69727747 + (TTTC)n Simple_repeat Simple_repeat 2 176 0 8 1324 1286 199 27 23 chrX 96922549 96922580 -69727716 - MTC LTR MaLR -224 197 164 8 1324 6126 70 25 0 chrX 96922580 96923990 -69726306 - L1_Mus1 LINE L1 -175 6392 4938 8 1324 1111 205 0 0 chrX 96923990 96924185 -69726111 - MTC LTR MaLR -226 195 1 8 1324 1331 246 103 19 chrX 96924720 96925233 -69725063 - L1MB7 LINE L1 -61 6123 5568 8 1324 485 296 19 19 chrX 96925623 96925785 -69724511 - L2a LINE L2 -334 3092 2931 8 1324 486 293 84 87 chrX 96925815 96926214 -69724082 + MLT1A1 LTR MaLR 1 672 -8 8 1324 317 300 0 0 chrX 96926301 96926381 -69723915 + ID4 SINE ID 4 83 0 8 1324 265 304 25 0 chrX 96926391 96926470 -69723826 - L2a LINE L2 -576 2843 2763 8 1324 192 344 106 62 chrX 96926626 96927079 -69723217 + L2c LINE L2 2910 3382 -5 8 1324 741 254 44 31 chrX 96927255 96927548 -69722748 + L1M4 LINE L1 4002 4298 -1848 8 1324 447 270 51 26 chrX 96928054 96928210 -69722086 + L3 LINE CR1 1022 1181 -3308 8 1324 4803 189 36 15 chrX 96929110 96930130 -69720166 + Lx2B LINE L1 5959 7000 0 8 1324 3314 30 8 0 chrX 96930162 96930555 -69719741 - MTA_Mm LTR MaLR 0 396 1 8 1324 833 259 127 4 chrX 96931094 96931362 -69718934 + MER57F LTR ERV1 1 301 -135 8 1324 502 280 97 79 chrX 96931393 96931824 -69718472 - L2 LINE L2 -652 2767 2329 8 1324 398 250 17 0 chrX 96931896 96932012 -69718284 + L1MEd LINE L1 54 171 -5948 8 1324 255 289 0 0 chrX 96932102 96932178 -69718118 - L1M3 LINE L1 -787 5396 5321 8 1324 688 299 11 0 chrX 96932224 96932398 -69717898 - B3A SINE B2 -22 176 1 8 1324 245 167 132 77 chrX 96932399 96932490 -69717806 - L1M3 LINE L1 -816 5324 5229 8 1324 373 207 126 0 chrX 96932556 96932691 -69717605 + L1M4 LINE L1 4902 5053 -1087 8 1324 785 285 141 30 chrX 96932846 96933420 -69716876 - L1ME3A LINE L1 -4 6169 5532 8 1324 275 311 14 0 chrX 96933437 96933511 -69716785 + ID4_ SINE ID 4 78 -5 8 1324 2076 52 60 0 chrX 96933646 96933915 -69716381 - L1_Mus1 LINE L1 -4 6563 6279 8 1324 640 269 5 66 chrX 96934451 96934662 -69715634 + B3A SINE B2 1 198 0 8 1324 21 0 0 0 chrX 96934703 96934724 -69715572 + AT_rich Low_complexity Low_complexity 1 21 0 8 1324 1368 276 59 35 chrX 96934787 96935380 -69714916 - L1MD1 LINE L1 -14 6228 5622 8 1324 1454 282 33 43 chrX 96935418 96935712 -69714584 - L1MDb LINE L1 -1178 4962 4685 8 1324 1790 49 4 0 chrX 96935712 96935938 -69714358 - L1Md_F2 LINE L1 -2 6580 6354 8 1324 1454 282 33 43 chrX 96935938 96936314 -69713982 - L1MDb LINE L1 -1456 4684 4299 8 1324 298 237 3 95 chrX 96936316 96936511 -69713785 - RMER1A Other Other -888 142 38 8 1324 721 175 6 25 chrX 96936528 96936686 -69713610 - L1Md_F3 LINE L1 0 6584 6430 8 1324 442 114 12 12 chrX 96936739 96936819 -69713477 + (TTTC)n Simple_repeat Simple_repeat 1 80 0 8 1324 245 239 45 6 chrX 96936819 96936967 -69713329 - L1MDb LINE L1 -2869 3537 3366 8 1324 278 143 180 25 chrX 96937047 96937169 -69713127 - Lx9 LINE L1 -1 7643 7503 8 1324 431 228 0 169 chrX 96937206 96937407 -69712889 + Lx9 LINE L1 7248 7414 -230 8 1324 1351 231 107 13 chrX 96937448 96937830 -69712466 - Lx6 LINE L1 -7 7453 7036 8 1324 560 143 215 16 chrX 96937893 96938014 -69712282 - B1_Mm SINE Alu 0 147 3 8 1324 624 308 64 6 chrX 96938087 96938244 -69712052 + B3A SINE B2 2 167 -31 8 1324 306 260 184 104 chrX 96938244 96938407 -69711889 - B3 SINE B2 -38 178 3 8 1324 348 282 267 7 chrX 96938533 96938683 -69711613 - MER74B LTR ERVL -379 243 55 8 1324 391 183 9 135 chrX 96938692 96938907 -69711389 + RMER17C LTR ERVK 88 275 -135 8 1324 398 159 0 16 chrX 96939146 96939210 -69711086 - ID4 SINE ID -18 65 3 8 1324 1087 276 68 7 chrX 96939212 96939665 -69710631 - L1MDb LINE L1 -4989 1420 940 8 1324 327 45 0 0 chrX 96939651 96939695 -69710601 - MusHAL1 LINE L1 -2444 268 225 8 1324 2246 156 23 19 chrX 96939695 96940326 -69709970 + L1_Mur2 LINE L1 1067 1699 -4178 8 1324 445 299 70 83 chrX 96940345 96940375 -69709921 + RSINE1 SINE B4 2 23 -142 8 1324 953 138 191 0 chrX 96940375 96940564 -69709732 - URR1B DNA MER1_type 0 225 1 8 1324 445 299 70 83 chrX 96940564 96940690 -69709606 + RSINE1 SINE B4 24 156 -9 8 1324 792 258 40 0 chrX 96940739 96940987 -69709309 - L1MDb LINE L1 -5458 951 694 8 1324 425 372 57 40 chrX 96941008 96941433 -69708863 - L1MDb LINE L1 -5905 504 73 8 1324 316 286 16 32 chrX 96941462 96941585 -69708711 - L1MEb LINE L1 -5345 725 605 8 1324 258 32 0 0 chrX 96941694 96941725 -69708571 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 1324 537 16 0 0 chrX 96941725 96941786 -69708510 + (GA)n Simple_repeat Simple_repeat 1 62 0 8 1324 908 268 93 8 chrX 96941787 96942024 -69708272 - B4A SINE B4 -33 259 3 9 1324 273 343 5 124 chrX 96942486 96942679 -69707617 - L1MEb LINE L1 -5895 175 6 8 1324 483 319 75 81 chrX 96942880 96943228 -69707068 - ORR1E LTR MaLR -12 347 2 9 1324 752 199 13 20 chrX 96943250 96943399 -69706897 + B1_Mur2 SINE Alu 2 149 0 9 1324 587 224 26 26 chrX 96943720 96943871 -69706425 - MIRb SINE MIR -1 267 117 9 1324 872 298 48 17 chrX 96943948 96944238 -69706058 + MamRep605 Unknown Unknown 56 354 -522 9 1324 235 333 111 48 chrX 96944443 96944632 -69705664 + MLT1L LTR MaLR 378 578 -32 9 1324 306 214 0 37 chrX 96944976 96945083 -69705213 + GA-rich Low_complexity Low_complexity 2 104 0 9 1324 1104 133 0 0 chrX 96945085 96945265 -69705031 + (GAA)n Simple_repeat Simple_repeat 1 180 0 9 1324 508 364 170 20 chrX 96945407 96945760 -69704536 + LTR33A LTR ERVL 92 497 -23 9 1324 2842 214 27 43 chrX 96946226 96946921 -69703375 - RMER1B Other Other -9 1057 374 9 1324 221 283 0 0 chrX 96946935 96946981 -69703315 - PB1D10 SINE Alu -31 86 41 9 1324 317 292 53 38 chrX 96947016 96947049 -69703247 - ID_B1 SINE B4 -48 244 85 9 1324 374 322 116 0 chrX 96947049 96947170 -69703126 - B1F SINE Alu -11 138 4 9 1324 393 75 0 0 chrX 96948331 96948384 -69701912 + (TG)n Simple_repeat Simple_repeat 1 53 0 9 1324 296 378 62 7 chrX 96948384 96948528 -69701768 + MIRb SINE MIR 48 199 -69 9 1324 236 295 26 0 chrX 96948715 96948793 -69701503 - L1ME1 LINE L1 -62 6117 6038 9 1324 356 306 95 88 chrX 96948848 96949459 -69700837 + L2a LINE L2 2783 3420 -6 9 1324 2484 240 48 41 chrX 96949555 96950425 -69699871 + L1MB4 LINE L1 3981 4856 -1284 9 1324 269 229 43 0 chrX 96950437 96950507 -69699789 - L1M4 LINE L1 -2092 4054 3982 9 1324 205 207 83 0 chrX 96950590 96950662 -69699634 - L2c LINE L2 0 3426 3343 9 1324 383 204 133 16 chrX 96950681 96950903 -69699393 + L1MB4 LINE L1 4916 5160 -986 9 1324 286 343 10 39 chrX 96950913 96951016 -69699280 - B1F SINE Alu -46 103 4 9 1324 473 247 77 4 chrX 96951019 96951285 -69699011 + L1MB4 LINE L1 5172 5460 -711 9 1324 2140 315 23 7 chrX 96951362 96952103 -69698193 - Lx8 LINE L1 -134 7339 6587 9 1324 839 125 15 0 chrX 96952120 96952256 -69698040 - B1_Mus1 SINE Alu 0 148 11 9 1324 910 304 63 59 chrX 96952256 96952732 -69697564 - Lx8 LINE L1 -899 6574 6097 9 1324 6698 58 0 10 chrX 96952908 96953807 -69696489 - L1Md_F2 LINE L1 -13 6569 5680 9 1324 978 218 38 14 chrX 96953844 96954053 -69696243 - B3 SINE B2 0 216 3 9 1324 352 272 132 32 chrX 96954347 96954726 -69695570 - L1MC4 LINE L1 -290 7752 7336 9 1324 3283 18 39 0 chrX 96954739 96955120 -69695176 + MTA_Mm LTR MaLR 1 396 0 9 1324 9163 32 3 2 chrX 96955120 96956215 -69694081 + MTA_Mm-int LTR MaLR 1 1096 -2 9 1324 3283 18 39 0 chrX 96956217 96956598 -69693698 + MTA_Mm LTR MaLR 1 396 0 9 1324 754 256 72 0 chrX 96956705 96956928 -69693368 + L1MB4 LINE L1 5476 5714 -466 9 1324 300 127 18 0 chrX 96956931 96956986 -69693310 - RMER1C Other Other -12 1330 1275 9 1324 2132 244 103 9 chrX 96956987 96957549 -69692747 - RMER1C Other Other -221 1121 507 9 1324 328 322 136 15 chrX 96957567 96957971 -69692325 + L1MB4 LINE L1 5702 6154 -26 9 1324 1872 252 113 15 chrX 96958023 96959015 -69691281 + L1MC3 LINE L1 2269 3357 -2789 9 1324 339 198 31 20 chrX 96959137 96959235 -69691061 + L1MC3 LINE L1 3679 3777 -2369 9 1324 786 268 62 26 chrX 96959236 96959577 -69690719 + L1MC3 LINE L1 3893 4245 -1901 9 1324 24 32 0 0 chrX 96959587 96959618 -69690678 + AT_rich Low_complexity Low_complexity 1 31 0 9 1324 2859 34 2 146 chrX 96959676 96960128 -69690168 + RLTR10 LTR ERVK 1 387 -3 9 1324 7862 31 2 18 chrX 96960133 96961137 -69689159 + RLTR10-int LTR ERVK 1 988 -999 9 1324 8368 19 0 1 chrX 96961217 96962211 -69688085 + RLTR10-int LTR ERVK 992 1984 -3 9 1324 2859 34 2 146 chrX 96962213 96962665 -69687631 + RLTR10 LTR ERVK 1 387 -3 9 1324 528 239 69 5 chrX 96962671 96962873 -69687423 + L1MC3 LINE L1 4372 4586 -1560 9 1324 951 58 0 0 chrX 96962873 96962993 -69687303 - B1_Mm SINE Alu -27 120 1 9 1324 542 269 54 58 chrX 96962993 96963234 -69687062 + L1MC3 LINE L1 4575 4814 -1332 9 1324 453 292 25 96 chrX 96963270 96963497 -69686799 + L1MC3 LINE L1 5057 5270 -876 9 1324 649 187 27 61 chrX 96963497 96963645 -69686651 - B1_Mur1 SINE Alu -6 143 1 9 1324 532 284 55 41 chrX 96963645 96963956 -69686340 + L1MC3 LINE L1 5269 5582 -597 9 1324 500 192 117 12 chrX 96963984 96964164 -69686132 + Lx8 LINE L1 5144 5348 -529 9 1324 849 272 5 0 chrX 96964164 96964370 -69685926 + B3 SINE B2 2 208 -8 9 1324 325 240 35 133 chrX 96964370 96964444 -69685852 + Lx8 LINE L1 5349 5405 -472 9 1324 764 208 160 24 chrX 96964443 96964655 -69685641 + Lx5 LINE L1 6646 6886 -164 9 1324 7174 54 21 2 chrX 96964655 96965605 -69684691 - L1Md_F2 LINE L1 -12 6570 5603 9 1324 328 244 118 0 chrX 96965611 96965738 -69684558 + Lx5 LINE L1 6909 7050 0 9 1324 228 67 0 0 chrX 96965740 96965770 -69684526 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 9 1324 691 268 37 8 chrX 96965779 96966041 -69684255 + Lx8 LINE L1 5368 5672 -208 9 1324 494 271 60 11 chrX 96966154 96966406 -69683890 + Lx8 LINE L1 5664 5926 -1547 9 1324 1227 47 0 0 chrX 96966423 96966571 -69683725 + B1_Mus1 SINE Alu 1 148 0 9 1324 403 221 39 16 chrX 96966912 96967041 -69683255 - Lx9 LINE L1 0 7644 7513 9 1324 2874 298 25 32 chrX 96967054 96968009 -69682287 + Lx8 LINE L1 6263 7210 -263 9 1324 225 324 59 0 chrX 96968239 96968341 -69681955 + L1MC3 LINE L1 5585 5692 -2093 9 1324 2628 273 79 16 chrX 96968434 96969560 -69680736 + L1MC3 LINE L1 5691 6887 -898 9 1324 404 335 47 6 chrX 96969616 96969787 -69680509 + B3A SINE B2 3 180 -18 9 1324 1164 292 132 26 chrX 96970267 96970828 -69679468 + L1MC3 LINE L1 6891 7525 -260 9 1324 1961 161 112 13 chrX 96970828 96971211 -69679085 - MTC LTR MaLR 0 421 1 9 1324 1164 292 132 26 chrX 96971211 96971289 -69679007 + L1MC3 LINE L1 7526 7597 -188 9 1324 2066 179 24 42 chrX 96971289 96971739 -69678557 + RMER10A LTR ERVL 1 442 0 9 1324 1164 292 132 26 chrX 96971739 96971846 -69678450 + L1MC3 LINE L1 7598 7717 -68 9 1324 1912 115 77 16 chrX 96971846 96972156 -69678140 + ORR1A4 LTR MaLR 1 329 0 9 1324 1164 292 132 26 chrX 96972156 96972204 -69678092 + L1MC3 LINE L1 7718 7771 -14 9 1324 336 281 20 7 chrX 96972255 96972402 -69677894 - L1MD LINE L1 -698 5426 5278 9 1324 327 321 71 24 chrX 96972442 96972611 -69677685 - L1MD LINE L1 -930 5216 5040 9 1324 240 35 0 0 chrX 96972721 96972750 -69677546 + (TA)n Simple_repeat Simple_repeat 2 30 0 9 1324 332 304 90 51 chrX 96972761 96972917 -69677379 - L1M5 LINE L1 -1255 4891 4730 9 1324 28 29 0 0 chrX 96972924 96972959 -69677337 + AT_rich Low_complexity Low_complexity 1 35 0 9 1324 270 0 0 0 chrX 96973006 96973036 -69677260 + (TG)n Simple_repeat Simple_repeat 1 30 0 9 1324 466 91 13 13 chrX 96973039 96973117 -69677179 + (AGGGGG)n Simple_repeat Simple_repeat 6 83 0 9 1324 492 264 38 46 chrX 96973117 96973248 -69677048 - B3A SINE B2 -66 132 3 9 1324 312 312 0 0 chrX 96973499 96973563 -69676733 + ID4 SINE ID 20 83 0 9 1324 286 167 0 36 chrX 96973583 96973639 -69676657 + ORR1D2 LTR MaLR 1 54 -316 9 1324 231 280 0 0 chrX 96973910 96973960 -69676336 + polypyrimidine Low_complexity Low_complexity 4 53 0 9 1324 309 360 0 11 chrX 96973965 96974055 -69676241 - PB1D10 SINE Alu -24 93 5 9 1324 260 347 30 59 chrX 96973981 96974082 -69676214 - B4A SINE B4 -126 166 69 9 1324 1400 196 39 0 chrX 96974129 96974409 -69675887 + Lx8 LINE L1 6907 7197 -276 9 1324 242 331 179 11 chrX 96975085 96975271 -69675025 - L2a LINE L2 -10 3416 3191 9 1324 184 322 17 0 chrX 96975992 96976051 -69674245 + L2c LINE L2 3274 3333 -93 9 1324 3215 204 82 21 chrX 96976068 96976964 -69673332 - Lx2B LINE L1 -8 7050 6009 9 1324 2169 135 15 3 chrX 96976962 96977375 -69672921 + Lx2B LINE L1 5546 5969 -1031 9 1324 264 275 0 14 chrX 96977381 96977451 -69672845 + L2c LINE L2 3315 3383 -4 9 1324 321 269 26 9 chrX 96977488 96977604 -69672692 - L1M5 LINE L1 -1313 4833 4716 9 1324 516 348 61 0 chrX 96977647 96977828 -69672468 + MIR SINE MIR 22 213 -49 9 1324 21 0 0 0 chrX 96977844 96977865 -69672431 + AT_rich Low_complexity Low_complexity 1 21 0 9 1324 3584 181 123 42 chrX 96978312 96979102 -69671194 - RMER19B LTR ERVK -1 901 48 9 1324 316 287 9 9 chrX 96979163 96979272 -69671024 - L1M5 LINE L1 -1467 4679 4571 9 1324 22 0 0 0 chrX 96979375 96979397 -69670899 + AT_rich Low_complexity Low_complexity 1 22 0 9 1324 6553 144 49 8 chrX 96979397 96980580 -69669716 - Lx4B LINE L1 -57 7001 5770 9 1324 3824 278 48 19 chrX 96980577 96981896 -69668400 - Lx7 LINE L1 -532 7164 5807 9 1324 459 0 0 0 chrX 96981900 96981951 -69668345 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 9 1324 888 45 0 0 chrX 96981956 96982068 -69668228 - B1_Mus1 SINE Alu -1 147 36 9 1324 1885 226 30 11 chrX 96982076 96982551 -69667745 - Lx7 LINE L1 -83 5797 5314 9 1324 900 255 91 14 chrX 96982549 96982911 -69667385 + L1MB7 LINE L1 5463 5852 -332 9 1324 1389 220 142 14 chrX 96982912 96983272 -69667024 - MTD LTR MaLR -2 417 12 9 1324 499 271 8 0 chrX 96983349 96983478 -69666818 - MTD-int LTR MaLR -12 1246 1117 9 1324 7302 212 59 18 chrX 96983479 96985363 -69664933 - Lx6 LINE L1 -8 7452 5484 9 1324 12528 162 21 114 chrX 96985336 96987377 -69662919 - Lx6 LINE L1 -1638 4242 2416 9 1324 2199 155 8 11 chrX 96987377 96987743 -69662553 + Lx2A1 LINE L1 6644 7008 0 9 1324 12528 162 21 114 chrX 96987743 96988043 -69662253 - Lx6 LINE L1 -3465 2415 2120 9 1324 3958 184 66 95 chrX 96988043 96988972 -69661324 - RMER19B LTR ERVK 0 902 1 9 1324 12528 162 21 114 chrX 96988972 96989333 -69660963 - Lx6 LINE L1 -3761 2119 1762 9 1324 4090 2 0 0 chrX 96989333 96989782 -69660514 + L1Md_T LINE L1 6134 6582 0 9 1324 12528 162 21 114 chrX 96989782 96989932 -69660364 - Lx6 LINE L1 -4119 1761 1718 9 1324 1699 92 46 29 chrX 96989932 96990213 -69660083 - Lx LINE L1 -7 6647 6362 9 1324 12528 189 29 100 chrX 96990213 96991129 -69659167 - Lx6 LINE L1 -4163 1717 809 9 1324 367 321 98 6 chrX 96991128 96991463 -69658833 - Lx6 LINE L1 -7287 441 76 9 1324 392 243 14 0 chrX 96991573 96991647 -69658649 - B3A SINE B2 -123 75 1 9 1325 755 51 25 17 chrX 96993902 96994021 -69656275 - L1Md_F3 LINE L1 -1 6583 6464 9 1325 32700 52 1 41 chrX 96994021 96996275 -69654021 - L1Md_F3 LINE L1 -651 5933 3837 9 1325 2562 48 0 0 chrX 96996275 96996591 -69653705 - L1Md_T LINE L1 0 6582 6267 9 1325 32700 74 5 45 chrX 96996591 97000000 -69650296 - L1Md_F3 LINE L1 -2047 3836 513 9 1325 398 208 0 10 chrX 97000001 97000098 -69650198 - L1Md_A LINE L1 -6014 710 615 1 1325 4132 229 60 59 chrX 97000110 97001149 -69649147 - MTD-int LTR MaLR -218 1040 1 2 1325 1300 218 32 89 chrX 97001149 97001482 -69648814 - MTD LTR MaLR 0 419 106 2 1325 533 224 42 22 chrX 97001482 97001668 -69648628 + B3 SINE B2 2 194 -1 3 1325 1186 258 62 16 chrX 97001716 97002020 -69648276 - MTD LTR MaLR -14 405 88 4 1325 1807 199 18 3 chrX 97002183 97002516 -69647780 - ORR1D1 LTR MaLR -36 338 1 5 1325 921 182 0 16 chrX 97002769 97002953 -69647343 - Lx4A LINE L1 -4 7054 6874 6 1325 2410 114 11 0 chrX 97002953 97003313 -69646983 - Lx4A LINE L1 -1108 5950 5587 6 1325 1301 142 4 16 chrX 97003324 97003574 -69646722 + L1_Mur2 LINE L1 1913 2159 -3718 7 1325 2020 165 37 37 chrX 97006171 97006548 -69643748 - ORR1C1 LTR MaLR 0 378 2 8 1325 1295 119 74 5 chrX 97006582 97006784 -69643512 - ORR1A2 LTR MaLR -111 216 1 9 1325 279 71 0 0 chrX 97006875 97006917 -69643379 + (A)n Simple_repeat Simple_repeat 1 42 0 1 1325 304 284 0 13 chrX 97006921 97006996 -69643300 + B1F SINE Alu 68 141 -8 1 1325 377 369 191 11 chrX 97007075 97007730 -69642566 - L2 LINE L2 -1253 2166 1394 1 1325 1816 112 19 0 chrX 97007885 97008152 -69642144 - RLTR11A LTR ERVK 0 528 257 1 1325 748 147 13 2 chrX 97008568 97008703 -69641593 + B1_Mur3 SINE Alu 2 149 0 1 1325 475 310 37 31 chrX 97008964 97009127 -69641169 + MIR SINE MIR 24 187 -75 1 1325 345 301 51 32 chrX 97009140 97009240 -69641056 + L1MA4A LINE L1 5700 5795 -508 1 1325 216 0 0 0 chrX 97009240 97009264 -69641032 + (CCA)n Simple_repeat Simple_repeat 1 24 0 1 1325 345 301 51 32 chrX 97009264 97009379 -69640917 + L1MA4A LINE L1 5796 5918 -385 1 1325 31 76 0 0 chrX 97009506 97009572 -69640724 + AT_rich Low_complexity Low_complexity 1 66 0 1 1325 1220 302 32 19 chrX 97009789 97010163 -69640133 - L3 LINE CR1 -340 4149 3771 1 1325 397 306 14 27 chrX 97010289 97010437 -69639859 + MLT1J LTR MaLR 3 148 -364 2 1325 218 286 59 30 chrX 97010678 97010779 -69639517 - PB1D10 SINE Alu -5 112 9 2 1325 6422 37 5 0 chrX 97010779 97011532 -69638764 + L1Md_F2 LINE L1 5824 6580 -2 2 1325 206 335 104 52 chrX 97012985 97013272 -69637024 + L2 LINE L2 2558 2859 -560 2 1325 329 326 124 30 chrX 97014357 97014559 -69635737 + MIR SINE MIR 32 252 -10 2 1325 228 207 49 49 chrX 97015805 97015927 -69634369 + (CGGG)n Simple_repeat Simple_repeat 2 123 0 2 1325 337 235 35 29 chrX 97015897 97016068 -69634228 + (CGGAG)n Simple_repeat Simple_repeat 2 173 0 2 1325 36 91 0 0 chrX 97016086 97016185 -69634111 + GC_rich Low_complexity Low_complexity 1 99 0 2 1325 23 0 0 0 chrX 97016250 97016273 -69634023 + GC_rich Low_complexity Low_complexity 1 23 0 2 1325 189 0 0 0 chrX 97016460 97016481 -69633815 + (CTG)n Simple_repeat Simple_repeat 1 21 0 2 1325 23 0 0 0 chrX 97016597 97016620 -69633676 + GC_rich Low_complexity Low_complexity 1 23 0 3 1325 321 301 26 33 chrX 97019100 97019251 -69631045 + MIRc SINE MIR 77 226 -42 3 1325 248 296 70 12 chrX 97019334 97019458 -69630838 - MIR SINE MIR -112 150 18 3 1325 477 0 0 0 chrX 97020281 97020334 -69629962 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1325 235 358 106 12 chrX 97020697 97020858 -69629438 + L3 LINE CR1 4053 4228 -261 3 1325 265 308 19 37 chrX 97020863 97020971 -69629325 + MIRc SINE MIR 44 149 -119 3 1325 429 250 128 47 chrX 97023458 97023677 -69626619 - MIR SINE MIR -3 265 27 3 1325 241 234 0 21 chrX 97023901 97023949 -69626347 - Lx8 LINE L1 -248 7225 7179 3 1325 350 253 71 4 chrX 97023944 97024166 -69626130 + Lx9 LINE L1 7384 7643 -1 3 1325 851 256 51 0 chrX 97024917 97024949 -69625347 - L1MB4 LINE L1 -51 6129 6098 3 1325 3372 45 0 5 chrX 97024949 97025347 -69624949 + MTA_Mm LTR MaLR 1 396 0 4 1325 851 256 51 0 chrX 97025347 97025568 -69624728 - L1MB4 LINE L1 -83 6097 5864 3 1325 1247 222 9 141 chrX 97025615 97025895 -69624401 - L1MB4 LINE L1 -311 5869 5608 3 1325 584 204 18 0 chrX 97025895 97026008 -69624288 - PB1D10 SINE Alu -2 115 1 4 1325 1247 239 12 135 chrX 97026008 97026281 -69624015 - L1MB4 LINE L1 -577 5607 5376 3 1325 348 299 16 0 chrX 97026325 97026452 -69623844 - L1M5 LINE L1 -341 5783 5655 4 1325 304 291 126 0 chrX 97026858 97026985 -69623311 - L1M5 LINE L1 -656 5468 5326 4 1325 267 378 16 16 chrX 97027113 97027234 -69623062 - MIRb SINE MIR -40 228 108 4 1325 206 227 0 0 chrX 97027626 97027670 -69622626 - MIRc SINE MIR -160 108 65 4 1325 204 48 71 0 chrX 97028393 97028435 -69621861 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 1325 462 287 88 27 chrX 97028550 97028697 -69621599 - RSINE1 SINE B4 0 165 10 4 1325 223 315 43 21 chrX 97028763 97028857 -69621439 + MIRb SINE MIR 172 267 -1 4 1325 682 224 60 36 chrX 97028876 97029043 -69621253 + MIR SINE MIR 89 259 -3 4 1325 189 94 0 0 chrX 97029444 97029476 -69620820 + (A)n Simple_repeat Simple_repeat 1 32 0 4 1325 1236 66 12 0 chrX 97029717 97029884 -69620412 - L1Md_F2 LINE L1 -3 6579 6411 5 1325 447 276 56 71 chrX 97030380 97030789 -69619507 - HAL1 LINE L1 -143 2364 1962 5 1325 4987 107 1 16 chrX 97030904 97031644 -69618652 - L1_Mus4 LINE L1 -3 6633 5905 5 1325 259 358 30 40 chrX 97031908 97032007 -69618289 + L3 LINE CR1 3893 3990 -499 5 1325 189 217 0 21 chrX 97032061 97032108 -69618188 - L2 LINE L2 -1252 2167 2122 5 1325 210 287 162 50 chrX 97032134 97032332 -69617964 + L2c LINE L2 1917 2136 -1283 5 1325 337 236 27 9 chrX 97032332 97032429 -69617867 - ID4 SINE ID -50 102 2 5 1325 511 345 142 41 chrX 97032565 97032882 -69617414 - MLT1I LTR MaLR -2 409 61 5 1325 284 327 63 40 chrX 97032935 97032951 -69617345 + L2c LINE L2 2345 2358 -1061 5 1325 377 292 63 35 chrX 97032951 97033093 -69617203 - B1F2 SINE Alu -3 146 1 5 1325 284 327 63 40 chrX 97033093 97033251 -69617045 + L2c LINE L2 2359 2523 -896 5 1325 536 228 6 139 chrX 97033258 97033416 -69616880 + ID_B1 SINE B4 86 222 -2 5 1325 804 74 0 0 chrX 97033600 97033708 -69616588 + (TC)n Simple_repeat Simple_repeat 1 108 0 6 1325 273 301 129 0 chrX 97034079 97034172 -69616124 - PB1 SINE Alu -10 117 13 6 1325 868 146 24 18 chrX 97034240 97034408 -69615888 + Lx4A LINE L1 6889 7057 -1 6 1325 366 343 54 61 chrX 97034488 97034749 -69615547 + L2c LINE L2 2913 3171 -216 5 1325 515 276 128 43 chrX 97035025 97035282 -69615014 + L3 LINE CR1 4211 4489 0 5 1325 200 235 0 73 chrX 97035847 97035902 -69614394 + MIR SINE MIR 103 153 -55 6 1325 290 353 28 28 chrX 97036834 97036977 -69613319 + MIR3 SINE MIR 1 143 -65 6 1325 328 279 38 69 chrX 97036990 97037121 -69613175 - MER5B DNA MER1_type -6 172 46 6 1325 186 43 0 0 chrX 97038715 97038738 -69611558 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 6 1325 750 240 82 0 chrX 97038738 97038884 -69611412 - ID_B1 SINE B4 -13 211 54 6 1325 303 326 71 10 chrX 97038885 97038984 -69611312 - B4 SINE B4 -174 118 14 6 1325 303 279 0 14 chrX 97038924 97038993 -69611303 - ID4_ SINE ID -11 72 5 6 1325 457 351 99 31 chrX 97039194 97039739 -69610557 - L2b LINE L2 -58 3317 2740 7 1325 680 240 22 50 chrX 97039756 97039936 -69610360 + MER20 DNA MER1_type 17 191 -28 7 1325 363 289 41 8 chrX 97040213 97040335 -69609961 - MIRc SINE MIR -2 266 141 7 1325 248 303 13 13 chrX 97040461 97040538 -69609758 + MIR3 SINE MIR 131 207 -1 6 1325 303 264 0 0 chrX 97041407 97041479 -69608817 + (CCA)n Simple_repeat Simple_repeat 1 72 0 7 1325 324 253 119 42 chrX 97044307 97044527 -69605769 - MER102a DNA MER1_type -24 306 74 7 1325 183 235 137 0 chrX 97044804 97044855 -69605441 + MIRb SINE MIR 175 232 -36 7 1325 702 216 115 38 chrX 97045114 97045297 -69604999 + B3 SINE B2 3 199 -17 7 1325 281 293 13 0 chrX 97045556 97045631 -69604665 - L2a LINE L2 0 3426 3351 7 1325 329 292 96 62 chrX 97046053 97046199 -69604097 - MER5B DNA MER1_type -11 167 17 7 1325 783 200 73 31 chrX 97047441 97047478 -69602818 + L1_Rod LINE L1 5260 5295 -552 7 1325 348 24 0 0 chrX 97047478 97047519 -69602777 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 1325 783 200 73 31 chrX 97047519 97047672 -69602624 + L1_Rod LINE L1 5296 5457 -390 7 1325 282 312 92 84 chrX 97047847 97048204 -69602092 + L2a LINE L2 2993 3352 -74 8 1325 233 240 16 24 chrX 97049306 97049430 -69600866 + CT-rich Low_complexity Low_complexity 2 124 0 8 1325 691 42 21 0 chrX 97050146 97050241 -69600055 + (TC)n Simple_repeat Simple_repeat 2 98 0 8 1325 398 242 71 0 chrX 97050314 97050413 -69599883 + RSINE1 SINE B4 3 108 -57 8 1325 29 0 0 0 chrX 97050459 97050488 -69599808 + AT_rich Low_complexity Low_complexity 1 29 0 8 1325 323 335 81 31 chrX 97050809 97050969 -69599327 - MIRc SINE MIR -39 229 62 8 1325 657 222 48 0 chrX 97050970 97051096 -69599200 + B1F1 SINE Alu 1 132 -17 8 1325 351 179 0 0 chrX 97051171 97051238 -69599058 + GA-rich Low_complexity Low_complexity 2 68 0 8 1325 418 287 43 29 chrX 97051626 97051766 -69598530 + MIRc SINE MIR 41 182 -86 8 1325 219 88 0 0 chrX 97051858 97051892 -69598404 + (TC)n Simple_repeat Simple_repeat 1 34 0 9 1325 551 218 206 14 chrX 97051918 97052137 -69598159 - Lx7 LINE L1 -287 7409 7149 9 1325 258 132 0 0 chrX 97052137 97052175 -69598121 + MIR SINE MIR 206 243 -19 9 1325 545 42 0 14 chrX 97052475 97052548 -69597748 + (GGAA)n Simple_repeat Simple_repeat 3 74 0 9 1325 251 228 51 61 chrX 97052858 97052956 -69597340 + L1MC LINE L1 5727 5823 -2059 9 1325 224 259 23 80 chrX 97053872 97053960 -69596336 - MIRm SINE MIR -107 169 87 9 1325 402 21 0 0 chrX 97053978 97054025 -69596271 + (TCC)n Simple_repeat Simple_repeat 2 48 0 9 1325 221 349 0 23 chrX 97054434 97054522 -69595774 - L3b LINE CR1 -389 93 8 9 1325 186 43 0 0 chrX 97055359 97055382 -69594914 + (CA)n Simple_repeat Simple_repeat 1 23 0 9 1325 660 74 0 0 chrX 97055633 97055728 -69594568 + (GA)n Simple_repeat Simple_repeat 1 95 0 9 1325 1420 275 39 53 chrX 97056527 97056964 -69593332 - Lx8 LINE L1 -646 6827 6397 1 1325 685 310 9 5 chrX 97057568 97057779 -69592517 - Lx8 LINE L1 -1091 6382 6171 1 1325 866 320 23 10 chrX 97057901 97058207 -69592089 + Lx8 LINE L1 6870 7179 -294 1 1325 186 113 0 102 chrX 97058643 97058702 -69591594 + CT-rich Low_complexity Low_complexity 1 53 0 1 1325 319 187 240 0 chrX 97058730 97058805 -69591491 - B1F2 SINE Alu -56 93 1 1 1325 645 307 86 17 chrX 97058998 97059230 -69591066 + MLT1E1A LTR MaLR 9 256 -424 1 1325 233 146 59 59 chrX 97059361 97059412 -69590884 - PB1D10 SINE Alu 0 117 67 1 1325 791 234 0 0 chrX 97059368 97059509 -69590787 - ID_B1 SINE B4 -4 220 80 1 1325 661 293 33 129 chrX 97059595 97059772 -69590524 + L1MD2 LINE L1 4985 5169 -977 1 1325 490 272 24 65 chrX 97059772 97059941 -69590355 + RSINE1 SINE B4 4 165 0 1 1325 1675 279 67 52 chrX 97059941 97060426 -69589870 + L1MD2 LINE L1 5170 5632 -727 1 1325 3137 127 5 78 chrX 97060426 97060989 -69589307 - RLTR28 LTR ERVL -2 522 1 1 1325 1675 274 81 23 chrX 97060989 97061177 -69589119 + L1MD2 LINE L1 5633 5825 -534 1 1325 1189 51 0 0 chrX 97061177 97061314 -69588982 + B1_Mus1 SINE Alu 2 138 -10 1 1325 387 0 0 0 chrX 97061314 97061357 -69588939 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 1325 1675 254 400 35 chrX 97061357 97061585 -69588711 + L1MD2 LINE L1 5826 6137 -222 1 1325 2073 142 194 26 chrX 97061632 97062014 -69588282 + RLTR41 LTR ERV1 1 446 0 1 1325 2203 155 75 16 chrX 97062155 97062542 -69587754 + MTC LTR MaLR 4 413 -8 1 1325 1238 275 124 8 chrX 97062569 97062932 -69587364 + MLT1E1A LTR MaLR 276 680 0 1 1325 809 324 46 54 chrX 97063554 97063926 -69586370 - MLT1A LTR MaLR -5 369 1 1 1325 339 189 79 12 chrX 97064469 97064582 -69585714 + L1MB4 LINE L1 5786 5907 -277 1 1325 953 164 0 0 chrX 97064582 97064722 -69585574 + B1_Mur4 SINE Alu 2 141 -9 1 1325 459 73 0 0 chrX 97064722 97064790 -69585506 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 1325 356 234 25 210 chrX 97064790 97064869 -69585427 + MTC LTR MaLR 276 347 -74 1 1325 4792 138 51 8 chrX 97064869 97065629 -69584667 + Lx4B LINE L1 6261 7053 -5 1 1325 356 235 23 183 chrX 97065629 97065724 -69584572 + MTC LTR MaLR 298 407 -14 1 1325 281 289 11 32 chrX 97065745 97065838 -69584458 + L1MB4 LINE L1 6016 6106 -77 1 1325 3809 283 131 40 chrX 97065893 97067507 -69582789 + Lx8 LINE L1 5714 7473 0 1 1325 1493 286 98 0 chrX 97067528 97067968 -69582328 + MLT1E2 LTR MaLR 141 623 -4 1 1325 419 276 38 0 chrX 97069998 97070103 -69580193 - MIR3 SINE MIR -23 185 77 1 1325 356 291 395 35 chrX 97070390 97070682 -69579614 - MER47B DNA MER2_type -3 415 1 1 1325 3115 215 95 10 chrX 97071044 97071709 -69578587 + Lx9 LINE L1 6792 7476 -168 1 1325 371 73 18 0 chrX 97071709 97071764 -69578532 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 1325 3115 215 95 10 chrX 97071764 97071879 -69578417 + Lx9 LINE L1 7477 7637 -7 1 1325 230 322 75 11 chrX 97072481 97072575 -69577721 + ID_B1 SINE B4 36 135 -89 1 1325 274 370 37 9 chrX 97072582 97072691 -69577605 + B4A SINE B4 163 274 -18 1 1325 234 306 0 0 chrX 97072717 97072779 -69577517 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 1325 22 0 0 0 chrX 97072783 97072805 -69577491 + AT_rich Low_complexity Low_complexity 1 22 0 1 1325 261 316 79 0 chrX 97073081 97073157 -69577139 + ID4 SINE ID 2 83 0 1 1325 211 346 19 19 chrX 97073570 97073676 -69576620 - L2b LINE L2 -218 3157 3052 1 1325 216 86 0 0 chrX 97073676 97073711 -69576585 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1325 1024 238 0 33 chrX 97073831 97074044 -69576252 + B3 SINE B2 1 206 -10 1 1325 4355 63 0 13 chrX 97074210 97074739 -69575557 + L1_Mus1 LINE L1 6046 6567 0 1 1325 23 0 0 0 chrX 97074739 97074762 -69575534 + AT_rich Low_complexity Low_complexity 1 23 0 1 1325 911 179 272 4 chrX 97074835 97075092 -69575204 - RLTR41 LTR ERV1 -120 326 1 1 1325 339 212 0 8 chrX 97075219 97075304 -69574992 + L1M4 LINE L1 5550 5632 -552 1 1325 755 198 48 117 chrX 97075304 97075510 -69574786 - MTEa LTR MaLR -5 374 183 1 1325 709 74 18 9 chrX 97076634 97076733 -69573563 + (TTTC)n Simple_repeat Simple_repeat 3 103 0 1 1325 1277 54 7 0 chrX 97076733 97076880 -69573416 - B1_Mus1 SINE Alu 0 148 1 1 1325 709 74 18 9 chrX 97076880 97076889 -69573407 + (TTTC)n Simple_repeat Simple_repeat 2 10 0 1 1325 360 319 77 32 chrX 97077124 97077344 -69572952 + MIRc SINE MIR 34 263 -5 1 1325 456 298 44 30 chrX 97077486 97077621 -69572675 + B1F SINE Alu 12 148 -1 1 1325 184 277 21 0 chrX 97077655 97077702 -69572594 + MER5B DNA MER1_type 2 49 -129 1 1325 257 354 53 62 chrX 97077807 97077949 -69572347 + MIRb SINE MIR 32 171 -97 1 1325 549 0 0 0 chrX 97077949 97078010 -69572286 + (TC)n Simple_repeat Simple_repeat 1 61 0 1 1325 257 354 53 62 chrX 97078010 97078075 -69572221 + MIRb SINE MIR 172 237 -31 1 1325 251 301 107 80 chrX 97078906 97079242 -69571054 + RMER10A LTR ERVL 19 363 -79 1 1325 507 338 45 7 chrX 97079387 97079542 -69570754 + Tigger5 DNA MER2_type 2 162 -2244 1 1325 274 273 0 0 chrX 97079573 97079639 -69570657 - RMER30 DNA MER1_type -4 198 133 1 1325 1315 294 69 11 chrX 97079818 97080295 -69570001 - MLT1D LTR MaLR 0 505 1 1 1325 247 385 15 15 chrX 97080909 97081041 -69569255 + MIR3 SINE MIR 23 154 -54 1 1325 1656 227 19 30 chrX 97081382 97081745 -69568551 + ORR1E LTR MaLR 1 359 0 1 1325 379 382 8 0 chrX 97081822 97081953 -69568343 - L2b LINE L2 -26 3349 3218 1 1325 181 382 43 22 chrX 97082029 97082168 -69568128 - L2b LINE L2 -613 2806 2665 1 1325 27353 84 13 4 chrX 97082258 97086921 -69563375 + L1Md_F LINE L1 104 4811 -1072 1 1325 862 228 52 5 chrX 97086921 97087133 -69563163 - MTD LTR MaLR -197 222 1 1 1325 533 284 191 19 chrX 97087210 97087425 -69562871 + RMER21B LTR ERV1 316 567 -275 1 1325 329 327 111 0 chrX 97087541 97087694 -69562602 + MER117 DNA MER1_type 5 174 -23 1 1325 216 373 46 60 chrX 97089081 97089232 -69561064 - L2b LINE L2 0 3375 3227 1 1325 323 279 12 0 chrX 97089321 97089407 -69560889 - MLT1J1 LTR MaLR 0 444 358 1 1325 2365 232 101 8 chrX 97089907 97090018 -69560278 - Lx9 LINE L1 -4 7640 7478 1 1325 627 26 0 0 chrX 97090018 97090095 -69560201 + (CA)n Simple_repeat Simple_repeat 1 77 0 1 1325 2365 232 101 8 chrX 97090095 97090596 -69559700 - Lx9 LINE L1 -167 7477 6972 1 1325 468 0 0 0 chrX 97091241 97091293 -69559003 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1325 272 339 126 0 chrX 97091296 97091423 -69558873 + MIRb SINE MIR 92 234 -34 1 1325 405 0 0 0 chrX 97091494 97091539 -69558757 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 1 1325 539 272 42 84 chrX 97091665 97091984 -69558312 - ORR1E LTR MaLR -30 349 1 1 1325 294 29 0 0 chrX 97092014 97092049 -69558247 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 1325 532 291 132 61 chrX 97092521 97093432 -69556864 - HAL1b LINE L1 -68 1941 862 1 1325 294 277 32 0 chrX 97093818 97093912 -69556384 - L1MD1 LINE L1 -1 6241 6145 1 1325 2747 84 8 3 chrX 97094045 97094414 -69555882 + L1_Mur2 LINE L1 4888 5258 -619 1 1325 249 33 0 0 chrX 97094533 97094563 -69555733 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 1325 2378 156 71 18 chrX 97094868 97095306 -69554990 + RLTR12B LTR ERVK 1 461 -67 1 1325 2832 302 80 20 chrX 97095422 97095951 -69554345 - Lx8 LINE L1 -33 7440 6873 1 1325 1660 194 111 18 chrX 97095951 97096293 -69554003 + ORR1D1 LTR MaLR 1 374 0 1 1325 2832 302 80 20 chrX 97096293 97096879 -69553417 - Lx8 LINE L1 -601 6872 6258 1 1325 3039 15 89 3 chrX 97096913 97097251 -69553045 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1325 55813 21 20 14 chrX 97097251 97103688 -69546608 - IAPEz-int LTR ERVK 0 6481 8 1 1325 3174 20 42 3 chrX 97103688 97104041 -69546255 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1325 480 149 0 0 chrX 97104073 97104167 -69546129 + (TC)n Simple_repeat Simple_repeat 2 95 0 1 1325 1322 268 86 28 chrX 97104178 97104830 -69545466 - Lx8 LINE L1 -1530 6166 5475 1 1325 7182 34 3 2 chrX 97105160 97106006 -69544290 - L1Md_T LINE L1 -1 6581 5735 1 1325 26 0 0 0 chrX 97106089 97106115 -69544181 + AT_rich Low_complexity Low_complexity 1 26 0 1 1325 1377 314 120 62 chrX 97106774 97108817 -69541479 + L1MA4 LINE L1 1514 3664 -2479 1 1325 1530 214 118 41 chrX 97108817 97109194 -69541102 - MTD LTR MaLR 0 419 18 1 1325 260 0 57 0 chrX 97109194 97109229 -69541067 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 1 1325 1530 214 118 41 chrX 97109229 97109240 -69541056 - MTD LTR MaLR -402 17 1 1 1325 1377 311 137 46 chrX 97109240 97109274 -69541022 + L1MA4 LINE L1 3665 3698 -2445 1 1325 1284 171 5 5 chrX 97109276 97109493 -69540803 + URR1A DNA MER1_type 1 217 -9 1 1325 320 267 33 0 chrX 97109502 97109592 -69540704 + L1MA4 LINE L1 3693 3785 -2358 1 1325 595 267 73 9 chrX 97109618 97109837 -69540459 + L1MA4 LINE L1 5697 5929 -371 1 1325 1031 301 40 11 chrX 97110061 97110434 -69539862 + L1_Mur3 LINE L1 3742 4125 -1755 1 1325 270 250 0 14 chrX 97110452 97110525 -69539771 + GA-rich Low_complexity Low_complexity 1 72 0 1 1325 837 217 7 19 chrX 97110525 97110680 -69539616 - B3 SINE B2 -59 157 5 1 1325 353 227 266 6 chrX 97110696 97110850 -69539446 - L1MD LINE L1 -542 5817 5624 1 1325 351 283 140 28 chrX 97110852 97111030 -69539266 - HAL1b LINE L1 -1589 420 223 1 1325 234 62 0 0 chrX 97111725 97111757 -69538539 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 1325 1023 53 83 0 chrX 97111761 97111893 -69538403 - B1_Mus1 SINE Alu -5 143 1 1 1325 4540 32 0 0 chrX 97111914 97112443 -69537853 - L1Md_T LINE L1 0 6582 6054 1 1325 432 0 0 0 chrX 97112635 97112683 -69537613 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1325 220 402 0 0 chrX 97112876 97112891 -69537405 + B4A SINE B4 71 85 -207 1 1325 413 257 84 56 chrX 97112891 97112998 -69537298 + PB1D7 SINE Alu 1 110 -10 1 1325 524 311 6 18 chrX 97113074 97113241 -69537055 + RSINE1 SINE B4 1 165 0 1 1325 510 31 0 0 chrX 97114403 97114467 -69535829 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 1325 297 0 0 0 chrX 97114467 97114499 -69535797 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1325 402 327 36 12 chrX 97114850 97115017 -69535279 - MIR SINE MIR -74 188 18 1 1325 1050 108 6 17 chrX 97115051 97115230 -69535066 + (TCTCC)n Simple_repeat Simple_repeat 3 179 0 1 1325 659 99 10 0 chrX 97115232 97115333 -69534963 + (TC)n Simple_repeat Simple_repeat 2 103 0 1 1325 534 243 83 10 chrX 97115334 97115473 -69534823 - B1F1 SINE Alu -1 148 2 1 1325 473 339 0 0 chrX 97115849 97115964 -69534332 + PB1D10 SINE Alu 1 115 -2 2 1325 432 0 0 0 chrX 97116346 97116394 -69533902 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 2 1325 3609 58 11 0 chrX 97116451 97116899 -69533397 + L1_Mus1 LINE L1 6115 6567 0 2 1325 1195 48 0 13 chrX 97116902 97117051 -69533245 + B1_Mus2 SINE Alu 1 147 0 2 1325 681 297 33 23 chrX 97117094 97117308 -69532988 + LTR40a LTR ERVL 25 240 -279 2 1325 275 309 128 11 chrX 97117383 97117563 -69532733 - L2a LINE L2 -9 3417 3217 2 1325 392 167 47 150 chrX 97117720 97117847 -69532449 + MT2B LTR ERVL 152 265 -336 2 1325 702 102 105 48 chrX 97117741 97117865 -69532431 + B1_Mur3 SINE Alu 11 141 -8 2 1325 1025 268 45 54 chrX 97118157 97118488 -69531808 - ORR1E LTR MaLR -7 352 25 2 1325 199 94 31 0 chrX 97119394 97119426 -69530870 + MIRc SINE MIR 23 55 -213 2 1325 391 308 0 0 chrX 97119671 97119788 -69530508 - PB1D10 SINE Alu 0 117 1 2 1325 343 304 34 23 chrX 97119874 97120049 -69530247 - L1M5 LINE L1 -473 5700 5524 2 1325 185 345 190 0 chrX 97120069 97120185 -69530111 + MIRb SINE MIR 56 193 -75 2 1325 713 285 105 11 chrX 97120202 97120376 -69529920 + L1MB8 LINE L1 5595 5792 -386 2 1325 288 77 0 0 chrX 97120376 97120415 -69529881 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 1325 713 285 105 11 chrX 97120415 97120602 -69529694 + L1MB8 LINE L1 5793 5989 -189 2 1325 690 298 38 43 chrX 97120604 97120790 -69529506 + ID_B1 SINE B4 21 205 -19 2 1325 420 71 0 0 chrX 97120790 97120846 -69529450 + (TCC)n Simple_repeat Simple_repeat 2 57 0 2 1325 446 108 14 0 chrX 97120842 97120916 -69529380 + (TC)n Simple_repeat Simple_repeat 2 76 0 2 1325 244 315 0 0 chrX 97121168 97121241 -69529055 + (TA)n Simple_repeat Simple_repeat 2 74 0 2 1325 993 277 60 25 chrX 97121242 97121523 -69528773 - B4A SINE B4 0 292 2 2 1325 1597 307 73 35 chrX 97121578 97122429 -69527867 + L1MEc LINE L1 14 896 -5504 2 1325 330 26 0 0 chrX 97122866 97122905 -69527391 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1325 1155 284 98 29 chrX 97123255 97124293 -69526003 + L1MEc LINE L1 902 2011 -4389 2 165 866 170 0 0 chrX 97124321 97124456 -69525840 + B1_Mur3 SINE Alu 4 138 -11 2 1326 231 244 0 0 chrX 97124468 97124513 -69525783 + ID4 SINE ID 37 81 -2 2 1326 540 246 57 16 chrX 97124603 97124727 -69525569 + B3 SINE B2 1 129 -87 2 1326 303 93 0 0 chrX 97124755 97124798 -69525498 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1326 611 299 14 29 chrX 97124815 97125022 -69525274 + ID_B1 SINE B4 2 205 -19 2 1326 462 258 15 15 chrX 97125163 97125297 -69524999 + MLT2C1 LTR ERVL 3 136 -261 2 1326 405 0 0 0 chrX 97125298 97125343 -69524953 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1326 360 0 0 0 chrX 97125736 97125776 -69524520 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 1326 238 366 144 9 chrX 97125780 97126009 -69524287 + L2 LINE L2 205 464 -2955 2 1326 2718 142 8 21 chrX 97126046 97126515 -69523781 + RMER1B Other Other 594 1056 -10 2 1326 1223 141 37 133 chrX 97126524 97126795 -69523501 - ORR1B1 LTR MaLR 0 394 150 2 1326 405 268 50 7 chrX 97126964 97127103 -69523193 + L1MEc LINE L1 2165 2309 -4106 2 1326 801 40 0 0 chrX 97127103 97127203 -69523093 + B2_Mm2 SINE B2 4 103 -92 2 1326 408 321 54 23 chrX 97127203 97127592 -69522704 + L1MEc LINE L1 2294 2694 -3625 2 1326 379 223 138 0 chrX 97127599 97127693 -69522603 + PB1D10 SINE Alu 11 117 0 2 1326 2767 78 22 0 chrX 97127714 97128122 -69522174 - L1_Mur1 LINE L1 -1683 4203 3787 2 1326 5586 112 29 21 chrX 97128123 97128986 -69521310 + Lx3A LINE L1 6112 6981 0 2 1326 27407 107 21 44 chrX 97129003 97132477 -69517819 + L1Md_F2 LINE L1 153 3631 -2252 2 1326 1026 59 0 7 chrX 97132477 97132613 -69517683 + B1_Mm SINE Alu 13 147 0 2 1326 27407 107 21 44 chrX 97132613 97134564 -69515732 + L1Md_F2 LINE L1 3632 5586 -297 2 1326 8237 44 3 0 chrX 97134564 97135556 -69514740 + L1Md_F2 LINE L1 5587 6581 -1 2 1326 747 28 9 0 chrX 97135582 97135689 -69514607 + L1Md_F2 LINE L1 6474 6581 -1 2 1326 602 289 146 4 chrX 97136030 97136277 -69514019 - B4A SINE B4 -10 282 1 2 1326 435 354 0 54 chrX 97136290 97136438 -69513858 + L1MEc LINE L1 3576 3719 -2600 2 1326 591 182 151 0 chrX 97136438 97136564 -69513732 - B1_Mur1 SINE Alu -2 147 3 2 1326 435 354 0 54 chrX 97136564 97136636 -69513660 + L1MEc LINE L1 3720 3784 -2535 2 1326 495 33 0 0 chrX 97136797 97136858 -69513438 + (TC)n Simple_repeat Simple_repeat 1 61 0 2 1326 311 330 0 0 chrX 97136858 97136955 -69513341 - Lx8 LINE L1 -275 7198 7102 2 1326 1550 297 39 37 chrX 97137266 97138122 -69512174 + L1MEc LINE L1 4244 5100 -1219 2 1326 402 21 0 0 chrX 97138124 97138171 -69512125 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1326 198 0 0 0 chrX 97138171 97138192 -69512104 + (GA)n Simple_repeat Simple_repeat 1 22 0 2 1326 575 323 171 9 chrX 97138205 97138631 -69511665 + Lx9 LINE L1 6328 6822 -822 2 1326 9298 144 31 6 chrX 97138601 97138826 -69511470 + L1_Mur1 LINE L1 2366 2623 -3263 2 1326 423 0 0 0 chrX 97138826 97138873 -69511423 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 1326 9298 144 31 6 chrX 97138873 97140413 -69509883 + L1_Mur1 LINE L1 2624 4175 -1711 2 1326 4795 104 35 0 chrX 97140413 97141108 -69509188 + Lx LINE L1 5931 6649 -5 2 1326 655 328 6 41 chrX 97141108 97141386 -69508910 + Lx9 LINE L1 7140 7411 -233 2 1326 245 253 24 24 chrX 97141448 97141533 -69508763 + Lx8 LINE L1 7383 7467 -6 2 1326 302 295 16 104 chrX 97141535 97141660 -69508636 + MT2B LTR ERVL 152 265 -336 2 1326 609 261 14 7 chrX 97141551 97141694 -69508602 + B1_Mur2 SINE Alu 6 149 0 2 1326 363 220 81 29 chrX 97141700 97141803 -69508493 + Lx8 LINE L1 7330 7441 -32 2 1326 1136 177 64 201 chrX 97141803 97142241 -69508055 + ORR1C1 LTR MaLR 1 378 0 2 1326 363 220 81 29 chrX 97142241 97142273 -69508023 + Lx8 LINE L1 7442 7472 -1 2 1326 1652 184 29 47 chrX 97142306 97142674 -69507622 - ORR1B2 LTR MaLR -2 392 1 2 1326 876 161 22 27 chrX 97142702 97142887 -69507409 - Lx7 LINE L1 0 7696 7513 2 1326 1609 199 12 19 chrX 97142888 97143211 -69507085 + Lx LINE L1 6326 6646 -8 2 1326 510 61 0 0 chrX 97143211 97143277 -69507019 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 2 1326 3242 208 203 21 chrX 97143347 97144083 -69506213 - Lx6 LINE L1 -204 7256 6397 2 1326 243 0 0 0 chrX 97144083 97144110 -69506186 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 1326 3242 184 95 29 chrX 97144110 97144314 -69505982 - Lx6 LINE L1 -1064 6396 6169 2 1326 347 148 34 11 chrX 97144365 97144454 -69505842 + GA-rich Low_complexity Low_complexity 2 92 0 2 1326 1166 46 33 0 chrX 97144463 97144615 -69505681 - L1_Mus1 LINE L1 -1 6566 6410 2 1326 654 281 114 25 chrX 97144615 97144806 -69505490 - ID_B1 SINE B4 -14 210 1 2 1326 334 245 99 21 chrX 97144837 97144979 -69505317 + L1MD LINE L1 4795 4947 -1199 2 1326 231 255 115 25 chrX 97145006 97145163 -69505133 + L1MD LINE L1 4991 5161 -985 2 1326 432 283 9 9 chrX 97145187 97145294 -69505002 + PB1D10 SINE Alu 11 117 0 2 1326 327 197 168 36 chrX 97145315 97145452 -69504844 + L1MD LINE L1 5158 5312 -834 2 1326 498 279 29 22 chrX 97145452 97145591 -69504705 + B1_Mus2 SINE Alu 1 140 -7 2 1326 929 222 5 23 chrX 97145771 97145991 -69504305 - ORR1D1 LTR MaLR -158 220 1 2 1326 196 295 55 37 chrX 97146105 97146214 -69504082 - L2 LINE L2 -1061 2358 2248 2 1326 417 299 25 25 chrX 97146257 97146377 -69503919 - B1F1 SINE Alu -27 122 3 2 1326 744 124 66 0 chrX 97146794 97146915 -69503381 - B3 SINE B2 -86 130 2 2 1326 450 0 0 0 chrX 97147133 97147183 -69503113 + (GA)n Simple_repeat Simple_repeat 2 51 0 2 1326 402 235 227 34 chrX 97147340 97147516 -69502780 + B3 SINE B2 1 210 -6 2 1326 481 238 145 16 chrX 97148311 97148435 -69501861 - B1_Mur1 SINE Alu -7 142 3 2 1326 6605 204 46 27 chrX 97149085 97150627 -69499669 - Lx6 LINE L1 -299 7161 5591 2 1326 6370 178 83 83 chrX 97150627 97151767 -69498529 - L1_Mur3 LINE L1 -133 5747 4625 2 1326 234 0 0 0 chrX 97151767 97151793 -69498503 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1326 6370 178 83 83 chrX 97151793 97152601 -69497695 - L1_Mur3 LINE L1 -1256 4624 3794 2 1326 4079 78 46 0 chrX 97152601 97153143 -69497153 - RMER2 LTR ERV1 0 567 1 2 1326 6370 178 83 83 chrX 97153143 97153236 -69497060 - L1_Mur3 LINE L1 -2087 3793 3705 2 1326 762 182 13 0 chrX 97153216 97153370 -69496926 - L1_Mur3 LINE L1 -6605 1123 968 2 1326 269 0 56 0 chrX 97153370 97153406 -69496890 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 2 1326 328 229 0 98 chrX 97153409 97153612 -69496684 - RMER17C LTR ERVK -139 271 89 2 1326 1727 182 158 5 chrX 97153612 97154005 -69496291 - L1_Mur3 LINE L1 -6756 972 520 2 1326 430 280 37 0 chrX 97154114 97154221 -69496075 - PB1D10 SINE Alu -5 112 2 2 1326 326 292 0 40 chrX 97154395 97154495 -69495801 - L1M5 LINE L1 -471 5653 5558 2 1326 242 95 24 0 chrX 97154630 97154672 -69495624 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2 1326 262 22 43 43 chrX 97154789 97154836 -69495460 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 2 1326 368 256 139 8 chrX 97155233 97155355 -69494941 - Lx8 LINE L1 -556 6917 6780 2 1326 279 194 107 97 chrX 97155383 97155525 -69494771 - RSINE1 SINE B4 -154 138 2 2 1326 288 260 101 30 chrX 97155542 97155641 -69494655 - PB1D7 SINE Alu -10 110 5 2 1326 330 26 0 0 chrX 97155669 97155708 -69494588 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1326 486 0 0 0 chrX 97155708 97155761 -69494535 + (GA)n Simple_repeat Simple_repeat 1 54 0 2 1326 511 271 92 15 chrX 97156599 97156925 -69493371 + LTR37A LTR ERV1 47 425 -1 2 1326 328 267 0 13 chrX 97158440 97158516 -69491780 - ID4 SINE ID -8 75 1 2 1326 483 303 102 56 chrX 97158833 97159119 -69491177 - B4 SINE B4 0 292 3 2 1326 368 361 94 21 chrX 97159155 97159390 -69490906 + MIRb SINE MIR 9 260 -8 2 1326 450 0 0 0 chrX 97160509 97160559 -69489737 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1326 494 245 0 38 chrX 97160583 97160689 -69489607 - RSINE1 SINE B4 -61 104 3 2 1326 282 56 0 0 chrX 97160807 97160843 -69489453 + (TGG)n Simple_repeat Simple_repeat 1 36 0 2 1326 1707 244 55 0 chrX 97161281 97161390 -69488906 + MTD LTR MaLR 1 110 -309 2 1326 231 36 0 0 chrX 97161390 97161418 -69488878 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2 1326 1707 244 55 0 chrX 97161418 97161690 -69488606 + MTD LTR MaLR 111 402 -17 2 1326 343 299 71 136 chrX 97163378 97163688 -69486608 + B4A SINE B4 2 291 -1 2 1326 764 61 9 0 chrX 97163688 97163803 -69486493 + (GA)n Simple_repeat Simple_repeat 1 116 0 2 1326 310 373 16 0 chrX 97164331 97164457 -69485839 + MIRb SINE MIR 23 150 -118 3 1326 431 351 151 58 chrX 97164693 97164767 -69485529 - L2a LINE L2 0 3426 3355 3 1326 1850 134 3 118 chrX 97164767 97165139 -69485157 + ORR1A4 LTR MaLR 1 329 0 3 1326 530 345 138 61 chrX 97165139 97165474 -69484822 - L2a LINE L2 -72 3354 2970 3 1326 1300 244 46 38 chrX 97165474 97165841 -69484455 + ORR1D2 LTR MaLR 1 370 0 3 1326 530 334 115 67 chrX 97165841 97166177 -69484119 - L2a LINE L2 -450 2969 2599 3 1326 748 30 0 20 chrX 97166232 97166333 -69483963 + (TCC)n Simple_repeat Simple_repeat 2 100 0 3 1326 1371 62 0 0 chrX 97166333 97166511 -69483785 + (TTCTCC)n Simple_repeat Simple_repeat 1 178 0 3 1326 298 326 76 23 chrX 97166511 97166643 -69483653 - L2a LINE L2 -873 2546 2408 3 1326 279 0 0 0 chrX 97166882 97166913 -69483383 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1326 352 288 148 28 chrX 97166973 97167155 -69483141 + MER34A LTR ERV1 157 360 -427 3 1326 437 302 72 151 chrX 97167124 97167455 -69482841 + MER34A LTR ERV1 359 787 0 3 1326 523 311 31 87 chrX 97167997 97168055 -69482241 - MER102b DNA MER1_type -125 216 160 3 1326 279 0 0 0 chrX 97168055 97168086 -69482210 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1326 523 311 31 87 chrX 97168086 97168256 -69482040 - MER102b DNA MER1_type -182 159 1 3 1326 280 254 14 27 chrX 97168346 97168419 -69481877 + ID4_ SINE ID 2 73 -10 3 1326 450 283 0 94 chrX 97168617 97168777 -69481519 + RSINE1 SINE B4 3 147 -18 3 1326 193 137 0 56 chrX 97172701 97172755 -69477541 + CT-rich Low_complexity Low_complexity 3 53 0 3 1326 351 0 0 0 chrX 97172975 97173014 -69477282 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 1326 327 25 0 0 chrX 97173020 97173060 -69477236 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1326 228 163 0 0 chrX 97173778 97173821 -69476475 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 3 1326 253 242 61 71 chrX 97174233 97174331 -69475965 + CR1_Mam LINE CR1 1655 1751 -453 3 1326 279 0 0 0 chrX 97174355 97174386 -69475910 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1326 862 134 0 0 chrX 97175071 97175198 -69475098 + B3 SINE B2 4 130 -86 3 1326 615 328 72 26 chrX 97176299 97176907 -69473389 - L1ME3A LINE L1 0 6173 5526 3 1326 306 321 12 0 chrX 97176947 97177028 -69473268 - ID SINE ID -137 87 6 3 1326 535 250 165 12 chrX 97177265 97177435 -69472861 - B3A SINE B2 -1 197 2 3 1326 331 213 213 0 chrX 97177435 97177601 -69472695 - L1ME3A LINE L1 -863 5283 5083 3 1326 473 44 15 0 chrX 97177700 97177768 -69472528 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 1326 395 373 23 10 chrX 97177781 97178084 -69472212 - L1ME3A LINE L1 -1050 5096 4790 3 1326 517 252 44 39 chrX 97178487 97178693 -69471603 - L1ME3A LINE L1 -1367 4779 4573 3 1326 984 208 182 35 chrX 97178693 97179012 -69471284 - ORR1D1 LTR MaLR 0 374 9 3 1326 600 356 134 94 chrX 97179170 97179595 -69470701 + LTR16A LTR ERVL 1 442 -9 3 1326 241 250 24 0 chrX 97179620 97179704 -69470592 - Lx9 LINE L1 -8 7636 7551 3 1326 7821 37 7 1 chrX 97179723 97181348 -69468948 - L1Md_F2 LINE L1 -1 6581 4948 3 1326 346 222 21 43 chrX 97181369 97181399 -69468897 - L1ME3A LINE L1 -1774 4372 4341 3 1326 2453 54 3 0 chrX 97181399 97181712 -69468584 + L1Md_F2 LINE L1 6268 6581 -1 3 1326 346 222 21 43 chrX 97181712 97181822 -69468474 - L1ME3A LINE L1 -1806 4340 4236 3 1326 1956 149 20 23 chrX 97181905 97182248 -69468048 + Lx4A LINE L1 6714 7055 -3 3 1326 21 0 0 0 chrX 97182248 97182269 -69468027 + AT_rich Low_complexity Low_complexity 1 21 0 3 1326 808 259 6 65 chrX 97182269 97182608 -69467688 - Lx7 LINE L1 -389 7307 6989 3 1326 558 0 0 0 chrX 97182680 97182742 -69467554 + (GA)n Simple_repeat Simple_repeat 1 62 0 3 1326 283 176 136 10 chrX 97182742 97182845 -69467451 + Lx7 LINE L1 7605 7684 -12 3 1326 523 306 151 25 chrX 97182848 97183456 -69466840 - L1ME3A LINE L1 -1994 4152 3455 3 1326 705 249 13 1 chrX 97183457 97183684 -69466612 + L1M2 LINE L1 4381 4611 -1532 3 1326 421 270 54 0 chrX 97183684 97183795 -69466501 + PB1D10 SINE Alu 1 117 0 3 1326 664 261 13 60 chrX 97183795 97183869 -69466427 + L1M2 LINE L1 4609 4668 -1472 3 1326 249 219 47 31 chrX 97183959 97184086 -69466210 + (TATAA)n Simple_repeat Simple_repeat 1 129 0 3 1326 243 336 31 16 chrX 97184101 97184228 -69466068 - L1ME3A LINE L1 -5542 700 572 3 1326 217 327 35 80 chrX 97184490 97184603 -69465693 - MIRm SINE MIR -11 265 158 3 1326 337 379 72 45 chrX 97184544 97184876 -69465420 - L2c LINE L2 -50 3337 2997 3 1326 382 220 118 13 chrX 97184887 97185067 -69465229 + L1MB7 LINE L1 4744 4936 -1210 3 1326 745 248 62 80 chrX 97185090 97185426 -69464870 + L1MA6 LINE L1 5317 5646 -654 3 1326 1389 240 25 28 chrX 97185426 97185782 -69464514 + ORR1E LTR MaLR 1 355 -4 3 1326 745 248 62 80 chrX 97185782 97185883 -69464413 + L1MA6 LINE L1 5647 5746 -554 3 1326 248 250 21 64 chrX 97185923 97186017 -69464279 + MT2B LTR ERVL 161 250 -351 3 1326 304 224 0 15 chrX 97185970 97186038 -69464258 + PB1D10 SINE Alu 48 114 -3 3 1326 614 262 100 32 chrX 97186092 97186403 -69463893 + L1MA6 LINE L1 5818 6149 -151 3 1326 1270 246 57 16 chrX 97186405 97186773 -69463523 + Lx6 LINE L1 7053 7435 -25 3 1326 1488 268 176 24 chrX 97187025 97188004 -69462292 + L1MB7 LINE L1 4942 6062 -122 3 1326 466 236 150 0 chrX 97188459 97188586 -69461710 + MLT1A1 LTR MaLR 3 148 -260 3 1326 524 290 20 40 chrX 97188725 97188876 -69461420 - ID_B1 SINE B4 -1 223 76 3 1326 352 194 0 14 chrX 97188871 97188944 -69461352 + MLT1A1 LTR MaLR 337 408 0 3 1326 27 0 0 0 chrX 97189958 97189985 -69460311 + AT_rich Low_complexity Low_complexity 1 27 0 3 1326 405 291 51 22 chrX 97190008 97190145 -69460151 - RSINE1 SINE B4 -22 143 3 3 1326 207 357 58 35 chrX 97190422 97190596 -69459700 + L2 LINE L2 2410 2587 -832 3 1326 302 365 40 0 chrX 97191931 97192079 -69458217 - RMER15 LTR ERVL -15 560 407 3 1326 207 358 48 81 chrX 97192733 97192989 -69457307 + L2 LINE L2 1471 1723 -1696 3 1326 409 308 0 25 chrX 97192989 97193109 -69457187 - PB1D10 SINE Alu 0 117 1 3 1326 207 358 48 81 chrX 97193109 97193147 -69457149 + L2 LINE L2 1724 1755 -1664 3 1326 232 173 0 107 chrX 97193217 97193301 -69456995 + T-rich Low_complexity Low_complexity 5 79 0 3 1326 278 167 0 231 chrX 97193301 97193418 -69456878 + Lx7 LINE L1 7365 7454 -242 3 1326 6215 68 1 4 chrX 97193416 97194259 -69456037 - L1Md_F2 LINE L1 -12 6570 5730 3 1326 337 223 35 18 chrX 97194458 97194572 -69455724 - Lx7 LINE L1 -2 7694 7579 3 1326 810 216 71 13 chrX 97194658 97194883 -69455413 - Lx7 LINE L1 -289 7407 7170 3 1326 1179 236 42 61 chrX 97195043 97195518 -69454778 - L1MB7 LINE L1 -19 6165 5700 3 1326 265 296 0 0 chrX 97195583 97195637 -69454659 - ID4_ SINE ID -28 55 2 3 1326 529 259 14 7 chrX 97195647 97195795 -69454501 - L1M4 LINE L1 -517 5663 5515 3 1326 633 235 122 27 chrX 97195798 97195986 -69454310 - MTE2a LTR MaLR -2 377 172 3 1326 3735 55 0 0 chrX 97196001 97196458 -69453838 - L1_Mus2 LINE L1 0 6566 6110 3 1326 285 51 0 0 chrX 97196471 97196510 -69453786 + (T)n Simple_repeat Simple_repeat 1 39 0 3 1326 39419 4 0 0 chrX 97196526 97203078 -69447218 - L1Md_A LINE L1 0 6582 29 3 1326 714 254 48 83 chrX 97203078 97203306 -69446990 - MTE2a LTR MaLR -159 220 1 3 1326 659 253 100 0 chrX 97203307 97203571 -69446725 - L1M4 LINE L1 -661 5517 5223 3 1326 751 186 122 14 chrX 97203909 97204122 -69446174 - Lx9 LINE L1 -8 7636 7401 3 1326 326 252 14 138 chrX 97204122 97204151 -69446145 + MT2B LTR ERVL 140 151 -450 3 1326 636 191 9 26 chrX 97204151 97204264 -69446032 + B1_Mur1 SINE Alu 1 111 -38 3 1326 456 256 102 23 chrX 97204264 97204278 -69446018 + B4 SINE B4 86 222 -70 3 1326 329 187 55 27 chrX 97204416 97204526 -69445770 + A-rich Low_complexity Low_complexity 1 113 0 3 1326 321 214 24 12 chrX 97204526 97204611 -69445685 - Lx7 LINE L1 -361 7335 7250 3 1326 318 103 221 0 chrX 97204611 97204679 -69445617 - L1_Mur3 LINE L1 -723 5157 5075 3 1326 270 282 13 13 chrX 97204708 97204787 -69445509 - ID4_ SINE ID -3 80 2 3 1326 203 358 58 8 chrX 97204820 97204941 -69445355 + L2 LINE L2 2424 2550 -869 3 1326 1494 219 50 3 chrX 97205160 97205517 -69444779 + ORR1D1 LTR MaLR 1 374 0 3 1326 390 196 0 30 chrX 97206220 97206320 -69443976 + L1MA6 LINE L1 6161 6257 -43 3 1326 378 336 71 0 chrX 97206385 97206498 -69443798 + B1F SINE Alu 26 146 -3 3 1326 1824 137 98 15 chrX 97206495 97206821 -69443475 + ORR1C2 LTR MaLR 29 381 -3 3 1326 342 0 0 0 chrX 97206833 97206871 -69443425 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1326 1138 282 20 98 chrX 97206974 97207390 -69442906 + MTE2a LTR MaLR 8 370 0 3 1326 979 251 40 83 chrX 97207401 97208189 -69442107 - L1M4 LINE L1 -638 5546 4800 3 1326 282 29 0 0 chrX 97208592 97208627 -69441669 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1326 518 286 121 6 chrX 97208876 97209041 -69441255 - MIRb SINE MIR -58 210 27 3 1326 8001 8 3 0 chrX 97209289 97210227 -69440069 - L1Md_T LINE L1 0 6582 5642 3 1326 838 88 0 13 chrX 97210333 97210482 -69439814 + (TC)n Simple_repeat Simple_repeat 2 148 0 3 1326 324 0 0 0 chrX 97210482 97210517 -69439779 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1326 255 316 50 40 chrX 97210880 97210979 -69439317 + MIR SINE MIR 15 114 -154 3 1326 306 295 91 45 chrX 97210997 97211107 -69439189 - PB1D10 SINE Alu -2 115 1 3 1326 266 303 73 16 chrX 97211118 97211242 -69439054 + MIR SINE MIR 129 259 -3 3 1326 202 162 0 26 chrX 97211246 97211284 -69439012 + (TTA)n Simple_repeat Simple_repeat 3 39 0 3 1326 346 289 0 22 chrX 97211688 97211815 -69438481 - B1_Mur2 SINE Alu 0 149 1 3 1326 242 259 18 18 chrX 97211766 97211821 -69438475 - B4 SINE B4 -158 134 80 3 1326 1150 173 25 0 chrX 97212104 97212306 -69437990 + B3 SINE B2 2 208 -8 3 1326 230 345 11 22 chrX 97212530 97212619 -69437677 - L2b LINE L2 -338 3037 2950 3 1326 569 252 14 49 chrX 97212753 97212895 -69437401 + B1_Mur1 SINE Alu 1 137 -12 3 1326 216 0 0 0 chrX 97212978 97213002 -69437294 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1326 531 0 0 0 chrX 97213003 97213062 -69437234 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 1326 355 293 17 4 chrX 97213191 97213291 -69437005 + PB1D10 SINE Alu 6 107 -13 3 1326 255 237 102 0 chrX 97213299 97213358 -69436938 + ID2 SINE ID 1 65 -18 3 1326 287 357 15 38 chrX 97213473 97213604 -69436692 - B1F1 SINE Alu -21 128 1 3 1326 198 189 81 0 chrX 97213604 97213641 -69436655 - L2 LINE L2 -1405 2014 1975 3 1326 373 359 181 28 chrX 97213676 97213737 -69436559 - L2 LINE L2 -1639 1780 1717 3 1326 2113 164 70 30 chrX 97213737 97214140 -69436156 + MTC LTR MaLR 1 419 -2 3 1326 373 359 181 28 chrX 97214140 97214697 -69435599 - L2 LINE L2 -1703 1716 1067 3 1326 285 122 41 0 chrX 97215196 97215245 -69435051 + MTEa LTR MaLR 277 327 -52 3 1326 1086 256 29 0 chrX 97215370 97215612 -69434684 - MTEb LTR MaLR -116 263 15 4 1326 2296 182 95 25 chrX 97215818 97216574 -69433722 - Lx9 LINE L1 -23 7621 6813 4 1326 302 279 107 38 chrX 97217222 97217322 -69432974 - B1F1 SINE Alu -11 106 1 4 1326 256 207 30 188 chrX 97217322 97217373 -69432923 - B4 SINE B4 -208 84 50 4 1326 449 382 36 40 chrX 97217522 97217800 -69432496 - L1M2a LINE L1 -5933 1235 959 4 1326 392 344 131 0 chrX 97218223 97218383 -69431913 - L1M2a LINE L1 -6587 581 401 4 1326 981 218 0 11 chrX 97218410 97218591 -69431705 + B3 SINE B2 36 214 -2 4 1326 199 295 39 0 chrX 97219640 97219718 -69430578 - L2 LINE L2 -2523 896 816 4 1326 1152 209 0 14 chrX 97219784 97219998 -69430298 - B3 SINE B2 -5 211 1 4 1326 249 33 0 0 chrX 97220423 97220453 -69429843 + (CATA)n Simple_repeat Simple_repeat 2 31 0 4 1326 274 228 17 17 chrX 97220547 97220605 -69429691 - ID4 SINE ID -10 73 16 4 1326 585 335 106 19 chrX 97220876 97220893 -69429403 - B4A SINE B4 -4 288 274 4 1326 441 0 0 0 chrX 97220893 97220942 -69429354 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1326 585 335 106 19 chrX 97220942 97221189 -69429107 - B4A SINE B4 -19 273 1 4 1326 261 184 0 0 chrX 97221216 97221265 -69429031 - L1M5 LINE L1 -471 5653 5605 4 1326 1590 262 90 26 chrX 97221640 97222243 -69428053 - Lx7 LINE L1 -4 7692 7052 4 1326 605 330 179 53 chrX 97222475 97222832 -69427464 - L2a LINE L2 0 3426 3017 4 1326 285 29 0 0 chrX 97222832 97222866 -69427430 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 4 1326 605 318 200 23 chrX 97222866 97223282 -69427014 - L2a LINE L2 -403 3016 2521 4 1326 403 248 23 100 chrX 97223293 97223423 -69426873 - B1F SINE Alu 0 120 1 4 1326 556 303 102 8 chrX 97223848 97224084 -69426212 + MIR SINE MIR 5 262 0 4 1326 297 326 41 55 chrX 97224077 97224223 -69426073 + L2a LINE L2 3265 3408 -18 4 1326 376 349 26 112 chrX 97224299 97224602 -69425694 + L2c LINE L2 3111 3387 0 4 1326 606 300 183 33 chrX 97224893 97225373 -69424923 + Tigger15a DNA TcMar 59 610 -105 4 1326 306 98 0 0 chrX 97226615 97226666 -69423630 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 1326 267 31 0 0 chrX 97226671 97226703 -69423593 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1326 680 248 16 0 chrX 97226724 97226849 -69423447 - RSINE1 SINE B4 -35 130 4 4 1326 414 261 16 50 chrX 97226901 97227022 -69423274 + PB1D10 SINE Alu 1 117 0 4 1326 1305 197 4 12 chrX 97227148 97227389 -69422907 - ORR1B1 LTR MaLR -8 386 148 4 1326 642 256 0 30 chrX 97227355 97227488 -69422808 + B3 SINE B2 87 215 -1 4 1326 186 43 0 0 chrX 97227488 97227511 -69422785 + (TAA)n Simple_repeat Simple_repeat 2 24 0 4 1326 248 353 8 105 chrX 97227822 97227955 -69422341 - PB1D7 SINE Alu 0 120 1 4 1326 493 273 32 11 chrX 97227973 97228162 -69422134 - L1M4 LINE L1 -706 5474 5282 4 1326 621 154 0 20 chrX 97228213 97228359 -69421937 + (CCA)n Simple_repeat Simple_repeat 1 143 0 4 1326 382 305 38 0 chrX 97228359 97228464 -69421832 - PB1D10 SINE Alu -8 109 1 4 1326 1589 247 42 0 chrX 97228506 97228866 -69421430 + MTEb LTR MaLR 1 375 -4 4 1326 689 286 35 60 chrX 97229018 97229219 -69421077 - B3A SINE B2 -2 196 1 4 1326 309 229 171 0 chrX 97229388 97229458 -69420838 - B3A SINE B2 -114 84 3 4 1326 1010 219 15 0 chrX 97229484 97229685 -69420611 - B3 SINE B2 -11 205 2 4 1326 551 238 96 38 chrX 97229766 97230080 -69420216 - L1M4 LINE L1 -1439 4707 4376 4 1326 264 329 0 37 chrX 97230081 97230163 -69420133 - ID4_ SINE ID -2 81 3 4 1326 265 216 102 0 chrX 97230180 97230268 -69420028 - L1M4 LINE L1 -1780 4366 4270 4 1326 4236 225 124 14 chrX 97230287 97231254 -69419042 - RMER1A Other Other -10 1020 1 4 1326 266 227 91 10 chrX 97231279 97231409 -69418887 - L1M4 LINE L1 -1907 4239 4078 4 1326 300 27 0 0 chrX 97231426 97231463 -69418833 + (TC)n Simple_repeat Simple_repeat 1 37 0 4 1326 2767 217 55 3 chrX 97231463 97232042 -69418254 - Lx2B LINE L1 -31 6969 6361 4 1326 230 206 15 45 chrX 97232046 97232112 -69418184 - L1M4 LINE L1 -2111 4035 3972 4 1326 266 125 42 0 chrX 97232132 97232180 -69418116 - B3 SINE B2 -5 211 162 4 1326 490 257 28 0 chrX 97232217 97232326 -69417970 - PB1D10 SINE Alu -5 112 1 4 1326 1097 270 99 51 chrX 97232326 97232371 -69417925 - L1M4 LINE L1 -2203 3943 3898 4 1326 1813 146 75 121 chrX 97232371 97232596 -69417700 + ORR1B1 LTR MaLR 1 225 -169 4 1326 1165 75 0 0 chrX 97232596 97232742 -69417554 + B1_Mm SINE Alu 2 147 0 4 1326 1813 146 75 121 chrX 97232742 97232929 -69417367 + ORR1B1 LTR MaLR 226 394 0 4 1326 1097 270 99 51 chrX 97232929 97233081 -69417215 - L1M4 LINE L1 -2249 3897 3753 4 1326 388 248 43 34 chrX 97233081 97233198 -69417098 + PB1D7 SINE Alu 2 119 -1 4 1326 1097 270 99 51 chrX 97233198 97233646 -69416650 - L1M4 LINE L1 -2394 3752 3266 4 1326 34 65 0 0 chrX 97233782 97233844 -69416452 + AT_rich Low_complexity Low_complexity 1 62 0 4 1326 184 342 27 14 chrX 97234671 97234745 -69415551 + MIRc SINE MIR 78 152 -116 4 1326 352 311 60 33 chrX 97234943 97235126 -69415170 - Lx8 LINE L1 -2 7471 7284 4 1326 443 319 50 23 chrX 97235617 97235835 -69414461 - MIR SINE MIR -11 251 28 4 1326 843 308 16 31 chrX 97236060 97236445 -69413851 + L1_Mur3 LINE L1 2523 2901 -2979 4 1326 2271 256 131 19 chrX 97236449 97236530 -69413766 + Lx8 LINE L1 6415 6512 -961 4 1326 1356 98 9 5 chrX 97236530 97236745 -69413551 + L1_Mus4 LINE L1 6419 6634 -2 4 1326 2271 256 131 19 chrX 97236745 97236898 -69413398 + Lx8 LINE L1 6513 6697 -776 4 1326 1440 196 38 74 chrX 97236898 97237290 -69413006 + ORR1C1 LTR MaLR 1 378 0 4 1326 2271 256 131 19 chrX 97237290 97237803 -69412493 + Lx8 LINE L1 6698 7246 -227 4 1326 323 217 16 16 chrX 97237810 97237888 -69412408 + B1_Mur4 SINE Alu 36 143 -7 4 1326 203 0 37 0 chrX 97237889 97237916 -69412380 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 4 1326 407 324 0 10 chrX 97238047 97238150 -69412146 + B3A SINE B2 1 102 -96 4 1326 333 100 0 0 chrX 97238170 97238220 -69412076 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1326 1842 90 78 24 chrX 97238220 97238235 -69412061 + ORR1A2 LTR MaLR 9 23 -304 4 1326 3276 38 8 0 chrX 97238235 97238628 -69411668 + MTA_Mm LTR MaLR 1 396 0 4 1326 1842 90 78 24 chrX 97238628 97238907 -69411389 + ORR1A2 LTR MaLR 24 319 -8 4 1326 2887 133 76 34 chrX 97238911 97239116 -69411180 + ORR1A2-int LTR MaLR 1 219 -1744 4 1326 459 0 0 0 chrX 97239116 97239167 -69411129 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1326 2887 133 76 34 chrX 97239167 97239275 -69411021 + ORR1A2-int LTR MaLR 220 345 -1618 4 1326 474 45 0 0 chrX 97239275 97239342 -69410954 + L1Md_F3 LINE L1 6504 6570 -14 4 1326 2887 133 76 34 chrX 97239342 97239564 -69410732 + ORR1A2-int LTR MaLR 346 558 -1405 4 1326 350 222 0 0 chrX 97239557 97239620 -69410676 + MT2B LTR ERVL 157 219 -382 4 1326 411 38 0 0 chrX 97239991 97240044 -69410252 + (GA)n Simple_repeat Simple_repeat 2 54 0 4 1326 2573 263 90 16 chrX 97240044 97240083 -69410213 + L1MA5 LINE L1 4245 4276 -1867 4 1326 1146 149 118 10 chrX 97240083 97240287 -69410009 - URR1A DNA MER1_type 0 226 1 4 1326 2573 263 90 16 chrX 97240287 97241213 -69409083 + L1MA5 LINE L1 4277 5281 -862 4 1326 1851 260 12 53 chrX 97241268 97241937 -69408359 + Lx6 LINE L1 6973 7404 -56 4 1326 4760 164 38 26 chrX 97241937 97242907 -69407389 + Lx2B LINE L1 6019 7000 0 4 1326 1100 319 14 77 chrX 97242907 97242937 -69407359 + Lx6 LINE L1 7026 7050 0 4 1326 197 132 26 0 chrX 97243022 97243060 -69407236 + (TAA)n Simple_repeat Simple_repeat 1 39 0 4 1326 1142 279 29 50 chrX 97243127 97243274 -69407022 + L1MA5 LINE L1 5488 5634 -666 4 1326 2241 146 9 74 chrX 97243274 97243695 -69406601 + ORR1B1 LTR MaLR 1 394 0 4 1326 1142 279 29 50 chrX 97243695 97243989 -69406307 + L1MA5 LINE L1 5635 5920 -380 4 1326 24 53 0 0 chrX 97244026 97244064 -69406232 + AT_rich Low_complexity Low_complexity 1 38 0 4 1326 340 327 29 111 chrX 97244071 97244243 -69406053 - RSINE1 SINE B4 -6 159 2 4 1326 186 329 27 0 chrX 97244279 97244352 -69405944 - MIR3 SINE MIR -5 203 129 4 1326 267 365 39 57 chrX 97244403 97244682 -69405614 - L3 LINE CR1 -255 4234 3961 4 1326 28 29 0 0 chrX 97244961 97244996 -69405300 + AT_rich Low_complexity Low_complexity 1 35 0 4 1326 35580 66 7 6 chrX 97245001 97251174 -69399122 - L1Md_F3 LINE L1 -3 6581 415 4 1326 28 29 0 0 chrX 97251648 97251683 -69398613 + AT_rich Low_complexity Low_complexity 1 35 0 4 1326 324 253 165 0 chrX 97252386 97252477 -69397819 + PB1D10 SINE Alu 2 107 -10 4 1326 240 35 0 0 chrX 97252477 97252506 -69397790 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1326 334 331 48 42 chrX 97252548 97252737 -69397559 + MIRb SINE MIR 18 207 -61 4 1326 309 321 106 21 chrX 97253758 97253946 -69396350 - L3 LINE CR1 -6 4483 4280 4 1326 248 287 161 0 chrX 97254069 97254156 -69396140 + L2c LINE L2 3256 3356 -31 4 1326 206 275 57 14 chrX 97254234 97254304 -69395992 - L2a LINE L2 -7 3419 3347 4 1326 180 400 0 11 chrX 97254552 97254643 -69395653 - L2a LINE L2 -1 3425 3336 4 1326 228 355 156 25 chrX 97254850 97255125 -69395171 - L2a LINE L2 -124 3302 2992 4 165 7916 74 3 29 chrX 97255199 97257479 -69392817 - L1Md_F2 LINE L1 -2 6634 5327 4 1327 264 282 23 12 chrX 97257920 97258006 -69392290 + MTEa LTR MaLR 293 379 0 4 1327 255 315 33 11 chrX 97258008 97258098 -69392198 - L3 LINE CR1 -851 3638 3547 4 1327 392 173 54 54 chrX 97258327 97258431 -69391865 - L1_Rod LINE L1 -410 5473 5353 4 1327 844 166 0 22 chrX 97258483 97258662 -69391634 + GA-rich Low_complexity Low_complexity 4 178 0 4 1327 9212 217 50 47 chrX 97258690 97261586 -69388710 - L1_Rod LINE L1 -498 5349 2445 4 1327 588 143 0 0 chrX 97261587 97261685 -69388611 + (TA)n Simple_repeat Simple_repeat 2 99 0 4 1327 1440 216 31 33 chrX 97261704 97262064 -69388232 - L1_Rod LINE L1 -6514 658 300 4 1327 4932 264 61 34 chrX 97262146 97262167 -69388129 - L1_Mur3 LINE L1 -1567 4313 4294 4 1327 396 0 0 0 chrX 97262167 97262211 -69388085 + (TATG)n Simple_repeat Simple_repeat 2 45 0 4 1327 4932 264 61 34 chrX 97262211 97264252 -69386044 - L1_Mur3 LINE L1 -1587 4293 2195 4 1327 973 274 92 12 chrX 97264262 97264735 -69385561 - L1_Rod LINE L1 -4429 1418 893 4 1327 269 281 230 11 chrX 97264824 97265011 -69385285 - L1MDa LINE L1 -3591 2946 2719 4 1327 754 243 53 16 chrX 97265056 97265303 -69384993 + Lx9 LINE L1 7385 7640 -4 4 1327 279 347 73 0 chrX 97265422 97265546 -69384750 + B1F1 SINE Alu 1 133 -16 4 1327 300 250 8 39 chrX 97265584 97265713 -69384583 - L1MDa LINE L1 -4027 2606 2482 4 1327 218 156 0 22 chrX 97265885 97265931 -69384365 + (TATATG)n Simple_repeat Simple_repeat 2 46 0 4 1327 480 237 11 6 chrX 97266026 97266200 -69384096 + (TA)n Simple_repeat Simple_repeat 2 176 0 4 1327 359 193 12 0 chrX 97266231 97266314 -69383982 + (TA)n Simple_repeat Simple_repeat 1 84 0 4 1327 28 0 0 0 chrX 97266372 97266400 -69383896 + AT_rich Low_complexity Low_complexity 1 28 0 4 1327 506 343 29 0 chrX 97266436 97266576 -69383720 - RSINE1 SINE B4 -10 155 12 4 1327 1202 309 63 25 chrX 97266637 97267486 -69382810 - L1MDa LINE L1 -4548 2085 1180 4 1327 477 330 78 23 chrX 97267496 97267713 -69382583 - L1MDa LINE L1 -5958 582 354 4 1327 310 278 32 53 chrX 97267716 97267811 -69382485 + PB1D10 SINE Alu 24 116 -1 4 1327 196 313 68 38 chrX 97268191 97268324 -69381972 - L3 LINE CR1 -1572 2917 2781 4 1327 310 350 43 76 chrX 97268478 97268688 -69381608 + MIRb SINE MIR 44 246 -22 5 1327 182 195 0 47 chrX 97268767 97268810 -69381486 - L3 LINE CR1 -1996 2493 2453 4 1327 389 350 21 21 chrX 97270277 97270417 -69379879 + Lx8 LINE L1 7136 7275 -198 5 1327 429 260 20 0 chrX 97270430 97270530 -69379766 - PB1D10 SINE Alu -5 112 11 5 1327 26 50 0 0 chrX 97270834 97270874 -69379422 + AT_rich Low_complexity Low_complexity 1 40 0 5 1327 3635 209 1 3 chrX 97271305 97272011 -69378285 - Lx2B LINE L1 -13 6987 6283 5 1327 323 331 85 43 chrX 97272167 97272331 -69377965 + L1MEg LINE L1 89 259 -5825 5 1327 1117 304 76 28 chrX 97272467 97272890 -69377406 + L1MEg LINE L1 169 611 -5473 5 1327 449 277 308 18 chrX 97272890 97273166 -69377130 - MLT1A0 LTR MaLR 0 365 10 5 1327 372 223 45 57 chrX 97273166 97273323 -69376973 + L1MEg LINE L1 779 933 -5151 5 1327 212 365 103 17 chrX 97273615 97273732 -69376564 + MIRm SINE MIR 21 147 -129 5 1327 2594 184 132 15 chrX 97274054 97274704 -69375592 - Lx9 LINE L1 -20 7624 6899 5 1327 624 179 94 0 chrX 97274713 97274830 -69375466 - Lx9 LINE L1 -354 7290 7163 5 1327 2910 196 35 13 chrX 97274830 97275368 -69374928 - Lx9 LINE L1 -754 6890 6341 5 1327 1386 87 0 5 chrX 97275403 97275588 -69374708 + B2_Mm2 SINE B2 2 185 -10 5 1327 265 305 0 86 chrX 97275642 97275782 -69374514 - Lx6 LINE L1 -71 7389 7262 5 1327 1169 134 5 0 chrX 97275763 97275949 -69374347 + L1_Mur2 LINE L1 3968 4154 -1723 5 1327 207 0 0 0 chrX 97275949 97275972 -69374324 + (CCCTAA)n Simple_repeat Simple_repeat 5 27 0 5 1327 1024 188 68 19 chrX 97276029 97276235 -69374061 - URR1B DNA MER1_type -5 220 5 5 1327 251 206 122 0 chrX 97276354 97276439 -69373857 - L2a LINE L2 0 3426 3281 5 1327 180 326 44 89 chrX 97276549 97276707 -69373589 - L2c LINE L2 -290 3097 2947 5 1327 514 338 12 48 chrX 97276845 97277013 -69373283 + B4A SINE B4 1 162 -130 5 1327 381 102 0 0 chrX 97277101 97277160 -69373136 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1327 214 222 37 0 chrX 97277160 97277214 -69373082 + GA-rich Low_complexity Low_complexity 1 56 0 5 1327 28 61 0 0 chrX 97277947 97277996 -69372300 + AT_rich Low_complexity Low_complexity 1 49 0 5 1327 192 40 0 0 chrX 97278052 97278077 -69372219 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 1327 350 272 122 9 chrX 97278092 97278207 -69372089 - B4A SINE B4 -22 270 143 5 1327 6962 6 0 4 chrX 97278328 97279109 -69371187 + L1Md_T LINE L1 5805 6582 0 5 1327 321 296 153 8 chrX 97279109 97279364 -69370932 + L1MD LINE L1 3285 3576 -2570 5 1327 781 188 0 53 chrX 97279802 97279954 -69370342 + B1_Mur3 SINE Alu 1 144 -5 5 1327 477 0 0 0 chrX 97279958 97280011 -69370285 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 5 1327 496 328 139 22 chrX 97280235 97280644 -69369652 - L2a LINE L2 0 3426 2970 5 1327 486 337 80 16 chrX 97280914 97281164 -69369132 - L2a LINE L2 -1692 1727 1462 5 1327 25 0 0 0 chrX 97281803 97281828 -69368468 + AT_rich Low_complexity Low_complexity 1 25 0 5 1327 269 226 37 47 chrX 97281850 97281957 -69368339 - L1M5 LINE L1 -2201 3945 3840 5 1327 938 301 84 63 chrX 97282005 97282726 -69367570 - L1MC LINE L1 -2456 3690 2953 5 1327 277 257 14 0 chrX 97282726 97282796 -69367500 - ID4_ SINE ID -9 74 4 5 1327 938 301 84 63 chrX 97282796 97282988 -69367308 - L1MC LINE L1 -3194 2952 2758 5 1327 1159 280 92 14 chrX 97283011 97283545 -69366751 + L1MB2 LINE L1 5534 6129 -42 5 1327 1020 280 29 39 chrX 97283603 97284015 -69366281 - L1MEf LINE L1 -3389 2757 2350 5 1327 426 233 150 42 chrX 97284062 97284349 -69365947 - L1MEf LINE L1 -4053 2189 1872 5 1327 253 304 128 5 chrX 97284443 97284661 -69365635 - L1MEf LINE L1 -4477 1765 1521 5 1327 834 188 0 20 chrX 97284865 97285012 -69365284 - B1_Mus1 SINE Alu -3 145 2 5 1327 246 233 0 32 chrX 97285031 97285093 -69365203 - B1F SINE Alu -2 147 88 5 1327 759 315 76 13 chrX 97285120 97285570 -69364726 - L1MEf LINE L1 -4949 1293 816 5 1327 5366 50 32 0 chrX 97285603 97286286 -69364010 + Lx3_Mus LINE L1 6305 7009 0 5 1327 180 0 0 0 chrX 97286293 97286313 -69363983 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 1327 221 30 61 0 chrX 97286469 97286502 -69363794 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 5 1327 554 305 54 64 chrX 97286537 97286740 -69363556 - MLT1E LTR MaLR -126 527 327 5 1327 2614 38 0 0 chrX 97286744 97287063 -69363233 + L1Md_F2 LINE L1 6254 6572 -10 5 1327 22 0 0 0 chrX 97287066 97287088 -69363208 + AT_rich Low_complexity Low_complexity 1 22 0 5 1327 793 188 0 13 chrX 97287102 97287253 -69363043 + B1_Mur3 SINE Alu 1 149 0 5 1327 238 250 0 0 chrX 97287254 97287334 -69362962 + A-rich Low_complexity Low_complexity 1 80 0 5 1327 6834 71 33 21 chrX 97287449 97288219 -69362077 - L1_Mus3 LINE L1 0 6638 5860 5 1327 450 0 0 0 chrX 97288219 97288269 -69362027 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1327 252 0 0 0 chrX 97288269 97288296 -69362000 + (GA)n Simple_repeat Simple_repeat 1 28 0 5 1327 25242 141 34 5 chrX 97288296 97290245 -69360051 - L1_Mus3 LINE L1 -779 5859 3816 5 1327 522 0 0 0 chrX 97290245 97290303 -69359993 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 1327 25242 143 30 5 chrX 97290303 97293677 -69356619 - L1_Mus3 LINE L1 -2068 3815 392 5 1327 257 241 185 25 chrX 97293658 97293777 -69356519 - L1MEf LINE L1 -5931 205 68 5 1327 278 226 103 17 chrX 97293775 97293892 -69356404 - L1MEg LINE L1 -3945 2455 2329 5 1327 807 11 0 0 chrX 97294458 97294550 -69355746 + (TTC)n Simple_repeat Simple_repeat 2 93 0 5 1327 556 250 129 0 chrX 97295540 97295664 -69354632 + B3A SINE B2 11 150 -48 5 1327 288 77 0 0 chrX 97295678 97295717 -69354579 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1327 395 272 51 5 chrX 97295878 97296074 -69354222 - L1MEg LINE L1 -4085 2330 2126 5 1327 518 43 14 0 chrX 97296127 97296196 -69354100 + (TG)n Simple_repeat Simple_repeat 1 70 0 5 1327 390 283 89 32 chrX 97296239 97296637 -69353659 - L1MEg LINE L1 -4626 1789 1282 5 1327 407 235 13 0 chrX 97296904 97296991 -69353305 - ID2 SINE ID -59 93 6 5 1327 423 269 202 57 chrX 97297008 97298035 -69352261 - L1M4b LINE L1 -4473 2861 1686 5 1327 327 306 88 32 chrX 97298102 97298318 -69351978 - L1M4b LINE L1 -5719 1615 1388 5 1327 339 265 200 95 chrX 97298735 97298785 -69351511 - L1M4b LINE L1 -5929 1405 1359 5 1327 250 282 13 13 chrX 97298785 97298864 -69351432 + ID4_ SINE ID 3 81 -2 5 1327 339 265 200 95 chrX 97298864 97299213 -69351083 - L1M4b LINE L1 -5976 1358 964 5 1327 220 238 0 19 chrX 97299215 97299322 -69350974 + CT-rich Low_complexity Low_complexity 3 107 0 5 1327 392 219 55 0 chrX 97299337 97299410 -69350886 - B1F1 SINE Alu -60 89 13 5 1327 339 316 31 10 chrX 97299410 97299433 -69350863 - ID_B1 SINE B4 -57 167 70 5 1327 1035 332 79 62 chrX 97299433 97300269 -69350027 - L1M4b LINE L1 -6371 963 114 5 1327 204 67 0 0 chrX 97300383 97300413 -69349883 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 5 1327 1748 183 67 6 chrX 97300413 97300771 -69349525 - Lx5 LINE L1 -14 7036 6657 5 1327 2015 281 75 50 chrX 97300771 97301549 -69348747 - RMER13B LTR ERVK -107 801 5 5 1327 2697 159 2 2 chrX 97301560 97301981 -69348315 - Lx5 LINE L1 -388 6662 6242 5 1327 977 264 41 34 chrX 97301992 97302259 -69348037 + MTD LTR MaLR 151 419 0 5 1327 703 330 25 42 chrX 97302259 97302496 -69347800 - B4A SINE B4 -59 233 1 5 1327 415 380 88 37 chrX 97302600 97302895 -69347401 - L1MEc LINE L1 -5888 512 203 5 1327 254 331 49 8 chrX 97303091 97303213 -69347083 + MIR SINE MIR 94 220 -42 5 1327 38484 8 0 1 chrX 97303402 97309398 -69340898 + L1Md_A LINE L1 1 5586 -297 5 1327 8966 5 0 0 chrX 97309398 97310394 -69339902 + L1Md_A LINE L1 5587 6582 0 5 1327 409 284 18 18 chrX 97310741 97310852 -69339444 + PB1D10 SINE Alu 1 111 -6 5 1327 188 333 18 0 chrX 97311348 97311405 -69338891 - MIRb SINE MIR -30 238 181 5 1327 754 282 9 23 chrX 97311417 97311633 -69338663 + B3A SINE B2 1 216 0 5 1327 380 280 66 8 chrX 97311650 97311784 -69338512 - MIRb SINE MIR -99 169 18 5 1327 432 0 0 0 chrX 97313611 97313659 -69336637 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1327 472 339 169 21 chrX 97314178 97314603 -69335693 - L2 LINE L2 -338 3081 2594 5 1327 274 316 25 41 chrX 97315418 97315540 -69334756 + MIR SINE MIR 105 224 -38 5 1327 369 321 101 26 chrX 97316309 97316498 -69333798 - L3b LINE CR1 -29 453 251 5 1327 234 0 0 0 chrX 97316657 97316683 -69333613 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1327 266 250 132 57 chrX 97316866 97316972 -69333324 + PB1D10 SINE Alu 4 117 0 5 1327 1576 314 25 50 chrX 97317011 97317615 -69332681 + Lx8 LINE L1 6578 7166 -307 5 1327 237 195 0 0 chrX 97317798 97317839 -69332457 + tRNA-Gln-CAG tRNA tRNA 1 41 -34 5 1327 569 327 6 0 chrX 97317908 97318073 -69332223 + Lx8 LINE L1 7117 7282 -191 5 1327 8928 106 52 10 chrX 97319366 97320796 -69329500 - Lx3B LINE L1 -3 6970 5502 5 1327 1996 122 7 17 chrX 97320794 97321137 -69329159 + Lx3B LINE L1 5102 5466 -728 5 1327 1119 89 0 0 chrX 97322832 97322978 -69327318 + B1_Mm SINE Alu 1 146 -1 5 1327 183 146 0 0 chrX 97322980 97323021 -69327275 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 5 1327 219 36 0 0 chrX 97323167 97323195 -69327101 + (CAAAAA)n Simple_repeat Simple_repeat 4 31 0 5 1327 612 59 0 0 chrX 97323313 97323398 -69326898 + (TC)n Simple_repeat Simple_repeat 2 86 0 5 1327 324 0 0 0 chrX 97323398 97323433 -69326863 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1327 5237 167 40 24 chrX 97323433 97323568 -69326728 - Lx9 LINE L1 -177 7467 7324 5 1327 372 22 0 0 chrX 97323568 97323613 -69326683 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1327 5237 174 78 22 chrX 97323613 97324546 -69325750 - Lx9 LINE L1 -321 7323 6345 5 1327 8718 201 44 26 chrX 97324634 97326934 -69323362 - Lx9 LINE L1 -1605 6039 3656 5 1327 1609 185 19 54 chrX 97326964 97327430 -69322866 + RMER17C LTR ERVK 16 439 -519 5 1327 585 0 0 0 chrX 97327458 97327523 -69322773 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 5 1327 396 0 0 0 chrX 97327523 97327567 -69322729 + (TC)n Simple_repeat Simple_repeat 2 45 0 5 1327 291 93 0 0 chrX 97327573 97327616 -69322680 + (TCC)n Simple_repeat Simple_repeat 3 45 0 5 1327 318 152 34 0 chrX 97327618 97327677 -69322619 - B1_Mur2 SINE Alu -1 148 88 5 1327 724 201 21 129 chrX 97327694 97327980 -69322316 - Lx9 LINE L1 -2234 3613 3359 5 1327 4225 171 45 17 chrX 97327982 97329055 -69321241 - Lx9 LINE L1 -4302 1545 443 5 1327 240 329 25 12 chrX 97329048 97329128 -69321168 - L1_Rod LINE L1 -6929 243 163 5 1327 748 185 11 55 chrX 97329162 97329345 -69320951 - RLTR9D LTR ERVK -32 371 197 5 1327 574 64 0 0 chrX 97329326 97329404 -69320892 - RLTR9D LTR ERVK -337 78 1 5 1327 391 127 41 27 chrX 97329405 97329478 -69320818 - ETnERV2-int LTR ERVK -2 7404 7331 5 1327 15467 163 24 31 chrX 97329686 97332653 -69317643 - ETnERV2-int LTR ERVK -981 6425 1525 5 1327 867 218 30 44 chrX 97332743 97333192 -69317104 - ETnERV-int LTR ERVK -2804 510 3 5 1327 838 164 37 16 chrX 97333194 97333418 -69316878 - RLTR9F LTR ERVK 0 415 1 5 1327 585 267 5 46 chrX 97333418 97333614 -69316682 - L1_Rod LINE L1 -6970 202 15 5 1327 261 303 32 69 chrX 97333631 97333819 -69316477 - L1_Rod LINE L1 -6967 205 25 5 1327 211 357 99 7 chrX 97333885 97334026 -69316270 - MIRc SINE MIR -39 229 76 5 1327 226 328 63 42 chrX 97334153 97334344 -69315952 - Tigger15a DNA TcMar -235 480 286 5 1327 192 397 21 42 chrX 97334605 97334747 -69315549 - MIRb SINE MIR -52 216 78 5 1327 397 260 67 9 chrX 97334775 97334880 -69315416 - PB1D10 SINE Alu -6 111 1 5 1327 1129 272 50 4 chrX 97334910 97335172 -69315124 + B4A SINE B4 3 276 -16 6 1327 2485 180 74 18 chrX 97335628 97336171 -69314125 - RMER1B Other Other -1 1065 493 6 1327 1252 190 187 13 chrX 97336747 97337062 -69313234 - ORR1D2 LTR MaLR 0 370 1 6 1327 640 114 38 0 chrX 97338011 97338116 -69312180 + RMER1B Other Other 780 888 -178 6 1327 1812 257 45 18 chrX 97338234 97338881 -69311415 - Lx6 LINE L1 -30 7430 6455 6 1327 2600 132 18 0 chrX 97338899 97339286 -69311010 + ORR1B1 LTR MaLR 1 394 0 6 1327 488 264 7 35 chrX 97339889 97340034 -69310262 + MLT1A1 LTR MaLR 268 408 0 6 1327 1429 219 137 6 chrX 97340116 97340474 -69309822 - MTD LTR MaLR 0 419 15 6 1327 31 26 0 0 chrX 97340563 97340601 -69309695 + AT_rich Low_complexity Low_complexity 1 38 0 6 1327 249 270 27 0 chrX 97340658 97340732 -69309564 - L1MC4a LINE L1 -85 7797 7722 6 1327 1846 186 19 61 chrX 97340743 97341154 -69309142 + ORR1B1 LTR MaLR 1 394 0 6 1327 303 316 103 41 chrX 97341163 97341358 -69308938 - L1MD2 LINE L1 -234 6125 5919 6 1327 415 312 0 27 chrX 97341465 97341577 -69308719 + PB1D10 SINE Alu 9 117 0 6 1327 649 217 178 23 chrX 97341612 97341871 -69308425 - L1MD2 LINE L1 -590 5769 5471 6 1327 462 312 122 7 chrX 97341916 97342055 -69308241 - RSINE1 SINE B4 -6 159 5 6 1327 397 242 83 0 chrX 97342055 97342187 -69308109 - L1MD2 LINE L1 -767 5475 5333 6 1327 766 111 15 15 chrX 97342200 97342337 -69307959 + (TTTC)n Simple_repeat Simple_repeat 2 138 0 6 1327 1464 238 43 22 chrX 97342476 97342961 -69307335 + Lx5 LINE L1 6520 7057 -1 6 1327 657 288 60 44 chrX 97342994 97343167 -69307129 - Lx7 LINE L1 -17 7456 7290 6 1327 384 22 0 0 chrX 97343167 97343212 -69307084 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1327 657 288 60 44 chrX 97343212 97343354 -69306942 - Lx7 LINE L1 -184 7289 7136 6 1327 1029 60 0 0 chrX 97343374 97343507 -69306789 - B1_Mm SINE Alu 0 147 15 6 1327 566 235 5 90 chrX 97343507 97343573 -69306723 - ID_B1 SINE B4 0 222 41 6 1327 259 248 94 47 chrX 97343579 97343685 -69306611 - Lx7 LINE L1 -407 7066 6956 6 1327 496 273 13 67 chrX 97343686 97343835 -69306461 - B4 SINE B4 -146 146 6 6 1327 240 325 0 11 chrX 97343839 97343926 -69306370 + T-rich Low_complexity Low_complexity 4 89 0 6 1327 280 345 65 100 chrX 97344017 97344539 -69305757 - Lx8 LINE L1 -2 7471 6968 6 1327 852 297 84 54 chrX 97344591 97344738 -69305558 - Lx8 LINE L1 -850 6623 6481 6 1327 1104 209 188 53 chrX 97344738 97345057 -69305239 - ORR1D2 LTR MaLR -4 366 5 6 1327 852 307 110 39 chrX 97345057 97345398 -69304898 - Lx8 LINE L1 -1031 6613 6221 6 1327 35 0 0 0 chrX 97345402 97345437 -69304859 + AT_rich Low_complexity Low_complexity 1 35 0 6 1327 730 246 48 0 chrX 97345711 97345943 -69304353 - Lx7 LINE L1 -1800 5896 5628 6 1327 2271 166 17 0 chrX 97345939 97346356 -69303940 - L1_Mur2 LINE L1 -86 5791 5368 6 1327 276 189 95 0 chrX 97346745 97346840 -69303456 + Lx9 LINE L1 7470 7573 -71 6 1327 30 59 0 0 chrX 97347141 97347192 -69303104 + AT_rich Low_complexity Low_complexity 1 51 0 6 1327 252 0 0 0 chrX 97347315 97347343 -69302953 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1327 456 333 31 31 chrX 97347355 97347516 -69302780 - RSINE1 SINE B4 -4 161 1 6 1327 28 0 0 0 chrX 97347525 97347553 -69302743 + AT_rich Low_complexity Low_complexity 1 28 0 6 1327 1444 201 27 40 chrX 97347554 97348133 -69302163 - Lx4B LINE L1 -707 6351 5831 6 1327 2603 146 41 21 chrX 97348130 97348613 -69301683 + Lx2B LINE L1 6356 6848 -152 6 1327 360 290 18 53 chrX 97348884 97348997 -69301299 + PB1D10 SINE Alu 9 117 0 6 1327 1475 218 78 0 chrX 97349789 97350082 -69300214 + MTD LTR MaLR 3 318 -101 6 1327 207 0 0 0 chrX 97350097 97350120 -69300176 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1327 2211 81 7 0 chrX 97350546 97350844 -69299452 + L1_Mus3 LINE L1 6339 6638 0 6 1327 332 263 64 6 chrX 97350874 97351039 -69299257 + L1MB5 LINE L1 5343 5524 -656 6 1327 1595 231 38 19 chrX 97351134 97351501 -69298795 - ORR1D1 LTR MaLR 0 374 1 6 1327 1108 261 69 21 chrX 97351541 97351920 -69298376 + L1MB5 LINE L1 5683 6079 -95 6 1327 261 233 27 0 chrX 97352388 97352461 -69297835 + L1MB5 LINE L1 6100 6174 0 6 1327 367 157 0 79 chrX 97352682 97352758 -69297538 + HAL1-2a_MD LINE L1 2345 2414 -610 6 1327 386 252 45 64 chrX 97352764 97352874 -69297422 - PB1D9 SINE Alu -7 113 6 6 1327 402 115 0 0 chrX 97352920 97352981 -69297315 + (CA)n Simple_repeat Simple_repeat 1 61 0 6 1327 736 323 21 51 chrX 97353151 97353386 -69296910 + B4 SINE B4 50 277 -15 6 1327 562 179 45 0 chrX 97353429 97353541 -69296755 - L1M4 LINE L1 -464 5714 5598 6 1327 272 359 34 8 chrX 97353617 97353735 -69296561 + Cheshire DNA MER1_type 167 287 -2133 6 1327 312 228 25 12 chrX 97354905 97354985 -69295311 + Lx9 LINE L1 5812 5892 -1752 6 1327 714 98 16 8 chrX 97355021 97355144 -69295152 + (GA)n Simple_repeat Simple_repeat 1 124 0 6 1327 1215 54 0 0 chrX 97355608 97355755 -69294541 + B1_Mus2 SINE Alu 1 147 0 6 1327 701 228 90 139 chrX 97356651 97356916 -69293380 + RMER1C Other Other 11 240 -1102 6 1327 210 37 0 0 chrX 97356916 97356943 -69293353 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 6 1327 701 228 90 139 chrX 97356943 97356978 -69293318 + RMER1C Other Other 241 295 -1047 6 1327 1095 308 41 25 chrX 97357292 97357879 -69292417 + RMER1C Other Other 406 857 -485 6 1327 7406 68 1 9 chrX 97357909 97359211 -69291085 - L1_Mus2 LINE L1 0 6566 5275 6 1327 3328 92 35 0 chrX 97359211 97359670 -69290626 + L1_Mus1 LINE L1 6093 6567 0 6 1327 14709 146 119 3 chrX 97359671 97362152 -69288144 - L1_Mus2 LINE L1 -1296 4587 2058 6 1327 441 0 0 0 chrX 97362152 97362201 -69288095 + (TA)n Simple_repeat Simple_repeat 2 50 0 6 1327 14709 171 70 8 chrX 97362201 97363441 -69286855 - L1_Mus2 LINE L1 -3826 2057 499 6 1327 275 335 61 121 chrX 97363745 97364108 -69286188 - ORR1E LTR MaLR 0 359 19 6 1327 347 348 95 46 chrX 97364246 97364508 -69285788 - MLT1L LTR MaLR -2 608 334 6 1327 1254 306 80 41 chrX 97364518 97365005 -69285291 - MER68 LTR ERVL -57 506 1 6 1327 231 322 0 75 chrX 97365499 97365593 -69284703 - L2 LINE L2 -498 2921 2835 6 1327 189 286 0 0 chrX 97366077 97366126 -69284170 - L2 LINE L2 -1000 2419 2371 6 1327 39571 7 0 1 chrX 97366184 97373162 -69277134 - L1Md_A LINE L1 0 6582 1 6 1327 22 56 0 0 chrX 97374033 97374069 -69276227 + AT_rich Low_complexity Low_complexity 1 36 0 6 1327 9367 162 34 12 chrX 97374078 97375871 -69274425 - Lx2B LINE L1 -20 6980 5129 6 1327 671 127 165 8 chrX 97375871 97375998 -69274298 + B1_Mus1 SINE Alu 2 148 0 6 1327 9367 149 41 9 chrX 97375998 97377197 -69273099 - Lx2B LINE L1 -749 5137 3713 6 1327 21 0 0 0 chrX 97377296 97377317 -69272979 + AT_rich Low_complexity Low_complexity 1 21 0 6 1327 5701 51 1 1 chrX 97377333 97378039 -69272257 - L1_Mus2 LINE L1 -8 6558 5853 6 1327 1097 88 0 0 chrX 97378049 97378196 -69272100 - B1_Mus1 SINE Alu 0 148 2 6 1327 5211 77 1 4 chrX 97378202 97378928 -69271368 - L1_Mm LINE L1 -14 5869 5146 6 1327 324 275 132 54 chrX 97379278 97379536 -69270760 + L1M5 LINE L1 5024 5301 -845 6 1327 251 265 12 12 chrX 97379715 97379799 -69270497 + L1M5 LINE L1 5520 5603 -576 6 1327 546 227 40 30 chrX 97379850 97380050 -69270246 + L1M2 LINE L1 2977 3178 -2965 6 1327 1131 184 9 26 chrX 97380182 97380411 -69269885 - URR1A DNA MER1_type 0 226 2 6 1327 341 391 31 12 chrX 97380860 97381116 -69269180 + L3b LINE CR1 120 380 -102 6 1327 21 36 0 0 chrX 97381428 97381456 -69268840 + AT_rich Low_complexity Low_complexity 1 28 0 6 1327 992 51 14 0 chrX 97381879 97382017 -69268279 + (TAGA)n Simple_repeat Simple_repeat 2 141 0 6 1327 471 35 0 0 chrX 97382191 97382248 -69268048 + (TC)n Simple_repeat Simple_repeat 1 57 0 6 1327 381 102 0 0 chrX 97382254 97382313 -69267983 + (TG)n Simple_repeat Simple_repeat 1 59 0 6 1327 339 25 0 0 chrX 97382313 97382352 -69267944 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 1327 417 263 141 94 chrX 97383306 97383562 -69266734 + B4 SINE B4 3 270 -22 6 1327 215 200 0 0 chrX 97383562 97383597 -69266699 + polypyrimidine Low_complexity Low_complexity 2 36 0 6 1327 531 0 0 0 chrX 97383606 97383665 -69266631 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1327 8387 77 47 0 chrX 97383971 97385133 -69265163 - Lx3_Mus LINE L1 -8 7001 5785 6 1327 184 256 23 0 chrX 97385846 97385889 -69264407 + L4 LINE RTE 1817 1860 -169 6 1327 393 337 203 10 chrX 97385928 97386228 -69264068 - MER77 LTR ERVL -75 532 175 6 1327 239 323 119 31 chrX 97386100 97386260 -69264036 - MER21B LTR ERV1 -551 312 139 6 165 1106 317 78 34 chrX 97386267 97386976 -69263320 - LTR52-int LTR ERVL -3757 1928 1189 6 1328 242 336 58 0 chrX 97387064 97387100 -69263196 - ID_B1 SINE B4 -105 119 10 6 1328 323 235 29 0 chrX 97387100 97387168 -69263128 - ID4_ SINE ID -4 79 10 6 1328 21 36 0 0 chrX 97387184 97387212 -69263084 + AT_rich Low_complexity Low_complexity 1 28 0 6 1328 468 276 32 13 chrX 97387216 97387374 -69262922 - LTR52-int LTR ERVL -2597 959 799 6 1328 466 219 25 66 chrX 97387471 97387593 -69262703 - PB1 SINE Alu 0 127 11 6 1328 1109 319 52 17 chrX 97387716 97388176 -69262120 - LTR52-int LTR ERVL -2943 613 138 6 1328 1654 105 82 4 chrX 97388570 97388837 -69261459 + Lx LINE L1 6262 6549 -105 6 1328 315 71 0 0 chrX 97388838 97388880 -69261416 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 6 1328 241 167 147 29 chrX 97389089 97389157 -69261139 - LTR52 LTR ERVL -343 78 3 6 1328 180 269 77 0 chrX 97389483 97389535 -69260761 + MIRc SINE MIR 81 136 -132 6 1328 25 0 0 0 chrX 97389992 97390017 -69260279 + AT_rich Low_complexity Low_complexity 1 25 0 6 1328 314 352 76 29 chrX 97390319 97390594 -69259702 + L2c LINE L2 3090 3377 -10 6 1328 539 29 14 0 chrX 97391423 97391492 -69258804 + (GA)n Simple_repeat Simple_repeat 2 71 0 6 1328 3978 118 17 30 chrX 97391552 97392210 -69258086 - Lx2 LINE L1 -554 6443 5795 6 1328 802 188 0 0 chrX 97392205 97392354 -69257942 + Lx2 LINE L1 6761 6909 -88 6 1328 630 108 0 22 chrX 97392354 97392473 -69257823 + B1_Mm SINE Alu 40 149 0 6 1328 419 82 0 14 chrX 97392473 97392547 -69257749 + (CAAAA)n Simple_repeat Simple_repeat 2 74 0 6 1328 753 247 99 33 chrX 97392695 97392765 -69257531 - B4 SINE B4 -2 290 219 6 1328 246 32 0 0 chrX 97392765 97392796 -69257500 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 1328 753 247 99 33 chrX 97392796 97392997 -69257299 - B4 SINE B4 -74 218 2 6 1328 271 387 98 11 chrX 97393827 97394101 -69256195 + L2a LINE L2 3129 3426 0 6 1328 534 95 32 0 chrX 97395487 97395582 -69254714 + (GA)n Simple_repeat Simple_repeat 1 98 0 7 1328 279 261 82 57 chrX 97395584 97395706 -69254590 - RSINE1 SINE B4 -38 127 3 7 1328 766 201 14 0 chrX 97395978 97396117 -69254179 - B1_Mur2 SINE Alu -8 141 1 7 1328 569 298 22 6 chrX 97396360 97396539 -69253757 + B3A SINE B2 1 182 -16 7 1328 300 225 25 0 chrX 97396539 97396619 -69253677 + (CAGA)n Simple_repeat Simple_repeat 3 84 0 7 1328 23 33 0 0 chrX 97396619 97396649 -69253647 + AT_rich Low_complexity Low_complexity 1 30 0 7 1328 189 0 0 0 chrX 97396815 97396836 -69253460 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 7 1328 310 366 35 18 chrX 97397009 97397123 -69253173 - Helitron3Na_Mam RC Helitron -57 429 314 7 1328 705 135 0 0 chrX 97397331 97397457 -69252839 + (TTCC)n Simple_repeat Simple_repeat 3 128 0 7 1328 1745 249 85 37 chrX 97397483 97397989 -69252307 - Lx9 LINE L1 -13 7631 7098 7 1328 1215 129 124 0 chrX 97397989 97398190 -69252106 + URR1A DNA MER1_type 1 226 0 7 1328 1745 249 85 37 chrX 97398190 97398224 -69252072 - Lx9 LINE L1 -547 7097 7065 7 1328 327 65 0 0 chrX 97399344 97399390 -69250906 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 7 1328 277 275 24 24 chrX 97399861 97399943 -69250353 + ID4_ SINE ID 1 82 -1 7 1328 390 331 17 0 chrX 97400259 97400440 -69249856 + L1M2 LINE L1 2365 2548 -4301 7 1328 681 297 92 74 chrX 97400719 97401838 -69248458 + L1M2 LINE L1 2157 3348 -3201 7 1328 493 219 96 14 chrX 97401876 97402022 -69248274 - MTD LTR MaLR -1 418 237 7 1328 3387 196 93 68 chrX 97402026 97402960 -69247336 + MERVL_2A-int LTR ERVL 4778 5735 -26 7 1328 383 74 37 0 chrX 97402970 97403024 -69247272 + PB1D9 SINE Alu 9 64 -56 7 1328 2244 57 69 6 chrX 97403037 97403371 -69246925 - L1_Mus3 LINE L1 -5 6633 6279 7 1328 474 18 0 0 chrX 97403396 97403451 -69246845 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 1328 1351 237 16 32 chrX 97403487 97403801 -69246495 + MT2A LTR ERVL 1 309 -224 7 1328 1299 315 56 9 chrX 97403878 97404651 -69245645 + L1M2 LINE L1 3434 4242 -2603 7 1328 392 249 31 124 chrX 97404650 97404669 -69245627 - Lx4B LINE L1 -1 7057 7042 7 1328 294 95 0 0 chrX 97404669 97404711 -69245585 + (TTG)n Simple_repeat Simple_repeat 2 43 0 7 1328 440 249 31 124 chrX 97404711 97404884 -69245412 - Lx4B LINE L1 -17 7041 6883 7 1328 2316 170 51 25 chrX 97404859 97405331 -69244965 - Lx2B LINE L1 -218 6782 6299 7 1328 24 32 0 0 chrX 97405339 97405370 -69244926 + AT_rich Low_complexity Low_complexity 1 31 0 7 1328 186 43 0 0 chrX 97405381 97405404 -69244892 + (TGG)n Simple_repeat Simple_repeat 1 23 0 7 1328 468 0 0 0 chrX 97405404 97405456 -69244840 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 1328 408 328 0 69 chrX 97405486 97405617 -69244679 - RSINE1 SINE B4 0 165 44 7 1328 2256 141 53 20 chrX 97406610 97407009 -69243287 - MTC LTR MaLR -8 413 2 7 1328 466 183 48 0 chrX 97407703 97407807 -69242489 - Lx9 LINE L1 -2 7642 7534 7 1328 186 43 0 0 chrX 97407824 97407847 -69242449 + (TTG)n Simple_repeat Simple_repeat 2 24 0 7 1328 761 288 56 39 chrX 97408033 97408318 -69241978 + B4A SINE B4 3 292 0 7 1328 21 57 0 0 chrX 97408544 97408579 -69241717 + AT_rich Low_complexity Low_complexity 1 35 0 7 1328 1439 211 111 6 chrX 97408753 97409087 -69241209 - ORR1D1 LTR MaLR -5 369 1 7 1328 1104 238 75 26 chrX 97409153 97409502 -69240794 - L1M5 LINE L1 -414 5750 5385 7 1328 351 356 57 31 chrX 97409679 97409721 -69240575 - Lx8 LINE L1 -119 7354 7311 7 1328 264 30 0 0 chrX 97409721 97409754 -69240542 + (TTG)n Simple_repeat Simple_repeat 2 34 0 7 1328 351 356 57 31 chrX 97409754 97409905 -69240391 - Lx8 LINE L1 -163 7310 7157 7 1328 704 246 54 29 chrX 97409925 97410251 -69240045 + L1MA5 LINE L1 5949 6289 -11 7 1328 321 395 0 16 chrX 97410275 97410401 -69239895 - Charlie18a DNA MER1_type -218 124 1 7 1328 344 40 0 20 chrX 97410412 97410463 -69239833 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 7 1328 520 187 9 18 chrX 97411288 97411397 -69238899 + ID_B1 SINE B4 117 224 0 7 1328 381 283 28 0 chrX 97411591 97411697 -69238599 - PB1D10 SINE Alu -8 109 1 7 1328 5962 101 22 42 chrX 97411927 97412888 -69237408 - Lx LINE L1 -7 6647 5706 7 1328 462 193 247 26 chrX 97412883 97413037 -69237259 + Lx8 LINE L1 7257 7444 -29 7 1328 11232 149 6 5 chrX 97413098 97414964 -69235332 - L1_Mm LINE L1 -162 5721 3854 7 1328 32 0 0 0 chrX 97416364 97416396 -69233900 + AT_rich Low_complexity Low_complexity 1 32 0 7 1328 982 315 81 12 chrX 97417006 97417433 -69232863 - MLT1F1 LTR MaLR -76 484 1 7 1328 536 248 0 0 chrX 97418189 97418306 -69231990 + PB1D10 SINE Alu 1 117 0 7 1328 26 50 0 0 chrX 97418469 97418509 -69231787 + AT_rich Low_complexity Low_complexity 1 40 0 7 1328 1299 253 10 19 chrX 97418569 97418879 -69231417 + Lx7 LINE L1 6880 7186 -510 7 1328 745 289 80 17 chrX 97419002 97419417 -69230879 - L1ME1 LINE L1 -14 6165 5725 7 1328 360 0 0 0 chrX 97419423 97419463 -69230833 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1328 364 269 76 8 chrX 97419525 97419655 -69230641 - B4 SINE B4 -105 187 1 7 1328 615 314 29 8 chrX 97419657 97419898 -69230398 - L1ME1 LINE L1 -439 5740 5495 7 1328 417 269 74 0 chrX 97420187 97420295 -69230001 - PB1D7 SINE Alu -4 116 1 7 1328 639 22 22 11 chrX 97420378 97420468 -69229828 + (TG)n Simple_repeat Simple_repeat 1 91 0 7 1328 1000 279 22 40 chrX 97420484 97420757 -69229539 - B4 SINE B4 -22 270 3 7 1328 288 0 0 0 chrX 97420952 97420984 -69229312 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 1328 492 32 0 0 chrX 97421007 97421069 -69229227 + (GA)n Simple_repeat Simple_repeat 1 62 0 7 1328 966 138 131 15 chrX 97421780 97421979 -69228317 - URR1B DNA MER1_type -3 222 1 7 1328 271 79 0 0 chrX 97422153 97422191 -69228105 - L1_Mus2 LINE L1 -389 6177 6140 7 1328 698 0 12 0 chrX 97422194 97422276 -69228020 + (TTC)n Simple_repeat Simple_repeat 3 85 0 7 1328 348 24 0 0 chrX 97422276 97422317 -69227979 + (TC)n Simple_repeat Simple_repeat 1 41 0 7 1328 855 116 0 80 chrX 97422317 97422467 -69227829 - B1_Mus2 SINE Alu -8 139 2 7 1328 5102 81 3 1 chrX 97422479 97423157 -69227139 - L1_Mus3 LINE L1 -12 6626 5948 7 1328 180 259 17 33 chrX 97423697 97423757 -69226539 + L3 LINE CR1 2085 2143 -2346 7 1328 299 247 55 0 chrX 97424935 97425008 -69225288 - B1F SINE Alu -20 129 53 7 1328 183 139 0 0 chrX 97425070 97425106 -69225190 + (GA)n Simple_repeat Simple_repeat 1 36 0 7 1328 677 281 29 0 chrX 97425122 97425261 -69225035 - RSINE1 SINE B4 -22 143 1 7 1328 513 0 0 0 chrX 97425673 97425730 -69224566 + (TC)n Simple_repeat Simple_repeat 2 58 0 7 1328 315 0 0 0 chrX 97425730 97425764 -69224532 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1328 426 39 0 0 chrX 97426398 97426450 -69223846 + (TTTTC)n Simple_repeat Simple_repeat 3 54 0 7 1328 2466 321 90 22 chrX 97427114 97428213 -69222083 - Lx8 LINE L1 -8 7465 6292 7 1328 677 332 53 7 chrX 97428492 97428774 -69221522 - L1MD2 LINE L1 -6231 316 22 7 1328 339 326 86 38 chrX 97428873 97429317 -69220979 - L1MEf LINE L1 -4585 1615 1151 7 1328 316 329 42 21 chrX 97429337 97429480 -69220816 - L1MEf LINE L1 -4982 1112 967 7 1328 961 180 164 45 chrX 97429509 97429821 -69220475 - ORR1A3 LTR MaLR -4 370 1 7 1328 827 227 28 0 chrX 97429828 97430004 -69220292 - ORR1E-int LTR MaLR -1399 181 1 7 1328 875 266 37 102 chrX 97430009 97430390 -69219906 - ORR1E LTR MaLR -3 356 1 7 1328 360 0 0 0 chrX 97430525 97430565 -69219731 + (TC)n Simple_repeat Simple_repeat 1 40 0 7 1328 973 286 51 44 chrX 97430671 97431307 -69218989 + Lx7 LINE L1 4789 5489 -811 7 1328 461 259 158 14 chrX 97431501 97431713 -69218583 + Lx7 LINE L1 5443 5726 -1970 7 1328 1448 291 83 31 chrX 97431708 97432442 -69217854 - L1MB5 LINE L1 -107 6067 5296 7 1328 892 203 204 7 chrX 97432453 97432761 -69217535 - L1MB3 LINE L1 -9 6174 5806 7 1328 273 286 43 0 chrX 97433661 97433731 -69216565 + B1F1 SINE Alu 39 111 -38 7 1328 238 322 48 40 chrX 97434541 97434667 -69215629 + Charlie8 DNA MER1_type 45 171 -2257 7 1328 626 185 0 8 chrX 97434905 97435036 -69215260 + (TA)n Simple_repeat Simple_repeat 2 131 0 7 1328 332 349 105 71 chrX 97435052 97435434 -69214862 - MLT1C LTR MaLR -72 395 1 7 1328 1196 28 7 0 chrX 97435531 97435673 -69214623 + B1_Mus2 SINE Alu 2 144 -3 7 1328 328 296 92 0 chrX 97435883 97435981 -69214315 + PB1D10 SINE Alu 1 107 -10 7 1328 492 291 34 7 chrX 97436071 97436220 -69214076 + MIR3 SINE MIR 50 202 -6 7 1328 577 335 32 0 chrX 97436883 97437071 -69213225 - MLT1B LTR MaLR -71 319 126 7 1328 246 349 97 42 chrX 97437162 97437335 -69212961 - MIR3 SINE MIR -13 195 6 7 1328 1150 262 76 46 chrX 97438758 97439126 -69211170 + MTD LTR MaLR 41 419 0 7 1328 566 292 29 0 chrX 97439887 97440024 -69210272 - ID_B1 SINE B4 0 224 84 7 1328 201 163 0 0 chrX 97440224 97440273 -69210023 + (TA)n Simple_repeat Simple_repeat 1 49 0 7 1328 739 311 18 0 chrX 97440509 97440734 -69209562 + MIR SINE MIR 34 262 0 7 1328 252 325 107 48 chrX 97440781 97440949 -69209347 + MIR SINE MIR 4 181 -81 7 1328 281 286 123 25 chrX 97441537 97441659 -69208637 + MamRep1161 DNA Tigger 30 162 -795 7 1328 681 263 216 26 chrX 97441691 97442144 -69208152 + MamRep1161 DNA TcMar 195 733 -224 7 1328 212 333 62 36 chrX 97442209 97442321 -69207975 + L2c LINE L2 3268 3382 -5 7 1328 184 314 0 0 chrX 97443487 97443538 -69206758 - L3 LINE CR1 -7 4482 4432 7 1328 2030 246 95 28 chrX 97443538 97443565 -69206731 + Lx8 LINE L1 6788 6814 -659 7 1328 324 0 0 0 chrX 97443565 97443601 -69206695 + (TAA)n Simple_repeat Simple_repeat 1 36 0 7 1328 2030 246 95 28 chrX 97443601 97444216 -69206080 + Lx8 LINE L1 6815 7473 0 7 1328 308 119 38 162 chrX 97444459 97444539 -69205757 + HAL1-3A_ME LINE L1 1976 2045 -813 7 1328 1169 192 9 27 chrX 97445109 97445304 -69204992 + B3 SINE B2 1 196 -20 8 1328 2987 57 28 5 chrX 97445304 97445695 -69204601 + MTB LTR MaLR 1 400 0 8 1328 1169 192 9 27 chrX 97445695 97445719 -69204577 + B3 SINE B2 197 216 0 8 1328 330 312 27 18 chrX 97446009 97446120 -69204176 - PB1D10 SINE Alu -1 116 5 8 1328 343 316 31 0 chrX 97446032 97446130 -69204166 - ID_B1 SINE B4 -48 176 76 8 1328 250 185 0 18 chrX 97446375 97446430 -69203866 + U2 snRNA snRNA 1 54 -134 8 1328 23 0 0 0 chrX 97446676 97446699 -69203597 + AT_rich Low_complexity Low_complexity 1 23 0 8 1328 351 0 0 0 chrX 97446997 97447036 -69203260 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1328 238 143 0 0 chrX 97447072 97447107 -69203189 + U2 snRNA snRNA 1 35 -153 8 1328 523 265 37 6 chrX 97447202 97447365 -69202931 + L3 LINE CR1 2161 2328 -2161 8 1328 254 319 140 52 chrX 97447722 97448128 -69202168 + L3 LINE CR1 2581 3022 -1467 8 1328 438 306 6 0 chrX 97448165 97448281 -69202015 + PB1D10 SINE Alu 4 123 -26 8 1328 217 295 39 0 chrX 97448282 97448360 -69201936 + (TAGA)n Simple_repeat Simple_repeat 1 81 0 8 1328 183 42 0 0 chrX 97448942 97448966 -69201330 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 8 1328 903 128 13 33 chrX 97448966 97449119 -69201177 - B1_Mur4 SINE Alu 0 150 1 8 1328 350 312 112 0 chrX 97449221 97449346 -69200950 + L3 LINE CR1 3485 3623 -866 8 1328 262 344 43 51 chrX 97449534 97449672 -69200624 + L3 LINE CR1 4339 4475 -14 8 1328 241 289 19 0 chrX 97449835 97449887 -69200409 - ID4 SINE ID -30 53 1 8 1328 1419 64 0 11 chrX 97450784 97450973 -69199323 + L1Md_F3 LINE L1 6384 6570 -14 8 1328 219 322 130 16 chrX 97451171 97451294 -69199002 - L2b LINE L2 -19 3356 3220 8 1328 27 0 0 0 chrX 97451647 97451674 -69198622 + AT_rich Low_complexity Low_complexity 1 27 0 8 1328 847 134 16 0 chrX 97451703 97451830 -69198466 + B1_Mur1 SINE Alu 21 149 0 8 1328 311 109 0 18 chrX 97451866 97451880 -69198416 + (TAAAA)n Simple_repeat Simple_repeat 1 13 0 8 1328 936 47 156 0 chrX 97451880 97452008 -69198288 + B1_Mus1 SINE Alu 1 148 0 8 1328 311 109 0 18 chrX 97452008 97452049 -69198247 + (TAAAA)n Simple_repeat Simple_repeat 4 44 0 8 1328 686 307 25 0 chrX 97452051 97452214 -69198082 + B3A SINE B2 1 167 -31 8 1328 26 74 0 0 chrX 97452345 97452399 -69197897 + AT_rich Low_complexity Low_complexity 1 54 0 8 1328 231 273 56 32 chrX 97452750 97452875 -69197421 - CR1_Mam LINE CR1 -945 1259 1132 8 1328 294 319 41 28 chrX 97453183 97453328 -69196968 - B1F SINE Alu 0 149 3 8 1328 244 244 11 128 chrX 97453407 97453501 -69196795 + MT2B LTR ERVL 155 237 -364 8 1328 430 326 38 23 chrX 97453427 97453559 -69196737 + ID_B1 SINE B4 87 220 -4 8 1328 30646 95 9 5 chrX 97453600 97459346 -69190950 + L1Md_F2 LINE L1 3 5585 -298 8 1328 7668 62 3 8 chrX 97459347 97460347 -69189949 + L1Md_F2 LINE L1 5587 6581 -1 8 1328 296 289 410 8 chrX 97460347 97460577 -69189719 + Lx8 LINE L1 4627 4949 -1194 8 1328 21 0 0 0 chrX 97460780 97460801 -69189495 + AT_rich Low_complexity Low_complexity 1 21 0 8 1328 690 13 0 0 chrX 97460976 97461055 -69189241 + (GGAA)n Simple_repeat Simple_repeat 2 80 0 8 1328 293 295 157 20 chrX 97461056 97461108 -69189188 + Lx8 LINE L1 4952 5004 -1139 8 1328 3691 184 23 7 chrX 97461108 97461816 -69188480 + Lx4B LINE L1 6339 7057 -1 8 1328 429 297 148 19 chrX 97461816 97462196 -69188100 + Lx8 LINE L1 5005 5407 -473 8 1328 255 200 148 10 chrX 97462265 97462366 -69187930 + Lx8 LINE L1 7354 7468 -5 8 1328 580 303 71 37 chrX 97462558 97462600 -69187696 + Lx8 LINE L1 5430 5468 -832 8 1328 1928 145 52 60 chrX 97462600 97462827 -69187469 - ORR1C1 LTR MaLR 0 378 156 8 1328 1186 54 0 20 chrX 97462827 97462977 -69187319 - B1_Mm SINE Alu 0 147 1 8 1328 1928 145 52 60 chrX 97462977 97463130 -69187166 - ORR1C1 LTR MaLR -223 155 1 8 1328 632 284 52 25 chrX 97463130 97463437 -69186859 + Lx8 LINE L1 5469 5791 -509 8 1328 206 57 57 0 chrX 97463437 97463472 -69186824 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 8 1328 229 81 0 0 chrX 97463497 97463534 -69186762 + L1_Mur3 LINE L1 4555 4591 -1289 8 1328 313 255 76 16 chrX 97463541 97463688 -69186608 + Lx8 LINE L1 5786 5930 -370 8 1328 351 311 22 22 chrX 97464860 97464995 -69185301 + L3b LINE CR1 2 136 -346 8 1328 251 277 45 30 chrX 97466031 97466098 -69184198 - ID4 SINE ID -2 81 14 8 1328 243 0 0 0 chrX 97466112 97466139 -69184157 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 1328 1106 239 155 33 chrX 97466251 97466762 -69183534 - L1MC3 LINE L1 -157 7628 7056 8 1328 237 196 0 0 chrX 97466768 97466819 -69183477 + (TATG)n Simple_repeat Simple_repeat 1 51 0 8 1328 220 216 72 0 chrX 97467105 97467202 -69183094 + (TA)n Simple_repeat Simple_repeat 2 105 0 8 1328 414 220 96 45 chrX 97467285 97467442 -69182854 - L1MC3 LINE L1 -1711 6284 6120 8 1328 277 266 0 0 chrX 97467472 97467551 -69182745 - L1MC3 LINE L1 -1818 5967 5889 8 1328 2969 76 10 2 chrX 97467615 97468012 -69182284 + MTB LTR MaLR 1 400 0 8 1328 808 160 19 37 chrX 97468012 97468174 -69182122 + MTB-int LTR MaLR 1 159 -939 8 1328 1295 68 0 33 chrX 97468149 97468332 -69181964 + B2_Mm2 SINE B2 12 188 -7 8 1328 6213 99 4 101 chrX 97468330 97469430 -69180866 + MTB-int LTR MaLR 106 1098 0 8 1328 714 91 0 0 chrX 97469462 97469561 -69180735 + MTB_Mm LTR MaLR 309 407 0 8 1328 531 331 15 0 chrX 97469561 97469694 -69180602 - RSINE1 SINE B4 -29 136 2 8 1328 369 309 40 20 chrX 97469708 97469956 -69180340 - L1MC3 LINE L1 -1889 5896 5644 8 1328 1089 273 58 68 chrX 97470002 97470383 -69179913 - MTEa LTR MaLR -2 377 1 8 1328 309 221 208 23 chrX 97470394 97470524 -69179772 - L1MC3 LINE L1 -2227 5558 5405 8 1328 3119 70 0 2 chrX 97470544 97470943 -69179353 - L1_Mus1 LINE L1 0 6567 6170 8 1328 279 0 0 0 chrX 97471001 97471032 -69179264 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 1328 784 286 91 61 chrX 97471047 97471311 -69178985 - B4A SINE B4 -20 272 1 8 1328 1164 49 0 14 chrX 97471847 97471983 -69178313 + B1_Mm SINE Alu 2 137 -10 8 1328 203 0 0 36 chrX 97471983 97472011 -69178285 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 8 1328 257 309 41 10 chrX 97472493 97472591 -69177705 + L2c LINE L2 3038 3138 -249 8 1328 1122 240 177 40 chrX 97472645 97473029 -69177267 - L1_Mur3 LINE L1 -1672 4208 3811 8 1328 438 20 0 0 chrX 97473029 97473080 -69177216 + (TA)n Simple_repeat Simple_repeat 1 51 0 8 1328 1122 240 177 40 chrX 97473080 97473169 -69177127 - L1_Mur3 LINE L1 -2070 3810 3672 8 1328 229 250 16 0 chrX 97473166 97473230 -69177066 - MusHAL1 LINE L1 -348 2364 2300 8 1328 830 208 39 65 chrX 97473365 97473579 -69176717 - RMER6D LTR ERVK 0 720 513 8 1328 1354 214 20 14 chrX 97473579 97473873 -69176423 + BGLII_B LTR ERVK 1 296 -145 8 1328 2301 162 150 25 chrX 97473889 97474369 -69175927 - RMER6D LTR ERVK -180 540 1 8 1328 373 272 63 16 chrX 97474369 97474496 -69175800 + Lx8 LINE L1 7254 7386 -87 8 1328 431 241 142 44 chrX 97475605 97475718 -69174578 + B1_Mur1 SINE Alu 1 124 -25 8 1328 5370 97 5 5 chrX 97475785 97476560 -69173736 - L1_Mus3 LINE L1 -1 6637 5863 8 1328 575 292 138 30 chrX 97477826 97478253 -69172043 + L1MD LINE L1 3829 4301 -1845 8 1328 2182 68 7 3 chrX 97478419 97478701 -69171595 + L1_Mus1 LINE L1 6285 6567 0 8 1328 2210 126 14 0 chrX 97478870 97479219 -69171077 + Lx2 LINE L1 6644 6997 0 8 1328 342 282 117 1 chrX 97479227 97479425 -69170871 + L1M4 LINE L1 4548 4775 -1371 8 1328 460 317 64 43 chrX 97479428 97479764 -69170532 + Lx7 LINE L1 7127 7471 -2 8 1328 341 211 192 5 chrX 97479842 97479985 -69170311 + L1M4 LINE L1 5276 5440 -904 8 1328 334 274 81 35 chrX 97479985 97480072 -69170224 + B4A SINE B4 2 92 -200 8 1328 3855 244 54 19 chrX 97480081 97481321 -69168975 - L1_Mur3 LINE L1 -301 5579 4297 8 1328 844 176 12 24 chrX 97481331 97481500 -69168796 + Lx7 LINE L1 5591 5757 -1939 8 1328 1890 198 54 34 chrX 97481500 97481681 -69168615 + MTD LTR MaLR 3 188 -231 8 1328 1842 75 0 4 chrX 97481681 97481937 -69168359 + L1_Mus4 LINE L1 6382 6636 0 8 1328 1890 198 54 34 chrX 97481937 97482162 -69168134 + MTD LTR MaLR 189 417 -2 8 1328 458 245 64 31 chrX 97482162 97482356 -69167940 + Lx7 LINE L1 5767 5973 -1671 8 1328 801 250 31 0 chrX 97482427 97482623 -69167673 + Lx6 LINE L1 7254 7455 -5 8 1328 395 347 53 31 chrX 97482641 97482867 -69167429 + Lx8 LINE L1 6021 6251 -1222 8 1328 1942 282 30 23 chrX 97482888 97483528 -69166768 + Lx8 LINE L1 6678 7321 -152 8 1328 353 302 39 112 chrX 97483573 97483778 -69166518 + B4A SINE B4 47 236 -56 8 1328 207 0 0 0 chrX 97483831 97483854 -69166442 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 1328 225 289 92 10 chrX 97483870 97483968 -69166328 + L1MA10 LINE L1 6170 6275 -59 8 1328 3298 121 58 4 chrX 97484315 97484829 -69165467 + Lx3A LINE L1 6437 6978 -3 8 1328 26 30 0 0 chrX 97484886 97484919 -69165377 + AT_rich Low_complexity Low_complexity 1 33 0 8 1328 971 284 51 131 chrX 97485080 97485509 -69164787 + MTD LTR MaLR 9 403 -16 8 1328 449 335 106 21 chrX 97485551 97485984 -69164312 - HAL1 LINE L1 -629 1878 1409 8 1328 383 282 57 0 chrX 97487619 97487743 -69162553 + CT-rich Low_complexity Low_complexity 2 132 0 8 1328 298 276 0 0 chrX 97487747 97487805 -69162491 - PB1D10 SINE Alu -52 65 8 8 1328 28 48 0 0 chrX 97489330 97489372 -69160924 + AT_rich Low_complexity Low_complexity 1 42 0 8 1328 33905 34 1 0 chrX 97490051 97496108 -69154188 + L1Md_T LINE L1 1 5589 -297 8 1328 9040 5 0 0 chrX 97496108 97497104 -69153192 + L1Md_T LINE L1 5590 6585 0 8 1328 376 212 30 0 chrX 97497330 97497396 -69152900 + ID4_ SINE ID 11 78 -5 8 1328 438 20 0 0 chrX 97497450 97497501 -69152795 + (TG)n Simple_repeat Simple_repeat 1 51 0 8 1328 545 290 30 2 chrX 97497523 97497687 -69152609 - B3A SINE B2 -48 168 1 8 1328 197 275 56 149 chrX 97498114 97498221 -69152075 + MER5A DNA MER1_type 68 164 -25 8 1328 1149 261 93 21 chrX 97498384 97498760 -69151536 + MLT1A1 LTR MaLR 4 406 -2 8 1328 225 274 7 100 chrX 97498769 97498880 -69151416 - L2a LINE L2 -2 3424 3291 8 1328 596 288 133 5 chrX 97500273 97500538 -69149758 + L1ME2 LINE L1 5449 5765 -2020 1 1328 1281 283 46 37 chrX 97500616 97501049 -69149247 + Lx8 LINE L1 7031 7467 -6 2 1328 524 296 113 15 chrX 97501076 97501412 -69148884 + L1ME2 LINE L1 5787 6155 -9 1 1328 201 154 0 0 chrX 97501957 97501996 -69148300 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 3 1328 609 100 0 0 chrX 97502062 97502152 -69148144 + (TAGA)n Simple_repeat Simple_repeat 1 90 0 4 1328 348 288 35 18 chrX 97502238 97502351 -69147945 - PB1D10 SINE Alu -1 116 2 5 1328 2334 221 39 14 chrX 97502587 97503078 -69147218 - Lx8 LINE L1 -663 6810 6308 6 1328 2869 46 16 13 chrX 97503539 97503915 -69146381 - L1_Mus1 LINE L1 -555 6012 5636 7 1328 4297 42 4 0 chrX 97503916 97504436 -69145860 + L1_Mus1 LINE L1 6046 6567 0 7 1328 1020 313 127 25 chrX 97506966 97507494 -69142802 - L2 LINE L2 -380 3039 2458 8 1328 224 228 69 17 chrX 97507650 97507708 -69142588 - L2 LINE L2 -952 2467 2407 8 1328 359 77 19 0 chrX 97507884 97507936 -69142360 - L1Md_A LINE L1 -5948 776 724 9 1328 7996 53 1 2 chrX 97507950 97508985 -69141311 + L1Md_F2 LINE L1 5588 6582 0 1 1328 23 33 0 0 chrX 97508996 97509026 -69141270 + AT_rich Low_complexity Low_complexity 1 30 0 1 1328 603 264 25 19 chrX 97509060 97509222 -69141074 + RSINE1 SINE B4 3 165 0 1 1328 1411 190 202 7 chrX 97509570 97509877 -69140419 + MTD LTR MaLR 50 416 -3 1 1328 589 280 51 0 chrX 97509965 97510122 -69140174 + RSINE1 SINE B4 1 165 0 1 1328 211 194 0 0 chrX 97510122 97510158 -69140138 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1328 754 235 28 33 chrX 97510168 97510379 -69139917 + B3 SINE B2 2 211 -5 1 1328 719 256 80 10 chrX 97510613 97510814 -69139482 - B3 SINE B2 0 216 2 1 1328 373 326 67 49 chrX 97511102 97511295 -69139001 + MIRb SINE MIR 2 198 -70 1 1328 309 288 15 0 chrX 97512735 97512801 -69137495 - ID4_ SINE ID -7 76 10 1 1328 380 250 103 35 chrX 97512888 97513004 -69137292 + PB1 SINE Alu 1 124 -3 2 1328 542 385 74 44 chrX 97513978 97514342 -69135954 - L2b LINE L2 -1 3374 3000 2 1328 1458 232 30 10 chrX 97514346 97514734 -69135562 - L1_Rod LINE L1 -1841 4006 3610 2 1328 702 65 0 0 chrX 97514759 97514851 -69135445 + (TC)n Simple_repeat Simple_repeat 1 92 0 2 1328 2031 306 99 22 chrX 97514868 97515674 -69134622 - Lx9 LINE L1 -319 7325 6458 2 1328 303 286 78 14 chrX 97515679 97515821 -69134475 + Lx9 LINE L1 7419 7569 -75 2 1328 329 308 69 0 chrX 97516091 97516250 -69134046 + L1MC LINE L1 5600 5769 -2113 2 1328 4225 42 2 4 chrX 97516284 97516804 -69133492 + L1Md_F2 LINE L1 6061 6579 -3 2 1328 38 22 0 0 chrX 97516906 97516951 -69133345 + AT_rich Low_complexity Low_complexity 1 45 0 2 1329 843 95 0 0 chrX 97517704 97517820 -69132476 + B2_Mm2 SINE B2 2 117 -78 2 1329 205 335 200 8 chrX 97517889 97518124 -69132172 - L2b LINE L2 -814 2605 2326 2 1329 429 20 0 0 chrX 97518164 97518214 -69132082 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1329 293 333 78 10 chrX 97518318 97518421 -69131875 - MLT1K LTR MaLR -188 407 298 3 1329 199 210 0 6 chrX 97518548 97518597 -69131699 + MIRm SINE MIR 216 262 0 3 1329 427 361 6 12 chrX 97519678 97519849 -69130447 + Lx8 LINE L1 7062 7231 -242 3 1329 16048 88 16 7 chrX 97520036 97523053 -69127243 + L1Md_F LINE L1 358 3402 -2481 3 1329 532 118 0 10 chrX 97523056 97523159 -69127137 + Lx3_Mus LINE L1 6908 7009 0 3 1329 4453 131 19 9 chrX 97523163 97523864 -69126432 + L1_Mm LINE L1 5005 5712 -171 3 1329 244 241 45 18 chrX 97526673 97526783 -69123513 + Charlie5 DNA MER1_type 2428 2540 -84 3 1329 538 281 107 56 chrX 97526847 97527062 -69123234 - B4A SINE B4 -19 273 48 3 1329 380 189 377 39 chrX 97528397 97528551 -69121745 - B3 SINE B2 -10 206 1 3 1329 22 0 0 0 chrX 97528614 97528636 -69121660 + AT_rich Low_complexity Low_complexity 1 22 0 3 1329 423 0 0 0 chrX 97528775 97528822 -69121474 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1329 233 322 17 0 chrX 97529283 97529342 -69120954 + ID4_ SINE ID 8 67 -16 4 1329 332 300 88 6 chrX 97529791 97529972 -69120324 - L1MA7 LINE L1 -51 6240 6045 4 1329 1800 55 4 17 chrX 97529986 97530227 -69120069 - L1Md_F2 LINE L1 -12 6570 6333 4 1329 910 37 0 0 chrX 97530227 97530336 -69119960 + L1Md_F2 LINE L1 6228 6336 -246 4 1329 192 125 0 0 chrX 97530378 97530410 -69119886 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1329 570 294 22 7 chrX 97530434 97530571 -69119725 - RSINE1 SINE B4 -24 141 3 4 1329 271 250 78 150 chrX 97530573 97530766 -69119530 - L1MA7 LINE L1 -273 6039 5861 4 1329 351 0 0 0 chrX 97530814 97530853 -69119443 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1329 744 260 39 6 chrX 97530856 97531034 -69119262 - B3 SINE B2 -32 184 1 4 1329 393 110 0 0 chrX 97531073 97531146 -69119150 + (TCTG)n Simple_repeat Simple_repeat 4 76 0 4 1329 894 102 31 13 chrX 97531150 97531309 -69118987 + Lx3_Mus LINE L1 6846 7007 -2 4 1329 726 286 74 41 chrX 97531314 97531678 -69118618 - L1MA7 LINE L1 -630 5661 5286 4 1329 375 202 56 0 chrX 97531751 97531840 -69118456 - L1M4 LINE L1 -664 5520 5427 5 1329 270 243 54 0 chrX 97531861 97531935 -69118361 - ID SINE ID -146 78 1 5 1329 250 279 147 0 chrX 97532453 97532521 -69117775 + ID4 SINE ID 6 83 0 5 1329 24 0 0 0 chrX 97532736 97532760 -69117536 + AT_rich Low_complexity Low_complexity 1 24 0 5 1329 318 316 0 0 chrX 97534970 97535046 -69115250 + ID4 SINE ID 8 83 0 5 1329 1303 290 91 23 chrX 97535540 97536055 -69114241 + Lx8 LINE L1 6923 7472 -1 5 1329 189 0 0 0 chrX 97536131 97536152 -69114144 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 5 1329 306 333 49 34 chrX 97536200 97536464 -69113832 + L1MDa LINE L1 130 397 -6236 5 1329 7358 65 9 12 chrX 97536553 97537950 -69112346 - L1_Mus2 LINE L1 -14 6552 5160 5 1329 261 229 0 41 chrX 97538689 97538762 -69111534 + L1MDa LINE L1 1014 1083 -5550 5 1329 353 206 247 19 chrX 97538818 97538976 -69111320 + L1MDa LINE L1 1226 1419 -5121 5 1329 4195 159 78 92 chrX 97538976 97539426 -69110870 - RMER19B LTR ERVK 0 902 435 5 1329 324 0 0 0 chrX 97539426 97539462 -69110834 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 6 1329 4195 159 78 92 chrX 97539462 97539926 -69110370 - RMER19B LTR ERVK -468 434 1 5 1329 817 147 15 0 chrX 97539933 97540069 -69110227 + ORR1C1 LTR MaLR 25 162 -216 6 1329 525 245 29 0 chrX 97540140 97540279 -69110017 + L1MB3 LINE L1 5819 5961 -222 6 1329 718 255 6 0 chrX 97540283 97540440 -69109856 + RSINE1 SINE B4 4 161 -4 6 1329 341 193 149 0 chrX 97540511 97540625 -69109671 + L1MB3 LINE L1 6037 6167 -4 6 1329 362 268 30 52 chrX 97540635 97540769 -69109527 + L1MDa LINE L1 1590 1720 -4913 5 1329 212 184 0 0 chrX 97540784 97540822 -69109474 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 6 1329 410 282 26 35 chrX 97540829 97540943 -69109353 - B1F1 SINE Alu -36 113 1 6 1329 886 274 99 23 chrX 97540944 97541418 -69108878 + L1MDa LINE L1 1703 2212 -4421 5 1329 1207 262 64 39 chrX 97541434 97541870 -69108426 + L1MB7 LINE L1 5636 6082 -102 6 1329 227 175 18 0 chrX 97541903 97541960 -69108336 + CT-rich Low_complexity Low_complexity 2 59 0 6 1329 729 302 60 18 chrX 97541964 97542295 -69108001 + L1MDa LINE L1 3914 4258 -2279 5 1329 370 264 168 15 chrX 97542299 97542430 -69107866 + RSINE1 SINE B4 3 153 -12 6 1329 813 205 88 83 chrX 97542438 97542619 -69107677 + B3A SINE B2 5 186 -9 6 1329 690 162 73 7 chrX 97542772 97542909 -69107387 - Lx9 LINE L1 -392 7252 7107 7 1329 1017 139 175 0 chrX 97542908 97543015 -69107281 + Lx9 LINE L1 7376 7514 -130 7 1329 439 45 30 0 chrX 97543015 97543081 -69107215 + (TA)n Simple_repeat Simple_repeat 1 68 0 7 1329 1017 139 175 0 chrX 97543081 97543196 -69107100 + Lx9 LINE L1 7515 7636 -8 7 1329 960 158 20 0 chrX 97543256 97543402 -69106894 + B1_Mur4 SINE Alu 2 150 0 7 1329 1154 316 76 34 chrX 97543435 97543972 -69106324 - Lx8 LINE L1 -331 7142 6583 7 1329 320 281 152 19 chrX 97543990 97544095 -69106201 + Lx8 LINE L1 7174 7292 -181 7 1329 670 239 7 7 chrX 97544147 97544282 -69106014 - B1_Mur2 SINE Alu -11 138 4 7 1329 271 355 43 52 chrX 97544180 97544296 -69106000 - B4 SINE B4 -98 194 80 7 1329 358 286 47 166 chrX 97544410 97544541 -69105755 + L1MDa LINE L1 4525 4644 -1893 5 1329 3046 59 31 0 chrX 97544541 97544933 -69105363 - L1_Mus2 LINE L1 0 6566 6163 7 1329 358 286 47 166 chrX 97544933 97545036 -69105260 + L1MDa LINE L1 4645 4731 -1806 5 1329 1566 60 37 9 chrX 97545062 97545279 -69105017 - L1Md_F2 LINE L1 -3 6579 6357 7 1329 245 192 0 37 chrX 97545346 97545400 -69104896 - PB1 SINE Alu -1 126 75 7 1329 496 211 9 37 chrX 97545353 97545461 -69104835 - ID_B1 SINE B4 -7 217 113 7 1329 533 303 97 70 chrX 97545613 97545652 -69104644 - L1MDa LINE L1 -4250 2383 2350 8 1329 459 0 0 0 chrX 97545652 97545703 -69104593 + (TAGA)n Simple_repeat Simple_repeat 1 51 0 8 1329 533 303 97 70 chrX 97545703 97546333 -69103963 - L1MDa LINE L1 -4284 2349 1696 8 1329 1106 283 68 23 chrX 97546397 97546871 -69103425 - L1MDa LINE L1 -5296 1337 843 8 1329 509 221 115 19 chrX 97546981 97547189 -69103107 - L1MDb LINE L1 -5254 1286 1059 8 1329 697 332 45 32 chrX 97547189 97547435 -69102861 + Tigger5 DNA MER2_type 2 250 -2156 8 1329 243 306 28 0 chrX 97547430 97547502 -69102794 + Tigger5 DNA MER2_type 2333 2406 0 8 1329 293 309 76 35 chrX 97548111 97548282 -69102014 - L1MDb LINE L1 -6349 284 107 8 1329 543 313 59 49 chrX 97548332 97548722 -69101574 - L1ME3B LINE L1 -271 5969 5576 8 1329 269 292 95 26 chrX 97548769 97549001 -69101295 - L1ME3B LINE L1 -993 5153 4906 8 1329 191 331 47 55 chrX 97549205 97549333 -69100963 - MIRb SINE MIR -10 258 132 8 1329 345 24 0 0 chrX 97549424 97549466 -69100830 + (CATA)n Simple_repeat Simple_repeat 3 44 0 8 1329 1497 241 38 22 chrX 97549564 97549933 -69100363 - MTE2b LTR MaLR -4 375 1 8 1329 1134 240 107 64 chrX 97550511 97550930 -69099366 + RMER13A LTR ERVK 1 437 -423 8 1329 197 373 40 0 chrX 97551430 97551505 -69098791 - MER5A DNA MER1_type -51 138 61 8 1329 344 296 0 0 chrX 97553894 97553975 -69096321 - ID4_ SINE ID -1 82 2 9 1329 995 299 68 28 chrX 97553996 97554281 -69096015 - B4A SINE B4 0 292 10 9 1329 228 338 0 0 chrX 97554417 97554491 -69095805 + L1M5 LINE L1 3587 3660 -2486 9 1329 254 295 0 0 chrX 97554547 97554608 -69095688 + Lx8 LINE L1 6573 6633 -840 9 1329 1555 192 156 14 chrX 97554608 97554973 -69095323 - MTD LTR MaLR -2 417 1 9 1329 2223 305 29 13 chrX 97554973 97555665 -69094631 + Lx8 LINE L1 6627 7329 -144 9 1329 366 241 114 57 chrX 97555859 97556070 -69094226 + L1M3 LINE L1 3723 3945 -2195 9 1329 1043 222 5 5 chrX 97556181 97556380 -69093916 - B3 SINE B2 -7 209 11 9 1329 363 317 72 29 chrX 97556819 97557027 -69093269 - MIRb SINE MIR -38 230 14 9 1329 273 346 43 19 chrX 97557848 97558010 -69092286 + MER5B DNA MER1_type 5 170 -8 9 1329 432 311 92 42 chrX 97558243 97558602 -69091694 + CR1_Mam LINE CR1 1142 1518 -686 9 1329 333 195 28 28 chrX 97558614 97558717 -69091579 + MIR SINE MIR 63 166 -42 1 1329 2060 291 94 32 chrX 97559440 97560336 -69089960 - Lx9 LINE L1 -20 7624 6674 1 1329 241 316 25 0 chrX 97560352 97560431 -69089865 - MIRc SINE MIR -139 129 49 1 1329 271 291 38 0 chrX 97560750 97560829 -69089467 + PB1D10 SINE Alu 36 117 0 1 1329 884 289 6 8 chrX 97560830 97561055 -69089241 + B4A SINE B4 5 227 -65 1 1329 583 347 25 11 chrX 97561055 97561263 -69089033 + RSINE1 SINE B4 1 219 -73 1 1329 204 40 0 0 chrX 97561263 97561288 -69089008 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 1 1329 225 371 86 40 chrX 97561288 97561357 -69088939 + B4 SINE B4 220 290 -2 1 1329 317 299 98 91 chrX 97562631 97562789 -69087507 - L2c LINE L2 0 3387 3234 1 1329 529 149 450 7 chrX 97562789 97562938 -69087358 + B3 SINE B2 2 216 0 1 1329 317 299 98 91 chrX 97562938 97563044 -69087252 - L2c LINE L2 -154 3233 3122 1 1329 441 0 0 0 chrX 97563252 97563301 -69086995 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 1329 1190 262 161 15 chrX 97563326 97563873 -69086423 - L1MC2 LINE L1 -398 6121 5495 1 1329 243 88 0 0 chrX 97563882 97563916 -69086380 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 1 1329 6121 211 60 11 chrX 97563916 97565261 -69085035 - Lx4B LINE L1 -16 7042 5632 1 1329 665 164 28 25 chrX 97565453 97565600 -69084696 - B1_Mur4 SINE Alu 0 150 3 1 1329 258 32 0 0 chrX 97565610 97565641 -69084655 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1329 1168 62 14 0 chrX 97565641 97565787 -69084509 - B1_Mus1 SINE Alu 0 148 1 1 1329 3194 270 83 11 chrX 97565840 97567121 -69083175 - L1MC2 LINE L1 -985 5336 3963 1 1329 238 283 17 0 chrX 97567232 97567292 -69083004 + MTC LTR MaLR 3 63 -358 1 1329 460 254 80 0 chrX 97567307 97567445 -69082851 + MTD LTR MaLR 267 415 -4 1 1329 667 248 29 102 chrX 97567449 97567723 -69082573 + MTD-int LTR MaLR 1 254 -1004 1 1329 390 304 14 47 chrX 97567746 97567957 -69082339 + L1_Rod LINE L1 4891 5094 -753 1 1329 1077 271 74 64 chrX 97567955 97568310 -69081986 + L1_Rod LINE L1 5327 5679 -168 1 1329 1649 206 105 8 chrX 97568310 97568692 -69081604 + MTD LTR MaLR 1 419 0 1 1329 1077 271 74 64 chrX 97568692 97568852 -69081444 + L1_Rod LINE L1 5680 5847 0 1 1329 2511 263 109 71 chrX 97569123 97570069 -69080227 + Lx8 LINE L1 6330 7311 -162 1 1329 383 184 9 37 chrX 97570207 97570314 -69079982 - Lx9 LINE L1 0 7644 7541 1 1329 421 251 162 51 chrX 97570326 97570523 -69079773 - Lx9 LINE L1 -185 7459 7241 1 1329 467 225 186 9 chrX 97570532 97570756 -69079540 - L1MC2 LINE L1 -4534 1868 1577 1 1329 1057 159 48 106 chrX 97571008 97571338 -69078958 + RLTRETN_Mm LTR ERVK 12 322 0 1 1329 637 204 61 0 chrX 97572523 97572655 -69077641 + B1F2 SINE Alu 9 148 -1 1 1329 189 0 0 0 chrX 97572655 97572676 -69077620 + (CAAAAA)n Simple_repeat Simple_repeat 1 21 0 1 1329 1012 127 62 62 chrX 97572676 97572869 -69077427 + B2_Mm2 SINE B2 2 194 -1 1 1329 814 241 94 15 chrX 97572873 97573075 -69077221 - Lx7 LINE L1 -1792 5904 5687 1 1329 1218 241 351 37 chrX 97573074 97573358 -69076938 - Lx8 LINE L1 -143 7330 6947 1 1329 2553 113 105 3 chrX 97573358 97573740 -69076556 - MTC LTR MaLR 0 421 1 1 1329 1218 280 95 51 chrX 97573740 97573984 -69076312 - Lx8 LINE L1 -527 6946 6700 1 1329 3161 42 0 10 chrX 97573984 97574371 -69075925 - L1Md_F2 LINE L1 -2 6580 6198 1 1329 1218 280 95 51 chrX 97574371 97574383 -69075913 - Lx8 LINE L1 -774 6699 6688 1 1329 483 178 13 140 chrX 97574432 97574589 -69075707 + B1F1 SINE Alu 12 148 -1 1 1329 2034 148 87 45 chrX 97574706 97575130 -69075166 - RMER10A LTR ERVL 0 442 1 1 1329 381 257 48 0 chrX 97575549 97575654 -69074642 + PB1D10 SINE Alu 1 110 -7 1 1329 474 88 0 0 chrX 97577045 97577113 -69073183 + (TTTA)n Simple_repeat Simple_repeat 2 69 0 1 1329 405 0 0 0 chrX 97577625 97577670 -69072626 + (CTTG)n Simple_repeat Simple_repeat 4 48 0 1 1329 299 311 0 13 chrX 97577876 97577951 -69072345 - ID4_ SINE ID -9 74 1 1 1329 392 302 17 8 chrX 97577968 97578085 -69072211 - B1F SINE Alu -11 138 21 1 1329 862 271 0 19 chrX 97578102 97578316 -69071980 + B3 SINE B2 2 211 -5 1 1329 183 42 0 0 chrX 97578933 97578957 -69071339 + (CCA)n Simple_repeat Simple_repeat 2 25 0 1 1329 2637 53 0 0 chrX 97579234 97579554 -69070742 - L1_Mus1 LINE L1 0 6567 6248 1 1329 2912 44 6 0 chrX 97580341 97580685 -69069611 + ORR1A1 LTR MaLR 1 346 0 1 1329 13865 58 12 9 chrX 97580685 97582473 -69067823 + ORR1A1-int LTR MaLR 1 1792 0 1 1329 2526 68 61 3 chrX 97582473 97582800 -69067496 + ORR1A1 LTR MaLR 1 346 0 1 1329 957 146 196 0 chrX 97582930 97583149 -69067147 - RMER1B Other Other -4 1062 801 1 1329 1443 216 57 64 chrX 97583300 97583705 -69066591 + MTD LTR MaLR 18 419 0 1 1329 941 176 123 0 chrX 97583833 97584020 -69066276 + L3 LINE CR1 1611 1820 -2669 1 1329 455 307 112 35 chrX 97584033 97584320 -69065976 + L3b LINE CR1 60 368 -114 1 1329 217 299 126 17 chrX 97586147 97586266 -69064030 - L2c LINE L2 -3 3384 3253 1 1329 471 35 0 0 chrX 97587012 97587069 -69063227 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1329 234 343 55 14 chrX 97587326 97587471 -69062825 - MIRc SINE MIR -1 267 117 1 1329 366 272 0 0 chrX 97587935 97588016 -69062280 - ID4 SINE ID -2 81 1 1 1329 375 329 83 18 chrX 97588399 97588493 -69061803 - MIRb SINE MIR -13 255 147 1 1329 210 37 0 0 chrX 97588493 97588520 -69061776 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 1 1329 375 319 55 24 chrX 97588520 97588633 -69061663 - MIRb SINE MIR -120 148 29 1 1329 222 301 48 14 chrX 97596440 97596582 -69053714 - MIR SINE MIR -117 151 8 1 1329 257 234 78 0 chrX 97596840 97596904 -69053392 + tRNA-Ala-GCA tRNA tRNA 4 72 -3 1 1329 483 171 49 0 chrX 97597071 97597153 -69053143 + CR1_Mam LINE CR1 839 924 -1280 1 1329 313 293 43 0 chrX 97597542 97597658 -69052638 - MIRc SINE MIR -20 248 128 1 1329 574 300 92 31 chrX 97599094 97599290 -69051006 + B4 SINE B4 22 229 -63 1 1329 1336 94 5 30 chrX 97600493 97600690 -69049606 + B2_Mm1a SINE B2 2 193 0 1 1329 423 0 0 0 chrX 97601123 97601170 -69049126 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1329 1239 177 18 0 chrX 97601465 97601685 -69048611 + URR1B DNA MER1_type 1 224 -1 1 1329 443 330 104 21 chrX 97602404 97602596 -69047700 + Tigger5 DNA MER2_type 1 208 -2198 1 1329 274 368 8 64 chrX 97602675 97602800 -69047496 - PB1D7 SINE Alu -2 118 1 1 1329 324 291 149 57 chrX 97602874 97603049 -69047247 + HAL1 LINE L1 1593 1783 -724 1 1329 285 328 54 8 chrX 97603059 97603188 -69047108 + MER96 DNA hAT 2 136 -39 1 1329 256 247 82 0 chrX 97603303 97603400 -69046896 + HAL1 LINE L1 1928 2032 -475 1 1329 461 252 53 19 chrX 97603406 97603568 -69046728 + B3 SINE B2 1 183 -10 1 1329 872 169 0 0 chrX 97603700 97603842 -69046454 + B1_Mur2 SINE Alu 2 143 -6 1 1329 274 292 0 15 chrX 97603842 97603908 -69046388 + polypurine Low_complexity Low_complexity 2 66 0 1 1329 331 248 123 62 chrX 97603954 97604100 -69046196 + HAL1 LINE L1 2244 2398 -109 1 1329 396 269 26 9 chrX 97604799 97604915 -69045381 + B1_Mur1 SINE Alu 30 147 -2 1 1329 255 180 20 0 chrX 97604977 97605027 -69045269 + L1M LINE L1 5367 5417 -823 1 1329 245 346 96 0 chrX 97605328 97605432 -69044864 - MIR SINE MIR -148 114 1 1 1329 243 0 0 0 chrX 97605521 97605548 -69044748 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 1329 369 0 0 0 chrX 97605548 97605588 -69044708 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1329 245 306 45 0 chrX 97606717 97606847 -69043449 + MIR SINE MIR 61 203 -59 1 1329 549 120 0 0 chrX 97607504 97607596 -69042700 + (CA)n Simple_repeat Simple_repeat 1 92 0 1 1329 730 302 5 0 chrX 97608581 97608796 -69041500 + B3 SINE B2 1 216 0 1 1329 207 0 0 0 chrX 97608802 97608825 -69041471 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1329 1087 59 0 7 chrX 97608825 97608961 -69041335 - B1_Mm SINE Alu -11 136 2 1 1329 22 0 0 0 chrX 97608971 97608993 -69041303 + AT_rich Low_complexity Low_complexity 1 22 0 1 1329 696 225 29 0 chrX 97609010 97609148 -69041148 + RSINE1 SINE B4 5 146 -19 1 1329 460 128 54 36 chrX 97609223 97609325 -69040971 - B1_Mur3 SINE Alu -10 138 38 1 1329 375 249 154 20 chrX 97609349 97609550 -69040746 + L1ME2z LINE L1 6115 6342 -102 1 1329 670 333 79 34 chrX 97609782 97610325 -69039971 - L2a LINE L2 -17 3409 2835 1 1329 569 185 37 0 chrX 97611153 97611261 -69039035 - PB1D7 SINE Alu -7 113 2 1 1329 845 175 7 0 chrX 97611625 97611762 -69038534 + B1_Mur3 SINE Alu 1 138 -11 1 1329 203 95 48 0 chrX 97611764 97611806 -69038490 + (CAGAGA)n Simple_repeat Simple_repeat 2 45 0 1 1329 334 298 80 23 chrX 97612779 97612954 -69037342 - RMER15 LTR ERVL -55 520 336 1 1329 463 206 43 224 chrX 97613439 97613671 -69036625 - MER53 DNA hAT -3 190 1 1 1329 335 315 60 43 chrX 97614176 97614292 -69036004 + L2a LINE L2 3309 3426 0 1 1329 252 0 0 0 chrX 97615118 97615146 -69035150 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1 1329 1109 67 0 0 chrX 97615146 97615281 -69035015 - B1_Mus1 SINE Alu -13 135 1 1 1329 234 303 0 0 chrX 97615290 97615356 -69034940 + L4 LINE RTE 1319 1384 -645 1 1329 291 257 148 28 chrX 97615981 97616089 -69034207 + RSINE1 SINE B4 2 122 -43 1 1329 698 298 117 50 chrX 97616200 97616680 -69033616 + L1MDa LINE L1 32 543 -6090 1 1329 3493 264 28 42 chrX 97616832 97617808 -69032488 + Lx8 LINE L1 6391 7352 -121 1 1329 335 221 62 21 chrX 97617839 97617936 -69032360 + MTEb LTR MaLR 276 376 -3 1 1329 421 250 46 61 chrX 97617939 97618135 -69032161 + L1MDa LINE L1 4768 4960 -1577 1 1329 2096 160 41 52 chrX 97618152 97618540 -69031756 + ORR1C2 LTR MaLR 1 384 0 1 1329 3677 232 39 19 chrX 97618541 97619469 -69030827 + ORR1C2-int LTR MaLR 2 947 -423 1 1329 1111 236 143 99 chrX 97619562 97620065 -69030231 - MT2B LTR ERVL 0 601 9 1 1329 737 260 49 121 chrX 97620094 97620567 -69029729 + L1MDa LINE L1 5006 5444 -1093 1 1329 608 316 35 14 chrX 97620701 97620994 -69029302 - L1M3 LINE L1 -596 5593 5298 1 1329 309 109 0 0 chrX 97621021 97621067 -69029229 + (TAGA)n Simple_repeat Simple_repeat 2 47 0 1 1329 679 260 76 36 chrX 97621257 97621532 -69028764 + L1M3 LINE L1 4808 5093 -1047 1 1329 246 105 0 0 chrX 97621532 97621570 -69028726 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1329 276 30 0 0 chrX 97621570 97621602 -69028694 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 1329 326 239 171 0 chrX 97621645 97621733 -69028563 + RSINE1 SINE B4 3 105 -60 2 1329 522 0 0 0 chrX 97621757 97621815 -69028481 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1329 468 0 0 0 chrX 97621815 97621866 -69028430 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1329 240 250 0 65 chrX 97622082 97622159 -69028137 + L1MDa LINE L1 5426 5497 -1040 1 1329 197 98 24 0 chrX 97622182 97622223 -69028073 + (CAAAAA)n Simple_repeat Simple_repeat 1 42 0 2 1329 385 252 58 0 chrX 97622281 97622384 -69027912 + PB1D10 SINE Alu 2 110 -7 2 1329 223 295 0 25 chrX 97622403 97622483 -69027813 - ID4 SINE ID -3 80 3 2 1329 779 230 80 13 chrX 97622483 97622721 -69027575 + L1MDa LINE L1 5541 5794 -743 1 1329 466 271 32 38 chrX 97622721 97622878 -69027418 + RSINE1 SINE B4 8 163 -2 2 1329 234 0 0 0 chrX 97622882 97622908 -69027388 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 1329 231 114 0 0 chrX 97622939 97622974 -69027322 + (TAA)n Simple_repeat Simple_repeat 2 36 0 2 1329 469 244 66 10 chrX 97623124 97623271 -69027025 + L1MDa LINE L1 5930 6077 -493 1 1329 548 225 0 16 chrX 97623341 97623463 -69026833 - ID_B1 SINE B4 0 224 105 2 1329 189 0 0 0 chrX 97625527 97625548 -69024748 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1329 273 119 0 0 chrX 97625987 97626029 -69024267 + (T)n Simple_repeat Simple_repeat 1 42 0 2 1329 397 111 117 39 chrX 97626882 97626985 -69023311 + Lx4A LINE L1 6933 7043 -15 2 1329 252 86 0 0 chrX 97626985 97627020 -69023276 + (TAA)n Simple_repeat Simple_repeat 1 35 0 2 1329 1655 127 91 3 chrX 97628172 97628465 -69021831 + Lx4B LINE L1 6723 7040 -18 2 1329 315 0 0 0 chrX 97628465 97628500 -69021796 + (TTAA)n Simple_repeat Simple_repeat 4 38 0 2 1329 1655 127 91 3 chrX 97628500 97628513 -69021783 + Lx4B LINE L1 7041 7055 -3 2 1329 654 184 206 27 chrX 97629461 97629645 -69020651 - MTC LTR MaLR 0 419 203 2 1329 720 83 0 0 chrX 97629645 97629754 -69020542 + (TTCC)n Simple_repeat Simple_repeat 1 109 0 2 1329 288 0 0 0 chrX 97629754 97629786 -69020510 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2 1329 4078 164 92 45 chrX 97629812 97630705 -69019591 - RMER1A Other Other -1 1029 95 2 1329 1219 170 31 9 chrX 97630705 97630931 -69019365 - MTC LTR MaLR -190 231 1 2 1329 310 295 76 23 chrX 97631649 97631781 -69018515 - B1F SINE Alu -9 140 2 2 1329 436 289 73 7 chrX 97632851 97633001 -69017295 - RSINE1 SINE B4 -4 161 2 2 1329 756 231 102 33 chrX 97633004 97633289 -69017007 - L1_Mur3 LINE L1 -303 5821 5533 2 1329 473 277 8 0 chrX 97633484 97633603 -69016693 - B1F SINE Alu 0 149 30 2 1329 4848 44 7 2 chrX 97633932 97634523 -69015773 + L1Md_F2 LINE L1 5989 6582 0 2 1329 376 287 8 0 chrX 97635533 97635662 -69014634 - L1MB3 LINE L1 -217 5966 5837 2 1329 407 335 72 30 chrX 97636085 97636251 -69014045 + B4A SINE B4 2 174 -118 2 1329 2494 71 18 12 chrX 97636289 97636632 -69013664 + Lx3_Mus LINE L1 6660 7004 -5 2 1329 220 293 0 0 chrX 97636648 97636706 -69013590 + RSINE1 SINE B4 87 144 -21 2 1329 225 0 0 0 chrX 97636732 97636757 -69013539 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 1329 244 167 38 25 chrX 97636943 97637023 -69013273 + Lx9 LINE L1 7561 7641 -3 2 1329 204 261 0 0 chrX 97637125 97637190 -69013106 + (TA)n Simple_repeat Simple_repeat 2 66 0 2 1329 2910 148 33 14 chrX 97637412 97637932 -69012364 - Lx4B LINE L1 -1 7057 6528 2 1329 2402 123 6 1 chrX 97637932 97638296 -69012000 - Lx4B LINE L1 -787 6673 6323 2 1329 192 77 0 0 chrX 97638297 97638323 -69011973 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1329 468 0 0 0 chrX 97638376 97638428 -69011868 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1329 297 0 0 0 chrX 97638708 97638741 -69011555 + (G)n Simple_repeat Simple_repeat 1 33 0 2 1329 3056 217 71 34 chrX 97638848 97639357 -69010939 + RCHARR1 DNA MER1_type 2 522 -452 2 1329 793 229 25 54 chrX 97639357 97639560 -69010736 + B3A SINE B2 2 198 0 2 1329 3056 217 71 34 chrX 97639560 97639898 -69010398 + RCHARR1 DNA MER1_type 523 880 -94 2 1329 337 292 124 0 chrX 97640491 97640675 -69009621 - L1MA4A LINE L1 -379 5918 5692 2 1329 641 264 0 21 chrX 97640684 97640827 -69009469 + B1_Mur1 SINE Alu 2 141 -8 2 1329 671 256 153 56 chrX 97640865 97641421 -69008875 - L1_Rod LINE L1 -256 5591 5057 2 1329 2422 120 66 24 chrX 97642962 97643339 -69006957 + ORR1B1 LTR MaLR 2 394 0 2 1329 361 206 0 0 chrX 97643441 97643509 -69006787 + ID SINE ID 1 68 -156 2 1329 387 250 26 18 chrX 97643612 97643726 -69006570 + PB1D9 SINE Alu 1 115 -5 2 1329 522 0 0 0 chrX 97643828 97643886 -69006410 + (ATG)n Simple_repeat Simple_repeat 2 59 0 2 1329 382 221 180 8 chrX 97644060 97644188 -69006108 + B3A SINE B2 2 151 -47 2 1329 216 0 0 0 chrX 97644197 97644221 -69006075 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1329 405 58 0 0 chrX 97644221 97644272 -69006024 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 1329 303 28 0 0 chrX 97644453 97644489 -69005807 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1329 7092 138 41 150 chrX 97644956 97646091 -69004205 + RLTR21 LTR ERVK 2 1112 -460 2 1329 258 32 0 0 chrX 97646091 97646122 -69004174 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1329 7092 138 41 150 chrX 97646122 97646680 -69003616 + RLTR21 LTR ERVK 1113 1508 -64 2 1329 1695 91 11 31 chrX 97646680 97646941 -69003355 + MT2B2 LTR ERVL 1 256 -328 2 1329 894 158 64 147 chrX 97646697 97647023 -69003273 + ORR1A3-int LTR MaLR 627 925 -1038 2 1329 321 71 0 0 chrX 97647023 97647065 -69003231 - L1_Mus3 LINE L1 -283 6355 6314 2 1329 312 98 0 0 chrX 97647068 97647109 -69003187 + Lx LINE L1 6456 6496 -158 2 1329 524 236 0 6 chrX 97647336 97647494 -69002802 + GA-rich Low_complexity Low_complexity 3 159 0 2 1329 953 293 76 10 chrX 97647502 97647805 -69002491 - Lx7 LINE L1 -375 7321 6999 2 1329 4047 79 4 16 chrX 97647831 97648386 -69001910 - L1_Mus3 LINE L1 0 6638 6091 2 1329 341 225 0 0 chrX 97648392 97648463 -69001833 - Lx7 LINE L1 -683 7013 6943 2 1329 317 188 8 64 chrX 97648502 97648627 -69001669 + (TTATA)n Simple_repeat Simple_repeat 1 118 0 2 1330 32 0 0 0 chrX 97648884 97648916 -69001380 + AT_rich Low_complexity Low_complexity 1 32 0 2 1330 1719 257 102 40 chrX 97649022 97649618 -69000678 - Lx8 LINE L1 -2 7471 6839 2 1330 3927 192 76 35 chrX 97649606 97650106 -69000190 - Lx9 LINE L1 -442 7202 6699 2 1330 3156 37 42 0 chrX 97650106 97650486 -68999810 - MTA_Mm LTR MaLR 0 396 1 2 1330 3927 192 76 35 chrX 97650486 97650837 -68999459 - Lx9 LINE L1 -946 6698 6316 2 1330 3366 110 112 142 chrX 97650841 97651168 -68999128 + RMER17A LTR ERVK 1 387 -364 2 1330 940 102 22 17 chrX 97651168 97651347 -68998949 + (TC)n Simple_repeat Simple_repeat 1 180 0 2 1330 3366 110 112 142 chrX 97651347 97651793 -68998503 + RMER17A LTR ERVK 388 750 -1 2 1330 967 239 161 48 chrX 97651840 97652132 -68998164 + Lx9 LINE L1 7176 7476 -168 2 1330 378 0 0 0 chrX 97652132 97652174 -68998122 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1330 967 239 161 48 chrX 97652174 97652302 -68997994 + Lx9 LINE L1 7477 7644 0 2 1330 981 234 36 65 chrX 97652319 97652598 -68997698 - Lx8 LINE L1 -616 6857 6587 2 1330 366 23 0 0 chrX 97652636 97652679 -68997617 + (TATG)n Simple_repeat Simple_repeat 4 46 0 2 1330 5641 266 59 73 chrX 97653415 97655413 -68994883 + RodERV21-int LTR ERV1 732 2701 -2290 2 1330 5513 5 0 0 chrX 97655584 97656184 -68994112 + L1Md_A LINE L1 5983 6582 0 2 1330 437 332 57 55 chrX 97656187 97656646 -68993650 + RodERV21-int LTR ERV1 3615 4074 -3017 2 1330 2383 101 144 3 chrX 97656762 97657130 -68993166 + RLTR9B2 LTR ERVK 1 420 0 2 1330 377 317 74 71 chrX 97657817 97658143 -68992153 + RodERV21-int LTR ERV1 4874 5106 -1985 2 1330 394 299 36 28 chrX 97658480 97658728 -68991568 + RodERV21-int LTR ERV1 3170 3369 -1948 2 1330 3900 331 36 42 chrX 97659002 97661026 -68989270 + RodERV21-int LTR ERV1 2784 4793 -198 2 1330 273 287 22 33 chrX 97661082 97661172 -68989124 + RMER4B LTR ERVK 347 435 -150 2 1330 469 129 11 11 chrX 97661363 97661457 -68988839 + CT-rich Low_complexity Low_complexity 1 94 0 2 1330 402 21 0 0 chrX 97661523 97661570 -68988726 + (TATG)n Simple_repeat Simple_repeat 3 49 0 2 1330 235 179 54 0 chrX 97661999 97662055 -68988241 - L1M2 LINE L1 -1409 4734 4676 2 1330 335 78 20 0 chrX 97662055 97662106 -68988190 + (GA)n Simple_repeat Simple_repeat 2 53 0 2 1330 951 274 44 39 chrX 97662109 97662568 -68987728 - L1M2 LINE L1 -1488 4655 4195 2 1330 410 261 0 0 chrX 97663259 97663351 -68986945 + PB1D10 SINE Alu 1 92 -25 2 1330 288 0 0 0 chrX 97663367 97663399 -68986897 + (TCTA)n Simple_repeat Simple_repeat 4 35 0 2 1330 354 335 59 38 chrX 97664021 97664260 -68986036 + L3 LINE CR1 4041 4284 -205 2 1330 439 158 147 0 chrX 97664814 97664909 -68985387 - MER5A1 DNA MER1_type -35 131 23 2 1330 238 221 0 15 chrX 97666079 97666144 -68984152 + MIR SINE MIR 74 139 -69 2 1330 920 141 0 32 chrX 97666378 97666532 -68983764 + B1_Mur2 SINE Alu 1 149 0 2 1330 294 240 104 19 chrX 97666928 97667034 -68983262 + L2c LINE L2 3273 3387 0 2 1330 405 0 0 0 chrX 97668461 97668506 -68981790 + (TC)n Simple_repeat Simple_repeat 1 45 0 2 1330 988 45 0 7 chrX 97668716 97668851 -68981445 + B1_Mm SINE Alu 13 146 -1 2 1330 225 0 0 0 chrX 97668859 97668884 -68981412 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1330 617 260 92 15 chrX 97668902 97669097 -68981199 + B3 SINE B2 2 211 -5 2 1330 272 237 205 0 chrX 97669637 97669752 -68980544 - MIRm SINE MIR -2 260 105 2 1330 214 326 0 59 chrX 97672537 97672638 -68977658 - MIR3 SINE MIR -5 203 109 2 1330 267 122 0 0 chrX 97672803 97672852 -68977444 + (A)n Simple_repeat Simple_repeat 1 49 0 2 1330 351 344 21 14 chrX 97672968 97673150 -68977146 + MIR SINE MIR 40 222 -46 2 1330 545 248 116 0 chrX 97673438 97673567 -68976729 - RSINE1 SINE B4 -21 144 1 2 1330 3583 38 2 0 chrX 97673830 97674254 -68976042 + L1Md_A LINE L1 6157 6581 -1 2 1330 187 350 114 48 chrX 97674875 97675085 -68975211 + L2c LINE L2 2910 3133 -254 2 1330 265 274 133 73 chrX 97675231 97675396 -68974900 - MIRb SINE MIR -16 252 78 2 1330 196 324 32 63 chrX 97676334 97676555 -68973741 - L2a LINE L2 -303 3123 2910 2 1330 21 0 0 0 chrX 97676761 97676782 -68973514 + AT_rich Low_complexity Low_complexity 1 21 0 2 1330 504 290 24 24 chrX 97676837 97677003 -68973293 + B3A SINE B2 25 190 -8 3 1330 322 200 128 20 chrX 97677063 97677165 -68973131 + L1MD1 LINE L1 5050 5162 -984 3 1330 639 255 14 0 chrX 97677176 97677317 -68972979 + B1_Mur1 SINE Alu 5 147 -2 3 1330 1045 236 30 140 chrX 97677344 97677393 -68972903 + L1MD1 LINE L1 5657 5702 -657 3 1330 1212 108 47 26 chrX 97677393 97677584 -68972712 - B2_Mm2 SINE B2 0 195 1 3 1330 1073 235 21 134 chrX 97677584 97677819 -68972477 + L1MD1 LINE L1 5703 5925 -434 3 1330 2832 176 18 35 chrX 97677819 97678366 -68971930 - Lx5 LINE L1 0 7050 6513 3 1330 1073 235 21 134 chrX 97678366 97678413 -68971883 + L1MD1 LINE L1 5926 5962 -280 3 1330 1160 74 0 20 chrX 97678413 97678564 -68971732 + B1_Mus1 SINE Alu 1 148 0 3 1330 1073 235 21 134 chrX 97678564 97678669 -68971627 + L1MD1 LINE L1 5963 6046 -196 3 1330 325 324 95 0 chrX 97678677 97678782 -68971514 + PB1 SINE Alu 11 125 -2 3 1330 352 271 11 0 chrX 97678791 97678898 -68971398 + ID4_ SINE ID 2 111 -41 3 1330 2396 178 6 66 chrX 97678975 97679475 -68970821 - RLTR18B LTR ERVK 0 512 43 3 1330 302 295 0 62 chrX 97679498 97679610 -68970686 + L1MD1 LINE L1 6124 6228 -131 3 1330 23 33 0 0 chrX 97680220 97680250 -68970046 + AT_rich Low_complexity Low_complexity 1 30 0 3 1330 211 391 11 0 chrX 97680360 97680447 -68969849 - MIR SINE MIR -63 145 58 3 1330 1197 223 39 57 chrX 97681095 97681484 -68968812 + RLTR14 LTR ERV1 1 382 0 3 1330 183 184 0 0 chrX 97681567 97681605 -68968691 + A-rich Low_complexity Low_complexity 1 38 0 3 1330 873 105 0 0 chrX 97681999 97682152 -68968144 + (TC)n Simple_repeat Simple_repeat 1 153 0 3 1330 230 255 0 0 chrX 97682214 97682265 -68968031 + MIRm SINE MIR 213 263 -13 3 1330 705 243 53 0 chrX 97682288 97682457 -68967839 + MTD LTR MaLR 40 217 -202 3 1330 266 248 137 46 chrX 97682604 97682735 -68967561 + MIR SINE MIR 2 144 -118 3 1330 207 288 117 52 chrX 97682888 97683042 -68967254 - L2c LINE L2 -43 3344 3181 3 1330 1307 227 42 7 chrX 97683162 97683450 -68966846 - MTD LTR MaLR 0 419 122 3 1330 1499 148 42 4 chrX 97683451 97683716 -68966580 + Lx2 LINE L1 6723 6997 0 3 1330 644 175 0 0 chrX 97683777 97683897 -68966399 - MTD LTR MaLR -299 120 1 3 1330 368 197 0 0 chrX 97683908 97683974 -68966322 + PB1D10 SINE Alu 23 88 -29 3 1330 930 296 73 38 chrX 97684803 97685283 -68965013 - RMER5 LTR ERV1 -4 530 34 3 1330 24 0 0 0 chrX 97685476 97685500 -68964796 + AT_rich Low_complexity Low_complexity 1 24 0 3 1330 555 16 0 0 chrX 97686592 97686656 -68963640 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 1330 424 295 0 32 chrX 97686660 97686786 -68963510 - B3A SINE B2 -37 161 40 3 1330 374 311 60 96 chrX 97686990 97687157 -68963139 + RSINE1 SINE B4 2 162 -3 3 1330 3140 53 5 10 chrX 97687553 97687949 -68962347 - MTA_Mm LTR MaLR -2 394 1 3 1330 577 296 32 26 chrX 97687950 97688106 -68962190 + RSINE1 SINE B4 9 165 0 3 1330 488 265 60 71 chrX 97688173 97688356 -68961940 + ID_B1 SINE B4 2 182 -42 3 1330 249 258 32 63 chrX 97688281 97688376 -68961920 + PB1D10 SINE Alu 24 115 -2 3 1330 607 214 226 0 chrX 97688478 97688646 -68961650 + ID_B1 SINE B4 12 217 -7 3 1330 292 248 127 7 chrX 97688639 97688781 -68961515 - MER33 DNA MER1_type -130 194 36 3 1330 290 67 22 0 chrX 97690575 97690620 -68959676 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1330 277 273 149 34 chrX 97691495 97691643 -68958653 + MIRb SINE MIR 59 223 -45 3 1330 204 366 38 32 chrX 97691673 97691831 -68958465 + MIR SINE MIR 15 173 -89 3 1330 292 206 247 43 chrX 97691844 97692006 -68958290 + Lx8 LINE L1 7279 7473 0 3 1330 196 325 147 17 chrX 97692033 97692149 -68958147 - L2 LINE L2 -939 2480 2350 3 1330 258 285 169 8 chrX 97692163 97692287 -68958009 - L2a LINE L2 -5 3421 3278 3 1330 437 240 197 10 chrX 97692703 97692998 -68957298 - L1ME4a LINE L1 -5 6119 5770 3 1330 188 67 33 0 chrX 97693056 97693086 -68957210 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1330 309 244 18 15 chrX 97693485 97693576 -68956720 - ID4_ SINE ID -34 118 24 3 1330 262 383 38 5 chrX 97693624 97693834 -68956462 + L2b LINE L2 2493 2709 -710 3 1330 350 331 107 82 chrX 97693910 97694275 -68956021 + L2b LINE L2 2987 3360 -15 3 1330 295 282 0 0 chrX 97694552 97694623 -68955673 + ID4_ SINE ID 13 83 0 3 1330 198 268 97 25 chrX 97695367 97695495 -68954801 + MIRb SINE MIR 2 142 -126 3 1330 283 282 123 27 chrX 97695516 97695662 -68954634 - MIRb SINE MIR -45 223 64 3 1330 28 0 0 0 chrX 97696290 97696318 -68953978 + AT_rich Low_complexity Low_complexity 1 28 0 3 1330 1199 61 0 0 chrX 97696320 97696468 -68953828 - B1_Mus1 SINE Alu 0 148 1 3 1330 188 379 87 16 chrX 97697471 97697723 -68952573 + L2a LINE L2 3046 3315 -111 3 1330 246 158 0 0 chrX 97698636 97698674 -68951622 + PB1 SINE Alu 27 64 -63 3 1330 230 258 0 16 chrX 97698674 97698699 -68951597 + ID_B1 SINE B4 108 169 -55 3 1330 216 329 71 0 chrX 97698749 97698819 -68951477 + ID2 SINE ID 5 79 -4 3 1330 1029 40 0 0 chrX 97700084 97700210 -68950086 + (TC)n Simple_repeat Simple_repeat 1 126 0 3 1330 403 276 0 31 chrX 97700255 97700352 -68949944 + RSINE1 SINE B4 37 130 -35 3 1330 317 236 0 61 chrX 97701653 97701752 -68948544 + L1MEb LINE L1 143 235 -5901 3 1330 647 270 88 26 chrX 97701808 97702002 -68948294 + B4A SINE B4 81 286 -6 3 1330 278 215 0 170 chrX 97702167 97702279 -68948017 - RMER10A LTR ERVL -25 417 325 3 1330 240 143 0 0 chrX 97702353 97702395 -68947901 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1330 381 175 88 41 chrX 97702400 97702631 -68947665 + L1MC LINE L1 5222 5483 -850 3 1330 27 0 0 0 chrX 97702718 97702745 -68947551 + AT_rich Low_complexity Low_complexity 1 27 0 3 1330 237 197 91 0 chrX 97702868 97702934 -68947362 + L1MEb LINE L1 2469 2540 -3606 3 1330 317 209 221 15 chrX 97703417 97703553 -68946743 + L1MD LINE L1 2638 2801 -3345 3 1330 1154 131 89 28 chrX 97703883 97704096 -68946200 - URR1A DNA MER1_type 0 226 1 3 1330 907 303 43 43 chrX 97704146 97704608 -68945688 + L1ME3A LINE L1 5699 6160 -13 3 1330 356 275 69 0 chrX 97705443 97705574 -68944722 + B1F SINE Alu 1 140 -9 3 1330 238 26 25 25 chrX 97705860 97705900 -68944396 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 3 1330 1218 48 0 0 chrX 97705900 97706047 -68944249 - B1_Mus2 SINE Alu 0 147 1 3 1330 331 68 16 48 chrX 97706162 97706224 -68944072 + B1_Mur3 SINE Alu 90 149 0 3 1330 274 188 72 36 chrX 97706967 97707050 -68943246 + L1MC5 LINE L1 6637 6722 -1239 3 1330 328 276 34 17 chrX 97707523 97707641 -68942655 - L1MA6 LINE L1 -4 6296 6177 3 1330 368 184 15 0 chrX 97707658 97707735 -68942561 + L1M1 LINE L1 5593 5678 -496 3 1330 299 272 12 0 chrX 97707755 97707836 -68942460 - ID4_ SINE ID 0 83 2 3 1330 2123 247 56 102 chrX 97707836 97708405 -68941891 - L1MA6 LINE L1 -161 6139 5592 3 1330 1284 20 0 0 chrX 97708405 97708552 -68941744 - B1_Mm SINE Alu 0 147 1 3 1330 2123 213 47 78 chrX 97708552 97709061 -68941235 - L1MA6 LINE L1 -709 5591 5092 3 1330 468 261 0 35 chrX 97709061 97709176 -68941120 + RSINE1 SINE B4 10 120 -45 3 1330 858 274 73 5 chrX 97709245 97709555 -68940741 - L1MA6 LINE L1 -1056 5090 4762 3 1330 180 111 0 0 chrX 97709557 97709584 -68940712 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 1330 1062 211 84 38 chrX 97709630 97709891 -68940405 - B4A SINE B4 -19 273 1 3 1330 584 251 55 109 chrX 97710226 97710427 -68939869 + B3 SINE B2 1 190 -5 3 1330 342 258 142 0 chrX 97711620 97711740 -68938556 + B1F SINE Alu 13 149 0 3 1330 512 196 0 0 chrX 97711644 97711741 -68938555 + ID_B1 SINE B4 124 220 -4 3 1330 217 245 104 38 chrX 97713423 97713529 -68936767 - MIRb SINE MIR -71 197 85 3 1330 258 254 183 0 chrX 97713627 97713698 -68936598 + PB1D10 SINE Alu 15 98 -19 3 1330 509 255 28 7 chrX 97713711 97713853 -68936443 + ID_B1 SINE B4 80 224 0 3 1330 462 248 32 16 chrX 97714487 97714610 -68935686 - PB1 SINE Alu -2 125 1 3 1330 423 0 0 0 chrX 97714618 97714665 -68935631 + (TTGG)n Simple_repeat Simple_repeat 1 47 0 3 1330 1154 102 0 0 chrX 97714665 97714812 -68935484 - B1_Mus1 SINE Alu 0 148 2 3 1330 225 238 48 0 chrX 97714843 97714906 -68935390 + L1MC5 LINE L1 7708 7773 -188 3 1330 216 0 0 0 chrX 97714975 97714999 -68935297 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 1330 258 311 99 42 chrX 97715214 97715405 -68934891 - MIRb SINE MIR -29 239 38 3 1330 187 323 31 41 chrX 97716850 97716947 -68933349 - L2c LINE L2 -202 3185 3090 3 1330 444 274 0 0 chrX 97717054 97717160 -68933136 - PB1D7 SINE Alu -14 106 1 3 1330 644 267 0 0 chrX 97718094 97718240 -68932056 - ID_B1 SINE B4 -1 223 78 3 1330 529 137 365 32 chrX 97718326 97718438 -68931858 - Lx9 LINE L1 -1 7643 7518 3 1330 195 69 0 0 chrX 97718438 97718467 -68931829 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 1330 529 137 365 32 chrX 97718467 97718543 -68931753 - Lx9 LINE L1 -127 7517 7394 3 1330 658 210 35 0 chrX 97718990 97719133 -68931163 + B1_Mus1 SINE Alu 1 148 0 3 1330 315 344 23 0 chrX 97719427 97719555 -68930741 - MIR SINE MIR -30 232 102 3 1330 580 341 8 59 chrX 97720873 97721228 -68929068 + Charlie4a DNA MER1_type 1 337 -171 3 1330 924 56 0 0 chrX 97721321 97721447 -68928849 - B1_Mus1 SINE Alu -1 147 22 3 1330 220 132 0 0 chrX 97721446 97721484 -68928812 + PB1D9 SINE Alu 32 69 -51 3 1330 400 275 70 45 chrX 97721476 97721632 -68928664 + RSINE1 SINE B4 6 165 0 3 1330 618 207 21 49 chrX 97721701 97721843 -68928453 + B1F SINE Alu 1 138 -11 3 1330 1254 95 0 0 chrX 97721868 97722047 -68928249 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 3 1330 1783 270 72 38 chrX 97722534 97723320 -68926976 - L1MB3 LINE L1 -1 6182 5370 3 1330 207 0 0 0 chrX 97724373 97724396 -68925900 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1330 1171 62 7 0 chrX 97724748 97724894 -68925402 + B1_Mm SINE Alu 1 147 0 4 1330 288 0 0 0 chrX 97724976 97725008 -68925288 + (TTG)n Simple_repeat Simple_repeat 2 33 0 4 1330 342 239 257 0 chrX 97725132 97725245 -68925051 + B1F1 SINE Alu 3 144 -5 4 1330 513 0 0 0 chrX 97726351 97726408 -68923888 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1330 223 319 0 0 chrX 97726441 97726488 -68923808 - B1F1 SINE Alu -102 47 1 4 1330 182 270 16 16 chrX 97726904 97726968 -68923328 + MIR SINE MIR 176 239 -23 4 1330 240 208 0 0 chrX 97727035 97727083 -68923213 + MIRc SINE MIR 109 156 -112 4 1330 224 369 47 62 chrX 97727749 97728024 -68922272 - L2b LINE L2 -98 3289 3026 4 1330 343 304 0 10 chrX 97728562 97728665 -68921631 - L2b LINE L2 -244 3131 3030 4 1330 231 218 0 52 chrX 97728817 97728875 -68921421 - B1F2 SINE Alu -92 57 3 4 1330 257 250 0 0 chrX 97728827 97728883 -68921413 - B4 SINE B4 -157 135 80 4 1330 22 0 0 0 chrX 97729236 97729258 -68921038 + AT_rich Low_complexity Low_complexity 1 22 0 4 1330 718 274 134 20 chrX 97729268 97729521 -68920775 + B4A SINE B4 1 282 -10 4 1330 187 73 23 47 chrX 97729979 97730022 -68920274 + (CAGA)n Simple_repeat Simple_repeat 3 44 0 4 1330 2131 263 98 65 chrX 97730168 97730759 -68919537 + L1M3 LINE L1 3005 3583 -2557 4 1330 761 130 87 0 chrX 97730759 97730897 -68919399 - B1_Mur4 SINE Alu 0 150 1 4 1330 2131 263 98 65 chrX 97730897 97731535 -68918761 + L1M3 LINE L1 3584 4274 -1866 4 1330 342 250 0 0 chrX 97732078 97732146 -68918150 + ID4_ SINE ID 5 72 -11 4 1330 291 28 0 0 chrX 97732222 97732258 -68918038 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1330 237 280 86 31 chrX 97732546 97732708 -68917588 + L1MD LINE L1 5162 5332 -814 4 1330 815 67 198 8 chrX 97732780 97732901 -68917395 + B1_Mus2 SINE Alu 2 145 -2 4 1330 341 231 0 13 chrX 97732909 97732988 -68917308 + ID_B1 SINE B4 143 220 -4 4 1330 332 328 8 39 chrX 97733054 97733181 -68917115 + PB1 SINE Alu 3 125 -2 4 1330 350 219 13 27 chrX 97733214 97733289 -68917007 + ID4_ SINE ID 9 82 -1 4 1330 498 276 15 30 chrX 97733577 97733708 -68916588 - ID_B1 SINE B4 -8 216 88 4 1330 261 0 0 0 chrX 97734078 97734107 -68916189 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1330 240 35 0 0 chrX 97734210 97734239 -68916057 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 1330 634 225 36 7 chrX 97734247 97734386 -68915910 - B1_Mur3 SINE Alu -6 143 1 4 1330 257 247 40 0 chrX 97734490 97734567 -68915729 + ID4 SINE ID 5 88 -64 4 1330 975 71 71 0 chrX 97734978 97735105 -68915191 + B1_Mus1 SINE Alu 2 137 -11 4 1330 420 37 0 0 chrX 97735106 97735160 -68915136 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 4 1330 1236 97 11 26 chrX 97735579 97735769 -68914527 + B2_Mm2 SINE B2 1 187 -8 4 1330 261 0 0 0 chrX 97736958 97736987 -68913309 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 1330 369 0 0 0 chrX 97736987 97737027 -68913269 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 1330 24 0 0 0 chrX 97737431 97737455 -68912841 + AT_rich Low_complexity Low_complexity 1 24 0 4 1330 444 287 154 42 chrX 97738624 97738930 -68911366 + L2a LINE L2 2635 2974 -445 4 1330 234 345 55 0 chrX 97738934 97739044 -68911252 + L2a LINE L2 3310 3425 -1 4 1330 407 260 9 9 chrX 97739185 97739290 -68911006 + PB1D10 SINE Alu 1 105 -12 4 1330 411 210 12 0 chrX 97739308 97739389 -68910907 + ID4_ SINE ID 2 83 0 4 1330 221 326 65 11 chrX 97741868 97741961 -68908335 - MIRc SINE MIR -152 116 19 4 1330 495 0 0 0 chrX 97741961 97742016 -68908280 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1330 496 286 89 5 chrX 97742090 97742344 -68907952 + L1M4 LINE L1 5316 5601 -567 4 1330 1109 192 19 0 chrX 97742344 97742558 -68907738 + MTD LTR MaLR 3 220 -199 4 1330 273 238 16 0 chrX 97742769 97742832 -68907464 + ID4_ SINE ID 7 70 -13 4 1330 407 304 112 34 chrX 97742875 97743311 -68906985 - L1MD2 LINE L1 -96 6263 5879 4 1330 14783 73 11 13 chrX 97743396 97745551 -68904745 - L1VL2 LINE L1 -627 2988 829 4 1330 7671 35 1 0 chrX 97745773 97746664 -68903632 - L1Md_F2 LINE L1 -12 6570 5679 4 1330 4906 121 25 88 chrX 97746664 97746726 -68903570 - L1VL2 LINE L1 -5450 885 826 4 1330 1460 77 0 25 chrX 97746726 97746926 -68903370 - B2_Mm2 SINE B2 0 195 1 4 1330 4906 121 25 88 chrX 97746926 97746940 -68903356 - L1VL2 LINE L1 -5510 825 798 4 1330 490 45 0 0 chrX 97746940 97747007 -68903289 - L1Md_F3 LINE L1 -14 6570 6504 4 1330 4906 121 25 88 chrX 97747007 97747846 -68902450 - L1VL2 LINE L1 -5538 797 29 4 1330 331 250 114 23 chrX 97747845 97747976 -68902320 - L1MD2 LINE L1 -473 5886 5744 4 1330 230 147 63 51 chrX 97748008 97748087 -68902209 - Lx4B LINE L1 -45 7013 6934 4 1330 527 239 20 92 chrX 97748095 97748247 -68902049 - B1F1 SINE Alu -8 141 1 4 1330 552 207 139 8 chrX 97748382 97748504 -68901792 - B1_Mur1 SINE Alu -6 143 6 4 1330 624 272 110 60 chrX 97748538 97748855 -68901441 - MLT1D LTR MaLR -78 427 95 4 1330 450 0 0 0 chrX 97748856 97748906 -68901390 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1330 677 196 0 61 chrX 97748913 97749060 -68901236 - B3A SINE B2 -59 139 2 4 1330 32 67 0 0 chrX 97749079 97749139 -68901157 + AT_rich Low_complexity Low_complexity 1 60 0 4 1330 581 269 56 12 chrX 97749147 97749309 -68900987 + B3 SINE B2 48 216 0 4 1330 512 248 0 9 chrX 97749426 97749536 -68900760 + Lx8 LINE L1 7018 7126 -347 4 1330 261 0 0 0 chrX 97749687 97749716 -68900580 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1330 1089 217 70 29 chrX 97749763 97750076 -68900220 - Lx3C LINE L1 -1 7057 6639 4 1330 558 229 43 96 chrX 97750262 97750470 -68899826 - B3A SINE B2 -1 197 1 4 1330 317 286 85 3 chrX 97750982 97751092 -68899204 - B4A SINE B4 -96 196 81 4 1330 369 86 0 0 chrX 97751101 97751159 -68899137 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 4 1330 817 134 6 113 chrX 97751159 97751319 -68898977 - B1_Mur4 SINE Alu -6 144 1 4 1330 200 299 20 112 chrX 97752311 97752409 -68897887 - L2a LINE L2 0 3426 3299 4 1330 268 269 40 56 chrX 97753206 97753332 -68896964 - L1MC5 LINE L1 -534 7427 7304 4 1330 660 26 0 0 chrX 97753421 97753499 -68896797 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 4 1330 522 287 7 7 chrX 97753499 97753628 -68896668 - ID_B1 SINE B4 -8 216 87 4 1330 865 69 32 3 chrX 97753689 97753833 -68896463 + B1_Mm SINE Alu 4 148 0 4 1330 233 98 0 24 chrX 97753834 97753876 -68896420 + (TAAAA)n Simple_repeat Simple_repeat 2 42 0 4 1330 227 279 9 55 chrX 97754089 97754199 -68896097 + (TATATG)n Simple_repeat Simple_repeat 3 107 0 4 1330 407 248 16 66 chrX 97754268 97754389 -68895907 + PB1D10 SINE Alu 3 117 0 4 1330 315 0 0 0 chrX 97755471 97755506 -68894790 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 4 1330 835 177 7 20 chrX 97755520 97755670 -68894626 - B1_Mus1 SINE Alu 0 148 1 4 1330 766 276 32 0 chrX 97755670 97755891 -68894405 - B4A SINE B4 -63 229 2 4 1330 2560 69 0 15 chrX 97756185 97756525 -68893771 - L1Md_F2 LINE L1 0 6582 6248 4 1330 198 103 0 0 chrX 97756584 97756613 -68893683 + (CAT)n Simple_repeat Simple_repeat 2 30 0 4 1330 7138 83 10 8 chrX 97756613 97757587 -68892709 - L1_Mus3 LINE L1 -19 6619 5644 4 1330 3716 97 2 2 chrX 97757586 97758097 -68892199 + Lx6 LINE L1 5162 5677 -1783 4 1330 195 179 0 0 chrX 97758251 97758290 -68892006 - L2b LINE L2 -14 3361 3323 4 1330 387 314 53 55 chrX 97758338 97758702 -68891594 + ORR1E LTR MaLR 1 379 0 4 1330 606 301 103 0 chrX 97758713 97758916 -68891380 + Tigger5 DNA MER2_type 20 243 -2163 4 1330 1275 65 32 0 chrX 97759700 97759845 -68890451 - B2_Mm1t SINE B2 0 193 49 4 1330 5909 15 0 0 chrX 97759845 97760503 -68889793 - L1Md_A LINE L1 0 6582 5925 4 1330 1275 65 32 0 chrX 97760503 97760543 -68889753 - B2_Mm1t SINE B2 -145 48 4 4 1330 1305 134 0 0 chrX 97760875 97761054 -68889242 + Lx4A LINE L1 6754 6932 -126 4 1330 336 48 0 0 chrX 97761864 97761906 -68888390 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 4 1330 657 171 46 8 chrX 97761940 97762070 -68888226 + ID_B1 SINE B4 84 218 -6 4 1330 249 122 39 39 chrX 97762027 97762078 -68888218 + PB1D10 SINE Alu 67 117 0 4 1330 347 0 23 0 chrX 97762573 97762616 -68887680 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1330 292 202 292 35 chrX 97762928 97763041 -68887255 + ID_B1 SINE B4 74 215 -9 4 1330 317 245 41 41 chrX 97762951 97763049 -68887247 + PB1D10 SINE Alu 18 115 -2 4 1330 999 86 153 0 chrX 97763055 97763218 -68887078 + B2_Mm2 SINE B2 4 191 -4 4 1330 424 269 76 121 chrX 97763220 97763444 -68886852 + B3 SINE B2 3 216 0 4 1330 471 223 61 0 chrX 97763449 97763576 -68886720 + B1_Mur2 SINE Alu 4 141 -8 4 1330 327 298 58 26 chrX 97763820 97763975 -68886321 - MIRb SINE MIR -12 256 97 4 1330 23 23 0 44 chrX 97764211 97764233 -68886063 + AT_rich Low_complexity Low_complexity 1 22 0 4 1330 1303 171 0 5 chrX 97764233 97764445 -68885851 - B3 SINE B2 -5 211 1 4 1330 23 23 0 44 chrX 97764445 97764467 -68885829 + AT_rich Low_complexity Low_complexity 1 21 0 4 1330 248 309 0 0 chrX 97765397 97765465 -68884831 + ID4_ SINE ID 5 72 -11 4 1330 500 261 25 8 chrX 97765614 97765734 -68884562 + RSINE1 SINE B4 3 124 -41 4 1330 423 0 0 0 chrX 97765734 97765781 -68884515 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1330 259 295 16 74 chrX 97765792 97765913 -68884383 + PB1 SINE Alu 14 127 0 5 1330 370 268 42 48 chrX 97765929 97766094 -68884202 + L1MD3 LINE L1 7824 7987 -8 5 1330 230 318 57 71 chrX 97766206 97766353 -68883943 + L1ME3B LINE L1 6029 6182 -58 5 1330 300 83 0 0 chrX 97766353 97766401 -68883895 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 5 1330 860 35 200 0 chrX 97766401 97766516 -68883780 - B1_Mm SINE Alu -9 138 1 5 1330 230 318 57 71 chrX 97766516 97766577 -68883719 + L1ME3B LINE L1 6183 6234 -6 5 1330 1347 68 0 28 chrX 97766602 97766783 -68883513 + B2_Mm2 SINE B2 2 177 -18 5 1330 477 122 0 0 chrX 97767050 97767124 -68883172 + (TTG)n Simple_repeat Simple_repeat 2 75 0 5 1330 214 300 88 0 chrX 97768202 97768282 -68882014 - PB1D7 SINE Alu -33 87 1 5 1330 852 51 0 0 chrX 97769550 97769668 -68880628 + B1_Mus1 SINE Alu 1 118 -30 5 1330 417 39 0 0 chrX 97769675 97769726 -68880570 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 5 1330 331 340 96 24 chrX 97770367 97770575 -68879721 + MIR SINE MIR 21 243 -19 5 1330 198 0 0 0 chrX 97771169 97771191 -68879105 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 5 1330 260 274 14 0 chrX 97771438 97771511 -68878785 + ID4 SINE ID 1 74 -9 5 1330 426 121 0 0 chrX 97771513 97771579 -68878717 + (TAA)n Simple_repeat Simple_repeat 3 68 0 5 1330 224 234 0 0 chrX 97771678 97771725 -68878571 - PB1D10 SINE Alu -26 91 45 5 1330 259 241 86 0 chrX 97771990 97772102 -68878194 + MIR SINE MIR 7 127 -81 5 1330 1344 289 50 9 chrX 97773542 97774006 -68876290 - L1MB8 LINE L1 -15 6163 5681 5 1330 1148 48 0 14 chrX 97774092 97774240 -68876056 + B1_Mus1 SINE Alu 3 148 0 5 1330 1040 206 4 86 chrX 97774417 97774661 -68875635 - ID_B1 SINE B4 0 224 1 5 1330 777 241 31 16 chrX 97774707 97774901 -68875395 + B3A SINE B2 1 197 -1 5 1330 2459 118 56 11 chrX 97775091 97775468 -68874828 - ORR1B1 LTR MaLR 0 394 1 5 1330 1688 277 97 39 chrX 97775953 97776570 -68873726 - Lx8 LINE L1 -2 7471 6819 5 1330 4930 41 8 2 chrX 97776985 97777575 -68872721 + L1Md_F2 LINE L1 5989 6582 0 5 1330 5405 77 13 1 chrX 97777722 97778437 -68871859 + L1_Mus1 LINE L1 5845 6567 0 5 1330 374 277 75 23 chrX 97778679 97778812 -68871484 + B1F SINE Alu 10 149 0 5 1330 310 318 61 0 chrX 97778899 97779031 -68871265 + L1MD3 LINE L1 6878 7017 -978 5 1330 22 115 0 0 chrX 97779047 97779160 -68871136 + AT_rich Low_complexity Low_complexity 1 113 0 5 1330 227 318 0 0 chrX 97779243 97779306 -68870990 + L1MD3 LINE L1 7353 7415 -580 5 1330 201 39 0 0 chrX 97779339 97779365 -68870931 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 1330 1015 243 16 20 chrX 97779365 97779617 -68870679 - Lx6 LINE L1 -128 7332 7082 5 166 3166 153 109 11 chrX 97779621 97779980 -68870316 + L1_Mur3 LINE L1 4837 5225 -655 5 1331 369 0 0 0 chrX 97779980 97780021 -68870275 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 1331 3166 153 109 11 chrX 97780021 97780310 -68869986 + L1_Mur3 LINE L1 5226 5548 -332 5 1331 222 37 0 0 chrX 97780833 97780860 -68869436 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 5 1331 423 0 0 0 chrX 97781129 97781176 -68869120 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1331 1351 105 10 10 chrX 97781472 97781674 -68868622 + L1_Mur3 LINE L1 5537 5738 -139 5 1331 300 0 0 0 chrX 97782301 97782341 -68867955 + L1_Mus2 LINE L1 6526 6565 -1 5 1331 559 229 131 0 chrX 97782492 97782614 -68867682 + B1_Mur2 SINE Alu 2 139 -10 5 1331 198 71 0 0 chrX 97782614 97782642 -68867654 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 5 1331 740 232 25 1 chrX 97782644 97782805 -68867491 + B3A SINE B2 1 160 -56 5 1331 387 0 0 0 chrX 97782805 97782848 -68867448 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1331 639 277 21 37 chrX 97782848 97782877 -68867419 + B3 SINE B2 161 188 -28 5 1331 286 340 40 20 chrX 97783261 97783411 -68866885 - MIRb SINE MIR -39 229 77 5 1331 386 335 31 36 chrX 97783780 97783972 -68866324 - MIRc SINE MIR -76 192 2 5 1331 569 111 0 10 chrX 97784120 97784220 -68866076 + L1_Mus3 LINE L1 6540 6638 0 5 1331 182 286 37 61 chrX 97785155 97785237 -68865059 + MIR3 SINE MIR 97 176 -32 5 1331 1044 44 0 0 chrX 97785937 97786072 -68864224 + B1_Mus1 SINE Alu 14 148 0 5 1331 337 66 16 16 chrX 97786072 97786134 -68864162 + (CAAA)n Simple_repeat Simple_repeat 3 64 0 5 1331 370 324 9 9 chrX 97786182 97786294 -68864002 - PB1D10 SINE Alu -1 116 5 5 1331 27 29 0 0 chrX 97786457 97786491 -68863805 + AT_rich Low_complexity Low_complexity 1 34 0 5 1331 375 295 0 143 chrX 97786866 97787020 -68863276 + B1_Mur3 SINE Alu 3 134 -15 5 1331 385 250 0 0 chrX 97790291 97790379 -68859917 - MIR3 SINE MIR -13 195 108 5 1331 324 335 57 0 chrX 97790595 97790753 -68859543 - MIR SINE MIR 0 262 96 5 1331 259 267 200 22 chrX 97790878 97791058 -68859238 - L2a LINE L2 -10 3416 3205 5 1331 460 274 229 6 chrX 97791123 97791442 -68858854 - L2a LINE L2 -472 2947 2558 5 1331 1207 61 0 0 chrX 97791442 97791590 -68858706 + B1_Mus1 SINE Alu 1 148 0 5 1331 326 228 18 90 chrX 97791642 97791753 -68858543 + PB1D10 SINE Alu 15 117 0 5 1331 359 296 68 0 chrX 97791753 97791915 -68858381 - L2a LINE L2 -853 2566 2394 5 1331 352 260 129 8 chrX 97792572 97792696 -68857600 + MIRb SINE MIR 25 163 -105 5 1331 254 267 137 10 chrX 97793417 97793519 -68856777 - PB1D10 SINE Alu 0 117 3 5 1331 708 88 0 0 chrX 97793577 97793691 -68856605 + (TC)n Simple_repeat Simple_repeat 1 114 0 5 1331 249 33 0 0 chrX 97793691 97793720 -68856576 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 1331 709 212 67 52 chrX 97793767 97793961 -68856335 + B3A SINE B2 2 198 0 5 1331 348 189 0 0 chrX 97794508 97794582 -68855714 + GA-rich Low_complexity Low_complexity 2 75 0 5 1331 669 209 15 0 chrX 97794988 97795122 -68855174 - B1F SINE Alu -13 136 1 5 1331 802 274 4 26 chrX 97795257 97795486 -68854810 + Lx8 LINE L1 7001 7224 -249 5 1331 225 362 0 0 chrX 97795497 97795577 -68854719 + RMER15 LTR ERVL 371 450 -125 5 1331 872 297 136 15 chrX 97795771 97796167 -68854129 - MLT1L LTR MaLR -14 596 153 5 1331 1038 268 80 96 chrX 97796597 97796926 -68853370 - MLT1D LTR MaLR -1 504 194 5 1331 916 155 7 0 chrX 97796926 97797068 -68853228 - B1_Mur1 SINE Alu -2 147 5 5 1331 1038 268 80 96 chrX 97797068 97797250 -68853046 - MLT1D LTR MaLR -312 193 1 5 1331 469 280 19 0 chrX 97797295 97797402 -68852894 + PB1D10 SINE Alu 3 111 -6 5 1331 180 0 0 0 chrX 97797990 97798010 -68852286 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1331 4077 68 11 17 chrX 97798016 97798557 -68851739 - L1Md_F2 LINE L1 0 6582 6045 5 1331 642 184 0 0 chrX 97798782 97798891 -68851405 - PB1D9 SINE Alu -7 113 5 5 1331 2900 61 35 2 chrX 97799795 97800190 -68850106 - L1_Mus3 LINE L1 -3 6635 6228 5 1331 1096 199 119 91 chrX 97800222 97800652 -68849644 + RMER10A LTR ERVL 1 442 0 5 1331 834 56 0 0 chrX 97801648 97801756 -68848540 + (GA)n Simple_repeat Simple_repeat 1 108 0 5 1331 197 152 0 61 chrX 97803334 97803383 -68846913 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1331 272 164 0 15 chrX 97803386 97803454 -68846842 + GA-rich Low_complexity Low_complexity 1 67 0 5 1331 317 318 108 0 chrX 97803931 97804060 -68846236 + B1F1 SINE Alu 2 144 -5 5 1331 198 0 0 0 chrX 97804318 97804340 -68845956 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 1331 331 256 55 86 chrX 97804710 97804838 -68845458 + PB1 SINE Alu 2 125 -2 5 1331 485 153 15 0 chrX 97804871 97804960 -68845336 + B1_Mur1 SINE Alu 51 142 -7 5 1331 236 135 0 0 chrX 97805042 97805079 -68845217 + PB1D9 SINE Alu 43 79 -41 5 1331 366 323 30 30 chrX 97805459 97805593 -68844703 - B4 SINE B4 -148 144 11 5 1331 831 309 20 17 chrX 97805952 97806245 -68844051 - MLT1A1 LTR MaLR -2 406 113 5 1331 363 301 31 25 chrX 97806281 97806441 -68843855 - L1M5 LINE L1 -693 5547 5387 5 1331 342 0 0 0 chrX 97806499 97806537 -68843759 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1331 701 274 120 38 chrX 97806565 97806831 -68843465 - B4 SINE B4 -2 290 3 5 1331 757 243 0 7 chrX 97807758 97807907 -68842389 + B1_Mur1 SINE Alu 2 149 0 5 1331 656 331 66 16 chrX 97808349 97808668 -68841628 - MER58B DNA MER1_type -5 336 2 5 1331 225 0 0 0 chrX 97809546 97809571 -68840725 + (CTGGGG)n Simple_repeat Simple_repeat 1 25 0 5 1331 421 274 0 42 chrX 97810357 97810475 -68839821 + PB1D10 SINE Alu 5 117 0 5 1331 717 199 35 0 chrX 97810710 97810851 -68839445 + B1_Mus1 SINE Alu 3 148 0 5 1331 371 243 121 7 chrX 97810970 97811111 -68839185 - MIRb SINE MIR -90 178 22 5 1331 3029 185 80 36 chrX 97814274 97815001 -68835295 + Lx3B LINE L1 5117 5921 -1052 5 1331 329 198 29 59 chrX 97814984 97815086 -68835210 + Lx9 LINE L1 7523 7621 -23 5 1331 868 198 130 0 chrX 97815112 97815289 -68835007 - B3 SINE B2 -16 200 1 5 1331 357 322 90 39 chrX 97815364 97815519 -68834777 - RSINE1 SINE B4 0 165 3 5 1331 21 0 0 0 chrX 97815592 97815613 -68834683 + AT_rich Low_complexity Low_complexity 1 21 0 5 1331 1114 134 23 28 chrX 97815713 97815928 -68834368 - URR1A DNA MER1_type -11 215 2 5 1331 509 247 65 52 chrX 97815996 97816150 -68834146 - Lx8 LINE L1 -357 7116 6961 5 1331 878 263 29 57 chrX 97816250 97816303 -68833993 + B4A SINE B4 40 93 -199 5 1331 528 172 144 30 chrX 97816303 97816435 -68833861 + B1_Mur3 SINE Alu 2 148 -1 5 1331 878 263 29 57 chrX 97816435 97816627 -68833669 + B4A SINE B4 94 278 -14 5 1331 27 0 0 0 chrX 97816627 97816654 -68833642 + AT_rich Low_complexity Low_complexity 1 27 0 5 1331 344 316 0 0 chrX 97816686 97816784 -68833512 + PB1D10 SINE Alu 20 117 0 5 1331 715 167 50 14 chrX 97817116 97817256 -68833040 + B1_Mur3 SINE Alu 5 149 0 6 1331 207 100 0 0 chrX 97817287 97817317 -68832979 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 6 1331 517 281 26 19 chrX 97817399 97817555 -68832741 - RSINE1 SINE B4 -8 157 1 6 1331 554 66 70 1 chrX 97817973 97818074 -68832222 - B1_Mus1 SINE Alu -12 108 1 6 1331 334 233 8 77 chrX 97818074 97818112 -68832184 - MT2B LTR ERVL -443 158 130 6 1331 204 125 0 0 chrX 97818880 97818912 -68831384 + (A)n Simple_repeat Simple_repeat 1 32 0 6 1331 803 187 0 39 chrX 97819459 97819615 -68830681 - B1_Mur4 SINE Alu 0 150 1 6 1331 1964 58 0 0 chrX 97822353 97822611 -68827685 - MTA_Mm LTR MaLR -138 258 1 6 1331 373 272 0 42 chrX 97822612 97822708 -68827588 - ID_B1 SINE B4 -128 96 5 6 1331 567 302 123 77 chrX 97822825 97823345 -68826951 - L1MC4 LINE L1 -190 7852 7309 6 1331 208 135 0 0 chrX 97823478 97823515 -68826781 + (T)n Simple_repeat Simple_repeat 1 37 0 6 1331 870 44 0 0 chrX 97823515 97823629 -68826667 - B1_Mus2 SINE Alu 0 147 34 6 1331 3975 238 121 60 chrX 97823644 97825073 -68825223 - Lx9 LINE L1 -23 7621 6106 6 1331 497 214 106 9 chrX 97825274 97825387 -68824909 - B3A SINE B2 -74 124 1 6 1331 387 144 0 53 chrX 97825747 97825842 -68824454 + C-rich Low_complexity Low_complexity 2 91 0 6 1331 1081 44 73 0 chrX 97826151 97826287 -68824009 + B1_Mm SINE Alu 2 147 0 6 1331 1405 76 0 21 chrX 97826545 97826733 -68823563 + B2_Mm2 SINE B2 2 185 -10 6 1331 1053 50 0 14 chrX 97826889 97827032 -68823264 - B1_Mus2 SINE Alu -1 146 6 6 1331 212 186 0 23 chrX 97827108 97827152 -68823144 - PB1D10 SINE Alu -8 109 67 6 1331 635 218 13 53 chrX 97827159 97827309 -68822987 - B1_Mur2 SINE Alu -5 144 1 6 1331 2227 156 5 52 chrX 97827512 97827939 -68822357 - Lx4B LINE L1 -4 7054 6648 6 1331 1366 157 0 5 chrX 97828027 97828244 -68822052 - B3 SINE B2 0 216 1 6 1331 189 0 0 0 chrX 97828261 97828282 -68822014 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1331 1153 74 0 0 chrX 97828282 97828430 -68821866 - B1_Mus1 SINE Alu 0 148 1 6 1331 235 318 15 0 chrX 97828438 97828504 -68821792 - PB1D10 SINE Alu -49 68 2 6 1331 555 124 0 0 chrX 97828557 97828646 -68821650 - B1_Mus2 SINE Alu -17 130 42 6 1331 214 0 0 157 chrX 97828649 97828751 -68821545 + (CTCTG)n Simple_repeat Simple_repeat 5 90 0 6 1331 278 203 16 33 chrX 97828752 97828813 -68821483 - B1_Mur4 SINE Alu -90 60 1 6 1331 320 200 0 0 chrX 97829794 97829854 -68820442 - L2a LINE L2 -3 3423 3364 6 1331 22 35 0 0 chrX 97830193 97830222 -68820074 + AT_rich Low_complexity Low_complexity 1 29 0 6 1331 662 213 109 6 chrX 97830231 97830396 -68819900 - B3A SINE B2 -16 182 1 6 1331 216 163 0 0 chrX 97830773 97830816 -68819480 + C-rich Low_complexity Low_complexity 5 47 0 6 1331 219 229 64 103 chrX 97830834 97830912 -68819384 - ID4 SINE ID 0 83 9 6 1331 226 215 14 71 chrX 97830942 97831012 -68819284 - L1ME4a LINE L1 -82 6042 5977 6 1331 335 181 14 0 chrX 97831123 97831195 -68819101 + CT-rich Low_complexity Low_complexity 2 74 0 6 1331 424 291 90 32 chrX 97831430 97831618 -68818678 - MER3 DNA MER1_type -9 200 2 6 1331 584 285 14 0 chrX 97832245 97832389 -68817907 + RSINE1 SINE B4 3 148 -17 6 1331 1075 80 7 0 chrX 97834395 97834532 -68815764 + B1_Mm SINE Alu 1 138 -9 6 1331 207 0 0 0 chrX 97834532 97834555 -68815741 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1331 552 229 84 6 chrX 97834847 97835014 -68815282 - L1MB7 LINE L1 -19 6663 6484 6 1331 502 124 153 29 chrX 97835054 97835192 -68815104 - L1MB7 LINE L1 -280 6396 6251 6 1331 512 194 72 27 chrX 97835251 97835362 -68814934 - B1_Mur2 SINE Alu 0 149 34 6 1331 248 169 33 17 chrX 97835397 97835457 -68814839 - L1MB7 LINE L1 -529 6153 6093 6 1331 518 281 19 154 chrX 97835469 97835931 -68814365 - L1MB8 LINE L1 -54 6124 5725 6 1331 231 36 0 0 chrX 97835969 97835997 -68814299 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 6 1331 621 168 45 27 chrX 97836007 97836117 -68814179 - ID_B1 SINE B4 -23 201 90 6 1331 250 324 17 67 chrX 97836122 97836241 -68814055 + RMER12 LTR ERVK 739 851 -471 6 1331 344 284 0 87 chrX 97836224 97836351 -68813945 - RMER12 LTR ERVK -472 850 735 6 1331 536 188 125 0 chrX 97836331 97836427 -68813869 - B1_Mur3 SINE Alu -39 110 3 6 1331 1029 160 0 16 chrX 97836435 97836626 -68813670 - B2_Mm2 SINE B2 -6 189 2 6 1331 451 220 144 0 chrX 97836629 97836761 -68813535 - L1MB7 LINE L1 -692 5986 5836 6 1331 1304 269 161 31 chrX 97836774 97837780 -68812516 - L1MB7 LINE L1 -1142 5502 4366 6 1331 236 361 46 8 chrX 97837872 97838003 -68812293 - L1MB7 LINE L1 -5699 843 708 6 1331 1194 41 7 0 chrX 97838167 97838313 -68811983 - B1_Mus2 SINE Alu 0 147 1 6 1331 336 229 47 9 chrX 97838313 97838419 -68811877 - L1ME2z LINE L1 -28 6284 6175 6 1331 1361 144 105 52 chrX 97838421 97838707 -68811589 - ORR1C2 LTR MaLR 0 384 84 6 1331 231 228 35 17 chrX 97838746 97838804 -68811492 + PB1D10 SINE Alu 42 100 -17 6 1331 582 270 78 60 chrX 97838810 97839094 -68811202 + B4A SINE B4 1 289 -3 6 1331 268 100 0 24 chrX 97839330 97839371 -68810925 - ORR1C2 LTR MaLR -344 40 1 6 1331 2868 135 84 4 chrX 97839372 97839862 -68810434 - ORR1C2-int LTR MaLR -1 1508 980 6 1331 274 284 53 13 chrX 97839872 97839947 -68810349 - ID4_ SINE ID -4 79 2 6 1331 345 298 65 30 chrX 97839947 97840179 -68810117 - L1ME2z LINE L1 -571 5873 5634 6 1331 468 285 89 42 chrX 97840244 97840587 -68809709 - L1ME2z LINE L1 -627 5537 5164 6 1331 415 276 52 15 chrX 97840591 97840727 -68809569 - B1F1 SINE Alu -8 141 1 6 1331 978 53 0 0 chrX 97840747 97840880 -68809416 + (TG)n Simple_repeat Simple_repeat 2 134 0 6 1331 425 308 111 37 chrX 97840886 97841021 -68809275 - RSINE1 SINE B4 -17 148 4 6 1331 218 141 14 99 chrX 97841027 97841067 -68809229 + T-rich Low_complexity Low_complexity 28 66 0 6 1331 820 143 64 0 chrX 97841067 97841207 -68809089 - B1_Mur4 SINE Alu -1 149 1 6 1331 218 141 14 99 chrX 97841207 97841237 -68809059 + T-rich Low_complexity Low_complexity 2 27 0 6 1331 1162 43 0 0 chrX 97841240 97841381 -68808915 - B1_Mm SINE Alu 0 147 7 6 1331 517 303 79 14 chrX 97841388 97841666 -68808630 - L1ME2z LINE L1 -952 5194 4899 6 1331 1221 27 0 20 chrX 97841937 97842087 -68808209 - B1_Mus2 SINE Alu 0 147 1 6 1331 258 32 0 0 chrX 97842418 97842449 -68807847 + (T)n Simple_repeat Simple_repeat 1 31 0 6 1331 1200 48 7 0 chrX 97842459 97842605 -68807691 - B1_Mm SINE Alu 0 147 1 6 1331 575 139 10 0 chrX 97842697 97842798 -68807498 + (TTC)n Simple_repeat Simple_repeat 1 102 0 6 1331 435 211 0 59 chrX 97842827 97842928 -68807368 - B1_Mus2 SINE Alu -21 126 32 6 1331 781 183 188 6 chrX 97843163 97843178 -68807118 - B3 SINE B2 0 216 202 6 1331 261 0 0 0 chrX 97843178 97843207 -68807089 + (TTTTA)n Simple_repeat Simple_repeat 5 33 0 6 1331 781 183 188 6 chrX 97843207 97843372 -68806924 - B3 SINE B2 -15 201 4 6 1331 604 266 7 20 chrX 97843399 97843545 -68806751 + ID_B1 SINE B4 78 221 -3 6 1331 1142 42 42 0 chrX 97843827 97843969 -68806327 + B1_Mus1 SINE Alu 1 148 0 6 1331 308 184 262 37 chrX 97844072 97844236 -68806060 - L1M2 LINE L1 -2692 3451 3251 6 1331 296 244 31 113 chrX 97844671 97844731 -68805565 - L1MC5 LINE L1 -385 7576 7519 6 1331 418 232 8 59 chrX 97844731 97844850 -68805446 - PB1D10 SINE Alu 0 117 5 6 1331 296 244 31 113 chrX 97844850 97844983 -68805313 - L1MC5 LINE L1 -443 7518 7399 6 1331 1387 66 22 0 chrX 97845027 97845208 -68805088 - B2_Mm2 SINE B2 -9 186 2 6 1331 279 249 61 3 chrX 97846504 97846620 -68803676 - L1ME3B LINE L1 -207 5966 5847 6 1331 404 279 71 16 chrX 97847590 97847772 -68802524 - L1ME3A LINE L1 -19 6154 5963 6 1331 297 51 0 0 chrX 97847988 97848027 -68802269 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1331 812 273 93 8 chrX 97848030 97848288 -68802008 - B4 SINE B4 -12 280 1 6 1331 888 211 11 21 chrX 97848311 97848500 -68801796 - B2_Mm2 SINE B2 -7 188 2 6 1331 250 269 38 9 chrX 97848503 97848608 -68801688 - L1ME3A LINE L1 -752 5488 5381 6 1331 287 170 157 0 chrX 97848609 97848684 -68801612 - B1F SINE Alu -56 93 7 6 1331 291 255 125 40 chrX 97848875 97849075 -68801221 - L1ME3A LINE L1 -1048 5098 4882 6 1331 303 271 50 13 chrX 97849174 97849282 -68801014 + PB1 SINE Alu 12 103 -24 6 1331 812 298 44 0 chrX 97849308 97849556 -68800740 + B4A SINE B4 5 263 -29 6 1331 21 82 0 0 chrX 97849583 97849632 -68800664 + AT_rich Low_complexity Low_complexity 1 49 0 6 1331 920 212 40 5 chrX 97849635 97849834 -68800462 + B3 SINE B2 2 207 -9 6 1331 826 135 2 32 chrX 97849925 97850067 -68800229 - B2_Mm2 SINE B2 -52 141 2 6 1331 324 222 0 11 chrX 97850298 97850389 -68799907 - L1MA4 LINE L1 -398 5902 5813 6 1331 245 308 176 0 chrX 97850392 97850483 -68799813 + B1F SINE Alu 38 144 -5 6 1331 492 233 225 25 chrX 97850553 97850918 -68799378 - L1MA4 LINE L1 -1454 4689 4252 6 1331 1208 92 16 0 chrX 97850915 97851099 -68799197 - Lx LINE L1 -641 6013 5827 6 1331 775 168 19 0 chrX 97851099 97851260 -68799036 + CT-rich Low_complexity Low_complexity 4 167 0 6 1331 1151 63 0 0 chrX 97851260 97851402 -68798894 - B1_Mus2 SINE Alu -5 142 1 6 1331 3413 143 17 3 chrX 97852770 97853358 -68796938 - Lx4B LINE L1 -809 6249 5654 6 1331 828 230 30 30 chrX 97853375 97853572 -68796724 - B3A SINE B2 -1 197 1 6 1331 419 331 71 49 chrX 97853611 97853795 -68796501 - B4A SINE B4 -6 286 99 6 1331 185 357 117 32 chrX 97853819 97854007 -68796289 - L3 LINE CR1 -2206 2283 2080 6 1331 195 306 165 35 chrX 97854029 97854144 -68796152 - MIRc SINE MIR -49 219 90 6 1331 835 281 19 42 chrX 97854231 97854443 -68795853 - ID_B1 SINE B4 -17 207 1 6 1331 438 307 66 38 chrX 97854605 97854818 -68795478 - MER20 DNA MER1_type 0 219 1 6 1331 818 294 35 0 chrX 97855103 97855304 -68794992 - B3 SINE B2 0 216 9 6 1331 310 174 119 17 chrX 97855329 97855453 -68794843 - B1F2 SINE Alu 0 148 21 6 1331 6690 61 14 2 chrX 97855731 97856635 -68793661 - L1_Mur1 LINE L1 -86 5800 4886 6 1331 6959 25 2 2 chrX 97857072 97857919 -68792377 - MT-int LTR MaLR -73 1025 179 6 1331 332 329 67 20 chrX 97858088 97858237 -68792059 - MLT1A1 LTR MaLR -6 402 247 7 1331 543 240 12 85 chrX 97858275 97858348 -68791948 - BC1_Mm scRNA scRNA 0 152 84 7 1331 1298 108 32 0 chrX 97858348 97858534 -68791762 - B2_Mm2 SINE B2 -2 193 2 7 1331 198 0 0 0 chrX 97858543 97858565 -68791731 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 7 1331 543 240 12 85 chrX 97858565 97858645 -68791651 - BC1_Mm scRNA scRNA -72 80 1 7 1331 440 117 0 13 chrX 97858683 97858761 -68791535 + (TTCC)n Simple_repeat Simple_repeat 1 77 0 7 1331 449 244 122 0 chrX 97858761 97858884 -68791412 - B1_Mm SINE Alu -1 146 9 7 1331 262 233 33 0 chrX 97858881 97858941 -68791355 - MLT1A1 LTR MaLR -346 62 1 7 1331 269 261 222 6 chrX 97858942 97859110 -68791186 - MIRb SINE MIR -18 250 34 7 1331 344 256 13 0 chrX 97859230 97859308 -68790988 + PB1D7 SINE Alu 37 115 -5 7 1331 1358 66 16 0 chrX 97859340 97859522 -68790774 - B2_Mm1a SINE B2 -7 186 2 7 1331 278 323 113 0 chrX 97859562 97859686 -68790610 + MIRc SINE MIR 6 143 -125 7 1331 234 0 0 0 chrX 97862674 97862700 -68787596 + (CTTG)n Simple_repeat Simple_repeat 1 26 0 7 1331 318 264 33 91 chrX 97862705 97862826 -68787470 - PB1D10 SINE Alu -1 116 3 7 1331 214 375 0 0 chrX 97862767 97862839 -68787457 - B4A SINE B4 -146 146 75 7 1331 693 203 53 0 chrX 97862877 97863010 -68787286 - B1_Mur1 SINE Alu -8 141 2 7 1331 257 301 107 48 chrX 97863237 97863441 -68786855 - L2a LINE L2 -1 3425 3183 7 1331 535 290 106 11 chrX 97863553 97863741 -68786555 + MIR SINE MIR 18 223 -39 7 1331 181 297 26 39 chrX 97863718 97863795 -68786501 - L2a LINE L2 -366 3009 2934 7 1331 236 244 58 103 chrX 97865084 97865171 -68785125 - B1F SINE Alu -14 135 53 7 1331 1090 259 131 29 chrX 97865503 97866024 -68784272 - L1MC4a LINE L1 -760 7122 6549 7 1331 389 296 0 47 chrX 97866524 97866631 -68783665 - L1MC4a LINE L1 -1359 6523 6424 7 1331 2379 169 29 0 chrX 97866631 97867040 -68783256 - MTC LTR MaLR 0 421 1 7 1331 389 314 1 47 chrX 97867040 97867124 -68783172 - L1MC4a LINE L1 -1459 6423 6306 7 1331 890 254 86 31 chrX 97867247 97867597 -68782699 + L1M3 LINE L1 5412 5780 -391 7 1331 397 198 12 0 chrX 97867738 97867819 -68782477 + PB1D9 SINE Alu 34 115 -5 7 1331 535 297 178 33 chrX 97867834 97868346 -68781950 + L1M3b LINE L1 174 759 -5522 7 1331 1139 256 16 6 chrX 97868620 97868939 -68781357 - L1M3 LINE L1 -371 5812 5491 7 1331 406 164 27 0 chrX 97869100 97869173 -68781123 + RMER6B LTR ERVK 387 461 0 7 1331 1209 35 14 0 chrX 97869214 97869359 -68780937 + B1_Mus1 SINE Alu 2 148 0 7 1331 302 227 82 5 chrX 97869434 97869543 -68780753 + B3A SINE B2 94 211 -5 7 1331 180 0 0 0 chrX 97869605 97869625 -68780671 + (TA)n Simple_repeat Simple_repeat 2 21 0 7 1331 22 80 0 0 chrX 97869648 97869698 -68780598 + AT_rich Low_complexity Low_complexity 1 50 0 7 1331 180 111 0 0 chrX 97870141 97870168 -68780128 + (CA)n Simple_repeat Simple_repeat 1 27 0 7 1331 633 253 6 74 chrX 97870195 97870370 -68779926 + RSINE1 SINE B4 2 164 -1 7 1331 23 0 0 0 chrX 97870470 97870493 -68779803 + AT_rich Low_complexity Low_complexity 1 23 0 7 1331 504 312 16 78 chrX 97870956 97871199 -68779097 + MIR SINE MIR 7 234 -28 7 1331 450 0 0 0 chrX 97871730 97871780 -68778516 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 1331 686 226 116 84 chrX 97871817 97871899 -68778397 - B4A SINE B4 -8 284 209 7 1331 788 224 10 53 chrX 97871899 97872106 -68778190 - B3A SINE B2 0 198 1 7 1331 686 226 116 84 chrX 97872106 97872298 -68777998 - B4A SINE B4 -84 208 1 7 1331 409 304 20 13 chrX 97873065 97873144 -68777152 + ID SINE ID 1 80 -144 7 1331 332 298 24 73 chrX 97873144 97873267 -68777029 + PB1D9 SINE Alu 1 117 -3 7 1331 298 91 36 0 chrX 97874241 97874296 -68776000 + (TA)n Simple_repeat Simple_repeat 1 57 0 7 1331 1315 139 4 90 chrX 97874347 97874592 -68775704 - URR1B DNA MER1_type 0 225 2 7 1331 1017 207 58 15 chrX 97874604 97874810 -68775486 + B3 SINE B2 2 216 0 7 1331 378 0 0 0 chrX 97875730 97875772 -68774524 + (TC)n Simple_repeat Simple_repeat 1 42 0 7 1331 268 258 61 0 chrX 97875774 97875840 -68774456 + PB1D10 SINE Alu 48 117 0 7 1331 474 204 194 0 chrX 97875940 97876043 -68774253 - B3 SINE B2 -87 129 7 7 1331 225 343 29 0 chrX 97876397 97876467 -68773829 + MIRb SINE MIR 28 99 -169 7 1331 16979 68 229 2 chrX 97876706 97880365 -68769931 - L1Md_F2 LINE L1 -13 6569 1988 7 1331 1096 204 12 20 chrX 97880557 97880802 -68769494 - Lx9 LINE L1 -425 7219 6977 7 1331 1645 162 75 6 chrX 97880806 97881141 -68769155 + Lx9 LINE L1 7286 7643 -1 7 1331 745 165 0 0 chrX 97881159 97881274 -68769022 + B1_Mur1 SINE Alu 25 139 -10 7 1331 369 271 0 23 chrX 97881360 97881447 -68768849 + B3 SINE B2 104 188 -28 7 1331 23 0 0 0 chrX 97882320 97882343 -68767953 + AT_rich Low_complexity Low_complexity 1 23 0 7 1331 304 275 122 0 chrX 97882928 97883054 -68767242 + B1F SINE Alu 2 141 -8 7 1331 1301 203 56 80 chrX 97885410 97885829 -68764467 - MT2A LTR ERVL -61 540 1 7 1331 311 327 94 25 chrX 97886555 97886715 -68763581 - HAL1 LINE L1 -1558 949 779 7 1331 206 32 0 31 chrX 97887245 97887277 -68763019 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1331 524 163 259 0 chrX 97887277 97887412 -68762884 - Lx4A LINE L1 -5 7053 6884 7 1331 435 19 0 0 chrX 97887828 97887880 -68762416 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 1331 723 247 38 38 chrX 97888457 97888642 -68761654 + ID_B1 SINE B4 3 187 -37 7 1331 230 250 124 10 chrX 97888559 97888656 -68761640 + B1_Mus1 SINE Alu 28 135 -13 7 1331 225 83 0 0 chrX 97888656 97888692 -68761604 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 7 1331 485 261 8 0 chrX 97888808 97888927 -68761369 - PB1 SINE Alu -7 120 1 7 1331 1354 296 101 10 chrX 97888953 97889458 -68760838 - MER68 LTR ERVL -4 559 9 7 1331 231 311 156 0 chrX 97889641 97889731 -68760565 + PB1D10 SINE Alu 1 104 -13 7 1331 1262 44 0 0 chrX 97889751 97889911 -68760385 + B2_Mm1a SINE B2 1 160 -33 7 1331 351 0 0 0 chrX 97889911 97889950 -68760346 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 7 1331 200 214 0 23 chrX 97889959 97890002 -68760294 + GA-rich Low_complexity Low_complexity 3 44 0 7 1331 283 204 0 0 chrX 97890054 97890108 -68760188 + B1_Mur1 SINE Alu 94 147 -2 7 1331 364 240 248 0 chrX 97890518 97890639 -68759657 - B3A SINE B2 -47 151 1 7 1331 466 184 0 0 chrX 97891946 97892022 -68758274 + B1_Mur2 SINE Alu 20 95 -54 7 1331 448 241 59 114 chrX 97892031 97892251 -68758045 - Lx4B LINE L1 -1 7057 6850 7 1331 429 284 89 7 chrX 97892329 97892464 -68757832 + B3A SINE B2 47 192 -6 7 1331 211 276 0 33 chrX 97892957 97893017 -68757279 - L2a LINE L2 -12 3414 3357 7 1331 465 237 52 0 chrX 97893734 97893831 -68756465 - RSINE1 SINE B4 -61 104 3 7 1331 280 281 223 0 chrX 97894084 97894205 -68756091 + L1M4 LINE L1 5420 5567 -607 7 1331 396 291 127 8 chrX 97894228 97894346 -68755950 - RSINE1 SINE B4 -30 135 4 7 1331 777 263 193 26 chrX 97894505 97894837 -68755459 + L1M4 LINE L1 3908 4323 -1817 7 1331 725 269 19 43 chrX 97894837 97895047 -68755249 + B3 SINE B2 2 206 -10 7 1331 777 252 132 28 chrX 97895047 97895297 -68754999 + L1M4 LINE L1 4324 4608 -1532 7 1331 295 121 17 33 chrX 97895341 97895401 -68754895 + L1M4 LINE L1 4599 4657 -1489 7 1331 225 279 98 0 chrX 97895505 97895566 -68754730 - ID4_ SINE ID -15 68 2 7 1331 36 77 0 0 chrX 97895575 97895653 -68754643 + AT_rich Low_complexity Low_complexity 1 78 0 7 1331 383 346 15 15 chrX 97896030 97896165 -68754131 + B4 SINE B4 150 284 -8 7 1331 233 264 121 0 chrX 97896370 97896461 -68753835 + RSINE1 SINE B4 58 159 -6 7 1331 432 271 181 25 chrX 97896490 97896766 -68753530 + L1MB7 LINE L1 5013 5331 -815 7 1331 1257 282 130 23 chrX 97896781 97897488 -68752808 + L1MB7 LINE L1 5386 6168 -16 7 1331 264 270 31 16 chrX 97898128 97898192 -68752104 - ID2 SINE ID -13 70 6 7 1331 358 217 98 24 chrX 97898552 97898675 -68751621 - Lx7 LINE L1 -283 7413 7282 7 1331 528 290 23 0 chrX 97899636 97899767 -68750529 - ID_B1 SINE B4 -3 221 88 7 1331 1151 173 44 4 chrX 97900393 97900620 -68749676 + Lx5 LINE L1 6815 7050 0 7 1331 24 0 0 0 chrX 97900628 97900652 -68749644 + AT_rich Low_complexity Low_complexity 1 24 0 7 1331 614 229 108 38 chrX 97900770 97901010 -68749286 + MTEb LTR MaLR 123 379 0 7 1331 297 0 0 0 chrX 97901119 97901152 -68749144 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1331 234 0 0 0 chrX 97901152 97901177 -68749119 + (GA)n Simple_repeat Simple_repeat 2 27 0 7 1331 950 153 0 13 chrX 97901246 97901398 -68748898 + B1_Mur4 SINE Alu 1 150 0 7 1331 499 246 139 52 chrX 97901405 97901692 -68748604 - L1ME1 LINE L1 -217 5962 5651 7 1331 519 143 0 52 chrX 97901717 97901813 -68748483 - B1_Mur2 SINE Alu 0 149 59 7 1331 360 0 0 0 chrX 97901819 97901859 -68748437 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1331 495 233 26 8 chrX 97902066 97902183 -68748113 - ID_B1 SINE B4 -1 223 105 7 1331 239 132 0 0 chrX 97902180 97902218 -68748078 + U5 snRNA snRNA 1 38 -78 7 1331 386 313 99 25 chrX 97902406 97902673 -68747623 - L1ME1 LINE L1 -1273 4873 4575 7 1331 882 194 99 5 chrX 97902712 97902904 -68747392 + B3 SINE B2 1 210 -6 7 1331 22 35 0 0 chrX 97902907 97902936 -68747360 + AT_rich Low_complexity Low_complexity 1 29 0 7 1331 335 221 53 83 chrX 97903059 97903192 -68747104 - L1MD3 LINE L1 -2107 5888 5760 7 1331 383 233 0 130 chrX 97903222 97903360 -68746936 - PB1D7 SINE Alu 0 120 1 7 1331 1271 296 107 7 chrX 97903373 97903812 -68746484 - MLT2B3 LTR ERVL 0 554 72 7 1331 393 227 116 7 chrX 97904253 97904408 -68745888 - Tigger5 DNA MER2_type -99 2307 2136 7 1331 420 241 26 66 chrX 97904403 97904554 -68745742 - Tigger5 DNA MER2_type -2089 317 173 7 1331 606 232 2 2 chrX 97904561 97904693 -68745603 + B1F2 SINE Alu 3 134 -15 8 1331 440 264 0 60 chrX 97904576 97904709 -68745587 + ID_B1 SINE B4 99 223 -1 8 1331 1200 61 0 0 chrX 97904748 97904895 -68745401 - B1_Mm SINE Alu 0 147 1 8 1331 771 202 148 0 chrX 97904986 97905169 -68745127 - B3 SINE B2 -6 210 1 8 1331 238 301 66 28 chrX 97905178 97905284 -68745012 - PB1D10 SINE Alu -7 110 1 8 1331 1651 58 9 5 chrX 97905336 97905560 -68744736 - L1_Mus3 LINE L1 -5 6633 6409 8 1331 250 231 41 107 chrX 97905560 97905634 -68744662 - L1ME1 LINE L1 -3818 2328 2255 7 1331 1194 61 0 0 chrX 97905634 97905782 -68744514 - B1_Mus1 SINE Alu 0 148 1 8 1331 250 211 36 121 chrX 97905782 97905847 -68744449 - L1ME1 LINE L1 -3886 2260 2201 7 1331 482 265 201 17 chrX 97906101 97906400 -68743896 - Lx8 LINE L1 -9 7464 7111 8 1331 25 0 0 0 chrX 97906575 97906600 -68743696 + AT_rich Low_complexity Low_complexity 1 25 0 8 1331 791 228 25 40 chrX 97906630 97906831 -68743465 - B3A SINE B2 0 198 1 8 1331 970 294 73 27 chrX 97907765 97908177 -68742119 + L1_Mur3 LINE L1 4822 5252 -628 8 1331 1009 123 14 0 chrX 97908181 97908327 -68741969 + B1_Mus1 SINE Alu 1 148 0 8 1331 3208 142 12 0 chrX 97908345 97908838 -68741458 - RLTR19 LTR ERVK 0 499 1 8 1331 21 0 0 0 chrX 97909002 97909023 -68741273 + AT_rich Low_complexity Low_complexity 1 21 0 8 1331 420 20 0 0 chrX 97909716 97909765 -68740531 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 8 1331 828 148 0 26 chrX 97909790 97909943 -68740353 - B1_Mur3 SINE Alu 0 149 1 8 1331 450 216 0 17 chrX 97910234 97910348 -68739948 + B1F2 SINE Alu 2 109 -40 8 1331 819 177 185 16 chrX 97910557 97910741 -68739555 + B3 SINE B2 1 215 -1 8 1332 329 264 26 70 chrX 97911179 97911293 -68739003 + PB1D10 SINE Alu 8 116 -1 8 1332 495 273 74 37 chrX 97912001 97912191 -68738105 + B3A SINE B2 2 198 0 8 1332 781 224 0 20 chrX 97912921 97913071 -68737225 + B1F2 SINE Alu 2 148 -1 8 1332 216 0 0 0 chrX 97913802 97913826 -68736470 + (TTTTTA)n Simple_repeat Simple_repeat 2 25 0 8 1332 264 289 39 72 chrX 97914451 97914471 -68735825 - B1_Mur3 SINE Alu -1 148 1 8 1332 432 281 15 38 chrX 97914471 97914604 -68735692 - ID_B1 SINE B4 -13 211 82 8 1332 505 129 0 21 chrX 97915771 97915866 -68734430 + (TA)n Simple_repeat Simple_repeat 2 94 0 8 1332 838 221 52 6 chrX 97916507 97916680 -68733616 - B3A SINE B2 -16 182 2 8 1332 255 312 53 11 chrX 97917323 97917417 -68732879 + L1ME4a LINE L1 5516 5613 -511 8 1332 3492 23 5 0 chrX 97917633 97918027 -68732269 - MTA_Mm LTR MaLR 0 396 1 8 1332 277 271 27 26 chrX 97918150 97918262 -68732034 + PB1D10 SINE Alu 8 114 -3 8 1332 336 224 98 63 chrX 97918451 97918594 -68731702 + L1ME4a LINE L1 5684 5831 -293 8 1332 183 42 0 0 chrX 97918833 97918857 -68731439 + (TTGG)n Simple_repeat Simple_repeat 4 27 0 8 1332 984 106 0 7 chrX 97918878 97919021 -68731275 - B1_Mus1 SINE Alu -5 143 2 8 1332 427 170 131 9 chrX 97919086 97919193 -68731103 - PB1D9 SINE Alu 0 120 1 8 1332 367 326 36 40 chrX 97919193 97919417 -68730879 - L3 LINE CR1 -678 3811 3589 8 1332 204 40 0 0 chrX 97919430 97919455 -68730841 + (TG)n Simple_repeat Simple_repeat 1 25 0 8 1332 378 0 0 0 chrX 97919455 97919496 -68730800 + (GA)n Simple_repeat Simple_repeat 1 42 0 8 1332 255 272 35 58 chrX 97920785 97920871 -68729425 - MIR3 SINE MIR -48 160 77 8 1332 185 297 108 0 chrX 97920914 97920988 -68729308 + MIR SINE MIR 53 134 -74 8 1332 343 302 8 65 chrX 97921083 97921207 -68729089 - PB1D10 SINE Alu 0 117 1 8 1332 331 241 0 67 chrX 97922711 97922800 -68727496 - ID4_ SINE ID 0 83 1 8 1332 868 165 21 42 chrX 97922920 97923081 -68727215 + B2_Mm2 SINE B2 3 156 -39 8 1332 3349 38 5 0 chrX 97923081 97923475 -68726821 - MTA_Mm LTR MaLR 0 396 1 8 1332 868 165 21 42 chrX 97923475 97923503 -68726793 + B2_Mm2 SINE B2 157 187 -8 8 1332 1062 45 0 58 chrX 97926022 97926213 -68724083 + (GA)n Simple_repeat Simple_repeat 1 180 0 8 1332 452 304 37 26 chrX 97930620 97930809 -68719487 + MIR SINE MIR 41 231 -31 8 1332 551 214 0 71 chrX 97931378 97931504 -68718792 + B1_Mur1 SINE Alu 1 117 -32 8 1332 309 26 0 0 chrX 97932255 97932293 -68718003 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 8 1332 284 120 20 0 chrX 97933403 97933453 -68716843 + (TC)n Simple_repeat Simple_repeat 2 52 0 8 1332 186 43 0 0 chrX 97935070 97935093 -68715203 + (CA)n Simple_repeat Simple_repeat 1 23 0 8 1332 414 0 0 0 chrX 97935126 97935172 -68715124 + (TC)n Simple_repeat Simple_repeat 1 46 0 8 1332 387 0 0 0 chrX 97935172 97935214 -68715082 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 1332 657 127 11 65 chrX 97935589 97935775 -68714521 + CT-rich Low_complexity Low_complexity 5 180 0 8 1332 510 188 11 34 chrX 97935780 97936050 -68714246 + C-rich Low_complexity Low_complexity 1 263 0 8 1332 692 308 10 0 chrX 97937704 97937899 -68712397 + B3A SINE B2 1 197 -1 8 1332 423 284 34 8 chrX 97937922 97938039 -68712257 + RSINE1 SINE B4 5 124 -41 8 1332 447 19 0 0 chrX 97938039 97938091 -68712205 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 1332 697 303 0 49 chrX 97938091 97938296 -68712000 + B3 SINE B2 1 195 0 8 1332 2051 153 14 6 chrX 97938304 97938653 -68711643 - ORR1C1 LTR MaLR 0 378 27 8 1332 746 130 43 7 chrX 97938643 97938782 -68711514 + ORR1B1-int LTR MaLR 1167 1310 -199 8 1332 3927 217 58 16 chrX 97938784 97939755 -68710541 - ORR1C1-int LTR MaLR -359 1011 1 8 1332 1678 165 110 6 chrX 97939757 97940092 -68710204 - ORR1C1 LTR MaLR -8 370 1 8 1332 288 0 0 0 chrX 97940304 97940336 -68709960 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 1332 567 333 14 42 chrX 97940459 97940747 -68709549 + L2 LINE L2 2590 2869 -550 8 1332 1011 76 14 0 chrX 97940813 97940957 -68709339 + B1_Mus1 SINE Alu 3 148 0 8 1332 29 0 0 0 chrX 97941025 97941054 -68709242 + AT_rich Low_complexity Low_complexity 1 29 0 8 1332 298 179 0 0 chrX 97941074 97941130 -68709166 + L1MDa LINE L1 1818 1873 -4760 8 1332 320 257 0 26 chrX 97941161 97941237 -68709059 + ID_B1 SINE B4 143 216 -8 8 1332 862 126 66 7 chrX 97941427 97941563 -68708733 + B1_Mur4 SINE Alu 1 144 -6 8 1332 618 82 0 0 chrX 97941563 97941648 -68708648 + (GA)n Simple_repeat Simple_repeat 2 86 0 8 1332 1729 219 23 18 chrX 97941664 97942050 -68708246 + L1MDa LINE L1 1874 2261 -4372 8 1332 517 269 244 20 chrX 97942087 97942332 -68707964 + L1MD2 LINE L1 6044 6343 -16 8 1332 1074 200 0 0 chrX 97942344 97942534 -68707762 + B3 SINE B2 1 190 -26 8 1332 252 0 0 0 chrX 97942684 97942712 -68707584 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 8 1332 294 29 0 0 chrX 97942715 97942750 -68707546 + (TG)n Simple_repeat Simple_repeat 1 35 0 8 1332 682 250 0 0 chrX 97942766 97942910 -68707386 - B3A SINE B2 -53 145 2 8 1332 432 207 0 0 chrX 97943168 97943295 -68707001 + B3 SINE B2 3 211 -5 8 1332 395 291 113 80 chrX 97943332 97943571 -68706725 - B4A SINE B4 -14 278 32 8 1332 1047 214 45 0 chrX 97943973 97944216 -68706080 - RCHARR1 DNA MER1_type 0 974 721 8 1332 247 262 88 88 chrX 97944259 97944300 -68705996 - RCHARR1 DNA MER1_type -385 589 536 8 1332 758 119 103 0 chrX 97944300 97944426 -68705870 - B1_Mur2 SINE Alu -10 139 1 8 1332 247 262 88 88 chrX 97944426 97944498 -68705798 - RCHARR1 DNA MER1_type -439 535 467 8 1332 926 245 5 19 chrX 97944498 97944706 -68705590 + ID_B1 SINE B4 1 205 -19 8 1332 247 262 88 88 chrX 97944706 97944750 -68705546 - RCHARR1 DNA MER1_type -508 466 432 8 1332 1004 286 4 16 chrX 97944759 97945011 -68705285 + 7SK RNA RNA 1 249 -82 8 1332 1244 275 84 16 chrX 97944996 97945377 -68704919 - RCHARR1 DNA MER1_type -522 452 46 8 1332 510 57 0 0 chrX 97946053 97946123 -68704173 + (TG)n Simple_repeat Simple_repeat 2 71 0 8 1332 629 191 108 31 chrX 97946126 97946256 -68704040 - B3A SINE B2 -54 144 5 8 1332 3044 257 76 32 chrX 97946263 97947200 -68703096 - ERVL-int LTR ERVL -322 5435 4458 8 1332 3077 270 72 13 chrX 97947225 97948096 -68702200 - Lx8 LINE L1 -287 7186 6264 8 1332 4982 96 13 10 chrX 97948098 97948810 -68701486 - Lx LINE L1 0 6654 5941 8 1332 1792 214 78 28 chrX 97948811 97949234 -68701062 - ERVL-int LTR ERVL -2291 3470 3027 8 1332 228 186 0 132 chrX 97949264 97949332 -68700964 + MT2B LTR ERVL 193 251 -350 8 1332 380 163 0 36 chrX 97949272 97949359 -68700937 + B1_Mur4 SINE Alu 40 119 -1 8 1332 993 239 15 0 chrX 97949383 97949580 -68700716 - B3 SINE B2 -14 202 3 8 1332 477 0 0 0 chrX 97949678 97949731 -68700565 + (TA)n Simple_repeat Simple_repeat 1 53 0 8 1332 800 170 46 119 chrX 97949750 97949944 -68700352 + ORR1C1 LTR MaLR 1 180 -198 8 1332 235 164 33 0 chrX 97949946 97950007 -68700289 + CT-rich Low_complexity Low_complexity 3 65 0 8 1332 429 70 0 0 chrX 97950015 97950072 -68700224 + (TATG)n Simple_repeat Simple_repeat 2 58 0 8 1332 1051 191 29 34 chrX 97950072 97950269 -68700027 + ORR1C1 LTR MaLR 174 370 -8 8 1332 2347 170 35 5 chrX 97950271 97950696 -68699600 + ORR1C1-int LTR MaLR 1 438 -1071 8 1332 984 174 17 11 chrX 97950676 97950850 -68699446 + MTC LTR MaLR 223 397 -24 8 1332 1030 292 20 13 chrX 97950880 97951178 -68699118 + Lx8 LINE L1 6850 7149 -324 8 1332 2894 299 62 14 chrX 97951188 97951484 -68698812 - ERVL-int LTR ERVL -3583 2131 1830 8 1332 909 175 0 0 chrX 97951484 97951627 -68698669 + B1_Mur4 SINE Alu 2 144 -6 8 1332 396 0 0 0 chrX 97951628 97951672 -68698624 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 1332 2894 299 62 14 chrX 97951672 97952326 -68697970 - ERVL-int LTR ERVL -3885 1829 1133 8 1332 388 283 59 16 chrX 97952356 97952494 -68697802 - B3A SINE B2 -15 201 60 8 1332 1612 278 8 3 chrX 97952494 97952873 -68697423 - ERVL-int LTR ERVL -4618 1096 716 8 1332 451 280 68 0 chrX 97952973 97953091 -68697205 + B3A SINE B2 1 126 -72 8 1332 699 75 0 0 chrX 97953118 97953212 -68697084 + (CA)n Simple_repeat Simple_repeat 2 95 0 8 1332 748 134 299 18 chrX 97953246 97953413 -68696883 + B3 SINE B2 2 215 -1 8 1332 1047 262 15 4 chrX 97953442 97953702 -68696594 - ERVL-int LTR ERVL -5048 713 451 8 1332 1551 253 33 38 chrX 97953711 97954105 -68696191 - Lx5 LINE L1 -46 7004 6613 8 1332 626 305 19 24 chrX 97954126 97954331 -68695965 - ERVL-int LTR ERVL -5363 394 191 8 1332 38611 29 0 1 chrX 97954331 97960794 -68689502 - L1Md_T LINE L1 0 6585 85 8 1332 252 242 39 87 chrX 97960794 97960898 -68689398 - ERVL-int LTR ERVL -5531 183 85 8 1332 844 309 90 88 chrX 97960946 97961260 -68689036 - MT2A LTR ERVL 0 533 201 8 1332 767 247 88 0 chrX 97961260 97961454 -68688842 + B3 SINE B2 1 211 -5 8 1332 844 309 90 88 chrX 97961454 97961671 -68688625 - MT2A LTR ERVL -333 200 2 8 1332 236 299 15 15 chrX 97961815 97961883 -68688413 + L2b LINE L2 3303 3370 -5 9 1332 205 336 182 22 chrX 97961928 97962065 -68688231 + MIR SINE MIR 13 171 -91 9 1332 224 286 63 0 chrX 97962140 97962203 -68688093 + PB1D7 SINE Alu 1 67 -53 9 1332 180 0 0 0 chrX 97963343 97963363 -68686933 + (CGG)n Simple_repeat Simple_repeat 1 20 0 9 1332 324 0 0 0 chrX 97964462 97964498 -68685798 + (TG)n Simple_repeat Simple_repeat 2 37 0 9 1332 321 270 121 32 chrX 97966373 97966530 -68683766 + MIR3 SINE MIR 38 208 0 9 1332 504 286 104 30 chrX 97968841 97968939 -68681357 + MIRc SINE MIR 52 157 -111 9 1332 432 0 0 0 chrX 97968939 97968987 -68681309 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 1332 504 286 104 30 chrX 97968987 97969090 -68681206 + MIRc SINE MIR 158 268 0 9 1332 459 0 0 0 chrX 97969351 97969402 -68680894 + (TC)n Simple_repeat Simple_repeat 1 51 0 9 1332 618 14 0 0 chrX 97970483 97970554 -68679742 + (TA)n Simple_repeat Simple_repeat 2 72 0 9 1332 268 235 0 56 chrX 97972537 97972609 -68677687 + C-rich Low_complexity Low_complexity 2 69 0 9 1332 324 0 0 0 chrX 97973781 97973817 -68676479 + (TG)n Simple_repeat Simple_repeat 2 37 0 9 1332 248 244 118 31 chrX 97974843 97974970 -68675326 - L1MB8 LINE L1 -2 6176 6039 9 1332 21 0 0 0 chrX 97975040 97975061 -68675235 + GC_rich Low_complexity Low_complexity 1 21 0 9 1332 286 164 55 23 chrX 97975878 97975994 -68674302 + L1M4 LINE L1 5725 5847 -337 9 1332 315 297 8 59 chrX 97975999 97976117 -68674179 + MT2B LTR ERVL 147 258 -343 9 1332 691 121 61 53 chrX 97976032 97976163 -68674133 + B1_Mur2 SINE Alu 17 148 -1 9 1332 630 197 38 0 chrX 97976435 97976567 -68673729 - B1_Mur4 SINE Alu -13 137 1 9 1332 583 241 54 41 chrX 97976587 97976734 -68673562 - B1_Mur1 SINE Alu 0 149 1 9 1332 237 189 86 181 chrX 97976633 97976749 -68673547 - MT2B LTR ERVL -344 257 153 9 1332 301 269 13 0 chrX 97976951 97977029 -68673267 - ID4 SINE ID -3 80 2 9 1332 469 28 0 65 chrX 97977040 97977117 -68673179 + (TTTA)n Simple_repeat Simple_repeat 2 73 0 9 1332 1103 65 14 0 chrX 97977117 97977256 -68673040 - B1_Mus1 SINE Alu -7 141 1 9 1332 706 256 16 31 chrX 97977315 97977538 -68672758 - L1MB8 LINE L1 -154 6020 5801 9 1332 225 0 0 0 chrX 97977541 97977566 -68672730 + (TG)n Simple_repeat Simple_repeat 2 26 0 9 1332 620 180 115 2 chrX 97977719 97977873 -68672423 - L1MB8 LINE L1 -664 5516 5351 9 1332 1264 253 148 34 chrX 97978101 97978662 -68671634 - L1MB8 LINE L1 -14 6164 5540 9 1332 306 73 0 0 chrX 97979170 97979211 -68671085 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 1332 686 254 72 77 chrX 97980194 97980611 -68669685 - L1ME4a LINE L1 -125 5999 5585 9 1332 339 25 0 0 chrX 97980772 97980812 -68669484 + (TCCCC)n Simple_repeat Simple_repeat 5 44 0 9 1332 3654 263 79 12 chrX 97980846 97981861 -68668435 - Lx8 LINE L1 -146 7327 6245 9 1332 589 182 144 91 chrX 97981861 97982048 -68668248 - MTC LTR MaLR -2 417 221 9 1332 237 266 190 0 chrX 97982032 97982111 -68668185 + RMER12 LTR ERVK 743 836 -486 9 1332 342 0 0 0 chrX 97982112 97982150 -68668146 + (CA)n Simple_repeat Simple_repeat 2 39 0 9 1332 689 172 16 0 chrX 97982150 97982272 -68668024 - B1_Mus2 SINE Alu -19 128 5 9 1332 421 245 103 64 chrX 97982272 97982440 -68667856 - B3 SINE B2 -27 168 3 9 1332 1182 143 10 10 chrX 97982442 97982640 -68667656 - MTC LTR MaLR -212 209 12 9 1332 350 200 109 91 chrX 97982667 97982777 -68667519 + B1_Mus1 SINE Alu 34 145 -3 9 1332 280 236 124 26 chrX 97982790 97982903 -68667393 - Lx8 LINE L1 -1254 6219 6096 9 1332 264 239 236 11 chrX 97983151 97983240 -68667056 + PB1D10 SINE Alu 1 109 -8 9 1332 502 115 308 34 chrX 97983500 97983617 -68666679 - B2_Mm2 SINE B2 0 195 47 9 1332 271 274 54 14 chrX 97983811 97983885 -68666411 - ID4 SINE ID -5 78 2 9 1332 384 202 67 0 chrX 97983885 97983974 -68666322 - PB1D10 SINE Alu -1 116 22 9 1332 1233 54 0 0 chrX 97984482 97984629 -68665667 + B1_Mus2 SINE Alu 1 147 0 9 1332 324 0 0 0 chrX 97985108 97985144 -68665152 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 1332 312 298 147 36 chrX 97985213 97985464 -68664832 - CR1_Mam LINE CR1 -354 1850 1572 9 1332 605 227 35 0 chrX 97985773 97985914 -68664382 - B1F1 SINE Alu -3 146 1 9 1332 739 286 55 28 chrX 97985926 97986181 -68664115 - Charlie13a DNA Charlie -510 1004 743 9 1332 228 381 0 12 chrX 97986554 97986639 -68663657 + L2a LINE L2 3343 3426 0 9 1332 278 290 14 14 chrX 97987064 97987134 -68663162 + ID_B1 SINE B4 73 142 -82 9 1332 456 265 15 12 chrX 97987077 97987196 -68663100 + PB1 SINE Alu 6 120 0 9 1332 356 303 35 121 chrX 97987617 97987790 -68662506 - LTR85c LTR Gypsy? -649 174 17 9 1332 319 252 16 2 chrX 97987867 97987942 -68662354 - ID4 SINE ID -1 82 7 9 1332 310 207 150 0 chrX 97988077 97988178 -68662118 + PB1D10 SINE Alu 2 118 -29 9 1332 430 202 0 0 chrX 97988521 97988600 -68661696 + ID4 SINE ID 1 79 -4 9 1332 181 319 31 94 chrX 97988902 97989030 -68661266 - MER5A DNA MER1_type 0 189 70 9 1332 763 173 16 0 chrX 97989710 97989837 -68660459 - B3 SINE B2 -87 129 1 9 1332 421 296 0 0 chrX 97990405 97990520 -68659776 - PB1D10 SINE Alu -2 115 1 9 1332 289 211 203 38 chrX 97992521 97992654 -68657642 + B4 SINE B4 69 223 -69 9 1332 658 71 212 9 chrX 97992543 97992656 -68657640 + B1_Mus1 SINE Alu 13 148 0 9 1332 195 96 67 27 chrX 97992665 97992740 -68657556 + (CAAAC)n Simple_repeat Simple_repeat 2 79 0 9 1332 456 172 0 0 chrX 97993864 97993951 -68656345 + GA-rich Low_complexity Low_complexity 1 87 0 9 1332 333 297 25 55 chrX 97994119 97994237 -68656059 - PB1D10 SINE Alu -34 115 1 9 1332 672 253 16 49 chrX 97994516 97994699 -68655597 - B4 SINE B4 -115 177 1 9 1332 279 274 51 66 chrX 97995370 97995507 -68654789 + L3 LINE CR1 4261 4395 -94 9 1332 232 149 94 0 chrX 97995650 97995710 -68654586 - MIRc SINE MIR -76 192 120 9 1332 435 259 89 0 chrX 97996015 97996127 -68654169 - PB1 SINE Alu -3 124 3 9 1332 1097 61 0 24 chrX 97996379 97996546 -68653750 + (TCCCC)n Simple_repeat Simple_repeat 4 166 0 9 1332 191 88 0 29 chrX 97997025 97997060 -68653236 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 9 1332 465 279 7 79 chrX 97997969 97998121 -68652175 + RSINE1 SINE B4 3 143 -22 9 1332 324 0 0 0 chrX 97998255 97998291 -68652005 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 1332 349 321 119 0 chrX 97998692 97998826 -68651470 - Lx8 LINE L1 -119 7354 7205 9 1332 540 288 9 15 chrX 97998857 97999001 -68651295 - B3 SINE B2 -12 204 69 9 1332 216 238 0 0 chrX 97999936 97999999 -68650297 + (CATA)n Simple_repeat Simple_repeat 4 66 0 9 1332 275 306 61 10 chrX 98000053 98000077 -68650219 - PB1D10 SINE Alu -7 110 83 1 1332 1632 131 193 28 chrX 98000077 98000398 -68649898 - ORR1D1 LTR MaLR 0 374 1 2 1332 275 306 61 10 chrX 98000398 98000472 -68649824 - PB1D10 SINE Alu -35 82 7 1 1332 868 129 43 0 chrX 98001035 98001175 -68649121 + B1_Mur2 SINE Alu 1 146 -3 3 1332 666 271 0 53 chrX 98001194 98001381 -68648915 + B3A SINE B2 6 182 -16 4 1332 303 320 0 20 chrX 98002073 98002175 -68648121 + CT-rich Low_complexity Low_complexity 4 103 0 5 1332 543 205 26 0 chrX 98002185 98002321 -68647975 - B1F SINE Alu -1 148 9 6 1332 234 322 0 43 chrX 98005089 98005183 -68645113 + CT-rich Low_complexity Low_complexity 5 94 0 7 1332 189 0 0 0 chrX 98009079 98009100 -68641196 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 8 1332 1096 75 13 20 chrX 98009101 98009250 -68641046 - B1_Mus1 SINE Alu 0 148 1 9 1332 442 168 200 0 chrX 98009867 98009962 -68640334 - B3 SINE B2 -88 128 15 1 1332 252 134 62 0 chrX 98012137 98012234 -68638062 + (TA)n Simple_repeat Simple_repeat 2 104 0 1 1332 390 115 0 0 chrX 98014124 98014185 -68636111 + (CCTG)n Simple_repeat Simple_repeat 3 63 0 1 1332 282 29 0 0 chrX 98016042 98016077 -68634219 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1332 183 306 16 0 chrX 98016080 98016142 -68634154 - MIR SINE MIR -93 169 107 1 1332 225 163 0 0 chrX 98017018 98017067 -68633229 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 1332 237 193 105 35 chrX 98017453 98017539 -68632757 + MIR3 SINE MIR 109 200 -8 1 1332 1999 105 0 7 chrX 98017668 98017975 -68632321 - ORR1A2 LTR MaLR 0 327 23 1 1332 300 153 98 76 chrX 98018364 98018456 -68631840 - RMER15 LTR ERVL -135 440 347 1 1332 608 215 19 63 chrX 98018687 98018846 -68631450 - RMER15-int LTR ERVL -25 4974 4823 1 1332 1149 62 7 0 chrX 98018931 98019075 -68631221 - B1_Mus2 SINE Alu -1 146 2 1 1332 2084 257 57 30 chrX 98019097 98019694 -68630602 - RMER15-int LTR ERVL -229 4770 4158 1 1332 731 260 46 10 chrX 98019907 98020101 -68630195 - RMER15-int LTR ERVL -2504 2495 2295 1 1332 2453 244 114 17 chrX 98020660 98021726 -68628570 - RMER15-int LTR ERVL -3198 1801 632 1 1332 929 214 32 46 chrX 98021730 98021946 -68628350 + ID_B1 SINE B4 2 214 -10 2 1332 252 0 0 0 chrX 98022052 98022080 -68628216 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 2 1332 450 322 20 13 chrX 98022498 98022649 -68627647 - RMER15 LTR ERVL -11 564 413 1 1332 1190 240 87 29 chrX 98022898 98023242 -68627054 - ORR1D2 LTR MaLR -2 368 5 2 1332 2958 233 87 41 chrX 98023242 98024173 -68626123 - ORR1D2-int LTR MaLR -1 1369 396 2 1332 1643 218 86 10 chrX 98024191 98024576 -68625720 - MTD LTR MaLR -1 418 5 2 1332 1873 224 73 108 chrX 98024582 98025352 -68624944 - MTD-int LTR MaLR -10 1248 506 2 1332 323 125 13 34 chrX 98025389 98025456 -68624840 - B2_Mm2 SINE B2 -82 116 46 2 1332 1233 105 35 0 chrX 98025506 98025678 -68624618 - B2_Mm1t SINE B2 -14 179 2 2 1332 646 251 43 182 chrX 98025678 98025872 -68624424 - MTD-int LTR MaLR -741 517 343 2 1332 369 0 0 0 chrX 98025872 98025913 -68624383 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2 1332 1707 120 18 26 chrX 98025913 98026186 -68624110 - Lx4A LINE L1 -14 7044 6774 2 1332 646 251 43 182 chrX 98026186 98026266 -68624030 - MTD-int LTR MaLR -916 342 295 2 1332 342 0 0 0 chrX 98026266 98026304 -68623992 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2 1332 1099 89 6 0 chrX 98026304 98026461 -68623835 - B2_Mm1a SINE B2 -33 160 3 2 1332 646 251 43 182 chrX 98026461 98026626 -68623670 - MTD-int LTR MaLR -964 294 3 2 1332 2074 181 43 0 chrX 98026631 98027023 -68623273 - MTD LTR MaLR -8 411 3 2 1332 453 223 8 51 chrX 98027025 98027143 -68623153 - ORR1D-int LTR MaLR -989 381 269 3 1332 492 314 6 31 chrX 98027118 98027140 -68623156 - MTE2b LTR MaLR -219 160 4 3 1332 670 196 7 7 chrX 98027140 98027279 -68623017 - MT2A LTR ERVL -391 142 4 3 1332 183 80 0 0 chrX 98028308 98028333 -68621963 + (GGGTG)n Simple_repeat Simple_repeat 2 26 0 3 1332 329 272 11 21 chrX 98028363 98028457 -68621839 - PB1D10 SINE Alu -3 114 22 3 1332 338 243 40 0 chrX 98028542 98028616 -68621680 - ID4 SINE ID -2 81 5 3 1332 281 290 93 10 chrX 98029851 98029971 -68620325 - PB1 SINE Alu -2 125 1 3 1332 1130 214 101 69 chrX 98030015 98030361 -68619935 + ORR1E LTR MaLR 1 357 -2 3 1332 198 287 137 10 chrX 98030581 98030683 -68619613 - L2a LINE L2 0 3426 3312 3 1332 621 252 7 7 chrX 98030702 98030850 -68619446 + ID_B1 SINE B4 1 148 -76 3 1332 1382 284 129 66 chrX 98030903 98031976 -68618320 + L1MC4 LINE L1 6519 7659 -383 4 1332 263 204 111 22 chrX 98032222 98032312 -68617984 + MTEa LTR MaLR 278 375 -4 4 1332 1499 49 11 0 chrX 98032546 98032731 -68617565 - B2_Mm1t SINE B2 -6 187 1 4 1332 558 0 0 0 chrX 98033310 98033372 -68616924 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 1332 250 302 20 50 chrX 98033547 98033648 -68616648 + L3 LINE CR1 4208 4305 -184 4 1332 751 248 0 0 chrX 98034196 98034341 -68615955 - B3 SINE B2 -67 149 5 4 1332 284 273 11 11 chrX 98035946 98036035 -68614261 - PB1 SINE Alu 0 127 39 4 1332 329 280 27 0 chrX 98036206 98036281 -68614015 + ID4_ SINE ID 1 77 -6 4 1332 212 301 118 26 chrX 98036511 98036639 -68613657 + L2a LINE L2 3233 3426 0 4 1332 213 119 0 0 chrX 98036711 98036753 -68613543 + (T)n Simple_repeat Simple_repeat 1 42 0 4 1332 1226 48 0 7 chrX 98036753 98036901 -68613395 - B1_Mus2 SINE Alu 0 147 1 5 1332 301 195 217 17 chrX 98037141 98037261 -68613035 - L1M4 LINE L1 -435 5749 5606 5 1332 396 275 0 0 chrX 98037288 98037377 -68612919 - ID4_ SINE ID -58 94 6 5 1332 563 294 111 18 chrX 98037383 98037851 -68612445 - L1M4 LINE L1 -594 5580 5058 5 1332 271 197 38 101 chrX 98037891 98037905 -68612391 + PB1D7 SINE Alu 45 118 -2 5 1332 311 231 15 0 chrX 98037905 98037970 -68612326 + ID_B1 SINE B4 157 222 -2 5 1332 960 89 0 0 chrX 98037973 98038108 -68612188 + B2_Mm2 SINE B2 2 136 -59 5 1332 559 231 75 0 chrX 98038343 98038477 -68611819 - B1F SINE Alu -5 144 1 5 1332 3481 46 56 52 chrX 98038493 98038670 -68611626 - L1Md_F2 LINE L1 -12 6570 6395 5 1332 1130 88 0 0 chrX 98038670 98038817 -68611479 - B1_Mm SINE Alu 0 147 1 5 1332 3481 46 56 52 chrX 98038817 98039123 -68611173 - L1Md_F2 LINE L1 -188 6394 6085 5 1332 396 289 10 0 chrX 98039659 98039756 -68610540 + PB1D10 SINE Alu 7 104 -13 5 1332 1086 300 44 41 chrX 98039957 98040714 -68609582 + L1_Mur3 LINE L1 656 1431 -4449 6 1332 768 148 116 0 chrX 98040722 98040877 -68609419 + Lx4A LINE L1 6886 7058 0 6 1332 2334 182 101 8 chrX 98040863 98041390 -68608906 + L1_Mur3 LINE L1 1419 1994 -3886 6 1332 183 42 0 0 chrX 98041498 98041522 -68608774 + (TTG)n Simple_repeat Simple_repeat 1 24 0 6 1332 677 171 18 0 chrX 98041522 98041633 -68608663 - B1_Mur2 SINE Alu -13 136 24 6 166 3880 227 86 10 chrX 98041634 98043199 -68607097 + L1_Mur3 LINE L1 3578 5296 -581 6 1333 228 227 0 0 chrX 98043199 98043243 -68607053 + B2_Mm2 SINE B2 1 44 -151 6 1333 582 208 274 0 chrX 98043779 98043947 -68606349 - ID_B1 SINE B4 -8 216 3 6 1333 324 0 0 0 chrX 98044783 98044819 -68605477 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1333 455 333 0 23 chrX 98044841 98044970 -68605326 - RSINE1 SINE B4 -37 128 3 6 1333 261 139 0 0 chrX 98045520 98045563 -68604733 + (T)n Simple_repeat Simple_repeat 1 43 0 6 1333 306 0 0 0 chrX 98045817 98045851 -68604445 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 1333 369 0 0 0 chrX 98045852 98045893 -68604403 + (CA)n Simple_repeat Simple_repeat 1 41 0 7 1333 521 306 31 13 chrX 98046540 98046699 -68603597 + RSINE1 SINE B4 2 163 -2 7 1333 743 191 185 32 chrX 98047890 98048106 -68602190 - RMER15 LTR ERVL -305 270 22 7 1333 261 250 0 40 chrX 98048231 98048306 -68601990 - RMER15 LTR ERVL -503 72 1 7 1333 215 295 25 13 chrX 98048482 98048535 -68601761 + polypyrimidine Low_complexity Low_complexity 29 82 0 7 1333 556 310 6 6 chrX 98048535 98048694 -68601602 - RSINE1 SINE B4 -2 163 5 7 1333 215 295 25 13 chrX 98048694 98048719 -68601577 + polypyrimidine Low_complexity Low_complexity 4 28 0 7 1333 219 329 24 48 chrX 98048723 98048806 -68601490 - PB1D10 SINE Alu -36 81 1 7 1333 313 293 68 11 chrX 98049827 98050003 -68600293 + Charlie1a DNA MER1_type 455 640 -815 7 1333 1091 209 19 5 chrX 98050103 98050315 -68599981 - B3 SINE B2 0 216 2 7 1333 439 279 93 25 chrX 98050436 98050715 -68599581 + Charlie1a DNA MER1_type 726 1023 -432 7 1333 404 247 104 57 chrX 98050723 98050916 -68599380 + L1MA4 LINE L1 6040 6241 -59 8 1333 320 206 82 0 chrX 98050924 98051021 -68599275 + L1MB8 LINE L1 4466 4570 -1576 8 1333 765 114 98 0 chrX 98051036 98051159 -68599137 + B1_Mus1 SINE Alu 6 140 -8 8 1333 1053 290 16 3 chrX 98051178 98051544 -68598752 + L1MB8 LINE L1 4632 5002 -1144 8 1333 249 163 0 0 chrX 98051867 98051916 -68598380 + (TAA)n Simple_repeat Simple_repeat 2 50 0 8 1333 1833 250 88 18 chrX 98051937 98052559 -68597737 + L1MB8 LINE L1 5481 6146 -32 8 1333 577 326 11 27 chrX 98052597 98052780 -68597516 - B3A SINE B2 -16 182 3 8 1333 556 323 64 4 chrX 98052801 98053081 -68597215 - L1ME3 LINE L1 -240 5922 5626 8 1333 592 233 127 39 chrX 98053123 98053217 -68597079 + ORR1D2 LTR MaLR 74 192 -178 8 1333 1525 36 108 0 chrX 98053217 98053411 -68596885 + L1_Mus1 LINE L1 6349 6563 -4 8 1333 216 0 0 0 chrX 98053417 98053441 -68596855 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 8 1333 592 233 127 39 chrX 98053441 98053598 -68596698 + ORR1D2 LTR MaLR 199 355 -15 8 1333 383 230 171 42 chrX 98053613 98053874 -68596422 - L1ME3 LINE L1 -713 5449 5149 8 1333 856 170 7 0 chrX 98053874 98054021 -68596275 - B1_Mus1 SINE Alu 0 148 1 8 1333 283 259 147 91 chrX 98054021 98054167 -68596129 - L1ME3 LINE L1 -998 5148 5015 8 1333 456 280 8 56 chrX 98054167 98054292 -68596004 - PB1 SINE Alu -7 120 2 9 1333 283 259 147 91 chrX 98054292 98054400 -68595896 - L1ME3 LINE L1 -1132 5014 4906 8 1333 35886 25 0 1 chrX 98054391 98061256 -68589040 - L1Md_T LINE L1 0 6585 1 9 1333 673 286 114 62 chrX 98061302 98061854 -68588442 - L1ME3 LINE L1 -1255 4891 4264 8 1333 1616 293 79 30 chrX 98061945 98062515 -68587781 + Tigger9b DNA MER2_type 26 623 -1 9 1333 600 269 93 64 chrX 98062537 98063125 -68587171 - L1MC4a LINE L1 -1572 6423 5762 9 1333 220 360 13 26 chrX 98063311 98063388 -68586908 + ID_B1 SINE B4 65 140 -84 9 1333 281 242 61 0 chrX 98063346 98063412 -68586884 + PB1D7 SINE Alu 18 87 -33 9 1333 1381 81 8 90 chrX 98063593 98063837 -68586459 + Lx4B LINE L1 5677 5900 -1158 9 1333 1024 273 69 69 chrX 98063846 98064331 -68585965 + RMER13A LTR ERVK 2 593 -365 9 1333 809 173 7 0 chrX 98064564 98064714 -68585582 + Lx5 LINE L1 5891 6041 -1009 9 1333 3893 102 91 2 chrX 98064714 98065296 -68585000 + Lx4A LINE L1 6425 7058 0 9 1333 288 297 64 32 chrX 98065503 98065597 -68584699 + ID_B1 SINE B4 81 177 -47 1 1333 301 306 81 10 chrX 98065515 98065614 -68584682 + PB1D10 SINE Alu 10 115 -2 1 1333 916 240 62 83 chrX 98065811 98066147 -68584149 + RMER12 LTR ERVK 994 1322 0 1 1333 238 250 0 0 chrX 98066147 98066192 -68584104 - MTC LTR MaLR -376 45 1 1 1333 269 295 24 16 chrX 98066201 98066325 -68583971 + MER34B-int LTR ERV1 3950 4074 -1282 1 1333 267 330 8 83 chrX 98066491 98066623 -68583673 + MER34B-int LTR ERV1 3972 4093 -843 1 1333 640 190 8 17 chrX 98066706 98066824 -68583472 - PB1D9 SINE Alu -1 119 3 1 1333 28 0 0 0 chrX 98067188 98067216 -68583080 + AT_rich Low_complexity Low_complexity 1 28 0 1 1333 860 230 5 33 chrX 98067216 98067400 -68582896 - B3 SINE B2 -37 179 1 1 1333 256 257 14 0 chrX 98067428 98067498 -68582798 + LTR37B LTR ERV1 342 412 -56 1 1333 2717 46 37 0 chrX 98067755 98068104 -68582192 - L1_Mus1 LINE L1 -1 6566 6205 1 1333 626 294 0 7 chrX 98068136 98068283 -68582013 - RSINE1 SINE B4 -17 148 3 1 1333 2271 260 80 19 chrX 98068316 98069179 -68581117 - L1MC2 LINE L1 -38 6306 5391 1 1333 651 175 48 68 chrX 98069312 98069459 -68580837 - B1_Mur3 SINE Alu -5 144 1 1 1333 362 192 68 0 chrX 98069524 98069597 -68580699 - ID4 SINE ID -4 79 2 1 1333 180 111 0 0 chrX 98069603 98069630 -68580666 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 1333 180 53 79 0 chrX 98069666 98069704 -68580592 + (TCTA)n Simple_repeat Simple_repeat 1 41 0 1 1333 198 71 0 0 chrX 98070392 98070420 -68579876 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1 1333 1218 41 0 0 chrX 98070421 98070566 -68579730 - B1_Mus2 SINE Alu -2 145 1 1 1333 1397 71 16 5 chrX 98070745 98070930 -68579366 + B2_Mm2 SINE B2 2 188 -7 1 1333 339 295 51 16 chrX 98071164 98071350 -68578946 + L1_Mur1 LINE L1 3754 3944 -2202 1 1333 458 215 0 0 chrX 98071747 98071826 -68578470 - ID4_ SINE ID 0 83 5 1 1333 28 79 0 0 chrX 98071993 98072056 -68578240 + AT_rich Low_complexity Low_complexity 1 63 0 1 1333 275 254 45 0 chrX 98072194 98072261 -68578035 + L1M4b LINE L1 15 84 -7250 1 1333 249 282 109 17 chrX 98072365 98072484 -68577812 + L1M4b LINE L1 88 217 -7117 1 1333 276 389 112 25 chrX 98072639 98072879 -68577417 + L1M4b LINE L1 416 676 -6658 1 1333 724 251 125 5 chrX 98073000 98073184 -68577112 + B3 SINE B2 10 215 -1 1 1333 515 219 76 11 chrX 98073191 98073376 -68576920 + L1M4b LINE L1 1460 1656 -5678 1 1333 856 220 42 3 chrX 98073420 98073597 -68576699 + B3A SINE B2 2 174 -24 1 1333 261 0 0 0 chrX 98073597 98073626 -68576670 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1333 560 262 36 47 chrX 98073626 98073640 -68576656 + B2_Mm2 SINE B2 174 190 -5 1 1333 626 301 7 30 chrX 98074096 98074366 -68575930 - L1_Mur3 LINE L1 -2991 2889 2626 1 1333 1335 82 0 49 chrX 98074367 98074572 -68575724 - Lx5 LINE L1 -1091 5959 5765 1 1333 453 286 57 0 chrX 98074731 98074836 -68575460 + PB1D7 SINE Alu 6 116 -4 1 1333 22 0 0 0 chrX 98075075 98075097 -68575199 + AT_rich Low_complexity Low_complexity 1 22 0 1 1333 386 208 14 0 chrX 98076053 98076125 -68574171 - ID4_ SINE ID -10 73 1 1 1333 2148 78 34 58 chrX 98076406 98076733 -68573563 + ORR1A2 LTR MaLR 1 319 -8 1 1333 2632 138 19 39 chrX 98077092 98077553 -68572743 - Lx4A LINE L1 -5 7053 6602 1 1333 525 226 27 7 chrX 98077773 98077920 -68572376 - L1ME3A LINE L1 -193 5980 5831 1 1333 21 36 0 0 chrX 98078551 98078579 -68571717 + AT_rich Low_complexity Low_complexity 1 28 0 1 1333 928 149 0 11 chrX 98079263 98079439 -68570857 + GA-rich Low_complexity Low_complexity 2 175 0 1 1333 368 140 0 0 chrX 98079872 98079929 -68570367 + L1_Mur3 LINE L1 5339 5395 -485 1 1333 5337 142 15 7 chrX 98080036 98080945 -68569351 - L1_Mus4 LINE L1 -528 5355 4439 1 1333 6680 88 60 19 chrX 98080937 98082156 -68568140 + L1_Mus4 LINE L1 5353 6623 -13 1 1333 208 156 0 0 chrX 98082176 98082208 -68568088 + A-rich Low_complexity Low_complexity 1 32 0 1 1333 268 336 56 8 chrX 98082320 98082446 -68567850 - MIR3 SINE MIR -46 162 31 1 1333 769 92 46 0 chrX 98082563 98082693 -68567603 - L1_Mus4 LINE L1 -6 6630 6495 1 1333 3504 186 62 25 chrX 98082693 98083674 -68566622 + L1MCa LINE L1 3972 4589 -1463 1 1333 796 299 0 6 chrX 98083681 98083856 -68566440 - B3 SINE B2 0 216 43 1 1333 225 200 67 0 chrX 98083861 98083906 -68566390 + RLTR27 LTR ERVK 1 48 -261 1 1333 23 0 0 0 chrX 98083975 98083998 -68566298 + AT_rich Low_complexity Low_complexity 1 23 0 1 1333 464 309 32 26 chrX 98083998 98084154 -68566142 - RSINE1 SINE B4 -6 159 3 1 1333 810 264 263 4 chrX 98084315 98084504 -68565792 + L1MCa LINE L1 697 945 -5563 1 1333 369 0 0 0 chrX 98084504 98084545 -68565751 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1333 810 264 263 4 chrX 98084545 98084869 -68565427 + L1MCa LINE L1 946 1342 -5166 1 1333 4455 76 57 2 chrX 98085068 98085684 -68564612 + L1_Mus2 LINE L1 5917 6566 0 1 1333 374 342 124 5 chrX 98085810 98086004 -68564292 + MER21B LTR ERV1 467 683 -180 1 1333 1441 75 0 5 chrX 98086167 98086356 -68563940 + B2_Mm2 SINE B2 1 188 -7 1 1333 690 277 114 84 chrX 98086412 98086771 -68563525 + MER21-int LTR ERV1 2021 2390 -1801 1 1333 607 361 33 23 chrX 98086808 98087109 -68563187 + MER21-int LTR ERV1 2930 3233 -958 1 1333 338 232 89 0 chrX 98087143 98087255 -68563041 + MER4B-int LTR ERV1 4567 4688 -2070 1 1333 597 286 53 65 chrX 98087428 98087690 -68562606 + MER21-int LTR ERV1 3322 3580 -611 1 1333 630 219 8 16 chrX 98087693 98087814 -68562482 - B1_Mur4 SINE Alu -4 146 27 1 1333 580 198 19 0 chrX 98087797 98087903 -68562393 + B1F SINE Alu 35 142 -7 1 1333 1536 266 54 20 chrX 98087908 98088770 -68561526 + L1M2 LINE L1 4882 5780 -520 1 1333 201 94 0 0 chrX 98088770 98088802 -68561494 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 1 1333 213 121 0 0 chrX 98088802 98088834 -68561462 + (CATA)n Simple_repeat Simple_repeat 2 34 0 1 1333 1536 252 47 28 chrX 98088834 98088845 -68561451 + L1M2 LINE L1 5781 5793 -507 1 1333 609 277 42 28 chrX 98088983 98089195 -68561101 + L1MC1 LINE L1 6101 6315 -18 1 1333 2047 280 180 47 chrX 98089204 98090545 -68559751 + Lx9 LINE L1 5843 7362 -282 1 1333 3726 165 115 78 chrX 98090546 98091416 -68558880 + RMER19B LTR ERVK 1 902 0 1 1333 4454 60 44 0 chrX 98091447 98092034 -68558262 + Lx3_Mus LINE L1 6397 7009 0 1 1333 626 241 36 76 chrX 98092075 98092326 -68557970 + Lx9 LINE L1 7358 7598 -46 1 1333 692 191 34 41 chrX 98092407 98092554 -68557742 + B1_Mur1 SINE Alu 4 149 0 1 1333 6065 79 29 10 chrX 98092719 98094302 -68555994 + L1VL2 LINE L1 209 1826 -1789 1 1333 353 292 0 0 chrX 98094444 98094533 -68555763 - PB1D10 SINE Alu -2 115 27 1 1333 1644 15 0 5 chrX 98094752 98094949 -68555347 - L1Md_A LINE L1 -1 6581 6386 1 1333 285 29 0 0 chrX 98095936 98095970 -68554326 + (A)n Simple_repeat Simple_repeat 1 34 0 1 1333 332 299 0 20 chrX 98096108 98096207 -68554089 + PB1D10 SINE Alu 21 117 0 1 1333 2261 155 59 10 chrX 98096366 98096756 -68553540 + MTC LTR MaLR 1 409 -12 1 1333 196 284 53 97 chrX 98096838 98096951 -68553345 - MIRm SINE MIR -130 146 39 1 1333 1064 255 92 12 chrX 98097239 98097564 -68552732 + ORR1D2 LTR MaLR 12 362 -8 1 1333 1187 91 28 6 chrX 98097726 98097902 -68552394 + B2_Mm2 SINE B2 1 180 -15 1 1333 538 247 79 26 chrX 98097911 98098140 -68552156 - L1MC5 LINE L1 -52 7909 7669 1 1333 335 367 47 24 chrX 98098801 98099013 -68551283 - MIR SINE MIR -40 222 6 1 1333 1861 176 92 8 chrX 98099218 98099578 -68550718 + MTC LTR MaLR 18 407 -14 1 1333 192 245 0 0 chrX 98099649 98099702 -68550594 + GA-rich Low_complexity Low_complexity 4 56 0 1 1333 36 40 0 0 chrX 98099895 98099945 -68550351 + AT_rich Low_complexity Low_complexity 1 50 0 1 1333 231 192 11 161 chrX 98100172 98100259 -68550037 + MT2B2 LTR ERVL 176 249 -335 1 1333 432 250 0 10 chrX 98100187 98100284 -68550012 + PB1D10 SINE Alu 22 117 0 1 1333 223 68 43 43 chrX 98100285 98100331 -68549965 + A-rich Low_complexity Low_complexity 4 49 0 1 1333 1445 178 66 0 chrX 98100832 98101118 -68549178 - Lx3C LINE L1 -2 6974 6670 1 1333 1329 148 28 0 chrX 98101118 98101334 -68548962 + Lx3C LINE L1 6435 6656 -320 1 1333 353 252 9 9 chrX 98101746 98101854 -68548442 + T-rich Low_complexity Low_complexity 3 110 0 1 1333 631 155 164 0 chrX 98102192 98102308 -68547988 - Lx4A LINE L1 -87 6971 6837 1 1333 546 191 36 7 chrX 98102308 98102445 -68547851 + Lx7 LINE L1 7556 7696 0 1 1333 828 342 84 19 chrX 98102501 98102930 -68547366 + L2 LINE L2 219 675 -2744 1 1333 199 400 0 9 chrX 98103082 98103188 -68547108 + L2 LINE L2 750 854 -2565 1 1333 2684 266 80 28 chrX 98103253 98104405 -68545891 + Lx8 LINE L1 5487 6735 -738 1 1333 458 227 62 0 chrX 98104406 98104503 -68545793 + ORR1D2 LTR MaLR 3 105 -265 1 1333 759 93 98 85 chrX 98104503 98104639 -68545657 + L1_Mus3 LINE L1 6461 6604 -34 1 1333 1187 68 0 0 chrX 98104639 98104787 -68545509 + B1_Mus1 SINE Alu 1 148 0 1 1333 759 93 98 85 chrX 98104787 98104814 -68545482 + L1_Mus3 LINE L1 6605 6626 -12 1 1333 383 222 48 74 chrX 98105042 98105255 -68545041 + Lx7 LINE L1 7320 7678 -18 1 1333 693 177 84 48 chrX 98105257 98105423 -68544873 + ORR1D2 LTR MaLR 199 370 0 1 1333 837 298 37 47 chrX 98105431 98105812 -68544484 + Lx8 LINE L1 6739 7115 -358 1 1333 600 14 0 0 chrX 98105832 98105901 -68544395 + (TC)n Simple_repeat Simple_repeat 2 70 0 1 1333 22 35 0 0 chrX 98106109 98106138 -68544158 + AT_rich Low_complexity Low_complexity 1 29 0 1 1333 21 57 0 0 chrX 98106235 98106270 -68544026 + AT_rich Low_complexity Low_complexity 1 35 0 1 1333 1141 288 131 23 chrX 98106661 98107321 -68542975 - Lx8 LINE L1 -1053 6420 5694 1 1333 625 323 152 26 chrX 98107322 98107759 -68542537 + L2 LINE L2 966 1462 -1957 1 1333 405 58 0 0 chrX 98107759 98107811 -68542485 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1333 625 323 152 26 chrX 98107811 98107828 -68542468 + L2 LINE L2 1463 1476 -1943 1 1333 629 321 173 32 chrX 98107923 98108421 -68541875 - L2 LINE L2 -1324 2095 1528 1 1333 1228 289 57 6 chrX 98108495 98108826 -68541470 + ORR1E LTR MaLR 2 349 -10 1 1333 927 164 158 0 chrX 98109908 98110091 -68540205 + B3 SINE B2 1 212 -4 1 1333 69 55 0 8 chrX 98110223 98110238 -68540058 + AT_rich Low_complexity Low_complexity 1 15 0 1 1333 358 121 0 0 chrX 98110238 98110304 -68539992 + Lx3A LINE L1 6898 6963 -18 1 1333 69 55 0 8 chrX 98110304 98110417 -68539879 + AT_rich Low_complexity Low_complexity 1 113 0 1 1333 180 0 0 0 chrX 98110420 98110440 -68539856 + (TAAAAA)n Simple_repeat Simple_repeat 3 22 0 2 1333 24 0 0 0 chrX 98110440 98110464 -68539832 + AT_rich Low_complexity Low_complexity 1 24 0 2 1333 1969 130 16 57 chrX 98110722 98111147 -68539149 + RMER17C LTR ERVK 1 408 -2 2 1333 636 226 43 0 chrX 98111158 98111273 -68539023 + B1_Mur1 SINE Alu 9 128 -21 2 1333 276 30 0 0 chrX 98111292 98111325 -68538971 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 2 1333 315 234 16 0 chrX 98111455 98111519 -68538777 - ID4 SINE ID -16 67 3 2 1333 219 225 0 0 chrX 98111554 98111594 -68538702 + (CAT)n Simple_repeat Simple_repeat 2 41 0 2 1333 454 279 14 75 chrX 98111594 98111741 -68538555 - RSINE1 SINE B4 -3 162 25 2 1333 940 229 21 22 chrX 98112179 98112463 -68537833 + ETnERV2-int LTR ERVK 6222 6420 -986 2 1333 378 113 41 27 chrX 98112682 98112755 -68537541 + ETnERV2-int LTR ERVK 7331 7404 -2 2 1333 1676 141 168 6 chrX 98112756 98113113 -68537183 + RLTR9F LTR ERVK 1 415 0 2 1333 1009 242 14 5 chrX 98113114 98113322 -68536974 - ID_B1 SINE B4 -11 213 4 2 1333 246 250 0 65 chrX 98113328 98113366 -68536930 - L1M2 LINE L1 -515 5782 5749 2 1333 2225 146 92 13 chrX 98113366 98113756 -68536540 + MTC LTR MaLR 1 421 0 2 1333 246 250 0 65 chrX 98113756 98113794 -68536502 - L1M2 LINE L1 -549 5748 5711 2 1333 365 296 121 10 chrX 98113795 98114007 -68536289 + L1MD LINE L1 2252 2486 -3660 2 1333 486 233 87 0 chrX 98114010 98114113 -68536183 + RSINE1 SINE B4 3 114 -51 2 1333 333 0 0 0 chrX 98114117 98114154 -68536142 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1333 287 221 14 29 chrX 98114184 98114254 -68536042 + L1M3e LINE L1 1282 1350 -5680 2 1333 693 341 60 7 chrX 98114608 98115024 -68535272 + L1M3e LINE L1 1535 1972 -5058 2 1333 2120 123 0 0 chrX 98115038 98115380 -68534916 + L1_Mur2 LINE L1 4400 4741 -1136 2 1333 1361 96 15 0 chrX 98115375 98115574 -68534722 - L1_Mus1 LINE L1 -465 6102 5901 2 1333 3564 58 2 2 chrX 98115574 98116024 -68534272 + L1_Mus1 LINE L1 6117 6566 -1 2 1333 1445 161 0 0 chrX 98116029 98116278 -68534018 + L1_Mur2 LINE L1 4720 4968 -909 2 1333 334 321 38 0 chrX 98116327 98116433 -68533863 + PB1 SINE Alu 14 123 -4 2 1333 235 45 44 22 chrX 98116477 98116522 -68533774 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 2 1333 788 243 14 0 chrX 98116561 98116701 -68533595 + RSINE1 SINE B4 1 142 -23 2 1333 849 206 126 11 chrX 98116779 98116970 -68533326 + B3 SINE B2 1 213 -3 2 1333 491 284 30 0 chrX 98117023 98117157 -68533139 + B1F2 SINE Alu 1 138 -11 2 1333 321 97 28 127 chrX 98117164 98117199 -68533097 + L1MEf LINE L1 1634 1663 -5345 2 1333 1220 55 0 0 chrX 98117199 98117344 -68532952 + B1_Mm SINE Alu 2 146 -1 2 1333 321 185 136 90 chrX 98117344 98117440 -68532856 + L1MEf LINE L1 1625 1743 -5591 2 1333 844 78 0 0 chrX 98117444 98117560 -68532736 - Lx3_Mus LINE L1 -1213 5796 5681 2 1333 7992 89 41 9 chrX 98117560 98118724 -68531572 + Lx3_Mus LINE L1 5808 7009 0 2 1333 372 340 116 68 chrX 98118735 98119148 -68531148 + L1MEf LINE L1 1909 2341 -4761 2 1333 274 236 55 36 chrX 98119171 98119281 -68531015 + L1MEf LINE L1 2319 2430 -4763 2 1333 572 248 48 33 chrX 98119686 98119956 -68530340 + L1M2 LINE L1 2765 3041 -3804 2 1333 554 296 85 70 chrX 98120315 98120595 -68529701 + L1_Rod LINE L1 1454 1726 -4154 2 1333 208 0 62 0 chrX 98120595 98120627 -68529669 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1333 554 292 115 26 chrX 98120627 98120882 -68529414 + L1_Rod LINE L1 1727 1999 -3848 2 1333 348 24 0 0 chrX 98120882 98120923 -68529373 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1333 554 292 115 26 chrX 98120923 98121092 -68529204 + L1_Rod LINE L1 2000 2194 -3653 2 1333 441 96 99 112 chrX 98121091 98121243 -68529053 - Lx3C LINE L1 0 6976 6827 2 1333 1041 263 67 33 chrX 98121249 98121771 -68528525 + L1_Rod LINE L1 2221 2760 -3087 2 1333 645 284 51 9 chrX 98121773 98121961 -68528335 + B3A SINE B2 2 200 -16 2 1333 2968 261 84 40 chrX 98121964 98122468 -68527828 + L1_Mur3 LINE L1 2755 3268 -2612 2 1333 5126 130 63 36 chrX 98122468 98123346 -68526950 - RMER19B LTR ERVK 0 902 2 2 1333 2968 261 84 40 chrX 98123346 98123694 -68526602 + L1_Mur3 LINE L1 3269 3644 -2236 2 1333 402 129 0 0 chrX 98123694 98123779 -68526517 + (CAGA)n Simple_repeat Simple_repeat 4 88 0 2 1333 2968 261 84 40 chrX 98123779 98124362 -68525934 + L1_Mur3 LINE L1 3645 4273 -1607 2 1333 1155 62 7 0 chrX 98124362 98124508 -68525788 + B1_Mus2 SINE Alu 1 147 0 2 1333 2968 261 84 40 chrX 98124508 98124588 -68525708 + L1_Mur3 LINE L1 4274 4338 -1542 2 1333 1590 301 38 21 chrX 98124590 98125150 -68525146 - Lx8 LINE L1 -862 6611 6043 2 1333 745 255 134 8 chrX 98125419 98125680 -68524616 + Lx8 LINE L1 7096 7389 -84 2 1333 1011 290 80 36 chrX 98125687 98126074 -68524222 + MTD LTR MaLR 11 414 -5 2 1333 389 293 25 19 chrX 98126166 98126326 -68523970 + L1M2 LINE L1 4611 4771 -1372 2 1333 714 275 110 49 chrX 98126334 98126579 -68523717 + MTE2b LTR MaLR 120 379 0 2 1333 270 295 34 43 chrX 98126594 98126711 -68523585 + L1M2 LINE L1 4777 4892 -1251 2 1333 5558 86 50 14 chrX 98126701 98127572 -68522724 + Lx3_Mus LINE L1 6076 6978 -31 2 1333 1164 278 58 27 chrX 98127603 98128050 -68522246 + Lx8 LINE L1 6129 6589 -884 2 1333 2145 96 27 38 chrX 98128052 98128420 -68521876 + L1_Mur1 LINE L1 5178 5541 -345 2 1333 21 0 0 0 chrX 98128944 98128965 -68521331 + AT_rich Low_complexity Low_complexity 1 21 0 2 1333 438 117 0 61 chrX 98129603 98129685 -68520611 + B2_Mm2 SINE B2 113 189 -6 2 1333 2923 191 13 38 chrX 98129689 98130297 -68519999 + RMER1C Other Other 750 1342 0 2 1333 4567 240 48 41 chrX 98130310 98132091 -68518205 + L1_Rod LINE L1 2205 3998 -1849 2 1333 257 189 0 0 chrX 98132091 98132144 -68518152 - MT2A LTR ERVL 0 533 481 2 1333 296 252 50 8 chrX 98132146 98132266 -68518030 - L1M2 LINE L1 -895 5248 5124 2 1333 500 224 142 52 chrX 98132297 98132627 -68517669 + L1_Rod LINE L1 4564 4923 -924 2 1333 238 108 0 0 chrX 98132624 98132661 -68517635 + L1M2 LINE L1 5146 5182 -958 2 1333 315 312 19 100 chrX 98132672 98132832 -68517464 + RMER12 LTR ERVK 711 857 -465 2 1333 389 338 28 38 chrX 98133162 98133374 -68516922 - L1M5 LINE L1 -2862 3284 3075 2 1333 17883 55 1 0 chrX 98133374 98136454 -68513842 - L1Md_F2 LINE L1 0 6582 3499 2 1333 412 348 68 28 chrX 98136749 98137000 -68513296 + L1ME1 LINE L1 5919 6179 0 2 1333 207 154 14 97 chrX 98137080 98137152 -68513144 + (TTATA)n Simple_repeat Simple_repeat 2 67 0 2 1333 394 353 194 13 chrX 98137153 98137601 -68512695 - L3 LINE CR1 -11 4478 3950 2 1333 963 275 95 118 chrX 98137636 98137800 -68512496 - MER2 DNA MER2_type -1 344 173 2 1333 3353 58 11 16 chrX 98137800 98138251 -68512045 + Lx3_Mus LINE L1 6560 7008 -1 2 1333 963 275 95 118 chrX 98138251 98138432 -68511864 - MER2 DNA MER2_type -173 172 7 2 1333 206 62 31 0 chrX 98138479 98138511 -68511785 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 2 1333 268 373 47 26 chrX 98138512 98138746 -68511550 - L3 LINE CR1 -643 3846 3608 2 1333 946 139 190 22 chrX 98139343 98139527 -68510769 - B3 SINE B2 -1 215 1 2 1333 2461 194 75 40 chrX 98139918 98140567 -68509729 + Lx2B LINE L1 6329 7000 0 2 1333 323 296 0 0 chrX 98140993 98141074 -68509222 + ID4 SINE ID 3 83 0 2 1333 310 245 441 7 chrX 98141159 98141304 -68508992 + MT2A LTR ERVL 326 533 0 2 1333 260 301 0 52 chrX 98142319 98142396 -68507900 + ID4_ SINE ID 1 73 -10 2 1333 369 0 0 0 chrX 98143177 98143218 -68507078 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1333 633 229 65 5 chrX 98143417 98143601 -68506695 - L1ME1 LINE L1 -274 6078 5884 2 1333 1739 240 48 15 chrX 98143613 98144006 -68506290 + MTD LTR MaLR 13 418 -1 2 1333 472 277 133 28 chrX 98144018 98144352 -68505944 - L1ME1 LINE L1 -2310 5858 5492 2 1333 368 293 130 50 chrX 98144385 98144418 -68505878 - L1ME1 LINE L1 -1192 5127 5093 2 1333 1205 48 0 0 chrX 98144418 98144563 -68505733 - B1_Mus2 SINE Alu -1 146 2 2 1333 368 293 130 50 chrX 98144563 98144806 -68505490 - L1ME1 LINE L1 -1227 5092 4829 2 1333 583 68 0 22 chrX 98144825 98144915 -68505381 + Lx LINE L1 6553 6640 -14 2 1333 1266 104 10 10 chrX 98144915 98145109 -68505187 + B2_Mm2 SINE B2 1 194 -1 2 1333 632 257 124 11 chrX 98145326 98145511 -68504785 - B3 SINE B2 -10 206 1 2 1333 328 252 71 0 chrX 98145511 98145610 -68504686 - L1ME1 LINE L1 -4153 2262 2157 2 1333 439 296 153 6 chrX 98145729 98145892 -68504404 - B4 SINE B4 0 292 106 2 1333 281 231 177 21 chrX 98145969 98146155 -68504141 - L1ME1 LINE L1 -4484 1916 1702 2 1333 626 252 55 96 chrX 98146265 98146371 -68503925 - L1MB2 LINE L1 -42 6129 6035 2 1333 287 286 14 0 chrX 98146371 98146441 -68503855 + ID4_ SINE ID 2 72 -11 2 1333 626 252 55 96 chrX 98146441 98146646 -68503650 - L1MB2 LINE L1 -137 6034 5831 2 1333 235 288 40 14 chrX 98146743 98146817 -68503479 - ID4 SINE ID -7 76 1 2 1333 228 35 0 0 chrX 98146993 98147022 -68503274 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1333 1459 134 0 0 chrX 98147771 98148009 -68502287 + Lx2A1 LINE L1 6771 7008 0 2 1333 949 298 7 7 chrX 98148064 98148338 -68501958 + B4 SINE B4 2 275 -17 2 1333 741 233 48 142 chrX 98148606 98148916 -68501380 + B4A SINE B4 2 282 -10 2 1333 328 265 58 36 chrX 98149304 98149441 -68500855 - HAL1b LINE L1 -1 2008 1869 2 1333 238 326 48 3 chrX 98149665 98149779 -68500517 - MIR3 SINE MIR -48 160 47 2 1333 414 0 0 0 chrX 98150394 98150440 -68499856 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 1333 499 273 56 7 chrX 98150441 98150585 -68499711 - RSINE1 SINE B4 -12 153 3 2 1333 539 278 27 27 chrX 98150613 98150761 -68499535 - B1F SINE Alu -1 148 1 2 1333 582 273 68 85 chrX 98150764 98151021 -68499275 + L1M4 LINE L1 4540 4809 -1337 2 1333 503 30 0 0 chrX 98151021 98151088 -68499208 + L1Md_T LINE L1 6516 6582 0 2 1333 582 273 68 85 chrX 98151088 98151314 -68498982 + L1M4 LINE L1 4810 5015 -1131 2 1333 34 0 0 0 chrX 98151355 98151389 -68498907 + AT_rich Low_complexity Low_complexity 1 34 0 2 1333 240 265 75 0 chrX 98151389 98151536 -68498760 + L1M3 LINE L1 4266 4423 -1717 2 1333 7039 107 2 6 chrX 98151538 98152779 -68497517 + Lx LINE L1 5416 6648 -6 2 1333 1198 280 92 25 chrX 98152832 98153040 -68497256 + L1M3 LINE L1 4493 4695 -1445 2 1333 631 267 9 89 chrX 98153040 98153254 -68497042 + B3A SINE B2 2 198 0 2 1333 1198 280 92 25 chrX 98153254 98153606 -68496690 + L1M3 LINE L1 4696 5079 -1061 2 1333 2389 114 64 5 chrX 98153606 98153995 -68496301 + Lx2A1 LINE L1 6597 7008 0 2 1333 1198 280 92 25 chrX 98153995 98154154 -68496142 + L1M3 LINE L1 5080 5260 -880 2 1333 452 232 15 81 chrX 98154181 98154317 -68495979 + B4A SINE B4 124 250 -42 2 1333 346 194 0 0 chrX 98154382 98154444 -68495852 + RCHARR1 DNA MER1_type 540 601 -373 2 1333 460 252 118 0 chrX 98154460 98154587 -68495709 + RCHARR1 DNA MER1_type 637 778 -196 2 1333 1123 166 100 14 chrX 98155238 98155519 -68494777 - Lx3C LINE L1 -1 6975 6671 2 1333 552 259 17 10 chrX 98155705 98155929 -68494367 - L1MA4A LINE L1 -260 5896 5671 2 1333 399 244 6 18 chrX 98156178 98156343 -68493953 - L1_Mur3 LINE L1 -387 5496 5355 2 1333 3340 88 101 4 chrX 98156482 98157018 -68493278 + Lx4A LINE L1 6187 6774 -284 2 1333 499 178 30 82 chrX 98157023 98157158 -68493138 - ORR1A2 LTR MaLR -193 134 7 2 1333 749 216 10 31 chrX 98157158 98157311 -68492985 + L1_Mur3 LINE L1 3663 3811 -2069 2 1333 3192 111 43 16 chrX 98157311 98157796 -68492500 + RLTR19 LTR ERVK 1 498 -1 2 1333 749 216 10 31 chrX 98157796 98157838 -68492458 + L1_Mur3 LINE L1 3812 3854 -2026 2 1333 346 176 14 0 chrX 98157834 98157908 -68492388 - L1_Rod LINE L1 -1920 3927 3853 3 1333 2347 274 54 32 chrX 98157956 98158845 -68491451 + Lx9 LINE L1 6431 7377 -267 3 1333 1970 142 113 51 chrX 98158845 98158900 -68491396 - ORR1B1 LTR MaLR 0 394 356 3 1333 272 48 0 23 chrX 98158906 98158949 -68491347 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 3 1333 871 41 152 16 chrX 98158949 98159067 -68491229 - B1_Mus2 SINE Alu -10 137 1 3 1333 1970 142 113 51 chrX 98159067 98159382 -68490914 - ORR1B1 LTR MaLR -39 355 1 3 1333 509 272 88 85 chrX 98159382 98159634 -68490662 + Lx9 LINE L1 7378 7629 -15 3 1333 3304 228 60 31 chrX 98159644 98160414 -68489882 + L1_Mur3 LINE L1 3318 4123 -1757 3 1333 6357 99 10 57 chrX 98160414 98161413 -68488883 + Lx3C LINE L1 6023 6974 -2 3 1333 3304 228 60 31 chrX 98161413 98161694 -68488602 + L1_Mur3 LINE L1 4124 4399 -1481 3 1333 835 55 0 0 chrX 98161695 98161804 -68488492 + B1_Mus2 SINE Alu 36 144 -3 3 1333 555 16 0 0 chrX 98161804 98161868 -68488428 + (AATAG)n Simple_repeat Simple_repeat 2 65 0 3 1333 430 250 247 26 chrX 98161868 98162135 -68488161 + L1_Mur3 LINE L1 5093 5418 -462 3 1333 1345 178 261 3 chrX 98163400 98163733 -68486563 + MTD LTR MaLR 1 419 0 3 1333 3765 77 54 0 chrX 98164012 98164749 -68485547 + Lx3_Mus LINE L1 5401 6186 -823 3 1333 7590 85 5 1 chrX 98165063 98166859 -68483437 + L1_Mus3 LINE L1 4828 6633 -5 3 1333 507 333 88 0 chrX 98167813 98168041 -68482255 + MIR SINE MIR 15 262 0 3 1333 293 333 56 0 chrX 98168395 98168503 -68481793 - L2a LINE L2 -4 3422 3309 3 1333 350 232 74 47 chrX 98168503 98168652 -68481644 + CYRA11_Mm Unknown Y-chromosome 164 316 -301 3 1333 945 87 142 6 chrX 98168518 98168680 -68481616 - URR1A DNA MER1_type -6 220 37 3 1333 672 169 34 8 chrX 98168804 98168923 -68481373 + B1_Mur2 SINE Alu 22 143 -6 3 1333 229 136 262 33 chrX 98169050 98169111 -68481185 + ID4_ SINE ID 6 80 -3 3 1333 31 44 0 0 chrX 98169645 98169690 -68480606 + AT_rich Low_complexity Low_complexity 1 45 0 3 1333 390 348 42 25 chrX 98169702 98169820 -68480476 + ID_B1 SINE B4 79 198 -26 3 1333 393 242 75 45 chrX 98169829 98169963 -68480333 - MIRb SINE MIR -46 222 85 3 1333 499 133 31 0 chrX 98170941 98171039 -68479257 - Lx9 LINE L1 -44 7600 7500 3 1333 1238 34 0 0 chrX 98171370 98171517 -68478779 + B1_Mus2 SINE Alu 1 147 0 3 1333 211 149 62 21 chrX 98171964 98172012 -68478284 + CT-rich Low_complexity Low_complexity 6 55 0 3 1333 468 204 0 106 chrX 98172186 98172290 -68478006 - RMER30 DNA MER1_type -2 200 108 3 1333 4213 47 4 2 chrX 98172401 98172918 -68477378 + L1Md_F2 LINE L1 6064 6581 -1 3 1334 180 0 0 0 chrX 98173342 98173362 -68476934 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 1334 243 302 0 0 chrX 98173402 98173465 -68476831 - PB1D7 SINE Alu -6 114 52 3 1334 331 289 117 39 chrX 98174160 98174365 -68475931 + L1ME3 LINE L1 5933 6153 -9 3 1334 25 31 0 0 chrX 98174700 98174732 -68475564 + AT_rich Low_complexity Low_complexity 1 32 0 3 1334 373 204 23 0 chrX 98174833 98174921 -68475375 + Lx3B LINE L1 6884 6973 0 3 1334 444 173 25 109 chrX 98174990 98175191 -68475105 - RMER17C LTR ERVK -135 275 92 3 1334 569 263 94 15 chrX 98175197 98175398 -68474898 + L1MB3 LINE L1 5811 6027 -156 3 1334 587 67 47 9 chrX 98175464 98175570 -68474726 + L1_Mus4 LINE L1 6520 6629 -7 3 1334 3303 186 35 33 chrX 98175656 98176319 -68473977 + Lx7 LINE L1 6261 6924 -772 3 1334 23082 11 2 0 chrX 98176516 98179802 -68470494 - L1Md_A LINE L1 -48 6534 3242 3 1334 765 203 140 6 chrX 98179801 98179979 -68470317 + Lx7 LINE L1 6909 7110 -586 3 1334 998 250 64 29 chrX 98180129 98180442 -68469854 + Lx7 LINE L1 7120 7443 -253 3 1334 247 270 77 35 chrX 98180469 98180638 -68469658 + Lx7 LINE L1 7501 7676 -20 3 1334 348 309 37 0 chrX 98180648 98180729 -68469567 + ORR1E LTR MaLR 13 96 -263 3 1334 297 0 0 0 chrX 98180818 98180851 -68469445 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1334 704 272 70 19 chrX 98181349 98181619 -68468677 - L1MA6 LINE L1 -80 6220 5937 3 1334 1835 183 12 6 chrX 98181654 98181978 -68468318 + MTD LTR MaLR 1 326 -93 3 1334 1626 195 20 3 chrX 98182389 98182693 -68467603 - MTC LTR MaLR -8 413 105 3 1334 1384 96 5 0 chrX 98182693 98182891 -68467405 - Lx2A1 LINE L1 -1033 5975 5777 3 1334 261 146 21 0 chrX 98182887 98182935 -68467361 + Lx2B LINE L1 6239 6287 -713 3 1334 683 231 66 164 chrX 98182935 98183282 -68467014 + RLTR9C LTR ERVK 1 313 -80 3 1334 3988 141 14 47 chrX 98183293 98184036 -68466260 + Lx2B LINE L1 6283 7000 0 3 1334 1423 229 42 53 chrX 98184077 98184455 -68465841 + ORR1D1 LTR MaLR 1 374 0 3 1334 1053 205 42 79 chrX 98184455 98184720 -68465576 + ORR1D1-int LTR MaLR 1 255 -1115 3 1334 540 299 94 58 chrX 98184723 98185085 -68465211 - L1_Rod LINE L1 -389 5458 5084 3 1334 302 218 118 10 chrX 98185230 98185332 -68464964 + L1MA9 LINE L1 5228 5340 -803 3 1334 494 202 35 0 chrX 98185338 98185452 -68464844 + L1MA4 LINE L1 5794 5911 -389 3 1334 329 245 10 96 chrX 98185649 98185800 -68464496 + L1MA9 LINE L1 5329 5462 -838 3 1334 524 310 35 7 chrX 98185853 98185996 -68464300 + RSINE1 SINE B4 5 151 -14 3 1334 1099 302 24 20 chrX 98186042 98186504 -68463792 + L1MA9 LINE L1 5487 5925 -1548 3 1334 672 276 35 0 chrX 98186668 98186838 -68463458 - MTE2b LTR MaLR 0 379 204 3 1334 2042 163 28 54 chrX 98186905 98187293 -68463003 + ORR1C1 LTR MaLR 1 378 0 3 1334 315 0 0 0 chrX 98187555 98187590 -68462706 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 1334 481 188 143 25 chrX 98187629 98187778 -68462518 + B3 SINE B2 1 169 -26 3 1334 387 0 0 0 chrX 98187778 98187821 -68462475 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 3 1334 2308 101 102 18 chrX 98187823 98188205 -68462091 - Lx LINE L1 -7 6647 6234 3 1334 418 218 138 61 chrX 98188205 98188233 -68462063 + B2_Mm2 SINE B2 170 195 0 3 1334 348 233 14 0 chrX 98188376 98188449 -68461847 - MTE2b LTR MaLR -305 74 1 3 1334 634 235 67 40 chrX 98188570 98188896 -68461400 + L1M4b LINE L1 3406 3686 -3648 3 1334 486 237 11 0 chrX 98188896 98188989 -68461307 + ID_B1 SINE B4 79 172 -52 3 1334 1218 265 99 28 chrX 98189094 98189882 -68460414 + L1M4 LINE L1 2469 3312 -2834 3 1334 21 57 0 0 chrX 98190214 98190249 -68460047 + AT_rich Low_complexity Low_complexity 1 35 0 3 1334 31 0 0 0 chrX 98190307 98190338 -68459958 + AT_rich Low_complexity Low_complexity 1 31 0 3 1334 315 235 110 25 chrX 98190383 98190501 -68459795 - Lx8 LINE L1 -1 7472 7345 3 1334 267 300 119 21 chrX 98190696 98190839 -68459457 + Lx9 LINE L1 5833 5989 -1655 3 1334 402 21 0 0 chrX 98191036 98191083 -68459213 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1334 248 233 0 32 chrX 98191286 98191348 -68458948 - BC1_Mm scRNA scRNA -62 90 31 3 1334 273 119 0 0 chrX 98191604 98191646 -68458650 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 3 1334 351 220 286 0 chrX 98191682 98191773 -68458523 - B1F SINE Alu -32 117 1 3 1334 386 39 19 0 chrX 98191905 98191957 -68458339 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1334 789 220 0 21 chrX 98191969 98192113 -68458183 - RSINE1 SINE B4 -23 142 2 3 1334 310 375 43 36 chrX 98192556 98192767 -68457529 + L1M3e LINE L1 545 734 -6296 3 1334 919 168 17 23 chrX 98193010 98193187 -68457109 + B2_Mm2 SINE B2 1 176 -19 3 1334 297 219 90 45 chrX 98193194 98193371 -68456925 + L1M3e LINE L1 2067 2251 -4786 3 1334 35 24 0 0 chrX 98193371 98193413 -68456883 + AT_rich Low_complexity Low_complexity 1 42 0 3 1334 1459 44 16 21 chrX 98193423 98193610 -68456686 + B2_Mm2 SINE B2 1 186 -9 3 1334 3970 109 14 0 chrX 98193610 98194181 -68456115 + Lx3B LINE L1 6395 6973 0 3 1334 1614 21 5 0 chrX 98194235 98194421 -68455875 + B2_Mm1a SINE B2 2 188 -5 3 1334 479 62 12 36 chrX 98194425 98194554 -68455742 + L1Md_F2 LINE L1 6502 6582 0 3 1334 362 78 78 0 chrX 98194776 98194840 -68455456 + L1_Mur2 LINE L1 2990 3058 -2819 3 1334 306 73 0 0 chrX 98194840 98194881 -68455415 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 1334 1284 89 0 0 chrX 98194881 98195061 -68455235 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1334 3987 121 52 59 chrX 98195064 98195803 -68454493 + L1_Mur2 LINE L1 3028 3746 -2131 3 1334 189 0 0 0 chrX 98195803 98195824 -68454472 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 3 1334 3987 121 52 59 chrX 98195824 98195884 -68454412 + L1_Mur2 LINE L1 3747 3822 -2055 3 1334 1385 129 19 88 chrX 98195902 98196165 -68454131 - ORR1A3 LTR MaLR -77 249 5 3 1334 3963 111 59 19 chrX 98196168 98196833 -68453463 + L1_Mur2 LINE L1 3820 4510 -1367 3 1334 556 335 63 7 chrX 98197021 98197307 -68452989 + MT2A LTR ERVL 230 531 -2 3 1334 349 290 58 65 chrX 98197309 98197586 -68452710 + ERVL-int LTR ERVL 1 275 -5439 3 1334 2221 274 41 29 chrX 98197575 98198206 -68452090 + ERVL-int LTR ERVL 3761 4399 -1315 3 1334 3043 46 12 34 chrX 98198217 98198626 -68451670 + MTB LTR MaLR 1 400 0 3 1334 318 127 16 0 chrX 98198690 98198753 -68451543 - MurERV4-int LTR ERVK -5054 206 143 3 1334 225 215 60 60 chrX 98198754 98198838 -68451458 - RMER4B LTR ERVK -484 101 18 3 1334 3074 252 107 18 chrX 98198848 98199799 -68450497 + ERVL-int LTR ERVL 4440 5475 -282 3 1334 541 154 8 39 chrX 98199834 98199962 -68450334 - Lx9 LINE L1 0 7644 7521 3 1334 303 180 33 0 chrX 98199973 98200034 -68450262 - Lx9 LINE L1 -186 7458 7396 3 1334 555 200 54 39 chrX 98200044 98200132 -68450164 - ORR1D1 LTR MaLR 0 374 285 3 1334 2741 246 66 75 chrX 98200132 98200485 -68449811 + RLTR25A LTR ERVK 1 334 -769 3 1334 1014 75 201 0 chrX 98200485 98200644 -68449652 + B2_Mm1t SINE B2 1 191 -2 3 1334 2741 204 56 180 chrX 98200644 98201528 -68448768 + RLTR25A LTR ERVK 335 1028 0 3 1334 947 234 25 36 chrX 98201541 98201758 -68448538 - ORR1D1 LTR MaLR -164 210 27 3 1334 1787 167 84 3 chrX 98201758 98201928 -68448368 + ORR1C2 LTR MaLR 1 181 -203 3 1334 426 20 0 0 chrX 98201928 98201979 -68448317 + (TATG)n Simple_repeat Simple_repeat 2 52 0 3 1334 1787 167 84 3 chrX 98201979 98202163 -68448133 + ORR1C2 LTR MaLR 182 383 -1 3 1334 947 223 19 33 chrX 98202163 98202189 -68448107 - ORR1D1 LTR MaLR -348 26 1 3 1334 571 274 148 0 chrX 98202190 98202427 -68447869 + ERVL-int LTR ERVL 5486 5757 0 3 1334 812 301 124 23 chrX 98202427 98202910 -68447386 + MT2A LTR ERVL 1 532 -1 3 1334 197 33 0 32 chrX 98203131 98203162 -68447134 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 3 1334 452 179 13 0 chrX 98203248 98203326 -68446970 + B1_Mur1 SINE Alu 44 122 -27 3 1334 4570 259 39 40 chrX 98203464 98205171 -68445125 + Lx7 LINE L1 4458 6169 -1527 3 1334 1134 71 0 0 chrX 98205171 98205311 -68444985 + B1_Mus2 SINE Alu 1 140 -7 3 1334 489 97 0 0 chrX 98205348 98205420 -68444876 + (CA)n Simple_repeat Simple_repeat 2 73 0 3 1334 405 0 0 0 chrX 98205645 98205690 -68444606 + (TC)n Simple_repeat Simple_repeat 1 45 0 3 1334 1128 69 0 0 chrX 98205959 98206104 -68444192 + B1_Mus1 SINE Alu 4 148 0 3 1334 22 0 0 0 chrX 98206123 98206145 -68444151 + AT_rich Low_complexity Low_complexity 1 22 0 3 1334 1064 301 102 32 chrX 98206215 98206744 -68443552 + Lx7 LINE L1 6739 7304 -169 3 1334 738 71 0 0 chrX 98207396 98207495 -68442801 + B1_Mus2 SINE Alu 49 147 0 3 1334 917 164 0 0 chrX 98207646 98207786 -68442510 + B1_Mur3 SINE Alu 1 140 -9 3 1334 396 0 0 0 chrX 98207786 98207830 -68442466 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1334 27 0 0 0 chrX 98207977 98208004 -68442292 + AT_rich Low_complexity Low_complexity 1 27 0 4 1334 739 285 23 110 chrX 98208150 98208450 -68441846 - B4A SINE B4 -14 278 5 4 1334 2594 71 69 0 chrX 98208452 98208910 -68441386 + L1_Mus4 LINE L1 5475 5968 -668 4 1334 605 258 46 4 chrX 98209092 98209255 -68441041 + B3A SINE B2 45 213 -3 4 1334 1391 248 111 52 chrX 98209275 98209944 -68440352 + L1_Mur3 LINE L1 4018 4725 -1155 4 1334 232 220 17 0 chrX 98210031 98210090 -68440206 + L1MC4 LINE L1 7555 7614 -428 4 1334 351 0 0 0 chrX 98211053 98211092 -68439204 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1334 532 233 0 10 chrX 98211102 98211206 -68439090 - B1F1 SINE Alu -46 103 1 4 1334 1081 90 0 7 chrX 98211985 98212131 -68438165 + B1_Mus1 SINE Alu 2 146 -2 4 1334 605 258 30 15 chrX 98212170 98212304 -68437992 + RSINE1 SINE B4 4 139 -26 4 1334 351 0 0 0 chrX 98212306 98212345 -68437951 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1334 261 0 0 0 chrX 98212345 98212374 -68437922 + (CCA)n Simple_repeat Simple_repeat 1 29 0 4 1334 2338 142 57 2 chrX 98212787 98213189 -68437107 - MusHAL1 LINE L1 -1016 1696 1273 4 1334 757 109 16 0 chrX 98213190 98213318 -68436978 + L1_Mur1 LINE L1 5177 5306 -580 4 1334 33187 74 9 5 chrX 98213318 98218560 -68431736 + L1Md_F2 LINE L1 322 5586 -297 4 1334 8136 44 1 2 chrX 98218560 98219554 -68430742 + L1Md_F2 LINE L1 5587 6579 -3 4 1334 2921 121 16 0 chrX 98219633 98220063 -68430233 + L1_Mur1 LINE L1 5291 5727 -159 4 1334 2509 184 58 14 chrX 98220057 98220575 -68429721 + Lx3C LINE L1 6433 6973 -3 4 1334 5465 118 2 1 chrX 98220802 98221617 -68428679 + Lx LINE L1 4956 5771 -112 4 1334 1519 30 0 24 chrX 98221617 98221822 -68428474 + L1Md_F3 LINE L1 6382 6581 -3 4 1334 5097 121 36 56 chrX 98221817 98221874 -68428422 + Lx LINE L1 5783 5835 -819 4 1334 894 25 150 0 chrX 98221874 98221994 -68428302 + B1_Mus1 SINE Alu 1 138 -10 4 1334 1000 136 6 6 chrX 98221994 98222171 -68428125 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 4 1334 5112 121 36 56 chrX 98222171 98223002 -68427294 + Lx LINE L1 5836 6653 -1 4 1334 388 353 87 50 chrX 98223097 98223455 -68426841 + L3 LINE CR1 4071 4441 -48 4 1334 2267 81 0 13 chrX 98223483 98223796 -68426500 - MTB_Mm LTR MaLR 0 407 99 4 1334 5426 14 0 0 chrX 98223796 98224451 -68425845 - L1_Mm LINE L1 -1726 4157 3503 4 1334 7990 31 0 0 chrX 98224451 98225386 -68424910 + L1Md_A LINE L1 5647 6581 -1 4 1334 836 73 0 0 chrX 98225389 98225498 -68424798 - MTB_Mm LTR MaLR -298 109 1 4 1334 210 289 0 0 chrX 98225658 98225703 -68424593 - ID4_ SINE ID -5 78 34 4 1334 700 183 0 23 chrX 98225720 98225849 -68424447 - B1_Mur4 SINE Alu 0 150 25 4 1334 4786 40 5 5 chrX 98225934 98226533 -68423763 + L1Md_F2 LINE L1 5985 6582 0 4 1334 746 248 242 8 chrX 98226563 98226811 -68423485 + RMER15 LTR ERVL 270 575 0 4 1334 250 221 94 8 chrX 98226821 98226949 -68423347 + ORR1B1-int LTR MaLR 616 754 -755 4 1334 1064 49 7 7 chrX 98226845 98226988 -68423308 + B1_Mus1 SINE Alu 6 148 0 4 1334 498 211 28 46 chrX 98227010 98227119 -68423177 - B1_Mus1 SINE Alu -13 135 29 4 1334 28 61 0 0 chrX 98227133 98227182 -68423114 + AT_rich Low_complexity Low_complexity 1 49 0 4 1334 474 235 15 41 chrX 98227316 98227505 -68422791 + B4A SINE B4 3 287 -5 4 1334 853 293 119 19 chrX 98228334 98228612 -68421684 + MTD LTR MaLR 1 294 -125 4 1334 567 0 0 0 chrX 98228612 98228675 -68421621 + (CCTTG)n Simple_repeat Simple_repeat 2 64 0 4 1334 853 293 119 19 chrX 98228675 98228775 -68421521 + MTD LTR MaLR 295 416 -3 4 1334 22 0 0 0 chrX 98228799 98228821 -68421475 + AT_rich Low_complexity Low_complexity 1 22 0 4 1334 808 181 134 6 chrX 98228879 98229051 -68421245 - B2_Mm2 SINE B2 0 195 2 4 1334 1054 37 74 0 chrX 98229356 98229491 -68420805 + B1_Mus2 SINE Alu 2 146 -1 4 1334 348 261 102 0 chrX 98229710 98229798 -68420498 + PB1D10 SINE Alu 19 115 -2 4 1334 570 261 21 76 chrX 98229866 98230011 -68420285 + B1F2 SINE Alu 12 148 -1 4 1334 1134 105 0 0 chrX 98230086 98230258 -68420038 - Lx2 LINE L1 -660 6337 6166 4 1334 248 261 26 136 chrX 98230257 98230302 -68419994 + L1MA4 LINE L1 5490 5531 -772 4 1334 1113 31 0 0 chrX 98230302 98230431 -68419865 + B1_Mm SINE Alu 1 129 -18 4 1334 322 21 21 21 chrX 98230432 98230480 -68419816 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 4 1334 270 248 42 84 chrX 98230480 98230599 -68419697 + L1_Rod LINE L1 5462 5575 -272 4 1334 950 198 167 8 chrX 98230605 98230850 -68419446 - ORR1D1 LTR MaLR -2 372 89 4 1334 433 279 20 0 chrX 98230872 98231019 -68419277 + L1MA4 LINE L1 5696 5845 -455 4 1334 201 39 0 0 chrX 98231170 98231196 -68419100 + (TC)n Simple_repeat Simple_repeat 1 26 0 4 1334 371 255 213 21 chrX 98231764 98231952 -68418344 - MIRc SINE MIR -19 249 26 4 1334 346 316 0 0 chrX 98231966 98232045 -68418251 + PB1 SINE Alu 21 99 -28 4 1334 1482 39 11 6 chrX 98232133 98232316 -68417980 + B2_Mm1t SINE B2 2 185 -8 4 1334 770 183 0 60 chrX 98232354 98232505 -68417791 + B1_Mur2 SINE Alu 1 142 -7 4 1334 987 190 73 20 chrX 98232510 98232714 -68417582 + B3 SINE B2 2 216 0 4 1334 395 247 0 43 chrX 98232736 98232829 -68417467 + B1F1 SINE Alu 1 89 -60 4 1334 457 356 19 6 chrX 98232829 98232990 -68417306 + ORR1D2 LTR MaLR 6 168 -202 4 1334 365 301 79 9 chrX 98233026 98233140 -68417156 - B1F1 SINE Alu -27 122 1 4 1334 403 231 147 94 chrX 98233140 98233295 -68417001 + ORR1D2 LTR MaLR 165 332 -27 4 1334 1919 34 0 29 chrX 98233295 98233536 -68416760 - L1_Mus1 LINE L1 -1 6566 6333 4 1334 403 231 147 94 chrX 98233536 98233563 -68416733 + ORR1D2 LTR MaLR 333 357 -2 4 1334 1281 77 0 18 chrX 98233563 98233734 -68416562 + B2_Mm2 SINE B2 2 169 -26 4 1334 618 191 0 0 chrX 98233735 98233861 -68416435 + (TA)n Simple_repeat Simple_repeat 1 126 0 4 1334 470 296 8 73 chrX 98233998 98234122 -68416174 - B1F SINE Alu 0 117 2 4 1334 27 49 0 0 chrX 98234505 98234546 -68415750 + AT_rich Low_complexity Low_complexity 1 41 0 4 1334 638 271 7 0 chrX 98234636 98234776 -68415520 - ID_B1 SINE B4 0 224 84 4 1334 347 228 42 50 chrX 98234796 98234916 -68415380 - Lx7 LINE L1 -16 7680 7562 4 1334 25 65 0 0 chrX 98235213 98235259 -68415037 + AT_rich Low_complexity Low_complexity 1 46 0 4 1334 744 215 128 0 chrX 98235620 98235815 -68414481 - ID_B1 SINE B4 -2 222 3 4 1334 23 0 0 0 chrX 98235862 98235885 -68414411 + AT_rich Low_complexity Low_complexity 1 23 0 4 1334 1155 64 0 0 chrX 98235885 98236026 -68414270 - B1_Mus2 SINE Alu -6 141 1 4 1334 481 244 61 82 chrX 98236365 98236512 -68413784 + B4 SINE B4 77 220 -72 4 1334 997 95 0 0 chrX 98236381 98236518 -68413778 + B1_Mus2 SINE Alu 11 147 0 4 1334 712 251 48 26 chrX 98236603 98236794 -68413502 - B3 SINE B2 0 216 26 4 1334 1201 68 0 0 chrX 98236930 98237077 -68413219 + B1_Mus1 SINE Alu 2 148 0 4 1334 231 226 89 54 chrX 98237090 98237146 -68413150 + ID4_ SINE ID 26 83 0 4 1334 974 147 0 20 chrX 98237407 98237560 -68412736 + B1_Mur4 SINE Alu 1 150 0 4 1334 29 0 0 0 chrX 98238183 98238212 -68412084 + AT_rich Low_complexity Low_complexity 1 29 0 4 1334 685 209 299 0 chrX 98238215 98238379 -68411917 + B3 SINE B2 1 213 -3 4 1334 210 162 0 0 chrX 98238917 98238954 -68411342 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 1334 499 285 8 23 chrX 98239463 98239596 -68410700 - B1_Mur1 SINE Alu -17 132 2 4 1334 442 330 19 52 chrX 98239596 98239674 -68410622 - ID_B1 SINE B4 -17 207 4 4 1334 22 56 0 0 chrX 98239772 98239808 -68410488 + AT_rich Low_complexity Low_complexity 1 36 0 4 1334 529 177 146 0 chrX 98239983 98240079 -68410217 + B3 SINE B2 4 113 -103 4 1334 25 31 0 0 chrX 98240111 98240143 -68410153 + AT_rich Low_complexity Low_complexity 1 32 0 4 1334 222 269 11 179 chrX 98240470 98240565 -68409731 - ID4 SINE ID -68 84 6 4 1334 1851 256 58 32 chrX 98240895 98241431 -68408865 - Lx5 LINE L1 -19 7031 6482 4 1334 450 293 54 12 chrX 98241451 98241693 -68408603 + L1M5 LINE L1 5566 5817 -307 4 1334 480 194 90 27 chrX 98241880 98241991 -68408305 + PB1D9 SINE Alu 3 120 0 4 1334 1052 71 21 7 chrX 98242131 98242272 -68408024 + B1_Mur4 SINE Alu 3 145 -5 4 1334 263 261 72 6 chrX 98242393 98242481 -68407815 + ID4 SINE ID 15 105 -47 4 1334 23 54 0 0 chrX 98242825 98242862 -68407434 + AT_rich Low_complexity Low_complexity 1 37 0 4 1334 843 216 124 0 chrX 98242999 98243184 -68407112 + B3 SINE B2 3 210 -6 4 1334 279 234 97 3 chrX 98243324 98243401 -68406895 - RSINE1 SINE B4 -209 83 2 4 1334 246 203 68 0 chrX 98243478 98243552 -68406744 + L1M4 LINE L1 4241 4319 -1827 4 1334 307 224 16 2 chrX 98243570 98243637 -68406659 + ID4_ SINE ID 8 74 -78 4 1334 207 0 0 0 chrX 98243637 98243660 -68406636 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1334 288 259 12 36 chrX 98243660 98243676 -68406620 + BC1_Mm scRNA scRNA 75 89 -63 4 1334 363 263 115 6 chrX 98243726 98243883 -68406413 + L1M4 LINE L1 4383 4556 -1590 4 1334 525 216 76 41 chrX 98243890 98244035 -68406261 - B2_Mm2 SINE B2 -7 188 39 4 1334 904 240 121 11 chrX 98244057 98244428 -68405868 + L1M4 LINE L1 4571 4982 -1164 4 1334 1024 222 20 0 chrX 98244437 98244640 -68405656 + B3 SINE B2 1 207 -9 4 1334 492 258 135 31 chrX 98244704 98244896 -68405400 + B3A SINE B2 1 212 -4 4 1334 342 214 96 3 chrX 98244899 98245013 -68405283 + Lx6 LINE L1 7305 7417 -43 4 1334 345 100 0 0 chrX 98245021 98245071 -68405225 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 1334 464 364 28 28 chrX 98245119 98245263 -68405033 - RSINE1 SINE B4 -19 146 3 4 1334 275 283 52 52 chrX 98245484 98245581 -68404715 + PB1D7 SINE Alu 18 114 -6 4 1334 392 194 174 0 chrX 98245496 98245589 -68404707 + B4A SINE B4 120 229 -63 5 1334 305 227 142 12 chrX 98245589 98245755 -68404541 + B3A SINE B2 1 189 -6 5 1334 2446 138 58 2 chrX 98246878 98247277 -68403019 + MTC LTR MaLR 1 421 0 5 1334 997 23 148 0 chrX 98247456 98247584 -68402712 + B1_Mm SINE Alu 1 147 0 5 1334 261 260 0 0 chrX 98248268 98248318 -68401978 + B4A SINE B4 82 131 -161 5 1334 1062 138 23 88 chrX 98248675 98248801 -68401495 + L1_Mur2 LINE L1 2039 2155 -3722 5 1334 1163 126 16 0 chrX 98248801 98248983 -68401313 + B2_Mm1a SINE B2 1 185 -8 5 1334 1062 138 23 88 chrX 98248983 98249118 -68401178 + L1_Mur2 LINE L1 2156 2283 -3594 5 1334 253 281 0 15 chrX 98249150 98249215 -68401081 - BC1_Mm scRNA scRNA -73 79 16 5 1334 641 56 22 0 chrX 98249281 98249370 -68400926 + (TTTC)n Simple_repeat Simple_repeat 4 94 0 5 1334 622 117 43 0 chrX 98249446 98249540 -68400756 - B1_Mur3 SINE Alu -28 121 24 5 1334 1185 68 0 0 chrX 98249549 98249695 -68400601 + B1_Mus2 SINE Alu 2 147 0 5 1334 245 231 38 13 chrX 98249753 98249832 -68400464 - Lx7 LINE L1 -4 7692 7612 5 1334 345 109 0 0 chrX 98249838 98249893 -68400403 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 5 1334 764 262 121 26 chrX 98249978 98250284 -68400012 - Lx7 LINE L1 -389 7307 6973 5 1334 234 244 278 0 chrX 98250504 98250594 -68399702 + PB1 SINE Alu 3 117 -10 5 1334 808 149 7 35 chrX 98250671 98250818 -68399478 + B1_Mur4 SINE Alu 7 143 -7 5 1334 760 134 79 0 chrX 98250897 98251024 -68399272 + B1_Mur4 SINE Alu 1 137 -13 5 1334 297 0 0 0 chrX 98251025 98251058 -68399238 + (TTAA)n Simple_repeat Simple_repeat 1 33 0 5 1334 338 289 123 0 chrX 98251080 98251194 -68399102 + MER2 DNA MER2_type 211 338 -7 5 1334 358 261 0 28 chrX 98251442 98251513 -68398783 + ID4_ SINE ID 1 69 -14 5 1334 318 106 0 0 chrX 98251513 98251560 -68398736 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1334 234 284 55 94 chrX 98251813 98251941 -68398355 - MIR SINE MIR -116 152 30 5 1334 665 137 58 33 chrX 98251976 98252097 -68398199 - B1_Mur1 SINE Alu -1 148 25 5 1334 612 220 90 15 chrX 98252077 98252211 -68398085 + B3 SINE B2 72 215 -1 5 1334 247 145 29 0 chrX 98252215 98252284 -68398012 + MER33 DNA MER1_type 215 285 -39 5 1334 1136 36 0 0 chrX 98252284 98252424 -68397872 + B1_Mus1 SINE Alu 6 145 -3 5 1334 23 33 0 0 chrX 98252424 98252454 -68397842 + AT_rich Low_complexity Low_complexity 1 30 0 5 1334 581 254 20 53 chrX 98252510 98252660 -68397636 - B1F SINE Alu -4 145 1 5 1334 232 221 33 133 chrX 98252558 98252678 -68397618 + YREP_Mm Unknown Unknown 217 324 -1488 5 1334 498 46 0 0 chrX 98252921 98252986 -68397310 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1334 634 262 7 13 chrX 98253010 98253161 -68397135 - RSINE1 SINE B4 -13 152 3 5 1334 180 0 0 0 chrX 98253488 98253508 -68396788 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1334 1203 54 0 0 chrX 98253508 98253656 -68396640 - B1_Mus1 SINE Alu 0 148 1 5 1334 557 218 104 8 chrX 98254038 98254172 -68396124 + B1F SINE Alu 2 148 -1 5 1334 858 28 0 0 chrX 98254188 98254295 -68396001 + B1_Mus2 SINE Alu 41 147 0 5 1334 812 37 64 0 chrX 98255358 98255467 -68394829 + B1_Mus1 SINE Alu 33 148 0 5 1334 274 304 25 25 chrX 98255949 98256030 -68394266 + 7SLRNA srpRNA srpRNA 2 82 -232 5 1334 1131 61 0 45 chrX 98256115 98256269 -68394027 + B1_Mus2 SINE Alu 1 147 0 5 1334 975 63 0 0 chrX 98256272 98256399 -68393897 + (GAAA)n Simple_repeat Simple_repeat 2 128 0 5 1334 1270 27 0 0 chrX 98256413 98256560 -68393736 + B1_Mus1 SINE Alu 2 148 0 5 1334 380 143 14 0 chrX 98256561 98256631 -68393665 + GA-rich Low_complexity Low_complexity 2 72 0 5 1334 2003 154 54 10 chrX 98256636 98257043 -68393253 + L1_Mur3 LINE L1 523 947 -6765 5 1334 980 145 72 6 chrX 98257092 98257259 -68393037 + RLTR23 LTR ERV1 253 430 0 5 1334 752 247 37 86 chrX 98257259 98257546 -68392750 + RLTR20B3 LTR ERVK 31 284 -276 5 1334 1179 75 0 0 chrX 98257773 98257920 -68392376 + B1_Mus1 SINE Alu 2 148 0 5 1334 222 150 0 0 chrX 98258332 98258372 -68391924 + (GGA)n Simple_repeat Simple_repeat 3 42 0 5 1334 229 100 40 0 chrX 98258707 98258757 -68391539 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 5 1334 791 256 45 39 chrX 98258898 98259215 -68391081 + RLTR11A LTR ERVK 201 519 -58 5 1334 981 140 0 7 chrX 98259266 98259417 -68390879 - B1_Mur4 SINE Alu 0 150 1 5 1334 638 221 173 6 chrX 98259482 98259655 -68390641 + B3 SINE B2 14 215 -1 5 1334 1961 96 20 100 chrX 98259866 98260040 -68390256 + ORR1A4 LTR MaLR 1 147 -182 5 1334 1109 48 7 40 chrX 98260040 98260191 -68390105 - B1_Mus2 SINE Alu 0 147 2 5 1334 1961 96 20 100 chrX 98260191 98260365 -68389931 + ORR1A4 LTR MaLR 148 321 -8 5 1334 1331 87 33 0 chrX 98260426 98260610 -68389686 + B2_Mm1t SINE B2 1 190 -3 5 1334 362 206 0 0 chrX 98261050 98261113 -68389183 + PB1D9 SINE Alu 18 80 -40 5 1334 645 204 43 7 chrX 98261387 98261525 -68388771 + Tigger7 DNA MER2_type 2339 2481 -10 5 1334 231 280 135 57 chrX 98261528 98261773 -68388523 + MIR SINE MIR 5 267 -1 5 1334 1167 63 0 0 chrX 98261843 98261986 -68388310 - B1_Mus1 SINE Alu -5 143 1 5 1334 341 0 45 0 chrX 98262082 98262126 -68388170 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 5 1334 3473 84 46 0 chrX 98262339 98262839 -68387457 - L1_Mus3 LINE L1 0 6638 6116 5 1334 795 147 85 37 chrX 98263134 98263313 -68386983 + B3 SINE B2 1 181 -14 5 1334 916 53 143 15 chrX 98263326 98263459 -68386837 - B1_Mur4 SINE Alu 0 150 1 5 1334 778 89 71 0 chrX 98263460 98263572 -68386724 - B1_Mur4 SINE Alu -5 145 26 5 1334 1056 101 0 0 chrX 98264185 98264324 -68385972 + B1_Mus2 SINE Alu 1 139 -8 5 1334 190 0 32 32 chrX 98264327 98264358 -68385938 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1334 320 351 56 19 chrX 98264365 98264580 -68385716 + L1MC4 LINE L1 1120 1342 -4873 5 1334 449 105 0 26 chrX 98264596 98264657 -68385639 + (TTTTC)n Simple_repeat Simple_repeat 4 64 0 5 1334 1203 68 0 0 chrX 98264657 98264803 -68385493 - B1_Mm SINE Alu 0 147 2 5 1334 449 105 0 26 chrX 98264803 98264819 -68385477 + (TTTTC)n Simple_repeat Simple_repeat 4 18 0 5 1334 334 70 0 0 chrX 98264859 98264902 -68385394 + L1Md_F2 LINE L1 5544 5586 -297 5 1334 7659 55 7 12 chrX 98264902 98265892 -68384404 + L1Md_F2 LINE L1 5587 6571 -11 5 1334 294 200 0 0 chrX 98266051 98266096 -68384200 - ID SINE ID -154 70 26 5 1334 465 200 163 74 chrX 98266126 98266261 -68384035 - B1_Mur2 SINE Alu -1 148 2 5 1334 236 216 122 98 chrX 98266192 98266274 -68384022 - MT2B LTR ERVL -361 240 157 5 1334 842 160 181 0 chrX 98266366 98266554 -68383742 - RMER6A LTR ERVK 0 756 535 5 1334 449 333 0 75 chrX 98266471 98266630 -68383666 + B4A SINE B4 146 292 0 5 1334 1362 95 16 0 chrX 98266766 98266955 -68383341 + B2_Mm2 SINE B2 1 192 -3 5 1334 594 291 7 26 chrX 98266955 98267107 -68383189 + RSINE1 SINE B4 13 161 -4 5 1334 231 294 29 0 chrX 98267291 98267359 -68382937 - ID4 SINE ID -11 72 3 5 1334 997 144 66 0 chrX 98267414 98267581 -68382715 - B2_Mm2 SINE B2 -17 178 1 5 1334 215 282 86 37 chrX 98267660 98267741 -68382555 - L2 LINE L2 -1880 1539 1455 5 1334 1457 49 0 32 chrX 98268221 98268411 -68381885 - B2_Mm2 SINE B2 -10 185 2 5 1334 423 231 0 84 chrX 98268411 98268542 -68381754 - L1MA5 LINE L1 -22 6278 6158 5 1334 270 0 0 0 chrX 98268681 98268711 -68381585 + (TTTTTG)n Simple_repeat Simple_repeat 6 35 0 5 1334 1138 62 7 7 chrX 98268711 98268858 -68381438 - B1_Mus2 SINE Alu 0 147 1 5 1334 225 191 21 21 chrX 98268896 98268944 -68381352 - ID4 SINE ID -16 67 20 5 1334 246 264 78 86 chrX 98269093 98269209 -68381087 + MT2B2 LTR ERVL 124 238 -346 5 1334 564 230 25 42 chrX 98269126 98269244 -68381052 + ID_B1 SINE B4 76 191 -33 5 1334 729 88 0 0 chrX 98269263 98269365 -68380931 + (GGAA)n Simple_repeat Simple_repeat 3 104 0 5 1334 363 229 152 27 chrX 98269472 98269584 -68380712 + Lx8 LINE L1 7022 7147 -326 5 1334 546 173 105 20 chrX 98269643 98269796 -68380500 + Lx4A LINE L1 6891 7056 -2 5 1334 479 215 93 36 chrX 98269985 98270125 -68380171 - B1_Mur1 SINE Alu -1 148 1 5 1334 782 236 24 29 chrX 98270168 98270338 -68379958 + B3A SINE B2 1 169 -29 5 1334 1074 267 73 42 chrX 98270444 98270800 -68379496 + MTEa LTR MaLR 1 367 -12 5 1334 416 180 11 0 chrX 98270810 98270899 -68379397 - L1MA5 LINE L1 -143 6157 6068 5 1334 296 229 96 69 chrX 98270894 98271082 -68379214 - L1MA4A LINE L1 -124 6179 5987 5 1334 239 154 75 19 chrX 98271240 98271293 -68379003 - PB1D7 SINE Alu 0 120 65 5 1334 507 316 38 0 chrX 98271246 98271379 -68378917 - ID_B1 SINE B4 -5 219 82 5 1334 1168 59 7 0 chrX 98271393 98271546 -68378750 - B2_Mm1t SINE B2 -3 190 37 5 1334 813 122 62 28 chrX 98271964 98272108 -68378188 + B1_Mur4 SINE Alu 2 150 0 5 1334 1092 76 14 7 chrX 98272110 98272256 -68378040 + B1_Mus2 SINE Alu 1 147 0 5 1334 256 271 0 0 chrX 98272284 98272332 -68377964 + ID SINE ID 8 55 -169 5 1334 999 161 25 19 chrX 98272351 98272534 -68377762 - B3 SINE B2 -9 207 37 5 1334 1138 61 0 13 chrX 98272534 98272683 -68377613 - B1_Mus1 SINE Alu 0 148 2 5 1334 2874 139 87 41 chrX 98272683 98273222 -68377074 + RMER2 LTR ERV1 4 567 0 6 1334 701 227 44 102 chrX 98273222 98273262 -68377034 - B3A SINE B2 -161 37 2 5 1334 25 0 0 0 chrX 98273294 98273319 -68376977 + AT_rich Low_complexity Low_complexity 1 25 0 6 1334 396 0 0 0 chrX 98273961 98274005 -68376291 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1334 374 304 122 77 chrX 98274156 98274352 -68375944 + L2b LINE L2 3167 3371 -4 6 1334 985 239 39 0 chrX 98275784 98275989 -68374307 + B3 SINE B2 1 213 -3 6 1334 189 147 0 0 chrX 98276000 98276034 -68374262 + (A)n Simple_repeat Simple_repeat 1 34 0 6 1334 705 252 28 0 chrX 98276349 98276492 -68373804 + B3A SINE B2 2 148 -50 6 1334 318 123 0 0 chrX 98276493 98276550 -68373746 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1334 237 65 0 0 chrX 98276551 98276582 -68373714 + (GA)n Simple_repeat Simple_repeat 2 32 0 6 1334 983 253 86 8 chrX 98276582 98276825 -68373471 + B4A SINE B4 8 269 -23 6 1334 414 57 0 0 chrX 98276825 98276878 -68373418 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1334 441 0 0 0 chrX 98278764 98278813 -68371483 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1334 364 221 17 103 chrX 98278815 98278931 -68371365 - PB1D7 SINE Alu -14 106 1 6 1334 201 74 0 0 chrX 98279036 98279063 -68371233 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 6 1334 680 176 91 83 chrX 98281038 98281292 -68369004 + RLTR5_Mm LTR ERV1 373 628 0 6 1334 234 91 0 0 chrX 98281323 98281356 -68368940 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1334 25 51 0 0 chrX 98281870 98281909 -68368387 + AT_rich Low_complexity Low_complexity 1 39 0 6 1334 565 291 19 12 chrX 98283448 98283608 -68366688 - MER21B LTR ERV1 -674 189 29 6 1334 343 287 59 0 chrX 98283685 98283786 -68366510 - PB1D10 SINE Alu -6 111 5 6 1334 417 202 67 0 chrX 98283817 98283906 -68366390 - ID_B1 SINE B4 0 224 130 6 1334 276 180 0 16 chrX 98283932 98283994 -68366302 - L1MB7 LINE L1 -43 6141 6081 6 1334 388 200 69 20 chrX 98283995 98284097 -68366199 - RLTR23 LTR ERV1 0 430 324 6 1334 284 215 50 61 chrX 98284515 98284614 -68365682 - L1MB7 LINE L1 -112 6072 5975 6 1334 900 70 139 0 chrX 98285354 98285483 -68364813 + B1_Mus2 SINE Alu 1 147 0 6 1334 2254 184 172 41 chrX 98285535 98286105 -68364191 + RLTR21 LTR ERVK 32 668 -904 6 1334 333 0 0 0 chrX 98286105 98286142 -68364154 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1334 2254 184 172 41 chrX 98286142 98286187 -68364109 + RLTR21 LTR ERVK 669 727 -845 6 1334 5956 151 72 95 chrX 98286192 98286647 -68363649 - Lx5 LINE L1 -1 7049 6579 6 1334 1389 88 5 20 chrX 98286647 98286844 -68363452 + B2_Mm2 SINE B2 1 194 -1 6 1334 5956 151 72 95 chrX 98286844 98287095 -68363201 - Lx5 LINE L1 -472 6578 6360 6 1334 1171 62 0 7 chrX 98287095 98287242 -68363054 - B1_Mus2 SINE Alu 0 147 2 6 1334 5956 151 72 95 chrX 98287242 98287255 -68363041 - Lx5 LINE L1 -691 6359 6349 6 1334 2262 110 81 99 chrX 98287255 98287739 -68362557 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1334 306 26 0 0 chrX 98287741 98287780 -68362516 - tRNA-Phe-TTY tRNA tRNA 0 76 38 6 1334 5956 151 72 95 chrX 98287780 98288043 -68362253 - Lx5 LINE L1 -702 6346 6059 6 1334 189 0 0 0 chrX 98288043 98288064 -68362232 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 1334 5956 151 72 95 chrX 98288064 98288365 -68361931 - Lx5 LINE L1 -992 6058 5752 6 1334 2959 59 1 0 chrX 98288365 98288766 -68361530 - L1_Mus2 LINE L1 -650 5916 5516 6 1334 14281 137 34 39 chrX 98288789 98289140 -68361156 - L1_Mur3 LINE L1 -2032 3845 3483 6 1334 197 33 33 0 chrX 98289140 98289170 -68361126 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 1334 1201 43 0 0 chrX 98289171 98289310 -68360986 - B1_Mus1 SINE Alu -9 139 1 6 1334 389 20 20 0 chrX 98289313 98289363 -68360933 + (TTCC)n Simple_repeat Simple_repeat 3 53 0 6 1334 14281 137 34 39 chrX 98289363 98290488 -68359808 - L1_Mur3 LINE L1 -2395 3482 2327 6 1334 1179 49 7 0 chrX 98290488 98290632 -68359664 - B1_Mm SINE Alu -1 146 2 6 1334 14281 137 34 39 chrX 98290632 98290781 -68359515 - L1_Mur3 LINE L1 -3551 2326 2214 6 1334 1315 96 37 11 chrX 98290781 98290970 -68359326 - B2_Mm2 SINE B2 -1 194 1 6 1334 14281 137 34 39 chrX 98290970 98291126 -68359170 - L1_Mur3 LINE L1 -3664 2213 2055 6 1334 570 15 0 0 chrX 98291126 98291193 -68359103 + (TG)n Simple_repeat Simple_repeat 1 67 0 6 1334 14281 142 32 38 chrX 98291193 98292122 -68358174 - L1_Mur3 LINE L1 -3823 2054 1136 6 1334 1342 102 11 11 chrX 98292122 98292311 -68357985 - B2_Mm1t SINE B2 -3 190 2 6 1334 1576 199 27 48 chrX 98292311 98292569 -68357727 - L1_Mur3 LINE L1 -6593 1135 834 6 1334 1205 166 120 10 chrX 98293027 98293319 -68356977 + RLTR21 LTR ERVK 715 1038 -534 6 1334 335 338 25 31 chrX 98293688 98293831 -68356465 + RSINE1 SINE B4 1 142 -23 6 1334 329 62 21 0 chrX 98293831 98293879 -68356417 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1334 335 338 25 31 chrX 98293879 98293897 -68356399 + RSINE1 SINE B4 143 161 -4 6 1334 692 148 0 52 chrX 98294262 98294397 -68355899 + B1_Mur1 SINE Alu 1 128 -21 6 1334 600 50 0 0 chrX 98294641 98294721 -68355575 + (TC)n Simple_repeat Simple_repeat 1 80 0 6 1334 216 0 0 0 chrX 98294721 98294744 -68355552 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 1334 23 0 0 0 chrX 98294745 98294768 -68355528 + AT_rich Low_complexity Low_complexity 1 23 0 6 1334 1509 63 21 0 chrX 98294808 98294999 -68355297 - B2_Mm2 SINE B2 0 195 1 6 1334 925 162 72 6 chrX 98295128 98295152 -68355144 - B2_Mm1t SINE B2 0 193 159 6 1334 324 0 0 0 chrX 98295152 98295188 -68355108 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 6 1334 1135 71 7 0 chrX 98295188 98295343 -68354953 - B2_Mm2 SINE B2 -38 157 2 6 1334 296 216 139 88 chrX 98295501 98295532 -68354764 + ID_B1 SINE B4 76 143 -81 6 1334 396 181 9 113 chrX 98295532 98295569 -68354727 + PB1D10 SINE Alu 18 51 -66 6 1334 1348 84 21 16 chrX 98295569 98295762 -68354534 + B2_Mm2 SINE B2 2 195 0 6 1334 296 216 139 88 chrX 98295762 98295830 -68354466 + ID_B1 SINE B4 144 219 -5 6 1334 813 114 0 0 chrX 98295851 98295974 -68354322 + (TTCC)n Simple_repeat Simple_repeat 3 125 0 6 1334 295 286 11 45 chrX 98295997 98296085 -68354211 + B3A SINE B2 98 182 -16 6 1334 253 274 16 0 chrX 98296090 98296152 -68354144 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 1334 22 0 0 0 chrX 98296171 98296193 -68354103 + AT_rich Low_complexity Low_complexity 1 22 0 6 1334 354 23 0 0 chrX 98296273 98296316 -68353980 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1334 798 230 18 24 chrX 98296322 98296491 -68353805 - B3A SINE B2 -30 168 1 6 1334 265 286 0 0 chrX 98296923 98296986 -68353310 + PB1D10 SINE Alu 35 97 -20 6 1334 1002 47 116 0 chrX 98297163 98297292 -68353004 + B1_Mus2 SINE Alu 2 145 -2 6 1334 215 114 0 0 chrX 98298107 98298142 -68352154 + ID4_ SINE ID 3 37 -46 6 1334 285 300 0 48 chrX 98298293 98298377 -68351919 - ID4 SINE ID -1 82 3 6 1334 313 305 0 0 chrX 98298383 98298465 -68351831 - ID4 SINE ID 0 83 2 6 1334 503 243 9 18 chrX 98298476 98298589 -68351707 - PB1D10 SINE Alu -5 112 1 6 1334 33 25 0 0 chrX 98298951 98298991 -68351305 + AT_rich Low_complexity Low_complexity 1 40 0 6 1334 696 155 62 8 chrX 98298994 98299124 -68351172 - B1_Mur3 SINE Alu -5 144 8 6 1334 245 358 72 96 chrX 98298997 98299164 -68351132 - B4 SINE B4 -74 218 56 6 1334 522 118 9 113 chrX 98299422 98299537 -68350759 + Lx4B LINE L1 6952 7054 -4 6 1334 264 59 0 0 chrX 98299539 98299573 -68350723 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 6 1334 1681 146 93 20 chrX 98299577 98299920 -68350376 + ORR1C1 LTR MaLR 11 378 0 6 1334 327 250 125 0 chrX 98300039 98300167 -68350129 - L2c LINE L2 -1 3386 3243 6 1334 301 164 0 0 chrX 98300206 98300261 -68350035 + B1_Mus1 SINE Alu 1 55 -93 6 1334 223 232 18 18 chrX 98300288 98300305 -68349991 + (TATATG)n Simple_repeat Simple_repeat 1 17 0 6 1334 252 0 0 0 chrX 98300305 98300333 -68349963 + (TAGA)n Simple_repeat Simple_repeat 1 28 0 6 1334 223 232 18 18 chrX 98300333 98300372 -68349924 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 6 1334 577 201 109 22 chrX 98300507 98300644 -68349652 + B1_Mur2 SINE Alu 1 149 0 6 1334 1170 325 72 40 chrX 98300656 98301348 -68348948 + L1MB8 LINE L1 1 714 -6620 6 1334 614 236 116 15 chrX 98301356 98301615 -68348681 + L1MB8 LINE L1 4878 5184 -1822 6 1334 729 244 32 71 chrX 98301795 98301814 -68348482 + L1MB8 LINE L1 5255 5275 -1731 6 1334 1232 103 43 0 chrX 98301814 98301998 -68348298 + B2_Mm1t SINE B2 2 193 0 6 1334 729 244 32 71 chrX 98301998 98302260 -68348036 + L1MB8 LINE L1 5276 5525 -1481 6 1334 1216 212 38 165 chrX 98302341 98302557 -68347739 - MTE2b LTR MaLR -9 370 181 6 1334 1552 58 0 0 chrX 98302557 98302745 -68347551 - B2_Mm1t SINE B2 -3 190 3 6 1334 1216 212 38 165 chrX 98302745 98302846 -68347450 - MTE2b LTR MaLR -199 180 90 6 1334 1023 97 0 53 chrX 98302846 98302998 -68347298 + B1_Mus1 SINE Alu 5 148 0 6 1334 1216 212 38 165 chrX 98302998 98303103 -68347193 - MTE2b LTR MaLR -290 89 1 6 1334 1434 75 16 0 chrX 98303145 98303333 -68346963 - B2_Mm2 SINE B2 -4 191 1 6 1334 30 0 0 0 chrX 98303743 98303773 -68346523 + AT_rich Low_complexity Low_complexity 1 30 0 6 1335 369 0 0 0 chrX 98304014 98304055 -68346241 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1335 242 186 50 17 chrX 98304180 98304240 -68346056 + ORR1D2 LTR MaLR 1 62 -308 6 1335 578 185 0 8 chrX 98304702 98304833 -68345463 + (TA)n Simple_repeat Simple_repeat 2 131 0 6 1335 536 178 113 13 chrX 98304835 98304994 -68345302 + Lx9 LINE L1 7463 7637 -7 6 1335 429 149 11 84 chrX 98305376 98305471 -68344825 - B1_Mur4 SINE Alu -10 140 53 6 1335 787 243 4 130 chrX 98305511 98305685 -68344611 + ID_B1 SINE B4 3 152 -72 6 1335 1411 85 5 16 chrX 98305685 98305876 -68344420 + B2_Mm1a SINE B2 1 189 -4 6 1335 787 243 4 130 chrX 98305876 98305947 -68344349 + ID_B1 SINE B4 153 217 -7 6 1335 447 19 0 0 chrX 98305947 98305999 -68344297 + (TAAAA)n Simple_repeat Simple_repeat 2 53 0 6 1335 447 277 96 6 chrX 98305999 98306155 -68344141 + L1MB8 LINE L1 5594 5763 -1243 6 1335 15766 42 3 0 chrX 98306208 98308097 -68342199 + L1Md_F3 LINE L1 3693 5586 -297 6 1335 8411 38 4 1 chrX 98308097 98309092 -68341204 + L1Md_F3 LINE L1 5587 6584 0 6 1335 632 229 100 17 chrX 98309163 98309403 -68340893 + L1MB8 LINE L1 5802 6061 -945 6 1335 541 198 26 1 chrX 98309404 98309525 -68340771 + B1_Mur2 SINE Alu 2 129 -20 6 1335 1246 92 0 11 chrX 98309528 98309791 -68340505 + (GAAA)n Simple_repeat Simple_repeat 1 260 0 6 1335 316 276 0 13 chrX 98309791 98309868 -68340428 + GA-rich Low_complexity Low_complexity 4 79 0 6 1335 326 167 178 0 chrX 98309883 98309973 -68340323 + L1MB8 LINE L1 6049 6154 -852 6 1335 1138 312 49 34 chrX 98310045 98310662 -68339634 + L1MB3 LINE L1 5475 6100 -83 6 1335 1212 43 0 0 chrX 98310722 98310863 -68339433 + B1_Mus1 SINE Alu 1 141 -7 6 1335 195 42 0 0 chrX 98310866 98310890 -68339406 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 6 1335 646 247 6 57 chrX 98310899 98311058 -68339238 + RSINE1 SINE B4 4 154 -11 7 1335 28 29 0 0 chrX 98311058 98311093 -68339203 + AT_rich Low_complexity Low_complexity 1 35 0 7 1335 220 265 145 89 chrX 98311122 98311246 -68339050 + B4A SINE B4 44 174 -118 7 1335 238 288 0 0 chrX 98311296 98311355 -68338941 + RSINE1 SINE B4 82 140 -25 7 1335 724 282 154 0 chrX 98311481 98311786 -68338510 + L1MB8 LINE L1 6170 6521 -519 6 1335 1191 61 0 0 chrX 98311786 98311933 -68338363 + B1_Mus2 SINE Alu 1 147 0 7 1335 548 254 135 14 chrX 98311933 98311957 -68338339 + L1MB8 LINE L1 6522 6543 -491 6 1335 961 79 29 0 chrX 98311965 98312105 -68338191 - B2_Mm1t SINE B2 -15 178 35 7 1335 241 43 348 0 chrX 98312105 98312151 -68338145 - Lx5 LINE L1 -1206 5844 5783 7 1335 222 37 0 0 chrX 98312153 98312180 -68338116 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1335 1248 41 0 0 chrX 98312180 98312326 -68337970 - B1_Mm SINE Alu 0 147 2 7 1335 1111 102 6 29 chrX 98312326 98312497 -68337799 - Lx4B LINE L1 -1261 5797 5631 7 1335 4578 109 39 5 chrX 98312497 98313170 -68337126 + Lx4B LINE L1 6352 7047 -11 7 1335 546 264 184 22 chrX 98313243 98313510 -68336786 + L1MB8 LINE L1 6712 7021 -17 6 1335 719 242 79 0 chrX 98313536 98313714 -68336582 + ID_B1 SINE B4 30 221 -3 7 1335 1533 43 38 0 chrX 98313719 98313904 -68336392 + B2_Mm2 SINE B2 1 192 -3 7 1335 454 249 56 120 chrX 98314058 98314291 -68336005 + RMER5 LTR ERV1 15 232 -302 7 1335 336 271 7 91 chrX 98314340 98314494 -68335802 + RMER5 LTR ERV1 387 527 -7 7 1335 709 219 0 232 chrX 98314510 98314790 -68335506 + B3 SINE B2 2 216 0 7 1335 735 194 0 44 chrX 98314861 98314996 -68335300 - B1F2 SINE Alu -16 133 5 7 1335 605 14 14 0 chrX 98315369 98315443 -68334853 + (TG)n Simple_repeat Simple_repeat 1 75 0 7 1335 234 0 0 0 chrX 98315443 98315468 -68334828 + (CG)n Simple_repeat Simple_repeat 2 27 0 7 1335 785 211 26 0 chrX 98315469 98315625 -68334671 - B3A SINE B2 -38 160 1 7 1335 972 49 0 0 chrX 98315651 98315773 -68334523 + (TTTCC)n Simple_repeat Simple_repeat 4 125 0 7 1335 357 24 0 0 chrX 98315774 98315816 -68334480 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 7 1335 638 202 209 23 chrX 98315816 98315988 -68334308 - ID_B1 SINE B4 -12 212 9 7 1335 283 325 142 33 chrX 98316043 98316355 -68333941 + Kanga1 DNA Tc2 1267 1562 -183 7 1335 245 245 180 20 chrX 98316379 98316479 -68333817 + PB1D7 SINE Alu 5 120 0 7 1335 1127 66 0 0 chrX 98316533 98316670 -68333626 + B1_Mus2 SINE Alu 1 137 -10 7 1335 270 21 42 21 chrX 98316670 98316718 -68333578 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 7 1335 775 222 102 0 chrX 98316719 98316886 -68333410 + B3 SINE B2 27 210 -6 7 1335 245 282 63 16 chrX 98317055 98317181 -68333115 + Kanga1d DNA Tc2 423 554 -55 7 1335 523 221 181 28 chrX 98317243 98317420 -68332876 - B3 SINE B2 -12 204 1 7 1335 392 298 51 32 chrX 98317650 98317806 -68332490 + L1M5 LINE L1 5639 5797 -327 7 1335 183 42 0 0 chrX 98318221 98318245 -68332051 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1335 1127 55 0 40 chrX 98318245 98318396 -68331900 - B1_Mus1 SINE Alu -3 145 1 7 1335 379 230 160 0 chrX 98318434 98318534 -68331762 + PB1D10 SINE Alu 1 116 -1 7 1335 368 279 75 46 chrX 98318915 98319088 -68331208 + RMER15 LTR ERVL 347 524 -51 7 1335 1255 48 0 0 chrX 98319269 98319416 -68330880 + B1_Mm SINE Alu 1 147 0 7 1335 387 0 0 0 chrX 98319416 98319459 -68330837 + (A)n Simple_repeat Simple_repeat 1 43 0 7 1335 192 97 0 0 chrX 98319484 98319515 -68330781 + (GCTG)n Simple_repeat Simple_repeat 2 32 0 7 1335 423 0 0 0 chrX 98319557 98319604 -68330692 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 7 1335 395 290 0 0 chrX 98319620 98319720 -68330576 - PB1D10 SINE Alu -17 100 1 7 1335 806 257 17 20 chrX 98319901 98320154 -68330142 + L1MA4 LINE L1 5607 5908 -392 7 1335 1514 53 26 0 chrX 98320154 98320343 -68329953 - B2_Mm2 SINE B2 0 195 2 7 1335 783 276 18 47 chrX 98320343 98320367 -68329929 + L1MA4 LINE L1 5909 5932 -368 7 1335 456 19 0 0 chrX 98320374 98320427 -68329869 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 1335 676 242 37 71 chrX 98320661 98320884 -68329412 + B3A SINE B2 2 195 0 7 1335 570 262 64 0 chrX 98320960 98321132 -68329164 - RMER15 LTR ERVL -15 560 378 7 1335 1231 171 312 3 chrX 98321133 98321495 -68328801 + Lx5 LINE L1 6575 7048 -2 7 1335 2299 149 67 39 chrX 98321605 98322038 -68328258 - RMER1B Other Other -1 1065 621 7 1335 585 195 29 12 chrX 98322032 98322174 -68328122 - RMER1A Other Other -540 526 248 7 1335 353 22 22 0 chrX 98322658 98322704 -68327592 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 7 1335 234 81 0 0 chrX 98322927 98322964 -68327332 + (TGGG)n Simple_repeat Simple_repeat 4 40 0 7 1335 1169 95 0 0 chrX 98322974 98323122 -68327174 - B1_Mus1 SINE Alu 0 148 1 7 1335 680 212 61 71 chrX 98323131 98323329 -68326967 + URR1B DNA MER1_type 28 223 -2 7 1335 229 282 150 72 chrX 98324143 98324296 -68326000 + RSINE1 SINE B4 1 165 0 7 1335 370 356 82 33 chrX 98324327 98324658 -68325638 + Lx8 LINE L1 7016 7362 -111 7 1335 195 42 0 0 chrX 98324729 98324753 -68325543 + (TA)n Simple_repeat Simple_repeat 2 25 0 7 1335 324 310 154 20 chrX 98324839 98325092 -68325204 + HAL1 LINE L1 1578 1864 -643 7 1335 261 306 134 9 chrX 98325138 98325182 -68325114 + ID_B1 SINE B4 92 217 -7 7 1335 276 221 29 0 chrX 98325182 98325250 -68325046 + B1F SINE Alu 73 142 -7 7 1335 285 29 0 0 chrX 98325360 98325394 -68324902 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 1335 796 99 0 16 chrX 98325473 98325596 -68324700 + B1_Mus1 SINE Alu 22 142 -6 7 1335 1167 252 88 83 chrX 98325686 98325834 -68324462 + Lx8 LINE L1 6853 6992 -481 7 1335 731 209 7 7 chrX 98325834 98325983 -68324313 + B1_Mur4 SINE Alu 1 149 -1 7 1335 1167 252 88 83 chrX 98325983 98326232 -68324064 + Lx8 LINE L1 6993 7252 -221 7 1335 253 219 45 68 chrX 98326259 98326347 -68323949 + Lx8 LINE L1 7387 7472 -1 7 1335 370 242 33 11 chrX 98326472 98326564 -68323732 - B3 SINE B2 -25 191 98 7 1335 458 214 61 0 chrX 98326643 98326741 -68323555 - B1_Mur2 SINE Alu -45 104 1 7 1335 636 252 0 21 chrX 98326749 98326891 -68323405 - ID_B1 SINE B4 -2 222 84 7 1335 210 150 0 0 chrX 98326912 98326952 -68323344 + (T)n Simple_repeat Simple_repeat 1 40 0 7 1335 595 230 74 0 chrX 98326953 98327088 -68323208 - ID_B1 SINE B4 -1 223 79 7 1335 453 269 0 9 chrX 98327216 98327325 -68322971 + PB1D10 SINE Alu 1 108 -9 7 1335 204 135 0 0 chrX 98327810 98327847 -68322449 + (T)n Simple_repeat Simple_repeat 1 37 0 7 1335 256 186 0 9 chrX 98327888 98327947 -68322349 + PB1D10 SINE Alu 69 127 0 7 1335 1995 45 12 0 chrX 98328202 98328448 -68321848 + L1Md_A LINE L1 6334 6582 0 7 1335 1643 52 0 0 chrX 98328508 98328701 -68321595 + B2_Mm1t SINE B2 1 193 0 7 1335 255 242 0 0 chrX 98328841 98328903 -68321393 + A-rich Low_complexity Low_complexity 1 62 0 7 1335 212 154 19 0 chrX 98328996 98329048 -68321248 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 1335 626 254 14 0 chrX 98329176 98329318 -68320978 + B1F SINE Alu 6 149 0 7 1335 650 108 0 0 chrX 98329355 98329457 -68320839 + B2_Mm2 SINE B2 2 103 -92 7 1335 641 112 0 18 chrX 98329634 98329743 -68320553 - B1_Mur3 SINE Alu 0 149 43 7 1335 537 86 12 0 chrX 98329900 98329981 -68320315 + B2_Mm2 SINE B2 2 83 -112 7 1335 374 266 70 75 chrX 98330133 98330320 -68319976 + Lx8 LINE L1 7284 7469 -4 7 1335 530 115 0 0 chrX 98330335 98330413 -68319883 - B2_Mm2 SINE B2 -116 79 2 7 1335 330 247 19 97 chrX 98330459 98330562 -68319734 + MLT1B LTR MaLR 1 95 -295 7 1335 211 222 0 0 chrX 98330742 98330787 -68319509 + PB1D10 SINE Alu 67 111 -6 7 1335 535 214 68 63 chrX 98330805 98330995 -68319301 + MLT1B LTR MaLR 194 384 -6 7 1335 626 243 24 78 chrX 98331444 98331649 -68318647 + L1MC5 LINE L1 6612 6805 -1156 7 1335 660 243 48 40 chrX 98331742 98331969 -68318327 + L1MC5 LINE L1 7029 7257 -704 7 1335 230 333 111 0 chrX 98331988 98332087 -68318209 + RSINE1 SINE B4 54 163 -2 7 1335 38 0 0 0 chrX 98332101 98332139 -68318157 + AT_rich Low_complexity Low_complexity 1 38 0 7 1335 479 57 14 0 chrX 98332139 98332209 -68318087 + B1_Mm SINE Alu 77 147 0 7 1335 1453 65 48 0 chrX 98332231 98332417 -68317879 + B2_Mm2 SINE B2 1 195 0 7 1335 478 206 45 36 chrX 98332424 98332535 -68317761 - L1MC5 LINE L1 -1153 6808 6697 7 1335 215 311 0 0 chrX 98332625 98332686 -68317610 + ID4 SINE ID 7 67 -16 7 1335 720 167 68 0 chrX 98332712 98332844 -68317452 + B1_Mur3 SINE Alu 2 142 -7 7 1335 721 194 87 34 chrX 98332942 98333146 -68317150 - B3 SINE B2 0 216 25 7 1335 1409 66 0 6 chrX 98333146 98333328 -68316968 - B2_Mm2 SINE B2 -14 181 1 7 1335 380 290 73 83 chrX 98333328 98333367 -68316929 - B3 SINE B2 -177 39 1 7 1335 29 0 0 0 chrX 98333372 98333401 -68316895 + AT_rich Low_complexity Low_complexity 1 29 0 7 1335 718 254 41 10 chrX 98333407 98333602 -68316694 + B3 SINE B2 3 203 -13 7 1335 28 0 0 0 chrX 98333714 98333742 -68316554 + AT_rich Low_complexity Low_complexity 1 28 0 7 1335 232 286 13 13 chrX 98334139 98334217 -68316079 + ID4 SINE ID 2 79 -4 7 1335 265 236 228 89 chrX 98334396 98334512 -68315784 + MER5A DNA MER1_type 1 138 -51 7 1335 439 248 35 0 chrX 98334512 98334625 -68315671 - MER53 DNA hAT 0 193 77 7 1335 363 211 206 28 chrX 98335017 98335124 -68315172 - B1F SINE Alu -9 140 15 7 1335 424 222 273 7 chrX 98335327 98335481 -68314815 + MER20 DNA MER1_type 1 195 -24 7 1335 274 260 26 0 chrX 98335646 98335723 -68314573 + MIR SINE MIR 120 198 -64 7 1335 236 152 74 43 chrX 98335732 98335787 -68314509 - L2a LINE L2 -14 3412 3303 7 1335 28 0 0 0 chrX 98336145 98336173 -68314123 + AT_rich Low_complexity Low_complexity 1 28 0 7 1335 384 189 0 0 chrX 98336184 98336258 -68314038 + B2_Mm2 SINE B2 3 76 -119 8 1335 385 321 115 70 chrX 98337134 98337409 -68312887 + L1M5 LINE L1 5384 5673 -567 8 1335 833 210 55 32 chrX 98337647 98337864 -68312432 + ID_B1 SINE B4 3 224 0 8 1335 638 266 23 56 chrX 98337873 98338088 -68312208 + B4A SINE B4 1 208 -84 8 1335 280 226 0 75 chrX 98338164 98338231 -68312065 + PB1D9 SINE Alu 51 112 -8 8 1335 354 23 0 0 chrX 98338232 98338275 -68312021 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 8 1335 337 305 24 24 chrX 98338300 98338508 -68311788 + L1MDa LINE L1 1679 1886 -4747 8 1335 1385 252 82 82 chrX 98338605 98338717 -68311579 + L1MC3 LINE L1 6913 7030 -755 8 1335 282 29 0 0 chrX 98338717 98338752 -68311544 + (TTG)n Simple_repeat Simple_repeat 2 36 0 8 1335 1554 33 0 21 chrX 98338752 98338939 -68311357 - B2_Mm1a SINE B2 -9 184 2 8 1335 1385 252 82 82 chrX 98338939 98339500 -68310796 + L1MC3 LINE L1 7031 7586 -199 8 1335 498 281 198 5 chrX 98339506 98339728 -68310568 + B4A SINE B4 2 266 -26 8 1335 317 239 0 0 chrX 98339875 98339942 -68310354 + PB1D10 SINE Alu 51 117 0 8 1335 268 286 48 0 chrX 98340032 98340116 -68310180 + MLT1C LTR MaLR 11 98 -369 8 1335 1034 194 0 51 chrX 98340132 98340328 -68309968 + B3 SINE B2 2 187 -29 8 1335 423 0 0 0 chrX 98340329 98340376 -68309920 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1335 235 288 104 35 chrX 98340467 98340611 -68309685 + MLT1C LTR MaLR 146 299 -168 8 1335 228 159 123 55 chrX 98340747 98340820 -68309476 + L1MDa LINE L1 2538 2615 -4018 8 1335 385 68 11 63 chrX 98340854 98340907 -68309389 + (CAAAAA)n Simple_repeat Simple_repeat 1 50 0 8 1335 1280 27 0 0 chrX 98340907 98341054 -68309242 + B1_Mm SINE Alu 1 147 0 8 1335 385 68 11 63 chrX 98341054 98341095 -68309201 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 8 1335 369 266 168 7 chrX 98341298 98341453 -68308843 + B3A SINE B2 1 180 -18 8 1335 465 294 21 35 chrX 98341652 98341793 -68308503 - B1F2 SINE Alu -9 140 2 8 1335 260 330 89 0 chrX 98342991 98343103 -68307193 + PB1 SINE Alu 1 122 -5 8 1335 253 309 15 0 chrX 98343112 98343180 -68307116 + ID2 SINE ID 3 71 -12 8 1335 570 41 0 0 chrX 98343184 98343257 -68307039 + (TC)n Simple_repeat Simple_repeat 1 73 0 8 1335 240 35 0 0 chrX 98343257 98343285 -68307011 + (CA)n Simple_repeat Simple_repeat 1 29 0 8 1335 462 188 0 0 chrX 98343812 98343897 -68306399 - ID_B1 SINE B4 0 224 140 8 1335 412 271 16 54 chrX 98343974 98344103 -68306193 + RSINE1 SINE B4 2 125 -40 8 1335 327 136 0 0 chrX 98344179 98344238 -68306058 + (CCA)n Simple_repeat Simple_repeat 3 61 0 8 1335 997 248 14 0 chrX 98344265 98344475 -68305821 + ID_B1 SINE B4 9 221 -3 8 1335 1228 57 0 0 chrX 98344484 98344641 -68305655 + B2_Mm2 SINE B2 2 158 -37 8 1335 198 0 0 0 chrX 98344641 98344663 -68305633 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 8 1335 343 252 20 27 chrX 98344831 98344978 -68305318 + L1MB4 LINE L1 5155 5300 -846 8 1335 540 247 159 47 chrX 98344987 98345157 -68305139 - B3A SINE B2 -9 189 1 8 1335 525 287 8 34 chrX 98345187 98345306 -68304990 + RSINE1 SINE B4 6 121 -44 8 1335 508 204 65 50 chrX 98345331 98345470 -68304826 + B1F SINE Alu 1 141 -8 8 1335 373 293 0 0 chrX 98345487 98345562 -68304734 + ID2 SINE ID 6 80 -3 8 1335 609 288 18 67 chrX 98345570 98345734 -68304562 + RSINE1 SINE B4 6 161 -4 8 1335 585 0 0 0 chrX 98345740 98345805 -68304491 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 8 1335 21 82 0 0 chrX 98345948 98345997 -68304299 + AT_rich Low_complexity Low_complexity 1 49 0 8 1335 694 251 142 0 chrX 98345997 98346180 -68304116 + B3 SINE B2 6 214 -2 8 1335 963 228 50 0 chrX 98346195 98346397 -68303899 - B3 SINE B2 -4 212 1 8 1335 1145 261 7 56 chrX 98346453 98346757 -68303539 - B4 SINE B4 -3 289 1 8 1335 930 294 43 28 chrX 98346761 98347536 -68302760 - L1_Mur3 LINE L1 -479 5821 5027 8 1335 1073 233 20 0 chrX 98347575 98347777 -68302519 - B3 SINE B2 -5 211 6 8 1335 1809 270 93 27 chrX 98348056 98348369 -68301927 + L1MB4 LINE L1 5346 5665 -515 8 1335 1215 35 0 0 chrX 98348369 98348507 -68301789 + B1_Mus2 SINE Alu 1 138 -9 8 1335 207 0 0 0 chrX 98348507 98348530 -68301766 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 1335 1809 270 93 27 chrX 98348530 98349003 -68301293 + L1MB4 LINE L1 5666 6180 0 8 1335 280 263 0 0 chrX 98349182 98349239 -68301057 + PB1D10 SINE Alu 1 57 -60 8 1335 617 268 193 42 chrX 98349253 98349491 -68300805 + B4A SINE B4 1 274 -18 8 1335 281 151 2 0 chrX 98349557 98349612 -68300684 + PB1D10 SINE Alu 64 144 -5 8 1335 579 252 114 0 chrX 98349701 98349911 -68300385 + L1MCa LINE L1 1408 1641 -4867 8 1335 266 323 115 0 chrX 98350290 98350386 -68299910 + PB1D10 SINE Alu 4 110 -7 8 1335 541 363 7 0 chrX 98350390 98350536 -68299760 + RSINE1 SINE B4 1 147 -18 8 1335 252 0 0 0 chrX 98350549 98350577 -68299719 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 1335 1001 185 50 10 chrX 98350594 98350796 -68299500 + B3 SINE B2 7 216 0 8 1335 545 189 344 6 chrX 98350826 98350986 -68299310 - B3 SINE B2 0 216 3 8 1335 813 155 85 0 chrX 98350998 98351127 -68299169 - B1_Mur1 SINE Alu -8 141 2 8 1335 291 229 71 0 chrX 98351896 98351966 -68298330 - B1_Mus1 SINE Alu -56 92 18 8 1335 276 258 15 0 chrX 98351922 98351988 -68298308 - B4 SINE B4 -147 145 79 8 1335 307 196 219 42 chrX 98352601 98352697 -68297599 + PB1D7 SINE Alu 1 113 -7 8 1335 216 158 0 0 chrX 98352704 98352742 -68297554 + GA-rich Low_complexity Low_complexity 1 38 0 8 1335 264 341 142 63 chrX 98352818 98353416 -68296880 + L2 LINE L2 2160 2804 -615 8 1335 315 301 103 13 chrX 98353685 98353840 -68296456 - MIRb SINE MIR -27 241 73 8 1335 258 253 101 0 chrX 98353992 98354071 -68296225 - B4A SINE B4 -192 100 14 8 1335 419 239 0 0 chrX 98354003 98354074 -68296222 - ID4 SINE ID -2 81 11 8 1335 273 359 30 30 chrX 98354095 98354227 -68296069 + L2c LINE L2 3256 3387 0 8 1335 491 182 0 129 chrX 98354341 98354442 -68295854 - B3 SINE B2 -124 92 5 8 1335 433 234 13 0 chrX 98354483 98354560 -68295736 + ID4_ SINE ID 4 81 -2 8 1335 368 286 88 0 chrX 98354560 98354574 -68295722 + ID_B1 SINE B4 4 102 -122 8 1335 642 307 167 34 chrX 98354723 98355086 -68295210 + MLT1H2 LTR MaLR 23 467 -82 8 1335 209 322 58 25 chrX 98355153 98355274 -68295022 + L2 LINE L2 1933 2057 -1362 8 1335 244 300 53 53 chrX 98355343 98355438 -68294858 - RSINE1 SINE B4 -17 148 54 8 1335 219 216 78 0 chrX 98355571 98355622 -68294674 - PB1D9 SINE Alu 0 120 66 8 1335 441 244 198 9 chrX 98355579 98355695 -68294601 - ID_B1 SINE B4 -8 216 79 8 1335 854 257 66 16 chrX 98355850 98356155 -68294141 - L1MEc LINE L1 -5496 904 585 8 1335 185 333 90 27 chrX 98356491 98356602 -68293694 - L2 LINE L2 -609 2810 2693 8 1335 2333 89 13 0 chrX 98356611 98356926 -68293370 + ORR1A2 LTR MaLR 1 319 -8 8 1335 472 171 95 43 chrX 98356961 98357077 -68293219 - Lx8 LINE L1 -538 6935 6814 8 1335 1750 148 67 13 chrX 98357077 98357367 -68292929 + ORR1C1 LTR MaLR 6 316 -62 8 1335 243 0 0 0 chrX 98357367 98357394 -68292902 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 8 1335 1750 148 67 13 chrX 98357394 98357418 -68292878 + ORR1C1 LTR MaLR 317 337 -41 8 1335 1216 54 0 0 chrX 98357418 98357566 -68292730 + B1_Mus1 SINE Alu 1 148 0 8 1335 2100 129 0 0 chrX 98357590 98357899 -68292397 - MTC LTR MaLR -106 315 7 8 1335 882 163 37 16 chrX 98357904 98358091 -68292205 - Lx8 LINE L1 -944 6529 6339 8 1335 577 237 65 0 chrX 98358535 98358674 -68291622 - Lx8 LINE L1 -1130 6343 6196 8 1335 655 258 95 30 chrX 98358692 98358754 -68291542 - B3 SINE B2 -3 213 155 8 1335 378 0 0 0 chrX 98358754 98358796 -68291500 + (TG)n Simple_repeat Simple_repeat 1 42 0 8 1335 655 258 95 30 chrX 98358796 98358933 -68291363 - B3 SINE B2 -62 154 1 8 1335 22 0 0 0 chrX 98358934 98358956 -68291340 + AT_rich Low_complexity Low_complexity 1 22 0 8 1335 1805 246 44 47 chrX 98359427 98360100 -68290196 - Lx8 LINE L1 -1546 5927 5227 8 1335 923 162 0 0 chrX 98360105 98360253 -68290043 - B1_Mur3 SINE Alu -1 148 1 8 1335 273 175 86 12 chrX 98360255 98360336 -68289960 - L1_Mur3 LINE L1 -608 5272 5186 8 1335 720 88 0 0 chrX 98360336 98360438 -68289858 + B1_Mus2 SINE Alu 46 147 0 8 1335 210 71 0 0 chrX 98360438 98360466 -68289830 + (A)n Simple_repeat Simple_repeat 1 28 0 8 1335 255 149 119 0 chrX 98360468 98360535 -68289761 - L1M2 LINE L1 -917 5226 5152 8 1335 2588 264 121 8 chrX 98360623 98361684 -68288612 - L1M2 LINE L1 -1184 4959 3780 8 1335 830 208 7 0 chrX 98361696 98361840 -68288456 - B1_Mus2 SINE Alu -1 146 2 8 1335 446 280 40 138 chrX 98361840 98361871 -68288425 - B4 SINE B4 -212 80 67 8 1335 471 212 475 0 chrX 98361883 98362024 -68288272 - B4 SINE B4 -82 210 3 8 1335 287 214 24 12 chrX 98362026 98362111 -68288185 - MER33 DNA MER1_type -89 235 150 8 1335 23 68 0 0 chrX 98362309 98362353 -68287943 + AT_rich Low_complexity Low_complexity 1 44 0 8 1335 23 0 0 0 chrX 98362471 98362494 -68287802 + AT_rich Low_complexity Low_complexity 1 23 0 8 1335 289 238 16 0 chrX 98362996 98363059 -68287237 + ID4_ SINE ID 3 66 -17 8 1335 605 231 44 7 chrX 98363083 98363218 -68287078 + B1_Mur1 SINE Alu 1 140 -9 8 1335 23 0 0 0 chrX 98363221 98363244 -68287052 + AT_rich Low_complexity Low_complexity 1 23 0 8 1335 399 281 11 0 chrX 98363901 98363990 -68286306 + PB1D10 SINE Alu 12 101 -16 8 1335 450 154 0 0 chrX 98364052 98364130 -68286166 + GA-rich Low_complexity Low_complexity 1 78 0 8 1335 252 240 173 90 chrX 98364302 98364435 -68285861 + Charlie4z DNA MER1_type 24 167 0 8 1335 701 262 35 51 chrX 98364808 98364836 -68285460 + B3A SINE B2 2 29 -169 8 1335 1449 63 0 0 chrX 98364836 98365026 -68285270 + L1Md_T LINE L1 6393 6582 0 8 1335 701 262 35 51 chrX 98365026 98365194 -68285102 + B3A SINE B2 30 195 -3 8 1335 977 87 65 0 chrX 98365485 98365623 -68284673 - B1_Mus1 SINE Alu 0 148 2 9 1335 472 305 125 19 chrX 98365714 98366124 -68284172 - L1MB7 LINE L1 -36 6138 5691 9 1335 287 250 40 0 chrX 98366149 98366225 -68284071 - ID2 SINE ID 0 83 5 9 1335 552 237 35 21 chrX 98366232 98366374 -68283922 - B1F SINE Alu -5 144 1 9 1335 459 0 0 0 chrX 98366607 98366658 -68283638 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 9 1335 1019 107 40 0 chrX 98366659 98366809 -68283487 - B2_Mm2 SINE B2 -37 158 3 9 1335 1132 199 40 0 chrX 98366939 98367140 -68283156 + B3 SINE B2 2 210 -6 9 1335 1013 207 45 0 chrX 98367221 98367419 -68282877 + B3 SINE B2 9 215 -1 9 1335 329 347 108 28 chrX 98367476 98367725 -68282571 + L2 LINE L2 2301 2569 -850 9 1335 2034 65 79 3 chrX 98367766 98368057 -68282239 + L1_Mus4 LINE L1 6321 6633 -3 9 1335 1039 234 165 33 chrX 98368058 98368492 -68281804 + L1MA8 LINE L1 5731 6228 -63 9 1335 267 31 0 0 chrX 98368492 98368524 -68281772 + (TA)n Simple_repeat Simple_repeat 1 32 0 9 1335 1039 234 165 33 chrX 98368524 98368580 -68281716 + L1MA8 LINE L1 6229 6285 -6 9 1335 438 225 12 0 chrX 98368590 98368670 -68281626 + RSINE1 SINE B4 18 98 -67 9 1335 726 69 0 0 chrX 98368682 98368783 -68281513 + (GA)n Simple_repeat Simple_repeat 2 102 0 9 1335 416 296 117 27 chrX 98368920 98369142 -68281154 - RMER15 LTR ERVL -15 560 319 9 1335 1334 130 51 0 chrX 98369168 98369383 -68280913 + URR1A DNA MER1_type 1 226 0 9 1335 218 119 0 67 chrX 98369872 98369917 -68280379 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 9 1335 494 213 171 8 chrX 98369918 98370041 -68280255 - B1F1 SINE Alu -6 143 1 9 1335 1033 174 46 69 chrX 98370119 98370335 -68279961 + B3 SINE B2 1 211 -5 9 1335 516 272 120 75 chrX 98370448 98370714 -68279582 + B4 SINE B4 1 278 -14 9 1335 380 198 0 47 chrX 98370888 98370973 -68279323 + B3A SINE B2 1 81 -117 9 1335 523 209 9 9 chrX 98370975 98371081 -68279215 - MTD LTR MaLR -313 106 1 9 1335 3156 58 5 2 chrX 98371110 98371505 -68278791 + MTA_Mm LTR MaLR 1 396 0 9 1335 2447 46 3 0 chrX 98371592 98371895 -68278401 + L1_Mus1 LINE L1 6263 6566 -1 9 1335 546 228 80 7 chrX 98371920 98372057 -68278239 + B1_Mur1 SINE Alu 1 147 -2 9 1335 534 239 31 6 chrX 98372291 98372451 -68277845 + Lx6 LINE L1 7270 7433 -27 9 1335 318 233 130 22 chrX 98372542 98372634 -68277662 - PB1D7 SINE Alu -1 119 18 9 1335 224 300 0 0 chrX 98372592 98372642 -68277654 - B4A SINE B4 -148 144 95 9 1335 879 237 23 1 chrX 98372744 98372932 -68277364 + B3A SINE B2 1 200 -16 9 1335 858 162 232 6 chrX 98372932 98373100 -68277196 + B3 SINE B2 1 206 -10 9 1335 779 222 7 0 chrX 98373144 98373288 -68277008 + B1_Mur2 SINE Alu 4 148 -1 9 1335 297 0 0 0 chrX 98373576 98373609 -68276687 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 9 1335 1270 68 0 6 chrX 98373609 98373771 -68276525 - B2_Mm2 SINE B2 -32 163 3 9 1335 393 306 72 7 chrX 98373952 98374090 -68276206 + B1_Mur1 SINE Alu 1 147 -2 9 1335 266 333 0 0 chrX 98374106 98374178 -68276118 + ID4_ SINE ID 1 72 -11 9 1335 263 325 50 8 chrX 98374399 98374520 -68275776 - MIRb SINE MIR -18 250 125 9 1335 261 0 0 0 chrX 98375058 98375087 -68275209 + (TTG)n Simple_repeat Simple_repeat 2 30 0 9 1335 21 0 0 0 chrX 98375664 98375685 -68274611 + AT_rich Low_complexity Low_complexity 1 21 0 9 1335 663 198 15 80 chrX 98375813 98375950 -68274346 + B1F1 SINE Alu 13 140 -9 9 1335 675 154 0 0 chrX 98375951 98376068 -68274228 + CT-rich Low_complexity Low_complexity 2 118 0 9 1335 301 296 0 0 chrX 98376091 98376162 -68274134 - ID4_ SINE ID -11 72 2 9 1335 769 167 13 46 chrX 98376332 98376483 -68273813 - B1_Mur4 SINE Alu 0 150 5 9 1335 1378 87 11 0 chrX 98376553 98376736 -68273560 - B2_Mm1t SINE B2 -8 185 1 9 1335 201 39 0 0 chrX 98377164 98377190 -68273106 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 9 1335 1123 84 13 6 chrX 98377192 98377348 -68272948 - B2_Mm2 SINE B2 -38 157 1 9 1335 314 301 44 15 chrX 98377633 98377768 -68272528 - ID_B1 SINE B4 0 224 86 9 1335 390 274 16 4 chrX 98377660 98377771 -68272525 - PB1D10 SINE Alu -35 114 2 9 1335 254 386 67 8 chrX 98378016 98378136 -68272160 + RSINE1 SINE B4 4 130 -35 9 1335 677 133 100 0 chrX 98378183 98378333 -68271963 - L1MA8 LINE L1 -2 6289 6125 9 1335 331 352 71 67 chrX 98378735 98378988 -68271308 + L1M4 LINE L1 485 738 -5804 9 1335 418 211 0 0 chrX 98379147 98379223 -68271073 + B2_Mm2 SINE B2 1 76 -119 9 1335 415 211 29 95 chrX 98379551 98379614 -68270682 - B4A SINE B4 -194 98 41 9 1335 1079 262 121 12 chrX 98379614 98379954 -68270342 - MTEb LTR MaLR 0 379 3 9 1335 415 211 29 95 chrX 98379954 98379995 -68270301 - B4A SINE B4 -252 40 1 9 1335 557 278 34 22 chrX 98380094 98380274 -68270022 + ID_B1 SINE B4 44 224 0 9 1335 276 204 0 0 chrX 98380322 98380376 -68269920 + B1F1 SINE Alu 5 58 -91 9 1335 202 194 0 0 chrX 98380383 98380419 -68269877 + GA-rich Low_complexity Low_complexity 4 39 0 9 1335 323 272 38 53 chrX 98380420 98380552 -68269744 + L1MC5 LINE L1 7783 7912 -49 9 1335 281 250 15 15 chrX 98380966 98381031 -68269265 + MER96 DNA hAT 33 97 -78 9 1335 643 246 86 47 chrX 98381196 98381452 -68268844 - MamRep1161 DNA TcMar -423 534 269 9 1335 248 278 111 0 chrX 98381738 98381864 -68268432 + L1MC4 LINE L1 7101 7240 -802 9 1335 218 228 0 186 chrX 98382120 98382190 -68268106 + PB1D7 SINE Alu 1 57 -63 9 1335 473 169 26 0 chrX 98382446 98382523 -68267773 + B3A SINE B2 2 80 -118 9 1335 1776 166 92 99 chrX 98382529 98382728 -68267568 + MTD LTR MaLR 1 200 -219 9 1335 890 156 7 21 chrX 98382728 98382872 -68267424 + B1_Mur4 SINE Alu 1 142 -8 9 1335 1776 166 92 99 chrX 98382872 98383094 -68267202 + MTD LTR MaLR 201 419 0 9 1335 3047 212 71 110 chrX 98383106 98383994 -68266302 + MTD-int LTR MaLR 35 980 -278 9 1335 1605 27 21 0 chrX 98383994 98384182 -68266114 - B2_Mm1t SINE B2 0 193 2 9 1335 3047 209 69 98 chrX 98384182 98384395 -68265901 + MTD-int LTR MaLR 872 1154 -104 9 1335 847 39 0 0 chrX 98384456 98384559 -68265737 - B1_Mus1 SINE Alu -9 139 37 9 1335 447 200 0 0 chrX 98384558 98384643 -68265653 + MTD-int LTR MaLR 1172 1256 -2 9 1335 1430 200 149 30 chrX 98384645 98384980 -68265316 + MTD LTR MaLR 1 375 -44 9 1335 414 246 97 0 chrX 98384999 98385113 -68265183 + B3 SINE B2 82 206 -10 9 1335 740 208 13 51 chrX 98385115 98385272 -68265024 + B3 SINE B2 1 151 -65 9 1335 230 276 0 0 chrX 98386060 98386118 -68264178 - ID_B1 SINE B4 -1 223 166 9 1335 668 262 18 24 chrX 98386169 98386333 -68263963 - RSINE1 SINE B4 -1 164 2 9 1335 776 184 37 0 chrX 98386409 98386545 -68263751 + B1_Mur4 SINE Alu 5 145 -5 9 1335 672 368 82 36 chrX 98386617 98387178 -68263118 + L3 LINE CR1 3481 4067 -422 9 1335 630 237 89 0 chrX 98387327 98387462 -68262834 + ID_B1 SINE B4 52 198 -26 9 1335 342 301 30 70 chrX 98387376 98387476 -68262820 + B1F SINE Alu 32 127 -22 9 1335 26 0 0 0 chrX 98387612 98387638 -68262658 + AT_rich Low_complexity Low_complexity 1 26 0 9 1335 563 299 69 34 chrX 98387638 98387842 -68262454 + B4A SINE B4 82 292 0 9 1335 909 154 0 0 chrX 98388044 98388187 -68262109 + B1_Mur3 SINE Alu 1 143 -6 9 1335 212 0 36 0 chrX 98388189 98388217 -68262079 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9 1335 495 285 29 58 chrX 98388456 98388594 -68261702 - ID_B1 SINE B4 0 224 91 9 1335 402 21 0 0 chrX 98388619 98388666 -68261630 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 1335 695 236 0 106 chrX 98388681 98388861 -68261435 - RSINE1 SINE B4 -1 164 4 9 1335 239 258 56 66 chrX 98388861 98388966 -68261330 + MIRb SINE MIR 80 178 -90 9 1335 409 277 0 12 chrX 98388996 98389080 -68261216 + B1F SINE Alu 3 85 -64 9 1335 941 204 81 30 chrX 98389081 98389278 -68261018 + B3 SINE B2 4 210 -6 9 1335 795 228 0 0 chrX 98389278 98389423 -68260873 - B1_Mus2 SINE Alu -2 145 1 9 1335 359 253 0 12 chrX 98389450 98389530 -68260766 + B1F SINE Alu 71 149 0 9 1335 813 282 5 15 chrX 98389558 98389756 -68260540 + B3A SINE B2 2 197 -1 9 1335 265 255 202 55 chrX 98389763 98390016 -68260280 + L1MC LINE L1 4657 4946 -1200 9 1335 795 199 8 0 chrX 98390109 98390240 -68260056 + B1_Mur1 SINE Alu 17 148 -1 9 1335 202 233 11 11 chrX 98390244 98390331 -68259965 + GA-rich Low_complexity Low_complexity 2 88 0 9 1335 236 216 0 0 chrX 98390433 98390470 -68259826 - ID4 SINE ID -3 80 44 9 1335 540 248 135 0 chrX 98390495 98390636 -68259660 + ID_B1 SINE B4 2 161 -63 9 1335 463 266 119 101 chrX 98390640 98390908 -68259388 + B4 SINE B4 4 276 -16 9 1335 286 270 120 36 chrX 98391002 98391194 -68259102 + L1ME2z LINE L1 5676 5883 -561 9 1335 5664 55 0 3 chrX 98391192 98391886 -68258410 + L1Md_F2 LINE L1 4895 5586 -297 9 1335 8703 46 0 3 chrX 98391886 98392883 -68257413 + L1Md_F2 LINE L1 5587 6580 -2 9 1335 1967 145 25 141 chrX 98392993 98393174 -68257122 + ORR1C2 LTR MaLR 2 171 -213 9 1335 252 77 0 0 chrX 98393174 98393213 -68257083 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 9 1335 1967 145 25 141 chrX 98393213 98393464 -68256832 + ORR1C2 LTR MaLR 172 384 0 9 1335 709 214 70 85 chrX 98393495 98393694 -68256602 + B3A SINE B2 3 198 0 9 1335 838 242 77 31 chrX 98393833 98394029 -68256267 + B3 SINE B2 3 207 -9 9 1335 281 225 55 22 chrX 98394072 98394163 -68256133 + GA-rich Low_complexity Low_complexity 3 96 0 9 1335 255 324 62 21 chrX 98394489 98394681 -68255615 + L1MC LINE L1 5578 5777 -2105 9 1335 424 229 35 79 chrX 98394685 98394799 -68255497 + PB1 SINE Alu 12 120 -7 9 1335 1704 183 126 16 chrX 98394845 98395211 -68255085 + MTD LTR MaLR 2 407 -12 1 1335 312 237 0 26 chrX 98395670 98395748 -68254548 + Charlie4z DNA MER1_type 51 126 -41 1 1335 359 333 192 30 chrX 98395962 98396129 -68254167 + L1M5 LINE L1 4531 4728 -1418 1 1335 391 309 16 0 chrX 98396129 98396252 -68254044 + PB1 SINE Alu 1 125 -2 1 1335 359 333 192 30 chrX 98396252 98396511 -68253785 + L1M5 LINE L1 4729 5025 -1121 1 1335 2863 231 103 18 chrX 98396641 98397408 -68252888 + Lx8 LINE L1 6642 7473 0 1 1335 584 300 7 0 chrX 98397424 98397564 -68252732 + B1_Mur2 SINE Alu 1 141 -8 1 1335 333 277 199 94 chrX 98397588 98397779 -68252517 + ID_B1 SINE B4 2 212 -12 1 1335 892 209 107 44 chrX 98397848 98398053 -68252243 + B4 SINE B4 1 218 -74 1 1335 1380 155 177 24 chrX 98398061 98398512 -68251784 + Lx9 LINE L1 6957 7476 -168 1 1335 180 111 0 0 chrX 98398512 98398539 -68251757 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 1335 434 164 116 8 chrX 98398539 98398648 -68251648 + Lx9 LINE L1 7521 7643 -1 1 1335 769 270 0 18 chrX 98399329 98399495 -68250801 + RSINE1 SINE B4 2 164 -1 1 1335 503 247 78 6 chrX 98399530 98399697 -68250599 + L1MB2 LINE L1 5728 5906 -265 1 1335 573 282 52 26 chrX 98399698 98399851 -68250445 + RSINE1 SINE B4 3 159 -6 1 1335 457 251 58 115 chrX 98399851 98400002 -68250294 + L1MB2 LINE L1 5878 6015 -156 1 1335 2745 170 43 2 chrX 98400002 98400462 -68249834 + Lx LINE L1 6171 6649 -5 1 1335 457 251 55 106 chrX 98400462 98400580 -68249716 + L1MB2 LINE L1 6016 6137 -46 1 1335 593 268 28 21 chrX 98400581 98400726 -68249570 + B1F2 SINE Alu 2 147 -2 1 1335 464 312 0 43 chrX 98400737 98400854 -68249442 + PB1D7 SINE Alu 4 115 -5 1 1335 309 267 109 14 chrX 98400891 98401067 -68249229 + Charlie1a DNA MER1_type 1053 1249 -206 1 1335 437 211 56 111 chrX 98401586 98401730 -68248566 + MT2B LTR ERVL 129 264 -337 1 1335 971 25 17 0 chrX 98401635 98401755 -68248541 + B1_Mus1 SINE Alu 19 140 -8 1 1335 857 81 8 0 chrX 98401755 98401878 -68248418 + (GGAA)n Simple_repeat Simple_repeat 3 126 0 1 1335 1212 88 0 0 chrX 98402741 98402889 -68247407 - B1_Mus1 SINE Alu 0 148 1 1 1335 455 224 65 9 chrX 98402999 98403107 -68247189 + PB1D9 SINE Alu 1 114 -6 1 1335 389 275 191 5 chrX 98403127 98403321 -68246975 + L1MC LINE L1 5574 5803 -2079 1 1335 801 164 75 29 chrX 98403602 98403807 -68246489 - B3 SINE B2 -2 196 3 1 1335 281 244 16 5 chrX 98403813 98403902 -68246394 - B3 SINE B2 0 198 108 1 1335 1171 63 28 14 chrX 98404012 98404157 -68246139 - B1_Mus1 SINE Alu 0 148 2 1 1335 338 258 144 8 chrX 98404209 98404334 -68245962 + B1F1 SINE Alu 1 142 -7 1 1335 23 33 0 0 chrX 98404537 98404567 -68245729 + AT_rich Low_complexity Low_complexity 1 30 0 1 1335 662 240 13 58 chrX 98404697 98404852 -68245444 + B1F SINE Alu 2 149 0 1 1335 383 276 122 0 chrX 98404856 98404979 -68245317 + ID_B1 SINE B4 80 217 -7 1 1335 237 269 204 6 chrX 98405069 98405226 -68245070 + L3b LINE CR1 7 194 -288 1 1335 195 42 0 0 chrX 98405655 98405679 -68244617 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 1335 1281 68 0 0 chrX 98405703 98405850 -68244446 - B1_Mus1 SINE Alu 0 148 2 1 1335 393 259 94 8 chrX 98405935 98406052 -68244244 + B1F2 SINE Alu 18 144 -5 1 1335 238 318 67 22 chrX 98406556 98406568 -68243728 - B1F SINE Alu -4 145 52 1 1335 325 320 0 0 chrX 98406568 98406646 -68243650 - ID_B1 SINE B4 -14 210 133 1 1335 207 261 31 0 chrX 98406920 98406985 -68243311 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 1335 621 72 0 0 chrX 98408060 98408143 -68242153 + (TG)n Simple_repeat Simple_repeat 1 83 0 1 1335 308 227 64 39 chrX 98409535 98409613 -68240683 + ID4_ SINE ID 2 81 -2 1 1335 203 114 57 0 chrX 98409933 98409968 -68240328 + CT-rich Low_complexity Low_complexity 2 38 0 1 1335 431 187 0 0 chrX 98409981 98410056 -68240240 - ID_B1 SINE B4 -33 191 117 1 1335 526 265 181 54 chrX 98410339 98410598 -68239698 + B4A SINE B4 1 292 0 1 1335 228 263 23 106 chrX 98410636 98410768 -68239528 - CR1_Mam LINE CR1 -40 2164 2044 1 1335 598 273 42 7 chrX 98410942 98411086 -68239210 + B1F1 SINE Alu 1 149 0 1 1335 285 304 51 0 chrX 98411160 98411239 -68239057 + ID4 SINE ID 1 83 0 1 1335 313 206 68 0 chrX 98411352 98411425 -68238871 + ID4 SINE ID 4 81 -2 1 1335 460 264 55 36 chrX 98411541 98411706 -68238590 + RLTR42-int LTR ERVK 1230 1397 -4125 1 1335 4597 45 13 2 chrX 98411730 98412265 -68238031 + L1_Mus1 LINE L1 6027 6567 0 1 1335 708 280 74 15 chrX 98412830 98413033 -68237263 - ID_B1 SINE B4 -4 220 6 1 1335 253 231 19 0 chrX 98413039 98413091 -68237205 - PB1D10 SINE Alu -17 100 48 1 1335 291 133 22 0 chrX 98413049 98413094 -68237202 - ID_B1 SINE B4 -53 171 126 1 1335 538 189 111 32 chrX 98413394 98413520 -68236776 + B1_Mur1 SINE Alu 9 144 -5 1 1335 417 66 0 0 chrX 98413841 98413902 -68236394 + (GAAA)n Simple_repeat Simple_repeat 3 63 0 1 1335 577 236 119 58 chrX 98414159 98414402 -68235894 + Lx8 LINE L1 7215 7472 -1 1 1335 531 320 0 0 chrX 98414429 98414551 -68235745 + ID_B1 SINE B4 83 204 -20 1 1335 402 336 73 0 chrX 98414430 98414567 -68235729 + B1F SINE Alu 3 149 0 1 1335 265 257 56 14 chrX 98414620 98414691 -68235605 + RSINE1 SINE B4 49 122 -43 1 1335 668 113 85 0 chrX 98414763 98414869 -68235427 + B3 SINE B2 1 115 -101 1 1335 760 125 16 16 chrX 98415615 98415737 -68234559 + B1_Mus1 SINE Alu 26 147 -1 1 1335 289 198 108 24 chrX 98415790 98415873 -68234423 + MIRb SINE MIR 21 110 -158 1 1335 951 152 14 0 chrX 98415938 98416076 -68234220 + B1_Mur3 SINE Alu 5 144 -5 1 1335 219 139 0 0 chrX 98417880 98417916 -68232380 + (CACG)n Simple_repeat Simple_repeat 4 39 0 1 1335 214 263 137 69 chrX 98418653 98418755 -68231541 - PB1D7 SINE Alu -11 109 1 1 1335 483 233 10 0 chrX 98418780 98418883 -68231413 - ID_B1 SINE B4 -8 216 113 1 1335 1249 43 0 0 chrX 98418969 98419107 -68231189 - B1_Mus2 SINE Alu -9 138 1 1 1335 1171 168 24 19 chrX 98419188 98419394 -68230902 - B3 SINE B2 -8 208 2 1 1335 28 0 0 0 chrX 98419528 98419556 -68230740 + AT_rich Low_complexity Low_complexity 1 28 0 1 1335 369 0 0 0 chrX 98419654 98419695 -68230601 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 1335 916 152 0 7 chrX 98419695 98419825 -68230471 - B1_Mus1 SINE Alu -14 134 5 1 1335 369 326 38 0 chrX 98419910 98420042 -68230254 + B1F SINE Alu 1 137 -12 1 1335 207 0 0 0 chrX 98420042 98420065 -68230231 + (CAAAA)n Simple_repeat Simple_repeat 4 26 0 1 1335 1180 210 0 19 chrX 98420143 98420352 -68229944 + B3 SINE B2 2 206 -10 1 1335 731 251 16 42 chrX 98420760 98420951 -68229345 + B3A SINE B2 2 187 -11 1 1335 265 285 198 24 chrX 98421011 98421137 -68229159 + MIR SINE MIR 2 149 -113 1 1335 964 155 0 0 chrX 98421142 98421290 -68229006 + B1_Mus1 SINE Alu 1 148 0 1 1335 28 0 0 0 chrX 98421349 98421377 -68228919 + AT_rich Low_complexity Low_complexity 1 28 0 1 1335 227 319 148 46 chrX 98421412 98421629 -68228667 - L2 LINE L2 -833 2586 2348 1 1335 264 30 0 0 chrX 98421757 98421790 -68228506 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1 1335 234 143 62 16 chrX 98421837 98421901 -68228395 + (GTTTG)n Simple_repeat Simple_repeat 5 71 0 1 1335 762 176 42 7 chrX 98421902 98422045 -68228251 - B1_Mur4 SINE Alu -2 148 1 1 1335 383 330 28 0 chrX 98422053 98422159 -68228137 - PB1D10 SINE Alu -6 111 3 1 1335 30 45 0 0 chrX 98422159 98422203 -68228093 + AT_rich Low_complexity Low_complexity 1 44 0 1 1335 276 218 129 9 chrX 98422209 98422303 -68227993 + B1F1 SINE Alu 6 140 -9 1 1335 282 329 27 0 chrX 98422339 98422412 -68227884 + ID_B1 SINE B4 84 158 -66 1 1335 757 264 27 31 chrX 98422412 98422635 -68227661 + ID_B1 SINE B4 3 224 0 1 1335 723 275 15 35 chrX 98422636 98422836 -68227460 + B3A SINE B2 1 196 -2 1 1335 859 130 24 0 chrX 98422838 98422961 -68227335 + B1_Mus1 SINE Alu 1 126 -22 1 1335 441 0 0 0 chrX 98422966 98423015 -68227281 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 1335 512 59 15 0 chrX 98423079 98423147 -68227149 - B2_Mm2 SINE B2 -123 72 4 1 1335 645 221 15 0 chrX 98423171 98423302 -68226994 - B3 SINE B2 0 216 84 1 1335 526 241 9 9 chrX 98423301 98423414 -68226882 + B1F2 SINE Alu 37 149 0 1 1335 316 341 0 0 chrX 98423452 98423534 -68226762 + ID4_ SINE ID 2 83 0 1 1335 1157 220 9 0 chrX 98423593 98423807 -68226489 + B3 SINE B2 1 216 0 1 1335 1530 55 0 27 chrX 98423831 98424018 -68226278 + B2_Mm2 SINE B2 4 185 -10 1 1335 408 252 34 51 chrX 98424041 98424158 -68226138 + PB1D7 SINE Alu 3 117 -3 1 1335 578 259 58 45 chrX 98424259 98424413 -68225883 - B3 SINE B2 -41 175 20 1 1335 264 342 0 14 chrX 98424767 98424841 -68225455 - ID4_ SINE ID -8 75 3 1 1335 1173 71 141 6 chrX 98425165 98425335 -68224961 + B2_Mm2 SINE B2 1 193 -2 1 1335 189 139 0 0 chrX 98425525 98425568 -68224728 + (TTTTTG)n Simple_repeat Simple_repeat 4 46 0 1 1335 499 235 50 8 chrX 98425598 98425718 -68224578 - ID_B1 SINE B4 -4 220 96 1 1335 302 169 14 14 chrX 98425783 98425855 -68224441 + Lx5 LINE L1 6976 7047 -3 1 1335 596 182 181 8 chrX 98426320 98426447 -68223849 + B1_Mur2 SINE Alu 1 149 0 1 1335 567 265 0 17 chrX 98426637 98426756 -68223540 - PB1D10 SINE Alu 0 117 1 1 1335 23 0 0 0 chrX 98427212 98427235 -68223061 + AT_rich Low_complexity Low_complexity 1 23 0 1 1335 556 325 57 9 chrX 98427821 98428032 -68222264 - MIR SINE MIR -25 237 17 1 1335 180 111 0 0 chrX 98428097 98428124 -68222172 + (TGGGGG)n Simple_repeat Simple_repeat 3 29 0 1 1335 1546 79 5 0 chrX 98429145 98429335 -68220961 + B2_Mm1t SINE B2 1 191 -2 1 1335 1073 56 7 21 chrX 98429338 98429483 -68220813 + B1_Mus1 SINE Alu 6 148 0 1 1335 189 175 0 0 chrX 98429485 98429525 -68220771 + A-rich Low_complexity Low_complexity 1 40 0 1 1335 337 325 75 19 chrX 98429533 98429693 -68220603 - L2 LINE L2 -926 2493 2325 1 1335 232 250 45 30 chrX 98429974 98430040 -68220256 - ID4_ SINE ID -16 67 1 1 1335 316 310 127 35 chrX 98430877 98431432 -68218864 + L1MEa LINE L1 120 736 -5464 1 1335 305 189 14 42 chrX 98431485 98431557 -68218739 + L1MEa LINE L1 828 897 -5197 1 1335 233 330 0 0 chrX 98431633 98431730 -68218566 + PB1D10 SINE Alu 1 97 -20 1 1335 244 314 0 0 chrX 98431653 98431739 -68218557 + ID_B1 SINE B4 102 187 -37 1 1335 570 269 93 0 chrX 98432328 98432521 -68217775 - L1MEf LINE L1 -4872 1328 1118 1 1335 266 292 41 14 chrX 98432547 98432620 -68217676 - ID4_ SINE ID 0 83 9 1 1335 247 261 0 28 chrX 98432666 98432737 -68217559 + GA-rich Low_complexity Low_complexity 3 71 0 1 1335 545 265 93 106 chrX 98432860 98433257 -68217039 + RMER10A LTR ERVL 23 414 -28 1 1335 358 350 6 84 chrX 98433981 98434159 -68216137 - L2b LINE L2 -189 3186 3023 1 1335 228 344 4 82 chrX 98434165 98434274 -68216022 - B1F SINE Alu -6 114 13 1 1335 363 96 83 12 chrX 98434282 98434366 -68215930 + Lx LINE L1 6561 6650 -4 1 1335 888 44 0 17 chrX 98434476 98434503 -68215793 - B1_Mus1 SINE Alu -17 131 19 1 1335 329 271 54 36 chrX 98434503 98434591 -68215705 - B4A SINE B4 -98 194 103 1 1335 522 0 0 0 chrX 98434591 98434649 -68215647 + (CCA)n Simple_repeat Simple_repeat 2 59 0 1 1335 329 271 54 36 chrX 98434649 98434671 -68215625 - B4A SINE B4 -190 102 82 1 1335 311 255 234 0 chrX 98434659 98434753 -68215543 - PB1D10 SINE Alu 0 117 2 1 1335 183 245 82 0 chrX 98434777 98434826 -68215470 + L2a LINE L2 3374 3426 0 1 166 368 264 111 19 chrX 98435037 98435145 -68215151 - PB1D7 SINE Alu -2 118 1 1 1336 276 159 23 0 chrX 98435320 98435364 -68214932 + RSINE1 SINE B4 84 128 -37 1 1336 363 44 0 0 chrX 98435364 98435409 -68214887 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1336 1458 84 6 0 chrX 98435443 98435622 -68214674 + B2_Mm2 SINE B2 2 181 -14 1 1336 643 281 69 58 chrX 98435904 98436093 -68214203 + B3A SINE B2 1 191 -7 1 1336 248 299 51 13 chrX 98436289 98436367 -68213929 + L4 LINE RTE 551 631 -1398 1 1336 461 311 76 0 chrX 98437408 98437540 -68212756 + ID_B1 SINE B4 82 223 -1 1 1336 462 114 0 0 chrX 98437607 98437677 -68212619 + (T)n Simple_repeat Simple_repeat 1 70 0 1 1336 1291 41 0 0 chrX 98437677 98437822 -68212474 - B1_Mm SINE Alu 0 147 3 1 1336 332 282 0 0 chrX 98437825 98437896 -68212400 - MER3 DNA MER1_type -138 71 1 1 1336 1190 57 29 0 chrX 98438506 98438646 -68211650 - B1_Mus2 SINE Alu -2 145 2 1 1336 526 315 108 72 chrX 98438654 98438986 -68211310 + MLT1A1 LTR MaLR 65 408 0 1 1336 2253 105 72 14 chrX 98439026 98439374 -68210922 - RLTR9A LTR ERVK 0 368 1 1 1336 1827 310 20 8 chrX 98439406 98440005 -68210291 - ETnERV-int LTR ERVK -2379 935 330 1 1336 2183 103 25 25 chrX 98440261 98440620 -68209676 - RLTR9A LTR ERVK -9 359 1 1 1336 22 35 0 0 chrX 98440933 98440962 -68209334 + AT_rich Low_complexity Low_complexity 1 29 0 1 1336 1560 55 0 6 chrX 98440968 98441150 -68209146 + B2_Mm2 SINE B2 1 181 -14 1 1336 369 0 0 0 chrX 98441268 98441309 -68208987 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1 1336 348 231 134 36 chrX 98441326 98441438 -68208858 - RSINE1 SINE B4 -40 125 3 1 1336 188 323 62 46 chrX 98441453 98441583 -68208713 + L4 LINE RTE 719 850 -1179 1 1336 1446 285 131 27 chrX 98441740 98442299 -68207997 + L4 LINE RTE 1097 1713 -316 1 1336 192 77 0 0 chrX 98442587 98442613 -68207683 + (TTCTCC)n Simple_repeat Simple_repeat 4 29 0 1 1336 297 176 0 0 chrX 98442884 98442958 -68207338 + (TTGG)n Simple_repeat Simple_repeat 2 75 0 1 1336 208 119 0 45 chrX 98442981 98443004 -68207292 + T-rich Low_complexity Low_complexity 20 42 0 1 1336 1330 34 0 0 chrX 98443004 98443150 -68207146 - B1_Mus1 SINE Alu 0 148 3 1 1336 208 119 0 45 chrX 98443150 98443170 -68207126 + T-rich Low_complexity Low_complexity 1 19 0 1 1336 424 195 73 0 chrX 98443170 98443252 -68207044 - B1_Mur2 SINE Alu 0 149 62 1 1336 800 203 162 11 chrX 98443253 98443432 -68206864 - B3 SINE B2 -9 207 2 1 1336 312 91 0 0 chrX 98443446 98443490 -68206806 + (TTG)n Simple_repeat Simple_repeat 2 45 0 1 1336 180 135 0 0 chrX 98443490 98443527 -68206769 + (T)n Simple_repeat Simple_repeat 1 37 0 1 1336 356 253 0 12 chrX 98443590 98443670 -68206626 + RSINE1 SINE B4 47 125 -40 1 1336 656 196 43 0 chrX 98443746 98443884 -68206412 - B1_Mur2 SINE Alu -1 148 5 1 1336 222 227 0 0 chrX 98444051 98444095 -68206201 - ID SINE ID -166 58 15 1 1336 634 229 7 34 chrX 98444193 98444342 -68205954 + ID_B1 SINE B4 80 224 0 1 1336 1017 236 14 5 chrX 98444364 98444573 -68205723 + B3 SINE B2 5 215 -1 1 1336 201 306 47 0 chrX 98444661 98444746 -68205550 + MIRb SINE MIR 178 266 -2 1 1336 186 259 17 33 chrX 98445049 98445109 -68205187 - MIR3 SINE MIR -139 69 11 1 1336 489 110 0 0 chrX 98445192 98445265 -68205031 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 1336 480 317 20 27 chrX 98445292 98445441 -68204855 - B1F2 SINE Alu -1 148 1 1 1336 305 256 42 76 chrX 98445519 98445663 -68204633 + L1MCa LINE L1 1825 1963 -4545 1 1336 573 246 0 0 chrX 98445688 98445806 -68204490 + PB1D9 SINE Alu 2 119 -1 1 1336 1304 69 0 0 chrX 98445811 98445971 -68204325 + B2_Mm1t SINE B2 1 160 -33 1 1336 225 0 0 0 chrX 98445971 98445996 -68204300 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 1 1336 279 0 0 0 chrX 98446446 98446477 -68203819 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1336 866 67 86 118 chrX 98446487 98446639 -68203657 - B1_Mus1 SINE Alu 0 148 2 1 1336 670 216 241 21 chrX 98446865 98447101 -68203195 + B4A SINE B4 1 288 -4 1 1336 226 219 52 52 chrX 98447389 98447466 -68202830 + RLTR12A LTR ERVK 127 203 -365 1 1336 221 309 18 0 chrX 98447487 98447542 -68202754 - L2c LINE L2 -78 3309 3254 1 1336 465 231 0 0 chrX 98447688 98447779 -68202517 + ID_B1 SINE B4 123 213 -11 1 1336 753 211 29 69 chrX 98447811 98448015 -68202281 + B3A SINE B2 3 198 0 1 1336 828 194 0 14 chrX 98448020 98448161 -68202135 + B1_Mur4 SINE Alu 4 142 -8 1 1336 329 267 9 54 chrX 98448412 98448523 -68201773 + MIRb SINE MIR 96 201 -67 1 1336 458 184 204 0 chrX 98448528 98448626 -68201670 + ORR1C2 LTR MaLR 1 118 -266 1 1336 583 175 0 10 chrX 98448762 98448866 -68201430 + BC1_Mm scRNA scRNA 1 103 -49 1 1336 261 288 29 20 chrX 98450734 98450850 -68199446 - L2b LINE L2 -5 3370 3262 1 1336 243 250 222 12 chrX 98451779 98451860 -68198436 - BC1_Mm scRNA scRNA -52 100 3 1 1336 241 213 0 0 chrX 98451915 98451962 -68198334 - MIR SINE MIR -116 146 100 1 1336 191 258 31 46 chrX 98452037 98452102 -68198194 + L2 LINE L2 9 72 -3347 1 1336 517 176 77 19 chrX 98453200 98453304 -68196992 - B1_Mur2 SINE Alu -19 130 21 1 1336 1412 84 5 5 chrX 98456954 98457146 -68193150 + B2_Mm1a SINE B2 1 192 -1 1 1336 234 289 22 67 chrX 98458055 98458144 -68192152 - PB1D10 SINE Alu 0 117 33 1 1336 1068 271 9 0 chrX 98458202 98458423 -68191873 - ID_B1 SINE B4 0 224 2 1 1336 491 243 30 10 chrX 98458432 98458556 -68191740 - PB1D10 SINE Alu -2 147 22 1 1336 730 197 7 7 chrX 98459820 98459963 -68190333 + B1F SINE Alu 2 144 -5 1 1336 321 252 96 35 chrX 98461114 98461229 -68189067 - MIRb SINE MIR -32 236 115 1 1336 354 98 0 0 chrX 98461784 98461835 -68188461 + (T)n Simple_repeat Simple_repeat 1 51 0 1 1336 1248 54 0 0 chrX 98461835 98461983 -68188313 - B1_Mus1 SINE Alu 0 148 1 1 1336 209 344 103 56 chrX 98464061 98464381 -68185915 + L2 LINE L2 2461 2795 -624 1 1336 249 336 118 15 chrX 98464430 98464566 -68185730 - L2b LINE L2 -2 3373 3224 1 1336 608 240 46 8 chrX 98464820 98464950 -68185346 - ID_B1 SINE B4 -10 214 80 1 1336 300 167 0 122 chrX 98464959 98465041 -68185255 + L1MC1 LINE L1 6137 6208 -125 1 1336 226 209 0 0 chrX 98465062 98465105 -68185191 - L1MC1 LINE L1 -21 6312 6270 1 1336 432 303 30 13 chrX 98465152 98465264 -68185032 - ID_B1 SINE B4 -40 184 78 1 1336 226 235 122 47 chrX 98465549 98465656 -68184640 - PB1D10 SINE Alu 0 117 3 1 1336 539 214 38 19 chrX 98465686 98465791 -68184505 - RSINE1 SINE B4 -58 107 1 1 1336 392 172 424 0 chrX 98465933 98466032 -68184264 + B1_Mur4 SINE Alu 2 142 -8 1 1336 540 45 0 0 chrX 98466033 98466100 -68184196 + (GAAA)n Simple_repeat Simple_repeat 3 69 0 1 1336 673 140 52 6 chrX 98466100 98466272 -68184024 + GA-rich Low_complexity Low_complexity 1 180 0 1 1336 252 0 0 0 chrX 98466272 98466300 -68183996 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 1 1336 1193 61 0 20 chrX 98466324 98466474 -68183822 + B1_Mus1 SINE Alu 2 148 0 1 1336 421 228 0 109 chrX 98466484 98466612 -68183684 + PB1D9 SINE Alu 6 119 -1 1 1336 29 70 0 0 chrX 98466737 98466794 -68183502 + AT_rich Low_complexity Low_complexity 1 57 0 1 1336 198 0 0 0 chrX 98466836 98466858 -68183438 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1 1336 1200 50 0 0 chrX 98466858 98466997 -68183299 - B1_Mus1 SINE Alu -8 140 2 1 1336 898 280 0 0 chrX 98466998 98467184 -68183112 - B3 SINE B2 -30 186 1 1 1336 284 0 0 27 chrX 98467204 98467241 -68183055 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1 1336 849 208 0 0 chrX 98467242 98467386 -68182910 - B1_Mur4 SINE Alu -6 144 1 1 1336 953 249 0 5 chrX 98467387 98467601 -68182695 - B3 SINE B2 -3 213 1 1 1336 400 266 18 0 chrX 98467621 98467730 -68182566 - PB1D9 SINE Alu -6 114 4 1 1336 362 296 87 43 chrX 98467760 98467898 -68182398 - RSINE1 SINE B4 -2 163 20 1 1336 449 245 0 54 chrX 98468057 98468169 -68182127 + B1_Mur1 SINE Alu 38 143 -6 1 1336 195 42 0 0 chrX 98468172 98468196 -68182100 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 1336 280 286 39 13 chrX 98468196 98468274 -68182022 - PB1D10 SINE Alu -26 91 12 1 1336 614 136 0 43 chrX 98468379 98468494 -68181802 - BC1_Mm scRNA scRNA -42 110 1 1 1336 687 204 49 7 chrX 98468500 98468643 -68181653 - B1_Mur2 SINE Alu 0 149 1 1 1336 633 189 82 52 chrX 98468672 98468806 -68181490 - B1_Mur2 SINE Alu -2 147 10 1 1336 304 100 100 0 chrX 98468930 98468980 -68181316 - PB1D9 SINE Alu -52 68 14 1 1336 261 294 64 21 chrX 98468980 98469014 -68181282 - B4 SINE B4 -129 143 66 1 1336 230 300 150 0 chrX 98469038 98469138 -68181158 - MIR SINE MIR -74 188 74 1 1336 247 317 0 40 chrX 98469444 98469569 -68180727 + C-rich Low_complexity Low_complexity 6 125 0 1 1336 270 0 0 0 chrX 98470110 98470140 -68180156 + (TCC)n Simple_repeat Simple_repeat 1 30 0 1 1336 211 333 161 53 chrX 98471123 98471408 -68178888 - L2c LINE L2 -24 3363 3048 1 1336 481 271 0 45 chrX 98472471 98472583 -68177713 + PB1D10 SINE Alu 3 109 -8 1 1336 525 225 138 8 chrX 98472974 98473104 -68177192 - B1F2 SINE Alu 0 149 3 1 1336 23 33 0 0 chrX 98473127 98473157 -68177139 + AT_rich Low_complexity Low_complexity 1 30 0 1 1336 329 238 65 56 chrX 98474041 98474148 -68176148 + PB1D9 SINE Alu 13 120 0 1 1336 618 200 62 0 chrX 98474158 98474288 -68176008 + B1F1 SINE Alu 6 143 -6 1 1336 734 222 0 27 chrX 98474306 98474454 -68175842 + B1_Mur1 SINE Alu 5 148 -1 1 1336 582 15 0 0 chrX 98475103 98475170 -68175126 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 1 1336 1107 96 0 0 chrX 98475184 98475330 -68174966 - B1_Mus2 SINE Alu 0 147 2 1 1336 351 0 0 0 chrX 98475359 98475398 -68174898 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1336 1133 80 0 0 chrX 98475398 98475536 -68174760 - B1_Mus1 SINE Alu -10 138 1 1 1336 891 203 72 31 chrX 98475558 98475751 -68174545 - B3 SINE B2 -15 201 1 1 1336 316 275 91 58 chrX 98476242 98476385 -68173911 - MIRc SINE MIR -27 241 88 1 1336 193 140 19 57 chrX 98477591 98477644 -68172652 + C-rich Low_complexity Low_complexity 2 52 0 1 1336 240 35 0 0 chrX 98480762 98480791 -68169505 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 1 1336 535 277 93 33 chrX 98482206 98482389 -68167907 - MIRb SINE MIR -29 239 46 1 1336 232 349 95 50 chrX 98482437 98482796 -68167500 + L3 LINE CR1 4075 4453 -55 1 1336 846 161 14 27 chrX 98483981 98484128 -68166168 + B1_Mur1 SINE Alu 5 149 0 1 1336 424 301 111 7 chrX 98484212 98484356 -68165940 + RSINE1 SINE B4 7 165 0 1 1336 579 260 0 0 chrX 98486000 98486123 -68164173 - B1F SINE Alu -1 148 26 1 1336 377 270 10 39 chrX 98486148 98486252 -68164044 - PB1D10 SINE Alu -16 101 1 1 1336 1161 91 18 0 chrX 98486259 98486424 -68163872 - B2_Mm2 SINE B2 -4 191 24 1 1336 512 151 12 0 chrX 98487158 98487244 -68163052 - B3A SINE B2 -108 90 4 1 1336 244 187 67 0 chrX 98487470 98487545 -68162751 + CT-rich Low_complexity Low_complexity 1 80 0 1 1336 1004 231 9 39 chrX 98489802 98490032 -68160264 + ID_B1 SINE B4 2 224 0 1 1336 184 234 153 47 chrX 98490465 98490550 -68159746 - L2b LINE L2 -291 3084 2991 1 1336 464 260 39 13 chrX 98491264 98491420 -68158876 + HAL1-2a_MD LINE L1 2335 2494 -530 1 1336 585 228 0 3 chrX 98491570 98491680 -68158616 - PB1D7 SINE Alu -1 119 10 1 1336 364 265 208 51 chrX 98491680 98491702 -68158594 - ID_B1 SINE B4 -56 194 71 1 1336 660 115 0 0 chrX 98491929 98492033 -68158263 + (CAG)n Simple_repeat Simple_repeat 2 105 0 1 1336 228 67 0 0 chrX 98492042 98492072 -68158224 + (CCCCAG)n Simple_repeat Simple_repeat 1 30 0 1 1336 480 18 0 0 chrX 98494335 98494392 -68155904 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 1336 262 242 21 21 chrX 98495589 98495682 -68154614 + C-rich Low_complexity Low_complexity 3 95 0 1 1336 344 172 0 11 chrX 98495797 98495885 -68154411 + CT-rich Low_complexity Low_complexity 2 88 0 1 1336 252 0 0 0 chrX 98495887 98495915 -68154381 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1336 183 156 0 0 chrX 98496055 98496087 -68154209 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1336 180 111 0 0 chrX 98498488 98498515 -68151781 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 1 1336 546 310 82 20 chrX 98499077 98499321 -68150975 - MIRc SINE MIR -1 267 9 1 1336 183 321 35 47 chrX 98499515 98499600 -68150696 + MER5A DNA MER1_type 92 175 -14 1 1336 322 183 0 53 chrX 98499841 98499916 -68150380 - B1F SINE Alu 0 149 79 1 1336 567 0 0 0 chrX 98500470 98500533 -68149763 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 1336 228 225 24 36 chrX 98501250 98501333 -68148963 + CT-rich Low_complexity Low_complexity 1 82 0 2 1336 937 234 68 48 chrX 98501342 98501593 -68148703 + MIRb SINE MIR 3 258 -10 3 1336 523 201 14 0 chrX 98501601 98501745 -68148551 + CT-rich Low_complexity Low_complexity 1 146 0 4 1336 435 269 0 19 chrX 98504444 98504550 -68145746 - PB1D10 SINE Alu -5 112 9 5 1336 260 268 92 58 chrX 98504475 98504562 -68145734 - B4A SINE B4 -118 174 85 6 1336 727 232 0 14 chrX 98506088 98506232 -68144064 + B1_Mur1 SINE Alu 2 143 -6 7 1336 866 172 14 0 chrX 98506985 98507130 -68143166 - B1_Mur4 SINE Alu -1 149 3 8 1336 353 250 10 39 chrX 98507138 98507235 -68143061 - Charlie4z DNA MER1_type -6 161 68 9 1336 405 248 28 19 chrX 98507235 98507342 -68142954 - PB1D10 SINE Alu -8 109 2 1 1336 302 231 42 85 chrX 98507342 98507362 -68142934 - Charlie24 DNA MER1_type -97 2353 2332 9 1336 228 135 0 0 chrX 98507738 98507775 -68142521 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 1336 237 159 0 0 chrX 98508652 98508696 -68141600 + CT-rich Low_complexity Low_complexity 2 45 0 1 1336 568 157 8 50 chrX 98509625 98509746 -68140550 - MER5A DNA MER1_type 0 189 74 1 1336 663 267 34 11 chrX 98509926 98510104 -68140192 - MIRb SINE MIR -72 196 15 1 1336 743 59 10 0 chrX 98510691 98510792 -68139504 + (TTTC)n Simple_repeat Simple_repeat 3 104 0 1 1336 798 114 13 120 chrX 98510793 98510943 -68139353 - B1_Mur4 SINE Alu -12 138 5 1 1336 545 231 8 0 chrX 98511862 98511979 -68138317 + PB1D7 SINE Alu 1 118 -2 1 1336 432 0 0 0 chrX 98512027 98512075 -68138221 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1336 194 240 0 20 chrX 98512716 98512767 -68137529 + L2 LINE L2 3012 3061 -358 1 1336 204 40 0 0 chrX 98513034 98513059 -68137237 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 1336 201 226 0 0 chrX 98515649 98515702 -68134594 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1336 210 160 0 0 chrX 98516531 98516581 -68133715 + T-rich Low_complexity Low_complexity 1 50 0 2 1336 212 220 0 39 chrX 98516971 98517023 -68133273 + (CCA)n Simple_repeat Simple_repeat 2 51 0 2 1336 272 368 78 31 chrX 98517228 98517486 -68132810 + L3 LINE CR1 3476 3745 -744 2 1336 450 141 0 93 chrX 98517800 98517886 -68132410 + ID_B1 SINE B4 125 202 -22 2 1336 366 23 0 0 chrX 98517888 98517931 -68132365 + (TC)n Simple_repeat Simple_repeat 2 44 0 2 1336 444 37 0 0 chrX 98517931 98517984 -68132312 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1336 568 223 24 40 chrX 98517997 98518123 -68132173 - B3A SINE B2 -74 124 1 2 1336 869 209 0 0 chrX 98518340 98518488 -68131808 - B1_Mur1 SINE Alu 0 149 2 2 1336 448 269 50 94 chrX 98518494 98518537 -68131759 - B2_Mm2 SINE B2 -3 192 158 3 1336 1167 198 14 9 chrX 98518537 98518751 -68131545 - B3 SINE B2 0 216 2 3 1336 684 249 9 18 chrX 98518751 98518908 -68131388 - B3A SINE B2 -38 157 1 3 1336 751 167 97 15 chrX 98518912 98518923 -68131373 - B1_Mur2 SINE Alu -2 147 138 3 1336 492 18 0 0 chrX 98518923 98518980 -68131316 + (TTTTG)n Simple_repeat Simple_repeat 3 59 0 3 1336 751 167 97 15 chrX 98518980 98519102 -68131194 - B1_Mur2 SINE Alu -12 137 3 3 1336 240 404 28 28 chrX 98520514 98520659 -68129637 + L3 LINE CR1 3910 4054 -435 2 1336 415 233 0 8 chrX 98520756 98520850 -68129446 - B1_Mur1 SINE Alu 0 149 31 3 1336 825 280 23 14 chrX 98521021 98521242 -68129054 - ID_B1 SINE B4 0 224 2 3 1336 231 36 0 0 chrX 98521354 98521382 -68128914 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1336 414 53 0 0 chrX 98522416 98522473 -68127823 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1336 242 180 141 47 chrX 98522473 98522537 -68127759 - ID4_ SINE ID -11 72 3 3 1336 387 180 97 43 chrX 98522571 98522664 -68127632 + B3A SINE B2 1 98 -100 3 1336 567 269 158 21 chrX 98522718 98522908 -68127388 + B3 SINE B2 1 216 0 4 1336 1644 32 0 0 chrX 98522915 98523103 -68127193 + B2_Mm1t SINE B2 2 189 -4 4 1336 517 200 31 10 chrX 98523135 98523231 -68127065 + B1F SINE Alu 1 98 -51 4 1336 228 180 32 32 chrX 98523175 98523238 -68127058 + RLTR25B LTR ERVK 441 503 -525 4 1336 848 229 112 0 chrX 98523477 98523691 -68126605 + MIRc SINE MIR 16 253 -15 4 1336 22 0 0 0 chrX 98523737 98523759 -68126537 + AT_rich Low_complexity Low_complexity 1 22 0 4 1336 491 243 92 22 chrX 98523886 98524028 -68126268 + PB1D10 SINE Alu 3 144 -5 4 1336 526 170 129 10 chrX 98524460 98524561 -68125735 - B3 SINE B2 -103 113 1 4 1336 1428 143 20 12 chrX 98524632 98524740 -68125556 - Lx3C LINE L1 0 6976 6865 4 1336 207 0 0 0 chrX 98524740 98524763 -68125533 + (CCCCCA)n Simple_repeat Simple_repeat 4 26 0 4 1336 1428 143 20 12 chrX 98524763 98524908 -68125388 - Lx3C LINE L1 -112 6864 6721 4 1336 216 356 0 65 chrX 98525696 98525804 -68124492 + ID_B1 SINE B4 79 179 -45 5 1336 436 248 0 37 chrX 98525717 98525826 -68124470 + PB1D10 SINE Alu 13 117 0 5 1336 493 302 45 82 chrX 98526057 98526083 -68124213 + CYRA11_Mm Unknown Y-chromosome 151 384 -231 5 1336 1373 162 23 5 chrX 98526083 98526300 -68123996 - URR1B DNA MER1_type -2 223 3 5 1336 718 187 28 28 chrX 98526556 98526699 -68123597 + B1_Mur3 SINE Alu 1 143 -6 5 1336 808 108 22 51 chrX 98526705 98526842 -68123454 - B1_Mus1 SINE Alu 0 148 16 5 1336 681 213 29 0 chrX 98526872 98527008 -68123288 - B1_Mur2 SINE Alu -8 141 2 5 1336 1168 68 0 0 chrX 98527265 98527412 -68122884 + B1_Mus2 SINE Alu 1 147 0 5 1336 35 54 0 0 chrX 98528146 98528202 -68122094 + GC_rich Low_complexity Low_complexity 1 56 0 5 1336 588 137 0 0 chrX 98528205 98528307 -68121989 + (TG)n Simple_repeat Simple_repeat 2 103 0 5 1336 601 273 0 45 chrX 98529797 98529817 -68120479 - RSINE1 SINE B4 0 165 150 6 1336 207 100 0 0 chrX 98529817 98529847 -68120449 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1336 601 273 0 45 chrX 98529847 98529983 -68120313 - RSINE1 SINE B4 -16 149 16 6 1336 285 214 0 125 chrX 98530047 98530064 -68120232 + MT2B LTR ERVL 152 158 -443 6 1336 498 90 0 0 chrX 98530064 98530131 -68120165 + B1_Mur3 SINE Alu 2 68 -81 6 1336 498 186 23 0 chrX 98530126 98530212 -68120084 + B3 SINE B2 119 206 -10 6 1336 545 286 111 0 chrX 98530226 98530415 -68119881 + B3 SINE B2 1 210 -6 6 1336 1044 132 16 32 chrX 98530421 98530609 -68119687 - B2_Mm2 SINE B2 -9 186 2 6 1336 207 0 0 0 chrX 98530613 98530636 -68119660 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 6 1336 1203 35 0 21 chrX 98530638 98530782 -68119514 - B1_Mm SINE Alu -6 141 1 6 1336 263 316 168 7 chrX 98531019 98531156 -68119140 + Tigger5 DNA MER2_type 9 167 -2239 6 1336 337 250 23 35 chrX 98531733 98531820 -68118476 + Tigger5 DNA MER2_type 2282 2367 -39 6 1336 248 313 60 0 chrX 98531809 98531892 -68118404 - ID_B1 SINE B4 -62 162 75 7 1336 508 171 12 0 chrX 98531910 98531992 -68118304 + ID4 SINE ID 1 83 0 7 1336 468 162 36 116 chrX 98532031 98532143 -68118153 - B1_Mur4 SINE Alu -1 149 47 7 1336 895 155 7 0 chrX 98532175 98532317 -68117979 - B1_Mur3 SINE Alu -6 143 1 7 1336 1205 61 0 0 chrX 98532346 98532493 -68117803 + B1_Mus2 SINE Alu 1 147 0 7 1336 480 260 65 8 chrX 98532511 98532635 -68117661 - B3A SINE B2 -1 197 67 7 1336 342 292 9 54 chrX 98532642 98532754 -68117542 - MIR3 SINE MIR -49 159 53 7 1336 2475 50 76 0 chrX 98532781 98533084 -68117212 + ORR1A2 LTR MaLR 2 327 0 7 1336 267 256 13 13 chrX 98533762 98533846 -68116450 + PB1D10 SINE Alu 39 122 -5 7 1336 517 223 9 28 chrX 98533854 98533960 -68116336 + RSINE1 SINE B4 4 107 -58 7 1336 531 0 0 0 chrX 98533968 98534027 -68116269 + (TC)n Simple_repeat Simple_repeat 1 59 0 8 1336 186 43 0 0 chrX 98534027 98534049 -68116247 + (CA)n Simple_repeat Simple_repeat 1 23 0 8 1336 533 236 154 24 chrX 98534073 98534242 -68116054 + B3A SINE B2 8 198 0 8 1336 862 261 20 45 chrX 98534696 98534897 -68115399 + B3 SINE B2 7 202 -14 8 1336 1239 35 7 0 chrX 98535320 98535464 -68114832 - B1_Mm SINE Alu -2 145 1 8 1336 332 260 0 64 chrX 98535651 98535729 -68114567 + ID4_ SINE ID 11 83 0 8 1336 253 304 66 74 chrX 98535911 98535970 -68114326 + B4A SINE B4 29 86 -206 8 1336 310 197 38 8 chrX 98535970 98536059 -68114237 + B1_Mur4 SINE Alu 1 90 -57 8 1336 498 186 12 0 chrX 98536198 98536284 -68114012 + B1_Mur3 SINE Alu 62 148 -1 8 1336 639 195 0 123 chrX 98536341 98536487 -68113809 - B1_Mur1 SINE Alu -18 131 4 8 1336 765 104 70 0 chrX 98536526 98536641 -68113655 + B1_Mur4 SINE Alu 20 142 -8 9 1336 827 212 22 32 chrX 98536654 98536839 -68113457 - B3A SINE B2 0 198 16 9 1336 3000 155 53 23 chrX 98536839 98537408 -68112888 + Lx9 LINE L1 7059 7644 0 9 1336 627 174 9 9 chrX 98537429 98537539 -68112757 + PB1D9 SINE Alu 11 120 0 9 1336 345 282 16 157 chrX 98537539 98537610 -68112686 + MT2B LTR ERVL 175 329 -272 9 1336 273 269 179 0 chrX 98537613 98537691 -68112605 - B1F SINE Alu -57 92 1 9 1336 366 23 0 0 chrX 98538015 98538058 -68112238 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 9 1336 2589 126 27 22 chrX 98538123 98538528 -68111768 - MTB_Mm LTR MaLR 0 407 1 9 1336 4260 156 74 183 chrX 98538528 98539446 -68110850 - MTB_Mm-int LTR MaLR 0 1258 506 9 1336 6458 63 8 7 chrX 98539446 98540274 -68110022 - Lx3_Mus LINE L1 -8 7001 6173 9 1336 4260 156 74 183 chrX 98540274 98540605 -68109691 - MTB_Mm-int LTR MaLR -753 505 145 9 1336 1189 54 0 7 chrX 98540606 98540755 -68109541 - B1_Mus1 SINE Alu 0 148 1 9 1336 1066 84 162 0 chrX 98540761 98540928 -68109368 - B2_Mm2 SINE B2 -1 194 1 1 1336 242 218 36 0 chrX 98541013 98541068 -68109228 + B1_Mur2 SINE Alu 91 147 -2 1 1336 412 306 0 26 chrX 98541091 98541205 -68109091 + PB1D9 SINE Alu 10 120 0 1 1336 709 243 99 0 chrX 98541324 98541476 -68108820 + B3A SINE B2 2 168 -30 1 1336 231 103 0 0 chrX 98541477 98541516 -68108780 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1336 612 250 83 0 chrX 98541531 98541663 -68108633 + B1_Mur1 SINE Alu 2 144 -5 1 1336 293 278 36 36 chrX 98542052 98542164 -68108132 - MIR3 SINE MIR -12 196 85 1 1336 247 289 0 0 chrX 98542511 98542563 -68107733 + ID4_ SINE ID 2 53 -30 1 1336 220 365 64 70 chrX 98542563 98542667 -68107629 + ID_B1 SINE B4 2 156 -68 1 1336 250 229 0 0 chrX 98542627 98542675 -68107621 + PB1D10 SINE Alu 36 83 -34 1 1336 1059 231 4 65 chrX 98543384 98543536 -68106760 + ID_B1 SINE B4 8 157 -67 1 1336 1423 85 16 0 chrX 98543536 98543725 -68106571 + B2_Mm1a SINE B2 2 193 0 1 1336 1059 231 4 65 chrX 98543725 98543803 -68106493 + ID_B1 SINE B4 158 224 0 1 1336 21 0 0 0 chrX 98543803 98543824 -68106472 + AT_rich Low_complexity Low_complexity 1 21 0 1 1336 1199 42 0 20 chrX 98543860 98544007 -68106289 - B1_Mus1 SINE Alu 0 148 5 1 1336 298 302 133 20 chrX 98544008 98544106 -68106190 + B1_Mur1 SINE Alu 13 121 -28 1 1336 245 233 93 0 chrX 98544130 98544216 -68106080 + B3 SINE B2 113 206 -10 1 1336 863 191 22 17 chrX 98544241 98544422 -68105874 + B3A SINE B2 1 182 -16 1 1336 225 154 0 0 chrX 98544425 98544464 -68105832 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1336 811 176 0 33 chrX 98544516 98544669 -68105627 + B1_Mur4 SINE Alu 1 148 -2 1 1336 250 95 95 0 chrX 98544709 98544751 -68105545 + B4 SINE B4 24 69 -223 1 1336 387 0 0 0 chrX 98544810 98544853 -68105443 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 1 1336 3220 31 21 0 chrX 98544879 98545260 -68105036 - L1Md_F3 LINE L1 0 6584 6196 1 1336 276 244 0 34 chrX 98545287 98545376 -68104920 + Lx8 LINE L1 7386 7471 -2 1 1336 243 0 0 0 chrX 98545392 98545419 -68104877 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1336 313 275 33 0 chrX 98545423 98545514 -68104782 + B4 SINE B4 85 178 -114 1 1336 267 279 58 14 chrX 98545515 98545584 -68104712 + B3A SINE B2 86 157 -41 1 1336 306 0 0 0 chrX 98545590 98545624 -68104672 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1336 21 0 0 0 chrX 98545631 98545652 -68104644 + AT_rich Low_complexity Low_complexity 1 21 0 1 1336 751 209 7 39 chrX 98545682 98545836 -68104460 + B1_Mur4 SINE Alu 1 149 -1 1 1336 826 179 0 0 chrX 98545884 98546024 -68104272 + B1_Mus1 SINE Alu 1 140 -8 1 1336 468 0 0 0 chrX 98546036 98546088 -68104208 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 1336 620 186 0 26 chrX 98546089 98546205 -68104091 + PB1D9 SINE Alu 3 115 -5 1 1336 245 259 35 58 chrX 98546497 98546583 -68103713 + MIRm SINE MIR 193 276 0 1 1336 682 43 21 0 chrX 98546801 98546895 -68103401 + (TTC)n Simple_repeat Simple_repeat 2 97 0 1 1336 637 137 9 29 chrX 98547469 98547574 -68102722 + MTD LTR MaLR 186 288 -131 1 1336 361 274 24 64 chrX 98547977 98548102 -68102194 + PB1D7 SINE Alu 1 120 0 1 1336 225 255 59 0 chrX 98548156 98548207 -68102089 - PB1D10 SINE Alu -15 102 49 1 1336 390 240 0 13 chrX 98548294 98548370 -68101926 + B1_Mur1 SINE Alu 34 108 -41 1 1336 300 312 91 65 chrX 98548399 98548553 -68101743 + HAL1-3A_ME LINE L1 2285 2442 -416 1 1336 961 53 107 0 chrX 98548575 98548706 -68101590 + B1_Mm SINE Alu 1 145 -2 1 1336 2221 126 112 8 chrX 98548729 98549096 -68101200 + MTC LTR MaLR 9 413 -8 1 1336 1160 55 0 46 chrX 98549136 98549289 -68101007 + B1_Mm SINE Alu 2 147 0 1 1336 225 0 0 0 chrX 98549289 98549314 -68100982 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1336 2612 129 8 5 chrX 98549403 98549556 -68100740 + ORR1B1 LTR MaLR 4 157 -237 1 1336 444 37 0 0 chrX 98549556 98549610 -68100686 + (CATA)n Simple_repeat Simple_repeat 2 55 0 1 1336 2612 129 8 5 chrX 98549610 98549846 -68100450 + ORR1B1 LTR MaLR 158 394 0 1 1336 337 246 14 0 chrX 98550011 98550080 -68100216 + ID4_ SINE ID 3 72 -11 1 1336 840 177 100 12 chrX 98550157 98550317 -68099979 - MTE2b LTR MaLR -2 377 204 1 1336 997 98 159 0 chrX 98550319 98550482 -68099814 + B2_Mm2 SINE B2 2 190 -5 1 1336 3252 48 2 5 chrX 98550482 98550908 -68099388 + L1Md_F2 LINE L1 6169 6582 0 1 1336 564 15 0 0 chrX 98550962 98551027 -68099269 + (GAAA)n Simple_repeat Simple_repeat 2 66 0 1 1336 362 288 68 37 chrX 98551029 98551220 -68099076 + Lx8 LINE L1 7080 7276 -197 1 1336 422 248 83 0 chrX 98551373 98551506 -68098790 + L1M2 LINE L1 4408 4551 -1592 1 1336 521 205 26 18 chrX 98551528 98551642 -68098654 + PB1D9 SINE Alu 6 120 0 1 1336 237 229 170 40 chrX 98551642 98551742 -68098554 + Lx8 LINE L1 7359 7471 -2 1 1336 624 270 46 0 chrX 98551781 98551933 -68098363 + RSINE1 SINE B4 3 161 -4 1 1336 1341 90 27 0 chrX 98551968 98552156 -68098140 + B2_Mm1a SINE B2 1 193 0 1 1336 1051 83 0 8 chrX 98552166 98552299 -68097997 + B1_Mus2 SINE Alu 2 133 -14 1 1336 210 37 0 0 chrX 98552302 98552329 -68097967 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1336 344 248 78 26 chrX 98552416 98552532 -68097764 + L1M5 LINE L1 4389 4510 -1636 1 1336 666 292 90 20 chrX 98552532 98552756 -68097540 - MTE2b LTR MaLR -139 240 1 1 1336 605 246 35 14 chrX 98552922 98553066 -68097230 - B1_Mur1 SINE Alu -2 147 1 1 1336 251 324 0 0 chrX 98553005 98553073 -68097223 - B4 SINE B4 -146 146 79 1 1336 282 297 0 0 chrX 98553145 98553209 -68097087 + ID_B1 SINE B4 161 224 0 1 1336 593 238 46 39 chrX 98553298 98553451 -68096845 - RSINE1 SINE B4 -10 155 2 1 1336 403 291 45 168 chrX 98553465 98553709 -68096587 - ID_B1 SINE B4 -8 216 3 1 1336 216 0 0 0 chrX 98553770 98553794 -68096502 + (CAG)n Simple_repeat Simple_repeat 2 25 0 1 1336 369 0 0 0 chrX 98554025 98554066 -68096230 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1336 747 117 0 0 chrX 98554066 98554169 -68096127 - B1_Mus1 SINE Alu -10 138 36 1 1336 321 26 0 0 chrX 98554193 98554231 -68096065 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1336 243 294 20 0 chrX 98554242 98554293 -68096003 - B4A SINE B4 -79 213 162 1 1336 666 213 166 21 chrX 98554323 98554510 -68095786 + B3 SINE B2 3 216 0 1 1336 212 0 0 108 chrX 98554515 98554526 -68095770 + (T)n Simple_repeat Simple_repeat 1 11 0 1 1336 1239 48 0 0 chrX 98554526 98554672 -68095624 - B1_Mm SINE Alu 0 147 2 1 1336 212 0 0 108 chrX 98554672 98554697 -68095599 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1336 3986 97 20 29 chrX 98555276 98556343 -68093953 + RLTR13D1 LTR ERVK 1 773 -33 1 1336 363 282 0 0 chrX 98556384 98556455 -68093841 - RSINE1 SINE B4 -39 126 56 1 1336 351 0 0 0 chrX 98556503 98556542 -68093754 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 1336 1166 70 0 0 chrX 98556553 98556696 -68093600 - B1_Mus1 SINE Alu -1 147 5 1 1336 622 227 94 0 chrX 98556733 98556861 -68093435 - B1_Mur1 SINE Alu -8 141 2 1 1336 358 245 89 30 chrX 98556903 98557004 -68093292 + PB1 SINE Alu 21 127 0 1 1336 1091 44 7 0 chrX 98557016 98557151 -68093145 + B1_Mm SINE Alu 12 147 0 1 1336 201 74 0 0 chrX 98557158 98557185 -68093111 + (GGAA)n Simple_repeat Simple_repeat 3 29 0 1 1336 416 274 41 0 chrX 98557185 98557331 -68092965 + L1MA6 LINE L1 6135 6286 -14 1 1336 551 202 0 8 chrX 98557733 98557858 -68092438 + GA-rich Low_complexity Low_complexity 3 126 0 1 1336 512 86 0 24 chrX 98557982 98558065 -68092231 + L1Md_F2 LINE L1 6502 6582 0 1 1336 709 239 7 0 chrX 98558075 98558217 -68092079 + ID_B1 SINE B4 81 223 -1 1 1336 506 306 42 32 chrX 98558252 98558441 -68091855 + B3A SINE B2 1 191 -7 1 1336 226 246 27 68 chrX 98558493 98558567 -68091729 + RLTR25B LTR ERVK 428 498 -530 1 1336 594 152 9 45 chrX 98558501 98558611 -68091685 + B1_Mur3 SINE Alu 36 141 -8 1 1336 324 206 8 137 chrX 98558611 98558625 -68091671 + ID_B1 SINE B4 117 224 0 1 1336 831 229 71 28 chrX 98558631 98558842 -68091454 + ID_B1 SINE B4 2 221 -3 1 1336 262 231 0 37 chrX 98558950 98559004 -68091292 + ID4_ SINE ID 18 69 -14 1 1336 438 342 0 95 chrX 98558957 98559125 -68091171 + ID_B1 SINE B4 24 175 -49 1 1336 1140 111 0 0 chrX 98559150 98559321 -68090975 + (GAA)n Simple_repeat Simple_repeat 1 171 0 1 1336 296 373 8 45 chrX 98559326 98559366 -68090930 + ID SINE ID 49 83 -141 1 1336 445 311 10 10 chrX 98559366 98559470 -68090826 + PB1D10 SINE Alu 3 106 -11 1 1336 432 158 110 50 chrX 98559636 98559736 -68090560 + PB1D10 SINE Alu 12 117 0 1 1336 2382 163 5 3 chrX 98559794 98560175 -68090121 - MTC LTR MaLR 0 421 40 1 1336 301 158 18 0 chrX 98560180 98560237 -68090059 + B3 SINE B2 154 211 -5 1 1336 1055 205 0 0 chrX 98560261 98560451 -68089845 + B3 SINE B2 27 216 0 1 1336 5447 112 26 53 chrX 98560474 98561334 -68088962 - Lx4A LINE L1 0 7058 6223 1 1336 545 227 98 30 chrX 98561340 98561472 -68088824 - B1_Mur1 SINE Alu -7 142 2 1 1336 32 0 0 0 chrX 98561473 98561505 -68088791 + AT_rich Low_complexity Low_complexity 1 32 0 2 1336 675 273 114 13 chrX 98561505 98561694 -68088602 + B3A SINE B2 9 198 0 2 1336 677 288 23 9 chrX 98561710 98561924 -68088372 + ID_B1 SINE B4 2 218 -6 2 1336 471 202 0 0 chrX 98561925 98562044 -68088252 + T-rich Low_complexity Low_complexity 1 119 0 2 1336 1134 49 0 7 chrX 98562045 98562189 -68088107 - B1_Mus1 SINE Alu 0 148 6 2 1336 236 279 43 129 chrX 98562050 98562260 -68088036 + YREP_Mm Unknown Unknown 182 373 -1439 2 1336 436 295 41 41 chrX 98562211 98562356 -68087940 + ID_B1 SINE B4 78 222 -2 2 1336 945 221 15 5 chrX 98562367 98562572 -68087724 + B3 SINE B2 5 211 -5 2 1336 1660 16 5 0 chrX 98562589 98562773 -68087523 + B2_Mm1t SINE B2 1 185 -8 2 1336 1351 103 0 30 chrX 98562808 98563008 -68087288 + B2_Mm2 SINE B2 2 195 0 2 1336 619 288 12 12 chrX 98563194 98563356 -68086940 + RSINE1 SINE B4 4 165 0 2 1336 1088 62 7 14 chrX 98563526 98563673 -68086623 + B1_Mus1 SINE Alu 3 148 0 2 1336 327 65 0 0 chrX 98563676 98563722 -68086574 + (A)n Simple_repeat Simple_repeat 1 46 0 2 1336 681 171 111 0 chrX 98563726 98563843 -68086453 + B3 SINE B2 1 130 -86 2 1336 28 0 0 0 chrX 98563853 98563881 -68086415 + AT_rich Low_complexity Low_complexity 1 28 0 2 1336 310 274 14 0 chrX 98563901 98563974 -68086322 + ID4_ SINE ID 1 74 -9 2 1336 247 210 0 16 chrX 98564337 98564400 -68085896 + A-rich Low_complexity Low_complexity 3 64 0 2 1336 371 253 13 0 chrX 98565134 98565209 -68085087 + PB1D10 SINE Alu 5 80 -37 2 1336 678 274 0 63 chrX 98565189 98565364 -68084932 + ID_B1 SINE B4 54 217 -7 2 1336 298 248 176 121 chrX 98565226 98565391 -68084905 + FAM SINE Alu 137 310 -1 2 1336 1150 88 0 0 chrX 98565392 98565540 -68084756 + B1_Mus1 SINE Alu 1 148 0 2 1337 1067 183 19 47 chrX 98566252 98566464 -68083832 - B3 SINE B2 -10 206 1 2 1337 449 279 120 14 chrX 98567038 98567180 -68083116 - RSINE1 SINE B4 -7 158 2 2 1337 319 324 73 51 chrX 98567691 98567964 -68082332 + ORR1E LTR MaLR 81 359 0 2 1337 318 132 0 0 chrX 98568089 98568142 -68082154 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 2 1337 279 0 0 0 chrX 98569459 98569490 -68080806 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1337 289 296 118 29 chrX 98569514 98569650 -68080646 - B1F2 SINE Alu -1 148 1 2 1337 318 211 0 0 chrX 98569651 98569708 -68080588 + CT-rich Low_complexity Low_complexity 2 58 0 2 1337 880 154 21 0 chrX 98569723 98569866 -68080430 + B1_Mus2 SINE Alu 2 147 0 2 1337 24 53 0 0 chrX 98569874 98569912 -68080384 + AT_rich Low_complexity Low_complexity 1 38 0 2 1337 591 228 129 29 chrX 98569926 98570066 -68080230 - B3 SINE B2 -15 201 48 2 1337 360 284 148 0 chrX 98570142 98570230 -68080066 - B3A SINE B2 -97 101 1 2 1337 231 209 0 0 chrX 98570239 98570282 -68080014 + (ATG)n Simple_repeat Simple_repeat 2 44 0 2 1337 1083 191 16 0 chrX 98570292 98570481 -68079815 - B3 SINE B2 -24 192 1 2 1337 801 282 42 13 chrX 98570522 98570759 -68079537 + MIR SINE MIR 7 250 -12 2 1337 237 303 0 0 chrX 98570880 98570946 -68079350 + G-rich Low_complexity Low_complexity 1 66 0 2 1337 274 296 102 32 chrX 98571140 98571297 -68078999 + L2c LINE L2 2993 3160 -227 2 1337 216 97 0 0 chrX 98571304 98571335 -68078961 + (TCC)n Simple_repeat Simple_repeat 3 33 0 2 1337 628 130 160 61 chrX 98571335 98571466 -68078830 - B1_Mus2 SINE Alu 0 147 4 2 1337 1135 82 0 7 chrX 98573255 98573403 -68076893 + B1_Mus2 SINE Alu 1 147 0 2 1337 709 238 20 27 chrX 98573525 98573672 -68076624 - B1_Mur2 SINE Alu -2 147 2 2 1337 351 0 0 0 chrX 98573683 98573722 -68076574 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2 1337 723 120 49 2 chrX 98573725 98573849 -68076447 - B1_Mur4 SINE Alu -8 142 1 2 1337 399 211 43 22 chrX 98573964 98574056 -68076240 + B1F SINE Alu 7 100 -49 2 1337 710 207 152 20 chrX 98574555 98574752 -68075544 - ID_B1 SINE B4 0 224 2 2 1337 320 281 36 28 chrX 98574998 98575134 -68075162 + MIRb SINE MIR 31 168 -108 2 1337 814 143 56 28 chrX 98575826 98575970 -68074326 - B1_Mur4 SINE Alu -1 149 2 2 1337 344 267 201 62 chrX 98576118 98576262 -68074034 - RSINE1 SINE B4 0 165 2 2 1337 693 222 6 115 chrX 98576383 98576566 -68073730 - RSINE1 SINE B4 0 165 3 2 1337 186 236 0 0 chrX 98576654 98576709 -68073587 + CT-rich Low_complexity Low_complexity 2 56 0 2 1337 675 225 7 7 chrX 98576723 98576862 -68073434 - B1_Mur3 SINE Alu -10 139 1 2 1337 667 230 0 57 chrX 98576877 98577034 -68073262 - B1_Mur1 SINE Alu 0 149 2 2 1337 476 270 87 0 chrX 98577325 98577440 -68072856 - ID_B1 SINE B4 -15 209 85 2 1337 272 275 23 70 chrX 98577445 98577531 -68072765 - PB1 SINE Alu -41 86 5 2 1337 252 227 111 20 chrX 98578081 98578180 -68072116 - MIRb SINE MIR -69 199 92 2 1337 188 281 118 47 chrX 98581046 98581173 -68069123 - MIR3 SINE MIR -65 143 8 2 1337 593 119 10 0 chrX 98581303 98581404 -68068892 + (GA)n Simple_repeat Simple_repeat 1 102 0 2 1337 284 83 0 0 chrX 98581571 98581607 -68068689 - U2 snRNA snRNA -152 36 1 2 1337 183 338 24 24 chrX 98581708 98581790 -68068506 + MIRm SINE MIR 18 99 -177 2 1337 260 216 104 39 chrX 98582163 98582240 -68068056 + B1F SINE Alu 66 147 -2 2 1337 228 174 122 68 chrX 98582440 98582514 -68067782 + ID4_ SINE ID 1 78 -5 2 1337 618 246 0 0 chrX 98582604 98582722 -68067574 + B1_Mur2 SINE Alu 18 135 -14 2 1337 308 328 141 10 chrX 98583012 98583218 -68067078 + MIRc SINE MIR 5 237 -31 2 1337 762 156 217 11 chrX 98583223 98583398 -68066898 + B3 SINE B2 1 211 -5 2 1337 612 215 80 15 chrX 98583431 98583568 -68066728 + ID_B1 SINE B4 78 223 -1 2 1337 1112 76 70 6 chrX 98583702 98583874 -68066422 + B2_Mm1a SINE B2 15 184 -9 2 1337 1187 62 0 20 chrX 98583874 98584023 -68066273 - B1_Mus2 SINE Alu 0 147 2 2 1337 985 144 5 77 chrX 98584023 98584045 -68066251 + B2_Mm2 SINE B2 182 195 0 2 1337 709 217 14 0 chrX 98584064 98584202 -68066094 + B1_Mur3 SINE Alu 1 140 -9 2 1337 322 253 63 0 chrX 98584235 98584314 -68065982 + PB1D10 SINE Alu 13 96 -21 2 1337 1181 48 7 0 chrX 98585080 98585225 -68065071 + B1_Mus1 SINE Alu 1 146 -2 2 1337 912 115 7 14 chrX 98585238 98585379 -68064917 + B1_Mur4 SINE Alu 11 150 0 2 1337 851 250 85 0 chrX 98585397 98585585 -68064711 + B3 SINE B2 2 205 -11 2 1337 262 167 217 0 chrX 98585624 98585684 -68064612 + ID_B1 SINE B4 126 198 -26 2 1337 752 298 54 0 chrX 98585714 98585919 -68064377 + ID_B1 SINE B4 9 224 0 2 1337 221 213 0 21 chrX 98585919 98585967 -68064329 + A-rich Low_complexity Low_complexity 1 47 0 2 1337 652 258 0 35 chrX 98585967 98586136 -68064160 + RSINE1 SINE B4 3 165 0 2 1337 21 36 0 0 chrX 98586153 98586181 -68064115 + AT_rich Low_complexity Low_complexity 1 28 0 2 1337 253 279 46 0 chrX 98586310 98586402 -68063894 + BC1_Mm scRNA scRNA 5 97 -55 2 1337 243 325 13 0 chrX 98586485 98586562 -68063734 - PB1D10 SINE Alu -38 79 2 2 1337 827 267 23 0 chrX 98587038 98587210 -68063086 + B3A SINE B2 7 182 -16 2 1337 543 31 0 0 chrX 98587211 98587276 -68063020 + (TAAA)n Simple_repeat Simple_repeat 3 67 0 2 1337 598 286 32 19 chrX 98587288 98587445 -68062851 + RSINE1 SINE B4 3 161 -4 2 1337 26 0 0 0 chrX 98587860 98587886 -68062410 + AT_rich Low_complexity Low_complexity 1 26 0 2 1337 318 50 0 0 chrX 98587896 98587936 -68062360 + (T)n Simple_repeat Simple_repeat 1 40 0 2 1337 1498 46 0 0 chrX 98587959 98588134 -68062162 - B2_Mm1a SINE B2 -18 175 1 2 1337 483 162 0 0 chrX 98588149 98588229 -68062067 - B1_Mur1 SINE Alu 0 149 70 2 1337 690 246 63 18 chrX 98588241 98588419 -68061877 - ID_B1 SINE B4 -8 216 34 2 1337 1512 173 83 0 chrX 98588434 98588700 -68061596 + ORR1C2 LTR MaLR 1 288 -96 2 1337 733 156 32 24 chrX 98588701 98588826 -68061470 + B1_Mur4 SINE Alu 5 130 -20 2 1337 686 136 9 0 chrX 98588859 98588969 -68061327 + ORR1C2 LTR MaLR 274 384 0 2 1337 2196 187 156 19 chrX 98588969 98589455 -68060841 - RMER15 LTR ERVL -22 553 1 2 1337 229 245 41 0 chrX 98589514 98589563 -68060733 + ID_B1 SINE B4 121 171 -53 2 1337 299 274 58 23 chrX 98589605 98589691 -68060605 + RSINE1 SINE B4 76 164 -1 2 1337 803 242 116 0 chrX 98589737 98589935 -68060361 + ID_B1 SINE B4 2 222 -2 2 1337 235 226 57 0 chrX 98589974 98590027 -68060269 + RSINE1 SINE B4 104 159 -6 2 1337 221 0 35 0 chrX 98590041 98590070 -68060226 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 2 1337 380 289 93 0 chrX 98590145 98590242 -68060054 + RSINE1 SINE B4 6 111 -54 2 1337 28 0 0 0 chrX 98590283 98590311 -68059985 + AT_rich Low_complexity Low_complexity 1 28 0 2 1337 440 157 29 0 chrX 98590318 98590388 -68059908 + B1_Mus2 SINE Alu 1 72 -75 2 1337 1022 30 0 51 chrX 98590394 98590532 -68059764 + B1_Mus1 SINE Alu 18 148 0 2 1337 181 85 0 78 chrX 98590532 98590583 -68059713 + A-rich Low_complexity Low_complexity 6 52 0 2 1337 263 325 68 68 chrX 98590634 98590796 -68059500 - MIRb SINE MIR -21 247 86 3 1337 598 234 43 0 chrX 98590798 98590939 -68059357 + B1_Mur2 SINE Alu 1 147 -2 3 1337 356 270 34 0 chrX 98590993 98591082 -68059214 + PB1D10 SINE Alu 17 108 -9 3 1337 261 241 0 17 chrX 98591168 98591227 -68059069 - ID2 SINE ID -9 74 17 3 1337 627 226 151 0 chrX 98591564 98591723 -68058573 - B3 SINE B2 -10 206 24 3 1337 186 43 0 0 chrX 98591724 98591747 -68058549 + (CACCC)n Simple_repeat Simple_repeat 4 26 0 3 1337 250 296 14 0 chrX 98591878 98591949 -68058347 - ID4 SINE ID -11 72 1 3 1337 404 292 111 83 chrX 98592397 98592642 -68057654 - MIR SINE MIR -10 252 4 3 1337 681 171 73 0 chrX 98592720 98592843 -68057453 + B1_Mur1 SINE Alu 18 149 0 3 1337 779 267 55 50 chrX 98592857 98593058 -68057238 + B3A SINE B2 1 202 -14 3 1337 1198 68 0 0 chrX 98593073 98593220 -68057076 - B1_Mus1 SINE Alu 0 148 2 3 1337 735 224 117 106 chrX 98593256 98593288 -68057008 + B4A SINE B4 5 35 -257 3 1337 459 52 0 0 chrX 98593288 98593346 -68056950 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 1337 735 224 117 106 chrX 98593346 98593402 -68056894 + B4A SINE B4 36 81 -211 3 1337 508 219 17 9 chrX 98593402 98593517 -68056779 + PB1D9 SINE Alu 4 119 -1 3 1337 735 224 117 106 chrX 98593517 98593701 -68056595 + B4A SINE B4 82 280 -12 3 1337 396 0 0 0 chrX 98593791 98593835 -68056461 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 3 1337 352 270 14 0 chrX 98593835 98593909 -68056387 - ID4 SINE ID -7 76 2 3 1337 420 253 0 0 chrX 98593930 98594013 -68056283 - PB1D10 SINE Alu -29 88 6 3 1337 243 257 16 114 chrX 98594013 98594051 -68056245 - MT2B LTR ERVL -353 246 138 3 1337 231 385 13 0 chrX 98594095 98594173 -68056123 - MER81 DNA AcHobo -13 101 23 3 1337 414 0 0 0 chrX 98594320 98594366 -68055930 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1337 319 275 0 24 chrX 98594572 98594654 -68055642 - MER96 DNA hAT -44 131 52 3 1337 733 230 0 0 chrX 98594932 98595067 -68055229 - B1_Mur1 SINE Alu -5 144 10 3 1337 360 0 0 0 chrX 98595107 98595147 -68055149 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1337 573 236 9 0 chrX 98595147 98595257 -68055039 - RSINE1 SINE B4 -51 114 4 3 1337 551 284 0 0 chrX 98595360 98595476 -68054820 - PB1D7 SINE Alu -2 118 3 3 1337 261 297 0 106 chrX 98595377 98595490 -68054806 - MT2B2 LTR ERVL -330 254 154 3 1337 315 0 0 0 chrX 98595533 98595568 -68054728 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1337 219 291 0 0 chrX 98595599 98595654 -68054642 - RSINE1 SINE B4 -26 139 85 3 1337 341 308 75 19 chrX 98595759 98595865 -68054431 + PB1D10 SINE Alu 6 117 0 3 1337 197 125 53 18 chrX 98595865 98595922 -68054374 + GA-rich Low_complexity Low_complexity 1 59 0 3 1337 1524 198 50 117 chrX 98596182 98596347 -68053949 - ORR1D1 LTR MaLR 0 374 200 3 1337 369 0 0 0 chrX 98596347 98596388 -68053908 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1337 1524 198 50 117 chrX 98596388 98596438 -68053858 - ORR1D1 LTR MaLR -175 199 176 3 1337 192 40 0 0 chrX 98596438 98596463 -68053833 + (CAGAGA)n Simple_repeat Simple_repeat 6 30 0 3 1337 1524 198 50 117 chrX 98596463 98596619 -68053677 - ORR1D1 LTR MaLR -199 175 28 3 1337 3212 66 10 0 chrX 98596619 98597015 -68053281 + MTB LTR MaLR 1 400 0 3 1337 1524 198 50 117 chrX 98597015 98597042 -68053254 - ORR1D1 LTR MaLR -347 27 1 3 1337 1046 196 9 33 chrX 98597080 98597291 -68053005 + B3 SINE B2 6 211 -5 3 1337 369 58 0 0 chrX 98597309 98597361 -68052935 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1337 222 266 138 12 chrX 98597361 98597441 -68052855 - B3A SINE B2 -60 138 49 3 1337 1142 190 18 32 chrX 98597473 98597691 -68052605 - B3 SINE B2 0 216 2 3 1337 308 214 90 0 chrX 98597723 98597817 -68052479 - PB1D7 SINE Alu -3 124 19 3 1337 510 194 71 0 chrX 98597928 98598026 -68052270 + PB1D9 SINE Alu 1 105 -15 3 1337 1069 200 24 10 chrX 98598058 98598265 -68052031 - B3 SINE B2 -6 210 1 3 1337 24 0 0 0 chrX 98598267 98598291 -68052005 + AT_rich Low_complexity Low_complexity 1 24 0 3 1337 994 91 0 0 chrX 98598461 98598593 -68051703 - B1_Mus1 SINE Alu -5 143 12 3 1337 204 67 0 0 chrX 98598746 98598776 -68051520 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1337 752 201 20 14 chrX 98598996 98599142 -68051154 - B1_Mus1 SINE Alu 0 148 2 3 1337 843 201 185 0 chrX 98599216 98599405 -68050891 - ID_B1 SINE B4 0 224 1 3 1337 640 223 25 0 chrX 98599413 98599534 -68050762 - ID_B1 SINE B4 -8 216 93 3 1337 247 276 67 82 chrX 98599414 98599548 -68050748 + YREP_Mm Unknown Unknown 186 317 -1495 3 1337 257 333 12 0 chrX 98601498 98601579 -68048717 + ID4 SINE ID 2 83 0 3 1337 198 103 0 0 chrX 98601586 98601615 -68048681 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 3 1337 766 259 103 33 chrX 98601937 98602209 -68048087 - B4A SINE B4 0 292 2 3 1337 271 173 0 55 chrX 98602947 98603002 -68047294 - B1_Mur4 SINE Alu -10 140 89 3 1337 396 224 70 20 chrX 98603175 98603275 -68047021 - PB1 SINE Alu -2 125 21 3 1337 873 184 0 0 chrX 98603372 98603508 -68046788 - B1_Mur1 SINE Alu -13 136 1 3 1337 455 238 29 38 chrX 98603516 98603621 -68046675 - PB1D10 SINE Alu -5 112 9 3 1337 272 266 85 0 chrX 98605648 98605742 -68044554 + ID_B1 SINE B4 121 222 -2 3 1337 211 157 73 73 chrX 98605693 98605748 -68044548 + PB1D10 SINE Alu 63 117 0 3 1337 257 238 79 0 chrX 98605753 98605816 -68044480 + ID4 SINE ID 2 69 -14 3 1337 230 184 0 0 chrX 98605824 98605873 -68044423 + L1MB2 LINE L1 6075 6123 -48 3 1337 1230 250 7 17 chrX 98605884 98606177 -68044119 + B4 SINE B4 1 290 -2 3 1337 663 225 224 6 chrX 98606238 98606417 -68043879 + ID_B1 SINE B4 3 220 -4 3 1337 203 146 24 0 chrX 98609885 98609926 -68040370 + GA-rich Low_complexity Low_complexity 2 43 0 3 1337 23 0 0 0 chrX 98610284 98610307 -68039989 + AT_rich Low_complexity Low_complexity 1 23 0 3 1337 289 302 22 80 chrX 98611885 98612022 -68038274 + MamGypLTR3 LTR Gypsy 604 732 -107 3 1337 22 0 0 0 chrX 98615719 98615741 -68034555 + GC_rich Low_complexity Low_complexity 1 22 0 3 1337 195 69 0 0 chrX 98616103 98616132 -68034164 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 1337 370 221 125 10 chrX 98616867 98616963 -68033333 + PB1D7 SINE Alu 6 112 -8 3 1337 380 210 188 10 chrX 98616968 98617069 -68033227 + PB1D7 SINE Alu 1 119 -1 3 1337 428 261 174 0 chrX 98617111 98617249 -68033047 + RSINE1 SINE B4 3 164 -1 3 1337 952 250 97 0 chrX 98617283 98617551 -68032745 + L1MC1 LINE L1 6012 6305 -28 3 1337 474 227 33 83 chrX 98617692 98617775 -68032521 - ID_B1 SINE B4 -26 198 116 3 1337 207 0 0 0 chrX 98617775 98617798 -68032498 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1337 1214 49 0 0 chrX 98617798 98617942 -68032354 - B1_Mus2 SINE Alu -3 144 1 3 1337 474 227 33 83 chrX 98617942 98617977 -68032319 - ID_B1 SINE B4 -109 115 86 3 1337 279 282 0 14 chrX 98617982 98618054 -68032242 - ID4 SINE ID -11 72 2 3 1337 309 51 0 0 chrX 98618063 98618102 -68032194 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 3 1337 235 310 84 0 chrX 98618104 98618175 -68032121 - ID4_ SINE ID 0 83 7 3 1337 285 323 29 39 chrX 98618205 98618216 -68032080 + ID SINE ID 75 84 -140 3 1337 422 254 76 34 chrX 98618216 98618334 -68031962 + B1F1 SINE Alu 2 124 -25 3 1337 257 295 44 109 chrX 98618218 98618355 -68031941 + MT2B2 LTR ERVL 168 295 -289 3 1337 275 312 0 0 chrX 98618353 98618417 -68031879 + PB1D10 SINE Alu 36 99 -18 3 1337 279 269 49 91 chrX 98618376 98618519 -68031777 + MT2B LTR ERVL 127 263 -338 3 1337 667 208 30 8 chrX 98618422 98618553 -68031743 + B1_Mur1 SINE Alu 10 143 -6 3 1337 470 231 22 0 chrX 98618662 98618753 -68031543 + B1_Mus2 SINE Alu 47 139 -8 3 1337 348 24 0 0 chrX 98618761 98618802 -68031494 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1337 192 179 0 0 chrX 98618830 98618869 -68031427 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 3 1337 351 198 59 151 chrX 98618931 98619050 -68031246 + B1_Mus1 SINE Alu 1 108 -40 3 1337 278 226 102 45 chrX 98619036 98619124 -68031172 + RSINE1 SINE B4 73 165 0 3 1337 746 213 7 0 chrX 98619278 98619419 -68030877 - B1_Mur1 SINE Alu -5 144 3 3 1337 282 95 0 0 chrX 98619445 98619487 -68030809 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1337 261 108 0 0 chrX 98619494 98619531 -68030765 - PB1D10 SINE Alu -17 100 64 3 1337 1407 40 0 0 chrX 98619542 98619715 -68030581 - L1Md_A LINE L1 0 6582 6410 3 1337 1110 52 0 0 chrX 98619743 98619878 -68030418 + B1_Mm SINE Alu 3 137 -10 3 1337 843 232 39 15 chrX 98619902 98620108 -68030188 - B3 SINE B2 -3 213 3 3 1337 390 280 74 9 chrX 98620156 98620264 -68030032 - RSINE1 SINE B4 -46 119 5 3 1337 241 267 67 8 chrX 98620490 98620583 -68029713 + PB1 SINE Alu 11 110 -7 3 1337 1489 68 0 5 chrX 98620588 98620780 -68029516 + B2_Mm2 SINE B2 5 195 0 3 1337 387 204 47 3 chrX 98620820 98620900 -68029396 + B3A SINE B2 17 100 -116 3 1337 5123 46 20 9 chrX 98620912 98621554 -68028742 + L1Md_F2 LINE L1 5922 6570 -12 3 1337 203 136 45 0 chrX 98621569 98621613 -68028683 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 3 1337 388 302 23 0 chrX 98621639 98621725 -68028571 - RSINE1 SINE B4 -77 88 1 3 1337 814 131 71 28 chrX 98621743 98621884 -68028412 - B1_Mur1 SINE Alu -2 147 1 4 1337 247 306 0 14 chrX 98621894 98621967 -68028329 - PB1D10 SINE Alu -13 104 33 4 1337 1320 81 21 16 chrX 98621976 98622164 -68028132 - B2_Mm2 SINE B2 -6 189 1 4 1337 837 165 21 35 chrX 98622186 98622330 -68027966 - B1_Mus1 SINE Alu 0 148 7 4 1337 1653 104 125 7 chrX 98622410 98622690 -68027606 - Lx2A LINE L1 -1 7007 6695 4 1337 846 154 29 0 chrX 98622694 98622830 -68027466 - B1_Mus1 SINE Alu -1 147 8 4 1337 811 232 27 16 chrX 98622831 98623019 -68027277 - B3 SINE B2 -26 190 1 4 1337 719 171 229 0 chrX 98623069 98623239 -68027057 + B3 SINE B2 1 209 -7 4 1337 771 202 71 6 chrX 98623250 98623419 -68026877 - B3 SINE B2 -36 180 1 4 1337 380 224 91 41 chrX 98623517 98623638 -68026658 - B1F1 SINE Alu -2 147 21 4 1337 379 173 35 24 chrX 98626675 98626774 -68023522 + PB1D9 SINE Alu 10 105 -15 4 1337 392 257 38 0 chrX 98626828 98626933 -68023363 + B1_Mur2 SINE Alu 41 149 0 4 1337 996 64 55 35 chrX 98627059 98627204 -68023092 - B1_Mus1 SINE Alu 0 148 1 4 1337 451 78 14 0 chrX 98627216 98627328 -68022968 - B2_Mm2 SINE B2 -1 194 47 4 1337 1216 92 11 17 chrX 98627343 98627520 -68022776 - B2_Mm1t SINE B2 -16 177 2 4 1337 190 330 125 42 chrX 98627783 98627903 -68022393 + MIR3 SINE MIR 34 163 -45 4 1337 486 258 73 29 chrX 98627927 98628063 -68022233 - B1_Mur1 SINE Alu -5 144 3 4 1337 252 203 13 92 chrX 98628065 98628141 -68022155 - B1F SINE Alu 0 149 80 4 1337 287 312 60 60 chrX 98628428 98628544 -68021752 - PB1D10 SINE Alu -1 116 1 4 1337 471 132 349 0 chrX 98628652 98628758 -68021538 + B1_Mur3 SINE Alu 1 143 -6 4 1337 316 273 45 0 chrX 98629229 98629317 -68020979 - PB1D9 SINE Alu -13 107 16 4 1337 1563 58 0 0 chrX 98629320 98629509 -68020787 + B2_Mm1t SINE B2 1 189 -4 4 1337 562 172 24 57 chrX 98629634 98629757 -68020539 - PB1D9 SINE Alu 0 120 2 4 1337 285 211 121 37 chrX 98629852 98629936 -68020360 - B3 SINE B2 -72 123 30 4 1337 1253 77 18 0 chrX 98629970 98630140 -68020156 - B2_Mm1t SINE B2 -19 174 2 4 1337 1059 66 66 0 chrX 98630158 98630295 -68020001 - B1_Mm SINE Alu -1 146 1 4 1337 1082 101 24 0 chrX 98630309 98630477 -68019819 - L1Md_F2 LINE L1 0 6582 6411 4 1337 739 258 26 16 chrX 98630505 98630698 -68019598 + B3A SINE B2 1 195 -3 4 1337 1934 198 159 13 chrX 98630724 98631189 -68019107 - MT2A LTR ERVL 0 533 1 4 1337 327 304 115 19 chrX 98631240 98631344 -68018952 - B3A SINE B2 -37 179 66 4 1337 389 248 37 25 chrX 98631338 98631462 -68018834 - PB1D10 SINE Alu -10 140 12 4 1337 273 181 203 27 chrX 98631493 98631567 -68018729 + B1_Mur1 SINE Alu 60 146 -3 4 1337 508 259 90 15 chrX 98631566 98631699 -68018597 + B1_Mur3 SINE Alu 1 143 -6 4 1337 297 269 0 25 chrX 98631710 98631790 -68018506 - RSINE1 SINE B4 -29 136 59 4 1337 392 200 0 0 chrX 98631874 98631939 -68018357 + PB1D9 SINE Alu 6 70 -50 4 1337 578 244 236 34 chrX 98632010 98632188 -68018108 + B3 SINE B2 1 214 -2 4 1337 324 182 0 185 chrX 98632197 98632305 -68017991 + MT2B LTR ERVL 153 240 -361 4 1337 500 171 0 74 chrX 98632213 98632308 -68017988 + B1_Mur4 SINE Alu 2 89 -61 4 1337 266 254 0 35 chrX 98632369 98632426 -68017870 - B1_Mur4 SINE Alu -91 59 5 4 1337 294 143 0 0 chrX 98632608 98632671 -68017625 + (CAG)n Simple_repeat Simple_repeat 2 64 0 4 1337 288 247 108 91 chrX 98632840 98632860 -68017436 - ID_B1 SINE B4 -1 223 179 4 1337 471 163 133 0 chrX 98632860 98632958 -68017338 - B1_Mus2 SINE Alu -10 137 27 4 1337 288 247 108 91 chrX 98632958 98633009 -68017287 - ID_B1 SINE B4 -1 178 54 4 1337 315 255 124 31 chrX 98632976 98633073 -68017223 - PB1D9 SINE Alu -7 113 8 4 1337 710 236 94 84 chrX 98633102 98633305 -68016991 - B3 SINE B2 -6 210 6 4 1337 1160 68 0 0 chrX 98633320 98633467 -68016829 - B1_Mus2 SINE Alu 0 147 1 4 1337 687 247 95 50 chrX 98633784 98633984 -68016312 + B3A SINE B2 5 213 -3 4 1337 250 276 51 26 chrX 98633970 98634048 -68016248 + B3 SINE B2 47 126 -90 4 1337 365 309 100 0 chrX 98634136 98634246 -68016050 + RSINE1 SINE B4 43 163 -2 4 1337 438 175 11 62 chrX 98634294 98634471 -68015825 + RMER17C LTR ERVK 100 267 -143 4 1337 708 188 9 0 chrX 98635132 98635244 -68015052 - B1_Mur4 SINE Alu -36 114 2 4 1337 389 323 40 16 chrX 98635244 98635257 -68015039 - B4 SINE B4 -89 202 75 4 1337 1635 11 22 0 chrX 98635307 98635491 -68014805 - B2_Mm1a SINE B2 -4 189 2 4 1337 419 297 10 0 chrX 98636031 98636132 -68014164 + B3 SINE B2 112 213 -3 4 1337 532 168 98 45 chrX 98636199 98636311 -68013985 - B1_Mur2 SINE Alu -27 122 5 4 1337 3671 55 7 0 chrX 98636316 98636770 -68013526 - L1Md_F2 LINE L1 0 6582 6126 4 1337 307 360 55 23 chrX 98637316 98637444 -68012852 - RSINE1 SINE B4 -11 154 23 4 1337 808 222 81 5 chrX 98637473 98637659 -68012637 + B3 SINE B2 3 202 -14 4 1337 389 259 220 17 chrX 98637665 98637783 -68012513 + ID_B1 SINE B4 83 224 0 4 1337 344 337 29 39 chrX 98638030 98638132 -68012164 + PB1D7 SINE Alu 6 106 -14 4 1337 606 284 178 54 chrX 98639067 98639288 -68011008 - MTD LTR MaLR 0 419 177 4 1337 711 146 30 68 chrX 98639288 98639420 -68010876 - B1_Mur3 SINE Alu -19 130 4 4 1337 606 284 178 54 chrX 98639420 98639496 -68010800 - MTD LTR MaLR -243 176 86 4 1337 286 300 43 0 chrX 98639766 98639836 -68010460 - RSINE1 SINE B4 -75 90 18 4 1337 384 316 36 29 chrX 98640803 98640891 -68009405 - B4 SINE B4 -119 173 85 4 1337 931 169 7 0 chrX 98640891 98641039 -68009257 - B1_Mur2 SINE Alu 0 149 1 4 1337 384 316 36 29 chrX 98641039 98641087 -68009209 - B4 SINE B4 -208 84 36 4 1337 964 81 180 0 chrX 98641106 98641267 -68009029 - B2_Mm1a SINE B2 -3 190 1 4 1337 180 0 0 0 chrX 98641590 98641610 -68008686 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 1337 566 325 102 41 chrX 98641614 98641880 -68008416 - B4 SINE B4 -7 285 4 4 1337 1331 73 44 11 chrX 98642140 98642320 -68007976 - B2_Mm2 SINE B2 -8 187 2 4 1337 214 236 245 11 chrX 98642344 98642438 -68007858 - PB1D10 SINE Alu 0 117 2 4 1337 395 242 121 0 chrX 98645485 98645584 -68004712 - PB1D10 SINE Alu 0 117 7 4 1337 281 281 21 53 chrX 98645767 98645861 -68004435 + B1F SINE Alu 1 91 -58 4 1337 434 308 17 0 chrX 98645892 98646012 -68004284 + B1F1 SINE Alu 28 149 0 4 1337 495 300 7 41 chrX 98646025 98646171 -68004125 + RSINE1 SINE B4 14 154 -11 4 1337 439 169 102 31 chrX 98646315 98646413 -68003883 - B3A SINE B2 -93 105 1 4 1337 831 160 28 7 chrX 98646429 98646574 -68003722 + B1_Mur3 SINE Alu 2 149 0 4 1337 236 237 139 38 chrX 98646764 98646843 -68003453 + L3 LINE CR1 3488 3574 -915 4 1337 562 193 92 0 chrX 98649096 98649215 -68001081 + ID_B1 SINE B4 82 211 -13 4 1337 234 340 76 21 chrX 98649104 98649248 -68001048 - YREP_Mm Unknown Unknown -1505 307 156 4 1337 522 206 133 67 chrX 98649270 98649405 -68000891 + B1F SINE Alu 1 144 -5 4 1337 398 271 93 0 chrX 98649416 98649534 -68000762 + B1F SINE Alu 4 132 -17 4 1337 267 298 36 0 chrX 98649643 98649727 -68000569 - PB1D7 SINE Alu -29 91 5 4 1337 236 301 96 0 chrX 98649756 98649829 -68000467 - ID4_ SINE ID 0 83 4 4 1337 595 252 27 47 chrX 98649873 98650023 -68000273 + B3A SINE B2 36 182 -16 4 1337 285 98 0 0 chrX 98650023 98650064 -68000232 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1337 433 220 136 0 chrX 98650235 98650353 -67999943 + MER2 DNA MER2_type 148 281 -64 4 1337 535 255 56 21 chrX 98650469 98650613 -67999683 - B1F SINE Alu 0 149 1 4 1337 252 221 107 225 chrX 98650697 98650866 -67999430 + RSINE1 SINE B4 17 165 0 4 1337 212 229 27 54 chrX 98650957 98651031 -67999265 + CT-rich Low_complexity Low_complexity 1 72 0 4 1337 529 191 0 0 chrX 98651031 98651115 -67999181 - B1F2 SINE Alu -16 133 50 4 1337 221 145 71 14 chrX 98651417 98651487 -67998809 + CT-rich Low_complexity Low_complexity 4 77 0 4 1337 194 98 0 47 chrX 98651494 98651537 -67998759 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 4 1337 479 213 79 53 chrX 98651540 98651654 -67998642 - B1_Mur1 SINE Alu -5 144 28 4 1337 405 0 0 0 chrX 98651654 98651699 -67998597 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 4 1337 24 0 0 0 chrX 98651723 98651747 -67998549 + AT_rich Low_complexity Low_complexity 1 24 0 4 1337 797 212 27 0 chrX 98651749 98651895 -67998401 - B1_Mur4 SINE Alu 0 150 1 4 1337 1518 58 5 11 chrX 98651907 98652098 -67998198 - B2_Mm2 SINE B2 -4 191 2 4 1337 723 203 51 0 chrX 98652133 98652271 -67998025 + B1_Mur1 SINE Alu 5 149 0 4 1337 494 288 75 54 chrX 98652302 98652449 -67997847 - RSINE1 SINE B4 -8 157 8 4 1337 323 268 32 89 chrX 98652541 98652664 -67997632 + PB1D10 SINE Alu 1 116 -1 4 1337 704 250 0 7 chrX 98652686 98652835 -67997461 + B1_Mur1 SINE Alu 2 149 0 4 1337 516 304 7 0 chrX 98652845 98652980 -67997316 + ID_B1 SINE B4 66 201 -23 4 1337 202 206 0 0 chrX 98653300 98653334 -67996962 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1337 600 219 95 53 chrX 98653350 98653495 -67996801 - B4A SINE B4 -4 288 136 5 1337 198 0 0 0 chrX 98653495 98653517 -67996779 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 1337 600 219 95 53 chrX 98653517 98653540 -67996756 - B4A SINE B4 -157 135 113 5 1337 583 256 0 8 chrX 98653556 98653682 -67996614 - B1_Mur2 SINE Alu -1 148 24 5 1337 273 281 0 0 chrX 98653670 98653734 -67996562 - B1F1 SINE Alu -68 81 18 5 1337 296 266 0 0 chrX 98653716 98653780 -67996516 - B1F1 SINE Alu -68 81 18 5 1337 351 284 0 0 chrX 98653762 98653843 -67996453 - B1F1 SINE Alu -68 81 1 5 1337 330 264 0 84 chrX 98653773 98653868 -67996428 - B4 SINE B4 -137 155 69 5 1337 183 275 0 0 chrX 98654152 98654192 -67996104 - MIRb SINE MIR -36 232 193 5 1337 272 288 14 0 chrX 98654295 98654368 -67995928 - ID4_ SINE ID -8 75 2 5 1337 212 162 0 0 chrX 98654543 98654580 -67995716 + T-rich Low_complexity Low_complexity 3 39 0 5 1337 423 261 108 0 chrX 98654584 98654695 -67995601 - ID_B1 SINE B4 -20 204 82 5 1337 379 275 111 55 chrX 98654734 98654969 -67995327 + L2 LINE L2 1975 2222 -1197 5 1337 555 16 0 0 chrX 98654975 98655039 -67995257 + (TC)n Simple_repeat Simple_repeat 2 65 0 5 1337 207 0 0 0 chrX 98655043 98655066 -67995230 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1337 959 104 22 0 chrX 98655066 98655201 -67995095 - B1_Mus2 SINE Alu -9 138 1 5 1337 4063 185 43 11 chrX 98655364 98656156 -67994140 - Lx2B LINE L1 0 7000 6184 5 1337 1369 84 15 25 chrX 98656159 98656355 -67993941 - B2_Mm2 SINE B2 0 195 2 5 1337 239 148 18 53 chrX 98656415 98656472 -67993824 + B1_Mus2 SINE Alu 93 147 0 5 1337 199 105 50 50 chrX 98656472 98656552 -67993744 + A-rich Low_complexity Low_complexity 1 80 0 5 1337 414 271 40 124 chrX 98656552 98656586 -67993710 + B4 SINE B4 67 185 -107 5 1337 748 174 23 8 chrX 98656586 98656719 -67993577 + B1_Mur1 SINE Alu 7 141 -8 5 1337 486 263 42 42 chrX 98656960 98657103 -67993193 - B1F1 SINE Alu -2 147 5 5 1337 502 274 109 5 chrX 98657146 98657348 -67992948 + ID_B1 SINE B4 1 223 -1 5 1337 360 111 0 0 chrX 98657389 98657452 -67992844 + (TC)n Simple_repeat Simple_repeat 2 64 0 5 1337 360 0 0 0 chrX 98657452 98657492 -67992804 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1337 188 357 95 0 chrX 98658341 98658425 -67991871 - L2c LINE L2 -304 3083 2992 5 1337 453 311 16 0 chrX 98658885 98659007 -67991289 + ID_B1 SINE B4 96 219 -5 5 1337 947 254 157 31 chrX 98659055 98659412 -67990884 + Lx8 LINE L1 6685 7086 -387 5 1337 492 89 6 26 chrX 98659483 98659567 -67990729 - B1_Mur3 SINE Alu -1 148 62 5 1337 239 328 16 0 chrX 98659585 98659649 -67990647 + Lx8 LINE L1 7211 7275 -198 5 1337 441 0 0 0 chrX 98659731 98659780 -67990516 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1337 584 260 109 29 chrX 98659942 98660180 -67990116 + L1MC5 LINE L1 7657 7913 -48 5 1337 525 224 35 50 chrX 98661008 98661149 -67989147 - B1_Mur1 SINE Alu 0 149 11 5 1337 225 343 45 110 chrX 98661014 98661168 -67989128 - B4 SINE B4 -69 223 80 5 1337 473 270 47 16 chrX 98661289 98661417 -67988879 + B1_Mm SINE Alu 1 132 -15 5 1337 3679 49 2 4 chrX 98661521 98661974 -67988322 - L1Md_F3 LINE L1 -3 6581 6130 5 1337 379 304 54 0 chrX 98662002 98662114 -67988182 + ID_B1 SINE B4 105 222 -2 5 1337 410 282 0 25 chrX 98662131 98662251 -67988045 + PB1D9 SINE Alu 4 120 0 5 1337 870 189 0 39 chrX 98662303 98662457 -67987839 + B1_Mur4 SINE Alu 1 148 -2 5 1337 1465 56 17 0 chrX 98662498 98662676 -67987620 - B2_Mm2 SINE B2 -14 181 1 5 1337 939 272 16 0 chrX 98662704 98662895 -67987401 - B3 SINE B2 -12 204 11 5 1337 1662 42 0 0 chrX 98662922 98663114 -67987182 - B2_Mm1a SINE B2 0 193 2 5 1337 504 0 0 0 chrX 98663375 98663431 -67986865 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1337 583 234 36 7 chrX 98663447 98663585 -67986711 - B3A SINE B2 -55 143 2 5 1337 217 323 82 10 chrX 98663586 98663683 -67986613 + L2a LINE L2 2994 3097 -329 5 1337 243 295 155 0 chrX 98663688 98663817 -67986479 + L1MC5 LINE L1 6990 7138 -823 5 1337 703 161 16 31 chrX 98663849 98663977 -67986319 + B1_Mur4 SINE Alu 25 150 0 5 1337 532 188 79 79 chrX 98664035 98664169 -67986127 + B1_Mur2 SINE Alu 1 135 -14 5 1337 237 65 0 0 chrX 98664169 98664200 -67986096 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 5 1337 213 205 22 43 chrX 98664213 98664259 -67986037 + Alu_5 SINE Alu 10 54 -121 5 1337 224 243 200 0 chrX 98664247 98664317 -67985979 - PB1D10 SINE Alu -32 85 2 5 1337 195 69 0 0 chrX 98664567 98664596 -67985700 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1337 205 330 51 41 chrX 98664609 98664707 -67985589 + MIRb SINE MIR 168 266 -2 5 1337 24 0 0 0 chrX 98664732 98664756 -67985540 + AT_rich Low_complexity Low_complexity 1 24 0 5 1337 215 260 15 34 chrX 98664770 98664854 -67985442 + L2a LINE L2 3340 3424 -2 5 1337 278 174 67 6 chrX 98664905 98664973 -67985323 + PB1 SINE Alu 23 100 -17 5 1337 857 145 0 8 chrX 98664980 98665112 -67985184 + B1_Mur1 SINE Alu 18 148 -1 5 1337 525 300 7 14 chrX 98665297 98665439 -67984857 - RSINE1 SINE B4 -24 141 1 5 1337 683 133 99 23 chrX 98665524 98665655 -67984641 - B1_Mur3 SINE Alu 0 149 9 5 1337 4379 98 33 45 chrX 98665683 98666374 -67983922 - Lx4B LINE L1 -4 7054 6372 5 1337 795 82 7 141 chrX 98666426 98666568 -67983728 - Lx4B LINE L1 -673 6385 6263 5 1337 844 159 7 28 chrX 98666685 98666827 -67983469 - B1_Mur3 SINE Alu -9 140 2 5 1337 998 224 28 9 chrX 98666869 98667081 -67983215 - B3 SINE B2 0 216 1 5 1337 229 297 15 59 chrX 98667090 98667158 -67983138 - ID4_ SINE ID -17 66 2 5 1337 516 225 0 193 chrX 98667202 98667373 -67982923 + B1_Mur2 SINE Alu 12 149 0 5 1337 549 176 32 48 chrX 98667622 98667747 -67982549 - B3 SINE B2 -14 202 80 5 1337 1306 86 27 5 chrX 98667940 98668128 -67982168 - B2_Mm2 SINE B2 -1 194 3 5 1337 258 228 145 48 chrX 98668293 98668376 -67981920 - B1F2 SINE Alu -54 95 5 5 1337 767 196 191 0 chrX 98668427 98668616 -67981680 + URR1B DNA MER1_type 1 225 0 5 1337 1166 37 0 0 chrX 98668620 98668754 -67981542 + B1_Mus1 SINE Alu 2 135 -13 5 1337 408 211 26 0 chrX 98668876 98668952 -67981344 - ID4_ SINE ID -3 80 3 5 1337 254 312 70 0 chrX 98669103 98669231 -67981065 - L1MC LINE L1 -2038 5844 5708 5 1337 803 179 27 7 chrX 98669245 98669378 -67980918 + B1_Mur3 SINE Alu 1 137 -12 5 1337 378 42 0 0 chrX 98669378 98669426 -67980870 + (GAAA)n Simple_repeat Simple_repeat 1 48 0 5 1337 803 179 27 7 chrX 98669426 98669438 -67980858 + B1_Mur3 SINE Alu 138 149 0 5 1337 789 209 132 26 chrX 98669447 98669712 -67980584 - Lx7 LINE L1 -200 7496 7204 5 1337 640 258 167 9 chrX 98669712 98669939 -67980357 + MTD LTR MaLR 157 419 0 5 1337 198 0 0 0 chrX 98670163 98670185 -67980111 + (TTA)n Simple_repeat Simple_repeat 2 23 0 5 1337 1268 27 0 0 chrX 98670192 98670339 -67979957 - B1_Mm SINE Alu 0 147 1 5 1337 414 319 67 12 chrX 98670392 98670557 -67979739 + B3A SINE B2 5 178 -20 5 1337 1046 122 92 6 chrX 98670573 98670746 -67979550 - B2_Mm2 SINE B2 -7 188 1 5 1337 507 235 90 8 chrX 98670827 98670960 -67979336 - B1F1 SINE Alu -2 147 4 5 1337 207 0 0 0 chrX 98671281 98671304 -67978992 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 1337 349 313 161 33 chrX 98671408 98671798 -67978498 + MLT1L LTR MaLR 146 585 -25 5 1337 528 147 263 17 chrX 98671833 98671951 -67978345 - B1_Mur3 SINE Alu -1 148 2 5 1337 246 169 167 12 chrX 98672100 98672184 -67978112 - Lx8 LINE L1 -2 7471 7375 5 1337 566 271 101 69 chrX 98672254 98672439 -67977857 - Lx8 LINE L1 -248 7225 7026 5 1337 3306 95 4 37 chrX 98672439 98672930 -67977366 - MT2C_Mm LTR ERVL 0 475 1 5 1337 566 271 101 69 chrX 98672930 98673021 -67977275 - Lx8 LINE L1 -448 7025 6941 5 1337 2398 73 31 9 chrX 98673267 98673587 -67976709 - ORR1A2 LTR MaLR 0 327 1 5 1337 878 88 0 0 chrX 98673755 98673880 -67976416 + B1_Mm SINE Alu 1 125 -22 5 1337 1005 48 48 0 chrX 98674077 98674203 -67976093 + B1_Mus2 SINE Alu 1 132 -15 5 1337 468 294 0 18 chrX 98674205 98674316 -67975980 + B1_Mur1 SINE Alu 2 110 -39 5 1337 860 142 0 66 chrX 98674345 98674496 -67975800 + B1_Mur2 SINE Alu 3 143 -6 5 1337 207 0 0 0 chrX 98674999 98675022 -67975274 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1337 296 175 47 16 chrX 98675134 98675198 -67975098 - PB1D9 SINE Alu -50 70 5 5 1337 425 226 36 82 chrX 98675304 98675423 -67974873 - L1MA6 LINE L1 -393 5907 5819 5 1337 627 261 6 65 chrX 98675423 98675591 -67974705 - RSINE1 SINE B4 -6 159 2 5 1337 464 232 0 44 chrX 98675591 98675724 -67974572 - L1MA5 LINE L1 -478 5822 5701 5 1337 289 254 178 34 chrX 98675720 98675928 -67974368 + L1MA5 LINE L1 5901 6138 -162 5 1337 274 250 34 59 chrX 98676023 98676142 -67974154 - L1M4 LINE L1 -1368 4778 4663 5 1337 987 160 112 0 chrX 98676198 98676385 -67973911 + MTC LTR MaLR 1 208 -213 5 1337 1130 95 0 0 chrX 98676388 98676535 -67973761 + B1_Mus1 SINE Alu 2 148 0 5 1337 945 157 279 12 chrX 98676932 98677190 -67973106 - RLTR25B LTR ERVK -255 773 447 5 1337 304 171 13 79 chrX 98677203 98677279 -67973017 - RLTR25B LTR ERVK -957 71 1 5 1337 308 274 32 0 chrX 98677324 98677419 -67972877 - B3 SINE B2 -8 208 111 5 1337 883 200 0 0 chrX 98677482 98677632 -67972664 + B1_Mur4 SINE Alu 1 150 0 5 1337 613 310 22 36 chrX 98677686 98677910 -67972386 + B4A SINE B4 72 292 0 5 1337 463 209 9 37 chrX 98677979 98678088 -67972208 + PB1D7 SINE Alu 14 119 -1 6 1337 319 281 0 24 chrX 98678108 98678192 -67972104 + RSINE1 SINE B4 1 82 -83 6 1337 321 89 0 0 chrX 98678254 98678299 -67971997 + (CATA)n Simple_repeat Simple_repeat 1 45 0 6 1337 1374 59 42 26 chrX 98678342 98678534 -67971762 + B2_Mm2 SINE B2 1 195 0 6 1337 269 194 224 0 chrX 98678629 98678696 -67971600 - ID4_ SINE ID -1 82 1 6 1337 1186 74 0 0 chrX 98678721 98678869 -67971427 + B1_Mus1 SINE Alu 1 148 0 6 1337 261 0 0 0 chrX 98678869 98678898 -67971398 + (A)n Simple_repeat Simple_repeat 1 29 0 6 1337 189 0 0 0 chrX 98678898 98678919 -67971377 + (GA)n Simple_repeat Simple_repeat 2 22 0 6 1337 506 272 50 71 chrX 98679034 98679305 -67970991 - RLTR12B LTR ERVK -248 279 41 6 1337 220 237 79 63 chrX 98679345 98679408 -67970888 - PB1 SINE Alu -54 73 10 6 1337 940 202 28 24 chrX 98679475 98679688 -67970608 - B3 SINE B2 0 216 3 6 1337 267 203 0 0 chrX 98679705 98679764 -67970532 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 6 1337 993 59 170 0 chrX 98679769 98679922 -67970374 + RLTR19 LTR ERVK 1 179 -320 6 1337 1029 74 0 7 chrX 98679923 98680072 -67970224 - B2_Mm2 SINE B2 -9 186 39 6 1337 1232 48 0 0 chrX 98680104 98680249 -67970047 - B1_Mus2 SINE Alu 0 147 3 6 1337 421 292 117 0 chrX 98680325 98680454 -67969842 - B4A SINE B4 -37 255 111 6 1337 266 60 25 11 chrX 98680454 98680507 -67969789 + B1_Mus1 SINE Alu 4 56 -92 6 1337 283 204 0 0 chrX 98680505 98680554 -67969742 - B3A SINE B2 -122 76 28 6 1337 469 171 8 146 chrX 98680572 98680702 -67969594 - PB1D9 SINE Alu 0 120 9 6 1337 810 117 0 0 chrX 98680790 98680910 -67969386 + B1_Mur2 SINE Alu 25 144 -5 6 1337 1360 90 16 11 chrX 98680964 98681154 -67969142 - B2_Mm2 SINE B2 -3 192 2 6 1337 480 267 67 0 chrX 98681158 98681293 -67969003 - B3 SINE B2 0 216 73 6 1337 252 284 98 27 chrX 98681385 98681497 -67968799 - PB1 SINE Alu -7 120 1 6 1337 552 267 0 8 chrX 98681546 98681667 -67968629 + RSINE1 SINE B4 3 122 -43 6 1337 316 329 47 14 chrX 98681888 98682036 -67968260 - LTR33A_ LTR ERVL -266 265 113 6 1337 1693 21 5 0 chrX 98682177 98682368 -67967928 + B2_Mm1a SINE B2 2 193 0 6 1337 1114 63 35 0 chrX 98682465 98682607 -67967689 - B1_Mus2 SINE Alu 0 147 1 6 1337 350 265 0 0 chrX 98682691 98682774 -67967522 + B1F SINE Alu 65 147 -2 6 1337 1385 70 16 16 chrX 98682781 98682971 -67967325 + B2_Mm2 SINE B2 1 190 -5 6 1337 517 237 22 58 chrX 98683016 98683155 -67967141 + B3 SINE B2 5 138 -78 6 1337 760 237 7 0 chrX 98683182 98683321 -67966975 - B1_Mur2 SINE Alu -8 141 2 6 1337 374 220 21 32 chrX 98683321 98683415 -67966881 + B3 SINE B2 120 212 -4 6 1337 1243 48 0 0 chrX 98683446 98683591 -67966705 + B1_Mus2 SINE Alu 2 146 -1 6 1337 502 188 16 93 chrX 98683611 98683740 -67966556 + PB1D9 SINE Alu 1 119 -1 6 1337 715 194 42 35 chrX 98683789 98683933 -67966363 + B3 SINE B2 1 145 -71 6 1337 450 167 110 64 chrX 98683952 98684061 -67966235 + PB1D9 SINE Alu 6 119 -1 6 1337 730 235 59 20 chrX 98684060 98684264 -67966032 + ID_B1 SINE B4 11 222 -2 6 1337 229 283 171 13 chrX 98684657 98684805 -67965491 - L1M4b LINE L1 -5256 1610 1438 6 1337 1154 68 0 0 chrX 98684805 98684952 -67965344 - B1_Mus2 SINE Alu 0 147 1 6 1337 263 283 171 13 chrX 98684952 98685118 -67965178 - L1M4b LINE L1 -5429 1437 1219 6 1337 1429 70 0 21 chrX 98685119 98685308 -67964988 - B2_Mm2 SINE B2 -9 186 2 6 1337 24 0 0 0 chrX 98685317 98685341 -67964955 + AT_rich Low_complexity Low_complexity 1 24 0 6 1337 326 302 84 32 chrX 98685359 98685513 -67964783 - RSINE1 SINE B4 -1 164 3 6 1337 1201 55 0 0 chrX 98685555 98685700 -67964596 - B1_Mus1 SINE Alu -2 146 2 6 1337 1132 89 0 7 chrX 98685766 98685913 -67964383 - B1_Mus2 SINE Alu 0 147 2 6 1337 1663 11 16 0 chrX 98686058 98686243 -67964053 + B2_Mm1a SINE B2 1 188 -5 6 1337 2105 158 104 5 chrX 98686244 98686627 -67963669 + MTC LTR MaLR 1 421 0 6 1337 1099 76 7 0 chrX 98686648 98686792 -67963504 + B1_Mm SINE Alu 3 147 0 6 1337 213 119 0 0 chrX 98686795 98686837 -67963459 + (A)n Simple_repeat Simple_repeat 1 42 0 6 1337 24 0 0 0 chrX 98686982 98687006 -67963290 + AT_rich Low_complexity Low_complexity 1 24 0 6 1337 384 247 0 0 chrX 98687037 98687118 -67963178 - B3 SINE B2 -86 130 50 6 1337 919 113 0 14 chrX 98687148 98687291 -67963005 - B1_Mur4 SINE Alu -7 143 3 6 1337 35 34 0 17 chrX 98687313 98687361 -67962935 + AT_rich Low_complexity Low_complexity 1 48 0 6 1337 1572 48 11 0 chrX 98687361 98687548 -67962748 - B2_Mm1t SINE B2 -3 190 2 6 1337 35 34 0 17 chrX 98687548 98687559 -67962737 + AT_rich Low_complexity Low_complexity 1 11 0 6 1337 799 253 21 31 chrX 98687565 98687757 -67962539 + B3A SINE B2 4 193 -5 6 1337 665 237 12 25 chrX 98687796 98687956 -67962340 - B3 SINE B2 -57 159 2 6 1337 23 0 0 0 chrX 98687956 98687979 -67962317 + AT_rich Low_complexity Low_complexity 1 23 0 6 1337 259 210 206 110 chrX 98688161 98688316 -67961980 + RLTR23 LTR ERV1 239 408 -22 6 1337 1411 81 16 0 chrX 98688352 98688537 -67961759 - B2_Mm2 SINE B2 -7 188 1 6 1337 696 229 21 0 chrX 98688620 98688760 -67961536 + B1_Mus1 SINE Alu 4 146 -2 6 1337 464 100 12 0 chrX 98688789 98688869 -67961427 + (TA)n Simple_repeat Simple_repeat 2 82 0 6 1337 1157 54 0 33 chrX 98688934 98689087 -67961209 - B1_Mus1 SINE Alu 0 148 1 6 1337 543 265 127 48 chrX 98689103 98689282 -67961014 - Lx9 LINE L1 -1424 6220 6013 6 1337 1145 55 14 0 chrX 98689282 98689428 -67960868 - B1_Mus1 SINE Alu 0 148 1 6 1337 543 238 73 70 chrX 98689428 98689663 -67960633 - Lx9 LINE L1 -1632 6012 5781 6 1337 26 0 0 0 chrX 98689663 98689689 -67960607 + AT_rich Low_complexity Low_complexity 1 26 0 6 1337 1696 31 0 0 chrX 98689717 98689908 -67960388 - B2_Mm1t SINE B2 -2 191 1 6 1337 275 76 423 22 chrX 98689909 98690001 -67960295 - B2_Mm2 SINE B2 -20 175 47 6 1337 1200 89 60 0 chrX 98690048 98690216 -67960080 - B2_Mm1t SINE B2 -14 179 2 6 1337 1587 43 5 0 chrX 98690221 98690408 -67959888 - B2_Mm1a SINE B2 -5 188 1 6 1337 1360 196 21 21 chrX 98690423 98690705 -67959591 - Lx9 LINE L1 -135 5712 5431 6 1337 17396 18 0 0 chrX 98690699 98693361 -67956935 - L1Md_A LINE L1 -1 6581 3920 6 1337 762 200 38 210 chrX 98693356 98693440 -67956856 - L1_Rod LINE L1 -324 5523 5437 6 1337 1391 87 16 0 chrX 98693440 98693625 -67956671 - B2_Mm2 SINE B2 -7 188 1 6 1337 762 200 38 210 chrX 98693625 98693736 -67956560 - L1_Rod LINE L1 -411 5436 5330 6 1337 333 0 0 0 chrX 98693736 98693773 -67956523 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 6 1337 1148 44 0 0 chrX 98693773 98693910 -67956386 - B1_Mus2 SINE Alu -10 137 1 6 1337 762 200 38 210 chrX 98693910 98693990 -67956306 - L1_Rod LINE L1 -518 5329 5269 6 1337 924 167 189 0 chrX 98693990 98694170 -67956126 - B3 SINE B2 0 216 3 6 1337 762 200 38 210 chrX 98694170 98694183 -67956113 - L1_Rod LINE L1 -579 5268 5268 6 1337 1420 71 16 11 chrX 98694183 98694369 -67955927 - B2_Mm2 SINE B2 -8 187 1 6 1337 762 200 38 210 chrX 98694369 98694469 -67955827 - L1_Rod LINE L1 -579 5268 5206 6 1337 1097 73 0 0 chrX 98694469 98694605 -67955691 - B1_Mus2 SINE Alu -11 136 1 6 1337 762 200 38 210 chrX 98694605 98694654 -67955642 - L1_Rod LINE L1 -642 5205 5158 6 1337 3326 267 76 61 chrX 98694653 98695494 -67954802 + Lx9 LINE L1 6400 7271 -373 6 1337 1166 50 0 0 chrX 98695494 98695633 -67954663 + B1_Mus2 SINE Alu 1 139 -8 6 1337 3326 267 76 61 chrX 98695633 98695888 -67954408 + Lx9 LINE L1 7272 7532 -112 6 1337 1178 55 0 20 chrX 98695888 98696037 -67954259 + B1_Mus2 SINE Alu 1 146 -1 6 1337 3326 267 76 61 chrX 98696037 98696158 -67954138 + Lx9 LINE L1 7533 7638 -6 6 1337 1102 67 0 0 chrX 98696158 98696292 -67954004 + B1_Mm SINE Alu 1 134 -13 6 1337 285 29 0 0 chrX 98696292 98696326 -67953970 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 6 1337 1320 87 44 0 chrX 98696339 98696522 -67953774 + B2_Mm2 SINE B2 2 192 -3 6 1337 1157 68 7 0 chrX 98696556 98696702 -67953594 + B1_Mus1 SINE Alu 2 148 0 6 1337 1339 99 16 0 chrX 98696728 98696919 -67953377 + B2_Mm2 SINE B2 1 194 -1 6 1337 480 162 26 71 chrX 98696943 98697056 -67953240 - PB1D10 SINE Alu -5 112 5 6 167 1178 55 0 7 chrX 98697127 98697273 -67953023 - B1_Mus2 SINE Alu -2 145 1 6 1338 232 329 37 0 chrX 98697276 98697358 -67952938 - B1F1 SINE Alu -51 98 14 6 1338 265 204 0 0 chrX 98697457 98697506 -67952790 + RSINE1 SINE B4 69 117 -48 6 1338 600 53 0 0 chrX 98697561 98697637 -67952659 + (GGAA)n Simple_repeat Simple_repeat 2 77 0 6 1338 3481 85 44 10 chrX 98697643 98698141 -67952155 + Lx LINE L1 6134 6648 -6 6 1338 215 103 26 0 chrX 98698146 98698185 -67952111 + (GGAAA)n Simple_repeat Simple_repeat 3 42 0 6 1338 1076 114 84 0 chrX 98698193 98698360 -67951936 + B2_Mm2 SINE B2 1 181 -14 6 1338 344 242 21 21 chrX 98698405 98698498 -67951798 + ID_B1 SINE B4 119 211 -13 6 1338 414 0 0 0 chrX 98698498 98698544 -67951752 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 6 1338 744 119 8 8 chrX 98698793 98698912 -67951384 - B1_Mur4 SINE Alu -6 144 26 6 1338 1268 119 10 40 chrX 98698920 98699121 -67951175 - B2_Mm2 SINE B2 0 195 1 6 1338 2694 169 43 10 chrX 98699151 98699664 -67950632 + Lx4B LINE L1 6512 7041 -17 6 1338 33 0 0 23 chrX 98699664 98699680 -67950616 + AT_rich Low_complexity Low_complexity 1 16 0 6 1338 1355 31 75 0 chrX 98699680 98699841 -67950455 - B2_Mm1t SINE B2 -19 174 2 6 1338 33 0 0 23 chrX 98699841 98699868 -67950428 + AT_rich Low_complexity Low_complexity 1 27 0 7 1338 1178 94 0 6 chrX 98699879 98700050 -67950246 + B2_Mm2 SINE B2 1 170 -25 7 1338 500 200 64 78 chrX 98700096 98700237 -67950059 - B2_Mm1t SINE B2 -4 189 51 7 1338 215 114 23 0 chrX 98700378 98700422 -67949874 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1338 284 200 0 32 chrX 98700481 98700543 -67949753 + B3A SINE B2 51 110 -88 7 1338 262 98 230 32 chrX 98700606 98700704 -67949592 - B2_Mm2 SINE B2 0 193 64 7 1338 437 248 7 136 chrX 98700739 98700879 -67949417 - B3 SINE B2 -89 127 6 7 1338 396 0 0 0 chrX 98700890 98700934 -67949362 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 7 1338 2063 267 72 5 chrX 98700942 98701718 -67948578 + Lx5 LINE L1 6454 7032 -18 7 1338 1362 55 43 22 chrX 98701881 98702065 -67948231 - B2_Mm2 SINE B2 -7 188 1 7 1338 1176 61 0 7 chrX 98702163 98702311 -67947985 - B1_Mus2 SINE Alu 0 147 1 7 1338 269 253 92 13 chrX 98702336 98702412 -67947884 - B1F1 SINE Alu -1 148 67 7 1338 598 280 65 33 chrX 98702438 98702451 -67947845 - ID_B1 SINE B4 -2 222 214 7 1338 261 0 0 0 chrX 98702451 98702480 -67947816 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 7 1338 598 280 65 33 chrX 98702480 98702680 -67947616 - ID_B1 SINE B4 -11 213 2 7 1338 309 179 35 26 chrX 98702734 98702849 -67947447 + CT-rich Low_complexity Low_complexity 3 118 0 7 1338 412 274 18 0 chrX 98702858 98702971 -67947325 - ID_B1 SINE B4 -8 216 102 7 1338 22 0 0 0 chrX 98702992 98703014 -67947282 + AT_rich Low_complexity Low_complexity 1 22 0 7 1338 658 154 146 0 chrX 98703081 98703211 -67947085 - B1_Mur2 SINE Alu 0 149 1 7 1338 1040 261 112 69 chrX 98703278 98703549 -67946747 - RLTR17 LTR ERVK -74 618 320 7 1338 275 0 0 28 chrX 98703549 98703585 -67946711 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 7 1338 1157 62 7 0 chrX 98703591 98703735 -67946561 - B1_Mus2 SINE Alu -1 146 2 7 1338 351 60 0 0 chrX 98703739 98703789 -67946507 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 7 1338 1040 261 112 69 chrX 98703789 98703998 -67946298 - RLTR17 LTR ERVK -373 319 105 7 1338 2377 118 46 8 chrX 98704144 98704512 -67945784 + RLTR14 LTR ERV1 1 382 0 7 1338 1525 186 96 11 chrX 98704702 98705067 -67945229 + Lx9 LINE L1 7247 7642 -2 7 1338 1164 64 0 0 chrX 98705094 98705251 -67945045 + B2_Mm2 SINE B2 1 157 -38 7 1338 416 35 0 17 chrX 98705251 98705310 -67944986 + (TAAA)n Simple_repeat Simple_repeat 3 60 0 7 1338 659 191 11 174 chrX 98705317 98705431 -67944865 + B1_Mur4 SINE Alu 2 103 -47 7 1338 183 42 0 0 chrX 98705431 98705455 -67944841 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 7 1338 1405 68 0 6 chrX 98705459 98705636 -67944660 - B2_Mm2 SINE B2 -19 176 1 7 1338 1597 98 0 13 chrX 98705638 98705875 -67944421 - L1_Mus4 LINE L1 -2 6634 6401 7 1338 659 191 11 174 chrX 98705875 98705930 -67944366 + B1_Mur4 SINE Alu 104 150 0 7 1338 294 270 167 9 chrX 98705933 98706151 -67944145 + L1M5 LINE L1 5078 5332 -814 7 1338 1012 60 105 7 chrX 98706261 98706413 -67943883 - B2_Mm2 SINE B2 -28 167 1 7 1338 608 197 47 0 chrX 98706414 98706541 -67943755 + B1_Mm SINE Alu 12 144 -3 7 1338 666 185 0 25 chrX 98706589 98706711 -67943585 + PB1D9 SINE Alu 2 120 0 7 1338 767 282 14 5 chrX 98706743 98706953 -67943343 + B3 SINE B2 1 212 -4 7 1338 409 329 20 7 chrX 98707014 98707161 -67943135 + B1F2 SINE Alu 1 149 0 7 1338 595 226 17 0 chrX 98707181 98707296 -67943000 + PB1D7 SINE Alu 4 120 0 7 1338 530 301 48 9 chrX 98707298 98707529 -67942767 + L1M5 LINE L1 5320 5559 -885 7 1338 4997 64 24 0 chrX 98707773 98708399 -67941897 + L1Md_F2 LINE L1 5923 6563 -19 7 1338 4149 74 0 6 chrX 98708409 98708939 -67941357 - L1_Mm LINE L1 -66 5817 5291 7 1338 1200 68 0 0 chrX 98708939 98709086 -67941210 - B1_Mus2 SINE Alu 0 147 1 7 1338 459 0 0 0 chrX 98709103 98709154 -67941142 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 7 1338 1249 59 0 0 chrX 98709154 98709313 -67940983 - B2_Mm1a SINE B2 -32 161 3 7 1338 1205 104 0 0 chrX 98709313 98709486 -67940810 - L1_Mm LINE L1 -582 5301 5129 7 1338 1107 66 0 44 chrX 98709489 98709631 -67940665 + L1_Mus1 LINE L1 6417 6558 -9 7 1338 1182 49 14 0 chrX 98709631 98709775 -67940521 + B1_Mus2 SINE Alu 1 146 -1 7 1338 1107 66 0 44 chrX 98709775 98709790 -67940506 + L1_Mus1 LINE L1 6559 6567 0 7 1338 446 285 28 93 chrX 98709790 98709972 -67940324 + B3A SINE B2 29 198 0 7 1338 1223 98 11 22 chrX 98710076 98710254 -67940042 + B2_Mm1t SINE B2 1 176 -17 7 1338 618 82 0 0 chrX 98710255 98710340 -67939956 + (GGA)n Simple_repeat Simple_repeat 3 87 0 7 1338 220 273 19 57 chrX 98710340 98710445 -67939851 + B3A SINE B2 89 189 -9 7 1338 326 222 80 44 chrX 98710498 98710611 -67939685 + PB1D10 SINE Alu 1 117 0 7 1338 235 318 15 0 chrX 98710857 98710923 -67939373 + ID4_ SINE ID 1 67 -16 7 1338 1217 41 0 7 chrX 98710961 98711109 -67939187 + B1_Mus2 SINE Alu 1 147 0 7 1338 919 152 7 0 chrX 98711438 98711583 -67938713 + B1_Mus2 SINE Alu 2 147 0 7 1338 261 247 201 46 chrX 98711619 98711793 -67938503 + L1MB8 LINE L1 5867 6067 -111 7 1338 1234 121 21 10 chrX 98711805 98711998 -67938298 - B2_Mm2 SINE B2 0 195 1 7 1338 854 249 33 5 chrX 98712004 98712214 -67938082 - B3 SINE B2 0 216 1 7 1338 481 265 0 17 chrX 98712229 98712348 -67937948 - B1_Mur1 SINE Alu -5 144 28 7 1338 23 0 0 0 chrX 98712364 98712387 -67937909 + AT_rich Low_complexity Low_complexity 1 23 0 7 1338 183 80 0 0 chrX 98712491 98712516 -67937780 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 1338 180 0 0 0 chrX 98712528 98712548 -67937748 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 7 1338 551 213 54 16 chrX 98712568 98712697 -67937599 - B1_Mur1 SINE Alu -10 139 6 7 1338 285 275 0 0 chrX 98712788 98712857 -67937439 + ID4 SINE ID 15 83 0 7 1338 1200 62 0 0 chrX 98713036 98713181 -67937115 + B1_Mus2 SINE Alu 3 147 0 7 1338 199 87 21 42 chrX 98713286 98713334 -67936962 + (CAAAAA)n Simple_repeat Simple_repeat 3 49 0 7 1338 998 83 198 0 chrX 98713508 98713665 -67936631 + B2_Mm2 SINE B2 1 188 -7 7 1338 1417 62 39 0 chrX 98713674 98713853 -67936443 + B2_Mm2 SINE B2 2 187 -8 7 1338 1484 60 16 0 chrX 98716487 98716670 -67933626 + B2_Mm2 SINE B2 2 187 -8 7 1338 485 255 28 25 chrX 98716692 98716845 -67933451 - B3A SINE B2 -2 196 40 7 1338 1179 55 7 0 chrX 98716983 98717128 -67933168 - B1_Mm SINE Alu 0 147 2 7 1338 243 0 0 0 chrX 98717137 98717164 -67933132 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 7 1338 1461 51 6 0 chrX 98717164 98717340 -67932956 - B2_Mm1a SINE B2 -15 178 2 7 1338 1048 102 0 20 chrX 98717355 98717505 -67932791 - B1_Mus1 SINE Alu -1 147 1 7 1338 433 204 96 22 chrX 98717505 98717640 -67932656 + RLTR16 LTR ERVK 34 178 -327 7 1338 304 268 75 101 chrX 98718019 98718218 -67932078 + RMER3D-int LTR ERVK 10 203 -2639 7 1338 823 188 137 79 chrX 98718203 98718365 -67931931 + RMER3D-int LTR ERVK 1085 1279 -1563 7 1338 1061 131 103 0 chrX 98718365 98718540 -67931756 - B2_Mm2 SINE B2 -2 193 1 7 1338 823 188 137 79 chrX 98718540 98718655 -67931641 + RMER3D-int LTR ERVK 1280 1378 -1464 7 1338 1150 62 7 0 chrX 98718706 98718852 -67931444 - B1_Mus1 SINE Alu -1 147 1 7 1338 1079 51 65 0 chrX 98718932 98719070 -67931226 + B1_Mus2 SINE Alu 1 147 0 7 1338 3312 195 143 149 chrX 98719080 98719401 -67930895 + MYSERV16_I-int LTR ERVK 352 727 -1599 7 1338 1247 41 0 0 chrX 98719401 98719548 -67930748 - B1_Mus2 SINE Alu 0 147 1 7 1338 3312 195 143 149 chrX 98719548 98719716 -67930580 + MYSERV16_I-int LTR ERVK 728 877 -1449 7 1338 1152 76 0 0 chrX 98719716 98719861 -67930435 - B1_Mus2 SINE Alu -2 145 1 7 1338 3312 195 143 149 chrX 98719861 98720870 -67929426 + MYSERV16_I-int LTR ERVK 878 1842 -484 7 1338 320 214 0 0 chrX 98720870 98720926 -67929370 - B2_Mm2 SINE B2 -139 56 1 7 1338 324 70 0 0 chrX 98721037 98721080 -67929216 + (T)n Simple_repeat Simple_repeat 1 43 0 7 1338 1248 48 0 0 chrX 98721080 98721227 -67929069 - B1_Mus2 SINE Alu 0 147 1 7 1338 595 261 45 7 chrX 98721376 98721530 -67928766 - B3 SINE B2 0 216 57 7 1338 592 152 79 8 chrX 98721563 98721689 -67928607 - ORR1E LTR MaLR -206 153 19 7 1338 940 189 26 26 chrX 98721717 98721912 -67928384 + B3 SINE B2 21 215 -1 7 1338 550 223 51 9 chrX 98721987 98722130 -67928166 - ID_B1 SINE B4 -39 253 94 7 1338 225 94 0 0 chrX 98722143 98722175 -67928121 + (TTA)n Simple_repeat Simple_repeat 3 34 0 7 1338 405 227 68 0 chrX 98722184 98722272 -67928024 - PB1D10 SINE Alu -21 96 3 7 1338 213 310 69 14 chrX 98722218 98722290 -67928006 - B4A SINE B4 -146 146 71 7 1338 261 298 86 9 chrX 98722378 98722483 -67927813 - B2_Mm2 SINE B2 -69 126 14 7 1338 815 281 35 0 chrX 98722484 98722687 -67927609 - ID_B1 SINE B4 -11 213 4 7 1338 602 97 21 0 chrX 98722744 98722835 -67927461 - B1_Mus2 SINE Alu -1 146 54 7 1338 2268 167 22 26 chrX 98722835 98723291 -67927005 + RLTR31_Mm LTR ERVK 1 454 -107 7 1338 1100 56 21 14 chrX 98723345 98723490 -67926806 - B1_Mus1 SINE Alu 0 148 3 7 1338 335 267 0 0 chrX 98723520 98723580 -67926716 - B1_Mur4 SINE Alu -89 61 2 7 1338 264 181 19 0 chrX 98723761 98723821 -67926475 + B1_Mus2 SINE Alu 85 145 -2 7 1338 1206 68 0 0 chrX 98723979 98724126 -67926170 - B1_Mm SINE Alu 0 147 1 7 1338 715 207 42 14 chrX 98724139 98724281 -67926015 - B3A SINE B2 -52 146 1 7 1338 301 214 53 67 chrX 98724368 98724443 -67925853 - ID4_ SINE ID -9 74 1 7 1338 297 210 184 29 chrX 98724471 98724574 -67925722 + PB1D9 SINE Alu 2 120 0 7 1338 1137 50 0 0 chrX 98724576 98724715 -67925581 + B1_Mus2 SINE Alu 1 139 -8 8 1338 461 223 100 7 chrX 98724743 98724856 -67925440 + B1_Mus2 SINE Alu 1 117 0 8 1338 703 289 22 66 chrX 98724876 98725102 -67925194 + B3 SINE B2 1 216 0 8 1338 463 258 299 0 chrX 98725132 98725299 -67924997 + ID_B1 SINE B4 1 217 -7 8 1338 321 312 119 0 chrX 98725334 98725443 -67924853 + PB1 SINE Alu 3 124 -3 8 1338 264 290 29 0 chrX 98725457 98725526 -67924770 + ID4 SINE ID 12 82 -1 8 1338 636 206 189 55 chrX 98725533 98725697 -67924599 + B3 SINE B2 1 186 -30 8 1338 225 346 65 37 chrX 98725766 98725874 -67924422 + B3 SINE B2 78 188 -28 8 1338 871 245 13 70 chrX 98725945 98726173 -67924123 + B3 SINE B2 1 215 -1 8 1338 378 219 48 12 chrX 98726229 98726312 -67923984 + B3 SINE B2 39 124 -92 8 1338 838 37 0 35 chrX 98726362 98726475 -67923821 + B1_Mm SINE Alu 9 117 -30 8 1338 253 282 154 88 chrX 98726492 98726628 -67923668 + B3A SINE B2 54 198 0 8 1338 244 333 62 36 chrX 98726692 98726804 -67923492 + PB1D10 SINE Alu 3 117 0 8 1338 247 203 229 14 chrX 98727042 98727112 -67923184 - B1_Mur1 SINE Alu -5 144 60 8 1338 249 33 0 0 chrX 98727115 98727145 -67923151 + (T)n Simple_repeat Simple_repeat 1 30 0 8 1338 1213 54 0 0 chrX 98727145 98727293 -67923003 - B1_Mus1 SINE Alu 0 148 1 8 1338 546 143 0 0 chrX 98727499 98727590 -67922706 + (TA)n Simple_repeat Simple_repeat 1 91 0 8 1338 558 280 14 0 chrX 98729231 98729374 -67920922 - B1_Mur1 SINE Alu -2 147 3 8 1338 303 267 0 96 chrX 98729852 98729935 -67920361 - B1_Mus2 SINE Alu -72 75 1 8 1338 255 283 0 109 chrX 98729939 98729961 -67920335 - PB1D10 SINE Alu 0 117 12 8 1338 344 290 0 41 chrX 98729961 98730058 -67920238 - ID_B1 SINE B4 -39 185 93 8 1338 1447 50 5 27 chrX 98730068 98730254 -67920042 - B2_Mm1a SINE B2 -9 184 3 8 1338 219 69 0 0 chrX 98730769 98730798 -67919498 + (T)n Simple_repeat Simple_repeat 1 29 0 8 1338 1522 38 11 5 chrX 98730805 98730991 -67919305 - B2_Mm1t SINE B2 -6 187 1 8 1338 216 67 0 0 chrX 98731008 98731038 -67919258 + (TTCTG)n Simple_repeat Simple_repeat 2 31 0 8 1338 1121 88 0 0 chrX 98731038 98731185 -67919111 - B1_Mus1 SINE Alu -1 147 1 8 1338 557 260 55 0 chrX 98731574 98731701 -67918595 + ID_B1 SINE B4 86 219 -5 8 1338 1099 69 7 0 chrX 98732416 98732561 -67917735 + B1_Mus1 SINE Alu 3 148 0 8 1338 1035 149 16 11 chrX 98732662 98732845 -67917451 - B2_Mm2 SINE B2 -9 186 3 8 1338 996 154 6 12 chrX 98732889 98733060 -67917236 + ORR1C2 LTR MaLR 1 170 -214 8 1338 231 346 0 71 chrX 98733009 98733093 -67917203 - ID_B1 SINE B4 -53 171 94 8 1338 426 277 83 8 chrX 98733159 98733279 -67917017 + ID_B1 SINE B4 88 216 -8 8 1338 738 258 46 0 chrX 98733308 98733459 -67916837 + RSINE1 SINE B4 2 159 -6 8 1338 428 233 115 174 chrX 98733495 98733668 -67916628 + B3 SINE B2 1 170 -46 8 1338 1066 84 14 7 chrX 98733668 98733811 -67916485 + B1_Mur4 SINE Alu 5 148 -2 8 1338 428 233 115 174 chrX 98733811 98733855 -67916441 + B3 SINE B2 171 205 -11 8 1338 458 210 0 58 chrX 98733902 98733988 -67916308 + B3 SINE B2 1 81 -135 8 1338 654 168 19 0 chrX 98734013 98734120 -67916176 - PB1D9 SINE Alu 0 120 12 8 1338 207 88 0 0 chrX 98734159 98734193 -67916103 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 8 1338 687 12 0 23 chrX 98734193 98734271 -67916025 - B1_Mm SINE Alu -8 139 62 8 1338 862 163 170 22 chrX 98734634 98734816 -67915480 + B3 SINE B2 2 210 -6 8 1338 495 272 29 7 chrX 98735011 98735148 -67915148 - B1F SINE Alu -5 144 5 8 1338 730 222 28 0 chrX 98735447 98735591 -67914705 - B1_Mur1 SINE Alu 0 149 2 8 1338 785 196 7 0 chrX 98736574 98736712 -67913584 + B1_Mur2 SINE Alu 2 140 -9 8 1338 550 327 0 0 chrX 98736742 98736904 -67913392 + RSINE1 SINE B4 4 165 0 8 1338 1534 206 69 30 chrX 98736958 98737293 -67913003 - ORR1D1 LTR MaLR 0 374 27 8 1338 482 294 22 7 chrX 98737301 98737438 -67912858 + B1F1 SINE Alu 10 148 -1 8 1338 670 167 129 0 chrX 98737442 98737574 -67912722 + B1_Mur1 SINE Alu 1 149 0 8 1338 253 229 246 0 chrX 98737584 98737645 -67912651 + ID4_ SINE ID 2 77 -6 8 1338 277 250 0 216 chrX 98738841 98738904 -67911392 - ID4_ SINE ID -2 81 27 8 1338 1190 62 0 0 chrX 98738904 98739050 -67911246 - B1_Mus2 SINE Alu 0 147 2 8 1338 277 250 0 216 chrX 98739050 98739088 -67911208 - ID4_ SINE ID -57 26 2 8 1338 262 330 45 54 chrX 98739088 98739198 -67911098 - B1_Mm SINE Alu -36 111 3 8 1338 831 192 14 0 chrX 98739707 98739853 -67910443 + B1_Mur4 SINE Alu 1 148 -2 8 1338 1202 56 0 0 chrX 98739967 98740109 -67910187 - B1_Mus2 SINE Alu -5 142 1 8 1338 456 308 30 15 chrX 98740170 98740302 -67909994 - B1F1 SINE Alu -10 139 6 8 1338 1392 75 32 0 chrX 98740332 98740519 -67909777 - B2_Mm2 SINE B2 -2 193 1 8 1338 424 295 0 39 chrX 98740604 98740731 -67909565 - B1F1 SINE Alu -1 148 27 8 1338 209 140 0 23 chrX 98740893 98740919 -67909377 + T-rich Low_complexity Low_complexity 20 45 0 8 1338 1151 68 0 0 chrX 98740919 98741065 -67909231 - B1_Mus2 SINE Alu 0 147 2 8 1338 209 140 0 23 chrX 98741065 98741082 -67909214 + T-rich Low_complexity Low_complexity 3 19 0 8 1338 414 284 27 18 chrX 98741177 98741288 -67909008 - PB1D10 SINE Alu -5 112 1 8 1338 799 157 71 0 chrX 98741308 98741448 -67908848 - B1_Mur4 SINE Alu 0 150 1 8 1338 335 226 179 0 chrX 98741540 98741624 -67908672 - PB1D9 SINE Alu 0 120 22 8 1338 899 149 229 0 chrX 98741872 98742047 -67908249 - B3 SINE B2 -1 215 1 8 1338 565 192 152 0 chrX 98742704 98742829 -67907467 + B1_Mus1 SINE Alu 5 148 0 8 1338 405 331 71 7 chrX 98742938 98743078 -67907218 + B1F SINE Alu 1 149 0 8 1338 252 311 27 0 chrX 98743091 98743165 -67907131 + ID4_ SINE ID 2 77 -6 8 1338 466 223 8 59 chrX 98743998 98744117 -67906179 - BC1_Mm scRNA scRNA -39 113 1 8 1338 1088 191 30 20 chrX 98744649 98744852 -67905444 - B3 SINE B2 -11 205 1 8 1338 267 356 23 0 chrX 98745370 98745457 -67904839 + ID_B1 SINE B4 134 222 -2 8 1338 21 0 0 56 chrX 98745461 98745479 -67904817 + AT_rich Low_complexity Low_complexity 1 18 0 8 1338 1125 83 0 0 chrX 98745479 98745624 -67904672 - B1_Mus1 SINE Alu -2 146 2 8 1338 21 0 0 56 chrX 98745624 98745641 -67904655 + AT_rich Low_complexity Low_complexity 1 16 0 8 1338 495 280 15 39 chrX 98745749 98745879 -67904417 - B1F SINE Alu -8 141 15 8 1338 619 123 55 28 chrX 98745922 98746031 -67904265 + B1_Mur4 SINE Alu 5 116 -34 8 1338 309 273 0 123 chrX 98746031 98746064 -67904232 + MT2B LTR ERVL 165 288 -313 8 1338 480 259 0 18 chrX 98746042 98746152 -67904144 + PB1D10 SINE Alu 10 117 0 8 1338 525 136 0 0 chrX 98746269 98746350 -67903946 - RMER19A LTR ERVK -503 234 154 8 1338 1414 72 17 0 chrX 98746395 98746576 -67903720 - B2_Mm2 SINE B2 -10 185 2 8 1338 196 162 0 26 chrX 98746578 98746616 -67903680 - MIRc SINE MIR -116 152 116 8 1338 587 290 0 42 chrX 98746672 98746816 -67903480 - ID_B1 SINE B4 0 224 87 8 1338 1009 278 13 50 chrX 98746870 98747173 -67903123 - B4A SINE B4 0 292 1 8 1338 552 262 27 41 chrX 98747176 98747323 -67902973 - ID_B1 SINE B4 0 224 80 8 1338 540 231 108 0 chrX 98747330 98747460 -67902836 - B1F SINE Alu -5 144 1 8 1338 2027 151 42 11 chrX 98748965 98749321 -67900975 - ORR1B2 LTR MaLR 0 367 1 8 1338 1000 146 208 0 chrX 98749463 98749641 -67900655 + B3 SINE B2 2 216 0 8 1338 307 200 0 0 chrX 98749674 98749724 -67900572 - ID4_ SINE ID -20 63 14 8 1338 427 278 19 0 chrX 98750046 98750154 -67900142 - PB1D10 SINE Alu -6 111 2 8 1338 201 132 0 0 chrX 98750159 98750197 -67900099 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 8 1338 892 110 58 14 chrX 98750199 98750337 -67899959 - B1_Mur4 SINE Alu -2 148 5 8 1338 218 255 0 0 chrX 98750361 98750412 -67899884 + (TG)n Simple_repeat Simple_repeat 2 52 0 8 1338 876 124 6 82 chrX 98750413 98750571 -67899725 + B2_Mm2 SINE B2 1 146 -49 8 1338 22 35 0 0 chrX 98750738 98750767 -67899529 + AT_rich Low_complexity Low_complexity 1 29 0 8 1338 506 292 79 14 chrX 98750780 98750919 -67899377 - B3 SINE B2 -66 150 3 8 1338 211 219 55 0 chrX 98750931 98751004 -67899292 + CT-rich Low_complexity Low_complexity 4 80 0 8 1338 854 169 7 33 chrX 98751030 98751183 -67899113 - B1_Mur2 SINE Alu 0 149 1 8 1338 556 240 94 68 chrX 98751219 98751411 -67898885 - B3A SINE B2 0 198 2 8 1338 419 234 90 0 chrX 98751477 98751588 -67898708 + ID_B1 SINE B4 104 224 0 8 1338 330 320 70 31 chrX 98752822 98752951 -67897345 - ID_B1 SINE B4 0 224 91 8 1338 186 160 0 0 chrX 98753062 98753112 -67897184 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 8 1338 985 54 92 0 chrX 98753112 98753242 -67897054 - B1_Mus2 SINE Alu -5 142 1 8 1338 489 267 7 69 chrX 98753252 98753330 -67896966 - B1_Mur1 SINE Alu -6 143 66 9 1338 4219 105 94 7 chrX 98753330 98754023 -67896273 - RMER6A LTR ERVK -3 753 1 9 1338 489 267 7 69 chrX 98754023 98754089 -67896207 - B1_Mur1 SINE Alu -84 65 8 9 1338 360 343 38 0 chrX 98754114 98754219 -67896077 - PB1D10 SINE Alu -5 112 4 9 1338 1127 68 14 0 chrX 98754418 98754564 -67895732 + B1_Mus1 SINE Alu 1 148 0 9 1338 231 36 0 0 chrX 98754704 98754732 -67895564 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 9 1338 1314 81 6 0 chrX 98754732 98754905 -67895391 - B2_Mm1t SINE B2 -19 174 1 9 1338 233 109 0 21 chrX 98755590 98755637 -67894659 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 9 1338 1771 204 15 12 chrX 98755668 98756000 -67894296 - Lx5 LINE L1 -79 6971 6639 9 1338 594 224 0 0 chrX 98756029 98756136 -67894160 + PB1D10 SINE Alu 6 112 -5 9 1338 439 261 61 67 chrX 98756512 98756676 -67893620 + MER5A1 DNA MER1_type 1 163 -3 9 1338 1190 49 0 0 chrX 98756770 98756912 -67893384 - B1_Mus1 SINE Alu -5 143 2 9 1338 1294 58 103 0 chrX 98757068 98757242 -67893054 + B2_Mm1t SINE B2 2 193 0 9 1338 248 284 30 0 chrX 98757860 98757927 -67892369 + PB1D10 SINE Alu 41 109 -8 9 1338 1142 124 6 28 chrX 98758329 98758511 -67891785 + B2_Mm1t SINE B2 2 179 -14 9 1338 357 102 8 34 chrX 98758562 98758628 -67891668 + B2_Mm2 SINE B2 47 114 -102 9 1338 370 135 486 0 chrX 98758676 98758750 -67891546 + PB1D9 SINE Alu 1 110 -10 9 1338 813 166 14 14 chrX 98759336 98759483 -67890813 - B1_Mus2 SINE Alu 0 147 1 9 1338 401 240 152 9 chrX 98759600 98759705 -67890591 - PB1 SINE Alu -4 123 4 9 1338 811 50 244 0 chrX 98759821 98759940 -67890356 + B1_Mus1 SINE Alu 1 148 0 9 1338 765 180 269 0 chrX 98759970 98760137 -67890159 + B3 SINE B2 5 216 0 9 1338 26 0 0 0 chrX 98760258 98760284 -67890012 + AT_rich Low_complexity Low_complexity 1 26 0 9 1338 1194 113 6 6 chrX 98760298 98760467 -67889829 + B2_Mm1t SINE B2 2 170 -23 9 1338 425 113 330 28 chrX 98760485 98760594 -67889702 + B2_Mm2 SINE B2 47 188 -7 9 1338 1080 70 21 0 chrX 98760788 98760930 -67889366 - B1_Mus2 SINE Alu -1 146 2 9 1338 1397 68 6 0 chrX 98760956 98761133 -67889163 - B2_Mm1a SINE B2 -14 179 2 9 1338 1555 57 0 0 chrX 98761146 98761339 -67888957 - B2_Mm1t SINE B2 0 193 1 9 1338 1335 58 53 0 chrX 98761414 98761585 -67888711 - B2_Mm2 SINE B2 -15 180 1 9 1338 432 0 0 0 chrX 98761613 98761661 -67888635 + (CA)n Simple_repeat Simple_repeat 1 48 0 9 1338 448 274 0 10 chrX 98761743 98761846 -67888450 + ID_B1 SINE B4 82 183 -41 9 1338 533 210 186 0 chrX 98762099 98762223 -67888073 + B1_Mur2 SINE Alu 2 148 -1 9 1338 1175 84 12 6 chrX 98762260 98762428 -67887868 + B2_Mm2 SINE B2 2 170 -25 9 1338 1107 197 0 19 chrX 98762493 98762705 -67887591 - B3 SINE B2 -6 210 3 9 1338 884 152 14 14 chrX 98763022 98763169 -67887127 - B1_Mus2 SINE Alu 0 147 1 9 1338 560 269 63 57 chrX 98763188 98763346 -67886950 - RSINE1 SINE B4 0 165 7 9 1338 636 244 103 27 chrX 98763355 98763540 -67886756 - B3 SINE B2 -10 206 8 9 1338 592 274 0 8 chrX 98763592 98763710 -67886586 - B1F SINE Alu -31 118 2 9 1338 565 304 139 0 chrX 98764207 98764365 -67885931 - B3A SINE B2 -18 180 1 9 1338 809 139 296 18 chrX 98764465 98764634 -67885662 + B3 SINE B2 1 216 0 9 1338 340 282 82 0 chrX 98764655 98764740 -67885556 + B3A SINE B2 27 118 -80 9 1338 868 196 0 0 chrX 98764753 98764901 -67885395 + B1_Mur3 SINE Alu 2 149 0 9 1338 560 111 11 0 chrX 98764909 98764999 -67885297 + (GA)n Simple_repeat Simple_repeat 2 92 0 9 1338 610 229 21 28 chrX 98765504 98765648 -67884648 - B1_Mur1 SINE Alu -5 144 2 9 1338 716 203 37 22 chrX 98766380 98766516 -67883780 + ID_B1 SINE B4 86 223 -1 9 1338 378 327 57 75 chrX 98766522 98766617 -67883679 + RSINE1 SINE B4 6 93 -72 9 1338 1351 86 11 5 chrX 98766617 98766805 -67883491 - B2_Mm2 SINE B2 -6 189 1 9 1338 378 327 57 75 chrX 98766805 98766868 -67883428 + RSINE1 SINE B4 94 161 -4 9 1338 784 240 62 39 chrX 98766948 98767019 -67883277 + ID_B1 SINE B4 12 222 0 9 1338 1100 37 0 0 chrX 98767019 98767154 -67883142 + B1_Mus2 SINE Alu 13 147 0 9 1338 366 321 45 0 chrX 98767340 98767474 -67882822 - B1F1 SINE Alu -9 140 1 9 1338 720 256 95 62 chrX 98767506 98767876 -67882420 - L1M4 LINE L1 -427 5757 5376 9 1338 508 259 162 6 chrX 98767943 98768110 -67882186 - B3A SINE B2 -4 194 2 9 1338 220 283 207 25 chrX 98768599 98768721 -67881575 + L2b LINE L2 3029 3170 -217 9 1338 301 284 12 0 chrX 98768734 98768815 -67881481 - ID4_ SINE ID -1 82 1 9 1338 399 262 0 95 chrX 98768818 98768966 -67881330 - PB1 SINE Alu -2 125 1 9 1338 188 375 45 0 chrX 98769353 98769441 -67880855 - L2 LINE L2 -1164 2255 2164 9 1338 630 173 181 0 chrX 98769454 98769581 -67880715 + B1_Mur4 SINE Alu 1 150 0 9 1338 251 349 19 9 chrX 98769640 98769747 -67880549 - PB1D10 SINE Alu -9 108 1 9 1338 1141 50 7 0 chrX 98769964 98770104 -67880192 - B1_Mus2 SINE Alu -5 142 2 9 1338 725 158 22 36 chrX 98770188 98770326 -67879970 + B1_Mur1 SINE Alu 13 148 -1 9 1338 682 179 48 16 chrX 98770463 98770588 -67879708 + ID_B1 SINE B4 96 224 0 9 1338 564 267 29 22 chrX 98770819 98770957 -67879339 + ID_B1 SINE B4 86 224 0 9 1338 223 324 0 14 chrX 98771278 98771347 -67878949 - B1F SINE Alu -11 138 71 9 1338 195 42 0 0 chrX 98771883 98771907 -67878389 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1338 1058 68 6 75 chrX 98772250 98772409 -67877887 - B1_Mus1 SINE Alu 0 148 1 9 1338 1069 83 135 6 chrX 98772619 98772789 -67877507 + B2_Mm2 SINE B2 3 194 -1 9 1338 513 210 30 10 chrX 98772802 98772903 -67877393 + PB1D9 SINE Alu 5 107 -13 9 1338 429 290 9 18 chrX 98772921 98773030 -67877266 - RSINE1 SINE B4 -55 110 3 9 1338 256 246 92 0 chrX 98773390 98773455 -67876841 + Charlie4z DNA MER1_type 54 124 -43 9 1338 378 284 101 0 chrX 98773943 98774052 -67876244 - RSINE1 SINE B4 -8 157 38 9 1338 336 279 134 9 chrX 98774571 98774683 -67875613 - ID_B1 SINE B4 0 224 99 9 1338 320 0 0 24 chrX 98774691 98774732 -67875564 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 9 1338 438 93 25 82 chrX 98774737 98774826 -67875470 - B1F2 SINE Alu -7 142 41 9 1338 22 0 0 0 chrX 98774837 98774859 -67875437 + AT_rich Low_complexity Low_complexity 1 22 0 9 1338 624 202 7 58 chrX 98774859 98774996 -67875300 + B1_Mur4 SINE Alu 20 149 -1 9 1338 804 209 107 6 chrX 98775013 98775191 -67875105 - B3A SINE B2 -2 196 1 9 1338 1686 26 0 0 chrX 98775384 98775577 -67874719 + B2_Mm1t SINE B2 1 193 0 9 1338 686 206 48 28 chrX 98775794 98775939 -67874357 + B1_Mur2 SINE Alu 2 149 0 9 1338 605 179 9 9 chrX 98775946 98776053 -67874243 + PB1D9 SINE Alu 5 111 -9 9 1338 585 0 0 0 chrX 98776057 98776122 -67874174 + (GA)n Simple_repeat Simple_repeat 2 66 0 9 1338 561 203 131 54 chrX 98776255 98776385 -67873911 + B1_Mur1 SINE Alu 2 141 -8 9 1338 1150 54 0 13 chrX 98776511 98776660 -67873636 + B1_Mus2 SINE Alu 1 147 0 9 1338 308 281 57 19 chrX 98776862 98776967 -67873329 - PB1D10 SINE Alu -8 109 1 9 1338 507 289 45 29 chrX 98777252 98777448 -67872848 - B3 SINE B2 -3 192 3 9 1338 537 200 49 91 chrX 98777710 98777853 -67872443 + B1_Mur1 SINE Alu 2 138 -11 9 1338 221 209 0 0 chrX 98777848 98777891 -67872405 - B1F1 SINE Alu -21 128 86 9 1338 280 115 19 85 chrX 98777957 98778023 -67872273 + B1F1 SINE Alu 57 148 -1 9 1338 622 250 0 0 chrX 98778065 98778185 -67872111 - PB1D9 SINE Alu 0 120 1 9 1338 1198 55 7 0 chrX 98778460 98778606 -67871690 + B1_Mm SINE Alu 1 147 0 9 1338 1737 21 0 0 chrX 98778696 98778888 -67871408 + B2_Mm1a SINE B2 2 193 0 9 1338 469 167 20 0 chrX 98779033 98779135 -67871161 + CT-rich Low_complexity Low_complexity 2 105 0 9 1338 404 328 116 13 chrX 98780126 98780358 -67869938 - B4A SINE B4 -23 269 14 9 1338 566 165 27 0 chrX 98780401 98780520 -67869776 + B1_Mus2 SINE Alu 3 137 -11 9 1338 384 242 52 10 chrX 98780533 98780629 -67869667 - PB1D10 SINE Alu -17 100 1 9 1338 188 34 0 33 chrX 98780712 98780742 -67869554 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9 1338 531 115 86 9 chrX 98780767 98780872 -67869424 + B1_Mus1 SINE Alu 35 147 -1 9 1338 811 142 49 7 chrX 98781138 98781280 -67869016 - B1_Mur4 SINE Alu 0 150 3 9 1338 180 0 0 0 chrX 98781283 98781303 -67868993 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 9 1338 279 324 0 0 chrX 98781323 98781394 -67868902 - ID4_ SINE ID -9 74 4 9 1338 668 288 37 53 chrX 98781403 98781456 -67868840 - B3A SINE B2 -1 194 154 9 1338 455 0 18 0 chrX 98781456 98781511 -67868785 + (GA)n Simple_repeat Simple_repeat 1 56 0 9 1338 668 276 58 23 chrX 98781511 98781657 -67868639 - B3A SINE B2 -37 161 9 9 1338 1021 184 39 19 chrX 98781877 98782082 -67868214 - B3 SINE B2 -7 209 1 9 1338 344 273 26 0 chrX 98782167 98782244 -67868052 - ID4_ SINE ID -2 81 3 1 1338 264 59 0 0 chrX 98782300 98782334 -67867962 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1338 1252 34 0 0 chrX 98782334 98782481 -67867815 - B1_Mus2 SINE Alu 0 147 1 1 1338 720 194 175 16 chrX 98782528 98782717 -67867579 + ID_B1 SINE B4 5 223 -1 1 1338 1279 27 0 0 chrX 98782897 98783044 -67867252 + B1_Mus2 SINE Alu 1 147 0 1 1338 189 0 0 0 chrX 98783044 98783065 -67867231 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1338 1291 34 0 0 chrX 98783074 98783221 -67867075 + B1_Mm SINE Alu 1 147 0 1 1338 186 43 0 0 chrX 98783365 98783388 -67866908 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 1 1338 460 246 8 8 chrX 98783390 98783509 -67866787 - PB1D9 SINE Alu 0 120 2 1 1338 368 322 35 0 chrX 98783641 98783756 -67866540 + ID_B1 SINE B4 1 119 -105 1 1338 624 212 88 29 chrX 98783802 98783938 -67866358 - B1_Mur1 SINE Alu -5 144 1 1 1338 228 232 54 0 chrX 98783978 98784034 -67866262 - L1MC1 LINE L1 -32 6301 6243 1 1338 296 247 82 10 chrX 98784188 98784286 -67866010 + PB1D9 SINE Alu 9 113 -7 1 1338 259 266 96 17 chrX 98784315 98784430 -67865866 + L1MC5 LINE L1 7805 7928 -33 1 1338 536 176 9 36 chrX 98784434 98784546 -67865750 + B1_Mur2 SINE Alu 41 149 0 1 1338 238 0 0 0 chrX 98784665 98784695 -67865601 + B1_Mur4 SINE Alu 111 140 -10 1 1338 741 257 38 5 chrX 98784711 98784895 -67865401 + B3 SINE B2 27 216 0 1 1338 632 24 0 12 chrX 98784955 98785039 -67865257 - B1_Mm SINE Alu 0 147 65 1 1338 690 191 8 0 chrX 98785046 98785172 -67865124 + B1_Mur3 SINE Alu 22 148 -1 1 1338 213 330 0 108 chrX 98785499 98785547 -67864749 + L2a LINE L2 3283 3326 -100 1 1338 1253 86 69 0 chrX 98785547 98785722 -67864574 - B2_Mm2 SINE B2 -8 187 1 1 1338 213 330 0 108 chrX 98785722 98785775 -67864521 + L2a LINE L2 3327 3373 -53 1 1338 281 315 54 0 chrX 98786568 98786679 -67863617 + MIRb SINE MIR 5 121 -147 1 1338 200 125 0 24 chrX 98787849 98787890 -67862406 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 1 1338 651 282 47 0 chrX 98788025 98788195 -67862101 + B3A SINE B2 2 179 -19 1 1338 723 137 145 0 chrX 98788236 98788353 -67861943 - B1_Mur4 SINE Alu -15 135 2 1 1338 22 56 0 0 chrX 98788356 98788392 -67861904 + AT_rich Low_complexity Low_complexity 1 36 0 1 1338 491 201 257 0 chrX 98788683 98788827 -67861469 - MIRb SINE MIR -77 191 11 1 1338 27 0 0 0 chrX 98789689 98789716 -67860580 + AT_rich Low_complexity Low_complexity 1 27 0 1 1338 1526 48 26 11 chrX 98789810 98790000 -67860296 - B2_Mm1t SINE B2 0 193 1 1 1338 221 355 0 0 chrX 98791324 98791386 -67858910 - ID4_ SINE ID -20 63 2 1 1338 339 311 134 70 chrX 98791682 98792011 -67858285 - L2c LINE L2 -5 3382 3033 1 1338 296 292 14 0 chrX 98792168 98792233 -67858063 + PB1D10 SINE Alu 10 75 -42 1 1338 372 195 83 0 chrX 98792233 98792322 -67857974 + B1_Mur1 SINE Alu 1 109 -40 1 1338 320 221 104 0 chrX 98792257 98792334 -67857962 + B4 SINE B4 128 212 -80 1 1338 366 259 0 0 chrX 98792456 98792541 -67857755 + ID_B1 SINE B4 124 208 -16 1 1338 1396 255 65 23 chrX 98793060 98793413 -67856883 - Lx5 LINE L1 -5 7045 6678 1 1338 1277 72 17 0 chrX 98793614 98793795 -67856501 - B2_Mm2 SINE B2 -11 184 1 1 1338 221 150 0 48 chrX 98793848 98793890 -67856406 - B2_Mm2 SINE B2 -108 87 48 1 1338 907 77 8 0 chrX 98793925 98794055 -67856241 - B2_Mm1t SINE B2 -14 179 49 1 1338 217 235 0 73 chrX 98794017 98794072 -67856224 - RSINE1 SINE B4 -79 86 36 1 1338 1178 68 7 0 chrX 98795906 98796052 -67854244 + B1_Mus2 SINE Alu 1 147 0 1 1338 235 165 131 20 chrX 98796611 98796710 -67853586 - Lx9 LINE L1 0 7644 7535 1 1338 341 146 0 0 chrX 98796764 98796819 -67853477 + B1_Mus2 SINE Alu 53 107 -40 1 1338 828 65 187 0 chrX 98796933 98797056 -67853240 + B1_Mus2 SINE Alu 2 147 0 1 1338 483 174 72 18 chrX 98797159 98797270 -67853026 + PB1D7 SINE Alu 1 117 -3 1 1338 501 273 56 21 chrX 98797884 98798026 -67852270 + ID_B1 SINE B4 4 150 -74 1 1338 335 250 0 26 chrX 98798267 98798345 -67851951 + B3A SINE B2 1 76 -122 1 1338 2466 201 71 114 chrX 98798461 98799153 -67851143 - Lx6 LINE L1 -5 7455 6794 1 1338 693 320 5 41 chrX 98799350 98799568 -67850728 - B4A SINE B4 -16 276 67 1 1338 523 234 36 0 chrX 98799569 98799680 -67850616 + RSINE1 SINE B4 39 153 -12 1 1338 2199 121 55 0 chrX 98799684 98800030 -67850266 + Lx LINE L1 6272 6636 -18 1 1338 242 209 132 15 chrX 98800074 98800142 -67850154 - B4 SINE B4 -215 77 2 1 1338 1162 43 0 0 chrX 98800169 98800307 -67849989 + B1_Mus1 SINE Alu 2 139 -9 1 1338 252 0 0 0 chrX 98800307 98800335 -67849961 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1 1338 202 90 0 82 chrX 98800393 98800466 -67849830 + T-rich Low_complexity Low_complexity 4 70 0 1 1338 840 150 50 0 chrX 98800467 98800607 -67849689 - B1_Mur3 SINE Alu -1 148 2 1 1338 338 159 0 11 chrX 98800612 98800701 -67849595 + (TG)n Simple_repeat Simple_repeat 1 88 0 1 1338 479 263 6 106 chrX 98800702 98800872 -67849424 - RSINE1 SINE B4 0 165 13 1 1338 387 320 8 8 chrX 98801011 98801137 -67849159 - B1_Mus1 SINE Alu -12 136 11 1 1338 1322 91 11 21 chrX 98801199 98801390 -67848906 - B2_Mm1t SINE B2 -4 189 1 1 1338 540 209 27 0 chrX 98801446 98801556 -67848740 + PB1D9 SINE Alu 2 114 -6 1 1338 761 184 7 22 chrX 98801668 98801807 -67848489 - B1_Mur4 SINE Alu 0 150 14 1 1338 493 267 157 11 chrX 98801808 98801986 -67848310 - B3 SINE B2 -5 211 8 1 1338 459 325 57 25 chrX 98802056 98802214 -67848082 - RSINE1 SINE B4 0 165 3 1 1338 3964 49 0 0 chrX 98802507 98802979 -67847317 + L1_Mus1 LINE L1 6095 6566 -1 1 1338 22 0 0 0 chrX 98802979 98803001 -67847295 + AT_rich Low_complexity Low_complexity 1 22 0 1 1338 186 319 119 13 chrX 98803047 98803206 -67847090 - L2 LINE L2 -1292 2127 1952 1 1338 249 146 0 0 chrX 98803377 98803425 -67846871 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1338 408 91 0 0 chrX 98803424 98803490 -67846806 + (GA)n Simple_repeat Simple_repeat 1 66 0 1 1338 523 254 8 15 chrX 98803934 98804066 -67846230 - B3A SINE B2 -67 131 1 1 1338 235 204 41 0 chrX 98804187 98804236 -67846060 + PB1D9 SINE Alu 63 113 -7 1 1338 643 44 99 0 chrX 98804482 98804573 -67845723 + B2_Mm2 SINE B2 1 100 -95 1 1338 339 85 0 0 chrX 98804573 98804620 -67845676 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 1 1338 837 181 29 0 chrX 98804644 98804782 -67845514 + B1_Mur3 SINE Alu 2 143 -6 1 1338 642 207 200 0 chrX 98804806 98804981 -67845315 + B3 SINE B2 7 216 0 1 1338 1196 55 0 0 chrX 98805040 98805186 -67845110 + B1_Mus1 SINE Alu 2 147 -1 1 1338 681 178 61 86 chrX 98805208 98805405 -67844891 + B2_Mm2 SINE B2 2 193 -2 1 1338 1768 116 73 114 chrX 98806133 98806393 -67843903 + ORR1A2 LTR MaLR 1 272 -55 1 1338 1263 34 0 0 chrX 98806393 98806540 -67843756 + B1_Mus2 SINE Alu 1 147 0 1 1338 1768 116 73 114 chrX 98806540 98806620 -67843676 + ORR1A2 LTR MaLR 273 327 0 1 1338 358 283 35 17 chrX 98806794 98806820 -67843476 - PB1D10 SINE Alu 0 117 4 1 1338 381 279 0 0 chrX 98806820 98806906 -67843390 - ID_B1 SINE B4 -54 170 85 1 1338 1159 68 0 0 chrX 98806939 98807086 -67843210 - B1_Mus1 SINE Alu 0 148 2 1 1338 600 179 34 23 chrX 98807123 98807269 -67843027 - ORR1B1 LTR MaLR -128 266 114 1 1338 573 298 0 12 chrX 98807437 98807597 -67842699 - RSINE1 SINE B4 -4 161 4 1 1338 351 245 82 36 chrX 98807628 98807738 -67842558 + B1F1 SINE Alu 3 117 0 1 1338 550 198 18 28 chrX 98807796 98807905 -67842391 + B1_Mur1 SINE Alu 42 149 0 1 1338 746 211 0 69 chrX 98807925 98808098 -67842198 - B3 SINE B2 -55 161 1 1 1338 783 109 78 0 chrX 98808110 98808238 -67842058 - B1_Mus2 SINE Alu -1 146 9 1 1338 297 284 13 13 chrX 98808276 98808351 -67841945 + RSINE1 SINE B4 4 78 -87 1 1338 332 256 44 11 chrX 98808434 98808525 -67841771 - B1F SINE Alu -46 103 10 1 1338 226 329 14 0 chrX 98808621 98808691 -67841605 + ID2 SINE ID 2 72 -11 1 1338 245 375 24 14 chrX 98808993 98809204 -67841092 - L2 LINE L2 -630 2789 2577 1 1338 1252 149 36 0 chrX 98809210 98809404 -67840892 + B3 SINE B2 4 204 -12 1 1338 369 0 0 0 chrX 98809443 98809484 -67840812 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1338 252 150 0 16 chrX 98809496 98809557 -67840739 - Lx9 LINE L1 -8 7636 7577 1 1338 1086 161 5 5 chrX 98809624 98809817 -67840479 + URR1B DNA MER1_type 33 225 0 1 1338 592 290 145 34 chrX 98809821 98810117 -67840179 - MT2A LTR ERVL -136 397 69 1 1338 1096 41 12 88 chrX 98810309 98810469 -67839827 + B1_Mus1 SINE Alu 1 148 0 1 1338 207 0 0 0 chrX 98810482 98810505 -67839791 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1338 1129 72 0 0 chrX 98810633 98810771 -67839525 + B1_Mus2 SINE Alu 1 138 -9 1 1338 699 214 14 21 chrX 98810855 98810998 -67839298 - B1F2 SINE Alu -7 142 1 1 1338 963 243 48 0 chrX 98811096 98811302 -67838994 - B3 SINE B2 0 216 1 1 1338 427 269 0 9 chrX 98811362 98811471 -67838825 - B3A SINE B2 -21 177 70 1 1338 569 279 74 25 chrX 98811591 98811793 -67838503 - B3 SINE B2 -3 213 2 1 1338 1131 65 0 0 chrX 98811917 98812056 -67838240 - B1_Mus1 SINE Alu -9 139 1 1 1338 189 0 0 0 chrX 98812291 98812312 -67837984 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 1338 198 0 0 0 chrX 98812363 98812385 -67837911 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1338 979 59 22 0 chrX 98812385 98812521 -67837775 - B1_Mm SINE Alu 0 147 9 1 1338 1411 71 22 0 chrX 98812521 98812703 -67837593 - B2_Mm2 SINE B2 -8 187 2 1 1338 557 225 9 18 chrX 98813014 98813127 -67837169 - PB1D7 SINE Alu -8 112 1 1 1338 498 61 0 0 chrX 98813248 98813314 -67836982 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 1338 369 62 0 0 chrX 98813610 98813658 -67836638 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1338 324 0 0 0 chrX 98813692 98813728 -67836568 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1338 476 32 16 0 chrX 98813728 98813789 -67836507 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 1338 406 243 35 43 chrX 98813792 98813908 -67836388 + L1MC3 LINE L1 7061 7175 -610 1 1338 1225 118 5 10 chrX 98813915 98814111 -67836185 + B2_Mm2 SINE B2 1 195 0 1 1338 586 204 284 0 chrX 98814186 98814348 -67835948 + B3 SINE B2 2 209 -7 1 1338 322 346 15 7 chrX 98814360 98814497 -67835799 - RSINE1 SINE B4 -19 146 9 1 1338 306 270 0 4 chrX 98814507 98814596 -67835700 - L1M4 LINE L1 -700 5480 5395 1 1338 706 225 0 0 chrX 98814639 98814777 -67835519 - B1_Mur1 SINE Alu -8 141 4 1 1338 542 227 126 0 chrX 98814813 98814932 -67835364 - B1F SINE Alu -8 141 8 1 1338 413 92 173 0 chrX 98814985 98815092 -67835204 - B2_Mm2 SINE B2 -4 191 46 1 1338 558 39 13 0 chrX 98815142 98815220 -67835076 - B2_Mm1t SINE B2 -14 179 101 1 1338 316 138 75 30 chrX 98815250 98815261 -67835035 - B1_Mur3 SINE Alu -3 146 137 1 1338 351 0 0 0 chrX 98815261 98815300 -67834996 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 1 1338 316 138 75 30 chrX 98815300 98815349 -67834947 - B1_Mur3 SINE Alu -13 136 83 1 1338 1274 52 0 11 chrX 98815349 98815523 -67834773 + B2_Mm2 SINE B2 3 174 -21 1 1338 204 40 0 0 chrX 98816100 98816125 -67834171 + (CCTG)n Simple_repeat Simple_repeat 2 26 0 1 1338 533 145 0 82 chrX 98816126 98816321 -67833975 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 1338 1166 74 0 0 chrX 98816441 98816589 -67833707 + B1_Mus1 SINE Alu 1 148 0 1 1338 273 163 0 0 chrX 98816675 98816724 -67833572 - LTR68 LTR ERV1 -5 735 687 1 1338 279 176 0 0 chrX 98816892 98816943 -67833353 + MTEb LTR MaLR 1 51 -328 1 1338 331 307 34 29 chrX 98816977 98817114 -67833182 + B3A SINE B2 67 209 -7 1 1338 414 245 63 9 chrX 98817124 98817235 -67833061 + MTEb LTR MaLR 38 154 -225 1 1338 784 250 22 5 chrX 98817233 98817403 -67832893 + MTD LTR MaLR 34 206 -213 1 1338 883 108 22 0 chrX 98817403 98817559 -67832737 + B2_Mm2 SINE B2 2 179 -14 1 1338 375 106 290 9 chrX 98817605 98817718 -67832578 + B2_Mm2 SINE B2 46 195 0 1 1338 423 0 0 0 chrX 98817731 98817778 -67832518 + (GGAA)n Simple_repeat Simple_repeat 4 50 0 1 1338 338 195 0 94 chrX 98817778 98817863 -67832433 + MTD LTR MaLR 196 272 -147 1 1338 780 273 33 73 chrX 98817971 98818271 -67832025 + B4A SINE B4 2 289 -3 1 1338 582 200 15 195 chrX 98818319 98818481 -67831815 + MTEb LTR MaLR 164 289 -90 1 1338 1205 75 92 0 chrX 98818481 98818655 -67831641 - B2_Mm2 SINE B2 -1 194 5 1 1338 582 200 15 195 chrX 98818655 98818753 -67831543 + MTEb LTR MaLR 290 377 -2 1 1338 698 200 20 14 chrX 98818771 98818918 -67831378 + B1_Mur1 SINE Alu 2 149 0 1 1338 257 292 93 9 chrX 98818982 98819089 -67831207 - LTR68 LTR ERV1 -271 469 354 1 1338 333 118 0 0 chrX 98819106 98819157 -67831139 + (GGGA)n Simple_repeat Simple_repeat 3 53 0 1 1338 424 231 48 0 chrX 98819304 98819408 -67830888 + B1_Mus1 SINE Alu 40 148 0 1 1338 22 0 0 30 chrX 98819408 98819419 -67830877 + AT_rich Low_complexity Low_complexity 1 11 0 1 1338 1227 47 0 0 chrX 98819419 98819567 -67830729 + B1_Mus1 SINE Alu 1 148 0 1 1338 22 0 0 30 chrX 98819567 98819588 -67830708 + AT_rich Low_complexity Low_complexity 1 21 0 1 1338 205 320 0 0 chrX 98819623 98819701 -67830595 + (CGTG)n Simple_repeat Simple_repeat 1 78 0 1 1338 276 111 0 0 chrX 98819725 98819770 -67830526 + (A)n Simple_repeat Simple_repeat 1 45 0 1 1338 461 287 77 0 chrX 98819770 98819913 -67830383 + B3A SINE B2 27 180 -18 1 1338 3636 119 71 10 chrX 98820380 98820973 -67829323 - Lx2B LINE L1 0 7000 6372 1 1338 3022 128 2 0 chrX 98820974 98821410 -67828886 - L1_Mur1 LINE L1 -9 5877 5441 1 1338 456 19 0 0 chrX 98821410 98821463 -67828833 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 1338 785 97 40 0 chrX 98821496 98821620 -67828676 - B2_Mm2 SINE B2 -65 130 2 1 1338 1873 80 0 0 chrX 98821812 98822075 -67828221 + ORR1A2 LTR MaLR 57 319 -8 1 1338 463 204 64 9 chrX 98822069 98822178 -67828118 - B3 SINE B2 -100 116 2 1 1338 634 157 8 55 chrX 98822195 98822323 -67827973 - B1_Mur2 SINE Alu -6 143 22 1 1338 1103 62 7 20 chrX 98822392 98822540 -67827756 + B1_Mus2 SINE Alu 2 147 0 1 1338 1202 35 0 14 chrX 98822709 98822855 -67827441 + B1_Mm SINE Alu 2 145 -2 1 1338 589 99 99 0 chrX 98823006 98823109 -67827187 + B2_Mm2 SINE B2 1 113 -80 1 1338 498 108 0 0 chrX 98823113 98823187 -67827109 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 1 1338 529 183 143 34 chrX 98823197 98823316 -67826980 + B1_Mus1 SINE Alu 2 133 -15 1 1338 362 139 360 0 chrX 98823333 98823419 -67826877 + B3 SINE B2 3 119 -97 1 1338 1943 76 8 117 chrX 98823420 98823778 -67826518 + ORR1A2 LTR MaLR 1 319 -8 1 1338 377 264 21 21 chrX 98823788 98823881 -67826415 + B3 SINE B2 122 214 -2 1 1338 441 238 112 30 chrX 98823903 98824037 -67826259 + ID_B1 SINE B4 80 224 0 1 1338 789 162 15 0 chrX 98824614 98824750 -67825546 + B1_Mus1 SINE Alu 2 139 -9 1 1338 246 128 0 0 chrX 98824763 98824802 -67825494 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 1 1338 773 92 225 0 chrX 98824893 98825013 -67825283 + B1_Mus1 SINE Alu 2 148 0 1 1338 803 194 14 0 chrX 98825039 98825178 -67825118 + B1_Mur4 SINE Alu 2 142 -8 1 1338 491 278 22 8 chrX 98825215 98825349 -67824947 + RSINE1 SINE B4 14 149 -16 1 1338 362 296 52 0 chrX 98825525 98825660 -67824636 + MLT1E3 LTR MaLR 8 149 -475 1 1338 799 53 0 26 chrX 98825670 98825786 -67824510 - B1_Mus1 SINE Alu 0 148 36 1 1338 582 225 8 8 chrX 98825818 98825939 -67824357 + RSINE1 SINE B4 25 145 -20 1 1338 3654 83 123 0 chrX 98825996 98826516 -67823780 + MT2B2 LTR ERVL 1 584 0 1 1338 620 209 71 7 chrX 98826516 98826648 -67823648 + B1_Mur2 SINE Alu 8 149 0 1 1338 412 229 37 126 chrX 98826671 98826806 -67823490 + B3A SINE B2 6 128 -70 1 1338 234 0 0 0 chrX 98826847 98826873 -67823423 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1338 1232 41 0 7 chrX 98826873 98827020 -67823276 - B1_Mus2 SINE Alu 0 147 2 1 1338 252 0 0 0 chrX 98827038 98827066 -67823230 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1338 1159 82 0 0 chrX 98827087 98827233 -67823063 + B1_Mus2 SINE Alu 2 147 0 1 1338 199 62 0 111 chrX 98827239 98827311 -67822985 + A-rich Low_complexity Low_complexity 2 65 0 1 1338 218 57 0 54 chrX 98827335 98827372 -67822924 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 1 1338 1642 21 0 25 chrX 98827495 98827692 -67822604 + B2_Mm1a SINE B2 2 193 0 1 1338 205 77 50 25 chrX 98828176 98828216 -67822080 + T-rich Low_complexity Low_complexity 2 42 0 1 1339 1576 48 0 5 chrX 98828537 98828725 -67821571 + B2_Mm2 SINE B2 1 187 -8 1 1339 773 238 21 36 chrX 98828758 98828950 -67821346 - B3A SINE B2 0 198 10 1 1339 472 244 56 16 chrX 98828982 98829107 -67821189 - B1_Mur1 SINE Alu -8 141 12 1 1339 270 235 124 29 chrX 98829310 98829415 -67820881 - B1F SINE Alu -9 140 26 1 1339 541 259 7 40 chrX 98829523 98829672 -67820624 - ID_B1 SINE B4 0 224 81 1 1339 987 143 0 0 chrX 98829709 98829856 -67820440 - B1_Mus1 SINE Alu -1 147 1 1 1339 258 205 41 102 chrX 98829863 98829961 -67820335 + RLTR25B LTR ERVK 421 512 -516 1 1339 622 159 8 34 chrX 98829873 98829990 -67820306 + B1_Mus2 SINE Alu 33 146 -1 1 1339 446 191 264 0 chrX 98830027 98830137 -67820159 + B1_Mus2 SINE Alu 1 139 -8 1 1339 1061 92 0 41 chrX 98830176 98830323 -67819973 + B1_Mus1 SINE Alu 2 142 -6 1 1339 416 19 19 0 chrX 98830324 98830377 -67819919 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 1339 431 75 0 0 chrX 98830393 98830460 -67819836 - Lx LINE L1 0 6654 6588 1 1339 1103 77 7 0 chrX 98830541 98830696 -67819600 - L1_Mus2 LINE L1 0 6566 6411 1 1339 21 36 0 0 chrX 98830705 98830733 -67819563 + AT_rich Low_complexity Low_complexity 1 28 0 1 1339 773 167 50 7 chrX 98830922 98831061 -67819235 + B1_Mus2 SINE Alu 3 147 0 1 1339 314 40 60 0 chrX 98831540 98831590 -67818706 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 1 1339 359 222 99 33 chrX 98832284 98832405 -67817891 - B1F SINE Alu 0 149 21 1 1339 332 250 238 16 chrX 98832874 98832996 -67817300 + RSINE1 SINE B4 2 150 -15 1 1339 219 245 0 0 chrX 98833415 98833464 -67816832 + A-rich Low_complexity Low_complexity 4 52 0 1 1339 282 246 40 58 chrX 98833608 98833723 -67816573 + L2c LINE L2 3243 3382 -5 1 1339 1063 300 128 83 chrX 98833879 98834747 -67815549 + Charlie13a DNA Charlie 4 910 -604 1 1339 407 320 165 34 chrX 98834771 98835062 -67815234 + Charlie13a DNA Charlie 1042 1370 -144 1 1339 279 0 0 0 chrX 98835113 98835144 -67815152 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1339 1258 41 0 0 chrX 98839741 98839888 -67810408 + B1_Mus1 SINE Alu 2 148 0 1 1339 1586 42 5 0 chrX 98839970 98840161 -67810135 - B2_Mm1t SINE B2 0 193 2 1 1339 1252 83 38 22 chrX 98840165 98840350 -67809946 - B2_Mm1t SINE B2 -5 188 1 1 1339 183 42 0 0 chrX 98840675 98840699 -67809597 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1339 213 366 77 44 chrX 98840871 98841054 -67809242 - MIRb SINE MIR -8 260 72 1 1339 1090 75 14 0 chrX 98841755 98841901 -67808395 - B1_Mur3 SINE Alu -1 148 1 1 1339 595 262 52 16 chrX 98842023 98842217 -67808079 - ID_B1 SINE B4 -19 205 5 1 1339 1235 41 0 0 chrX 98843542 98843689 -67806607 - B1_Mus1 SINE Alu 0 148 2 1 1339 450 60 3 6 chrX 98843938 98844014 -67806282 - B1_Mm SINE Alu 0 147 46 1 1339 576 262 107 21 chrX 98844337 98844524 -67805772 - B3 SINE B2 -12 204 2 1 1339 613 284 49 103 chrX 98844534 98844738 -67805558 - ID_B1 SINE B4 -7 217 25 1 1339 1353 85 0 20 chrX 98844798 98844824 -67805472 - L1Md_F3 LINE L1 -1 6583 6562 1 1339 270 73 0 0 chrX 98844824 98844865 -67805431 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1339 1353 85 0 20 chrX 98844865 98845042 -67805254 - L1Md_F3 LINE L1 -23 6561 6385 1 1339 236 325 0 12 chrX 98845110 98845191 -67805105 - ID4 SINE ID -2 81 2 1 1339 1438 81 0 0 chrX 98845330 98845516 -67804780 + B2_Mm2 SINE B2 1 186 -9 1 1339 194 91 30 0 chrX 98845843 98845876 -67804420 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 1 1339 508 252 0 78 chrX 98845877 98846019 -67804277 - B1F1 SINE Alu -17 132 2 1 1339 376 306 6 70 chrX 98846972 98847044 -67803252 - MER46C DNA MER2_type -111 227 163 1 1339 1380 77 16 0 chrX 98847044 98847227 -67803069 + B2_Mm2 SINE B2 2 187 -8 1 1339 376 306 6 70 chrX 98847227 98847312 -67802984 - MER46C DNA MER2_type -176 162 80 1 1339 312 94 0 0 chrX 98848906 98848959 -67801337 + (T)n Simple_repeat Simple_repeat 1 53 0 1 1339 200 100 0 70 chrX 98850470 98850513 -67799783 + T-rich Low_complexity Low_complexity 3 42 0 1 1339 492 265 66 7 chrX 98851281 98851418 -67798878 - B1F SINE Alu 0 149 5 1 1339 275 244 23 11 chrX 98851547 98851634 -67798662 + L1MC5 LINE L1 6742 6829 -1132 1 1339 234 302 0 0 chrX 98851789 98851842 -67798454 - B1F1 SINE Alu -95 54 2 1 1339 700 120 248 0 chrX 98851858 98851975 -67798321 - B1_Mus1 SINE Alu 0 148 3 1 1339 307 151 320 69 chrX 98851996 98852112 -67798184 - B2_Mm2 SINE B2 -14 181 27 1 1339 809 97 9 0 chrX 98852156 98852269 -67798027 - B2_Mm1t SINE B2 -14 179 66 1 1339 540 297 35 41 chrX 98852315 98852487 -67797809 + B4A SINE B4 122 292 0 1 1339 321 238 75 58 chrX 98852554 98852728 -67797568 + L1MA7 LINE L1 5949 6125 -166 1 1339 251 220 66 33 chrX 98852739 98852800 -67797496 + PB1 SINE Alu 65 127 0 1 1339 219 351 10 69 chrX 98852827 98852928 -67797368 + ID_B1 SINE B4 78 172 -52 1 1339 308 327 9 47 chrX 98852842 98852948 -67797348 + PB1D10 SINE Alu 10 111 -6 1 1339 509 300 76 8 chrX 98852977 98853108 -67797188 + RSINE1 SINE B4 6 145 -20 1 1339 37 31 0 30 chrX 98853142 98853175 -67797121 + AT_rich Low_complexity Low_complexity 1 33 0 1 1339 327 49 0 0 chrX 98853175 98853216 -67797080 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1 1339 1106 49 13 34 chrX 98853216 98853365 -67796931 - B1_Mus1 SINE Alu -2 146 1 1 1339 37 31 0 30 chrX 98853365 98853396 -67796900 + AT_rich Low_complexity Low_complexity 1 30 0 1 1339 262 277 107 19 chrX 98853407 98853510 -67796786 - PB1D10 SINE Alu -3 114 3 1 1339 326 248 120 28 chrX 98853528 98853636 -67796660 + PB1D9 SINE Alu 2 119 -1 1 1339 686 255 6 50 chrX 98853768 98853929 -67796367 + B3 SINE B2 1 154 -62 1 1339 315 242 0 0 chrX 98853895 98853961 -67796335 - B1F SINE Alu -36 113 48 1 1339 305 295 38 25 chrX 98854050 98854130 -67796166 - ID SINE ID -135 89 9 1 1339 1215 48 0 0 chrX 98854178 98854324 -67795972 + B1_Mm SINE Alu 2 147 0 1 1339 25 0 0 0 chrX 98854330 98854355 -67795941 + AT_rich Low_complexity Low_complexity 1 25 0 1 1339 278 139 0 0 chrX 98854487 98854530 -67795766 + ID4_ SINE ID 2 44 -39 1 1339 378 136 0 0 chrX 98854544 98854625 -67795671 + (CA)n Simple_repeat Simple_repeat 2 82 0 1 1339 1004 199 26 26 chrX 98854706 98854897 -67795399 + B3 SINE B2 1 191 -25 1 1339 290 356 37 37 chrX 98854908 98855016 -67795280 - B1_Mur2 SINE Alu -33 116 9 1 1339 624 209 0 76 chrX 98855016 98855161 -67795135 - B1_Mur1 SINE Alu -15 134 1 1 1339 377 268 105 76 chrX 98855162 98855400 -67794896 + L1MC5 LINE L1 7659 7903 -58 1 1339 242 226 48 16 chrX 98855426 98855489 -67794807 + B4A SINE B4 81 145 -147 1 1339 610 228 0 62 chrX 98855440 98855585 -67794711 + B1F SINE Alu 12 147 -2 1 1339 480 281 28 14 chrX 98855837 98855978 -67794318 - ID_B1 SINE B4 -5 219 77 1 1339 309 192 73 110 chrX 98856138 98856220 -67794076 + B1_Mus1 SINE Alu 10 88 -32 1 1339 231 140 0 0 chrX 98856223 98856273 -67794023 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 1 1339 1124 95 0 0 chrX 98856275 98856422 -67793874 - B1_Mus1 SINE Alu 0 148 2 1 1339 307 50 0 0 chrX 98856422 98856462 -67793834 - B2_Mm2 SINE B2 -155 40 1 1 1339 1599 16 16 10 chrX 98856990 98857182 -67793114 - B2_Mm1a SINE B2 0 193 1 1 1339 260 53 26 0 chrX 98857205 98857243 -67793053 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1339 507 326 78 50 chrX 98857247 98857528 -67792768 - B4A SINE B4 -1 291 3 1 1339 814 176 73 91 chrX 98857534 98857753 -67792543 - B3 SINE B2 0 216 2 1 1339 460 164 36 41 chrX 98857826 98857932 -67792364 + PB1D7 SINE Alu 19 117 -32 1 1339 374 302 0 17 chrX 98857933 98858051 -67792245 + PB1D7 SINE Alu 5 120 0 1 1339 1466 58 27 0 chrX 98858061 98858249 -67792047 + B2_Mm1t SINE B2 1 193 0 1 1339 435 197 0 0 chrX 98858320 98858386 -67791910 + ID4 SINE ID 17 82 -1 1 1339 430 248 143 21 chrX 98858494 98858634 -67791662 + RSINE1 SINE B4 8 164 -1 1 1339 200 132 26 0 chrX 98859410 98859448 -67790848 + T-rich Low_complexity Low_complexity 2 40 0 1 1339 605 152 116 31 chrX 98859451 98859580 -67790716 - B1_Mus1 SINE Alu -8 140 1 1 1339 1282 149 72 75 chrX 98860112 98860460 -67789836 - Lx9 LINE L1 0 7644 7298 1 1339 703 145 13 132 chrX 98860513 98860664 -67789632 - B1_Mus1 SINE Alu -14 134 2 1 1339 633 232 42 0 chrX 98860680 98860822 -67789474 + B1_Mur1 SINE Alu 2 149 0 1 1339 904 229 69 15 chrX 98860826 98861030 -67789266 + B3 SINE B2 1 215 -1 1 1339 1217 48 0 0 chrX 98861063 98861210 -67789086 - B1_Mm SINE Alu 0 147 1 1 1339 782 204 0 21 chrX 98861219 98861364 -67788932 - B1_Mur2 SINE Alu -7 142 1 1 1339 782 204 32 49 chrX 98861404 98861589 -67788707 - B3A SINE B2 -16 182 1 1 1339 271 206 130 52 chrX 98861617 98861694 -67788602 - B1_Mur3 SINE Alu -1 148 66 1 1339 1146 57 0 0 chrX 98861728 98861869 -67788427 - B1_Mus2 SINE Alu -5 142 2 1 1339 419 305 51 25 chrX 98861906 98862064 -67788232 - RSINE1 SINE B4 0 165 4 1 1339 695 167 8 0 chrX 98862082 98862202 -67788094 - B1_Mur3 SINE Alu 0 149 29 1 1339 330 287 93 25 chrX 98862227 98862388 -67787908 - B2_Mm2 SINE B2 -9 186 15 1 1339 227 274 14 14 chrX 98862484 98862558 -67787738 - ID4_ SINE ID -9 74 1 1 1339 228 86 0 0 chrX 98863053 98863088 -67787208 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 1 1339 308 257 103 26 chrX 98863098 98863214 -67787082 - RSINE1 SINE B4 -38 127 3 1 1339 333 202 40 121 chrX 98863705 98863829 -67786467 + PB1D10 SINE Alu 2 115 -2 1 1339 1099 52 0 0 chrX 98863866 98864001 -67786295 + B1_Mus2 SINE Alu 1 135 -12 1 1339 223 225 14 14 chrX 98864147 98864219 -67786077 + CT-rich Low_complexity Low_complexity 1 72 0 1 1339 957 65 0 0 chrX 98864530 98864654 -67785642 - B2_Mm2 SINE B2 -70 125 2 1 1339 421 271 75 41 chrX 98864687 98864833 -67785463 - ID_B1 SINE B4 -5 219 69 1 1339 286 234 234 0 chrX 98864837 98864931 -67785365 - B1F1 SINE Alu -20 129 14 1 1339 440 233 97 37 chrX 98864887 98865021 -67785275 - ID_B1 SINE B4 -82 142 1 1 1339 181 0 33 33 chrX 98865546 98865576 -67784720 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 1339 273 161 0 0 chrX 98865759 98865798 -67784498 + T-rich Low_complexity Low_complexity 18 56 0 1 1339 1052 47 0 8 chrX 98865798 98865927 -67784369 - B1_Mm SINE Alu -19 128 1 1 1339 273 161 0 0 chrX 98865927 98865943 -67784353 + T-rich Low_complexity Low_complexity 2 17 0 1 1339 1686 31 0 0 chrX 98865943 98866136 -67784160 - B2_Mm1t SINE B2 0 193 1 1 1339 450 261 37 44 chrX 98866179 98866315 -67783981 - B1F1 SINE Alu -10 139 5 1 1339 533 277 148 5 chrX 98866528 98866717 -67783579 + ID_B1 SINE B4 2 217 -7 1 1339 666 278 70 58 chrX 98866717 98866958 -67783338 - B4A SINE B4 -20 272 29 1 1339 1202 84 12 0 chrX 98867397 98867563 -67782733 - B2_Mm2 SINE B2 -27 168 1 1 1339 412 250 37 0 chrX 98867573 98867681 -67782615 - PB1D10 SINE Alu -5 112 1 1 1339 219 36 0 0 chrX 98869334 98869362 -67780934 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1 1339 1114 52 0 7 chrX 98869362 98869499 -67780797 - B1_Mus2 SINE Alu -11 136 1 1 1339 1478 52 21 0 chrX 98869502 98869693 -67780603 - B2_Mm2 SINE B2 0 195 1 1 1339 1161 62 0 0 chrX 98869724 98869868 -67780428 + B1_Mus1 SINE Alu 1 144 -4 1 1339 180 0 0 0 chrX 98869870 98869890 -67780406 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1339 869 80 0 0 chrX 98869905 98870018 -67780278 - B2_Mm2 SINE B2 -80 115 3 1 1339 435 179 74 19 chrX 98870559 98870667 -67779629 - PB1D9 SINE Alu -2 118 5 1 1339 216 0 0 0 chrX 98870681 98870705 -67779591 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1339 327 241 0 57 chrX 98870705 98870784 -67779512 - PB1D10 SINE Alu -8 109 35 1 1339 398 202 34 45 chrX 98870890 98870978 -67779318 + B1_Mur1 SINE Alu 63 149 0 1 1339 246 234 0 0 chrX 98870990 98871037 -67779259 + B1F2 SINE Alu 1 47 -102 1 1339 236 191 0 21 chrX 98871067 98871115 -67779181 + GA-rich Low_complexity Low_complexity 1 47 0 1 1339 595 264 130 11 chrX 98871250 98871434 -67778862 - ID_B1 SINE B4 -18 206 1 1 1339 491 160 79 126 chrX 98871791 98872005 -67778291 - Lx9 LINE L1 0 7644 7441 1 1339 472 256 309 6 chrX 98872018 98872183 -67778113 - ID_B1 SINE B4 -7 217 3 1 1339 1478 48 43 0 chrX 98872300 98872487 -67777809 - B2_Mm2 SINE B2 0 195 1 1 1339 250 237 0 17 chrX 98872508 98872568 -67777728 - B1_Mus2 SINE Alu 0 147 89 1 1339 32 0 0 0 chrX 98872665 98872697 -67777599 + AT_rich Low_complexity Low_complexity 1 32 0 1 1339 451 207 304 0 chrX 98872699 98872834 -67777462 - B3 SINE B2 -9 207 32 1 1339 466 235 12 0 chrX 98872834 98872919 -67777377 - B3 SINE B2 -34 182 97 1 1339 378 242 39 39 chrX 98872907 98873010 -67777286 + PB1 SINE Alu 23 125 -2 1 1339 383 234 131 0 chrX 98873014 98873121 -67777175 + Lx8 LINE L1 7155 7275 -198 1 1339 1285 30 24 6 chrX 98873193 98873363 -67776933 - L1Md_F3 LINE L1 0 6584 6412 1 1339 369 0 0 0 chrX 98873498 98873539 -67776757 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1339 429 187 10 62 chrX 98875018 98875115 -67775181 + B1_Mur3 SINE Alu 57 148 -1 1 1339 253 316 52 13 chrX 98875351 98875428 -67774868 - PB1D10 SINE Alu -31 86 7 1 1339 580 87 11 11 chrX 98875461 98875554 -67774742 + (TTTC)n Simple_repeat Simple_repeat 1 93 0 1 1339 932 91 19 7 chrX 98875554 98875709 -67774587 + (TTTCC)n Simple_repeat Simple_repeat 3 159 0 1 1339 220 277 64 0 chrX 98875709 98875803 -67774493 + T-rich Low_complexity Low_complexity 1 100 0 1 1339 1014 47 0 53 chrX 98875804 98876030 -67774266 + (TTTC)n Simple_repeat Simple_repeat 1 213 0 1 1339 995 121 0 0 chrX 98876030 98876170 -67774126 - B1_Mus2 SINE Alu -7 140 1 1 1339 227 328 99 0 chrX 98876212 98876404 -67773892 - L1ME2z LINE L1 -55 6389 6179 1 1339 437 322 70 38 chrX 98876456 98876614 -67773682 - RSINE1 SINE B4 0 165 3 1 1339 345 24 0 0 chrX 98876644 98876686 -67773610 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1339 619 202 0 40 chrX 98876698 98876822 -67773474 + PB1D7 SINE Alu 2 120 0 1 1339 886 213 67 26 chrX 98877074 98877373 -67772923 - MTD LTR MaLR -23 396 18 1 1339 764 231 113 0 chrX 98880045 98880231 -67770065 + B3 SINE B2 1 207 -9 1 1339 328 218 137 108 chrX 98880309 98880448 -67769848 + B1_Mur3 SINE Alu 5 147 -2 1 1339 632 223 45 23 chrX 98880458 98880591 -67769705 + B1_Mur3 SINE Alu 7 142 -7 1 1339 9275 104 23 90 chrX 98880633 98882568 -67767728 - L1_Mus1 LINE L1 0 6567 4799 1 1339 351 0 0 0 chrX 98882568 98882607 -67767689 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1 1339 1273 26 26 0 chrX 98882607 98882761 -67767535 - B2_Mm1a SINE B2 -33 160 3 1 1339 553 248 31 16 chrX 98882771 98882898 -67767398 - B1_Mur1 SINE Alu -6 143 15 1 1339 9275 152 9 179 chrX 98882898 98883210 -67767086 - L1_Mus1 LINE L1 -1088 4789 4491 1 1339 3481 26 45 2 chrX 98883210 98883628 -67766668 - RLTR10C LTR ERVK 0 436 1 1 1339 9275 152 9 179 chrX 98883628 98884450 -67765846 - L1_Mus1 LINE L1 -1396 4490 3667 1 1339 2002 125 142 8 chrX 98884440 98884819 -67765477 - L1Md_F LINE L1 -5800 719 290 1 1339 337 229 124 44 chrX 98885479 98885616 -67764680 - L1MA6 LINE L1 -7 6293 6146 1 1339 454 271 9 18 chrX 98887378 98887487 -67762809 + PB1D7 SINE Alu 13 120 0 1 1339 268 208 57 0 chrX 98887688 98887741 -67762555 - PB1D10 SINE Alu -9 108 53 1 1339 462 225 80 9 chrX 98887812 98887924 -67762372 - PB1D9 SINE Alu 0 120 1 1 1339 237 327 124 9 chrX 98887961 98888066 -67762230 - PB1D10 SINE Alu 0 117 1 1 1339 278 106 21 0 chrX 98888078 98888125 -67762171 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 1339 1850 163 68 15 chrX 98888125 98888461 -67761835 - RMER1C Other Other -17 1325 972 1 1339 1211 199 41 106 chrX 98888476 98888864 -67761432 - RMER16 LTR ERVK 0 533 171 1 1339 214 324 28 14 chrX 98889048 98889120 -67761176 + MIR SINE MIR 20 92 -170 1 1339 898 194 44 35 chrX 98889154 98889357 -67760939 - B3 SINE B2 -10 206 2 1 1339 238 347 0 0 chrX 98889511 98889583 -67760713 - B4A SINE B4 -220 72 1 1 1339 302 226 8 152 chrX 98889600 98889725 -67760571 - PB1 SINE Alu -4 123 17 1 1339 37 23 0 0 chrX 98889754 98889798 -67760498 + AT_rich Low_complexity Low_complexity 1 44 0 1 1339 1152 184 19 19 chrX 98889822 98890032 -67760264 - B3 SINE B2 -6 210 1 1 1339 425 208 174 53 chrX 98890041 98890173 -67760123 - B1_Mur2 SINE Alu 0 149 2 1 1339 1107 70 0 0 chrX 98890570 98890712 -67759584 + B1_Mus2 SINE Alu 6 147 0 1 1339 336 48 0 0 chrX 98890712 98890754 -67759542 + (A)n Simple_repeat Simple_repeat 1 42 0 1 1339 372 252 93 0 chrX 98890795 98890902 -67759394 + PB1D10 SINE Alu 1 117 0 1 1339 330 269 162 20 chrX 98894041 98894157 -67756139 - L1MEf LINE L1 -4115 2085 1953 1 1339 985 58 55 41 chrX 98894157 98894302 -67755994 - B1_Mus1 SINE Alu -1 147 1 1 1339 330 269 162 20 chrX 98894302 98894333 -67755963 - L1MEf LINE L1 -4248 1952 1918 1 1339 332 323 45 8 chrX 98894358 98894492 -67755804 - B1F1 SINE Alu -6 143 5 1 1339 824 263 9 37 chrX 98894517 98894734 -67755562 + ID_B1 SINE B4 1 211 -13 1 1339 882 113 0 0 chrX 98894928 98895070 -67755226 + (CAG)n Simple_repeat Simple_repeat 3 144 0 1 1339 1919 43 0 0 chrX 98895085 98895317 -67754979 - L1_Mus1 LINE L1 -455 6112 5881 1 1339 3769 52 7 0 chrX 98895317 98895776 -67754520 + L1_Mus1 LINE L1 6106 6567 0 1 1339 747 177 57 0 chrX 98896344 98896485 -67753811 - B1_Mur2 SINE Alu 0 149 1 1 1339 373 285 146 0 chrX 98896488 98896618 -67753678 - B1F SINE Alu 0 149 1 1 1339 719 174 83 8 chrX 98896905 98897038 -67753258 - B1_Mur2 SINE Alu -1 148 6 1 1339 692 280 77 6 chrX 98897064 98897233 -67753063 - B3 SINE B2 -4 212 32 1 1339 1193 192 9 5 chrX 98897234 98897448 -67752848 + B3 SINE B2 2 216 0 1 1339 1161 62 7 20 chrX 98897473 98897622 -67752674 + B1_Mus1 SINE Alu 2 148 0 1 1339 285 182 0 0 chrX 98897666 98897710 -67752586 - B3A SINE B2 -153 45 2 1 1339 603 241 79 14 chrX 98897731 98897870 -67752426 - B1_Mur3 SINE Alu -1 148 1 1 1339 612 48 12 35 chrX 98897929 98898015 -67752281 - B1_Mus1 SINE Alu -40 108 25 1 1339 799 82 81 12 chrX 98898006 98898053 -67752243 + MTC-int LTR MaLR 1087 1138 -120 1 1339 1216 72 47 57 chrX 98898053 98898245 -67752051 - B2_Mm2 SINE B2 -4 191 2 1 1339 799 82 81 12 chrX 98898245 98898357 -67751939 + MTC-int LTR MaLR 1139 1256 -2 1 1339 181 265 87 14 chrX 98898791 98898860 -67751436 - MIRc SINE MIR -79 189 116 1 1339 361 260 0 0 chrX 98900774 98900870 -67749426 + GA-rich Low_complexity Low_complexity 4 99 0 1 1339 408 161 0 0 chrX 98900967 98901009 -67749287 + T-rich Low_complexity Low_complexity 40 81 0 1 1339 832 153 35 7 chrX 98901009 98901154 -67749142 - B1_Mur3 SINE Alu 0 149 1 1 1339 408 161 0 0 chrX 98901154 98901180 -67749116 + T-rich Low_complexity Low_complexity 14 39 0 1 1339 902 146 35 0 chrX 98901180 98901324 -67748972 - B1_Mur3 SINE Alu 0 149 1 1 1339 408 161 0 0 chrX 98901324 98901335 -67748961 + T-rich Low_complexity Low_complexity 3 13 0 1 1339 895 191 0 0 chrX 98901335 98901482 -67748814 - B1_Mus1 SINE Alu 0 148 2 1 1339 2564 172 93 6 chrX 98901631 98902105 -67748191 - RMER20A LTR ERVK 0 516 2 1 1339 480 282 52 22 chrX 98902820 98902954 -67747342 + ID_B1 SINE B4 86 223 -1 1 1339 21 0 0 0 chrX 98903670 98903691 -67746605 + AT_rich Low_complexity Low_complexity 1 21 0 1 1339 1309 14 0 0 chrX 98903696 98903843 -67746453 - B1_Mm SINE Alu 0 147 1 1 1339 180 0 0 0 chrX 98905082 98905102 -67745194 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1 1339 1104 89 14 0 chrX 98905103 98905249 -67745047 - B1_Mur4 SINE Alu -1 149 2 1 1339 278 275 14 14 chrX 98905346 98905416 -67744880 - ID4_ SINE ID 0 83 14 1 1339 40659 24 1 6 chrX 98905471 98911655 -67738641 - L1Md_T LINE L1 0 6582 435 1 1339 8358 133 26 141 chrX 98912396 98912690 -67737606 - RLTR21 LTR ERVK -9 1563 1292 1 1339 186 103 0 0 chrX 98912690 98912719 -67737577 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1339 8358 133 26 141 chrX 98912719 98913511 -67736785 - RLTR21 LTR ERVK -281 1291 591 1 1339 963 53 106 0 chrX 98913511 98913643 -67736653 + B1_Mus2 SINE Alu 1 146 -1 1 1339 8358 133 26 141 chrX 98913643 98913867 -67736429 - RLTR21 LTR ERVK -982 590 469 1 1339 1366 72 33 0 chrX 98913867 98914047 -67736249 + B2_Mm1t SINE B2 2 187 -6 1 1339 8358 133 26 141 chrX 98914047 98914490 -67735806 - RLTR21 LTR ERVK -1104 468 10 1 1339 1959 236 70 90 chrX 98914483 98915130 -67735166 - RLTR26 LTR ERVK -4 638 5 1 1339 1120 68 0 33 chrX 98915130 98915283 -67735013 + B1_Mus1 SINE Alu 1 148 0 1 1339 311 303 17 52 chrX 98915610 98915725 -67734571 + PB1D7 SINE Alu 6 116 -4 1 1339 364 232 88 73 chrX 98915853 98916031 -67734265 + MIRc SINE MIR 84 257 -11 1 1339 210 267 0 22 chrX 98916874 98916920 -67733376 - L2b LINE L2 -12 3363 3319 1 1339 245 217 83 0 chrX 98917463 98917523 -67732773 + MIR SINE MIR 92 156 -106 1 1339 351 317 69 75 chrX 98917524 98917858 -67732438 - MER2B DNA MER2_type 0 336 6 1 1339 212 365 12 12 chrX 98917863 98917949 -67732347 + MIR SINE MIR 156 241 -21 1 1339 216 0 0 0 chrX 98918153 98918177 -67732119 + (TTTG)n Simple_repeat Simple_repeat 4 27 0 1 1339 542 332 82 16 chrX 98918691 98919006 -67731290 - Lx8 LINE L1 -1 7472 7137 1 1339 550 256 55 91 chrX 98919073 98919292 -67731004 + B3 SINE B2 5 215 -1 1 1339 521 256 15 39 chrX 98919926 98920056 -67730240 - PB1 SINE Alu 0 127 1 1 1339 641 230 16 0 chrX 98920096 98920222 -67730074 - B1F SINE Alu -10 139 12 1 1339 582 234 186 8 chrX 98920603 98920732 -67729564 + RSINE1 SINE B4 8 159 -6 1 1339 2942 141 10 61 chrX 98921326 98921917 -67728379 + RLTR31_Mm LTR ERVK 1 561 0 1 1339 301 304 0 102 chrX 98922015 98922103 -67728193 - ID4_ SINE ID -2 81 3 1 1339 305 245 160 20 chrX 98922126 98922226 -67728070 - B1F SINE Alu -1 148 35 1 1339 1346 74 32 0 chrX 98922802 98922991 -67727305 + B2_Mm2 SINE B2 1 195 0 1 1339 392 296 164 62 chrX 98923473 98923729 -67726567 - MLT1D LTR MaLR 0 505 224 1 1339 387 0 0 0 chrX 98923837 98923880 -67726416 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1339 273 290 16 0 chrX 98923885 98923947 -67726349 - B4 SINE B4 -9 283 221 1 1339 284 44 44 0 chrX 98923952 98923997 -67726299 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 1 1339 570 282 7 21 chrX 98923997 98924142 -67726154 - B4 SINE B4 -69 223 81 1 1339 308 77 19 0 chrX 98924142 98924194 -67726102 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 1 1339 301 271 42 14 chrX 98924195 98924266 -67726030 - B4A SINE B4 -218 74 2 1 1339 23 0 0 0 chrX 98924275 98924298 -67725998 + AT_rich Low_complexity Low_complexity 1 23 0 1 1339 23 33 0 0 chrX 98924333 98924363 -67725933 + AT_rich Low_complexity Low_complexity 1 30 0 1 1339 486 264 146 0 chrX 98924382 98924492 -67725804 - RSINE1 SINE B4 -22 143 18 1 1339 460 284 0 10 chrX 98924507 98924610 -67725686 - ID_B1 SINE B4 -37 187 86 1 1339 1376 95 21 0 chrX 98924618 98924807 -67725489 - B2_Mm2 SINE B2 -2 193 1 1 1339 581 255 21 14 chrX 98924904 98925047 -67725249 - B1F2 SINE Alu -1 148 5 1 1339 439 331 20 14 chrX 98925047 98925194 -67725102 - B1F1 SINE Alu 0 149 2 1 1339 360 64 0 0 chrX 98925729 98925776 -67724520 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1339 518 242 244 44 chrX 98925776 98925997 -67724299 - B4A SINE B4 -23 269 1 1 1339 618 14 0 0 chrX 98926164 98926235 -67724061 + (GA)n Simple_repeat Simple_repeat 1 71 0 1 1339 326 235 160 34 chrX 98926235 98926344 -67723952 - ID_B1 SINE B4 -10 214 90 1 1339 580 193 114 0 chrX 98926237 98926351 -67723945 - B1_Mur1 SINE Alu -21 128 2 1 1339 21 0 0 0 chrX 98928599 98928620 -67721676 + GC_rich Low_complexity Low_complexity 1 21 0 1 1339 432 288 0 11 chrX 98928980 98929091 -67721205 - PB1 SINE Alu -18 109 1 1 1339 303 28 0 0 chrX 98929932 98929968 -67720328 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 1339 429 228 19 65 chrX 98930426 98930534 -67719762 - PB1D7 SINE Alu -5 115 13 1 1339 417 200 217 0 chrX 98930800 98930915 -67719381 - B1F1 SINE Alu -2 147 8 1 1339 585 252 0 0 chrX 98930931 98931046 -67719250 - PB1D10 SINE Alu -2 115 1 1 1339 309 307 135 56 chrX 98931400 98931652 -67718644 + Charlie18a DNA MER1_type 70 341 -1 1 1339 295 267 141 9 chrX 98932196 98932356 -67717940 + MIR SINE MIR 14 185 -77 1 1339 242 333 62 23 chrX 98934346 98934510 -67715786 + MIR3 SINE MIR 3 171 -97 1 1339 1432 158 108 6 chrX 98934811 98935135 -67715161 + Lx9 LINE L1 7287 7643 -1 1 1339 216 213 21 21 chrX 98935293 98935341 -67714955 - MIR SINE MIR -10 252 205 1 1339 270 0 0 0 chrX 98935341 98935371 -67714925 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1339 317 259 126 25 chrX 98935386 98935505 -67714791 - MIR SINE MIR -109 153 23 1 1339 2071 95 20 119 chrX 98935736 98936191 -67714105 - RMER17C LTR ERVK 0 410 1 1 1339 767 191 28 14 chrX 98936566 98936709 -67713587 + ID_B1 SINE B4 80 224 0 1 1339 352 276 82 2 chrX 98936793 98936907 -67713389 + PB1D10 SINE Alu 2 127 -22 1 1339 1235 48 0 0 chrX 98937011 98937158 -67713138 - B1_Mus1 SINE Alu -1 147 1 1 1339 855 224 10 58 chrX 98937588 98937796 -67712500 + B3A SINE B2 1 198 0 1 1339 29 47 0 0 chrX 98938299 98938342 -67711954 + AT_rich Low_complexity Low_complexity 1 43 0 1 1339 1059 109 0 7 chrX 98938355 98938503 -67711793 + B2_Mm2 SINE B2 3 149 -46 1 1339 186 103 0 0 chrX 98938504 98938533 -67711763 + (CATATA)n Simple_repeat Simple_repeat 5 33 0 1 1339 668 260 67 9 chrX 98938738 98938948 -67711348 + ID_B1 SINE B4 3 224 0 1 1339 882 159 4 2 chrX 98939019 98939180 -67711116 + B3A SINE B2 2 163 -53 1 1339 183 42 0 0 chrX 98939181 98939205 -67711091 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 1 1339 5152 163 31 26 chrX 98939307 98940188 -67710108 + RMER19B LTR ERVK 1 885 -17 1 1339 656 185 33 8 chrX 98940189 98940309 -67709987 + RLTR17 LTR ERVK 203 325 -367 1 1339 3827 175 28 71 chrX 98940309 98941215 -67709081 + RMER3D-int LTR ERVK 1976 2842 0 1 1339 2288 146 8 8 chrX 98941215 98941587 -67708709 + RLTR17 LTR ERVK 1 372 -320 1 1339 222 118 0 0 chrX 98941587 98941621 -67708675 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 1 1339 376 244 0 0 chrX 98941649 98941727 -67708569 - ID_B1 SINE B4 -31 193 116 1 1339 538 194 0 0 chrX 98941727 98941835 -67708461 + Lx6 LINE L1 7340 7447 -13 1 1339 24 32 0 0 chrX 98941835 98941866 -67708430 + AT_rich Low_complexity Low_complexity 1 31 0 1 1339 1485 220 125 34 chrX 98941892 98942499 -67707797 - RLTR40 LTR ERVK -64 753 4 1 1339 805 163 0 0 chrX 98942561 98942684 -67707612 - B1_Mus1 SINE Alu -25 123 1 1 1339 430 255 72 78 chrX 98942684 98942729 -67707567 - MT2B2 LTR ERVL -427 157 114 1 1339 344 281 24 0 chrX 98943860 98943942 -67706354 - B1F SINE Alu -19 130 47 1 1339 1783 122 52 4 chrX 98943949 98944221 -67706075 + MTC LTR MaLR 19 303 -118 1 1339 1306 244 10 31 chrX 98944643 98944931 -67705365 - B4 SINE B4 -2 290 9 1 1339 234 179 71 0 chrX 98944943 98944999 -67705297 - B1F SINE Alu -2 147 88 1 1339 22 0 0 0 chrX 98945004 98945026 -67705270 + AT_rich Low_complexity Low_complexity 1 22 0 1 1339 1341 138 28 28 chrX 98945038 98945254 -67705042 - B3 SINE B2 0 216 1 1 1339 238 264 40 27 chrX 98945254 98945328 -67704968 - MLT1D LTR MaLR -414 91 17 1 1339 233 277 132 0 chrX 98945635 98945718 -67704578 - MER5B DNA MER1_type -83 95 2 1 1339 1550 184 98 25 chrX 98946327 98946645 -67703651 + ORR1D1 LTR MaLR 30 370 -4 1 1339 1963 180 41 33 chrX 98946649 98947039 -67703257 + ORR1D1-int LTR MaLR 1 393 -977 1 1339 3380 179 175 65 chrX 98947039 98947443 -67702853 - RMER19B LTR ERVK 0 902 422 1 1339 1072 90 21 0 chrX 98947443 98947588 -67702708 - B1_Mus1 SINE Alu 0 148 1 1 1339 3380 179 175 65 chrX 98947588 98947996 -67702300 - RMER19B LTR ERVK -481 421 2 1 1339 244 132 74 19 chrX 98947996 98948046 -67702250 + ORR1D1-int LTR MaLR 388 440 -930 1 1339 710 215 208 6 chrX 98948032 98948205 -67702091 + MTD LTR MaLR 212 419 0 1 1339 390 91 0 0 chrX 98948451 98948506 -67701790 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 1339 432 0 0 0 chrX 98951242 98951290 -67699006 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1339 515 300 0 0 chrX 98951361 98951372 -67698924 - PB1D7 SINE Alu 0 120 110 1 1339 396 0 0 0 chrX 98951372 98951416 -67698880 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 1339 515 300 0 0 chrX 98951416 98951524 -67698772 - PB1D7 SINE Alu -11 109 2 1 1339 694 241 0 0 chrX 98951563 98951704 -67698592 - B1_Mur3 SINE Alu -7 142 2 1 1339 219 36 0 0 chrX 98951713 98951741 -67698555 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1 1339 815 210 58 126 chrX 98951741 98951964 -67698332 - ID_B1 SINE B4 -13 211 4 1 1339 342 0 0 0 chrX 98951966 98952004 -67698292 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1339 568 259 106 10 chrX 98952080 98952279 -67698017 - Tigger7 DNA MER2_type -52 2439 2229 1 1339 272 274 82 0 chrX 98952273 98952346 -67697950 - Tigger7 DNA MER2_type -2092 399 321 1 1339 410 241 11 0 chrX 98952383 98952470 -67697826 + B1F SINE Alu 36 123 -26 1 1339 330 310 86 31 chrX 98952506 98952669 -67697627 - Tigger7 DNA MER2_type -2219 272 101 1 1339 1011 207 23 46 chrX 98952893 98953111 -67697185 - B3 SINE B2 -2 214 2 1 1339 2056 142 33 212 chrX 98953208 98953500 -67696796 - RLTR41 LTR ERV1 0 446 215 1 1339 2101 39 0 27 chrX 98953500 98953761 -67696535 - L1_Mus1 LINE L1 0 6567 6314 1 1339 2056 142 33 212 chrX 98953761 98954011 -67696285 - RLTR41 LTR ERV1 -232 214 1 1 1339 831 135 56 14 chrX 98954035 98954178 -67696118 + B1_Mur4 SINE Alu 1 149 -1 1 1339 1603 158 127 40 chrX 98954270 98954465 -67695831 - RMER17C LTR ERVK 0 410 180 1 1339 735 30 29 37 chrX 98954465 98954601 -67695695 + (GGAGA)n Simple_repeat Simple_repeat 3 137 0 1 1339 1603 158 127 40 chrX 98954601 98954782 -67695514 - RMER17C LTR ERVK -231 179 1 1 1339 554 233 44 29 chrX 98955001 98955138 -67695158 + B1F SINE Alu 3 141 -8 1 1339 279 54 0 0 chrX 98955153 98955190 -67695106 + (CCA)n Simple_repeat Simple_repeat 1 37 0 1 1339 475 240 0 20 chrX 98955228 98955326 -67694970 + ID_B1 SINE B4 127 222 -2 1 1339 432 212 47 0 chrX 98955854 98955939 -67694357 - BC1_Mm scRNA scRNA -62 90 2 1 1339 941 129 14 7 chrX 98956134 98956275 -67694021 + B1_Mur2 SINE Alu 1 142 -7 1 1339 324 281 101 10 chrX 98956627 98956798 -67693498 + L1MA6 LINE L1 6013 6193 -107 1 1339 434 300 38 23 chrX 98956852 98956985 -67693311 + ID_B1 SINE B4 86 220 -4 1 1339 248 280 78 26 chrX 98957084 98957161 -67693135 + ID SINE ID 5 85 -139 1 1339 240 179 12 49 chrX 98957165 98957247 -67693049 + (CAAA)n Simple_repeat Simple_repeat 3 81 0 1 1339 476 278 38 32 chrX 98957417 98957652 -67692644 + B4 SINE B4 1 271 -21 1 1339 252 122 0 0 chrX 98957652 98957693 -67692603 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1339 1361 80 11 0 chrX 98957756 98957932 -67692364 - B2_Mm1t SINE B2 -14 179 2 1 1339 763 249 52 0 chrX 98957959 98958152 -67692144 - B3 SINE B2 -9 207 5 1 1339 480 207 133 18 chrX 98958208 98958321 -67691975 + ID_B1 SINE B4 91 216 -8 1 1339 244 319 137 97 chrX 98958662 98958888 -67691408 + MamGypLTR1c LTR Gypsy 508 742 -61 1 1339 2942 126 0 2 chrX 98958897 98959312 -67690984 + MTC LTR MaLR 8 421 0 1 167 294 250 14 0 chrX 98959315 98959387 -67690909 - B3A SINE B2 -58 140 68 1 1340 225 0 0 0 chrX 98959484 98959509 -67690787 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1340 27 62 0 0 chrX 98959576 98959624 -67690672 + AT_rich Low_complexity Low_complexity 1 48 0 1 1340 329 194 92 55 chrX 98959624 98959733 -67690563 + PB1D10 SINE Alu 5 117 0 1 1340 512 241 8 51 chrX 98959744 98959862 -67690434 + PB1D9 SINE Alu 3 115 -5 1 1340 255 132 52 117 chrX 98959912 98959925 -67690371 + ID4 SINE ID 2 73 -10 1 1340 264 131 62 47 chrX 98959925 98959989 -67690307 + tRNA-Ala-GCY_ tRNA tRNA 3 67 -8 1 1340 198 0 0 0 chrX 98959991 98960013 -67690283 + (CAAAC)n Simple_repeat Simple_repeat 1 22 0 1 1340 416 293 8 8 chrX 98960018 98960135 -67690161 + PB1D10 SINE Alu 1 117 0 1 1340 359 367 0 0 chrX 98960815 98960924 -67689372 + PB1D10 SINE Alu 4 112 -5 1 1340 405 275 71 100 chrX 98960845 98960936 -67689360 + MT2B LTR ERVL 75 159 -442 1 1340 965 139 7 0 chrX 98960936 98961080 -67689216 + B1_Mus1 SINE Alu 2 146 -2 1 1340 242 267 128 37 chrX 98961945 98962054 -67688242 + MIRb SINE MIR 50 168 -100 1 1340 504 213 18 53 chrX 98962788 98962902 -67687394 - PB1D10 SINE Alu 0 117 8 1 1340 284 229 66 0 chrX 98962849 98962910 -67687386 - B4A SINE B4 -146 146 82 1 1340 426 239 35 91 chrX 98963122 98963265 -67687031 - ID_B1 SINE B4 -84 140 6 1 1340 286 250 17 0 chrX 98963342 98963402 -67686894 - PB1 SINE Alu -66 61 1 1 1340 272 341 78 0 chrX 98963463 98963630 -67686666 + YREP_Mm Unknown Unknown 117 296 -1516 1 1340 650 231 30 0 chrX 98963527 98963661 -67686635 - ID_B1 SINE B4 -16 208 71 1 1340 201 74 0 0 chrX 98963674 98963701 -67686595 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1340 551 250 8 31 chrX 98963701 98963829 -67686467 - ID_B1 SINE B4 -7 217 93 1 1340 331 338 27 54 chrX 98963829 98963848 -67686448 - B1_Mur4 SINE Alu -7 143 1 1 1340 372 280 40 0 chrX 98964613 98964713 -67685583 - ID_B1 SINE B4 -117 107 4 1 1340 565 251 179 125 chrX 98965320 98965688 -67684608 - MLT1B LTR MaLR 0 390 3 1 1340 268 312 9 21 chrX 98965769 98965889 -67684407 - MIR3 SINE MIR -79 197 82 1 1340 401 267 19 19 chrX 98966472 98966579 -67683717 - RSINE1 SINE B4 -57 108 2 1 1340 878 274 4 56 chrX 98966577 98966809 -67683487 - ID_B1 SINE B4 -1 223 4 1 1340 1041 108 0 0 chrX 98967329 98967477 -67682819 - B1_Mus1 SINE Alu 0 148 1 1 1340 620 247 6 40 chrX 98967477 98967508 -67682788 - ID SINE ID -148 76 52 1 1340 369 253 25 0 chrX 98967606 98967685 -67682611 + ID4_ SINE ID 3 83 0 1 1340 1233 43 0 0 chrX 98967749 98967890 -67682406 - B1_Mm SINE Alu -5 142 2 1 1340 783 59 0 0 chrX 98967890 98967991 -67682305 + (TTTTC)n Simple_repeat Simple_repeat 2 102 0 1 1340 517 187 121 8 chrX 98967991 98968115 -67682181 - B1_Mur2 SINE Alu -10 139 2 1 1340 242 278 135 62 chrX 98968301 98968397 -67681899 - PB1D10 SINE Alu -1 116 14 1 1340 466 220 57 97 chrX 98968428 98968513 -67681783 + RLTR14 LTR ERV1 4 79 -303 1 1340 3491 98 58 24 chrX 98968513 98969047 -67681249 + Lx2A1 LINE L1 6457 7008 0 1 1340 466 239 38 62 chrX 98969047 98969263 -67681033 + RLTR14 LTR ERV1 80 382 0 1 1340 4380 185 67 74 chrX 98969264 98970280 -67680016 + RLTR14-int LTR ERV1 2 1010 -4307 1 1340 3806 80 30 20 chrX 98970304 98970842 -67679454 - Lx3_Mus LINE L1 0 7009 6467 1 1340 10377 124 36 62 chrX 98970919 98971944 -67678352 - RLTR22_Mur LTR ERVK 0 1848 819 1 1340 1303 109 16 0 chrX 98971944 98972128 -67678168 + B2_Mm2 SINE B2 2 188 -7 1 1340 10377 124 36 62 chrX 98972128 98972814 -67677482 - RLTR22_Mur LTR ERVK -1030 818 181 1 1340 1230 54 0 0 chrX 98972814 98972961 -67677335 - B1_Mus1 SINE Alu 0 148 2 1 1340 10377 124 36 62 chrX 98972961 98973124 -67677172 - RLTR22_Mur LTR ERVK -1668 180 24 1 1340 7411 149 60 116 chrX 98973128 98974761 -67675535 + RLTR14-int LTR ERV1 1191 2732 -2585 1 1340 1359 175 31 31 chrX 98974763 98975023 -67675273 - RLTR26 LTR ERVK 0 642 383 1 1340 608 61 0 125 chrX 98975023 98975135 -67675161 + L1_Mus1 LINE L1 6456 6553 -14 1 1340 738 171 0 0 chrX 98975135 98975252 -67675044 + RLTR14-int LTR ERV1 3066 3182 -2135 1 1340 1024 80 105 53 chrX 98975252 98975423 -67674873 - B2_Mm2 SINE B2 -2 193 14 1 1340 7465 147 41 36 chrX 98975427 98976732 -67673564 + RLTR14-int LTR ERV1 3172 4482 -835 1 1340 1392 167 18 79 chrX 98976732 98976856 -67673440 + RLTR14 LTR ERV1 120 232 -150 1 1340 800 176 49 0 chrX 98976856 98976998 -67673298 - B1_Mur4 SINE Alu 0 150 2 1 1340 1392 167 18 79 chrX 98976998 98977153 -67673143 + RLTR14 LTR ERV1 233 382 0 1 1340 262 256 3 144 chrX 98977377 98977484 -67672812 + PB1D10 SINE Alu 1 97 -53 1 1340 360 0 0 0 chrX 98977494 98977534 -67672762 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1340 252 0 0 0 chrX 98977534 98977561 -67672735 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1340 786 252 6 6 chrX 98977746 98977906 -67672390 - RSINE1 SINE B4 -4 161 2 1 1340 222 286 45 45 chrX 98978231 98978297 -67671999 + ID4_ SINE ID 14 79 -4 1 1340 830 194 0 11 chrX 98978302 98978484 -67671812 + GA-rich Low_complexity Low_complexity 1 180 0 1 1340 285 226 16 0 chrX 98978610 98978672 -67671624 + PB1D7 SINE Alu 1 63 -57 1 1340 436 309 0 73 chrX 98979024 98979174 -67671122 + ID_B1 SINE B4 86 224 0 1 1340 387 0 0 0 chrX 98979178 98979221 -67671075 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1340 225 351 0 0 chrX 98979818 98979895 -67670401 + L1MC4 LINE L1 7796 7872 -170 1 1340 742 238 12 12 chrX 98980086 98980248 -67670048 + B3A SINE B2 2 163 -35 1 1340 555 243 156 11 chrX 98980738 98980917 -67669379 - B3 SINE B2 -3 213 9 1 1340 929 59 0 0 chrX 98980956 98981075 -67669221 + B1_Mm SINE Alu 29 147 0 1 1340 396 0 0 0 chrX 98981102 98981146 -67669150 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 1340 777 290 46 5 chrX 98981152 98981346 -67668950 - ID_B1 SINE B4 -19 205 4 1 1340 24 0 0 0 chrX 98981467 98981491 -67668805 + AT_rich Low_complexity Low_complexity 1 24 0 1 1340 226 279 90 127 chrX 98981492 98981553 -67668743 - B2_Mm2 SINE B2 -12 183 127 1 1340 462 65 0 0 chrX 98981553 98981615 -67668681 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 1340 219 36 0 0 chrX 98981615 98981642 -67668654 + (GA)n Simple_repeat Simple_repeat 1 28 0 1 1340 488 214 121 18 chrX 98981642 98981768 -67668528 - B3A SINE B2 -60 138 2 1 1340 737 266 59 42 chrX 98981768 98981992 -67668304 - B4A SINE B4 -60 232 5 1 1340 505 348 75 0 chrX 98982030 98982217 -67668079 + ID_B1 SINE B4 8 208 -16 1 1340 641 242 42 37 chrX 98982247 98982436 -67667860 + B3A SINE B2 9 198 0 1 1340 298 299 26 0 chrX 98982454 98982531 -67667765 - PB1D10 SINE Alu -29 88 10 1 1340 210 271 0 0 chrX 98984099 98984147 -67666149 + B4 SINE B4 42 89 -203 1 1340 1165 89 44 11 chrX 98984147 98984329 -67665967 + B2_Mm2 SINE B2 3 190 -5 1 1340 329 120 36 12 chrX 98984401 98984485 -67665811 + CT-rich Low_complexity Low_complexity 1 86 0 1 1340 766 68 6 170 chrX 98985379 98985538 -67664758 + B1_Mus2 SINE Alu 1 133 -14 1 1340 531 229 42 21 chrX 98985638 98985781 -67664515 + URR1A DNA MER1_type 81 226 0 1 1340 261 0 0 0 chrX 98986246 98986275 -67664021 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 1340 228 146 41 20 chrX 98986629 98986678 -67663618 + LTR81B LTR ERV1? 124 173 -1220 1 1340 222 148 0 0 chrX 98988154 98988208 -67662088 + (AGGGGG)n Simple_repeat Simple_repeat 3 56 0 1 1340 544 308 0 0 chrX 98988592 98988761 -67661535 + (CAG)n Simple_repeat Simple_repeat 1 169 0 1 1340 195 129 0 0 chrX 98989678 98989709 -67660587 + (CCG)n Simple_repeat Simple_repeat 1 31 0 1 1340 228 146 41 20 chrX 98992999 98993048 -67657248 - LTR81B LTR ERV1? -1220 173 124 1 1340 261 0 0 0 chrX 98993402 98993431 -67656865 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1340 531 229 42 21 chrX 98993886 98994029 -67656267 - URR1A DNA MER1_type 0 226 81 1 1340 543 99 11 32 chrX 98994129 98994223 -67656073 - B1_Mus2 SINE Alu -14 133 42 1 1340 243 85 0 130 chrX 98994175 98994229 -67656067 - 4.5SRNA scRNA scRNA -8 86 40 1 1340 423 34 0 33 chrX 98994293 98994354 -67655942 - B1_Mus2 SINE Alu -88 59 1 1 1340 329 120 36 12 chrX 98995248 98995332 -67654964 + GA-rich Low_complexity Low_complexity 1 86 0 1 1340 1165 89 44 11 chrX 98995404 98995586 -67654710 - B2_Mm2 SINE B2 -5 190 3 1 1340 210 271 0 0 chrX 98995586 98995634 -67654662 - B4 SINE B4 -203 89 42 1 1340 801 237 23 37 chrX 98997339 98997554 -67652742 + B3 SINE B2 5 216 0 1 1340 976 184 117 0 chrX 98998534 98998730 -67651566 - URR1B DNA MER1_type -6 219 1 1 1340 353 200 41 21 chrX 98998840 98998937 -67651359 + Lx6 LINE L1 7357 7455 -5 1 1340 369 302 17 8 chrX 98998942 98999062 -67651234 - L1MB1 LINE L1 -140 6028 5908 1 1340 495 283 76 67 chrX 98999064 98999283 -67651013 - B3A SINE B2 -9 207 3 1 1340 343 322 57 41 chrX 98999285 98999531 -67650765 - L1MB3 LINE L1 -275 5908 5659 1 1340 746 215 30 59 chrX 98999542 98999745 -67650551 - B3A SINE B2 0 198 2 1 1340 23 0 0 0 chrX 98999756 98999779 -67650517 + AT_rich Low_complexity Low_complexity 1 23 0 1 1340 843 207 24 0 chrX 98999836 99000000 -67650296 - B3 SINE B2 0 216 49 1 1340 277 188 0 0 chrX 99000000 99000048 -67650248 - B3A SINE B2 -150 48 1 1 1340 476 217 47 80 chrX 99000095 99000245 -67650051 - B1F SINE Alu 0 149 5 2 1340 351 284 16 41 chrX 99000258 99000379 -67649917 - PB1D9 SINE Alu -1 119 2 3 1340 295 121 333 18 chrX 99000398 99000506 -67649790 - B2_Mm2 SINE B2 -7 188 47 4 1340 1243 91 23 0 chrX 99000553 99000728 -67649568 - B2_Mm1t SINE B2 -14 179 1 5 1340 950 230 5 5 chrX 99000746 99000951 -67649345 - B3 SINE B2 0 216 12 6 1340 427 276 172 6 chrX 99000990 99001147 -67649149 - B3A SINE B2 -15 183 1 7 1340 493 185 57 70 chrX 99001168 99001289 -67649007 - L1MA8 LINE L1 -21 6270 6154 8 1340 737 145 22 0 chrX 99001289 99001427 -67648869 - Lx4A LINE L1 0 7058 6918 9 1340 493 185 57 70 chrX 99001427 99001462 -67648834 - L1MA8 LINE L1 -138 6153 6116 8 1340 309 251 61 71 chrX 99001479 99001676 -67648620 - L1MA6 LINE L1 -6 6294 6100 1 1340 335 248 76 0 chrX 99002223 99002328 -67647968 - L1MA6 LINE L1 -160 6140 6028 1 1340 2989 43 0 0 chrX 99002582 99002928 -67647368 - ORR1A1 LTR MaLR 0 346 1 1 1340 28 61 0 0 chrX 99003023 99003072 -67647224 + AT_rich Low_complexity Low_complexity 1 49 0 1 1340 25 0 0 0 chrX 99003687 99003712 -67646584 + AT_rich Low_complexity Low_complexity 1 25 0 1 1340 395 158 0 13 chrX 99003712 99003789 -67646507 - B1_Mur3 SINE Alu -6 143 68 1 1340 4082 268 68 96 chrX 99004087 99006494 -67643802 - L1_Mur3 LINE L1 -380 5500 3160 1 1340 1388 321 57 31 chrX 99006483 99006600 -67643696 - Lx8 LINE L1 -2 7471 7347 1 1340 207 0 0 0 chrX 99006600 99006623 -67643673 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 1340 1388 321 57 31 chrX 99006623 99007084 -67643212 - Lx8 LINE L1 -127 7346 6879 1 1340 180 0 0 0 chrX 99009112 99009132 -67641164 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1340 1334 193 123 24 chrX 99009343 99009683 -67640613 + ORR1D1 LTR MaLR 1 374 0 2 1340 803 143 6 140 chrX 99010465 99010636 -67639660 + B1_Mus1 SINE Alu 1 148 0 2 1340 2435 119 14 14 chrX 99011341 99011708 -67638588 - ORR1B2 LTR MaLR 0 367 1 2 1340 708 193 37 7 chrX 99011733 99011863 -67638433 + B1_Mur2 SINE Alu 2 136 -13 2 1340 270 0 0 0 chrX 99011863 99011893 -67638403 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 1340 1009 263 44 40 chrX 99012106 99012379 -67637917 - Lx6 LINE L1 -240 7220 6947 2 1340 681 207 172 0 chrX 99012401 99012570 -67637726 - Lx6 LINE L1 -630 6830 6633 2 1340 423 0 0 0 chrX 99013823 99013870 -67636426 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1340 306 0 0 0 chrX 99015095 99015129 -67635167 + (CTGGGG)n Simple_repeat Simple_repeat 3 36 0 2 1340 246 156 0 0 chrX 99015749 99015813 -67634483 + (CTGGGG)n Simple_repeat Simple_repeat 6 69 0 2 1340 588 143 0 0 chrX 99018266 99018364 -67631932 + (TC)n Simple_repeat Simple_repeat 2 99 0 2 1340 15107 159 105 80 chrX 99018420 99025098 -67625198 - Lx LINE L1 -32 6622 476 3 1340 694 295 88 18 chrX 99025601 99025943 -67624353 + MER82 DNA MER2_type 87 452 -201 3 1340 864 197 90 10 chrX 99026178 99026378 -67623918 - B3 SINE B2 0 216 1 3 1340 488 218 0 52 chrX 99026388 99026504 -67623792 - PB1D10 SINE Alu -2 115 6 3 1340 250 261 77 33 chrX 99026646 99026737 -67623559 - Charlie17a DNA MER1_type -90 129 35 3 1340 282 272 31 61 chrX 99026992 99027090 -67623206 - B1F SINE Alu -52 97 3 3 1340 739 223 0 0 chrX 99027114 99027262 -67623034 - B1_Mur1 SINE Alu -1 148 1 3 1340 316 312 96 35 chrX 99027309 99027538 -67622758 - L1M5 LINE L1 -760 5386 5144 3 1340 796 191 0 20 chrX 99027568 99027718 -67622578 - B1_Mur3 SINE Alu 0 149 3 3 1340 388 281 28 101 chrX 99027718 99027754 -67622542 - B4A SINE B4 -214 78 56 3 1340 881 161 0 13 chrX 99027847 99027998 -67622298 - B1_Mur4 SINE Alu 0 150 2 4 1340 235 307 13 13 chrX 99028389 99028406 -67621890 + B4 SINE B4 70 86 -206 4 1340 384 311 38 0 chrX 99028406 99028512 -67621784 + PB1D10 SINE Alu 1 110 -7 4 1340 295 317 0 12 chrX 99028519 99028602 -67621694 + ID2 SINE ID 2 83 0 4 1340 232 195 33 54 chrX 99028803 99028895 -67621401 + A-rich Low_complexity Low_complexity 1 90 0 4 1340 829 309 26 80 chrX 99029137 99029352 -67620944 - B4 SINE B4 -2 290 85 4 1340 751 211 14 0 chrX 99029352 99029494 -67620802 - B1_Mur2 SINE Alu -5 144 1 4 1340 829 309 26 80 chrX 99029494 99029580 -67620716 - B4 SINE B4 -208 84 6 4 1340 1223 235 138 9 chrX 99029733 99030051 -67620245 + ORR1E LTR MaLR 1 359 0 4 1340 1347 177 37 7 chrX 99030516 99030789 -67619507 - RMER4A LTR ERVK -180 286 6 4 1340 931 197 47 42 chrX 99030835 99031047 -67619249 + B3 SINE B2 2 214 -2 4 1340 990 307 72 80 chrX 99031054 99031925 -67618371 - L1MD LINE L1 -3119 3027 2164 5 1340 219 95 0 45 chrX 99031926 99031970 -67618326 + B3A SINE B2 100 141 -57 5 1340 273 119 0 0 chrX 99031970 99032012 -67618284 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 5 1340 704 22 0 0 chrX 99032024 99032113 -67618183 - L1Md_T LINE L1 -1 6581 6493 5 1340 255 321 82 13 chrX 99032235 99032393 -67617903 + L1MD LINE L1 3850 4018 -2128 5 1340 335 283 26 86 chrX 99032396 99032512 -67617784 + B1F2 SINE Alu 1 109 -8 5 1340 249 319 112 6 chrX 99032543 99032713 -67617583 + L1M4 LINE L1 4012 4199 -1947 5 1340 1005 38 113 8 chrX 99032715 99032848 -67617448 + B1_Mus2 SINE Alu 1 147 0 5 1340 419 285 56 78 chrX 99032854 99033124 -67617172 + L1M4 LINE L1 1078 1341 -5201 5 1340 917 143 3 9 chrX 99033183 99033351 -67616945 - ORR1D1 LTR MaLR -219 155 1 5 1340 350 329 88 9 chrX 99033435 99033650 -67616646 + Cheshire DNA MER1_type 49 280 -2140 6 1340 373 238 167 0 chrX 99033704 99033726 -67616570 + B1F SINE Alu 1 147 -2 6 1340 511 202 10 0 chrX 99033726 99033830 -67616466 + ID_B1 SINE B4 118 222 -2 6 1340 1315 236 94 9 chrX 99033849 99034199 -67616097 + L1MA9 LINE L1 5558 5937 -375 6 1340 21 36 0 0 chrX 99034291 99034319 -67615977 + AT_rich Low_complexity Low_complexity 1 28 0 6 1340 2876 3 0 0 chrX 99034326 99034642 -67615654 - L1Md_A LINE L1 0 6582 6267 6 1340 403 356 69 60 chrX 99034667 99035017 -67615279 + ORR1D2 LTR MaLR 17 369 -1 6 1340 379 206 245 43 chrX 99035063 99035251 -67615045 + L1MA9 LINE L1 6086 6311 -1 6 1340 3781 150 94 22 chrX 99035398 99036231 -67614065 - ORR1A2-int LTR MaLR -1070 893 1 6 1340 1675 61 9 0 chrX 99036231 99036462 -67613834 - ORR1A2 LTR MaLR 0 327 95 6 1340 297 64 277 0 chrX 99036463 99036510 -67613786 - Lx6 LINE L1 -771 6689 6630 6 1340 2821 153 15 61 chrX 99036507 99036940 -67613356 + Lx7 LINE L1 6835 7243 -453 6 1340 1458 78 5 0 chrX 99036940 99037132 -67613164 - B2_Mm1a SINE B2 0 193 1 7 1340 2821 153 15 61 chrX 99037132 99037221 -67613075 + Lx7 LINE L1 7244 7333 -363 6 1340 959 178 130 0 chrX 99037201 99037431 -67612865 + Lx7 LINE L1 7437 7696 0 6 1340 238 237 197 0 chrX 99037696 99037772 -67612524 - LTR16B LTR ERVL -6 456 366 7 1340 332 263 26 0 chrX 99037795 99037871 -67612425 - LTR16B LTR ERVL -219 244 167 7 1340 337 242 69 139 chrX 99037912 99038056 -67612240 + B4A SINE B4 53 186 -106 7 1340 388 247 0 0 chrX 99038088 99038169 -67612127 - ID4_ SINE ID -1 82 2 7 1340 476 279 49 32 chrX 99038216 99038401 -67611895 + MLT1L LTR MaLR 392 579 -31 7 1340 212 120 20 0 chrX 99038515 99038565 -67611731 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 7 1340 1108 61 7 52 chrX 99038579 99038734 -67611562 - B1_Mus1 SINE Alu 0 148 1 7 1340 991 226 0 10 chrX 99038788 99038994 -67611302 - B3 SINE B2 -11 205 2 7 1340 970 241 58 15 chrX 99039624 99039885 -67610411 + MLT1A0 LTR MaLR 94 365 0 7 1340 740 11 11 0 chrX 99040462 99040551 -67609745 + (TG)n Simple_repeat Simple_repeat 1 90 0 7 1340 27 0 0 0 chrX 99041537 99041564 -67608732 + AT_rich Low_complexity Low_complexity 1 27 0 8 1340 529 231 23 15 chrX 99042119 99042269 -67608027 - L2b LINE L2 0 3426 3263 8 1340 530 211 71 19 chrX 99043207 99043362 -67606934 - L1MA7 LINE L1 -4 6287 6125 8 1340 1026 155 101 25 chrX 99043366 99043565 -67606731 - B3 SINE B2 0 216 3 8 1340 234 298 0 0 chrX 99044451 99044508 -67605788 + CT-rich Low_complexity Low_complexity 3 59 0 8 1340 386 38 0 19 chrX 99044543 99044596 -67605700 + (GAAA)n Simple_repeat Simple_repeat 2 53 0 8 1340 923 106 7 0 chrX 99048240 99048382 -67601914 + (GAA)n Simple_repeat Simple_repeat 3 145 0 8 1340 574 279 7 0 chrX 99048384 99048524 -67601772 - RSINE1 SINE B4 -23 142 2 8 1340 595 222 81 7 chrX 99049489 99049625 -67600671 - Lx6 LINE L1 -779 6681 6536 8 1340 290 88 53 0 chrX 99050760 99050817 -67599479 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 8 1340 192 40 0 0 chrX 99050864 99050889 -67599407 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 8 1340 182 33 67 0 chrX 99051258 99051288 -67599008 + (TTTTTA)n Simple_repeat Simple_repeat 4 35 0 9 1340 459 0 0 0 chrX 99051293 99051344 -67598952 + (TC)n Simple_repeat Simple_repeat 2 52 0 9 1340 270 0 0 0 chrX 99051344 99051373 -67598923 + (TG)n Simple_repeat Simple_repeat 1 30 0 9 1340 612 87 19 9 chrX 99051481 99051586 -67598710 - Lx9 LINE L1 -22 7622 7517 9 1340 369 62 0 0 chrX 99051586 99051634 -67598662 + (CA)n Simple_repeat Simple_repeat 2 49 0 9 1340 1561 143 15 30 chrX 99051637 99051904 -67598392 - Lx9 LINE L1 -179 7465 7203 9 1340 302 300 0 0 chrX 99052008 99052078 -67598218 - ID4 SINE ID -12 71 2 9 1340 21 26 0 26 chrX 99052083 99052101 -67598195 + AT_rich Low_complexity Low_complexity 1 18 0 9 1340 680 235 73 7 chrX 99052101 99052251 -67598045 - RSINE1 SINE B4 -2 163 4 9 1340 21 26 0 26 chrX 99052251 99052271 -67598025 + AT_rich Low_complexity Low_complexity 1 20 0 9 1340 336 225 0 12 chrX 99052277 99052358 -67597938 - L1MA5 LINE L1 -47 6253 6174 9 1340 1142 267 74 20 chrX 99052361 99052805 -67597491 - L1MA5 LINE L1 -3 6297 5830 1 1340 269 292 56 0 chrX 99053049 99053138 -67597158 + L2a LINE L2 3298 3391 -35 1 1340 314 174 82 55 chrX 99053922 99053995 -67596301 - ID4_ SINE ID 0 83 9 1 1340 332 242 59 20 chrX 99054548 99054649 -67595647 + MIRb SINE MIR 119 223 -45 1 1340 342 302 0 17 chrX 99054717 99054835 -67595461 - PB1D10 SINE Alu -1 116 1 1 1340 243 355 0 21 chrX 99055568 99055663 -67594633 + MER5B DNA MER1_type 81 173 -5 1 1340 584 143 158 8 chrX 99056506 99056557 -67593739 - ID_B1 SINE B4 -1 223 161 1 1340 270 0 0 0 chrX 99056557 99056587 -67593709 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 1340 584 143 158 8 chrX 99056587 99056655 -67593641 - ID_B1 SINE B4 -64 160 86 1 1340 469 208 10 19 chrX 99058384 99058487 -67591809 + PB1D10 SINE Alu 9 110 -7 1 1340 242 297 11 21 chrX 99059474 99059567 -67590729 + L2c LINE L2 3294 3385 -2 1 1340 28 0 0 0 chrX 99059586 99059614 -67590682 + AT_rich Low_complexity Low_complexity 1 28 0 1 1340 824 248 79 9 chrX 99059671 99059887 -67590409 - ORR1D1 LTR MaLR -1 373 143 1 1340 374 208 117 23 chrX 99059889 99060027 -67590269 - Lx7 LINE L1 -17 7679 7556 1 1340 521 300 87 46 chrX 99060025 99060371 -67589925 + Lx7 LINE L1 6949 7308 -388 1 1340 437 178 89 44 chrX 99060401 99060536 -67589760 - ORR1D1 LTR MaLR -228 146 6 1 1340 495 0 0 0 chrX 99060686 99060741 -67589555 + (CATTT)n Simple_repeat Simple_repeat 2 56 0 1 1340 754 266 43 10 chrX 99060746 99060955 -67589341 - B3 SINE B2 0 216 1 1 1340 210 329 26 0 chrX 99061120 99061196 -67589100 - ID4_ SINE ID -3 80 3 1 1340 307 323 32 0 chrX 99061220 99061313 -67588983 - B1F SINE Alu -9 140 45 1 1340 215 306 47 39 chrX 99061482 99061611 -67588685 - MIR SINE MIR -68 194 65 1 1340 713 249 39 14 chrX 99061612 99061820 -67588476 + MTD LTR MaLR 92 304 -115 1 1340 314 206 144 52 chrX 99062313 99062410 -67587886 + PB1 SINE Alu 1 106 -21 1 1340 850 46 0 0 chrX 99062408 99062517 -67587779 + B1_Mus1 SINE Alu 34 142 -6 1 1340 423 0 0 0 chrX 99062522 99062569 -67587727 + (CAAAA)n Simple_repeat Simple_repeat 1 47 0 1 1340 431 280 194 19 chrX 99062624 99062835 -67587461 + L1M3 LINE L1 4915 5162 -984 1 1340 616 109 19 29 chrX 99062876 99062980 -67587316 + B1_Mur3 SINE Alu 47 149 0 1 1340 186 43 0 0 chrX 99063036 99063059 -67587237 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 1340 194 333 89 20 chrX 99063141 99063242 -67587054 + MIR3 SINE MIR 96 203 -5 1 1340 236 85 0 41 chrX 99063354 99063403 -67586893 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 1 1340 840 267 60 81 chrX 99063717 99063786 -67586510 - B4A SINE B4 -12 280 231 1 1340 653 263 5 49 chrX 99063786 99063990 -67586306 - B3A SINE B2 -2 196 2 1 1340 840 267 60 81 chrX 99063990 99064205 -67586091 - B4A SINE B4 -62 230 2 1 1340 239 301 60 54 chrX 99064236 99064369 -67585927 + MIR SINE MIR 2 127 -135 1 1340 375 235 38 13 chrX 99065372 99065475 -67584821 + PB1D10 SINE Alu 12 118 -2 1 1340 711 171 15 8 chrX 99065699 99065829 -67584467 + B1F2 SINE Alu 10 140 -9 1 1340 311 279 16 39 chrX 99065833 99065960 -67584336 - L1MB8 LINE L1 0 6178 6055 1 1340 826 183 0 204 chrX 99065967 99066010 -67584286 - B3A SINE B2 -7 191 155 1 1340 378 0 0 0 chrX 99066010 99066052 -67584244 + (TC)n Simple_repeat Simple_repeat 2 43 0 1 1340 234 62 0 0 chrX 99066052 99066083 -67584213 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1340 826 183 0 204 chrX 99066083 99066278 -67584018 - B3A SINE B2 -44 154 2 1 1340 1250 255 42 26 chrX 99066483 99066862 -67583434 - L1MB8 LINE L1 -522 5656 5272 1 1340 395 253 0 44 chrX 99066880 99066971 -67583325 - PB1D10 SINE Alu 0 117 31 1 1340 649 270 51 54 chrX 99066988 99067181 -67583115 - L1MB8 LINE L1 -860 5286 5084 1 1340 405 244 0 0 chrX 99067181 99067259 -67583037 + ID4 SINE ID 4 81 -2 1 1340 649 270 51 54 chrX 99067259 99067398 -67582898 - L1MB8 LINE L1 -1063 5083 4955 1 1340 204 159 23 0 chrX 99067432 99067476 -67582820 + (TAA)n Simple_repeat Simple_repeat 3 47 0 1 1340 401 345 7 28 chrX 99067510 99067653 -67582643 - RSINE1 SINE B4 -22 143 4 1 1340 557 296 14 60 chrX 99067717 99067933 -67582363 - L1MB8 LINE L1 -1321 4825 4620 1 1340 243 350 12 91 chrX 99067977 99068165 -67582131 - L2b LINE L2 -7 3380 3209 1 1340 290 225 14 14 chrX 99068366 99068438 -67581858 - L2 LINE L2 -582 2837 2766 1 1340 217 0 29 29 chrX 99068626 99068660 -67581636 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1 1340 266 222 13 53 chrX 99068759 99068835 -67581461 - MIRb SINE MIR -90 178 106 1 1340 330 328 141 16 chrX 99069494 99069686 -67580610 + MIR SINE MIR 47 262 0 1 1340 429 318 104 26 chrX 99070367 99070512 -67579784 - L2b LINE L2 -583 2836 2672 1 1340 261 75 0 0 chrX 99070512 99070552 -67579744 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1340 429 318 104 26 chrX 99070552 99070713 -67579583 - L2b LINE L2 -748 2671 2507 1 1340 308 323 108 0 chrX 99072230 99072323 -67577973 - PB1D10 SINE Alu -6 111 9 1 1340 303 267 0 13 chrX 99072353 99072429 -67577867 - ID4_ SINE ID -4 79 5 1 1340 244 236 0 18 chrX 99072521 99072577 -67577719 + Charlie15a DNA MER1_type 16 70 -154 1 1340 372 22 0 0 chrX 99072841 99072886 -67577410 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1340 848 225 99 5 chrX 99073142 99073365 -67576931 - Tigger5 DNA MER2_type 0 2406 2163 1 1340 438 293 164 49 chrX 99073360 99073586 -67576710 - Tigger5 DNA MER2_type -2154 252 1 1 1340 294 195 4 7 chrX 99074363 99074441 -67575855 - MTEa LTR MaLR -20 359 271 1 1340 280 302 201 10 chrX 99074624 99074818 -67575478 + MIR SINE MIR 31 261 -1 1 1340 1456 65 11 5 chrX 99074997 99075184 -67575112 - B2_Mm2 SINE B2 -5 190 3 1 1340 535 248 5 157 chrX 99076500 99076691 -67573605 + RSINE1 SINE B4 3 164 -1 1 1340 243 88 0 0 chrX 99076695 99076729 -67573567 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1 1340 337 302 70 16 chrX 99076766 99076894 -67573402 + B1F SINE Alu 1 135 -14 1 1340 631 209 155 0 chrX 99076922 99077051 -67573245 + B1_Mur2 SINE Alu 1 149 0 1 1340 372 286 60 30 chrX 99077162 99077328 -67572968 + MIR SINE MIR 32 202 -60 1 1340 355 250 89 77 chrX 99078134 99078213 -67572083 + MER113A DNA MER1_type 33 99 -215 1 1340 924 167 201 0 chrX 99078213 99078387 -67571909 - B3 SINE B2 -4 212 4 1 1340 355 250 89 77 chrX 99078387 99078554 -67571742 + MER113A DNA MER1_type 100 282 -32 1 1340 326 131 11 45 chrX 99078636 99078724 -67571572 + CT-rich Low_complexity Low_complexity 6 90 0 1 1340 618 260 7 7 chrX 99079193 99079340 -67570956 - B1F SINE Alu -2 147 1 1 1340 437 254 31 54 chrX 99081445 99081574 -67568722 + ID_B1 SINE B4 77 202 -22 1 1340 252 0 0 0 chrX 99082361 99082389 -67567907 + (TTG)n Simple_repeat Simple_repeat 3 30 0 1 1340 253 254 48 0 chrX 99082389 99082452 -67567844 - ID SINE ID -152 72 7 1 1340 191 314 88 22 chrX 99082621 99082758 -67567538 + MIRc SINE MIR 94 239 -29 1 1340 490 258 84 24 chrX 99082801 99082968 -67567328 - B3A SINE B2 -6 192 16 1 1340 3686 134 75 37 chrX 99082965 99083670 -67566626 - RMER13B LTR ERVK -176 732 1 1 1340 379 223 0 18 chrX 99083799 99083913 -67566383 + CT-rich Low_complexity Low_complexity 1 112 0 1 1340 227 241 19 0 chrX 99084560 99084614 -67565682 - B3A SINE B2 -136 62 8 1 1340 270 0 0 0 chrX 99084780 99084810 -67565486 + (A)n Simple_repeat Simple_repeat 1 30 0 1 1340 351 0 0 0 chrX 99085940 99085979 -67564317 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1340 4693 125 82 81 chrX 99086214 99087171 -67563125 - RMER17B LTR ERVK 0 958 1 1 1340 432 264 9 26 chrX 99087211 99087324 -67562972 + PB1D7 SINE Alu 4 114 -6 1 1340 234 43 85 0 chrX 99087336 99087383 -67562913 + (CAAA)n Simple_repeat Simple_repeat 3 53 0 1 1340 236 254 16 16 chrX 99087948 99088012 -67562284 + GA-rich Low_complexity Low_complexity 1 64 0 1 1340 903 244 131 8 chrX 99088047 99088291 -67562005 + B4A SINE B4 1 274 -18 1 1340 1480 267 87 10 chrX 99088387 99088882 -67561414 - L1MB3 LINE L1 -30 6153 5621 1 1340 514 266 80 0 chrX 99088917 99089030 -67561266 - RSINE1 SINE B4 -40 125 4 1 1340 495 211 114 0 chrX 99089033 99089156 -67561140 - B1F SINE Alu 0 149 13 1 1340 334 276 0 22 chrX 99089167 99089256 -67561040 - 5S rRNA rRNA -31 90 4 1 1340 543 241 153 29 chrX 99089262 99089471 -67560825 - L1M4 LINE L1 -560 5614 5380 1 1340 249 274 86 121 chrX 99089731 99089847 -67560449 - PB1D10 SINE Alu -5 112 1 1 167 414 318 65 56 chrX 99090256 99090547 -67559749 + MTEa LTR MaLR 61 379 0 1 1341 1834 202 32 26 chrX 99090842 99091219 -67559077 - MTEa LTR MaLR 0 379 1 1 1341 832 171 13 20 chrX 99091245 99091394 -67558902 + B1_Mur4 SINE Alu 2 149 -1 1 1341 342 0 0 0 chrX 99091470 99091508 -67558788 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1341 198 0 0 0 chrX 99091508 99091529 -67558767 + (GA)n Simple_repeat Simple_repeat 1 22 0 1 1341 635 285 128 36 chrX 99092071 99092377 -67557919 - ORR1E LTR MaLR -24 335 2 1 1341 399 275 66 16 chrX 99092448 99092562 -67557734 - ORR1E LTR MaLR 0 379 260 1 1341 2690 116 152 0 chrX 99092562 99093055 -67557241 - RMER4B LTR ERVK -1 584 17 1 1341 430 309 127 26 chrX 99093055 99093284 -67557012 - ORR1E LTR MaLR -107 252 1 1 1341 312 241 0 109 chrX 99094186 99094278 -67556018 - PB1 SINE Alu -40 109 28 1 1341 324 245 39 19 chrX 99094620 99094724 -67555572 + CT-rich Low_complexity Low_complexity 3 108 0 1 1341 555 223 9 0 chrX 99094727 99094839 -67555457 - PB1D10 SINE Alu 0 117 5 1 1341 937 204 23 45 chrX 99095546 99095585 -67554711 + B3 SINE B2 1 35 -181 1 1341 1241 92 36 46 chrX 99095585 99095779 -67554517 + B2_Mm2 SINE B2 1 192 -3 1 1341 937 204 23 45 chrX 99095779 99095960 -67554336 + B3 SINE B2 36 216 0 1 1341 207 354 60 10 chrX 99096457 99096557 -67553739 + MIR3 SINE MIR 83 187 -21 1 1341 381 22 0 0 chrX 99097190 99097236 -67553060 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1341 228 167 148 0 chrX 99097312 99097366 -67552930 + L2b LINE L2 3304 3365 -10 2 1341 247 206 184 0 chrX 99098343 99098485 -67551811 - MIRc SINE MIR -58 210 34 2 1341 872 185 0 24 chrX 99098950 99099116 -67551180 - B4 SINE B4 -10 282 121 2 1341 1038 218 62 52 chrX 99099221 99099603 -67550693 - L1MB8 LINE L1 -71 6967 6586 2 1341 293 70 54 27 chrX 99099784 99099858 -67550438 + T-rich Low_complexity Low_complexity 3 78 0 2 1341 1445 190 157 19 chrX 99099985 99100355 -67549941 + MTC LTR MaLR 1 421 0 2 1341 926 218 70 6 chrX 99100369 99100782 -67549514 - L1MB8 LINE L1 -804 6368 5929 2 1341 566 267 16 33 chrX 99100803 99100985 -67549311 - L1MB8 LINE L1 -1227 5779 5601 2 1341 1198 245 53 67 chrX 99101064 99101440 -67548856 - MTE2b LTR MaLR -8 371 1 2 1341 556 271 155 1 chrX 99101638 99101805 -67548491 - B3 SINE B2 0 198 4 2 1341 230 208 0 40 chrX 99101972 99102022 -67548274 + L1M4 LINE L1 4515 4562 -1584 2 1341 299 257 122 0 chrX 99102059 99102133 -67548163 + PB1D10 SINE Alu 6 88 -29 2 1341 360 293 29 52 chrX 99102313 99102486 -67547810 - L1MB8 LINE L1 -1420 5586 5418 2 1341 526 259 14 0 chrX 99102511 99102658 -67547638 - ID_B1 SINE B4 -2 222 74 2 1341 850 321 121 46 chrX 99103176 99103781 -67546515 - L1MB8 LINE L1 -6578 756 107 2 1341 411 300 129 10 chrX 99103883 99104092 -67546204 - L1MD3 LINE L1 -177 6156 5923 2 1341 1014 222 10 0 chrX 99104528 99104726 -67545570 + B3 SINE B2 1 200 -16 2 1341 993 55 0 0 chrX 99104726 99104854 -67545442 + (TAAA)n Simple_repeat Simple_repeat 3 130 0 2 1341 1103 248 109 109 chrX 99105555 99106089 -67544207 - L1MD3 LINE L1 -2067 5928 5395 2 1341 560 207 0 35 chrX 99106090 99106205 -67544091 - ID_B1 SINE B4 -4 220 110 2 1341 268 174 69 42 chrX 99106222 99106294 -67544002 - L1MD3 LINE L1 -935 5398 5325 2 1341 375 106 0 0 chrX 99106323 99106389 -67543907 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 1341 723 222 36 90 chrX 99106468 99106660 -67543636 - L1MD3 LINE L1 -804 5342 5158 2 1341 305 299 0 25 chrX 99106660 99106739 -67543557 - ID4_ SINE ID -2 81 5 2 1341 723 222 36 90 chrX 99106739 99106823 -67543473 - L1MD3 LINE L1 -989 5157 5081 2 1341 513 287 32 0 chrX 99106822 99106979 -67543317 + L1MC1 LINE L1 6165 6326 -7 2 1341 390 248 44 44 chrX 99106986 99107100 -67543196 - PB1D7 SINE Alu 0 120 7 2 1341 251 130 18 18 chrX 99107233 99107288 -67543008 - L1MCa LINE L1 -1115 5206 5152 2 1341 224 234 21 0 chrX 99107298 99107345 -67542951 + CT-rich Low_complexity Low_complexity 1 48 0 2 1341 2045 202 78 14 chrX 99107345 99107896 -67542400 - L1MCa LINE L1 -1194 5127 4542 2 1341 340 272 0 0 chrX 99107968 99108049 -67542247 - U6 snRNA snRNA 0 107 27 2 1341 656 241 207 36 chrX 99108053 99108358 -67541938 - L1MCa LINE L1 -1749 4572 4216 2 1341 306 296 23 0 chrX 99108363 99108451 -67541845 - PB1D10 SINE Alu -18 99 10 2 1341 324 261 45 23 chrX 99108461 99108594 -67541702 - L1MCa LINE L1 -2169 4152 4017 2 1341 350 57 19 0 chrX 99108605 99108658 -67541638 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 2 1341 348 216 130 30 chrX 99108658 99108749 -67541547 - B1F2 SINE Alu -12 137 34 2 1341 1610 237 206 8 chrX 99108749 99109284 -67541012 - L1MCa LINE L1 -2294 4027 3387 2 1341 368 146 62 0 chrX 99109324 99109420 -67540876 - Lx5 LINE L1 -3 7047 6946 2 1341 358 218 0 13 chrX 99109463 99109542 -67540754 - L1MCa LINE L1 -3340 2981 2904 2 1341 269 301 0 0 chrX 99109569 99109642 -67540654 - L1MCa LINE L1 -6213 295 223 2 1341 400 248 0 79 chrX 99109674 99109801 -67540495 - PB1 SINE Alu -2 125 9 2 1341 302 242 69 20 chrX 99109814 99109915 -67540381 - L1MCa LINE L1 -6304 204 99 2 1341 838 139 0 0 chrX 99109918 99110047 -67540249 + B2_Mm2 SINE B2 1 129 -66 2 1341 198 0 0 0 chrX 99110078 99110100 -67540196 + (TAAAA)n Simple_repeat Simple_repeat 5 26 0 2 1341 623 201 52 0 chrX 99110244 99110378 -67539918 - B1F SINE Alu -8 141 1 2 1341 543 228 206 44 chrX 99110380 99110812 -67539484 - L1M4b LINE L1 -2575 4431 3930 2 1341 312 244 0 25 chrX 99111092 99111172 -67539124 - ORR1D2 LTR MaLR 0 379 302 2 1341 1013 247 63 42 chrX 99111235 99111522 -67538774 - ORR1D2 LTR MaLR -77 293 1 2 1341 3761 269 38 58 chrX 99111522 99113060 -67537236 - ORR1D2-int LTR MaLR 0 1509 51 2 1341 1195 254 60 50 chrX 99113066 99113430 -67536866 - ORR1D2 LTR MaLR 0 370 3 2 1341 555 282 90 77 chrX 99113438 99113918 -67536378 - L1M4b LINE L1 -4262 3072 2587 2 1341 869 332 122 37 chrX 99113971 99114563 -67535733 - L1M4b LINE L1 -6682 652 11 2 1341 209 261 32 32 chrX 99115724 99115819 -67534477 + CT-rich Low_complexity Low_complexity 3 97 0 2 1341 261 348 25 113 chrX 99116116 99116247 -67534049 - Charlie8 DNA MER1_type -2204 224 101 2 1341 1319 96 6 6 chrX 99116247 99116426 -67533870 - B2_Mm1t SINE B2 -14 179 1 2 1341 261 348 25 113 chrX 99116426 99116453 -67533843 - Charlie8 DNA MER1_type -2328 100 80 2 1341 477 0 0 0 chrX 99116454 99116507 -67533789 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 1341 1140 89 0 7 chrX 99116517 99116664 -67533632 - B1_Mus2 SINE Alu -1 146 1 2 1341 745 249 57 0 chrX 99116695 99116872 -67533424 + B3A SINE B2 2 188 -10 2 1341 502 256 96 0 chrX 99117009 99117134 -67533162 + B1F SINE Alu 1 137 -12 2 1341 423 0 0 0 chrX 99117134 99117181 -67533115 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 1341 1534 233 41 52 chrX 99117226 99117593 -67532703 - ORR1D2 LTR MaLR -7 363 1 2 1341 840 214 36 18 chrX 99118559 99118778 -67531518 + L1M4 LINE L1 4977 5199 -947 2 1341 736 210 78 49 chrX 99118781 99119026 -67531270 + L1MA4 LINE L1 3498 3749 -2394 2 1341 247 304 0 48 chrX 99119083 99119166 -67531130 + B1F SINE Alu 71 149 0 2 1341 493 258 31 12 chrX 99119167 99119328 -67530968 + L1MA4 LINE L1 5779 5942 -358 2 1341 258 32 0 0 chrX 99119531 99119562 -67530734 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 2 1341 299 294 76 84 chrX 99119562 99119681 -67530615 + B1F SINE Alu 27 144 -5 2 1341 353 304 0 0 chrX 99119703 99119782 -67530514 + PB1D10 SINE Alu 10 88 -29 2 1341 647 174 0 35 chrX 99119779 99119892 -67530404 + B3 SINE B2 89 197 -19 2 1341 222 37 0 0 chrX 99120022 99120049 -67530247 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1341 932 17 168 0 chrX 99120052 99120171 -67530125 - B1_Mus1 SINE Alu -6 142 4 2 1341 237 232 18 0 chrX 99120173 99120229 -67530067 + L1M4 LINE L1 5414 5470 -701 2 1341 378 0 0 0 chrX 99120232 99120274 -67530022 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 1341 399 56 0 0 chrX 99120274 99120327 -67529969 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1341 749 213 12 35 chrX 99120327 99120497 -67529799 - RMER10B LTR ERVL -48 350 185 2 1341 270 0 0 0 chrX 99120591 99120621 -67529675 + (CAGCC)n Simple_repeat Simple_repeat 4 33 0 2 1341 1487 279 54 81 chrX 99120621 99120974 -67529322 + L1MB8 LINE L1 5463 5809 -369 2 1341 506 238 76 15 chrX 99120974 99121106 -67529190 + B1F1 SINE Alu 1 140 -9 2 1341 1487 279 54 81 chrX 99121106 99121458 -67528838 + L1MB8 LINE L1 5810 6149 -29 2 1341 417 109 0 0 chrX 99121511 99121575 -67528721 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 2 1341 740 223 0 28 chrX 99122191 99122334 -67527962 - ID_B1 SINE B4 -7 217 79 2 1341 257 306 22 97 chrX 99122226 99122360 -67527936 - MT2B LTR ERVL -344 257 134 2 1341 272 355 132 0 chrX 99122373 99122494 -67527802 - MIRb SINE MIR -4 264 128 2 1341 275 250 13 26 chrX 99123822 99123900 -67526396 + ID4_ SINE ID 17 93 -59 2 1341 278 270 0 119 chrX 99126552 99126636 -67523660 - Charlie8 DNA MER1_type -2353 75 5 2 1341 613 231 63 42 chrX 99126713 99126903 -67523393 - B3A SINE B2 -4 194 1 2 1341 1268 98 5 42 chrX 99126968 99127159 -67523137 - B2_Mm1t SINE B2 -9 184 1 2 1341 186 103 0 0 chrX 99127213 99127242 -67523054 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 2 1341 469 181 34 5 chrX 99127270 99127372 -67522924 + B1F SINE Alu 16 117 0 2 1341 283 300 0 100 chrX 99127398 99127498 -67522798 - PB1D10 SINE Alu -27 90 1 2 1341 203 288 58 75 chrX 99127498 99127618 -67522678 - L2c LINE L2 -9 3378 3261 2 1341 280 258 22 33 chrX 99128139 99128231 -67522065 - MTEa LTR MaLR -11 368 278 2 1341 422 330 120 46 chrX 99128458 99128807 -67521489 + L2a LINE L2 2429 2803 -616 2 1341 529 332 115 20 chrX 99128902 99129293 -67521003 + L2a LINE L2 2994 3421 -5 2 1341 285 227 0 4 chrX 99129420 99129503 -67520793 + MIR SINE MIR 81 165 -111 2 1341 411 21 0 0 chrX 99129688 99129736 -67520560 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1341 242 276 26 26 chrX 99129744 99129822 -67520474 + ID4_ SINE ID 2 79 -4 2 1341 317 273 68 61 chrX 99129878 99130026 -67520270 + B1F SINE Alu 1 149 0 2 1341 294 292 69 0 chrX 99130032 99130104 -67520192 + ID SINE ID 3 79 -145 2 1341 198 0 0 0 chrX 99130104 99130126 -67520170 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 1341 360 0 0 0 chrX 99130706 99130746 -67519550 + (GA)n Simple_repeat Simple_repeat 1 40 0 2 1341 351 0 0 0 chrX 99131248 99131287 -67519009 + (TCCA)n Simple_repeat Simple_repeat 4 42 0 2 1341 281 300 0 0 chrX 99131386 99131446 -67518850 - ID_B1 SINE B4 0 224 165 2 1341 181 282 158 66 chrX 99131781 99131857 -67518439 + L2b LINE L2 3293 3375 0 2 1341 413 303 70 67 chrX 99131911 99132226 -67518070 + L2c LINE L2 3063 3378 -9 2 1341 326 230 68 0 chrX 99132230 99132304 -67517992 + ID4_ SINE ID 3 81 -2 2 1341 407 278 19 0 chrX 99132371 99132479 -67517817 + MER63C DNA AcHobo 2 111 -819 2 1341 239 170 0 0 chrX 99132481 99132534 -67517762 + L1MD3 LINE L1 7480 7532 -350 2 1341 539 274 62 0 chrX 99132539 99132718 -67517578 + L1MD3 LINE L1 7734 7923 -72 2 1341 850 295 116 17 chrX 99132753 99133098 -67517198 + MER63C DNA AcHobo 50 428 -502 2 1341 255 184 53 0 chrX 99133147 99133223 -67517073 + GA-rich Low_complexity Low_complexity 3 82 0 2 1341 586 286 82 13 chrX 99133223 99133601 -67516695 + MER63C DNA AcHobo 416 821 -109 2 1341 286 275 43 0 chrX 99133809 99133878 -67516418 - MIRb SINE MIR -90 178 107 2 1341 419 176 14 0 chrX 99133924 99133998 -67516298 - MLT1D LTR MaLR -2 503 429 2 1341 1015 54 0 37 chrX 99134003 99134126 -67516170 + B1_Mus1 SINE Alu 18 140 -8 2 1341 765 0 0 0 chrX 99134126 99134211 -67516085 + (GAAA)n Simple_repeat Simple_repeat 2 86 0 2 1341 1015 54 0 37 chrX 99134211 99134222 -67516074 + B1_Mus1 SINE Alu 141 147 -1 2 1341 249 333 25 51 chrX 99134244 99134323 -67515973 - B4A SINE B4 -214 78 2 2 1341 781 209 71 52 chrX 99134578 99134790 -67515506 - Lx8 LINE L1 -377 7096 6881 2 1341 296 304 37 25 chrX 99135204 99135285 -67515011 - RSINE1 SINE B4 -3 162 81 2 1341 627 354 33 5 chrX 99135401 99135614 -67514682 + MER102c DNA MER1_type 102 320 -11 2 1341 344 190 37 37 chrX 99135775 99135857 -67514439 - B3 SINE B2 -4 212 131 2 1341 217 279 29 0 chrX 99135933 99136001 -67514295 - MIRb SINE MIR -83 185 116 2 1341 354 45 0 0 chrX 99137129 99137173 -67513123 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1341 360 265 38 29 chrX 99137477 99137582 -67512714 + MIRc SINE MIR 44 149 -119 2 1341 318 262 45 30 chrX 99138637 99138856 -67511440 - Tigger7 DNA MER2_type -88 2403 2242 2 1341 497 238 37 30 chrX 99139508 99139642 -67510654 - RLTR14 LTR ERV1 -20 362 228 2 1341 202 321 35 58 chrX 99140387 99140473 -67509823 + L2a LINE L2 3110 3196 -191 2 1341 310 302 109 18 chrX 99141099 99141264 -67509032 - MIRb SINE MIR -36 232 53 2 1341 23 0 0 0 chrX 99142320 99142343 -67507953 + AT_rich Low_complexity Low_complexity 1 23 0 3 1341 419 264 0 5 chrX 99142353 99142467 -67507829 + PB1D10 SINE Alu 1 124 -3 3 1341 1110 303 12 0 chrX 99142467 99142718 -67507578 + Lx5 LINE L1 6712 6965 -85 3 1341 303 28 0 0 chrX 99142732 99142768 -67507528 + (TTAA)n Simple_repeat Simple_repeat 3 38 0 3 1341 519 309 54 47 chrX 99142882 99143140 -67507156 - LTR33 LTR ERVL -251 264 5 3 1341 395 278 156 34 chrX 99143219 99143424 -67506872 + L2a LINE L2 3196 3425 -1 2 1341 353 227 27 0 chrX 99143910 99143985 -67506311 - ID4_ SINE ID -5 78 2 3 1341 530 184 128 54 chrX 99144468 99144617 -67505679 - RSINE1 SINE B4 -4 161 2 3 1341 2377 230 19 47 chrX 99144949 99145051 -67505245 - L1MD1 LINE L1 -282 5960 5865 3 1341 1010 114 153 107 chrX 99145051 99145175 -67505121 + URR1A DNA MER1_type 1 157 -69 3 1341 1233 42 0 0 chrX 99145175 99145318 -67504978 + B1_Mus1 SINE Alu 1 143 -5 3 1341 1010 114 153 107 chrX 99145318 99145409 -67504887 + URR1A DNA MER1_type 158 226 0 3 1341 2377 230 20 43 chrX 99145409 99146148 -67504148 - L1MD1 LINE L1 -378 5864 5138 3 1341 370 269 0 46 chrX 99146157 99146266 -67504030 - PB1D10 SINE Alu 0 117 14 3 1341 1219 61 0 0 chrX 99146392 99146539 -67503757 + B1_Mus2 SINE Alu 1 147 0 3 1341 299 222 70 10 chrX 99146617 99146717 -67503579 - L1MD1 LINE L1 -2556 3590 3485 3 1341 24 0 0 0 chrX 99146727 99146751 -67503545 + AT_rich Low_complexity Low_complexity 1 24 0 3 1341 237 316 10 10 chrX 99147712 99147811 -67502485 - L1MC LINE L1 -1499 4647 4549 3 1341 626 184 87 93 chrX 99148932 99149082 -67501214 - B1_Mur2 SINE Alu 0 149 1 3 1341 180 288 0 106 chrX 99149279 99149345 -67500951 + MIRb SINE MIR 2 60 -208 3 1341 322 250 0 0 chrX 99150256 99150328 -67499968 - ID4 SINE ID -11 72 1 3 1341 247 304 91 0 chrX 99150511 99150598 -67499698 + L2a LINE L2 3278 3423 -3 3 1341 225 0 0 0 chrX 99151625 99151650 -67498646 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1341 212 271 21 0 chrX 99152007 99152055 -67498241 - PB1D7 SINE Alu -11 109 61 3 1341 532 224 120 12 chrX 99152480 99152647 -67497649 - ID_B1 SINE B4 -5 219 35 3 1341 203 311 45 72 chrX 99153043 99153154 -67497142 + MIR SINE MIR 46 153 -55 3 1341 237 114 0 0 chrX 99154004 99154039 -67496257 - ID4 SINE ID -21 62 28 3 1341 243 243 71 80 chrX 99154227 99154339 -67495957 - MIRm SINE MIR -87 189 79 3 1341 1147 256 77 22 chrX 99154383 99154706 -67495590 + Charlie4a DNA MER1_type 149 489 -19 3 1341 1219 55 0 0 chrX 99155255 99155401 -67494895 + B1_Mus2 SINE Alu 2 147 0 3 1341 499 186 68 10 chrX 99155708 99155811 -67494485 - PB1D10 SINE Alu -5 112 4 3 1341 383 239 26 26 chrX 99157458 99157574 -67492722 - PB1D10 SINE Alu 0 117 2 3 1341 417 39 0 0 chrX 99157862 99157913 -67492383 + (TC)n Simple_repeat Simple_repeat 1 51 0 3 1341 333 0 0 0 chrX 99157913 99157949 -67492347 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1341 207 69 0 0 chrX 99158983 99159012 -67491284 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 1341 354 278 37 62 chrX 99159534 99159695 -67490601 - L1ME3 LINE L1 0 6162 6006 3 1341 384 299 29 77 chrX 99159744 99159779 -67490517 - MER63B DNA AcHobo -2 434 396 3 1341 198 0 0 0 chrX 99159779 99159801 -67490495 + (TG)n Simple_repeat Simple_repeat 2 23 0 3 1341 384 299 29 77 chrX 99159801 99159935 -67490361 - MER63B DNA AcHobo -41 395 273 3 1341 1739 245 53 13 chrX 99159959 99160356 -67489940 + Lx6 LINE L1 6948 7360 -100 3 1341 1472 251 31 47 chrX 99160672 99161056 -67489240 - MTE2b LTR MaLR -1 378 1 3 1341 301 320 22 79 chrX 99161079 99161218 -67489078 - Tigger7 DNA MER2_type -1 2490 2360 3 1341 858 285 88 15 chrX 99161361 99161635 -67488661 - ORR1E LTR MaLR -65 294 1 3 1341 1137 263 11 19 chrX 99161635 99161878 -67488418 - ORR1E-int LTR MaLR -53 1527 1287 3 1341 1547 259 71 21 chrX 99161878 99162398 -67487898 - L1MD2 LINE L1 -514 6236 5691 3 1341 563 182 7 110 chrX 99162401 99162537 -67487759 - B1_Mur2 SINE Alu -1 148 27 3 1341 1002 208 52 0 chrX 99162634 99162826 -67487470 - B3 SINE B2 0 216 15 3 1341 625 167 79 0 chrX 99162815 99162929 -67487367 - URR1B DNA MER1_type -20 205 83 3 1341 395 261 115 0 chrX 99162987 99163144 -67487152 - L1MD2 LINE L1 -926 5611 5437 3 1341 275 185 169 0 chrX 99163294 99163359 -67486937 - PB1 SINE Alu -19 108 33 3 1341 326 291 17 81 chrX 99163380 99163481 -67486815 - L1MD2 LINE L1 -1162 5375 5282 3 1341 3620 18 0 0 chrX 99163481 99163877 -67486419 + MTA_Mm LTR MaLR 1 396 0 3 1341 9923 13 0 0 chrX 99163877 99164974 -67485322 + MTA_Mm-int LTR MaLR 1 1097 -1 3 1341 3538 23 2 0 chrX 99164975 99165370 -67484926 + MTA_Mm LTR MaLR 1 396 0 3 1341 326 291 17 81 chrX 99165370 99165437 -67484859 - L1MD2 LINE L1 -1256 5281 5216 3 1341 410 226 80 8 chrX 99165436 99165561 -67484735 - L1MD2 LINE L1 -1545 4992 4859 3 1341 638 173 125 35 chrX 99165622 99165766 -67484530 - ID_B1 SINE B4 -6 218 62 3 1341 563 270 76 88 chrX 99165790 99166088 -67484208 - L1MD2 LINE L1 -1741 4796 4486 3 1341 233 351 0 0 chrX 99166088 99166165 -67484131 + ID2 SINE ID 3 79 -4 3 1341 563 270 76 88 chrX 99166165 99166207 -67484089 - L1MD2 LINE L1 -2052 4485 4460 3 1341 237 222 0 0 chrX 99166677 99166731 -67483565 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1341 1311 57 103 0 chrX 99166764 99166939 -67483357 - B2_Mm2 SINE B2 -2 193 1 3 1341 436 248 169 7 chrX 99166948 99167102 -67483194 - L1MD2 LINE L1 -4470 2163 1985 3 1341 2309 78 3 3 chrX 99167103 99167411 -67482885 - L1_Mus1 LINE L1 0 6567 6260 3 1341 435 240 56 17 chrX 99167482 99167708 -67482588 - L1MD2 LINE L1 -5005 1535 1299 3 1341 313 225 35 81 chrX 99167745 99167759 -67482537 - ID4 SINE ID 0 83 1 3 1341 314 236 41 14 chrX 99167759 99167832 -67482464 - ID SINE ID -149 75 1 3 1341 255 278 158 0 chrX 99167849 99167982 -67482314 - L1MD2 LINE L1 -5340 1293 1140 3 1341 612 200 108 0 chrX 99168275 99168395 -67481901 + B1F SINE Alu 10 142 -7 3 1341 371 300 110 50 chrX 99168816 99169016 -67481280 - L1ME3B LINE L1 -183 6057 5846 3 1341 998 116 68 0 chrX 99170378 99170524 -67479772 - B2_Mm2 SINE B2 -39 156 1 3 1341 540 208 6 80 chrX 99170532 99170708 -67479588 - ORR1C2 LTR MaLR 0 384 220 3 1341 254 206 47 16 chrX 99170730 99170794 -67479502 - MTEa LTR MaLR -38 341 276 3 1341 1479 217 27 82 chrX 99170892 99171293 -67479003 + MTEa LTR MaLR 1 379 0 3 1341 24 0 0 0 chrX 99171328 99171352 -67478944 + GC_rich Low_complexity Low_complexity 1 24 0 3 1341 847 144 0 0 chrX 99171356 99171481 -67478815 - B1_Mus2 SINE Alu -18 129 5 3 1341 537 111 40 0 chrX 99171718 99171817 -67478479 - Lx3A LINE L1 -5 6976 6874 3 1341 183 211 105 0 chrX 99171825 99171863 -67478433 - MIR SINE MIR -171 91 50 3 1341 258 194 58 29 chrX 99171904 99171973 -67478323 - ID SINE ID -153 71 1 3 1341 374 250 125 0 chrX 99172022 99172118 -67478178 - PB1D10 SINE Alu -9 108 1 3 1341 205 324 67 13 chrX 99172453 99172528 -67477768 - L2c LINE L2 -29 3358 3280 3 1341 846 123 0 0 chrX 99172675 99172797 -67477499 + B1_Mur2 SINE Alu 18 139 -10 3 1341 667 288 35 0 chrX 99173700 99173870 -67476426 - MTEa LTR MaLR 0 379 204 3 1341 295 321 18 39 chrX 99173911 99174075 -67476221 + MIRb SINE MIR 77 234 -34 3 1341 452 263 63 95 chrX 99175278 99175404 -67474892 + MTEa LTR MaLR 1 122 -257 3 1341 188 279 16 32 chrX 99175404 99175467 -67474829 - MIR SINE MIR -173 89 28 3 1341 423 56 0 0 chrX 99175498 99175552 -67474744 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1341 297 0 0 0 chrX 99175552 99175584 -67474712 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 1341 358 273 72 9 chrX 99176474 99176585 -67473711 - MIR SINE MIR -11 251 134 3 1341 568 168 9 38 chrX 99176585 99176690 -67473606 + B1_Mur2 SINE Alu 42 143 -6 3 1341 252 313 152 0 chrX 99177330 99177429 -67472867 + MER91A DNA Tip100 1 114 -82 3 1341 811 219 58 5 chrX 99178360 99178548 -67471748 + B3A SINE B2 1 198 0 3 1341 775 92 263 19 chrX 99178583 99178739 -67471557 + B2_Mm2 SINE B2 2 195 0 3 1341 993 56 32 96 chrX 99180640 99180797 -67469499 + B1_Mus1 SINE Alu 2 148 0 3 1341 575 171 9 28 chrX 99180815 99180923 -67469373 + B1F2 SINE Alu 42 147 -2 3 1341 183 42 0 0 chrX 99181597 99181621 -67468675 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 3 1341 317 241 0 57 chrX 99181684 99181772 -67468524 - ID4 SINE ID 0 83 1 3 1341 256 253 144 33 chrX 99181729 99181819 -67468477 - ZP3AR Satellite Satellite -74 138 39 3 1341 980 223 25 51 chrX 99183354 99183580 -67466716 + B4A SINE B4 4 223 -69 3 1341 1023 234 10 0 chrX 99183580 99183772 -67466524 + B3 SINE B2 3 196 -20 3 1341 230 273 73 0 chrX 99183788 99183843 -67466453 + B4A SINE B4 234 292 0 3 1341 719 236 0 26 chrX 99184119 99184271 -67466025 - B1_Mur2 SINE Alu -1 148 1 3 1341 250 321 25 0 chrX 99184282 99184297 -67465999 - ID SINE ID -139 85 3 3 1341 279 288 0 0 chrX 99184297 99184363 -67465933 - ID4 SINE ID -15 68 3 3 1341 607 276 0 33 chrX 99184380 99184560 -67465736 + L1M5 LINE L1 5548 5721 -403 3 1341 757 250 96 5 chrX 99184560 99184757 -67465539 + B3 SINE B2 1 215 -1 3 1341 517 242 8 48 chrX 99184765 99184891 -67465405 + B3A SINE B2 1 121 -77 3 1341 413 225 1 3 chrX 99184899 99184980 -67465316 - B3A SINE B2 -84 109 29 3 1341 418 196 3 0 chrX 99185019 99185103 -67465193 + BC1_Mm scRNA scRNA 3 87 -65 3 1341 1238 276 73 61 chrX 99185308 99185798 -67464498 + Charlie1a DNA MER1_type 215 710 -745 3 1341 583 102 34 0 chrX 99186640 99186728 -67463568 - B2_Mm2 SINE B2 0 195 105 3 1341 313 28 0 0 chrX 99186762 99186798 -67463498 + HAL1-3A_ME LINE L1 1977 2012 -846 3 1341 1227 68 25 0 chrX 99186798 99186960 -67463336 - B2_Mm2 SINE B2 -29 166 1 3 1341 243 188 43 14 chrX 99187064 99187134 -67463162 + CT-rich Low_complexity Low_complexity 5 76 0 3 1341 308 270 76 0 chrX 99187135 99187246 -67463050 - B1_Mus1 SINE Alu 0 117 1 3 1341 480 282 98 71 chrX 99187258 99187284 -67463012 - B3A SINE B2 0 198 179 3 1341 471 18 0 0 chrX 99187284 99187340 -67462956 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 1341 480 282 98 71 chrX 99187340 99187496 -67462800 - B3A SINE B2 -20 178 11 3 1341 208 176 0 0 chrX 99188061 99188095 -67462201 + MIRc SINE MIR 88 121 -147 3 1341 283 336 70 8 chrX 99188229 99188358 -67461938 + MIRc SINE MIR 2 138 -130 4 1341 261 83 0 0 chrX 99188358 99188394 -67461902 + (TCC)n Simple_repeat Simple_repeat 1 36 0 4 1341 907 78 0 0 chrX 99188394 99188510 -67461786 - B1_Mm SINE Alu -31 116 1 4 1341 269 321 24 18 chrX 99188510 99188568 -67461728 - ORR1B1-int LTR MaLR -862 647 589 4 1341 204 40 0 0 chrX 99188571 99188596 -67461700 + (TTTC)n Simple_repeat Simple_repeat 4 28 0 4 1341 779 233 129 0 chrX 99188622 99188815 -67461481 + ID_B1 SINE B4 7 224 0 4 1341 305 281 0 68 chrX 99188822 99188925 -67461371 + ID_B1 SINE B4 128 223 -1 4 1341 648 0 0 0 chrX 99188973 99189045 -67461251 + (GGAA)n Simple_repeat Simple_repeat 1 72 0 4 1341 311 341 31 54 chrX 99189804 99189934 -67460362 + MIRc SINE MIR 31 157 -111 4 1341 508 272 28 139 chrX 99190108 99190360 -67459936 + ID_B1 SINE B4 1 224 0 4 1341 1214 49 0 0 chrX 99190366 99190508 -67459788 + B1_Mm SINE Alu 2 143 -4 4 1341 341 0 45 0 chrX 99190508 99190552 -67459744 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 4 1341 270 362 12 0 chrX 99190552 99190632 -67459664 + ID4_ SINE ID 2 82 -1 4 1341 253 336 36 38 chrX 99190734 99190919 -67459377 + L2a LINE L2 2934 3117 -309 4 1341 183 80 0 0 chrX 99191100 99191125 -67459171 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 4 1341 565 211 18 18 chrX 99191218 99191329 -67458967 - PB1D9 SINE Alu 0 120 10 4 1341 275 299 43 117 chrX 99191251 99191414 -67458882 - MT2B LTR ERVL -357 244 94 4 1341 529 228 59 12 chrX 99191433 99191602 -67458694 + Charlie7a DNA MER1_type 50 226 -46 4 1341 299 277 11 57 chrX 99192572 99192660 -67457636 - RSINE1 SINE B4 -15 150 67 4 1341 555 283 72 0 chrX 99192642 99192780 -67457516 + ORR1D2 LTR MaLR 122 269 -101 4 1341 230 51 0 49 chrX 99192783 99192824 -67457472 + (TTG)n Simple_repeat Simple_repeat 3 41 0 4 1341 501 139 0 14 chrX 99192909 99192982 -67457314 - tRNA-Glu-GAG_ tRNA tRNA -3 72 1 4 1341 896 196 0 7 chrX 99192987 99193136 -67457160 - B1_Mur1 SINE Alu -1 148 1 4 1341 538 243 0 0 chrX 99193139 99193246 -67457050 + ORR1D2 LTR MaLR 264 370 0 4 1341 234 0 0 0 chrX 99194254 99194280 -67456016 + (CAAAAA)n Simple_repeat Simple_repeat 6 31 0 4 1341 1149 53 4 2 chrX 99194642 99194801 -67455495 - B2_Mm2 SINE B2 -8 185 25 4 1341 198 103 0 0 chrX 99194965 99194994 -67455302 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 4 1341 1251 288 80 76 chrX 99195635 99196185 -67454111 - Tigger7 DNA MER2_type 0 2491 1940 4 1341 1290 230 84 48 chrX 99196172 99196271 -67454025 - Tigger7 DNA MER2_type -1496 995 894 4 1341 327 284 0 0 chrX 99196271 99196352 -67453944 + ID4 SINE ID 1 81 -2 4 1341 1290 226 269 38 chrX 99196352 99196779 -67453517 - Tigger7 DNA MER2_type -1598 893 367 4 1341 1416 200 155 22 chrX 99196978 99197346 -67452950 - MTD LTR MaLR -2 417 1 4 1341 1100 176 48 10 chrX 99197808 99198014 -67452282 - B3 SINE B2 -2 214 1 4 1341 243 0 0 0 chrX 99198633 99198660 -67451636 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 4 1341 512 106 12 0 chrX 99200093 99200178 -67450118 + (GA)n Simple_repeat Simple_repeat 2 87 0 4 1341 453 36 0 0 chrX 99200317 99200372 -67449924 + (GGA)n Simple_repeat Simple_repeat 2 56 0 4 1341 296 281 70 8 chrX 99203020 99203149 -67447147 + MER113A DNA MER1_type 46 182 -132 4 1341 335 329 44 60 chrX 99203311 99203560 -67446736 + L2c LINE L2 2920 3164 -223 4 1341 675 344 9 22 chrX 99203635 99203861 -67446435 - ID_B1 SINE B4 -1 223 1 4 1341 255 358 96 20 chrX 99204532 99204729 -67445567 - MIRb SINE MIR -24 244 33 4 1341 515 333 127 16 chrX 99205515 99205838 -67444458 - ORR1E LTR MaLR 0 359 1 4 1341 1198 55 0 7 chrX 99206223 99206370 -67443926 - B1_Mus2 SINE Alu 0 147 2 4 1341 893 126 0 29 chrX 99206706 99206845 -67443451 + B1_Mur3 SINE Alu 15 149 0 4 1341 916 192 140 10 chrX 99206916 99207116 -67443180 + URR1A DNA MER1_type 1 226 0 4 1341 290 87 0 21 chrX 99207129 99207176 -67443120 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1341 810 120 0 0 chrX 99207200 99207325 -67442971 + (GAAA)n Simple_repeat Simple_repeat 4 128 0 4 1341 378 261 13 74 chrX 99208468 99208665 -67441631 - L1MA4 LINE L1 -368 5929 5749 4 1341 4134 40 0 0 chrX 99210861 99211342 -67438954 + L1Md_T LINE L1 6102 6582 0 4 1341 311 241 195 0 chrX 99211357 99211444 -67438852 + PB1D10 SINE Alu 1 104 -13 4 1341 189 242 79 16 chrX 99211476 99211539 -67438757 - MER5B DNA MER1_type -34 144 78 4 1341 342 0 0 0 chrX 99213499 99213537 -67436759 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1341 208 281 11 68 chrX 99214040 99214128 -67436168 + L3 LINE CR1 4103 4185 -304 4 1341 180 337 72 0 chrX 99214192 99214275 -67436021 + L3 LINE CR1 4280 4368 -121 4 1341 304 292 87 28 chrX 99215128 99215276 -67435020 - MIRb SINE MIR -53 215 38 4 1341 498 271 102 47 chrX 99215457 99215585 -67434711 - PB1D10 SINE Alu -2 148 13 4 1341 219 301 97 0 chrX 99215518 99215611 -67434685 - B4A SINE B4 -125 167 66 4 1341 195 292 81 45 chrX 99215715 99215826 -67434470 + MIR3 SINE MIR 69 183 -25 4 1341 1138 238 65 34 chrX 99216057 99216379 -67433917 + MER113 DNA MER1_type 33 364 -157 4 1341 37 39 0 0 chrX 99216506 99216557 -67433739 + AT_rich Low_complexity Low_complexity 1 51 0 4 1341 515 88 0 74 chrX 99216648 99216736 -67433560 - B1_Mur1 SINE Alu 0 149 45 4 1341 210 37 0 0 chrX 99216736 99216763 -67433533 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 1341 385 252 8 98 chrX 99216763 99216806 -67433490 - PB1D9 SINE Alu -76 44 1 4 1341 534 232 88 0 chrX 99216812 99216937 -67433359 - ID_B1 SINE B4 -3 221 86 4 1341 180 0 0 0 chrX 99216939 99216959 -67433337 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 1341 438 20 0 0 chrX 99216959 99217009 -67433287 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1341 377 357 70 13 chrX 99217020 99217176 -67433120 + B4A SINE B4 105 269 -23 4 1341 267 239 0 0 chrX 99217176 99217243 -67433053 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 1341 21 0 0 0 chrX 99217275 99217296 -67433000 + AT_rich Low_complexity Low_complexity 1 21 0 4 1341 771 208 14 0 chrX 99217297 99217441 -67432855 + B1_Mm SINE Alu 1 146 -1 4 1341 25 51 0 0 chrX 99217451 99217490 -67432806 + AT_rich Low_complexity Low_complexity 1 39 0 4 1341 601 306 157 56 chrX 99218165 99218521 -67431775 - LTR16A LTR ERVL -56 395 4 4 1341 348 286 50 16 chrX 99218627 99218748 -67431548 + B1F SINE Alu 23 147 -2 4 1341 279 196 0 0 chrX 99218757 99218803 -67431493 + ID4 SINE ID 3 48 -35 4 1341 26 50 0 0 chrX 99219737 99219777 -67430519 + AT_rich Low_complexity Low_complexity 1 40 0 4 1341 678 277 0 0 chrX 99219792 99219933 -67430363 - RSINE1 SINE B4 -22 143 3 4 1341 522 214 23 16 chrX 99220606 99220734 -67429562 - LTR37B LTR ERV1 0 468 340 4 1341 958 251 131 15 chrX 99220741 99221000 -67429296 + B4A SINE B4 2 290 -2 4 1341 996 196 51 5 chrX 99221086 99221281 -67429015 + B3 SINE B2 1 204 -12 4 167 1115 268 86 8 chrX 99221299 99221671 -67428625 + L1MB5 LINE L1 5590 5990 -184 4 1342 264 333 102 15 chrX 99221671 99221808 -67428488 + RMER12 LTR ERVK 702 850 -472 4 1342 554 259 54 7 chrX 99221798 99221946 -67428350 - RSINE1 SINE B4 0 165 11 4 1342 270 319 76 0 chrX 99221954 99222073 -67428223 + L1MB5 LINE L1 6004 6131 -49 4 1342 385 187 31 33 chrX 99222090 99222228 -67428068 + B3A SINE B2 3 180 -18 4 1342 562 280 7 47 chrX 99222226 99222356 -67427940 + B3 SINE B2 69 199 -17 4 1342 425 19 19 0 chrX 99222356 99222410 -67427886 + (GGA)n Simple_repeat Simple_repeat 3 57 0 4 1342 562 280 7 47 chrX 99222410 99222429 -67427867 + B3 SINE B2 200 212 -4 4 1342 208 77 51 0 chrX 99222804 99222843 -67427453 + (TCCC)n Simple_repeat Simple_repeat 2 42 0 4 1342 818 257 27 23 chrX 99222847 99223066 -67427230 - ID_B1 SINE B4 -1 223 4 4 1342 896 145 0 6 chrX 99223527 99223687 -67426609 + CT-rich Low_complexity Low_complexity 2 160 0 4 1342 470 248 40 54 chrX 99223723 99223872 -67426424 - B1_Mus2 SINE Alu 0 147 1 4 1342 331 277 10 21 chrX 99224087 99224183 -67426113 - Lx8 LINE L1 -228 7245 7151 4 1342 372 203 14 0 chrX 99224281 99224350 -67425946 - B3A SINE B2 -128 70 1 4 1342 309 316 13 6 chrX 99224392 99224551 -67425745 - L1M2 LINE L1 -860 5283 5124 4 1342 671 201 37 7 chrX 99224562 99224697 -67425599 - B3 SINE B2 0 216 78 4 1342 913 229 71 20 chrX 99224698 99224731 -67425565 - B3 SINE B2 -9 207 171 4 1342 297 0 0 0 chrX 99224731 99224764 -67425532 + (TATG)n Simple_repeat Simple_repeat 2 34 0 4 1342 913 229 71 20 chrX 99224764 99224926 -67425370 - B3 SINE B2 -46 170 3 4 1342 302 206 29 14 chrX 99225704 99225773 -67424523 + ID4_ SINE ID 1 70 -13 4 1342 579 237 0 17 chrX 99225910 99226030 -67424266 - PB1D7 SINE Alu -2 118 1 4 1342 736 275 91 12 chrX 99226111 99226365 -67423931 - B4A SINE B4 -14 278 5 4 1342 248 277 99 72 chrX 99226422 99226574 -67423722 + L1M5 LINE L1 5760 5915 -325 4 1342 252 0 0 0 chrX 99227730 99227758 -67422538 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1342 219 309 32 27 chrX 99228110 99228226 -67422070 + MIRb SINE MIR 115 229 -33 4 1342 750 196 0 7 chrX 99228240 99228379 -67421917 + B1F SINE Alu 1 138 -11 4 1342 804 21 0 0 chrX 99228379 99228473 -67421823 + (GGAAA)n Simple_repeat Simple_repeat 2 95 0 4 1342 279 320 69 23 chrX 99228476 99228607 -67421689 - L2b LINE L2 0 3375 3239 4 1342 737 180 14 28 chrX 99228678 99228821 -67421475 - B1_Mur1 SINE Alu -7 142 2 4 1342 226 173 0 37 chrX 99228933 99228987 -67421309 + C-rich Low_complexity Low_complexity 5 56 0 4 1342 186 304 30 74 chrX 99229126 99229261 -67421035 - L2b LINE L2 -701 2718 2590 4 1342 205 211 0 37 chrX 99230626 99230680 -67419616 + GA-rich Low_complexity Low_complexity 2 53 0 5 1342 363 240 71 20 chrX 99231109 99231207 -67419089 - PB1D10 SINE Alu -10 107 5 5 1342 254 282 0 124 chrX 99231227 99231316 -67418980 - ID4_ SINE ID -4 79 2 5 1342 467 273 53 8 chrX 99231321 99231454 -67418842 - B1F SINE Alu -6 143 5 5 1342 326 213 66 13 chrX 99231534 99231610 -67418686 - ID4 SINE ID -2 81 2 5 1342 490 230 211 19 chrX 99231985 99232193 -67418103 - MER33 DNA MER1_type -76 248 1 5 1342 1027 101 86 29 chrX 99234004 99234178 -67416118 + B2_Mm2 SINE B2 3 186 -9 5 1342 1520 63 0 35 chrX 99234985 99235183 -67415113 + B2_Mm1t SINE B2 2 192 -1 5 1342 480 110 0 14 chrX 99235324 99235398 -67414898 - B1_Mus2 SINE Alu 0 147 75 5 1342 944 180 111 5 chrX 99235406 99235596 -67414700 - B3 SINE B2 -6 210 1 5 1342 1030 274 134 13 chrX 99235871 99236244 -67414052 + Charlie4a DNA MER1_type 84 501 -7 5 1342 1167 162 25 5 chrX 99236251 99236449 -67413847 + B3 SINE B2 4 205 -11 5 1342 1191 164 28 37 chrX 99236472 99236687 -67413609 + B3 SINE B2 1 213 -3 5 1342 22 0 0 0 chrX 99236687 99236709 -67413587 + AT_rich Low_complexity Low_complexity 1 22 0 5 1342 577 209 23 25 chrX 99237256 99237388 -67412908 - B1F1 SINE Alu 0 149 25 5 1342 585 0 0 0 chrX 99238174 99238239 -67412057 + (GA)n Simple_repeat Simple_repeat 2 66 0 5 1342 260 248 186 107 chrX 99238262 99238402 -67411894 + MT2B2 LTR ERVL 90 240 -344 5 1342 441 232 37 0 chrX 99238332 99238414 -67411882 + B1F1 SINE Alu 13 97 -52 5 1342 283 200 169 0 chrX 99238448 99238513 -67411783 + ID4 SINE ID 8 83 0 5 1342 459 162 115 48 chrX 99238533 99238637 -67411659 - PB1D7 SINE Alu 0 120 10 5 1342 256 293 37 75 chrX 99238568 99238675 -67411621 - B4A SINE B4 -125 167 65 5 1342 267 291 9 46 chrX 99239194 99239302 -67410994 - MIRm SINE MIR -115 161 58 5 1342 21 0 0 0 chrX 99239666 99239687 -67410609 + AT_rich Low_complexity Low_complexity 1 21 0 5 1342 232 298 1 1 chrX 99239737 99239820 -67410476 + L2a LINE L2 3020 3101 -274 5 1342 231 349 60 12 chrX 99239856 99239940 -67410356 + L2a LINE L2 3338 3425 -1 5 1342 239 285 70 81 chrX 99239919 99240069 -67410227 - MIR SINE MIR -14 254 104 5 1342 921 178 135 0 chrX 99240144 99240329 -67409967 - B3 SINE B2 -6 210 1 5 1342 797 139 140 37 chrX 99241737 99241901 -67408395 + B2_Mm2 SINE B2 1 181 -14 5 1342 573 186 20 0 chrX 99241993 99242095 -67408201 - B1_Mur4 SINE Alu -37 113 10 5 1342 403 169 200 11 chrX 99242148 99242238 -67408058 + PB1D7 SINE Alu 1 107 -13 5 1342 342 0 0 0 chrX 99242367 99242405 -67407891 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 1342 374 272 251 6 chrX 99242602 99242765 -67407531 + MIRb SINE MIR 52 254 -14 5 1342 196 279 23 0 chrX 99242730 99242773 -67407523 + L2c LINE L2 3335 3378 -9 5 1342 274 296 133 23 chrX 99242776 99242904 -67407392 + MER5B DNA MER1_type 33 174 -4 5 1342 471 18 0 0 chrX 99243150 99243206 -67407090 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1342 261 318 0 86 chrX 99243236 99243254 -67407042 + MT2B2 LTR ERVL 149 156 -428 5 1342 542 227 0 18 chrX 99243254 99243366 -67406930 + PB1D10 SINE Alu 3 112 -5 5 1342 464 312 178 35 chrX 99243505 99244002 -67406294 - L2a LINE L2 0 3426 2823 5 1342 968 266 71 33 chrX 99244017 99244437 -67405859 - L1MB7 LINE L1 -15 6169 5734 5 1342 721 200 93 7 chrX 99244442 99244697 -67405599 - ORR1D2 LTR MaLR -8 362 1 5 1342 289 245 87 40 chrX 99244703 99244889 -67405407 - L1MB7 LINE L1 -570 5614 5379 5 1342 421 301 42 7 chrX 99244889 99245033 -67405263 - B1F2 SINE Alu 0 149 1 5 1342 289 245 100 374 chrX 99245033 99245048 -67405248 - L1MB7 LINE L1 -786 5378 5364 5 1342 1043 183 66 0 chrX 99245051 99245248 -67405048 - B3 SINE B2 -4 212 3 5 1342 299 229 44 44 chrX 99245252 99245366 -67404930 - L1MB7 LINE L1 -845 5301 5188 5 1342 1284 224 64 32 chrX 99245372 99245718 -67404578 - Lx8 LINE L1 0 7473 7117 5 1342 467 234 6 76 chrX 99245722 99245879 -67404417 - L1MB7 LINE L1 -943 5203 5058 5 1342 202 306 69 0 chrX 99246241 99246313 -67403983 + MIR3 SINE MIR 84 160 -48 5 1342 273 289 187 39 chrX 99246923 99247078 -67403218 - LTR16A LTR ERVL -269 182 5 5 1342 352 264 16 20 chrX 99247133 99247260 -67403036 - ID4 SINE ID -15 137 12 5 1342 186 276 68 17 chrX 99247498 99247557 -67402739 - MIR SINE MIR -171 91 30 5 1342 493 331 22 0 chrX 99248153 99248289 -67402007 + MER5A DNA MER1_type 1 139 -50 5 1342 453 284 162 15 chrX 99248303 99248439 -67401857 + MIR SINE MIR 17 172 -90 5 1342 225 0 0 0 chrX 99248439 99248464 -67401832 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 1342 2096 249 122 48 chrX 99249577 99249876 -67400420 - L1MB7 LINE L1 -10 6174 5879 5 1342 4343 21 0 0 chrX 99249876 99250361 -67399935 - L1Md_A LINE L1 -1 6581 6097 5 1342 2096 249 122 48 chrX 99250361 99250718 -67399578 - L1MB7 LINE L1 -306 5878 5471 5 1342 207 0 0 0 chrX 99250718 99250741 -67399555 + (TTG)n Simple_repeat Simple_repeat 3 25 0 5 1342 2096 261 142 37 chrX 99250741 99251412 -67398884 - L1MB7 LINE L1 -714 5470 4709 5 1342 243 0 0 0 chrX 99251412 99251439 -67398857 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1342 1609 266 150 33 chrX 99251439 99251681 -67398615 - L1MB7 LINE L1 -1438 4708 4448 5 1342 1417 76 16 0 chrX 99251683 99251868 -67398428 - B2_Mm2 SINE B2 -7 188 1 5 1342 1405 79 32 0 chrX 99251868 99252057 -67398239 - MTB_Mm LTR MaLR -212 195 1 5 1342 919 143 14 0 chrX 99252086 99252233 -67398063 - B1_Mur1 SINE Alu 0 149 1 5 1342 362 314 78 96 chrX 99252336 99252566 -67397730 - RSINE1 SINE B4 -6 286 78 5 1342 384 59 0 0 chrX 99252570 99252621 -67397675 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 5 1342 897 156 0 0 chrX 99252623 99252758 -67397538 - B1_Mur4 SINE Alu 0 150 16 5 1342 306 343 95 0 chrX 99253004 99253109 -67397187 - PB1 SINE Alu -2 125 11 5 1342 453 261 138 0 chrX 99253195 99253325 -67396971 - L1MB7 LINE L1 -1872 4274 4127 5 1342 672 248 40 0 chrX 99253330 99253479 -67396817 - ORR1E LTR MaLR 0 359 205 5 1342 258 229 39 51 chrX 99253641 99253785 -67396511 - RLTR11A LTR ERVK -320 221 87 5 1342 1025 199 9 33 chrX 99253961 99254174 -67396122 - ORR1E LTR MaLR -151 208 1 5 1342 1204 264 98 60 chrX 99254175 99254779 -67395517 - L1MB7 LINE L1 -2019 4127 3501 5 1342 549 250 161 0 chrX 99254837 99254961 -67395335 - B3 SINE B2 -4 212 69 5 1342 543 188 20 0 chrX 99254973 99255074 -67395222 - ORR1C1 LTR MaLR -275 103 1 5 1342 584 260 16 8 chrX 99255076 99255204 -67395092 - RSINE1 SINE B4 -35 130 2 5 1342 686 232 30 25 chrX 99255205 99255408 -67394888 - L1MB7 LINE L1 -2706 3440 3237 5 1342 576 0 0 0 chrX 99256227 99256291 -67394005 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 1342 1072 277 112 62 chrX 99256568 99257007 -67393289 + Charlie4a DNA MER1_type 20 480 -28 5 1342 465 225 24 20 chrX 99257104 99257229 -67393067 - B1F SINE Alu 0 117 3 5 1342 436 232 79 14 chrX 99257251 99257368 -67392928 - PB1D10 SINE Alu 0 149 6 5 1342 201 217 31 77 chrX 99258592 99258657 -67391639 + polypyrimidine Low_complexity Low_complexity 3 64 0 5 1342 442 296 9 0 chrX 99258657 99258764 -67391532 - PB1 SINE Alu -91 220 22 5 1342 234 324 49 28 chrX 99258781 99258924 -67391372 - L2c LINE L2 -313 3074 2929 5 1342 204 40 0 0 chrX 99262045 99262070 -67388226 + (CCCCCA)n Simple_repeat Simple_repeat 2 26 0 5 1342 494 195 0 19 chrX 99264899 99265056 -67385240 + CT-rich Low_complexity Low_complexity 1 154 0 5 1342 231 36 0 0 chrX 99265933 99265961 -67384335 + (TCC)n Simple_repeat Simple_repeat 2 29 0 5 1342 337 164 194 0 chrX 99267247 99267314 -67382982 + ID4 SINE ID 4 83 0 5 1342 280 330 28 44 chrX 99267559 99267740 -67382556 + L3 LINE CR1 4123 4300 -189 5 1342 631 158 8 58 chrX 99268129 99268250 -67382046 + PB1D10 SINE Alu 2 116 -1 5 1342 1293 227 103 9 chrX 99269839 99270168 -67380128 - MTE2b LTR MaLR 0 379 20 5 1342 270 306 71 18 chrX 99270909 99271022 -67379274 + B1F2 SINE Alu 3 121 -28 5 1342 214 333 16 0 chrX 99271017 99271080 -67379216 + ID SINE ID 12 75 -149 5 1342 183 321 0 18 chrX 99271239 99271296 -67379000 - MER5B DNA MER1_type -122 56 1 5 1342 608 172 63 32 chrX 99271926 99272052 -67378244 + B1F2 SINE Alu 15 144 -5 5 1342 253 262 17 0 chrX 99272144 99272219 -67378077 + MIR SINE MIR 190 267 -1 5 1342 190 259 121 0 chrX 99272637 99272695 -67377601 + MIRc SINE MIR 80 144 -124 5 1342 1148 270 14 29 chrX 99275720 99275995 -67374301 - B4A SINE B4 -21 271 1 5 1342 391 264 47 9 chrX 99276004 99276111 -67374185 - PB1D10 SINE Alu -6 111 1 5 1342 831 210 79 34 chrX 99276113 99276379 -67373917 - L1MB2 LINE L1 -42 6129 5852 5 1342 357 206 0 40 chrX 99276656 99276732 -67373564 + ID4 SINE ID 1 73 -10 5 1342 320 338 89 20 chrX 99276779 99276981 -67373315 + MIRc SINE MIR 11 226 -42 5 1342 603 205 23 8 chrX 99280114 99280242 -67370054 + B1_Mur1 SINE Alu 1 130 -19 5 1342 201 250 0 0 chrX 99283097 99283141 -67367155 + MER5A DNA MER1_type 1 44 -145 5 1342 247 204 37 0 chrX 99283143 99283197 -67367099 + GA-rich Low_complexity Low_complexity 5 60 0 5 1342 417 284 123 12 chrX 99283997 99284178 -67366118 - MIR3 SINE MIR -6 202 7 5 1342 192 77 0 0 chrX 99285048 99285074 -67365222 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 1342 421 280 11 103 chrX 99285091 99285266 -67365030 - MER58C DNA MER1_type 0 215 57 5 1342 460 276 51 32 chrX 99285328 99285485 -67364811 + RSINE1 SINE B4 2 161 -4 5 1342 437 34 17 0 chrX 99285633 99285692 -67364604 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 1342 854 122 7 0 chrX 99286390 99286529 -67363767 + (TC)n Simple_repeat Simple_repeat 1 140 0 5 1342 381 93 0 0 chrX 99287234 99287288 -67363008 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 5 1342 399 252 43 35 chrX 99288241 99288356 -67361940 + PB1D10 SINE Alu 1 116 -1 6 1342 676 112 35 7 chrX 99288394 99288538 -67361758 + CT-rich Low_complexity Low_complexity 4 151 0 6 1342 505 246 25 0 chrX 99288538 99288660 -67361636 - B1_Mur1 SINE Alu 0 149 25 6 1342 521 278 16 8 chrX 99288885 99289012 -67361284 + RSINE1 SINE B4 23 150 -15 6 1342 255 234 44 0 chrX 99289448 99289514 -67360782 + ID4 SINE ID 26 97 -55 6 1342 261 0 0 0 chrX 99289950 99289979 -67360317 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 1342 234 295 22 170 chrX 99290186 99290268 -67360028 - LTR16A LTR ERVL -336 115 42 6 1342 1870 125 113 18 chrX 99290268 99290603 -67359693 - ORR1D1 LTR MaLR -3 371 5 6 1342 234 295 22 170 chrX 99290603 99290655 -67359641 - LTR16A LTR ERVL -410 41 2 6 1342 211 375 19 0 chrX 99291021 99291125 -67359171 - L2b LINE L2 -5 3370 3265 6 1342 286 306 59 30 chrX 99291673 99291774 -67358522 + PB1D10 SINE Alu 1 104 -13 6 1342 186 43 0 0 chrX 99291780 99291803 -67358493 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1342 485 275 42 0 chrX 99291819 99291939 -67358357 + PB1 SINE Alu 1 125 -2 6 1342 306 257 96 51 chrX 99291997 99292048 -67358248 + L1ME3B LINE L1 5825 5874 -366 6 1342 995 244 14 5 chrX 99292048 99292262 -67358034 + ID_B1 SINE B4 3 218 -6 6 1342 249 98 0 0 chrX 99292271 99292312 -67357984 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1342 306 257 96 51 chrX 99292312 99292447 -67357849 + L1ME3B LINE L1 5881 6030 -210 6 1342 214 308 14 58 chrX 99292465 99292534 -67357762 + PB1D10 SINE Alu 18 83 -34 6 1342 324 221 9 103 chrX 99292597 99292713 -67357583 + MT2B LTR ERVL 154 258 -343 6 1342 795 133 67 0 chrX 99292614 99292749 -67357547 + B1_Mur4 SINE Alu 7 150 0 6 1342 965 206 43 33 chrX 99292790 99293001 -67357295 + ID_B1 SINE B4 8 220 -4 6 1342 261 0 0 0 chrX 99293003 99293032 -67357264 + (TA)n Simple_repeat Simple_repeat 2 30 0 6 1342 292 277 0 0 chrX 99293087 99293152 -67357144 + ID_B1 SINE B4 79 143 -81 6 1342 1432 217 56 9 chrX 99293187 99293526 -67356770 - ORR1D2 LTR MaLR -15 355 1 6 1342 1247 54 0 0 chrX 99293590 99293738 -67356558 + B1_Mus1 SINE Alu 1 148 0 6 1342 211 258 159 16 chrX 99293760 99293823 -67356473 + B1F2 SINE Alu 1 72 -77 6 1342 443 48 16 0 chrX 99293994 99294056 -67356240 + (TG)n Simple_repeat Simple_repeat 1 63 0 6 1342 235 162 66 26 chrX 99294057 99294133 -67356163 + (TGGG)n Simple_repeat Simple_repeat 1 79 0 6 1342 429 186 5 9 chrX 99294133 99294352 -67355944 + (TG)n Simple_repeat Simple_repeat 1 217 0 6 1342 397 184 0 26 chrX 99294354 99294432 -67355864 - ID4_ SINE ID -6 77 2 6 1342 297 0 0 0 chrX 99294547 99294580 -67355716 + (GGGA)n Simple_repeat Simple_repeat 3 35 0 6 1342 192 77 0 0 chrX 99294790 99294816 -67355480 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1342 236 329 38 50 chrX 99295192 99295352 -67354944 + L2 LINE L2 2648 2805 -614 6 1342 294 29 0 0 chrX 99295529 99295564 -67354732 + (CATA)n Simple_repeat Simple_repeat 2 36 0 6 1342 186 344 0 0 chrX 99295927 99295988 -67354308 - MIR SINE MIR -65 197 137 6 1342 998 189 32 0 chrX 99296524 99296709 -67353587 - MTE2b LTR MaLR -17 362 172 6 1342 530 219 70 0 chrX 99297012 99297126 -67353170 - MTE2b LTR MaLR -198 181 60 6 1342 313 304 0 11 chrX 99297124 99297217 -67353079 - MTE2b LTR MaLR -287 92 1 6 1342 397 321 34 41 chrX 99297470 99297616 -67352680 + RSINE1 SINE B4 20 164 -1 6 1342 1190 274 216 42 chrX 99297621 99298150 -67352146 - MTE-int LTR MaLR -184 1396 776 6 1342 553 172 0 0 chrX 99298301 99298394 -67351902 - B1_Mur4 SINE Alu -21 129 37 6 1342 381 314 34 24 chrX 99298418 99298595 -67351701 - MTE-int LTR MaLR -1322 258 49 6 1342 376 330 22 11 chrX 99298629 99298813 -67351483 + MuRRS4-int LTR ERV1 1167 1352 -3711 6 1342 212 236 0 143 chrX 99299046 99299130 -67351166 - ID2 SINE ID -9 74 3 6 1342 281 281 41 10 chrX 99299385 99299482 -67350814 - B4 SINE B4 -191 101 2 6 1342 3288 24 39 0 chrX 99300308 99300689 -67349607 - MTA_Mm LTR MaLR 0 396 1 6 1342 335 313 89 38 chrX 99301183 99301426 -67348870 + L1MD LINE L1 3072 3331 -2812 6 1342 326 265 175 38 chrX 99301406 99301669 -67348627 + L1MC4 LINE L1 716 1014 -5201 6 1342 2371 156 64 54 chrX 99303490 99303992 -67346304 - RMER15 LTR ERVL -57 518 12 6 1342 228 274 93 19 chrX 99304158 99304181 -67346115 - B3A SINE B2 -82 116 1 6 1342 289 259 47 0 chrX 99304181 99304266 -67346030 - B4A SINE B4 -203 89 1 6 1342 288 211 0 17 chrX 99305149 99305207 -67345089 - MTE2a-int LTR MaLR -1313 57 1 6 1342 788 201 69 84 chrX 99305207 99305468 -67344828 - MTE2a LTR MaLR 0 379 123 6 1342 546 124 0 0 chrX 99305511 99305600 -67344696 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 6 1342 225 231 0 0 chrX 99305614 99305653 -67344643 + RSINE1 SINE B4 1 39 -126 6 1342 995 175 10 26 chrX 99305656 99305850 -67344446 + B3 SINE B2 19 209 -7 6 1342 338 223 0 50 chrX 99305881 99305980 -67344316 + ID_B1 SINE B4 130 223 -1 6 1342 353 193 60 0 chrX 99305983 99306066 -67344230 + L1M LINE L1 5318 5405 -954 6 1342 820 131 7 21 chrX 99306279 99306419 -67343877 + B1_Mur1 SINE Alu 12 149 0 6 1342 854 258 36 101 chrX 99306419 99306440 -67343856 + L1MD LINE L1 2275 2290 -3856 6 1342 1388 248 95 93 chrX 99306440 99306541 -67343755 + MT2A LTR ERVL 5 102 -431 6 1342 1057 171 58 34 chrX 99306541 99306747 -67343549 - B3 SINE B2 -3 213 3 6 1342 1388 248 95 93 chrX 99306747 99307170 -67343126 + MT2A LTR ERVL 103 530 -3 6 1342 854 258 36 101 chrX 99307170 99307566 -67342730 + L1MD LINE L1 2291 2665 -3481 6 1342 434 282 80 25 chrX 99307567 99307767 -67342529 + B4A SINE B4 2 212 -80 6 1342 841 156 57 51 chrX 99307767 99307943 -67342353 + B2_Mm2 SINE B2 5 181 -14 6 1342 719 109 0 32 chrX 99307943 99308066 -67342230 + B1_Mur4 SINE Alu 32 150 0 6 1342 225 0 0 0 chrX 99308071 99308096 -67342200 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 6 1342 372 300 9 9 chrX 99308140 99308251 -67342045 + PB1D10 SINE Alu 2 112 -5 6 1342 590 310 13 0 chrX 99308710 99308868 -67341428 + RSINE1 SINE B4 4 163 -2 6 1342 281 152 30 0 chrX 99308876 99308942 -67341354 + GA-rich Low_complexity Low_complexity 1 68 0 6 1342 772 221 7 0 chrX 99308978 99309123 -67341173 - B1_Mur1 SINE Alu -1 148 3 6 1342 25 0 0 0 chrX 99309125 99309150 -67341146 + AT_rich Low_complexity Low_complexity 1 25 0 6 1342 403 180 124 0 chrX 99309246 99309335 -67340961 + PB1 SINE Alu 21 120 -7 6 1342 837 256 61 61 chrX 99309337 99309616 -67340680 + B4A SINE B4 1 279 -13 6 1342 927 41 0 0 chrX 99309887 99310008 -67340288 - B1_Mus2 SINE Alu 0 147 27 6 1342 262 249 122 4 chrX 99310299 99310404 -67339892 + ID4_ SINE ID 8 120 -32 6 1342 732 190 41 34 chrX 99310585 99310721 -67339575 + B1_Mur4 SINE Alu 2 139 -11 6 1342 210 37 0 0 chrX 99310721 99310748 -67339548 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 6 1342 440 269 50 8 chrX 99311404 99311524 -67338772 - ID_B1 SINE B4 -7 217 93 6 1342 793 139 14 7 chrX 99311715 99311853 -67338443 - B1_Mus2 SINE Alu 0 147 9 6 1342 385 202 39 85 chrX 99311741 99311871 -67338425 - MT2B LTR ERVL -323 278 155 6 1342 926 220 0 46 chrX 99311868 99312087 -67338209 - ID_B1 SINE B4 0 224 16 6 1342 408 240 35 41 chrX 99312304 99312452 -67337844 - B4 SINE B4 -7 285 92 6 1342 252 224 0 33 chrX 99312511 99312571 -67337725 - B4 SINE B4 -232 60 3 6 1342 355 242 132 0 chrX 99312597 99312688 -67337608 - PB1D10 SINE Alu -14 103 1 6 1342 405 264 38 0 chrX 99313108 99313214 -67337082 + PB1D9 SINE Alu 10 119 -1 6 1342 315 263 13 0 chrX 99313238 99313314 -67336982 + ID4 SINE ID 5 81 -2 6 1342 396 208 51 20 chrX 99313447 99313545 -67336751 + PB1D10 SINE Alu 12 112 -5 6 1342 277 267 146 24 chrX 99313644 99313809 -67336487 - MIR SINE MIR -75 187 3 6 1342 228 242 26 154 chrX 99313809 99313926 -67336370 + MT2B LTR ERVL 149 250 -351 6 1342 570 189 0 18 chrX 99313833 99313946 -67336350 + PB1D9 SINE Alu 9 119 -1 6 1342 257 151 19 0 chrX 99313948 99314001 -67336295 + GA-rich Low_complexity Low_complexity 3 56 0 6 1342 186 43 0 0 chrX 99315294 99315317 -67334979 + (TCCCC)n Simple_repeat Simple_repeat 5 27 0 6 1342 1190 48 0 20 chrX 99315745 99315895 -67334401 + B1_Mus1 SINE Alu 1 147 -1 6 1342 259 65 21 21 chrX 99315900 99315947 -67334349 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1342 197 345 35 26 chrX 99316280 99316396 -67333900 + L2c LINE L2 3267 3383 -4 6 1342 189 0 0 0 chrX 99316560 99316581 -67333715 + (CA)n Simple_repeat Simple_repeat 1 21 0 6 1342 446 220 79 44 chrX 99317342 99317456 -67332840 + B4 SINE B4 173 290 -2 6 1342 2481 75 16 3 chrX 99317490 99317813 -67332483 - ORR1A2 LTR MaLR 0 327 1 6 1342 385 228 0 0 chrX 99318397 99318476 -67331820 - L1MD1 LINE L1 -84 6158 6080 6 1342 1355 87 32 0 chrX 99318532 99318717 -67331579 - B2_Mm2 SINE B2 -3 192 2 6 1342 1190 41 7 0 chrX 99318801 99318946 -67331350 - B1_Mus1 SINE Alu -1 147 2 6 1342 559 233 17 0 chrX 99318950 99319070 -67331226 - ID_B1 SINE B4 -1 223 102 6 1342 886 194 7 0 chrX 99319145 99319289 -67331007 - B1_Mur2 SINE Alu -2 147 3 6 1342 536 222 86 47 chrX 99319299 99319511 -67330785 - L1MD1 LINE L1 -303 5939 5721 6 1342 205 309 62 68 chrX 99319959 99320136 -67330160 + MER5B DNA MER1_type 1 176 -2 6 1342 215 140 0 74 chrX 99320149 99320203 -67330093 + MIRb SINE MIR 172 221 -47 6 1342 1172 75 0 0 chrX 99320355 99320502 -67329794 + B1_Mm SINE Alu 1 147 0 6 1342 2539 83 3 3 chrX 99320658 99320985 -67329311 + ORR1A2 LTR MaLR 1 327 0 6 1342 464 255 45 8 chrX 99321093 99321230 -67329066 - B1F SINE Alu 0 150 3 7 1342 1140 86 23 0 chrX 99321386 99321560 -67328736 - B2_Mm2 SINE B2 -5 190 13 7 1342 492 299 15 45 chrX 99321559 99321692 -67328604 + RSINE1 SINE B4 37 165 0 7 1342 541 269 57 0 chrX 99321732 99321873 -67328423 + B3A SINE B2 2 150 -48 7 1342 435 114 29 0 chrX 99321877 99321947 -67328349 - RSINE1 SINE B4 -39 126 55 7 1342 793 202 80 48 chrX 99323425 99323612 -67326684 - B3A SINE B2 -4 194 2 7 1342 555 236 25 94 chrX 99323671 99323771 -67326525 + RSINE1 SINE B4 18 118 -47 7 1342 1509 222 63 84 chrX 99323771 99324095 -67326201 - MTD LTR MaLR 0 419 116 7 1342 506 16 16 0 chrX 99324095 99324158 -67326138 + (CATA)n Simple_repeat Simple_repeat 2 65 0 7 1342 1509 222 63 84 chrX 99324158 99324261 -67326035 - MTD LTR MaLR -304 115 2 7 1342 555 236 25 94 chrX 99324261 99324319 -67325977 + RSINE1 SINE B4 119 165 0 7 1342 1157 51 0 0 chrX 99324358 99324496 -67325800 + B1_Mus1 SINE Alu 1 138 -10 7 1342 1474 197 48 48 chrX 99324575 99324867 -67325429 + MTD LTR MaLR 82 374 -45 7 1342 1461 69 37 0 chrX 99324867 99325055 -67325241 - B2_Mm2 SINE B2 0 195 1 7 1342 1474 197 48 48 chrX 99325055 99325093 -67325203 + MTD LTR MaLR 375 412 -7 7 1342 23 54 0 0 chrX 99325128 99325165 -67325131 + AT_rich Low_complexity Low_complexity 1 37 0 7 1342 704 287 85 52 chrX 99325189 99325461 -67324835 - B4 SINE B4 -10 282 2 7 1342 435 289 59 0 chrX 99325510 99325645 -67324651 - RSINE1 SINE B4 -11 154 12 7 1342 224 273 28 70 chrX 99325803 99325874 -67324422 - RSINE1 SINE B4 -9 156 89 7 1342 1028 159 194 0 chrX 99325989 99326301 -67323995 - ORR1C1 LTR MaLR 0 378 6 7 1342 1406 54 54 0 chrX 99326450 99326634 -67323662 + B2_Mm2 SINE B2 2 195 0 7 1342 223 299 13 25 chrX 99326760 99326839 -67323457 + B1F SINE Alu 71 148 -1 7 1342 459 132 0 14 chrX 99326918 99326987 -67323309 + ID4_ SINE ID 3 70 -13 7 1342 719 196 14 27 chrX 99327353 99327500 -67322796 + B1_Mur2 SINE Alu 5 149 0 7 1342 800 110 72 22 chrX 99327553 99327692 -67322604 - B1_Mus1 SINE Alu 0 148 3 7 1342 360 242 99 15 chrX 99327736 99327870 -67322426 + L1M5 LINE L1 5541 5675 -481 7 1342 227 281 16 0 chrX 99327972 99328036 -67322260 + ID4 SINE ID 2 66 -17 7 1342 738 92 244 0 chrX 99328114 99328233 -67322063 + B1_Mus1 SINE Alu 1 148 0 7 1342 4253 45 0 4 chrX 99328233 99328730 -67321566 - L1_Mm LINE L1 -85 5798 5304 7 1342 2792 49 0 6 chrX 99328730 99329076 -67321220 + L1Md_F2 LINE L1 6223 6566 -16 7 1342 454 220 100 17 chrX 99329137 99329257 -67321039 - B1_Mur1 SINE Alu -2 147 18 7 1342 382 61 30 0 chrX 99329354 99329420 -67320876 + (TTTTTG)n Simple_repeat Simple_repeat 3 70 0 7 1342 637 213 24 184 chrX 99329476 99329683 -67320613 - B3A SINE B2 0 198 22 7 1342 1082 195 14 23 chrX 99329733 99329948 -67320348 + B3 SINE B2 1 213 -3 7 1342 685 187 14 21 chrX 99330205 99330347 -67319949 + B1_Mus1 SINE Alu 7 147 -1 7 1342 312 91 0 0 chrX 99330869 99330913 -67319383 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 7 1342 5094 93 43 14 chrX 99330913 99331652 -67318644 - Lx4A LINE L1 -16 7042 6282 7 1342 1243 110 10 5 chrX 99331652 99331844 -67318452 + Lx4A LINE L1 5920 6112 -946 7 1342 9962 89 27 33 chrX 99331879 99332475 -67317821 + Lx3_Mus LINE L1 5252 5839 -47 7 1342 203 61 30 0 chrX 99332475 99332508 -67317788 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 7 1342 1266 97 26 21 chrX 99332513 99332703 -67317593 + B2_Mm1t SINE B2 1 191 -2 7 1342 10015 66 45 25 chrX 99332703 99333818 -67316478 + Lx3_Mus LINE L1 5837 7001 -8 7 1342 216 184 0 0 chrX 99334498 99334547 -67315749 + GA-rich Low_complexity Low_complexity 3 51 0 7 1342 25 0 0 0 chrX 99335064 99335089 -67315207 + AT_rich Low_complexity Low_complexity 1 25 0 7 1342 1169 51 0 0 chrX 99335098 99335236 -67315060 + B1_Mus1 SINE Alu 2 139 -9 7 1342 245 367 18 0 chrX 99335679 99335788 -67314508 - L2a LINE L2 -5 3421 3311 7 1342 713 260 151 39 chrX 99335895 99336127 -67314169 + MER21B LTR ERV1 23 280 -583 7 1342 912 135 58 63 chrX 99336195 99336369 -67313927 + URR1B DNA MER1_type 53 225 0 7 1342 193 345 71 12 chrX 99336453 99336538 -67313758 - L3 LINE CR1 -4257 232 143 7 1342 402 282 134 0 chrX 99336814 99336956 -67313340 + RMER15 LTR ERVL 347 507 -68 7 1342 3255 16 82 0 chrX 99337002 99337382 -67312914 - IAPLTR2a LTR ERVK 0 411 1 7 1342 260 235 144 19 chrX 99337420 99337524 -67312772 + MER21B LTR ERV1 638 754 -109 7 1342 236 331 144 11 chrX 99337616 99337792 -67312504 + MIRb SINE MIR 58 249 -19 7 1342 511 224 27 36 chrX 99337902 99338013 -67312283 + PB1D9 SINE Alu 5 114 -6 7 1342 25 31 0 0 chrX 99342173 99342205 -67308091 + AT_rich Low_complexity Low_complexity 1 32 0 7 1342 243 309 14 29 chrX 99342212 99342282 -67308014 + ID4_ SINE ID 1 69 -14 7 1342 798 211 60 37 chrX 99342356 99342573 -67307723 - ID_B1 SINE B4 -1 223 2 7 1342 510 235 139 21 chrX 99342670 99342857 -67307439 + L1M2 LINE L1 5533 5741 -550 7 1342 960 153 197 11 chrX 99342900 99343078 -67307218 + B3 SINE B2 2 212 -4 7 1342 508 293 100 72 chrX 99343111 99343571 -67306725 + RLTR12B LTR ERVK 42 514 -14 7 1342 24 0 0 0 chrX 99343575 99343599 -67306697 + AT_rich Low_complexity Low_complexity 1 24 0 7 1342 277 250 10 111 chrX 99343853 99343869 -67306427 + MT2B LTR ERVL 151 156 -445 7 1342 480 231 0 21 chrX 99343869 99343962 -67306334 + B1_Mm SINE Alu 2 92 -55 7 1342 22 0 0 0 chrX 99344044 99344066 -67306230 + AT_rich Low_complexity Low_complexity 1 22 0 7 1342 285 158 65 3 chrX 99344069 99344153 -67306143 + L1M5 LINE L1 5377 5465 -894 7 1342 702 144 350 0 chrX 99344161 99344321 -67305975 + B3 SINE B2 1 216 0 7 1342 307 269 41 142 chrX 99344345 99344514 -67305782 + L1MB7 LINE L1 6033 6184 0 7 1342 548 211 94 36 chrX 99344638 99344776 -67305520 - B1_Mus2 SINE Alu 0 147 2 7 1342 376 196 183 11 chrX 99344928 99345021 -67305275 + PB1D10 SINE Alu 1 109 -8 7 1342 418 247 0 0 chrX 99345041 99345122 -67305174 + ID4_ SINE ID 3 83 0 7 1342 339 306 82 59 chrX 99345129 99345299 -67304997 - MER5A DNA MER1_type 0 189 16 7 1342 364 271 247 0 chrX 99345356 99345441 -67304855 + B1_Mur1 SINE Alu 2 107 -42 7 1342 708 173 12 25 chrX 99345443 99345603 -67304693 + RMER3D-int LTR ERVK 2684 2841 -1 7 1342 1049 128 84 16 chrX 99345605 99345809 -67304487 + RLTR17 LTR ERVK 2 211 -210 7 1342 844 125 14 7 chrX 99345809 99345954 -67304342 + L1_Mur3 LINE L1 5173 5318 -562 7 1342 1051 241 16 21 chrX 99345959 99346201 -67304095 - L1_Mur3 LINE L1 -225 5655 5415 7 1342 1044 196 18 18 chrX 99346201 99346424 -67303872 - MTC LTR MaLR -198 223 1 7 1342 1235 54 0 0 chrX 99346456 99346603 -67303693 + B1_Mm SINE Alu 1 147 0 7 1342 319 221 0 56 chrX 99346682 99346754 -67303542 + B1_Mur4 SINE Alu 83 150 0 7 1342 824 304 66 37 chrX 99346854 99346884 -67303412 + B4 SINE B4 12 38 -254 7 1342 2483 83 3 35 chrX 99346884 99347170 -67303126 + ORR1A2 LTR MaLR 1 287 -40 7 1342 1557 52 0 10 chrX 99347170 99347363 -67302933 + B2_Mm1a SINE B2 2 192 -1 7 1342 2483 83 3 35 chrX 99347363 99347414 -67302882 + ORR1A2 LTR MaLR 288 327 0 7 1342 824 304 66 37 chrX 99347414 99347656 -67302640 + B4 SINE B4 39 292 0 7 1342 1366 95 11 0 chrX 99347849 99348038 -67302258 - B2_Mm1t SINE B2 -1 192 2 7 1342 780 184 29 0 chrX 99348040 99348176 -67302120 - B1_Mur1 SINE Alu 0 149 10 7 1342 864 146 34 34 chrX 99348201 99348350 -67301946 - B1_Mur4 SINE Alu 0 150 2 7 1342 763 183 0 53 chrX 99348383 99348533 -67301763 + B1_Mur4 SINE Alu 1 142 -8 7 1342 691 178 276 6 chrX 99348611 99348781 -67301515 + B3 SINE B2 1 216 0 7 1342 569 278 19 31 chrX 99348944 99349104 -67301192 + RSINE1 SINE B4 4 161 -4 7 1342 301 331 108 70 chrX 99349269 99349555 -67300741 + ORR1E LTR MaLR 63 359 0 7 1342 742 127 0 30 chrX 99349680 99349828 -67300468 + B1_Mur4 SINE Alu 10 150 0 7 1342 287 302 76 33 chrX 99349977 99350151 -67300145 + B3 SINE B2 2 190 -5 7 1342 1265 74 74 0 chrX 99350155 99350330 -67299966 + B2_Mm1t SINE B2 1 188 -5 7 1342 1197 42 0 7 chrX 99350339 99350477 -67299819 + B1_Mus2 SINE Alu 1 138 -9 7 1342 186 43 0 0 chrX 99350477 99350500 -67299796 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 7 1342 250 296 153 0 chrX 99351002 99351100 -67299196 + B1F1 SINE Alu 5 117 0 7 1342 497 235 0 32 chrX 99351115 99351238 -67299058 + PB1D9 SINE Alu 2 120 0 7 1342 649 186 0 34 chrX 99351269 99351386 -67298910 + B3 SINE B2 5 117 -99 7 1342 425 219 40 16 chrX 99351398 99351523 -67298773 - L1M3 LINE L1 -740 5443 5316 7 1342 880 175 3 19 chrX 99351558 99351748 -67298548 - B3 SINE B2 -13 185 2 7 1343 472 228 0 34 chrX 99352902 99353020 -67297276 + PB1D10 SINE Alu 1 114 -3 7 1343 22 35 0 0 chrX 99353159 99353188 -67297108 + AT_rich Low_complexity Low_complexity 1 29 0 7 1343 1534 221 52 39 chrX 99353210 99353591 -67296705 + RMER10B LTR ERVL 1 386 -12 7 1343 288 303 43 33 chrX 99353598 99353690 -67296606 + PB1 SINE Alu 21 113 -14 7 1343 237 211 6 0 chrX 99353694 99353751 -67296545 + ID2 SINE ID 4 61 -22 7 1343 291 224 50 50 chrX 99353930 99354010 -67296286 + B1F1 SINE Alu 18 97 -52 7 1343 715 201 77 31 chrX 99354032 99354108 -67296188 + RLTR33 LTR ERVK 129 204 -474 7 1343 1210 54 7 0 chrX 99354108 99354255 -67296041 + B1_Mus1 SINE Alu 1 148 0 7 1343 1751 124 179 9 chrX 99354255 99354619 -67295677 + RLTR33 LTR ERVK 205 678 0 7 1343 313 287 139 0 chrX 99354620 99354728 -67295568 + L1MC5 LINE L1 7727 7849 -112 8 1343 876 45 9 0 chrX 99354819 99354929 -67295367 + B1_Mus1 SINE Alu 1 111 -37 8 1343 596 167 44 36 chrX 99355101 99355238 -67295058 - B1_Mur3 SINE Alu 0 149 12 8 1343 1243 187 0 14 chrX 99355533 99355745 -67294551 + MT2A LTR ERVL 1 209 -324 8 1343 719 164 91 162 chrX 99355741 99355899 -67294397 - B2_Mm2 SINE B2 -9 186 34 8 1343 818 57 197 0 chrX 99355899 99356021 -67294275 - B1_Mus1 SINE Alu -1 147 2 8 1343 719 164 91 162 chrX 99356021 99356059 -67294237 - B2_Mm2 SINE B2 -162 33 4 8 1343 1114 166 272 34 chrX 99356065 99356290 -67294006 + MT2A LTR ERVL 202 459 -74 8 1343 189 0 0 0 chrX 99356290 99356311 -67293985 + (TG)n Simple_repeat Simple_repeat 2 22 0 8 1343 1114 166 272 34 chrX 99356311 99356353 -67293943 + MT2A LTR ERVL 460 531 -2 8 1343 270 0 0 0 chrX 99356443 99356473 -67293823 + (T)n Simple_repeat Simple_repeat 1 30 0 8 1343 1286 34 0 0 chrX 99356473 99356620 -67293676 - B1_Mm SINE Alu 0 147 1 8 1343 1771 41 0 18 chrX 99356705 99356927 -67293369 - L1Md_F2 LINE L1 -6 6576 6359 8 1343 194 361 108 27 chrX 99356935 99357120 -67293176 + L2 LINE L2 2348 2547 -872 8 1343 314 240 58 1 chrX 99357242 99357317 -67292979 - B1F2 SINE Alu -30 90 12 8 1343 272 319 14 27 chrX 99357256 99357330 -67292966 - ID_B1 SINE B4 -70 154 82 8 1343 240 283 0 32 chrX 99357356 99357418 -67292878 - tRNA-Ala-GCY_ tRNA tRNA -8 67 8 8 1343 211 281 141 0 chrX 99357471 99357535 -67292761 - ID4 SINE ID -4 79 7 8 1343 259 81 0 26 chrX 99358022 99358060 -67292236 - B2_Mm2 SINE B2 -112 83 47 8 1343 1395 68 23 0 chrX 99358091 99358268 -67292028 - B2_Mm2 SINE B2 -13 182 2 8 1343 1159 82 0 0 chrX 99358275 99358422 -67291874 - B1_Mus1 SINE Alu -1 147 1 8 1343 213 121 0 0 chrX 99359562 99359595 -67290701 + (TTTTC)n Simple_repeat Simple_repeat 5 37 0 8 1343 1214 68 0 0 chrX 99359598 99359746 -67290550 - B1_Mus1 SINE Alu 0 148 1 8 1343 648 271 93 11 chrX 99359752 99359935 -67290361 - B3A SINE B2 0 198 1 8 1343 829 152 34 78 chrX 99359954 99360111 -67290185 - B2_Mm2 SINE B2 -4 191 37 8 1343 1361 61 67 0 chrX 99360111 99360291 -67290005 - B2_Mm1a SINE B2 0 193 2 8 1343 829 152 34 78 chrX 99360291 99360312 -67289984 - B2_Mm2 SINE B2 -159 36 21 8 1343 679 139 205 0 chrX 99360322 99360444 -67289852 + B1_Mur1 SINE Alu 2 148 -1 8 1343 240 35 0 0 chrX 99360486 99360515 -67289781 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 8 1343 459 337 35 5 chrX 99360532 99360735 -67289561 + L1ME3 LINE L1 5788 5996 -166 8 1343 920 196 296 97 chrX 99360798 99361083 -67289213 - MTC LTR MaLR 0 421 47 8 1343 941 55 94 0 chrX 99361083 99361211 -67289085 + B1_Mur4 SINE Alu 1 140 -10 8 1343 920 196 296 97 chrX 99361211 99361276 -67289020 - MTC LTR MaLR -375 46 1 8 1343 225 137 0 89 chrX 99361277 99361333 -67288963 + L1ME2 LINE L1 6113 6163 -1 8 1343 403 280 115 34 chrX 99361408 99361483 -67288813 + B2_Mm2 SINE B2 2 91 -104 8 1343 279 0 0 0 chrX 99361483 99361514 -67288782 + (TA)n Simple_repeat Simple_repeat 1 31 0 8 1343 403 280 115 34 chrX 99361514 99361586 -67288710 + B2_Mm2 SINE B2 92 161 -34 8 1343 499 231 11 0 chrX 99361624 99361715 -67288581 + PB1D10 SINE Alu 1 92 -25 8 1343 291 257 41 99 chrX 99361715 99361742 -67288554 + MT2B2 LTR ERVL 163 273 -311 8 1343 381 303 9 0 chrX 99361977 99362086 -67288210 + MamRep434 DNA TcMar 300 409 -17 8 1343 347 250 31 94 chrX 99363097 99363123 -67287173 - PB1D7 SINE Alu 0 120 96 8 1343 626 148 6 167 chrX 99363123 99363285 -67287011 + B1_Mus1 SINE Alu 1 136 -12 8 1343 189 0 0 0 chrX 99363286 99363307 -67286989 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 8 1343 347 250 31 94 chrX 99363307 99363406 -67286890 - PB1D7 SINE Alu -25 95 1 8 1343 542 264 56 14 chrX 99363406 99363548 -67286748 - L2a LINE L2 -10 3416 3269 8 1343 815 191 79 0 chrX 99363657 99363809 -67286487 - B3 SINE B2 -6 210 47 8 1343 441 194 40 20 chrX 99363996 99364096 -67286200 + B1_Mur1 SINE Alu 36 137 -12 8 1343 207 162 0 0 chrX 99364098 99364135 -67286161 + CT-rich Low_complexity Low_complexity 2 38 0 8 1343 917 145 0 14 chrX 99364177 99364317 -67285979 + B1_Mur4 SINE Alu 2 139 -11 8 1343 675 152 63 8 chrX 99364333 99364459 -67285837 + RMER1C Other Other 933 1065 -277 8 1343 289 153 0 106 chrX 99364468 99364534 -67285762 - B2_Mm2 SINE B2 -136 59 1 8 1343 402 323 54 0 chrX 99364687 99364817 -67285479 + ID_B1 SINE B4 79 215 -9 8 1343 259 184 0 0 chrX 99364827 99364876 -67285420 - MLT2B4 LTR ERVL -507 49 1 8 1343 182 384 10 20 chrX 99364910 99365011 -67285285 - L2a LINE L2 -225 3201 3102 8 1343 709 231 0 26 chrX 99365011 99365162 -67285134 + B1_Mus2 SINE Alu 1 147 0 8 1343 565 295 181 62 chrX 99365174 99365469 -67284827 - L2a LINE L2 -299 3127 2811 8 1343 733 137 17 8 chrX 99365469 99365587 -67284709 - PB1D9 SINE Alu -1 119 1 8 1343 565 298 132 115 chrX 99365587 99365663 -67284633 - L2a LINE L2 -609 2810 2749 8 1343 849 256 9 41 chrX 99365663 99365883 -67284413 + ID_B1 SINE B4 5 217 -7 8 1343 565 298 132 115 chrX 99365883 99366050 -67284246 - L2a LINE L2 -671 2748 2573 8 1343 244 252 240 47 chrX 99366060 99366189 -67284107 + MIRc SINE MIR 1 154 -114 8 1343 1600 238 31 31 chrX 99366254 99366636 -67283660 + RMER5 LTR ERV1 5 386 -148 8 1343 564 174 27 27 chrX 99366614 99366726 -67283570 - B1_Mus2 SINE Alu -1 146 35 8 1343 246 253 82 24 chrX 99366659 99366744 -67283552 - MT2B LTR ERVL -344 257 168 8 1343 684 150 222 23 chrX 99366748 99366919 -67283377 + RMER5 LTR ERV1 328 532 -2 8 1343 324 250 125 0 chrX 99366933 99367029 -67283267 - PB1D7 SINE Alu 0 120 13 8 1343 180 270 61 45 chrX 99367039 99367105 -67283191 + MIRb SINE MIR 179 245 -23 8 1343 769 119 0 8 chrX 99367563 99367682 -67282614 - B1_Mm SINE Alu -8 139 22 8 1343 741 174 34 34 chrX 99367766 99367915 -67282381 + B1_Mur1 SINE Alu 1 149 0 8 1343 477 283 71 0 chrX 99368371 99368484 -67281812 - PB1 SINE Alu 0 127 7 8 1343 871 257 29 0 chrX 99368751 99368957 -67281339 - ID_B1 SINE B4 -12 212 1 8 1343 189 74 0 0 chrX 99369545 99369572 -67280724 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 8 1343 568 276 7 7 chrX 99369713 99369848 -67280448 - ID_B1 SINE B4 -8 216 82 8 1343 189 94 0 0 chrX 99370038 99370070 -67280226 + (A)n Simple_repeat Simple_repeat 1 32 0 8 1343 420 272 17 34 chrX 99370151 99370269 -67280027 + PB1D10 SINE Alu 1 116 -1 8 1343 561 203 113 38 chrX 99370281 99370414 -67279882 + B1_Mur1 SINE Alu 6 148 -1 8 1343 845 79 157 7 chrX 99370468 99370608 -67279688 + B2_Mm1t SINE B2 18 178 -15 8 1343 479 71 288 104 chrX 99370656 99370781 -67279515 + B2_Mm2 SINE B2 47 194 -1 8 1343 483 276 40 22 chrX 99370965 99371133 -67279163 + B3 SINE B2 42 211 -5 8 1343 449 270 17 0 chrX 99371517 99371632 -67278664 + PB1D9 SINE Alu 4 120 0 8 1343 26 64 0 0 chrX 99371683 99371730 -67278566 + AT_rich Low_complexity Low_complexity 1 47 0 8 1343 960 47 148 0 chrX 99371889 99372017 -67278279 + B1_Mm SINE Alu 1 147 0 8 1343 285 98 0 0 chrX 99372019 99372060 -67278236 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 8 1343 507 246 279 58 chrX 99372060 99372283 -67278013 + MER63D DNA AcHobo 125 412 -649 8 1343 1372 164 0 0 chrX 99372283 99372509 -67277787 + URR1A DNA MER1_type 1 226 0 8 1343 507 246 279 58 chrX 99372509 99372561 -67277735 + MER63D DNA AcHobo 413 461 -600 8 1343 227 356 0 0 chrX 99372570 99372629 -67277667 + B4A SINE B4 87 145 -147 8 1343 426 274 0 0 chrX 99372581 99372665 -67277631 + PB1D10 SINE Alu 13 96 -21 8 1343 282 253 67 0 chrX 99372700 99372775 -67277521 + ID_B1 SINE B4 109 188 -36 8 1343 240 247 58 23 chrX 99372775 99372787 -67277509 + PB1D10 SINE Alu 28 117 0 8 1343 309 210 123 8 chrX 99372947 99372968 -67277328 + B4 SINE B4 70 149 -143 8 1343 344 138 103 0 chrX 99372968 99373026 -67277270 + B1_Mur3 SINE Alu 1 64 -85 8 1343 219 157 0 0 chrX 99373081 99373132 -67277164 + T-rich Low_complexity Low_complexity 1 51 0 8 1343 1253 34 0 7 chrX 99373133 99373281 -67277015 - B1_Mus2 SINE Alu 0 147 1 8 1343 23 0 0 0 chrX 99373963 99373986 -67276310 + GC_rich Low_complexity Low_complexity 1 23 0 8 1343 1336 97 32 0 chrX 99374134 99374320 -67275976 - B2_Mm1a SINE B2 0 193 2 8 1343 291 217 188 0 chrX 99374320 99374389 -67275907 + B1_Mur4 SINE Alu 49 130 -20 8 1343 977 230 224 0 chrX 99374407 99374684 -67275612 + MTE2a LTR MaLR 41 379 0 8 1343 927 287 53 4 chrX 99374684 99374950 -67275346 + MTE2a-int LTR MaLR 2 280 -1300 8 1343 390 301 117 7 chrX 99374953 99375090 -67275206 - RSINE1 SINE B4 -10 155 4 8 1343 21 0 0 0 chrX 99375156 99375177 -67275119 + AT_rich Low_complexity Low_complexity 1 21 0 8 1343 4683 129 40 6 chrX 99375177 99375323 -67274973 - RMER1A Other Other 0 1030 870 8 1343 216 0 0 0 chrX 99375323 99375347 -67274949 + (CAA)n Simple_repeat Simple_repeat 1 24 0 8 1343 4683 161 39 22 chrX 99375347 99376280 -67274016 - RMER1A Other Other -136 930 1 8 1343 271 349 38 0 chrX 99376566 99376672 -67273624 + MTE2a-int LTR MaLR 1469 1578 -2 8 1343 1097 253 92 60 chrX 99376672 99377007 -67273289 + MTE2a LTR MaLR 26 371 -8 8 1343 844 250 62 0 chrX 99377144 99377336 -67272960 + ID_B1 SINE B4 2 205 -19 8 1343 421 156 128 43 chrX 99377622 99377716 -67272580 - B1F2 SINE Alu -17 132 31 8 1343 229 236 51 68 chrX 99377666 99377725 -67272571 - 4.5SRNA scRNA scRNA -12 82 25 8 1343 1096 44 66 0 chrX 99377775 99377912 -67272384 - B1_Mus2 SINE Alu 0 147 2 8 1343 288 204 0 39 chrX 99377932 99377983 -67272313 - ID4_ SINE ID 0 83 35 8 1343 448 303 0 0 chrX 99377985 99378094 -67272202 + Tigger5 DNA MER2_type 127 235 -2171 8 1343 627 245 65 11 chrX 99378130 99378299 -67271997 - ID_B1 SINE B4 -73 219 42 8 1343 226 256 0 0 chrX 99378621 99378664 -67271632 + PB1 SINE Alu 1 43 -84 8 1343 541 233 57 62 chrX 99378840 99379032 -67271264 - RMER5 LTR ERV1 0 534 344 8 1343 235 189 0 0 chrX 99379078 99379115 -67271181 + PB1D7 SINE Alu 19 55 -65 8 1343 310 221 128 70 chrX 99379165 99379321 -67270975 - RMER15 LTR ERVL 0 575 411 9 1343 227 296 27 27 chrX 99381060 99381133 -67269163 + ID SINE ID 15 87 -137 9 1343 184 80 0 0 chrX 99382952 99382977 -67267319 - MER5A DNA MER1_type -77 112 88 9 1343 182 333 60 10 chrX 99384877 99384977 -67265319 - L2c LINE L2 -39 3348 3244 9 1343 180 0 0 0 chrX 99385542 99385562 -67264734 + (TA)n Simple_repeat Simple_repeat 2 21 0 9 1343 577 139 0 0 chrX 99385592 99385678 -67264618 - B1_Mus2 SINE Alu -9 138 53 9 1343 347 289 122 0 chrX 99385675 99385765 -67264531 - PB1D10 SINE Alu -8 109 9 9 1343 311 212 21 96 chrX 99385797 99385891 -67264405 - PB1D10 SINE Alu -1 116 30 9 1343 950 169 19 24 chrX 99385891 99386097 -67264199 - RMER10B LTR ERVL 0 398 194 9 1343 205 294 0 0 chrX 99386106 99386157 -67264139 + G-rich Low_complexity Low_complexity 1 51 0 9 1343 1247 174 15 19 chrX 99386157 99386427 -67263869 - RMER10B LTR ERVL -119 279 11 9 1343 230 296 21 54 chrX 99386364 99386457 -67263839 - B1_Mus2 SINE Alu -56 91 2 9 1343 1385 80 21 11 chrX 99386481 99386671 -67263625 - B2_Mm2 SINE B2 -3 192 1 9 1343 249 33 0 0 chrX 99386671 99386701 -67263595 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 9 1343 1215 29 0 0 chrX 99386701 99386839 -67263457 - B1_Mus1 SINE Alu -9 139 2 9 1343 797 254 14 5 chrX 99386844 99387062 -67263234 - L1MA5 LINE L1 0 6300 6081 9 1343 990 197 33 14 chrX 99387162 99387373 -67262923 - B3 SINE B2 -1 215 1 9 1343 412 241 16 74 chrX 99387577 99387698 -67262598 - PB1D9 SINE Alu -2 118 5 9 1343 1220 248 111 14 chrX 99387840 99388150 -67262146 - Lx8 LINE L1 -169 7304 6963 9 1343 567 43 0 0 chrX 99388150 99388220 -67262076 + (TG)n Simple_repeat Simple_repeat 1 70 0 9 1343 180 0 0 0 chrX 99388220 99388239 -67262057 + (CG)n Simple_repeat Simple_repeat 2 21 0 9 1343 1220 248 111 14 chrX 99388239 99388271 -67262025 - Lx8 LINE L1 -511 6962 6929 9 1343 954 118 0 0 chrX 99388317 99388461 -67261835 - B1_Mur4 SINE Alu -1 149 6 9 1343 1446 150 134 37 chrX 99388656 99389037 -67261259 + RMER10A LTR ERVL 23 440 -2 9 1343 665 80 20 0 chrX 99389037 99389137 -67261159 + (TTTTC)n Simple_repeat Simple_repeat 1 102 0 9 1343 1076 42 0 94 chrX 99389369 99389528 -67260768 - B1_Mus1 SINE Alu -2 146 3 9 1343 557 205 0 57 chrX 99389800 99389924 -67260372 + PB1D10 SINE Alu 1 117 0 9 1343 398 272 8 29 chrX 99390035 99390167 -67260129 + ID_B1 SINE B4 71 200 -92 9 1343 381 22 0 0 chrX 99390169 99390215 -67260081 + (TG)n Simple_repeat Simple_repeat 1 46 0 9 1343 486 0 0 0 chrX 99390215 99390268 -67260028 + (GA)n Simple_repeat Simple_repeat 1 54 0 9 1343 307 269 88 65 chrX 99390672 99390887 -67259409 - L1ME4a LINE L1 -224 5900 5681 9 1343 765 125 0 0 chrX 99390887 99391007 -67259289 + (TCC)n Simple_repeat Simple_repeat 3 122 0 9 1343 883 163 14 0 chrX 99391007 99391154 -67259142 - B1_Mur4 SINE Alu 0 150 2 9 1343 479 209 392 0 chrX 99391156 99391309 -67258987 - B3 SINE B2 -2 214 2 9 1343 1246 50 0 58 chrX 99391411 99391600 -67258696 + B2_Mm2 SINE B2 15 192 -3 9 1343 1107 189 14 14 chrX 99391630 99391845 -67258451 - B3 SINE B2 0 216 2 9 1343 342 254 66 98 chrX 99391860 99391982 -67258314 + B3A SINE B2 79 196 -2 9 1343 1237 48 7 0 chrX 99392098 99392245 -67258051 - B1_Mus1 SINE Alu 0 148 1 9 1343 1388 71 28 0 chrX 99392569 99392751 -67257545 + B2_Mm2 SINE B2 2 188 -7 9 1343 496 153 35 0 chrX 99393542 99393627 -67256669 - PB1D9 SINE Alu -8 112 25 9 1343 1009 104 14 0 chrX 99393780 99393924 -67256372 + B1_Mus1 SINE Alu 1 146 -2 9 1343 252 86 0 0 chrX 99393931 99393966 -67256330 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 9 1343 772 242 62 10 chrX 99393971 99394163 -67256133 - B3 SINE B2 -13 203 2 9 1343 790 147 39 0 chrX 99394189 99394318 -67255978 - B1_Mur3 SINE Alu -15 134 1 9 1343 438 278 23 31 chrX 99394339 99394469 -67255827 - B4A SINE B4 -81 211 83 9 1343 260 188 0 0 chrX 99394538 99394586 -67255710 - L1MB4 LINE L1 -47 6133 6086 9 1343 996 88 0 75 chrX 99394589 99394748 -67255548 - B1_Mus2 SINE Alu 0 147 1 9 1343 1231 41 0 0 chrX 99394882 99395029 -67255267 - B1_Mus1 SINE Alu 0 148 2 9 1343 1110 96 0 0 chrX 99395134 99395280 -67255016 - B1_Mus2 SINE Alu 0 147 2 9 1343 1507 213 52 15 chrX 99395341 99395670 -67254626 - Lx8 LINE L1 -326 7147 6807 9 1343 652 35 0 0 chrX 99395681 99395766 -67254530 - BC1_Mm scRNA scRNA -67 85 1 9 1343 401 210 0 12 chrX 99395772 99395854 -67254442 - Lx8 LINE L1 -673 6800 6720 9 1343 777 200 0 7 chrX 99395864 99396005 -67254291 - B1_Mur1 SINE Alu 0 149 10 9 1343 629 285 5 54 chrX 99396006 99396210 -67254086 - Lx8 LINE L1 -756 6717 6524 9 1343 598 167 167 0 chrX 99396268 99396388 -67253908 - B1_Mur4 SINE Alu -8 142 3 9 1343 745 214 7 14 chrX 99396398 99396540 -67253756 - B1_Mur2 SINE Alu -6 143 3 9 1343 586 95 0 21 chrX 99396548 99396645 -67253651 + (TCC)n Simple_repeat Simple_repeat 2 96 0 9 1343 907 51 0 0 chrX 99396647 99396765 -67253531 - B1_Mus1 SINE Alu -1 147 30 9 1343 2412 168 23 117 chrX 99396766 99396980 -67253316 - L1_Mur3 LINE L1 -89 5791 5592 9 1343 207 0 0 0 chrX 99396980 99397003 -67253293 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 1343 1166 54 7 13 chrX 99397006 99397155 -67253141 - B1_Mus1 SINE Alu 0 148 1 9 1343 2412 168 23 117 chrX 99397155 99397482 -67252814 - L1_Mur3 LINE L1 -289 5591 5289 9 1343 1085 83 7 0 chrX 99397482 99397626 -67252670 - B1_Mus1 SINE Alu -2 146 2 9 1343 2412 168 23 117 chrX 99397626 99397651 -67252645 - L1_Mur3 LINE L1 -592 5288 5274 9 1343 1484 52 15 25 chrX 99397658 99397855 -67252441 - B2_Mm2 SINE B2 0 195 1 9 1343 317 85 348 16 chrX 99397858 99397970 -67252326 - B2_Mm2 SINE B2 0 195 47 9 1343 1130 78 0 18 chrX 99398044 99398214 -67252082 - B2_Mm2 SINE B2 -28 167 1 9 1343 7718 218 142 69 chrX 99398216 99398771 -67251525 - L1_Mur3 LINE L1 -605 5275 4638 9 1343 189 0 0 0 chrX 99398771 99398792 -67251504 + (TC)n Simple_repeat Simple_repeat 2 22 0 9 1343 7718 218 142 69 chrX 99398792 99399312 -67250984 - L1_Mur3 LINE L1 -1243 4637 4127 9 1343 1466 68 21 16 chrX 99399312 99399506 -67250790 - B2_Mm2 SINE B2 0 195 1 9 1343 7718 218 142 69 chrX 99399506 99399704 -67250592 - L1_Mur3 LINE L1 -1754 4126 3849 9 1343 1349 59 31 26 chrX 99399704 99399736 -67250560 - B2_Mm1t SINE B2 0 193 161 9 1343 207 0 0 0 chrX 99399736 99399759 -67250537 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 9 1343 1349 59 31 26 chrX 99399759 99399917 -67250379 - B2_Mm1t SINE B2 -33 160 2 9 1343 7718 218 142 69 chrX 99399917 99400172 -67250124 - L1_Mur3 LINE L1 -2032 3848 3508 9 1343 1129 90 7 0 chrX 99400172 99400317 -67249979 - B1_Mus2 SINE Alu 0 147 2 9 1343 7718 218 142 69 chrX 99400317 99400440 -67249856 - L1_Mur3 LINE L1 -2373 3507 3343 9 1343 1333 113 16 0 chrX 99400440 99400625 -67249671 + B2_Mm2 SINE B2 2 189 -6 9 1343 7718 218 142 69 chrX 99400625 99400709 -67249587 - L1_Mur3 LINE L1 -2538 3342 3250 9 1343 1191 54 0 20 chrX 99400709 99400859 -67249437 - B1_Mus2 SINE Alu 0 147 1 9 1343 7718 222 122 60 chrX 99400859 99403274 -67247022 - L1_Mur3 LINE L1 -2631 3249 843 9 1343 257 266 128 0 chrX 99403614 99403708 -67246588 - L1_Mur3 LINE L1 -6900 828 723 9 1343 226 312 77 13 chrX 99404145 99404301 -67245995 - L1_Mur3 LINE L1 -6989 739 574 9 1343 695 229 83 33 chrX 99404917 99405098 -67245198 - B3A SINE B2 0 198 9 9 1343 592 154 27 0 chrX 99405122 99405232 -67245064 - B1_Mur2 SINE Alu 0 149 37 9 1343 363 282 151 16 chrX 99405281 99405407 -67244889 + B3A SINE B2 1 143 -55 9 1343 1731 154 5 95 chrX 99405396 99405776 -67244520 - ORR1B1 LTR MaLR -8 386 41 9 1343 516 130 0 0 chrX 99405812 99405904 -67244392 + (CA)n Simple_repeat Simple_repeat 1 92 0 9 1343 586 219 213 30 chrX 99405945 99406114 -67244182 + B3 SINE B2 7 206 -10 9 1343 1140 88 0 0 chrX 99406177 99406324 -67243972 + B1_Mus1 SINE Alu 2 148 0 9 1343 223 28 27 27 chrX 99406324 99406361 -67243935 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 9 1343 644 144 0 0 chrX 99406361 99406465 -67243831 + B3 SINE B2 27 130 -86 9 1343 3348 62 0 0 chrX 99406522 99406974 -67243322 - L1Md_F2 LINE L1 0 6582 6161 9 1343 660 150 0 0 chrX 99407094 99407207 -67243089 + CT-rich Low_complexity Low_complexity 4 116 0 9 1343 320 271 61 30 chrX 99407222 99407321 -67242975 - PB1D10 SINE Alu -13 104 3 9 1343 594 262 0 41 chrX 99407321 99407516 -67242780 - L1MB4 LINE L1 -211 5969 5783 9 1343 435 255 248 0 chrX 99407523 99407676 -67242620 - L1MB4 LINE L1 -509 5674 5484 9 1343 301 216 26 26 chrX 99407677 99407753 -67242543 - ID4 SINE ID -3 80 5 9 1343 361 200 84 0 chrX 99407918 99408013 -67242283 - L1MB4 LINE L1 -743 5440 5338 9 1343 332 202 149 19 chrX 99408033 99408150 -67242146 - B1F1 SINE Alu -2 147 7 9 1343 455 261 57 29 chrX 99408164 99408373 -67241923 - L1MB4 LINE L1 -821 5325 5111 9 1343 297 0 0 0 chrX 99408434 99408467 -67241829 + (TG)n Simple_repeat Simple_repeat 1 33 0 9 1343 378 0 0 0 chrX 99408467 99408508 -67241788 + (GA)n Simple_repeat Simple_repeat 1 42 0 9 1343 377 203 54 0 chrX 99408513 99408587 -67241709 - PB1D10 SINE Alu -31 86 9 9 1343 252 312 0 15 chrX 99408534 99408599 -67241697 - B4A SINE B4 -146 146 83 9 1343 1007 214 206 17 chrX 99408610 99408937 -67241359 + MTD LTR MaLR 28 399 -20 9 1343 271 193 0 0 chrX 99409007 99409064 -67241232 - RMER10B LTR ERVL 0 398 342 9 1343 233 78 14 86 chrX 99409067 99409137 -67241159 + (TA)n Simple_repeat Simple_repeat 1 65 0 9 1343 1028 171 123 94 chrX 99409139 99409480 -67240816 - RMER10B LTR ERVL -47 351 1 9 1343 26 30 0 0 chrX 99409480 99409513 -67240783 + AT_rich Low_complexity Low_complexity 1 33 0 9 1343 743 256 24 24 chrX 99409513 99409725 -67240571 - B3 SINE B2 0 216 5 9 1343 425 65 319 53 chrX 99409820 99409933 -67240363 - B2_Mm2 SINE B2 -6 189 47 9 1343 952 75 95 7 chrX 99409990 99410138 -67240158 - B2_Mm1t SINE B2 -31 162 2 9 1343 184 95 45 45 chrX 99410158 99410202 -67240094 + T-rich Low_complexity Low_complexity 5 48 0 9 1343 1568 32 32 0 chrX 99410228 99410414 -67239882 - B2_Mm1t SINE B2 0 193 2 9 1343 445 207 60 51 chrX 99410426 99410543 -67239753 - B1_Mur1 SINE Alu -17 132 15 9 1343 297 136 0 0 chrX 99410616 99410682 -67239614 + (T)n Simple_repeat Simple_repeat 1 66 0 9 1343 1242 48 0 0 chrX 99410683 99410830 -67239466 - B1_Mus2 SINE Alu 0 147 1 9 1343 613 207 198 16 chrX 99410834 99411016 -67239280 - B3 SINE B2 0 216 2 1 1343 573 245 44 54 chrX 99411016 99411172 -67239124 - B3 SINE B2 -1 215 63 1 1343 1208 43 0 0 chrX 99411172 99411313 -67238983 - B1_Mus2 SINE Alu -5 142 2 1 1343 573 245 44 54 chrX 99411313 99411359 -67238937 - B3 SINE B2 -154 62 15 1 1343 437 271 34 48 chrX 99411395 99411542 -67238754 - B3A SINE B2 -16 182 38 1 1343 473 249 50 19 chrX 99411565 99411709 -67238587 - ID_B1 SINE B4 -60 232 84 1 1343 463 214 0 0 chrX 99411898 99411987 -67238309 - B3 SINE B2 -87 129 41 1 1343 699 238 0 7 chrX 99412026 99412170 -67238126 - B1_Mur1 SINE Alu -1 148 6 1 1343 22 0 0 0 chrX 99412178 99412200 -67238096 + AT_rich Low_complexity Low_complexity 1 22 0 1 1343 2681 154 53 12 chrX 99412200 99412687 -67237609 - Lx LINE L1 -4 7640 7134 1 1343 5092 93 72 4 chrX 99412705 99413442 -67236854 - Lx LINE L1 -6 6648 5862 1 1343 399 41 0 0 chrX 99413466 99413515 -67236781 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 1343 225 133 0 0 chrX 99413515 99413560 -67236736 - B1_Mus2 SINE Alu 0 147 103 1 1343 732 145 15 24 chrX 99413578 99413726 -67236570 - B1_Mus2 SINE Alu -1 146 2 1 1343 1104 84 0 0 chrX 99413896 99414039 -67236257 - B1_Mus1 SINE Alu -2 146 4 1 1343 1326 78 0 0 chrX 99414049 99414229 -67236067 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1343 642 197 61 0 chrX 99414247 99414379 -67235917 - B1_Mus2 SINE Alu -7 140 1 1 1343 361 279 9 35 chrX 99414439 99414554 -67235742 - PB1D10 SINE Alu -5 112 1 1 1343 674 265 81 10 chrX 99414580 99414778 -67235518 - B3 SINE B2 0 216 5 1 1343 305 354 55 9 chrX 99414778 99414995 -67235301 - L1MC LINE L1 -1006 5140 4914 1 1343 406 162 267 0 chrX 99415006 99415111 -67235185 - Lx2 LINE L1 -1 6996 6864 1 1343 1217 109 17 0 chrX 99415119 99415294 -67235002 - B2_Mm1t SINE B2 -14 179 2 1 1343 347 320 19 0 chrX 99415316 99415419 -67234877 - PB1 SINE Alu -20 107 3 1 1343 517 333 28 42 chrX 99415454 99415541 -67234755 + B3 SINE B2 1 84 -132 1 1343 1814 122 3 42 chrX 99415541 99415849 -67234447 + Lx LINE L1 6347 6642 -12 1 1343 517 333 28 42 chrX 99415849 99415974 -67234322 + B3 SINE B2 85 210 -6 1 1343 224 314 43 0 chrX 99416005 99416075 -67234221 + ID4 SINE ID 8 80 -3 1 1343 224 227 14 43 chrX 99416075 99416144 -67234152 + GA-rich Low_complexity Low_complexity 1 67 0 1 1343 291 60 386 46 chrX 99416214 99416315 -67233981 - B2_Mm2 SINE B2 -14 181 47 1 1343 1082 111 0 23 chrX 99416384 99416560 -67233736 - B2_Mm2 SINE B2 -21 174 3 1 1343 240 163 0 0 chrX 99416580 99416623 -67233673 + GA-rich Low_complexity Low_complexity 2 44 0 1 1343 228 304 78 10 chrX 99417100 99417203 -67233093 - B1F SINE Alu 0 149 40 1 1343 637 97 0 0 chrX 99417231 99417324 -67232972 - B2_Mm2 SINE B2 -101 94 2 1 1343 301 289 113 0 chrX 99417561 99417658 -67232638 + ID_B1 SINE B4 106 213 -11 1 1343 640 195 95 31 chrX 99417708 99417877 -67232419 - B3 SINE B2 0 216 48 1 1343 1016 72 0 0 chrX 99417893 99418032 -67232264 - B1_Mm SINE Alu 0 147 9 1 1343 432 312 0 18 chrX 99418047 99418161 -67232135 - PB1D10 SINE Alu -1 116 5 1 1343 484 331 6 42 chrX 99418074 99418241 -67232055 - ID_B1 SINE B4 -52 172 12 1 1343 21 36 0 0 chrX 99418243 99418271 -67232025 + AT_rich Low_complexity Low_complexity 1 28 0 1 1343 759 207 22 44 chrX 99418278 99418460 -67231836 - B3A SINE B2 -6 192 15 1 1343 380 256 33 0 chrX 99418596 99418686 -67231610 - L1M5 LINE L1 -537 5587 5495 1 1343 285 316 0 0 chrX 99418939 99419015 -67231281 - PB1D7 SINE Alu -7 113 38 1 1343 299 304 194 8 chrX 99419242 99419484 -67230812 - L1MD LINE L1 -554 5805 5519 1 1343 329 245 209 19 chrX 99419519 99419677 -67230619 + B3A SINE B2 11 198 0 1 1343 810 118 0 59 chrX 99419725 99419860 -67230436 - B1_Mus2 SINE Alu -18 129 3 1 1343 372 219 182 16 chrX 99419863 99419984 -67230312 + B3A SINE B2 58 198 0 1 1343 276 291 86 37 chrX 99419971 99419994 -67230302 - MER45R DNA Tip100 -91 1490 1464 1 1343 1323 105 15 20 chrX 99419994 99420189 -67230107 - B2_Mm2 SINE B2 -1 194 1 1 1343 276 291 86 37 chrX 99420189 99420408 -67229888 - MER45R DNA Tip100 -118 1463 1236 1 1343 530 303 39 7 chrX 99420449 99420602 -67229694 - RSINE1 SINE B4 -4 161 4 1 1343 220 171 0 0 chrX 99420742 99420777 -67229519 + polypyrimidine Low_complexity Low_complexity 1 35 0 1 1343 303 214 14 14 chrX 99420777 99420848 -67229448 - L1MA4 LINE L1 -400 5900 5830 1 1343 337 247 103 0 chrX 99420850 99420947 -67229349 - ID_B1 SINE B4 0 224 118 1 1343 250 307 149 0 chrX 99420856 99420970 -67229326 - B1_Mur1 SINE Alu -6 143 13 1 1343 1382 62 67 0 chrX 99421019 99421178 -67229118 + B2_Mm1t SINE B2 2 160 -33 1 1343 333 0 0 0 chrX 99421178 99421215 -67229081 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 1 1343 1382 62 67 0 chrX 99421215 99421234 -67229062 + B2_Mm1t SINE B2 161 190 -3 1 1343 1232 54 0 0 chrX 99421236 99421383 -67228913 + B1_Mus2 SINE Alu 1 147 0 1 1343 248 220 20 0 chrX 99421399 99421449 -67228847 + MTEa LTR MaLR 39 89 -290 1 1343 360 184 0 0 chrX 99421456 99421559 -67228737 + CT-rich Low_complexity Low_complexity 2 104 0 1 1343 2161 191 107 44 chrX 99421609 99421648 -67228648 - RMER15 LTR ERVL 0 575 533 1 1343 306 0 0 0 chrX 99421648 99421682 -67228614 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1343 2161 191 107 44 chrX 99421682 99422183 -67228113 - RMER15 LTR ERVL -43 532 2 1 1343 589 329 38 14 chrX 99422257 99422470 -67227826 + MT2A LTR ERVL 245 462 -71 1 1343 4198 35 2 0 chrX 99422509 99422998 -67227298 - L1Md_T LINE L1 -2 6580 6091 1 1343 1051 111 98 17 chrX 99423198 99423372 -67226924 + B2_Mm2 SINE B2 2 189 -6 1 1343 382 318 31 38 chrX 99423372 99423533 -67226763 - B3A SINE B2 0 216 57 1 1343 680 214 15 0 chrX 99423613 99423744 -67226552 + B1_Mur1 SINE Alu 5 137 -12 1 1343 422 36 18 0 chrX 99423753 99423809 -67226487 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1343 267 31 0 0 chrX 99423809 99423841 -67226455 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1343 659 260 35 96 chrX 99423859 99424089 -67226207 - MTE2a LTR MaLR -72 307 92 1 1343 477 0 0 0 chrX 99424198 99424251 -67226045 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1343 432 0 0 0 chrX 99424251 99424298 -67225998 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 1343 1214 223 164 94 chrX 99424298 99424714 -67225582 - MT2A LTR ERVL -88 445 1 1 1343 425 227 52 87 chrX 99424827 99425035 -67225261 - L1MA4 LINE L1 -212 5959 5754 1 1343 290 150 0 52 chrX 99425048 99425123 -67225173 - L1MA4 LINE L1 -752 5432 5355 1 1343 186 103 0 0 chrX 99425137 99425166 -67225130 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1343 511 203 7 185 chrX 99425166 99425246 -67225050 - ID_B1 SINE B4 -1 223 165 1 1343 5644 204 47 45 chrX 99425246 99426613 -67223683 + ORR1C2-int LTR MaLR 1 1370 0 1 1343 2111 138 80 19 chrX 99426613 99426975 -67223321 + ORR1C2 LTR MaLR 1 384 0 1 1343 511 203 7 185 chrX 99426975 99427044 -67223252 - ID_B1 SINE B4 -60 164 101 1 1343 285 208 0 0 chrX 99427089 99427142 -67223154 - L1MDb LINE L1 -713 5927 5875 1 1343 337 273 0 0 chrX 99427142 99427230 -67223066 - PB1D9 SINE Alu 0 120 33 1 1343 234 0 0 0 chrX 99427232 99427258 -67223038 + (CTG)n Simple_repeat Simple_repeat 1 26 0 1 1343 276 30 0 0 chrX 99427300 99427333 -67222963 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1343 874 221 34 1 chrX 99427333 99427574 -67222722 - L1MDb LINE L1 -894 5863 5616 1 1343 326 297 39 78 chrX 99427993 99428121 -67222175 + RSINE1 SINE B4 4 126 -39 1 1343 379 241 98 14 chrX 99428124 99428267 -67222029 - L1MDb LINE L1 -952 5592 5438 1 1343 306 167 0 0 chrX 99428272 99428320 -67221976 - HAL1-3A_ME LINE L1 -835 2023 1976 1 1343 342 0 0 0 chrX 99428321 99428359 -67221937 + (TATG)n Simple_repeat Simple_repeat 1 38 0 1 1343 261 247 82 47 chrX 99428359 99428444 -67221852 - PB1D10 SINE Alu -27 90 3 1 1343 246 267 89 0 chrX 99428375 99428465 -67221831 - MT2B2 LTR ERVL -348 236 139 1 1343 517 203 35 21 chrX 99428467 99428608 -67221688 - L1MDb LINE L1 -1223 5321 5179 1 1343 711 206 7 7 chrX 99428745 99428887 -67221409 - B1_Mur1 SINE Alu -5 144 3 1 1343 248 297 33 0 chrX 99428811 99428902 -67221394 - B4A SINE B4 -128 164 71 1 1343 360 157 29 0 chrX 99428900 99428970 -67221326 - B1F2 SINE Alu -51 98 27 1 1343 777 251 60 5 chrX 99429123 99429323 -67220973 - ID_B1 SINE B4 -8 216 6 1 1343 288 0 0 0 chrX 99429338 99429370 -67220926 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 1 1343 1539 32 21 16 chrX 99429447 99429637 -67220659 - B2_Mm1a SINE B2 -1 192 2 1 1343 418 229 83 28 chrX 99429684 99429828 -67220468 - L1MDb LINE L1 -1889 4655 4504 1 1343 506 335 39 6 chrX 99429828 99430008 -67220288 + B3A SINE B2 13 198 0 1 1343 229 200 0 0 chrX 99430037 99430082 -67220214 + PB1D10 SINE Alu 70 114 -3 1 1343 280 256 21 63 chrX 99430094 99430240 -67220056 + PB1D10 SINE Alu 1 146 -3 1 1343 291 239 0 14 chrX 99430318 99430390 -67219906 - ID4 SINE ID -11 72 2 1 1343 2109 80 63 0 chrX 99430501 99430800 -67219496 + L1_Mus3 LINE L1 6317 6634 -4 1 1343 1073 208 5 0 chrX 99430830 99431022 -67219274 - B3 SINE B2 -23 193 1 1 1343 902 161 0 0 chrX 99431030 99431173 -67219123 - B1_Mur2 SINE Alu -5 144 2 1 1343 220 241 98 98 chrX 99431283 99431301 -67218995 - B1_Mur3 SINE Alu -27 122 107 1 1343 205 29 59 0 chrX 99431301 99431335 -67218961 + (TTG)n Simple_repeat Simple_repeat 2 37 0 1 1343 284 227 104 17 chrX 99431335 99431427 -67218869 - PB1D10 SINE Alu -43 106 10 1 1343 489 262 18 86 chrX 99431437 99431583 -67218713 - L1MC LINE L1 -2295 3851 3713 1 1343 526 274 7 7 chrX 99431583 99431719 -67218577 - B1_Mur2 SINE Alu -13 136 1 1 1343 489 262 18 86 chrX 99431719 99431793 -67218503 - L1MC LINE L1 -2434 3712 3646 1 1343 342 61 0 0 chrX 99431842 99431891 -67218405 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 1343 980 212 67 0 chrX 99431935 99432128 -67218168 + B3 SINE B2 4 209 -7 1 1343 225 222 35 53 chrX 99432196 99432253 -67218043 + ID_B1 SINE B4 80 135 -89 1 1343 1190 264 52 31 chrX 99432262 99432719 -67217577 - L1MDb LINE L1 -2570 3974 3508 1 1343 276 30 0 0 chrX 99432734 99432767 -67217529 + (TTG)n Simple_repeat Simple_repeat 3 35 0 1 1343 671 304 19 0 chrX 99432832 99433046 -67217250 - ID_B1 SINE B4 -4 220 3 1 1343 238 271 29 0 chrX 99433047 99433117 -67217179 - L1M2 LINE L1 -696 5607 5536 1 1343 643 190 210 11 chrX 99433183 99433359 -67216937 - B3 SINE B2 -2 214 4 1 1343 355 202 67 50 chrX 99433399 99433519 -67216777 - B1F SINE Alu -3 146 25 1 1343 1099 73 53 58 chrX 99433540 99433728 -67216568 - B2_Mm2 SINE B2 -7 188 2 1 1343 403 283 0 7 chrX 99433729 99433868 -67216428 - L1M2 LINE L1 -850 5293 5156 1 1343 409 256 104 88 chrX 99434089 99434282 -67216014 - B3 SINE B2 -13 203 8 1 1343 22 0 0 0 chrX 99434313 99434335 -67215961 + AT_rich Low_complexity Low_complexity 1 22 0 1 1343 408 274 36 98 chrX 99434417 99434611 -67215685 - ID_B1 SINE B4 -42 182 1 1 1343 274 309 40 8 chrX 99434652 99434776 -67215520 - L1MDb LINE L1 -5370 1177 1050 1 1343 225 94 0 0 chrX 99434808 99434840 -67215456 + (CACCAT)n Simple_repeat Simple_repeat 1 32 0 1 1343 906 162 0 26 chrX 99434840 99434992 -67215304 - B1_Mur3 SINE Alu 0 149 2 1 1343 324 0 0 0 chrX 99435004 99435040 -67215256 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1343 633 265 31 6 chrX 99435041 99435204 -67215092 - B3A SINE B2 -30 168 2 1 1343 641 271 52 17 chrX 99435241 99435414 -67214882 + B3 SINE B2 30 208 -8 1 1343 724 292 17 34 chrX 99435425 99435659 -67214637 - L1MDb LINE L1 -5508 1039 810 1 1343 1321 119 0 20 chrX 99435946 99436144 -67214152 - B2_Mm2 SINE B2 0 195 2 1 1343 259 279 0 25 chrX 99436257 99436338 -67213958 - L1MDb LINE L1 -6442 105 27 1 1343 636 288 141 0 chrX 99436407 99436584 -67213712 + B3 SINE B2 2 203 -13 1 1343 632 179 65 0 chrX 99436643 99436766 -67213530 + B1_Mur1 SINE Alu 9 139 -10 1 1343 510 133 179 9 chrX 99436799 99436905 -67213391 + B1_Mur2 SINE Alu 6 129 -20 1 1343 2059 253 16 19 chrX 99436994 99437509 -67212787 + Lx7 LINE L1 6808 7320 -376 1 1343 313 102 14 28 chrX 99437514 99437560 -67212736 + (TTTG)n Simple_repeat Simple_repeat 1 47 0 1 1343 1061 65 50 0 chrX 99437560 99437699 -67212597 - B1_Mus2 SINE Alu -1 146 1 1 1343 313 102 14 28 chrX 99437699 99437723 -67212573 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1 1343 35 54 0 0 chrX 99437773 99437829 -67212467 + AT_rich Low_complexity Low_complexity 1 56 0 1 1343 305 250 23 81 chrX 99437829 99437916 -67212380 + ID2 SINE ID 2 83 0 1 1343 892 238 34 14 chrX 99438112 99438321 -67211975 - B3 SINE B2 -3 213 1 1 1343 638 220 68 0 chrX 99438363 99438495 -67211801 - B1_Mur1 SINE Alu -6 143 3 1 1343 360 0 0 0 chrX 99438506 99438546 -67211750 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1 1343 964 108 82 29 chrX 99438553 99438724 -67211572 - B2_Mm2 SINE B2 -14 181 2 1 1343 780 196 7 20 chrX 99438726 99438877 -67211419 - B1_Mur1 SINE Alu 0 149 1 1 1343 450 0 0 0 chrX 99438883 99438933 -67211363 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1343 376 253 0 0 chrX 99438947 99439038 -67211258 - PB1D10 SINE Alu -5 112 22 1 1343 540 268 21 48 chrX 99439079 99439224 -67211072 + B1F1 SINE Alu 9 149 0 1 1343 284 204 185 46 chrX 99439913 99440021 -67210275 + MLT2B3 LTR ERVL 14 136 -418 1 1343 306 0 0 0 chrX 99440097 99440131 -67210165 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 1343 180 0 0 0 chrX 99440131 99440150 -67210146 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 1343 210 71 0 0 chrX 99440182 99440210 -67210086 + (TCC)n Simple_repeat Simple_repeat 3 30 0 1 1343 827 199 7 0 chrX 99440212 99440358 -67209938 - B1_Mus2 SINE Alu 0 147 1 1 1343 187 317 48 12 chrX 99440412 99440495 -67209801 + L2 LINE L2 187 272 -3147 1 1343 216 250 22 111 chrX 99440731 99440821 -67209475 - B2_Mm2 SINE B2 -74 121 40 1 1343 282 56 0 0 chrX 99440849 99440885 -67209411 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1 1343 903 45 0 0 chrX 99441050 99441162 -67209134 + (TTTTC)n Simple_repeat Simple_repeat 2 113 0 1 1343 556 192 0 19 chrX 99441162 99441268 -67209028 - B1F2 SINE Alu -10 139 36 1 1343 312 221 14 14 chrX 99441312 99441381 -67208915 - ID4 SINE ID -14 69 1 1 1343 1012 159 55 0 chrX 99442195 99442377 -67207919 - B3 SINE B2 -12 204 13 1 1343 196 262 45 15 chrX 99443854 99443920 -67206376 + MIRb SINE MIR 114 181 -87 1 1343 21 36 0 0 chrX 99446686 99446714 -67203582 + GC_rich Low_complexity Low_complexity 1 28 0 1 1343 189 0 0 0 chrX 99447011 99447032 -67203264 + (CCGCG)n Simple_repeat Simple_repeat 4 24 0 1 1343 225 0 0 0 chrX 99450064 99450089 -67200207 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1343 1253 34 0 0 chrX 99450089 99450236 -67200060 - B1_Mm SINE Alu 0 147 1 1 1343 316 289 49 62 chrX 99450289 99450433 -67199863 + MIR SINE MIR 13 154 -108 1 1343 960 101 0 69 chrX 99450762 99450921 -67199375 - B1_Mur4 SINE Alu -1 149 2 1 1343 746 181 150 17 chrX 99451027 99451207 -67199089 - B3 SINE B2 -12 204 1 1 1343 498 237 70 0 chrX 99451239 99451353 -67198943 + B1F SINE Alu 1 122 -27 1 1343 222 176 39 0 chrX 99451326 99451377 -67198919 + B1_Mm SINE Alu 64 116 -31 1 1343 24 0 0 0 chrX 99451377 99451401 -67198895 + AT_rich Low_complexity Low_complexity 1 24 0 1 1343 283 260 241 99 chrX 99451734 99451875 -67198421 - RSINE1 SINE B4 0 165 5 1 1343 774 231 0 7 chrX 99451934 99452082 -67198214 - B1_Mus2 SINE Alu 0 147 1 1 1343 292 341 0 11 chrX 99452150 99452242 -67198054 - PB1D10 SINE Alu -2 115 25 1 1343 306 227 43 43 chrX 99452256 99452371 -67197925 + L1ME4a LINE L1 5956 6070 -54 1 1343 252 247 35 23 chrX 99452471 99452558 -67197738 + L1ME4a LINE L1 5969 6056 -68 1 1343 27 0 0 0 chrX 99452569 99452596 -67197700 + AT_rich Low_complexity Low_complexity 1 27 0 1 1343 354 230 213 0 chrX 99452605 99452779 -67197517 + L1ME4a LINE L1 5898 6108 -16 1 1343 747 241 75 0 chrX 99453198 99453397 -67196899 - B3 SINE B2 0 216 3 1 1343 261 0 0 0 chrX 99453398 99453427 -67196869 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1 1343 27 0 0 0 chrX 99454256 99454283 -67196013 + AT_rich Low_complexity Low_complexity 1 27 0 1 1343 287 293 60 17 chrX 99454791 99454938 -67195358 - MIRb SINE MIR -112 156 1 1 1343 231 365 23 16 chrX 99455267 99455395 -67194901 - L2 LINE L2 -914 2505 2377 1 1343 201 333 0 17 chrX 99456513 99456571 -67193725 - MER91A DNA Tip100 -68 128 72 1 1343 221 291 130 43 chrX 99456705 99456913 -67193383 - MIR SINE MIR -9 253 28 1 1343 550 258 17 76 chrX 99457394 99457566 -67192730 + B4 SINE B4 5 166 -126 1 1343 690 244 50 11 chrX 99457564 99457746 -67192550 + B4A SINE B4 102 290 -2 1 1343 495 236 106 35 chrX 99458589 99458787 -67191509 + MIRc SINE MIR 49 260 -8 1 1343 225 331 22 88 chrX 99459763 99459899 -67190397 + L2 LINE L2 2678 2804 -615 1 1343 1136 86 0 3 chrX 99460183 99460481 -67189815 + (TTC)n Simple_repeat Simple_repeat 1 296 0 1 1343 622 194 3 0 chrX 99460481 99460616 -67189680 - B1_Mur2 SINE Alu -12 137 1 1 1343 1274 34 0 0 chrX 99460894 99461041 -67189255 - B1_Mus2 SINE Alu 0 147 1 1 1343 288 186 0 0 chrX 99461055 99461114 -67189182 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 1343 569 268 0 21 chrX 99461477 99461622 -67188674 + B1_Mur1 SINE Alu 1 142 -7 1 1343 342 0 0 0 chrX 99461642 99461680 -67188616 + (TCTG)n Simple_repeat Simple_repeat 4 41 0 1 1343 251 163 82 0 chrX 99462750 99462799 -67187497 - L1MB5 LINE L1 -9 6165 6113 1 1343 21 57 0 0 chrX 99462896 99462931 -67187365 + AT_rich Low_complexity Low_complexity 1 35 0 1 1343 2052 229 70 22 chrX 99463049 99463682 -67186614 - L1MB5 LINE L1 -229 5945 5283 1 1343 502 232 30 0 chrX 99463864 99463963 -67186333 - PB1D10 SINE Alu -6 111 10 1 1343 1316 232 205 20 chrX 99464131 99464424 -67185872 - L1MA5A LINE L1 -409 5888 5495 1 1343 387 0 0 0 chrX 99464424 99464467 -67185829 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1343 565 228 78 8 chrX 99464467 99464595 -67185701 - B1_Mur2 SINE Alu -10 139 3 1 1343 1320 239 112 15 chrX 99464595 99465061 -67185235 - L1MA5A LINE L1 -803 5494 5023 1 1343 1299 260 63 26 chrX 99465052 99465479 -67184817 - L1MB5 LINE L1 -953 5193 4751 1 1343 1088 107 5 0 chrX 99465479 99465694 -67184602 + (TTCC)n Simple_repeat Simple_repeat 1 216 0 1 1343 208 28 83 0 chrX 99465694 99465730 -67184566 + (TTTCC)n Simple_repeat Simple_repeat 2 40 0 1 1343 1157 82 0 0 chrX 99465731 99465878 -67184418 - B1_Mm SINE Alu 0 147 1 1 1343 485 228 0 24 chrX 99465907 99466027 -67184269 - B1_Mur1 SINE Alu -9 140 23 1 1343 581 164 127 32 chrX 99466073 99466230 -67184066 - L1MB5 LINE L1 -1518 4622 4451 1 1343 538 15 0 0 chrX 99466239 99466305 -67183991 + L1_Mus1 LINE L1 6500 6565 -2 1 1343 745 251 83 5 chrX 99466377 99466581 -67183715 - ID_B1 SINE B4 -4 220 1 1 1343 464 210 40 10 chrX 99466630 99466731 -67183565 + PB1D9 SINE Alu 2 105 -15 1 1343 680 44 22 0 chrX 99466755 99466846 -67183450 + (TCTA)n Simple_repeat Simple_repeat 3 95 0 1 1343 271 256 22 44 chrX 99466902 99466992 -67183304 - B4A SINE B4 -202 90 3 1 1343 411 271 24 11 chrX 99466995 99467134 -67183162 - L1MB5 LINE L1 -1765 4381 4238 1 1343 25 0 0 0 chrX 99467236 99467261 -67183035 + AT_rich Low_complexity Low_complexity 1 25 0 1 1343 8154 57 1 6 chrX 99467261 99468366 -67181930 - L1_Mus1 LINE L1 -1 6566 5468 1 1343 1386 302 51 24 chrX 99468715 99469308 -67180988 - L1MA4A LINE L1 -367 5936 5328 1 1343 207 69 0 0 chrX 99469333 99469362 -67180934 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 1343 322 253 22 22 chrX 99470076 99470165 -67180131 + PB1D10 SINE Alu 27 115 -2 1 1343 4931 92 29 26 chrX 99470312 99471051 -67179245 - L1VL2 LINE L1 -3759 2127 1368 1 1343 796 51 119 0 chrX 99471051 99471169 -67179127 + B1_Mus1 SINE Alu 7 138 -10 1 1343 224 30 30 0 chrX 99471169 99471202 -67179094 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1343 6374 77 44 12 chrX 99471202 99472134 -67178162 - L1VL2 LINE L1 -4519 1367 424 1 1343 321 319 25 17 chrX 99472132 99472371 -67177925 - L1M2 LINE L1 -801 5342 5102 1 1343 565 172 148 0 chrX 99472464 99472586 -67177710 + B1_Mur1 SINE Alu 3 142 -7 1 1343 339 254 18 26 chrX 99472623 99472736 -67177560 - L2a LINE L2 0 3426 3315 1 1343 536 266 77 7 chrX 99472850 99473005 -67177291 + B3A SINE B2 5 170 -28 1 1343 207 0 0 0 chrX 99473025 99473048 -67177248 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 1343 486 218 71 18 chrX 99473198 99473310 -67176986 - PB1D7 SINE Alu 0 120 3 1 1343 783 45 0 67 chrX 99473393 99473498 -67176798 - B1_Mus1 SINE Alu -1 147 44 1 1343 891 103 43 14 chrX 99473498 99473636 -67176660 + B1_Mur4 SINE Alu 3 144 -6 1 1343 783 45 0 67 chrX 99473636 99473649 -67176647 - B1_Mus1 SINE Alu -105 43 37 1 1343 557 277 66 100 chrX 99473671 99473972 -67176324 - B4A SINE B4 0 292 2 1 1343 1193 251 54 22 chrX 99473981 99474425 -67175871 - L1M2 LINE L1 -789 5354 4897 1 1343 383 214 0 0 chrX 99474428 99474498 -67175798 + MTE2b LTR MaLR 1 70 -309 1 1343 709 226 13 0 chrX 99474489 99474648 -67175648 + MTE2b LTR MaLR 219 379 0 1 1343 455 308 37 88 chrX 99474801 99475018 -67175278 - B4A SINE B4 0 292 87 1 1343 925 108 0 49 chrX 99475286 99475471 -67174825 + CT-rich Low_complexity Low_complexity 4 179 0 1 1343 569 264 180 0 chrX 99475529 99475696 -67174600 - ID_B1 SINE B4 -1 223 27 1 1343 396 306 10 0 chrX 99475701 99475799 -67174497 - PB1 SINE Alu -15 112 14 1 1343 228 230 128 53 chrX 99476313 99476446 -67173850 - L1MC4a LINE L1 -1668 6214 6072 1 1343 279 0 0 0 chrX 99476543 99476574 -67173722 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1343 468 180 124 4 chrX 99476717 99476826 -67173470 - PB1D10 SINE Alu -24 125 7 1 1343 1725 101 17 46 chrX 99477095 99477397 -67172899 + Lx3B LINE L1 6681 6973 0 1 1343 316 213 108 20 chrX 99477438 99477581 -67172715 + MIRb SINE MIR 7 174 -94 1 1343 260 221 78 47 chrX 99477913 99478041 -67172255 - Lx8 LINE L1 -9 7464 7333 1 1343 405 0 0 0 chrX 99478153 99478198 -67172098 + (CAGG)n Simple_repeat Simple_repeat 2 46 0 1 1343 213 305 10 21 chrX 99478513 99478610 -67171686 + T-rich Low_complexity Low_complexity 4 99 0 1 1343 249 248 103 56 chrX 99480735 99480842 -67169454 + MLT1H LTR MaLR 381 492 -57 1 1343 522 31 0 0 chrX 99480844 99480908 -67169388 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 1343 247 306 0 0 chrX 99481395 99481457 -67168839 - ID4 SINE ID -5 78 17 1 1343 281 47 0 23 chrX 99481535 99481579 -67168717 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1343 656 68 0 10 chrX 99481623 99481727 -67168569 + (CA)n Simple_repeat Simple_repeat 2 104 0 1 1343 1108 267 119 52 chrX 99481877 99483000 -67167296 - L1MD2 LINE L1 -67 6292 5101 1 1344 283 148 177 0 chrX 99483901 99483977 -67166319 + B1_Mur2 SINE Alu 6 113 -36 1 1344 431 246 78 0 chrX 99484430 99484572 -67165724 - L1M LINE L1 -934 5410 5258 1 1344 1199 48 14 0 chrX 99485459 99485604 -67164692 - B1_Mus2 SINE Alu 0 147 1 1 1344 282 277 0 0 chrX 99485608 99485673 -67164623 + L2b LINE L2 3286 3350 -25 1 1344 22 0 0 0 chrX 99485835 99485857 -67164439 + AT_rich Low_complexity Low_complexity 1 22 0 1 1344 564 197 78 16 chrX 99485913 99486042 -67164254 - B1_Mur2 SINE Alu -12 137 1 1 1344 330 271 73 8 chrX 99487167 99487290 -67163006 - B1F SINE Alu -18 131 1 1 1344 444 139 0 0 chrX 99489072 99489151 -67161145 + (TG)n Simple_repeat Simple_repeat 1 79 0 1 1344 306 73 0 0 chrX 99489797 99489838 -67160458 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1344 318 308 80 33 chrX 99490423 99490574 -67159722 + L2a LINE L2 3268 3425 -1 1 1344 212 271 13 67 chrX 99490693 99490768 -67159528 + B4A SINE B4 74 144 -148 1 1344 210 222 0 0 chrX 99490769 99490814 -67159482 + (CAGG)n Simple_repeat Simple_repeat 2 46 0 1 1344 214 210 136 61 chrX 99490814 99490880 -67159416 + PB1D10 SINE Alu 40 110 -7 1 1344 260 318 23 23 chrX 99490882 99490969 -67159327 + L1MDa LINE L1 641 727 -5906 1 1344 449 219 50 16 chrX 99491061 99491179 -67159117 + B1F SINE Alu 10 131 -18 1 1344 553 252 0 16 chrX 99491179 99491304 -67158992 + MT2A LTR ERVL 1 123 -410 1 1344 489 211 49 19 chrX 99491328 99491574 -67158722 + MT2A LTR ERVL 99 494 -39 1 1344 382 96 27 0 chrX 99491575 99491648 -67158648 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 1344 592 205 24 8 chrX 99491810 99491933 -67158363 - RSINE1 SINE B4 -31 134 10 1 1344 192 111 0 0 chrX 99491960 99491996 -67158300 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1344 252 279 128 0 chrX 99492005 99492091 -67158205 - B1F SINE Alu -52 97 1 1 1344 718 32 0 0 chrX 99492203 99492298 -67157998 - BC1_Mm scRNA scRNA -57 95 1 1 1344 844 245 10 60 chrX 99492427 99492720 -67157576 - L1MD LINE L1 -1860 4286 4005 1 1344 393 313 38 0 chrX 99492760 99492878 -67157418 + B1F SINE Alu 9 131 -18 1 1344 282 325 150 64 chrX 99492878 99493144 -67157152 + B4A SINE B4 2 290 -2 1 1344 375 252 32 32 chrX 99493267 99493390 -67156906 - L1MD LINE L1 -2532 3614 3492 1 1344 1200 244 35 3 chrX 99493385 99493701 -67156595 - L1MD LINE L1 -3325 2821 2496 1 1344 1233 62 11 6 chrX 99493711 99493888 -67156408 + (TCTCC)n Simple_repeat Simple_repeat 3 180 0 1 1344 241 288 15 0 chrX 99493907 99493973 -67156323 - ID4_ SINE ID -14 69 3 1 1344 241 262 35 23 chrX 99493997 99494083 -67156213 - L1MD LINE L1 -3656 2490 2404 1 1344 491 241 9 9 chrX 99494117 99494226 -67156070 + PB1D10 SINE Alu 1 109 -8 1 1344 23 0 0 0 chrX 99494320 99494343 -67155953 + AT_rich Low_complexity Low_complexity 1 23 0 1 1344 546 242 19 13 chrX 99494352 99494511 -67155785 + L1MD LINE L1 4514 4673 -1473 1 1344 478 308 20 53 chrX 99494548 99494699 -67155597 - RSINE1 SINE B4 -8 157 12 1 1344 432 231 19 0 chrX 99494719 99494827 -67155469 - PB1D10 SINE Alu -6 111 2 1 1344 304 284 142 0 chrX 99494830 99494964 -67155332 + L1MD LINE L1 4676 4828 -1318 1 1344 252 237 144 0 chrX 99495874 99495971 -67154325 - L1ME4a LINE L1 0 6124 6014 1 1344 542 252 0 0 chrX 99496003 99496110 -67154186 + PB1D10 SINE Alu 5 111 -6 1 1344 306 0 0 0 chrX 99497435 99497469 -67152827 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1344 293 214 21 0 chrX 99498571 99498653 -67151643 + MIRb SINE MIR 91 177 -91 1 1344 381 200 102 4 chrX 99499418 99499540 -67150756 - B3 SINE B2 0 198 59 1 1344 245 161 18 18 chrX 99499736 99499793 -67150503 + A-rich Low_complexity Low_complexity 3 59 0 1 1344 268 378 58 71 chrX 99500545 99500941 -67149355 - L3 LINE CR1 -96 4393 4003 1 1344 298 318 9 9 chrX 99500945 99501053 -67149243 - L3 LINE CR1 -595 3894 3787 1 1344 246 261 0 0 chrX 99502158 99502204 -67148092 + (CACG)n Simple_repeat Simple_repeat 4 49 0 2 1344 239 306 64 50 chrX 99507030 99507171 -67143125 - MIR SINE MIR -4 258 116 3 1344 231 317 77 0 chrX 99507422 99507526 -67142770 + L2a LINE L2 3315 3426 0 4 1344 1268 148 28 9 chrX 99508167 99508379 -67141917 - B3 SINE B2 0 216 1 5 1344 229 301 35 35 chrX 99508664 99508750 -67141546 + L2b LINE L2 3288 3373 -2 6 1344 264 262 24 24 chrX 99510496 99510578 -67139718 - ID4_ SINE ID 0 83 2 7 1344 23 33 0 0 chrX 99510598 99510628 -67139668 + AT_rich Low_complexity Low_complexity 1 30 0 8 1344 21 0 0 0 chrX 99511004 99511025 -67139271 + AT_rich Low_complexity Low_complexity 1 21 0 9 1344 567 357 16 12 chrX 99511145 99511389 -67138907 + MIR SINE MIR 15 259 -3 1 1344 226 236 55 0 chrX 99511658 99511713 -67138583 + MIR SINE MIR 186 243 -19 1 1344 198 0 0 0 chrX 99511979 99512001 -67138295 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1344 230 283 69 29 chrX 99512461 99512563 -67137733 + MT2B2 LTR ERVL 155 260 -324 1 1344 500 193 89 0 chrX 99512472 99512597 -67137699 + B1F SINE Alu 7 141 -8 1 1344 338 221 10 122 chrX 99513786 99513884 -67136412 + PB1D10 SINE Alu 26 112 -5 1 1344 186 274 48 16 chrX 99514169 99514232 -67136064 - L2c LINE L2 -25 3362 3298 1 1344 256 302 20 20 chrX 99515747 99515845 -67134451 + MIRc SINE MIR 104 201 -67 1 1344 182 341 45 37 chrX 99516532 99516666 -67133630 + L2c LINE L2 3020 3154 -233 1 1344 394 211 0 0 chrX 99518219 99518290 -67132006 + ID4_ SINE ID 2 72 -11 1 1344 228 257 26 71 chrX 99518356 99518469 -67131827 + L1MC5 LINE L1 7814 7921 -40 2 1344 216 247 101 101 chrX 99518874 99518997 -67131299 - L2a LINE L2 0 3426 3309 2 1344 1438 137 14 0 chrX 99518997 99519216 -67131080 - URR1B DNA MER1_type -3 222 1 2 1344 216 247 101 101 chrX 99519216 99519281 -67131015 - L2a LINE L2 -118 3308 3238 2 1344 416 275 74 23 chrX 99519924 99520099 -67130197 - MIRb SINE MIR -58 210 27 2 1344 884 223 159 24 chrX 99520168 99520457 -67129839 - L1MB7 LINE L1 -48 6136 5809 2 1344 267 152 0 0 chrX 99520549 99520595 -67129701 + CT-rich Low_complexity Low_complexity 2 47 0 2 1344 964 274 66 3 chrX 99520628 99520932 -67129364 + MER2 DNA MER2_type 16 338 -7 2 1344 6706 63 14 17 chrX 99520995 99521869 -67128427 + L1_Mus4 LINE L1 5766 6636 0 2 1344 303 260 50 30 chrX 99521869 99521968 -67128328 - L1MB7 LINE L1 -598 5586 5486 2 1344 217 300 27 41 chrX 99522085 99522158 -67128138 - ID4 SINE ID -3 80 9 2 1344 273 134 80 68 chrX 99522158 99522246 -67128050 - L1M4 LINE L1 -2437 3709 3621 2 1344 384 293 168 23 chrX 99522297 99522517 -67127779 - MLT2B1 LTR ERVL -230 290 39 3 1344 222 37 0 0 chrX 99522518 99522545 -67127751 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1344 24 0 0 0 chrX 99522639 99522663 -67127633 + AT_rich Low_complexity Low_complexity 1 24 0 3 1344 25 0 0 0 chrX 99522696 99522721 -67127575 + AT_rich Low_complexity Low_complexity 1 25 0 3 1344 1312 31 12 0 chrX 99522721 99522883 -67127413 - L1_Mus1 LINE L1 -1 6566 6403 3 1344 497 175 58 10 chrX 99522885 99522989 -67127307 + B1_Mur4 SINE Alu 31 139 -11 3 1344 252 222 50 141 chrX 99523002 99523016 -67127280 - L1M4 LINE L1 -2967 3179 3168 3 1344 574 225 117 103 chrX 99523016 99523229 -67127067 - B3 SINE B2 0 216 1 3 1344 252 222 50 141 chrX 99523229 99523478 -67126818 - L1M4 LINE L1 -2979 3167 2941 3 1344 3028 40 3 13 chrX 99523478 99523859 -67126437 - L1Md_F2 LINE L1 -12 6570 6194 3 1344 252 222 50 141 chrX 99523859 99523914 -67126382 - L1M4 LINE L1 -3206 2940 2889 3 1344 373 177 0 49 chrX 99524044 99524147 -67126149 - L1M4 LINE L1 -3240 2906 2809 3 1344 663 13 0 0 chrX 99524147 99524223 -67126073 + (TTCC)n Simple_repeat Simple_repeat 1 76 0 3 1344 640 209 8 30 chrX 99524226 99524359 -67125937 - B1_Mur1 SINE Alu -14 135 6 4 1344 343 320 47 39 chrX 99524246 99524373 -67125923 - B4 SINE B4 -88 204 77 4 1344 320 216 114 0 chrX 99524394 99524482 -67125814 - L1M4c LINE L1 -3364 3018 2921 4 1344 512 229 88 45 chrX 99524514 99524853 -67125443 - L1M4c LINE L1 -3541 2841 2412 4 1344 2322 56 3 0 chrX 99524961 99525245 -67125051 - L1_Mus1 LINE L1 0 6567 6283 4 1344 389 321 7 37 chrX 99525245 99525381 -67124915 - ID_B1 SINE B4 -89 135 4 4 1344 272 133 0 0 chrX 99525678 99525723 -67124573 - PB1D9 SINE Alu -2 118 74 4 1344 309 214 18 88 chrX 99525740 99525853 -67124443 - L1M4c LINE L1 -4239 2145 2041 4 1344 219 235 86 29 chrX 99525952 99526022 -67124274 - PB1D10 SINE Alu -1 116 43 4 1344 257 258 47 47 chrX 99526033 99526139 -67124157 - L1M4c LINE L1 -4552 1832 1727 4 1344 243 278 28 0 chrX 99526155 99526227 -67124069 - ID4_ SINE ID -9 74 1 4 1344 840 111 0 0 chrX 99526240 99526366 -67123930 + (TTTC)n Simple_repeat Simple_repeat 1 126 0 4 1344 995 76 30 0 chrX 99526369 99526501 -67123795 - B1_Mm SINE Alu -11 136 1 4 1344 835 137 49 21 chrX 99526529 99526671 -67123625 - B1_Mus2 SINE Alu 0 147 2 5 1344 21474 82 15 14 chrX 99526804 99530627 -67119669 + L1Md_F2 LINE L1 203 4027 -1856 5 1344 7840 60 1 9 chrX 99530627 99531609 -67118687 + L1Md_F2 LINE L1 5597 6570 -12 5 1344 843 286 71 40 chrX 99531617 99532247 -67118049 - L1M4 LINE L1 -5103 2231 1569 5 1344 787 237 70 5 chrX 99532247 99532446 -67117850 + B3 SINE B2 2 213 -3 5 1344 843 286 56 51 chrX 99532446 99532517 -67117779 - L1M4 LINE L1 -5336 1568 1487 5 1344 285 210 0 0 chrX 99532556 99532618 -67117678 + (TA)n Simple_repeat Simple_repeat 1 62 0 5 1344 552 294 33 0 chrX 99532697 99532850 -67117446 - RSINE1 SINE B4 -3 162 5 5 1344 530 295 47 47 chrX 99532852 99533087 -67117209 - L1M4 LINE L1 -6067 837 603 5 1344 327 235 51 0 chrX 99533097 99533195 -67117101 - PB1 SINE Alu -2 125 23 5 1344 495 290 36 14 chrX 99533188 99533328 -67116968 + MER58A DNA MER1_type 14 156 -68 5 1344 950 250 9 18 chrX 99533400 99533624 -67116672 - ID_B1 SINE B4 -1 223 2 5 1344 298 245 37 9 chrX 99533624 99533731 -67116565 - MER33 DNA MER1_type -8 316 207 5 1344 670 194 28 21 chrX 99533726 99533868 -67116428 - B1F2 SINE Alu -5 144 2 6 1344 227 241 37 25 chrX 99534340 99534421 -67115875 - L2a LINE L2 -38 3388 3307 6 1344 513 0 0 0 chrX 99535592 99535649 -67114647 + (TC)n Simple_repeat Simple_repeat 2 58 0 6 1344 243 0 0 0 chrX 99535650 99535677 -67114619 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1344 263 265 193 20 chrX 99535729 99535879 -67114417 + L1MB7 LINE L1 5906 6081 -103 6 1344 477 283 75 0 chrX 99535929 99536049 -67114247 - B1F1 SINE Alu -15 134 6 6 1344 28 0 0 0 chrX 99536219 99536247 -67114049 + AT_rich Low_complexity Low_complexity 1 28 0 6 1344 219 269 14 56 chrX 99536960 99537031 -67113265 + MIRb SINE MIR 7 74 -194 6 1344 321 197 0 26 chrX 99538016 99538094 -67112202 - L1ME4a LINE L1 0 6124 6049 6 1344 586 233 0 58 chrX 99538247 99538384 -67111912 + B1_Mur1 SINE Alu 1 129 -20 6 1344 477 0 0 0 chrX 99538388 99538441 -67111855 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 7 1344 186 296 24 47 chrX 99538463 99538548 -67111748 - MIRb SINE MIR -62 206 124 7 1344 330 250 19 57 chrX 99538897 99539003 -67111293 + B3 SINE B2 1 102 -114 7 1344 384 238 20 56 chrX 99539686 99539798 -67110498 + PB1D9 SINE Alu 13 120 0 7 1344 189 0 0 0 chrX 99539838 99539859 -67110437 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 7 1344 425 326 73 11 chrX 99539884 99540061 -67110235 + MLT1B LTR MaLR 187 374 -16 7 1344 748 122 0 44 chrX 99540830 99540967 -67109329 + URR1B DNA MER1_type 83 213 -12 7 1344 1159 94 0 0 chrX 99540965 99541124 -67109172 - B2_Mm2 SINE B2 -36 159 1 7 1344 28 0 0 0 chrX 99541740 99541768 -67108528 + AT_rich Low_complexity Low_complexity 1 28 0 7 1344 239 178 0 0 chrX 99542263 99542308 -67107988 - L2a LINE L2 -6 3420 3376 7 1344 238 322 24 47 chrX 99542502 99542629 -67107667 + L2b LINE L2 3039 3162 -213 8 1344 328 281 12 0 chrX 99543784 99543866 -67106430 + ID2 SINE ID 1 83 0 8 1344 180 133 0 0 chrX 99545388 99545418 -67104878 - MIRc SINE MIR -26 242 213 8 1344 212 357 0 0 chrX 99547345 99547415 -67102881 + ID4 SINE ID 3 72 -11 8 1344 288 274 12 0 chrX 99547441 99547525 -67102771 - L1MA7 LINE L1 -24 6267 6183 8 1344 251 283 193 14 chrX 99547529 99547669 -67102627 + L1MA7 LINE L1 5991 6155 -136 8 1344 713 291 137 39 chrX 99547918 99548358 -67101938 - L1M5 LINE L1 -1356 4790 4312 8 1344 1360 303 108 20 chrX 99548358 99549065 -67101231 + L2 LINE L2 1932 2700 -719 8 1344 453 307 108 0 chrX 99549070 99549246 -67101050 - L1MB7 LINE L1 -1 6183 5989 8 1344 545 246 21 69 chrX 99549309 99549371 -67100925 - L1MB7 LINE L1 -354 5830 5781 8 1344 1461 66 16 0 chrX 99549371 99549554 -67100742 - B2_Mm2 SINE B2 -9 186 1 8 1344 545 246 21 69 chrX 99549554 99549679 -67100617 - L1MB7 LINE L1 -404 5780 5652 8 1344 180 0 0 0 chrX 99549692 99549712 -67100584 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 8 1344 219 36 0 0 chrX 99549921 99549949 -67100347 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 1344 343 278 41 10 chrX 99549959 99550057 -67100239 - Lx7 LINE L1 -390 7306 7206 9 1344 1131 260 63 4 chrX 99550115 99550385 -67099911 - Lx6 LINE L1 -170 7290 7005 9 1344 527 263 155 0 chrX 99550371 99550565 -67099731 - L1M4b LINE L1 -495 6543 6320 9 1344 351 0 0 0 chrX 99550782 99550821 -67099475 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 1344 236 242 45 15 chrX 99550950 99551017 -67099279 - L1M4b LINE L1 -3405 3601 3533 9 1344 1036 39 0 31 chrX 99551029 99551188 -67099108 + (TCCA)n Simple_repeat Simple_repeat 4 157 0 9 1344 341 228 48 6 chrX 99551332 99551436 -67098860 - PB1D10 SINE Alu -1 119 13 9 1344 401 244 0 0 chrX 99551456 99551534 -67098762 - ID4_ SINE ID -2 81 4 9 1344 354 204 119 29 chrX 99551540 99551652 -67098644 - B1F SINE Alu 0 117 11 9 1344 372 299 11 73 chrX 99551665 99551842 -67098454 - L1M4b LINE L1 -3727 3279 3114 9 1344 948 254 78 11 chrX 99551971 99552242 -67098054 - B4 SINE B4 -2 290 2 9 1344 1572 249 165 21 chrX 99552365 99553076 -67097220 - L1M4b LINE L1 -4205 3129 2317 9 1344 338 285 118 48 chrX 99553093 99553406 -67096890 - L1MA4A LINE L1 0 6300 5966 1 1344 34 0 0 0 chrX 99553409 99553443 -67096853 + AT_rich Low_complexity Low_complexity 1 34 0 1 1344 715 269 143 32 chrX 99553631 99554089 -67096207 - L1MA4A LINE L1 -375 5928 5426 1 1344 261 0 0 0 chrX 99554095 99554124 -67096172 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 1344 616 224 97 0 chrX 99554134 99554268 -67096028 - B3A SINE B2 -48 150 4 1 1344 2110 262 68 65 chrX 99554268 99555151 -67095145 - L1MA4A LINE L1 -855 5445 4555 1 1344 756 206 32 19 chrX 99555151 99555309 -67094987 - RSINE1 SINE B4 -2 163 4 1 1344 2110 267 73 77 chrX 99555309 99555672 -67094624 - L1MA4A LINE L1 -1589 4554 4201 1 1344 588 201 80 29 chrX 99555673 99555811 -67094485 - B1_Mus2 SINE Alu -2 145 1 1 1344 699 261 14 55 chrX 99555932 99556151 -67094145 - B3 SINE B2 -6 210 1 1 1344 946 247 167 6 chrX 99556186 99556670 -67093626 - L1M4b LINE L1 -5149 2185 1624 9 1344 213 292 65 43 chrX 99556675 99556768 -67093528 + PB1D10 SINE Alu 11 105 -12 1 1344 576 77 0 0 chrX 99556776 99556854 -67093442 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 1 1344 471 271 19 9 chrX 99556932 99557040 -67093256 - PB1D10 SINE Alu -5 112 4 1 1344 330 321 17 80 chrX 99557195 99557371 -67092925 - L1M4b LINE L1 -5953 1381 1217 9 1344 246 151 17 102 chrX 99557655 99557714 -67092582 - MER72B LTR ERV1 -682 86 33 1 1344 935 317 96 61 chrX 99557874 99558688 -67091608 - L1M4b LINE L1 -6397 937 96 9 1344 7484 58 1 2 chrX 99558770 99559745 -67090551 - L1Md_F2 LINE L1 -1 6581 5608 1 1344 25 31 0 0 chrX 99560211 99560243 -67090053 + AT_rich Low_complexity Low_complexity 1 32 0 1 1344 965 223 57 0 chrX 99560249 99560442 -67089854 - B3 SINE B2 -11 205 2 1 1344 264 321 97 35 chrX 99560791 99561017 -67089279 + L2 LINE L2 2748 2987 -432 1 1344 344 295 107 11 chrX 99561023 99561201 -67089095 - L1M5 LINE L1 -2465 3681 3487 1 1344 654 273 131 12 chrX 99561384 99561636 -67088660 - B4 SINE B4 -10 282 1 1 1344 363 268 179 0 chrX 99562299 99562411 -67087885 + B1F2 SINE Alu 11 142 -7 1 1344 507 243 31 62 chrX 99562427 99562449 -67087847 + ID_B1 SINE B4 66 222 -2 1 1344 834 167 21 14 chrX 99562449 99562589 -67087707 + B1_Mus1 SINE Alu 6 146 -2 1 1344 243 88 0 0 chrX 99562590 99562624 -67087672 + (GGA)n Simple_repeat Simple_repeat 3 36 0 1 1344 333 0 0 0 chrX 99562793 99562830 -67087466 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 1344 189 0 0 0 chrX 99562830 99562850 -67087446 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1344 275 227 30 15 chrX 99562879 99562946 -67087350 + ID4_ SINE ID 3 70 -13 1 1344 882 287 46 4 chrX 99562970 99563250 -67087046 + B4A SINE B4 1 292 0 1 1344 450 79 0 0 chrX 99563255 99563318 -67086978 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1344 625 279 0 35 chrX 99563505 99563646 -67086650 - RSINE1 SINE B4 -6 159 24 1 1344 444 280 60 8 chrX 99563710 99563843 -67086453 + B1F1 SINE Alu 1 140 -9 1 1344 476 235 105 56 chrX 99564428 99564590 -67085706 - ID_B1 SINE B4 0 224 55 1 1344 252 291 192 64 chrX 99564761 99564948 -67085348 - L2b LINE L2 -33 3342 3132 1 1344 223 240 0 20 chrX 99565156 99565207 -67085089 - L2a LINE L2 -1 3425 3376 1 1344 295 269 13 0 chrX 99565689 99565767 -67084529 + B3A SINE B2 1 79 -119 1 1344 391 286 9 0 chrX 99566161 99566266 -67084030 + B3A SINE B2 1 106 -92 1 1344 418 47 15 30 chrX 99566269 99566335 -67083961 + (CATA)n Simple_repeat Simple_repeat 4 68 0 1 1344 699 258 107 25 chrX 99567457 99567946 -67082350 - L1MD LINE L1 -1199 4947 4419 1 1344 343 324 54 34 chrX 99567947 99568094 -67082202 + ID_B1 SINE B4 71 220 -4 1 1344 498 240 74 8 chrX 99567963 99568099 -67082197 + B1F SINE Alu 6 149 0 1 1344 451 330 17 0 chrX 99568239 99568357 -67081939 - PB1 SINE Alu -7 120 1 1 1344 519 219 46 0 chrX 99568359 99568510 -67081786 - L1MD LINE L1 -1820 4326 4169 1 1344 1795 238 124 23 chrX 99568558 99569423 -67080873 - L1MD LINE L1 -2433 3713 2762 1 1344 964 289 40 24 chrX 99569487 99569937 -67080359 - L1MB4 LINE L1 -13 6403 5947 1 1344 510 181 0 0 chrX 99569987 99570081 -67080215 - B1_Mur2 SINE Alu -7 142 49 1 1344 498 294 154 26 chrX 99570080 99570314 -67079982 + ORR1E LTR MaLR 88 351 -8 1 1344 26 30 0 0 chrX 99570334 99570367 -67079929 + AT_rich Low_complexity Low_complexity 1 33 0 1 1344 227 303 11 0 chrX 99570388 99570477 -67079819 - L1MB4 LINE L1 -2745 3637 3548 1 1344 507 279 42 47 chrX 99570502 99570694 -67079602 - B3A SINE B2 -6 192 2 1 1344 658 166 29 0 chrX 99570724 99570863 -67079433 + CT-rich Low_complexity Low_complexity 2 144 0 1 1344 1099 50 0 0 chrX 99570864 99571005 -67079291 - L1_Mus1 LINE L1 0 6567 6427 1 1344 623 258 198 51 chrX 99571014 99571917 -67078379 - L1MB4 LINE L1 -2888 3494 2459 1 1344 658 222 20 20 chrX 99571922 99572069 -67078227 - B1_Mur2 SINE Alu 0 149 3 1 1344 471 254 249 17 chrX 99572096 99572457 -67077839 - L1MB4 LINE L1 -3951 2433 1989 1 1344 290 220 41 13 chrX 99572493 99572580 -67077716 + MTEa LTR MaLR 284 374 -5 1 1344 306 0 0 0 chrX 99572580 99572614 -67077682 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1344 394 271 105 30 chrX 99572812 99572945 -67077351 + MLT1A0 LTR MaLR 211 353 -12 1 1344 397 204 118 18 chrX 99572986 99573004 -67077292 - B1F SINE Alu -1 148 28 1 1344 478 196 54 0 chrX 99573004 99573096 -67077200 - ID_B1 SINE B4 -19 205 109 1 1344 667 280 77 37 chrX 99573095 99573418 -67076878 + Arthur1 DNA Tip100 3612 3947 0 1 1344 196 273 0 0 chrX 99573888 99573932 -67076364 + MIRm SINE MIR 216 259 -17 1 1344 413 145 0 13 chrX 99573940 99574017 -67076279 + CT-rich Low_complexity Low_complexity 1 76 0 1 1344 468 0 0 0 chrX 99574174 99574226 -67076070 + (TATG)n Simple_repeat Simple_repeat 3 54 0 1 1344 341 274 53 105 chrX 99574236 99574350 -67075946 - B1F1 SINE Alu -36 113 6 1 1344 235 208 0 111 chrX 99574311 99574365 -67075931 - B4A SINE B4 -163 129 82 1 1344 456 71 43 0 chrX 99574615 99574685 -67075611 - ORR1A2 LTR MaLR -254 73 1 1 1344 10787 122 74 12 chrX 99574686 99576533 -67073763 - ORR1A2-int LTR MaLR -1 1962 1 1 1344 2159 69 78 10 chrX 99576533 99576839 -67073457 - ORR1A2 LTR MaLR 0 327 1 1 1344 245 231 15 44 chrX 99577991 99578059 -67072237 - MIRb SINE MIR -28 240 175 1 1344 187 397 53 0 chrX 99578446 99578577 -67071719 + L2c LINE L2 2536 2673 -746 1 1344 225 273 117 0 chrX 99578863 99578940 -67071356 + MIRb SINE MIR 175 260 -8 1 1344 430 321 104 69 chrX 99578944 99579376 -67070920 + L2c LINE L2 2938 3384 -3 1 1344 361 322 80 89 chrX 99579553 99579655 -67070641 + L2 LINE L2 2722 2820 -599 1 1344 524 117 0 0 chrX 99579655 99579749 -67070547 + Lx9 LINE L1 7545 7638 -6 1 1344 361 322 80 89 chrX 99579749 99579973 -67070323 + L2 LINE L2 2821 3045 -374 1 1344 283 119 15 15 chrX 99580010 99580078 -67070218 + (TGG)n Simple_repeat Simple_repeat 1 68 0 1 1344 307 286 157 0 chrX 99580081 99580221 -67070075 - RSINE1 SINE B4 -2 163 2 1 1344 497 240 29 94 chrX 99580605 99580743 -67069553 + MER20 DNA MER1_type 1 129 -90 1 1344 293 276 200 16 chrX 99581514 99581659 -67068637 + MIRb SINE MIR 79 251 -11 1 1344 426 314 14 28 chrX 99581659 99581800 -67068496 + RSINE1 SINE B4 10 148 -17 1 1344 252 0 0 0 chrX 99581809 99581837 -67068459 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1344 189 0 0 0 chrX 99581837 99581857 -67068439 + (GA)n Simple_repeat Simple_repeat 2 22 0 1 1344 7177 45 34 2 chrX 99582114 99583300 -67066996 - L1Md_F2 LINE L1 -12 6570 5358 1 1344 373 292 40 89 chrX 99583436 99583560 -67066736 - B1F SINE Alu 0 149 32 1 1344 441 198 0 0 chrX 99583644 99583735 -67066561 + (TA)n Simple_repeat Simple_repeat 2 92 0 1 1344 251 259 180 4 chrX 99583827 99584060 -67066236 + L1MDa LINE L1 1198 1471 -5162 1 1344 743 149 88 15 chrX 99584139 99584275 -67066021 + B1_Mur4 SINE Alu 5 150 0 1 1344 353 287 90 0 chrX 99584302 99584446 -67065850 + L1MDa LINE L1 1727 1893 -4740 1 1344 357 216 111 20 chrX 99584452 99584551 -67065745 + L1MDa LINE L1 2431 2538 -4095 1 1344 261 0 0 0 chrX 99584551 99584580 -67065716 + (TAA)n Simple_repeat Simple_repeat 3 31 0 1 1344 710 193 89 0 chrX 99584683 99584818 -67065478 + B1_Mur3 SINE Alu 3 149 0 1 1344 496 294 23 31 chrX 99584916 99585046 -67065250 + RSINE1 SINE B4 4 132 -33 1 1344 266 261 21 11 chrX 99585746 99585839 -67064457 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 1 1344 1219 300 56 106 chrX 99585846 99586419 -67063877 - L1M2 LINE L1 -19 5828 5290 1 1344 801 278 86 8 chrX 99586419 99586687 -67063609 - B4A SINE B4 -2 290 2 1 1344 1350 293 11 53 chrX 99586687 99587334 -67062962 - L1M2 LINE L1 -822 5321 4713 1 1344 975 263 56 1 chrX 99587332 99587632 -67062664 - L1MD2 LINE L1 -459 5900 5587 1 1344 4202 262 95 107 chrX 99587658 99587694 -67062602 + Charlie1 DNA MER1_type 567 600 -2181 1 1344 933 190 14 23 chrX 99587694 99587910 -67062386 - L1MA5 LINE L1 -8 6292 6079 1 1344 4202 262 95 107 chrX 99587910 99588205 -67062091 + Charlie1 DNA MER1_type 601 925 -1856 1 1344 528 93 0 0 chrX 99588205 99588280 -67062016 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 1344 318 347 113 0 chrX 99588284 99588408 -67061888 - B1F SINE Alu -11 138 1 1 1344 4202 262 95 107 chrX 99588408 99590177 -67060119 + Charlie1 DNA MER1_type 926 2648 -133 1 1344 268 266 65 108 chrX 99590179 99590370 -67059926 + L1MEg LINE L1 1917 2110 -4290 1 1344 682 264 6 79 chrX 99590370 99590547 -67059749 + RSINE1 SINE B4 2 165 0 1 1344 268 266 65 108 chrX 99590547 99590662 -67059634 + L1MEg LINE L1 2111 2210 -4190 1 1344 539 243 6 141 chrX 99590832 99590995 -67059301 + B1_Mur3 SINE Alu 1 141 -8 1 1344 306 270 45 0 chrX 99591016 99591105 -67059191 + L1MEg LINE L1 2215 2307 -4108 1 1344 397 260 29 3 chrX 99591155 99591254 -67059042 - PB1D9 SINE Alu -22 105 2 1 1344 243 254 13 101 chrX 99591179 99591258 -67059038 - MT2B2 LTR ERVL -352 232 161 1 1344 238 352 14 0 chrX 99591195 99591266 -67059030 - ID_B1 SINE B4 -82 142 71 1 1344 516 288 14 21 chrX 99591394 99591536 -67058760 + ID_B1 SINE B4 84 224 0 1 1344 505 271 97 7 chrX 99591539 99591684 -67058612 + B4A SINE B4 1 158 -134 1 1344 717 23 0 0 chrX 99591761 99591848 -67058448 + (TAG)n Simple_repeat Simple_repeat 1 87 0 1 1344 727 305 88 39 chrX 99591959 99592552 -67057744 + L1MEg LINE L1 3791 4412 -1907 1 1344 23 33 0 0 chrX 99592806 99592836 -67057460 + AT_rich Low_complexity Low_complexity 1 30 0 1 1344 35 41 0 0 chrX 99592857 99592906 -67057390 + AT_rich Low_complexity Low_complexity 1 49 0 1 1344 22 0 0 0 chrX 99593851 99593873 -67056423 + AT_rich Low_complexity Low_complexity 1 22 0 1 1344 958 218 0 46 chrX 99594198 99594414 -67055882 - B3 SINE B2 -6 210 5 1 1344 470 220 114 44 chrX 99594615 99594729 -67055567 - B1F1 SINE Alu -16 133 12 1 1344 228 280 23 78 chrX 99594640 99594768 -67055528 + YREP_Mm Unknown Unknown 222 342 -1470 2 1344 262 296 31 108 chrX 99594812 99594941 -67055355 + L2c LINE L2 3268 3386 -1 2 1344 995 259 0 10 chrX 99595297 99595500 -67054796 - B3 SINE B2 -15 201 1 2 1344 512 256 41 0 chrX 99595504 99595625 -67054671 - B1F SINE Alu -1 148 23 2 1344 222 91 0 0 chrX 99595625 99595658 -67054638 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1344 762 24 95 0 chrX 99595658 99595868 -67054428 + (GA)n Simple_repeat Simple_repeat 1 229 0 2 1344 288 211 11 63 chrX 99596374 99596482 -67053814 - MIRb SINE MIR 0 262 162 2 1344 309 340 0 0 chrX 99598829 99598929 -67051367 - MER94 DNA AcHobo 0 134 35 2 1344 1023 206 15 5 chrX 99599745 99599950 -67050346 - B3 SINE B2 -9 207 1 2 1344 512 178 73 18 chrX 99599961 99600070 -67050226 - PB1D10 SINE Alu 0 117 3 2 1344 237 281 18 0 chrX 99600569 99600626 -67049670 - tRNA-Ala-GCY_ tRNA tRNA -8 67 10 2 1344 225 244 127 13 chrX 99601781 99601860 -67048436 - L2c LINE L2 -18 3369 3282 2 1344 278 336 105 83 chrX 99602481 99602757 -67047539 - L2c LINE L2 0 3387 3106 2 1344 1760 254 100 18 chrX 99602780 99603449 -67046847 + L1MD2 LINE L1 5459 6182 -177 2 1344 312 296 125 0 chrX 99603519 99603607 -67046689 + RSINE1 SINE B4 5 103 -62 2 1344 23 33 0 0 chrX 99603626 99603656 -67046640 + AT_rich Low_complexity Low_complexity 1 30 0 2 1344 21 0 0 0 chrX 99604475 99604496 -67045800 + AT_rich Low_complexity Low_complexity 1 21 0 2 1344 607 210 8 0 chrX 99604775 99604894 -67045402 - PB1D9 SINE Alu 0 120 1 2 1344 317 386 30 24 chrX 99605002 99605038 -67045258 + ID_B1 SINE B4 50 217 -7 2 1344 436 300 53 8 chrX 99605038 99605169 -67045127 + B1F1 SINE Alu 6 142 -7 2 1344 234 259 58 23 chrX 99605307 99605394 -67044902 - L2a LINE L2 -3 3423 3334 2 1344 1723 16 0 0 chrX 99605727 99605920 -67044376 - B2_Mm1t SINE B2 0 193 1 2 1344 384 221 35 0 chrX 99606196 99606282 -67044014 + PB1D10 SINE Alu 29 117 0 2 1344 516 237 42 21 chrX 99606333 99606475 -67043821 + B1F1 SINE Alu 5 149 0 2 1344 1043 232 57 15 chrX 99607050 99607313 -67042983 + B4 SINE B4 9 282 -10 2 1344 659 292 15 69 chrX 99607361 99607696 -67042600 - L1MB8 LINE L1 -26 6152 5836 2 1344 337 297 80 49 chrX 99607698 99607861 -67042435 + YREP_Mm Unknown Unknown 145 312 -1500 2 1344 667 252 22 22 chrX 99607728 99607866 -67042430 - ID_B1 SINE B4 -7 217 80 2 1344 619 250 90 24 chrX 99607866 99608027 -67042269 - L1MB8 LINE L1 -353 5825 5643 2 1344 222 37 0 0 chrX 99608027 99608054 -67042242 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1344 619 249 77 24 chrX 99608054 99608172 -67042124 - L1MB8 LINE L1 -542 5642 5515 2 1344 1082 98 0 7 chrX 99608173 99608317 -67041979 - B1_Mus1 SINE Alu -5 143 1 2 1344 661 158 156 15 chrX 99608359 99608564 -67041732 + Lx9 LINE L1 7410 7643 -1 2 1344 1174 260 121 14 chrX 99608567 99609078 -67041218 - L1MB8 LINE L1 -979 5167 4602 2 1344 474 306 101 15 chrX 99609671 99609909 -67040387 - MIR SINE MIR 0 268 12 2 1344 217 339 132 64 chrX 99610352 99610606 -67039690 + L2a LINE L2 3109 3426 0 2 1344 1267 143 45 18 chrX 99611360 99611580 -67038716 + URR1A DNA MER1_type 1 226 0 2 1344 272 310 16 66 chrX 99612668 99612789 -67037507 + MIR3 SINE MIR 2 116 -92 2 1344 402 292 163 17 chrX 99612881 99613102 -67037194 + MIRb SINE MIR 5 251 -17 2 1344 250 208 19 0 chrX 99613069 99613122 -67037174 + L2c LINE L2 3334 3387 0 2 1344 423 250 68 17 chrX 99613242 99613360 -67036936 + LFSINE_Vert SINE SINE 335 458 -1 2 1344 285 111 0 85 chrX 99614026 99614085 -67036211 - MamRep434 DNA TcMar -75 351 298 2 1344 1149 163 154 34 chrX 99614424 99614716 -67035580 + MamRep434 DNA TcMar 95 421 -5 2 1345 25 0 0 0 chrX 99614966 99614991 -67035305 + AT_rich Low_complexity Low_complexity 1 25 0 2 1345 567 225 7 14 chrX 99617348 99617492 -67032804 + Lx6 LINE L1 7285 7427 -33 2 1345 253 266 127 0 chrX 99617678 99617757 -67032539 + L2a LINE L2 3338 3426 0 2 1345 215 204 0 22 chrX 99617804 99617849 -67032447 + MIRb SINE MIR 199 242 -26 2 1345 292 275 8 155 chrX 99618347 99618381 -67031915 + MT2B LTR ERVL 138 152 -449 2 1345 609 197 0 5 chrX 99618381 99618493 -67031803 + B1_Mur4 SINE Alu 1 111 -9 2 1345 186 43 0 0 chrX 99618493 99618516 -67031780 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 2 1345 579 217 0 40 chrX 99618516 99618528 -67031768 + PB1D9 SINE Alu 112 120 0 2 1345 225 94 0 0 chrX 99618548 99618580 -67031716 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 2 1345 574 264 24 61 chrX 99618685 99618850 -67031446 + B3A SINE B2 40 198 0 2 1345 739 270 44 15 chrX 99619305 99619508 -67030788 - ID_B1 SINE B4 -14 210 2 2 1345 253 243 0 28 chrX 99620529 99620601 -67029695 + GA-rich Low_complexity Low_complexity 4 73 0 2 1345 207 0 0 0 chrX 99621144 99621167 -67029129 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2 1345 955 288 70 76 chrX 99621757 99622215 -67028081 + CR1_Mam LINE CR1 1508 1962 -242 2 1345 667 212 129 0 chrX 99623173 99623305 -67026991 + B1_Mur3 SINE Alu 1 149 0 2 1345 234 0 0 0 chrX 99624746 99624772 -67025524 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 1345 183 80 0 0 chrX 99624775 99624800 -67025496 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1345 234 324 166 27 chrX 99625559 99625746 -67024550 - L1M5 LINE L1 -552 5572 5360 2 1345 269 311 134 84 chrX 99626190 99626534 -67023762 - L2c LINE L2 -1 3386 3026 2 1345 1191 89 0 0 chrX 99626958 99627104 -67023192 + B1_Mus1 SINE Alu 3 148 0 2 1345 2354 36 0 11 chrX 99628183 99628461 -67021835 - L1Md_F3 LINE L1 -1 6583 6309 2 1345 191 36 36 0 chrX 99628505 99628533 -67021763 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1345 749 306 104 68 chrX 99628872 99629345 -67020951 - Tigger10 DNA Tigger -372 1471 982 2 1345 314 180 0 16 chrX 99629649 99629711 -67020585 + MER31-int LTR ERV1 1156 1216 -3720 2 1345 408 306 28 0 chrX 99629713 99629821 -67020475 + PB1D10 SINE Alu 5 115 -2 2 1345 265 288 15 0 chrX 99629821 99629887 -67020409 + ID4 SINE ID 2 68 -15 2 1345 4233 93 2 17 chrX 99629903 99630482 -67019814 - L1Md_F2 LINE L1 -117 6465 5896 2 1345 477 94 210 40 chrX 99630479 99630579 -67019717 + L1Md_F2 LINE L1 6463 6579 -3 2 1345 909 183 42 0 chrX 99630784 99630926 -67019370 + B1_Mur1 SINE Alu 2 149 0 2 1345 954 282 12 12 chrX 99631397 99631645 -67018651 - B4A SINE B4 -2 290 43 2 1345 616 237 4 172 chrX 99632475 99632730 -67017566 - Tigger7 DNA MER2_type -15 2476 2265 2 1345 887 183 7 0 chrX 99632793 99632935 -67017361 - B3 SINE B2 -73 143 1 2 1345 1713 172 222 12 chrX 99633019 99633365 -67016931 - MTD LTR MaLR 0 419 1 2 1345 347 263 5 226 chrX 99633787 99634008 -67016288 + MER31-int LTR ERV1 3116 3287 -1649 2 1345 465 213 0 0 chrX 99634103 99634178 -67016118 - ID4_ SINE ID -6 77 3 2 1345 799 179 56 21 chrX 99634465 99634608 -67015688 - B1F SINE Alu -1 148 1 2 1345 536 275 136 15 chrX 99634611 99634747 -67015549 - L1M4 LINE L1 -670 5498 5370 2 1345 306 0 0 0 chrX 99634747 99634781 -67015515 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1345 536 258 131 22 chrX 99634781 99634968 -67015328 - L1M4 LINE L1 -777 5369 5159 2 1345 585 269 6 101 chrX 99634978 99635156 -67015140 + RSINE1 SINE B4 5 165 0 2 1345 519 207 216 0 chrX 99635314 99635430 -67014866 - B1_Mur2 SINE Alu -2 147 7 2 1345 332 203 7 7 chrX 99635429 99635492 -67014804 - PB1D10 SINE Alu -39 88 26 2 1345 670 207 56 28 chrX 99635493 99635637 -67014659 + B1_Mur1 SINE Alu 1 148 -1 2 1345 399 330 44 57 chrX 99635924 99636152 -67014144 + MER92C LTR ERV1 1 225 -329 2 1345 231 246 33 0 chrX 99636164 99636225 -67014071 + MER92C LTR ERV1 484 546 -8 2 1345 492 86 0 0 chrX 99636325 99636395 -67013901 + (TC)n Simple_repeat Simple_repeat 2 71 0 2 1345 207 0 0 0 chrX 99636395 99636418 -67013878 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 1345 1009 129 36 0 chrX 99636551 99636691 -67013605 + B1_Mus2 SINE Alu 1 145 -2 2 1345 348 309 53 6 chrX 99636867 99637036 -67013260 - L1MC LINE L1 -2130 5752 5576 2 1345 774 255 49 15 chrX 99637286 99637489 -67012807 - MIR SINE MIR 0 262 53 2 1345 431 268 102 47 chrX 99637496 99637751 -67012545 - L1MA10 LINE L1 -7 6327 6059 2 1345 714 272 23 5 chrX 99637754 99637972 -67012324 + L1MA10 LINE L1 5757 5978 -211 2 1345 186 304 42 67 chrX 99639271 99639391 -67010905 + L2 LINE L2 1492 1608 -1811 2 1345 267 268 0 18 chrX 99639490 99639547 -67010749 - B4 SINE B4 -235 57 2 2 1345 638 211 39 0 chrX 99639604 99639732 -67010564 - RSINE1 SINE B4 -29 136 4 2 1345 250 213 31 47 chrX 99640349 99640413 -67009883 - MER46C DNA MER2_type -10 328 266 2 1345 218 345 34 45 chrX 99640494 99640506 -67009790 - ID_B1 SINE B4 -131 93 7 2 1345 267 315 26 40 chrX 99640506 99640582 -67009714 - ID4_ SINE ID -2 81 7 2 1345 576 42 0 0 chrX 99641090 99641161 -67009135 + (CA)n Simple_repeat Simple_repeat 2 72 0 2 1345 501 287 22 0 chrX 99642706 99642842 -67007454 + B1F2 SINE Alu 4 142 -7 2 1345 910 263 99 46 chrX 99643175 99643438 -67006858 + B4A SINE B4 2 278 -14 2 1345 831 259 55 10 chrX 99643798 99644106 -67006190 - L1MA9 LINE L1 -55 6257 5928 2 1345 320 210 139 53 chrX 99644173 99644324 -67005972 - L1MA9 LINE L1 -355 5936 5773 2 1345 2999 34 51 3 chrX 99644648 99644999 -67005297 + L1Md_F3 LINE L1 6217 6584 0 2 1345 255 329 181 0 chrX 99645826 99645975 -67004321 + L2 LINE L2 2833 3008 -411 2 1345 997 229 51 20 chrX 99646023 99646317 -67003979 - L1M4 LINE L1 -579 5595 5293 2 1345 319 281 70 40 chrX 99646325 99646425 -67003871 - PB1D10 SINE Alu -7 110 8 2 1345 306 321 11 67 chrX 99646514 99646604 -67003692 - ID_B1 SINE B4 -114 110 26 3 1345 1646 75 0 23 chrX 99646719 99646936 -67003360 - L1_Mus2 LINE L1 -1 6565 6354 3 1345 23202 105 31 6 chrX 99646942 99650855 -66999441 - L1Md_F LINE L1 -1147 4736 725 3 1345 507 233 27 75 chrX 99650872 99650983 -66999313 - L1Md_F LINE L1 -5831 785 676 3 1345 1245 50 0 0 chrX 99650983 99651122 -66999174 + B1_Mm SINE Alu 3 141 -6 3 1345 507 233 27 75 chrX 99651122 99651196 -66999100 - L1Md_F LINE L1 -5941 675 609 3 1345 454 212 29 156 chrX 99651237 99651410 -66998886 - L1VL1 LINE L1 -6065 357 207 3 1345 1762 28 4 44 chrX 99651427 99651653 -66998643 - L1Md_F2 LINE L1 0 6582 6366 3 1345 535 267 52 30 chrX 99651812 99651947 -66998349 + ID_B1 SINE B4 84 221 -3 3 1345 566 325 51 0 chrX 99651972 99652246 -66998050 - L1ME1 LINE L1 -23 6161 5874 3 1345 342 204 84 90 chrX 99652272 99652300 -66997996 - L1MC2 LINE L1 -25 7760 7739 3 1345 450 0 0 0 chrX 99652300 99652350 -66997946 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1345 1529 237 61 48 chrX 99652350 99652855 -66997441 - L1MC2 LINE L1 -118 6226 5775 3 1345 329 343 9 29 chrX 99652857 99652880 -66997416 - B4A SINE B4 -104 188 86 3 1345 427 268 0 0 chrX 99652880 99652962 -66997334 - B1F2 SINE Alu -67 82 1 3 1345 1079 234 10 10 chrX 99652971 99653178 -66997118 - B3 SINE B2 -7 209 3 3 1345 316 198 74 0 chrX 99653181 99653262 -66997034 - L1MC2 LINE L1 -623 5721 5635 3 1345 911 297 38 30 chrX 99653285 99653684 -66996612 - L1ME1 LINE L1 -318 5861 5460 3 1345 547 274 60 10 chrX 99653694 99653893 -66996403 - L1MD LINE L1 -917 5229 5021 3 1345 550 236 8 24 chrX 99653904 99654030 -66996266 + B1_Mur1 SINE Alu 26 149 0 3 1345 668 243 136 0 chrX 99654525 99654665 -66995631 + B3 SINE B2 2 160 -56 3 1345 932 285 35 32 chrX 99654794 99655200 -66995096 - L1MC4 LINE L1 -539 7503 7097 3 1345 573 314 32 11 chrX 99655259 99655449 -66994847 + L1MC4 LINE L1 6660 6853 -1189 3 1345 565 232 10 0 chrX 99656134 99656233 -66994063 + RSINE1 SINE B4 3 102 -63 3 1345 380 272 143 8 chrX 99656358 99656484 -66993812 - ID_B1 SINE B4 -9 215 73 3 1345 180 0 0 0 chrX 99656563 99656583 -66993713 + (TTCC)n Simple_repeat Simple_repeat 1 20 0 3 1345 234 318 45 0 chrX 99656800 99656866 -66993430 + MER63B DNA AcHobo 337 405 -31 3 1345 312 352 82 24 chrX 99657749 99657943 -66992353 - MIRb SINE MIR -14 254 38 3 1345 869 176 35 0 chrX 99658041 99658183 -66992113 - B1_Mus2 SINE Alu 0 147 1 3 1345 342 329 167 25 chrX 99658803 99659121 -66991175 + L2c LINE L2 2983 3345 -42 3 1345 463 286 103 106 chrX 99659953 99660301 -66989995 + ORR1E LTR MaLR 3 349 -10 3 1345 9083 14 0 0 chrX 99660405 99662011 -66988285 - L1Md_T LINE L1 0 6582 4978 3 1345 7163 27 0 0 chrX 99662003 99662827 -66987469 + L1Md_T LINE L1 4157 4980 -903 3 1345 300 395 18 18 chrX 99662954 99663181 -66987115 + L2 LINE L2 2732 2958 -461 3 1345 297 292 78 11 chrX 99664269 99664359 -66985937 - ID_B1 SINE B4 -127 97 2 3 1345 966 256 162 33 chrX 99664360 99664780 -66985516 + MLT1D LTR MaLR 30 503 -2 3 1345 423 0 0 0 chrX 99665086 99665133 -66985163 + (GA)n Simple_repeat Simple_repeat 1 47 0 3 1345 28 0 0 0 chrX 99666146 99666174 -66984122 + AT_rich Low_complexity Low_complexity 1 28 0 3 1345 450 242 29 29 chrX 99666194 99666296 -66984000 + PB1D10 SINE Alu 1 102 -15 3 1345 1129 228 5 5 chrX 99666366 99666582 -66983714 + B3 SINE B2 1 216 0 3 1345 253 233 0 0 chrX 99666993 99667053 -66983243 - B1F1 SINE Alu -89 60 1 3 1345 318 230 40 0 chrX 99667138 99667212 -66983084 - L1M4 LINE L1 -1445 4701 4625 3 1345 1776 255 77 20 chrX 99667228 99667825 -66982471 + L1M4 LINE L1 3532 4162 -1984 3 1345 413 252 46 61 chrX 99667827 99667958 -66982338 + RSINE1 SINE B4 1 129 -36 3 1345 232 154 167 0 chrX 99669373 99669451 -66980845 - Lx7 LINE L1 -18 7678 7588 3 1345 378 0 0 0 chrX 99669694 99669736 -66980560 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1345 594 311 42 5 chrX 99669736 99669949 -66980347 - Lx7 LINE L1 -388 7308 7088 3 1345 883 84 17 0 chrX 99669950 99670069 -66980227 + B1_Mur2 SINE Alu 18 138 -11 3 1345 357 219 65 131 chrX 99670069 99670118 -66980178 + MT2B LTR ERVL 182 338 -263 3 1345 1025 108 6 0 chrX 99670161 99670328 -66979968 + (CA)n Simple_repeat Simple_repeat 1 168 0 3 1345 238 389 17 77 chrX 99671322 99671503 -66978793 - MamSINE1 SINE tRNA -119 171 2 3 1345 499 58 14 0 chrX 99671971 99672040 -66978256 - URR1B DNA MER1_type -9 216 147 3 1345 935 185 80 80 chrX 99672198 99672410 -66977886 + B3 SINE B2 1 212 -4 3 1345 895 247 44 24 chrX 99673275 99673569 -66976727 + L1MC3 LINE L1 7420 7719 -66 3 1345 238 245 0 0 chrX 99674588 99674637 -66975659 + C-rich Low_complexity Low_complexity 1 49 0 3 1345 229 354 0 35 chrX 99674874 99674959 -66975337 - L2a LINE L2 0 3426 3345 3 1345 561 288 116 79 chrX 99674957 99675519 -66974777 - L2a LINE L2 -267 3159 2526 3 1345 778 284 0 23 chrX 99675601 99675817 -66974479 - MTE2a-int LTR MaLR -1364 216 6 3 1345 1463 220 46 84 chrX 99675817 99676209 -66974087 - MTE2a LTR MaLR -2 377 1 3 1345 835 279 57 25 chrX 99676242 99676521 -66973775 - B4A SINE B4 -2 290 3 3 1345 439 263 8 25 chrX 99676655 99676776 -66973520 - PB1D9 SINE Alu -1 119 1 3 1345 362 272 200 38 chrX 99677539 99677749 -66972547 - MIR SINE MIR -11 251 8 3 1345 477 0 0 0 chrX 99677782 99677835 -66972461 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1345 1817 184 108 12 chrX 99678860 99679201 -66971095 - ORR1D1 LTR MaLR 0 374 1 3 1345 267 31 0 0 chrX 99679414 99679446 -66970850 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1345 297 259 46 17 chrX 99680312 99680427 -66969869 - MIR SINE MIR -32 236 114 3 1345 350 159 125 34 chrX 99681666 99681759 -66968537 - PB1D10 SINE Alu -43 105 10 3 1345 778 300 12 46 chrX 99682058 99682299 -66967997 - MER106A DNA MER1_type -3 233 1 3 1345 301 211 53 0 chrX 99682443 99682500 -66967796 - HAL1-3A_ME LINE L1 -824 2034 1975 3 1345 492 268 51 25 chrX 99682752 99682909 -66967387 + MER5A1 DNA MER1_type 2 162 -4 3 1345 433 309 87 7 chrX 99683310 99683460 -66966836 + Charlie4z DNA MER1_type 6 167 0 3 1345 230 307 48 0 chrX 99683648 99683723 -66966573 - MIR SINE MIR -174 94 16 3 1345 586 197 14 0 chrX 99683841 99683983 -66966313 + (TA)n Simple_repeat Simple_repeat 1 144 0 3 1345 908 233 21 16 chrX 99684796 99684988 -66965308 - B3A SINE B2 -4 194 2 3 1345 398 333 9 0 chrX 99684998 99685103 -66965193 - PB1D10 SINE Alu -6 111 6 3 1345 930 132 96 0 chrX 99685892 99686028 -66964268 - B1_Mur2 SINE Alu 0 149 1 3 1345 216 0 0 0 chrX 99686498 99686522 -66963774 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 3 1345 388 268 61 26 chrX 99686531 99686646 -66963650 + PB1D9 SINE Alu 1 119 -1 3 1345 1024 152 208 0 chrX 99686777 99686955 -66963341 + B3 SINE B2 2 216 0 3 1345 257 246 0 68 chrX 99687014 99687088 -66963208 + ID4_ SINE ID 2 70 -13 3 1345 180 0 0 0 chrX 99687305 99687325 -66962971 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 1345 391 186 177 26 chrX 99687327 99687430 -66962866 - B1_Mur4 SINE Alu -3 114 2 3 1345 1394 73 45 6 chrX 99687486 99687664 -66962632 - B2_Mm2 SINE B2 -10 185 1 3 1345 531 219 47 9 chrX 99688184 99688290 -66962006 + PB1D7 SINE Alu 3 112 -8 3 1345 724 286 64 26 chrX 99688480 99688713 -66961583 - B4A SINE B4 -50 242 1 3 1345 267 284 68 10 chrX 99688713 99688813 -66961483 + MER31A LTR ERV1 268 373 -112 3 1345 458 214 0 0 chrX 99689152 99689222 -66961074 + ID4 SINE ID 4 73 -10 3 1345 667 264 63 0 chrX 99689231 99689405 -66960891 + ID_B1 SINE B4 1 185 -39 3 1345 212 0 0 35 chrX 99689406 99689435 -66960861 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 3 1345 378 0 0 0 chrX 99689746 99689788 -66960508 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1345 225 65 0 0 chrX 99691190 99691221 -66959075 + (CAAT)n Simple_repeat Simple_repeat 3 33 0 3 1345 564 265 17 0 chrX 99691460 99691577 -66958719 - PB1D9 SINE Alu 0 120 2 3 1345 1146 88 6 6 chrX 99692813 99692974 -66957322 + B2_Mm2 SINE B2 2 162 -33 3 1345 224 280 208 17 chrX 99693153 99693273 -66957023 - MIRc SINE MIR -115 153 11 3 1345 468 0 0 0 chrX 99693321 99693373 -66956923 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 1345 571 185 101 9 chrX 99694000 99694109 -66956187 + PB1D9 SINE Alu 2 120 0 3 1345 207 266 0 0 chrX 99694177 99694241 -66956055 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 3 1345 335 247 55 0 chrX 99694379 99694452 -66955844 + ID4_ SINE ID 1 77 -6 3 1345 351 0 0 0 chrX 99694463 99694502 -66955794 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1345 1218 175 19 5 chrX 99694533 99694745 -66955551 + B3 SINE B2 2 216 0 3 1345 229 265 0 0 chrX 99694769 99694818 -66955478 + B4A SINE B4 3 51 -241 3 1345 689 309 6 44 chrX 99694840 99695023 -66955273 + B4A SINE B4 116 291 -1 3 1345 209 108 0 26 chrX 99695035 99695073 -66955223 + (CATA)n Simple_repeat Simple_repeat 4 40 0 3 1345 685 219 80 0 chrX 99695609 99695746 -66954550 + RSINE1 SINE B4 1 148 -17 3 1345 198 0 0 0 chrX 99695753 99695775 -66954521 + (TAGA)n Simple_repeat Simple_repeat 1 22 0 3 1345 917 210 13 113 chrX 99695804 99696035 -66954261 + B3 SINE B2 1 208 -8 3 1345 252 298 106 0 chrX 99696223 99696327 -66953969 + MIRb SINE MIR 7 121 -147 3 1345 294 36 53 18 chrX 99696333 99696390 -66953906 - B2_Mm2 SINE B2 0 195 137 3 1345 261 0 0 0 chrX 99696451 99696480 -66953816 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 4 1345 1131 130 0 0 chrX 99696480 99696641 -66953655 - B2_Mm2 SINE B2 -34 161 1 3 1345 193 293 0 0 chrX 99696644 99696685 -66953611 + MIRm SINE MIR 111 151 -125 4 1345 343 324 67 76 chrX 99696779 99696912 -66953384 + ID_B1 SINE B4 2 219 -1 4 1345 395 195 69 0 chrX 99696912 99696999 -66953297 + B1F SINE Alu 52 144 -5 4 1345 587 312 64 67 chrX 99697063 99697345 -66952951 - B4A SINE B4 -7 285 5 4 1345 638 164 49 37 chrX 99698147 99698285 -66952011 + B1_Mur4 SINE Alu 1 140 -10 4 1345 207 0 0 0 chrX 99698319 99698342 -66951954 + (TTTTG)n Simple_repeat Simple_repeat 4 26 0 4 1345 1034 92 27 34 chrX 99698344 99698491 -66951805 - B1_Mus2 SINE Alu 0 147 2 4 1345 222 317 16 16 chrX 99698648 99698709 -66951587 - ID4 SINE ID -22 61 1 4 1345 462 255 9 9 chrX 99698722 99698829 -66951467 - PB1D10 SINE Alu -8 109 3 4 1345 677 221 21 14 chrX 99698916 99699058 -66951238 + B1_Mur1 SINE Alu 5 147 -2 4 1345 180 0 0 0 chrX 99699607 99699627 -66950669 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1345 310 301 144 22 chrX 99701475 99701655 -66948641 - MIRb SINE MIR -47 221 20 4 1345 360 64 0 0 chrX 99701749 99701796 -66948500 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1345 234 0 0 0 chrX 99701796 99701821 -66948475 + (GA)n Simple_repeat Simple_repeat 1 26 0 4 1345 792 241 0 24 chrX 99702259 99702425 -66947871 + RSINE1 SINE B4 4 165 0 4 1345 443 224 174 53 chrX 99702462 99702594 -66947702 + B1F2 SINE Alu 1 148 -1 4 1345 561 178 15 37 chrX 99703161 99703295 -66947001 + RMER4B LTR ERVK 17 147 -438 4 1345 552 15 0 0 chrX 99703298 99703363 -66946933 + (CA)n Simple_repeat Simple_repeat 1 65 0 4 1345 237 256 145 47 chrX 99703470 99703642 -66946654 + L2 LINE L2 2447 2635 -784 4 1345 1280 255 55 9 chrX 99703762 99704186 -66946110 + RMER12 LTR ERVK 1 452 -1396 4 1345 257 259 25 92 chrX 99704166 99704285 -66946011 + RMER12 LTR ERVK 1131 1241 -607 4 1345 560 217 32 83 chrX 99704279 99704435 -66945861 + RLTR22_Mur LTR ERVK 1150 1297 -551 4 1345 225 268 0 51 chrX 99704437 99704496 -66945800 + RMER12B LTR ERVK 1164 1219 -185 4 1345 1066 244 60 35 chrX 99704572 99704600 -66945696 - B4 SINE B4 0 292 265 4 1345 2643 169 143 19 chrX 99704600 99705112 -66945184 + RMER15 LTR ERVL 1 575 0 4 1345 1066 244 60 35 chrX 99705112 99705367 -66944929 - B4 SINE B4 -28 264 2 4 1345 7133 117 19 7 chrX 99705374 99706420 -66943876 - Lx LINE L1 -2 6652 5594 4 1345 1323 143 78 12 chrX 99706420 99706675 -66943621 + RMER16 LTR ERVK 262 533 0 4 1345 433 354 16 22 chrX 99707026 99707211 -66943085 + MIR SINE MIR 8 191 -71 4 1345 266 222 19 0 chrX 99707550 99707604 -66942692 + B4A SINE B4 1 55 -237 4 1345 306 302 30 63 chrX 99708618 99708768 -66941528 + B4 SINE B4 71 212 -80 4 1345 988 148 7 0 chrX 99708830 99708979 -66941317 - B1_Mur4 SINE Alu 0 150 1 4 1345 493 224 76 17 chrX 99710022 99710140 -66940156 - B1F SINE Alu -7 142 18 4 1345 22 99 0 0 chrX 99711748 99711819 -66938477 + AT_rich Low_complexity Low_complexity 1 71 0 4 1345 226 321 35 12 chrX 99712016 99712101 -66938195 - PB1D7 SINE Alu -22 98 12 4 1345 357 323 8 8 chrX 99712441 99712566 -66937730 + L1M5 LINE L1 5547 5671 -453 4 1345 229 216 0 19 chrX 99712575 99712627 -66937669 - B4A SINE B4 -241 51 1 4 1345 305 292 112 42 chrX 99712926 99713069 -66937227 + RSINE1 SINE B4 4 156 -9 4 1345 186 43 0 0 chrX 99713085 99713108 -66937188 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1345 661 143 54 31 chrX 99713223 99713353 -66936943 + RMER20B LTR ERVK 1 133 -494 4 1345 253 316 52 21 chrX 99713398 99713495 -66936801 + RMER20B LTR ERVK 525 624 -3 4 1345 299 299 122 20 chrX 99713520 99713667 -66936629 + L2a LINE L2 3249 3410 -16 4 1345 349 319 50 21 chrX 99713671 99713812 -66936484 - B1F SINE Alu -2 147 3 4 1345 398 205 22 109 chrX 99714187 99714324 -66935972 - RSINE1 SINE B4 -2 163 39 4 1345 515 231 28 9 chrX 99714897 99715006 -66935290 + PB1D10 SINE Alu 2 112 -5 4 1345 685 241 75 80 chrX 99715014 99715055 -66935241 + B3 SINE B2 2 37 -179 4 1345 2148 138 6 41 chrX 99715055 99715394 -66934902 + ORR1A2 LTR MaLR 1 327 0 4 1345 685 241 75 80 chrX 99715394 99715564 -66934732 + B3 SINE B2 38 212 -4 4 1345 597 206 49 23 chrX 99716481 99716644 -66933652 + Lx4B LINE L1 6888 7053 -5 4 1345 647 141 210 0 chrX 99716660 99716893 -66933403 - Lx9 LINE L1 -1 7643 7362 4 1345 406 191 51 0 chrX 99717051 99717161 -66933135 - ORR1D1 LTR MaLR -7 367 200 4 1345 922 164 0 0 chrX 99717281 99717415 -66932881 + B1_Mur2 SINE Alu 3 136 -13 4 1345 1366 240 117 42 chrX 99717450 99717980 -66932316 + L1M4 LINE L1 4415 4984 -1162 4 1345 229 325 0 0 chrX 99718006 99718123 -66932173 + A-rich Low_complexity Low_complexity 1 117 0 4 1345 247 197 203 40 chrX 99718161 99718235 -66932061 - Lx7 LINE L1 -358 7338 7253 4 1345 1314 282 105 45 chrX 99718237 99718753 -66931543 + MER68 LTR ERVL 6 552 -11 4 1345 479 223 260 29 chrX 99718771 99719044 -66931252 + L1M4 LINE L1 4999 5334 -812 4 1345 300 175 53 0 chrX 99719042 99719099 -66931197 + L1_Mm LINE L1 5381 5440 -443 4 1345 369 255 101 7 chrX 99719443 99719581 -66930715 + L1M4 LINE L1 5455 5605 -579 4 1345 5025 138 9 4 chrX 99719602 99719807 -66930489 + L1_Mus4 LINE L1 5097 5305 -581 4 1345 1444 91 0 21 chrX 99719807 99719998 -66930298 + B2_Mm2 SINE B2 2 188 -7 4 1345 7976 89 7 2 chrX 99719998 99721308 -66928988 + L1_Mus4 LINE L1 5306 6618 -18 4 1345 333 68 0 0 chrX 99721308 99721352 -66928944 + (TAG)n Simple_repeat Simple_repeat 1 44 0 4 1345 229 285 22 37 chrX 99721373 99721508 -66928788 + Lx8 LINE L1 7341 7473 0 4 1345 1037 181 48 24 chrX 99721527 99721736 -66928560 + MTEa LTR MaLR 166 379 0 4 1345 1534 206 75 35 chrX 99721777 99722124 -66928172 + MTC LTR MaLR 40 400 -21 4 1345 242 312 179 14 chrX 99722805 99722945 -66927351 - MER5A DNA MER1_type -1 188 26 4 1345 589 202 84 28 chrX 99723132 99723306 -66926990 - B3A SINE B2 -17 178 1 4 1345 1278 13 0 0 chrX 99723904 99724055 -66926241 + L1Md_T LINE L1 5436 5586 -297 4 1345 8122 52 0 0 chrX 99724055 99725051 -66925245 + L1Md_T LINE L1 5587 6582 0 4 1345 714 223 7 7 chrX 99725104 99725253 -66925043 + B1_Mur2 SINE Alu 1 149 0 4 1345 1143 185 19 9 chrX 99725453 99725666 -66924630 - B3 SINE B2 0 216 2 4 1345 937 262 5 0 chrX 99726514 99726720 -66923576 - B3 SINE B2 -9 207 1 4 1345 1040 211 19 19 chrX 99726765 99726978 -66923318 - B3 SINE B2 0 216 4 4 1345 394 309 14 28 chrX 99727546 99727689 -66922607 - ID_B1 SINE B4 -2 222 82 4 1345 403 220 193 0 chrX 99727968 99728077 -66922219 + MER5A1 DNA MER1_type 1 130 -36 4 1345 303 93 0 0 chrX 99728106 99728149 -66922147 + (ATG)n Simple_repeat Simple_repeat 1 43 0 4 1345 603 161 96 44 chrX 99728149 99728285 -66922011 - B1_Mur4 SINE Alu -7 143 1 4 1345 658 287 0 62 chrX 99728294 99728502 -66921794 - B3A SINE B2 -3 195 1 4 1345 4227 126 19 24 chrX 99728830 99729053 -66921243 + Lx LINE L1 5149 5359 -524 4 1345 2217 80 81 23 chrX 99729053 99729398 -66920898 + Lx LINE L1 6289 6653 -1 4 1345 7171 105 15 6 chrX 99729398 99730671 -66919625 + Lx LINE L1 5360 6654 0 4 1345 620 268 0 0 chrX 99731357 99731484 -66918812 + RSINE1 SINE B4 3 129 -36 4 1345 410 286 81 18 chrX 99731576 99731754 -66918542 - B4 SINE B4 -11 281 78 4 1345 1644 201 89 30 chrX 99731810 99732204 -66918092 + MTD LTR MaLR 3 419 0 4 1345 349 308 9 19 chrX 99732693 99732799 -66917497 - PB1D10 SINE Alu -10 107 3 4 1345 247 103 30 134 chrX 99732971 99733038 -66917258 + RLTR9A LTR ERVK 1 60 -308 4 1345 535 287 11 66 chrX 99733118 99733301 -66916995 + RLTR9B LTR ERVK 265 437 0 4 1345 27 0 0 0 chrX 99733698 99733725 -66916571 + AT_rich Low_complexity Low_complexity 1 27 0 4 1345 1735 188 64 37 chrX 99733983 99734391 -66915905 + MTD LTR MaLR 1 419 0 4 1345 249 357 0 12 chrX 99734481 99734566 -66915730 + MIRb SINE MIR 38 121 -147 4 1345 477 34 0 0 chrX 99734627 99734686 -66915610 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 4 1345 226 323 29 43 chrX 99734693 99734832 -66915464 + MIR SINE MIR 120 256 -6 4 1345 342 330 58 0 chrX 99734917 99735020 -66915276 + PB1D10 SINE Alu 3 111 -6 4 1345 1023 234 15 0 chrX 99735037 99735242 -66915054 - B3 SINE B2 -8 208 1 4 1345 585 229 185 39 chrX 99735270 99735457 -66914839 + B3A SINE B2 1 216 0 4 1345 603 164 171 8 chrX 99735663 99735786 -66914510 - B1_Mur2 SINE Alu -6 143 1 4 1345 251 346 0 0 chrX 99735842 99735920 -66914376 - RMER30 DNA MER1_type -111 91 14 4 1345 1450 69 16 0 chrX 99737115 99737304 -66912992 - B2_Mm2 SINE B2 -3 192 1 4 1345 360 345 0 0 chrX 99737456 99737566 -66912730 - PB1D10 SINE Alu -5 112 3 4 1345 593 199 49 117 chrX 99737605 99737810 -66912486 - B3A SINE B2 -5 193 3 4 1345 1055 236 95 95 chrX 99737924 99738294 -66912002 + MLT1B LTR MaLR 3 372 -18 4 1345 300 312 26 18 chrX 99738507 99738621 -66911675 + PB1D10 SINE Alu 1 115 -2 4 1345 1916 130 34 45 chrX 99739001 99739435 -66910861 + RMER17C LTR ERVK 9 439 -519 4 1345 1368 47 0 6 chrX 99739628 99739800 -66910496 + B2_Mm2 SINE B2 1 171 -24 4 1345 347 247 14 0 chrX 99740508 99740581 -66909715 - ID4_ SINE ID -6 77 4 4 1345 1170 37 0 0 chrX 99740946 99741082 -66909214 + B1_Mm SINE Alu 1 136 -11 4 1345 198 0 0 0 chrX 99741145 99741167 -66909129 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1345 29 0 0 0 chrX 99741712 99741741 -66908555 + AT_rich Low_complexity Low_complexity 1 29 0 4 1345 563 266 83 31 chrX 99741862 99742091 -66908205 + L1MB7 LINE L1 5609 5849 -335 5 1345 269 292 59 50 chrX 99742091 99742111 -66908185 - PB1D10 SINE Alu -12 105 4 5 1345 336 253 49 25 chrX 99742111 99742192 -66908104 - ID_B1 SINE B4 -57 167 85 5 1345 272 265 61 10 chrX 99742290 99742389 -66907907 + L1MC4 LINE L1 5690 5793 -2089 5 1345 7922 27 8 1 chrX 99742489 99743529 -66906767 - L1Md_F2 LINE L1 -12 6570 5524 5 1345 754 148 62 8 chrX 99743530 99743659 -66906637 + B1_Mur3 SINE Alu 12 147 -2 5 1345 557 192 8 0 chrX 99743663 99743788 -66906508 + GA-rich Low_complexity Low_complexity 3 128 0 5 1345 725 209 7 26 chrX 99743888 99744040 -66906256 + B1_Mur1 SINE Alu 1 149 0 5 1345 277 256 48 12 chrX 99744259 99744342 -66905954 + MLT1G1 LTR MaLR 6 91 -488 5 1345 1940 218 76 8 chrX 99744363 99744743 -66905553 - MTD LTR MaLR 0 419 14 5 1345 308 265 100 73 chrX 99745399 99745509 -66904787 + MLT1G1 LTR MaLR 164 276 -303 5 1345 289 272 79 104 chrX 99745618 99745782 -66904514 + MLT1G1 LTR MaLR 389 548 0 5 1346 861 256 9 38 chrX 99746028 99746239 -66904057 + B3 SINE B2 5 209 -7 5 1346 358 267 152 76 chrX 99746321 99746690 -66903606 + L1MC4 LINE L1 7206 7602 -440 5 1346 327 265 19 19 chrX 99746835 99746939 -66903357 + GA-rich Low_complexity Low_complexity 2 105 0 5 1346 258 250 22 22 chrX 99746978 99747068 -66903228 + L1MC4 LINE L1 7950 8039 -3 5 1346 261 276 159 45 chrX 99747238 99747458 -66902838 - LTR55 LTR ERV -169 379 135 5 1346 510 289 0 0 chrX 99747476 99747590 -66902706 - PB1D10 SINE Alu -3 114 1 5 1346 224 333 26 0 chrX 99747770 99747848 -66902448 + ID2 SINE ID 2 81 -2 5 1346 228 364 25 25 chrX 99747947 99748026 -66902270 + MIR3 SINE MIR 78 156 -52 5 1346 249 226 0 31 chrX 99748045 99748109 -66902187 - BC1_Mm scRNA scRNA -53 99 38 5 1346 198 299 131 23 chrX 99748155 99748285 -66902011 - L2c LINE L2 -1 3386 3243 5 1346 207 162 0 0 chrX 99748545 99748582 -66901714 + GA-rich Low_complexity Low_complexity 2 38 0 5 1346 180 354 53 30 chrX 99748648 99748779 -66901517 - L2c LINE L2 -459 2960 2827 5 1346 861 304 89 2 chrX 99748820 99749268 -66901028 - L1MDa LINE L1 -5290 1343 857 5 1346 948 177 121 6 chrX 99749873 99750055 -66900241 + B3 SINE B2 9 211 -5 5 1346 448 282 45 8 chrX 99750480 99750612 -66899684 + B1F2 SINE Alu 3 139 -10 5 1346 24 0 0 0 chrX 99751116 99751140 -66899156 + AT_rich Low_complexity Low_complexity 1 24 0 5 1346 237 338 38 0 chrX 99752257 99752337 -66897959 - L2a LINE L2 0 3426 3344 5 1346 248 266 78 0 chrX 99753169 99753233 -66897063 - L2a LINE L2 0 3426 3358 5 1346 201 322 103 40 chrX 99753171 99753297 -66896999 - MIRm SINE MIR 0 276 143 5 1346 734 251 98 0 chrX 99753297 99753480 -66896816 - RMER30 DNA MER1_type -1 201 1 5 1346 1184 68 0 0 chrX 99754346 99754492 -66895804 - B1_Mus2 SINE Alu 0 147 2 5 1346 204 225 0 0 chrX 99754523 99754563 -66895733 + (TATG)n Simple_repeat Simple_repeat 1 40 0 5 1346 276 281 0 0 chrX 99755146 99755203 -66895093 + ID SINE ID 12 68 -156 5 1346 1206 205 0 9 chrX 99755459 99755676 -66894620 + B3 SINE B2 2 216 0 5 1346 627 126 0 21 chrX 99755843 99755940 -66894356 - B1_Mus2 SINE Alu 0 147 53 5 1346 248 245 35 155 chrX 99755880 99755996 -66894300 - MT2B2 LTR ERVL -320 264 163 5 1346 36930 5 0 0 chrX 99756042 99761628 -66888668 + L1Md_A LINE L1 1 5586 -297 5 1346 8998 5 0 0 chrX 99761628 99762623 -66887673 + L1Md_A LINE L1 5587 6581 -1 5 1346 3117 44 10 0 chrX 99762838 99763222 -66887074 + RLTR10 LTR ERVK 1 388 -2 5 1346 2590 221 39 112 chrX 99763296 99764361 -66885935 + RMER17B LTR ERVK 1 899 -9 5 1346 475 236 40 16 chrX 99764479 99764604 -66885692 + MER54A LTR ERVL 1 128 -773 5 1346 2802 148 83 8 chrX 99764946 99765438 -66884858 + RLTR24 LTR ERV1 1 529 0 5 1346 573 202 34 34 chrX 99765611 99765729 -66884567 + B1F2 SINE Alu 32 149 0 5 1346 691 271 0 7 chrX 99765741 99765882 -66884414 + ID_B1 SINE B4 78 217 -7 5 1346 734 306 0 0 chrX 99765895 99766052 -66884244 + RSINE1 SINE B4 9 165 0 5 1346 243 242 86 134 chrX 99765897 99766083 -66884213 + B2_Mm2 SINE B2 10 186 -9 5 1346 215 281 12 12 chrX 99766094 99766132 -66884164 + A-rich Low_complexity Low_complexity 3 41 0 5 1346 406 324 72 0 chrX 99766132 99766271 -66884025 + B1F1 SINE Alu 1 149 0 5 1346 215 281 12 12 chrX 99766271 99766315 -66883981 + A-rich Low_complexity Low_complexity 42 84 0 5 1346 1222 214 73 62 chrX 99766528 99766886 -66883410 - RMER20B LTR ERVK -233 394 33 5 1346 1060 45 0 0 chrX 99767184 99767318 -66882978 + B1_Mus1 SINE Alu 7 140 -8 5 1346 1147 225 114 49 chrX 99767376 99767726 -66882570 + RMER10B LTR ERVL 1 373 -25 5 1346 372 133 0 0 chrX 99767914 99767974 -66882322 + (CAT)n Simple_repeat Simple_repeat 2 61 0 5 1346 201 307 0 51 chrX 99768593 99768672 -66881624 + L2a LINE L2 3258 3332 -94 5 1346 188 208 83 0 chrX 99769169 99769217 -66881079 - MIRc SINE MIR -52 216 165 5 1346 358 269 32 11 chrX 99769249 99769343 -66880953 - PB1D10 SINE Alu -21 96 1 5 1346 216 338 27 0 chrX 99769532 99769606 -66880690 - ID4_ SINE ID -6 77 2 5 1346 470 240 64 32 chrX 99769611 99769736 -66880560 - B1F SINE Alu -11 138 10 5 1346 258 204 36 18 chrX 99770113 99770168 -66880128 - L2b LINE L2 -8 3367 3312 5 1346 284 70 23 0 chrX 99770217 99770260 -66880036 + (TCTCCC)n Simple_repeat Simple_repeat 3 46 0 5 1346 24 67 0 0 chrX 99770602 99770647 -66879649 + AT_rich Low_complexity Low_complexity 1 45 0 5 1346 644 320 87 30 chrX 99770891 99771155 -66879141 - B4 SINE B4 -8 284 6 5 1346 439 281 13 126 chrX 99771342 99771501 -66878795 - RSINE1 SINE B4 0 165 25 5 1346 1142 265 89 35 chrX 99771529 99771891 -66878405 - L1MB3 LINE L1 -20 6163 5778 5 1346 285 29 0 0 chrX 99771891 99771925 -66878371 + (TTTTC)n Simple_repeat Simple_repeat 3 36 0 5 1346 1100 107 47 12 chrX 99771925 99772095 -66878201 - B2_Mm1t SINE B2 -14 179 4 5 1346 1142 265 89 35 chrX 99772095 99772270 -66878026 - L1MB3 LINE L1 -406 5777 5597 5 1346 208 139 0 0 chrX 99772337 99772373 -66877923 + (T)n Simple_repeat Simple_repeat 1 36 0 5 1346 422 264 45 23 chrX 99772419 99772520 -66877776 - Lx9 LINE L1 -74 7570 7469 5 1346 1162 126 11 0 chrX 99772520 99772702 -66877594 - B2_Mm1t SINE B2 -8 185 2 5 1346 422 264 45 23 chrX 99772702 99772821 -66877475 - Lx9 LINE L1 -176 7468 7345 5 1346 926 110 7 14 chrX 99772826 99772973 -66877323 + B1_Mus1 SINE Alu 3 148 0 5 1346 17707 100 12 1 chrX 99772984 99773007 -66877289 + L1_Mus4 LINE L1 3150 3172 -2711 5 1346 294 50 0 0 chrX 99773007 99773047 -66877249 + (TTG)n Simple_repeat Simple_repeat 2 41 0 5 1346 17707 103 31 2 chrX 99773047 99776384 -66873912 + L1_Mus4 LINE L1 3173 6629 -7 5 1346 5027 164 25 33 chrX 99776397 99777222 -66873074 + MERVL_2A-int LTR ERVL 4688 5502 -259 5 1346 651 120 239 0 chrX 99777222 99777339 -66872957 - B1_Mus1 SINE Alu -1 147 3 5 1346 5027 164 25 33 chrX 99777339 99777494 -66872802 + MERVL_2A-int LTR ERVL 5503 5660 -101 5 1346 783 266 45 9 chrX 99777499 99777719 -66872577 + MT2B LTR ERVL 326 553 -48 5 1346 525 267 96 39 chrX 99777746 99777902 -66872394 - MLT1D LTR MaLR -334 171 7 5 1346 14282 16 0 0 chrX 99777919 99779638 -66870658 + L1Md_T LINE L1 3868 5586 -297 5 1346 8526 30 0 0 chrX 99779638 99780634 -66869662 + L1Md_T LINE L1 5587 6582 0 5 1346 218 313 0 57 chrX 99780673 99780761 -66869535 - ID4 SINE ID 0 83 1 5 1346 24 49 0 47 chrX 99780815 99780879 -66869417 + AT_rich Low_complexity Low_complexity 1 61 0 5 1346 1555 27 16 0 chrX 99781077 99781261 -66869035 + B2_Mm1t SINE B2 1 187 -6 5 1346 1114 217 14 0 chrX 99781627 99781834 -66868462 - B3 SINE B2 -6 210 1 5 1346 308 305 131 49 chrX 99782286 99782469 -66867827 - L2c LINE L2 -44 3343 3146 5 1346 912 221 55 60 chrX 99782485 99782702 -66867594 + B3 SINE B2 1 216 0 5 1346 589 188 26 26 chrX 99782779 99782858 -66867438 + B3 SINE B2 4 82 -134 5 1346 1836 143 38 4 chrX 99782858 99783183 -66867113 + ORR1A4 LTR MaLR 1 362 -32 5 1346 453 250 0 0 chrX 99783197 99783285 -66867011 + B3 SINE B2 113 200 -16 5 1346 1300 36 6 0 chrX 99783299 99783466 -66866830 - L1Md_A LINE L1 0 6582 6415 5 1346 247 235 43 14 chrX 99784021 99784090 -66866206 - ID4_ SINE ID -10 73 3 5 1346 1176 183 150 166 chrX 99785910 99786290 -66864006 + ORR1D1 LTR MaLR 1 374 0 5 1346 1812 187 35 67 chrX 99786930 99787302 -66862994 + ORR1B2 LTR MaLR 1 360 -7 5 1346 446 292 19 0 chrX 99787297 99787403 -66862893 - B1_Mur1 SINE Alu -40 109 2 5 1346 393 301 120 0 chrX 99787403 99787472 -66862824 - B4 SINE B4 -206 86 2 5 1346 323 82 0 39 chrX 99788093 99788144 -66862152 + B3 SINE B2 1 49 -167 5 1346 590 324 99 20 chrX 99788227 99788520 -66861776 + RLTR26 LTR ERVK 102 417 -225 5 1346 590 239 65 28 chrX 99788760 99788946 -66861350 + B3 SINE B2 30 215 -1 5 1346 28 29 0 0 chrX 99788946 99788981 -66861315 + AT_rich Low_complexity Low_complexity 1 35 0 5 1346 191 167 49 122 chrX 99789068 99789150 -66861146 + L4 LINE RTE 1954 2029 0 5 1346 354 161 0 0 chrX 99789371 99789464 -66860832 + GA-rich Low_complexity Low_complexity 2 94 0 5 1346 3321 261 26 25 chrX 99789465 99790457 -66859839 + Lx9 LINE L1 6463 7455 -189 5 1346 8291 32 0 2 chrX 99790537 99791515 -66858781 + L1Md_F3 LINE L1 5607 6582 -2 5 1346 216 0 0 0 chrX 99791789 99791813 -66858483 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1346 647 250 0 22 chrX 99791930 99792069 -66858227 + B1F2 SINE Alu 2 137 -12 5 1346 219 130 43 0 chrX 99792248 99792294 -66858002 + A-rich Low_complexity Low_complexity 2 49 0 5 1346 319 290 110 24 chrX 99792974 99793101 -66857195 - MER5A1 DNA MER1_type 0 166 29 5 1346 1144 143 0 22 chrX 99793765 99793944 -66856352 + MTC LTR MaLR 16 190 -231 5 1346 1056 262 58 7 chrX 99793953 99794245 -66856051 + RLTR28B LTR ERVL 10 316 -165 5 1346 1234 170 36 0 chrX 99794316 99794539 -66855757 + MTC LTR MaLR 188 418 -3 5 1346 826 90 389 13 chrX 99794732 99794889 -66855407 - B3 SINE B2 0 216 1 6 1346 743 232 0 21 chrX 99795061 99795202 -66855094 - B1_Mus1 SINE Alu 0 148 11 6 1346 324 280 79 79 chrX 99795215 99795405 -66854891 - B2_Mm2 SINE B2 -4 191 2 6 1346 779 206 69 23 chrX 99795479 99795653 -66854643 - B3A SINE B2 -15 183 2 6 1346 974 302 51 120 chrX 99796139 99796766 -66853530 - RLTR18 LTR ERVK 0 616 33 6 1346 665 291 59 40 chrX 99796830 99797070 -66853226 + MurERV4-int LTR ERVK 1398 1644 -3616 6 1346 3692 60 75 0 chrX 99797070 99797549 -66852747 - L1Md_F2 LINE L1 -12 6570 6056 6 1346 665 291 59 40 chrX 99797549 99797630 -66852666 + MurERV4-int LTR ERVK 1645 1725 -3535 6 1346 1727 181 94 69 chrX 99797623 99798186 -66852110 + MYSERV-int LTR ERVK 5308 5884 -666 6 1346 1236 179 75 84 chrX 99798184 99798571 -66851725 + MYSERV-int LTR ERVK 8594 8905 -54 6 1346 1008 205 117 23 chrX 99798579 99798844 -66851452 + RMER4B LTR ERVK 16 305 -280 6 1346 4908 123 23 28 chrX 99798875 99800749 -66849547 + L1Md_F LINE L1 1 1880 -4003 6 1346 6780 64 4 4 chrX 99800733 99801657 -66848639 + L1Md_F LINE L1 4895 5818 -65 6 1346 682 47 0 0 chrX 99801655 99801741 -66848555 + L1_Mm LINE L1 5456 5541 -342 6 1346 5654 78 1 8 chrX 99801749 99802502 -66847794 + L1Md_F2 LINE L1 5822 6569 -13 6 1346 448 269 25 25 chrX 99802516 99802634 -66847662 + RMER4B LTR ERVK 334 451 -134 6 1346 4887 169 71 62 chrX 99802641 99803273 -66847023 + RMER12 LTR ERVK 1 607 -715 6 1346 1139 50 14 0 chrX 99803273 99803412 -66846884 + B1_Mur4 SINE Alu 1 141 -9 6 1346 186 71 0 0 chrX 99803412 99803440 -66846856 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 6 1346 4887 169 71 62 chrX 99803440 99803856 -66846440 + RMER12 LTR ERVK 608 1059 -263 6 1346 591 221 211 45 chrX 99805844 99806113 -66844183 + RMER4B LTR ERVK 339 588 -23 6 1346 344 269 0 28 chrX 99806114 99806221 -66844075 - L1MC4a LINE L1 -154 7728 7625 6 1346 797 280 29 0 chrX 99806221 99806396 -66843900 + B4A SINE B4 2 181 -111 6 1346 275 267 89 0 chrX 99806418 99806508 -66843788 - L1MC4a LINE L1 -643 7399 7302 6 1346 227 262 16 0 chrX 99806719 99806780 -66843516 - RCHARR1 DNA MER1_type -191 783 722 6 1346 3516 173 127 79 chrX 99807034 99807778 -66842518 + RMER19B LTR ERVK 1 777 -125 6 1346 3541 67 30 0 chrX 99807778 99808240 -66842056 - Lx3_Mus LINE L1 -8 7001 6526 6 1346 3516 173 127 79 chrX 99808240 99808356 -66841940 + RMER19B LTR ERVK 778 901 -1 6 1346 1685 210 148 2 chrX 99808492 99808951 -66841345 - Lx9 LINE L1 -6 7638 7113 6 1346 225 208 67 92 chrX 99808939 99809103 -66841193 - Lx7 LINE L1 -16 7680 7521 6 1346 1539 282 13 25 chrX 99809130 99809146 -66841150 - Lx7 LINE L1 -395 7301 7281 6 1346 4248 111 59 12 chrX 99809146 99809829 -66840467 + RLTR19B LTR ERVK 1 715 0 6 1346 1539 282 13 25 chrX 99809829 99809948 -66840348 - Lx7 LINE L1 -416 7280 7169 6 1346 2297 158 15 17 chrX 99809948 99810354 -66839942 + MTB_Mm LTR MaLR 1 405 -2 6 1346 1539 282 13 25 chrX 99810354 99810690 -66839606 - Lx7 LINE L1 -528 7168 6835 6 1346 490 213 123 23 chrX 99810703 99810833 -66839463 - B1_Mur3 SINE Alu -5 144 2 6 1346 303 277 45 90 chrX 99810833 99810891 -66839405 - MT2B LTR ERVL -434 167 117 6 1346 304 223 18 0 chrX 99810971 99811065 -66839231 - L1M5 LINE L1 -2346 5649 5552 6 1346 186 43 0 0 chrX 99811686 99811709 -66838587 + (GA)n Simple_repeat Simple_repeat 2 24 0 6 1346 387 251 254 12 chrX 99811710 99811879 -66838417 + B3 SINE B2 4 213 -3 6 1346 1208 105 22 0 chrX 99812289 99812470 -66837826 + ORR1B2 LTR MaLR 183 367 0 6 1346 344 253 0 6 chrX 99812781 99812872 -66837424 + ID4_ SINE ID 18 106 -46 6 1346 573 200 15 8 chrX 99813051 99813182 -66837114 - RMER1A Other Other -854 176 45 6 1346 875 178 103 83 chrX 99813563 99813815 -66836481 + RLTR20C LTR ERVK 1 257 -277 6 1346 658 92 11 98 chrX 99813878 99814010 -66836286 + L1_Mus4 LINE L1 5853 5980 -656 6 1346 5176 94 14 138 chrX 99814010 99814462 -66835834 + MusHAL1 LINE L1 1173 1507 -1205 6 1346 399 273 0 0 chrX 99814462 99814539 -66835757 + ID4_ SINE ID 2 78 -5 6 1346 5176 94 14 138 chrX 99814539 99815191 -66835105 + MusHAL1 LINE L1 1508 2140 -572 6 1346 311 266 129 45 chrX 99815188 99815389 -66834907 + L1MC4 LINE L1 7699 7916 -126 6 1346 696 78 0 42 chrX 99815636 99815756 -66834540 + (TTTC)n Simple_repeat Simple_repeat 1 115 0 6 1346 1111 50 58 0 chrX 99815756 99815895 -66834401 - B1_Mus1 SINE Alu 0 148 2 6 1346 317 333 50 33 chrX 99817122 99817167 -66833129 - MIRb SINE MIR -60 208 161 6 1346 762 169 289 0 chrX 99817167 99817333 -66832963 - B3 SINE B2 0 216 3 6 1346 375 315 31 23 chrX 99817333 99817480 -66832816 - MIR SINE MIR -108 160 5 6 1346 22 0 0 0 chrX 99817494 99817516 -66832780 + AT_rich Low_complexity Low_complexity 1 22 0 6 1346 370 219 16 47 chrX 99817516 99817645 -66832651 - L1MC4a LINE L1 -2 7880 7756 6 1346 236 358 59 84 chrX 99817648 99817767 -66832529 - B4A SINE B4 -99 193 78 6 1346 511 278 103 66 chrX 99818038 99818434 -66831862 - L1MC4a LINE L1 -626 7256 6846 6 1346 259 286 60 83 chrX 99818438 99818451 -66831845 + MT2B LTR ERVL 147 227 -373 6 1346 349 286 0 0 chrX 99818451 99818521 -66831775 + B1_Mus2 SINE Alu 1 70 -77 6 1346 830 184 0 0 chrX 99818526 99818662 -66831634 + B1_Mus1 SINE Alu 4 139 -9 6 1346 306 50 0 0 chrX 99818662 99818702 -66831594 + (CAAAC)n Simple_repeat Simple_repeat 2 41 0 6 1346 922 257 62 19 chrX 99818703 99819028 -66831268 + L1M2 LINE L1 5434 5772 -528 6 1346 303 85 0 0 chrX 99819444 99819491 -66830805 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 6 1346 262 309 0 0 chrX 99819501 99819569 -66830727 - RSINE1 SINE B4 -96 69 2 6 1346 23 0 0 0 chrX 99819575 99819598 -66830698 + AT_rich Low_complexity Low_complexity 1 23 0 6 1346 182 118 29 0 chrX 99819770 99819804 -66830492 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 6 1346 793 187 0 28 chrX 99819834 99819977 -66830319 - B1_Mur1 SINE Alu -8 141 3 6 1346 363 299 27 5 chrX 99820001 99820186 -66830110 - L1ME2 LINE L1 -280 5884 5696 6 1346 708 268 130 11 chrX 99820449 99820634 -66829662 + ID_B1 SINE B4 1 207 -17 6 1346 26 50 0 0 chrX 99820635 99820675 -66829621 + AT_rich Low_complexity Low_complexity 1 40 0 6 1346 945 248 22 104 chrX 99821322 99821687 -66828609 - L1MB8 LINE L1 -298 5880 5546 6 1346 651 284 34 0 chrX 99821719 99821867 -66828429 - RSINE1 SINE B4 -2 163 11 6 1346 554 299 25 17 chrX 99821877 99822115 -66828181 - L1MB8 LINE L1 -623 5555 5316 6 1346 855 203 124 6 chrX 99822136 99822314 -66827982 - B3 SINE B2 -16 200 2 6 1346 789 41 0 0 chrX 99822341 99822438 -66827858 + (TC)n Simple_repeat Simple_repeat 2 98 0 6 1346 243 293 195 0 chrX 99822438 99822454 -66827842 - PB1D9 SINE Alu -12 108 11 6 1346 248 318 61 0 chrX 99822454 99822520 -66827776 - ID_B1 SINE B4 -63 161 92 6 1346 360 111 42 0 chrX 99822640 99822712 -66827584 + (CATA)n Simple_repeat Simple_repeat 3 77 0 6 1346 942 171 32 0 chrX 99822750 99822908 -66827388 + RLTR17 LTR ERVK 202 364 -328 6 1346 387 0 0 0 chrX 99822909 99822952 -66827344 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 6 1346 435 250 101 19 chrX 99822952 99823078 -66827218 - ID_B1 SINE B4 -18 206 79 6 1346 230 213 26 13 chrX 99823100 99823176 -66827120 - L1MB8 LINE L1 -987 5159 5083 6 1346 639 273 7 0 chrX 99823213 99823352 -66826944 - ID_B1 SINE B4 0 224 85 6 1346 210 254 17 17 chrX 99823352 99823412 -66826884 + CT-rich Low_complexity Low_complexity 4 63 0 6 1346 476 222 40 0 chrX 99823414 99823513 -66826783 - PB1D10 SINE Alu -5 112 10 6 1346 427 292 126 26 chrX 99823522 99823793 -66826503 - L1M4b LINE L1 -5923 1411 1114 6 1346 1763 134 91 0 chrX 99823780 99824100 -66826196 + L1VL2 LINE L1 65 413 -5922 6 1346 300 143 0 0 chrX 99824089 99824145 -66826151 + L1VL2 LINE L1 116 171 -6164 6 1346 3270 165 123 32 chrX 99824145 99824965 -66825331 + RMER17A2 LTR ERVK 12 906 0 6 1346 13617 79 9 5 chrX 99824982 99827625 -66822671 + L1VL2 LINE L1 334 2987 -628 6 1346 253 115 213 0 chrX 99827697 99827738 -66822558 + L1_Mur1 LINE L1 5435 5483 -403 6 1346 720 95 8 38 chrX 99827738 99827869 -66822427 + Lx LINE L1 6527 6653 -1 6 1346 253 115 213 0 chrX 99827869 99827888 -66822408 + L1_Mur1 LINE L1 5484 5506 -380 6 1346 347 316 96 24 chrX 99827913 99828205 -66822091 - L1M4b LINE L1 -6202 1132 820 6 1346 967 196 24 6 chrX 99828228 99828397 -66821899 - B3 SINE B2 -10 206 35 6 1346 310 359 107 6 chrX 99828672 99828840 -66821456 - L1M4b LINE L1 -6834 500 316 6 1346 780 181 54 42 chrX 99828858 99829025 -66821271 + URR1B DNA MER1_type 54 222 -3 6 1346 1255 72 0 12 chrX 99829025 99829183 -66821113 + B2_Mm2 SINE B2 2 158 -37 6 1346 207 0 0 0 chrX 99829183 99829206 -66821090 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 6 1346 373 277 160 34 chrX 99829251 99829520 -66820776 - L1M4b LINE L1 -7021 313 11 6 1346 2232 67 37 25 chrX 99829556 99829877 -66820419 + IAPLTR2b LTR ERVK 1 325 -2 6 1346 957 114 14 7 chrX 99830386 99830527 -66819769 + B1_Mur4 SINE Alu 1 142 -8 6 1346 28 0 0 0 chrX 99830540 99830568 -66819728 + AT_rich Low_complexity Low_complexity 1 28 0 6 1346 441 36 0 0 chrX 99830792 99830847 -66819449 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 1346 536 62 0 40 chrX 99830940 99831041 -66819255 + L1Md_F2 LINE L1 6486 6582 0 6 1346 351 246 0 0 chrX 99831064 99831133 -66819163 + ID4_ SINE ID 14 82 -1 6 1346 308 269 191 55 chrX 99831239 99831349 -66818947 - B1_Mur1 SINE Alu -15 134 10 6 1346 23 0 0 0 chrX 99831583 99831606 -66818690 + AT_rich Low_complexity Low_complexity 1 23 0 6 1346 21 57 0 0 chrX 99832216 99832251 -66818045 + AT_rich Low_complexity Low_complexity 1 35 0 6 1346 927 238 15 20 chrX 99832426 99832623 -66817673 - B3A SINE B2 -2 196 1 6 1346 280 227 45 15 chrX 99832722 99832789 -66817507 + ID4_ SINE ID 1 69 -14 6 1346 423 0 0 0 chrX 99832789 99832836 -66817460 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1346 287 271 172 0 chrX 99833237 99833388 -66816908 + L1M5 LINE L1 5221 5397 -749 6 1346 2352 101 65 13 chrX 99833680 99834052 -66816244 - Lx LINE L1 -1 6653 6263 6 1346 271 266 0 0 chrX 99834861 99834925 -66815371 - B3 SINE B2 -4 212 149 6 1346 255 43 64 0 chrX 99835431 99835478 -66814818 - B2_Mm2 SINE B2 -8 187 138 6 1346 319 144 0 72 chrX 99835468 99835537 -66814759 - B2_Mm2 SINE B2 -107 109 47 6 1346 1353 99 0 0 chrX 99835606 99835787 -66814509 - B2_Mm2 SINE B2 -13 182 2 6 1346 254 323 21 71 chrX 99836107 99836247 -66814049 - MER5B DNA MER1_type -21 157 25 6 1346 561 68 0 0 chrX 99837122 99837196 -66813100 + (GA)n Simple_repeat Simple_repeat 1 74 0 6 1346 201 154 0 0 chrX 99837380 99837419 -66812877 + (CAAAC)n Simple_repeat Simple_repeat 3 41 0 7 1346 627 188 150 93 chrX 99837888 99838135 -66812161 - L1MA9 LINE L1 -5 6307 6047 7 1346 348 185 229 25 chrX 99838381 99838503 -66811793 + B1F SINE Alu 1 147 -2 7 1346 419 250 28 0 chrX 99838521 99838629 -66811667 + PB1D10 SINE Alu 1 111 -6 7 1346 286 250 63 11 chrX 99838677 99838770 -66811526 + PB1D10 SINE Alu 13 108 -9 7 1346 234 0 0 0 chrX 99839899 99839925 -66810371 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 7 1346 479 323 103 33 chrX 99841108 99841380 -66808916 - MamRep605 Unknown Unknown -24 852 562 7 1346 352 205 0 64 chrX 99841690 99841784 -66808512 - L1MA6 LINE L1 -2 6298 6211 7 1346 231 274 16 0 chrX 99842022 99842084 -66808212 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 1346 478 29 14 14 chrX 99842085 99842154 -66808142 + (GA)n Simple_repeat Simple_repeat 2 70 0 7 1346 338 316 0 0 chrX 99842161 99842256 -66808040 - B4A SINE B4 -23 269 175 7 1346 406 221 23 0 chrX 99842409 99842495 -66807801 - B1_Mur1 SINE Alu -1 148 61 7 1346 247 204 19 0 chrX 99842463 99842517 -66807779 - ID_B1 SINE B4 -25 199 145 7 1346 2248 134 21 5 chrX 99842517 99842906 -66807390 + Lx7 LINE L1 4081 4475 -1405 7 1346 2278 115 25 3 chrX 99842906 99843264 -66807032 + RLTR17 LTR ERVK 1 366 -326 7 1346 1151 82 0 13 chrX 99843296 99843445 -66806851 - B1_Mus2 SINE Alu 0 147 1 7 1346 1254 146 5 5 chrX 99843445 99843651 -66806645 + RLTR17 LTR ERVK 351 556 -136 7 1346 378 0 0 0 chrX 99843651 99843693 -66806603 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 1346 1619 129 34 7 chrX 99843694 99843982 -66806314 - MT2B LTR ERVL -70 531 140 7 1346 4880 73 0 3 chrX 99843982 99844613 -66805683 + L1Md_F2 LINE L1 5941 6569 -13 7 1346 643 167 27 27 chrX 99844613 99844740 -66805556 - MT2B LTR ERVL -336 139 1 7 1346 2915 141 73 40 chrX 99844740 99845286 -66805010 + Lx7 LINE L1 5149 5712 -168 7 1346 1841 158 50 5 chrX 99845286 99845894 -66804402 - RLTR33 LTR ERVK 0 678 6 7 1346 2181 202 75 16 chrX 99846023 99846572 -66803724 + Lx7 LINE L1 5711 6291 -1405 7 1346 1852 205 60 32 chrX 99846572 99847036 -66803260 + RMER20A LTR ERVK 1 477 -39 7 1346 4776 211 104 25 chrX 99847564 99847881 -66802415 + Lx6 LINE L1 6260 6559 -901 7 1346 2296 139 284 8 chrX 99847881 99847925 -66802371 - MT2B LTR ERVL 0 601 548 7 1346 393 22 0 0 chrX 99847925 99847971 -66802325 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1346 2296 139 284 8 chrX 99847971 99848397 -66801899 - MT2B LTR ERVL -54 547 2 7 1346 4776 201 112 21 chrX 99848397 99849197 -66801099 + Lx6 LINE L1 6560 7459 -1 7 1346 938 118 17 64 chrX 99849251 99849423 -66800873 + B2_Mm2 SINE B2 1 164 -31 7 1346 480 180 0 33 chrX 99849470 99849562 -66800734 + 4.5SRNA scRNA scRNA 2 90 -4 7 1346 576 155 10 10 chrX 99849572 99849676 -66800620 + B1_Mus2 SINE Alu 44 147 0 7 1346 712 232 67 53 chrX 99849716 99849925 -66800371 + B3 SINE B2 5 216 0 7 1346 691 310 64 30 chrX 99850223 99850417 -66799879 - B4 SINE B4 -48 244 42 7 1346 2119 86 80 32 chrX 99850417 99850729 -66799567 + ORR1A2 LTR MaLR 1 327 0 7 1346 691 310 64 30 chrX 99850729 99850770 -66799526 - B4 SINE B4 -251 41 1 7 1346 227 277 36 12 chrX 99850896 99850980 -66799316 - MIRb SINE MIR -17 251 166 7 1346 216 0 0 0 chrX 99852831 99852855 -66797441 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1346 279 0 0 0 chrX 99852958 99852989 -66797307 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 1346 246 329 0 0 chrX 99853083 99853162 -66797134 + CT-rich Low_complexity Low_complexity 3 81 0 7 1346 470 188 59 10 chrX 99853942 99854044 -66796252 - B1_Mur2 SINE Alu 0 149 43 7 1346 249 179 17 35 chrX 99854215 99854273 -66796023 + PB1D9 SINE Alu 3 59 -61 7 1346 254 0 0 159 chrX 99854274 99854400 -66795896 + (CAGAG)n Simple_repeat Simple_repeat 5 110 0 7 1346 420 198 66 0 chrX 99854403 99854494 -66795802 + B1_Mus2 SINE Alu 42 138 -9 7 1346 306 73 0 0 chrX 99854494 99854535 -66795761 + (TAA)n Simple_repeat Simple_repeat 2 42 0 7 1346 185 295 113 9 chrX 99855530 99855636 -66794660 + MIRb SINE MIR 53 169 -99 7 1346 1920 60 0 0 chrX 99855691 99855926 -66794370 - L1_Mus1 LINE L1 0 6567 6333 7 1346 342 0 0 0 chrX 99856133 99856171 -66794125 + (CAA)n Simple_repeat Simple_repeat 2 39 0 7 1346 505 113 0 0 chrX 99856379 99856450 -66793846 - L1_Mur3 LINE L1 -804 5076 5006 7 1346 8615 32 1 0 chrX 99856449 99857444 -66792852 - L1Md_T LINE L1 0 6582 5587 7 1346 216 100 0 0 chrX 99857469 99857499 -66792797 - B1_Mus1 SINE Alu -116 32 3 7 1346 8250 93 14 8 chrX 99857500 99859471 -66790825 + L1_Mus3 LINE L1 4649 6619 -19 7 1346 378 0 0 0 chrX 99859471 99859513 -66790783 + (TAA)n Simple_repeat Simple_repeat 3 44 0 7 1346 205 297 0 45 chrX 99859618 99859685 -66790611 + CT-rich Low_complexity Low_complexity 2 65 0 7 1346 2316 121 17 14 chrX 99859782 99860144 -66790152 - ORR1B2 LTR MaLR 0 367 5 7 1346 818 289 0 34 chrX 99860330 99860538 -66789758 - B3 SINE B2 -10 206 6 7 1346 316 256 50 25 chrX 99860535 99860655 -66789641 - MER90 LTR ERV1 -250 325 203 7 1346 365 306 39 0 chrX 99862034 99862211 -66788085 - L1MD LINE L1 -441 5738 5555 7 1346 2979 159 116 19 chrX 99862225 99862854 -66787442 - RMER6C LTR ERVK 0 690 1 7 1346 414 296 70 9 chrX 99862893 99863183 -66787113 - L1MD LINE L1 -741 5438 5127 7 1346 919 205 20 10 chrX 99863261 99863458 -66786838 - B3 SINE B2 0 216 18 7 1346 627 152 39 52 chrX 99863523 99863676 -66786620 - Lx9 LINE L1 -6 7638 7488 7 1346 450 298 126 32 chrX 99863745 99864054 -66786242 - RMER20B LTR ERVK -143 484 147 7 1346 564 256 236 11 chrX 99864256 99864524 -66785772 - MERVK26-int LTR ERVK -55 6864 6537 7 1346 540 0 0 0 chrX 99864649 99864709 -66785587 + (TC)n Simple_repeat Simple_repeat 1 60 0 7 1346 1542 286 32 29 chrX 99864716 99865242 -66785054 - MERVK26-int LTR ERVK -619 6300 5773 7 1346 4791 222 46 14 chrX 99865569 99866531 -66783765 - MERVK26-int LTR ERVK -1543 5376 4398 7 1346 423 0 0 0 chrX 99866531 99866578 -66783718 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1346 4791 222 46 14 chrX 99866578 99866658 -66783638 - MERVK26-int LTR ERVK -2522 4397 4302 7 1346 17847 153 28 47 chrX 99866820 99867007 -66783289 - MusHAL1 LINE L1 -1199 4687 4507 7 1346 1129 128 29 0 chrX 99867007 99867179 -66783117 + B2_Mm1t SINE B2 3 179 -14 7 1346 17847 153 28 47 chrX 99867179 99867198 -66783098 - MusHAL1 LINE L1 -1380 4506 4488 7 1346 299 146 406 0 chrX 99867198 99867294 -66783002 + B2_Mm2 SINE B2 47 181 -14 7 1346 17847 153 28 47 chrX 99867294 99868284 -66782012 - MusHAL1 LINE L1 -1380 4487 3492 7 1346 387 0 0 0 chrX 99868284 99868327 -66781969 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 7 1346 17847 138 22 42 chrX 99868327 99871029 -66779267 - MusHAL1 LINE L1 -2395 3491 774 7 1346 1259 224 148 33 chrX 99871022 99871592 -66778704 - L1VL2 LINE L1 -5505 830 109 7 1346 1524 157 19 29 chrX 99871593 99872027 -66778269 - RLTR21 LTR ERVK -1097 475 1 7 1346 2691 157 65 38 chrX 99872266 99873024 -66777272 - RLTR13D3 LTR ERVK -82 1032 1 7 1346 2129 201 31 12 chrX 99873028 99873441 -66776855 - MTC LTR MaLR 0 421 1 7 1346 216 0 0 0 chrX 99873613 99873637 -66776659 + (TA)n Simple_repeat Simple_repeat 1 24 0 7 1346 1136 44 0 0 chrX 99876307 99876444 -66773852 - L1_Mus1 LINE L1 -728 5839 5703 7 168 3987 77 2 6 chrX 99876444 99876969 -66773327 + L1Md_T LINE L1 6057 6579 -3 7 1347 449 313 39 42 chrX 99877030 99877340 -66772956 + L1ME2 LINE L1 5848 6156 -8 7 1347 25 31 0 0 chrX 99877395 99877427 -66772869 + AT_rich Low_complexity Low_complexity 1 32 0 7 1347 210 355 66 8 chrX 99878237 99878359 -66771937 - L2b LINE L2 0 3375 3247 7 1347 258 106 0 0 chrX 99879896 99879943 -66770353 + (T)n Simple_repeat Simple_repeat 1 47 0 7 1347 2528 119 5 10 chrX 99880121 99880527 -66769769 + RLTR9E LTR ERVK 6 409 0 7 1347 537 254 143 21 chrX 99880740 99880929 -66769367 - B3 SINE B2 -1 215 4 7 1347 2927 154 103 30 chrX 99882777 99883727 -66766569 - RLTR13D1 LTR ERVK -58 965 1 7 1347 341 349 48 86 chrX 99885163 99885536 -66764760 + MLT1A LTR MaLR 1 359 -15 7 1347 205 255 0 18 chrX 99888182 99888238 -66762058 + CT-rich Low_complexity Low_complexity 2 56 0 7 1347 768 52 0 0 chrX 99889667 99889764 -66760532 + (TTTC)n Simple_repeat Simple_repeat 2 98 0 7 1347 324 333 99 77 chrX 99890209 99890573 -66759723 - MLT1F2 LTR MaLR -22 538 167 7 1347 455 327 6 38 chrX 99892064 99892223 -66758073 + ID_B1 SINE B4 1 154 -70 7 1347 4789 191 27 13 chrX 99892353 99893589 -66756707 - Lx2B LINE L1 -375 6625 5375 7 1347 974 266 14 11 chrX 99893580 99893917 -66756379 + Lx2B LINE L1 6625 7058 0 7 1347 285 286 44 0 chrX 99896038 99896129 -66754167 + L1_Rod LINE L1 5103 5197 -650 7 1347 307 270 27 8 chrX 99896308 99896423 -66753873 - PB1D10 SINE Alu -29 120 1 7 1347 480 18 0 0 chrX 99896564 99896621 -66753675 + (TG)n Simple_repeat Simple_repeat 1 57 0 7 1347 405 0 0 0 chrX 99896621 99896665 -66753631 + (GA)n Simple_repeat Simple_repeat 1 45 0 7 1347 233 304 76 0 chrX 99896785 99896876 -66753420 + B1F2 SINE Alu 1 98 -51 7 1347 938 211 18 132 chrX 99896876 99897203 -66753093 - ORR1D1 LTR MaLR 0 374 85 7 1347 912 282 61 32 chrX 99897716 99898217 -66752079 + L1MA9 LINE L1 5256 5768 -523 7 1347 227 321 12 0 chrX 99898389 99898470 -66751826 + ID2 SINE ID 2 83 0 7 1347 207 0 0 0 chrX 99898948 99898971 -66751325 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1347 280 276 134 0 chrX 99899035 99899162 -66751134 + L1MA9 LINE L1 6139 6282 -30 7 1347 494 199 361 0 chrX 99899437 99899603 -66750693 - URR1A DNA MER1_type 0 226 1 7 1347 180 0 0 0 chrX 99899896 99899916 -66750380 + (TC)n Simple_repeat Simple_repeat 1 20 0 7 1347 858 87 0 0 chrX 99899916 99900053 -66750243 + (CA)n Simple_repeat Simple_repeat 1 138 0 7 1347 1072 238 136 18 chrX 99900262 99900600 -66749696 + MTD LTR MaLR 30 407 -12 7 1347 436 360 11 17 chrX 99900712 99900890 -66749406 + MTEa LTR MaLR 2 178 -201 7 1347 1236 99 5 54 chrX 99901007 99901210 -66749086 - B2_Mm2 SINE B2 -1 194 2 7 1347 209 98 0 24 chrX 99901763 99901805 -66748491 + (TGGG)n Simple_repeat Simple_repeat 3 43 0 7 1347 2643 35 16 6 chrX 99903579 99903897 -66746399 + L1Md_F2 LINE L1 6250 6570 -12 7 1347 252 0 0 0 chrX 99903903 99903931 -66746365 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 8 1347 572 180 22 34 chrX 99905410 99905588 -66744708 + C-rich Low_complexity Low_complexity 4 179 0 8 1347 469 297 0 0 chrX 99905588 99905716 -66744580 - B1F SINE Alu -16 133 6 8 1347 304 333 7 55 chrX 99905716 99905734 -66744562 - ID_B1 SINE B4 -16 208 70 8 1347 659 275 80 0 chrX 99905748 99905948 -66744348 + B3 SINE B2 1 216 0 8 1347 301 296 118 0 chrX 99905982 99906117 -66744179 - L1M5 LINE L1 -2314 3832 3682 8 1347 231 333 96 0 chrX 99907405 99907540 -66742756 + MIR3 SINE MIR 46 193 -15 8 1347 208 241 11 88 chrX 99907847 99907938 -66742358 + GA-rich Low_complexity Low_complexity 1 84 0 8 1347 312 138 0 0 chrX 99909198 99909263 -66741033 + (CAA)n Simple_repeat Simple_repeat 3 67 0 8 1347 212 203 0 33 chrX 99909560 99909621 -66740675 + A-rich Low_complexity Low_complexity 3 61 0 8 1347 523 248 43 21 chrX 99910195 99910335 -66739961 - ID_B1 SINE B4 -2 222 80 8 1347 2696 84 68 10 chrX 99910835 99911233 -66739063 - BGLII LTR ERVK 0 421 1 8 1347 3296 210 40 46 chrX 99911234 99912174 -66738122 - RMER3D-int LTR ERVK -1 2841 1907 8 1347 3011 204 133 96 chrX 99912155 99913317 -66736979 - RMER3D-int LTR ERVK -1146 1696 491 8 1347 2808 80 57 8 chrX 99913729 99913946 -66736350 - BGLII LTR ERVK 0 421 183 8 1347 459 0 0 0 chrX 99913946 99913997 -66736299 + (TTCC)n Simple_repeat Simple_repeat 1 51 0 8 1347 585 42 0 0 chrX 99913997 99914068 -66736228 + (TC)n Simple_repeat Simple_repeat 2 73 0 8 1347 2808 80 57 8 chrX 99914068 99914250 -66736046 - BGLII LTR ERVK -239 182 2 8 1347 261 161 35 18 chrX 99914250 99914307 -66735989 - LTR83 LTR ERVL -122 658 601 8 1347 257 344 85 62 chrX 99914474 99914604 -66735692 - B1F SINE Alu -16 133 1 8 1347 588 81 30 0 chrX 99916892 99916991 -66733305 - L1_Mus3 LINE L1 -7 6631 6530 8 1347 531 69 0 0 chrX 99917831 99917903 -66732393 + (TG)n Simple_repeat Simple_repeat 2 73 0 8 1347 841 208 24 47 chrX 99918056 99918268 -66732028 - B3 SINE B2 -9 207 1 8 1347 524 305 71 56 chrX 99918327 99918664 -66731632 + L1_Rod LINE L1 5467 5808 -39 8 1347 396 147 0 0 chrX 99918720 99918795 -66731501 + (CA)n Simple_repeat Simple_repeat 2 76 0 8 1347 213 39 0 0 chrX 99918912 99918938 -66731358 + (T)n Simple_repeat Simple_repeat 1 26 0 8 1347 408 88 0 0 chrX 99921754 99921811 -66728485 + (TG)n Simple_repeat Simple_repeat 1 57 0 8 1347 606 297 6 0 chrX 99921811 99921976 -66728320 - B3 SINE B2 -50 166 1 8 1347 1323 254 67 12 chrX 99922465 99922807 -66727489 - MTE2b LTR MaLR 0 379 19 8 1347 338 186 14 0 chrX 99923114 99923184 -66727112 - URR1B DNA MER1_type 0 225 155 8 1347 348 299 68 0 chrX 99923292 99923439 -66726857 - MT2A LTR ERVL -306 227 71 8 1347 343 276 114 0 chrX 99923375 99923480 -66726816 - MTE2b LTR MaLR -245 134 18 8 1347 272 70 23 0 chrX 99923506 99923549 -66726747 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1347 285 75 0 0 chrX 99923960 99924000 -66726296 + (TC)n Simple_repeat Simple_repeat 1 40 0 8 1347 592 342 43 49 chrX 99924755 99925105 -66725191 - MTEa LTR MaLR -31 348 1 8 1347 270 81 0 0 chrX 99925759 99925796 -66724500 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 8 1347 979 91 7 20 chrX 99925797 99925943 -66724353 - B1_Mm SINE Alu -2 145 2 8 1347 442 272 15 7 chrX 99926934 99927071 -66723225 + B1F SINE Alu 1 138 -11 8 1347 739 268 19 14 chrX 99927084 99927292 -66723004 + B3 SINE B2 2 210 -6 8 1347 222 37 0 0 chrX 99927491 99927518 -66722778 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 1347 194 0 0 37 chrX 99927616 99927643 -66722653 + (TTTTC)n Simple_repeat Simple_repeat 5 30 0 8 1347 390 261 62 0 chrX 99927643 99927654 -66722642 - B4A SINE B4 -46 246 236 8 1347 894 109 0 8 chrX 99927654 99927783 -66722513 - B1_Mus1 SINE Alu -19 129 2 8 1347 390 272 45 0 chrX 99927783 99927943 -66722353 - B4A SINE B4 -57 235 67 8 1347 594 180 0 32 chrX 99927979 99928105 -66722191 - B1_Mus2 SINE Alu -5 142 21 8 1347 595 239 222 0 chrX 99929553 99929729 -66720567 - B3 SINE B2 0 216 2 8 1347 534 135 0 0 chrX 99929729 99929833 -66720463 + (GA)n Simple_repeat Simple_repeat 2 105 0 8 1347 396 0 0 0 chrX 99930198 99930242 -66720054 + (TTA)n Simple_repeat Simple_repeat 2 45 0 8 1347 354 217 7 0 chrX 99932396 99932541 -66717755 + GA-rich Low_complexity Low_complexity 1 146 0 8 1347 226 274 0 0 chrX 99932541 99932592 -66717704 + A-rich Low_complexity Low_complexity 1 51 0 8 1347 914 119 11 28 chrX 99932592 99932773 -66717523 + GA-rich Low_complexity Low_complexity 3 180 0 8 1347 198 24 45 68 chrX 99936961 99937005 -66713291 + (CAAAC)n Simple_repeat Simple_repeat 2 44 0 8 1347 1367 177 74 5 chrX 99937975 99938288 -66712008 + MYSERV16_I-int LTR ERVK 1573 1864 -462 8 1347 834 184 60 19 chrX 99938269 99938501 -66711795 + MYSERV16_I-int LTR ERVK 6306 6495 -55 8 1347 1960 180 11 3 chrX 99938514 99938870 -66711426 + RLTR15 LTR ERVK 1 359 0 8 1347 789 11 0 0 chrX 99938962 99939052 -66711244 + (TA)n Simple_repeat Simple_repeat 2 91 0 8 1347 249 57 0 0 chrX 99939082 99939117 -66711179 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 1347 1778 50 5 0 chrX 99939306 99939527 -66710769 + L1Md_T LINE L1 6359 6580 -2 8 1347 2985 99 9 18 chrX 99939756 99940209 -66710087 - L1_Mus3 LINE L1 -3 6635 6187 8 1347 1940 268 108 28 chrX 99940938 99941756 -66708540 + Lx9 LINE L1 6488 7371 -273 8 1347 3431 199 108 27 chrX 99941924 99942764 -66707532 - RMER13B LTR ERVK 0 908 1 8 1347 220 146 20 20 chrX 99942869 99942918 -66707378 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1347 401 301 150 22 chrX 99943084 99943264 -66707032 - B3 SINE B2 -5 211 9 8 1347 303 71 0 0 chrX 99943318 99943360 -66706936 + (TC)n Simple_repeat Simple_repeat 1 42 0 8 1347 612 339 43 49 chrX 99944114 99944464 -66705832 - MTEa LTR MaLR -31 348 1 8 1347 270 81 0 0 chrX 99945124 99945161 -66705135 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 8 1347 979 91 7 20 chrX 99945162 99945308 -66704988 - B1_Mm SINE Alu -2 145 2 8 1347 442 272 15 7 chrX 99946299 99946436 -66703860 + B1F SINE Alu 1 138 -11 8 1347 739 268 19 14 chrX 99946449 99946657 -66703639 + B3 SINE B2 2 210 -6 8 1347 296 64 21 0 chrX 99946856 99946903 -66703393 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 1347 216 0 0 0 chrX 99947001 99947025 -66703271 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 8 1347 809 118 0 8 chrX 99947029 99947157 -66703139 - B1_Mus1 SINE Alu -20 128 2 8 1347 376 285 69 17 chrX 99947157 99947323 -66702973 - B4A SINE B4 -56 236 62 8 1347 483 175 25 34 chrX 99947353 99947471 -66702825 - B1_Mur3 SINE Alu -5 144 28 8 1347 543 248 0 0 chrX 99948414 99948543 -66701753 - B3 SINE B2 -86 130 2 8 1347 480 130 0 0 chrX 99948543 99948635 -66701661 + (GA)n Simple_repeat Simple_repeat 2 93 0 8 1347 243 79 0 0 chrX 99949000 99949038 -66701258 + (TTA)n Simple_repeat Simple_repeat 2 39 0 8 1347 262 255 37 28 chrX 99951154 99951263 -66699033 + GA-rich Low_complexity Low_complexity 1 110 0 8 1347 819 105 0 0 chrX 99951265 99951389 -66698907 + (GGAGA)n Simple_repeat Simple_repeat 5 128 0 8 1347 182 141 0 99 chrX 99951396 99951467 -66698829 + A-rich Low_complexity Low_complexity 2 65 0 8 1347 1073 84 7 0 chrX 99951471 99951625 -66698671 + (GGGAA)n Simple_repeat Simple_repeat 1 155 0 8 1347 201 152 0 0 chrX 99954208 99954241 -66696055 + T-rich Low_complexity Low_complexity 2 34 0 8 1347 198 24 45 68 chrX 99955812 99955856 -66694440 + (CAAAC)n Simple_repeat Simple_repeat 2 44 0 8 1347 1346 174 69 4 chrX 99956862 99957138 -66693158 + MYSERV16_I-int LTR ERVK 1571 1864 -462 8 1347 834 184 60 19 chrX 99957119 99957351 -66692945 + MYSERV16_I-int LTR ERVK 6306 6495 -55 8 1347 1970 180 11 3 chrX 99957364 99957720 -66692576 + RLTR15 LTR ERVK 1 359 0 8 1347 480 178 0 0 chrX 99957811 99957918 -66692378 + (TA)n Simple_repeat Simple_repeat 2 108 0 8 1347 387 0 0 0 chrX 99957948 99957991 -66692305 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 1347 2951 103 9 18 chrX 99958390 99958843 -66691453 - L1_Mus3 LINE L1 -3 6635 6187 8 1347 1991 266 107 26 chrX 99959571 99960389 -66689907 + Lx9 LINE L1 6488 7371 -273 8 1347 1953 191 83 29 chrX 99960557 99961365 -66688931 - RMER13B LTR ERVK 0 908 17 8 1347 917 187 35 125 chrX 99961365 99961716 -66688580 + RLTRETN_Mm LTR ERVK 1 409 0 8 1347 11952 101 11 7 chrX 99961717 99963366 -66686930 + ETnERV2-int LTR ERVK 2 1656 -1658 8 1347 766 238 51 32 chrX 99963603 99963820 -66686476 + ETnERV2-int LTR ERVK 1790 2010 -4157 8 1347 15088 48 0 2 chrX 99963841 99965671 -66684625 + L1Md_F2 LINE L1 3759 5585 -298 8 1347 8304 40 2 8 chrX 99965672 99966674 -66683622 + L1Md_F2 LINE L1 5587 6582 0 8 1347 606 325 40 43 chrX 99966695 99967017 -66683279 + ETnERV2-int LTR ERVK 2037 2357 -3810 8 1347 21173 162 28 19 chrX 99967018 99970834 -66679462 + ETnERV2-int LTR ERVK 1518 7203 -203 8 1347 306 245 199 14 chrX 99970836 99970977 -66679319 + RLTR13B1 LTR ERVK 155 321 -572 8 1347 1205 148 22 26 chrX 99970977 99971206 -66679090 + MMETn-int LTR ERVK 4617 4844 0 8 1347 609 204 75 102 chrX 99971206 99971585 -66678711 + RLTRETN_Mm LTR ERVK 1 409 0 8 1347 381 22 0 0 chrX 99971717 99971763 -66678533 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1347 237 179 233 23 chrX 99971874 99971960 -66678336 + Lx9 LINE L1 7527 7630 -14 8 1347 1033 258 67 59 chrX 99971960 99972331 -66677965 + ORR1D1 LTR MaLR 1 374 0 8 1347 32 67 0 0 chrX 99972639 99972699 -66677597 + AT_rich Low_complexity Low_complexity 1 60 0 8 1347 309 257 0 0 chrX 99972761 99972870 -66677426 + (TA)n Simple_repeat Simple_repeat 1 109 0 8 1347 219 333 96 0 chrX 99973208 99973343 -66676953 + MIR3 SINE MIR 46 193 -15 8 1347 208 241 11 88 chrX 99973650 99973741 -66676555 + GA-rich Low_complexity Low_complexity 1 84 0 8 1347 189 0 0 0 chrX 99975041 99975062 -66675234 + (CAA)n Simple_repeat Simple_repeat 3 23 0 8 1347 248 127 0 18 chrX 99975359 99975415 -66674881 + (CAAAA)n Simple_repeat Simple_repeat 5 59 0 8 1347 1570 78 5 0 chrX 99975590 99975796 -66674500 + L1_Mus2 LINE L1 6124 6330 -236 8 1347 316 295 64 14 chrX 99977351 99977492 -66672804 + L1_Rod LINE L1 5661 5808 -39 8 1347 231 157 0 0 chrX 99977550 99977601 -66672695 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1347 652 275 15 45 chrX 99978045 99978062 -66672234 - B3 SINE B2 -19 197 181 8 1347 246 128 0 0 chrX 99978062 99978101 -66672195 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 1347 652 275 15 45 chrX 99978101 99978285 -66672011 - B3 SINE B2 -36 180 2 8 1347 1381 240 67 12 chrX 99978775 99979117 -66671179 - MTE2b LTR MaLR 0 379 19 9 1347 355 157 14 14 chrX 99979425 99979496 -66670800 - URR1B DNA MER1_type 0 225 155 9 1347 346 300 48 91 chrX 99979542 99979751 -66670545 - MT2A LTR ERVL -263 270 71 9 1347 304 324 141 0 chrX 99979650 99979792 -66670504 - MTEa LTR MaLR -200 179 18 9 1347 331 21 42 0 chrX 99979818 99979866 -66670430 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 1347 240 330 156 22 chrX 99980041 99980221 -66670075 - B3 SINE B2 -5 211 8 9 1347 212 86 29 0 chrX 99980221 99980256 -66670040 + (TCTCCC)n Simple_repeat Simple_repeat 1 36 0 9 1347 236 30 30 0 chrX 99980273 99980306 -66669990 + (TC)n Simple_repeat Simple_repeat 1 34 0 9 1347 4120 2 0 0 chrX 99980411 99980858 -66669438 - L1Md_A LINE L1 -1 6581 6135 9 1347 7743 1 0 0 chrX 99980858 99981957 -66668339 + L1Md_A LINE L1 5042 6140 -442 9 1347 592 342 43 49 chrX 99982605 99982955 -66667341 - MTEa LTR MaLR -31 348 1 9 1347 219 69 0 0 chrX 99983603 99983632 -66666664 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 9 1347 1065 117 0 0 chrX 99983635 99983780 -66666516 - B1_Mus2 SINE Alu -1 146 2 9 1347 452 265 15 7 chrX 99984777 99984914 -66665382 + B1F SINE Alu 1 138 -11 9 1347 714 273 19 14 chrX 99984927 99985135 -66665161 + B3 SINE B2 2 210 -6 9 1347 255 169 0 0 chrX 99985337 99985408 -66664888 + (TG)n Simple_repeat Simple_repeat 2 72 0 9 1347 312 225 88 124 chrX 99985438 99985504 -66664792 - B4A SINE B4 -20 272 87 9 1347 850 95 0 8 chrX 99985504 99985631 -66664665 - B1_Mus1 SINE Alu -21 127 2 9 1347 454 286 39 11 chrX 99985632 99985812 -66664484 - B4A SINE B4 -59 233 49 9 1347 523 203 8 31 chrX 99985845 99985972 -66664324 - B1_Mur3 SINE Alu -5 144 21 9 1347 228 258 20 40 chrX 99987558 99987604 -66662692 - RMER17D2 LTR ERVK -277 532 485 9 1347 616 239 222 0 chrX 99987604 99987780 -66662516 - B3 SINE B2 0 216 2 9 1347 228 258 20 40 chrX 99987780 99987931 -66662365 - RMER17D2 LTR ERVK -325 484 339 9 1347 351 60 0 0 chrX 99988290 99988340 -66661956 + (TTA)n Simple_repeat Simple_repeat 2 51 0 9 1347 209 194 0 0 chrX 99988798 99988834 -66661462 + (TGAG)n Simple_repeat Simple_repeat 4 39 0 9 1347 345 256 18 0 chrX 99990324 99990492 -66659804 + GA-rich Low_complexity Low_complexity 1 171 0 9 1347 721 63 16 70 chrX 99990497 99990684 -66659612 + (GGAGA)n Simple_repeat Simple_repeat 4 180 0 9 1347 1425 39 0 0 chrX 99990684 99990864 -66659432 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 9 1347 834 86 0 0 chrX 99990868 99990984 -66659312 + (GGAAA)n Simple_repeat Simple_repeat 5 120 0 9 1347 198 24 45 68 chrX 99995169 99995213 -66655083 + (CAAAC)n Simple_repeat Simple_repeat 2 44 0 9 1347 330 107 0 0 chrX 99996371 99996427 -66653869 + (CAG)n Simple_repeat Simple_repeat 1 56 0 9 1347 396 159 171 0 chrX 99996537 99996625 -66653671 + 5S rRNA rRNA 19 121 0 9 1347 210 154 0 0 chrX 99996625 99996664 -66653632 + A-rich Low_complexity Low_complexity 1 39 0 9 1347 255 231 0 0 chrX 99997806 99997871 -66652425 + A-rich Low_complexity Low_complexity 1 65 0 9 1347 247 121 40 65 chrX 99999840 99999964 -66650332 + T-rich Low_complexity Low_complexity 5 125 0 9 1347 187 179 0 0 chrX 100000577 100000616 -66649680 + MIR SINE MIR 62 100 -108 1 1347 208 268 50 67 chrX 100001000 100001120 -66649176 + MIR3 SINE MIR 83 200 -8 2 1347 201 302 23 78 chrX 100002840 100002969 -66647327 - MIR3 SINE MIR -73 135 14 3 1347 3021 129 10 43 chrX 100002979 100003496 -66646800 - RLTR11A LTR ERVK -28 500 1 4 1347 1954 226 96 4 chrX 100003852 100004331 -66645965 - RCHARR1 DNA MER1_type -101 873 351 5 1347 285 243 157 0 chrX 100004355 100004425 -66645871 + B4 SINE B4 212 292 0 6 1347 1635 236 14 41 chrX 100005289 100005704 -66644592 - MTC-int LTR MaLR -622 636 233 7 1347 3217 184 43 2 chrX 100005745 100006020 -66644276 - Lx6 LINE L1 -421 7039 6765 8 1347 321 26 0 0 chrX 100006020 100006058 -66644238 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 1347 3217 184 43 2 chrX 100006058 100006358 -66643938 - Lx6 LINE L1 -696 6764 6442 8 1347 2635 162 46 32 chrX 100006370 100006931 -66643365 - L1_Mur3 LINE L1 -2814 3066 2498 1 1347 227 172 33 33 chrX 100007335 100007395 -66642901 + T-rich Low_complexity Low_complexity 6 65 0 1 1347 492 172 0 41 chrX 100007714 100007811 -66642485 - RMER13B LTR ERVK -505 403 311 1 168 1579 192 106 31 chrX 100007786 100008244 -66642052 - RMER17B LTR ERVK -519 439 1 1 1348 673 235 30 65 chrX 100009281 100009513 -66640783 - Lx9 LINE L1 -625 7019 6796 1 1348 272 207 147 110 chrX 100009520 100009683 -66640613 + Lx9 LINE L1 7032 7200 -444 1 1348 3084 159 31 9 chrX 100009701 100010273 -66640023 - RMER4B LTR ERVK 0 585 1 1 1348 3613 180 31 46 chrX 100010274 100011050 -66639246 - MurERV4-int LTR ERVK -9 5251 4488 1 1348 589 142 8 38 chrX 100011056 100011188 -66639108 + L1_Mur3 LINE L1 2300 2427 -3453 1 1348 820 241 130 0 chrX 100011188 100011404 -66638892 - L1Md_F LINE L1 -5789 730 487 1 1348 1912 218 43 66 chrX 100011418 100012264 -66638032 + MYSERV16_I-int LTR ERVK 1342 1864 -462 1 1348 830 180 60 19 chrX 100012245 100012477 -66637819 + MYSERV16_I-int LTR ERVK 6306 6495 -55 1 1348 2003 175 11 3 chrX 100012489 100012845 -66637451 + RLTR15 LTR ERVK 1 359 0 1 1348 525 16 0 0 chrX 100012941 100013003 -66637293 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 1348 288 0 0 0 chrX 100013027 100013059 -66637237 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1348 28 71 0 0 chrX 100013260 100013316 -66636980 + AT_rich Low_complexity Low_complexity 1 56 0 2 1348 347 237 9 0 chrX 100013378 100013492 -66636804 + (TA)n Simple_repeat Simple_repeat 1 115 0 2 1348 268 326 96 0 chrX 100013832 100013967 -66636329 + MIR3 SINE MIR 46 193 -15 2 1348 208 241 11 88 chrX 100014274 100014365 -66635931 + GA-rich Low_complexity Low_complexity 1 84 0 2 1348 240 35 0 0 chrX 100015642 100015671 -66634625 + (CAA)n Simple_repeat Simple_repeat 3 31 0 2 1348 182 229 0 59 chrX 100015888 100015939 -66634357 - L2 LINE L2 -1024 2395 2348 2 1348 199 146 0 35 chrX 100015965 100016022 -66634274 + A-rich Low_complexity Low_complexity 5 59 0 2 1348 1666 58 5 0 chrX 100016197 100016403 -66633893 + L1_Mus2 LINE L1 6124 6330 -236 2 1348 447 19 0 0 chrX 100017125 100017177 -66633119 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 1348 226 275 28 28 chrX 100017250 100017321 -66632975 - B4A SINE B4 0 292 222 3 1348 912 199 23 46 chrX 100017326 100017542 -66632754 - B3 SINE B2 -5 211 1 3 1348 512 314 68 56 chrX 100017600 100017938 -66632358 + L1_Rod LINE L1 5467 5808 -39 3 1348 402 57 0 0 chrX 100017994 100018047 -66632249 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1348 390 91 0 0 chrX 100018507 100018562 -66631734 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 1348 583 286 84 0 chrX 100018569 100018723 -66631573 - B3 SINE B2 -49 167 1 3 1348 1461 262 77 9 chrX 100019212 100019562 -66630734 - MTE2b LTR MaLR 0 379 6 3 1348 412 157 14 0 chrX 100019861 100019931 -66630365 - URR1B DNA MER1_type 0 225 155 3 1348 517 330 125 17 chrX 100019939 100020226 -66630070 - MT2A LTR ERVL -197 336 19 3 1348 217 203 46 15 chrX 100020227 100020292 -66630004 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 1348 545 147 9 0 chrX 100020583 100020692 -66629604 + CT-rich Low_complexity Low_complexity 1 110 0 4 1348 1784 56 120 13 chrX 100020792 100021179 -66629117 + RLTR10-int LTR ERVK 5099 5527 -1015 4 1348 4817 105 23 20 chrX 100021191 100021930 -66628366 + RLTR10-int LTR ERVK 1288 1986 -1 4 1348 2049 65 0 0 chrX 100021930 100022191 -66628105 + RLTR10A LTR ERVK 1 261 -150 4 1348 1020 90 8 0 chrX 100022175 100022309 -66627987 + RLTR27 LTR ERVK 175 309 0 4 1348 397 279 22 14 chrX 100022375 100022513 -66627783 + B1F SINE Alu 1 139 -10 4 1348 736 268 19 14 chrX 100022525 100022733 -66627563 + B3 SINE B2 2 210 -6 4 1348 414 0 0 0 chrX 100022930 100022976 -66627320 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1348 873 144 7 7 chrX 100023111 100023258 -66627038 - B1_Mus1 SINE Alu 0 148 2 4 1348 518 258 60 24 chrX 100023268 100023435 -66626861 - B4A SINE B4 -71 221 49 4 1348 617 213 0 24 chrX 100023470 100023595 -66626701 - B1_Mus1 SINE Alu -5 143 22 4 1348 357 255 33 41 chrX 100024419 100024479 -66625817 - RMER17D2 LTR ERVK -264 545 485 4 1348 621 239 222 0 chrX 100024479 100024655 -66625641 - B3 SINE B2 0 216 2 5 1348 357 255 33 41 chrX 100024655 100024839 -66625457 - RMER17D2 LTR ERVK -325 484 303 4 1348 180 125 0 0 chrX 100025189 100025221 -66625075 + (TTA)n Simple_repeat Simple_repeat 2 33 0 5 1348 216 235 103 0 chrX 100025261 100025329 -66624967 - PB1D10 SINE Alu -25 92 18 5 1348 209 194 0 0 chrX 100025674 100025710 -66624586 + (TGAG)n Simple_repeat Simple_repeat 4 39 0 5 1348 387 0 0 0 chrX 100027227 100027270 -66623026 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 5 1348 356 317 18 18 chrX 100027352 100027450 -66622846 + A-rich Low_complexity Low_complexity 4 99 0 5 1348 1137 123 0 0 chrX 100027450 100027629 -66622667 + (GGGGA)n Simple_repeat Simple_repeat 2 180 0 5 1348 356 317 18 18 chrX 100027629 100027697 -66622599 + A-rich Low_complexity Low_complexity 100 169 0 5 1348 1494 33 0 0 chrX 100027697 100027877 -66622419 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 5 1348 612 40 0 0 chrX 100027877 100027952 -66622344 + (GGAAA)n Simple_repeat Simple_repeat 1 75 0 5 1348 189 121 0 0 chrX 100030536 100030569 -66619727 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 6 1348 182 37 37 0 chrX 100032156 100032183 -66618113 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 6 1348 320 330 68 73 chrX 100033218 100033342 -66616954 + L1M2 LINE L1 5173 5289 -854 6 1348 330 107 0 0 chrX 100033342 100033398 -66616898 + (CAG)n Simple_repeat Simple_repeat 1 56 0 6 1348 320 330 68 73 chrX 100033398 100033492 -66616804 + L1M2 LINE L1 5290 5390 -753 6 1348 430 159 171 0 chrX 100033508 100033596 -66616700 + 5S rRNA rRNA 19 121 0 6 1348 21 0 0 0 chrX 100033596 100033617 -66616679 + AT_rich Low_complexity Low_complexity 1 21 0 6 1348 193 245 20 20 chrX 100034537 100034587 -66615709 + MIR SINE MIR 117 166 -96 6 1348 338 298 73 37 chrX 100034870 100035034 -66615262 - L1_Mur3 LINE L1 -265 5615 5446 6 1348 7211 113 52 15 chrX 100035059 100036224 -66614072 - Lx3B LINE L1 -2 6971 5763 6 1348 3376 114 15 64 chrX 100036224 100036479 -66613817 + L1_Mur1 LINE L1 4781 5028 -858 6 1348 3387 36 5 0 chrX 100036479 100036871 -66613425 - MTA_Mm LTR MaLR -2 394 1 7 1348 8834 51 4 17 chrX 100036871 100037984 -66612312 - MTA_Mm-int LTR MaLR 0 1098 1 7 1348 3384 41 5 0 chrX 100037984 100038378 -66611918 - MTA_Mm LTR MaLR 0 396 1 7 1348 3376 114 15 64 chrX 100038378 100038728 -66611568 + L1_Mur1 LINE L1 5029 5356 -530 6 1348 2487 93 14 25 chrX 100038728 100039092 -66611204 + L1_Mus2 LINE L1 6206 6565 -1 7 1348 2560 218 11 163 chrX 100039092 100039436 -66610860 + L1_Mm LINE L1 5354 5582 -301 7 1348 305 302 8 8 chrX 100039979 100040099 -66610197 + GA-rich Low_complexity Low_complexity 3 122 0 7 1348 227 172 33 33 chrX 100040847 100040907 -66609389 + A-rich Low_complexity Low_complexity 6 65 0 7 1348 2656 160 46 32 chrX 100041311 100041872 -66608424 + L1_Mur3 LINE L1 2498 3066 -2814 7 1348 3217 184 43 2 chrX 100041884 100042184 -66608112 + Lx6 LINE L1 6440 6760 -700 7 1348 465 19 0 0 chrX 100042184 100042238 -66608058 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1348 3217 184 43 2 chrX 100042238 100042513 -66607783 + Lx6 LINE L1 6761 7038 -422 7 1348 1635 236 14 41 chrX 100042554 100042969 -66607327 + MTC-int LTR MaLR 233 636 -622 7 1348 285 243 157 0 chrX 100043831 100043901 -66606395 - B4 SINE B4 0 292 212 7 1348 1954 226 96 4 chrX 100043925 100044404 -66605892 + RCHARR1 DNA MER1_type 351 873 -101 8 1348 3021 129 10 43 chrX 100044760 100045277 -66605019 + RLTR11A LTR ERVK 1 500 -28 8 1348 201 302 23 78 chrX 100045287 100045416 -66604880 + MIR3 SINE MIR 14 135 -73 8 1348 208 268 50 67 chrX 100047136 100047256 -66603040 - MIR3 SINE MIR -8 200 83 8 1348 187 179 0 0 chrX 100047640 100047679 -66602617 - MIR SINE MIR -108 100 62 8 1348 351 286 71 41 chrX 100048291 100048488 -66601808 + L1MD LINE L1 3075 3277 -2869 8 1348 228 242 0 0 chrX 100050385 100050447 -66599849 + T-rich Low_complexity Low_complexity 1 62 0 8 1348 193 245 20 20 chrX 100050636 100050686 -66599610 - MIR SINE MIR -96 166 117 8 1348 201 158 0 0 chrX 100051589 100051627 -66598669 + T-rich Low_complexity Low_complexity 1 38 0 8 1348 427 159 171 0 chrX 100051627 100051715 -66598581 - 5S rRNA rRNA 0 121 19 8 1348 320 330 68 73 chrX 100051731 100051825 -66598471 - L1M2 LINE L1 -753 5390 5290 8 1348 330 107 0 0 chrX 100051825 100051881 -66598415 + (CTG)n Simple_repeat Simple_repeat 1 56 0 9 1348 320 330 68 73 chrX 100051881 100052005 -66598291 - L1M2 LINE L1 -854 5289 5173 8 1348 182 37 37 0 chrX 100053040 100053067 -66597229 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 9 1348 1149 66 0 0 chrX 100057266 100057417 -66592879 + (TTTCC)n Simple_repeat Simple_repeat 5 155 0 9 1348 378 0 0 0 chrX 100057420 100057462 -66592834 + (CTCTG)n Simple_repeat Simple_repeat 4 45 0 9 1348 779 0 0 11 chrX 100057462 100057554 -66592742 + (TTCCC)n Simple_repeat Simple_repeat 5 95 0 9 1348 337 128 11 11 chrX 100057554 100057599 -66592697 + polypyrimidine Low_complexity Low_complexity 45 89 0 9 1348 1081 75 6 6 chrX 100057599 100057774 -66592522 + (TCTCC)n Simple_repeat Simple_repeat 3 177 0 9 1348 337 128 11 11 chrX 100057774 100057787 -66592509 + polypyrimidine Low_complexity Low_complexity 31 44 0 9 1348 824 0 0 10 chrX 100057787 100057884 -66592412 + (TTCCC)n Simple_repeat Simple_repeat 5 100 0 9 1348 337 128 11 11 chrX 100057884 100057911 -66592385 + polypyrimidine Low_complexity Low_complexity 4 30 0 9 1348 668 39 9 28 chrX 100057911 100058018 -66592278 + (TCTCC)n Simple_repeat Simple_repeat 3 107 0 1 1348 1134 0 0 0 chrX 100058021 100058147 -66592149 + (TTCCC)n Simple_repeat Simple_repeat 5 130 0 1 1348 334 0 43 0 chrX 100058174 100058220 -66592076 + (TCTCCC)n Simple_repeat Simple_repeat 3 50 0 1 1348 1065 40 11 38 chrX 100058221 100058404 -66591892 + (TCTCC)n Simple_repeat Simple_repeat 1 178 0 1 1348 786 96 36 50 chrX 100058411 100058766 -66591530 + CT-rich Low_complexity Low_complexity 1 350 0 1 1348 807 183 0 16 chrX 100058787 100058970 -66591326 + CT-rich Low_complexity Low_complexity 1 180 0 1 1348 202 204 33 22 chrX 100058963 100059053 -66591243 + C-rich Low_complexity Low_complexity 78 168 0 1 1348 593 214 30 11 chrX 100059063 100059326 -66590970 + CT-rich Low_complexity Low_complexity 1 267 0 1 1348 458 33 17 0 chrX 100059418 100059478 -66590818 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 1348 231 240 13 13 chrX 100059751 100059827 -66590469 + (TTTG)n Simple_repeat Simple_repeat 1 76 0 1 1348 209 194 0 0 chrX 100061003 100061039 -66589257 + (CTCA)n Simple_repeat Simple_repeat 4 39 0 1 1348 24 0 0 0 chrX 100061495 100061519 -66588777 + AT_rich Low_complexity Low_complexity 1 24 0 1 1348 883 109 11 0 chrX 100061888 100062062 -66588234 + (TC)n Simple_repeat Simple_repeat 2 177 0 1 1348 616 239 222 0 chrX 100062062 100062238 -66588058 + B3 SINE B2 2 216 0 1 1348 571 174 8 32 chrX 100064190 100064315 -66585981 + B1_Mus2 SINE Alu 21 142 -5 1 1348 497 275 39 6 chrX 100064348 100064527 -66585769 + B4A SINE B4 49 233 -59 1 1348 831 103 0 8 chrX 100064528 100064655 -66585641 + B1_Mus1 SINE Alu 2 127 -21 1 1348 261 246 77 123 chrX 100064655 100064723 -66585573 + B4A SINE B4 87 272 -20 1 1348 459 82 0 0 chrX 100064753 100064826 -66585470 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 1348 739 268 19 14 chrX 100065029 100065237 -66585059 - B3 SINE B2 -6 210 2 1 1348 442 272 15 7 chrX 100065250 100065387 -66584909 - B1F SINE Alu -11 138 1 1 1348 1000 131 0 0 chrX 100066380 100066525 -66583771 + B1_Mus2 SINE Alu 2 146 -1 1 1348 198 103 0 0 chrX 100066528 100066557 -66583739 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 1348 630 336 43 49 chrX 100067209 100067559 -66582737 + MTEa LTR MaLR 1 348 -31 1 1348 595 154 15 0 chrX 100068307 100068443 -66581853 + GA-rich Low_complexity Low_complexity 1 138 0 1 1348 248 308 192 0 chrX 100068471 100068617 -66581679 + B3 SINE B2 38 211 -5 1 1348 385 19 37 0 chrX 100068792 100068846 -66581450 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1348 268 338 141 0 chrX 100068872 100069014 -66581282 + MTEa LTR MaLR 18 179 -200 1 1348 381 316 33 81 chrX 100068913 100069123 -66581173 + MT2A LTR ERVL 71 270 -263 1 1348 355 157 14 14 chrX 100069169 100069240 -66581056 + URR1B DNA MER1_type 155 225 0 1 1348 1361 249 67 12 chrX 100069549 100069891 -66580405 + MTE2b LTR MaLR 19 379 0 1 1348 681 286 5 11 chrX 100070379 100070566 -66579730 + B3 SINE B2 1 186 -30 1 1348 207 162 0 0 chrX 100070566 100070603 -66579693 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1348 231 157 0 0 chrX 100071066 100071117 -66579179 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1348 645 299 54 52 chrX 100071125 100071516 -66578780 - L1MA6 LINE L1 -369 5931 5467 1 1348 896 203 24 47 chrX 100071575 100071787 -66578509 + B3 SINE B2 1 207 -9 1 1348 411 21 0 0 chrX 100071940 100071988 -66578308 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1348 588 81 30 0 chrX 100072824 100072923 -66577373 + L1_Mus3 LINE L1 6530 6631 -7 1 1348 1624 63 5 0 chrX 100074885 100075091 -66575205 - L1_Mus2 LINE L1 -236 6330 6124 1 1348 241 109 0 35 chrX 100075266 100075323 -66574973 + (TTTTG)n Simple_repeat Simple_repeat 5 59 0 1 1348 208 241 11 88 chrX 100076927 100077018 -66573278 + CT-rich Low_complexity Low_complexity 1 84 0 1 1348 219 333 96 0 chrX 100077325 100077460 -66572836 - MIR3 SINE MIR -15 193 46 1 1348 333 243 0 0 chrX 100077799 100077906 -66572390 + (TA)n Simple_repeat Simple_repeat 2 108 0 1 1348 34 24 0 0 chrX 100077993 100078034 -66572262 + AT_rich Low_complexity Low_complexity 1 41 0 1 1348 1110 252 46 73 chrX 100078326 100078698 -66571598 - ORR1D1 LTR MaLR 0 374 13 1 1348 12771 77 4 3 chrX 100078702 100081088 -66569208 - L1Md_F2 LINE L1 -14 6568 4180 1 1348 4707 145 45 5 chrX 100081086 100082594 -66567702 - L1Md_F2 LINE L1 -4098 1785 238 1 1348 264 59 0 0 chrX 100082822 100082856 -66567440 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1348 3203 200 134 44 chrX 100082966 100083799 -66566497 + RMER13B LTR ERVK 1 908 0 1 1348 2029 277 69 31 chrX 100083967 100084785 -66565511 - Lx9 LINE L1 -273 7371 6346 1 1348 5668 46 0 0 chrX 100084886 100085563 -66564733 + L1Md_F2 LINE L1 5894 6570 -12 1 1348 11966 108 15 54 chrX 100085563 100087572 -66562724 + L1_Mus1 LINE L1 1583 3514 -2369 1 1348 7750 76 1 6 chrX 100087573 100088653 -66561643 + L1_Mus1 LINE L1 5492 6566 -1 1 1348 1020 225 16 39 chrX 100088667 100089030 -66561266 - MYSERV16_I-int LTR ERVK -1227 1099 811 1 1348 2006 264 49 38 chrX 100089040 100089650 -66560646 - MYSERV16_I-int LTR ERVK -1641 685 70 1 1348 324 0 0 0 chrX 100089650 100089686 -66560610 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 1348 2006 255 45 45 chrX 100089686 100089825 -66560471 - MYSERV16_I-int LTR ERVK -2257 69 2 1 1348 565 232 8 53 chrX 100089938 100090070 -66560226 - B1_Mur3 SINE Alu -6 143 18 1 1348 25 0 0 0 chrX 100090101 100090126 -66560170 + AT_rich Low_complexity Low_complexity 1 25 0 1 1348 770 197 115 52 chrX 100090506 100090758 -66559538 - MYSERV6-int LTR ERVK -2285 6674 6407 1 1348 307 289 0 14 chrX 100090862 100090974 -66559322 - B1_Mur4 SINE Alu -40 110 2 1 1348 1087 29 7 7 chrX 100091446 100091586 -66558710 + (TTCC)n Simple_repeat Simple_repeat 4 143 0 1 1348 369 109 0 0 chrX 100091586 100091641 -66558655 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 1348 1942 151 6 11 chrX 100091745 100092101 -66558195 - RLTR15 LTR ERVK 0 359 6 1 1348 448 279 79 0 chrX 100092447 100092587 -66557709 + RLTR42-int LTR ERVK 1109 1259 -4263 1 1348 280 259 23 12 chrX 100092791 100092877 -66557419 + RLTR42-int LTR ERVK 1778 1864 -5542 1 1348 283 143 20 0 chrX 100092901 100092950 -66557346 + RLTR19-int LTR ERVK 1293 1342 -4795 1 1348 4162 172 52 67 chrX 100093011 100093891 -66556405 + RLTR19-int LTR ERVK 2220 3086 -3051 1 1348 242 292 57 66 chrX 100093891 100094118 -66556178 + RMER17C LTR ERVK 118 342 -68 1 1348 243 316 62 25 chrX 100094151 100094199 -66556097 - Lx9 LINE L1 -1185 6459 6407 1 1348 360 0 0 0 chrX 100094199 100094239 -66556057 + (TTG)n Simple_repeat Simple_repeat 3 42 0 1 1348 243 316 62 25 chrX 100094239 100094271 -66556025 - Lx9 LINE L1 -1238 6406 6376 1 1348 702 228 117 71 chrX 100094274 100094557 -66555739 + RMER19A LTR ERVK 1 296 -441 1 1348 2460 215 13 34 chrX 100094577 100095130 -66555166 + ORR1D2-int LTR MaLR 693 1233 -137 1 1348 3370 241 123 25 chrX 100095130 100095829 -66554467 + RMER1A Other Other 19 760 -270 1 1348 495 0 0 0 chrX 100095829 100095884 -66554412 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1 1348 3370 241 123 25 chrX 100095884 100096103 -66554193 + RMER1A Other Other 761 1027 -3 1 1348 575 206 110 0 chrX 100096189 100096325 -66553971 + ORR1D2-int LTR MaLR 1220 1370 0 1 1348 1698 231 19 6 chrX 100096325 100096686 -66553610 + ORR1D2 LTR MaLR 1 366 -4 1 1348 501 17 0 0 chrX 100099195 100099253 -66551043 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 1348 925 319 83 18 chrX 100102464 100102850 -66547446 - Lx8 LINE L1 -173 7300 6890 1 1348 182 62 31 0 chrX 100105417 100105449 -66544847 + (CCCA)n Simple_repeat Simple_repeat 3 35 0 1 1348 1179 76 6 6 chrX 100106003 100106174 -66544122 + B2_Mm2 SINE B2 3 173 -22 1 1348 416 352 11 22 chrX 100106312 100106492 -66543804 - MTEa LTR MaLR -200 179 2 1 1348 1083 235 136 18 chrX 100106604 100106942 -66543354 - MTD LTR MaLR -12 407 30 1 1348 1035 100 0 0 chrX 100107105 100107255 -66543041 + (TC)n Simple_repeat Simple_repeat 2 151 0 1 1348 511 181 361 0 chrX 100107562 100107728 -66542568 + URR1A DNA MER1_type 1 226 0 1 1348 352 228 141 0 chrX 100108003 100108152 -66542144 - L1MA9 LINE L1 -30 6282 6113 1 1348 369 0 0 0 chrX 100108177 100108218 -66542078 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1348 227 321 12 0 chrX 100108694 100108775 -66541521 - ID2 SINE ID 0 83 2 1 1348 884 293 56 30 chrX 100108947 100109448 -66540848 - L1M2 LINE L1 -421 5768 5256 1 1348 1004 197 18 132 chrX 100109960 100110287 -66540009 + ORR1D1 LTR MaLR 85 374 0 1 1348 241 311 58 10 chrX 100110287 100110391 -66539905 - B1F SINE Alu -40 109 1 1 1348 480 59 0 0 chrX 100110512 100110580 -66539716 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 1348 264 280 40 12 chrX 100110722 100110837 -66539459 + PB1D10 SINE Alu 1 120 -29 1 1348 241 258 66 22 chrX 100111016 100111107 -66539189 - L1M2 LINE L1 -882 5261 5167 1 1348 869 253 75 11 chrX 100113273 100113564 -66536732 - Lx2B LINE L1 -45 7013 6625 1 1348 4867 189 25 12 chrX 100113555 100114792 -66535504 + Lx2B LINE L1 5375 6625 -375 1 1348 430 327 6 44 chrX 100114922 100115082 -66535214 - ID_B1 SINE B4 -70 154 1 1 1348 285 346 109 67 chrX 100116431 100116936 -66533360 + MLT1F2 LTR MaLR 13 538 -22 1 1348 183 220 0 0 chrX 100118818 100118868 -66531428 + GA-rich Low_complexity Low_complexity 1 50 0 1 1348 385 340 48 86 chrX 100121508 100121881 -66528415 - MLT1A LTR MaLR -15 359 1 1 1348 456 268 158 5 chrX 100125132 100125316 -66524980 + B3 SINE B2 4 215 -1 1 1348 411 21 0 0 chrX 100130752 100130800 -66519496 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1348 836 121 14 0 chrX 100131991 100132131 -66518165 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 1 1348 312 154 31 0 chrX 100132873 100132938 -66517358 - MER53 DNA hAT -3 190 124 1 1348 515 90 13 0 chrX 100133237 100133315 -66516981 + (CA)n Simple_repeat Simple_repeat 1 79 0 1 1348 274 154 118 44 chrX 100133385 100133453 -66516843 + B1F SINE Alu 68 140 -9 1 1348 267 289 24 0 chrX 100133820 100133903 -66516393 - B1F2 SINE Alu -50 99 15 1 1348 455 310 39 42 chrX 100134402 100134712 -66515584 - L1ME2 LINE L1 -8 6156 5848 1 1348 22 35 0 0 chrX 100137775 100137804 -66512492 + AT_rich Low_complexity Low_complexity 1 29 0 1 1348 216 0 0 0 chrX 100137804 100137828 -66512468 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 1348 2178 201 32 2 chrX 100138006 100138415 -66511881 + MTC LTR MaLR 1 421 0 1 168 2986 179 50 34 chrX 100138419 100139199 -66511097 + RLTR13D3 LTR ERVK 1 1105 -9 2 1349 2445 149 58 4 chrX 100139446 100139897 -66510399 + RLTR21 LTR ERVK 1 475 -1097 2 1349 1319 218 101 37 chrX 100139899 100140452 -66509844 + L1VL2 LINE L1 112 789 -5546 2 1349 10380 73 9 35 chrX 100140453 100141935 -66508361 + L1Md_F2 LINE L1 4143 5585 -298 2 1349 7963 53 8 9 chrX 100141936 100142933 -66507363 + L1Md_F2 LINE L1 5587 6582 0 2 1349 3718 93 32 2 chrX 100142951 100143509 -66506787 + MusHAL1 LINE L1 213 768 -2586 2 1349 663 119 0 17 chrX 100143509 100143629 -66506667 + L1Md_F2 LINE L1 6453 6570 -12 2 1349 1484 147 57 16 chrX 100143629 100143864 -66506432 + MusHAL1 LINE L1 2583 2820 -533 2 1349 6778 237 48 20 chrX 100143864 100145486 -66504810 + MERVK26-int LTR ERVK 3312 4977 -1942 2 1349 1546 87 87 0 chrX 100145491 100145744 -66504552 - RLTR10A LTR ERVK 0 411 137 2 1349 3306 88 7 15 chrX 100145831 100146294 -66504002 - RLTR10-int LTR ERVK -245 1742 1284 2 1349 1631 66 5 0 chrX 100146384 100146581 -66503715 - IAP-d-int LTR ERVK -217 6325 6128 2 1349 757 95 0 0 chrX 100146584 100146689 -66503607 - IAP-d-int LTR ERVK -521 6021 5917 2 1349 2009 59 125 0 chrX 100146732 100147098 -66503198 - IAP-d-int LTR ERVK -1124 5418 5007 2 1349 687 212 40 0 chrX 100147098 100147249 -66503047 - IAP-d-int LTR ERVK -6039 503 347 2 1349 1007 36 0 154 chrX 100147243 100147405 -66502891 - IAP-d-int LTR ERVK -6365 177 41 2 1349 356 292 41 20 chrX 100147407 100147603 -66502693 - IAP-d-int LTR ERVK -6099 443 244 2 1349 1237 110 0 23 chrX 100147686 100147863 -66502433 - RLTR10-int LTR ERVK -1511 476 304 2 1349 1395 92 151 0 chrX 100147865 100148104 -66502192 - RLTR10A LTR ERVK 0 411 137 2 1349 3770 269 70 34 chrX 100148162 100149458 -66500838 + MERVK26-int LTR ERVK 4962 6304 -615 2 1349 369 0 0 0 chrX 100149459 100149500 -66500796 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1349 952 252 340 11 chrX 100149525 100149899 -66500397 + MERVK26-int LTR ERVK 6368 6864 -55 2 1349 422 300 133 39 chrX 100150093 100150402 -66499894 + RMER20B LTR ERVK 147 484 -143 2 1349 581 145 167 52 chrX 100150456 100150630 -66499666 + Lx9 LINE L1 7445 7638 -6 2 1349 792 239 19 42 chrX 100150684 100150898 -66499398 + B3 SINE B2 8 216 0 2 1349 409 290 29 68 chrX 100150976 100151016 -66499280 + L1MD LINE L1 5127 5166 -980 2 1349 2264 49 25 3 chrX 100151016 100151302 -66498994 + L1_Mus1 LINE L1 6276 6567 0 2 1349 409 289 9 98 chrX 100151302 100151603 -66498693 + L1MD LINE L1 5167 5438 -2557 2 1349 2445 165 120 21 chrX 100151642 100152225 -66498071 + RMER6C LTR ERVK 1 641 -49 2 1349 316 256 50 25 chrX 100152758 100152878 -66497418 + MER90 LTR ERV1 203 325 -250 2 1349 727 276 45 35 chrX 100152875 100153074 -66497222 + B3 SINE B2 6 206 -10 2 1349 2251 132 17 14 chrX 100153261 100153623 -66496673 + ORR1B2 LTR MaLR 5 367 0 2 1349 229 257 0 39 chrX 100153714 100153791 -66496505 + GA-rich Low_complexity Low_complexity 1 74 0 2 1349 1382 172 43 17 chrX 100154020 100154321 -66495975 + L1_Mur3 LINE L1 4967 5275 -605 2 1349 382 261 92 0 chrX 100154682 100154835 -66495461 - MER2 DNA MER2_type -141 204 38 2 1349 774 270 83 90 chrX 100154980 100155603 -66494693 - L1M4c LINE L1 -2337 4039 3421 2 1349 1568 182 24 3 chrX 100155633 100155931 -66494365 + Lx5 LINE L1 6726 7029 -21 2 1349 732 202 84 20 chrX 100155996 100156198 -66494098 - MTD-int LTR MaLR -1043 215 1 2 1349 1193 231 74 25 chrX 100156198 100156522 -66493774 - MTD LTR MaLR 0 419 80 2 1349 240 380 0 0 chrX 100157277 100157348 -66492948 - ID SINE ID -150 74 4 2 1349 300 321 57 7 chrX 100157350 100157491 -66492805 - L1M4c LINE L1 -4152 2232 2085 2 1349 23548 58 1 1 chrX 100157569 100161217 -66489079 - L1Md_F2 LINE L1 -5 6577 2931 2 1349 443 195 148 71 chrX 100161492 100161669 -66488627 - RLTR31_Mm LTR ERVK 0 561 368 2 1349 2709 31 3 0 chrX 100161669 100161990 -66488306 + L1Md_F3 LINE L1 6249 6570 -14 2 1349 443 195 148 71 chrX 100161990 100162022 -66488274 - RLTR31_Mm LTR ERVK -194 367 336 2 1349 4635 163 12 32 chrX 100162134 100163051 -66487245 + L1Md_A LINE L1 446 1344 -5380 2 1349 10155 64 0 2 chrX 100165999 100167287 -66483009 + L1Md_F3 LINE L1 4302 5586 -297 2 1349 8269 42 0 1 chrX 100167288 100168270 -66482026 + L1Md_F3 LINE L1 5588 6568 -16 2 1349 1971 103 27 41 chrX 100168290 100168656 -66481640 - RLTR31_Mm LTR ERVK -200 361 1 2 1349 236 304 62 12 chrX 100168657 100168737 -66481559 - ID SINE ID -140 84 1 2 1349 580 284 92 13 chrX 100168740 100168968 -66481328 - MER54A LTR ERVL -559 342 97 2 1349 297 58 58 0 chrX 100169018 100169070 -66481226 + L1Md_F3 LINE L1 6530 6584 0 2 1349 794 295 83 30 chrX 100169070 100169606 -66480690 - L1MC LINE L1 -645 5714 5148 2 1349 1335 297 73 31 chrX 100169678 100170097 -66480199 - L1MA7 LINE L1 -235 6056 5613 2 1349 1157 38 31 25 chrX 100170097 100170259 -66480037 + L1Md_F3 LINE L1 6421 6583 -1 2 1349 1335 308 81 33 chrX 100170259 100170823 -66479473 - L1MA7 LINE L1 -679 5612 4943 2 1349 1064 83 14 0 chrX 100170823 100170967 -66479329 + B1_Mus1 SINE Alu 2 147 -1 2 1349 233 68 83 17 chrX 100170967 100171027 -66479269 + (CAAA)n Simple_repeat Simple_repeat 1 64 0 2 1349 383 306 108 26 chrX 100171151 100171419 -66478877 - L1MA7 LINE L1 -1261 4882 4593 2 1349 1242 108 0 0 chrX 100171513 100171727 -66478569 + (TTCC)n Simple_repeat Simple_repeat 1 214 0 2 1349 1051 280 74 22 chrX 100172218 100172862 -66477434 - L1MC LINE L1 -2313 3833 3128 2 1349 431 206 32 13 chrX 100173527 100173584 -66476712 + polypyrimidine Low_complexity Low_complexity 104 160 0 2 1349 7683 73 23 17 chrX 100173584 100174601 -66475695 - RLTR13D5 LTR ERVK 0 1023 1 2 1349 431 206 32 13 chrX 100174601 100174700 -66475596 + CT-rich Low_complexity Low_complexity 1 103 0 2 1349 729 0 0 0 chrX 100174711 100174792 -66475504 + (TTC)n Simple_repeat Simple_repeat 1 81 0 2 1349 2144 117 3 58 chrX 100174878 100175224 -66475072 - ORR1A2 LTR MaLR 0 327 1 2 1349 3911 188 30 5 chrX 100176002 100176746 -66473550 + Lx2B LINE L1 6239 7000 0 2 1349 925 169 42 42 chrX 100176984 100177176 -66473120 - B2_Mm2 SINE B2 -1 194 3 2 1349 21 0 0 0 chrX 100177906 100177927 -66472369 + AT_rich Low_complexity Low_complexity 1 21 0 2 1349 3847 189 22 62 chrX 100178702 100179535 -66470761 + Lx7 LINE L1 6609 7407 -289 2 1349 948 144 0 0 chrX 100179572 100179718 -66470578 - B1_Mus1 SINE Alu 0 148 3 2 1349 533 187 77 121 chrX 100179719 100179926 -66470370 + Lx7 LINE L1 7397 7594 -102 2 1349 605 78 11 0 chrX 100179926 100179997 -66470299 + (GAAA)n Simple_repeat Simple_repeat 3 74 0 2 1349 1018 84 13 7 chrX 100179997 100180152 -66470144 + (GGAA)n Simple_repeat Simple_repeat 2 157 0 2 1349 605 78 11 0 chrX 100180152 100180170 -66470126 + (GAAA)n Simple_repeat Simple_repeat 3 20 0 2 1349 50 71 0 0 chrX 100180233 100180332 -66469964 + AT_rich Low_complexity Low_complexity 1 99 0 2 1349 206 219 16 0 chrX 100180491 100180555 -66469741 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 1349 294 95 0 0 chrX 100180707 100180749 -66469547 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 2 1349 1399 258 41 19 chrX 100180760 100181080 -66469216 - Lx6 LINE L1 -179 7281 6955 2 1349 376 310 116 19 chrX 100181303 100181510 -66468786 + MER67B LTR ERV1 139 365 -296 2 1349 337 154 163 71 chrX 100181523 100181621 -66468675 + B1_Mur4 SINE Alu 32 138 -11 2 1349 585 0 0 0 chrX 100181621 100181686 -66468610 + (GA)n Simple_repeat Simple_repeat 2 66 0 2 1349 593 301 113 4 chrX 100181710 100181967 -66468329 + MER67B LTR ERV1 354 638 -23 2 1349 2007 112 19 0 chrX 100182192 100182512 -66467784 - IAPEY2_LTR LTR ERVK 0 357 32 2 1349 587 208 19 32 chrX 100182553 100182707 -66467589 + ORR1C2 LTR MaLR 45 196 -188 2 1349 714 245 63 27 chrX 100182705 100182927 -66467369 + ORR1C2 LTR MaLR 155 384 0 2 1349 1655 190 105 33 chrX 100182927 100183356 -66466940 + ORR1C2-int LTR MaLR 1 460 -1049 2 1349 2658 211 43 20 chrX 100183337 100183984 -66466312 + ORR1C2-int LTR MaLR 848 1509 0 2 1349 516 160 0 0 chrX 100184052 100184171 -66466125 + CT-rich Low_complexity Low_complexity 2 120 0 2 1349 313 210 101 157 chrX 100184172 100184190 -66466106 + ORR1C2 LTR MaLR 166 180 -194 2 1349 2462 118 91 10 chrX 100184190 100184576 -66465720 - RLTR9B2 LTR ERVK -3 417 1 2 1349 374 19 57 0 chrX 100184576 100184629 -66465667 + (TCTCTG)n Simple_repeat Simple_repeat 3 58 0 2 1349 484 201 124 79 chrX 100184629 100184807 -66465489 + ORR1C2 LTR MaLR 177 362 -22 2 1349 405 0 0 0 chrX 100185316 100185361 -66464935 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1349 2525 86 5 19 chrX 100185694 100186072 -66464224 + MTA_Mm LTR MaLR 1 373 -23 2 1349 1465 68 0 16 chrX 100186097 100186290 -66464006 - B2_Mm2 SINE B2 -4 191 2 2 1349 3941 175 6 3 chrX 100187318 100188041 -66462255 + L1_Mur3 LINE L1 4761 5485 -395 2 1349 979 288 41 31 chrX 100188172 100188563 -66461733 - MER31A LTR ERV1 -88 397 3 2 1349 361 257 18 54 chrX 100188605 100188716 -66461580 + ID_B1 SINE B4 102 208 -16 2 1349 579 294 118 30 chrX 100188835 100189140 -66461156 - MER31-int LTR ERV1 -40 4896 4565 2 1349 777 261 48 44 chrX 100190950 100191253 -66459043 - ORR1D1 LTR MaLR -5 354 20 2 1349 1660 214 82 10 chrX 100191693 100192084 -66458212 - MTD LTR MaLR 0 419 1 2 1349 2264 250 173 74 chrX 100192086 100193229 -66457067 - MTD-int LTR MaLR -2 1256 1 2 1349 286 263 81 73 chrX 100193229 100193266 -66457030 - MTD LTR MaLR 0 379 341 2 1349 183 42 0 0 chrX 100193266 100193290 -66457006 + (CCAA)n Simple_repeat Simple_repeat 1 24 0 2 1349 291 257 89 81 chrX 100193290 100193388 -66456908 - MTD LTR MaLR -32 387 282 2 1349 848 296 23 4 chrX 100193589 100193847 -66456449 - MTD LTR MaLR -156 263 1 2 1349 396 0 0 0 chrX 100194654 100194698 -66455598 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1349 521 176 72 27 chrX 100195111 100195228 -66455068 + MT2A LTR ERVL 1 118 -415 2 1349 822 116 11 70 chrX 100195239 100195424 -66454872 - Lx LINE L1 -9 6645 6472 2 1349 901 226 172 94 chrX 100195462 100195798 -66454498 + MT2A LTR ERVL 76 464 -69 2 1349 213 39 0 0 chrX 100195798 100195824 -66454472 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 1349 901 226 172 94 chrX 100195824 100195873 -66454423 + MT2A LTR ERVL 465 499 -34 2 1349 315 0 0 0 chrX 100195873 100195908 -66454388 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 2 1349 901 226 172 94 chrX 100195908 100195946 -66454350 + MT2A LTR ERVL 500 533 0 2 1349 1206 219 61 17 chrX 100195946 100196229 -66454067 + ORR1D1 LTR MaLR 79 374 0 2 1349 799 208 75 10 chrX 100197113 100197312 -66452984 - URR1B DNA MER1_type 0 225 14 2 1349 286 325 21 55 chrX 100197630 100197829 -66452467 + L1ME1 LINE L1 5712 5907 -272 2 1349 531 0 0 0 chrX 100197829 100197888 -66452408 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1349 286 325 21 55 chrX 100197888 100197978 -66452318 + L1ME1 LINE L1 5908 5991 -188 2 1349 1064 129 0 11 chrX 100198468 100198648 -66451648 + (TTC)n Simple_repeat Simple_repeat 1 178 0 2 1349 2080 138 22 0 chrX 100198743 100199063 -66451233 - ORR1A2 LTR MaLR 0 327 1 2 1349 575 128 17 0 chrX 100203052 100203169 -66447127 + (GGGA)n Simple_repeat Simple_repeat 2 120 0 2 1349 3341 40 2 10 chrX 100203347 100203746 -66446550 + MTA_Mm LTR MaLR 1 396 0 2 1349 252 0 0 0 chrX 100206190 100206218 -66444078 + (CAA)n Simple_repeat Simple_repeat 3 30 0 2 1349 504 0 0 0 chrX 100207622 100207678 -66442618 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1349 210 105 0 0 chrX 100207678 100207715 -66442581 + (CAGAGA)n Simple_repeat Simple_repeat 5 42 0 2 1349 537 30 0 0 chrX 100207899 100207966 -66442330 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1349 23 68 0 0 chrX 100208382 100208426 -66441870 + GC_rich Low_complexity Low_complexity 1 44 0 2 1349 233 217 0 32 chrX 100208445 100208507 -66441789 + G-rich Low_complexity Low_complexity 4 63 0 2 1349 24 32 0 0 chrX 100208577 100208608 -66441688 + GC_rich Low_complexity Low_complexity 1 31 0 2 1349 548 227 3 21 chrX 100208668 100208960 -66441336 + (CGG)n Simple_repeat Simple_repeat 1 286 0 2 1349 318 268 13 13 chrX 100209837 100209988 -66440308 + C-rich Low_complexity Low_complexity 1 151 0 2 1349 210 261 0 44 chrX 100210012 100210080 -66440216 + C-rich Low_complexity Low_complexity 3 67 0 2 1349 314 313 42 125 chrX 100210432 100210841 -66439455 - L1ME4a LINE L1 -213 5911 5537 2 1349 336 107 0 0 chrX 100210916 100210931 -66439365 + (TC)n Simple_repeat Simple_repeat 1 15 0 2 1349 792 0 0 0 chrX 100210931 100211019 -66439277 + (TCTCC)n Simple_repeat Simple_repeat 3 90 0 2 1349 336 107 0 0 chrX 100211019 100211059 -66439237 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 1349 24 32 0 0 chrX 100212000 100212031 -66438265 + AT_rich Low_complexity Low_complexity 1 31 0 3 1349 22 0 0 0 chrX 100212101 100212123 -66438173 + AT_rich Low_complexity Low_complexity 1 22 0 3 1349 1081 166 102 5 chrX 100212507 100212713 -66437583 + URR1A DNA MER1_type 1 226 0 3 1349 360 297 9 0 chrX 100213357 100213468 -66436828 + PB1D10 SINE Alu 1 112 -5 3 1349 315 279 161 15 chrX 100213580 100213915 -66436381 - L1M4 LINE L1 -1505 4641 4258 3 1349 745 237 38 3 chrX 100214024 100214335 -66435961 + Lx9 LINE L1 7288 7641 -3 3 1349 405 0 0 0 chrX 100214386 100214431 -66435865 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1349 947 254 108 38 chrX 100214479 100215235 -66435061 + L1M3 LINE L1 4789 5604 -687 3 1349 374 286 76 73 chrX 100215241 100215516 -66434780 + L1_Rod LINE L1 20 295 -6877 3 1349 4862 210 57 35 chrX 100215523 100217248 -66433048 + L1_Rod LINE L1 3964 5153 -694 3 1349 714 122 24 0 chrX 100217249 100217372 -66432924 + ORR1A2 LTR MaLR 1 126 -201 3 1349 1398 127 0 9 chrX 100217362 100217584 -66432712 - ORR1A2 LTR MaLR -102 225 6 3 1349 295 270 34 0 chrX 100217997 100218086 -66432210 + Lx2B LINE L1 6872 6963 -37 3 1349 889 114 0 20 chrX 100218087 100218239 -66432057 + (GAAA)n Simple_repeat Simple_repeat 1 149 0 3 1349 286 228 119 0 chrX 100218316 100218417 -66431879 + Lx5 LINE L1 6938 7050 0 3 1349 1453 295 46 40 chrX 100218561 100219359 -66430937 + L1M2 LINE L1 4597 5399 -744 3 1349 26 0 0 0 chrX 100219382 100219408 -66430888 + AT_rich Low_complexity Low_complexity 1 26 0 3 1349 756 120 21 0 chrX 100219444 100219586 -66430710 - Lx3C LINE L1 -2 6974 6830 3 1349 576 88 12 0 chrX 100219586 100219666 -66430630 - Lx3C LINE L1 -677 6299 6219 3 1349 1846 82 32 0 chrX 100219663 100219945 -66430351 - L1_Mur1 LINE L1 -2580 3306 3016 3 1349 2354 122 35 50 chrX 100219985 100220538 -66429758 - RMER17A LTR ERVK -22 787 1 3 1349 7211 77 22 37 chrX 100220539 100221617 -66428679 - RMER17A-int LTR ERVK -1 1727 666 3 1349 2675 106 20 56 chrX 100221623 100222072 -66428224 - RMER17A-int LTR ERVK -1286 442 10 3 1349 4053 128 19 68 chrX 100222081 100222871 -66427425 - RMER17A LTR ERVK 0 751 1 3 1349 10374 135 26 13 chrX 100222871 100225093 -66425203 - L1_Mur1 LINE L1 -2864 3022 771 3 1349 1425 77 0 6 chrX 100225184 100225366 -66424930 - B2_Mm2 SINE B2 -13 182 2 3 1349 234 315 43 0 chrX 100225367 100225459 -66424837 + L1M2 LINE L1 5391 5486 -814 3 1349 340 257 64 45 chrX 100225540 100225650 -66424646 + L1_Rod LINE L1 529 640 -6968 3 1349 2057 237 47 34 chrX 100225941 100226535 -66423761 + L1_Rod LINE L1 753 1354 -6254 3 1349 35354 73 3 1 chrX 100226580 100232853 -66417443 - L1Md_F2 LINE L1 -1 6581 301 3 1349 517 88 38 0 chrX 100232872 100232952 -66417344 - ORR1C2 LTR MaLR 0 378 296 3 1349 1104 148 143 0 chrX 100233793 100234002 -66416294 + MERVL_2A-int LTR ERVL 886 1124 -4637 3 1349 1339 201 72 34 chrX 100234022 100234342 -66415954 - ORR1C2 LTR MaLR -52 332 1 3 1349 451 231 29 22 chrX 100234349 100234486 -66415810 + L1_Rod LINE L1 1393 1530 -4317 3 1349 2527 159 58 72 chrX 100234481 100235036 -66415260 - L1_Mur3 LINE L1 -1025 4855 4309 3 1349 9403 86 12 20 chrX 100235041 100236466 -66413830 + MusHAL1 LINE L1 780 2192 -520 3 1349 1991 139 0 28 chrX 100237171 100237533 -66412763 + L1_Mur2 LINE L1 3387 3738 -2139 3 1349 8386 48 2 2 chrX 100237536 100238558 -66411738 - L1Md_F2 LINE L1 -1 6581 5587 3 1349 3026 81 5 12 chrX 100238576 100238977 -66411319 + MTB LTR MaLR 1 398 -2 3 1349 7383 138 6 2 chrX 100238982 100240175 -66410121 + L1_Mur2 LINE L1 3735 4932 -945 3 1349 26 64 0 0 chrX 100240365 100240412 -66409884 + AT_rich Low_complexity Low_complexity 1 47 0 3 1349 7087 127 14 34 chrX 100240669 100242407 -66407889 + L1Md_F LINE L1 584 2298 -3585 3 1349 5707 83 36 6 chrX 100242402 100243657 -66406639 - L1VL4 LINE L1 -2071 1488 194 3 1349 651 307 41 7 chrX 100243761 100244113 -66406183 - L1MA4 LINE L1 -275 6022 5663 3 1349 2005 123 119 52 chrX 100244125 100244570 -66405726 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1349 6463 59 13 10 chrX 100244570 100245396 -66404900 - IAPEz-int LTR ERVK 0 6481 5653 3 1349 2664 82 0 3 chrX 100245391 100245734 -66404562 - IAPEz-int LTR ERVK -4781 1700 1359 3 1349 3470 73 0 16 chrX 100245734 100246270 -66404026 - IAPEz-int LTR ERVK -5819 662 211 3 1349 1402 148 84 41 chrX 100246270 100246767 -66403529 - IAPEz-int LTR ERVK -6052 429 3 3 1349 1975 121 114 92 chrX 100246769 100247234 -66403062 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1349 259 194 97 0 chrX 100247236 100247298 -66402998 - ERVL-B4-int LTR ERVL -5482 232 165 3 1349 264 271 72 62 chrX 100247417 100247515 -66402781 - L1MD3 LINE L1 -14 7981 7883 3 1349 938 268 64 48 chrX 100247515 100247888 -66402408 - MTE2b LTR MaLR 0 379 1 3 1349 264 271 72 62 chrX 100247888 100247982 -66402314 - L1MD3 LINE L1 -113 7882 7788 3 1349 717 152 0 0 chrX 100248052 100248164 -66402132 - L1VL4 LINE L1 -5997 305 194 3 1349 570 295 136 40 chrX 100248176 100248529 -66401767 - L1MD3 LINE L1 -261 7734 7348 3 1349 10078 88 1 6 chrX 100248609 100250738 -66399558 - L1_Mus2 LINE L1 -1 6653 4455 3 1349 1889 85 4 4 chrX 100250737 100250998 -66399298 + MusHAL1 LINE L1 536 796 -1916 3 1349 667 264 82 0 chrX 100251481 100251701 -66398595 - L1_Mur3 LINE L1 -1962 3918 3681 3 1349 589 299 0 19 chrX 100251705 100251862 -66398434 - RSINE1 SINE B4 -4 161 8 3 1349 772 260 27 12 chrX 100251868 100252125 -66398171 - L1_Mur3 LINE L1 -2157 3723 3463 3 1349 429 208 33 8 chrX 100252133 100252254 -66398042 - Lx8 LINE L1 -1 7472 7349 3 1349 365 20 0 0 chrX 100252253 100252302 -66397994 + L1_Mus1 LINE L1 6519 6567 0 3 1349 246 317 48 9 chrX 100252337 100252442 -66397854 - Lx8 LINE L1 -140 7333 7225 3 1349 239 253 25 0 chrX 100252476 100252555 -66397741 - L1_Mur3 LINE L1 -2451 3426 3346 3 1349 602 183 0 0 chrX 100252668 100252772 -66397524 - RLTR20D LTR ERVK 0 568 465 3 1349 378 86 17 0 chrX 100252790 100252848 -66397448 + HAL1-3A_ME LINE L1 1976 2034 -824 3 1349 389 192 8 60 chrX 100252879 100252989 -66397307 - RLTR20D LTR ERVK -80 488 371 3 1349 423 214 31 3 chrX 100253036 100253138 -66397158 + RMER4A LTR ERVK 346 437 -29 3 1349 1146 160 74 34 chrX 100253138 100253436 -66396860 + MYSERV6-int LTR ERVK 7776 8085 -874 3 1349 2267 117 84 0 chrX 100253440 100253783 -66396513 - L1VL2 LINE L1 -5641 694 323 3 1349 1026 204 41 15 chrX 100253773 100254042 -66396254 - L1_Rod LINE L1 -4343 1504 1229 3 1349 2301 164 0 22 chrX 100254043 100254460 -66395836 - MTC LTR MaLR -8 413 6 3 1349 1995 178 27 0 chrX 100254466 100254832 -66395464 - L1_Rod LINE L1 -6373 1235 860 3 1349 834 268 53 11 chrX 100255292 100255575 -66394721 - L1_Rod LINE L1 -6750 858 564 3 1349 1091 71 29 0 chrX 100255690 100255830 -66394466 + B1_Mus1 SINE Alu 5 148 0 3 1349 1408 264 68 0 chrX 100255875 100256257 -66394039 + ERVL-int LTR ERVL 2958 3365 -2392 3 1349 382 291 182 6 chrX 100256280 100256439 -66393857 + ERVL-int LTR ERVL 3380 3566 -2148 3 1349 1162 88 0 0 chrX 100256620 100256768 -66393528 + B1_Mus1 SINE Alu 1 148 0 3 1349 252 127 0 154 chrX 100257395 100257440 -66392856 + B1_Mur4 SINE Alu 1 42 -108 3 1349 240 111 0 0 chrX 100257440 100257476 -66392820 + (CAGAGA)n Simple_repeat Simple_repeat 1 36 0 3 1349 252 127 0 154 chrX 100257476 100257495 -66392801 + B1_Mur4 SINE Alu 43 55 -95 3 1349 468 139 0 81 chrX 100257503 100257652 -66392644 + (CAGAGA)n Simple_repeat Simple_repeat 2 138 0 3 1349 441 238 0 0 chrX 100257652 100257753 -66392543 + (CAGG)n Simple_repeat Simple_repeat 3 103 0 3 1349 386 99 0 139 chrX 100257753 100257940 -66392356 + (CAGAGA)n Simple_repeat Simple_repeat 2 162 0 3 1349 559 106 46 46 chrX 100257950 100258059 -66392237 + B1_Mur4 SINE Alu 41 149 -1 3 1349 23 0 0 0 chrX 100258528 100258551 -66391745 + AT_rich Low_complexity Low_complexity 1 23 0 3 1349 21 0 0 0 chrX 100260186 100260207 -66390089 + AT_rich Low_complexity Low_complexity 1 21 0 3 1349 336 107 0 0 chrX 100260538 100260578 -66389718 + (GA)n Simple_repeat Simple_repeat 2 41 0 3 1349 927 0 0 0 chrX 100260578 100260681 -66389615 + (GGAGA)n Simple_repeat Simple_repeat 3 105 0 3 1349 336 107 0 0 chrX 100260681 100260696 -66389600 + (GA)n Simple_repeat Simple_repeat 2 16 0 3 1349 286 316 42 125 chrX 100260771 100261180 -66389116 + L1ME4a LINE L1 5537 5911 -213 3 1349 210 261 0 44 chrX 100261532 100261600 -66388696 + G-rich Low_complexity Low_complexity 3 67 0 3 1349 318 268 13 13 chrX 100261624 100261775 -66388521 + G-rich Low_complexity Low_complexity 1 151 0 3 1349 548 227 3 21 chrX 100262652 100262944 -66387352 + (CCG)n Simple_repeat Simple_repeat 1 286 0 3 1349 24 32 0 0 chrX 100263004 100263035 -66387261 + GC_rich Low_complexity Low_complexity 1 31 0 3 1349 233 217 0 32 chrX 100263105 100263167 -66387129 + C-rich Low_complexity Low_complexity 4 63 0 3 1349 23 68 0 0 chrX 100263186 100263230 -66387066 + GC_rich Low_complexity Low_complexity 1 44 0 3 1349 504 45 0 0 chrX 100263646 100263713 -66386583 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 1349 210 105 0 0 chrX 100263897 100263935 -66386361 + (TCTCTG)n Simple_repeat Simple_repeat 5 42 0 3 1349 450 0 0 0 chrX 100263935 100263984 -66386312 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1349 189 94 0 0 chrX 100265084 100265116 -66385180 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1349 225 0 0 0 chrX 100265386 100265411 -66384885 + (TTG)n Simple_repeat Simple_repeat 3 27 0 3 1349 3341 40 2 10 chrX 100267855 100268254 -66382042 - MTA_Mm LTR MaLR 0 396 1 3 1349 810 119 0 0 chrX 100268432 100268575 -66381721 + (TCCC)n Simple_repeat Simple_repeat 2 144 0 3 1350 2056 141 22 0 chrX 100272563 100272883 -66377413 + ORR1A2 LTR MaLR 1 327 0 3 1350 423 0 0 0 chrX 100272978 100273025 -66377271 + (GAA)n Simple_repeat Simple_repeat 1 47 0 3 1350 1059 131 0 0 chrX 100273025 100273122 -66377174 + (GGA)n Simple_repeat Simple_repeat 3 99 0 3 1350 1167 117 0 0 chrX 100273122 100273302 -66376994 + (GAA)n Simple_repeat Simple_repeat 1 180 0 3 1350 1059 131 0 0 chrX 100273302 100273380 -66376916 + (GGA)n Simple_repeat Simple_repeat 1 78 0 3 1350 286 328 51 69 chrX 100273739 100273955 -66376341 - L1ME1 LINE L1 -30 6134 5908 3 1350 477 0 0 0 chrX 100273955 100274008 -66376288 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1350 286 328 44 66 chrX 100274008 100274369 -66375927 - L1ME1 LINE L1 -257 5907 5561 3 1350 838 189 81 10 chrX 100274524 100274722 -66375574 + URR1B DNA MER1_type 14 225 0 3 1350 1181 226 61 17 chrX 100275611 100275894 -66374402 - ORR1D1 LTR MaLR 0 374 79 3 1350 900 231 169 94 chrX 100275894 100275933 -66374363 - MT2A LTR ERVL 0 533 500 3 1350 387 0 0 0 chrX 100275933 100275976 -66374320 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 3 1350 900 231 169 94 chrX 100275976 100276025 -66374271 - MT2A LTR ERVL -34 499 465 3 1350 720 0 0 0 chrX 100276025 100276105 -66374191 + (GA)n Simple_repeat Simple_repeat 1 80 0 3 1350 900 231 169 94 chrX 100276105 100276441 -66373855 - MT2A LTR ERVL -69 464 76 3 1350 824 111 16 71 chrX 100276479 100276663 -66373633 + Lx LINE L1 6472 6645 -9 3 1350 521 176 72 27 chrX 100276674 100276791 -66373505 - MT2A LTR ERVL -415 118 1 3 1350 540 30 0 0 chrX 100277208 100277274 -66373022 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 1350 965 281 27 8 chrX 100278078 100278336 -66371960 + MTD LTR MaLR 1 263 -156 3 1350 329 263 83 58 chrX 100278537 100278633 -66371663 + MTD LTR MaLR 282 384 -35 3 1350 468 0 0 0 chrX 100278633 100278685 -66371611 + (TTGG)n Simple_repeat Simple_repeat 1 52 0 3 1350 329 266 83 58 chrX 100278685 100278722 -66371574 + MTD LTR MaLR 340 405 -14 3 1350 2653 255 170 72 chrX 100278722 100279866 -66370430 + MTD-int LTR MaLR 1 1256 -2 3 1350 1813 212 82 10 chrX 100279868 100280259 -66370037 + MTD LTR MaLR 1 419 0 3 1350 844 261 48 44 chrX 100280699 100281002 -66369294 + ORR1D1 LTR MaLR 20 354 -5 3 1350 600 294 118 30 chrX 100282813 100283118 -66367178 + MER31-int LTR ERV1 4565 4896 -40 3 1350 396 287 16 50 chrX 100283237 100283358 -66366938 - ID_B1 SINE B4 -16 208 92 3 1350 1141 283 43 36 chrX 100283390 100283782 -66366514 + MER31A LTR ERV1 3 397 -88 3 1350 3886 194 5 1 chrX 100283894 100284636 -66365660 - L1_Mur3 LINE L1 -375 5505 4761 4 1350 1543 65 0 5 chrX 100285725 100285910 -66364386 + B2_Mm2 SINE B2 2 185 -10 4 1350 2576 105 8 23 chrX 100285924 100286323 -66363973 - MTA_Mm LTR MaLR -3 393 1 4 1350 462 18 0 0 chrX 100286656 100286711 -66363585 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1350 740 160 103 79 chrX 100287160 100287363 -66362933 - ORR1C2 LTR MaLR 0 384 177 4 1350 290 24 48 0 chrX 100287363 100287405 -66362891 + (CAGAGA)n Simple_repeat Simple_repeat 3 46 0 4 1350 2602 113 93 10 chrX 100287405 100287790 -66362506 + RLTR9B2 LTR ERVK 1 417 -3 4 1350 774 150 0 0 chrX 100287799 100287966 -66362330 + (GA)n Simple_repeat Simple_repeat 2 168 0 4 1350 2575 211 83 21 chrX 100288034 100288657 -66361639 - ORR1C2-int LTR MaLR 0 1509 848 4 1350 1793 188 105 35 chrX 100288638 100289068 -66361228 - ORR1C2-int LTR MaLR -1049 460 1 4 1350 798 241 74 71 chrX 100289068 100289440 -66360856 - ORR1C2 LTR MaLR 0 394 45 4 1350 2289 104 83 0 chrX 100289471 100289798 -66360498 + IAPEY2_LTR LTR ERVK 1 354 -3 4 1350 9280 123 17 8 chrX 100289801 100291207 -66359089 + IAPEY3-int LTR ERVK 1 1419 -6261 4 1350 5757 122 11 18 chrX 100291187 100292080 -66358216 + IAPEy-int LTR ERVK 6627 7513 0 4 1350 2190 103 19 0 chrX 100292091 100292410 -66357886 + IAPEY2_LTR LTR ERVK 33 357 0 4 1350 593 305 112 8 chrX 100292631 100292889 -66357407 - MER67B LTR ERV1 -20 641 357 4 1350 243 306 43 77 chrX 100292905 100292923 -66357373 - B4 SINE B4 -63 229 216 4 1350 531 0 0 0 chrX 100292923 100292982 -66357314 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 1350 243 306 43 77 chrX 100292982 100293080 -66357216 - B4 SINE B4 -77 215 117 4 1350 420 315 116 19 chrX 100293093 100293300 -66356996 - MER67B LTR ERV1 -296 365 139 4 1350 1304 263 47 19 chrX 100293523 100293841 -66356455 + Lx6 LINE L1 6955 7281 -179 4 1350 441 81 0 0 chrX 100293853 100293915 -66356381 + (TGAA)n Simple_repeat Simple_repeat 3 64 0 4 1350 192 261 0 0 chrX 100294074 100294139 -66356157 + (TATATG)n Simple_repeat Simple_repeat 6 70 0 4 1350 52 17 0 0 chrX 100294293 100294352 -66355944 + AT_rich Low_complexity Low_complexity 1 59 0 4 1350 426 196 0 0 chrX 100294456 100294568 -66355728 + CT-rich Low_complexity Low_complexity 2 113 0 4 1350 3903 202 43 106 chrX 100294568 100294759 -66355537 - Lx7 LINE L1 -102 7594 7408 4 1350 959 158 0 0 chrX 100294759 100294905 -66355391 + B1_Mus1 SINE Alu 3 148 0 4 1350 3903 202 43 106 chrX 100294905 100295765 -66354531 - Lx7 LINE L1 -289 7407 6609 4 1350 37433 65 4 5 chrX 100295787 100301957 -66348339 - L1Md_F3 LINE L1 0 6584 422 4 1350 21 0 0 0 chrX 100302457 100302478 -66347818 + AT_rich Low_complexity Low_complexity 1 21 0 4 1350 1033 217 5 33 chrX 100302923 100303133 -66347163 + ORR1D1 LTR MaLR 2 205 -169 4 1350 364 279 92 33 chrX 100303242 100303351 -66346945 + ORR1D1 LTR MaLR 224 342 -42 4 1350 2510 147 29 5 chrX 100303351 100303735 -66346561 - ORR1B1 LTR MaLR -1 393 1 4 1350 364 226 21 11 chrX 100303735 100303777 -66346519 + ORR1D1 LTR MaLR 333 374 0 4 1350 2187 121 26 62 chrX 100304495 100304883 -66345413 - RLTR30 LTR ERV1 -5 374 1 4 1350 897 290 118 63 chrX 100304984 100305395 -66344901 - Lx9 LINE L1 0 7644 7197 4 1350 1162 109 0 0 chrX 100305395 100305542 -66344754 - B1_Mus1 SINE Alu -1 147 1 4 1350 897 295 104 60 chrX 100305542 100305720 -66344576 - Lx9 LINE L1 -448 7196 6881 4 1350 781 227 33 33 chrX 100305720 100305972 -66344324 - MT2A LTR ERVL 0 533 242 4 1350 371 149 15 3 chrX 100305970 100306042 -66344254 - MT2A LTR ERVL -404 71 1 4 1350 1295 282 57 14 chrX 100306048 100306397 -66343899 - Lx9 LINE L1 -611 7033 6670 4 1350 7071 76 39 2 chrX 100306421 100307422 -66342874 - L1_Mus2 LINE L1 -1 6565 5528 4 1350 4300 87 57 0 chrX 100307417 100308027 -66342269 - MusHAL1 LINE L1 -683 2029 1385 4 1350 1193 213 94 34 chrX 100308030 100308327 -66341969 + RLTR46 LTR ERVK 1 315 -5 4 1350 434 244 41 69 chrX 100308336 100308481 -66341815 + IAPEY3-int LTR ERVK 3 143 -7537 4 1350 3598 256 42 25 chrX 100308532 100309485 -66340811 + IAPEY3-int LTR ERVK 535 1503 -6177 4 1350 360 158 0 0 chrX 100309507 100309564 -66340732 + MMERVK10C-int LTR ERVK 447 503 -6039 4 1350 410 127 32 0 chrX 100309564 100309627 -66340669 + MMERVK10C-int LTR ERVK 5007 5071 -1471 4 1350 1987 67 0 0 chrX 100309621 100309861 -66340435 + MMERVK10C-int LTR ERVK 5460 5699 -1882 4 1350 2376 163 17 2 chrX 100309879 100310363 -66339933 + MMERVK10C-int LTR ERVK 6849 7364 -149 4 1350 2704 47 0 0 chrX 100310362 100310679 -66339617 + RLTR10-int LTR ERVK 1483 1799 -188 4 1350 788 99 0 0 chrX 100310694 100310805 -66339491 + MMERVK10C-int LTR ERVK 7471 7581 0 4 1350 1164 211 101 40 chrX 100310805 100311102 -66339194 + RLTR46 LTR ERVK 1 315 -5 4 1350 9349 146 47 8 chrX 100311111 100313317 -66336979 - L1Md_F LINE L1 -3296 2587 326 4 1350 838 341 102 39 chrX 100313340 100313764 -66336532 + Lx9 LINE L1 5709 6162 -1311 4 1350 1459 81 5 31 chrX 100313764 100313955 -66336341 + B2_Mm2 SINE B2 2 187 -8 4 1350 1076 295 45 7 chrX 100313955 100314269 -66336027 + Lx9 LINE L1 6163 6636 -1008 4 1350 522 0 0 0 chrX 100314907 100314965 -66335331 + (GTTTG)n Simple_repeat Simple_repeat 2 59 0 4 1350 1285 42 0 0 chrX 100314965 100315104 -66335192 - B1_Mus1 SINE Alu -3 145 7 4 1350 36940 44 9 0 chrX 100315553 100320808 -66329488 + L1Md_T LINE L1 284 5586 -297 4 1350 8840 39 1 0 chrX 100320808 100321818 -66328478 + L1Md_T LINE L1 5587 6582 0 4 1350 841 189 31 25 chrX 100321820 100321983 -66328313 + MTD LTR MaLR 200 363 -56 4 1350 707 308 80 47 chrX 100322358 100322634 -66327662 - B4A SINE B4 -7 285 1 4 1350 621 228 94 0 chrX 100322693 100322864 -66327432 + Lx9 LINE L1 7265 7451 -193 4 1350 432 123 0 0 chrX 100322875 100322948 -66327348 + (TA)n Simple_repeat Simple_repeat 2 74 0 4 1350 441 145 103 0 chrX 100322948 100323065 -66327231 + Lx9 LINE L1 7515 7643 -1 4 1350 2614 189 42 38 chrX 100323213 100323513 -66326783 + L1_Mur3 LINE L1 1759 2049 -3828 4 1350 387 0 0 0 chrX 100323513 100323556 -66326740 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1350 2614 213 50 49 chrX 100323556 100324060 -66326236 + L1_Mur3 LINE L1 2050 2533 -3344 4 1350 423 0 0 0 chrX 100324146 100324193 -66326103 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1350 445 132 96 0 chrX 100324662 100324745 -66325551 + RMER6D LTR ERVK 2 92 -628 4 1350 36075 62 16 13 chrX 100324745 100330088 -66320208 + L1Md_F3 LINE L1 236 5586 -297 4 1350 8173 55 15 0 chrX 100330089 100331071 -66319225 + L1Md_F3 LINE L1 5588 6584 0 4 1350 306 146 18 0 chrX 100331095 100331150 -66319146 + RLTR19-int LTR ERVK 4145 4200 -1937 4 1350 392 231 16 0 chrX 100331150 100331235 -66319061 - URR1A DNA MER1_type -138 88 1 4 1350 733 238 46 102 chrX 100331338 100331661 -66318635 - MTC-int LTR MaLR -44 1214 910 4 1350 348 206 98 2 chrX 100331656 100331737 -66318559 - MTC-int LTR MaLR -718 540 466 4 1350 438 199 68 74 chrX 100331737 100331900 -66318396 - RLTR19-int LTR ERVK -4989 1148 987 4 1350 306 232 0 14 chrX 100332056 100332126 -66318170 - RLTR19-int LTR ERVK -5160 977 909 4 1350 518 143 24 0 chrX 100332365 100332449 -66317847 + MT2B LTR ERVL 3 88 -445 4 1350 4763 193 110 27 chrX 100332469 100333365 -66316931 - Lx5 LINE L1 -3 7047 6107 4 1350 504 0 0 0 chrX 100333365 100333421 -66316875 + (TC)n Simple_repeat Simple_repeat 1 56 0 4 1350 4763 161 132 7 chrX 100333421 100334109 -66316187 - Lx5 LINE L1 -944 6106 5303 4 1350 1052 103 0 0 chrX 100334109 100334265 -66316031 + B2_Mm2 SINE B2 2 157 -38 4 1350 426 39 0 0 chrX 100334265 100334317 -66315979 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 4 1350 9090 48 3 3 chrX 100334339 100336126 -66314170 - L1Md_F2 LINE L1 0 6582 4796 4 1350 15398 126 18 37 chrX 100336694 100337446 -66312850 - Lx5 LINE L1 -571 5306 4582 4 1350 2629 72 0 0 chrX 100337446 100337780 -66312516 + L1_Mus1 LINE L1 6234 6567 0 4 1350 15398 126 18 37 chrX 100337780 100338751 -66311545 - Lx5 LINE L1 -1296 4581 3623 4 1350 1597 160 70 22 chrX 100338751 100339065 -66311231 - ORR1A4 LTR MaLR 0 329 1 4 1350 15398 126 18 37 chrX 100339065 100339990 -66310306 - Lx5 LINE L1 -2255 3622 2706 4 1350 348 24 0 0 chrX 100339990 100340031 -66310265 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1350 2246 141 39 7 chrX 100340096 100340531 -66309765 - Lx5 LINE L1 -5742 1344 896 4 1350 813 242 107 30 chrX 100341027 100341371 -66308925 + MT2B LTR ERVL 77 582 -19 4 1350 2237 168 39 7 chrX 100341420 100341857 -66308439 - MTC-int LTR MaLR -806 452 2 4 1350 1992 185 30 35 chrX 100341860 100342264 -66308032 - MTC LTR MaLR -4 417 16 4 1350 297 0 0 0 chrX 100342463 100342496 -66307800 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 4 1350 575 62 12 0 chrX 100342497 100342577 -66307719 + (TTCC)n Simple_repeat Simple_repeat 4 84 0 4 1350 4986 94 33 7 chrX 100342593 100343299 -66306997 - Lx3C LINE L1 -7 6969 6246 4 1350 851 155 20 0 chrX 100343301 100343449 -66306847 + Lx3B LINE L1 6064 6214 -759 4 1350 378 0 0 0 chrX 100344512 100344554 -66305742 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1350 3779 239 28 143 chrX 100344755 100346248 -66304048 + RMER1C Other Other 22 1342 0 4 1350 631 268 180 37 chrX 100346380 100346702 -66303594 - RLTR9A LTR ERVK 0 368 1 4 1350 1166 234 68 41 chrX 100346827 100347192 -66303104 + MTC-int LTR MaLR 171 545 -713 4 1350 703 259 131 23 chrX 100347198 100347419 -66302877 + MTC-int LTR MaLR 745 989 -269 4 1350 11589 94 41 14 chrX 100348502 100349451 -66300845 - L1_Mur2 LINE L1 -2835 3042 2049 4 1350 207 69 0 0 chrX 100349451 100349480 -66300816 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 4 1350 11589 105 38 10 chrX 100349480 100351073 -66299223 - L1_Mur2 LINE L1 -3829 2048 425 4 1350 802 216 119 23 chrX 100351079 100351339 -66298957 - L1_Rod LINE L1 -4226 1621 1337 4 1350 1256 175 16 81 chrX 100351993 100352316 -66297980 - L1_Rod LINE L1 -6263 1345 1044 4 1350 1131 234 5 0 chrX 100352773 100352987 -66297309 + RMER1C Other Other 28 242 -1100 4 1350 305 337 0 40 chrX 100353185 100353284 -66297012 + RMER1C Other Other 34 128 -1214 4 1350 3810 261 51 36 chrX 100353327 100353974 -66296322 + RMER1C Other Other 369 987 -355 4 1350 612 40 0 0 chrX 100353974 100354049 -66296247 + (GA)n Simple_repeat Simple_repeat 2 76 0 4 1350 3810 261 51 36 chrX 100354049 100354361 -66295935 + RMER1C Other Other 988 1341 -1 4 1350 1116 276 6 56 chrX 100354367 100354708 -66295588 - L1_Rod LINE L1 -6543 1065 742 4 1350 4201 113 68 169 chrX 100354739 100355131 -66295165 + RMER17A2 LTR ERVK 1 339 -567 4 1350 387 0 0 0 chrX 100355131 100355174 -66295122 + (TC)n Simple_repeat Simple_repeat 1 43 0 4 1350 4201 113 68 169 chrX 100355174 100355788 -66294508 + RMER17A2 LTR ERVK 340 906 0 4 1350 353 316 73 55 chrX 100355835 100356053 -66294243 - L1_Rod LINE L1 -6860 748 527 4 1350 245 343 57 47 chrX 100356067 100356367 -66293929 - L1_Rod LINE L1 -6860 748 446 4 1350 762 271 14 57 chrX 100356371 100356651 -66293645 - MTD LTR MaLR -142 279 1 4 1350 334 271 20 20 chrX 100356811 100356948 -66293348 + L1M3 LINE L1 3608 3744 -2402 4 1350 3103 181 18 15 chrX 100357217 100357766 -66292530 + Lx6 LINE L1 6906 7456 -4 4 1350 563 270 94 30 chrX 100357797 100358169 -66292127 + L1M3 LINE L1 4135 4545 -1598 4 1350 492 198 0 10 chrX 100359814 100359911 -66290385 + L1M5 LINE L1 4038 4133 -2013 4 1350 246 265 13 32 chrX 100360487 100360643 -66289653 + (CCG)n Simple_repeat Simple_repeat 1 153 0 4 1350 26 0 0 0 chrX 100360856 100360882 -66289414 + GC_rich Low_complexity Low_complexity 1 26 0 4 1350 236 231 22 11 chrX 100360914 100361006 -66289290 + L1M3 LINE L1 4536 4628 -1512 4 1350 1169 136 11 0 chrX 100361010 100361186 -66289110 + B2_Mm1t SINE B2 2 179 -14 4 1350 258 215 40 0 chrX 100361220 100361297 -66288999 + B2_Mm2 SINE B2 39 121 -95 4 1350 188 35 35 0 chrX 100361299 100361328 -66288968 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 4 1350 1379 87 38 0 chrX 100361363 100361546 -66288750 + B2_Mm2 SINE B2 5 194 -1 4 1350 9286 105 27 11 chrX 100361553 100363747 -66286549 + L1Md_F2 LINE L1 217 2470 -3413 4 1350 9692 29 0 1 chrX 100363747 100364869 -66285427 + L1Md_T LINE L1 4466 5586 -297 4 1350 8782 24 0 2 chrX 100364870 100365867 -66284429 + L1Md_T LINE L1 5588 6582 0 4 1350 24004 70 2 1 chrX 100365867 100368990 -66281306 + L1Md_F2 LINE L1 2461 5586 -297 4 1350 7817 64 1 15 chrX 100368990 100370000 -66280296 + L1Md_F2 LINE L1 5587 6582 0 4 1350 1063 103 7 0 chrX 100370020 100370165 -66280131 + B1_Mm SINE Alu 2 147 0 4 1350 364 235 201 39 chrX 100370178 100370382 -66279914 + L1M3 LINE L1 4617 4853 -1287 4 1350 342 0 0 0 chrX 100370391 100370429 -66279867 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 4 1350 284 88 0 28 chrX 100370444 100370500 -66279796 - B2_Mm2 SINE B2 -107 109 57 4 1350 1204 91 22 17 chrX 100370536 100370714 -66279582 - B2_Mm1t SINE B2 -13 180 2 4 1350 898 259 69 67 chrX 100371372 100371438 -66278858 + MTD LTR MaLR 1 70 -349 4 1350 1793 105 27 66 chrX 100371438 100371773 -66278523 + RLTRETN_Mm LTR ERVK 1 322 0 4 1350 898 259 69 67 chrX 100371773 100372124 -66278172 + MTD LTR MaLR 71 419 0 4 1350 367 287 26 17 chrX 100372124 100372241 -66278055 + MTD-int LTR MaLR 1 118 -1140 4 1350 1284 242 207 65 chrX 100372357 100373037 -66277259 + MTD-int LTR MaLR 366 1142 -116 4 1350 506 191 32 0 chrX 100373045 100373139 -66277157 + B3 SINE B2 1 97 -119 4 1350 511 284 157 5 chrX 100373392 100373583 -66276713 + MTD LTR MaLR 106 325 -94 4 1350 2353 129 26 57 chrX 100375019 100375405 -66274891 - ORR1C1 LTR MaLR 0 378 5 4 1350 1199 275 72 9 chrX 100375536 100375884 -66274412 + ORR1D2 LTR MaLR 1 370 0 5 1350 513 0 0 0 chrX 100376248 100376305 -66273991 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1350 1048 164 18 22 chrX 100376420 100376644 -66273652 - Lx5 LINE L1 -875 6175 5953 5 1350 1038 172 246 0 chrX 100376642 100376886 -66273410 + Lx5 LINE L1 6747 7050 0 5 1350 649 241 102 6 chrX 100376938 100377105 -66273191 - B3A SINE B2 -15 183 1 5 1350 556 264 7 14 chrX 100377542 100377684 -66272612 - RSINE1 SINE B4 -21 144 4 5 1350 435 322 74 25 chrX 100377685 100377968 -66272328 + MER90a LTR ERV1 290 586 -28 5 1350 474 265 21 35 chrX 100378169 100378310 -66271986 - ID_B1 SINE B4 -7 217 79 5 1350 29 28 0 0 chrX 100379414 100379450 -66270846 + AT_rich Low_complexity Low_complexity 1 36 0 5 1350 225 254 0 0 chrX 100380984 100381055 -66269241 + (CAT)n Simple_repeat Simple_repeat 3 73 0 5 1350 420 211 107 27 chrX 100382711 100382823 -66267473 + ID_B1 SINE B4 102 222 -2 5 1350 306 343 65 7 chrX 100383034 100383172 -66267124 + RSINE1 SINE B4 3 148 -17 5 1350 448 263 333 7 chrX 100383221 100383416 -66266880 + L1M3 LINE L1 5387 5643 -528 5 1350 604 114 8 8 chrX 100383416 100383548 -66266748 + (TAGA)n Simple_repeat Simple_repeat 4 135 0 5 1350 448 238 68 18 chrX 100383548 100383637 -66266659 + L1M3 LINE L1 5644 5739 -432 5 1350 785 256 34 0 chrX 100383638 100383814 -66266482 + B3 SINE B2 6 187 -29 5 1350 459 0 0 0 chrX 100383816 100383867 -66266429 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 1350 1196 61 0 0 chrX 100384064 100384211 -66266085 + B1_Mus1 SINE Alu 2 148 0 5 1350 1437 73 11 0 chrX 100384608 100384799 -66265497 + B2_Mm1a SINE B2 1 193 0 5 1350 313 255 75 0 chrX 100384805 100384899 -66265397 + MTD LTR MaLR 264 364 -55 5 1350 1055 258 153 34 chrX 100384904 100385321 -66264975 + Lx9 LINE L1 7006 7472 -172 5 1350 267 269 130 19 chrX 100385548 100385793 -66264503 - L1M4b LINE L1 -4943 1961 1633 5 1350 4225 184 193 9 chrX 100386411 100387436 -66262860 + L1_Mur3 LINE L1 4414 5627 -253 5 1350 3904 45 0 6 chrX 100387437 100387952 -66262344 + MURVY-LTR LTR ERV1 1 512 -7 5 1350 4484 261 65 90 chrX 100387979 100388741 -66261555 + MuRRS4-int LTR ERV1 3 801 -6755 5 1350 180 156 0 135 chrX 100388741 100388793 -66261503 + MIRc SINE MIR 36 80 -188 5 1350 4484 261 65 90 chrX 100388793 100390708 -66259588 + MuRRS4-int LTR ERV1 802 2813 -4743 5 1350 7312 290 18 16 chrX 100390708 100392825 -66257471 + MuRRS4-int LTR ERV1 2152 4272 -791 5 1350 297 51 0 0 chrX 100393062 100393101 -66257195 + RLTR6-int LTR ERV1 7740 7778 0 5 1350 3582 33 53 198 chrX 100393101 100393708 -66256588 + MURVY-LTR LTR ERV1 1 519 0 5 1350 6982 112 8 10 chrX 100393710 100394721 -66255575 + Lx LINE L1 5632 6640 -14 5 1350 21 0 0 0 chrX 100394745 100394766 -66255530 + AT_rich Low_complexity Low_complexity 1 21 0 5 1350 3162 107 63 6 chrX 100394766 100395272 -66255024 - RLTR19B LTR ERVK -178 537 3 5 1350 4518 233 105 84 chrX 100395274 100395946 -66254350 - MYSERV16_I-int LTR ERVK -347 1979 1316 5 1350 1337 14 0 0 chrX 100395946 100396091 -66254205 - B1_Mm SINE Alu -2 145 1 5 1350 4518 237 103 83 chrX 100396091 100397437 -66252859 - MYSERV16_I-int LTR ERVK -1011 1315 1 5 1350 2247 100 51 3 chrX 100397482 100397794 -66252502 + ORR1A2 LTR MaLR 1 327 0 5 1350 3401 156 41 7 chrX 100397794 100398441 -66251855 + ORR1A2-int LTR MaLR 1 918 -1045 5 1350 509 209 36 48 chrX 100398615 100398781 -66251515 + RLTR43A LTR ERVK 201 364 0 5 1350 260 216 74 86 chrX 100398967 100399048 -66251248 + ETnERV2-int LTR ERVK 190 269 -7948 5 1350 27 0 0 0 chrX 100399095 100399122 -66251174 + AT_rich Low_complexity Low_complexity 1 27 0 5 1350 2456 152 126 35 chrX 100399397 100399915 -66250381 + ETnERV2-int LTR ERVK 255 819 -4587 5 1350 5542 174 18 48 chrX 100399917 100400979 -66249317 + ETnERV2-int LTR ERVK 1721 2750 -4656 5 168 2795 193 15 29 chrX 100400974 100401566 -66248730 + RMER16-int LTR ERVK 2256 2839 -2567 5 1351 2218 240 54 20 chrX 100401588 100402282 -66248014 + RMER16-int LTR ERVK 4083 4534 -2872 5 1351 225 211 0 0 chrX 100402310 100402348 -66247948 - RLTR13D3 LTR ERVK -1076 38 1 5 1351 1265 221 4 0 chrX 100402349 100402580 -66247716 + RMER16-int LTR ERVK 5127 5358 -2048 5 1351 1450 77 11 6 chrX 100402616 100402799 -66247497 - B2_Mm1t SINE B2 -8 185 2 5 1351 2489 185 5 0 chrX 100402802 100403245 -66247051 + RMER16-int LTR ERVK 5350 5794 -1612 5 1351 991 161 69 0 chrX 100403290 100403464 -66246832 + RMER16-int LTR ERVK 3791 3976 -1430 5 1351 296 338 20 13 chrX 100404357 100404372 -66245924 + MMERGLN-int LTR ERV1 7072 7218 -334 5 1351 508 290 0 0 chrX 100404372 100404503 -66245793 + RMER16-int LTR ERVK 6489 6619 -300 5 1351 1211 65 0 0 chrX 100404727 100404865 -66245431 + B1_Mm SINE Alu 1 138 -9 5 1351 240 100 0 0 chrX 100404875 100404915 -66245381 + (A)n Simple_repeat Simple_repeat 1 40 0 5 1351 2042 206 24 17 chrX 100404982 100405396 -66244900 + RMER16-int LTR ERVK 6646 7062 -344 5 1351 500 229 37 43 chrX 100405586 100405750 -66244546 + RLTR43A LTR ERVK 202 364 0 5 1351 941 86 12 68 chrX 100405750 100405880 -66244416 + ORR1A2-int LTR MaLR 932 1052 -911 5 1351 7649 84 28 0 chrX 100405880 100407008 -66243288 + L1_Mus3 LINE L1 5479 6637 -1 5 1351 6257 106 21 7 chrX 100407015 100407933 -66242363 + ORR1A2-int LTR MaLR 1033 1963 0 5 1351 2459 99 9 9 chrX 100407933 100408260 -66242036 + ORR1A2 LTR MaLR 1 327 0 5 1351 25 51 0 0 chrX 100408315 100408354 -66241942 + AT_rich Low_complexity Low_complexity 1 39 0 5 1351 315 284 21 74 chrX 100408354 100408449 -66241847 - B1_Mur1 SINE Alu -42 107 18 5 1351 1227 116 131 0 chrX 100409005 100409204 -66241092 + MT2B LTR ERVL 367 591 -10 5 1351 814 273 44 24 chrX 100409377 100409625 -66240671 - RLTR11A2 LTR ERVK -267 260 8 5 1351 1143 255 117 15 chrX 100409643 100410121 -66240175 + L1MB2 LINE L1 5643 6169 -2 5 1351 918 187 205 0 chrX 100410131 100410302 -66239994 + B3 SINE B2 1 206 -10 5 1351 580 101 0 0 chrX 100410322 100410411 -66239885 + L1_Mus3 LINE L1 6547 6635 -3 5 1351 441 0 0 0 chrX 100410928 100410977 -66239319 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1351 1238 163 47 79 chrX 100410985 100411023 -66239273 - B2_Mm2 SINE B2 -15 183 159 5 1351 302 0 0 26 chrX 100411023 100411062 -66239234 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 5 1351 1238 77 12 0 chrX 100411062 100411216 -66239080 - B2_Mm2 SINE B2 -37 158 3 5 1351 296 308 41 0 chrX 100411225 100411371 -66238925 - L1M4 LINE L1 -1379 4767 4616 5 1351 1730 268 110 26 chrX 100411468 100412130 -66238166 + L1_Mur3 LINE L1 307 1024 -6704 5 1351 533 238 71 144 chrX 100412455 100412534 -66237762 + L1_Mur3 LINE L1 876 939 -6789 5 1351 1481 75 11 5 chrX 100412534 100412722 -66237574 + B2_Mm1t SINE B2 2 190 -3 5 1351 533 238 71 144 chrX 100412722 100412903 -66237393 + L1_Mur3 LINE L1 940 1106 -6622 5 1351 1421 85 21 0 chrX 100412903 100413092 -66237204 - B2_Mm1t SINE B2 0 193 1 5 1351 533 238 71 144 chrX 100413092 100413267 -66237029 + L1_Mur3 LINE L1 1107 1280 -6448 5 1351 1814 152 62 9 chrX 100413282 100413620 -66236676 - ORR1B1 LTR MaLR -38 356 1 5 1351 4342 238 39 19 chrX 100413621 100414921 -66235375 - MurERV4-int LTR ERVK -3425 1835 415 5 1351 312 277 0 0 chrX 100415141 100415224 -66235072 - MurERV4-int LTR ERVK -5140 120 38 5 1351 2035 116 53 0 chrX 100415403 100415705 -66234591 + ORR1A3 LTR MaLR 7 324 -2 5 1351 261 83 0 0 chrX 100415750 100415786 -66234510 + (T)n Simple_repeat Simple_repeat 1 36 0 5 1351 1244 42 0 0 chrX 100415787 100415931 -66234365 - B1_Mus2 SINE Alu -3 144 1 5 1351 1273 166 66 12 chrX 100416110 100416230 -66234066 + L1_Mur3 LINE L1 2520 2636 -3244 5 1351 234 0 0 0 chrX 100416230 100416256 -66234040 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1351 1273 166 66 12 chrX 100416256 100416379 -66233917 + L1_Mur3 LINE L1 2637 2775 -3105 5 1351 2358 183 41 8 chrX 100416378 100416862 -66233434 + Lx2B LINE L1 5643 6142 -858 5 1351 6344 121 47 28 chrX 100416891 100417922 -66232374 + MYSERV6-int LTR ERVK 6710 7759 -1200 5 1351 2626 161 33 16 chrX 100417930 100418383 -66231913 + RMER6B LTR ERVK 1 461 0 5 1351 2048 62 4 0 chrX 100418468 100418727 -66231569 + ORR1A2 LTR MaLR 68 327 0 5 1351 463 182 144 50 chrX 100418739 100418878 -66231418 + L1_Rod LINE L1 5148 5299 -548 5 1351 234 67 0 0 chrX 100418881 100418911 -66231385 + L1_Rod LINE L1 5467 5496 -351 5 1351 5171 222 111 53 chrX 100418909 100420063 -66230233 + Lx9 LINE L1 5971 7222 -422 5 1351 1200 82 0 7 chrX 100420063 100420211 -66230085 + B1_Mm SINE Alu 1 147 0 5 1351 5171 222 111 53 chrX 100420211 100420546 -66229750 + Lx9 LINE L1 7223 7546 -98 5 1351 516 273 44 44 chrX 100420938 100421164 -66229132 + L1MD1 LINE L1 5576 5801 -558 5 1351 1945 177 71 27 chrX 100421187 100421553 -66228743 - ORR1C2 LTR MaLR -2 382 1 5 1351 290 248 154 0 chrX 100421593 100421710 -66228586 + L1MD1 LINE L1 6094 6228 -14 5 1351 1507 277 31 3 chrX 100421729 100422084 -66228212 + MTE2a LTR MaLR 7 371 -8 5 1351 1111 301 76 25 chrX 100422117 100422710 -66227586 + L1MD2 LINE L1 5645 6267 -92 5 1351 995 152 16 52 chrX 100422723 100422917 -66227379 - B2_Mm2 SINE B2 -8 187 1 5 1351 4285 92 71 5 chrX 100425699 100426277 -66224019 + Lx LINE L1 6038 6653 -1 5 1351 207 312 72 56 chrX 100426302 100426482 -66223814 + L2 LINE L2 2377 2559 -860 5 1351 528 213 37 0 chrX 100426483 100426619 -66223677 + Lx5 LINE L1 6910 7050 0 5 1351 28 0 0 0 chrX 100426723 100426751 -66223545 + AT_rich Low_complexity Low_complexity 1 28 0 5 1351 280 387 66 66 chrX 100426810 100427128 -66223168 + L2 LINE L2 2757 3074 -345 5 1351 225 216 13 51 chrX 100428386 100428464 -66221832 + CT-rich Low_complexity Low_complexity 2 76 0 5 1351 711 210 79 7 chrX 100428526 100428665 -66221631 - B1_Mur4 SINE Alu 0 150 2 5 1351 289 256 5 89 chrX 100428666 100428759 -66221537 + ORR1E LTR MaLR 3 90 -289 5 1351 376 318 30 124 chrX 100428853 100429119 -66221177 + ORR1E LTR MaLR 109 349 -10 5 1351 1284 88 10 57 chrX 100429862 100430055 -66220241 - B2_Mm1t SINE B2 -7 186 3 5 1351 1110 71 43 0 chrX 100430170 100430311 -66219985 + B1_Mus1 SINE Alu 1 147 -1 5 1351 906 189 0 0 chrX 100430312 100430492 -66219804 + A-rich Low_complexity Low_complexity 1 180 0 5 1351 376 309 155 32 chrX 100430561 100430999 -66219297 + Lx7 LINE L1 347 838 -6890 5 1351 3079 244 48 137 chrX 100432141 100433591 -66216705 + RMER1A Other Other 16 1030 0 5 1351 17547 176 92 29 chrX 100433589 100434449 -66215847 + Lx7 LINE L1 1610 2507 -3373 5 1351 1445 78 21 5 chrX 100434449 100434641 -66215655 + B2_Mm2 SINE B2 1 195 0 5 1351 17547 176 92 29 chrX 100434641 100436234 -66214062 + Lx7 LINE L1 2508 4282 -1598 5 1351 1187 75 0 7 chrX 100436234 100436382 -66213914 + B1_Mus1 SINE Alu 2 148 0 5 1351 17547 176 92 29 chrX 100436382 100437181 -66213115 + Lx7 LINE L1 4283 5130 -750 5 1351 1557 53 5 21 chrX 100437181 100437372 -66212924 + B2_Mm1t SINE B2 2 189 -4 5 1351 17547 176 92 29 chrX 100437372 100437634 -66212662 + Lx7 LINE L1 5131 5394 -486 5 1351 1469 90 5 0 chrX 100437634 100437823 -66212473 + B2_Mm1t SINE B2 1 190 -3 5 1351 17547 183 74 21 chrX 100437823 100439294 -66211002 + Lx7 LINE L1 5395 6921 -775 5 1351 198 0 0 0 chrX 100439420 100439442 -66210854 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1351 1297 41 0 13 chrX 100439442 100439591 -66210705 - B1_Mus1 SINE Alu 0 148 2 5 1351 225 125 0 0 chrX 100439717 100439749 -66210547 + Lx LINE L1 3905 3936 -1947 5 1351 1697 43 0 0 chrX 100439750 100439938 -66210358 + B2_Mm1t SINE B2 1 188 -5 5 1351 1489 70 11 11 chrX 100439948 100440135 -66210161 + B2_Mm1t SINE B2 2 188 -5 5 1351 8361 151 30 167 chrX 100440135 100441447 -66208849 + Lx LINE L1 3920 4745 -1138 5 1351 1384 109 5 0 chrX 100441447 100441631 -66208665 + B2_Mm1t SINE B2 2 186 -7 5 1351 8361 114 31 15 chrX 100441631 100443489 -66206807 + Lx LINE L1 4746 6648 -6 5 1351 1201 114 44 22 chrX 100443576 100443756 -66206540 + B2_Mm2 SINE B2 2 185 -10 5 1351 356 217 0 0 chrX 100444008 100444077 -66206219 + RLTR42-int LTR ERVK 1900 1968 -3554 6 1351 701 193 98 11 chrX 100444077 100444260 -66206036 + RLTR42-int LTR ERVK 1929 2127 -3395 6 1351 291 235 59 0 chrX 100444245 100444313 -66205983 + RLTR42-int LTR ERVK 2329 2400 -3737 6 1351 216 0 0 0 chrX 100444342 100444366 -66205930 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 6 1351 1190 76 0 19 chrX 100444367 100444528 -66205768 - B2_Mm2 SINE B2 -37 158 1 6 1351 277 164 218 0 chrX 100444528 100444583 -66205713 + MYSERV-int LTR ERVK 5637 5703 -847 6 1351 657 262 84 35 chrX 100444583 100444920 -66205376 + RLTR42-int LTR ERVK 2530 2871 -3266 6 1351 451 290 67 98 chrX 100445024 100445377 -66204919 + RLTR19-int LTR ERVK 2905 3190 -2947 6 1351 1504 65 5 21 chrX 100445387 100445576 -66204720 + B2_Mm1t SINE B2 2 187 -6 6 1351 242 68 45 0 chrX 100445872 100445916 -66204380 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 6 1351 281 26 26 0 chrX 100445941 100445979 -66204317 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 6 1351 1055 109 0 0 chrX 100445989 100446127 -66204169 - B1_Mus1 SINE Alu -9 139 2 6 1351 593 205 51 43 chrX 100446174 100446312 -66203984 + RLTR23 LTR ERV1 1 139 -291 6 1351 403 262 88 75 chrX 100448139 100448366 -66201930 + RMER10A LTR ERVL 195 424 -18 6 1351 1794 211 163 37 chrX 100448372 100449002 -66201294 + Lx7 LINE L1 6914 7690 -6 6 1351 1191 82 7 0 chrX 100449002 100449148 -66201148 + B1_Mus1 SINE Alu 1 147 -1 6 1351 784 106 35 0 chrX 100449167 100449280 -66201016 + B1_Mus1 SINE Alu 2 118 -30 6 1351 265 242 228 31 chrX 100449291 100449453 -66200843 + Lx7 LINE L1 7572 7695 -1 6 1351 1377 84 45 0 chrX 100449455 100449633 -66200663 - B2_Mm2 SINE B2 -9 186 1 6 1351 286 221 0 0 chrX 100449641 100449714 -66200582 - Lx2B LINE L1 -5 6995 6932 6 1351 1240 62 7 0 chrX 100450064 100450210 -66200086 + B1_Mus1 SINE Alu 2 148 0 6 1351 399 293 44 49 chrX 100450472 100450655 -66199641 + RLTR23 LTR ERV1 247 428 -2 6 1351 275 265 235 0 chrX 100450682 100450750 -66199546 - RSINE1 SINE B4 -48 117 34 6 1351 472 59 0 29 chrX 100450983 100451053 -66199243 - B1_Mur4 SINE Alu 0 150 83 6 1351 262 260 0 61 chrX 100450988 100451070 -66199226 - ID_B1 SINE B4 -5 219 143 6 1351 1543 358 86 72 chrX 100452254 100452734 -66197562 - MLT-int LTR MaLR -277 1458 944 6 1351 1681 42 21 0 chrX 100452734 100452925 -66197371 + B2_Mm2 SINE B2 1 195 0 6 1351 1543 358 86 72 chrX 100452925 100453401 -66196895 - MLT-int LTR MaLR -792 943 490 6 1351 1857 232 102 5 chrX 100453514 100453955 -66196341 + Lx8 LINE L1 6584 7067 -406 6 1351 1715 122 27 57 chrX 100454157 100454488 -66195808 - MYSERV6-int LTR ERVK 0 8959 8639 6 1351 1290 227 73 84 chrX 100454488 100454844 -66195452 + ORR1D1 LTR MaLR 15 366 -8 6 1351 371 160 0 39 chrX 100455452 100455530 -66194766 + L1_Mur1 LINE L1 5388 5462 -424 6 1351 315 135 0 55 chrX 100455703 100455758 -66194538 + RLTR42-int LTR ERVK 1048 1099 -4423 6 1351 1052 101 45 45 chrX 100456038 100456215 -66194081 + B2_Mm2 SINE B2 2 178 -17 6 1351 538 277 71 97 chrX 100456304 100456427 -66193869 + RLTR42-int LTR ERVK 1101 1212 -4310 6 1351 207 0 0 0 chrX 100456427 100456450 -66193846 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 6 1351 1225 63 0 0 chrX 100456452 100456594 -66193702 - B1_Mus1 SINE Alu -6 142 1 6 1351 538 277 71 97 chrX 100456594 100456775 -66193521 + RLTR42-int LTR ERVK 1213 1400 -4122 6 1351 1315 128 32 0 chrX 100456782 100456969 -66193327 + B2_Mm1t SINE B2 1 193 0 6 1351 326 368 32 37 chrX 100458110 100458519 -66191777 + MER52-int LTR ERV1 4834 5240 -1851 6 1351 1214 95 0 0 chrX 100458804 100458952 -66191344 + B1_Mus1 SINE Alu 1 148 0 6 1351 198 0 0 0 chrX 100458955 100458977 -66191319 + (CAAAA)n Simple_repeat Simple_repeat 5 26 0 6 1351 491 324 62 29 chrX 100459091 100459399 -66190897 + MER52-int LTR ERV1 5656 5973 -1118 6 1351 1298 35 7 0 chrX 100459565 100459710 -66190586 + B1_Mm SINE Alu 2 147 0 6 1351 309 159 0 0 chrX 100459711 100459774 -66190522 + A-rich Low_complexity Low_complexity 1 63 0 6 1351 198 91 0 0 chrX 100460099 100460132 -66190164 + (A)n Simple_repeat Simple_repeat 1 33 0 6 1351 1025 95 73 0 chrX 100460207 100460344 -66189952 - B1_Mm SINE Alu 0 147 1 6 1351 1169 94 0 0 chrX 100460980 100461139 -66189157 + L1_Mus2 LINE L1 6408 6566 0 6 1351 1250 83 0 11 chrX 100461147 100461329 -66188967 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 6 1351 1712 115 56 18 chrX 100462190 100462474 -66187822 - ORR1B2 LTR MaLR -8 359 65 6 1351 234 0 0 0 chrX 100462482 100462508 -66187788 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1351 1043 67 7 0 chrX 100462508 100462643 -66187653 - B1_Mm SINE Alu 0 147 12 6 1351 454 191 0 2 chrX 100462655 100462744 -66187552 - ORR1B2-int LTR MaLR -39 1541 1435 6 1351 2209 119 3 0 chrX 100462744 100463062 -66187234 + ORR1A2 LTR MaLR 1 319 -8 6 1351 238 188 0 94 chrX 100463339 100463355 -66186941 + B2_Mm1a SINE B2 114 126 -67 6 1351 1274 145 16 0 chrX 100463355 100463541 -66186755 - B2_Mm2 SINE B2 -6 189 1 6 1351 238 188 0 94 chrX 100463541 100463577 -66186719 + B2_Mm1a SINE B2 127 161 -32 6 1351 263 122 0 0 chrX 100463544 100463585 -66186711 + B2_Mm2 SINE B2 128 168 -27 6 1351 575 181 11 99 chrX 100463552 100463708 -66186588 - ORR1B2 LTR MaLR -169 215 52 6 1351 317 282 69 82 chrX 100464065 100464297 -66185999 + RLTR14 LTR ERV1 154 382 0 6 1351 1319 20 0 13 chrX 100465031 100465180 -66185116 + B1_Mus2 SINE Alu 1 147 0 6 1351 1400 110 21 0 chrX 100465438 100465629 -66184667 + B2_Mm2 SINE B2 1 195 0 6 1351 258 32 0 0 chrX 100465767 100465798 -66184498 + (TCC)n Simple_repeat Simple_repeat 3 33 0 6 1351 1098 228 150 88 chrX 100465944 100465992 -66184304 + L1_Mur2 LINE L1 1612 1659 -4227 6 1351 432 0 0 0 chrX 100465992 100466040 -66184256 + (TAA)n Simple_repeat Simple_repeat 3 50 0 6 1351 1098 228 150 88 chrX 100466040 100466401 -66183895 + L1_Mur2 LINE L1 1660 2070 -3816 6 1351 1202 75 0 20 chrX 100466401 100466551 -66183745 + B1_Mus2 SINE Alu 1 147 0 6 1351 1098 228 150 88 chrX 100466551 100466660 -66183636 + L1_Mur2 LINE L1 2071 2162 -3724 6 1351 284 125 0 0 chrX 100466664 100466704 -66183592 + B1_Mur4 SINE Alu 5 44 -106 6 1351 2959 154 84 5 chrX 100466709 100467085 -66183211 + L1_Mur2 LINE L1 4344 4759 -1118 6 1351 1316 92 35 66 chrX 100467085 100467125 -66183171 + B2_Mm2 SINE B2 1 40 -155 6 1351 1778 26 0 0 chrX 100467125 100467316 -66182980 + B2_Mm1a SINE B2 1 191 -2 6 1351 1316 92 35 66 chrX 100467316 100467472 -66182824 + B2_Mm2 SINE B2 41 191 -4 6 1351 2959 154 84 5 chrX 100467472 100467651 -66182645 + L1_Mur2 LINE L1 4760 4943 -934 6 1351 242 235 0 0 chrX 100467664 100467715 -66182581 - ORR1D2-int LTR MaLR -1008 362 312 6 1351 253 135 0 39 chrX 100467721 100467798 -66182498 + T-rich Low_complexity Low_complexity 2 75 0 6 1351 714 131 52 44 chrX 100467803 100467939 -66182357 - B1_Mur4 SINE Alu 0 150 14 6 1351 370 239 67 107 chrX 100467806 100467956 -66182340 - B4 SINE B4 -69 223 80 6 1351 1592 200 13 6 chrX 100467967 100468279 -66182017 - ORR1D2-int LTR MaLR -1054 316 3 6 1351 1542 242 44 3 chrX 100468286 100468630 -66181666 - ORR1D2 LTR MaLR -12 358 1 6 1351 632 252 8 15 chrX 100468836 100468969 -66181327 - ID_B1 SINE B4 0 224 93 6 1351 246 172 0 30 chrX 100469237 100469303 -66180993 + Lx5 LINE L1 6976 7039 -11 6 1351 950 270 71 36 chrX 100469352 100469419 -66180877 + B4A SINE B4 2 65 -227 6 1351 429 169 323 78 chrX 100469419 100469586 -66180710 + B3 SINE B2 1 208 -8 6 1351 950 270 71 36 chrX 100469586 100469798 -66180498 + B4A SINE B4 66 291 -1 6 1351 210 37 0 0 chrX 100469918 100469945 -66180351 + (C)n Simple_repeat Simple_repeat 1 27 0 6 1351 781 173 60 0 chrX 100470419 100470552 -66179744 - B1_Mur4 SINE Alu -9 141 1 6 1351 1097 52 0 0 chrX 100470882 100471017 -66179279 - B1_Mus1 SINE Alu 0 148 14 6 1351 387 113 0 0 chrX 100471135 100471197 -66179099 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 1351 466 107 2 3 chrX 100471206 100471278 -66179018 + B2_Mm2 SINE B2 1 71 -122 6 1351 264 262 0 32 chrX 100471281 100471344 -66178952 + PB1 SINE Alu 65 125 -2 6 1351 186 43 0 0 chrX 100471414 100471437 -66178859 + (CATA)n Simple_repeat Simple_repeat 2 24 0 6 1351 861 228 148 23 chrX 100471447 100471703 -66178593 + B4 SINE B4 1 288 -4 6 1351 204 40 0 0 chrX 100471718 100471743 -66178553 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1351 1228 55 7 0 chrX 100471775 100471921 -66178375 + B1_Mus1 SINE Alu 1 147 -1 6 1351 662 65 0 11 chrX 100471922 100472015 -66178281 + (GAAAA)n Simple_repeat Simple_repeat 4 95 0 6 1351 4246 101 37 30 chrX 100472059 100472731 -66177565 + Lx2 LINE L1 5969 6645 -352 6 1351 1557 91 18 0 chrX 100472729 100472948 -66177348 + Lx2 LINE L1 6775 6997 0 6 1351 26 30 0 0 chrX 100473153 100473186 -66177110 + AT_rich Low_complexity Low_complexity 1 33 0 6 1351 1970 173 76 24 chrX 100473302 100473763 -66176533 + Lx LINE L1 6169 6653 -1 6 1351 995 118 13 34 chrX 100473832 100473981 -66176315 + B1_Mus1 SINE Alu 1 146 -2 6 1351 1420 69 40 0 chrX 100474343 100474516 -66175780 - B2_Mm2 SINE B2 -14 181 2 6 1351 190 214 24 0 chrX 100474535 100474577 -66175719 - MER5A DNA MER1_type -76 113 71 6 1351 872 206 0 14 chrX 100474744 100474892 -66175404 + B1_Mus2 SINE Alu 1 146 -1 6 1351 21 36 0 0 chrX 100475988 100476016 -66174280 + AT_rich Low_complexity Low_complexity 1 28 0 6 1351 360 0 0 0 chrX 100476512 100476552 -66173744 + (TCC)n Simple_repeat Simple_repeat 2 41 0 6 1351 651 26 0 0 chrX 100476616 100476693 -66173603 + (TC)n Simple_repeat Simple_repeat 1 77 0 6 1351 351 0 0 0 chrX 100477443 100477482 -66172814 + (A)n Simple_repeat Simple_repeat 1 39 0 6 1351 831 255 127 27 chrX 100477642 100478128 -66172168 + L1M2 LINE L1 5161 5696 -595 6 1351 27 0 0 0 chrX 100478135 100478162 -66172134 + AT_rich Low_complexity Low_complexity 1 27 0 6 1351 907 294 89 30 chrX 100478234 100478443 -66171853 - L1MA5 LINE L1 -273 6027 5788 6 1351 1272 54 0 0 chrX 100478443 100478590 -66171706 + B1_Mm SINE Alu 1 147 0 6 1351 907 294 89 30 chrX 100478590 100478850 -66171446 - L1MA5 LINE L1 -513 5787 5530 6 1351 1072 123 40 56 chrX 100478886 100479084 -66171212 - B2_Mm2 SINE B2 0 195 1 6 1351 553 214 38 172 chrX 100479103 100479289 -66171007 - B3A SINE B2 -36 162 2 6 1351 271 297 19 56 chrX 100479777 100479884 -66170412 + RMER15 LTR ERVL 430 532 -43 6 1351 411 212 106 0 chrX 100479884 100479997 -66170299 - ERVL-B4-int LTR ERVL -34 5680 5556 6 1351 258 73 0 0 chrX 100480009 100480050 -66170246 + RMER1B Other Other 58 98 -968 6 1351 488 241 41 14 chrX 100480067 100480214 -66170082 + L1_Mur3 LINE L1 5307 5457 -423 6 1351 215 224 20 0 chrX 100480215 100480264 -66170032 + ID4 SINE ID 2 51 -32 6 1351 425 133 13 0 chrX 100480289 100480364 -66169932 + (GA)n Simple_repeat Simple_repeat 1 76 0 7 1351 1135 56 0 0 chrX 100480387 100480529 -66169767 + B1_Mus1 SINE Alu 7 148 0 7 1351 1247 57 0 0 chrX 100480730 100480871 -66169425 + B1_Mus2 SINE Alu 1 141 -6 7 1351 414 0 0 0 chrX 100481316 100481362 -66168934 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1351 752 236 27 11 chrX 100481894 100482082 -66168214 + B3A SINE B2 3 193 -5 7 1351 249 224 72 29 chrX 100484721 100484790 -66165506 + MLT2C1 LTR ERVL 182 253 -144 7 1351 365 234 131 60 chrX 100484859 100485027 -66165269 + ERVL-B4-int LTR ERVL 121 300 -5414 7 1351 1522 72 5 15 chrX 100485060 100485257 -66165039 + B2_Mm2 SINE B2 1 195 0 7 1351 265 312 28 42 chrX 100485325 100485469 -66164827 + L1MA5 LINE L1 3906 4047 -2093 7 1351 1739 305 46 44 chrX 100485478 100486086 -66164210 + MTE-int LTR MaLR 930 1538 -42 7 1351 277 313 146 94 chrX 100486105 100486380 -66163916 + ORR1D1 LTR MaLR 23 311 -63 7 1351 991 241 84 28 chrX 100486434 100486754 -66163542 + L1MA5 LINE L1 4534 4871 -1272 7 1351 445 309 167 28 chrX 100486777 100487167 -66163129 + L1MA5 LINE L1 4943 5386 -757 7 1351 588 324 0 26 chrX 100487252 100487404 -66162892 - ID_B1 SINE B4 -4 220 73 7 1351 225 0 0 0 chrX 100487429 100487454 -66162842 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 7 1351 503 287 26 0 chrX 100487458 100487573 -66162723 - B1F SINE Alu -13 136 19 7 1351 1222 295 146 33 chrX 100487595 100487869 -66162427 + L1MA5 LINE L1 5485 5800 -497 7 1351 1293 42 0 0 chrX 100487869 100488012 -66162284 + B1_Mus1 SINE Alu 1 143 -5 7 1351 1222 303 83 18 chrX 100488012 100488437 -66161859 + L1MA5 LINE L1 5801 6266 -34 7 1351 2381 103 12 45 chrX 100488532 100488866 -66161430 - ORR1A2 LTR MaLR -4 323 1 7 1351 318 279 29 0 chrX 100488996 100489100 -66161196 + L1M2 LINE L1 5467 5573 -727 7 1351 640 262 20 46 chrX 100489273 100489425 -66160871 + B1_Mur1 SINE Alu 1 148 -1 7 1351 749 235 22 45 chrX 100489435 100489658 -66160638 + L1M2 LINE L1 5556 5773 -518 7 1351 331 244 24 39 chrX 100489666 100489763 -66160533 + MLT1E1 LTR MaLR 370 471 -183 7 1351 918 260 0 101 chrX 100489879 100490023 -66160273 + Lx8 LINE L1 6811 6953 -520 7 1351 1293 55 0 0 chrX 100490023 100490169 -66160127 + B1_Mus2 SINE Alu 2 147 0 7 1351 918 260 0 101 chrX 100490169 100490311 -66159985 + Lx8 LINE L1 6954 7068 -405 7 1351 530 262 164 0 chrX 100490334 100490456 -66159840 + RSINE1 SINE B4 3 144 -21 7 1351 1234 62 7 0 chrX 100490531 100490676 -66159620 + B1_Mm SINE Alu 1 146 -1 7 1351 255 61 0 0 chrX 100490676 100490709 -66159587 + (TAA)n Simple_repeat Simple_repeat 2 34 0 7 1351 183 42 0 0 chrX 100490838 100490862 -66159434 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 7 1351 305 45 0 0 chrX 100490864 100490908 -66159388 - B1_Mm SINE Alu 0 147 104 7 1351 285 213 0 47 chrX 100490990 100491054 -66159242 + L1M2 LINE L1 5783 5843 -328 7 1351 834 274 60 21 chrX 100491088 100491323 -66158973 + Lx8 LINE L1 7010 7253 -220 7 1351 1201 156 0 33 chrX 100491324 100491536 -66158760 + Lx2 LINE L1 6637 6841 -156 7 1351 630 88 33 0 chrX 100491529 100491620 -66158676 + L1_Mus4 LINE L1 6243 6336 -300 7 1351 1666 128 40 0 chrX 100491620 100491894 -66158402 - BGLII LTR ERVK -136 285 1 7 1351 309 343 19 56 chrX 100491899 100492007 -66158289 + RSINE1 SINE B4 54 157 -8 7 1351 21 36 0 0 chrX 100492009 100492037 -66158259 + AT_rich Low_complexity Low_complexity 1 28 0 7 1351 978 96 22 0 chrX 100492062 100492197 -66158099 - Lx3C LINE L1 -1070 5906 5769 7 1351 3213 122 88 40 chrX 100492190 100492738 -66157558 + Lx2 LINE L1 6072 6645 -352 7 1351 1534 89 18 9 chrX 100492733 100492959 -66157337 + Lx2 LINE L1 6770 6997 0 7 1351 512 50 5 0 chrX 100492958 100493026 -66157270 - Lx3_Mus LINE L1 -1227 5782 5676 7 1351 6373 95 11 21 chrX 100493028 100493434 -66156862 + Lx3B LINE L1 6088 6487 -486 7 1351 3396 34 31 0 chrX 100493434 100493818 -66156478 - MTA_Mm LTR MaLR 0 396 1 7 1351 6373 95 11 21 chrX 100493818 100494306 -66155990 + Lx3B LINE L1 6488 6973 0 7 1351 651 163 40 24 chrX 100494817 100494943 -66155353 + RLTR24 LTR ERV1 1 128 -401 7 1351 845 172 34 28 chrX 100494914 100495093 -66155203 + RLTR24 LTR ERV1 350 529 0 7 1351 189 273 73 0 chrX 100495747 100495802 -66154494 + L3 LINE CR1 4006 4064 -425 7 1351 341 258 135 0 chrX 100496431 100496520 -66153776 + RSINE1 SINE B4 2 102 -63 7 1351 1694 199 97 26 chrX 100496911 100497302 -66152994 - MTD LTR MaLR 0 419 1 7 1351 213 336 129 39 chrX 100497464 100497619 -66152677 + MIR3 SINE MIR 17 185 -23 7 1351 590 240 8 8 chrX 100497620 100497746 -66152550 + B1_Mur4 SINE Alu 2 127 -23 7 1351 213 108 0 0 chrX 100497849 100497886 -66152410 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 7 1351 227 87 0 42 chrX 100498047 100498095 -66152201 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 7 1351 908 44 0 0 chrX 100498097 100498210 -66152086 - B1_Mus1 SINE Alu -1 147 35 7 1351 249 224 0 0 chrX 100498225 100498283 -66152013 + CT-rich Low_complexity Low_complexity 3 60 0 7 1351 727 212 78 12 chrX 100498592 100498759 -66151537 - Lx8 LINE L1 -616 6857 6680 7 1351 336 273 0 20 chrX 100498759 100498860 -66151436 - L1_Mur3 LINE L1 -3598 2282 2184 7 1351 535 206 151 0 chrX 100498890 100499016 -66151280 - B1_Mus1 SINE Alu -2 146 2 7 1351 1441 264 52 82 chrX 100499018 100499101 -66151195 - L1_Mur3 LINE L1 -3686 2194 2119 7 1351 1168 82 7 0 chrX 100499101 100499247 -66151049 + B1_Mus1 SINE Alu 2 148 0 7 1351 1441 264 52 82 chrX 100499247 100499939 -66150357 - L1_Mur3 LINE L1 -3762 2118 1443 7 1351 24 32 0 0 chrX 100499963 100499994 -66150302 + AT_rich Low_complexity Low_complexity 1 31 0 7 1351 1024 76 62 0 chrX 100500000 100500144 -66150152 - B2_Mm2 SINE B2 -42 153 1 1 1351 430 270 54 16 chrX 100500165 100500398 -66149898 - L1_Rod LINE L1 -4435 1412 1166 2 1351 1706 286 60 112 chrX 100500949 100502508 -66147788 + Lx7 LINE L1 4647 6156 -1317 3 1351 528 26 39 0 chrX 100502523 100502601 -66147695 + (TG)n Simple_repeat Simple_repeat 2 82 0 4 1351 921 121 0 113 chrX 100502677 100502845 -66147451 + B1_Mur4 SINE Alu 2 150 0 5 1351 1242 223 99 22 chrX 100502943 100503102 -66147194 - MTD LTR MaLR 0 419 242 6 1351 3437 46 5 2 chrX 100503102 100503495 -66146801 - MTA_Mm LTR MaLR -2 394 1 7 1351 1242 223 99 22 chrX 100503495 100503647 -66146649 - MTD LTR MaLR -178 241 84 6 1351 552 135 0 22 chrX 100503656 100503747 -66146549 - B1_Mus2 SINE Alu 0 147 59 8 1351 311 75 0 0 chrX 100503745 100503785 -66146511 + ORR1A4 LTR MaLR 5 44 -285 9 1351 550 256 16 0 chrX 100503785 100503914 -66146382 - MTD LTR MaLR -218 201 71 1 1351 1251 68 0 0 chrX 100503958 100504104 -66146192 - B1_Mus1 SINE Alu 0 148 3 1 1351 317 243 14 0 chrX 100504106 100504180 -66146116 - MTD LTR MaLR -339 82 8 1 1351 283 245 51 102 chrX 100504183 100504301 -66145995 - MTD-int LTR MaLR 0 1258 1147 1 1351 771 271 12 2 chrX 100504305 100504488 -66145808 + ORR1D2 LTR MaLR 1 182 -192 1 1351 5671 45 8 1 chrX 100504745 100505395 -66144901 - L1_Mus1 LINE L1 0 6567 5914 1 1351 2215 107 0 0 chrX 100505397 100505707 -66144589 + L1_Mm LINE L1 4979 5288 -595 1 1351 579 29 0 0 chrX 100505893 100505962 -66144334 + (TTCC)n Simple_repeat Simple_repeat 4 72 0 1 1351 714 24 0 0 chrX 100505970 100506054 -66144242 + (TC)n Simple_repeat Simple_repeat 2 85 0 1 1351 635 145 3 1 chrX 100506686 100506807 -66143489 + L1_Mur1 LINE L1 2762 2883 -3003 1 1351 668 165 15 8 chrX 100506807 100506941 -66143355 + Lx2A1 LINE L1 6859 6993 -15 1 1351 2292 229 93 16 chrX 100507371 100507940 -66142356 - Lx6 LINE L1 -26 7434 6822 1 1351 590 192 8 48 chrX 100507969 100508095 -66142201 + ORR1D2 LTR MaLR 186 306 -88 1 1351 1261 41 7 0 chrX 100508417 100508562 -66141734 + B1_Mus2 SINE Alu 2 147 0 2 1351 378 61 0 0 chrX 100508562 100508611 -66141685 + (A)n Simple_repeat Simple_repeat 1 49 0 2 1351 1157 80 0 0 chrX 100508622 100508760 -66141536 + B1_Mus2 SINE Alu 1 138 -9 2 1351 1254 21 43 0 chrX 100509034 100509175 -66141121 + B1_Mm SINE Alu 1 147 0 2 1351 237 132 0 0 chrX 100509176 100509214 -66141082 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 2 1351 311 113 0 19 chrX 100509527 100509581 -66140715 + (GGGGA)n Simple_repeat Simple_repeat 5 57 0 2 1351 579 130 10 39 chrX 100509812 100509916 -66140380 + B1_Mm SINE Alu 47 147 0 2 1351 863 33 20 0 chrX 100510186 100510307 -66139989 - B1_Mm SINE Alu -9 139 2 2 1351 207 333 118 42 chrX 100510322 100510350 -66139946 + MIRm SINE MIR 18 45 -231 2 1351 3681 28 2 0 chrX 100510350 100510745 -66139551 - MTA_Mm LTR MaLR 0 396 1 2 1351 207 333 118 42 chrX 100510745 100510835 -66139461 + MIRm SINE MIR 46 144 -132 2 1351 617 195 138 0 chrX 100510916 100511039 -66139257 - B1F SINE Alu -5 144 5 3 1351 341 260 48 39 chrX 100511149 100511253 -66139043 + MIRb SINE MIR 124 228 -40 3 1351 535 294 7 29 chrX 100511468 100511608 -66138688 - ID_B1 SINE B4 -7 217 81 3 1351 208 315 228 0 chrX 100511610 100511727 -66138569 + L2 LINE L2 2770 2911 -508 3 1351 3641 20 2 10 chrX 100511727 100512126 -66138170 - MTA_Mm LTR MaLR 0 396 1 3 1351 208 315 228 0 chrX 100512126 100512157 -66138139 + L2 LINE L2 2912 2951 -468 3 1351 516 132 0 0 chrX 100512352 100512435 -66137861 + (TTC)n Simple_repeat Simple_repeat 1 83 0 3 1351 333 299 21 65 chrX 100512509 100512602 -66137694 + RSINE1 SINE B4 4 92 -73 3 1351 1182 98 6 0 chrX 100512611 100512784 -66137512 - B2_Mm1a SINE B2 0 193 20 3 1351 254 258 0 83 chrX 100512799 100512871 -66137425 + RSINE1 SINE B4 100 165 0 3 1351 652 264 20 49 chrX 100514040 100514243 -66136053 + B3A SINE B2 2 198 0 3 1351 244 219 128 37 chrX 100514254 100514363 -66135933 + Lx8 LINE L1 7353 7471 -2 3 1351 1214 58 0 0 chrX 100515343 100515481 -66134815 + B1_Mus2 SINE Alu 3 140 -7 4 1351 1451 55 50 0 chrX 100515607 100515788 -66134508 - B2_Mm1a SINE B2 -3 190 1 4 1351 693 56 0 0 chrX 100516021 100516111 -66134185 + (TTC)n Simple_repeat Simple_repeat 2 91 0 4 1351 270 297 14 0 chrX 100516193 100516267 -66134029 + L2a LINE L2 3348 3422 -4 4 1351 216 0 0 0 chrX 100517608 100517632 -66132664 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1351 180 0 0 0 chrX 100519593 100519613 -66130683 + (GA)n Simple_repeat Simple_repeat 1 20 0 4 1351 474 33 0 0 chrX 100519735 100519795 -66130501 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 1351 2390 66 0 7 chrX 100519835 100520126 -66130170 - L1_Mus1 LINE L1 0 6567 6279 4 1351 381 22 0 0 chrX 100520632 100520678 -66129618 + (TTTTG)n Simple_repeat Simple_repeat 3 48 0 4 1351 205 337 187 22 chrX 100522648 100522830 -66127466 + MIRc SINE MIR 24 235 -33 4 1351 1038 158 0 0 chrX 100522839 100522985 -66127311 + B1_Mur3 SINE Alu 2 147 -2 5 1351 1226 69 0 0 chrX 100524231 100524375 -66125921 - B1_Mus2 SINE Alu -3 144 1 5 1351 321 319 179 11 chrX 100524512 100524702 -66125594 + MIRc SINE MIR 7 228 -40 5 1351 187 184 82 0 chrX 100525984 100526033 -66124263 - MIR SINE MIR -92 170 118 5 1351 284 201 75 48 chrX 100526126 100526314 -66123982 + RMER17C LTR ERVK 85 277 -133 5 1351 240 279 11 65 chrX 100526916 100527008 -66123288 - RLTR10D LTR ERVK -209 150 64 5 1351 761 245 141 0 chrX 100527260 100527444 -66122852 + ID_B1 SINE B4 1 210 -14 5 1351 1218 48 7 0 chrX 100527824 100527970 -66122326 + B1_Mus2 SINE Alu 1 147 0 5 1351 243 0 0 0 chrX 100527970 100527997 -66122299 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1351 242 143 20 0 chrX 100528122 100528171 -66122125 + CT-rich Low_complexity Low_complexity 1 50 0 5 1351 267 281 130 33 chrX 100528692 100528784 -66121512 + BC1_Mm scRNA scRNA 1 101 -51 6 1351 247 288 132 40 chrX 100528903 100529055 -66121241 + L1M4b LINE L1 1260 1425 -5479 6 1351 1265 41 0 0 chrX 100529079 100529225 -66121071 + B1_Mus1 SINE Alu 1 146 -2 6 1351 533 286 40 33 chrX 100529225 100529377 -66120919 + ID_B1 SINE B4 69 221 -3 6 1351 227 247 93 27 chrX 100529400 100529475 -66120821 - ID2 SINE ID 0 83 4 6 1351 378 171 0 0 chrX 100529487 100529557 -66120739 + CT-rich Low_complexity Low_complexity 3 72 0 6 1351 270 336 37 28 chrX 100529561 100529668 -66120628 - PB1D10 SINE Alu -9 108 1 6 1351 369 268 104 120 chrX 100529672 100529753 -66120543 + L1M4b LINE L1 1678 1740 -5594 6 1351 800 133 85 43 chrX 100529753 100529894 -66120402 + B1_Mur3 SINE Alu 1 147 -2 6 1351 369 268 104 120 chrX 100529894 100529943 -66120353 + L1M4b LINE L1 1741 1781 -5553 6 1351 1543 64 5 11 chrX 100529943 100530133 -66120163 + B2_Mm1t SINE B2 1 189 -4 6 1351 369 268 104 120 chrX 100530133 100530260 -66120036 + L1M4b LINE L1 1782 1932 -5402 6 1351 1273 61 0 0 chrX 100530260 100530407 -66119889 + B1_Mus2 SINE Alu 1 147 0 6 1351 1982 27 18 0 chrX 100530476 100530698 -66119598 - L1_Mus1 LINE L1 -2 6565 6340 7 1351 491 274 44 44 chrX 100530702 100530885 -66119411 + Lx5 LINE L1 6867 7049 -1 7 1351 461 275 0 132 chrX 100530905 100531064 -66119232 + ID_B1 SINE B4 86 223 -1 7 1351 277 71 0 0 chrX 100531078 100531120 -66119176 + B1_Mm SINE Alu 106 147 0 7 1351 236 71 48 0 chrX 100531120 100531162 -66119134 + (CAAAAA)n Simple_repeat Simple_repeat 5 48 0 7 1351 484 236 130 10 chrX 100531173 100531321 -66118975 + B4A SINE B4 2 171 -121 7 1351 1238 48 0 14 chrX 100531372 100531520 -66118776 - B1_Mus2 SINE Alu -1 146 1 7 1351 521 291 18 24 chrX 100531527 100531696 -66118600 + Lx8 LINE L1 6962 7129 -344 7 1351 938 216 10 80 chrX 100531701 100531762 -66118534 + B3 SINE B2 2 52 -164 7 1351 1409 29 109 6 chrX 100531762 100531936 -66118360 + B2_Mm1a SINE B2 1 192 -1 7 1351 938 216 10 80 chrX 100531936 100532075 -66118221 + B3 SINE B2 53 188 -28 7 1352 658 72 93 0 chrX 100532650 100532747 -66117549 + B2_Mm2 SINE B2 2 107 -88 8 1352 1191 88 0 0 chrX 100532896 100533043 -66117253 + B1_Mus2 SINE Alu 1 147 0 8 1352 215 380 0 0 chrX 100533050 100533129 -66117167 + GA-rich Low_complexity Low_complexity 6 84 0 8 1352 23 0 0 0 chrX 100533234 100533257 -66117039 + AT_rich Low_complexity Low_complexity 1 23 0 8 1352 989 57 235 31 chrX 100533261 100533423 -66116873 + B2_Mm2 SINE B2 1 195 0 8 1352 340 93 36 36 chrX 100533785 100533841 -66116455 + B1_Mus2 SINE Alu 4 59 -88 8 1352 225 83 0 0 chrX 100533868 100533904 -66116392 + (A)n Simple_repeat Simple_repeat 1 36 0 8 1352 1266 61 0 0 chrX 100534086 100534233 -66116063 - B1_Mus1 SINE Alu 0 148 2 8 1352 384 138 0 0 chrX 100534244 100534309 -66115987 + (T)n Simple_repeat Simple_repeat 1 65 0 8 1352 1310 34 0 0 chrX 100534309 100534455 -66115841 - B1_Mm SINE Alu 0 147 2 8 1352 255 103 0 0 chrX 100534543 100534582 -66115714 + (T)n Simple_repeat Simple_repeat 1 39 0 9 1352 895 60 0 0 chrX 100534582 100534699 -66115597 - B1_Mus1 SINE Alu 0 148 32 9 1352 1420 106 11 0 chrX 100534703 100534892 -66115404 - B2_Mm1t SINE B2 -1 192 2 9 1352 1191 71 0 0 chrX 100535062 100535202 -66115094 - B1_Mus2 SINE Alu -6 141 2 9 1352 526 268 144 22 chrX 100535493 100535764 -66114532 + L1MA8 LINE L1 4172 4475 -1668 9 1352 593 267 8 15 chrX 100535786 100535919 -66114377 - B1F1 SINE Alu -6 143 12 9 1352 1202 272 65 6 chrX 100535901 100536238 -66114058 + ORR1D2 LTR MaLR 14 370 0 9 1352 407 249 111 12 chrX 100536240 100536411 -66113885 + L1MA8 LINE L1 5042 5229 -914 9 1352 324 0 0 0 chrX 100536412 100536448 -66113848 + (TA)n Simple_repeat Simple_repeat 2 37 0 9 1352 225 94 0 0 chrX 100536560 100536592 -66113704 + (TTTTA)n Simple_repeat Simple_repeat 4 35 0 9 1352 250 0 29 0 chrX 100536592 100536627 -66113669 - B1_Mus2 SINE Alu 0 147 112 9 1352 1123 267 15 15 chrX 100536659 100536929 -66113367 + MTE2a LTR MaLR 110 379 0 1 1352 352 244 37 0 chrX 100536929 100537011 -66113285 + L1MA8 LINE L1 5404 5488 -824 9 1352 640 131 0 0 chrX 100537013 100537112 -66113184 + B1_Mus1 SINE Alu 37 135 -13 1 1352 327 232 111 0 chrX 100537152 100537251 -66113045 + L1MA8 LINE L1 5477 5586 -726 9 1352 625 237 30 0 chrX 100537307 100537438 -66112858 + B1_Mur3 SINE Alu 2 136 -13 1 1352 204 40 0 0 chrX 100537439 100537464 -66112832 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 1 1352 1206 102 0 0 chrX 100537466 100537642 -66112654 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 1 1352 953 227 69 44 chrX 100537667 100537707 -66112589 + L1MA8 LINE L1 5792 5823 -468 9 1352 1090 45 7 57 chrX 100537707 100537848 -66112448 + B1_Mus1 SINE Alu 2 135 -13 1 1352 252 0 0 0 chrX 100537848 100537876 -66112420 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 1352 713 12 12 0 chrX 100537877 100537963 -66112333 + (GAA)n Simple_repeat Simple_repeat 2 88 0 1 1352 953 227 69 44 chrX 100537963 100538237 -66112059 + L1MA8 LINE L1 5824 6116 -175 9 1352 23 0 0 0 chrX 100538322 100538345 -66111951 + AT_rich Low_complexity Low_complexity 1 23 0 1 1352 622 210 57 2 chrX 100538793 100538929 -66111367 + B1_Mur3 SINE Alu 9 149 0 1 1352 605 287 0 29 chrX 100539245 100539385 -66110911 + B1_Mur1 SINE Alu 2 137 -12 1 1352 360 0 0 0 chrX 100539387 100539427 -66110869 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1352 953 180 0 0 chrX 100539522 100539672 -66110624 - B1_Mur4 SINE Alu 0 150 1 1 1352 186 40 0 0 chrX 100539740 100539748 -66110548 + (T)n Simple_repeat Simple_repeat 1 8 0 1 1352 1105 80 65 0 chrX 100539748 100539886 -66110410 - B1_Mus2 SINE Alu 0 147 1 1 1352 186 40 0 0 chrX 100539886 100539902 -66110394 + (T)n Simple_repeat Simple_repeat 1 16 0 1 1352 565 194 202 0 chrX 100540138 100540262 -66110034 - B1_Mur4 SINE Alu 0 150 2 1 1352 1286 41 7 0 chrX 100540372 100540518 -66109778 + B1_Mus1 SINE Alu 2 148 0 1 1352 535 150 32 85 chrX 100540572 100540761 -66109535 + RMER17C LTR ERVK 97 275 -135 1 1352 4144 143 57 52 chrX 100540786 100541235 -66109061 + Lx4B LINE L1 5498 5973 -1085 1 1352 830 59 246 0 chrX 100541235 100541353 -66108943 + B1_Mm SINE Alu 1 147 0 1 1352 4144 143 56 63 chrX 100541353 100541809 -66108487 + Lx4B LINE L1 5974 6403 -655 1 1352 1078 226 136 24 chrX 100541809 100542063 -66108233 + MTD LTR MaLR 92 380 -39 1 1352 2409 130 65 90 chrX 100542063 100542495 -66107801 + MTC LTR MaLR 1 421 0 1 1352 1078 226 136 24 chrX 100542495 100542535 -66107761 + MTD LTR MaLR 381 419 0 1 1352 240 266 24 71 chrX 100542530 100542615 -66107681 + ID4 SINE ID 2 82 -1 1 1352 401 50 17 0 chrX 100542770 100542830 -66107466 + (TC)n Simple_repeat Simple_repeat 2 62 0 1 1352 846 165 0 29 chrX 100542844 100542981 -66107315 - B1_Mur3 SINE Alu -14 135 3 1 1352 207 0 0 0 chrX 100542994 100543017 -66107279 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1352 988 40 0 0 chrX 100543020 100543144 -66107152 - B1_Mm SINE Alu 0 147 24 1 1352 895 308 47 19 chrX 100543152 100543681 -66106615 + L1MC LINE L1 2624 3167 -2979 1 1352 473 226 8 39 chrX 100543705 100543834 -66106462 + BC1_Mm scRNA scRNA 4 128 -24 1 1352 225 231 75 25 chrX 100544465 100544545 -66105751 + MLT1B LTR MaLR 191 274 -116 1 1352 508 245 24 61 chrX 100544526 100544549 -66105747 + ID_B1 SINE B4 66 224 0 1 1352 825 138 28 28 chrX 100544549 100544691 -66105605 + B1_Mur2 SINE Alu 6 147 -2 1 1352 576 261 108 0 chrX 100544713 100544843 -66105453 + RSINE1 SINE B4 3 146 -19 1 1352 219 88 0 0 chrX 100544848 100544882 -66105414 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1352 348 43 0 0 chrX 100544882 100544927 -66105369 + (GA)n Simple_repeat Simple_repeat 2 47 0 1 1352 883 270 91 103 chrX 100544945 100545700 -66104596 + L1MB7 LINE L1 5385 6130 -54 1 1352 633 225 42 0 chrX 100545785 100545905 -66104391 + B1_Mur1 SINE Alu 4 128 -21 1 1352 237 108 0 0 chrX 100545983 100546020 -66104276 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1352 258 322 32 11 chrX 100546020 100546114 -66104182 - Lx8 LINE L1 -144 7329 7234 1 1352 503 284 49 69 chrX 100546130 100546376 -66103920 + L1MDa LINE L1 194 434 -6199 1 1352 423 332 47 21 chrX 100546486 100546720 -66103576 + L1MDa LINE L1 846 1085 -5548 1 1352 754 255 0 0 chrX 100546722 100546871 -66103425 + B1_Mur1 SINE Alu 1 149 0 1 1352 1286 48 0 0 chrX 100546875 100547020 -66103276 + B1_Mm SINE Alu 1 145 -2 1 1352 312 161 0 0 chrX 100547027 100547089 -66103207 + A-rich Low_complexity Low_complexity 1 62 0 1 1352 478 301 86 51 chrX 100547102 100547345 -66102951 + L1MDa LINE L1 1658 1916 -4717 1 1352 1267 117 26 5 chrX 100547345 100547534 -66102762 + B2_Mm2 SINE B2 1 193 -2 1 1352 478 302 68 62 chrX 100547534 100547625 -66102671 + L1MDa LINE L1 1903 1987 -4631 1 1352 483 0 14 29 chrX 100547769 100547838 -66102458 + (GAGAA)n Simple_repeat Simple_repeat 5 72 0 1 1352 848 243 43 11 chrX 100548118 100548305 -66101991 - B3A SINE B2 -5 193 1 1 1352 750 280 69 12 chrX 100548305 100548681 -66101615 + L1MB5 LINE L1 5595 5991 -187 1 1352 294 268 11 23 chrX 100548712 100548800 -66101496 + L1MB5 LINE L1 6040 6126 -52 1 1352 1058 237 33 14 chrX 100549223 100549477 -66100819 - ID_B1 SINE B4 -24 268 8 1 1352 792 155 251 18 chrX 100550467 100550638 -66099658 - B3 SINE B2 -4 212 2 1 1352 245 233 122 37 chrX 100550639 100550746 -66099550 + MIRc SINE MIR 124 239 -29 1 1352 602 89 11 0 chrX 100550823 100550913 -66099383 + (TC)n Simple_repeat Simple_repeat 2 92 0 1 1352 575 200 113 0 chrX 100550932 100551047 -66099249 - B1_Mur3 SINE Alu -21 128 1 1 1352 606 296 36 36 chrX 100551156 100551380 -66098916 + MIRb SINE MIR 25 248 -20 1 1352 303 104 0 0 chrX 100551998 100552046 -66098250 + (TCG)n Simple_repeat Simple_repeat 1 48 0 1 1352 426 132 0 0 chrX 100552061 100552137 -66098159 + (GGA)n Simple_repeat Simple_repeat 2 77 0 1 1352 478 310 21 31 chrX 100552820 100553013 -66097283 + MIR3 SINE MIR 12 202 -6 1 1352 216 0 0 0 chrX 100553734 100553758 -66096538 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1352 342 0 0 0 chrX 100554082 100554120 -66096176 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1352 622 228 55 0 chrX 100554327 100554454 -66095842 + B1F SINE Alu 1 134 -15 1 1352 296 286 26 0 chrX 100554648 100554725 -66095571 - ID4 SINE ID -3 80 2 1 1352 351 0 0 0 chrX 100554965 100555004 -66095292 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1352 1215 44 0 0 chrX 100555005 100555140 -66095156 - B1_Mm SINE Alu -12 135 1 1 1352 196 381 69 33 chrX 100555143 100555417 -66094879 + L2 LINE L2 2469 2752 -667 1 1352 1400 62 39 0 chrX 100556538 100556717 -66093579 - B2_Mm2 SINE B2 -8 187 2 1 1352 210 281 95 40 chrX 100556814 100556940 -66093356 + L2a LINE L2 3282 3414 -12 1 1352 429 219 56 19 chrX 100557360 100557467 -66092829 + PB1D9 SINE Alu 5 115 -5 1 1352 1402 81 16 0 chrX 100558849 100559034 -66091262 - B2_Mm2 SINE B2 -7 188 1 1 1352 563 227 107 23 chrX 100559037 100559168 -66091128 - B1F SINE Alu -2 147 6 1 1352 491 295 76 35 chrX 100559040 100559212 -66091084 - ID_B1 SINE B4 -2 222 44 1 1352 741 245 140 5 chrX 100559201 100559422 -66090874 + MER2 DNA MER2_type 23 273 -72 1 1352 601 201 26 233 chrX 100559423 100559689 -66090607 + B3 SINE B2 1 211 -5 1 1352 295 311 0 0 chrX 100559721 100559795 -66090501 + MER2 DNA MER2_type 262 335 -10 1 1352 189 0 0 0 chrX 100559821 100559842 -66090454 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 1 1352 1212 27 0 45 chrX 100559849 100560003 -66090293 - B1_Mus2 SINE Alu 0 147 1 1 1352 260 200 0 0 chrX 100560043 100560083 -66090213 + B1_Mus1 SINE Alu 1 40 -108 1 1352 396 0 0 0 chrX 100560089 100560133 -66090163 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1352 23 33 0 0 chrX 100560624 100560654 -66089642 + AT_rich Low_complexity Low_complexity 1 30 0 1 1352 25 65 0 0 chrX 100560696 100560742 -66089554 + AT_rich Low_complexity Low_complexity 1 46 0 1 1352 1161 88 0 0 chrX 100560780 100560927 -66089369 + B1_Mus2 SINE Alu 1 147 0 1 1352 264 154 0 0 chrX 100560927 100560979 -66089317 + A-rich Low_complexity Low_complexity 1 52 0 1 1352 936 103 20 20 chrX 100561031 100561179 -66089117 - B1_Mur3 SINE Alu -1 148 1 1 1352 629 135 0 0 chrX 100561201 100561297 -66088999 - B1_Mus2 SINE Alu 0 147 52 1 1352 227 160 57 57 chrX 100561259 100561312 -66088984 - 4.5SRNA scRNA scRNA -8 86 34 1 1352 513 234 89 45 chrX 100562167 100562346 -66087950 + L1MA9 LINE L1 6067 6253 -59 1 1352 394 227 69 40 chrX 100562357 100562458 -66087838 + PB1D10 SINE Alu 13 116 -1 1 1352 1179 68 0 0 chrX 100562459 100562607 -66087689 + B1_Mus1 SINE Alu 1 148 0 1 1352 703 257 0 0 chrX 100563054 100563202 -66087094 - B1F SINE Alu -1 148 1 1 1352 221 0 35 0 chrX 100563230 100563259 -66087037 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 1352 1144 58 0 0 chrX 100563274 100563413 -66086883 - B1_Mus2 SINE Alu -8 139 1 1 1352 303 308 26 0 chrX 100563575 100563653 -66086643 - ID4_ SINE ID -3 80 1 1 1352 378 242 110 10 chrX 100565231 100565331 -66084965 + RSINE1 SINE B4 1 110 -55 1 1352 834 176 14 96 chrX 100566667 100566875 -66083421 + B2_Mm2 SINE B2 2 192 -3 1 1352 528 231 60 30 chrX 100566934 100567068 -66083228 + B1_Mus1 SINE Alu 11 148 0 1 1352 687 210 83 6 chrX 100567068 100567236 -66083060 + B2_Mm2 SINE B2 1 181 -14 1 1352 764 62 92 15 chrX 100567362 100567493 -66082803 - L1Md_F2 LINE L1 -3 6579 6439 1 1352 987 48 0 0 chrX 100567493 100567618 -66082678 + L1Md_F2 LINE L1 6023 6147 -435 1 1352 200 197 263 0 chrX 100569124 100569200 -66081096 - MIRb SINE MIR -3 265 170 1 1352 21 36 0 0 chrX 100569307 100569335 -66080961 + AT_rich Low_complexity Low_complexity 1 28 0 1 1352 267 232 181 12 chrX 100569656 100569739 -66080557 + B4A SINE B4 1 97 -195 1 1352 240 204 40 129 chrX 100569788 100569865 -66080431 + B2_Mm2 SINE B2 97 166 -29 1 1352 1371 71 5 16 chrX 100569865 100570052 -66080244 - B2_Mm1t SINE B2 -7 186 2 2 1352 240 204 40 129 chrX 100570052 100570075 -66080221 + B2_Mm2 SINE B2 167 188 -7 1 1352 981 90 179 0 chrX 100570063 100570219 -66080077 - B2_Mm1a SINE B2 -9 184 1 2 1352 228 278 7 229 chrX 100570269 100570409 -66079887 - B1F1 SINE Alu -40 109 1 2 1352 999 77 0 0 chrX 100570724 100570854 -66079442 + B1_Mus2 SINE Alu 18 147 0 2 1352 449 283 24 30 chrX 100571070 100571234 -66079062 + RSINE1 SINE B4 3 165 0 2 1352 418 272 77 71 chrX 100571280 100571450 -66078846 + ID_B1 SINE B4 15 185 -39 2 1352 656 108 10 10 chrX 100571417 100571520 -66078776 + B2_Mm2 SINE B2 84 186 -9 2 1352 796 168 27 20 chrX 100571965 100572111 -66078185 - B1_Mus2 SINE Alu 0 147 1 2 1352 25 31 0 0 chrX 100572114 100572146 -66078150 + AT_rich Low_complexity Low_complexity 1 32 0 2 1352 829 188 28 18 chrX 100572150 100572337 -66077959 - B3 SINE B2 -1 194 2 2 1352 393 86 0 0 chrX 100572573 100572631 -66077665 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1352 691 234 39 67 chrX 100572631 100572810 -66077486 - ID_B1 SINE B4 -11 213 40 2 1352 209 161 0 0 chrX 100572810 100572841 -66077455 + polypyrimidine Low_complexity Low_complexity 3 33 0 2 1352 706 231 0 0 chrX 100572868 100572998 -66077298 - B1_Mus1 SINE Alu -17 131 2 2 1352 200 204 0 0 chrX 100573134 100573178 -66077118 + T-rich Low_complexity Low_complexity 6 49 0 2 1352 1242 96 28 6 chrX 100573181 100573360 -66076936 - B2_Mm2 SINE B2 -9 186 4 2 1352 297 0 0 0 chrX 100573373 100573406 -66076890 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 2 1352 1065 30 82 0 chrX 100573406 100573541 -66076755 - B1_Mus1 SINE Alu -2 146 1 2 1352 241 252 85 14 chrX 100573543 100573684 -66076612 - L1M4 LINE L1 -3017 3129 2979 2 1352 373 305 59 0 chrX 100573791 100573978 -66076318 - L1M4 LINE L1 -3544 2602 2405 2 1352 271 282 103 52 chrX 100573990 100574106 -66076190 + MLT1A LTR MaLR 1 122 -252 2 1352 1695 26 0 0 chrX 100574230 100574422 -66075874 - B2_Mm1a SINE B2 -1 192 1 2 1352 1402 232 16 3 chrX 100574424 100574735 -66075561 - Lx6 LINE L1 -18 7442 7128 2 1352 243 79 0 0 chrX 100574806 100574844 -66075452 + (T)n Simple_repeat Simple_repeat 1 38 0 2 1352 727 155 98 30 chrX 100574852 100574985 -66075311 - B1_Mur3 SINE Alu -7 142 1 2 1352 332 308 52 37 chrX 100575095 100575230 -66075066 - L1M4 LINE L1 -3748 2398 2262 2 1352 1122 209 24 0 chrX 100575233 100575443 -66074853 - B3 SINE B2 0 216 2 2 1352 337 261 28 7 chrX 100575446 100575589 -66074707 - L1M4 LINE L1 -3863 2283 2138 2 1352 455 255 0 0 chrX 100575596 100575694 -66074602 - MLT1C LTR MaLR 0 467 370 2 1352 1047 139 95 43 chrX 100575694 100575904 -66074392 - ORR1B2 LTR MaLR 0 367 147 2 1352 365 279 66 0 chrX 100575966 100576088 -66074208 - MLT1C LTR MaLR -115 275 146 2 1352 394 258 0 0 chrX 100576093 100576186 -66074110 + ID_B1 SINE B4 99 191 -33 2 1352 297 230 144 42 chrX 100576216 100576334 -66073962 - MLT1C LTR MaLR -258 132 3 2 1352 1008 264 151 6 chrX 100576427 100576739 -66073557 + ORR1D2 LTR MaLR 5 361 -9 2 1352 620 318 64 57 chrX 100576796 100577076 -66073220 - ORR1E LTR MaLR -9 350 69 2 1352 592 274 23 105 chrX 100577091 100577298 -66072998 - L1MC LINE L1 -733 5600 5395 2 1352 291 28 0 0 chrX 100577298 100577334 -66072962 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1352 592 257 51 123 chrX 100577334 100577476 -66072820 - L1MC LINE L1 -939 5394 5276 2 1352 597 225 0 24 chrX 100577493 100577616 -66072680 - PB1D9 SINE Alu 0 120 1 2 1352 1247 90 45 0 chrX 100577624 100577802 -66072494 - B2_Mm2 SINE B2 -8 187 2 2 1352 428 255 27 7 chrX 100578053 100578199 -66072097 - L1MC LINE L1 -2118 4028 3880 2 1352 786 122 114 0 chrX 100578286 100578417 -66071879 - B1_Mur4 SINE Alu 0 150 5 2 1352 293 53 0 0 chrX 100578482 100578520 -66071776 + PB1D9 SINE Alu 83 120 0 2 1352 278 233 109 36 chrX 100578568 100578706 -66071590 - L1MC LINE L1 -2657 3489 3342 2 1352 1185 136 11 0 chrX 100578709 100578886 -66071410 + B2_Mm1t SINE B2 2 180 -13 2 1352 343 181 18 32 chrX 100578913 100578992 -66071304 + B2_Mm2 SINE B2 47 128 -88 2 1352 2274 63 13 0 chrX 100578999 100579299 -66070997 + L1_Mus2 LINE L1 6263 6566 0 2 1352 569 185 32 16 chrX 100579450 100579576 -66070720 - B1_Mur2 SINE Alu -17 132 5 2 1352 640 165 241 0 chrX 100579907 100580040 -66070256 - URR1A DNA MER1_type -59 167 3 2 1352 676 178 80 15 chrX 100580161 100580298 -66069998 - B1_Mus1 SINE Alu 0 148 3 2 1352 462 183 36 63 chrX 100580333 100580444 -66069852 - PB1D9 SINE Alu -8 112 5 2 1352 576 0 0 0 chrX 100580821 100580885 -66069411 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 2 1352 658 245 76 13 chrX 100580897 100581133 -66069163 - L1M3 LINE L1 -1107 5033 4783 2 1352 531 45 0 0 chrX 100581206 100581272 -66069024 + (TG)n Simple_repeat Simple_repeat 1 66 0 2 1352 973 91 63 57 chrX 100581419 100581594 -66068702 - B2_Mm2 SINE B2 -19 176 1 2 1352 343 258 58 8 chrX 100581594 100581715 -66068581 - L1M3 LINE L1 -1350 4790 4664 2 1352 341 262 113 70 chrX 100581914 100582029 -66068267 - PB1D9 SINE Alu 0 120 1 2 1352 1620 21 11 0 chrX 100582794 100582984 -66067312 + B2_Mm1a SINE B2 2 193 0 2 1352 883 132 83 33 chrX 100583009 100583190 -66067106 - B2_Mm2 SINE B2 -4 191 2 2 1352 198 71 0 0 chrX 100583761 100583789 -66066507 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1352 570 248 0 0 chrX 100583873 100583986 -66066310 + PB1D9 SINE Alu 2 114 -6 2 1352 418 205 349 7 chrX 100584111 100584263 -66066033 + ID_B1 SINE B4 2 205 -19 2 1352 658 179 28 56 chrX 100584304 100584446 -66065850 + B1_Mur1 SINE Alu 12 149 0 2 1352 652 142 0 212 chrX 100585803 100585973 -66064323 + B1_Mur4 SINE Alu 15 148 -2 2 1352 26 30 0 0 chrX 100586305 100586338 -66063958 + AT_rich Low_complexity Low_complexity 1 33 0 2 1352 497 179 69 86 chrX 100587575 100587691 -66062605 + PB1D7 SINE Alu 1 114 -6 2 1352 648 0 0 0 chrX 100587691 100587763 -66062533 + (GGAAA)n Simple_repeat Simple_repeat 3 74 0 2 1352 1183 55 0 0 chrX 100588295 100588441 -66061855 + B1_Mus1 SINE Alu 1 146 -2 2 1352 243 0 0 0 chrX 100588441 100588468 -66061828 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2 1352 306 164 0 0 chrX 100589075 100589130 -66061166 + (TATG)n Simple_repeat Simple_repeat 3 57 0 2 1352 209 279 117 20 chrX 100589255 100589354 -66060942 + MIR3 SINE MIR 73 186 -90 2 1352 285 244 94 9 chrX 100589777 100589926 -66060370 + MIR SINE MIR 19 195 -73 2 1352 291 54 0 0 chrX 100590575 100590612 -66059684 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 1352 609 235 42 0 chrX 100591506 100591625 -66058671 + RSINE1 SINE B4 2 125 -40 2 1352 369 0 0 0 chrX 100591630 100591671 -66058625 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1352 301 310 25 49 chrX 100591671 100591793 -66058503 - RLTR25B LTR ERVK -468 560 442 2 1352 862 101 0 0 chrX 100591691 100591810 -66058486 - B1_Mus2 SINE Alu -5 142 24 2 1352 278 196 0 56 chrX 100591805 100591859 -66058437 - MTC LTR MaLR -52 369 319 2 1352 23 33 0 0 chrX 100591864 100591894 -66058402 + AT_rich Low_complexity Low_complexity 1 30 0 2 1352 543 252 7 22 chrX 100591969 100591989 -66058307 + ID SINE ID 61 78 -146 2 1352 688 214 8 0 chrX 100591989 100592115 -66058181 + B1F2 SINE Alu 1 127 -22 2 1352 1013 122 7 0 chrX 100592685 100592832 -66057464 + B1_Mus1 SINE Alu 1 148 0 2 1352 743 221 43 9 chrX 100593376 100593581 -66056715 + B3A SINE B2 3 210 -6 2 1352 29 0 0 0 chrX 100593581 100593610 -66056686 + AT_rich Low_complexity Low_complexity 1 29 0 2 1352 269 322 39 62 chrX 100593878 100594007 -66056289 - MT2B LTR ERVL -307 294 169 2 1352 503 239 43 0 chrX 100593894 100594011 -66056285 - B1_Mur1 SINE Alu -27 122 1 2 1352 22 0 0 0 chrX 100594230 100594252 -66056044 + AT_rich Low_complexity Low_complexity 1 22 0 2 1352 295 239 128 34 chrX 100594328 100594437 -66055859 - B1F SINE Alu -36 113 3 2 1352 609 212 97 106 chrX 100594477 100594518 -66055778 - MTE-int LTR MaLR -89 1491 1463 2 1352 1136 48 0 20 chrX 100594518 100594667 -66055629 + B1_Mm SINE Alu 2 147 0 2 1352 609 212 97 106 chrX 100594667 100594862 -66055434 - MTE-int LTR MaLR -118 1462 1257 2 1352 496 99 0 0 chrX 100594894 100594965 -66055331 - RLTR24 LTR ERV1 0 529 459 2 1352 4068 108 98 12 chrX 100594986 100595631 -66054665 - Lx4A LINE L1 0 7058 6359 2 1352 246 93 0 0 chrX 100595631 100595674 -66054622 + Lx4A LINE L1 6331 6373 -685 2 1352 2360 31 10 3 chrX 100596136 100596427 -66053869 - ORR1A1-int LTR MaLR -47 1745 1453 2 1352 1244 90 34 0 chrX 100596423 100596600 -66053696 + B2_Mm1t SINE B2 8 190 -3 2 1352 1180 48 0 0 chrX 100596951 100597098 -66053198 + B1_Mus2 SINE Alu 1 147 0 2 1352 22 0 0 0 chrX 100597214 100597236 -66053060 + AT_rich Low_complexity Low_complexity 1 22 0 2 1352 188 35 35 0 chrX 100597282 100597311 -66052985 + (GTTTG)n Simple_repeat Simple_repeat 1 30 0 2 1352 1087 30 82 0 chrX 100597322 100597456 -66052840 - B1_Mus1 SINE Alu 0 148 4 2 1352 1647 16 11 0 chrX 100597871 100598059 -66052237 - B2_Mm1t SINE B2 -3 190 1 2 1352 838 231 5 58 chrX 100598077 100598284 -66052012 - B3A SINE B2 0 198 3 2 1352 651 219 148 32 chrX 100598393 100598511 -66051785 - Lx8 LINE L1 -5 7468 7332 2 1352 435 38 0 0 chrX 100598511 100598564 -66051732 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 2 1352 651 219 148 32 chrX 100598564 100598728 -66051568 - Lx8 LINE L1 -142 7331 7154 2 1352 441 262 79 8 chrX 100599275 100599402 -66050894 + B1_Mur2 SINE Alu 5 140 -9 2 1352 3789 208 42 71 chrX 100599577 100599689 -66050607 - RMER1B Other Other -20 1046 946 2 1352 1116 131 45 0 chrX 100599689 100599865 -66050431 - B2_Mm1t SINE B2 -9 184 1 2 1352 3789 208 42 71 chrX 100599865 100599964 -66050332 - RMER1B Other Other -121 945 855 2 1352 1293 77 50 0 chrX 100599964 100600145 -66050151 - B2_Mm2 SINE B2 -4 191 2 2 1352 3789 208 42 71 chrX 100600145 100601009 -66049287 - RMER1B Other Other -212 854 1 2 1352 475 264 96 129 chrX 100601022 100601231 -66049065 - ID_B1 SINE B4 -20 204 3 2 1352 676 283 77 12 chrX 100601668 100601980 -66048316 - RMER5 LTR ERV1 0 534 128 2 1352 861 201 132 5 chrX 100601985 100602165 -66048131 + B3 SINE B2 3 207 -9 2 1352 1179 54 0 20 chrX 100602165 100602315 -66047981 + B1_Mus2 SINE Alu 1 147 0 3 1352 467 260 31 16 chrX 100602368 100602497 -66047799 - RMER5 LTR ERV1 -381 153 23 2 1352 1163 48 7 7 chrX 100602612 100602759 -66047537 + B1_Mm SINE Alu 1 147 0 3 1352 26 30 0 0 chrX 100603034 100603067 -66047229 + AT_rich Low_complexity Low_complexity 1 33 0 3 1352 717 220 0 0 chrX 100603067 100603208 -66047088 - B1F2 SINE Alu -6 143 3 3 1352 282 210 81 0 chrX 100603263 100603325 -66046971 - RMER15 LTR ERVL 0 575 509 3 1352 326 282 23 68 chrX 100603290 100603423 -66046873 + MT2B LTR ERVL 152 278 -323 3 1352 753 137 17 0 chrX 100603333 100603450 -66046846 + B1_Mur3 SINE Alu 31 149 0 3 1352 180 111 0 0 chrX 100603453 100603480 -66046816 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1352 934 166 200 0 chrX 100603485 100603660 -66046636 + B3 SINE B2 1 210 -6 3 1352 1389 81 38 0 chrX 100603678 100603863 -66046433 + B2_Mm2 SINE B2 2 193 -2 3 1352 323 330 42 34 chrX 100603865 100603984 -66046312 - MTE-int LTR MaLR -300 1280 1161 3 1352 573 66 0 0 chrX 100604080 100604156 -66046140 - B1_Mus2 SINE Alu -71 76 1 3 1352 838 196 0 26 chrX 100604507 100604659 -66045637 + B1_Mur1 SINE Alu 2 149 0 3 1352 1702 192 55 102 chrX 100604782 100605222 -66045074 + MTD LTR MaLR 1 419 0 3 1352 700 260 53 24 chrX 100605222 100605459 -66044837 + MTD-int LTR MaLR 1 269 -1311 3 1352 1265 34 0 0 chrX 100605499 100605646 -66044650 + B1_Mus2 SINE Alu 1 147 0 3 1352 315 0 0 0 chrX 100605650 100605685 -66044611 + (A)n Simple_repeat Simple_repeat 1 35 0 3 1352 1262 231 60 9 chrX 100605699 100606014 -66044282 + MTD LTR MaLR 59 389 -30 3 1352 180 111 0 0 chrX 100606024 100606051 -66044245 + (TTA)n Simple_repeat Simple_repeat 3 29 0 3 1352 1210 70 0 0 chrX 100606051 100606208 -66044088 - B2_Mm2 SINE B2 -38 157 1 3 1352 1062 72 0 7 chrX 100606339 100606478 -66043818 + B1_Mm SINE Alu 2 139 -8 3 1352 636 210 14 42 chrX 100608295 100608439 -66041857 + B1_Mur1 SINE Alu 7 146 -3 3 1352 2579 40 0 15 chrX 100610488 100610821 -66039475 + L1Md_F2 LINE L1 6255 6582 0 3 1352 945 155 0 7 chrX 100610840 100610989 -66039307 + B1_Mus1 SINE Alu 1 148 0 3 1352 602 262 0 26 chrX 100611010 100611163 -66039133 + B1_Mur1 SINE Alu 1 149 0 3 1352 217 229 0 0 chrX 100611453 100611501 -66038795 + T-rich Low_complexity Low_complexity 3 50 0 3 1352 1190 55 0 7 chrX 100612806 100612953 -66037343 + B1_Mm SINE Alu 2 147 0 3 1352 1238 48 0 0 chrX 100613016 100613163 -66037133 + B1_Mm SINE Alu 1 147 0 3 1352 267 152 0 0 chrX 100613735 100613781 -66036515 + (ATG)n Simple_repeat Simple_repeat 1 46 0 3 1352 1286 34 0 0 chrX 100613879 100614026 -66036270 + B1_Mus2 SINE Alu 1 147 0 3 1352 353 231 0 62 chrX 100614064 100614161 -66036135 - B2_Mm2 SINE B2 -103 92 2 3 1352 248 155 10 168 chrX 100614208 100614309 -66035987 + Lx6 LINE L1 7348 7432 -28 3 1352 200 360 81 0 chrX 100614399 100614535 -66035761 + L3 LINE CR1 3868 4014 -475 3 1352 417 70 0 0 chrX 100614747 100614804 -66035492 + (TC)n Simple_repeat Simple_repeat 2 58 0 3 1352 270 0 0 0 chrX 100614805 100614835 -66035461 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 1352 397 318 71 43 chrX 100614849 100615033 -66035263 + MER82 DNA MER2_type 291 479 -174 3 1352 502 152 156 37 chrX 100615251 100615360 -66034936 - B1_Mur4 SINE Alu -7 143 22 3 1352 251 300 86 0 chrX 100615362 100615432 -66034864 - B1F2 SINE Alu -71 78 3 3 1352 2556 117 90 14 chrX 100616428 100616548 -66033748 - Lx LINE L1 -1 6653 6535 3 1352 180 0 0 0 chrX 100616548 100616568 -66033728 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 3 1352 2556 117 90 14 chrX 100616568 100616880 -66033416 - Lx LINE L1 -120 6534 6189 3 1352 391 231 121 0 chrX 100616924 100617015 -66033281 + B1_Mus1 SINE Alu 1 102 -46 3 1352 330 246 0 0 chrX 100617128 100617193 -66033103 + B1_Mur1 SINE Alu 79 143 -6 3 1352 588 211 33 53 chrX 100617474 100617624 -66032672 + B1_Mur1 SINE Alu 1 147 -2 3 1352 365 281 103 17 chrX 100617662 100617778 -66032518 + ID_B1 SINE B4 9 134 -90 3 1352 580 271 28 21 chrX 100618457 100618600 -66031696 + B3A SINE B2 14 157 -41 3 1352 340 76 0 154 chrX 100618613 100618631 -66031665 - RLTR11A LTR ERVK -65 463 451 3 1352 1307 94 11 11 chrX 100618631 100618814 -66031482 - B2_Mm1t SINE B2 -9 184 2 3 1352 340 76 0 154 chrX 100618814 100618873 -66031423 - RLTR11A LTR ERVK -78 450 398 3 1352 28 0 0 0 chrX 100618895 100618923 -66031373 + AT_rich Low_complexity Low_complexity 1 28 0 3 1352 779 185 27 20 chrX 100619338 100619487 -66030809 + B1_Mur4 SINE Alu 1 150 0 3 1352 240 35 0 0 chrX 100619697 100619726 -66030570 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3 1352 203 0 0 36 chrX 100620011 100620039 -66030257 + (GTTTG)n Simple_repeat Simple_repeat 3 29 0 3 1352 1111 103 0 0 chrX 100620045 100620190 -66030106 - B1_Mus2 SINE Alu -2 145 1 3 1352 1146 52 0 0 chrX 100620231 100620366 -66029930 - B1_Mus2 SINE Alu -11 136 2 3 1352 534 159 73 73 chrX 100620407 100620543 -66029753 + B1_Mur2 SINE Alu 10 145 -4 3 1352 2717 77 13 13 chrX 100620678 100621060 -66029236 - L1Md_F2 LINE L1 0 6582 6201 3 1352 4284 47 35 4 chrX 100621060 100621595 -66028701 - L1Md_F2 LINE L1 -4 6578 6027 3 1352 1506 44 39 0 chrX 100621602 100621784 -66028512 - B2_Mm2 SINE B2 -6 189 1 3 1352 736 178 189 58 chrX 100622077 100622268 -66028028 - B3 SINE B2 0 216 1 3 1352 1059 61 18 5 chrX 100622529 100622683 -66027613 + B1_Mus2 SINE Alu 6 311 0 3 1352 847 332 96 32 chrX 100622964 100623372 -66026924 + MLT-int LTR MaLR 967 1400 -335 3 1352 324 279 125 7 chrX 100623373 100623508 -66026788 + B3A SINE B2 36 189 -27 3 1352 620 198 32 0 chrX 100623595 100623721 -66026575 + B1_Mur1 SINE Alu 10 139 -10 3 1352 288 0 0 0 chrX 100623721 100623753 -66026543 + (CACAA)n Simple_repeat Simple_repeat 2 33 0 3 1352 367 296 0 9 chrX 100623957 100624073 -66026223 + MLT-int LTR MaLR 1388 1502 -233 3 1352 699 188 37 15 chrX 100624134 100624269 -66026027 + B1_Mur4 SINE Alu 5 142 -8 3 1352 1036 49 69 0 chrX 100624623 100624767 -66025529 - B2_Mm2 SINE B2 -41 154 1 3 1352 943 211 27 11 chrX 100624790 100624977 -66025319 - B3 SINE B2 0 216 27 3 1352 1262 41 0 0 chrX 100624984 100625130 -66025166 - B1_Mus2 SINE Alu 0 147 2 3 1352 357 232 10 40 chrX 100625151 100625250 -66025046 - L1MA9 LINE L1 -198 6114 6019 3 1352 301 273 0 0 chrX 100625688 100625754 -66024542 + PB1D9 SINE Alu 48 113 -7 3 1352 474 114 0 0 chrX 100625804 100625883 -66024413 + (CAGAGA)n Simple_repeat Simple_repeat 4 82 0 3 1352 861 156 0 26 chrX 100625893 100626037 -66024259 + B1_Mur4 SINE Alu 2 141 -9 3 1352 318 106 0 0 chrX 100626037 100626084 -66024212 + (TAAG)n Simple_repeat Simple_repeat 1 47 0 3 1352 303 333 0 0 chrX 100626364 100626457 -66023839 - PB1D10 SINE Alu -13 104 12 3 1352 181 119 0 45 chrX 100626504 100626548 -66023748 + T-rich Low_complexity Low_complexity 2 43 0 3 1352 639 237 7 7 chrX 100626560 100626700 -66023596 - B1_Mus2 SINE Alu -1 146 7 3 1352 225 352 0 54 chrX 100626724 100626788 -66023508 + (CGTG)n Simple_repeat Simple_repeat 1 61 0 3 1352 477 110 0 0 chrX 100626788 100626861 -66023435 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 1352 225 352 0 54 chrX 100626861 100626889 -66023407 + (CGTG)n Simple_repeat Simple_repeat 2 28 0 3 1352 264 119 0 48 chrX 100627464 100627526 -66022770 + CT-rich Low_complexity Low_complexity 1 59 0 3 1352 688 188 0 30 chrX 100627533 100627665 -66022631 - B1_Mus2 SINE Alu -12 135 8 3 1352 343 107 55 15 chrX 100628184 100628249 -66022047 - PB1D10 SINE Alu -1 126 49 3 1352 431 275 13 53 chrX 100628414 100628564 -66021732 - B4A SINE B4 -147 145 2 3 1352 509 252 0 81 chrX 100628660 100628820 -66021476 - B1F SINE Alu 0 149 3 3 1352 416 127 0 48 chrX 100628838 100628852 -66021444 + A-rich Low_complexity Low_complexity 1 11 0 3 1352 1297 27 0 0 chrX 100628852 100629000 -66021296 + B1_Mus1 SINE Alu 1 148 0 3 1352 416 127 0 48 chrX 100629000 100629068 -66021228 + A-rich Low_complexity Low_complexity 12 79 0 3 1352 1070 189 190 31 chrX 100629100 100629390 -66020906 - MTD LTR MaLR -2 417 82 3 1352 802 248 72 42 chrX 100629409 100629645 -66020651 + Lx8 LINE L1 6619 6861 -612 3 1352 918 64 0 0 chrX 100629677 100629802 -66020494 + B1_Mus2 SINE Alu 10 134 -13 3 1352 255 31 0 0 chrX 100629802 100629834 -66020462 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 3 1352 535 273 132 86 chrX 100629851 100630131 -66020165 + Lx8 LINE L1 6913 7205 -268 3 1352 234 283 135 98 chrX 100630146 100630279 -66020017 + Lx8 LINE L1 7158 7295 -178 3 1352 419 163 163 0 chrX 100630464 100630550 -66019746 + B1F SINE Alu 12 111 -38 3 1352 240 286 56 0 chrX 100630578 100630673 -66019623 + B1F SINE Alu 16 119 -1 3 1352 384 269 16 105 chrX 100630798 100630989 -66019307 - L1M4 LINE L1 -1446 5198 5025 3 1352 356 302 7 67 chrX 100631371 100631388 -66018908 + ID_B1 SINE B4 78 199 -20 3 1352 569 214 9 9 chrX 100631388 100631501 -66018795 + B1_Mur1 SINE Alu 9 121 -28 3 1352 269 267 0 0 chrX 100631509 100631569 -66018727 - RSINE1 SINE B4 -103 62 3 3 1352 245 286 121 35 chrX 100631570 100631635 -66018661 - L1MD LINE L1 -1819 4327 4263 3 1352 336 48 0 0 chrX 100631635 100631677 -66018619 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1352 245 286 121 35 chrX 100631677 100631727 -66018569 - L1MD LINE L1 -1884 4262 4202 3 1352 317 300 78 0 chrX 100631777 100631867 -66018429 - PB1D10 SINE Alu -11 106 10 3 1352 431 283 143 14 chrX 100631791 100631938 -66018358 - ID_B1 SINE B4 -57 167 2 3 1352 1325 259 115 28 chrX 100631942 100632179 -66018117 - L1M4 LINE L1 -1985 4653 4413 3 1352 1409 76 22 0 chrX 100632179 100632364 -66017932 - B2_Mm1t SINE B2 -4 189 1 4 1352 291 28 0 0 chrX 100632368 100632404 -66017892 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 1352 1325 263 110 27 chrX 100632404 100632719 -66017577 - L1M4 LINE L1 -2226 4412 4034 3 1352 217 301 36 72 chrX 100633046 100633157 -66017139 - PB1D10 SINE Alu -1 116 10 4 1352 1649 217 54 0 chrX 100633332 100633705 -66016591 - RMER10B LTR ERVL -1 397 5 4 1352 256 298 105 0 chrX 100633725 100633849 -66016447 - L1MCa LINE L1 -5568 940 804 4 1352 284 252 102 39 chrX 100634329 100634457 -66015839 - L1MCa LINE L1 -6031 477 342 4 1352 391 273 0 43 chrX 100634730 100634845 -66015451 - Lx8 LINE L1 -127 7346 7237 4 1352 529 256 82 58 chrX 100634959 100635166 -66015130 - Lx8 LINE L1 -474 6999 6788 4 1352 686 165 32 123 chrX 100635182 100635369 -66014927 - B2_Mm2 SINE B2 -19 176 7 4 1352 301 321 0 74 chrX 100635382 100635503 -66014793 - Lx8 LINE L1 -676 6797 6686 4 1352 295 249 160 20 chrX 100635530 100635780 -66014516 - L1M4 LINE L1 -3104 3534 3250 3 1352 318 233 35 88 chrX 100635833 100635946 -66014350 - B2_Mm2 SINE B2 -13 182 76 4 1352 1242 27 7 0 chrX 100636702 100636848 -66013448 - B1_Mus2 SINE Alu 0 147 1 4 1352 1765 138 19 35 chrX 100636870 100637185 -66013111 - Lx4A LINE L1 0 7058 6749 4 1352 242 276 47 16 chrX 100637186 100637315 -66012981 - L1M4 LINE L1 -5425 1117 985 3 1352 233 160 293 0 chrX 100637615 100637690 -66012606 - L1M4 LINE L1 -5613 929 833 3 1352 932 218 50 0 chrX 100637703 100637905 -66012391 + B3 SINE B2 1 212 -4 4 1352 230 0 87 22 chrX 100637992 100638038 -66012258 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 4 1352 1041 92 43 0 chrX 100638041 100638182 -66012114 - B1_Mus1 SINE Alu 0 148 2 4 1352 1331 106 16 5 chrX 100638635 100638824 -66011472 - B2_Mm2 SINE B2 -4 191 1 4 1352 1037 58 0 0 chrX 100639372 100639544 -66010752 + L1_Mus1 LINE L1 6427 6567 0 4 1352 189 0 0 0 chrX 100639798 100639819 -66010477 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 4 1352 659 168 0 165 chrX 100639819 100639983 -66010313 - B1_Mur4 SINE Alu -13 137 1 4 1352 422 272 154 34 chrX 100640529 100640795 -66009501 + Lx8 LINE L1 7174 7471 -2 4 1352 248 258 15 111 chrX 100640680 100640815 -66009481 + RMER1C Other Other 1217 1338 -4 4 1352 25 0 0 0 chrX 100640955 100640980 -66009316 + AT_rich Low_complexity Low_complexity 1 25 0 4 1352 710 161 21 49 chrX 100641185 100641329 -66008967 - B1_Mus1 SINE Alu -7 141 2 4 1352 438 219 0 73 chrX 100641329 100641427 -66008869 - ID_B1 SINE B4 -42 182 94 4 1352 217 85 41 41 chrX 100641694 100641743 -66008553 + T-rich Low_complexity Low_complexity 2 50 0 4 1352 1033 56 7 7 chrX 100641746 100641891 -66008405 - B1_Mm SINE Alu 0 147 3 4 1352 741 197 99 22 chrX 100642137 100642319 -66007977 + B3A SINE B2 1 196 -2 4 1352 597 93 0 0 chrX 100642346 100642432 -66007864 - L1_Mur2 LINE L1 -4206 1671 1586 4 1352 324 257 93 56 chrX 100645825 100645932 -66004364 - PB1D9 SINE Alu -7 113 3 4 1352 515 306 81 57 chrX 100646188 100646399 -66003897 + MLT1D LTR MaLR 254 469 -36 4 1352 351 0 0 0 chrX 100646854 100646893 -66003403 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1352 622 99 10 29 chrX 100646896 100647000 -66003296 - B1_Mur3 SINE Alu -7 142 41 4 1352 852 220 5 16 chrX 100647202 100647391 -66002905 - B3 SINE B2 -1 215 29 4 1352 463 231 55 18 chrX 100647412 100647522 -66002774 + B1F SINE Alu 1 114 -35 4 1352 261 0 0 0 chrX 100647537 100647566 -66002730 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1352 239 247 201 6 chrX 100647676 100647855 -66002441 + Tigger6a DNA MER2_type 352 565 -518 4 1352 258 32 0 0 chrX 100648025 100648056 -66002240 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 4 1352 447 19 0 0 chrX 100648056 100648108 -66002188 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1352 1131 68 0 39 chrX 100648133 100648286 -66002010 - B1_Mus2 SINE Alu 0 147 1 4 1352 500 244 8 16 chrX 100648315 100648440 -66001856 - B3A SINE B2 -69 129 6 4 1352 398 224 84 0 chrX 100648442 100648549 -66001747 - ID_B1 SINE B4 -1 223 108 4 1352 21 0 0 0 chrX 100648553 100648574 -66001722 + AT_rich Low_complexity Low_complexity 1 21 0 4 1352 218 32 32 0 chrX 100648672 100648703 -66001593 + (TAA)n Simple_repeat Simple_repeat 2 33 0 4 1352 831 269 125 17 chrX 100648728 100649023 -66001273 - Lx8 LINE L1 -326 7147 6821 4 1352 592 201 69 35 chrX 100649031 100649175 -66001121 - B1_Mur4 SINE Alu -1 149 1 4 1352 731 209 60 0 chrX 100649254 100649436 -66000860 + ID_B1 SINE B4 24 216 -8 4 1352 191 36 36 0 chrX 100649439 100649467 -66000829 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 4 1352 1406 99 16 0 chrX 100649471 100649663 -66000633 + B2_Mm2 SINE B2 1 195 0 4 1352 312 210 0 46 chrX 100649663 100649728 -66000568 - B3A SINE B2 -135 63 2 4 1352 220 91 0 29 chrX 100649728 100649762 -66000534 + (TTCC)n Simple_repeat Simple_repeat 3 35 0 4 1352 446 78 8 73 chrX 100649764 100649888 -66000408 + CT-rich Low_complexity Low_complexity 3 118 0 4 1352 321 313 9 9 chrX 100649895 100650011 -66000285 - PB1D10 SINE Alu -1 116 1 4 1352 835 127 204 44 chrX 100650254 100650435 -65999861 - B3 SINE B2 -6 210 1 4 1352 268 219 71 9 chrX 100650538 100650869 -65999427 + (TTAGGG)n Simple_repeat Simple_repeat 1 351 0 4 1352 216 246 0 55 chrX 100650886 100651067 -65999229 + (TTGG)n Simple_repeat Simple_repeat 4 174 0 4 1352 315 228 58 3 chrX 100651010 100651328 -65998968 + (TTAGGG)n Simple_repeat Simple_repeat 1 335 0 4 1352 326 226 55 0 chrX 100651413 100652331 -65997965 + (TTAGGG)n Simple_repeat Simple_repeat 1 968 0 4 1352 254 160 0 0 chrX 100652406 100652456 -65997840 + B1_Mur1 SINE Alu 93 142 -7 4 1352 542 26 0 13 chrX 100653388 100653465 -65996831 + B1_Mus2 SINE Alu 1 76 -71 4 1352 258 32 0 0 chrX 100653807 100653838 -65996458 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 1352 1178 94 60 16 chrX 100653841 100654025 -65996271 - B2_Mm2 SINE B2 -2 193 2 4 1352 1301 14 0 0 chrX 100654045 100654192 -65996104 - B1_Mus2 SINE Alu 0 147 1 4 1352 436 252 8 50 chrX 100655031 100655152 -65995144 + B1_Mur1 SINE Alu 7 122 -27 4 1352 377 216 165 0 chrX 100655231 100655328 -65994968 + ID_B1 SINE B4 80 192 -32 4 1352 546 261 133 0 chrX 100655512 100655677 -65994619 + B3 SINE B2 25 211 -5 4 1352 405 70 0 0 chrX 100655746 100655803 -65994493 + (CCCA)n Simple_repeat Simple_repeat 1 57 0 4 1352 1306 89 22 0 chrX 100658093 100658273 -65992023 + B2_Mm2 SINE B2 3 186 -9 4 1352 354 183 146 31 chrX 100658307 100658403 -65991893 + PB1D7 SINE Alu 2 108 -12 4 1352 272 250 28 0 chrX 100659588 100659660 -65990636 - PB1 SINE Alu -8 119 46 4 1352 221 191 21 21 chrX 100662013 100662061 -65988235 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1352 316 294 0 24 chrX 100662618 100662785 -65987511 + GA-rich Low_complexity Low_complexity 2 164 0 4 1352 268 230 5 70 chrX 100662894 100663081 -65987215 + GA-rich Low_complexity Low_complexity 2 176 0 4 2 334 253 0 49 chrX 100663110 100663369 -65986927 + GA-rich Low_complexity Low_complexity 1 246 0 4 1353 238 241 0 0 chrX 100663563 100663621 -65986675 - MIRb SINE MIR -32 236 179 4 1353 1071 120 0 12 chrX 100664460 100664629 -65985667 + B2_Mm2 SINE B2 9 175 -20 4 1353 645 170 107 13 chrX 100666477 100666626 -65983670 - B2_Mm2 SINE B2 -31 164 2 4 1353 1200 54 0 0 chrX 100667000 100667148 -65983148 - B1_Mus1 SINE Alu 0 148 1 4 1353 499 145 98 68 chrX 100668092 100668225 -65982071 + B1_Mur4 SINE Alu 13 149 -1 4 1353 441 0 0 0 chrX 100668340 100668389 -65981907 + (A)n Simple_repeat Simple_repeat 1 49 0 4 1353 510 240 54 83 chrX 100669235 100669403 -65980893 + RSINE1 SINE B4 3 165 0 4 1353 316 308 56 0 chrX 100672713 100672820 -65977476 + B1F1 SINE Alu 2 114 -35 4 1353 292 250 26 13 chrX 100673030 100673107 -65977189 + ID4 SINE ID 6 83 0 4 1353 215 143 0 75 chrX 100675538 100675591 -65974705 + (GGCTG)n Simple_repeat Simple_repeat 5 53 0 4 1353 891 80 0 0 chrX 100675596 100675734 -65974562 + (CTGGGG)n Simple_repeat Simple_repeat 6 143 0 4 1353 192 40 0 0 chrX 100678013 100678038 -65972258 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1353 22 0 0 0 chrX 100678676 100678698 -65971598 + AT_rich Low_complexity Low_complexity 1 22 0 4 1353 1038 141 49 43 chrX 100680103 100680288 -65970008 + B2_Mm2 SINE B2 2 187 -8 4 1353 1055 109 7 0 chrX 100680349 100680496 -65969800 - B1_Mus1 SINE Alu 0 148 1 4 1353 698 209 105 0 chrX 100680681 100680834 -65969462 + Lx7 LINE L1 6885 7053 -643 4 1353 228 279 98 8 chrX 100681096 100681219 -65969077 + L1M3 LINE L1 4491 4624 -1516 4 1353 317 217 183 11 chrX 100681244 100681337 -65968959 + ID_B1 SINE B4 93 201 -23 4 1353 977 226 94 63 chrX 100681565 100681896 -65968400 + ORR1C1 LTR MaLR 13 353 -25 4 1353 242 355 71 18 chrX 100681968 100682080 -65968216 + B3A SINE B2 44 161 -37 4 1353 495 107 114 19 chrX 100682131 100682236 -65968060 + L1_Mur2 LINE L1 1478 1592 -4285 4 1353 374 90 60 0 chrX 100682769 100682836 -65967460 + L1_Mur2 LINE L1 1577 1647 -4230 4 1353 186 128 0 0 chrX 100682836 100682875 -65967421 + (A)n Simple_repeat Simple_repeat 1 39 0 4 1353 261 275 14 0 chrX 100682999 100683068 -65967228 - B3A SINE B2 -128 70 1 4 1353 463 204 75 11 chrX 100683090 100683184 -65967112 - B1F1 SINE Alu -39 110 11 4 1353 23 33 0 0 chrX 100683214 100683244 -65967052 + AT_rich Low_complexity Low_complexity 1 30 0 4 1353 573 281 119 34 chrX 100683714 100683983 -65966313 - B4A SINE B4 0 292 1 4 1353 702 253 87 11 chrX 100684016 100684200 -65966096 - B3A SINE B2 0 198 1 4 1353 843 155 14 14 chrX 100684300 100684444 -65965852 + B1_Mus1 SINE Alu 5 148 0 4 1353 403 188 0 0 chrX 100684477 100684546 -65965750 + B3 SINE B2 1 69 -147 4 1353 497 288 8 0 chrX 100685926 100686051 -65964245 - ID_B1 SINE B4 -19 205 80 4 1353 660 145 43 0 chrX 100686089 100686206 -65964090 + B1_Mus2 SINE Alu 24 145 -2 5 1353 264 306 0 53 chrX 100686234 100686310 -65963986 + ID4 SINE ID 1 72 -11 5 1353 432 0 0 0 chrX 100686310 100686358 -65963938 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1353 302 244 12 49 chrX 100686374 100686456 -65963840 + RSINE1 SINE B4 9 87 -78 5 1353 474 18 0 0 chrX 100686469 100686524 -65963772 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 1353 376 273 10 0 chrX 100686794 100686893 -65963403 + ID_B1 SINE B4 125 224 0 5 1353 562 224 259 23 chrX 100687086 100687260 -65963036 - B3 SINE B2 0 216 2 5 1353 315 0 0 0 chrX 100687357 100687392 -65962904 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1353 21 36 0 0 chrX 100687445 100687473 -65962823 + AT_rich Low_complexity Low_complexity 1 28 0 5 1353 567 108 7 58 chrX 100687473 100687611 -65962685 - RMER17C LTR ERVK -135 275 145 5 1353 270 0 0 0 chrX 100687693 100687723 -65962573 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 1353 360 0 0 0 chrX 100688058 100688098 -65962198 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1353 316 272 0 0 chrX 100688135 100688216 -65962080 - B3A SINE B2 -117 81 1 5 1353 198 156 0 0 chrX 100688620 100688665 -65961631 + G-rich Low_complexity Low_complexity 1 45 0 5 1353 238 308 15 0 chrX 100690208 100690273 -65960023 - ID4_ SINE ID -8 75 10 5 1353 385 284 42 0 chrX 100690305 100690400 -65959896 - B3A SINE B2 -14 184 86 5 1353 249 291 90 72 chrX 100690403 100690514 -65959782 - B1_Mus2 SINE Alu -7 113 1 5 1353 278 247 78 0 chrX 100690438 100690515 -65959781 - B4 SINE B4 -125 167 85 5 1353 269 190 136 17 chrX 100690537 100690596 -65959700 - PB1D10 SINE Alu -31 86 21 5 1353 377 248 72 65 chrX 100690653 100690791 -65959505 + B3 SINE B2 78 216 0 5 1353 396 197 0 17 chrX 100691449 100691547 -65958749 - PB1D10 SINE Alu 0 149 43 5 1353 232 256 10 72 chrX 100691588 100691685 -65958611 - L1MCa LINE L1 -4982 1063 973 5 1353 793 224 115 14 chrX 100691693 100691928 -65958368 - MTD LTR MaLR -14 405 156 5 1353 393 86 0 0 chrX 100692009 100692067 -65958229 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 1353 636 271 92 129 chrX 100692077 100692510 -65957786 - L1MCa LINE L1 -5711 1040 624 5 1353 863 155 0 81 chrX 100692592 100692753 -65957543 - B1_Mur2 SINE Alu -1 148 1 5 1353 601 227 0 29 chrX 100693087 100693223 -65957073 - ID_B1 SINE B4 0 224 93 5 1353 186 71 0 0 chrX 100693240 100693268 -65957028 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 5 1353 1087 68 7 52 chrX 100693283 100693438 -65956858 - B1_Mus1 SINE Alu 0 148 1 5 1353 271 254 42 0 chrX 100693557 100693628 -65956668 - ID4_ SINE ID -8 75 2 5 1353 1067 58 7 0 chrX 100693882 100694020 -65956276 - B1_Mus1 SINE Alu -9 139 1 5 1353 1024 139 200 0 chrX 100694148 100694328 -65955968 - B3 SINE B2 0 216 1 5 1353 251 313 48 0 chrX 100694373 100694456 -65955840 - B3 SINE B2 -30 186 100 5 1353 375 297 0 38 chrX 100694458 100694563 -65955733 + ID_B1 SINE B4 114 214 -10 5 1353 30 45 0 0 chrX 100694617 100694661 -65955635 + AT_rich Low_complexity Low_complexity 1 44 0 5 1353 373 277 11 0 chrX 100694734 100694828 -65955468 - B3A SINE B2 -101 97 3 5 1353 804 250 103 26 chrX 100694872 100695143 -65955153 + B4A SINE B4 1 292 0 5 1353 186 143 0 0 chrX 100695741 100695776 -65954520 + (TTAA)n Simple_repeat Simple_repeat 3 37 0 5 1353 402 274 19 0 chrX 100695780 100695886 -65954410 - PB1D10 SINE Alu -9 108 1 5 1353 411 261 11 0 chrX 100697074 100697166 -65953130 - B1F SINE Alu -4 145 53 5 1353 736 86 0 0 chrX 100697174 100697279 -65953017 - B1_Mus2 SINE Alu -4 143 39 5 1353 195 69 0 0 chrX 100697576 100697605 -65952691 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1353 749 122 4 17 chrX 100697705 100697842 -65952454 - B1_Mur4 SINE Alu -2 148 9 5 1353 409 248 14 101 chrX 100697826 100697974 -65952322 - B3 SINE B2 -40 176 42 5 1353 558 210 223 37 chrX 100697985 100698009 -65952287 - B4A SINE B4 -63 229 212 5 1353 1607 205 97 6 chrX 100698009 100698348 -65951948 + ORR1D2 LTR MaLR 1 370 0 5 1353 558 210 223 37 chrX 100698348 100698511 -65951785 - B4A SINE B4 -81 211 7 5 1353 824 158 7 0 chrX 100698756 100698908 -65951388 + CT-rich Low_complexity Low_complexity 3 155 0 5 1353 406 69 0 0 chrX 100698920 100698978 -65951318 - B1_Mus2 SINE Alu -28 119 62 5 1353 1211 54 0 7 chrX 100699129 100699278 -65951018 + B1_Mus1 SINE Alu 1 148 0 5 1353 902 114 0 28 chrX 100699318 100699462 -65950834 - URR1B DNA MER1_type 0 225 86 5 1353 372 260 24 67 chrX 100699462 100699476 -65950820 + CYRA11_Mm Unknown Y-chromosome 209 322 -295 5 1353 264 233 42 76 chrX 100699530 100699674 -65950622 + LTR48 LTR ERV1 482 620 -167 5 1353 359 278 161 10 chrX 100699838 100700031 -65950265 - L1M4b LINE L1 -6544 790 569 5 1353 186 71 0 0 chrX 100700634 100700662 -65949634 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 5 1353 1045 102 0 7 chrX 100700663 100700811 -65949485 - B1_Mus1 SINE Alu -1 147 1 5 1353 465 124 267 0 chrX 100700862 100700967 -65949329 - B3 SINE B2 -83 133 1 5 1353 302 341 76 22 chrX 100701091 100701340 -65948956 - L1MC4a LINE L1 -1032 6850 6552 5 1353 524 234 39 0 chrX 100701756 100701884 -65948412 + ID_B1 SINE B4 81 213 -11 5 1353 1178 68 0 0 chrX 100701897 100702044 -65948252 + B1_Mus1 SINE Alu 1 147 -1 5 1353 204 125 0 0 chrX 100702044 100702076 -65948220 + (GGGAGA)n Simple_repeat Simple_repeat 5 36 0 5 1353 1249 40 0 0 chrX 100702353 100702501 -65947795 + B1_Mus1 SINE Alu 1 148 0 5 1353 396 59 0 0 chrX 100702963 100703014 -65947282 + (GGGAA)n Simple_repeat Simple_repeat 4 54 0 5 1353 705 209 90 63 chrX 100703852 100704041 -65946255 + B3 SINE B2 16 209 -7 5 1353 1216 61 0 0 chrX 100704247 100704394 -65945902 + B1_Mm SINE Alu 1 147 0 5 1353 425 121 0 29 chrX 100704394 100704496 -65945800 + A-rich Low_complexity Low_complexity 1 99 0 5 1353 1095 234 115 43 chrX 100705299 100705605 -65944691 - Tigger1 DNA MER2_type -310 2108 1768 5 1353 787 253 21 0 chrX 100705605 100705799 -65944497 - B3A SINE B2 0 198 1 5 1353 1095 234 115 43 chrX 100705799 100705960 -65944336 - Tigger1 DNA MER2_type -651 1767 1607 5 1353 277 250 0 27 chrX 100706089 100706163 -65944133 + ID4_ SINE ID 12 83 0 5 1353 377 254 51 51 chrX 100706172 100706309 -65943987 - Tigger1 DNA MER2_type -940 1478 1342 5 1353 29 60 0 0 chrX 100706649 100706699 -65943597 + AT_rich Low_complexity Low_complexity 1 50 0 5 1353 420 181 12 0 chrX 100706777 100706860 -65943436 + B1_Mus2 SINE Alu 64 147 0 5 1353 228 67 0 0 chrX 100706866 100706896 -65943400 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1353 261 244 0 0 chrX 100707531 100707617 -65942679 + (TGG)n Simple_repeat Simple_repeat 1 86 0 5 1353 347 219 0 0 chrX 100707885 100707949 -65942347 - PB1D9 SINE Alu -43 77 14 5 1353 226 274 0 0 chrX 100707954 100708016 -65942280 - L1M3 LINE L1 -573 5616 5555 5 1353 317 242 97 83 chrX 100708071 100708291 -65942005 - L1_Rod LINE L1 -470 5410 5137 5 1353 462 79 0 0 chrX 100708352 100708415 -65941881 + (TTA)n Simple_repeat Simple_repeat 1 63 0 5 1353 1120 27 67 0 chrX 100708632 100708782 -65941514 + B2_Mm1a SINE B2 1 160 -33 5 1353 318 80 0 0 chrX 100708782 100708832 -65941464 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 5 1353 220 27 54 0 chrX 100708944 100708981 -65941315 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 5 1353 1126 88 0 0 chrX 100708981 100709128 -65941168 - B1_Mus1 SINE Alu -1 147 1 5 1353 701 142 307 6 chrX 100709274 100709437 -65940859 + B3 SINE B2 5 216 0 5 1353 207 139 0 0 chrX 100711280 100711316 -65938980 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 5 1353 1094 82 6 0 chrX 100711371 100711530 -65938766 + (GGAA)n Simple_repeat Simple_repeat 3 162 0 5 1353 249 33 0 0 chrX 100711861 100711891 -65938405 + (TC)n Simple_repeat Simple_repeat 2 31 0 5 1353 1188 62 0 0 chrX 100712047 100712193 -65938103 + B1_Mus1 SINE Alu 2 147 -1 5 1353 783 29 10 0 chrX 100712842 100712946 -65937350 - B1_Mus2 SINE Alu 0 147 43 5 1353 346 217 49 138 chrX 100712844 100712967 -65937329 - B4 SINE B4 -69 223 112 5 1353 502 248 30 8 chrX 100713009 100713143 -65937153 - B1F SINE Alu -2 147 11 5 1353 490 261 75 54 chrX 100713146 100713332 -65936964 + Tigger1 DNA MER2_type 2060 2249 -169 5 1353 353 229 10 20 chrX 100713424 100713522 -65936774 - L1MC LINE L1 -853 5293 5197 5 1353 290 287 40 53 chrX 100713579 100713730 -65936566 - L1MB4 LINE L1 -83 6097 5949 5 1353 3836 236 61 52 chrX 100713747 100714814 -65935482 - RMER15-int LTR ERVL -3917 1082 7 5 1353 597 206 18 42 chrX 100714824 100714991 -65935305 - RMER15 LTR ERVL -5 570 408 5 1353 354 147 0 0 chrX 100715313 100715381 -65934915 + (GA)n Simple_repeat Simple_repeat 1 68 0 5 1353 1039 76 51 0 chrX 100715486 100715644 -65934652 + B2_Mm2 SINE B2 30 195 0 5 1353 638 92 20 0 chrX 100715657 100715755 -65934541 + (GAAA)n Simple_repeat Simple_repeat 2 101 0 5 1353 773 167 79 7 chrX 100715814 100715953 -65934343 + B1_Mur4 SINE Alu 2 150 0 5 1353 366 80 0 0 chrX 100715957 100716007 -65934289 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 5 1353 277 164 73 0 chrX 100716028 100716083 -65934213 + PB1D9 SINE Alu 6 64 -56 5 1353 927 120 0 34 chrX 100717717 100717864 -65932432 + B1_Mus1 SINE Alu 3 144 -4 5 1353 213 94 0 0 chrX 100717866 100717898 -65932398 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1353 1389 75 5 16 chrX 100717898 100718087 -65932209 + B2_Mm1a SINE B2 5 191 -2 5 1353 412 290 113 65 chrX 100718391 100718701 -65931595 - MER54A LTR ERVL -7 894 458 5 1353 301 316 143 15 chrX 100718851 100719047 -65931249 - MER54A LTR ERVL -680 221 1 5 1353 407 241 23 11 chrX 100719367 100719455 -65930841 - ID_B1 SINE B4 -52 172 84 6 1353 507 235 247 23 chrX 100722072 100722246 -65928050 + B3 SINE B2 2 214 -2 6 1353 203 0 37 0 chrX 100722257 100722284 -65928012 + (CAA)n Simple_repeat Simple_repeat 2 29 0 6 1353 1252 34 0 0 chrX 100722284 100722431 -65927865 + B1_Mus1 SINE Alu 2 148 0 6 1353 400 281 35 28 chrX 100722633 100722776 -65927520 - B1F1 SINE Alu -5 144 1 6 1353 794 67 244 0 chrX 100722921 100723040 -65927256 - B1_Mus1 SINE Alu 0 148 1 6 1353 543 148 198 32 chrX 100723059 100723185 -65927111 - B1_Mur2 SINE Alu 0 149 3 6 1353 367 250 9 36 chrX 100723209 100723321 -65926975 - PB1D9 SINE Alu -3 117 9 6 1353 195 69 0 0 chrX 100723351 100723380 -65926916 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 6 1353 666 314 125 23 chrX 100723590 100723854 -65926442 - B4A SINE B4 0 292 2 6 1353 325 322 0 34 chrX 100723875 100724023 -65926273 - L1M4 LINE L1 -1195 4951 4809 6 1353 1172 68 0 7 chrX 100724065 100724212 -65926084 - B1_Mus1 SINE Alu 0 148 3 6 1353 234 0 0 0 chrX 100724589 100724615 -65925681 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1353 22 0 0 0 chrX 100725820 100725842 -65924454 + AT_rich Low_complexity Low_complexity 1 22 0 6 1353 3632 160 103 51 chrX 100726462 100726616 -65923680 + RMER19B LTR ERVK 1 158 -744 6 1353 1179 75 0 0 chrX 100726616 100726763 -65923533 + B1_Mus2 SINE Alu 1 147 0 6 1353 3632 160 103 51 chrX 100726763 100727450 -65922846 + RMER19B LTR ERVK 159 886 -16 6 1353 1591 32 5 0 chrX 100727450 100727635 -65922661 + B2_Mm1t SINE B2 2 187 -6 6 1353 490 24 60 0 chrX 100727802 100727886 -65922410 + (TG)n Simple_repeat Simple_repeat 2 90 0 6 1353 206 156 22 0 chrX 100728747 100728792 -65921504 + (CTG)n Simple_repeat Simple_repeat 3 48 0 6 1353 1230 214 117 25 chrX 100729259 100729748 -65920548 + RMER5 LTR ERV1 1 534 0 6 1353 1951 179 87 0 chrX 100729780 100730159 -65920137 - MTC LTR MaLR -9 412 1 6 1353 242 253 110 0 chrX 100730168 100730259 -65920037 - MIR SINE MIR -92 170 70 6 1353 270 320 28 30 chrX 100730521 100730639 -65919657 + B1F2 SINE Alu 1 117 -32 6 1353 297 273 26 0 chrX 100730740 100730817 -65919479 - ID SINE ID -138 86 8 6 1353 640 239 28 0 chrX 100730832 100730974 -65919322 - B1_Mus2 SINE Alu -1 146 1 6 1353 316 297 16 33 chrX 100730998 100731120 -65919176 - PB1 SINE Alu -7 120 1 6 1353 430 284 6 75 chrX 100731334 100731592 -65918704 + L1M3 LINE L1 5231 5481 -819 6 1353 257 27 54 0 chrX 100731828 100731865 -65918431 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 1353 1482 228 63 45 chrX 100731921 100732363 -65917933 - Lx6 LINE L1 -5 7455 7006 6 1353 596 265 7 0 chrX 100732454 100732590 -65917706 - B1_Mus2 SINE Alu -7 140 4 6 1353 591 174 18 18 chrX 100733104 100733215 -65917081 - RLTR14-int LTR ERV1 -1203 4114 4004 6 1353 412 194 77 10 chrX 100733215 100733231 -65917065 + B4 SINE B4 69 91 -201 6 1353 681 43 0 0 chrX 100733231 100733323 -65916973 + B1_Mus1 SINE Alu 2 93 -55 6 1353 1594 166 84 30 chrX 100733323 100733621 -65916675 - RLTR14-int LTR ERV1 -1335 3982 3669 6 1353 299 57 0 0 chrX 100733697 100733732 -65916564 - RLTR14-int LTR ERV1 -1649 3668 3634 6 1353 1324 182 40 25 chrX 100733799 100734075 -65916221 - RLTR14-int LTR ERV1 -2900 2417 2138 6 1353 1964 202 140 123 chrX 100734104 100734876 -65915420 - RLTR14-int LTR ERV1 -4325 992 208 6 1353 1186 62 0 0 chrX 100735041 100735187 -65915109 + B1_Mus1 SINE Alu 1 146 -2 6 1353 247 18 17 83 chrX 100735354 100735414 -65914882 + (TTTTTG)n Simple_repeat Simple_repeat 6 61 0 6 1353 598 112 33 0 chrX 100735414 100735519 -65914777 - B1_Mus2 SINE Alu 0 120 1 6 1353 424 223 43 0 chrX 100735439 100735533 -65914763 - B4 SINE B4 -125 167 70 6 1353 374 120 0 13 chrX 100736791 100736867 -65913429 + (TC)n Simple_repeat Simple_repeat 2 76 0 6 1353 1074 80 0 0 chrX 100736884 100737022 -65913274 - B1_Mus1 SINE Alu -10 138 1 6 1353 357 287 73 8 chrX 100737654 100737777 -65912519 - B3 SINE B2 -11 205 75 6 1353 453 116 0 0 chrX 100737812 100737881 -65912415 + (CTA)n Simple_repeat Simple_repeat 1 69 0 6 1353 1135 75 0 0 chrX 100738835 100738973 -65911323 + B1_Mus2 SINE Alu 1 138 -9 6 1353 519 0 42 0 chrX 100738973 100739044 -65911252 + (CAAAC)n Simple_repeat Simple_repeat 2 75 0 6 1353 1900 151 47 30 chrX 100739344 100739561 -65910735 - RMER17C LTR ERVK 0 410 192 6 1353 1024 72 12 23 chrX 100739561 100739732 -65910564 + (GAGAA)n Simple_repeat Simple_repeat 5 173 0 6 1353 1900 151 47 30 chrX 100739732 100739917 -65910379 - RMER17C LTR ERVK -219 191 3 6 1353 23 0 0 0 chrX 100739958 100739981 -65910315 + AT_rich Low_complexity Low_complexity 1 23 0 6 1353 1103 103 0 0 chrX 100739981 100740127 -65910169 - B1_Mm SINE Alu 0 147 2 6 1353 638 191 0 9 chrX 100740250 100740361 -65909935 + B1_Mur3 SINE Alu 32 141 -8 6 1353 276 30 0 0 chrX 100740408 100740441 -65909855 + (GA)n Simple_repeat Simple_repeat 2 34 0 6 1353 546 16 0 0 chrX 100740594 100740657 -65909639 + (TTC)n Simple_repeat Simple_repeat 2 64 0 6 1353 1153 196 57 69 chrX 100740657 100741063 -65909233 + RMER17C LTR ERVK 10 410 0 6 1353 3160 45 33 5 chrX 100741217 100741614 -65908682 - L1Md_F2 LINE L1 -12 6570 6163 6 1353 359 298 41 16 chrX 100741663 100741786 -65908510 - B1F SINE Alu -16 133 8 6 1353 21 0 0 0 chrX 100742448 100742469 -65907827 + AT_rich Low_complexity Low_complexity 1 21 0 6 1353 591 252 35 0 chrX 100742907 100743050 -65907246 + B1_Mur1 SINE Alu 2 149 0 6 1353 407 68 17 0 chrX 100743050 100743109 -65907187 + (GAAA)n Simple_repeat Simple_repeat 3 62 0 6 1353 283 319 54 24 chrX 100743255 100743422 -65906874 + HERVL74-int LTR ERVL 1794 1965 -3720 6 1353 387 0 0 0 chrX 100743429 100743472 -65906824 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1353 1022 229 76 0 chrX 100743493 100743742 -65906554 - RMER15 LTR ERVL -79 496 229 6 1353 1003 64 7 0 chrX 100743851 100743991 -65906305 - B1_Mus1 SINE Alu 0 148 8 6 1353 441 0 0 0 chrX 100744065 100744114 -65906182 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 1353 24 32 0 0 chrX 100744377 100744408 -65905888 + AT_rich Low_complexity Low_complexity 1 31 0 6 1353 1690 26 0 0 chrX 100744408 100744599 -65905697 + B2_Mm1a SINE B2 2 192 -1 6 1353 321 236 160 130 chrX 100744854 100745054 -65905242 - B4A SINE B4 -41 251 46 6 1353 254 294 18 27 chrX 100745441 100745553 -65904743 + RMER15 LTR ERVL 451 561 -14 6 1353 1115 62 14 0 chrX 100745584 100745728 -65904568 - B1_Mus1 SINE Alu -1 147 2 6 1353 233 204 23 0 chrX 100746015 100746059 -65904237 + C-rich Low_complexity Low_complexity 2 46 0 6 1353 672 278 36 41 chrX 100746064 100746285 -65904011 - ID_B1 SINE B4 -3 221 2 6 1353 186 227 0 0 chrX 100746819 100746863 -65903433 + (CACG)n Simple_repeat Simple_repeat 3 46 0 6 1353 1134 82 0 0 chrX 100747319 100747465 -65902831 - B1_Mus2 SINE Alu 0 147 2 6 1353 901 234 20 0 chrX 100748186 100748383 -65901913 - B3 SINE B2 -14 202 2 6 1353 774 168 0 32 chrX 100748826 100748980 -65901316 - B1_Mur4 SINE Alu -1 149 1 6 1353 272 316 52 17 chrX 100749059 100749175 -65901121 - MLT1C LTR MaLR -50 417 298 6 1353 440 269 34 34 chrX 100749264 100749410 -65900886 - ORR1E LTR MaLR -134 225 80 6 1353 260 340 20 20 chrX 100749903 100750005 -65900291 - ORR1E LTR MaLR -256 103 2 6 1353 448 264 21 85 chrX 100750076 100750217 -65900079 + RSINE1 SINE B4 3 134 -31 6 1353 312 27 0 0 chrX 100750229 100750266 -65900030 + (GA)n Simple_repeat Simple_repeat 1 37 0 6 1353 261 0 0 0 chrX 100750434 100750463 -65899833 + (A)n Simple_repeat Simple_repeat 1 29 0 6 1353 394 275 63 28 chrX 100752696 100752838 -65897458 + B1_Mus2 SINE Alu 1 147 0 6 1353 381 43 0 0 chrX 100753379 100753426 -65896870 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 6 1353 1170 75 0 0 chrX 100753431 100753577 -65896719 - B1_Mus1 SINE Alu 0 148 3 6 1353 370 295 129 0 chrX 100753993 100754132 -65896164 + ID_B1 SINE B4 1 157 -67 6 1353 249 33 0 0 chrX 100754170 100754200 -65896096 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1353 1303 14 0 0 chrX 100754200 100754347 -65895949 - B1_Mus2 SINE Alu 0 147 1 6 1353 382 223 0 0 chrX 100754348 100754442 -65895854 - MTD LTR MaLR -6 413 320 6 1353 363 306 66 0 chrX 100754443 100754564 -65895732 - MTD LTR MaLR -219 200 72 6 1353 550 270 141 17 chrX 100754642 100754876 -65895420 - MTC-int LTR MaLR -222 1036 774 6 1353 225 0 0 0 chrX 100754933 100754958 -65895338 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 6 1353 542 279 0 43 chrX 100755012 100755173 -65895123 - ID_B1 SINE B4 -3 221 68 6 1353 1139 55 20 20 chrX 100755622 100755770 -65894526 + B1_Mus1 SINE Alu 1 148 0 6 1353 372 138 0 0 chrX 100755771 100755836 -65894460 + (A)n Simple_repeat Simple_repeat 1 65 0 6 1353 646 174 120 8 chrX 100756411 100756544 -65893752 + B1_Mur4 SINE Alu 2 149 -1 6 1353 507 251 95 100 chrX 100756632 100756694 -65893602 + B3 SINE B2 1 55 -161 6 1353 2222 76 34 12 chrX 100756694 100757014 -65893282 + L1_Mus1 LINE L1 6241 6567 0 6 1353 507 251 95 100 chrX 100757014 100757141 -65893155 + B3 SINE B2 56 189 -27 6 1353 266 132 0 19 chrX 100757264 100757318 -65892978 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 6 1353 522 164 129 16 chrX 100757355 100757479 -65892817 + B1_Mus1 SINE Alu 5 142 -6 6 1353 417 225 70 0 chrX 100757484 100757613 -65892683 + L1MCa LINE L1 1006 1143 -5365 6 1353 559 322 12 12 chrX 100757628 100757801 -65892495 + B3A SINE B2 10 182 -16 6 1353 1113 95 0 0 chrX 100757923 100758071 -65892225 + B1_Mus1 SINE Alu 1 148 0 6 1353 207 0 0 0 chrX 100758071 100758094 -65892202 + (GAAAA)n Simple_repeat Simple_repeat 1 23 0 6 1353 236 228 145 68 chrX 100758095 100758330 -65891966 + L1MCa LINE L1 1247 1499 -5009 6 1353 718 126 33 5 chrX 100758530 100758665 -65891631 - B1_Mur4 SINE Alu -15 135 1 6 1353 230 0 33 0 chrX 100759451 100759481 -65890815 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1353 304 338 29 0 chrX 100759517 100759653 -65890643 - B3 SINE B2 -4 212 73 7 1353 553 289 66 10 chrX 100759703 100759958 -65890338 + L1M3e LINE L1 1858 2128 -4899 7 1353 1447 183 154 3 chrX 100760690 100761002 -65889294 - L1_Mur2 LINE L1 -199 5678 5320 7 1353 220 359 13 0 chrX 100761281 100761359 -65888937 + B1F SINE Alu 37 115 -34 7 1353 229 309 21 0 chrX 100761473 100761567 -65888729 + L1M3e LINE L1 3210 3305 -3795 7 1353 1192 250 86 16 chrX 100761645 100762205 -65888091 + L1M3e LINE L1 3515 4113 -2990 7 1353 233 154 19 0 chrX 100762268 100762320 -65887976 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1353 276 310 51 8 chrX 100762323 100762440 -65887856 - ID_B1 SINE B4 -7 217 96 7 1353 254 200 0 35 chrX 100762487 100762544 -65887752 + L1M3e LINE L1 4457 4511 -2592 7 1353 485 237 134 20 chrX 100762596 100762798 -65887498 + L1M3e LINE L1 4661 4885 -2215 7 1353 255 297 19 14 chrX 100762837 100762960 -65887336 + L1M3e LINE L1 4981 5105 -1995 7 1353 235 264 0 83 chrX 100763010 100763142 -65887154 + RMER17C LTR ERVK 142 262 -148 7 1353 277 333 0 61 chrX 100763564 100763663 -65886633 - B3 SINE B2 -8 208 116 7 1353 239 268 131 17 chrX 100764116 100764291 -65886005 + L1M3e LINE L1 5949 6143 -960 7 1353 230 209 14 82 chrX 100764359 100764432 -65885864 + B3A SINE B2 72 139 -59 7 1353 232 292 24 41 chrX 100764566 100764729 -65885567 + L1ME1 LINE L1 5846 6010 -154 7 1353 339 324 27 0 chrX 100767268 100767379 -65882917 + B1_Mur2 SINE Alu 15 128 -21 7 1353 570 274 30 15 chrX 100767544 100767744 -65882552 + ORR1E LTR MaLR 1 203 -156 7 1353 353 214 136 58 chrX 100768296 100768450 -65881846 - L2c LINE L2 0 3387 3222 7 1353 415 269 0 25 chrX 100769147 100769265 -65881031 - PB1D10 SINE Alu -2 115 1 7 1353 399 141 0 49 chrX 100770263 100770345 -65879951 - B1_Mur3 SINE Alu -2 147 70 7 1353 1196 41 7 0 chrX 100770846 100770991 -65879305 + B1_Mus2 SINE Alu 2 147 0 7 1353 343 52 17 17 chrX 100770991 100771050 -65879246 + (CAAAA)n Simple_repeat Simple_repeat 1 59 0 7 1353 223 239 0 0 chrX 100771069 100771115 -65879181 + ID4_ SINE ID 28 73 -10 7 1353 660 194 15 0 chrX 100771773 100771907 -65878389 - B1_Mus2 SINE Alu 0 147 12 7 1353 1089 96 0 0 chrX 100773070 100773216 -65877080 + B1_Mus1 SINE Alu 2 147 -1 7 1353 432 0 0 0 chrX 100773216 100773264 -65877032 + (CATA)n Simple_repeat Simple_repeat 2 49 0 7 1353 25 0 0 0 chrX 100773289 100773314 -65876982 + AT_rich Low_complexity Low_complexity 1 25 0 7 1353 251 275 27 55 chrX 100773855 100773928 -65876368 - RSINE1 SINE B4 0 165 95 7 1353 284 304 0 50 chrX 100775040 100775161 -65875135 + PB1D9 SINE Alu 1 115 -5 7 1353 922 202 126 0 chrX 100776093 100776291 -65874005 - URR1B DNA MER1_type 0 225 3 7 1353 595 13 13 0 chrX 100776845 100776924 -65873372 - B1_Mm SINE Alu 0 147 68 7 1353 243 283 28 92 chrX 100777747 100777856 -65872440 + MT2B LTR ERVL 156 257 -344 7 1353 670 215 15 0 chrX 100777758 100777888 -65872408 + B1_Mur2 SINE Alu 6 137 -12 7 1353 316 237 220 24 chrX 100778240 100778448 -65871848 + L1MB4 LINE L1 5689 5919 -245 7 1353 330 296 87 0 chrX 100778670 100778785 -65871511 + B1F1 SINE Alu 5 129 -20 7 1353 180 0 0 0 chrX 100779068 100779088 -65871208 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 7 1353 1172 61 0 20 chrX 100779146 100779296 -65871000 - B1_Mus1 SINE Alu 0 148 2 7 1353 22 0 0 0 chrX 100779296 100779318 -65870978 + AT_rich Low_complexity Low_complexity 1 22 0 7 1353 253 43 261 0 chrX 100780118 100780164 -65870132 + B1_Mus2 SINE Alu 90 147 0 7 1353 1374 78 39 0 chrX 100780846 100781026 -65869270 + B2_Mm2 SINE B2 2 188 -7 7 1353 26 0 0 0 chrX 100781030 100781056 -65869240 + AT_rich Low_complexity Low_complexity 1 26 0 7 1353 224 314 23 0 chrX 100781075 100781161 -65869135 + PB1D10 SINE Alu 17 104 -13 7 1353 223 257 0 157 chrX 100781319 100781402 -65868894 + ID4 SINE ID 11 80 -3 7 1353 280 326 50 0 chrX 100781449 100781590 -65868706 + RSINE1 SINE B4 14 161 -4 7 1353 744 115 0 0 chrX 100781616 100781729 -65868567 + (TC)n Simple_repeat Simple_repeat 2 114 0 7 1353 1046 85 7 0 chrX 100781731 100781872 -65868424 - B1_Mus2 SINE Alu -5 142 1 7 1353 245 338 28 62 chrX 100781943 100782088 -65868208 + B4A SINE B4 1 140 -152 7 1353 495 73 0 0 chrX 100782193 100782261 -65868035 + (CA)n Simple_repeat Simple_repeat 2 69 0 7 1353 236 322 67 22 chrX 100782962 100783051 -65867245 + Charlie8 DNA MER1_type 133 225 -2203 7 1353 1739 16 0 0 chrX 100783056 100783248 -65867048 - B2_Mm1a SINE B2 0 193 2 7 1353 447 19 0 0 chrX 100783390 100783442 -65866854 + (GA)n Simple_repeat Simple_repeat 1 52 0 7 1353 324 264 121 11 chrX 100784184 100784300 -65865996 + PB1D10 SINE Alu 12 121 -26 7 1353 308 358 24 0 chrX 100784411 100784534 -65865762 + B1F1 SINE Alu 7 132 -17 7 1353 191 107 0 82 chrX 100784537 100784598 -65865698 + A-rich Low_complexity Low_complexity 2 57 0 7 1353 243 300 0 0 chrX 100784655 100784715 -65865581 - ID SINE ID -157 67 8 7 1353 1296 71 60 0 chrX 100784749 100784931 -65865365 - B2_Mm2 SINE B2 -2 193 1 7 1353 210 314 51 103 chrX 100785521 100785599 -65864697 + PB1D10 SINE Alu 8 81 -36 7 1353 183 100 0 0 chrX 100785882 100785912 -65864384 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 1353 534 283 47 94 chrX 100786037 100786271 -65864025 + ID_B1 SINE B4 2 224 0 7 1353 479 234 380 11 chrX 100787134 100787397 -65862899 + MTD LTR MaLR 40 399 -20 7 1353 348 264 184 0 chrX 100787598 100787723 -65862573 + B1F SINE Alu 1 148 -1 7 1353 356 154 0 15 chrX 100787770 100787836 -65862460 + B3A SINE B2 1 65 -133 7 1353 240 305 48 12 chrX 100788024 100788107 -65862189 + MER58A DNA MER1_type 50 135 -89 7 1353 606 254 86 20 chrX 100788324 100788521 -65861775 + B3 SINE B2 7 216 0 7 1353 235 147 0 42 chrX 100788680 100788751 -65861545 + A-rich Low_complexity Low_complexity 1 68 0 7 1353 1137 43 0 0 chrX 100788956 100789094 -65861202 + B1_Mus2 SINE Alu 1 138 -9 7 1353 341 22 0 21 chrX 100789094 100789141 -65861155 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 7 1353 325 304 10 19 chrX 100789221 100789325 -65860971 + PB1D10 SINE Alu 10 112 -5 7 1353 256 293 20 20 chrX 100789456 100789557 -65860739 + B1F SINE Alu 49 149 0 7 1353 1159 49 14 0 chrX 100789880 100790024 -65860272 + B1_Mus1 SINE Alu 2 147 -1 7 1353 263 299 70 30 chrX 100790387 100790487 -65859809 - B1F1 SINE Alu -13 104 1 7 1353 293 231 165 0 chrX 100791142 100791233 -65859063 - PB1D10 SINE Alu -6 111 6 7 1353 310 329 79 35 chrX 100791450 100791677 -65858619 + ORR1E LTR MaLR 65 301 -58 7 1353 226 204 19 0 chrX 100791826 100791880 -65858416 + ID_B1 SINE B4 169 223 -1 7 1353 799 224 29 10 chrX 100791990 100792197 -65858099 + B3 SINE B2 2 212 -4 7 1353 1178 55 7 0 chrX 100792202 100792348 -65857948 + B1_Mus1 SINE Alu 1 147 -1 7 1353 186 71 0 0 chrX 100792349 100792377 -65857919 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 7 1353 192 182 0 0 chrX 100792374 100792418 -65857878 + GA-rich Low_complexity Low_complexity 2 45 0 7 1353 721 191 14 14 chrX 100792428 100792571 -65857725 + Lx9 LINE L1 7283 7425 -219 7 1353 432 0 0 0 chrX 100792591 100792639 -65857657 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 1353 424 273 166 24 chrX 100792639 100792798 -65857498 + B3 SINE B2 36 198 0 7 1353 209 116 70 0 chrX 100792798 100792841 -65857455 + A-rich Low_complexity Low_complexity 3 48 0 7 1353 324 218 62 26 chrX 100792841 100792954 -65857342 + PB1D10 SINE Alu 1 117 0 7 1353 413 69 126 4 chrX 100792958 100793048 -65857248 + B1_Mus2 SINE Alu 2 147 0 7 1353 1373 77 38 16 chrX 100794026 100794212 -65856084 + B2_Mm2 SINE B2 1 190 -5 7 1353 300 214 0 0 chrX 100794230 100794286 -65856010 + B1F SINE Alu 1 56 -93 7 169 389 327 77 59 chrX 100794290 100794563 -65855733 + B4 SINE B4 15 292 0 7 1354 1144 102 0 0 chrX 100794614 100794761 -65855535 + B1_Mus1 SINE Alu 2 148 0 7 1354 208 28 54 27 chrX 100794763 100794800 -65855496 + (CAAAAA)n Simple_repeat Simple_repeat 2 39 0 7 1354 210 254 130 29 chrX 100794865 100794934 -65855362 + PB1D7 SINE Alu 36 111 -9 7 1354 297 286 146 29 chrX 100795146 100795283 -65855013 - RSINE1 SINE B4 0 165 13 7 1354 555 214 75 15 chrX 100795408 100795541 -65854755 - B1_Mur1 SINE Alu -7 142 2 7 1354 1277 113 5 21 chrX 100795884 100796074 -65854222 + B2_Mm1t SINE B2 1 187 -6 7 1354 1178 62 7 0 chrX 100796095 100796241 -65854055 + B1_Mus1 SINE Alu 1 147 -1 7 1354 207 0 0 0 chrX 100796249 100796272 -65854024 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 7 1354 728 277 86 15 chrX 100796315 100796513 -65853783 + B3 SINE B2 5 216 0 7 1354 319 244 32 43 chrX 100796865 100796959 -65853337 - B4A SINE B4 -12 280 188 7 1354 471 287 107 13 chrX 100797061 100797220 -65853076 - B3A SINE B2 -24 174 1 7 1354 218 308 0 0 chrX 100797220 100797271 -65853025 - B4A SINE B4 -196 96 46 7 1354 347 267 34 82 chrX 100797401 100797430 -65852866 + B1F1 SINE Alu 2 141 -8 7 1354 380 230 17 42 chrX 100797430 100797548 -65852748 + ID_B1 SINE B4 102 216 -8 7 1354 219 191 0 21 chrX 100797552 100797600 -65852696 + CT-rich Low_complexity Low_complexity 2 48 0 7 1354 1251 93 17 11 chrX 100797600 100797774 -65852522 - B2_Mm2 SINE B2 -17 178 4 7 1354 373 191 544 0 chrX 100797829 100797965 -65852331 + B3 SINE B2 4 213 -3 7 1354 327 219 0 30 chrX 100798077 100798143 -65852153 + ID4_ SINE ID 15 78 -5 7 1354 270 256 12 71 chrX 100798143 100798161 -65852135 + ID_B1 SINE B4 15 93 -131 7 1354 287 173 46 69 chrX 100798315 100798402 -65851894 - MTE2a LTR MaLR -17 362 278 8 1354 516 209 123 8 chrX 100798648 100798778 -65851518 + B1_Mur3 SINE Alu 5 149 0 8 1354 234 244 0 0 chrX 100798855 100798900 -65851396 + PB1 SINE Alu 60 104 -23 8 1354 525 231 76 8 chrX 100799197 100799328 -65850968 + B1F2 SINE Alu 2 141 -8 8 1354 230 275 45 27 chrX 100799479 100799591 -65850705 - PB1D10 SINE Alu 0 117 4 8 1354 626 167 71 82 chrX 100799629 100799812 -65850484 - B2_Mm2 SINE B2 -14 181 1 8 1354 1187 55 7 0 chrX 100799839 100799985 -65850311 - B1_Mus2 SINE Alu 0 147 1 8 1354 369 262 58 10 chrX 100801060 100801164 -65849132 - PB1D10 SINE Alu -8 109 1 8 1354 1166 130 15 25 chrX 100801319 100801516 -65848780 - B2_Mm2 SINE B2 0 195 1 8 1354 201 158 0 26 chrX 100801782 100801821 -65848475 + MER5A DNA MER1_type 122 159 -30 8 1354 357 256 46 2 chrX 100801889 100802015 -65848281 + B1F SINE Alu 3 130 -17 8 1354 1104 107 39 17 chrX 100802594 100802775 -65847521 - B2_Mm2 SINE B2 -9 186 2 8 1354 246 174 0 0 chrX 100802959 100803005 -65847291 + B1F1 SINE Alu 11 56 -93 8 1354 306 0 0 0 chrX 100804009 100804043 -65846253 + (TA)n Simple_repeat Simple_repeat 2 35 0 8 1354 1190 94 53 0 chrX 100804067 100804237 -65846059 + B2_Mm2 SINE B2 2 180 -15 8 1354 1213 48 7 0 chrX 100804237 100804382 -65845914 + B1_Mus2 SINE Alu 2 147 0 8 1354 239 0 32 0 chrX 100804395 100804426 -65845870 + (CAA)n Simple_repeat Simple_repeat 2 33 0 8 1354 280 250 48 111 chrX 100805214 100805340 -65844956 - PB1 SINE Alu -3 124 7 8 1354 475 103 45 22 chrX 100805653 100805742 -65844554 - B1_Mm SINE Alu -56 91 1 8 1354 571 231 0 17 chrX 100806205 100806324 -65843972 - B1_Mur1 SINE Alu -7 142 26 8 1354 234 43 62 21 chrX 100806636 100806684 -65843612 + (TTTTTG)n Simple_repeat Simple_repeat 3 52 0 8 1354 886 66 0 0 chrX 100806687 100806808 -65843488 - B1_Mus1 SINE Alu 0 148 28 8 1354 201 176 0 0 chrX 100807663 100807697 -65842599 + T-rich Low_complexity Low_complexity 2 35 0 8 1354 315 113 0 0 chrX 100807787 100807840 -65842456 + (CAGA)n Simple_repeat Simple_repeat 3 55 0 8 1354 611 68 23 0 chrX 100807840 100807928 -65842368 + (GGGA)n Simple_repeat Simple_repeat 3 92 0 8 1354 367 240 62 10 chrX 100807932 100808029 -65842267 - RSINE1 SINE B4 -33 132 31 8 1354 900 74 0 0 chrX 100808114 100808236 -65842060 - B1_Mus1 SINE Alu 0 148 27 8 1354 496 61 0 180 chrX 100808582 100808632 -65841664 + B1_Mur4 SINE Alu 69 118 -32 8 1354 1281 91 21 31 chrX 100808632 100808825 -65841471 + B2_Mm1t SINE B2 1 191 -2 8 1354 496 61 0 180 chrX 100808825 100808874 -65841422 + B1_Mur4 SINE Alu 119 150 0 8 1354 204 97 0 0 chrX 100808874 100808905 -65841391 + (A)n Simple_repeat Simple_repeat 1 31 0 8 1354 188 35 35 0 chrX 100808912 100808941 -65841355 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 8 1354 410 184 90 20 chrX 100809039 100809139 -65841157 + B1_Mur3 SINE Alu 43 149 0 8 1354 23 0 0 0 chrX 100809144 100809167 -65841129 + AT_rich Low_complexity Low_complexity 1 23 0 8 1354 757 169 139 16 chrX 100809175 100809362 -65840934 + B3 SINE B2 1 210 -6 8 1354 399 202 37 46 chrX 100809393 100809502 -65840794 + PB1D10 SINE Alu 2 109 -8 8 1354 394 167 39 0 chrX 100809597 100809675 -65840621 + B1_Mur3 SINE Alu 68 148 -1 8 1354 314 239 47 0 chrX 100809788 100809876 -65840420 - PB1D7 SINE Alu -17 103 12 8 1354 190 244 127 13 chrX 100810830 100810909 -65839387 - L2c LINE L2 -2 3385 3298 8 1354 359 284 51 17 chrX 100811414 100811532 -65838764 + B1F SINE Alu 21 142 -7 8 1354 258 192 0 0 chrX 100811656 100811708 -65838588 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 1354 214 148 36 18 chrX 100812270 100812325 -65837971 + (CGGG)n Simple_repeat Simple_repeat 3 58 0 8 1354 189 74 0 0 chrX 100812657 100812684 -65837612 + (G)n Simple_repeat Simple_repeat 1 27 0 8 1354 225 0 0 0 chrX 100813447 100813472 -65836824 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 8 1354 412 196 119 64 chrX 100813490 100813599 -65836697 - PB1D10 SINE Alu -2 115 1 8 1354 271 315 33 90 chrX 100813606 100813728 -65836568 - PB1D10 SINE Alu -2 115 1 8 1354 554 248 24 34 chrX 100813728 100813815 -65836481 - ID SINE ID -140 84 3 8 1354 231 272 123 0 chrX 100813886 100813967 -65836329 - RSINE1 SINE B4 -31 134 44 8 1354 234 0 0 0 chrX 100814407 100814433 -65835863 + (CAA)n Simple_repeat Simple_repeat 2 27 0 8 1354 263 298 54 39 chrX 100814444 100814573 -65835723 + RSINE1 SINE B4 20 150 -15 8 1354 22 35 0 0 chrX 100814585 100814614 -65835682 + AT_rich Low_complexity Low_complexity 1 29 0 8 1354 1223 7 0 0 chrX 100814624 100814767 -65835529 + L1Md_A LINE L1 6440 6582 0 8 1354 1453 84 11 0 chrX 100814783 100814973 -65835323 + B2_Mm1t SINE B2 2 193 0 8 1354 946 97 30 0 chrX 100815525 100815659 -65834637 + B1_Mus1 SINE Alu 1 138 -10 8 1354 277 248 78 17 chrX 100815741 100815856 -65834440 + L1M5 LINE L1 5545 5666 -458 8 1354 2678 22 13 3 chrX 100816008 100816325 -65833971 + L1Md_F3 LINE L1 6265 6584 0 8 1354 187 324 87 81 chrX 100816655 100816816 -65833480 + MIR SINE MIR 80 241 -21 8 1354 345 66 49 0 chrX 100818044 100818105 -65832191 + (TA)n Simple_repeat Simple_repeat 1 64 0 8 1354 216 158 0 0 chrX 100818156 100818194 -65832102 + (TA)n Simple_repeat Simple_repeat 2 39 0 8 1354 210 268 89 40 chrX 100818427 100818446 -65831850 + B4 SINE B4 67 126 -166 8 1354 303 186 157 0 chrX 100818446 100818516 -65831780 + PB1D7 SINE Alu 1 81 -39 8 1354 210 268 89 40 chrX 100818516 100818528 -65831768 + B4 SINE B4 127 172 -120 8 1354 208 121 0 0 chrX 100819409 100819442 -65830854 + (CCAA)n Simple_repeat Simple_repeat 2 34 0 8 1354 289 188 25 0 chrX 100819881 100819961 -65830335 + GA-rich Low_complexity Low_complexity 1 82 0 8 1354 1273 106 16 11 chrX 100820330 100820521 -65829775 + B2_Mm2 SINE B2 2 193 -2 8 1354 688 225 141 11 chrX 100820757 100820941 -65829355 + ID_B1 SINE B4 1 208 -16 8 1354 231 133 0 0 chrX 100820946 100820991 -65829305 + (GA)n Simple_repeat Simple_repeat 2 46 0 8 1354 1338 105 26 10 chrX 100820991 100821183 -65829113 + B2_Mm2 SINE B2 1 195 0 8 1354 1392 56 0 0 chrX 100821203 100821381 -65828915 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 8 1354 539 214 14 100 chrX 100821452 100821500 -65828796 + B1F SINE Alu 22 62 -87 8 1354 1050 70 0 47 chrX 100821500 100821649 -65828647 - B1_Mus1 SINE Alu -5 143 2 8 1354 539 214 14 100 chrX 100821649 100821740 -65828556 + B1F SINE Alu 63 149 0 8 1354 778 121 15 15 chrX 100821758 100821881 -65828415 + B1_Mur4 SINE Alu 16 139 -11 8 1354 1125 62 7 7 chrX 100821881 100822027 -65828269 + B1_Mus1 SINE Alu 3 148 0 8 1354 200 204 0 0 chrX 100822040 100822089 -65828207 + A-rich Low_complexity Low_complexity 1 49 0 8 1354 320 263 17 146 chrX 100822538 100822716 -65827580 + B4A SINE B4 138 292 0 8 1354 453 198 0 0 chrX 100822723 100822834 -65827462 + (CA)n Simple_repeat Simple_repeat 2 112 0 8 1354 21 0 0 0 chrX 100822834 100822855 -65827441 + AT_rich Low_complexity Low_complexity 1 21 0 8 1354 393 277 0 0 chrX 100822858 100822941 -65827355 + ID4 SINE ID 1 83 0 8 1354 821 175 0 6 chrX 100822941 100823108 -65827188 + GA-rich Low_complexity Low_complexity 1 166 0 8 1354 1358 82 11 0 chrX 100823130 100823312 -65826984 + B2_Mm1t SINE B2 1 184 -9 8 1354 3175 118 25 25 chrX 100823371 100823882 -65826414 - Lx LINE L1 0 6654 6144 8 1354 192 179 0 0 chrX 100824061 100824100 -65826196 + (CATA)n Simple_repeat Simple_repeat 4 42 0 8 1354 419 292 38 120 chrX 100824237 100824335 -65825961 + ID SINE ID 3 85 -139 8 1354 276 291 68 0 chrX 100824335 100824438 -65825858 + PB1D10 SINE Alu 1 110 -7 8 1354 860 104 0 0 chrX 100824450 100824575 -65825721 + B2_Mm2 SINE B2 4 128 -67 8 1354 35 0 0 0 chrX 100824870 100824905 -65825391 + AT_rich Low_complexity Low_complexity 1 35 0 8 1354 526 81 0 66 chrX 100824905 100825011 -65825285 - L1_Mus3 LINE L1 0 6638 6540 8 1354 281 211 0 112 chrX 100825065 100825145 -65825151 + ID_B1 SINE B4 81 151 -73 8 1354 216 336 15 88 chrX 100825066 100825203 -65825093 + PB1 SINE Alu 1 127 0 8 1354 220 246 17 17 chrX 100825240 100825298 -65824998 + B1F1 SINE Alu 83 140 -9 8 1354 224 125 25 0 chrX 100825400 100825440 -65824856 - B1F2 SINE Alu -103 46 6 8 1354 256 375 0 0 chrX 100825552 100825648 -65824648 + PB1D10 SINE Alu 1 96 -21 8 1354 206 116 0 23 chrX 100825668 100825712 -65824584 + (CTAAA)n Simple_repeat Simple_repeat 3 45 0 8 1354 581 65 0 0 chrX 100825725 100825802 -65824494 + B1_Mus2 SINE Alu 5 81 -66 8 1354 198 0 0 0 chrX 100825816 100825838 -65824458 + (A)n Simple_repeat Simple_repeat 1 22 0 8 1354 1199 61 0 0 chrX 100827136 100827283 -65823013 + B1_Mus2 SINE Alu 1 147 0 8 1354 286 288 0 0 chrX 100827327 100827386 -65822910 - PB1D7 SINE Alu -61 59 1 8 1354 265 300 86 65 chrX 100827451 100827590 -65822706 + RSINE1 SINE B4 17 158 -7 8 1354 775 190 14 0 chrX 100827659 100827801 -65822495 - B1F2 SINE Alu 0 149 6 8 1354 22 0 0 0 chrX 100827915 100827937 -65822359 + AT_rich Low_complexity Low_complexity 1 22 0 8 1354 932 199 42 37 chrX 100827950 100828164 -65822132 - B3 SINE B2 0 216 2 8 1354 253 279 114 9 chrX 100828243 100828348 -65821948 - B3A SINE B2 -82 116 1 8 1354 887 58 16 0 chrX 100828554 100828675 -65821621 - B1_Mm SINE Alu -10 137 15 8 1354 893 83 0 139 chrX 100828685 100828881 -65821415 - B2_Mm2 SINE B2 -8 187 27 9 1354 910 83 0 157 chrX 100828881 100828894 -65821402 - B1_Mus2 SINE Alu 0 147 137 9 1354 906 84 21 0 chrX 100828894 100829036 -65821260 + (TTC)n Simple_repeat Simple_repeat 2 146 0 9 1354 910 83 0 157 chrX 100829036 100829194 -65821102 - B1_Mus2 SINE Alu -11 136 3 9 1354 740 132 0 229 chrX 100829194 100829233 -65821063 - B2_Mm1t SINE B2 -159 34 4 9 1354 523 244 4 4 chrX 100829246 100829480 -65820816 + CT-rich Low_complexity Low_complexity 1 234 0 9 1354 391 241 0 12 chrX 100829799 100829883 -65820413 + ID4_ SINE ID 1 83 0 9 1354 248 306 28 0 chrX 100830341 100830413 -65819883 + MER102b DNA MER1_type 37 110 -231 9 1354 380 319 16 115 chrX 100830420 100830586 -65819710 + ID_B1 SINE B4 4 223 -1 9 1354 393 179 51 0 chrX 100830586 100830664 -65819632 + B1F1 SINE Alu 67 148 -1 9 1354 984 252 104 50 chrX 100830938 100831255 -65819041 - Lx8 LINE L1 -76 7397 7064 9 1354 531 136 18 9 chrX 100831299 100831410 -65818886 + GA-rich Low_complexity Low_complexity 1 112 0 9 1354 494 268 55 0 chrX 100831413 100831540 -65818756 - RSINE1 SINE B4 -24 141 8 9 1354 229 241 34 17 chrX 100831698 100831757 -65818539 - ID4_ SINE ID -2 81 22 9 1354 518 0 16 0 chrX 100832511 100832573 -65817723 + (CA)n Simple_repeat Simple_repeat 2 64 0 9 1354 258 32 0 0 chrX 100832684 100832715 -65817581 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 1354 284 185 0 32 chrX 100833817 100833912 -65816384 - RMER17C LTR ERVK -148 262 171 9 1354 427 234 9 36 chrX 100834951 100835062 -65815234 - B1F1 SINE Alu 0 149 42 9 1354 237 98 58 47 chrX 100835217 100835303 -65814993 + (TTTG)n Simple_repeat Simple_repeat 2 88 0 9 1354 688 149 0 0 chrX 100835319 100835433 -65814863 - B1_Mur4 SINE Alu 0 150 37 9 1354 423 0 0 0 chrX 100835434 100835481 -65814815 + (TC)n Simple_repeat Simple_repeat 2 48 0 9 1354 258 266 51 0 chrX 100835511 100835590 -65814706 - ID_B1 SINE B4 0 224 142 9 1354 470 262 62 58 chrX 100835603 100835766 -65814530 - MER2 DNA MER2_type -101 244 86 9 1354 1443 23 81 0 chrX 100835766 100835779 -65814517 - B2_Mm1t SINE B2 -5 188 176 9 1354 423 0 0 0 chrX 100835779 100835826 -65814470 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 9 1354 1443 23 81 0 chrX 100835826 100835986 -65814310 - B2_Mm1t SINE B2 -18 175 2 9 1354 470 262 62 58 chrX 100835986 100836065 -65814231 - MER2 DNA MER2_type -260 85 1 9 1354 1275 28 0 0 chrX 100836164 100836309 -65813987 - B1_Mus1 SINE Alu 0 148 4 9 1354 231 36 0 0 chrX 100836309 100836337 -65813959 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 9 1354 1144 117 40 17 chrX 100836338 100836512 -65813784 - B2_Mm2 SINE B2 -16 179 2 9 1354 461 171 279 0 chrX 100836544 100836673 -65813623 + URR1B DNA MER1_type 1 165 -60 9 1354 721 109 11 23 chrX 100836744 100836857 -65813439 + B1_Mur2 SINE Alu 20 136 -13 9 1354 183 42 0 0 chrX 100836857 100836881 -65813415 + (CAAAG)n Simple_repeat Simple_repeat 1 24 0 9 1354 721 108 8 24 chrX 100836881 100836896 -65813400 + B1_Mur2 SINE Alu 137 149 0 9 1354 248 276 69 23 chrX 100836913 100837043 -65813253 + L1MC3 LINE L1 7619 7754 -31 9 1354 273 202 0 56 chrX 100837081 100837152 -65813144 + PB1D7 SINE Alu 62 120 0 9 1354 522 0 0 0 chrX 100837267 100837325 -65812971 + (TTCC)n Simple_repeat Simple_repeat 4 61 0 9 1354 252 0 0 0 chrX 100837325 100837353 -65812943 + (TC)n Simple_repeat Simple_repeat 2 29 0 9 1354 183 42 0 0 chrX 100837374 100837398 -65812898 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 1354 734 129 0 16 chrX 100837398 100837515 -65812781 - B1_Mur3 SINE Alu -11 138 23 9 1354 356 291 12 129 chrX 100837515 100837543 -65812753 - ID_B1 SINE B4 -11 213 92 9 1354 282 73 0 0 chrX 100837543 100837584 -65812712 + (CAAA)n Simple_repeat Simple_repeat 3 43 0 9 1354 356 291 12 129 chrX 100837584 100837679 -65812617 - ID_B1 SINE B4 -133 91 1 9 1354 1415 60 10 42 chrX 100837832 100838024 -65812272 - B2_Mm2 SINE B2 -9 186 1 9 1354 210 37 0 0 chrX 100838405 100838432 -65811864 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 1354 1393 79 17 0 chrX 100838432 100838610 -65811686 - B2_Mm2 SINE B2 -14 181 1 9 1354 1307 109 5 0 chrX 100838613 100838805 -65811491 - B2_Mm2 SINE B2 -2 193 1 9 1354 1731 172 15 87 chrX 100839086 100839487 -65810809 - RLTR14 LTR ERV1 0 382 11 9 1354 1231 61 0 0 chrX 100839531 100839678 -65810618 + B1_Mus1 SINE Alu 2 148 0 9 1354 197 0 0 67 chrX 100839679 100839709 -65810587 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 9 1354 351 260 39 0 chrX 100840125 100840202 -65810094 - ID4_ SINE ID -2 81 2 9 1354 353 332 36 24 chrX 100840280 100840530 -65809766 + L1M5 LINE L1 5546 5798 -326 9 1354 431 170 87 39 chrX 100840530 100840634 -65809662 + PB1D7 SINE Alu 12 120 0 9 1354 960 95 0 0 chrX 100840867 100841004 -65809292 + (CCCTG)n Simple_repeat Simple_repeat 2 138 0 9 1354 780 11 0 0 chrX 100841004 100841092 -65809204 + (TCTCC)n Simple_repeat Simple_repeat 2 90 0 9 1354 744 216 0 0 chrX 100841092 100841231 -65809065 - B1_Mur3 SINE Alu -10 139 1 9 1354 2772 76 0 98 chrX 100841447 100841884 -65808412 + L1_Mus2 LINE L1 6159 6552 -14 9 1354 186 43 0 0 chrX 100841899 100841922 -65808374 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 9 1354 293 263 54 12 chrX 100842310 100842394 -65807902 - B1_Mur3 SINE Alu -226 88 1 9 1354 1253 75 34 6 chrX 100842730 100842905 -65807391 + B2_Mm2 SINE B2 1 180 -15 9 1354 1219 35 0 0 chrX 100842905 100843047 -65807249 + B1_Mus1 SINE Alu 2 143 -5 9 1354 180 0 0 0 chrX 100843050 100843070 -65807226 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 9 1354 570 98 0 0 chrX 100843078 100843160 -65807136 + (GGAA)n Simple_repeat Simple_repeat 3 84 0 9 1354 264 160 0 0 chrX 100843359 100843388 -65806908 + polypyrimidine Low_complexity Low_complexity 23 51 0 9 1354 740 31 31 0 chrX 100843388 100843485 -65806811 + (TTTTC)n Simple_repeat Simple_repeat 3 102 0 9 1354 264 160 0 0 chrX 100843485 100843505 -65806791 + polypyrimidine Low_complexity Low_complexity 3 22 0 9 1354 326 322 131 46 chrX 100843954 100844252 -65806044 + MER31A LTR ERV1 1 334 -132 9 1354 1458 59 32 11 chrX 100844872 100845061 -65805235 - B2_Mm2 SINE B2 -1 194 2 9 1354 245 316 90 20 chrX 100845062 100845162 -65805134 - PB1D9 SINE Alu -1 119 13 9 1354 411 38 0 0 chrX 100845229 100845282 -65805014 + (TG)n Simple_repeat Simple_repeat 1 53 0 9 1354 918 134 177 0 chrX 100845417 100845603 -65804693 - URR1B DNA MER1_type -1 224 6 9 1354 816 234 38 5 chrX 100845604 100845789 -65804507 - ID_B1 SINE B4 0 224 34 9 1354 850 68 0 0 chrX 100845815 100845932 -65804364 - B1_Mus1 SINE Alu 0 148 32 9 1354 567 271 0 0 chrX 100845946 100846068 -65804228 - RSINE1 SINE B4 -41 124 3 9 1354 789 155 0 58 chrX 100846097 100846234 -65804062 - B1_Mm SINE Alu -17 130 2 9 1354 569 237 59 0 chrX 100846258 100846393 -65803903 - B1_Mur2 SINE Alu 0 149 7 9 1354 1137 88 0 0 chrX 100846412 100846559 -65803737 - B1_Mm SINE Alu 0 147 1 9 1354 1455 79 26 0 chrX 100846797 100846986 -65803310 + B2_Mm2 SINE B2 2 195 0 9 1354 271 353 22 76 chrX 100846989 100847094 -65803202 + L2 LINE L2 2749 2846 -573 9 1354 1098 156 66 225 chrX 100847094 100847582 -65802714 - RMER17C LTR ERVK 0 410 1 9 1354 271 353 22 76 chrX 100847582 100847700 -65802596 + L2 LINE L2 2847 2960 -459 9 1354 237 83 0 0 chrX 100848168 100848204 -65802092 + (TTTTTG)n Simple_repeat Simple_repeat 6 41 0 9 1354 851 163 0 20 chrX 100848204 100848354 -65801942 - B1_Mus1 SINE Alu 0 148 2 9 1354 391 214 73 73 chrX 100848357 100848493 -65801803 - MER31B LTR ERV1 -232 234 99 9 1354 452 170 214 0 chrX 100848508 100848620 -65801676 + MER31A LTR ERV1 6 141 -344 9 1354 529 298 41 29 chrX 100848673 100848918 -65801378 + MER31A LTR ERV1 232 479 -6 9 1354 195 42 0 0 chrX 100848919 100848943 -65801353 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1354 519 165 48 24 chrX 100849056 100849180 -65801116 + B1_Mus2 SINE Alu 1 127 -20 9 1354 183 100 0 0 chrX 100849180 100849210 -65801086 + (GA)n Simple_repeat Simple_repeat 2 31 0 9 1354 262 88 51 34 chrX 100849210 100849269 -65801027 + B1_Mur3 SINE Alu 89 148 -1 9 1354 497 64 0 13 chrX 100849453 100849532 -65800764 + (TC)n Simple_repeat Simple_repeat 1 78 0 9 1354 216 0 0 0 chrX 100849532 100849556 -65800740 + (TG)n Simple_repeat Simple_repeat 1 24 0 9 1354 338 276 40 84 chrX 100849566 100849773 -65800523 - RSINE1 SINE B4 -18 274 82 9 1354 1088 66 0 7 chrX 100849830 100849967 -65800329 - B1_Mus1 SINE Alu -12 136 1 9 1354 191 188 0 20 chrX 100850052 100850101 -65800195 + CT-rich Low_complexity Low_complexity 1 48 0 9 1354 419 321 21 0 chrX 100850103 100850243 -65800053 - ID_B1 SINE B4 -2 222 80 9 1354 268 316 31 10 chrX 100850373 100850469 -65799827 + PB1D10 SINE Alu 5 102 -15 9 1354 333 0 0 0 chrX 100850714 100850751 -65799545 + (TG)n Simple_repeat Simple_repeat 1 37 0 9 1354 505 246 52 9 chrX 100851016 100851131 -65799165 - B3 SINE B2 -96 120 1 9 1354 637 157 56 32 chrX 100851312 100851437 -65798859 - B3 SINE B2 0 216 89 9 1354 365 103 73 0 chrX 100851437 100851505 -65798791 + Lx4A LINE L1 6984 7056 -2 9 1354 397 202 3 1 chrX 100851595 100851677 -65798619 - B3 SINE B2 -110 83 1 9 1354 249 57 0 0 chrX 100851740 100851775 -65798521 + (GA)n Simple_repeat Simple_repeat 2 36 0 9 1354 286 253 38 0 chrX 100851801 100851880 -65798416 + ID4 SINE ID 1 82 -1 9 1354 212 217 0 42 chrX 100851908 100851980 -65798316 + G-rich Low_complexity Low_complexity 4 72 0 9 1354 570 221 14 29 chrX 100852711 100852851 -65797445 - B1_Mur3 SINE Alu -6 143 6 9 1354 219 139 0 0 chrX 100853754 100853790 -65796506 + (T)n Simple_repeat Simple_repeat 1 36 0 9 1354 447 288 12 58 chrX 100855762 100855782 -65794514 + ID SINE ID 60 80 -144 1 1354 291 28 0 0 chrX 100855782 100855818 -65794478 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1354 596 227 20 41 chrX 100855823 100855970 -65794326 + B1F SINE Alu 6 149 0 1 1354 268 366 0 0 chrX 100855985 100856056 -65794240 + ID4_ SINE ID 10 80 -3 1 1354 2012 159 30 63 chrX 100856074 100856439 -65793857 - ORR1C2 LTR MaLR 0 384 27 1 1354 1307 118 0 5 chrX 100856439 100856627 -65793669 - B2_Mm2 SINE B2 -7 188 2 1 1354 2012 159 30 63 chrX 100856627 100856658 -65793638 - ORR1C2 LTR MaLR -358 26 1 1 1354 1957 141 14 11 chrX 100856658 100857032 -65793264 - ORR1C2-int LTR MaLR -191 1772 1148 1 1354 369 123 0 0 chrX 100857085 100857150 -65793146 + (T)n Simple_repeat Simple_repeat 1 65 0 1 1354 976 59 88 7 chrX 100857150 100857287 -65793009 - B1_Mus1 SINE Alu 0 148 1 1 1354 2243 138 62 0 chrX 100857554 100857925 -65792371 + ORR1B1 LTR MaLR 1 394 0 1 1354 3393 226 63 48 chrX 100858097 100859099 -65791197 - ORR1C2-int LTR MaLR -353 1017 1 1 1354 895 133 0 45 chrX 100859099 100859256 -65791040 - ORR1C2 LTR MaLR 0 384 235 1 1354 510 256 30 8 chrX 100859317 100859451 -65790845 + ID_B1 SINE B4 84 220 -4 1 1354 1118 106 0 11 chrX 100859451 100859633 -65790663 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 1354 2175 116 28 59 chrX 100859668 100860091 -65790205 - RLTR45 LTR ERVK 0 482 73 1 1354 462 18 0 0 chrX 100860472 100860527 -65789769 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1354 299 254 0 0 chrX 100860562 100860629 -65789667 + PB1D10 SINE Alu 23 89 -28 1 1354 551 28 28 0 chrX 100860693 100860765 -65789531 + (TTTTC)n Simple_repeat Simple_repeat 2 75 0 1 1354 409 107 107 0 chrX 100860774 100860858 -65789438 - Lx2 LINE L1 -2 6995 6903 1 1354 1254 95 0 0 chrX 100860897 100861076 -65789220 + (TC)n Simple_repeat Simple_repeat 2 180 0 1 1354 922 150 0 13 chrX 100861076 100861214 -65789082 - B1_Mus1 SINE Alu -10 138 1 1 1354 203 0 37 0 chrX 100861226 100861253 -65789043 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1354 206 241 35 0 chrX 100861291 100861307 -65788989 + (CAAA)n Simple_repeat Simple_repeat 2 19 0 1 1354 889 164 14 14 chrX 100861307 100861455 -65788841 + B1_Mur2 SINE Alu 1 148 -1 1 1354 206 241 35 0 chrX 100861455 100861525 -65788771 + (CAAA)n Simple_repeat Simple_repeat 4 74 0 1 1354 471 141 0 0 chrX 100861530 100861608 -65788688 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 1354 186 43 0 0 chrX 100862149 100862172 -65788124 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 1354 280 197 0 83 chrX 100862173 100862266 -65788030 - B1_Mm SINE Alu -5 145 69 1 1354 862 152 14 0 chrX 100862279 100862417 -65787879 + B1_Mur2 SINE Alu 1 140 -9 1 1354 706 200 0 0 chrX 100862532 100862662 -65787634 - B1_Mus1 SINE Alu 0 148 19 1 1354 585 42 0 0 chrX 100862876 100862948 -65787348 + (TC)n Simple_repeat Simple_repeat 1 72 0 1 1354 298 354 33 54 chrX 100863061 100863090 -65787206 - Lx8 LINE L1 -248 7225 7202 1 1354 1341 186 134 102 chrX 100863090 100863259 -65787037 + ORR1C2 LTR MaLR 1 171 -213 1 1354 765 56 0 0 chrX 100863259 100863366 -65786930 + (TC)n Simple_repeat Simple_repeat 2 108 0 1 1354 1341 186 134 102 chrX 100863366 100863497 -65786799 + ORR1C2 LTR MaLR 172 328 -56 1 1354 1363 85 26 5 chrX 100863497 100863686 -65786610 - B2_Mm2 SINE B2 -1 194 2 1 1354 1341 186 134 102 chrX 100863686 100863756 -65786540 + ORR1C2 LTR MaLR 329 383 -1 1 1354 298 354 33 54 chrX 100863756 100863968 -65786328 - Lx8 LINE L1 -272 7201 6989 1 1354 8129 56 2 1 chrX 100864066 100865393 -65784903 - L1Md_F2 LINE L1 -11 6571 5244 1 1354 490 242 30 18 chrX 100865381 100865549 -65784747 - L1_Rod LINE L1 -6539 633 464 1 1354 813 254 16 5 chrX 100866244 100866430 -65783866 - B3 SINE B2 -2 214 27 1 1354 180 111 0 0 chrX 100866430 100866457 -65783839 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1354 1400 90 5 21 chrX 100866471 100866663 -65783633 - B2_Mm1t SINE B2 -3 190 2 1 1354 2239 102 3 58 chrX 100866733 100867078 -65783218 + ORR1A2 LTR MaLR 1 326 -1 1 1354 1219 41 0 14 chrX 100867346 100867494 -65782802 + B1_Mus2 SINE Alu 2 147 0 1 1354 22 0 0 0 chrX 100867494 100867516 -65782780 + AT_rich Low_complexity Low_complexity 1 22 0 1 1354 468 204 36 18 chrX 100867522 100867687 -65782609 + Lx9 LINE L1 7457 7624 -20 1 1354 348 24 0 0 chrX 100867689 100867730 -65782566 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1 1354 843 142 21 0 chrX 100867753 100867894 -65782402 + B1_Mur2 SINE Alu 6 149 0 1 1354 660 100 29 20 chrX 100867897 100867957 -65782339 + LSU-rRNA_Hsa rRNA rRNA 4013 4070 -965 1 1354 434 18 18 0 chrX 100867957 100868012 -65782284 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1354 660 100 29 20 chrX 100868012 100868053 -65782243 + LSU-rRNA_Hsa rRNA rRNA 4071 4114 -921 1 1354 243 0 0 0 chrX 100868060 100868087 -65782209 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1354 257 323 0 0 chrX 100868205 100868270 -65782026 - ID4_ SINE ID -4 79 15 1 1354 442 208 41 10 chrX 100868309 100868406 -65781890 + B4A SINE B4 2 101 -191 1 1354 293 111 0 0 chrX 100868400 100868445 -65781851 + B1_Mur4 SINE Alu 106 150 0 1 1354 448 304 0 8 chrX 100868454 100868580 -65781716 + B4A SINE B4 82 206 -86 1 1354 228 67 0 0 chrX 100868634 100868664 -65781632 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 1 1354 260 287 19 38 chrX 100868755 100868860 -65781436 + L1M2 LINE L1 41 143 -6887 1 1354 726 72 0 0 chrX 100869494 100869591 -65780705 + (TTTTG)n Simple_repeat Simple_repeat 4 100 0 1 1354 707 147 7 99 chrX 100869591 100869742 -65780554 - B1_Mur3 SINE Alu -12 137 1 1 1354 477 0 0 0 chrX 100869756 100869809 -65780487 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 1 1354 462 301 50 38 chrX 100869832 100869991 -65780305 - B3 SINE B2 -8 208 48 1 1354 252 338 0 0 chrX 100870056 100870127 -65780169 + L1M2 LINE L1 199 269 -6761 1 1354 359 269 164 0 chrX 100870566 100870737 -65779559 + L1M2 LINE L1 3452 3650 -2493 1 1354 1241 54 0 0 chrX 100870737 100870885 -65779411 + B1_Mus1 SINE Alu 1 148 0 1 1354 367 240 62 10 chrX 100870970 100871067 -65779229 + RSINE1 SINE B4 31 132 -33 1 1354 726 44 0 0 chrX 100871071 100871161 -65779135 + (TCCC)n Simple_repeat Simple_repeat 3 92 0 1 1354 202 139 28 0 chrX 100871171 100871207 -65779089 + (TCTG)n Simple_repeat Simple_repeat 3 39 0 1 1354 309 272 158 51 chrX 100871233 100871743 -65778553 + L1M2 LINE L1 2062 2714 -4126 1 1354 387 0 0 0 chrX 100872085 100872128 -65778168 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 1 1354 1210 68 0 0 chrX 100872130 100872277 -65778019 - B1_Mus1 SINE Alu -1 147 1 1 1354 243 214 36 0 chrX 100872573 100872629 -65777667 - B1_Mus2 SINE Alu -87 60 3 1 1354 1170 105 0 0 chrX 100872636 100872808 -65777488 + (TTTC)n Simple_repeat Simple_repeat 2 173 0 1 1354 1001 87 65 0 chrX 100872838 100872976 -65777320 - B1_Mm SINE Alu 0 147 1 1 1354 291 114 0 0 chrX 100872995 100873039 -65777257 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 1 1354 1362 35 23 28 chrX 100873039 100873216 -65777080 - B2_Mm2 SINE B2 -18 177 2 1 1354 1069 122 0 0 chrX 100873279 100873426 -65776870 - B1_Mus1 SINE Alu 0 148 2 1 1354 733 128 19 124 chrX 100873607 100873760 -65776536 + B1_Mur4 SINE Alu 1 138 -12 1 1354 216 0 0 0 chrX 100873760 100873784 -65776512 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 1 1354 201 158 53 0 chrX 100873797 100873835 -65776461 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 1 1354 792 209 13 7 chrX 100873839 100873993 -65776303 + B3 SINE B2 57 211 -5 1 1354 702 268 126 35 chrX 100873994 100874034 -65776262 + L1_Rod LINE L1 2200 2241 -3606 1 1354 1572 68 0 0 chrX 100874034 100874226 -65776070 + B2_Mm1t SINE B2 1 192 -1 1 1354 702 268 126 35 chrX 100874226 100874502 -65775794 + L1_Rod LINE L1 2242 2545 -3302 1 1354 689 98 0 0 chrX 100874537 100874639 -65775657 - B1_Mur3 SINE Alu -14 135 34 1 1354 1139 244 136 18 chrX 100874697 100875027 -65775269 - Lx2B LINE L1 -10 6990 6622 1 1354 872 298 55 94 chrX 100875014 100875096 -65775200 + L1M2 LINE L1 3477 3560 -3280 1 1354 1312 91 16 21 chrX 100875096 100875287 -65775009 + B2_Mm2 SINE B2 1 190 -5 1 1354 872 298 55 94 chrX 100875287 100875406 -65774890 + L1M2 LINE L1 3561 3655 -3185 1 1354 577 176 136 48 chrX 100875406 100875531 -65774765 + B1_Mur1 SINE Alu 4 139 -10 1 1354 872 298 55 94 chrX 100875531 100875817 -65774479 + L1M2 LINE L1 3656 3946 -2894 1 1354 1513 153 32 36 chrX 100876311 100876589 -65773707 - Lx5 LINE L1 -105 6945 6669 1 1354 3215 181 259 23 chrX 100876610 100876718 -65773578 - RMER1A Other Other -10 1020 885 1 1354 327 25 0 0 chrX 100876718 100876758 -65773538 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1354 3215 213 206 38 chrX 100876758 100877999 -65772297 - RMER1A Other Other -146 884 1 1 1354 610 265 7 0 chrX 100878213 100878360 -65771936 - B1F SINE Alu -1 148 1 1 1354 406 286 88 31 chrX 100878360 100878519 -65771777 + MTEa-int LTR MaLR 1411 1578 -2 1 1354 426 252 29 109 chrX 100878523 100878661 -65771635 + MTEa LTR MaLR 6 132 -247 1 1354 541 259 22 22 chrX 100878672 100878810 -65771486 - ERVL-B4-int LTR ERVL -2265 3449 3312 1 1354 434 319 26 0 chrX 100878835 100878948 -65771348 + B1F SINE Alu 2 117 -32 1 1354 330 26 0 0 chrX 100878962 100879001 -65771295 + (CCAA)n Simple_repeat Simple_repeat 4 42 0 1 1354 441 0 0 0 chrX 100879022 100879071 -65771225 + (CAA)n Simple_repeat Simple_repeat 2 50 0 1 1354 513 232 28 21 chrX 100879098 100879239 -65771057 + B1F2 SINE Alu 1 142 -7 1 1354 388 286 19 0 chrX 100879297 100879402 -65770894 - ERVL-B4-int LTR ERVL -2417 3297 3191 1 1354 347 327 82 70 chrX 100879438 100879681 -65770615 - ORR1E LTR MaLR -50 309 64 1 1354 714 237 5 64 chrX 100879725 100879928 -65770368 - MTE-int LTR MaLR -55 1525 1335 1 1354 857 169 0 39 chrX 100880711 100880865 -65769431 - B1_Mur2 SINE Alu -1 148 1 1 1354 910 324 67 22 chrX 100880915 100881316 -65768980 - MTE-int LTR MaLR -281 1299 881 1 1354 427 138 125 21 chrX 100881372 100881468 -65768828 + PB1D9 SINE Alu 6 111 -9 1 1354 944 192 78 0 chrX 100881559 100881752 -65768544 + B3 SINE B2 5 212 -4 1 1354 210 304 0 0 chrX 100882592 100882648 -65767648 - PB1D10 SINE Alu -13 104 49 1 1354 1133 78 139 0 chrX 100882668 100882834 -65767462 + B2_Mm1t SINE B2 2 190 -3 1 1354 1291 117 16 0 chrX 100882867 100883055 -65767241 - B2_Mm2 SINE B2 0 195 5 1 1354 504 144 155 0 chrX 100883139 100883236 -65767060 + B1_Mur4 SINE Alu 26 137 -13 1 1354 254 372 35 26 chrX 100883568 100883684 -65766612 + PB1D10 SINE Alu 1 117 0 1 1354 1212 102 62 6 chrX 100883691 100883868 -65766428 + B2_Mm2 SINE B2 1 187 -8 1 1354 585 277 15 0 chrX 100885107 100885244 -65765052 + B1F SINE Alu 10 148 -1 1 1354 336 127 0 0 chrX 100885244 100885299 -65764997 + (CCAA)n Simple_repeat Simple_repeat 4 58 0 1 1354 656 107 10 0 chrX 100886035 100886138 -65764158 + (TC)n Simple_repeat Simple_repeat 1 104 0 1 1354 1038 120 0 0 chrX 100886138 100886280 -65764016 - B1_Mus1 SINE Alu -6 142 1 1 1354 765 203 7 7 chrX 100886684 100886828 -65763468 + B1_Mus2 SINE Alu 4 147 0 1 1354 1335 105 0 25 chrX 100886832 100887028 -65763268 + B2_Mm2 SINE B2 2 192 -3 1 1354 1876 147 65 14 chrX 100887077 100887429 -65762867 - ORR1C2 LTR MaLR -5 379 10 1 1354 1331 152 28 19 chrX 100887629 100887888 -65762408 + ORR1C1 LTR MaLR 2 238 -140 1 1354 234 167 0 0 chrX 100887875 100887917 -65762379 + MT2A LTR ERVL 492 533 0 1 1354 296 257 144 22 chrX 100889193 100889332 -65760964 + MIRc SINE MIR 104 259 -9 1 1354 215 200 0 0 chrX 100891322 100891362 -65758934 + C-rich Low_complexity Low_complexity 1 40 0 1 1354 313 95 15 31 chrX 100895604 100895669 -65754627 + B2_Mm1a SINE B2 126 189 -4 1 1354 252 288 0 0 chrX 100895670 100895729 -65754567 - B4A SINE B4 -232 60 2 1 1354 348 304 33 0 chrX 100896482 100896574 -65753722 + B1F SINE Alu 32 126 -23 1 1354 336 102 0 0 chrX 100898726 100898775 -65751521 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1354 834 251 28 173 chrX 100898792 100898999 -65751297 - B4 SINE B4 -20 272 87 1 1354 487 260 120 27 chrX 100898999 100899149 -65751147 - RSINE1 SINE B4 0 165 2 1 1354 834 251 28 173 chrX 100899149 100899259 -65751037 - B4 SINE B4 -206 86 1 1 1354 213 241 33 49 chrX 100899388 100899449 -65750847 + MIR SINE MIR 35 94 -114 1 1354 185 171 86 0 chrX 100899799 100899834 -65750462 + MIRc SINE MIR 90 127 -141 1 1354 1580 190 151 19 chrX 100899869 100900239 -65750057 + MTD LTR MaLR 1 419 0 1 1354 216 0 0 0 chrX 100900759 100900783 -65749513 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1354 369 265 50 120 chrX 100901000 100901020 -65749276 - ID_B1 SINE B4 -53 239 191 1 1354 614 189 0 0 chrX 100901020 100901126 -65749170 - B1_Mur2 SINE Alu -1 148 43 1 1354 369 265 50 120 chrX 100901126 100901174 -65749122 - ID_B1 SINE B4 -53 190 64 1 1354 365 217 14 0 chrX 100902147 100902216 -65748080 + ID2 SINE ID 3 72 -11 1 1354 302 305 0 0 chrX 100902501 100902583 -65747713 - ID4_ SINE ID -1 82 1 1 1354 340 296 63 49 chrX 100902591 100902733 -65747563 - B1F SINE Alu -5 144 1 1 1354 397 250 101 9 chrX 100902891 100903000 -65747296 - PB1D7 SINE Alu -1 119 1 1 1354 531 152 295 0 chrX 100903802 100903914 -65746382 - B1_Mur2 SINE Alu 0 149 5 1 1354 997 123 14 0 chrX 100903937 100904083 -65746213 - B1_Mus1 SINE Alu 0 148 1 1 1354 533 130 0 0 chrX 100904278 100904355 -65745941 + B2_Mm2 SINE B2 1 77 -118 1 1354 334 51 24 71 chrX 100904368 100904453 -65745843 + (CAAAAA)n Simple_repeat Simple_repeat 3 83 0 1 1354 460 170 155 31 chrX 100904475 100904572 -65745724 + PB1D10 SINE Alu 9 117 0 1 1354 268 246 0 0 chrX 100905988 100906045 -65744251 + MER121 Unknown Unknown 133 189 -223 1 1354 203 333 97 42 chrX 100907090 100907234 -65743062 - MIR3 SINE MIR -24 184 33 1 1354 491 284 137 52 chrX 100908215 100908427 -65741869 - L3b LINE CR1 -247 235 6 1 1354 235 346 12 0 chrX 100908797 100908878 -65741418 - ID4_ SINE ID 0 83 2 1 1354 375 270 71 108 chrX 100908968 100909180 -65741116 + L1ME3 LINE L1 4982 5185 -961 1 1354 356 318 92 67 chrX 100909630 100909913 -65740383 + B4 SINE B4 3 292 0 1 1354 282 273 36 36 chrX 100909961 100910098 -65740198 + L1MD LINE L1 5185 5321 -825 1 1354 1107 79 0 0 chrX 100910106 100910246 -65740050 + B1_Mus1 SINE Alu 1 140 -8 1 1354 537 30 0 0 chrX 100910246 100910313 -65739983 + (CAAAC)n Simple_repeat Simple_repeat 2 68 0 1 1354 342 208 36 54 chrX 100910319 100910450 -65739846 + L1ME3 LINE L1 5303 5441 -721 1 1354 430 292 8 8 chrX 100910450 100910570 -65739726 + PB1D10 SINE Alu 1 120 0 1 1354 576 284 49 18 chrX 100910583 100910809 -65739487 + L1ME3 LINE L1 5416 5648 -531 1 1354 293 353 32 5 chrX 100910953 100911138 -65739158 + L1ME3 LINE L1 5694 5883 -279 1 1354 2693 137 48 33 chrX 100911357 100911816 -65738480 + RMER4A LTR ERVK 1 466 0 1 1354 478 289 43 19 chrX 100912002 100912164 -65738132 + RMER15 LTR ERVL 403 568 -7 1 1354 1167 52 0 0 chrX 100912220 100912356 -65737940 + B1_Mus2 SINE Alu 1 136 -11 1 1354 224 30 0 29 chrX 100912356 100912390 -65737906 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1 1354 245 186 49 33 chrX 100912469 100912530 -65737766 + B4 SINE B4 7 68 -224 1 1354 264 270 31 16 chrX 100912477 100912541 -65737755 + ID4 SINE ID 16 80 -3 1 1354 434 33 0 16 chrX 100912591 100912652 -65737644 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 1354 1213 55 0 0 chrX 100912953 100913099 -65737197 - B1_Mus2 SINE Alu 0 147 2 1 1354 690 248 7 0 chrX 100913364 100913505 -65736791 + ID_B1 SINE B4 77 218 -6 1 1354 406 225 38 167 chrX 100913563 100913803 -65736493 + L1MA4 LINE L1 5156 5364 -779 1 1354 460 305 0 14 chrX 100913821 100913962 -65736334 + ID_B1 SINE B4 84 218 -6 1 1354 1045 295 104 11 chrX 100913982 100914455 -65735841 + L1MA4 LINE L1 5387 5903 -397 1 1354 345 316 45 28 chrX 100914885 100915061 -65735235 - RMER4A LTR ERVK -280 186 8 1 1354 2441 114 143 0 chrX 100916901 100917340 -65732956 - RMER6C LTR ERVK -7 683 182 1 1354 587 155 0 0 chrX 100917519 100917603 -65732693 - RMER1C Other Other -147 1195 1112 1 1354 2190 36 0 0 chrX 100917599 100917851 -65732445 - L1Md_F3 LINE L1 -200 6384 6133 1 1354 946 326 111 55 chrX 100917948 100918425 -65731871 - L1MDa LINE L1 -5927 706 203 1 1354 1581 33 0 0 chrX 100918515 100918696 -65731600 - B2_Mm1a SINE B2 -11 182 2 1 1354 339 295 0 13 chrX 100918841 100918920 -65731376 - ID4_ SINE ID 0 83 6 1 1354 1065 53 8 0 chrX 100918935 100919067 -65731229 - B1_Mus1 SINE Alu -1 147 15 1 1354 616 204 27 34 chrX 100919067 100919082 -65731214 - ID_B1 SINE B4 -2 222 77 1 1354 1184 91 69 0 chrX 100919102 100919277 -65731019 + B2_Mm2 SINE B2 2 188 -7 1 1354 37 0 0 0 chrX 100919504 100919541 -65730755 + AT_rich Low_complexity Low_complexity 1 37 0 1 1354 601 271 0 0 chrX 100919616 100919745 -65730551 - ID_B1 SINE B4 -3 221 93 1 1354 219 260 0 0 chrX 100919923 100919973 -65730323 + (ATG)n Simple_repeat Simple_repeat 3 52 0 1 1354 222 194 14 27 chrX 100921609 100921683 -65728613 + CT-rich Low_complexity Low_complexity 2 74 0 1 1354 803 207 0 0 chrX 100921689 100921829 -65728467 - B1_Mur4 SINE Alu -8 142 3 1 1354 403 225 12 0 chrX 100921858 100921938 -65728358 - ID4_ SINE ID -2 81 1 1 1354 3930 80 16 71 chrX 100922340 100922422 -65727874 + Lx3_Mus LINE L1 6434 6500 -509 1 1354 1135 72 0 0 chrX 100922422 100922561 -65727735 - B1_Mus1 SINE Alu -7 141 3 1 1354 3930 80 16 71 chrX 100922561 100923087 -65727209 + Lx3_Mus LINE L1 6501 7009 0 1 1354 37 0 0 0 chrX 100923145 100923182 -65727114 + AT_rich Low_complexity Low_complexity 1 37 0 1 1354 496 101 20 10 chrX 100923237 100923337 -65726959 + Lx3_Mus LINE L1 6897 6997 -12 1 1354 21 36 0 0 chrX 100923337 100923365 -65726931 + AT_rich Low_complexity Low_complexity 1 28 0 1 1354 513 0 0 0 chrX 100923860 100923917 -65726379 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1354 884 144 8 0 chrX 100923918 100924050 -65726246 - B1_Mus1 SINE Alu -12 136 4 1 1354 242 253 135 94 chrX 100924189 100924285 -65726011 + ID_B1 SINE B4 77 176 -48 1 1354 356 204 191 11 chrX 100924208 100924297 -65725999 + PB1D7 SINE Alu 6 110 -10 1 1354 787 262 48 14 chrX 100924347 100924637 -65725659 + L1ME1 LINE L1 3750 4049 -2097 1 1354 722 316 0 112 chrX 100924749 100924991 -65725305 + B3 SINE B2 2 216 0 1 169 519 276 124 80 chrX 100924991 100925626 -65724670 + L1ME1 LINE L1 5277 5913 -266 1 1355 798 169 59 0 chrX 100925626 100925762 -65724534 - B1_Mur4 SINE Alu -6 144 1 1 1355 424 275 152 116 chrX 100925762 100925991 -65724305 + L1ME1 LINE L1 5914 6177 -2 1 1355 288 300 0 9 chrX 100926253 100926364 -65723932 + GA-rich Low_complexity Low_complexity 1 110 0 1 1355 253 255 112 69 chrX 100926365 100926525 -65723771 + L1ME1 LINE L1 5824 5990 -189 1 1355 563 205 49 18 chrX 100926875 100927039 -65723257 + L1MA10 LINE L1 6166 6334 0 1 1355 368 291 43 43 chrX 100927047 100927187 -65723109 - MIRc SINE MIR -126 142 3 1 1355 205 279 0 0 chrX 100927187 100927224 -65723072 + L2 LINE L2 40 76 -3343 1 1355 183 217 22 0 chrX 100927585 100927631 -65722665 - MIR3 SINE MIR -51 157 111 1 1355 748 276 82 53 chrX 100928001 100928319 -65721977 + ORR1E LTR MaLR 1 327 -32 1 1355 460 281 141 38 chrX 100928920 100929105 -65721191 - ID_B1 SINE B4 -4 220 17 1 1355 246 338 14 0 chrX 100929369 100929443 -65720853 - ID4_ SINE ID -4 79 5 1 1355 279 307 0 0 chrX 100929464 100929552 -65720744 + MIR SINE MIR 70 157 -105 1 1355 411 282 25 17 chrX 100930513 100930632 -65719664 - B1F SINE Alu -7 142 23 1 1355 266 299 14 2 chrX 100931031 100931113 -65719183 - MIRb SINE MIR -174 94 6 1 1355 656 35 0 11 chrX 100931374 100931462 -65718834 + (TTTA)n Simple_repeat Simple_repeat 1 87 0 1 1355 309 305 113 21 chrX 100932302 100932399 -65717897 - PB1D10 SINE Alu 0 117 12 1 1355 748 201 29 7 chrX 100932436 100932576 -65717720 - B1_Mur2 SINE Alu 0 149 7 1 1355 1075 214 5 9 chrX 100932620 100932832 -65717464 - B3 SINE B2 -5 211 1 1 1355 468 0 0 0 chrX 100934053 100934105 -65716191 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1355 224 59 29 0 chrX 100936029 100936063 -65714233 + (TGG)n Simple_repeat Simple_repeat 2 36 0 1 1355 335 208 23 0 chrX 100936160 100936293 -65714003 + GA-rich Low_complexity Low_complexity 1 136 0 1 1355 453 36 0 0 chrX 100936865 100936920 -65713376 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1355 375 23 0 0 chrX 100936929 100936973 -65713323 + (TC)n Simple_repeat Simple_repeat 1 44 0 1 1355 432 204 30 10 chrX 100937004 100937103 -65713193 - ID_B1 SINE B4 -8 216 116 1 1355 259 360 57 7 chrX 100937395 100937535 -65712761 - MIR3 SINE MIR -10 198 52 1 1355 633 234 21 28 chrX 100938407 100938552 -65711744 - B1_Mur3 SINE Alu -5 144 1 1 1355 273 227 20 129 chrX 100938468 100938569 -65711727 - MT2B LTR ERVL -362 239 150 1 1355 761 251 107 10 chrX 100940582 100940779 -65709517 + B3 SINE B2 1 216 0 1 1355 739 272 123 0 chrX 100941377 100941572 -65708724 + ID_B1 SINE B4 5 223 -1 1 1355 1712 160 149 20 chrX 100941676 100942026 -65708270 + MTD LTR MaLR 25 419 0 1 1355 1322 316 113 58 chrX 100942141 100942506 -65707790 + L1M4b LINE L1 338 725 -6609 1 1355 271 329 0 0 chrX 100942506 100942579 -65707717 + ID4 SINE ID 2 74 -9 1 1355 279 0 0 0 chrX 100942589 100942620 -65707676 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1355 1322 316 113 58 chrX 100942620 100943531 -65706765 + L1M4b LINE L1 731 1695 -5639 1 1355 219 69 0 0 chrX 100943777 100943806 -65706490 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1 1355 318 243 0 0 chrX 100943915 100943985 -65706311 + L1MB7 LINE L1 5922 5991 -193 1 1355 396 281 0 147 chrX 100944102 100944252 -65706044 + B1F SINE Alu 5 132 -17 1 1355 1610 247 192 26 chrX 100944270 100945105 -65705191 + L1M4b LINE L1 3904 4876 -2130 1 1355 343 136 2 38 chrX 100945114 100945196 -65705100 + B1_Mur4 SINE Alu 1 81 -68 1 1355 384 0 0 162 chrX 100945197 100945401 -65704895 + (CAGAG)n Simple_repeat Simple_repeat 5 175 0 1 1355 577 160 0 36 chrX 100945404 100945514 -65704782 + B1_Mur3 SINE Alu 42 147 -2 1 1355 216 179 0 0 chrX 100945514 100945553 -65704743 + A-rich Low_complexity Low_complexity 1 39 0 1 1355 372 330 56 84 chrX 100945591 100945876 -65704420 + B4 SINE B4 2 278 -14 1 1355 429 20 0 0 chrX 100945898 100945948 -65704348 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1355 414 0 0 0 chrX 100945948 100945993 -65704303 + (TAA)n Simple_repeat Simple_repeat 2 47 0 1 1355 1499 235 99 120 chrX 100946001 100946373 -65703923 + L1M4b LINE L1 4885 5280 -1726 1 1355 317 110 33 37 chrX 100946373 100946441 -65703855 + B1F SINE Alu 84 149 0 1 1355 1499 235 99 120 chrX 100946441 100946818 -65703478 + L1M4b LINE L1 5281 5684 -1322 1 1355 607 255 24 12 chrX 100946822 100946989 -65703307 + L1MB3 LINE L1 5966 6134 -49 1 1355 463 314 0 63 chrX 100947477 100947603 -65702693 + RSINE1 SINE B4 38 155 -10 1 1355 754 254 7 0 chrX 100947709 100947851 -65702445 + B3A SINE B2 24 166 -32 1 1355 411 21 0 0 chrX 100947852 100947900 -65702396 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1355 215 352 22 43 chrX 100947995 100948087 -65702209 + PB1D10 SINE Alu 23 112 -5 1 1355 396 250 0 0 chrX 100948188 100948260 -65702036 + ID4_ SINE ID 1 72 -11 1 1355 180 0 0 0 chrX 100948301 100948321 -65701975 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1355 1066 256 106 63 chrX 100948329 100948792 -65701504 + L1MCa LINE L1 18 500 -6008 1 1355 288 242 164 87 chrX 100948825 100948929 -65701367 - PB1D7 SINE Alu -5 115 1 1 1355 197 83 28 0 chrX 100949208 100949244 -65701052 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 1 1355 775 268 52 33 chrX 100949251 100949463 -65700833 - B4A SINE B4 -75 217 2 1 1355 477 0 0 0 chrX 100949508 100949561 -65700735 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1355 485 269 35 46 chrX 100949561 100949740 -65700556 - Lx7 LINE L1 -1787 5909 5698 1 1355 3015 132 90 12 chrX 100949740 100950187 -65700109 - RLTR11A LTR ERVK 0 528 43 1 1355 267 31 0 0 chrX 100950187 100950219 -65700077 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1355 3015 132 90 12 chrX 100950219 100950261 -65700035 - RLTR11A LTR ERVK -486 42 1 1 1355 485 266 34 45 chrX 100950261 100950289 -65700007 - Lx7 LINE L1 -150 5697 5671 1 1355 449 181 126 11 chrX 100950385 100950480 -65699816 + PB1D9 SINE Alu 9 114 -6 1 1355 1183 266 97 35 chrX 100950592 100951157 -65699139 + L1MCa LINE L1 1163 1762 -4746 1 1355 297 280 78 29 chrX 100951176 100951279 -65699017 + PB1D10 SINE Alu 10 117 0 1 1355 278 267 53 0 chrX 100951289 100951364 -65698932 + ID2 SINE ID 2 80 -3 1 1355 1011 211 91 13 chrX 100951384 100951615 -65698681 + MTD LTR MaLR 171 419 0 1 1355 1081 281 74 27 chrX 100951639 100952053 -65698243 + L1MA5 LINE L1 5788 6232 -68 1 1355 2154 126 11 129 chrX 100952053 100952518 -65697778 + RMER17C LTR ERVK 1 410 0 1 1355 1081 280 74 28 chrX 100952518 100952587 -65697709 + L1MA5 LINE L1 6233 6296 -4 1 1355 421 308 23 0 chrX 100952607 100952737 -65697559 + L1MCa LINE L1 2533 2665 -3656 1 1355 2819 16 0 0 chrX 100953046 100953350 -65696946 + L1Md_A LINE L1 6279 6582 0 1 1355 1379 90 16 26 chrX 100953353 100953547 -65696749 - B2_Mm2 SINE B2 -2 193 2 1 1355 1058 297 74 48 chrX 100955401 100955879 -65694417 + L1_Rod LINE L1 1365 1850 -3997 1 1355 2678 57 3 0 chrX 100955879 100956194 -65694102 - L1_Mus1 LINE L1 0 6567 6252 1 1355 1058 297 74 48 chrX 100956194 100956529 -65693767 + L1_Rod LINE L1 1851 2199 -3648 1 1355 261 170 0 0 chrX 100956606 100956659 -65693637 + L1_Mur3 LINE L1 3194 3246 -2631 1 1355 1039 243 9 14 chrX 100956641 100956858 -65693438 + Lx8 LINE L1 6424 6639 -834 1 1355 483 18 0 0 chrX 100956858 100956914 -65693382 + (TTA)n Simple_repeat Simple_repeat 2 57 0 1 1355 240 286 35 23 chrX 100956919 100957005 -65693291 - RSINE1 SINE B4 -7 158 72 1 1355 233 300 58 70 chrX 100957091 100957177 -65693119 - B4A SINE B4 -153 139 55 1 1355 701 173 201 0 chrX 100957218 100957357 -65692939 + Lx8 LINE L1 6631 6797 -676 1 1355 377 303 69 30 chrX 100957522 100957825 -65692471 + L1_Mur3 LINE L1 3219 3533 -2347 1 1355 310 180 89 119 chrX 100957831 100957932 -65692364 + MT2B LTR ERVL 167 264 -337 1 1355 750 145 0 0 chrX 100957844 100957961 -65692335 + B1_Mus1 SINE Alu 26 142 -6 1 1355 549 44 0 0 chrX 100957964 100958032 -65692264 + (GGA)n Simple_repeat Simple_repeat 3 70 0 1 1355 360 222 0 14 chrX 100958045 100958118 -65692178 + L1_Mur3 LINE L1 3541 3612 -2265 1 1355 16513 21 0 0 chrX 100958901 100961456 -65688840 - L1Md_T LINE L1 0 6582 4029 1 1355 1760 278 9 43 chrX 100961472 100961553 -65688743 + L1_Mur3 LINE L1 3621 3696 -2184 1 1355 1210 54 0 26 chrX 100961553 100961704 -65688592 - B1_Mus1 SINE Alu -1 147 1 1 1355 1760 278 9 43 chrX 100961704 100962204 -65688092 + L1_Mur3 LINE L1 3697 4182 -1698 1 1355 2213 263 55 36 chrX 100962184 100962858 -65687438 - Lx9 LINE L1 -321 7323 6637 1 1355 329 217 48 0 chrX 100962858 100962941 -65687355 + Lx9 LINE L1 7384 7470 -174 1 1355 329 145 16 31 chrX 100962971 100963035 -65687261 + L1_Mur3 LINE L1 4692 4754 -1126 1 1355 216 196 22 0 chrX 100963035 100963081 -65687215 + (TCTG)n Simple_repeat Simple_repeat 1 47 0 1 1355 2633 280 102 15 chrX 100963180 100964288 -65686008 + L1M2 LINE L1 4172 5375 -768 1 1355 252 184 0 0 chrX 100964324 100964373 -65685923 - MT2A LTR ERVL 0 533 485 1 1355 195 42 0 0 chrX 100964375 100964399 -65685897 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 1355 417 331 24 30 chrX 100964502 100964670 -65685626 - MT2A LTR ERVL -109 424 258 1 1355 409 228 50 0 chrX 100964670 100964771 -65685525 + L1MC LINE L1 2713 2818 -3328 1 1355 401 292 64 21 chrX 100964777 100964917 -65685379 + B1F1 SINE Alu 3 148 -1 1 1355 2324 233 63 27 chrX 100965465 100966101 -65684195 + L1_Mur3 LINE L1 1923 2581 -3299 1 1355 449 161 11 75 chrX 100966140 100966234 -65684062 - 4.5SRNA scRNA scRNA -5 89 2 1 1355 1027 226 176 39 chrX 100966235 100966275 -65684021 + Lx6 LINE L1 7079 7118 -342 1 1355 495 48 0 0 chrX 100966275 100966337 -65683959 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 1355 1027 226 176 39 chrX 100966337 100966632 -65683664 + Lx6 LINE L1 7119 7459 -1 1 1355 2453 251 72 43 chrX 100966631 100967563 -65682733 + L1_Mur3 LINE L1 2600 3558 -2322 1 1355 583 232 239 19 chrX 100967532 100967796 -65682500 + L1M4 LINE L1 5297 5618 -556 1 1355 201 182 0 0 chrX 100968434 100968467 -65681829 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 1 1355 190 307 70 9 chrX 100968583 100968698 -65681598 + MIRm SINE MIR 72 193 -15 1 1355 317 315 17 35 chrX 100969972 100970087 -65680209 - MLT1A1 LTR MaLR -5 403 291 1 1355 715 260 401 4 chrX 100970305 100970562 -65679734 - MTE2b LTR MaLR 0 379 21 1 1355 241 270 48 0 chrX 100971002 100971065 -65679231 + PB1D10 SINE Alu 51 116 -1 1 1355 1086 76 5 28 chrX 100971073 100971295 -65679001 + (TAGA)n Simple_repeat Simple_repeat 1 216 0 1 1355 22 0 0 0 chrX 100971295 100971317 -65678979 + AT_rich Low_complexity Low_complexity 1 22 0 1 1355 488 283 30 59 chrX 100971354 100971523 -65678773 + RSINE1 SINE B4 2 165 0 1 1355 237 178 0 0 chrX 100971523 100971568 -65678728 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1355 4417 52 6 0 chrX 100972613 100973116 -65677180 + L1_Mus1 LINE L1 6062 6567 0 1 1355 22 0 0 0 chrX 100973305 100973327 -65676969 + AT_rich Low_complexity Low_complexity 1 22 0 1 1355 995 126 44 0 chrX 100974456 100974591 -65675705 - B1_Mur4 SINE Alu -9 141 1 1 1355 900 267 85 63 chrX 100974996 100975113 -65675183 + L1ME1 LINE L1 5709 5816 -363 1 1355 701 214 0 0 chrX 100975113 100975230 -65675066 + PB1D10 SINE Alu 1 117 0 1 1355 900 267 85 63 chrX 100975230 100975572 -65674724 + L1ME1 LINE L1 5817 6178 -1 1 1355 1250 74 123 0 chrX 100976062 100976224 -65674072 + B2_Mm2 SINE B2 1 182 -13 1 1355 1201 262 17 30 chrX 100976307 100976602 -65673694 + B4A SINE B4 2 292 0 1 1355 1955 216 13 29 chrX 100976720 100977096 -65673200 - ORR1D2 LTR MaLR 0 370 1 1 1355 682 171 11 0 chrX 100978540 100978716 -65671580 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 1 1355 472 178 11 40 chrX 100978944 100979120 -65671176 + CT-rich Low_complexity Low_complexity 5 175 0 1 1355 425 307 17 9 chrX 100979489 100979604 -65670692 + PB1D10 SINE Alu 2 117 0 1 1355 567 179 235 55 chrX 100980545 100980728 -65669568 + B3 SINE B2 1 216 0 1 1355 639 341 109 89 chrX 100980947 100981398 -65668898 - LTR16B2 LTR ERVL -2 460 1 1 1355 592 320 0 7 chrX 100982523 100982677 -65667619 + RSINE1 SINE B4 9 161 -4 1 1355 21 0 0 0 chrX 100982691 100982712 -65667584 + AT_rich Low_complexity Low_complexity 1 21 0 1 1355 1104 262 127 130 chrX 100982712 100983475 -65666821 + L1MA8 LINE L1 4381 5141 -999 1 1355 2192 219 107 22 chrX 100983483 100984439 -65665857 + L1MA8 LINE L1 5269 6310 -2 1 1355 480 117 0 211 chrX 100984548 100984775 -65665521 - RMER17C LTR ERVK -136 274 96 1 1355 198 0 0 0 chrX 100984780 100984802 -65665494 + (TTTTTA)n Simple_repeat Simple_repeat 4 25 0 1 1355 21 36 0 0 chrX 100984802 100984830 -65665466 + AT_rich Low_complexity Low_complexity 1 28 0 1 1355 215 232 29 39 chrX 100984917 100985020 -65665276 + A-rich Low_complexity Low_complexity 3 104 0 1 1355 24 32 0 0 chrX 100985172 100985203 -65665093 + AT_rich Low_complexity Low_complexity 1 31 0 1 1355 798 247 96 4 chrX 100985342 100985622 -65664674 - Lx9 LINE L1 -49 7595 7290 1 1355 308 296 0 36 chrX 100985702 100985786 -65664510 - ID4_ SINE ID 0 83 3 1 1355 638 264 65 6 chrX 100986472 100986640 -65663656 - MER5B DNA MER1_type 0 178 1 1 1355 722 292 70 0 chrX 100987800 100987985 -65662311 - B3 SINE B2 -17 199 2 1 1355 560 14 14 0 chrX 100987997 100988066 -65662230 + (TC)n Simple_repeat Simple_repeat 2 71 0 1 1355 205 138 0 0 chrX 100988067 100988096 -65662200 + (CCTA)n Simple_repeat Simple_repeat 4 32 0 1 1355 745 165 74 0 chrX 100988096 100988217 -65662079 - B1_Mur2 SINE Alu -9 140 11 1 1355 285 289 26 0 chrX 100988627 100988703 -65661593 + MIRc SINE MIR 90 167 -101 1 1355 507 212 115 33 chrX 100988718 100988827 -65661469 + B1F SINE Alu 18 139 -10 1 1355 603 40 0 0 chrX 100988827 100988901 -65661395 + (GGA)n Simple_repeat Simple_repeat 3 76 0 1 1355 507 212 115 33 chrX 100988901 100988913 -65661383 + B1F SINE Alu 140 149 0 1 1355 369 307 135 40 chrX 100989007 100989207 -65661089 - MIR SINE MIR -1 261 43 1 1355 300 91 0 0 chrX 100989257 100989301 -65660995 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1355 674 155 53 30 chrX 100989542 100989675 -65660621 + B1_Mus1 SINE Alu 13 148 0 1 1355 491 255 36 18 chrX 100989876 100989988 -65660308 - PB1D9 SINE Alu -6 114 1 1 1355 525 269 0 0 chrX 100991457 100991565 -65658731 - PB1D10 SINE Alu -7 110 3 1 1355 236 172 117 33 chrX 100992035 100992095 -65658201 - MIRm SINE MIR 0 276 212 1 1355 443 299 7 7 chrX 100992112 100992250 -65658046 + MamRep1879 DNA hAT? 13 150 -66 1 1355 232 302 73 36 chrX 100992870 100992980 -65657316 + MLT1E LTR MaLR 355 468 -185 1 1355 303 326 85 21 chrX 100992980 100993121 -65657175 - MIR3 SINE MIR -53 155 6 1 1355 197 200 68 33 chrX 100993880 100993977 -65656319 + MIRc SINE MIR 40 138 -138 1 1355 346 203 12 19 chrX 100994086 100994247 -65656049 + (TG)n Simple_repeat Simple_repeat 1 160 0 1 1355 351 315 0 11 chrX 100994338 100994428 -65655868 - PB1D10 SINE Alu -26 91 3 1 1355 771 112 0 0 chrX 100994666 100994782 -65655514 + (TC)n Simple_repeat Simple_repeat 2 117 0 1 1355 1014 153 0 0 chrX 100994788 100994925 -65655371 - B1_Mur2 SINE Alu -10 139 3 1 1355 1350 64 0 6 chrX 100996074 100996247 -65654049 + L1Md_F3 LINE L1 6413 6584 0 1 1355 3422 23 0 10 chrX 100996396 100996777 -65653519 - L1Md_F2 LINE L1 -535 6047 5667 1 1355 4838 25 0 4 chrX 100996777 100997304 -65652992 + L1Md_F2 LINE L1 6046 6570 -12 1 1355 3422 23 0 10 chrX 100997304 100997323 -65652973 - L1Md_F2 LINE L1 -916 5666 5651 1 1355 1171 262 0 33 chrX 100997572 100997872 -65652424 + B4A SINE B4 1 290 -2 1 1355 471 287 0 0 chrX 100998591 100998685 -65651611 + RSINE1 SINE B4 3 96 -69 1 1355 378 0 0 0 chrX 100998686 100998728 -65651568 + (CTAA)n Simple_repeat Simple_repeat 3 44 0 1 1355 400 285 92 0 chrX 100998946 100999076 -65651220 - B4A SINE B4 -14 278 137 1 1355 345 229 0 28 chrX 100999324 100999396 -65650900 + ID4_ SINE ID 4 73 -10 1 1355 520 302 47 47 chrX 100999454 100999669 -65650627 + MIRb SINE MIR 37 251 -17 1 1355 183 318 30 15 chrX 100999677 100999744 -65650552 + MIR SINE MIR 38 105 -103 1 1355 247 337 10 42 chrX 100999767 100999863 -65650433 + MIRb SINE MIR 168 260 -8 1 1355 289 253 151 86 chrX 101002359 101002545 -65647751 - MIRc SINE MIR -38 230 33 1 1355 433 318 137 5 chrX 101004027 101004239 -65646057 - MIR SINE MIR 0 262 23 2 1355 920 219 128 5 chrX 101004356 101004544 -65645752 - B3 SINE B2 -5 211 1 3 1355 513 0 0 0 chrX 101004726 101004783 -65645513 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 4 1355 207 0 0 0 chrX 101004790 101004813 -65645483 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1355 481 297 0 52 chrX 101004839 101004974 -65645322 - RSINE1 SINE B4 -35 130 3 6 1355 214 280 39 26 chrX 101005163 101005240 -65645056 - MIR3 SINE MIR -46 162 85 7 1355 347 193 0 11 chrX 101005257 101005346 -65644950 + CT-rich Low_complexity Low_complexity 4 91 0 8 1355 22 0 0 0 chrX 101005700 101005722 -65644574 + AT_rich Low_complexity Low_complexity 1 22 0 9 1355 474 276 8 8 chrX 101006291 101006408 -65643888 - PB1D10 SINE Alu 0 117 1 1 1355 209 381 0 12 chrX 101006775 101006860 -65643436 - MIRb SINE MIR -3 265 182 1 1355 420 231 56 32 chrX 101006977 101007102 -65643194 + L1MC4a LINE L1 5717 5844 -2038 1 1355 855 46 0 0 chrX 101007382 101007490 -65642806 + (TCTCCC)n Simple_repeat Simple_repeat 6 113 0 1 1355 280 259 0 17 chrX 101007539 101007598 -65642698 - ID4 SINE ID -14 69 12 1 1355 548 241 8 33 chrX 101007730 101007850 -65642446 + PB1D7 SINE Alu 4 120 0 1 1355 251 367 117 33 chrX 101008910 101009124 -65641172 + MIR SINE MIR 20 251 -11 1 1355 399 157 0 0 chrX 101010156 101010226 -65640070 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 1355 475 279 0 0 chrX 101010788 101010899 -65639397 + PB1D9 SINE Alu 2 112 -8 1 1355 646 205 296 18 chrX 101011526 101011695 -65638601 + B3 SINE B2 1 216 0 1 1355 21 0 0 0 chrX 101011946 101011967 -65638329 + AT_rich Low_complexity Low_complexity 1 21 0 2 1355 1315 34 0 0 chrX 101012116 101012262 -65638034 + B1_Mus2 SINE Alu 2 147 0 2 1355 246 95 0 0 chrX 101012267 101012309 -65637987 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 2 1355 199 235 19 19 chrX 101012360 101012412 -65637884 - MIRm SINE MIR -112 164 113 2 1355 198 0 0 0 chrX 101013017 101013039 -65637257 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 1355 366 23 0 0 chrX 101013955 101013998 -65636298 + (CAA)n Simple_repeat Simple_repeat 2 44 0 2 1355 528 321 0 15 chrX 101014286 101014422 -65635874 + B1F1 SINE Alu 2 135 -14 2 1355 195 146 0 0 chrX 101016951 101016992 -65633304 + (CTGGGG)n Simple_repeat Simple_repeat 6 46 0 2 1355 215 240 0 0 chrX 101017001 101017051 -65633245 + (TTCGGG)n Simple_repeat Simple_repeat 1 50 0 2 1355 302 301 11 0 chrX 101017320 101017413 -65632883 + CT-rich Low_complexity Low_complexity 2 95 0 2 1355 2229 57 32 0 chrX 101018206 101018485 -65631811 - L1Md_F2 LINE L1 -506 6076 5789 3 1355 3938 77 2 10 chrX 101018486 101018987 -65631309 + L1Md_F2 LINE L1 6084 6580 -2 3 1355 348 310 239 5 chrX 101020353 101020541 -65629755 - MIRb SINE MIR -15 253 22 3 1355 247 234 344 8 chrX 101020627 101020752 -65629544 + MIRc SINE MIR 17 183 -85 3 1355 669 308 34 103 chrX 101020799 101021179 -65629117 + ORR1E LTR MaLR 1 354 -5 3 1355 1245 265 104 57 chrX 101022179 101022858 -65627438 - Lx7 LINE L1 -1479 6217 5471 3 1355 1357 308 46 15 chrX 101022904 101023362 -65626934 + Lx8 LINE L1 6749 7220 -253 3 1355 559 276 24 0 chrX 101023391 101023518 -65626778 - B1F SINE Alu -19 130 1 3 1355 265 262 42 93 chrX 101023412 101023530 -65626766 - MT2B LTR ERVL -338 263 152 3 1355 183 161 0 0 chrX 101024585 101024616 -65625680 - MIRc SINE MIR -151 117 87 3 1355 758 232 223 41 chrX 101024697 101025159 -65625137 - Lx7 LINE L1 -2146 3701 3156 3 1355 771 251 34 10 chrX 101025423 101025632 -65624664 + LTRIS4 LTR ERV1 294 507 0 3 1355 1072 199 77 42 chrX 101025632 101025968 -65624328 - Lx7 LINE L1 -2698 3149 2802 3 1355 343 188 11 86 chrX 101025975 101025998 -65624298 + RMER10B LTR ERVL 313 335 -63 4 1355 915 72 33 0 chrX 101025998 101026150 -65624146 + (TCTA)n Simple_repeat Simple_repeat 4 160 0 4 1355 343 188 11 86 chrX 101026150 101026171 -65624125 + RMER10B LTR ERVL 336 349 -49 4 1355 420 117 0 0 chrX 101026171 101026248 -65624048 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 4 1355 343 188 11 86 chrX 101026248 101026295 -65624001 + RMER10B LTR ERVL 350 397 -1 4 1355 1599 195 8 36 chrX 101026297 101026653 -65623643 - Lx7 LINE L1 -3328 2519 2174 3 1355 553 269 27 7 chrX 101026655 101026801 -65623495 - Lx7 LINE L1 -889 6807 6659 4 1355 1745 303 83 69 chrX 101026797 101027788 -65622508 + Lx8 LINE L1 5649 6653 -820 4 1355 312 133 0 0 chrX 101027884 101027944 -65622352 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 4 1355 3784 289 37 5 chrX 101027988 101028957 -65621339 + MTEb-int LTR MaLR 581 1580 0 4 1355 1092 251 123 16 chrX 101028957 101029273 -65621023 + MTEb LTR MaLR 1 350 -29 4 1355 260 238 100 0 chrX 101029499 101029579 -65620717 + L2a LINE L2 3333 3420 -6 4 1355 410 364 54 17 chrX 101030138 101030378 -65619918 - MIRc SINE MIR -6 262 14 4 1355 275 250 0 0 chrX 101030999 101031055 -65619241 + CT-rich Low_complexity Low_complexity 1 56 0 4 1355 379 320 23 53 chrX 101031083 101031215 -65619081 - ID_B1 SINE B4 -88 136 9 5 1355 414 256 24 54 chrX 101031785 101031935 -65618361 + MIR SINE MIR 19 164 -98 5 1355 33 0 0 0 chrX 101032315 101032348 -65617948 + AT_rich Low_complexity Low_complexity 1 33 0 5 1355 3412 273 80 46 chrX 101032369 101033563 -65616733 - Lx9 LINE L1 -18 7626 6392 5 1355 6209 241 87 35 chrX 101033581 101035745 -65614551 - Lx9 LINE L1 -1679 5965 3656 5 1355 1014 246 83 9 chrX 101035761 101035991 -65614305 + ORR1C2 LTR MaLR 138 384 0 5 1355 2039 241 81 17 chrX 101035993 101036588 -65613708 - Lx9 LINE L1 -3046 2801 2169 5 1355 1141 222 9 5 chrX 101036602 101036815 -65613481 - B3 SINE B2 -2 214 1 5 1355 363 306 71 24 chrX 101036819 101036946 -65613350 - B3 SINE B2 -2 214 82 5 1355 8485 124 62 7 chrX 101037166 101038577 -65611719 - L1_Mur2 LINE L1 -1400 4477 2990 5 1355 309 26 0 0 chrX 101038633 101038671 -65611625 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1355 792 264 22 16 chrX 101038692 101038877 -65611419 - ORR1D1 LTR MaLR -188 186 1 5 1355 986 265 51 6 chrX 101038880 101039195 -65611101 + L1_Rod LINE L1 1270 1598 -4249 6 1355 2396 132 70 3 chrX 101039199 101039586 -65610710 + MTC LTR MaLR 1 413 -8 6 1355 1903 254 44 16 chrX 101039611 101040175 -65610121 + L1_Rod LINE L1 1606 2185 -3662 6 1355 252 156 0 82 chrX 101040175 101040224 -65610072 + B2_Mm2 SINE B2 1 45 -150 6 1355 375 298 9 71 chrX 101040461 101040573 -65609723 + PB1D10 SINE Alu 2 106 -11 6 1355 614 231 7 0 chrX 101040979 101041122 -65609174 - Lx6 LINE L1 -9 7451 7308 6 1355 2606 242 41 66 chrX 101041137 101041205 -65609091 - Lx6 LINE L1 -653 6807 6738 6 1355 234 0 0 0 chrX 101041205 101041231 -65609065 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 6 1355 2606 242 41 66 chrX 101041231 101041892 -65608404 - Lx6 LINE L1 -723 6737 6097 6 1355 295 283 46 28 chrX 101042003 101042112 -65608184 + L1M4c LINE L1 318 428 -6179 6 1355 390 355 27 27 chrX 101042221 101042444 -65607852 + L1M4c LINE L1 629 851 -5794 6 1355 240 286 64 32 chrX 101042512 101042606 -65607690 - L1MCa LINE L1 -4417 2091 1995 6 1355 1043 95 190 0 chrX 101042626 101042784 -65607512 - B2_Mm1t SINE B2 -5 188 1 6 1355 360 64 0 0 chrX 101042903 101042950 -65607346 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 1355 778 211 74 58 chrX 101043729 101043986 -65606310 - L1MCa LINE L1 -4808 1700 1440 6 1355 357 216 138 41 chrX 101044014 101044159 -65606137 - Lx8 LINE L1 -2 7471 7313 7 1355 1470 218 66 26 chrX 101044169 101044524 -65605772 - Lx8 LINE L1 -326 7147 6771 7 1355 314 226 297 43 chrX 101044518 101044703 -65605593 - L1MCa LINE L1 -5130 1378 1147 6 1355 297 310 24 12 chrX 101044821 101044906 -65605390 + RSINE1 SINE B4 3 88 -77 7 1355 1743 177 14 0 chrX 101044906 101045188 -65605108 - ORR1C1 LTR MaLR -92 286 1 7 1355 674 150 0 9 chrX 101045220 101045334 -65604962 - Lx7 LINE L1 -1481 6215 6103 7 1355 257 331 12 75 chrX 101045692 101045865 -65604431 - RMER4A LTR ERVK -279 187 26 7 1355 637 241 192 35 chrX 101045973 101046395 -65603901 + L1M4c LINE L1 2362 2849 -3900 6 1355 756 191 42 14 chrX 101046407 101046550 -65603746 + B1_Mus2 SINE Alu 1 147 0 7 1355 306 225 111 14 chrX 101046621 101046692 -65603604 + Tigger7 DNA MER2_type 231 308 -2183 7 1355 876 217 70 84 chrX 101046692 101046736 -65603560 - MT2A LTR ERVL -2 531 489 7 1355 507 33 0 0 chrX 101046736 101046797 -65603499 + (TTATA)n Simple_repeat Simple_repeat 5 65 0 7 1355 876 217 70 84 chrX 101046797 101047039 -65603257 - MT2A LTR ERVL -45 488 249 7 1355 319 232 82 31 chrX 101047373 101047471 -65602825 + RLTR42-int LTR ERVK 2867 2969 -2553 7 1355 15701 71 1 1 chrX 101047825 101050560 -65599736 - L1_Mus2 LINE L1 -1 6565 3831 8 1355 10805 150 10 16 chrX 101050563 101052334 -65597962 + Lx LINE L1 4067 5829 -54 8 1355 1458 75 16 0 chrX 101052334 101052520 -65597776 + B2_Mm1a SINE B2 4 192 -1 8 1355 10805 121 17 22 chrX 101052520 101053334 -65596962 + Lx LINE L1 5830 6654 0 8 1355 2205 52 11 7 chrX 101053543 101053814 -65596482 - L1Md_F2 LINE L1 0 6582 6311 8 1355 8034 44 7 1 chrX 101053828 101055126 -65595170 - L1Md_F2 LINE L1 0 6582 5275 8 1355 447 19 0 0 chrX 101055478 101055530 -65594766 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 1355 307 88 298 0 chrX 101055757 101055814 -65594482 - RMER19C LTR ERVK -537 74 1 8 1355 2457 151 0 0 chrX 101055814 101056184 -65594112 - Lx5 LINE L1 -471 6579 6210 8 169 267 308 18 71 chrX 101056442 101056610 -65593686 - L1MC4 LINE L1 -520 7522 7364 8 1356 333 0 0 0 chrX 101056677 101056714 -65593582 + (TTG)n Simple_repeat Simple_repeat 2 38 0 8 1356 265 273 0 92 chrX 101058012 101058121 -65592175 + PB1 SINE Alu 29 127 0 9 1356 323 241 12 12 chrX 101058127 101058207 -65592089 + ID4_ SINE ID 3 82 -1 9 1356 27 29 0 0 chrX 101058590 101058624 -65591672 + AT_rich Low_complexity Low_complexity 1 34 0 9 1356 208 327 181 23 chrX 101058642 101058858 -65591438 - MIR SINE MIR 0 262 13 9 1356 477 273 24 32 chrX 101059427 101059552 -65590744 - ID_B1 SINE B4 -19 205 82 9 1356 1694 247 58 70 chrX 101059662 101060266 -65590030 - RLTR18 LTR ERVK 0 616 20 9 1356 527 241 148 39 chrX 101060425 101060654 -65589642 + RMER20B LTR ERVK 146 399 -228 9 1356 1473 39 0 0 chrX 101060798 101060978 -65589318 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 9 1356 364 185 0 32 chrX 101060978 101061073 -65589223 + CT-rich Low_complexity Low_complexity 2 93 0 9 1356 4539 138 21 19 chrX 101061341 101062112 -65588184 + Lx LINE L1 5878 6649 -5 9 1356 244 303 0 0 chrX 101062120 101062196 -65588100 + L1M3 LINE L1 4903 4978 -1162 1 1356 316 231 199 82 chrX 101062217 101062363 -65587933 + RSINE1 SINE B4 3 165 0 1 1356 210 254 0 0 chrX 101062364 101062431 -65587865 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 1356 434 89 200 0 chrX 101062446 101062536 -65587760 + MusHAL1 LINE L1 2593 2700 -12 1 1356 305 245 96 19 chrX 101062956 101063060 -65587236 + RMER15 LTR ERVL 447 558 -17 1 1356 416 273 7 22 chrX 101063946 101064081 -65586215 + L1_Mur3 LINE L1 845 977 -6735 1 1356 282 104 0 0 chrX 101064079 101064127 -65586169 - L1_Mur3 LINE L1 -1716 4164 4117 1 1356 3015 187 40 110 chrX 101064130 101064594 -65585702 - L1_Mur3 LINE L1 -1927 3953 3508 1 1356 3137 126 57 15 chrX 101064594 101064612 -65585684 - Lx4B LINE L1 -1 7057 7041 1 1356 435 83 0 0 chrX 101064612 101064672 -65585624 + (TTCA)n Simple_repeat Simple_repeat 3 62 0 1 1356 3137 126 57 15 chrX 101064672 101065184 -65585112 - Lx4B LINE L1 -18 7040 6505 1 1356 3015 187 40 110 chrX 101065184 101065619 -65584677 - L1_Mur3 LINE L1 -2373 3507 3117 1 1356 20609 34 1 1 chrX 101065609 101068720 -65581576 - L1Md_F3 LINE L1 -15 6569 3465 1 1356 226 193 18 0 chrX 101068691 101068748 -65581548 - L1_Mur1 LINE L1 -2725 3161 3104 1 1356 352 304 88 38 chrX 101068750 101069023 -65581273 + L1_Rod LINE L1 1295 1579 -4268 1 1356 590 39 13 0 chrX 101069023 101069100 -65581196 + (GA)n Simple_repeat Simple_repeat 2 79 0 1 1356 352 304 88 38 chrX 101069100 101069222 -65581074 + L1_Rod LINE L1 1580 1710 -4137 1 1356 1863 208 49 20 chrX 101069222 101069629 -65580667 - MTD LTR MaLR 0 419 1 1 1356 1780 216 99 31 chrX 101069629 101070145 -65580151 - MTD-int LTR MaLR 0 1258 708 1 1356 408 117 60 197 chrX 101070157 101070274 -65580022 + MTC-int LTR MaLR 510 610 -648 1 1356 351 155 0 0 chrX 101070321 101070405 -65579891 + CT-rich Low_complexity Low_complexity 2 85 0 1 1356 234 62 0 0 chrX 101070405 101070437 -65579859 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1356 1343 218 18 4 chrX 101070460 101070736 -65579560 - Lx6 LINE L1 -4 7456 7177 1 1356 1322 91 11 16 chrX 101070736 101070926 -65579370 + B2_Mm1t SINE B2 2 190 -3 1 1356 1648 226 43 0 chrX 101070976 101071281 -65579015 - Lx6 LINE L1 -967 6493 6176 1 1356 3108 61 28 30 chrX 101071284 101071823 -65578473 - Lx3_Mus LINE L1 -984 6025 5494 1 1356 1721 215 30 18 chrX 101071825 101072223 -65578073 - Lx6 LINE L1 -1300 6160 5758 1 1356 3544 143 68 5 chrX 101072224 101073069 -65577227 - L1_Mur2 LINE L1 -4068 1809 889 1 1356 282 311 0 0 chrX 101074086 101074176 -65576120 - PB1D10 SINE Alu -4 113 24 1 1356 776 75 0 0 chrX 101075696 101075803 -65574493 + L1_Mus2 LINE L1 6458 6564 -2 1 1356 340 263 104 9 chrX 101076229 101076344 -65573952 + B1F SINE Alu 19 144 -5 1 1356 1061 194 74 55 chrX 101076691 101076947 -65573349 + ORR1C1 LTR MaLR 1 261 -117 1 1356 1328 193 32 18 chrX 101077000 101077280 -65573016 - MTD LTR MaLR -135 284 1 1 1356 308 208 14 14 chrX 101077283 101077356 -65572940 + L1_Mur3 LINE L1 1705 1777 -4103 1 1356 3924 165 40 9 chrX 101077570 101078549 -65571747 + L1_Mur3 LINE L1 915 1970 -3907 1 1356 229 235 29 48 chrX 101078517 101078620 -65571676 + Lx4B LINE L1 6954 7054 -4 1 1356 2401 169 38 0 chrX 101078627 101079048 -65571248 + Lx5 LINE L1 5441 5877 0 1 1356 318 176 193 64 chrX 101079061 101079170 -65571126 + RLTR11A LTR ERVK 1 123 -454 1 1356 585 242 0 50 chrX 101079166 101079305 -65570991 + RLTR11A LTR ERVK 289 420 -108 1 1356 282 257 0 14 chrX 101079276 101079347 -65570949 - RLTR11A LTR ERVK -121 407 338 1 1356 289 222 10 62 chrX 101079358 101079454 -65570842 - RLTR11A LTR ERVK 0 528 438 1 1356 6245 157 37 58 chrX 101079454 101079555 -65570741 + Lx5 LINE L1 5910 6024 -1026 1 1356 486 0 0 0 chrX 101079555 101079609 -65570687 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 1 1356 6245 157 37 58 chrX 101079609 101080652 -65569644 + Lx5 LINE L1 6025 7029 -21 1 1356 6871 77 17 105 chrX 101080655 101081458 -65568838 + L1_Mm LINE L1 2207 3009 -905 1 1356 743 86 0 0 chrX 101081458 101081563 -65568733 + B1_Mm SINE Alu 36 140 -7 1 1356 243 0 0 0 chrX 101081563 101081590 -65568706 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1356 6871 117 20 113 chrX 101081590 101081990 -65568306 + L1_Mm LINE L1 3010 3379 -2504 1 1356 786 190 36 0 chrX 101081990 101082127 -65568169 - B1_Mus2 SINE Alu -5 142 1 1 1356 5509 202 25 132 chrX 101082127 101082717 -65567579 + L1_Mm LINE L1 3380 3906 -1977 1 1356 309 273 0 0 chrX 101084024 101084090 -65566206 + L1_Mur3 LINE L1 3899 3964 -1916 1 1356 617 215 74 14 chrX 101084081 101084243 -65566053 + L1_Rod LINE L1 2098 2259 -3588 1 1356 823 168 184 0 chrX 101084243 101084433 -65565863 + URR1B DNA MER1_type 1 225 0 1 1356 246 274 114 30 chrX 101084433 101084449 -65565847 + L1_Rod LINE L1 2248 2264 -3622 1 1356 1558 186 131 3 chrX 101084492 101084655 -65565641 - ORR1D1 LTR MaLR -3 371 182 1 1356 675 0 0 0 chrX 101084655 101084730 -65565566 + (GA)n Simple_repeat Simple_repeat 1 75 0 1 1356 1558 186 131 3 chrX 101084730 101084895 -65565401 - ORR1D1 LTR MaLR -193 181 2 1 1356 32441 94 9 7 chrX 101084943 101089499 -65560797 - L1_Mus1 LINE L1 -1 6566 2016 1 1356 1348 84 20 31 chrX 101089499 101089695 -65560601 - B2_Mm2 SINE B2 0 195 2 1 1356 32441 122 59 7 chrX 101089695 101091232 -65559064 - L1_Mus1 LINE L1 -3868 2015 380 1 1356 254 140 140 0 chrX 101091239 101091296 -65559000 + MTC LTR MaLR 1 65 -356 1 1356 496 257 66 39 chrX 101092794 101093074 -65557222 + RMER20A LTR ERVK 186 466 -394 1 1356 728 314 67 55 chrX 101095623 101096175 -65554121 + MuRRS-int LTR ERV1 2544 3354 -4202 1 1356 1898 97 81 72 chrX 101096175 101096496 -65553800 + ORR1A2 LTR MaLR 4 327 0 1 1356 713 345 85 55 chrX 101096496 101096858 -65553438 + MuRRS-int LTR ERV1 3355 3722 -3834 1 1356 3430 38 2 2 chrX 101096858 101097254 -65553042 + MTA_Mm LTR MaLR 1 396 0 1 1356 9516 33 1 0 chrX 101097254 101098351 -65551945 + MTA_Mm-int LTR MaLR 1 1098 0 1 1356 3319 51 2 2 chrX 101098351 101098747 -65551549 + MTA_Mm LTR MaLR 1 396 0 1 1356 713 355 70 54 chrX 101098747 101098919 -65551377 + MuRRS-int LTR ERV1 3690 3856 -3750 1 1356 2394 105 88 3 chrX 101098919 101099282 -65551014 + ORR1B1 LTR MaLR 1 394 0 1 1356 383 367 52 52 chrX 101099282 101099683 -65550613 + MuRRS-int LTR ERV1 3857 4261 -3345 1 1356 240 35 0 0 chrX 101099692 101099721 -65550575 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1356 1490 27 10 84 chrX 101099755 101099957 -65550339 + B2_Mm1a SINE B2 1 187 -6 1 1356 724 286 72 47 chrX 101100467 101100914 -65549382 + MuRRS-int LTR ERV1 4740 5197 -2255 1 1356 773 291 46 42 chrX 101102593 101102932 -65547364 + RLTR14-int LTR ERV1 4876 5175 -142 1 1356 252 260 14 0 chrX 101103074 101103147 -65547149 + RLTR24 LTR ERV1 1 74 -455 1 1356 235 211 159 28 chrX 101103426 101103533 -65546763 + RLTR24 LTR ERV1 380 500 -29 1 1356 22 0 0 0 chrX 101104429 101104451 -65545845 + AT_rich Low_complexity Low_complexity 1 22 0 1 1356 385 236 85 33 chrX 101104477 101104630 -65545666 + RLTR19-int LTR ERVK 3189 3349 -2788 1 1356 372 289 57 136 chrX 101104752 101105192 -65545104 + RMER10A LTR ERVL 12 416 -26 1 1356 678 188 10 77 chrX 101105198 101105394 -65544902 + RLTR19-int LTR ERVK 3512 3694 -2443 1 1356 425 19 19 0 chrX 101105394 101105448 -65544848 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1 1356 541 227 61 92 chrX 101105697 101105925 -65544371 + RLTR19-int LTR ERVK 3754 3974 -2163 1 1356 1067 239 131 41 chrX 101105935 101106476 -65543820 + RLTR26 LTR ERVK 5 637 -5 1 1356 5388 136 36 38 chrX 101106497 101107404 -65542892 + MERVK26-int LTR ERVK 24 929 -5990 1 1356 470 145 0 24 chrX 101107408 101107470 -65542826 + polypyrimidine Low_complexity Low_complexity 65 125 0 1 1356 1008 101 0 0 chrX 101107470 101107648 -65542648 + (TCC)n Simple_repeat Simple_repeat 3 180 0 1 1356 470 145 0 24 chrX 101107648 101107680 -65542616 + polypyrimidine Low_complexity Low_complexity 34 64 0 1 1356 945 118 0 0 chrX 101107680 101107858 -65542438 + (TCC)n Simple_repeat Simple_repeat 3 180 0 1 1356 470 145 0 24 chrX 101107858 101107889 -65542407 + polypyrimidine Low_complexity Low_complexity 3 33 0 1 1356 21971 135 33 35 chrX 101107889 101107952 -65542344 + MERVK26-int LTR ERVK 911 973 -5946 1 1356 7818 49 0 0 chrX 101107952 101108883 -65541413 + L1Md_F2 LINE L1 5652 6582 0 1 1356 27041 133 28 30 chrX 101108883 101111712 -65538584 + MERVK26-int LTR ERVK 974 3796 -3123 1 1356 1513 94 0 0 chrX 101111712 101111904 -65538392 - B2_Mm2 SINE B2 -3 192 1 1 1356 27041 128 19 23 chrX 101111904 101115009 -65535287 + MERVK26-int LTR ERVK 3797 6919 0 1 1356 1573 258 71 39 chrX 101115012 101115568 -65534728 + RLTR26 LTR ERVK 5 606 -36 1 1356 296 325 0 54 chrX 101115684 101115814 -65534482 + RLTR19-int LTR ERVK 4037 4159 -1978 1 1356 546 221 48 35 chrX 101115946 101116091 -65534205 + RLTR19-int LTR ERVK 4228 4374 -1763 1 1356 1327 58 80 17 chrX 101116270 101116445 -65533851 + B2_Mm2 SINE B2 1 186 -9 1 1356 1958 153 8 55 chrX 101116810 101117177 -65533119 - ORR1B2 LTR MaLR 0 367 18 1 1356 191 95 0 45 chrX 101117648 101117692 -65532604 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 1 1356 208 155 40 40 chrX 101117703 101117777 -65532519 + (TTTG)n Simple_repeat Simple_repeat 2 75 0 1 1356 710 273 165 16 chrX 101118228 101118525 -65531771 - RLTR18B LTR ERVK -12 500 181 1 1356 299 204 88 136 chrX 101118525 101118650 -65531646 - RLTR18B LTR ERVK -235 277 159 1 1356 667 132 97 0 chrX 101118695 101118809 -65531487 - RLTR18-int LTR ERVK -29 5332 5208 1 1356 1208 105 6 0 chrX 101118809 101118980 -65531316 - B2_Mm1t SINE B2 -20 173 2 1 1356 1668 161 97 3 chrX 101118980 101119279 -65531017 - RLTR18-int LTR ERVK -141 5220 4894 1 1356 901 163 0 26 chrX 101119691 101119842 -65530454 - B1_Mus1 SINE Alu 0 148 2 1 1356 4384 102 91 21 chrX 101119976 101120678 -65529618 - RMER17A LTR ERVK 0 751 1 1 1356 1210 62 7 14 chrX 101120713 101120860 -65529436 + B1_Mus1 SINE Alu 1 146 -2 1 1356 2585 260 31 19 chrX 101120925 101121563 -65528733 + ETnERV-int LTR ERVK 747 1392 -1922 1 1356 1133 168 29 5 chrX 101121579 101121783 -65528513 + RLTR9A2 LTR ERVK 175 383 0 1 1356 1818 248 86 33 chrX 101122608 101123154 -65527142 - RLTR18-int LTR ERVK -486 4875 4301 1 1356 401 189 156 22 chrX 101123174 101123309 -65526987 - RLTR18-int LTR ERVK -1098 4263 4111 1 1356 1287 88 49 22 chrX 101123322 101123507 -65526789 + B2_Mm1t SINE B2 1 190 -3 1 1356 2954 167 58 9 chrX 101123538 101123952 -65526344 - RLTR31_Mm LTR ERVK 0 561 140 1 1356 195 42 0 0 chrX 101123952 101123976 -65526320 + (TTCC)n Simple_repeat Simple_repeat 2 25 0 1 1356 2954 167 58 9 chrX 101123976 101124094 -65526202 - RLTR31_Mm LTR ERVK -422 139 4 1 1356 1552 44 16 22 chrX 101124380 101124565 -65525731 + B2_Mm2 SINE B2 2 185 -10 1 1356 447 243 171 54 chrX 101124932 101125154 -65525142 - RLTR18-int LTR ERVK -2944 3193 2946 1 1356 905 186 101 105 chrX 101125158 101125570 -65524726 - RLTR18-int LTR ERVK -3516 2621 2000 1 1356 1561 63 21 0 chrX 101125570 101125759 -65524537 + B2_Mm1t SINE B2 1 193 0 1 1356 905 154 113 121 chrX 101125759 101125810 -65524486 - RLTR18-int LTR ERVK -3523 1999 1956 1 1356 275 234 16 0 chrX 101126080 101126144 -65524152 - RLTR18-int LTR ERVK -3659 1863 1799 1 1356 516 250 118 28 chrX 101126190 101126334 -65523962 - RLTR18-int LTR ERVK -3727 1795 1639 1 1356 3498 174 14 9 chrX 101126342 101126973 -65523323 - RLTR18-int LTR ERVK -1921 3440 2807 1 1356 492 281 0 0 chrX 101127103 101127199 -65523097 - RLTR18-int LTR ERVK -3176 2185 2090 1 1356 429 20 0 0 chrX 101127497 101127547 -65522749 + (TC)n Simple_repeat Simple_repeat 2 51 0 1 1356 330 87 0 0 chrX 101127547 101127592 -65522704 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1356 183 80 0 0 chrX 101127594 101127619 -65522677 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 1 1356 320 95 14 125 chrX 101127653 101127725 -65522571 - RLTR18-int LTR ERVK -5287 74 11 1 1356 1312 271 118 55 chrX 101127762 101128238 -65522058 - RLTR18B LTR ERVK -4 508 3 1 1356 1070 166 23 45 chrX 101128541 101128762 -65521534 + URR1A DNA MER1_type 1 216 -10 1 1356 1456 205 23 10 chrX 101129029 101129422 -65520874 + Lx9 LINE L1 5592 6031 -1613 1 1356 628 272 51 51 chrX 101129449 101129743 -65520553 + RLTR15 LTR ERVK 1 294 -65 1 1356 579 230 84 30 chrX 101129810 101129976 -65520320 + Lx9 LINE L1 6313 6487 -1157 1 1356 2330 234 75 14 chrX 101130126 101130643 -65519653 + Lx9 LINE L1 6493 7044 -600 1 1356 189 0 0 0 chrX 101130643 101130664 -65519632 + (CAA)n Simple_repeat Simple_repeat 3 23 0 1 1356 2330 234 75 14 chrX 101130664 101130722 -65519574 + Lx9 LINE L1 7045 7102 -542 1 1356 640 278 62 109 chrX 101130904 101131324 -65518972 + RMER10A LTR ERVL 18 417 -25 1 1356 1429 326 69 65 chrX 101131336 101131519 -65518777 + Lx8 LINE L1 6555 6712 -761 1 1356 1401 83 22 6 chrX 101131519 101131701 -65518595 + B2_Mm2 SINE B2 1 185 -10 1 1356 1429 326 69 65 chrX 101131701 101132361 -65517935 + Lx8 LINE L1 6713 7401 -72 1 1356 795 211 14 14 chrX 101132405 101132549 -65517747 + B1_Mus2 SINE Alu 2 145 -2 1 1356 310 121 333 18 chrX 101133352 101133460 -65516836 - B2_Mm2 SINE B2 -7 188 47 1 1356 1473 57 17 0 chrX 101133488 101133664 -65516632 - B2_Mm1t SINE B2 -14 179 1 1 1356 481 258 133 31 chrX 101134068 101134196 -65516100 - ID_B1 SINE B4 0 224 84 2 1356 234 259 37 0 chrX 101134163 101134217 -65516079 - MT2B LTR ERVL -309 292 237 2 1356 413 279 19 19 chrX 101134619 101134725 -65515571 - PB1D10 SINE Alu -2 115 10 2 1356 1438 49 10 47 chrX 101134823 101135015 -65515281 - B2_Mm2 SINE B2 -9 186 2 2 1356 1956 117 10 17 chrX 101135019 101135316 -65514980 - Lx2A1 LINE L1 -6 7002 6708 2 1356 581 292 0 14 chrX 101135778 101135993 -65514303 + L1_Rod LINE L1 900 1111 -6497 2 1356 642 256 27 5 chrX 101136026 101136211 -65514085 + L1_Rod LINE L1 1840 2028 -3819 2 1356 312 300 8 0 chrX 101136627 101136747 -65513549 + L1_Rod LINE L1 2026 2146 -3701 2 1356 22 0 0 0 chrX 101136758 101136780 -65513516 + AT_rich Low_complexity Low_complexity 1 22 0 2 1356 1703 187 33 11 chrX 101136892 101137255 -65513041 - Lx9 LINE L1 0 7644 7274 2 1356 607 55 11 32 chrX 101137293 101137387 -65512909 - L1Md_A LINE L1 -1 6581 6490 2 1356 1474 204 32 22 chrX 101137397 101137767 -65512529 - L1_Rod LINE L1 -4144 1703 1330 2 1356 391 293 70 14 chrX 101137767 101137785 -65512511 - B4 SINE B4 -62 230 86 2 1356 634 186 31 5 chrX 101137785 101137904 -65512392 - B1_Mus1 SINE Alu 0 120 1 2 1356 29 0 0 0 chrX 101137909 101137938 -65512358 + AT_rich Low_complexity Low_complexity 1 29 0 2 1356 1233 61 7 0 chrX 101137938 101138085 -65512211 + B1_Mus1 SINE Alu 1 148 0 2 1356 3212 175 94 19 chrX 101138091 101138719 -65511577 - RMER1B Other Other -17 1049 375 2 1356 1644 223 52 34 chrX 101138773 101139278 -65511018 + L1_Rod LINE L1 1234 1747 -4100 2 1356 3021 213 95 32 chrX 101139279 101139998 -65510298 + ORR1D-int LTR MaLR 468 1231 -139 2 1356 183 129 0 0 chrX 101140057 101140088 -65510208 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1356 1244 68 0 0 chrX 101140088 101140235 -65510061 - B1_Mm SINE Alu 0 147 1 2 1356 409 105 48 32 chrX 101140363 101140461 -65509835 + RMER4B LTR ERVK 2 96 -370 2 1356 703 233 0 0 chrX 101140528 101140674 -65509622 + Lx9 LINE L1 6600 6745 -899 2 1356 557 319 43 33 chrX 101140739 101140950 -65509346 + MT2A LTR ERVL 102 314 -219 2 1356 243 132 26 0 chrX 101140956 101140994 -65509302 + RLTR9A LTR ERVK 1 39 -329 2 1356 6296 114 11 17 chrX 101141033 101141965 -65508331 + RMER16-int LTR ERVK 2162 3087 -2319 2 1356 309 105 85 34 chrX 101141963 101142022 -65508274 + RMER16-int LTR ERVK 3559 3620 -1786 2 1356 2090 141 22 83 chrX 101142022 101142432 -65507864 - RLTR41 LTR ERV1 0 446 62 2 1356 4793 111 17 21 chrX 101142457 101143182 -65507114 + RMER16-int LTR ERVK 3617 4338 -1068 2 1356 663 288 8 25 chrX 101143177 101143419 -65506877 + RLTR6-int LTR ERV1 7387 7624 -154 2 1356 592 259 179 61 chrX 101143797 101144012 -65506284 + RLTR9A LTR ERVK 1 269 -99 2 1356 3362 6 0 0 chrX 101144012 101144358 -65505938 - ORR1A0 LTR MaLR 0 346 1 2 1356 592 259 179 61 chrX 101144358 101144471 -65505825 + RLTR9A LTR ERVK 270 368 0 2 1356 495 48 0 0 chrX 101144560 101144622 -65505674 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 2 1356 800 287 104 77 chrX 101145002 101145511 -65504785 + Lx9 LINE L1 6948 7470 -174 2 1356 3171 127 19 10 chrX 101145514 101146029 -65504267 + RLTR11A2 LTR ERVK 1 520 -7 2 1356 206 203 13 51 chrX 101146043 101146121 -65504175 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 2 1356 2072 118 10 10 chrX 101146158 101146466 -65503830 + ORR1A3 LTR MaLR 9 316 -10 2 1356 261 0 0 0 chrX 101146472 101146501 -65503795 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 1356 281 172 16 0 chrX 101146710 101146774 -65503522 + GA-rich Low_complexity Low_complexity 2 66 0 2 1356 1154 68 20 0 chrX 101146824 101146970 -65503326 + B1_Mur4 SINE Alu 2 150 0 2 1356 279 246 46 0 chrX 101147658 101147723 -65502573 - RSINE1 SINE B4 -54 111 44 2 1356 4503 160 102 12 chrX 101147790 101148291 -65502005 - RMER21A LTR ERV1 -9 938 419 2 1356 244 0 0 53 chrX 101148291 101148329 -65501967 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 2 1356 4503 160 102 12 chrX 101148329 101148687 -65501609 - RMER21A LTR ERV1 -529 418 1 2 1356 1302 47 0 0 chrX 101149079 101149227 -65501069 + B1_Mus1 SINE Alu 1 148 0 2 1356 1002 206 72 0 chrX 101149426 101149620 -65500676 + B3 SINE B2 1 208 -8 2 1356 1413 77 16 0 chrX 101150265 101150447 -65499849 - B2_Mm1t SINE B2 -8 185 1 2 1356 266 211 86 17 chrX 101150585 101150643 -65499653 - ID4_ SINE ID -2 81 20 2 1356 250 167 94 62 chrX 101150592 101150656 -65499640 - B4 SINE B4 -217 75 10 2 1356 1146 64 43 0 chrX 101151548 101151689 -65498607 + B1_Mus1 SINE Alu 2 148 0 2 1356 274 274 54 14 chrX 101151725 101151799 -65498497 + PB1D10 SINE Alu 7 83 -34 2 1356 252 210 15 46 chrX 101151823 101151888 -65498408 + ID4_ SINE ID 1 63 -20 2 1356 395 185 170 21 chrX 101153415 101153509 -65496787 + PB1D10 SINE Alu 2 109 -8 2 1356 458 269 40 40 chrX 101153776 101153900 -65496396 + B1F SINE Alu 20 143 -6 2 1356 192 40 0 0 chrX 101154588 101154613 -65495683 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 2 1356 234 289 184 133 chrX 101156062 101156333 -65493963 + MamSINE1 SINE tRNA 6 290 0 2 1356 1413 114 26 48 chrX 101159532 101159762 -65490534 + URR1B DNA MER1_type 1 225 0 2 1356 265 296 129 9 chrX 101160140 101160256 -65490040 - MER20 DNA MER1_type -89 130 1 2 1356 247 200 176 54 chrX 101160777 101160851 -65489445 - PB1D10 SINE Alu -65 83 1 2 1356 552 110 82 9 chrX 101161023 101161133 -65489163 + RMER17B LTR ERVK 343 460 -498 2 1356 234 0 0 0 chrX 101161134 101161160 -65489136 + (GA)n Simple_repeat Simple_repeat 1 26 0 2 1356 1260 43 0 0 chrX 101161515 101161654 -65488642 + B1_Mus2 SINE Alu 1 139 -8 2 1356 216 0 0 0 chrX 101161658 101161682 -65488614 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 2 1356 288 0 0 0 chrX 101161776 101161808 -65488488 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 1356 365 292 47 0 chrX 101162330 101162436 -65487860 - PB1D10 SINE Alu -6 111 1 2 1356 408 339 123 52 chrX 101162517 101162763 -65487533 + Cheshire DNA MER1_type 223 484 -1936 2 1356 1604 43 11 0 chrX 101162763 101162950 -65487346 - B2_Mm1t SINE B2 -3 190 2 2 1356 408 339 123 52 chrX 101162950 101163142 -65487154 + Cheshire DNA MER1_type 485 692 -1728 2 1356 774 200 120 5 chrX 101163152 101163343 -65486953 + Lx7 LINE L1 5768 5980 -1716 2 1356 234 218 198 0 chrX 101163350 101163451 -65486845 + Lx7 LINE L1 7559 7679 -17 2 1356 498 149 378 36 chrX 101163494 101163605 -65486691 - B1_Mur4 SINE Alu 0 150 2 2 1356 267 252 140 30 chrX 101163617 101163781 -65486515 + Cheshire DNA MER1_type 677 858 -1562 2 1356 722 223 82 39 chrX 101163874 101164107 -65486189 + Cheshire DNA MER1_type 1147 1389 -1031 2 1356 522 138 126 18 chrX 101164109 101164220 -65486076 - B1_Mur4 SINE Alu 0 150 28 2 1356 356 167 0 100 chrX 101164239 101164319 -65485977 - PB1D7 SINE Alu -2 118 47 2 1356 350 253 67 20 chrX 101164330 101164479 -65485817 + Cheshire DNA MER1_type 1435 1590 -830 2 1356 802 193 0 41 chrX 101164651 101164797 -65485499 + B1_Mur4 SINE Alu 2 141 -9 2 1356 720 212 52 26 chrX 101164821 101164976 -65485320 + B3 SINE B2 27 185 -31 2 1356 32 26 0 0 chrX 101165021 101165060 -65485236 + AT_rich Low_complexity Low_complexity 1 39 0 2 1356 347 295 98 24 chrX 101165304 101165509 -65484787 + Cheshire DNA MER1_type 2078 2297 -123 2 1356 216 316 0 34 chrX 101165512 101165571 -65484725 + B1F1 SINE Alu 2 58 -91 2 1356 1298 48 0 0 chrX 101165584 101165731 -65484565 - B1_Mus1 SINE Alu 0 148 2 2 1356 265 262 65 37 chrX 101165753 101165860 -65484436 - PB1D10 SINE Alu -7 110 1 2 1356 534 309 266 15 chrX 101166019 101166293 -65484003 + MLT1A0 LTR MaLR 23 365 0 2 1356 217 298 181 0 chrX 101166410 101166504 -65483792 + PB1D10 SINE Alu 7 117 0 2 1356 1254 34 0 0 chrX 101166991 101167139 -65483157 + B2_Mm2 SINE B2 1 148 -47 2 1356 180 0 0 0 chrX 101167139 101167159 -65483137 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 1356 1728 42 0 5 chrX 101167179 101167372 -65482924 + B2_Mm1t SINE B2 1 192 -1 2 1356 521 161 43 11 chrX 101167680 101167774 -65482522 + B1_Mur2 SINE Alu 13 109 -40 2 1356 528 279 21 49 chrX 101167879 101168022 -65482274 + B1_Mur1 SINE Alu 6 144 -5 2 1356 210 209 47 0 chrX 101169096 101169139 -65481157 + ID4_ SINE ID 16 60 -23 2 1356 241 335 81 61 chrX 101169421 101169618 -65480678 - MIRb SINE MIR -67 201 1 2 1356 463 218 0 25 chrX 101169744 101169824 -65480472 - ID4_ SINE ID -2 81 4 2 1356 217 259 0 0 chrX 101169848 101169902 -65480394 - B1F1 SINE Alu -91 58 5 2 1356 212 261 155 28 chrX 101170075 101170146 -65480150 - ID4_ SINE ID 0 83 4 2 1356 310 262 39 171 chrX 101170243 101170296 -65480000 + PB1D9 SINE Alu 1 49 -71 2 1356 1661 47 5 0 chrX 101170296 101170487 -65479809 + B2_Mm1t SINE B2 2 193 0 2 1356 310 262 39 171 chrX 101170487 101170562 -65479734 + PB1D9 SINE Alu 50 112 -8 2 1356 324 297 0 0 chrX 101170658 101170722 -65479574 + ID4 SINE ID 18 81 -2 2 1356 640 208 146 0 chrX 101170813 101170943 -65479353 + B1_Mur4 SINE Alu 1 149 -1 2 1356 434 240 45 4 chrX 101171068 101171178 -65479118 + PB1D9 SINE Alu 1 117 0 2 1356 786 265 35 5 chrX 101171194 101171391 -65478905 + B3 SINE B2 1 203 -13 2 1356 378 270 44 18 chrX 101171887 101172000 -65478296 + PB1D10 SINE Alu 1 116 -1 2 1356 204 40 0 0 chrX 101172001 101172026 -65478270 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 2 1356 318 277 146 19 chrX 101172032 101172135 -65478161 + B1_Mur4 SINE Alu 30 145 -5 2 1356 1350 66 49 6 chrX 101172146 101172329 -65477967 + B2_Mm1t SINE B2 1 191 -2 2 1356 22 35 0 0 chrX 101173104 101173133 -65477163 + AT_rich Low_complexity Low_complexity 1 29 0 2 1356 1175 82 14 0 chrX 101173328 101173474 -65476822 - B1_Mus1 SINE Alu 0 148 1 2 1356 307 322 15 92 chrX 101173532 101173662 -65476634 - PB1 SINE Alu 0 127 8 2 1356 21 82 0 0 chrX 101174030 101174079 -65476217 + AT_rich Low_complexity Low_complexity 1 49 0 2 1356 556 184 114 0 chrX 101174262 101174376 -65475920 + B1_Mus2 SINE Alu 15 141 -6 2 1356 276 149 0 0 chrX 101174382 101174429 -65475867 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 2 1356 236 332 141 69 chrX 101177004 101177266 -65473030 - L2a LINE L2 -5 3421 3141 2 1356 1007 116 20 13 chrX 101177607 101177756 -65472540 + B1_Mur4 SINE Alu 1 150 0 3 1356 1296 131 16 0 chrX 101177948 101178139 -65472157 + B2_Mm2 SINE B2 2 195 0 3 1356 1224 35 35 0 chrX 101178146 101178288 -65472008 + B1_Mus1 SINE Alu 2 148 0 3 1356 559 232 0 3 chrX 101178297 101178422 -65471874 + B1F SINE Alu 18 141 -8 3 1356 263 321 26 70 chrX 101178414 101178528 -65471768 - PB1D10 SINE Alu -8 109 1 3 1356 585 266 36 0 chrX 101178586 101178725 -65471571 + B1F SINE Alu 1 144 -5 3 1356 195 129 0 0 chrX 101178931 101178962 -65471334 + (GGGA)n Simple_repeat Simple_repeat 2 32 0 3 1356 26 0 0 0 chrX 101180172 101180198 -65470098 + AT_rich Low_complexity Low_complexity 1 26 0 3 1356 1513 68 16 10 chrX 101180726 101180920 -65469376 + B2_Mm2 SINE B2 1 195 0 3 1356 24 53 0 0 chrX 101181096 101181134 -65469162 + AT_rich Low_complexity Low_complexity 1 38 0 3 1356 231 36 0 0 chrX 101181476 101181504 -65468792 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1356 23 33 0 0 chrX 101182904 101182934 -65467362 + AT_rich Low_complexity Low_complexity 1 30 0 3 1356 186 43 0 0 chrX 101182944 101182967 -65467329 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 3 1356 342 320 35 43 chrX 101182971 101183101 -65467195 - B1F2 SINE Alu -13 137 9 3 1356 896 109 129 43 chrX 101183165 101183328 -65466968 + B2_Mm2 SINE B2 5 181 -14 3 1356 1241 55 0 0 chrX 101183609 101183755 -65466541 + B1_Mm SINE Alu 2 147 0 3 1356 684 311 32 16 chrX 101183965 101184151 -65466145 - B4 SINE B4 -12 280 92 3 1356 1013 143 0 7 chrX 101184365 101184513 -65465783 + B1_Mur3 SINE Alu 1 147 -2 3 1356 5159 214 79 46 chrX 101184524 101185858 -65464438 - L1_Mur3 LINE L1 -953 4927 3520 3 1356 998 96 129 62 chrX 101185858 101186036 -65464260 + B2_Mm2 SINE B2 1 190 -5 3 1356 5159 214 79 46 chrX 101186036 101186174 -65464122 - L1_Mur3 LINE L1 -2361 3519 3407 3 1356 667 274 1 16 chrX 101186166 101186364 -65463932 - Lx6 LINE L1 -13 7447 7273 3 1356 239 220 0 0 chrX 101186381 101186431 -65463865 - Lx6 LINE L1 -138 7322 7273 3 1356 239 220 0 0 chrX 101186425 101186475 -65463821 - Lx6 LINE L1 -138 7322 7273 3 1356 239 220 0 0 chrX 101186513 101186563 -65463733 - Lx6 LINE L1 -138 7322 7273 3 1356 239 220 0 0 chrX 101186557 101186607 -65463689 - Lx6 LINE L1 -138 7322 7273 3 1356 2394 272 102 6 chrX 101186645 101187484 -65462812 - Lx6 LINE L1 -138 7322 6168 3 1357 396 0 0 0 chrX 101187600 101187644 -65462652 + (TCTA)n Simple_repeat Simple_repeat 3 46 0 3 1357 615 206 0 0 chrX 101187652 101187759 -65462537 - B1_Mur2 SINE Alu -40 109 3 3 1357 362 220 0 130 chrX 101187659 101187774 -65462522 - MT2B LTR ERVL -346 255 156 3 1357 513 27 40 0 chrX 101187800 101187875 -65462421 + (TTTC)n Simple_repeat Simple_repeat 2 79 0 3 1357 956 89 30 17 chrX 101187877 101188024 -65462272 - B1_Mm SINE Alu 0 311 21 3 1357 25 0 0 0 chrX 101188056 101188081 -65462215 + AT_rich Low_complexity Low_complexity 1 25 0 3 1357 963 210 129 0 chrX 101189027 101189213 -65461083 - B3 SINE B2 -6 210 1 3 1357 641 246 0 42 chrX 101189215 101189359 -65460937 - B1_Mur4 SINE Alu -1 149 12 3 1357 658 257 14 0 chrX 101189363 101189503 -65460793 - ID_B1 SINE B4 0 224 83 3 1357 222 301 20 88 chrX 101189735 101189837 -65460459 + L2c LINE L2 3277 3371 -16 3 1357 2217 146 25 97 chrX 101191546 101191949 -65458347 + ORR1D1 LTR MaLR 1 374 0 3 1357 23 33 0 0 chrX 101192170 101192200 -65458096 + AT_rich Low_complexity Low_complexity 1 30 0 3 1357 330 26 0 0 chrX 101192233 101192272 -65458024 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1357 513 0 0 0 chrX 101192272 101192328 -65457968 + (GA)n Simple_repeat Simple_repeat 1 57 0 3 1357 315 330 36 27 chrX 101192328 101192440 -65457856 - RSINE1 SINE B4 -50 115 3 3 1357 550 249 50 66 chrX 101192610 101192648 -65457648 - B2_Mm2 SINE B2 0 195 163 3 1357 189 0 0 0 chrX 101192648 101192669 -65457627 + (TA)n Simple_repeat Simple_repeat 2 22 0 3 1357 709 201 170 0 chrX 101192669 101192828 -65457468 - B3 SINE B2 -30 186 1 3 1357 523 223 36 0 chrX 101192945 101193057 -65457239 - B1F SINE Alu -8 141 26 3 1357 1997 225 213 30 chrX 101193057 101193706 -65456590 + RMER13A LTR ERVK 1 768 -92 3 1357 1224 68 0 0 chrX 101193725 101193872 -65456424 - B1_Mus1 SINE Alu 0 148 2 3 1357 233 158 0 50 chrX 101193928 101193968 -65456328 - ID4_ SINE ID -14 69 32 3 1357 431 202 12 12 chrX 101193978 101194063 -65456233 + B3 SINE B2 132 216 0 3 1357 363 44 0 0 chrX 101194217 101194262 -65456034 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 3 1357 345 307 57 0 chrX 101194263 101194351 -65455945 - PB1D10 SINE Alu -13 104 12 3 1357 264 100 0 0 chrX 101194397 101194437 -65455859 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1357 1522 236 89 65 chrX 101194711 101195215 -65455081 + RMER13A LTR ERVK 34 549 -311 3 1357 340 301 26 34 chrX 101195686 101195803 -65454493 - ID_B1 SINE B4 0 224 109 3 1357 192 143 0 0 chrX 101195887 101195929 -65454367 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 3 1357 396 0 0 0 chrX 101195967 101196011 -65454285 + (CTCA)n Simple_repeat Simple_repeat 2 45 0 3 1357 896 174 0 11 chrX 101196015 101196195 -65454101 + CT-rich Low_complexity Low_complexity 1 178 0 3 1357 704 170 0 0 chrX 101196711 101196817 -65453479 - U6 snRNA snRNA 0 107 2 3 1357 281 179 161 0 chrX 101196817 101196864 -65453432 - PB1D10 SINE Alu -40 77 22 3 1357 416 323 101 108 chrX 101196911 101197052 -65453244 - MLT2B2 LTR ERVL -2 513 373 3 1357 5556 58 4 26 chrX 101197052 101197743 -65452553 - L1Md_F2 LINE L1 -1 6581 5906 3 1357 416 323 101 108 chrX 101197743 101198118 -65452178 - MLT2B2 LTR ERVL -143 372 1 3 1357 1034 205 63 0 chrX 101198145 101198335 -65451961 - B3 SINE B2 0 216 15 3 1357 311 243 64 18 chrX 101198363 101198472 -65451824 - L1M4 LINE L1 -883 5263 5150 3 1357 618 205 0 24 chrX 101198476 101198601 -65451695 - Lx8 LINE L1 -949 6524 6403 3 1357 252 213 0 21 chrX 101198658 101198706 -65451590 - ID_B1 SINE B4 -3 221 175 3 1357 312 274 10 40 chrX 101198754 101198853 -65451443 + L1ME2 LINE L1 4895 4990 -1156 3 1357 418 215 25 0 chrX 101198878 101198957 -65451339 + ID4 SINE ID 1 81 -2 3 1357 845 309 28 60 chrX 101199543 101199980 -65450316 + RLTR14-int LTR ERV1 4895 5317 0 3 1357 880 269 27 5 chrX 101199980 101200204 -65450092 + RLTR14 LTR ERV1 1 229 -153 3 1357 1511 78 0 15 chrX 101200690 101200885 -65449411 + B2_Mm2 SINE B2 2 193 -2 3 1357 465 260 39 7 chrX 101200998 101201153 -65449143 + L1ME2 LINE L1 5817 5976 -188 3 1357 219 36 0 0 chrX 101201201 101201229 -65449067 + (T)n Simple_repeat Simple_repeat 1 28 0 3 1357 975 49 164 0 chrX 101201240 101201362 -65448934 - B1_Mus1 SINE Alu -5 143 2 3 1357 238 231 39 0 chrX 101201443 101201495 -65448801 + L1ME2 LINE L1 6012 6065 -97 3 1357 481 216 10 0 chrX 101201610 101201712 -65448584 - ORR1D2 LTR MaLR -267 103 1 3 1357 422 276 76 25 chrX 101202230 101202349 -65447947 - ID_B1 SINE B4 -5 219 95 3 1357 285 75 0 0 chrX 101202430 101202470 -65447826 + (TCTG)n Simple_repeat Simple_repeat 3 42 0 3 1357 381 299 43 7 chrX 101202580 101202718 -65447578 - B1F SINE Alu -5 144 2 3 1357 414 0 0 0 chrX 101202919 101202965 -65447331 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 1357 239 93 23 0 chrX 101203132 101203175 -65447121 + (GGGA)n Simple_repeat Simple_repeat 1 44 0 3 1357 590 210 19 13 chrX 101203371 101203532 -65446764 - MTEb LTR MaLR 0 379 219 3 1357 4276 154 33 80 chrX 101203513 101204442 -65445854 + RLTR13C1 LTR ERVK 98 983 0 3 1357 2102 167 16 19 chrX 101204528 101204895 -65445401 - ORR1D1 LTR MaLR -8 366 1 3 1357 639 265 15 8 chrX 101204920 101205053 -65445243 + B1_Mur1 SINE Alu 3 136 -13 3 1357 298 225 87 33 chrX 101205251 101205343 -65444953 - MTEb LTR MaLR -115 264 168 3 1357 347 106 0 15 chrX 101205343 101205410 -65444886 + (TC)n Simple_repeat Simple_repeat 2 67 0 3 1357 998 130 78 56 chrX 101205432 101205611 -65444685 - B2_Mm2 SINE B2 -12 183 1 3 1357 587 167 33 66 chrX 101205618 101205721 -65444575 - MTEb LTR MaLR -204 175 72 3 1357 5601 65 53 7 chrX 101205721 101206432 -65443864 + Lx3_Mus LINE L1 6266 7009 0 3 1357 587 167 33 66 chrX 101206432 101206450 -65443846 - MTEb LTR MaLR -308 71 58 3 1357 384 250 12 0 chrX 101206457 101206541 -65443755 - MTEb LTR MaLR -294 85 1 3 1357 226 286 0 45 chrX 101206542 101206608 -65443688 + MLT1A LTR MaLR 25 87 -287 3 1357 937 166 0 7 chrX 101206771 101206917 -65443379 - B1_Mus2 SINE Alu -2 145 1 3 1357 311 296 73 18 chrX 101206947 101207057 -65443239 + B4 SINE B4 37 152 -140 3 1357 667 132 72 72 chrX 101206998 101207137 -65443159 + B1_Mm SINE Alu 9 147 0 3 1357 488 281 22 52 chrX 101207141 101207276 -65443020 + RSINE1 SINE B4 3 133 -32 3 1357 441 0 0 0 chrX 101207306 101207355 -65442941 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1357 803 363 103 38 chrX 101207413 101208023 -65442273 + MTE-int LTR MaLR 3 652 -928 3 1357 726 158 94 0 chrX 101208069 101208196 -65442100 + B1_Mur3 SINE Alu 9 147 -2 3 1357 219 152 0 0 chrX 101208228 101208274 -65442022 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 3 1357 569 280 88 0 chrX 101208283 101208408 -65441888 - RSINE1 SINE B4 -29 136 1 3 1357 484 358 83 37 chrX 101208441 101208789 -65441507 + MTE-int LTR MaLR 725 1088 -492 3 1357 1540 130 45 4 chrX 101209266 101209513 -65440783 - Lx3A LINE L1 -7 6974 6718 3 1357 2284 130 23 71 chrX 101209542 101209938 -65440358 - ORR1B1 LTR MaLR -2 392 16 3 1357 424 307 0 26 chrX 101209994 101210111 -65440185 - B1F2 SINE Alu -29 120 7 3 1357 1169 88 7 13 chrX 101210332 101210482 -65439814 - B1_Mur4 SINE Alu 0 150 2 3 1357 394 254 32 73 chrX 101210875 101210998 -65439298 - B1F1 SINE Alu -7 142 25 3 1357 623 160 20 13 chrX 101211021 101211173 -65439123 + CT-rich Low_complexity Low_complexity 5 157 0 3 1357 789 206 15 0 chrX 101211183 101211319 -65438977 - B1_Mur4 SINE Alu 0 150 13 3 1357 410 308 45 97 chrX 101211184 101211360 -65438936 - B4 SINE B4 -67 225 59 3 1357 651 100 0 0 chrX 101211589 101211699 -65438597 + (TG)n Simple_repeat Simple_repeat 2 111 0 4 1357 612 288 7 0 chrX 101211712 101211851 -65438445 - RSINE1 SINE B4 -22 143 4 4 1357 570 214 77 31 chrX 101211946 101212076 -65438220 - B1_Mur1 SINE Alu -13 136 1 4 1357 494 232 10 39 chrX 101212077 101212180 -65438116 - ID_B1 SINE B4 -40 184 85 4 1357 21 82 0 0 chrX 101212391 101212440 -65437856 + AT_rich Low_complexity Low_complexity 1 49 0 4 1357 236 273 45 0 chrX 101213267 101213333 -65436963 + L1M5 LINE L1 5708 5776 -403 4 1357 627 218 21 21 chrX 101213441 101213586 -65436710 - RMER10A LTR ERVL 0 398 254 4 1357 524 272 171 12 chrX 101213560 101213806 -65436490 + MTEa LTR MaLR 89 373 -6 4 1357 281 355 126 17 chrX 101214355 101214530 -65435766 - MIRb SINE MIR -32 236 43 4 1357 531 319 138 17 chrX 101214568 101214923 -65435373 + MLT1C LTR MaLR 65 462 -5 4 1357 774 216 13 0 chrX 101215288 101215441 -65434855 - RMER10A LTR ERVL -287 155 1 4 1357 418 253 12 88 chrX 101215629 101215650 -65434646 + ID_B1 SINE B4 76 223 -1 4 1357 717 185 22 29 chrX 101215650 101215789 -65434507 + B1_Mur1 SINE Alu 11 148 -1 4 1357 1018 132 14 0 chrX 101215880 101216024 -65434272 + B1_Mur4 SINE Alu 3 148 -2 4 1357 668 74 11 0 chrX 101216030 101216125 -65434171 + (GAAA)n Simple_repeat Simple_repeat 4 99 0 4 1357 212 179 0 0 chrX 101216384 101216423 -65433873 + A-rich Low_complexity Low_complexity 1 39 0 4 1357 872 207 0 7 chrX 101216751 101216902 -65433394 - B1_Mur4 SINE Alu 0 150 1 4 1357 947 284 28 0 chrX 101216905 101217120 -65433176 - ID_B1 SINE B4 -1 223 3 4 1357 504 32 0 0 chrX 101217145 101217207 -65433089 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 1357 3709 166 57 13 chrX 101217238 101217908 -65432388 - Lx7 LINE L1 -383 7313 6615 4 1357 4066 117 34 37 chrX 101217909 101218647 -65431649 + RMER17A LTR ERVK 1 736 -15 4 1357 2893 233 220 6 chrX 101218649 101218708 -65431588 - Lx7 LINE L1 -1091 6605 6499 4 1357 1209 84 0 0 chrX 101218708 101218875 -65431421 + (TTTTC)n Simple_repeat Simple_repeat 5 171 0 4 1357 9684 169 78 20 chrX 101218875 101221274 -65429022 - Lx7 LINE L1 -962 6498 3916 4 1357 6268 116 51 24 chrX 101221279 101222243 -65428053 - Lx2 LINE L1 -8 6989 6000 4 1357 1146 86 43 0 chrX 101222266 101222428 -65427868 - B2_Mm2 SINE B2 0 195 27 4 1357 3013 46 3 3 chrX 101222428 101222800 -65427496 - L1_Mus4 LINE L1 -678 5958 5587 4 1357 555 318 70 29 chrX 101222947 101223190 -65427106 - MT2A LTR ERVL -70 463 211 4 1357 2303 135 103 26 chrX 101223234 101223659 -65426637 - RMER19B LTR ERVK 0 902 445 4 1357 244 316 42 0 chrX 101223664 101223759 -65426537 + Tigger1 DNA MER2_type 2319 2417 -1 4 1357 726 319 48 41 chrX 101223791 101224082 -65426214 - ERVL-B4-int LTR ERVL -596 5118 4826 4 1357 375 322 31 82 chrX 101224084 101224243 -65426053 + MTEa LTR MaLR 1 151 -228 4 1357 4672 148 74 61 chrX 101224258 101225148 -65425148 + RMER19B LTR ERVK 1 902 0 4 1357 3178 237 88 55 chrX 101225149 101225567 -65424729 - L1_Mur3 LINE L1 -2606 3274 2895 4 1357 1272 48 7 0 chrX 101225567 101225713 -65424583 - B1_Mus2 SINE Alu 0 147 1 4 1357 3178 237 88 55 chrX 101225713 101226533 -65423763 - L1_Mur3 LINE L1 -2986 2894 1995 4 1357 189 147 0 0 chrX 101226635 101226669 -65423627 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1357 510 248 49 42 chrX 101226688 101226831 -65423465 + B1F SINE Alu 6 149 0 4 1357 335 317 0 12 chrX 101226836 101226919 -65423377 + ID4_ SINE ID 2 83 0 4 1357 2349 278 92 36 chrX 101226927 101227335 -65422961 - Tigger1 DNA MER2_type -1454 964 526 4 1357 285 29 0 0 chrX 101227335 101227369 -65422927 + (TC)n Simple_repeat Simple_repeat 1 34 0 4 1357 1214 68 7 0 chrX 101227377 101227523 -65422773 - B1_Mm SINE Alu 0 147 1 4 1357 2349 278 92 36 chrX 101227523 101227996 -65422300 - Tigger1 DNA MER2_type -1900 518 24 4 1357 604 242 6 77 chrX 101228017 101228187 -65422109 + ERVL-B4-int LTR ERVL 5206 5363 -351 4 1357 180 0 0 0 chrX 101228197 101228217 -65422079 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 4 1357 1142 81 0 48 chrX 101228217 101228385 -65421911 - B2_Mm2 SINE B2 -34 161 2 4 1357 906 236 99 30 chrX 101228636 101228898 -65421398 - B4A SINE B4 -10 282 3 4 1357 761 272 106 21 chrX 101228912 101229299 -65420997 - L1_Mur3 LINE L1 -2415 3465 3046 4 1357 677 54 21 0 chrX 101229502 101229595 -65420701 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 4 1357 329 203 41 55 chrX 101230066 101230139 -65420157 - PB1D10 SINE Alu -10 107 36 4 1357 889 154 35 14 chrX 101230173 101230318 -65419978 - B1_Mur4 SINE Alu -2 148 1 4 1357 650 227 121 0 chrX 101230318 101230449 -65419847 - B1_Mur2 SINE Alu -1 148 1 4 1357 1028 168 33 11 chrX 101230567 101230748 -65419548 - B2_Mm2 SINE B2 -10 185 1 4 1357 552 266 6 28 chrX 101230752 101230930 -65419366 - L1MD LINE L1 -3301 2845 2672 4 1357 213 39 0 0 chrX 101231121 101231147 -65419149 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 4 1357 575 298 105 60 chrX 101231164 101231233 -65419063 - Lx8 LINE L1 -17 7456 7360 4 1357 204 40 0 0 chrX 101231233 101231258 -65419038 + (CATCC)n Simple_repeat Simple_repeat 3 27 0 4 1357 575 298 105 60 chrX 101231258 101231520 -65418776 - Lx8 LINE L1 -114 7359 7110 4 1357 2143 158 16 32 chrX 101231527 101231899 -65418397 - RLTR17 LTR ERVK -326 366 1 4 1357 4885 179 67 31 chrX 101231904 101232275 -65418021 - RMER3D-int LTR ERVK -5 2837 2467 4 1357 183 80 0 0 chrX 101232275 101232300 -65417996 + (CCTA)n Simple_repeat Simple_repeat 3 27 0 4 1357 4885 179 67 31 chrX 101232300 101233035 -65417261 - RMER3D-int LTR ERVK -376 2466 1692 4 1357 195 69 0 0 chrX 101233041 101233070 -65417226 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 4 1357 966 187 23 0 chrX 101233134 101233305 -65416991 - RMER3D-int LTR ERVK -1136 1706 1532 4 1357 2809 164 11 17 chrX 101233337 101233859 -65416437 - RMER3D-int LTR ERVK -1309 1533 1015 4 1357 622 138 51 17 chrX 101233897 101234015 -65416281 - RMER3D-int LTR ERVK -2232 610 489 4 1357 1610 216 64 45 chrX 101234104 101234612 -65415684 - RMER3D-int LTR ERVK -1993 849 1 4 1357 2616 186 26 29 chrX 101234612 101235104 -65415192 - RLTR17 LTR ERVK 0 692 202 4 1357 1393 308 32 5 chrX 101235106 101235517 -65414779 - Lx7 LINE L1 -585 7111 6690 4 1357 516 282 7 0 chrX 101235552 101235694 -65414602 - Lx9 LINE L1 -174 7470 7328 4 1357 466 317 123 62 chrX 101235746 101236086 -65414210 + RLTR9A LTR ERVK 8 368 0 4 1357 3029 273 104 20 chrX 101236087 101236989 -65413307 - Lx9 LINE L1 -310 7334 6357 4 1357 189 0 0 0 chrX 101236998 101237019 -65413277 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 1357 2943 72 39 3 chrX 101237019 101237408 -65412888 - L1_Mus3 LINE L1 -22 6616 6214 4 1357 764 210 0 7 chrX 101237636 101237780 -65412516 - B1_Mus2 SINE Alu 0 147 5 4 1357 315 283 33 58 chrX 101237821 101237941 -65412355 - PB1D10 SINE Alu 0 117 1 4 1357 584 295 29 46 chrX 101237941 101238019 -65412277 - ID SINE ID -149 75 1 4 1357 389 243 42 59 chrX 101238042 101238160 -65412136 - PB1D10 SINE Alu -1 116 1 4 1357 1188 276 67 30 chrX 101238215 101238618 -65411678 + RLTR28B LTR ERVL 23 440 -41 4 1357 923 257 71 68 chrX 101239735 101240223 -65410073 + MYSERV6-int LTR ERVK 7256 7508 -1451 4 1357 1682 149 97 149 chrX 101240450 101240885 -65409411 + RMER19B LTR ERVK 1 412 -490 4 1357 1652 42 21 0 chrX 101241083 101241272 -65409024 - B2_Mm1t SINE B2 0 193 1 4 1357 409 236 113 59 chrX 101241476 101241579 -65408717 + MYSERV6-int LTR ERVK 3754 3860 -2277 4 1357 1237 55 0 7 chrX 101241579 101241726 -65408570 - B1_Mus2 SINE Alu -1 146 1 4 1357 622 260 85 116 chrX 101241726 101241991 -65408305 + MYSERV6-int LTR ERVK 2614 2843 -395 4 1357 811 57 194 47 chrX 101241991 101242120 -65408176 + B1_Mus1 SINE Alu 1 148 0 4 1357 622 275 68 150 chrX 101242120 101242406 -65407890 + MYSERV6-int LTR ERVK 2844 3116 -122 4 1357 1346 218 49 52 chrX 101242503 101242928 -65407368 + RLTR28B LTR ERVL 1 424 -57 4 1357 358 344 56 0 chrX 101243058 101243183 -65407113 + MIR SINE MIR 13 144 -118 4 1357 2098 89 116 53 chrX 101243218 101243573 -65406723 - L1_Mus2 LINE L1 -1 6565 6189 4 1357 2987 36 2 144 chrX 101243579 101244029 -65406267 - RLTR10 LTR ERVK -4 386 1 4 1357 16730 27 15 1 chrX 101244031 101245948 -65404348 - RLTR10-int LTR ERVK -3 1984 41 4 1357 3053 39 2 111 chrX 101245964 101246397 -65403899 - RLTR10 LTR ERVK -4 386 1 4 1357 4420 52 11 0 chrX 101246397 101246935 -65403361 - L1_Mus2 LINE L1 -372 6194 5651 4 1357 228 357 45 0 chrX 101247864 101247976 -65402320 + MLT1I LTR MaLR 252 368 -43 4 1357 459 279 26 18 chrX 101248644 101248757 -65401539 - PB1D10 SINE Alu 0 117 4 4 1357 607 306 57 40 chrX 101248945 101249245 -65401051 - Lx9 LINE L1 -204 7440 7136 4 1357 1593 47 5 30 chrX 101249245 101249442 -65400854 - B2_Mm1t SINE B2 0 193 2 4 1357 276 258 41 92 chrX 101249447 101249604 -65400692 + L1MA8 LINE L1 6105 6252 -39 4 1357 439 283 75 0 chrX 101249604 101249710 -65400586 - PB1D10 SINE Alu 0 117 4 4 1357 276 258 41 92 chrX 101249710 101249748 -65400548 + L1MA8 LINE L1 6253 6290 -1 4 1357 439 212 144 144 chrX 101249751 101249966 -65400330 + B3 SINE B2 2 216 0 4 1357 1030 206 22 0 chrX 101249983 101250167 -65400129 - B3 SINE B2 -28 188 1 4 1357 292 318 115 10 chrX 101250241 101250441 -65399855 + L1M4b LINE L1 22 242 -7092 4 1357 261 330 108 49 chrX 101250587 101250606 -65399690 + ID_B1 SINE B4 68 92 -132 4 1357 361 272 141 0 chrX 101250606 101250698 -65399598 + PB1D10 SINE Alu 1 105 -12 4 1357 2702 184 11 134 chrX 101251926 101252622 -65397674 - RMER19C LTR ERVK 0 611 1 4 1357 230 274 32 103 chrX 101253606 101253732 -65396564 + RMER4A LTR ERVK 53 169 -297 4 1357 268 242 14 83 chrX 101254171 101254243 -65396053 + B1_Mur1 SINE Alu 76 142 -7 4 1357 660 158 0 66 chrX 101254319 101254441 -65395855 + Lx9 LINE L1 5519 5632 -215 4 1357 3144 188 38 33 chrX 101254441 101255080 -65395216 + RLTR26 LTR ERVK 1 642 0 4 1357 2512 305 91 47 chrX 101255080 101255572 -65394724 + Lx9 LINE L1 5661 6181 -1292 4 1357 477 0 0 0 chrX 101255572 101255625 -65394671 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1357 2830 268 34 35 chrX 101255625 101256425 -65393871 + Lx9 LINE L1 6182 7141 -503 4 1357 474 288 52 61 chrX 101256411 101256489 -65393807 + Lx9 LINE L1 6017 6085 -1388 4 1357 1391 207 221 3 chrX 101256489 101256833 -65393463 - MTD LTR MaLR 0 419 1 4 1357 474 288 52 61 chrX 101256833 101256936 -65393360 + Lx9 LINE L1 6086 6189 -1284 4 1357 243 0 0 0 chrX 101256936 101256963 -65393333 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 1357 474 288 52 61 chrX 101256963 101257009 -65393287 + Lx9 LINE L1 6190 6242 -1231 4 1357 1022 279 24 57 chrX 101257007 101257338 -65392958 + Lx9 LINE L1 6425 6744 -729 4 1357 1362 217 63 8 chrX 101257335 101257716 -65392580 + L1_Mur2 LINE L1 943 1344 -5742 4 1357 3039 76 0 0 chrX 101257727 101258121 -65392175 + L1_Mus3 LINE L1 5693 6086 -552 4 1357 3148 122 45 0 chrX 101258123 101258565 -65391731 + Lx4A LINE L1 6597 7058 0 4 1357 5362 181 61 13 chrX 101258586 101258753 -65391543 + L1_Mur2 LINE L1 1605 1767 -4110 4 1357 3310 99 35 0 chrX 101258753 101259188 -65391108 - L1_Mus3 LINE L1 0 6638 6189 4 1357 5362 181 61 13 chrX 101259188 101259459 -65390837 + L1_Mur2 LINE L1 1768 2047 -3830 4 1357 219 36 0 0 chrX 101259459 101259487 -65390809 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1357 5362 181 61 13 chrX 101259487 101259766 -65390530 + L1_Mur2 LINE L1 2048 2350 -3527 4 1357 4635 44 28 0 chrX 101259766 101260308 -65389988 + L1Md_F3 LINE L1 6027 6583 -1 4 1357 5362 181 61 13 chrX 101260308 101260778 -65389518 + L1_Mur2 LINE L1 2351 2849 -3028 4 1357 180 0 0 0 chrX 101260806 101260826 -65389470 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5 1357 1166 117 0 0 chrX 101260826 101260988 -65389308 - B2_Mm2 SINE B2 -33 162 1 5 1357 533 297 44 19 chrX 101261029 101261187 -65389109 - RSINE1 SINE B4 0 165 4 5 1357 21 57 0 0 chrX 101261352 101261387 -65388909 + AT_rich Low_complexity Low_complexity 1 35 0 5 1357 900 86 0 0 chrX 101261397 101261514 -65388782 + B1_Mus1 SINE Alu 2 118 -30 5 1357 22 0 0 0 chrX 101261795 101261817 -65388479 + AT_rich Low_complexity Low_complexity 1 22 0 5 1357 180 357 50 20 chrX 101261967 101262067 -65388229 + L2a LINE L2 3033 3135 -252 5 1357 533 161 21 31 chrX 101262163 101262259 -65388037 - B3 SINE B2 -121 95 1 5 1357 257 299 32 30 chrX 101262367 101262471 -65387825 + L2a LINE L2 3270 3425 -1 5 1357 231 353 39 10 chrX 101262573 101262676 -65387620 - MIR SINE MIR -1 261 156 5 1357 2409 219 107 119 chrX 101262819 101264168 -65386128 - RMER1A Other Other -6 1024 18 5 1357 2217 228 52 90 chrX 101264492 101265494 -65384802 + RMER13B LTR ERVK 5 900 -8 5 1357 331 317 123 27 chrX 101265695 101265841 -65384455 - MIR3 SINE MIR -47 161 2 5 1357 365 348 45 85 chrX 101266000 101266045 -65384251 + B4 SINE B4 53 220 -71 5 1357 697 213 15 23 chrX 101266045 101266175 -65384121 + B1_Mur2 SINE Alu 15 143 -6 5 1357 303 49 0 0 chrX 101266387 101266428 -65383868 + (TC)n Simple_repeat Simple_repeat 2 42 0 5 1357 306 0 0 0 chrX 101266428 101266461 -65383835 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1357 333 280 91 27 chrX 101266760 101266870 -65383426 + PB1D10 SINE Alu 1 117 0 5 1357 410 233 214 55 chrX 101266874 101267056 -65383240 + B3 SINE B2 2 212 -4 5 1357 3050 203 47 104 chrX 101267338 101268318 -65381978 + L1Md_F2 LINE L1 5648 6571 -11 5 1357 2668 275 133 22 chrX 101268296 101269400 -65380896 + Lx9 LINE L1 6390 7616 -28 5 1357 542 279 62 0 chrX 101269447 101269576 -65380720 + B3 SINE B2 1 137 -79 5 1357 563 258 8 15 chrX 101269920 101270054 -65380242 + B3 SINE B2 84 216 0 5 1357 227 256 99 11 chrX 101270411 101270502 -65379794 + MIRb SINE MIR 86 184 -84 5 1357 287 268 116 61 chrX 101270936 101271083 -65379213 + ORR1E LTR MaLR 56 210 -149 5 1357 640 237 23 0 chrX 101272278 101272409 -65377887 - MER5A1 DNA MER1_type 0 166 33 5 1357 257 254 222 0 chrX 101272498 101272687 -65377609 + Charlie10 DNA MER1_type 2592 2822 0 5 1357 344 208 0 10 chrX 101273705 101273807 -65376489 + CT-rich Low_complexity Low_complexity 3 103 0 5 1357 294 242 212 0 chrX 101273812 101273911 -65376385 - PB1D9 SINE Alu 0 120 1 5 1357 200 209 0 23 chrX 101277068 101277112 -65373184 + (CAA)n Simple_repeat Simple_repeat 2 44 0 5 1357 431 162 0 0 chrX 101277114 101277188 -65373108 - MIRc SINE MIR 0 268 195 5 1357 5030 67 6 3 chrX 101284782 101285474 -65364822 + L1Md_F2 LINE L1 4893 5586 -297 5 1357 7742 54 9 15 chrX 101285474 101286474 -65363822 + L1Md_F2 LINE L1 5587 6580 -2 5 1357 337 239 110 33 chrX 101286627 101286718 -65363578 + PB1D10 SINE Alu 20 117 0 5 1357 209 330 39 20 chrX 101287578 101287680 -65362616 - MIR3 SINE MIR -32 176 73 5 1357 387 0 0 0 chrX 101287983 101288026 -65362270 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1357 234 0 0 0 chrX 101288026 101288051 -65362245 + (GA)n Simple_repeat Simple_repeat 2 27 0 5 1357 224 30 30 0 chrX 101288072 101288105 -65362191 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1357 225 0 0 0 chrX 101288105 101288129 -65362167 + (GA)n Simple_repeat Simple_repeat 2 26 0 5 1357 349 266 215 7 chrX 101288660 101288804 -65361492 - MER3 DNA MER1_type -12 197 24 5 1357 263 318 107 45 chrX 101289098 101289210 -65361086 - PB1D7 SINE Alu 0 120 2 5 1357 198 0 0 0 chrX 101289401 101289423 -65360873 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 1357 601 244 39 0 chrX 101290244 101290371 -65359925 + B1_Mur1 SINE Alu 4 135 -14 5 1357 189 0 0 0 chrX 101290371 101290392 -65359904 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 5 1357 1428 71 5 5 chrX 101291233 101291418 -65358878 + B2_Mm2 SINE B2 2 186 -9 5 1357 311 113 0 19 chrX 101292405 101292416 -65357880 + (GGGAGA)n Simple_repeat Simple_repeat 2 12 0 5 1357 1204 89 0 11 chrX 101292416 101292598 -65357698 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 1357 311 113 0 19 chrX 101292598 101292640 -65357656 + (GGGAGA)n Simple_repeat Simple_repeat 1 42 0 5 1357 210 316 0 92 chrX 101292683 101292770 -65357526 - RSINE1 SINE B4 0 165 87 5 1357 297 250 122 61 chrX 101292762 101292877 -65357419 - B4 SINE B4 -63 229 108 5 1357 243 324 17 51 chrX 101293684 101293801 -65356495 - MamSINE1 SINE tRNA -2 288 176 5 1357 297 381 40 25 chrX 101293857 101294056 -65356240 - MIRb SINE MIR -41 227 26 5 1357 186 103 0 0 chrX 101294209 101294238 -65356058 + (TCTCCC)n Simple_repeat Simple_repeat 3 31 0 5 1357 1531 38 27 0 chrX 101294501 101294685 -65355611 + B2_Mm1t SINE B2 1 189 -4 5 1357 1307 103 5 0 chrX 101294694 101294879 -65355417 + B2_Mm1t SINE B2 2 187 -6 5 1357 198 342 86 17 chrX 101295219 101295335 -65354961 - MIRc SINE MIR -31 237 114 5 1357 372 59 0 0 chrX 101295764 101295815 -65354481 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1357 459 0 0 0 chrX 101295815 101295865 -65354431 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 1357 333 313 67 60 chrX 101298006 101298193 -65352103 - MIRb SINE MIR -2 260 80 5 1357 366 291 71 0 chrX 101299504 101299631 -65350665 + RMER15 LTR ERVL 422 557 -18 5 1357 223 366 99 40 chrX 101300138 101300340 -65349956 - MIRc SINE MIR -1 267 54 5 1357 2476 256 148 7 chrX 101300340 101301320 -65348976 + Lx6 LINE L1 6112 7433 -27 5 1357 237 286 0 0 chrX 101301586 101301635 -65348661 - PB1D10 SINE Alu -50 67 19 5 1357 222 143 68 51 chrX 101301696 101301755 -65348541 - B2_Mm2 SINE B2 -135 60 1 5 1357 648 277 97 0 chrX 101301946 101302141 -65348155 - ID_B1 SINE B4 0 224 11 5 1357 24 85 0 0 chrX 101302263 101302322 -65347974 + AT_rich Low_complexity Low_complexity 1 59 0 5 1357 414 0 0 0 chrX 101302397 101302443 -65347853 + (TTTA)n Simple_repeat Simple_repeat 4 49 0 5 1357 1134 85 0 0 chrX 101302444 101302597 -65347699 - B2_Mm2 SINE B2 -41 154 2 5 1357 200 180 20 20 chrX 101302688 101302739 -65347557 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 1357 3087 50 0 8 chrX 101303503 101303886 -65346410 - L1Md_F2 LINE L1 -12 6570 6191 5 1357 2570 67 5 65 chrX 101304439 101304628 -65345668 + L1_Mur1 LINE L1 4814 5004 -882 5 1357 1126 76 7 0 chrX 101304628 101304773 -65345523 + B1_Mm SINE Alu 2 147 0 5 1357 2570 67 5 65 chrX 101304773 101304981 -65345315 + L1_Mur1 LINE L1 5005 5187 -699 5 1357 1969 135 37 47 chrX 101304976 101305356 -65344940 + Lx5 LINE L1 5723 6098 -952 5 1357 1046 215 26 30 chrX 101305357 101305621 -65344675 - Lx9 LINE L1 -232 7412 7150 5 1357 1487 249 89 21 chrX 101305750 101306438 -65343858 - Lx9 LINE L1 -1679 5965 5232 5 1357 365 303 63 10 chrX 101306693 101306906 -65343390 + L1MC4a LINE L1 5593 5817 -1968 5 1357 479 85 49 0 chrX 101306987 101307069 -65343227 - L1_Mus2 LINE L1 -1 6565 6480 5 1357 1260 93 16 11 chrX 101307079 101307263 -65343033 - B2_Mm2 SINE B2 -10 185 1 5 1357 1068 297 142 14 chrX 101307327 101308307 -65341989 + L1MC4a LINE L1 5869 6985 -897 5 1357 21 0 0 0 chrX 101308396 101308417 -65341879 + AT_rich Low_complexity Low_complexity 1 21 0 5 1357 797 170 0 112 chrX 101308430 101308582 -65341714 + B1_Mur2 SINE Alu 12 146 -3 5 1357 23 68 0 0 chrX 101309045 101309089 -65341207 + AT_rich Low_complexity Low_complexity 1 44 0 5 1357 228 287 82 18 chrX 101309215 101309325 -65340971 + MIR3 SINE MIR 85 201 -7 5 1357 3187 41 15 5 chrX 101309530 101309922 -65340374 - MTA_Mm LTR MaLR 0 396 1 5 1357 1039 104 13 0 chrX 101309982 101310129 -65340167 + B2_Mm2 SINE B2 1 149 -46 5 1357 5208 158 41 36 chrX 101310129 101311080 -65339216 + RLTR13D3 LTR ERVK 1 956 -158 5 1357 488 301 113 59 chrX 101311079 101311301 -65338995 + B4A SINE B4 35 268 -24 5 1357 414 0 0 0 chrX 101311306 101311352 -65338944 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1357 256 47 0 0 chrX 101311620 101311663 -65338633 - Lx LINE L1 -7 6647 6605 5 1357 369 162 0 0 chrX 101311929 101311997 -65338299 + GA-rich Low_complexity Low_complexity 2 69 0 5 1357 846 165 51 67 chrX 101312199 101312215 -65338081 - B2_Mm1t SINE B2 0 193 180 5 1357 1242 34 0 0 chrX 101312215 101312362 -65337934 - B1_Mus1 SINE Alu 0 148 2 5 1357 846 165 51 67 chrX 101312362 101312409 -65337887 - B2_Mm1t SINE B2 -14 179 133 5 1357 279 0 0 0 chrX 101312409 101312440 -65337856 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 5 1357 981 85 0 0 chrX 101312440 101312570 -65337726 - B2_Mm2 SINE B2 -64 131 2 5 1357 1278 219 164 6 chrX 101312684 101312996 -65337300 + MTD LTR MaLR 28 388 -31 5 1357 25 65 0 0 chrX 101313014 101313060 -65337236 + AT_rich Low_complexity Low_complexity 1 46 0 5 1357 209 341 0 0 chrX 101313128 101313210 -65337086 + A-rich Low_complexity Low_complexity 1 82 0 5 1357 481 204 29 48 chrX 101313642 101313745 -65336551 - B3A SINE B2 -93 105 5 5 1357 665 205 0 0 chrX 101313782 101313894 -65336402 - PB1D9 SINE Alu -6 114 3 5 1357 2174 72 48 13 chrX 101313903 101314212 -65336084 + Lx3A LINE L1 6650 6969 -12 5 1357 272 125 0 0 chrX 101314239 101314287 -65336009 - Lx8 LINE L1 -5 7468 7421 5 1357 216 0 0 0 chrX 101314313 101314337 -65335959 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 5 1357 393 204 27 18 chrX 101314346 101314456 -65335840 - Lx8 LINE L1 -5 7468 7358 5 1357 902 250 91 16 chrX 101314592 101315121 -65335175 - L1MC2 LINE L1 -300 6044 5457 5 1357 376 280 127 28 chrX 101315127 101315341 -65334955 - MLT1A0 LTR MaLR -5 403 130 6 1357 27 0 0 0 chrX 101315347 101315374 -65334922 + AT_rich Low_complexity Low_complexity 1 27 0 6 1357 3943 139 128 98 chrX 101315420 101316304 -65333992 + RMER21A LTR ERV1 1 910 -37 6 1357 384 278 80 68 chrX 101316290 101316323 -65333973 + B4A SINE B4 57 91 -201 6 1357 738 135 98 0 chrX 101316323 101316456 -65333840 + B1_Mur4 SINE Alu 4 149 -1 6 1357 207 0 0 0 chrX 101316467 101316490 -65333806 + (TC)n Simple_repeat Simple_repeat 2 24 0 6 1357 405 0 0 0 chrX 101316490 101316534 -65333762 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 1357 2394 260 93 14 chrX 101316702 101317434 -65332862 - Lx8 LINE L1 -250 7223 6434 5 1357 540 132 0 0 chrX 101317601 101317684 -65332612 - RMER19C LTR ERVK 0 611 529 6 1357 512 275 32 16 chrX 101317728 101317913 -65332383 - L1MB2 LINE L1 -256 5915 5728 6 1357 185 205 26 0 chrX 101318202 101318241 -65332055 - L3 LINE CR1 -1192 3297 3258 6 1358 355 306 37 7 chrX 101319022 101319157 -65331139 - B1F2 SINE Alu -6 143 5 6 1358 228 279 15 0 chrX 101319182 101319250 -65331046 + (TA)n Simple_repeat Simple_repeat 1 69 0 6 1358 200 176 0 38 chrX 101319232 101319285 -65331011 + T-rich Low_complexity Low_complexity 2 52 0 6 1358 537 308 48 46 chrX 101319386 101320116 -65330180 + L1_Rod LINE L1 2899 3614 -2529 6 1358 463 276 7 63 chrX 101320126 101320269 -65330027 + B1F SINE Alu 12 146 -3 6 1358 22 56 0 0 chrX 101320556 101320592 -65329704 + AT_rich Low_complexity Low_complexity 1 36 0 6 1358 21 36 0 0 chrX 101320769 101320797 -65329499 + AT_rich Low_complexity Low_complexity 1 28 0 6 1358 390 129 0 0 chrX 101321462 101321524 -65328772 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 1358 211 259 56 0 chrX 101321524 101321578 -65328718 - RSINE1 SINE B4 -35 130 74 6 1358 493 250 68 17 chrX 101321590 101321708 -65328588 + B4A SINE B4 146 269 -23 6 1358 225 0 0 0 chrX 101321708 101321733 -65328563 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1358 310 312 57 47 chrX 101321743 101322039 -65328257 + L1M4c LINE L1 990 1288 -5096 6 1358 243 275 36 36 chrX 101322057 101322140 -65328156 + L1M4c LINE L1 1702 1784 -4519 6 1358 396 59 0 0 chrX 101322339 101322390 -65327906 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 1358 594 126 17 0 chrX 101322394 101322513 -65327783 + Lx9 LINE L1 7517 7637 -7 6 1358 5516 83 14 11 chrX 101322526 101323332 -65326964 + Lx3A LINE L1 6130 6937 -44 6 1358 807 293 61 40 chrX 101323335 101323839 -65326457 + L1_Rod LINE L1 5040 5544 -336 6 1358 1510 44 0 0 chrX 101323913 101324096 -65326200 - L1_Mus1 LINE L1 0 6567 6385 6 1358 4952 60 16 19 chrX 101324414 101325060 -65325236 + L1Md_F2 LINE L1 5927 6570 -12 6 1358 1779 92 21 21 chrX 101325574 101325862 -65324434 - L1_Mm LINE L1 -375 5508 5221 6 1358 736 258 67 6 chrX 101325867 101326046 -65324250 - ID_B1 SINE B4 0 224 35 6 1358 984 153 41 6 chrX 101326047 101326218 -65324078 - ORR1C2 LTR MaLR -3 381 205 6 1358 389 235 12 0 chrX 101326252 101326337 -65323959 - ORR1C2 LTR MaLR -257 117 32 6 1358 430 204 0 37 chrX 101326353 101326460 -65323836 - Lx4B LINE L1 -4 7054 6952 6 1358 5478 187 105 18 chrX 101326493 101327753 -65322543 - ORR1C2-int LTR MaLR 0 1370 1 6 1358 27 29 0 0 chrX 101327763 101327797 -65322499 + AT_rich Low_complexity Low_complexity 1 34 0 6 1358 31872 86 40 14 chrX 101327797 101333754 -65316542 - L1Md_F2 LINE L1 -16 6569 240 6 1358 1543 199 43 80 chrX 101333754 101333810 -65316486 - ORR1C2 LTR MaLR 0 384 329 6 1358 1440 70 16 0 chrX 101333810 101333995 -65316301 - B2_Mm2 SINE B2 -7 188 1 6 1358 1543 199 43 80 chrX 101333995 101334337 -65315959 - ORR1C2 LTR MaLR -56 328 1 6 1358 345 286 85 6 chrX 101334379 101334544 -65315752 + L1M3 LINE L1 2983 3160 -2983 6 1358 653 304 22 22 chrX 101334563 101334795 -65315501 + Lx6 LINE L1 7202 7433 -27 6 1358 1877 288 77 57 chrX 101334781 101335946 -65314350 + L1M3 LINE L1 3134 4322 -1818 6 1358 264 221 112 26 chrX 101336008 101336124 -65314172 + L1_Mur3 LINE L1 4282 4407 -1473 6 1358 1231 264 86 15 chrX 101336445 101336783 -65313513 + MTEa LTR MaLR 3 364 -15 6 1358 21 57 0 0 chrX 101337162 101337197 -65313099 + AT_rich Low_complexity Low_complexity 1 35 0 6 1358 4084 144 36 20 chrX 101337242 101337957 -65312339 - Lx2B LINE L1 0 7000 6274 6 1358 1318 74 23 0 chrX 101338013 101338188 -65312108 + B2_Mm2 SINE B2 3 181 -14 6 1358 183 162 0 0 chrX 101338344 101338381 -65311915 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 6 1358 450 278 55 9 chrX 101338381 101338490 -65311806 - PB1D7 SINE Alu -1 119 6 6 1358 181 369 31 0 chrX 101338587 101338652 -65311644 + MIRc SINE MIR 7 73 -195 6 1358 24 0 0 0 chrX 101338734 101338758 -65311538 + AT_rich Low_complexity Low_complexity 1 24 0 6 1358 1155 56 0 0 chrX 101338807 101338949 -65311347 + B1_Mus1 SINE Alu 2 143 -5 6 1358 207 0 0 0 chrX 101338954 101338977 -65311319 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1358 213 351 107 71 chrX 101339018 101339242 -65311054 - MIRb SINE MIR -11 257 26 6 1358 1317 68 20 35 chrX 101339687 101339884 -65310412 + B2_Mm2 SINE B2 2 195 0 6 1358 300 222 97 0 chrX 101339884 101339956 -65310340 + ID_B1 SINE B4 144 222 -2 6 1358 270 0 0 0 chrX 101340635 101340665 -65309631 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1358 876 169 34 0 chrX 101340826 101340974 -65309322 + B2_Mm2 SINE B2 3 155 -40 6 1358 233 322 103 0 chrX 101341214 101341301 -65308995 - MIRc SINE MIR -143 125 30 6 1358 1209 54 22 5 chrX 101341781 101341966 -65308330 - Lx3_Mus LINE L1 0 7009 6822 6 1358 342 0 0 0 chrX 101342145 101342183 -65308113 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1358 408 196 106 9 chrX 101342241 101342354 -65307942 - Lx4B LINE L1 -4 7054 6931 6 1358 330 204 20 57 chrX 101342455 101342547 -65307749 + L2a LINE L2 3250 3372 -54 6 1358 248 277 70 18 chrX 101342870 101342984 -65307312 - MIRb SINE MIR -41 227 108 6 1358 359 261 10 17 chrX 101343517 101343633 -65306663 - L1_Mur3 LINE L1 -1327 4816 4671 6 1358 981 226 0 26 chrX 101343718 101343913 -65306383 + B3 SINE B2 4 193 -23 6 1358 23 78 0 0 chrX 101344547 101344598 -65305698 + AT_rich Low_complexity Low_complexity 1 51 0 6 1358 836 258 158 47 chrX 101344826 101345123 -65305173 - ORR1D1 LTR MaLR -25 359 30 6 1358 5320 200 87 49 chrX 101345131 101345328 -65304968 - ORR1D1-int LTR MaLR -3 1367 1156 6 1358 369 0 0 0 chrX 101345328 101345369 -65304927 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1358 5320 200 87 49 chrX 101345369 101346489 -65303807 - ORR1D1-int LTR MaLR -215 1155 3 6 1358 1278 221 96 42 chrX 101346489 101346844 -65303452 - ORR1D1 LTR MaLR 0 374 1 6 1358 284 268 159 23 chrX 101348461 101348549 -65301747 - PB1D10 SINE Alu -10 107 8 6 1358 509 268 87 0 chrX 101350382 101350509 -65299787 - B1_Mur2 SINE Alu -7 142 5 6 1358 8664 19 0 0 chrX 101351164 101352314 -65297982 - L1Md_A LINE L1 0 6582 5433 6 1358 1089 80 0 0 chrX 101352615 101352752 -65297544 + B1_Mm SINE Alu 3 139 -8 6 1358 378 0 0 0 chrX 101352756 101352798 -65297498 + (TAA)n Simple_repeat Simple_repeat 2 43 0 6 1358 22 35 0 0 chrX 101353003 101353032 -65297264 + AT_rich Low_complexity Low_complexity 1 29 0 6 1358 406 283 35 9 chrX 101353079 101353193 -65297103 + MLT1H-int LTR MaLR 1 117 -1292 6 1358 329 349 92 57 chrX 101353199 101353424 -65296872 - MLT1H-int LTR MaLR -141 1268 1027 6 1358 1203 61 0 0 chrX 101353545 101353692 -65296604 + B1_Mm SINE Alu 1 147 0 6 1358 201 121 0 0 chrX 101353692 101353725 -65296571 + (A)n Simple_repeat Simple_repeat 1 33 0 6 1358 367 344 20 7 chrX 101353829 101353981 -65296315 + MARNA DNA Mariner 385 538 -48 6 1358 304 77 39 0 chrX 101354003 101354055 -65296241 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 1358 576 295 66 50 chrX 101354080 101354410 -65295886 + Lx8 LINE L1 6216 6530 -1166 6 1358 399 21 0 0 chrX 101354557 101354605 -65295691 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1358 485 298 24 16 chrX 101355009 101355132 -65295164 + RSINE1 SINE B4 1 124 -41 6 1358 302 282 152 8 chrX 101355353 101355478 -65294818 - MLT1C LTR MaLR -9 458 316 6 1358 437 0 0 19 chrX 101355490 101355544 -65294752 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1358 440 268 110 27 chrX 101355637 101355783 -65294513 + MLT1A0 LTR MaLR 204 361 -4 6 1358 270 177 226 0 chrX 101356066 101356128 -65294168 + Charlie2b DNA MER1_type 72 147 -2635 6 1358 3484 229 135 46 chrX 101356183 101357290 -65293006 - MTC-int LTR MaLR -53 1205 1 6 1358 1656 168 101 12 chrX 101357294 101357632 -65292664 - MTD LTR MaLR -39 380 13 6 1358 306 0 0 0 chrX 101358173 101358207 -65292089 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1358 802 191 71 0 chrX 101359051 101359192 -65291104 - Lx6 LINE L1 -340 7120 6970 6 1358 1201 103 67 19 chrX 101359193 101359401 -65290895 + ORR1B1 LTR MaLR 2 219 -175 6 1358 866 204 14 95 chrX 101359388 101359599 -65290697 - ORR1D1 LTR MaLR -180 194 1 6 1358 1207 41 7 0 chrX 101360027 101360172 -65290124 + B1_Mm SINE Alu 1 146 -1 6 1358 1568 37 0 5 chrX 101360195 101360385 -65289911 + B2_Mm1t SINE B2 2 190 -3 6 1358 1808 199 71 8 chrX 101360537 101360916 -65289380 + MTD LTR MaLR 3 405 -14 6 1358 500 262 113 24 chrX 101361204 101361372 -65288924 - MER20 DNA MER1_type -30 189 7 6 1358 636 68 9 28 chrX 101362328 101362434 -65287862 + L1_Mus2 LINE L1 6463 6566 0 6 1358 34007 35 12 11 chrX 101362659 101367750 -65282546 + L1Md_Gf LINE L1 1 4951 -935 6 1358 225 183 46 77 chrX 101367750 101367815 -65282481 - RMER20A LTR ERVK -268 248 186 6 1358 34007 35 12 11 chrX 101367815 101368469 -65281827 + L1Md_Gf LINE L1 4952 5589 -297 6 1358 8965 5 0 0 chrX 101368469 101369465 -65280831 + L1Md_T LINE L1 5587 6582 0 6 1358 1155 68 0 0 chrX 101369776 101369923 -65280373 + B1_Mus2 SINE Alu 1 147 0 6 1358 25 0 0 0 chrX 101369923 101369948 -65280348 + AT_rich Low_complexity Low_complexity 1 25 0 6 1358 1193 91 137 34 chrX 101370103 101370307 -65279989 + URR1A DNA MER1_type 1 225 -1 6 1358 180 0 0 0 chrX 101370581 101370601 -65279695 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 6 1358 1094 74 0 0 chrX 101370602 101370737 -65279559 - B1_Mus1 SINE Alu -13 135 1 7 1358 180 0 0 0 chrX 101371317 101371337 -65278959 + (CTG)n Simple_repeat Simple_repeat 2 21 0 7 1358 230 283 0 0 chrX 101371445 101371498 -65278798 + GA-rich Low_complexity Low_complexity 88 140 0 7 1358 525 16 0 0 chrX 101371641 101371703 -65278593 + (GA)n Simple_repeat Simple_repeat 2 63 0 7 1358 938 71 0 0 chrX 101373329 101373455 -65276841 + B1_Mus1 SINE Alu 2 127 -21 7 1358 24 32 0 0 chrX 101373587 101373618 -65276678 + AT_rich Low_complexity Low_complexity 1 31 0 7 1358 550 107 60 0 chrX 101375564 101375648 -65274648 + ORR1D2 LTR MaLR 244 332 -38 7 1358 652 231 83 0 chrX 101375662 101375878 -65274418 - L1M2 LINE L1 -713 5587 5344 7 1358 1262 261 65 0 chrX 101375879 101376155 -65274141 + Lx5 LINE L1 6750 7043 -7 7 1358 263 189 109 22 chrX 101376174 101376266 -65274030 - L1_Mm LINE L1 -571 5312 5213 7 1358 1471 223 80 9 chrX 101376269 101376608 -65273688 - MTD LTR MaLR 0 419 57 7 1358 294 224 46 23 chrX 101376642 101376729 -65273567 - L1_Rod LINE L1 -669 5178 5090 7 1358 746 300 65 0 chrX 101376698 101376975 -65273321 - L1M2 LINE L1 -1023 5120 4826 7 1358 35 0 0 0 chrX 101377093 101377128 -65273168 + AT_rich Low_complexity Low_complexity 1 35 0 7 1358 601 261 97 0 chrX 101377473 101377607 -65272689 + RSINE1 SINE B4 3 149 -16 7 1358 522 0 0 0 chrX 101377616 101377674 -65272622 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 7 1358 765 253 5 58 chrX 101377757 101377946 -65272350 - B3A SINE B2 0 198 20 7 1358 418 370 44 55 chrX 101378195 101378378 -65271918 + B4A SINE B4 110 290 -2 7 1358 3485 208 87 26 chrX 101378973 101379840 -65270456 - Lx9 LINE L1 -8 7636 6718 7 1358 1891 168 15 23 chrX 101379842 101380186 -65270110 + Lx8 LINE L1 5501 5874 -1599 7 1358 1472 38 49 0 chrX 101380186 101380345 -65269951 + B2_Mm1a SINE B2 2 160 -33 7 1358 438 20 0 0 chrX 101380345 101380396 -65269900 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 7 1358 1472 38 49 0 chrX 101380396 101380419 -65269877 + B2_Mm1a SINE B2 161 191 -2 7 1358 1891 289 61 72 chrX 101380419 101381064 -65269232 + Lx8 LINE L1 5875 6510 -963 7 1358 717 296 18 6 chrX 101381135 101381305 -65268991 + B3 SINE B2 27 198 -18 7 1358 23 0 0 0 chrX 101381410 101381433 -65268863 + AT_rich Low_complexity Low_complexity 1 23 0 7 1358 22 0 0 0 chrX 101381637 101381659 -65268637 + AT_rich Low_complexity Low_complexity 1 22 0 7 1358 25 65 0 0 chrX 101381781 101381827 -65268469 + AT_rich Low_complexity Low_complexity 1 46 0 7 1358 1219 47 0 0 chrX 101382508 101382656 -65267640 + B1_Mus1 SINE Alu 1 148 0 7 1358 244 290 174 0 chrX 101382824 101382893 -65267403 - ID2 SINE ID 0 83 3 7 1358 232 328 57 57 chrX 101383873 101383996 -65266300 + MIRm SINE MIR 31 153 -123 7 1358 23 54 0 0 chrX 101384097 101384134 -65266162 + AT_rich Low_complexity Low_complexity 1 37 0 7 1358 433 293 16 24 chrX 101384148 101384274 -65266022 + B1F SINE Alu 25 149 0 7 1358 23 33 0 0 chrX 101384371 101384401 -65265895 + AT_rich Low_complexity Low_complexity 1 30 0 7 1358 1537 280 128 50 chrX 101384401 101385391 -65264905 + L1MD2 LINE L1 1165 2231 -4402 7 1358 579 261 22 0 chrX 101385490 101385628 -65264668 - B1F SINE Alu -7 142 2 7 1358 1083 311 52 25 chrX 101385666 101385918 -65264378 + L1MD2 LINE L1 5987 6245 -505 7 1358 778 167 20 40 chrX 101385918 101386050 -65264246 + B1_Mur1 SINE Alu 3 136 -13 7 1358 192 77 0 0 chrX 101386050 101386076 -65264220 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7 1358 778 167 20 40 chrX 101386076 101386093 -65264203 + B1_Mur1 SINE Alu 137 149 0 7 1358 1083 311 52 25 chrX 101386093 101386364 -65263932 + L1MD2 LINE L1 6246 6524 -226 7 1358 283 253 45 22 chrX 101386384 101386473 -65263823 + L1MD2 LINE L1 6598 6688 -62 7 1358 990 306 40 97 chrX 101386510 101387006 -65263290 + MLT1D LTR MaLR 26 493 -12 7 1358 810 264 75 0 chrX 101387071 101387283 -65263013 + B4A SINE B4 1 228 -64 7 1358 1152 50 0 0 chrX 101387716 101387857 -65262439 + B1_Mus2 SINE Alu 1 141 -6 7 1358 284 235 97 48 chrX 101388046 101388149 -65262147 + L2a LINE L2 3311 3418 -8 7 1358 24 67 0 0 chrX 101388608 101388653 -65261643 + AT_rich Low_complexity Low_complexity 1 45 0 7 1358 285 136 0 0 chrX 101388696 101388755 -65261541 - Lx9 LINE L1 0 7644 7586 7 1358 188 175 0 34 chrX 101389106 101389165 -65261131 + T-rich Low_complexity Low_complexity 4 60 0 7 1358 2218 55 14 0 chrX 101389173 101389462 -65260834 - Lx3_Mus LINE L1 0 7009 6717 7 1358 820 140 41 14 chrX 101389471 101389616 -65260680 - B1_Mur4 SINE Alu -1 149 1 7 1358 719 239 4 164 chrX 101390482 101390732 -65259564 - B3 SINE B2 -5 211 2 7 1358 181 211 55 55 chrX 101390933 101390988 -65259308 - MIRm SINE MIR -65 211 157 7 1358 673 298 60 0 chrX 101391176 101391344 -65258952 - ID_B1 SINE B4 -3 221 44 7 1358 409 234 55 18 chrX 101391360 101391469 -65258827 - B1F SINE Alu -13 136 24 7 1358 397 304 47 52 chrX 101391372 101391563 -65258733 - MT2B2 LTR ERVL -311 273 84 7 1358 458 235 8 50 chrX 101391793 101391914 -65258382 + PB1D10 SINE Alu 2 117 0 7 1358 321 247 0 0 chrX 101391929 101392002 -65258294 + ID4 SINE ID 3 75 -8 7 1358 425 19 0 18 chrX 101393022 101393077 -65257219 + (GAAAA)n Simple_repeat Simple_repeat 2 55 0 7 1358 309 51 0 0 chrX 101395624 101395663 -65254633 + (CGG)n Simple_repeat Simple_repeat 1 39 0 7 1358 360 119 0 0 chrX 101395743 101395802 -65254494 + (CA)n Simple_repeat Simple_repeat 1 59 0 7 1358 289 275 0 12 chrX 101396056 101396137 -65254159 + (CCG)n Simple_repeat Simple_repeat 3 82 0 7 1358 276 330 0 9 chrX 101396411 101396524 -65253772 + (CTG)n Simple_repeat Simple_repeat 1 112 0 7 1358 362 115 16 0 chrX 101396558 101396619 -65253677 + (TCC)n Simple_repeat Simple_repeat 1 62 0 7 1358 201 233 0 0 chrX 101396973 101397016 -65253280 + C-rich Low_complexity Low_complexity 6 48 0 7 1358 257 220 203 0 chrX 101397906 101397965 -65252331 + MTEa LTR MaLR 35 105 -274 7 1358 338 298 72 9 chrX 101398055 101398185 -65252111 - MIRb SINE MIR -3 259 120 7 1358 25 0 0 0 chrX 101398279 101398304 -65251992 + AT_rich Low_complexity Low_complexity 1 25 0 7 1358 263 359 31 31 chrX 101398459 101398620 -65251676 + RSINE1 SINE B4 5 165 0 7 1358 392 289 10 10 chrX 101398674 101398772 -65251524 - MER90a LTR ERV1 0 575 478 7 1358 1165 229 55 95 chrX 101398777 101399077 -65251219 + MLT1B LTR MaLR 3 295 -95 7 1358 3511 90 18 18 chrX 101399077 101399576 -65250720 - Lx LINE L1 -5 6649 6151 7 1358 1165 229 55 95 chrX 101399576 101399676 -65250620 + MLT1B LTR MaLR 296 386 -4 7 1358 714 309 185 32 chrX 101399679 101400084 -65250212 - MER90a LTR ERV1 -93 521 55 7 1358 1242 41 0 0 chrX 101400184 101400331 -65249965 + B1_Mm SINE Alu 1 147 0 7 1358 259 279 33 0 chrX 101400351 101400412 -65249884 + ID4_ SINE ID 8 70 -13 7 1358 314 325 69 17 chrX 101400517 101400633 -65249663 + MIR SINE MIR 69 190 -72 7 1358 29 0 0 0 chrX 101400686 101400715 -65249581 + AT_rich Low_complexity Low_complexity 1 29 0 7 1358 206 269 0 0 chrX 101400728 101400784 -65249512 + MIR SINE MIR 206 265 -3 7 1358 257 268 48 58 chrX 101400784 101400887 -65249409 + L2c LINE L2 3207 3308 -79 7 1358 1160 269 37 50 chrX 101400922 101401302 -65248994 + MTEa LTR MaLR 3 377 -2 7 1358 1381 148 0 5 chrX 101403759 101403983 -65246313 - URR1B DNA MER1_type 0 225 3 7 1358 906 301 40 70 chrX 101404902 101405124 -65245172 + B4A SINE B4 1 221 -71 7 1358 882 231 15 20 chrX 101405124 101405323 -65244973 + B3A SINE B2 1 198 0 7 1358 906 301 40 70 chrX 101405323 101405400 -65244896 + B4A SINE B4 222 291 -1 7 1358 243 0 0 0 chrX 101405411 101405438 -65244858 + (CA)n Simple_repeat Simple_repeat 1 27 0 7 1358 362 331 45 28 chrX 101406234 101406411 -65243885 + L2c LINE L2 2978 3157 -230 7 1358 394 253 107 41 chrX 101406418 101406587 -65243709 - MLT1C LTR MaLR -8 459 280 7 1358 302 319 49 25 chrX 101406714 101406836 -65243460 - MLT1C LTR MaLR -379 126 2 7 1358 324 0 0 0 chrX 101407326 101407362 -65242934 + (TA)n Simple_repeat Simple_repeat 2 37 0 7 1358 3238 58 0 0 chrX 101407884 101408334 -65241962 - L1_Mm LINE L1 -3539 2344 1895 7 1358 2923 17 0 0 chrX 101408333 101408680 -65241616 + L1_Mm LINE L1 5240 5586 -297 7 1358 8547 28 0 0 chrX 101408680 101409674 -65240622 + L1Md_T LINE L1 5587 6580 -2 7 1358 984 56 0 0 chrX 101409696 101409821 -65240475 + B1_Mus1 SINE Alu 24 148 0 7 1358 1420 47 0 21 chrX 101409823 101410063 -65240233 + (GAAA)n Simple_repeat Simple_repeat 1 235 0 7 1358 339 266 32 97 chrX 101410397 101410551 -65239745 - MIR SINE MIR -57 205 62 7 1358 346 364 43 0 chrX 101410597 101410737 -65239559 + L2a LINE L2 3021 3166 -221 7 1358 455 299 158 32 chrX 101411619 101411809 -65238487 + MIRb SINE MIR 7 220 -48 7 1358 186 256 55 143 chrX 101412001 101412092 -65238204 + MIRm SINE MIR 39 121 -155 7 1358 384 268 139 50 chrX 101412102 101412294 -65238002 + MIRb SINE MIR 62 267 -1 7 1358 266 265 0 0 chrX 101412308 101412357 -65237939 - ID_B1 SINE B4 -93 131 83 7 1358 479 301 77 38 chrX 101413090 101413325 -65236971 + L2a LINE L2 3182 3425 -1 7 1358 202 286 242 34 chrX 101413370 101413598 -65236698 + L2c LINE L2 3073 3383 -43 7 1358 186 43 0 0 chrX 101413947 101413970 -65236326 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1358 1311 81 6 0 chrX 101413970 101414143 -65236153 - B2_Mm1t SINE B2 -18 175 2 7 1358 1801 28 0 0 chrX 101414379 101414594 -65235702 + L1Md_A LINE L1 6368 6582 0 7 1358 458 310 18 9 chrX 101414634 101414748 -65235548 + RSINE1 SINE B4 9 123 -42 7 1358 301 262 78 0 chrX 101414757 101414898 -65235398 - L1MB8 LINE L1 -195 5983 5832 7 1358 6568 257 43 100 chrX 101414895 101417587 -65232709 - Lx7 LINE L1 -340 7356 4642 7 1358 558 0 0 0 chrX 101417587 101417649 -65232647 + (TC)n Simple_repeat Simple_repeat 1 62 0 7 1358 213 108 0 0 chrX 101417655 101417692 -65232604 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 7 1358 6568 247 50 172 chrX 101417692 101418369 -65231927 - Lx7 LINE L1 -1242 4635 4090 7 1358 1204 133 0 0 chrX 101418369 101418550 -65231746 - URR1A DNA MER1_type -5 221 41 7 1358 1219 54 0 0 chrX 101418550 101418697 -65231599 + B1_Mus2 SINE Alu 1 147 0 7 1358 6568 247 50 172 chrX 101418697 101418749 -65231547 - Lx7 LINE L1 -1788 4089 4044 7 1358 264 191 0 21 chrX 101418749 101418797 -65231499 - URR1B DNA MER1_type -178 47 1 8 1358 6568 247 50 172 chrX 101418797 101420288 -65230008 - Lx7 LINE L1 -1788 4043 2725 7 1358 1169 68 0 0 chrX 101420288 101420435 -65229861 + B1_Mm SINE Alu 1 147 0 8 1358 6568 247 50 172 chrX 101420435 101421059 -65229237 - Lx7 LINE L1 -3153 2724 2170 7 1358 721 80 304 0 chrX 101421059 101421171 -65229125 - B1_Mm SINE Alu 0 147 2 8 1358 6568 247 50 172 chrX 101421171 101421607 -65228689 - Lx7 LINE L1 -3708 2169 1705 7 1358 984 274 38 38 chrX 101421596 101422116 -65228180 - Lx7 LINE L1 -4490 1390 858 7 1358 26 50 0 0 chrX 101423141 101423181 -65227115 + AT_rich Low_complexity Low_complexity 1 40 0 8 1358 1144 89 0 0 chrX 101423334 101423480 -65226816 + B1_Mus2 SINE Alu 1 146 -1 8 1358 395 52 0 17 chrX 101423486 101423545 -65226751 + (CAAAC)n Simple_repeat Simple_repeat 2 59 0 8 1358 1217 260 85 6 chrX 101423676 101424017 -65226279 - ORR1D2 LTR MaLR -2 368 1 8 1358 295 279 94 19 chrX 101424027 101424133 -65226163 - PB1D10 SINE Alu -3 114 1 8 1358 22 35 0 0 chrX 101424241 101424270 -65226026 + AT_rich Low_complexity Low_complexity 1 29 0 8 1358 245 323 10 59 chrX 101424754 101424856 -65225440 + L3 LINE CR1 4392 4488 -1 8 1358 21 36 0 0 chrX 101424880 101424908 -65225388 + AT_rich Low_complexity Low_complexity 1 28 0 8 1358 663 246 0 21 chrX 101425160 101425301 -65224995 + B1F1 SINE Alu 11 148 -1 8 1358 440 264 122 15 chrX 101425302 101425433 -65224863 + B1F SINE Alu 2 146 -3 8 1358 905 218 139 4 chrX 101425438 101425668 -65224628 + B4A SINE B4 5 265 -27 8 1358 356 250 0 0 chrX 101425666 101425738 -65224558 - RSINE1 SINE B4 -30 135 64 8 1358 1032 75 13 40 chrX 101426081 101426225 -65224071 + B1_Mur4 SINE Alu 1 140 -10 8 1358 266 0 0 29 chrX 101426225 101426260 -65224036 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 1358 2717 173 64 20 chrX 101426648 101426678 -65223618 - RMER15 LTR ERVL -2 573 539 8 1358 420 20 0 0 chrX 101426678 101426727 -65223569 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1358 2717 173 64 20 chrX 101426727 101427245 -65223051 - RMER15 LTR ERVL -37 538 2 8 1358 21 0 0 0 chrX 101427581 101427602 -65222694 + AT_rich Low_complexity Low_complexity 1 21 0 8 1358 192 271 145 48 chrX 101428054 101428116 -65222180 + MIRc SINE MIR 20 87 -181 8 1358 244 325 57 32 chrX 101428124 101428248 -65222048 + B4 SINE B4 20 146 -146 8 1358 411 144 20 10 chrX 101428336 101428434 -65221862 + (CA)n Simple_repeat Simple_repeat 2 100 0 8 1358 625 224 239 20 chrX 101428585 101428934 -65221362 - L1M2 LINE L1 -629 5662 5238 8 1358 455 212 28 83 chrX 101428984 101429092 -65221204 - B1_Mur1 SINE Alu -6 143 42 8 1358 1154 68 7 0 chrX 101429122 101429268 -65221028 - B1_Mus1 SINE Alu 0 148 2 8 1358 217 327 0 0 chrX 101429269 101429321 -65220975 - B1F2 SINE Alu -96 53 2 8 1358 291 140 0 0 chrX 101429519 101429569 -65220727 + (ATG)n Simple_repeat Simple_repeat 3 52 0 8 1358 198 333 60 24 chrX 101429676 101429759 -65220537 - MIRb SINE MIR -26 242 157 8 1358 254 184 10 52 chrX 101429992 101430091 -65220205 - RMER1C Other Other -17 1325 1242 8 1358 587 275 134 12 chrX 101430173 101430420 -65219876 - RMER1B Other Other -645 421 145 8 1358 285 330 0 0 chrX 101430727 101430818 -65219478 - RMER1B Other Other -930 136 46 8 1358 765 178 6 22 chrX 101430843 101431021 -65219275 + CT-rich Low_complexity Low_complexity 2 176 0 8 1358 1493 71 48 0 chrX 101431044 101431254 -65219042 - L1_Mus3 LINE L1 -6 6632 6413 8 1358 911 183 0 0 chrX 101431255 101431397 -65218899 - B1_Mur4 SINE Alu -6 144 3 8 1358 505 73 0 0 chrX 101431488 101431556 -65218740 - B1_Mus2 SINE Alu 0 147 80 8 1358 251 322 52 0 chrX 101431702 101431788 -65218508 - MIR SINE MIR -119 149 60 8 1358 1173 62 0 0 chrX 101431829 101431974 -65218322 + B1_Mus2 SINE Alu 3 147 0 8 1358 405 0 0 0 chrX 101431994 101432039 -65218257 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1358 186 356 13 27 chrX 101432050 101432125 -65218171 + L2c LINE L2 2910 2983 -404 8 1358 236 304 42 28 chrX 101434092 101434163 -65216133 - ID4 SINE ID 0 83 12 8 1358 935 143 0 28 chrX 101434477 101434657 -65215639 - Lx2B LINE L1 -4 6996 6822 8 1358 1065 271 55 64 chrX 101435199 101435600 -65214696 - MLT1E2 LTR MaLR 0 654 287 8 1358 338 0 0 78 chrX 101435751 101435764 -65214532 + (A)n Simple_repeat Simple_repeat 1 10 0 8 1358 1213 54 0 0 chrX 101435764 101435911 -65214385 + B1_Mus2 SINE Alu 1 147 0 8 1358 338 0 0 78 chrX 101435911 101435948 -65214348 + (A)n Simple_repeat Simple_repeat 1 37 0 8 1358 690 186 16 8 chrX 101435950 101436075 -65214221 - B1_Mur1 SINE Alu -16 133 8 8 1358 1765 290 59 11 chrX 101436236 101436849 -65213447 - Lx8 LINE L1 -132 7341 6700 8 1358 977 254 31 6 chrX 101436858 101437218 -65213078 + L1_Mur3 LINE L1 1579 1947 -3933 8 1358 429 198 28 47 chrX 101437429 101437535 -65212761 - Lx9 LINE L1 -1692 5952 5849 8 1358 1670 205 72 16 chrX 101437716 101438240 -65212056 + Lx9 LINE L1 5443 6027 -1617 8 1358 476 191 30 60 chrX 101438356 101438490 -65211806 + Lx9 LINE L1 6295 6424 -1220 8 1358 942 103 37 0 chrX 101438524 101438660 -65211636 + B1_Mus1 SINE Alu 1 141 -7 8 1358 399 336 13 59 chrX 101438735 101438887 -65211409 - ID_B1 SINE B4 -1 223 79 8 1358 228 225 28 0 chrX 101438911 101438982 -65211314 - L1M2 LINE L1 -3134 3009 2937 8 1358 1247 72 21 62 chrX 101439000 101439193 -65211103 - B2_Mm2 SINE B2 -9 186 2 8 1358 22 0 0 0 chrX 101439198 101439220 -65211076 + AT_rich Low_complexity Low_complexity 1 22 0 8 1358 408 20 0 0 chrX 101439220 101439269 -65211027 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 1358 493 301 20 40 chrX 101439287 101439436 -65210860 - RSINE1 SINE B4 -19 146 1 8 1358 326 284 38 99 chrX 101439512 101439805 -65210491 - L1_Mur3 LINE L1 -3409 2471 2197 8 1358 1275 108 16 5 chrX 101439862 101440049 -65210247 - B2_Mm2 SINE B2 -6 189 1 8 1358 1681 236 15 75 chrX 101440122 101440312 -65209984 + ORR1D1 LTR MaLR 1 175 -199 8 1358 1344 68 40 0 chrX 101440312 101440488 -65209808 - B2_Mm2 SINE B2 -11 184 2 8 1358 1681 236 15 75 chrX 101440488 101440519 -65209777 + ORR1D1 LTR MaLR 176 198 -176 8 1358 3017 70 2 10 chrX 101440519 101440922 -65209374 - MTB LTR MaLR 0 400 1 8 1358 1681 236 15 75 chrX 101440922 101441097 -65209199 + ORR1D1 LTR MaLR 199 374 0 8 1358 186 250 76 38 chrX 101442045 101442124 -65208172 - L2a LINE L2 -6 3420 3339 8 1358 224 275 11 21 chrX 101443102 101443195 -65207101 + (TA)n Simple_repeat Simple_repeat 2 93 0 8 1358 1951 265 101 56 chrX 101443652 101443949 -65206347 - Charlie1a DNA MER1_type -6 1449 1171 8 1358 1084 102 0 0 chrX 101443949 101444096 -65206200 - B1_Mus2 SINE Alu 0 147 1 8 1358 1951 265 101 56 chrX 101444096 101444677 -65205619 - Charlie1a DNA MER1_type -285 1170 531 8 1358 926 197 41 5 chrX 101444692 101444886 -65205410 + Lx7 LINE L1 676 876 -6852 8 1358 6913 164 47 53 chrX 101444894 101445314 -65204982 + Lx7 LINE L1 4190 4626 -1254 8 1358 360 0 0 0 chrX 101445314 101445354 -65204942 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 1358 432 0 0 0 chrX 101445354 101445402 -65204894 + (GA)n Simple_repeat Simple_repeat 1 48 0 8 1358 6913 164 47 53 chrX 101445402 101446007 -65204289 + Lx7 LINE L1 4627 5271 -609 8 1358 1235 41 0 0 chrX 101446007 101446154 -65204142 + B1_Mus2 SINE Alu 1 147 0 8 1358 6913 164 47 53 chrX 101446154 101446588 -65203708 + Lx7 LINE L1 5272 5642 -238 8 1358 536 139 188 0 chrX 101446608 101446709 -65203587 + PB1D9 SINE Alu 1 120 0 8 1358 557 45 0 43 chrX 101446711 101446804 -65203492 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 8 1358 319 127 208 0 chrX 101446804 101446880 -65203416 + Lx7 LINE L1 5688 5815 -629 8 1358 485 223 27 0 chrX 101446886 101446998 -65203298 + Lx7 LINE L1 6064 6178 -1518 8 1358 1128 36 0 0 chrX 101446998 101447137 -65203159 + B1_Mm SINE Alu 9 147 0 8 1358 4979 219 59 15 chrX 101447139 101448057 -65202239 + Lx7 LINE L1 6172 7118 -578 8 1358 3447 67 45 2 chrX 101448057 101448519 -65201777 + RLTR45 LTR ERVK 1 482 0 8 1358 4979 219 59 15 chrX 101448519 101448671 -65201625 + Lx7 LINE L1 7119 7289 -407 8 1358 532 223 25 8 chrX 101448654 101448776 -65201520 + Lx4B LINE L1 6902 7025 -33 8 1358 285 81 0 0 chrX 101448788 101448825 -65201471 + Lx7 LINE L1 7260 7296 -400 8 1358 2095 27 11 0 chrX 101448846 101449106 -65201190 - L1_Mm LINE L1 -2686 3197 2935 8 1358 829 94 0 0 chrX 101449106 101449234 -65201062 + L1Md_T LINE L1 6455 6582 0 8 1358 702 35 0 0 chrX 101449308 101449393 -65200903 + (TTCC)n Simple_repeat Simple_repeat 4 88 0 8 1358 1140 172 84 30 chrX 101449411 101449710 -65200586 + Lx7 LINE L1 7325 7639 -57 8 169 1235 248 118 10 chrX 101449713 101450019 -65200277 - MTEa LTR MaLR -39 340 2 8 1359 1183 61 0 0 chrX 101450019 101450167 -65200129 + B1_Mus1 SINE Alu 1 148 0 8 1359 228 67 0 0 chrX 101450167 101450197 -65200099 + (A)n Simple_repeat Simple_repeat 1 30 0 8 1359 848 249 139 38 chrX 101450215 101450369 -65199927 - MTE-int LTR MaLR 0 1580 1413 8 1359 1166 22 0 0 chrX 101450369 101450504 -65199792 + B1_Mm SINE Alu 1 135 -12 8 1359 234 62 0 0 chrX 101450504 101450536 -65199760 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 8 1359 848 249 139 38 chrX 101450536 101450668 -65199628 - MTE-int LTR MaLR -168 1412 1265 8 1359 393 183 0 0 chrX 101451148 101451252 -65199044 + GA-rich Low_complexity Low_complexity 1 104 0 8 1359 589 305 13 7 chrX 101451290 101451445 -65198851 - MTEa LTR MaLR -150 229 74 8 1359 470 257 73 0 chrX 101451457 101451593 -65198703 + B1F2 SINE Alu 2 147 -2 8 1359 225 263 0 81 chrX 101452141 101452203 -65198093 - MLT1B LTR MaLR -64 326 270 8 1359 1204 41 7 0 chrX 101452500 101452646 -65197650 + B1_Mm SINE Alu 1 147 0 8 1359 182 105 26 0 chrX 101452652 101452690 -65197606 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 1359 1240 48 0 0 chrX 101453920 101454067 -65196229 + B1_Mus2 SINE Alu 1 147 0 8 1359 463 290 49 49 chrX 101454412 101454575 -65195721 + MER58A DNA MER1_type 51 213 -11 8 1359 3438 55 0 7 chrX 101454583 101455023 -65195273 - L1Md_F3 LINE L1 -14 6570 6134 8 1359 1015 74 0 0 chrX 101455236 101455371 -65194925 - B1_Mus1 SINE Alu -7 141 7 8 1359 310 242 8 8 chrX 101455269 101455402 -65194894 - ORR1B1-int LTR MaLR -755 754 622 8 1359 601 191 79 33 chrX 101455371 101455383 -65194913 - ID_B1 SINE B4 -2 217 64 8 1359 316 179 0 15 chrX 101455403 101455471 -65194825 - Lx9 LINE L1 -12 7632 7566 8 1359 435 299 58 0 chrX 101455500 101455637 -65194659 - B1F1 SINE Alu -2 147 3 8 1359 245 306 42 0 chrX 101455640 101455712 -65194584 - B1F SINE Alu -55 94 20 8 1359 1165 62 0 0 chrX 101455871 101456015 -65194281 - B1_Mus2 SINE Alu -1 146 3 8 1359 336 262 82 17 chrX 101456620 101456766 -65193530 - L1MB8 LINE L1 -331 6888 6741 9 1359 1016 225 69 4 chrX 101457570 101457853 -65192443 - L1MB8 LINE L1 -561 6483 6169 9 1359 623 213 65 6 chrX 101457857 101458138 -65192158 - MTD LTR MaLR -2 417 1 9 1359 289 231 26 0 chrX 101458180 101458258 -65192038 - L1MB8 LINE L1 -906 6100 6021 9 1359 345 359 6 69 chrX 101458266 101458442 -65191854 + B4 SINE B4 2 157 -135 9 1359 523 73 0 0 chrX 101458433 101458501 -65191795 - B2_Mm2 SINE B2 -125 70 3 9 1359 790 0 10 0 chrX 101458728 101458830 -65191466 + L1Md_A LINE L1 6480 6582 0 9 1359 1127 55 14 7 chrX 101459154 101459300 -65190996 - B1_Mus2 SINE Alu 0 147 1 9 1359 2272 48 17 17 chrX 101459340 101459638 -65190658 + L1_Mus1 LINE L1 6270 6567 0 9 1359 550 317 7 52 chrX 101459643 101459796 -65190500 + B4 SINE B4 145 290 -2 9 1359 946 264 70 49 chrX 101459828 101460046 -65190250 - L1MB8 LINE L1 -1016 5990 5774 9 1359 1025 88 0 58 chrX 101460046 101460202 -65190094 - B1_Mus2 SINE Alu 0 147 1 9 1359 946 264 70 49 chrX 101460202 101460315 -65189981 - L1MB8 LINE L1 -1233 5773 5654 9 1359 5756 56 14 40 chrX 101460315 101461119 -65189177 + L1_Mus3 LINE L1 5849 6631 -7 9 1359 946 264 70 49 chrX 101461119 101461232 -65189064 - L1MB8 LINE L1 -1353 5653 5537 9 1359 303 303 7 66 chrX 101461206 101461358 -65188938 - L1MB8 LINE L1 -1989 5017 4875 9 1359 1231 27 7 0 chrX 101461466 101461612 -65188684 + B1_Mm SINE Alu 1 147 0 9 1359 183 42 0 0 chrX 101461693 101461717 -65188579 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 9 1359 673 281 28 0 chrX 101461724 101461902 -65188394 + B3A SINE B2 16 198 0 9 1359 41163 5 0 0 chrX 101461922 101468434 -65181862 - L1Md_A LINE L1 0 6582 71 9 1359 520 283 68 8 chrX 101468443 101468678 -65181618 - L1MB8 LINE L1 -2143 4863 4615 9 1359 549 263 30 0 chrX 101468679 101468812 -65181484 + ORR1E LTR MaLR 1 137 -222 9 1359 344 269 14 95 chrX 101469322 101469455 -65180841 - L1MB8 LINE L1 -2546 4460 4339 9 1359 1203 61 0 0 chrX 101469455 101469602 -65180694 - B1_Mus2 SINE Alu 0 147 1 9 1359 344 269 14 95 chrX 101469602 101469678 -65180618 - L1MB8 LINE L1 -2668 4338 4268 9 1359 420 283 109 42 chrX 101469693 101469885 -65180411 - L1MA9 LINE L1 -280 6032 5828 9 1359 394 218 132 22 chrX 101469913 101470012 -65180284 - L1MC LINE L1 -2944 3202 3098 9 1359 1492 39 55 0 chrX 101470012 101470193 -65180103 - B2_Mm1t SINE B2 -2 191 1 9 1359 394 218 132 22 chrX 101470193 101470229 -65180067 - L1MC LINE L1 -3049 3097 3053 9 1359 471 78 0 0 chrX 101470297 101470361 -65179935 + (TCCC)n Simple_repeat Simple_repeat 1 64 0 9 1359 432 207 255 10 chrX 101470369 101470569 -65179727 - L1MB8 LINE L1 -3245 3761 3513 9 1359 356 127 159 0 chrX 101470883 101470946 -65179350 - Lx8 LINE L1 -372 7101 7029 9 1359 1187 55 0 0 chrX 101471094 101471239 -65179057 + B1_Mus2 SINE Alu 1 145 -2 9 1359 2470 230 110 114 chrX 101471731 101472624 -65177672 - Lx8 LINE L1 0 7473 6585 9 1359 938 179 119 5 chrX 101473003 101473205 -65177091 + URR1B DNA MER1_type 1 225 0 9 1359 380 307 53 87 chrX 101473460 101473667 -65176629 + MLT1A0 LTR MaLR 3 202 -163 9 1359 239 232 57 14 chrX 101473708 101473778 -65176518 + MLT1A0 LTR MaLR 336 408 0 9 1359 401 290 71 53 chrX 101473867 101474093 -65176203 - L1MB8 LINE L1 -7016 318 89 9 1359 863 125 0 15 chrX 101474129 101474259 -65176037 - B1_Mm SINE Alu -5 142 15 9 1359 833 207 16 43 chrX 101474267 101474454 -65175842 - B3A SINE B2 -16 182 1 9 1359 642 108 0 0 chrX 101474465 101474558 -65175738 - Lx2 LINE L1 -746 6251 6159 9 1359 4237 104 19 31 chrX 101474558 101475239 -65175057 + Lx2 LINE L1 6325 6997 0 9 1359 192 274 0 31 chrX 101475420 101475481 -65174815 + MIRc SINE MIR 111 167 -41 9 1359 29 0 0 0 chrX 101476737 101476766 -65173530 + AT_rich Low_complexity Low_complexity 1 29 0 9 1359 237 259 0 0 chrX 101477866 101477920 -65172376 - FAM SINE Alu 0 315 262 9 1359 321 254 57 0 chrX 101477888 101477981 -65172315 - PB1 SINE Alu -11 116 1 9 1359 1341 86 0 0 chrX 101478009 101478184 -65172112 - B2_Mm1t SINE B2 -17 176 2 9 1359 310 198 31 87 chrX 101480593 101480720 -65169576 - L1MC4 LINE L1 -202 7759 7640 9 1359 1281 53 6 18 chrX 101480729 101480741 -65169555 - B2_Mm1a SINE B2 -23 170 160 9 1359 297 0 0 0 chrX 101480741 101480774 -65169522 + (TTAA)n Simple_repeat Simple_repeat 2 34 0 9 1359 1281 53 6 18 chrX 101480774 101480932 -65169364 - B2_Mm1a SINE B2 -34 159 2 9 1359 6088 117 28 25 chrX 101481049 101482028 -65168268 + Lx2 LINE L1 6015 6995 -2 9 1359 577 237 77 108 chrX 101482240 101482434 -65167862 + B3A SINE B2 9 196 -2 9 1359 990 267 163 14 chrX 101482461 101483097 -65167199 - L1MC4 LINE L1 -607 7435 6705 9 1359 1357 203 176 6 chrX 101483397 101483744 -65166552 + MTD LTR MaLR 14 419 0 9 1359 396 59 0 0 chrX 101483842 101483893 -65166403 + (TA)n Simple_repeat Simple_repeat 2 52 0 9 1359 263 358 0 10 chrX 101484098 101484194 -65166102 - HAL1 LINE L1 -2174 333 239 9 1359 275 333 13 0 chrX 101484997 101485075 -65165221 + ID4_ SINE ID 3 81 -2 9 1359 1192 90 25 73 chrX 101485383 101485587 -65164709 - B2_Mm2 SINE B2 -1 194 1 9 1359 1222 48 0 0 chrX 101485654 101485800 -65164496 - B1_Mus2 SINE Alu -1 146 1 9 1359 378 244 24 39 chrX 101487040 101487156 -65163140 - B1F1 SINE Alu -2 147 2 9 1359 675 0 0 0 chrX 101487334 101487409 -65162887 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 9 1359 3390 75 11 2 chrX 101487574 101488026 -65162270 - L1Md_F2 LINE L1 0 6582 6127 9 1359 422 120 13 0 chrX 101488479 101488554 -65161742 + (TTTCC)n Simple_repeat Simple_repeat 5 80 0 9 1359 1215 0 0 0 chrX 101488561 101488696 -65161600 + (TCTCCC)n Simple_repeat Simple_repeat 6 140 0 9 1359 817 83 50 8 chrX 101488696 101488809 -65161487 - B1_Mus1 SINE Alu -28 120 2 9 1359 1226 190 14 0 chrX 101489510 101489731 -65160565 + URR1A DNA MER1_type 2 225 -1 9 1359 1280 88 11 16 chrX 101490047 101490232 -65160064 - B2_Mm1t SINE B2 -8 185 2 9 1359 1147 56 0 7 chrX 101490446 101490590 -65159706 - B1_Mus1 SINE Alu -5 143 1 9 1359 1307 108 0 5 chrX 101490601 101490787 -65159509 - B2_Mm2 SINE B2 -10 185 1 9 1359 379 349 129 30 chrX 101491504 101492068 -65158228 - L1ME4a LINE L1 -130 5994 5375 9 1359 427 236 72 45 chrX 101492515 101492626 -65157670 + PB1D7 SINE Alu 6 119 -1 9 1359 29 60 0 0 chrX 101492770 101492820 -65157476 + AT_rich Low_complexity Low_complexity 1 50 0 9 1359 819 235 61 84 chrX 101492987 101493201 -65157095 + B3 SINE B2 2 210 -6 9 1359 301 309 163 23 chrX 101493293 101493508 -65156788 - L1M5 LINE L1 -367 5757 5513 9 1359 234 150 0 0 chrX 101493780 101493820 -65156476 + (TTGG)n Simple_repeat Simple_repeat 3 42 0 9 1359 186 304 0 0 chrX 101493838 101493884 -65156412 - MER5A DNA MER1_type -25 164 119 9 1359 310 292 14 0 chrX 101494041 101494113 -65156183 - PB1D7 SINE Alu -43 77 5 9 1359 1226 57 6 0 chrX 101494270 101494428 -65155868 + B2_Mm1a SINE B2 2 160 -33 9 1359 315 0 0 0 chrX 101494428 101494463 -65155833 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 9 1359 252 0 0 0 chrX 101494473 101494501 -65155795 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 9 1359 223 225 12 165 chrX 101494908 101494993 -65155303 + PB1D9 SINE Alu 49 120 0 9 1359 1057 122 196 0 chrX 101495846 101496035 -65154261 - URR1A DNA MER1_type 0 226 1 9 1359 213 159 0 0 chrX 101497556 101497600 -65152696 + (TA)n Simple_repeat Simple_repeat 2 45 0 9 1359 250 305 31 31 chrX 101499902 101500000 -65150296 - Charlie19a DNA Charlie -1 385 288 9 1359 30 59 0 0 chrX 101500964 101501015 -65149281 + AT_rich Low_complexity Low_complexity 1 51 0 1 1359 1169 42 14 0 chrX 101501508 101501652 -65148644 + B1_Mus2 SINE Alu 1 146 -1 2 1359 233 70 0 44 chrX 101501655 101501700 -65148596 + (CAAAAA)n Simple_repeat Simple_repeat 6 48 0 3 1359 1073 70 28 0 chrX 101502788 101502931 -65147365 - B1_Mus1 SINE Alu 0 148 2 4 1359 282 160 0 16 chrX 101503044 101503111 -65147185 - L1MC4a LINE L1 -128 7754 7696 5 1359 281 280 65 9 chrX 101503137 101503245 -65147051 - L1MD2 LINE L1 -207 6152 6039 6 1359 1326 230 34 42 chrX 101503279 101503755 -65146541 + L1_Rod LINE L1 1237 1708 -4139 7 1359 505 252 81 40 chrX 101503850 101504098 -65146198 + L1_Mur3 LINE L1 5203 5460 -420 8 1359 1267 252 64 15 chrX 101504181 101504588 -65145708 + L1_Rod LINE L1 5421 5847 0 9 1359 593 190 74 4 chrX 101504714 101504915 -65145381 + Lx9 LINE L1 7401 7641 -3 1 1359 347 243 81 36 chrX 101505117 101505228 -65145068 + MLT1A1 LTR MaLR 291 406 -2 1 1359 192 200 0 0 chrX 101505384 101505434 -65144862 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1359 1302 60 16 57 chrX 101505671 101505865 -65144431 - B2_Mm1t SINE B2 -6 187 2 1 1359 422 268 35 9 chrX 101505940 101506053 -65144243 + PB1D7 SINE Alu 5 120 0 1 1359 529 176 28 38 chrX 101506182 101506288 -65144008 + ORR1C2 LTR MaLR 280 384 0 1 1359 5506 221 46 50 chrX 101506288 101507551 -65142745 + ORR1C2-int LTR MaLR 1 1266 -104 1 1359 1845 67 50 25 chrX 101507551 101507828 -65142468 - Lx3_Mus LINE L1 0 7009 6726 1 1359 5506 221 46 50 chrX 101507828 101507925 -65142371 + ORR1C2-int LTR MaLR 1267 1356 -14 1 1359 1291 186 228 13 chrX 101507927 101508243 -65142053 + ORR1C2 LTR MaLR 1 384 0 1 1359 280 266 45 61 chrX 101508404 101508536 -65141760 + MLT1A LTR MaLR 234 363 -11 1 1359 712 200 8 0 chrX 101508505 101508630 -65141666 - B1_Mur1 SINE Alu -21 128 3 1 1359 267 31 0 0 chrX 101509068 101509100 -65141196 + (GA)n Simple_repeat Simple_repeat 2 33 0 1 1359 504 296 73 52 chrX 101509314 101509642 -65140654 + Lx9 LINE L1 7308 7642 -2 2 1359 1896 180 49 74 chrX 101509691 101510123 -65140173 - MTC LTR MaLR 0 421 1 2 1359 1131 50 0 0 chrX 101510875 101511014 -65139282 + B1_Mm SINE Alu 1 139 -8 2 1359 358 331 67 6 chrX 101511127 101511306 -65138990 + L1MCa LINE L1 244 433 -6318 2 1359 773 301 31 40 chrX 101511766 101512172 -65138124 + L1MCa LINE L1 391 944 -5807 2 1359 294 286 14 2 chrX 101512177 101512251 -65138045 + B3A SINE B2 29 101 -115 2 1359 743 48 0 0 chrX 101512251 101512356 -65137940 + L1Md_T LINE L1 6454 6558 -24 2 1359 352 287 59 70 chrX 101512367 101512555 -65137741 + L1MCa LINE L1 2656 2841 -3723 2 1359 985 33 0 0 chrX 101512571 101512691 -65137605 - B1_Mm SINE Alu 0 147 28 2 1359 775 262 47 40 chrX 101512702 101512780 -65137516 + L1MCa LINE L1 2847 2914 -3650 2 1359 300 127 0 0 chrX 101512780 101512835 -65137461 + (ATTG)n Simple_repeat Simple_repeat 3 57 0 2 1359 775 253 47 17 chrX 101512835 101513101 -65137195 + L1MCa LINE L1 2915 3187 -3377 2 1359 358 136 23 0 chrX 101513117 101513183 -65137113 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 1359 417 39 0 0 chrX 101513183 101513234 -65137062 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1359 358 136 23 0 chrX 101513234 101513255 -65137041 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 1359 442 224 75 124 chrX 101513268 101513425 -65136871 + L1MCa LINE L1 3202 3361 -3203 2 1359 826 299 5 0 chrX 101513425 101513639 -65136657 + ID_B1 SINE B4 3 217 -7 3 1359 442 224 75 124 chrX 101513639 101513746 -65136550 + L1MCa LINE L1 3362 3453 -3111 2 1359 676 117 62 9 chrX 101513834 101513946 -65136350 + PB1D9 SINE Alu 3 120 0 3 1359 2004 159 30 0 chrX 101514213 101514546 -65135750 + Lx6 LINE L1 5447 5789 -88 3 1359 1199 14 40 0 chrX 101514548 101514696 -65135600 + B2_Mm1t SINE B2 2 155 -38 3 1359 207 0 0 0 chrX 101514697 101514720 -65135576 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 3 1359 2458 213 71 24 chrX 101514736 101515353 -65134943 + Lx6 LINE L1 5782 6427 -1033 3 1359 1989 237 92 49 chrX 101515360 101515991 -65134305 + Lx6 LINE L1 6786 7443 -17 3 1359 204 233 132 28 chrX 101516768 101516874 -65133422 + L2 LINE L2 2344 2460 -959 3 1359 3405 50 19 2 chrX 101516989 101517413 -65132883 - L1Md_F2 LINE L1 -25 6557 6127 3 1359 333 0 0 0 chrX 101517664 101517701 -65132595 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1359 237 163 0 0 chrX 101518065 101518108 -65132188 + U5 snRNA snRNA 1 43 -73 3 1359 255 61 0 0 chrX 101518878 101518911 -65131385 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 4 1359 492 18 0 0 chrX 101518917 101518974 -65131322 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 1359 189 0 0 0 chrX 101518974 101518994 -65131302 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1359 375 333 67 15 chrX 101518996 101519130 -65131166 - RSINE1 SINE B4 -13 152 12 4 1359 228 350 25 89 chrX 101519259 101519416 -65130880 + L2 LINE L2 2626 2772 -647 3 1359 1359 167 7 35 chrX 101519574 101519859 -65130437 + L1Md_F2 LINE L1 6305 6581 -1 4 1359 319 211 35 0 chrX 101519958 101520015 -65130281 + ID_B1 SINE B4 151 209 -15 4 1359 214 282 11 34 chrX 101520015 101520103 -65130193 + GA-rich Low_complexity Low_complexity 3 88 0 4 1359 24741 153 20 15 chrX 101520302 101524475 -65125821 - Lx LINE L1 0 6654 2461 4 1359 1101 68 0 40 chrX 101524475 101524627 -65125669 - B1_Mus2 SINE Alu 0 147 2 4 1359 24741 123 28 14 chrX 101524627 101526517 -65123779 - Lx LINE L1 -3423 2460 549 4 1359 1375 85 21 0 chrX 101526521 101526710 -65123586 - B2_Mm2 SINE B2 -1 194 2 4 1359 21 0 0 0 chrX 101527011 101527032 -65123264 + AT_rich Low_complexity Low_complexity 1 21 0 5 1359 1163 69 0 0 chrX 101527153 101527297 -65122999 + B1_Mus1 SINE Alu 2 145 -3 5 1359 570 231 22 30 chrX 101528606 101528740 -65121556 + RSINE1 SINE B4 31 163 -2 5 1359 308 103 0 17 chrX 101528754 101528813 -65121483 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 1359 3198 51 5 0 chrX 101528966 101529360 -65120936 - MTA_Mm LTR MaLR 0 396 1 5 1359 7762 65 42 3 chrX 101529360 101530417 -65119879 - MTA_Mm-int LTR MaLR 0 1098 1 5 1359 2949 61 5 53 chrX 101530417 101530833 -65119463 - MTA_Mm LTR MaLR 0 396 1 5 1359 282 310 39 0 chrX 101530898 101530995 -65119301 + PB1D10 SINE Alu 16 120 0 5 1359 3019 130 2 2 chrX 101531231 101531685 -65118611 - Lx LINE L1 -12 6642 6189 5 1359 738 302 27 61 chrX 101531810 101532106 -65118190 - B4A SINE B4 -6 286 1 5 1359 469 213 276 6 chrX 101532944 101533114 -65117182 - B3 SINE B2 0 216 1 5 1359 528 250 118 55 chrX 101534199 101534436 -65115860 + RLTR42-int LTR ERVK 1149 1400 -4122 5 1359 195 42 0 0 chrX 101534744 101534768 -65115528 + (TATATG)n Simple_repeat Simple_repeat 4 27 0 6 1359 219 236 36 0 chrX 101534768 101534823 -65115473 + (CCTA)n Simple_repeat Simple_repeat 3 59 0 6 1359 25 0 0 0 chrX 101534872 101534897 -65115399 + AT_rich Low_complexity Low_complexity 1 25 0 6 1359 262 352 17 76 chrX 101534993 101535165 -65115131 + RSINE1 SINE B4 4 165 0 6 1359 240 377 0 0 chrX 101535518 101535595 -65114701 + L2b LINE L2 3279 3355 -20 6 1359 380 325 102 37 chrX 101535781 101536027 -65114269 - MIR SINE MIR 0 262 1 6 1359 222 324 13 13 chrX 101536742 101536817 -65113479 + GA-rich Low_complexity Low_complexity 1 75 0 6 1359 328 299 0 22 chrX 101537214 101537303 -65112993 + PB1D10 SINE Alu 31 117 0 6 1359 927 154 0 0 chrX 101537423 101537559 -65112737 - B1_Mus1 SINE Alu -11 137 2 6 1359 22 0 0 0 chrX 101538279 101538301 -65111995 + AT_rich Low_complexity Low_complexity 1 22 0 6 1359 27 0 0 0 chrX 101538363 101538390 -65111906 + AT_rich Low_complexity Low_complexity 1 27 0 7 1359 1198 48 0 0 chrX 101538603 101538749 -65111547 - B1_Mm SINE Alu 0 147 2 7 1359 1605 37 0 0 chrX 101538857 101539047 -65111249 + B2_Mm1t SINE B2 1 190 -3 7 1359 21 57 0 0 chrX 101543847 101543882 -65106414 + AT_rich Low_complexity Low_complexity 1 35 0 7 1359 277 289 25 25 chrX 101545175 101545374 -65104922 + L1_Mur3 LINE L1 1444 1642 -4238 7 1359 1172 74 0 0 chrX 101545403 101545551 -65104745 + B1_Mus1 SINE Alu 1 148 0 7 1359 276 30 0 0 chrX 101545560 101545593 -65104703 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 7 1359 304 321 104 76 chrX 101545599 101545993 -65104303 + L1MEg LINE L1 1156 1560 -4524 7 1359 618 317 148 31 chrX 101546068 101546903 -65103393 + L1MA5 LINE L1 2131 3070 -3073 7 1359 459 0 0 0 chrX 101546903 101546954 -65103342 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 7 1359 618 317 148 31 chrX 101546954 101547291 -65103005 + L1MA5 LINE L1 3071 3440 -2703 7 1359 252 133 22 0 chrX 101547302 101547347 -65102949 + MTD LTR MaLR 92 137 -282 8 1359 1811 261 120 119 chrX 101547346 101548422 -65101874 + MTD-int LTR MaLR 22 1258 0 8 1359 1565 195 95 71 chrX 101548422 101548614 -65101682 + MTD LTR MaLR 1 210 -209 8 1359 3252 29 0 0 chrX 101548614 101548996 -65101300 + L1Md_A LINE L1 6201 6582 0 8 1359 1565 195 95 71 chrX 101548996 101549212 -65101084 + MTD LTR MaLR 211 419 0 8 1359 427 228 250 0 chrX 101549212 101549344 -65100952 + L1MA5 LINE L1 5624 5803 -497 7 1359 201 39 0 0 chrX 101549344 101549370 -65100926 + (CA)n Simple_repeat Simple_repeat 1 26 0 8 1359 427 207 311 0 chrX 101549370 101549434 -65100862 + L1MA5 LINE L1 5804 5905 -395 7 1359 1548 232 10 0 chrX 101549556 101549862 -65100434 + Lx9 LINE L1 6435 6743 -901 8 1359 1318 240 15 73 chrX 101550318 101550646 -65099650 - MTE2a LTR MaLR -14 365 57 8 1359 387 183 541 14 chrX 101550648 101550796 -65099500 - Lx7 LINE L1 -388 7308 7083 8 1359 263 231 0 0 chrX 101550799 101550851 -65099445 - MTE2a LTR MaLR -327 52 1 8 1359 598 276 143 75 chrX 101551261 101551527 -65098769 + MTE2a LTR MaLR 41 324 -55 8 1359 30 69 0 0 chrX 101551684 101551742 -65098554 + AT_rich Low_complexity Low_complexity 1 58 0 8 1359 255 342 12 0 chrX 101551798 101551897 -65098399 + ID4 SINE ID 3 102 -50 8 1359 1141 53 138 23 chrX 101552375 101552549 -65097747 + B2_Mm2 SINE B2 2 195 0 9 1359 791 182 381 12 chrX 101552642 101552897 -65097399 + Lx7 LINE L1 7056 7404 -292 9 1359 474 65 0 0 chrX 101552904 101552966 -65097330 + (TG)n Simple_repeat Simple_repeat 1 62 0 9 1359 423 138 0 49 chrX 101552968 101553090 -65097206 + (CAGAGA)n Simple_repeat Simple_repeat 2 117 0 9 1359 965 302 63 103 chrX 101553341 101553465 -65096831 - L1MA9 LINE L1 -91 6221 6093 9 1359 876 248 19 28 chrX 101553465 101553681 -65096615 + B3 SINE B2 3 216 0 9 1359 965 302 63 103 chrX 101553681 101554335 -65095961 - L1MA9 LINE L1 -220 6092 5474 9 1359 195 129 0 0 chrX 101554342 101554373 -65095923 + (TTTC)n Simple_repeat Simple_repeat 4 34 0 9 1359 992 71 0 21 chrX 101554375 101554518 -65095778 - B1_Mus1 SINE Alu 0 148 9 9 1359 777 259 34 14 chrX 101554528 101554931 -65095365 - L1MA9 LINE L1 -848 5443 5026 9 1359 5904 178 53 8 chrX 101554948 101557107 -65093189 + L1_Mur3 LINE L1 17 2061 -3819 9 1359 3548 176 45 4 chrX 101557105 101557791 -65092505 + Lx7 LINE L1 6212 6925 -771 9 1359 1016 278 92 26 chrX 101557766 101558102 -65092194 + Lx6 LINE L1 6995 7345 -115 1 1359 330 45 0 0 chrX 101558102 101558146 -65092150 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1359 1016 278 92 26 chrX 101558146 101558190 -65092106 + Lx6 LINE L1 7346 7400 -60 1 1359 31 44 0 0 chrX 101558515 101558560 -65091736 + AT_rich Low_complexity Low_complexity 1 45 0 1 1359 519 277 7 0 chrX 101558565 101558720 -65091576 - L1MA9 LINE L1 -1310 4830 4675 9 1359 983 56 0 0 chrX 101558723 101558849 -65091447 + B1_Mm SINE Alu 1 126 -21 1 1359 223 254 87 29 chrX 101558993 101559062 -65091234 - ID SINE ID -144 80 8 1 1359 459 242 34 93 chrX 101559071 101559340 -65090956 - L1MA9 LINE L1 -1536 4607 4355 9 1359 583 323 60 12 chrX 101559340 101559591 -65090705 - MER58B DNA MER1_type -30 311 49 1 1359 256 300 50 0 chrX 101559846 101559906 -65090390 + RSINE1 SINE B4 45 107 -58 1 1359 1949 140 221 2 chrX 101559925 101560319 -65089977 + RLTR24 LTR ERV1 50 529 0 1 1359 303 294 0 56 chrX 101560728 101560854 -65089442 + BC1_Mm scRNA scRNA 3 121 -31 1 1359 593 305 97 41 chrX 101562378 101562645 -65087651 + B4A SINE B4 2 283 -9 1 1359 450 0 0 0 chrX 101562679 101562729 -65087567 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1359 272 298 107 0 chrX 101563257 101563341 -65086955 - MIRc SINE MIR -105 163 71 1 1359 381 22 0 0 chrX 101563798 101563844 -65086452 + (TATG)n Simple_repeat Simple_repeat 3 48 0 1 1359 2266 102 3 29 chrX 101563844 101564213 -65086083 - Lx LINE L1 -30 6624 6265 1 1359 657 218 206 0 chrX 101564578 101564748 -65085548 + B3 SINE B2 3 207 -9 1 1359 28 0 0 0 chrX 101564863 101564891 -65085405 + AT_rich Low_complexity Low_complexity 1 28 0 1 1359 271 259 19 0 chrX 101564955 101565009 -65085287 - B1F1 SINE Alu -88 61 7 1 1359 217 308 14 97 chrX 101565009 101565027 -65085269 - B4A SINE B4 -146 146 81 1 1359 1112 58 57 19 chrX 101565072 101565210 -65085086 + B2_Mm1t SINE B2 14 160 -33 1 1359 195 42 0 0 chrX 101565210 101565234 -65085062 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 1 1359 1112 58 57 19 chrX 101565234 101565253 -65085043 + B2_Mm1t SINE B2 161 177 -16 1 1359 869 183 200 0 chrX 101565514 101565689 -65084607 + B3 SINE B2 2 211 -5 1 1359 250 277 7 33 chrX 101565692 101565845 -65084451 + A-rich Low_complexity Low_complexity 3 151 0 1 1359 1109 211 56 83 chrX 101565850 101566223 -65084073 + L1_Mur1 LINE L1 5 367 -6617 1 1359 3269 139 57 0 chrX 101566247 101566776 -65083520 + L1_Mur1 LINE L1 676 1240 -5744 1 1359 584 136 165 0 chrX 101566776 101566879 -65083417 + PB1D9 SINE Alu 1 120 0 1 1359 3269 80 0 86 chrX 101566879 101567193 -65083103 + L1_Mur1 LINE L1 1241 1554 -4332 1 1359 9506 72 57 26 chrX 101567193 101569575 -65080721 + Lx3_Mus LINE L1 4556 7009 0 1 1359 22 35 0 0 chrX 101569575 101569604 -65080692 + AT_rich Low_complexity Low_complexity 1 29 0 1 1359 497 262 219 22 chrX 101569859 101570564 -65079732 + L1M4 LINE L1 4698 5534 -650 1 1359 893 305 100 51 chrX 101570646 101570896 -65079400 - Tigger7 DNA MER2_type -2033 458 198 1 1359 620 253 117 102 chrX 101570896 101571248 -65079048 + ORR1E LTR MaLR 1 357 -2 1 1359 893 305 100 51 chrX 101571248 101571426 -65078870 - Tigger7 DNA MER2_type -2294 197 9 1 1359 186 43 0 0 chrX 101571496 101571519 -65078777 + (CATATA)n Simple_repeat Simple_repeat 4 26 0 1 1359 252 222 0 53 chrX 101571765 101571822 -65078474 - ID_B1 SINE B4 0 224 171 1 1359 259 239 27 53 chrX 101571773 101571848 -65078448 - PB1D10 SINE Alu -8 109 37 1 1359 612 216 60 0 chrX 101571995 101572129 -65078167 + B1F SINE Alu 1 142 -7 1 1359 918 225 45 10 chrX 101572359 101572561 -65077735 - B3 SINE B2 -7 209 1 1 1359 662 295 140 75 chrX 101572629 101572951 -65077345 + MER2 DNA MER2_type 2 344 -1 1 1359 322 223 104 28 chrX 101573126 101573232 -65077064 + PB1D7 SINE Alu 1 114 -6 1 1359 378 165 0 0 chrX 101573715 101573794 -65076502 + CT-rich Low_complexity Low_complexity 1 79 0 1 1359 633 261 52 0 chrX 101573794 101573928 -65076368 - B1_Mur3 SINE Alu -8 141 1 1 1359 360 178 54 22 chrX 101573980 101574072 -65076224 + L1MA5A LINE L1 6196 6290 -7 1 1359 810 192 228 0 chrX 101574083 101574250 -65076046 + B3 SINE B2 1 205 -11 1 1359 213 220 140 0 chrX 101574278 101574328 -65075968 + PB1D10 SINE Alu 24 80 -37 1 1359 225 283 0 0 chrX 101574397 101574450 -65075846 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 1 1359 717 298 50 14 chrX 101574476 101574697 -65075599 + B4A SINE B4 3 231 -61 1 1359 723 169 178 10 chrX 101574991 101575261 -65075035 + L1_Rod LINE L1 1076 1384 -4463 1 1359 3307 38 2 2 chrX 101575261 101575656 -65074640 - MTA_Mm LTR MaLR 0 396 2 1 1359 723 199 151 20 chrX 101575656 101575738 -65074558 + L1_Rod LINE L1 1385 1499 -4348 1 1359 827 159 35 12 chrX 101576055 101576227 -65074069 - Lx4A LINE L1 -9 7049 6874 1 1359 218 309 18 0 chrX 101576265 101576320 -65073976 - ID4 SINE ID -18 65 10 1 1359 300 255 36 54 chrX 101576328 101576440 -65073856 - L1M5 LINE L1 -796 5444 5335 1 1359 5808 80 44 4 chrX 101576450 101577263 -65073033 - L1_Mus4 LINE L1 -3 6633 5788 1 1359 284 0 0 27 chrX 101577271 101577308 -65072988 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 1 1359 716 23 0 1 chrX 101578010 101578104 -65072192 - Lx LINE L1 -857 5797 5703 1 1359 1985 102 100 69 chrX 101578108 101578166 -65072130 + L1_Mm LINE L1 5246 5287 -596 1 1359 1432 23 0 0 chrX 101578166 101578337 -65071959 + L1Md_F2 LINE L1 6398 6568 -14 1 1359 1985 102 100 69 chrX 101578337 101578657 -65071639 + L1_Mm LINE L1 5288 5636 -247 1 1359 982 142 0 0 chrX 101578804 101578945 -65071351 + B1_Mur3 SINE Alu 2 142 -7 1 1359 328 286 58 74 chrX 101579700 101579821 -65070475 + PB1D7 SINE Alu 1 119 -1 1 1359 1000 212 15 15 chrX 101580028 101580224 -65070072 - B3 SINE B2 -5 211 16 1 1359 441 0 0 0 chrX 101580226 101580275 -65070021 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 1359 411 21 0 0 chrX 101580275 101580322 -65069974 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1359 488 91 11 0 chrX 101580322 101580410 -65069886 + (GA)n Simple_repeat Simple_repeat 2 90 0 1 1359 584 229 194 0 chrX 101580410 101580585 -65069711 - ID_B1 SINE B4 -12 212 4 1 169 233 355 95 32 chrX 101580645 101580834 -65069462 + L2c LINE L2 3038 3238 -149 1 1360 557 162 143 0 chrX 101581323 101581428 -65068868 - PB1D9 SINE Alu 0 120 1 1 1360 715 256 116 19 chrX 101582732 101583165 -65067131 + L1M3 LINE L1 4691 5165 -975 1 1360 734 255 0 0 chrX 101583261 101583422 -65066874 + Tigger7 DNA MER2_type 248 408 -2083 1 1360 4568 100 22 18 chrX 101583469 101584144 -65066152 + Lx LINE L1 5964 6641 -13 1 1360 3530 89 2 4 chrX 101584144 101584653 -65065643 + L1_Mus3 LINE L1 6111 6618 -20 1 1360 21 36 0 0 chrX 101584697 101584725 -65065571 + AT_rich Low_complexity Low_complexity 1 28 0 1 1360 437 275 108 0 chrX 101584729 101584896 -65065400 + L1M3 LINE L1 5483 5667 -507 1 1360 759 208 78 59 chrX 101585120 101585160 -65065136 + B3 SINE B2 3 35 -181 1 1360 414 0 0 0 chrX 101585160 101585206 -65065090 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 1 1360 759 208 78 59 chrX 101585206 101585369 -65064927 + B3 SINE B2 36 210 -6 1 1360 272 114 31 83 chrX 101585771 101585807 -65064489 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 1360 1112 50 50 0 chrX 101585807 101585947 -65064349 + B1_Mus2 SINE Alu 1 147 0 1 1360 272 114 31 83 chrX 101585947 101585988 -65064308 + (CAAA)n Simple_repeat Simple_repeat 4 43 0 1 1360 1124 61 0 52 chrX 101585988 101586143 -65064153 + B1_Mus1 SINE Alu 2 148 0 1 1360 272 114 31 83 chrX 101586143 101586160 -65064136 + (CAAA)n Simple_repeat Simple_repeat 4 20 0 1 1360 386 283 27 54 chrX 101586352 101586464 -65063832 + PB1D10 SINE Alu 1 109 -8 1 1360 1471 215 92 22 chrX 101586615 101587106 -65063190 + L1MC4a LINE L1 6897 7421 -461 1 1360 208 314 181 26 chrX 101587453 101587718 -65062578 + L2a LINE L2 2332 2637 -782 1 1360 257 371 55 65 chrX 101587688 101588165 -65062131 + L2a LINE L2 2926 3417 -9 1 1360 461 289 134 46 chrX 101588505 101588766 -65061530 + B4 SINE B4 1 284 -8 1 1360 222 344 0 30 chrX 101589012 101589111 -65061185 - MIRc SINE MIR -33 235 140 1 1360 934 233 8 45 chrX 101589367 101589614 -65060682 - MER2 DNA MER2_type -2 343 106 1 1360 675 226 52 58 chrX 101589802 101589834 -65060462 - RSINE1 SINE B4 -4 161 135 1 1360 275 85 0 21 chrX 101589834 101589882 -65060414 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1360 675 226 52 58 chrX 101589882 101590004 -65060292 - RSINE1 SINE B4 -31 134 8 1 1360 357 296 0 0 chrX 101590014 101590085 -65060211 - MER2 DNA MER2_type -273 72 2 1 1360 276 298 144 55 chrX 101590109 101590290 -65060006 + MER3 DNA MER1_type 13 209 0 1 1360 348 188 0 0 chrX 101590502 101590571 -65059725 + (CATA)n Simple_repeat Simple_repeat 2 70 0 1 1360 243 125 0 0 chrX 101591076 101591116 -65059180 + (CACG)n Simple_repeat Simple_repeat 4 43 0 1 1360 336 264 46 28 chrX 101591122 101591231 -65059065 + MLT1B LTR MaLR 9 119 -271 1 1360 21 0 0 0 chrX 101591400 101591421 -65058875 + AT_rich Low_complexity Low_complexity 1 21 0 1 1360 344 282 0 49 chrX 101591755 101591837 -65058459 + ID4_ SINE ID 6 83 0 1 1360 758 150 19 70 chrX 101591885 101592043 -65058253 + B1_Mur4 SINE Alu 1 150 0 1 1360 477 233 39 70 chrX 101593057 101593186 -65057110 - RSINE1 SINE B4 -38 127 3 1 1360 257 317 65 32 chrX 101593213 101593337 -65056959 + Charlie4z DNA MER1_type 40 167 0 1 1360 7614 92 10 9 chrX 101593358 101594969 -65055327 + L1_Mus4 LINE L1 5016 6636 0 1 1360 291 264 60 94 chrX 101595269 101595386 -65054910 + MT2B LTR ERVL 150 262 -339 1 1360 524 240 30 0 chrX 101595286 101595386 -65054910 + PB1D10 SINE Alu 4 106 -11 1 1360 380 280 58 43 chrX 101595386 101595424 -65054872 + ID_B1 SINE B4 85 224 0 1 1360 280 221 36 83 chrX 101595609 101595693 -65054603 + B3 SINE B2 2 81 -135 1 1360 417 97 0 0 chrX 101595706 101595778 -65054518 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 1360 330 239 25 25 chrX 101595831 101595929 -65054367 + B1_Mus2 SINE Alu 21 118 -31 1 1360 3948 167 46 37 chrX 101595879 101596254 -65054042 + ORR1B1-int LTR MaLR 714 1112 -397 1 1360 387 0 0 0 chrX 101596254 101596297 -65053999 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 1360 3948 167 46 37 chrX 101596297 101596710 -65053586 + ORR1B1-int LTR MaLR 1113 1508 -1 1 1360 1229 122 19 142 chrX 101596729 101596916 -65053380 + ORR1B1 LTR MaLR 161 339 -55 1 1360 1195 41 7 0 chrX 101596916 101597061 -65053235 + B1_Mm SINE Alu 2 147 0 2 1360 1229 122 19 142 chrX 101597061 101597140 -65053156 + ORR1B1 LTR MaLR 340 394 0 1 1360 684 292 25 20 chrX 101597214 101597413 -65052883 + MLT1A0 LTR MaLR 69 268 -97 2 1360 339 228 12 25 chrX 101597390 101597471 -65052825 + MLT1A0 LTR MaLR 373 452 -15 2 1360 655 245 14 0 chrX 101598036 101598179 -65052117 + B1_Mur2 SINE Alu 5 149 0 2 1360 204 125 0 0 chrX 101598179 101598211 -65052085 + (A)n Simple_repeat Simple_repeat 1 32 0 2 1360 1178 209 118 49 chrX 101598240 101598588 -65051708 - ORR1D1 LTR MaLR -2 372 1 2 1360 324 311 147 38 chrX 101599290 101599447 -65050849 + L1M4b LINE L1 526 699 -6635 2 1360 717 235 5 76 chrX 101599457 101599655 -65050641 + B3A SINE B2 1 184 -14 2 1360 865 273 156 54 chrX 101599787 101600491 -65049805 + L1M4b LINE L1 825 1600 -5734 2 1360 187 39 55 55 chrX 101600557 101600598 -65049698 + (TTTTTG)n Simple_repeat Simple_repeat 2 44 0 2 1360 1085 57 50 0 chrX 101600598 101600738 -65049558 - B1_Mus2 SINE Alu 0 147 1 2 1360 187 39 55 55 chrX 101600738 101600751 -65049545 + (TTTTTG)n Simple_repeat Simple_repeat 2 13 0 2 1360 858 159 14 7 chrX 101600770 101600916 -65049380 - B1_Mus2 SINE Alu 0 147 1 2 1360 276 244 240 16 chrX 101600973 101601398 -65048898 + L1M4b LINE L1 1670 2189 -5145 2 1360 995 134 0 20 chrX 101601480 101601632 -65048664 + B1_Mur3 SINE Alu 1 149 0 2 1360 374 273 167 59 chrX 101601656 101601734 -65048562 + L1M4b LINE L1 2326 2401 -4933 2 1360 1107 71 14 0 chrX 101601734 101601874 -65048422 + B1_Mus2 SINE Alu 1 142 -5 2 1360 198 0 0 0 chrX 101601876 101601898 -65048398 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 2 1360 374 273 167 59 chrX 101601898 101602104 -65048192 + L1M4b LINE L1 2402 2644 -4690 2 1360 256 336 16 0 chrX 101602183 101602311 -65047985 + L1M4b LINE L1 2671 2800 -4534 2 1360 3704 156 44 18 chrX 101602321 101603294 -65047002 + L1_Mur3 LINE L1 543 1547 -4333 2 1360 528 214 119 22 chrX 101603334 101603468 -65046828 - B1_Mm SINE Alu 0 147 1 2 1360 1031 153 338 7 chrX 101603488 101603768 -65046528 - Lx6 LINE L1 -713 6747 6375 2 1360 2212 204 143 54 chrX 101603749 101604262 -65046034 + Lx6 LINE L1 6812 7376 -84 2 1360 180 0 0 0 chrX 101604262 101604282 -65046014 + (GGGA)n Simple_repeat Simple_repeat 1 20 0 2 1360 2212 204 143 54 chrX 101604282 101604363 -65045933 + Lx6 LINE L1 7377 7459 -1 2 1360 525 91 235 0 chrX 101604375 101604507 -65045789 + L1_Mur3 LINE L1 1565 1727 -4153 2 1360 528 93 0 0 chrX 101604507 101604582 -65045714 + (GAAAA)n Simple_repeat Simple_repeat 4 78 0 2 1360 884 54 130 15 chrX 101604582 101604713 -65045583 + B1_Mus2 SINE Alu 1 146 -1 2 1360 6168 133 72 35 chrX 101604716 101606084 -65044212 + L1_Mur3 LINE L1 1686 3103 -2777 2 1360 593 196 309 12 chrX 101606088 101606253 -65044043 + B3 SINE B2 3 216 0 2 1360 403 245 245 0 chrX 101606309 101606407 -65043889 + B1F2 SINE Alu 2 123 -26 2 1360 339 246 92 38 chrX 101606426 101606557 -65043739 + L1MB7 LINE L1 5772 5909 -275 2 1360 413 286 109 18 chrX 101606688 101606909 -65043387 + L1MB8 LINE L1 5897 6137 -41 2 1360 430 219 0 0 chrX 101607059 101607132 -65043164 + ID4_ SINE ID 6 78 -5 2 1360 219 272 0 19 chrX 101607390 101607465 -65042831 + MIR3 SINE MIR 107 173 -35 2 1360 338 205 75 0 chrX 101607479 101607580 -65042716 + MER3 DNA MER1_type 42 153 -56 2 1360 303 246 92 8 chrX 101607849 101607968 -65042328 + L1MA5 LINE L1 6169 6297 -3 2 1360 472 245 7 4 chrX 101608006 101608117 -65042179 + PB1D10 SINE Alu 19 116 -1 2 1360 362 149 167 21 chrX 101609390 101609486 -65040810 + MER53 DNA hAT 1 110 -83 2 1360 468 77 0 0 chrX 101610024 101610089 -65040207 + (TC)n Simple_repeat Simple_repeat 2 66 0 2 1360 533 246 15 53 chrX 101610089 101610222 -65040074 - B1_Mur1 SINE Alu -21 128 1 2 1360 271 293 19 201 chrX 101610742 101610896 -65039400 - B2_Mm2 SINE B2 -69 126 1 2 1360 1176 61 0 7 chrX 101611106 101611254 -65039042 - B1_Mus2 SINE Alu 0 147 1 2 1360 1326 300 124 39 chrX 101611371 101611985 -65038311 - Lx8 LINE L1 -3 7470 6805 2 1360 821 246 11 6 chrX 101612010 101612190 -65038106 - B3A SINE B2 -17 181 1 2 1360 845 150 13 0 chrX 101612452 101612605 -65037691 + Lx2 LINE L1 6843 6997 0 2 1360 470 298 137 39 chrX 101612694 101612928 -65037368 - MIRc SINE MIR -6 262 6 2 1360 572 325 76 5 chrX 101612971 101613181 -65037115 + L2a LINE L2 2997 3221 -205 2 1360 319 253 36 12 chrX 101613202 101613286 -65037010 + B1F1 SINE Alu 1 86 -63 2 1360 4024 223 35 81 chrX 101613403 101614416 -65035880 - Lx6 LINE L1 -1 7459 6503 2 1360 4215 44 2 0 chrX 101614416 101614918 -65035378 + RLTR1C LTR ERV1 1 503 0 2 1360 4024 223 35 81 chrX 101614918 101615036 -65035260 - Lx6 LINE L1 -958 6502 6381 2 1360 2833 62 5 5 chrX 101615127 101615514 -65034782 - MTA_Mm LTR MaLR 0 396 10 2 1360 2117 225 18 16 chrX 101615521 101616018 -65034278 - Lx6 LINE L1 -1214 6246 5749 2 1360 1015 158 35 10 chrX 101616024 101616222 -65034074 - L1_Mur3 LINE L1 -3812 2068 1866 2 1360 359 280 1 121 chrX 101616354 101616500 -65033796 + B1F SINE Alu 21 147 -2 2 1360 310 296 0 24 chrX 101616510 101616593 -65033703 + MER5A1 DNA MER1_type 23 103 -63 2 1360 754 148 39 8 chrX 101616620 101616749 -65033547 + B1_Mus2 SINE Alu 1 133 -14 2 1360 222 118 0 0 chrX 101616749 101616783 -65033513 + (GGGAGA)n Simple_repeat Simple_repeat 4 37 0 2 1360 691 162 56 56 chrX 101617379 101617523 -65032773 - B1_Mur2 SINE Alu 0 149 6 2 1360 684 203 22 15 chrX 101617563 101617698 -65032598 + B1_Mur4 SINE Alu 10 145 -5 2 1360 1280 164 5 5 chrX 101618200 101618414 -65031882 - B3 SINE B2 0 216 3 2 1360 493 302 118 18 chrX 101618869 101619098 -65031198 - MIR SINE MIR -10 252 1 2 1360 378 346 0 0 chrX 101619135 101619236 -65031060 + RSINE1 SINE B4 23 123 -42 2 1360 1402 57 11 0 chrX 101619285 101619462 -65030834 + B2_Mm1t SINE B2 1 179 -14 2 1360 225 284 164 0 chrX 101619494 101619561 -65030735 - ID SINE ID -146 78 1 2 1360 212 300 25 12 chrX 101619721 101619802 -65030494 - MIRb SINE MIR -1 267 186 2 1360 244 176 27 34 chrX 101619804 101619891 -65030405 - B1_Mus2 SINE Alu 0 149 60 2 1360 922 33 8 0 chrX 101619981 101620101 -65030195 + B1_Mm SINE Alu 27 147 0 2 1360 205 195 0 0 chrX 101620101 101620142 -65030154 + A-rich Low_complexity Low_complexity 1 41 0 2 1360 4923 125 166 52 chrX 101620143 101620520 -65029776 - Lx LINE L1 -360 6637 6295 2 1360 1242 98 6 6 chrX 101620520 101620695 -65029601 - B2_Mm1t SINE B2 -18 175 1 2 1360 4923 132 140 40 chrX 101620695 101621478 -65028818 - Lx LINE L1 -703 6294 5360 2 1360 7337 98 16 23 chrX 101621464 101622672 -65027624 - Lx LINE L1 -9 6645 5446 2 1360 1160 62 0 7 chrX 101622708 101622853 -65027443 - B1_Mus2 SINE Alu 0 147 4 2 1360 373 167 15 15 chrX 101622873 101622940 -65027356 + ID4_ SINE ID 4 70 -13 2 1360 264 300 17 0 chrX 101623028 101623088 -65027208 + PB1 SINE Alu 8 68 -59 2 1360 518 317 0 30 chrX 101623089 101623255 -65027041 + RSINE1 SINE B4 4 164 -1 2 1360 229 303 15 29 chrX 101623310 101623378 -65026918 + PB1 SINE Alu 54 120 -7 2 1360 477 244 19 29 chrX 101623577 101623693 -65026603 - PB1D10 SINE Alu -101 210 10 2 1360 228 299 103 13 chrX 101623986 101624064 -65026232 - MLT1E1A LTR MaLR -347 307 223 2 1360 1083 56 42 0 chrX 101624065 101624207 -65026089 + B1_Mus1 SINE Alu 1 148 0 2 1360 203 146 24 0 chrX 101624209 101624250 -65026046 + GA-rich Low_complexity Low_complexity 2 43 0 2 1360 944 281 13 4 chrX 101624250 101624479 -65025817 - MLT1E1A LTR MaLR -449 231 1 2 1360 760 253 106 92 chrX 101624517 101624896 -65025400 + L1MB7 LINE L1 5667 6047 -137 2 1360 1178 61 0 0 chrX 101624896 101625043 -65025253 - B1_Mus2 SINE Alu 0 147 1 2 1360 760 253 106 92 chrX 101625043 101625164 -65025132 + L1MB7 LINE L1 6048 6174 -10 2 1360 222 284 76 124 chrX 101625506 101625731 -65024565 - L3b LINE CR1 -225 257 44 2 1360 234 268 0 0 chrX 101625918 101625974 -65024322 + Lx9 LINE L1 7315 7370 -274 2 1360 600 290 110 0 chrX 101626616 101626816 -65023480 - ID_B1 SINE B4 -2 222 1 2 1360 282 256 145 12 chrX 101626895 101626978 -65023318 - B3A SINE B2 -85 113 20 2 1360 325 309 48 0 chrX 101626994 101627078 -65023218 - RSINE1 SINE B4 -75 90 3 2 1360 329 376 26 35 chrX 101627089 101627202 -65023094 - PB1D10 SINE Alu -5 112 1 2 1360 312 251 39 3 chrX 101627246 101627379 -65022917 - L1M5 LINE L1 -359 5881 5740 2 1360 228 143 0 0 chrX 101627595 101627630 -65022666 - PB1D9 SINE Alu -84 36 2 2 1360 291 323 90 8 chrX 101628708 101628842 -65021454 + MIRb SINE MIR 5 149 -119 2 1360 503 324 0 14 chrX 101629889 101630036 -65020260 + B1F SINE Alu 3 147 -2 2 1360 245 378 35 39 chrX 101630382 101630703 -65019593 - MTEb LTR MaLR -2 377 39 2 1360 668 333 47 18 chrX 101630873 101631151 -65019145 + RMER15 LTR ERVL 276 561 -14 2 1360 572 0 0 14 chrX 101631227 101631296 -65019000 + (TTC)n Simple_repeat Simple_repeat 3 70 0 2 1360 7115 64 6 1 chrX 101631296 101632229 -65018067 + L1_Mur1 LINE L1 4717 5654 -232 2 1360 458 33 17 0 chrX 101632246 101632306 -65017990 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 1360 337 256 11 0 chrX 101632309 101632399 -65017897 - Lx9 LINE L1 -221 7423 7333 2 1360 519 214 34 17 chrX 101632398 101632517 -65017779 + Lx9 LINE L1 7106 7226 -418 2 1360 526 333 103 44 chrX 101632681 101633020 -65017276 - ORR1E LTR MaLR 0 359 1 2 1360 731 201 20 20 chrX 101633021 101633168 -65017128 + B1_Mur3 SINE Alu 2 148 -1 2 1360 298 287 45 17 chrX 101633346 101633523 -65016773 + L1ME3B LINE L1 5703 5884 -356 2 1360 274 300 38 0 chrX 101633756 101633836 -65016460 - ID4 SINE ID 0 83 1 2 1360 408 273 36 0 chrX 101634636 101634746 -65015550 + PB1D9 SINE Alu 1 114 -6 2 1360 254 250 10 120 chrX 101635195 101635295 -65015001 + MT2B LTR ERVL 153 241 -343 2 1360 451 229 0 0 chrX 101635215 101635298 -65014998 + PB1D7 SINE Alu 7 89 -31 2 1360 301 289 36 0 chrX 101635352 101635435 -65014861 + PB1D7 SINE Alu 1 86 -34 2 1360 219 259 17 0 chrX 101635712 101635770 -65014526 + MIR SINE MIR 82 140 -68 2 1360 1271 328 65 19 chrX 101636591 101637129 -65013167 + MER68 LTR ERVL 1 563 0 2 1360 22 0 0 0 chrX 101637341 101637363 -65012933 + AT_rich Low_complexity Low_complexity 1 22 0 2 1360 300 336 51 8 chrX 101637542 101637659 -65012637 + MIR SINE MIR 111 232 -30 2 1360 3333 40 0 2 chrX 101637701 101638098 -65012198 + MTA_Mm LTR MaLR 1 396 0 2 1360 2996 77 18 0 chrX 101638178 101638570 -65011726 - L1_Mus1 LINE L1 0 6567 6169 2 1360 216 349 35 0 chrX 101638730 101638816 -65011480 - MER5A DNA MER1_type -1 188 100 3 1360 234 196 0 0 chrX 101638816 101638862 -65011434 + MT2A LTR ERVL 1 46 -487 3 1360 4196 158 65 0 chrX 101638865 101639563 -65010733 + MERVL_2A-int LTR ERVL 4857 5599 -162 3 1360 319 252 69 29 chrX 101639564 101639666 -65010630 + ORR1A3-int LTR MaLR 534 639 -1324 3 1360 396 74 0 0 chrX 101639666 101639720 -65010576 + MERVL_2A-int LTR ERVL 5706 5759 -2 3 1360 709 277 73 56 chrX 101639720 101640007 -65010289 + MT2B LTR ERVL 298 589 -12 2 1360 2289 116 0 17 chrX 101640014 101640366 -65009930 + ORR1B1 LTR MaLR 41 386 -8 3 1360 353 357 18 0 chrX 101640403 101640414 -65009882 + ID_B1 SINE B4 72 182 -39 3 1360 413 306 10 0 chrX 101640414 101640512 -65009784 + PB1D10 SINE Alu 3 101 -16 3 1360 491 234 16 0 chrX 101640785 101640909 -65009387 - L1MA5 LINE L1 0 6300 6175 3 1360 367 246 0 0 chrX 101640913 101640982 -65009314 - U6 snRNA snRNA -37 70 2 3 1360 204 40 0 0 chrX 101641052 101641077 -65009219 + (TA)n Simple_repeat Simple_repeat 1 25 0 3 1360 26 30 0 0 chrX 101641077 101641110 -65009186 + AT_rich Low_complexity Low_complexity 1 33 0 3 1360 216 67 0 0 chrX 101641158 101641188 -65009108 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1360 321 258 0 0 chrX 101642045 101642111 -65008185 + ID4_ SINE ID 5 70 -13 3 1360 217 270 0 0 chrX 101642626 101642689 -65007607 - MIR SINE MIR -53 209 147 3 1360 314 338 24 80 chrX 101643337 101643549 -65006747 + MIR SINE MIR 14 213 -49 3 1360 614 313 0 0 chrX 101643697 101643831 -65006465 + RSINE1 SINE B4 2 135 -30 3 1360 1648 214 133 8 chrX 101644518 101644885 -65005411 - MTC LTR MaLR -8 413 1 3 1360 283 194 79 16 chrX 101645203 101645266 -65005030 + B3A SINE B2 4 70 -128 3 1360 245 368 9 0 chrX 101645841 101645947 -65004349 - PB1D10 SINE Alu -10 107 1 3 1360 673 217 14 14 chrX 101645995 101646140 -65004156 + B1_Mur2 SINE Alu 3 147 -2 3 1360 307 316 169 0 chrX 101646170 101646306 -65003990 - RSINE1 SINE B4 -4 161 3 3 1360 423 38 0 0 chrX 101646539 101646592 -65003704 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 3 1360 462 262 9 18 chrX 101646887 101646996 -65003300 - PB1D10 SINE Alu 0 117 10 3 1360 397 313 18 114 chrX 101646917 101647083 -65003213 - ID_B1 SINE B4 -54 170 21 3 1360 180 0 0 0 chrX 101647691 101647711 -65002585 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 3 1360 424 183 172 0 chrX 101647716 101647809 -65002487 - B1_Mur2 SINE Alu -14 135 27 3 1360 230 394 31 43 chrX 101648166 101648328 -65001968 + MIR3 SINE MIR 39 198 -10 3 1360 378 188 120 40 chrX 101648575 101648675 -65001621 - B1_Mur2 SINE Alu 0 149 42 3 1360 271 220 0 48 chrX 101648739 101648801 -65001495 - PB1D9 SINE Alu -61 59 1 3 1360 187 316 12 60 chrX 101648941 101649025 -65001271 - MIRb SINE MIR -72 196 117 3 1360 3088 65 5 0 chrX 101649222 101649620 -65000676 + MTB LTR MaLR 1 400 0 3 1360 221 0 35 0 chrX 101649795 101649824 -65000472 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 3 1360 467 266 15 82 chrX 101649863 101649998 -65000298 - MLT1F2 LTR MaLR -403 157 32 3 1360 986 299 47 45 chrX 101650030 101650521 -64999775 + L1MC4a LINE L1 5799 6290 -1592 3 1360 309 226 16 0 chrX 101650642 101650704 -64999592 + ORR1D2 LTR MaLR 1 63 -307 3 1360 692 233 101 93 chrX 101650692 101650929 -64999367 + MLT1C LTR MaLR 137 375 -92 3 1360 1007 129 54 10 chrX 101650966 101651169 -64999127 - Lx7 LINE L1 0 7696 7485 3 1360 258 32 0 0 chrX 101651170 101651201 -64999095 + (TC)n Simple_repeat Simple_repeat 2 32 0 3 1360 435 19 0 0 chrX 101651201 101651252 -64999044 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1360 5724 106 20 2 chrX 101651373 101652459 -64997837 + L1Md_F LINE L1 284 1424 -4459 3 1360 3472 257 42 58 chrX 101652456 101654340 -64995956 - Lx8 LINE L1 -489 6984 5096 3 1360 1424 83 0 15 chrX 101654340 101654536 -64995760 - B2_Mm2 SINE B2 -1 194 2 3 1360 3103 212 34 32 chrX 101654536 101654582 -64995714 - Lx8 LINE L1 -752 5095 5057 3 1360 287 295 75 40 chrX 101654814 101654987 -64995309 - Lx8 LINE L1 -48 7425 7247 3 1360 816 82 0 0 chrX 101655005 101655127 -64995169 + (TTCC)n Simple_repeat Simple_repeat 3 124 0 3 1360 894 166 0 0 chrX 101655131 101655270 -64995026 - B1_Mur2 SINE Alu -5 144 6 3 1360 7885 61 1 4 chrX 101657587 101658979 -64991317 - L1Md_F2 LINE L1 0 6582 5196 3 1360 1395 71 0 0 chrX 101658958 101659142 -64991154 + L1_Mm LINE L1 4498 4681 -1202 3 1360 288 0 0 0 chrX 101659226 101659258 -64991038 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1360 507 281 48 7 chrX 101659345 101659492 -64990804 - L1MDa LINE L1 -6322 311 159 3 1360 437 258 132 0 chrX 101660176 101660335 -64989961 - L1M4 LINE L1 -3593 2553 2374 3 1360 676 261 113 8 chrX 101660488 101660754 -64989542 - L1MA4 LINE L1 -368 5932 5639 3 1360 765 252 89 34 chrX 101660754 101661292 -64989004 - L1M4b LINE L1 -3666 3668 2970 3 1360 461 224 34 17 chrX 101661691 101661868 -64988428 - RMER17C LTR ERVK -135 275 96 3 1360 301 221 63 32 chrX 101661987 101662012 -64988284 - L1M4b LINE L1 -4632 2702 2678 3 1360 237 83 0 0 chrX 101662012 101662048 -64988248 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1360 301 221 63 32 chrX 101662048 101662148 -64988148 - L1M4b LINE L1 -4657 2677 2573 3 1360 305 336 29 0 chrX 101662189 101662326 -64987970 - L1M4b LINE L1 -4859 2475 2335 3 1360 1584 196 48 7 chrX 101662327 101662636 -64987660 - ORR1D1 LTR MaLR 0 374 53 3 1360 592 240 38 112 chrX 101662743 101663012 -64987284 - L1MA4 LINE L1 -377 5923 5638 3 1360 508 276 153 4 chrX 101663011 101663343 -64986953 - L1M4b LINE L1 -5119 2215 1901 3 1360 349 287 179 14 chrX 101663355 101663567 -64986729 - L1M4b LINE L1 -5490 1844 1598 3 1360 198 0 0 0 chrX 101663576 101663598 -64986698 + (TCC)n Simple_repeat Simple_repeat 1 22 0 3 1360 352 312 42 0 chrX 101663643 101663739 -64986557 - B1F SINE Alu -49 100 1 3 1360 234 0 0 0 chrX 101663750 101663776 -64986520 + (TC)n Simple_repeat Simple_repeat 1 26 0 3 1360 889 142 0 0 chrX 101663798 101663932 -64986364 - B1_Mus2 SINE Alu -1 146 13 3 1360 240 35 0 0 chrX 101663989 101664018 -64986278 + (T)n Simple_repeat Simple_repeat 1 29 0 3 1360 1100 69 14 0 chrX 101664018 101664163 -64986133 - B1_Mus2 SINE Alu 0 147 1 3 1360 293 288 169 71 chrX 101664173 101664610 -64985686 - L1M4b LINE L1 -5735 1599 1120 3 1360 844 257 80 95 chrX 101664677 101665112 -64985184 + MER44D DNA MER2_type 6 491 -214 3 1360 890 245 14 33 chrX 101665112 101665327 -64984969 - B3 SINE B2 -5 211 1 3 1360 844 185 21 159 chrX 101665327 101665442 -64984854 + MER44D DNA MER2_type 492 593 -112 3 1360 30 45 0 0 chrX 101665763 101665807 -64984489 + AT_rich Low_complexity Low_complexity 1 44 0 3 1360 405 156 0 0 chrX 101665874 101665970 -64984326 + CT-rich Low_complexity Low_complexity 1 96 0 3 1360 383 0 21 0 chrX 101665972 101666019 -64984277 + (GA)n Simple_repeat Simple_repeat 2 49 0 3 1360 216 355 11 0 chrX 101666309 101666402 -64983894 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 3 1360 237 288 15 0 chrX 101666324 101666390 -64983906 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 1360 877 195 41 17 chrX 101666481 101666653 -64983643 - ORR1D2 LTR MaLR 0 370 195 3 1360 1474 192 138 3 chrX 101666670 101667010 -64983286 - Lx3A LINE L1 -6 6975 6590 3 1360 545 132 11 0 chrX 101667011 101667102 -64983194 - L1_Mur2 LINE L1 -6005 707 616 3 1360 524 286 10 35 chrX 101667099 101667298 -64982998 - Lx9 LINE L1 -708 6936 6743 3 1360 4016 86 10 3 chrX 101667298 101667890 -64982406 - Lx3B LINE L1 -293 6680 6085 3 1360 271 328 62 27 chrX 101667905 101668162 -64982134 - L1M4b LINE L1 -6377 957 692 3 1360 363 23 0 0 chrX 101668660 101668704 -64981592 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 3 1360 1174 37 0 0 chrX 101668705 101668841 -64981455 - B1_Mus1 SINE Alu -12 136 1 3 1360 181 311 53 26 chrX 101668947 101669023 -64981273 + L2a LINE L2 2236 2313 -1106 3 1360 462 293 108 50 chrX 101669047 101669468 -64980828 + L2a LINE L2 2684 3128 -298 3 1360 262 42 62 0 chrX 101669530 101669578 -64980718 - Lx LINE L1 -2 6652 6602 3 1360 454 293 191 86 chrX 101669658 101669983 -64980313 + ORR1E LTR MaLR 1 359 0 3 1360 276 30 0 0 chrX 101670927 101670960 -64979336 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1360 717 51 0 0 chrX 101670960 101671057 -64979239 + (GA)n Simple_repeat Simple_repeat 2 99 0 3 1360 438 288 16 31 chrX 101671608 101671737 -64978559 + B1_Mus2 SINE Alu 1 127 -20 3 1360 1015 205 11 5 chrX 101671888 101672079 -64978217 - B3 SINE B2 0 216 25 3 1360 709 271 48 112 chrX 101672077 101672434 -64977862 - MTEa LTR MaLR -45 334 1 3 1360 420 169 145 26 chrX 101673100 101673252 -64977044 + L1MA9 LINE L1 5856 6025 -287 3 1360 274 169 16 33 chrX 101673288 101673349 -64976947 + MTD LTR MaLR 13 72 -347 3 1360 534 236 0 0 chrX 101673801 101673911 -64976385 + MTD LTR MaLR 95 204 -215 3 1360 834 258 20 5 chrX 101673933 101674136 -64976160 + B3 SINE B2 4 209 -7 3 1360 906 267 18 0 chrX 101674177 101674394 -64975902 + MTD LTR MaLR 199 419 0 3 1360 341 171 36 24 chrX 101674394 101674478 -64975818 + L1MA9 LINE L1 6020 6104 -208 3 1360 517 254 49 0 chrX 101674528 101674650 -64975646 - B1F SINE Alu -10 139 12 3 1360 221 179 0 0 chrX 101674641 101674680 -64975616 + PB1D10 SINE Alu 79 117 0 3 1360 321 89 0 0 chrX 101674680 101674725 -64975571 + (TAAAA)n Simple_repeat Simple_repeat 1 45 0 3 1360 33 25 0 0 chrX 101674812 101674852 -64975444 + AT_rich Low_complexity Low_complexity 1 40 0 3 1360 294 297 40 0 chrX 101674941 101675015 -64975281 - B1F2 SINE Alu -65 84 8 3 1360 347 252 50 67 chrX 101676025 101676062 -64974234 - PB1D10 SINE Alu 0 117 88 3 1360 222 37 0 0 chrX 101676062 101676089 -64974207 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1360 347 252 50 67 chrX 101676089 101676170 -64974126 - PB1D10 SINE Alu -30 87 1 3 1360 1169 50 14 0 chrX 101676338 101676479 -64973817 + B1_Mus2 SINE Alu 1 143 -4 3 1360 247 25 24 24 chrX 101676482 101676523 -64973773 + (CAA)n Simple_repeat Simple_repeat 2 42 0 3 1360 518 291 0 0 chrX 101676919 101677029 -64973267 - PB1D10 SINE Alu -7 110 1 3 1360 225 315 34 92 chrX 101676928 101677047 -64973249 - MT2B2 LTR ERVL -327 257 146 3 1360 973 47 0 0 chrX 101677269 101677396 -64972900 + L1_Mus2 LINE L1 6440 6566 0 3 1360 1119 43 28 0 chrX 101677405 101677546 -64972750 + B1_Mus2 SINE Alu 1 145 -2 4 1360 216 0 0 0 chrX 101677546 101677570 -64972726 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1360 543 16 0 0 chrX 101677666 101677730 -64972566 + (CA)n Simple_repeat Simple_repeat 2 65 0 4 1360 675 37 0 0 chrX 101679412 101679494 -64970802 + (TTCCC)n Simple_repeat Simple_repeat 4 85 0 4 1360 301 220 142 57 chrX 101679519 101679625 -64970671 - PB1 SINE Alu -12 115 1 4 1360 308 292 10 20 chrX 101680139 101680237 -64970059 - PB1D10 SINE Alu -18 99 3 4 1360 530 231 104 27 chrX 101680607 101680829 -64969467 - L1MB8 LINE L1 -12 6166 5928 4 1360 228 303 14 57 chrX 101680886 101680956 -64969340 - B4A SINE B4 -2 290 224 4 1360 1097 269 22 18 chrX 101681021 101681248 -64969048 - B4A SINE B4 -63 229 2 4 1360 948 296 97 4 chrX 101681294 101681807 -64968489 - L1MA6 LINE L1 -79 6221 5625 4 1360 228 354 65 39 chrX 101682023 101682176 -64968120 + MIRc SINE MIR 85 241 -27 4 1360 329 321 29 43 chrX 101682283 101682423 -64967873 + B1_Mur1 SINE Alu 12 149 0 4 1360 247 271 61 29 chrX 101683651 101683765 -64966531 - MER5A DNA MER1_type -5 173 66 4 1360 279 0 0 0 chrX 101684344 101684375 -64965921 + (T)n Simple_repeat Simple_repeat 1 31 0 4 1360 384 183 43 11 chrX 101684722 101684816 -64965480 + MER53 DNA hAT 15 111 -82 4 1360 282 146 0 0 chrX 101684818 101684866 -64965430 - MER53 DNA hAT -133 60 13 4 1360 464 296 14 7 chrX 101685047 101685193 -64965103 - B1F1 SINE Alu -1 148 2 4 1360 420 194 0 0 chrX 101685298 101685370 -64964926 - PB1 SINE Alu 0 127 56 4 1360 1553 189 278 7 chrX 101685370 101685806 -64964490 - RMER15 LTR ERVL 0 575 22 4 1360 249 300 0 0 chrX 101685851 101685911 -64964385 - RMER15 LTR ERVL -515 60 1 4 1360 1684 188 32 30 chrX 101685965 101686338 -64963958 + ORR1D1 LTR MaLR 1 374 0 4 1360 474 271 146 8 chrX 101686350 101686480 -64963816 - ID_B1 SINE B4 0 224 77 4 1360 608 212 17 0 chrX 101686866 101686984 -64963312 + B1_Mur2 SINE Alu 1 120 -29 4 1360 890 85 8 0 chrX 101686999 101687128 -64963168 + (GAAA)n Simple_repeat Simple_repeat 2 131 0 4 1360 719 290 70 0 chrX 101687910 101688110 -64962186 + B3 SINE B2 3 216 0 4 1360 1331 65 0 5 chrX 101688115 101688301 -64961995 + L1Md_F2 LINE L1 6386 6570 -12 4 1360 9066 69 22 7 chrX 101688571 101689907 -64960389 - Lx3_Mus LINE L1 0 7009 5649 4 1360 423 0 0 0 chrX 101691024 101691071 -64959225 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 4 1360 216 336 50 58 chrX 101691737 101691857 -64958439 - L2b LINE L2 -1 3374 3256 4 1360 1109 216 132 140 chrX 101691925 101692389 -64957907 - Lx8 LINE L1 -2 7471 7012 4 1360 23 33 0 0 chrX 101692928 101692958 -64957338 + AT_rich Low_complexity Low_complexity 1 30 0 4 1360 319 286 0 56 chrX 101692968 101693057 -64957239 - RSINE1 SINE B4 0 165 82 4 1360 195 42 0 0 chrX 101695450 101695474 -64954822 + (TC)n Simple_repeat Simple_repeat 2 25 0 4 1360 609 289 188 0 chrX 101696189 101696428 -64953868 + B4A SINE B4 3 286 -6 4 1360 5441 115 40 20 chrX 101697758 101698398 -64951898 - Lx4A LINE L1 -507 6551 5895 4 1360 1886 49 8 50 chrX 101698398 101698657 -64951639 - L1Md_F2 LINE L1 -3 6579 6332 4 1360 5441 115 40 20 chrX 101698657 101698736 -64951560 - Lx4A LINE L1 -1164 5894 5815 4 1360 1086 34 34 0 chrX 101698736 101698883 -64951413 - L1Md_F3 LINE L1 -1 6583 6432 4 1360 5441 115 40 20 chrX 101698883 101699052 -64951244 - Lx4A LINE L1 -1244 5814 5645 4 1360 3033 115 13 20 chrX 101699052 101699504 -64950792 + Lx4A LINE L1 6609 7057 -1 4 1360 886 124 7 46 chrX 101699787 101699939 -64950357 - B1_Mur3 SINE Alu -1 148 3 4 1360 21 0 0 0 chrX 101701469 101701490 -64948806 + AT_rich Low_complexity Low_complexity 1 21 0 4 1360 338 107 0 18 chrX 101702048 101702105 -64948191 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 1360 567 0 0 0 chrX 101702105 101702167 -64948129 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 1360 236 197 28 70 chrX 101702193 101702264 -64948032 - MER50B LTR ERV1 -431 266 199 4 1360 883 144 0 14 chrX 101702555 101702696 -64947600 - B1_Mur4 SINE Alu -2 148 10 4 1360 923 159 14 0 chrX 101703171 101703316 -64946980 - B1_Mur3 SINE Alu -2 147 1 4 1360 365 158 207 0 chrX 101703459 101703541 -64946755 - PB1D9 SINE Alu -5 115 17 4 1360 236 299 45 0 chrX 101703670 101703737 -64946559 + PB1D7 SINE Alu 44 113 -7 4 1360 388 275 52 30 chrX 101703870 101704005 -64946291 - ID_B1 SINE B4 0 224 87 4 1360 271 315 75 11 chrX 101704413 101704506 -64945790 - MER5A DNA MER1_type -2 187 89 4 1360 286 221 211 31 chrX 101704506 101704767 -64945529 - L1M5 LINE L1 -3094 3052 2745 4 1360 453 284 18 6 chrX 101704826 101704989 -64945307 - L1MEf LINE L1 -3568 2751 2587 4 1360 1252 64 12 0 chrX 101705115 101705286 -64945010 - L1_Mus1 LINE L1 0 6567 6395 4 1360 328 223 71 30 chrX 101705287 101705473 -64944823 - L1MEf LINE L1 -4011 2389 2179 4 1360 404 220 267 10 chrX 101705537 101705638 -64944658 - B1_Mur2 SINE Alu -21 128 2 4 1360 216 0 0 0 chrX 101706270 101706294 -64944002 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 4 1360 755 176 0 30 chrX 101706294 101706425 -64943871 - B1_Mur3 SINE Alu -17 132 5 4 1360 335 260 21 106 chrX 101706301 101706443 -64943853 - MT2B LTR ERVL -323 278 149 4 1360 1596 243 92 28 chrX 101706895 101707535 -64942761 + L1MA6 LINE L1 5619 6299 -1 4 1360 23 0 0 0 chrX 101707535 101707558 -64942738 + AT_rich Low_complexity Low_complexity 1 23 0 4 1360 1379 113 9 19 chrX 101707600 101707816 -64942480 - Lx2 LINE L1 -9 6988 6775 4 1360 6944 113 13 1 chrX 101707816 101709101 -64941195 - Lx2 LINE L1 -354 6643 5346 4 1360 6480 92 15 7 chrX 101709100 101710846 -64939450 - L1VL4 LINE L1 -1806 1753 1 4 1360 554 41 14 0 chrX 101710909 101710982 -64939314 + (TTTC)n Simple_repeat Simple_repeat 2 75 0 4 1360 291 277 0 0 chrX 101710982 101711047 -64939249 - B1F SINE Alu -10 139 75 4 1361 704 260 34 11 chrX 101712162 101712341 -64937955 - B3A SINE B2 -15 183 1 4 1361 232 320 40 13 chrX 101712597 101712673 -64937623 - ID4 SINE ID -4 79 2 4 1361 450 297 35 91 chrX 101712922 101713152 -64937144 + ORR1E LTR MaLR 34 250 -109 4 1361 243 286 0 14 chrX 101713170 101713241 -64937055 - ID4 SINE ID -12 71 2 4 1361 2059 243 45 20 chrX 101713580 101714067 -64936229 - Tigger7 DNA MER2_type -1877 614 116 4 1361 239 361 0 0 chrX 101714087 101714148 -64936148 - ID4_ SINE ID -4 79 19 4 1361 1772 243 108 8 chrX 101714173 101714837 -64935459 - L1M4c LINE L1 -1312 5064 4334 4 1361 26 0 0 27 chrX 101714957 101714980 -64935316 + AT_rich Low_complexity Low_complexity 1 23 0 4 1361 1050 102 14 0 chrX 101714980 101715127 -64935169 + B1_Mur4 SINE Alu 2 150 0 4 1361 26 0 0 27 chrX 101715127 101715140 -64935156 + AT_rich Low_complexity Low_complexity 1 13 0 4 1361 685 239 141 27 chrX 101715142 101715327 -64934969 - B3 SINE B2 -10 206 1 4 1361 531 234 27 0 chrX 101715442 101715553 -64934743 - URR1B DNA MER1_type -111 114 1 4 1361 1084 276 51 21 chrX 101715658 101715965 -64934331 - Tigger5 DNA MER2_type -36 330 3 4 1361 2273 294 79 43 chrX 101716017 101716848 -64933448 - MER21B LTR ERV1 -2 861 1 4 1361 255 217 27 55 chrX 101716856 101716929 -64933367 - L1M4c LINE L1 -4244 2140 2070 4 1361 736 204 45 0 chrX 101716986 101717118 -64933178 - B1_Mur3 SINE Alu -5 144 7 4 1361 21 36 0 0 chrX 101717135 101717163 -64933133 + AT_rich Low_complexity Low_complexity 1 28 0 4 1361 304 259 44 95 chrX 101717280 101717438 -64932858 - MTD LTR MaLR -7 412 263 4 1361 182 107 35 35 chrX 101717469 101717527 -64932769 + GA-rich Low_complexity Low_complexity 3 60 0 4 1361 324 277 189 14 chrX 101717911 101718197 -64932099 - L1MB4 LINE L1 -1101 5646 5311 4 1361 558 245 21 14 chrX 101718200 101718341 -64931955 - Lx7 LINE L1 -295 7401 7260 4 1361 7349 68 5 0 chrX 101718358 101719926 -64930370 - L1_Mus2 LINE L1 -1 6565 4990 4 1361 212 178 22 0 chrX 101719933 101719978 -64930318 - B4 SINE B4 -245 47 2 4 1361 6450 24 12 1 chrX 101719989 101720746 -64929550 - L1Md_F3 LINE L1 -2 6582 5818 4 1361 3148 90 19 8 chrX 101720746 101721459 -64928837 - L1Md_A LINE L1 -4386 1497 775 4 1361 1083 110 0 0 chrX 101721461 101721624 -64928672 - L1_Mus2 LINE L1 -1256 4627 4465 4 1361 5116 61 49 1 chrX 101721865 101722543 -64927753 - Lx3_Mus LINE L1 0 7009 6300 4 1361 1004 95 7 52 chrX 101722569 101722724 -64927572 - B1_Mus1 SINE Alu 0 148 1 4 1361 221 367 0 71 chrX 101722740 101722825 -64927471 + ID2 SINE ID 1 79 -4 4 1361 288 248 112 26 chrX 101722884 101723000 -64927296 - L1MD LINE L1 -1848 4298 4173 4 1361 304 256 8 0 chrX 101723016 101723137 -64927159 - L1MB4 LINE L1 -3210 3531 3410 4 1361 235 294 29 0 chrX 101723250 101723318 -64926978 - ID2 SINE ID -13 70 1 4 1361 216 227 0 22 chrX 101723404 101723449 -64926847 - B1_Mus1 SINE Alu -94 54 11 4 1361 225 211 0 19 chrX 101723487 101723540 -64926756 - MLT1B LTR MaLR -243 147 96 4 1361 246 286 0 0 chrX 101723548 101723604 -64926692 - ID4 SINE ID 0 83 28 4 1361 241 283 111 0 chrX 101723620 101723719 -64926577 - MLT1B LTR MaLR -280 110 1 4 1361 859 147 0 0 chrX 101723786 101723915 -64926381 - B1_Mur3 SINE Alu 0 149 21 4 1361 207 0 0 0 chrX 101724010 101724033 -64926263 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1361 799 239 77 104 chrX 101724051 101724378 -64925918 - L1MB4 LINE L1 -5754 853 536 4 1361 1176 305 52 29 chrX 101724772 101725393 -64924903 - L1M4b LINE L1 -5653 1681 1047 4 1361 227 273 134 15 chrX 101725479 101725546 -64924750 - tRNA-Ala-GCY_ tRNA tRNA 0 75 1 4 1361 228 258 145 0 chrX 101725489 101725551 -64924745 - ID4_ SINE ID -11 72 2 4 1361 214 87 43 0 chrX 101725560 101725606 -64924690 + (TTTTTG)n Simple_repeat Simple_repeat 3 50 0 4 1361 3994 191 51 17 chrX 101725670 101726475 -64923821 - Lx9 LINE L1 -286 7358 6527 4 1361 318 321 151 26 chrX 101726703 101727055 -64923241 - L1MEc LINE L1 -5509 891 496 4 1361 276 280 83 60 chrX 101727741 101727874 -64922422 + Charlie4z DNA MER1_type 2 137 -30 5 1361 227 362 61 50 chrX 101727961 101728060 -64922236 - RMER15 LTR ERVL -113 462 363 5 1361 252 219 133 27 chrX 101728125 101728200 -64922096 - ID_B1 SINE B4 0 224 142 5 1361 441 274 0 36 chrX 101728277 101728387 -64921909 + B4 SINE B4 2 107 -185 5 1361 22 56 0 0 chrX 101728687 101728723 -64921573 + AT_rich Low_complexity Low_complexity 1 36 0 5 1361 296 234 0 0 chrX 101728754 101728818 -64921478 + PB1 SINE Alu 47 110 -17 5 1361 180 111 0 0 chrX 101728933 101728960 -64921336 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 5 1361 414 0 0 0 chrX 101728960 101729006 -64921290 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1361 346 226 24 171 chrX 101729011 101729044 -64921252 - RSINE1 SINE B4 -36 129 105 5 1361 403 36 0 0 chrX 101729044 101729099 -64921197 - L1_Mus2 LINE L1 0 6566 6512 5 1361 346 226 24 171 chrX 101729099 101729188 -64921108 - RSINE1 SINE B4 -61 104 25 5 1361 334 228 0 102 chrX 101729209 101729289 -64921007 - PB1D10 SINE Alu 0 117 42 5 1361 219 36 0 0 chrX 101729297 101729325 -64920971 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 5 1361 1156 48 0 7 chrX 101729325 101729463 -64920833 - B1_Mus1 SINE Alu -9 139 2 5 1361 334 228 0 102 chrX 101729463 101729509 -64920787 - PB1D10 SINE Alu -76 41 4 5 1361 268 259 183 26 chrX 101729646 101729761 -64920535 - B1F SINE Alu -7 142 10 5 1361 502 175 187 24 chrX 101729779 101729793 -64920503 - B1_Mus1 SINE Alu 0 148 137 5 1361 830 102 0 8 chrX 101729793 101729921 -64920375 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 5 1361 502 175 187 24 chrX 101729921 101730029 -64920267 - B1_Mus1 SINE Alu -12 136 6 5 1361 24 0 0 0 chrX 101730041 101730065 -64920231 + AT_rich Low_complexity Low_complexity 1 24 0 5 1361 680 204 147 18 chrX 101731512 101731682 -64918614 - B4A SINE B4 -86 206 15 5 1361 195 42 0 0 chrX 101731933 101731957 -64918339 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 5 1361 452 237 82 30 chrX 101735668 101735803 -64914493 - B1_Mur1 SINE Alu -5 144 3 5 1361 699 257 7 7 chrX 101736627 101736780 -64913516 + RSINE1 SINE B4 11 163 -2 5 1361 283 288 69 81 chrX 101736780 101736800 -64913496 + B3A SINE B2 10 180 -18 5 1361 373 332 84 35 chrX 101737003 101737397 -64912899 - L1ME4a LINE L1 -262 5862 5450 5 1361 31 26 0 0 chrX 101737437 101737475 -64912821 + AT_rich Low_complexity Low_complexity 1 38 0 5 1361 723 227 85 30 chrX 101737719 101737919 -64912377 - B3 SINE B2 -5 211 1 5 1361 490 250 60 0 chrX 101738131 101738247 -64912049 - B1_Mur2 SINE Alu -26 123 1 5 1361 27 29 0 0 chrX 101738381 101738415 -64911881 + AT_rich Low_complexity Low_complexity 1 34 0 5 1361 335 255 85 0 chrX 101738753 101738847 -64911449 - MER103 DNA DNA 0 166 65 5 1361 254 362 78 1 chrX 101739245 101739410 -64910886 + MIR SINE MIR 8 185 -83 5 1361 324 0 0 0 chrX 101740539 101740575 -64909721 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1361 693 0 0 0 chrX 101741505 101741582 -64908714 + (TC)n Simple_repeat Simple_repeat 2 78 0 5 1361 231 167 0 0 chrX 101742475 101742517 -64907779 + C-rich Low_complexity Low_complexity 3 44 0 5 1361 183 235 0 76 chrX 101742614 101742680 -64907616 + MIRc SINE MIR 100 163 -113 5 1361 1130 144 123 10 chrX 101742881 101743084 -64907212 + URR1A DNA MER1_type 1 226 0 5 1361 23 54 0 0 chrX 101743310 101743347 -64906949 + AT_rich Low_complexity Low_complexity 1 37 0 5 1361 366 289 41 0 chrX 101744372 101744474 -64905822 - B1F SINE Alu -3 114 7 5 1361 1178 75 0 0 chrX 101744872 101745019 -64905277 - B1_Mus1 SINE Alu 0 148 2 5 1361 2161 80 30 3 chrX 101745022 101745325 -64904971 - L1_Mus3 LINE L1 0 6638 6328 5 1361 245 373 101 31 chrX 101747459 101747686 -64902610 + L1M3c LINE L1 3 245 -5896 5 1361 2385 276 104 17 chrX 101747683 101748202 -64902094 + L1Md_F2 LINE L1 4382 4940 -940 5 1361 294 29 0 0 chrX 101748202 101748237 -64902059 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1361 4096 70 18 4 chrX 101748237 101748821 -64901475 + L1Md_F2 LINE L1 4941 5586 -297 5 1361 8058 41 1 4 chrX 101748821 101749808 -64900488 + L1Md_F2 LINE L1 5587 6570 -12 5 1361 219 329 14 14 chrX 101750013 101750087 -64900209 + ID4_ SINE ID 8 81 -2 5 1361 792 272 190 46 chrX 101750096 101750341 -64899955 + L1MA9 LINE L1 5490 5795 -517 5 1361 468 0 0 0 chrX 101750341 101750393 -64899903 + (TC)n Simple_repeat Simple_repeat 1 52 0 5 1361 281 26 26 0 chrX 101750393 101750430 -64899866 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1361 792 272 190 46 chrX 101750430 101750657 -64899639 + L1MA9 LINE L1 5796 6030 -282 5 1361 2535 80 3 0 chrX 101750888 101751214 -64899082 + ORR1A2 LTR MaLR 1 327 0 5 1361 269 220 34 0 chrX 101751216 101751275 -64899021 + ORR1B1 LTR MaLR 24 84 -310 5 1361 1144 75 0 0 chrX 101751365 101751512 -64898784 - B1_Mus1 SINE Alu 0 148 2 5 1361 843 181 0 26 chrX 101752895 101753048 -64897248 + B1_Mur4 SINE Alu 2 150 0 5 1361 263 360 19 45 chrX 101753430 101753587 -64896709 + MIR SINE MIR 14 166 -102 5 1361 27 29 0 0 chrX 101753618 101753652 -64896644 + AT_rich Low_complexity Low_complexity 1 34 0 5 1361 320 329 42 21 chrX 101753698 101753841 -64896455 + RSINE1 SINE B4 3 148 -17 5 1361 25 51 0 0 chrX 101754470 101754509 -64895787 + AT_rich Low_complexity Low_complexity 1 39 0 5 1361 502 292 110 48 chrX 101755053 101755326 -64894970 - B4A SINE B4 0 292 3 5 1361 779 327 86 25 chrX 101755330 101755822 -64894474 + MT2A LTR ERVL 62 531 -2 5 1361 297 183 0 0 chrX 101756209 101756269 -64894027 + GA-rich Low_complexity Low_complexity 1 60 0 5 1361 629 266 79 7 chrX 101756270 101756410 -64893886 - RSINE1 SINE B4 -8 157 8 5 1361 292 326 53 0 chrX 101756414 101756509 -64893787 - PB1D10 SINE Alu -13 104 5 5 1361 220 206 38 15 chrX 101756558 101756626 -64893670 - ID4 SINE ID -5 78 8 5 1361 239 91 0 0 chrX 101757667 101757700 -64892596 + ID4 SINE ID 8 40 -43 5 1361 220 156 21 43 chrX 101757700 101757714 -64892582 + ID SINE ID 8 53 -171 5 1361 276 30 0 0 chrX 101757988 101758021 -64892275 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 5 1361 258 283 8 138 chrX 101758451 101758475 -64891821 + B4 SINE B4 70 119 -173 5 1361 323 206 0 81 chrX 101758475 101758549 -64891747 + B1_Mus2 SINE Alu 1 68 -79 5 1361 258 283 8 138 chrX 101758549 101758574 -64891722 + B4 SINE B4 120 176 -116 5 1361 1100 314 84 39 chrX 101758574 101759085 -64891211 + Lx8 LINE L1 6934 7467 -6 5 1361 601 250 37 37 chrX 101760454 101760616 -64889680 - RSINE1 SINE B4 -1 164 3 5 1361 918 49 0 16 chrX 101761305 101761429 -64888867 - B1_Mus2 SINE Alu 0 147 26 5 1361 518 317 6 58 chrX 101761468 101761642 -64888654 - RSINE1 SINE B4 0 165 1 5 1361 366 23 0 0 chrX 101761647 101761690 -64888606 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 5 1361 315 0 0 0 chrX 101762004 101762039 -64888257 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1361 637 262 21 28 chrX 101762109 101762254 -64888042 - B3 SINE B2 -72 144 1 5 1361 456 349 13 5 chrX 101763907 101764090 -64886206 + MIRc SINE MIR 48 224 -44 5 1361 2130 71 31 0 chrX 101764457 101764751 -64885545 - L1_Mm LINE L1 -1971 3912 3610 5 1361 2930 65 3 13 chrX 101764751 101765138 -64885158 + L1Md_F2 LINE L1 6099 6481 -101 5 1361 716 187 14 36 chrX 101766157 101766296 -64884000 + B1_Mur3 SINE Alu 2 137 -12 5 1361 964 148 0 0 chrX 101766481 101766630 -64883666 + B1_Mur4 SINE Alu 2 150 0 5 1361 1632 273 42 40 chrX 101768293 101768962 -64881334 + L1MC3 LINE L1 6925 7594 -191 5 1361 558 227 70 0 chrX 101769145 101769317 -64880979 + L1MC3 LINE L1 7601 7784 -1 5 1361 433 276 16 57 chrX 101770108 101770231 -64880065 - RMER12 LTR ERVK -434 888 771 5 1361 210 105 0 0 chrX 101770231 101770269 -64880027 + (CAGA)n Simple_repeat Simple_repeat 1 38 0 5 1361 407 372 126 24 chrX 101770572 101770905 -64879391 + L2 LINE L2 2700 3066 -353 5 1361 854 228 192 7 chrX 101770962 101771284 -64879012 + MTD LTR MaLR 1 379 0 5 1361 471 256 33 0 chrX 101771301 101771422 -64878874 + MTD LTR MaLR 288 412 -7 5 1361 907 333 27 85 chrX 101771451 101771914 -64878382 + MLT2B3 LTR ERVL 66 501 -53 5 1361 200 35 35 0 chrX 101771914 101771943 -64878353 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 5 1361 907 333 27 85 chrX 101771943 101771961 -64878335 + MLT2B3 LTR ERVL 502 519 -35 5 1361 1940 250 84 26 chrX 101772003 101772038 -64878258 + ERVL-B4-int LTR ERVL 1 41 -5673 5 1361 1221 102 39 6 chrX 101772038 101772216 -64878080 - B2_Mm2 SINE B2 -11 184 1 5 1361 1940 250 84 26 chrX 101772216 101772788 -64877508 + ERVL-B4-int LTR ERVL 42 643 -5071 5 1361 318 232 72 130 chrX 101772779 101773002 -64877294 + ERVL-B4-int LTR ERVL 901 1110 -4604 5 1361 281 286 54 11 chrX 101773004 101773096 -64877200 + L1MA5 LINE L1 5901 5996 -304 5 1361 697 232 285 0 chrX 101773124 101773368 -64876928 - ORR1D2 LTR MaLR -6 368 55 5 1361 725 232 65 20 chrX 101773384 101773658 -64876638 + L1MA5 LINE L1 6015 6300 0 5 1361 1148 75 0 0 chrX 101773688 101773835 -64876461 + B1_Mus2 SINE Alu 1 147 0 5 1361 275 71 24 0 chrX 101773836 101773878 -64876418 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 5 1361 255 286 54 83 chrX 101774149 101774317 -64875979 + L1_Rod LINE L1 33 195 -6977 5 1361 11025 205 50 97 chrX 101774467 101776864 -64873432 + Lx9 LINE L1 1508 3901 -1946 5 1361 2861 78 24 10 chrX 101776864 101777277 -64873019 + BGLII LTR ERVK 3 421 0 5 1361 11025 205 50 97 chrX 101777277 101777684 -64872612 + Lx9 LINE L1 3902 4322 -1525 5 1361 1289 102 11 0 chrX 101777684 101777861 -64872435 + B2_Mm1t SINE B2 1 179 -14 5 1361 445 104 361 19 chrX 101777926 101778034 -64872262 + B2_Mm2 SINE B2 47 191 -4 5 1361 4887 210 50 41 chrX 101778044 101779686 -64870610 + Lx9 LINE L1 4333 6052 -1592 5 1361 492 62 0 0 chrX 101779766 101779830 -64870466 + (TA)n Simple_repeat Simple_repeat 2 65 0 5 1361 570 202 19 0 chrX 101779840 101779944 -64870352 + Lx9 LINE L1 6353 6458 -1186 5 1361 1319 217 136 0 chrX 101779938 101780261 -64870035 + Lx9 LINE L1 6582 6948 -696 5 1361 500 158 0 10 chrX 101780266 101780362 -64869934 + CT-rich Low_complexity Low_complexity 2 96 0 5 1361 546 16 0 0 chrX 101780364 101780427 -64869869 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 5 1361 618 174 126 22 chrX 101780437 101780572 -64869724 - B1_Mur4 SINE Alu 0 150 2 5 1361 4409 56 2 0 chrX 101780618 101781169 -64869127 + L1Md_F3 LINE L1 6018 6569 -15 5 1361 2010 199 40 30 chrX 101781208 101781765 -64868531 + Lx9 LINE L1 7003 7597 -47 5 1361 690 335 17 59 chrX 101781923 101782212 -64868084 - MTEb LTR MaLR -43 336 60 6 1361 407 236 112 0 chrX 101782250 101782339 -64867957 - B1_Mur1 SINE Alu -5 144 46 6 1361 1371 247 132 8 chrX 101782880 101783472 -64866824 + L1ME2z LINE L1 5690 6354 -90 6 1361 209 314 67 83 chrX 101783895 101784054 -64866242 - MIRc SINE MIR -92 176 8 6 1361 270 274 56 25 chrX 101784596 101784788 -64865508 - L1M5 LINE L1 -667 5497 5295 6 1361 400 252 195 10 chrX 101784785 101784985 -64865311 + Lx8 LINE L1 7232 7468 -5 6 1361 22 80 0 0 chrX 101785035 101785085 -64865211 + AT_rich Low_complexity Low_complexity 1 50 0 6 1361 436 255 35 71 chrX 101785175 101785344 -64864952 + L1M5 LINE L1 5539 5701 -461 6 1361 195 42 0 0 chrX 101785383 101785407 -64864889 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 1361 6293 104 2 6 chrX 101786131 101787031 -64863265 + Lx3C LINE L1 6073 6969 -7 6 1361 253 283 68 62 chrX 101787253 101787445 -64862851 - L1MB5 LINE L1 -41 6369 6177 6 1361 1147 275 66 41 chrX 101787482 101788073 -64862223 - L1MB5 LINE L1 -312 6098 5493 6 1361 1157 42 42 0 chrX 101788111 101788253 -64862043 + B1_Mus1 SINE Alu 1 148 0 6 1361 218 56 28 0 chrX 101788253 101788289 -64862007 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 6 1361 366 268 71 0 chrX 101788411 101788579 -64861717 - L1MB5 LINE L1 -3096 3286 3107 6 1361 890 284 56 56 chrX 101788584 101789013 -64861283 + Lx8 LINE L1 6892 7320 -153 6 1361 353 291 108 20 chrX 101789155 101789376 -64860920 - L1MB5 LINE L1 -3267 3115 2868 6 1361 210 71 0 0 chrX 101789376 101789404 -64860892 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 1361 353 291 108 20 chrX 101789404 101789477 -64860819 - L1MB5 LINE L1 -3515 2867 2796 6 1361 1539 236 80 4 chrX 101789499 101789991 -64860305 - Lx6 LINE L1 -24 7436 6843 6 1361 370 287 72 39 chrX 101790400 101790581 -64859715 - L1MB5 LINE L1 -3785 2597 2411 6 1361 716 224 22 0 chrX 101790588 101790722 -64859574 - B1_Mur2 SINE Alu -7 142 6 6 1361 512 261 18 0 chrX 101790770 101790881 -64859415 - PB1D7 SINE Alu -6 114 2 6 1361 325 305 63 14 chrX 101790881 101791024 -64859272 - L1MB5 LINE L1 -3959 2425 2276 6 1361 5225 91 1 3 chrX 101791089 101791849 -64858447 - L1_Mus1 LINE L1 -235 5648 4890 6 1361 6921 49 20 5 chrX 101791848 101792766 -64857530 + L1_Mus1 LINE L1 5637 6567 0 6 1361 413 229 45 27 chrX 101793179 101793291 -64857005 + PB1 SINE Alu 2 115 -12 6 1361 625 252 61 7 chrX 101793920 101794068 -64856228 - RSINE1 SINE B4 -6 159 4 6 1361 229 269 174 103 chrX 101794077 101794272 -64856024 - MIRc SINE MIR -51 217 9 6 1361 1446 274 24 3 chrX 101794974 101795354 -64854942 + Lx8 LINE L1 6910 7297 -176 6 1361 342 67 0 0 chrX 101795354 101795399 -64854897 + (TA)n Simple_repeat Simple_repeat 1 45 0 6 1361 346 339 42 12 chrX 101795585 101795752 -64854544 - L1MC LINE L1 -2070 5812 5641 6 1361 753 206 0 0 chrX 101795753 101795884 -64854412 + B1_Mus1 SINE Alu 5 135 -13 6 1361 315 0 0 0 chrX 101795889 101795924 -64854372 + (CAA)n Simple_repeat Simple_repeat 2 36 0 6 1361 230 265 0 0 chrX 101795951 101796000 -64854296 - L1MC LINE L1 -2227 5655 5607 6 1361 383 52 0 4 chrX 101796043 101796105 -64854191 - L1Md_F2 LINE L1 -424 6158 6098 6 1361 3339 52 7 0 chrX 101796105 101796527 -64853769 + L1Md_F2 LINE L1 6146 6570 -12 6 1361 999 224 101 80 chrX 101796564 101796697 -64853599 + RMER13A LTR ERVK 1 127 -733 6 1361 4641 124 31 101 chrX 101796697 101797671 -64852625 - RMER17A2 LTR ERVK 0 906 1 6 1361 999 224 101 80 chrX 101797671 101797925 -64852371 + RMER13A LTR ERVK 128 396 -464 6 1361 395 188 12 0 chrX 101798237 101798317 -64851979 - RMER17A-int LTR ERVK -644 1084 1004 6 1361 395 188 12 0 chrX 101798967 101799047 -64851249 + RMER17A-int LTR ERVK 1004 1084 -644 6 1361 1132 232 76 73 chrX 101799359 101799754 -64850542 - RMER13A LTR ERVK -464 396 1 6 1361 471 48 0 0 chrX 101799790 101799852 -64850444 + (TCTA)n Simple_repeat Simple_repeat 3 64 0 6 1361 1602 220 48 32 chrX 101799852 101800281 -64850015 - Lx9 LINE L1 -159 7485 7050 6 1361 11181 203 62 12 chrX 101801207 101801782 -64848514 + L1_Mur2 LINE L1 889 1496 -4381 6 1361 201 39 0 0 chrX 101801782 101801808 -64848488 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 1361 11181 187 61 22 chrX 101801808 101803711 -64846585 + L1_Mur2 LINE L1 1497 3474 -2403 6 1361 1193 35 14 0 chrX 101803711 101803856 -64846440 + B1_Mm SINE Alu 1 147 0 6 1361 11181 187 61 22 chrX 101803856 101804463 -64845833 + L1_Mur2 LINE L1 3475 4107 -1770 6 1361 1745 246 177 4 chrX 101804464 101805011 -64845285 + Lx6 LINE L1 6599 7240 -220 6 1361 729 269 0 0 chrX 101805586 101805727 -64844569 - B1F SINE Alu -8 141 1 6 1361 724 231 129 0 chrX 101807334 101807520 -64842776 - B3 SINE B2 -6 210 1 6 1361 738 32 0 0 chrX 101807609 101807702 -64842594 + (TC)n Simple_repeat Simple_repeat 2 94 0 6 1361 852 64 0 0 chrX 101807702 101807811 -64842485 - B1_Mus1 SINE Alu -38 110 2 6 1361 3490 142 55 14 chrX 101807980 101808614 -64841682 - RLTR17 LTR ERVK -5 687 1 6 1361 1515 264 17 31 chrX 101808636 101808992 -64841304 + MTEa LTR MaLR 9 359 -20 6 1361 195 328 86 43 chrX 101809064 101809134 -64841162 + MIRc SINE MIR 24 96 -172 6 1361 288 242 63 42 chrX 101809134 101809228 -64841068 + ID4 SINE ID 2 97 -55 6 1361 232 329 131 77 chrX 101809228 101809401 -64840895 + B4 SINE B4 1 185 -107 6 1361 682 226 104 10 chrX 101809401 101809593 -64840703 - B3 SINE B2 -5 211 2 6 1361 232 329 131 77 chrX 101809593 101809679 -64840617 + B4 SINE B4 186 274 -18 6 1361 250 238 36 0 chrX 101809807 101809891 -64840405 + (TA)n Simple_repeat Simple_repeat 2 88 0 6 1361 495 402 35 15 chrX 101810483 101810743 -64839553 - L3 LINE CR1 -6 4483 4219 6 1361 552 268 67 58 chrX 101810800 101811176 -64839120 + L1ME1 LINE L1 5306 5684 -495 6 1361 829 309 43 37 chrX 101811264 101811748 -64838548 + L1ME1 LINE L1 5683 6169 -10 6 1361 1511 231 60 70 chrX 101812714 101813232 -64837064 + RMER1B Other Other 17 536 -530 6 1361 2906 213 81 131 chrX 101813232 101814312 -64835984 + RMER1A Other Other 1 1026 -4 6 1361 239 302 0 0 chrX 101814325 101814378 -64835918 + (CACCAT)n Simple_repeat Simple_repeat 3 55 0 6 1361 399 258 105 0 chrX 101814385 101814509 -64835787 - B1F2 SINE Alu -11 138 2 6 1361 2911 57 24 7 chrX 101814560 101814969 -64835327 + BGLII LTR ERVK 1 416 -5 6 1361 459 281 17 42 chrX 101814974 101815093 -64835203 + B1F2 SINE Alu 1 116 -4 6 1361 255 333 67 0 chrX 101815105 101815180 -64835116 + ID4_ SINE ID 2 81 -2 6 1361 217 325 12 35 chrX 101815180 101815191 -64835105 + B4 SINE B4 2 85 -207 6 1361 283 269 0 0 chrX 101815206 101815273 -64835023 + ID2 SINE ID 1 67 -16 6 1361 432 0 0 0 chrX 101815345 101815393 -64834903 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1361 237 253 77 0 chrX 101815393 101815484 -64834812 - L1MA6 LINE L1 -90 6210 6113 6 1361 1208 269 59 22 chrX 101815532 101816042 -64834254 - L1MA6 LINE L1 -292 6008 5480 6 1361 1157 185 0 15 chrX 101816048 101816251 -64834045 - B3 SINE B2 -1 215 16 6 1361 283 222 90 39 chrX 101816282 101816481 -64833815 - L1M2 LINE L1 -741 5442 5227 6 1361 231 352 65 94 chrX 101816518 101816656 -64833640 + ID_B1 SINE B4 7 140 -84 6 1361 830 241 188 3 chrX 101816963 101817288 -64833008 - MLT1B LTR MaLR -2 388 4 6 1361 33770 44 5 3 chrX 101817983 101823373 -64826923 + L1Md_T LINE L1 187 5589 -297 6 1361 8966 6 0 4 chrX 101823373 101824373 -64825923 + L1Md_T LINE L1 5590 6585 0 6 1361 384 340 26 0 chrX 101824582 101824735 -64825561 + L1MD LINE L1 5144 5300 -846 6 1361 378 370 117 0 chrX 101824766 101824920 -64825376 - MER47B DNA MER2_type -174 244 73 6 1361 381 287 121 60 chrX 101825143 101825358 -64824938 - MIRb SINE MIR -30 232 5 6 1361 390 252 14 11 chrX 101825420 101825531 -64824765 - MLT1C LTR MaLR -2 465 248 6 1361 441 276 190 15 chrX 101825533 101825802 -64824494 - MLT1C LTR MaLR -146 321 6 6 1361 328 330 10 0 chrX 101826168 101826265 -64824031 - MIRc SINE MIR -133 135 38 6 1361 969 128 0 7 chrX 101826568 101826717 -64823579 + B1_Mur4 SINE Alu 1 148 -2 6 1361 899 102 16 0 chrX 101826737 101826865 -64823431 + B1_Mus2 SINE Alu 10 139 -8 6 1361 288 0 0 0 chrX 101826865 101826897 -64823399 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6 1361 230 158 0 50 chrX 101826907 101826967 -64823329 + A-rich Low_complexity Low_complexity 1 57 0 6 1361 550 227 0 0 chrX 101828179 101828276 -64822020 + RSINE1 SINE B4 11 107 -58 6 1361 617 278 77 0 chrX 101828533 101828702 -64821594 + ID_B1 SINE B4 2 183 -41 6 1361 1861 152 112 60 chrX 101828785 101828885 -64821411 + MTC LTR MaLR 1 102 -319 6 1361 1002 131 178 0 chrX 101828885 101829076 -64821220 + URR1B DNA MER1_type 1 225 0 6 1361 1861 152 112 60 chrX 101829076 101829375 -64820921 + MTC LTR MaLR 103 420 -1 6 1361 531 215 25 8 chrX 101829376 101829498 -64820798 - Tigger5 DNA MER2_type -121 2285 2162 6 1361 2373 312 98 47 chrX 101829950 101831589 -64818707 + Lx8 LINE L1 5744 7466 -7 6 1361 619 293 70 6 chrX 101831763 101831921 -64818375 + B3A SINE B2 1 168 -30 6 1361 270 0 0 0 chrX 101831926 101831956 -64818340 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1361 7005 75 35 10 chrX 101831972 101832991 -64817305 + Lx LINE L1 5607 6651 -3 6 1361 529 72 12 12 chrX 101833184 101833268 -64817028 + (TTCC)n Simple_repeat Simple_repeat 3 86 0 6 1361 785 212 43 59 chrX 101833270 101833526 -64816770 - RMER1C Other Other -19 1323 1072 6 1361 323 292 72 63 chrX 101833538 101833919 -64816377 - RMER1B Other Other -539 803 220 6 1361 1448 57 0 20 chrX 101834100 101834298 -64815998 + MTB LTR MaLR 1 194 -202 6 1361 36476 11 1 7 chrX 101834298 101839705 -64810591 + L1Md_A LINE L1 215 5586 -297 6 1361 8860 13 0 0 chrX 101839705 101840701 -64809595 + L1Md_A LINE L1 5587 6582 0 6 1361 1761 37 5 0 chrX 101840704 101840922 -64809374 + MTB LTR MaLR 182 400 0 6 1361 291 358 9 9 chrX 101840922 101841032 -64809264 - RMER1B Other Other -936 130 21 6 1361 360 43 0 0 chrX 101841440 101841486 -64808810 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1361 275 266 155 29 chrX 101841496 101841670 -64808626 + Lx7 LINE L1 7501 7696 0 6 1361 409 201 196 0 chrX 101841680 101841859 -64808437 + Charlie5 DNA MER1_type 2407 2620 -4 6 170 271 280 19 29 chrX 101842935 101843038 -64807258 + L1M4 LINE L1 683 784 -5758 6 1362 642 26 0 0 chrX 101843075 101843151 -64807145 + (TA)n Simple_repeat Simple_repeat 2 77 0 6 1362 550 208 236 19 chrX 101843188 101843345 -64806951 + RLTR18 LTR ERVK 1 191 -425 6 1362 511 296 16 68 chrX 101843615 101843865 -64806431 + L1M4 LINE L1 3935 4171 -2473 6 1362 1962 176 62 5 chrX 101843888 101844260 -64806036 + ORR1B1 LTR MaLR 1 393 -1 6 1362 537 121 0 0 chrX 101844261 101844344 -64805952 + (TCCC)n Simple_repeat Simple_repeat 3 85 0 6 1362 731 311 57 0 chrX 101844424 101844790 -64805506 + L1M4 LINE L1 4310 4696 -1945 6 1362 947 138 11 0 chrX 101844792 101844966 -64805330 + Lx2 LINE L1 6822 6997 0 6 1362 234 321 0 0 chrX 101845086 101845142 -64805154 - B4 SINE B4 0 292 237 7 1362 6100 41 1 0 chrX 101845197 101845923 -64804373 - L1_Mus1 LINE L1 0 6567 5841 7 1362 561 41 0 0 chrX 101845923 101845996 -64804300 + L1_Mus1 LINE L1 5754 5826 -741 7 1362 565 303 133 11 chrX 101845996 101846176 -64804120 - B4 SINE B4 -89 203 2 7 1362 241 131 48 16 chrX 101846213 101846275 -64804021 + L1MA4 LINE L1 4363 4426 -1714 7 1362 22057 151 42 10 chrX 101846474 101848704 -64801592 + Lx2 LINE L1 743 2994 -2892 7 1362 278 26 26 0 chrX 101848704 101848743 -64801553 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 7 1362 22057 145 41 5 chrX 101848743 101852543 -64797753 + Lx2 LINE L1 2995 6995 -2 7 1362 690 156 103 7 chrX 101852566 101852702 -64797594 + B1_Mur3 SINE Alu 1 149 0 7 1362 706 264 33 4 chrX 101852733 101852973 -64797323 + L1MA4 LINE L1 4500 4746 -1397 7 1362 6827 181 42 60 chrX 101853012 101854293 -64796003 - Lx5 LINE L1 -3 7047 5791 7 1362 2124 66 10 14 chrX 101854293 101854583 -64795713 + L1_Mus2 LINE L1 6277 6565 -1 7 1362 6827 153 9 52 chrX 101854583 101854914 -64795382 - Lx5 LINE L1 -1260 5790 5456 7 1362 3061 152 60 76 chrX 101854918 101855631 -64794665 - Lx5 LINE L1 -906 4971 4270 7 1362 1298 279 31 19 chrX 101855641 101856141 -64794155 + L1MA4 LINE L1 4852 5359 -784 7 1362 2341 181 70 16 chrX 101856141 101856640 -64793656 - RLTR11A LTR ERVK -2 526 1 7 1362 1298 290 58 27 chrX 101856640 101856867 -64793429 + L1MA4 LINE L1 5329 5572 -308 7 1362 194 128 26 0 chrX 101857956 101857995 -64792301 + (CATATA)n Simple_repeat Simple_repeat 5 44 0 7 1362 427 290 21 16 chrX 101858172 101858361 -64791935 + L1MA4 LINE L1 5591 5780 -520 7 1362 1159 68 0 0 chrX 101858361 101858507 -64791789 + B1_Mus2 SINE Alu 2 147 0 7 1362 195 129 0 0 chrX 101858507 101858538 -64791758 + (A)n Simple_repeat Simple_repeat 1 31 0 7 1362 357 24 0 0 chrX 101858558 101858600 -64791696 + (TTC)n Simple_repeat Simple_repeat 3 44 0 7 1362 414 0 0 0 chrX 101858600 101858646 -64791650 + (TC)n Simple_repeat Simple_repeat 1 46 0 7 1362 234 0 0 0 chrX 101858646 101858671 -64791625 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 1362 338 229 66 33 chrX 101858672 101858794 -64791502 + L1MA4 LINE L1 5793 5918 -382 7 1362 835 111 120 16 chrX 101859226 101859410 -64790886 - Lx9 LINE L1 -2 7642 7440 7 1362 294 193 42 76 chrX 101859407 101859525 -64790771 + L1MB5 LINE L1 5339 5452 -731 7 1362 560 297 118 19 chrX 101859565 101859990 -64790306 + L1MB5 LINE L1 5532 5998 -176 7 1362 229 140 20 0 chrX 101860007 101860057 -64790239 - RMER1C Other Other -2 1340 1290 7 1362 469 230 119 68 chrX 101860023 101860275 -64790021 - Lx8 LINE L1 0 7473 7209 7 1362 193 308 0 0 chrX 101860587 101860639 -64789657 + L2b LINE L2 3324 3375 0 7 1362 228 342 13 13 chrX 101860664 101860741 -64789555 - MIRc SINE MIR -127 141 65 7 1362 1586 214 45 10 chrX 101860758 101861159 -64789137 + Lx9 LINE L1 7065 7479 -165 7 1362 6142 83 57 1 chrX 101861179 101862085 -64788211 + L1_Mus3 LINE L1 5682 6638 0 7 1362 378 200 48 0 chrX 101862092 101862197 -64788099 + Lx9 LINE L1 7531 7640 -4 7 1362 239 350 57 8 chrX 101862345 101862469 -64787827 + MIRb SINE MIR 14 143 -125 7 1362 483 319 29 14 chrX 101862487 101862627 -64787669 + RSINE1 SINE B4 3 144 -21 7 1362 429 36 0 0 chrX 101862641 101862696 -64787600 + (CA)n Simple_repeat Simple_repeat 1 55 0 7 1362 428 339 8 0 chrX 101862802 101862926 -64787370 - PB1 SINE Alu -2 125 1 7 1362 323 330 19 37 chrX 101862940 101863047 -64787249 - MER102b DNA MER1_type -236 105 1 7 1362 188 398 0 0 chrX 101863094 101863177 -64787119 + MIR SINE MIR 39 121 -141 7 1362 363 264 236 0 chrX 101863294 101863400 -64786896 - ID_B1 SINE B4 -11 213 83 7 1362 407 252 23 132 chrX 101863410 101863584 -64786712 + MIR SINE MIR 107 261 -1 7 1362 432 0 0 0 chrX 101865207 101865255 -64785041 + (TC)n Simple_repeat Simple_repeat 2 49 0 7 1362 379 52 35 0 chrX 101865255 101865312 -64784984 + (TG)n Simple_repeat Simple_repeat 1 60 0 7 1362 228 294 100 9 chrX 101866685 101866795 -64783501 - L3 LINE CR1 -35 4454 4335 7 1362 1007 78 42 21 chrX 101866938 101867082 -64783214 + B1_Mus2 SINE Alu 1 147 0 7 1362 643 60 0 20 chrX 101867713 101867815 -64782481 + L1_Mus2 LINE L1 6461 6560 -6 7 1362 387 190 157 0 chrX 101867894 101868015 -64782281 + Tigger12 DNA MER2_type 1660 1799 -160 7 1362 405 308 73 22 chrX 101868355 101868491 -64781805 + B3A SINE B2 13 155 -43 7 1362 394 286 76 51 chrX 101868973 101869091 -64781205 + ID_B1 SINE B4 84 204 -20 7 1362 254 337 57 120 chrX 101869110 101869162 -64781134 - B3 SINE B2 -1 215 20 7 1362 646 283 0 76 chrX 101869162 101869319 -64780977 - RSINE1 SINE B4 0 165 21 7 1362 645 254 20 10 chrX 101869546 101869741 -64780555 - L1MA4 LINE L1 -376 5924 5728 7 1362 200 79 0 50 chrX 101869741 101869781 -64780515 + (TATATG)n Simple_repeat Simple_repeat 6 43 0 7 1362 852 284 49 66 chrX 101869794 101869852 -64780444 - B4 SINE B4 -2 290 233 7 1362 342 0 0 0 chrX 101869852 101869890 -64780406 + (TC)n Simple_repeat Simple_repeat 1 38 0 7 1362 852 284 49 66 chrX 101869890 101870118 -64780178 - B4 SINE B4 -60 232 10 7 1362 739 251 61 58 chrX 101870119 101870462 -64779834 - L1MA4 LINE L1 -560 5731 5388 7 1362 307 257 0 13 chrX 101870664 101870739 -64779557 - RMER15-int LTR ERVL -38 4961 4888 7 1362 837 244 78 5 chrX 101870741 101870947 -64779349 - Lx8 LINE L1 -556 6917 6697 7 1362 1339 144 7 47 chrX 101870943 101871219 -64779077 - Lx5 LINE L1 -703 6347 6083 7 1362 7904 152 21 25 chrX 101871215 101873005 -64777291 - L1_Mur3 LINE L1 -3138 2739 892 7 1362 363 214 51 0 chrX 101873276 101873393 -64776903 - L1MD LINE L1 -2462 3684 3562 7 1362 400 265 5 58 chrX 101873387 101873498 -64776798 - L1MA4 LINE L1 -755 5388 5283 7 1362 768 181 34 20 chrX 101873498 101873645 -64776651 - B1_Mur4 SINE Alu -1 149 1 7 1362 3108 65 65 0 chrX 101873651 101874067 -64776229 - L1_Mus3 LINE L1 -6 6632 6190 7 1362 400 265 5 58 chrX 101874067 101874156 -64776140 - L1MA4 LINE L1 -863 5280 5192 7 1362 183 100 0 0 chrX 101874183 101874213 -64776083 + (A)n Simple_repeat Simple_repeat 1 30 0 7 1362 746 231 32 5 chrX 101874231 101874448 -64775848 - L1MA4 LINE L1 -383 5917 5695 7 1362 1638 235 180 12 chrX 101874453 101875816 -64774480 - L1MC LINE L1 -1163 4983 3394 7 1362 1664 228 40 14 chrX 101875823 101876174 -64774122 + MTE2b LTR MaLR 20 379 0 7 1362 273 265 98 20 chrX 101876296 101876449 -64773847 - L1MC LINE L1 -2945 3201 3034 7 1362 1209 55 0 0 chrX 101876449 101876595 -64773701 - B1_Mus2 SINE Alu -1 146 1 7 1362 273 265 98 20 chrX 101876595 101876695 -64773601 - L1MC LINE L1 -3113 3033 2928 7 1362 480 281 0 10 chrX 101876781 101876885 -64773411 - PB1 SINE Alu -13 114 12 7 1362 247 301 11 88 chrX 101876820 101876911 -64773385 - ID_B1 SINE B4 -71 153 70 7 1362 351 264 15 53 chrX 101876914 101877046 -64773250 - L1MC LINE L1 -3336 2810 2684 7 1362 492 234 127 5 chrX 101877172 101877361 -64772935 - L1MA9 LINE L1 -84 6228 6017 7 1362 1178 48 7 0 chrX 101877394 101877541 -64772755 + B1_Mus1 SINE Alu 1 148 0 7 1362 292 290 30 0 chrX 101877639 101877739 -64772557 + L1MA6 LINE L1 5842 5944 -356 7 1362 742 244 161 26 chrX 101877742 101878133 -64772163 - L1MA9 LINE L1 -399 5790 5347 7 1362 806 276 0 48 chrX 101878143 101878349 -64771947 - B3A SINE B2 0 198 3 7 1362 22 56 0 0 chrX 101878403 101878439 -64771857 + AT_rich Low_complexity Low_complexity 1 36 0 7 1362 324 0 0 0 chrX 101878477 101878513 -64771783 + (T)n Simple_repeat Simple_repeat 1 36 0 7 1362 1265 34 0 0 chrX 101878513 101878660 -64771636 - B1_Mus2 SINE Alu 0 147 1 7 1362 241 183 17 0 chrX 101878664 101878724 -64771572 - L1MA9 LINE L1 -888 5252 5192 7 1362 28 48 0 0 chrX 101878728 101878770 -64771526 + AT_rich Low_complexity Low_complexity 1 42 0 7 1362 647 260 93 0 chrX 101878773 101878923 -64771373 - RSINE1 SINE B4 0 165 2 7 1362 471 261 108 28 chrX 101879114 101879402 -64770894 - L1MA9 LINE L1 -1207 4933 4623 7 1362 269 220 34 76 chrX 101879429 101879547 -64770749 - Lx8 LINE L1 -6 7467 7355 7 1362 434 177 134 10 chrX 101879553 101879650 -64770646 - ORR1D1 LTR MaLR -51 323 215 7 1362 312 273 30 0 chrX 101879806 101879872 -64770424 + RSINE1 SINE B4 82 149 -16 7 1362 414 0 0 0 chrX 101879873 101879919 -64770377 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1362 1200 283 29 55 chrX 101879956 101880479 -64769817 - Lx9 LINE L1 -213 7431 6923 7 1362 303 293 88 16 chrX 101880480 101880788 -64769508 - L1MA9 LINE L1 -1535 4611 4271 7 1362 398 266 129 0 chrX 101880821 101880945 -64769351 - B1F SINE Alu -1 148 9 7 1362 798 296 59 29 chrX 101880954 101881296 -64769000 - L1MA9 LINE L1 -1870 4270 3919 7 1362 261 98 0 0 chrX 101881296 101881337 -64768959 + (TA)n Simple_repeat Simple_repeat 2 42 0 7 1362 798 296 59 29 chrX 101881337 101881471 -64768825 - L1MA9 LINE L1 -2222 3918 3781 7 1362 321 266 13 0 chrX 101882744 101882823 -64767473 - ID4 SINE ID -2 81 2 7 1362 1505 267 70 40 chrX 101883205 101883751 -64766545 - MER68 LTR ERVL 0 563 2 7 1362 257 359 25 25 chrX 101884740 101884860 -64765436 - LTR85a LTR Gypsy? -2 700 581 7 1362 429 233 102 18 chrX 101884937 101885103 -64765193 + L1MB8 LINE L1 5994 6173 -5 7 1362 449 253 19 67 chrX 101885143 101885351 -64764945 - L1MC LINE L1 -2305 5577 5380 7 1362 207 0 0 0 chrX 101885405 101885428 -64764868 + (GTTTG)n Simple_repeat Simple_repeat 1 23 0 7 1362 277 114 0 0 chrX 101886083 101886127 -64764169 + L1MD2 LINE L1 5575 5618 -624 7 1362 283 327 79 0 chrX 101886127 101886228 -64764068 + MLT1A0 LTR MaLR 1 109 -256 7 1362 644 293 23 4 chrX 101886522 101886779 -64763517 + L1MD2 LINE L1 5613 5874 -485 7 1362 953 119 55 33 chrX 101886781 101886963 -64763333 - B2_Mm2 SINE B2 -9 186 1 7 1362 821 259 0 48 chrX 101887046 101887253 -64763043 + B3A SINE B2 1 197 -1 7 1362 25 31 0 0 chrX 101887254 101887286 -64763010 + AT_rich Low_complexity Low_complexity 1 32 0 7 1362 374 329 124 23 chrX 101887679 101887897 -64762399 - MIR SINE MIR -17 245 6 7 1362 442 389 42 9 chrX 101888374 101888587 -64761709 + MER58A DNA MER1_type 4 223 -1 7 1362 409 278 171 0 chrX 101889134 101889321 -64760975 + MIR SINE MIR 18 236 -26 7 1362 210 283 10 42 chrX 101890731 101890827 -64759469 + CT-rich Low_complexity Low_complexity 2 94 0 7 1362 694 258 49 37 chrX 101892563 101892906 -64757390 + RLTR42-int LTR ERVK 1105 1303 -4219 7 1362 221 221 0 14 chrX 101893386 101893455 -64756841 + (TATG)n Simple_repeat Simple_repeat 1 68 0 7 1362 1948 136 106 34 chrX 101893554 101893997 -64756299 + IAPLTR2_Mm LTR ERVK 1 475 0 7 1362 7347 59 2 2 chrX 101894344 101895310 -64754986 - L1Md_F2 LINE L1 -11 6571 5606 7 1362 2967 64 26 9 chrX 101895309 101895736 -64754560 + L1Md_F2 LINE L1 5023 5456 -427 7 1362 685 240 17 73 chrX 101895736 101896345 -64753951 - RLTR42-int LTR ERVK -3375 2762 1966 7 1362 332 200 34 45 chrX 101896669 101896758 -64753538 - RLTR42-int LTR ERVK -3565 1957 1870 7 1362 1252 94 22 11 chrX 101896959 101897141 -64753155 + B2_Mm1t SINE B2 2 185 -8 7 1362 1627 59 23 0 chrX 101897147 101897366 -64752930 - L1_Mm LINE L1 -283 5600 5377 7 1362 3376 112 13 7 chrX 101897364 101897901 -64752395 - Lx2 LINE L1 -654 6343 5804 7 1362 7507 44 12 1 chrX 101897896 101898912 -64751384 + L1_Mus2 LINE L1 5540 6566 0 7 1362 24 0 0 0 chrX 101898955 101898979 -64751317 + AT_rich Low_complexity Low_complexity 1 24 0 7 1362 252 213 16 0 chrX 101899109 101899170 -64751126 + RLTR19-int LTR ERVK 3186 3247 -2890 8 1362 902 233 56 128 chrX 101899536 101900175 -64750121 + RLTR19-int LTR ERVK 3530 3966 -2171 8 1362 494 229 48 35 chrX 101900435 101900580 -64749716 + RLTR19-int LTR ERVK 4228 4374 -1763 8 1362 6371 125 6 39 chrX 101900804 101901051 -64749245 - Lx LINE L1 -8 6646 6398 8 1362 2855 62 68 0 chrX 101901051 101901436 -64748860 + IAPLTR2a LTR ERVK 1 411 0 8 1362 290 54 0 0 chrX 101901438 101901475 -64748821 - tRNA-Phe-TTY tRNA tRNA 0 76 40 8 1362 2434 94 75 5 chrX 101901479 101901863 -64748433 - IAPLTR2a LTR ERVK 0 411 1 8 1362 6371 127 5 33 chrX 101901863 101902842 -64747454 - Lx LINE L1 -262 6392 5413 8 1362 684 120 0 0 chrX 101902843 101902943 -64747353 - Lx4A LINE L1 -226 6832 6733 8 1362 557 202 8 8 chrX 101902953 101903078 -64747218 + Lx4A LINE L1 6924 7048 -10 8 1362 189 0 0 0 chrX 101903081 101903102 -64747194 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 8 1362 1010 300 73 15 chrX 101903107 101903506 -64746790 + Lx8 LINE L1 6715 7136 -337 8 1362 268 182 0 29 chrX 101903892 101903960 -64746336 + L1M2a LINE L1 1958 2023 -5145 8 1362 4027 54 6 2 chrX 101904160 101904696 -64745600 + L1Md_F2 LINE L1 5049 5586 -297 8 1362 8282 41 0 3 chrX 101904696 101905694 -64744602 + L1Md_F2 LINE L1 5587 6581 -1 8 1362 2359 156 6 2 chrX 101905737 101906281 -64744015 - Lx4B LINE L1 -1061 5997 5451 8 1362 1275 60 6 6 chrX 101906292 101906461 -64743835 - B2_Mm2 SINE B2 -25 170 2 8 1362 1821 130 3 27 chrX 101906461 101906793 -64743503 - Lx4B LINE L1 -422 5455 5132 8 1362 4336 150 79 16 chrX 101906793 101907593 -64742703 + Lx4B LINE L1 6209 7058 0 8 1362 623 105 90 0 chrX 101907817 101907950 -64742346 + L1_Mus3 LINE L1 6494 6638 0 8 1362 834 263 114 37 chrX 101907971 101908558 -64741738 + L1_Rod LINE L1 1534 2168 -3712 8 1362 438 317 58 0 chrX 101908562 101908682 -64741614 + RSINE1 SINE B4 18 144 -21 8 1362 264 100 0 0 chrX 101908701 101908741 -64741555 + (CAAT)n Simple_repeat Simple_repeat 1 40 0 8 1362 905 291 53 24 chrX 101908755 101909409 -64740887 - Lx7 LINE L1 -1168 6305 5634 8 1362 1091 146 44 0 chrX 101909422 101909627 -64740669 - L1_Mur1 LINE L1 -692 5194 4981 8 1362 918 291 50 71 chrX 101909628 101910009 -64740287 - MTE2a LTR MaLR -6 373 1 8 1362 868 200 89 31 chrX 101910034 101910292 -64740004 - Lx7 LINE L1 -658 5645 5309 8 1362 574 234 34 62 chrX 101910510 101910656 -64739640 + B3A SINE B2 62 203 -13 8 1362 3773 163 93 108 chrX 101910656 101911571 -64738725 - RMER19B LTR ERVK 0 902 2 8 1362 25 31 0 0 chrX 101911609 101911641 -64738655 + AT_rich Low_complexity Low_complexity 1 32 0 8 1362 490 239 319 18 chrX 101911644 101911810 -64738486 - B3 SINE B2 0 216 1 8 1362 3186 61 5 0 chrX 101912969 101913377 -64736919 - L1Md_T LINE L1 0 6582 6173 8 1362 352 341 44 55 chrX 101914138 101914401 -64735895 - L2b LINE L2 -119 3268 3001 8 1362 7313 87 5 4 chrX 101914881 101916142 -64734154 + L1_Mus4 LINE L1 5357 6618 -18 8 1362 1569 252 56 17 chrX 101916234 101916593 -64733703 + MTE2b LTR MaLR 1 373 -6 8 1362 34074 44 0 3 chrX 101916701 101922147 -64728149 + L1Md_T LINE L1 66 5589 -297 8 1362 8341 34 0 9 chrX 101922147 101923152 -64727144 + L1Md_T LINE L1 5590 6585 0 8 1362 306 245 234 9 chrX 101923403 101923510 -64726786 - RMER15 LTR ERVL -151 424 294 8 1362 487 112 0 30 chrX 101923619 101923720 -64726576 + Lx LINE L1 6557 6654 0 8 1362 3710 64 4 31 chrX 101923844 101924358 -64725938 - L1_Mus1 LINE L1 0 6567 6068 8 1362 21 0 0 0 chrX 101924698 101924719 -64725577 + AT_rich Low_complexity Low_complexity 1 21 0 8 1362 7385 101 38 6 chrX 101925140 101926232 -64724064 + Lx3C LINE L1 5848 6973 -3 8 1362 504 0 0 0 chrX 101926525 101926581 -64723715 + (CA)n Simple_repeat Simple_repeat 2 57 0 8 1362 276 310 82 45 chrX 101927102 101927345 -64722951 + L1MDa LINE L1 14 265 -6368 8 1362 224 295 66 0 chrX 101927418 101927479 -64722817 - MIRb SINE MIR -92 176 112 8 1362 2398 85 23 20 chrX 101927732 101927993 -64722303 + L1_Mus1 LINE L1 6218 6478 -89 8 1362 2775 45 62 3 chrX 101927993 101928330 -64721966 - IAPEY2_LTR LTR ERVK 0 357 1 8 1362 2398 85 23 20 chrX 101928330 101928417 -64721879 + L1_Mus1 LINE L1 6479 6567 0 8 1362 204 179 0 0 chrX 101928429 101928455 -64721841 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 8 1362 189 0 0 0 chrX 101928455 101928476 -64721820 + (CAAAC)n Simple_repeat Simple_repeat 2 22 0 8 1362 204 179 0 0 chrX 101928476 101928488 -64721808 + (CCAA)n Simple_repeat Simple_repeat 4 15 0 8 1362 229 376 33 41 chrX 101928503 101928625 -64721671 + B4A SINE B4 3 123 -169 8 1362 256 268 0 0 chrX 101928695 101928751 -64721545 + RSINE1 SINE B4 2 57 -108 8 1362 566 28 0 14 chrX 101928832 101928905 -64721391 + (TC)n Simple_repeat Simple_repeat 1 72 0 8 1362 22 0 0 0 chrX 101928926 101928948 -64721348 + AT_rich Low_complexity Low_complexity 1 22 0 8 1362 257 191 0 0 chrX 101928973 101929015 -64721281 + RSINE1 SINE B4 82 123 -42 8 1362 310 159 14 14 chrX 101929091 101929161 -64721135 + A-rich Low_complexity Low_complexity 4 73 0 8 1362 295 339 103 9 chrX 101929162 101929278 -64721018 + L1MDa LINE L1 426 552 -6081 8 1362 678 312 58 29 chrX 101929690 101930066 -64720230 + L1MDa LINE L1 883 1269 -5364 8 1362 2578 149 98 79 chrX 101930068 101930814 -64719482 + RMER19B LTR ERVK 1 902 0 8 1362 465 224 20 20 chrX 101930829 101930975 -64719321 + L1MDa LINE L1 1301 1446 -5187 8 1362 24 32 0 0 chrX 101931241 101931272 -64719024 + AT_rich Low_complexity Low_complexity 1 31 0 8 1362 323 280 50 10 chrX 101931504 101931605 -64718691 + PB1D10 SINE Alu 2 106 -11 8 1362 933 199 15 56 chrX 101931670 101931867 -64718429 + B3A SINE B2 6 194 -4 8 1362 197 259 98 89 chrX 101932160 101932283 -64718013 - L4 LINE RTE -263 1766 1643 8 1362 446 292 88 0 chrX 101932546 101932659 -64717637 + PB1 SINE Alu 1 123 -4 8 1362 26781 107 5 1 chrX 101932665 101937558 -64712738 + L1Md_F LINE L1 392 5302 -581 8 1362 331 321 48 36 chrX 101937627 101937792 -64712504 + L1MC3 LINE L1 7484 7650 -135 8 1362 21 0 0 0 chrX 101937812 101937833 -64712463 + AT_rich Low_complexity Low_complexity 1 21 0 8 1362 290 264 39 2 chrX 101937867 101937974 -64712322 + L1MC3 LINE L1 7685 7770 -15 8 1362 7156 75 7 4 chrX 101938002 101939270 -64711026 + L1_Mus1 LINE L1 5295 6566 -1 8 1362 493 268 91 16 chrX 101939386 101939629 -64710667 + L1MDa LINE L1 1473 1733 -4900 8 1362 1893 231 44 5 chrX 101939813 101940201 -64710095 - MTD LTR MaLR -16 403 1 8 1362 2619 178 61 26 chrX 101940300 101940485 -64709811 + Lx5 LINE L1 5251 5436 -441 8 1362 5225 113 78 7 chrX 101940485 101941322 -64708974 + Lx3C LINE L1 6079 6974 -2 8 1362 2619 165 58 21 chrX 101941322 101941783 -64708513 + Lx5 LINE L1 5437 5924 -1126 8 1362 3610 14 0 0 chrX 101942306 101942728 -64707568 + MERVL-int LTR ERVL 2254 2675 -2810 8 1362 2618 227 69 110 chrX 101942742 101943688 -64706608 + Lx5 LINE L1 5926 6832 -218 8 1362 252 0 0 0 chrX 101943745 101943773 -64706523 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 8 1362 248 235 8 92 chrX 101943780 101943911 -64706385 + L1MD1 LINE L1 5318 5437 -805 8 1362 1578 288 58 3 chrX 101943954 101944591 -64705705 + L1MD1 LINE L1 5542 6213 -29 8 1362 18052 141 120 10 chrX 101947844 101953252 -64697044 + Lx LINE L1 571 6632 -22 8 1362 6307 35 0 1 chrX 101953252 101953999 -64696297 + L1Md_T LINE L1 5837 6582 0 8 1362 6146 132 14 30 chrX 101953999 101954026 -64696270 + Lx LINE L1 6633 6654 0 8 1362 207 157 0 0 chrX 101954026 101954077 -64696219 + A-rich Low_complexity Low_complexity 1 51 0 8 1362 1347 263 80 61 chrX 101954235 101954809 -64695487 - RLTR18B LTR ERVK -3 613 72 8 1362 2706 69 114 0 chrX 101955925 101956303 -64693993 - BGLII LTR ERVK 0 421 1 8 1362 1511 109 17 0 chrX 101956822 101957061 -64693235 - RLTR18-int LTR ERVK -237 5124 4882 8 1362 468 0 0 0 chrX 101957239 101957291 -64693005 + (CA)n Simple_repeat Simple_repeat 1 52 0 8 1362 2489 257 179 26 chrX 101957693 101958830 -64691466 - RMER1C Other Other -4 1338 29 8 1362 1920 182 35 46 chrX 101959498 101960189 -64690107 - RLTR18-int LTR ERVK -492 4869 4117 8 1362 21 57 0 0 chrX 101961206 101961241 -64689055 + AT_rich Low_complexity Low_complexity 1 35 0 8 1362 977 143 41 6 chrX 101961745 101961914 -64688382 - RLTR18-int LTR ERVK -1783 3578 3404 8 1362 333 188 0 0 chrX 101961921 101962001 -64688295 + T-rich Low_complexity Low_complexity 1 80 0 8 1362 3597 95 29 11 chrX 101962246 101962767 -64687529 - Lx LINE L1 -6 6648 6119 8 1362 1421 111 9 0 chrX 101962777 101963003 -64687293 - RLTR18-int LTR ERVK -2190 3171 2944 8 1362 1012 258 111 57 chrX 101963004 101963506 -64686790 - RLTR18B LTR ERVK -77 539 7 8 1362 773 102 17 17 chrX 101963571 101963691 -64686605 + PB1D9 SINE Alu 1 120 0 8 1362 210 71 0 0 chrX 101963691 101963719 -64686577 + (A)n Simple_repeat Simple_repeat 1 28 0 8 1362 1157 181 76 0 chrX 101964505 101964715 -64685581 - URR1A DNA MER1_type 0 226 1 8 1362 467 313 73 5 chrX 101965018 101965236 -64685060 + MIR SINE MIR 30 262 0 8 1362 211 255 0 0 chrX 101965414 101965461 -64684835 + GA-rich Low_complexity Low_complexity 4 50 0 8 1362 239 317 48 16 chrX 101965505 101965630 -64684666 - L1MDa LINE L1 -6486 147 19 8 1362 1882 72 4 27 chrX 101965971 101966229 -64684067 - L1_Mus1 LINE L1 0 6567 6316 8 1362 660 125 0 0 chrX 101966234 101966362 -64683934 + (TC)n Simple_repeat Simple_repeat 2 129 0 8 1362 869 262 112 40 chrX 101966420 101967169 -64683127 - L1MCa LINE L1 -2572 3749 2945 8 1362 3918 34 11 0 chrX 101967169 101967639 -64682657 - L1Md_F3 LINE L1 -15 6569 6095 8 1362 2213 138 78 6 chrX 101967671 101968028 -64682268 - MTC LTR MaLR -38 383 1 8 1362 293 220 54 54 chrX 101968034 101968207 -64682089 - L1MCa LINE L1 -3418 2903 2729 8 1362 1675 266 134 22 chrX 101968207 101969478 -64680818 - L1MCa LINE L1 -4322 2186 773 8 1362 2350 195 45 28 chrX 101969477 101970098 -64680198 - Lx2B LINE L1 0 6997 6326 8 1362 2262 106 0 3 chrX 101970101 101970413 -64679883 - ORR1A2 LTR MaLR -4 323 13 8 1362 553 229 0 35 chrX 101970413 101970558 -64679738 - Lx4B LINE L1 -727 6331 6192 8 1362 9853 134 53 9 chrX 101970558 101972229 -64678067 - MurERV4_19-int LTR ERVK -2833 2947 1195 8 1362 3048 73 0 8 chrX 101972229 101972628 -64677668 - MTA_Mm LTR MaLR 0 396 1 8 1362 9853 134 53 9 chrX 101972628 101972656 -64677640 - MurERV4_19-int LTR ERVK -4586 1194 1172 8 1362 36 0 0 0 chrX 101972662 101972698 -64677598 + AT_rich Low_complexity Low_complexity 1 36 0 8 170 21849 16 2 11 chrX 101972727 101976219 -64674077 - L1Md_A LINE L1 -2016 3867 413 8 1363 3128 64 7 7 chrX 101976227 101976635 -64673661 - L1_Mus1 LINE L1 0 6567 6160 8 1363 6720 152 31 2 chrX 101976636 101977764 -64672532 - MurERV4_19-int LTR ERVK -4617 1163 3 8 1363 689 164 0 16 chrX 101977766 101977890 -64672406 - RMER19C LTR ERVK 0 611 490 8 1363 937 133 0 0 chrX 101977890 101978040 -64672256 + L1Md_F LINE L1 231 380 -6258 8 1363 8670 112 36 8 chrX 101978038 101980199 -64670097 + L1Md_F LINE L1 244 2460 -3423 8 1363 3937 48 0 35 chrX 101980199 101980713 -64669583 + L1Md_F2 LINE L1 6073 6568 -14 8 1363 5212 108 35 3 chrX 101980721 101981492 -64668804 + L1Md_F2 LINE L1 5784 6579 -3 8 1363 1655 173 191 32 chrX 101981514 101981890 -64668406 - RMER19C LTR ERVK -175 436 1 8 1363 233 232 0 0 chrX 101981892 101981948 -64668348 + T-rich Low_complexity Low_complexity 1 56 0 8 1363 881 265 42 0 chrX 101981952 101982167 -64668129 - RMER1C Other Other -359 983 760 8 1363 264 296 167 19 chrX 101982169 101982379 -64667917 - L1MCb LINE L1 -5156 889 649 8 1363 370 381 17 29 chrX 101982880 101983053 -64667243 + MER58A DNA MER1_type 2 172 -52 9 1363 431 188 94 0 chrX 101983195 101983323 -64666973 - Lx9 LINE L1 0 7644 7505 9 1363 207 0 0 0 chrX 101983324 101983347 -64666949 + (TG)n Simple_repeat Simple_repeat 2 24 0 9 1363 566 51 13 0 chrX 101983347 101983424 -64666872 + (TA)n Simple_repeat Simple_repeat 2 80 0 9 1363 982 223 19 5 chrX 101983428 101983644 -64666652 - Lx9 LINE L1 -182 7462 7244 9 1363 412 346 0 15 chrX 101983973 101984105 -64666191 - ID_B1 SINE B4 -4 220 91 9 1363 475 191 87 0 chrX 101984113 101984228 -64666068 + MER58B DNA MER1_type 76 200 -141 9 1363 239 267 57 65 chrX 101984450 101984653 -64665643 + L1M3 LINE L1 4680 4888 -1255 9 1363 2116 70 0 0 chrX 101984750 101985061 -64665235 + L1Md_F2 LINE L1 6297 6582 0 9 1363 303 271 24 8 chrX 101985065 101985188 -64665108 + L1M5 LINE L1 4972 5096 -1050 9 1363 375 328 10 16 chrX 101985300 101985492 -64664804 + L1M5 LINE L1 5476 5666 -498 9 1363 427 296 22 15 chrX 101985493 101985630 -64664666 + MLT1A0 LTR MaLR 1 138 -227 9 1363 562 353 60 13 chrX 101985852 101986168 -64664128 - Lx8 LINE L1 -84 7389 7059 9 1363 472 282 110 41 chrX 101986445 101986663 -64663633 + MLT1A0 LTR MaLR 133 365 0 9 1363 282 263 26 0 chrX 101986672 101986786 -64663510 + L1M5 LINE L1 5679 5795 -367 9 1363 1090 239 75 4 chrX 101986799 101987195 -64663101 + L1VL2 LINE L1 226 741 -5594 9 1363 1521 93 13 4 chrX 101987195 101987432 -64662864 - L1_Mus3 LINE L1 -6 6632 6394 9 1363 953 160 29 5 chrX 101987432 101987623 -64662673 + Lx2A1 LINE L1 6057 6251 -757 9 1363 31059 67 4 0 chrX 101987622 101992618 -64657678 + L1Md_F2 LINE L1 570 5586 -297 9 1363 7954 42 10 0 chrX 101992619 101993590 -64656706 + L1Md_F2 LINE L1 5588 6568 -14 9 1363 618 39 0 0 chrX 101993596 101993673 -64656623 + (GAAA)n Simple_repeat Simple_repeat 2 78 0 9 1363 33780 36 0 0 chrX 101993673 101998971 -64651325 + L1Md_T LINE L1 195 5589 -297 9 1363 9014 6 0 0 chrX 101998971 101999988 -64650308 + L1Md_T LINE L1 5590 6585 0 9 1363 2315 155 32 17 chrX 102000000 102000406 -64649890 + Lx2A1 LINE L1 6258 6669 -339 1 1363 4531 42 0 0 chrX 102000406 102000912 -64649384 + L1Md_T LINE L1 6077 6582 0 2 1363 1954 174 42 0 chrX 102000911 102001244 -64649052 + Lx2A1 LINE L1 6656 7002 -6 1 1363 17603 98 33 9 chrX 102001270 102004233 -64646063 + L1Md_F LINE L1 549 3588 -2295 3 1363 475 243 191 62 chrX 102004233 102004474 -64645822 - RLTR10A LTR ERVK 0 411 140 4 1363 1665 161 10 7 chrX 102004515 102004791 -64645505 - RLTR45-int LTR ERVK -202 7042 6529 5 1363 430 225 90 42 chrX 102005028 102005172 -64645124 - RLTR10-int LTR ERVK -1519 468 318 4 1363 486 239 184 61 chrX 102005185 102005430 -64644866 - RLTR10A LTR ERVK -1 410 136 4 1363 15322 69 14 1 chrX 102005477 102007457 -64642839 + L1_Mm LINE L1 3583 5586 -297 6 1363 8004 78 2 1 chrX 102007457 102008452 -64641844 + L1Md_F2 LINE L1 5587 6582 0 7 1363 573 119 0 0 chrX 102010066 102010167 -64640129 + (TG)n Simple_repeat Simple_repeat 2 102 0 8 1363 1007 265 24 8 chrX 102010167 102010422 -64639874 - B4A SINE B4 -33 259 1 9 1363 211 309 12 23 chrX 102010476 102010562 -64639734 + CT-rich Low_complexity Low_complexity 1 85 0 1 1363 486 338 0 0 chrX 102010921 102011060 -64639236 + ID_B1 SINE B4 84 222 -2 1 1363 332 158 11 0 chrX 102013765 102013860 -64636436 + (CA)n Simple_repeat Simple_repeat 1 96 0 1 1363 404 111 0 12 chrX 102013875 102013957 -64636339 + (GA)n Simple_repeat Simple_repeat 2 82 0 1 1363 270 280 36 27 chrX 102014188 102014298 -64635998 - MER31A LTR ERV1 -374 111 1 1 1363 1045 263 281 35 chrX 102014757 102015072 -64635224 - MER31-int LTR ERV1 -392 4544 4151 1 1363 351 0 0 0 chrX 102015072 102015111 -64635185 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1363 1428 282 105 41 chrX 102015111 102015994 -64634302 - MER31-int LTR ERV1 -786 4150 3224 1 1363 501 295 0 13 chrX 102015994 102016145 -64634151 + B1F2 SINE Alu 1 149 0 1 1363 1428 276 79 31 chrX 102016145 102016184 -64634112 - MER31-int LTR ERV1 -1713 3223 3172 1 1363 394 276 94 9 chrX 102016184 102016290 -64634006 + PB1D10 SINE Alu 3 117 0 1 1363 1428 276 79 31 chrX 102016290 102016427 -64633869 - MER31-int LTR ERV1 -1765 3171 3026 1 1363 5997 90 32 5 chrX 102016617 102017408 -64632888 + Lx3_Mus LINE L1 6198 7009 0 1 1363 285 129 42 14 chrX 102017567 102017638 -64632658 - Lx5 LINE L1 0 7050 6978 1 1363 662 35 12 0 chrX 102017969 102018054 -64632242 + (TTTC)n Simple_repeat Simple_repeat 1 86 0 2 1363 1163 95 81 38 chrX 102018152 102018338 -64631958 - B2_Mm2 SINE B2 -1 194 1 2 1363 210 71 0 0 chrX 102018607 102018635 -64631661 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1363 27 0 0 0 chrX 102018665 102018692 -64631604 + AT_rich Low_complexity Low_complexity 1 27 0 2 1363 265 204 129 69 chrX 102018854 102018970 -64631326 - MER31-int LTR ERV1 -2395 2541 2419 1 1363 7863 76 1 4 chrX 102019042 102020752 -64629544 - L1_Mus1 LINE L1 -1 6566 4863 2 1363 357 188 58 112 chrX 102020759 102021031 -64629265 - MER34B-int LTR ERV1 -3640 2547 2275 2 1363 35379 57 3 2 chrX 102021048 102026052 -64624244 + L1Md_F3 LINE L1 620 5585 -298 2 1363 8558 43 3 3 chrX 102026053 102027044 -64623252 + L1Md_F3 LINE L1 5587 6577 -7 2 1363 21 57 0 0 chrX 102027240 102027275 -64623021 + AT_rich Low_complexity Low_complexity 1 35 0 2 1363 442 262 131 47 chrX 102027304 102027664 -64622632 + L1M2 LINE L1 3170 3559 -2584 2 1363 4990 183 41 59 chrX 102027670 102028267 -64622029 + Lx9 LINE L1 6121 6699 -945 2 1363 2559 108 39 54 chrX 102028267 102028676 -64621620 + RLTR9D LTR ERVK 1 403 0 3 1363 4990 183 41 59 chrX 102028676 102029108 -64621188 + Lx9 LINE L1 6700 7131 -513 2 1363 1957 136 21 140 chrX 102029200 102029629 -64620667 + RLTR1B LTR ERV1 135 512 0 3 1363 3713 90 16 0 chrX 102029631 102030119 -64620177 + L1_Mus3 LINE L1 6142 6637 -1 3 1363 727 200 7 7 chrX 102030163 102030299 -64619997 + Lx9 LINE L1 7127 7262 -382 2 1363 1679 52 33 0 chrX 102030295 102030506 -64619790 - L1Md_F2 LINE L1 -545 6037 5820 3 1363 1022 168 41 21 chrX 102030504 102030698 -64619598 + Lx9 LINE L1 7255 7452 -192 2 1363 207 0 0 0 chrX 102030703 102030726 -64619570 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1363 274 121 172 0 chrX 102030728 102030786 -64619510 + Lx9 LINE L1 7517 7584 -60 2 1363 7451 26 0 0 chrX 102030793 102031642 -64618654 - L1Md_T LINE L1 0 6582 5734 3 1363 407 125 0 14 chrX 102031643 102031716 -64618580 + Lx9 LINE L1 7572 7643 -1 2 1363 2918 252 102 2 chrX 102031722 102032625 -64617671 + L1M2 LINE L1 3548 4540 -1603 2 1363 533 279 58 7 chrX 102032908 102033063 -64617233 + MTEa LTR MaLR 3 165 -214 3 1363 302 227 45 0 chrX 102033083 102033149 -64617147 + MTEa LTR MaLR 181 249 -110 3 1363 293 310 171 0 chrX 102033463 102033708 -64616588 + L2 LINE L2 1377 1663 -1756 3 1363 201 133 0 0 chrX 102033804 102033834 -64616462 + (GGA)n Simple_repeat Simple_repeat 3 32 0 3 1363 278 327 19 19 chrX 102033847 102033950 -64616346 + B3A SINE B2 9 111 -87 3 1363 1797 200 33 14 chrX 102034172 102034532 -64615764 - ORR1D1 LTR MaLR -3 371 5 4 1363 1651 188 102 9 chrX 102034543 102034887 -64615409 - Lx5 LINE L1 0 7050 6675 4 1363 6981 191 62 7 chrX 102034922 102036216 -64614080 - ORR1D1-int LTR MaLR -4 1366 2 4 1363 1254 162 99 51 chrX 102036264 102036299 -64613997 - ORR1D1 LTR MaLR -88 286 230 4 1363 306 0 0 0 chrX 102036299 102036333 -64613963 + (CAGG)n Simple_repeat Simple_repeat 1 34 0 4 1363 1254 162 99 51 chrX 102036333 102036570 -64613726 - ORR1D1 LTR MaLR -145 229 2 4 1363 614 257 67 20 chrX 102036812 102037099 -64613197 - L1M3e LINE L1 -4870 2167 1859 4 1363 360 230 27 13 chrX 102039227 102039302 -64610994 + ID4_ SINE ID 5 80 -3 4 1363 674 306 110 51 chrX 102039600 102039955 -64610341 - MLT1D LTR MaLR -2 503 128 4 1363 731 213 27 2 chrX 102040353 102040518 -64609778 - B3 SINE B2 0 198 22 4 1363 965 135 6 0 chrX 102040775 102040938 -64609358 + (TTCC)n Simple_repeat Simple_repeat 2 165 0 4 1363 457 49 16 0 chrX 102040938 102040999 -64609297 - L1Md_F2 LINE L1 -18 6564 6503 4 1363 1137 168 285 7 chrX 102041233 102041503 -64608793 - MTD LTR MaLR 0 419 75 4 1363 297 0 0 0 chrX 102041505 102041538 -64608758 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 5 1363 2377 163 51 2 chrX 102041555 102041949 -64608347 - MTC LTR MaLR -8 413 1 5 1363 586 280 6 19 chrX 102042017 102042177 -64608119 - MER67B LTR ERV1 -501 160 3 5 1363 258 163 0 23 chrX 102042919 102042963 -64607333 - B1_Mus1 SINE Alu -94 54 12 5 1363 1030 114 0 0 chrX 102043245 102043394 -64606902 + ORR1B2-int LTR MaLR 1 149 -1360 5 1363 5798 173 55 20 chrX 102043386 102044548 -64605748 + ORR1B2-int LTR MaLR 306 1508 -1 5 1363 2350 155 28 3 chrX 102044551 102044907 -64605389 + ORR1B2 LTR MaLR 3 367 0 5 1363 475 276 104 0 chrX 102044964 102045086 -64605210 + RCHARR1 DNA MER1_type 3 138 -836 5 1363 924 247 5 5 chrX 102045086 102045277 -64605019 + ID_B1 SINE B4 3 193 -31 5 1363 1241 262 55 104 chrX 102045280 102045651 -64604645 + RCHARR1 DNA MER1_type 119 493 -481 5 1363 801 188 124 53 chrX 102045651 102045820 -64604476 - B3A SINE B2 -15 183 3 5 1363 1241 262 55 104 chrX 102045820 102045955 -64604341 + RCHARR1 DNA MER1_type 494 600 -374 5 1363 904 292 48 42 chrX 102045988 102046277 -64604019 - B4A SINE B4 0 292 2 5 1363 1472 214 33 44 chrX 102046282 102046428 -64603868 + RCHARR1 DNA MER1_type 589 730 -244 5 1363 754 255 62 76 chrX 102046428 102046653 -64603643 - ID_B1 SINE B4 -1 223 2 5 1363 1472 214 33 44 chrX 102046653 102046896 -64603400 + RCHARR1 DNA MER1_type 731 973 -1 5 1363 1450 240 49 18 chrX 102046899 102047226 -64603070 + Lx6 LINE L1 7046 7382 -78 6 1363 1047 227 132 4 chrX 102047545 102047788 -64602508 - B4 SINE B4 -18 274 1 6 1363 324 343 89 13 chrX 102048456 102048707 -64601589 + MIRb SINE MIR 3 264 -4 6 1363 186 254 51 152 chrX 102050195 102050274 -64600022 + L2c LINE L2 3315 3385 -2 6 1363 369 0 0 0 chrX 102050432 102050473 -64599823 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1363 263 333 112 21 chrX 102053035 102053268 -64597028 - MIRb SINE MIR -12 256 3 6 1363 180 0 0 0 chrX 102054283 102054303 -64595993 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 6 1363 265 321 83 58 chrX 102054801 102055161 -64595135 - L1ME2 LINE L1 -13 6151 5783 6 1363 464 335 65 22 chrX 102055325 102055375 -64594921 - MER90 LTR ERV1 -333 242 192 6 1363 195 42 0 0 chrX 102055375 102055399 -64594897 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 6 1363 464 335 65 22 chrX 102055399 102055580 -64594716 - MER90 LTR ERV1 -384 191 2 6 1363 591 290 273 15 chrX 102055636 102055907 -64594389 - MTEa LTR MaLR -2 377 37 7 1363 243 0 0 0 chrX 102056172 102056199 -64594097 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1363 562 188 306 27 chrX 102056596 102056846 -64593450 - RMER12B LTR ERVK 0 1404 1085 7 1363 33817 44 6 3 chrX 102056919 102062729 -64587567 + L1Md_T LINE L1 1 5589 -297 7 1363 9010 6 0 0 chrX 102062729 102063725 -64586571 + L1Md_T LINE L1 5590 6585 0 7 1363 2865 15 0 0 chrX 102063725 102064068 -64586228 + L1Md_T LINE L1 5244 5586 -297 7 1363 9048 4 0 0 chrX 102064068 102065063 -64585233 + L1Md_T LINE L1 5587 6581 -1 7 1363 333 248 35 71 chrX 102065132 102065245 -64585051 + MLT1B LTR MaLR 12 120 -270 7 1363 676 223 6 0 chrX 102065264 102065421 -64584875 - MYSERV-int LTR ERVK -52 6498 6341 7 1363 2967 172 43 19 chrX 102065427 102066077 -64584219 - MYSERV6-int LTR ERVK -228 8731 8066 7 1363 472 117 52 21 chrX 102066099 102066195 -64584101 + L1Md_T LINE L1 234 332 -6392 7 1363 4879 122 56 10 chrX 102066195 102067029 -64583267 + MurERV4_19-int LTR ERVK 1871 2743 -3037 7 1363 31592 35 1 135 chrX 102067032 102074240 -64576056 + L1Md_T LINE L1 440 6570 -68 7 1363 5972 176 37 4 chrX 102074267 102074296 -64576000 - RMER12B LTR ERVK -272 1132 1097 7 1363 1496 65 5 0 chrX 102074296 102074496 -64575800 + L1Md_A LINE L1 6381 6581 -1 8 1363 5972 176 37 4 chrX 102074496 102075561 -64574735 - RMER12B LTR ERVK -308 1096 1 7 1363 2833 166 53 6 chrX 102076192 102076702 -64573594 - RMER5 LTR ERV1 0 534 1 8 1363 28 0 0 0 chrX 102077340 102077368 -64572928 + AT_rich Low_complexity Low_complexity 1 28 0 8 1363 212 178 22 0 chrX 102077548 102077593 -64572703 - B4 SINE B4 -245 47 2 8 1363 973 273 90 8 chrX 102077793 102078083 -64572213 - L1_Rod LINE L1 -512 5791 5474 8 1363 189 0 0 0 chrX 102078083 102078104 -64572192 + (AATAG)n Simple_repeat Simple_repeat 2 22 0 8 1363 973 283 127 24 chrX 102078104 102078420 -64571876 - L1_Rod LINE L1 -830 5473 5051 8 1363 1626 261 209 22 chrX 102078421 102078538 -64571758 - Lx6 LINE L1 -2 7458 7315 8 1363 312 48 0 0 chrX 102078538 102078580 -64571716 + (GA)n Simple_repeat Simple_repeat 1 42 0 8 1363 1626 261 209 22 chrX 102078580 102079174 -64571122 - Lx6 LINE L1 -146 7314 6614 8 1363 1567 40 0 0 chrX 102079271 102079472 -64570824 + L1Md_T LINE L1 6381 6581 -1 8 1363 422 163 0 0 chrX 102079485 102079571 -64570725 + L1M2 LINE L1 5115 5200 -943 8 1363 1375 258 69 19 chrX 102079571 102079842 -64570454 - Lx6 LINE L1 -657 6393 6078 8 1363 660 87 0 0 chrX 102079842 102079934 -64570362 + (TC)n Simple_repeat Simple_repeat 1 92 0 9 1363 1375 244 61 27 chrX 102079934 102080168 -64570128 - Lx6 LINE L1 -1383 6077 5847 8 1363 1875 183 86 24 chrX 102080168 102080598 -64569698 - RMER6C LTR ERVK 0 756 332 9 1363 6113 104 32 0 chrX 102080598 102081548 -64568748 + Lx4A LINE L1 5589 6568 -490 9 1363 234 91 0 0 chrX 102081621 102081654 -64568642 + (GGGA)n Simple_repeat Simple_repeat 3 35 0 9 1363 204 40 0 0 chrX 102081880 102081905 -64568391 + (CAAAG)n Simple_repeat Simple_repeat 4 28 0 9 1363 297 0 0 0 chrX 102082110 102082143 -64568153 + (TG)n Simple_repeat Simple_repeat 1 33 0 9 1363 2004 150 133 35 chrX 102082252 102082681 -64567615 + Lx4A LINE L1 6584 7054 -4 9 1363 2053 119 89 24 chrX 102082688 102082747 -64567549 - RMER6C LTR ERVK -296 394 339 9 1363 3632 70 13 38 chrX 102082747 102083268 -64567028 - L1Md_F2 LINE L1 -1 6581 6074 9 1363 2053 119 89 24 chrX 102083268 102083578 -64566718 - RMER6C LTR ERVK -352 338 2 9 1363 2843 165 15 73 chrX 102083578 102084184 -64566112 - Lx6 LINE L1 -31 5849 5282 8 1363 3185 31 37 3 chrX 102084184 102084567 -64565729 + MTA_Mm LTR MaLR 1 396 0 9 1363 2843 165 15 73 chrX 102084567 102084627 -64565669 - Lx6 LINE L1 -599 5281 5222 8 1363 348 239 70 35 chrX 102085721 102085864 -64564432 - RLTR42-int LTR ERVK -1118 4404 4257 9 1363 2272 42 0 23 chrX 102086021 102086512 -64563784 - L1Md_Gf LINE L1 -4442 1444 857 9 1363 21 0 0 0 chrX 102086524 102086545 -64563751 + AT_rich Low_complexity Low_complexity 1 21 0 1 1363 268 271 58 17 chrX 102086725 102086845 -64563451 - RLTR42-int LTR ERVK -1283 4239 4115 9 1363 401 188 0 0 chrX 102086927 102086996 -64563300 - RLTR42-int LTR ERVK -1431 4091 4023 9 1363 7097 177 29 2 chrX 102087028 102088776 -64561520 - Lx5 LINE L1 -8 7042 5237 1 1363 456 208 19 9 chrX 102088796 102088903 -64561393 - Lx5 LINE L1 -8 7042 6935 1 1363 252 59 39 19 chrX 102089428 102089480 -64560816 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 1363 451 272 70 53 chrX 102089552 102089723 -64560573 + RLTR42-int LTR ERVK 1622 1795 -3727 1 1363 3545 144 58 12 chrX 102089878 102090668 -64559628 - RMER6C LTR ERVK -4 716 1 1 1363 467 274 0 0 chrX 102090669 102090786 -64559510 - Lx7 LINE L1 -462 7234 7118 1 1363 2029 181 37 0 chrX 102090821 102091175 -64559121 - ORR1B2 LTR MaLR 0 367 1 1 1363 5337 84 31 0 chrX 102091234 102091949 -64558347 - Lx LINE L1 -7 6647 5911 1 1363 189 171 0 0 chrX 102092055 102092090 -64558206 + (TTG)n Simple_repeat Simple_repeat 1 35 0 1 1363 598 254 8 0 chrX 102092102 102092232 -64558064 - B1_Mur2 SINE Alu -6 143 13 1 1363 326 216 13 13 chrX 102092232 102092307 -64557989 + HAL1-3A_ME LINE L1 1953 2027 -831 1 1363 393 22 0 0 chrX 102092376 102092422 -64557874 + (TTTA)n Simple_repeat Simple_repeat 4 49 0 1 1363 444 350 0 8 chrX 102092791 102092915 -64557381 - B3A SINE B2 -74 124 2 1 1363 420 20 0 0 chrX 102093132 102093181 -64557115 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1363 3217 145 18 38 chrX 102093181 102093739 -64556557 - RLTR20B2 LTR ERVK -9 551 5 1 1363 495 0 0 0 chrX 102093741 102093796 -64556500 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1363 4078 175 67 71 chrX 102093860 102094751 -64555545 + RMER19B LTR ERVK 1 888 -14 1 1363 394 229 31 0 chrX 102094904 102095000 -64555296 + Lx9 LINE L1 6903 7001 -643 1 1363 1379 256 22 68 chrX 102094996 102095410 -64554886 - Lx9 LINE L1 -684 6960 6566 1 1363 263 314 39 0 chrX 102095418 102095520 -64554776 + L1MEc LINE L1 158 263 -6137 1 1363 433 288 114 31 chrX 102095597 102095887 -64554409 + L1MEc LINE L1 448 761 -5639 1 1363 287 304 29 29 chrX 102096268 102096373 -64553923 + L1M3de LINE L1 1198 1302 -5351 1 1363 4872 114 19 5 chrX 102096439 102097215 -64553081 - L1_Mm LINE L1 -80 5803 5017 1 1363 1224 106 17 0 chrX 102097216 102097395 -64552901 - ORR1A2 LTR MaLR -50 277 96 1 1363 21 0 0 0 chrX 102097398 102097419 -64552877 + AT_rich Low_complexity Low_complexity 1 21 0 1 1363 306 261 15 30 chrX 102097558 102097625 -64552671 + B1F1 SINE Alu 13 78 -49 1 1363 646 118 59 0 chrX 102097645 102097747 -64552549 - ORR1A4 LTR MaLR -221 108 1 1 1363 1293 189 62 0 chrX 102097751 102098011 -64552285 - Lx6 LINE L1 -815 6645 6370 1 1363 1156 307 61 9 chrX 102098012 102098472 -64551824 - Lx9 LINE L1 -752 6892 6409 1 1363 186 71 0 0 chrX 102098492 102098520 -64551776 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1 1363 380 67 17 0 chrX 102098520 102098580 -64551716 - Lx4A LINE L1 -7 7051 6991 1 1363 267 170 71 41 chrX 102099052 102099150 -64551146 - L1M3de LINE L1 -4804 1849 1749 1 1363 7238 107 8 42 chrX 102099260 102100689 -64549607 - L1Md_F2 LINE L1 -1 6581 5279 1 1363 1182 97 17 0 chrX 102100689 102100865 -64549431 - L1Md_F2 LINE L1 0 6582 6404 1 1363 4695 83 3 1 chrX 102100865 102101541 -64548755 - L1Md_F2 LINE L1 -600 5283 4607 1 1363 3178 89 3 18 chrX 102101553 102102519 -64547777 - L1Md_F2 LINE L1 -4218 1665 715 1 1363 272 122 0 0 chrX 102102510 102102551 -64547745 - L1VL1 LINE L1 -6302 120 80 1 1363 23 0 0 0 chrX 102102551 102102574 -64547722 + AT_rich Low_complexity Low_complexity 1 23 0 1 1363 1133 98 6 0 chrX 102103133 102103297 -64546999 + L1_Mus1 LINE L1 6401 6565 -2 1 1363 1001 55 0 0 chrX 102103459 102103587 -64546709 + L1_Mm LINE L1 5390 5517 -366 1 1363 5650 135 25 3 chrX 102103591 102104532 -64545764 + Lx LINE L1 5688 6649 -5 1 1363 390 91 0 0 chrX 102104532 102104587 -64545709 + ORR1A3 LTR MaLR 272 326 0 1 170 2874 190 93 9 chrX 102104594 102105177 -64545119 + Lx6 LINE L1 6653 7284 -176 1 1364 275 325 44 0 chrX 102105186 102105300 -64544996 + MER57F LTR ERV1 188 306 -130 1 1364 258 231 15 0 chrX 102105315 102105380 -64544916 + MER57F LTR ERV1 321 386 -25 1 1364 1576 265 85 30 chrX 102105394 102105934 -64544362 + Lx9 LINE L1 6901 7470 -174 1 1364 261 325 25 0 chrX 102105967 102106087 -64544209 + L1M4c LINE L1 1671 1793 -4591 1 1364 7510 12 0 0 chrX 102106090 102106931 -64543365 + L1Md_A LINE L1 5742 6582 0 1 1364 2385 147 5 5 chrX 102107135 102107518 -64542778 + Lx3B LINE L1 6587 6969 -4 1 1364 24 0 0 0 chrX 102107533 102107557 -64542739 + AT_rich Low_complexity Low_complexity 1 24 0 1 1364 1000 280 18 58 chrX 102107638 102108089 -64542207 + L1M4c LINE L1 3486 3918 -2458 1 1364 1778 191 61 14 chrX 102108099 102108460 -64541836 + Lx6 LINE L1 6808 7185 -275 1 1364 550 63 0 0 chrX 102109365 102109444 -64540852 - L1_Mus2 LINE L1 0 6566 6488 1 1364 1142 303 78 19 chrX 102109739 102110530 -64539766 + L1_Mur3 LINE L1 4351 5188 -692 1 1364 200 208 0 0 chrX 102110557 102110605 -64539691 + A-rich Low_complexity Low_complexity 3 50 0 1 1364 1936 199 68 7 chrX 102110675 102111093 -64539203 - Lx6 LINE L1 -108 7588 6890 1 1364 273 183 0 0 chrX 102111114 102111174 -64539122 + CT-rich Low_complexity Low_complexity 2 61 0 1 1364 1721 199 20 6 chrX 102111199 102111548 -64538748 - Lx6 LINE L1 -573 6887 6534 1 1364 5141 81 4 11 chrX 102111564 102112163 -64538133 - Lx3_Mus LINE L1 0 7009 6415 1 1364 5401 85 53 14 chrX 102112163 102112941 -64537355 - RLTR13C2 LTR ERVK 0 808 1 1 1364 5141 81 4 11 chrX 102112941 102113043 -64537253 - Lx3_Mus LINE L1 -595 6414 6313 1 1364 2385 77 104 17 chrX 102113043 102113411 -64536885 + Lx3_Mus LINE L1 5772 6180 -829 1 1364 4281 67 30 52 chrX 102113411 102114011 -64536285 + LTRIS_Mus LTR ERV1 1 587 0 1 1364 2385 77 104 17 chrX 102114011 102114054 -64536242 + Lx3_Mus LINE L1 6181 6219 -790 1 1364 4981 64 8 0 chrX 102114054 102114692 -64535604 + L1_Mus2 LINE L1 5923 6565 -1 1 1364 363 276 96 15 chrX 102114778 102114914 -64535382 + MT2B LTR ERVL 13 159 -374 1 1364 2615 104 24 19 chrX 102114965 102115378 -64534918 + RLTR9F LTR ERVK 1 415 0 1 1364 492 241 38 128 chrX 102115380 102115723 -64534573 + ETnERV2-int LTR ERVK 3 314 -3000 1 1364 423 0 0 0 chrX 102115723 102115770 -64534526 + (TAAAA)n Simple_repeat Simple_repeat 1 47 0 1 1364 3624 114 84 55 chrX 102115770 102116096 -64534200 + ETnERV2-int LTR ERVK 1073 1409 -5997 1 1364 1226 21 14 0 chrX 102116096 102116241 -64534055 - B1_Mm SINE Alu 0 147 1 1 1364 3624 114 84 55 chrX 102116241 102116647 -64533649 + ETnERV2-int LTR ERVK 1410 1829 -5577 1 1364 7778 36 8 0 chrX 102116660 102117739 -64532557 - L1Md_F2 LINE L1 -19 6563 5478 1 1364 1718 83 7 22 chrX 102117739 102118011 -64532285 + ETnERV2-int LTR ERVK 1818 2085 -5321 1 1364 8697 142 34 20 chrX 102118147 102120415 -64529881 + ETnERV2-int LTR ERVK 1653 5945 -1461 1 1364 347 138 15 0 chrX 102120428 102120493 -64529803 + ETnERV2-int LTR ERVK 6357 6422 -984 1 1364 381 127 28 14 chrX 102120708 102120780 -64529516 + ETnERV2-int LTR ERVK 7331 7403 -3 1 1364 2643 114 17 5 chrX 102120781 102121188 -64529108 + RLTR9F LTR ERVK 1 412 -3 1 1364 1106 204 108 25 chrX 102121189 102121475 -64528821 + MT2B LTR ERVL 292 601 0 1 1364 333 216 97 18 chrX 102121487 102121600 -64528696 + L1M3 LINE L1 3826 3947 -2196 1 1364 414 216 80 0 chrX 102121661 102121786 -64528510 + L1M3 LINE L1 4770 4904 -1236 1 1364 550 291 54 7 chrX 102121816 102121965 -64528331 - B3A SINE B2 -42 156 1 1 1364 256 277 0 0 chrX 102122001 102122048 -64528248 - RSINE1 SINE B4 -11 154 108 1 1364 2365 211 70 4 chrX 102122069 102122601 -64527695 - Lx5 LINE L1 -11 7039 6473 1 1364 1181 304 46 19 chrX 102122905 102123274 -64527022 - MTD LTR MaLR -16 403 25 1 1364 225 167 0 40 chrX 102123289 102123339 -64526957 + L1M3 LINE L1 5202 5249 -897 1 1364 3687 117 5 21 chrX 102123350 102123916 -64526380 - RLTR31B_Mm LTR ERVK 0 557 1 1 1364 794 288 117 39 chrX 102123956 102124658 -64525638 + L1MB1 LINE L1 5396 6152 -37 1 1364 313 262 136 15 chrX 102124670 102124802 -64525494 + L1MEc LINE L1 765 912 -5488 1 1364 539 222 289 27 chrX 102125096 102125470 -64524826 + Lx9 LINE L1 7171 7642 -2 1 1364 352 229 154 35 chrX 102125632 102125917 -64524379 + L1MEc LINE L1 1241 1559 -4841 1 1364 348 235 122 2 chrX 102126109 102126205 -64524091 + ID4 SINE ID 1 107 -45 1 1364 355 336 77 73 chrX 102126571 102126831 -64523465 + L1MCc LINE L1 992 1252 -5170 1 1364 743 237 75 17 chrX 102126853 102126979 -64523317 + L1MCc LINE L1 1154 1278 -5145 1 1364 444 19 0 0 chrX 102126979 102127032 -64523264 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 1364 743 237 75 17 chrX 102127032 102127197 -64523099 + L1MCc LINE L1 1279 1462 -4961 1 1364 674 273 60 25 chrX 102127204 102127403 -64522893 + MER20 DNA MER1_type 4 209 -10 1 1364 432 299 134 34 chrX 102127664 102127963 -64522333 + L1MCc LINE L1 1777 2084 -4953 1 1364 874 274 17 13 chrX 102127989 102128224 -64522072 + MER47A DNA MER2_type 95 330 -36 1 1364 764 298 59 76 chrX 102128224 102128591 -64521705 - ORR1E LTR MaLR 0 421 3 1 1364 981 240 92 19 chrX 102128843 102129323 -64520973 + L1MCc LINE L1 3425 3939 -3002 1 1364 3733 145 17 8 chrX 102129315 102129976 -64520320 - L1_Mur3 LINE L1 -1506 4374 3708 1 1364 1871 177 76 23 chrX 102129993 102130387 -64519909 - Lx5 LINE L1 -1 7049 6635 1 1364 2183 109 16 0 chrX 102130629 102130941 -64519355 - ORR1A2 LTR MaLR 0 327 11 1 1364 6406 98 8 3 chrX 102130951 102131858 -64518438 - ORR1A2-int LTR MaLR 0 1963 1053 1 1364 2475 161 16 8 chrX 102131858 102132353 -64517943 - L1_Mur2 LINE L1 -2040 3840 3342 1 1364 7150 165 41 30 chrX 102132356 102133982 -64516314 - L1_Mur2 LINE L1 -2811 3066 1424 1 1364 2010 250 12 18 chrX 102134157 102134756 -64515540 + L1_Mur3 LINE L1 3449 4043 -1837 1 1364 257 308 62 4 chrX 102134826 102135062 -64515234 + L1MCc LINE L1 4221 4477 -2464 1 1364 3876 152 64 7 chrX 102135284 102136039 -64514257 + Lx9 LINE L1 6846 7643 -1 1 1364 7813 122 18 9 chrX 102136188 102138414 -64511882 + L1_Mus4 LINE L1 4384 6632 -4 1 1364 445 168 74 0 chrX 102138446 102138541 -64511755 + MTD LTR MaLR 305 406 -13 1 1364 621 133 57 32 chrX 102139163 102139287 -64511009 + Lx9 LINE L1 6965 7091 -553 1 1364 1098 107 39 6 chrX 102139296 102139474 -64510822 - Lx2 LINE L1 -412 6585 6402 1 1364 587 316 149 49 chrX 102139474 102140204 -64510092 - L1M3 LINE L1 -1725 4415 3613 1 1364 954 244 108 10 chrX 102140220 102140610 -64509686 + L1MCc LINE L1 4958 5385 -1556 1 1364 655 310 6 6 chrX 102140612 102140784 -64509512 - ID_B1 SINE B4 -52 172 1 1 1364 374 276 103 103 chrX 102140800 102141119 -64509177 + L1M2 LINE L1 3425 3743 -2400 1 1364 331 296 52 27 chrX 102141124 102141304 -64508992 - L1M5 LINE L1 -945 5201 5016 1 1364 559 303 64 14 chrX 102141373 102141821 -64508475 - L1MC LINE L1 -1234 4912 4439 1 1364 307 347 75 15 chrX 102141821 102142020 -64508276 - L1MC LINE L1 -1847 4299 4089 1 1364 524 252 31 39 chrX 102142021 102142149 -64508147 - MTD LTR MaLR -209 210 84 1 1364 4186 121 14 60 chrX 102142264 102143032 -64507264 - Lx2A LINE L1 -484 6524 5792 1 1364 9359 146 26 3 chrX 102143676 102145342 -64504954 - Lx2A LINE L1 -75 5808 4104 1 1364 297 0 0 0 chrX 102145344 102145377 -64504919 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 1364 342 0 0 0 chrX 102145377 102145414 -64504882 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1364 432 55 0 0 chrX 102145414 102145469 -64504827 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 1364 443 343 70 55 chrX 102146262 102146647 -64503649 - L2 LINE L2 -1468 1951 1561 1 1364 333 0 0 0 chrX 102147491 102147528 -64502768 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1364 717 12 0 0 chrX 102147528 102147609 -64502687 + (GA)n Simple_repeat Simple_repeat 1 82 0 1 1364 374 322 43 43 chrX 102147610 102147772 -64502524 - B3A SINE B2 -26 172 11 2 1364 1050 245 25 8 chrX 102150134 102150377 -64499919 + B4A SINE B4 13 259 -33 2 1364 651 95 0 0 chrX 102150377 102150482 -64499814 + (CA)n Simple_repeat Simple_repeat 2 106 0 2 1364 197 88 51 34 chrX 102151724 102151783 -64498513 + T-rich Low_complexity Low_complexity 3 62 0 2 1364 1022 209 74 33 chrX 102152112 102152355 -64497941 - MTD LTR MaLR 0 419 167 2 1364 694 270 68 17 chrX 102152367 102152604 -64497692 - Lx8 LINE L1 -1144 6329 6081 2 1364 327 25 0 0 chrX 102152781 102152821 -64497475 + (TAAG)n Simple_repeat Simple_repeat 2 41 0 2 1364 531 0 0 0 chrX 102152906 102152965 -64497331 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 2 1364 615 294 58 42 chrX 102152966 102153102 -64497194 + MIR SINE MIR 7 140 -122 2 1364 2532 153 162 8 chrX 102153102 102153609 -64496687 - RMER4B LTR ERVK 0 585 1 2 1364 615 294 58 42 chrX 102153609 102153713 -64496583 + MIR SINE MIR 141 251 -11 2 1364 1137 289 3 47 chrX 102153805 102154103 -64496193 + B4 SINE B4 8 292 0 2 1364 3193 161 82 16 chrX 102154265 102154838 -64495458 + RMER19C LTR ERVK 1 611 0 2 1364 476 32 0 16 chrX 102154860 102154923 -64495373 + (GAAAA)n Simple_repeat Simple_repeat 4 65 0 2 1364 238 167 19 0 chrX 102154927 102154981 -64495315 + L1_Mur2 LINE L1 5247 5301 -576 2 1364 33493 39 0 0 chrX 102154977 102160616 -64489680 + L1Md_T LINE L1 1 5589 -297 2 1364 8856 11 1 1 chrX 102160616 102161612 -64488684 + L1Md_T LINE L1 5590 6585 0 2 1364 509 287 161 26 chrX 102161625 102162059 -64488237 + L1MB8 LINE L1 1168 1656 -4728 2 1364 717 12 0 0 chrX 102162059 102162141 -64488155 + (GA)n Simple_repeat Simple_repeat 1 82 0 2 1364 904 262 101 26 chrX 102162141 102162838 -64487458 + L1MB8 LINE L1 1657 2518 -3858 2 1364 475 316 121 60 chrX 102162841 102163073 -64487223 + B4A SINE B4 4 249 -43 2 1364 520 229 329 43 chrX 102163124 102163472 -64486824 + L1MB8 LINE L1 2566 3013 -3363 2 1364 3314 68 0 18 chrX 102163736 102164186 -64486110 + L1Md_F2 LINE L1 6138 6579 -3 2 1364 7690 37 4 4 chrX 102164696 102165636 -64484660 + L1Md_F2 LINE L1 5641 6580 -2 2 1364 671 121 26 20 chrX 102165747 102165899 -64484397 + CT-rich Low_complexity Low_complexity 1 153 0 2 1364 381 308 73 29 chrX 102165900 102166037 -64484259 - B1F SINE Alu -5 144 2 2 1364 461 279 41 35 chrX 102166060 102166205 -64484091 - B1F SINE Alu -3 146 1 2 1364 442 278 10 0 chrX 102166251 102166445 -64483851 + L1MB8 LINE L1 3079 3274 -3102 2 1364 2973 75 40 33 chrX 102166450 102166931 -64483365 - Lx3B LINE L1 -727 6246 5763 2 1364 1236 93 0 6 chrX 102166928 102167111 -64483185 + Lx3B LINE L1 6716 6897 -76 2 1364 2749 207 100 33 chrX 102167324 102168013 -64482283 + RMER1C Other Other 606 1340 -2 2 1364 2776 107 0 2 chrX 102168059 102168464 -64481832 + L1_Mus4 LINE L1 6231 6634 -2 2 1364 21 0 0 0 chrX 102168464 102168485 -64481811 + AT_rich Low_complexity Low_complexity 1 21 0 2 1364 779 301 34 5 chrX 102168671 102168878 -64481418 + ID_B1 SINE B4 2 214 -10 2 1364 435 301 107 42 chrX 102168887 102169191 -64481105 + L1MB8 LINE L1 3279 3598 -2778 2 1364 2322 194 99 4 chrX 102169191 102169639 -64480657 + MT2A LTR ERVL 1 462 -71 2 1364 366 23 0 0 chrX 102169639 102169682 -64480614 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1364 2322 194 99 4 chrX 102169682 102169720 -64480576 + MT2A LTR ERVL 463 532 -1 2 1364 435 301 107 42 chrX 102169720 102169939 -64480357 + L1MB8 LINE L1 3599 3836 -2540 2 1364 650 143 43 50 chrX 102169943 102170083 -64480213 - L1_Mus1 LINE L1 -1 6566 6428 2 1364 7413 131 47 7 chrX 102170083 102172121 -64478175 - L1Md_F LINE L1 -3621 2262 174 2 1364 344 290 82 22 chrX 102172186 102172204 -64478092 + ID_B1 SINE B4 79 211 -13 2 1364 579 149 130 9 chrX 102172204 102172311 -64477985 + B1_Mus2 SINE Alu 14 134 -13 2 1364 194 0 39 0 chrX 102172311 102172337 -64477959 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 2 1364 406 285 254 57 chrX 102172416 102172660 -64477636 + MTE2a LTR MaLR 30 321 -58 2 1364 689 287 191 41 chrX 102172672 102173185 -64477111 + L1MB8 LINE L1 3969 4558 -1818 2 1364 324 187 18 27 chrX 102173268 102173378 -64476918 + L1MB8 LINE L1 4557 4665 -1717 2 1364 1007 113 14 0 chrX 102173413 102173554 -64476742 - B1_Mur4 SINE Alu -6 144 2 2 1364 1545 290 85 14 chrX 102173679 102174232 -64476064 - Lx9 LINE L1 -453 7191 6600 2 1364 633 273 112 0 chrX 102174287 102174474 -64475822 - ID_B1 SINE B4 -13 211 4 2 1364 3703 148 125 4 chrX 102174560 102175280 -64475016 + Lx4B LINE L1 6252 7058 0 2 1364 232 259 0 18 chrX 102175286 102175341 -64474955 - ID4_ SINE ID -28 55 2 2 1364 702 226 152 27 chrX 102175342 102175637 -64474659 + L1MB8 LINE L1 4668 4999 -1377 2 1364 555 286 13 26 chrX 102175740 102175891 -64474405 + RSINE1 SINE B4 2 150 -15 2 1364 875 263 57 62 chrX 102176019 102176557 -64473739 + L1MB8 LINE L1 5463 5995 -425 2 1364 642 214 0 37 chrX 102176609 102176798 -64473498 + L1M2 LINE L1 5119 5300 -843 2 1364 1075 300 90 23 chrX 102176848 102177247 -64473049 - Lx8 LINE L1 -448 7025 6600 2 1364 314 281 62 0 chrX 102177552 102177680 -64472616 + L1MB8 LINE L1 6090 6225 -189 2 1364 2241 123 6 0 chrX 102177990 102178315 -64471981 + ORR1A2 LTR MaLR 1 327 0 2 1364 584 172 47 0 chrX 102179187 102179315 -64470981 + L1MA7 LINE L1 5725 5858 -433 2 1364 2328 267 77 48 chrX 102179351 102179439 -64470857 - L1MC3 LINE L1 -275 7510 7417 2 1364 3234 38 8 5 chrX 102179439 102179834 -64470462 + MTA_Mm LTR MaLR 1 396 0 2 1364 2328 267 77 48 chrX 102179834 102180721 -64469575 - L1MC3 LINE L1 -369 7416 6507 2 1364 402 21 0 0 chrX 102180726 102180773 -64469523 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1364 999 223 105 125 chrX 102180914 102181257 -64469039 + MTE2a LTR MaLR 1 336 -43 2 1364 255 152 60 15 chrX 102181264 102181331 -64468965 - Lx7 LINE L1 0 7696 7627 2 1364 1557 252 97 4 chrX 102181332 102181825 -64468471 - Lx9 LINE L1 -490 7154 6616 2 1364 449 250 8 38 chrX 102181840 102181973 -64468323 - Lx9 LINE L1 -1090 6554 6426 2 1364 486 0 0 0 chrX 102182050 102182104 -64468192 + (GAAA)n Simple_repeat Simple_repeat 3 56 0 2 1364 356 186 42 0 chrX 102182205 102182372 -64467924 + (TA)n Simple_repeat Simple_repeat 1 174 0 2 1364 484 202 0 0 chrX 102182745 102182824 -64467472 - ID4 SINE ID -2 81 3 2 1364 639 65 0 0 chrX 102183906 102183999 -64466297 + (TG)n Simple_repeat Simple_repeat 2 94 0 2 1364 317 143 18 18 chrX 102184114 102184171 -64466125 + ORR1C2 LTR MaLR 3 59 -325 2 1364 300 186 0 0 chrX 102184215 102184274 -64466022 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 1364 656 254 48 135 chrX 102184275 102184630 -64465666 + L1MD LINE L1 5449 5772 -2223 2 1364 355 246 66 22 chrX 102184666 102184803 -64465493 - L1MC LINE L1 -906 5438 5296 2 1364 280 197 26 13 chrX 102184825 102184902 -64465394 + L1MC5 LINE L1 7493 7570 -391 2 1364 369 0 0 0 chrX 102184934 102184975 -64465321 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1364 486 0 0 0 chrX 102184975 102185028 -64465268 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1364 551 327 12 35 chrX 102185029 102185130 -64465166 - B3A SINE B2 -26 172 75 2 1364 3438 23 8 0 chrX 102185130 102185523 -64464773 + MTA_Mm LTR MaLR 1 396 0 2 1364 551 327 12 35 chrX 102185523 102185592 -64464704 - B3A SINE B2 -124 74 6 2 1364 31 68 0 0 chrX 102185706 102185765 -64464531 + AT_rich Low_complexity Low_complexity 1 59 0 2 1364 3981 55 2 20 chrX 102185986 102186489 -64463807 - L1_Mus1 LINE L1 0 6567 6074 2 1364 737 153 71 21 chrX 102186515 102186655 -64463641 - B1_Mus1 SINE Alu 0 148 2 2 1364 1239 61 18 6 chrX 102186690 102186854 -64463442 + B2_Mm2 SINE B2 3 168 -27 2 1364 1145 178 56 9 chrX 102186855 102187070 -64463226 + URR1A DNA MER1_type 1 225 -1 2 1364 225 286 59 64 chrX 102187071 102187273 -64463023 + L1MC5 LINE L1 7711 7911 -50 2 1364 360 39 0 0 chrX 102187290 102187341 -64462955 + L1_Mus2 LINE L1 6516 6566 0 2 1364 380 250 75 0 chrX 102187362 102187442 -64462854 + PB1D10 SINE Alu 3 88 -29 2 1364 303 361 25 25 chrX 102187496 102187658 -64462638 + L1ME3A LINE L1 4775 4936 -1210 2 1364 473 331 119 22 chrX 102187670 102187802 -64462494 + L1ME3A LINE L1 4982 5119 -1027 2 1364 3907 51 14 0 chrX 102187802 102188289 -64462007 + L1Md_F2 LINE L1 6088 6581 -1 2 1364 473 297 158 36 chrX 102188289 102188957 -64461339 + L1ME3A LINE L1 5120 5880 -293 2 1364 1820 218 16 68 chrX 102189326 102189684 -64460612 - MTD LTR MaLR -3 416 77 2 1364 615 27 0 0 chrX 102189684 102189757 -64460539 + (TC)n Simple_repeat Simple_repeat 2 74 0 2 1364 1820 218 16 68 chrX 102189757 102189837 -64460459 - MTD LTR MaLR -343 76 1 2 1364 3869 103 149 0 chrX 102189928 102190540 -64459756 - RMER19A LTR ERVK -10 727 25 2 1364 3906 290 49 21 chrX 102190569 102192457 -64457839 - Lx8 LINE L1 -195 7278 5341 2 1364 318 226 42 7 chrX 102192484 102192601 -64457695 - Lx8 LINE L1 -507 5373 5256 2 1364 899 294 86 29 chrX 102192652 102193069 -64457227 + MER90 LTR ERV1 21 461 -114 2 1364 641 249 172 63 chrX 102194082 102194414 -64455882 - MLT1B LTR MaLR -18 372 5 2 1364 512 272 88 184 chrX 102194736 102195046 -64455250 + MTEb LTR MaLR 1 283 -96 2 1364 645 239 144 21 chrX 102195046 102195234 -64455062 + B3 SINE B2 1 211 -5 2 1364 512 272 88 184 chrX 102195234 102195342 -64454954 + MTEb LTR MaLR 284 379 0 2 1364 450 244 0 11 chrX 102196723 102196810 -64453486 + B4A SINE B4 4 89 -203 2 1364 2230 154 27 15 chrX 102196813 102197214 -64453082 - MTC LTR MaLR 0 421 16 2 1364 712 244 43 7 chrX 102197194 102197378 -64452918 + B4A SINE B4 78 289 -3 2 1364 217 257 14 14 chrX 102197381 102197452 -64452844 + (CATA)n Simple_repeat Simple_repeat 2 72 0 2 1364 233 271 71 0 chrX 102197488 102197558 -64452738 - MER92B LTR ERV1 -66 570 496 2 1364 590 204 34 42 chrX 102197611 102197729 -64452567 - B1_Mur1 SINE Alu -7 142 26 2 1364 843 269 152 51 chrX 102197759 102198154 -64452142 - MER92B LTR ERV1 -145 491 57 2 1364 378 0 0 0 chrX 102198165 102198207 -64452089 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 2 1364 354 213 0 0 chrX 102198214 102198275 -64452021 - ID4_ SINE ID -1 82 22 2 1364 251 312 125 0 chrX 102198272 102198352 -64451944 - MER92B LTR ERV1 -546 90 1 2 1364 181 214 0 67 chrX 102198642 102198655 -64451641 - MIR SINE MIR -1 261 221 2 1364 189 161 0 0 chrX 102198655 102198686 -64451610 - L2b LINE L2 -17 3358 3328 2 1364 261 262 16 0 chrX 102199345 102199406 -64450890 + MIR SINE MIR 119 180 -82 2 1364 248 77 26 0 chrX 102199407 102199446 -64450850 + (TTCC)n Simple_repeat Simple_repeat 4 43 0 2 1364 610 203 104 8 chrX 102199480 102199614 -64450682 - B1_Mur4 SINE Alu -3 147 1 2 1364 537 16 0 0 chrX 102200106 102200168 -64450128 + (GA)n Simple_repeat Simple_repeat 1 62 0 2 1364 937 67 75 0 chrX 102200393 102200527 -64449769 + L1_Mus1 LINE L1 6424 6567 0 2 1364 4125 54 17 0 chrX 102200559 102201076 -64449220 + L1_Mus1 LINE L1 6040 6565 -2 2 1364 369 348 0 0 chrX 102201181 102201273 -64449023 - B4 SINE B4 -133 159 68 2 1364 313 263 56 11 chrX 102201270 102201387 -64448909 + B4 SINE B4 159 282 -10 2 1364 307 346 83 8 chrX 102201751 102201993 -64448303 + L1MC LINE L1 5283 5542 -2340 3 1364 347 270 16 8 chrX 102202091 102202218 -64448078 + CT-rich Low_complexity Low_complexity 4 131 0 3 1364 872 145 209 5 chrX 102202690 102202877 -64447419 - URR1B DNA MER1_type 0 225 1 3 1364 226 248 89 24 chrX 102203493 102203617 -64446679 + L1MB4 LINE L1 657 788 -5819 3 1364 234 242 31 31 chrX 102203656 102203720 -64446576 + B4 SINE B4 2 65 -227 3 1364 255 346 57 74 chrX 102203790 102203850 -64446446 - MLT2B4 LTR ERVL -59 497 441 3 1364 1062 60 0 35 chrX 102203850 102204024 -64446272 + (GAA)n Simple_repeat Simple_repeat 2 169 0 3 1364 505 305 62 101 chrX 102204024 102204363 -64445933 - MLT2B4 LTR ERVL -116 440 22 3 1364 1482 265 46 13 chrX 102204428 102204975 -64445321 + L1MB4 LINE L1 5584 6148 -32 3 1364 528 297 110 19 chrX 102204977 102205241 -64445055 + B4A SINE B4 1 288 -4 3 1364 279 175 17 17 chrX 102205693 102205751 -64444545 + ID4 SINE ID 1 58 -25 3 1364 269 247 0 27 chrX 102205766 102205841 -64444455 - Lx9 LINE L1 -484 7160 7088 3 1364 261 295 69 62 chrX 102205848 102205978 -64444318 - RMER20B LTR ERVK -17 610 480 3 1364 1853 280 60 19 chrX 102206402 102207036 -64443260 - Lx9 LINE L1 -627 7017 6358 3 1364 637 310 22 0 chrX 102207067 102207335 -64442961 + Lx9 LINE L1 7225 7498 -146 3 1364 4592 168 116 43 chrX 102207344 102208494 -64441802 + Lx2B LINE L1 5767 7000 0 3 1364 515 207 54 9 chrX 102209270 102209382 -64440914 + PB1D9 SINE Alu 1 117 -3 3 1364 672 220 28 158 chrX 102209384 102209638 -64440658 + B4 SINE B4 1 221 -71 3 1364 1046 51 7 0 chrX 102209505 102209643 -64440653 + B1_Mm SINE Alu 9 147 0 3 1364 489 76 0 0 chrX 102209643 102209709 -64440587 + (GA)n Simple_repeat Simple_repeat 2 67 0 3 1364 738 34 0 0 chrX 102209709 102209798 -64440498 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 3 1364 806 296 0 6 chrX 102209798 102209975 -64440321 + B4A SINE B4 114 289 -3 3 1364 342 80 0 0 chrX 102209979 102210029 -64440267 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1364 1083 157 86 0 chrX 102210369 102210464 -64439832 - Lx2 LINE L1 -19 6978 6884 3 1364 192 40 0 0 chrX 102210464 102210489 -64439807 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 3 1364 1083 157 86 0 chrX 102210489 102210590 -64439706 - Lx2 LINE L1 -114 6883 6766 3 1364 6974 104 17 7 chrX 102210590 102211985 -64438311 - Lx2 LINE L1 -363 6634 5225 3 1364 6633 66 9 4 chrX 102211990 102213605 -64436691 - L1VL4 LINE L1 -1748 1811 191 3 1364 387 296 0 0 chrX 102213700 102213788 -64436508 - B1_Mur3 SINE Alu -59 90 3 3 1364 423 347 33 8 chrX 102213799 102213921 -64436375 - RSINE1 SINE B4 -5 160 36 3 1364 185 0 40 0 chrX 102213937 102213962 -64436334 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1364 333 0 0 0 chrX 102214074 102214111 -64436185 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1364 336 333 57 9 chrX 102214128 102214234 -64436062 - RSINE1 SINE B4 -42 123 13 3 1364 326 313 50 0 chrX 102214353 102214452 -64435844 + B1_Mur2 SINE Alu 3 106 -43 3 1364 297 0 0 0 chrX 102214554 102214587 -64435709 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 3 1364 939 282 50 27 chrX 102214747 102215129 -64435167 - L1M2 LINE L1 -1252 4891 4463 3 1364 261 0 0 0 chrX 102215203 102215232 -64435064 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1364 858 249 67 0 chrX 102215298 102215507 -64434789 + ID_B1 SINE B4 2 224 0 3 1364 192 77 0 0 chrX 102215509 102215535 -64434761 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 3 1364 426 267 0 37 chrX 102215608 102215717 -64434579 - U6 snRNA snRNA -2 105 1 3 1364 34605 47 8 4 chrX 102215745 102221071 -64429225 + L1Md_T LINE L1 278 5586 -297 3 1364 8525 30 0 0 chrX 102221071 102222065 -64428231 + L1Md_T LINE L1 5587 6580 -2 3 1364 602 318 62 40 chrX 102223016 102223291 -64427005 + L1MD2 LINE L1 1 281 -7053 3 1364 7776 79 8 1 chrX 102223379 102225053 -64425243 + L1_Mus1 LINE L1 4885 6566 -1 3 1364 762 11 0 0 chrX 102225191 102225278 -64425018 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 3 1364 14233 45 3 2 chrX 102225286 102227713 -64422583 - L1Md_F2 LINE L1 -1 6581 4150 3 1364 477 272 0 0 chrX 102227738 102227863 -64422433 + L1MD2 LINE L1 718 842 -6492 3 1364 366 23 0 0 chrX 102228948 102228991 -64421305 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1364 670 293 10 36 chrX 102229117 102229312 -64420984 + B3A SINE B2 1 190 -8 3 1364 528 290 52 88 chrX 102229336 102229529 -64420767 + B4 SINE B4 84 269 -23 3 1364 1355 194 65 34 chrX 102229536 102229830 -64420466 + MTD LTR MaLR 1 303 -116 3 1364 228 147 0 0 chrX 102229865 102229899 -64420397 + MTD LTR MaLR 378 411 -8 3 1364 215 209 23 0 chrX 102229930 102229973 -64420323 + GA-rich Low_complexity Low_complexity 1 44 0 3 1364 260 312 170 47 chrX 102230031 102230432 -64419864 + L1MD2 LINE L1 1061 1510 -5824 3 1364 1379 159 0 4 chrX 102230953 102231181 -64419115 + Lx LINE L1 6420 6646 -8 3 1364 240 180 80 0 chrX 102231777 102231827 -64418469 + RSINE1 SINE B4 71 124 -41 3 1364 219 217 0 0 chrX 102231862 102231908 -64418388 - B1_Mur3 SINE Alu -46 103 58 3 1364 1021 108 35 24 chrX 102231967 102232137 -64418159 - B2_Mm2 SINE B2 -23 172 1 3 1364 609 159 51 36 chrX 102232143 102232280 -64418016 - Lx9 LINE L1 0 7644 7506 3 1364 933 119 35 7 chrX 102233011 102233155 -64417141 + B1_Mur3 SINE Alu 2 149 0 3 1364 288 0 0 0 chrX 102233169 102233201 -64417095 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1364 344 244 9 14 chrX 102233509 102233616 -64416680 + L1MD LINE L1 2715 2818 -3325 3 1364 295 329 146 0 chrX 102233636 102233773 -64416523 - Lx8 LINE L1 -554 6919 6763 3 1364 253 289 122 9 chrX 102233781 102233896 -64416400 + Lx8 LINE L1 7079 7206 -267 3 1364 344 310 15 23 chrX 102233944 102234076 -64416220 + L1MD2 LINE L1 1538 1668 -5666 3 1364 633 241 242 11 chrX 102234085 102234354 -64415942 + L1MB7 LINE L1 5838 6168 -16 3 1364 742 279 18 69 chrX 102234354 102234684 -64415612 + L1MD2 LINE L1 6320 6623 -681 3 1364 294 371 46 0 chrX 102234707 102234858 -64415438 - Lx8 LINE L1 -349 7124 6967 3 1364 576 248 69 15 chrX 102234859 102235088 -64415208 - L1M2 LINE L1 -375 5502 5247 3 1364 966 184 59 95 chrX 102235092 102235398 -64414898 + Lx9 LINE L1 7350 7644 0 3 1364 594 310 91 0 chrX 102235396 102235638 -64414658 - L1M2 LINE L1 -635 5245 4982 3 1364 531 0 0 0 chrX 102235643 102235702 -64414594 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 170 745 244 339 17 chrX 102235795 102236311 -64413985 - L1M2 LINE L1 -1782 4098 3400 3 1365 2404 72 19 0 chrX 102236311 102236618 -64413678 + L1_Mus3 LINE L1 6322 6634 -4 3 1365 808 232 138 3 chrX 102236618 102236929 -64413367 - L1M2 LINE L1 -2481 3399 3006 3 1365 23 33 0 0 chrX 102236930 102236960 -64413336 + AT_rich Low_complexity Low_complexity 1 30 0 3 1365 1563 275 39 0 chrX 102236973 102237337 -64412959 - Lx5 LINE L1 -4 7046 6669 3 1365 1100 84 124 0 chrX 102237403 102237456 -64412840 - L1_Mur2 LINE L1 -2337 3540 3488 3 1365 279 0 0 0 chrX 102237456 102237487 -64412809 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 1365 1100 84 124 0 chrX 102237487 102237611 -64412685 - L1_Mur2 LINE L1 -2390 3487 3342 3 1365 306 289 158 23 chrX 102238014 102238280 -64412016 - L1_Rod LINE L1 -6408 764 463 3 1365 891 297 46 29 chrX 102238756 102239106 -64411190 + L1MD2 LINE L1 6783 7138 -81 3 1365 1095 127 0 0 chrX 102239456 102239629 -64410667 + (GA)n Simple_repeat Simple_repeat 2 174 0 3 1365 219 150 33 16 chrX 102240104 102240165 -64410131 + GA-rich Low_complexity Low_complexity 6 67 0 3 1365 574 265 110 19 chrX 102240548 102240702 -64409594 - B3A SINE B2 -1 197 30 3 1365 228 100 0 0 chrX 102240711 102240751 -64409545 + (T)n Simple_repeat Simple_repeat 1 40 0 3 1365 1239 62 7 0 chrX 102240751 102240897 -64409399 - B1_Mm SINE Alu 0 147 1 3 1365 239 175 0 0 chrX 102240898 102240938 -64409358 - B3A SINE B2 -158 40 1 3 1365 641 13 0 0 chrX 102241105 102241182 -64409114 - L1Md_F2 LINE L1 -13 6569 6493 3 1365 413 234 94 77 chrX 102241419 102241600 -64408696 + RLTR23 LTR ERV1 247 430 0 3 1365 585 289 31 0 chrX 102241833 102241992 -64408304 - RSINE1 SINE B4 -1 164 1 3 1365 263 222 0 45 chrX 102242553 102242619 -64407677 - Lx9 LINE L1 -180 7464 7402 3 1365 3536 259 53 46 chrX 102242636 102242812 -64407484 + Lx7 LINE L1 5963 6133 -1563 3 1365 1282 61 0 0 chrX 102242812 102242959 -64407337 + B1_Mus2 SINE Alu 1 147 0 3 1365 3536 259 53 46 chrX 102242959 102243796 -64406500 + Lx7 LINE L1 6134 6983 -713 3 1365 772 279 38 8 chrX 102243803 102244038 -64406258 + Lx7 LINE L1 7118 7359 -337 3 1365 221 329 24 84 chrX 102244238 102244321 -64405975 + ID4 SINE ID 5 82 -1 3 1365 3159 138 27 129 chrX 102244344 102245396 -64404900 + L1Md_F LINE L1 562 1593 -4290 3 1365 1228 82 0 0 chrX 102245396 102245542 -64404754 + B1_Mus1 SINE Alu 2 147 -1 3 1365 3159 102 10 128 chrX 102245542 102246251 -64404045 + L1Md_F LINE L1 1594 1862 -4021 3 1365 2435 83 3 6 chrX 102246248 102246589 -64403707 + L1Md_F LINE L1 3946 4285 -1598 3 1365 3677 61 27 0 chrX 102246589 102247031 -64403265 + L1_Mus2 LINE L1 6109 6562 -4 3 1365 476 345 127 22 chrX 102247220 102247582 -64402714 - L1MC4a LINE L1 -2005 5877 5478 3 1365 408 71 0 0 chrX 102248487 102248543 -64401753 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 1365 355 339 51 105 chrX 102249871 102250184 -64400112 - MLT1A0 LTR MaLR -69 296 1 3 1365 498 362 12 35 chrX 102250390 102250474 -64399822 + B4A SINE B4 1 80 -212 3 1365 219 359 19 115 chrX 102250474 102250578 -64399718 + B1F2 SINE Alu 2 95 -54 3 1365 988 140 14 0 chrX 102250870 102251013 -64399283 + B1_Mur2 SINE Alu 5 149 0 3 1365 207 0 0 0 chrX 102251015 102251038 -64399258 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1365 319 374 0 92 chrX 102251330 102251483 -64398813 - ID_B1 SINE B4 -82 142 4 3 1365 342 0 0 0 chrX 102251483 102251521 -64398775 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1365 270 244 246 18 chrX 102251523 102251694 -64398602 - L1MA7 LINE L1 -76 6215 6006 3 1365 2012 243 94 22 chrX 102251853 102252408 -64397888 + Lx5 LINE L1 6527 7050 0 3 1365 209 196 43 0 chrX 102252421 102252467 -64397829 + GA-rich Low_complexity Low_complexity 2 49 0 3 1365 571 262 110 80 chrX 102252514 102252813 -64397483 + Lx8 LINE L1 7158 7465 -8 3 1365 636 183 28 84 chrX 102253107 102253167 -64397129 - ID_B1 SINE B4 -16 208 157 3 1365 1373 83 55 0 chrX 102253167 102253348 -64396948 - B2_Mm2 SINE B2 -3 192 2 3 1365 636 183 28 84 chrX 102253348 102253430 -64396866 - ID_B1 SINE B4 -68 156 74 3 1365 238 222 27 196 chrX 102253430 102253460 -64396836 - MT2B2 LTR ERVL -351 233 141 3 1365 461 239 0 81 chrX 102253472 102253595 -64396701 - PB1D10 SINE Alu 0 117 5 3 1365 259 340 122 11 chrX 102254008 102254279 -64396017 - L2a LINE L2 -201 3225 2925 3 1365 1239 56 0 0 chrX 102254528 102254671 -64395625 + B1_Mus2 SINE Alu 5 147 0 4 1365 349 281 19 10 chrX 102255356 102255460 -64394836 + RMER17C-int LTR ERVK 363 467 -2771 4 1365 1033 284 46 68 chrX 102255473 102255911 -64394385 + RodERV21-int LTR ERV1 705 1132 -3859 4 1365 670 271 104 67 chrX 102255930 102256246 -64394050 + RodERV21-int LTR ERV1 1106 1433 -3558 4 1365 327 210 32 0 chrX 102256240 102256335 -64393961 + RLTR6-int LTR ERV1 4979 5044 -2734 4 1365 3559 336 49 40 chrX 102256642 102258722 -64391574 + RodERV21-int LTR ERV1 2696 4793 -198 4 1365 262 365 163 12 chrX 102259444 102259702 -64390594 - L2a LINE L2 -668 2751 2455 3 1365 2093 156 361 21 chrX 102261252 102261764 -64388532 - RMER6C LTR ERVK -4 686 1 4 1365 249 333 73 0 chrX 102263024 102263120 -64387176 - MER5A DNA MER1_type -1 188 86 4 1365 228 278 11 22 chrX 102264083 102264175 -64386121 + GA-rich Low_complexity Low_complexity 4 94 0 4 1365 255 93 0 0 chrX 102265975 102266018 -64384278 + (T)n Simple_repeat Simple_repeat 1 43 0 4 1365 30 0 0 0 chrX 102266049 102266079 -64384217 + AT_rich Low_complexity Low_complexity 1 30 0 4 1365 293 272 187 11 chrX 102266111 102266293 -64384003 - MLT1A1 LTR MaLR -6 402 189 4 1365 181 296 106 47 chrX 102266464 102266549 -64383747 - MIRb SINE MIR -44 224 135 4 1365 23 54 0 0 chrX 102266562 102266599 -64383697 + AT_rich Low_complexity Low_complexity 1 37 0 4 1365 1155 160 61 13 chrX 102266778 102267006 -64383290 - RLTR42 LTR ERVK 0 239 1 4 1365 1460 228 115 13 chrX 102267114 102267487 -64382809 + MTD LTR MaLR 1 411 -8 4 1365 265 193 233 22 chrX 102267776 102267866 -64382430 - RLTR11A2 LTR ERVK -83 444 336 4 1365 230 229 154 62 chrX 102267876 102268006 -64382290 - RLTR15 LTR ERVK -217 142 1 4 1365 418 325 16 48 chrX 102268006 102268126 -64382170 + B3A SINE B2 80 195 -3 4 1365 3082 63 39 3 chrX 102268419 102268801 -64381495 + MTA_Mm LTR MaLR 1 396 0 4 1365 4415 17 0 0 chrX 102269576 102270049 -64380247 + L1Md_A LINE L1 6110 6582 0 4 1365 198 103 0 0 chrX 102270073 102270102 -64380194 + (A)n Simple_repeat Simple_repeat 1 29 0 4 1365 387 0 0 0 chrX 102270400 102270443 -64379853 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 4 1365 25 31 0 0 chrX 102270953 102270985 -64379311 + AT_rich Low_complexity Low_complexity 1 32 0 4 1365 955 272 140 51 chrX 102271547 102272081 -64378215 + L1MB2 LINE L1 5583 6164 -7 4 1365 1188 82 0 0 chrX 102272522 102272669 -64377627 + B1_Mm SINE Alu 1 147 0 4 1365 527 300 87 83 chrX 102272938 102273396 -64376900 - Lx8 LINE L1 -1134 6339 5880 4 1365 645 218 7 53 chrX 102273396 102273546 -64376750 - Lx8 LINE L1 -162 5685 5543 4 1365 315 250 22 0 chrX 102273562 102273654 -64376642 + L1_Rod LINE L1 4695 4788 -1059 4 1365 1312 246 35 167 chrX 102273669 102274405 -64375891 + L1_Rod LINE L1 4908 5546 -301 4 1365 189 0 0 0 chrX 102274444 102274465 -64375831 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1365 210 314 27 101 chrX 102275525 102275674 -64374622 + MER5B DNA MER1_type 27 164 -14 4 1365 26 82 0 0 chrX 102276221 102276282 -64374014 + AT_rich Low_complexity Low_complexity 1 61 0 4 1365 1252 61 0 0 chrX 102276358 102276505 -64373791 - B1_Mus1 SINE Alu 0 148 2 4 1365 288 364 0 0 chrX 102278438 102278578 -64371718 + GA-rich Low_complexity Low_complexity 2 141 0 4 1365 529 259 9 9 chrX 102279015 102279128 -64371168 + PB1D7 SINE Alu 1 113 -7 4 1365 198 0 0 0 chrX 102279316 102279338 -64370958 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 4 1365 367 226 26 86 chrX 102279338 102279445 -64370851 - B1F SINE Alu -7 142 40 4 1365 454 160 112 41 chrX 102279807 102279905 -64370391 + B1_Mus1 SINE Alu 37 141 -7 4 1365 1259 176 108 17 chrX 102280185 102280532 -64369764 + Lx7 LINE L1 7060 7696 0 4 1365 418 273 264 85 chrX 102280740 102281165 -64369131 + MLT1E1A LTR MaLR 12 563 -91 4 1365 950 72 16 8 chrX 102281224 102281351 -64368945 - B1_Mm SINE Alu -19 128 1 4 1365 318 335 106 81 chrX 102281439 102282023 -64368273 - L1M3e LINE L1 -5289 1741 1143 4 1365 257 309 41 17 chrX 102282051 102282172 -64368124 - L1M3e LINE L1 -5448 1582 1480 4 1365 2338 116 11 3 chrX 102282276 102282631 -64367665 - Lx3_Mus LINE L1 0 7009 6652 4 1365 996 117 46 72 chrX 102282641 102282835 -64367461 - B2_Mm2 SINE B2 -5 190 2 4 1365 540 255 0 19 chrX 102282836 102282996 -64367300 - L1M3e LINE L1 -6868 162 6 4 1365 276 77 0 0 chrX 102283084 102283123 -64367173 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 1365 282 303 12 73 chrX 102283254 102283336 -64366960 - PB1D7 SINE Alu -23 97 21 4 1365 409 172 263 0 chrX 102283337 102283436 -64366860 - B1_Mus2 SINE Alu -21 126 2 4 1365 667 269 139 17 chrX 102283610 102283962 -64366334 + L1MA6 LINE L1 5539 5933 -367 4 1365 641 275 58 63 chrX 102284152 102284653 -64365643 + L1MA9 LINE L1 4768 5245 -898 4 1365 264 183 0 0 chrX 102284683 102284743 -64365553 - Lx9 LINE L1 -686 6958 6899 4 1365 402 248 25 8 chrX 102284736 102284858 -64365438 + L1MA9 LINE L1 5550 5673 -639 4 1365 189 171 0 0 chrX 102284861 102284896 -64365400 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 4 1365 534 188 83 76 chrX 102284943 102285087 -64365209 - B1_Mur1 SINE Alu -1 148 4 4 1365 21 0 0 0 chrX 102285090 102285111 -64365185 + AT_rich Low_complexity Low_complexity 1 21 0 4 1365 618 302 21 47 chrX 102285117 102285308 -64364988 - B3A SINE B2 -10 188 3 4 1365 327 273 58 45 chrX 102285421 102285663 -64364633 + L1MA9 LINE L1 5814 6058 -254 4 1365 321 272 96 0 chrX 102285688 102285813 -64364483 + L1MA9 LINE L1 6176 6312 0 4 1365 411 205 259 0 chrX 102285851 102285963 -64364333 + B1_Mus1 SINE Alu 6 146 -2 4 1365 273 98 0 0 chrX 102285966 102286007 -64364289 + (TAA)n Simple_repeat Simple_repeat 2 42 0 4 1365 423 326 0 7 chrX 102286142 102286278 -64364018 + Lx7 LINE L1 7088 7222 -474 4 1365 232 191 28 56 chrX 102286290 102286362 -64363934 + T-rich Low_complexity Low_complexity 1 70 0 4 1365 349 204 116 62 chrX 102286415 102286561 -64363735 - L1MCa LINE L1 -5480 1028 875 4 1365 564 170 78 26 chrX 102286578 102286693 -64363603 - B1_Mus2 SINE Alu 0 147 27 4 1365 1069 59 0 7 chrX 102286902 102287039 -64363257 - B1_Mm SINE Alu -11 136 1 4 1365 462 279 9 0 chrX 102287065 102287176 -64363120 - PB1D10 SINE Alu 0 117 6 4 1365 420 335 26 5 chrX 102287216 102287408 -64362888 - L1MCa LINE L1 -6046 462 267 4 1365 271 253 21 0 chrX 102287671 102287766 -64362530 - L1MCa LINE L1 -6350 158 62 4 1365 890 291 117 11 chrX 102287806 102288157 -64362139 - Lx8 LINE L1 -143 7330 6943 4 1365 391 299 36 63 chrX 102288546 102288698 -64361598 - L1M5 LINE L1 -434 5730 5579 4 1365 1489 28 39 11 chrX 102288698 102288879 -64361417 - B2_Mm1a SINE B2 -5 188 3 4 1365 391 299 36 63 chrX 102288879 102289029 -64361267 - L1M5 LINE L1 -586 5578 5436 4 1365 346 230 0 14 chrX 102289084 102289162 -64361134 - B1_Mur1 SINE Alu -14 135 59 4 1365 606 172 0 0 chrX 102289174 102289290 -64361006 + L1MA4 LINE L1 5788 5903 -397 4 1365 1964 236 63 78 chrX 102289316 102290087 -64360209 - RMER17B LTR ERVK -57 851 1 4 1365 425 299 62 65 chrX 102290097 102290483 -64359813 + L1MA4 LINE L1 5914 6298 -2 4 1365 339 213 26 39 chrX 102290509 102290587 -64359709 + ID4 SINE ID 4 80 -3 4 1365 548 308 124 31 chrX 102290770 102291028 -64359268 - B4A SINE B4 -6 286 5 4 1365 1359 198 17 31 chrX 102291362 102291649 -64358647 - MTD LTR MaLR -136 283 1 4 1365 1855 148 144 12 chrX 102291688 102292029 -64358267 - ORR1B1 LTR MaLR -8 386 1 4 1365 300 250 35 18 chrX 102292081 102292195 -64358101 + L1M2 LINE L1 2427 2542 -3601 4 1365 888 236 38 57 chrX 102292209 102292474 -64357822 - RMER5 LTR ERV1 -22 512 253 4 1365 322 176 162 0 chrX 102292467 102292541 -64357755 - ORR1D1 LTR MaLR -288 86 1 4 1365 1522 187 121 21 chrX 102292668 102293007 -64357289 + ORR1D1 LTR MaLR 2 374 0 4 1365 506 263 47 19 chrX 102293275 102293488 -64356808 + MER65-int LTR ERV1 1871 2089 -2782 4 1365 1144 215 146 14 chrX 102293587 102293950 -64356346 + Lx2B LINE L1 6589 6999 -1 4 1365 792 98 118 22 chrX 102294722 102294857 -64355439 - B1_Mur3 SINE Alu -1 148 1 4 1365 200 209 0 0 chrX 102294959 102295002 -64355294 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1365 327 331 0 0 chrX 102295269 102295417 -64354879 - L1MEc LINE L1 -5632 768 621 4 1365 401 253 11 0 chrX 102295613 102295704 -64354592 + B1F SINE Alu 7 98 -51 4 1365 330 26 0 0 chrX 102296040 102296079 -64354217 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1365 236 214 143 0 chrX 102296168 102296252 -64354044 + L1_Mur1 LINE L1 5491 5586 -300 4 1365 300 300 8 83 chrX 102296369 102296489 -64353807 - MLT1E2 LTR MaLR -513 114 4 4 1365 281 336 68 15 chrX 102296494 102296760 -64353536 - L1MEg LINE L1 -3644 2502 2223 4 1365 279 258 16 16 chrX 102297772 102297835 -64352461 + ID4 SINE ID 2 64 -19 4 1365 369 62 0 0 chrX 102297849 102297897 -64352399 + (GGA)n Simple_repeat Simple_repeat 2 49 0 4 1365 760 166 94 40 chrX 102298009 102298210 -64352086 - Lx5 LINE L1 0 7050 6839 4 1365 306 217 95 12 chrX 102298574 102298658 -64351638 - L1MEg LINE L1 -4313 1929 1839 4 1365 279 273 25 38 chrX 102298688 102298768 -64351528 + LTR55 LTR ERV 14 92 -456 4 1365 242 203 62 15 chrX 102299694 102299759 -64350537 + LTR55 LTR ERV 446 513 -35 4 1365 222 156 22 0 chrX 102300128 102300173 -64350123 + B4A SINE B4 2 47 -245 4 1365 26 0 0 0 chrX 102300772 102300798 -64349498 + AT_rich Low_complexity Low_complexity 1 26 0 4 1365 614 242 6 17 chrX 102301000 102301181 -64349115 - L1MA8 LINE L1 -172 6119 5941 4 1365 216 0 0 0 chrX 102301674 102301698 -64348598 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1365 860 185 105 25 chrX 102302173 102302373 -64347923 + B3 SINE B2 1 216 0 4 1365 1692 226 126 6 chrX 102302699 102303236 -64347060 - Lx6 LINE L1 -27 7433 6506 4 1365 414 0 0 0 chrX 102303236 102303282 -64347014 + (TTTTG)n Simple_repeat Simple_repeat 3 48 0 4 1365 757 156 62 8 chrX 102303306 102303435 -64346861 - B1_Mur3 SINE Alu -13 136 1 4 1365 448 136 57 0 chrX 102303463 102303551 -64346745 - L1MA7 LINE L1 -6 6285 6193 4 1365 289 68 53 27 chrX 102303610 102303685 -64346611 + (TTTTTG)n Simple_repeat Simple_repeat 2 78 0 4 1365 1110 75 0 39 chrX 102303691 102303844 -64346452 - B1_Mus1 SINE Alu -1 147 1 4 1365 577 291 67 63 chrX 102303858 102304320 -64345976 - L1MA7 LINE L1 -179 6112 5649 4 1365 1300 232 127 16 chrX 102304397 102304551 -64345745 - MTD LTR MaLR 0 419 240 4 1365 390 42 0 0 chrX 102304551 102304599 -64345697 + (CTTG)n Simple_repeat Simple_repeat 3 50 0 5 1365 1300 232 127 16 chrX 102304599 102304821 -64345475 - MTD LTR MaLR -180 239 3 4 1365 844 307 4 29 chrX 102304822 102305060 -64345236 - B4A SINE B4 -59 233 2 5 1365 585 254 43 99 chrX 102305061 102305224 -64345072 - L1MA7 LINE L1 -707 5584 5435 4 1365 1043 221 14 0 chrX 102305224 102305432 -64344864 - B3 SINE B2 -5 211 1 5 1365 585 254 43 99 chrX 102305432 102305591 -64344705 - L1MA7 LINE L1 -857 5434 5280 4 1365 342 0 0 0 chrX 102305592 102305630 -64344666 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1365 509 259 26 8 chrX 102305650 102305767 -64344529 - ID_B1 SINE B4 -13 211 93 5 1365 1303 289 104 30 chrX 102305782 102306357 -64343939 + Lx8 LINE L1 6633 7250 -223 5 1365 1254 103 27 0 chrX 102306383 102306568 -64343728 - URR1B DNA MER1_type 0 225 36 5 1365 237 252 38 136 chrX 102306809 102306993 -64343303 - L1MA7 LINE L1 -996 5144 4979 4 1365 278 279 0 152 chrX 102307118 102307172 -64343124 - L1MA7 LINE L1 -2056 4084 4051 4 1365 1193 28 0 28 chrX 102307172 102307317 -64342979 - B1_Mm SINE Alu -5 142 2 5 1365 325 274 0 13 chrX 102307317 102307427 -64342869 - L1MA7 LINE L1 -2090 4053 3945 4 1365 551 324 7 20 chrX 102307437 102307588 -64342708 - B1F SINE Alu 0 149 1 5 1365 1432 157 168 46 chrX 102307657 102307708 -64342588 - ORR1B2 LTR MaLR 0 367 323 5 1365 1026 90 144 6 chrX 102307708 102307875 -64342421 - B2_Mm2 SINE B2 -5 190 1 5 1365 1432 157 168 46 chrX 102307875 102308150 -64342146 - ORR1B2 LTR MaLR -45 322 1 5 1365 267 325 16 24 chrX 102308282 102308405 -64341891 - Lx9 LINE L1 -323 7321 7200 5 1365 1055 207 122 8 chrX 102308432 102308685 -64341611 + RMER15 LTR ERVL 294 575 0 5 1365 1038 290 86 21 chrX 102308690 102309261 -64341035 - L1MA7 LINE L1 -3416 2727 2120 4 1365 704 274 31 90 chrX 102309273 102309454 -64340842 + Lx6 LINE L1 7154 7311 -149 5 1365 1136 56 14 0 chrX 102309454 102309597 -64340699 - B1_Mus2 SINE Alu -1 146 2 5 1365 704 274 31 90 chrX 102309597 102309736 -64340560 + Lx6 LINE L1 7312 7454 -6 5 1365 1092 91 0 0 chrX 102309857 102310000 -64340296 + B1_Mus1 SINE Alu 1 143 -5 5 1365 396 0 0 0 chrX 102310208 102310252 -64340044 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1365 240 306 0 0 chrX 102310653 102310715 -64339581 + GA-rich Low_complexity Low_complexity 4 65 0 5 1365 25 75 0 0 chrX 102310973 102311026 -64339270 + AT_rich Low_complexity Low_complexity 1 53 0 5 1365 447 236 36 45 chrX 102312711 102312822 -64337474 + PB1D10 SINE Alu 3 112 -5 5 1365 372 235 12 36 chrX 102313402 102313486 -64336810 - ID4 SINE ID -1 82 1 5 1365 1306 305 30 73 chrX 102313551 102314085 -64336211 - MER89 LTR ERV1 -48 511 1 5 1365 669 297 33 0 chrX 102319661 102319843 -64330453 + B3A SINE B2 1 188 -10 5 1365 777 261 26 12 chrX 102319875 102320059 -64330237 + ID_B1 SINE B4 51 240 -52 5 1365 1479 270 41 52 chrX 102320106 102320537 -64329759 + Lx8 LINE L1 6921 7356 -117 5 1365 960 128 0 0 chrX 102320537 102320693 -64329603 + (GA)n Simple_repeat Simple_repeat 1 156 0 5 1365 1479 270 41 52 chrX 102320693 102320820 -64329476 + Lx8 LINE L1 7357 7472 -1 5 1365 797 268 31 63 chrX 102320834 102321057 -64329239 + B3A SINE B2 1 216 0 5 1365 3000 91 2 2 chrX 102321142 102321559 -64328737 - L1_Mus4 LINE L1 -5 6631 6215 5 1365 216 299 179 7 chrX 102321851 102321996 -64328300 - L2 LINE L2 -504 2915 2746 5 1365 326 341 103 24 chrX 102322156 102322369 -64327927 + MIR SINE MIR 9 238 -24 5 1365 283 274 59 59 chrX 102322382 102322518 -64327778 - LTR16A LTR ERVL 0 451 316 5 1365 4177 43 8 10 chrX 102322542 102323057 -64327239 - L1_Mus1 LINE L1 0 6567 6054 5 1365 2339 58 6 0 chrX 102323057 102323369 -64326927 + L1_Mus1 LINE L1 5710 6023 -544 5 1365 391 430 37 45 chrX 102323369 102323637 -64326659 - LTR16A LTR ERVL -164 287 22 5 1365 2164 234 83 68 chrX 102323851 102323926 -64326370 - MYSERV16_I-int LTR ERVK -232 2094 2027 5 1365 205 29 29 29 chrX 102323926 102323961 -64326335 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 5 1365 2164 231 77 65 chrX 102323961 102324886 -64325410 - MYSERV16_I-int LTR ERVK -300 2026 1169 5 1365 278 228 60 60 chrX 102324897 102324981 -64325315 - RMER4B LTR ERVK -53 532 449 5 1365 457 226 14 3 chrX 102324981 102325136 -64325160 - MurERV4_19-int LTR ERVK -396 5384 5298 5 1365 2291 131 41 78 chrX 102325194 102325656 -64324640 + RLTR11B LTR ERVK 1 445 -8 5 1365 1029 301 109 40 chrX 102325665 102326268 -64324028 - RMER1C Other Other -670 672 28 5 1365 630 291 67 45 chrX 102326739 102327055 -64323241 - L1M5 LINE L1 -415 5749 5427 5 1365 1287 105 0 21 chrX 102327055 102327249 -64323047 - B2_Mm2 SINE B2 -4 191 2 5 1365 630 291 67 45 chrX 102327249 102327307 -64322989 - L1M5 LINE L1 -738 5426 5367 5 1365 1488 240 103 21 chrX 102327316 102327832 -64322464 - L1MA7 LINE L1 -25 6266 5709 5 1365 576 192 0 8 chrX 102327838 102327969 -64322327 - L1M3 LINE L1 -1477 4663 4534 5 1365 817 207 13 7 chrX 102327971 102328122 -64322174 - B3 SINE B2 0 216 65 5 1365 536 274 44 11 chrX 102328122 102328303 -64321993 + L1M2 LINE L1 4558 4744 -1399 5 1365 1191 271 196 43 chrX 102328306 102328443 -64321853 - L1M3 LINE L1 -2207 3933 3783 5 1365 1338 35 112 0 chrX 102328443 102328613 -64321683 - B2_Mm1a SINE B2 -4 189 1 5 1365 1191 271 196 43 chrX 102328613 102329100 -64321196 - L1M3 LINE L1 -2358 3782 3210 5 1365 2934 114 45 17 chrX 102329100 102329565 -64320731 - Lx2 LINE L1 -13 6984 6507 5 1365 1191 271 196 43 chrX 102329565 102329690 -64320606 - L1M3 LINE L1 -2931 3209 3090 5 1365 3386 35 2 0 chrX 102329690 102330085 -64320211 + MTA_Mm LTR MaLR 1 396 0 5 1365 1191 271 196 43 chrX 102330085 102330630 -64319666 - L1M3 LINE L1 -3051 3089 2439 5 1365 321 247 2 18 chrX 102330706 102330826 -64319470 - Lx7 LINE L1 -8 7688 7589 5 1365 236 264 28 0 chrX 102331030 102331102 -64319194 - LTR73 LTR ERV1 -247 325 252 5 1365 224 59 0 29 chrX 102332186 102332221 -64318075 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 5 1365 4965 108 75 0 chrX 102332283 102333007 -64317289 - Lx3B LINE L1 -1 6972 6195 5 1365 300 268 309 0 chrX 102333021 102333144 -64317152 - L1M5 LINE L1 -1443 4703 4543 5 1365 21 36 0 0 chrX 102333208 102333236 -64317060 + AT_rich Low_complexity Low_complexity 1 28 0 5 1365 794 236 50 30 chrX 102333241 102333442 -64316854 + B3 SINE B2 1 205 -11 5 1365 1963 64 4 4 chrX 102333604 102333885 -64316411 + L1VL2 LINE L1 599 879 -5456 5 1365 1119 261 39 24 chrX 102333888 102334269 -64316027 - L1_Rod LINE L1 -1580 4267 3881 5 1365 531 82 0 0 chrX 102334269 102334342 -64315954 + (TTTC)n Simple_repeat Simple_repeat 3 75 0 5 1365 264 167 115 0 chrX 102334342 102334420 -64315876 - L1_Rod LINE L1 -1960 3887 3801 5 1365 217 51 25 25 chrX 102334488 102334528 -64315768 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 5 1365 1377 170 26 0 chrX 102334533 102334763 -64315533 + Lx3C LINE L1 6734 6969 -7 5 1365 2260 113 45 26 chrX 102334791 102335172 -64315124 + Lx LINE L1 6266 6653 -1 5 1365 239 235 0 0 chrX 102335177 102335245 -64315051 + A-rich Low_complexity Low_complexity 1 68 0 5 1365 2636 43 3 3 chrX 102335317 102335644 -64314652 - L1_Mus1 LINE L1 -1 6566 6240 5 1365 1137 170 6 0 chrX 102335789 102335971 -64314325 + MTC LTR MaLR 185 367 -54 5 1365 27 0 0 0 chrX 102337397 102337424 -64312872 + AT_rich Low_complexity Low_complexity 1 27 0 5 1365 22 0 0 0 chrX 102337953 102337975 -64312321 + AT_rich Low_complexity Low_complexity 1 22 0 5 1365 942 276 87 26 chrX 102338051 102338690 -64311606 - L1MA4A LINE L1 -1573 6123 5445 5 1365 549 253 76 35 chrX 102338705 102338902 -64311394 - B3 SINE B2 0 216 12 5 1365 891 85 0 0 chrX 102338893 102339011 -64311285 - B2_Mm2 SINE B2 -76 119 2 5 1365 180 0 0 0 chrX 102339013 102339033 -64311263 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1365 582 311 26 0 chrX 102339068 102339370 -64310926 - L1MA4A LINE L1 -845 5298 4989 5 1365 825 294 45 0 chrX 102339376 102339558 -64310738 - B3 SINE B2 -6 210 20 5 1365 8256 19 0 3 chrX 102339558 102340490 -64309806 + RLTR13B3 LTR ERVK 1 929 0 5 1365 825 294 45 0 chrX 102340490 102340508 -64309788 - B3 SINE B2 -197 19 2 5 1365 840 302 32 27 chrX 102340563 102340971 -64309325 - L1MA4A LINE L1 -1206 4937 4528 5 1365 2405 147 45 14 chrX 102341122 102341563 -64308733 - RMER6A LTR ERVK 0 756 302 5 1365 666 270 0 25 chrX 102341576 102341739 -64308557 - ID_B1 SINE B4 -62 162 4 5 1365 684 228 117 0 chrX 102341988 102342150 -64308146 + B3A SINE B2 2 182 -16 5 1365 621 249 133 32 chrX 102342176 102342454 -64307842 - Charlie1a DNA MER1_type -155 1300 995 5 1365 350 174 70 101 chrX 102342678 102342821 -64307475 + MLT1A1 LTR MaLR 238 408 0 5 1365 228 293 0 17 chrX 102342842 102342901 -64307395 - B3A SINE B2 -46 152 95 5 1365 231 282 106 51 chrX 102342904 102343196 -64307100 + L1M2 LINE L1 2146 2453 -4396 5 1365 27 0 0 0 chrX 102343273 102343300 -64306996 + AT_rich Low_complexity Low_complexity 1 27 0 5 1365 25 31 0 0 chrX 102343314 102343346 -64306950 + AT_rich Low_complexity Low_complexity 1 32 0 5 1365 771 251 16 32 chrX 102343481 102343666 -64306630 - B3A SINE B2 -16 182 1 5 1365 237 155 141 12 chrX 102343682 102343767 -64306529 - Lx8 LINE L1 -2 7471 7376 5 1365 1855 75 0 8 chrX 102344060 102344315 -64305981 - RMER17D2 LTR ERVK -556 253 1 5 1365 522 248 95 20 chrX 102344372 102344520 -64305776 - RMER30 DNA MER1_type -5 197 39 5 1365 574 243 76 63 chrX 102344640 102344798 -64305498 - RSINE1 SINE B4 0 165 6 5 1365 1002 223 15 5 chrX 102344821 102345024 -64305272 + B3 SINE B2 2 206 -10 5 1365 577 236 81 0 chrX 102345226 102345349 -64304947 - B1F2 SINE Alu -8 141 9 5 1365 294 246 0 0 chrX 102345397 102345461 -64304835 + BC1_Mm scRNA scRNA 10 73 -10 5 1365 221 322 47 73 chrX 102345475 102345524 -64304772 - B2_Mm2 SINE B2 -9 186 1 5 1365 561 298 0 7 chrX 102345524 102345666 -64304630 - RSINE1 SINE B4 -23 142 2 5 1365 633 235 218 0 chrX 102345986 102346165 -64304131 + ID_B1 SINE B4 3 220 -4 5 1365 1420 63 5 26 chrX 102346439 102346634 -64303662 + B2_Mm1t SINE B2 1 191 -2 5 1365 468 0 0 0 chrX 102346756 102346808 -64303488 + (GA)n Simple_repeat Simple_repeat 2 53 0 5 1365 342 0 0 0 chrX 102347020 102347058 -64303238 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1365 612 0 0 0 chrX 102347700 102347768 -64302528 + (TCC)n Simple_repeat Simple_repeat 2 69 0 5 1365 10017 68 14 3 chrX 102347772 102349304 -64300992 - Lx3_Mus LINE L1 0 7009 5465 5 1365 8546 190 25 48 chrX 102349359 102352162 -64298134 - Lx5 LINE L1 -196 6854 4124 5 1365 398 20 20 0 chrX 102352162 102352213 -64298083 + (TTA)n Simple_repeat Simple_repeat 2 53 0 5 1365 1057 347 12 18 chrX 102352361 102352866 -64297430 - Lx8 LINE L1 -149 7324 6823 5 1365 327 361 37 27 chrX 102353784 102353972 -64296324 + MLT2F LTR ERVL 419 608 -55 5 1365 649 350 112 19 chrX 102354029 102354440 -64295856 + MER74A LTR ERVL 106 554 -4 5 1365 1131 55 7 20 chrX 102354888 102355035 -64295261 - B1_Mus2 SINE Alu 0 147 3 6 1365 447 286 135 22 chrX 102355791 102356013 -64294283 + L1M3e LINE L1 2 248 -6782 6 1365 1470 83 17 34 chrX 102356025 102356263 -64294033 - L1_Mus3 LINE L1 -7 6631 6398 6 1365 4775 98 3 1 chrX 102356263 102356964 -64293332 + L1_Mm LINE L1 5109 5810 -73 6 1365 855 183 109 0 chrX 102356970 102357172 -64293124 + L1_Mur2 LINE L1 5243 5466 -411 6 1365 402 168 37 0 chrX 102357174 102357281 -64293015 + Lx5 LINE L1 6940 7050 0 6 1365 3569 159 19 19 chrX 102357282 102358050 -64292246 - Lx4A LINE L1 -795 6263 5612 6 1365 5177 128 28 3 chrX 102358051 102358827 -64291469 + Lx4A LINE L1 6253 7048 -10 6 1365 3486 179 94 47 chrX 102358890 102359700 -64290596 - Lx6 LINE L1 -230 7466 6354 6 1365 234 0 0 0 chrX 102359707 102359733 -64290563 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 6 1365 763 209 0 7 chrX 102360751 102360905 -64289391 - Lx6 LINE L1 -1113 6347 6195 6 1365 31 44 0 0 chrX 102360909 102360954 -64289342 + AT_rich Low_complexity Low_complexity 1 45 0 6 1365 475 311 50 14 chrX 102361002 102361279 -64289017 - Lx9 LINE L1 -89 7555 7269 6 1365 360 0 0 0 chrX 102361392 102361432 -64288864 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 1365 597 298 127 9 chrX 102361457 102361772 -64288524 - MT2A LTR ERVL -3 530 179 6 1365 348 337 94 75 chrX 102361820 102362032 -64288264 - MTEa LTR MaLR -163 216 1 6 1365 388 284 70 16 chrX 102362098 102362341 -64287955 - L1M3f LINE L1 -4126 1202 947 6 1365 444 297 8 51 chrX 102362447 102362564 -64287732 - PB1D10 SINE Alu -5 112 1 6 1365 349 355 147 5 chrX 102363579 102363763 -64286533 + MLT1I LTR MaLR 202 411 0 6 1365 1545 265 25 46 chrX 102364339 102364821 -64285475 - Lx8 LINE L1 -283 7190 6719 6 1365 240 309 0 14 chrX 102364826 102364895 -64285401 - RSINE1 SINE B4 -95 70 3 6 1365 1854 260 49 3 chrX 102364950 102365579 -64284717 - L1_Mur3 LINE L1 -1309 4571 3914 6 1365 495 0 0 0 chrX 102365579 102365634 -64284662 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 1365 234 0 0 0 chrX 102365634 102365659 -64284637 + (GA)n Simple_repeat Simple_repeat 2 27 0 6 1365 616 244 16 0 chrX 102365662 102365789 -64284507 - B1_Mur2 SINE Alu -20 129 1 6 1365 374 315 70 8 chrX 102365676 102365804 -64284492 - B4 SINE B4 -88 204 69 6 1365 288 288 96 81 chrX 102365708 102365844 -64284452 - MT2B2 LTR ERVL -346 238 101 6 1365 397 250 0 19 chrX 102365905 102366011 -64284285 - L1_Mur3 LINE L1 -2048 3832 3729 6 1365 811 276 88 25 chrX 102366071 102366696 -64283600 - L1_Rod LINE L1 -2723 3417 2750 6 1365 335 327 0 0 chrX 102366725 102366832 -64283464 - L1_Mur3 LINE L1 -3110 2770 2664 6 170 268 280 103 23 chrX 102367016 102367378 -64282918 - L1_Mur3 LINE L1 -4034 1843 1373 6 1366 640 300 16 16 chrX 102368363 102368556 -64281740 - B3A SINE B2 -4 194 2 6 1366 212 178 22 0 chrX 102369156 102369201 -64281095 - B4 SINE B4 -245 47 2 6 1366 4545 65 23 10 chrX 102369202 102369807 -64280489 + L1Md_F2 LINE L1 5970 6582 0 6 1366 29 60 0 0 chrX 102370306 102370356 -64279940 + AT_rich Low_complexity Low_complexity 1 50 0 6 1366 324 308 19 9 chrX 102370644 102370749 -64279547 + RMER15-int LTR ERVL 2045 2150 -2849 6 1366 748 213 0 0 chrX 102370836 102370972 -64279324 - B1_Mur3 SINE Alu -12 137 2 6 1366 3810 190 20 25 chrX 102370993 102371146 -64279150 - Lx5 LINE L1 -3 7047 6899 6 1366 270 0 0 0 chrX 102371146 102371176 -64279120 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1366 3810 190 20 25 chrX 102371176 102371789 -64278507 - Lx5 LINE L1 -152 6898 6285 6 1366 369 210 0 47 chrX 102371790 102371875 -64278421 + Lx5 LINE L1 6794 6874 -176 6 1366 6434 146 26 17 chrX 102371875 102373414 -64276882 - Lx5 LINE L1 -757 6293 4732 6 1366 189 0 0 0 chrX 102373414 102373435 -64276861 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1366 1166 91 0 21 chrX 102373435 102373620 -64276676 - L1Md_F2 LINE L1 -1 6581 6401 6 1366 6434 145 26 17 chrX 102373620 102373639 -64276657 - Lx5 LINE L1 -1146 4731 4717 6 1366 3129 127 6 90 chrX 102373633 102374058 -64276238 - Lx5 LINE L1 -2005 3872 3479 6 1366 1141 75 7 0 chrX 102374058 102374204 -64276092 - B1_Mus2 SINE Alu 0 147 1 6 1366 3129 127 6 90 chrX 102374204 102374446 -64275850 - Lx5 LINE L1 -2399 3478 3261 6 1366 4589 79 35 2 chrX 102374448 102375068 -64275228 - Lx3_Mus LINE L1 0 7009 6369 6 1366 2814 93 27 5 chrX 102375068 102375480 -64274816 + BGLII LTR ERVK 1 421 0 6 1366 1218 205 28 36 chrX 102376376 102376735 -64273561 + RMER3D-int LTR ERVK 2487 2842 0 6 1366 2494 112 44 5 chrX 102376735 102377140 -64273156 + BGLII LTR ERVK 1 421 0 6 1366 1027 53 0 0 chrX 102377140 102377271 -64273025 - Lx3_Mus LINE L1 -635 6374 6244 6 1366 7292 173 8 77 chrX 102377269 102379990 -64270306 - Lx5 LINE L1 -2597 3283 882 6 1366 800 197 0 0 chrX 102380283 102380425 -64269871 + B1_Mur4 SINE Alu 2 143 -7 6 1366 261 247 27 0 chrX 102380889 102380962 -64269334 + CT-rich Low_complexity Low_complexity 2 76 0 6 1366 227 242 41 21 chrX 102381261 102381358 -64268938 - L1ME4a LINE L1 -3 6121 6023 6 1366 605 13 26 0 chrX 102382274 102382350 -64267946 + B1_Mm SINE Alu 70 147 0 6 1366 297 316 91 102 chrX 102382582 102382934 -64267362 + ORR1D2 LTR MaLR 23 370 0 6 1366 623 249 82 55 chrX 102383088 102383271 -64267025 - MLT1C LTR MaLR 0 467 280 6 1366 814 227 219 2 chrX 102383564 102383788 -64266508 + ORR1C2 LTR MaLR 1 265 -119 6 1366 424 234 53 18 chrX 102384306 102384419 -64265877 - RMER13B LTR ERVK -785 123 7 6 1366 3165 191 86 56 chrX 102384491 102384636 -64265660 - Lx9 LINE L1 0 7644 7461 6 1366 444 128 0 0 chrX 102384636 102384714 -64265582 + (TA)n Simple_repeat Simple_repeat 1 78 0 6 1366 3165 191 86 56 chrX 102384714 102385372 -64264924 - Lx9 LINE L1 -184 7460 6818 6 1366 1153 205 104 66 chrX 102385372 102385659 -64264637 - RMER20B LTR ERVK -24 603 306 6 1366 721 110 0 8 chrX 102386166 102386285 -64264011 - Lx LINE L1 -2 6652 6535 6 1366 589 243 314 17 chrX 102386288 102386527 -64263769 - RMER20B LTR ERVK -308 319 10 6 1366 360 85 0 0 chrX 102386537 102386584 -64263712 - Lx9 LINE L1 -827 6817 6771 6 1366 525 98 0 0 chrX 102387105 102387187 -64263109 + L1_Mus2 LINE L1 6484 6565 -1 6 1366 192 77 0 0 chrX 102387313 102387339 -64262957 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 6 1366 25 31 0 0 chrX 102387978 102388010 -64262286 + AT_rich Low_complexity Low_complexity 1 32 0 6 1366 5188 48 0 0 chrX 102388053 102388680 -64261616 - L1Md_A LINE L1 -1 6581 5955 6 1366 929 261 14 9 chrX 102388697 102388910 -64261386 - B3 SINE B2 -1 215 2 6 1366 189 0 0 0 chrX 102389215 102389236 -64261060 + (GA)n Simple_repeat Simple_repeat 1 21 0 6 1366 951 284 101 107 chrX 102389427 102389952 -64260344 + MT2A LTR ERVL 3 524 -9 6 1366 1204 225 88 58 chrX 102390277 102390430 -64259866 - ORR1D1 LTR MaLR 0 374 224 6 1366 1801 169 54 8 chrX 102390430 102390781 -64259515 + ORR1B2 LTR MaLR 1 367 0 6 1366 1204 225 88 58 chrX 102390781 102390990 -64259306 - ORR1D1 LTR MaLR -151 223 2 6 1366 6577 184 57 34 chrX 102390990 102392328 -64257968 - ORR1D1-int LTR MaLR 0 1370 2 6 1366 1204 233 138 21 chrX 102392330 102392655 -64257641 - ORR1D1 LTR MaLR -11 363 1 6 1366 1668 106 122 66 chrX 102392946 102393250 -64257046 + ORR1A4 LTR MaLR 1 321 -8 6 1366 7080 58 2 0 chrX 102393530 102394411 -64255885 + L1Md_F2 LINE L1 5688 6570 -12 6 1366 198 0 0 0 chrX 102394416 102394438 -64255858 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 6 1366 1070 91 0 0 chrX 102394438 102394581 -64255715 - B2_Mm2 SINE B2 -48 147 5 6 1366 684 313 76 37 chrX 102394658 102394986 -64255310 - Lx9 LINE L1 -323 7321 6981 6 1366 27 29 0 0 chrX 102394986 102395020 -64255276 + AT_rich Low_complexity Low_complexity 1 34 0 6 1366 5524 53 4 7 chrX 102395095 102395799 -64254497 - L1Md_F2 LINE L1 0 6582 5881 6 1366 1055 263 191 2 chrX 102395819 102396383 -64253913 - Lx9 LINE L1 -89 7555 6885 6 1366 295 200 79 4 chrX 102396414 102396516 -64253780 - Lx9 LINE L1 -1714 5930 5777 6 1366 1038 95 3 1 chrX 102396814 102396981 -64253315 + L1Md_F2 LINE L1 5448 5615 -697 6 1366 8335 34 1 4 chrX 102396981 102397979 -64252317 + L1Md_F2 LINE L1 5587 6581 -1 6 1366 1636 27 0 0 chrX 102397987 102398174 -64252122 + B2_Mm1a SINE B2 1 187 -6 6 1366 782 168 249 0 chrX 102398543 102398716 -64251580 - B3 SINE B2 0 216 1 6 1366 228 293 0 0 chrX 102398996 102399054 -64251242 + ID4_ SINE ID 15 72 -11 6 1366 586 266 6 43 chrX 102399332 102399493 -64250803 + RSINE1 SINE B4 5 159 -6 6 1366 210 71 0 0 chrX 102399495 102399523 -64250773 + (ATG)n Simple_repeat Simple_repeat 2 29 0 6 1366 267 254 0 31 chrX 102400600 102400665 -64249631 - L3b LINE CR1 -124 358 296 6 1366 337 363 41 0 chrX 102400871 102401017 -64249279 - MIRb SINE MIR -102 166 15 6 1366 1864 107 84 32 chrX 102401510 102401820 -64248476 - ORR1A3 LTR MaLR 0 326 1 6 1366 420 20 0 0 chrX 102401863 102401912 -64248384 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 1366 282 29 0 0 chrX 102401912 102401946 -64248350 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1366 1796 182 260 33 chrX 102402709 102403193 -64247103 + RMER19B LTR ERVK 308 901 -1 6 1366 21 0 0 0 chrX 102403564 102403585 -64246711 + AT_rich Low_complexity Low_complexity 1 21 0 6 1366 1185 34 0 20 chrX 102404817 102404967 -64245329 - B1_Mus2 SINE Alu 0 147 1 6 1366 2416 176 5 5 chrX 102405022 102405439 -64244857 + MTC LTR MaLR 1 417 -4 6 1366 282 160 0 0 chrX 102405472 102405522 -64244774 + GA-rich Low_complexity Low_complexity 1 50 0 6 1366 313 304 35 9 chrX 102406069 102406182 -64244114 + MIRb SINE MIR 85 200 -68 6 1366 288 281 92 14 chrX 102406218 102406359 -64243937 + L1MB4 LINE L1 5839 5990 -190 6 1366 4769 69 80 1 chrX 102406358 102407044 -64243252 + L1_Mur1 LINE L1 5147 5886 0 6 1366 6879 209 205 32 chrX 102407075 102408420 -64241876 - L1_Rod LINE L1 -511 5336 3815 6 1366 3688 162 40 24 chrX 102408420 102409101 -64241195 + RLTR17 LTR ERVK 1 692 0 6 1366 6879 209 205 32 chrX 102409101 102409274 -64241022 - L1_Rod LINE L1 -2033 3814 3599 6 1366 1166 106 0 11 chrX 102409274 102409456 -64240840 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 1366 6879 209 205 32 chrX 102409456 102410541 -64239755 - L1_Rod LINE L1 -2249 3598 2284 6 1366 258 266 0 0 chrX 102410535 102410599 -64239697 - L1_Mur3 LINE L1 -1150 4730 4667 6 1366 507 276 225 23 chrX 102410608 102410729 -64239567 - Lx9 LINE L1 0 7644 7515 6 1366 312 48 0 0 chrX 102410729 102410771 -64239525 + (TC)n Simple_repeat Simple_repeat 2 43 0 6 1366 507 276 225 23 chrX 102410771 102411080 -64239216 - Lx9 LINE L1 -130 7514 7128 6 1366 2943 227 54 34 chrX 102411078 102411849 -64238447 - L1_Rod LINE L1 -362 5485 4691 6 1366 1576 175 74 63 chrX 102411849 102411904 -64238392 - ORR1D1 LTR MaLR 0 374 311 6 1366 432 0 0 0 chrX 102411904 102411952 -64238344 + (TA)n Simple_repeat Simple_repeat 2 49 0 6 1366 1576 175 74 63 chrX 102411952 102412262 -64238034 - ORR1D1 LTR MaLR -64 310 5 6 1366 2943 227 54 34 chrX 102412262 102412482 -64237814 - L1_Rod LINE L1 -1157 4690 4474 6 1366 1705 271 87 59 chrX 102412496 102412812 -64237484 - L1M2 LINE L1 -1445 4698 4361 6 1366 797 302 5 0 chrX 102412812 102413014 -64237282 - ID_B1 SINE B4 -17 207 5 7 1366 1705 271 90 60 chrX 102413014 102413935 -64236361 - L1M2 LINE L1 -1783 4360 3388 6 1366 507 194 51 0 chrX 102413956 102414054 -64236242 - MTE2a LTR MaLR 0 379 277 7 1366 532 72 0 67 chrX 102414057 102414146 -64236150 + L1_Mus1 LINE L1 6484 6566 -1 7 1366 994 97 54 109 chrX 102414187 102414408 -64235888 - Lx4A LINE L1 -1013 6045 5837 7 1366 4343 110 48 37 chrX 102414409 102415091 -64235205 + Lx4A LINE L1 6367 7056 -2 7 1366 808 277 11 11 chrX 102415137 102415327 -64234969 - MTE2a LTR MaLR -182 197 8 7 1366 1994 277 128 46 chrX 102415330 102416609 -64233687 - MTE2a-int LTR MaLR -2 1578 29 7 1366 229 128 26 0 chrX 102416944 102416983 -64233313 - MER5A1 DNA MER1_type 0 166 127 7 1366 776 200 0 28 chrX 102416985 102417129 -64233167 + B1_Mur2 SINE Alu 1 140 -9 7 1366 250 247 104 0 chrX 102417162 102417239 -64233057 - MER5A1 DNA MER1_type -24 142 58 7 1366 442 337 88 4 chrX 102417571 102417833 -64232463 - Lx8 LINE L1 -30 7443 7160 7 1366 1363 300 225 15 chrX 102417844 102418631 -64231665 + Lx8 LINE L1 5740 6691 -782 7 1366 703 143 83 16 chrX 102418699 102418820 -64231476 + B1_Mus2 SINE Alu 10 138 -9 7 1366 261 0 0 0 chrX 102418820 102418849 -64231447 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 1366 294 260 100 0 chrX 102418853 102418953 -64231343 + Lx8 LINE L1 6788 6897 -576 7 1366 406 371 90 16 chrX 102419078 102419401 -64230895 - MT2A LTR ERVL -75 458 112 7 1366 225 0 0 0 chrX 102419501 102419526 -64230770 + (TA)n Simple_repeat Simple_repeat 1 25 0 7 1366 186 428 13 38 chrX 102420092 102420250 -64230046 - L2c LINE L2 -210 3177 3024 7 1366 294 309 134 0 chrX 102420328 102420425 -64229871 + PB1D10 SINE Alu 1 110 -7 7 1366 21 0 0 0 chrX 102420694 102420715 -64229581 + AT_rich Low_complexity Low_complexity 1 21 0 7 1366 5166 95 16 22 chrX 102420886 102421628 -64228668 - Lx3B LINE L1 -2 6971 6234 7 1366 764 187 0 35 chrX 102421628 102421772 -64228524 + MTD LTR MaLR 63 201 -218 7 1366 236 134 147 15 chrX 102421772 102421840 -64228456 + Lx9 LINE L1 7550 7626 -18 7 1366 855 222 45 0 chrX 102421900 102422076 -64228220 + MTD LTR MaLR 236 419 0 7 1366 261 0 0 0 chrX 102422161 102422190 -64228106 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1366 320 266 57 0 chrX 102422262 102422420 -64227876 - L1_Rod LINE L1 -7 5840 5674 7 1366 204 83 56 0 chrX 102422477 102422513 -64227783 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 7 1366 417 330 9 0 chrX 102422514 102422620 -64227676 - PB1 SINE Alu -20 107 1 7 1366 644 208 25 16 chrX 102422777 102422899 -64227397 + RMER13B LTR ERVK 2 124 -784 7 1366 1282 208 23 180 chrX 102422909 102423348 -64226948 - ORR1D2 LTR MaLR 0 370 1 7 1366 286 295 29 9 chrX 102423359 102423464 -64226832 - MIR SINE MIR -149 119 7 7 1366 637 253 27 7 chrX 102423761 102423908 -64226388 - ID_B1 SINE B4 -5 219 70 7 1366 443 301 66 0 chrX 102424792 102424928 -64225368 + RSINE1 SINE B4 4 148 -17 7 1366 265 264 165 0 chrX 102425344 102425435 -64224861 + MER5A1 DNA MER1_type 2 107 -59 7 1366 240 290 43 0 chrX 102425449 102425518 -64224778 + MER5A DNA MER1_type 1 72 -117 7 1366 303 300 89 18 chrX 102425579 102425691 -64224605 + PB1D7 SINE Alu 1 120 0 7 1366 217 65 87 0 chrX 102425691 102425737 -64224559 + A-rich Low_complexity Low_complexity 1 50 0 7 1366 180 282 101 13 chrX 102426168 102426247 -64224049 - MIRm SINE MIR -96 180 95 7 1366 1168 301 64 12 chrX 102426856 102427202 -64223094 + MTE2b LTR MaLR 5 368 -11 7 1366 193 300 0 0 chrX 102428967 102429007 -64221289 - MIRc SINE MIR -118 150 111 7 1366 259 301 207 14 chrX 102429006 102429151 -64221145 - MIRb SINE MIR -69 199 27 7 1366 196 353 44 62 chrX 102429187 102429347 -64220949 - L2c LINE L2 -228 3159 3003 7 1366 263 214 112 56 chrX 102429769 102429858 -64220438 + MLT1A1 LTR MaLR 311 404 -4 7 1366 774 259 36 15 chrX 102429912 102430108 -64220188 + B3 SINE B2 6 205 -11 7 1366 23 54 0 0 chrX 102430121 102430158 -64220138 + AT_rich Low_complexity Low_complexity 1 37 0 7 1366 1537 231 47 28 chrX 102430496 102430857 -64219439 + ORR1D2 LTR MaLR 3 370 0 7 1366 204 122 0 0 chrX 102431199 102431240 -64219056 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 7 1366 710 68 29 0 chrX 102431241 102431344 -64218952 + (GGAAA)n Simple_repeat Simple_repeat 4 109 0 7 1366 647 282 135 20 chrX 102431362 102431659 -64218637 + MTEa LTR MaLR 35 365 -14 7 1366 493 302 115 11 chrX 102431687 102431878 -64218418 + MTEa-int LTR MaLR 18 228 -1352 7 1366 23 54 0 0 chrX 102432049 102432086 -64218210 + AT_rich Low_complexity Low_complexity 1 37 0 7 1366 279 245 10 58 chrX 102432259 102432363 -64217933 - L1ME2z LINE L1 -29 6415 6317 7 1366 356 296 107 65 chrX 102432363 102432759 -64217537 - MLT1G LTR MaLR -2 487 67 7 1366 1572 181 57 61 chrX 102432792 102432919 -64217377 + RMER1C Other Other 936 1067 -275 7 1366 2603 25 3 48 chrX 102432919 102433256 -64217040 + RLTRETN_Mm LTR ERVK 1 322 0 7 1366 1572 181 57 61 chrX 102433256 102433535 -64216761 + RMER1C Other Other 1068 1340 -2 7 1366 836 118 91 91 chrX 102433545 102433731 -64216565 + B2_Mm2 SINE B2 2 187 -8 7 1366 310 325 204 10 chrX 102433739 102433935 -64216361 - L1MC4 LINE L1 -1443 6599 6366 7 1366 4279 145 19 1 chrX 102434010 102434955 -64215341 - Lx4B LINE L1 -681 6377 5413 7 1366 2073 191 6 39 chrX 102434935 102435706 -64214590 - Lx4B LINE L1 -4244 1633 897 7 1366 609 317 62 0 chrX 102435886 102436110 -64214186 - Lx8 LINE L1 -474 6999 6762 7 1366 635 311 63 69 chrX 102436156 102436489 -64213807 - L1M2 LINE L1 -839 5304 4948 7 1366 2141 108 17 64 chrX 102436489 102436834 -64213462 + ORR1A4 LTR MaLR 1 329 0 7 1366 635 311 63 69 chrX 102436834 102436897 -64213399 - L1M2 LINE L1 -1196 4947 4908 7 1366 180 0 0 0 chrX 102436897 102436917 -64213379 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 7 1366 1115 73 0 0 chrX 102436917 102437053 -64213243 - B1_Mus1 SINE Alu -11 137 2 7 1366 635 311 63 69 chrX 102437053 102437599 -64212697 - L1M2 LINE L1 -1236 4907 4366 7 1366 245 109 22 0 chrX 102437718 102437764 -64212532 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 7 1366 1622 25 0 0 chrX 102437919 102438115 -64212181 + L1Md_A LINE L1 5391 5586 -297 7 1366 8529 27 1 0 chrX 102438115 102439108 -64211188 + L1Md_A LINE L1 5587 6580 -2 7 1366 335 213 0 0 chrX 102439110 102439171 -64211125 - Lx8 LINE L1 -333 7140 7080 7 1366 1615 259 110 63 chrX 102439184 102439482 -64210814 + L1_Rod LINE L1 3344 3658 -2189 7 1366 1315 140 40 0 chrX 102439482 102439704 -64210592 + Lx3B LINE L1 6740 6970 -3 7 1366 1615 259 110 63 chrX 102439704 102440302 -64209994 + L1_Rod LINE L1 3659 4282 -1565 7 1366 574 274 113 34 chrX 102440359 102440752 -64209544 - RLTR15 LTR ERVK -68 291 1 7 1366 2011 84 70 7 chrX 102440797 102441097 -64209199 + L1_Mus3 LINE L1 6314 6632 -6 7 1366 3471 149 32 5 chrX 102441176 102441809 -64208487 - MYSERV6-int LTR ERVK -95 8864 8215 7 1366 3499 86 0 2 chrX 102441809 102442278 -64208018 - L1_Mus4 LINE L1 -5 6631 6164 7 1366 1995 82 117 3 chrX 102442278 102442585 -64207711 + L1_Mus4 LINE L1 5829 6170 -466 7 1366 361 102 22 0 chrX 102442585 102442653 -64207643 - MYSERV6-int LTR ERVK -759 5791 5731 7 1366 814 163 0 0 chrX 102442653 102442800 -64207496 + L1_Mur2 LINE L1 5057 5203 -674 7 1366 568 117 7 0 chrX 102442804 102442909 -64207387 - MYSERV6-int LTR ERVK -873 8086 7991 7 1366 204 40 0 0 chrX 102442913 102442938 -64207358 + (TC)n Simple_repeat Simple_repeat 2 26 0 7 1366 466 124 0 22 chrX 102442939 102443030 -64207266 + (TA)n Simple_repeat Simple_repeat 2 90 0 7 1366 582 15 0 0 chrX 102443030 102443097 -64207199 + (TC)n Simple_repeat Simple_repeat 2 68 0 7 1366 1286 143 14 0 chrX 102443097 102443320 -64206976 + L1_Mm LINE L1 4328 4553 -1330 7 1366 6926 148 15 1 chrX 102443321 102444629 -64205667 - L1_Mur1 LINE L1 -1655 4231 2906 7 1366 37274 35 3 6 chrX 102444633 102450994 -64199302 - L1Md_T LINE L1 0 6582 249 7 1366 5819 110 24 28 chrX 102450995 102452059 -64198237 - MusHAL1 LINE L1 -998 1714 655 7 1366 28742 88 15 17 chrX 102452059 102457254 -64193042 + L1Md_F2 LINE L1 208 5387 -496 7 1366 2163 35 0 7 chrX 102457245 102457533 -64192763 - L1_Mm LINE L1 -469 5414 5129 7 1366 5908 113 5 2 chrX 102457533 102458385 -64191911 + L1Md_F2 LINE L1 5710 6563 -19 7 1366 3800 82 60 0 chrX 102458399 102458568 -64191728 - L1VL2 LINE L1 -2043 1572 1404 7 1366 432 0 0 0 chrX 102458568 102458616 -64191680 + (TA)n Simple_repeat Simple_repeat 2 49 0 7 1366 4178 102 51 1 chrX 102458616 102459649 -64190647 - L1VL2 LINE L1 -2212 1403 314 7 1366 696 203 10 30 chrX 102459663 102459866 -64190430 - MYSERV6-int LTR ERVK -1037 5513 5315 7 1366 428 271 119 12 chrX 102459868 102460036 -64190260 - RMER4A LTR ERVK -26 440 255 7 1366 1146 244 33 15 chrX 102460036 102460307 -64189989 - MYSERV6-int LTR ERVK -1416 5134 4859 7 1366 919 239 77 54 chrX 102460306 102460642 -64189654 - MYSERV6-int LTR ERVK -2422 4128 3785 7 1366 253 330 9 0 chrX 102460651 102460763 -64189533 - MYSERV6-int LTR ERVK -8048 911 799 7 1366 5689 58 59 1 chrX 102460803 102461594 -64188702 - L1_Mus2 LINE L1 0 6566 5730 7 1366 5893 74 5 0 chrX 102461584 102462396 -64187900 + L1_Mus2 LINE L1 4902 5717 -166 7 1366 1180 54 0 0 chrX 102462651 102462798 -64187498 + B1_Mus2 SINE Alu 1 147 0 7 1366 213 119 0 0 chrX 102462798 102462840 -64187456 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 7 1366 1465 65 0 5 chrX 102462943 102463130 -64187166 - B2_Mm2 SINE B2 -8 187 2 7 1366 813 215 0 111 chrX 102463656 102463855 -64186441 + B3 SINE B2 31 207 -9 7 1366 1863 202 101 28 chrX 102463866 102464440 -64185856 + Lx9 LINE L1 5327 5973 -1671 7 1366 1241 139 0 46 chrX 102464639 102464840 -64185456 + ORR1A4 LTR MaLR 1 191 -138 7 1366 1699 185 83 21 chrX 102464840 102465034 -64185262 + RMER17C LTR ERVK 1 210 -200 7 1366 1165 76 23 0 chrX 102465034 102465206 -64185090 + (TCCCC)n Simple_repeat Simple_repeat 1 176 0 7 1366 1699 185 83 21 chrX 102465206 102465397 -64184899 + RMER17C LTR ERVK 211 410 0 7 1366 866 181 206 34 chrX 102465397 102465689 -64184607 + RMER17C-int LTR ERVK 1 342 -2896 7 1366 821 187 218 27 chrX 102466357 102466764 -64183532 + RMER17C-int LTR ERVK 1508 1991 -1247 7 1366 929 122 24 6 chrX 102466759 102466924 -64183372 + RMER17C-int LTR ERVK 2169 2336 -902 7 1366 2097 118 183 19 chrX 102466953 102467522 -64182774 + RMER17C-int LTR ERVK 2577 3238 0 7 1366 1896 135 8 77 chrX 102467522 102468048 -64182248 + RMER17C LTR ERVK 16 439 -519 7 1366 959 47 16 0 chrX 102468066 102468194 -64182102 - B1_Mm SINE Alu -16 131 2 7 1366 791 200 60 47 chrX 102468194 102468298 -64181998 + ORR1A4 LTR MaLR 215 321 -8 7 1366 3786 223 115 5 chrX 102468485 102470597 -64179699 + RMER1A Other Other 1 1025 -5 7 1366 1174 143 22 0 chrX 102470607 102470789 -64179507 + B2_Mm2 SINE B2 2 187 -8 7 1366 243 0 0 0 chrX 102470916 102470943 -64179353 + (TA)n Simple_repeat Simple_repeat 2 28 0 7 1366 2947 212 45 31 chrX 102471084 102471861 -64178435 - Lx9 LINE L1 0 7644 6857 7 1366 675 248 33 98 chrX 102472081 102472296 -64178000 - RMER20B LTR ERVK -426 201 1 7 1366 2117 212 113 29 chrX 102472296 102473417 -64176879 - Lx9 LINE L1 -782 6862 5532 7 1366 183 42 0 0 chrX 102473632 102473656 -64176640 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 1366 247 25 50 0 chrX 102473890 102473930 -64176366 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 7 1366 208 237 34 0 chrX 102474471 102474530 -64175766 + T-rich Low_complexity Low_complexity 2 62 0 7 1366 2961 71 27 5 chrX 102474534 102474946 -64175350 + BGLII LTR ERVK 1 421 0 7 1366 400 222 0 24 chrX 102474951 102475034 -64175262 + B1_Mur1 SINE Alu 63 143 -6 8 1366 1868 112 0 7 chrX 102475118 102475397 -64174899 - Lx2 LINE L1 -11 6986 6710 8 1366 346 155 35 0 chrX 102475532 102475590 -64174706 + B1_Mus1 SINE Alu 6 65 -83 8 1366 433 210 182 24 chrX 102475813 102476025 -64174271 - L1MC4a LINE L1 -697 7298 7065 8 1366 593 70 23 0 chrX 102476027 102476113 -64174183 + (TTTC)n Simple_repeat Simple_repeat 3 90 0 8 1366 27 29 0 0 chrX 102476198 102476232 -64174064 + AT_rich Low_complexity Low_complexity 1 34 0 8 1366 408 155 0 0 chrX 102476280 102476351 -64173945 + (TA)n Simple_repeat Simple_repeat 2 72 0 8 1366 741 185 0 15 chrX 102476373 102476505 -64173791 - B3 SINE B2 -86 130 1 8 1366 307 190 239 8 chrX 102477244 102477361 -64172935 + L1_Mur3 LINE L1 3690 3833 -2047 8 1366 375 182 45 0 chrX 102477362 102477450 -64172846 + Lx8 LINE L1 5694 5785 -1911 8 1366 1990 245 78 32 chrX 102477438 102478096 -64172200 + Lx8 LINE L1 6015 6698 -775 8 1366 1235 250 22 3 chrX 102478151 102478472 -64171824 + MERVL_2A-int LTR ERVL 3839 4165 -1596 8 1366 1575 235 46 38 chrX 102478509 102478876 -64171420 + ORR1D2 LTR MaLR 1 370 0 8 1366 1373 271 23 5 chrX 102478876 102479266 -64171030 + MERVL_2A-int LTR ERVL 4232 4628 -1129 8 1366 4453 238 72 52 chrX 102479290 102479453 -64170843 - Lx9 LINE L1 -13 7631 7437 8 1366 216 0 0 0 chrX 102479453 102479477 -64170819 + (TA)n Simple_repeat Simple_repeat 2 25 0 8 1366 4453 238 72 52 chrX 102479477 102479814 -64170482 - Lx9 LINE L1 -208 7436 7109 8 1366 1467 59 21 0 chrX 102479814 102480000 -64170296 - B2_Mm2 SINE B2 -5 190 1 8 1366 4453 238 72 52 chrX 102480000 102480980 -64169316 - Lx9 LINE L1 -536 7108 6122 8 1366 278 254 0 16 chrX 102481005 102481069 -64169227 + MERVL_2A-int LTR ERVL 4697 4759 -1002 8 1366 2044 276 75 49 chrX 102481113 102481986 -64168310 + MERVL_2A-int LTR ERVL 4867 5761 0 8 1366 898 339 80 30 chrX 102481996 102482287 -64168009 + MT2A LTR ERVL 11 327 -206 8 1366 5226 62 10 0 chrX 102482287 102482959 -64167337 - L1Md_F2 LINE L1 0 6582 5904 8 1366 898 339 80 30 chrX 102482959 102483093 -64167203 + MT2A LTR ERVL 328 457 -76 8 1366 180 437 9 9 chrX 102483258 102483371 -64166925 + MER5A DNA MER1_type 72 184 -5 8 1366 210 322 33 22 chrX 102483835 102483927 -64166369 + L2 LINE L2 2428 2520 -899 8 1366 859 260 122 24 chrX 102484152 102484646 -64165650 + Lx8 LINE L1 6874 7415 -281 8 1366 24731 137 19 23 chrX 102484691 102490747 -64159549 + L1_Mus3 LINE L1 609 6638 0 8 1366 743 262 89 31 chrX 102490768 102491059 -64159237 - Lx3C LINE L1 -8 6968 6661 8 1366 422 290 107 23 chrX 102491354 102491654 -64158642 - L1MB5 LINE L1 -27 6147 5823 8 1366 29516 107 14 3 chrX 102491709 102497787 -64152509 + L1_Mus1 LINE L1 418 6567 0 8 170 1430 234 92 16 chrX 102497838 102498530 -64151766 - L1MB5 LINE L1 -390 5790 5042 8 1367 2614 209 83 47 chrX 102498541 102498679 -64151617 - Lx7 LINE L1 -6 7690 7554 8 1367 320 64 0 21 chrX 102498679 102498727 -64151569 + (TAA)n Simple_repeat Simple_repeat 1 47 0 8 1367 2614 209 83 47 chrX 102498727 102499337 -64150959 - Lx7 LINE L1 -143 7553 6915 8 1367 3031 161 88 12 chrX 102499338 102499691 -64150605 + RMER6A LTR ERVK 4 376 -380 8 1367 549 0 0 0 chrX 102499691 102499752 -64150544 + (GA)n Simple_repeat Simple_repeat 2 62 0 8 1367 3031 161 88 12 chrX 102499752 102500000 -64150296 + RMER6A LTR ERVK 377 650 -106 8 1367 510 186 62 0 chrX 102500000 102500097 -64150199 + RMER6A LTR ERVK 652 754 -2 1 1367 4668 194 94 6 chrX 102500097 102501165 -64149131 - Lx7 LINE L1 -778 6918 5757 2 1367 1400 159 31 3 chrX 102501160 102501450 -64148846 - L1_Mur3 LINE L1 -3507 2373 2076 3 1367 359 204 97 0 chrX 102501472 102501565 -64148731 - RLTR15 LTR ERVK -209 150 49 4 1367 2861 26 15 0 chrX 102501568 102501909 -64148387 - L1Md_F3 LINE L1 -14 6570 6225 5 1367 2214 35 3 3 chrX 102501909 102502194 -64148102 + L1Md_F3 LINE L1 5879 6163 -421 5 1367 437 94 0 15 chrX 102502194 102502259 -64148037 - RLTR15 LTR ERVK -295 64 1 4 1367 3103 201 46 15 chrX 102502259 102503377 -64146919 - L1_Mur3 LINE L1 -3948 1932 796 3 1367 2138 119 28 0 chrX 102503377 102503695 -64146601 + ORR1A2 LTR MaLR 1 327 0 6 1367 2784 246 76 30 chrX 102503695 102504078 -64146218 - L1_Mur3 LINE L1 -6933 795 372 3 1367 708 244 81 25 chrX 102504149 102504347 -64145949 - B3 SINE B2 -6 210 2 7 1367 23 33 0 0 chrX 102504364 102504394 -64145902 + AT_rich Low_complexity Low_complexity 1 30 0 8 1367 570 315 91 96 chrX 102504394 102504791 -64145505 + MLT2D LTR ERVL 1 395 -19 9 1367 407 266 70 19 chrX 102504819 102504976 -64145320 - L1M4 LINE L1 -1115 5031 4867 1 1367 1165 181 96 8 chrX 102504976 102505215 -64145081 + ORR1B1 LTR MaLR 1 260 -134 1 1367 775 332 60 51 chrX 102505551 102505887 -64144409 - MTE-int LTR MaLR -1092 488 150 1 1367 431 250 22 16 chrX 102506077 102506238 -64144058 - ORR1A2 LTR MaLR -192 175 1 1 1367 300 70 0 0 chrX 102506430 102506473 -64143823 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1367 8050 150 160 13 chrX 102506564 102508368 -64141928 + Lx LINE L1 3047 5116 -770 1 1367 36427 14 1 8 chrX 102508368 102513571 -64136725 + L1Md_A LINE L1 422 5586 -297 1 1367 8674 21 0 0 chrX 102513571 102514567 -64135729 + L1Md_A LINE L1 5587 6582 0 1 1367 6985 115 12 8 chrX 102514567 102516111 -64134185 + Lx LINE L1 5099 6652 -2 1 1367 1893 44 0 0 chrX 102517332 102517561 -64132735 - L1Md_T LINE L1 -1 6581 6353 1 1367 353 174 58 0 chrX 102517624 102517710 -64132586 + L1MA9 LINE L1 6163 6253 -59 1 1367 333 288 163 42 chrX 102517996 102518204 -64132092 + RMER15 LTR ERVL 308 540 -35 1 1367 3105 64 20 2 chrX 102518204 102518597 -64131699 - MTB LTR MaLR 0 400 1 2 1367 333 288 163 42 chrX 102518597 102518627 -64131669 + RMER15 LTR ERVL 541 575 0 1 1367 252 156 89 50 chrX 102518704 102518805 -64131491 - L1MB3 LINE L1 -41 6130 6026 2 1367 1088 194 22 125 chrX 102518891 102519185 -64131111 + ORR1C1 LTR MaLR 9 261 -109 2 1367 7260 25 0 0 chrX 102519185 102520133 -64130163 - L1Md_A LINE L1 -102 6480 5533 2 1367 1251 147 39 0 chrX 102520161 102520365 -64129931 + ORR1C1 LTR MaLR 167 378 0 2 1367 937 287 47 27 chrX 102520369 102520813 -64129483 - L1MB3 LINE L1 -199 5984 5532 2 1367 1444 283 107 37 chrX 102520819 102521659 -64128637 - L1M2 LINE L1 -1871 4272 3373 2 1367 392 188 37 12 chrX 102521659 102521740 -64128556 - ID4 SINE ID 0 83 1 2 1367 1444 296 128 27 chrX 102521740 102522454 -64127842 - L1M2 LINE L1 -2771 3372 2526 2 1367 2867 178 59 9 chrX 102522508 102523051 -64127245 - Lx5 LINE L1 -4 7046 6477 2 1367 455 309 0 7 chrX 102525024 102525174 -64125122 - Lx8 LINE L1 -137 7336 7188 2 1367 244 316 102 0 chrX 102525670 102525768 -64124528 - PB1D10 SINE Alu -7 110 3 2 1367 313 259 68 31 chrX 102526380 102526543 -64123753 + L1MA9 LINE L1 6029 6197 -115 3 1367 567 250 0 26 chrX 102529708 102529860 -64120436 - URR1B DNA MER1_type 0 225 78 3 1367 458 254 89 27 chrX 102531156 102531302 -64118994 - URR1B DNA MER1_type -1 224 70 3 1367 510 256 16 55 chrX 102532552 102532734 -64117562 - URR1B DNA MER1_type 0 225 51 3 1367 450 0 0 0 chrX 102533524 102533574 -64116722 + (TC)n Simple_repeat Simple_repeat 2 51 0 3 1367 252 0 0 0 chrX 102533574 102533601 -64116695 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 1367 2054 291 28 11 chrX 102533940 102533979 -64116317 + Lx9 LINE L1 6370 6413 -1231 3 1367 306 0 0 0 chrX 102533979 102534013 -64116283 + (CAAAA)n Simple_repeat Simple_repeat 4 37 0 3 1367 2054 291 28 11 chrX 102534013 102534584 -64115712 + Lx9 LINE L1 6414 6990 -654 3 1367 319 338 127 0 chrX 102534591 102534727 -64115569 + MLT1F-int LTR MaLR 861 1014 -475 3 1367 489 269 0 0 chrX 102534727 102534820 -64115476 + B1_Mur2 SINE Alu 1 93 -56 3 1367 564 281 0 38 chrX 102534865 102534998 -64115298 - RSINE1 SINE B4 -36 129 2 4 1367 1231 263 27 15 chrX 102535398 102535726 -64114570 - Lx5 LINE L1 -8 7042 6711 4 1367 448 300 88 64 chrX 102540070 102540319 -64109977 + MARNA DNA Mariner 42 296 -290 4 1367 306 267 176 28 chrX 102540539 102540647 -64109649 + L2a LINE L2 3303 3426 0 4 1367 310 289 0 13 chrX 102540719 102540796 -64109500 + ID4_ SINE ID 5 80 -3 4 1367 215 250 19 0 chrX 102541322 102541374 -64108922 + (TAG)n Simple_repeat Simple_repeat 1 53 0 4 1367 237 43 42 21 chrX 102543767 102543815 -64106481 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 4 1367 878 278 4 22 chrX 102544142 102544370 -64105926 - ID_B1 SINE B4 0 224 1 4 1367 692 172 104 0 chrX 102544385 102544519 -64105777 - B1_Mur1 SINE Alu 0 149 2 4 1367 387 257 25 73 chrX 102544520 102544646 -64105650 - MIR3 SINE MIR -54 154 36 4 1367 184 194 14 127 chrX 102545797 102545868 -64104428 + L3 LINE CR1 2174 2236 -2253 5 1367 642 273 88 23 chrX 102546360 102546577 -64103719 - MLT1B LTR MaLR -3 387 173 5 1367 230 196 22 0 chrX 102546579 102546625 -64103671 + GA-rich Low_complexity Low_complexity 2 48 0 5 1367 607 246 91 23 chrX 102546625 102546800 -64103496 - MLT1B LTR MaLR -203 187 1 5 1367 345 292 62 0 chrX 102546817 102546913 -64103383 - PB1D10 SINE Alu -6 111 10 5 1367 300 283 93 19 chrX 102547122 102547284 -64103012 - L1MCa LINE L1 -2557 3764 3591 5 1367 267 255 187 7 chrX 102547325 102547475 -64102821 - L1MCa LINE L1 -2718 3603 3427 5 1367 583 250 23 11 chrX 102547597 102547838 -64102458 - L1MA4A LINE L1 -286 6014 5769 5 1367 1206 258 62 17 chrX 102547829 102548491 -64101805 - L1MCa LINE L1 -2886 3435 2744 5 1367 396 304 81 22 chrX 102548609 102548794 -64101502 - B3A SINE B2 -2 196 1 5 1367 548 281 54 105 chrX 102548797 102549518 -64100778 - L1MCa LINE L1 -4150 2358 1675 5 1367 1469 288 92 26 chrX 102549576 102550217 -64100079 - L1MCa LINE L1 -5799 709 27 5 1367 186 255 0 73 chrX 102550519 102550574 -64099722 + L2c LINE L2 3319 3369 -18 5 1367 340 365 7 26 chrX 102550662 102550814 -64099482 - L2c LINE L2 -217 3170 3022 5 1367 900 75 20 0 chrX 102551470 102551617 -64098679 + (GAAA)n Simple_repeat Simple_repeat 1 150 0 5 1367 2437 71 59 0 chrX 102552101 102552438 -64097858 + Lx LINE L1 6298 6654 0 6 1367 305 47 23 0 chrX 102553026 102553069 -64097227 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 1367 4455 49 0 9 chrX 102554516 102555070 -64095226 - L1Md_F2 LINE L1 -2 6580 6032 6 1367 492 128 0 0 chrX 102555348 102555426 -64094870 + (TA)n Simple_repeat Simple_repeat 2 79 0 6 1367 309 314 141 28 chrX 102555645 102555858 -64094438 + MIR SINE MIR 5 241 -21 6 1367 269 118 20 0 chrX 102556181 102556232 -64094064 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 1367 27 81 0 0 chrX 102558796 102558858 -64091438 + AT_rich Low_complexity Low_complexity 1 62 0 6 1367 185 396 109 6 chrX 102558907 102559072 -64091224 - L2c LINE L2 -82 3305 3124 6 1367 253 250 54 43 chrX 102560233 102560325 -64089971 - Charlie4z DNA MER1_type -33 134 42 6 1367 21 36 0 0 chrX 102563105 102563133 -64087163 + AT_rich Low_complexity Low_complexity 1 28 0 6 1367 198 0 0 0 chrX 102563739 102563761 -64086535 + (ATG)n Simple_repeat Simple_repeat 2 23 0 7 1367 273 119 0 0 chrX 102563819 102563861 -64086435 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 7 1367 235 288 0 15 chrX 102564798 102564865 -64085431 - MIR3 SINE MIR -27 181 116 7 1367 254 261 33 43 chrX 102564923 102565015 -64085281 + Charlie18a DNA MER1_type 29 119 -223 7 1367 188 263 0 0 chrX 102565616 102565654 -64084642 - MIRc SINE MIR -143 125 88 7 1367 3658 26 9 12 chrX 102566532 102566952 -64083344 - L1Md_F3 LINE L1 0 6584 6166 7 1367 4275 62 2 0 chrX 102567635 102568135 -64082161 - L1Md_F2 LINE L1 -1 6581 6081 7 1367 270 0 0 0 chrX 102568169 102568199 -64082097 + (TC)n Simple_repeat Simple_repeat 2 31 0 7 1367 351 0 0 0 chrX 102568199 102568237 -64082059 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1367 448 291 0 26 chrX 102568402 102568515 -64081781 + PB1D10 SINE Alu 1 110 -7 7 1367 811 269 68 54 chrX 102568597 102568967 -64081329 - L1MC3 LINE L1 -15 7770 7396 8 1367 200 200 0 0 chrX 102569791 102569836 -64080460 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1367 300 157 20 0 chrX 102569841 102569892 -64080404 - HAL1-3A_ME LINE L1 -831 2027 1976 8 1367 184 172 0 0 chrX 102570186 102570215 -64080081 + L3 LINE CR1 4436 4464 -25 8 1367 290 211 35 0 chrX 102571723 102571780 -64078516 + PB1 SINE Alu 21 79 -48 8 1367 272 368 0 0 chrX 102572327 102572395 -64077901 - ID4_ SINE ID 0 83 16 8 1367 300 348 73 24 chrX 102574302 102574467 -64075829 + L2b LINE L2 3185 3357 -18 8 1367 207 220 100 40 chrX 102574476 102574575 -64075721 - L2a LINE L2 -13 3413 3254 8 1367 243 0 0 0 chrX 102575214 102575241 -64075055 + (TG)n Simple_repeat Simple_repeat 1 27 0 8 1367 495 0 0 0 chrX 102575241 102575295 -64075001 + (GA)n Simple_repeat Simple_repeat 1 55 0 8 1367 191 195 0 68 chrX 102576274 102576318 -64073978 + L2c LINE L2 3103 3143 -244 9 1367 431 250 132 0 chrX 102577310 102577454 -64072842 + MER82 DNA MER2_type 196 358 -295 9 1367 565 274 98 31 chrX 102578334 102578651 -64071645 - L1MB3 LINE L1 -2 6181 5844 9 1367 230 316 12 73 chrX 102578682 102578764 -64071532 + Charlie1b DNA MER1_type 15 91 -432 9 1367 636 255 68 91 chrX 102578774 102578994 -64071302 + B3A SINE B2 2 216 0 9 1367 240 230 120 13 chrX 102579021 102579096 -64071200 + Charlie1b DNA MER1_type 109 191 -332 9 1367 6899 58 1 6 chrX 102579175 102580045 -64070251 + L1Md_F2 LINE L1 4720 5585 -298 9 1367 8188 57 16 4 chrX 102580046 102581030 -64069266 + L1Md_F2 LINE L1 5587 6582 0 9 1367 670 236 24 0 chrX 102581382 102581509 -64068787 + B1F1 SINE Alu 1 130 -19 9 1367 1573 53 10 21 chrX 102581599 102581791 -64068505 + B2_Mm1a SINE B2 2 191 -2 9 1367 474 18 0 0 chrX 102581929 102581984 -64068312 + (TG)n Simple_repeat Simple_repeat 1 55 0 9 1367 367 371 83 26 chrX 102582003 102582305 -64067991 + L3 LINE CR1 3877 4195 -294 9 1367 21 0 0 0 chrX 102582742 102582763 -64067533 + AT_rich Low_complexity Low_complexity 1 21 0 1 1367 205 241 35 0 chrX 102582800 102582858 -64067438 + MIR SINE MIR 91 150 -58 1 1367 371 271 47 0 chrX 102583204 102583289 -64067007 + MIR SINE MIR 58 146 -116 1 1367 774 212 104 16 chrX 102583307 102583489 -64066807 + ID_B1 SINE B4 3 200 -24 1 1367 190 323 48 103 chrX 102583689 102583834 -64066462 - L3 LINE CR1 -228 4261 4125 1 1367 253 313 33 42 chrX 102584172 102584292 -64066004 - L3 LINE CR1 -892 3597 3479 1 1367 243 263 52 13 chrX 102584549 102584626 -64065670 + MIR SINE MIR 169 248 -14 1 1367 254 341 77 0 chrX 102585656 102585747 -64064549 - MIRb SINE MIR -150 118 21 1 1367 340 234 104 0 chrX 102588224 102588301 -64061995 + MER58C DNA MER1_type 9 93 -122 1 1367 209 262 0 0 chrX 102589357 102589399 -64060897 + polypurine Low_complexity Low_complexity 1 42 0 1 1367 343 282 13 0 chrX 102589436 102589514 -64060782 - ID4_ SINE ID 0 83 5 1 1367 305 150 65 32 chrX 102589526 102589588 -64060708 - B1F SINE Alu -4 145 82 1 1367 285 220 35 35 chrX 102589527 102589612 -64060684 - ID_B1 SINE B4 -3 221 137 1 1367 27 49 0 0 chrX 102589613 102589654 -64060642 + AT_rich Low_complexity Low_complexity 1 41 0 1 1367 249 182 0 0 chrX 102589654 102589698 -64060598 - PB1 SINE Alu -63 64 21 1 1367 387 299 23 0 chrX 102589947 102590034 -64060262 + MER119 DNA MER1_type 7 95 -488 1 1367 417 283 9 17 chrX 102590069 102590184 -64060112 + MER119 DNA MER1_type 470 583 0 1 1367 267 291 149 13 chrX 102590197 102590338 -64059958 - MIRc SINE MIR -64 204 31 1 1367 4297 72 22 6 chrX 102590349 102590894 -64059402 - L1_Mus4 LINE L1 -4 6632 6079 1 1367 844 299 66 6 chrX 102591276 102591676 -64058620 - L1MA4 LINE L1 -110 6046 5632 1 1367 222 297 111 42 chrX 102592699 102592843 -64057453 + L2c LINE L2 3182 3335 -52 1 1367 934 146 73 25 chrX 102593118 102593322 -64056974 - RLTR12B LTR ERVK 0 528 315 1 1367 4456 80 3 11 chrX 102593352 102593918 -64056378 - L1_Mus3 LINE L1 0 6638 6077 1 1367 2554 103 0 3 chrX 102593918 102594267 -64056029 + L1_Mm LINE L1 5432 5779 -104 1 1367 3683 49 2 0 chrX 102594267 102594695 -64055601 - L1Md_F3 LINE L1 -14 6570 6142 1 1367 537 46 0 0 chrX 102594695 102594760 -64055536 - L1_Mm LINE L1 -2632 3251 3187 1 1367 911 185 145 12 chrX 102594760 102595023 -64055273 - RLTR12B LTR ERVK -270 298 1 1 1367 7637 59 9 0 chrX 102595110 102596064 -64054232 - L1Md_F2 LINE L1 -292 5591 4629 1 1367 8384 52 3 2 chrX 102596064 102597037 -64053259 + L1Md_F2 LINE L1 5593 6566 -16 1 1367 819 280 53 13 chrX 102597064 102597292 -64053004 - B4A SINE B4 -54 238 2 1 1367 23 0 0 0 chrX 102597416 102597439 -64052857 + AT_rich Low_complexity Low_complexity 1 23 0 1 1367 357 314 109 10 chrX 102597579 102597772 -64052524 + Charlie1a DNA MER1_type 3 214 -1241 1 1367 1243 56 0 0 chrX 102597864 102598008 -64052288 + B1_Mm SINE Alu 4 147 0 1 1367 486 293 25 62 chrX 102599025 102599185 -64051111 + MER117 DNA MER1_type 1 154 -43 1 1367 234 315 66 88 chrX 102599248 102599429 -64050867 + L2c LINE L2 3039 3215 -172 1 1367 383 308 56 0 chrX 102599496 102599603 -64050693 - PB1D7 SINE Alu -6 114 2 1 1367 683 266 0 90 chrX 102600078 102600256 -64050040 - RSINE1 SINE B4 -2 163 2 1 1367 369 167 147 0 chrX 102600347 102600449 -64049847 + Lx9 LINE L1 7527 7643 -1 1 1367 4031 136 3 23 chrX 102600449 102601058 -64049238 + Lx LINE L1 6058 6654 0 1 1367 5432 111 19 4 chrX 102601118 102601908 -64048388 + Lx4A LINE L1 5963 6764 -294 1 1367 369 325 229 15 chrX 102601914 102602472 -64047824 - L2a LINE L2 -30 3396 2725 1 1367 747 220 15 0 chrX 102602492 102602624 -64047672 + B1_Mur3 SINE Alu 3 136 -13 1 1367 216 0 0 0 chrX 102602624 102602648 -64047648 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 1367 781 279 57 25 chrX 102604228 102604544 -64045752 + RLTR15 LTR ERVK 21 346 -13 1 1367 251 205 277 0 chrX 102604561 102604644 -64045652 + L1_Rod LINE L1 5097 5202 -645 1 1367 1371 185 201 98 chrX 102604644 102605052 -64045244 + MT2A LTR ERVL 1 450 -83 1 1367 681 13 0 0 chrX 102605052 102605130 -64045166 + (GA)n Simple_repeat Simple_repeat 1 78 0 1 1367 1229 290 49 42 chrX 102605207 102605782 -64044514 + L1MA5 LINE L1 5352 5930 -370 1 1367 348 353 30 56 chrX 102606173 102606404 -64043892 + MIR SINE MIR 30 254 -8 1 1367 302 297 46 23 chrX 102606432 102606536 -64043760 + B1F2 SINE Alu 2 102 -47 1 1367 615 62 0 0 chrX 102606723 102606803 -64043493 + (TCCA)n Simple_repeat Simple_repeat 1 80 0 1 1367 376 343 99 54 chrX 102606809 102607142 -64043154 - L2c LINE L2 -11 3376 3029 1 1367 314 169 375 0 chrX 102607950 102608086 -64042210 + ORR1D1 LTR MaLR 1 194 -190 1 1367 411 107 0 0 chrX 102608089 102608164 -64042132 + (TC)n Simple_repeat Simple_repeat 2 76 0 1 1367 1040 195 9 44 chrX 102608165 102608390 -64041906 + ORR1D1 LTR MaLR 158 374 0 1 1367 279 326 30 44 chrX 102608503 102608638 -64041658 - MIRm SINE MIR -139 137 5 1 1367 430 306 0 84 chrX 102609626 102609757 -64040539 + B3A SINE B2 61 184 -14 1 1367 1019 259 72 75 chrX 102609955 102610001 -64040295 - ORR1D2 LTR MaLR -2 368 330 1 1367 1207 58 0 0 chrX 102610001 102610139 -64040157 + B1_Mm SINE Alu 1 138 -9 1 1367 212 0 0 35 chrX 102610139 102610168 -64040128 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 1 1367 183 42 0 0 chrX 102610171 102610195 -64040101 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 1 1367 1019 259 72 75 chrX 102610195 102610464 -64039832 - ORR1D2 LTR MaLR -41 329 50 1 1367 40 0 0 0 chrX 102610498 102610538 -64039758 + AT_rich Low_complexity Low_complexity 1 40 0 1 1367 2416 165 104 2 chrX 102610538 102611033 -64039263 - Lx3C LINE L1 -2 6974 6436 1 1367 207 174 20 61 chrX 102611674 102611723 -64038573 + MIR SINE MIR 23 69 -139 1 1367 621 0 0 0 chrX 102611743 102611812 -64038484 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 1 1367 7583 96 16 14 chrX 102611813 102612913 -64037383 - Lx3A LINE L1 -16 6965 5864 1 1367 189 0 0 0 chrX 102613203 102613224 -64037072 + (CTTG)n Simple_repeat Simple_repeat 2 22 0 1 1367 393 22 0 0 chrX 102613433 102613479 -64036817 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1367 560 244 73 32 chrX 102613970 102614190 -64036106 + L2 LINE L2 2252 2480 -939 1 1367 1282 158 84 26 chrX 102614967 102615119 -64035177 + Lx9 LINE L1 7315 7476 -168 1 1367 234 0 0 0 chrX 102615119 102615145 -64035151 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 1367 1282 158 84 26 chrX 102615145 102615303 -64034993 + Lx9 LINE L1 7477 7643 -1 1 1367 1171 54 0 13 chrX 102615863 102616012 -64034284 + B1_Mm SINE Alu 1 147 0 1 1367 430 339 8 0 chrX 102616056 102616180 -64034116 + B1F1 SINE Alu 12 136 -13 1 1367 378 0 0 0 chrX 102616180 102616222 -64034074 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1367 540 45 0 0 chrX 102616504 102616571 -64033725 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 1367 445 311 62 65 chrX 102617533 102617808 -64032488 + MTEa LTR MaLR 12 285 -94 1 1367 527 238 27 75 chrX 102617752 102617938 -64032358 + MT2A LTR ERVL 325 501 -32 1 1367 279 79 0 0 chrX 102617949 102617987 -64032309 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 1367 559 274 8 31 chrX 102618285 102618413 -64031883 + B1F SINE Alu 13 137 -12 1 1367 1110 93 0 0 chrX 102618413 102618574 -64031722 + (TAGA)n Simple_repeat Simple_repeat 2 162 0 1 1367 226 257 84 14 chrX 102618791 102618862 -64031434 + MLT1A1 LTR MaLR 4 79 -286 1 1367 1156 138 25 5 chrX 102618956 102619160 -64031136 + Lx2 LINE L1 6787 6994 -3 1 1367 419 221 49 83 chrX 102619306 102619368 -64030928 + MLT1A1 LTR MaLR 253 335 -73 1 1367 3833 46 22 14 chrX 102619368 102619857 -64030439 + MT2_Mm LTR ERVL 1 493 0 1 1367 419 202 19 75 chrX 102619857 102619922 -64030374 + MLT1A1 LTR MaLR 336 400 -8 1 1367 7329 38 40 4 chrX 102620024 102620982 -64029314 - L1Md_F3 LINE L1 -1 6583 5592 1 1367 320 214 0 20 chrX 102621068 102621168 -64029128 + Lx9 LINE L1 7538 7635 -9 1 1367 420 233 23 30 chrX 102621164 102621297 -64028999 + Lx7 LINE L1 7204 7335 -361 1 1367 2973 89 170 11 chrX 102621458 102621992 -64028304 + RLTR6_Mm LTR ERV1 1 619 -35 1 1367 1133 75 7 0 chrX 102622042 102622189 -64028107 + B1_Mus1 SINE Alu 1 148 0 1 1367 193 109 0 42 chrX 102622199 102622247 -64028049 + A-rich Low_complexity Low_complexity 2 47 0 1 1367 1502 245 72 66 chrX 102622273 102622752 -64027544 - MTC-int LTR MaLR -204 1054 477 1 1367 406 225 119 35 chrX 102622752 102622895 -64027401 - MTC-int LTR MaLR -1102 156 2 1 1367 576 0 0 0 chrX 102622937 102623001 -64027295 + (GAGAA)n Simple_repeat Simple_repeat 5 68 0 1 1367 1307 16 0 45 chrX 102623001 102623274 -64027022 + (GGGGA)n Simple_repeat Simple_repeat 1 260 0 1 1367 432 0 0 0 chrX 102623277 102623325 -64026971 + (GAAAA)n Simple_repeat Simple_repeat 1 48 0 1 1367 451 311 76 107 chrX 102623333 102623661 -64026635 - ORR1E LTR MaLR -41 318 1 1 1367 382 372 62 24 chrX 102623977 102624266 -64026030 + HAL1 LINE L1 588 887 -1620 1 1367 268 248 132 44 chrX 102624445 102624559 -64025737 + RMER1B Other Other 275 398 -668 1 1367 589 200 108 0 chrX 102624559 102624689 -64025607 + RMER1B Other Other 361 504 -562 1 1367 820 283 65 39 chrX 102624713 102624807 -64025489 + Lx8 LINE L1 7152 7245 -228 1 1367 3915 41 19 0 chrX 102624807 102625273 -64025023 + MT2C_Mm LTR ERVL 1 475 0 1 1367 820 283 65 39 chrX 102625273 102625487 -64024809 + Lx8 LINE L1 7246 7468 -5 1 1367 247 254 0 16 chrX 102625792 102625856 -64024440 + L1M3c LINE L1 5 67 -6074 1 1367 350 357 68 10 chrX 102626789 102627097 -64023199 + L1M3c LINE L1 181 506 -5635 1 1367 835 293 45 42 chrX 102627346 102627852 -64022444 + L1M3c LINE L1 830 1337 -4804 1 1367 1298 50 22 22 chrX 102628037 102628221 -64022075 - L1Md_F3 LINE L1 -3 6581 6398 1 1367 4484 166 43 6 chrX 102628268 102629170 -64021126 - L1_Mur3 LINE L1 -1307 4573 3638 1 170 4546 193 19 13 chrX 102629177 102630287 -64020009 - Lx4B LINE L1 -19 6981 5843 1 1368 3773 142 30 38 chrX 102630285 102631047 -64019249 - L1_Mur2 LINE L1 -524 5353 4598 1 1368 18506 107 180 19 chrX 102631058 102636043 -64014253 - L1_Mus1 LINE L1 -1 6566 725 1 1368 455 228 16 8 chrX 102636051 102636179 -64014117 - L1_Mus1 LINE L1 -5813 803 675 1 1368 460 284 17 81 chrX 102636203 102636494 -64013802 - L1VL1 LINE L1 -6022 400 1 1 1368 17160 157 23 6 chrX 102636494 102640153 -64010143 - L1VL4 LINE L1 -1267 4610 888 2 1368 5642 177 53 60 chrX 102640447 102640494 -64009802 + Lx6 LINE L1 4549 4592 -1288 2 1368 3413 28 3 0 chrX 102640494 102640886 -64009410 - MTA_Mm LTR MaLR -3 393 1 2 1368 5780 215 42 71 chrX 102640886 102643652 -64006644 + Lx6 LINE L1 4593 7313 -147 2 1368 1179 276 51 111 chrX 102643723 102644610 -64005686 + L1M3c LINE L1 2334 3167 -3037 1 1368 1900 131 13 100 chrX 102644617 102644998 -64005298 + ORR1B1 LTR MaLR 39 386 -8 2 1368 1516 228 58 43 chrX 102645013 102645646 -64004650 + L1M3c LINE L1 3205 3847 -2357 1 1368 192 97 0 0 chrX 102646353 102646384 -64003912 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1368 1070 149 29 38 chrX 102646405 102646615 -64003681 - ORR1D1 LTR MaLR -3 371 164 2 1368 245 276 72 39 chrX 102646529 102646710 -64003586 - RMER17D LTR ERVK -360 529 343 2 1368 927 208 78 25 chrX 102646637 102646879 -64003417 - ORR1D1 LTR MaLR -119 255 1 2 1368 1180 142 108 0 chrX 102646984 102647188 -64003108 - URR1A DNA MER1_type 0 226 1 2 1368 618 287 23 11 chrX 102647245 102647421 -64002875 + MER5A DNA MER1_type 1 178 -11 2 1368 1136 288 30 25 chrX 102647780 102648125 -64002171 + MLT1A0 LTR MaLR 1 349 -16 2 1368 3335 50 2 0 chrX 102648125 102648524 -64001772 - MTB LTR MaLR 0 400 1 2 1368 1136 288 30 25 chrX 102648524 102648541 -64001755 + MLT1A0 LTR MaLR 350 365 0 2 1368 184 200 246 0 chrX 102648775 102648840 -64001456 - L4 LINE RTE -186 1843 1763 2 1368 202 264 13 89 chrX 102648929 102649008 -64001288 - MIRb SINE MIR -161 107 35 2 1368 1680 154 3 10 chrX 102649168 102649476 -64000820 - L1_Mur2 LINE L1 -641 5236 4931 2 1368 4369 102 97 11 chrX 102649481 102650223 -64000073 - Lx3A LINE L1 -463 6518 5713 2 1368 1062 97 0 0 chrX 102650220 102650375 -63999921 + Lx3_Mus LINE L1 6537 6691 -318 2 1368 2763 66 0 16 chrX 102650372 102650742 -63999554 - L1_Mus1 LINE L1 -141 6426 6063 2 1368 2235 65 0 16 chrX 102650734 102651046 -63999250 + L1_Mus1 LINE L1 5747 6053 -514 2 1368 6234 92 9 5 chrX 102651046 102651904 -63998392 + Lx LINE L1 5792 6653 -1 2 1368 366 266 0 12 chrX 102652349 102652429 -63997867 - ID4_ SINE ID 0 83 5 2 1368 274 333 113 10 chrX 102652448 102652467 -63997829 - PB1 SINE Alu -3 124 18 2 1368 289 299 13 13 chrX 102652467 102652545 -63997751 - ID_B1 SINE B4 -48 176 99 2 1368 1191 157 175 0 chrX 102652678 102652958 -63997338 + Lx3C LINE L1 6646 6974 -2 2 1368 4903 71 42 0 chrX 102653584 102654459 -63995837 + L1VL2 LINE L1 291 1206 -2409 2 1368 1044 116 0 0 chrX 102654625 102654772 -63995524 + B1_Mus1 SINE Alu 2 148 0 2 1368 1879 151 40 14 chrX 102655341 102655691 -63994605 + RLTR15 LTR ERVK 1 359 0 2 1368 409 235 0 0 chrX 102655828 102655913 -63994383 + B4 SINE B4 11 95 -197 2 1368 296 250 0 16 chrX 102656157 102656218 -63994078 + ID4_ SINE ID 19 78 -5 2 1368 690 306 11 11 chrX 102656262 102656450 -63993846 + MLT1A LTR MaLR 178 365 -9 2 1368 270 0 0 0 chrX 102657373 102657403 -63992893 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 1368 893 183 217 0 chrX 102657493 102657668 -63992628 - B3 SINE B2 -2 214 2 2 1368 1127 248 128 38 chrX 102658683 102659135 -63991161 + RLTR12B LTR ERVK 22 514 -14 2 1368 4176 75 12 35 chrX 102659584 102660180 -63990116 - L1Md_F2 LINE L1 -12 6570 5989 2 1368 567 334 90 60 chrX 102660426 102661062 -63989234 - L2b LINE L2 -217 3158 2523 2 1368 417 39 0 0 chrX 102661138 102661189 -63989107 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1368 950 246 34 102 chrX 102661190 102661484 -63988812 - B4 SINE B4 -18 274 1 2 1368 524 288 0 9 chrX 102661491 102661603 -63988693 - PB1D10 SINE Alu -6 111 1 2 1368 461 299 0 0 chrX 102661508 102661615 -63988681 - ID_B1 SINE B4 -48 176 70 2 1368 613 193 64 36 chrX 102661756 102661896 -63988400 - LTR88b LTR Gypsy? -48 789 646 2 1368 1449 176 83 9 chrX 102661940 102662279 -63988017 + ORSL-2b DNA Tip100 97 460 -48 2 1368 249 307 53 0 chrX 102662698 102662773 -63987523 - LTR88b LTR Gypsy? -758 79 1 2 1368 379 64 0 0 chrX 102662980 102663027 -63987269 - ORR1A3 LTR MaLR -8 318 272 2 1368 1327 83 15 30 chrX 102663027 102663064 -63987232 - B2_Mm2 SINE B2 0 195 164 2 1368 4131 36 0 0 chrX 102663064 102663539 -63986757 - MT2C_Mm LTR ERVL 0 475 1 2 1368 1327 83 15 30 chrX 102663539 102663699 -63986597 - B2_Mm2 SINE B2 -32 163 1 2 1368 1957 89 10 66 chrX 102663699 102664001 -63986295 - ORR1A3 LTR MaLR -41 285 1 2 1368 1046 263 73 26 chrX 102664011 102664284 -63986012 - MTD LTR MaLR -77 342 57 2 1368 234 222 44 0 chrX 102664399 102664444 -63985852 + B4A SINE B4 2 48 -244 2 1368 212 125 69 35 chrX 102664447 102664505 -63985791 + (TATAA)n Simple_repeat Simple_repeat 5 64 0 2 1368 234 61 0 29 chrX 102664533 102664567 -63985729 + MT2A LTR ERVL 501 533 0 2 1368 1707 264 50 25 chrX 102664571 102665014 -63985282 - MT2A LTR ERVL -79 454 1 2 1368 923 276 82 26 chrX 102665018 102665249 -63985047 + B4A SINE B4 41 284 -8 2 1368 202 250 0 0 chrX 102665257 102665301 -63984995 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 2 1368 459 0 0 0 chrX 102665338 102665389 -63984907 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1368 26368 44 3 16 chrX 102666308 102670720 -63979576 - L1Md_T LINE L1 -12 6570 2220 2 1368 23176 133 18 14 chrX 102670716 102672653 -63977643 - L1VL2 LINE L1 -470 5413 3491 2 1368 414 0 0 0 chrX 102672653 102672699 -63977597 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 2 1368 23176 143 32 26 chrX 102672699 102675762 -63974534 - L1VL2 LINE L1 -2393 3490 395 2 1368 332 165 12 55 chrX 102675780 102675863 -63974433 - L1_Mur3 LINE L1 -363 3551 3472 2 1368 2683 176 83 18 chrX 102675913 102676152 -63974144 - L1_Mur3 LINE L1 -2397 3483 3205 2 1368 2679 13 0 0 chrX 102676152 102676459 -63973837 + L1Md_A LINE L1 6276 6582 0 2 1368 2683 176 83 18 chrX 102676459 102676600 -63973696 - L1_Mur3 LINE L1 -2676 3204 3065 2 1368 406 0 18 18 chrX 102676600 102676655 -63973641 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 2 1368 2683 176 83 18 chrX 102676655 102676950 -63973346 - L1_Mur3 LINE L1 -2816 3064 2766 2 1368 2041 122 7 0 chrX 102676950 102677253 -63973043 + ORR1A1 LTR MaLR 1 305 -41 2 1368 368 127 0 0 chrX 102678502 102678557 -63971739 + ORR1A1 LTR MaLR 272 326 0 2 1368 7237 160 32 31 chrX 102678557 102679294 -63971002 - L1_Mur3 LINE L1 -3113 2767 2056 2 1368 414 0 0 0 chrX 102679294 102679340 -63970956 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1368 7237 164 36 18 chrX 102679340 102681034 -63969262 - L1_Mur3 LINE L1 -3825 2055 299 2 1368 360 0 0 0 chrX 102681181 102681221 -63969075 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1368 629 313 68 111 chrX 102681638 102681990 -63968306 + MLT1L LTR MaLR 122 458 -152 2 1368 603 256 86 48 chrX 102682107 102682443 -63967853 + L1M4 LINE L1 3317 3665 -2481 2 1368 230 217 23 52 chrX 102682484 102682589 -63967707 + L1_Mur2 LINE L1 3845 3950 -1930 2 1368 2166 121 18 3 chrX 102682595 102682936 -63967360 + L1_Mus3 LINE L1 6289 6634 -4 2 1368 239 307 50 0 chrX 102683045 102683146 -63967150 + L1M4 LINE L1 4050 4155 -1991 2 1368 1011 129 0 7 chrX 102683153 102683301 -63966995 + B1_Mm SINE Alu 1 147 0 2 1368 3158 131 54 11 chrX 102683393 102683597 -63966699 - L1Md_F LINE L1 -5589 930 727 2 1368 1944 131 108 38 chrX 102683597 102684041 -63966255 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1368 3158 131 54 11 chrX 102684041 102684393 -63965903 - L1Md_F LINE L1 -5793 726 350 2 1368 4996 75 6 3 chrX 102684386 102685085 -63965211 + L1Md_F2 LINE L1 4886 5586 -297 2 1368 7598 52 21 3 chrX 102685086 102686050 -63964246 + L1Md_F2 LINE L1 5588 6568 -14 2 1368 22 35 0 0 chrX 102686050 102686079 -63964217 + AT_rich Low_complexity Low_complexity 1 29 0 2 1368 390 252 44 66 chrX 102686199 102686335 -63963961 + MLT1A0 LTR MaLR 3 135 -230 2 1368 1047 122 0 0 chrX 102686339 102686487 -63963809 + B1_Mus1 SINE Alu 1 148 0 2 1368 825 154 0 0 chrX 102686488 102686631 -63963665 + A-rich Low_complexity Low_complexity 2 144 0 2 1368 305 356 95 27 chrX 102686654 102686876 -63963420 + MLT1A0 LTR MaLR 124 360 -5 2 1368 300 254 101 8 chrX 102686877 102686996 -63963300 + L1M4 LINE L1 4372 4501 -1645 2 1368 1626 138 10 17 chrX 102687093 102687393 -63962903 + RMER4B LTR ERVK 1 298 -287 2 1368 353 125 0 35 chrX 102687393 102687451 -63962845 + RLTR13D5 LTR ERVK 1 56 -967 2 1368 557 237 184 27 chrX 102687611 102687867 -63962429 - Lx6 LINE L1 -26 7434 7139 2 1368 4083 72 2 0 chrX 102687854 102688422 -63961874 - L1_Mm LINE L1 -2971 2912 2344 2 1368 990 124 22 22 chrX 102688422 102688603 -63961693 + L1Md_F2 LINE L1 6402 6582 0 2 1368 345 284 73 0 chrX 102688670 102688779 -63961517 - Lx6 LINE L1 -344 7116 7000 2 1368 969 242 43 61 chrX 102688832 102689308 -63960988 - Lx6 LINE L1 -574 6886 6128 2 1368 376 127 0 0 chrX 102689312 102689367 -63960929 + L1_Mur3 LINE L1 1766 1820 -4060 2 1368 294 180 0 16 chrX 102689418 102689480 -63960816 + URR1B DNA MER1_type 83 143 -82 2 1368 346 307 35 47 chrX 102689560 102689731 -63960565 - HAL1b LINE L1 -5 2004 1836 2 1368 378 149 15 0 chrX 102689784 102689851 -63960445 + Lx2A1 LINE L1 5607 5674 -1334 2 1368 1076 286 94 15 chrX 102690937 102691278 -63959018 + ORR1D2 LTR MaLR 1 368 -2 2 1368 3187 259 102 73 chrX 102691280 102692807 -63957489 + ORR1D2-int LTR MaLR 1 1271 -99 2 1368 180 111 0 0 chrX 102692807 102692834 -63957462 + (CAA)n Simple_repeat Simple_repeat 1 27 0 2 1368 358 291 170 4 chrX 102692870 102693105 -63957191 - L1MDb LINE L1 -5000 1409 1136 2 1368 663 228 7 0 chrX 102693299 102693444 -63956852 - B1_Mur4 SINE Alu 0 150 5 2 1368 210 265 0 0 chrX 102695342 102695391 -63954905 + (TTG)n Simple_repeat Simple_repeat 3 51 0 2 1368 357 197 114 38 chrX 102696642 102696721 -63953575 + B4 SINE B4 2 86 -206 2 1368 1133 75 7 0 chrX 102696730 102696877 -63953419 + B1_Mus1 SINE Alu 1 148 0 2 1368 210 37 0 0 chrX 102696885 102696912 -63953384 + (TAAAA)n Simple_repeat Simple_repeat 3 29 0 2 1368 378 219 188 0 chrX 102696919 102697015 -63953281 + PB1D9 SINE Alu 1 114 -6 2 1368 325 299 22 59 chrX 102697016 102697151 -63953145 + B4 SINE B4 81 210 -82 2 1368 263 299 10 0 chrX 102697246 102697343 -63952953 + (CATA)n Simple_repeat Simple_repeat 3 100 0 2 1368 4121 137 47 5 chrX 102697674 102698418 -63951878 - L1VL4 LINE L1 -5334 968 194 2 1368 830 248 11 85 chrX 102698576 102698836 -63951460 + ORR1A4 LTR MaLR 1 241 -88 2 1368 3993 211 104 19 chrX 102698836 102700222 -63950074 + L1_Mur2 LINE L1 1013 2522 -3355 2 1368 1567 86 0 0 chrX 102700224 102700444 -63949852 - Lx4A LINE L1 -1252 5806 5587 2 1368 4373 106 21 0 chrX 102700447 102701124 -63949172 + Lx4A LINE L1 4854 5544 -333 2 1368 22659 156 43 24 chrX 102701788 102703114 -63947182 + L1_Mus1 LINE L1 384 1767 -4119 2 1368 3417 5 0 0 chrX 102703114 102703494 -63946802 + L1Md_A LINE L1 6203 6582 0 2 1368 26513 118 1 9 chrX 102703494 102703519 -63946777 + L1_Mus1 LINE L1 1753 1775 -4111 2 1368 548 240 0 53 chrX 102703519 102703651 -63946645 + B1_Mur1 SINE Alu 25 149 0 2 1368 26513 118 1 9 chrX 102703651 102705456 -63944840 + L1_Mus1 LINE L1 1776 3491 -2395 2 1368 1540 0 0 11 chrX 102705456 102705638 -63944658 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 1368 26513 98 1 4 chrX 102705638 102708725 -63941571 + L1_Mus1 LINE L1 3489 6567 0 2 1368 631 270 7 0 chrX 102709359 102709511 -63940785 - RodERV21-int LTR ERV1 -331 4660 4508 3 1368 378 279 48 32 chrX 102709766 102709955 -63940341 - RodERV21-int LTR ERV1 -1282 3709 3518 3 1368 370 348 13 13 chrX 102710444 102710677 -63939619 - RodERV21-int LTR ERV1 -3017 4074 3842 3 1368 3620 268 25 26 chrX 102711076 102712042 -63938254 - RodERV21-int LTR ERV1 -2273 2718 1754 3 1368 195 42 0 0 chrX 102712491 102712515 -63937781 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1368 4906 36 5 0 chrX 102712529 102713110 -63937186 - L1Md_F2 LINE L1 -12 6570 5987 3 1368 1203 55 0 0 chrX 102713126 102713272 -63937024 + B1_Mus2 SINE Alu 2 147 0 3 1368 1594 158 7 14 chrX 102714111 102714379 -63935917 - RMER5 LTR ERV1 -9 525 258 3 1368 234 0 0 0 chrX 102714379 102714405 -63935891 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 1368 1594 158 7 14 chrX 102714405 102714418 -63935878 - RMER5 LTR ERV1 -277 257 246 3 1368 1313 126 24 0 chrX 102714449 102714655 -63935641 - Lx3B LINE L1 -2 6971 6761 3 1368 1125 174 112 25 chrX 102714655 102714897 -63935399 - RMER5 LTR ERV1 -271 263 1 3 1368 631 244 45 34 chrX 102715135 102715313 -63934983 + B3A SINE B2 1 180 -18 3 1368 763 283 17 0 chrX 102715427 102715600 -63934696 + ID_B1 SINE B4 49 224 0 3 1368 287 231 0 0 chrX 102715606 102715658 -63934638 + B3A SINE B2 3 54 -144 3 1368 272 323 0 8 chrX 102715658 102715786 -63934510 + L1M2 LINE L1 2472 2598 -4251 3 1368 680 229 80 27 chrX 102715947 102716135 -63934161 + B3A SINE B2 1 198 0 3 1368 3628 66 0 2 chrX 102716158 102716614 -63933682 + L1_Mus1 LINE L1 6113 6567 0 3 1368 402 295 92 63 chrX 102716614 102716853 -63933443 + L1M2 LINE L1 2881 3126 -3719 3 1368 33141 59 4 5 chrX 102716853 102722019 -63928277 + L1Md_T LINE L1 446 5586 -297 3 1368 8392 36 0 0 chrX 102722019 102723011 -63927285 + L1Md_T LINE L1 5587 6578 -4 3 1368 20059 56 0 1 chrX 102723054 102725752 -63924544 + L1_Mm LINE L1 2800 5495 -388 3 1368 5868 109 1 23 chrX 102725748 102727269 -63923027 - L1Md_A LINE L1 -3777 2106 624 3 1368 479 258 91 30 chrX 102727997 102728129 -63922167 + ID_B1 SINE B4 85 224 0 3 1368 1137 253 111 39 chrX 102728137 102728599 -63921697 + L1M2 LINE L1 2484 2980 -3160 3 1368 1290 30 103 0 chrX 102728599 102728764 -63921532 - L1Md_F2 LINE L1 -10 6572 6391 3 1368 1137 253 111 39 chrX 102728764 102728925 -63921371 + L1M2 LINE L1 2981 3152 -2988 3 1368 1580 237 75 10 chrX 102729242 102729833 -63920463 + L1M2 LINE L1 3214 3843 -2300 3 1368 511 242 5 144 chrX 102729833 102730021 -63920275 + RSINE1 SINE B4 3 164 -1 3 1368 537 228 26 9 chrX 102730290 102730405 -63919891 + PB1D10 SINE Alu 1 117 0 3 1368 247 248 98 0 chrX 102730405 102730538 -63919758 + L1M2 LINE L1 4295 4440 -1700 3 1368 22 0 0 0 chrX 102730549 102730571 -63919725 + AT_rich Low_complexity Low_complexity 1 22 0 3 1368 1029 189 96 8 chrX 102730575 102730815 -63919481 + Lx5 LINE L1 6778 7038 -12 3 1368 192 307 0 0 chrX 102730824 102730899 -63919397 + G-rich Low_complexity Low_complexity 1 75 0 3 1368 733 111 24 0 chrX 102730892 102731018 -63919278 + (GGAA)n Simple_repeat Simple_repeat 4 132 0 3 1368 638 261 53 70 chrX 102731020 102731378 -63918918 + L1M2 LINE L1 4474 4825 -1318 3 1368 1845 47 4 21 chrX 102731379 102731688 -63918608 + L1_Mus1 LINE L1 6329 6567 0 3 1368 1161 285 43 7 chrX 102731831 102732269 -63918027 + L1M2 LINE L1 4818 5271 -869 3 1368 603 296 27 38 chrX 102732344 102732527 -63917769 + ID_B1 SINE B4 29 209 -15 3 1368 1898 183 11 30 chrX 102732518 102732889 -63917407 + ORR1B1 LTR MaLR 31 394 0 3 1368 399 149 23 0 chrX 102733013 102733100 -63917196 + L1M2 LINE L1 5338 5426 -886 3 1368 185 0 0 39 chrX 102733205 102733231 -63917065 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 3 1368 22 0 0 0 chrX 102733508 102733530 -63916766 + AT_rich Low_complexity Low_complexity 1 22 0 3 1368 393 295 57 0 chrX 102733541 102733646 -63916650 + PB1D10 SINE Alu 1 111 -6 3 1368 3694 67 32 54 chrX 102733646 102734174 -63916122 + L1Md_F2 LINE L1 6063 6580 -2 3 1368 1021 232 0 24 chrX 102734220 102734428 -63915868 + B3 SINE B2 1 203 -13 3 1368 432 275 0 27 chrX 102734641 102734753 -63915543 + PB1D10 SINE Alu 1 109 -8 3 1368 277 211 0 81 chrX 102734768 102734830 -63915466 + ID4_ SINE ID 3 59 -24 3 1368 204 171 24 0 chrX 102734830 102734871 -63915425 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 3 1368 21 0 0 0 chrX 102734905 102734926 -63915370 + AT_rich Low_complexity Low_complexity 1 21 0 3 1368 326 283 32 40 chrX 102735284 102735409 -63914887 - PB1 SINE Alu -3 124 1 3 1368 323 308 123 19 chrX 102735503 102735609 -63914687 + PB1 SINE Alu 6 122 -5 3 1368 1104 272 89 40 chrX 102735609 102735890 -63914406 + L1MA9 LINE L1 5443 5731 -581 3 1368 924 229 50 5 chrX 102735890 102736092 -63914204 + B3 SINE B2 5 215 -1 3 1368 1104 272 89 40 chrX 102736092 102736627 -63913669 + L1MA9 LINE L1 5732 6299 -13 3 1368 464 270 77 15 chrX 102736630 102737011 -63913285 + L1MB7 LINE L1 5043 5461 -719 3 1368 560 266 149 44 chrX 102737059 102737475 -63912821 + L1MB7 LINE L1 5613 6076 -108 3 1368 3709 53 6 2 chrX 102737628 102738123 -63912173 + L1Md_F2 LINE L1 5090 5586 -297 3 1368 8079 50 1 2 chrX 102738123 102739151 -63911145 + L1Md_F2 LINE L1 5587 6582 0 3 1368 8521 30 0 4 chrX 102739168 102740169 -63910127 + L1Md_F3 LINE L1 5587 6583 -1 3 1368 247 342 116 41 chrX 102740519 102740872 -63909424 - L2a LINE L2 -1 3425 3028 3 1368 585 0 0 0 chrX 102741014 102741079 -63909217 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 1368 230 312 0 0 chrX 102741080 102741160 -63909136 + (TA)n Simple_repeat Simple_repeat 1 80 0 3 1368 273 346 105 9 chrX 102742234 102742339 -63907957 + MIR SINE MIR 18 132 -76 3 1368 406 358 59 17 chrX 102742976 102743215 -63907081 - MIR SINE MIR 0 262 14 3 1368 249 307 62 79 chrX 102743238 102743397 -63906899 - MIRm SINE MIR -23 185 16 3 1368 471 228 30 0 chrX 102744841 102744942 -63905354 + U6 snRNA snRNA 4 107 0 3 1368 26 50 0 0 chrX 102745012 102745052 -63905244 + AT_rich Low_complexity Low_complexity 1 40 0 3 1368 924 208 63 19 chrX 102745097 102745303 -63904993 + B3 SINE B2 1 215 -1 3 1368 15837 71 5 2 chrX 102745303 102747508 -63902788 + L1Md_F2 LINE L1 3375 5585 -298 3 1368 7800 58 3 5 chrX 102747509 102748505 -63901791 + L1Md_F2 LINE L1 5587 6580 -2 3 1368 438 250 90 103 chrX 102748578 102748801 -63901495 - MER45B DNA Tip100 -112 928 709 3 1368 265 322 35 0 chrX 102748805 102748979 -63901317 + L1MD2 LINE L1 4976 5155 -991 3 1368 7496 49 10 4 chrX 102748982 102750322 -63899974 - L1Md_F2 LINE L1 -10 6572 5226 3 1368 6975 74 13 0 chrX 102750321 102751297 -63898999 + L1_Mm LINE L1 4011 4999 -884 3 1368 1314 276 25 38 chrX 102751604 102752003 -63898293 + RMER1B Other Other 1 394 -672 3 1368 1544 248 70 7 chrX 102752078 102752680 -63897616 + RMER1A Other Other 1 452 -578 3 1368 243 234 0 0 chrX 102752684 102752761 -63897535 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 3 1368 454 267 11 0 chrX 102752772 102752948 -63897348 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 3 1368 3882 172 72 11 chrX 102752980 102753766 -63896530 + RMER1A Other Other 264 1029 -1 3 1368 460 297 184 15 chrX 102753758 102754157 -63896139 + L1MD2 LINE L1 5188 5653 -706 3 1368 1443 105 50 8 chrX 102754187 102754428 -63895868 - Lx3_Mus LINE L1 -3 7006 6756 3 1368 3182 87 15 0 chrX 102754430 102754889 -63895407 + Lx3_Mus LINE L1 6287 6752 -257 3 1368 315 248 67 50 chrX 102754916 102755035 -63895261 + L1M5 LINE L1 5709 5829 -350 3 1368 252 338 13 0 chrX 102755035 102755112 -63895184 + ORR1E LTR MaLR 11 88 -271 3 1368 236 273 74 8 chrX 102755312 102755434 -63894862 + L1MD2 LINE L1 5842 5971 -388 3 1368 1527 215 50 71 chrX 102755703 102755936 -63894360 + Lx7 LINE L1 6994 7230 -466 3 1368 504 0 0 0 chrX 102755936 102755992 -63894304 + (TC)n Simple_repeat Simple_repeat 2 57 0 3 1368 1527 215 50 71 chrX 102755992 102756239 -63894057 + Lx7 LINE L1 7231 7464 -232 3 1368 1109 190 161 15 chrX 102756330 102756603 -63893693 + ORR1D1 LTR MaLR 14 326 -48 3 1368 3848 242 76 31 chrX 102756633 102758038 -63892258 - Lx7 LINE L1 -1797 5899 4402 3 1368 7233 96 9 19 chrX 102758042 102759338 -63890958 + Lx LINE L1 5371 6653 -1 3 1368 495 0 0 0 chrX 102759354 102759409 -63890887 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 3 1368 626 269 42 56 chrX 102759705 102759989 -63890307 + Lx6 LINE L1 5823 6102 -1358 3 21 226 310 62 7 chrX 102760401 102760547 -63889749 - L1MDa LINE L1 -4587 2046 1893 3 1369 378 256 73 16 chrX 102760680 102760803 -63889493 + MER5B DNA MER1_type 49 178 0 3 1369 243 310 47 45 chrX 102761369 102761521 -63888775 - MIRc SINE MIR -60 208 58 3 1369 188 184 0 26 chrX 102761627 102761666 -63888630 - L2 LINE L2 -556 2863 2826 3 1369 605 188 19 13 chrX 102762582 102762738 -63887558 - L1MC4a LINE L1 -2 7880 7724 3 1369 576 302 99 0 chrX 102762891 102763053 -63887243 + B3 SINE B2 1 181 -35 3 1369 491 31 15 0 chrX 102763053 102763118 -63887178 + (CATA)n Simple_repeat Simple_repeat 1 66 0 3 1369 576 302 99 0 chrX 102763118 102763147 -63887149 + B3 SINE B2 182 210 -6 3 1369 2566 237 13 128 chrX 102763549 102764177 -63886119 + MTC-int LTR MaLR 380 939 -319 3 1369 3628 132 22 69 chrX 102764177 102764520 -63885776 + RMER6C LTR ERVK 1 344 -346 3 1369 274 127 28 0 chrX 102764520 102764591 -63885705 + (CAGTT)n Simple_repeat Simple_repeat 1 73 0 3 1369 3628 132 22 69 chrX 102764591 102764971 -63885325 + RMER6C LTR ERVK 345 690 0 3 1369 2566 237 13 128 chrX 102764971 102765093 -63885203 + MTC-int LTR MaLR 940 1044 -214 3 1369 1438 169 71 45 chrX 102765550 102765928 -63884368 + L1_Mur2 LINE L1 4290 4677 -1200 3 1369 30186 78 7 2 chrX 102765921 102771328 -63878968 + L1Md_F2 LINE L1 158 5587 -296 3 1369 8111 43 8 2 chrX 102771329 102772317 -63877979 + L1Md_F2 LINE L1 5589 6582 0 3 1369 2173 81 7 0 chrX 102772317 102772624 -63877672 + L1Md_F2 LINE L1 5869 6177 -405 3 1369 4339 67 18 11 chrX 102772624 102773184 -63877112 - LTRIS2 LTR ERV1 0 564 1 3 1369 886 208 35 9 chrX 102773185 102773413 -63876883 - RLTR1B-int LTR ERV1 -42 5021 4788 3 1369 9256 144 64 47 chrX 102773525 102776223 -63874073 - RLTR1B-int LTR ERV1 -942 4121 760 3 1369 4285 141 27 12 chrX 102776214 102776945 -63873351 - RMER16-int LTR ERVK -3962 1444 703 3 1369 216 0 0 0 chrX 102776945 102776969 -63873327 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 3 1369 876 113 68 19 chrX 102776969 102777131 -63873165 - RMER16-int LTR ERVK -5096 310 141 3 1369 485 120 83 14 chrX 102777476 102777579 -63872717 - RLTR1B-int LTR ERV1 -3006 293 139 3 1369 4076 64 64 8 chrX 102777790 102778324 -63871972 - LTRIS2 LTR ERV1 0 564 1 3 1369 3337 47 0 0 chrX 102778324 102778729 -63871567 + L1Md_F2 LINE L1 6174 6578 -4 3 1369 605 196 0 265 chrX 102778730 102778994 -63871302 + L1Md_F2 LINE L1 436 629 -5987 3 1369 247 163 0 0 chrX 102778992 102779035 -63871261 + L1Md_F2 LINE L1 587 629 -5987 3 1369 31845 61 2 1 chrX 102779033 102783683 -63866613 + L1Md_F2 LINE L1 928 5586 -297 3 1369 7908 60 0 1 chrX 102783683 102784678 -63865618 + L1Md_F2 LINE L1 5587 6580 -2 3 1369 828 94 0 0 chrX 102784709 102784826 -63865470 + B1_Mm SINE Alu 2 118 -29 3 1369 515 242 8 15 chrX 102784712 102784842 -63865454 + ID_B1 SINE B4 86 214 -10 3 1369 11585 82 3 10 chrX 102784842 102786573 -63863723 - L1_Mm LINE L1 -2354 3529 1810 3 1369 752 167 0 0 chrX 102786573 102786687 -63863609 - B1_Mur3 SINE Alu -24 125 12 3 1369 402 202 0 113 chrX 102786594 102786700 -63863596 - MT2B LTR ERVL -344 257 164 3 1369 234 365 12 0 chrX 102786727 102786812 -63863484 - PB1D10 SINE Alu -31 86 1 3 1369 398 268 91 35 chrX 102786821 102787018 -63863278 - L1M3 LINE L1 -1138 5002 4795 3 1369 656 265 38 21 chrX 102787228 102787467 -63862829 - L1MC4a LINE L1 -266 7616 7374 4 1369 239 179 49 37 chrX 102787465 102787546 -63862750 + L1MC4 LINE L1 7140 7221 -821 4 1369 613 309 0 41 chrX 102787554 102787705 -63862591 + B3A SINE B2 10 154 -44 4 1369 411 21 0 0 chrX 102787705 102787753 -63862543 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1369 613 309 0 41 chrX 102787753 102787797 -63862499 + B3A SINE B2 155 197 -1 4 1369 453 138 0 0 chrX 102788262 102788342 -63861954 + (TG)n Simple_repeat Simple_repeat 1 80 0 4 1369 7036 79 1 2 chrX 102789449 102790426 -63859870 - L1Md_F2 LINE L1 -2 6580 5605 4 1369 408 125 0 0 chrX 102790421 102790485 -63859811 + L1_Mm LINE L1 5023 5086 -797 4 1369 3969 96 3 36 chrX 102790478 102791470 -63858826 - L1Md_A LINE L1 -4291 1592 641 4 1369 19381 166 19 87 chrX 102791479 102794103 -63856193 - Lx5 LINE L1 -1018 6032 3855 4 1369 1747 161 13 22 chrX 102794103 102794421 -63855875 - Lx LINE L1 -6 6648 6334 4 1369 19381 164 16 97 chrX 102794421 102797997 -63852299 - Lx5 LINE L1 -2032 3854 348 4 1369 888 158 53 0 chrX 102797984 102798136 -63852160 - Lx5 LINE L1 -6091 543 384 4 1369 851 94 0 8 chrX 102798137 102798265 -63852031 + (TTCC)n Simple_repeat Simple_repeat 3 129 0 4 1369 409 176 112 48 chrX 102798273 102798398 -63851898 - L1M2 LINE L1 -2912 3231 3099 4 1369 367 261 152 0 chrX 102798454 102798546 -63851750 - B1F1 SINE Alu -41 108 3 4 1369 310 336 112 0 chrX 102798546 102798561 -63851735 - ID_B1 SINE B4 -38 186 68 4 1369 517 274 9 9 chrX 102798696 102798803 -63851493 - RSINE1 SINE B4 -57 108 2 4 1369 536 259 82 28 chrX 102798803 102799085 -63851211 - L1M2 LINE L1 -3194 2949 2653 4 1369 591 78 0 0 chrX 102799099 102799189 -63851107 + (TG)n Simple_repeat Simple_repeat 1 90 0 4 1369 759 283 30 6 chrX 102799193 102799360 -63850936 - B3A SINE B2 -27 171 1 4 1369 3199 53 60 4 chrX 102799372 102799825 -63850471 - L1_Mus2 LINE L1 -331 6235 5758 4 1369 1100 248 0 0 chrX 102799869 102799931 -63850365 - L1_Rod LINE L1 -3414 2433 2372 4 1369 1141 47 0 0 chrX 102799931 102800081 -63850215 - L1Md_F2 LINE L1 0 6582 6433 4 1369 1100 248 0 0 chrX 102800081 102800280 -63850016 - L1_Rod LINE L1 -3476 2371 2173 4 1369 2465 173 61 18 chrX 102800299 102800794 -63849502 - Lx5 LINE L1 -2 7048 6533 4 1369 4128 159 65 16 chrX 102800804 102801641 -63848655 - L1_Mur2 LINE L1 -336 5541 4664 4 1369 32584 95 13 7 chrX 102801637 102808330 -63841966 - L1Md_F2 LINE L1 -3 6579 31 4 1369 4641 263 53 19 chrX 102808376 102809752 -63840544 - Lx8 LINE L1 -2 7471 6049 4 1369 220 339 39 115 chrX 102810110 102810240 -63840056 - L2c LINE L2 0 3387 3268 4 1369 33807 35 0 0 chrX 102810250 102815677 -63834619 + L1Md_Gf LINE L1 66 5589 -297 4 1369 9068 3 0 0 chrX 102815677 102816673 -63833623 + L1Md_T LINE L1 5587 6582 0 4 1369 1523 266 121 28 chrX 102816744 102817613 -63832683 + L1MB4 LINE L1 1 1035 -5572 4 1369 262 161 226 0 chrX 102817693 102817786 -63832510 + L1MB4 LINE L1 1261 1374 -5233 4 1369 261 298 0 0 chrX 102817791 102817848 -63832448 + PB1D7 SINE Alu 3 59 -61 4 1369 473 239 27 9 chrX 102817910 102818020 -63832276 + RSINE1 SINE B4 3 114 -51 4 1369 207 0 0 0 chrX 102818020 102818043 -63832253 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1369 249 284 15 0 chrX 102818122 102818189 -63832107 + ID4_ SINE ID 2 69 -14 4 1369 1078 197 4 86 chrX 102818313 102818557 -63831739 - URR1B DNA MER1_type -1 224 1 4 1369 1123 265 109 22 chrX 102818592 102818768 -63831528 + L1MB4 LINE L1 2949 3128 -3619 4 1369 267 31 0 0 chrX 102818768 102818800 -63831496 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 4 1369 1123 265 109 22 chrX 102818800 102818881 -63831415 + L1MB4 LINE L1 3129 3225 -3522 4 1369 1587 276 25 40 chrX 102818881 102819403 -63830893 - MLT2B2 LTR ERVL 0 515 2 4 1369 1123 265 109 22 chrX 102819403 102819739 -63830557 + L1MB4 LINE L1 3226 3594 -3153 4 1369 689 296 67 6 chrX 102819769 102819839 -63830457 + B3A SINE B2 2 71 -127 4 1369 459 0 0 0 chrX 102819839 102819890 -63830406 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1369 689 296 67 6 chrX 102819890 102819999 -63830297 + B3A SINE B2 72 190 -8 4 1369 254 385 0 0 chrX 102819999 102820082 -63830214 + ID4_ SINE ID 1 83 0 4 1369 644 0 0 13 chrX 102820082 102820153 -63830143 + (GAAAA)n Simple_repeat Simple_repeat 3 73 0 4 1369 1079 73 0 7 chrX 102820153 102820304 -63829992 + (GGGAA)n Simple_repeat Simple_repeat 3 152 0 4 1369 1124 226 0 0 chrX 102820333 102820541 -63829755 + B3 SINE B2 1 208 -8 4 1369 371 280 187 0 chrX 102820576 102820865 -63829431 + L1MB4 LINE L1 3654 3996 -2751 4 1369 264 172 0 0 chrX 102822408 102822466 -63827830 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 1369 264 91 0 0 chrX 102822481 102822525 -63827771 + (CAGAGA)n Simple_repeat Simple_repeat 3 46 0 4 1369 243 0 0 0 chrX 102822589 102822616 -63827680 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 4 1369 243 159 23 0 chrX 102822635 102822679 -63827617 + MT2B LTR ERVL 1 45 -556 4 1369 487 278 229 11 chrX 102822640 102822853 -63827443 + MTD LTR MaLR 6 276 -131 4 1369 198 71 0 0 chrX 102822875 102822903 -63827393 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 1369 30288 93 8 1 chrX 102822917 102826740 -63823556 - L1_Mus1 LINE L1 0 6567 2709 4 1369 1408 82 0 10 chrX 102826740 102826938 -63823358 - L1Md_F2 LINE L1 -12 6570 6375 4 1369 30288 106 13 11 chrX 102826938 102828606 -63821690 - L1_Mus1 LINE L1 -3175 2708 1073 4 1369 1557 167 7 7 chrX 102828600 102828907 -63821389 - L1_Mus1 LINE L1 -5448 1209 903 4 1369 462 273 1 33 chrX 102828962 102829140 -63821156 - L1VL1 LINE L1 -6030 392 47 4 1369 342 210 24 12 chrX 102829159 102829241 -63821055 + MTD LTR MaLR 337 419 0 4 1369 844 154 0 53 chrX 102829954 102830105 -63820191 + B1_Mur3 SINE Alu 2 144 -5 4 1369 397 205 0 16 chrX 102830118 102830247 -63820049 + (CATA)n Simple_repeat Simple_repeat 2 128 0 4 1369 1010 327 30 33 chrX 102830473 102831080 -63819216 + L1M2 LINE L1 2139 2756 -3387 4 1369 1210 94 39 11 chrX 102831080 102831262 -63819034 + B2_Mm2 SINE B2 2 188 -7 4 1369 1010 327 30 33 chrX 102831262 102831353 -63818943 + L1M2 LINE L1 2757 2835 -3308 4 1369 620 187 0 0 chrX 102831405 102831512 -63818784 - B1_Mur1 SINE Alu -3 146 40 4 1369 243 276 66 102 chrX 102831412 102831549 -63818747 - B4 SINE B4 -76 216 85 4 1369 603 312 40 12 chrX 102831563 102832044 -63818252 + L1M2 LINE L1 2879 3372 -2771 4 1369 250 187 26 13 chrX 102832145 102832221 -63818075 + L1M2 LINE L1 4719 4795 -1345 4 1369 484 289 92 0 chrX 102832351 102832493 -63817803 + RCHARR1 DNA MER1_type 201 355 -619 4 1369 3149 163 29 11 chrX 102832505 102832965 -63817331 + RLTR20B1 LTR ERVK 1 456 -107 4 1369 369 0 0 0 chrX 102832965 102833006 -63817290 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1369 2955 158 32 14 chrX 102833006 102833098 -63817198 + RLTR20B1 LTR ERVK 457 562 -1 4 1369 947 195 29 40 chrX 102833098 102833370 -63816926 + RCHARR1 DNA MER1_type 706 974 0 4 1369 730 289 83 20 chrX 102833373 102833722 -63816574 + L1M2 LINE L1 4795 5165 -981 4 1369 254 326 19 5 chrX 102833728 102833844 -63816452 + PB1 SINE Alu 1 119 -1 4 1369 773 207 21 0 chrX 102833846 102833991 -63816305 + B1_Mus1 SINE Alu 1 148 0 4 1369 3590 42 0 0 chrX 102834267 102834691 -63815605 + L1Md_F3 LINE L1 5163 5586 -297 4 1369 8594 25 2 5 chrX 102834691 102835690 -63814606 + L1Md_F3 LINE L1 5587 6582 -2 4 1369 317 140 0 17 chrX 102835694 102835752 -63814544 + L1M LINE L1 5373 5429 -749 4 1369 283 288 25 0 chrX 102835886 102835966 -63814330 + B4A SINE B4 5 86 -206 4 1369 562 372 5 0 chrX 102836027 102836215 -63814081 + B4A SINE B4 102 290 -2 4 1369 27008 142 53 35 chrX 102836325 102838732 -63811564 + Lx LINE L1 358 2938 -2945 4 1369 5692 32 0 0 chrX 102838732 102839387 -63810909 - L1Md_T LINE L1 0 6582 5928 4 1369 27008 131 21 40 chrX 102839387 102843304 -63806992 + Lx LINE L1 2939 6651 -3 4 1369 3498 45 38 0 chrX 102843306 102843726 -63806570 - RLTR10C LTR ERVK 0 436 1 4 1369 5046 35 0 75 chrX 102843726 102844397 -63805899 - MMERVK10C-int LTR ERVK 0 7581 6961 4 1369 18146 47 1 1 chrX 102844404 102846537 -63803759 - MMERVK10C-int LTR ERVK -4566 3015 883 4 1369 7868 50 5 2 chrX 102846558 102847514 -63802782 - L1Md_F2 LINE L1 -1 6581 5623 4 1369 7646 37 2 1 chrX 102847514 102848413 -63801883 - MMERVK10C-int LTR ERVK -6681 900 1 4 1369 3600 38 28 5 chrX 102848413 102848839 -63801457 - RLTR10C LTR ERVK 0 436 1 4 1369 25 0 0 0 chrX 102848977 102849002 -63801294 + AT_rich Low_complexity Low_complexity 1 25 0 4 1369 240 83 28 0 chrX 102849045 102849081 -63801215 + L1M3 LINE L1 5719 5755 -428 4 1369 482 225 104 31 chrX 102849249 102849442 -63800854 + RMER20B LTR ERVK 149 355 -272 4 1369 620 215 98 15 chrX 102849641 102849773 -63800523 + B1_Mur1 SINE Alu 2 144 -5 4 1369 327 206 49 8 chrX 102850157 102850258 -63800038 + PB1D10 SINE Alu 6 119 -8 4 1369 200 256 0 0 chrX 102850258 102850297 -63799999 + G-rich Low_complexity Low_complexity 2 40 0 4 1369 279 294 112 45 chrX 102850656 102850834 -63799462 - MIR3 SINE MIR -17 191 2 4 1369 2029 79 22 11 chrX 102850971 102851240 -63799056 - Lx4A LINE L1 -431 6627 6356 4 1369 2866 126 19 0 chrX 102851260 102851688 -63798608 + Lx4A LINE L1 6622 7057 -1 4 1369 677 306 146 62 chrX 102851722 102852175 -63798121 + MLT1G3 LTR MaLR 73 563 -16 4 1369 298 312 27 0 chrX 102852317 102852429 -63797867 + PB1D10 SINE Alu 3 117 0 4 1369 2790 57 96 0 chrX 102852542 102852926 -63797370 + L1_Mus3 LINE L1 6213 6633 -5 4 1369 549 110 0 0 chrX 102853256 102853338 -63796958 + (A)n Simple_repeat Simple_repeat 1 82 0 4 1369 1491 264 3 17 chrX 102853482 102853841 -63796455 + Lx7 LINE L1 6959 7312 -384 4 1369 522 0 0 0 chrX 102853841 102853899 -63796397 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1369 402 235 71 0 chrX 102853925 102854010 -63796286 - B1F1 SINE Alu -58 91 1 4 1369 356 302 10 0 chrX 102854095 102854191 -63796105 + PB1D10 SINE Alu 8 104 -13 4 1369 327 344 84 0 chrX 102854266 102854420 -63795876 + L2 LINE L2 1365 1531 -1888 4 1369 266 178 0 0 chrX 102854423 102854468 -63795828 + Lx9 LINE L1 6559 6603 -1041 4 1369 1782 108 17 118 chrX 102854480 102854837 -63795459 + ORR1A4 LTR MaLR 1 321 -8 4 1369 4444 183 25 24 chrX 102854840 102855719 -63794577 + Lx9 LINE L1 6638 7517 -127 4 1369 424 105 13 13 chrX 102855719 102855796 -63794500 + (TA)n Simple_repeat Simple_repeat 2 78 0 4 1369 663 164 45 28 chrX 102855797 102855973 -63794323 + Lx9 LINE L1 7465 7643 -1 4 1369 2055 175 111 51 chrX 102856170 102856493 -63793803 - RMER1C Other Other 0 1342 1001 4 1369 477 0 0 0 chrX 102856493 102856546 -63793750 + (TTCC)n Simple_repeat Simple_repeat 3 55 0 4 1369 2055 175 111 51 chrX 102856546 102856691 -63793605 - RMER1C Other Other -342 1000 846 4 1369 762 268 125 47 chrX 102857016 102857439 -63792857 - RMER13A LTR ERVK -391 469 14 4 1369 501 260 71 58 chrX 102857454 102857609 -63792687 - RMER1C Other Other -669 673 517 4 1369 532 282 7 40 chrX 102857861 102858009 -63792287 + ID_B1 SINE B4 81 223 -1 4 1369 207 100 0 0 chrX 102858370 102858400 -63791896 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 1369 213 175 0 0 chrX 102858833 102858873 -63791423 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 1369 290 342 50 0 chrX 102858929 102859049 -63791247 - L2a LINE L2 -1 3425 3300 4 1369 513 0 0 0 chrX 102860013 102860070 -63790226 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1369 219 333 0 0 chrX 102860424 102860475 -63789821 + ID_B1 SINE B4 77 127 -97 4 1369 804 116 27 74 chrX 102860940 102860964 -63789332 + B1_Mur3 SINE Alu 1 24 -125 4 1369 1489 38 0 5 chrX 102860964 102861151 -63789145 - L1Md_F2 LINE L1 -12 6570 6385 5 1369 804 116 27 74 chrX 102861151 102861185 -63789111 + B1_Mur3 SINE Alu 25 53 -96 4 1369 996 159 0 0 chrX 102861185 102861361 -63788935 + (CAGAGA)n Simple_repeat Simple_repeat 1 176 0 5 1369 804 116 27 74 chrX 102861361 102861450 -63788846 + B1_Mur3 SINE Alu 54 140 -9 4 1369 405 0 0 0 chrX 102861451 102861496 -63788800 + (GA)n Simple_repeat Simple_repeat 1 45 0 5 1369 368 281 71 12 chrX 102861561 102861730 -63788566 - L3 LINE CR1 -759 3730 3552 5 1369 3114 298 52 26 chrX 102861738 102862923 -63787373 + Lx8 LINE L1 6165 7380 -93 5 1369 363 125 0 0 chrX 102862926 102862998 -63787298 + (GGA)n Simple_repeat Simple_repeat 2 73 0 5 1369 779 0 0 11 chrX 102862998 102863090 -63787206 + (GGAGA)n Simple_repeat Simple_repeat 4 94 0 5 1369 295 324 0 0 chrX 102863224 102863298 -63786998 + ID_B1 SINE B4 77 150 -74 5 1369 396 290 28 9 chrX 102863234 102863342 -63786954 + PB1D10 SINE Alu 6 115 -2 5 1369 906 215 75 5 chrX 102863677 102863878 -63786418 - B3 SINE B2 0 216 2 5 1369 267 31 0 0 chrX 102864356 102864388 -63785908 + (TTA)n Simple_repeat Simple_repeat 2 33 0 5 1369 695 218 0 26 chrX 102864388 102864539 -63785757 - B1_Mur2 SINE Alu -2 147 1 5 1369 221 0 0 33 chrX 102865316 102865346 -63784950 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1369 377 250 23 0 chrX 102865357 102865445 -63784851 + PB1D10 SINE Alu 20 109 -8 5 1369 24 0 0 0 chrX 102865542 102865566 -63784730 + AT_rich Low_complexity Low_complexity 1 24 0 5 1369 579 234 16 8 chrX 102865572 102865701 -63784595 + ID_B1 SINE B4 89 218 -6 5 1369 267 352 0 9 chrX 102865757 102865863 -63784433 - MIR SINE MIR -85 177 73 5 1369 262 211 289 0 chrX 102866261 102866337 -63783959 - PB1D10 SINE Alu -5 112 15 5 1369 468 0 0 0 chrX 102866653 102866705 -63783591 + (GA)n Simple_repeat Simple_repeat 2 53 0 5 1369 283 238 0 0 chrX 102867494 102867557 -63782739 + tRNA-Ala-GCY_ tRNA tRNA 4 66 -9 5 1369 327 155 24 12 chrX 102867572 102867657 -63782639 + (CA)n Simple_repeat Simple_repeat 1 86 0 5 1369 230 75 0 48 chrX 102867924 102867966 -63782330 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 5 1369 810 280 66 12 chrX 102868199 102868456 -63781840 - MLT1H2 LTR MaLR -218 271 1 5 1369 809 227 66 0 chrX 102868667 102868865 -63781431 + L1MC2 LINE L1 5869 6079 -265 5 1369 299 307 47 52 chrX 102868873 102869045 -63781251 + MLT1H2 LTR MaLR 316 486 -3 5 1369 189 0 0 0 chrX 102869456 102869477 -63780819 + (TTC)n Simple_repeat Simple_repeat 3 23 0 5 1369 1034 130 6 0 chrX 102869477 102869654 -63780642 + (TCC)n Simple_repeat Simple_repeat 3 180 0 5 1369 3665 155 0 115 chrX 102871379 102871631 -63778665 + L1Md_F3 LINE L1 5280 5455 -431 5 1369 201 39 0 0 chrX 102871631 102871657 -63778639 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 5 1369 8210 44 1 2 chrX 102871657 102872810 -63777486 + L1Md_F3 LINE L1 5452 6584 0 5 1369 6627 42 2 1 chrX 102872810 102873603 -63776693 + L1Md_F2 LINE L1 5788 6581 -1 5 1369 370 260 12 2 chrX 102873750 102873855 -63776441 - B4 SINE B4 -10 282 172 5 1369 237 273 26 0 chrX 102873865 102873942 -63776354 + L2 LINE L2 2797 2875 -544 5 1369 1152 257 42 111 chrX 102874920 102875297 -63774999 + MTE2b LTR MaLR 27 377 -2 5 1369 1152 62 0 14 chrX 102875892 102876039 -63774257 - B1_Mus2 SINE Alu -1 146 2 5 1369 646 200 77 24 chrX 102876415 102876584 -63773712 - RMER15 LTR ERVL -37 538 361 5 1369 1051 255 87 30 chrX 102877792 102878127 -63772169 + Lx8 LINE L1 7118 7471 -2 5 1369 263 214 107 48 chrX 102878191 102878294 -63772002 - MLT1A0 LTR MaLR -52 313 205 5 1369 1204 152 177 29 chrX 102878295 102878606 -63771690 + ORR1A4 LTR MaLR 2 321 -8 5 1369 255 320 0 29 chrX 102879647 102879750 -63770546 + MIRc SINE MIR 120 219 -49 5 1369 245 175 0 0 chrX 102879763 102879803 -63770493 + ID4 SINE ID 21 60 -23 5 1369 405 0 0 0 chrX 102879803 102879848 -63770448 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1369 452 320 0 8 chrX 102880511 102880640 -63769656 + Lx8 LINE L1 7135 7262 -211 5 1369 321 118 0 0 chrX 102881372 102881423 -63768873 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 5 1369 1108 206 22 6 chrX 102881574 102882009 -63768287 - RMER19C LTR ERVK 0 611 16 5 1369 794 176 7 27 chrX 102882212 102882358 -63767938 - B1_Mur1 SINE Alu -1 148 6 5 1369 284 269 8 100 chrX 102882253 102882373 -63767923 - MT2B LTR ERVL -338 263 155 5 1369 567 218 68 62 chrX 102882394 102882571 -63767725 - B3A SINE B2 -3 213 36 5 1369 477 0 0 0 chrX 102882578 102882631 -63767665 + (TC)n Simple_repeat Simple_repeat 1 53 0 5 1369 725 33 11 0 chrX 102883694 102883786 -63766510 + (TTTTG)n Simple_repeat Simple_repeat 3 95 0 5 1369 970 0 0 0 chrX 102883786 102883904 -63766392 - B1_Mus1 SINE Alu -11 137 20 5 1369 577 143 27 0 chrX 102884136 102884248 -63766048 + CT-rich Low_complexity Low_complexity 2 116 0 5 1369 285 329 0 0 chrX 102884296 102884378 -63765918 - ID2 SINE ID -1 82 1 5 1369 378 61 0 0 chrX 102884381 102884430 -63765866 + (TTTTC)n Simple_repeat Simple_repeat 2 50 0 5 1369 34992 40 1 3 chrX 102884476 102890680 -63759616 - L1Md_T LINE L1 0 6585 298 5 1369 800 241 46 31 chrX 102890714 102890975 -63759321 - L1M2 LINE L1 -2406 3737 3473 5 1369 238 268 0 0 chrX 102890983 102891039 -63759257 - L1M2 LINE L1 -2003 4140 4085 5 1369 545 163 26 12 chrX 102891039 102891152 -63759144 - MTD LTR MaLR 0 419 276 5 1369 283 243 67 13 chrX 102891152 102891227 -63759069 + L1_Mur3 LINE L1 2608 2686 -3194 5 1369 298 194 14 43 chrX 102891227 102891297 -63758999 - MTD LTR MaLR -126 281 214 5 1369 238 200 49 16 chrX 102891333 102891394 -63758902 - L1_Mur2 LINE L1 -2302 3575 3513 5 171 489 289 40 108 chrX 102891472 102891580 -63758716 - L1M2 LINE L1 -2484 3363 3272 5 1370 1385 119 62 0 chrX 102891580 102891824 -63758472 - Lx LINE L1 0 6654 6396 5 1370 734 289 40 108 chrX 102891824 102892141 -63758155 - L1M2 LINE L1 -2856 3287 2967 5 1370 2872 38 12 3 chrX 102892357 102892700 -63757596 - ORR1A1 LTR MaLR 0 346 1 5 1370 227 163 0 0 chrX 102892737 102892780 -63757516 + Lx5 LINE L1 7008 7050 0 5 1370 819 282 156 26 chrX 102892890 102893499 -63756797 - L1M2 LINE L1 -3174 2969 2282 5 1370 223 80 39 20 chrX 102893542 102893593 -63756703 + (TTGG)n Simple_repeat Simple_repeat 4 55 0 5 1370 1184 68 0 0 chrX 102893593 102893739 -63756557 - B1_Mus2 SINE Alu 0 147 2 5 1370 8413 35 10 5 chrX 102893747 102895098 -63755198 - L1Md_F2 LINE L1 0 6582 5224 5 1370 349 90 2 0 chrX 102895356 102895414 -63754882 - B1_Mur4 SINE Alu 0 150 59 5 1370 198 0 0 0 chrX 102895657 102895679 -63754617 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 5 1370 8129 60 1 7 chrX 102896430 102897448 -63752848 + L1Md_F2 LINE L1 4573 5584 -299 5 1370 8595 30 0 3 chrX 102897450 102898437 -63751859 + L1Md_F2 LINE L1 5587 6570 -12 5 1370 183 42 0 0 chrX 102898440 102898464 -63751832 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1370 722 245 26 0 chrX 102898565 102898720 -63751576 + B3 SINE B2 54 212 -4 5 1370 639 48 0 0 chrX 102898723 102898806 -63751490 + (CTTTG)n Simple_repeat Simple_repeat 2 84 0 5 1370 998 143 0 0 chrX 102898811 102898958 -63751338 - B1_Mus1 SINE Alu 0 148 2 5 1370 2587 109 25 2 chrX 102899088 102899482 -63750814 + Lx LINE L1 6249 6651 -3 5 1370 260 297 89 48 chrX 102899522 102899646 -63750650 + B1F1 SINE Alu 1 129 -20 5 1370 2454 126 16 8 chrX 102899761 102900138 -63750158 + RLTR14 LTR ERV1 1 380 -2 5 1370 736 220 44 28 chrX 102900219 102900401 -63749895 - B3 SINE B2 -2 214 30 5 1370 180 77 0 0 chrX 102900483 102900509 -63749787 + (A)n Simple_repeat Simple_repeat 1 26 0 5 1370 921 259 153 53 chrX 102901270 102901629 -63748667 + MTD LTR MaLR 8 402 -17 5 1370 627 213 51 7 chrX 102903185 102903322 -63746974 - B1_Mur1 SINE Alu -2 147 5 5 1370 388 188 0 101 chrX 102903956 102904045 -63746251 - ID4 SINE ID -1 82 3 5 1370 237 135 0 0 chrX 102904100 102904152 -63746144 + (A)n Simple_repeat Simple_repeat 1 52 0 5 1370 920 141 4 162 chrX 102904540 102904719 -63745577 + URR1A DNA MER1_type 35 186 -40 5 1370 5095 144 1 3 chrX 102904719 102905501 -63744795 - Lx LINE L1 -5 6649 5869 5 1370 920 141 4 162 chrX 102905501 102905549 -63744747 + URR1A DNA MER1_type 187 226 0 5 1370 332 104 0 15 chrX 102906219 102906287 -63744009 + (TTTTTG)n Simple_repeat Simple_repeat 1 67 0 5 1370 293 193 17 6 chrX 102906685 102906755 -63743541 - PB1D7 SINE Alu 0 120 52 5 1370 1045 234 64 48 chrX 102906768 102907082 -63743214 + MTD LTR MaLR 88 406 -13 5 1370 305 278 103 17 chrX 102907172 102907289 -63743007 - MER92C LTR ERV1 -427 127 1 5 1370 207 0 0 0 chrX 102907343 102907366 -63742930 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1370 253 262 73 27 chrX 102907805 102907915 -63742381 - MER102b DNA MER1_type -225 116 2 5 1370 213 319 14 0 chrX 102908497 102908569 -63741727 + ID4_ SINE ID 2 74 -9 5 1370 187 271 193 40 chrX 102910070 102910220 -63740076 - MIRb SINE MIR -46 222 50 5 1370 472 241 18 9 chrX 102910613 102910722 -63739574 + B1F SINE Alu 29 138 -11 5 1370 295 319 0 50 chrX 102910728 102910789 -63739507 + polypurine Low_complexity Low_complexity 2 59 0 5 1370 1148 84 0 0 chrX 102910789 102910932 -63739364 + B1_Mus1 SINE Alu 2 144 -4 5 1370 918 62 0 0 chrX 102910933 102911063 -63739233 + (GA)n Simple_repeat Simple_repeat 1 130 0 5 1370 295 319 0 50 chrX 102911063 102911118 -63739178 + polypurine Low_complexity Low_complexity 60 114 0 5 1370 204 125 0 0 chrX 102911878 102911910 -63738386 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 1370 714 159 224 0 chrX 102911926 102912096 -63738200 - B3 SINE B2 -4 212 5 5 1370 348 250 32 11 chrX 102912202 102912295 -63738001 + PB1D7 SINE Alu 17 111 -9 5 1370 375 271 41 10 chrX 102912577 102912674 -63737622 + PB1D10 SINE Alu 17 116 -1 6 1370 252 253 160 32 chrX 102912806 102912900 -63737396 - PB1D10 SINE Alu -11 106 1 6 1370 275 310 61 26 chrX 102912900 102913023 -63737273 - PB1D10 SINE Alu -18 131 1 6 1370 746 265 6 0 chrX 102913072 102913234 -63737062 + B3 SINE B2 4 166 -50 6 1370 368 225 118 44 chrX 102913220 102913355 -63736941 + B3 SINE B2 71 215 -1 6 1370 282 294 39 0 chrX 102913382 102913484 -63736812 + ID4 SINE ID 2 107 -45 6 1370 334 232 146 10 chrX 102913524 102913620 -63736676 + PB1 SINE Alu 5 113 -14 6 1370 342 0 0 0 chrX 102915230 102915268 -63735028 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1370 384 260 15 11 chrX 102915428 102915529 -63734767 + B1F2 SINE Alu 1 105 -15 6 1370 339 254 15 0 chrX 102915530 102915597 -63734699 + ID4_ SINE ID 12 79 -4 6 1370 243 309 42 11 chrX 102915531 102915626 -63734670 + RSINE1 SINE B4 14 111 -54 6 1370 1680 296 21 32 chrX 102917456 102918011 -63732285 + Lx7 LINE L1 6805 7339 -134 6 1370 186 43 0 0 chrX 102918011 102918034 -63732262 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 6 1370 845 301 68 95 chrX 102918034 102918154 -63732142 + Lx7 LINE L1 7340 7472 -1 6 1370 360 226 200 21 chrX 102918187 102918327 -63731969 + B3A SINE B2 34 198 0 6 1370 471 48 0 0 chrX 102918327 102918389 -63731907 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 1370 471 264 9 0 chrX 102918398 102918508 -63731788 - B3A SINE B2 -60 138 28 6 1370 852 169 0 7 chrX 102918596 102918733 -63731563 + B1_Mur2 SINE Alu 2 137 -12 6 1370 777 22 0 0 chrX 102918733 102918824 -63731472 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 6 1370 1065 30 0 0 chrX 102919044 102919177 -63731119 + (CA)n Simple_repeat Simple_repeat 1 133 0 6 1370 567 0 0 0 chrX 102919862 102919925 -63730371 + (GA)n Simple_repeat Simple_repeat 1 63 0 6 1370 2157 110 6 18 chrX 102920073 102920416 -63729880 - MTC LTR MaLR 0 421 83 6 1370 489 159 23 0 chrX 102920923 102921011 -63729285 - MTC LTR MaLR -315 106 17 6 1370 252 333 0 0 chrX 102921447 102921525 -63728771 + LTR82A LTR ERVL 220 297 -575 6 1370 376 284 95 0 chrX 102921529 102921645 -63728651 + RSINE1 SINE B4 6 132 -33 6 1370 3652 40 0 0 chrX 102921735 102922164 -63728132 - L1Md_T LINE L1 0 6582 6154 6 1370 243 0 0 0 chrX 102922205 102922232 -63728064 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 1370 576 243 34 137 chrX 102922232 102922398 -63727898 - B3 SINE B2 -32 184 39 6 1370 2241 41 0 4 chrX 102922398 102922668 -63727628 - L1Md_F2 LINE L1 -3 6579 6311 6 1370 576 243 34 137 chrX 102922668 102922706 -63727590 - B3 SINE B2 -178 38 1 6 1370 234 0 0 0 chrX 102922831 102922857 -63727439 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 6 1370 761 174 15 0 chrX 102922864 102922996 -63727300 - B1_Mur1 SINE Alu -15 134 1 6 1370 747 125 22 0 chrX 102923109 102923245 -63727051 + (GGAA)n Simple_repeat Simple_repeat 4 142 0 6 1370 584 289 12 6 chrX 102923476 102923636 -63726660 + ID_B1 SINE B4 1 161 -63 6 1370 276 232 60 12 chrX 102923569 102923652 -63726644 + B1F2 SINE Alu 14 100 -49 6 1370 237 65 0 0 chrX 102924268 102924299 -63725997 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1370 374 287 17 25 chrX 102924437 102924555 -63725741 + PB1D10 SINE Alu 1 117 0 6 1370 309 250 49 12 chrX 102924885 102924966 -63725330 + B3 SINE B2 129 212 -4 6 1370 395 248 50 0 chrX 102924995 102925096 -63725200 + PB1D10 SINE Alu 1 106 -11 6 1370 341 275 92 0 chrX 102925579 102925688 -63724608 + PB1D7 SINE Alu 1 119 -1 6 1370 725 201 45 0 chrX 102925780 102925914 -63724382 + B3 SINE B2 4 143 -73 6 1370 399 319 64 19 chrX 102925948 102926136 -63724160 - MIRb SINE MIR -22 246 48 6 1370 373 239 51 68 chrX 102926145 102926262 -63724034 - PB1D10 SINE Alu -1 116 2 6 1370 447 240 10 0 chrX 102926302 102926402 -63723894 - PB1 SINE Alu -10 117 17 6 1370 600 14 0 0 chrX 102926634 102926703 -63723593 + (TC)n Simple_repeat Simple_repeat 2 70 0 6 1370 663 282 0 41 chrX 102927535 102927616 -63722680 + RSINE1 SINE B4 1 81 -84 6 1370 2703 147 29 0 chrX 102927616 102928025 -63722271 - MTC LTR MaLR 0 421 1 6 1370 663 282 0 41 chrX 102928025 102928113 -63722183 + RSINE1 SINE B4 82 163 -2 6 1370 435 327 97 67 chrX 102928167 102928436 -63721860 + B4 SINE B4 6 282 -10 6 1370 702 190 14 35 chrX 102928648 102928790 -63721506 + B1_Mur3 SINE Alu 5 143 -6 6 1370 549 44 0 0 chrX 102928794 102928862 -63721434 + (GGGA)n Simple_repeat Simple_repeat 1 68 0 6 1370 25 31 0 0 chrX 102928893 102928925 -63721371 + AT_rich Low_complexity Low_complexity 1 32 0 6 1370 590 287 0 7 chrX 102929009 102929153 -63721143 + B1_Mur1 SINE Alu 2 144 -5 6 1370 267 31 0 0 chrX 102929153 102929185 -63721111 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 6 1370 549 0 0 0 chrX 102929955 102930016 -63720280 + (TC)n Simple_repeat Simple_repeat 2 62 0 6 1370 406 253 0 0 chrX 102930025 102930112 -63720184 - PB1D10 SINE Alu -8 109 23 6 1370 2194 95 3 41 chrX 102930114 102930221 -63720075 + ORR1A2 LTR MaLR 1 106 -221 6 1370 2356 72 0 25 chrX 102930221 102930552 -63719744 + L1_Mus1 LINE L1 6263 6567 0 6 1370 2194 95 3 41 chrX 102930552 102930784 -63719512 + ORR1A2 LTR MaLR 107 327 0 6 1370 509 176 93 0 chrX 102931035 102931143 -63719153 + B1_Mur3 SINE Alu 12 129 -20 6 1370 236 338 14 0 chrX 102931291 102931365 -63718931 + PB1D10 SINE Alu 14 88 -29 6 1370 281 308 122 0 chrX 102931629 102931736 -63718560 - PB1D7 SINE Alu 0 120 1 6 1370 236 333 0 100 chrX 102931821 102931870 -63718426 + ID SINE ID 44 81 -143 6 1370 283 246 0 0 chrX 102931870 102931935 -63718361 + PB1D10 SINE Alu 1 65 -52 6 1370 36084 36 0 0 chrX 102931966 102937217 -63713079 + L1Md_T LINE L1 242 5589 -297 6 1370 9109 8 0 0 chrX 102937217 102938213 -63712083 + L1Md_T LINE L1 5590 6585 0 6 1370 23281 22 0 0 chrX 102938229 102940907 -63709389 + L1Md_T LINE L1 2909 5586 -297 6 1370 9109 8 0 0 chrX 102940907 102941903 -63708393 + L1Md_T LINE L1 5587 6582 0 6 1370 16982 20 0 0 chrX 102942664 102944597 -63705699 + L1Md_T LINE L1 3654 5586 -297 6 1370 9171 5 0 0 chrX 102944597 102945593 -63704703 + L1Md_T LINE L1 5587 6582 0 6 1370 187 233 47 0 chrX 102945698 102945741 -63704555 - MIR3 SINE MIR -13 195 151 6 1370 458 291 90 57 chrX 102945744 102945988 -63704308 + Charlie16a DNA MER1_type 8 259 -83 6 1370 218 56 28 0 chrX 102946031 102946067 -63704229 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1370 780 256 102 88 chrX 102946098 102946178 -63704118 - B4A SINE B4 -4 288 224 6 1370 840 209 115 6 chrX 102946178 102946361 -63703935 - B3 SINE B2 -13 203 1 6 1370 780 256 102 88 chrX 102946361 102946563 -63703733 - B4A SINE B4 -69 223 2 6 1370 423 250 11 0 chrX 102946574 102946662 -63703634 - PB1D7 SINE Alu -8 112 24 6 1370 201 94 0 0 chrX 102946701 102946733 -63703563 + (A)n Simple_repeat Simple_repeat 1 32 0 6 1370 402 21 0 0 chrX 102947037 102947084 -63703212 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1370 262 196 237 11 chrX 102947198 102947291 -63703005 + B1F2 SINE Alu 26 139 -10 6 1370 215 160 0 39 chrX 102948068 102948120 -63702176 + G-rich Low_complexity Low_complexity 4 53 0 6 1370 329 233 27 0 chrX 102948155 102948228 -63702068 - ID4 SINE ID -1 82 8 6 1370 416 273 98 29 chrX 102948335 102948539 -63701757 + MIR SINE MIR 33 250 -12 6 1370 266 144 10 91 chrX 102948772 102948871 -63701425 + T-rich Low_complexity Low_complexity 3 93 0 6 1370 1010 127 0 32 chrX 102948873 102949028 -63701268 - B1_Mur4 SINE Alu 0 150 1 6 1370 219 215 157 97 chrX 102949038 102949172 -63701124 - B2_Mm2 SINE B2 -9 186 45 6 1370 553 280 37 37 chrX 102949253 102949416 -63700880 + RSINE1 SINE B4 3 165 0 6 1370 276 100 0 0 chrX 102949489 102949529 -63700767 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 6 1370 225 194 202 61 chrX 102949537 102949636 -63700660 - MIRb SINE MIR -34 234 122 6 1370 279 246 14 14 chrX 102949862 102949932 -63700364 + ID4 SINE ID 13 82 -1 6 1370 271 289 247 0 chrX 102949939 102950105 -63700191 + MIRb SINE MIR 53 259 -9 6 1370 283 186 136 0 chrX 102950404 102950463 -63699833 + ID4_ SINE ID 2 68 -15 6 1370 262 259 0 0 chrX 102950510 102950568 -63699728 - PB1D10 SINE Alu -9 108 51 6 1370 273 266 58 66 chrX 102950880 102951017 -63699279 - B1F SINE Alu -10 139 4 6 1370 211 257 305 0 chrX 102951201 102951306 -63698990 + MIRc SINE MIR 49 185 -83 6 1370 352 343 14 28 chrX 102951382 102951526 -63698770 + RSINE1 SINE B4 15 156 -9 6 1370 29 0 0 0 chrX 102951526 102951555 -63698741 + AT_rich Low_complexity Low_complexity 1 29 0 6 1370 885 188 0 0 chrX 102951764 102951913 -63698383 + B1_Mur2 SINE Alu 1 149 0 6 1370 492 193 110 0 chrX 102952037 102952146 -63698150 - B3 SINE B2 0 216 96 6 1370 746 169 0 0 chrX 102952317 102952441 -63697855 + B1_Mus2 SINE Alu 7 130 -17 6 1370 1417 269 63 16 chrX 102952505 102953170 -63697126 + L1_Mur3 LINE L1 17 688 -7040 6 1370 2885 175 27 6 chrX 102953167 102954087 -63696209 + L1_Mur3 LINE L1 859 1792 -4088 6 1370 11460 150 34 67 chrX 102954079 102956032 -63694264 + L1_Mur3 LINE L1 3350 5324 -556 6 1370 507 175 136 0 chrX 102956032 102956135 -63694161 + B3 SINE B2 14 130 -86 6 1370 11460 150 34 67 chrX 102956135 102956350 -63693946 + L1_Mur3 LINE L1 5325 5543 -337 6 1370 3537 187 79 0 chrX 102956351 102956994 -63693302 + Lx6 LINE L1 6759 7452 -8 6 1370 409 301 26 26 chrX 102957299 102957415 -63692881 - PB1D10 SINE Alu -1 116 1 6 1370 235 259 173 0 chrX 102957449 102957530 -63692766 - PB1D10 SINE Alu -22 95 1 6 1370 564 250 46 118 chrX 102957608 102957803 -63692493 - B3A SINE B2 -10 185 5 6 1370 933 134 206 6 chrX 102957823 102958003 -63692293 - B3 SINE B2 0 216 1 6 1370 181 209 23 0 chrX 102958093 102958136 -63692160 - L2a LINE L2 -24 3402 3359 6 1370 200 35 35 0 chrX 102959761 102959790 -63690506 + (CGAG)n Simple_repeat Simple_repeat 1 30 0 6 1370 23 0 0 0 chrX 102959797 102959820 -63690476 + GC_rich Low_complexity Low_complexity 1 23 0 7 1370 39 22 0 0 chrX 102959833 102959879 -63690417 + GC_rich Low_complexity Low_complexity 1 46 0 7 1370 860 121 7 0 chrX 102961278 102961419 -63688877 + (GAAA)n Simple_repeat Simple_repeat 3 144 0 7 1370 477 0 0 0 chrX 102961813 102961866 -63688430 + (TG)n Simple_repeat Simple_repeat 1 53 0 7 1370 230 0 33 0 chrX 102964036 102964066 -63686230 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 7 1370 306 107 0 0 chrX 102964161 102964217 -63686079 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 7 1370 1075 57 43 0 chrX 102964217 102964358 -63685938 - B1_Mm SINE Alu 0 147 1 7 1370 382 286 0 0 chrX 102964375 102964466 -63685830 - PB1D10 SINE Alu -13 104 14 7 1370 219 295 0 60 chrX 102964401 102964476 -63685820 - B4A SINE B4 -134 158 89 7 1370 468 0 0 0 chrX 102964476 102964528 -63685768 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 1370 329 310 16 66 chrX 102964535 102964656 -63685640 - PB1D10 SINE Alu 0 117 3 7 1370 650 222 7 7 chrX 102964734 102964870 -63685426 - RSINE1 SINE B4 -27 138 3 7 1370 222 305 0 21 chrX 102964918 102965015 -63685281 + GA-rich Low_complexity Low_complexity 5 99 0 7 1370 333 227 79 11 chrX 102965047 102965136 -63685160 - RSINE1 SINE B4 -68 97 3 7 1370 321 333 97 14 chrX 102965580 102965796 -63684500 - L3 LINE CR1 -717 3772 3539 7 1370 373 316 27 67 chrX 102965913 102966062 -63684234 + RSINE1 SINE B4 6 148 -17 7 1370 423 0 0 0 chrX 102966428 102966475 -63683821 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1370 681 174 0 0 chrX 102966531 102966640 -63683656 - RSINE1 SINE B4 -17 148 40 7 1370 303 215 63 42 chrX 102967513 102967608 -63682688 + ID4 SINE ID 1 96 -56 7 1370 187 342 54 14 chrX 102967632 102967706 -63682590 - MIR SINE MIR -97 165 89 7 1370 40 21 0 0 chrX 102970118 102970165 -63680131 + AT_rich Low_complexity Low_complexity 1 47 0 7 1370 294 98 0 0 chrX 102970965 102971016 -63679280 + (T)n Simple_repeat Simple_repeat 1 51 0 7 1370 300 183 27 40 chrX 102971369 102971443 -63678853 + ID4_ SINE ID 10 82 -1 7 1370 408 248 67 0 chrX 102971889 102971994 -63678302 - PB1D10 SINE Alu -3 114 3 7 1370 380 284 34 17 chrX 102972057 102972175 -63678121 - PB1D7 SINE Alu 0 120 1 7 1370 559 37 24 12 chrX 102972209 102972291 -63678005 + (GTTTG)n Simple_repeat Simple_repeat 2 84 0 7 1370 493 319 0 7 chrX 102972291 102972427 -63677869 - ID_B1 SINE B4 -8 216 82 7 1370 396 59 0 0 chrX 102972475 102972526 -63677770 + (TATG)n Simple_repeat Simple_repeat 4 54 0 7 1370 572 271 8 0 chrX 102972557 102972686 -63677610 - RSINE1 SINE B4 -35 130 1 7 1370 298 268 0 0 chrX 102973593 102973664 -63676632 + L3 LINE CR1 4337 4407 -82 7 1370 450 0 0 0 chrX 102973953 102974003 -63676293 + (TTA)n Simple_repeat Simple_repeat 2 51 0 7 1370 813 192 73 58 chrX 102974284 102974453 -63675843 - B3 SINE B2 -1 215 43 7 1370 2851 132 26 2 chrX 102974453 102974908 -63675388 + RMER4A LTR ERVK 1 466 0 7 1370 813 192 73 58 chrX 102974908 102974943 -63675353 - B3 SINE B2 -174 42 8 7 1370 313 280 45 27 chrX 102974946 102975056 -63675240 - MLT1A1 LTR MaLR -2 406 295 7 1370 462 226 19 10 chrX 102975276 102975379 -63674917 - PB1D10 SINE Alu -1 116 13 7 1370 243 0 0 0 chrX 102976796 102976823 -63673473 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 1370 363 145 24 12 chrX 102976829 102976913 -63673383 + (TA)n Simple_repeat Simple_repeat 2 86 0 7 1370 441 301 75 63 chrX 102976946 102977201 -63673095 - B4 SINE B4 -27 265 8 7 1370 400 269 0 36 chrX 102977671 102977783 -63672513 - Charlie1a DNA MER1_type -310 1145 1038 7 1370 227 278 0 0 chrX 102977777 102977831 -63672465 - Charlie1a DNA MER1_type -1401 54 1 7 1370 1549 261 67 26 chrX 102978086 102978696 -63671600 - L1MB4 LINE L1 -2 6178 5517 7 1370 591 209 0 0 chrX 102978729 102978839 -63671457 - PB1D10 SINE Alu -7 110 1 7 1370 233 245 77 58 chrX 102978843 102978947 -63671349 - L1MB4 LINE L1 -655 5523 5418 7 1370 497 211 24 9 chrX 102978952 102979074 -63671222 - L1MA7 LINE L1 -22 6290 6170 7 1370 231 36 0 0 chrX 102979074 102979102 -63671194 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 7 1370 292 254 124 164 chrX 102979102 102979125 -63671171 - L1MA7 LINE L1 -143 6169 6168 7 1370 1178 62 0 0 chrX 102979125 102979270 -63671026 - B1_Mus1 SINE Alu 0 148 4 7 1370 292 254 124 164 chrX 102979270 102979339 -63670957 - L1MA7 LINE L1 -145 6167 6107 7 1370 1102 203 10 10 chrX 102979339 102979548 -63670748 - B3 SINE B2 -7 209 1 7 1370 347 246 187 94 chrX 102979548 102979741 -63670555 - L1MA7 LINE L1 -175 6116 5908 7 1370 1187 61 0 7 chrX 102979741 102979889 -63670407 + B1_Mus1 SINE Alu 2 148 0 7 1370 347 245 191 90 chrX 102979889 102979984 -63670312 - L1MA7 LINE L1 -378 5913 5811 7 1370 693 206 13 52 chrX 102979984 102980138 -63670158 + B1_Mur1 SINE Alu 2 149 0 7 1370 327 326 27 54 chrX 102980363 102980548 -63669748 - L1MA7 LINE L1 -496 5804 5625 7 1370 318 50 0 0 chrX 102980552 102980592 -63669704 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1370 387 0 0 0 chrX 102980592 102980634 -63669662 + (GA)n Simple_repeat Simple_repeat 1 43 0 7 1370 276 351 9 9 chrX 102980658 102980773 -63669523 - PB1D10 SINE Alu -1 116 2 7 1370 732 167 79 0 chrX 102980802 102980928 -63669368 - B1_Mur1 SINE Alu -5 144 9 7 1370 332 289 101 88 chrX 102980805 102980953 -63669343 - B4 SINE B4 -74 218 69 7 1370 324 205 10 137 chrX 102980953 102981055 -63669241 - L1MA7 LINE L1 -709 5582 5494 7 1370 550 284 84 9 chrX 102981092 102981326 -63668970 - B4 SINE B4 -2 290 39 7 1370 215 333 13 39 chrX 102981552 102981630 -63668666 - ID4_ SINE ID 0 83 8 7 1370 428 286 0 1 chrX 102981637 102981782 -63668514 - L1MA7 LINE L1 -815 5331 5188 7 1370 290 237 26 13 chrX 102981834 102981911 -63668385 - ID_B1 SINE B4 -4 220 143 7 1370 1913 237 15 54 chrX 102981996 102982452 -63667844 - L1MA7 LINE L1 -1011 5132 4676 7 1370 340 260 0 0 chrX 102982452 102982525 -63667771 + ID4 SINE ID 1 73 -10 7 1370 542 82 0 12 chrX 102982528 102982614 -63667682 + (TCTA)n Simple_repeat Simple_repeat 2 86 0 7 1370 1913 237 15 54 chrX 102982614 102982692 -63667604 - L1MA7 LINE L1 -1468 4675 4615 7 1370 707 180 0 0 chrX 102982695 102982823 -63667473 + B1_Mur2 SINE Alu 21 148 -1 7 1370 692 199 28 0 chrX 102982830 102982971 -63667325 - L1MA7 LINE L1 -1538 4605 4461 7 1370 332 245 59 30 chrX 102983072 102983173 -63667123 - PB1D10 SINE Alu -3 114 11 7 1370 372 199 45 2 chrX 102983222 102983323 -63666973 - PB1D10 SINE Alu -27 122 14 7 1370 225 132 0 0 chrX 102983347 102983385 -63666911 - L1M4 LINE L1 -898 5248 5211 7 1370 220 292 28 0 chrX 102983389 102983461 -63666835 + CT-rich Low_complexity Low_complexity 1 74 0 7 1370 264 262 16 0 chrX 102983471 102983532 -63666764 - BC1_Mm scRNA scRNA -90 62 1 7 1370 543 289 7 0 chrX 102983569 102983704 -63666592 - B1F SINE Alu -10 139 4 7 1370 834 236 109 31 chrX 102983725 102983854 -63666442 - L1M4 LINE L1 -975 5171 5019 7 1370 2516 86 3 0 chrX 102983854 102984180 -63666116 - ORR1A2 LTR MaLR 0 327 1 7 1370 834 236 109 31 chrX 102984180 102984343 -63665953 - L1M4 LINE L1 -1128 5018 4856 7 1370 248 284 0 0 chrX 102984354 102984421 -63665875 + ID4 SINE ID 17 83 0 7 1370 4853 122 17 18 chrX 102984741 102985524 -63664772 - Lx2B LINE L1 -3 6997 6216 7 1370 426 328 16 0 chrX 102986155 102986280 -63664016 - B4A SINE B4 -95 197 71 7 1370 507 302 14 10 chrX 102986313 102986397 -63663899 + B4 SINE B4 2 90 -134 7 1370 430 152 140 19 chrX 102986397 102986504 -63663792 + PB1D9 SINE Alu 1 120 0 7 1370 591 210 43 7 chrX 102986521 102986660 -63663636 + B1F SINE Alu 1 144 -5 7 1370 902 78 8 0 chrX 102987212 102987341 -63662955 - L1_Mus2 LINE L1 -1 6565 6436 7 1370 585 156 27 9 chrX 102987499 102987609 -63662687 - PB1D9 SINE Alu -7 113 2 7 1370 228 290 0 16 chrX 102987700 102987763 -63662533 + MLT1K LTR MaLR 519 580 -15 7 1370 371 275 22 0 chrX 102987784 102987875 -63662421 - B3A SINE B2 -104 94 2 7 1370 258 239 14 14 chrX 102987879 102987951 -63662345 - PB1D10 SINE Alu -24 93 22 7 1370 315 230 0 26 chrX 102988063 102988139 -63662157 + PB1 SINE Alu 50 123 -4 7 1370 647 209 215 0 chrX 102988706 102988883 -63661413 - B3 SINE B2 0 216 2 7 1370 421 276 26 8 chrX 102990940 102991057 -63659239 + PB1D7 SINE Alu 2 120 0 7 1370 360 0 0 0 chrX 102992110 102992150 -63658146 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1370 230 312 65 0 chrX 102992236 102992313 -63657983 - MARNA DNA Mariner -216 370 289 7 1370 207 0 0 0 chrX 102992481 102992504 -63657792 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 7 1370 213 254 18 0 chrX 102994330 102994385 -63655911 + GA-rich Low_complexity Low_complexity 2 57 0 7 1370 269 26 26 0 chrX 102998156 102998194 -63652102 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 7 1370 285 317 0 68 chrX 102998857 102998945 -63651351 - PB1 SINE Alu -28 99 18 7 1370 499 227 131 0 chrX 102999456 102999590 -63650706 - ID_B1 SINE B4 0 224 76 7 1370 180 0 0 0 chrX 102999656 102999676 -63650620 + (TTA)n Simple_repeat Simple_repeat 2 21 0 7 1370 396 0 0 0 chrX 102999677 102999721 -63650575 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 1370 499 232 7 74 chrX 102999750 102999885 -63650411 - RSINE1 SINE B4 -37 128 3 7 1370 277 211 195 13 chrX 102999914 102999991 -63650305 - B3A SINE B2 -23 175 85 7 1370 213 209 0 23 chrX 103000017 103000061 -63650235 - B2_Mm2 SINE B2 -151 44 2 1 1370 421 254 0 26 chrX 103000210 103000323 -63649973 + PB1D10 SINE Alu 1 110 -7 2 1370 21 0 0 0 chrX 103000453 103000474 -63649822 + AT_rich Low_complexity Low_complexity 1 21 0 3 1370 874 208 50 34 chrX 103002027 103002206 -63648090 - B3 SINE B2 -4 212 31 4 1370 21 0 0 0 chrX 103002683 103002704 -63647592 + AT_rich Low_complexity Low_complexity 1 21 0 5 1370 638 153 369 0 chrX 103002848 103003005 -63647291 + URR1B DNA MER1_type 2 216 -9 6 1370 287 257 14 0 chrX 103003197 103003267 -63647029 + B4 SINE B4 5 75 -217 7 1370 491 290 73 78 chrX 103003336 103003617 -63646679 + B4A SINE B4 1 292 0 8 1370 1023 51 29 0 chrX 103004833 103004970 -63645326 - L1Md_F2 LINE L1 -14 6568 6428 9 1370 214 319 76 20 chrX 103005852 103005984 -63644312 + MIRc SINE MIR 22 163 -105 1 1370 252 391 14 35 chrX 103006011 103006154 -63644142 + L2 LINE L2 1992 2131 -1288 1 1370 331 225 62 0 chrX 103006291 103006371 -63643925 - BC1_Mm scRNA scRNA -61 91 7 1 1370 354 45 0 0 chrX 103006502 103006546 -63643750 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1370 1204 14 28 0 chrX 103006673 103006816 -63643480 + B1_Mm SINE Alu 1 147 0 1 1370 795 283 70 35 chrX 103006925 103007181 -63643115 - B4A SINE B4 -27 265 1 1 1370 457 292 43 17 chrX 103007332 103007447 -63642849 + B1_Mur1 SINE Alu 1 118 -31 1 1370 356 299 123 23 chrX 103007447 103007461 -63642835 + B4 SINE B4 86 227 -65 1 1370 254 392 27 0 chrX 103007851 103007925 -63642371 - PB1D10 SINE Alu -40 77 2 1 1370 238 291 0 86 chrX 103008907 103009035 -63641261 + PB1D7 SINE Alu 1 117 -3 1 1370 1638 217 76 26 chrX 103010415 103010798 -63639498 + MTD LTR MaLR 14 415 -4 2 1370 429 317 13 27 chrX 103010802 103010951 -63639345 + B1F SINE Alu 3 149 0 2 1370 948 54 139 0 chrX 103011498 103011627 -63638669 + B1_Mus2 SINE Alu 1 147 0 2 1370 1153 89 0 0 chrX 103011647 103011805 -63638491 + B2_Mm2 SINE B2 1 158 -37 2 1370 585 0 0 0 chrX 103011806 103011871 -63638425 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 2 1370 242 229 43 0 chrX 103012156 103012226 -63638070 + A-rich Low_complexity Low_complexity 6 78 0 2 1370 23 33 0 0 chrX 103012267 103012297 -63637999 + AT_rich Low_complexity Low_complexity 1 30 0 2 1370 618 230 67 0 chrX 103012809 103012974 -63637322 - L1M3 LINE L1 -643 5546 5371 2 1370 318 261 52 35 chrX 103014356 103014471 -63635825 - PB1D10 SINE Alu 0 117 1 2 1370 24 53 0 0 chrX 103015008 103015046 -63635250 + AT_rich Low_complexity Low_complexity 1 38 0 2 1370 24 0 0 0 chrX 103015126 103015150 -63635146 + AT_rich Low_complexity Low_complexity 1 24 0 3 1370 904 200 44 0 chrX 103015221 103015401 -63634895 + U2 snRNA snRNA 1 188 0 3 1370 418 320 72 11 chrX 103015444 103015722 -63634574 + L1M5 LINE L1 5475 5769 -410 3 1370 624 246 7 28 chrX 103015768 103015910 -63634386 - B1_Mur1 SINE Alu -7 142 4 3 1370 22 35 0 0 chrX 103016027 103016056 -63634240 + AT_rich Low_complexity Low_complexity 1 29 0 3 1370 630 241 41 0 chrX 103016311 103016456 -63633840 + RSINE1 SINE B4 9 159 -6 3 1370 22 0 0 0 chrX 103016461 103016483 -63633813 + AT_rich Low_complexity Low_complexity 1 22 0 3 1370 239 255 147 52 chrX 103016495 103016603 -63633693 + PB1D10 SINE Alu 2 120 -29 3 1370 430 319 114 42 chrX 103016603 103016770 -63633526 + ID_B1 SINE B4 4 182 -42 3 1370 348 241 123 15 chrX 103016806 103016989 -63633307 + B4 SINE B4 5 242 -50 3 1370 233 359 0 0 chrX 103017927 103018005 -63632291 - ID4_ SINE ID -1 82 5 4 1370 328 342 90 31 chrX 103018069 103018550 -63631746 + L1MB8 LINE L1 5651 6174 -10 4 1370 707 207 73 0 chrX 103019811 103019961 -63630335 + RSINE1 SINE B4 1 161 -4 4 1370 503 253 58 64 chrX 103020019 103020192 -63630104 + MTEa LTR MaLR 202 373 -6 4 1370 3703 67 53 4 chrX 103020192 103020684 -63629612 + L1Md_F2 LINE L1 6064 6579 -3 4 1370 201 336 112 50 chrX 103020849 103021109 -63629187 + L2 LINE L2 2362 2637 -782 4 1370 341 282 0 0 chrX 103021124 103021195 -63629101 + B1_Mus1 SINE Alu 26 96 -52 4 1370 186 71 0 0 chrX 103021393 103021421 -63628875 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 1371 282 241 145 65 chrX 103022685 103022809 -63627487 - RSINE1 SINE B4 -28 137 4 4 1371 659 219 80 30 chrX 103023496 103023658 -63626638 - ID_B1 SINE B4 -60 232 69 4 1371 318 26 0 0 chrX 103023884 103023923 -63626373 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1371 482 224 148 47 chrX 103024268 103024437 -63625859 - B3 SINE B2 -12 186 1 5 1371 22 56 0 0 chrX 103024536 103024572 -63625724 + AT_rich Low_complexity Low_complexity 1 36 0 5 1371 27 0 0 0 chrX 103024849 103024876 -63625420 + AT_rich Low_complexity Low_complexity 1 27 0 5 1371 255 170 0 0 chrX 103026370 103026417 -63623879 + GA-rich Low_complexity Low_complexity 2 48 0 5 1371 345 287 81 0 chrX 103026822 103026958 -63623338 + L1MC4a LINE L1 7724 7870 -12 5 1371 340 212 97 39 chrX 103026966 103027069 -63623227 - PB1D7 SINE Alu -10 110 2 5 1371 655 259 52 26 chrX 103027100 103027294 -63623002 - ID_B1 SINE B4 -25 199 1 5 1371 352 294 94 14 chrX 103027533 103027671 -63622625 + B1F2 SINE Alu 1 149 0 5 1371 289 308 58 0 chrX 103028158 103028262 -63622034 - PB1D10 SINE Alu -1 116 7 5 1371 1496 181 8 43 chrX 103028553 103028905 -63621391 + Lx2 LINE L1 1818 2157 -3729 6 1371 8839 145 25 12 chrX 103028944 103030696 -63619600 + Lx2 LINE L1 4346 6101 -896 6 1371 729 227 0 0 chrX 103030865 103031006 -63619290 - B1_Mm SINE Alu -5 142 2 6 1371 835 209 4 24 chrX 103031016 103031219 -63619077 - B3 SINE B2 -1 194 3 6 1371 258 119 0 0 chrX 103031369 103031411 -63618885 + B1_Mur4 SINE Alu 104 145 -5 6 1371 1228 34 0 0 chrX 103032018 103032165 -63618131 - B1_Mus1 SINE Alu 0 148 2 6 1371 437 262 9 9 chrX 103032351 103032459 -63617837 + PB1D10 SINE Alu 1 108 -9 6 1371 502 309 84 39 chrX 103033027 103033182 -63617114 - RSINE1 SINE B4 -2 163 2 6 1371 181 0 69 0 chrX 103034602 103034631 -63615665 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 1371 521 264 0 0 chrX 103034697 103034803 -63615493 - PB1D9 SINE Alu -12 108 3 6 1371 450 53 0 0 chrX 103034840 103034897 -63615399 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 6 1371 209 209 0 43 chrX 103035319 103035389 -63614907 + A-rich Low_complexity Low_complexity 6 72 0 7 1371 318 191 43 7 chrX 103035617 103035717 -63614579 + B1_Mur3 SINE Alu 15 142 -7 7 1371 1176 29 0 0 chrX 103036224 103036363 -63613933 + B1_Mus1 SINE Alu 2 140 -8 7 1371 302 45 0 22 chrX 103036363 103036408 -63613888 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 7 1371 252 269 0 49 chrX 103037226 103037308 -63612988 + PB1D10 SINE Alu 37 114 -3 7 1371 21 0 0 0 chrX 103037373 103037394 -63612902 + AT_rich Low_complexity Low_complexity 1 21 0 7 1371 925 268 5 23 chrX 103037403 103037617 -63612679 + B3 SINE B2 3 212 -4 7 1371 1199 55 0 0 chrX 103037701 103037847 -63612449 - B1_Mus1 SINE Alu -2 146 1 7 1371 201 154 0 0 chrX 103037903 103037942 -63612354 + GA-rich Low_complexity Low_complexity 2 40 0 7 1371 2163 63 55 7 chrX 103038120 103038409 -63611887 + L1Md_F2 LINE L1 6263 6565 -17 7 1371 222 265 23 57 chrX 103038813 103038901 -63611395 + B2_Mm2 SINE B2 1 85 -110 8 1371 495 0 0 0 chrX 103038929 103038984 -63611312 + (CA)n Simple_repeat Simple_repeat 2 56 0 8 1371 232 383 21 11 chrX 103039090 103039185 -63611111 - RSINE1 SINE B4 -61 104 9 8 1371 214 295 0 82 chrX 103039180 103039220 -63611076 - PB1D10 SINE Alu -22 95 18 8 1371 236 244 0 0 chrX 103039220 103039265 -63611031 - ID_B1 SINE B4 -81 143 99 8 1371 482 300 14 28 chrX 103039323 103039467 -63610829 + ID_B1 SINE B4 24 165 -59 8 1371 1425 83 0 5 chrX 103039535 103039729 -63610567 - B2_Mm2 SINE B2 0 195 3 8 1371 744 196 0 20 chrX 103040612 103040763 -63609533 - B1_Mus1 SINE Alu 0 148 1 8 1371 24 0 0 0 chrX 103041320 103041344 -63608952 + AT_rich Low_complexity Low_complexity 1 24 0 8 1371 466 207 93 29 chrX 103041665 103041804 -63608492 - Lx9 LINE L1 -9 7635 7488 8 1371 221 158 0 0 chrX 103042199 103042237 -63608059 - B3A SINE B2 -160 38 1 9 1371 256 402 0 0 chrX 103042764 103042856 -63607440 + L2b LINE L2 3244 3335 -40 9 1371 231 342 103 26 chrX 103043489 103043606 -63606690 + PB1 SINE Alu 2 127 0 9 1371 331 282 13 0 chrX 103044144 103044222 -63606074 + MLT1E LTR MaLR 3 81 -599 9 1371 389 329 101 65 chrX 103044313 103044619 -63605677 + MLT1E LTR MaLR 313 629 -24 9 1371 842 181 0 0 chrX 103045079 103045217 -63605079 - B1_Mur4 SINE Alu 0 150 13 9 1371 422 265 26 99 chrX 103045082 103045233 -63605063 - B4 SINE B4 -69 223 84 9 1371 267 299 88 83 chrX 103045635 103045828 -63604468 + B3 SINE B2 6 199 -17 9 1371 207 203 0 0 chrX 103045833 103045892 -63604404 + (CA)n Simple_repeat Simple_repeat 2 60 0 9 1371 336 296 137 29 chrX 103045976 103046115 -63604181 + RSINE1 SINE B4 12 165 0 9 1371 201 210 0 0 chrX 103046538 103046600 -63603696 + CT-rich Low_complexity Low_complexity 2 63 0 9 1371 227 322 145 24 chrX 103046770 103047066 -63603230 + L1M3 LINE L1 5324 5655 -513 1 1371 234 0 0 0 chrX 103047160 103047186 -63603110 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1371 248 383 18 36 chrX 103047756 103047867 -63602429 + ID_B1 SINE B4 96 204 -20 1 1371 320 307 170 7 chrX 103048149 103048290 -63602006 - RSINE1 SINE B4 0 165 2 1 1371 467 343 0 21 chrX 103048431 103048574 -63601722 - RSINE1 SINE B4 -23 142 3 1 1371 357 75 0 0 chrX 103048823 103048876 -63601420 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1371 235 292 14 0 chrX 103048898 103048970 -63601326 + ID_B1 SINE B4 70 142 -82 1 1371 381 185 12 34 chrX 103048915 103048991 -63601305 + B1_Mur2 SINE Alu 7 82 -68 1 1371 459 0 0 0 chrX 103048991 103049042 -63601254 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1371 368 246 8 92 chrX 103049042 103049095 -63601201 + B1_Mur3 SINE Alu 82 125 -24 1 1371 1603 223 85 21 chrX 103049736 103050125 -63600171 + MTD LTR MaLR 6 419 0 1 1371 250 283 25 66 chrX 103050341 103050462 -63599834 + L1MC4a LINE L1 6819 6934 -948 1 1371 447 210 267 18 chrX 103050505 103050757 -63599539 - L1MA5 LINE L1 -117 6183 5851 1 1371 596 206 37 0 chrX 103053056 103053163 -63597133 - PB1D9 SINE Alu -7 113 3 1 1371 1139 141 0 6 chrX 103053200 103053378 -63596918 + B2_Mm2 SINE B2 1 177 -18 1 1371 402 79 0 0 chrX 103053378 103053441 -63596855 + (GAAA)n Simple_repeat Simple_repeat 4 66 0 1 1371 570 299 52 37 chrX 103054734 103054925 -63595371 + B3A SINE B2 5 198 0 1 1371 269 269 104 21 chrX 103054954 103055006 -63595290 + ORR1B1-int LTR MaLR 584 647 -862 1 1371 743 108 18 9 chrX 103055006 103055118 -63595178 + B1_Mm SINE Alu 1 113 -34 1 1371 402 209 62 104 chrX 103055118 103055146 -63595150 + MT2B LTR ERVL 158 291 -310 1 1371 288 53 0 0 chrX 103056220 103056258 -63594038 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1371 180 0 0 0 chrX 103056816 103056836 -63593460 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1371 1190 54 0 0 chrX 103056836 103056983 -63593313 - B1_Mus2 SINE Alu 0 147 1 1 1371 270 274 0 124 chrX 103057299 103057420 -63592876 + MT2B LTR ERVL 152 257 -344 1 1371 462 210 10 10 chrX 103057322 103057423 -63592873 + B1_Mus1 SINE Alu 6 106 -42 1 1371 279 237 121 48 chrX 103057329 103057453 -63592843 + ID_B1 SINE B4 92 224 0 1 1371 494 194 29 88 chrX 103057530 103057541 -63592755 + MT2B LTR ERVL 152 276 -322 1 1371 739 180 0 0 chrX 103057541 103057663 -63592633 + B1_Mur3 SINE Alu 1 122 -27 1 1371 877 118 47 0 chrX 103057783 103057943 -63592353 + B2_Mm2 SINE B2 1 199 -17 1 1371 192 77 0 0 chrX 103057945 103057971 -63592325 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 1 1371 936 47 0 16 chrX 103058585 103058714 -63591582 - B1_Mus2 SINE Alu 0 147 21 1 1371 1299 62 40 0 chrX 103058733 103058910 -63591386 + B2_Mm2 SINE B2 2 185 -10 1 1371 647 180 50 35 chrX 103059805 103059973 -63590323 + B2_Mm2 SINE B2 2 179 -37 1 1371 414 0 0 0 chrX 103059980 103060026 -63590270 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1371 389 282 0 35 chrX 103060125 103060198 -63590098 + PB1D9 SINE Alu 11 82 -38 1 1371 219 36 0 0 chrX 103060198 103060226 -63590070 + (TCTA)n Simple_repeat Simple_repeat 4 31 0 1 1371 389 282 0 35 chrX 103060226 103060266 -63590030 + PB1D9 SINE Alu 83 120 0 1 1371 261 173 18 0 chrX 103060580 103060630 -63589666 - B1_Mus2 SINE Alu -7 142 89 1 1371 201 176 0 0 chrX 103060662 103060696 -63589600 + A-rich Low_complexity Low_complexity 1 34 0 1 1371 21 82 0 0 chrX 103062669 103062718 -63587578 + AT_rich Low_complexity Low_complexity 1 49 0 1 1371 1101 68 0 20 chrX 103062723 103062873 -63587423 + B1_Mus2 SINE Alu 1 147 0 1 1371 243 308 38 13 chrX 103063777 103063856 -63586440 + ID4 SINE ID 3 83 0 1 1371 481 227 46 15 chrX 103063875 103064005 -63586291 + L1ME2z LINE L1 6123 6256 -188 1 1371 582 86 0 0 chrX 103064205 103064286 -63586010 + (TC)n Simple_repeat Simple_repeat 2 82 0 1 1371 283 333 12 0 chrX 103064340 103064421 -63585875 + PB1D10 SINE Alu 1 82 -35 1 1371 695 210 21 7 chrX 103064421 103064565 -63585731 + B1F2 SINE Alu 2 147 -2 1 1371 547 271 76 16 chrX 103064577 103064761 -63585535 + B3A SINE B2 1 195 -3 1 1371 248 193 0 76 chrX 103064939 103065022 -63585274 + ID2 SINE ID 2 74 -9 1 1371 309 300 179 24 chrX 103065178 103065301 -63584995 - B1F1 SINE Alu -5 144 3 1 1371 437 261 33 16 chrX 103065444 103065565 -63584731 - B1F SINE Alu -21 128 6 1 1371 319 337 11 74 chrX 103065565 103065633 -63584663 - ID_B1 SINE B4 -21 203 27 1 1371 334 271 126 44 chrX 103066384 103066519 -63583777 + B1_Mur1 SINE Alu 4 149 0 1 1371 887 263 0 49 chrX 103066552 103066756 -63583540 + B3 SINE B2 2 195 -21 1 1371 483 128 0 0 chrX 103066873 103066959 -63583337 + (CA)n Simple_repeat Simple_repeat 1 86 0 1 1371 201 175 0 0 chrX 103066961 103067001 -63583295 + GA-rich Low_complexity Low_complexity 3 42 0 1 1371 1122 123 58 0 chrX 103067924 103068095 -63582201 + B2_Mm2 SINE B2 1 181 -14 1 1371 1060 59 171 0 chrX 103068284 103068436 -63581860 + B2_Mm1t SINE B2 2 179 -14 1 1371 1396 85 16 0 chrX 103068436 103068625 -63581671 + B2_Mm2 SINE B2 2 193 -2 1 1371 21 0 0 0 chrX 103068779 103068800 -63581496 + AT_rich Low_complexity Low_complexity 1 21 0 1 1371 461 208 0 45 chrX 103069162 103069273 -63581023 + U6 snRNA snRNA 1 106 -1 1 1371 28 29 0 0 chrX 103069482 103069517 -63580779 + AT_rich Low_complexity Low_complexity 1 35 0 1 1371 421 179 40 50 chrX 103073131 103073231 -63577065 + B3A SINE B2 2 100 -98 1 1371 568 269 0 25 chrX 103073384 103073506 -63576790 + B1_Mur3 SINE Alu 4 122 -27 1 1371 468 121 0 0 chrX 103073507 103073598 -63576698 + (TAAA)n Simple_repeat Simple_repeat 1 91 0 1 1371 200 291 95 52 chrX 103074144 103074260 -63576036 - MIRc SINE MIR -132 136 16 1 1371 482 248 171 0 chrX 103074546 103074663 -63575633 - B1_Mur2 SINE Alu -12 137 1 1 1371 634 255 7 0 chrX 103075626 103075771 -63574525 - B1F1 SINE Alu -1 148 3 1 1371 297 250 29 0 chrX 103076323 103076391 -63573905 - B3A SINE B2 -128 70 1 1 1371 511 243 0 0 chrX 103076498 103076605 -63573691 + PB1 SINE Alu 14 120 -7 1 1371 267 281 118 7 chrX 103076605 103076634 -63573662 + B4A SINE B4 99 249 -43 1 1371 1409 79 21 0 chrX 103080461 103080650 -63569646 + B2_Mm2 SINE B2 1 193 -2 1 1371 1260 179 5 0 chrX 103081189 103081413 -63568883 + URR1B DNA MER1_type 1 225 0 1 1371 1155 119 23 0 chrX 103081858 103082035 -63568261 + B2_Mm2 SINE B2 1 181 -14 1 1371 376 90 370 0 chrX 103082103 103082199 -63568097 + B2_Mm2 SINE B2 47 181 -14 1 1371 1672 21 0 0 chrX 103083376 103083565 -63566731 + B2_Mm1t SINE B2 1 189 -4 1 1371 1316 70 26 21 chrX 103084073 103084263 -63566033 + B2_Mm1t SINE B2 2 192 -1 1 1371 559 204 104 15 chrX 103084953 103085087 -63565209 - B1_Mur1 SINE Alu 0 149 4 1 1371 1212 114 11 0 chrX 103085393 103085568 -63564728 + B2_Mm1t SINE B2 3 179 -14 1 1371 343 127 11 17 chrX 103085651 103085720 -63564576 + B2_Mm2 SINE B2 47 118 -98 1 1371 210 71 0 0 chrX 103085732 103085760 -63564536 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1 1371 573 285 0 14 chrX 103086373 103086519 -63563777 + B1F2 SINE Alu 6 149 0 1 1371 204 40 0 0 chrX 103086607 103086632 -63563664 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1371 633 165 0 0 chrX 103086632 103086735 -63563561 - B1_Mur4 SINE Alu 0 150 48 1 1371 557 281 71 5 chrX 103086803 103087000 -63563296 + B3 SINE B2 1 210 -6 1 1371 559 239 286 15 chrX 103087002 103087541 -63562755 + L1M4 LINE L1 3072 3756 -2390 1 1371 433 256 20 89 chrX 103087564 103087710 -63562586 + ID_B1 SINE B4 2 137 -87 1 1371 260 246 37 81 chrX 103087793 103087958 -63562338 + L1M4 LINE L1 4207 4354 -1786 1 1371 969 200 51 0 chrX 103088068 103088263 -63562033 + B3 SINE B2 2 206 -10 1 1371 789 150 34 41 chrX 103088295 103088441 -63561855 + B1_Mur4 SINE Alu 5 149 -1 1 1371 999 163 27 11 chrX 103088449 103088635 -63561661 + B2_Mm2 SINE B2 6 194 -1 1 1371 222 413 21 21 chrX 103088818 103088912 -63561384 + B4A SINE B4 86 179 -113 1 1371 445 286 5 11 chrX 103089396 103089509 -63560787 + B1F SINE Alu 1 115 -5 1 1371 510 284 20 0 chrX 103089498 103089516 -63560780 + ID_B1 SINE B4 71 221 -3 1 1371 657 185 69 0 chrX 103089516 103089646 -63560650 + B1_Mus2 SINE Alu 9 147 0 1 1371 1170 53 70 17 chrX 103089764 103089936 -63560360 + B2_Mm2 SINE B2 1 181 -14 1 1371 275 115 333 55 chrX 103089985 103090093 -63560203 + B2_Mm2 SINE B2 49 186 -9 1 1371 572 201 25 49 chrX 103090134 103090156 -63560140 + ID_B1 SINE B4 67 222 0 1 1371 1020 72 0 0 chrX 103090156 103090294 -63560002 + B1_Mus1 SINE Alu 11 148 0 1 1371 938 147 51 56 chrX 103090559 103090740 -63559556 + B2_Mm2 SINE B2 2 185 -10 1 1371 1154 61 0 0 chrX 103090740 103090887 -63559409 + B1_Mus2 SINE Alu 1 147 0 1 1371 938 147 51 56 chrX 103090887 103090900 -63559396 + B2_Mm2 SINE B2 186 195 0 1 1371 751 288 0 6 chrX 103090919 103091076 -63559220 + RSINE1 SINE B4 8 163 -2 1 1371 656 140 45 23 chrX 103091313 103091445 -63558851 - RMER6B LTR ERVK 0 461 327 1 1371 909 140 158 10 chrX 103091477 103091679 -63558617 - RMER6B LTR ERVK -229 232 1 1 1371 831 159 0 15 chrX 103091757 103091891 -63558405 + B1_Mur3 SINE Alu 11 142 -7 1 1371 436 201 11 3 chrX 103091978 103092073 -63558223 + B1F2 SINE Alu 40 136 -13 2 1371 1094 59 0 0 chrX 103092131 103092267 -63558029 + B1_Mus2 SINE Alu 1 136 -11 2 1371 180 0 0 0 chrX 103092267 103092287 -63558009 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2 1371 932 310 72 24 chrX 103092288 103092662 -63557634 + MLT1E2 LTR MaLR 228 619 -8 2 1371 333 326 121 6 chrX 103092668 103092850 -63557446 + L1MC4 LINE L1 7234 7436 -606 2 1371 213 175 25 0 chrX 103092866 103092906 -63557390 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2 1371 1178 62 0 0 chrX 103093030 103093176 -63557120 + B1_Mm SINE Alu 2 147 0 2 1371 488 244 114 0 chrX 103093217 103093340 -63556956 + B1F2 SINE Alu 13 149 0 2 1371 262 293 0 0 chrX 103093794 103093852 -63556444 + PB1D10 SINE Alu 24 81 -36 2 1371 1199 27 7 26 chrX 103093869 103094020 -63556276 - B1_Mus1 SINE Alu 0 148 1 2 1371 403 338 58 0 chrX 103094154 103094293 -63556003 - B1F SINE Alu -2 147 1 2 1371 1521 42 0 36 chrX 103094342 103094538 -63555758 + B2_Mm1t SINE B2 2 190 -3 2 1371 729 230 13 98 chrX 103094916 103095152 -63555144 + B3 SINE B2 1 216 0 2 1371 870 63 0 0 chrX 103095805 103095916 -63554380 - B1_Mm SINE Alu 0 147 37 2 1371 305 145 0 61 chrX 103095863 103095929 -63554367 - 4.5SRNA scRNA scRNA -8 86 25 2 1371 260 296 0 100 chrX 103096010 103096062 -63554234 + B1_Mur4 SINE Alu 2 48 -102 2 1371 1172 119 0 11 chrX 103096062 103096240 -63554056 + B2_Mm2 SINE B2 1 176 -19 2 1371 1045 44 82 0 chrX 103096618 103096753 -63553543 + B1_Mm SINE Alu 2 147 0 2 1371 561 218 40 16 chrX 103096787 103096913 -63553383 + B1_Mur2 SINE Alu 19 147 -2 2 1371 233 212 45 0 chrX 103096921 103096987 -63553309 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 2 1371 233 348 126 14 chrX 103097067 103097210 -63553086 + B4A SINE B4 4 162 -130 2 1371 836 194 0 0 chrX 103097491 103097635 -63552661 + B1_Mur4 SINE Alu 2 145 -5 2 1371 228 86 0 0 chrX 103097772 103097807 -63552489 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1371 1459 145 32 12 chrX 103097829 103098081 -63552215 + Lx4A LINE L1 6802 7058 0 2 1371 444 198 0 23 chrX 103098089 103098177 -63552119 + MTC LTR MaLR 270 355 -66 2 1371 629 254 71 6 chrX 103098212 103098382 -63551914 + B3 SINE B2 25 205 -11 2 1371 233 163 0 20 chrX 103098395 103098445 -63551851 + G-rich Low_complexity Low_complexity 3 51 0 2 1371 234 226 0 0 chrX 103098446 103098508 -63551788 + L1M2 LINE L1 3143 3204 -2939 2 1371 684 277 18 22 chrX 103098510 103098735 -63551561 + ID_B1 SINE B4 1 224 0 2 1371 476 239 35 35 chrX 103098793 103098906 -63551390 + B3 SINE B2 103 215 -1 2 1371 2730 137 62 73 chrX 103099153 103099204 -63551092 + RMER17D2 LTR ERVK 232 269 -540 2 1371 1010 38 68 8 chrX 103099204 103099336 -63550960 - B1_Mus2 SINE Alu -7 140 1 2 1371 2730 137 62 73 chrX 103099336 103099869 -63550427 + RMER17D2 LTR ERVK 270 809 0 2 1371 686 274 7 0 chrX 103100221 103100367 -63549929 - B1_Mus2 SINE Alu 0 147 1 2 1371 296 194 81 27 chrX 103100496 103100570 -63549726 + RLTR25B LTR ERVK 432 509 -519 2 1371 590 126 42 0 chrX 103100505 103100600 -63549696 + B1_Mur3 SINE Alu 40 138 -11 2 1371 684 273 16 21 chrX 103100926 103101117 -63549179 + B3A SINE B2 4 193 -5 2 1371 306 204 62 88 chrX 103101320 103101433 -63548863 + MT2B LTR ERVL 155 264 -337 2 1371 622 192 40 8 chrX 103101334 103101460 -63548836 + B1_Mus1 SINE Alu 14 143 -5 2 1371 633 315 16 6 chrX 103101699 103101881 -63548415 + B3A SINE B2 10 193 -5 2 1371 1206 54 0 0 chrX 103102034 103102181 -63548115 + B1_Mus2 SINE Alu 1 147 0 2 1371 394 260 65 58 chrX 103102271 103102410 -63547886 + B1F SINE Alu 1 140 -9 2 1371 514 254 20 60 chrX 103102416 103102567 -63547729 + RSINE1 SINE B4 4 148 -17 2 1371 1232 81 28 17 chrX 103102717 103102894 -63547402 - B2_Mm2 SINE B2 -2 193 15 2 1371 475 74 84 24 chrX 103102921 103103088 -63547208 + T-rich Low_complexity Low_complexity 4 180 0 2 1371 1178 68 0 0 chrX 103103108 103103255 -63547041 - B1_Mus2 SINE Alu 0 147 1 2 1371 210 250 45 0 chrX 103103421 103103465 -63546831 + PB1D7 SINE Alu 66 111 -9 2 1371 326 246 205 94 chrX 103103660 103103884 -63546412 + MTEa LTR MaLR 12 260 -119 2 1371 852 70 26 0 chrX 103103983 103104098 -63546198 + B2_Mm2 SINE B2 1 118 -77 2 1371 427 263 75 98 chrX 103104207 103104380 -63545916 - B3 SINE B2 -23 172 4 2 1371 792 165 21 41 chrX 103104498 103104643 -63545653 + B1_Mur4 SINE Alu 2 143 -7 2 1371 423 207 0 12 chrX 103104944 103105027 -63545269 + ID4_ SINE ID 2 83 0 2 1371 640 173 38 152 chrX 103105369 103105553 -63544743 - B2_Mm2 SINE B2 -31 164 2 2 1371 1384 52 6 11 chrX 103105628 103105803 -63544493 + B2_Mm2 SINE B2 3 176 -19 2 1371 411 83 0 0 chrX 103105854 103105914 -63544382 + (CATA)n Simple_repeat Simple_repeat 4 63 0 2 1371 740 264 7 0 chrX 103105930 103106085 -63544211 - B3 SINE B2 -56 160 5 2 1371 361 275 67 0 chrX 103106290 103106410 -63543886 - B3 SINE B2 -19 197 70 2 1371 211 254 43 43 chrX 103106434 103106504 -63543792 - B3A SINE B2 -126 72 3 2 1371 22 0 0 0 chrX 103106509 103106531 -63543765 + AT_rich Low_complexity Low_complexity 1 22 0 2 1371 661 72 52 0 chrX 103106905 103107002 -63543294 + B3 SINE B2 4 105 -111 2 1371 253 316 17 26 chrX 103107116 103107233 -63543063 + L1MCb LINE L1 855 970 -5452 2 1371 342 227 34 11 chrX 103107242 103107331 -63542965 + B3 SINE B2 3 93 -123 2 1371 444 261 8 12 chrX 103107488 103107652 -63542644 + L1MCb LINE L1 1330 1545 -5583 2 1371 503 167 193 0 chrX 103107680 103107794 -63542502 + B1_Mus1 SINE Alu 2 137 -11 2 1371 231 146 196 18 chrX 103107834 103107890 -63542406 + RMER5 LTR ERV1 27 92 -442 2 1371 299 274 123 9 chrX 103107887 103108001 -63542295 + B3A SINE B2 71 197 -1 2 1371 246 355 0 0 chrX 103108130 103108206 -63542090 - ID_B1 SINE B4 -67 157 82 2 1371 845 194 34 40 chrX 103108735 103108945 -63541351 + B3A SINE B2 2 216 0 2 1371 4038 156 83 106 chrX 103108972 103109878 -63540418 + RMER19B LTR ERVK 2 886 -16 2 1371 514 160 64 0 chrX 103109863 103109957 -63540339 + B1_Mus2 SINE Alu 47 146 -1 2 1371 1309 80 34 0 chrX 103110018 103110193 -63540103 + B2_Mm1t SINE B2 1 181 -12 2 1371 342 70 300 58 chrX 103110247 103110367 -63539929 + B2_Mm2 SINE B2 47 195 0 2 1371 543 287 71 49 chrX 103110488 103110755 -63539541 - Lx8 LINE L1 -451 7022 6750 2 1371 282 208 174 20 chrX 103111005 103111103 -63539193 + PB1D10 SINE Alu 3 115 -2 2 1371 717 190 131 11 chrX 103111215 103111391 -63538905 - B3 SINE B2 -19 197 1 2 1371 509 211 105 8 chrX 103111391 103111513 -63538783 - Tigger9b DNA MER2_type -163 461 328 2 1371 277 281 135 38 chrX 103111513 103111646 -63538650 + B1F1 SINE Alu 1 146 -3 2 1371 636 303 65 10 chrX 103111647 103111847 -63538449 - Tigger9b DNA MER2_type -285 339 129 2 1371 327 237 77 143 chrX 103111854 103112036 -63538260 - MER58A DNA MER1_type -7 217 48 2 1371 421 210 110 0 chrX 103112148 103112248 -63538048 - RSINE1 SINE B4 -48 117 7 2 1371 252 0 0 0 chrX 103112732 103112760 -63537536 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 1371 920 126 28 7 chrX 103112926 103113070 -63537226 - B1_Mus1 SINE Alu 0 148 2 2 1371 483 228 17 26 chrX 103113089 103113206 -63537090 - PB1D10 SINE Alu 0 117 2 2 1371 240 35 0 0 chrX 103113228 103113257 -63537039 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1371 1167 75 7 0 chrX 103113423 103113569 -63536727 + B1_Mus2 SINE Alu 1 147 0 2 1371 212 143 0 23 chrX 103113587 103113602 -63536694 + polypurine Low_complexity Low_complexity 2 16 0 2 1371 1243 34 0 0 chrX 103113602 103113749 -63536547 + B1_Mm SINE Alu 1 147 0 2 1371 212 143 0 23 chrX 103113749 103113776 -63536520 + polypurine Low_complexity Low_complexity 17 43 0 2 1371 235 279 0 71 chrX 103113834 103113919 -63536377 - ID4_ SINE ID -3 80 2 2 1371 261 0 0 0 chrX 103113965 103113994 -63536302 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1371 256 253 0 133 chrX 103114114 103114219 -63536077 + MT2B2 LTR ERVL 161 251 -333 2 1371 662 239 0 7 chrX 103114127 103114262 -63536034 + B1_Mur1 SINE Alu 7 140 -9 2 1371 333 250 44 33 chrX 103114270 103114361 -63535935 + B3A SINE B2 2 93 -105 2 1371 873 179 0 7 chrX 103115196 103115342 -63534954 - B1_Mur4 SINE Alu -5 145 1 2 1371 1450 67 0 6 chrX 103115460 103115639 -63534657 + B2_Mm2 SINE B2 2 179 -16 2 1371 1326 29 121 12 chrX 103115639 103115812 -63534484 + B2_Mm1a SINE B2 2 193 0 2 1371 353 216 0 26 chrX 103115837 103115913 -63534383 + ID2 SINE ID 1 74 -9 2 1371 1109 75 0 33 chrX 103115949 103116100 -63534196 + B1_Mm SINE Alu 2 147 0 2 1371 225 119 0 0 chrX 103116169 103116211 -63534085 + (GAAA)n Simple_repeat Simple_repeat 1 42 0 2 1371 376 194 0 0 chrX 103116222 103116289 -63534007 + ID4 SINE ID 8 74 -9 2 1371 372 192 64 0 chrX 103116289 103116300 -63533996 + ID_B1 SINE B4 8 90 -134 2 1371 606 206 63 0 chrX 103116590 103116716 -63533580 + B1_Mus2 SINE Alu 14 147 0 2 1371 685 90 0 10 chrX 103116835 103116936 -63533360 + B2_Mm2 SINE B2 67 166 -29 2 1371 912 109 34 7 chrX 103116932 103117079 -63533217 - B2_Mm2 SINE B2 -43 152 2 2 1371 1098 0 0 0 chrX 103117086 103117208 -63533088 + (GGAAA)n Simple_repeat Simple_repeat 5 126 0 3 1371 194 0 39 0 chrX 103117332 103117358 -63532938 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1371 2465 53 87 16 chrX 103117662 103117985 -63532311 + ORR1A1 LTR MaLR 1 346 0 3 1371 575 149 11 0 chrX 103118098 103118192 -63532104 - B1_Mus2 SINE Alu -11 136 42 3 1371 4156 62 62 2 chrX 103118279 103118811 -63531485 + LTRIS2 LTR ERV1 1 564 0 3 1371 1020 139 193 6 chrX 103118977 103119158 -63531138 + B3 SINE B2 2 216 0 3 1371 447 134 69 49 chrX 103119191 103119293 -63531003 + B1_Mur3 SINE Alu 41 144 -5 3 1371 698 173 11 42 chrX 103119294 103119559 -63530737 + G-rich Low_complexity Low_complexity 1 256 0 3 1371 231 215 0 0 chrX 103119557 103119622 -63530674 + (CAGAG)n Simple_repeat Simple_repeat 3 67 0 3 1371 436 244 167 8 chrX 103119658 103119790 -63530506 + B3A SINE B2 10 162 -36 3 1371 458 263 8 17 chrX 103119818 103119938 -63530358 + PB1D7 SINE Alu 1 119 -1 3 1371 408 184 291 9 chrX 103120041 103120151 -63530145 + B3A SINE B2 1 141 -57 3 1371 1265 183 191 39 chrX 103120152 103120482 -63529814 + ORR1C2 LTR MaLR 5 384 0 3 1371 302 210 61 216 chrX 103120494 103120538 -63529758 + B2_Mm2 SINE B2 1 36 -159 3 1371 1620 31 0 20 chrX 103120538 103120734 -63529562 + B2_Mm1a SINE B2 2 193 0 3 1371 520 184 45 101 chrX 103120734 103120920 -63529376 + B3 SINE B2 27 195 0 3 1371 2259 237 193 35 chrX 103120922 103121810 -63528486 + ORR1C2-int LTR MaLR 1 1028 -342 3 1371 599 175 31 8 chrX 103121821 103121948 -63528348 + ORR1C2 LTR MaLR 255 384 0 3 1371 356 275 0 84 chrX 103122030 103122149 -63528147 + RSINE1 SINE B4 3 111 -54 3 1371 228 67 0 0 chrX 103122163 103122193 -63528103 + (TC)n Simple_repeat Simple_repeat 1 30 0 3 1371 345 298 61 9 chrX 103122314 103122429 -63527867 + ID_B1 SINE B4 7 127 -97 3 1371 1210 22 0 0 chrX 103122922 103123060 -63527236 + B1_Mus2 SINE Alu 1 138 -9 3 1371 225 0 0 0 chrX 103123060 103123085 -63527211 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 1371 308 132 24 24 chrX 103123920 103124005 -63526291 + C-rich Low_complexity Low_complexity 3 87 0 3 1371 351 113 0 0 chrX 103124186 103124248 -63526048 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 1371 273 57 0 0 chrX 103124600 103124635 -63525661 + (CTG)n Simple_repeat Simple_repeat 3 37 0 3 1371 336 242 16 0 chrX 103125160 103125222 -63525074 - ID4_ SINE ID -20 63 1 3 1371 22 99 0 0 chrX 103125266 103125337 -63524959 + AT_rich Low_complexity Low_complexity 1 71 0 3 1371 376 294 47 8 chrX 103125388 103125515 -63524781 - B1F1 SINE Alu -11 138 7 3 1371 243 0 0 0 chrX 103125931 103125958 -63524338 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1371 820 191 0 0 chrX 103125959 103126095 -63524201 - B1_Mus2 SINE Alu -11 136 1 3 1371 453 215 189 18 chrX 103126127 103126294 -63524002 - B3A SINE B2 -17 199 1 3 1371 467 176 12 0 chrX 103126319 103126404 -63523892 - RMER1C Other Other -11 1331 1246 3 1371 642 146 0 0 chrX 103126417 103126527 -63523769 + (GGA)n Simple_repeat Simple_repeat 1 110 0 3 1371 879 152 88 42 chrX 103126527 103126719 -63523577 - RMER1C Other Other -121 1221 1021 3 1371 381 164 0 0 chrX 103127017 103127078 -63523218 - ID_B1 SINE B4 -2 222 162 3 1371 1295 215 77 51 chrX 103127083 103127436 -63522860 + MTE2a LTR MaLR 9 370 -9 3 1371 1649 124 4 15 chrX 103127561 103127821 -63522475 + ORR1B1 LTR MaLR 5 261 -133 3 1371 441 309 101 24 chrX 103127821 103127990 -63522306 + B3A SINE B2 4 185 -13 3 1371 471 261 0 0 chrX 103127991 103128102 -63522194 + PB1D9 SINE Alu 1 111 -9 3 1371 259 129 28 28 chrX 103128106 103128178 -63522118 + (TCTCTG)n Simple_repeat Simple_repeat 6 77 0 3 1371 549 291 156 20 chrX 103128695 103128998 -63521298 - L1M4 LINE L1 -3534 2612 2269 3 1371 180 0 0 0 chrX 103129197 103129217 -63521079 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 3 1371 284 197 167 0 chrX 103129317 103129383 -63520913 + ID_B1 SINE B4 139 215 -9 3 1371 288 265 38 38 chrX 103129430 103129536 -63520760 - L1M4 LINE L1 -3277 2869 2764 3 1371 189 74 0 0 chrX 103129536 103129563 -63520733 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3 1371 526 291 92 36 chrX 103129598 103129848 -63520448 - RMER15 LTR ERVL -12 563 300 3 1371 24 0 0 0 chrX 103130097 103130121 -63520175 + AT_rich Low_complexity Low_complexity 1 24 0 3 1371 1107 58 15 0 chrX 103130302 103130439 -63519857 + B1_Mm SINE Alu 1 139 -8 3 1371 215 31 31 0 chrX 103130440 103130472 -63519824 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 3 1371 2011 171 50 227 chrX 103130472 103130837 -63519459 + L1_Mur3 LINE L1 2481 2859 -3021 3 1371 737 132 77 54 chrX 103130837 103130918 -63519378 - RLTR23 LTR ERV1 -102 328 253 3 1371 4424 75 3 35 chrX 103130918 103131524 -63518772 - LTRIS_Mus LTR ERV1 0 587 1 3 1371 737 132 77 54 chrX 103131524 103131610 -63518686 - RLTR23 LTR ERV1 -178 252 157 3 1371 2011 171 50 227 chrX 103131610 103131849 -63518447 + L1_Mur3 LINE L1 2860 3116 -2764 3 1371 2882 81 4 33 chrX 103131891 103132242 -63518054 - LTRIS5 LTR ERV1 -10 437 99 3 1371 1238 48 0 0 chrX 103132242 103132389 -63517907 - B1_Mus1 SINE Alu -1 147 1 3 1371 2882 81 4 33 chrX 103132389 103132487 -63517809 - LTRIS5 LTR ERV1 -349 98 1 3 1371 3101 137 125 7 chrX 103132487 103133105 -63517191 + L1_Mur3 LINE L1 3994 4684 -1196 3 1371 2282 107 118 61 chrX 103133105 103133512 -63516784 + RLTR23 LTR ERV1 1 430 0 3 1371 3105 54 10 13 chrX 103133521 103133918 -63516378 + MTA_Mm LTR MaLR 1 396 0 3 1371 1629 45 0 0 chrX 103134308 103134506 -63515790 - L1Md_T LINE L1 0 6582 6385 3 1371 601 280 76 71 chrX 103135140 103135275 -63515021 + MuRRS4-int LTR ERV1 1073 1228 -3835 3 1371 531 31 0 0 chrX 103135275 103135340 -63514956 + (GA)n Simple_repeat Simple_repeat 1 65 0 3 1371 601 297 84 70 chrX 103135340 103135720 -63514576 + MuRRS4-int LTR ERV1 1229 1841 -5937 3 1371 489 221 19 19 chrX 103135768 103135874 -63514422 + RLTR4_MM-int LTR ERV1 2987 3092 -4464 3 1371 956 314 60 57 chrX 103136089 103136874 -63513422 + RLTR4_MM-int LTR ERV1 3398 4184 -3372 3 1371 1239 84 20 40 chrX 103137079 103137213 -63513083 + ORR1A2 LTR MaLR 133 269 -58 3 1371 1156 51 0 0 chrX 103137213 103137351 -63512945 + B1_Mus1 SINE Alu 1 138 -10 3 1371 229 26 26 26 chrX 103137351 103137390 -63512906 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1371 1239 84 20 40 chrX 103137390 103137453 -63512843 + ORR1A2 LTR MaLR 270 326 -1 3 1371 974 268 14 10 chrX 103137814 103138108 -63512188 + RLTR4_MM-int LTR ERV1 4799 5093 -2508 3 1371 707 86 17 8 chrX 103138109 103138226 -63512070 + PB1D9 SINE Alu 2 119 -1 3 1371 770 136 8 0 chrX 103138233 103138365 -63511931 + (GGGAA)n Simple_repeat Simple_repeat 3 135 0 3 1371 198 150 0 0 chrX 103138362 103138402 -63511894 + (GAAA)n Simple_repeat Simple_repeat 1 40 0 3 1371 587 263 33 0 chrX 103138402 103138554 -63511742 + RLTR4_MM-int LTR ERV1 5023 5179 -2377 3 1371 994 216 78 54 chrX 103138595 103138864 -63511432 + L1_Mur3 LINE L1 4978 5251 -629 3 1371 180 0 0 0 chrX 103138864 103138884 -63511412 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 1371 994 216 78 54 chrX 103138884 103138908 -63511388 + L1_Mur3 LINE L1 5252 5277 -603 3 1371 1004 72 0 73 chrX 103138908 103139058 -63511238 + B1_Mus2 SINE Alu 1 139 -8 3 1371 532 250 44 0 chrX 103139099 103139235 -63511061 + B1_Mur4 SINE Alu 1 142 -8 3 1371 425 111 0 27 chrX 103139260 103139334 -63510962 + (GGAA)n Simple_repeat Simple_repeat 3 74 0 3 1371 317 125 144 22 chrX 103139334 103139424 -63510872 + L1_Mur3 LINE L1 5262 5362 -518 3 1371 234 231 0 0 chrX 103139422 103139474 -63510822 - L1_Mur3 LINE L1 -3362 2518 2467 3 1371 2428 177 84 15 chrX 103139474 103139950 -63510346 + RLTR18B LTR ERVK 1 509 -3 3 1371 622 222 0 0 chrX 103139968 103140085 -63510211 + B1F2 SINE Alu 1 117 -32 3 1371 337 218 50 56 chrX 103140094 103140274 -63510022 - RMER17C LTR ERVK -135 275 97 3 1371 1325 205 56 45 chrX 103140292 103140380 -63509916 - L1_Mur3 LINE L1 -3410 2470 2379 3 1371 1160 76 0 0 chrX 103140380 103140525 -63509771 + B1_Mm SINE Alu 1 145 -2 3 1371 206 32 0 31 chrX 103140525 103140557 -63509739 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 3 1371 1325 205 56 45 chrX 103140557 103140804 -63509492 - L1_Mur3 LINE L1 -3502 2378 2131 3 1371 1178 73 6 0 chrX 103140814 103140979 -63509317 - B2_Mm1a SINE B2 -26 167 2 3 1371 1584 119 0 0 chrX 103141006 103141241 -63509055 - ORR1A2 LTR MaLR 0 327 93 3 1371 1068 187 30 0 chrX 103141525 103141728 -63508568 - RLTR18B LTR ERVK -62 450 242 3 1371 628 133 17 26 chrX 103141820 103141936 -63508360 - ORR1B1 LTR MaLR -239 155 41 3 1371 778 167 49 12 chrX 103141950 103142114 -63508182 - L1_Mur3 LINE L1 -3786 2094 1925 3 1371 263 233 0 40 chrX 103142114 103142190 -63508106 + RLTR25A LTR ERVK 500 572 -531 3 1371 749 83 9 0 chrX 103142129 103142238 -63508058 + B1_Mus1 SINE Alu 39 148 0 3 1371 192 40 0 0 chrX 103142238 103142263 -63508033 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 3 1371 407 276 103 0 chrX 103142272 103142388 -63507908 + B1_Mur4 SINE Alu 2 129 -21 3 1371 2485 141 41 2 chrX 103142390 103142858 -63507438 - L1_Mur3 LINE L1 -3988 1892 1407 3 1371 878 143 0 7 chrX 103142858 103142999 -63507297 - B1_Mus1 SINE Alu 0 148 9 3 1371 321 264 0 94 chrX 103142904 103143021 -63507275 - MT2B LTR ERVL -344 257 152 3 1371 305 211 14 0 chrX 103143021 103143092 -63507204 - L1_Mur3 LINE L1 -4488 1392 1321 3 1371 252 196 0 18 chrX 103143081 103143138 -63507158 - L1M4 LINE L1 -4688 1958 1903 3 1371 422 229 0 12 chrX 103143170 103143254 -63507042 - ID4_ SINE ID 0 83 1 3 1371 230 214 42 28 chrX 103143255 103143327 -63506969 - L1M4 LINE L1 -4728 1918 1846 3 1371 266 346 12 0 chrX 103143400 103143481 -63506815 - ID_B1 SINE B4 -59 165 84 3 1371 399 249 38 0 chrX 103143490 103143621 -63506675 - L1M4 LINE L1 -5056 1684 1458 3 1371 255 297 0 26 chrX 103143626 103143702 -63506594 - ID4 SINE ID -4 79 6 3 1371 1271 66 16 16 chrX 103144052 103144237 -63506059 - B2_Mm2 SINE B2 -9 186 2 3 1371 288 0 0 0 chrX 103144244 103144276 -63506020 + (TTA)n Simple_repeat Simple_repeat 2 33 0 3 1371 1156 62 0 7 chrX 103144276 103144421 -63505875 - B1_Mm SINE Alu -2 145 2 3 1371 978 281 32 86 chrX 103144492 103144924 -63505372 + RLTR23 LTR ERV1 10 418 -12 3 1371 1032 87 14 14 chrX 103144931 103145071 -63505225 + B1_Mus2 SINE Alu 1 140 -7 3 1371 416 200 100 0 chrX 103145113 103145203 -63505093 + PB1D10 SINE Alu 12 110 -7 3 1371 537 239 49 14 chrX 103145223 103145367 -63504929 + B1_Mur1 SINE Alu 1 149 0 3 1371 801 43 256 0 chrX 103145378 103145495 -63504801 + B1_Mus1 SINE Alu 1 147 -1 3 1371 450 295 31 19 chrX 103145516 103145675 -63504621 + RSINE1 SINE B4 5 165 0 3 1371 255 179 3 0 chrX 103145829 103145891 -63504405 - PB1D10 SINE Alu -1 148 65 3 1371 929 40 0 16 chrX 103145934 103146060 -63504236 - B1_Mm SINE Alu 0 147 24 3 1371 1381 52 39 22 chrX 103146080 103146258 -63504038 - B2_Mm2 SINE B2 -14 181 1 4 1371 2401 190 112 15 chrX 103146259 103146854 -63503442 - RMER19A LTR ERVK -19 718 1 4 1371 1604 37 11 0 chrX 103147042 103147232 -63503064 - B2_Mm1t SINE B2 0 193 2 4 1371 386 297 0 0 chrX 103147404 103147515 -63502781 - L1MA4 LINE L1 -375 5925 5815 4 1371 407 206 81 20 chrX 103147560 103147659 -63502637 + B4A SINE B4 6 110 -182 4 1371 919 267 52 45 chrX 103147785 103148075 -63502221 - B4A SINE B4 0 292 1 4 1371 341 292 31 19 chrX 103148091 103148221 -63502075 - B1F SINE Alu -1 148 10 4 1371 500 162 12 0 chrX 103148253 103148333 -63501963 - B1F2 SINE Alu -15 134 54 4 1371 309 279 47 0 chrX 103148653 103148739 -63501557 + ID_B1 SINE B4 95 184 -40 4 1371 390 291 91 14 chrX 103148766 103148909 -63501387 + B4A SINE B4 78 231 -61 4 1371 797 124 39 0 chrX 103148902 103149031 -63501265 + B1_Mus2 SINE Alu 6 139 -8 4 1371 230 218 0 18 chrX 103149061 103149117 -63501179 + B4A SINE B4 216 270 -22 4 1371 1900 177 7 108 chrX 103149202 103149879 -63500417 - RMER15 LTR ERVL -2 573 25 4 1371 2903 68 36 10 chrX 103150224 103150610 -63499686 - MTA_Mm LTR MaLR 0 396 1 4 1371 898 99 11 7 chrX 103150702 103150850 -63499446 + B2_Mm1t SINE B2 1 152 -43 4 1371 435 108 407 37 chrX 103150850 103150985 -63499311 + B2_Mm2 SINE B2 3 187 -8 4 1371 891 146 54 5 chrX 103150985 103151022 -63499274 + B2_Mm2 SINE B2 153 194 -1 4 1371 486 252 8 48 chrX 103151134 103151259 -63499037 + PB1D9 SINE Alu 1 120 0 4 1371 389 355 89 11 chrX 103151815 103152097 -63498199 - L1M3e LINE L1 -6686 344 41 4 1371 699 203 0 0 chrX 103152202 103152325 -63497971 + B3 SINE B2 2 124 -92 4 1371 242 321 36 0 chrX 103152389 103152473 -63497823 - B3A SINE B2 -17 181 95 4 1371 541 202 0 9 chrX 103152450 103152560 -63497736 + B1_Mus1 SINE Alu 38 146 -2 4 1371 194 91 0 29 chrX 103152561 103152589 -63497707 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 1371 1525 148 111 4 chrX 103152589 103152868 -63497428 + RLTR27 LTR ERVK 1 309 0 4 1371 272 300 0 41 chrX 103152949 103153022 -63497274 - ID4_ SINE ID -10 73 4 4 1371 1294 86 40 0 chrX 103153097 103153271 -63497025 - B2_Mm2 SINE B2 -14 181 1 4 1371 481 199 242 6 chrX 103153276 103153437 -63496859 - B3 SINE B2 -4 212 14 4 1371 318 254 0 0 chrX 103153471 103153534 -63496762 - ID_B1 SINE B4 -17 207 145 4 171 1247 14 0 0 chrX 103153556 103153695 -63496601 - B1_Mm SINE Alu -8 139 1 4 1372 343 91 0 35 chrX 103153746 103153803 -63496493 - B2_Mm2 SINE B2 -94 101 47 4 1372 840 114 8 0 chrX 103153819 103153951 -63496345 - B2_Mm2 SINE B2 -61 134 2 4 1372 322 243 14 14 chrX 103153952 103154023 -63496273 - ID_B1 SINE B4 -69 155 85 4 1372 216 0 0 0 chrX 103154062 103154086 -63496210 + (TTA)n Simple_repeat Simple_repeat 2 25 0 4 1372 316 212 5 152 chrX 103154087 103154304 -63495992 - RMER17C LTR ERVK -135 275 91 4 1372 310 127 0 16 chrX 103154506 103154568 -63495728 + B1_Mus1 SINE Alu 1 58 -91 4 1372 1211 54 0 0 chrX 103154879 103155026 -63495270 - B1_Mus1 SINE Alu 0 148 2 4 1372 1358 80 10 31 chrX 103155028 103155222 -63495074 - B2_Mm1t SINE B2 -2 191 2 4 1372 417 171 94 1 chrX 103155290 103155381 -63494915 - B1_Mur2 SINE Alu 0 149 26 4 1372 7560 113 28 9 chrX 103155414 103156578 -63493718 - Lx4A LINE L1 0 7058 5873 4 1372 385 287 39 10 chrX 103156641 103156743 -63493553 + ID_B1 SINE B4 90 194 -30 4 1372 1654 31 5 0 chrX 103156850 103157041 -63493255 + B2_Mm1t SINE B2 2 193 0 4 1372 266 329 26 20 chrX 103157054 103157169 -63493127 + PB1D10 SINE Alu 1 125 -2 4 1372 367 261 11 22 chrX 103157184 103157274 -63493022 + ID SINE ID 1 89 -135 4 1372 198 0 0 0 chrX 103157280 103157302 -63492994 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 4 1372 1160 70 0 0 chrX 103157307 103157463 -63492833 - B2_Mm2 SINE B2 -38 157 2 4 1372 215 224 20 0 chrX 103157467 103157516 -63492780 + ID_B1 SINE B4 97 146 -78 4 1372 1202 61 0 0 chrX 103157550 103157698 -63492598 + B1_Mus1 SINE Alu 1 148 0 4 1372 208 123 34 34 chrX 103157710 103157769 -63492527 + A-rich Low_complexity Low_complexity 3 61 0 4 1372 545 205 0 62 chrX 103157850 103157980 -63492316 + B3A SINE B2 1 122 -76 4 1372 757 294 30 0 chrX 103158068 103158265 -63492031 - B3 SINE B2 -13 203 1 4 1372 189 0 0 0 chrX 103158296 103158317 -63491979 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 4 1372 408 276 73 57 chrX 103158317 103158430 -63491866 - B1F1 SINE Alu -11 116 1 4 1372 397 287 0 0 chrX 103158563 103158664 -63491632 - PB1D10 SINE Alu -16 101 1 4 1372 1144 75 0 13 chrX 103158740 103158889 -63491407 - B1_Mm SINE Alu 0 147 1 4 1372 468 227 202 0 chrX 103158894 103159013 -63491283 - B1_Mur2 SINE Alu -3 146 4 4 1372 387 312 16 8 chrX 103159019 103159145 -63491151 - ID_B1 SINE B4 -1 223 97 4 1372 347 75 0 0 chrX 103159172 103159225 -63491071 + PB1D10 SINE Alu 1 53 -64 4 1372 344 316 43 9 chrX 103159258 103159373 -63490923 - PB1 SINE Alu -8 119 1 4 1372 559 267 37 6 chrX 103159388 103159578 -63490718 - L1M4 LINE L1 -384 5794 5598 4 1372 288 283 0 0 chrX 103159828 103159888 -63490408 - B1F1 SINE Alu -89 60 1 4 1372 562 220 132 37 chrX 103159909 103160098 -63490198 - B3 SINE B2 -9 207 1 4 1372 305 315 71 71 chrX 103160126 103160180 -63490116 - L1M4 LINE L1 -610 5574 5528 4 1372 1577 59 0 0 chrX 103160180 103160384 -63489912 - L1Md_A LINE L1 0 6582 6379 4 1372 305 318 68 53 chrX 103160384 103160483 -63489813 - L1M4 LINE L1 -644 5527 5421 4 1372 1255 27 0 0 chrX 103160576 103160722 -63489574 - B1_Mm SINE Alu 0 147 2 4 1372 236 214 0 51 chrX 103160725 103160784 -63489512 - PB1D10 SINE Alu -41 76 21 4 1372 429 246 137 8 chrX 103160811 103160942 -63489354 - B1_Mur1 SINE Alu -1 148 1 4 1372 379 242 71 64 chrX 103161012 103161153 -63489143 - ID_B1 SINE B4 -2 222 81 4 1372 22 0 0 0 chrX 103161880 103161902 -63488394 + AT_rich Low_complexity Low_complexity 1 22 0 4 1372 718 167 28 28 chrX 103161918 103162060 -63488236 - B1_Mur3 SINE Alu -5 144 3 4 1372 1281 191 0 18 chrX 103162138 103162362 -63487934 - URR1B DNA MER1_type -1 224 5 4 1372 490 245 28 14 chrX 103162364 103162509 -63487787 - B1_Mur1 SINE Alu -1 148 2 4 1372 1096 132 0 0 chrX 103162649 103162815 -63487481 + B2_Mm2 SINE B2 1 166 -29 4 1372 1300 20 0 0 chrX 103162861 103163008 -63487288 + B1_Mm SINE Alu 1 147 0 4 1372 397 75 0 0 chrX 103163018 103163085 -63487211 + B2_Mm1a SINE B2 127 193 0 4 1372 550 261 320 0 chrX 103163126 103163398 -63486898 + ORR1E LTR MaLR 1 359 0 4 1372 662 226 87 43 chrX 103164061 103164269 -63486027 - ID_B1 SINE B4 -2 222 6 4 1372 260 243 157 0 chrX 103164329 103164399 -63485897 - ID4 SINE ID -2 81 1 4 1372 774 32 0 0 chrX 103164404 103164497 -63485799 + (TTTC)n Simple_repeat Simple_repeat 3 95 0 4 1372 696 47 274 0 chrX 103164497 103164603 -63485693 - B1_Mus1 SINE Alu -12 136 2 4 1372 189 0 0 0 chrX 103164640 103164661 -63485635 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 4 1372 1156 89 0 0 chrX 103164668 103164826 -63485470 - B2_Mm2 SINE B2 -36 159 2 4 1372 1414 70 16 0 chrX 103164837 103165022 -63485274 - B2_Mm1t SINE B2 -5 188 1 4 1372 345 212 0 58 chrX 103165367 103165487 -63484809 + B1F1 SINE Alu 10 113 -7 4 1372 282 234 0 0 chrX 103165705 103165769 -63484527 - ID4_ SINE ID -16 67 4 4 1372 364 156 0 72 chrX 103165803 103165886 -63484410 - PB1D9 SINE Alu 0 120 44 4 1372 1269 28 21 0 chrX 103167020 103167164 -63483132 - B1_Mm SINE Alu 0 147 1 4 1372 954 162 7 33 chrX 103167174 103167327 -63482969 - B1_Mur3 SINE Alu 0 149 1 4 1372 328 242 56 155 chrX 103167436 103167578 -63482718 - ID_B1 SINE B4 -6 218 91 4 1372 1084 204 19 9 chrX 103167613 103167826 -63482470 + B3 SINE B2 1 215 -1 4 1372 454 212 36 127 chrX 103168015 103168189 -63482107 - B3A SINE B2 -1 215 41 4 1372 1619 62 5 0 chrX 103168194 103168386 -63481910 - B2_Mm1t SINE B2 0 193 1 4 1372 381 262 123 61 chrX 103168445 103168551 -63481745 + B3 SINE B2 39 152 -64 4 1372 384 77 0 0 chrX 103168551 103168603 -63481693 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1372 680 188 85 8 chrX 103168663 103168674 -63481622 + B1_Mm SINE Alu 2 12 -135 4 1372 1204 44 7 0 chrX 103168674 103168811 -63481485 - B1_Mus2 SINE Alu -9 138 1 4 1372 680 188 85 8 chrX 103168811 103168928 -63481368 + B1_Mm SINE Alu 13 139 -8 4 1372 493 235 10 0 chrX 103168994 103169096 -63481200 + PB1D9 SINE Alu 9 111 -9 4 1372 265 297 188 0 chrX 103169096 103169124 -63481172 + B4A SINE B4 118 249 -43 4 1372 570 252 44 15 chrX 103169125 103169262 -63481034 + B1F SINE Alu 1 141 -8 4 1372 330 247 224 0 chrX 103169319 103169404 -63480892 + PB1D10 SINE Alu 24 127 0 4 1372 865 171 0 41 chrX 103169881 103170027 -63480269 - B1_Mur4 SINE Alu -10 140 1 4 1372 1302 122 0 27 chrX 103170044 103170229 -63480067 - B2_Mm2 SINE B2 -14 181 2 4 1372 536 257 0 29 chrX 103170360 103170496 -63479800 + B1F2 SINE Alu 16 140 -9 4 1372 398 318 63 0 chrX 103170549 103170675 -63479621 + B1F SINE Alu 16 149 0 4 1372 498 289 51 51 chrX 103170687 103170884 -63479412 + B3 SINE B2 1 197 -19 4 1372 387 181 23 57 chrX 103171021 103171109 -63479187 + B1_Mur1 SINE Alu 65 149 0 4 1372 672 243 36 22 chrX 103171254 103171393 -63478903 + RSINE1 SINE B4 3 143 -22 5 1372 342 0 0 0 chrX 103171396 103171434 -63478862 + (CATA)n Simple_repeat Simple_repeat 4 41 0 5 1372 1883 146 95 54 chrX 103171438 103171808 -63478488 + ORR1B1 LTR MaLR 2 386 -8 5 1372 240 115 48 32 chrX 103171811 103171874 -63478422 + (CATA)n Simple_repeat Simple_repeat 4 67 0 5 1372 21 36 0 0 chrX 103171875 103171903 -63478393 + AT_rich Low_complexity Low_complexity 1 28 0 5 1372 295 282 80 26 chrX 103171976 103172089 -63478207 - PB1D9 SINE Alu 0 120 2 5 1372 580 285 16 25 chrX 103172250 103172400 -63477896 - ID_B1 SINE B4 -1 223 81 5 1372 329 260 45 63 chrX 103172400 103172511 -63477785 - PB1D10 SINE Alu -7 110 2 5 1372 252 324 56 112 chrX 103172511 103172525 -63477771 - B4A SINE B4 -210 82 71 5 1372 805 244 112 29 chrX 103172741 103172982 -63477314 + RLTR11A2 LTR ERVK 19 279 -248 5 1372 259 322 11 11 chrX 103172975 103173063 -63477233 + BGLII_B LTR ERVK 321 408 -33 5 1372 963 117 0 0 chrX 103173146 103173283 -63477013 - B1_Mus2 SINE Alu -5 142 6 5 1372 299 329 0 0 chrX 103173385 103173464 -63476832 - ID4 SINE ID -3 80 2 5 1372 493 218 47 47 chrX 103173473 103173622 -63476674 - B1F1 SINE Alu 0 149 1 5 1372 880 286 18 0 chrX 103173657 103173877 -63476419 + ID_B1 SINE B4 1 224 0 5 1372 1132 105 12 0 chrX 103173971 103174133 -63476163 + B2_Mm1t SINE B2 3 166 -27 5 1372 264 168 310 26 chrX 103174186 103174302 -63475994 + B2_Mm2 SINE B2 47 195 0 5 1372 441 0 0 0 chrX 103174363 103174412 -63475884 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 5 1372 297 0 0 0 chrX 103174454 103174487 -63475809 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 5 1372 2831 59 39 6 chrX 103174986 103175344 -63474952 + L1Md_F2 LINE L1 6201 6570 -12 5 1372 809 220 35 0 chrX 103175417 103175558 -63474738 + B1_Mur1 SINE Alu 3 148 -1 5 1372 1106 58 80 0 chrX 103176206 103176343 -63473953 - B1_Mus1 SINE Alu 0 148 1 5 1372 562 229 118 0 chrX 103176401 103176545 -63473751 - MTE2b LTR MaLR -25 354 194 5 1372 2034 159 60 19 chrX 103176549 103176945 -63473351 + MTC LTR MaLR 1 370 0 5 1372 3236 20 0 3 chrX 103176982 103177328 -63472968 + ORR1A0 LTR MaLR 2 346 0 5 1372 336 294 148 43 chrX 103177330 103177463 -63472833 + LTR16B1 LTR ERVL 209 369 -111 5 1372 1735 217 33 150 chrX 103177463 103178038 -63472258 + RLTR18B LTR ERVK 1 508 -4 5 1372 336 294 148 43 chrX 103178038 103178114 -63472182 + LTR16B1 LTR ERVL 370 440 -40 5 1372 535 253 0 161 chrX 103178197 103178371 -63471925 - RSINE1 SINE B4 0 165 20 5 1372 261 0 0 0 chrX 103178384 103178413 -63471883 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1372 273 319 14 0 chrX 103178503 103178575 -63471721 - ID4 SINE ID -10 73 1 5 1372 201 39 0 0 chrX 103178613 103178639 -63471657 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 5 1372 485 150 390 0 chrX 103178652 103178752 -63471544 - B1_Mur4 SINE Alu -11 139 1 5 1372 237 306 102 20 chrX 103178755 103178902 -63471394 + LTR65 LTR ERV1 477 635 -34 5 1372 864 51 246 0 chrX 103180046 103180164 -63470132 - B1_Mm SINE Alu 0 147 1 5 1372 573 303 22 27 chrX 103180198 103180381 -63469915 + B3A SINE B2 17 198 0 5 1372 235 315 19 148 chrX 103180495 103180603 -63469693 + RSINE1 SINE B4 7 100 -65 5 1372 774 146 16 0 chrX 103180615 103180738 -63469558 + ORR1B2 LTR MaLR 242 366 -1 5 1372 675 211 79 35 chrX 103180738 103180996 -63469300 + ORR1D1 LTR MaLR 27 372 -2 5 1372 237 222 0 43 chrX 103181002 103181049 -63469247 + B4 SINE B4 52 96 -196 5 1372 619 259 94 11 chrX 103181051 103181231 -63469065 + B3A SINE B2 4 198 0 5 1372 282 242 85 77 chrX 103181172 103181302 -63468994 + B4 SINE B4 158 288 -4 5 1372 686 355 57 18 chrX 103181345 103181542 -63468754 + B4A SINE B4 1 212 -80 5 1372 815 138 37 30 chrX 103181542 103181676 -63468620 + B1_Mm SINE Alu 1 135 -12 5 1372 686 355 57 18 chrX 103181676 103181759 -63468537 + B4A SINE B4 213 291 -1 5 1372 413 301 31 47 chrX 103181849 103181978 -63468318 + B4A SINE B4 88 214 -78 5 1372 713 163 7 0 chrX 103181997 103182132 -63468164 + GA-rich Low_complexity Low_complexity 1 136 0 5 1372 4240 197 55 43 chrX 103182149 103183855 -63466441 + Lx5 LINE L1 5376 7402 -58 5 1372 29 19 0 55 chrX 103183861 103183887 -63466409 + AT_rich Low_complexity Low_complexity 1 26 0 5 1372 888 154 26 83 chrX 103183887 103183971 -63466325 + B1_Mur4 SINE Alu 4 76 -74 5 1372 1260 119 22 0 chrX 103183971 103184156 -63466140 + B2_Mm2 SINE B2 1 189 -6 5 1372 888 154 26 83 chrX 103184156 103184227 -63466069 + B1_Mur4 SINE Alu 77 150 0 5 1372 29 19 0 55 chrX 103184227 103184255 -63466041 + AT_rich Low_complexity Low_complexity 1 26 0 5 1372 1205 63 0 0 chrX 103185037 103185179 -63465117 - B1_Mus2 SINE Alu -5 142 1 5 1372 485 280 19 0 chrX 103185786 103185893 -63464403 - PB1D9 SINE Alu -6 114 6 5 1372 252 328 18 40 chrX 103186102 103186226 -63464070 + PB1 SINE Alu 23 147 -2 5 1372 1222 75 0 13 chrX 103186226 103186365 -63463931 + B1_Mus1 SINE Alu 1 139 -9 5 1372 215 31 31 0 chrX 103186365 103186397 -63463899 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 5 1372 658 168 0 18 chrX 103186413 103186522 -63463774 + B1_Mus2 SINE Alu 4 110 -37 5 1372 251 290 0 31 chrX 103186948 103187012 -63463284 + ID_B1 SINE B4 76 137 -87 5 1372 265 330 46 28 chrX 103186961 103187070 -63463226 + PB1D10 SINE Alu 6 116 -1 5 1372 1310 115 16 0 chrX 103187165 103187347 -63462949 + B2_Mm2 SINE B2 1 185 -10 5 1372 1170 215 5 5 chrX 103187432 103187638 -63462658 - B3 SINE B2 -7 209 4 5 1372 295 191 112 0 chrX 103188095 103188184 -63462112 - B1_Mur4 SINE Alu -5 145 47 5 1372 672 229 75 48 chrX 103188259 103188447 -63461849 - B3A SINE B2 -3 195 3 5 1372 420 302 26 8 chrX 103188450 103188567 -63461729 - PB1 SINE Alu -6 121 3 5 1372 217 348 29 0 chrX 103188585 103188654 -63461642 - ID4_ SINE ID -5 78 8 5 1372 554 217 30 15 chrX 103188742 103188873 -63461423 + B1F1 SINE Alu 10 142 -7 5 1372 966 277 62 18 chrX 103188896 103189172 -63461124 + B4 SINE B4 1 288 -4 5 1372 351 0 0 0 chrX 103189191 103189230 -63461066 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1372 21 0 0 0 chrX 103189533 103189554 -63460742 + AT_rich Low_complexity Low_complexity 1 21 0 5 1372 205 92 59 44 chrX 103189662 103189698 -63460598 + T-rich Low_complexity Low_complexity 31 70 0 5 1372 1275 48 7 0 chrX 103189698 103189843 -63460453 - B1_Mus2 SINE Alu 0 147 2 5 1372 205 92 59 44 chrX 103189843 103189874 -63460422 + T-rich Low_complexity Low_complexity 2 30 0 5 1372 500 189 122 9 chrX 103189878 103189985 -63460311 - PB1D9 SINE Alu 0 120 2 5 1372 1098 230 15 0 chrX 103190393 103190589 -63459707 + B3 SINE B2 4 202 -14 5 1372 571 224 5 7 chrX 103190614 103190734 -63459562 + B3A SINE B2 2 119 -76 5 1372 933 198 32 32 chrX 103190855 103191043 -63459253 + B3A SINE B2 1 188 -10 5 1372 603 207 9 0 chrX 103191066 103191177 -63459119 + B1_Mur2 SINE Alu 1 112 -37 5 1372 1216 48 0 33 chrX 103191188 103191340 -63458956 + B1_Mus2 SINE Alu 1 147 0 5 1372 226 203 130 104 chrX 103191399 103191476 -63458820 - ID4 SINE ID 0 83 5 5 1372 657 271 35 7 chrX 103191497 103191642 -63458654 + RSINE1 SINE B4 3 151 -14 5 1372 1504 40 63 0 chrX 103191693 103191868 -63458428 + B2_Mm1a SINE B2 2 187 -6 5 1372 246 261 46 0 chrX 103192509 103192574 -63457722 + ID_B1 SINE B4 69 136 -88 5 1372 309 239 70 0 chrX 103192525 103192596 -63457700 + B1_Mus2 SINE Alu 6 81 -66 5 1372 675 211 59 15 chrX 103192628 103192763 -63457533 + B1_Mur2 SINE Alu 1 141 -8 5 1372 387 230 122 65 chrX 103192832 103192847 -63457449 + RSINE1 SINE B4 49 63 -102 5 1372 1735 174 242 62 chrX 103192847 103193269 -63457027 + RLTR19 LTR ERVK 1 498 -1 5 1372 387 230 122 65 chrX 103193269 103193360 -63456936 + RSINE1 SINE B4 64 161 -4 5 1372 549 228 32 24 chrX 103193458 103193584 -63456712 + B3 SINE B2 80 206 -10 5 1372 1482 67 17 0 chrX 103193602 103193781 -63456515 - B2_Mm2 SINE B2 -10 185 4 5 1372 391 284 0 121 chrX 103193851 103193883 -63456413 - PB1D10 SINE Alu -1 116 87 5 1372 918 197 10 46 chrX 103193883 103194080 -63456216 + B2_Mm2 SINE B2 2 191 -4 5 1372 391 250 31 93 chrX 103194080 103194178 -63456118 - PB1D10 SINE Alu -51 98 8 5 1372 524 150 140 0 chrX 103194240 103194340 -63455956 + B1_Mm SINE Alu 2 115 -32 5 1372 238 183 15 118 chrX 103194373 103194441 -63455855 + 4.5SRNA scRNA scRNA 26 86 -8 5 1372 252 215 62 0 chrX 103194401 103194416 -63455880 + PB1D10 SINE Alu 48 91 -26 5 1372 282 159 0 0 chrX 103194416 103194460 -63455836 + ID_B1 SINE B4 174 217 -7 5 1372 820 167 14 0 chrX 103194474 103194612 -63455684 + B1_Mur3 SINE Alu 10 149 0 5 1372 453 139 297 0 chrX 103194613 103194714 -63455582 - URR1A DNA MER1_type -95 131 1 5 1372 649 221 30 0 chrX 103194764 103194895 -63455401 - ID_B1 SINE B4 -2 222 88 5 1372 21 0 0 0 chrX 103194902 103194923 -63455373 + AT_rich Low_complexity Low_complexity 1 21 0 5 1372 34 0 0 0 chrX 103194948 103194982 -63455314 + AT_rich Low_complexity Low_complexity 1 34 0 5 1372 290 139 139 0 chrX 103194982 103195054 -63455242 - Lx4A LINE L1 0 7058 6977 5 1372 567 286 124 0 chrX 103195288 103195449 -63454847 - B3A SINE B2 -16 182 2 5 1372 945 192 106 30 chrX 103195490 103195689 -63454607 - B3 SINE B2 -2 214 1 5 1372 753 200 50 7 chrX 103195709 103195850 -63454446 - B1_Mus1 SINE Alu 0 148 2 5 1372 616 213 67 51 chrX 103195933 103196111 -63454185 - B2_Mm2 SINE B2 -14 181 1 5 1372 709 214 0 0 chrX 103196121 103196252 -63454044 - B1_Mur2 SINE Alu -1 148 18 5 1372 348 250 81 27 chrX 103196287 103196398 -63453898 + PB1D10 SINE Alu 1 117 0 6 1372 228 349 60 0 chrX 103196432 103196515 -63453781 + B1F2 SINE Alu 22 109 -40 6 1372 390 326 23 0 chrX 103196612 103196633 -63453663 - B1F1 SINE Alu -8 141 10 6 1372 399 274 19 19 chrX 103196633 103196741 -63453555 - ID_B1 SINE B4 -26 198 91 6 1372 436 293 86 8 chrX 103196759 103196876 -63453420 - B1F2 SINE Alu -21 128 3 6 1372 1007 261 0 0 chrX 103197497 103197704 -63452592 - B3 SINE B2 -6 210 4 6 1372 739 175 71 28 chrX 103197988 103198129 -63452167 + B1_Mur4 SINE Alu 4 150 0 6 1372 28 38 0 19 chrX 103198147 103198179 -63452117 + AT_rich Low_complexity Low_complexity 1 32 0 6 1372 5518 71 15 0 chrX 103198179 103198852 -63451444 + L1_Mus1 LINE L1 5885 6567 0 6 1372 28 38 0 19 chrX 103198852 103198872 -63451424 + AT_rich Low_complexity Low_complexity 1 20 0 6 1372 427 102 0 0 chrX 103198926 103198985 -63451311 - ORR1A3 LTR MaLR 0 326 268 6 1372 839 95 8 60 chrX 103198991 103199125 -63451171 - B1_Mus1 SINE Alu -2 146 20 6 1372 990 126 170 0 chrX 103199127 103199286 -63451010 - B2_Mm2 SINE B2 -8 187 2 6 1372 1485 122 43 19 chrX 103199287 103199553 -63450743 - ORR1A3 LTR MaLR -41 353 43 6 1372 1453 171 76 31 chrX 103199579 103199869 -63450427 - MTC LTR MaLR 0 421 119 6 1372 678 139 52 0 chrX 103199865 103199980 -63450316 + B1_Mur2 SINE Alu 24 144 -5 6 1372 232 294 60 53 chrX 103199868 103199984 -63450312 + B4A SINE B4 112 226 -66 6 1372 1647 26 0 31 chrX 103199984 103200180 -63450116 + B2_Mm1a SINE B2 1 190 -3 6 1372 232 294 60 53 chrX 103200180 103200196 -63450100 + B4A SINE B4 227 244 -48 6 1372 217 214 35 18 chrX 103200200 103200257 -63450039 + GA-rich Low_complexity Low_complexity 5 62 0 6 1372 237 118 0 0 chrX 103200299 103200333 -63449963 + B1_Mus2 SINE Alu 99 132 -15 6 1372 623 151 0 58 chrX 103200359 103200479 -63449817 - MTC LTR MaLR -301 120 8 6 1372 227 135 27 0 chrX 103200607 103200644 -63449652 + B3A SINE B2 6 43 -155 6 1372 1023 155 0 131 chrX 103200648 103200744 -63449552 + ORR1B1-int LTR MaLR 1284 1375 -134 6 1372 670 74 284 69 chrX 103200744 103200860 -63449436 + B1_Mus2 SINE Alu 2 142 -5 6 1372 1023 155 0 131 chrX 103200860 103201023 -63449273 + ORR1B1-int LTR MaLR 1376 1509 0 6 1372 2319 154 40 8 chrX 103201025 103201405 -63448891 + ORR1B1 LTR MaLR 3 394 0 6 1372 294 29 0 0 chrX 103201487 103201522 -63448774 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1372 207 0 0 0 chrX 103201522 103201544 -63448752 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 6 1372 264 222 0 53 chrX 103201567 103201624 -63448672 + ID SINE ID 4 57 -167 6 1372 314 298 53 0 chrX 103201626 103201720 -63448576 - PB1D7 SINE Alu -12 108 10 6 1372 259 329 24 12 chrX 103201648 103201731 -63448565 - B4A SINE B4 -125 167 84 6 1372 207 312 0 0 chrX 103201762 103201810 -63448486 - L2c LINE L2 -81 3306 3259 6 1372 228 255 359 0 chrX 103201891 103201997 -63448299 + B1F1 SINE Alu 3 146 -3 6 1372 449 275 6 51 chrX 103202152 103202309 -63447987 + B3A SINE B2 49 198 0 6 1372 348 269 161 7 chrX 103202331 103202472 -63447824 + B3 SINE B2 21 203 -13 6 1372 733 227 75 54 chrX 103202494 103202680 -63447616 - B3A SINE B2 -8 190 1 6 1372 1348 69 0 6 chrX 103202731 103202906 -63447390 + B2_Mm2 SINE B2 1 174 -21 6 1372 1549 28 61 11 chrX 103202912 103203072 -63447224 + B2_Mm1a SINE B2 1 160 -33 6 1372 280 21 20 60 chrX 103203072 103203122 -63447174 + (TAAA)n Simple_repeat Simple_repeat 3 50 0 6 1372 1549 28 61 11 chrX 103203122 103203142 -63447154 + B2_Mm1a SINE B2 161 190 -3 6 1372 244 229 46 62 chrX 103203267 103203332 -63446964 - ID4 SINE ID -17 66 3 6 1372 1010 150 14 0 chrX 103203745 103203892 -63446404 + B1_Mur4 SINE Alu 2 150 0 6 1372 274 175 0 95 chrX 103203907 103203970 -63446326 - L1MB5 LINE L1 -8 6166 6110 6 1372 303 264 517 0 chrX 103204010 103204131 -63446165 - B3 SINE B2 -5 211 28 6 1372 395 336 23 15 chrX 103204262 103204392 -63445904 + ID_B1 SINE B4 86 216 -8 6 1372 589 264 31 19 chrX 103204438 103204600 -63445696 + RSINE1 SINE B4 2 165 0 6 1372 359 263 125 10 chrX 103204644 103204740 -63445556 + B3A SINE B2 42 148 -50 6 1372 378 91 0 0 chrX 103204756 103204811 -63445485 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1372 293 227 135 11 chrX 103204895 103204984 -63445312 + B3 SINE B2 109 208 -8 6 1372 219 250 79 171 chrX 103205070 103205167 -63445129 + ID_B1 SINE B4 88 214 -10 6 1372 228 209 23 0 chrX 103205167 103205210 -63445086 + PB1D10 SINE Alu 64 107 -10 6 1372 400 287 94 17 chrX 103205495 103205676 -63444620 + B3 SINE B2 11 205 -11 6 1372 522 242 75 13 chrX 103205778 103205938 -63444358 - ID_B1 SINE B4 -44 248 80 6 1372 246 77 0 0 chrX 103206285 103206311 -63443985 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1372 368 268 70 18 chrX 103206311 103206425 -63443871 + PB1D7 SINE Alu 1 120 0 6 1372 246 77 0 0 chrX 103206425 103206437 -63443859 + (A)n Simple_repeat Simple_repeat 1 12 0 6 1372 238 371 0 0 chrX 103207546 103207635 -63442661 + PB1D10 SINE Alu 1 89 -28 6 1372 408 302 23 16 chrX 103207557 103207685 -63442611 + ID_B1 SINE B4 93 221 -3 6 1372 531 293 102 12 chrX 103207978 103208144 -63442152 + B3 SINE B2 1 181 -35 6 1372 272 174 0 0 chrX 103208233 103208279 -63442017 + MTC LTR MaLR 368 413 -8 6 1372 180 0 0 0 chrX 103208408 103208428 -63441868 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 6 1372 262 270 32 0 chrX 103208449 103208512 -63441784 - ID4_ SINE ID -17 66 2 6 1372 451 325 52 78 chrX 103208617 103208668 -63441628 + B4 SINE B4 2 50 -242 6 1372 836 182 94 22 chrX 103208668 103208848 -63441448 + B2_Mm2 SINE B2 2 194 -1 6 1372 639 237 50 27 chrX 103208848 103209026 -63441270 + ID_B1 SINE B4 51 225 -67 6 1372 224 59 29 0 chrX 103209026 103209060 -63441236 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 6 1372 486 296 0 0 chrX 103209120 103209228 -63441068 + PB1D10 SINE Alu 1 108 -9 6 1372 315 296 67 22 chrX 103209259 103209394 -63440902 + B1F SINE Alu 1 141 -8 6 1372 333 293 8 33 chrX 103209446 103209566 -63440730 + B1_Mus1 SINE Alu 31 147 -1 6 1372 1554 63 16 5 chrX 103209584 103209775 -63440521 + B2_Mm2 SINE B2 1 193 -2 6 1372 423 305 12 49 chrX 103209985 103210147 -63440149 + L1MC4a LINE L1 7265 7420 -462 6 1372 572 204 46 0 chrX 103210174 103210282 -63440014 + B1F SINE Alu 26 138 -11 6 1372 1670 27 27 0 chrX 103210300 103210487 -63439809 - B2_Mm1t SINE B2 0 193 2 6 1372 692 153 0 0 chrX 103210576 103210687 -63439609 + B1F2 SINE Alu 29 139 -10 6 1372 476 58 14 0 chrX 103212284 103212353 -63437943 - B1_Mur3 SINE Alu 0 149 80 6 1372 560 273 47 79 chrX 103212474 103212689 -63437607 - ID_B1 SINE B4 -6 218 11 6 1372 207 0 0 0 chrX 103212793 103212816 -63437480 + (TGG)n Simple_repeat Simple_repeat 1 23 0 6 1372 1367 105 28 0 chrX 103213076 103213257 -63437039 + B2_Mm1t SINE B2 1 186 -7 6 1372 677 81 0 29 chrX 103213473 103213575 -63436721 - L1_Mus1 LINE L1 -1 6566 6468 6 1372 257 232 145 0 chrX 103213700 103213769 -63436527 - PB1D10 SINE Alu -6 111 33 6 1372 1498 63 10 40 chrX 103214027 103214226 -63436070 - B2_Mm1t SINE B2 0 193 1 6 1372 1460 96 16 5 chrX 103214229 103214418 -63435878 - B2_Mm2 SINE B2 -3 192 2 6 1372 599 248 15 15 chrX 103214427 103214562 -63435734 - B1F SINE Alu -1 148 14 6 1372 895 166 14 14 chrX 103214654 103214801 -63435495 - B1_Mus1 SINE Alu 0 148 2 6 1372 429 277 0 0 chrX 103215064 103215147 -63435149 - ID4 SINE ID 0 83 1 6 1372 231 262 53 109 chrX 103215374 103215465 -63434831 + PB1D9 SINE Alu 36 142 -7 6 1372 397 336 27 20 chrX 103215767 103215913 -63434383 + B1F1 SINE Alu 1 147 -2 6 1372 510 269 51 29 chrX 103216069 103216207 -63434089 + ID_B1 SINE B4 84 224 0 6 1372 1218 95 71 6 chrX 103216426 103216595 -63433701 - B2_Mm2 SINE B2 -14 181 2 6 1372 756 147 0 44 chrX 103216688 103216823 -63433473 - B1_Mus2 SINE Alu -9 138 10 6 1372 453 194 86 0 chrX 103216824 103216917 -63433379 - MER3 DNA MER1_type -104 105 5 6 1372 1134 102 120 0 chrX 103218021 103218188 -63432108 - B2_Mm2 SINE B2 -8 187 1 6 1372 757 67 0 0 chrX 103218352 103218456 -63431840 - B1_Mus2 SINE Alu -2 145 42 6 1372 517 183 0 77 chrX 103218468 103218598 -63431698 + PB1D9 SINE Alu 1 120 0 6 1372 1226 76 0 0 chrX 103218623 103218768 -63431528 - B1_Mus1 SINE Alu -1 147 3 6 1372 1384 68 74 0 chrX 103218774 103218950 -63431346 - B2_Mm2 SINE B2 -5 190 2 6 1372 252 86 0 0 chrX 103219269 103219304 -63430992 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1372 314 294 21 115 chrX 103219304 103219400 -63430896 - RSINE1 SINE B4 -10 155 69 6 1372 203 0 37 0 chrX 103219454 103219481 -63430815 + (TTTTTA)n Simple_repeat Simple_repeat 6 33 0 6 1372 887 137 71 14 chrX 103219481 103219622 -63430674 - B1_Mur3 SINE Alu 0 149 1 6 1372 1277 48 0 0 chrX 103219638 103219785 -63430511 - B1_Mm SINE Alu 0 147 1 6 1372 399 250 83 138 chrX 103220896 103220999 -63429297 - B3A SINE B2 -26 172 80 6 1372 2547 129 70 44 chrX 103220999 103221453 -63428843 + RMER4A LTR ERVK 1 466 0 6 1372 399 250 83 138 chrX 103221453 103221530 -63428766 - B3A SINE B2 -119 79 2 6 1372 434 279 101 54 chrX 103221554 103221683 -63428613 - RSINE1 SINE B4 -2 163 29 6 1372 309 109 0 0 chrX 103221755 103221801 -63428495 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1372 567 204 240 17 chrX 103221862 103222037 -63428259 - B3 SINE B2 0 216 3 6 1372 493 210 168 0 chrX 103222047 103222166 -63428130 - B1F SINE Alu -5 144 6 7 1372 271 264 14 0 chrX 103224026 103224098 -63426198 + ID4_ SINE ID 2 74 -9 7 1372 972 142 7 0 chrX 103224381 103224529 -63425767 + B1_Mur3 SINE Alu 1 149 0 7 1372 201 156 0 22 chrX 103224770 103224791 -63425505 + (CAA)n Simple_repeat Simple_repeat 2 21 0 7 1372 1072 76 7 14 chrX 103224791 103224937 -63425359 + B1_Mus1 SINE Alu 4 148 0 7 1372 201 156 0 22 chrX 103224937 103224961 -63425335 + (CAA)n Simple_repeat Simple_repeat 1 24 0 7 1372 235 170 0 86 chrX 103225194 103225252 -63425044 - B1_Mur2 SINE Alu 0 149 97 7 1372 325 328 173 38 chrX 103225237 103225370 -63424926 - B3A SINE B2 -47 151 1 7 1372 249 268 108 12 chrX 103225434 103225517 -63424779 - PB1 SINE Alu -17 110 20 7 1372 21 0 0 0 chrX 103225524 103225545 -63424751 + AT_rich Low_complexity Low_complexity 1 21 0 7 1372 364 236 67 0 chrX 103225730 103225819 -63424477 - PB1D10 SINE Alu -1 116 22 7 1372 233 311 32 53 chrX 103225781 103225876 -63424420 + YREP_Mm Unknown Unknown 258 350 -1462 7 1372 314 247 128 12 chrX 103225996 103226082 -63424214 + PB1D10 SINE Alu 3 98 -19 7 1372 267 31 0 0 chrX 103226089 103226121 -63424175 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 7 1372 267 237 25 38 chrX 103226825 103226904 -63423392 - ID4 SINE ID 0 83 6 7 1372 698 62 0 10 chrX 103226918 103227015 -63423281 + (TTTC)n Simple_repeat Simple_repeat 2 97 0 7 1372 26 0 0 0 chrX 103227015 103227041 -63423255 + AT_rich Low_complexity Low_complexity 1 26 0 7 1372 808 123 7 7 chrX 103227063 103227202 -63423094 - Lx3A LINE L1 -152 6829 6691 7 1372 286 222 222 0 chrX 103227228 103227291 -63423005 - ID4 SINE ID -6 77 1 7 1372 228 250 42 0 chrX 103227248 103227296 -63423000 - ZP3AR Satellite Satellite -127 85 36 7 1372 189 0 0 0 chrX 103227296 103227317 -63422979 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 7 1372 515 275 30 0 chrX 103227317 103227448 -63422848 - B1F SINE Alu -10 139 5 7 1372 233 312 0 0 chrX 103227682 103227746 -63422550 + tRNA-Ala-GCG tRNA tRNA 3 66 -9 7 1372 564 271 23 0 chrX 103227863 103227992 -63422304 - B1F SINE Alu -9 140 9 7 1372 229 221 9 136 chrX 103227894 103228004 -63422292 - MT2B2 LTR ERVL -322 262 167 7 1372 452 290 146 12 chrX 103228337 103228508 -63421788 - B3A SINE B2 0 198 5 7 1372 615 283 16 36 chrX 103228527 103228721 -63421575 - B3A SINE B2 0 198 9 7 1372 322 194 79 77 chrX 103228739 103228857 -63421439 - PB1D10 SINE Alu 0 127 1 7 1372 691 190 0 0 chrX 103228866 103228982 -63421314 - ID_B1 SINE B4 -9 215 100 7 1372 344 250 31 10 chrX 103229196 103229293 -63421003 - B1F SINE Alu 0 149 51 7 1372 1127 57 0 14 chrX 103229591 103229734 -63420562 - B1_Mus1 SINE Alu -6 142 2 7 1372 290 316 63 0 chrX 103229735 103229830 -63420466 - PB1D10 SINE Alu -13 104 4 7 1372 241 305 12 0 chrX 103229917 103229999 -63420297 - ID2 SINE ID 0 83 1 7 1372 397 333 0 8 chrX 103230135 103230259 -63420037 - PB1 SINE Alu -4 123 1 7 1372 372 77 0 0 chrX 103230263 103230315 -63419981 + (TCTG)n Simple_repeat Simple_repeat 4 55 0 7 1372 261 162 0 0 chrX 103230316 103230353 -63419943 - PB1D10 SINE Alu -10 107 71 7 1372 363 261 209 0 chrX 103230388 103230503 -63419793 + ID_B1 SINE B4 81 219 -5 7 1372 572 261 15 0 chrX 103230517 103230647 -63419649 + B1F SINE Alu 1 132 -17 7 1372 383 194 147 21 chrX 103230724 103230819 -63419477 - PB1D9 SINE Alu -5 115 9 7 1372 185 308 19 0 chrX 103232010 103232062 -63418234 + MIR SINE MIR 17 69 -193 7 1372 615 273 84 25 chrX 103232331 103232534 -63417762 - ID_B1 SINE B4 -8 216 2 7 1372 272 222 0 0 chrX 103232542 103232596 -63417700 - PB1D7 SINE Alu 0 120 67 7 1372 431 282 19 0 chrX 103232593 103232696 -63417600 - B1F SINE Alu -22 127 23 7 1372 333 0 0 0 chrX 103232710 103232747 -63417549 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1372 734 131 0 0 chrX 103233165 103233287 -63417009 - B1_Mus2 SINE Alu 0 147 26 7 1372 1354 81 5 5 chrX 103233425 103233611 -63416685 + B2_Mm2 SINE B2 2 187 -8 7 1372 453 246 102 16 chrX 103233687 103233815 -63416481 - B1F2 SINE Alu -8 141 3 7 1372 592 226 16 0 chrX 103233843 103233976 -63416320 - B1F SINE Alu -1 148 13 7 1372 432 319 0 0 chrX 103234122 103234216 -63416080 - RSINE1 SINE B4 -2 163 70 7 1372 210 343 104 9 chrX 103234608 103234714 -63415582 + MIRc SINE MIR 139 254 -14 7 1372 340 329 79 6 chrX 103234737 103234902 -63415394 + MIRc SINE MIR 8 184 -84 7 1372 1230 264 8 25 chrX 103234920 103235285 -63415011 - Lx6 LINE L1 -27 7433 7075 7 1372 264 59 0 0 chrX 103235394 103235428 -63414868 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 1372 1109 58 0 0 chrX 103235428 103235565 -63414731 - B1_Mus2 SINE Alu -9 138 2 7 1372 713 164 41 0 chrX 103235631 103235753 -63414543 - B3 SINE B2 -89 127 1 7 1372 424 281 182 0 chrX 103235820 103235941 -63414355 - B3A SINE B2 -36 162 20 7 1372 394 255 54 18 chrX 103236110 103236222 -63414074 + PB1D7 SINE Alu 3 118 -2 7 1372 862 127 21 0 chrX 103236249 103236391 -63413905 - B1_Mur4 SINE Alu 0 150 6 7 1372 205 58 96 0 chrX 103236812 103236864 -63413432 + (TTTG)n Simple_repeat Simple_repeat 3 59 0 7 1372 1127 68 14 0 chrX 103236864 103237010 -63413286 - B1_Mus1 SINE Alu 0 148 1 7 1372 473 200 183 0 chrX 103237063 103237178 -63413118 - B1_Mur3 SINE Alu -11 138 3 7 1372 690 211 129 21 chrX 103238009 103238203 -63412093 + B3 SINE B2 1 215 -1 7 1372 970 128 0 0 chrX 103238771 103238912 -63411384 + B1_Mus2 SINE Alu 2 142 -5 7 1372 243 0 0 0 chrX 103238937 103238964 -63411332 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 1372 340 224 73 18 chrX 103238999 103239108 -63411188 + L1MC1 LINE L1 6214 6328 -5 7 1372 357 276 99 39 chrX 103239157 103239338 -63410958 + L1ME1 LINE L1 5499 5690 -489 7 1372 576 256 126 50 chrX 103239437 103239778 -63410518 + L1ME1 LINE L1 5689 6055 -187 7 1372 809 157 37 0 chrX 103239984 103240118 -63410178 + B1_Mur4 SINE Alu 1 139 -11 7 1372 2908 214 47 11 chrX 103240630 103241268 -63409028 - Lx6 LINE L1 0 7460 6800 7 1372 321 82 0 0 chrX 103241281 103241330 -63408966 + (TC)n Simple_repeat Simple_repeat 2 50 0 7 1372 476 224 37 128 chrX 103241584 103241748 -63408548 - RMER10A LTR ERVL -282 160 12 7 1372 553 286 0 0 chrX 103241757 103241876 -63408420 - B3A SINE B2 -74 124 6 7 1372 358 214 99 33 chrX 103242270 103242391 -63407905 - L1_Rod LINE L1 -200 5647 5519 7 1372 505 294 82 25 chrX 103242385 103242797 -63407499 + Lx8 LINE L1 5674 6114 -1530 7 1372 446 260 28 19 chrX 103242877 103242983 -63407313 + B1_Mur2 SINE Alu 4 110 -39 7 1372 234 196 39 197 chrX 103242983 103243004 -63407292 + MT2B LTR ERVL 168 274 -327 7 1372 25 0 0 0 chrX 103243121 103243146 -63407150 + AT_rich Low_complexity Low_complexity 1 25 0 7 1372 238 280 0 20 chrX 103243162 103243213 -63407083 + BC1_Mm scRNA scRNA 35 84 -68 7 1372 248 0 0 30 chrX 103243228 103243261 -63407035 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 7 1372 372 294 59 0 chrX 103243387 103243506 -63406790 + PB1 SINE Alu 2 127 0 7 1372 186 128 0 0 chrX 103243506 103243545 -63406751 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 7 1372 321 242 108 29 chrX 103243659 103243761 -63406535 - PB1D10 SINE Alu -7 110 1 7 1372 539 294 99 4 chrX 103243766 103244029 -63406267 + L1M5 LINE L1 5523 5810 -314 7 1372 406 208 0 38 chrX 103244037 103244117 -63406179 - ID4_ SINE ID -4 79 3 7 1372 682 281 60 10 chrX 103244948 103245149 -63405147 + ID_B1 SINE B4 8 218 -6 7 1372 227 234 21 31 chrX 103245233 103245330 -63404966 + T-rich Low_complexity Low_complexity 2 97 0 7 1372 192 152 0 0 chrX 103245401 103245434 -63404862 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 7 1372 554 322 11 16 chrX 103245434 103245617 -63404679 - B3A SINE B2 -15 183 2 7 1372 326 333 57 9 chrX 103245655 103245761 -63404535 - B4A SINE B4 0 292 182 7 1372 2316 91 22 0 chrX 103245827 103246147 -63404149 - ORR1A2 LTR MaLR 0 327 1 7 1372 682 219 60 33 chrX 103246147 103246291 -63404005 - B4A SINE B4 -134 158 9 7 1372 244 0 56 0 chrX 103246293 103246329 -63403967 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 7 1372 545 229 38 0 chrX 103246330 103246435 -63403861 - ID_B1 SINE B4 -15 209 101 7 1372 547 173 67 2 chrX 103246543 103246644 -63403652 + B1_Mur2 SINE Alu 35 141 -8 7 1372 922 251 14 5 chrX 103246680 103246892 -63403404 + B3 SINE B2 3 216 0 7 1372 1430 202 210 3 chrX 103247100 103247447 -63402849 - MTD LTR MaLR 0 419 1 7 1372 769 204 7 0 chrX 103247602 103247739 -63402557 - B1_Mur1 SINE Alu -2 147 10 7 1372 190 146 20 40 chrX 103247761 103247811 -63402485 + CT-rich Low_complexity Low_complexity 6 54 0 7 1372 887 239 1 59 chrX 103248116 103248333 -63401963 - B3 SINE B2 -2 193 2 7 1372 580 299 22 0 chrX 103248724 103248861 -63401435 + RSINE1 SINE B4 2 141 -24 7 1372 189 0 0 0 chrX 103248872 103248893 -63401403 + (CA)n Simple_repeat Simple_repeat 2 22 0 7 1372 1441 45 0 22 chrX 103248951 103248971 -63401325 - B2_Mm1a SINE B2 -16 177 161 8 1372 180 0 0 0 chrX 103248971 103248991 -63401305 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 8 1372 1441 45 0 22 chrX 103248991 103249150 -63401146 - B2_Mm1a SINE B2 -33 160 2 8 1372 1203 61 0 0 chrX 103249307 103249454 -63400842 - B1_Mm SINE Alu 0 147 1 8 1372 839 230 58 34 chrX 103249526 103249733 -63400563 + B3 SINE B2 1 212 -4 8 1372 1560 209 72 15 chrX 103250016 103250351 -63399945 - ORR1C1 LTR MaLR -24 354 1 8 1372 318 82 34 32 chrX 103250417 103250498 -63399798 + L1_Mm LINE L1 3796 3876 -2007 8 1372 332 264 229 21 chrX 103250505 103250838 -63399458 - L1M2 LINE L1 -3494 3055 2642 8 1372 545 243 14 21 chrX 103250838 103250981 -63399315 - B1_Mur2 SINE Alu -6 143 2 8 1372 356 264 229 21 chrX 103250981 103251159 -63399137 - L1M2 LINE L1 -3908 2641 2360 8 1372 24 32 0 0 chrX 103251601 103251632 -63398664 + AT_rich Low_complexity Low_complexity 1 31 0 8 1372 480 257 39 11 chrX 103251632 103251766 -63398530 + B1F SINE Alu 10 149 0 8 1372 578 271 51 21 chrX 103252142 103252376 -63397920 + L1M3 LINE L1 5507 5747 -436 8 1372 814 194 27 69 chrX 103252593 103252781 -63397515 - B3A SINE B2 -17 181 2 8 1372 585 279 0 54 chrX 103252785 103252933 -63397363 - ID_B1 SINE B4 -3 221 82 8 1372 257 233 88 55 chrX 103252958 103253049 -63397247 - Tigger13a DNA MER2_type -131 640 547 8 1372 854 217 24 38 chrX 103253082 103253293 -63397003 - B3 SINE B2 -5 211 4 8 1372 912 209 51 9 chrX 103253373 103253493 -63396803 - URR1A DNA MER1_type 0 226 104 8 1372 2103 42 19 0 chrX 103253493 103253757 -63396539 + L1_Mus1 LINE L1 6297 6565 -2 8 1372 912 209 51 9 chrX 103253757 103253853 -63396443 - URR1A DNA MER1_type -123 103 2 8 1372 411 326 92 4 chrX 103253895 103254123 -63396173 - Tigger13a DNA MER2_type -364 407 160 8 1372 355 260 83 44 chrX 103254356 103254537 -63395759 - MLT1N2 LTR MaLR -2 560 373 8 1372 183 42 0 0 chrX 103254576 103254600 -63395696 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 8 1372 1009 40 0 0 chrX 103254601 103254726 -63395570 - B1_Mm SINE Alu -1 146 22 8 1372 633 249 101 16 chrX 103254819 103255007 -63395289 - ID_B1 SINE B4 -19 205 2 8 1372 801 193 14 7 chrX 103255100 103255241 -63395055 - B1_Mus1 SINE Alu 0 148 7 8 1372 519 284 0 43 chrX 103255241 103255262 -63395034 - ID_B1 SINE B4 0 224 70 8 1372 729 289 31 80 chrX 103255268 103255494 -63394802 + B4A SINE B4 78 292 0 8 1372 703 285 68 34 chrX 103256117 103256382 -63393914 + B4A SINE B4 1 274 -18 8 1372 322 296 37 0 chrX 103256474 103256555 -63393741 - PB1D7 SINE Alu -8 112 29 8 1372 238 160 20 0 chrX 103256556 103256606 -63393690 - L1MC LINE L1 -750 5396 5346 8 1372 776 129 7 90 chrX 103256621 103256766 -63393530 - B1_Mus2 SINE Alu 0 147 15 8 1372 621 323 52 16 chrX 103256798 103256990 -63393306 - B4 SINE B4 -10 282 84 8 1372 350 195 12 0 chrX 103257006 103257088 -63393208 + (TA)n Simple_repeat Simple_repeat 1 83 0 8 1372 260 70 23 0 chrX 103257092 103257135 -63393161 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1372 937 228 6 0 chrX 103257135 103257293 -63393003 - B3 SINE B2 -56 160 2 8 1372 1015 173 0 15 chrX 103257352 103257552 -63392744 - Lx9 LINE L1 -350 7294 7098 8 1372 764 208 14 20 chrX 103257704 103257851 -63392445 - B1_Mur1 SINE Alu 0 149 4 8 1372 285 176 0 0 chrX 103259267 103259318 -63390978 - B1_Mm SINE Alu 0 147 97 8 1372 614 184 28 0 chrX 103259517 103259626 -63390670 + PB1D9 SINE Alu 2 113 -7 8 1372 313 161 0 82 chrX 103259642 103259703 -63390593 + PB1D10 SINE Alu 46 101 -16 8 1372 261 0 0 0 chrX 103259703 103259732 -63390564 + (TC)n Simple_repeat Simple_repeat 2 30 0 8 1372 351 0 0 0 chrX 103259732 103259770 -63390526 + (TA)n Simple_repeat Simple_repeat 2 40 0 8 1372 322 306 110 9 chrX 103259772 103259881 -63390415 + PB1D7 SINE Alu 1 120 0 8 1372 432 258 164 0 chrX 103259885 103260013 -63390283 + B1F SINE Alu 1 149 0 8 1372 361 336 23 15 chrX 103260288 103260421 -63389875 - MER20 DNA MER1_type -4 215 82 8 1372 564 285 14 7 chrX 103260621 103260759 -63389537 - B1_Mur2 SINE Alu 0 149 11 8 1372 315 151 219 0 chrX 103261690 103261763 -63388533 - MTEa LTR MaLR 0 379 291 8 1372 379 218 26 0 chrX 103261767 103261867 -63388429 + L1M3 LINE L1 5383 5486 -687 8 1372 30 0 0 0 chrX 103261894 103261924 -63388372 + AT_rich Low_complexity Low_complexity 1 30 0 8 1372 1279 274 108 13 chrX 103261966 103262575 -63387721 + L1MB8 LINE L1 5476 6142 -36 8 1372 360 190 12 83 chrX 103262643 103262741 -63387555 + ID4 SINE ID 6 96 -56 8 1372 515 289 46 10 chrX 103262802 103262998 -63387298 + L1MB7 LINE L1 5816 6018 -166 8 1372 543 323 0 6 chrX 103263037 103263196 -63387100 - RSINE1 SINE B4 -4 161 4 8 1372 299 311 7 22 chrX 103263212 103263350 -63386946 + L1MB7 LINE L1 6028 6163 -21 8 1372 573 240 86 13 chrX 103263368 103263520 -63386776 + RSINE1 SINE B4 2 164 -1 8 1372 398 228 65 65 chrX 103263588 103263600 -63386696 - PB1D10 SINE Alu -6 111 100 8 1372 904 214 77 0 chrX 103263600 103263796 -63386500 - B3 SINE B2 -5 211 1 8 1372 398 228 65 65 chrX 103263796 103263891 -63386405 - PB1D10 SINE Alu -18 99 4 8 1372 531 319 80 0 chrX 103263895 103264058 -63386238 - MLT1F1 LTR MaLR -393 176 1 8 1372 1254 169 14 0 chrX 103264059 103264278 -63386018 - URR1B DNA MER1_type 0 225 4 8 1372 247 364 61 93 chrX 103264284 103264660 -63385636 - L2a LINE L2 -114 3312 2949 8 1372 415 287 184 0 chrX 103264749 103264885 -63385411 - RSINE1 SINE B4 -4 161 1 8 1372 1487 58 5 5 chrX 103265310 103265501 -63384795 + B2_Mm2 SINE B2 2 192 -3 8 1372 249 33 0 0 chrX 103265610 103265640 -63384656 + (CTA)n Simple_repeat Simple_repeat 3 32 0 8 1372 443 218 0 22 chrX 103265820 103265909 -63384387 - PB1D10 SINE Alu -9 108 22 8 1372 236 269 29 88 chrX 103265852 103265954 -63384342 - B4A SINE B4 -128 164 69 8 1372 367 284 0 0 chrX 103266141 103266215 -63384081 - ID4 SINE ID -7 76 3 8 1372 276 265 123 41 chrX 103266225 103266347 -63383949 - B1F SINE Alu 0 149 18 8 1372 359 310 41 47 chrX 103266462 103266600 -63383696 - B1F SINE Alu -14 135 4 8 1372 565 317 21 10 chrX 103266623 103266784 -63383512 - ID_B1 SINE B4 -41 251 82 8 1372 1005 208 19 19 chrX 103267079 103267295 -63383001 - B3 SINE B2 0 216 1 8 1372 455 235 43 0 chrX 103267315 103267430 -63382866 - PB1D7 SINE Alu 0 120 1 8 1372 1236 41 0 0 chrX 103267440 103267587 -63382709 - B1_Mm SINE Alu 0 147 1 8 1372 769 299 26 22 chrX 103267644 103267870 -63382426 - B4A SINE B4 0 292 66 8 1372 326 270 103 17 chrX 103268111 103268228 -63382068 + B1F SINE Alu 19 145 -4 8 1372 389 233 9 112 chrX 103268636 103268752 -63381544 - PB1D7 SINE Alu -7 113 10 8 1372 670 273 82 0 chrX 103270113 103270307 -63379989 - B3 SINE B2 -6 210 1 8 1372 497 279 128 31 chrX 103270314 103270510 -63379786 - ID_B1 SINE B4 -6 218 4 8 1372 342 336 37 9 chrX 103270908 103271016 -63379280 + Arthur1 DNA Tip100 9 119 -3828 8 1372 283 175 44 73 chrX 103271012 103271080 -63379216 - PB1D10 SINE Alu 0 117 52 8 1372 317 296 125 0 chrX 103271157 103271245 -63379051 - PB1D10 SINE Alu -11 106 8 8 1372 552 315 101 46 chrX 103271250 103271576 -63378720 + Arthur1 DNA Tip100 104 447 -3500 8 1372 28 71 0 0 chrX 103271584 103271640 -63378656 + AT_rich Low_complexity Low_complexity 1 56 0 8 1372 650 284 95 79 chrX 103271653 103272047 -63378249 + Arthur1 DNA Tip100 3380 3783 -164 8 1372 327 293 147 0 chrX 103272047 103272163 -63378133 - B1_Mur2 SINE Alu -16 133 1 8 1372 650 284 95 79 chrX 103272163 103272211 -63378085 + Arthur1 DNA Tip100 3784 3829 -118 8 1372 4474 56 19 14 chrX 103272361 103272941 -63377355 - L1Md_F2 LINE L1 -13 6569 5987 8 1372 3039 39 13 8 chrX 103272958 103273351 -63376945 + L1Md_F2 LINE L1 5588 5982 -600 8 1372 239 253 125 12 chrX 103273351 103273431 -63376865 - PB1D10 SINE Alu -58 91 3 8 1372 249 256 67 44 chrX 103273437 103273572 -63376724 + Arthur1 DNA Tip100 3809 3946 -1 8 1372 400 165 19 93 chrX 103274402 103274509 -63375787 + B4A SINE B4 1 99 -193 8 1372 824 231 56 27 chrX 103274837 103275034 -63375262 + B3 SINE B2 18 216 0 8 1372 369 0 0 0 chrX 103275323 103275364 -63374932 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1372 619 319 0 53 chrX 103275532 103275701 -63374595 - RSINE1 SINE B4 -1 164 5 8 1372 719 226 20 33 chrX 103275957 103276108 -63374188 - B1F SINE Alu 0 149 1 8 1372 298 375 59 53 chrX 103276108 103276163 -63374133 - B4 SINE B4 -208 84 29 8 1372 277 360 11 11 chrX 103276629 103276719 -63373577 + L2b LINE L2 3286 3375 0 8 1372 303 227 126 0 chrX 103276835 103276909 -63373387 - B3 SINE B2 -108 87 5 8 1372 502 276 47 0 chrX 103276919 103277046 -63373250 - B1F SINE Alu -2 147 15 8 1372 892 177 14 7 chrX 103277234 103277382 -63372914 - B1_Mur4 SINE Alu 0 150 2 8 1372 21 36 0 0 chrX 103277436 103277464 -63372832 + AT_rich Low_complexity Low_complexity 1 28 0 8 1372 197 319 54 27 chrX 103278072 103278146 -63372150 + L2b LINE L2 3284 3359 -16 8 1372 285 295 0 0 chrX 103278286 103278347 -63371949 - tRNA-Ala-GCY_ tRNA tRNA -14 61 1 8 1372 661 325 75 20 chrX 103278458 103278712 -63371584 - B4A SINE B4 -23 269 2 8 1372 289 149 30 0 chrX 103278805 103278872 -63371424 + (TA)n Simple_repeat Simple_repeat 1 69 0 8 1372 23 0 0 0 chrX 103279203 103279226 -63371070 + AT_rich Low_complexity Low_complexity 1 23 0 8 1372 2456 195 24 28 chrX 103279371 103279873 -63370423 - RLTR16 LTR ERVK 0 505 6 8 1372 216 0 0 0 chrX 103279874 103279898 -63370398 + (CA)n Simple_repeat Simple_repeat 2 25 0 8 1372 691 278 204 11 chrX 103279907 103280306 -63369990 - Lx9 LINE L1 -272 7372 6961 8 1372 209 286 134 62 chrX 103280321 103280515 -63369781 - MIRm SINE MIR -35 241 34 8 1372 607 268 7 7 chrX 103282262 103282405 -63367891 - B1_Mur2 SINE Alu -6 143 1 9 1372 207 0 0 0 chrX 103282489 103282512 -63367784 + (T)n Simple_repeat Simple_repeat 1 23 0 9 1372 627 130 8 15 chrX 103282512 103282617 -63367679 - B1_Mus2 SINE Alu 0 147 20 9 1372 640 168 109 23 chrX 103282622 103282742 -63367554 + B1_Mus2 SINE Alu 5 138 -9 9 1372 234 0 0 0 chrX 103282742 103282768 -63367528 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 9 1372 1690 16 0 0 chrX 103282785 103282972 -63367324 + B2_Mm1a SINE B2 1 187 -6 9 1372 484 266 82 56 chrX 103283079 103283162 -63367134 + Tigger7 DNA MER2_type 2288 2377 -114 9 1372 315 49 0 0 chrX 103283162 103283203 -63367093 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1372 484 266 82 56 chrX 103283203 103283314 -63366982 + Tigger7 DNA MER2_type 2378 2486 -5 9 1373 694 164 0 0 chrX 103284772 103284882 -63365414 + B1_Mur2 SINE Alu 40 149 0 9 1373 25 0 0 0 chrX 103285350 103285375 -63364921 + AT_rich Low_complexity Low_complexity 1 25 0 9 1373 360 0 0 0 chrX 103285459 103285499 -63364797 + (TC)n Simple_repeat Simple_repeat 1 40 0 9 1373 940 163 0 0 chrX 103285500 103285647 -63364649 - B1_Mur3 SINE Alu 0 149 3 9 1373 25 0 0 0 chrX 103285711 103285736 -63364560 + AT_rich Low_complexity Low_complexity 1 25 0 9 1373 279 187 152 45 chrX 103285751 103285863 -63364433 - Lx4B LINE L1 -7 7051 6928 9 1373 279 0 0 0 chrX 103286286 103286317 -63363979 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 9 1373 970 224 44 0 chrX 103286317 103286522 -63363774 - ID_B1 SINE B4 -9 215 2 9 1373 207 0 0 0 chrX 103286526 103286549 -63363747 + (T)n Simple_repeat Simple_repeat 1 23 0 9 1373 374 231 29 0 chrX 103286716 103286820 -63363476 + L1MC5 LINE L1 7691 7797 -164 9 1373 328 211 34 11 chrX 103286869 103286956 -63363340 + PB1 SINE Alu 49 127 0 9 1373 594 264 0 54 chrX 103286958 103287106 -63363190 + B1_Mur1 SINE Alu 1 140 -9 9 1373 380 256 136 8 chrX 103287746 103287864 -63362432 + RSINE1 SINE B4 2 134 -31 9 1373 429 250 28 0 chrX 103287885 103287993 -63362303 + PB1D9 SINE Alu 5 115 -5 9 1373 495 164 133 0 chrX 103288212 103288340 -63361956 - Lx7 LINE L1 0 7696 7552 9 1373 1053 225 51 44 chrX 103288634 103289024 -63361272 - Lx7 LINE L1 -160 7536 7144 9 1373 541 226 131 42 chrX 103289369 103289568 -63360728 - B3A SINE B2 0 195 2 9 1373 234 347 0 8 chrX 103289869 103289991 -63360305 - L1MB8 LINE L1 -17 6161 6041 9 1373 297 0 0 0 chrX 103290753 103290786 -63359510 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 9 1373 1284 56 0 0 chrX 103290786 103290946 -63359350 - B2_Mm2 SINE B2 -34 161 2 9 1373 23 33 0 0 chrX 103291006 103291036 -63359260 + AT_rich Low_complexity Low_complexity 1 30 0 9 1373 687 0 0 0 chrX 103291640 103291718 -63358578 - L1Md_A LINE L1 -203 6379 6302 9 1373 1703 5 0 0 chrX 103291718 103291911 -63358385 + L1Md_A LINE L1 6390 6582 0 9 1373 749 230 31 46 chrX 103292413 103292609 -63357687 - B3A SINE B2 -2 196 4 9 1373 343 208 26 13 chrX 103293008 103293086 -63357210 + ID4_ SINE ID 2 80 -3 9 1373 306 50 0 0 chrX 103293108 103293148 -63357148 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 9 1373 814 60 197 0 chrX 103293148 103293265 -63357031 - B1_Mus2 SINE Alu -7 140 1 9 1373 730 111 9 0 chrX 103293453 103293561 -63356735 + B1_Mur3 SINE Alu 41 149 0 9 1373 342 148 0 0 chrX 103293564 103293576 -63356720 + (A)n Simple_repeat Simple_repeat 1 12 0 9 1373 1259 20 0 0 chrX 103293576 103293723 -63356573 + B1_Mus2 SINE Alu 1 147 0 9 1373 342 148 0 0 chrX 103293723 103293771 -63356525 + (A)n Simple_repeat Simple_repeat 1 48 0 9 1373 1639 72 9 18 chrX 103294445 103294671 -63355625 + L1Md_F2 LINE L1 6348 6571 -11 9 1373 222 39 17 103 chrX 103294771 103294829 -63355467 + T-rich Low_complexity Low_complexity 2 54 0 9 1373 927 40 159 0 chrX 103294833 103294959 -63355337 - B1_Mm SINE Alu 0 147 2 9 1373 591 286 32 0 chrX 103296009 103296163 -63354133 - RSINE1 SINE B4 -4 161 3 9 1373 883 161 0 14 chrX 103296358 103296497 -63353799 + B1_Mur4 SINE Alu 1 137 -13 9 1373 216 279 15 103 chrX 103296527 103296595 -63353701 + B4A SINE B4 85 146 -146 9 1373 376 261 0 0 chrX 103296551 103296620 -63353676 + PB1D10 SINE Alu 18 86 -31 9 1373 459 258 31 0 chrX 103296873 103296970 -63353326 - PB1D10 SINE Alu -17 100 1 9 1373 228 67 0 0 chrX 103297555 103297585 -63352711 + (A)n Simple_repeat Simple_repeat 1 30 0 9 1373 548 260 166 7 chrX 103298269 103298420 -63351876 + B3A SINE B2 1 175 -23 9 1373 748 224 96 0 chrX 103298427 103298583 -63351713 - B3 SINE B2 -45 171 1 9 1373 42 0 0 0 chrX 103298710 103298752 -63351544 + AT_rich Low_complexity Low_complexity 1 42 0 9 1373 1204 21 0 0 chrX 103298760 103298900 -63351396 - B1_Mus1 SINE Alu -8 140 1 9 1373 723 285 33 20 chrX 103299538 103299746 -63350550 - B3A SINE B2 -3 192 1 9 1373 426 39 0 0 chrX 103299777 103299829 -63350467 + (TG)n Simple_repeat Simple_repeat 1 52 0 9 1373 522 0 0 0 chrX 103299829 103299886 -63350410 + (GA)n Simple_repeat Simple_repeat 1 58 0 9 1373 376 331 35 7 chrX 103299901 103300044 -63350252 - RSINE1 SINE B4 -16 149 3 9 1373 995 186 66 50 chrX 103301229 103301427 -63348869 - B3 SINE B2 -14 202 2 9 1373 822 251 35 40 chrX 103301451 103301650 -63348646 - B3A SINE B2 0 198 1 9 1373 481 271 0 7 chrX 103301735 103301876 -63348420 - L1MC4 LINE L1 -215 7827 7688 9 1373 5297 37 11 3 chrX 103302829 103303474 -63346822 - L1Md_F2 LINE L1 0 6582 5933 9 1373 254 250 14 14 chrX 103303494 103303567 -63346729 + ID4 SINE ID 2 74 -9 9 1373 761 104 47 23 chrX 103303577 103303705 -63346591 + B1_Mus2 SINE Alu 17 147 0 9 1373 322 269 15 0 chrX 103303708 103303775 -63346521 + ID_B1 SINE B4 148 215 -9 9 1373 24 32 0 0 chrX 103304139 103304170 -63346126 + AT_rich Low_complexity Low_complexity 1 31 0 9 1373 596 298 77 0 chrX 103304227 103304408 -63345888 - B3A SINE B2 0 198 4 9 1373 358 289 16 24 chrX 103304417 103304541 -63345755 - PB1 SINE Alu -4 123 1 9 1373 415 270 56 35 chrX 103304552 103304694 -63345602 - B1F2 SINE Alu 0 149 5 9 1373 7246 203 63 9 chrX 103305376 103307225 -63343071 - Lx6 LINE L1 -2 7458 5493 9 1373 2285 227 31 44 chrX 103307253 103307825 -63342471 - Lx7 LINE L1 -801 6895 6331 9 1373 198 0 0 0 chrX 103307850 103307872 -63342424 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 9 1373 288 163 0 0 chrX 103308277 103308320 -63341976 + ID4 SINE ID 34 76 -7 9 1373 738 333 29 120 chrX 103308333 103308529 -63341767 - L2 LINE L2 -654 2765 2584 9 1373 991 206 20 10 chrX 103308529 103308730 -63341566 + B3 SINE B2 1 203 -13 9 1373 738 333 29 120 chrX 103308730 103309024 -63341272 - L2 LINE L2 -836 2583 2320 9 1373 519 309 65 38 chrX 103309024 103309209 -63341087 - MER3 DNA MER1_type 0 209 20 9 1373 668 323 242 15 chrX 103309258 103309792 -63340504 - L2 LINE L2 -1430 1989 1335 9 1373 897 142 15 0 chrX 103309792 103309926 -63340370 + B1_Mus2 SINE Alu 12 147 0 9 1373 196 333 27 55 chrX 103309937 103310010 -63340286 - L2 LINE L2 -2076 1343 1273 9 1373 682 239 36 0 chrX 103310820 103310958 -63339338 + ID_B1 SINE B4 82 224 0 9 1373 578 239 29 7 chrX 103311073 103311212 -63339084 + B1_Mur2 SINE Alu 2 143 -6 9 1373 24 32 0 0 chrX 103311387 103311418 -63338878 + AT_rich Low_complexity Low_complexity 1 31 0 9 1373 469 313 99 28 chrX 103311513 103311766 -63338530 - B4A SINE B4 -19 273 3 9 1373 611 256 136 0 chrX 103311774 103311965 -63338331 - ID_B1 SINE B4 -7 217 1 9 1373 689 246 14 129 chrX 103312042 103312252 -63338044 + B3A SINE B2 1 186 -7 9 1373 290 254 0 0 chrX 103312267 103312334 -63337962 + ID4 SINE ID 4 70 -13 9 1373 445 338 116 7 chrX 103312680 103312826 -63337470 - RSINE1 SINE B4 0 165 4 9 1373 629 296 25 25 chrX 103314177 103314340 -63335956 - RSINE1 SINE B4 -1 164 2 9 1373 235 94 0 0 chrX 103314499 103314531 -63335765 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 1373 603 195 0 0 chrX 103314531 103314654 -63335642 + (TA)n Simple_repeat Simple_repeat 2 124 0 9 1373 335 285 48 0 chrX 103314697 103314843 -63335453 - L1M5 LINE L1 -2062 5820 5673 9 1373 876 260 29 0 chrX 103314976 103315184 -63335112 + B3 SINE B2 3 216 0 9 1373 933 167 194 0 chrX 103315211 103315391 -63334905 + B3 SINE B2 2 216 0 9 1373 194 95 0 106 chrX 103316043 103316090 -63334206 + T-rich Low_complexity Low_complexity 1 42 0 9 1373 810 59 246 0 chrX 103316090 103316208 -63334088 - B1_Mm SINE Alu 0 147 1 9 1373 1693 82 4 62 chrX 103316218 103316252 -63334044 - L1_Mus2 LINE L1 0 6566 6547 9 1373 1642 26 5 0 chrX 103316252 103316443 -63333853 - B2_Mm1t SINE B2 0 193 2 9 1373 1693 82 4 62 chrX 103316443 103316668 -63333628 - L1_Mus2 LINE L1 -20 6546 6322 9 1373 42 20 0 0 chrX 103317332 103317381 -63332915 + AT_rich Low_complexity Low_complexity 1 49 0 9 1373 558 256 45 0 chrX 103317883 103318016 -63332280 + B1F1 SINE Alu 5 143 -6 9 1373 410 247 10 40 chrX 103318104 103318205 -63332091 + PB1D9 SINE Alu 18 115 -5 9 1373 219 139 28 0 chrX 103318205 103318241 -63332055 + GA-rich Low_complexity Low_complexity 3 39 0 9 1373 333 62 0 0 chrX 103318248 103318296 -63332000 + (TG)n Simple_repeat Simple_repeat 1 48 0 9 1373 304 277 71 0 chrX 103318446 103318587 -63331709 + L1M5 LINE L1 5621 5771 -469 9 1373 928 273 70 8 chrX 103318913 103319171 -63331125 - B4A SINE B4 -14 278 5 9 1373 248 192 24 49 chrX 103319186 103319268 -63331028 + Lx4B LINE L1 6975 7054 -4 9 1373 29 0 0 0 chrX 103319268 103319297 -63330999 + AT_rich Low_complexity Low_complexity 1 29 0 9 1373 420 222 83 9 chrX 103319348 103319457 -63330839 + PB1D10 SINE Alu 1 117 0 1 1373 278 194 210 0 chrX 103320585 103320647 -63329649 + PB1D10 SINE Alu 35 109 -8 1 1373 25 0 0 0 chrX 103320985 103321010 -63329286 + AT_rich Low_complexity Low_complexity 1 25 0 1 1373 186 227 0 0 chrX 103321957 103322001 -63328295 + (TATG)n Simple_repeat Simple_repeat 3 46 0 1 1373 223 182 0 0 chrX 103322024 103322068 -63328228 + GA-rich Low_complexity Low_complexity 2 45 0 1 1373 25 51 0 0 chrX 103322367 103322406 -63327890 + AT_rich Low_complexity Low_complexity 1 39 0 1 1373 24 53 0 0 chrX 103322550 103322588 -63327708 + AT_rich Low_complexity Low_complexity 1 38 0 1 1373 387 169 0 0 chrX 103322638 103322709 -63327587 + CT-rich Low_complexity Low_complexity 3 73 0 1 1373 678 13 0 0 chrX 103322791 103322870 -63327426 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 1 1373 239 313 226 0 chrX 103323558 103323673 -63326623 - RMER15 LTR ERVL -13 562 422 1 1373 1586 98 41 0 chrX 103324109 103324354 -63325942 - Lx LINE L1 -7 6647 6393 1 1373 371 244 192 8 chrX 103324635 103324755 -63325541 - B1F2 SINE Alu -7 142 1 1 1373 438 269 69 0 chrX 103325190 103325320 -63324976 + B1F SINE Alu 1 139 -10 1 1373 499 315 104 40 chrX 103325321 103325696 -63324600 - MLT1D LTR MaLR -63 442 14 1 1373 191 286 23 45 chrX 103325705 103325793 -63324503 + MIRb SINE MIR 105 190 -78 1 1373 1186 48 0 7 chrX 103325845 103325993 -63324303 - B1_Mus1 SINE Alu -1 147 1 1 1373 520 267 129 8 chrX 103327126 103327258 -63323038 + RSINE1 SINE B4 4 151 -14 1 1373 405 0 0 0 chrX 103327259 103327304 -63322992 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1373 1241 34 0 0 chrX 103327319 103327466 -63322830 + B1_Mus1 SINE Alu 2 148 0 1 1373 442 250 90 8 chrX 103327489 103327622 -63322674 + MER5A1 DNA MER1_type 2 145 -21 1 1373 323 203 17 0 chrX 103327637 103327696 -63322600 + ID_B1 SINE B4 104 163 -61 1 1373 183 129 0 0 chrX 103327740 103327771 -63322525 + (GGAA)n Simple_repeat Simple_repeat 4 34 0 1 1373 293 271 187 66 chrX 103328057 103328223 -63322073 - L2a LINE L2 -1 3425 3240 1 1373 277 333 81 6 chrX 103328918 103329078 -63321218 - L2a LINE L2 -197 3229 3058 1 1373 312 242 43 11 chrX 103329081 103329173 -63321123 + MER53 DNA hAT 99 193 0 1 1373 441 0 0 0 chrX 103329320 103329369 -63320927 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1373 812 117 102 0 chrX 103329384 103329512 -63320784 + B1_Mur2 SINE Alu 2 142 -7 1 1373 453 256 16 41 chrX 103329531 103329653 -63320643 + PB1 SINE Alu 5 123 -4 1 1373 260 335 23 99 chrX 103329653 103329825 -63320471 - L2a LINE L2 -887 2532 2374 1 1373 267 191 0 0 chrX 103329849 103329891 -63320405 - ORR1E LTR MaLR -315 44 3 1 1373 303 203 15 59 chrX 103329947 103330015 -63320281 + B3 SINE B2 144 208 -8 1 1373 396 0 0 0 chrX 103330072 103330116 -63320180 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1373 322 268 0 0 chrX 103330117 103330188 -63320108 - ID4_ SINE ID -11 72 2 1 1373 433 357 97 38 chrX 103330295 103330668 -63319628 + MLT2F LTR ERVL 1 395 -268 1 1373 1300 260 59 14 chrX 103331797 103332152 -63318144 + Lx5 LINE L1 6496 6866 -184 1 1373 298 145 0 16 chrX 103332160 103332223 -63318073 + T-rich Low_complexity Low_complexity 4 65 0 1 1373 1236 54 0 0 chrX 103332224 103332372 -63317924 - B1_Mus1 SINE Alu 0 148 1 1 1373 414 132 0 0 chrX 103332383 103332459 -63317837 + (T)n Simple_repeat Simple_repeat 1 76 0 1 1373 2565 10 0 0 chrX 103332499 103332787 -63317509 - L1Md_A LINE L1 0 6582 6295 1 1373 749 218 17 11 chrX 103332788 103332964 -63317332 + Lx6 LINE L1 7258 7434 -26 1 1373 347 176 11 0 chrX 103332971 103333062 -63317234 + (TA)n Simple_repeat Simple_repeat 2 93 0 1 1373 392 299 70 89 chrX 103333494 103333535 -63316761 + B4A SINE B4 1 40 -252 1 1373 1008 22 14 81 chrX 103333535 103333683 -63316613 + B1_Mm SINE Alu 1 138 -9 1 1373 999 48 0 0 chrX 103333683 103333808 -63316488 + (CAAAA)n Simple_repeat Simple_repeat 2 126 0 1 1373 392 299 70 89 chrX 103333808 103333923 -63316373 + B4A SINE B4 41 154 -138 1 1373 22 0 0 0 chrX 103334039 103334061 -63316235 + AT_rich Low_complexity Low_complexity 1 22 0 1 1373 413 91 0 29 chrX 103334103 103334171 -63316125 + (TATG)n Simple_repeat Simple_repeat 2 67 0 1 1373 282 282 0 78 chrX 103334171 103334248 -63316048 + ID4_ SINE ID 11 81 -2 1 1373 344 41 41 0 chrX 103335087 103335136 -63315160 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 1 1373 213 39 0 0 chrX 103335481 103335507 -63314789 + (ATG)n Simple_repeat Simple_repeat 1 26 0 1 1373 677 221 14 28 chrX 103335508 103335652 -63314644 - B1_Mur3 SINE Alu -7 142 1 1 1373 182 91 30 0 chrX 103335669 103335702 -63314594 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1373 704 256 103 39 chrX 103335704 103335907 -63314389 - MTD LTR MaLR -111 308 93 1 1373 523 206 10 0 chrX 103335908 103336010 -63314286 + MTD LTR MaLR 303 405 -14 1 1373 534 313 16 27 chrX 103336063 103336247 -63314049 + Lx8 LINE L1 7160 7341 -132 1 1373 636 306 31 0 chrX 103336252 103336412 -63313884 + B3A SINE B2 1 165 -33 1 1373 2213 168 8 5 chrX 103336438 103336809 -63313487 - ORR1D1 LTR MaLR 0 374 3 1 1373 27 0 0 0 chrX 103336995 103337022 -63313274 + AT_rich Low_complexity Low_complexity 1 27 0 1 1373 232 205 0 0 chrX 103337083 103337122 -63313174 - RSINE1 SINE B4 -123 42 4 1 1373 327 265 12 12 chrX 103337125 103337209 -63313087 - ID_B1 SINE B4 -28 196 113 1 1373 1704 147 211 0 chrX 103337268 103337580 -63312716 - ORR1C1 LTR MaLR 0 378 1 1 1373 315 328 0 8 chrX 103337588 103337705 -63312591 - Lx9 LINE L1 -187 7457 7342 1 1373 1094 229 151 22 chrX 103337746 103338117 -63312179 + MTD LTR MaLR 1 419 0 1 1373 252 291 54 72 chrX 103338728 103338839 -63311457 - PB1D10 SINE Alu -5 112 4 1 1373 294 259 12 0 chrX 103339005 103339086 -63311210 - ID_B1 SINE B4 -1 223 142 1 1373 27 62 0 0 chrX 103339138 103339186 -63311110 + AT_rich Low_complexity Low_complexity 1 48 0 1 1373 540 243 20 54 chrX 103339224 103339372 -63310924 - B1_Mur1 SINE Alu -1 148 6 1 1373 681 208 0 17 chrX 103339472 103339648 -63310648 + CT-rich Low_complexity Low_complexity 1 173 0 1 1373 806 228 5 22 chrX 103339667 103339851 -63310445 - ID_B1 SINE B4 -32 192 12 1 1373 7488 59 16 9 chrX 103339944 103340879 -63309417 + L1_Mus1 LINE L1 5626 6567 0 1 1373 839 211 32 0 chrX 103340891 103341081 -63309215 + B3A SINE B2 2 197 -1 1 1373 256 330 33 0 chrX 103341064 103341155 -63309141 - ORSL DNA Tip100 -180 95 2 1 1373 388 293 83 0 chrX 103341240 103341373 -63308923 - B1_Mur1 SINE Alu -5 144 1 1 1373 537 276 76 0 chrX 103341444 103341589 -63308707 - RSINE1 SINE B4 -5 160 5 1 1373 556 221 78 35 chrX 103341665 103341806 -63308490 + ID_B1 SINE B4 78 224 0 1 1373 980 188 115 0 chrX 103342264 103342456 -63307840 - B3 SINE B2 0 216 3 1 1373 2367 215 22 94 chrX 103342806 103343474 -63306822 - RMER20B LTR ERVK 0 627 8 1 1373 189 0 0 0 chrX 103343996 103344017 -63306279 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1373 294 231 93 36 chrX 103344017 103344156 -63306140 - B1F1 SINE Alu -2 147 1 1 1373 442 128 0 25 chrX 103344494 103344505 -63305791 - B1_Mur4 SINE Alu -4 146 138 1 1373 357 125 0 0 chrX 103344505 103344561 -63305735 + (TTCA)n Simple_repeat Simple_repeat 3 58 0 1 1373 442 128 0 25 chrX 103344561 103344629 -63305667 - B1_Mur4 SINE Alu -13 137 70 1 1373 439 246 64 50 chrX 103344630 103344771 -63305525 - B1F1 SINE Alu -6 143 1 1 1373 324 0 0 0 chrX 103345331 103345367 -63304929 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1373 253 275 209 0 chrX 103345512 103345603 -63304693 - PB1D10 SINE Alu -6 111 2 1 1373 419 225 82 44 chrX 103345722 103345857 -63304439 + RSINE1 SINE B4 16 155 -10 1 1373 285 169 0 0 chrX 103345882 103345941 -63304355 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 1373 180 0 0 0 chrX 103345945 103345965 -63304331 + (TTAAA)n Simple_repeat Simple_repeat 2 21 0 1 1373 1089 82 0 14 chrX 103346280 103346291 -63304005 - B1_Mus1 SINE Alu -1 147 137 1 1373 1286 78 0 6 chrX 103346291 103346472 -63303824 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1373 1089 82 0 14 chrX 103346472 103346608 -63303688 - B1_Mus1 SINE Alu -12 136 2 1 1373 302 280 9 36 chrX 103346770 103346881 -63303415 + CT-rich Low_complexity Low_complexity 4 111 0 1 1373 227 267 38 0 chrX 103346890 103346976 -63303320 - B1F SINE Alu -26 94 3 1 1373 278 248 44 106 chrX 103347114 103347132 -63303164 + MT2B2 LTR ERVL 152 162 -422 1 1373 598 225 54 0 chrX 103347132 103347261 -63303035 + B1F SINE Alu 3 138 -11 1 1373 317 235 62 0 chrX 103348203 103348284 -63302012 + RSINE1 SINE B4 45 130 -35 1 1373 1214 101 39 0 chrX 103348396 103348575 -63301721 + B2_Mm1t SINE B2 1 186 -7 1 1373 2573 30 7 3 chrX 103348814 103349120 -63301176 - L1Md_F2 LINE L1 -3 6579 6273 1 1373 325 333 0 30 chrX 103349138 103349271 -63301025 + B4 SINE B4 76 204 -88 1 1373 735 203 0 40 chrX 103349156 103349305 -63300991 + B1_Mur2 SINE Alu 7 149 0 1 1373 1153 200 22 65 chrX 103349538 103349859 -63300437 + RLTR18 LTR ERVK 1 307 -309 1 1373 1137 220 32 136 chrX 103349831 103349930 -63300366 + RLTR18 LTR ERVK 138 201 -311 1 1373 1956 45 8 28 chrX 103349930 103350182 -63300114 - L1_Mus1 LINE L1 -1 6566 6320 1 1373 1137 220 32 136 chrX 103350182 103350493 -63299803 + RLTR18 LTR ERVK 202 505 -7 1 1373 1116 51 211 0 chrX 103350533 103350689 -63299607 - B2_Mm1a SINE B2 -4 189 1 1 1373 709 304 19 38 chrX 103350709 103351019 -63299277 - MTE2a LTR MaLR -95 284 6 1 1373 727 184 48 0 chrX 103351748 103351873 -63298423 + B1_Mur3 SINE Alu 3 133 -16 1 1373 234 232 0 18 chrX 103355308 103355365 -63294931 + RMER15 LTR ERVL 3 58 -517 1 1373 2826 122 91 19 chrX 103355410 103355927 -63294369 + RMER15 LTR ERVL 22 575 0 1 1373 216 205 50 25 chrX 103355927 103356007 -63294289 + A-rich Low_complexity Low_complexity 6 87 0 1 1373 1211 132 5 21 chrX 103356091 103356285 -63294011 + B2_Mm2 SINE B2 1 191 -4 1 1373 12947 22 0 0 chrX 103356300 103358455 -63291841 - L1Md_T LINE L1 -2 6580 4426 1 1373 378 143 0 0 chrX 103359142 103359205 -63291091 + (A)n Simple_repeat Simple_repeat 1 63 0 1 1373 335 308 65 28 chrX 103359215 103359322 -63290974 - PB1D10 SINE Alu -6 111 1 1 1373 234 340 75 0 chrX 103359385 103359491 -63290805 - MamGypLTR1b LTR Gypsy -230 552 439 1 1373 467 318 0 15 chrX 103360167 103360301 -63289995 + B1_Mur1 SINE Alu 2 133 -16 1 1373 269 365 8 25 chrX 103360266 103360384 -63289912 - MER45R DNA Tip100 -1464 117 2 1 1373 837 234 22 0 chrX 103360553 103360737 -63289559 + B3 SINE B2 29 216 0 1 1373 972 24 0 8 chrX 103360834 103360961 -63289335 - B1_Mm SINE Alu -21 126 1 1 1373 460 223 57 8 chrX 103360858 103360980 -63289316 - B4A SINE B4 -98 194 67 1 1373 276 253 24 60 chrX 103360928 103361012 -63289284 + RSINE1 SINE B4 23 103 -62 1 1373 1258 34 7 0 chrX 103361236 103361383 -63288913 + B1_Mus1 SINE Alu 1 148 0 1 1373 24 0 0 0 chrX 103361568 103361592 -63288704 + AT_rich Low_complexity Low_complexity 1 24 0 1 1373 1825 170 63 51 chrX 103361598 103362013 -63288283 + Lx4B LINE L1 6635 7054 -4 1 1373 1915 168 53 8 chrX 103362254 103362609 -63287687 - RLTR14 LTR ERV1 -9 373 3 1 1373 186 43 0 0 chrX 103362633 103362656 -63287640 + (TTCTCC)n Simple_repeat Simple_repeat 3 25 0 1 1373 1196 42 14 0 chrX 103362661 103362804 -63287492 - B1_Mm SINE Alu 0 147 3 1 1373 364 306 9 0 chrX 103363144 103363252 -63287044 - ID_B1 SINE B4 -22 202 94 1 1373 2356 172 70 6 chrX 103363253 103363738 -63286558 + RMER20A LTR ERVK 1 516 0 1 1373 290 237 250 0 chrX 103363739 103363815 -63286481 - ID_B1 SINE B4 -127 97 3 1 1373 377 367 25 49 chrX 103364214 103364581 -63285715 + ORR1E LTR MaLR 1 358 -1 1 1373 872 246 189 3 chrX 103364739 103365057 -63285239 + MTEb LTR MaLR 3 379 0 1 1373 441 283 0 7 chrX 103365662 103365801 -63284495 - B1F1 SINE Alu -2 147 10 1 1373 297 304 19 19 chrX 103365863 103365967 -63284329 + PB1D10 SINE Alu 1 104 -13 1 1373 485 350 14 14 chrX 103366009 103366232 -63284064 + ID_B1 SINE B4 1 223 -1 1 1373 555 283 22 0 chrX 103366405 103366543 -63283753 + ID_B1 SINE B4 84 224 0 1 1373 410 255 10 0 chrX 103366752 103366854 -63283442 - MLT1D LTR MaLR 0 505 403 1 1373 925 279 25 18 chrX 103366885 103367170 -63283126 - B4A SINE B4 -5 287 1 1 1373 26 0 0 0 chrX 103367192 103367218 -63283078 + AT_rich Low_complexity Low_complexity 1 26 0 1 1373 306 125 0 0 chrX 103367425 103367473 -63282823 + (T)n Simple_repeat Simple_repeat 1 48 0 1 1373 1233 48 0 0 chrX 103367473 103367620 -63282676 - B1_Mus2 SINE Alu 0 147 1 1 1373 22 56 0 0 chrX 103367711 103367747 -63282549 + AT_rich Low_complexity Low_complexity 1 36 0 1 1373 725 78 0 0 chrX 103367748 103367851 -63282445 - B2_Mm2 SINE B2 -26 169 67 1 1373 21 0 0 0 chrX 103367858 103367879 -63282417 + AT_rich Low_complexity Low_complexity 1 21 0 1 1373 1198 62 0 0 chrX 103368065 103368211 -63282085 + B1_Mus2 SINE Alu 2 147 0 1 1373 1258 76 16 0 chrX 103368243 103368403 -63281893 + B2_Mm1a SINE B2 1 160 -33 1 1373 243 0 0 0 chrX 103368403 103368430 -63281866 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 1 1373 1258 76 16 0 chrX 103368430 103368454 -63281842 + B2_Mm1a SINE B2 161 187 -6 1 1373 1234 41 0 0 chrX 103368462 103368607 -63281689 + B1_Mus2 SINE Alu 1 145 -2 1 1373 257 262 110 18 chrX 103368680 103368789 -63281507 + L1ME4a LINE L1 5981 6099 -25 1 1373 298 272 0 0 chrX 103368797 103368889 -63281407 + GA-rich Low_complexity Low_complexity 1 92 0 1 1373 1406 110 9 0 chrX 103368963 103369182 -63281114 + Lx LINE L1 6434 6654 0 1 1373 1456 70 16 0 chrX 103369184 103369369 -63280927 + B2_Mm2 SINE B2 2 189 -6 1 1373 940 34 0 0 chrX 103369884 103370002 -63280294 + B1_Mm SINE Alu 24 141 -6 1 1373 210 37 0 0 chrX 103370003 103370030 -63280266 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1 1373 28 0 0 0 chrX 103370426 103370454 -63279842 + AT_rich Low_complexity Low_complexity 1 28 0 1 1373 241 299 77 23 chrX 103371274 103371404 -63278892 - BLACKJACK DNA AcHobo -24 2920 2784 1 1373 1478 53 27 0 chrX 103371410 103371597 -63278699 + B2_Mm1a SINE B2 2 193 0 1 1373 198 0 0 0 chrX 103372960 103372982 -63277314 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 1 1373 964 116 0 0 chrX 103372996 103373142 -63277154 - B2_Mm2 SINE B2 -48 147 2 1 1373 240 261 20 118 chrX 103373164 103373316 -63276980 - BLACKJACK DNA AcHobo -324 2620 2484 1 1373 1294 122 5 16 chrX 103373316 103373507 -63276789 - B2_Mm1a SINE B2 -3 190 2 1 1373 225 254 102 0 chrX 103373572 103373631 -63276665 + BC1_Mm scRNA scRNA 7 71 -81 1 1373 984 154 0 0 chrX 103373663 103373812 -63276484 + B1_Mur3 SINE Alu 1 149 0 1 1373 198 71 0 0 chrX 103373821 103373849 -63276447 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1 1373 242 205 84 0 chrX 103373859 103373942 -63276354 - BLACKJACK DNA AcHobo -549 2395 2306 1 1373 226 380 18 36 chrX 103374583 103374695 -63275601 + MER81 DNA AcHobo 1 110 -4 1 1373 1167 104 0 0 chrX 103374964 103375137 -63275159 + (GA)n Simple_repeat Simple_repeat 2 174 0 1 1373 454 277 92 8 chrX 103375248 103375379 -63274917 + B1F1 SINE Alu 1 142 -7 1 1373 1417 86 16 0 chrX 103375388 103375574 -63274722 - B2_Mm2 SINE B2 -6 189 1 1 1373 280 125 0 0 chrX 103375596 103375636 -63274660 + L1MC4 LINE L1 7352 7391 -651 1 1373 647 186 89 0 chrX 103375686 103375810 -63274486 + B1_Mur1 SINE Alu 15 149 0 1 1373 475 282 0 0 chrX 103375821 103375924 -63274372 + B1F SINE Alu 1 103 -46 1 1373 327 282 13 0 chrX 103376046 103376124 -63274172 + ID4 SINE ID 5 83 0 1 1373 27 0 0 0 chrX 103376243 103376270 -63274026 + AT_rich Low_complexity Low_complexity 1 27 0 1 1373 21 0 0 0 chrX 103376285 103376306 -63273990 + AT_rich Low_complexity Low_complexity 1 21 0 1 1373 1197 48 0 7 chrX 103376348 103376496 -63273800 + B1_Mm SINE Alu 1 147 0 1 1373 430 332 166 0 chrX 103377154 103377383 -63272913 + MLT1F1 LTR MaLR 130 396 -173 1 1373 290 326 20 34 chrX 103377385 103377534 -63272762 + MER31B LTR ERV1 1 147 -319 1 1373 252 203 156 0 chrX 103377540 103377604 -63272692 + RSINE1 SINE B4 57 130 -35 1 1373 342 0 0 0 chrX 103377629 103377667 -63272629 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1373 545 108 0 0 chrX 103377675 103377758 -63272538 - ORR1C2 LTR MaLR -301 83 1 1 1373 26 30 0 0 chrX 103377885 103377918 -63272378 + AT_rich Low_complexity Low_complexity 1 33 0 1 1373 553 317 25 6 chrX 103377918 103378080 -63272216 - RSINE1 SINE B4 0 165 1 1 1373 559 186 37 52 chrX 103378147 103378158 -63272138 - B1_Mur4 SINE Alu -2 148 138 1 1373 198 26 50 25 chrX 103378158 103378198 -63272098 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 1 1373 559 186 37 52 chrX 103378198 103378322 -63271974 - B1_Mur4 SINE Alu -13 137 15 1 1373 437 294 14 14 chrX 103378357 103378502 -63271794 + B1F1 SINE Alu 1 145 -4 1 1373 491 284 9 0 chrX 103378671 103378787 -63271509 + PB1D10 SINE Alu 1 117 0 1 1373 483 231 52 37 chrX 103378969 103379104 -63271192 + B1_Mur4 SINE Alu 14 150 0 1 1373 821 281 102 54 chrX 103379190 103379544 -63270752 - MLT1F LTR MaLR -10 538 168 1 1373 320 176 0 14 chrX 103379565 103379634 -63270662 + GA-rich Low_complexity Low_complexity 1 68 0 1 1373 597 286 52 74 chrX 103379719 103379949 -63270347 - MLT1L LTR MaLR -344 266 42 1 1373 312 137 0 0 chrX 103380215 103380266 -63270030 + (T)n Simple_repeat Simple_repeat 1 51 0 1 1373 1151 68 0 13 chrX 103380266 103380415 -63269881 - B1_Mus2 SINE Alu 0 147 1 1 1373 244 262 50 0 chrX 103380417 103380497 -63269799 + MIRb SINE MIR 172 255 -13 1 1373 396 0 0 0 chrX 103381064 103381108 -63269188 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1373 392 194 50 10 chrX 103381109 103381208 -63269088 - Lx9 LINE L1 -169 7475 7373 1 1373 286 224 128 0 chrX 103381611 103381692 -63268604 - ID4_ SINE ID -58 94 5 1 1373 222 211 18 0 chrX 103382422 103382479 -63267817 + G-rich Low_complexity Low_complexity 4 61 0 1 1373 188 143 0 23 chrX 103385420 103385463 -63264833 + (TATG)n Simple_repeat Simple_repeat 2 43 0 1 1373 478 0 16 16 chrX 103385913 103385976 -63264320 + (TTTC)n Simple_repeat Simple_repeat 2 64 0 1 1373 1031 54 54 0 chrX 103385976 103386106 -63264190 - B1_Mm SINE Alu -10 137 1 1 1373 212 140 0 23 chrX 103386706 103386750 -63263546 + ID4_ SINE ID 41 83 0 1 1373 378 237 131 33 chrX 103387143 103387265 -63263031 - RSINE1 SINE B4 -31 134 1 1 1373 465 219 62 47 chrX 103387571 103387700 -63262596 + B1_Mur2 SINE Alu 1 131 -18 1 1373 332 279 15 83 chrX 103387797 103387930 -63262366 + B1_Mm SINE Alu 1 124 -23 1 1373 1084 90 14 20 chrX 103388320 103388467 -63261829 - B1_Mus1 SINE Alu 0 148 3 1 1373 560 236 48 58 chrX 103388487 103388676 -63261620 - B3A SINE B2 -11 187 1 1 1373 262 324 76 0 chrX 103388744 103388849 -63261447 - PB1D10 SINE Alu -4 113 1 1 1373 302 299 86 0 chrX 103389056 103389173 -63261123 - MER68 LTR ERVL -311 252 126 1 1373 999 218 14 27 chrX 103389209 103389431 -63260865 - ID_B1 SINE B4 -5 219 1 1 1373 1134 76 14 0 chrX 103390218 103390362 -63259934 - B1_Mus2 SINE Alu 0 147 2 1 1373 518 228 49 112 chrX 103390669 103390812 -63259484 - ID_B1 SINE B4 -9 215 82 1 1373 240 273 269 39 chrX 103391612 103391768 -63258528 - B3A SINE B2 -6 192 1 1 1373 894 216 32 0 chrX 103392765 103392950 -63257346 - B3 SINE B2 -24 192 2 1 1373 1130 78 28 0 chrX 103393726 103393867 -63256429 + B1_Mm SINE Alu 2 146 -1 1 1373 995 98 92 60 chrX 103393896 103394080 -63256216 - B2_Mm2 SINE B2 -4 191 2 1 1373 206 244 0 60 chrX 103394088 103394171 -63256125 + T-rich Low_complexity Low_complexity 1 78 0 1 1373 1310 47 0 0 chrX 103394173 103394321 -63255975 - B1_Mus1 SINE Alu 0 148 1 1 1373 929 190 56 0 chrX 103394552 103394731 -63255565 - ORR1D1 LTR MaLR -179 195 7 1 1373 218 237 26 0 chrX 103394814 103394852 -63255444 - ID4_ SINE ID -4 79 41 1 1373 742 179 204 17 chrX 103395224 103395400 -63254896 + URR1A DNA MER1_type 15 223 -3 1 1373 195 42 0 0 chrX 103395724 103395748 -63254548 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 1 1373 346 165 342 18 chrX 103396127 103396238 -63254058 + RSINE1 SINE B4 4 150 -15 1 1373 743 136 112 15 chrX 103396308 103396442 -63253854 + B1_Mus1 SINE Alu 2 148 0 1 1373 33 0 0 0 chrX 103396505 103396538 -63253758 + AT_rich Low_complexity Low_complexity 1 33 0 1 1373 185 167 228 53 chrX 103396710 103396767 -63253529 + MER5A DNA MER1_type 7 73 -116 1 1373 636 211 228 6 chrX 103396769 103396931 -63253365 + B3A SINE B2 1 198 0 1 1373 608 243 66 7 chrX 103396940 103397077 -63253219 + B1_Mur1 SINE Alu 3 147 -2 1 1373 477 295 122 20 chrX 103397161 103397358 -63252938 - MER20 DNA MER1_type 0 219 3 1 1373 813 154 29 14 chrX 103397520 103397658 -63252638 - B1_Mur4 SINE Alu -1 149 10 1 1373 468 273 7 71 chrX 103397658 103397674 -63252622 - ID_B1 SINE B4 -2 222 79 1 1373 268 232 202 0 chrX 103399465 103399564 -63250732 + ID_B1 SINE B4 94 212 -12 1 1373 3095 52 15 15 chrX 103399589 103399978 -63250318 - L1Md_F3 LINE L1 0 6584 6196 1 1373 1254 105 6 11 chrX 103399979 103400153 -63250143 - B2_Mm1t SINE B2 -19 174 2 1 1373 1151 120 120 0 chrX 103400626 103400818 -63249478 - Lx2 LINE L1 0 6997 6783 1 1373 5823 83 80 14 chrX 103400819 103401652 -63248644 + Lx2 LINE L1 6110 6997 0 1 1373 596 226 158 0 chrX 103402266 103402443 -63247853 - MIRc SINE MIR -21 247 43 1 1373 22 35 0 0 chrX 103404254 103404283 -63246013 + AT_rich Low_complexity Low_complexity 1 29 0 1 1373 708 238 18 53 chrX 103404383 103404552 -63245744 - RSINE1 SINE B4 0 165 3 1 1373 571 171 43 91 chrX 103405418 103405605 -63244691 + Lx2B LINE L1 6823 7000 0 1 1373 2365 36 0 25 chrX 103405629 103405912 -63244384 - L1Md_F3 LINE L1 -1 6583 6308 1 1373 415 223 60 43 chrX 103406089 103406206 -63244090 + PB1 SINE Alu 7 125 -2 1 1373 5977 100 40 23 chrX 103406357 103407226 -63243070 + Lx2 LINE L1 6113 6996 -1 1 1373 351 229 71 24 chrX 103407313 103407398 -63242898 + PB1D10 SINE Alu 24 112 -5 1 1373 656 87 38 28 chrX 103407553 103407659 -63242637 - B1_Mur4 SINE Alu -9 141 35 1 1373 233 265 43 14 chrX 103407704 103407773 -63242523 + L1MC4 LINE L1 6734 6804 -981 1 1373 914 62 0 0 chrX 103407773 103407885 -63242411 + L1_Mm LINE L1 4835 4946 -937 1 1373 7833 37 2 0 chrX 103407885 103408771 -63241525 + L1Md_F2 LINE L1 5688 6575 -7 1 1373 218 229 0 67 chrX 103408814 103408889 -63241407 + A-rich Low_complexity Low_complexity 1 70 0 1 1373 6341 49 0 0 chrX 103408889 103409641 -63240655 + L1_Mm LINE L1 4835 5586 -297 1 1373 8770 35 8 1 chrX 103409641 103410628 -63239668 + L1Md_F2 LINE L1 5587 6580 -2 1 1373 296 258 43 0 chrX 103410635 103410728 -63239568 - L1MA8 LINE L1 -177 6114 6018 1 1373 359 261 59 7 chrX 103410709 103410844 -63239452 - L1M3 LINE L1 -1115 5025 4884 1 1373 235 232 29 14 chrX 103410899 103410969 -63239327 + L1MC4 LINE L1 6920 6990 -1052 1 1373 189 0 0 0 chrX 103411775 103411796 -63238500 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 1373 477 0 0 0 chrX 103411821 103411874 -63238422 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 1373 1247 49 0 0 chrX 103411875 103412017 -63238279 - B1_Mus1 SINE Alu -6 142 1 1 1373 1375 63 0 6 chrX 103412089 103412265 -63238031 - L1Md_F2 LINE L1 -12 6570 6396 1 1373 1167 55 13 27 chrX 103412680 103412829 -63237467 + B1_Mm SINE Alu 1 147 0 1 1373 1887 186 40 28 chrX 103412844 103413269 -63237027 + Lx4B LINE L1 6625 7054 -4 1 1373 374 319 22 0 chrX 103413315 103413420 -63236876 - PB1D10 SINE Alu -6 121 4 1 1373 424 271 67 8 chrX 103413826 103413945 -63236351 - ID_B1 SINE B4 -8 216 91 1 1373 334 268 110 7 chrX 103415331 103415485 -63234811 - MER53 DNA hAT -23 170 1 1 1373 996 166 135 5 chrX 103415495 103415695 -63234601 + URR1A DNA MER1_type 1 226 0 1 1374 255 233 43 57 chrX 103416523 103416664 -63233632 + (CCCCG)n Simple_repeat Simple_repeat 5 143 0 1 1374 972 314 105 29 chrX 103416861 103417147 -63233149 - Tigger7 DNA MER2_type -2081 410 92 1 1374 1263 61 0 0 chrX 103417147 103417295 -63233001 - B1_Mus1 SINE Alu 0 148 1 1 1374 972 314 105 29 chrX 103417295 103417363 -63232933 - Tigger7 DNA MER2_type -2400 91 25 1 1374 222 62 0 0 chrX 103417363 103417395 -63232901 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 1 1374 972 314 105 29 chrX 103417395 103417420 -63232876 - Tigger7 DNA MER2_type -2467 24 1 1 1374 203 0 37 0 chrX 103417476 103417503 -63232793 + (CG)n Simple_repeat Simple_repeat 1 28 0 1 1374 465 34 0 0 chrX 103417503 103417561 -63232735 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 1374 303 104 0 0 chrX 103417663 103417711 -63232585 + (TTTTTG)n Simple_repeat Simple_repeat 5 52 0 1 1374 1520 198 112 9 chrX 103417711 103418058 -63232238 + MTD LTR MaLR 13 395 -24 1 1374 21 0 0 0 chrX 103418464 103418485 -63231811 + AT_rich Low_complexity Low_complexity 1 21 0 1 1374 484 307 43 7 chrX 103418763 103418904 -63231392 - B1F SINE Alu 0 149 4 1 1374 620 244 98 16 chrX 103419244 103419427 -63230869 - B3A SINE B2 0 198 1 1 1374 26 0 0 0 chrX 103419685 103419711 -63230585 + AT_rich Low_complexity Low_complexity 1 26 0 1 1374 25 0 0 0 chrX 103420539 103420564 -63229732 + AT_rich Low_complexity Low_complexity 1 25 0 1 1374 2638 140 50 2 chrX 103420876 103421278 -63229018 + MTC LTR MaLR 1 421 0 1 1374 558 256 68 0 chrX 103421674 103421807 -63228489 + B3 SINE B2 70 211 -5 1 1374 701 151 8 70 chrX 103421828 103421956 -63228340 + B1_Mus1 SINE Alu 1 120 -28 1 1374 1109 217 15 5 chrX 103422059 103422258 -63228038 - B3 SINE B2 -15 201 1 1 1374 585 129 0 0 chrX 103422416 103422509 -63227787 + (TTCCC)n Simple_repeat Simple_repeat 3 95 0 1 1374 192 158 0 0 chrX 103422619 103422657 -63227639 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1374 4846 142 75 5 chrX 103422671 103423507 -63226789 + RMER19B LTR ERVK 1 895 -7 1 1374 483 107 0 0 chrX 103423515 103423590 -63226706 + (TG)n Simple_repeat Simple_repeat 1 75 0 1 1374 679 318 32 72 chrX 103423590 103423637 -63226659 - B4 SINE B4 -22 270 229 1 1374 1308 48 0 0 chrX 103423637 103423783 -63226513 + B1_Mus1 SINE Alu 2 147 -1 1 1374 679 318 32 72 chrX 103423783 103424013 -63226283 - B4 SINE B4 -64 228 4 1 1374 803 291 70 52 chrX 103424075 103424180 -63226116 - L1M4 LINE L1 -1037 5103 4998 1 1374 1164 46 7 7 chrX 103424180 103424333 -63225963 - L1Md_F3 LINE L1 0 6584 6432 1 1374 803 278 68 53 chrX 103424333 103424583 -63225713 - L1M4 LINE L1 -1145 5001 4747 1 1374 525 231 46 0 chrX 103424583 103424691 -63225605 - PB1D9 SINE Alu -7 113 1 1 1374 803 278 68 53 chrX 103424691 103424789 -63225507 - L1M4 LINE L1 -1400 4746 4646 1 1374 2051 286 101 23 chrX 103424806 103425576 -63224720 + Lx8 LINE L1 6602 7431 -42 1 1374 1376 251 103 40 chrX 103425601 103426145 -63224151 - L1MC LINE L1 -3386 2760 2183 1 1374 1760 52 75 0 chrX 103426162 103426375 -63223921 - L1Md_F2 LINE L1 -10 6572 6344 1 1374 2382 77 3 3 chrX 103426456 103426756 -63223540 - L1_Mus2 LINE L1 -2 6564 6265 1 1374 10298 101 22 68 chrX 103426763 103429058 -63221238 - L1Md_A LINE L1 0 6582 4383 1 1374 744 212 0 49 chrX 103429064 103429208 -63221088 - B1_Mus1 SINE Alu -11 137 1 1 1374 1931 234 88 20 chrX 103430021 103430518 -63219778 + MT2A LTR ERVL 3 533 0 1 1374 217 0 29 29 chrX 103430910 103430944 -63219352 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1374 1092 44 44 0 chrX 103431567 103431704 -63218592 - L1Md_F2 LINE L1 -11 6571 6429 1 1374 488 248 8 24 chrX 103431894 103432018 -63218278 - B1_Mus1 SINE Alu -25 123 2 1 1374 344 288 186 0 chrX 103432019 103432137 -63218159 - ID_B1 SINE B4 -1 223 84 1 1374 577 158 97 0 chrX 103432574 103432702 -63217594 - B1_Mus2 SINE Alu -7 141 3 1 1374 479 239 18 18 chrX 103432828 103432939 -63217357 - B3 SINE B2 -6 210 100 1 1374 186 71 0 0 chrX 103433259 103433287 -63217009 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1 1374 330 26 0 0 chrX 103433312 103433351 -63216945 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1374 535 161 17 0 chrX 103433351 103433469 -63216827 + GA-rich Low_complexity Low_complexity 2 121 0 1 1374 1211 78 0 11 chrX 103433472 103433654 -63216642 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 1374 802 282 127 66 chrX 103434960 103435133 -63215163 - L1MD2 LINE L1 -124 6235 6036 1 1374 1253 68 0 0 chrX 103435133 103435281 -63215015 - B1_Mus1 SINE Alu 0 148 1 1 1374 802 282 127 66 chrX 103435281 103435604 -63214692 - L1MD2 LINE L1 -324 6035 5709 1 1374 976 243 92 18 chrX 103435637 103436152 -63214144 - L1MD2 LINE L1 -807 5552 5008 1 1374 541 234 0 99 chrX 103436227 103436329 -63213967 - B3 SINE B2 -86 130 42 1 1374 3605 49 14 9 chrX 103436329 103436761 -63213535 - L1Md_F3 LINE L1 0 6584 6151 1 1374 541 234 0 99 chrX 103436761 103436800 -63213496 - B3 SINE B2 -175 41 3 1 1374 330 45 0 0 chrX 103436802 103436846 -63213450 + (TCCC)n Simple_repeat Simple_repeat 3 46 0 1 1374 1064 126 0 6 chrX 103436863 103437038 -63213258 + (TTTC)n Simple_repeat Simple_repeat 2 175 0 1 1374 280 313 42 42 chrX 103437048 103437168 -63213128 - PB1 SINE Alu -7 120 1 1 1374 475 304 76 4 chrX 103437190 103437428 -63212868 - L1MD LINE L1 -2537 3609 3355 1 1374 1130 149 0 26 chrX 103439598 103439791 -63210505 - B2_Mm2 SINE B2 -7 188 1 1 1374 261 323 25 25 chrX 103439916 103440078 -63210218 + L1MC4a LINE L1 7711 7872 -10 1 1374 1305 203 52 35 chrX 103441273 103441620 -63208676 + Lx6 LINE L1 7097 7449 -11 1 1374 1337 243 71 99 chrX 103442684 103443288 -63207008 + Lx7 LINE L1 7108 7694 -2 1 1374 181 216 0 0 chrX 103443547 103443584 -63206712 + L2 LINE L2 626 662 -2757 1 1374 318 87 0 0 chrX 103445625 103445671 -63204625 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 1 1374 710 204 0 33 chrX 103445671 103445817 -63204479 - B1_Mus1 SINE Alu -6 142 1 1 1374 22 35 0 0 chrX 103447030 103447059 -63203237 + AT_rich Low_complexity Low_complexity 1 29 0 1 1374 440 336 8 8 chrX 103447115 103447241 -63203055 + RSINE1 SINE B4 1 126 -39 1 1374 32 26 0 0 chrX 103447259 103447298 -63202998 + AT_rich Low_complexity Low_complexity 1 39 0 1 1374 316 258 16 32 chrX 103449387 103449511 -63200785 + CT-rich Low_complexity Low_complexity 1 122 0 1 1374 30 27 0 0 chrX 103451795 103451832 -63198464 + AT_rich Low_complexity Low_complexity 1 37 0 1 1374 1027 84 89 13 chrX 103451855 103452012 -63198284 - L1_Mus1 LINE L1 0 6567 6399 1 1374 1425 294 77 31 chrX 103454528 103455167 -63195129 + Lx8 LINE L1 6774 7441 -32 1 1374 1111 247 95 37 chrX 103455184 103455728 -63194568 - L1M4c LINE L1 -3386 3151 2574 1 1374 302 130 14 0 chrX 103455901 103455970 -63194326 - Lx LINE L1 -2 6652 6583 1 1374 281 138 34 17 chrX 103455983 103456042 -63194254 - L1Md_F LINE L1 -5886 633 574 1 1374 518 288 6 111 chrX 103456158 103456490 -63193806 - L1VL1 LINE L1 -6104 318 22 1 1374 2007 142 18 48 chrX 103456491 103456883 -63193413 - L1VL4 LINE L1 -5534 768 389 1 1374 767 239 31 11 chrX 103456901 103457254 -63193042 - L1Md_F LINE L1 -5709 910 521 1 1374 254 297 29 10 chrX 103457237 103457339 -63192957 - L1M4c LINE L1 -4648 1985 1882 1 1374 198 0 0 0 chrX 103457339 103457361 -63192935 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1 1374 327 326 52 59 chrX 103457473 103457760 -63192536 - L1M4c LINE L1 -5055 1484 1200 1 1374 260 262 14 58 chrX 103457764 103457833 -63192463 + B1_Mus2 SINE Alu 2 67 -80 1 1374 969 213 17 3 chrX 103457990 103458333 -63191963 - Lx4B LINE L1 -30 6946 6584 1 1374 304 137 0 0 chrX 103458334 103458385 -63191911 + Lx3_Mus LINE L1 5838 5888 -1121 1 1374 620 194 35 17 chrX 103458361 103458534 -63191762 + Lx4A LINE L1 5917 6092 -966 1 1374 5992 70 10 8 chrX 103458837 103459634 -63190662 - L1Md_F2 LINE L1 -1 6581 5783 1 1374 6604 31 8 4 chrX 103459629 103460427 -63189869 - L1Md_F3 LINE L1 -1 6583 5783 1 1374 6356 70 4 8 chrX 103460427 103461547 -63188749 - L1Md_F LINE L1 -4363 1520 399 1 1374 2760 73 5 8 chrX 103461549 103461922 -63188374 - L1Md_F2 LINE L1 -4 6578 6207 1 1374 794 207 6 0 chrX 103462013 103462192 -63188104 + CT-rich Low_complexity Low_complexity 1 180 0 1 1374 1126 82 0 0 chrX 103462192 103462339 -63187957 - B1_Mus1 SINE Alu -1 147 1 1 1374 535 303 52 52 chrX 103462341 103462665 -63187631 - L1MD1 LINE L1 -210 6032 5709 1 1374 871 245 95 15 chrX 103462698 103463195 -63187101 - L1MD1 LINE L1 -807 5552 5023 1 1374 30 0 0 0 chrX 103463197 103463227 -63187069 + AT_rich Low_complexity Low_complexity 1 30 0 1 1374 533 257 19 6 chrX 103463238 103463398 -63186898 - B3 SINE B2 -11 187 24 1 1374 3389 48 0 7 chrX 103463398 103463821 -63186475 - L1Md_F3 LINE L1 -14 6570 6151 1 1374 319 179 0 0 chrX 103463821 103463860 -63186436 - B2_Mm1a SINE B2 -154 41 3 1 1374 435 224 0 0 chrX 103463863 103463970 -63186326 + CT-rich Low_complexity Low_complexity 3 109 0 1 1374 818 172 0 11 chrX 103463990 103464172 -63186124 + CT-rich Low_complexity Low_complexity 1 180 0 1 1374 392 308 76 4 chrX 103464327 103464565 -63185731 - L1MD1 LINE L1 -2537 3609 3355 1 1374 351 305 6 28 chrX 103465624 103465821 -63184475 + L1MC4a LINE L1 7704 7981 -14 1 1374 1135 218 52 35 chrX 103467014 103467361 -63182935 + Lx6 LINE L1 7097 7449 -11 1 1374 1071 247 55 98 chrX 103468469 103469012 -63181284 + Lx7 LINE L1 7176 7695 -1 1 1374 30145 51 32 72 chrX 103469145 103473657 -63176639 - L1Md_F2 LINE L1 0 6582 2315 1 1374 194 0 0 37 chrX 103473657 103473684 -63176612 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 1 1374 30145 70 24 76 chrX 103473684 103475404 -63174892 - L1Md_F2 LINE L1 -3569 2314 631 1 1374 213 375 0 53 chrX 103475678 103475754 -63174542 + PB1D10 SINE Alu 28 99 -18 1 1374 2009 77 0 0 chrX 103475782 103476041 -63174255 + L1_Mus1 LINE L1 6308 6566 -1 1 1374 3810 85 23 0 chrX 103476100 103476615 -63173681 - L1_Mus1 LINE L1 -8 6559 6033 1 1374 28704 93 47 3 chrX 103480452 103485881 -63164415 - L1_Mus1 LINE L1 -520 6047 366 1 1374 6838 117 4 71 chrX 103485881 103486173 -63164123 - L1VL4 LINE L1 -1443 2116 1839 1 1374 7512 43 2 3 chrX 103486173 103487094 -63163202 + L1Md_F2 LINE L1 5651 6570 -12 1 1374 6838 117 4 71 chrX 103487094 103487596 -63162700 - L1VL4 LINE L1 -1721 1838 1413 1 1374 1219 34 0 7 chrX 103487596 103487743 -63162553 - B1_Mus2 SINE Alu 0 147 2 1 1374 6838 130 6 82 chrX 103487743 103488695 -63161601 - L1VL4 LINE L1 -2147 1412 508 1 1374 718 206 6 6 chrX 103488684 103488850 -63161446 - Lx4B LINE L1 -314 6744 6579 1 1374 564 180 271 5 chrX 103488841 103489033 -63161263 + Lx4A LINE L1 5836 6078 -980 1 1374 463 250 34 17 chrX 103490037 103490200 -63160096 - L1MA4 LINE L1 -357 5943 5778 1 1374 762 11 0 0 chrX 103490200 103490287 -63160009 + (TTCC)n Simple_repeat Simple_repeat 4 90 0 1 1374 463 250 34 17 chrX 103490287 103490298 -63159998 - L1MA4 LINE L1 -523 5777 5767 1 1374 626 154 21 14 chrX 103490300 103490445 -63159851 + CT-rich Low_complexity Low_complexity 4 149 0 1 1374 570 254 0 48 chrX 103490485 103490630 -63159666 - B1_Mus1 SINE Alu -10 138 1 1 1374 2111 235 32 17 chrX 103491440 103491963 -63158333 + MT2A LTR ERVL 3 533 0 1 1374 7880 37 6 6 chrX 103492055 103493125 -63157171 - L1Md_F2 LINE L1 -14 6568 5488 1 1374 30644 89 10 4 chrX 103493348 103498535 -63151761 + L1Md_F3 LINE L1 375 5586 -297 1 1374 7813 55 6 0 chrX 103498536 103499514 -63150782 + L1Md_F3 LINE L1 5588 6571 -13 1 1374 3529 86 0 0 chrX 103499514 103500000 -63150296 + L1_Mm LINE L1 5295 5780 -103 1 1374 5720 106 0 6 chrX 103500000 103500798 -63149498 + L1Md_F2 LINE L1 5781 6573 -9 1 1374 6772 70 5 6 chrX 103500873 103501696 -63148600 + L1_Mus1 LINE L1 5746 6567 0 2 1374 570 197 16 32 chrX 103502626 103502752 -63147544 - B1_Mus1 SINE Alu -23 125 2 3 1374 256 330 221 9 chrX 103502753 103502866 -63147430 - ID_B1 SINE B4 -4 220 84 4 1374 671 192 69 0 chrX 103503303 103503433 -63146863 - B1_Mus1 SINE Alu -8 140 2 5 1374 315 274 36 95 chrX 103503433 103503480 -63146816 - MT2B LTR ERVL -442 159 121 6 1374 423 291 9 26 chrX 103503560 103503673 -63146623 - B3 SINE B2 -6 210 100 7 1374 315 0 0 0 chrX 103504106 103504141 -63146155 + (TC)n Simple_repeat Simple_repeat 2 36 0 8 1374 183 42 0 0 chrX 103504141 103504164 -63146132 + (TG)n Simple_repeat Simple_repeat 1 24 0 9 1374 312 94 0 0 chrX 103504164 103504217 -63146079 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 1374 826 282 139 31 chrX 103505508 103505984 -63144312 - L1MD2 LINE L1 -124 6235 5709 1 1374 688 226 135 47 chrX 103506017 103506136 -63144160 - L1MD2 LINE L1 -690 5552 5428 1 1374 1539 71 20 0 chrX 103506136 103506332 -63143964 - L1_Mus1 LINE L1 0 6567 6368 1 1374 913 202 96 75 chrX 103506332 103506399 -63143897 - L1MD2 LINE L1 -815 5427 5340 1 1374 865 52 17 0 chrX 103506399 103506515 -63143781 - L1Md_F2 LINE L1 -13 6569 6452 1 1374 913 200 92 77 chrX 103506515 103506842 -63143454 - L1MD2 LINE L1 -807 5339 5008 1 1374 543 270 202 0 chrX 103506865 103507043 -63143253 - B3 SINE B2 0 216 3 1 1374 722 42 0 11 chrX 103507054 103507149 -63143147 + (TCCC)n Simple_repeat Simple_repeat 1 94 0 1 1374 312 48 0 0 chrX 103507156 103507198 -63143098 + (TCTG)n Simple_repeat Simple_repeat 2 43 0 1 1374 264 403 16 16 chrX 103507233 103507354 -63142942 - PB1 SINE Alu -6 121 1 1 1374 511 278 87 29 chrX 103507354 103507595 -63142701 - L1MD LINE L1 -2537 3609 3355 1 1374 1502 306 63 24 chrX 103511893 103512528 -63137768 + Lx8 LINE L1 6774 7433 -40 1 1374 1073 263 108 33 chrX 103512556 103513067 -63137229 - L1MEf LINE L1 -3393 2989 2441 2 1374 36133 64 0 1 chrX 103513201 103518603 -63131693 - L1Md_T LINE L1 -12 6570 1174 2 1374 8358 37 1 0 chrX 103518600 103519894 -63130402 - L1Md_A LINE L1 0 6582 5288 2 1374 40993 17 3 1 chrX 103519889 103526086 -63124210 - L1Md_T LINE L1 0 6582 413 2 1374 8412 93 5 1 chrX 103526082 103527233 -63123063 - L1Md_F LINE L1 -5399 1120 1 2 1374 357 295 59 20 chrX 103527229 103527381 -63122915 - L1MEf LINE L1 -4619 1859 1702 2 1374 312 325 53 60 chrX 103527510 103527792 -63122504 - L1MEf LINE L1 -5060 1324 1045 2 1374 256 294 19 55 chrX 103527796 103527883 -63122413 + B1_Mus2 SINE Alu 2 87 -33 2 1374 958 218 41 34 chrX 103528004 103528297 -63121999 - Lx4B LINE L1 -17 7041 6655 2 1374 4709 6 0 24 chrX 103528297 103528802 -63121494 - MT2_Mm LTR ERVL 0 493 1 2 1374 958 182 11 32 chrX 103528802 103528881 -63121415 - Lx4B LINE L1 -402 6656 6578 2 1374 627 190 17 8 chrX 103528874 103529075 -63121221 + Lx4A LINE L1 5838 6092 -966 2 1374 260 339 109 25 chrX 103529471 103529710 -63120586 - L1M3e LINE L1 -6766 264 6 2 1374 4127 40 13 2 chrX 103529785 103530259 -63120037 + L1Md_F3 LINE L1 6103 6581 -3 3 1374 522 263 26 13 chrX 103530548 103530702 -63119594 - L1MA4 LINE L1 -357 5943 5788 3 1374 864 123 7 43 chrX 103530719 103530995 -63119301 + CT-rich Low_complexity Low_complexity 1 266 0 3 1374 626 113 0 9 chrX 103530989 103531096 -63119200 + (TTCC)n Simple_repeat Simple_repeat 1 106 0 3 1374 498 46 0 0 chrX 103531106 103531171 -63119125 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 3 1374 1839 235 62 22 chrX 103531906 103532410 -63117886 + MT2A LTR ERVL 3 526 -7 3 1374 204 169 50 17 chrX 103532783 103532843 -63117453 + T-rich Low_complexity Low_complexity 4 65 0 3 1374 245 194 62 31 chrX 103533190 103533254 -63117042 + GA-rich Low_complexity Low_complexity 1 66 0 3 1374 3066 191 66 52 chrX 103533518 103534333 -63115963 + L1Md_F LINE L1 87 913 -5606 3 1374 4572 92 2 3 chrX 103534333 103534923 -63115373 + L1_Mus2 LINE L1 5978 6566 0 3 1374 525 277 209 0 chrX 103535177 103535354 -63114942 - B3 SINE B2 0 216 3 4 1374 414 0 0 0 chrX 103535356 103535402 -63114894 + (TTCC)n Simple_repeat Simple_repeat 1 46 0 4 1374 504 48 0 0 chrX 103535403 103535466 -63114830 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 1374 240 379 21 21 chrX 103535478 103535575 -63114721 - PB1 SINE Alu -7 120 24 4 1374 500 289 84 8 chrX 103535615 103535852 -63114444 - L1MD LINE L1 -2537 3609 3355 4 1374 854 183 0 21 chrX 103537632 103537777 -63112519 + B1_Mus1 SINE Alu 1 142 -6 4 1374 3459 48 5 0 chrX 103537828 103538222 -63112074 + MTA_Mm LTR MaLR 1 396 0 4 1374 8603 75 5 12 chrX 103538222 103539327 -63110969 + MTA_Mm-int LTR MaLR 1 1098 0 4 1374 3516 43 5 0 chrX 103539327 103539721 -63110575 + MTA_Mm LTR MaLR 1 396 0 4 1374 1068 87 65 0 chrX 103540926 103541064 -63109232 - B1_Mus1 SINE Alu 0 148 2 4 1374 306 186 0 14 chrX 103541230 103541301 -63108995 + L1Md_F LINE L1 532 601 -5918 4 1374 5320 149 34 24 chrX 103541302 103543084 -63107212 + L1Md_F LINE L1 98 1680 -4203 4 171 30996 93 52 22 chrX 103543082 103548877 -63101419 + L1_Mus2 LINE L1 591 6565 -1 5 1375 2929 170 42 39 chrX 103548890 103549962 -63100334 - L1Md_F LINE L1 -4339 1544 409 5 1375 3050 179 8 35 chrX 103549983 103550584 -63099712 - L1VL4 LINE L1 -5534 768 184 5 1375 403 310 21 7 chrX 103550582 103550725 -63099571 - L1M2 LINE L1 -4248 2859 2715 5 1375 256 277 14 58 chrX 103551120 103551189 -63099107 + B1_Mus2 SINE Alu 2 67 -80 5 1375 949 271 114 11 chrX 103551306 103551683 -63098613 - Lx2B LINE L1 -3 6997 6582 5 1375 778 157 22 13 chrX 103551694 103551883 -63098413 + Lx4B LINE L1 5850 6092 -966 5 1375 282 333 124 5 chrX 103552270 103552472 -63097824 - L1M2 LINE L1 -6766 264 39 5 1375 456 260 92 14 chrX 103552747 103553022 -63097274 - L1MA6 LINE L1 -211 6089 5779 5 1375 690 107 8 24 chrX 103553032 103553157 -63097139 + (TTCC)n Simple_repeat Simple_repeat 4 126 0 5 1375 214 175 46 31 chrX 103553166 103553231 -63097065 + CT-rich Low_complexity Low_complexity 2 67 0 5 1375 618 244 0 49 chrX 103553246 103553388 -63096908 - B1_Mus1 SINE Alu -13 135 1 6 1375 2140 226 32 30 chrX 103554175 103554290 -63096006 + MT2A LTR ERVL 3 115 -418 6 1375 4848 62 17 9 chrX 103554290 103554871 -63095425 - LTRIS_Mus LTR ERV1 0 587 2 6 1375 2140 226 32 30 chrX 103554871 103555285 -63095011 + MT2A LTR ERVL 116 533 0 6 1375 521 236 24 31 chrX 103556517 103556644 -63093652 - B1_Mus1 SINE Alu -21 127 2 6 1375 298 232 14 55 chrX 103556580 103556653 -63093643 - B4 SINE B4 -142 150 81 6 1375 284 319 41 81 chrX 103556647 103556770 -63093526 - PB1D7 SINE Alu -1 119 2 6 1375 26144 143 48 19 chrX 103557084 103558264 -63092032 + L1_Mus2 LINE L1 432 1654 -4229 6 1375 2792 58 3 0 chrX 103558264 103558609 -63091687 - ORR1A1 LTR MaLR 0 346 1 6 1375 26144 135 25 20 chrX 103558609 103563505 -63086791 + L1_Mus2 LINE L1 1655 6566 0 6 1375 716 169 77 0 chrX 103563674 103563804 -63086492 - B1_Mus1 SINE Alu -7 141 2 6 1375 354 290 40 74 chrX 103563804 103563851 -63086445 - MT2B LTR ERVL -439 162 121 6 1375 586 207 0 26 chrX 103563937 103564051 -63086245 - B3 SINE B2 -6 210 100 7 1375 669 13 0 0 chrX 103564450 103564528 -63085768 + (CAAAC)n Simple_repeat Simple_repeat 2 79 0 7 1375 621 167 0 0 chrX 103564569 103564719 -63085577 + GA-rich Low_complexity Low_complexity 1 150 0 7 1375 310 349 76 0 chrX 103565984 103566116 -63084180 - L1MD2 LINE L1 -77 6282 6141 7 1375 647 295 67 24 chrX 103566171 103566501 -63083795 - L1MD2 LINE L1 -307 6052 5709 7 1375 771 247 90 22 chrX 103566541 103567047 -63083249 - L1MD2 LINE L1 -813 5546 5008 7 1375 552 314 46 15 chrX 103567053 103567250 -63083046 - B3 SINE B2 -11 205 3 7 1375 1154 7 7 0 chrX 103567256 103567391 -63082905 + (TTCCC)n Simple_repeat Simple_repeat 2 137 0 7 1375 255 152 0 0 chrX 103567391 103567437 -63082859 + CT-rich Low_complexity Low_complexity 3 48 0 7 1375 444 37 0 0 chrX 103567437 103567491 -63082805 + (TC)n Simple_repeat Simple_repeat 1 54 0 7 1375 404 289 84 8 chrX 103567647 103567884 -63082412 - L1MD2 LINE L1 -2537 3609 3355 7 1375 941 135 0 106 chrX 103570052 103570259 -63080037 - B2_Mm2 SINE B2 -10 185 1 7 1375 364 357 6 23 chrX 103570375 103570547 -63079749 + L1MC4a LINE L1 7704 7872 -10 7 1375 6231 91 17 14 chrX 103570561 103571496 -63078800 + L1_Mus2 LINE L1 5629 6566 0 8 1375 1205 199 46 34 chrX 103572693 103573042 -63077254 + Lx6 LINE L1 7097 7449 -11 8 1375 1122 244 72 90 chrX 103574102 103574700 -63075596 + Lx7 LINE L1 7108 7694 -2 8 1375 760 176 0 21 chrX 103577031 103577176 -63073120 - B1_Mus1 SINE Alu -6 142 1 8 1375 263 259 127 105 chrX 103578038 103578409 -63071887 + L1MA7 LINE L1 5910 6288 -3 8 1375 450 311 8 8 chrX 103578483 103578606 -63071690 + RSINE1 SINE B4 4 126 -39 8 1375 28 48 0 0 chrX 103578621 103578663 -63071633 + AT_rich Low_complexity Low_complexity 1 42 0 8 1375 405 0 0 0 chrX 103579552 103579597 -63070699 + (TA)n Simple_repeat Simple_repeat 2 46 0 8 1375 6684 69 0 4 chrX 103579673 103580583 -63069713 - L1_Mus1 LINE L1 -1 6566 5674 8 1375 224 137 68 0 chrX 103581724 103581797 -63068499 + CT-rich Low_complexity Low_complexity 4 81 0 8 1375 2163 107 6 3 chrX 103584540 103584860 -63065436 - L1_Mus3 LINE L1 -1 6637 6317 9 1375 12440 53 2 0 chrX 103584868 103587219 -63063077 - L1Md_F2 LINE L1 -13 6569 4214 9 1375 34359 59 1 3 chrX 103587214 103593463 -63056833 - L1Md_T LINE L1 -1 6584 250 9 1375 5076 100 4 4 chrX 103593464 103594346 -63055950 - L1_Mus3 LINE L1 -310 6328 5447 9 1375 6954 80 14 2 chrX 103594361 103595663 -63054633 - L1_Mus1 LINE L1 0 6567 5252 9 1375 1225 102 27 0 chrX 103595672 103595859 -63054437 - L1Md_F2 LINE L1 -8 6574 6383 9 1375 180 0 0 0 chrX 103595866 103595886 -63054410 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 9 1375 21 36 0 0 chrX 103595997 103596025 -63054271 + AT_rich Low_complexity Low_complexity 1 28 0 9 1375 22858 65 1 0 chrX 103596062 103599883 -63050413 - L1Md_F2 LINE L1 -12 6570 2746 9 1375 555 43 0 0 chrX 103599882 103599952 -63050344 - L1Md_Gf LINE L1 -953 4933 4864 9 1375 6029 71 1 0 chrX 103599952 103600778 -63049518 + L1Md_F2 LINE L1 4759 5585 -298 9 1375 7781 56 6 2 chrX 103600779 103601770 -63048526 + L1Md_F2 LINE L1 5587 6581 -1 9 1375 252 86 0 0 chrX 103601777 103601812 -63048484 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 1 1375 26052 62 7 3 chrX 103601812 103605787 -63044509 - L1Md_Gf LINE L1 -1007 4879 794 9 1375 380 176 0 0 chrX 103605787 103605861 -63044435 - L1Md_Gf LINE L1 -5987 632 559 9 1375 5018 156 30 45 chrX 103605861 103607517 -63042779 - L1VL4 LINE L1 -1860 1957 474 1 1375 4529 128 95 45 chrX 103607517 103608380 -63041916 + RMER17A2 LTR ERVK 1 906 0 1 1375 424 251 147 62 chrX 103608380 103608437 -63041859 - L1VL4 LINE L1 -6029 490 430 1 1375 764 290 104 27 chrX 103610371 103610736 -63039560 + Lx8 LINE L1 6774 7166 -307 1 1375 646 286 82 16 chrX 103610877 103611133 -63039163 + Lx8 LINE L1 7169 7441 -32 1 1375 1073 260 93 32 chrX 103611150 103611674 -63038622 - L1MC LINE L1 -3386 2760 2205 1 1375 7274 125 72 15 chrX 103611882 103612265 -63038031 - Lx3C LINE L1 -2 6974 6584 1 1375 3300 33 10 0 chrX 103612265 103612657 -63037639 - MTA_Mm LTR MaLR 0 396 1 1 1375 7274 127 44 10 chrX 103612657 103614213 -63036083 - Lx3C LINE L1 -393 6583 4964 1 1375 2088 211 28 28 chrX 103614778 103615309 -63034987 + MT2A LTR ERVL 3 533 0 1 1375 1169 33 0 7 chrX 103616337 103616488 -63033808 + L1Md_A LINE L1 6433 6582 0 1 1375 546 168 26 34 chrX 103616744 103616861 -63033435 - B1_Mus1 SINE Alu -31 117 2 1 1375 300 354 83 0 chrX 103616882 103616978 -63033318 - ID_B1 SINE B4 -37 187 84 1 1375 697 223 0 0 chrX 103617286 103617425 -63032871 - B1_Mur1 SINE Alu -8 141 3 1 1375 681 194 98 29 chrX 103617823 103618013 -63032283 + B3 SINE B2 1 188 -7 1 1375 1920 160 73 0 chrX 103618133 103618489 -63031807 + RLTR14 LTR ERV1 1 382 0 1 1375 822 246 38 24 chrX 103618781 103618993 -63031303 - B3 SINE B2 -1 215 1 1 1375 674 175 75 0 chrX 103619090 103619210 -63031086 - B1_Mus2 SINE Alu -7 140 12 1 1375 349 281 40 80 chrX 103619117 103619268 -63031028 - MT2B LTR ERVL -336 265 121 1 1375 1121 155 14 46 chrX 103619353 103619570 -63030726 - B3 SINE B2 -6 210 1 1 1375 387 0 0 0 chrX 103620303 103620346 -63029950 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1375 753 12 0 0 chrX 103620346 103620431 -63029865 + (GA)n Simple_repeat Simple_repeat 1 86 0 1 1375 741 291 133 15 chrX 103621752 103622212 -63028084 - L1MD1 LINE L1 -137 6222 5709 1 1375 835 245 85 20 chrX 103622252 103622745 -63027551 - L1MD1 LINE L1 -813 5546 5023 1 1375 469 304 0 0 chrX 103622822 103622947 -63027349 - B3 SINE B2 -89 127 3 1 1375 234 0 0 0 chrX 103622947 103622973 -63027323 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1 1375 1589 27 0 5 chrX 103623011 103623199 -63027097 - B2_Mm1a SINE B2 -5 188 2 1 1375 259 419 19 0 chrX 103623211 103623316 -63026980 - PB1 SINE Alu -20 107 1 1 1375 390 292 94 8 chrX 103623338 103623573 -63026723 - L1MD1 LINE L1 -2537 3609 3355 1 1375 641 275 26 13 chrX 103625190 103625341 -63024955 + B3 SINE B2 5 157 -59 1 1375 1140 140 11 11 chrX 103625568 103625756 -63024540 - B2_Mm2 SINE B2 -7 188 1 1 1375 807 174 14 20 chrX 103626308 103626455 -63023841 + B1_Mus1 SINE Alu 3 148 0 1 1375 312 288 0 12 chrX 103627372 103627453 -63022843 + ID4_ SINE ID 3 82 -1 1 1375 1033 146 0 26 chrX 103629133 103629323 -63020973 - B2_Mm2 SINE B2 -10 185 1 1 1375 1748 108 1 1 chrX 103630552 103630825 -63019471 - Lx3C LINE L1 -1202 5774 5501 1 1375 6563 54 9 1 chrX 103630825 103631641 -63018655 + L1_Mus1 LINE L1 5746 6567 0 1 1375 1223 201 43 31 chrX 103631840 103632189 -63018107 + Lx6 LINE L1 7097 7449 -11 1 1375 953 139 97 0 chrX 103632355 103632520 -63017776 - B2_Mm2 SINE B2 -14 181 1 1 1375 180 111 0 0 chrX 103632919 103632946 -63017350 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1375 653 232 148 10 chrX 103633449 103633645 -63016651 + Lx7 LINE L1 7108 7330 -366 1 1375 307 264 77 49 chrX 103633714 103633897 -63016399 + Lx7 LINE L1 7448 7635 -61 1 1375 6718 41 2 0 chrX 103635058 103635920 -63014376 + L1Md_F2 LINE L1 4723 5586 -297 1 1375 7974 52 3 0 chrX 103635920 103636901 -63013395 + L1Md_F2 LINE L1 5587 6570 -12 1 1375 7148 35 10 10 chrX 103636987 103637885 -63012411 + L1Md_F3 LINE L1 5686 6583 -1 1 1375 739 183 0 21 chrX 103639149 103639294 -63011002 - B1_Mus1 SINE Alu -6 142 1 1 1375 29 78 0 0 chrX 103640470 103640534 -63009762 + AT_rich Low_complexity Low_complexity 1 64 0 1 1375 451 328 8 8 chrX 103640585 103640708 -63009588 + RSINE1 SINE B4 4 126 -39 1 1375 21 71 0 0 chrX 103640723 103640765 -63009531 + AT_rich Low_complexity Low_complexity 1 42 0 1 1375 333 0 0 0 chrX 103641905 103641942 -63008354 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 1375 239 143 0 39 chrX 103642179 103642230 -63008066 + CT-rich Low_complexity Low_complexity 2 50 0 1 1375 523 290 103 7 chrX 103642234 103642380 -63007916 - ID_B1 SINE B4 -64 160 1 1 1375 993 211 33 23 chrX 103642468 103642682 -63007614 + B3 SINE B2 1 216 0 1 1375 229 191 217 14 chrX 103643136 103643205 -63007091 - B1_Mur2 SINE Alu -42 107 25 1 1375 868 158 14 0 chrX 103643499 103643638 -63006658 - B1_Mur4 SINE Alu -7 143 3 1 1375 383 328 49 120 chrX 103643645 103643912 -63006384 - L1MC4a LINE L1 -2053 5829 5582 1 1375 653 146 14 7 chrX 103645037 103645175 -63005121 + Lx9 LINE L1 7503 7641 -3 1 1375 1128 141 89 25 chrX 103645189 103645392 -63004904 + B3 SINE B2 1 216 0 1 1375 629 225 16 1 chrX 103645654 103645785 -63004511 - B3A SINE B2 -60 138 6 1 1375 307 327 138 12 chrX 103645961 103646128 -63004168 - HAL1-3A_ME LINE L1 -387 2471 2284 1 1375 300 27 0 0 chrX 103646212 103646249 -63004047 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1375 1235 258 42 64 chrX 103646253 103646589 -63003707 - Lx8 LINE L1 -196 7277 6955 1 1375 477 0 0 0 chrX 103646589 103646642 -63003654 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1375 1235 258 42 64 chrX 103646642 103646777 -63003519 - Lx8 LINE L1 -519 6954 6816 1 1375 21 0 0 0 chrX 103647310 103647331 -63002965 + AT_rich Low_complexity Low_complexity 1 21 0 1 1375 227 149 54 0 chrX 103649306 103649380 -63000916 + CT-rich Low_complexity Low_complexity 4 81 0 1 1375 1544 194 47 68 chrX 103660485 103660867 -62989429 + ORR1D1 LTR MaLR 1 374 0 1 1375 259 282 0 0 chrX 103661551 103661636 -62988660 + RLTR6-int LTR ERV1 3020 3104 -4674 1 1375 23 0 0 0 chrX 103662261 103662284 -62988012 + GC_rich Low_complexity Low_complexity 1 23 0 1 1375 1193 35 7 20 chrX 103662789 103662937 -62987359 + B1_Mus2 SINE Alu 2 147 0 1 1375 405 58 0 0 chrX 103663694 103663746 -62986550 + (TATG)n Simple_repeat Simple_repeat 4 55 0 1 1375 477 277 50 25 chrX 103663765 103663924 -62986372 - RSINE1 SINE B4 0 165 3 1 1375 452 18 18 0 chrX 103665489 103665546 -62984750 + (TC)n Simple_repeat Simple_repeat 1 58 0 1 1375 811 188 43 0 chrX 103666031 103666169 -62984127 - B1_Mur2 SINE Alu -5 144 1 1 1375 275 282 76 114 chrX 103666169 103666237 -62984059 - MT2B2 LTR ERVL -422 162 102 1 1375 310 299 31 10 chrX 103667002 103667100 -62983196 + Lx8 LINE L1 7154 7253 -220 1 1375 297 212 0 0 chrX 103667113 103667179 -62983117 + RMER15 LTR ERVL 405 470 -105 1 1375 488 260 35 21 chrX 103670355 103670575 -62979721 + CT-rich Low_complexity Low_complexity 1 223 0 1 1375 1096 80 0 0 chrX 103670970 103671121 -62979175 + L1_Mus1 LINE L1 6361 6511 -56 1 1375 931 244 9 50 chrX 103671207 103671427 -62978869 + B3 SINE B2 1 211 -5 1 1375 233 251 22 2 chrX 103672964 103673048 -62977248 + MIRc SINE MIR 1 84 -192 1 1375 334 206 244 0 chrX 103673831 103673962 -62976334 - L1MA6 LINE L1 -6 6294 6132 1 1375 189 0 0 0 chrX 103673964 103673985 -62976311 + (TATAA)n Simple_repeat Simple_repeat 5 25 0 1 1375 2473 53 6 21 chrX 103674015 103674342 -62975954 - L1_Mus1 LINE L1 -1 6566 6245 1 1375 893 283 21 4 chrX 103674434 103674668 -62975628 + B4A SINE B4 3 240 -52 1 1375 264 330 0 11 chrX 103674705 103674794 -62975502 + (CA)n Simple_repeat Simple_repeat 1 88 0 1 1375 850 206 11 23 chrX 103674830 103675004 -62975292 + B2_Mm2 SINE B2 2 173 -22 1 1375 2761 65 22 8 chrX 103675006 103675375 -62974921 - L1_Mus1 LINE L1 0 6567 6194 1 1375 865 148 49 6 chrX 103675376 103675539 -62974757 - B2_Mm2 SINE B2 -23 172 3 1 1375 355 159 91 0 chrX 103675550 103675638 -62974658 - L1_Mus3 LINE L1 0 6638 6543 1 1375 314 169 15 0 chrX 103675732 103675797 -62974499 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 1375 228 338 0 15 chrX 103676386 103676452 -62973844 + ID_B1 SINE B4 79 143 -81 1 1375 274 250 171 0 chrX 103676406 103676482 -62973814 + PB1D10 SINE Alu 17 105 -12 1 1375 24 0 0 0 chrX 103677136 103677160 -62973136 + AT_rich Low_complexity Low_complexity 1 24 0 1 1375 21 0 0 0 chrX 103677369 103677390 -62972906 + AT_rich Low_complexity Low_complexity 1 21 0 1 1376 21 0 0 0 chrX 103679129 103679150 -62971146 + AT_rich Low_complexity Low_complexity 1 21 0 1 1376 396 0 0 0 chrX 103679759 103679803 -62970493 + (CAAG)n Simple_repeat Simple_repeat 1 44 0 1 1376 181 338 56 0 chrX 103680280 103680351 -62969945 + L4 LINE RTE 1089 1163 -866 1 1376 180 0 0 0 chrX 103680765 103680785 -62969511 + (CCCCG)n Simple_repeat Simple_repeat 5 24 0 1 1376 451 318 0 26 chrX 103683715 103683867 -62966429 - B1F1 SINE Alu -1 148 1 1 1376 3769 58 8 12 chrX 103684036 103684528 -62965768 + L1Md_F2 LINE L1 6081 6570 -12 1 1376 44 84 0 0 chrX 103684614 103684721 -62965575 + AT_rich Low_complexity Low_complexity 1 107 0 1 1376 235 305 93 103 chrX 103684792 103684986 -62965310 - ORR1D1 LTR MaLR -3 371 180 1 1376 200 23 182 0 chrX 103685041 103685085 -62965211 + (TGAA)n Simple_repeat Simple_repeat 2 53 0 1 1376 227 406 9 9 chrX 103685195 103685302 -62964994 - MLT2B3 LTR ERVL -443 111 5 1 1376 519 295 66 7 chrX 103685380 103685667 -62964629 - L1MA9 LINE L1 -133 6179 5876 1 1376 1579 197 91 13 chrX 103685688 103686131 -62964165 - L1MA9 LINE L1 -549 5763 5291 1 1376 261 98 0 0 chrX 103686131 103686172 -62964124 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1376 1579 235 106 25 chrX 103686172 103686503 -62963793 - L1MA9 LINE L1 -1022 5290 4930 1 1376 492 99 0 24 chrX 103686672 103686755 -62963541 - B2_Mm2 SINE B2 -8 187 107 1 1376 6781 55 50 5 chrX 103686756 103688049 -62962247 + L1_Mus2 LINE L1 5215 6565 -1 2 1376 766 75 9 9 chrX 103688049 103688156 -62962140 - B2_Mm2 SINE B2 -85 110 4 1 1376 389 197 54 40 chrX 103688174 103688322 -62961974 - L1MA9 LINE L1 -2452 3694 3545 1 1376 1058 242 71 5 chrX 103688321 103688769 -62961527 - L1MC LINE L1 -2880 3266 2789 2 1376 1269 168 170 29 chrX 103688802 103689276 -62961020 + Lx4B LINE L1 6304 6836 -222 2 1376 655 266 80 45 chrX 103689331 103689729 -62960567 - L1MC LINE L1 -3405 2741 2330 2 1376 236 398 0 0 chrX 103689730 103689838 -62960458 + Tigger7 DNA MER2_type 4 111 -2380 2 1376 5572 153 35 12 chrX 103689839 103690825 -62959471 - Lx2B LINE L1 -6 6994 5987 2 1376 22 0 0 0 chrX 103691106 103691128 -62959168 + AT_rich Low_complexity Low_complexity 1 22 0 2 1376 1170 62 0 0 chrX 103691408 103691554 -62958742 - B1_Mus2 SINE Alu -1 146 1 2 1376 362 287 0 25 chrX 103691710 103691828 -62958468 - PB1D10 SINE Alu 0 117 3 2 1376 1188 191 93 111 chrX 103691844 103692244 -62958052 + MT2A LTR ERVL 2 523 -78 2 1376 360 0 0 0 chrX 103692244 103692284 -62958012 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1376 814 269 55 61 chrX 103692284 103692327 -62957969 + MT2A LTR ERVL 524 558 -43 2 1376 1085 283 40 33 chrX 103692494 103693022 -62957274 - Lx9 LINE L1 -173 7471 6943 2 1376 268 214 0 35 chrX 103693025 103693083 -62957213 - MT2A LTR ERVL -380 153 98 2 1376 342 259 103 23 chrX 103693089 103693176 -62957120 - MT2A LTR ERVL -407 126 33 2 1376 1036 276 17 0 chrX 103693178 103693468 -62956828 - Lx9 LINE L1 -595 7049 6755 2 1376 632 199 62 0 chrX 103693490 103693636 -62956660 - L1_Rod LINE L1 -1580 4267 4113 2 1376 343 300 133 0 chrX 103693750 103693870 -62956426 + Lx8 LINE L1 7088 7223 -250 2 1376 227 271 17 0 chrX 103693873 103693932 -62956364 + Lx8 LINE L1 7166 7225 -248 2 1376 29 47 0 0 chrX 103694102 103694145 -62956151 + AT_rich Low_complexity Low_complexity 1 43 0 2 1376 245 29 0 29 chrX 103694171 103694206 -62956090 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 1376 600 307 69 32 chrX 103694221 103694625 -62955671 + L1_Rod LINE L1 1903 2321 -3526 2 1376 1743 247 90 47 chrX 103694620 103695503 -62954793 + L1_Rod LINE L1 3075 4054 -1793 2 1376 1590 75 36 24 chrX 103695515 103695762 -62954534 + L1_Mus1 LINE L1 6168 6417 -150 2 1376 250 240 20 0 chrX 103695762 103695812 -62954484 - RSINE1 SINE B4 -89 76 26 2 1376 863 294 28 35 chrX 103695910 103696337 -62953959 - Lx7 LINE L1 -1497 6199 5776 2 1376 412 301 68 14 chrX 103696466 103696688 -62953608 + L1MC4 LINE L1 7108 7341 -701 2 1376 1573 56 0 0 chrX 103696698 103696896 -62953400 + L1Md_T LINE L1 6385 6582 0 2 1376 22 0 0 0 chrX 103696896 103696918 -62953378 + AT_rich Low_complexity Low_complexity 1 22 0 2 1376 294 317 54 13 chrX 103698020 103698244 -62952052 + L1MC4 LINE L1 7712 7944 -98 2 1376 207 0 0 0 chrX 103698570 103698593 -62951703 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 2 1376 1147 45 0 0 chrX 103699363 103699496 -62950800 + B1_Mm SINE Alu 3 135 -12 2 1376 180 0 0 0 chrX 103699497 103699517 -62950779 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 1376 252 0 0 0 chrX 103699525 103699553 -62950743 + (CAAAC)n Simple_repeat Simple_repeat 3 30 0 2 1376 315 242 25 0 chrX 103699616 103699736 -62950560 + GA-rich Low_complexity Low_complexity 2 124 0 2 1376 202 160 20 20 chrX 103699784 103699835 -62950461 + GA-rich Low_complexity Low_complexity 1 51 0 2 1376 375 192 0 0 chrX 103700334 103700412 -62949884 + (CA)n Simple_repeat Simple_repeat 1 78 0 2 1376 609 250 0 0 chrX 103700418 103700550 -62949746 + B3 SINE B2 2 133 -83 2 1376 21 57 0 0 chrX 103700691 103700726 -62949570 + AT_rich Low_complexity Low_complexity 1 35 0 2 1376 937 165 29 12 chrX 103700726 103700898 -62949398 - B2_Mm2 SINE B2 -20 175 1 2 1376 455 195 0 72 chrX 103701068 103701200 -62949096 - Lx7 LINE L1 -1909 5787 5635 2 1376 290 148 37 0 chrX 103701208 103701262 -62949034 + L1_Mur3 LINE L1 3669 3724 -2156 2 1376 779 264 0 21 chrX 103701578 103701764 -62948532 + B3A SINE B2 3 184 -14 2 1376 713 287 101 46 chrX 103702276 103702821 -62947475 - L1MA8 LINE L1 -226 7025 6451 2 1376 399 274 104 41 chrX 103702889 103703110 -62947186 - L1MA8 LINE L1 -3764 3339 3105 2 1376 364 336 26 26 chrX 103703527 103703830 -62946466 - L1MA8 LINE L1 -4161 2946 2644 2 1376 604 164 23 0 chrX 103703833 103703961 -62946335 + CT-rich Low_complexity Low_complexity 3 133 0 2 1376 361 289 155 0 chrX 103703963 103703983 -62946313 - B4A SINE B4 -47 245 145 2 1376 619 134 232 0 chrX 103703983 103704095 -62946201 - B1_Mur3 SINE Alu -5 144 7 2 1376 7187 127 19 6 chrX 103704148 103705270 -62945026 + Lx4A LINE L1 5920 7055 -3 2 1376 21 57 0 0 chrX 103705271 103705306 -62944990 + AT_rich Low_complexity Low_complexity 1 35 0 2 1376 1065 186 47 42 chrX 103705544 103705757 -62944539 + B3 SINE B2 3 216 0 2 1376 1326 353 49 33 chrX 103705770 103706397 -62943899 - L1MA8 LINE L1 -4975 2055 1428 2 1376 2044 190 85 10 chrX 103706397 103706786 -62943510 + MTC LTR MaLR 1 418 -3 2 1376 1326 353 49 33 chrX 103706786 103707125 -62943171 - L1MA8 LINE L1 -5603 1427 1074 2 1376 2164 159 21 26 chrX 103707174 103707553 -62942743 + ORR1C2 LTR MaLR 1 377 -7 2 1376 1052 178 241 11 chrX 103707553 103707810 -62942486 + ORR1B2 LTR MaLR 1 277 -69 2 1376 2901 46 0 0 chrX 103707837 103708183 -62942113 + ORR1A1 LTR MaLR 1 346 0 2 1376 846 255 45 25 chrX 103708482 103708727 -62941569 + RMER5 LTR ERV1 114 363 -171 2 1376 701 229 14 7 chrX 103709041 103709186 -62941110 + B1_Mur2 SINE Alu 3 148 -1 2 1376 2402 212 79 59 chrX 103709202 103709321 -62940975 + Lx9 LINE L1 4969 5082 -765 2 1376 750 158 279 0 chrX 103709321 103709479 -62940817 + B3 SINE B2 5 206 -10 2 1376 204 40 0 0 chrX 103709484 103709509 -62940787 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 1376 2402 212 79 59 chrX 103709509 103709589 -62940707 + Lx9 LINE L1 5085 5165 -682 2 1376 2169 123 77 0 chrX 103709589 103709929 -62940367 + Lx3B LINE L1 6602 6967 -6 2 1376 2402 231 88 54 chrX 103709929 103710806 -62939490 + Lx9 LINE L1 5166 6103 -1541 2 1376 12229 95 3 65 chrX 103710939 103713278 -62937018 - L1_Mus2 LINE L1 -1 6565 4443 2 1376 1048 75 7 40 chrX 103713278 103713430 -62936866 - B1_Mus1 SINE Alu 0 148 2 2 1376 12229 106 2 88 chrX 103713430 103714068 -62936228 - L1_Mus2 LINE L1 -1441 4442 3804 2 1376 1124 41 7 20 chrX 103714068 103714218 -62936078 + RLTR10-int LTR ERVK 61 208 -1779 2 1376 274 200 38 95 chrX 103714247 103714352 -62935944 + RLTR10 LTR ERVK 292 390 0 2 1376 3571 55 70 34 chrX 103714352 103714949 -62935347 + RLTR10-int LTR ERVK 302 992 -995 2 1376 4952 25 2 3 chrX 103715216 103715824 -62934472 + RLTR10-int LTR ERVK 1380 1986 -1 2 1376 2706 59 2 144 chrX 103715824 103716276 -62934020 + RLTR10 LTR ERVK 1 388 -2 2 1376 8737 116 74 2 chrX 103716287 103719003 -62931293 - L1VL2 LINE L1 -2128 3758 562 2 1376 656 226 28 8 chrX 103719002 103719204 -62931092 - Lx6 LINE L1 -636 6824 6630 2 1376 250 260 72 51 chrX 103719202 103719340 -62930956 - Lx6 LINE L1 -1350 6110 5970 2 1376 2444 68 0 0 chrX 103720816 103721125 -62929171 + L1_Mus2 LINE L1 6257 6565 -1 2 1376 1929 178 87 11 chrX 103721152 103721532 -62928764 - MTD LTR MaLR -8 411 3 2 1376 696 187 16 0 chrX 103721533 103721656 -62928640 + RSINE1 SINE B4 13 137 -28 2 1376 32632 118 59 15 chrX 103721896 103723518 -62926778 + Lx3_Mus LINE L1 12 2128 -3758 2 1376 1241 35 0 0 chrX 103723518 103723663 -62926633 - B1_Mm SINE Alu -1 146 2 2 1376 32632 85 8 14 chrX 103723663 103724509 -62925787 + Lx3_Mus LINE L1 2129 2963 -2923 2 1376 4019 47 12 16 chrX 103724509 103725024 -62925272 + L1Md_F2 LINE L1 6058 6570 -12 2 1376 32632 83 20 9 chrX 103725024 103728995 -62921301 + Lx3_Mus LINE L1 2964 6986 -23 2 1376 1772 75 12 16 chrX 103728995 103729251 -62921045 + L1_Mus2 LINE L1 6310 6564 -2 2 1376 22 35 0 0 chrX 103729265 103729294 -62921002 + AT_rich Low_complexity Low_complexity 1 29 0 2 1376 2016 264 48 10 chrX 103729323 103730240 -62920056 + Lx6 LINE L1 6418 7388 -72 2 1376 423 0 0 0 chrX 103730240 103730287 -62920009 + (GA)n Simple_repeat Simple_repeat 1 47 0 2 1376 2016 242 80 13 chrX 103730287 103730336 -62919960 + Lx6 LINE L1 7389 7454 -6 2 1376 241 209 44 44 chrX 103730327 103730417 -62919879 + L1_Rod LINE L1 5746 5835 -12 2 1376 207 167 0 0 chrX 103730457 103730499 -62919797 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 1376 4425 176 48 75 chrX 103730604 103731531 -62918765 + RMER19B LTR ERVK 1 902 0 2 1376 23594 156 24 26 chrX 103732221 103738290 -62912006 + L1_Mus4 LINE L1 595 6636 0 2 1376 319 289 144 0 chrX 103739104 103739208 -62911088 + B1F SINE Alu 24 142 -7 2 1376 279 289 79 0 chrX 103739364 103739478 -62910818 - L1MA5 LINE L1 -361 5939 5817 2 1376 336 111 0 0 chrX 103739523 103739577 -62910719 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1376 924 59 0 0 chrX 103739579 103739698 -62910598 + (GA)n Simple_repeat Simple_repeat 2 120 0 2 1376 344 250 59 0 chrX 103739698 103739766 -62910530 - RSINE1 SINE B4 -44 121 50 2 1376 429 209 90 41 chrX 103739773 103739852 -62910444 + L1M2 LINE L1 4575 4656 -1487 2 1376 189 74 0 0 chrX 103739852 103739879 -62910417 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 1376 429 209 90 41 chrX 103739879 103739944 -62910352 + L1M2 LINE L1 4657 4726 -1417 2 1376 235 333 88 12 chrX 103739940 103740110 -62910186 - L1_Mur3 LINE L1 -3845 2035 1853 2 1376 200 59 29 0 chrX 103740135 103740169 -62910127 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1376 974 247 43 54 chrX 103740372 103740773 -62909523 - BGLII_B LTR ERVK -5 436 63 2 1376 925 242 45 23 chrX 103740795 103741104 -62909192 - L1_Rod LINE L1 -3982 1865 1550 2 1376 266 200 18 0 chrX 103741136 103741191 -62909105 + B3 SINE B2 1 56 -160 2 1376 3685 40 100 2 chrX 103741183 103741681 -62908615 - LTRIS2 LTR ERV1 -17 547 1 2 1376 279 303 91 7 chrX 103741746 103741889 -62908407 - L1_Rod LINE L1 -4435 1412 1258 2 1376 228 67 0 0 chrX 103741891 103741921 -62908375 + (TC)n Simple_repeat Simple_repeat 2 31 0 2 1376 570 314 6 30 chrX 103741935 103742099 -62908197 - RSINE1 SINE B4 -2 163 4 2 1376 813 287 93 118 chrX 103742413 103742974 -62907322 - ERVL-B4-int LTR ERVL -1950 3764 3218 2 1376 2286 280 47 12 chrX 103742957 103743793 -62906503 - ERVL-B4-int LTR ERVL -2603 3064 2202 2 1376 282 300 91 8 chrX 103743892 103744013 -62906283 - ERVL-B4-int LTR ERVL -3687 1980 1850 2 1376 252 186 0 0 chrX 103744260 103744303 -62905993 - Lx5 LINE L1 -344 6706 6664 2 1376 505 162 88 0 chrX 103744282 103744410 -62905886 - Lx4B LINE L1 -90 6968 6738 2 1376 31606 86 2 9 chrX 103744416 103748915 -62901381 + L1Md_F2 LINE L1 773 5233 -650 2 1376 576 0 0 0 chrX 103748915 103748979 -62901317 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 1376 31606 80 3 9 chrX 103748979 103749323 -62900973 + L1Md_F2 LINE L1 5234 5584 -299 2 1376 7681 57 4 5 chrX 103749323 103750310 -62899986 + L1Md_F2 LINE L1 5587 6572 -10 2 1376 28 29 0 0 chrX 103750327 103750362 -62899934 + AT_rich Low_complexity Low_complexity 1 35 0 2 1376 528 16 0 0 chrX 103750447 103750508 -62899788 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 2 1376 29 0 0 0 chrX 103750803 103750832 -62899464 + AT_rich Low_complexity Low_complexity 1 29 0 2 1376 738 282 90 8 chrX 103751131 103751549 -62898747 - L1MA4 LINE L1 -1541 5932 5502 2 1376 367 272 87 26 chrX 103751752 103752016 -62898280 + L1M3d LINE L1 970 1249 -4642 2 1376 1031 290 76 9 chrX 103752103 103752552 -62897744 - L1MA4 LINE L1 -891 5252 4774 2 1376 3821 110 30 0 chrX 103752626 103753191 -62897105 + L1_Mm LINE L1 5198 5779 -104 2 1376 2324 81 14 57 chrX 103753188 103753537 -62896759 + L1_Mus2 LINE L1 6221 6555 -11 3 1376 6370 79 7 5 chrX 103753537 103754393 -62895903 + L1_Mus3 LINE L1 5778 6635 -3 3 1376 578 280 4 17 chrX 103754431 103754667 -62895629 - L1MA4 LINE L1 -1512 4628 4396 2 1376 641 254 19 161 chrX 103754671 103754882 -62895414 - B3A SINE B2 -8 187 7 3 1376 453 19 0 0 chrX 103754992 103755046 -62895250 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 3 1376 662 305 0 0 chrX 103755048 103755202 -62895094 - RSINE1 SINE B4 -11 154 1 3 1376 21 0 0 0 chrX 103755237 103755258 -62895038 + AT_rich Low_complexity Low_complexity 1 21 0 3 1376 257 180 20 0 chrX 103755266 103755316 -62894980 + L1VL4 LINE L1 236 286 -6016 3 1376 2054 148 16 57 chrX 103755331 103755719 -62894577 + L1VL4 LINE L1 398 769 -5533 3 1376 746 180 0 85 chrX 103755720 103755884 -62894412 + L1Md_A LINE L1 188 337 -6282 3 1376 35668 42 4 1 chrX 103755877 103760791 -62889505 + L1Md_A LINE L1 563 5589 -297 3 1376 8193 41 0 4 chrX 103760791 103761790 -62888506 + L1Md_A LINE L1 5590 6584 -1 3 1376 13300 95 24 4 chrX 103761790 103763305 -62886991 + L1VL4 LINE L1 756 2287 -1272 3 1376 418 46 31 0 chrX 103763305 103763370 -62886926 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 3 1376 13300 95 24 4 chrX 103763370 103763991 -62886305 + L1VL4 LINE L1 2288 2933 -626 3 1376 285 222 0 85 chrX 103764212 103764330 -62885966 - Lx9 LINE L1 -543 7101 6994 3 1376 714 285 20 16 chrX 103764331 103764524 -62885772 + ORR1D1 LTR MaLR 1 176 -191 3 1376 210 105 0 0 chrX 103764643 103764681 -62885615 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3 1376 794 210 53 23 chrX 103764704 103764875 -62885421 + ORR1D1 LTR MaLR 199 374 0 3 1376 900 266 35 25 chrX 103764882 103765164 -62885132 - Lx9 LINE L1 -659 6985 6701 3 1376 1790 207 81 81 chrX 103765166 103765750 -62884546 + RLTR31A_Mm LTR ERVK 1 584 0 3 1376 1224 229 51 32 chrX 103765777 103765969 -62884327 + L1_Rod LINE L1 4618 4812 -1035 3 1376 351 0 0 0 chrX 103765969 103766008 -62884288 + (CAA)n Simple_repeat Simple_repeat 1 39 0 3 1376 1224 229 51 32 chrX 103766008 103766185 -62884111 + L1_Rod LINE L1 4813 4993 -854 3 1376 4296 165 115 6 chrX 103766199 103766244 -62884052 + Lx9 LINE L1 6698 6739 -905 3 1376 5303 70 6 3 chrX 103766244 103766936 -62883360 - L1_Mus1 LINE L1 0 6567 5874 3 1376 4296 165 115 6 chrX 103766936 103767743 -62882553 + Lx9 LINE L1 6740 7643 -1 3 1376 24 32 0 0 chrX 103767941 103767972 -62882324 + AT_rich Low_complexity Low_complexity 1 31 0 3 1376 1277 101 16 0 chrX 103768134 103768323 -62881973 + B2_Mm2 SINE B2 1 192 -3 3 1376 739 253 205 60 chrX 103768623 103769106 -62881190 - Lx7 LINE L1 -3 7693 7141 3 1376 1517 233 42 58 chrX 103770023 103770455 -62879841 + Lx6 LINE L1 7009 7433 -27 3 1376 417 39 0 0 chrX 103770562 103770613 -62879683 + (TC)n Simple_repeat Simple_repeat 1 51 0 3 1376 212 331 432 7 chrX 103770793 103770934 -62879362 + MIR SINE MIR 18 218 -44 3 1376 369 0 0 0 chrX 103770960 103771001 -62879295 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1376 284 93 0 44 chrX 103771408 103771453 -62878843 - U2 snRNA snRNA -145 43 1 3 1376 201 358 54 18 chrX 103771481 103771592 -62878704 - MIRc SINE MIR -34 234 120 3 1376 21 82 0 0 chrX 103773009 103773058 -62877238 + AT_rich Low_complexity Low_complexity 1 49 0 3 1376 499 219 93 12 chrX 103774325 103774487 -62875809 - Lx8 LINE L1 -3 7470 7296 3 1376 303 257 0 0 chrX 103776105 103776179 -62874117 - L1MA9 LINE L1 -58 6254 6181 3 1376 413 297 0 0 chrX 103776180 103776291 -62874005 + PB1D10 SINE Alu 1 111 -6 3 1376 408 20 0 0 chrX 103779292 103779341 -62870955 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1376 874 274 107 15 chrX 103779358 103779621 -62870675 - B4A SINE B4 -4 288 2 3 1376 1252 116 0 89 chrX 103779723 103779960 -62870336 - Lx3C LINE L1 -2 6974 6759 3 1376 363 44 0 0 chrX 103780738 103780783 -62869513 + (ATGTG)n Simple_repeat Simple_repeat 2 46 0 3 1376 390 349 40 23 chrX 103781218 103781394 -62868902 + MIR3 SINE MIR 28 206 -2 3 1376 29 28 0 0 chrX 103782102 103782138 -62868158 + AT_rich Low_complexity Low_complexity 1 36 0 3 1376 591 261 50 0 chrX 103782540 103782720 -62867576 - L1MB1 LINE L1 -199 5969 5781 3 1376 23 0 0 0 chrX 103782754 103782777 -62867519 + AT_rich Low_complexity Low_complexity 1 23 0 3 1376 875 177 12 25 chrX 103782819 103782981 -62867315 - U1 snRNA snRNA -5 160 1 3 1376 290 309 35 43 chrX 103783069 103783184 -62867112 + MIRc SINE MIR 7 120 -148 3 1376 225 163 0 0 chrX 103783243 103783292 -62867004 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1376 285 267 27 88 chrX 103783657 103783805 -62866491 + Lx6 LINE L1 7269 7407 -53 3 1376 2153 238 10 56 chrX 103783855 103784358 -62865938 + Lx5 LINE L1 6558 7037 -13 3 1376 287 146 0 18 chrX 103784358 103784414 -62865882 + (ATG)n Simple_repeat Simple_repeat 2 56 0 3 1376 181 30 91 0 chrX 103785469 103785502 -62864794 + (GAGAA)n Simple_repeat Simple_repeat 4 39 0 3 1376 1972 247 52 12 chrX 103785847 103786331 -62863965 + Lx7 LINE L1 6755 7257 -439 3 1376 2543 200 66 27 chrX 103786772 103787285 -62863011 + Lx6 LINE L1 6912 7444 -16 3 1376 1217 54 0 0 chrX 103787773 103787921 -62862375 - B1_Mus1 SINE Alu 0 148 1 3 1376 486 290 58 0 chrX 103788401 103788539 -62861757 + B1F SINE Alu 3 148 -1 3 1376 381 75 0 0 chrX 103788739 103788792 -62861504 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 3 1376 1386 81 10 0 chrX 103788898 103789095 -62861201 + L1_Mus2 LINE L1 6368 6566 0 3 1376 807 126 0 0 chrX 103789111 103789238 -62861058 + (GAAA)n Simple_repeat Simple_repeat 3 129 0 3 1376 336 207 45 3 chrX 103789724 103789828 -62860468 + PB1D9 SINE Alu 1 108 -12 3 1376 483 18 0 0 chrX 103789828 103789884 -62860412 + (CAAG)n Simple_repeat Simple_repeat 3 58 0 3 1376 324 54 30 71 chrX 103790077 103790176 -62860120 + T-rich Low_complexity Low_complexity 6 100 0 3 1376 435 239 35 36 chrX 103790176 103790288 -62860008 - PB1D10 SINE Alu 0 150 27 3 1376 249 163 0 0 chrX 103792581 103792630 -62857666 + (TGG)n Simple_repeat Simple_repeat 3 51 0 3 1376 229 125 0 94 chrX 103793148 103793162 -62857134 + T-rich Low_complexity Low_complexity 35 48 0 3 1376 1115 95 0 0 chrX 103793162 103793310 -62856986 - B1_Mus1 SINE Alu 0 148 1 3 1376 229 125 0 94 chrX 103793310 103793348 -62856948 + T-rich Low_complexity Low_complexity 2 34 0 3 1376 468 0 0 0 chrX 103793348 103793400 -62856896 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1376 185 114 68 0 chrX 103793437 103793481 -62856815 + A-rich Low_complexity Low_complexity 2 48 0 3 1376 270 149 26 39 chrX 103794373 103794450 -62855846 + (TA)n Simple_repeat Simple_repeat 2 77 0 3 1376 211 357 72 72 chrX 103794859 103795040 -62855256 - MIR SINE MIR -44 224 44 3 1376 935 102 7 0 chrX 103795510 103795647 -62854649 - B1_Mus2 SINE Alu -1 146 9 3 1376 386 230 0 103 chrX 103795543 103795669 -62854627 - MT2B LTR ERVL -337 264 152 3 1376 3541 2 0 0 chrX 103795722 103796117 -62854179 - L1Md_A LINE L1 0 6582 6188 3 1376 343 262 0 24 chrX 103796863 103796945 -62853351 + ID4_ SINE ID 4 83 0 3 1376 315 0 0 0 chrX 103799445 103799480 -62850816 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1376 1601 37 0 16 chrX 103799932 103800126 -62850170 + B2_Mm1t SINE B2 1 191 -2 3 1376 1735 230 114 82 chrX 103800902 103801659 -62848637 - Lx7 LINE L1 0 7696 6916 3 1376 508 300 93 81 chrX 103801675 103801998 -62848298 + ORR1E LTR MaLR 28 354 -5 3 1376 382 316 46 40 chrX 103802408 103802583 -62847713 - MER3 DNA MER1_type 0 209 34 3 1376 335 265 58 58 chrX 103803041 103803145 -62847151 + ID_B1 SINE B4 119 222 -2 3 1376 232 217 49 16 chrX 103803581 103803642 -62846654 + MIRc SINE MIR 170 232 -36 3 1376 189 132 0 0 chrX 103804103 103804141 -62846155 + (TTTTTG)n Simple_repeat Simple_repeat 2 39 0 3 1376 219 391 68 0 chrX 103804215 103804348 -62845948 + MIR SINE MIR 1 142 -120 3 1376 982 104 14 14 chrX 103805123 103805269 -62845027 - B1_Mus1 SINE Alu -2 146 1 3 1376 835 209 368 18 chrX 103806215 103806441 -62843855 - Lx4B LINE L1 0 7058 6750 3 1376 189 0 0 0 chrX 103806441 103806462 -62843834 + (GGGTG)n Simple_repeat Simple_repeat 1 21 0 3 1376 835 254 31 4 chrX 103806462 103806652 -62843644 - Lx4B LINE L1 -309 6749 6559 3 1376 210 204 20 0 chrX 103808353 103808402 -62841894 + (TAA)n Simple_repeat Simple_repeat 3 52 0 3 1376 1995 178 19 68 chrX 103808402 103808829 -62841467 - Lx7 LINE L1 -337 7359 6954 3 21 3152 95 32 24 chrX 103808826 103809332 -62840964 + Lx3B LINE L1 5727 6236 -737 3 1377 1158 153 63 5 chrX 103809332 103809555 -62840741 + Lx3B LINE L1 6738 6973 -3 3 1377 24 53 0 0 chrX 103809563 103809601 -62840695 + AT_rich Low_complexity Low_complexity 1 38 0 3 1377 545 179 0 36 chrX 103809636 103809746 -62840550 - Lx5 LINE L1 -168 6882 6777 3 1377 1390 194 18 11 chrX 103809748 103810030 -62840266 + Lx6 LINE L1 7173 7456 -4 3 1377 371 163 57 0 chrX 103810133 103810256 -62840040 + (TA)n Simple_repeat Simple_repeat 1 130 0 3 1377 22 56 0 0 chrX 103810736 103810772 -62839524 + AT_rich Low_complexity Low_complexity 1 36 0 3 1377 225 224 0 108 chrX 103810857 103810922 -62839374 + RLTRETN_Mm LTR ERVK 46 103 -219 3 1377 40 37 0 0 chrX 103811333 103811387 -62838909 + AT_rich Low_complexity Low_complexity 1 54 0 3 1377 1426 68 10 10 chrX 103811435 103811627 -62838669 - B2_Mm2 SINE B2 -2 193 2 3 1377 658 236 93 0 chrX 103811668 103811808 -62838488 - RSINE1 SINE B4 -2 163 11 3 1377 393 250 61 73 chrX 103812647 103812811 -62837485 - L1MC1 LINE L1 -312 6021 5860 3 1377 203 242 0 16 chrX 103812868 103812931 -62837365 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 1377 661 307 70 12 chrX 103812952 103813209 -62837087 - B4A SINE B4 -19 273 2 3 1377 311 269 90 23 chrX 103813741 103813874 -62836422 - L1M5 LINE L1 -346 5778 5637 3 1377 3249 41 3 0 chrX 103814587 103814978 -62835318 + L1Md_F2 LINE L1 5195 5586 -297 3 1377 8167 42 2 0 chrX 103814978 103815960 -62834336 + L1Md_F2 LINE L1 5587 6570 -12 3 1377 261 0 0 0 chrX 103816047 103816076 -62834220 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1377 323 262 23 31 chrX 103817862 103817992 -62832304 + Tigger15a DNA TcMar 508 636 -79 3 1377 683 54 11 0 chrX 103818235 103818327 -62831969 + (TG)n Simple_repeat Simple_repeat 2 94 0 3 1377 1945 211 34 15 chrX 103818431 103818839 -62831457 - MTD LTR MaLR 0 419 4 4 1377 940 283 268 12 chrX 103819713 103820210 -62830086 - Lx8 LINE L1 -218 7255 6632 4 1377 795 254 66 0 chrX 103820225 103820422 -62829874 + B3 SINE B2 1 210 -6 4 1377 29 28 0 0 chrX 103820428 103820464 -62829832 + AT_rich Low_complexity Low_complexity 1 36 0 4 1377 1074 109 0 0 chrX 103820464 103820611 -62829685 - B1_Mus1 SINE Alu -1 147 1 4 1377 498 238 182 0 chrX 103820805 103820931 -62829365 - B1_Mur2 SINE Alu 0 149 1 4 1377 417 97 0 0 chrX 103820946 103821018 -62829278 + (T)n Simple_repeat Simple_repeat 1 72 0 4 1377 233 314 0 0 chrX 103821023 103821074 -62829222 - PB1D10 SINE Alu -43 74 24 4 1377 410 348 48 19 chrX 103822039 103822247 -62828049 + MIR SINE MIR 48 261 -1 4 1377 456 37 0 0 chrX 103822421 103822475 -62827821 + L1Md_F3 LINE L1 6399 6452 -132 4 1377 279 0 0 0 chrX 103822490 103822521 -62827775 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1377 853 200 45 0 chrX 103823297 103823452 -62826844 + B3 SINE B2 1 162 -54 4 1377 441 221 67 0 chrX 103823454 103823558 -62826738 - MTD LTR MaLR -217 202 92 4 1377 573 15 0 0 chrX 103823645 103823711 -62826585 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 1377 1308 235 80 35 chrX 103823859 103824171 -62826125 - MTD LTR MaLR -2 417 92 4 1377 1069 260 123 139 chrX 103824171 103824798 -62825498 + RLTR18B LTR ERVK 2 616 0 4 1377 519 162 111 0 chrX 103824798 103824890 -62825406 - MTD LTR MaLR -315 104 2 4 1377 276 278 86 76 chrX 103824939 103825044 -62825252 - PB1D10 SINE Alu 0 117 12 4 1377 219 36 0 0 chrX 103825067 103825095 -62825201 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1377 8060 39 1 1 chrX 103825160 103826370 -62823926 - L1Md_T LINE L1 0 6582 5373 4 1377 3929 17 0 0 chrX 103826354 103826813 -62823483 + L1Md_T LINE L1 4940 5398 -485 4 1377 21 0 0 0 chrX 103827223 103827244 -62823052 + AT_rich Low_complexity Low_complexity 1 21 0 4 1377 369 104 39 0 chrX 103827610 103827687 -62822609 + (TG)n Simple_repeat Simple_repeat 2 81 0 4 1377 456 19 0 0 chrX 103829242 103829295 -62821001 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1377 504 223 1 88 chrX 103829588 103829713 -62820583 - PB1D9 SINE Alu -6 114 2 4 1377 22 0 0 0 chrX 103829893 103829915 -62820381 + AT_rich Low_complexity Low_complexity 1 22 0 4 1377 432 0 0 0 chrX 103830707 103830755 -62819541 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1377 330 149 0 0 chrX 103831056 103831103 -62819193 - ORR1C1 LTR MaLR 0 378 332 4 1377 817 82 0 0 chrX 103831102 103831212 -62819084 - B1_Mus1 SINE Alu -38 110 1 4 1377 292 276 94 9 chrX 103831494 103831600 -62818696 + MER3 DNA MER1_type 2 116 -93 4 1377 774 0 0 0 chrX 103831607 103831693 -62818603 + (TTTC)n Simple_repeat Simple_repeat 4 89 0 4 1377 1426 222 128 23 chrX 103831693 103831889 -62818407 + MTD LTR MaLR 19 229 -190 4 1377 2378 93 33 19 chrX 103831889 103832252 -62818044 - RLTR9A LTR ERVK 0 368 1 4 1377 1426 222 128 23 chrX 103832252 103832406 -62817890 + MTD LTR MaLR 230 406 -13 4 1377 2135 261 30 50 chrX 103832413 103833050 -62817246 + MTD-int LTR MaLR 1 624 -634 4 1377 255 177 97 0 chrX 103833052 103833114 -62817182 + MTD-int LTR MaLR 946 1013 -245 4 1377 5575 204 51 31 chrX 103833114 103835411 -62814885 - Lx5 LINE L1 -20 7732 5418 4 1377 388 271 94 23 chrX 103835405 103835741 -62814555 - Lx5 LINE L1 -4274 2575 2283 4 1377 476 167 8 0 chrX 103835809 103835929 -62814367 + GA-rich Low_complexity Low_complexity 2 122 0 4 1377 205 225 28 0 chrX 103836523 103836594 -62813702 + T-rich Low_complexity Low_complexity 2 74 0 4 1377 17844 101 77 65 chrX 103838078 103842398 -62807898 - L1_Mus1 LINE L1 0 6567 2217 4 1377 319 341 0 23 chrX 103842838 103842967 -62807329 - L1M4 LINE L1 -3902 2739 2614 4 1377 295 283 0 108 chrX 103842986 103843097 -62807199 + MTEa LTR MaLR 3 101 -278 4 1377 1366 226 174 37 chrX 103843105 103843570 -62806726 + RCHARR1 DNA MER1_type 35 563 -411 4 1377 31 58 0 0 chrX 103843954 103844006 -62806290 + AT_rich Low_complexity Low_complexity 1 52 0 4 1377 836 171 13 7 chrX 103844083 103844236 -62806060 - Lx9 LINE L1 -172 7472 7319 4 1377 4974 184 18 11 chrX 103844231 103845252 -62805044 - Lx4B LINE L1 -225 6833 5812 4 1377 818 94 0 0 chrX 103845252 103845358 -62804938 - U6 snRNA snRNA -1 106 1 4 1377 245 250 30 40 chrX 103845358 103845378 -62804918 - Lx4B LINE L1 -75 5811 5789 4 1377 5387 117 17 21 chrX 103845365 103846284 -62804012 - L1_Mur2 LINE L1 -683 5194 4279 4 1377 7258 181 30 15 chrX 103846276 103847908 -62802388 - L1_Mur2 LINE L1 -2497 3380 1724 4 1377 240 253 105 0 chrX 103849565 103849660 -62800636 - L1M4 LINE L1 -5993 549 445 4 1377 301 286 104 12 chrX 103849736 103849909 -62800387 - L1M4 LINE L1 -6315 227 39 4 1377 577 192 0 0 chrX 103850559 103850663 -62799633 + B1_Mur3 SINE Alu 46 149 0 4 1377 365 39 0 19 chrX 103850671 103850723 -62799573 + (CCAA)n Simple_repeat Simple_repeat 2 52 0 4 1377 35 0 0 0 chrX 103852729 103852764 -62797532 + AT_rich Low_complexity Low_complexity 1 35 0 4 1377 1220 70 13 0 chrX 103852839 103852997 -62797299 + B2_Mm2 SINE B2 2 161 -34 4 1377 243 0 0 0 chrX 103852997 103853024 -62797272 + (CTAA)n Simple_repeat Simple_repeat 2 28 0 4 1377 4366 78 3 2 chrX 103853034 103853613 -62796683 - L1_Mus2 LINE L1 0 6566 5987 4 1377 314 323 29 80 chrX 103853640 103853778 -62796518 + B1_Mur1 SINE Alu 1 131 -18 4 1377 195 72 23 45 chrX 103853796 103853840 -62796456 + (GGGAGA)n Simple_repeat Simple_repeat 4 46 0 4 1377 418 330 60 55 chrX 103853864 103854047 -62796249 - B3A SINE B2 -14 184 1 4 1377 555 274 0 0 chrX 103854130 103854247 -62796049 - B1_Mur1 SINE Alu -21 128 12 4 1377 256 258 20 8 chrX 103854237 103854324 -62795972 + MLT1A1 LTR MaLR 36 122 -243 4 1377 31 26 0 0 chrX 103854389 103854427 -62795869 + AT_rich Low_complexity Low_complexity 1 38 0 4 1377 4308 223 53 2 chrX 103854537 103855503 -62794793 + Lx9 LINE L1 6306 7320 -324 4 1377 7266 73 6 0 chrX 103855627 103856884 -62793412 + L1_Mus1 LINE L1 5307 6567 0 4 1377 354 45 0 0 chrX 103856912 103856956 -62793340 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1377 498 280 59 8 chrX 103856959 103857078 -62793218 - B3A SINE B2 -38 160 36 4 1377 183 313 39 39 chrX 103857608 103857711 -62792585 + L2c LINE L2 2857 2959 -460 4 1377 260 228 165 0 chrX 103857752 103857831 -62792465 + L2c LINE L2 3258 3349 -38 4 1377 195 285 0 80 chrX 103858211 103858291 -62792005 + MIRb SINE MIR 147 216 -46 4 1377 470 226 44 31 chrX 103858729 103858889 -62791407 - L1_Mur3 LINE L1 -493 5387 5226 4 1377 272 170 0 0 chrX 103858890 103858937 -62791359 - URR1B DNA MER1_type 0 225 179 4 1377 824 272 4 9 chrX 103859098 103859328 -62790968 - L1_Mur3 LINE L1 -651 5229 5001 4 1377 621 213 0 0 chrX 103859497 103859624 -62790672 - RMER1B Other Other -230 836 710 4 1377 653 254 69 16 chrX 103859634 103859822 -62790474 + Lx7 LINE L1 6612 6809 -887 4 1377 296 309 0 23 chrX 103860088 103860174 -62790122 + MLT1C LTR MaLR 84 167 -300 4 1377 578 14 14 0 chrX 103860183 103860254 -62790042 + (GA)n Simple_repeat Simple_repeat 1 72 0 4 1377 459 35 0 0 chrX 103860410 103860467 -62789829 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 4 1377 356 234 28 18 chrX 103860481 103860590 -62789706 - L1MA6 LINE L1 -90 6210 6101 4 1377 327 233 111 29 chrX 103860619 103860827 -62789469 + L1MA4 LINE L1 4263 4487 -1656 4 1377 811 300 44 54 chrX 103860823 103861394 -62788902 + L1MA4 LINE L1 4628 5192 -951 4 1377 256 202 170 47 chrX 103861447 103861503 -62788793 + L1MA4 LINE L1 5306 5358 -942 4 1377 2104 111 35 26 chrX 103861503 103861845 -62788451 + Lx LINE L1 6309 6653 -1 4 1377 256 202 170 47 chrX 103861845 103861959 -62788337 + L1MA4 LINE L1 5359 5497 -803 4 1377 3264 139 14 2 chrX 103861959 103862458 -62787838 + Lx4A LINE L1 6549 7053 -5 4 1377 261 0 0 0 chrX 103862458 103862487 -62787809 + (TAA)n Simple_repeat Simple_repeat 2 30 0 4 1377 959 278 72 16 chrX 103862530 103862976 -62787320 + L1MA4 LINE L1 5477 5947 -353 4 1377 318 295 7 26 chrX 103863493 103863646 -62786650 - L1_Mur3 LINE L1 -1358 4522 4373 4 1377 1721 181 73 8 chrX 103863798 103864155 -62786141 - RLTR14 LTR ERV1 0 382 3 4 1377 433 250 44 62 chrX 103864480 103864706 -62785590 - L1M3 LINE L1 -1996 4144 3923 4 1377 539 276 103 8 chrX 103866161 103866380 -62783916 - MIRb SINE MIR -9 259 6 4 1377 1214 181 4 18 chrX 103866689 103866914 -62783382 - URR1B DNA MER1_type 0 225 4 4 1377 330 0 60 0 chrX 103867288 103867338 -62782958 + (CAA)n Simple_repeat Simple_repeat 2 54 0 4 1377 186 236 254 0 chrX 103867435 103867490 -62782806 - MIR SINE MIR -104 158 90 4 1377 2285 194 2 12 chrX 103867803 103868220 -62782076 - MTC LTR MaLR -8 413 1 4 1377 682 235 34 23 chrX 103868296 103868483 -62781813 + B3A SINE B2 1 187 -8 4 1377 1190 61 0 0 chrX 103868860 103869007 -62781289 + B1_Mus2 SINE Alu 1 147 0 4 1377 226 50 50 0 chrX 103869009 103869049 -62781247 + (GAAA)n Simple_repeat Simple_repeat 2 43 0 4 1377 29 0 0 0 chrX 103869336 103869365 -62780931 + AT_rich Low_complexity Low_complexity 1 29 0 4 1377 507 216 144 24 chrX 103869424 103869552 -62780744 - RSINE1 SINE B4 -23 142 5 4 1377 599 340 33 14 chrX 103871324 103871536 -62778760 - Tigger5 DNA MER2_type -2178 228 13 4 1377 785 250 60 20 chrX 103871673 103871873 -62778423 - B3 SINE B2 0 216 9 4 1377 6148 54 0 0 chrX 103872043 103872842 -62777454 + L1Md_F2 LINE L1 4788 5586 -297 4 1377 8212 44 1 0 chrX 103872842 103873834 -62776462 + L1Md_F2 LINE L1 5587 6579 -3 4 1377 552 278 106 13 chrX 103873846 103874137 -62776159 - L1MA9 LINE L1 -144 6147 5829 4 1377 465 341 0 22 chrX 103874194 103874332 -62775964 - RSINE1 SINE B4 -25 140 6 4 1377 414 157 19 10 chrX 103874380 103874483 -62775813 + CT-rich Low_complexity Low_complexity 6 109 0 4 1377 575 321 26 67 chrX 103874546 103874768 -62775528 - B4A SINE B4 -58 234 9 4 1377 392 274 0 11 chrX 103874841 103874976 -62775320 - L1MA9 LINE L1 -432 5736 5606 4 1377 2103 116 3 59 chrX 103874976 103875316 -62774980 - ORR1A2 LTR MaLR -4 323 3 4 1377 30935 90 15 8 chrX 103875332 103881341 -62768955 - L1Md_F2 LINE L1 0 6582 534 4 1377 455 139 0 0 chrX 103881336 103881408 -62768888 - L1Md_F2 LINE L1 -6338 278 207 4 1377 1967 252 17 32 chrX 103881565 103882287 -62768009 - Lx9 LINE L1 -1727 5917 4740 4 1377 912 241 174 31 chrX 103882294 103882406 -62767890 - RLTR28B LTR ERVL -39 442 327 4 1377 183 42 0 0 chrX 103882406 103882430 -62767866 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1377 912 241 174 31 chrX 103882430 103882702 -62767594 - RLTR28B LTR ERVL -155 326 3 4 1377 1104 217 49 104 chrX 103882705 103883174 -62767122 - Lx9 LINE L1 -1139 4741 4299 4 1377 886 124 36 24 chrX 103883174 103883339 -62766957 - URR1B DNA MER1_type 0 225 59 4 1377 12101 96 15 3 chrX 103883339 103886047 -62764249 - L1VL2 LINE L1 -806 2809 66 4 1377 349 181 301 0 chrX 103886048 103886131 -62764165 - URR1B DNA MER1_type -118 107 1 4 1377 293 280 3 3 chrX 103886131 103886249 -62764047 - Lx9 LINE L1 -1572 4311 4189 4 1377 2034 101 55 7 chrX 103886249 103886342 -62763954 - IAPLTR2b LTR ERVK -2 325 221 4 1377 180 125 0 0 chrX 103886342 103886374 -62763922 + (CAAG)n Simple_repeat Simple_repeat 4 35 0 4 1377 2034 101 55 7 chrX 103886374 103886590 -62763706 - IAPLTR2b LTR ERVK -107 220 1 4 1377 6226 53 19 16 chrX 103886592 103887441 -62762855 - IAPEz-int LTR ERVK -2 6479 5629 4 1377 3056 14 0 0 chrX 103887426 103887784 -62762512 - IAPEz-int LTR ERVK -3405 3076 2719 4 1377 14922 64 88 23 chrX 103887783 103889984 -62760312 - IAPEz-int LTR ERVK -4136 2345 3 4 1377 2034 101 55 7 chrX 103889984 103890077 -62760219 - IAPLTR2b LTR ERVK -2 325 221 5 1377 180 125 0 0 chrX 103890077 103890109 -62760187 + (CAAG)n Simple_repeat Simple_repeat 4 35 0 5 1377 2034 101 55 7 chrX 103890109 103890325 -62759971 - IAPLTR2b LTR ERVK -107 220 1 5 1377 640 243 28 0 chrX 103890327 103890504 -62759792 - Lx9 LINE L1 -1685 4195 4014 4 1377 189 0 0 0 chrX 103890534 103890555 -62759741 + (TTA)n Simple_repeat Simple_repeat 1 21 0 5 1377 7195 80 5 5 chrX 103890555 103892212 -62758084 - L1Md_F2 LINE L1 -23 6559 4903 5 1377 3545 23 136 0 chrX 103892216 103892650 -62757646 + MT2_Mm LTR ERVL 1 493 0 5 1377 427 256 29 23 chrX 103892718 103892874 -62757422 - Lx9 LINE L1 -2092 3788 3631 4 1377 201 74 0 0 chrX 103892874 103892901 -62757395 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 5 1377 427 256 29 23 chrX 103892901 103892916 -62757380 - Lx9 LINE L1 -2250 3630 3616 4 1377 380 319 20 101 chrX 103892937 103893358 -62756938 - L1MEg LINE L1 -5096 1644 1120 5 1377 960 75 81 14 chrX 103893616 103893764 -62756532 - L1_Mus1 LINE L1 0 6567 6410 5 1377 468 0 0 0 chrX 103894154 103894206 -62756090 + (TTTC)n Simple_repeat Simple_repeat 1 52 0 5 1377 953 268 34 54 chrX 103894303 103894599 -62755697 + B4A SINE B4 1 290 -2 5 1377 253 307 33 73 chrX 103894751 103894902 -62755394 + MIR3 SINE MIR 33 177 -31 5 1377 392 233 98 20 chrX 103895052 103895205 -62755091 - L1MA9 LINE L1 -158 6154 5990 5 1377 227 387 83 25 chrX 103895508 103895712 -62754584 + L3 LINE CR1 3438 3653 -836 5 1377 424 86 24 24 chrX 103895977 103896060 -62754236 + (TCTCTG)n Simple_repeat Simple_repeat 2 84 0 5 1377 396 188 12 36 chrX 103896060 103896143 -62754153 - HAL1-3A_ME LINE L1 -824 2034 1954 5 1377 1350 78 0 0 chrX 103896647 103897006 -62753290 + (TCC)n Simple_repeat Simple_repeat 1 359 0 5 1377 221 299 24 72 chrX 103897109 103897192 -62753104 - ID4 SINE ID 0 83 5 5 1377 712 229 99 45 chrX 103897795 103897996 -62752300 + B3 SINE B2 1 212 -4 5 1377 198 209 0 0 chrX 103898015 103898058 -62752238 + (TATG)n Simple_repeat Simple_repeat 4 46 0 5 1377 641 316 28 0 chrX 103898059 103898236 -62752060 - B3A SINE B2 -16 182 1 5 1377 605 49 0 12 chrX 103898576 103898658 -62751638 + (TTCC)n Simple_repeat Simple_repeat 3 83 0 5 1377 234 0 0 0 chrX 103898705 103898731 -62751565 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 5 1377 405 0 0 0 chrX 103898754 103898799 -62751497 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1377 411 21 0 0 chrX 103899109 103899157 -62751139 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1377 1335 156 121 7 chrX 103900740 103901030 -62749266 - Lx9 LINE L1 -9 7635 7313 5 1377 261 315 38 15 chrX 103901405 103901537 -62748759 - L1M3 LINE L1 -2323 3817 3683 5 1377 546 165 9 0 chrX 103901620 103901729 -62748567 - L1_Mur1 LINE L1 -792 5094 4985 5 1377 3041 78 0 28 chrX 103901749 103902182 -62748114 - L1_Mus4 LINE L1 0 6636 6216 5 1377 3131 110 6 6 chrX 103902182 103902658 -62747638 + Lx LINE L1 5875 6350 -304 5 1377 1270 192 24 36 chrX 103902658 103902907 -62747389 + MTC LTR MaLR 168 413 -8 5 1377 2942 194 30 48 chrX 103902912 103903572 -62746724 + MTC-int LTR MaLR 2 649 -609 5 1377 977 173 87 0 chrX 103903565 103903750 -62746546 + MTC LTR MaLR 221 421 0 5 1377 577 216 96 7 chrX 103904058 103904193 -62746103 - B1_Mur2 SINE Alu -1 148 2 5 1377 895 302 78 11 chrX 103905111 103905459 -62744837 + MLT2C2 LTR ERVL 37 407 -57 5 1377 1419 232 70 6 chrX 103905463 103905792 -62744504 - Lx9 LINE L1 -180 7464 7115 5 1377 232 187 93 0 chrX 103905805 103905880 -62744416 + Lx9 LINE L1 7561 7642 -2 5 1377 21 0 0 0 chrX 103905904 103905925 -62744371 + AT_rich Low_complexity Low_complexity 1 21 0 5 1377 222 171 0 0 chrX 103906161 103906202 -62744094 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1377 423 261 0 0 chrX 103906212 103906300 -62743996 - ID_B1 SINE B4 -33 191 104 5 1377 528 249 63 36 chrX 103906786 103907007 -62743289 + ERVL-B4-int LTR ERVL 821 1047 -4667 5 1377 379 317 6 40 chrX 103907137 103907311 -62742985 + ERVL-int LTR ERVL 2451 2618 -3139 5 1377 256 324 26 26 chrX 103907347 103907461 -62742835 + MLT1A1 LTR MaLR 295 408 0 5 1377 459 0 0 0 chrX 103907615 103907666 -62742630 + (TC)n Simple_repeat Simple_repeat 1 51 0 5 1377 405 70 0 0 chrX 103907666 103907722 -62742574 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 1377 643 277 69 67 chrX 103907736 103908241 -62742055 - L1MA8 LINE L1 -355 5936 5397 5 1377 1526 56 0 0 chrX 103908241 103908437 -62741859 - L1Md_F3 LINE L1 -14 6570 6375 5 1377 441 144 8 83 chrX 103908473 103908594 -62741702 - L1MA8 LINE L1 -873 5270 5159 5 1377 779 184 20 26 chrX 103908594 103908745 -62741551 - B1_Mur4 SINE Alu 0 150 1 5 1377 1241 281 87 17 chrX 103908745 103909404 -62740892 - L1MA8 LINE L1 -974 5169 4465 5 1377 552 214 116 33 chrX 103909404 103909525 -62740771 + MTE2b LTR MaLR 1 131 -248 5 1377 833 285 0 11 chrX 103909523 103909704 -62740592 - B3 SINE B2 -35 181 3 5 1377 1732 292 27 50 chrX 103909938 103910612 -62739684 - Lx8 LINE L1 -388 7085 6428 5 1377 435 38 0 0 chrX 103910770 103910823 -62739473 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1377 1716 198 39 0 chrX 103910865 103911223 -62739073 + ORR1D1 LTR MaLR 1 372 -2 5 1377 183 162 0 0 chrX 103911725 103911762 -62738534 + (CAAG)n Simple_repeat Simple_repeat 3 39 0 5 1377 539 249 58 23 chrX 103911997 103912170 -62738126 + B3A SINE B2 2 180 -18 5 1377 204 40 0 0 chrX 103912197 103912222 -62738074 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 1377 25 31 0 0 chrX 103912241 103912273 -62738023 + AT_rich Low_complexity Low_complexity 1 32 0 5 1377 1072 286 65 17 chrX 103913288 103913644 -62736652 + ERVL-B4-int LTR ERVL 3572 3944 -1770 5 1377 621 302 94 46 chrX 103913686 103914078 -62736218 - Lx8 LINE L1 0 7473 7063 5 1377 610 339 75 14 chrX 103914092 103914370 -62735926 + RMER15 LTR ERVL 263 557 -18 5 1377 5451 177 5 40 chrX 103914881 103915040 -62735256 - L1_Mus2 LINE L1 -650 5916 5757 5 1377 2343 69 113 11 chrX 103915040 103915394 -62734902 + RLTR10 LTR ERVK 1 390 0 5 1377 5451 166 4 43 chrX 103915394 103915978 -62734318 - L1_Mus2 LINE L1 -121 5756 5187 5 1377 2721 112 10 2 chrX 103915978 103916381 -62733915 - Lx LINE L1 0 6654 6249 5 1377 5451 166 4 43 chrX 103916381 103916431 -62733865 - L1_Mus2 LINE L1 -691 5186 5150 5 1377 5854 83 0 1 chrX 103916431 103917204 -62733092 - L1_Mus1 LINE L1 0 6567 5796 5 1377 5451 166 4 43 chrX 103917204 103917561 -62732735 - L1_Mus2 LINE L1 -728 5149 4803 5 1377 1765 190 45 5 chrX 103917562 103917958 -62732338 + Lx2B LINE L1 5916 6327 -673 5 1377 6903 78 25 2 chrX 103917997 103919344 -62730952 + L1_Mus2 LINE L1 5178 6562 -4 5 1377 496 182 40 20 chrX 103919344 103919445 -62730851 + ORR1A4 LTR MaLR 27 129 -197 5 1377 16321 103 210 11 chrX 103919445 103922073 -62728223 + L1Md_F LINE L1 212 3835 -2048 5 1377 248 0 31 0 chrX 103922073 103922105 -62728191 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 5 1377 16321 84 308 5 chrX 103922105 103922770 -62727526 + L1Md_F LINE L1 3836 4502 -1381 5 1377 1746 132 12 62 chrX 103922770 103923109 -62727187 - RLTRETN_Mm LTR ERVK 0 322 1 5 1377 16321 84 308 5 chrX 103923109 103923983 -62726313 + L1Md_F LINE L1 4503 5372 -511 5 1377 1709 86 0 8 chrX 103923985 103924244 -62726052 + L1Md_Gf LINE L1 86 342 -6180 5 1377 10638 84 10 12 chrX 103924244 103925958 -62724338 + MuRRS-int LTR ERV1 1951 4690 0 5 1377 4227 29 0 0 chrX 103925958 103926440 -62723856 + LTRIS_Mm LTR ERV1 1 482 0 5 1377 30290 39 1 2 chrX 103926440 103930358 -62719938 + L1Md_T LINE L1 1673 5586 -297 5 1377 8230 44 1 0 chrX 103930358 103931353 -62718943 + L1Md_T LINE L1 5587 6582 0 5 1377 1740 70 0 0 chrX 103931353 103931581 -62718715 + L1Md_F2 LINE L1 5358 5585 -298 5 1377 7413 77 3 4 chrX 103931582 103932576 -62717720 + L1Md_F2 LINE L1 5587 6579 -3 5 1377 1123 163 35 5 chrX 103932576 103932779 -62717517 + ORR1A4 LTR MaLR 121 329 0 5 1377 2196 227 85 32 chrX 103932782 103933414 -62716882 + Lx2B LINE L1 6325 6990 -10 5 1377 28 48 0 0 chrX 103933618 103933660 -62716636 + AT_rich Low_complexity Low_complexity 1 42 0 5 1377 367 71 23 34 chrX 103935511 103935599 -62714697 + (TTTTTG)n Simple_repeat Simple_repeat 2 88 0 5 1377 2242 42 11 3 chrX 103935637 103935920 -62714376 - L1Md_F2 LINE L1 -12 6570 6286 5 1377 730 273 162 83 chrX 103936528 103936797 -62713499 - ORR1E LTR MaLR -74 255 4 5 172 15286 81 2 2 chrX 103938603 103941462 -62708834 - L1Md_F2 LINE L1 -10 6572 3713 5 1378 7404 62 3 0 chrX 103941463 103943103 -62707193 - L1Md_F2 LINE L1 0 6582 4938 5 1378 4393 117 49 3 chrX 103943105 103943844 -62706452 - L1Md_F2 LINE L1 -5472 1144 372 5 1378 1098 106 17 0 chrX 103944123 103944302 -62705994 - L1_Mus4 LINE L1 -5 6631 6450 5 1378 4717 89 11 0 chrX 103944303 103945117 -62705179 + L1_Mus4 LINE L1 5421 6241 -395 5 1378 636 256 36 38 chrX 103945210 103945593 -62704703 - L1ME1 LINE L1 -308 5934 5543 5 1378 315 261 17 17 chrX 103945707 103945824 -62704472 - Lx2B LINE L1 -2 6998 6882 5 1378 6789 129 12 9 chrX 103945828 103946918 -62703378 + Lx3A LINE L1 5882 6974 -7 5 1378 619 304 10 72 chrX 103946986 103947138 -62703158 - B4A SINE B4 -78 214 75 5 1378 7220 70 53 2 chrX 103947138 103948111 -62702185 - RLTR13D5 LTR ERVK 0 1023 1 5 1378 619 304 10 72 chrX 103948111 103948167 -62702129 - B4A SINE B4 -218 74 20 5 1378 1149 55 7 0 chrX 103948490 103948635 -62701661 + B1_Mm SINE Alu 2 147 0 5 1378 284 95 0 0 chrX 103949069 103949111 -62701185 + B1_Mm SINE Alu 106 147 0 5 1378 285 51 0 0 chrX 103949111 103949150 -62701146 + (A)n Simple_repeat Simple_repeat 1 39 0 5 1378 522 265 18 6 chrX 103949656 103949823 -62700473 + Lx9 LINE L1 7301 7469 -175 5 1378 2866 96 0 12 chrX 103949898 103950299 -62699997 - MTA_Mm LTR MaLR 0 396 1 5 1378 1167 81 0 0 chrX 103951498 103951671 -62698625 + (TCTA)n Simple_repeat Simple_repeat 2 174 0 5 1378 1721 186 51 17 chrX 103951689 103952044 -62698252 + ORR1B2 LTR MaLR 1 367 0 5 1378 576 0 0 0 chrX 103952053 103952117 -62698179 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 5 1378 209 217 0 12 chrX 103952158 103952242 -62698054 + (TA)n Simple_repeat Simple_repeat 2 84 0 5 1378 367 253 34 67 chrX 103952273 103952362 -62697934 - RSINE1 SINE B4 -28 137 52 5 1378 356 59 0 19 chrX 103952445 103952497 -62697799 + (TCCC)n Simple_repeat Simple_repeat 4 54 0 5 1378 216 0 0 0 chrX 103952522 103952546 -62697750 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 5 1378 711 226 128 11 chrX 103952570 103952758 -62697538 - B3 SINE B2 -5 211 2 5 1378 323 254 9 1 chrX 103952758 103952888 -62697408 - L1M3 LINE L1 -847 5299 5169 5 1378 585 148 24 8 chrX 103952888 103953011 -62697285 + CT-rich Low_complexity Low_complexity 1 125 0 5 1378 668 283 59 19 chrX 103953021 103953342 -62696954 - L1M3 LINE L1 -1007 5133 4800 5 1378 267 384 63 8 chrX 103953567 103953693 -62696603 + B4A SINE B4 157 289 -3 5 1378 544 192 335 0 chrX 103953744 103953905 -62696391 - B3 SINE B2 -1 215 1 6 1378 474 242 109 36 chrX 103954372 103954676 -62695620 - L1M3 LINE L1 -1403 4737 4412 5 1378 484 224 144 20 chrX 103954761 103954907 -62695389 - Lx6 LINE L1 -4 7456 7293 6 1378 7306 88 4 23 chrX 103955018 103956343 -62693953 - L1_Mus3 LINE L1 -2 6636 5367 6 1378 640 319 76 36 chrX 103956343 103956641 -62693655 - L1M3 LINE L1 -1980 4160 3852 5 1378 1160 264 74 0 chrX 103956641 103956994 -62693302 - MTE2b LTR MaLR 0 379 1 6 1378 640 319 76 36 chrX 103956994 103957327 -62692969 - L1M3 LINE L1 -2289 3851 3504 5 1378 375 23 0 0 chrX 103957656 103957700 -62692596 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1378 540 280 97 0 chrX 103957700 103957957 -62692339 - L1MA6 LINE L1 -362 5938 5657 6 1378 4701 213 65 48 chrX 103957980 103958688 -62691608 - Lx7 LINE L1 0 7696 7005 6 1378 5916 103 10 3 chrX 103958688 103959562 -62690734 - Lx3A LINE L1 -8 6973 6094 6 1378 4701 213 65 48 chrX 103959562 103960134 -62690162 - Lx7 LINE L1 -692 7004 6394 6 1378 1687 157 46 34 chrX 103960194 103960544 -62689752 - L1_Mur3 LINE L1 -249 5631 5278 6 1378 225 0 0 0 chrX 103960754 103960779 -62689517 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 6 1378 810 281 27 5 chrX 103960779 103960954 -62689342 - B3A SINE B2 -20 178 2 6 1378 1959 61 0 8 chrX 103961653 103961901 -62688395 - L1_Mus1 LINE L1 0 6567 6322 6 1378 1421 110 3 5 chrX 103961901 103962124 -62688172 + L1Md_F2 LINE L1 6140 6325 -257 6 1378 289 137 0 76 chrX 103962414 103962493 -62687803 - L1_Mus3 LINE L1 -1 6637 6565 6 1378 203 224 0 0 chrX 103962682 103962715 -62687581 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 1378 1139 61 7 0 chrX 103962715 103962862 -62687434 - B1_Mus1 SINE Alu 0 148 1 6 1378 203 224 0 0 chrX 103962862 103962877 -62687419 + (TTTG)n Simple_repeat Simple_repeat 3 17 0 6 1378 494 239 64 0 chrX 103962929 103963038 -62687258 + B1_Mur2 SINE Alu 3 118 -31 6 1378 21 0 0 0 chrX 103963323 103963344 -62686952 + AT_rich Low_complexity Low_complexity 1 21 0 6 1378 1682 261 46 19 chrX 103963345 103963597 -62686699 + L1_Mur3 LINE L1 4029 4275 -1605 6 1378 423 0 0 0 chrX 103963597 103963644 -62686652 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1378 222 37 0 0 chrX 103963644 103963670 -62686626 + (GA)n Simple_repeat Simple_repeat 2 28 0 6 1378 1682 261 46 19 chrX 103963670 103964045 -62686251 + L1_Mur3 LINE L1 4276 4673 -1207 6 1378 630 255 19 6 chrX 103964046 103964204 -62686092 + Lx8 LINE L1 6864 7023 -450 6 1378 1422 257 44 39 chrX 103964215 103964603 -62685693 - RLTR18B LTR ERVK 0 512 123 6 1378 319 292 20 20 chrX 103964604 103964702 -62685594 - RLTR18B LTR ERVK -313 199 102 6 1378 694 201 88 20 chrX 103964830 103964977 -62685319 - RLTR18B LTR ERVK -335 177 21 6 1378 251 293 12 0 chrX 103964978 103965060 -62685236 + Lx8 LINE L1 7078 7160 -313 6 1378 4264 38 0 0 chrX 103965336 103965837 -62684459 - L1_Mus1 LINE L1 0 6567 6067 6 1378 2407 290 112 17 chrX 103966270 103967281 -62683015 + Lx8 LINE L1 6339 7445 -28 6 1378 601 283 55 17 chrX 103967529 103967820 -62682476 - L1MB4 LINE L1 -2 6417 6116 6 1378 476 200 151 8 chrX 103967825 103967951 -62682345 - B1_Mur2 SINE Alu -5 144 1 6 1378 1748 251 25 58 chrX 103968028 103968275 -62682021 + Lx6 LINE L1 6949 7191 -269 6 1378 1216 117 11 6 chrX 103968275 103968456 -62681840 - B2_Mm2 SINE B2 -13 182 1 6 1378 1748 251 25 58 chrX 103968456 103968738 -62681558 + Lx6 LINE L1 7192 7460 0 6 1378 281 118 58 12 chrX 103969384 103969470 -62680826 + (TTATA)n Simple_repeat Simple_repeat 5 94 0 6 1378 358 233 21 0 chrX 103969487 103969635 -62680661 - L1MB4 LINE L1 -699 5693 5543 6 1378 7081 55 0 3 chrX 103969729 103970687 -62679609 - L1Md_F2 LINE L1 0 6582 5664 6 1378 453 182 0 54 chrX 103970883 103970976 -62679320 - B3A SINE B2 -73 125 38 6 1378 1073 233 155 3 chrX 103970976 103971286 -62679010 + ORR1D2 LTR MaLR 1 357 -13 6 1378 328 270 153 26 chrX 103971314 103971504 -62678792 - L1MB4 LINE L1 -3930 2454 2241 6 1378 740 300 26 77 chrX 103971715 103971910 -62678386 - B3A SINE B2 -8 187 3 6 1378 506 167 0 64 chrX 103972276 103972407 -62677889 + Lx7 LINE L1 5635 5787 -1909 6 1378 1810 71 4 19 chrX 103972563 103972823 -62677473 + L1_Mus2 LINE L1 6311 6566 0 6 1378 796 170 46 0 chrX 103972854 103973007 -62677289 + B2_Mm2 SINE B2 16 175 -20 6 1378 21 0 0 0 chrX 103973007 103973028 -62677268 + AT_rich Low_complexity Low_complexity 1 21 0 6 1378 605 270 13 0 chrX 103973161 103973313 -62676983 - B3 SINE B2 -61 155 2 6 1378 585 105 0 0 chrX 103973319 103973405 -62676891 + (TG)n Simple_repeat Simple_repeat 1 86 0 6 1378 193 163 20 20 chrX 103973920 103973970 -62676326 + CT-rich Low_complexity Low_complexity 1 50 0 6 1378 234 183 42 0 chrX 103974030 103974101 -62676195 + CT-rich Low_complexity Low_complexity 3 76 0 6 1378 229 192 0 37 chrX 103974905 103974959 -62675337 + A-rich Low_complexity Low_complexity 1 52 0 6 1378 286 318 49 22 chrX 103975287 103975512 -62674784 - L1MC4 LINE L1 -98 7944 7714 6 1378 276 30 0 0 chrX 103975521 103975554 -62674742 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 1378 728 114 0 0 chrX 103975554 103975649 -62674647 - B1_Mus2 SINE Alu -9 138 44 6 1378 246 280 117 40 chrX 103975922 103976220 -62674076 - L1MC4 LINE L1 -614 7428 7108 6 1378 704 288 35 52 chrX 103976349 103976771 -62673525 + Lx7 LINE L1 5776 6190 -1506 6 1378 678 276 0 7 chrX 103976873 103977008 -62673288 + RSINE1 SINE B4 26 159 -6 6 1378 961 246 28 24 chrX 103977038 103977250 -62673046 - B3 SINE B2 -2 214 2 6 1378 470 307 98 60 chrX 103977302 103977669 -62672627 + Lx8 LINE L1 7088 7468 -5 6 1378 21 0 0 0 chrX 103977670 103977691 -62672605 + AT_rich Low_complexity Low_complexity 1 21 0 6 1378 1573 217 223 31 chrX 103977896 103978505 -62671791 + L1_Rod LINE L1 2262 2987 -2860 6 1378 216 97 0 0 chrX 103979505 103979536 -62670760 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 6 1378 331 271 206 0 chrX 103979745 103979900 -62670396 - Charlie1a DNA MER1_type -230 1225 1039 6 1378 672 13 0 0 chrX 103980192 103980269 -62670027 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 6 1378 189 0 0 0 chrX 103980269 103980290 -62670006 + (TC)n Simple_repeat Simple_repeat 1 21 0 6 1378 1105 108 11 0 chrX 103980297 103980473 -62669823 + (TCCC)n Simple_repeat Simple_repeat 1 178 0 6 1378 5012 88 14 44 chrX 103980543 103981312 -62668984 - Lx2A1 LINE L1 -2 7006 6261 6 1378 18323 76 25 45 chrX 103981319 103981766 -62668530 - L1_Mm LINE L1 -1019 4864 4437 6 1378 5406 7 0 0 chrX 103981766 103982365 -62667931 - L1Md_A LINE L1 0 6582 5984 6 1378 18323 76 25 45 chrX 103982365 103984597 -62665699 - L1_Mm LINE L1 -1447 4436 2184 6 1378 231 279 16 16 chrX 103984597 103984659 -62665637 + LTR68 LTR ERV1 251 312 -428 6 1378 18323 76 25 45 chrX 103984659 103984839 -62665457 - L1_Mm LINE L1 -1447 2183 2001 6 1378 7637 55 0 4 chrX 103984832 103985958 -62664338 - L1Md_F2 LINE L1 0 6582 5461 6 1378 5180 99 33 12 chrX 103985961 103987518 -62662778 - L1Md_F LINE L1 -3868 2015 424 6 1378 245 304 51 0 chrX 103987899 103987978 -62662318 - B4 SINE B4 -172 120 38 6 1378 4506 84 8 2 chrX 103988224 103988835 -62661461 - L1_Mus3 LINE L1 -7 6631 6017 6 1378 1032 200 53 10 chrX 103988869 103989076 -62661220 + B3 SINE B2 1 216 0 6 1378 289 310 93 17 chrX 103989526 103989653 -62660643 + MIRb SINE MIR 59 193 -75 6 1378 333 0 0 0 chrX 103989917 103989954 -62660342 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1378 623 97 0 17 chrX 103989956 103990071 -62660225 + (CAGAGA)n Simple_repeat Simple_repeat 2 114 0 6 1378 1060 117 12 0 chrX 103990301 103990463 -62659833 - Lx3A LINE L1 -354 6627 6464 6 1378 3073 47 5 20 chrX 103990463 103990857 -62659439 + Lx3_Mus LINE L1 6621 7008 -1 6 1378 232 339 109 80 chrX 103991147 103991285 -62659011 - Charlie4z DNA MER1_type -5 162 21 6 1378 330 327 87 39 chrX 103991793 103992079 -62658217 + L1M4 LINE L1 4181 4480 -1666 6 1378 643 263 417 16 chrX 103992219 103992471 -62657825 - ORR1D2 LTR MaLR -12 358 6 6 1378 289 310 105 52 chrX 103993406 103993617 -62656679 + RSINE1 SINE B4 71 279 -13 6 1378 304 207 47 35 chrX 103993627 103993712 -62656584 + L1M4b LINE L1 1831 1916 -5418 6 1378 193 346 27 68 chrX 103994066 103994212 -62656084 + MIRc SINE MIR 4 143 -125 6 1378 261 0 0 0 chrX 103994500 103994529 -62655767 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 6 1378 1353 289 77 36 chrX 103994595 103995170 -62655126 - Lx7 LINE L1 -542 7154 6557 6 1378 729 276 0 18 chrX 103995695 103995861 -62654435 - RSINE1 SINE B4 0 165 3 6 1378 818 327 71 76 chrX 103996317 103996816 -62653480 + L1M4 LINE L1 226 723 -5819 6 1378 276 30 0 0 chrX 103996816 103996849 -62653447 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 1378 818 327 71 76 chrX 103996849 103997307 -62652989 + L1M4 LINE L1 724 1178 -5364 6 1378 1814 174 171 19 chrX 103997369 103998016 -62652280 - MTC-int LTR MaLR -421 837 2 6 1378 2261 154 62 8 chrX 103998026 103998412 -62651884 - MTC LTR MaLR -14 407 1 6 1378 1267 280 36 15 chrX 103998601 103999127 -62651169 - L1MA4 LINE L1 -360 5940 5404 6 1378 328 352 68 65 chrX 103999155 103999510 -62650786 - ORR1D1 LTR MaLR 0 374 19 6 1378 1314 318 134 4 chrX 103999529 103999990 -62650306 - MTE-int LTR MaLR -53 1527 1007 6 1378 1809 307 90 57 chrX 104000012 104000609 -62649687 - MTEa-int LTR MaLR -620 960 336 1 1378 216 67 0 0 chrX 104000609 104000639 -62649657 + (TAA)n Simple_repeat Simple_repeat 2 31 0 2 1378 1809 307 90 57 chrX 104000639 104000700 -62649596 - MTEa-int LTR MaLR -1245 335 277 1 1378 2002 163 40 3 chrX 104000700 104001050 -62649246 + ORR1B2 LTR MaLR 1 363 -4 3 1378 1809 307 90 57 chrX 104001050 104001087 -62649209 - MTEa-int LTR MaLR -1304 276 245 1 1378 2647 52 52 0 chrX 104001087 104001435 -62648861 - L1Md_F2 LINE L1 -12 6570 6205 4 1378 1809 307 90 57 chrX 104001435 104001666 -62648630 - MTEa-int LTR MaLR -1336 244 1 1 1378 292 296 111 36 chrX 104001666 104001881 -62648415 - MTEa LTR MaLR 0 379 116 1 1378 963 283 29 2 chrX 104001918 104002326 -62647970 - L1M4 LINE L1 -759 5387 4969 5 1378 1071 84 14 0 chrX 104002441 104002583 -62647713 + B1_Mus1 SINE Alu 1 144 -4 6 1378 276 341 0 0 chrX 104002591 104002676 -62647620 + Lx8 LINE L1 6191 6275 -1198 7 1378 652 312 76 4 chrX 104002791 104003016 -62647280 + Lx8 LINE L1 6593 6833 -640 7 1378 701 320 5 5 chrX 104003020 104003221 -62647075 + Lx8 LINE L1 6502 6702 -771 8 1378 301 217 109 0 chrX 104003232 104003324 -62646972 + L1MC4a LINE L1 7740 7841 -41 9 1378 611 287 64 39 chrX 104003443 104003726 -62646570 - L1MB5 LINE L1 -11 6163 5874 1 1378 294 256 148 72 chrX 104003823 104004046 -62646250 + Lx9 LINE L1 7405 7644 0 1 1378 322 274 113 11 chrX 104004032 104004236 -62646060 + L1MB7 LINE L1 5652 5877 -301 1 1378 240 329 55 73 chrX 104004936 104005100 -62645196 - MIR3 SINE MIR -45 163 3 1 1378 224 289 169 18 chrX 104006092 104006203 -62644093 + MIRb SINE MIR 31 168 -100 1 1378 30699 97 15 6 chrX 104006463 104011691 -62638605 + L1Md_F2 LINE L1 307 5586 -297 1 1378 7420 66 15 8 chrX 104011691 104012677 -62637619 + L1Md_F2 LINE L1 5587 6579 -3 1 1378 2815 313 53 28 chrX 104012705 104013831 -62636465 - Lx8 LINE L1 -196 7277 6123 1 1378 3644 87 4 2 chrX 104013829 104014324 -62635972 - L1_Mur1 LINE L1 -97 5789 5294 1 1378 2929 127 15 17 chrX 104014324 104014797 -62635499 + Lx3A LINE L1 6498 6969 -12 1 1378 252 59 0 0 chrX 104014797 104014831 -62635465 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1378 302 360 68 11 chrX 104015010 104015187 -62635109 + L1MEf LINE L1 1347 1533 -4882 2 1378 32 57 0 0 chrX 104015273 104015326 -62634970 + AT_rich Low_complexity Low_complexity 1 53 0 2 1378 274 307 88 10 chrX 104015345 104015539 -62634757 + L1MEf LINE L1 2023 2231 -4169 2 1378 1128 124 51 0 chrX 104015555 104015733 -62634563 + B2_Mm2 SINE B2 1 187 -8 2 1378 22 0 0 0 chrX 104016022 104016044 -62634252 + AT_rich Low_complexity Low_complexity 1 22 0 2 1378 200 393 34 0 chrX 104017015 104017104 -62633192 - MIRb SINE MIR -8 260 169 2 1378 4041 52 0 44 chrX 104017600 104018175 -62632121 + L1Md_F2 LINE L1 6049 6582 0 2 1378 3023 278 48 90 chrX 104018251 104019419 -62630877 + Lx8 LINE L1 6355 7473 0 2 1378 821 259 60 42 chrX 104019480 104019814 -62630482 + CR1_Mam LINE CR1 194 533 -1671 2 1378 765 151 108 27 chrX 104020318 104020498 -62629798 - B3 SINE B2 -5 188 2 2 1378 525 327 61 46 chrX 104021439 104021702 -62628594 - MIRc SINE MIR 0 268 2 2 1378 563 0 15 0 chrX 104021769 104021836 -62628460 + (GA)n Simple_repeat Simple_repeat 2 69 0 3 1378 291 402 103 50 chrX 104022373 104022635 -62627661 - LTR16E1 LTR ERVL -212 326 51 3 1378 239 287 112 19 chrX 104023113 104023241 -62627055 - MIRb SINE MIR -75 193 47 3 1378 400 299 6 41 chrX 104023287 104023458 -62626838 - L1MB7 LINE L1 -12 6172 6008 3 1378 933 124 21 0 chrX 104023473 104023618 -62626678 + B2_Mm2 SINE B2 2 149 -46 3 1378 355 298 78 26 chrX 104023724 104023954 -62626342 - L1MA4 LINE L1 -280 6020 5781 3 1378 269 273 64 35 chrX 104024052 104024223 -62626073 - L1MB7 LINE L1 -215 5959 5784 3 1378 547 314 70 51 chrX 104024223 104024578 -62625718 - ORR1D1 LTR MaLR -8 366 5 3 1378 1007 335 84 25 chrX 104024568 104025009 -62625287 - MTE-int LTR MaLR -39 1541 1075 3 1378 515 287 14 18 chrX 104025162 104025316 -62624980 + B1F1 SINE Alu 1 148 -1 3 1378 484 282 53 0 chrX 104025370 104025501 -62624795 - B1F2 SINE Alu -7 142 5 3 1378 947 153 7 0 chrX 104026319 104026463 -62623833 - B1_Mus2 SINE Alu 0 147 3 4 1378 23 54 0 0 chrX 104026831 104026868 -62623428 + AT_rich Low_complexity Low_complexity 1 37 0 4 1378 1185 149 0 5 chrX 104027103 104027298 -62622998 + B2_Mm2 SINE B2 2 195 0 4 1378 22 80 0 0 chrX 104027464 104027514 -62622782 + AT_rich Low_complexity Low_complexity 1 50 0 4 1378 2729 65 3 3 chrX 104027689 104028042 -62622254 - L1_Mus1 LINE L1 0 6567 6215 4 1378 363 23 0 0 chrX 104028932 104028976 -62621320 + (CTAA)n Simple_repeat Simple_repeat 3 46 0 4 1378 664 300 71 26 chrX 104029098 104029365 -62620931 - B4A SINE B4 -10 282 4 4 1378 23 0 0 0 chrX 104029566 104029589 -62620707 + AT_rich Low_complexity Low_complexity 1 23 0 4 1378 528 16 0 0 chrX 104029606 104029667 -62620629 + (TC)n Simple_repeat Simple_repeat 2 62 0 4 1378 252 0 0 0 chrX 104029667 104029694 -62620602 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1378 302 327 52 17 chrX 104029715 104029830 -62620466 - B2_Mm2 SINE B2 -75 120 2 5 1378 281 330 65 9 chrX 104030113 104030220 -62620076 + MIR3 SINE MIR 95 207 -1 5 1378 339 292 45 0 chrX 104030305 104030394 -62619902 + MER81 DNA AcHobo 1 93 -21 5 1378 522 0 0 0 chrX 104030420 104030478 -62619818 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1378 450 317 6 35 chrX 104032189 104032359 -62617937 + CT-rich Low_complexity Low_complexity 4 168 0 5 1378 207 0 0 0 chrX 104035698 104035721 -62614575 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 5 1378 396 350 91 20 chrX 104036109 104036307 -62613989 - AmnSINE1 SINE SINE -236 339 128 5 1378 642 47 0 0 chrX 104037246 104037332 -62612964 + (TA)n Simple_repeat Simple_repeat 1 86 0 5 1378 237 299 0 49 chrX 104037443 104037524 -62612772 + MIRb SINE MIR 123 199 -69 5 1378 523 269 10 0 chrX 104037533 104037637 -62612659 + ID_B1 SINE B4 105 209 -15 5 1378 495 118 0 0 chrX 104037638 104037714 -62612582 + (CA)n Simple_repeat Simple_repeat 2 77 0 6 1378 227 122 0 24 chrX 104038088 104038130 -62612166 + Tigger15a DNA TcMar 95 135 -580 6 1378 26 30 0 0 chrX 104039560 104039593 -62610703 + AT_rich Low_complexity Low_complexity 1 33 0 6 1378 251 206 26 53 chrX 104039841 104039954 -62610342 + GA-rich Low_complexity Low_complexity 2 111 0 6 1378 450 353 6 34 chrX 104040297 104040476 -62609820 + MIRb SINE MIR 16 189 -79 6 1378 1062 24 0 0 chrX 104040766 104040891 -62609405 + (TCTCCC)n Simple_repeat Simple_repeat 3 127 0 6 1378 230 298 71 0 chrX 104040927 104041011 -62609285 - L2c LINE L2 -36 3351 3262 6 1378 574 85 15 100 chrX 104042068 104042198 -62608098 + Lx9 LINE L1 7520 7638 -6 6 1378 418 245 88 35 chrX 104043009 104043123 -62607173 - B1F SINE Alu -8 141 22 6 1378 466 261 128 2 chrX 104043615 104043759 -62606537 - MIR SINE MIR -5 263 94 6 1378 971 82 7 0 chrX 104044011 104044146 -62606150 + B1_Mus2 SINE Alu 2 137 -10 7 1378 406 355 34 42 chrX 104044173 104044411 -62605885 + MER102c DNA MER1_type 85 320 -11 7 1378 317 247 105 68 chrX 104044527 104044718 -62605578 + L1ME3 LINE L1 5878 6075 -87 7 1378 239 407 123 7 chrX 104045439 104045585 -62604711 - RSINE1 SINE B4 0 165 3 7 1378 725 104 0 31 chrX 104045608 104045737 -62604559 + L1Md_F2 LINE L1 6446 6570 -12 7 1378 5556 184 54 7 chrX 104045992 104047033 -62603263 - Lx9 LINE L1 -169 7475 6386 7 1378 1350 82 33 0 chrX 104047652 104047836 -62602460 - B2_Mm2 SINE B2 -4 191 2 7 1378 262 339 94 15 chrX 104047841 104048051 -62602245 - MIRb SINE MIR -11 257 19 7 1378 305 328 32 48 chrX 104048274 104048460 -62601836 - MIRb SINE MIR -11 257 75 7 1378 251 54 0 26 chrX 104048703 104048741 -62601555 + (GA)n Simple_repeat Simple_repeat 2 38 0 7 1378 268 224 45 0 chrX 104048752 104048819 -62601477 + MLT1C LTR MaLR 394 463 -4 8 1378 622 271 14 0 chrX 104050015 104050159 -62600137 - ID_B1 SINE B4 0 224 79 8 1378 1100 278 33 40 chrX 104050411 104050861 -62599435 + Lx8 LINE L1 4682 5128 -752 8 1378 1211 275 18 128 chrX 104050857 104051492 -62598804 + Lx8 LINE L1 5327 5927 -1546 8 1378 281 365 104 52 chrX 104051679 104051890 -62598406 - L3 LINE CR1 -69 4420 4199 8 1378 612 343 82 0 chrX 104052111 104052379 -62597917 - L3 LINE CR1 -1009 3480 3191 8 1378 200 227 0 0 chrX 104053141 104053185 -62597111 + (TA)n Simple_repeat Simple_repeat 2 45 0 8 1378 1177 55 0 0 chrX 104054302 104054447 -62595849 + B1_Mus1 SINE Alu 2 146 -2 8 1378 207 0 0 0 chrX 104054447 104054470 -62595826 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 1378 517 311 43 6 chrX 104055061 104055223 -62595073 - MER5A DNA MER1_type -1 188 21 8 1378 22 0 0 0 chrX 104055558 104055580 -62594716 + AT_rich Low_complexity Low_complexity 1 22 0 8 1378 372 119 0 0 chrX 104055860 104055919 -62594377 + (TG)n Simple_repeat Simple_repeat 2 60 0 8 1378 229 309 136 58 chrX 104055987 104056193 -62594103 - ID_B1 SINE B4 0 224 3 9 1378 200 323 79 9 chrX 104058469 104058608 -62591688 + MIRm SINE MIR 95 247 -21 9 1378 222 384 36 29 chrX 104058639 104058776 -62591520 - MIR3 SINE MIR -40 168 31 9 1378 251 47 0 65 chrX 104059025 104059071 -62591225 + (TTTTG)n Simple_repeat Simple_repeat 1 43 0 9 1378 1100 27 6 109 chrX 104059071 104059236 -62591060 - B1_Mus1 SINE Alu 0 148 1 9 1378 7055 90 14 8 chrX 104059315 104060299 -62589997 - Lx LINE L1 0 6654 5665 9 1378 191 393 0 0 chrX 104060375 104060431 -62589865 - L2b LINE L2 -29 3346 3291 9 1378 1005 99 16 10 chrX 104060598 104060751 -62589545 + B1_Mus1 SINE Alu 6 311 0 9 1378 195 235 0 0 chrX 104060852 104060903 -62589393 + (TATG)n Simple_repeat Simple_repeat 1 51 0 9 1378 198 316 12 25 chrX 104061042 104061123 -62589173 - L3 LINE CR1 -686 3803 3724 9 1378 871 330 45 11 chrX 104061407 104061466 -62588830 - B4A SINE B4 -8 284 226 1 1378 210 37 0 0 chrX 104061466 104061493 -62588803 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1 1378 871 330 45 11 chrX 104061493 104061598 -62588698 - B4A SINE B4 -67 225 110 1 1378 342 0 0 0 chrX 104061598 104061636 -62588660 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1378 871 330 45 11 chrX 104061636 104061734 -62588562 - B4A SINE B4 -183 109 15 1 1378 549 251 124 11 chrX 104061739 104061924 -62588372 - ID_B1 SINE B4 -14 210 5 1 1378 241 194 0 114 chrX 104062658 104062728 -62587568 - MIR3 SINE MIR -24 184 123 1 1378 314 340 40 1 chrX 104063615 104063729 -62586567 - MIRb SINE MIR -125 143 20 1 1378 1463 44 22 0 chrX 104063859 104064039 -62586257 + B2_Mm2 SINE B2 2 185 -10 1 1378 458 335 82 0 chrX 104064049 104064219 -62586077 + MIRb SINE MIR 17 200 -68 1 1378 598 275 57 23 chrX 104064736 104064911 -62585385 + B3A SINE B2 2 182 -16 1 1378 251 191 0 14 chrX 104065523 104065592 -62584704 + (CATA)n Simple_repeat Simple_repeat 4 71 0 1 1378 397 249 123 34 chrX 104065592 104065793 -62584503 + MIRb SINE MIR 36 267 -1 1 1378 397 231 207 23 chrX 104068400 104068533 -62581763 + MIR SINE MIR 25 180 -88 1 1378 1083 29 44 7 chrX 104068673 104068810 -62581486 - B1_Mus1 SINE Alu -5 143 2 1 1378 468 0 0 0 chrX 104069525 104069577 -62580719 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 172 603 371 101 29 chrX 104070581 104071305 -62578991 + L1MDa LINE L1 34 809 -5824 1 1379 1547 238 98 13 chrX 104071527 104071906 -62578390 - MTD LTR MaLR -8 411 1 1 1379 237 128 26 0 chrX 104071910 104071949 -62578347 - B3A SINE B2 -158 40 1 1 1379 341 312 131 0 chrX 104071949 104072109 -62578187 + L1MDa LINE L1 1006 1186 -5447 1 1379 2617 98 8 8 chrX 104072109 104072498 -62577798 + Lx2 LINE L1 6608 6996 -1 1 1379 335 194 289 10 chrX 104072630 104072734 -62577562 + L1MDa LINE L1 1189 1321 -5312 1 1379 387 264 28 0 chrX 104072737 104072843 -62577453 + Lx9 LINE L1 7074 7182 -462 1 1379 303 28 0 0 chrX 104072846 104072882 -62577414 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1 1379 261 220 84 84 chrX 104072885 104073004 -62577292 + Lx8 LINE L1 7353 7471 -2 1 1379 552 278 153 28 chrX 104072986 104073423 -62576873 + L1MDa LINE L1 1275 1766 -4867 1 1379 787 159 51 0 chrX 104073587 104073725 -62576571 - B1_Mus1 SINE Alu 0 148 4 1 1379 1959 59 0 12 chrX 104073761 104074017 -62576279 - L1Md_F2 LINE L1 -5 6577 6325 1 1379 226 174 232 0 chrX 104074113 104074182 -62576114 - Charlie15a DNA MER1_type -34 190 106 1 1379 394 246 36 0 chrX 104074195 104074305 -62575991 + L1MDa LINE L1 1851 1964 -4669 1 1379 1131 262 198 15 chrX 104074320 104074715 -62575581 - Lx8 LINE L1 -449 7024 6558 1 1379 558 311 37 6 chrX 104074713 104074875 -62575421 + Lx8 LINE L1 7054 7220 -253 1 1379 267 315 35 44 chrX 104074888 104075001 -62575295 + RMER15 LTR ERVL 371 482 -93 1 1379 30 59 0 0 chrX 104075085 104075136 -62575160 + AT_rich Low_complexity Low_complexity 1 51 0 1 1379 286 222 116 111 chrX 104075144 104075316 -62574980 + L1MDa LINE L1 2039 2211 -4422 1 1379 402 277 126 37 chrX 104075695 104075830 -62574466 - B1_Mur3 SINE Alu -2 147 1 1 1379 294 242 19 83 chrX 104075736 104075844 -62574452 - MT2B2 LTR ERVL -330 254 154 1 1379 3025 66 2 17 chrX 104075931 104076333 -62573963 - MTA_Mm LTR MaLR 0 396 1 1 1379 1776 269 63 35 chrX 104076830 104077620 -62572676 + L1MA6 LINE L1 3582 4393 -1750 1 1379 1355 269 25 114 chrX 104077597 104077894 -62572402 + L1MA6 LINE L1 5703 6002 -298 1 1379 1073 85 0 0 chrX 104077894 104078028 -62572268 + B1_Mus1 SINE Alu 2 135 -13 1 1379 381 22 0 0 chrX 104078028 104078074 -62572222 + (CAAA)n Simple_repeat Simple_repeat 1 46 0 1 1379 1355 269 25 114 chrX 104078080 104078420 -62571876 + L1MA6 LINE L1 6003 6283 -17 1 1379 971 93 50 0 chrX 104078884 104079023 -62571273 - B1_Mus1 SINE Alu -1 147 2 1 1379 329 244 102 0 chrX 104080058 104080185 -62570111 + L1MA4 LINE L1 5785 5924 -376 1 1379 22 35 0 0 chrX 104081981 104082010 -62568286 + AT_rich Low_complexity Low_complexity 1 29 0 1 1379 2125 119 3 42 chrX 104083289 104083396 -62566900 + ORR1A2 LTR MaLR 1 97 -230 1 1379 1249 113 5 0 chrX 104083396 104083581 -62566715 + B2_Mm1t SINE B2 1 186 -7 1 1379 2125 119 3 42 chrX 104083581 104083805 -62566491 + ORR1A2 LTR MaLR 98 319 -8 1 1379 3351 43 2 0 chrX 104084073 104084468 -62565828 + MTA_Mm LTR MaLR 1 396 0 1 1379 8764 49 7 1 chrX 104084500 104085591 -62564705 + MTA_Mm-int LTR MaLR 1 1098 0 1 1379 3407 33 2 0 chrX 104085591 104085986 -62564310 + MTA_Mm LTR MaLR 1 396 0 1 1379 2840 164 70 58 chrX 104086013 104086405 -62563891 + L1_Mur1 LINE L1 696 1124 -5860 1 1379 1553 47 0 10 chrX 104086405 104086600 -62563696 + B2_Mm1t SINE B2 1 193 0 1 1379 7265 151 28 7 chrX 104086600 104088021 -62562275 + L1_Mur1 LINE L1 1125 2545 -3341 1 1379 5902 137 25 18 chrX 104088021 104089043 -62561253 + Lx2B LINE L1 5967 6995 -5 1 1379 189 382 62 31 chrX 104090336 104090498 -62559798 - MIR3 SINE MIR -23 185 19 1 1379 268 358 78 40 chrX 104093751 104094202 -62556094 + L2 LINE L2 1046 1513 -1906 1 1379 264 287 103 17 chrX 104094628 104094745 -62555551 - HAL1 LINE L1 -2338 169 43 1 1379 708 183 34 34 chrX 104094938 104095085 -62555211 - B1_Mur3 SINE Alu 0 149 3 1 1379 1183 54 0 0 chrX 104095115 104095263 -62555033 + B1_Mus1 SINE Alu 1 148 0 1 1379 246 192 0 0 chrX 104095271 104095323 -62554973 + A-rich Low_complexity Low_complexity 1 52 0 1 1379 861 168 9 99 chrX 104096063 104096275 -62554021 - Lx4B LINE L1 -5 7053 6861 1 1379 3950 65 17 19 chrX 104096292 104096825 -62553471 - L1_Mus1 LINE L1 -1 6566 6035 1 1379 1069 43 0 21 chrX 104096837 104096978 -62553318 - B1_Mus1 SINE Alu -1 147 10 1 1379 442 172 27 100 chrX 104096884 104096994 -62553302 - MT2B LTR ERVL -344 257 156 1 1379 2790 57 20 1 chrX 104096994 104097371 -62552925 - L1Md_F2 LINE L1 -537 6045 5655 1 1379 488 54 12 108 chrX 104097329 104097376 -62552920 + L1Md_F2 LINE L1 5631 5677 -890 1 1379 360 97 0 0 chrX 104097376 104097438 -62552858 + (TTAG)n Simple_repeat Simple_repeat 3 64 0 1 1379 1124 65 0 0 chrX 104097438 104097576 -62552720 - B1_Mm SINE Alu -8 139 2 1 1379 488 54 12 108 chrX 104097576 104097610 -62552686 + L1_Mus1 LINE L1 5678 5704 -863 1 1379 1163 211 0 36 chrX 104097594 104097815 -62552481 - Lx LINE L1 -195 6855 6643 1 1379 27 0 0 0 chrX 104098070 104098097 -62552199 + AT_rich Low_complexity Low_complexity 1 27 0 1 1379 3129 154 29 15 chrX 104098260 104098808 -62551488 - Lx LINE L1 -4 6650 6095 1 1379 1185 62 0 0 chrX 104099067 104099213 -62551083 + B1_Mus2 SINE Alu 2 147 0 1 1379 183 42 0 0 chrX 104099215 104099239 -62551057 + (CAAAC)n Simple_repeat Simple_repeat 1 24 0 1 1379 254 264 31 39 chrX 104099400 104099530 -62550766 + Lx3C LINE L1 6753 6881 -95 1 1379 756 292 30 20 chrX 104099701 104099900 -62550396 + B4A SINE B4 86 286 -6 1 1379 22 35 0 0 chrX 104100160 104100189 -62550107 + AT_rich Low_complexity Low_complexity 1 29 0 1 1379 338 367 57 0 chrX 104101014 104101191 -62549105 - MIR SINE MIR -10 252 66 1 1379 6397 187 39 24 chrX 104101361 104102666 -62547630 + Lx9 LINE L1 6312 7636 -8 1 1379 265 238 112 0 chrX 104102767 104102847 -62547449 - PB1D10 SINE Alu -1 116 28 1 1379 349 267 10 91 chrX 104102855 104102954 -62547342 + MTEa LTR MaLR 6 96 -283 1 1379 2548 176 26 59 chrX 104103323 104103903 -62546393 + RLTR31_Mm LTR ERVK 1 561 0 1 1379 819 320 30 93 chrX 104103976 104104182 -62546114 + L1MC2 LINE L1 5645 5855 -489 1 1379 590 258 58 42 chrX 104104182 104104372 -62545924 + B3A SINE B2 1 193 -5 1 1379 2007 239 18 10 chrX 104104372 104104893 -62545403 + L1MC2 LINE L1 5851 6336 -8 1 1379 450 0 0 0 chrX 104104933 104104983 -62545313 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1379 779 29 0 0 chrX 104105563 104105666 -62544630 + L1Md_T LINE L1 6479 6581 -1 1 1379 468 157 5 5 chrX 104105698 104105786 -62544510 + B2_Mm2 SINE B2 2 89 -127 1 1379 839 252 76 72 chrX 104106205 104106398 -62543898 - L1MB8 LINE L1 -155 6023 5819 1 1379 663 237 0 0 chrX 104106398 104106533 -62543763 - B1_Mm SINE Alu -8 139 5 1 1379 839 252 76 72 chrX 104106533 104106758 -62543538 - L1MB8 LINE L1 -360 5818 5603 1 1379 1689 197 53 34 chrX 104106915 104107058 -62543238 - RLTR11A LTR ERVK 0 528 386 1 1379 1236 97 5 31 chrX 104107058 104107249 -62543047 - B2_Mm2 SINE B2 -8 187 2 1 1379 1689 197 53 34 chrX 104107249 104107483 -62542813 - RLTR11A LTR ERVK -143 385 144 1 1379 1210 277 76 35 chrX 104107525 104108158 -62542138 - L1MB8 LINE L1 -1728 4418 3760 1 1379 543 242 39 8 chrX 104108179 104108308 -62541988 - B3 SINE B2 -6 210 78 1 1379 243 0 0 0 chrX 104108331 104108358 -62541938 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1379 656 275 165 27 chrX 104108428 104108841 -62541455 - L1MB8 LINE L1 -2571 3569 3097 1 1379 420 20 0 0 chrX 104108841 104108890 -62541406 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 1 1379 656 272 162 26 chrX 104108890 104109424 -62540872 - L1MB8 LINE L1 -3050 3096 2504 1 1379 1292 66 0 57 chrX 104109487 104109680 -62540616 + B2_Mm2 SINE B2 2 183 -12 1 1379 315 299 37 9 chrX 104109695 104109803 -62540493 - L1MB8 LINE L1 -3781 2385 2275 1 1379 207 0 0 0 chrX 104109804 104109827 -62540469 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1 1379 593 256 0 0 chrX 104109860 104109977 -62540319 - B1F SINE Alu 0 149 33 1 1379 304 217 14 28 chrX 104109981 104110052 -62540244 - ID2 SINE ID -11 72 3 1 1379 552 30 0 0 chrX 104110261 104110327 -62539969 + (TTTC)n Simple_repeat Simple_repeat 2 67 0 1 1379 244 236 303 0 chrX 104110609 104110698 -62539598 + Lx8 LINE L1 6607 6722 -751 1 1379 582 15 0 0 chrX 104110743 104110810 -62539486 + (TA)n Simple_repeat Simple_repeat 1 67 0 1 1379 1135 330 75 42 chrX 104110821 104111448 -62538848 + Lx8 LINE L1 6824 7471 -2 1 1379 207 0 0 0 chrX 104111641 104111664 -62538632 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1379 1427 73 21 0 chrX 104111664 104111855 -62538441 - B2_Mm2 SINE B2 0 195 1 1 1379 193 311 54 0 chrX 104112036 104112110 -62538186 + MIR SINE MIR 95 172 -90 1 1379 234 0 0 0 chrX 104115525 104115551 -62534745 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1379 200 59 29 0 chrX 104116184 104116218 -62534078 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1 1379 234 0 0 0 chrX 104116480 104116506 -62533790 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1379 27 0 0 0 chrX 104116935 104116962 -62533334 + AT_rich Low_complexity Low_complexity 1 27 0 1 1379 33 0 0 0 chrX 104118066 104118099 -62532197 + AT_rich Low_complexity Low_complexity 1 33 0 1 1379 186 73 73 0 chrX 104119730 104119771 -62530525 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 1 1379 273 75 0 0 chrX 104121282 104121322 -62528974 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 1379 450 307 83 39 chrX 104121325 104121481 -62528815 - RSINE1 SINE B4 0 165 3 1 1379 478 307 0 21 chrX 104124315 104124455 -62525841 - B1F SINE Alu -12 137 1 1 1379 276 206 90 36 chrX 104124681 104124792 -62525504 - Lx7 LINE L1 -17 7679 7563 1 1379 21 36 0 0 chrX 104127082 104127110 -62523186 + AT_rich Low_complexity Low_complexity 1 28 0 1 1379 242 173 0 47 chrX 104127773 104127858 -62522438 + A-rich Low_complexity Low_complexity 1 81 0 2 1379 25 65 0 0 chrX 104128132 104128178 -62522118 + AT_rich Low_complexity Low_complexity 1 46 0 2 1379 21 36 0 0 chrX 104129190 104129218 -62521078 + AT_rich Low_complexity Low_complexity 1 28 0 2 1379 1043 59 0 0 chrX 104130143 104130278 -62520018 - L1_Mus1 LINE L1 -2 6565 6431 2 1379 1173 74 57 11 chrX 104130280 104130457 -62519839 - B2_Mm2 SINE B2 -8 187 3 2 1379 364 208 139 19 chrX 104130554 104130662 -62519634 + L1M2 LINE L1 5606 5726 -586 2 1379 1752 125 81 13 chrX 104130848 104130963 -62519333 - Lx LINE L1 0 6654 6520 2 1379 207 0 0 0 chrX 104130963 104130986 -62519310 + (CCCA)n Simple_repeat Simple_repeat 3 25 0 2 1379 1752 125 81 13 chrX 104130986 104131179 -62519117 - Lx LINE L1 -135 6519 6326 2 1379 210 356 118 13 chrX 104131359 104131525 -62518771 - MIRb SINE MIR -62 200 27 2 1379 1324 238 59 25 chrX 104131563 104131917 -62518379 - Lx6 LINE L1 -26 7434 7069 2 1379 320 59 20 0 chrX 104131972 104132023 -62518273 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 2 1379 384 256 146 0 chrX 104132028 104132110 -62518186 - PB1D10 SINE Alu -16 101 8 2 1379 248 330 85 0 chrX 104132331 104132425 -62517871 - MIRc SINE MIR -110 158 57 2 1379 2202 67 24 0 chrX 104132467 104132764 -62517532 - L1_Mus3 LINE L1 -10 6628 6325 2 1379 1283 151 66 19 chrX 104132939 104133059 -62517237 - RMER1C Other Other -8 1334 1216 2 1379 432 0 0 0 chrX 104133059 104133107 -62517189 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 1379 1283 151 66 19 chrX 104133107 104133242 -62517054 - RMER1C Other Other -127 1215 1067 2 1379 362 338 118 27 chrX 104133450 104133779 -62516517 + L2a LINE L2 2987 3345 -81 2 1379 273 311 48 56 chrX 104135411 104135537 -62514759 - MamSINE1 SINE tRNA -82 208 84 2 1379 378 0 0 0 chrX 104136291 104136333 -62513963 + (GA)n Simple_repeat Simple_repeat 1 42 0 2 1379 248 272 139 31 chrX 104136497 104136626 -62513670 + MLT1A1 LTR MaLR 254 396 -12 2 1379 376 246 177 35 chrX 104136720 104136918 -62513378 - Lx7 LINE L1 0 7696 7471 2 1379 198 0 0 0 chrX 104136925 104136947 -62513349 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 1379 279 0 0 0 chrX 104136960 104136991 -62513305 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2 1379 3078 203 16 18 chrX 104136999 104137607 -62512689 - Lx7 LINE L1 -308 7388 6782 2 1379 884 176 0 0 chrX 104137690 104137843 -62512453 - Lx7 LINE L1 -913 6783 6631 2 1379 22 0 0 0 chrX 104138215 104138237 -62512059 + AT_rich Low_complexity Low_complexity 1 22 0 2 1379 195 162 0 0 chrX 104138240 104138277 -62512019 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 1379 33 0 0 0 chrX 104138407 104138440 -62511856 + AT_rich Low_complexity Low_complexity 1 33 0 2 1379 636 148 0 0 chrX 104139587 104139695 -62510601 + (TCC)n Simple_repeat Simple_repeat 3 110 0 2 1379 1115 60 7 0 chrX 104139697 104139846 -62510450 - B2_Mm2 SINE B2 -44 151 2 2 1379 586 291 7 36 chrX 104139944 104140083 -62510213 + RSINE1 SINE B4 10 144 -21 2 1379 267 252 9 83 chrX 104140868 104140976 -62509320 + L1M1 LINE L1 5784 5883 -417 2 1379 590 269 27 14 chrX 104141025 104141172 -62509124 - B1_Mur1 SINE Alu 0 149 1 2 1379 594 51 0 0 chrX 104141267 104141345 -62508951 + (TC)n Simple_repeat Simple_repeat 2 79 0 2 1379 276 30 0 0 chrX 104141345 104141377 -62508919 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1379 520 301 0 7 chrX 104141537 104141691 -62508605 + L1MA6 LINE L1 6135 6287 -13 2 1379 814 95 0 0 chrX 104142240 104142356 -62507940 + URR1B DNA MER1_type 110 225 0 2 1379 2801 111 68 0 chrX 104142413 104142837 -62507459 - Lx3A LINE L1 -10 6971 6519 2 1379 218 207 0 17 chrX 104142901 104142960 -62507336 + CT-rich Low_complexity Low_complexity 3 60 0 2 1379 800 231 103 0 chrX 104143718 104143913 -62506383 - B3 SINE B2 -1 215 1 2 1379 23 0 0 0 chrX 104144065 104144088 -62506208 + AT_rich Low_complexity Low_complexity 1 23 0 2 1379 263 138 35 0 chrX 104144175 104144233 -62506063 + (TATAA)n Simple_repeat Simple_repeat 3 62 0 2 1379 551 180 16 54 chrX 104144233 104144362 -62505934 + Lx5 LINE L1 6864 6987 -63 2 1379 302 347 42 78 chrX 104144416 104144607 -62505689 - MIRc SINE MIR -46 222 39 2 1379 1018 195 22 18 chrX 104145595 104145820 -62504476 + Lx5 LINE L1 6825 7050 0 2 1379 647 169 99 26 chrX 104146017 104146119 -62504177 + Lx4B LINE L1 6892 6995 -63 2 1379 306 0 0 0 chrX 104146119 104146153 -62504143 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1379 647 169 99 26 chrX 104146153 104146202 -62504094 + Lx4B LINE L1 6996 7054 -4 2 1379 257 336 114 46 chrX 104146605 104146772 -62503524 - L2 LINE L2 -1834 1585 1410 2 1379 1014 43 0 7 chrX 104146772 104146911 -62503385 + L1Md_F3 LINE L1 6433 6570 -14 2 1379 257 336 114 46 chrX 104146911 104146980 -62503316 - L2 LINE L2 -2010 1409 1334 2 1379 405 0 0 0 chrX 104147838 104147883 -62502413 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1379 182 128 26 0 chrX 104148039 104148078 -62502218 + CT-rich Low_complexity Low_complexity 1 40 0 2 1379 321 100 0 0 chrX 104148197 104148247 -62502049 + (TATG)n Simple_repeat Simple_repeat 3 52 0 2 1379 1059 70 49 0 chrX 104148247 104148385 -62501911 - B2_Mm2 SINE B2 -42 153 9 2 1379 394 287 87 0 chrX 104148539 104148654 -62501642 + MIRb SINE MIR 76 200 -68 2 1379 238 65 0 0 chrX 104150039 104150070 -62500226 + URR1B DNA MER1_type 195 225 0 2 1379 582 256 43 28 chrX 104150872 104151013 -62499283 - MER5A DNA MER1_type -45 144 2 2 1379 3069 46 0 0 chrX 104152072 104152440 -62497856 - L1_Mus1 LINE L1 -102 6465 6098 2 1379 693 80 0 0 chrX 104152440 104152540 -62497756 + L1_Mus1 LINE L1 6461 6560 -7 2 1379 181 312 16 0 chrX 104153255 104153319 -62496977 - L2b LINE L2 0 3375 3311 2 1379 24 32 0 0 chrX 104154085 104154116 -62496180 + AT_rich Low_complexity Low_complexity 1 31 0 2 1379 1249 274 177 21 chrX 104154124 104154654 -62495642 - Lx9 LINE L1 -49 7595 6983 2 1379 282 87 0 0 chrX 104154831 104154877 -62495419 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1379 913 252 79 18 chrX 104154877 104155370 -62494926 - L1M2 LINE L1 -2785 3361 2845 2 1379 357 356 31 8 chrX 104155590 104155947 -62494349 + L1ME1 LINE L1 4899 5263 -883 2 1379 435 38 0 0 chrX 104156029 104156082 -62494214 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 1379 1118 79 0 0 chrX 104156203 104156342 -62493954 + B1_Mm SINE Alu 1 139 -8 2 1379 988 272 38 43 chrX 104156361 104156780 -62493516 + L1ME1 LINE L1 5447 5863 -316 2 1379 1154 302 92 10 chrX 104156876 104157290 -62493006 - MLT1C LTR MaLR -19 448 1 2 1379 687 225 153 16 chrX 104157384 104157574 -62492722 - B3 SINE B2 0 216 1 2 1379 386 256 153 15 chrX 104157688 104157819 -62492477 - B3 SINE B2 -44 172 24 2 1379 22 0 0 0 chrX 104158705 104158727 -62491569 + AT_rich Low_complexity Low_complexity 1 22 0 2 1379 226 323 0 0 chrX 104159206 104159271 -62491025 + (TG)n Simple_repeat Simple_repeat 1 65 0 2 1379 523 312 88 0 chrX 104159287 104159354 -62490942 - B4 SINE B4 -2 290 216 2 1379 531 0 0 0 chrX 104159354 104159413 -62490883 + (TTTTA)n Simple_repeat Simple_repeat 2 60 0 2 1379 523 312 88 0 chrX 104159413 104159515 -62490781 - B4 SINE B4 -77 215 107 2 1379 333 0 0 0 chrX 104159551 104159588 -62490708 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 2 1379 589 70 20 0 chrX 104160530 104160630 -62489666 + (GA)n Simple_repeat Simple_repeat 1 102 0 2 1379 1196 136 16 0 chrX 104161951 104162142 -62488154 - B2_Mm2 SINE B2 -1 194 1 2 1379 2195 243 94 115 chrX 104162232 104163286 -62487010 - RMER17B LTR ERVK -9 899 1 2 1379 35 0 0 0 chrX 104163417 104163452 -62486844 + AT_rich Low_complexity Low_complexity 1 35 0 2 1379 7523 91 8 0 chrX 104163477 104164939 -62485357 - L1_Mus1 LINE L1 0 6567 5092 2 1379 8497 77 16 45 chrX 104164965 104166289 -62484007 - MusHAL1 LINE L1 -281 2431 1147 2 1379 1940 141 0 79 chrX 104166291 104166621 -62483675 - L1VL4 LINE L1 -5808 494 191 2 1379 20820 80 3 1 chrX 104166662 104170218 -62480078 + L1Md_F LINE L1 503 4064 -1819 2 1379 1100 211 124 38 chrX 104170225 104170515 -62479781 - RLTR46 LTR ERVK -5 315 1 2 1379 1280 199 58 23 chrX 104170515 104170860 -62479436 - IAP-d-int LTR ERVK 0 6481 6125 2 1379 1681 152 74 0 chrX 104170839 104171205 -62479091 - IAPEY3-int LTR ERVK -297 7383 6965 2 1379 1289 147 112 0 chrX 104171205 104171429 -62478867 - IAP-d-int LTR ERVK -1287 5255 5007 2 1379 737 203 26 0 chrX 104171429 104171582 -62478714 - IAP-d-int LTR ERVK -6039 503 347 2 1379 652 148 18 34 chrX 104171579 104171726 -62478570 - IAP-d-int LTR ERVK -6369 173 55 2 1379 432 59 106 32 chrX 104171726 104171849 -62478447 + CT-rich Low_complexity Low_complexity 3 134 0 2 1379 566 267 46 0 chrX 104171855 104172072 -62478224 - IAPEY3-int LTR ERVK -6919 761 535 2 1379 329 289 41 69 chrX 104172123 104172268 -62478028 - IAPEY3-int LTR ERVK -7537 143 3 2 1379 1151 217 95 34 chrX 104172278 104172574 -62477722 - RLTR46 LTR ERVK -6 314 1 2 1379 12158 61 0 1 chrX 104172574 104174129 -62476167 + L1_Mm LINE L1 4059 5611 -272 2 1379 2772 51 19 14 chrX 104174129 104174490 -62475806 + L1Md_F2 LINE L1 6219 6581 -1 2 1379 855 192 28 28 chrX 104174687 104174869 -62475427 - B2_Mm2 SINE B2 -12 183 2 2 1379 394 311 4 4 chrX 104176706 104176820 -62473476 + PB1D10 SINE Alu 2 112 -5 2 1379 392 303 35 101 chrX 104177054 104177092 -62473204 + MLT1B LTR MaLR 230 262 -128 2 1379 192 77 0 0 chrX 104177092 104177118 -62473178 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 1379 392 303 35 101 chrX 104177118 104177248 -62473048 + MLT1B LTR MaLR 263 387 -3 2 1379 764 206 7 0 chrX 104177471 104177612 -62472684 + B1_Mur1 SINE Alu 2 143 -6 2 1379 751 122 15 0 chrX 104177614 104177745 -62472551 + (GAAA)n Simple_repeat Simple_repeat 3 135 0 2 1379 253 374 0 0 chrX 104177824 104177907 -62472389 - BC1_Mm scRNA scRNA -69 83 1 2 1379 1661 281 93 44 chrX 104178244 104179128 -62471168 - L1MD2 LINE L1 -18 6341 5415 2 1379 273 159 0 0 chrX 104179144 104179207 -62471089 + (TCTA)n Simple_repeat Simple_repeat 2 64 0 2 1379 220 62 19 77 chrX 104179209 104179236 -62471060 + polypurine Low_complexity Low_complexity 2 27 0 2 1379 273 29 0 0 chrX 104179236 104179270 -62471026 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1379 944 101 6 17 chrX 104179270 104179450 -62470846 + (GA)n Simple_repeat Simple_repeat 2 180 0 2 1379 220 62 19 77 chrX 104179450 104179473 -62470823 + polypurine Low_complexity Low_complexity 28 49 0 2 1379 529 354 71 43 chrX 104179923 104180386 -62469910 - L1ME4a LINE L1 -163 5961 5486 2 1379 26 30 0 0 chrX 104180445 104180478 -62469818 + AT_rich Low_complexity Low_complexity 1 33 0 2 1379 982 130 7 0 chrX 104180712 104180858 -62469438 - B1_Mus1 SINE Alu 0 148 2 2 1379 594 342 103 40 chrX 104181056 104181501 -62468795 + Lx8 LINE L1 6997 7469 -4 3 1379 186 133 0 0 chrX 104181661 104181691 -62468605 + (TTTTTG)n Simple_repeat Simple_repeat 4 33 0 3 1379 253 353 106 22 chrX 104182578 104182804 -62467492 - MIRb SINE MIR -8 260 16 3 1379 216 0 0 0 chrX 104182895 104182919 -62467377 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 3 1379 257 355 28 14 chrX 104182933 104183076 -62467220 + L1MDb LINE L1 7 151 -6258 3 1379 535 274 58 42 chrX 104183595 104183717 -62466579 + L1MDb LINE L1 888 1017 -5392 3 1379 2054 32 4 0 chrX 104183717 104183966 -62466330 + L1Md_F2 LINE L1 6332 6581 -1 3 1379 535 274 58 42 chrX 104183966 104184102 -62466194 + L1MDb LINE L1 1018 1150 -5259 3 1379 1092 118 0 0 chrX 104184203 104184356 -62465940 + B2_Mm2 SINE B2 1 153 -42 3 1379 282 56 0 0 chrX 104184357 104184393 -62465903 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 3 1379 184 344 88 85 chrX 104184943 104185261 -62465035 + L2c LINE L2 3069 3387 0 3 1379 366 307 77 28 chrX 104185366 104185561 -62464735 - L2c LINE L2 -303 3084 2882 3 1379 27 29 0 0 chrX 104186464 104186498 -62463798 + AT_rich Low_complexity Low_complexity 1 34 0 3 1379 378 0 0 0 chrX 104186822 104186864 -62463432 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1379 3121 314 101 18 chrX 104186870 104189227 -62461069 - L1MA6 LINE L1 -363 6639 4041 3 1379 307 288 72 0 chrX 104189225 104189364 -62460932 - L1MA6 LINE L1 -4319 2530 2382 3 1379 310 289 62 48 chrX 104190612 104190667 -62459629 + L1_Mur1 LINE L1 1351 1404 -2510 3 1379 1668 16 0 0 chrX 104190667 104190855 -62459441 + B2_Mm1a SINE B2 1 188 -5 3 1379 386 285 52 37 chrX 104190855 104191201 -62459095 + L1_Mur1 LINE L1 1405 1761 -4119 3 1379 571 370 132 41 chrX 104191308 104192109 -62458187 + L1MCc LINE L1 143 1016 -5407 3 1379 21 0 0 0 chrX 104192575 104192596 -62457700 + AT_rich Low_complexity Low_complexity 1 21 0 3 1379 306 132 0 0 chrX 104192924 104192977 -62457319 + (TAG)n Simple_repeat Simple_repeat 1 53 0 3 1379 258 160 0 0 chrX 104192992 104193042 -62457254 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 1379 231 36 0 0 chrX 104193059 104193087 -62457209 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1379 438 322 92 11 chrX 104193321 104193506 -62456790 - L1M2 LINE L1 -878 5265 5066 3 1379 588 319 0 13 chrX 104193516 104193675 -62456621 + MTEb LTR MaLR 20 176 -203 3 1379 645 270 127 0 chrX 104193769 104193958 -62456338 + MTEb LTR MaLR 167 379 0 3 1379 622 324 108 16 chrX 104193980 104194191 -62456105 - L1M2 LINE L1 -1100 5043 4800 3 1379 387 0 0 0 chrX 104194191 104194234 -62456062 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 3 1379 1172 55 0 0 chrX 104194237 104194383 -62455913 - B1_Mus2 SINE Alu -1 146 1 3 1379 622 324 108 16 chrX 104194383 104194547 -62455749 - L1M2 LINE L1 -1344 4799 4632 3 1379 216 292 113 139 chrX 104194572 104194723 -62455573 - B4A SINE B4 -144 148 2 3 1379 367 233 11 0 chrX 104194724 104194814 -62455482 - L1M2 LINE L1 -1491 4652 4562 3 1379 906 170 35 60 chrX 104194855 104195055 -62455241 - B2_Mm2 SINE B2 0 195 1 3 1379 441 336 143 0 chrX 104195151 104195361 -62454935 - Lx8 LINE L1 -1028 6445 6206 3 1379 23 54 0 0 chrX 104195501 104195538 -62454758 + AT_rich Low_complexity Low_complexity 1 37 0 3 1379 1022 311 124 51 chrX 104196279 104196313 -62453983 - Lx8 LINE L1 -195 7278 7245 3 1379 1047 149 71 71 chrX 104196313 104196403 -62453893 + URR1B DNA MER1_type 2 101 -124 3 1379 419 0 20 0 chrX 104196403 104196454 -62453842 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 3 1379 1064 86 0 14 chrX 104196454 104196595 -62453701 - B1_Mus2 SINE Alu -8 139 1 3 1379 1047 149 71 71 chrX 104196595 104196727 -62453569 + URR1B DNA MER1_type 102 224 -1 3 1379 1022 311 124 51 chrX 104196727 104197281 -62453015 - Lx8 LINE L1 -229 7244 6647 3 1379 2436 21 0 0 chrX 104197605 104197884 -62452412 + L1Md_A LINE L1 5308 5586 -297 3 1379 8501 28 0 0 chrX 104197884 104198877 -62451419 + L1Md_A LINE L1 5587 6579 -3 3 1379 786 308 100 8 chrX 104198899 104199138 -62451158 + B4 SINE B4 1 261 -31 3 1379 25 31 0 0 chrX 104200682 104200714 -62449582 + AT_rich Low_complexity Low_complexity 1 32 0 3 172 4291 69 0 7 chrX 104201942 104202512 -62447784 - L1Md_F2 LINE L1 -12 6570 6005 3 1380 220 355 156 0 chrX 104202792 104202933 -62447363 - L2 LINE L2 -721 2698 2536 3 1380 337 396 63 19 chrX 104203182 104203388 -62446908 + Charlie15a DNA MER1_type 10 224 0 3 1380 314 236 124 85 chrX 104205115 104205268 -62445028 - L1MA10 LINE L1 -10 6324 6166 3 1380 397 354 35 31 chrX 104205292 104205519 -62444777 - MIR SINE MIR -9 259 30 3 1380 25 31 0 0 chrX 104205668 104205700 -62444596 + AT_rich Low_complexity Low_complexity 1 32 0 3 1380 210 333 56 0 chrX 104206053 104206125 -62444171 + L2b LINE L2 3291 3366 -9 3 1380 289 305 0 0 chrX 104206111 104206170 -62444126 - L2b LINE L2 -15 3360 3302 3 1380 272 283 96 17 chrX 104206344 104206459 -62443837 - L2a LINE L2 0 3426 3303 3 1380 612 268 77 12 chrX 104207135 104207305 -62442991 + MIR3 SINE MIR 22 202 -6 3 1380 217 323 137 29 chrX 104207472 104207574 -62442722 + MamSINE1 SINE tRNA 26 138 -152 3 1380 21 36 0 0 chrX 104208014 104208042 -62442254 + AT_rich Low_complexity Low_complexity 1 28 0 3 1380 291 312 0 0 chrX 104208541 104208621 -62441675 + MIRb SINE MIR 63 142 -126 3 1380 295 328 57 8 chrX 104208967 104209090 -62441206 - MIRb SINE MIR -119 149 21 3 1380 186 43 0 0 chrX 104210508 104210531 -62439765 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 1380 948 150 203 0 chrX 104211843 104211876 -62438420 + URR1A DNA MER1_type 1 33 -193 3 1380 234 0 0 0 chrX 104211876 104211902 -62438394 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 1380 948 150 203 0 chrX 104211902 104212055 -62438241 + URR1A DNA MER1_type 34 224 -2 3 1380 267 228 42 0 chrX 104212692 104212803 -62437493 - L1M LINE L1 -774 5410 5294 3 1380 789 215 0 13 chrX 104212984 104213135 -62437161 - B1_Mur4 SINE Alu -1 149 1 3 1380 1266 27 0 0 chrX 104213531 104213678 -62436618 - B1_Mm SINE Alu 0 147 1 3 1380 6860 119 12 2 chrX 104213864 104215611 -62434685 + Lx3A LINE L1 3 2230 -3656 3 1380 17966 94 24 6 chrX 104215608 104219218 -62431078 + Lx3A LINE L1 3308 6976 -5 3 1380 21 36 0 0 chrX 104219219 104219247 -62431049 + AT_rich Low_complexity Low_complexity 1 28 0 3 1380 3134 233 133 99 chrX 104219818 104221341 -62428955 + RMER1A Other Other 9 1027 -3 3 1380 1136 261 148 25 chrX 104221413 104221817 -62428479 + Lx8 LINE L1 6854 7307 -166 3 1380 550 289 73 30 chrX 104222149 104222469 -62427827 - L1M3e LINE L1 -6649 381 40 3 1380 279 0 0 0 chrX 104222642 104222673 -62427623 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1380 305 138 0 30 chrX 104222677 104222744 -62427552 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 3 1380 443 403 0 0 chrX 104222754 104222893 -62427403 - RSINE1 SINE B4 -25 140 2 3 1380 330 333 65 56 chrX 104224232 104224356 -62425940 - MTEa LTR MaLR -138 241 8 3 1380 381 287 19 0 chrX 104224356 104224464 -62425832 - MLT2B3 LTR ERVL -437 117 8 3 1380 1448 101 91 57 chrX 104224465 104224728 -62425568 + Lx LINE L1 6383 6654 0 3 1380 6819 122 85 1 chrX 104224755 104225861 -62424435 + Lx4A LINE L1 5860 7058 0 3 1380 24 0 0 0 chrX 104225861 104225885 -62424411 + AT_rich Low_complexity Low_complexity 1 24 0 3 1380 601 254 22 40 chrX 104227589 104227815 -62422481 - Lx9 LINE L1 -15 7629 7408 3 1380 231 53 0 0 chrX 104227878 104227916 -62422380 - L1_Mus2 LINE L1 -2 6564 6527 3 1380 651 77 0 0 chrX 104228535 104228639 -62421657 + L1_Mus3 LINE L1 6535 6638 0 3 1380 1015 160 10 25 chrX 104229085 104229284 -62421012 + L1_Mur2 LINE L1 5109 5304 -573 3 1380 2120 72 0 43 chrX 104229267 104229526 -62420770 + L1_Mus2 LINE L1 6277 6531 -35 3 1380 2627 75 0 6 chrX 104229526 104229872 -62420424 + L1_Mus1 LINE L1 6223 6566 -1 3 1380 2120 72 0 43 chrX 104229872 104229915 -62420381 + L1_Mus2 LINE L1 6532 6566 0 3 1380 3483 194 87 6 chrX 104229907 104231019 -62419277 + Lx5 LINE L1 5267 6729 -731 3 1380 306 148 0 0 chrX 104231218 104231272 -62419024 + (CAGA)n Simple_repeat Simple_repeat 3 56 0 3 1380 1843 280 26 8 chrX 104231534 104232041 -62418255 - Lx7 LINE L1 -377 7319 6804 3 1380 226 346 40 15 chrX 104232079 104232181 -62418115 - MIRm SINE MIR -92 170 70 3 1380 711 328 29 25 chrX 104232854 104233072 -62417224 + B4A SINE B4 3 219 -73 3 1380 675 46 0 0 chrX 104233072 104233159 -62417137 + (GA)n Simple_repeat Simple_repeat 2 88 0 3 1380 711 328 29 25 chrX 104233159 104233178 -62417118 + B4A SINE B4 220 240 -52 3 1380 971 224 20 0 chrX 104233632 104233828 -62416468 - B3 SINE B2 -7 209 10 3 1380 325 309 0 21 chrX 104235082 104235178 -62415118 - MIRb SINE MIR -55 213 120 3 1380 396 0 0 0 chrX 104235619 104235663 -62414633 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1380 219 69 0 0 chrX 104236305 104236334 -62413962 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1380 503 251 14 69 chrX 104236519 104236703 -62413593 + L1MB1 LINE L1 5659 5841 -603 3 1380 445 331 81 0 chrX 104236788 104237036 -62413260 + L1MA9 LINE L1 5842 6109 -203 3 1380 4019 149 48 7 chrX 104237048 104237749 -62412547 + ORR1B2-int LTR MaLR 791 1507 -2 3 1380 1690 176 129 6 chrX 104237753 104238078 -62412218 + ORR1B2 LTR MaLR 3 367 0 3 1380 407 276 12 88 chrX 104238302 104238473 -62411823 - Lx9 LINE L1 -1672 5972 5815 3 1380 3631 55 9 0 chrX 104239020 104239475 -62410821 - L1_Mus1 LINE L1 0 6567 6109 3 1380 428 281 69 23 chrX 104239712 104239887 -62410409 - Lx6 LINE L1 0 7460 7278 3 1380 351 273 24 47 chrX 104239945 104240072 -62410224 - L1MA6 LINE L1 -9 6291 6168 3 1380 780 134 20 7 chrX 104240092 104240242 -62410054 - Lx3A LINE L1 -3 6978 6827 3 1380 484 305 78 34 chrX 104240445 104240740 -62409556 - L1M2a LINE L1 -2921 4243 3936 3 1380 1068 104 0 0 chrX 104240744 104240888 -62409408 - B1_Mus1 SINE Alu 0 148 5 3 1380 976 279 78 54 chrX 104240898 104241361 -62408935 - Lx8 LINE L1 0 7473 7000 3 1380 180 0 0 0 chrX 104241361 104241381 -62408915 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1380 288 0 0 0 chrX 104241564 104241596 -62408700 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 1380 396 0 0 0 chrX 104241596 104241639 -62408657 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1380 241 271 71 50 chrX 104241667 104241807 -62408489 - L1MC5 LINE L1 -95 7866 7724 3 1380 279 275 209 0 chrX 104242045 104242136 -62408160 + PB1D10 SINE Alu 2 111 -6 3 1380 315 0 0 0 chrX 104242754 104242789 -62407507 + (T)n Simple_repeat Simple_repeat 1 35 0 3 1380 32476 30 0 0 chrX 104242822 104247461 -62402835 - L1Md_T LINE L1 0 6582 1943 4 1380 35231 35 0 0 chrX 104247458 104252881 -62397415 - L1Md_Gf LINE L1 -318 5568 49 4 1380 631 291 41 37 chrX 104252878 104253036 -62397260 - Lx8 LINE L1 -454 7019 6855 3 1380 622 71 9 9 chrX 104253036 104253149 -62397147 + L1_Mus3 LINE L1 6526 6638 0 4 1380 631 291 41 37 chrX 104253149 104253208 -62397088 - Lx8 LINE L1 -619 6854 6801 3 1380 601 274 196 18 chrX 104253220 104253617 -62396679 - L1M2a LINE L1 -3231 3933 3466 3 1380 22 35 0 0 chrX 104253658 104253687 -62396609 + AT_rich Low_complexity Low_complexity 1 29 0 4 1380 558 346 5 14 chrX 104253738 104253952 -62396344 - Lx8 LINE L1 -132 7341 7130 4 1380 951 201 45 22 chrX 104253951 104253991 -62396305 + L1_Mur3 LINE L1 3759 3798 -2082 4 1380 387 0 0 0 chrX 104253991 104254034 -62396262 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1380 951 201 45 22 chrX 104254034 104254217 -62396079 + L1_Mur3 LINE L1 3799 3986 -1894 4 1380 236 215 0 0 chrX 104254225 104254290 -62396006 - L1M2a LINE L1 -4024 3144 3080 3 1380 198 0 0 0 chrX 104254806 104254828 -62395468 + (TTA)n Simple_repeat Simple_repeat 2 23 0 4 1380 19369 14 0 0 chrX 104254877 104257794 -62392502 - L1Md_A LINE L1 -1 6581 3664 4 1380 1570 351 106 19 chrX 104257877 104258975 -62391321 - L1M2a LINE L1 -4985 2183 991 3 1380 3358 72 0 2 chrX 104259009 104259442 -62390854 - L1_Mus4 LINE L1 -517 6119 5687 4 1380 3123 138 34 6 chrX 104259442 104259966 -62390330 + Lx LINE L1 6108 6646 -8 4 1380 270 439 16 11 chrX 104259991 104260173 -62390123 - L1M2a LINE L1 -6211 957 775 3 1380 664 25 0 0 chrX 104260213 104260293 -62390003 - L1_Mm LINE L1 -655 5228 5149 4 1380 1151 55 0 12 chrX 104260293 104260458 -62389838 + L1Md_F3 LINE L1 6422 6584 0 4 1380 1373 163 37 0 chrX 104260548 104260794 -62389502 - Lx3B LINE L1 -3 6970 6716 4 1380 2076 139 20 0 chrX 104260794 104261139 -62389157 + Lx3B LINE L1 5766 6117 -856 4 1380 237 293 0 0 chrX 104261128 104261186 -62389110 - L1MA7 LINE L1 -38 6253 6196 4 1380 566 295 93 110 chrX 104261229 104261519 -62388777 - B4A SINE B4 -6 286 2 4 1380 579 317 72 0 chrX 104261520 104261839 -62388457 - L1MA7 LINE L1 -520 5780 5439 4 1380 516 78 0 0 chrX 104262192 104262269 -62388027 + L1_Mus2 LINE L1 6489 6565 -1 4 1380 278 237 137 50 chrX 104262605 104262867 -62387429 - L1M4 LINE L1 -5231 2103 1827 4 1380 263 316 110 14 chrX 104262899 104263117 -62387179 - Lx9 LINE L1 -7 7637 7399 4 1380 7355 81 4 2 chrX 104263188 104264311 -62385985 + L1_Mus1 LINE L1 5443 6567 0 4 1380 1143 62 0 0 chrX 104264459 104264605 -62385691 + B1_Mus1 SINE Alu 2 147 -1 4 1380 8017 128 35 16 chrX 104264642 104265948 -62384348 - Lx3A LINE L1 -28 6953 5624 4 1380 4201 102 0 3 chrX 104265946 104266538 -62383758 + Lx3A LINE L1 5043 5632 -254 4 1380 4794 248 60 45 chrX 104266820 104267311 -62382985 - L1_Mur3 LINE L1 -2758 3122 2631 4 1380 459 0 0 0 chrX 104267311 104267362 -62382934 + (GA)n Simple_repeat Simple_repeat 2 52 0 4 1380 4794 248 60 45 chrX 104267362 104268619 -62381677 - L1_Mur3 LINE L1 -3250 2630 1348 4 1380 1077 102 0 0 chrX 104268657 104268804 -62381492 - B1_Mus1 SINE Alu 0 148 2 4 1380 634 271 0 117 chrX 104268805 104268942 -62381354 - L1_Mur3 LINE L1 -4493 1387 1265 4 1380 1396 84 16 10 chrX 104268942 104269135 -62381161 - B2_Mm2 SINE B2 0 195 2 4 1380 634 321 65 81 chrX 104269135 104269517 -62380779 - L1_Mur3 LINE L1 -6460 1268 881 4 1380 801 162 22 7 chrX 104269517 104269654 -62380642 - B1_Mur2 SINE Alu -8 141 3 4 1380 634 321 65 81 chrX 104269654 104269818 -62380478 - L1_Mur3 LINE L1 -6848 880 717 4 1380 242 284 48 29 chrX 104270125 104270230 -62380066 - MLT1A1 LTR MaLR 0 408 302 4 1380 314 279 89 18 chrX 104270472 104270640 -62379656 + Charlie1a DNA MER1_type 804 983 -472 4 1380 43 85 0 0 chrX 104270661 104270767 -62379529 + AT_rich Low_complexity Low_complexity 1 106 0 4 1380 384 216 243 0 chrX 104271276 104271387 -62378909 - B1_Mur4 SINE Alu -1 149 12 4 1380 23 68 0 0 chrX 104271407 104271451 -62378845 + AT_rich Low_complexity Low_complexity 1 44 0 4 1380 1087 151 22 0 chrX 104271699 104271884 -62378412 + B2_Mm2 SINE B2 1 189 -6 4 1380 32905 76 2 16 chrX 104271892 104277094 -62373202 + L1Md_F2 LINE L1 462 5586 -297 4 1380 8101 46 0 1 chrX 104277094 104278080 -62372216 + L1Md_F2 LINE L1 5587 6571 -11 4 1380 5919 41 1 18 chrX 104278282 104279021 -62371275 + L1Md_F2 LINE L1 5856 6582 0 4 1380 1652 130 4 0 chrX 104279103 104279342 -62370954 - Lx3C LINE L1 -177 6799 6560 4 1380 606 145 165 30 chrX 104279335 104279499 -62370797 + Lx3C LINE L1 6789 6974 -2 4 1380 876 127 6 14 chrX 104280107 104280280 -62370016 - L1_Mus4 LINE L1 -460 6176 6065 4 1380 2917 81 19 2 chrX 104280280 104280700 -62369596 + L1_Mus4 LINE L1 6197 6623 -13 4 1380 1968 51 0 45 chrX 104280825 104281093 -62369203 + L1_Mus2 LINE L1 6310 6565 -1 4 1380 278 250 27 68 chrX 104281475 104281621 -62368675 + Lx9 LINE L1 7498 7637 -7 4 1380 379 339 63 46 chrX 104283126 104283410 -62366886 - MamRep605 Unknown Unknown -132 744 456 4 1380 188 321 136 48 chrX 104284140 104284287 -62366009 - L2c LINE L2 -56 3331 3172 4 1380 217 320 129 16 chrX 104285285 104285409 -62364887 - MIR3 SINE MIR -18 190 53 4 1380 195 349 16 0 chrX 104286997 104287060 -62363236 - MIR3 SINE MIR -20 188 125 4 1380 22 35 0 0 chrX 104288584 104288613 -62361683 + AT_rich Low_complexity Low_complexity 1 29 0 4 1380 648 292 45 6 chrX 104289350 104289529 -62360767 - B3 SINE B2 -28 188 3 4 1380 999 88 0 7 chrX 104290548 104290685 -62359611 - B1_Mus1 SINE Alu -8 140 5 4 1380 237 352 115 0 chrX 104292124 104292246 -62358050 - ORR1E LTR MaLR -214 145 10 4 1380 967 205 104 149 chrX 104292369 104292771 -62357525 + ORR1C2 LTR MaLR 1 384 0 4 1380 30 27 0 0 chrX 104292848 104292885 -62357411 + AT_rich Low_complexity Low_complexity 1 37 0 4 1380 683 78 0 10 chrX 104293318 104293422 -62356874 + (TTCC)n Simple_repeat Simple_repeat 3 105 0 4 1380 311 215 65 0 chrX 104293668 104293761 -62356535 - L1M2 LINE L1 -3300 2843 2745 4 1380 22 56 0 0 chrX 104293860 104293896 -62356400 + AT_rich Low_complexity Low_complexity 1 36 0 4 1380 210 80 60 0 chrX 104294104 104294154 -62356142 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 4 1380 953 45 0 43 chrX 104294639 104294777 -62355519 + B1_Mus2 SINE Alu 16 147 0 4 1380 345 264 0 42 chrX 104294986 104295081 -62355215 + PB1D10 SINE Alu 27 117 0 4 1380 2160 117 33 0 chrX 104295219 104295587 -62354709 - MusHAL1 LINE L1 -1789 923 544 4 1380 4669 204 110 45 chrX 104295973 104297223 -62353073 - Lx9 LINE L1 -7 7637 6306 4 1380 3527 75 12 8 chrX 104300462 104300943 -62349353 + L1_Mus1 LINE L1 6085 6567 0 4 1380 1118 82 0 6 chrX 104301659 104301819 -62348477 + (TTCTCC)n Simple_repeat Simple_repeat 5 163 0 4 1380 1120 70 14 0 chrX 104301835 104301978 -62348318 - B1_Mus2 SINE Alu 0 147 3 4 1380 7286 57 0 1 chrX 104302187 104303103 -62347193 + L1Md_F2 LINE L1 4672 5586 -297 4 1380 7975 46 1 13 chrX 104303104 104304111 -62346185 + L1Md_F2 LINE L1 5588 6582 0 4 1380 6399 52 0 0 chrX 104304120 104304905 -62345391 + L1Md_F2 LINE L1 5784 6568 -14 4 1380 465 282 7 64 chrX 104305547 104305687 -62344609 - B1_Mur2 SINE Alu -1 148 17 4 1380 1989 71 0 0 chrX 104305729 104305981 -62344315 - L1_Mus1 LINE L1 0 6567 6316 4 1380 240 35 0 0 chrX 104306092 104306121 -62344175 + (CAAAC)n Simple_repeat Simple_repeat 1 29 0 4 1380 4126 220 42 29 chrX 104306354 104307695 -62342601 + RMER1A Other Other 1 1030 0 4 1380 4731 80 3 0 chrX 104307714 104308341 -62341955 + L1_Mus3 LINE L1 5595 6223 -415 4 1380 1274 189 45 90 chrX 104308531 104308885 -62341411 - Lx7 LINE L1 0 7696 7359 4 1380 30 27 0 0 chrX 104308893 104308930 -62341366 + AT_rich Low_complexity Low_complexity 1 37 0 4 1380 1336 253 20 20 chrX 104308954 104309256 -62341040 - Lx5 LINE L1 -7 7043 6742 4 1380 3021 217 95 0 chrX 104309282 104309965 -62340331 - Lx9 LINE L1 -181 7463 6716 4 1380 24 32 0 0 chrX 104309967 104309998 -62340298 + AT_rich Low_complexity Low_complexity 1 31 0 4 1380 230 326 43 36 chrX 104310299 104310439 -62339857 + B1F1 SINE Alu 1 141 -8 4 1380 347 277 10 29 chrX 104310512 104310616 -62339680 - Lx6 LINE L1 -412 7048 6947 4 1380 280 325 35 110 chrX 104311979 104312152 -62338144 + MIRb SINE MIR 36 195 -73 4 1380 225 246 14 14 chrX 104312663 104312733 -62337563 + L1M5 LINE L1 5577 5646 -478 4 1380 694 299 6 13 chrX 104312793 104312949 -62337347 + RSINE1 SINE B4 11 165 0 4 1380 4277 63 6 0 chrX 104313839 104314377 -62335919 + L1_Mus1 LINE L1 6027 6567 0 4 1380 1961 120 24 40 chrX 104314708 104315037 -62335259 - ORR1A2 LTR MaLR -3 324 1 4 1380 5849 125 25 2 chrX 104315037 104315938 -62334358 - ORR1A2-int LTR MaLR 0 1963 1042 4 1380 990 87 0 0 chrX 104315939 104316077 -62334219 + (TTC)n Simple_repeat Simple_repeat 3 140 0 4 1380 1319 61 0 16 chrX 104316099 104316282 -62334014 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 4 1380 1265 78 0 6 chrX 104316294 104316324 -62333972 + (TTC)n Simple_repeat Simple_repeat 1 30 0 4 1380 1263 94 0 0 chrX 104316324 104316504 -62333792 + (TCC)n Simple_repeat Simple_repeat 1 180 0 4 1380 1265 78 0 6 chrX 104316504 104316653 -62333643 + (TTC)n Simple_repeat Simple_repeat 2 150 0 4 1380 1252 77 18 0 chrX 104316653 104316821 -62333475 + Lx2 LINE L1 5598 5768 -1229 4 1380 815 221 50 34 chrX 104316830 104316887 -62333409 - ORR1A2-int LTR MaLR -887 905 855 4 1380 3349 39 10 0 chrX 104316887 104317297 -62332999 - L1Md_F3 LINE L1 -14 6570 6157 4 1380 1044 206 75 7 chrX 104317297 104317589 -62332707 - ORR1A2-int LTR MaLR -939 1024 713 4 1380 365 197 0 174 chrX 104317542 104317634 -62332662 - MT2B LTR ERVL -314 287 212 4 1380 515 118 12 0 chrX 104317758 104317843 -62332453 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 4 1380 350 377 65 39 chrX 104317860 104318089 -62332207 - MLT2B2 LTR ERVL -69 446 212 4 1380 1791 269 114 35 chrX 104318929 104319394 -62330902 + L1_Rod LINE L1 2391 2887 -2960 4 1380 396 0 0 0 chrX 104319394 104319438 -62330858 + (TAA)n Simple_repeat Simple_repeat 2 45 0 4 1380 1791 269 114 35 chrX 104319438 104320087 -62330209 + L1_Rod LINE L1 2888 3593 -2254 4 1380 287 328 44 17 chrX 104320256 104320436 -62329860 + L1MA4A LINE L1 4849 5033 -1107 4 1380 2169 174 15 15 chrX 104320607 104321009 -62329287 - Lx4A LINE L1 -1 7057 6656 4 1380 7122 29 2 0 chrX 104321006 104321839 -62328457 + L1Md_A LINE L1 5747 6581 -1 4 1380 576 96 0 0 chrX 104321840 104321934 -62328362 + L1VL4 LINE L1 741 834 -5468 4 1380 5818 96 1 1 chrX 104321932 104322733 -62327563 - L1_Mus2 LINE L1 -101 5782 4982 4 1380 5697 82 2 16 chrX 104322733 104323519 -62326777 + L1_Mus2 LINE L1 5792 6566 0 4 1380 207 0 0 0 chrX 104323553 104323576 -62326720 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1380 10920 109 8 5 chrX 104323694 104325438 -62324858 + MusHAL1 LINE L1 614 2362 -991 4 1380 10352 108 7 4 chrX 104325437 104327762 -62322534 + L1_Mus3 LINE L1 4299 6631 -7 4 1380 7945 152 25 41 chrX 104327766 104328508 -62321788 - L1_Mur2 LINE L1 -205 5672 4927 5 1380 441 0 0 0 chrX 104328508 104328557 -62321739 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 1380 7945 152 25 41 chrX 104328557 104328756 -62321540 - L1_Mur2 LINE L1 -951 4926 4726 5 1380 1098 83 0 7 chrX 104328756 104328902 -62321394 + B1_Mus2 SINE Alu 2 146 -1 5 1380 7945 152 25 41 chrX 104328902 104329501 -62320795 - L1_Mur2 LINE L1 -1152 4725 4156 5 1380 29 0 0 0 chrX 104329550 104329579 -62320717 + AT_rich Low_complexity Low_complexity 1 29 0 5 1380 453 319 47 34 chrX 104329697 104330024 -62320272 + L1MB1 LINE L1 5719 6053 -259 5 1380 593 304 67 12 chrX 104330051 104330304 -62319992 + L1MA4A LINE L1 5463 5729 -583 4 1380 1333 279 36 0 chrX 104330306 104330673 -62319623 - MTE2b LTR MaLR 0 370 3 5 1380 318 279 143 12 chrX 104330674 104330861 -62319435 + L1MA4A LINE L1 5693 5935 -368 4 1380 36 53 0 0 chrX 104331067 104331124 -62319172 + AT_rich Low_complexity Low_complexity 1 57 0 5 1380 343 326 106 0 chrX 104331267 104331408 -62318888 - RSINE1 SINE B4 -6 159 4 5 1380 1124 75 0 0 chrX 104332626 104332773 -62317523 + B1_Mus1 SINE Alu 2 148 0 5 1380 198 0 0 0 chrX 104332773 104332795 -62317501 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1381 550 75 43 11 chrX 104333798 104333892 -62316404 + Lx LINE L1 6558 6654 0 5 1381 25 31 0 0 chrX 104333989 104334021 -62316275 + AT_rich Low_complexity Low_complexity 1 32 0 5 1381 385 280 150 14 chrX 104334042 104334328 -62315968 - Lx9 LINE L1 -22 7622 7298 5 1381 26 64 0 0 chrX 104334564 104334611 -62315685 + AT_rich Low_complexity Low_complexity 1 47 0 5 1381 205 51 51 0 chrX 104334855 104334894 -62315402 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 5 1381 731 296 77 0 chrX 104335172 104335368 -62314928 - B4 SINE B4 -80 212 2 5 1381 1597 27 11 0 chrX 104335748 104335934 -62314362 - B2_Mm1a SINE B2 -5 188 1 5 1381 512 321 22 0 chrX 104335967 104336101 -62314195 - B3 SINE B2 -8 208 72 5 1381 685 275 27 138 chrX 104337138 104337373 -62312923 - L1M2 LINE L1 -1278 4865 4666 5 1381 333 0 0 0 chrX 104337373 104337410 -62312886 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 1381 685 275 27 138 chrX 104337410 104337622 -62312674 - L1M2 LINE L1 -1478 4665 4468 5 1381 915 271 104 3 chrX 104337631 104337949 -62312347 + Lx7 LINE L1 4710 5059 -821 5 1381 297 214 0 14 chrX 104337982 104338053 -62312243 - Lx6 LINE L1 -25 7435 7366 5 1381 419 130 0 32 chrX 104338063 104338158 -62312138 - L1Md_F2 LINE L1 -1 6581 6490 5 1381 624 304 11 0 chrX 104338177 104338361 -62311935 + Lx7 LINE L1 5093 5278 -602 5 1381 411 296 6 38 chrX 104338338 104338496 -62311800 + Lx9 LINE L1 5822 5974 -1670 5 1381 2382 279 87 32 chrX 104338510 104339528 -62310768 + Lx7 LINE L1 5301 6368 -1328 5 1381 3358 30 5 0 chrX 104339528 104339922 -62310374 - MTA_Mm LTR MaLR 0 396 1 5 1381 2382 316 85 50 chrX 104339922 104340641 -62309655 + Lx7 LINE L1 6369 7110 -586 5 1381 450 0 0 0 chrX 104340750 104340800 -62309496 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 5 1381 255 224 0 0 chrX 104340953 104341011 -62309285 - L1_Rod LINE L1 -138 5709 5652 5 1381 1294 297 74 31 chrX 104341060 104341459 -62308837 + Lx8 LINE L1 5753 6198 -1275 5 1381 369 0 0 0 chrX 104341459 104341500 -62308796 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1381 1294 309 92 31 chrX 104341500 104341873 -62308423 + Lx8 LINE L1 6199 6576 -897 5 1381 513 114 19 19 chrX 104341968 104342075 -62308221 - L1_Mus4 LINE L1 -1 6653 6547 5 1381 4857 94 7 24 chrX 104342079 104342949 -62307347 - L1_Mus4 LINE L1 -371 6265 5410 5 1381 508 339 25 74 chrX 104342949 104343191 -62307105 + MTE-int LTR MaLR 145 374 -1206 5 1381 611 262 22 84 chrX 104343215 104343394 -62306902 + MTE2b LTR MaLR 212 379 0 5 1381 1369 283 80 39 chrX 104347499 104347639 -62302657 - L1MA7 LINE L1 -116 6175 6034 5 1381 579 199 94 14 chrX 104347639 104347777 -62302519 - B1_Mur3 SINE Alu 0 149 1 5 1381 1369 283 80 39 chrX 104347777 104348272 -62302024 - L1MA7 LINE L1 -258 6033 5514 5 1381 2243 109 3 0 chrX 104348515 104348845 -62301451 - Lx2 LINE L1 -1 6996 6666 5 1381 635 329 105 46 chrX 104349011 104349894 -62300402 - L1MD2 LINE L1 -12 6347 5413 5 1381 239 234 0 0 chrX 104349908 104349955 -62300341 + CT-rich Low_complexity Low_complexity 2 48 0 5 1381 465 50 0 0 chrX 104349955 104350015 -62300281 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 1381 568 70 11 11 chrX 104350108 104350195 -62300101 + (TA)n Simple_repeat Simple_repeat 1 87 0 5 1381 639 71 0 0 chrX 104350253 104350338 -62299958 + (TCCC)n Simple_repeat Simple_repeat 2 86 0 5 1381 420 20 0 0 chrX 104350338 104350386 -62299910 + (TTTC)n Simple_repeat Simple_repeat 1 49 0 5 1381 1012 82 0 0 chrX 104350386 104350521 -62299775 - B1_Mus2 SINE Alu -12 135 1 5 1381 277 308 117 69 chrX 104350764 104350958 -62299338 - L1M5 LINE L1 -1201 4945 4737 5 1381 415 273 68 8 chrX 104350958 104351091 -62299205 + B1F SINE Alu 1 141 -8 5 1381 402 21 0 0 chrX 104351094 104351141 -62299155 + (GAAA)n Simple_repeat Simple_repeat 1 47 0 5 1381 277 308 117 69 chrX 104351141 104351319 -62298977 - L1M5 LINE L1 -1410 4736 4553 5 1381 1487 223 114 5 chrX 104351319 104351697 -62298599 - MTD LTR MaLR 0 419 1 5 1381 228 269 92 44 chrX 104351774 104351980 -62298316 - Lx9 LINE L1 -40 7604 7389 5 1381 231 204 0 0 chrX 104352043 104352092 -62298204 - L1MC LINE L1 -1671 4475 4427 5 1381 665 196 25 50 chrX 104352176 104352337 -62297959 - Lx4A LINE L1 -9 7049 6893 5 1381 305 262 0 59 chrX 104352389 104352474 -62297822 - L1MC LINE L1 -1959 4187 4108 5 1381 308 300 25 2 chrX 104352542 104352701 -62297595 - L1MC LINE L1 -2212 3934 3763 5 1381 429 274 121 57 chrX 104352719 104353033 -62297263 - L1M4 LINE L1 -405 5779 5446 5 1381 443 336 81 45 chrX 104353121 104353430 -62296866 - ERVL-B4-int LTR ERVL -1770 3944 3625 5 1381 734 278 57 43 chrX 104354752 104355124 -62295172 - ERVL-B4-int LTR ERVL -5317 397 21 5 1381 1117 223 94 40 chrX 104356155 104356506 -62293790 + ORR1D2 LTR MaLR 1 370 0 5 1381 592 331 49 55 chrX 104356511 104357017 -62293279 + L1MA7 LINE L1 5514 6016 -284 5 1381 315 281 154 26 chrX 104357450 104357717 -62292579 - L1M4 LINE L1 -1308 4838 4538 5 1381 340 300 109 31 chrX 104357721 104358271 -62292025 - L1M4 LINE L1 -2566 3580 2988 5 1381 321 26 0 0 chrX 104358776 104358814 -62291482 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 5 1381 38 51 0 0 chrX 104360374 104360433 -62289863 + AT_rich Low_complexity Low_complexity 1 59 0 5 1381 7367 86 6 1 chrX 104360442 104361441 -62288855 - L1_Mus4 LINE L1 -2 6634 5631 5 1381 336 216 320 13 chrX 104361445 104361598 -62288698 - B3 SINE B2 -1 215 16 5 1381 325 239 0 14 chrX 104361900 104361972 -62288324 + MER5A DNA MER1_type 43 113 -76 5 1381 225 225 14 14 chrX 104362251 104362323 -62287973 + L1MA8 LINE L1 6154 6225 -66 5 1381 434 329 14 7 chrX 104362611 104362755 -62287541 - ID_B1 SINE B4 0 224 80 5 1381 21 0 0 0 chrX 104362799 104362820 -62287476 + AT_rich Low_complexity Low_complexity 1 21 0 5 1381 497 269 52 36 chrX 104365137 104365330 -62284966 + L3 LINE CR1 4103 4298 -191 5 1381 774 30 10 0 chrX 104367969 104368068 -62282228 + B1_Mm SINE Alu 48 147 0 5 1381 23 0 0 0 chrX 104368074 104368097 -62282199 + AT_rich Low_complexity Low_complexity 1 23 0 5 1381 669 272 98 11 chrX 104368873 104369148 -62281148 - L1MA4 LINE L1 -372 5928 5630 5 1381 522 79 0 0 chrX 104369430 104369506 -62280790 + (TC)n Simple_repeat Simple_repeat 1 76 0 5 1381 180 0 0 0 chrX 104369506 104369526 -62280770 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 1381 536 324 106 19 chrX 104369531 104369739 -62280557 - B4A SINE B4 -10 282 57 5 1381 248 208 103 13 chrX 104369785 104369863 -62280433 - Tigger15a DNA TcMar -160 555 471 5 1381 220 171 0 0 chrX 104369913 104369948 -62280348 + (TTG)n Simple_repeat Simple_repeat 1 35 0 5 1381 3216 80 8 29 chrX 104370835 104370918 -62279378 - L1_Mus2 LINE L1 -502 6064 5990 5 1381 2114 114 10 16 chrX 104370918 104371229 -62279067 - RLTR27 LTR ERVK 0 309 1 5 1381 7889 95 3 11 chrX 104371229 104372455 -62277841 - L1_Mus2 LINE L1 -577 5989 4766 5 1381 264 179 135 10 chrX 104372667 104372763 -62277533 - Lx9 LINE L1 -141 7503 7396 5 1381 366 290 30 22 chrX 104372929 104373063 -62277233 - Lx9 LINE L1 -226 7418 7284 5 1381 205 372 67 27 chrX 104373369 104373518 -62276778 + MIRb SINE MIR 53 207 -61 5 1381 683 238 58 35 chrX 104373773 104373947 -62276349 - B3 SINE B2 0 216 39 5 1381 240 308 80 32 chrX 104374109 104374261 -62276035 + MIRm SINE MIR 1 154 -54 5 1381 299 274 135 43 chrX 104374513 104374654 -62275642 + MLT2B1 LTR ERVL 401 554 -13 5 1381 652 315 62 85 chrX 104375027 104375048 -62275248 + MT2A LTR ERVL 133 153 -380 5 1381 603 0 0 0 chrX 104375048 104375115 -62275181 + (TATATG)n Simple_repeat Simple_repeat 4 70 0 5 1381 652 315 62 85 chrX 104375115 104375495 -62274801 + MT2A LTR ERVL 154 525 -8 5 1381 281 273 0 0 chrX 104375511 104375588 -62274708 - L1MB5 LINE L1 -1 6173 6097 5 1381 347 250 0 12 chrX 104375589 104375674 -62274622 - Tigger5 DNA MER2_type -13 2393 2310 5 1381 379 295 46 69 chrX 104375688 104375819 -62274477 - Tigger5 DNA MER2_type -2171 235 108 5 1381 586 256 159 8 chrX 104375903 104376167 -62274129 - L1MB5 LINE L1 -73 6101 5798 5 1381 975 314 63 3 chrX 104376176 104376508 -62273788 - Lx8 LINE L1 -260 7213 6862 5 1381 479 344 45 14 chrX 104376840 104377061 -62273235 - Lx8 LINE L1 -616 6857 6630 5 1381 1498 330 52 36 chrX 104377057 104377101 -62273195 + Lx8 LINE L1 5806 5852 -1621 5 1381 3044 23 0 0 chrX 104377101 104377447 -62272849 - ORR1A0 LTR MaLR 0 346 1 5 1381 1498 330 52 36 chrX 104377447 104378227 -62272069 + Lx8 LINE L1 5853 6643 -830 5 1381 545 293 27 6 chrX 104378219 104378460 -62271836 - L1M4c LINE L1 -1443 4939 4671 5 1381 692 278 68 0 chrX 104378466 104378657 -62271639 - ORR1D2 LTR MaLR 0 370 167 5 1381 30145 134 16 13 chrX 104378657 104384409 -62265887 + L1Md_F LINE L1 265 5841 -42 5 1381 8439 31 0 0 chrX 104384561 104385550 -62264746 - L1Md_T LINE L1 -1 6581 5593 5 1381 5403 82 4 1 chrX 104385550 104386287 -62264009 + L1_Mus2 LINE L1 5827 6565 -1 5 1381 192 179 0 0 chrX 104386296 104386335 -62263961 + A-rich Low_complexity Low_complexity 1 39 0 5 1381 344 289 14 34 chrX 104386469 104386616 -62263680 - L1M4c LINE L1 -2649 3733 3590 5 1381 279 0 0 0 chrX 104386646 104386677 -62263619 + (TC)n Simple_repeat Simple_repeat 2 32 0 5 1381 362 290 95 97 chrX 104386776 104387219 -62263077 - L1M4c LINE L1 -3993 2391 1950 5 1381 1201 256 43 45 chrX 104387587 104387984 -62262312 - Lx9 LINE L1 -171 7473 7078 5 1381 363 167 47 12 chrX 104387966 104388051 -62262245 - Lx9 LINE L1 -880 6764 6677 5 1381 396 0 0 0 chrX 104388173 104388217 -62262079 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1381 849 283 142 7 chrX 104388230 104388525 -62261771 + Lx9 LINE L1 6360 6694 -950 5 1381 738 233 0 0 chrX 104388988 104389168 -62261128 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 5 1381 357 287 0 0 chrX 104389413 104389535 -62260761 - L1MA5 LINE L1 -34 6266 6145 5 1381 1416 81 14 5 chrX 104389538 104389750 -62260546 + L1_Mus3 LINE L1 6424 6637 -1 5 1381 343 281 16 8 chrX 104390206 104390328 -62259968 + MER103 DNA DNA 33 155 -11 5 1381 1023 261 164 0 chrX 104390972 104391290 -62259006 + ORR1D2 LTR MaLR 1 370 0 6 1381 235 260 39 0 chrX 104391753 104391830 -62258466 + CT-rich Low_complexity Low_complexity 2 81 0 6 1381 480 224 19 9 chrX 104391838 104391946 -62258350 - PB1D9 SINE Alu -11 109 1 6 1381 575 358 27 43 chrX 104391982 104392350 -62257946 + Lx8 LINE L1 7053 7414 -59 6 1381 652 305 29 0 chrX 104392373 104392583 -62257713 + B3 SINE B2 1 216 0 6 1381 386 38 0 19 chrX 104392859 104392912 -62257384 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1381 5591 58 18 7 chrX 104393266 104394440 -62255856 - L1Md_F2 LINE L1 -246 6336 5147 6 1381 4032 148 18 13 chrX 104394434 104395305 -62254991 - L1Md_F LINE L1 -5608 1116 273 6 1381 12331 106 35 15 chrX 104395301 104396307 -62253989 - L1VL2 LINE L1 -567 3347 2463 6 1381 1077 134 21 0 chrX 104396307 104396501 -62253795 - L1_Mus3 LINE L1 0 6638 6441 6 1381 12331 128 34 14 chrX 104396501 104398534 -62251762 - L1VL2 LINE L1 -1452 2462 358 6 1381 1308 212 29 61 chrX 104398777 104399088 -62251208 - ORR1D1 LTR MaLR 0 374 74 6 1381 477 0 0 0 chrX 104399088 104399141 -62251155 + (TC)n Simple_repeat Simple_repeat 2 54 0 6 1381 297 0 0 0 chrX 104399141 104399173 -62251123 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1381 2562 306 29 47 chrX 104399194 104401472 -62248824 - Lx8 LINE L1 -207 7266 5001 6 1381 844 167 0 0 chrX 104401498 104401630 -62248666 - B1_Mus1 SINE Alu -12 136 5 6 1381 864 237 105 38 chrX 104401634 104401976 -62248320 - Lx8 LINE L1 -6341 1267 903 6 1381 652 296 0 7 chrX 104402796 104402942 -62247354 - RSINE1 SINE B4 -7 158 14 6 1381 260 180 126 52 chrX 104403429 104403564 -62246732 + Lx9 LINE L1 7480 7624 -20 6 1381 332 291 39 10 chrX 104403872 104403976 -62246320 - MTE-int LTR MaLR -1376 204 98 6 1381 740 182 10 2 chrX 104403981 104404114 -62246182 - B1_Mur3 SINE Alu -9 140 6 6 1381 361 136 45 0 chrX 104404105 104404171 -62246125 + MTE2b LTR MaLR 311 379 0 6 1381 295 305 31 21 chrX 104404292 104404389 -62245907 + B1F1 SINE Alu 11 108 -41 6 1381 27 0 0 0 chrX 104405008 104405035 -62245261 + AT_rich Low_complexity Low_complexity 1 27 0 6 1381 6303 165 15 30 chrX 104405109 104407599 -62242697 - Lx2 LINE L1 -17 6983 4601 6 1381 337 238 28 65 chrX 104407640 104407748 -62242548 + MTE2a LTR MaLR 276 379 0 6 1381 250 359 19 0 chrX 104407764 104407867 -62242429 + Lx8 LINE L1 6639 6743 -730 6 1381 329 325 0 0 chrX 104407881 104407964 -62242332 + Lx8 LINE L1 7246 7328 -145 6 1381 19127 72 4 6 chrX 104409236 104412634 -62237662 - L1Md_F2 LINE L1 -12 6570 3184 6 1381 379 252 113 104 chrX 104414721 104414951 -62235345 - Lx8 LINE L1 -9 7464 7233 6 1381 546 311 0 0 chrX 104415301 104415423 -62234873 + B1_Mur1 SINE Alu 27 148 -1 6 1381 706 299 21 26 chrX 104415438 104415630 -62234666 - B3A SINE B2 -6 192 2 6 1381 216 331 38 61 chrX 104416085 104416217 -62234079 - MIRc SINE MIR -10 252 124 6 1381 23 68 0 0 chrX 104417787 104417831 -62232465 + AT_rich Low_complexity Low_complexity 1 44 0 6 1381 537 407 66 84 chrX 104418066 104418121 -62232175 + L1M4b LINE L1 31 83 -7251 6 1381 3181 21 5 11 chrX 104418121 104418498 -62231798 + L1Md_F2 LINE L1 6206 6580 -2 6 1381 537 407 66 84 chrX 104418498 104419142 -62231154 + L1M4b LINE L1 84 717 -6617 6 1381 1133 245 119 24 chrX 104419174 104419509 -62230787 + MTE2b LTR MaLR 1 367 -12 6 1381 349 330 62 62 chrX 104420133 104420359 -62229937 + L1M4b LINE L1 1205 1430 -5904 6 1381 764 256 0 37 chrX 104420404 104420591 -62229705 + B3A SINE B2 1 180 -18 6 1381 289 188 14 0 chrX 104420851 104420920 -62229376 + Lx2B LINE L1 6930 6999 -1 6 1381 495 331 144 25 chrX 104420937 104421427 -62228869 + L1M4b LINE L1 1876 2478 -4624 6 1381 1685 223 25 52 chrX 104421432 104421551 -62228745 - L1_Rod LINE L1 -455 5392 5278 6 1381 1968 176 107 5 chrX 104421551 104421777 -62228519 - MTC LTR MaLR 0 421 190 6 1381 405 0 0 0 chrX 104421777 104421822 -62228474 + (AATAG)n Simple_repeat Simple_repeat 3 47 0 6 1381 1968 176 107 5 chrX 104421822 104421977 -62228319 - MTC LTR MaLR -232 189 2 6 1381 1685 223 25 52 chrX 104421977 104422414 -62227882 - L1_Rod LINE L1 -570 5277 4851 6 1381 364 233 35 0 chrX 104422439 104422555 -62227741 + L1MA6 LINE L1 5318 5437 -863 6 1381 2558 187 22 20 chrX 104422607 104423163 -62227133 - L1_Mur2 LINE L1 -22 5858 5302 6 1381 4806 66 2 0 chrX 104423175 104423813 -62226483 - L1_Mus1 LINE L1 0 5883 5245 6 1381 4830 87 3 15 chrX 104423813 104424481 -62225815 + L1_Mus1 LINE L1 5902 6561 -6 6 1381 248 233 0 0 chrX 104424506 104424579 -62225717 - L1_Mur2 LINE L1 -564 5316 5244 6 1381 1678 185 125 68 chrX 104424579 104424979 -62225317 - RLTR31A_Mm LTR ERVK 0 584 87 6 1381 333 0 0 0 chrX 104424979 104425016 -62225280 + (TC)n Simple_repeat Simple_repeat 1 37 0 6 1381 180 0 0 0 chrX 104425016 104425035 -62225261 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 1381 1678 180 131 67 chrX 104425035 104425094 -62225202 - RLTR31A_Mm LTR ERVK -498 86 2 6 1381 2805 164 27 23 chrX 104425097 104425657 -62224639 - L1_Mur2 LINE L1 -632 5245 4684 6 1381 1564 318 81 97 chrX 104425651 104426118 -62224178 + Lx6 LINE L1 5874 6581 -879 6 1381 2660 67 6 3 chrX 104426118 104426464 -62223832 + L1_Mus2 LINE L1 6220 6566 0 6 1381 1564 281 170 47 chrX 104426464 104427216 -62223080 + Lx6 LINE L1 6582 7434 -26 6 1381 484 237 17 45 chrX 104427236 104427413 -62222883 + L1MA6 LINE L1 5500 5671 -629 6 1381 6622 102 13 3 chrX 104427417 104428418 -62221878 - L1_Mus4 LINE L1 -1 6635 5625 6 1381 399 242 69 46 chrX 104428487 104428660 -62221636 + L1MA6 LINE L1 5816 5992 -308 6 1381 1589 293 77 33 chrX 104429288 104429759 -62220537 + Lx8 LINE L1 6391 6890 -583 6 1381 591 172 52 0 chrX 104429759 104429893 -62220403 - L1_Mus3 LINE L1 -2 6636 6496 6 1381 1589 293 77 33 chrX 104429893 104430124 -62220172 + Lx8 LINE L1 6891 7124 -349 6 1381 30 59 0 0 chrX 104430393 104430444 -62219852 + AT_rich Low_complexity Low_complexity 1 51 0 6 1381 666 285 137 21 chrX 104430449 104430914 -62219382 + L1M4 LINE L1 5304 5818 -360 6 1381 1531 40 5 15 chrX 104430933 104431137 -62219159 + L1Md_F2 LINE L1 6381 6582 0 6 1381 1850 239 39 5 chrX 104431255 104431642 -62218654 + MTD LTR MaLR 20 419 0 6 1381 894 315 91 24 chrX 104431697 104432113 -62218183 + Lx8 LINE L1 6476 6919 -554 6 1381 2819 68 0 0 chrX 104432121 104432486 -62217810 - L1Md_F2 LINE L1 0 6582 6218 6 1381 5948 99 52 0 chrX 104432486 104433848 -62216448 - L1Md_F2 LINE L1 -236 6346 4875 6 1381 2271 156 0 8 chrX 104433846 104434241 -62216055 + L1_Mus4 LINE L1 5373 5770 -866 6 1381 1468 167 11 84 chrX 104434241 104434588 -62215708 - RLTRETN_Mm LTR ERVK 0 322 1 6 1381 988 177 0 24 chrX 104434588 104434616 -62215680 + L1_Mus4 LINE L1 5771 5794 -842 6 1381 9293 122 20 28 chrX 104434619 104436290 -62214006 - MMETn-int LTR ERVK -2503 5714 3219 6 1381 2938 83 0 20 chrX 104436352 104436794 -62213502 - MMETn-int LTR ERVK -3339 1505 1073 6 1381 2229 78 35 135 chrX 104436790 104437248 -62213048 - MMETn-int LTR ERVK -4431 413 2 6 1381 1006 143 11 37 chrX 104437249 104437438 -62212858 - RLTRETN_Mm LTR ERVK 0 322 139 6 1381 6365 58 5 11 chrX 104437438 104438312 -62211984 + L1Md_F2 LINE L1 5720 6582 0 6 1381 6365 58 5 11 chrX 104438312 104438323 -62211973 + L1Md_F2 LINE L1 6559 6570 -12 6 1381 5813 116 63 3 chrX 104438318 104439259 -62211037 + Lx4A LINE L1 5783 6779 -279 6 1381 2852 49 7 108 chrX 104439259 104439693 -62210603 + RLTR10 LTR ERVK 1 390 0 6 1381 4089 44 12 3 chrX 104439693 104440610 -62209686 + RLTR10-int LTR ERVK 1 998 -989 6 1381 310 266 39 15 chrX 104440674 104440804 -62209492 + RLTR10-int LTR ERVK 1462 1594 -5987 6 1381 8386 19 0 1 chrX 104440886 104441882 -62208414 + RLTR10-int LTR ERVK 990 1984 -3 6 1381 2852 49 7 108 chrX 104441884 104442318 -62207978 + RLTR10 LTR ERVK 1 390 0 6 1381 1475 174 30 4 chrX 104442318 104442583 -62207713 + Lx4A LINE L1 6774 7045 -13 6 1381 312 27 0 0 chrX 104442587 104442624 -62207672 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 1381 496 296 88 9 chrX 104442624 104442852 -62207444 + Lx7 LINE L1 6895 7151 -322 6 1381 618 105 0 0 chrX 104443569 104443674 -62206622 + (CA)n Simple_repeat Simple_repeat 2 106 0 6 1381 396 0 0 0 chrX 104443674 104443717 -62206579 + (GA)n Simple_repeat Simple_repeat 2 45 0 6 1381 23 33 0 0 chrX 104444733 104444763 -62205533 + AT_rich Low_complexity Low_complexity 1 30 0 6 1381 190 195 24 0 chrX 104445885 104445926 -62204370 + MIRm SINE MIR 112 153 -123 6 1381 199 234 21 0 chrX 104445892 104445939 -62204357 + MIR3 SINE MIR 114 161 -47 6 1381 358 288 0 12 chrX 104449482 104449563 -62200733 - B1F1 SINE Alu -68 81 2 6 1381 256 258 0 29 chrX 104449502 104449570 -62200726 - B4A SINE B4 -146 146 81 6 1381 852 70 23 0 chrX 104451222 104451351 -62198945 + (GA)n Simple_repeat Simple_repeat 1 132 0 6 1381 892 134 13 0 chrX 104451520 104451677 -62198619 + (TC)n Simple_repeat Simple_repeat 2 160 0 6 1381 22 0 0 0 chrX 104452763 104452785 -62197511 + AT_rich Low_complexity Low_complexity 1 22 0 6 1381 1187 68 0 0 chrX 104453572 104453719 -62196577 + B1_Mm SINE Alu 1 147 0 6 1381 252 368 57 29 chrX 104453866 104454006 -62196290 - MIRc SINE MIR -123 145 2 6 1381 28 71 0 0 chrX 104454980 104455036 -62195260 + AT_rich Low_complexity Low_complexity 1 56 0 6 1381 6502 101 1 0 chrX 104456344 104457241 -62193055 - L1_Mm LINE L1 -73 5810 4913 6 1381 2035 35 75 0 chrX 104458096 104458351 -62191945 - L1Md_T LINE L1 -1 6581 6308 6 1381 289 319 55 0 chrX 104461866 104461957 -62188339 - B1F1 SINE Alu -52 97 2 6 1381 6728 82 32 14 chrX 104462234 104463192 -62187104 - Lx3_Mus LINE L1 0 7009 6034 6 1382 252 321 121 0 chrX 104464576 104464716 -62185580 - MER96B DNA hAT -259 158 2 6 1382 252 86 0 0 chrX 104464845 104464880 -62185416 + (CATA)n Simple_repeat Simple_repeat 2 36 0 6 1382 207 69 0 0 chrX 104464885 104464914 -62185382 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1382 381 43 0 0 chrX 104465707 104465754 -62184542 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 6 1382 811 142 7 20 chrX 104465754 104465905 -62184391 - Lx4A LINE L1 -19 7039 6891 6 1382 1574 342 93 78 chrX 104466186 104466822 -62183474 - Lx8 LINE L1 -6 7467 6786 6 1382 5320 71 0 4 chrX 104466822 104467516 -62182780 - L1_Mus1 LINE L1 0 6567 5877 6 1382 1574 342 93 78 chrX 104467516 104468001 -62182295 - Lx8 LINE L1 -688 6785 6300 6 1382 282 29 0 0 chrX 104468001 104468036 -62182260 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 6 1382 1593 301 61 45 chrX 104468036 104468875 -62181421 - Lx8 LINE L1 -1174 6299 5473 6 1382 6623 103 27 4 chrX 104468903 104470421 -62179875 - L1Md_F2 LINE L1 -2 6580 5028 6 1382 2526 172 40 4 chrX 104470425 104470897 -62179399 - Lx5 LINE L1 -957 6093 5605 6 1382 8170 40 1 2 chrX 104470934 104472103 -62178193 - L1Md_F3 LINE L1 -14 6570 5404 6 1382 1354 283 51 12 chrX 104472107 104472600 -62177696 - Lx5 LINE L1 -294 5586 5075 6 1382 5912 133 27 17 chrX 104473052 104474027 -62176269 - Lx3B LINE L1 -7 6966 5983 6 1382 276 304 64 21 chrX 104477776 104477870 -62172426 - PB1D10 SINE Alu -7 110 13 6 1382 234 0 0 0 chrX 104477941 104477967 -62172329 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 1382 595 204 168 6 chrX 104478079 104478252 -62172044 - ORR1D1 LTR MaLR -4 370 170 6 1382 345 89 0 0 chrX 104478244 104478289 -62172007 - ORR1D1 LTR MaLR -312 62 18 6 1382 838 176 161 58 chrX 104478730 104478935 -62171361 - URR1A DNA MER1_type 0 226 1 6 1382 2786 94 14 5 chrX 104481329 104481745 -62168551 + L1_Mus3 LINE L1 6213 6632 -6 7 1382 212 153 32 48 chrX 104481926 104481988 -62168308 + (TTTG)n Simple_repeat Simple_repeat 1 61 0 7 1382 2451 175 22 22 chrX 104482465 104482963 -62167333 + Lx4B LINE L1 6513 7010 -48 7 1382 393 136 0 0 chrX 104482973 104483039 -62167257 + (TA)n Simple_repeat Simple_repeat 1 66 0 7 1382 2266 229 69 23 chrX 104483042 104483102 -62167194 - Lx9 LINE L1 -128 7516 7452 7 1382 546 29 0 0 chrX 104483102 104483170 -62167126 + (GA)n Simple_repeat Simple_repeat 2 69 0 7 1382 2266 229 69 23 chrX 104483170 104483721 -62166575 - Lx9 LINE L1 -193 7451 6877 7 1382 741 285 34 48 chrX 104484222 104484778 -62165518 - L1MA8 LINE L1 -395 5896 5358 7 1382 205 244 0 0 chrX 104485352 104485397 -62164899 + L3 LINE CR1 4350 4394 -95 7 1382 284 363 10 10 chrX 104485475 104485578 -62164718 + MER5A DNA MER1_type 35 137 -52 7 1382 241 103 229 49 chrX 104485695 104485756 -62164540 - MER5A1 DNA MER1_type -45 121 50 7 1382 1171 198 14 5 chrX 104485843 104486066 -62164230 - URR1B DNA MER1_type 0 225 1 7 1382 763 261 173 14 chrX 104486141 104486487 -62163809 - Lx8 LINE L1 -2 7471 7071 7 1382 2879 260 47 44 chrX 104486484 104487302 -62162994 + Lx8 LINE L1 6257 7076 -397 7 1382 6888 43 0 4 chrX 104492964 104493789 -62156507 + RLTR13B2 LTR ERVK 1 822 0 7 1382 5037 258 92 9 chrX 104494365 104495892 -62154404 - Lx7 LINE L1 -304 7392 5738 7 1382 467 173 0 111 chrX 104495906 104496023 -62154273 - L1_Mur3 LINE L1 -2854 3026 2923 7 1382 1573 229 89 30 chrX 104496037 104496510 -62153786 - RLTR16 LTR ERVK -4 501 1 7 1382 3550 108 8 6 chrX 104496524 104497045 -62153251 + L1_Mus4 LINE L1 6098 6619 -17 7 1382 207 100 0 0 chrX 104497046 104497076 -62153220 + (TAA)n Simple_repeat Simple_repeat 1 30 0 7 1382 1098 332 149 16 chrX 104497076 104497994 -62152302 + Lx8 LINE L1 6432 7471 -2 7 1382 1648 322 54 20 chrX 104498636 104499340 -62150956 - Lx9 LINE L1 -610 7034 6307 7 1382 429 270 405 21 chrX 104499335 104499572 -62150724 - Lx9 LINE L1 -213 7431 7104 7 1382 477 0 0 0 chrX 104499574 104499627 -62150669 + (TC)n Simple_repeat Simple_repeat 2 54 0 7 1382 242 213 0 0 chrX 104499679 104499726 -62150570 - Lx9 LINE L1 -494 7150 7104 7 1382 369 0 0 0 chrX 104499728 104499769 -62150527 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 1382 360 0 0 0 chrX 104499769 104499808 -62150488 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1382 631 318 23 14 chrX 104500046 104500260 -62150036 + B3 SINE B2 1 216 0 1 1382 2967 79 5 7 chrX 104500262 104500669 -62149627 - L1_Mus2 LINE L1 0 6566 6161 2 1382 529 289 78 14 chrX 104500750 104500973 -62149323 + L1M2 LINE L1 5327 5569 -728 3 1382 3465 75 2 17 chrX 104500973 104501449 -62148847 + L1Md_F2 LINE L1 6104 6572 -10 4 1382 529 289 78 14 chrX 104501449 104501506 -62148790 + L1M2 LINE L1 5570 5624 -673 3 1382 237 83 0 0 chrX 104501531 104501567 -62148729 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1382 273 143 0 0 chrX 104501573 104501622 -62148674 + L1_Mur2 LINE L1 2061 2109 -3768 6 1382 201 154 0 0 chrX 104501623 104501662 -62148634 + (TA)n Simple_repeat Simple_repeat 1 39 0 7 1382 404 235 66 1 chrX 104501669 104501788 -62148508 + L1M2 LINE L1 5673 5797 -494 3 1382 264 278 22 62 chrX 104502143 104502342 -62147954 - L1_Mur3 LINE L1 -1490 4650 4428 8 1382 339 301 22 102 chrX 104503474 104503611 -62146685 + MLT1H LTR MaLR 421 546 -3 9 1382 198 0 0 0 chrX 104504996 104505018 -62145278 + (GA)n Simple_repeat Simple_repeat 1 22 0 1 1382 1002 94 0 0 chrX 104505138 104505287 -62145009 - Lx2 LINE L1 -1 6996 6848 1 1382 355 300 60 72 chrX 104505295 104505476 -62144820 - B4A SINE B4 -68 224 5 1 1382 233 379 75 83 chrX 104505525 104505578 -62144718 + MLT1K LTR MaLR 19 79 -516 1 1382 204 40 0 0 chrX 104505578 104505603 -62144693 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 1 1382 233 379 75 83 chrX 104505603 104505814 -62144482 + MLT1K LTR MaLR 80 281 -314 1 1382 656 264 26 23 chrX 104506546 104506730 -62143566 + B3 SINE B2 28 213 -3 1 1382 259 291 115 23 chrX 104507051 104507181 -62143115 - MER58A DNA MER1_type -33 191 50 1 1382 284 329 96 13 chrX 104508421 104508575 -62141721 + MIR3 SINE MIR 37 198 -10 1 1382 940 178 0 17 chrX 104508688 104508860 -62141436 + RLTR18 LTR ERVK 273 441 -175 1 1382 1006 143 47 16 chrX 104508881 104509073 -62141223 - Lx3B LINE L1 0 6973 6776 1 1382 21 0 0 0 chrX 104509472 104509493 -62140803 + AT_rich Low_complexity Low_complexity 1 21 0 2 1382 329 336 86 80 chrX 104509585 104509924 -62140372 + L1M4c LINE L1 397 737 -5805 2 1382 377 314 13 0 chrX 104509932 104510088 -62140208 + L1M4c LINE L1 1629 1786 -4860 2 1382 308 298 63 20 chrX 104510135 104510436 -62139860 + L1M4c LINE L1 2793 3106 -3538 2 1382 271 338 55 0 chrX 104510743 104510888 -62139408 + Lx6 LINE L1 7139 7291 -169 2 1382 264 30 0 0 chrX 104511063 104511096 -62139200 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1382 212 276 35 0 chrX 104511096 104511154 -62139142 + (CACG)n Simple_repeat Simple_repeat 1 60 0 2 1382 28 0 0 0 chrX 104511324 104511352 -62138944 + AT_rich Low_complexity Low_complexity 1 28 0 2 1382 6738 50 1 2 chrX 104511377 104512221 -62138075 + L1Md_F2 LINE L1 5740 6582 0 2 1382 25 24 0 23 chrX 104512649 104512667 -62137629 + AT_rich Low_complexity Low_complexity 1 18 0 2 1382 1146 75 0 0 chrX 104512667 104512814 -62137482 - B1_Mus2 SINE Alu 0 147 1 2 1382 25 24 0 23 chrX 104512814 104512838 -62137458 + AT_rich Low_complexity Low_complexity 1 24 0 2 1382 225 234 44 18 chrX 104512860 104512973 -62137323 + L1M4c LINE L1 3339 3454 -3190 2 1382 1746 181 129 3 chrX 104513026 104513376 -62136920 - ORR1B1 LTR MaLR 0 394 1 3 1382 1558 236 104 83 chrX 104513502 104514167 -62136129 + RMER6C LTR ERVK 8 686 -4 3 1382 388 276 35 7 chrX 104514223 104514365 -62135931 + L1M4c LINE L1 6091 6236 -442 2 1382 354 242 177 12 chrX 104514363 104514606 -62135690 - L1M3 LINE L1 -1706 4434 4152 3 1382 316 286 92 20 chrX 104514689 104514885 -62135411 + L1MA8 LINE L1 5465 5674 -638 3 1382 621 308 13 0 chrX 104514887 104515046 -62135250 + Lx8 LINE L1 7161 7321 -152 3 1382 866 129 15 10 chrX 104515053 104515256 -62135040 + CT-rich Low_complexity Low_complexity 1 203 0 3 1382 24 53 0 0 chrX 104515418 104515456 -62134840 + AT_rich Low_complexity Low_complexity 1 38 0 3 1382 530 297 56 4 chrX 104515457 104515751 -62134545 + L1MA8 LINE L1 5696 6007 -182 3 1382 29 60 0 0 chrX 104515883 104515933 -62134363 + AT_rich Low_complexity Low_complexity 1 50 0 3 1382 612 311 59 4 chrX 104516849 104517120 -62133176 + L1M2 LINE L1 4424 4709 -1434 3 1382 602 325 0 13 chrX 104517124 104517280 -62133016 + RSINE1 SINE B4 5 158 -7 3 1382 1574 272 31 48 chrX 104517463 104518171 -62132125 - Lx6 LINE L1 -26 7434 6428 4 1382 2036 166 50 3 chrX 104518320 104518682 -62131614 - MTC LTR MaLR -42 379 1 4 1382 572 246 35 71 chrX 104518754 104519008 -62131288 + Lx9 LINE L1 7398 7642 -2 4 1382 5756 119 46 11 chrX 104519193 104520126 -62130170 + Lx2 LINE L1 6032 6997 0 4 1382 22 35 0 0 chrX 104520588 104520617 -62129679 + AT_rich Low_complexity Low_complexity 1 29 0 4 1382 447 68 0 0 chrX 104521411 104521470 -62128826 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1382 927 51 0 0 chrX 104521721 104521838 -62128458 + (TCTCC)n Simple_repeat Simple_repeat 2 118 0 4 1382 326 325 75 23 chrX 104522041 104522210 -62128086 - MIR SINE MIR -81 187 12 4 1382 203 183 16 32 chrX 104522305 104522367 -62127929 + (TTTG)n Simple_repeat Simple_repeat 4 64 0 4 1382 218 224 20 0 chrX 104523522 104523571 -62126725 - B4 SINE B4 -241 51 2 4 1382 393 261 50 0 chrX 104523584 104523703 -62126593 + Lx5 LINE L1 6926 7050 0 5 1382 437 255 0 10 chrX 104523980 104524083 -62126213 - B1F SINE Alu -2 147 46 5 1382 6261 34 5 1 chrX 104524088 104524831 -62125465 + L1Md_F2 LINE L1 5829 6574 -8 5 1382 21 57 0 0 chrX 104525037 104525072 -62125224 + AT_rich Low_complexity Low_complexity 1 35 0 5 1382 383 98 0 16 chrX 104525553 104525615 -62124681 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 1382 35366 36 0 0 chrX 104525757 104530982 -62119314 + L1Md_T LINE L1 268 5589 -297 5 1382 8990 5 0 0 chrX 104530982 104531978 -62118318 + L1Md_T LINE L1 5590 6585 0 5 1382 245 210 0 16 chrX 104532111 104532174 -62118122 + GA-rich Low_complexity Low_complexity 4 65 0 5 1382 522 0 0 0 chrX 104532250 104532308 -62117988 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 1382 264 385 93 12 chrX 104532496 104532906 -62117390 + L2 LINE L2 1925 2367 -1052 5 1382 402 83 42 0 chrX 104533615 104533687 -62116609 + (TA)n Simple_repeat Simple_repeat 1 75 0 5 1382 315 0 0 0 chrX 104533763 104533798 -62116498 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1382 21 36 0 0 chrX 104533956 104533984 -62116312 + AT_rich Low_complexity Low_complexity 1 28 0 6 1382 21 0 0 0 chrX 104534521 104534542 -62115754 + AT_rich Low_complexity Low_complexity 1 21 0 6 1382 1797 161 10 10 chrX 104534680 104534988 -62115308 + RLTR10E LTR ERVK 1 308 -3 6 1382 198 0 0 0 chrX 104535826 104535848 -62114448 + (TA)n Simple_repeat Simple_repeat 1 22 0 6 1382 770 229 166 26 chrX 104535848 104535952 -62114344 - Lx9 LINE L1 -15 7629 7485 6 1382 378 0 0 0 chrX 104535952 104535994 -62114302 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1382 770 229 166 26 chrX 104535994 104536202 -62114094 - Lx9 LINE L1 -160 7484 7275 6 1382 886 173 7 0 chrX 104536199 104536338 -62113958 + Lx9 LINE L1 7139 7278 -366 6 1382 200 182 0 0 chrX 104536657 104536690 -62113606 + CT-rich Low_complexity Low_complexity 2 34 0 6 1382 2700 92 8 3 chrX 104536876 104537301 -62112995 + L1_Mus3 LINE L1 6248 6638 0 6 1382 199 79 26 26 chrX 104538439 104538478 -62111818 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 1382 203 0 0 36 chrX 104538543 104538571 -62111725 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 7 1382 256 189 27 0 chrX 104538748 104538822 -62111474 + (TA)n Simple_repeat Simple_repeat 2 77 0 7 1382 312 340 18 27 chrX 104538836 104538948 -62111348 - B1F SINE Alu -31 118 8 7 1382 261 213 31 21 chrX 104539137 104539233 -62111063 + (TTATA)n Simple_repeat Simple_repeat 5 101 0 7 1382 341 193 43 7 chrX 104539244 104539385 -62110911 + (TA)n Simple_repeat Simple_repeat 1 146 0 7 1382 29 0 0 0 chrX 104539484 104539513 -62110783 + AT_rich Low_complexity Low_complexity 1 29 0 7 1382 513 178 307 5 chrX 104539513 104539695 -62110601 - Lx9 LINE L1 -2 7642 7406 7 1382 8266 147 18 9 chrX 104541582 104543213 -62107083 + Lx2A1 LINE L1 5360 7007 -1 7 1382 244 368 0 0 chrX 104543375 104543432 -62106864 + PB1D9 SINE Alu 2 58 -62 7 1382 186 227 0 0 chrX 104543432 104543476 -62106820 + GA-rich Low_complexity Low_complexity 4 47 0 7 1382 1089 52 0 0 chrX 104543523 104543657 -62106639 - L1Md_F2 LINE L1 -247 6335 6202 8 1382 359 111 68 27 chrX 104543657 104543731 -62106565 + L1Md_F2 LINE L1 6495 6571 -11 8 1382 3515 71 0 11 chrX 104543830 104544302 -62105994 - L1Md_F2 LINE L1 -12 6570 6104 8 1382 8126 62 5 0 chrX 104544311 104545356 -62104940 + L1Md_F2 LINE L1 4537 5586 -297 8 1382 7949 48 7 0 chrX 104545356 104546344 -62103952 + L1Md_F2 LINE L1 5587 6581 -1 8 1382 183 388 12 0 chrX 104546789 104546869 -62103427 - L2 LINE L2 -641 2778 2698 8 1382 936 48 0 0 chrX 104548308 104548432 -62101864 - L1_Mus3 LINE L1 -575 6063 5940 8 1382 3935 85 30 6 chrX 104548432 104548974 -62101322 + L1_Mus3 LINE L1 6077 6631 -7 8 1382 202 244 0 0 chrX 104550890 104550935 -62099361 + T-rich Low_complexity Low_complexity 1 45 0 8 1382 7386 65 2 2 chrX 104550946 104551886 -62098410 - L1Md_F2 LINE L1 -17 6565 5626 8 1382 6430 72 0 0 chrX 104551883 104552719 -62097577 + L1_Mm LINE L1 4303 5138 -745 8 1382 4153 50 9 9 chrX 104552858 104553386 -62096910 + L1Md_F3 LINE L1 6055 6582 -2 8 1382 457 263 90 76 chrX 104553692 104553731 -62096565 + RSINE1 SINE B4 5 42 -123 9 1382 2996 74 26 0 chrX 104553731 104554121 -62096175 - MTB LTR MaLR 0 400 1 9 1382 457 263 90 76 chrX 104554121 104554225 -62096071 + RSINE1 SINE B4 43 150 -15 9 1382 21 57 0 0 chrX 104554228 104554263 -62096033 + AT_rich Low_complexity Low_complexity 1 35 0 9 1382 24 53 0 0 chrX 104554362 104554400 -62095896 + AT_rich Low_complexity Low_complexity 1 38 0 9 1382 198 191 0 0 chrX 104554621 104554668 -62095628 + CT-rich Low_complexity Low_complexity 1 47 0 9 1382 711 281 62 5 chrX 104554674 104554885 -62095411 - ID_B1 SINE B4 0 224 2 9 1382 23 33 0 0 chrX 104554885 104554915 -62095381 + AT_rich Low_complexity Low_complexity 1 30 0 9 1382 262 204 9 75 chrX 104556049 104556155 -62094141 - Lx9 LINE L1 0 7644 7546 9 1382 333 314 38 47 chrX 104557962 104558173 -62092123 + L1MB4 LINE L1 580 788 -5819 9 1382 4421 88 6 0 chrX 104558431 104559071 -62091225 + L1_Mus3 LINE L1 5536 6179 -459 9 1382 1891 54 81 4 chrX 104559070 104559331 -62090965 + L1_Mus3 LINE L1 6336 6616 -22 9 1382 1992 120 12 16 chrX 104559331 104559652 -62090644 - Lx LINE L1 -10 6644 6325 1 1382 193 70 0 65 chrX 104560384 104560430 -62089866 + (CAAAAA)n Simple_repeat Simple_repeat 4 46 0 1 1382 1285 296 28 49 chrX 104560435 104561031 -62089265 - Lx8 LINE L1 -1560 6615 5999 1 1382 240 313 12 0 chrX 104560985 104561068 -62089228 + L1M2 LINE L1 3608 3691 -2452 1 1382 993 98 18 0 chrX 104561113 104561276 -62089020 - L1_Mus3 LINE L1 -2 6636 6471 1 1382 374 280 55 60 chrX 104561298 104561482 -62088814 - Lx8 LINE L1 -2309 4533 4358 1 1382 502 328 114 28 chrX 104561507 104562394 -62087902 - Lx8 LINE L1 -2521 4061 3130 1 1382 476 111 12 0 chrX 104562416 104562497 -62087799 + (TG)n Simple_repeat Simple_repeat 1 82 0 1 1382 570 264 139 45 chrX 104562502 104562755 -62087541 - B4A SINE B4 -23 269 1 1 1382 269 231 22 11 chrX 104562764 104562856 -62087440 - L1_Rod LINE L1 -3422 2425 2333 1 1382 207 109 53 35 chrX 104562861 104562918 -62087378 + (CTTTA)n Simple_repeat Simple_repeat 2 59 0 1 1382 413 289 102 65 chrX 104562925 104563793 -62086503 - Lx8 LINE L1 -3832 3010 2089 1 1382 210 37 0 0 chrX 104564034 104564061 -62086235 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1382 465 331 0 8 chrX 104564305 104564430 -62085866 - B4A SINE B4 -3 289 166 1 1382 201 74 0 0 chrX 104564554 104564581 -62085715 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1382 224 122 41 0 chrX 104564580 104564629 -62085667 + (CATA)n Simple_repeat Simple_repeat 2 52 0 1 1382 256 267 0 0 chrX 104564633 104564693 -62085603 + A-rich Low_complexity Low_complexity 3 62 0 1 1382 884 150 6 0 chrX 104566307 104566467 -62083829 + (TA)n Simple_repeat Simple_repeat 2 162 0 1 1382 204 282 35 0 chrX 104566549 104566634 -62083662 + (TGAA)n Simple_repeat Simple_repeat 3 90 0 1 1382 25 0 0 0 chrX 104566785 104566810 -62083486 + AT_rich Low_complexity Low_complexity 1 25 0 1 1382 3254 250 58 66 chrX 104567733 104568166 -62082130 - L1_Mur3 LINE L1 -1959 3918 3471 1 1382 1190 88 0 0 chrX 104568166 104568326 -62081970 - B2_Mm2 SINE B2 -34 161 2 1 1382 3254 250 58 66 chrX 104568326 104569237 -62081059 - L1_Mur3 LINE L1 -1959 3470 2526 1 1382 2073 80 0 17 chrX 104569237 104569531 -62080765 + L1Md_F2 LINE L1 6292 6580 -2 1 1382 3254 236 59 30 chrX 104569531 104569763 -62080533 - L1_Mur3 LINE L1 -3341 2539 2305 1 1382 354 355 0 0 chrX 104570018 104570125 -62080171 - PB1D10 SINE Alu -8 109 3 1 1382 186 128 0 0 chrX 104570281 104570320 -62079976 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 1 1382 214 200 0 0 chrX 104570320 104570360 -62079936 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 1382 405 102 0 0 chrX 104570360 104570419 -62079877 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1382 398 219 0 0 chrX 104570463 104570559 -62079737 - Lx6 LINE L1 -26 7434 7339 1 1382 1190 223 183 37 chrX 104570588 104570628 -62079668 - MTD LTR MaLR -5 414 379 1 1382 188 34 0 33 chrX 104570628 104570658 -62079638 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1382 1190 223 183 37 chrX 104570658 104570966 -62079330 - MTD LTR MaLR -41 378 15 1 1382 340 98 0 0 chrX 104571056 104571117 -62079179 - Lx LINE L1 -4 6650 6590 1 1382 4731 137 10 5 chrX 104571118 104571906 -62078390 - L1_Mm LINE L1 -1160 4723 3932 1 1382 2027 106 3 26 chrX 104571898 104571948 -62078348 - L1VL2 LINE L1 -2372 1243 1198 1 1382 2890 35 0 47 chrX 104571948 104572311 -62077985 - ORR1A0 LTR MaLR 0 346 1 1 1382 5189 145 22 12 chrX 104572311 104573390 -62076906 - L1VL2 LINE L1 -2418 1197 99 1 1382 434 319 0 4 chrX 104573403 104573606 -62076690 - L1M2 LINE L1 -3727 3118 2919 1 1382 22 56 0 0 chrX 104573726 104573762 -62076534 + AT_rich Low_complexity Low_complexity 1 36 0 1 1382 543 278 54 45 chrX 104574044 104574479 -62075817 - L1M2 LINE L1 -4271 2578 1780 1 1382 25400 143 35 16 chrX 104574641 104580718 -62069578 + L1_Mus3 LINE L1 471 6638 0 1 1382 314 291 38 28 chrX 104580930 104581036 -62069260 + ERVL-E-int LTR ERVL 2642 2748 -2919 1 1382 387 0 0 0 chrX 104581266 104581309 -62068987 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1382 2033 226 89 31 chrX 104581892 104581979 -62068317 - RLTR20A LTR ERVK -2 539 443 1 1382 372 43 0 0 chrX 104581979 104582025 -62068271 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1382 2033 226 89 31 chrX 104582025 104582445 -62067851 - RLTR20A LTR ERVK -99 442 3 1 1382 6242 143 45 27 chrX 104582447 104582484 -62067812 - MYSERV16_I-int LTR ERVK -2 2324 2299 1 1382 6275 94 5 11 chrX 104582484 104583382 -62066914 + Lx LINE L1 5756 6647 -7 1 1382 6242 143 45 27 chrX 104583382 104583925 -62066371 - MYSERV16_I-int LTR ERVK -28 2298 1741 1 1382 2247 98 6 6 chrX 104583925 104584252 -62066044 - ORR1A2 LTR MaLR 0 327 1 1 1382 6242 182 35 44 chrX 104584252 104586026 -62064270 - MYSERV16_I-int LTR ERVK -586 1740 1 1 1382 1826 236 77 64 chrX 104586779 104586864 -62063432 - RLTR20A LTR ERVK 0 541 453 1 1382 243 0 0 0 chrX 104586864 104586891 -62063405 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1382 1826 236 77 64 chrX 104586891 104587339 -62062957 - RLTR20A LTR ERVK -89 452 1 1 1382 833 304 93 51 chrX 104587573 104587927 -62062369 - MTD LTR MaLR -26 393 25 1 1382 640 87 19 9 chrX 104587969 104588074 -62062222 + (GAAA)n Simple_repeat Simple_repeat 1 106 0 1 1382 271 383 52 9 chrX 104588136 104588252 -62062044 + LTR33 LTR ERVL 46 166 -349 1 1382 279 0 0 0 chrX 104588263 104588294 -62062002 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1382 443 18 18 0 chrX 104588294 104588349 -62061947 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 1382 287 239 10 42 chrX 104588526 104588622 -62061674 - Lx8 LINE L1 -5 7468 7376 1 1382 207 0 0 0 chrX 104590109 104590132 -62060164 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1382 270 304 11 11 chrX 104590389 104590482 -62059814 + SRV_MM-int LTR ERVK 1903 1995 -4172 1 1382 805 238 67 38 chrX 104591072 104591282 -62059014 - B3 SINE B2 0 216 1 1 1382 674 203 164 0 chrX 104591347 104591554 -62058742 - Lx9 LINE L1 -4 7640 7400 1 1382 325 301 32 16 chrX 104591565 104591690 -62058606 - PB1 SINE Alu 0 127 1 1 1382 421 255 19 84 chrX 104592015 104592169 -62058127 + RSINE1 SINE B4 15 158 -7 1 1382 584 250 66 33 chrX 104593797 104593979 -62056317 - L1MA5 LINE L1 -275 6025 5838 1 1382 26 0 0 0 chrX 104595183 104595209 -62055087 + AT_rich Low_complexity Low_complexity 1 26 0 1 1382 788 28 0 0 chrX 104595236 104595342 -62054954 - L1Md_T LINE L1 0 6582 6477 1 172 26 30 0 0 chrX 104595454 104595487 -62054809 + AT_rich Low_complexity Low_complexity 1 33 0 1 1383 374 209 75 9 chrX 104595493 104595599 -62054697 - L1MB1 LINE L1 0 6168 6056 1 1383 24 0 0 0 chrX 104596357 104596381 -62053915 + AT_rich Low_complexity Low_complexity 1 24 0 1 1383 182 322 34 0 chrX 104596525 104596584 -62053712 - MIR SINE MIR -65 143 83 1 1383 24 32 0 0 chrX 104597744 104597775 -62052521 + AT_rich Low_complexity Low_complexity 1 31 0 1 1383 210 222 0 0 chrX 104597908 104597962 -62052334 + (CG)n Simple_repeat Simple_repeat 2 55 0 1 1383 209 128 0 25 chrX 104599778 104599818 -62050478 + A-rich Low_complexity Low_complexity 4 42 0 1 1383 188 361 0 14 chrX 104600472 104600545 -62049751 + MIR SINE MIR 64 135 -127 1 1383 426 96 0 0 chrX 104600989 104601062 -62049234 + (TC)n Simple_repeat Simple_repeat 2 74 0 1 1383 23 33 0 0 chrX 104602160 104602190 -62048106 + AT_rich Low_complexity Low_complexity 1 30 0 1 1383 244 279 33 0 chrX 104602701 104602762 -62047534 - MIRm SINE MIR -121 155 93 1 1383 436 266 89 0 chrX 104603326 104603450 -62046846 + ID_B1 SINE B4 83 217 -7 1 1383 874 52 0 0 chrX 104605308 104605423 -62044873 + L1_Mus1 LINE L1 6453 6567 0 1 1383 23 0 0 0 chrX 104605423 104605446 -62044850 + AT_rich Low_complexity Low_complexity 1 23 0 1 1383 432 0 0 0 chrX 104605622 104605670 -62044626 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1383 567 133 125 0 chrX 104606005 104606125 -62044171 + Lx2 LINE L1 6863 6997 0 1 1383 1142 63 0 0 chrX 104606135 104606277 -62044019 + B1_Mus1 SINE Alu 1 142 -6 1 1383 25 0 0 0 chrX 104606669 104606694 -62043602 + AT_rich Low_complexity Low_complexity 1 25 0 1 1383 295 353 33 8 chrX 104606827 104606947 -62043349 - MIRc SINE MIR -144 124 2 1 1383 232 309 12 12 chrX 104607558 104607640 -62042656 + GA-rich Low_complexity Low_complexity 3 84 0 1 1383 426 0 0 72 chrX 104608587 104608656 -62041640 + (CAAAAA)n Simple_repeat Simple_repeat 2 65 0 1 1383 620 325 19 24 chrX 104608885 104609090 -62041206 + ID_B1 SINE B4 7 210 -14 1 1383 216 209 0 23 chrX 104610291 104610335 -62039961 - L3 LINE CR1 -10 4479 4437 1 1383 23 33 0 0 chrX 104610639 104610669 -62039627 + AT_rich Low_complexity Low_complexity 1 30 0 1 1383 37 0 0 0 chrX 104610772 104610809 -62039487 + AT_rich Low_complexity Low_complexity 1 37 0 1 1383 387 0 0 0 chrX 104613695 104613738 -62036558 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1383 860 286 58 64 chrX 104613988 104614470 -62035826 + L1MB7 LINE L1 5675 6153 -31 1 1383 303 93 0 0 chrX 104614714 104614757 -62035539 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1383 23 97 0 0 chrX 104615189 104615261 -62035035 + AT_rich Low_complexity Low_complexity 1 72 0 1 1383 187 177 77 46 chrX 104615530 104615595 -62034701 + L3 LINE CR1 2553 2619 -1870 1 1383 288 0 0 0 chrX 104616066 104616098 -62034198 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1383 22 61 0 43 chrX 104617698 104617767 -62032529 + AT_rich Low_complexity Low_complexity 1 66 0 1 1383 7292 109 44 14 chrX 104617986 104618085 -62032211 + Lx3_Mus LINE L1 5806 5907 -1102 1 1383 693 0 0 0 chrX 104618085 104618162 -62032134 + (GAA)n Simple_repeat Simple_repeat 1 77 0 1 1383 7292 109 44 14 chrX 104618162 104619216 -62031080 + Lx3_Mus LINE L1 5908 6993 -16 1 1383 549 0 0 0 chrX 104619516 104619577 -62030719 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 1 1383 807 290 73 40 chrX 104619628 104619955 -62030341 + ORR1E LTR MaLR 1 338 -21 1 1383 208 235 0 0 chrX 104620904 104620955 -62029341 + (ACTG)n Simple_repeat Simple_repeat 4 54 0 1 1383 487 327 59 10 chrX 104621237 104621441 -62028855 + MER20 DNA MER1_type 6 219 0 1 1383 30 0 0 0 chrX 104621921 104621951 -62028345 + AT_rich Low_complexity Low_complexity 1 30 0 1 1383 21 57 0 0 chrX 104622030 104622065 -62028231 + AT_rich Low_complexity Low_complexity 1 35 0 1 1383 2160 104 64 9 chrX 104622075 104622179 -62028117 - Lx3A LINE L1 -2 6979 6879 1 1383 282 29 0 0 chrX 104622179 104622214 -62028082 + (CCCCCA)n Simple_repeat Simple_repeat 3 37 0 1 1383 2160 104 64 9 chrX 104622214 104622438 -62027858 - Lx3A LINE L1 -103 6878 6634 1 1383 1614 251 68 9 chrX 104622637 104623064 -62027232 - Lx7 LINE L1 -361 7335 6884 1 1383 1038 119 0 0 chrX 104623946 104624089 -62026207 - B1_Mur4 SINE Alu -7 143 1 2 1383 333 0 0 0 chrX 104624154 104624191 -62026105 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1383 185 0 40 0 chrX 104624197 104624222 -62026074 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2 1383 3060 76 0 0 chrX 104624237 104624646 -62025650 - L1Md_F2 LINE L1 0 6582 6174 2 1383 1340 202 71 82 chrX 104624892 104625087 -62025209 - ORR1C2 LTR MaLR -4 380 172 2 1383 918 125 0 0 chrX 104625087 104625231 -62025065 + (TA)n Simple_repeat Simple_repeat 2 145 0 2 1383 198 0 0 0 chrX 104625231 104625253 -62025043 + (GA)n Simple_repeat Simple_repeat 1 22 0 2 1383 1340 202 71 82 chrX 104625253 104625434 -62024862 - ORR1C2 LTR MaLR -213 171 8 2 1383 23 54 0 0 chrX 104625815 104625852 -62024444 + AT_rich Low_complexity Low_complexity 1 37 0 2 1383 2097 229 25 5 chrX 104626418 104626849 -62023447 - Lx6 LINE L1 -4 7456 7017 2 1383 283 274 101 39 chrX 104626850 104626881 -62023415 - MTC LTR MaLR -185 194 167 2 1383 240 59 0 0 chrX 104626881 104626915 -62023381 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1383 850 140 60 0 chrX 104626915 104627055 -62023241 - MTC LTR MaLR -226 195 48 2 1383 428 169 14 0 chrX 104627068 104627139 -62023157 - Lx6 LINE L1 -485 6975 6904 2 1383 24 0 0 0 chrX 104627380 104627404 -62022892 + AT_rich Low_complexity Low_complexity 1 24 0 2 1383 3572 66 0 6 chrX 104628144 104628614 -62021682 - L1Md_F2 LINE L1 -1 6581 6115 2 1383 317 331 131 31 chrX 104628899 104629158 -62021138 - B4A SINE B4 -6 286 2 2 1383 678 228 74 18 chrX 104629256 104629512 -62020784 - Lx3C LINE L1 -8 7050 6710 2 1383 221 301 27 27 chrX 104629967 104630042 -62020254 + L2a LINE L2 3352 3426 0 2 1383 387 0 0 0 chrX 104630360 104630403 -62019893 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2 1383 21 57 0 0 chrX 104630742 104630777 -62019519 + AT_rich Low_complexity Low_complexity 1 35 0 2 1383 405 0 0 0 chrX 104630833 104630878 -62019418 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 1383 563 95 95 0 chrX 104631465 104631570 -62018726 - L1_Mus2 LINE L1 0 6566 6452 2 1383 207 100 0 0 chrX 104632588 104632618 -62017678 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1383 426 85 0 0 chrX 104633038 104633097 -62017199 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 1383 38 22 0 0 chrX 104633107 104633152 -62017144 + AT_rich Low_complexity Low_complexity 1 45 0 2 1383 653 234 55 62 chrX 104633162 104633320 -62016976 - Lx2B LINE L1 -1 6999 6845 2 1383 360 0 0 0 chrX 104633320 104633360 -62016936 + (CAT)n Simple_repeat Simple_repeat 1 40 0 2 1383 653 234 55 62 chrX 104633360 104633475 -62016821 - Lx2B LINE L1 -156 6844 6728 2 1383 36 40 0 0 chrX 104633803 104633853 -62016443 + AT_rich Low_complexity Low_complexity 1 50 0 2 1383 7559 36 7 1 chrX 104633853 104634758 -62015538 - L1Md_T LINE L1 -1 6581 5672 2 1383 875 162 21 38 chrX 104635779 104635965 -62014331 - Lx2 LINE L1 0 6997 6815 2 1383 2121 91 10 3 chrX 104637352 104637649 -62012647 - L1_Mus3 LINE L1 -7 6631 6333 2 1383 691 75 0 0 chrX 104637649 104637743 -62012553 + L1_Mus3 LINE L1 6237 6330 -308 2 1383 1168 61 0 0 chrX 104638162 104638309 -62011987 + B1_Mus2 SINE Alu 1 147 0 2 1383 429 20 0 0 chrX 104638381 104638431 -62011865 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1383 495 95 0 0 chrX 104638496 104638570 -62011726 + (GGA)n Simple_repeat Simple_repeat 2 75 0 2 1383 1039 168 5 5 chrX 104638788 104638979 -62011317 + URR1A DNA MER1_type 36 226 0 2 1383 929 293 68 8 chrX 104639421 104639669 -62010627 + B4 SINE B4 20 282 -10 2 1383 507 17 0 0 chrX 104639685 104639745 -62010551 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 1383 456 72 0 0 chrX 104639745 104639814 -62010482 + (GA)n Simple_repeat Simple_repeat 1 69 0 2 1383 29 0 0 0 chrX 104640635 104640664 -62009632 + AT_rich Low_complexity Low_complexity 1 29 0 2 1383 1123 254 84 21 chrX 104641211 104641686 -62008610 - L1MB5 LINE L1 -77 6097 5593 2 1383 1066 99 0 0 chrX 104641691 104641842 -62008454 + B2_Mm2 SINE B2 1 151 -44 2 1383 216 0 0 0 chrX 104641846 104641870 -62008426 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 2 1383 24 0 0 0 chrX 104642011 104642035 -62008261 + AT_rich Low_complexity Low_complexity 1 24 0 2 1383 399 345 40 20 chrX 104642058 104642206 -62008090 - RSINE1 SINE B4 -12 153 3 2 1383 4354 106 5 0 chrX 104642643 104643258 -62007038 - Lx3_Mus LINE L1 0 7009 6392 2 1383 28770 113 12 48 chrX 104643260 104645495 -62004801 - L1_Mus1 LINE L1 0 6567 4328 2 1383 1916 49 90 4 chrX 104645495 104645762 -62004534 - RLTR10B LTR ERVK 0 292 3 2 1383 28770 113 12 48 chrX 104645762 104649709 -62000587 - L1_Mus1 LINE L1 0 4327 371 2 1383 3262 90 111 8 chrX 104649705 104650153 -62000143 - Lx3_Mus LINE L1 -602 6407 5907 2 1383 746 97 9 0 chrX 104650153 104650266 -62000030 + (TTTC)n Simple_repeat Simple_repeat 3 116 0 2 1383 3262 90 111 8 chrX 104650266 104650321 -61999975 - Lx3_Mus LINE L1 -1103 5906 5852 2 1383 1278 97 9 42 chrX 104650322 104650538 -61999758 - L1_Mus3 LINE L1 -8 6630 6422 2 1383 311 113 19 0 chrX 104650803 104650856 -61999440 + (GAAAA)n Simple_repeat Simple_repeat 5 58 0 2 1383 6136 108 16 2 chrX 104650962 104651854 -61998442 + Lx LINE L1 5751 6654 0 2 1383 899 183 169 12 chrX 104652848 104653102 -61997194 - Lx9 LINE L1 -3 7641 7348 2 1383 387 256 88 12 chrX 104653821 104653991 -61996305 - L1M4 LINE L1 -1287 4859 4677 2 1383 360 64 0 0 chrX 104654095 104654142 -61996154 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 2 1383 971 136 0 0 chrX 104654142 104654282 -61996014 - B1_Mus1 SINE Alu -6 142 3 2 1383 394 309 0 0 chrX 104654363 104654457 -61995839 + PB1D10 SINE Alu 18 111 -6 2 1383 338 291 36 1 chrX 104654476 104654703 -61995593 - L1M4 LINE L1 -1931 4215 3982 2 1383 236 318 32 106 chrX 104654888 104655011 -61995285 - PB1D10 SINE Alu -1 116 3 2 1383 20046 78 11 32 chrX 104655112 104658808 -61991488 - L1Md_F2 LINE L1 -2 6580 2969 2 1383 547 205 108 16 chrX 104660012 104660141 -61990155 - B1_Mur3 SINE Alu -7 142 2 2 1383 1142 194 44 0 chrX 104660548 104660754 -61989542 - B3 SINE B2 0 216 2 2 1383 504 0 0 0 chrX 104660832 104660888 -61989408 + (TC)n Simple_repeat Simple_repeat 2 57 0 2 1383 3301 51 2 0 chrX 104661195 104661590 -61988706 - MTA_Mm LTR MaLR 0 396 1 2 1383 2651 218 156 70 chrX 104662624 104663456 -61986840 + RMER13B LTR ERVK 5 908 0 2 1383 1095 238 13 8 chrX 104663456 104663693 -61986603 - MTD LTR MaLR -2 417 180 2 1383 206 32 32 0 chrX 104665182 104665213 -61985083 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 1383 4439 88 5 3 chrX 104665293 104665909 -61984387 - L1Md_F2 LINE L1 0 6582 5966 2 1383 658 286 36 6 chrX 104666233 104666549 -61983747 - L1M2 LINE L1 -3131 3015 2686 2 1383 1052 99 0 7 chrX 104666693 104666836 -61983460 - B1_Mus1 SINE Alu -6 142 1 2 1383 344 349 106 13 chrX 104667083 104667234 -61983062 + B4A SINE B4 114 278 -14 2 1383 684 67 0 0 chrX 104667250 104667340 -61982956 + (CA)n Simple_repeat Simple_repeat 1 90 0 2 1383 380 78 0 30 chrX 104667378 104667444 -61982852 + (GAAAA)n Simple_repeat Simple_repeat 2 65 0 2 1383 697 271 63 122 chrX 104667719 104668081 -61982215 - RLTR18 LTR ERVK 0 616 139 2 1383 708 262 6 39 chrX 104668111 104668290 -61982006 - RLTR18 LTR ERVK -443 173 1 2 1383 1491 268 126 12 chrX 104669555 104670133 -61980163 + L1MA6 LINE L1 5613 6256 -44 2 1383 528 200 0 0 chrX 104670195 104670305 -61979991 + (TA)n Simple_repeat Simple_repeat 2 111 0 2 1383 316 246 81 29 chrX 104670743 104670910 -61979386 - B3 SINE B2 -7 209 3 2 1383 1010 55 7 7 chrX 104672696 104672843 -61977453 + L1Md_F2 LINE L1 6433 6579 -3 2 1383 224 59 29 0 chrX 104672862 104672896 -61977400 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 2 1383 28 29 0 0 chrX 104673155 104673190 -61977106 + AT_rich Low_complexity Low_complexity 1 35 0 2 1383 198 191 0 0 chrX 104673356 104673398 -61976898 + GA-rich Low_complexity Low_complexity 1 42 0 2 1383 1138 141 91 0 chrX 104673445 104673644 -61976652 - Lx3A LINE L1 -5 6976 6760 2 1383 194 268 54 0 chrX 104673764 104673820 -61976476 - MIRb SINE MIR -56 212 154 2 1383 277 128 0 0 chrX 104673868 104673907 -61976389 + RMER6D LTR ERVK 1 39 -681 2 1383 481 197 22 118 chrX 104673917 104674085 -61976211 + MT2B LTR ERVL 154 286 -315 2 1383 224 388 107 0 chrX 104674010 104674113 -61976183 + B4A SINE B4 88 201 -91 2 1383 259 223 58 0 chrX 104674113 104674216 -61976080 + (CAGTG)n Simple_repeat Simple_repeat 2 110 0 2 1383 1240 156 58 82 chrX 104674223 104674551 -61975745 + RMER6C LTR ERVK 343 662 -28 2 1383 1046 168 49 15 chrX 104675273 104675478 -61974818 + B3 SINE B2 5 216 0 2 1383 2480 83 129 32 chrX 104675480 104675913 -61974383 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1383 24 53 0 0 chrX 104675913 104675951 -61974345 + AT_rich Low_complexity Low_complexity 1 38 0 2 1383 201 116 23 23 chrX 104676138 104676182 -61974114 + T-rich Low_complexity Low_complexity 4 47 0 2 1383 1561 274 5 39 chrX 104676217 104676657 -61973639 + Lx9 LINE L1 6809 7233 -411 2 1383 365 277 10 0 chrX 104676662 104676763 -61973533 + Lx7 LINE L1 7200 7301 -395 2 1383 246 285 34 27 chrX 104676777 104676925 -61973371 + Lx7 LINE L1 7533 7681 -15 2 1383 26559 142 32 25 chrX 104677774 104679320 -61970976 + L1_Mus4 LINE L1 377 1959 -3924 2 1383 594 92 0 0 chrX 104679320 104679407 -61970889 - B1_Mus2 SINE Alu -59 88 2 2 1383 26559 142 32 25 chrX 104679407 104682618 -61967678 + L1_Mus4 LINE L1 1960 5250 -633 2 1383 603 126 0 0 chrX 104682618 104682713 -61967583 + (TA)n Simple_repeat Simple_repeat 2 96 0 2 1383 26559 122 104 10 chrX 104682713 104683656 -61966640 + L1_Mus4 LINE L1 5251 6283 -353 2 1383 647 227 8 0 chrX 104683657 104683808 -61966488 + MT2A LTR ERVL 345 552 -49 2 1383 2091 258 32 18 chrX 104683809 104684428 -61965868 + Lx9 LINE L1 6823 7450 -194 2 1383 497 309 56 0 chrX 104684641 104684767 -61965529 + RSINE1 SINE B4 27 159 -6 2 1383 726 44 0 0 chrX 104685794 104685884 -61964412 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 2 1383 6009 246 77 18 chrX 104686200 104687642 -61962654 - Lx6 LINE L1 -11 7449 5903 2 1383 2009 20 159 0 chrX 104687642 104687894 -61962402 + RLTR10B LTR ERVK 1 292 0 2 1383 6009 246 77 18 chrX 104687894 104687996 -61962300 - Lx6 LINE L1 -1558 5902 5805 2 1383 1666 144 104 78 chrX 104687996 104688380 -61961916 + ORR1B1 LTR MaLR 1 394 0 2 1383 6009 246 77 18 chrX 104688380 104688449 -61961847 - Lx6 LINE L1 -1656 5804 5739 2 1383 2457 200 32 19 chrX 104688475 104688950 -61961346 - Lx4B LINE L1 0 7050 6570 3 1383 4151 152 17 1 chrX 104688949 104689796 -61960500 - Lx4B LINE L1 -745 6313 5444 3 1383 234 62 0 0 chrX 104689796 104689828 -61960468 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 3 1383 2060 172 37 15 chrX 104689829 104690279 -61960017 - Lx4B LINE L1 -17 7041 6502 3 1383 4217 161 27 59 chrX 104690383 104691246 -61959050 - Lx6 LINE L1 -127 5753 4919 2 1383 781 120 2 9 chrX 104691250 104691372 -61958924 + ORR1A3 LTR MaLR 218 421 0 3 1383 315 346 24 60 chrX 104691582 104691748 -61958548 + RMER4A LTR ERVK 4 163 -303 3 1383 331 177 0 0 chrX 104692120 104692182 -61958114 - RMER1C Other Other -2 1340 1279 3 1383 820 305 92 0 chrX 104692162 104692457 -61957839 - RMER1C Other Other -523 819 498 3 1383 1431 244 132 20 chrX 104692590 104693126 -61957170 - Lx9 LINE L1 -89 7555 6960 3 1383 307 294 59 0 chrX 104693312 104693431 -61956865 - Lx4B LINE L1 -5 7053 6928 3 1383 437 0 19 0 chrX 104693499 104693552 -61956744 + (TTTTG)n Simple_repeat Simple_repeat 3 56 0 3 1383 990 96 7 0 chrX 104693552 104693687 -61956609 - B1_Mus1 SINE Alu -11 137 2 3 1383 34516 71 8 19 chrX 104694197 104699411 -61950885 + L1Md_F3 LINE L1 446 5586 -297 3 1383 7739 53 5 1 chrX 104699411 104700391 -61949905 + L1Md_F3 LINE L1 5587 6570 -14 3 1383 297 0 0 0 chrX 104701518 104701551 -61948745 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1383 317 332 73 69 chrX 104702119 104702178 -61948118 - Lx7 LINE L1 -80 7393 7328 3 1383 243 0 0 0 chrX 104702178 104702205 -61948091 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 1383 515 298 34 55 chrX 104702205 104702442 -61947854 - Lx7 LINE L1 -146 7327 7084 3 1383 2450 150 35 103 chrX 104702594 104703159 -61947137 + RLTR24 LTR ERV1 1 527 -2 3 1383 185 356 23 11 chrX 104703460 104703548 -61946748 + L2c LINE L2 3293 3381 -6 3 1383 250 326 0 34 chrX 104703564 104703713 -61946583 + GA-rich Low_complexity Low_complexity 4 147 0 3 1383 31 26 0 0 chrX 104704748 104704786 -61945510 + AT_rich Low_complexity Low_complexity 1 38 0 3 1383 254 73 24 0 chrX 104704905 104704946 -61945350 + (CAATG)n Simple_repeat Simple_repeat 1 42 0 3 1383 369 266 85 0 chrX 104706102 104706196 -61944100 + PB1D10 SINE Alu 15 116 -1 3 1383 424 261 32 11 chrX 104707089 104707182 -61943114 + B3A SINE B2 34 128 -70 3 1383 10853 69 8 2 chrX 104708549 104710332 -61939964 - L1Md_F2 LINE L1 -362 6220 4423 3 1383 359 48 129 0 chrX 104710332 104710394 -61939902 + L1Md_F2 LINE L1 6511 6580 -2 3 1383 910 301 64 8 chrX 104710413 104710648 -61939648 + B4A SINE B4 3 250 -42 3 1383 1734 157 41 13 chrX 104710652 104710968 -61939328 - ORR1A4 LTR MaLR -4 325 1 3 1383 513 47 0 0 chrX 104711074 104711138 -61939158 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 1383 36394 38 0 3 chrX 104711463 104716387 -61933909 + L1Md_T LINE L1 722 5586 -297 3 1383 7975 58 0 0 chrX 104716387 104717437 -61932859 + L1Md_T LINE L1 5587 6582 0 3 1383 254 87 0 21 chrX 104718042 104718089 -61932207 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1383 449 34 17 0 chrX 104718322 104718381 -61931915 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 1383 180 0 0 0 chrX 104718381 104718400 -61931896 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 1383 39 0 0 0 chrX 104719304 104719343 -61930953 + AT_rich Low_complexity Low_complexity 1 39 0 3 1383 5328 68 0 6 chrX 104720475 104721170 -61929126 + L1Md_F2 LINE L1 5880 6570 -12 3 1383 210 360 50 29 chrX 104721825 104721965 -61928331 - MIRb SINE MIR -52 216 74 3 1383 409 252 37 30 chrX 104722622 104722786 -61927510 - L1MB8 LINE L1 -305 5873 5709 3 1383 346 201 95 88 chrX 104722794 104722909 -61927387 + RMER17B LTR ERVK 316 432 -526 3 1383 432 0 0 0 chrX 104722909 104722957 -61927339 + (TC)n Simple_repeat Simple_repeat 1 48 0 3 1383 346 201 95 88 chrX 104722957 104722988 -61927308 + RMER17B LTR ERVK 433 463 -495 3 1383 376 200 14 0 chrX 104723329 104723399 -61926897 - Lx2B LINE L1 -750 6250 6180 3 1383 757 230 173 1 chrX 104723399 104723621 -61926675 + Lx3C LINE L1 6729 6997 -3 3 1383 22 0 0 0 chrX 104724600 104724622 -61925674 + AT_rich Low_complexity Low_complexity 1 22 0 3 1383 671 302 134 25 chrX 104724693 104725169 -61925127 - Tigger6b DNA MER2_type -7 1590 1063 3 1383 250 366 56 10 chrX 104725255 104725451 -61924845 - Tigger6b DNA MER2_type -1247 350 146 3 1383 1458 67 10 0 chrX 104725472 104725666 -61924630 - L1_Mus2 LINE L1 -230 6336 6141 3 1383 1397 332 83 26 chrX 104725665 104726345 -61923951 - Lx8 LINE L1 -470 7003 6279 3 1383 330 132 15 0 chrX 104726345 104726413 -61923883 - Lx LINE L1 -1 6653 6585 3 1383 1397 332 83 26 chrX 104726413 104726523 -61923773 - Lx8 LINE L1 -1195 6278 6169 3 1384 24 32 0 0 chrX 104726648 104726679 -61923617 + AT_rich Low_complexity Low_complexity 1 31 0 3 1384 3365 196 9 3 chrX 104726896 104727585 -61922711 + L1Md_A LINE L1 441 1133 -5591 3 1384 33817 75 8 7 chrX 104727585 104731621 -61918675 + L1Md_F3 LINE L1 446 4481 -1402 3 1384 2883 79 99 2 chrX 104731621 104732054 -61918242 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1384 33817 52 2 2 chrX 104732054 104733164 -61917132 + L1Md_F3 LINE L1 4482 5585 -298 3 1384 7724 58 3 3 chrX 104733165 104734162 -61916134 + L1Md_F3 LINE L1 5587 6583 -1 3 1384 431 337 21 89 chrX 104734598 104734656 -61915640 + L1M2 LINE L1 4737 4793 -1350 3 1384 1331 102 5 5 chrX 104734656 104734843 -61915453 + B2_Mm2 SINE B2 2 188 -7 3 1384 431 337 21 89 chrX 104734843 104735120 -61915176 + L1M2 LINE L1 4794 5049 -1094 3 1384 5693 96 1 18 chrX 104735120 104736168 -61914128 + L1Md_A LINE L1 1035 2064 -3819 3 1384 528 250 38 8 chrX 104736249 104736382 -61913914 + B3 SINE B2 78 214 -2 3 1384 213 143 24 0 chrX 104736466 104736508 -61913788 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1384 42 0 0 0 chrX 104737593 104737635 -61912661 + AT_rich Low_complexity Low_complexity 1 42 0 3 1384 237 191 136 45 chrX 104737646 104737734 -61912562 - Lx4B LINE L1 -4 7054 6959 3 1384 7578 48 25 10 chrX 104739185 104739889 -61910407 - L1_Mus1 LINE L1 0 6567 5849 3 1384 3227 53 2 2 chrX 104739889 104740285 -61910011 - MTA_Mm LTR MaLR 0 396 1 3 1384 7578 80 9 8 chrX 104740285 104741208 -61909088 - L1_Mus1 LINE L1 -719 5848 4924 3 1384 633 88 0 10 chrX 104742027 104742174 -61908122 - L1_Mus4 LINE L1 0 6636 6524 3 1384 449 143 0 23 chrX 104742174 104742260 -61908036 + GA-rich Low_complexity Low_complexity 3 86 0 3 1384 1346 103 18 45 chrX 104742261 104742485 -61907811 + MTB LTR MaLR 183 400 0 3 1384 538 98 0 11 chrX 104742868 104742961 -61907335 - L1_Mus2 LINE L1 -2 6564 6473 3 1384 2208 92 0 0 chrX 104742963 104743255 -61907041 - L1_Mus2 LINE L1 -385 6181 5890 3 1384 20339 114 38 5 chrX 104743253 104743892 -61906404 - L1_Mus1 LINE L1 -586 5297 4632 3 1384 1022 102 0 33 chrX 104743892 104744044 -61906252 - B1_Mus1 SINE Alu 0 148 2 3 1384 20339 114 38 5 chrX 104744044 104746683 -61903613 - L1_Mus1 LINE L1 -1252 4631 1912 3 1384 441 0 0 0 chrX 104746949 104746998 -61903298 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 1384 744 132 118 0 chrX 104747145 104747281 -61903015 + L1_Mur2 LINE L1 145 296 -6416 3 1384 823 197 9 106 chrX 104747282 104747509 -61902787 + RMER5 LTR ERV1 292 496 -38 3 1384 2533 117 5 0 chrX 104747590 104747966 -61902330 - Lx3_Mus LINE L1 -601 6408 6031 3 1384 2695 46 65 8 chrX 104747966 104748319 -61901977 - L1Md_F3 LINE L1 -14 6570 6198 3 1384 549 379 4 48 chrX 104748320 104748572 -61901724 + MER67D LTR ERV1 175 415 -99 3 1384 1779 24 5 0 chrX 104748586 104748795 -61901501 + L1Md_F3 LINE L1 5962 6171 -413 3 1384 3414 62 18 0 chrX 104748791 104748916 -61901380 - Lx3_Mus LINE L1 -968 6041 5917 3 1384 207 0 0 0 chrX 104748916 104748939 -61901357 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1384 3414 62 18 0 chrX 104748939 104749251 -61901045 - Lx3_Mus LINE L1 -1093 5916 5597 3 1384 239 326 75 34 chrX 104749251 104749341 -61900955 - RMER17C LTR ERVK -256 154 59 3 1384 252 0 0 0 chrX 104749341 104749369 -61900927 + (GA)n Simple_repeat Simple_repeat 1 28 0 3 1384 239 326 75 34 chrX 104749369 104749424 -61900872 - RMER17C LTR ERVK -352 58 4 3 1384 1389 312 22 20 chrX 104749646 104750091 -61900205 - Lx9 LINE L1 -717 6927 6482 3 1384 802 198 9 90 chrX 104750491 104750702 -61899594 - RMER5 LTR ERV1 -38 496 303 3 1384 744 132 118 0 chrX 104750719 104750855 -61899441 - L1_Mur2 LINE L1 -6416 296 145 3 1384 225 0 0 0 chrX 104751002 104751027 -61899269 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 1384 636 197 63 0 chrX 104751560 104751687 -61898609 + B1_Mur4 SINE Alu 16 150 0 3 1384 664 277 67 0 chrX 104754118 104754313 -61895983 - B3 SINE B2 -8 208 1 3 1384 459 0 0 0 chrX 104755230 104755281 -61895015 + (CTA)n Simple_repeat Simple_repeat 2 52 0 3 1384 4445 191 67 23 chrX 104756411 104757408 -61892888 - Lx9 LINE L1 -3 7641 6601 3 1384 425 320 0 0 chrX 104757422 104757522 -61892774 + B1F SINE Alu 12 111 -38 3 1384 294 323 70 10 chrX 104757968 104758068 -61892228 - MLT1I LTR MaLR -24 387 282 3 1384 189 337 107 32 chrX 104758397 104758551 -61891745 - MIRc SINE MIR -75 193 26 3 1384 1770 221 71 5 chrX 104758931 104759313 -61890983 - MTD LTR MaLR 0 419 13 3 1384 297 309 102 8 chrX 104759377 104759504 -61890792 + MLT1A1 LTR MaLR 122 260 -148 3 1384 246 282 36 71 chrX 104759579 104759663 -61890633 + LTR58 LTR ERV1 83 163 -516 3 1384 333 356 87 14 chrX 104759711 104759930 -61890366 - MIRb SINE MIR -24 244 10 3 1384 24 0 0 0 chrX 104760090 104760114 -61890182 + AT_rich Low_complexity Low_complexity 1 24 0 3 1384 24 53 0 0 chrX 104760759 104760797 -61889499 + AT_rich Low_complexity Low_complexity 1 38 0 3 1384 366 202 21 11 chrX 104760936 104761031 -61889265 + Lx9 LINE L1 7303 7398 -246 3 1384 418 353 67 56 chrX 104761152 104761419 -61888877 - B4 SINE B4 -19 273 4 3 1384 324 102 0 0 chrX 104761529 104761578 -61888718 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 3 1384 242 258 33 22 chrX 104761608 104761699 -61888597 + GA-rich Low_complexity Low_complexity 2 93 0 3 1384 307 200 0 59 chrX 104762564 104762665 -61887631 - Lx4B LINE L1 0 7058 6964 3 1384 307 294 82 20 chrX 104763415 104763561 -61886735 - MIRc SINE MIR -57 211 57 3 1384 184 338 27 73 chrX 104763767 104763917 -61886379 + L2c LINE L2 3120 3262 -125 3 1384 492 306 19 67 chrX 104764305 104764515 -61885781 - Lx8 LINE L1 -705 6768 6569 3 1384 197 265 0 0 chrX 104765071 104765120 -61885176 - MIRc SINE MIR -27 241 193 3 1384 3717 75 4 4 chrX 104766205 104766700 -61883596 + L1Md_F2 LINE L1 6080 6574 -8 3 1384 711 233 20 45 chrX 104766986 104767184 -61883112 + RLTR42-int LTR ERVK 1134 1326 -4196 4 1384 2230 278 100 33 chrX 104767706 104768528 -61881768 + Lx8 LINE L1 6588 7464 -9 4 1384 343 333 93 41 chrX 104768556 104768825 -61881471 + L2a LINE L2 3056 3338 -88 4 1384 3442 111 11 2 chrX 104769253 104769775 -61880521 - L1_Mus3 LINE L1 0 6638 6112 4 1384 797 57 0 0 chrX 104769776 104769881 -61880415 + L1_Mus4 LINE L1 5944 6048 -588 4 1384 241 283 63 91 chrX 104770727 104770902 -61879394 - L1MD2 LINE L1 -116 6243 6074 4 1384 273 89 0 0 chrX 104771466 104771511 -61878785 + (GA)n Simple_repeat Simple_repeat 1 45 0 4 1384 432 326 110 33 chrX 104771730 104772321 -61877975 - L1MEf LINE L1 -5007 1495 863 4 1384 1019 184 36 31 chrX 104772747 104772971 -61877325 - URR1B DNA MER1_type 0 225 1 4 1384 294 125 0 0 chrX 104773436 104773484 -61876812 + (TCC)n Simple_repeat Simple_repeat 2 49 0 4 1384 1530 342 44 55 chrX 104774013 104775027 -61875269 + Lx7 LINE L1 6312 7314 -382 4 1384 1097 241 119 22 chrX 104775696 104776002 -61874294 + ORR1D1 LTR MaLR 1 311 -63 4 1384 2631 260 55 17 chrX 104776004 104776639 -61873657 - Lx6 LINE L1 -26 7434 6776 4 1384 570 246 14 28 chrX 104776689 104776831 -61873465 - ORR1D1 LTR MaLR -1 373 234 4 1384 633 139 9 9 chrX 104776830 104776939 -61873357 - ORR1D1 LTR MaLR -263 111 3 4 1384 4900 252 66 26 chrX 104776941 104778214 -61872082 - ORR1D1-int LTR MaLR 0 1370 47 4 1384 1059 234 179 25 chrX 104778242 104778566 -61871730 - ORR1D1 LTR MaLR 0 374 1 4 1384 24 0 0 0 chrX 104778677 104778701 -61871595 + AT_rich Low_complexity Low_complexity 1 24 0 4 1384 2571 142 186 30 chrX 104778976 104779573 -61870723 - RMER6C LTR ERVK 0 690 1 4 1384 207 234 209 27 chrX 104779575 104779685 -61870611 - MIR SINE MIR -61 201 72 4 1384 1153 135 11 10 chrX 104780014 104780239 -61870057 + Lx2B LINE L1 5651 5875 -1125 4 1384 3649 168 3 5 chrX 104780239 104780867 -61869429 + Lx2B LINE L1 6372 6998 -2 4 1384 546 254 55 87 chrX 104781399 104781688 -61868608 - L1MB7 LINE L1 -1 6183 5904 4 1384 261 352 2 19 chrX 104781700 104781815 -61868481 + PB1D9 SINE Alu 1 114 -6 4 1384 290 298 183 20 chrX 104781984 104782279 -61868017 - L1MB7 LINE L1 -525 5649 5307 4 1384 301 71 0 0 chrX 104782343 104782385 -61867911 + RLTR10B LTR ERVK 1 42 -250 4 1384 1993 42 0 118 chrX 104782407 104782729 -61867567 + RLTR10B LTR ERVK 9 292 0 4 1384 230 277 12 0 chrX 104782770 104782853 -61867443 - L1MB7 LINE L1 -917 5229 5146 4 1384 446 342 101 61 chrX 104783055 104783529 -61866767 - Lx8 LINE L1 -7 7466 6974 4 1384 216 67 0 0 chrX 104783713 104783743 -61866553 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1384 450 300 26 43 chrX 104783765 104783880 -61866416 - RSINE1 SINE B4 -36 129 17 4 1384 437 324 63 16 chrX 104783893 104784257 -61866039 - L1MB7 LINE L1 -1088 5052 4672 4 1384 2075 218 27 12 chrX 104784251 104784732 -61865564 + Lx6 LINE L1 6290 6730 -730 4 1384 612 0 0 0 chrX 104784734 104784802 -61865494 + (GA)n Simple_repeat Simple_repeat 2 69 0 4 1384 226 189 0 36 chrX 104784802 104784817 -61865479 + polypurine Low_complexity Low_complexity 2 16 0 4 1384 906 122 0 0 chrX 104784817 104784997 -61865299 + (GGA)n Simple_repeat Simple_repeat 1 180 0 4 1384 773 165 0 20 chrX 104784997 104785084 -61865212 + polypurine Low_complexity Low_complexity 1 85 0 4 1384 1041 106 0 0 chrX 104785084 104785264 -61865032 + (GGA)n Simple_repeat Simple_repeat 1 180 0 4 1384 773 145 0 6 chrX 104785264 104785396 -61864900 + GA-rich Low_complexity Low_complexity 49 180 0 4 1384 1713 225 90 0 chrX 104785436 104785792 -61864504 + Lx6 LINE L1 6884 7271 -189 4 1384 31 76 0 0 chrX 104785858 104785924 -61864372 + AT_rich Low_complexity Low_complexity 1 66 0 4 1384 277 139 0 0 chrX 104786034 104786077 -61864219 + ORR1A1 LTR MaLR 1 43 -284 4 1384 9864 97 7 81 chrX 104786088 104788625 -61861671 - L1_Mus1 LINE L1 0 6567 4253 4 1384 5321 116 0 28 chrX 104788622 104789539 -61860757 - L1_Mus1 LINE L1 -3777 2106 1216 4 1384 17625 63 1 0 chrX 104789532 104792523 -61857773 - L1Md_F2 LINE L1 0 6582 3589 4 1384 1481 174 6 178 chrX 104792523 104792729 -61857567 - L1Md_F LINE L1 -5429 1131 966 4 1384 732 116 0 21 chrX 104792729 104792870 -61857426 - L1Md_F2 LINE L1 -5 6577 6440 4 1384 2547 162 13 109 chrX 104792870 104793517 -61856779 - L1Md_F LINE L1 -5595 965 413 4 1384 2775 92 16 3 chrX 104793519 104793899 -61856397 - IAPEY_LTR LTR ERVK 0 385 1 4 1384 823 214 0 19 chrX 104793913 104794075 -61856221 + ORR1A1 LTR MaLR 11 169 -177 4 1384 3038 159 4 0 chrX 104794075 104794589 -61855707 - L1_Mur2 LINE L1 -1062 4815 4300 4 1384 5270 220 34 10 chrX 104794584 104795717 -61854579 + Lx5 LINE L1 5890 7049 -1 4 1384 361 382 23 12 chrX 104795859 104796031 -61854265 - MER45B DNA Tip100 -866 174 1 4 1384 372 43 0 0 chrX 104796665 104796711 -61853585 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1384 366 357 70 0 chrX 104797048 104797247 -61853049 + B3 SINE B2 4 216 0 4 1384 35312 35 1 0 chrX 104797330 104803023 -61847273 + L1Md_Gf LINE L1 1 5589 -297 4 1384 8948 7 0 0 chrX 104803023 104804019 -61846277 + L1Md_T LINE L1 5587 6582 0 4 1384 877 262 99 36 chrX 104804063 104804152 -61846144 - L1MA6 LINE L1 -124 6176 6067 4 1384 216 0 0 0 chrX 104804152 104804176 -61846120 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1384 877 262 99 36 chrX 104804176 104804212 -61846084 - L1MA6 LINE L1 -234 6066 6038 4 1384 1146 279 32 29 chrX 104804212 104804588 -61845708 - MTEb LTR MaLR -2 377 1 4 1384 877 262 99 36 chrX 104804588 104804904 -61845392 - L1MA6 LINE L1 -263 6037 5707 4 1384 1291 204 58 0 chrX 104804966 104805240 -61845056 - Lx9 LINE L1 -561 7083 6794 4 1384 781 208 218 13 chrX 104805239 104805478 -61844818 + Lx9 LINE L1 7349 7636 -8 4 1384 3180 294 43 15 chrX 104805569 104806582 -61843714 + Lx7 LINE L1 6250 7291 -405 4 1384 229 420 17 17 chrX 104807252 104807424 -61842872 + MIRc SINE MIR 15 186 -82 4 1384 310 233 146 0 chrX 104808181 104808284 -61842012 + PB1D9 SINE Alu 2 119 -1 4 1384 252 254 0 0 chrX 104808304 104808371 -61841925 + CT-rich Low_complexity Low_complexity 1 67 0 4 1384 357 252 0 0 chrX 104808373 104808458 -61841838 + B1_Mur1 SINE Alu 58 144 -5 4 1384 531 330 14 67 chrX 104808475 104808683 -61841613 - B3A SINE B2 0 198 2 4 1384 4119 109 35 5 chrX 104809079 104809195 -61841101 - Lx LINE L1 0 6654 6518 4 1384 180 0 0 0 chrX 104809195 104809215 -61841081 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 4 1384 4119 109 35 5 chrX 104809215 104809706 -61840590 - Lx LINE L1 -137 6517 6029 4 1384 841 256 57 84 chrX 104810075 104810374 -61839922 + B4 SINE B4 2 292 0 4 1384 412 359 40 73 chrX 104811635 104811938 -61838358 + L2 LINE L2 2706 2998 -421 4 1384 787 255 45 0 chrX 104812117 104812346 -61837950 + L1Md_T LINE L1 5535 5811 -771 4 1384 1306 125 22 4 chrX 104813090 104813315 -61836981 + Lx3_Mus LINE L1 6781 7009 0 4 1384 378 0 0 0 chrX 104813482 104813524 -61836772 + (TAA)n Simple_repeat Simple_repeat 2 43 0 4 1384 279 304 49 0 chrX 104813575 104813677 -61836619 + L1M4b LINE L1 2088 2194 -5140 4 1384 1351 85 37 0 chrX 104813734 104813922 -61836374 - B2_Mm2 SINE B2 0 195 1 4 1384 576 253 153 10 chrX 104813940 104814141 -61836155 - MTEa LTR MaLR -2 377 121 4 1384 3914 169 40 19 chrX 104814143 104814971 -61835325 + L1_Mur3 LINE L1 2486 3330 -2550 4 1384 1440 211 21 52 chrX 104814971 104815296 -61835000 - ORR1C1 LTR MaLR 0 378 64 4 1384 6050 155 40 16 chrX 104815325 104816382 -61833914 + L1_Mur3 LINE L1 3325 4422 -1458 4 1384 1102 91 54 43 chrX 104816382 104816566 -61833730 + B2_Mm2 SINE B2 1 186 -9 4 1384 6050 155 40 16 chrX 104816566 104816685 -61833611 + L1_Mur3 LINE L1 4423 4529 -1351 4 1384 4082 178 48 35 chrX 104816684 104816999 -61833297 - Lx5 LINE L1 -604 6446 6148 4 1384 4437 69 37 3 chrX 104816999 104817598 -61832698 - L1Md_F2 LINE L1 0 6582 5964 4 1384 4082 148 39 27 chrX 104817598 104818416 -61831880 - Lx5 LINE L1 -903 6147 5305 4 1384 23 0 0 0 chrX 104818474 104818497 -61831799 + AT_rich Low_complexity Low_complexity 1 23 0 4 1384 21 0 0 0 chrX 104818840 104818861 -61831435 + AT_rich Low_complexity Low_complexity 1 21 0 4 1384 674 176 20 60 chrX 104819652 104819803 -61830493 - B1_Mus1 SINE Alu -2 146 2 4 1384 378 0 0 0 chrX 104819815 104819857 -61830439 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 4 1384 784 174 242 0 chrX 104819858 104820019 -61830277 - B3 SINE B2 -14 202 3 4 1384 237 242 83 0 chrX 104820585 104820703 -61829593 + L1MA9 LINE L1 5815 5939 -373 4 1384 41 58 0 0 chrX 104820783 104820852 -61829444 + AT_rich Low_complexity Low_complexity 1 69 0 4 1384 201 39 0 0 chrX 104820927 104820953 -61829343 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 4 1384 12827 115 43 17 chrX 104820954 104824176 -61826120 - Lx3_Mus LINE L1 -2772 3114 16 4 1384 508 326 81 25 chrX 104824332 104824766 -61825530 + L1MD LINE L1 3036 3488 -2658 4 1384 2611 110 8 5 chrX 104824772 104825164 -61825132 - L1_Mus3 LINE L1 0 6638 6246 4 1384 349 325 88 8 chrX 104825173 104825412 -61824884 + L1MD LINE L1 4093 4350 -1796 4 1384 728 216 71 96 chrX 104825415 104825773 -61824523 + Lx6 LINE L1 5934 6260 -1200 4 1384 31071 85 6 1 chrX 104825772 104830970 -61819326 + L1Md_F2 LINE L1 360 5586 -297 4 1384 7670 60 2 9 chrX 104830971 104831960 -61818336 + L1Md_F2 LINE L1 5588 6569 -13 4 1384 2679 255 82 4 chrX 104831961 104832957 -61817339 + Lx6 LINE L1 6252 7325 -135 4 1384 198 150 0 0 chrX 104833078 104833118 -61817178 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 4 1384 2726 118 9 20 chrX 104833120 104833562 -61816734 - L1_Mus3 LINE L1 0 6638 6202 4 1384 950 257 77 15 chrX 104833573 104833900 -61816396 - Lx3C LINE L1 0 7000 6641 4 1384 4552 99 25 19 chrX 104833905 104834731 -61815565 - L1_Mus3 LINE L1 -9 6629 5732 4 1384 598 158 39 0 chrX 104834731 104834858 -61815438 + Lx7 LINE L1 7565 7696 0 4 1384 14016 77 1 9 chrX 104835409 104837239 -61813057 + L1Md_F LINE L1 349 2162 -3721 4 1384 3528 17 0 0 chrX 104837239 104837643 -61812653 + L1Md_A LINE L1 6179 6582 0 4 1384 14016 86 1 17 chrX 104837643 104838720 -61811576 + L1Md_F LINE L1 2163 3224 -2659 4 1384 5096 49 2 6 chrX 104838726 104839366 -61810930 + L1Md_F2 LINE L1 5946 6582 0 4 1384 390 331 113 55 chrX 104840287 104840763 -61809533 - L2 LINE L2 -2159 1260 757 4 1384 1192 280 117 38 chrX 104840869 104841138 -61809158 - Lx8 LINE L1 -3 7470 7196 4 1384 531 189 368 12 chrX 104841138 104841304 -61808992 - URR1B DNA MER1_type 0 225 1 4 1384 1192 280 117 38 chrX 104841304 104841506 -61808790 - Lx8 LINE L1 -278 7195 6962 4 1384 29 47 0 0 chrX 104841839 104841882 -61808414 + AT_rich Low_complexity Low_complexity 1 43 0 4 1384 23 0 0 0 chrX 104842044 104842067 -61808229 + AT_rich Low_complexity Low_complexity 1 23 0 4 1384 370 273 102 18 chrX 104842089 104842306 -61807990 + L1MD LINE L1 4751 4981 -1165 4 1384 3477 18 2 0 chrX 104842315 104842710 -61807586 - MTA_Mm LTR MaLR 0 396 1 4 1384 9054 35 4 1 chrX 104842710 104843805 -61806491 - MTA_Mm-int LTR MaLR 0 1098 1 4 1384 3477 18 2 0 chrX 104843805 104844200 -61806096 - MTA_Mm LTR MaLR 0 396 1 4 1384 315 336 73 33 chrX 104844224 104844498 -61805798 + L1MD LINE L1 4985 5269 -877 4 1384 246 343 69 29 chrX 104844599 104844637 -61805659 + L1MD LINE L1 5345 5384 -858 4 1384 918 30 22 22 chrX 104844637 104844773 -61805523 + L1Md_F3 LINE L1 6448 6583 -1 5 1384 246 343 69 29 chrX 104844773 104845010 -61805286 + L1MD LINE L1 5385 5631 -611 4 1384 663 278 24 12 chrX 104845017 104845181 -61805115 + B3 SINE B2 51 216 0 5 1384 242 211 0 0 chrX 104845224 104845276 -61805020 + L1M3 LINE L1 5009 5060 -1080 5 1384 1131 97 243 0 chrX 104845461 104845667 -61804629 - Lx2 LINE L1 -1 6996 6741 5 1384 2076 107 109 3 chrX 104845668 104846007 -61804289 + Lx2B LINE L1 6336 6710 -290 5 1384 312 339 85 30 chrX 104846010 104846462 -61803834 + L1ME2 LINE L1 5265 5755 -409 5 1384 3024 48 0 0 chrX 104846462 104846835 -61803461 - L1_Mus1 LINE L1 0 6567 6195 5 1384 307 352 119 41 chrX 104846835 104847217 -61803079 + L1ME2 LINE L1 5756 6163 -1 5 1384 213 39 0 0 chrX 104847492 104847518 -61802778 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 1384 25 31 0 0 chrX 104848075 104848107 -61802189 + AT_rich Low_complexity Low_complexity 1 32 0 5 1384 1517 54 0 0 chrX 104848116 104848301 -61801995 - B2_Mm1t SINE B2 -7 186 2 5 1384 18515 81 23 8 chrX 104848308 104851562 -61798734 - L1Md_F2 LINE L1 -12 6570 3268 5 1384 1405 161 8 21 chrX 104851828 104852069 -61798227 + Lx4A LINE L1 6694 6931 -127 5 1384 1174 297 12 9 chrX 104852079 104852409 -61797887 + Lx8 LINE L1 7004 7334 -139 5 1384 27 29 0 0 chrX 104854075 104854109 -61796187 + AT_rich Low_complexity Low_complexity 1 34 0 5 1384 28 0 0 0 chrX 104854598 104854626 -61795670 + AT_rich Low_complexity Low_complexity 1 28 0 5 1384 1676 214 21 73 chrX 104855670 104856042 -61794254 - MTD LTR MaLR -2 417 65 5 1384 23 0 0 0 chrX 104856261 104856284 -61794012 + AT_rich Low_complexity Low_complexity 1 23 0 5 1384 258 296 125 0 chrX 104856332 104856420 -61793876 - MIRc SINE MIR -56 212 114 5 1384 21 36 0 0 chrX 104856912 104856940 -61793356 + AT_rich Low_complexity Low_complexity 1 28 0 5 1384 22 56 0 0 chrX 104856992 104857028 -61793268 + AT_rich Low_complexity Low_complexity 1 36 0 5 1385 436 59 0 29 chrX 104858513 104858583 -61791713 + (TA)n Simple_repeat Simple_repeat 2 69 0 5 1385 25 51 0 0 chrX 104858601 104858640 -61791656 + AT_rich Low_complexity Low_complexity 1 39 0 5 1385 31 0 0 0 chrX 104858774 104858805 -61791491 + AT_rich Low_complexity Low_complexity 1 31 0 5 1385 425 75 0 0 chrX 104859036 104859103 -61791193 - L1Md_F2 LINE L1 -1 6581 6515 5 1385 422 226 51 17 chrX 104859335 104859452 -61790844 + Lx7 LINE L1 6066 6186 -1510 5 1385 3061 245 67 9 chrX 104859468 104860260 -61790036 + Lx7 LINE L1 6595 7432 -264 5 1385 387 0 0 0 chrX 104861539 104861582 -61788714 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1385 21 0 0 0 chrX 104862662 104862683 -61787613 + AT_rich Low_complexity Low_complexity 1 21 0 5 1385 879 157 173 0 chrX 104863656 104863847 -61786449 + URR1B DNA MER1_type 1 224 -1 5 1385 199 118 78 0 chrX 104864558 104864609 -61785687 + (CAGAGA)n Simple_repeat Simple_repeat 2 56 0 5 1385 222 37 0 0 chrX 104864980 104865007 -61785289 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1385 973 146 67 0 chrX 104865025 104865203 -61785093 + B2_Mm2 SINE B2 3 192 -3 5 1385 679 282 18 47 chrX 104865361 104865532 -61784764 + B3A SINE B2 2 167 -31 5 1385 1287 217 17 0 chrX 104865680 104865915 -61784381 - Lx6 LINE L1 -328 7132 6894 5 1385 1277 239 30 24 chrX 104865916 104866254 -61784042 + Lx6 LINE L1 7121 7460 0 5 1385 241 189 0 0 chrX 104867207 104867262 -61783034 - L1MA6 LINE L1 -21 6279 6225 5 1385 21 0 0 0 chrX 104867720 104867741 -61782555 + AT_rich Low_complexity Low_complexity 1 21 0 5 1385 212 309 0 0 chrX 104868439 104868494 -61781802 - MIRb SINE MIR -34 234 180 5 1385 225 0 0 0 chrX 104870137 104870162 -61780134 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1385 772 73 53 61 chrX 104870818 104870949 -61779347 + B1_Mm SINE Alu 18 147 0 5 1385 232 25 75 0 chrX 104870956 104870996 -61779300 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 5 1385 218 200 0 0 chrX 104875228 104875268 -61775028 + (TTTG)n Simple_repeat Simple_repeat 3 42 0 5 1385 353 118 12 0 chrX 104875955 104876017 -61774279 - RMER1A Other Other -228 838 727 5 1385 293 146 0 0 chrX 104876004 104876045 -61774251 + RMER1A Other Other 704 744 -286 5 1385 390 271 121 0 chrX 104877915 104878122 -61772174 + L1MEc LINE L1 1948 2179 -4221 5 1385 597 317 103 11 chrX 104878206 104878573 -61771723 - L1MA6 LINE L1 -5 6295 5895 5 1385 967 159 116 29 chrX 104879350 104879557 -61770739 - URR1A DNA MER1_type 0 226 2 5 1385 228 146 48 24 chrX 104879799 104879883 -61770413 + (TA)n Simple_repeat Simple_repeat 1 86 0 5 1385 408 40 0 0 chrX 104881134 104881184 -61769112 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1385 270 136 0 0 chrX 104881551 104881595 -61768701 + (TATATG)n Simple_repeat Simple_repeat 5 48 0 5 1385 22 35 0 0 chrX 104884256 104884285 -61766011 + AT_rich Low_complexity Low_complexity 1 29 0 5 1385 22 35 0 0 chrX 104884809 104884838 -61765458 + AT_rich Low_complexity Low_complexity 1 29 0 5 1385 2223 248 135 107 chrX 104884839 104885791 -61764505 - Lx6 LINE L1 -32 7428 6227 5 1385 257 270 14 0 chrX 104886124 104886198 -61764098 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 1385 282 259 103 36 chrX 104886553 104886791 -61763505 - L1MA6 LINE L1 -12 6285 6026 5 1385 391 253 34 51 chrX 104886938 104887113 -61763183 - L1M2 LINE L1 -1582 4561 4390 5 1385 254 289 0 84 chrX 104887114 104887197 -61763099 - ID_B1 SINE B4 -4 220 145 5 1385 370 304 0 42 chrX 104887123 104887219 -61763077 - B1F SINE Alu -13 136 45 5 1385 5991 209 43 22 chrX 104887227 104887675 -61762621 - Lx5 LINE L1 -1 7049 6601 5 1385 207 0 0 0 chrX 104887675 104887698 -61762598 + (CCCA)n Simple_repeat Simple_repeat 1 23 0 5 1385 5991 207 42 21 chrX 104887698 104888576 -61761720 - Lx5 LINE L1 -450 6600 5685 5 1385 356 263 45 13 chrX 104888605 104888759 -61761537 - L1M2 LINE L1 -1748 4395 4237 5 1385 414 0 0 0 chrX 104888760 104888806 -61761490 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1385 2499 60 0 0 chrX 104889092 104889407 -61760889 + L1Md_F2 LINE L1 5272 5586 -297 5 1385 8501 26 1 0 chrX 104889407 104890388 -61759908 + L1Md_F2 LINE L1 5587 6568 -14 5 1385 198 0 0 0 chrX 104890392 104890414 -61759882 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 5 1385 488 316 79 31 chrX 104890430 104890884 -61759412 - L1M2 LINE L1 -2065 4078 3603 5 1385 899 294 66 39 chrX 104890899 104891337 -61758959 - L1M4 LINE L1 -361 5817 5368 5 1385 321 255 63 32 chrX 104891330 104891488 -61758808 - L1M4 LINE L1 -1465 4681 4519 5 1385 692 292 106 41 chrX 104891598 104892522 -61757774 - L1M4 LINE L1 -2088 4058 3075 5 1385 432 271 18 27 chrX 104894250 104894360 -61755936 - PB1D10 SINE Alu 0 117 9 5 1385 23 33 0 0 chrX 104894667 104894697 -61755599 + AT_rich Low_complexity Low_complexity 1 30 0 5 1385 556 321 62 6 chrX 104894843 104895003 -61755293 + B4A SINE B4 39 207 -85 5 1385 369 0 0 0 chrX 104895045 104895086 -61755210 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1385 492 18 0 0 chrX 104895086 104895142 -61755154 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 1385 2454 79 92 49 chrX 104896436 104896847 -61753449 + L1_Mus2 LINE L1 6137 6565 -1 5 1385 284 256 0 34 chrX 104897194 104897283 -61753013 - Lx9 LINE L1 -172 7472 7387 5 1385 317 24 24 0 chrX 104897397 104897439 -61752857 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 1385 5539 39 1 1 chrX 104897440 104898105 -61752191 - L1Md_F2 LINE L1 -17 6565 5901 5 1385 699 219 79 79 chrX 104898106 104898334 -61751962 - Lx9 LINE L1 -456 7188 6961 5 1385 239 359 45 8 chrX 104898338 104898470 -61751826 + MIRb SINE MIR 113 249 -19 5 1385 238 333 0 0 chrX 104898920 104899001 -61751295 + ID2 SINE ID 3 83 0 5 1385 307 323 10 29 chrX 104901832 104901934 -61748362 - B4A SINE B4 -191 101 2 5 1385 270 0 0 0 chrX 104904173 104904203 -61746093 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1385 420 20 0 0 chrX 104904762 104904811 -61745485 + (TTG)n Simple_repeat Simple_repeat 2 50 0 5 1385 1213 161 71 5 chrX 104905128 104905340 -61744956 - URR1A DNA MER1_type 0 226 1 5 1385 269 325 77 35 chrX 104906807 104906976 -61743320 - MER5A DNA MER1_type -1 188 13 5 1385 279 0 0 0 chrX 104907078 104907109 -61743187 + (TTA)n Simple_repeat Simple_repeat 2 32 0 5 1385 320 250 30 10 chrX 104907112 104907213 -61743083 + L1MA10 LINE L1 6216 6318 -16 5 1385 614 159 6 79 chrX 104907816 104907993 -61742303 + Lx3C LINE L1 6806 6969 -7 5 1385 1929 142 3 10 chrX 104908030 104908343 -61741953 + Lx4A LINE L1 6746 7056 -2 5 1385 194 429 36 0 chrX 104908777 104908889 -61741407 + MIR3 SINE MIR 41 156 -52 5 1385 278 282 45 114 chrX 104909096 104909141 -61741155 + ID4_ SINE ID 2 45 -38 5 1385 1847 215 31 26 chrX 104909141 104909556 -61740740 - MTD LTR MaLR -2 417 1 5 1385 278 282 45 114 chrX 104909556 104909598 -61740698 + ID4_ SINE ID 46 83 0 5 1385 580 342 57 5 chrX 104909786 104909980 -61740316 + B4A SINE B4 4 207 -85 5 1385 994 305 132 14 chrX 104910102 104910684 -61739612 + Lx8 LINE L1 6817 7467 -6 5 1385 231 369 23 8 chrX 104911052 104911183 -61739113 + MIRb SINE MIR 109 241 -27 5 1385 246 95 0 0 chrX 104912163 104912205 -61738091 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 5 1385 22 0 0 0 chrX 104912855 104912877 -61737419 + AT_rich Low_complexity Low_complexity 1 22 0 5 1385 254 327 53 47 chrX 104913023 104913193 -61737103 + L2a LINE L2 2484 2654 -765 5 1385 1055 51 80 0 chrX 104913228 104913365 -61736931 - B1_Mus1 SINE Alu 0 148 1 5 1385 201 305 110 34 chrX 104913979 104914125 -61736171 + L2a LINE L2 3205 3361 -65 5 1385 772 136 20 0 chrX 104914184 104914331 -61735965 + GA-rich Low_complexity Low_complexity 3 152 0 5 1385 24 53 0 0 chrX 104914443 104914481 -61735815 + AT_rich Low_complexity Low_complexity 1 38 0 5 1385 2187 81 48 27 chrX 104914563 104914893 -61735403 - L1Md_F2 LINE L1 -2 6580 6244 5 1385 1155 89 84 0 chrX 104915684 104915863 -61734433 + L1Md_F2 LINE L1 6388 6581 -1 5 1385 180 0 0 0 chrX 104915964 104915984 -61734312 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1385 202 328 0 0 chrX 104916073 104916140 -61734156 - L2a LINE L2 0 3426 3360 5 1385 325 299 34 11 chrX 104916431 104916519 -61733777 + ID_B1 SINE B4 82 171 -53 5 1385 525 250 19 0 chrX 104916442 104916546 -61733750 + PB1D10 SINE Alu 12 117 0 5 1385 184 133 85 43 chrX 104917812 104917859 -61732437 + L2b LINE L2 3312 3360 -15 6 1385 831 113 13 47 chrX 104917960 104918109 -61732187 - L1_Mus1 LINE L1 -1 6566 6423 6 1385 368 314 31 49 chrX 104918109 104918275 -61732021 + MER5A DNA MER1_type 4 166 0 6 1385 228 286 314 6 chrX 104919579 104919748 -61730548 - MIRb SINE MIR -10 258 38 6 1385 664 384 38 42 chrX 104920550 104921053 -61729243 - MLT1F2 LTR MaLR -59 501 1 6 1385 855 271 0 45 chrX 104921325 104921526 -61728770 + B3A SINE B2 1 192 -6 6 1385 448 321 66 0 chrX 104921880 104922017 -61728279 + MLT1A0 LTR MaLR 18 163 -202 6 1385 1921 153 0 58 chrX 104922655 104923001 -61727295 + ORR1A3 LTR MaLR 1 326 0 6 1385 26 0 0 0 chrX 104923243 104923269 -61727027 + AT_rich Low_complexity Low_complexity 1 26 0 6 1385 30 83 0 0 chrX 104923323 104923395 -61726901 + AT_rich Low_complexity Low_complexity 1 72 0 6 1385 1862 143 20 58 chrX 104924201 104924543 -61725753 - ORR1A4 LTR MaLR 0 329 1 6 1385 585 0 0 0 chrX 104924575 104924640 -61725656 + (CAAAT)n Simple_repeat Simple_repeat 2 66 0 6 1385 1224 266 30 0 chrX 104924906 104925177 -61725119 + RMER1B Other Other 7 285 -781 6 1385 436 274 8 0 chrX 104925198 104925322 -61724974 - L1MA6 LINE L1 -319 5981 5857 6 1385 223 186 33 33 chrX 104925871 104925932 -61724364 + GA-rich Low_complexity Low_complexity 4 64 0 6 1385 41106 10 1 1 chrX 104926160 104932805 -61717491 - L1Md_A LINE L1 -6 7002 30 6 1385 8000 20 1 1 chrX 104932806 104933831 -61716465 - L1Md_A LINE L1 -4458 1425 401 6 1385 3263 43 5 0 chrX 104933831 104934222 -61716074 - MTA_Mm LTR MaLR -3 393 1 6 1385 2250 119 9 3 chrX 104934223 104934578 -61715718 - Lx2A1 LINE L1 -75 6933 6231 6 1385 246 269 25 13 chrX 104934994 104935073 -61715223 - L1M3e LINE L1 -5637 1393 1314 6 1385 694 231 7 0 chrX 104936132 104936279 -61714017 - B1_Mur2 SINE Alu 0 149 2 6 1385 246 241 0 94 chrX 104936407 104936471 -61713825 - B4 SINE B4 -38 254 197 6 1385 370 324 29 0 chrX 104936667 104936772 -61713524 - B4 SINE B4 -110 182 75 6 1385 290 282 56 46 chrX 104936811 104937008 -61713288 - Lx7 LINE L1 -27 7669 7471 6 1385 1720 277 9 18 chrX 104937058 104937513 -61712783 - Lx7 LINE L1 -403 7293 6843 6 1385 584 287 63 25 chrX 104937528 104937814 -61712482 + Lx7 LINE L1 5924 6220 -1476 6 1385 3096 47 69 5 chrX 104937884 104938291 -61712005 - L1Md_F2 LINE L1 -15 6567 6135 6 1385 1437 195 86 65 chrX 104938291 104938663 -61711633 - ORR1C2 LTR MaLR -3 381 2 6 1385 2517 233 29 17 chrX 104938667 104939253 -61711043 + Lx7 LINE L1 6218 6810 -886 6 1385 274 297 54 0 chrX 104939266 104939340 -61710956 - B4 SINE B4 -195 97 20 6 1385 323 358 99 0 chrX 104939393 104939544 -61710752 - MTE-int LTR MaLR -875 705 540 6 1385 1817 233 89 40 chrX 104939563 104940068 -61710228 - Lx2B LINE L1 0 7000 6471 6 1385 712 301 91 48 chrX 104940218 104940982 -61709314 + MTE-int LTR MaLR 710 1932 -31 6 1385 1196 148 0 6 chrX 104941940 104942286 -61708010 + (CATA)n Simple_repeat Simple_repeat 1 343 0 6 1385 543 184 35 52 chrX 104942300 104942415 -61707881 + B3 SINE B2 1 113 -103 6 1385 25 65 0 0 chrX 104942423 104942469 -61707827 + AT_rich Low_complexity Low_complexity 1 46 0 6 1385 709 304 13 0 chrX 104942469 104942627 -61707669 + RSINE1 SINE B4 4 163 -2 6 1385 25 65 0 0 chrX 104942627 104942673 -61707623 + AT_rich Low_complexity Low_complexity 1 46 0 6 1385 286 248 136 45 chrX 104942969 104943079 -61707217 + MLT2B5 LTR ERVL 194 313 -288 6 1385 551 40 14 0 chrX 104943086 104943160 -61707136 + (TC)n Simple_repeat Simple_repeat 2 76 0 6 1385 249 163 0 0 chrX 104943160 104943209 -61707087 + CT-rich Low_complexity Low_complexity 3 51 0 6 1385 283 304 29 0 chrX 104943266 104943335 -61706961 - B3A SINE B2 -66 132 62 6 1385 2637 72 6 17 chrX 104943420 104943771 -61706525 - L1_Mus2 LINE L1 -56 6510 6164 6 1385 22 56 0 0 chrX 104944358 104944394 -61705902 + AT_rich Low_complexity Low_complexity 1 36 0 6 1385 256 315 214 0 chrX 104945056 104945223 -61705073 - MIR3 SINE MIR -1 207 7 6 1385 263 283 50 10 chrX 104945563 104945663 -61704633 - Lx8 LINE L1 -13 7460 7357 6 1385 25 75 0 0 chrX 104945783 104945836 -61704460 + AT_rich Low_complexity Low_complexity 1 53 0 6 1385 21 0 0 0 chrX 104945874 104945895 -61704401 + AT_rich Low_complexity Low_complexity 1 21 0 6 1385 775 189 17 0 chrX 104946243 104946418 -61703878 + CT-rich Low_complexity Low_complexity 1 178 0 6 1385 271 83 0 0 chrX 104946420 104946456 -61703840 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1385 856 74 8 0 chrX 104946456 104946577 -61703719 - B1_Mus1 SINE Alu 0 148 27 6 1385 451 355 22 16 chrX 104946824 104947007 -61703289 + RMER15 LTR ERVL 295 478 -97 6 1385 402 367 25 37 chrX 104947071 104947480 -61702816 - L1M3e LINE L1 -5110 1920 1464 6 1385 237 98 0 0 chrX 104947607 104947648 -61702648 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 6 1385 605 357 139 6 chrX 104947956 104948286 -61702010 - L1M3e LINE L1 -6046 984 611 6 1385 466 318 35 43 chrX 104948499 104948729 -61701567 - L1M3e LINE L1 -6797 233 6 6 1385 260 259 16 60 chrX 104948740 104948925 -61701371 - L1M4 LINE L1 -2909 3237 3061 6 1385 425 359 25 25 chrX 104948978 104949141 -61701155 - RSINE1 SINE B4 0 165 3 6 1385 1434 211 51 54 chrX 104949189 104949559 -61700737 + ORR1C2 LTR MaLR 1 369 -15 6 1385 859 118 612 5 chrX 104949559 104949774 -61700522 + RMER6C LTR ERVK 1 347 -373 6 1385 30827 83 19 20 chrX 104949779 104954174 -61696122 + L1Md_F2 LINE L1 498 4926 -957 6 1385 226 133 0 82 chrX 104954174 104954223 -61696073 - RMER20A LTR ERVK -286 230 186 6 1385 30827 83 19 20 chrX 104954223 104954875 -61695421 + L1Md_F2 LINE L1 4927 5585 -298 6 1385 7928 58 0 0 chrX 104954876 104955858 -61694438 + L1Md_F2 LINE L1 5587 6568 -14 6 1385 1407 183 47 23 chrX 104955862 104956204 -61694092 + RMER6C LTR ERVK 341 690 0 6 1385 28 29 0 0 chrX 104956224 104956259 -61694037 + AT_rich Low_complexity Low_complexity 1 35 0 6 1385 316 252 35 70 chrX 104956370 104956485 -61693811 - MER3 DNA MER1_type -30 179 69 6 1385 4330 217 48 11 chrX 104956492 104957437 -61692859 + Lx5 LINE L1 6071 7050 0 6 1385 226 311 0 16 chrX 104957846 104957908 -61692388 - ID4_ SINE ID -18 65 5 6 1385 317 314 70 0 chrX 104957918 104958004 -61692292 - PB1D10 SINE Alu -15 102 11 6 1385 422 235 0 10 chrX 104958045 104958148 -61692148 + Lx9 LINE L1 2632 2733 -3114 6 1385 782 250 21 26 chrX 104958150 104958343 -61691953 + Lx5 LINE L1 6856 7047 -3 6 1385 3522 273 56 48 chrX 104958354 104960014 -61690282 + Lx9 LINE L1 2735 4407 -1440 6 1385 225 190 224 0 chrX 104960069 104960127 -61690169 + L1_Mm LINE L1 4428 4498 -1385 6 1385 377 279 1 0 chrX 104960126 104960234 -61690062 + Lx9 LINE L1 5112 5283 -860 6 1385 424 274 23 23 chrX 104960275 104960406 -61689890 + Lx9 LINE L1 5835 5965 -1679 6 1385 246 196 22 0 chrX 104960418 104960464 -61689832 - B3A SINE B2 -151 47 1 6 1385 321 294 176 0 chrX 104960484 104960603 -61689693 - B1F1 SINE Alu -6 143 4 6 1385 2153 267 111 109 chrX 104960709 104961681 -61688615 + Lx8 LINE L1 6142 7115 -358 6 1385 241 333 54 36 chrX 104961696 104961864 -61688432 + Lx8 LINE L1 7301 7471 -2 6 1385 429 20 0 0 chrX 104961987 104962037 -61688259 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 6 1385 639 273 12 36 chrX 104962054 104962221 -61688075 - RSINE1 SINE B4 0 165 3 6 1385 282 56 0 0 chrX 104962278 104962314 -61687982 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1385 538 293 142 60 chrX 104962349 104962667 -61687629 + MLT1D LTR MaLR 88 425 -80 6 1385 30 27 0 0 chrX 104964260 104964297 -61685999 + AT_rich Low_complexity Low_complexity 1 37 0 6 1385 443 298 125 30 chrX 104964671 104964903 -61685393 + MIR SINE MIR 15 268 0 6 1385 1057 95 0 33 chrX 104964966 104965118 -61685178 - B1_Mus2 SINE Alu 0 147 1 6 1385 265 352 55 23 chrX 104965149 104965277 -61685019 - MIRb SINE MIR -88 180 49 6 1385 636 234 7 14 chrX 104965314 104965453 -61684843 + Lx9 LINE L1 7055 7192 -452 6 1385 439 260 115 11 chrX 104965521 104965704 -61684592 + Lx9 LINE L1 7294 7495 -149 6 1385 827 130 0 8 chrX 104965829 104965953 -61684343 + Lx4A LINE L1 6647 6769 -289 6 1385 3242 147 44 69 chrX 104965953 104966609 -61683687 + RLTR26 LTR ERVK 1 640 -2 6 1385 841 171 7 7 chrX 104966610 104966751 -61683545 + Lx4A LINE L1 6765 6905 -153 6 1385 21 0 0 0 chrX 104967254 104967275 -61683021 + AT_rich Low_complexity Low_complexity 1 21 0 6 1385 207 0 0 0 chrX 104968721 104968744 -61681552 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 1385 255 276 78 13 chrX 104969078 104969155 -61681141 + MIR SINE MIR 19 100 -108 6 1385 373 299 28 11 chrX 104969261 104969440 -61680856 - L1MC4 LINE L1 -138 7904 7723 6 1385 255 70 298 0 chrX 104969922 104969979 -61680317 + Lx8 LINE L1 7395 7468 -5 6 1385 342 169 0 0 chrX 104969983 104970048 -61680248 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 1385 3531 213 12 19 chrX 104970222 104970945 -61679351 + Lx9 LINE L1 6635 7352 -292 6 1385 225 94 0 0 chrX 104970951 104970983 -61679313 + (TTG)n Simple_repeat Simple_repeat 2 33 0 6 1385 252 319 84 11 chrX 104971228 104971323 -61678973 - L2 LINE L2 -661 2758 2657 6 1385 1243 232 73 22 chrX 104971585 104971955 -61678341 + Lx9 LINE L1 7221 7609 -35 6 1385 260 298 142 70 chrX 104972618 104973048 -61677248 + L1MEc LINE L1 1368 1828 -4587 6 1385 423 298 32 68 chrX 104973305 104973557 -61676739 + L1MEc LINE L1 2156 2398 -4002 6 1385 350 263 119 42 chrX 104974715 104974858 -61675438 - RSINE1 SINE B4 -10 155 2 6 1385 261 0 0 0 chrX 104974917 104974946 -61675350 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1385 230 386 20 14 chrX 104975547 104975694 -61674602 - MIRc SINE MIR -7 261 114 6 1385 211 254 0 81 chrX 104975780 104975850 -61674446 - MIRm SINE MIR -104 158 94 6 1385 2437 133 79 5 chrX 104975853 104976245 -61674051 - MTC LTR MaLR 0 421 1 6 1385 477 100 140 35 chrX 104976647 104976761 -61673535 - Lx9 LINE L1 -3 7641 7516 6 1385 665 142 190 7 chrX 104976762 104976904 -61673392 + Lx9 LINE L1 7308 7475 -169 6 1385 537 16 0 0 chrX 104976904 104976966 -61673330 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 1385 228 176 137 0 chrX 104976984 104977035 -61673261 - MER5B DNA MER1_type -120 58 1 6 1385 748 208 0 0 chrX 104977184 104977309 -61672987 - B1_Mur2 SINE Alu 0 149 25 6 1385 329 304 0 0 chrX 104977449 104977528 -61672768 + ID4_ SINE ID 2 80 -3 6 1385 240 245 0 35 chrX 104977746 104977860 -61672436 + CT-rich Low_complexity Low_complexity 2 111 0 6 1385 224 339 0 48 chrX 104977861 104977923 -61672373 - B1F1 SINE Alu -90 59 1 6 1385 1300 229 206 2 chrX 104978696 104979134 -61671162 + RLTR11A2 LTR ERVK 1 527 0 7 1385 540 194 29 0 chrX 104979625 104979728 -61670568 - B3 SINE B2 -110 106 1 7 1385 729 255 7 0 chrX 104980267 104980416 -61669880 - RSINE1 SINE B4 -14 151 2 7 1385 487 208 109 0 chrX 104980434 104980535 -61669761 - PB1D9 SINE Alu -6 114 3 7 1385 502 288 6 81 chrX 104980537 104980711 -61669585 - B3A SINE B2 -2 196 36 7 1385 1166 244 111 44 chrX 104981118 104981461 -61668835 + ORR1D2 LTR MaLR 1 366 -4 7 1385 1833 194 25 60 chrX 104981477 104981878 -61668418 + ORR1D2-int LTR MaLR 984 1370 0 7 1385 1097 272 97 15 chrX 104981878 104982217 -61668079 + ORR1D2 LTR MaLR 1 367 -3 7 1385 229 213 38 62 chrX 104982276 104982356 -61667940 + B1F SINE Alu 70 147 -2 7 1385 1090 223 0 9 chrX 104982386 104982603 -61667693 + B3 SINE B2 1 215 -1 7 1385 27 49 0 0 chrX 104983528 104983569 -61666727 + AT_rich Low_complexity Low_complexity 1 41 0 7 1385 25 83 0 0 chrX 104983966 104984026 -61666270 + AT_rich Low_complexity Low_complexity 1 60 0 7 1385 2013 251 31 5 chrX 104984037 104984461 -61665835 - Lx6 LINE L1 -5 7455 7021 7 1385 1816 35 26 4 chrX 104984521 104984753 -61665543 - L1Md_F3 LINE L1 -12 6572 6336 7 1385 3390 54 2 0 chrX 104984753 104985176 -61665120 + L1Md_F3 LINE L1 5897 6320 -264 7 1385 298 278 66 11 chrX 104985577 104985668 -61664628 + MER20 DNA MER1_type 7 102 -117 7 1385 324 0 0 0 chrX 104985774 104985810 -61664486 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 1385 256 304 29 88 chrX 104986227 104986364 -61663932 + B3A SINE B2 70 198 0 7 1385 1016 107 0 23 chrX 104986456 104986629 -61663667 + L1Md_F2 LINE L1 6414 6582 0 7 1385 21 0 0 0 chrX 104986685 104986706 -61663590 + AT_rich Low_complexity Low_complexity 1 21 0 7 1385 342 316 86 0 chrX 104987533 104987685 -61662611 + MER2 DNA MER2_type 93 257 -88 7 1385 295 363 8 24 chrX 104988062 104988075 -61662221 - ID_B1 SINE B4 -16 208 84 7 1385 446 274 35 9 chrX 104988075 104988189 -61662107 - B1F SINE Alu -30 119 3 7 1386 457 217 117 0 chrX 104989254 104989367 -61660929 + B1_Mur2 SINE Alu 13 136 -13 7 1386 438 20 0 0 chrX 104989367 104989418 -61660878 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 7 1386 394 274 87 24 chrX 104989418 104989431 -61660865 + B1_Mus2 SINE Alu 135 147 0 7 1386 22 35 0 0 chrX 104989491 104989520 -61660776 + AT_rich Low_complexity Low_complexity 1 29 0 7 1386 269 336 70 17 chrX 104990314 104990429 -61659867 - L2a LINE L2 -27 3399 3279 7 1386 515 175 10 58 chrX 104990468 104990571 -61659725 + PB1D9 SINE Alu 11 108 -12 7 1386 335 178 119 0 chrX 104990635 104990736 -61659560 + Lx9 LINE L1 7531 7643 -1 7 1386 204 342 46 46 chrX 104990991 104991144 -61659152 - L2a LINE L2 -478 2941 2789 7 1386 332 285 8 82 chrX 104991146 104991271 -61659025 + BC1_Mm scRNA scRNA 1 114 -38 7 1386 1057 53 20 7 chrX 104991568 104991719 -61658577 + L1Md_F2 LINE L1 6430 6582 0 7 1386 362 357 29 0 chrX 104991773 104991913 -61658383 - L2a LINE L2 -1275 2144 2001 7 1386 216 218 0 75 chrX 104992163 104992257 -61658039 + A-rich Low_complexity Low_complexity 4 90 0 7 1386 228 366 99 0 chrX 104992506 104992637 -61657659 - L2a LINE L2 -1905 1514 1371 7 1386 375 291 0 0 chrX 104992809 104992888 -61657408 + ID4_ SINE ID 5 83 0 7 1386 4731 98 5 3 chrX 104993148 104993826 -61656470 + L1Md_F3 LINE L1 4957 5635 -949 7 1386 850 218 0 0 chrX 104993851 104993998 -61656298 + URR1A DNA MER1_type 2 148 -78 7 1386 776 271 17 17 chrX 104994563 104994743 -61655553 - B3 SINE B2 -10 206 27 7 1386 312 91 0 0 chrX 104994745 104994789 -61655507 + (T)n Simple_repeat Simple_repeat 1 44 0 7 1386 424 159 0 0 chrX 104994795 104994858 -61655438 - B1_Mur4 SINE Alu -8 142 80 7 1386 1863 109 56 31 chrX 104994890 104995211 -61655085 + ORR1A4 LTR MaLR 1 329 0 7 1386 580 285 133 17 chrX 104995442 104995795 -61654501 - Lx9 LINE L1 -18 7626 7233 7 1386 23 33 0 0 chrX 104996277 104996307 -61653989 + AT_rich Low_complexity Low_complexity 1 30 0 7 1386 265 296 29 39 chrX 104996870 104996972 -61653324 - MER58A DNA MER1_type -50 174 74 7 1386 207 125 0 0 chrX 104997465 104997505 -61652791 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 7 1386 5663 190 69 19 chrX 104997609 104998750 -61651546 + Lx7 LINE L1 6179 7376 -320 7 1386 289 264 103 40 chrX 104998813 104998939 -61651357 + Lx7 LINE L1 7563 7696 0 7 1386 1316 267 136 22 chrX 104998931 104999102 -61651194 + L1_Mur3 LINE L1 5263 5433 -447 7 1386 225 0 0 0 chrX 104999102 104999127 -61651169 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 1386 1316 253 136 14 chrX 104999127 104999504 -61650792 + L1_Mur3 LINE L1 5434 5867 -13 7 1386 1446 167 90 8 chrX 104999734 105000000 -61650296 + MTC LTR MaLR 1 288 -133 7 1386 520 245 23 56 chrX 105000005 105000137 -61650159 + MTC LTR MaLR 293 413 -8 1 1386 1739 291 103 52 chrX 105000137 105001415 -61648881 + Lx8 LINE L1 6132 7473 0 2 1386 333 291 70 0 chrX 105001459 105001545 -61648751 + MER68 LTR ERVL 13 104 -459 3 1386 1120 286 38 40 chrX 105001681 105002229 -61648067 + L1MA7 LINE L1 5387 5906 -1567 4 1386 1181 336 38 5 chrX 105002410 105002805 -61647491 + MER68 LTR ERVL 125 532 -31 3 1386 244 352 0 0 chrX 105003476 105003564 -61646732 + L1MC4a LINE L1 7352 7439 -443 5 1386 1036 171 93 1 chrX 105003729 105003946 -61646350 - MTD LTR MaLR -123 296 20 6 1386 330 80 0 0 chrX 105003947 105003997 -61646299 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 7 1386 265 348 0 0 chrX 105004174 105004243 -61646053 + RSINE1 SINE B4 87 155 -10 8 1386 977 200 0 33 chrX 105004300 105004512 -61645784 + B3 SINE B2 2 206 -10 9 1386 26 0 0 0 chrX 105004547 105004573 -61645723 + AT_rich Low_complexity Low_complexity 1 26 0 1 1386 360 0 0 0 chrX 105004785 105004825 -61645471 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1386 897 252 24 0 chrX 105004842 105005048 -61645248 + B3 SINE B2 1 211 -5 1 1386 315 71 0 0 chrX 105005370 105005412 -61644884 + (CATA)n Simple_repeat Simple_repeat 2 43 0 1 1386 1212 47 0 0 chrX 105005678 105005826 -61644470 - B1_Mus1 SINE Alu 0 148 1 1 1386 671 250 19 55 chrX 105006431 105006602 -61643694 + B3A SINE B2 1 162 -31 1 1386 808 59 17 0 chrX 105006602 105006721 -61643575 + (CA)n Simple_repeat Simple_repeat 2 122 0 1 1386 293 297 66 93 chrX 105006721 105006749 -61643547 + B2_Mm1t SINE B2 163 186 -7 1 1386 890 155 84 0 chrX 105006986 105007141 -61643155 - URR1A DNA MER1_type 0 226 59 1 1386 1837 220 67 51 chrX 105007409 105007935 -61642361 + RMER5 LTR ERV1 1 534 0 1 1386 1085 102 0 0 chrX 105008044 105008191 -61642105 + B1_Mus1 SINE Alu 2 148 0 1 1386 251 298 73 46 chrX 105008653 105008762 -61641534 - L2c LINE L2 -18 3369 3258 2 1386 757 283 52 65 chrX 105009444 105009750 -61640546 + Lx8 LINE L1 7029 7330 -143 2 1386 883 62 141 0 chrX 105009796 105009924 -61640372 + B1_Mus2 SINE Alu 1 146 -1 2 1386 23 0 0 0 chrX 105011283 105011306 -61638990 + AT_rich Low_complexity Low_complexity 1 23 0 2 1386 386 301 37 0 chrX 105014246 105014382 -61635914 + B1F2 SINE Alu 4 144 -5 2 1386 453 36 0 0 chrX 105014649 105014704 -61635592 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 1386 498 17 0 0 chrX 105015373 105015432 -61634864 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 2 1386 235 293 0 0 chrX 105015498 105015556 -61634740 + B1F2 SINE Alu 2 59 -90 2 1386 434 292 108 39 chrX 105015600 105015803 -61634493 - MER20 DNA MER1_type -1 218 2 2 1386 468 86 0 0 chrX 105015984 105016054 -61634242 + (TG)n Simple_repeat Simple_repeat 1 70 0 2 1386 598 351 58 32 chrX 105016078 105016355 -61633941 - B4A SINE B4 -6 286 3 3 1386 2897 206 154 4 chrX 105016987 105017695 -61632601 - Lx5 LINE L1 -457 6593 5780 3 1386 25 51 0 0 chrX 105017706 105017745 -61632551 + AT_rich Low_complexity Low_complexity 1 39 0 3 1386 22 56 0 0 chrX 105017866 105017902 -61632394 + AT_rich Low_complexity Low_complexity 1 36 0 3 1386 216 322 11 22 chrX 105018621 105018713 -61631583 + GA-rich Low_complexity Low_complexity 3 93 0 3 1386 1297 232 136 3 chrX 105019134 105019502 -61630794 - MTD LTR MaLR 0 419 3 3 1386 201 147 0 0 chrX 105019537 105019571 -61630725 + (CACCAT)n Simple_repeat Simple_repeat 2 35 0 3 1386 249 217 2 0 chrX 105020285 105020357 -61629939 - Lx5 LINE L1 -1182 5868 5777 3 1386 483 73 0 0 chrX 105020912 105020980 -61629316 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 1386 300 356 97 15 chrX 105020993 105021127 -61629169 - RSINE1 SINE B4 -18 147 3 3 1386 21 0 0 0 chrX 105022413 105022434 -61627862 + AT_rich Low_complexity Low_complexity 1 21 0 4 1386 1094 53 0 0 chrX 105023209 105023342 -61626954 + B1_Mus2 SINE Alu 2 134 -13 4 1386 573 55 0 0 chrX 105023343 105023416 -61626880 + (GAAAA)n Simple_repeat Simple_repeat 2 74 0 4 1386 480 18 0 0 chrX 105024344 105024401 -61625895 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1386 212 59 29 0 chrX 105024404 105024438 -61625858 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 1386 470 91 13 0 chrX 105024609 105024686 -61625610 + (TA)n Simple_repeat Simple_repeat 2 79 0 4 1386 495 118 0 0 chrX 105025351 105025427 -61624869 + (TA)n Simple_repeat Simple_repeat 2 77 0 4 1386 420 123 0 0 chrX 105025427 105025499 -61624797 + (TG)n Simple_repeat Simple_repeat 2 74 0 4 1386 460 226 43 9 chrX 105025579 105025695 -61624601 - PB1D9 SINE Alu 0 120 1 4 1386 289 322 236 6 chrX 105025706 105025884 -61624412 + MIRb SINE MIR 38 256 -12 4 1386 397 291 27 0 chrX 105026450 105026560 -61623736 - PB1D7 SINE Alu -7 113 1 5 1386 379 276 19 0 chrX 105026586 105026691 -61623605 - B1F SINE Alu -1 148 42 5 1386 1755 214 165 48 chrX 105026861 105027106 -61623190 + RMER6C LTR ERVK 1 309 -381 5 1386 5107 44 13 0 chrX 105027106 105027742 -61622554 - L1Md_F2 LINE L1 -1 6581 5938 5 1386 1755 214 165 48 chrX 105027742 105028114 -61622182 + RMER6C LTR ERVK 310 690 0 5 1386 461 318 23 0 chrX 105028696 105028825 -61621471 + B1F2 SINE Alu 11 142 -7 5 1386 445 311 8 39 chrX 105028863 105028990 -61621306 - B1F SINE Alu -21 128 6 5 1386 326 307 331 18 chrX 105029183 105029352 -61620944 + ID_B1 SINE B4 3 224 0 5 1386 1529 238 54 13 chrX 105029757 105030145 -61620151 - MTD LTR MaLR -15 404 1 5 1386 465 201 164 0 chrX 105030147 105030281 -61620015 - MTD-int LTR MaLR -2 1256 1101 5 1386 26 50 0 0 chrX 105030428 105030468 -61619828 + AT_rich Low_complexity Low_complexity 1 40 0 5 1386 5958 109 18 9 chrX 105030468 105031402 -61618894 - Lx3A LINE L1 0 6981 6039 5 1386 3063 233 64 38 chrX 105031402 105032231 -61618065 - MTD-int LTR MaLR -157 1101 249 5 1386 5665 42 9 3 chrX 105032231 105032932 -61617364 - L1Md_F2 LINE L1 -1 6581 5877 6 1386 3063 233 64 38 chrX 105032932 105032943 -61617353 - MTD-int LTR MaLR -1010 248 239 5 1386 1211 208 5 0 chrX 105032943 105033164 -61617132 + URR1B DNA MER1_type 1 222 -3 6 1386 423 294 65 52 chrX 105033164 105033313 -61616983 - MTD-int LTR MaLR -991 267 117 5 1386 477 238 19 0 chrX 105033446 105033551 -61616745 - MTD-int LTR MaLR -1149 109 3 5 1386 1349 247 94 3 chrX 105033557 105033938 -61616358 - MTD LTR MaLR 0 419 4 5 1386 25 51 0 0 chrX 105034167 105034206 -61616090 + AT_rich Low_complexity Low_complexity 1 39 0 6 1386 400 299 102 20 chrX 105034731 105034878 -61615418 + RSINE1 SINE B4 5 163 -2 6 1386 21 36 0 0 chrX 105035082 105035110 -61615186 + AT_rich Low_complexity Low_complexity 1 28 0 6 1386 7080 106 8 5 chrX 105036574 105037632 -61612664 + L1_Mur1 LINE L1 3904 4965 -921 6 1386 22 0 0 0 chrX 105038011 105038033 -61612263 + AT_rich Low_complexity Low_complexity 1 22 0 6 1386 23 33 0 0 chrX 105038762 105038792 -61611504 + AT_rich Low_complexity Low_complexity 1 30 0 6 1386 220 252 99 20 chrX 105039571 105039672 -61610624 - MIR SINE MIR -23 239 131 6 1386 222 61 61 0 chrX 105040591 105040640 -61609656 + (TA)n Simple_repeat Simple_repeat 1 52 0 6 1386 1580 166 14 20 chrX 105041371 105041667 -61608629 + Lx4B LINE L1 6680 6973 -85 7 1386 984 303 7 18 chrX 105041709 105041985 -61608311 + B4A SINE B4 1 273 -19 7 1386 198 103 0 0 chrX 105042651 105042680 -61607616 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1386 273 228 0 0 chrX 105042694 105042751 -61607545 - B1F SINE Alu -26 123 67 7 1386 30 59 0 0 chrX 105043047 105043098 -61607198 + AT_rich Low_complexity Low_complexity 1 51 0 7 1386 430 354 151 17 chrX 105043683 105044094 -61606202 - L2 LINE L2 -392 3027 2562 7 1386 187 358 141 18 chrX 105044191 105044467 -61605829 - L2 LINE L2 -1103 2316 2007 7 1386 661 196 185 0 chrX 105044470 105044643 -61605653 + L1Md_F LINE L1 493 697 -5822 7 1386 842 198 44 33 chrX 105044632 105044815 -61605481 - Lx4B LINE L1 -145 6913 6729 7 1386 773 303 27 13 chrX 105044815 105045039 -61605257 + Lx8 LINE L1 7125 7351 -122 7 1386 24 32 0 0 chrX 105045128 105045159 -61605137 + AT_rich Low_complexity Low_complexity 1 31 0 7 1386 2521 129 2 0 chrX 105045522 105045917 -61604379 - Lx2B LINE L1 -656 6344 5949 8 1386 3865 109 61 2 chrX 105045917 105046523 -61603773 + Lx2B LINE L1 6356 6997 -3 8 1386 358 206 40 40 chrX 105046523 105046535 -61603761 - L1_Mus3 LINE L1 -690 5948 5939 8 1386 1461 285 39 7 chrX 105046637 105047050 -61603246 - Lx7 LINE L1 -377 7319 6894 8 1386 258 288 0 0 chrX 105047056 105047115 -61603181 + CT-rich Low_complexity Low_complexity 2 60 0 8 1386 1134 258 32 3 chrX 105047120 105047404 -61602892 - Lx7 LINE L1 -791 6905 6614 8 1386 2148 268 9 18 chrX 105047737 105048284 -61602012 - Lx7 LINE L1 -1063 6633 6092 8 1386 246 336 42 8 chrX 105048304 105048424 -61601872 + MIRb SINE MIR 38 161 -107 8 1386 255 376 37 15 chrX 105048471 105048606 -61601690 + MIRb SINE MIR 122 259 -9 8 1386 285 131 0 0 chrX 105048749 105048810 -61601486 + (TG)n Simple_repeat Simple_repeat 2 62 0 8 1386 1303 259 105 41 chrX 105049033 105049452 -61600844 - Lx8 LINE L1 -236 7237 6792 8 1386 216 0 0 0 chrX 105049946 105049970 -61600326 + (TG)n Simple_repeat Simple_repeat 2 25 0 8 1386 414 0 0 0 chrX 105049975 105050021 -61600275 + (TAA)n Simple_repeat Simple_repeat 3 48 0 8 1386 42 48 0 0 chrX 105050607 105050670 -61599626 + AT_rich Low_complexity Low_complexity 1 63 0 9 1386 738 192 0 46 chrX 105050806 105050959 -61599337 + B1_Mus1 SINE Alu 2 147 -1 9 1386 234 0 0 0 chrX 105050978 105051004 -61599292 + (TTG)n Simple_repeat Simple_repeat 2 27 0 9 1386 1153 54 0 7 chrX 105051730 105051879 -61598417 + B1_Mus1 SINE Alu 1 148 0 9 1386 699 99 0 0 chrX 105051879 105051980 -61598316 + (GAAA)n Simple_repeat Simple_repeat 3 103 0 9 1386 24 0 0 0 chrX 105052794 105052818 -61597478 + AT_rich Low_complexity Low_complexity 1 24 0 9 1386 381 117 0 0 chrX 105053268 105053328 -61596968 + (TG)n Simple_repeat Simple_repeat 1 60 0 9 1386 180 253 90 67 chrX 105055549 105055638 -61594658 + L3 LINE CR1 1067 1157 -3332 9 1386 1062 237 5 9 chrX 105056507 105056724 -61593572 - B3 SINE B2 0 216 1 9 1386 395 154 0 11 chrX 105057044 105057136 -61593160 - Lx3A LINE L1 0 6981 6891 9 1386 466 175 10 0 chrX 105057331 105057434 -61592862 + Lx6 LINE L1 7331 7434 -26 1 1386 967 290 37 30 chrX 105058549 105058819 -61591477 - B4A SINE B4 -20 272 1 1 1386 3037 180 83 74 chrX 105058928 105059431 -61590865 - RMER1B Other Other -2 1064 539 1 1386 942 9 0 0 chrX 105059431 105059538 -61590758 + (CA)n Simple_repeat Simple_repeat 2 108 0 1 1386 3037 201 125 52 chrX 105059538 105059903 -61590393 - RMER1B Other Other -528 538 19 1 1386 1759 257 106 17 chrX 105059921 105060440 -61589856 - RMER1B Other Other -500 566 2 1 1386 443 274 152 6 chrX 105060450 105060608 -61589688 + MER5A DNA MER1_type 5 185 -4 1 1386 5185 137 19 4 chrX 105061087 105061876 -61588420 - Lx2 LINE L1 -1 6996 6196 1 1386 275 150 8 55 chrX 105062709 105062836 -61587460 + (TATAA)n Simple_repeat Simple_repeat 5 125 0 1 1386 29 0 0 0 chrX 105062849 105062878 -61587418 + AT_rich Low_complexity Low_complexity 1 29 0 1 1386 24 32 0 0 chrX 105063546 105063577 -61586719 + AT_rich Low_complexity Low_complexity 1 31 0 1 1386 2016 131 66 0 chrX 105064280 105064532 -61585764 + Lx2 LINE L1 6608 6869 -128 1 1386 198 0 0 0 chrX 105064532 105064554 -61585742 + (TGGG)n Simple_repeat Simple_repeat 1 22 0 1 1386 2016 131 66 0 chrX 105064554 105064667 -61585629 + Lx2 LINE L1 6870 6996 -1 1 1386 22 35 0 0 chrX 105068227 105068256 -61582040 + AT_rich Low_complexity Low_complexity 1 29 0 1 1386 25 0 0 0 chrX 105068551 105068576 -61581720 + AT_rich Low_complexity Low_complexity 1 25 0 1 1386 479 230 87 0 chrX 105070925 105071094 -61579202 - L1MA6 LINE L1 -33 6267 6083 1 1386 333 68 0 0 chrX 105073621 105073665 -61576631 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1386 518 109 54 0 chrX 105073976 105074068 -61576228 - L1_Mus2 LINE L1 -1 6565 6469 1 1386 31 82 0 0 chrX 105074606 105074679 -61575617 + AT_rich Low_complexity Low_complexity 1 73 0 1 1386 1016 25 0 8 chrX 105074773 105074895 -61575401 - L1_Mus1 LINE L1 -860 5707 5587 1 1386 3318 60 2 0 chrX 105074904 105075319 -61574977 + L1_Mus1 LINE L1 5815 6230 -337 1 1386 1873 56 0 0 chrX 105075320 105075553 -61574743 + L1_Mus1 LINE L1 6334 6566 -1 1 1386 3212 67 14 7 chrX 105076534 105076973 -61573323 - Lx3_Mus LINE L1 0 7009 6568 1 1386 2738 109 42 34 chrX 105076998 105077474 -61572822 - RLTR45 LTR ERVK 0 482 3 1 1386 2499 225 60 38 chrX 105077494 105078619 -61571677 - L1MC1 LINE L1 -104 6229 5050 1 1386 8503 138 30 17 chrX 105078615 105080080 -61570216 + Lx2 LINE L1 5499 6996 -1 1 1386 430 240 140 31 chrX 105080075 105080303 -61569993 - L1MC LINE L1 -809 5535 5283 1 1386 8427 26 1 0 chrX 105080300 105081376 -61568920 - L1Md_T LINE L1 0 6582 5506 1 1386 464 270 147 17 chrX 105081451 105081628 -61568668 - MER2 DNA MER2_type -28 317 118 1 1386 22 0 0 0 chrX 105081650 105081672 -61568624 + AT_rich Low_complexity Low_complexity 1 22 0 1 1386 1136 296 107 10 chrX 105081745 105082445 -61567851 - L1MC LINE L1 -935 5211 4444 1 1386 1011 340 72 6 chrX 105082684 105083154 -61567142 - Lx8 LINE L1 -314 7159 6659 1 1386 461 263 119 0 chrX 105083266 105083384 -61566912 + B1F1 SINE Alu 10 141 -8 1 1386 753 296 117 61 chrX 105083408 105083584 -61566712 + L1MA10 LINE L1 5495 5652 -682 1 1386 1941 161 30 38 chrX 105083584 105083983 -61566313 + Lx2B LINE L1 6605 7000 0 1 1386 753 296 117 61 chrX 105083983 105084062 -61566234 + L1MA10 LINE L1 5653 5750 -584 1 1386 414 0 0 0 chrX 105084062 105084108 -61566188 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1386 753 296 117 61 chrX 105084108 105084640 -61565656 + L1MA10 LINE L1 5751 6325 -9 1 1386 592 306 56 16 chrX 105085437 105085697 -61564599 - MLT1A0 LTR MaLR -4 370 98 1 1386 1428 96 0 9 chrX 105086140 105086351 -61563945 + L1Md_F2 LINE L1 6353 6561 -21 1 1386 31 58 0 0 chrX 105086352 105086404 -61563892 + AT_rich Low_complexity Low_complexity 1 52 0 1 1386 4843 107 7 36 chrX 105086526 105086957 -61563339 - L1VL2 LINE L1 -2407 1208 817 1 1386 1180 41 7 0 chrX 105086957 105087102 -61563194 - B1_Mus2 SINE Alu 0 147 2 1 1386 4843 181 17 47 chrX 105087102 105087853 -61562443 - L1VL2 LINE L1 -5519 816 66 1 1386 521 327 6 23 chrX 105087863 105088035 -61562261 + MLT1A LTR MaLR 193 361 -13 1 1386 1852 136 4 4 chrX 105089223 105089497 -61560799 - Lx4B LINE L1 -508 6550 6277 1 1386 2111 152 100 21 chrX 105089496 105089885 -61560411 + Lx4B LINE L1 6578 6997 -61 1 1386 3060 130 105 0 chrX 105089893 105090416 -61559880 + Lx3C LINE L1 6397 6974 -2 1 1386 457 164 98 0 chrX 105090442 105090564 -61559732 - Lx9 LINE L1 0 7644 7511 1 1386 225 146 0 0 chrX 105090571 105090619 -61559677 + (A)n Simple_repeat Simple_repeat 1 48 0 1 1386 494 259 58 58 chrX 105090691 105090896 -61559400 - Lx9 LINE L1 -1592 6052 5848 1 1386 3979 199 41 71 chrX 105091362 105091978 -61558318 - Lx9 LINE L1 -34 5813 5214 1 1386 2289 72 0 22 chrX 105091978 105092290 -61558006 - L1_Mus1 LINE L1 0 6567 6263 1 1386 3979 199 41 71 chrX 105092290 105092817 -61557479 - Lx9 LINE L1 -634 5213 4704 1 1386 6016 83 50 30 chrX 105092885 105093770 -61556526 - RLTR13D6 LTR ERVK 0 902 1 1 1386 2969 291 38 5 chrX 105093770 105094608 -61555688 - Lx8 LINE L1 -229 7244 6379 1 1386 193 368 127 8 chrX 105095030 105095148 -61555148 + L2c LINE L2 3029 3160 -227 1 1386 672 255 289 36 chrX 105095166 105095467 -61554829 + MTEa LTR MaLR 3 379 0 1 1386 3850 85 96 17 chrX 105096421 105097007 -61553289 - Lx3_Mus LINE L1 -1 7008 6377 1 1386 1306 63 0 6 chrX 105097213 105097389 -61552907 - L1Md_F2 LINE L1 -12 6570 6396 1 1386 413 294 98 17 chrX 105097614 105097787 -61552509 + L2c LINE L2 2963 3149 -238 1 1386 186 111 0 28 chrX 105098040 105098076 -61552220 + MIR SINE MIR 118 153 -115 1 1386 186 103 0 0 chrX 105098569 105098598 -61551698 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 1386 459 0 0 0 chrX 105098611 105098662 -61551634 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 1386 526 299 7 14 chrX 105098662 105098801 -61551495 - RSINE1 SINE B4 -24 141 4 1 1386 422 323 149 17 chrX 105098801 105099097 -61551199 + Lx8 LINE L1 6790 7124 -349 1 1386 210 71 0 0 chrX 105099098 105099126 -61551170 + (GGA)n Simple_repeat Simple_repeat 3 30 0 1 1386 5883 102 18 0 chrX 105100813 105101648 -61548648 - Lx3_Mus LINE L1 0 7009 6160 1 1386 7006 65 17 4 chrX 105101649 105102608 -61547688 + L1_Mur1 LINE L1 4480 5450 -436 1 1386 461 17 0 17 chrX 105102616 105102675 -61547621 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 1 1386 3580 158 39 22 chrX 105102677 105103277 -61547019 - Lx2B LINE L1 -8 6992 6392 1 1386 288 0 0 0 chrX 105103277 105103309 -61546987 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 1386 3580 158 39 22 chrX 105103309 105103401 -61546895 - Lx2B LINE L1 -609 6391 6290 1 1386 1247 168 5 31 chrX 105103664 105103886 -61546410 - MTC LTR MaLR -8 413 198 1 1386 1370 55 0 6 chrX 105103886 105104067 -61546229 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1386 555 43 0 0 chrX 105104072 105104142 -61546154 + (TC)n Simple_repeat Simple_repeat 2 71 0 1 1386 22106 101 12 9 chrX 105104160 105108037 -61542259 - L1_Mur1 LINE L1 -1216 4670 780 1 1386 1002 189 60 15 chrX 105108037 105108236 -61542060 - MTC LTR MaLR -211 210 3 1 1386 288 0 0 0 chrX 105108546 105108578 -61541718 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1386 41 21 0 0 chrX 105108580 105108628 -61541668 + AT_rich Low_complexity Low_complexity 1 48 0 1 1386 4789 131 23 93 chrX 105108927 105109851 -61540445 + Lx3_Mus LINE L1 5777 6635 -374 1 1386 6719 115 7 63 chrX 105109849 105111047 -61539249 + L1_Mm LINE L1 3225 4355 -1528 1 1386 1618 99 12 0 chrX 105111049 105111291 -61539005 + L1_Mus3 LINE L1 6393 6637 -1 1 1386 351 0 0 0 chrX 105111305 105111344 -61538952 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 1 1386 1033 84 18 6 chrX 105111424 105111591 -61538705 + L1_Mus3 LINE L1 6465 6633 -5 1 1386 12398 100 19 1 chrX 105111593 105112104 -61538192 + L1Md_F2 LINE L1 3752 4264 -1619 1 1386 4377 98 58 6 chrX 105112103 105112771 -61537525 + L1_Mus2 LINE L1 5864 6566 0 1 1386 12398 100 19 1 chrX 105112771 105113721 -61536575 + L1Md_F2 LINE L1 4264 5232 -651 1 1386 342 0 0 0 chrX 105113721 105113759 -61536537 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 1386 12398 100 19 1 chrX 105113759 105114098 -61536198 + L1Md_F2 LINE L1 5233 5583 -300 1 1386 7450 66 13 8 chrX 105114099 105115076 -61535220 + L1Md_F2 LINE L1 5587 6568 -14 1 1386 1089 34 14 7 chrX 105115080 105115227 -61535069 + (GAAA)n Simple_repeat Simple_repeat 1 148 0 1 1386 3307 276 63 22 chrX 105115989 105117004 -61533292 - Lx8 LINE L1 -149 7324 6268 1 1386 376 222 9 100 chrX 105117100 105117210 -61533086 + Lx8 LINE L1 5815 5914 -1559 1 1386 4027 128 0 32 chrX 105117292 105117913 -61532383 + MT2B LTR ERVL 1 601 0 1 1386 282 160 0 0 chrX 105118427 105118477 -61531819 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 1 1386 277 365 12 0 chrX 105118691 105118776 -61531520 + Arthur1 DNA Tip100 1 86 -3861 1 1386 423 354 51 8 chrX 105118901 105119157 -61531139 + Arthur1 DNA Tip100 2736 3002 -945 1 1386 232 363 8 89 chrX 105119109 105119233 -61531063 + Tigger7 DNA MER2_type 5 118 -2373 1 1386 523 266 146 0 chrX 105119226 105119418 -61530878 + Tigger7 DNA MER2_type 2271 2490 -1 1 1387 21 0 0 0 chrX 105120706 105120727 -61529569 + AT_rich Low_complexity Low_complexity 1 21 0 1 1387 791 338 64 22 chrX 105120859 105120918 -61529378 - MT2A LTR ERVL 0 533 462 1 1387 378 0 0 0 chrX 105120918 105120960 -61529336 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1387 791 338 64 22 chrX 105120960 105121306 -61528990 - MT2A LTR ERVL -72 461 112 1 1387 1822 211 26 112 chrX 105122342 105122769 -61527527 - RMER19B LTR ERVK -512 390 1 1 1387 1804 110 99 7 chrX 105122900 105123202 -61527094 - Lx3_Mus LINE L1 -8 7001 6672 1 1387 2424 117 45 16 chrX 105123202 105123639 -61526657 + Lx3_Mus LINE L1 5901 6328 -730 1 1387 28 0 0 0 chrX 105123753 105123781 -61526515 + AT_rich Low_complexity Low_complexity 1 28 0 1 1387 24 32 0 0 chrX 105123983 105124014 -61526282 + AT_rich Low_complexity Low_complexity 1 31 0 1 1387 22163 39 3 0 chrX 105124488 105127255 -61523041 + L1Md_A LINE L1 1502 4276 -1607 1 1387 5359 18 0 0 chrX 105127259 105127877 -61522419 + L1Md_A LINE L1 4969 5586 -297 1 1387 8244 27 23 0 chrX 105127878 105128851 -61521445 + L1Md_A LINE L1 5588 6582 0 1 1387 297 128 0 0 chrX 105129601 105129648 -61520648 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 1387 2273 300 48 9 chrX 105129673 105130356 -61519940 - Lx8 LINE L1 -206 7267 6558 1 1387 5119 215 78 56 chrX 105130388 105131988 -61518308 + ORR1A4-int LTR MaLR 329 1963 0 1 1387 1482 172 56 68 chrX 105131988 105132312 -61517984 + ORR1A4 LTR MaLR 1 320 -9 1 1387 2678 80 65 3 chrX 105132324 105132711 -61517585 + RLTR10A LTR ERVK 1 411 0 1 1387 1663 95 20 28 chrX 105132713 105132961 -61517335 + RLTR10-int LTR ERVK 304 549 -1438 1 1387 1076 101 21 63 chrX 105133419 105133610 -61516686 + RLTR10-int LTR ERVK 810 992 -995 1 1387 3584 311 54 36 chrX 105133735 105135903 -61514393 + RLTR10-int LTR ERVK 826 3033 -3509 1 1387 1831 208 92 35 chrX 105135899 105136514 -61513782 + RLTR10-int LTR ERVK 986 1281 -706 1 1387 4876 107 4 14 chrX 105136556 105137259 -61513037 + RLTR10-int LTR ERVK 1272 1967 -20 1 1387 325 365 23 17 chrX 105137259 105137278 -61513018 + BGLII_B LTR ERVK 250 268 -177 1 1387 2983 68 2 40 chrX 105137278 105137705 -61512591 + RLTR10A LTR ERVK 1 411 0 1 1387 444 333 16 2 chrX 105137705 105137858 -61512438 + BGLII_B LTR ERVK 269 423 -22 1 1387 274 324 98 35 chrX 105137897 105138153 -61512143 + ERVL-B4-int LTR ERVL 5107 5378 -336 2 1387 303 326 11 11 chrX 105138409 105138499 -61511797 + B4 SINE B4 12 101 -191 2 1387 910 288 97 29 chrX 105138651 105138959 -61511337 + MTE2b LTR MaLR 1 329 -50 2 1387 572 315 0 24 chrX 105138989 105139155 -61511141 + MTE-int LTR MaLR 1 162 -1418 2 1387 548 364 61 29 chrX 105139135 105139415 -61510881 + MTE-int LTR MaLR 267 555 -1025 2 1387 275 206 286 0 chrX 105139450 105139576 -61510720 + Lx9 LINE L1 7441 7602 -42 2 1387 397 331 67 51 chrX 105139596 105139774 -61510522 + MTE-int LTR MaLR 645 825 -755 2 1387 335 272 0 61 chrX 105139813 105139879 -61510417 + Lx8 LINE L1 7007 7072 -401 2 1387 1601 199 50 19 chrX 105139879 105140242 -61510054 + ORR1D1 LTR MaLR 1 374 0 2 1387 335 272 0 61 chrX 105140242 105140273 -61510023 + Lx8 LINE L1 7073 7098 -375 2 1387 361 329 77 0 chrX 105140641 105140784 -61509512 + RSINE1 SINE B4 3 156 -9 2 1387 234 339 0 32 chrX 105143598 105143723 -61506573 + CT-rich Low_complexity Low_complexity 3 123 0 2 1387 234 212 22 45 chrX 105144241 105144330 -61505966 + CT-rich Low_complexity Low_complexity 5 91 0 2 1387 230 366 11 23 chrX 105144430 105144606 -61505690 + CT-rich Low_complexity Low_complexity 3 176 0 2 1387 351 247 22 56 chrX 105144750 105144930 -61505366 + CT-rich Low_complexity Low_complexity 5 178 0 2 1387 249 304 19 19 chrX 105145106 105145236 -61505060 + CT-rich Low_complexity Low_complexity 1 130 0 2 1387 306 0 0 0 chrX 105145329 105145363 -61504933 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1387 658 414 30 8 chrX 105145821 105146461 -61503835 - RMER15-int LTR ERVL -4089 910 257 2 1387 287 319 8 17 chrX 105147354 105147472 -61502824 - L2 LINE L2 -1042 2377 2261 2 1387 1358 229 80 25 chrX 105147576 105147975 -61502321 + Lx9 LINE L1 7223 7643 -1 2 1387 1160 267 151 29 chrX 105148039 105148455 -61501841 + Lx8 LINE L1 6769 7235 -238 2 1387 263 300 10 62 chrX 105148456 105148552 -61501744 + RMER15 LTR ERVL 373 463 -112 2 1387 333 0 0 0 chrX 105149413 105149450 -61500846 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1387 1178 69 13 0 chrX 105149520 105149679 -61500617 + L1_Mus1 LINE L1 6407 6567 0 2 1387 796 291 5 5 chrX 105149723 105149934 -61500362 + B3 SINE B2 1 211 -5 2 1387 800 290 37 78 chrX 105150041 105150415 -61499881 + ORR1E LTR MaLR 1 359 0 2 1387 28 29 0 0 chrX 105151454 105151489 -61498807 + AT_rich Low_complexity Low_complexity 1 35 0 2 1387 28 61 0 0 chrX 105151530 105151579 -61498717 + AT_rich Low_complexity Low_complexity 1 49 0 2 1387 6648 108 32 2 chrX 105151681 105153344 -61496952 - L1_Mus3 LINE L1 -7 6631 4921 2 1387 36853 26 2 7 chrX 105153343 105158334 -61491962 + L1Md_T LINE L1 631 5586 -297 2 1387 8296 40 0 0 chrX 105158334 105159330 -61490966 + L1Md_T LINE L1 5587 6582 0 2 1387 21822 121 12 22 chrX 105159330 105159520 -61490776 - L1_Mus3 LINE L1 -946 4937 4736 2 1387 416 72 14 0 chrX 105159520 105159589 -61490707 + (GTTTG)n Simple_repeat Simple_repeat 2 71 0 2 1387 1001 123 0 0 chrX 105159589 105159727 -61490569 - B1_Mm SINE Alu -9 138 1 2 1387 21822 121 12 22 chrX 105159727 105163168 -61487128 - L1_Mus3 LINE L1 -1148 4735 1343 2 1387 751 251 67 158 chrX 105163169 105163467 -61486829 + ORR1D2-int LTR MaLR 988 1258 -112 2 1387 299 293 13 0 chrX 105163550 105163625 -61486671 + ORR1D2 LTR MaLR 1 76 -294 2 1387 885 334 84 13 chrX 105163829 105164208 -61486088 - MTD LTR MaLR 0 419 14 2 1387 1834 294 29 45 chrX 105164238 105164992 -61485304 + Lx8 LINE L1 6380 7222 -251 2 1387 255 306 89 50 chrX 105165010 105165189 -61485107 + Lx8 LINE L1 7213 7398 -75 2 1387 604 284 166 34 chrX 105165293 105165672 -61484624 + L1M2 LINE L1 2932 3360 -2783 2 1387 272 300 16 91 chrX 105165779 105165900 -61484396 + MT2B2 LTR ERVL 152 263 -321 2 1387 661 272 0 0 chrX 105165803 105165939 -61484357 + B1_Mur1 SINE Alu 13 148 -1 2 1387 314 381 58 19 chrX 105165954 105166160 -61484136 + L1M2 LINE L1 3461 3674 -2469 2 1387 311 332 82 24 chrX 105166169 105166376 -61483920 + L1MD LINE L1 3721 3939 -2207 2 1387 7675 179 27 25 chrX 105166913 105168786 -61481510 + L1VL4 LINE L1 526 2433 -1126 2 1387 450 36 0 0 chrX 105168786 105168842 -61481454 + (CAA)n Simple_repeat Simple_repeat 1 56 0 2 1387 7675 174 27 30 chrX 105168842 105169094 -61481202 + L1VL4 LINE L1 2434 2656 -903 2 1387 273 133 0 0 chrX 105169090 105169135 -61481161 + L1_Mm LINE L1 4890 4934 -949 2 1387 8370 105 14 11 chrX 105169135 105171245 -61479051 - L1_Mus1 LINE L1 0 6567 4449 2 1387 14071 70 3 0 chrX 105171239 105173892 -61476404 - L1Md_F2 LINE L1 -3 6579 3922 2 1387 11943 16 3 0 chrX 105173889 105176018 -61474278 - L1Md_A LINE L1 0 6582 4447 2 1387 38425 19 3 6 chrX 105176008 105182608 -61467688 - L1Md_A LINE L1 0 6582 3 2 1387 9452 80 1 0 chrX 105182605 105183963 -61466333 - L1Md_F2 LINE L1 -1947 3936 2577 2 1387 18671 136 19 23 chrX 105183963 105188084 -61462212 - L1_Mus1 LINE L1 -1414 4469 180 2 1387 5065 104 3 1 chrX 105188084 105188855 -61461441 + Lx2B LINE L1 4923 5694 -189 2 1387 1196 164 21 42 chrX 105188855 105189091 -61461205 - RLTR9E LTR ERVK 0 409 179 2 1387 7711 206 19 20 chrX 105189263 105190920 -61459376 - ETnERV-int LTR ERVK -1658 1656 2 2 1387 2269 156 12 26 chrX 105190921 105191336 -61458960 - RLTR9E LTR ERVK 0 409 1 2 1387 3666 74 2 19 chrX 105191336 105191859 -61458437 + L1_Mus2 LINE L1 5689 6202 -364 2 1387 474 152 0 0 chrX 105191859 105191938 -61458358 + MurERV4_19-int LTR ERVK 989 1067 -4713 2 1387 5206 207 51 7 chrX 105191941 105193178 -61457118 + Lx2B LINE L1 5705 6996 -4 2 1387 388 303 66 43 chrX 105193200 105193641 -61456655 + L1M3 LINE L1 3976 4426 -1714 2 1387 22 0 0 0 chrX 105193727 105193749 -61456547 + AT_rich Low_complexity Low_complexity 1 22 0 2 1387 303 272 90 90 chrX 105193752 105193930 -61456366 + L1M3 LINE L1 4599 4776 -1367 2 1387 1383 250 55 49 chrX 105193939 105194410 -61455886 + Lx8 LINE L1 6826 7299 -174 2 1387 228 247 106 0 chrX 105194454 105194539 -61455757 + Lx8 LINE L1 7282 7375 -98 2 1387 457 125 11 11 chrX 105194745 105194834 -61455462 + (TA)n Simple_repeat Simple_repeat 2 90 0 2 1387 186 69 85 17 chrX 105194881 105194940 -61455356 + (TA)n Simple_repeat Simple_repeat 2 64 0 2 1387 1360 272 62 100 chrX 105195228 105196037 -61454259 - Lx9 LINE L1 -27 7617 6840 2 1387 835 84 0 0 chrX 105196083 105196202 -61454094 - L1_Mus1 LINE L1 0 6567 6449 2 1387 294 282 0 0 chrX 105196541 105196701 -61453595 - L1M2 LINE L1 -3930 2915 2756 2 1387 29 0 0 0 chrX 105197048 105197077 -61453219 + AT_rich Low_complexity Low_complexity 1 29 0 2 1387 276 30 0 0 chrX 105197087 105197120 -61453176 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1387 364 347 90 8 chrX 105197125 105197247 -61453049 - RSINE1 SINE B4 -29 136 5 2 1387 605 173 352 25 chrX 105198071 105198267 -61452029 - RMER6C LTR ERVK -430 260 1 2 1387 1660 249 92 25 chrX 105198713 105199165 -61451131 + MT2A LTR ERVL 1 550 -34 2 1387 219 281 43 17 chrX 105199171 105199287 -61451009 + (ATATG)n Simple_repeat Simple_repeat 2 120 0 2 1387 549 30 0 0 chrX 105199583 105199650 -61450646 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 2 1387 31228 79 5 35 chrX 105199718 105203810 -61446486 - L1Md_F2 LINE L1 0 6582 2622 2 1387 3729 48 0 4 chrX 105203810 105204269 -61446027 - L1Md_F2 LINE L1 -2 6580 6124 2 1387 31228 98 12 26 chrX 105204269 105206259 -61444037 - L1Md_F2 LINE L1 -3262 2621 217 2 1387 252 125 0 0 chrX 105206669 105206702 -61443594 + (T)n Simple_repeat Simple_repeat 1 33 0 2 1387 1086 95 0 13 chrX 105206702 105206851 -61443445 - B1_Mm SINE Alu 0 147 1 2 1387 252 125 0 0 chrX 105206851 105206865 -61443431 + (T)n Simple_repeat Simple_repeat 1 14 0 2 1387 474 18 0 0 chrX 105207684 105207739 -61442557 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1387 522 0 0 0 chrX 105207739 105207796 -61442500 + (GA)n Simple_repeat Simple_repeat 2 59 0 2 1387 613 319 101 16 chrX 105207989 105208247 -61442049 + B4A SINE B4 3 282 -10 2 1387 345 374 22 130 chrX 105208953 105208986 -61441310 + Helitron3Na_Mam RC Helitron 245 276 -210 2 1387 2996 86 5 7 chrX 105208986 105209407 -61440889 + L1Md_F2 LINE L1 6149 6568 -14 2 1387 345 374 22 130 chrX 105209407 105209643 -61440653 + Helitron3Na_Mam RC Helitron 277 485 -1 2 1387 1023 218 153 10 chrX 105210256 105210558 -61439738 - Lx2B LINE L1 -45 6931 6601 2 1387 1091 245 78 33 chrX 105210646 105210729 -61439567 + RMER17C LTR ERVK 3 85 -325 2 1387 522 0 0 0 chrX 105210729 105210787 -61439509 + (TC)n Simple_repeat Simple_repeat 2 59 0 2 1387 1091 245 78 33 chrX 105210787 105211062 -61439234 + RMER17C LTR ERVK 86 377 -33 2 1387 663 280 35 20 chrX 105211106 105211303 -61438993 + RLTR28B LTR ERVL 3 202 -279 2 1387 232 296 21 54 chrX 105211427 105211520 -61438776 + RLTR28B LTR ERVL 419 508 -16 2 1387 1074 191 27 14 chrX 105212372 105212595 -61437701 + URR1A DNA MER1_type 1 226 0 2 1387 3353 33 8 0 chrX 105212935 105213328 -61436968 - MTA_Mm LTR MaLR 0 396 1 2 1387 8258 60 9 2 chrX 105213338 105214423 -61435873 - MTA_Mm-int LTR MaLR -5 1093 1 2 1387 1326 63 11 0 chrX 105214423 105214598 -61435698 - MTA_Mm LTR MaLR 0 396 220 2 1387 2862 50 0 53 chrX 105214598 105214996 -61435300 - L1Md_F3 LINE L1 0 6584 6208 2 1387 15138 57 1 17 chrX 105215003 105217858 -61432438 - L1Md_A LINE L1 -2639 3244 441 2 1387 1874 39 4 0 chrX 105217859 105218089 -61432207 - MTA_Mm LTR MaLR -165 231 1 2 1387 28 0 0 0 chrX 105218094 105218122 -61432174 + AT_rich Low_complexity Low_complexity 1 28 0 2 1387 1437 129 0 0 chrX 105218132 105218349 -61431947 - Lx2 LINE L1 -6 6991 6775 2 1387 6575 130 8 1 chrX 105218349 105219637 -61430659 - Lx2 LINE L1 -354 6643 5346 2 1387 1277 158 96 113 chrX 105219701 105219883 -61430413 - RMER6C LTR ERVK -331 359 201 2 1387 374 0 22 0 chrX 105219883 105219929 -61430367 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 2 1387 1277 158 96 113 chrX 105219929 105219945 -61430351 - RMER6C LTR ERVK -490 200 193 2 1387 1912 141 21 25 chrX 105219945 105220272 -61430024 - Lx3B LINE L1 -5 6968 6643 2 1387 1277 158 96 113 chrX 105220272 105220435 -61429861 - RMER6C LTR ERVK -498 192 3 2 1387 1051 211 13 9 chrX 105220439 105220668 -61429628 - Lx9 LINE L1 -753 6891 6662 2 1387 5242 79 10 6 chrX 105220669 105221372 -61428924 + L1_Mus3 LINE L1 5925 6630 -8 2 1387 1281 262 10 18 chrX 105221392 105221684 -61428612 - L1_Rod LINE L1 -4441 1406 1121 2 1387 189 121 0 0 chrX 105221684 105221717 -61428579 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1387 1281 262 20 55 chrX 105221717 105221981 -61428315 - L1_Rod LINE L1 -6488 1120 867 2 1387 298 322 62 60 chrX 105222501 105222680 -61427616 - L1M2 LINE L1 -1154 4989 4811 2 1387 1792 63 4 4 chrX 105222680 105222918 -61427378 - L1_Mus2 LINE L1 -2 6564 6327 2 1387 298 322 62 60 chrX 105222918 105223108 -61427188 - L1M2 LINE L1 -1333 4810 4619 2 1387 320 283 57 69 chrX 105223099 105223346 -61426950 + L1M2 LINE L1 3646 3889 -2254 2 1387 235 263 123 44 chrX 105223390 105223617 -61426679 + Lx7 LINE L1 7450 7694 -2 2 1387 3514 88 61 9 chrX 105223679 105224218 -61426078 + Lx3_Mus LINE L1 6030 6596 -413 2 1387 555 276 43 13 chrX 105224211 105224442 -61425854 + L1M2 LINE L1 3832 4069 -2074 2 1387 29 47 0 0 chrX 105224850 105224893 -61425403 + AT_rich Low_complexity Low_complexity 1 43 0 2 1387 271 307 11 0 chrX 105225594 105225682 -61424614 + PB1D10 SINE Alu 27 115 -2 2 1387 5527 110 9 13 chrX 105225832 105226843 -61423453 - L1VL2 LINE L1 -1796 1819 811 2 1387 753 12 0 0 chrX 105226845 105226931 -61423365 + (TTCC)n Simple_repeat Simple_repeat 4 89 0 2 1387 357 24 0 0 chrX 105226931 105226973 -61423323 + (TC)n Simple_repeat Simple_repeat 2 43 0 2 1387 7277 100 20 2 chrX 105227002 105228437 -61421859 - L1_Mus1 LINE L1 0 6567 5099 2 1387 26071 94 7 73 chrX 105228436 105230946 -61419350 - L1Md_F2 LINE L1 -2 6580 4607 3 1387 1361 81 32 0 chrX 105230946 105231132 -61419164 - B2_Mm1t SINE B2 -1 192 1 3 1387 26071 115 10 119 chrX 105231132 105232869 -61417427 - L1Md_F2 LINE L1 -1277 4606 2878 3 1387 216 0 0 0 chrX 105232869 105232893 -61417403 + (TTTC)n Simple_repeat Simple_repeat 1 24 0 3 1387 26071 142 38 77 chrX 105232893 105235725 -61414571 - L1Md_F2 LINE L1 -3006 2877 98 3 1387 3840 95 2 0 chrX 105235722 105236239 -61414057 - L1VL2 LINE L1 -5508 827 310 3 1387 447 272 67 46 chrX 105236241 105236526 -61413770 + L1M2 LINE L1 4192 4482 -1661 2 1387 27 62 0 0 chrX 105236604 105236652 -61413644 + AT_rich Low_complexity Low_complexity 1 48 0 3 1387 3927 74 6 0 chrX 105236743 105237257 -61413039 - L1_Mus2 LINE L1 -2 6564 6048 3 1387 445 301 99 35 chrX 105237422 105237735 -61412561 - L1M2 LINE L1 -1993 4147 3815 3 1387 32832 56 40 5 chrX 105237841 105241690 -61408606 - L1Md_F3 LINE L1 -5 6579 2529 3 1387 2606 37 6 50 chrX 105241690 105242032 -61408264 - IAPLTR2b LTR ERVK 0 327 1 3 1387 32832 82 35 4 chrX 105242032 105243983 -61406313 - L1Md_F3 LINE L1 -3355 2528 614 3 1387 377 264 139 28 chrX 105244031 105244319 -61405977 - L1M2 LINE L1 -2555 3585 3266 3 1387 5024 116 9 3 chrX 105244355 105245110 -61405186 - Lx3A LINE L1 -2 6979 6220 3 1387 3718 98 27 4 chrX 105245110 105245868 -61404428 + Lx3_Mus LINE L1 5399 6168 -841 3 1387 593 240 61 114 chrX 105245890 105245935 -61404361 - L1M2 LINE L1 -2907 3233 3185 3 1387 4890 126 80 6 chrX 105245935 105246747 -61403549 - Lx LINE L1 -4 6650 5779 3 1387 620 240 61 114 chrX 105246747 105247271 -61403025 - L1M2 LINE L1 -2956 3184 2694 3 1387 10641 170 31 6 chrX 105247365 105249469 -61400827 - Lx2B LINE L1 -734 6266 4098 3 1387 5903 51 4 9 chrX 105249469 105250208 -61400088 + L1Md_F2 LINE L1 5846 6580 -2 3 1387 10641 167 31 6 chrX 105250208 105250530 -61399766 - Lx2B LINE L1 -1780 4097 3766 3 173 1486 186 41 0 chrX 105250542 105250860 -61399436 - Lx2B LINE L1 -4062 1815 1485 3 1388 1050 132 16 37 chrX 105251542 105251731 -61398565 + LTRIS3 LTR ERV1 328 512 0 3 1388 320 352 86 51 chrX 105253063 105253437 -61396859 + MLT1B LTR MaLR 1 387 -3 3 1388 282 368 14 14 chrX 105253531 105253677 -61396619 - Charlie2b DNA MER1_type -2630 152 7 3 1388 203 162 0 0 chrX 105253898 105253935 -61396361 + CT-rich Low_complexity Low_complexity 2 38 0 3 1388 366 129 0 0 chrX 105253935 105253997 -61396299 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 1388 251 28 28 0 chrX 105253997 105254033 -61396263 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 1388 224 300 50 76 chrX 105254297 105254416 -61395880 + PB1D7 SINE Alu 5 120 0 3 1388 890 272 64 32 chrX 105254975 105255382 -61394914 + L1M2 LINE L1 4757 5176 -967 3 1388 31 0 0 0 chrX 105256290 105256321 -61393975 + AT_rich Low_complexity Low_complexity 1 31 0 3 1388 1219 41 7 0 chrX 105256685 105256831 -61393465 + B1_Mm SINE Alu 1 147 0 3 1388 223 163 0 0 chrX 105256835 105256878 -61393418 + A-rich Low_complexity Low_complexity 2 44 0 3 1388 21 36 0 0 chrX 105257002 105257030 -61393266 + AT_rich Low_complexity Low_complexity 1 28 0 3 1388 663 13 0 0 chrX 105257832 105257908 -61392388 + (GGAA)n Simple_repeat Simple_repeat 4 79 0 3 1388 21 0 0 0 chrX 105258464 105258485 -61391811 + AT_rich Low_complexity Low_complexity 1 21 0 3 1388 7250 154 53 7 chrX 105258501 105260027 -61390269 - Lx4A LINE L1 -67 6991 5401 3 1388 180 0 0 0 chrX 105260027 105260047 -61390249 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 1388 4975 129 53 1 chrX 105260047 105260378 -61389918 - Lx4A LINE L1 -477 5400 5030 3 1388 2226 174 58 0 chrX 105260381 105260813 -61389483 - Lx4A LINE L1 -6204 882 426 3 1388 413 348 43 24 chrX 105261490 105261699 -61388597 - B3 SINE B2 -3 213 1 3 1388 473 145 45 9 chrX 105261743 105261854 -61388442 + Lx2B LINE L1 6884 6998 -2 3 1388 23 33 0 0 chrX 105262253 105262283 -61388013 + AT_rich Low_complexity Low_complexity 1 30 0 3 1388 683 237 220 53 chrX 105262438 105262622 -61387674 + ORR1C2 LTR MaLR 10 234 -150 3 1388 201 74 0 0 chrX 105262622 105262649 -61387647 + (CCTG)n Simple_repeat Simple_repeat 4 30 0 3 1388 683 210 239 57 chrX 105262649 105262775 -61387521 + ORR1C2 LTR MaLR 235 378 -6 3 1388 433 245 19 13 chrX 105263739 105263896 -61386400 - L1MA5 LINE L1 -48 6252 6095 3 1388 4252 94 34 0 chrX 105264062 105264655 -61385641 + Lx LINE L1 5703 6315 -339 3 1388 296 272 125 0 chrX 105264796 105264974 -61385322 - L1MA5 LINE L1 -259 6041 5843 3 1388 2964 40 24 8 chrX 105265823 105266199 -61384097 + L1Md_F2 LINE L1 6198 6579 -3 3 1388 38118 9 0 1 chrX 105266309 105272103 -61378193 + L1Md_A LINE L1 1 5586 -297 3 1388 8969 4 0 0 chrX 105272103 105273098 -61377198 + L1Md_A LINE L1 5587 6581 -1 3 1388 505 356 40 37 chrX 105273171 105273547 -61376749 + MER20B DNA MER1_type 234 610 -173 3 1388 533 274 0 9 chrX 105273535 105273661 -61376635 - B1_Mur3 SINE Alu -23 126 2 3 1388 3622 60 4 2 chrX 105273976 105274442 -61375854 + L1Md_F2 LINE L1 6113 6579 -3 3 1388 27 0 0 0 chrX 105275668 105275695 -61374601 + AT_rich Low_complexity Low_complexity 1 27 0 3 1388 197 339 16 0 chrX 105276668 105276730 -61373566 + MIRb SINE MIR 57 119 -149 3 1388 7072 99 71 12 chrX 105276864 105277896 -61372400 - Lx3_Mus LINE L1 0 7009 5910 3 1388 654 13 0 0 chrX 105277896 105277971 -61372325 + (TTC)n Simple_repeat Simple_repeat 2 76 0 3 1388 7072 99 71 12 chrX 105277971 105278047 -61372249 - Lx3_Mus LINE L1 -1100 5909 5835 3 1388 447 291 161 7 chrX 105278057 105278206 -61372090 - MTD LTR MaLR -13 406 235 3 1388 1120 237 13 4 chrX 105278604 105278833 -61371463 - MTD LTR MaLR -188 231 1 3 1388 411 21 0 0 chrX 105279059 105279107 -61371189 + (A)n Simple_repeat Simple_repeat 1 48 0 3 1388 887 131 0 0 chrX 105280117 105280254 -61370042 - URR1B DNA MER1_type -3 222 86 3 1388 237 302 118 32 chrX 105280367 105280613 -61369683 - L1MEc LINE L1 -5471 929 663 3 1388 361 288 191 62 chrX 105280826 105281082 -61369214 - L1MEc LINE L1 -6005 395 107 3 1388 929 232 14 0 chrX 105281122 105281329 -61368967 + B3 SINE B2 1 210 -6 3 1388 308 415 22 7 chrX 105282128 105282264 -61368032 + LTR16B LTR ERVL 85 222 -241 3 1388 202 343 35 50 chrX 105282496 105282637 -61367659 - MIR SINE MIR -19 243 105 3 1388 2587 266 41 71 chrX 105284425 105284845 -61365451 + Lx9 LINE L1 5934 6311 -1333 3 1388 216 111 0 0 chrX 105284845 105284881 -61365415 + (CATATA)n Simple_repeat Simple_repeat 6 41 0 3 1388 2587 266 41 71 chrX 105284881 105284904 -61365392 + Lx9 LINE L1 6312 6332 -1312 3 1388 3104 107 22 0 chrX 105284904 105285354 -61364942 - Lx2 LINE L1 -1 6996 6537 3 1388 2587 266 41 71 chrX 105285354 105285987 -61364309 + Lx9 LINE L1 6333 6977 -667 3 1388 1230 172 43 154 chrX 105285989 105286359 -61363937 - ORR1A4 LTR MaLR 0 329 1 3 1388 2419 246 29 12 chrX 105286360 105287017 -61363279 + Lx9 LINE L1 6977 7644 0 3 1388 2841 75 19 12 chrX 105287148 105287390 -61362906 + BGLII LTR ERVK 1 250 -171 3 1388 1158 122 0 0 chrX 105287390 105287570 -61362726 + (GAA)n Simple_repeat Simple_repeat 1 180 0 3 1388 2841 75 19 12 chrX 105287570 105287745 -61362551 + BGLII LTR ERVK 251 421 0 3 1388 574 132 35 0 chrX 105288128 105288241 -61362055 + RMER3D-int LTR ERVK 489 583 -2259 3 1388 1948 171 116 17 chrX 105288303 105288776 -61361520 + RMER3D-int LTR ERVK 1014 1533 -1309 3 1388 545 218 32 58 chrX 105288816 105288972 -61361324 + RMER3D-int LTR ERVK 1541 1692 -1150 3 1388 2339 195 92 13 chrX 105288980 105289609 -61360687 + MYSERV16_I-int LTR ERVK 1306 1984 -342 3 1388 7170 97 25 0 chrX 105289623 105289835 -61360461 - L1_Mus3 LINE L1 -2 6636 6418 3 1388 357 24 0 0 chrX 105289835 105289877 -61360419 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 1388 8136 104 13 1 chrX 105289877 105291561 -61358735 - L1_Mus3 LINE L1 -221 6417 4713 3 1388 5319 93 8 1 chrX 105291564 105292337 -61357959 + L1_Mus3 LINE L1 3878 4655 -1228 3 1388 955 193 108 3 chrX 105292339 105292646 -61357650 + MYSERV16_I-int LTR ERVK 1988 2326 0 3 1388 2229 66 48 202 chrX 105292648 105293143 -61357153 + BGLII LTR ERVK 3 421 0 3 1388 2965 95 7 16 chrX 105293163 105293612 -61356684 - L1_Mus3 LINE L1 -6 6632 6188 3 1388 462 300 65 17 chrX 105293628 105293920 -61356376 - L1MA4 LINE L1 -162 6138 5833 3 1388 373 125 80 0 chrX 105293958 105294046 -61356250 - Lx9 LINE L1 -1 7643 7549 3 1388 420 20 0 0 chrX 105294132 105294181 -61356115 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1388 315 0 0 0 chrX 105294181 105294215 -61356081 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1388 833 256 73 4 chrX 105294271 105294578 -61355718 - L1MA4 LINE L1 -350 5818 5492 3 1388 229 250 177 0 chrX 105294615 105294711 -61355585 + L1MB1 LINE L1 5861 5973 -216 3 1388 752 224 7 20 chrX 105294713 105294863 -61355433 + B1_Mur4 SINE Alu 1 148 -2 3 1388 225 258 70 39 chrX 105294863 105294992 -61355304 + L1MB1 LINE L1 5996 6128 -61 3 1388 527 303 35 14 chrX 105295122 105295266 -61355030 + B1_Mur1 SINE Alu 1 147 -2 3 1388 1229 53 12 0 chrX 105296144 105296314 -61353982 + L1Md_F2 LINE L1 6396 6567 -15 3 1388 35786 37 3 8 chrX 105296328 105301527 -61348769 + L1Md_T LINE L1 415 5586 -297 3 1388 8350 38 0 0 chrX 105301527 105302523 -61347773 + L1Md_T LINE L1 5587 6582 0 3 1388 326 77 58 0 chrX 105302921 105302973 -61347323 - MTD LTR MaLR -12 407 353 3 1388 374 344 13 6 chrX 105302975 105303133 -61347163 - Lx9 LINE L1 -777 6867 6709 3 1388 23 33 0 0 chrX 105304617 105304647 -61345649 + AT_rich Low_complexity Low_complexity 1 30 0 3 1388 259 370 25 0 chrX 105304695 105304814 -61345482 + LTR83 LTR ERVL 657 778 -2 3 1388 596 170 39 19 chrX 105305593 105305749 -61344547 + L1_Rod LINE L1 1623 1781 -4066 3 1388 14656 59 1 0 chrX 105305751 105308368 -61341928 - L1Md_F2 LINE L1 -1 6581 3963 3 1388 3522 98 2 7 chrX 105308340 105308877 -61341419 - L1Md_F2 LINE L1 -2580 3303 2770 3 1388 3377 71 2 0 chrX 105308877 105309314 -61340982 + L1Md_F2 LINE L1 5148 5585 -298 3 1388 7543 70 1 1 chrX 105309315 105310296 -61340000 + L1Md_F2 LINE L1 5587 6567 -15 3 1388 314 214 36 0 chrX 105310297 105310381 -61339915 - MLT2D LTR ERVL -321 93 7 3 1388 21 0 0 0 chrX 105311059 105311080 -61339216 + AT_rich Low_complexity Low_complexity 1 21 0 3 1388 37917 42 0 3 chrX 105311258 105317504 -61332792 - L1Md_T LINE L1 0 6585 261 3 1388 1568 182 3 26 chrX 105317574 105317879 -61332417 + Lx3C LINE L1 6672 6969 -7 3 1388 191 36 0 35 chrX 105317887 105317916 -61332380 + (TAA)n Simple_repeat Simple_repeat 3 30 0 3 1388 316 345 54 6 chrX 105318051 105318217 -61332079 + L1M2 LINE L1 1737 1910 -5034 3 1388 592 203 195 20 chrX 105318323 105318599 -61331697 - Lx9 LINE L1 0 7644 7321 3 1388 473 312 81 27 chrX 105318839 105319135 -61331161 + L1M2 LINE L1 2060 2593 -4256 3 1388 22 56 0 0 chrX 105319441 105319477 -61330819 + AT_rich Low_complexity Low_complexity 1 36 0 3 1388 1126 49 21 0 chrX 105319701 105319844 -61330452 - B1_Mus1 SINE Alu 0 148 3 3 1388 2087 277 117 22 chrX 105320018 105320799 -61329497 + Lx8 LINE L1 6191 7045 -428 3 1388 771 274 5 20 chrX 105320800 105321001 -61329295 - B3 SINE B2 -15 201 4 3 1388 207 0 0 0 chrX 105321126 105321149 -61329147 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 1388 1258 302 100 18 chrX 105321188 105321747 -61328549 + Lx8 LINE L1 6868 7472 -1 3 1388 442 294 20 0 chrX 105322073 105322219 -61328077 + B1F SINE Alu 1 149 0 3 1388 740 352 47 15 chrX 105322409 105322683 -61327613 - B4A SINE B4 -9 283 1 3 1388 274 266 7 59 chrX 105322719 105322855 -61327441 + L1M2 LINE L1 2952 3080 -3765 3 1388 435 313 40 36 chrX 105322928 105323203 -61327093 + L1M2 LINE L1 3256 3531 -3314 3 1388 756 244 73 19 chrX 105323238 105323403 -61326893 + B3 SINE B2 1 175 -41 3 1388 587 14 14 0 chrX 105323403 105323475 -61326821 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 3 1388 756 244 73 19 chrX 105323475 105323514 -61326782 + B3 SINE B2 176 215 -1 3 1388 549 156 0 0 chrX 105323628 105323724 -61326572 + GA-rich Low_complexity Low_complexity 2 97 0 3 1388 1405 238 42 19 chrX 105323772 105324132 -61326164 + RLTR16 LTR ERVK 138 505 0 3 1388 485 288 35 71 chrX 105324250 105324504 -61325792 + RMER3D-int LTR ERVK 95 339 -2503 3 1388 3032 132 20 4 chrX 105324622 105325122 -61325174 - L1_Mur2 LINE L1 -1916 3961 3454 4 1388 975 107 0 26 chrX 105325363 105325517 -61324779 + L1_Mur2 LINE L1 3728 3877 -2000 4 1388 281 129 0 31 chrX 105325540 105325604 -61324692 - Lx LINE L1 -1 6653 6592 4 1388 326 281 44 82 chrX 105325604 105325763 -61324533 + RMER3D-int LTR ERVK 1163 1315 -1527 3 1388 402 64 4 0 chrX 105325764 105325825 -61324471 + Lx5 LINE L1 5777 5839 -1219 4 1388 2301 130 39 6 chrX 105325982 105326405 -61323891 + MYSERV16_I-int LTR ERVK 1067 1499 -827 4 1388 513 84 0 0 chrX 105326405 105326476 -61323820 + (TA)n Simple_repeat Simple_repeat 2 72 0 4 1388 1508 200 77 84 chrX 105326476 105326661 -61323635 + MYSERV16_I-int LTR ERVK 2107 2301 -541 4 1388 626 209 16 11 chrX 105326663 105326822 -61323474 + ORR1B1 LTR MaLR 120 301 -93 4 1388 3009 119 7 357 chrX 105326822 105327829 -61322467 + L1VL2 LINE L1 426 954 -5680 4 1388 3220 83 69 0 chrX 105327829 105328277 -61322019 + L1_Mus1 LINE L1 6089 6567 0 4 1388 9204 146 10 234 chrX 105328277 105329111 -61321185 + L1VL2 LINE L1 955 1773 -4113 4 1388 3747 79 2 0 chrX 105329111 105329605 -61320691 + L1_Mus2 LINE L1 6072 6566 0 4 1388 9204 172 12 118 chrX 105329605 105330588 -61319708 + L1VL2 LINE L1 1774 2652 -3234 4 1388 217 0 61 0 chrX 105330588 105330621 -61319675 + (TTG)n Simple_repeat Simple_repeat 2 36 0 4 1388 9204 172 12 118 chrX 105330621 105331402 -61318894 + L1VL2 LINE L1 2653 3291 -2595 4 1388 24 32 0 0 chrX 105331563 105331594 -61318702 + AT_rich Low_complexity Low_complexity 1 31 0 4 1388 2366 166 69 13 chrX 105331995 105332543 -61317753 + MYSERV16_I-int LTR ERVK 1743 2321 -5 4 1388 1671 242 60 16 chrX 105332548 105333032 -61317264 + RLTR16 LTR ERVK 1 505 0 4 1388 633 90 0 0 chrX 105333235 105333335 -61316961 + L1_Mus1 LINE L1 6468 6567 0 4 1388 21 0 0 0 chrX 105333335 105333356 -61316940 + AT_rich Low_complexity Low_complexity 1 21 0 4 1388 31279 77 1 1 chrX 105333399 105338521 -61311775 + L1Md_F LINE L1 390 5510 -373 4 1388 712 112 9 0 chrX 105338521 105338637 -61311659 + L1_Mus1 LINE L1 6451 6567 0 4 1388 21 36 0 0 chrX 105338640 105338668 -61311628 + AT_rich Low_complexity Low_complexity 1 28 0 4 1388 636 250 58 19 chrX 105338677 105338885 -61311411 + B3 SINE B2 1 216 0 4 1388 307 350 19 28 chrX 105338934 105339040 -61311256 + RSINE1 SINE B4 58 162 -3 4 1388 376 259 25 0 chrX 105339124 105339205 -61311091 + B1_Mus1 SINE Alu 1 83 -65 4 1388 180 0 0 0 chrX 105339437 105339457 -61310839 + (CAA)n Simple_repeat Simple_repeat 1 20 0 4 1388 1128 75 7 0 chrX 105339542 105339688 -61310608 + B1_Mus2 SINE Alu 1 147 0 4 1388 315 290 101 25 chrX 105339720 105339879 -61310417 - MER3 DNA MER1_type -38 171 1 4 1388 1148 210 94 37 chrX 105339953 105340250 -61310046 + MTD LTR MaLR 4 317 -102 4 1388 1941 108 80 41 chrX 105340416 105340755 -61309541 + MTB_Mm LTR MaLR 3 354 -53 4 1388 1192 278 117 13 chrX 105340760 105341463 -61308833 + L1M3 LINE L1 3177 3952 -2188 4 1388 957 327 92 11 chrX 105341501 105341677 -61308619 + Lx8 LINE L1 6668 6850 -623 4 1388 1064 114 0 6 chrX 105341677 105341854 -61308442 + (TTC)n Simple_repeat Simple_repeat 3 178 0 4 1388 957 327 92 11 chrX 105341854 105342132 -61308164 + Lx8 LINE L1 6851 7159 -314 4 1388 279 0 0 0 chrX 105342265 105342296 -61308000 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 4 1388 500 270 195 19 chrX 105342869 105343182 -61307114 + RLTR9A LTR ERVK 1 368 0 4 1388 855 234 66 8 chrX 105343280 105343521 -61306775 - Lx7 LINE L1 -277 7419 7165 4 1388 1591 152 44 17 chrX 105343621 105343915 -61306381 + Lx3C LINE L1 6673 6974 -2 4 1388 30 0 0 0 chrX 105343916 105343946 -61306350 + AT_rich Low_complexity Low_complexity 1 30 0 4 1388 3257 222 13 24 chrX 105344146 105344827 -61305469 + Lx6 LINE L1 6069 6742 -718 4 1388 414 0 0 0 chrX 105344827 105344873 -61305423 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 1388 240 111 0 0 chrX 105344873 105344909 -61305387 + (GGA)n Simple_repeat Simple_repeat 2 37 0 4 1388 810 279 103 100 chrX 105344909 105345649 -61304647 + MER31-int LTR ERV1 3154 3895 -1041 4 1388 256 164 59 15 chrX 105345874 105345942 -61304354 + A-rich Low_complexity Low_complexity 4 74 0 4 1388 412 318 78 39 chrX 105346201 105346456 -61303840 + MER31-int LTR ERV1 4207 4471 -885 4 1388 25 31 0 0 chrX 105346952 105346984 -61303312 + AT_rich Low_complexity Low_complexity 1 32 0 4 1388 29 28 0 0 chrX 105347297 105347333 -61302963 + AT_rich Low_complexity Low_complexity 1 36 0 4 1388 433 325 6 71 chrX 105347333 105347502 -61302794 - RSINE1 SINE B4 -4 161 4 4 1388 488 126 11 0 chrX 105347693 105347780 -61302516 + (TAAA)n Simple_repeat Simple_repeat 2 89 0 4 1388 957 362 47 35 chrX 105347808 105348235 -61302061 - MTE-int LTR MaLR -323 1257 826 4 1388 188 135 0 26 chrX 105348270 105348308 -61301988 + T-rich Low_complexity Low_complexity 4 40 0 4 1388 234 0 0 0 chrX 105348323 105348349 -61301947 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 4 1388 508 323 69 5 chrX 105348640 105348842 -61301454 - MTE-int LTR MaLR -1199 381 167 4 1388 413 250 42 42 chrX 105348979 105349121 -61301175 + MER31B LTR ERV1 324 465 -1 4 1388 759 184 21 0 chrX 105349174 105349315 -61300981 - B1_Mus1 SINE Alu 0 148 5 4 1388 276 30 0 0 chrX 105349351 105349384 -61300912 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 1388 528 16 0 0 chrX 105349384 105349445 -61300851 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 1388 4999 148 39 18 chrX 105349648 105350497 -61299799 - Lx4A LINE L1 -1 7057 6191 4 1388 26 0 0 0 chrX 105350797 105350823 -61299473 + AT_rich Low_complexity Low_complexity 1 26 0 4 1388 464 126 8 83 chrX 105350870 105350991 -61299305 - L1Md_F2 LINE L1 -1 6581 6470 4 1388 385 279 78 43 chrX 105350994 105351327 -61298969 - L1MA4 LINE L1 -283 6017 5683 4 1388 247 348 68 30 chrX 105351373 105351637 -61298659 + L1M2 LINE L1 5354 5627 -670 4 1388 3002 327 67 35 chrX 105351725 105353358 -61296938 - Lx8 LINE L1 -11 7462 5779 4 1388 8830 114 5 12 chrX 105353340 105355494 -61294802 - L1_Mus3 LINE L1 0 6638 4500 4 1388 399 263 9 17 chrX 105355491 105355607 -61294689 - Lx7 LINE L1 -1900 5796 5682 4 1388 1598 274 55 28 chrX 105355689 105356123 -61294173 + L1_Mur3 LINE L1 5139 5588 -292 4 1388 1913 167 12 0 chrX 105356123 105356446 -61293850 + ORR1A2 LTR MaLR 1 327 0 4 1388 1598 274 55 28 chrX 105356446 105356627 -61293669 + L1_Mur3 LINE L1 5589 5771 -109 4 1388 277 321 83 28 chrX 105356960 105357213 -61293083 + Lx6 LINE L1 158 424 -7304 4 1388 1436 198 44 68 chrX 105357271 105358047 -61292249 + Lx6 LINE L1 860 1608 -4269 4 1388 3103 132 4 6 chrX 105358052 105358541 -61291755 - Lx2 LINE L1 -591 6406 5919 4 1388 3376 151 7 31 chrX 105358541 105358930 -61291366 + Lx2 LINE L1 6427 6816 -181 4 1388 2691 78 0 3 chrX 105358930 105359277 -61291019 - ORR1A1 LTR MaLR 0 346 1 4 1388 3376 151 7 31 chrX 105359277 105359468 -61290828 + Lx2 LINE L1 6817 6993 -4 4 1388 2856 189 25 106 chrX 105359468 105359939 -61290357 + Lx6 LINE L1 1617 2055 -3825 4 1388 315 0 0 0 chrX 105359939 105359974 -61290322 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1388 2856 189 25 106 chrX 105359974 105360377 -61289919 + Lx6 LINE L1 2056 2420 -3460 4 1388 296 254 8 34 chrX 105360398 105360516 -61289780 + T-rich Low_complexity Low_complexity 2 116 0 4 1388 7979 101 3 6 chrX 105360538 105362236 -61288060 - L1_Mus1 LINE L1 -177 6390 4699 4 1388 753 223 0 18 chrX 105362236 105362405 -61287891 + Lx6 LINE L1 2419 2584 -3296 4 1388 610 201 85 130 chrX 105362408 105362585 -61287711 + MT2B LTR ERVL 119 287 -314 4 1388 279 154 0 0 chrX 105362560 105362599 -61287697 + PB1D9 SINE Alu 6 44 -76 4 1388 1476 165 33 12 chrX 105362664 105362961 -61287335 + RMER6C LTR ERVK 384 690 0 4 1388 1415 78 63 0 chrX 105362980 105363185 -61287111 + L1_Mus2 LINE L1 6348 6565 -1 4 1388 12113 198 103 20 chrX 105363201 105366601 -61283695 + Lx6 LINE L1 2604 6283 -1177 4 1388 2555 261 50 28 chrX 105366604 105367251 -61283045 + Lx6 LINE L1 6763 7421 -39 4 1388 4735 58 3 5 chrX 105367251 105367863 -61282433 + L1Md_F2 LINE L1 5966 6576 -6 4 1388 2555 261 50 28 chrX 105367863 105367892 -61282404 + Lx6 LINE L1 7422 7454 -6 4 1388 780 326 51 19 chrX 105368106 105368478 -61281818 - MER31A LTR ERV1 -101 384 1 4 1388 693 339 66 19 chrX 105368710 105368969 -61281327 + B4A SINE B4 1 271 -21 4 1388 219 69 0 0 chrX 105368982 105369011 -61281285 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1388 314 347 77 14 chrX 105369095 105369317 -61280979 - L1M5 LINE L1 -392 5848 5613 4 1388 24 53 0 0 chrX 105369719 105369757 -61280539 + AT_rich Low_complexity Low_complexity 1 38 0 4 1388 1238 302 34 64 chrX 105370024 105370664 -61279632 + Lx8 LINE L1 5597 6217 -1256 4 1388 634 284 56 52 chrX 105370676 105370944 -61279352 - Lx9 LINE L1 -515 7129 6861 4 1388 14518 18 0 0 chrX 105371036 105373428 -61276868 - L1Md_T LINE L1 0 6582 4191 4 1388 1219 192 217 7 chrX 105374719 105375028 -61275268 + ORR1D1 LTR MaLR 1 374 0 4 1388 231 146 0 0 chrX 105375839 105375880 -61274416 + (CAA)n Simple_repeat Simple_repeat 2 42 0 4 1388 419 319 35 35 chrX 105376812 105376984 -61273312 + RMER15 LTR ERVL 336 507 -68 4 1388 855 329 6 38 chrX 105377354 105377625 -61272671 + RMER15-int LTR ERVL 1214 1478 -3521 4 1388 1362 241 45 11 chrX 105377625 105377981 -61272315 + ORR1D2 LTR MaLR 3 370 0 4 1388 855 329 6 38 chrX 105377981 105378022 -61272274 + RMER15-int LTR ERVL 1479 1516 -3483 4 1388 449 279 8 37 chrX 105378964 105379098 -61271198 + RMER15 LTR ERVL 350 479 -96 4 1388 354 219 103 62 chrX 105379229 105379375 -61270921 - L1MA5 LINE L1 -3 6297 6146 4 1388 1016 308 120 6 chrX 105380322 105380991 -61269305 - L1MA5 LINE L1 -215 6085 5341 4 1388 261 128 0 0 chrX 105381393 105381440 -61268856 + (TGG)n Simple_repeat Simple_repeat 1 47 0 4 1388 186 43 0 0 chrX 105381446 105381469 -61268827 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1388 413 19 19 0 chrX 105381551 105381605 -61268691 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 4 173 3161 214 67 14 chrX 105381787 105382444 -61267852 + Lx5 LINE L1 6359 7050 0 4 1389 637 281 80 18 chrX 105382628 105383027 -61267269 - L1MA5 LINE L1 -3133 3010 2587 4 1389 12288 74 42 2 chrX 105383144 105384583 -61265713 - L1Md_F2 LINE L1 -42 6540 4937 4 1389 3831 56 29 18 chrX 105384583 105385096 -61265200 - MURVY-LTR LTR ERV1 0 519 1 4 1389 12288 100 89 4 chrX 105385096 105386208 -61264088 - L1Md_F2 LINE L1 -947 4936 3827 4 1389 3085 113 510 0 chrX 105386190 105386961 -61263335 - L1Md_F2 LINE L1 -2427 3456 2293 4 1389 5216 219 66 48 chrX 105386956 105388904 -61261392 + Lx5 LINE L1 4804 6795 -255 4 1389 188 35 35 0 chrX 105388904 105388933 -61261363 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 1389 1125 50 0 28 chrX 105388933 105389077 -61261219 - B1_Mus1 SINE Alu -8 140 1 4 1389 4872 244 62 50 chrX 105389077 105389368 -61260928 + Lx5 LINE L1 6796 7049 -1 4 1389 383 314 91 30 chrX 105389535 105389732 -61260564 - MER102a DNA MER1_type -10 320 112 4 1389 211 377 78 13 chrX 105389789 105389942 -61260354 + L2b LINE L2 3213 3375 0 4 1389 197 368 37 37 chrX 105391044 105391205 -61259091 - L2c LINE L2 -36 3351 3191 4 1389 785 289 6 0 chrX 105391227 105391386 -61258910 + B3A SINE B2 1 160 -38 4 1389 540 0 0 0 chrX 105391388 105391448 -61258848 + (TC)n Simple_repeat Simple_repeat 1 60 0 4 1389 270 0 0 0 chrX 105391448 105391477 -61258819 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1389 804 337 78 7 chrX 105391637 105391930 -61258366 + MTE2a LTR MaLR 45 358 -21 4 1389 2375 238 49 33 chrX 105392021 105392773 -61257523 + Lx5 LINE L1 310 1073 -6655 5 1389 2606 212 6 6 chrX 105392768 105393284 -61257012 + Lx5 LINE L1 6144 6659 -391 5 1389 1096 262 49 17 chrX 105393288 105393634 -61256662 + RLTR15 LTR ERVK 1 357 -2 5 1389 1585 26 0 21 chrX 105393661 105393854 -61256442 + B2_Mm1t SINE B2 2 190 -3 5 1389 30 0 0 0 chrX 105393854 105393884 -61256412 + AT_rich Low_complexity Low_complexity 1 30 0 5 1389 1042 257 126 9 chrX 105393884 105394202 -61256094 + Lx5 LINE L1 6675 7029 -21 5 1389 222 37 0 0 chrX 105394202 105394229 -61256067 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 5 1389 2529 234 45 42 chrX 105394238 105395316 -61254980 + Lx6 LINE L1 5351 6455 -1005 5 1389 422 0 38 0 chrX 105395316 105395369 -61254927 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 5 1389 1083 248 60 0 chrX 105395369 105395671 -61254625 + Lx6 LINE L1 7126 7445 -15 5 1389 21 82 0 0 chrX 105395874 105395923 -61254373 + AT_rich Low_complexity Low_complexity 1 49 0 5 1389 201 182 0 0 chrX 105396024 105396079 -61254217 + (CAGA)n Simple_repeat Simple_repeat 4 58 0 5 1389 24 100 0 0 chrX 105396190 105396270 -61254026 + AT_rich Low_complexity Low_complexity 1 80 0 5 1389 2309 177 50 15 chrX 105396291 105396876 -61253420 + Lx6 LINE L1 2862 3466 -2414 5 1389 1591 30 9 38 chrX 105396876 105397087 -61253209 + L1Md_F3 LINE L1 6379 6583 -1 5 1389 562 210 49 25 chrX 105397127 105397249 -61253047 + B3 SINE B2 6 130 -86 5 1389 1030 178 94 29 chrX 105397306 105397565 -61252731 - ORR1A4 LTR MaLR -8 386 93 5 1389 921 199 87 8 chrX 105397565 105397819 -61252477 + Lx6 LINE L1 3779 4052 -1828 5 1389 635 240 19 0 chrX 105397817 105397971 -61252325 + Lx6 LINE L1 4783 4939 -941 5 1389 2728 40 109 0 chrX 105397971 105398321 -61251975 + RLTR10 LTR ERVK 1 388 -2 5 1389 4760 106 47 133 chrX 105398323 105398344 -61251952 + RLTR10-int LTR ERVK 1 21 -1966 5 1389 2325 75 119 11 chrX 105398344 105398696 -61251600 - RLTR10 LTR ERVK 0 390 1 5 1389 4760 106 47 133 chrX 105398696 105399759 -61250537 + RLTR10-int LTR ERVK 22 991 -996 5 1389 453 289 95 19 chrX 105399936 105400211 -61250085 + RLTR10-int LTR ERVK 894 1150 -5392 5 1389 7832 45 5 2 chrX 105400291 105401283 -61249013 + RLTR10-int LTR ERVK 990 1984 -3 5 1389 2690 54 109 0 chrX 105401283 105401633 -61248663 + RLTR10 LTR ERVK 1 388 -2 5 1389 3224 194 58 25 chrX 105401635 105401934 -61248362 + Lx6 LINE L1 4933 5228 -649 5 1389 576 0 0 0 chrX 105401934 105401998 -61248298 + (TA)n Simple_repeat Simple_repeat 2 65 0 5 1389 3224 194 58 25 chrX 105401998 105402471 -61247825 + Lx6 LINE L1 5229 5730 -147 5 1389 327 292 36 7 chrX 105402466 105402604 -61247692 + Lx6 LINE L1 6030 6171 -1289 5 1389 777 193 7 0 chrX 105402615 105402768 -61247528 - B2_Mm2 SINE B2 -25 168 9 5 1389 825 286 4 56 chrX 105402797 105402878 -61247418 + Lx6 LINE L1 7179 7256 -204 5 1389 3462 79 13 2 chrX 105402878 105403348 -61246948 + MT2C_Mm LTR ERVL 1 475 0 5 1389 825 286 4 56 chrX 105403348 105403536 -61246760 + Lx6 LINE L1 7257 7434 -26 5 1389 32 71 0 12 chrX 105403547 105403615 -61246681 + AT_rich Low_complexity Low_complexity 1 68 0 5 1389 568 182 14 21 chrX 105403615 105403755 -61246541 - Lx4B LINE L1 -4 7054 6916 5 1389 32 71 0 12 chrX 105403755 105403771 -61246525 + AT_rich Low_complexity Low_complexity 1 16 0 5 1389 243 220 0 0 chrX 105403883 105403974 -61246322 + (CA)n Simple_repeat Simple_repeat 2 92 0 5 1389 459 220 50 20 chrX 105404231 105404411 -61245885 + ORR1D2 LTR MaLR 186 374 0 5 1389 492 165 0 0 chrX 105404645 105404730 -61245566 - L1_Mm LINE L1 -342 5541 5457 5 1389 6339 86 81 4 chrX 105404728 105405758 -61244538 + L1_Mus3 LINE L1 5530 6638 0 5 1389 5293 117 44 13 chrX 105405759 105406715 -61243581 + Lx LINE L1 5481 6467 -187 5 1389 2668 83 7 72 chrX 105406721 105407136 -61243160 - RLTR10 LTR ERVK -2 388 1 5 1389 8015 38 1 3 chrX 105407136 105408135 -61242161 - RLTR10-int LTR ERVK -1 1986 990 5 1389 416 304 20 20 chrX 105408216 105408499 -61241797 - IAP-d-int LTR ERVK -5522 1020 847 5 1389 4570 80 149 110 chrX 105408665 105409619 -61240677 - RLTR10-int LTR ERVK -996 991 1 5 1389 2521 109 10 5 chrX 105409621 105410007 -61240289 - RLTR10 LTR ERVK -2 388 1 5 1389 932 143 5 42 chrX 105410007 105410197 -61240099 + Lx LINE L1 6466 6648 -6 5 1389 201 29 88 0 chrX 105410330 105410364 -61239932 + (TAAAA)n Simple_repeat Simple_repeat 5 41 0 5 1389 1242 351 40 28 chrX 105410423 105411455 -61238841 + Lx9 LINE L1 6270 7473 -171 5 1389 282 321 39 16 chrX 105411502 105411809 -61238487 + L1M2 LINE L1 2278 2591 -3552 5 1389 34628 34 2 7 chrX 105411811 105416971 -61233325 + L1Md_T LINE L1 460 5585 -298 5 1389 8384 37 0 0 chrX 105416972 105417967 -61232329 + L1Md_T LINE L1 5587 6581 -1 5 1389 468 277 22 0 chrX 105417997 105418134 -61232162 + L1M2 LINE L1 2597 2736 -3407 5 1389 23 92 0 0 chrX 105418173 105418238 -61232058 + AT_rich Low_complexity Low_complexity 1 65 0 5 1389 1193 61 0 0 chrX 105419259 105419406 -61230890 + B1_Mm SINE Alu 1 147 0 5 1389 6642 60 30 1 chrX 105419411 105420279 -61230017 - RLTR13B1 LTR ERVK 0 893 1 5 1389 574 288 92 15 chrX 105421122 105421731 -61228565 + L1M4 LINE L1 3275 3930 -2216 5 1389 28398 105 18 14 chrX 105421763 105427137 -61223159 + L1Md_F2 LINE L1 189 5585 -298 5 1389 7000 91 8 6 chrX 105427138 105428130 -61222166 + L1Md_F2 LINE L1 5587 6580 -2 5 1389 256 185 128 9 chrX 105428166 105428275 -61222021 + L1M4 LINE L1 5782 5903 -275 5 1389 3312 132 2 0 chrX 105428284 105428790 -61221506 + Lx2 LINE L1 6488 6994 -3 5 1389 351 0 0 0 chrX 105428832 105428871 -61221425 + (A)n Simple_repeat Simple_repeat 1 39 0 5 1389 2804 289 43 37 chrX 105428884 105429950 -61220346 + Lx7 LINE L1 6141 7213 -483 5 1389 1810 96 15 4 chrX 105429999 105430262 -61220034 - L1_Mus4 LINE L1 -5 6631 6366 5 1389 189 366 77 43 chrX 105430856 105430973 -61219323 - L2b LINE L2 -25 3350 3230 5 1389 26 50 0 0 chrX 105430986 105431026 -61219270 + AT_rich Low_complexity Low_complexity 1 40 0 5 1389 36 77 0 0 chrX 105431093 105431171 -61219125 + AT_rich Low_complexity Low_complexity 1 78 0 5 1389 1149 37 7 0 chrX 105431884 105432020 -61218276 + B1_Mus2 SINE Alu 1 137 -10 5 1389 212 0 36 0 chrX 105432020 105432048 -61218248 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1389 667 373 58 45 chrX 105432690 105433330 -61216966 + L2 LINE L2 2197 2844 -575 5 1389 356 344 30 23 chrX 105433507 105433638 -61216658 + RSINE1 SINE B4 2 133 -32 5 1389 261 0 0 0 chrX 105433652 105433681 -61216615 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1389 665 285 111 23 chrX 105433800 105434357 -61215939 + L1MCa LINE L1 1147 1752 -4756 5 1389 318 274 32 50 chrX 105434369 105434503 -61215793 + L1MCa LINE L1 2309 2439 -3882 5 1389 344 343 0 8 chrX 105434511 105434613 -61215683 + ID4_ SINE ID 5 103 -49 5 1389 351 395 25 4 chrX 105434672 105434949 -61215347 + Lx8 LINE L1 6959 7241 -232 5 1389 4157 164 44 10 chrX 105435474 105436662 -61213634 + L1_Mur2 LINE L1 820 2054 -3823 5 1389 708 12 0 0 chrX 105436662 105436743 -61213553 + (CA)n Simple_repeat Simple_repeat 1 81 0 5 1389 4157 162 47 10 chrX 105436743 105436883 -61213413 + L1_Mur2 LINE L1 2055 2195 -3682 5 1389 3588 88 6 2 chrX 105436883 105437529 -61212767 + L1_Mus4 LINE L1 6128 6636 0 5 1389 6482 145 14 7 chrX 105437533 105437743 -61212553 - L1_Mur2 LINE L1 -932 4945 4731 5 1389 377 39 0 19 chrX 105437743 105437795 -61212501 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 5 1389 6482 145 14 7 chrX 105437795 105438769 -61211527 - L1_Mur2 LINE L1 -1147 4730 3753 5 1389 1546 122 13 0 chrX 105438791 105439020 -61211276 + ORR1A2 LTR MaLR 96 327 0 5 1389 1843 188 6 3 chrX 105439026 105439373 -61210923 - Lx4A LINE L1 -64 6994 6647 5 1389 321 321 53 15 chrX 105439399 105439532 -61210764 - MLT1A0 LTR MaLR -11 354 217 5 1389 412 331 39 0 chrX 105439820 105439947 -61210349 - B1F1 SINE Alu -5 144 13 5 1389 23 0 0 0 chrX 105440119 105440142 -61210154 + AT_rich Low_complexity Low_complexity 1 23 0 5 1389 285 302 134 0 chrX 105440278 105440450 -61209846 + L2a LINE L2 3127 3321 -105 5 1389 265 333 26 26 chrX 105440788 105440905 -61209391 + L2 LINE L2 2631 2747 -672 5 1389 573 259 95 15 chrX 105441694 105441831 -61208465 + B3 SINE B2 47 194 -22 5 1389 1548 70 23 9 chrX 105441834 105442050 -61208246 - L1_Mus1 LINE L1 0 6567 6349 5 1389 23 0 0 0 chrX 105442076 105442099 -61208197 + AT_rich Low_complexity Low_complexity 1 23 0 5 1389 1420 155 18 3 chrX 105442859 105443143 -61207153 - Lx2 LINE L1 -706 6291 6004 5 1389 2316 122 52 0 chrX 105443145 105443579 -61206717 + Lx2 LINE L1 5535 5990 -1007 5 1389 343 236 190 57 chrX 105443615 105443826 -61206470 + L1MA5 LINE L1 3238 3476 -2670 5 1389 6372 47 26 11 chrX 105443866 105444687 -61205609 + L1Md_F3 LINE L1 5738 6570 -14 5 1389 738 53 0 0 chrX 105444699 105444794 -61205502 + (TTTC)n Simple_repeat Simple_repeat 4 98 0 5 1389 1396 92 0 10 chrX 105444799 105445007 -61205289 - L1Md_F2 LINE L1 0 6582 6377 5 1389 391 313 58 31 chrX 105445009 105445233 -61205063 + L1MA5 LINE L1 3930 4159 -1984 5 1389 288 77 0 0 chrX 105445261 105445300 -61204996 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 5 1389 1757 227 19 16 chrX 105445400 105445772 -61204524 - ORR1D1 LTR MaLR -1 373 1 5 1389 1733 268 79 43 chrX 105446341 105446999 -61203297 + Lx8 LINE L1 6789 7470 -3 5 1389 801 301 77 17 chrX 105447005 105447407 -61202889 + L1MA5 LINE L1 4402 4827 -1316 5 1389 847 327 19 19 chrX 105447538 105447809 -61202487 + B4A SINE B4 2 272 -20 5 1389 300 284 49 69 chrX 105447901 105448147 -61202149 + L1MA5 LINE L1 4999 5239 -904 5 1389 320 91 0 0 chrX 105448217 105448286 -61202010 + L1Md_F2 LINE L1 6520 6582 0 5 1389 23 0 0 0 chrX 105448290 105448313 -61201983 + AT_rich Low_complexity Low_complexity 1 23 0 5 1389 1151 304 84 24 chrX 105448330 105449257 -61201039 + L1MA5 LINE L1 5298 6280 -20 5 1389 437 281 43 9 chrX 105449923 105450038 -61200258 + Tigger1 DNA MER2_type 2 120 -2298 5 1389 360 257 50 0 chrX 105450052 105450153 -61200143 + Tigger1 DNA MER2_type 1533 1638 -780 5 1389 270 287 43 77 chrX 105450369 105450486 -61199810 + MT2B2 LTR ERVL 157 269 -315 5 1389 643 228 0 0 chrX 105450390 105450517 -61199779 + ID_B1 SINE B4 98 224 0 5 1389 361 365 0 25 chrX 105450527 105450645 -61199651 + RSINE1 SINE B4 11 125 -40 5 1389 230 312 16 0 chrX 105450986 105451050 -61199246 + ID4 SINE ID 1 65 -18 5 1389 5788 194 46 11 chrX 105451228 105451737 -61198559 + ORR1B2-int LTR MaLR 243 772 -737 5 1389 1082 109 11 22 chrX 105451737 105451915 -61198381 + L1Md_F2 LINE L1 6407 6582 0 5 1389 5788 194 46 11 chrX 105451915 105452629 -61197667 + ORR1B2-int LTR MaLR 773 1509 0 5 1389 917 198 33 11 chrX 105452629 105452813 -61197483 + ORR1B2 LTR MaLR 1 188 -179 5 1389 2198 135 43 0 chrX 105452813 105452933 -61197363 + L1_Mus3 LINE L1 6247 6379 -259 5 1389 279 0 0 0 chrX 105452933 105452964 -61197332 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1389 2198 135 43 0 chrX 105452964 105453213 -61197083 + L1_Mus3 LINE L1 6380 6631 -7 5 1389 12803 181 213 7 chrX 105453215 105456542 -61193754 + L1_Mur1 LINE L1 1673 5684 -202 5 1389 27989 87 7 11 chrX 105456534 105461113 -61189183 - L1Md_A LINE L1 -756 5127 572 5 1389 3525 155 23 16 chrX 105461114 105461731 -61188565 + Lx LINE L1 6033 6653 -1 5 1389 182 118 29 0 chrX 105461731 105461765 -61188531 + (GAA)n Simple_repeat Simple_repeat 1 35 0 5 1389 10991 156 21 8 chrX 105461774 105464911 -61185385 + Lx2B LINE L1 3759 6943 -57 5 1389 589 258 42 37 chrX 105464912 105465101 -61185195 + RLTR25A LTR ERVK 724 913 -190 5 1389 316 211 0 0 chrX 105465274 105465326 -61184970 + ORR1B2 LTR MaLR 316 367 0 5 1389 5059 195 100 34 chrX 105465379 105465745 -61184551 + ORR1B2-int LTR MaLR 2 369 -889 5 1389 2815 59 0 6 chrX 105465745 105466101 -61184195 + L1_Mus1 LINE L1 6214 6567 0 5 1389 5059 195 100 34 chrX 105466101 105466133 -61184163 + ORR1B2-int LTR MaLR 370 386 -872 5 1389 738 0 0 0 chrX 105466133 105466215 -61184081 + (GAA)n Simple_repeat Simple_repeat 2 83 0 5 1389 5059 195 100 34 chrX 105466215 105466994 -61183302 + ORR1B2-int LTR MaLR 387 1258 0 5 1389 670 158 32 14 chrX 105466994 105467133 -61183163 + ORR1B2 LTR MaLR 1 154 -267 5 1389 364 347 139 0 chrX 105467901 105468045 -61182251 + RSINE1 SINE B4 2 165 0 6 1389 221 190 17 0 chrX 105468471 105468529 -61181767 + (TTAA)n Simple_repeat Simple_repeat 2 60 0 6 1389 929 124 0 21 chrX 105468750 105468890 -61181406 + B1_Mus1 SINE Alu 2 138 -10 6 1389 441 0 0 0 chrX 105468891 105468940 -61181356 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1389 1174 124 15 45 chrX 105469874 105470060 -61180236 + MTB_Mm LTR MaLR 1 183 -217 6 1389 2604 40 0 12 chrX 105470060 105470387 -61179909 + L1Md_F3 LINE L1 6248 6570 -14 6 1389 1174 124 15 45 chrX 105470387 105470402 -61179894 + MTB_Mm LTR MaLR 184 196 -204 6 1389 732 147 9 0 chrX 105470402 105470518 -61179778 - L1_Mus1 LINE L1 -707 5176 5060 6 1389 7328 83 15 0 chrX 105470516 105471895 -61178401 + L1_Mus1 LINE L1 5169 6567 0 6 1389 1551 94 13 0 chrX 105471898 105472122 -61178174 + MTB_Mm LTR MaLR 181 407 0 6 1389 722 308 0 48 chrX 105472365 105472573 -61177723 + B3A SINE B2 1 198 0 6 1389 594 139 0 10 chrX 105472633 105472735 -61177561 + Lx2B LINE L1 6885 6985 -15 6 1389 3655 194 100 65 chrX 105472855 105473082 -61177214 - RLTR25B LTR ERVK 0 1028 805 6 1389 369 0 0 0 chrX 105473082 105473123 -61177173 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1389 3655 194 100 65 chrX 105473123 105473886 -61176410 - RLTR25B LTR ERVK -224 804 3 6 1389 353 284 79 39 chrX 105473934 105474213 -61176083 - L1MEg LINE L1 -4547 1537 1248 6 1389 757 279 64 34 chrX 105474328 105474362 -61175934 - B3 SINE B2 -6 210 167 6 1389 441 0 0 0 chrX 105474362 105474411 -61175885 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1389 757 279 64 34 chrX 105474411 105474495 -61175801 - B3 SINE B2 -50 166 89 6 1389 2685 103 141 2 chrX 105474495 105474962 -61175334 - RLTR47_MM LTR ERV1 0 532 1 6 1389 757 279 64 34 chrX 105474962 105475046 -61175250 - B3 SINE B2 -128 88 2 6 1389 201 308 0 0 chrX 105475779 105475831 -61174465 + GA-rich Low_complexity Low_complexity 3 54 0 6 1389 255 281 14 28 chrX 105475881 105476123 -61174173 + A-rich Low_complexity Low_complexity 1 238 0 6 1389 214 293 0 0 chrX 105476464 105476522 -61173774 + (TA)n Simple_repeat Simple_repeat 1 58 0 6 1389 957 283 101 51 chrX 105476727 105477122 -61173174 - Lx9 LINE L1 -297 7347 6933 6 1389 408 242 0 12 chrX 105477396 105477501 -61172795 - MTEb LTR MaLR -275 104 1 6 1389 4506 92 0 3 chrX 105477773 105478403 -61171893 - L1_Mus1 LINE L1 -814 5069 4442 6 1389 7181 101 9 21 chrX 105478401 105479123 -61171173 + L1_Mus1 LINE L1 5074 5797 -86 6 1389 1150 54 0 39 chrX 105479123 105479276 -61171020 + B1_Mus2 SINE Alu 1 147 0 6 1389 7181 83 6 14 chrX 105479276 105480057 -61170239 + L1_Mus1 LINE L1 5798 6567 0 6 1389 492 325 82 37 chrX 105480523 105480791 -61169505 - MER74B LTR ERVL -158 464 185 6 1389 504 218 126 75 chrX 105481373 105481532 -61168764 - MER34A1 LTR ERV1 0 587 421 6 1389 508 337 97 24 chrX 105482182 105482471 -61167825 - Lx8 LINE L1 -34 7439 7130 6 1389 1933 317 46 50 chrX 105482469 105482568 -61167728 - Lx8 LINE L1 -540 6933 6833 6 1389 1620 49 5 0 chrX 105482568 105482773 -61167523 + L1Md_F3 LINE L1 6365 6570 -14 6 1389 1933 317 46 50 chrX 105482773 105483782 -61166514 - Lx8 LINE L1 -641 6832 5830 6 1389 1000 80 43 7 chrX 105483901 105484040 -61166256 + B1_Mus1 SINE Alu 4 147 -1 6 1389 474 49 0 0 chrX 105484122 105484183 -61166113 + (CA)n Simple_repeat Simple_repeat 1 61 0 6 1389 343 367 100 20 chrX 105484183 105484483 -61165813 - Lx8 LINE L1 -264 7209 6886 6 1389 237 65 0 0 chrX 105484569 105484600 -61165696 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1389 477 0 0 0 chrX 105486238 105486291 -61164005 + (A)n Simple_repeat Simple_repeat 1 53 0 6 1389 734 283 78 46 chrX 105487271 105487705 -61162591 + IAP-d-int LTR ERVK 2596 3043 -3499 6 1389 1145 163 38 0 chrX 105488628 105488837 -61161459 + Lx LINE L1 6435 6651 -3 6 1389 4490 171 76 10 chrX 105489238 105490072 -61160224 + Lx6 LINE L1 4894 5775 -105 6 1389 387 0 0 0 chrX 105490072 105490115 -61160181 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1389 4490 228 78 16 chrX 105490115 105490865 -61159431 + Lx6 LINE L1 5776 6798 -662 6 1389 250 274 104 109 chrX 105490866 105490896 -61159400 + Lx6 LINE L1 6556 6585 -473 6 1389 252 0 0 0 chrX 105490896 105490924 -61159372 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 1389 387 0 0 0 chrX 105490925 105490968 -61159328 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1389 2263 234 63 14 chrX 105490968 105491465 -61158831 + Lx6 LINE L1 6586 7455 -5 6 1389 24 0 0 0 chrX 105491646 105491670 -61158626 + AT_rich Low_complexity Low_complexity 1 24 0 6 1389 307 302 153 5 chrX 105491768 105491984 -61158312 + L1MA5 LINE L1 5383 5630 -661 6 1389 269 250 24 12 chrX 105492040 105492125 -61158171 + L1MA5 LINE L1 5838 5923 -377 6 1389 262 271 59 0 chrX 105492147 105492265 -61158031 + L1M4 LINE L1 4712 4836 -1304 6 1389 431 254 8 11 chrX 105492389 105492512 -61157784 + MTEa LTR MaLR 1 126 -253 6 1389 380 223 54 0 chrX 105492509 105492606 -61157690 + MTEa LTR MaLR 275 377 -2 6 1389 323 263 39 19 chrX 105492706 105492861 -61157435 + L1M4 LINE L1 5116 5273 -873 6 1389 252 120 0 0 chrX 105492866 105492916 -61157380 + (A)n Simple_repeat Simple_repeat 1 50 0 6 1389 1381 203 11 14 chrX 105492932 105493212 -61157084 + RLTR40 LTR ERVK 1 279 -538 6 1389 6319 51 0 0 chrX 105493233 105494013 -61156283 + L1Md_F2 LINE L1 4807 5586 -297 6 1389 8028 45 2 4 chrX 105494013 105494997 -61155299 + L1Md_F2 LINE L1 5587 6568 -14 6 1389 1472 203 111 122 chrX 105495012 105495329 -61154967 + RLTR40 LTR ERVK 339 663 -154 6 1389 1542 23 0 0 chrX 105495329 105495504 -61154792 - B2_Mm1a SINE B2 -17 176 2 6 1389 1472 203 111 122 chrX 105495504 105495663 -61154633 + RLTR40 LTR ERVK 664 810 -7 6 1389 1386 288 72 99 chrX 105495669 105496041 -61154255 + L1_Mur3 LINE L1 3337 3710 -2433 6 1389 1338 76 45 0 chrX 105496041 105496263 -61154033 - L1_Mus3 LINE L1 0 6638 6422 6 1389 1827 211 186 76 chrX 105496263 105497020 -61153276 + L1_Mur3 LINE L1 3679 4521 -1359 6 1389 12826 59 2 0 chrX 105497017 105498656 -61151640 - L1Md_F2 LINE L1 -248 5635 3994 6 1389 7273 54 1 19 chrX 105498656 105499600 -61150696 + L1Md_F2 LINE L1 5653 6579 -3 6 1389 1354 218 65 58 chrX 105499600 105500000 -61150296 + L1_Mur3 LINE L1 4508 4910 -970 6 1389 1573 219 70 23 chrX 105500001 105500488 -61149808 + Lx7 LINE L1 4913 5422 -458 1 1389 509 211 16 8 chrX 105500510 105500639 -61149657 + Lx7 LINE L1 5483 5612 -268 1 1389 1728 190 12 30 chrX 105500642 105500978 -61149318 - ORR1B2 LTR MaLR -8 359 30 2 1389 1400 217 45 47 chrX 105501006 105501432 -61148864 + Lx7 LINE L1 5598 6022 -1674 1 1389 1638 213 49 128 chrX 105501597 105501935 -61148361 + RMER19B LTR ERVK 3 294 -608 3 1389 812 244 82 77 chrX 105501935 105502299 -61147997 + RLTR9A LTR ERVK 3 368 0 4 1389 1638 213 49 128 chrX 105502299 105502429 -61147867 + RMER19B LTR ERVK 295 434 -468 3 1389 1036 243 56 19 chrX 105502432 105502700 -61147596 + Lx7 LINE L1 6349 6626 -1070 1 1389 950 104 0 0 chrX 105502698 105502832 -61147464 - L1Md_F2 LINE L1 -235 5648 5515 5 1389 2914 70 53 4 chrX 105502831 105503345 -61146951 + L1Md_F2 LINE L1 5650 6260 -322 5 1389 608 139 32 16 chrX 105503345 105503469 -61146827 + L1Md_F2 LINE L1 6445 6570 -12 5 1389 6276 104 45 15 chrX 105503530 105503562 -61146734 - MERVL-int LTR ERVL -3312 2173 2141 6 1389 3314 49 0 2 chrX 105503562 105503972 -61146324 - L1Md_F2 LINE L1 -2 6580 6172 7 1389 6276 104 45 15 chrX 105503972 105504928 -61145368 - MERVL-int LTR ERVL -3345 2140 1156 6 1389 398 284 0 0 chrX 105504936 105505038 -61145258 + Lx7 LINE L1 6669 6770 -926 1 1389 618 272 66 53 chrX 105505112 105505430 -61144866 + RLTR15 LTR ERVK 1 322 -37 8 1389 26157 71 6 0 chrX 105506388 105510698 -61139598 - L1Md_F2 LINE L1 0 6582 2248 9 1389 5037 55 11 0 chrX 105510730 105511390 -61138906 - L1Md_F3 LINE L1 -20 6564 5898 1 1389 424 19 0 0 chrX 105511372 105511424 -61138872 - L1Md_F2 LINE L1 -3634 2249 2198 9 1389 1283 278 76 52 chrX 105511714 105512345 -61137951 - Lx9 LINE L1 -29 7615 6970 1 173 7006 118 4 46 chrX 105512560 105513686 -61136610 - Lx2 LINE L1 -1 6996 5919 1 1390 1282 190 39 14 chrX 105513690 105513973 -61136323 - RMER1C Other Other -13 1329 1040 1 1390 38 51 0 0 chrX 105513974 105514033 -61136263 + AT_rich Low_complexity Low_complexity 1 59 0 1 1390 6787 110 21 2 chrX 105514040 105515076 -61135220 - Lx LINE L1 -12 6642 5587 1 1390 429 323 37 37 chrX 105515295 105515430 -61134866 + B1F SINE Alu 7 141 -8 1 1390 16403 126 7 17 chrX 105515697 105517251 -61133045 + L1Md_F2 LINE L1 446 1962 -3921 1 1390 189 74 0 0 chrX 105517251 105517278 -61133018 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1390 16403 82 4 2 chrX 105517278 105518969 -61131327 + L1Md_F2 LINE L1 1963 3661 -2222 1 1390 6982 87 7 1 chrX 105518963 105520483 -61129813 + L1Md_F2 LINE L1 5037 6562 -20 1 1390 198 0 0 0 chrX 105520504 105520526 -61129770 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1 1390 3689 103 24 3 chrX 105520672 105521296 -61129000 - L1Md_F2 LINE L1 -1850 2064 1428 2 1390 5327 97 5369 18 chrX 105521296 105522109 -61128187 - L1Md_F2 LINE L1 0 6582 5785 2 1390 5053 91 7 0 chrX 105522106 105522949 -61127347 - L1Md_F2 LINE L1 -2470 1444 598 2 1390 411 73 0 0 chrX 105522961 105523016 -61127280 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1390 988 146 0 0 chrX 105523126 105523284 -61127012 - L1VL4 LINE L1 -6049 253 96 2 1390 1023 46 1 25 chrX 105523285 105523439 -61126857 + B1_Mus2 SINE Alu 3 150 0 2 1390 25 31 0 0 chrX 105523594 105523626 -61126670 + AT_rich Low_complexity Low_complexity 1 32 0 2 1390 1173 317 79 6 chrX 105523636 105524128 -61126168 + Tigger6b DNA MER2_type 11 538 -1059 2 1390 623 311 85 8 chrX 105524130 105524528 -61125768 - L1M3 LINE L1 -827 5313 4885 2 1390 910 19 0 0 chrX 105524527 105524634 -61125662 + L1Md_T LINE L1 5480 5586 -297 2 1390 8499 30 1 0 chrX 105524634 105525627 -61124669 + L1Md_T LINE L1 5587 6580 -2 2 1390 5853 215 45 9 chrX 105525877 105526485 -61123811 - Lx3C LINE L1 -2 6974 6372 2 1390 2599 97 89 31 chrX 105526485 105526934 -61123362 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1390 5853 211 26 5 chrX 105526934 105527772 -61122524 - Lx3C LINE L1 -605 6371 5482 2 1390 232 268 17 26 chrX 105527782 105527897 -61122399 - L1MA4 LINE L1 -133 6167 6054 3 1390 420 185 40 56 chrX 105527957 105528083 -61122213 - L1MA4 LINE L1 -361 5939 5816 3 1390 381 207 246 22 chrX 105528109 105528292 -61122004 - L1MA4 LINE L1 -698 5602 5379 3 1390 237 119 0 0 chrX 105528676 105528718 -61121578 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1390 583 187 33 80 chrX 105528828 105528979 -61121317 + ORR1D1-int LTR MaLR 1227 1370 0 3 1390 1227 216 155 6 chrX 105528981 105529303 -61120993 + ORR1D1 LTR MaLR 3 372 -2 3 1390 216 0 0 0 chrX 105529561 105529585 -61120711 + (TCTA)n Simple_repeat Simple_repeat 1 24 0 3 1390 183 250 0 0 chrX 105529613 105529665 -61120631 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1390 1536 242 20 20 chrX 105530704 105531054 -61119242 + MTD LTR MaLR 62 411 -8 3 1390 529 327 5 32 chrX 105531660 105531878 -61118418 - L3 LINE CR1 -524 3965 3754 3 1390 27 0 0 0 chrX 105532091 105532118 -61118178 + AT_rich Low_complexity Low_complexity 1 27 0 3 1390 565 269 198 12 chrX 105532495 105532743 -61117553 - RMER15 LTR ERVL -2 573 280 3 1390 3038 194 17 15 chrX 105533021 105533681 -61116615 - L1_Mur2 LINE L1 -88 5789 5129 3 1390 561 142 72 40 chrX 105534181 105534227 -61116069 - Lx9 LINE L1 -164 7480 7435 4 1390 282 106 0 0 chrX 105534227 105534274 -61116022 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 4 1390 561 142 72 40 chrX 105534274 105534352 -61115944 - Lx9 LINE L1 -210 7434 7352 4 1390 554 189 8 0 chrX 105534374 105534496 -61115800 + Lx6 LINE L1 7338 7460 0 4 1390 400 202 28 0 chrX 105534495 105534604 -61115692 + Lx9 LINE L1 7527 7638 -6 4 1390 3136 212 83 3 chrX 105535076 105535928 -61114368 + L1Md_F2 LINE L1 67 986 -5738 4 1390 29432 77 4 1 chrX 105535955 105540520 -61109776 + L1Md_F2 LINE L1 1658 6236 -346 4 1390 1559 201 133 22 chrX 105540518 105540977 -61109319 - L1Md_F LINE L1 -5752 767 258 4 1390 981 193 65 118 chrX 105540982 105541121 -61109175 - L1_Mur2 LINE L1 -2067 3810 3650 4 1390 495 0 0 0 chrX 105541121 105541176 -61109120 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 1390 981 193 65 118 chrX 105541176 105541376 -61108920 - L1_Mur2 LINE L1 -2228 3649 3489 4 1390 1499 199 16 14 chrX 105541645 105542071 -61108225 + L1VL4 LINE L1 798 1223 -5761 4 1390 233 121 385 0 chrX 105542067 105542158 -61108138 + L1VL4 LINE L1 3964 4089 -1797 4 1390 437 109 0 0 chrX 105542153 105542217 -61108079 + L1VL4 LINE L1 4239 4302 -1584 4 1390 2745 294 52 74 chrX 105542226 105543576 -61106720 + Lx5 LINE L1 5716 7035 -15 4 1390 1565 324 60 10 chrX 105543600 105544296 -61106000 + Lx8 LINE L1 6385 7115 -358 5 1390 483 278 135 15 chrX 105544309 105544576 -61105720 + Lx8 LINE L1 7173 7471 -2 5 1390 766 223 19 0 chrX 105544576 105544733 -61105563 - ORR1D2 LTR MaLR -1 369 210 5 1390 1293 212 58 0 chrX 105544784 105545076 -61105220 - Lx3C LINE L1 -1 6975 6667 5 1390 456 286 177 18 chrX 105545079 105545463 -61104833 + L1M2 LINE L1 2920 3364 -2779 5 1390 739 232 0 0 chrX 105545775 105545917 -61104379 - B1_Mus2 SINE Alu -5 142 1 5 1390 432 0 0 0 chrX 105546398 105546446 -61103850 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1390 238 340 96 44 chrX 105547268 105547517 -61102779 - Lx8 LINE L1 -75 7398 7137 5 1390 1218 145 20 112 chrX 105547526 105547963 -61102333 - MTB LTR MaLR -59 360 18 5 1390 25 0 0 0 chrX 105548164 105548189 -61102107 + AT_rich Low_complexity Low_complexity 1 25 0 5 1390 4765 143 19 21 chrX 105548497 105548820 -61101476 + L1_Mur2 LINE L1 1744 2058 -3819 5 1390 312 27 0 0 chrX 105548820 105548857 -61101439 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1390 4765 143 19 21 chrX 105548857 105549500 -61100796 + L1_Mur2 LINE L1 2059 2708 -3169 5 1390 14009 96 6 17 chrX 105549493 105551752 -61098544 + L1_Mur1 LINE L1 1593 3825 -2061 6 1390 3772 93 6 3 chrX 105551753 105552495 -61097801 + L1Md_F2 LINE L1 643 1344 -5380 6 1390 10595 59 2 1 chrX 105555342 105556753 -61093543 + L1Md_F2 LINE L1 4174 5586 -297 6 1390 7797 49 16 2 chrX 105556754 105557734 -61092562 + L1Md_F2 LINE L1 5588 6581 -1 6 1390 4508 136 53 9 chrX 105557735 105558609 -61091687 + L1_Mur2 LINE L1 1704 2615 -3262 6 1390 5270 216 45 28 chrX 105558612 105559397 -61090899 + Lx5 LINE L1 5795 6610 -440 6 1390 3722 59 2 14 chrX 105559397 105559879 -61090417 + L1_Mus1 LINE L1 6092 6567 0 6 1390 5270 216 45 28 chrX 105559879 105560328 -61089968 + Lx5 LINE L1 6611 7050 0 6 1390 23 54 0 0 chrX 105560340 105560377 -61089919 + AT_rich Low_complexity Low_complexity 1 37 0 6 1390 695 308 83 26 chrX 105561804 105562048 -61088248 - Lx8 LINE L1 -1259 6437 6185 6 1390 561 55 0 0 chrX 105562048 105562121 -61088175 + (TG)n Simple_repeat Simple_repeat 2 74 0 6 1390 695 272 202 44 chrX 105562121 105562380 -61087916 - Lx8 LINE L1 -1283 6190 5879 6 1390 22 0 0 0 chrX 105563297 105563319 -61086977 + AT_rich Low_complexity Low_complexity 1 22 0 6 1390 213 39 0 0 chrX 105563618 105563644 -61086652 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 1390 1460 75 5 0 chrX 105563851 105564051 -61086245 + ORR1A1-int LTR MaLR 1592 1792 0 7 1390 2688 58 0 12 chrX 105564051 105564342 -61085954 + ORR1A1 LTR MaLR 1 288 -58 7 1390 306 0 0 0 chrX 105564342 105564376 -61085920 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 1390 2688 58 0 12 chrX 105564376 105564430 -61085866 + ORR1A1 LTR MaLR 289 342 -4 7 1390 238 200 56 97 chrX 105564430 105564441 -61085855 + ORR1B1 LTR MaLR 71 82 -312 7 1390 314 260 67 14 chrX 105564623 105564790 -61085506 - L1MA4A LINE L1 -379 5924 5770 7 1390 494 304 22 22 chrX 105564794 105565023 -61085273 - MER63C DNA AcHobo -132 798 570 7 1390 885 284 12 31 chrX 105565025 105565348 -61084948 - Lx8 LINE L1 -168 5679 5363 7 1390 368 289 12 19 chrX 105565354 105565516 -61084780 + Lx8 LINE L1 5676 5836 -11 7 1390 30564 80 5 3 chrX 105565839 105571123 -61079173 + L1Md_F2 LINE L1 199 5589 -297 7 1390 7919 55 3 0 chrX 105571123 105572114 -61078182 + L1Md_F2 LINE L1 5590 6583 -2 7 1390 999 133 0 0 chrX 105572115 105572258 -61078038 + B1_Mus1 SINE Alu 3 145 -3 7 1390 2415 275 68 12 chrX 105572314 105572652 -61077644 + Lx8 LINE L1 6241 6582 -891 7 1390 1476 189 186 19 chrX 105572652 105573013 -61077283 + MTC LTR MaLR 1 421 0 7 1390 2415 275 68 12 chrX 105573013 105573357 -61076939 + Lx8 LINE L1 6583 6965 -508 7 1390 459 0 0 0 chrX 105573357 105573408 -61076888 + (TC)n Simple_repeat Simple_repeat 1 51 0 7 1390 2415 275 68 12 chrX 105573408 105573493 -61076803 + Lx8 LINE L1 6966 7050 -423 7 1390 312 267 294 30 chrX 105573497 105573728 -61076568 - Lx9 LINE L1 -643 7001 6710 8 1390 24 96 0 0 chrX 105574501 105574574 -61075722 + AT_rich Low_complexity Low_complexity 1 73 0 8 1390 897 314 55 21 chrX 105574731 105575467 -61074829 + Lx8 LINE L1 5106 5874 -423 8 1390 261 242 0 43 chrX 105575463 105575532 -61074764 - Lx9 LINE L1 -870 6774 6709 8 1390 592 203 68 0 chrX 105575591 105575709 -61074587 + B2_Mm2 SINE B2 4 129 -66 8 1390 1829 329 123 13 chrX 105575786 105575905 -61074391 + Lx8 LINE L1 6057 6196 -1277 8 1390 854 50 8 0 chrX 105575905 105576025 -61074271 + (TG)n Simple_repeat Simple_repeat 2 122 0 8 1390 1829 318 104 41 chrX 105576025 105577010 -61073286 + Lx8 LINE L1 6197 7389 -255 8 1390 1084 75 7 7 chrX 105577010 105577157 -61073139 + B1_Mm SINE Alu 1 147 0 8 1390 1439 314 97 52 chrX 105577157 105577387 -61072909 + Lx8 LINE L1 7390 7630 -14 8 1390 279 177 0 0 chrX 105578122 105578184 -61072112 + GA-rich Low_complexity Low_complexity 2 63 0 8 1390 392 310 10 0 chrX 105578807 105578907 -61071389 + PB1D10 SINE Alu 8 108 -9 8 1390 189 0 0 0 chrX 105578962 105578983 -61071313 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 1390 5773 200 46 33 chrX 105579460 105580777 -61069519 + Lx5 LINE L1 5715 7047 -3 9 1390 12947 3 0 0 chrX 105580776 105582985 -61067311 - L1Md_A LINE L1 -1 6581 4373 9 1390 22 0 0 0 chrX 105582985 105583007 -61067289 + AT_rich Low_complexity Low_complexity 1 22 0 9 1390 432 207 4 0 chrX 105583089 105583179 -61067117 + B1_Mur1 SINE Alu 50 141 -8 9 1390 315 0 0 0 chrX 105583180 105583215 -61067081 + (CCA)n Simple_repeat Simple_repeat 3 37 0 9 1390 209 139 23 0 chrX 105583215 105583258 -61067038 + (CAA)n Simple_repeat Simple_repeat 2 45 0 9 1390 1594 67 5 0 chrX 105583736 105583944 -61066352 - MTB LTR MaLR -191 209 1 9 1390 2345 144 16 0 chrX 105584006 105584380 -61065916 - RLTR14 LTR ERV1 0 382 3 9 1390 186 133 0 0 chrX 105584898 105584928 -61065368 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 9 1390 332 247 91 20 chrX 105584928 105585027 -61065269 + HAL1b LINE L1 352 457 -1552 9 1390 2242 60 3 3 chrX 105585070 105585355 -61064941 + L1_Mus1 LINE L1 6279 6563 -4 1 1390 742 234 117 19 chrX 105585406 105585611 -61064685 + RMER21B LTR ERV1 348 572 -270 1 1390 207 0 0 0 chrX 105586157 105586180 -61064116 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 1 1390 396 289 96 0 chrX 105586235 105586370 -61063926 - ID_B1 SINE B4 0 224 77 1 1390 217 321 14 29 chrX 105586372 105586457 -61063839 + CT-rich Low_complexity Low_complexity 54 139 0 1 1390 594 246 28 21 chrX 105586457 105586602 -61063694 - B1_Mur1 SINE Alu -1 148 3 1 1390 217 321 14 29 chrX 105586602 105586654 -61063642 + polypyrimidine Low_complexity Low_complexity 4 53 0 1 1390 858 167 0 0 chrX 105587382 105587520 -61062776 + B1_Mus1 SINE Alu 3 140 -8 1 1390 306 284 51 31 chrX 105588014 105588112 -61062184 + MT2B LTR ERVL 161 260 -341 1 1390 455 226 86 0 chrX 105588026 105588119 -61062177 + B1_Mur1 SINE Alu 14 114 -35 1 1390 245 279 12 71 chrX 105588055 105588140 -61062156 + RLTR25A LTR ERVK 525 604 -499 1 1390 275 326 31 8 chrX 105588213 105588343 -61061953 + L1M5 LINE L1 4014 4146 -2000 1 1390 1376 233 42 0 chrX 105589325 105589638 -61060658 + Lx5 LINE L1 6725 7050 0 1 1390 23 54 0 0 chrX 105589650 105589687 -61060609 + AT_rich Low_complexity Low_complexity 1 37 0 1 1390 7702 58 7 10 chrX 105589851 105590843 -61059453 + L1Md_F2 LINE L1 5588 6576 -6 1 1390 249 304 13 0 chrX 105591044 105591123 -61059173 + GA-rich Low_complexity Low_complexity 2 81 0 1 1390 613 258 53 12 chrX 105591153 105591360 -61058936 + L1M2 LINE L1 4606 4876 -1267 1 1390 304 333 0 11 chrX 105591366 105591454 -61058842 + PB1D10 SINE Alu 1 87 -30 1 1390 490 296 42 51 chrX 105592325 105592539 -61057757 - B3 SINE B2 0 216 5 1 1390 240 241 10 147 chrX 105592699 105592801 -61057495 + MT2A LTR ERVL 1 88 -445 1 1390 1003 248 157 22 chrX 105592736 105593067 -61057229 + MTD LTR MaLR 50 406 -13 1 1390 394 193 0 74 chrX 105593273 105593368 -61056928 + RMER5 LTR ERV1 43 130 -404 1 1390 627 259 23 6 chrX 105593371 105593546 -61056750 + RMER5 LTR ERV1 357 534 0 1 1390 207 0 0 0 chrX 105593570 105593593 -61056703 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1390 1357 66 28 0 chrX 105593767 105593948 -61056348 + B2_Mm2 SINE B2 1 186 -9 1 1390 252 149 0 0 chrX 105594247 105594294 -61056002 + (CATA)n Simple_repeat Simple_repeat 2 48 0 1 1390 381 156 0 0 chrX 105594291 105594368 -61055928 + (TG)n Simple_repeat Simple_repeat 1 77 0 1 1390 205 267 0 39 chrX 105594498 105594576 -61055720 + A-rich Low_complexity Low_complexity 6 80 0 1 1390 464 194 53 97 chrX 105594762 105594844 -61055452 + L1M2 LINE L1 5086 5156 -987 1 1390 1130 97 69 0 chrX 105594844 105595019 -61055277 - B2_Mm2 SINE B2 -7 188 2 1 1390 464 194 53 97 chrX 105595019 105595164 -61055132 + L1M2 LINE L1 5157 5303 -840 1 1390 1769 195 0 6 chrX 105595181 105595496 -61054800 - MTC LTR MaLR -2 419 107 1 1390 33247 18 0 0 chrX 105595529 105600349 -61049947 + L1Md_A LINE L1 462 5238 -645 1 1390 325 281 7 49 chrX 105600718 105600860 -61049436 + (GCCTG)n Simple_repeat Simple_repeat 1 136 0 1 1390 486 0 0 0 chrX 105600877 105600931 -61049365 + (CATCT)n Simple_repeat Simple_repeat 2 55 0 1 1390 201 141 62 15 chrX 105601011 105601076 -61049220 + (CCTCG)n Simple_repeat Simple_repeat 4 71 0 1 1390 303 354 26 9 chrX 105603406 105603520 -61046776 + ID_B1 SINE B4 88 203 -21 1 1390 581 334 65 58 chrX 105603793 105604101 -61046195 + MER54A LTR ERVL 6 315 -586 1 1390 367 314 30 77 chrX 105604242 105604411 -61045885 + MER54A LTR ERVL 526 686 -215 1 1390 21 0 0 0 chrX 105605140 105605161 -61045135 + AT_rich Low_complexity Low_complexity 1 21 0 1 1390 4468 142 26 7 chrX 105605178 105605901 -61044395 + RMER19A LTR ERVK 1 737 0 1 1390 5090 153 63 28 chrX 105605901 105606164 -61044132 + MurERV4_19-int LTR ERVK 1 264 -5516 1 1390 1076 29 7 0 chrX 105606164 105606302 -61043994 + L1Md_A LINE L1 6444 6582 0 1 1390 5090 153 63 28 chrX 105606302 105607000 -61043296 + MurERV4_19-int LTR ERVK 265 996 -4784 1 1390 2540 94 3 3 chrX 105607014 105607365 -61042931 - L1_Mus2 LINE L1 -2 6564 6214 1 1390 2331 73 0 0 chrX 105607365 105607679 -61042617 + L1_Mus2 LINE L1 5886 6199 -367 1 1390 481 113 101 20 chrX 105607699 105607798 -61042498 + L1Md_F3 LINE L1 6476 6582 -2 1 1390 5735 165 115 89 chrX 105607980 105608520 -61041776 + MurERV4_19-int LTR ERVK 999 1566 -4214 1 1390 1142 122 32 5 chrX 105608520 105608709 -61041587 + B2_Mm2 SINE B2 2 195 0 1 1390 5735 165 115 89 chrX 105608709 105608728 -61041568 + MurERV4_19-int LTR ERVK 1567 1624 -4156 1 1390 407 230 23 11 chrX 105608719 105608807 -61041489 + B4 SINE B4 81 169 -123 1 1390 607 146 19 46 chrX 105608728 105608827 -61041469 + PB1D9 SINE Alu 5 104 -16 1 1390 786 50 0 0 chrX 105608827 105608926 -61041370 + (GA)n Simple_repeat Simple_repeat 1 99 0 1 1390 5735 165 115 89 chrX 105608934 105609976 -61040320 + MurERV4_19-int LTR ERVK 1625 2753 -3027 1 1390 3343 182 49 6 chrX 105609976 105610681 -61039615 - Lx5 LINE L1 -1382 5668 4932 1 1390 1127 256 148 29 chrX 105610680 105611091 -61039205 - RMER1B Other Other -603 463 4 1 1390 4821 204 35 46 chrX 105611606 105614016 -61036280 - Lx5 LINE L1 0 7058 4640 1 1390 3934 82 82 0 chrX 105614322 105614862 -61035434 + MT2B2 LTR ERVL 1 584 0 1 1390 1345 82 11 0 chrX 105615025 105615207 -61035089 - B2_Mm1t SINE B2 -9 184 1 1 1390 768 298 135 19 chrX 105615576 105616096 -61034200 + HERVL74-int LTR ERVL 1508 2087 -3598 1 1390 1969 146 6 9 chrX 105616301 105616640 -61033656 - ORR1A1 LTR MaLR -8 338 1 1 1390 286 329 35 0 chrX 105616878 105616963 -61033333 + PB1 SINE Alu 1 88 -39 1 1390 186 43 0 0 chrX 105617357 105617380 -61032916 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1390 505 267 0 24 chrX 105617402 105617525 -61032771 + ID_B1 SINE B4 105 224 0 1 1390 1222 343 62 32 chrX 105617997 105618804 -61031492 + HERVL74-int LTR ERVL 2313 3143 -2542 1 1390 837 306 50 23 chrX 105618886 105619107 -61031189 - B4A SINE B4 -6 286 60 1 1390 359 211 276 0 chrX 105619140 105619261 -61031035 + URR1B DNA MER1_type 1 155 -70 1 1390 466 16 16 0 chrX 105619261 105619322 -61030974 + B2_Mm2 SINE B2 1 62 -133 1 1390 3006 122 26 40 chrX 105619304 105619809 -61030487 + MT2B2 LTR ERVL 79 576 -8 1 1390 1124 294 71 29 chrX 105619835 105620501 -61029795 + Lx9 LINE L1 6421 7251 -393 1 1390 302 143 127 51 chrX 105620516 105620634 -61029662 - Lx9 LINE L1 -2 7642 7516 1 1390 180 339 35 78 chrX 105620706 105620847 -61029449 + MIRc SINE MIR 11 145 -123 1 1390 2234 59 0 3 chrX 105621100 105621405 -61028891 + L1_Mus2 LINE L1 5651 5954 -612 1 1390 242 262 12 47 chrX 105621827 105621912 -61028384 - MIRc SINE MIR -96 172 87 1 1390 583 352 26 48 chrX 105622070 105622151 -61028145 + RMER15 LTR ERVL 351 422 -153 1 1390 1383 242 67 30 chrX 105622151 105622552 -61027744 + MTD LTR MaLR 1 416 -3 1 1390 583 352 26 48 chrX 105622552 105622700 -61027596 + RMER15 LTR ERVL 423 575 0 1 1390 363 134 24 12 chrX 105622748 105622831 -61027465 + CT-rich Low_complexity Low_complexity 1 84 0 1 1390 412 312 148 0 chrX 105622832 105622960 -61027336 - B1F SINE Alu 0 149 3 1 1390 961 206 35 28 chrX 105624212 105624466 -61025830 - Lx5 LINE L1 0 7050 6795 1 1390 27 29 0 0 chrX 105624687 105624721 -61025575 + AT_rich Low_complexity Low_complexity 1 34 0 1 1390 812 266 29 0 chrX 105624721 105624894 -61025402 - B3 SINE B2 -34 182 5 1 1390 21978 93 9 6 chrX 105624896 105627951 -61022345 - L1Md_F2 LINE L1 -5 6577 3489 1 1390 702 44 0 0 chrX 105627951 105628041 -61022255 + (TTTC)n Simple_repeat Simple_repeat 2 91 0 1 1390 21978 98 13 8 chrX 105628041 105629093 -61021203 - L1Md_F2 LINE L1 -2395 3488 2458 1 1390 11160 86 5 4 chrX 105629140 105631438 -61018858 - L1Md_F2 LINE L1 -12 6570 4272 1 1390 29423 59 5 102 chrX 105631437 105636687 -61013609 - L1Md_T LINE L1 -1 6581 1983 1 1390 200 35 35 0 chrX 105636687 105636716 -61013580 + (TTTTG)n Simple_repeat Simple_repeat 4 33 0 1 1390 29423 63 7 126 chrX 105636716 105637424 -61012872 - L1Md_T LINE L1 -3901 1982 1250 1 1390 4466 142 68 2 chrX 105637444 105638289 -61012007 - L1Md_F2 LINE L1 -5680 1304 415 1 1390 518 316 34 0 chrX 105638303 105638480 -61011816 - B3A SINE B2 -14 184 2 1 1390 296 346 29 0 chrX 105639328 105639432 -61010864 + PB1D9 SINE Alu 3 109 -11 1 1390 2402 77 0 9 chrX 105640172 105640500 -61009796 + L1Md_F2 LINE L1 6241 6565 -17 1 1390 279 192 0 37 chrX 105641391 105641445 -61008851 - tRNA-Ala-GCY_ tRNA tRNA -5 70 19 1 1390 528 178 0 0 chrX 105642027 105642134 -61008162 + GA-rich Low_complexity Low_complexity 2 108 0 1 1390 188 135 0 26 chrX 105643012 105643050 -61007246 + GA-rich Low_complexity Low_complexity 2 38 0 1 1390 1058 88 0 0 chrX 105643124 105643260 -61007036 + B1_Mus2 SINE Alu 1 136 -11 1 1390 351 0 0 0 chrX 105643260 105643299 -61006997 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1391 23 33 0 0 chrX 105644866 105644896 -61005400 + AT_rich Low_complexity Low_complexity 1 30 0 1 1391 535 351 15 33 chrX 105645102 105645373 -61004923 + Lx8 LINE L1 7035 7300 -173 1 1391 1016 221 139 36 chrX 105645381 105645682 -61004614 - IAPEY3_LTR LTR ERVK 0 332 1 1 1391 1217 209 52 14 chrX 105645682 105646026 -61004270 - IAPEz-int LTR ERVK 0 6481 6125 1 1391 1552 127 57 26 chrX 105646043 105646370 -61003926 - IAPEY3-int LTR ERVK -342 7338 6965 1 1391 1212 138 105 13 chrX 105646370 105646598 -61003698 - IAPEz-int LTR ERVK -1287 5255 5007 1 1391 294 140 0 0 chrX 105646606 105646656 -61003640 - IAPEz-int LTR ERVK -6046 496 447 1 1391 731 182 104 0 chrX 105646898 105647052 -61003244 - IAPEz-int LTR ERVK -4903 503 334 1 1391 778 126 7 7 chrX 105647049 105647185 -61003111 - MMERVK10C-int LTR ERVK -6738 843 708 1 1391 1696 118 113 118 chrX 105647288 105647712 -61002584 - MMERVK10C-int LTR ERVK -7159 422 1 1 1391 1035 225 128 36 chrX 105647712 105648016 -61002280 - IAPEY3_LTR LTR ERVK 0 332 1 1 1391 216 0 0 0 chrX 105648016 105648040 -61002256 + (CAA)n Simple_repeat Simple_repeat 3 26 0 1 1391 339 25 0 0 chrX 105648040 105648080 -61002216 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1391 1646 283 16 22 chrX 105648164 105648652 -61001644 + Lx7 LINE L1 6502 6986 -710 1 1391 203 188 0 99 chrX 105648692 105648763 -61001533 + T-rich Low_complexity Low_complexity 2 65 0 1 1391 36 23 0 0 chrX 105648883 105648926 -61001370 + AT_rich Low_complexity Low_complexity 1 43 0 1 1391 1913 190 31 38 chrX 105649027 105649448 -61000848 + MTC LTR MaLR 1 418 -3 1 1391 2170 194 32 7 chrX 105649710 105650116 -61000180 + MTC LTR MaLR 1 416 -5 1 1391 7347 75 14 1 chrX 105650358 105651685 -60998611 - L1_Mus3 LINE L1 -3 6635 5292 1 1391 848 73 0 0 chrX 105651691 105651814 -60998482 - L1Md_F2 LINE L1 -10 6572 6450 1 1391 2446 49 0 0 chrX 105651814 105652119 -60998177 + L1Md_F2 LINE L1 6171 6475 -107 1 1391 29 0 0 0 chrX 105652209 105652238 -60998058 + AT_rich Low_complexity Low_complexity 1 29 0 1 1391 1955 55 23 4 chrX 105652566 105652822 -60997474 + L1Md_A LINE L1 6320 6580 -2 2 1391 353 292 142 73 chrX 105653063 105653595 -60996701 + L1M4b LINE L1 1279 1635 -5699 2 1391 304 252 17 75 chrX 105653596 105653716 -60996580 - MLT1A1 LTR MaLR 0 408 296 2 1391 228 206 71 53 chrX 105653769 105653882 -60996414 + L1M4b LINE L1 2958 3072 -4262 2 1391 567 324 112 45 chrX 105653940 105654114 -60996182 + L1M4b LINE L1 2987 3161 -3845 2 1391 1147 70 0 0 chrX 105654114 105654257 -60996039 + B1_Mus1 SINE Alu 1 143 -5 2 1391 567 324 112 45 chrX 105654257 105654497 -60995799 + L1M4b LINE L1 3162 3419 -3587 2 1391 378 0 0 0 chrX 105654497 105654539 -60995757 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 1391 567 324 112 45 chrX 105654539 105654767 -60995529 + L1M4b LINE L1 3420 3672 -3334 2 1391 3838 50 12 2 chrX 105655253 105655733 -60994563 + L1Md_F2 LINE L1 6097 6581 -1 2 1391 20861 97 9 2 chrX 105656714 105660750 -60989546 - L1VL1 LINE L1 -1414 4469 406 2 1391 2777 116 34 36 chrX 105660744 105660829 -60989467 - L1_Mur1 LINE L1 -467 5419 5341 2 1391 1085 93 0 0 chrX 105660829 105660980 -60989316 + L1_Mus2 LINE L1 6415 6565 -1 2 1391 2777 116 34 36 chrX 105660980 105661393 -60988903 - L1_Mur1 LINE L1 -546 5340 4922 2 1391 16639 137 33 14 chrX 105661393 105665216 -60985080 - L1_Mur1 LINE L1 -1727 4159 3 2 1391 232 81 0 51 chrX 105666013 105666052 -60984244 + U2 snRNA snRNA 3 39 -149 2 1391 3896 70 0 4 chrX 105667217 105667720 -60982576 + L1Md_F2 LINE L1 6070 6570 -12 2 1391 261 280 101 43 chrX 105668009 105668147 -60982149 + Charlie26a DNA MER1_type 20 165 -160 2 1391 3859 126 34 33 chrX 105668449 105669090 -60981206 + Lx2B LINE L1 6355 6996 -4 2 1391 621 344 62 23 chrX 105669091 105669562 -60980734 + L1MD1 LINE L1 5490 5978 -264 2 1391 249 333 22 22 chrX 105670124 105670213 -60980083 - RSINE1 SINE B4 -22 143 55 2 1391 349 222 79 89 chrX 105670306 105670412 -60979884 + L1MD2 LINE L1 6158 6250 -109 2 1391 462 79 0 0 chrX 105670412 105670475 -60979821 + (CA)n Simple_repeat Simple_repeat 1 63 0 2 1391 349 222 79 89 chrX 105670475 105670571 -60979725 + L1MD2 LINE L1 6251 6358 -1 2 1391 239 348 29 0 chrX 105670596 105670665 -60979631 + ID SINE ID 3 73 -151 2 1391 1864 58 0 0 chrX 105670729 105670969 -60979327 - L1Md_A LINE L1 0 6582 6343 2 1391 1911 139 0 41 chrX 105671269 105671613 -60978683 + Lx2 LINE L1 6666 6995 -2 2 1391 204 40 0 0 chrX 105672040 105672065 -60978231 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 2 1391 411 71 0 0 chrX 105672719 105672775 -60977521 - L1_Mm LINE L1 -1534 4349 4294 2 1391 705 69 17 25 chrX 105672776 105672895 -60977401 + L1Md_F2 LINE L1 6462 6579 -3 2 1391 412 335 84 14 chrX 105672950 105673185 -60977111 + Lx9 LINE L1 6427 6807 -837 2 1391 426 338 19 0 chrX 105673187 105673344 -60976952 + Lx9 LINE L1 7253 7412 -232 2 1391 497 280 7 71 chrX 105673591 105673745 -60976551 + B4A SINE B4 64 207 -85 2 1391 815 174 156 0 chrX 105674181 105674393 -60975903 - Lx9 LINE L1 -1 7643 7399 2 1391 4182 77 9 4 chrX 105674853 105675411 -60974885 - L1_Mus2 LINE L1 -1 6565 6005 2 1391 272 0 79 0 chrX 105675638 105675676 -60974620 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 2 1391 29 60 0 0 chrX 105675844 105675894 -60974402 + AT_rich Low_complexity Low_complexity 1 50 0 2 1391 440 315 94 64 chrX 105675894 105676192 -60974104 - Lx8 LINE L1 -4 7469 7163 2 1391 2462 159 28 19 chrX 105677848 105678272 -60972024 - Lx4A LINE L1 -11 7047 6620 2 1391 252 0 0 0 chrX 105678409 105678437 -60971859 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 2 1391 472 348 25 49 chrX 105678437 105678600 -60971696 - RSINE1 SINE B4 -1 164 6 2 1391 1069 245 58 0 chrX 105682544 105682801 -60967495 - Lx5 LINE L1 0 7050 6779 2 1391 1367 261 66 21 chrX 105682826 105683205 -60967091 - Lx8 LINE L1 -137 7336 6941 2 1391 858 265 27 51 chrX 105683208 105683502 -60966794 - Lx8 LINE L1 -651 6822 6536 2 1391 242 259 0 0 chrX 105683528 105683586 -60966710 - L1M2 LINE L1 -2236 3904 3847 2 1391 725 258 187 7 chrX 105683724 105684302 -60965994 - L1M2 LINE L1 -2456 3687 3006 2 1391 25 65 0 0 chrX 105684407 105684453 -60965843 + AT_rich Low_complexity Low_complexity 1 46 0 2 1391 746 241 63 0 chrX 105684546 105684720 -60965576 + Lx8 LINE L1 7135 7319 -154 2 1391 357 82 0 0 chrX 105684720 105684769 -60965527 + (CATA)n Simple_repeat Simple_repeat 3 51 0 2 1391 321 100 0 0 chrX 105684769 105684818 -60965478 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1391 1102 173 82 0 chrX 105684941 105685149 -60965147 + URR1B DNA MER1_type 1 225 0 2 1391 218 264 228 11 chrX 105685185 105685277 -60965019 - L2 LINE L2 -1321 2098 1987 2 1391 365 184 57 114 chrX 105685320 105685443 -60964853 - MTC-int LTR MaLR -232 1026 911 2 1391 366 281 112 40 chrX 105685619 105685771 -60964525 + Lx8 LINE L1 7058 7220 -253 2 1391 279 239 14 43 chrX 105685764 105685834 -60964462 + Lx8 LINE L1 7156 7223 -250 2 1391 243 314 32 75 chrX 105685989 105686082 -60964214 + Lx8 LINE L1 7156 7244 -229 2 1391 195 162 0 0 chrX 105686205 105686242 -60964054 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 1391 782 320 62 35 chrX 105686431 105686795 -60963501 - L1M3 LINE L1 -412 5768 5412 2 1391 2639 37 6 0 chrX 105686795 105687118 -60963178 - L1Md_F3 LINE L1 -2 6582 6258 2 1391 782 301 55 9 chrX 105687118 105687278 -60963018 - L1M3 LINE L1 -769 5411 5217 2 1391 8432 180 8 14 chrX 105687462 105690263 -60960033 - Lx2 LINE L1 0 6997 4211 2 1391 8572 66 13 1 chrX 105690271 105690881 -60959415 - L1_Mm LINE L1 -24 5859 5249 2 1391 321 26 0 0 chrX 105690881 105690919 -60959377 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 1391 8572 66 13 1 chrX 105690919 105691423 -60958873 - L1_Mm LINE L1 -635 5248 4733 2 1391 41128 5 0 0 chrX 105691418 105697786 -60952510 - L1Md_A LINE L1 0 6582 214 2 1391 229 149 85 0 chrX 105697787 105697834 -60952462 - L1_Mm LINE L1 -1142 4741 4691 2 1391 387 295 48 48 chrX 105698214 105698360 -60951936 - RSINE1 SINE B4 -17 148 3 2 1391 186 156 0 0 chrX 105698488 105698533 -60951763 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 2 1391 24 0 0 0 chrX 105698537 105698561 -60951735 + AT_rich Low_complexity Low_complexity 1 24 0 2 1391 387 335 72 10 chrX 105698567 105698760 -60951536 - Lx7 LINE L1 -208 7436 7232 2 1391 769 249 11 5 chrX 105698764 105698947 -60951349 - ORR1D1 LTR MaLR 0 394 211 2 1391 312 312 37 105 chrX 105698856 105699046 -60951250 + ORR1D1 LTR MaLR 83 259 -115 2 1391 730 286 56 34 chrX 105699320 105699677 -60950619 - Lx7 LINE L1 -1669 5975 5608 2 1391 529 313 87 18 chrX 105699791 105700295 -60950001 - L1_Rod LINE L1 -3839 2008 1470 2 1391 233 70 0 0 chrX 105700454 105700497 -60949799 - L1Md_T LINE L1 -2 6580 6538 2 1391 283 318 93 86 chrX 105701049 105701211 -60949085 - RSINE1 SINE B4 0 165 3 2 1391 245 267 78 0 chrX 105701274 105701390 -60948906 + L1M4b LINE L1 75 199 -7135 2 1391 277 319 47 0 chrX 105701678 105701847 -60948449 + L1M4b LINE L1 3262 3438 -3568 2 1391 504 312 175 8 chrX 105701883 105702255 -60948041 + L1M4b LINE L1 3513 3946 -3060 2 1391 6249 98 18 29 chrX 105702257 105703664 -60946632 - L1VL2 LINE L1 -2159 1456 65 2 1391 622 294 110 50 chrX 105703743 105704362 -60945934 + L1M4b LINE L1 4463 5118 -1888 2 1391 23 54 0 0 chrX 105704382 105704419 -60945877 + AT_rich Low_complexity Low_complexity 1 37 0 2 1391 810 256 73 23 chrX 105704420 105704640 -60945656 - Lx5 LINE L1 -2 7048 6818 2 1391 587 266 37 19 chrX 105704769 105704930 -60945366 - ORR1D2-int LTR MaLR -666 704 541 2 1391 233 89 26 130 chrX 105704930 105705007 -60945289 + T-rich Low_complexity Low_complexity 2 70 0 2 1391 5393 72 0 0 chrX 105705050 105705742 -60944554 - L1_Mus1 LINE L1 0 6567 5876 2 1391 1314 296 52 22 chrX 105705793 105706239 -60944057 - ORR1D2-int LTR MaLR -852 518 60 2 1391 228 35 0 0 chrX 105706239 105706268 -60944028 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 2 1391 1187 260 58 21 chrX 105706307 105706598 -60943698 - ORR1D2 LTR MaLR -3 367 66 2 1391 2187 75 32 3 chrX 105706624 105706932 -60943364 - IAPLTR2b LTR ERVK -10 317 1 2 1391 12500 119 18 18 chrX 105706932 105708986 -60941310 - L1VL1 LINE L1 -621 3077 1023 2 1391 2378 51 19 12 chrX 105708986 105709305 -60940991 - L1Md_F3 LINE L1 0 6584 6264 2 1391 12500 109 18 30 chrX 105709305 105710107 -60940189 - L1VL1 LINE L1 -5400 1022 217 2 1391 3016 146 11 65 chrX 105710109 105710763 -60939533 + RLTR21 LTR ERVK 487 1198 -206 2 1391 234 0 0 0 chrX 105710763 105710789 -60939507 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1391 281 349 67 67 chrX 105710789 105710986 -60939310 + RLTR21 LTR ERVK 1199 1403 -1 2 1391 703 214 116 11 chrX 105710986 105711176 -60939120 + ORR1E-int LTR MaLR 1168 1354 -16 2 1391 715 296 40 77 chrX 105711162 105711462 -60938834 + ORR1E LTR MaLR 28 316 -43 2 1391 1100 294 116 5 chrX 105711554 105711985 -60938311 - Lx8 LINE L1 -2 7471 6993 2 1391 351 0 0 0 chrX 105712709 105712748 -60937548 + (TTAA)n Simple_repeat Simple_repeat 3 41 0 2 1391 1111 219 16 24 chrX 105712752 105713005 -60937291 - Lx5 LINE L1 -22 7028 6778 2 1391 25 0 0 0 chrX 105713010 105713035 -60937261 + AT_rich Low_complexity Low_complexity 1 25 0 2 1391 3507 63 2 5 chrX 105713101 105713548 -60936748 - L1_Mus1 LINE L1 -340 6227 5782 2 1391 2192 91 32 0 chrX 105713548 105713856 -60936440 + L1_Mus1 LINE L1 6249 6566 -1 2 1391 199 29 0 79 chrX 105713882 105713920 -60936376 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 2 1391 600 266 0 20 chrX 105714039 105714185 -60936111 - B1_Mur1 SINE Alu -6 143 1 2 1391 759 22 0 0 chrX 105714374 105714463 -60935833 + (GA)n Simple_repeat Simple_repeat 2 90 0 2 1391 401 0 20 0 chrX 105715586 105715635 -60934661 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 2 1391 3083 85 35 0 chrX 105715650 105716073 -60934223 + L1_Mus1 LINE L1 6130 6567 0 2 1391 24 77 0 0 chrX 105716187 105716239 -60934057 + AT_rich Low_complexity Low_complexity 1 52 0 2 1391 4296 106 46 61 chrX 105716303 105717124 -60933172 + RMER17D2 LTR ERVK 1 809 0 2 1391 1784 165 22 16 chrX 105717507 105717828 -60932468 + Lx3B LINE L1 6639 6961 -12 2 1391 180 0 0 0 chrX 105717849 105717869 -60932427 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2 1391 297 109 0 0 chrX 105718014 105718069 -60932227 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 2 1391 358 308 85 43 chrX 105718193 105718504 -60931792 - L1M3d LINE L1 -4606 1285 950 2 1391 198 0 0 0 chrX 105718504 105718526 -60931770 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 1391 468 0 0 0 chrX 105718526 105718577 -60931719 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 1391 358 308 85 43 chrX 105718577 105718653 -60931643 - L1M3d LINE L1 -4942 949 878 2 1391 4115 130 176 13 chrX 105718653 105719477 -60930819 - RMER17B LTR ERVK 0 958 1 2 1391 358 308 85 43 chrX 105719477 105719532 -60930764 - L1M3d LINE L1 -5014 877 823 2 1391 1806 264 61 51 chrX 105719784 105720429 -60929867 + L1_Rod LINE L1 3798 4454 -1393 2 1391 2787 90 21 0 chrX 105720429 105721000 -60929296 + L1_Mus3 LINE L1 6233 6638 0 2 1391 1806 264 61 51 chrX 105721000 105721173 -60929123 + L1_Rod LINE L1 4455 4624 -1223 2 1391 7147 105 29 6 chrX 105721192 105723022 -60927274 - L1VL2 LINE L1 -3750 2396 490 2 1391 701 154 69 0 chrX 105723092 105723222 -60927074 - MT2C_Mm LTR ERVL -77 398 260 2 1391 438 287 119 31 chrX 105723519 105723713 -60926583 - L1M3d LINE L1 -5678 213 3 2 1391 392 314 23 40 chrX 105723923 105724099 -60926197 + Lx7 LINE L1 7140 7312 -384 3 1391 3350 38 3 0 chrX 105724223 105724614 -60925682 + MTA_Mm LTR MaLR 1 392 -4 3 1391 22 35 0 0 chrX 105724650 105724679 -60925617 + AT_rich Low_complexity Low_complexity 1 29 0 3 1391 561 306 54 88 chrX 105724904 105725255 -60925041 + L1M4 LINE L1 369 707 -5835 3 1391 409 211 10 50 chrX 105725410 105725510 -60924786 - MTE2a LTR MaLR -3 376 281 3 1391 293 204 0 0 chrX 105725504 105725558 -60924738 - ORR1C2 LTR MaLR -4 374 321 3 1391 7514 83 5 0 chrX 105725558 105726939 -60923357 - L1_Mus1 LINE L1 -4 6563 5178 3 1391 1766 170 41 27 chrX 105726939 105727277 -60923019 - ORR1C2 LTR MaLR -41 343 1 3 1391 914 322 10 40 chrX 105727277 105727575 -60922721 - MTE2b LTR MaLR -90 289 1 3 1391 297 217 188 0 chrX 105727684 105727753 -60922543 - B3 SINE B2 -33 183 102 3 1391 180 0 0 0 chrX 105728089 105728109 -60922187 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1391 265 295 30 59 chrX 105728196 105728297 -60921999 - Lx8 LINE L1 -1165 6308 6211 3 1391 1205 213 99 15 chrX 105728342 105728685 -60921611 - ORR1D1 LTR MaLR 0 374 3 3 1391 9659 94 18 7 chrX 105728841 105729930 -60920366 - Lx3_Mus LINE L1 0 7009 5908 3 1391 216 67 0 0 chrX 105729930 105729960 -60920336 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 3 1391 9659 81 8 10 chrX 105729960 105730500 -60919796 - Lx3_Mus LINE L1 -1102 5907 5371 3 1391 1500 144 4 11 chrX 105730500 105730760 -60919536 + Lx LINE L1 6391 6648 -6 3 1391 1389 276 54 94 chrX 105730996 105731270 -60919026 + L1MB7 LINE L1 5366 5646 -538 3 1391 1081 215 9 5 chrX 105731270 105731485 -60918811 - B3 SINE B2 0 216 1 3 1391 1389 276 54 94 chrX 105731485 105732063 -60918233 + L1MB7 LINE L1 5647 6184 0 3 1391 236 53 0 26 chrX 105732298 105732337 -60917959 + (CAAAAA)n Simple_repeat Simple_repeat 4 41 0 3 1391 360 0 0 0 chrX 105732884 105732924 -60917372 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1391 232 320 26 0 chrX 105732930 105733008 -60917288 - Lx7 LINE L1 -377 7319 7240 3 1391 207 69 0 0 chrX 105733146 105733175 -60917121 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1391 241 208 0 36 chrX 105733222 105733277 -60917019 + GA-rich Low_complexity Low_complexity 4 56 0 3 1391 294 174 283 0 chrX 105733332 105733424 -60916872 + Lx4B LINE L1 6931 7048 -10 3 1391 218 32 0 31 chrX 105733773 105733805 -60916491 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1391 673 182 103 0 chrX 105733993 105734119 -60916177 + B1_Mus1 SINE Alu 10 148 0 3 1391 215 103 26 0 chrX 105734119 105734158 -60916138 + (TAA)n Simple_repeat Simple_repeat 1 40 0 3 1391 1637 313 74 17 chrX 105734522 105735659 -60914637 - L1MA6 LINE L1 -371 5929 4606 3 1391 392 252 46 9 chrX 105735688 105735796 -60914500 - Lx8 LINE L1 -656 6817 6706 3 1391 416 293 88 21 chrX 105735794 105735986 -60914310 - L1_Mur3 LINE L1 -1985 3895 3691 3 1391 508 230 88 0 chrX 105735988 105736101 -60914195 + B3 SINE B2 2 124 -92 3 1391 240 188 0 0 chrX 105736207 105736255 -60914041 - L1MA6 LINE L1 -2409 3734 3687 3 1391 335 250 0 43 chrX 105736255 105736372 -60913924 - L1_Mur2 LINE L1 -2287 3590 3479 3 1391 23 0 0 0 chrX 105736412 105736435 -60913861 + AT_rich Low_complexity Low_complexity 1 23 0 3 1391 256 266 64 13 chrX 105736438 105736603 -60913693 - L1_Mur2 LINE L1 -2562 3315 3142 3 1391 201 39 0 0 chrX 105737565 105737591 -60912705 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 3 1391 352 254 95 0 chrX 105737591 105737717 -60912579 + Lx7 LINE L1 7559 7696 0 3 1391 2097 253 108 54 chrX 105737933 105738376 -60911920 - Lx6 LINE L1 -27 7433 7018 3 1391 314 23 23 0 chrX 105738376 105738419 -60911877 + (TTG)n Simple_repeat Simple_repeat 2 45 0 3 1391 2097 253 108 54 chrX 105738419 105738640 -60911656 - Lx6 LINE L1 -443 7017 6733 3 1391 1148 139 113 10 chrX 105739054 105739258 -60911038 + URR1B DNA MER1_type 1 225 0 3 1391 6741 104 2 1 chrX 105739834 105740766 -60909530 - L1_Mus3 LINE L1 -6 6632 5700 3 1391 574 68 0 0 chrX 105740764 105740838 -60909458 + L1_Mus3 LINE L1 5620 5693 -943 3 1391 914 273 70 26 chrX 105741277 105741694 -60908602 + L1_Rod LINE L1 5396 5830 -17 3 1391 614 310 18 49 chrX 105742011 105742159 -60908137 + RSINE1 SINE B4 8 153 -12 3 1391 1466 194 80 21 chrX 105742159 105742548 -60907748 + RLTR9F LTR ERVK 1 412 -3 3 1391 614 310 18 49 chrX 105742548 105742562 -60907734 + RSINE1 SINE B4 154 165 0 3 1391 306 0 0 0 chrX 105742571 105742605 -60907691 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 3 1391 210 264 19 0 chrX 105742729 105742782 -60907514 + (CATA)n Simple_repeat Simple_repeat 2 55 0 3 1391 295 162 223 62 chrX 105742856 105742968 -60907328 - Lx4B LINE L1 0 7058 6929 3 1391 791 141 166 102 chrX 105743028 105743233 -60907063 + URR1A DNA MER1_type 3 220 -6 3 1391 26 30 0 0 chrX 105744206 105744239 -60906057 + AT_rich Low_complexity Low_complexity 1 33 0 3 1391 222 292 43 53 chrX 105744832 105744926 -60905370 - L4 LINE RTE -189 1840 1748 3 1391 21 36 0 0 chrX 105745191 105745219 -60905077 + AT_rich Low_complexity Low_complexity 1 28 0 3 1391 288 77 0 0 chrX 105745466 105745505 -60904791 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1391 265 317 151 50 chrX 105745511 105745730 -60904566 - MIR SINE MIR -19 243 3 3 1391 25 0 0 0 chrX 105745730 105745755 -60904541 + AT_rich Low_complexity Low_complexity 1 25 0 3 1391 687 314 99 17 chrX 105745915 105746268 -60904028 + Lx8 LINE L1 7060 7441 -32 3 1391 471 256 19 24 chrX 105746280 105746477 -60903819 - L1_Rod LINE L1 -819 5324 5072 3 1391 534 285 36 42 chrX 105746477 105746708 -60903588 + MTE2b LTR MaLR 69 318 -61 3 1391 232 388 77 8 chrX 105747002 105747132 -60903164 + MIR3 SINE MIR 8 146 -62 3 1391 210 316 0 0 chrX 105747273 105747330 -60902966 + MIRc SINE MIR 70 126 -142 3 1391 1458 49 19 10 chrX 105747331 105747536 -60902760 + L1Md_F3 LINE L1 6376 6582 -2 3 1391 4683 113 41 0 chrX 105747550 105748250 -60902046 + L1Md_F2 LINE L1 366 1094 -5522 3 1391 19132 90 7 32 chrX 105748257 105751985 -60898311 + L1Md_F2 LINE L1 2964 6582 0 3 1391 468 0 0 0 chrX 105752507 105752559 -60897737 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1391 279 277 46 86 chrX 105752666 105752840 -60897456 + L1M3c LINE L1 830 996 -5145 3 1391 1167 54 0 0 chrX 105752879 105753026 -60897270 + B1_Mus1 SINE Alu 2 148 0 3 1391 315 0 0 0 chrX 105753050 105753085 -60897211 + (TAA)n Simple_repeat Simple_repeat 2 36 0 3 1391 684 211 30 0 chrX 105753101 105753234 -60897062 + B1_Mur3 SINE Alu 8 144 -5 3 1391 192 97 0 0 chrX 105753283 105753314 -60896982 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1391 879 284 48 8 chrX 105753409 105753782 -60896514 + L1MA9 LINE L1 5776 6163 -149 3 1391 455 299 69 7 chrX 105754098 105754243 -60896053 + RSINE1 SINE B4 1 154 -11 3 1391 1139 104 6 0 chrX 105754256 105754429 -60895867 + (TC)n Simple_repeat Simple_repeat 1 174 0 3 1391 312 27 0 0 chrX 105754429 105754465 -60895831 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1391 894 262 105 4 chrX 105754506 105754782 -60895514 - MER2 DNA MER2_type -3 342 39 3 1391 378 94 0 0 chrX 105755266 105755330 -60894966 + (A)n Simple_repeat Simple_repeat 1 64 0 3 1391 947 250 0 14 chrX 105755514 105755729 -60894567 + B3 SINE B2 2 213 -3 3 1391 1805 187 144 79 chrX 105755891 105756536 -60893760 - RMER6C LTR ERVK 0 690 4 3 1391 1920 52 0 4 chrX 105756536 105756785 -60893511 + L1Md_F2 LINE L1 6335 6582 0 3 1391 557 295 57 13 chrX 105757122 105757349 -60892947 - L1MC1 LINE L1 -49 6284 6048 3 1391 21 0 0 0 chrX 105757376 105757397 -60892899 + AT_rich Low_complexity Low_complexity 1 21 0 3 1391 21 36 0 0 chrX 105758619 105758647 -60891649 + AT_rich Low_complexity Low_complexity 1 28 0 3 1391 2202 175 98 4 chrX 105759376 105759858 -60890438 + RLTR11A2 LTR ERVK 1 527 0 3 1391 330 160 93 0 chrX 105759883 105759958 -60890338 + Lx5 LINE L1 6966 7047 -3 3 1391 4267 95 3 3 chrX 105760410 105761014 -60889282 + L1_Mus4 LINE L1 6033 6636 0 3 1391 441 0 0 0 chrX 105761094 105761143 -60889153 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 3 1391 36705 29 1 8 chrX 105762160 105767349 -60882947 + L1Md_T LINE L1 440 5582 -301 3 1391 8482 29 1 0 chrX 105767353 105768348 -60881948 + L1Md_T LINE L1 5587 6582 0 3 1391 709 263 69 127 chrX 105768366 105768815 -60881481 - RLTR23 LTR ERV1 0 430 8 3 1391 2530 229 63 12 chrX 105768837 105769425 -60880871 + Lx7 LINE L1 6788 7405 -291 3 1391 405 0 0 0 chrX 105769434 105769479 -60880817 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1391 358 220 14 64 chrX 105769500 105769641 -60880655 + Lx7 LINE L1 7559 7692 -4 3 1391 22 0 0 0 chrX 105770360 105770382 -60879914 + AT_rich Low_complexity Low_complexity 1 22 0 3 1391 457 189 41 21 chrX 105772490 105772587 -60877709 - PB1D7 SINE Alu -1 119 21 3 1391 206 118 0 0 chrX 105772600 105772634 -60877662 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1391 363 44 0 0 chrX 105772735 105772780 -60877516 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1391 449 231 18 44 chrX 105772932 105773045 -60877251 - B3 SINE B2 -3 213 104 3 1391 695 276 7 39 chrX 105773122 105773361 -60876935 + MLT1A1 LTR MaLR 164 408 0 3 1391 7927 55 6 1 chrX 105773367 105774485 -60875811 - L1Md_F2 LINE L1 -2 6580 5457 3 1391 25 0 0 0 chrX 105774485 105774510 -60875786 + AT_rich Low_complexity Low_complexity 1 25 0 3 1391 394 274 143 4 chrX 105774564 105774795 -60875501 - L1MC LINE L1 -756 5577 5315 3 173 672 136 0 0 chrX 105775004 105775129 -60875167 + (GA)n Simple_repeat Simple_repeat 1 125 0 3 1392 423 0 0 0 chrX 105775228 105775275 -60875021 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1392 475 295 86 8 chrX 105775275 105775629 -60874667 - L1_Rod LINE L1 -429 5760 5309 3 1392 277 216 0 0 chrX 105775622 105775673 -60874623 - Lx8 LINE L1 -262 7211 7161 3 1392 907 124 10 20 chrX 105775953 105776115 -60874181 - Lx3_Mus LINE L1 -629 6380 6193 3 1392 39089 28 0 7 chrX 105776295 105782286 -60868010 - L1Md_T LINE L1 0 6582 643 3 1392 1834 96 11 4 chrX 105782304 105782577 -60867719 - L1_Mus3 LINE L1 0 6638 6364 3 1392 2362 238 111 10 chrX 105782580 105782973 -60867323 - Lx7 LINE L1 -912 6784 6360 4 1392 2858 80 23 3 chrX 105782973 105783361 -60866935 - MTA_Mm LTR MaLR 0 396 1 4 1392 2362 238 111 10 chrX 105783361 105783526 -60866770 - Lx7 LINE L1 -1337 6359 6189 4 1392 390 42 0 0 chrX 105783526 105783574 -60866722 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1392 2362 238 111 10 chrX 105783574 105783617 -60866679 - Lx7 LINE L1 -1508 6188 6122 4 1392 530 273 154 18 chrX 105784088 105784308 -60865988 + B4A SINE B4 41 290 -2 4 1392 456 51 0 0 chrX 105784338 105784397 -60865899 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1392 357 305 89 24 chrX 105784508 105784676 -60865620 - L1M4 LINE L1 -2366 3780 3602 4 1392 231 261 32 64 chrX 105785011 105785105 -60865191 - L1M4 LINE L1 -2545 3601 3511 4 1392 465 275 42 44 chrX 105785110 105785298 -60864998 - MTD LTR MaLR -1 420 223 4 1392 7982 100 5 4 chrX 105785564 105787422 -60862874 - L1_Mus3 LINE L1 0 6638 4781 4 1392 3379 48 5 0 chrX 105787434 105787853 -60862443 - L1Md_F2 LINE L1 -1 6581 6161 4 1392 8031 68 122 1 chrX 105787845 105789202 -60861094 - L1Md_F2 LINE L1 -548 6034 4459 4 1392 219 150 24 24 chrX 105789206 105789247 -60861049 + B2_Mm2 SINE B2 5 45 -150 4 1392 21 0 0 0 chrX 105789319 105789340 -60860956 + AT_rich Low_complexity Low_complexity 1 21 0 4 1392 8785 107 12 12 chrX 105789379 105790714 -60859582 + Lx3_Mus LINE L1 5693 7009 0 4 1392 664 312 96 35 chrX 105790722 105790753 -60859543 + B4A SINE B4 49 79 -213 4 1392 450 0 0 0 chrX 105790753 105790803 -60859493 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 4 1392 664 312 96 35 chrX 105790803 105791000 -60859296 + B4A SINE B4 80 291 -1 4 1392 353 75 19 0 chrX 105791023 105791076 -60859220 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1392 1139 78 0 0 chrX 105791443 105791584 -60858712 + B1_Mus1 SINE Alu 3 143 -5 4 1392 250 45 45 0 chrX 105791586 105791630 -60858666 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 4 1392 484 258 16 39 chrX 105791671 105791800 -60858496 + MLT1A0 LTR MaLR 204 329 -36 4 1392 2134 111 19 19 chrX 105791797 105792118 -60858178 - ORR1A3 LTR MaLR -5 321 1 4 1392 786 276 36 0 chrX 105792148 105792344 -60857952 - B3 SINE B2 -10 206 4 4 1392 229 92 8 0 chrX 105792479 105792528 -60857768 - ORR1B2 LTR MaLR -51 343 286 4 1392 553 291 58 42 chrX 105792526 105792716 -60857580 - B3A SINE B2 0 198 6 4 1392 3634 123 17 9 chrX 105792919 105792947 -60857349 - L1_Mm LINE L1 -1518 4365 4342 4 1392 1600 47 0 0 chrX 105792947 105793138 -60857158 - B2_Mm1t SINE B2 -2 191 1 4 1392 3634 123 17 9 chrX 105793138 105793693 -60856603 - L1_Mm LINE L1 -1542 4341 3777 4 1392 1648 106 30 8 chrX 105793686 105793953 -60856343 + L1_Mm LINE L1 4341 4613 -1270 4 1392 3139 95 5 9 chrX 105793971 105794419 -60855877 - L1_Mus3 LINE L1 0 6638 6193 4 1392 695 303 89 35 chrX 105794458 105794484 -60855812 - L1M4c LINE L1 -4776 1608 1579 4 1392 366 23 0 0 chrX 105794484 105794527 -60855769 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 1392 438 20 0 0 chrX 105794527 105794577 -60855719 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1392 695 309 87 34 chrX 105794577 105795432 -60854864 - L1M4c LINE L1 -4516 1787 806 4 1392 303 298 17 88 chrX 105796034 105796369 -60853927 - L1M4 LINE L1 -352 5832 5529 4 1392 7150 143 17 11 chrX 105797291 105799282 -60851014 + Lx LINE L1 4659 6644 -10 4 1392 21 82 0 0 chrX 105799558 105799607 -60850689 + AT_rich Low_complexity Low_complexity 1 49 0 4 1392 239 374 0 24 chrX 105799627 105799712 -60850584 + MLT1A0 LTR MaLR 25 107 -258 4 1392 365 345 83 22 chrX 105799974 105800155 -60850141 + ORR1E LTR MaLR 1 192 -167 4 1392 316 104 0 59 chrX 105800278 105800329 -60849967 + U6 snRNA snRNA 1 48 -59 4 1392 7665 66 11 1 chrX 105800329 105801394 -60848902 + L1_Mus1 LINE L1 5489 6563 -4 4 1392 241 246 58 0 chrX 105802029 105802098 -60848198 + L1M5 LINE L1 2311 2383 -3763 4 1392 268 325 78 0 chrX 105802155 105802232 -60848064 + PB1D10 SINE Alu 27 109 -8 4 1392 210 158 0 0 chrX 105802241 105802279 -60848017 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 4 1392 29 70 0 0 chrX 105802412 105802469 -60847827 + AT_rich Low_complexity Low_complexity 1 57 0 4 1392 3728 126 8 7 chrX 105802528 105803119 -60847177 + Lx2A LINE L1 6408 6999 -9 4 1392 903 319 53 38 chrX 105803447 105804163 -60846133 + L1M2 LINE L1 2524 3250 -2893 4 1392 596 267 0 15 chrX 105804170 105804303 -60845993 + B3 SINE B2 1 131 -85 4 1392 248 262 0 0 chrX 105804580 105804641 -60845655 + L1M2 LINE L1 3509 3569 -2574 4 1392 6994 116 25 2 chrX 105804719 105806330 -60843966 - L1_Mus3 LINE L1 -7 6631 4987 4 1392 207 0 0 0 chrX 105806332 105806355 -60843941 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 1392 28559 93 9 37 chrX 105806355 105811393 -60838903 - L1Md_A LINE L1 -6 6576 1698 4 1392 2695 72 0 0 chrX 105811393 105811739 -60838557 + ORR1A0 LTR MaLR 1 346 0 4 1392 28559 170 21 82 chrX 105811739 105813002 -60837294 - L1Md_A LINE L1 -4186 1697 511 4 1392 7310 88 3 3 chrX 105813042 105814636 -60835660 - L1Md_F2 LINE L1 0 6582 4990 4 1392 3181 82 4 2 chrX 105814620 105815095 -60835201 - L1Md_F2 LINE L1 -4095 1788 1313 4 1392 3558 96 0 6 chrX 105815084 105815567 -60834729 - L1Md_F2 LINE L1 -5748 868 389 4 1392 311 304 62 43 chrX 105816200 105816415 -60833881 + L2a LINE L2 3190 3426 0 4 1392 319 360 103 45 chrX 105816913 105817224 -60833072 - MLT1I LTR MaLR -11 400 72 4 1392 25 0 0 0 chrX 105817805 105817830 -60832466 + AT_rich Low_complexity Low_complexity 1 25 0 4 1392 598 314 77 0 chrX 105818003 105818197 -60832099 - B3 SINE B2 -6 210 2 4 1392 25714 100 19 110 chrX 105818243 105823630 -60826666 + L1Md_F2 LINE L1 392 5234 -649 4 1392 234 0 0 0 chrX 105823630 105823656 -60826640 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 1392 25714 95 16 126 chrX 105823656 105823993 -60826303 + L1Md_F2 LINE L1 5235 5585 -298 4 1392 6869 92 5 13 chrX 105823994 105824986 -60825310 + L1Md_F2 LINE L1 5588 6571 -11 4 1392 2824 49 3 0 chrX 105825161 105825506 -60824790 + ORR1A0 LTR MaLR 1 346 0 4 1392 28 29 0 0 chrX 105825569 105825604 -60824692 + AT_rich Low_complexity Low_complexity 1 35 0 4 1392 225 65 0 0 chrX 105825604 105825635 -60824661 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 1392 597 64 0 0 chrX 105825645 105825723 -60824573 + (GA)n Simple_repeat Simple_repeat 1 78 0 4 1392 387 345 85 63 chrX 105825724 105825778 -60824518 - B3 SINE B2 -13 203 136 4 1392 513 0 0 0 chrX 105825778 105825835 -60824461 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 1392 430 332 6 27 chrX 105825835 105825969 -60824327 - B3A SINE B2 -81 135 11 4 1392 677 301 20 13 chrX 105826237 105826543 -60823753 - L1MA6 LINE L1 -432 5868 5561 4 1392 584 257 43 7 chrX 105826544 105826685 -60823611 - B3A SINE B2 -52 146 1 4 1392 812 284 65 15 chrX 105826744 105827083 -60823213 + L1M2 LINE L1 2346 2701 -4148 4 1392 283 281 93 47 chrX 105827518 105827773 -60822523 + L1M2 LINE L1 2926 3163 -3419 4 1392 447 68 0 0 chrX 105827835 105827894 -60822402 + (TA)n Simple_repeat Simple_repeat 2 60 0 4 1392 444 306 53 38 chrX 105828338 105828365 -60821931 - L1MA5 LINE L1 -191 5965 5940 4 1392 387 0 0 0 chrX 105828365 105828408 -60821888 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1392 667 247 53 16 chrX 105828408 105828642 -60821654 - L1MA5 LINE L1 -217 5939 5700 4 1392 390 114 0 0 chrX 105828766 105828836 -60821460 + (GA)n Simple_repeat Simple_repeat 1 70 0 4 1392 227 292 11 11 chrX 105829860 105829950 -60820346 - L1MA5 LINE L1 -2440 3703 3614 4 1392 436 216 54 9 chrX 105830020 105830132 -60820164 + Lx2B LINE L1 6879 6995 -5 4 1392 2338 201 45 19 chrX 105830142 105830645 -60819651 - Lx4B LINE L1 0 7058 6189 4 1392 6223 78 126 118 chrX 105830646 105831063 -60819233 + L1_Mm LINE L1 4371 4845 -1038 4 1392 279 264 36 79 chrX 105831063 105831203 -60819093 - MER72B LTR ERV1 -355 413 280 4 1392 6223 78 126 118 chrX 105831203 105831852 -60818444 + L1_Mm LINE L1 4846 5586 -297 4 1392 8183 32 11 1 chrX 105831852 105832836 -60817460 + L1Md_F2 LINE L1 5587 6580 -2 4 1392 233 349 43 50 chrX 105833225 105833364 -60816932 + MIR3 SINE MIR 40 177 -31 4 1392 29200 105 13 20 chrX 105833736 105839958 -60810338 - L1Md_F2 LINE L1 -15 6567 395 4 1392 1326 329 70 25 chrX 105840579 105841257 -60809039 + Lx9 LINE L1 6622 7439 -205 4 1392 219 114 0 0 chrX 105841257 105841292 -60809004 + (TATG)n Simple_repeat Simple_repeat 2 36 0 4 1392 1018 333 96 32 chrX 105841292 105841418 -60808878 + Lx9 LINE L1 7331 7472 -1 4 1392 283 326 24 6 chrX 105841894 105842009 -60808287 - MIRb SINE MIR -46 216 98 4 1392 673 241 60 40 chrX 105842154 105842305 -60807991 + RSINE1 SINE B4 12 165 0 4 1392 299 327 42 73 chrX 105843383 105843548 -60806748 + RSINE1 SINE B4 3 162 -3 4 1392 210 253 0 0 chrX 105843558 105843641 -60806655 + (ATG)n Simple_repeat Simple_repeat 2 84 0 4 1392 809 272 5 0 chrX 105843671 105843873 -60806423 + B3 SINE B2 1 203 -13 4 1392 30001 98 6 9 chrX 105843907 105849293 -60801003 + L1Md_F2 LINE L1 217 5586 -297 4 1392 7593 67 1 6 chrX 105849294 105850275 -60800021 + L1Md_F2 LINE L1 5588 6563 -19 4 1392 1957 100 0 29 chrX 105850277 105850586 -60799710 + L1Md_F2 LINE L1 5286 5585 -298 4 1392 6987 87 7 5 chrX 105850587 105851569 -60798727 + L1Md_F2 LINE L1 5587 6570 -12 4 1392 234 326 16 0 chrX 105851668 105851806 -60798490 + L1_Mur2 LINE L1 3483 3611 -2266 4 1392 941 297 45 37 chrX 105851816 105852355 -60797941 + L1M2 LINE L1 3561 4103 -2040 4 1392 8051 29 0 0 chrX 105852356 105853334 -60796962 - L1Md_T LINE L1 0 6582 5605 4 1392 993 42 0 3 chrX 105853329 105853461 -60796835 + L1Md_T LINE L1 5483 5640 -534 4 1392 331 309 12 101 chrX 105853489 105853658 -60796638 + L1MD LINE L1 4138 4291 -1855 4 1392 528 292 92 1 chrX 105854178 105854587 -60795709 + L1M2 LINE L1 4392 4824 -1056 4 1392 232 333 0 0 chrX 105854633 105854696 -60795600 - ID_B1 SINE B4 -77 147 85 4 1392 391 307 14 99 chrX 105854698 105855052 -60795244 + L1M2 LINE L1 4841 5164 -979 4 1392 204 273 28 70 chrX 105855273 105855344 -60794952 - MIR3 SINE MIR -15 193 126 4 1392 774 163 0 49 chrX 105855817 105855959 -60794337 + B1_Mus1 SINE Alu 6 140 -8 4 1392 309 266 57 101 chrX 105855823 105855961 -60794335 + B4A SINE B4 95 219 -73 4 1392 912 19 0 0 chrX 105855961 105856067 -60794229 + (GA)n Simple_repeat Simple_repeat 2 107 0 4 1392 309 266 57 101 chrX 105856067 105856087 -60794209 + B4A SINE B4 220 246 -46 4 1392 841 66 0 16 chrX 105856089 105856212 -60794084 + (GGAA)n Simple_repeat Simple_repeat 1 121 0 4 1392 345 62 0 0 chrX 105856287 105856335 -60793961 + (TTTTA)n Simple_repeat Simple_repeat 3 50 0 4 1392 1075 70 0 7 chrX 105856344 105856488 -60793808 - B1_Mm SINE Alu 0 147 5 4 1392 484 241 0 137 chrX 105856379 105856562 -60793734 - MT2B LTR ERVL -337 264 107 4 1392 1621 196 13 91 chrX 105858402 105858796 -60791500 + ORR1D1 LTR MaLR 4 366 -8 4 1392 549 118 0 52 chrX 105858798 105858914 -60791382 + L1_Mus2 LINE L1 6457 6566 0 4 1392 189 107 0 0 chrX 105858924 105858952 -60791344 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 4 1392 3481 3 8 0 chrX 105860946 105861336 -60788960 - L1Md_A LINE L1 0 6582 6190 4 1392 4555 65 10 0 chrX 105861424 105862009 -60788287 - L1_Mus1 LINE L1 -1 6566 5976 5 1392 1086 48 0 0 chrX 105862009 105862155 -60788141 + L1_Mus1 LINE L1 5838 5983 -583 5 1392 5768 97 28 13 chrX 105862160 105862905 -60787391 + Lx LINE L1 5779 6518 -136 5 1392 345 82 0 0 chrX 105862905 105862954 -60787342 + (TGGG)n Simple_repeat Simple_repeat 1 49 0 5 1392 5768 97 28 13 chrX 105862954 105863053 -60787243 + Lx LINE L1 6519 6635 -19 5 1392 4725 32 5 0 chrX 105863046 105863600 -60786696 + L1Md_F2 LINE L1 6011 6567 -15 5 1392 1180 85 0 0 chrX 105863716 105863880 -60786416 - L1_Mus1 LINE L1 0 6567 6404 5 1392 441 0 0 0 chrX 105863894 105863943 -60786353 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 5 1392 2579 252 60 56 chrX 105863955 105864663 -60785633 + Lx7 LINE L1 6685 7392 -304 5 1392 614 96 10 0 chrX 105864663 105864767 -60785529 + (TAGA)n Simple_repeat Simple_repeat 1 105 0 5 1392 2579 252 60 56 chrX 105864767 105865066 -60785230 + Lx7 LINE L1 7393 7696 0 5 1392 477 279 75 16 chrX 105865234 105865420 -60784876 - B3A SINE B2 0 198 2 5 1392 1115 284 22 43 chrX 105866354 105866630 -60783666 + MTEa LTR MaLR 24 293 -86 5 1392 384 362 89 25 chrX 105866897 105867132 -60783164 - L1MDa LINE L1 -6218 415 166 5 1392 739 340 12 32 chrX 105867477 105867783 -60782513 - MLT1A0 LTR MaLR -4 404 63 5 1392 1274 106 11 0 chrX 105867936 105868116 -60782180 - B2_Mm1t SINE B2 -10 183 2 5 1392 1301 180 22 42 chrX 105868166 105868486 -60781810 + Lx9 LINE L1 5579 5928 -1716 5 1392 315 0 0 0 chrX 105868486 105868521 -60781775 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1392 1042 263 43 57 chrX 105868521 105868623 -60781673 + Lx9 LINE L1 5929 6028 -1616 5 1392 314 295 99 5 chrX 105868936 105869137 -60781159 + L1MD LINE L1 5376 5595 -764 5 1392 499 276 186 12 chrX 105869424 105869563 -60780733 + Lx7 LINE L1 5626 5764 -1932 5 1392 378 0 0 0 chrX 105869563 105869605 -60780691 + (TTTA)n Simple_repeat Simple_repeat 4 45 0 5 1392 499 276 186 12 chrX 105869605 105869707 -60780589 + Lx7 LINE L1 5765 5908 -1788 5 1392 537 128 21 0 chrX 105869847 105869941 -60780355 - Lx9 LINE L1 -161 7483 7388 5 1392 1282 147 31 36 chrX 105869941 105869984 -60780312 - MTC LTR MaLR 0 421 385 5 1392 1773 147 208 178 chrX 105869984 105870654 -60779642 + RMER6C LTR ERVK 1 690 0 5 1392 1282 147 31 36 chrX 105870654 105870835 -60779461 - MTC LTR MaLR -37 384 198 5 1392 1160 201 63 45 chrX 105870862 105871196 -60779100 - Lx7 LINE L1 0 7696 7357 5 1392 198 171 0 0 chrX 105871197 105871238 -60779058 + GA-rich Low_complexity Low_complexity 2 42 0 5 1392 4699 210 28 38 chrX 105871294 105872523 -60777773 - Lx7 LINE L1 -238 7406 6221 5 1392 22 0 0 0 chrX 105872672 105872694 -60777602 + AT_rich Low_complexity Low_complexity 1 22 0 5 1392 457 301 67 49 chrX 105872736 105873187 -60777109 + L1MB8 LINE L1 5716 6174 -4 5 1392 1111 86 7 0 chrX 105873417 105873569 -60776727 + B2_Mm2 SINE B2 1 153 -42 5 1392 450 0 0 0 chrX 105873569 105873619 -60776677 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 1392 957 160 25 46 chrX 105873619 105873663 -60776633 + B2_Mm1t SINE B2 154 193 0 5 1392 260 301 119 12 chrX 105873776 105873860 -60776436 + B1F SINE Alu 27 119 -30 5 1392 460 274 26 9 chrX 105873976 105874090 -60776206 + B1F2 SINE Alu 25 140 -9 5 1392 206 106 43 57 chrX 105874128 105874198 -60776098 + T-rich Low_complexity Low_complexity 2 70 0 5 1392 557 246 8 0 chrX 105874240 105874358 -60775938 + B1_Mur4 SINE Alu 9 127 -23 5 1392 669 58 0 0 chrX 105874376 105874462 -60775834 + (GAAA)n Simple_repeat Simple_repeat 3 88 0 5 1392 696 271 22 87 chrX 105874979 105875296 -60775000 + L1VL1 LINE L1 15 485 -5933 5 1392 2883 115 8 4 chrX 105875349 105875845 -60774451 + MusHAL1 LINE L1 19 516 -2196 5 1392 16648 135 11 29 chrX 105875846 105880595 -60769701 + L1Md_F2 LINE L1 366 4907 -979 5 1392 898 106 8 0 chrX 105880597 105880729 -60769567 + L1Md_F2 LINE L1 5453 5585 -298 5 1392 7501 74 8 3 chrX 105880730 105881721 -60768575 + L1Md_F2 LINE L1 5587 6582 0 5 1392 10625 116 18 5 chrX 105881721 105881786 -60768510 + L1_Mus2 LINE L1 1647 1707 -4176 5 1392 2895 94 2 8 chrX 105881786 105882184 -60768112 + MTA_Mm LTR MaLR 1 396 0 5 1392 10625 116 18 5 chrX 105882184 105883910 -60766386 + L1_Mus2 LINE L1 1708 3461 -2422 5 1392 4352 77 28 6 chrX 105883909 105884562 -60765734 + L1Md_A LINE L1 413 1079 -5645 5 1392 7626 34 0 0 chrX 105884562 105885464 -60764832 + L1Md_T LINE L1 5680 6581 -1 5 1392 10242 157 20 53 chrX 105885464 105888716 -60761580 + L1_Mus2 LINE L1 3444 6566 0 5 1392 17351 91 25 11 chrX 105889391 105892708 -60757588 - L1VL4 LINE L1 0 3559 199 5 1392 995 236 109 50 chrX 105892708 105893065 -60757231 + MTE2a LTR MaLR 1 378 -1 5 1392 363 202 374 0 chrX 105893116 105893215 -60757081 + B1_Mur2 SINE Alu 1 136 -13 5 1392 1236 351 113 14 chrX 105893305 105894196 -60756100 + Lx8 LINE L1 6434 7412 -61 5 1392 191 370 102 16 chrX 105894579 105894766 -60755530 + MIR SINE MIR 60 262 0 5 1392 22 0 0 0 chrX 105894855 105894877 -60755419 + AT_rich Low_complexity Low_complexity 1 22 0 5 1392 2176 36 25 4 chrX 105894897 105895172 -60755124 - L1Md_F3 LINE L1 -2 6582 6302 5 1392 277 297 80 84 chrX 105895186 105895399 -60754897 + LTR37B LTR ERV1 257 468 0 5 1392 642 317 100 37 chrX 105895958 105896227 -60754069 + MTEa LTR MaLR 1 286 -93 5 1392 1157 245 32 9 chrX 105896332 105896678 -60753618 - L1MB4 LINE L1 -29 6151 5798 5 1392 300 27 0 0 chrX 105896682 105896719 -60753577 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1392 408 302 47 0 chrX 105896756 105896862 -60753434 - MER92C LTR ERV1 -443 111 1 5 1392 25 31 0 0 chrX 105897346 105897378 -60752918 + AT_rich Low_complexity Low_complexity 1 32 0 5 1392 255 273 57 11 chrX 105897904 105898015 -60752281 + B1F1 SINE Alu 10 110 -7 5 1392 21 0 0 0 chrX 105898111 105898132 -60752164 + AT_rich Low_complexity Low_complexity 1 21 0 5 1392 736 304 81 37 chrX 105899086 105899332 -60750964 + B4A SINE B4 4 260 -32 5 1392 1482 199 22 108 chrX 105900794 105901210 -60749086 - Lx2B LINE L1 0 7000 6621 5 1392 38 0 0 0 chrX 105901510 105901548 -60748748 + AT_rich Low_complexity Low_complexity 1 38 0 5 1392 1082 273 29 50 chrX 105901799 105902181 -60748115 + Lx6 LINE L1 7028 7401 -59 5 1392 931 158 149 25 chrX 105902274 105902475 -60747821 + URR1A DNA MER1_type 1 226 0 5 1392 266 0 29 0 chrX 105902547 105902581 -60747715 + (TAGA)n Simple_repeat Simple_repeat 3 37 0 5 1392 890 183 16 11 chrX 105902598 105902780 -60747516 - Lx9 LINE L1 -205 7439 7257 5 1392 986 322 121 25 chrX 105902781 105903543 -60746753 - Lx7 LINE L1 -11 7462 6605 5 1392 347 267 0 0 chrX 105903539 105903625 -60746671 + L1_Mur3 LINE L1 5495 5580 -300 5 1392 274 216 0 0 chrX 105903629 105903680 -60746616 - ORR1D2 LTR MaLR 0 370 320 5 1392 605 253 22 4 chrX 105903656 105903804 -60746492 - ORR1D2 LTR MaLR -204 155 1 5 1392 225 306 119 48 chrX 105904055 105904282 -60746014 + Tigger16a DNA Tigger 619 861 -72 5 1392 496 365 16 11 chrX 105904504 105904687 -60745609 + LTR65 LTR ERV1 473 656 -13 5 21 31292 94 15 1 chrX 105904770 105909629 -60740667 + L1Md_F2 LINE L1 315 5227 -656 5 1393 280 97 16 16 chrX 105909629 105909692 -60740604 + (TA)n Simple_repeat Simple_repeat 1 63 0 5 1393 31292 84 6 1 chrX 105909692 105910033 -60740263 + L1Md_F2 LINE L1 5228 5586 -297 5 1393 7288 75 2 9 chrX 105910033 105911023 -60739273 + L1Md_F2 LINE L1 5587 6569 -13 5 1393 465 323 15 15 chrX 105911872 105912007 -60738289 - RSINE1 SINE B4 -4 161 27 5 1393 284 292 119 97 chrX 105912357 105912709 -60737587 + LTR37B LTR ERV1 10 369 -99 5 1393 1823 114 3 114 chrX 105912725 105913102 -60737194 - BGLII LTR ERVK 0 421 87 5 1393 883 114 0 0 chrX 105913096 105913228 -60737068 + B1_Mus2 SINE Alu 16 147 0 5 1393 366 214 69 90 chrX 105913102 105913246 -60737050 + B4A SINE B4 106 246 -46 5 1393 396 143 0 0 chrX 105913246 105913316 -60736980 + (GAAA)n Simple_repeat Simple_repeat 3 72 0 5 1393 562 112 112 0 chrX 105913316 105913405 -60736891 - BGLII LTR ERVK -322 99 1 5 1393 192 97 0 0 chrX 105913694 105913725 -60736571 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1393 207 0 0 0 chrX 105914054 105914077 -60736219 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1393 32 0 0 0 chrX 105914680 105914712 -60735584 + AT_rich Low_complexity Low_complexity 1 32 0 5 1393 3832 158 11 11 chrX 105914988 105915634 -60734662 + L1VL2 LINE L1 96 741 -5594 5 1393 2598 131 75 0 chrX 105915619 105916084 -60734212 + L1_Mur1 LINE L1 3482 3981 -1905 5 1393 2795 128 34 19 chrX 105916084 105916561 -60733735 + Lx LINE L1 6167 6650 -4 5 1393 4037 203 192 16 chrX 105917476 105918479 -60731817 + Lx7 LINE L1 6234 7413 -283 5 1393 276 239 53 35 chrX 105918521 105918634 -60731662 + Lx7 LINE L1 7562 7676 -20 5 1393 7524 45 4 0 chrX 105918639 105919565 -60730731 - L1Md_F2 LINE L1 0 6582 5653 5 1393 3033 298 51 51 chrX 105920085 105921305 -60728991 + Lx8 LINE L1 5803 7022 -451 5 1393 264 77 0 0 chrX 105921329 105921368 -60728928 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1393 227 54 27 0 chrX 105921370 105921407 -60728889 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 5 1393 333 102 0 0 chrX 105921561 105921620 -60728676 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 5 1393 243 309 138 0 chrX 105921636 105921730 -60728566 + Lx8 LINE L1 7214 7320 -153 5 1393 297 0 0 0 chrX 105921817 105921850 -60728446 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 1393 230 312 13 0 chrX 105922036 105922113 -60728183 + ID4 SINE ID 1 78 -5 5 1393 998 311 89 16 chrX 105922581 105923006 -60727290 - RMER15-int LTR ERVL -3239 1760 1305 5 1393 343 133 67 0 chrX 105923247 105923322 -60726974 - L1Md_F2 LINE L1 -2 6580 6501 5 1393 780 258 157 11 chrX 105923672 105923946 -60726350 - RMER15 LTR ERVL -3 572 259 5 1393 272 304 117 54 chrX 105924089 105924405 -60725891 - L1M4b LINE L1 -1920 5086 4751 5 1393 183 298 64 0 chrX 105924682 105924729 -60725567 - L4 LINE RTE -939 1090 1041 5 1393 447 314 116 35 chrX 105925169 105925592 -60724704 - L1M4b LINE L1 -2327 4679 4223 5 1393 326 306 56 32 chrX 105925790 105925915 -60724381 + MLT1B LTR MaLR 249 376 -14 5 1393 335 240 143 0 chrX 105926169 105926323 -60723973 - L1M4b LINE L1 -3663 3671 3496 5 1393 879 242 16 16 chrX 105926329 105926518 -60723778 - B3 SINE B2 -4 212 24 5 1393 252 282 50 122 chrX 105926598 105926901 -60723395 - L1M4b LINE L1 -5911 1423 1143 5 1393 254 292 126 17 chrX 105927500 105927674 -60722622 - L1M4b LINE L1 -7123 211 19 5 1393 219 274 65 0 chrX 105928054 105928116 -60722180 + MIR SINE MIR 108 173 -89 5 1393 581 257 21 0 chrX 105928920 105929060 -60721236 + B1_Mur3 SINE Alu 3 145 -4 5 1393 396 0 0 0 chrX 105929060 105929104 -60721192 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 5 1393 447 267 34 88 chrX 105929379 105929398 -60720898 + B4 SINE B4 77 216 -76 5 1393 848 124 23 0 chrX 105929398 105929527 -60720769 + B1_Mur3 SINE Alu 8 139 -10 5 1393 29 0 0 0 chrX 105929605 105929634 -60720662 + AT_rich Low_complexity Low_complexity 1 29 0 6 1393 822 129 44 19 chrX 105930301 105930474 -60719822 + URR1B DNA MER1_type 62 225 0 6 1393 232 167 0 0 chrX 105930757 105930793 -60719503 + U6 snRNA snRNA 2 37 -70 6 1393 781 120 44 22 chrX 105930927 105931063 -60719233 - B1_Mur4 SINE Alu -1 149 11 6 1393 301 314 28 89 chrX 105931063 105931276 -60719020 + MIR SINE MIR 41 240 -22 6 1393 25 31 0 0 chrX 105932206 105932238 -60718058 + AT_rich Low_complexity Low_complexity 1 32 0 6 1393 21 36 0 0 chrX 105933249 105933277 -60717019 + AT_rich Low_complexity Low_complexity 1 28 0 6 1393 22 35 0 0 chrX 105933926 105933955 -60716341 + AT_rich Low_complexity Low_complexity 1 29 0 6 1393 25 31 0 0 chrX 105936010 105936042 -60714254 + AT_rich Low_complexity Low_complexity 1 32 0 6 1393 301 188 24 0 chrX 105938024 105938109 -60712187 + (TG)n Simple_repeat Simple_repeat 1 87 0 6 1393 28 0 0 0 chrX 105938317 105938345 -60711951 + AT_rich Low_complexity Low_complexity 1 28 0 6 1393 211 258 0 22 chrX 105938619 105938754 -60711542 + CT-rich Low_complexity Low_complexity 3 134 0 6 1393 188 380 116 11 chrX 105939402 105939583 -60710713 - L2b LINE L2 -1 3374 3175 6 1393 215 364 106 41 chrX 105939622 105939991 -60710305 - L2b LINE L2 -549 2870 2478 6 1393 414 259 0 0 chrX 105940037 105940153 -60710143 + GA-rich Low_complexity Low_complexity 2 117 0 6 1393 335 310 74 31 chrX 105940153 105940425 -60709871 + HAL1-3A_ME LINE L1 2285 2439 -419 6 1393 349 125 0 53 chrX 105940429 105940505 -60709791 + GA-rich Low_complexity Low_complexity 1 72 0 6 1393 364 264 65 19 chrX 105940915 105941023 -60709273 + MLT1A LTR MaLR 3 115 -259 6 1393 248 344 52 0 chrX 105941285 105941381 -60708915 + MLT1A LTR MaLR 367 467 0 6 1393 509 293 108 25 chrX 105941454 105941650 -60708646 + B3A SINE B2 1 212 -4 6 1393 301 268 8 118 chrX 105941944 105941960 -60708336 + MT2B LTR ERVL 151 152 -449 6 1393 550 261 43 29 chrX 105941960 105942098 -60708198 + B1F2 SINE Alu 1 140 -9 6 1393 1281 0 0 34 chrX 105942188 105942363 -60707933 + (CAAGG)n Simple_repeat Simple_repeat 5 173 0 6 1393 874 100 0 67 chrX 105942440 105942723 -60707573 + (CAGGG)n Simple_repeat Simple_repeat 1 263 0 6 1393 1140 103 0 3 chrX 105942727 105943087 -60707209 + (GGA)n Simple_repeat Simple_repeat 1 358 0 6 1393 237 242 0 0 chrX 105943089 105943151 -60707145 + GA-rich Low_complexity Low_complexity 3 64 0 6 1393 1092 89 0 0 chrX 105943153 105943516 -60706780 + (GGA)n Simple_repeat Simple_repeat 1 363 0 6 1393 192 77 0 0 chrX 105943516 105943541 -60706755 + (CAAAG)n Simple_repeat Simple_repeat 4 29 0 6 1393 206 163 61 0 chrX 105943821 105943870 -60706426 + A-rich Low_complexity Low_complexity 4 55 0 6 1393 296 293 49 0 chrX 105944880 105944962 -60705334 + PB1D10 SINE Alu 10 95 -22 6 1393 277 156 0 0 chrX 105944981 105945026 -60705270 + U2 snRNA snRNA 1 45 -143 6 1393 920 243 15 0 chrX 105945145 105945351 -60704945 + B3 SINE B2 2 210 -6 6 1393 302 313 14 29 chrX 105946441 105946579 -60703717 + L1M5 LINE L1 5566 5701 -423 6 1393 653 327 63 19 chrX 105946643 105946958 -60703338 + Lx7 LINE L1 6820 7148 -548 6 1393 26 30 0 0 chrX 105948813 105948846 -60701450 + AT_rich Low_complexity Low_complexity 1 33 0 6 1393 1078 61 20 20 chrX 105949780 105949930 -60700366 + B1_Mur4 SINE Alu 1 150 0 6 1393 460 248 90 8 chrX 105950461 105950595 -60699701 - B1_Mur1 SINE Alu -2 147 3 6 1393 548 292 134 10 chrX 105951294 105951488 -60698808 + MER68 LTR ERVL 160 377 -186 6 1393 313 291 191 0 chrX 105953316 105953426 -60696870 + RSINE1 SINE B4 14 144 -21 6 1393 300 27 0 0 chrX 105953462 105953499 -60696797 + (CATA)n Simple_repeat Simple_repeat 4 40 0 6 1393 252 59 0 0 chrX 105953499 105953532 -60696764 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1393 600 192 157 29 chrX 105955871 105956075 -60694221 - Tigger7 DNA MER2_type -129 2362 2133 6 1393 313 415 51 4 chrX 105956097 105956332 -60693964 - Tigger7 DNA MER2_type -2244 247 2 6 1393 189 0 0 0 chrX 105956791 105956812 -60693484 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1393 443 238 48 0 chrX 105956886 105956991 -60693305 + PB1D9 SINE Alu 2 111 -9 6 1393 782 201 0 0 chrX 105957728 105957867 -60692429 - B1_Mur4 SINE Alu -9 141 3 6 1393 22 35 0 0 chrX 105957867 105957896 -60692400 + AT_rich Low_complexity Low_complexity 1 29 0 6 1393 515 342 19 25 chrX 105958107 105958269 -60692027 + RSINE1 SINE B4 5 165 0 6 1393 279 0 0 0 chrX 105958455 105958486 -60691810 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1393 606 230 58 19 chrX 105958487 105958642 -60691654 - Lx9 LINE L1 -444 7200 7040 6 1393 601 242 0 85 chrX 105958644 105958820 -60691476 + Lx9 LINE L1 7257 7417 -227 6 1393 284 173 84 24 chrX 105958818 105958901 -60691395 + Lx9 LINE L1 7557 7644 0 6 1393 236 362 60 13 chrX 105959065 105959216 -60691080 - MIRb SINE MIR -109 159 2 6 1393 753 237 55 20 chrX 105959913 105960115 -60690181 - B3 SINE B2 -7 209 1 6 1393 422 284 28 21 chrX 105960146 105960290 -60690006 - B1F SINE Alu 0 149 5 6 1393 444 294 64 64 chrX 105961405 105961656 -60688640 + MLT1C LTR MaLR 68 318 -149 6 1393 384 40 0 0 chrX 105961961 105962011 -60688285 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1393 463 264 55 35 chrX 105962762 105962907 -60687389 + RSINE1 SINE B4 2 149 -16 6 1393 1090 194 66 10 chrX 105963035 105963233 -60687063 - B3 SINE B2 -6 210 2 6 1393 683 159 105 8 chrX 105964683 105964816 -60685480 + B1_Mur2 SINE Alu 1 146 -3 6 1393 5474 62 8 0 chrX 105965830 105966540 -60683756 - L1_Mus1 LINE L1 -4 6563 5848 6 1393 266 61 0 0 chrX 105966540 105966573 -60683723 + L1_Mus1 LINE L1 5855 5887 -680 6 1393 294 29 0 0 chrX 105967058 105967093 -60683203 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1393 381 43 0 0 chrX 105967105 105967152 -60683144 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1393 587 168 0 53 chrX 105967277 105967390 -60682906 + B1_Mur1 SINE Alu 24 130 -19 6 1393 348 284 12 24 chrX 105967606 105967689 -60682607 - PB1D10 SINE Alu -35 82 1 6 1393 355 271 140 0 chrX 105968241 105968348 -60681948 - MER58B DNA MER1_type -1 340 219 6 1393 357 330 127 19 chrX 105968965 105969289 -60681007 - L1MB1 LINE L1 -155 6013 5655 6 1393 225 0 0 0 chrX 105969427 105969452 -60680844 + (TA)n Simple_repeat Simple_repeat 1 25 0 6 1393 411 113 0 0 chrX 105969495 105969557 -60680739 + (TG)n Simple_repeat Simple_repeat 2 63 0 6 1393 231 145 43 0 chrX 105969560 105969629 -60680667 + (TA)n Simple_repeat Simple_repeat 2 73 0 6 1393 246 275 87 0 chrX 105970447 105970516 -60679780 + ID SINE ID 1 75 -149 6 1393 308 315 91 18 chrX 105970845 105970955 -60679341 + PB1D7 SINE Alu 1 118 -2 6 1393 564 206 244 30 chrX 105971015 105971245 -60679051 + B4A SINE B4 1 279 -13 6 1393 1077 78 0 0 chrX 105971314 105971455 -60678841 + B1_Mus1 SINE Alu 1 141 -7 6 1393 300 27 0 0 chrX 105971455 105971492 -60678804 + (CAA)n Simple_repeat Simple_repeat 2 38 0 6 1393 298 314 65 16 chrX 105971519 105971642 -60678654 - B1F SINE Alu -20 129 1 6 1393 24 32 0 0 chrX 105972826 105972857 -60677439 + AT_rich Low_complexity Low_complexity 1 31 0 6 1393 915 144 14 0 chrX 105972857 105973003 -60677293 - B1_Mus1 SINE Alu 0 148 1 6 1393 1524 59 15 0 chrX 105973053 105973256 -60677040 + L1_Mus2 LINE L1 6360 6565 -1 6 1393 243 0 0 0 chrX 105973281 105973308 -60676988 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1393 21 0 0 0 chrX 105973911 105973932 -60676364 + AT_rich Low_complexity Low_complexity 1 21 0 6 1393 527 248 21 35 chrX 105974080 105974222 -60676074 - B1F SINE Alu -9 140 1 6 1393 397 293 0 33 chrX 105974568 105974688 -60675608 + PB1D10 SINE Alu 1 116 -1 6 1393 21 36 0 0 chrX 105975561 105975589 -60674707 + AT_rich Low_complexity Low_complexity 1 28 0 6 1393 270 0 0 0 chrX 105975666 105975696 -60674600 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 6 1393 378 0 0 0 chrX 105975772 105975814 -60674482 + (TTTA)n Simple_repeat Simple_repeat 4 45 0 6 1393 224 257 77 51 chrX 105976103 105976181 -60674115 + B1_Mus1 SINE Alu 1 80 -68 6 1393 994 293 89 26 chrX 105976190 105976765 -60673531 + L1_Mur3 LINE L1 3345 3955 -1925 6 1393 416 330 48 38 chrX 105976772 105976937 -60673359 + B3A SINE B2 6 173 -25 6 1393 497 80 13 0 chrX 105976937 105977012 -60673284 + (CA)n Simple_repeat Simple_repeat 1 76 0 6 1393 416 330 48 38 chrX 105977012 105977032 -60673264 + B3A SINE B2 174 193 -5 6 1393 1168 196 15 0 chrX 105977053 105977252 -60673044 + B3 SINE B2 6 207 -9 6 1393 551 276 100 103 chrX 105977263 105977516 -60672780 + L1_Mur1 LINE L1 3946 4227 -1659 6 1393 677 234 124 11 chrX 105977516 105977702 -60672594 + B3 SINE B2 4 210 -6 6 1393 551 276 100 103 chrX 105977702 105977828 -60672468 + L1_Mur1 LINE L1 4228 4324 -1562 6 1393 3026 76 42 7 chrX 105977829 105978254 -60672042 + L1Md_F2 LINE L1 6143 6582 0 6 1393 242 254 163 21 chrX 105978497 105978638 -60671658 - L1MC LINE L1 -2259 5526 5366 6 1393 316 250 15 46 chrX 105979031 105979161 -60671135 + L1M3 LINE L1 4352 4477 -1663 6 1393 264 266 178 76 chrX 105980228 105980283 -60670013 + ID_B1 SINE B4 80 129 -95 6 1393 1486 57 16 0 chrX 105980283 105980475 -60669821 + B2_Mm2 SINE B2 1 195 0 6 1393 264 266 178 76 chrX 105980475 105980537 -60669759 + ID_B1 SINE B4 130 209 -15 6 1393 189 0 0 0 chrX 105980538 105980559 -60669737 + (TCC)n Simple_repeat Simple_repeat 1 21 0 6 1393 207 0 0 0 chrX 105980559 105980581 -60669715 + (CAA)n Simple_repeat Simple_repeat 1 23 0 6 1393 27 0 0 0 chrX 105980697 105980724 -60669572 + AT_rich Low_complexity Low_complexity 1 27 0 6 1393 340 355 89 0 chrX 105981500 105981624 -60668672 + ID_B1 SINE B4 81 215 -9 6 1393 243 299 130 0 chrX 105981745 105981822 -60668474 + PB1D10 SINE Alu 23 109 -8 6 1393 696 226 119 30 chrX 105982368 105982569 -60667727 + ID_B1 SINE B4 3 221 -3 6 1393 498 224 227 12 chrX 105982788 105982951 -60667345 + MER33 DNA MER1_type 7 204 -120 6 1393 472 279 16 0 chrX 105983119 105983241 -60667055 - B1F SINE Alu -10 139 16 7 1393 7487 68 8 1 chrX 105983768 105984741 -60665555 + L1_Mus1 LINE L1 5587 6566 -1 7 1393 314 224 90 0 chrX 105984924 105984991 -60665305 - PB1 SINE Alu -7 120 48 7 1393 1857 229 53 8 chrX 105985325 105985721 -60664575 + MTD LTR MaLR 1 414 -5 7 1393 577 286 266 50 chrX 105986664 105987138 -60663158 + L1MB8 LINE L1 5526 6102 -76 7 1393 577 167 8 8 chrX 105987265 105987392 -60662904 + GA-rich Low_complexity Low_complexity 2 128 0 7 1393 309 253 130 124 chrX 105987413 105987552 -60662744 + B3A SINE B2 4 176 -22 7 1393 303 71 0 0 chrX 105987552 105987594 -60662702 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 1393 309 253 130 124 chrX 105987594 105987639 -60662657 + B3A SINE B2 154 198 0 7 1393 609 309 0 48 chrX 105987648 105987835 -60662461 + B3A SINE B2 5 182 -16 7 1393 1133 68 0 7 chrX 105988650 105988788 -60661508 + B1_Mus2 SINE Alu 1 138 -9 7 1393 180 0 0 0 chrX 105988788 105988808 -60661488 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 7 1393 510 96 0 0 chrX 105988825 105988898 -60661398 + (GAAAA)n Simple_repeat Simple_repeat 3 75 0 7 1393 1319 276 46 48 chrX 105990840 105991426 -60658870 + L1MA4A LINE L1 5340 5924 -379 7 1393 468 0 0 0 chrX 105991999 105992051 -60658245 + (GAAAA)n Simple_repeat Simple_repeat 5 56 0 7 1393 326 316 25 41 chrX 105992383 105992505 -60657791 + ID_B1 SINE B4 104 223 -1 7 1393 674 278 0 12 chrX 105992510 105992674 -60657622 + RSINE1 SINE B4 4 165 0 7 1393 231 313 15 0 chrX 105992757 105992824 -60657472 + ID4_ SINE ID 3 70 -13 7 1393 27 49 0 0 chrX 105993161 105993202 -60657094 + AT_rich Low_complexity Low_complexity 1 41 0 7 1393 1319 57 0 11 chrX 105993694 105993871 -60656425 + B2_Mm2 SINE B2 2 176 -19 7 1393 311 316 145 0 chrX 105994292 105994409 -60655887 + RSINE1 SINE B4 7 140 -25 7 1393 628 287 20 77 chrX 105994564 105994760 -60655536 + B3A SINE B2 1 185 -13 7 1393 348 336 14 0 chrX 105994949 105995092 -60655204 - B1F2 SINE Alu -2 147 3 7 1393 249 33 0 0 chrX 105995269 105995299 -60654997 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 7 1393 881 121 11 60 chrX 105995299 105995483 -60654813 - Lx3_Mus LINE L1 -19 6990 6816 7 1393 386 270 0 0 chrX 105995646 105995720 -60654576 + ID4 SINE ID 1 74 -9 7 1393 541 333 71 5 chrX 105996016 105996200 -60654096 + MER58A DNA MER1_type 1 196 -28 7 1393 548 197 109 8 chrX 105996408 105996536 -60653760 - B1_Mur2 SINE Alu -7 142 2 7 1393 381 293 49 0 chrX 105996786 105996909 -60653387 + Lx9 LINE L1 7252 7380 -264 7 1393 30 27 0 0 chrX 105997061 105997098 -60653198 + AT_rich Low_complexity Low_complexity 1 37 0 7 1393 269 209 0 15 chrX 105997287 105997355 -60652941 + GA-rich Low_complexity Low_complexity 3 69 0 7 1393 347 336 74 48 chrX 105997456 105997725 -60652571 - L2 LINE L2 -545 2874 2599 7 1393 430 382 30 37 chrX 105998199 105998495 -60651801 - L2 LINE L2 -908 2511 2218 7 1393 23 33 0 0 chrX 105999758 105999788 -60650508 + AT_rich Low_complexity Low_complexity 1 30 0 7 1393 687 108 0 0 chrX 106001256 106001358 -60648938 + (GAAA)n Simple_repeat Simple_repeat 1 102 0 1 1393 27 49 0 0 chrX 106001493 106001534 -60648762 + AT_rich Low_complexity Low_complexity 1 41 0 2 1393 270 0 0 0 chrX 106001635 106001665 -60648631 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1393 213 108 0 0 chrX 106002290 106002327 -60647969 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 4 1393 233 0 62 0 chrX 106002371 106002403 -60647893 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1393 759 250 29 10 chrX 106002410 106002616 -60647680 - MER20 DNA MER1_type -3 216 7 6 1393 1602 274 116 53 chrX 106002747 106003948 -60646348 - L1M2 LINE L1 -1614 4529 3254 7 1393 416 305 23 8 chrX 106003994 106004123 -60646173 + Lx8 LINE L1 7113 7243 -230 8 1393 236 189 57 0 chrX 106004145 106004198 -60646098 + RMER15 LTR ERVL 403 458 -117 9 1393 370 222 101 23 chrX 106004365 106004494 -60645802 - L1M2 LINE L1 -2955 3188 3050 7 1393 429 271 144 0 chrX 106004736 106004917 -60645379 - L1M2 LINE L1 -3750 2393 2187 7 1393 726 293 65 15 chrX 106004923 106005397 -60644899 + L1M2 LINE L1 4545 5042 -1101 1 1393 320 285 115 54 chrX 106005412 106005690 -60644606 + L1M2 LINE L1 5100 5394 -749 1 1393 366 320 13 0 chrX 106005871 106006027 -60644269 + L1M2 LINE L1 5541 5698 -593 1 1393 505 246 145 4 chrX 106006107 106006348 -60643948 + L1M2 LINE L1 4537 4811 -1332 1 1393 500 244 99 9 chrX 106006353 106006564 -60643732 + L1M2 LINE L1 5075 5304 -839 1 1393 231 364 0 0 chrX 106006664 106006756 -60643540 - ID4 SINE ID -60 92 1 1 1393 280 276 12 50 chrX 106006768 106006848 -60643448 + MER2 DNA MER2_type 267 343 -2 1 1393 804 168 22 14 chrX 106007249 106007388 -60642908 + B1_Mur4 SINE Alu 6 145 -5 1 1393 419 199 83 15 chrX 106007489 106007622 -60642674 - Lx3A LINE L1 -5 6976 6835 1 1393 481 264 14 27 chrX 106008050 106008198 -60642098 + LTR65 LTR ERV1 18 163 -506 1 1393 313 301 181 31 chrX 106009109 106009236 -60641060 + RSINE1 SINE B4 4 149 -16 1 1393 315 0 0 0 chrX 106009276 106009311 -60640985 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1393 254 259 0 11 chrX 106009495 106009585 -60640711 + A-rich Low_complexity Low_complexity 2 90 0 1 1393 305 111 56 0 chrX 106010092 106010146 -60640150 - B1_Mur3 SINE Alu 0 149 93 2 1393 443 195 177 65 chrX 106010214 106010377 -60639919 - B1_Mur3 SINE Alu -1 148 5 2 1393 480 192 497 0 chrX 106010417 106010568 -60639728 + URR1A DNA MER1_type 1 226 0 2 1393 2187 16 12 0 chrX 106010572 106010827 -60639469 - L1Md_A LINE L1 0 6582 6325 2 1393 365 200 43 43 chrX 106010839 106010933 -60639363 - B1F2 SINE Alu -55 94 1 2 1393 204 40 0 0 chrX 106011240 106011265 -60639031 + (TA)n Simple_repeat Simple_repeat 1 25 0 2 1393 321 173 33 91 chrX 106011269 106011390 -60638906 + Lx9 LINE L1 7516 7629 -15 2 1393 775 229 60 22 chrX 106012738 106012921 -60637375 - B3 SINE B2 -11 205 16 2 1393 729 203 61 0 chrX 106012931 106013079 -60637217 - B3 SINE B2 -57 159 3 2 1393 517 224 185 37 chrX 106013347 106013509 -60636787 - B3 SINE B2 -11 205 20 2 1393 279 286 39 13 chrX 106013522 106013600 -60636696 + ID_B1 SINE B4 100 179 -45 3 1393 243 88 0 0 chrX 106013894 106013928 -60636368 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1393 323 331 33 46 chrX 106013932 106014084 -60636212 + ID_B1 SINE B4 39 188 -36 3 1393 212 263 39 69 chrX 106013996 106014098 -60636198 + B1F1 SINE Alu 23 121 -28 3 1393 226 311 0 0 chrX 106014146 106014191 -60636105 + ID4_ SINE ID 4 48 -35 3 1393 371 282 191 8 chrX 106014277 106014534 -60635762 + L1MD LINE L1 3941 4244 -1902 3 1393 692 277 106 35 chrX 106015269 106015610 -60634686 + L1ME2z LINE L1 5504 5868 -576 3 1393 523 244 25 0 chrX 106015630 106015749 -60634547 + B1F SINE Alu 27 148 -1 3 1393 353 86 46 28 chrX 106015920 106016028 -60634268 + A-rich Low_complexity Low_complexity 1 110 0 3 1393 253 356 14 0 chrX 106016146 106016292 -60634004 + L1ME2z LINE L1 6031 6178 -1 3 1393 292 252 54 0 chrX 106016431 106016509 -60633787 + ID4 SINE ID 10 89 -63 3 1393 509 144 252 0 chrX 106016552 106016663 -60633633 + B1_Mur3 SINE Alu 1 139 -10 4 1393 207 0 0 0 chrX 106016663 106016686 -60633610 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1393 237 129 147 56 chrX 106016924 106017003 -60633293 - PB1D9 SINE Alu 0 149 57 4 1393 276 321 111 0 chrX 106017188 106017269 -60633027 + PB1D7 SINE Alu 24 113 -7 4 1393 296 353 39 10 chrX 106017393 106017496 -60632800 + PB1D10 SINE Alu 1 106 -11 4 1393 222 125 0 24 chrX 106017499 106017540 -60632756 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 4 1393 534 216 158 16 chrX 106017545 106017672 -60632624 + B1_Mur1 SINE Alu 3 147 -2 4 1393 649 207 21 43 chrX 106017828 106017969 -60632327 - B1_Mur4 SINE Alu -7 143 6 4 1393 227 309 0 0 chrX 106018004 106018072 -60632224 + B1_Mur3 SINE Alu 1 68 -81 4 1393 21 0 0 0 chrX 106018135 106018156 -60632140 + AT_rich Low_complexity Low_complexity 1 21 0 4 1393 217 348 28 28 chrX 106018414 106018485 -60631811 + PB1 SINE Alu 1 71 -56 5 1393 347 283 159 41 chrX 106018460 106018531 -60631765 + ID_B1 SINE B4 40 206 -86 5 1393 545 194 0 64 chrX 106018531 106018641 -60631655 + PB1D9 SINE Alu 13 115 -5 5 1393 436 305 23 8 chrX 106019304 106019433 -60630863 + ID_B1 SINE B4 86 216 -8 5 1393 419 309 86 0 chrX 106019542 106019694 -60630602 + RSINE1 SINE B4 1 165 0 5 1393 201 138 0 0 chrX 106019694 106019723 -60630573 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1393 522 306 27 26 chrX 106019785 106020006 -60630290 + B3A SINE B2 1 216 0 5 1393 1120 56 14 0 chrX 106020423 106020567 -60629729 - B1_Mus1 SINE Alu -1 147 2 5 1393 21 36 0 0 chrX 106020645 106020673 -60629623 + AT_rich Low_complexity Low_complexity 1 28 0 5 1393 720 241 14 0 chrX 106020956 106021097 -60629199 + B1_Mur4 SINE Alu 3 145 -5 5 1393 282 278 189 0 chrX 106021137 106021227 -60629069 + B3A SINE B2 4 110 -88 6 1393 24 0 0 0 chrX 106021399 106021423 -60628873 + AT_rich Low_complexity Low_complexity 1 24 0 6 1393 374 203 0 63 chrX 106021532 106021611 -60628685 + PB1D9 SINE Alu 42 115 -5 6 1393 400 321 9 0 chrX 106021643 106021752 -60628544 + B1F SINE Alu 11 120 -29 6 1393 231 255 0 0 chrX 106021744 106021795 -60628501 + PB1 SINE Alu 75 125 -2 6 1393 1290 147 9 13 chrX 106021823 106022051 -60628245 + Lx3A LINE L1 6749 6975 -6 6 1393 183 42 0 0 chrX 106022302 106022326 -60627970 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1393 701 179 0 8 chrX 106022329 106022453 -60627843 - B1_Mur4 SINE Alu -17 133 11 6 1393 1049 209 5 19 chrX 106022475 106022680 -60627616 + B3 SINE B2 6 207 -9 6 1393 224 278 82 14 chrX 106022693 106022766 -60627530 + L2a LINE L2 3345 3422 -4 6 1393 560 130 109 44 chrX 106023284 106023421 -60626875 - B1_Mus2 SINE Alu -1 146 1 7 1393 286 234 0 189 chrX 106023594 106023726 -60626570 + MT2B LTR ERVL 151 257 -344 7 1393 480 209 24 80 chrX 106023623 106023748 -60626548 + B1_Mur3 SINE Alu 11 128 -21 7 1393 222 37 0 0 chrX 106023751 106023778 -60626518 + (AGGGGG)n Simple_repeat Simple_repeat 5 31 0 7 1393 783 270 71 0 chrX 106024089 106024300 -60625996 + B4A SINE B4 3 228 -64 7 1393 769 50 20 0 chrX 106024379 106024478 -60625818 + Lx9 LINE L1 7332 7432 -212 7 1393 318 26 0 0 chrX 106025787 106025826 -60624470 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 1393 204 40 0 0 chrX 106025826 106025851 -60624445 + (GA)n Simple_repeat Simple_repeat 2 26 0 7 1393 600 53 0 0 chrX 106026013 106026089 -60624207 + (GAAA)n Simple_repeat Simple_repeat 3 78 0 7 1393 530 250 21 29 chrX 106026096 106026236 -60624060 + B1F SINE Alu 11 149 0 7 1393 25 0 0 0 chrX 106026284 106026309 -60623987 + AT_rich Low_complexity Low_complexity 1 25 0 8 1393 464 117 13 0 chrX 106028007 106028084 -60622212 + (GA)n Simple_repeat Simple_repeat 2 79 0 8 1393 316 310 0 65 chrX 106029660 106029798 -60620498 + G-rich Low_complexity Low_complexity 3 131 0 8 1393 225 280 129 0 chrX 106030044 106030137 -60620159 + MLT2F LTR ERVL 364 468 -195 8 1393 344 230 15 49 chrX 106030490 106030604 -60619692 - B1F SINE Alu -34 115 1 8 1393 1204 54 0 0 chrX 106031291 106031438 -60618858 + B1_Mus2 SINE Alu 1 147 0 8 1393 442 265 33 0 chrX 106031863 106031969 -60618327 + B1F SINE Alu 20 129 -20 8 1393 442 224 109 23 chrX 106032014 106032142 -60618154 - LTR41 LTR ERVL -627 141 3 8 1393 631 241 14 14 chrX 106032313 106032327 -60617969 - RSINE1 SINE B4 -20 145 133 8 1393 360 0 0 0 chrX 106032327 106032367 -60617929 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 1393 631 241 14 14 chrX 106032367 106032491 -60617805 - RSINE1 SINE B4 -33 132 7 8 1393 450 356 22 0 chrX 106032592 106032727 -60617569 + ID_B1 SINE B4 84 221 -3 9 1393 704 208 19 19 chrX 106032750 106032907 -60617389 + RSINE1 SINE B4 9 165 0 9 1393 638 274 81 108 chrX 106032954 106033471 -60616825 - MLT1C LTR MaLR 0 505 11 9 1393 183 129 0 0 chrX 106033487 106033518 -60616778 + (TTTTTA)n Simple_repeat Simple_repeat 4 34 0 9 1393 1061 61 0 114 chrX 106033527 106033694 -60616602 - B1_Mus1 SINE Alu 0 148 1 9 1393 1019 122 7 0 chrX 106033734 106033873 -60616423 - B1_Mus1 SINE Alu -8 140 1 9 1393 338 308 19 37 chrX 106033900 106034008 -60616288 - RSINE1 SINE B4 0 165 60 9 1393 497 271 29 72 chrX 106034043 106034182 -60616114 + RSINE1 SINE B4 27 159 -6 9 1393 426 284 148 67 chrX 106034248 106034359 -60615937 + L1M4b LINE L1 1632 1743 -5591 9 1393 1023 176 121 0 chrX 106034359 106034558 -60615738 + URR1A DNA MER1_type 1 223 -3 9 1393 426 284 148 67 chrX 106034558 106034892 -60615404 + L1M4b LINE L1 1744 2113 -5221 9 1393 438 308 8 32 chrX 106034908 106035141 -60615155 + L1M4b LINE L1 2155 2431 -4903 9 1393 352 283 62 52 chrX 106035277 106035374 -60614922 - PB1D10 SINE Alu -1 116 19 1 1393 269 299 34 93 chrX 106035379 106035497 -60614799 - Tigger7 DNA MER2_type -1872 619 509 1 1393 236 309 0 81 chrX 106035547 106035621 -60614675 - ID4 SINE ID -8 75 8 1 1393 568 288 7 7 chrX 106035687 106035827 -60614469 - ID_B1 SINE B4 -1 223 84 1 1393 2069 36 16 6 chrX 106035860 106036129 -60614167 + L1Md_F3 LINE L1 6284 6563 -21 1 1393 195 42 0 0 chrX 106036129 106036153 -60614143 + (GAA)n Simple_repeat Simple_repeat 2 25 0 1 1393 335 312 7 120 chrX 106036223 106036300 -60613996 - RSINE1 SINE B4 -36 129 53 1 1393 909 139 15 0 chrX 106036300 106036437 -60613859 + B1_Mur4 SINE Alu 5 143 -7 1 1393 335 312 7 120 chrX 106036437 106036501 -60613795 - RSINE1 SINE B4 -113 52 4 1 1393 284 311 69 48 chrX 106036851 106037116 -60613180 + MTEa LTR MaLR 96 367 -12 1 174 1592 281 102 76 chrX 106037127 106037296 -60613000 + L1M4b LINE L1 4775 4953 -2053 9 1394 849 251 0 39 chrX 106037296 106037528 -60612768 - ID_B1 SINE B4 0 224 2 1 1394 1592 281 102 76 chrX 106037528 106037878 -60612418 + L1M4b LINE L1 4954 5329 -1677 9 1394 874 101 28 28 chrX 106037878 106038021 -60612275 + B1_Mur4 SINE Alu 1 143 -7 1 1394 1592 281 102 76 chrX 106038021 106038749 -60611547 + L1M4b LINE L1 5330 6055 -951 9 1394 207 100 0 0 chrX 106038854 106038884 -60611412 + (GAGAA)n Simple_repeat Simple_repeat 5 34 0 1 1394 611 240 40 0 chrX 106038884 106039009 -60611287 + B1_Mur1 SINE Alu 14 143 -6 1 1394 357 24 0 0 chrX 106039024 106039066 -60611230 + (GGGA)n Simple_repeat Simple_repeat 1 42 0 1 1394 820 150 30 0 chrX 106039068 106039201 -60611095 + B1_Mur3 SINE Alu 5 141 -8 1 1394 262 136 222 12 chrX 106039390 106039498 -60610798 + L1M4b LINE L1 6425 6566 -472 9 1394 435 279 82 73 chrX 106039653 106039784 -60610512 + L1MB8 LINE L1 5697 5840 -339 1 1394 342 45 0 0 chrX 106039784 106039828 -60610468 + (TCTA)n Simple_repeat Simple_repeat 4 47 0 1 1394 435 278 72 81 chrX 106039828 106040100 -60610196 + L1MB8 LINE L1 5841 6109 -69 1 1394 395 329 0 49 chrX 106040138 106040301 -60609995 - RSINE1 SINE B4 -8 157 3 1 1394 902 109 0 114 chrX 106040915 106041081 -60609215 + B1_Mus1 SINE Alu 1 147 -1 1 1394 272 244 100 25 chrX 106041113 106041193 -60609103 - MTE2a LTR MaLR -292 87 2 1 1394 297 280 54 77 chrX 106041414 106041602 -60608694 + ORR1A3 LTR MaLR 3 188 -139 1 1394 694 282 18 31 chrX 106041780 106042003 -60608293 - ID_B1 SINE B4 -2 222 3 1 1394 278 395 31 6 chrX 106042100 106042263 -60608033 - MIRb SINE MIR -23 245 79 1 1394 325 340 0 46 chrX 106042351 106042459 -60607837 - ID_B1 SINE B4 -29 195 93 1 1394 1209 54 0 0 chrX 106042545 106042692 -60607604 - B1_Mm SINE Alu 0 147 1 1 1394 446 167 13 0 chrX 106042963 106043041 -60607255 - B3 SINE B2 -119 97 19 1 1394 481 333 7 15 chrX 106043059 106043196 -60607100 - ID_B1 SINE B4 -10 214 79 1 1394 593 304 0 60 chrX 106043536 106043704 -60606592 + RSINE1 SINE B4 8 165 0 1 1394 345 330 0 20 chrX 106043785 106043887 -60606409 + ID_B1 SINE B4 86 185 -39 1 1394 444 227 53 35 chrX 106044085 106044199 -60606097 - PB1D7 SINE Alu 0 120 5 1 1394 575 272 0 103 chrX 106044286 106044440 -60605856 - ID_B1 SINE B4 -7 217 81 1 1394 6511 86 3 2 chrX 106044567 106045462 -60604834 - L1_Mus3 LINE L1 0 6638 5743 1 1394 2414 117 10 27 chrX 106045462 106045866 -60604430 - L1_Mm LINE L1 -1533 4350 3954 1 1394 7639 100 13 2 chrX 106045861 106047011 -60603285 - MusHAL1 LINE L1 -323 2389 1227 1 1394 1410 265 17 19 chrX 106047007 106047469 -60602827 - L1VL4 LINE L1 -5603 957 512 1 1394 532 204 48 0 chrX 106047575 106047678 -60602618 - ID_B1 SINE B4 -7 217 110 1 1394 25 31 0 0 chrX 106047748 106047780 -60602516 + AT_rich Low_complexity Low_complexity 1 32 0 1 1394 413 175 71 8 chrX 106047947 106048074 -60602222 - Lx9 LINE L1 -31 7613 7479 1 1394 312 188 25 0 chrX 106048086 106048166 -60602130 - Lx9 LINE L1 -142 7502 7421 1 1394 204 143 29 0 chrX 106048168 106048203 -60602093 + (TATATG)n Simple_repeat Simple_repeat 6 41 0 1 1394 519 328 82 34 chrX 106048245 106048453 -60601843 - B4A SINE B4 -68 224 7 1 1394 1121 88 0 7 chrX 106048587 106048735 -60601561 + B1_Mus1 SINE Alu 2 148 0 1 1394 240 35 0 0 chrX 106048746 106048775 -60601521 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1394 522 237 35 41 chrX 106049116 106049261 -60601035 - B1F SINE Alu -5 144 1 1 1394 265 278 65 47 chrX 106050320 106050413 -60599883 + LTR41 LTR ERVL 596 695 -73 1 1394 309 244 39 0 chrX 106050413 106050491 -60599805 - ID4_ SINE ID -1 82 2 1 1394 265 278 65 47 chrX 106050491 106050567 -60599729 + LTR41 LTR ERVL 696 768 0 1 1394 629 257 41 41 chrX 106050993 106051188 -60599108 - B3A SINE B2 -1 197 3 1 1394 250 332 52 120 chrX 106051332 106051599 -60598697 - L2c LINE L2 -151 3236 2988 1 1394 345 246 81 16 chrX 106051695 106051808 -60598488 - Lx7 LINE L1 0 7696 7575 1 1394 213 65 0 0 chrX 106051808 106051839 -60598457 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1394 1201 27 7 7 chrX 106052102 106052249 -60598047 - B1_Mm SINE Alu 0 147 1 1 1394 204 132 0 26 chrX 106052342 106052381 -60597915 + A-rich Low_complexity Low_complexity 2 39 0 1 1394 2311 254 72 9 chrX 106052390 106053039 -60597257 - Lx7 LINE L1 -281 7415 6726 1 1394 535 273 71 26 chrX 106053289 106053443 -60596853 - B3A SINE B2 0 198 38 1 1394 1750 140 69 32 chrX 106053443 106053789 -60596507 + ORR1B2 LTR MaLR 1 359 -8 1 1394 522 0 0 0 chrX 106053853 106053911 -60596385 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 1394 438 303 79 63 chrX 106054092 106054123 -60596173 - B3A SINE B2 0 198 172 1 1394 342 0 0 0 chrX 106054123 106054161 -60596135 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1394 438 303 79 63 chrX 106054161 106054282 -60596014 - B3A SINE B2 -27 171 46 1 1394 1193 206 9 0 chrX 106054282 106054505 -60595791 + URR1B DNA MER1_type 1 225 0 1 1394 438 303 79 63 chrX 106054505 106054541 -60595755 - B3A SINE B2 -153 45 7 1 1394 211 329 42 28 chrX 106054609 106054681 -60595615 - L2b LINE L2 -15 3360 3288 1 1394 781 133 78 0 chrX 106055030 106055158 -60595138 - B1_Mur3 SINE Alu -1 148 11 1 1394 382 268 117 93 chrX 106055260 106055474 -60594822 - MER20 DNA MER1_type 0 219 1 1 1394 602 196 56 70 chrX 106055497 106055640 -60594656 + B1_Mur1 SINE Alu 8 148 -1 1 1394 276 349 92 6 chrX 106055882 106056055 -60594241 - MIRb SINE MIR -46 222 35 1 1394 2256 69 3 3 chrX 106056141 106056433 -60593863 - L1_Mus2 LINE L1 -1 6565 6274 1 1394 484 326 58 7 chrX 106056599 106056738 -60593558 - RSINE1 SINE B4 -17 148 3 1 1394 344 317 48 0 chrX 106056855 106056959 -60593337 + B1F1 SINE Alu 41 149 0 1 1394 268 324 110 21 chrX 106057149 106057294 -60593002 + MIR3 SINE MIR 37 194 -14 1 1394 573 293 29 0 chrX 106057338 106057478 -60592818 + ID_B1 SINE B4 80 223 -1 1 1394 336 102 0 0 chrX 106057628 106057677 -60592619 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 1 1394 662 164 78 0 chrX 106057707 106057823 -60592473 - B3 SINE B2 -86 130 6 1 1394 207 0 0 0 chrX 106057923 106057946 -60592350 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1 1394 409 299 30 7 chrX 106057946 106058081 -60592215 - B1F SINE Alu -10 139 2 1 1394 463 276 177 5 chrX 106058521 106058741 -60591555 + Lx8 LINE L1 7216 7473 0 1 1394 24 77 0 0 chrX 106058834 106058886 -60591410 + AT_rich Low_complexity Low_complexity 1 52 0 1 1394 241 302 105 98 chrX 106059006 106059149 -60591147 + ORR1E LTR MaLR 1 144 -215 1 1394 315 0 0 0 chrX 106059536 106059571 -60590725 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1394 257 325 13 0 chrX 106059594 106059671 -60590625 - ID4 SINE ID -4 79 2 1 1394 419 277 30 37 chrX 106059835 106059970 -60590326 - ID_B1 SINE B4 -6 218 85 1 1394 237 242 0 0 chrX 106059976 106060038 -60590258 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 1394 725 327 29 0 chrX 106060038 106060243 -60590053 - ID_B1 SINE B4 -13 211 1 1 1394 619 267 7 0 chrX 106060316 106060462 -60589834 - B1_Mus1 SINE Alu 0 148 2 1 1394 404 259 129 37 chrX 106060751 106060886 -60589410 + B1F1 SINE Alu 2 148 -1 1 1394 1021 122 0 7 chrX 106061053 106061201 -60589095 - B1_Mur4 SINE Alu 0 150 4 1 1394 180 0 0 0 chrX 106061346 106061366 -60588930 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 1394 907 308 86 33 chrX 106061366 106061796 -60588500 - Lx9 LINE L1 -183 7461 7009 1 1394 1089 132 55 0 chrX 106061949 106062131 -60588165 - B2_Mm2 SINE B2 -3 192 1 1 1394 4070 241 51 26 chrX 106062262 106063553 -60586743 - Lx9 LINE L1 -1636 6008 4648 1 1394 289 183 17 0 chrX 106063556 106063616 -60586680 + ORR1D1 LTR MaLR 59 119 -255 1 1394 1681 281 70 35 chrX 106063689 106063738 -60586558 + L1_Rod LINE L1 2683 2730 -3117 1 1394 189 0 0 0 chrX 106063738 106063759 -60586537 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 1394 1681 281 70 35 chrX 106063759 106064506 -60585790 + L1_Rod LINE L1 2731 3506 -2341 1 1394 1009 227 5 10 chrX 106065094 106065303 -60584993 - B3 SINE B2 -7 209 2 1 1394 1143 252 95 13 chrX 106065307 106065697 -60584599 - L1MB2 LINE L1 -43 6128 5707 1 1394 243 301 12 0 chrX 106065836 106065919 -60584377 - L1MB2 LINE L1 -498 5673 5590 1 1394 725 226 96 35 chrX 106066119 106066316 -60583980 + MTD LTR MaLR 1 209 -210 1 1394 1169 62 7 0 chrX 106066318 106066464 -60583832 + B1_Mus1 SINE Alu 2 148 0 1 1394 194 0 0 37 chrX 106066464 106066491 -60583805 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 1 1394 249 33 0 0 chrX 106066504 106066534 -60583762 - B2_Mm2 SINE B2 -54 141 112 1 1394 312 304 150 60 chrX 106066520 106066535 -60583761 + MTD LTR MaLR 174 186 -210 1 1394 1234 104 28 0 chrX 106066535 106066717 -60583579 + B2_Mm2 SINE B2 2 188 -7 1 1394 461 224 202 2 chrX 106066717 106066834 -60583462 + MTD LTR MaLR 187 339 -80 1 1394 529 267 0 0 chrX 106067492 106067597 -60582699 - ID_B1 SINE B4 -37 187 83 1 1394 340 370 73 7 chrX 106067639 106067775 -60582521 - MER20B DNA MER1_type -569 214 70 1 1394 221 0 0 33 chrX 106067779 106067809 -60582487 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1394 1168 68 0 0 chrX 106067811 106067957 -60582339 + B1_Mm SINE Alu 2 147 0 1 1394 225 65 0 0 chrX 106067957 106067988 -60582308 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1394 638 139 57 21 chrX 106068327 106068467 -60581829 - Lx4A LINE L1 -1 7057 6913 2 1394 213 330 70 0 chrX 106069095 106069195 -60581101 - MIR3 SINE MIR -6 202 96 2 1394 234 128 0 0 chrX 106069273 106069312 -60580984 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1394 438 299 10 41 chrX 106069319 106069462 -60580834 - RSINE1 SINE B4 -24 141 2 2 1394 264 286 126 0 chrX 106069591 106069710 -60580586 - ID_B1 SINE B4 0 224 91 2 1394 728 268 202 25 chrX 106069951 106070392 -60579904 + Charlie1 DNA MER1_type 1470 1988 -793 2 1394 1364 242 92 19 chrX 106070401 106070780 -60579516 - MTD LTR MaLR -8 411 5 2 1394 284 323 66 27 chrX 106071058 106071278 -60579018 - MIR SINE MIR -32 236 2 2 1394 7321 70 16 1 chrX 106071366 106072332 -60577964 - L1_Mus2 LINE L1 0 6566 5587 2 1394 5512 119 8 4 chrX 106072344 106073653 -60576643 - L1VL4 LINE L1 -1870 1947 628 2 1394 312 263 75 17 chrX 106073663 106073783 -60576513 - L1VL4 LINE L1 -5815 704 578 2 1394 855 271 15 83 chrX 106073834 106074232 -60576064 - L1VL1 LINE L1 -5981 437 84 2 1394 1556 194 15 66 chrX 106074294 106074347 -60575949 - ORR1C1 LTR MaLR 0 378 338 2 1394 414 0 0 0 chrX 106074347 106074393 -60575903 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 2 1394 1034 94 0 0 chrX 106074393 106074531 -60575765 - B1_Mus2 SINE Alu -9 138 1 2 1394 1556 194 15 66 chrX 106074531 106074808 -60575488 - ORR1C1 LTR MaLR -41 337 65 2 1394 1095 128 50 0 chrX 106074817 106074996 -60575300 + B2_Mm2 SINE B2 2 189 -6 2 1394 323 263 35 9 chrX 106075031 106075146 -60575150 - L1M2 LINE L1 -2251 3892 3775 2 1394 3686 286 68 26 chrX 106075228 106076458 -60573838 - Lx8 LINE L1 -2 7471 6191 2 1394 342 0 0 0 chrX 106076748 106076786 -60573510 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1394 434 244 151 62 chrX 106076842 106077279 -60573017 - L1MC5 LINE L1 -181 7780 7305 2 1394 477 329 18 18 chrX 106077315 106077479 -60572817 - RSINE1 SINE B4 0 165 2 2 1394 1198 41 7 0 chrX 106077527 106077672 -60572624 + B1_Mus1 SINE Alu 2 147 -1 2 1394 199 54 54 0 chrX 106077677 106077714 -60572582 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2 1394 691 171 24 24 chrX 106077740 106077866 -60572430 - B1_Mur4 SINE Alu 0 150 25 2 1394 323 283 107 62 chrX 106078125 106078415 -60571881 - L1MC5 LINE L1 -1023 6938 6636 2 1394 1173 123 0 6 chrX 106078781 106078953 -60571343 + B2_Mm2 SINE B2 3 173 -22 2 1394 654 49 0 0 chrX 106078953 106079035 -60571261 + (GGAA)n Simple_repeat Simple_repeat 4 85 0 2 1394 528 16 0 0 chrX 106079035 106079096 -60571200 + (GA)n Simple_repeat Simple_repeat 2 62 0 2 1394 641 64 0 21 chrX 106079117 106079213 -60571083 + L1_Mus1 LINE L1 6474 6567 0 2 1394 235 270 45 9 chrX 106079279 106079391 -60570905 + L1MEc LINE L1 2276 2391 -4009 2 1394 1207 224 76 36 chrX 106079404 106079760 -60570536 + ORR1D2 LTR MaLR 1 370 0 2 1394 320 210 48 0 chrX 106079760 106079822 -60570474 + ORR1D2-int LTR MaLR 1 65 -1305 2 1394 307 335 25 82 chrX 106080116 106080240 -60570056 + PB1D7 SINE Alu 3 118 -31 2 1394 552 106 0 0 chrX 106080595 106080680 -60569616 + (TC)n Simple_repeat Simple_repeat 2 86 0 2 1394 369 289 97 31 chrX 106080808 106081065 -60569231 - L1M2 LINE L1 -3133 3010 2737 2 1394 429 341 50 23 chrX 106081098 106081578 -60568718 - L1M2 LINE L1 -3500 2643 2151 2 1394 231 315 0 0 chrX 106082236 106082309 -60567987 - L1MEf LINE L1 -5630 570 498 2 1394 9621 57 1 22 chrX 106082551 106082811 -60567485 - L1_Mm LINE L1 -1455 4428 4196 2 1394 225 0 0 0 chrX 106082811 106082836 -60567460 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 1394 9621 57 1 22 chrX 106082836 106083876 -60566420 - L1_Mm LINE L1 -1688 4195 3156 2 1394 11570 55 0 0 chrX 106083874 106085313 -60564983 + L1_Mm LINE L1 4445 5883 0 2 1394 2940 49 0 0 chrX 106085320 106085688 -60564608 + L1Md_F3 LINE L1 6217 6584 0 2 1394 1929 151 9 0 chrX 106085711 106086030 -60564266 + ORR1A3 LTR MaLR 1 322 -4 2 1394 1931 223 92 38 chrX 106086467 106087077 -60563219 - Lx7 LINE L1 0 7696 7054 2 1394 2809 185 32 26 chrX 106087082 106087648 -60562648 - Lx7 LINE L1 -771 6925 6357 2 1394 4743 112 22 18 chrX 106087644 106088480 -60561816 + Lx7 LINE L1 5107 6187 -1509 2 1394 236 330 0 0 chrX 106088892 106088980 -60561316 + MurSatRep1 Unknown Unknown 641 728 -1409 2 1394 626 84 0 0 chrX 106088991 106089074 -60561222 - Lx LINE L1 -659 5995 5913 2 1394 3831 121 13 15 chrX 106089074 106089687 -60560609 + Lx LINE L1 6043 6654 0 2 1394 6184 60 1 1 chrX 106089692 106090477 -60559819 + L1_Mus1 LINE L1 5783 6567 0 2 1394 1076 179 25 5 chrX 106090482 106090679 -60559617 + Lx7 LINE L1 6171 6371 -1325 2 1394 265 302 163 0 chrX 106091034 106091120 -60559176 - B1F1 SINE Alu -40 109 10 2 1394 262 246 54 68 chrX 106091825 106091841 -60558455 - ID SINE ID -141 83 11 2 1394 298 241 35 0 chrX 106091841 106091899 -60558397 - ID4_ SINE ID -13 70 11 2 1394 264 317 75 56 chrX 106091927 106092034 -60558262 - PB1D10 SINE Alu -5 112 4 2 1394 516 256 144 4 chrX 106092138 106092409 -60557887 - L1M3 LINE L1 -1508 4632 4324 2 1394 1224 123 11 11 chrX 106092638 106092827 -60557469 - Lx4A LINE L1 -67 6991 6803 2 1394 270 151 0 0 chrX 106092853 106092906 -60557390 + Lx4A LINE L1 7005 7057 -1 2 1394 1414 132 0 0 chrX 106092912 106093125 -60557171 + L1_Mur2 LINE L1 5434 5646 -231 2 1394 1982 205 87 42 chrX 106093115 106093726 -60556570 + Lx4B LINE L1 6299 6986 -64 2 1394 525 32 0 0 chrX 106093770 106093833 -60556463 + (TTTTG)n Simple_repeat Simple_repeat 1 63 0 2 1394 978 112 0 0 chrX 106093833 106093967 -60556329 - B1_Mus1 SINE Alu -13 135 2 2 1394 522 345 19 19 chrX 106094250 106094463 -60555833 - Lx8 LINE L1 -292 7181 6969 2 1394 405 154 0 13 chrX 106094656 106094735 -60555561 + Lx LINE L1 6547 6624 -30 2 1394 180 0 0 0 chrX 106094735 106094755 -60555541 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 1394 2642 36 6 9 chrX 106095102 106095436 -60554860 - L1_Mus1 LINE L1 0 6567 6235 2 1394 4806 86 0 46 chrX 106095475 106096186 -60554110 - L1_Mur1 LINE L1 -204 5682 5005 2 1394 368 115 0 0 chrX 106096186 106096247 -60554049 + Lx3A LINE L1 6906 6966 -15 2 1394 360 64 0 0 chrX 106096247 106096294 -60554002 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 2 1394 817 231 29 6 chrX 106096390 106096560 -60553736 - B3 SINE B2 -42 174 1 2 1394 353 247 192 16 chrX 106097000 106097466 -60552830 - L1M4 LINE L1 -849 5442 4888 2 1394 233 73 158 35 chrX 106097582 106097639 -60552657 - Lx8 LINE L1 -3 7470 7407 2 1394 391 312 51 86 chrX 106097662 106097945 -60552351 + Lx7 LINE L1 6830 7107 -589 2 1394 22 70 0 0 chrX 106098142 106098185 -60552111 + AT_rich Low_complexity Low_complexity 1 43 0 2 1394 186 43 0 0 chrX 106098359 106098382 -60551914 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2 1394 1263 102 17 0 chrX 106098382 106098559 -60551737 - B2_Mm2 SINE B2 -14 181 2 2 1394 2873 296 94 39 chrX 106098701 106099973 -60550323 - Lx8 LINE L1 -2 7471 6131 2 1394 270 0 0 0 chrX 106101331 106101361 -60548935 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1394 516 81 0 33 chrX 106101923 106102013 -60548283 + (GAA)n Simple_repeat Simple_repeat 1 87 0 2 1394 180 250 159 0 chrX 106102598 106102642 -60547654 - L3 LINE CR1 -1515 2974 2924 2 1394 1287 57 11 0 chrX 106102719 106102896 -60547400 + L1_Mus2 LINE L1 6386 6564 -2 2 1394 1061 82 0 7 chrX 106103121 106103268 -60547028 + B1_Mm SINE Alu 2 147 0 2 1394 369 0 0 0 chrX 106103411 106103452 -60546844 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 2 1394 300 261 43 43 chrX 106103454 106103546 -60546750 - B1_Mm SINE Alu -12 135 44 2 1394 326 61 0 20 chrX 106103605 106103655 -60546641 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 2 1394 3063 58 15 0 chrX 106103720 106104118 -60546178 - L1_Mus1 LINE L1 0 6567 6164 2 1394 927 97 13 13 chrX 106104181 106104337 -60545959 - L1_Mus3 LINE L1 -7 6631 6476 2 1394 847 211 0 0 chrX 106104714 106104861 -60545435 + B1_Mus1 SINE Alu 2 148 0 2 1394 30 59 0 0 chrX 106104966 106105017 -60545279 + AT_rich Low_complexity Low_complexity 1 51 0 2 1394 572 148 439 0 chrX 106105083 106105238 -60545058 - URR1B DNA MER1_type -2 223 1 2 1394 981 150 0 0 chrX 106105461 106105621 -60544675 - Lx2 LINE L1 -434 6563 6404 2 1394 1594 122 83 4 chrX 106105621 106105885 -60544411 + Lx2 LINE L1 6711 6995 -2 2 1394 1149 54 7 0 chrX 106106136 106106283 -60544013 + B1_Mus1 SINE Alu 1 148 0 2 1394 205 51 0 49 chrX 106106285 106106326 -60543970 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1394 226 331 114 27 chrX 106106434 106106583 -60543713 + MIR SINE MIR 23 184 -78 2 1394 734 271 89 4 chrX 106106827 106107199 -60543097 + L1M4 LINE L1 5072 5478 -696 2 1394 513 278 78 22 chrX 106107292 106107474 -60542822 - B3 SINE B2 0 216 20 2 1394 320 287 96 0 chrX 106107442 106107557 -60542739 - MLT1A0 LTR MaLR -237 128 3 2 1394 365 184 59 76 chrX 106107576 106107694 -60542602 + Lx6 LINE L1 7289 7404 -56 2 1394 3665 45 2 0 chrX 106107770 106108219 -60542077 + L1Md_T LINE L1 6133 6582 0 2 1394 22 35 0 0 chrX 106108602 106108631 -60541665 + AT_rich Low_complexity Low_complexity 1 29 0 2 1394 1776 124 104 13 chrX 106108632 106108950 -60541346 - Lx3C LINE L1 -2 6974 6628 2 1394 700 164 82 0 chrX 106108953 106109075 -60541221 - B1_Mur2 SINE Alu -6 143 12 2 1394 264 30 0 0 chrX 106109199 106109232 -60541064 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1394 228 67 0 0 chrX 106109241 106109271 -60541025 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 1394 25515 69 1 16 chrX 106109394 106114476 -60535820 - L1Md_F LINE L1 -373 5510 511 2 1394 3585 135 83 18 chrX 106114471 106115345 -60534951 - L1_Mur1 LINE L1 -4526 1360 208 2 1394 1476 253 104 56 chrX 106115359 106116265 -60534031 - L1M2 LINE L1 -2118 4025 3077 2 1394 1180 186 18 5 chrX 106116265 106116487 -60533809 + URR1B DNA MER1_type 1 225 0 3 1394 4223 128 11 8 chrX 106116544 106117198 -60533098 - L1_Mus4 LINE L1 0 6636 5981 3 1394 1127 81 0 0 chrX 106117198 106117346 -60532950 - L1_Mus3 LINE L1 -432 6206 6059 3 1394 3844 72 8 8 chrX 106117351 106117866 -60532430 - L1Md_F2 LINE L1 -3 6579 6065 3 1394 12212 57 2 1 chrX 106117867 106120085 -60530211 - L1Md_F2 LINE L1 -12 6570 4351 3 1394 5002 73 1 9 chrX 106120085 106120753 -60529543 + L1Md_F2 LINE L1 5910 6572 -10 3 1394 2688 142 5 11 chrX 106120762 106121196 -60529100 + Lx2B LINE L1 6565 6995 -5 3 1394 235 188 103 81 chrX 106121556 106121643 -60528653 + MTE2a LTR MaLR 278 366 -13 3 1394 256 312 133 17 chrX 106121671 106121912 -60528384 - L1MD LINE L1 -1380 4766 4498 3 1394 1443 160 36 36 chrX 106122071 106122427 -60527869 + Lx9 LINE L1 7288 7643 -1 3 1394 218 296 73 102 chrX 106122482 106122628 -60527668 + B2_Mm2 SINE B2 1 142 -53 3 1394 225 0 0 0 chrX 106122628 106122653 -60527643 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1394 218 296 73 102 chrX 106122653 106122683 -60527613 + B2_Mm2 SINE B2 143 172 -23 3 1394 22 0 0 0 chrX 106122729 106122751 -60527545 + AT_rich Low_complexity Low_complexity 1 22 0 3 1394 549 252 0 0 chrX 106122767 106122882 -60527414 + PB1D9 SINE Alu 1 115 -5 3 1394 211 351 10 60 chrX 106123374 106123474 -60526822 - L3 LINE CR1 -517 3972 3878 3 1394 5207 140 36 18 chrX 106124769 106124924 -60525372 + Lx4B LINE L1 4829 4996 -881 3 1394 881 212 11 11 chrX 106124924 106125105 -60525191 + B2_Mm2 SINE B2 1 181 -14 3 1394 5207 140 36 18 chrX 106125105 106125849 -60524447 + Lx4B LINE L1 4997 5744 -133 3 1394 464 133 0 13 chrX 106125851 106125927 -60524369 + Lx4B LINE L1 6307 6381 -677 3 1394 282 291 84 42 chrX 106126556 106126746 -60523550 - L1MEc LINE L1 -4231 2169 1972 3 1394 457 230 16 66 chrX 106127047 106127168 -60523128 - PB1D10 SINE Alu 0 117 3 3 1394 4466 83 14 21 chrX 106127169 106127574 -60522722 + L1VL2 LINE L1 400 801 -5534 3 1394 1119 72 145 0 chrX 106127574 106127740 -60522556 + B2_Mm2 SINE B2 1 190 -5 3 1394 13822 79 20 20 chrX 106127740 106129018 -60521278 + L1VL2 LINE L1 802 2096 -1519 3 1394 861 127 10 156 chrX 106129018 106129223 -60521073 + B2_Mm1t SINE B2 5 179 -14 3 1394 13822 79 21 20 chrX 106129223 106130131 -60520165 + L1VL2 LINE L1 2097 2988 -627 3 1394 21 36 0 0 chrX 106130198 106130226 -60520070 + AT_rich Low_complexity Low_complexity 1 28 0 3 1394 666 103 26 0 chrX 106130230 106130346 -60519950 + Lx2A LINE L1 6850 6968 -40 3 1394 480 87 0 12 chrX 106130346 106130428 -60519868 + Lx2A LINE L1 6924 7004 -4 3 1394 1239 269 115 64 chrX 106130649 106131102 -60519194 - Lx8 LINE L1 -700 6773 6298 3 1394 543 297 41 51 chrX 106131544 106131739 -60518557 + B3A SINE B2 2 194 -4 3 1394 1173 190 5 5 chrX 106131751 106131973 -60518323 + L1_Mur3 LINE L1 298 519 -7209 3 1394 4103 171 27 36 chrX 106131970 106132864 -60517432 + L1_Mur3 LINE L1 2456 3341 -2539 3 1394 3195 150 60 3 chrX 106132853 106133423 -60516873 - Lx4B LINE L1 -809 6249 5648 3 1394 4771 146 20 12 chrX 106133424 106134234 -60516062 + Lx4B LINE L1 6239 7054 -4 3 1394 805 99 30 8 chrX 106134280 106134412 -60515884 + L1_Mur3 LINE L1 3392 3526 -2354 3 1394 449 283 10 10 chrX 106134413 106134513 -60515783 + B3 SINE B2 111 210 -6 3 1394 609 335 132 28 chrX 106134538 106134701 -60515595 - Lx8 LINE L1 -6 7467 7273 3 1394 846 147 275 6 chrX 106134701 106134879 -60515417 - URR1A DNA MER1_type 0 226 1 3 1394 609 335 132 28 chrX 106134879 106135185 -60515111 - Lx8 LINE L1 -201 7272 6949 3 1394 1588 249 53 15 chrX 106135187 106135582 -60514714 - MTD LTR MaLR -2 417 8 3 1394 1598 311 58 0 chrX 106135606 106136104 -60514192 - Lx8 LINE L1 -598 6875 6349 3 1394 357 131 346 48 chrX 106136191 106136295 -60514001 - B2_Mm2 SINE B2 -14 181 47 3 1394 992 150 72 0 chrX 106136312 106136479 -60513817 - B2_Mm1t SINE B2 -14 179 1 3 1394 1230 292 77 20 chrX 106136503 106136996 -60513300 + Lx8 LINE L1 5645 6165 -1308 3 1394 348 24 0 0 chrX 106136996 106137037 -60513259 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 1394 285 128 0 0 chrX 106137037 106137083 -60513213 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1394 398 308 115 27 chrX 106137226 106137556 -60512740 + L1M5 LINE L1 4245 4603 -1543 3 1394 2702 100 10 24 chrX 106137600 106138009 -60512287 - Lx2 LINE L1 0 6997 6595 3 1394 29 28 0 0 chrX 106139001 106139037 -60511259 + AT_rich Low_complexity Low_complexity 1 36 0 3 1394 235 326 65 29 chrX 106139321 106139460 -60510836 + MIRb SINE MIR 64 207 -61 3 1394 306 0 0 0 chrX 106139969 106140003 -60510293 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1394 230 182 30 0 chrX 106140632 106140698 -60509598 + Lx7 LINE L1 7611 7678 -18 3 1394 30 0 0 0 chrX 106140700 106140730 -60509566 + AT_rich Low_complexity Low_complexity 1 30 0 3 1394 21 0 0 0 chrX 106140922 106140943 -60509353 + AT_rich Low_complexity Low_complexity 1 21 0 3 1394 373 136 76 0 chrX 106141360 106141426 -60508870 - HAL1-3A_ME LINE L1 -812 2046 1976 3 1394 602 272 5 48 chrX 106141468 106141657 -60508639 - B3A SINE B2 -16 182 2 3 1394 379 366 0 0 chrX 106141898 106141999 -60508297 + PB1 SINE Alu 1 101 -26 3 1394 231 114 0 0 chrX 106143655 106143690 -60506606 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1394 225 303 121 84 chrX 106144059 106144225 -60506071 + B3A SINE B2 9 180 -18 3 1394 21 0 0 0 chrX 106144240 106144261 -60506035 + AT_rich Low_complexity Low_complexity 1 21 0 3 1394 4635 73 14 2 chrX 106145305 106145924 -60504372 - L1_Mus1 LINE L1 -1 6566 5940 3 1394 987 233 19 0 chrX 106146291 106146497 -60503799 - B3 SINE B2 -6 210 1 3 1394 312 300 56 0 chrX 106146510 106146600 -60503696 - ID_B1 SINE B4 -70 154 60 3 1394 352 359 11 0 chrX 106146832 106146924 -60503372 + PB1D10 SINE Alu 2 94 -23 3 1394 490 225 45 7 chrX 106146933 106147004 -60503292 + Lx5 LINE L1 6309 6399 -582 3 1394 1335 85 6 0 chrX 106147004 106147180 -60503116 + B2_Mm1t SINE B2 3 179 -14 3 1394 3648 201 30 24 chrX 106147180 106147879 -60502417 + Lx5 LINE L1 6349 7045 -5 3 1394 647 71 48 0 chrX 106148023 106148107 -60502189 - Lx2 LINE L1 -677 6320 6233 3 1394 4393 123 34 7 chrX 106148107 106148781 -60501515 + Lx2 LINE L1 6306 6997 0 3 1394 1489 215 40 6 chrX 106148782 106149133 -60501163 + Lx7 LINE L1 119 481 -7247 3 1394 675 140 0 0 chrX 106149137 106149244 -60501052 + Lx7 LINE L1 5149 5255 -625 3 1394 1047 218 79 31 chrX 106149245 106149563 -60500733 + Lx7 LINE L1 5763 6095 -1601 3 1394 1412 157 17 81 chrX 106149557 106149855 -60500441 + Lx6 LINE L1 6507 6785 -675 3 1394 382 245 142 0 chrX 106149975 106150078 -60500218 + B1_Mur4 SINE Alu 5 120 -29 3 1394 453 311 99 62 chrX 106150162 106150323 -60499973 + B3A SINE B2 1 167 -31 3 1394 333 47 0 0 chrX 106150335 106150378 -60499918 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1394 758 269 52 26 chrX 106150802 106151035 -60499261 + LTR40a LTR ERVL 10 248 -271 3 1394 659 312 26 0 chrX 106151036 106151190 -60499106 + RSINE1 SINE B4 4 161 -4 3 1394 33524 77 15 2 chrX 106151395 106156449 -60493847 - L1Md_F2 LINE L1 -1 6581 1457 3 1394 1423 44 44 0 chrX 106156449 106156631 -60493665 - B2_Mm1a SINE B2 -2 191 2 3 1394 33524 137 45 12 chrX 106156631 106157830 -60492466 - L1Md_F2 LINE L1 -4427 1456 234 3 1394 353 250 179 26 chrX 106158049 106158205 -60492091 + LTR40a LTR ERVL 340 519 0 3 1394 472 86 0 0 chrX 106158301 106158371 -60491925 - Lx2 LINE L1 -4 6996 6927 3 1394 4906 129 16 29 chrX 106158371 106159525 -60490771 - Lx2 LINE L1 -632 6365 5216 3 1394 755 293 50 50 chrX 106159547 106159870 -60490426 - L1MA4 LINE L1 -303 5997 5675 3 1394 1250 315 93 10 chrX 106160242 106160746 -60489550 - Lx8 LINE L1 -149 7324 6779 3 1394 466 317 76 0 chrX 106160771 106160916 -60489380 + Lx8 LINE L1 6456 6611 -862 3 1394 883 155 0 21 chrX 106160923 106161068 -60489228 - B1_Mur4 SINE Alu -7 143 2 3 1394 254 280 137 40 chrX 106161076 106161381 -60488915 - L1M2a LINE L1 -4798 2370 2000 3 1394 294 29 0 0 chrX 106161381 106161416 -60488880 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1394 254 276 125 33 chrX 106161416 106161536 -60488760 - L1M2a LINE L1 -5143 2025 1902 3 1394 4275 71 21 0 chrX 106161828 106162394 -60487902 - L1Md_F2 LINE L1 0 6582 6005 3 1394 891 35 0 17 chrX 106163862 106163977 -60486319 + B1_Mm SINE Alu 34 146 -1 3 1394 535 266 96 4 chrX 106164171 106164431 -60485865 - L1ME2z LINE L1 0 6444 6161 3 1394 571 348 128 31 chrX 106164443 106164853 -60485443 - MLT1E3 LTR MaLR -1 679 231 3 1394 820 260 70 18 chrX 106165080 106165528 -60484768 - L1ME2z LINE L1 -837 5607 5138 3 1394 25 0 0 0 chrX 106165774 106165799 -60484497 + AT_rich Low_complexity Low_complexity 1 25 0 3 1394 1389 62 17 0 chrX 106165809 106165986 -60484310 + B2_Mm2 SINE B2 2 181 -14 3 1394 506 271 159 7 chrX 106167531 106167802 -60482494 + Charlie1b DNA MER1_type 93 404 -119 3 1394 632 174 121 0 chrX 106167904 106168036 -60482260 + B1_Mus1 SINE Alu 1 148 0 3 1394 228 67 0 0 chrX 106168238 106168268 -60482028 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1395 541 186 208 17 chrX 106168403 106168523 -60481773 + B1_Mur1 SINE Alu 1 143 -6 3 1395 21 104 0 0 chrX 106168557 106168634 -60481662 + AT_rich Low_complexity Low_complexity 1 77 0 3 1395 1857 137 47 19 chrX 106168739 106169059 -60481237 + ORR1A4 LTR MaLR 1 329 0 3 1395 1584 16 22 0 chrX 106169862 106170047 -60480249 + B2_Mm1a SINE B2 1 189 -4 3 1395 343 336 174 7 chrX 106170047 106170185 -60480111 + B3A SINE B2 2 162 -36 3 1395 21 36 0 0 chrX 106170359 106170387 -60479909 + AT_rich Low_complexity Low_complexity 1 28 0 3 1395 574 305 101 69 chrX 106171057 106171222 -60479074 - ORR1E LTR MaLR 0 379 187 3 1395 869 97 8 0 chrX 106171222 106171356 -60478940 + (GAAA)n Simple_repeat Simple_repeat 2 136 0 3 1395 574 300 113 80 chrX 106171356 106171541 -60478755 - ORR1E LTR MaLR -173 186 1 3 1395 456 239 38 58 chrX 106171541 106171694 -60478602 - ORR1E-int LTR MaLR -53 1527 1413 3 1395 306 111 67 0 chrX 106171700 106171745 -60478551 - Lx5 LINE L1 -560 6490 6443 3 1395 1854 210 3 0 chrX 106171756 106172080 -60478216 + Lx5 LINE L1 6513 6837 -213 3 1395 304 54 0 67 chrX 106172079 106172139 -60478157 - Lx LINE L1 -4 6650 6595 3 1395 630 262 72 20 chrX 106172137 106172332 -60477964 + Lx5 LINE L1 6843 7047 -3 3 1395 7008 89 29 1 chrX 106172377 106173385 -60476911 + Lx3_Mus LINE L1 5974 7009 0 3 1395 3506 300 58 73 chrX 106173391 106174212 -60476084 - ORR1E-int LTR MaLR -132 1831 583 3 1395 437 228 0 123 chrX 106174212 106174342 -60475954 - PB1D9 SINE Alu -5 115 2 3 1395 3506 306 60 78 chrX 106174342 106174971 -60475325 - ORR1E-int LTR MaLR -998 582 1 3 1395 375 304 61 0 chrX 106174971 106175086 -60475210 - ORR1E LTR MaLR 0 379 258 3 1395 1106 75 0 13 chrX 106175127 106175276 -60475020 + B1_Mus1 SINE Alu 1 147 -1 3 1395 27 0 0 0 chrX 106175276 106175303 -60474993 + AT_rich Low_complexity Low_complexity 1 27 0 3 1395 322 355 50 7 chrX 106175408 106175547 -60474749 - MIRb SINE MIR -51 217 73 3 1395 214 317 56 28 chrX 106176393 106176536 -60473760 + MIRc SINE MIR 2 148 -120 4 1395 240 35 0 0 chrX 106176622 106176651 -60473645 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1395 351 359 19 13 chrX 106177796 106177954 -60472342 + MIR3 SINE MIR 9 167 -41 4 1395 315 348 66 28 chrX 106178860 106179073 -60471223 + L1M3a LINE L1 124 344 -5723 4 1395 745 205 7 20 chrX 106179450 106179599 -60470697 + B1_Mur2 SINE Alu 3 149 0 4 1395 280 300 23 8 chrX 106179986 106180117 -60470179 + L1M3a LINE L1 2192 2324 -3819 4 1395 889 276 0 0 chrX 106180200 106180396 -60469900 + B3 SINE B2 2 197 -19 4 1395 318 307 133 16 chrX 106180422 106180670 -60469626 + L1M3a LINE L1 4154 4430 -1713 4 1395 235 200 16 32 chrX 106180755 106180817 -60469479 - Lx2B LINE L1 -8 6992 6932 4 1395 817 186 0 55 chrX 106180827 106180992 -60469304 - B3 SINE B2 -56 160 5 4 1395 701 230 7 7 chrX 106180999 106181135 -60469161 - B1_Mus1 SINE Alu -1 147 12 4 1395 341 75 0 19 chrX 106181206 106181260 -60469036 - Lx4B LINE L1 -1243 5815 5763 4 1395 416 199 16 46 chrX 106181262 106181393 -60468903 + Lx4B LINE L1 6868 7041 -17 4 1395 285 179 89 49 chrX 106181390 106181513 -60468783 + L1M3a LINE L1 4533 4660 -1483 4 1395 261 352 0 18 chrX 106181586 106181696 -60468600 + PB1D10 SINE Alu 1 108 -9 4 1395 271 259 0 17 chrX 106181760 106181819 -60468477 + ID_B1 SINE B4 90 147 -77 4 1395 277 254 52 0 chrX 106181819 106181851 -60468445 + B1F2 SINE Alu 9 110 -10 4 1395 916 82 0 0 chrX 106182006 106182128 -60468168 + B1_Mus1 SINE Alu 22 143 -5 4 1395 29 0 0 0 chrX 106182133 106182162 -60468134 + AT_rich Low_complexity Low_complexity 1 29 0 4 1395 770 297 26 23 chrX 106182246 106182575 -60467721 + L1M3a LINE L1 5467 5815 -476 4 1395 515 273 85 25 chrX 106182579 106182778 -60467518 + Lx8 LINE L1 7259 7469 -4 4 1395 3024 51 90 3 chrX 106182875 106183340 -60466956 + L1_Mus1 LINE L1 5530 6035 -532 4 1395 809 208 0 0 chrX 106183451 106183595 -60466701 + B1_Mur2 SINE Alu 1 144 -5 4 1395 25 0 0 0 chrX 106183633 106183658 -60466638 + AT_rich Low_complexity Low_complexity 1 25 0 4 1395 957 277 86 44 chrX 106183658 106184157 -60466139 + L1MA8 LINE L1 5491 6010 -281 4 1395 785 168 8 0 chrX 106184217 106184348 -60465948 + B1_Mus2 SINE Alu 16 147 0 4 1395 226 176 20 0 chrX 106184526 106184577 -60465719 + (TTAA)n Simple_repeat Simple_repeat 1 52 0 4 1395 574 306 115 21 chrX 106184660 106185034 -60465262 + L1MD2 LINE L1 5636 6044 -315 4 1395 1664 171 21 126 chrX 106185377 106185799 -60464497 - ORR1C2 LTR MaLR -2 382 5 4 1395 246 275 77 123 chrX 106185985 106186155 -60464141 - MLT1D LTR MaLR 0 467 306 4 1395 269 293 13 13 chrX 106186170 106186246 -60464050 - ID4 SINE ID -6 77 2 4 1395 511 338 113 28 chrX 106186250 106186533 -60463763 - MLT1D LTR MaLR -170 335 29 4 1395 849 245 59 0 chrX 106186754 106186958 -60463338 + B3 SINE B2 1 216 0 4 1395 213 222 0 0 chrX 106187275 106187338 -60462958 + CT-rich Low_complexity Low_complexity 5 67 0 4 1395 1421 276 83 26 chrX 106187817 106188361 -60461935 + L1ME3A LINE L1 5525 6099 -74 4 1395 431 305 113 68 chrX 106189570 106189996 -60460300 - HAL1 LINE L1 -803 1704 1260 4 1395 301 371 70 94 chrX 106190003 106190387 -60459909 - MLT1H1 LTR MaLR -22 533 159 4 1395 242 303 144 7 chrX 106190498 106190651 -60459645 + MLT2C2 LTR ERVL 386 559 0 4 1395 851 217 68 16 chrX 106190929 106191121 -60459175 + B3 SINE B2 2 203 -13 4 1395 23 0 0 0 chrX 106191122 106191145 -60459151 + AT_rich Low_complexity Low_complexity 1 23 0 4 1395 784 271 19 19 chrX 106191329 106191536 -60458760 + B3 SINE B2 3 209 -7 4 1395 28 29 0 0 chrX 106191725 106191760 -60458536 + AT_rich Low_complexity Low_complexity 1 35 0 4 1395 7788 107 70 15 chrX 106191767 106193001 -60457295 + Lx3A LINE L1 5615 6916 -65 4 1395 27 0 0 0 chrX 106193019 106193046 -60457250 + AT_rich Low_complexity Low_complexity 1 27 0 4 1395 291 292 0 0 chrX 106193058 106193123 -60457173 + tRNA-Arg-CGY_ tRNA tRNA 1 65 -11 4 1395 707 309 9 23 chrX 106193123 106193338 -60456958 + B3 SINE B2 1 212 -4 4 1395 3880 126 5 0 chrX 106193518 106194097 -60456199 + MT2B2 LTR ERVL 1 582 -2 4 1395 844 340 10 52 chrX 106194372 106194772 -60455524 - Lx8 LINE L1 -2 7471 7089 4 1395 4381 119 5 1 chrX 106195077 106195734 -60454562 - Lx3C LINE L1 -8 6968 6310 4 1395 4515 94 15 3 chrX 106195734 106196387 -60453909 + Lx3B LINE L1 5654 6314 -659 4 1395 21 36 0 0 chrX 106197828 106197856 -60452440 + AT_rich Low_complexity Low_complexity 1 28 0 4 1395 655 331 46 72 chrX 106197944 106198292 -60452004 + ORR1E LTR MaLR 1 339 -20 4 1395 782 203 71 11 chrX 106198393 106198577 -60451719 - Lx8 LINE L1 -18 7455 7261 4 1395 21 82 0 0 chrX 106199717 106199766 -60450530 + AT_rich Low_complexity Low_complexity 1 49 0 4 1395 277 351 0 36 chrX 106200466 106200732 -60449564 + CT-rich Low_complexity Low_complexity 1 256 0 4 1395 207 376 0 0 chrX 106200928 106201045 -60449251 + CT-rich Low_complexity Low_complexity 3 119 0 4 1395 186 266 0 0 chrX 106201069 106201148 -60449148 + CT-rich Low_complexity Low_complexity 2 80 0 4 1395 301 350 0 16 chrX 106201200 106201383 -60448913 + CT-rich Low_complexity Low_complexity 1 180 0 4 1395 349 301 73 55 chrX 106201771 106201854 -60448442 - PB1D9 SINE Alu 0 120 34 4 1395 2071 143 37 47 chrX 106201854 106202236 -60448060 + ORR1C1 LTR MaLR 1 378 0 4 1395 349 301 73 55 chrX 106202236 106202261 -60448035 - PB1D9 SINE Alu -87 33 10 4 1395 315 0 0 0 chrX 106202274 106202309 -60447987 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1395 501 229 38 0 chrX 106202314 106202419 -60447877 - B1_Mur2 SINE Alu -3 146 38 4 1395 1695 124 0 48 chrX 106202467 106202762 -60447534 - Lx3B LINE L1 -4 6969 6689 4 1395 636 231 20 131 chrX 106202911 106203155 -60447141 + ID_B1 SINE B4 5 221 -3 4 1395 21 57 0 0 chrX 106204104 106204139 -60446157 + AT_rich Low_complexity Low_complexity 1 35 0 4 1395 2572 61 0 0 chrX 106204358 106204688 -60445608 + L1Md_F2 LINE L1 6241 6570 -12 4 1395 1077 134 0 18 chrX 106205019 106205186 -60445110 - U1 snRNA snRNA -1 164 1 4 1395 455 179 158 0 chrX 106205230 106205325 -60444971 - MTD LTR MaLR -92 327 218 4 1395 693 36 0 0 chrX 106206798 106206882 -60443414 + (GAAA)n Simple_repeat Simple_repeat 3 86 0 4 1395 28 0 0 0 chrX 106209571 106209599 -60440697 + AT_rich Low_complexity Low_complexity 1 28 0 4 1395 691 199 38 0 chrX 106209963 106210094 -60440202 + B1_Mur1 SINE Alu 3 138 -11 4 1395 257 0 30 0 chrX 106210246 106210279 -60440017 + (CAAA)n Simple_repeat Simple_repeat 4 37 0 4 1395 549 0 0 0 chrX 106211438 106211499 -60438797 + (TTC)n Simple_repeat Simple_repeat 1 61 0 4 1395 1269 101 0 6 chrX 106211502 106211681 -60438615 - B2_Mm2 SINE B2 -17 178 1 4 1395 505 236 65 0 chrX 106211776 106211899 -60438397 - B1_Mur1 SINE Alu -16 133 3 4 1395 21 82 0 0 chrX 106212916 106212965 -60437331 + AT_rich Low_complexity Low_complexity 1 49 0 4 1395 228 366 8 31 chrX 106212975 106213102 -60437194 - MIR3 SINE MIR -21 187 64 4 1395 310 254 85 72 chrX 106213642 106213671 -60436625 - L1MA7 LINE L1 -21 6270 6245 4 1395 1496 92 41 24 chrX 106213671 106213917 -60436379 - L1_Mus3 LINE L1 -8 6630 6381 4 1395 310 254 85 72 chrX 106213917 106214040 -60436256 - L1MA7 LINE L1 -47 6244 6116 4 1395 1022 79 142 24 chrX 106214279 106214448 -60435848 + B2_Mm2 SINE B2 1 189 -6 4 1395 1340 145 0 0 chrX 106214456 106214772 -60435524 - L1_Mur1 LINE L1 -2491 1421 1106 4 1395 6437 161 31 84 chrX 106214792 106215190 -60435106 - Lx3C LINE L1 -4 6972 6632 4 1395 1086 72 0 0 chrX 106215190 106215329 -60434967 - B1_Mus2 SINE Alu -7 140 2 4 1395 6437 161 31 84 chrX 106215329 106216304 -60433992 - Lx3C LINE L1 -345 6631 5671 4 1395 1648 205 6 12 chrX 106216306 106216627 -60433669 + RLTR16 LTR ERVK 183 501 -4 4 1395 10175 143 35 13 chrX 106216630 106217364 -60432932 - L1VL4 LINE L1 -2141 3745 3013 4 1395 1511 38 32 0 chrX 106217364 106217550 -60432746 - B2_Mm1a SINE B2 0 193 2 4 1395 10175 143 35 13 chrX 106217550 106218694 -60431602 - L1VL4 LINE L1 -2874 3012 1827 4 1395 653 187 0 0 chrX 106218694 106218801 -60431495 - U6 snRNA snRNA 0 107 1 4 1395 1414 170 8 21 chrX 106218801 106219140 -60431156 - L1VL4 LINE L1 -5862 1122 804 4 1395 237 65 0 0 chrX 106219541 106219572 -60430724 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 4 1395 238 115 39 0 chrX 106220017 106220069 -60430227 + (TA)n Simple_repeat Simple_repeat 1 54 0 4 1395 366 340 18 84 chrX 106220185 106220352 -60429944 + B4 SINE B4 13 168 -124 4 1395 273 222 82 14 chrX 106220362 106220435 -60429861 + MTD LTR MaLR 287 364 -55 4 1395 207 195 0 0 chrX 106220477 106220518 -60429778 + GA-rich Low_complexity Low_complexity 1 41 0 4 1395 623 80 0 11 chrX 106220683 106220772 -60429524 - B1_Mur4 SINE Alu -1 149 62 4 1395 483 48 0 0 chrX 106220848 106220910 -60429386 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 1395 464 264 30 37 chrX 106220922 106221056 -60429240 - RSINE1 SINE B4 -26 139 7 4 1395 309 314 153 50 chrX 106221901 106222142 -60428154 - L1M5 LINE L1 -574 5550 5285 4 1395 2752 195 36 6 chrX 106222159 106222686 -60427610 - Lx5 LINE L1 -3 7047 6505 4 1395 327 267 17 0 chrX 106222686 106222806 -60427490 - L1MA4 LINE L1 -3 6297 6176 4 1395 351 0 0 0 chrX 106222806 106222845 -60427451 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1395 2891 264 42 20 chrX 106222859 106223594 -60426702 + RMER1C Other Other 475 1225 -117 4 1395 186 208 0 0 chrX 106223595 106223648 -60426648 + CT-rich Low_complexity Low_complexity 1 53 0 4 1395 457 179 128 22 chrX 106223648 106223791 -60426505 + RMER1C Other Other 1203 1342 0 4 1395 345 244 61 38 chrX 106223797 106223929 -60426367 - L1MA4 LINE L1 -143 6157 6023 4 1395 729 145 48 48 chrX 106223944 106224089 -60426207 + URR1A DNA MER1_type 79 223 -3 4 1395 1134 188 233 60 chrX 106224165 106224482 -60425814 - ORR1D1 LTR MaLR -2 372 1 4 1395 268 250 0 24 chrX 106224482 106224564 -60425732 - L1MA4 LINE L1 -350 5950 5871 4 1395 360 221 60 26 chrX 106224742 106224858 -60425438 - PB1D7 SINE Alu 0 120 1 4 1395 191 326 73 10 chrX 106224986 106225082 -60425214 - MIR SINE MIR -71 137 36 4 1395 281 143 36 0 chrX 106225319 106225375 -60424921 + GA-rich Low_complexity Low_complexity 2 59 0 4 1395 23 54 0 0 chrX 106226140 106226177 -60424119 + AT_rich Low_complexity Low_complexity 1 37 0 5 1395 180 0 0 0 chrX 106226669 106226689 -60423607 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1395 403 198 60 40 chrX 106227523 106227623 -60422673 + B1_Mur1 SINE Alu 46 147 -2 5 1395 554 294 13 20 chrX 106227631 106227780 -60422516 + B1_Mur2 SINE Alu 2 149 0 5 1395 22 0 0 0 chrX 106227798 106227820 -60422476 + AT_rich Low_complexity Low_complexity 1 22 0 5 1395 318 67 0 0 chrX 106228161 106228206 -60422090 + (CAGA)n Simple_repeat Simple_repeat 4 48 0 5 1395 22 0 0 0 chrX 106228230 106228252 -60422044 + GC_rich Low_complexity Low_complexity 1 22 0 5 1395 440 302 9 0 chrX 106228349 106228455 -60421841 + ID_B1 SINE B4 109 215 -9 5 1395 459 78 0 0 chrX 106229008 106229072 -60421224 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 1395 327 49 0 0 chrX 106229072 106229113 -60421183 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1395 692 341 18 49 chrX 106229121 106229405 -60420891 - B4 SINE B4 -13 279 5 5 1395 225 365 0 0 chrX 106229443 106229506 -60420790 + ID4_ SINE ID 6 68 -15 5 1395 741 202 164 23 chrX 106229554 106229731 -60420565 - B3 SINE B2 -13 203 2 5 1395 784 275 68 0 chrX 106230643 106230850 -60419446 - ID_B1 SINE B4 -2 222 2 5 1395 518 303 61 9 chrX 106231041 106231254 -60419042 + MLT1F-int LTR MaLR 1265 1488 -1 5 1395 1176 251 30 15 chrX 106231329 106231665 -60418631 - Lx9 LINE L1 -1565 6079 5739 5 1395 932 209 0 6 chrX 106231666 106231839 -60418457 + Lx9 LINE L1 7182 7353 -291 5 1395 243 354 0 0 chrX 106232000 106232065 -60418231 - ID4_ SINE ID -13 70 6 5 1395 334 324 29 29 chrX 106232081 106232221 -60418075 - B1F1 SINE Alu 0 149 10 5 1395 329 0 24 0 chrX 106232322 106232363 -60417933 + (TATG)n Simple_repeat Simple_repeat 2 43 0 5 1395 451 217 14 155 chrX 106232373 106232580 -60417716 - B3A SINE B2 -18 180 3 5 1395 463 143 0 0 chrX 106232987 106233057 -60417239 + L1Md_T LINE L1 268 337 -6282 5 1395 36163 37 2 1 chrX 106233050 106237976 -60412320 + L1Md_T LINE L1 563 5589 -297 5 1395 8329 37 1 0 chrX 106237977 106238971 -60411325 + L1Md_T LINE L1 5591 6585 0 5 1395 364 40 0 0 chrX 106239092 106239142 -60411154 + L1_Mus1 LINE L1 6516 6565 -2 5 1395 218 301 94 28 chrX 106239996 106240102 -60410194 + L2a LINE L2 3305 3417 -9 5 1395 608 263 82 41 chrX 106240170 106240440 -60409856 + L2 LINE L2 2198 2478 -941 5 1395 306 125 21 0 chrX 106240728 106240773 -60409523 - MTD LTR MaLR -14 405 360 5 1395 439 231 24 109 chrX 106240773 106240938 -60409358 + MTC-int LTR MaLR 1 151 -1107 5 1395 656 247 166 16 chrX 106240930 106241123 -60409173 + MTD LTR MaLR 198 419 0 5 1395 391 332 95 35 chrX 106241285 106241485 -60408811 - MER20 DNA MER1_type -6 213 2 5 1395 441 0 0 0 chrX 106241971 106242020 -60408276 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1395 856 278 10 19 chrX 106242020 106242229 -60408067 + ID_B1 SINE B4 15 221 -3 5 1395 537 108 0 0 chrX 106242743 106242826 -60407470 + L1_Mus2 LINE L1 6484 6566 0 5 1395 371 156 78 0 chrX 106242869 106242946 -60407350 + Lx7 LINE L1 7614 7696 0 5 1395 1390 132 26 4 chrX 106243452 106243680 -60406616 - Lx2 LINE L1 0 6997 6765 5 1395 1765 103 4 19 chrX 106243669 106243927 -60406369 - Lx2 LINE L1 -352 6645 6392 5 1395 604 98 39 10 chrX 106243925 106244028 -60406268 - Lx2 LINE L1 -664 5990 5885 5 1395 293 409 47 77 chrX 106244402 106244807 -60405489 + LTR88c LTR Genie? 9 401 -461 5 1395 654 13 0 0 chrX 106245686 106245761 -60404535 + (TC)n Simple_repeat Simple_repeat 2 76 0 5 1395 189 0 0 0 chrX 106245761 106245781 -60404515 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 1395 510 291 39 23 chrX 106245796 106245926 -60404370 - RSINE1 SINE B4 -26 139 8 5 1395 23 0 0 0 chrX 106246884 106246907 -60403389 + AT_rich Low_complexity Low_complexity 1 23 0 5 1395 252 288 41 33 chrX 106247415 106247537 -60402759 + Lx7 LINE L1 7245 7367 -329 5 1395 353 357 67 0 chrX 106247695 106247877 -60402419 + L1M5 LINE L1 5268 5460 -780 5 1395 38220 9 4 0 chrX 106248168 106253521 -60396775 + L1Md_A LINE L1 208 5586 -297 5 1395 9022 3 0 0 chrX 106253521 106254517 -60395779 + L1Md_A LINE L1 5587 6582 0 5 1395 2061 9 0 0 chrX 106254524 106254755 -60395541 + L1Md_A LINE L1 5356 5586 -297 5 1395 8825 13 0 0 chrX 106254755 106255751 -60394545 + L1Md_A LINE L1 5587 6582 0 5 1395 351 0 0 0 chrX 106256345 106256384 -60393912 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 5 1395 467 333 15 8 chrX 106256883 106257013 -60393283 - RSINE1 SINE B4 0 165 35 5 1395 846 170 78 20 chrX 106257084 106257237 -60393059 + B3 SINE B2 1 163 -53 5 1395 558 67 0 0 chrX 106257237 106257312 -60392984 + (TG)n Simple_repeat Simple_repeat 1 75 0 5 1395 846 170 78 20 chrX 106257312 106257362 -60392934 + B3 SINE B2 164 216 0 5 1395 423 0 0 0 chrX 106257400 106257447 -60392849 + (GA)n Simple_repeat Simple_repeat 1 47 0 5 1395 779 262 48 0 chrX 106257455 106257642 -60392654 + B3 SINE B2 21 216 0 5 1395 27 29 0 0 chrX 106257694 106257728 -60392568 + AT_rich Low_complexity Low_complexity 1 34 0 5 1395 294 331 76 38 chrX 106257732 106257889 -60392407 + MIR SINE MIR 64 226 -36 5 1395 217 327 124 38 chrX 106258102 106258207 -60392089 + PB1D10 SINE Alu 1 114 -3 5 1395 321 47 0 0 chrX 106258224 106258267 -60392029 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 1395 896 237 85 33 chrX 106258705 106258976 -60391320 - L1MC1 LINE L1 -434 5899 5615 5 1395 1331 82 0 0 chrX 106258987 106259169 -60391127 + L1_Mus2 LINE L1 6385 6566 0 5 1395 255 200 0 0 chrX 106259191 106259231 -60391065 - B4A SINE B4 -169 123 84 5 1395 524 280 88 50 chrX 106259233 106259553 -60390743 - L1MC1 LINE L1 -1120 5026 4695 5 1395 504 0 0 0 chrX 106259561 106259617 -60390679 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 1395 373 333 8 41 chrX 106259776 106259898 -60390398 + ID_B1 SINE B4 93 210 -14 5 1395 306 0 0 0 chrX 106259901 106259935 -60390361 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 5 1395 195 42 0 0 chrX 106260049 106260073 -60390223 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1395 246 156 0 0 chrX 106260073 106260118 -60390178 + (TAA)n Simple_repeat Simple_repeat 2 46 0 5 1395 776 172 15 0 chrX 106260134 106260268 -60390028 - B1_Mur4 SINE Alu -13 137 2 5 1395 256 322 122 17 chrX 106260306 106260543 -60389753 - L1MEg LINE L1 -1910 4236 3975 5 1395 7425 121 38 6 chrX 106260557 106261742 -60388554 - Lx3C LINE L1 -2 6974 5752 5 1395 2632 123 7 149 chrX 106261742 106262306 -60387990 + Lx3C LINE L1 5261 5744 -142 5 1395 399 21 0 0 chrX 106262623 106262671 -60387625 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1395 696 296 37 11 chrX 106262862 106263053 -60387243 + ID_B1 SINE B4 4 199 -25 5 1395 404 307 101 35 chrX 106263170 106263369 -60386927 - L1MEg LINE L1 -2456 3690 3479 5 1395 2314 89 3 0 chrX 106263485 106263800 -60386496 + ORR1A2 LTR MaLR 1 316 -11 5 1395 390 269 19 0 chrX 106263797 106263905 -60386391 - B3 SINE B2 -99 117 8 5 1395 306 106 0 0 chrX 106263923 106263970 -60386326 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1395 3412 18 5 0 chrX 106263970 106264361 -60385935 - MTA_Mm LTR MaLR -3 393 1 5 1395 9492 12 11 0 chrX 106264361 106265447 -60384849 - MTA_Mm-int LTR MaLR 0 1098 1 5 1395 3470 15 5 0 chrX 106265447 106265841 -60384455 - MTA_Mm LTR MaLR 0 396 1 5 1395 302 270 60 17 chrX 106265875 106265992 -60384304 - L1MEg LINE L1 -4430 1812 1691 5 1395 696 408 83 0 chrX 106266027 106266375 -60383921 + MLT1G LTR MaLR 196 572 -19 5 1395 304 266 88 71 chrX 106266405 106266587 -60383709 + L1M5 LINE L1 4153 4337 -1809 5 1395 609 291 86 20 chrX 106266638 106266940 -60383356 + L1M5 LINE L1 4696 5017 -1129 5 1395 333 123 0 0 chrX 106267030 106267095 -60383201 + (TCTG)n Simple_repeat Simple_repeat 4 68 0 5 1395 2116 110 25 3 chrX 106267194 106267514 -60382782 + ORR1A2 LTR MaLR 1 327 0 5 1395 2677 59 117 0 chrX 106267519 106267877 -60382419 - MTB LTR MaLR 0 400 1 5 1395 3323 95 4 35 chrX 106267956 106268446 -60381850 - MT2C_Mm LTR ERVL 0 475 1 5 1395 24 0 0 0 chrX 106268451 106268475 -60381821 + AT_rich Low_complexity Low_complexity 1 24 0 5 1395 4113 224 133 31 chrX 106268509 106269052 -60381244 + Lx6 LINE L1 6166 6738 -722 5 1395 1225 111 16 6 chrX 106269052 106269234 -60381062 - B2_Mm2 SINE B2 -10 185 2 5 1395 4113 224 133 31 chrX 106269234 106269849 -60380447 + Lx6 LINE L1 6739 7441 -19 5 1395 1771 77 4 0 chrX 106269850 106270085 -60380211 - L1_Mus1 LINE L1 0 6567 6332 5 1395 204 336 51 70 chrX 106270577 106270734 -60379562 - MIRb SINE MIR -24 244 91 5 1395 2380 150 32 7 chrX 106271008 106271411 -60378885 + MTC LTR MaLR 1 413 -8 5 1395 21 0 0 0 chrX 106271419 106271440 -60378856 + AT_rich Low_complexity Low_complexity 1 21 0 5 1395 261 0 0 0 chrX 106271804 106271833 -60378463 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1395 492 48 0 0 chrX 106272133 106272196 -60378100 + (TG)n Simple_repeat Simple_repeat 1 63 0 5 1395 443 222 111 7 chrX 106272508 106272709 -60377587 + Lx8 LINE L1 5720 5974 -1670 5 1395 629 292 61 69 chrX 106272789 106272809 -60377487 + MTD LTR MaLR 1 20 -387 5 1395 226 0 0 56 chrX 106272809 106272845 -60377451 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1395 1184 252 166 8 chrX 106272845 106273167 -60377129 + MTD LTR MaLR 21 388 -31 5 1395 447 19 0 0 chrX 106273167 106273219 -60377077 + (TC)n Simple_repeat Simple_repeat 1 52 0 5 1395 626 259 185 24 chrX 106273305 106273731 -60376565 + Lx8 LINE L1 6979 7473 0 5 1395 372 59 0 0 chrX 106274026 106274077 -60376219 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 1395 401 302 93 83 chrX 106274102 106274391 -60375905 - B4A SINE B4 0 292 1 5 1395 1387 33 52 47 chrX 106274630 106274821 -60375475 - B2_Mm1a SINE B2 0 193 2 5 1395 738 286 77 49 chrX 106275191 106275478 -60374818 - Lx8 LINE L1 -101 7372 7078 5 1395 911 274 10 55 chrX 106275741 106276034 -60374262 + RMER15 LTR ERVL 294 573 -2 5 1395 4191 298 67 58 chrX 106276053 106276638 -60373658 + RMER15-int LTR ERVL 25 632 -4367 5 1395 1912 177 95 13 chrX 106276638 106277027 -60373269 + MTC LTR MaLR 1 421 0 5 1395 4191 298 67 58 chrX 106277027 106277499 -60372797 + RMER15-int LTR ERVL 633 1093 -3906 5 1395 915 205 14 24 chrX 106277499 106277709 -60372587 - B3 SINE B2 -4 212 5 5 1395 811 220 28 57 chrX 106277709 106277796 -60372500 + RMER15-int LTR ERVL 930 1016 -3983 5 1395 2983 269 40 40 chrX 106277812 106278771 -60371525 + RMER15-int LTR ERVL 1207 2165 -2834 5 1395 6691 60 30 4 chrX 106278771 106279718 -60370578 - RLTR13D5 LTR ERVK 0 1033 1 5 1395 833 207 75 10 chrX 106279718 106279918 -60370378 + RMER15-int LTR ERVL 2160 2372 -2627 5 1395 2318 285 27 25 chrX 106280029 106280854 -60369442 + RMER15-int LTR ERVL 4159 4984 -15 5 1395 1290 296 108 18 chrX 106280883 106281351 -60368945 - Lx8 LINE L1 -783 6690 6204 5 1395 414 0 0 0 chrX 106281351 106281397 -60368899 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1395 1290 296 108 18 chrX 106281397 106281475 -60368821 - Lx8 LINE L1 -1270 6203 6096 5 1395 501 278 0 53 chrX 106281687 106281839 -60368457 + B1_Mur1 SINE Alu 5 148 -1 5 1395 680 268 13 13 chrX 106281860 106282011 -60368285 + RSINE1 SINE B4 5 155 -10 6 1395 21 57 0 0 chrX 106282035 106282070 -60368226 + AT_rich Low_complexity Low_complexity 1 35 0 6 1395 218 100 67 0 chrX 106282111 106282171 -60368125 + A-rich Low_complexity Low_complexity 2 65 0 6 1395 228 338 12 0 chrX 106282195 106282275 -60368021 + Lx8 LINE L1 7224 7304 -169 6 1395 483 290 14 55 chrX 106282275 106282421 -60367875 + B3 SINE B2 47 186 -30 6 1395 915 195 102 5 chrX 106282532 106282728 -60367568 - B3 SINE B2 -1 215 1 6 1395 450 317 0 0 chrX 106282890 106282991 -60367305 + RSINE1 SINE B4 3 103 -62 6 1395 279 0 0 0 chrX 106283036 106283067 -60367229 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1395 24 0 0 0 chrX 106283427 106283451 -60366845 + AT_rich Low_complexity Low_complexity 1 24 0 6 1395 14157 132 24 74 chrX 106283451 106286183 -60364113 - Lx2 LINE L1 0 6997 4314 6 1395 1108 134 40 30 chrX 106286183 106286383 -60363913 - RLTR13D2 LTR ERVK -821 202 1 6 1395 14157 132 24 74 chrX 106286383 106287647 -60362649 - Lx2 LINE L1 0 4313 3071 6 1395 497 136 0 20 chrX 106287619 106287717 -60362579 - MusHAL1 LINE L1 -1397 1315 1220 6 1395 2173 84 108 6 chrX 106287719 106288044 -60362252 + Lx LINE L1 6295 6652 -2 6 1395 258 32 0 0 chrX 106288145 106288176 -60362120 + (TTA)n Simple_repeat Simple_repeat 3 33 0 6 1395 201 196 0 0 chrX 106288198 106288249 -60362047 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 1395 273 355 0 13 chrX 106288256 106288333 -60361963 - RSINE1 SINE B4 -2 163 88 6 1395 1052 126 38 11 chrX 106288334 106288519 -60361777 - B2_Mm2 SINE B2 -3 192 3 6 1395 435 231 132 0 chrX 106288538 106288659 -60361637 - MTD LTR MaLR -277 142 6 6 1395 210 143 0 0 chrX 106289418 106289453 -60360843 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1395 310 320 78 0 chrX 106289890 106289993 -60360303 - B1F SINE Alu 0 120 10 6 1395 240 111 0 0 chrX 106290033 106290069 -60360227 + (T)n Simple_repeat Simple_repeat 1 36 0 6 1395 180 0 0 0 chrX 106291136 106291156 -60359140 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 6 1395 189 0 0 0 chrX 106291391 106291412 -60358884 + (GGGAA)n Simple_repeat Simple_repeat 1 21 0 6 1395 203 170 0 21 chrX 106291542 106291590 -60358706 + CT-rich Low_complexity Low_complexity 3 49 0 6 1395 875 233 46 20 chrX 106293008 106293205 -60357091 - B3 SINE B2 -13 203 2 6 1395 900 147 14 14 chrX 106293456 106293601 -60356695 - B1_Mus1 SINE Alu -1 147 3 6 1395 227 284 62 0 chrX 106293670 106293756 -60356540 - MIR SINE MIR -71 197 92 6 1395 301 330 94 28 chrX 106294067 106294173 -60356123 - PB1D7 SINE Alu -7 113 1 6 1395 221 329 34 68 chrX 106294109 106294197 -60356099 - B4A SINE B4 -143 149 65 6 1395 234 0 0 0 chrX 106294340 106294366 -60355930 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 6 1395 630 154 0 0 chrX 106295123 106295214 -60355082 - 5S rRNA rRNA -30 91 1 6 1395 206 178 0 22 chrX 106295485 106295531 -60354765 + T-rich Low_complexity Low_complexity 1 45 0 6 1395 1160 68 0 20 chrX 106295531 106295681 -60354615 - B1_Mus2 SINE Alu 0 147 1 6 1395 1056 262 37 42 chrX 106295745 106296100 -60354196 - Lx8 LINE L1 -4 7469 7117 6 1395 313 286 45 91 chrX 106296678 106296832 -60353464 - MIRb SINE MIR -58 210 64 6 1395 428 119 30 0 chrX 106296953 106297020 -60353276 + B1_Mur4 SINE Alu 71 139 -11 6 1395 396 59 0 0 chrX 106297020 106297071 -60353225 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 6 1395 242 312 168 35 chrX 106297087 106297230 -60353066 + RSINE1 SINE B4 2 163 -2 6 1395 361 345 0 0 chrX 106297565 106297675 -60352621 + PB1D10 SINE Alu 7 116 -1 6 1395 273 260 49 59 chrX 106298555 106298568 -60351728 - ID_B1 SINE B4 -3 221 121 6 1395 516 184 0 22 chrX 106298568 106298657 -60351639 - B1_Mur2 SINE Alu -23 126 40 6 1395 259 227 9 23 chrX 106298683 106298757 -60351539 - B3 SINE B2 -6 210 101 6 1395 207 212 12 59 chrX 106298824 106298909 -60351387 + (TTATA)n Simple_repeat Simple_repeat 5 85 0 6 1396 782 251 41 0 chrX 106299533 106299704 -60350592 - B3 SINE B2 0 216 39 6 1396 1037 88 0 0 chrX 106299778 106299926 -60350370 - L1_Mus1 LINE L1 -2 6565 6418 6 1396 232 192 70 93 chrX 106300019 106300105 -60350191 - ID_B1 SINE B4 -2 222 139 6 1396 245 264 13 40 chrX 106301064 106301139 -60349157 + B1F1 SINE Alu 74 146 -3 6 1396 507 33 0 0 chrX 106301174 106301235 -60349061 + (TA)n Simple_repeat Simple_repeat 1 61 0 6 1396 213 23 21 83 chrX 106301463 106301511 -60348785 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 6 1396 240 100 0 0 chrX 106302318 106302358 -60347938 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1396 228 360 37 69 chrX 106303397 106303585 -60346711 - L3b LINE CR1 0 482 301 6 1396 249 297 0 26 chrX 106304726 106304802 -60345494 + CT-rich Low_complexity Low_complexity 2 75 0 6 1396 399 248 18 62 chrX 106304881 106304993 -60345303 + B1_Mur2 SINE Alu 42 148 -1 6 1396 324 221 0 0 chrX 106305264 106305341 -60344955 + GA-rich Low_complexity Low_complexity 4 80 0 6 1396 23 0 0 0 chrX 106305615 106305638 -60344658 + AT_rich Low_complexity Low_complexity 1 23 0 6 1396 270 0 0 0 chrX 106305947 106305977 -60344319 + (TCTG)n Simple_repeat Simple_repeat 4 33 0 6 1396 357 314 168 11 chrX 106306268 106306458 -60343838 - RCHARR1 DNA MER1_type -750 224 5 6 1396 369 292 0 48 chrX 106306929 106307055 -60343241 + PB1D7 SINE Alu 1 120 0 6 1396 303 175 0 0 chrX 106307153 106307210 -60343086 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 6 1396 453 301 78 7 chrX 106307511 106307665 -60342631 - RSINE1 SINE B4 0 165 1 6 1396 348 304 72 33 chrX 106308264 106308417 -60341879 - MER113A DNA MER1_type -138 176 18 6 1396 585 245 34 20 chrX 106309762 106309908 -60340388 - B1F SINE Alu 0 149 2 6 1396 219 217 0 0 chrX 106310137 106310197 -60340099 + (TG)n Simple_repeat Simple_repeat 1 60 0 6 1396 811 283 80 33 chrX 106310229 106310503 -60339793 - B4A SINE B4 -1 291 5 6 1396 195 42 0 0 chrX 106310571 106310595 -60339701 + (TTATA)n Simple_repeat Simple_repeat 4 27 0 6 1396 735 320 26 13 chrX 106310618 106310852 -60339444 - 7SK RNA RNA -91 240 4 6 1396 297 89 0 0 chrX 106310938 106310983 -60339313 + (TC)n Simple_repeat Simple_repeat 2 46 0 6 1396 306 0 0 0 chrX 106310983 106311017 -60339279 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1396 628 299 35 22 chrX 106311197 106311426 -60338870 + Lx7 LINE L1 7090 7321 -375 6 1396 308 81 13 39 chrX 106311681 106311758 -60338538 + (CAAAAA)n Simple_repeat Simple_repeat 1 75 0 6 1396 3520 282 73 24 chrX 106311759 106313451 -60336845 - Lx8 LINE L1 -249 7224 5432 6 1396 1060 187 43 0 chrX 106313485 106313672 -60336624 - B3 SINE B2 -5 211 17 6 1396 768 305 16 53 chrX 106313878 106314308 -60335988 + L1_Mur3 LINE L1 5040 5453 -427 6 1396 380 238 12 0 chrX 106314309 106314389 -60335907 + B3 SINE B2 3 83 -133 6 1396 809 324 97 42 chrX 106314467 106314892 -60335404 + MLT1D LTR MaLR 13 460 -45 6 1396 596 259 77 0 chrX 106315017 106315160 -60335136 + B3A SINE B2 1 154 -44 6 1396 258 32 0 0 chrX 106315160 106315191 -60335105 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1396 234 91 0 0 chrX 106315509 106315542 -60334754 + (T)n Simple_repeat Simple_repeat 1 33 0 6 1396 189 147 0 0 chrX 106317247 106317281 -60333015 + (CAAAAA)n Simple_repeat Simple_repeat 1 34 0 6 1396 270 379 63 42 chrX 106317810 106318047 -60332249 - L2a LINE L2 -252 3174 2933 6 1396 267 161 0 0 chrX 106319275 106319331 -60330965 + CT-rich Low_complexity Low_complexity 2 57 0 6 1396 629 280 7 7 chrX 106319675 106319826 -60330470 + MTD LTR MaLR 52 202 -217 6 1396 249 301 32 21 chrX 106319826 106319921 -60330375 - MLT1A0 LTR MaLR 0 365 270 6 1396 514 229 53 8 chrX 106320233 106320365 -60329931 + MTD LTR MaLR 280 417 -2 6 1396 22 0 0 0 chrX 106320632 106320654 -60329642 + AT_rich Low_complexity Low_complexity 1 22 0 6 1396 309 197 0 0 chrX 106320707 106320773 -60329523 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 1396 229 271 94 0 chrX 106321410 106321495 -60328801 + MLT1A1 LTR MaLR 1 93 -315 6 1396 206 255 0 18 chrX 106321584 106321640 -60328656 + CT-rich Low_complexity Low_complexity 3 57 0 6 1396 1442 68 5 10 chrX 106321740 106321934 -60328362 - B2_Mm1t SINE B2 0 193 1 6 1396 282 303 0 10 chrX 106322128 106322228 -60328068 - Charlie23a DNA MER1_type -72 267 169 6 1396 547 148 152 71 chrX 106322508 106322567 -60327729 + Lx9 LINE L1 7414 7476 -168 6 1396 315 0 0 0 chrX 106322567 106322602 -60327694 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1396 547 148 152 71 chrX 106322602 106322753 -60327543 + Lx9 LINE L1 7477 7641 -3 6 1396 199 275 74 12 chrX 106322946 106323027 -60327269 - MIRc SINE MIR -123 145 60 6 1396 339 330 9 54 chrX 106323393 106323505 -60326791 - PB1D10 SINE Alu -9 108 2 6 1396 589 259 20 40 chrX 106323812 106323961 -60326335 - B1_Mur1 SINE Alu -3 146 1 6 1396 1041 0 23 0 chrX 106324024 106324153 -60326143 + (GA)n Simple_repeat Simple_repeat 1 132 0 6 1396 526 296 44 15 chrX 106324160 106324297 -60325999 - RSINE1 SINE B4 -22 143 3 6 1396 589 208 83 15 chrX 106324375 106324507 -60325789 - B1_Mus2 SINE Alu -6 141 1 6 1396 477 281 71 29 chrX 106325242 106325511 -60324785 - L1MA5 LINE L1 -1707 5937 5655 6 1396 293 339 96 50 chrX 106325604 106325719 -60324577 + MIR SINE MIR 1 120 -142 6 1396 367 280 106 0 chrX 106325719 106325851 -60324445 - B1F1 SINE Alu -3 146 1 6 1396 368 278 78 18 chrX 106325851 106325990 -60324306 + MIRb SINE MIR 121 268 0 6 1396 570 98 0 0 chrX 106326686 106326768 -60323528 + (TTTCC)n Simple_repeat Simple_repeat 4 85 0 7 1396 366 23 0 0 chrX 106326769 106326812 -60323484 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 7 1396 1096 81 0 0 chrX 106326812 106326948 -60323348 - B1_Mm SINE Alu -10 137 2 7 1396 492 18 0 0 chrX 106327010 106327067 -60323229 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1396 270 207 0 0 chrX 106327577 106327635 -60322661 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 1396 247 174 0 0 chrX 106327804 106327850 -60322446 + (TGG)n Simple_repeat Simple_repeat 3 48 0 7 1396 22 0 0 0 chrX 106327864 106327886 -60322410 + AT_rich Low_complexity Low_complexity 1 22 0 7 1396 804 337 14 18 chrX 106327969 106328247 -60322049 + Lx8 LINE L1 7052 7328 -145 7 1396 323 300 0 0 chrX 106328420 106328500 -60321796 - ID2 SINE ID 0 83 4 7 1396 319 370 0 32 chrX 106328501 106328518 -60321778 - ID_B1 SINE B4 -24 200 82 7 1396 413 291 57 28 chrX 106328518 106328624 -60321672 - B1F1 SINE Alu -8 109 1 7 1396 3479 74 9 0 chrX 106330566 106331025 -60319271 - Lx3_Mus LINE L1 -8 7001 6539 7 1396 201 94 0 0 chrX 106331294 106331326 -60318970 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 1396 381 225 0 12 chrX 106331596 106331677 -60318619 - ID4 SINE ID -2 81 2 7 1396 351 279 47 41 chrX 106332288 106332432 -60317864 + LTR40b LTR ERVL 90 218 -244 7 1396 351 313 40 0 chrX 106332466 106332565 -60317731 + LTR40b LTR ERVL 417 519 0 7 1396 381 297 27 9 chrX 106333225 106333337 -60316959 - ID_B1 SINE B4 0 224 111 7 1396 363 113 0 0 chrX 106333402 106333464 -60316832 + (TG)n Simple_repeat Simple_repeat 2 63 0 7 1396 1086 80 0 0 chrX 106333929 106334066 -60316230 - B1_Mus1 SINE Alu -9 139 3 7 1396 869 97 0 0 chrX 106335620 106335744 -60314552 - L1_Mus2 LINE L1 -6 6560 6437 7 1396 364 305 37 30 chrX 106336023 106336158 -60314138 - MIRb SINE MIR -87 181 46 7 1396 550 295 108 30 chrX 106336162 106336393 -60313903 - MLT1E1A LTR MaLR 0 680 432 7 1396 469 290 9 0 chrX 106338448 106338555 -60311741 + PB1D10 SINE Alu 8 115 -2 7 1396 232 286 18 18 chrX 106338569 106338626 -60311670 + tRNA-Ala-GCA tRNA tRNA 2 58 -17 7 1396 234 146 21 0 chrX 106338659 106338707 -60311589 + Lx9 LINE L1 7594 7642 -2 7 1396 613 304 6 35 chrX 106338946 106339120 -60311176 + MIRb SINE MIR 92 260 -8 7 1396 26 0 0 0 chrX 106339327 106339353 -60310943 + AT_rich Low_complexity Low_complexity 1 26 0 7 1396 205 102 0 58 chrX 106339531 106339583 -60310713 + T-rich Low_complexity Low_complexity 2 50 0 7 1396 263 267 111 28 chrX 106339699 106339807 -60310489 - PB1 SINE Alu -8 119 3 7 1396 306 0 0 0 chrX 106339879 106339913 -60310383 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1396 404 318 64 0 chrX 106339916 106340026 -60310270 - RSINE1 SINE B4 -43 122 6 7 1396 377 406 6 12 chrX 106340073 106340240 -60310056 + MIRc SINE MIR 3 168 -100 7 1396 685 213 8 142 chrX 106340381 106340627 -60309669 - B3 SINE B2 0 216 4 7 1396 450 0 0 0 chrX 106340759 106340809 -60309487 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 7 1396 459 223 0 80 chrX 106341139 106341251 -60309045 - Lx5 LINE L1 -469 6581 6479 7 1396 1206 276 100 14 chrX 106341307 106341737 -60308559 - Lx5 LINE L1 -701 6349 5883 7 1396 1290 269 79 12 chrX 106341740 106342146 -60308150 + Lx6 LINE L1 7007 7439 -21 7 1396 1205 273 107 18 chrX 106342328 106342893 -60307403 + L1MD3 LINE L1 7314 7927 -68 7 1396 2090 128 87 1 chrX 106342975 106343355 -60306941 - Lx4B LINE L1 -280 6778 6327 7 1396 498 192 143 17 chrX 106345000 106345175 -60305121 - Lx9 LINE L1 -2 7642 7446 7 1396 207 0 0 0 chrX 106345463 106345486 -60304810 + (T)n Simple_repeat Simple_repeat 1 23 0 7 1396 824 230 61 0 chrX 106345869 106346082 -60304214 - L1MA6 LINE L1 -417 5883 5658 7 1396 337 278 61 53 chrX 106346087 106346201 -60304095 - PB1D7 SINE Alu -1 119 5 7 1396 238 241 0 0 chrX 106346201 106346255 -60304041 - L1MA6 LINE L1 -641 5671 5618 7 1396 427 135 0 55 chrX 106346273 106346383 -60303913 + CT-rich Low_complexity Low_complexity 6 109 0 7 1396 781 114 76 0 chrX 106346386 106346517 -60303779 - B1_Mus1 SINE Alu 0 148 8 7 1396 363 44 0 0 chrX 106346522 106346567 -60303729 + (TCC)n Simple_repeat Simple_repeat 3 47 0 7 1396 399 211 0 0 chrX 106346572 106346643 -60303653 - B1_Mur2 SINE Alu -5 144 74 7 1396 821 261 23 26 chrX 106346645 106346955 -60303341 - L1MA6 LINE L1 -685 5615 5307 7 1396 540 333 133 14 chrX 106347074 106347631 -60302665 - L1ME1 LINE L1 -73 6106 5484 7 1396 21 0 0 0 chrX 106347961 106347982 -60302314 + AT_rich Low_complexity Low_complexity 1 21 0 7 1396 292 316 29 0 chrX 106348055 106348194 -60302102 - L1MD LINE L1 -840 5306 5164 7 1396 241 48 71 0 chrX 106348247 106348289 -60302007 + (TTTTA)n Simple_repeat Simple_repeat 3 47 0 7 1396 509 277 92 60 chrX 106348863 106349147 -60301149 - Lx7 LINE L1 -14 7682 7390 7 1396 238 176 0 42 chrX 106349148 106349187 -60301109 + Lx7 LINE L1 7296 7332 -364 7 1396 216 0 0 0 chrX 106349187 106349211 -60301085 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 7 1396 238 176 0 42 chrX 106349211 106349242 -60301054 + Lx7 LINE L1 7333 7363 -333 7 1396 351 250 42 0 chrX 106349371 106349467 -60300829 - PB1D10 SINE Alu 0 117 18 7 1396 1101 65 0 0 chrX 106349805 106349944 -60300352 + B1_Mus1 SINE Alu 5 143 -5 7 1396 524 265 81 0 chrX 106351449 106351585 -60298711 - B1_Mur1 SINE Alu -1 148 2 7 1396 480 30 0 0 chrX 106351699 106351766 -60298530 - L1Md_F2 LINE L1 0 6582 6516 7 1396 385 352 120 20 chrX 106352295 106352495 -60297801 + MER44D DNA MER2_type 19 238 -467 7 1396 314 237 64 56 chrX 106352496 106352621 -60297675 + MER44D DNA MER2_type 469 593 -112 7 1396 25 0 0 0 chrX 106353633 106353658 -60296638 + AT_rich Low_complexity Low_complexity 1 25 0 7 1396 218 207 0 17 chrX 106353683 106353742 -60296554 + (TATATG)n Simple_repeat Simple_repeat 1 58 0 7 1396 423 0 0 0 chrX 106353834 106353881 -60296415 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1396 295 274 0 99 chrX 106353926 106354007 -60296289 - RSINE1 SINE B4 -90 75 3 7 1396 237 310 66 80 chrX 106354011 106354038 -60296258 - RLTR25B LTR ERVK -508 520 452 7 1396 410 185 11 69 chrX 106354038 106354125 -60296171 - B1_Mur3 SINE Alu -48 101 20 7 1396 237 310 66 80 chrX 106354125 106354148 -60296148 - RLTR25B LTR ERVK -508 451 386 7 1396 254 345 172 13 chrX 106354367 106354605 -60295691 - Lx8 LINE L1 -8 7465 7190 7 1396 2066 253 123 29 chrX 106354626 106355290 -60295006 - Lx8 LINE L1 -268 7205 6479 7 1396 558 13 38 0 chrX 106355837 106355916 -60294380 + (GA)n Simple_repeat Simple_repeat 1 82 0 7 1396 415 235 40 20 chrX 106357954 106358054 -60292242 + B3 SINE B2 1 102 -114 7 1396 909 286 96 44 chrX 106358217 106359268 -60291028 - L1MB7 LINE L1 -192 5992 4887 7 1396 479 253 54 54 chrX 106359422 106359627 -60290669 - L1M2 LINE L1 -498 5793 5589 7 1396 1502 124 128 4 chrX 106361463 106361721 -60288575 + Lx2A1 LINE L1 6130 6419 -589 7 1396 531 48 0 35 chrX 106361812 106361898 -60288398 + (TTAGGG)n Simple_repeat Simple_repeat 4 86 0 7 1396 453 307 35 0 chrX 106361949 106362063 -60288233 - RSINE1 SINE B4 -20 145 28 7 1396 567 286 129 29 chrX 106362107 106362316 -60287980 - ORR1D2 LTR MaLR -4 366 137 7 1396 7579 69 4 1 chrX 106362318 106363294 -60287002 - L1_Mus2 LINE L1 0 6566 5588 7 1396 191 61 30 0 chrX 106363312 106363345 -60286951 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 1396 30254 96 7 7 chrX 106363364 106365670 -60284626 - L1Md_F2 LINE L1 0 6582 4196 7 1396 504 48 0 0 chrX 106365670 106365733 -60284563 + (TA)n Simple_repeat Simple_repeat 2 64 0 7 1396 30254 128 12 23 chrX 106365733 106369542 -60280754 - L1Md_F2 LINE L1 -1688 4195 412 7 1396 365 274 130 80 chrX 106369638 106369777 -60280519 - L1MB7 LINE L1 -2250 3890 3723 7 1396 595 268 90 10 chrX 106369777 106369977 -60280319 - B3 SINE B2 0 216 1 7 1396 365 274 130 80 chrX 106369977 106370099 -60280197 - L1MB7 LINE L1 -2418 3722 3616 7 1396 316 316 17 8 chrX 106370131 106370249 -60280047 - L1MB7 LINE L1 -2689 3454 3336 7 1396 2513 246 42 105 chrX 106370264 106371239 -60279057 - RMER17B LTR ERVK -43 915 2 7 1396 616 301 125 53 chrX 106371247 106372177 -60278119 - L1MB7 LINE L1 -2805 3338 2342 7 1396 428 0 19 0 chrX 106372624 106372676 -60277620 + (TTTTA)n Simple_repeat Simple_repeat 3 55 0 7 1396 34956 69 3 2 chrX 106372810 106379045 -60271251 - L1Md_F2 LINE L1 0 6585 250 7 1396 275 72 0 23 chrX 106379667 106379710 -60270586 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1396 722 261 113 9 chrX 106380331 106380544 -60269752 + MER89 LTR ERV1 322 556 -3 7 1396 1025 226 14 24 chrX 106380818 106381027 -60269269 + B3 SINE B2 6 212 -4 7 1396 189 0 0 0 chrX 106381120 106381141 -60269155 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1396 186 309 61 12 chrX 106381189 106381271 -60269025 + MIR SINE MIR 175 260 -2 7 1396 799 251 60 53 chrX 106381291 106381556 -60268740 - Lx9 LINE L1 -469 7175 6909 7 1396 557 264 0 52 chrX 106381556 106381748 -60268548 + Lx9 LINE L1 7292 7473 -171 7 1396 420 344 60 36 chrX 106382699 106382865 -60267431 + B3A SINE B2 2 171 -45 7 1396 354 115 0 0 chrX 106382878 106382939 -60267357 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1396 261 57 0 0 chrX 106382948 106382983 -60267313 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 7 1396 1151 100 41 6 chrX 106383486 106383657 -60266639 + B2_Mm2 SINE B2 1 177 -18 7 1396 222 169 37 49 chrX 106384054 106384135 -60266161 + (TA)n Simple_repeat Simple_repeat 1 80 0 7 1396 208 77 51 0 chrX 106384300 106384339 -60265957 + (TA)n Simple_repeat Simple_repeat 2 42 0 7 1396 285 29 0 0 chrX 106384370 106384404 -60265892 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 1396 205 356 237 0 chrX 106385027 106385162 -60265134 + MER5A DNA MER1_type 1 167 -22 7 1396 543 232 139 5 chrX 106385541 106385749 -60264547 + MER33 DNA MER1_type 89 324 0 7 1396 348 278 72 68 chrX 106387157 106387357 -60262939 - B3A SINE B2 -5 211 5 7 1396 751 275 42 14 chrX 106387519 106387733 -60262563 + ID_B1 SINE B4 3 222 -2 7 1396 619 119 40 0 chrX 106387734 106387860 -60262436 + GA-rich Low_complexity Low_complexity 2 132 0 7 1396 180 372 84 76 chrX 106387970 106388101 -60262195 - L2b LINE L2 -40 3335 3204 7 1396 4000 126 30 8 chrX 106388170 106388796 -60261500 - Lx2B LINE L1 -3 6997 6358 7 1396 3657 46 0 0 chrX 106389984 106390423 -60259873 - L1_Mus1 LINE L1 -1 6566 6128 7 1396 507 107 0 0 chrX 106390437 106390512 -60259784 + (TTA)n Simple_repeat Simple_repeat 2 76 0 8 1396 1093 86 0 0 chrX 106390515 106390655 -60259641 - B1_Mus2 SINE Alu -6 141 2 8 1396 367 238 23 23 chrX 106390675 106390761 -60259535 - RMER20B LTR ERVK -541 86 1 8 1396 288 331 61 8 chrX 106390997 106391128 -60259168 + MIR SINE MIR 13 150 -112 8 1396 692 262 0 39 chrX 106391177 106391332 -60258964 + B1F2 SINE Alu 1 149 0 8 1396 1000 286 0 12 chrX 106391382 106391640 -60258656 + Lx8 LINE L1 6972 7226 -247 8 1396 23 101 0 0 chrX 106391656 106391735 -60258561 + AT_rich Low_complexity Low_complexity 1 79 0 8 1396 487 240 10 0 chrX 106392415 106392519 -60257777 - PB1D10 SINE Alu -12 105 1 8 1396 298 326 92 0 chrX 106392846 106392987 -60257309 - MIRc SINE MIR -30 238 85 8 1396 927 191 51 5 chrX 106396014 106396209 -60254087 + Lx5 LINE L1 6840 7043 -7 8 1396 215 273 0 0 chrX 106396910 106396954 -60253342 - ID4 SINE ID -39 44 1 8 1396 4560 38 7 2 chrX 106397031 106397586 -60252710 - L1Md_F2 LINE L1 -3 6579 6022 8 1396 224 176 15 0 chrX 106398630 106398698 -60251598 + T-rich Low_complexity Low_complexity 2 70 0 8 1396 203 266 31 15 chrX 106398915 106398980 -60251316 - MIR3 SINE MIR -129 79 14 8 1396 240 163 0 0 chrX 106399068 106399111 -60251185 + (CAT)n Simple_repeat Simple_repeat 1 43 0 8 1396 938 172 47 0 chrX 106400022 106400191 -60250105 - ORR1C1 LTR MaLR 0 378 202 8 1396 2476 207 8 64 chrX 106400163 106400773 -60249523 + ORR1B1-int LTR MaLR 6 581 -928 8 1396 586 81 149 0 chrX 106400848 106400935 -60249361 - L1_Mus4 LINE L1 -494 6142 6043 8 1396 3290 87 2 48 chrX 106400936 106401220 -60249076 + L1_Mus4 LINE L1 6158 6439 -197 8 1396 2787 76 49 0 chrX 106401220 106401590 -60248706 - RLTR10 LTR ERVK -2 388 1 8 1396 3290 87 2 48 chrX 106401590 106401801 -60248495 + L1_Mus4 LINE L1 6440 6630 -6 8 1396 445 344 54 5 chrX 106401891 106402075 -60248221 - MLT1A LTR MaLR 0 374 182 8 1396 198 0 0 0 chrX 106402096 106402118 -60248178 + (TG)n Simple_repeat Simple_repeat 1 22 0 8 1396 459 0 0 0 chrX 106402119 106402170 -60248126 + (TTTC)n Simple_repeat Simple_repeat 4 54 0 8 1396 2742 64 33 3 chrX 106402173 106402536 -60247760 - L1Md_F2 LINE L1 -15 6567 6194 8 1396 484 81 126 0 chrX 106402533 106402620 -60247676 + L1Md_F2 LINE L1 6481 6578 -4 8 1396 1239 268 45 30 chrX 106402621 106403222 -60247074 + L1M2 LINE L1 4346 4955 -1188 8 1396 342 0 0 0 chrX 106403326 106403364 -60246932 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 1396 13617 96 33 26 chrX 106403634 106405219 -60245077 + L1VL4 LINE L1 54 1849 -1710 8 1396 2255 83 174 0 chrX 106405219 106405569 -60244727 + IAPLTR2a LTR ERVK 1 411 0 8 1396 13617 83 45 36 chrX 106405569 106406012 -60244284 + L1VL4 LINE L1 1850 2291 -1268 8 1396 3022 67 15 0 chrX 106406012 106406402 -60243894 + MTA_Mm LTR MaLR 1 396 0 8 1396 13617 83 45 36 chrX 106406402 106406758 -60243538 + L1VL4 LINE L1 2292 2649 -910 8 1396 1199 43 0 0 chrX 106406758 106406899 -60243397 + B1_Mm SINE Alu 1 141 -6 8 1396 13617 83 45 36 chrX 106406899 106407411 -60242885 + L1VL4 LINE L1 2650 3106 -453 8 1396 360 216 0 0 chrX 106407412 106407486 -60242810 + L1_Mur1 LINE L1 5211 5284 -602 8 1396 1080 63 0 2 chrX 106407468 106407612 -60242684 + L1Md_F2 LINE L1 5461 5615 -718 8 1396 8020 52 1 0 chrX 106407612 106408595 -60241701 + L1Md_F2 LINE L1 5587 6570 -12 8 1396 6558 149 15 5 chrX 106408607 106409954 -60240342 + Lx LINE L1 5288 6652 -2 8 1396 657 85 0 0 chrX 106409968 106410074 -60240222 + (CA)n Simple_repeat Simple_repeat 1 106 0 8 1396 2213 112 20 23 chrX 106410076 106410425 -60239871 + Lx3A LINE L1 6615 6962 -19 8 1396 261 0 0 0 chrX 106410430 106410459 -60239837 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 8 1396 351 0 0 0 chrX 106410485 106410524 -60239772 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1396 31614 82 15 2 chrX 106410662 106415789 -60234507 + L1Md_F2 LINE L1 392 5586 -297 8 1396 7602 62 10 2 chrX 106415789 106416765 -60233531 + L1Md_F2 LINE L1 5587 6570 -12 8 1396 542 281 134 6 chrX 106416948 106417127 -60233169 - ID_B1 SINE B4 -3 221 20 8 1396 30 69 0 0 chrX 106417423 106417481 -60232815 + AT_rich Low_complexity Low_complexity 1 58 0 8 1396 1076 238 5 5 chrX 106417563 106417774 -60232522 + Lx6 LINE L1 6908 7118 -342 8 1396 342 0 0 0 chrX 106417777 106417815 -60232481 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 1396 417 121 36 0 chrX 106417820 106417903 -60232393 + (TA)n Simple_repeat Simple_repeat 2 87 0 8 1396 240 35 0 0 chrX 106417904 106417933 -60232363 + (GA)n Simple_repeat Simple_repeat 1 29 0 8 1396 2665 143 9 138 chrX 106417945 106418577 -60231719 + RMER6A LTR ERVK 206 756 0 8 1396 242 205 21 74 chrX 106419014 106419109 -60231187 - L1MA7 LINE L1 -1 6290 6201 8 1396 461 222 87 9 chrX 106419217 106419367 -60230929 + MTD LTR MaLR 256 420 -1 8 1396 721 327 38 98 chrX 106419630 106420414 -60229882 - L1M4 LINE L1 -5773 769 33 8 1396 7066 46 1 1 chrX 106420564 106421441 -60228855 + L1Md_F3 LINE L1 4710 5586 -297 8 1396 8105 43 0 0 chrX 106421441 106422423 -60227873 + L1Md_F3 LINE L1 5587 6568 -16 8 1396 1608 180 34 92 chrX 106422538 106422912 -60227384 - ORR1B1 LTR MaLR 0 394 43 8 1396 835 140 133 6 chrX 106422912 106423070 -60227226 - ORR1B1-int LTR MaLR -2 1961 1784 8 1396 420 187 38 81 chrX 106423075 106423261 -60227035 - RMER17C LTR ERVK -136 274 97 8 1396 6078 158 65 50 chrX 106423255 106424681 -60225615 - ORR1B1-int LTR MaLR -201 1762 481 8 1396 2025 244 61 110 chrX 106424681 106425460 -60224836 + RMER17B LTR ERVK 1 700 -258 8 1396 3257 76 0 9 chrX 106425460 106425899 -60224397 + L1Md_F2 LINE L1 6140 6574 -8 8 1396 915 10 0 0 chrX 106425908 106426012 -60224284 + (GAA)n Simple_repeat Simple_repeat 2 105 0 8 1396 2025 241 52 113 chrX 106426012 106426250 -60224046 + RMER17B LTR ERVK 707 937 -21 8 1396 2563 179 21 6 chrX 106426240 106426718 -60223578 - ORR1B1-int LTR MaLR -1478 485 1 8 1396 1614 199 13 10 chrX 106426718 106427028 -60223268 - ORR1B1 LTR MaLR 0 394 84 8 1396 1555 214 51 206 chrX 106427478 106428201 -60222095 + RMER19C LTR ERVK 1 611 0 8 1396 2821 62 0 3 chrX 106428626 106428983 -60221313 - L1_Mus1 LINE L1 -3 6564 6209 8 1396 936 287 138 10 chrX 106429255 106429755 -60220541 - Lx7 LINE L1 -31 7665 7102 8 1396 2390 60 0 0 chrX 106429930 106430230 -60220066 + L1_Mus1 LINE L1 6268 6567 0 8 1396 184 77 0 49 chrX 106430246 106430287 -60220009 + (CAAAAA)n Simple_repeat Simple_repeat 5 43 0 8 174 685 294 71 0 chrX 106430287 106430471 -60219825 + B4A SINE B4 28 224 -68 8 1397 461 292 165 40 chrX 106430640 106430961 -60219335 + RMER20B LTR ERVK 205 565 -62 8 1397 285 293 0 0 chrX 106431159 106431217 -60219079 + B4A SINE B4 227 284 -8 8 1397 304 323 10 39 chrX 106431247 106431350 -60218946 + B4A SINE B4 188 287 -5 8 1397 3261 21 39 0 chrX 106431432 106431813 -60218483 + MTA_Mm LTR MaLR 1 396 0 8 1397 5385 44 1 0 chrX 106431974 106432632 -60217664 - L1Md_F2 LINE L1 0 6582 5924 8 1397 363 96 0 0 chrX 106433925 106433977 -60216319 + (T)n Simple_repeat Simple_repeat 1 52 0 8 1397 645 14 0 0 chrX 106434483 106434557 -60215739 + (GA)n Simple_repeat Simple_repeat 1 74 0 8 1397 947 201 9 69 chrX 106434570 106434822 -60215474 - Lx2B LINE L1 -18 6982 6539 8 1397 236 260 87 39 chrX 106434896 106435000 -60215296 - LTR83 LTR ERVL -142 638 530 8 1397 2249 166 24 5 chrX 106435235 106435617 -60214679 - ORR1B1 LTR MaLR -5 389 1 8 1397 1423 281 77 16 chrX 106436018 106436445 -60213851 + Lx8 LINE L1 6854 7306 -167 8 1397 339 239 0 43 chrX 106436454 106436546 -60213750 + Lx7 LINE L1 5657 5744 -1952 8 1397 398 43 0 0 chrX 106436544 106436590 -60213706 + L1Md_F2 LINE L1 5540 5585 -298 8 1397 7612 57 23 2 chrX 106436591 106437488 -60212808 + L1Md_F2 LINE L1 5587 6481 -101 8 1397 183 80 0 0 chrX 106437488 106437513 -60212783 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 8 1397 7612 57 23 2 chrX 106437513 106437584 -60212712 + L1Md_F2 LINE L1 6482 6573 -9 8 1397 327 221 17 133 chrX 106437644 106437764 -60212532 + MT2B LTR ERVL 152 257 -344 8 1397 926 98 0 43 chrX 106437660 106437799 -60212497 + B1_Mus1 SINE Alu 6 138 -10 8 1397 221 0 0 33 chrX 106437799 106437829 -60212467 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8 1397 2051 293 93 25 chrX 106438177 106439036 -60211260 + Lx8 LINE L1 6096 7188 -285 8 1397 303 228 17 34 chrX 106439287 106439346 -60210950 + PB1D9 SINE Alu 2 59 -61 8 1397 308 161 0 0 chrX 106439346 106439408 -60210888 + GA-rich Low_complexity Low_complexity 1 62 0 8 1397 281 191 0 0 chrX 106439410 106439457 -60210839 + B1_Mur4 SINE Alu 43 89 -61 8 1397 1186 214 201 91 chrX 106439499 106439926 -60210370 + RMER15 LTR ERVL 1 474 -101 8 1397 824 294 42 38 chrX 106439914 106440154 -60210142 + MTE2b LTR MaLR 139 379 0 8 1397 301 325 37 12 chrX 106440439 106440520 -60209776 + B1F2 SINE Alu 1 83 -66 8 1397 215 93 0 23 chrX 106440520 106440564 -60209732 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 8 1397 1326 300 109 31 chrX 106440674 106442012 -60208284 - L1M2 LINE L1 -1994 4149 2707 8 1397 609 14 0 0 chrX 106442119 106442189 -60208107 + (TTC)n Simple_repeat Simple_repeat 3 72 0 8 1397 209 33 33 0 chrX 106442189 106442219 -60208077 + (TC)n Simple_repeat Simple_repeat 1 31 0 8 1397 180 111 0 0 chrX 106442219 106442246 -60208050 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 1397 486 355 51 75 chrX 106442293 106442530 -60207766 - B4A SINE B4 -2 290 65 8 1397 627 281 97 15 chrX 106442530 106442725 -60207571 + B3 SINE B2 1 211 -5 8 1397 486 355 51 75 chrX 106442725 106442782 -60207514 - B4A SINE B4 -228 64 3 8 1397 449 320 61 11 chrX 106443326 106443506 -60206790 - RMER20B LTR ERVK -205 422 234 8 1397 318 290 49 12 chrX 106443883 106444047 -60206249 - L1MA4 LINE L1 -393 5907 5738 8 1397 2738 63 94 0 chrX 106444518 106444880 -60205416 - MTA_Mm LTR MaLR 0 396 1 8 1397 236 239 27 38 chrX 106445210 106445297 -60204999 + MTEb LTR MaLR 278 364 -15 8 1397 261 299 35 41 chrX 106445500 106445671 -60204625 - L1MA4A LINE L1 -361 5942 5773 8 1397 7513 65 4 3 chrX 106445680 106447335 -60202961 - L1Md_F2 LINE L1 0 6582 4929 8 1397 1458 32 5 0 chrX 106447322 106447510 -60202786 - L1Md_F2 LINE L1 -500 5383 5195 8 1397 6360 53 1 12 chrX 106447719 106448523 -60201773 + L1Md_F2 LINE L1 5778 6572 -10 8 1397 294 277 126 11 chrX 106448663 106448758 -60201538 + ID_B1 SINE B4 91 196 -28 8 1397 296 268 56 104 chrX 106448831 106448956 -60201340 + PB1D7 SINE Alu 1 119 -1 8 1397 3863 167 32 21 chrX 106450329 106451088 -60199208 + Lx4B LINE L1 6272 7038 -20 8 1397 252 0 0 0 chrX 106451088 106451116 -60199180 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 8 1397 608 98 0 0 chrX 106451492 106451574 -60198722 - B2_Mm2 SINE B2 -109 86 5 9 1397 11369 86 19 14 chrX 106451574 106452538 -60197758 + Lx3A LINE L1 4136 5112 -774 9 1397 2987 55 13 0 chrX 106452538 106452919 -60197377 + L1Md_F2 LINE L1 6197 6582 0 9 1397 11369 101 35 16 chrX 106452919 106454753 -60195543 + Lx3A LINE L1 5113 6978 -3 9 1397 375 23 0 0 chrX 106454753 106454797 -60195499 + (TAA)n Simple_repeat Simple_repeat 2 45 0 9 1397 28 0 0 0 chrX 106454908 106454936 -60195360 + AT_rich Low_complexity Low_complexity 1 28 0 9 1397 190 308 15 15 chrX 106454955 106455021 -60195275 - L2a LINE L2 0 3426 3361 9 1397 207 0 0 0 chrX 106455744 106455767 -60194529 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 1397 628 282 21 0 chrX 106455839 106455981 -60194315 - RSINE1 SINE B4 -17 148 4 9 1397 4123 87 3 6 chrX 106456087 106456669 -60193627 - MTA_Mm-int LTR MaLR -162 1096 381 9 1397 6538 58 0 8 chrX 106456669 106457492 -60192804 - L1Md_F2 LINE L1 0 6582 5767 9 1397 3440 169 70 163 chrX 106457492 106458117 -60192179 - MTA_Mm-int LTR MaLR -752 506 3 9 1397 3387 35 2 0 chrX 106458117 106458512 -60191784 - MTA_Mm LTR MaLR 0 396 1 9 1397 1056 187 196 16 chrX 106458586 106458836 -60191460 - MTD LTR MaLR 0 419 125 9 1397 423 283 0 9 chrX 106459616 106459723 -60190573 - MTD LTR MaLR -299 120 15 9 1397 22 35 0 0 chrX 106459813 106459842 -60190454 + AT_rich Low_complexity Low_complexity 1 29 0 9 1397 4452 14 0 0 chrX 106460470 106460963 -60189333 + MT2_Mm LTR ERVL 1 493 0 9 1397 38782 15 14 0 chrX 106460963 106466250 -60184046 + MERVL-int LTR ERVL 1 5360 -125 9 1397 390 167 46 35 chrX 106466250 106466337 -60183959 + ORR1A3-int LTR MaLR 553 640 -1323 9 1397 302 0 0 0 chrX 106466337 106466375 -60183921 + MERVL-int LTR ERVL 5448 5485 0 9 1397 4452 14 0 0 chrX 106466375 106466868 -60183428 + MT2_Mm LTR ERVL 1 493 0 9 1397 22 35 0 0 chrX 106466898 106466927 -60183369 + AT_rich Low_complexity Low_complexity 1 29 0 9 1397 3187 41 13 0 chrX 106467856 106468245 -60182051 + L1Md_T LINE L1 6189 6582 0 9 1397 447 35 0 0 chrX 106468833 106468890 -60181406 + (TCTA)n Simple_repeat Simple_repeat 3 59 0 9 1397 21 0 0 0 chrX 106469001 106469022 -60181274 + AT_rich Low_complexity Low_complexity 1 21 0 9 1397 260 176 0 14 chrX 106469299 106469368 -60180928 + (TG)n Simple_repeat Simple_repeat 1 68 0 9 1397 481 301 54 66 chrX 106469368 106469535 -60180761 - RSINE1 SINE B4 0 165 1 9 1397 6898 85 10 0 chrX 106470492 106471796 -60178500 - L1_Mus1 LINE L1 0 6567 5252 9 1397 4121 65 2 0 chrX 106471922 106472448 -60177848 - L1Md_F2 LINE L1 -2 6580 6054 9 1397 7725 56 0 0 chrX 106472448 106473479 -60176817 + L1_Mm LINE L1 3493 4523 -1360 9 1397 12953 81 4 4 chrX 106473480 106475368 -60174928 - L1_Mus1 LINE L1 -616 5267 3380 9 1397 186 43 0 0 chrX 106475841 106475864 -60174432 + (T)n Simple_repeat Simple_repeat 1 23 0 9 1397 15470 4 0 0 chrX 106475867 106478388 -60171908 - L1Md_A LINE L1 0 6582 4061 9 1397 11116 22 1 6 chrX 106478383 106481277 -60169019 - L1Md_A LINE L1 -4024 1859 1 9 1397 15019 100 5 9 chrX 106481277 106484252 -60166044 - L1_Mus1 LINE L1 -2494 3389 217 9 1397 904 84 21 0 chrX 106484260 106484402 -60165894 + MTA_Mm-int LTR MaLR 954 1098 0 9 1397 3334 45 0 0 chrX 106484402 106484798 -60165498 + MTA_Mm LTR MaLR 1 396 0 9 1397 554 259 131 39 chrX 106484806 106485035 -60165261 - Lx6 LINE L1 -3 7457 7208 9 1397 388 319 36 71 chrX 106485234 106485272 -60165024 - B3A SINE B2 0 198 10 9 1397 695 244 19 38 chrX 106485272 106485430 -60164866 - RSINE1 SINE B4 0 165 11 9 1397 309 295 202 16 chrX 106486391 106486515 -60163781 - B1F SINE Alu 0 149 3 9 1397 355 333 28 0 chrX 106487171 106487315 -60162981 + B1F SINE Alu 1 148 -1 9 1397 22 35 0 0 chrX 106487369 106487398 -60162898 + AT_rich Low_complexity Low_complexity 1 29 0 9 1397 231 159 68 0 chrX 106487615 106487659 -60162637 + L4 LINE RTE 1721 1767 -262 9 1397 543 280 0 15 chrX 106487883 106488017 -60162279 - ID_B1 SINE B4 -7 217 86 9 1397 245 200 0 0 chrX 106488035 106488085 -60162211 + L1VL2 LINE L1 519 568 -5767 9 1397 226 226 63 16 chrX 106488237 106488300 -60161996 + L1VL2 LINE L1 521 586 -5749 9 1397 20886 162 64 14 chrX 106488439 106494395 -60155901 + Lx2B LINE L1 743 6999 -1 9 1397 368 359 10 0 chrX 106494395 106494498 -60155798 - ID_B1 SINE B4 -117 107 4 9 1397 187 254 102 0 chrX 106494752 106494811 -60155485 - MIR3 SINE MIR -28 180 116 9 1397 7643 63 3 1 chrX 106494907 106495928 -60154368 - L1_Mus3 LINE L1 0 6638 5616 9 1397 3476 155 84 5 chrX 106496022 106496652 -60153644 - Lx2 LINE L1 0 6997 6318 9 1397 11284 174 26 6 chrX 106496652 106499035 -60151261 - L1_Mur2 LINE L1 -819 5058 2628 9 1397 7144 67 16 2 chrX 106499021 106499991 -60150305 - L1Md_F2 LINE L1 -12 6570 5587 9 1397 8471 76 5 0 chrX 106500000 106501177 -60149119 - L1_Mm LINE L1 -306 5577 4395 1 1397 694 117 17 0 chrX 106501238 106501358 -60148938 + L1_Mur1 LINE L1 2537 2658 -3228 2 1397 4158 209 43 4 chrX 106501356 106502600 -60147696 + L1Md_A LINE L1 1 1086 -5638 3 1397 30852 81 3 7 chrX 106502597 106507700 -60142596 + L1Md_F2 LINE L1 507 5586 -297 4 1397 7847 58 9 0 chrX 106507700 106508687 -60141609 + L1Md_F2 LINE L1 5587 6582 0 4 1397 6597 153 41 50 chrX 106509029 106511352 -60138944 - L1VL4 LINE L1 -3024 2859 561 5 1397 377 296 156 11 chrX 106511354 106511828 -60138468 - L1_Rod LINE L1 -3637 2210 1668 6 1397 610 192 263 23 chrX 106512114 106512285 -60138011 + B3 SINE B2 1 212 -4 7 1397 22 0 0 0 chrX 106512295 106512317 -60137979 + AT_rich Low_complexity Low_complexity 1 22 0 8 1397 288 137 0 0 chrX 106513628 106513679 -60136617 + (TA)n Simple_repeat Simple_repeat 1 51 0 9 1397 27 0 0 0 chrX 106513683 106513710 -60136586 + AT_rich Low_complexity Low_complexity 1 27 0 1 1397 205 318 106 26 chrX 106513763 106513876 -60136420 + MIR SINE MIR 6 127 -135 1 1397 349 340 19 0 chrX 106514008 106514114 -60136182 + RSINE1 SINE B4 57 164 -1 1 1397 252 119 16 33 chrX 106514828 106514889 -60135407 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 1397 401 66 16 0 chrX 106515437 106515498 -60134798 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 1397 782 108 0 9 chrX 106515683 106515795 -60134501 + B1_Mm SINE Alu 32 142 -5 1 1397 183 80 0 0 chrX 106515829 106515854 -60134442 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1397 23 33 0 0 chrX 106516003 106516033 -60134263 + AT_rich Low_complexity Low_complexity 1 30 0 1 1397 234 0 0 0 chrX 106516568 106516594 -60133702 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1 1397 433 238 12 0 chrX 106516603 106516687 -60133609 - B1_Mus1 SINE Alu -59 89 5 1 1397 225 310 35 0 chrX 106516635 106516693 -60133603 - B4A SINE B4 -152 140 81 2 1397 2153 214 55 14 chrX 106517450 106517962 -60132334 - RMER16 LTR ERVK 0 533 1 2 1397 4331 35 0 0 chrX 106518441 106518949 -60131347 + L1Md_T LINE L1 6075 6582 0 2 1397 555 66 0 0 chrX 106519544 106519620 -60130676 + (TA)n Simple_repeat Simple_repeat 2 77 0 2 1397 299 189 62 49 chrX 106520273 106520367 -60129929 - ORR1A2 LTR MaLR -8 370 251 2 1397 6565 92 5 2 chrX 106520367 106521790 -60128506 - L1_Mus2 LINE L1 -40 6526 5099 2 1397 1706 164 17 3 chrX 106521790 106522078 -60128218 - ORR1A2 LTR MaLR -35 292 1 2 1397 13995 116 35 9 chrX 106522630 106526033 -60124263 - L1Md_F2 LINE L1 -10 6572 2855 2 1397 32511 77 2 6 chrX 106526057 106532170 -60118126 - L1Md_F2 LINE L1 0 6585 401 2 1397 5936 94 2 1 chrX 106532177 106533071 -60117225 - L1Md_F2 LINE L1 -3017 2866 1972 2 1397 4783 119 106 0 chrX 106534950 106535687 -60114609 + Lx2 LINE L1 6183 6997 0 2 1397 201 192 19 0 chrX 106535715 106535767 -60114529 + T-rich Low_complexity Low_complexity 4 56 0 2 1397 426 65 0 0 chrX 106539541 106539603 -60110693 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 1397 1377 209 53 0 chrX 106540499 106540762 -60109534 - RLTR25A LTR ERVK -826 277 1 3 1397 564 171 171 0 chrX 106540762 106540926 -60109370 + Lx9 LINE L1 7406 7597 -47 3 1397 2051 62 0 0 chrX 106541041 106541329 -60108967 + L1Md_T LINE L1 6323 6582 0 3 1397 401 0 20 0 chrX 106541455 106541504 -60108792 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 3 1397 26141 117 9 17 chrX 106542555 106542919 -60107377 - L1VL1 LINE L1 -269 5614 5233 3 1397 468 0 0 0 chrX 106542919 106542971 -60107325 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1397 26141 121 9 25 chrX 106542971 106547898 -60102398 - L1VL1 LINE L1 -651 5232 410 3 1397 326 289 185 38 chrX 106548125 106548492 -60101804 - L1MC4 LINE L1 -165 7877 7457 3 1397 24 0 0 0 chrX 106549042 106549066 -60101230 + AT_rich Low_complexity Low_complexity 1 24 0 3 1397 24 0 0 0 chrX 106549752 106549776 -60100520 + AT_rich Low_complexity Low_complexity 1 24 0 3 1397 216 345 0 17 chrX 106549832 106549891 -60100405 - ID SINE ID -153 71 14 4 1397 21 0 0 0 chrX 106551063 106551084 -60099212 + AT_rich Low_complexity Low_complexity 1 21 0 4 1397 411 21 0 0 chrX 106551565 106551613 -60098683 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1397 1108 222 171 146 chrX 106552277 106552716 -60097580 + MT2B LTR ERVL 3 531 -70 4 1397 645 14 0 0 chrX 106552716 106552790 -60097506 + (GA)n Simple_repeat Simple_repeat 1 74 0 4 1397 962 238 94 100 chrX 106552790 106552835 -60097461 + MT2B LTR ERVL 527 583 -1 4 1397 247 241 60 12 chrX 106553416 106553500 -60096796 + RMER15 LTR ERVL 423 510 -65 4 1397 816 57 0 0 chrX 106553887 106553993 -60096303 + (TG)n Simple_repeat Simple_repeat 2 107 0 4 1397 607 253 20 99 chrX 106554171 106554373 -60095923 - RLTR28 LTR ERVL -338 186 1 4 1397 28 29 0 0 chrX 106555065 106555100 -60095196 + AT_rich Low_complexity Low_complexity 1 35 0 4 1397 5006 81 11 0 chrX 106555184 106555850 -60094446 - L1_Mus1 LINE L1 0 6567 5895 4 1397 2461 60 0 0 chrX 106555850 106556183 -60094113 + L1_Mus1 LINE L1 5623 5955 -611 4 1397 186 392 37 37 chrX 106556779 106556967 -60093329 - MIRb SINE MIR 0 268 81 5 1397 13934 20 1 0 chrX 106557484 106559180 -60091116 + L1Md_T LINE L1 3889 5586 -297 5 1397 8072 53 0 0 chrX 106559180 106560174 -60090122 + L1Md_T LINE L1 5587 6580 -2 5 1397 4544 13 0 0 chrX 106560174 106560721 -60089575 + L1_Mm LINE L1 3974 4520 -1363 5 1397 607 286 49 54 chrX 106560969 106561172 -60089124 + B3 SINE B2 3 204 -12 5 174 798 304 51 13 chrX 106561418 106561734 -60088562 + Lx8 LINE L1 7008 7335 -138 5 1398 29 60 0 0 chrX 106561734 106561784 -60088512 + AT_rich Low_complexity Low_complexity 1 50 0 5 1398 371 303 49 24 chrX 106562199 106562446 -60087850 - L1MA4 LINE L1 -362 5938 5686 5 1398 225 362 26 13 chrX 106562744 106562898 -60087398 - L1MB4 LINE L1 -6353 254 99 5 1398 274 319 92 7 chrX 106563033 106563339 -60086957 - L1M5 LINE L1 -1622 4524 4193 5 1398 316 312 53 18 chrX 106563376 106563490 -60086806 - L1MC LINE L1 -2757 3389 3272 5 1398 808 276 30 45 chrX 106563495 106563764 -60086532 - Lx8 LINE L1 -357 7116 6852 6 1398 3013 155 8 0 chrX 106563853 106564364 -60085932 - L1_Mur1 LINE L1 -136 5750 5236 6 1398 36068 31 0 0 chrX 106564367 106570559 -60079737 - L1Md_T LINE L1 0 6585 297 6 1398 3962 152 4 3 chrX 106570543 106571257 -60079039 - L1_Mur1 LINE L1 -623 5263 4549 6 1398 5028 170 47 25 chrX 106571258 106572319 -60077977 + Lx3C LINE L1 5892 6976 0 6 1398 3052 192 13 4 chrX 106572431 106573112 -60077184 + L1Md_A LINE L1 450 1136 -5588 6 1398 927 33 0 24 chrX 106573112 106573236 -60077060 + B1_Mm SINE Alu 27 147 0 6 1398 19382 96 3 38 chrX 106573251 106576745 -60073551 + L1Md_A LINE L1 1105 4322 -1564 6 1398 8436 35 0 0 chrX 106576745 106577741 -60072555 + L1Md_T LINE L1 5587 6582 0 6 1398 14191 176 4 206 chrX 106577741 106578101 -60072195 + L1Md_A LINE L1 4323 4495 -1391 6 1398 1047 269 8 4 chrX 106578101 106578336 -60071960 + MTD LTR MaLR 14 249 -170 6 1398 14191 176 4 206 chrX 106578336 106578354 -60071942 + L1Md_A LINE L1 4496 4504 -1382 6 1398 5657 102 0 9 chrX 106578354 106579164 -60071132 - L1_Mus4 LINE L1 0 6636 5834 6 1398 14191 176 4 206 chrX 106579164 106580267 -60070029 + L1Md_A LINE L1 4505 5411 -475 6 1398 461 276 17 58 chrX 106580267 106580440 -60069856 + RNLTR23 LTR ERVK 477 642 0 6 1398 14191 176 4 206 chrX 106580440 106580949 -60069347 + L1Md_A LINE L1 5412 5831 -55 6 1398 4379 164 43 11 chrX 106580949 106581744 -60068552 - Lx2B LINE L1 0 7000 6181 7 1398 1248 147 0 5 chrX 106581758 106581970 -60068326 - Lx2 LINE L1 0 6997 6787 7 1398 1223 188 46 16 chrX 106581974 106582277 -60068019 - Lx2B LINE L1 -827 6173 5862 7 1398 4319 56 2 5 chrX 106585857 106586433 -60063863 + L1Md_F2 LINE L1 5013 5586 -297 7 1398 7820 48 19 2 chrX 106586433 106587410 -60062886 + L1Md_F2 LINE L1 5587 6580 -2 7 1398 228 67 0 0 chrX 106587419 106587449 -60062847 + (A)n Simple_repeat Simple_repeat 1 30 0 7 1398 784 231 38 29 chrX 106588940 106589149 -60061147 + B3 SINE B2 1 211 -5 7 1398 560 284 126 13 chrX 106589352 106589744 -60060552 - L1MA6 LINE L1 -71 6226 5787 7 1398 21 36 0 0 chrX 106589749 106589777 -60060519 + AT_rich Low_complexity Low_complexity 1 28 0 7 1398 729 23 0 0 chrX 106589991 106590078 -60060218 + (CAAAT)n Simple_repeat Simple_repeat 3 89 0 7 1398 2839 169 145 10 chrX 106590301 106590888 -60059408 + RMER1A Other Other 361 1026 -4 7 1398 420 306 158 5 chrX 106590969 106591153 -60059143 + Lx5 LINE L1 6690 6901 -149 7 1398 420 292 36 28 chrX 106591161 106591435 -60058861 - L1MA6 LINE L1 -697 5603 5329 7 1398 1115 246 41 109 chrX 106591439 106591832 -60058464 + ORR1D2 LTR MaLR 5 370 0 8 1398 382 225 33 22 chrX 106591942 106592033 -60058263 - RLTR23 LTR ERV1 0 430 339 8 1398 378 0 0 0 chrX 106592296 106592338 -60057958 + (T)n Simple_repeat Simple_repeat 1 42 0 8 1398 194 0 0 37 chrX 106592388 106592415 -60057881 + (TTA)n Simple_repeat Simple_repeat 1 26 0 8 1398 6255 153 20 17 chrX 106592431 106593517 -60056779 - Lx3B LINE L1 -10 6963 5874 8 1398 497 298 39 57 chrX 106593771 106594156 -60056140 - L1MA6 LINE L1 -1325 4818 4441 7 1398 621 128 0 0 chrX 106594172 106594297 -60055999 + (TC)n Simple_repeat Simple_repeat 2 126 0 8 1398 516 229 61 0 chrX 106594302 106594433 -60055863 + L1M2 LINE L1 4640 4778 -1365 8 1398 4092 212 34 106 chrX 106594494 106596142 -60054154 - L1_Mur3 LINE L1 -3316 2564 1033 8 1398 517 168 29 10 chrX 106596142 106596244 -60054052 - RMER6C LTR ERVK -7 683 580 8 1398 5682 87 4 59 chrX 106596349 106596918 -60053378 + L1_Mus2 LINE L1 5018 5586 -297 8 1398 7695 60 2 11 chrX 106596918 106597922 -60052374 + L1Md_F2 LINE L1 5588 6582 0 9 1398 5682 68 5 6 chrX 106597922 106598413 -60051883 + L1_Mus2 LINE L1 5587 6028 -538 8 1398 1788 181 22 36 chrX 106598589 106598951 -60051345 - ORR1B2 LTR MaLR -8 359 3 9 1398 4783 191 94 116 chrX 106598954 106599380 -60050916 - ORR1B2-int LTR MaLR -1 1508 1109 9 1398 486 0 0 0 chrX 106599380 106599434 -60050862 + (TC)n Simple_repeat Simple_repeat 2 55 0 9 1398 4783 191 94 116 chrX 106599434 106600549 -60049747 - ORR1B2-int LTR MaLR -401 1108 2 9 1398 1520 202 102 35 chrX 106600549 106600893 -60049403 - ORR1B2 LTR MaLR 0 367 1 9 1398 331 288 134 20 chrX 106601918 106602120 -60048176 + L1ME1 LINE L1 2021 2245 -3997 9 1398 21 0 0 0 chrX 106602402 106602423 -60047873 + AT_rich Low_complexity Low_complexity 1 21 0 9 1398 26 30 0 0 chrX 106602571 106602604 -60047692 + AT_rich Low_complexity Low_complexity 1 33 0 9 1398 351 315 42 84 chrX 106602647 106603288 -60047008 + L1ME1 LINE L1 5349 5979 -200 9 1398 1971 216 122 11 chrX 106603493 106604036 -60046260 + RMER1C Other Other 739 1341 -1 9 1398 372 88 0 0 chrX 106604223 106604280 -60046016 + (TG)n Simple_repeat Simple_repeat 1 57 0 9 1398 225 94 0 0 chrX 106604427 106604459 -60045837 + (A)n Simple_repeat Simple_repeat 1 32 0 9 1398 6580 68 6 5 chrX 106604495 106605391 -60044905 + L1_Mus1 LINE L1 5671 6567 0 9 1398 1583 172 7 0 chrX 106605401 106605692 -60044604 - L1_Mur1 LINE L1 -144 5742 5450 1 1398 5397 122 8 12 chrX 106606075 106606998 -60043298 - L1_Mur1 LINE L1 -421 5465 4547 1 1398 3825 180 24 32 chrX 106606996 106607840 -60042456 + Lx3C LINE L1 5891 6727 -249 1 1398 29 0 0 0 chrX 106607871 106607900 -60042396 + AT_rich Low_complexity Low_complexity 1 29 0 1 1398 375 78 0 0 chrX 106607906 106607957 -60042339 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 1 1398 531 325 0 26 chrX 106607961 106608116 -60042180 - RSINE1 SINE B4 0 165 15 1 1398 245 333 92 8 chrX 106608728 106608858 -60041438 - L2 LINE L2 -685 2734 2594 1 1398 895 335 13 57 chrX 106608921 106609446 -60040850 + Lx9 LINE L1 6916 7417 -227 1 1398 360 0 0 0 chrX 106609462 106609502 -60040794 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1398 23 78 0 0 chrX 106609860 106609911 -60040385 + AT_rich Low_complexity Low_complexity 1 51 0 1 1398 443 227 34 0 chrX 106610032 106610120 -60040176 + B1_Mur3 SINE Alu 54 144 -5 1 1398 204 214 0 0 chrX 106610125 106610167 -60040129 + (TATG)n Simple_repeat Simple_repeat 4 45 0 1 1398 483 330 95 30 chrX 106610172 106610372 -60039924 - B4A SINE B4 -77 215 3 1 1398 21 0 0 0 chrX 106610383 106610404 -60039892 + AT_rich Low_complexity Low_complexity 1 21 0 1 1398 812 285 50 71 chrX 106610654 106610994 -60039302 - Lx8 LINE L1 -1 7472 7140 1 1398 622 283 165 32 chrX 106611172 106611795 -60038501 - L1_Mur3 LINE L1 -1936 4204 3499 1 1398 30 0 0 0 chrX 106612116 106612146 -60038150 + AT_rich Low_complexity Low_complexity 1 30 0 1 1398 870 99 42 0 chrX 106612315 106612457 -60037839 - Lx2 LINE L1 0 6997 6850 1 1398 22 35 0 0 chrX 106613064 106613093 -60037203 + AT_rich Low_complexity Low_complexity 1 29 0 1 1398 39 22 0 0 chrX 106614079 106614125 -60036171 + AT_rich Low_complexity Low_complexity 1 46 0 1 1398 833 255 9 36 chrX 106614229 106614449 -60035847 - B3 SINE B2 -1 215 2 1 1398 398 238 19 65 chrX 106614550 106614658 -60035638 + L1_Mur3 LINE L1 4041 4143 -1737 1 1398 500 271 62 0 chrX 106614817 106614961 -60035335 - Lx6 LINE L1 -11 7449 7297 1 1398 372 77 0 0 chrX 106615084 106615136 -60035160 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 1398 992 119 0 6 chrX 106615756 106615916 -60034380 + (GGAA)n Simple_repeat Simple_repeat 3 161 0 1 1398 438 69 0 0 chrX 106616669 106616727 -60033569 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1398 21 0 0 0 chrX 106618795 106618816 -60031480 + AT_rich Low_complexity Low_complexity 1 21 0 1 1398 580 258 60 18 chrX 106619161 106619327 -60030969 - MERVL-int LTR ERVL -5052 433 261 1 1398 29 0 0 0 chrX 106619710 106619739 -60030557 + AT_rich Low_complexity Low_complexity 1 29 0 1 1398 281 340 10 0 chrX 106619932 106620035 -60030261 - PB1 SINE Alu -2 125 22 1 1398 421 307 0 81 chrX 106620103 106620252 -60030044 + B1F SINE Alu 9 145 -4 1 1398 8044 170 23 16 chrX 106620301 106621118 -60029178 - Lx4A LINE L1 -9 7049 6212 1 1398 2243 140 34 31 chrX 106621118 106621532 -60028764 + RLTR9F LTR ERVK 1 415 0 1 1398 8044 168 16 15 chrX 106621532 106622441 -60027855 - Lx4A LINE L1 -847 6211 5303 1 1398 7874 133 54 8 chrX 106622411 106623835 -60026461 - Lx4A LINE L1 -1335 4542 3052 1 1398 351 0 0 0 chrX 106623835 106623874 -60026422 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1 1398 7874 133 54 8 chrX 106623874 106623908 -60026388 - Lx4A LINE L1 -2826 3051 3018 1 1398 1168 196 18 73 chrX 106623908 106624194 -60026102 - ORR1B2 LTR MaLR -97 270 1 1 1398 761 233 21 48 chrX 106624204 106624393 -60025903 - ORR1C1 LTR MaLR -85 293 110 1 1398 1521 157 48 84 chrX 106624393 106624748 -60025548 + RMER6C LTR ERVK 1 342 -348 1 1398 284 258 0 31 chrX 106624760 106624856 -60025440 + (CAGTT)n Simple_repeat Simple_repeat 5 97 0 1 1398 1886 210 26 31 chrX 106624867 106625284 -60025012 - Lx9 LINE L1 -594 7050 6636 1 1398 1979 228 65 40 chrX 106625281 106625908 -60024388 - L1_Rod LINE L1 -1580 4267 3625 1 1398 662 259 30 87 chrX 106626007 106626441 -60023855 + L1_Mus2 LINE L1 156 765 -5869 1 1398 19427 109 8 2 chrX 106626445 106630128 -60020168 + L1_Mus2 LINE L1 2860 6565 -1 1 1398 3754 109 0 0 chrX 106630237 106630795 -60019501 - L1_Mur1 LINE L1 -734 5152 4595 1 1398 246 62 0 0 chrX 106630795 106630827 -60019469 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1398 2312 45 0 3 chrX 106630912 106631201 -60019095 - L1Md_A LINE L1 0 6582 6295 1 1398 1764 20 0 0 chrX 106631201 106631402 -60018894 + L1Md_T LINE L1 5386 5586 -297 1 1398 8847 10 0 3 chrX 106631403 106632434 -60017862 + L1Md_T LINE L1 5588 6582 0 1 1398 8501 27 0 1 chrX 106632515 106633726 -60016570 - L1Md_T LINE L1 0 6582 5373 1 1398 18106 20 7 0 chrX 106633719 106635852 -60014444 + L1Md_T LINE L1 3221 5367 -516 1 1398 5132 99 21 4 chrX 106635842 106636640 -60013656 - L1_Mur1 LINE L1 -1269 4617 3806 1 1398 230 309 14 14 chrX 106636797 106636866 -60013430 + ID4 SINE ID 15 83 0 1 1398 440 48 0 31 chrX 106636974 106637038 -60013258 + (TATG)n Simple_repeat Simple_repeat 2 63 0 1 1398 3272 246 52 62 chrX 106637056 106638008 -60012288 - RMER1B Other Other -4 1062 120 1 1398 3119 146 9 21 chrX 106638705 106639231 -60011065 - Lx3A LINE L1 0 6981 6462 1 1398 2421 115 11 3 chrX 106639241 106639598 -60010698 + Lx3B LINE L1 6096 6455 -518 1 1398 251 308 104 55 chrX 106639865 106640047 -60010249 - MIRc SINE MIR -48 220 30 1 1398 255 61 0 0 chrX 106641658 106641691 -60008605 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 1398 310 371 34 8 chrX 106642038 106642155 -60008141 - PB1D7 SINE Alu 0 120 1 1 1398 9305 104 31 1 chrX 106642470 106643406 -60006890 - Lx3_Mus LINE L1 -8 7001 6051 1 1398 180 0 0 0 chrX 106643406 106643426 -60006870 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 1 1398 15468 89 16 12 chrX 106643426 106645845 -60004451 - Lx3_Mus LINE L1 -959 6050 3606 1 1398 3516 87 2 18 chrX 106645844 106646334 -60003962 + L1_Mus2 LINE L1 6042 6523 -43 1 1398 1320 13 0 0 chrX 106646356 106646506 -60003790 + L1_Mus2 LINE L1 5599 5748 -818 1 1398 303 45 0 0 chrX 106646507 106646551 -60003745 + L1_Mus2 LINE L1 6523 6566 0 1 1398 298 91 0 0 chrX 106646565 106646609 -60003687 - Lx3_Mus LINE L1 -2275 3611 3568 1 1398 1411 62 36 10 chrX 106646609 106646631 -60003665 - RLTR22_Mus LTR ERVK -1608 200 172 1 1398 297 0 0 0 chrX 106646631 106646664 -60003632 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 1398 189 0 0 0 chrX 106646664 106646684 -60003612 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1398 1411 62 36 10 chrX 106646684 106646854 -60003442 - RLTR22_Mus LTR ERVK -1637 171 3 1 1398 1040 237 91 28 chrX 106646855 106647142 -60003154 - BGLII_B LTR ERVK -82 359 55 1 1398 233 167 0 0 chrX 106647304 106647346 -60002950 - B1_Mur4 SINE Alu -58 92 51 1 1398 431 89 139 0 chrX 106647586 106647665 -60002631 - L1Md_F2 LINE L1 -23 6559 6470 1 1398 27665 92 3 3 chrX 106647654 106652499 -59997797 - L1Md_F LINE L1 -659 5224 380 1 1398 1544 151 8 0 chrX 106652504 106652763 -59997533 - Lx3_Mus LINE L1 -6048 936 676 1 1398 438 247 12 99 chrX 106652787 106652892 -59997404 - Lx3_Mus LINE L1 -6617 367 277 1 1398 3593 39 0 0 chrX 106652892 106653323 -59996973 + L1Md_A LINE L1 6151 6581 -1 1 1398 438 247 12 99 chrX 106653323 106653388 -59996908 - Lx3_Mus LINE L1 -6708 276 212 1 1398 2114 312 82 28 chrX 106654388 106655338 -59994958 - Lx8 LINE L1 -31 7442 6442 1 1398 342 0 0 0 chrX 106655354 106655392 -59994904 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1398 280 235 29 0 chrX 106655416 106655484 -59994812 - Lx8 LINE L1 -1306 6167 6098 1 1398 21 0 0 0 chrX 106655939 106655960 -59994336 + AT_rich Low_complexity Low_complexity 1 21 0 1 1398 3658 50 60 4 chrX 106656129 106656616 -59993680 + L1Md_F3 LINE L1 6056 6569 -15 1 1398 3326 50 0 0 chrX 106656849 106657245 -59993051 - MTA_Mm LTR MaLR 0 396 1 1 1398 25 65 0 0 chrX 106657397 106657443 -59992853 + AT_rich Low_complexity Low_complexity 1 46 0 1 1398 1701 197 8 81 chrX 106658418 106658788 -59991508 - MTC LTR MaLR -54 367 25 1 1398 1323 158 5 0 chrX 106658790 106659012 -59991284 - Lx2 LINE L1 0 6997 6775 1 1398 15201 158 16 5 chrX 106659012 106662588 -59987708 - Lx2 LINE L1 -354 6643 3023 1 1398 237 33 0 0 chrX 106662599 106662629 -59987667 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 1398 612 79 40 0 chrX 106662645 106662746 -59987550 - L1_Mus3 LINE L1 -1 6637 6533 1 1398 201 224 0 33 chrX 106663399 106663459 -59986837 + (TATATG)n Simple_repeat Simple_repeat 4 61 0 1 1398 781 301 8 5 chrX 106663562 106663929 -59986367 + L1_Mur3 LINE L1 3209 3576 -2304 1 1398 2015 227 48 130 chrX 106663940 106664710 -59985586 + RLTR40 LTR ERVK 3 709 -108 1 1398 1724 56 5 0 chrX 106664721 106664934 -59985362 - L1_Mus2 LINE L1 -298 6268 6055 1 1398 250 337 9 37 chrX 106664934 106665042 -59985254 + RLTR40 LTR ERVK 703 807 -10 1 1398 626 346 44 25 chrX 106665049 106665177 -59985119 + L1_Mur3 LINE L1 3605 3725 -2415 1 1398 3281 84 0 2 chrX 106665177 106665618 -59984678 + L1Md_F2 LINE L1 6143 6582 0 1 1398 626 328 53 16 chrX 106665618 106666007 -59984289 + L1_Mur3 LINE L1 3694 4097 -1783 1 1398 283 271 42 0 chrX 106666006 106666102 -59984194 + L1M3 LINE L1 4229 4328 -1815 1 1398 639 60 0 0 chrX 106666107 106666191 -59984105 + (TA)n Simple_repeat Simple_repeat 1 84 0 1 1398 314 219 54 47 chrX 106666206 106666335 -59983961 + L1M3 LINE L1 4566 4695 -1445 1 1398 1156 218 104 70 chrX 106666427 106666999 -59983297 + L1ME1 LINE L1 4860 5931 -248 1 1398 618 51 0 0 chrX 106667158 106667236 -59983060 + (TTTC)n Simple_repeat Simple_repeat 2 79 0 1 1398 359 200 98 22 chrX 106667237 106667329 -59982967 - B1_Mur4 SINE Alu 0 150 52 1 1398 4963 233 47 34 chrX 106667493 106669317 -59980979 + Lx5 LINE L1 5190 7034 -16 1 1398 35249 43 8 4 chrX 106669319 106674466 -59975830 + L1Md_T LINE L1 326 5588 -298 1 1398 8373 35 0 2 chrX 106674467 106675465 -59974831 + L1Md_T LINE L1 5590 6585 0 1 1398 298 218 75 81 chrX 106675551 106675711 -59974585 - L1M4 LINE L1 -855 5291 5133 1 1398 269 249 116 147 chrX 106675803 106675833 -59974463 - B2_Mm2 SINE B2 -3 192 163 1 1398 414 0 0 0 chrX 106675833 106675879 -59974417 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1398 397 249 116 147 chrX 106675879 106676046 -59974250 - B3A SINE B2 -33 162 1 1 1398 4437 234 58 28 chrX 106676161 106677358 -59972938 - Lx9 LINE L1 -11 7633 6402 1 1398 344 382 46 32 chrX 106678102 106678383 -59971913 - L3 LINE CR1 -2 4487 4203 1 1398 26 0 0 0 chrX 106678797 106678823 -59971473 + AT_rich Low_complexity Low_complexity 1 26 0 1 1398 556 263 25 19 chrX 106678868 106679027 -59971269 + Lx5 LINE L1 7064 7223 -237 1 1398 186 304 138 9 chrX 106679027 106679143 -59971153 - L3 LINE CR1 -721 3768 3638 1 1398 6740 135 72 32 chrX 106679502 106680649 -59969647 - Lx LINE L1 -4 6650 5450 1 1398 279 0 0 0 chrX 106680649 106680680 -59969616 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1398 6740 180 7 58 chrX 106680680 106681734 -59968562 - Lx LINE L1 -434 5449 4443 1 1398 3726 162 32 14 chrX 106681739 106682427 -59967869 + L1_Mur2 LINE L1 3714 4413 -1464 1 1398 22 0 0 0 chrX 106682538 106682560 -59967736 + AT_rich Low_complexity Low_complexity 1 22 0 1 1398 354 310 72 39 chrX 106682573 106682754 -59967542 - Lx8 LINE L1 -31 7442 7256 1 1398 282 149 0 0 chrX 106682769 106682816 -59967480 + Lx8 LINE L1 7076 7122 -351 1 1398 2673 89 47 5 chrX 106682889 106683293 -59967003 + BGLII LTR ERVK 1 421 0 2 1398 517 111 12 0 chrX 106683294 106683375 -59966921 + Lx2 LINE L1 6353 6434 -563 2 1398 24 0 0 0 chrX 106683916 106683940 -59966356 + AT_rich Low_complexity Low_complexity 1 24 0 2 1398 549 0 0 0 chrX 106684823 106684884 -59965412 + (CAAAA)n Simple_repeat Simple_repeat 5 65 0 2 1398 1093 324 106 56 chrX 106684955 106685685 -59964611 - Lx8 LINE L1 -358 7286 6383 1 1398 1163 304 70 6 chrX 106685689 106686033 -59964263 - ORR1D2 LTR MaLR -4 366 1 2 1398 242 200 40 0 chrX 106686048 106686098 -59964198 - Lx8 LINE L1 -1098 6375 6324 1 1398 486 46 0 0 chrX 106686132 106686197 -59964099 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 1398 297 269 52 30 chrX 106686448 106686582 -59963714 - Lx8 LINE L1 -1559 5914 5778 1 1398 1101 92 67 0 chrX 106686585 106686749 -59963547 - L1_Mus2 LINE L1 0 6566 6392 2 1398 1985 117 10 0 chrX 106686751 106687059 -59963237 - L1_Mm LINE L1 -1821 4062 3752 2 1398 6536 78 50 5 chrX 106687169 106688768 -59961528 - L1Md_F2 LINE L1 -1 6581 4893 2 1398 6291 109 31 10 chrX 106688757 106690580 -59959716 - L1Md_F2 LINE L1 -3718 2165 303 2 174 15520 130 2 11 chrX 106690575 106693286 -59957010 - L1Md_F LINE L1 -2124 3762 996 2 1399 8216 36 5 6 chrX 106693284 106694710 -59955586 - L1Md_F2 LINE L1 0 6582 5157 2 1399 2596 72 0 0 chrX 106694711 106695045 -59955251 + L1Md_F2 LINE L1 4822 5155 -728 2 1399 1594 253 37 89 chrX 106695043 106695832 -59954464 - L1Md_F LINE L1 -5496 1123 467 2 1399 488 197 21 57 chrX 106695839 106695979 -59954317 - Lx8 LINE L1 -83 5764 5630 1 1399 501 262 36 10 chrX 106696087 106696280 -59954016 - L1_Rod LINE L1 -4447 1400 1203 2 1399 371 193 36 12 chrX 106696357 106696441 -59953855 - L1_Rod LINE L1 -6512 1096 1011 2 1399 429 20 0 0 chrX 106696457 106696507 -59953789 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1399 1065 242 21 75 chrX 106696514 106696845 -59953451 - Lx7 LINE L1 -28 7668 7356 2 1399 27 29 0 0 chrX 106696857 106696891 -59953405 + AT_rich Low_complexity Low_complexity 1 34 0 2 1399 1247 124 0 15 chrX 106696893 106697090 -59953206 + B2_Mm2 SINE B2 2 195 0 2 1399 5392 224 10 47 chrX 106697107 106698323 -59951973 - Lx7 LINE L1 -333 7363 6193 2 1399 501 47 0 0 chrX 106698323 106698387 -59951909 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 2 1399 1076 297 70 43 chrX 106699165 106700073 -59950223 - L1M2 LINE L1 -1096 5047 4115 2 1399 555 85 0 0 chrX 106700111 106700193 -59950103 + (TTTC)n Simple_repeat Simple_repeat 2 83 0 2 1399 1399 129 23 0 chrX 106700298 106700515 -59949781 - Lx2 LINE L1 -6 6991 6770 2 1399 465 19 0 0 chrX 106701364 106701418 -59948878 + (TTTTA)n Simple_repeat Simple_repeat 2 55 0 2 1399 287 283 43 0 chrX 106701485 106701610 -59948686 - L1_Rod LINE L1 -4183 1664 1525 2 1399 276 30 0 0 chrX 106701689 106701722 -59948574 + (T)n Simple_repeat Simple_repeat 1 33 0 2 1399 1003 54 0 140 chrX 106701722 106701893 -59948403 - B1_Mm SINE Alu 0 147 1 2 1399 265 322 13 27 chrX 106702253 106702403 -59947893 + A-rich Low_complexity Low_complexity 2 149 0 2 1399 6380 120 19 2 chrX 106702559 106703192 -59947104 - Lx3A LINE L1 -430 6551 5916 2 1399 198 0 0 0 chrX 106703192 106703214 -59947082 + (TC)n Simple_repeat Simple_repeat 1 22 0 2 1399 6380 120 1 2 chrX 106703214 106703808 -59946488 - Lx3A LINE L1 -1066 5915 5311 2 1399 2920 90 33 12 chrX 106703808 106704235 -59946061 + Lx3A LINE L1 6533 6968 -13 2 1399 342 0 0 0 chrX 106704235 106704273 -59946023 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2 1399 28 61 0 0 chrX 106704488 106704537 -59945759 + AT_rich Low_complexity Low_complexity 1 49 0 2 1399 188 67 33 0 chrX 106705574 106705604 -59944692 + (TTTTC)n Simple_repeat Simple_repeat 1 31 0 2 1399 477 50 0 0 chrX 106705663 106705723 -59944573 + (TTCC)n Simple_repeat Simple_repeat 2 61 0 2 1399 1301 154 22 13 chrX 106705724 106705954 -59944342 - Lx4B LINE L1 -8 7050 6819 2 1399 1926 152 21 52 chrX 106705954 106706377 -59943919 + RMER17C LTR ERVK 1 410 0 2 1399 2184 188 67 44 chrX 106706377 106706901 -59943395 + RMER17C-int LTR ERVK 1 536 -2702 2 1399 459 0 0 0 chrX 106707972 106708023 -59942273 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 1399 2006 169 132 35 chrX 106708138 106708599 -59941697 + RMER17C-int LTR ERVK 1508 2013 -1225 2 1399 781 38 9 9 chrX 106708600 106708706 -59941590 + (GAA)n Simple_repeat Simple_repeat 1 106 0 2 1399 510 189 35 26 chrX 106708707 106708821 -59941475 + RMER17C-int LTR ERVK 2174 2288 -950 2 1399 3134 141 123 14 chrX 106708829 106709042 -59941254 + RMER17C-int LTR ERVK 2591 2861 -377 2 1399 504 0 0 0 chrX 106709042 106709098 -59941198 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 2 1399 3134 141 123 14 chrX 106709098 106709468 -59940828 + RMER17C-int LTR ERVK 2862 3237 -1 2 1399 1512 185 35 75 chrX 106709468 106709692 -59940604 + RMER17C LTR ERVK 1 213 -197 2 1399 351 0 0 0 chrX 106709692 106709731 -59940565 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 1399 1512 185 35 75 chrX 106709731 106709933 -59940363 + RMER17C LTR ERVK 214 410 0 2 1399 5370 186 103 18 chrX 106709939 106709987 -59940309 - Lx4B LINE L1 -242 6816 6766 2 1399 333 0 0 0 chrX 106709987 106710024 -59940272 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1399 7047 158 171 42 chrX 106710024 106711851 -59938445 - Lx4B LINE L1 -293 6765 4728 2 1399 618 14 0 0 chrX 106711851 106711922 -59938374 + (TTG)n Simple_repeat Simple_repeat 2 72 0 2 1399 1076 83 0 6 chrX 106711922 106712080 -59938216 + (TTCTCC)n Simple_repeat Simple_repeat 1 157 0 2 1399 1211 56 0 6 chrX 106712083 106712244 -59938052 + (TTTC)n Simple_repeat Simple_repeat 3 162 0 2 1399 7047 136 222 60 chrX 106712244 106712854 -59937442 - Lx4B LINE L1 -1150 4727 3954 2 1399 992 131 0 0 chrX 106714058 106714195 -59936101 + B1_Mus1 SINE Alu 3 139 -9 2 1399 399 122 22 11 chrX 106714677 106714768 -59935528 + (TA)n Simple_repeat Simple_repeat 1 92 0 2 1399 6982 40 0 0 chrX 106715118 106715952 -59934344 + L1Md_T LINE L1 5737 6570 -12 2 1399 775 172 7 29 chrX 106715977 106716115 -59934181 + B1_Mur2 SINE Alu 10 144 -5 2 1399 218 195 0 0 chrX 106716115 106716156 -59934140 + (CAAT)n Simple_repeat Simple_repeat 3 43 0 2 1399 415 333 125 17 chrX 106716160 106716456 -59933840 + Lx8 LINE L1 7137 7464 -9 2 1399 1491 175 47 14 chrX 106717303 106717599 -59932697 - Lx5 LINE L1 0 7050 6745 2 1399 720 23 0 0 chrX 106717600 106717686 -59932610 + (CA)n Simple_repeat Simple_repeat 1 86 0 2 1399 3536 174 16 55 chrX 106717731 106718550 -59931746 - Lx5 LINE L1 -747 6303 5488 2 1399 204 83 56 0 chrX 106718890 106718926 -59931370 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 2 1399 1251 142 36 6 chrX 106719420 106719695 -59930601 + L1_Mur1 LINE L1 5214 5498 -388 2 1399 1173 306 74 11 chrX 106719703 106720231 -59930065 - L1_Mur3 LINE L1 -12 5868 5308 2 1399 257 239 11 43 chrX 106720498 106720590 -59929706 - L1_Mur3 LINE L1 -891 4986 4898 2 1399 289 274 17 26 chrX 106720595 106720711 -59929585 + L1_Mur3 LINE L1 4237 4351 -1529 2 1399 348 216 0 128 chrX 106720711 106720844 -59929452 + MT2B LTR ERVL 142 257 -344 2 1399 678 229 8 0 chrX 106720744 106720875 -59929421 + B1_Mur4 SINE Alu 6 137 -13 2 1399 515 354 35 12 chrX 106720896 106721164 -59929132 + L1M2 LINE L1 4404 4672 -1471 2 1399 569 14 14 0 chrX 106721164 106721234 -59929062 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 2 1399 515 354 35 12 chrX 106721234 106721305 -59928991 + L1M2 LINE L1 4673 4750 -1393 2 1399 444 328 25 0 chrX 106721307 106721429 -59928867 - B3A SINE B2 -38 160 36 2 1399 216 97 0 0 chrX 106721451 106721482 -59928814 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1399 7128 96 5 2 chrX 106721498 106723086 -59927210 - L1_Mus2 LINE L1 0 6566 4974 2 1399 387 263 174 81 chrX 106723107 106723260 -59927036 - L1M4 LINE L1 -3048 3098 2940 2 1399 697 197 0 25 chrX 106723260 106723421 -59926875 - L1Md_F2 LINE L1 0 6582 6426 2 1399 387 263 174 81 chrX 106723421 106723565 -59926731 - L1M4 LINE L1 -3207 2939 2773 2 1399 2426 167 66 157 chrX 106723642 106724401 -59925895 - RMER6C LTR ERVK 0 690 1 2 1399 1056 66 0 0 chrX 106724540 106724676 -59925620 + B1_Mm SINE Alu 12 147 0 2 1399 225 294 55 16 chrX 106725177 106725305 -59924991 - L1M4 LINE L1 -3453 2687 2555 2 1399 410 272 104 5 chrX 106725581 106725773 -59924523 - L1MA9 LINE L1 -74 6238 6028 2 1399 594 0 0 0 chrX 106726254 106726320 -59923976 + (TTTC)n Simple_repeat Simple_repeat 4 69 0 2 1399 1053 97 17 17 chrX 106726329 106726507 -59923789 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 2 1399 468 0 0 0 chrX 106726509 106726561 -59923735 + (TTTC)n Simple_repeat Simple_repeat 1 52 0 2 1399 304 49 32 16 chrX 106726585 106726647 -59923649 - L1VL4 LINE L1 -4 3555 3493 2 1399 8382 56 3 3 chrX 106726637 106728413 -59921883 - L1Md_F2 LINE L1 -4 6578 4804 2 1399 4703 88 36 36 chrX 106728412 106728816 -59921480 - L1VL4 LINE L1 -53 3506 3123 2 1399 566 28 0 14 chrX 106728816 106728889 -59921407 + (TTG)n Simple_repeat Simple_repeat 2 73 0 2 1399 4703 88 36 36 chrX 106728889 106729253 -59921043 - L1VL4 LINE L1 -437 3122 2738 2 1399 5652 88 54 1 chrX 106729248 106729680 -59920616 - L1VL4 LINE L1 -1783 1776 1345 2 1399 189 0 0 0 chrX 106729680 106729701 -59920595 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 2 1399 5652 107 55 5 chrX 106729701 106730751 -59919545 - L1VL4 LINE L1 -2215 1344 212 2 1399 440 35 0 17 chrX 106730924 106730983 -59919313 + (TA)n Simple_repeat Simple_repeat 2 59 0 2 1399 283 197 104 78 chrX 106731111 106731265 -59919031 - L1MA7 LINE L1 -110 6181 6024 2 1399 876 258 9 23 chrX 106731421 106731635 -59918661 - B3 SINE B2 -5 211 1 2 1399 522 312 51 19 chrX 106731690 106731868 -59918428 + ID_B1 SINE B4 36 225 -67 2 1399 383 342 79 30 chrX 106732055 106732257 -59918039 + L1M2 LINE L1 4601 4812 -1331 2 1399 38193 9 0 7 chrX 106732537 106737726 -59912570 + L1Md_A LINE L1 440 5586 -297 2 1399 8886 10 0 0 chrX 106737726 106738722 -59911574 + L1Md_A LINE L1 5587 6582 0 2 1399 253 281 102 27 chrX 106738915 106739061 -59911235 + L1MA4 LINE L1 3686 3841 -2302 2 1399 233 29 0 29 chrX 106739061 106739096 -59911200 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 2 1399 253 281 102 27 chrX 106739096 106739242 -59911054 + L1MA4 LINE L1 3842 4000 -2143 2 1399 249 305 34 8 chrX 106739279 106739398 -59910898 + L1MA4 LINE L1 4104 4225 -1918 2 1399 25 99 0 0 chrX 106739525 106739606 -59910690 + AT_rich Low_complexity Low_complexity 1 81 0 2 1399 935 246 62 0 chrX 106739615 106739826 -59910470 - RLTR40 LTR ERVK -7 810 587 2 1399 1508 202 85 36 chrX 106739822 106740187 -59910109 - RLTR40 LTR ERVK -414 403 21 2 1399 6935 171 55 29 chrX 106740200 106741931 -59908365 - Lx4B LINE L1 -4 7054 5289 2 1399 396 0 0 0 chrX 106741931 106741975 -59908321 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 2 1399 4906 159 47 24 chrX 106741975 106742328 -59907968 - Lx4B LINE L1 -589 5288 4913 2 1399 2189 190 19 14 chrX 106742326 106742748 -59907548 + Lx5 LINE L1 6334 6757 -293 2 1399 25 31 0 0 chrX 106742819 106742851 -59907445 + AT_rich Low_complexity Low_complexity 1 32 0 2 1399 545 259 101 13 chrX 106742856 106743124 -59907172 + L1MA4 LINE L1 5341 5642 -661 2 1399 593 287 33 71 chrX 106743204 106743444 -59906852 + MTEa LTR MaLR 147 377 -2 2 1399 523 221 142 50 chrX 106743446 106743742 -59906554 + L1MA4 LINE L1 5639 5959 -341 2 1399 275 330 83 28 chrX 106743750 106743859 -59906437 + MER44D DNA MER2_type 11 125 -580 2 1399 387 188 0 0 chrX 106744520 106744632 -59905664 + T-rich Low_complexity Low_complexity 1 112 0 2 1399 1189 61 0 0 chrX 106744632 106744779 -59905517 - B1_Mus2 SINE Alu 0 147 1 2 1399 22 0 0 0 chrX 106744779 106744801 -59905495 + AT_rich Low_complexity Low_complexity 1 22 0 2 1399 443 189 57 0 chrX 106744893 106744999 -59905297 + Lx7 LINE L1 7585 7696 0 2 1399 543 246 52 15 chrX 106745176 106745312 -59904984 - B1_Mus1 SINE Alu -7 141 1 2 1399 416 273 238 25 chrX 106745312 106745665 -59904631 + L1M2 LINE L1 4843 5270 -873 2 1399 30 0 0 0 chrX 106745885 106745915 -59904381 + AT_rich Low_complexity Low_complexity 1 30 0 2 1399 4948 186 55 17 chrX 106745959 106746939 -59903357 - RLTR25B LTR ERVK 0 1028 12 2 1399 743 298 10 5 chrX 106747997 106748203 -59902093 + B3 SINE B2 1 207 -9 2 1399 1010 309 56 22 chrX 106748512 106748922 -59901374 - Lx8 LINE L1 -210 7263 6840 2 1399 235 383 0 0 chrX 106749146 106749227 -59901069 - MLT1E LTR MaLR -119 534 454 2 1399 2101 77 3 7 chrX 106749252 106749538 -59900758 - L1_Mus2 LINE L1 0 6566 6282 3 1399 1006 33 0 8 chrX 106749539 106749662 -59900634 + L1_Mus2 LINE L1 6157 6278 -288 3 1399 3447 157 18 0 chrX 106750028 106750590 -59899706 - Lx2 LINE L1 0 6997 6426 3 1399 594 203 24 75 chrX 106751705 106751918 -59898378 + Lx9 LINE L1 7441 7642 -2 3 1399 619 244 48 86 chrX 106751932 106752269 -59898027 + Lx9 LINE L1 7317 7640 -4 3 1399 1280 168 34 4 chrX 106752478 106752717 -59897579 - Lx LINE L1 -8 6646 6401 3 1399 198 0 0 0 chrX 106752719 106752741 -59897555 + (TAA)n Simple_repeat Simple_repeat 1 22 0 3 1399 4912 58 10 0 chrX 106754819 106755442 -59894854 - L1_Mus1 LINE L1 0 6567 5939 3 1399 28 29 0 0 chrX 106756209 106756244 -59894052 + AT_rich Low_complexity Low_complexity 1 35 0 3 1399 336 48 0 0 chrX 106756284 106756326 -59893970 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1399 23 33 0 0 chrX 106756591 106756621 -59893675 + AT_rich Low_complexity Low_complexity 1 30 0 3 1399 2350 202 59 59 chrX 106756815 106757456 -59892840 - RLTR40 LTR ERVK -22 795 155 3 1399 946 258 52 0 chrX 106757467 106757734 -59892562 - Lx6 LINE L1 -26 7434 7154 3 1399 4302 203 78 6 chrX 106757732 106758776 -59891520 - L1_Mur3 LINE L1 -557 5323 4205 3 1399 4007 254 18 8 chrX 106758778 106759668 -59890628 - Lx5 LINE L1 -34 7016 6118 3 1399 1987 193 49 3 chrX 106759680 106760049 -59890247 + ORR1B1 LTR MaLR 1 386 -8 3 1399 3825 154 38 16 chrX 106760053 106760995 -59889301 - Lx5 LINE L1 -946 6104 5136 3 1399 3148 197 89 7 chrX 106760994 106761749 -59888547 - Lx5 LINE L1 -1743 4137 3321 3 1399 1286 161 60 15 chrX 106761761 106762026 -59888270 - Lx2 LINE L1 -1 6996 6720 3 1399 307 209 18 0 chrX 106762764 106762874 -59887422 + (TA)n Simple_repeat Simple_repeat 2 113 0 3 1399 396 0 0 0 chrX 106762886 106762930 -59887366 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1399 23 33 0 0 chrX 106763305 106763335 -59886961 + AT_rich Low_complexity Low_complexity 1 30 0 3 1399 982 257 174 15 chrX 106763336 106763727 -59886569 - Lx8 LINE L1 -13 7460 7008 3 1399 3988 165 47 32 chrX 106763750 106764533 -59885763 - Lx5 LINE L1 -654 6396 5602 3 1399 25 31 0 0 chrX 106764815 106764847 -59885449 + AT_rich Low_complexity Low_complexity 1 32 0 3 1399 352 382 25 65 chrX 106765458 106765735 -59884561 - MLT1J1 LTR MaLR -172 272 7 3 1399 328 322 91 0 chrX 106765847 106765968 -59884328 - MER94 DNA AcHobo 0 134 3 3 1399 447 278 67 31 chrX 106766683 106766906 -59883390 - L1MA8 LINE L1 -1 6290 6060 3 1399 27273 41 1 3 chrX 106766907 106770958 -59879338 - L1Md_F2 LINE L1 -1 6581 2540 3 1399 3876 148 8 2 chrX 106770949 106771586 -59878710 - L1_Mur2 LINE L1 -1114 4763 4123 3 1399 5923 165 36 8 chrX 106771586 106771741 -59878555 + Lx3C LINE L1 5804 5959 -1017 3 1399 2829 25 0 21 chrX 106771741 106772075 -59878221 - IAPLTR2b LTR ERVK 0 327 1 3 1399 5923 165 36 8 chrX 106772075 106773053 -59877243 + Lx3C LINE L1 5960 6969 -7 3 1399 24 32 0 0 chrX 106773056 106773087 -59877209 + AT_rich Low_complexity Low_complexity 1 31 0 3 1399 1771 346 60 42 chrX 106774129 106775350 -59874946 - Lx9 LINE L1 -25 7448 6233 3 1399 766 282 140 47 chrX 106775432 106775883 -59874413 + MT2B2 LTR ERVL 1 584 0 3 1399 1405 259 67 21 chrX 106775912 106776532 -59873764 - Lx9 LINE L1 -1546 6098 5423 3 1399 861 333 56 8 chrX 106776529 106776769 -59873527 - Lx8 LINE L1 -461 7012 6765 3 1399 705 85 0 0 chrX 106776769 106776875 -59873421 + (GAAAA)n Simple_repeat Simple_repeat 5 110 0 3 1399 861 333 56 8 chrX 106776875 106777009 -59873287 - Lx8 LINE L1 -709 6764 6621 3 1399 1203 288 68 36 chrX 106777034 106777608 -59872688 - L1_Mur3 LINE L1 -3519 2361 1767 3 1399 236 53 26 0 chrX 106777608 106777646 -59872650 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 1399 1203 288 68 36 chrX 106777646 106777658 -59872638 - L1_Mur3 LINE L1 -4114 1766 1756 3 1399 1251 161 23 46 chrX 106777667 106777927 -59872369 - Lx3A LINE L1 -5 6976 6723 3 1399 2796 211 100 22 chrX 106778059 106778826 -59871470 - Lx9 LINE L1 -1 7643 6817 3 1399 1556 174 5 7 chrX 106778827 106779190 -59871106 - Lx9 LINE L1 -898 4988 4692 3 1399 1458 114 17 0 chrX 106779190 106779427 -59870869 + L1_Mus3 LINE L1 6398 6638 0 3 1399 784 133 0 14 chrX 106779439 106779584 -59870712 + (GAAA)n Simple_repeat Simple_repeat 1 143 0 3 1399 505 247 19 68 chrX 106779584 106779745 -59870551 - Lx9 LINE L1 -858 6786 6634 3 1399 756 273 128 19 chrX 106779740 106779860 -59870436 - L1_Mur3 LINE L1 -170 5677 5542 3 1399 2001 130 6 39 chrX 106779860 106780196 -59870100 - ORR1A3 LTR MaLR 0 326 2 3 1399 756 266 130 21 chrX 106780196 106780452 -59869844 - L1_Mur3 LINE L1 -303 5577 5285 3 1399 22 56 0 0 chrX 106780454 106780490 -59869806 + AT_rich Low_complexity Low_complexity 1 36 0 3 1399 216 97 0 0 chrX 106780597 106780628 -59869668 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1399 561 158 0 0 chrX 106780624 106780725 -59869571 + (TA)n Simple_repeat Simple_repeat 2 102 0 3 1399 1667 164 3 83 chrX 106780725 106781064 -59869232 + ORR1B1 LTR MaLR 29 340 -54 3 1399 2265 202 32 35 chrX 106781070 106781608 -59868688 + Lx6 LINE L1 5597 6132 -1328 3 1399 6221 156 57 58 chrX 106781612 106782308 -59867988 + RLTR21 LTR ERVK 1 707 -865 3 1399 2306 115 11 20 chrX 106782308 106782662 -59867634 + Lx2 LINE L1 6646 6996 -1 3 1399 6221 156 57 58 chrX 106782662 106782806 -59867490 + RLTR21 LTR ERVK 708 832 -740 3 1399 1013 134 36 41 chrX 106782806 106783001 -59867295 - B2_Mm2 SINE B2 0 195 2 3 1399 6221 156 57 58 chrX 106783001 106783416 -59866880 + RLTR21 LTR ERVK 833 1256 -316 3 1399 387 253 6 22 chrX 106783420 106783602 -59866694 + (TA)n Simple_repeat Simple_repeat 2 180 0 3 1399 673 242 155 21 chrX 106783607 106783898 -59866398 + RLTR21 LTR ERVK 923 1252 -320 3 1399 206 149 20 41 chrX 106783915 106783964 -59866332 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 3 1399 971 198 374 31 chrX 106784014 106784399 -59865897 + RLTR21 LTR ERVK 1056 1572 0 3 1399 1634 308 23 20 chrX 106784400 106785376 -59864920 + Lx6 LINE L1 6163 7434 -26 3 1399 639 220 44 44 chrX 106785393 106785574 -59864722 - Lx6 LINE L1 -175 7285 7105 3 1399 1320 242 41 14 chrX 106785610 106785979 -59864317 - L1_Rod LINE L1 -626 5221 4843 3 1399 3816 166 27 5 chrX 106785982 106786652 -59863644 + RLTR17 LTR ERVK 1 685 -7 3 1399 210 143 0 0 chrX 106786652 106786687 -59863609 + (T)n Simple_repeat Simple_repeat 1 35 0 3 1399 1671 283 55 20 chrX 106786710 106786834 -59863462 - L1M2 LINE L1 -1248 4895 4749 3 1399 338 42 0 20 chrX 106786834 106786883 -59863413 + (TTA)n Simple_repeat Simple_repeat 2 49 0 3 1399 1671 283 55 20 chrX 106786883 106787518 -59862778 - L1M2 LINE L1 -1395 4748 4109 3 1399 1043 93 0 0 chrX 106787567 106787707 -59862589 - B1_Mus1 SINE Alu -5 143 4 3 1399 280 282 115 44 chrX 106787713 106787895 -59862401 - L1_Mur3 LINE L1 -600 5280 5086 3 1399 456 378 51 27 chrX 106788241 106788497 -59861799 + MTE-int LTR MaLR 755 1016 -564 3 1399 1786 229 100 52 chrX 106788509 106789167 -59861129 - RMER6C LTR ERVK 0 690 1 3 1399 1035 378 62 12 chrX 106789167 106789668 -59860628 + MTE-int LTR MaLR 1019 1544 -36 3 1399 371 306 87 16 chrX 106789710 106789836 -59860460 + MTD LTR MaLR 285 419 0 3 1399 270 222 50 92 chrX 106790887 106791006 -59859290 - L1MEg LINE L1 -3829 2317 2204 3 1399 835 293 66 84 chrX 106791129 106791461 -59858835 + MTE2b LTR MaLR 1 326 -53 3 1399 1285 53 0 17 chrX 106791591 106791763 -59858533 + B2_Mm1a SINE B2 22 190 -3 3 1399 270 410 4 81 chrX 106791782 106791929 -59858367 + MLT1D LTR MaLR 241 375 -130 3 1399 491 302 0 51 chrX 106791929 106792086 -59858210 - B1_Mur3 SINE Alu 0 149 1 3 1399 270 410 4 81 chrX 106792086 106792211 -59858085 + MLT1D LTR MaLR 376 492 -13 3 1399 253 390 109 79 chrX 106792416 106792678 -59857618 - B4A SINE B4 -11 281 4 3 1399 423 0 0 0 chrX 106792678 106792725 -59857571 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 1399 307 294 118 53 chrX 106793013 106793105 -59857191 - L1MEg LINE L1 -4874 1368 1270 3 1399 363 23 0 0 chrX 106793105 106793149 -59857147 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1399 307 294 118 53 chrX 106793149 106793243 -59857053 - L1MEg LINE L1 -4973 1269 1170 3 1399 715 298 49 92 chrX 106793354 106793724 -59856572 - MT2B LTR ERVL 0 601 248 3 1399 3100 39 5 73 chrX 106793790 106794230 -59856066 + L1Md_F3 LINE L1 6175 6584 0 3 1399 414 253 0 0 chrX 106794306 106794393 -59855903 - MT2B LTR ERVL -445 88 2 3 1399 12418 101 12 8 chrX 106794393 106797161 -59853135 + L1Md_F LINE L1 162 2938 -2945 3 1399 7013 116 5 3 chrX 106797159 106798742 -59851554 + L1_Mus3 LINE L1 5048 6635 -3 3 1399 796 281 13 38 chrX 106798768 106799005 -59851291 + MTD LTR MaLR 109 339 -80 3 1399 532 254 52 139 chrX 106799072 106799324 -59850972 + MTC-int LTR MaLR 28 257 -1001 3 1399 35680 62 6 7 chrX 106799325 106804762 -59845534 + L1Md_T LINE L1 152 5586 -297 3 1399 7980 56 1 0 chrX 106804762 106805757 -59844539 + L1Md_T LINE L1 5587 6582 0 3 1399 392 169 114 57 chrX 106805757 106805827 -59844469 + MTC-int LTR MaLR 244 323 -935 3 1399 4559 122 31 22 chrX 106805827 106806629 -59843667 - RMER17D2 LTR ERVK 0 809 1 3 1399 392 169 114 57 chrX 106806629 106806646 -59843650 + MTC-int LTR MaLR 324 336 -922 3 1399 322 262 12 12 chrX 106806649 106806734 -59843562 + MTD LTR MaLR 11 95 -324 3 1399 1447 122 70 4 chrX 106806735 106806965 -59843331 - Lx4A LINE L1 -328 6730 6486 3 1399 1336 184 14 51 chrX 106806968 106807243 -59843053 + Lx4A LINE L1 6794 7058 0 3 1399 1247 282 47 9 chrX 106807270 106807592 -59842704 + MTD LTR MaLR 86 419 0 3 1399 237 341 21 21 chrX 106807592 106807685 -59842611 - Lx8 LINE L1 -1184 6289 6197 3 1399 305 285 30 89 chrX 106807702 106807837 -59842459 + ORR1D2 LTR MaLR 213 339 -31 3 1399 364 386 0 7 chrX 106807915 106808069 -59842227 - RSINE1 SINE B4 -10 155 3 3 1399 343 333 46 11 chrX 106808085 106808466 -59841830 - L1MDa LINE L1 -4640 1993 1590 3 1399 4479 169 50 5 chrX 106808474 106809326 -59840970 + L1_Mm LINE L1 4924 5814 -69 3 1399 5063 173 23 4 chrX 106809328 106810270 -59840026 + Lx2 LINE L1 6036 6995 -2 3 1399 783 238 42 5 chrX 106810348 106810538 -59839758 - Lx6 LINE L1 -168 7292 7096 3 1399 269 279 80 18 chrX 106810645 106810758 -59839538 - Lx2B LINE L1 -42 6958 6839 3 1399 882 166 118 28 chrX 106810752 106810967 -59839329 - Lx LINE L1 -428 6569 6157 3 1399 1965 187 50 15 chrX 106811284 106811870 -59838426 + RMER6A LTR ERVK 1 756 0 3 1399 2455 242 75 117 chrX 106811870 106812708 -59837588 - L1_Mur3 LINE L1 -2323 3557 2720 3 1399 568 278 7 7 chrX 106812708 106812853 -59837443 + B1_Mur1 SINE Alu 3 147 -2 3 1399 2455 242 75 117 chrX 106812853 106812927 -59837369 - L1_Mur3 LINE L1 -3161 2719 2679 3 1399 1002 174 119 0 chrX 106812927 106813128 -59837168 - URR1A DNA MER1_type 0 226 2 3 1399 2455 242 75 117 chrX 106813128 106813239 -59837057 - L1_Mur3 LINE L1 -3202 2678 2565 3 1399 225 0 0 0 chrX 106813239 106813264 -59837032 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 1399 2455 242 75 117 chrX 106813264 106813509 -59836787 - L1_Mur3 LINE L1 -3316 2564 2341 3 1399 3545 149 80 19 chrX 106813499 106813991 -59836305 + L1_Mur2 LINE L1 4817 5304 -573 3 1399 2202 88 15 38 chrX 106813991 106814332 -59835964 + L1Md_F3 LINE L1 6252 6584 0 4 1399 3545 149 80 19 chrX 106814332 106814515 -59835781 + L1_Mur2 LINE L1 5305 5531 -346 3 1399 676 264 24 0 chrX 106814695 106814862 -59835434 - L1M3 LINE L1 -2009 4131 3961 4 1399 1305 306 74 35 chrX 106814991 106815533 -59834763 - Lx9 LINE L1 -226 7418 6856 4 1399 429 248 150 20 chrX 106815540 106815840 -59834456 - L1M3 LINE L1 -2191 3952 3614 4 1399 395 288 44 18 chrX 106817203 106817316 -59832980 + ORR1E LTR MaLR 2 117 -242 4 1399 374 254 59 67 chrX 106817461 106817533 -59832763 + MT2B LTR ERVL 122 192 -409 4 1399 258 299 56 91 chrX 106817533 106817740 -59832556 + B1_Mur2 SINE Alu 2 147 -2 4 1399 1439 159 0 72 chrX 106817876 106818168 -59832128 + RMER6C LTR ERVK 418 688 -2 4 1399 5743 153 7 64 chrX 106819122 106820200 -59830096 + L1VL1 LINE L1 1 1016 -5406 4 1399 3077 97 9 0 chrX 106820199 106820622 -59829674 + L1_Mus2 LINE L1 6107 6533 -33 4 1399 212 288 51 0 chrX 106821651 106821710 -59828586 + MIRb SINE MIR 113 174 -94 4 1399 219 69 0 0 chrX 106821858 106821887 -59828409 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 1399 333 0 0 0 chrX 106822149 106822186 -59828110 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1400 455 289 34 51 chrX 106823684 106823859 -59826437 - MLT1A0 LTR MaLR -31 334 163 4 1400 674 157 144 6 chrX 106823876 106824056 -59826240 + Lx9 LINE L1 7437 7641 -3 4 1400 1095 49 42 0 chrX 106824804 106824947 -59825349 + B1_Mur4 SINE Alu 2 150 0 4 1400 2456 258 93 2 chrX 106824971 106825322 -59824974 + Lx6 LINE L1 5301 5680 -1780 4 1400 324 0 0 0 chrX 106825322 106825358 -59824938 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1400 2456 302 96 60 chrX 106825358 106826687 -59823609 + Lx6 LINE L1 5681 7059 -401 4 1400 1074 222 107 16 chrX 106826687 106826939 -59823357 + Lx6 LINE L1 7182 7456 -4 4 1400 1068 267 90 24 chrX 106826956 106827367 -59822929 + Lx8 LINE L1 6034 6471 -1002 4 1400 1762 209 48 28 chrX 106827367 106827800 -59822496 + RMER10A LTR ERVL 1 442 0 4 1400 7200 91 16 4 chrX 106827902 106829286 -59821010 - L1_Mus2 LINE L1 -1 6565 5162 4 1400 317 129 0 46 chrX 106830277 106830342 -59819954 + RLTR42-int LTR ERVK 899 960 -5177 4 1400 23 33 0 0 chrX 106830659 106830689 -59819607 + AT_rich Low_complexity Low_complexity 1 30 0 4 1400 353 227 101 20 chrX 106830815 106830914 -59819382 + RLTR42-int LTR ERVK 1689 1795 -3727 4 1400 687 145 89 117 chrX 106831265 106831522 -59818774 + RLTR42-int LTR ERVK 1870 2119 -3403 4 1400 251 209 32 2 chrX 106831563 106831631 -59818665 + MYSERV-int LTR ERVK 5730 5789 -761 4 1400 4411 37 2 9 chrX 106831666 106832211 -59818085 - L1Md_F2 LINE L1 0 6582 6042 4 1400 1039 67 0 0 chrX 106832211 106832346 -59817950 - B1_Mm SINE Alu -3 144 10 4 1400 357 246 78 89 chrX 106832644 106832846 -59817450 + RLTR19-int LTR ERVK 2876 3052 -3085 4 1400 402 21 0 0 chrX 106833102 106833149 -59817147 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 1400 317 300 44 57 chrX 106833153 106833312 -59816984 + RMER17C-int LTR ERVK 2628 2784 -454 4 1400 6476 170 60 18 chrX 106833368 106835191 -59815105 + Lx2B LINE L1 5015 6911 -89 4 1400 1165 141 38 0 chrX 106835533 106835746 -59814550 - L1_Mm LINE L1 -501 5382 5162 4 1400 14124 101 19 14 chrX 106835786 106838770 -59811526 - L1Md_F2 LINE L1 -11 6571 3575 4 1400 6969 104 7 2 chrX 106838766 106839947 -59810349 + L1_Mus2 LINE L1 5379 6565 -1 4 1400 324 152 25 25 chrX 106840031 106840112 -59810184 + RMER10A LTR ERVL 362 442 0 4 1400 911 339 110 29 chrX 106840112 106840876 -59809420 + Lx8 LINE L1 6467 7331 -142 4 1400 283 232 20 29 chrX 106840935 106841037 -59809259 + Lx9 LINE L1 7543 7643 -1 4 1400 272 256 101 31 chrX 106841033 106841162 -59809134 + Lx8 LINE L1 7335 7472 -1 4 1400 4305 105 20 2 chrX 106842739 106843352 -59806944 + L1_Mus4 LINE L1 5852 6475 -161 4 1400 772 239 92 76 chrX 106843455 106843890 -59806406 + RMER10A LTR ERVL 1 442 0 4 1400 2989 56 3 3 chrX 106844810 106845216 -59805080 + L1Md_F2 LINE L1 6195 6582 0 4 1400 2067 189 60 3 chrX 106845922 106846304 -59803992 + MTC LTR MaLR 10 413 -8 4 1400 282 338 0 0 chrX 106846826 106846894 -59803402 + B1_Mur3 SINE Alu 1 68 -81 4 1400 298 135 19 0 chrX 106847043 106847095 -59803201 + B1_Mur1 SINE Alu 97 149 0 4 1400 789 306 123 43 chrX 106848563 106848962 -59801334 + MT2A LTR ERVL 1 431 -102 4 1400 312 27 0 0 chrX 106849037 106849074 -59801222 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1400 444 67 0 0 chrX 106849675 106849735 -59800561 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 1400 369 254 36 67 chrX 106849842 106850036 -59800260 + L1_Mur3 LINE L1 2855 3042 -3101 4 1400 472 287 52 61 chrX 106850013 106850374 -59799922 + L1_Mur3 LINE L1 3647 4001 -2142 4 1400 258 105 0 0 chrX 106850376 106850414 -59799882 + (CAAG)n Simple_repeat Simple_repeat 2 39 0 4 1400 222 191 0 0 chrX 106850477 106850524 -59799772 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 1400 228 67 0 0 chrX 106851886 106851916 -59798380 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1400 757 298 104 27 chrX 106851937 106852272 -59798024 - Lx9 LINE L1 -212 7432 7072 4 1400 414 0 0 0 chrX 106852317 106852363 -59797933 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1400 684 189 0 0 chrX 106852415 106852547 -59797749 + Lx4A LINE L1 6081 6212 -846 4 1400 936 141 25 0 chrX 106852543 106852706 -59797590 + L1_Mm LINE L1 5036 5202 -681 4 1400 23198 152 14 50 chrX 106852704 106857890 -59792406 - L1VL1 LINE L1 -325 5558 555 4 1400 287 219 0 30 chrX 106857898 106857964 -59792332 - MT2A LTR ERVL -467 66 3 4 1400 213 91 71 18 chrX 106858115 106858171 -59792125 + (TA)n Simple_repeat Simple_repeat 2 60 0 4 1400 1438 231 37 39 chrX 106858303 106858686 -59791610 - ORR1C2 LTR MaLR -2 382 1 4 1400 447 19 0 0 chrX 106859093 106859145 -59791151 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1400 825 229 49 0 chrX 106859468 106859649 -59790647 - RMER15 LTR ERVL -2 573 384 4 1400 3599 187 32 25 chrX 106859649 106859740 -59790556 - RLTR17 LTR ERVK 0 692 593 4 1400 2566 103 37 0 chrX 106859740 106860117 -59790179 - L1_Mus3 LINE L1 0 6638 6248 4 1400 3599 187 32 25 chrX 106860117 106860712 -59789584 - RLTR17 LTR ERVK -100 592 1 4 1400 395 362 21 21 chrX 106860713 106860857 -59789439 - RMER15 LTR ERVL -187 388 245 4 1400 192 85 20 60 chrX 106860863 106860913 -59789383 + T-rich Low_complexity Low_complexity 2 49 0 4 1400 2027 107 3 3 chrX 106860930 106861222 -59789074 + L1_Mus2 LINE L1 6275 6566 0 4 1400 1263 104 5 5 chrX 106861396 106861580 -59788716 - B2_Mm1t SINE B2 -8 185 2 4 1400 5707 227 49 9 chrX 106861639 106862934 -59787362 + MERVL_2A-int LTR ERVL 3030 4376 -1385 4 1400 22 0 0 0 chrX 106863187 106863209 -59787087 + AT_rich Low_complexity Low_complexity 1 22 0 4 1400 8884 153 28 8 chrX 106863268 106865877 -59784419 - Lx4A LINE L1 -1 7057 4386 4 1400 1909 194 16 19 chrX 106867092 106867471 -59782825 + ORR1C1 LTR MaLR 1 378 0 4 1400 21 0 0 0 chrX 106867742 106867763 -59782533 + AT_rich Low_complexity Low_complexity 1 21 0 4 1400 3605 116 32 0 chrX 106867767 106868355 -59781941 - Lx LINE L1 -480 6174 5552 4 1400 4105 219 46 25 chrX 106868355 106869512 -59780784 - L1VL2 LINE L1 -2524 1174 29 4 1400 22 0 0 0 chrX 106869758 106869780 -59780516 + AT_rich Low_complexity Low_complexity 1 22 0 4 1400 31 26 0 0 chrX 106869840 106869878 -59780418 + AT_rich Low_complexity Low_complexity 1 38 0 4 1400 247 281 16 0 chrX 106869904 106869968 -59780328 + L1M5 LINE L1 5518 5582 -658 4 1400 403 198 0 42 chrX 106869977 106870045 -59780251 + ORR1A4 LTR MaLR 1 64 -262 4 1400 1260 186 5 54 chrX 106870045 106870368 -59779928 + ORR1A4 LTR MaLR 1 326 -20 4 1400 2529 223 60 12 chrX 106870386 106870972 -59779324 + Lx2B LINE L1 6374 6987 -13 4 1400 489 132 0 0 chrX 106870972 106871048 -59779248 + ORR1A4 LTR MaLR 254 329 0 4 1400 467 308 92 45 chrX 106871049 106871240 -59779056 + Lx7 LINE L1 5554 5747 -1949 4 1400 468 51 0 0 chrX 106871240 106871299 -59778997 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 1400 467 306 95 44 chrX 106871299 106871433 -59778863 + Lx7 LINE L1 5748 5896 -1800 4 1400 386 39 19 0 chrX 106871933 106871985 -59778311 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 1400 28 0 0 0 chrX 106872579 106872607 -59777689 + AT_rich Low_complexity Low_complexity 1 28 0 4 1400 310 320 0 0 chrX 106872884 106872962 -59777334 - L2 LINE L2 -1037 2382 2305 4 1400 7806 229 48 25 chrX 106873063 106875477 -59774819 - Lx7 LINE L1 0 7696 5225 4 1400 618 264 37 27 chrX 106875477 106875664 -59774632 - ORR1D1 LTR MaLR -185 189 1 4 1400 25624 86 7 7 chrX 106875721 106877155 -59773141 + L1_Mm LINE L1 2051 3488 -2395 4 1400 333 0 0 0 chrX 106877155 106877192 -59773104 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 1400 25624 86 7 7 chrX 106877192 106879382 -59770914 + L1_Mm LINE L1 3489 5674 -209 4 1400 382 233 11 22 chrX 106879438 106879530 -59770766 - RMER5 LTR ERV1 -52 482 392 4 1400 1848 185 21 55 chrX 106879546 106879929 -59770367 + ORR1C1 LTR MaLR 1 370 -8 4 1400 1089 254 63 16 chrX 106879933 106880328 -59769968 + ORR1C1-int LTR MaLR 1 433 -1530 4 1400 1121 198 37 19 chrX 106880328 106880544 -59769752 + ORR1C1 LTR MaLR 157 376 -2 4 1400 792 283 133 67 chrX 106880601 106881136 -59769160 + RLTR40 LTR ERVK 19 588 -229 4 1400 601 274 39 19 chrX 106881266 106881474 -59768822 - B3 SINE B2 -4 212 1 4 1400 3878 153 103 21 chrX 106882232 106883057 -59767239 - RMER17A2 LTR ERVK 0 906 14 4 1400 216 97 0 0 chrX 106883226 106883257 -59767039 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 1400 377 322 94 54 chrX 106883259 106883482 -59766814 - L1MD LINE L1 -679 5680 5449 4 1400 515 286 29 41 chrX 106883600 106883844 -59766452 - L1MD LINE L1 -837 5309 5069 4 1400 1541 79 18 14 chrX 106884092 106884309 -59765987 - L1_Mus1 LINE L1 0 6567 6350 4 1400 523 321 0 0 chrX 106884766 106884906 -59765390 + B1_Mur2 SINE Alu 3 142 -7 4 1400 3039 220 12 9 chrX 106885018 106885582 -59764714 + Lx5 LINE L1 6446 7011 -39 4 1400 513 306 7 7 chrX 106885873 106886011 -59764285 - B1_Mur1 SINE Alu -7 142 5 4 1400 1374 132 0 21 chrX 106886109 106886342 -59763954 - Lx2 LINE L1 -2 6995 6768 4 1400 1583 167 11 0 chrX 106886342 106886605 -59763691 - Lx2 LINE L1 -363 6634 6369 4 1400 417 39 0 0 chrX 106886616 106886667 -59763629 + (TA)n Simple_repeat Simple_repeat 2 52 0 4 1400 733 57 32 16 chrX 106886670 106886795 -59763501 + (TAGA)n Simple_repeat Simple_repeat 2 128 0 4 1400 3630 75 8 16 chrX 106886795 106887298 -59762998 + L1Md_F2 LINE L1 6084 6582 0 4 1400 1216 72 6 0 chrX 106887298 106887465 -59762831 - L1VL1 LINE L1 -2923 2960 2793 4 1400 6236 97 10 34 chrX 106887433 106889238 -59761058 - L1VL1 LINE L1 -3689 2194 441 4 1400 24 0 0 0 chrX 106889322 106889346 -59760950 + AT_rich Low_complexity Low_complexity 1 24 0 5 1400 1188 283 53 13 chrX 106889514 106889969 -59760327 - L1_Mur3 LINE L1 -376 5504 5032 5 1400 4268 216 69 7 chrX 106889973 106891659 -59758637 + Lx7 LINE L1 4939 6737 -959 5 1400 1993 154 0 9 chrX 106892089 106892148 -59758148 - ORR1A2 LTR MaLR -8 319 263 5 1400 3012 89 88 11 chrX 106892148 106892604 -59757692 - Lx LINE L1 -5 6649 6159 5 1400 1993 154 0 9 chrX 106892604 106892866 -59757430 - ORR1A2 LTR MaLR -65 262 1 5 1400 205 98 24 24 chrX 106893047 106893089 -59757207 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 5 1400 222 171 0 0 chrX 106893437 106893478 -59756818 + (CATA)n Simple_repeat Simple_repeat 3 43 0 5 1400 665 242 0 0 chrX 106893987 106894111 -59756185 - B3A SINE B2 -72 126 3 5 1400 1037 288 62 58 chrX 106894373 106895063 -59755233 - L1M2 LINE L1 -1944 4199 3507 5 1400 396 266 133 0 chrX 106895063 106895191 -59755105 - B1_Mur2 SINE Alu 0 149 5 5 1400 237 241 20 130 chrX 106895119 106895219 -59755077 - MT2B LTR ERVL -363 238 150 5 1400 567 261 137 24 chrX 106895220 106895293 -59755003 - L1M2 LINE L1 -2645 3498 3426 5 1400 2442 102 157 2 chrX 106895293 106895753 -59754543 - RLTR47_MM LTR ERV1 -1 531 1 5 1400 567 261 137 24 chrX 106895753 106896189 -59754107 - L1M2 LINE L1 -2718 3425 2931 5 1400 26 74 0 0 chrX 106896189 106896243 -59754053 + AT_rich Low_complexity Low_complexity 1 54 0 5 1400 37 52 0 0 chrX 106896279 106896337 -59753959 + AT_rich Low_complexity Low_complexity 1 58 0 5 1400 21 0 0 0 chrX 106897679 106897700 -59752596 + AT_rich Low_complexity Low_complexity 1 21 0 5 1400 5472 128 66 30 chrX 106897849 106899350 -59750946 + L1Md_A LINE L1 413 1973 -3910 5 1400 35276 46 0 3 chrX 106899357 106904596 -59745700 + L1Md_T LINE L1 271 5589 -297 5 1400 8399 35 0 0 chrX 106904596 106905592 -59744704 + L1Md_T LINE L1 5590 6585 0 5 1400 28532 52 1 0 chrX 106905594 106909204 -59741092 + L1_Mm LINE L1 1976 5586 -297 5 1400 7667 58 9 3 chrX 106909204 106910191 -59740105 + L1Md_F2 LINE L1 5587 6579 -3 5 1400 226 0 0 56 chrX 106910201 106910237 -59740059 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1400 354 186 0 0 chrX 106910467 106910553 -59739743 + CT-rich Low_complexity Low_complexity 2 87 0 5 1400 908 126 7 0 chrX 106910568 106910719 -59739577 + (TTC)n Simple_repeat Simple_repeat 3 154 0 5 1400 1426 271 88 5 chrX 106911302 106911687 -59738609 + MTD LTR MaLR 3 419 0 5 1400 321 26 0 0 chrX 106912548 106912586 -59737710 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 5 1400 24 77 0 0 chrX 106913043 106913095 -59737201 + AT_rich Low_complexity Low_complexity 1 52 0 5 1400 226 333 120 60 chrX 106913281 106913565 -59736731 - ORR1E LTR MaLR 0 359 59 5 1400 281 396 50 15 chrX 106913622 106913822 -59736474 + L2 LINE L2 194 400 -3019 5 1400 494 165 10 0 chrX 106914118 106914221 -59736075 + GA-rich Low_complexity Low_complexity 2 105 0 5 1400 2021 226 126 48 chrX 106914224 106914923 -59735373 - RLTR40 LTR ERVK -64 753 1 5 1400 431 361 34 34 chrX 106915017 106915315 -59734981 + L2 LINE L2 581 878 -2541 5 1400 37 52 0 0 chrX 106915473 106915531 -59734765 + AT_rich Low_complexity Low_complexity 1 58 0 5 1400 315 122 0 0 chrX 106916136 106916185 -59734111 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1400 4432 113 47 1 chrX 106916259 106916943 -59733353 - Lx3_Mus LINE L1 -8 7001 6287 5 1400 452 307 12 105 chrX 106917395 106917566 -59732730 + RSINE1 SINE B4 11 165 0 5 1400 201 175 0 0 chrX 106917567 106917607 -59732689 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1400 231 316 13 0 chrX 106918012 106918091 -59732205 + L1M2 LINE L1 2656 2735 -3408 5 1400 3593 113 2 0 chrX 106918105 106918655 -59731641 + L1_Mm LINE L1 3842 4392 -1491 5 1400 305 289 35 24 chrX 106918881 106918966 -59731330 + PB1D10 SINE Alu 1 86 -31 5 1400 364 189 53 13 chrX 106918969 106919044 -59731252 - MT2A LTR ERVL -157 376 299 5 1400 896 268 43 9 chrX 106919071 106919301 -59730995 - MT2A LTR ERVL -295 238 1 5 1400 1179 276 49 40 chrX 106919754 106920160 -59730136 + MTE2b LTR MaLR 2 405 -14 5 1400 26 50 0 0 chrX 106920736 106920776 -59729520 + AT_rich Low_complexity Low_complexity 1 40 0 5 1400 222 247 0 0 chrX 106920926 106921003 -59729293 + (TA)n Simple_repeat Simple_repeat 1 77 0 5 1400 415 350 40 51 chrX 106921790 106922064 -59728232 + MTE-int LTR MaLR 228 498 -1082 5 1400 215 79 26 0 chrX 106922898 106922936 -59727360 + (CAAAA)n Simple_repeat Simple_repeat 1 39 0 5 1400 449 404 56 39 chrX 106922963 106923249 -59727047 + MTE-int LTR MaLR 1050 1340 -240 5 1400 205 189 62 10 chrX 106923307 106923403 -59726893 + (TATAA)n Simple_repeat Simple_repeat 4 104 0 5 1400 4661 235 81 19 chrX 106923406 106925018 -59725278 - Lx9 LINE L1 -63 7581 5728 5 1400 360 0 0 0 chrX 106925018 106925058 -59725238 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 1400 1596 197 12 18 chrX 106925058 106925278 -59725018 - Lx9 LINE L1 -120 5727 5509 5 1400 1707 280 49 16 chrX 106925303 106925790 -59724506 + Lx8 LINE L1 6969 7471 -2 5 1400 1965 195 40 21 chrX 106925854 106925976 -59724320 - Lx5 LINE L1 -1036 6014 5896 5 1400 4459 101 14 89 chrX 106925976 106926788 -59723508 + RMER17A LTR ERVK 1 751 0 5 1400 1965 195 40 21 chrX 106926788 106927085 -59723211 - Lx5 LINE L1 -1155 5895 5587 5 1400 1102 311 39 28 chrX 106927085 106928035 -59722261 + Lx6 LINE L1 6083 7324 -136 5 1400 305 261 124 50 chrX 106928021 106928182 -59722114 + Lx6 LINE L1 7259 7431 -29 5 1400 26 30 0 0 chrX 106928190 106928223 -59722073 + AT_rich Low_complexity Low_complexity 1 33 0 5 1400 525 344 57 31 chrX 106928233 106928425 -59721871 + B4 SINE B4 95 291 -1 5 1400 420 361 38 0 chrX 106928682 106928815 -59721481 + RSINE1 SINE B4 4 141 -24 5 1400 26 0 0 0 chrX 106928999 106929025 -59721271 + AT_rich Low_complexity Low_complexity 1 26 0 5 1400 4662 61 10 0 chrX 106929342 106929933 -59720363 + L1Md_F2 LINE L1 5986 6582 0 5 1400 297 0 0 0 chrX 106929948 106929981 -59720315 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1400 253 366 64 64 chrX 106931877 106932157 -59718139 - Lx8 LINE L1 -13 7460 7181 5 1400 474 243 18 0 chrX 106932178 106932289 -59718007 + L1_Mur3 LINE L1 3846 3958 -1922 5 1400 22 35 0 0 chrX 106932683 106932712 -59717584 + AT_rich Low_complexity Low_complexity 1 29 0 5 1400 1138 214 155 25 chrX 106934042 106934320 -59715976 - MTD LTR MaLR -2 417 104 5 1400 246 353 61 32 chrX 106934516 106934923 -59715373 - L1M2 LINE L1 -4269 2580 2162 5 1400 1978 237 39 27 chrX 106934937 106935423 -59714873 - Lx5 LINE L1 -5 7045 6554 5 1400 10141 212 51 60 chrX 106935420 106937471 -59712825 - Lx5 LINE L1 -628 6422 4354 5 1400 4494 30 0 0 chrX 106937471 106937997 -59712299 - L1Md_A LINE L1 -3 6579 6054 5 1400 10141 226 74 85 chrX 106937997 106938945 -59711351 - Lx5 LINE L1 -1524 4353 3538 5 1400 1098 95 7 0 chrX 106938945 106939092 -59711204 - B1_Mus1 SINE Alu 0 148 1 5 1400 10141 226 74 85 chrX 106939092 106939391 -59710905 - Lx5 LINE L1 -2340 3537 3269 5 1400 275 0 0 28 chrX 106939391 106939427 -59710869 + (TTTCC)n Simple_repeat Simple_repeat 3 37 0 5 1400 10141 226 74 85 chrX 106939427 106940545 -59709751 - Lx5 LINE L1 -2609 3268 2060 5 1400 297 0 0 0 chrX 106940545 106940578 -59709718 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1400 10141 226 74 85 chrX 106940578 106940958 -59709338 - Lx5 LINE L1 -3818 2059 1667 5 1400 2442 105 3 3 chrX 106940970 106941324 -59708972 - L1_Mus4 LINE L1 -8 6628 6275 5 1400 790 212 93 22 chrX 106941325 106941595 -59708701 - Lx5 LINE L1 -6453 1275 987 5 1400 883 51 167 0 chrX 106942224 106942362 -59707934 + L1_Mus2 LINE L1 6405 6565 -1 5 1400 3304 229 18 9 chrX 106942499 106943116 -59707180 + Lx5 LINE L1 6366 6988 -62 5 1400 519 17 0 0 chrX 106943116 106943176 -59707120 + (GGGA)n Simple_repeat Simple_repeat 4 63 0 5 1400 3304 229 18 9 chrX 106943176 106943235 -59707061 + Lx5 LINE L1 6989 7048 -2 5 1400 318 148 0 0 chrX 106943456 106943510 -59706786 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 1400 529 245 39 0 chrX 106943510 106943665 -59706631 + Lx9 LINE L1 7477 7637 -7 5 1400 1307 309 80 23 chrX 106943874 106944403 -59705893 - Lx9 LINE L1 -684 6960 6396 5 1400 8021 26 2 3 chrX 106944403 106945333 -59704963 - RLTR13B3 LTR ERVK 0 929 1 5 1400 1307 309 80 23 chrX 106945333 106945363 -59704933 - Lx9 LINE L1 -1249 6395 6369 5 1400 609 287 24 19 chrX 106945586 106945799 -59704497 + Lx7 LINE L1 6738 6951 -745 5 1400 654 264 21 43 chrX 106945805 106945991 -59704305 - ORR1B1-int LTR MaLR -1748 215 34 5 1400 9654 32 0 1 chrX 106945991 106947157 -59703139 + L1_Mm LINE L1 3679 4843 -1040 5 1400 1017 242 69 119 chrX 106947164 106947483 -59702813 - ORR1B1 LTR MaLR -51 343 41 5 1400 198 286 61 10 chrX 106947985 106948084 -59702212 + MIRb SINE MIR 60 163 -105 5 1400 26 0 0 0 chrX 106948089 106948115 -59702181 + AT_rich Low_complexity Low_complexity 1 26 0 5 1400 360 302 49 40 chrX 106948364 106948588 -59701708 + Lx9 LINE L1 7232 7457 -187 5 1400 186 103 0 0 chrX 106948588 106948617 -59701679 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1400 6502 132 69 66 chrX 106948823 106950477 -59699819 - L1_Mus3 LINE L1 -11 6627 4864 5 1400 1171 135 10 0 chrX 106950477 106950670 -59699626 + L1Md_F2 LINE L1 6376 6570 -12 5 1400 5322 156 164 151 chrX 106950670 106951485 -59698811 - L1_Mus3 LINE L1 -1020 4863 4139 5 1400 370 121 0 0 chrX 106951480 106951538 -59698758 + L1_Mur2 LINE L1 4025 4082 -1795 5 1400 6440 154 19 16 chrX 106951722 106953444 -59696852 - L1VL4 LINE L1 -1653 1906 183 5 1400 924 297 35 4 chrX 106953701 106953961 -59696335 - Lx8 LINE L1 -292 7181 6914 5 1400 378 328 58 100 chrX 106953963 106954322 -59695974 + L1MD LINE L1 5301 5644 -2351 5 1401 236 369 0 9 chrX 106955429 106955541 -59694755 + PB1D10 SINE Alu 1 111 -6 5 1401 2810 163 40 0 chrX 106957205 106957683 -59692613 - RLTR19 LTR ERVK -2 497 1 5 1401 387 235 52 9 chrX 106957684 106957800 -59692496 - RLTR19-int LTR ERVK -1 6136 6016 5 1401 346 279 92 33 chrX 106957807 106957959 -59692337 - RLTR14-int LTR ERV1 -235 5082 4922 5 1401 437 214 36 0 chrX 106958057 106958141 -59692155 - RLTR19-int LTR ERVK -110 6027 5941 5 1401 2925 90 0 15 chrX 106958141 106958535 -59691761 - L1_Mus2 LINE L1 -80 6486 6099 5 1401 593 138 103 0 chrX 106958535 106958651 -59691645 - RLTR19-int LTR ERVK -2227 3910 3783 5 1401 2841 173 60 0 chrX 106958651 106959170 -59691126 + L1Md_F LINE L1 256 805 -5714 5 1401 8598 67 5 4 chrX 106959176 106960306 -59689990 + L1Md_F3 LINE L1 4455 5585 -298 5 1401 7446 45 63 1 chrX 106960307 106961246 -59689050 + L1Md_F3 LINE L1 5587 6583 -1 5 1401 182 37 37 0 chrX 106961306 106961333 -59688963 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 5 1401 7508 91 3 4 chrX 106961333 106962401 -59687895 + L1_Mm LINE L1 4433 5499 -384 5 1401 37625 42 1 6 chrX 106962413 106968688 -59681608 - L1Md_T LINE L1 0 6585 252 5 1401 343 100 11 91 chrX 106968763 106968851 -59681445 - RLTR19-int LTR ERVK -2625 3512 3432 5 1401 870 102 24 6 chrX 106968851 106968994 -59681302 + Lx3C LINE L1 5698 5836 -1222 5 1401 1178 233 20 3 chrX 106969304 106969597 -59680699 - L1_Rod LINE L1 -1 5846 5549 5 1401 218 280 0 0 chrX 106971498 106971548 -59678748 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1401 492 106 0 0 chrX 106971548 106971633 -59678663 + (GA)n Simple_repeat Simple_repeat 1 85 0 5 1401 1097 329 116 10 chrX 106971686 106972228 -59678068 + RMER1A Other Other 1 418 -612 6 1401 804 341 68 12 chrX 106972404 106972725 -59677571 + Lx8 LINE L1 6277 6615 -858 6 1401 245 258 110 29 chrX 106972780 106972916 -59677380 + Lx8 LINE L1 6716 6862 -611 6 1401 604 355 59 0 chrX 106972979 106973199 -59677097 + Lx8 LINE L1 6970 7202 -271 6 1401 23273 125 22 99 chrX 106973221 106976506 -59673790 - L1_Mus2 LINE L1 -1 6565 3882 6 1401 3254 43 5 0 chrX 106976506 106976900 -59673396 + MTA_Mm LTR MaLR 1 396 0 6 1401 8924 46 2 2 chrX 106976900 106977998 -59672298 + MTA_Mm-int LTR MaLR 1 1098 0 6 1401 3245 41 13 0 chrX 106977998 106978389 -59671907 + MTA_Mm LTR MaLR 1 396 0 6 1401 23273 153 17 125 chrX 106978389 106981976 -59668320 - L1_Mus2 LINE L1 -2002 3881 359 6 1401 234 380 0 12 chrX 106982007 106982087 -59668209 + Lx8 LINE L1 7233 7311 -162 6 1401 352 93 0 0 chrX 106982102 106982156 -59668140 - L1_Mur1 LINE L1 -3296 2590 2537 6 1401 1995 171 69 13 chrX 106982157 106982536 -59667760 + RLTR9D LTR ERVK 2 401 -2 6 1401 5977 269 10 26 chrX 106982543 106984150 -59666146 + ETnERV2-int LTR ERVK 9 1643 -1671 6 1401 495 0 0 0 chrX 106984150 106984205 -59666091 + (TA)n Simple_repeat Simple_repeat 2 56 0 6 1401 14103 228 27 37 chrX 106984205 106988361 -59661935 + ETnERV2-int LTR ERVK 1523 6425 -981 6 1401 343 127 40 40 chrX 106988573 106988647 -59661649 + ETnERV2-int LTR ERVK 7331 7404 -2 6 1401 2032 151 77 19 chrX 106988648 106989027 -59661269 + RLTR9D LTR ERVK 1 401 -2 6 1401 5256 203 16 22 chrX 106989027 106989505 -59660791 - L1_Mur2 LINE L1 -3345 2532 2048 6 1401 351 96 0 0 chrX 106989505 106989557 -59660739 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1401 5256 203 16 22 chrX 106989557 106990354 -59659942 - L1_Mur2 LINE L1 -3830 2047 1265 6 1401 811 145 144 7 chrX 106990370 106990523 -59659773 - B2_Mm2 SINE B2 -21 174 1 6 1401 315 157 155 44 chrX 106990526 106990662 -59659634 - L1_Mur2 LINE L1 -2644 1271 1085 6 1401 4592 94 9 3 chrX 106990700 106991348 -59658948 - L1_Mm LINE L1 -53 5830 5179 6 1401 29803 90 14 8 chrX 106991347 106995858 -59654438 + L1_Mm LINE L1 717 5234 -649 6 1401 189 0 0 0 chrX 106995858 106995879 -59654417 + (TA)n Simple_repeat Simple_repeat 1 21 0 6 1401 29803 92 8 9 chrX 106995879 106996215 -59654081 + L1Md_F2 LINE L1 5235 5586 -297 6 1401 7098 74 24 9 chrX 106996216 106997185 -59653111 + L1Md_F2 LINE L1 5588 6570 -12 6 1401 3856 108 0 0 chrX 106997186 106997731 -59652565 + L1_Mus1 LINE L1 6023 6567 0 6 1401 32 0 0 0 chrX 106997760 106997792 -59652504 + AT_rich Low_complexity Low_complexity 1 32 0 6 1401 882 261 95 104 chrX 106997804 106998264 -59652032 + MT2A LTR ERVL 1 601 0 6 1401 306 164 0 0 chrX 106998785 106998840 -59651456 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1401 21 57 0 0 chrX 107000604 107000639 -59649657 + AT_rich Low_complexity Low_complexity 1 35 0 1 1401 2708 42 53 0 chrX 107000821 107001179 -59649117 + RLTR10 LTR ERVK 1 377 -13 2 1401 2585 150 24 9 chrX 107001220 107001684 -59648612 - Lx LINE L1 -4 6650 6180 3 1401 351 255 65 69 chrX 107001824 107002099 -59648197 + Lx9 LINE L1 5838 6111 -1533 4 1401 226 313 15 0 chrX 107002130 107002197 -59648099 + MTEa LTR MaLR 241 308 -71 5 1401 890 311 23 42 chrX 107002194 107002456 -59647840 + MTE-int LTR MaLR 682 938 -642 6 1401 459 305 126 44 chrX 107002482 107002642 -59647654 + MTD LTR MaLR 6 184 -235 7 1401 1020 221 39 127 chrX 107002642 107003052 -59647244 + ORR1D1 LTR MaLR 1 374 0 8 1401 459 305 126 44 chrX 107003052 107003073 -59647223 + MTD LTR MaLR 185 202 -217 7 1401 502 321 9 2 chrX 107003132 107003266 -59647030 - B4A SINE B4 -90 134 2 9 1401 394 340 15 5 chrX 107003333 107003528 -59646768 - L1M2 LINE L1 -580 5732 5536 1 1401 902 51 36 14 chrX 107003579 107003718 -59646578 - L1Md_F3 LINE L1 -2 6582 6441 1 1401 7968 28 1 0 chrX 107003718 107004660 -59645636 - L1_Mm LINE L1 -256 5627 4685 1 1401 3150 72 2 0 chrX 107004660 107005076 -59645220 + L1Md_F2 LINE L1 6154 6570 -12 1 1401 3340 205 43 58 chrX 107006587 107007486 -59642810 + RMER12 LTR ERVK 49 1136 -186 1 1401 4187 194 0 0 chrX 107007489 107008264 -59642032 - Lx2 LINE L1 -98 5779 5005 1 1401 7157 151 6 13 chrX 107008265 107009456 -59640840 + Lx2 LINE L1 5815 6997 0 1 1401 2057 128 3 0 chrX 107009472 107009801 -59640495 - MusHAL1 LINE L1 -1850 862 533 1 1401 901 89 24 0 chrX 107009800 107009924 -59640372 + L1_Mus4 LINE L1 6059 6185 -451 1 1401 23 78 0 0 chrX 107009987 107010038 -59640258 + AT_rich Low_complexity Low_complexity 1 51 0 1 1401 347 185 18 27 chrX 107010093 107010204 -59640092 + Lx9 LINE L1 7529 7638 -6 1 1401 35 0 0 0 chrX 107010525 107010560 -59639736 + AT_rich Low_complexity Low_complexity 1 35 0 2 1401 766 289 34 20 chrX 107011465 107011822 -59638474 - L1M2 LINE L1 -873 5270 4909 1 1401 1315 170 54 4 chrX 107011824 107012066 -59638230 - MTC LTR MaLR -167 254 1 2 1401 311 307 119 12 chrX 107012070 107012406 -59637890 - L1M2 LINE L1 -2272 3868 3497 1 1401 529 325 121 31 chrX 107012479 107012959 -59637337 - L1M2 LINE L1 -2698 3445 2923 1 1401 210 330 0 9 chrX 107013277 107013384 -59636912 + GA-rich Low_complexity Low_complexity 2 107 0 2 1401 263 149 60 0 chrX 107013502 107013569 -59636727 - SYNREP_MM Satellite Satellite -20 246 176 2 1401 327 107 54 0 chrX 107013507 107013563 -59636733 - CENSAT_MC Satellite centr -1 59 1 2 1401 3015 107 5 0 chrX 107013591 107014128 -59636168 - L1_Mus3 LINE L1 -627 6011 5470 2 1401 3396 79 108 19 chrX 107014128 107014646 -59635650 - LTRIS2 LTR ERV1 0 564 1 2 1401 932 232 26 0 chrX 107014647 107014875 -59635421 - RLTR1B-int LTR ERV1 -42 5021 4788 2 1401 6975 167 57 65 chrX 107014866 107017198 -59633098 - RLTR1B-int LTR ERV1 -792 4271 1139 2 1401 567 299 78 70 chrX 107017254 107017524 -59632772 + RLTR10A LTR ERVK 140 411 0 2 1401 989 137 53 6 chrX 107017711 107017880 -59632416 + RMER16-int LTR ERVK 141 317 -5089 2 1401 2639 110 13 8 chrX 107017874 107018269 -59632027 + RMER16-int LTR ERVK 692 1088 -4318 2 1401 2835 64 0 0 chrX 107018269 107018615 -59631681 + ORR1A1 LTR MaLR 1 346 0 3 1401 11192 70 7 1 chrX 107018615 107020146 -59630150 + ORR1A1-int LTR MaLR 1 1540 -252 3 1401 297 78 14 0 chrX 107020146 107020196 -59630100 - L1_Mm LINE L1 -487 5396 5343 3 1401 41100 6 0 0 chrX 107020196 107026794 -59623502 - L1Md_A LINE L1 0 6582 37 3 1401 234 0 0 0 chrX 107026795 107026821 -59623475 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1401 3415 179 10 6 chrX 107026821 107027500 -59622796 - L1_Mm LINE L1 -521 5362 4681 3 1401 4794 114 20 48 chrX 107027596 107028224 -59622072 - RLTR13C2 LTR ERVK 0 808 199 3 1401 1171 75 0 0 chrX 107028224 107028371 -59621925 - B1_Mm SINE Alu 0 147 1 3 1401 4794 114 20 48 chrX 107028371 107028542 -59621754 - RLTR13C2 LTR ERVK -610 198 31 3 1401 21 57 0 0 chrX 107028653 107028688 -59621608 + AT_rich Low_complexity Low_complexity 1 35 0 3 1401 488 222 19 0 chrX 107029106 107029214 -59621082 + MTC LTR MaLR 1 110 -311 3 1401 775 189 27 7 chrX 107029235 107029384 -59620912 + MTC LTR MaLR 268 419 -2 3 1401 33831 29 0 0 chrX 107029584 107033639 -59616657 + L1Md_T LINE L1 1532 5586 -297 3 1401 7984 57 0 0 chrX 107033639 107034693 -59615603 + L1Md_T LINE L1 5587 6582 0 3 1401 22 0 0 0 chrX 107034698 107034720 -59615576 + AT_rich Low_complexity Low_complexity 1 22 0 3 1401 197 256 0 12 chrX 107035822 107035905 -59614391 + (TA)n Simple_repeat Simple_repeat 2 83 0 4 1401 1215 22 0 0 chrX 107036079 107036218 -59614078 + B1_Mm SINE Alu 2 140 -7 4 1401 189 0 0 0 chrX 107036220 107036241 -59614055 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1401 361 286 77 12 chrX 107036760 107036930 -59613366 + L1ME2z LINE L1 5691 5871 -573 4 1401 22 56 0 0 chrX 107038557 107038593 -59611703 + AT_rich Low_complexity Low_complexity 1 36 0 4 1401 1509 227 19 112 chrX 107039002 107039413 -59610883 + RMER15 LTR ERVL 1 373 -202 4 1401 23 54 0 0 chrX 107041430 107041467 -59608829 + AT_rich Low_complexity Low_complexity 1 37 0 4 1401 307 337 47 0 chrX 107041600 107041686 -59608610 + B1F SINE Alu 2 91 -58 4 1401 703 278 92 35 chrX 107041927 107042330 -59607966 + L1_Rod LINE L1 1317 1742 -4105 4 1401 1144 262 57 0 chrX 107042343 107042622 -59607674 - ORR1D2 LTR MaLR 0 370 76 4 1401 1399 236 41 16 chrX 107042749 107043115 -59607181 + Lx2B LINE L1 6621 6995 -5 5 1401 2772 95 12 22 chrX 107043194 107043605 -59606691 - L1_Mus1 LINE L1 -2 6565 6159 5 1401 917 102 0 0 chrX 107043605 107043732 -59606564 + L1_Mus1 LINE L1 6041 6167 -400 5 1401 256 327 51 0 chrX 107043799 107043898 -59606398 + Lx7 LINE L1 5586 5704 -1992 5 1401 589 296 0 0 chrX 107043883 107044052 -59606244 - Lx7 LINE L1 -337 7359 7191 5 1401 1649 247 98 6 chrX 107044103 107044698 -59605598 - Lx7 LINE L1 -1789 5907 5257 5 1401 1208 167 5 0 chrX 107044835 107045045 -59605251 - Lx2 LINE L1 -11 6986 6776 5 1401 3659 139 32 82 chrX 107045045 107045213 -59605083 - RMER17A LTR ERVK 0 751 593 5 1401 252 0 0 0 chrX 107045213 107045241 -59605055 + (TGGGGG)n Simple_repeat Simple_repeat 2 29 0 5 1401 3659 139 32 82 chrX 107045241 107045863 -59604433 - RMER17A LTR ERVK -159 592 1 5 1401 1234 154 0 0 chrX 107045868 107046056 -59604240 - Lx2 LINE L1 -352 6645 6458 5 1401 2580 237 32 52 chrX 107046055 107046900 -59603396 + L1_Mus2 LINE L1 5738 6565 -1 5 1401 733 140 3 40 chrX 107048649 107048777 -59601519 - L1_Mus3 LINE L1 -127 6511 6363 5 1401 470 191 8 42 chrX 107048770 107048890 -59601406 + L1_Mur2 LINE L1 4633 4748 -1129 5 1401 23147 84 18 48 chrX 107048857 107052784 -59597512 + L1Md_F2 LINE L1 2342 6138 -444 6 1401 779 99 0 0 chrX 107052770 107052881 -59597415 + L1_Mm LINE L1 5360 5470 -413 6 1401 1368 115 9 0 chrX 107052881 107053099 -59597197 + L1Md_F2 LINE L1 6360 6579 -3 6 1401 1967 217 130 26 chrX 107053111 107053314 -59596982 + L1_Mus3 LINE L1 5162 5371 -512 6 1401 687 25 0 0 chrX 107053314 107053395 -59596901 + (TTTC)n Simple_repeat Simple_repeat 3 83 0 6 1401 5487 121 38 5 chrX 107053395 107054354 -59595942 + L1_Mus3 LINE L1 5372 6405 -233 6 1401 783 291 23 20 chrX 107054645 107054950 -59595346 + Lx7 LINE L1 5883 6188 -1508 6 1401 6178 131 18 32 chrX 107054951 107056054 -59594242 - L1_Mur1 LINE L1 -573 5313 4226 6 1401 2048 114 26 3 chrX 107056064 107056373 -59593923 + L1_Mus2 LINE L1 6250 6565 -1 6 1401 207 0 0 0 chrX 107056376 107056399 -59593897 + (CAT)n Simple_repeat Simple_repeat 2 24 0 6 1401 384 132 15 0 chrX 107056413 107056481 -59593815 - L1_Mur1 LINE L1 -1644 4242 4174 6 1401 8053 141 15 25 chrX 107056479 107058129 -59592167 + Lx3B LINE L1 5320 6951 -22 6 1401 999 249 111 14 chrX 107058127 107058478 -59591818 + Lx7 LINE L1 6174 6558 -1138 6 1401 443 196 40 30 chrX 107058531 107058631 -59591665 - MT2A LTR ERVL -432 101 1 6 1401 618 289 95 0 chrX 107058631 107058817 -59591479 - MTD LTR MaLR -38 381 178 7 1401 28219 123 8 15 chrX 107058818 107064304 -59585992 - L1_Mus2 LINE L1 -182 6384 928 7 1401 3834 55 0 2 chrX 107064304 107064781 -59585515 - L1Md_F2 LINE L1 0 6582 6107 7 1401 2420 229 97 48 chrX 107064781 107065420 -59584876 - L1_Mus2 LINE L1 -5690 948 245 7 1401 186 279 0 32 chrX 107065545 107065608 -59584688 - L3 LINE CR1 -2082 2407 2347 7 1401 35692 49 1 16 chrX 107066296 107071470 -59578826 + L1Md_A LINE L1 496 5586 -297 7 1401 8490 31 0 0 chrX 107071470 107072464 -59577832 + L1Md_A LINE L1 5587 6580 -2 7 1401 326 349 80 48 chrX 107072676 107072965 -59577331 + L1M4 LINE L1 3584 3881 -2265 7 1401 2620 217 46 23 chrX 107073101 107074020 -59576276 + Lx5 LINE L1 5404 6361 -689 7 1401 894 392 31 45 chrX 107074058 107074571 -59575725 + Lx5 LINE L1 6508 7013 -37 7 1401 318 50 0 0 chrX 107074579 107074619 -59575677 + (GGGA)n Simple_repeat Simple_repeat 2 41 0 7 1401 851 228 139 88 chrX 107075486 107075780 -59574516 - ORR1B1 LTR MaLR -39 355 47 7 1401 228 217 30 149 chrX 107075878 107076046 -59574250 + L1M2 LINE L1 4671 4818 -1325 7 1401 29 28 0 0 chrX 107076086 107076122 -59574174 + AT_rich Low_complexity Low_complexity 1 36 0 8 1401 229 341 0 34 chrX 107076255 107076434 -59573862 + L1M2 LINE L1 4980 5152 -991 7 1401 3631 208 45 17 chrX 107076445 107077229 -59573067 + RLTR40 LTR ERVK 1 806 -11 8 1401 29 0 0 0 chrX 107077318 107077347 -59572949 + AT_rich Low_complexity Low_complexity 1 29 0 8 1401 1567 239 134 7 chrX 107077355 107077810 -59572486 + RMER5 LTR ERV1 13 525 -9 8 1401 3900 173 20 92 chrX 107077811 107078651 -59571645 - Lx2B LINE L1 -11 6989 6210 8 1401 393 75 0 0 chrX 107078700 107078753 -59571543 + (TG)n Simple_repeat Simple_repeat 1 53 0 8 1401 237 273 0 0 chrX 107079050 107079116 -59571180 + L1M2 LINE L1 5662 5727 -573 7 1401 397 300 11 5 chrX 107079596 107079785 -59570511 + L1M2 LINE L1 2996 3194 -2946 8 1401 288 282 0 0 chrX 107080030 107080115 -59570181 + L1M2 LINE L1 3342 3426 -2717 8 1401 4700 257 50 8 chrX 107080129 107081388 -59568908 + L1_Mur3 LINE L1 20 896 -6832 8 1401 441 0 0 0 chrX 107081388 107081437 -59568859 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1401 492 18 0 0 chrX 107081438 107081495 -59568801 + (GA)n Simple_repeat Simple_repeat 1 57 0 8 1401 4700 247 60 10 chrX 107081495 107081843 -59568453 + L1_Mur3 LINE L1 897 1260 -6468 8 1401 1449 22 22 5 chrX 107081843 107082028 -59568268 + L1Md_F3 LINE L1 6397 6584 0 9 1401 4700 247 60 10 chrX 107082028 107082061 -59568235 + L1_Mur3 LINE L1 1261 1288 -6440 8 1401 2723 202 22 8 chrX 107082070 107082668 -59567628 + L1_Mur3 LINE L1 3695 4300 -1580 8 1401 5833 115 17 10 chrX 107082689 107083934 -59566362 + L1VL4 LINE L1 52 1305 -2254 9 175 6439 215 75 172 chrX 107083939 107086181 -59564115 + Lx7 LINE L1 2932 4826 -1054 9 1402 213 39 0 0 chrX 107086181 107086207 -59564089 + (TTG)n Simple_repeat Simple_repeat 2 27 0 9 1402 6439 216 66 144 chrX 107086207 107087513 -59562783 + Lx7 LINE L1 4827 6166 -1530 9 1402 420 55 0 0 chrX 107087513 107087568 -59562728 + (CA)n Simple_repeat Simple_repeat 2 56 0 9 1402 2724 221 34 38 chrX 107087568 107087753 -59562543 + Lx7 LINE L1 6167 6345 -1351 9 1402 828 285 65 17 chrX 107087860 107088276 -59562020 - Lx9 LINE L1 -1618 6026 5550 9 1402 784 181 62 92 chrX 107088285 107088480 -59561816 - B2_Mm2 SINE B2 -5 190 2 9 1402 820 270 171 31 chrX 107088486 107088971 -59561325 - Lx9 LINE L1 -302 5545 4993 9 1402 282 357 89 32 chrX 107089113 107089359 -59560937 - MLT1D LTR MaLR -219 286 27 9 1402 779 142 0 23 chrX 107090304 107090434 -59559862 + B1_Mus1 SINE Alu 10 136 -12 9 1402 333 0 0 0 chrX 107090435 107090472 -59559824 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 9 1402 1087 90 18 18 chrX 107090475 107090644 -59559652 + L1_Mus1 LINE L1 6399 6567 0 1 1402 228 221 63 0 chrX 107090828 107090923 -59559373 + (TA)n Simple_repeat Simple_repeat 2 102 0 1 1402 308 303 61 0 chrX 107090933 107091032 -59559264 - PB1D9 SINE Alu -5 115 11 1 1402 956 70 7 0 chrX 107093335 107093477 -59556819 + (TG)n Simple_repeat Simple_repeat 2 144 0 1 1402 357 296 0 0 chrX 107093526 107093597 -59556699 - B3 SINE B2 -98 118 48 1 1402 619 341 28 0 chrX 107094119 107094301 -59555995 - B3A SINE B2 0 198 12 1 1402 468 0 0 0 chrX 107094656 107094708 -59555588 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1402 262 328 30 23 chrX 107094998 107095129 -59555167 + MER33 DNA MER1_type 15 146 -178 1 1402 445 229 18 18 chrX 107095789 107095900 -59554396 + B1_Mus1 SINE Alu 33 143 -5 1 1402 924 27 0 0 chrX 107095900 107096011 -59554285 + (GGAA)n Simple_repeat Simple_repeat 3 113 0 1 1402 30 0 0 0 chrX 107096026 107096056 -59554240 + AT_rich Low_complexity Low_complexity 1 30 0 1 1402 273 315 21 7 chrX 107096604 107096748 -59553548 + L1M3 LINE L1 5675 5820 -360 1 1402 1338 277 33 11 chrX 107096996 107097357 -59552939 - ORR1D1 LTR MaLR -3 371 3 1 1402 465 339 71 6 chrX 107097368 107097537 -59552759 + B4A SINE B4 113 292 0 1 1402 203 281 0 0 chrX 107097544 107097601 -59552695 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 1 1402 3286 268 85 4 chrX 107097808 107098761 -59551535 - Lx6 LINE L1 -11 7449 6420 1 1402 3249 67 26 0 chrX 107098882 107099312 -59550984 - L1Md_F2 LINE L1 -2 6580 6140 1 1402 237 338 31 18 chrX 107099610 107099773 -59550523 - L1MB8 LINE L1 -189 5989 5825 1 1402 21 36 0 0 chrX 107099776 107099804 -59550492 + AT_rich Low_complexity Low_complexity 1 28 0 1 1402 3240 285 62 51 chrX 107099804 107100988 -59549308 - RMER1A Other Other -14 1016 5 1 1402 308 341 71 39 chrX 107101235 107101536 -59548760 - L1MA4 LINE L1 -402 5898 5586 1 1402 498 33 0 0 chrX 107101536 107101596 -59548700 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 1 1402 308 341 71 39 chrX 107101596 107101812 -59548484 - L1MA4 LINE L1 -715 5585 5364 1 1402 1396 290 47 18 chrX 107101857 107102243 -59548053 - MTD LTR MaLR -3 416 20 1 1402 321 193 11 57 chrX 107102310 107102398 -59547898 + L1_Rod LINE L1 2467 2550 -3297 1 1402 1363 239 85 9 chrX 107102409 107102738 -59547558 - ORR1B2 LTR MaLR -13 354 1 1 1402 3286 193 59 52 chrX 107102738 107103519 -59546777 - ORR1B2-int LTR MaLR 0 1509 724 1 1402 310 282 0 0 chrX 107103511 107103582 -59546714 - ORR1B2 LTR MaLR -296 71 1 1 1402 408 40 0 0 chrX 107103621 107103671 -59546625 + (CATA)n Simple_repeat Simple_repeat 2 51 0 1 1402 297 0 0 0 chrX 107103671 107103703 -59546593 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1402 3162 93 0 0 chrX 107103847 107104279 -59546017 + L1Md_F2 LINE L1 5161 5592 -291 1 1402 6801 87 17 13 chrX 107104283 107105261 -59545035 + L1Md_F2 LINE L1 5597 6578 -4 1 1402 21 0 0 0 chrX 107105262 107105283 -59545013 + AT_rich Low_complexity Low_complexity 1 21 0 1 1402 273 237 21 0 chrX 107107399 107107496 -59542800 + Lx9 LINE L1 7545 7643 -1 1 1402 236 262 48 10 chrX 107107720 107107824 -59542472 - L1MA4 LINE L1 -2103 4040 3933 1 1402 312 312 0 59 chrX 107107861 107107963 -59542333 - B1F1 SINE Alu -8 141 46 1 1402 246 333 17 55 chrX 107108074 107108309 -59541987 - L1MA4 LINE L1 -2298 3845 3620 1 1402 469 110 0 40 chrX 107108321 107108397 -59541899 - B2_Mm2 SINE B2 -122 73 1 1 1402 363 23 0 0 chrX 107108524 107108568 -59541728 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1402 251 294 134 0 chrX 107108570 107108689 -59541607 - Lx9 LINE L1 -747 6897 6763 1 1402 518 346 42 18 chrX 107108841 107109192 -59541104 - Lx8 LINE L1 -352 7292 6889 1 1402 445 315 117 50 chrX 107109334 107109615 -59540681 - L1M4 LINE L1 -2452 3694 3395 1 1402 376 319 53 37 chrX 107109631 107109930 -59540366 + L1M2 LINE L1 5387 5690 -610 1 1402 462 299 45 0 chrX 107109930 107110064 -59540232 + B1_Mur1 SINE Alu 1 140 -9 1 1402 21 36 0 0 chrX 107110460 107110488 -59539808 + AT_rich Low_complexity Low_complexity 1 28 0 1 1402 1056 53 20 7 chrX 107110557 107110709 -59539587 - L1Md_F3 LINE L1 -2 6582 6429 1 1402 213 132 0 0 chrX 107110810 107110848 -59539448 + (ATG)n Simple_repeat Simple_repeat 2 39 0 1 1402 225 83 0 0 chrX 107112158 107112194 -59538102 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1402 1697 256 138 20 chrX 107112225 107112719 -59537577 - Lx6 LINE L1 -337 7123 6572 1 1402 824 308 18 11 chrX 107113318 107113556 -59536740 - MTE2a LTR MaLR -144 235 1 1 1402 8098 175 15 76 chrX 107113560 107115486 -59534810 - MusHAL1 LINE L1 -904 1808 1 1 1402 1608 122 59 0 chrX 107115483 107115754 -59534542 - L1_Mur1 LINE L1 -5845 1137 851 1 1402 9311 106 20 2 chrX 107115753 107117408 -59532888 + Lx3_Mus LINE L1 5316 7000 -9 1 1402 231 61 0 0 chrX 107117408 107117441 -59532855 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 1 1402 198 0 0 0 chrX 107117753 107117775 -59532521 + (TTTTC)n Simple_repeat Simple_repeat 3 24 0 1 1402 1035 77 28 0 chrX 107117776 107117919 -59532377 - B1_Mus2 SINE Alu 0 147 1 1 1402 31 0 0 0 chrX 107117944 107117975 -59532321 + AT_rich Low_complexity Low_complexity 1 31 0 1 1402 1450 197 59 46 chrX 107118296 107118669 -59531627 + RLTR1B LTR ERV1 135 512 0 1 1402 1926 147 0 58 chrX 107119183 107119530 -59530766 - ORR1A2 LTR MaLR 0 327 1 1 1402 7063 178 58 20 chrX 107119530 107121030 -59529266 - ORR1A2-int LTR MaLR 0 1792 236 1 1402 180 0 0 0 chrX 107121030 107121050 -59529246 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1402 22168 181 21 12 chrX 107121364 107125119 -59525177 + Lx2A LINE L1 856 4672 -1214 1 1402 197 0 71 0 chrX 107125119 107125147 -59525149 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 1402 22168 163 16 27 chrX 107125147 107127521 -59522775 + Lx2A LINE L1 4673 6997 -11 1 1402 513 47 0 0 chrX 107127521 107127585 -59522711 + (GGAAA)n Simple_repeat Simple_repeat 2 65 0 1 1402 2578 199 64 15 chrX 107127593 107128023 -59522273 + RLTR20D LTR ERVK 7 461 -107 1 1402 1056 16 0 0 chrX 107128023 107128145 -59522151 + (TC)n Simple_repeat Simple_repeat 2 123 0 1 1402 351 0 0 0 chrX 107128145 107128183 -59522113 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1402 2578 199 64 15 chrX 107128183 107128286 -59522010 + RLTR20D LTR ERVK 462 566 -2 1 1402 1115 132 82 0 chrX 107128286 107128466 -59521830 - ORR1A2-int LTR MaLR -1768 195 1 1 1402 1822 128 17 111 chrX 107128470 107128822 -59521474 - ORR1A2 LTR MaLR -8 319 1 1 1402 1828 202 19 27 chrX 107130797 107131207 -59519089 - RLTR21 LTR ERVK -13 1559 749 1 1402 1052 103 0 0 chrX 107131207 107131363 -59518933 - L1_Mm LINE L1 -1587 4296 4141 1 1402 549 104 0 0 chrX 107131365 107131442 -59518854 + RLTR21 LTR ERVK 797 873 -699 1 1402 10048 98 13 3 chrX 107131442 107133667 -59516629 + L1_Mus1 LINE L1 4317 6567 0 1 1402 229 235 0 38 chrX 107133736 107133789 -59516507 + MTE2a LTR MaLR 6 56 -323 1 1402 4797 13 0 0 chrX 107133851 107134420 -59515876 - L1Md_T LINE L1 0 6582 6046 1 1402 5114 18 0 30 chrX 107134484 107135119 -59515177 - L1_Mm LINE L1 -2037 3846 3231 1 1402 344 281 83 30 chrX 107135160 107135292 -59515004 + MTE2a-int LTR MaLR 1442 1580 0 1 1402 642 318 131 49 chrX 107135292 107135642 -59514654 + MTE2a LTR MaLR 1 379 0 1 1402 271 249 45 9 chrX 107135642 107135801 -59514495 + L1M3b LINE L1 1654 1739 -4542 1 1402 1915 215 18 32 chrX 107135805 107136243 -59514053 + L1_Rod LINE L1 5314 5745 -102 1 1402 1406 201 16 81 chrX 107136246 107136451 -59513845 + RMER17C LTR ERVK 5 200 -210 1 1402 504 0 0 0 chrX 107136451 107136507 -59513789 + (TC)n Simple_repeat Simple_repeat 2 57 0 1 1402 1406 201 16 81 chrX 107136507 107136735 -59513561 + RMER17C LTR ERVK 201 410 0 1 1402 2352 217 70 37 chrX 107136736 107137324 -59512972 + RMER17C-int LTR ERVK 1 607 -2631 1 1402 348 82 0 0 chrX 107137324 107137373 -59512923 - Lx LINE L1 -336 6318 6270 1 1402 294 50 0 0 chrX 107137378 107137418 -59512878 + (TTTTG)n Simple_repeat Simple_repeat 4 43 0 1 1402 1237 34 0 0 chrX 107137418 107137565 -59512731 - B1_Mus2 SINE Alu 0 147 1 1 1402 966 145 6 26 chrX 107137565 107137721 -59512575 - Lx2 LINE L1 -363 6634 6482 1 1402 1044 159 89 5 chrX 107137714 107137904 -59512392 + Lx LINE L1 6437 6642 -12 1 1402 309 100 133 0 chrX 107139014 107139074 -59511222 + RMER17C-int LTR ERVK 1277 1344 -1894 1 1402 339 44 22 0 chrX 107139078 107139123 -59511173 + RMER17C-int LTR ERVK 1488 1533 -1705 1 1402 207 0 0 0 chrX 107139126 107139149 -59511147 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1402 870 83 0 0 chrX 107139149 107139268 -59511028 + (TA)n Simple_repeat Simple_repeat 2 121 0 1 1402 3033 131 145 20 chrX 107139280 107139840 -59510456 + RMER17C-int LTR ERVK 1596 2225 -1013 1 1402 315 318 42 21 chrX 107139851 107140044 -59510252 - L1M2 LINE L1 -839 5304 5108 1 1402 207 114 0 0 chrX 107140154 107140189 -59510107 + (TTTTC)n Simple_repeat Simple_repeat 5 39 0 1 1402 2183 237 33 13 chrX 107140526 107141048 -59509248 + Lx9 LINE L1 6933 7464 -180 1 1402 16583 168 71 21 chrX 107141047 107144152 -59506144 + L1_Mur1 LINE L1 1973 5246 -640 1 1402 858 47 0 0 chrX 107144152 107144259 -59506037 + (TA)n Simple_repeat Simple_repeat 2 108 0 1 1402 16583 168 71 21 chrX 107144259 107144597 -59505699 + L1_Mur1 LINE L1 5247 5588 -298 1 1402 7374 72 10 1 chrX 107144598 107145568 -59504728 + L1Md_F2 LINE L1 5587 6565 -17 1 1402 23 0 0 0 chrX 107145568 107145591 -59504705 + AT_rich Low_complexity Low_complexity 1 23 0 1 1402 908 139 56 41 chrX 107145600 107145795 -59504501 - L1_Mur1 LINE L1 -3370 2516 2319 1 1402 657 171 8 0 chrX 107145786 107145909 -59504387 + L1_Mur1 LINE L1 4745 4868 -1018 1 1402 423 0 0 0 chrX 107145955 107146002 -59504294 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1 1402 528 81 0 0 chrX 107146059 107146133 -59504163 + (TTTC)n Simple_repeat Simple_repeat 2 75 0 1 1402 604 295 55 14 chrX 107146284 107146504 -59503792 + MTE-int LTR MaLR 1322 1550 -30 1 1402 633 147 8 76 chrX 107146702 107146820 -59503476 + MMVL30-int LTR ERV1 1358 1467 -2231 1 1402 575 110 0 0 chrX 107146878 107146960 -59503336 + MuRRS4-int LTR ERV1 949 1030 -2269 1 1402 7319 131 70 44 chrX 107147003 107149161 -59501135 + MuRRS4-int LTR ERV1 1140 3698 0 1 1402 1479 222 52 85 chrX 107149161 107149646 -59500650 + RLTR1B LTR ERV1 1 512 0 1 1402 28 0 0 0 chrX 107150288 107150316 -59499980 + AT_rich Low_complexity Low_complexity 1 28 0 1 1402 368 106 30 0 chrX 107150389 107150455 -59499841 + (CATA)n Simple_repeat Simple_repeat 1 68 0 1 1402 268 190 0 25 chrX 107150488 107150569 -59499727 + (TA)n Simple_repeat Simple_repeat 1 79 0 1 1402 4412 147 4 10 chrX 107150837 107151609 -59498687 + L1_Mus2 LINE L1 4176 4942 -941 1 1402 6170 111 18 21 chrX 107151612 107152554 -59497742 + L1_Mus2 LINE L1 5628 6566 0 1 1402 6551 114 19 13 chrX 107152552 107153622 -59496674 - L1_Mur1 LINE L1 -2702 3184 2109 1 1402 8220 132 17 7 chrX 107153649 107155990 -59494306 + Lx3A LINE L1 4602 6966 -15 1 1402 444 37 0 0 chrX 107155990 107156044 -59494252 + (TAAA)n Simple_repeat Simple_repeat 1 54 0 2 1402 4413 36 4 4 chrX 107156470 107157003 -59493293 + L1Md_F2 LINE L1 6050 6582 0 2 1402 1069 339 87 36 chrX 107157667 107159182 -59491114 + L1MA6 LINE L1 4268 5937 -363 2 1402 7142 152 28 13 chrX 107159491 107160724 -59489572 - Lx2 LINE L1 -2 6995 5744 2 1402 42 20 0 0 chrX 107161203 107161252 -59489044 + AT_rich Low_complexity Low_complexity 1 49 0 2 1402 396 186 59 0 chrX 107161407 107161525 -59488771 - Lx9 LINE L1 -17 7627 7503 2 1402 507 203 47 8 chrX 107161529 107161658 -59488638 + L1_Rod LINE L1 5292 5425 -422 2 1402 6142 117 31 4 chrX 107162054 107163016 -59487280 + Lx3_Mus LINE L1 6020 7007 -2 2 1402 253 284 76 29 chrX 107163113 107163218 -59487078 + MIR SINE MIR 109 218 -44 2 1402 613 307 25 10 chrX 107164231 107164432 -59485864 - B3 SINE B2 -12 204 1 2 1402 307 281 10 0 chrX 107165004 107165100 -59485196 + CT-rich Low_complexity Low_complexity 2 98 0 2 1402 28 0 0 0 chrX 107165792 107165820 -59484476 + AT_rich Low_complexity Low_complexity 1 28 0 2 1402 279 128 0 0 chrX 107166303 107166318 -59483978 + (TA)n Simple_repeat Simple_repeat 1 15 0 2 1402 420 55 0 0 chrX 107166318 107166373 -59483923 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1402 279 128 0 0 chrX 107166373 107166404 -59483892 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 1402 883 253 161 0 chrX 107167133 107167486 -59482810 - Lx9 LINE L1 -618 7026 6617 2 1402 1613 229 71 0 chrX 107167483 107167890 -59482406 + Lx9 LINE L1 7049 7484 -160 2 1402 772 62 0 0 chrX 107167902 107168014 -59482282 + L1Md_T LINE L1 6470 6581 -1 2 1402 510 191 29 7 chrX 107168031 107168168 -59482128 + Lx9 LINE L1 7505 7644 0 2 1402 267 349 52 44 chrX 107168231 107168366 -59481930 + B3 SINE B2 76 211 -5 2 1402 220 250 17 0 chrX 107168527 107168587 -59481709 + (TA)n Simple_repeat Simple_repeat 2 62 0 2 1402 324 257 93 0 chrX 107168655 107168795 -59481501 - L1MA6 LINE L1 -10 6290 6138 2 1402 3488 182 28 92 chrX 107168797 107169576 -59480720 + L1VL2 LINE L1 66 794 -5541 2 1402 6950 105 25 0 chrX 107169565 107170921 -59479375 + L1_Mus1 LINE L1 5161 6566 -1 2 1402 28 48 0 0 chrX 107171189 107171231 -59479065 + AT_rich Low_complexity Low_complexity 1 42 0 2 1402 342 138 0 0 chrX 107171301 107171359 -59478937 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 1402 234 239 0 0 chrX 107171425 107171471 -59478825 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1402 305 343 31 88 chrX 107171471 107171663 -59478633 - B4A SINE B4 0 292 112 2 1402 29 101 0 0 chrX 107172012 107172111 -59478185 + AT_rich Low_complexity Low_complexity 1 99 0 2 1402 275 367 49 24 chrX 107172132 107172255 -59478041 - ID_B1 SINE B4 -5 219 94 2 1402 213 39 0 0 chrX 107172880 107172906 -59477390 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1402 41157 7 0 1 chrX 107172935 107179904 -59470392 - L1Md_A LINE L1 0 6582 1 2 1402 1232 160 0 5 chrX 107180084 107180291 -59470005 - Lx2 LINE L1 -7 6990 6785 2 1402 2467 169 2 2 chrX 107180291 107180694 -59469602 - Lx2 LINE L1 -353 6644 6242 2 1402 4619 202 23 2 chrX 107180690 107181645 -59468651 + Lx2 LINE L1 4867 5841 -42 2 1402 1892 134 0 0 chrX 107181631 107181914 -59468382 + L1Md_F2 LINE L1 378 660 -5956 2 1402 32704 96 5 0 chrX 107181897 107182718 -59467578 + L1Md_F2 LINE L1 1139 1961 -3922 2 1402 321 82 0 0 chrX 107182718 107182767 -59467529 + (CAAA)n Simple_repeat Simple_repeat 3 51 0 2 1402 32704 89 4 0 chrX 107182767 107187091 -59463205 + L1Md_F2 LINE L1 1962 6305 -277 2 1402 2505 164 7 4 chrX 107187090 107187547 -59462749 + Lx2 LINE L1 5780 6242 -755 2 1402 186 43 0 0 chrX 107187708 107187731 -59462565 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2 1402 974 301 67 16 chrX 107187731 107188307 -59461989 - L1MA4A LINE L1 -430 5873 5236 2 1402 265 291 43 62 chrX 107188675 107188836 -59461460 + RMER15 LTR ERVL 321 478 -97 2 1402 40582 74 3 25 chrX 107190111 107195586 -59454710 + IAP-d-int LTR ERVK 1191 6542 0 2 1402 2258 99 41 60 chrX 107195586 107195952 -59454344 + RLTR10D LTR ERVK 1 359 0 2 1402 1650 281 33 58 chrX 107195955 107196504 -59453792 + ORR1D-int LTR MaLR 520 1054 -316 2 1402 352 253 71 24 chrX 107196497 107196582 -59453714 + RSINE1 SINE B4 77 165 0 2 1402 22 0 0 0 chrX 107196599 107196621 -59453675 + AT_rich Low_complexity Low_complexity 1 22 0 2 1402 271 267 0 0 chrX 107196720 107196780 -59453516 + RLTR25A LTR ERVK 1 60 -1043 2 1402 3580 208 116 54 chrX 107196901 107197201 -59453095 + RLTR25B LTR ERVK 1 306 -722 2 1402 850 82 0 0 chrX 107197201 107197323 -59452973 + L1_Mus1 LINE L1 6443 6564 -3 2 1402 3580 208 116 54 chrX 107197323 107197988 -59452308 + RLTR25B LTR ERVK 307 1026 -2 2 1402 24 32 0 0 chrX 107198520 107198551 -59451745 + AT_rich Low_complexity Low_complexity 1 31 0 2 1402 211 371 134 0 chrX 107198653 107198750 -59451546 - PB1D10 SINE Alu -7 110 1 2 1402 748 332 33 5 chrX 107198783 107198998 -59451298 - ID_B1 SINE B4 -2 222 2 2 1402 219 316 13 0 chrX 107199362 107199441 -59450855 + (TG)n Simple_repeat Simple_repeat 1 80 0 2 1402 237 324 65 14 chrX 107199910 107200048 -59450248 - L2 LINE L2 -493 2926 2782 2 1402 227 111 0 0 chrX 107200498 107200534 -59449762 - B3A SINE B2 -160 38 3 2 1402 7077 116 16 3 chrX 107200933 107201965 -59448331 - Lx LINE L1 -22 6632 5587 2 1402 324 70 0 0 chrX 107202010 107202053 -59448243 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1402 220 279 68 23 chrX 107202129 107202217 -59448079 - B2_Mm2 SINE B2 -103 92 1 2 1402 10275 181 40 18 chrX 107202557 107204715 -59445581 - L1_Mur2 LINE L1 -305 5572 3367 2 1402 7056 185 74 11 chrX 107204710 107206208 -59444088 + L1_Mur2 LINE L1 1717 3309 -2577 2 1402 194 0 39 0 chrX 107206208 107206234 -59444062 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1402 7056 185 74 11 chrX 107206234 107206282 -59444014 + L1_Mur1 LINE L1 3310 3360 -2526 2 1402 468 0 0 0 chrX 107206560 107206612 -59443684 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1402 647 259 30 35 chrX 107206748 107206948 -59443348 - B3 SINE B2 -14 202 4 2 1402 1090 101 0 0 chrX 107207110 107207258 -59443038 - B1_Mus1 SINE Alu 0 148 1 2 1402 315 0 0 0 chrX 107207551 107207586 -59442710 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1402 33571 75 7 1 chrX 107209177 107213663 -59436633 - L1Md_F2 LINE L1 -1 6581 2087 2 1402 273 29 0 0 chrX 107213663 107213697 -59436599 + (TTG)n Simple_repeat Simple_repeat 2 35 0 2 1402 33571 70 6 1 chrX 107213697 107215205 -59435091 - L1Md_F2 LINE L1 -3797 2086 550 2 1402 295 298 56 7 chrX 107215276 107215418 -59434878 - RMER15 LTR ERVL -7 568 420 2 1402 1341 343 65 44 chrX 107215678 107216313 -59433983 + MTE-int LTR MaLR 922 1569 -11 2 1402 952 301 72 0 chrX 107216417 107216696 -59433600 + MTEb LTR MaLR 77 375 -4 2 175 4169 102 8 2 chrX 107216810 107217399 -59432897 + L1_Mus1 LINE L1 5974 6566 -1 2 1403 25 108 0 0 chrX 107218431 107218533 -59431763 + AT_rich Low_complexity Low_complexity 1 102 0 2 1403 235 283 3 17 chrX 107218950 107219046 -59431250 + Lx8 LINE L1 5824 5915 -1558 2 1403 1728 83 4 8 chrX 107219260 107219502 -59430794 + L1_Mus1 LINE L1 6327 6567 0 2 1403 931 346 46 46 chrX 107219540 107220015 -59430281 + Lx8 LINE L1 6208 6682 -791 2 1403 297 89 0 0 chrX 107220339 107220384 -59429912 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 1403 240 200 0 20 chrX 107220501 107220552 -59429744 - ORR1D1 LTR MaLR -324 50 1 2 1403 182 171 0 24 chrX 107220683 107220725 -59429571 + (TA)n Simple_repeat Simple_repeat 1 41 0 2 1403 413 66 0 16 chrX 107220749 107220811 -59429485 + (TA)n Simple_repeat Simple_repeat 2 62 0 2 1403 540 321 43 0 chrX 107220854 107221016 -59429280 + MTE2b LTR MaLR 174 342 -37 2 1403 6847 64 1 5 chrX 107221134 107222017 -59428279 - L1Md_F2 LINE L1 -2 6580 5701 2 1403 20634 78 4 0 chrX 107222025 107224803 -59425493 + L1Md_F2 LINE L1 2951 5739 -144 2 1403 183 80 0 0 chrX 107224852 107224877 -59425419 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1403 198 91 0 0 chrX 107224912 107224945 -59425351 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 2 1403 1100 91 12 0 chrX 107224955 107225120 -59425176 - L1_Mus2 LINE L1 -2 6564 6398 2 1403 1005 66 7 7 chrX 107225120 107225257 -59425039 + L1_Mus2 LINE L1 6230 6366 -200 2 1403 577 299 105 9 chrX 107225319 107226117 -59424179 + L1M2 LINE L1 4396 5276 -867 2 1403 27 0 0 0 chrX 107226140 107226167 -59424129 + AT_rich Low_complexity Low_complexity 1 27 0 2 1403 284 289 65 24 chrX 107226286 107226410 -59423886 + L1M2 LINE L1 5463 5591 -712 2 1403 537 64 0 0 chrX 107226834 107226912 -59423384 + (CA)n Simple_repeat Simple_repeat 1 78 0 2 1403 33465 78 3 4 chrX 107227623 107233035 -59417261 + L1Md_F3 LINE L1 238 5585 -298 2 1403 7853 46 2 4 chrX 107233036 107234022 -59416274 + L1Md_F3 LINE L1 5587 6570 -14 2 1403 805 203 22 22 chrX 107234063 107234244 -59416052 - URR1A DNA MER1_type -1 225 45 2 1403 375 301 24 139 chrX 107234266 107234432 -59415864 + RSINE1 SINE B4 15 161 -4 2 1403 2426 194 29 61 chrX 107234648 107235115 -59415181 + L1VL4 LINE L1 739 1201 -5456 2 1403 959 54 0 0 chrX 107235115 107235245 -59415051 + L1_Mus2 LINE L1 6436 6565 -1 2 1403 8904 174 17 4 chrX 107235245 107237526 -59412770 + L1VL4 LINE L1 1202 4335 -1551 2 1403 35255 45 1 4 chrX 107237509 107242695 -59407601 + L1Md_T LINE L1 322 5589 -297 2 1403 8148 46 1 0 chrX 107242695 107243689 -59406607 + L1Md_T LINE L1 5590 6584 -1 2 1403 7478 183 10 64 chrX 107243751 107244571 -59405725 + Lx2A LINE L1 4312 5135 -748 2 1403 1050 110 0 0 chrX 107244571 107244716 -59405580 + B1_Mus2 SINE Alu 1 145 -2 2 1403 8673 151 10 45 chrX 107244716 107246721 -59403575 + Lx2A LINE L1 5136 7007 -1 2 1403 530 264 44 31 chrX 107246997 107247269 -59403027 + ORR1D1 LTR MaLR 19 404 -15 2 1403 340 272 72 33 chrX 107247256 107247408 -59402888 - ORR1D-int LTR MaLR -265 1105 948 2 1403 1888 289 14 70 chrX 107247428 107247837 -59402459 - ORR1D-int LTR MaLR -380 990 610 2 1403 335 23 23 0 chrX 107247837 107247881 -59402415 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 2 1403 1888 289 14 70 chrX 107247881 107248058 -59402238 - ORR1D-int LTR MaLR -761 609 437 2 1403 736 328 75 24 chrX 107248070 107248485 -59401811 - Lx8 LINE L1 -987 6486 6051 2 1403 756 0 0 0 chrX 107249461 107249545 -59400751 + (TTCTC)n Simple_repeat Simple_repeat 4 87 0 2 1403 465 260 103 38 chrX 107249933 107250177 -59400119 - Lx8 LINE L1 -1512 5961 5711 2 1403 254 192 57 9 chrX 107250184 107250289 -59400007 + (TA)n Simple_repeat Simple_repeat 2 111 0 2 1403 672 70 49 14 chrX 107250302 107250446 -59399850 + (TA)n Simple_repeat Simple_repeat 1 149 0 2 1403 511 294 37 66 chrX 107250449 107250722 -59399574 - Lx8 LINE L1 -234 5646 5382 2 1403 198 71 0 0 chrX 107251116 107251144 -59399152 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 2 1403 234 325 94 16 chrX 107251554 107251745 -59398551 + L1MB4 LINE L1 5974 6179 -1 2 1403 24 67 0 0 chrX 107251904 107251949 -59398347 + AT_rich Low_complexity Low_complexity 1 45 0 2 1403 561 304 37 50 chrX 107252027 107252245 -59398051 - B3 SINE B2 0 216 2 2 1403 195 42 0 0 chrX 107252355 107252379 -59397917 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1403 26 0 0 0 chrX 107252452 107252478 -59397818 + AT_rich Low_complexity Low_complexity 1 26 0 2 1403 675 267 101 32 chrX 107252483 107252731 -59397565 - Lx8 LINE L1 -10 7463 7199 2 1403 848 336 35 0 chrX 107252758 107253103 -59397193 - Lx8 LINE L1 -337 7136 6780 2 1403 1943 174 102 29 chrX 107253133 107253554 -59396742 - Lx4B LINE L1 -4 7054 6603 3 1403 7344 137 14 18 chrX 107253552 107253872 -59396424 + Lx3C LINE L1 5556 5799 -1177 3 1403 279 0 0 0 chrX 107253872 107253903 -59396393 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 3 1403 7344 150 31 73 chrX 107253903 107255057 -59395239 + Lx3C LINE L1 5800 6967 -9 3 1403 611 211 18 0 chrX 107255077 107255191 -59395105 - Lx4B LINE L1 -451 6607 6492 3 1403 363 300 131 75 chrX 107255206 107255830 -59394466 - L1M3 LINE L1 -1193 4947 4261 3 1403 694 296 89 23 chrX 107255830 107256179 -59394117 - MTE2a LTR MaLR -3 376 5 3 1403 363 300 131 75 chrX 107256179 107256550 -59393746 - L1M3 LINE L1 -1880 4260 3897 3 1403 296 331 15 2 chrX 107256615 107256807 -59393489 - L1M3 LINE L1 -2251 3889 3668 3 1403 23 54 0 0 chrX 107256846 107256883 -59393413 + AT_rich Low_complexity Low_complexity 1 37 0 3 1403 297 305 33 8 chrX 107257010 107257249 -59393047 - L1M3 LINE L1 -2641 3499 3228 3 1403 711 308 64 78 chrX 107257251 107257610 -59392686 - ORR1E LTR MaLR 0 359 6 3 1403 310 209 72 1 chrX 107257619 107257784 -59392512 - L1M3 LINE L1 -2604 3243 3078 3 1403 399 41 0 0 chrX 107257786 107257835 -59392461 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1403 270 0 0 0 chrX 107257835 107257864 -59392432 + (GA)n Simple_repeat Simple_repeat 1 30 0 3 1403 421 341 0 67 chrX 107257872 107258007 -59392289 - B3 SINE B2 -52 164 39 3 1403 31307 81 21 23 chrX 107258017 107262670 -59387626 - L1Md_F2 LINE L1 -1 6581 1960 3 1403 234 0 0 0 chrX 107262670 107262696 -59387600 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 1403 31307 125 20 31 chrX 107262696 107264208 -59386088 - L1Md_F2 LINE L1 -3924 1959 446 3 1403 241 319 48 45 chrX 107264281 107264550 -59385746 - L1M3 LINE L1 -3068 3075 2806 3 1403 1258 93 15 15 chrX 107264915 107265111 -59385185 + MTB LTR MaLR 205 400 0 3 1403 3016 191 2 5 chrX 107265144 107265711 -59384585 - L1_Mm LINE L1 -67 5816 5252 3 1403 6709 143 19 6 chrX 107265712 107266812 -59383484 + Lx2A1 LINE L1 5894 7008 0 3 1403 1412 327 55 10 chrX 107267025 107267648 -59382648 - Lx8 LINE L1 -35 7438 6788 3 1403 7350 192 25 22 chrX 107267683 107269269 -59381027 - Lx5 LINE L1 -3 7047 5453 3 1403 902 89 0 0 chrX 107269554 107269677 -59380619 + B1_Mm SINE Alu 24 146 -1 3 1403 950 332 112 24 chrX 107269699 107270362 -59379934 + Lx8 LINE L1 5783 6503 -970 3 1403 420 191 0 0 chrX 107272496 107272580 -59377716 + (TA)n Simple_repeat Simple_repeat 2 85 0 3 1403 493 329 108 14 chrX 107273590 107273812 -59376484 + MARNA DNA Mariner 3 245 -341 3 1403 516 16 0 0 chrX 107275414 107275475 -59374821 + (TA)n Simple_repeat Simple_repeat 2 62 0 3 1403 222 116 0 0 chrX 107275475 107275517 -59374779 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1403 7214 56 0 0 chrX 107277063 107277962 -59372334 - L1Md_F2 LINE L1 0 6582 5684 3 1403 17759 5 1 0 chrX 107277965 107280660 -59369636 - L1Md_A LINE L1 0 6582 3886 3 1403 7994 49 4 0 chrX 107280669 107281946 -59368350 - L1Md_F2 LINE L1 -12 6570 5288 3 1403 37686 31 1 0 chrX 107281940 107288569 -59361727 - L1Md_T LINE L1 0 6585 2 3 1403 7335 80 11 2 chrX 107288570 107289590 -59360706 - L1Md_F2 LINE L1 -580 5303 4275 3 1403 246 389 55 39 chrX 107289661 107289843 -59360453 - MIR SINE MIR -33 229 45 3 1403 234 169 0 0 chrX 107290137 107290202 -59360094 + (TA)n Simple_repeat Simple_repeat 1 65 0 3 1403 24 53 0 0 chrX 107290457 107290495 -59359801 + AT_rich Low_complexity Low_complexity 1 38 0 3 1403 620 88 0 0 chrX 107290684 107290764 -59359532 - L1_Mus1 LINE L1 -380 6187 6108 3 1403 876 80 0 0 chrX 107290764 107290924 -59359372 + L1_Mus1 LINE L1 6438 6567 0 3 1403 221 282 139 14 chrX 107291364 107291436 -59358860 - L2a LINE L2 -19 3407 3327 3 1403 266 219 42 17 chrX 107291680 107291776 -59358520 - L1MA4 LINE L1 -393 5907 5814 3 1403 1845 321 69 53 chrX 107291791 107292392 -59357904 - Lx8 LINE L1 -1 7472 6824 3 1403 338 42 21 0 chrX 107292392 107292440 -59357856 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 1403 1845 321 69 53 chrX 107292440 107292776 -59357520 - Lx8 LINE L1 -650 6823 6520 3 1403 647 53 21 0 chrX 107292909 107293004 -59357292 + (TAGA)n Simple_repeat Simple_repeat 4 100 0 3 1403 519 69 0 0 chrX 107293021 107293093 -59357203 + (TA)n Simple_repeat Simple_repeat 1 72 0 3 1403 981 246 93 49 chrX 107293199 107293374 -59356922 + ORR1D1 LTR MaLR 2 183 -201 3 1403 468 0 0 0 chrX 107293374 107293426 -59356870 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 1403 981 246 93 49 chrX 107293426 107293617 -59356679 + ORR1D1 LTR MaLR 184 384 0 3 1403 4389 247 71 55 chrX 107293639 107294900 -59355396 + ORR1D1-int LTR MaLR 90 1370 0 3 1403 1242 254 30 33 chrX 107294901 107295206 -59355090 + ORR1D1 LTR MaLR 12 315 -59 3 1403 3373 210 88 18 chrX 107295209 107296051 -59354245 + L1_Mus1 LINE L1 177 1077 -5539 3 1403 18435 122 26 4 chrX 107296048 107299603 -59350693 + L1_Mus1 LINE L1 2901 6575 -9 3 1403 257 254 30 0 chrX 107299605 107299695 -59350601 + ORR1D1 LTR MaLR 289 384 0 3 1403 231 322 21 11 chrX 107299695 107299789 -59350507 - Lx9 LINE L1 -287 7357 7263 3 1403 659 303 12 49 chrX 107299805 107300059 -59350237 - Lx9 LINE L1 -451 7193 6801 3 1403 186 128 0 0 chrX 107300118 107300157 -59350139 + (T)n Simple_repeat Simple_repeat 1 39 0 3 1403 2606 223 43 60 chrX 107300443 107301602 -59348694 + Lx4B LINE L1 919 2062 -3815 3 1403 6151 200 27 8 chrX 107301598 107303312 -59346984 + Lx4B LINE L1 5199 6965 -11 3 1403 1082 256 16 4 chrX 107303346 107303601 -59346695 + Lx7 LINE L1 6883 7140 -556 3 1403 551 259 14 0 chrX 107303615 107303762 -59346534 + Lx7 LINE L1 7215 7363 -333 3 1403 561 30 0 0 chrX 107303774 107303841 -59346455 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 1403 413 234 24 98 chrX 107303877 107304000 -59346296 - B1_Mur2 SINE Alu -31 118 5 3 1403 587 207 34 60 chrX 107304002 107304151 -59346145 + Lx7 LINE L1 7552 7696 0 3 1403 627 208 23 0 chrX 107304284 107304414 -59345882 + Lx9 LINE L1 7331 7463 -181 3 1403 183 80 0 0 chrX 107304414 107304439 -59345857 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1403 472 176 19 0 chrX 107304452 107304560 -59345736 + Lx9 LINE L1 7534 7643 -1 3 1403 500 319 35 18 chrX 107304572 107304992 -59345304 - L1M2 LINE L1 -1948 4192 3772 3 1403 322 337 44 44 chrX 107304993 107305198 -59345098 - L1M2 LINE L1 -2480 3663 3459 3 1403 334 231 45 52 chrX 107305324 107305479 -59344817 - L1M2 LINE L1 -2900 3243 3090 3 1403 607 177 75 22 chrX 107305764 107305902 -59344394 + L1M4 LINE L1 5532 5671 -629 3 1403 249 348 43 0 chrX 107305904 107305996 -59344300 + B1F1 SINE Alu 3 98 -51 3 1403 486 337 71 31 chrX 107306078 107306503 -59343793 + L1MB8 LINE L1 5710 6151 -33 3 1403 352 325 100 0 chrX 107306767 107306887 -59343409 - ORR1E LTR MaLR -225 134 3 3 1403 231 60 80 0 chrX 107306900 107306950 -59343346 - L1Md_F3 LINE L1 -1 6583 6530 3 1403 5871 53 7 0 chrX 107306948 107307677 -59342619 + L1_Mm LINE L1 5075 5808 -75 3 1403 231 114 0 0 chrX 107307677 107307712 -59342584 + (CAT)n Simple_repeat Simple_repeat 2 36 0 3 1403 4257 137 58 29 chrX 107307720 107308477 -59341819 - Lx3C LINE L1 -8 6968 6190 3 1403 21 36 0 0 chrX 107308486 107308514 -59341782 + AT_rich Low_complexity Low_complexity 1 28 0 3 1403 1475 360 108 38 chrX 107309249 107310342 -59339954 - ORR1E-int LTR MaLR -42 1538 369 3 1403 11535 50 1 2 chrX 107310345 107312498 -59337798 - L1Md_F3 LINE L1 -10 6574 4424 3 1403 435 372 58 27 chrX 107312498 107312874 -59337422 - ORR1E-int LTR MaLR -1192 388 1 3 1403 463 347 54 48 chrX 107312880 107313234 -59337062 - ORR1E LTR MaLR 0 359 4 3 1403 278 333 31 70 chrX 107313242 107313371 -59336925 - B3A SINE B2 -42 156 33 3 1403 324 0 0 0 chrX 107313371 107313407 -59336889 + (TC)n Simple_repeat Simple_repeat 1 36 0 3 1403 621 106 0 0 chrX 107313407 107313510 -59336786 + (CA)n Simple_repeat Simple_repeat 1 104 0 3 1403 28 79 0 0 chrX 107313645 107313708 -59336588 + AT_rich Low_complexity Low_complexity 1 63 0 3 1403 307 317 64 16 chrX 107313823 107313948 -59336348 - RSINE1 SINE B4 -14 151 21 3 1403 23 0 0 0 chrX 107314084 107314107 -59336189 + AT_rich Low_complexity Low_complexity 1 23 0 3 1403 356 202 43 17 chrX 107314107 107314223 -59336073 - Lx9 LINE L1 0 7644 7526 3 1403 2443 231 49 27 chrX 107314239 107314910 -59335386 - Lx9 LINE L1 -172 7472 6787 3 1403 4256 223 31 7 chrX 107315008 107315921 -59334375 - Lx4B LINE L1 -76 6982 6071 3 1403 440 204 81 152 chrX 107316149 107316346 -59333950 - B3 SINE B2 -6 210 6 3 1403 26326 60 44 2 chrX 107318336 107319660 -59330636 - L1Md_F2 LINE L1 -15 6567 5244 3 1403 351 0 0 0 chrX 107319660 107319699 -59330597 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 1403 26326 83 121 30 chrX 107319699 107324281 -59326015 - L1Md_F2 LINE L1 -640 5243 144 3 1403 1191 83 28 6 chrX 107324300 107324327 -59325969 - B2_Mm1t SINE B2 0 193 162 3 1403 387 0 0 0 chrX 107324327 107324370 -59325926 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 3 1403 1191 83 28 6 chrX 107324370 107324523 -59325773 - B2_Mm1t SINE B2 -32 161 10 3 1403 180 0 0 0 chrX 107324525 107324545 -59325751 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1403 198 0 0 0 chrX 107324554 107324576 -59325720 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 1403 830 331 63 52 chrX 107324685 107324827 -59325469 + LTR69 LTR ERVL 96 242 -346 3 1403 2659 148 30 21 chrX 107324827 107325302 -59324994 + Lx2 LINE L1 6517 6995 -2 3 1403 830 331 63 52 chrX 107325302 107325637 -59324659 + LTR69 LTR ERVL 243 578 -10 3 1403 277 65 0 42 chrX 107325627 107325666 -59324630 + B1_Mm SINE Alu 100 138 -9 3 1403 256 48 23 23 chrX 107325666 107325709 -59324587 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1403 397 346 104 31 chrX 107325879 107326515 -59323781 - L1M5 LINE L1 -3257 2889 2205 3 1403 312 355 65 19 chrX 107326554 107326709 -59323587 + HAL1-3A_ME LINE L1 2287 2448 -410 3 1403 1152 159 289 10 chrX 107326797 107327101 -59323195 + MTB_Mm LTR MaLR 19 407 0 3 1403 341 326 97 31 chrX 107327176 107327404 -59322892 + L1MD LINE L1 4417 4659 -1487 3 1403 22258 159 38 37 chrX 107327561 107328867 -59321429 + L1Md_F LINE L1 238 1532 -4354 3 1403 1273 100 49 20 chrX 107328867 107329071 -59321225 + L1Md_F2 LINE L1 6373 6582 0 3 1403 564 250 118 7 chrX 107329071 107329224 -59321072 + B3 SINE B2 31 200 -16 3 1403 9203 92 8 1 chrX 107331998 107333306 -59316990 + L1_Mm LINE L1 4252 5569 -314 3 1403 3254 196 60 49 chrX 107333306 107333323 -59316973 - RLTR40 LTR ERVK -10 807 791 3 1403 6639 75 60 17 chrX 107333323 107334266 -59316030 + L1Md_F2 LINE L1 5587 6570 -12 3 1403 3254 196 60 49 chrX 107334266 107335046 -59315250 - RLTR40 LTR ERVK -27 790 1 3 1403 303 324 120 5 chrX 107335074 107335291 -59315005 + L1MD LINE L1 4775 5016 -1130 3 1403 1069 118 72 11 chrX 107335379 107335559 -59314737 - B2_Mm2 SINE B2 -3 192 2 3 1403 301 328 26 118 chrX 107335644 107335796 -59314500 + RSINE1 SINE B4 28 165 0 3 1403 397 303 48 29 chrX 107335848 107336311 -59313985 + L1MD LINE L1 5227 5698 -661 3 1403 23 33 0 0 chrX 107336450 107336480 -59313816 + AT_rich Low_complexity Low_complexity 1 30 0 3 1403 7414 106 16 7 chrX 107336484 107338064 -59312232 - L1_Mus3 LINE L1 -3 6635 5048 3 1403 532 191 85 25 chrX 107338929 107339047 -59311249 - RLTR25A LTR ERVK -14 1014 890 3 1403 2719 219 31 58 chrX 107339039 107339798 -59310498 - RLTR25A LTR ERVK -251 777 1 3 1403 473 302 93 29 chrX 107339800 107340074 -59310222 - B4 SINE B4 -18 274 12 3 1403 24 0 0 0 chrX 107340144 107340168 -59310128 + AT_rich Low_complexity Low_complexity 1 24 0 3 1403 28 71 0 0 chrX 107340220 107340276 -59310020 + AT_rich Low_complexity Low_complexity 1 56 0 3 1403 320 0 0 24 chrX 107340704 107340745 -59309551 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 3 1403 535 224 66 15 chrX 107340906 107341042 -59309254 - L1_Mur3 LINE L1 -7235 477 335 3 1403 11009 133 6 8 chrX 107341178 107342502 -59307794 - L1_Mus4 LINE L1 -569 6067 4740 4 1403 369 0 0 0 chrX 107342502 107342543 -59307753 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1403 11009 165 8 13 chrX 107342543 107342564 -59307732 - L1_Mus4 LINE L1 -1144 4739 4737 4 1403 4092 65 28 2 chrX 107342564 107343104 -59307192 - L1Md_F2 LINE L1 -13 6569 6016 4 1403 11009 165 8 13 chrX 107343104 107343960 -59306336 - L1_Mus4 LINE L1 -1147 4736 3876 4 1403 687 129 0 0 chrX 107343946 107344047 -59306249 + L1_Mus4 LINE L1 6094 6194 -442 4 1403 1890 119 19 60 chrX 107344047 107344430 -59305866 + RLTR10A LTR ERVK 1 380 -10 4 1403 619 98 22 0 chrX 107344439 107344531 -59305765 + MMERVK10C-int LTR ERVK 1 94 -7487 4 1403 504 307 7 0 chrX 107344526 107344679 -59305617 + MMERVK10C-int LTR ERVK 271 424 -7157 4 1403 626 209 57 0 chrX 107344676 107344834 -59305462 + MMERVK10C-int LTR ERVK 660 826 -6755 4 1403 775 17 68 0 chrX 107344847 107344965 -59305331 + (GGAAA)n Simple_repeat Simple_repeat 3 128 0 4 1403 720 179 6 46 chrX 107344965 107345198 -59305098 + RLTR10-int LTR ERVK 96 503 -6039 4 1403 1688 92 104 0 chrX 107345198 107345448 -59304848 + RLTR10-int LTR ERVK 5007 5282 -1260 4 1403 4864 99 13 10 chrX 107345456 107346187 -59304109 + RLTR10-int LTR ERVK 1316 1986 -1 4 1403 1957 104 39 17 chrX 107346187 107346557 -59303739 + RLTR10A LTR ERVK 1 386 -4 4 1403 2733 126 23 2 chrX 107346558 107346997 -59303299 + L1_Mus4 LINE L1 6189 6636 0 4 1403 428 62 16 0 chrX 107347022 107347086 -59303210 + (TATG)n Simple_repeat Simple_repeat 4 68 0 4 1403 279 0 0 0 chrX 107347104 107347135 -59303161 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1403 466 360 7 26 chrX 107347135 107347289 -59303007 - RSINE1 SINE B4 0 165 15 4 175 1171 299 92 46 chrX 107347333 107348523 -59301773 - L1M3 LINE L1 -855 5288 4047 4 1404 849 285 61 44 chrX 107348503 107349027 -59301269 - L1_Mur3 LINE L1 -2896 2984 2452 4 1404 1788 233 97 49 chrX 107349108 107349235 -59301061 - Lx9 LINE L1 -2 7642 7516 4 1404 384 22 0 0 chrX 107349235 107349280 -59301016 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1404 1788 233 97 49 chrX 107349280 107349476 -59300820 - Lx9 LINE L1 -129 7515 7285 4 1404 3162 160 18 84 chrX 107349476 107350213 -59300083 - RMER6C LTR ERVK -2 688 1 4 1404 1788 233 97 49 chrX 107350213 107350456 -59299840 - Lx9 LINE L1 -360 7284 7048 4 1404 724 341 5 9 chrX 107350460 107350673 -59299623 - B3 SINE B2 0 216 5 4 1404 476 270 28 44 chrX 107350685 107350867 -59299429 - L1_Mur3 LINE L1 -3512 2368 2190 4 1404 1324 233 13 0 chrX 107350888 107351189 -59299107 - Lx9 LINE L1 -536 7108 6804 4 1404 301 299 56 17 chrX 107351191 107351371 -59298925 + Lx9 LINE L1 6060 6246 -1398 4 1404 252 86 0 0 chrX 107351410 107351445 -59298851 + (CATATA)n Simple_repeat Simple_repeat 5 39 0 4 1404 273 29 0 0 chrX 107351445 107351478 -59298818 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1404 663 13 0 0 chrX 107351478 107351553 -59298743 + (GA)n Simple_repeat Simple_repeat 1 76 0 4 1404 1737 272 50 5 chrX 107351559 107351983 -59298313 + Lx9 LINE L1 6353 6795 -849 4 1404 742 314 39 15 chrX 107351992 107352481 -59297815 - L1_Mur3 LINE L1 -3967 1913 1408 4 1404 22 35 0 0 chrX 107352679 107352708 -59297588 + AT_rich Low_complexity Low_complexity 1 29 0 4 1404 25 0 0 0 chrX 107352774 107352799 -59297497 + AT_rich Low_complexity Low_complexity 1 25 0 4 1404 6510 149 23 30 chrX 107352905 107354618 -59295678 + Lx LINE L1 4970 6650 -4 4 1404 471 18 0 0 chrX 107354869 107354925 -59295371 + (CAAAA)n Simple_repeat Simple_repeat 2 57 0 4 1404 195 42 0 0 chrX 107355183 107355207 -59295089 + (TTA)n Simple_repeat Simple_repeat 3 26 0 4 1404 29 47 0 0 chrX 107355961 107356004 -59294292 + AT_rich Low_complexity Low_complexity 1 43 0 4 1404 358 233 0 40 chrX 107356508 107356584 -59293712 - ID4_ SINE ID -9 74 2 4 1404 317 312 211 15 chrX 107356909 107357253 -59293043 - L1M2 LINE L1 -1310 4833 4411 4 1404 787 184 55 6 chrX 107357253 107357417 -59292879 - Lx2B LINE L1 -2 6998 6827 4 1404 276 285 190 21 chrX 107357417 107357667 -59292629 - L1M2 LINE L1 -1730 4410 4103 4 1404 471 35 0 0 chrX 107357742 107357799 -59292497 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 1404 201 39 0 0 chrX 107357799 107357824 -59292472 + (GA)n Simple_repeat Simple_repeat 1 26 0 4 1404 447 336 71 21 chrX 107357854 107358094 -59292202 - L1M2 LINE L1 -1790 4353 4102 4 1404 189 0 0 0 chrX 107358097 107358118 -59292178 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 1404 13765 97 19 15 chrX 107358127 107360599 -59289697 - L1VL4 LINE L1 -506 3053 577 4 1404 7097 111 89 111 chrX 107360595 107361211 -59289085 - L1Md_F LINE L1 -3139 2744 2066 4 1404 324 374 75 40 chrX 107361211 107361384 -59288912 + B3 SINE B2 24 202 -14 4 1404 7097 111 89 111 chrX 107361384 107362256 -59288040 - L1Md_F LINE L1 -3139 2065 1103 4 1404 3480 40 2 0 chrX 107362256 107362678 -59287618 - L1Md_T LINE L1 0 6582 6160 4 1404 4045 156 114 18 chrX 107362678 107363504 -59286792 - L1Md_F LINE L1 -5521 1117 233 4 1404 1335 158 184 30 chrX 107363499 107363814 -59286482 - L1Md_F LINE L1 -6077 561 218 4 1404 431 330 94 55 chrX 107364569 107364932 -59285364 - MTEa LTR MaLR 0 379 3 4 1404 218 200 0 0 chrX 107365520 107365560 -59284736 + (CATATA)n Simple_repeat Simple_repeat 3 42 0 4 1404 1250 271 167 20 chrX 107365564 107366159 -59284137 - Lx6 LINE L1 -716 6744 6062 4 1404 255 31 0 0 chrX 107366270 107366302 -59283994 + (A)n Simple_repeat Simple_repeat 1 32 0 4 1404 366 23 0 0 chrX 107366565 107366608 -59283688 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1404 655 265 99 0 chrX 107366623 107366785 -59283511 + B3 SINE B2 1 178 -38 4 1404 309 261 73 15 chrX 107366810 107366946 -59283350 + L1M4 LINE L1 3782 3925 -2221 4 1404 915 291 53 12 chrX 107366944 107367280 -59283016 - Lx6 LINE L1 -606 5274 4927 4 1404 223 224 0 33 chrX 107367312 107367372 -59282924 + GA-rich Low_complexity Low_complexity 2 59 0 4 1404 833 300 111 15 chrX 107367373 107367897 -59282399 + L1M2 LINE L1 4470 5043 -1100 4 1404 250 278 112 25 chrX 107367975 107368171 -59282125 + L1M2 LINE L1 3846 4058 -2085 4 1404 297 287 18 44 chrX 107368331 107368444 -59281852 + PB1D9 SINE Alu 10 119 -1 4 1404 23 68 0 0 chrX 107368472 107368516 -59281780 + AT_rich Low_complexity Low_complexity 1 44 0 4 1404 263 271 50 61 chrX 107368651 107368832 -59281464 - L1M2 LINE L1 -979 5164 4986 4 1404 823 270 22 53 chrX 107369002 107369342 -59280954 + MLT1A1 LTR MaLR 6 325 -40 4 1404 24 32 0 0 chrX 107369432 107369463 -59280833 + AT_rich Low_complexity Low_complexity 1 31 0 4 1404 35 71 0 0 chrX 107369658 107369728 -59280568 + AT_rich Low_complexity Low_complexity 1 70 0 4 1404 271 288 90 0 chrX 107370159 107370270 -59280026 - L1MB2 LINE L1 -183 5988 5868 4 1404 672 281 9 18 chrX 107370270 107370498 -59279798 + L1M2 LINE L1 5370 5595 -573 4 1404 667 273 60 10 chrX 107373880 107374080 -59276216 + B3 SINE B2 1 210 -6 4 1404 25 31 0 0 chrX 107374080 107374112 -59276184 + AT_rich Low_complexity Low_complexity 1 32 0 4 1404 296 302 45 23 chrX 107374907 107374995 -59275301 + 7SK RNA RNA 1 90 -241 4 1404 2719 186 42 2 chrX 107375341 107375846 -59274450 - RLTR11A2 LTR ERVK 0 527 3 4 1404 2586 47 3 0 chrX 107375948 107376269 -59274027 + L1_Mus1 LINE L1 6245 6566 -1 4 1404 3186 182 80 7 chrX 107376748 107377333 -59272963 - Lx5 LINE L1 -3 7047 6420 4 1404 2784 192 59 15 chrX 107377322 107377918 -59272378 + Lx5 LINE L1 5812 6433 -617 4 1404 446 311 8 8 chrX 107377977 107378110 -59272186 + RSINE1 SINE B4 4 136 -29 4 1404 726 245 19 38 chrX 107378275 107378432 -59271864 - RSINE1 SINE B4 0 165 12 4 1404 723 186 0 0 chrX 107378458 107378576 -59271720 - RMER6A LTR ERVK -11 745 628 4 1404 1580 232 57 26 chrX 107378628 107379013 -59271283 - MTD LTR MaLR -13 406 10 4 1404 3741 70 38 0 chrX 107379061 107379120 -59271176 - L1_Mus1 LINE L1 0 6567 6509 4 1404 189 0 0 0 chrX 107379120 107379141 -59271155 + (CCCA)n Simple_repeat Simple_repeat 2 22 0 4 1404 3741 70 38 0 chrX 107379141 107379582 -59270714 - L1_Mus1 LINE L1 -59 6508 6049 4 1404 195 100 0 0 chrX 107380320 107380350 -59269946 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 1404 34 72 0 0 chrX 107380493 107380562 -59269734 + AT_rich Low_complexity Low_complexity 1 69 0 4 1404 687 330 82 15 chrX 107380834 107381373 -59268923 - L1MB1 LINE L1 -14 6154 5580 4 1404 4438 137 22 28 chrX 107381458 107382215 -59268081 + Lx2 LINE L1 6240 6992 -5 4 1404 831 299 57 62 chrX 107382282 107382752 -59267544 - Lx8 LINE L1 -32 7441 6974 4 1404 525 285 29 11 chrX 107382745 107382919 -59267377 - Lx8 LINE L1 -1039 6434 6258 4 1404 443 262 97 16 chrX 107384092 107384216 -59266080 - B1_Mur2 SINE Alu -8 141 8 4 1404 24 53 0 0 chrX 107384315 107384353 -59265943 + AT_rich Low_complexity Low_complexity 1 38 0 4 1404 572 266 174 6 chrX 107384681 107384859 -59265437 + B3 SINE B2 1 208 -8 4 1404 252 327 28 83 chrX 107385282 107385462 -59264834 + L1MEe LINE L1 295 464 -5778 4 1404 195 100 0 0 chrX 107385625 107385655 -59264641 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 1404 384 333 164 16 chrX 107386054 107386298 -59263998 - B4A SINE B4 -8 284 5 4 1404 21 0 0 0 chrX 107386633 107386654 -59263642 + AT_rich Low_complexity Low_complexity 1 21 0 4 1404 354 294 108 78 chrX 107386678 107387050 -59263246 + L1MEe LINE L1 2089 2468 -3698 4 1404 315 113 0 0 chrX 107387050 107387103 -59263193 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1404 354 338 65 68 chrX 107387103 107387163 -59263133 + L1MEe LINE L1 2452 2511 -3635 4 1404 516 253 34 11 chrX 107387192 107387368 -59262928 + Lx8 LINE L1 5748 5927 -1546 4 1404 581 350 15 0 chrX 107387466 107387666 -59262630 + Lx8 LINE L1 7051 7253 -220 4 1404 7313 173 15 8 chrX 107387663 107387716 -59262580 - L1_Mm LINE L1 -390 5493 5442 4 1404 1559 126 85 7 chrX 107387716 107388015 -59262281 - L1_Mus4 LINE L1 0 6636 6330 4 1404 7415 173 13 26 chrX 107388015 107389406 -59260890 - L1_Mm LINE L1 -442 5441 4067 4 1404 1624 142 9 76 chrX 107389405 107389731 -59260565 + L1ME1 LINE L1 5510 5863 -316 4 1404 3925 66 2 2 chrX 107389829 107390333 -59259963 - L1_Mus2 LINE L1 0 6566 6063 4 1404 450 355 101 37 chrX 107390335 107390742 -59259554 + L1M5 LINE L1 2676 3108 -3038 4 1404 245 287 144 24 chrX 107390937 107391062 -59259234 + MER5B DNA MER1_type 7 146 -32 4 1404 2792 138 7 13 chrX 107391680 107392137 -59258159 + Lx2B LINE L1 6530 6983 -17 4 1404 3057 117 5 1 chrX 107392144 107392687 -59257609 + L1Md_F2 LINE L1 631 1172 -5552 4 1404 8741 79 2 6 chrX 107392668 107393857 -59256439 + L1Md_F2 LINE L1 4401 5584 -299 4 1404 7680 67 8 0 chrX 107393859 107394844 -59255452 + L1Md_F2 LINE L1 5587 6579 -3 4 1404 279 0 0 0 chrX 107394929 107394960 -59255336 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1404 1065 183 36 0 chrX 107395074 107395293 -59255003 + Lx2B LINE L1 5942 6168 -832 4 1404 252 0 0 0 chrX 107395293 107395321 -59254975 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1404 3451 118 64 65 chrX 107395334 107396069 -59254227 - RMER17A LTR ERVK -15 736 3 4 1404 3960 212 31 6 chrX 107396069 107396898 -59253398 + Lx2B LINE L1 6151 7000 0 4 1404 25 31 0 0 chrX 107397416 107397448 -59252848 + AT_rich Low_complexity Low_complexity 1 32 0 4 1404 28 61 0 0 chrX 107397690 107397739 -59252557 + AT_rich Low_complexity Low_complexity 1 49 0 4 1404 252 0 0 0 chrX 107397825 107397853 -59252443 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 1404 471 35 0 0 chrX 107399099 107399156 -59251140 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1404 6490 167 31 7 chrX 107399671 107400840 -59249456 - Lx4A LINE L1 0 7058 5862 5 1404 1412 117 8 59 chrX 107400838 107401093 -59249203 - L1Md_F2 LINE L1 0 6582 6341 5 1404 24932 149 27 16 chrX 107401098 107402355 -59247941 - L1_Mur2 LINE L1 -8 5869 4625 5 1404 218 32 0 31 chrX 107402355 107402387 -59247909 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1404 24932 149 27 16 chrX 107402387 107404055 -59246241 - L1_Mur2 LINE L1 -1253 4624 2911 5 1404 1135 74 0 7 chrX 107404055 107404204 -59246092 - B1_Mus1 SINE Alu 0 148 1 5 1404 24932 149 27 16 chrX 107404204 107404557 -59245739 - L1_Mur2 LINE L1 -2967 2910 2563 5 1404 729 0 0 0 chrX 107404557 107404638 -59245658 + (TTTTG)n Simple_repeat Simple_repeat 2 82 0 5 1404 24932 149 27 16 chrX 107404638 107405138 -59245158 - L1_Mur2 LINE L1 -3315 2562 2050 5 1404 414 0 0 0 chrX 107405138 107405184 -59245112 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1404 24932 151 25 12 chrX 107405184 107406317 -59243979 - L1_Mur2 LINE L1 -3828 2049 896 5 1404 363 322 21 42 chrX 107406717 107406908 -59243388 + L1M2 LINE L1 5212 5398 -745 5 1404 1791 135 74 0 chrX 107406918 107407214 -59243082 + ORR1A3 LTR MaLR 1 318 -8 5 1404 340 314 18 0 chrX 107407215 107407325 -59242971 + L1_Mm LINE L1 5381 5480 -403 5 1404 555 76 41 11 chrX 107407311 107407420 -59242876 - L1_Mur2 LINE L1 -2531 3316 3194 5 1404 850 236 5 19 chrX 107407470 107407677 -59242619 + L1_Rod LINE L1 5508 5711 -136 5 1404 2756 294 89 26 chrX 107407674 107408862 -59241434 - Lx9 LINE L1 -206 7438 6176 5 1404 299 320 10 0 chrX 107408890 107408990 -59241306 - L1M4 LINE L1 -6045 497 397 5 1404 228 51 102 0 chrX 107409004 107409063 -59241233 + (TA)n Simple_repeat Simple_repeat 1 65 0 5 1404 204 40 0 0 chrX 107409085 107409110 -59241186 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1404 21 0 0 0 chrX 107409491 107409512 -59240784 + AT_rich Low_complexity Low_complexity 1 21 0 5 1404 1449 273 51 57 chrX 107409774 107409823 -59240473 + RMER1B Other Other 1 45 -1021 5 1404 2848 86 8 12 chrX 107409823 107410225 -59240071 + MTB LTR MaLR 1 400 0 5 1404 2427 248 33 40 chrX 107410225 107411169 -59239127 + RMER1B Other Other 46 1052 -14 5 1404 1326 78 0 0 chrX 107411183 107411363 -59238933 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 1404 2208 161 83 12 chrX 107411985 107412350 -59237946 + L1_Mur2 LINE L1 276 651 -6061 5 1404 303 71 0 0 chrX 107412350 107412392 -59237904 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1404 2208 161 83 12 chrX 107412392 107412448 -59237848 + L1_Mur2 LINE L1 652 726 -5986 5 1404 4118 221 65 16 chrX 107412448 107413481 -59236815 - ORR1B2-int LTR MaLR -424 1085 2 5 1404 1167 188 19 3 chrX 107413482 107413706 -59236590 - ORR1B2 LTR MaLR 0 374 146 5 1404 986 269 128 40 chrX 107413706 107414377 -59235919 - L1M4 LINE L1 -2124 4022 3262 5 1404 868 85 147 0 chrX 107414380 107414509 -59235787 - B1_Mus1 SINE Alu 0 148 1 5 1404 1697 161 152 3 chrX 107414572 107414915 -59235381 + ORR1B1 LTR MaLR 1 394 0 5 1404 1488 197 44 41 chrX 107414921 107415358 -59234938 + RMER17C LTR ERVK 16 428 -530 5 1404 425 214 72 89 chrX 107415360 107415690 -59234606 - L1M4 LINE L1 -2904 3239 2922 5 1404 228 188 83 0 chrX 107415675 107415723 -59234573 - L1M4 LINE L1 -2882 2965 2914 5 1404 541 296 8 8 chrX 107415732 107415858 -59234438 + MTD LTR MaLR 70 195 -224 5 1404 2223 224 24 28 chrX 107415860 107416360 -59233936 + RMER1C Other Other 729 1226 -116 5 1404 218 280 0 0 chrX 107416366 107416416 -59233880 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1404 778 274 0 38 chrX 107416509 107416718 -59233578 + B3 SINE B2 10 210 -6 5 1404 21 0 0 0 chrX 107416924 107416945 -59233351 + AT_rich Low_complexity Low_complexity 1 21 0 5 1404 388 307 40 57 chrX 107417064 107417641 -59232655 + L1M2 LINE L1 2292 2858 -3991 5 1404 409 307 88 0 chrX 107417840 107417954 -59232342 - B3A SINE B2 -73 125 2 5 1404 22 0 0 0 chrX 107418006 107418028 -59232268 + AT_rich Low_complexity Low_complexity 1 22 0 5 1404 435 311 89 14 chrX 107418029 107418378 -59231918 + L1M2 LINE L1 3148 3522 -3323 5 1404 1219 272 27 62 chrX 107418746 107419118 -59231178 + MTEb LTR MaLR 8 366 -13 5 1404 1476 103 0 23 chrX 107419194 107419412 -59230884 - L1Md_T LINE L1 -331 6251 6039 5 1404 180 0 0 0 chrX 107419412 107419432 -59230864 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1404 2008 0 0 9 chrX 107419440 107419673 -59230623 + L1Md_T LINE L1 6352 6582 0 5 1404 771 264 9 46 chrX 107419910 107420128 -59230168 - MTEb LTR MaLR -3 376 167 5 1404 255 21 41 41 chrX 107420133 107420182 -59230114 + (TTTG)n Simple_repeat Simple_repeat 4 52 0 5 1404 243 263 0 0 chrX 107420354 107420411 -59229885 - Lx2B LINE L1 -28 6972 6916 5 1404 430 266 26 53 chrX 107420412 107420563 -59229733 - MTE-int LTR MaLR 0 1580 1434 5 1404 436 234 80 18 chrX 107420568 107420681 -59229615 - MTEb LTR MaLR -251 128 9 5 1404 963 292 97 48 chrX 107421126 107421878 -59228418 + L1M2 LINE L1 2244 3032 -3111 5 1404 537 16 0 0 chrX 107421988 107422050 -59228246 + (CA)n Simple_repeat Simple_repeat 2 63 0 5 1404 2270 279 79 108 chrX 107422052 107422563 -59227733 + Lx9 LINE L1 6342 6804 -840 5 1404 5021 43 38 2 chrX 107422563 107423193 -59227103 - L1Md_F2 LINE L1 -15 6567 5915 5 1404 2270 279 79 108 chrX 107423193 107423728 -59226568 + Lx9 LINE L1 6805 7358 -286 5 1404 415 259 35 35 chrX 107423794 107423910 -59226386 + MTE2b LTR MaLR 262 377 -2 5 1404 540 360 53 37 chrX 107423910 107424260 -59226036 - RMER15 LTR ERVL -30 545 190 5 1404 901 115 27 169 chrX 107424342 107424561 -59225735 - RLTR44C LTR ERVK 0 502 315 5 1404 2537 103 28 56 chrX 107424598 107425029 -59225267 - RLTR44C LTR ERVK -83 419 1 5 1404 2082 293 53 46 chrX 107425062 107425784 -59224512 - RMER15-int LTR ERVL -5 4994 4268 5 1404 1503 301 40 38 chrX 107425809 107426334 -59223962 - RMER15-int LTR ERVL -1479 3520 2995 5 1404 979 298 142 13 chrX 107426337 107426653 -59223643 + ORR1E LTR MaLR 1 357 -2 5 1404 921 316 82 74 chrX 107426692 107427008 -59223288 - RMER15-int LTR ERVL -2040 2959 2654 5 1404 1674 203 32 51 chrX 107427008 107427382 -59222914 + ORR1B2 LTR MaLR 1 367 0 5 1404 921 316 82 74 chrX 107427382 107427486 -59222810 - RMER15-int LTR ERVL -2346 2653 2555 5 1404 300 27 0 0 chrX 107427486 107427523 -59222773 + (TTA)n Simple_repeat Simple_repeat 3 39 0 5 1404 921 316 82 74 chrX 107427523 107427552 -59222744 - RMER15-int LTR ERVL -2445 2554 2510 5 1404 420 111 0 0 chrX 107427552 107427615 -59222681 + (TA)n Simple_repeat Simple_repeat 2 64 0 5 1404 921 316 82 74 chrX 107427615 107427761 -59222535 - RMER15-int LTR ERVL -2490 2509 2365 5 1404 1108 97 91 0 chrX 107427761 107427936 -59222360 + B2_Mm2 SINE B2 3 193 -2 5 1404 921 316 82 74 chrX 107427936 107427999 -59222297 - RMER15-int LTR ERVL -2635 2364 2293 5 1404 693 118 0 0 chrX 107428056 107428166 -59222130 + (GAAA)n Simple_repeat Simple_repeat 4 113 0 5 1404 1676 202 60 80 chrX 107428540 107429417 -59220879 + RMER6C LTR ERVK 1 690 0 5 1404 5100 99 40 10 chrX 107429600 107430373 -59219923 - Lx LINE L1 -1 6653 5858 5 1404 1206 192 25 90 chrX 107430450 107430816 -59219480 - Lx7 LINE L1 0 7696 7355 5 1404 26 0 0 0 chrX 107430837 107430863 -59219433 + AT_rich Low_complexity Low_complexity 1 26 0 5 1404 3543 238 26 1 chrX 107430863 107431658 -59218638 - Lx7 LINE L1 -326 7370 6556 5 1404 447 384 8 41 chrX 107431797 107431931 -59218365 + MTE-int LTR MaLR 847 975 -605 5 1404 2924 84 2 8 chrX 107431931 107432327 -59217969 - MTA_Mm LTR MaLR -1 395 2 5 1404 447 384 8 41 chrX 107432327 107432434 -59217862 + MTE-int LTR MaLR 976 1080 -500 5 1404 1780 148 19 62 chrX 107432574 107432898 -59217398 + ORR1A3 LTR MaLR 2 311 -15 5 1404 873 121 8 0 chrX 107433013 107433137 -59217159 + ORR1A4 LTR MaLR 160 284 -45 5 1404 4313 81 0 12 chrX 107433147 107433724 -59216572 + L1_Mus1 LINE L1 5998 6567 0 5 1404 26 0 0 0 chrX 107433762 107433788 -59216508 + AT_rich Low_complexity Low_complexity 1 26 0 5 1404 352 158 0 0 chrX 107433788 107433845 -59216451 + ORR1A4 LTR MaLR 270 326 0 5 1404 327 185 161 0 chrX 107433863 107433944 -59216352 + L1_Mur1 LINE L1 600 693 -6289 5 1404 7285 74 4 30 chrX 107433981 107435022 -59215274 + L1Md_F2 LINE L1 4558 5571 -312 5 1404 7384 80 5 3 chrX 107435022 107436004 -59214292 + L1Md_F2 LINE L1 5587 6570 -12 5 1404 226 233 23 0 chrX 107436110 107436153 -59214143 - tRNA-Gly-GGA tRNA tRNA -31 44 1 5 1404 347 335 38 71 chrX 107436202 107436587 -59213709 - Lx9 LINE L1 0 7473 7088 5 1404 240 266 62 31 chrX 107436645 107436742 -59213554 + MTEb LTR MaLR 278 377 -2 5 1404 318 264 154 32 chrX 107436779 107437026 -59213270 + L1M2 LINE L1 3607 3883 -2260 5 1404 379 330 51 17 chrX 107437038 107437390 -59212906 + L1M2 LINE L1 4103 4466 -1677 5 1404 283 289 0 0 chrX 107437434 107437510 -59212786 - Lx7 LINE L1 -596 7100 7025 5 1404 527 324 49 27 chrX 107437557 107437782 -59212514 + Lx8 LINE L1 7172 7401 -72 5 1404 355 358 111 22 chrX 107437830 107438190 -59212106 + L1M2 LINE L1 4435 4826 -1317 5 1404 258 231 31 0 chrX 107438193 107438258 -59212038 + L1MA8 LINE L1 5863 5929 -362 5 1404 189 0 0 0 chrX 107438413 107438434 -59211862 + (TA)n Simple_repeat Simple_repeat 1 21 0 5 1404 220 122 24 0 chrX 107438472 107438513 -59211783 + (GAAA)n Simple_repeat Simple_repeat 2 43 0 5 1404 6426 70 0 9 chrX 107438572 107439423 -59210873 + L1Md_F2 LINE L1 5740 6582 0 5 1404 432 290 61 0 chrX 107439500 107439631 -59210665 + ID_B1 SINE B4 85 223 -1 5 1404 1402 222 11 7 chrX 107439735 107440012 -59210284 + Lx9 LINE L1 6424 6701 -943 5 1404 2491 151 31 37 chrX 107440012 107440493 -59209803 + Lx4A LINE L1 6580 7057 -1 5 1404 970 259 0 17 chrX 107440508 107440740 -59209556 + Lx9 LINE L1 6985 7212 -432 5 1404 1396 179 43 152 chrX 107440742 107441164 -59209132 - ORR1C1 LTR MaLR -2 376 1 5 1404 790 243 47 5 chrX 107441164 107441375 -59208921 + Lx9 LINE L1 7216 7435 -209 5 1404 337 240 10 10 chrX 107441402 107441499 -59208797 + Lx9 LINE L1 7537 7633 -11 5 1404 382 222 54 32 chrX 107442286 107442379 -59207917 + MTE2a LTR MaLR 272 366 -13 5 1404 428 221 0 40 chrX 107442502 107442601 -59207695 + B3 SINE B2 122 216 0 5 1404 230 212 71 59 chrX 107442632 107442717 -59207579 + L1M3 LINE L1 5834 5919 -252 5 1404 261 57 0 0 chrX 107442833 107442868 -59207428 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1404 33280 86 4 4 chrX 107445280 107450684 -59199612 - L1Md_F2 LINE L1 -13 6569 1166 5 1404 1156 186 56 41 chrX 107450696 107450940 -59199356 + RLTR46 LTR ERVK 43 291 -29 5 1404 216 0 0 0 chrX 107450940 107450964 -59199332 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 1404 1156 186 56 41 chrX 107450964 107450988 -59199308 + RLTR46 LTR ERVK 292 315 -5 5 1404 358 261 49 69 chrX 107450997 107451141 -59199155 + IAPEY3-int LTR ERVK 3 143 -7537 5 1404 540 229 98 10 chrX 107451192 107451386 -59198910 + IAPEY3-int LTR ERVK 535 745 -6935 5 1404 366 38 128 64 chrX 107451388 107451529 -59198767 + GA-rich Low_complexity Low_complexity 5 154 0 5 1404 532 118 0 23 chrX 107451533 107451620 -59198676 + IAP-d-int LTR ERVK 93 177 -6365 5 1404 742 218 6 6 chrX 107451614 107451771 -59198525 + IAP-d-int LTR ERVK 347 503 -6039 5 1404 1404 116 112 0 chrX 107451771 107451995 -59198301 + IAP-d-int LTR ERVK 5007 5255 -1287 5 1404 2752 127 49 38 chrX 107451995 107452528 -59197768 + IAPEY3-int LTR ERVK 6965 7529 -151 5 1404 2558 64 0 0 chrX 107452530 107452842 -59197454 + RLTR10-int LTR ERVK 1486 1797 -190 5 1404 707 100 45 0 chrX 107452864 107452974 -59197322 + IAPEY3-int LTR ERVK 7566 7680 0 5 1404 1244 189 32 43 chrX 107452985 107453262 -59197034 + RLTR46 LTR ERVK 42 315 -5 5 1404 4625 136 65 4 chrX 107453269 107454039 -59196257 - L1Md_F LINE L1 -5411 1108 296 5 1404 801 374 113 58 chrX 107454044 107454109 -59196187 + MER21B LTR ERV1 65 122 -741 5 1404 339 25 0 0 chrX 107454109 107454149 -59196147 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 5 1404 491 244 46 0 chrX 107454149 107454280 -59196016 - B1_Mur1 SINE Alu -12 137 1 5 1404 801 374 113 58 chrX 107454280 107454852 -59195444 + MER21B LTR ERV1 123 737 -126 5 1404 414 289 0 0 chrX 107455119 107455216 -59195080 - RSINE1 SINE B4 -63 102 6 6 1404 887 281 72 43 chrX 107455785 107456134 -59194162 - RMER5 LTR ERV1 -90 444 86 6 1404 2018 47 5 19 chrX 107456134 107456401 -59193895 + L1Md_F3 LINE L1 6327 6619 -17 6 1404 240 325 12 24 chrX 107456406 107456491 -59193805 - RMER5 LTR ERV1 -381 153 70 6 1404 880 335 51 15 chrX 107457169 107457578 -59192718 + RMER5 LTR ERV1 40 463 -71 6 1404 1045 311 73 31 chrX 107457821 107458179 -59192117 - MTE2b LTR MaLR -5 374 2 6 1404 1021 126 18 36 chrX 107458241 107458406 -59191890 + ORR1A4 LTR MaLR 160 321 -8 6 1404 238 323 21 0 chrX 107458410 107458506 -59191790 - MTE2b-int LTR MaLR -20 1350 1253 6 1404 341 358 63 54 chrX 107458630 107458869 -59191427 - MTE2b-int LTR MaLR -816 764 524 6 1404 320 21 0 60 chrX 107458872 107458922 -59191374 + (T)n Simple_repeat Simple_repeat 1 47 0 6 1404 1153 68 0 0 chrX 107458922 107459069 -59191227 - B1_Mm SINE Alu 0 147 1 6 1404 1071 280 57 11 chrX 107459090 107459444 -59190852 - MTE2b-int LTR MaLR -1179 401 32 6 1404 1018 281 44 60 chrX 107459476 107459859 -59190437 - MTE2b LTR MaLR -2 377 1 6 1404 396 0 0 0 chrX 107460224 107460268 -59190028 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 1404 345 298 85 19 chrX 107460879 107460985 -59189311 + RSINE1 SINE B4 43 155 -10 6 1404 2013 62 4 0 chrX 107461304 107461563 -59188733 + L1Md_F2 LINE L1 6311 6570 -12 6 1404 4581 67 2 22 chrX 107461758 107462357 -59187939 + LTRIS_Mus LTR ERV1 1 587 0 6 1404 2342 149 47 33 chrX 107462508 107462932 -59187364 + RLTR23 LTR ERV1 1 430 0 6 1404 533 247 123 7 chrX 107463243 107463398 -59186898 - Lx8 LINE L1 -675 6798 6626 6 1404 3647 145 97 40 chrX 107463405 107464173 -59186123 - RLTR13C2 LTR ERVK -2 1021 1 6 1404 727 316 51 39 chrX 107464251 107464584 -59185712 - Lx8 LINE L1 -948 6525 6189 6 1404 224 167 0 20 chrX 107464626 107464675 -59185621 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1404 273 160 3 32 chrX 107464942 107465020 -59185276 + ORR1C1 LTR MaLR 1 77 -297 6 1404 347 226 54 20 chrX 107465035 107465159 -59185137 - L1_Rod LINE L1 -834 5309 5128 6 1404 560 318 72 51 chrX 107465159 107465451 -59184845 + Lx8 LINE L1 6939 7236 -237 6 1404 391 120 116 32 chrX 107465483 107465578 -59184718 - L1_Mus2 LINE L1 0 6566 6464 6 1404 952 256 35 44 chrX 107465729 107465804 -59184492 + L1M2 LINE L1 4709 4776 -1367 6 1404 1448 165 96 138 chrX 107465804 107466253 -59184043 + RLTR23 LTR ERV1 1 430 0 6 1404 952 256 35 44 chrX 107466253 107466496 -59183800 + L1M2 LINE L1 4777 5024 -1119 6 1404 1353 161 80 4 chrX 107468108 107468350 -59181946 + ORR1A2 LTR MaLR 1 262 -65 6 1404 1171 124 99 0 chrX 107468350 107468552 -59181744 + Lx2 LINE L1 6774 6995 -2 6 1404 1353 234 137 1882 chrX 107468552 107468602 -59181694 + ORR1A2 LTR MaLR 263 361 -6 6 1404 303 116 0 0 chrX 107468737 107468780 -59181516 + ORR1A2 LTR MaLR 276 318 -8 6 1404 3182 149 44 22 chrX 107468784 107469332 -59180964 + ORR1A2-int LTR MaLR 1 560 -1403 6 1404 254 272 10 98 chrX 107469294 107469396 -59180900 + MT2B LTR ERVL 128 220 -381 6 1404 260 236 28 0 chrX 107470344 107470416 -59179880 - MuLV-int LTR ERV1 -1496 6110 6037 6 1404 281 338 20 27 chrX 107470352 107470498 -59179798 - RNERVK23-int LTR ERVK -1880 6337 6193 6 1404 1331 323 38 58 chrX 107470889 107472012 -59178284 - RNERVK23-int LTR ERVK -1407 5999 4932 6 1404 465 19 0 0 chrX 107472217 107472271 -59178025 + (CA)n Simple_repeat Simple_repeat 1 54 0 6 1404 2269 311 75 59 chrX 107472271 107474616 -59175680 - RNERVK23-int LTR ERVK -3751 4466 2085 6 1404 270 0 0 0 chrX 107475392 107475422 -59174874 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1404 288 238 0 0 chrX 107475793 107475856 -59174440 - SRV_MM-int LTR ERVK -5607 560 498 6 1404 1734 41 5 5 chrX 107476263 107476485 -59173811 + L1Md_F3 LINE L1 6362 6583 -1 6 1404 412 130 0 172 chrX 107477219 107477312 -59172984 + MT2B LTR ERVL 211 287 -314 6 1404 6577 149 46 16 chrX 107477271 107478480 -59171816 + ORR1A2-int LTR MaLR 718 1963 0 6 1404 1671 158 74 0 chrX 107478480 107478777 -59171519 + ORR1A2 LTR MaLR 1 319 -8 6 1405 2028 351 88 56 chrX 107480137 107481589 -59168707 - MTEb-int LTR MaLR -43 1537 2 6 1405 239 307 0 22 chrX 107481604 107481694 -59168602 - MTEb LTR MaLR -17 362 275 6 1405 339 341 43 7 chrX 107482130 107482269 -59168027 + B1F1 SINE Alu 6 149 0 6 1405 1220 6 0 40 chrX 107484177 107484353 -59165943 + (CAAGG)n Simple_repeat Simple_repeat 3 171 0 6 1405 23 33 0 0 chrX 107484389 107484419 -59165877 + AT_rich Low_complexity Low_complexity 1 30 0 6 1405 2002 272 23 54 chrX 107484531 107485179 -59165117 - Lx7 LINE L1 -277 7419 6792 6 1405 1036 113 0 0 chrX 107485180 107485331 -59164965 - URR1B DNA MER1_type -1 224 74 6 1405 2108 126 3 0 chrX 107485334 107485652 -59164644 + ORR1A2 LTR MaLR 1 319 -8 6 1405 253 268 82 27 chrX 107485654 107485727 -59164569 - URR1B DNA MER1_type -148 77 1 6 1405 1638 248 19 28 chrX 107485732 107486155 -59164141 - Lx7 LINE L1 -902 6794 6376 6 1405 529 350 34 20 chrX 107486168 107486465 -59163831 - Lx8 LINE L1 -134 7339 7039 6 1405 243 0 0 0 chrX 107486520 107486547 -59163749 + (TA)n Simple_repeat Simple_repeat 1 27 0 6 1405 661 314 100 86 chrX 107486649 107486909 -59163387 - MT2A LTR ERVL -98 435 180 6 1405 213 39 0 0 chrX 107486909 107486935 -59163361 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 6 1405 661 314 100 86 chrX 107486935 107487103 -59163193 - MT2A LTR ERVL -354 179 1 6 1405 555 310 99 101 chrX 107487108 107487524 -59162772 - MTE-int LTR MaLR -6 1574 1160 6 1405 1837 283 90 37 chrX 107487530 107487625 -59162671 - MERVL_2A-int LTR ERVL -161 5596 5496 6 1405 2121 65 81 3 chrX 107487625 107487934 -59162362 - L1_Mus2 LINE L1 0 6566 6234 6 1405 2168 257 70 40 chrX 107487934 107488591 -59161705 - MERVL_2A-int LTR ERVL -222 5539 4805 6 1405 230 81 0 26 chrX 107489342 107489380 -59160916 + (TTTC)n Simple_repeat Simple_repeat 2 38 0 6 1405 21 71 0 0 chrX 107490762 107490804 -59159492 + AT_rich Low_complexity Low_complexity 1 42 0 6 1405 26 30 0 0 chrX 107490975 107491008 -59159288 + AT_rich Low_complexity Low_complexity 1 33 0 6 1405 240 111 0 0 chrX 107491375 107491411 -59158885 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 1405 226 220 53 35 chrX 107492864 107492977 -59157319 - Lx9 LINE L1 -1 7643 7529 6 1405 431 78 16 0 chrX 107493226 107493290 -59157006 + (TA)n Simple_repeat Simple_repeat 2 66 0 6 1405 21 57 0 0 chrX 107493447 107493482 -59156814 + AT_rich Low_complexity Low_complexity 1 35 0 6 1405 2136 113 144 47 chrX 107495288 107495697 -59154599 - Lx LINE L1 -3 6651 6203 6 1405 572 99 8 95 chrX 107496588 107496855 -59153441 + CT-rich Low_complexity Low_complexity 1 243 0 6 1405 788 164 13 0 chrX 107497753 107497905 -59152391 + GA-rich Low_complexity Low_complexity 2 155 0 6 1405 21 0 0 0 chrX 107499096 107499117 -59151179 + AT_rich Low_complexity Low_complexity 1 21 0 6 1405 225 264 11 44 chrX 107500631 107500722 -59149574 - PB1D10 SINE Alu 0 117 30 1 1405 28 0 0 0 chrX 107501974 107502002 -59148294 + AT_rich Low_complexity Low_complexity 1 28 0 2 1405 261 0 0 0 chrX 107502144 107502173 -59148123 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 1405 186 43 0 0 chrX 107502178 107502201 -59148095 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 1405 351 0 0 0 chrX 107502201 107502239 -59148057 + (TAA)n Simple_repeat Simple_repeat 1 39 0 5 1405 256 290 3 6 chrX 107502255 107502325 -59147971 + ID4 SINE ID 2 70 -13 6 1405 424 0 36 0 chrX 107502462 107502518 -59147778 + (TCTA)n Simple_repeat Simple_repeat 2 59 0 7 1405 29 90 0 0 chrX 107505359 107505437 -59144859 + AT_rich Low_complexity Low_complexity 1 78 0 8 1405 270 0 0 0 chrX 107505493 107505523 -59144773 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 9 1405 454 360 13 46 chrX 107505544 107505783 -59144513 - Lx8 LINE L1 -243 7230 7000 1 1405 6756 53 1 0 chrX 107505797 107506851 -59143445 + L1Md_F2 LINE L1 5366 6420 -162 1 1405 480 162 39 39 chrX 107506885 107507039 -59143257 + RMER17B LTR ERVK 307 460 -498 1 1405 295 361 41 7 chrX 107507065 107507210 -59143086 + MIRb SINE MIR 60 209 -59 1 1405 22 35 0 0 chrX 107507440 107507469 -59142827 + AT_rich Low_complexity Low_complexity 1 29 0 1 1405 301 308 134 85 chrX 107507770 107508077 -59142219 - ORR1D1 LTR MaLR 0 378 55 1 1405 942 289 4 27 chrX 107508518 107508840 -59141456 - L1MC1 LINE L1 -328 6031 5724 1 1405 694 80 257 0 chrX 107509147 107509260 -59141036 + B1_Mus1 SINE Alu 2 143 -5 1 1405 347 149 0 65 chrX 107509380 107509473 -59140823 - Lx9 LINE L1 -80 7564 7478 1 1405 2847 213 95 70 chrX 107509476 107510349 -59139947 - Lx9 LINE L1 -128 7516 6622 1 1405 29 60 0 0 chrX 107510389 107510439 -59139857 + AT_rich Low_complexity Low_complexity 1 50 0 2 1405 26 30 0 0 chrX 107510762 107510795 -59139501 + AT_rich Low_complexity Low_complexity 1 33 0 2 1405 855 242 18 28 chrX 107511734 107511951 -59138345 - B3 SINE B2 -1 215 1 2 1405 187 279 36 48 chrX 107512177 107512260 -59138036 + MIR SINE MIR 110 191 -71 2 1405 183 278 13 65 chrX 107513897 107513974 -59136322 + MIRc SINE MIR 154 226 -42 2 1405 206 318 76 0 chrX 107515148 107515214 -59135082 - MIRc SINE MIR -41 227 157 2 1405 213 266 45 30 chrX 107515341 107515407 -59134889 - MIR SINE MIR -135 133 67 2 1405 225 345 49 28 chrX 107516347 107516490 -59133806 - MIR SINE MIR -43 219 74 2 1405 288 227 48 58 chrX 107517006 107517109 -59133187 - Lx8 LINE L1 0 7473 7372 2 1405 413 36 18 0 chrX 107517739 107517794 -59132502 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1405 24 32 0 0 chrX 107518095 107518126 -59132170 + AT_rich Low_complexity Low_complexity 1 31 0 2 1405 236 316 64 45 chrX 107518165 107518321 -59131975 - MIRb SINE MIR -45 223 65 3 1405 1308 232 155 90 chrX 107518617 107518907 -59131389 + RMER6D LTR ERVK 1 326 -394 3 1405 2092 35 4 4 chrX 107518907 107519166 -59131130 + L1Md_F2 LINE L1 6324 6582 0 3 1405 1308 232 155 90 chrX 107519166 107519444 -59130852 + RMER6D LTR ERVK 327 605 -115 3 1405 232 218 12 37 chrX 107519642 107519723 -59130573 - L1MC4a LINE L1 -1198 6684 6606 3 1405 27 49 0 0 chrX 107519738 107519779 -59130517 + AT_rich Low_complexity Low_complexity 1 41 0 3 1405 266 293 113 57 chrX 107519799 107519958 -59130338 - L1MC4a LINE L1 -2221 5661 5494 3 1405 778 192 13 40 chrX 107520042 107520194 -59130102 - B1_Mur3 SINE Alu 0 149 2 3 1405 22 35 0 0 chrX 107520507 107520536 -59129760 + AT_rich Low_complexity Low_complexity 1 29 0 3 1405 246 156 31 15 chrX 107521793 107521858 -59128438 + GA-rich Low_complexity Low_complexity 3 68 0 3 1405 23 33 0 0 chrX 107522972 107523002 -59127294 + AT_rich Low_complexity Low_complexity 1 30 0 3 1405 422 291 24 7 chrX 107523337 107523545 -59126751 - L1MA5 LINE L1 -6 6294 6081 3 1405 1198 151 5 0 chrX 107524055 107524254 -59126042 + RLTR19 LTR ERVK 9 208 -291 4 1405 11188 24 1 1 chrX 107524254 107526250 -59124046 - L1Md_T LINE L1 -1 6581 4586 4 1405 500 29 0 0 chrX 107526236 107526304 -59123992 + L1Md_Gf LINE L1 1072 1139 -5383 4 1405 1533 183 36 49 chrX 107526305 107526610 -59123686 + RLTR19 LTR ERVK 199 499 0 4 1405 357 280 173 28 chrX 107527009 107527332 -59122964 - Zaphod DNA Tip100 -233 3798 3429 4 1405 26 30 0 0 chrX 107527470 107527503 -59122793 + AT_rich Low_complexity Low_complexity 1 33 0 4 1405 1391 292 66 25 chrX 107527842 107528372 -59121924 - Lx8 LINE L1 0 7473 6922 4 1405 288 70 0 0 chrX 107528381 107528424 -59121872 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1405 586 148 13 0 chrX 107528424 107528524 -59121772 - B1_Mus1 SINE Alu -9 111 2 4 1405 1776 111 21 89 chrX 107528584 107528921 -59121375 - ORR1A3 LTR MaLR -7 319 6 4 1405 22 0 0 0 chrX 107529040 107529062 -59121234 + AT_rich Low_complexity Low_complexity 1 22 0 4 1405 245 301 184 0 chrX 107529173 107529276 -59121020 + B2_Mm2 SINE B2 2 123 -72 5 1405 647 245 105 35 chrX 107529364 107529592 -59120704 - Zaphod DNA Tip100 -1227 2804 2561 4 1405 3289 157 106 22 chrX 107529926 107530615 -59119681 + RMER6A LTR ERVK 1 747 -9 5 1405 1008 271 92 12 chrX 107530667 107530992 -59119304 + ORR1D2 LTR MaLR 20 370 0 5 1405 1209 276 43 70 chrX 107530992 107531409 -59118887 + ORR1D2-int LTR MaLR 1 406 -964 5 1405 14723 124 21 5 chrX 107531409 107533093 -59117203 + L1_Mus3 LINE L1 3516 5242 -641 5 1405 351 0 0 0 chrX 107533093 107533132 -59117164 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1405 14723 111 9 5 chrX 107533132 107534524 -59115772 + L1_Mus3 LINE L1 5243 6630 -8 5 1405 988 254 48 80 chrX 107534526 107534877 -59115419 + ORR1D2-int LTR MaLR 383 722 -648 5 1405 742 236 39 39 chrX 107534850 107535057 -59115239 + ORR1D2-int LTR MaLR 1164 1370 0 5 1405 992 229 42 13 chrX 107535057 107535296 -59115000 + ORR1D2 LTR MaLR 1 246 -124 5 1405 2238 215 6 18 chrX 107535321 107535813 -59114483 - L1_Mur3 LINE L1 -1748 4132 3647 5 1405 1857 137 148 18 chrX 107535822 107536288 -59114008 - Lx LINE L1 -6 6648 6035 5 1405 305 215 0 15 chrX 107536346 107536412 -59113884 + ORR1D2 LTR MaLR 306 370 0 5 1405 235 368 19 9 chrX 107536668 107536775 -59113521 - Zaphod DNA Tip100 -1453 2578 2471 4 1405 2149 152 97 2 chrX 107537269 107537672 -59112624 - BGLII_B LTR ERVK 0 441 1 5 1405 693 191 12 31 chrX 107537996 107538158 -59112138 - Lx7 LINE L1 0 7696 7538 5 1405 673 183 7 7 chrX 107538163 107538317 -59111979 + (TA)n Simple_repeat Simple_repeat 2 155 0 5 1405 631 217 17 28 chrX 107538319 107538499 -59111797 - Lx7 LINE L1 -157 7539 7362 5 1405 447 278 54 83 chrX 107538586 107538790 -59111506 - B3A SINE B2 0 198 1 6 1405 489 332 102 65 chrX 107538848 107539522 -59110774 - Zaphod DNA Tip100 -2206 1825 1127 4 1405 441 360 53 0 chrX 107539585 107539735 -59110561 - RSINE1 SINE B4 -6 159 2 6 1405 2274 30 0 7 chrX 107539821 107540094 -59110202 + L1Md_F2 LINE L1 6298 6568 -14 6 1405 1091 230 106 58 chrX 107540448 107540826 -59109470 + RMER10B LTR ERVL 3 398 0 6 1405 383 297 101 77 chrX 107540827 107541035 -59109261 - Zaphod DNA Tip100 -3511 520 308 4 1405 1422 166 58 147 chrX 107541565 107541947 -59108349 + ORR1B1 LTR MaLR 39 386 -8 6 1405 416 35 17 0 chrX 107541949 107542007 -59108289 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 1405 252 0 0 0 chrX 107542587 107542615 -59107681 + (CAA)n Simple_repeat Simple_repeat 2 29 0 6 1405 330 45 0 0 chrX 107543427 107543471 -59106825 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1405 306 316 41 0 chrX 107543529 107543627 -59106669 - Lx8 LINE L1 -259 7214 7113 6 1405 362 58 0 0 chrX 107544371 107544423 -59105873 - L1Md_F3 LINE L1 -14 6570 6519 6 1405 2325 62 0 0 chrX 107544423 107544715 -59105581 + L1_Mm LINE L1 4667 4958 -925 7 1405 197 33 33 0 chrX 107544788 107544818 -59105478 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 7 1405 23 0 0 0 chrX 107546203 107546226 -59104070 + AT_rich Low_complexity Low_complexity 1 23 0 7 1405 258 264 85 7 chrX 107546272 107546413 -59103883 + Tigger7 DNA MER2_type 2256 2407 -84 7 1405 186 214 0 67 chrX 107547292 107547337 -59102959 + MIRb SINE MIR 194 235 -33 7 1405 627 75 0 0 chrX 107547414 107547508 -59102788 + (GA)n Simple_repeat Simple_repeat 1 94 0 7 1405 202 122 73 0 chrX 107547610 107547651 -59102645 + A-rich Low_complexity Low_complexity 5 48 0 7 1405 243 330 182 25 chrX 107547740 107547752 -59102544 - ID_B1 SINE B4 -6 218 163 7 1405 245 322 43 11 chrX 107547752 107547846 -59102450 - PB1 SINE Alu -18 109 13 7 1405 243 330 182 25 chrX 107547846 107547861 -59102435 - ID_B1 SINE B4 -6 162 79 7 1405 734 309 10 20 chrX 107549080 107549275 -59101021 - B3A SINE B2 -5 193 1 7 1405 300 53 0 0 chrX 107549483 107549521 -59100775 + (TA)n Simple_repeat Simple_repeat 2 39 0 8 1405 23 33 0 0 chrX 107550310 107550340 -59099956 + AT_rich Low_complexity Low_complexity 1 30 0 8 1405 30 0 0 0 chrX 107550778 107550808 -59099488 + AT_rich Low_complexity Low_complexity 1 30 0 8 1405 522 0 0 0 chrX 107551507 107551565 -59098731 + (TC)n Simple_repeat Simple_repeat 1 58 0 8 1405 751 265 195 27 chrX 107551892 107551917 -59098379 - L1_Rod LINE L1 -280 5567 5549 8 1405 180 0 0 0 chrX 107551917 107551937 -59098359 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 8 1405 751 265 195 27 chrX 107551937 107552280 -59098016 - L1_Rod LINE L1 -299 5548 5137 8 1405 738 0 0 0 chrX 107552285 107552367 -59097929 + (TTC)n Simple_repeat Simple_repeat 1 82 0 8 1405 420 152 41 41 chrX 107552539 107552662 -59097634 - Lx9 LINE L1 -2 7642 7520 8 1405 351 65 0 0 chrX 107552663 107552709 -59097587 + (TA)n Simple_repeat Simple_repeat 2 47 0 8 1405 8318 32 0 0 chrX 107552806 107554058 -59096238 - L1Md_T LINE L1 0 6582 5331 8 1405 489 291 56 19 chrX 107554057 107554323 -59095973 - L1_Mur3 LINE L1 -2154 3726 3451 9 1405 345 198 20 20 chrX 107554332 107554430 -59095866 - L1_Rod LINE L1 -3876 1971 1874 9 1405 335 196 155 0 chrX 107554437 107554534 -59095762 + L1_Rod LINE L1 3769 3880 -1967 9 1405 261 57 0 0 chrX 107554607 107554642 -59095654 + (TCTG)n Simple_repeat Simple_repeat 1 35 0 9 1405 229 300 0 54 chrX 107555193 107555267 -59095029 + RMER30 DNA MER1_type 8 77 -125 9 1405 225 330 9 19 chrX 107555377 107555482 -59094814 - L1M2 LINE L1 -392 5908 5805 9 1405 732 136 13 52 chrX 107555571 107555726 -59094570 - L1_Mus3 LINE L1 -7 6631 6483 9 1405 414 0 0 0 chrX 107555727 107555773 -59094523 + (TC)n Simple_repeat Simple_repeat 1 46 0 9 1405 753 215 0 22 chrX 107555773 107555911 -59094385 - B1_Mur2 SINE Alu -13 136 2 9 1405 399 307 62 12 chrX 107555926 107556167 -59094129 - L1M2 LINE L1 -589 5711 5459 9 1405 320 287 64 0 chrX 107556167 107556261 -59094035 - PB1D10 SINE Alu -35 114 15 9 1405 334 220 188 78 chrX 107556424 107556552 -59093744 + MLT2C1 LTR ERVL 197 338 -59 1 1405 265 200 47 19 chrX 107556563 107556670 -59093626 + (TA)n Simple_repeat Simple_repeat 1 110 0 1 1405 573 318 20 41 chrX 107557473 107557670 -59092626 + MTE2a LTR MaLR 164 356 -23 1 1405 836 296 27 9 chrX 107558250 107558475 -59091821 - ORR1D2 LTR MaLR -137 233 5 1 1405 825 296 69 45 chrX 107558480 107558760 -59091536 + MTD LTR MaLR 35 320 -99 1 1405 2027 128 86 0 chrX 107558760 107559097 -59091199 + ORR1B2 LTR MaLR 2 367 0 1 1405 825 304 89 65 chrX 107559097 107559183 -59091113 + MTD LTR MaLR 281 378 -1 1 1405 347 56 19 0 chrX 107559840 107559894 -59090402 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 1 1405 721 227 61 0 chrX 107559894 107560026 -59090270 - B1_Mur4 SINE Alu -9 141 2 1 1405 22 35 0 0 chrX 107561340 107561369 -59088927 + AT_rich Low_complexity Low_complexity 1 29 0 1 1405 27 0 0 0 chrX 107562339 107562366 -59087930 + AT_rich Low_complexity Low_complexity 1 27 0 1 1405 731 90 10 0 chrX 107562382 107562482 -59087814 - B2_Mm2 SINE B2 -94 101 1 1 1405 1441 92 9 17 chrX 107562750 107562982 -59087314 - L1Md_F2 LINE L1 0 6582 6353 1 1405 7850 67 55 2 chrX 107562987 107564740 -59085556 - L1Md_F2 LINE L1 -3 6579 4749 1 1405 419 0 0 19 chrX 107564933 107564985 -59085311 + (TTTTG)n Simple_repeat Simple_repeat 5 55 0 1 1405 229 275 93 7 chrX 107564990 107565129 -59085167 - L1M4 LINE L1 -338 5836 5686 1 1405 240 210 30 61 chrX 107565439 107565505 -59084791 - MER5B DNA MER1_type -1 177 114 1 1405 26 0 0 0 chrX 107565592 107565618 -59084678 + AT_rich Low_complexity Low_complexity 1 26 0 1 1405 2736 237 114 39 chrX 107565655 107566416 -59083880 - RMER1B Other Other -5 1061 244 1 1405 2588 188 39 17 chrX 107566416 107566936 -59083360 + ORR1C2-int LTR MaLR 979 1509 0 1 1405 1696 221 67 8 chrX 107566936 107567297 -59082999 + ORR1C2 LTR MaLR 1 382 -2 1 1405 534 103 0 0 chrX 107567370 107567457 -59082839 + L1_Mus3 LINE L1 6551 6637 -1 1 1405 369 0 0 0 chrX 107570737 107570778 -59079518 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1405 387 0 0 0 chrX 107570778 107570820 -59079476 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1405 1283 309 26 6 chrX 107571713 107572061 -59078235 - ORR1E LTR MaLR 0 359 5 1 1405 21 0 0 0 chrX 107573601 107573622 -59076674 + AT_rich Low_complexity Low_complexity 1 21 0 1 1405 668 285 0 0 chrX 107573647 107573777 -59076519 + RSINE1 SINE B4 5 134 -31 1 1405 21 57 0 0 chrX 107573815 107573850 -59076446 + AT_rich Low_complexity Low_complexity 1 35 0 1 1405 2118 210 7 12 chrX 107574568 107574978 -59075318 + MTC LTR MaLR 6 413 -8 1 1405 598 262 76 27 chrX 107574961 107575145 -59075151 + B3 SINE B2 20 212 -4 1 1405 855 300 30 83 chrX 107575288 107575689 -59074607 - MTE2a LTR MaLR -14 405 24 1 1405 2792 31 2 168 chrX 107576037 107576502 -59073794 - RLTR10 LTR ERVK -2 388 1 1 1405 378 0 0 0 chrX 107576799 107576841 -59073455 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 1 1405 1020 301 52 46 chrX 107577080 107577560 -59072736 - Lx9 LINE L1 -741 6903 6421 1 1405 845 258 32 14 chrX 107577566 107577845 -59072451 - L1_Rod LINE L1 -1065 4782 4499 1 1405 322 298 168 14 chrX 107577886 107578029 -59072267 + MER5A1 DNA MER1_type 2 166 0 1 1405 466 376 111 22 chrX 107578041 107578490 -59071806 + Charlie1a DNA MER1_type 7 495 -960 1 1405 808 284 141 23 chrX 107578698 107579173 -59071123 + Charlie1a DNA MER1_type 423 953 -502 1 1405 273 361 60 40 chrX 107579257 107579456 -59070840 + MER92C LTR ERV1 317 519 -35 1 1405 1869 237 38 46 chrX 107579623 107580092 -59070204 + Lx9 LINE L1 6640 7097 -547 1 1405 2594 153 19 2 chrX 107580092 107580524 -59069772 + BGLII_B LTR ERVK 1 439 -2 1 1405 1869 237 38 46 chrX 107580524 107580576 -59069720 + Lx9 LINE L1 7098 7157 -487 1 1405 7296 77 3 1 chrX 107580763 107581715 -59068581 - L1_Mus1 LINE L1 -2 6565 5636 1 1405 37747 46 2 8 chrX 107581901 107588100 -59062196 - L1Md_F2 LINE L1 -1 6581 422 1 1405 1752 130 0 10 chrX 107588101 107588396 -59061900 - L1Md_F LINE L1 -1456 4427 4136 1 1405 2402 142 24 30 chrX 107588383 107588887 -59061409 - L1Md_F LINE L1 -4289 1594 1156 1 1405 1151 81 0 0 chrX 107588887 107589035 -59061261 - B1_Mus1 SINE Alu 0 148 1 1 1405 2082 207 59 129 chrX 107589035 107589851 -59060445 - L1Md_F LINE L1 -5483 1155 301 1 1405 216 0 0 0 chrX 107589953 107589977 -59060319 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1405 1052 64 0 7 chrX 107590168 107590310 -59059986 + B1_Mus1 SINE Alu 6 146 -2 1 1405 246 32 0 0 chrX 107590312 107590343 -59059953 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1 1405 328 271 167 29 chrX 107590438 107590815 -59059481 - L1MEc LINE L1 -3401 3163 2735 1 1405 423 0 0 0 chrX 107591378 107591425 -59058871 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1405 846 231 86 46 chrX 107591610 107591914 -59058382 - Lx7 LINE L1 -1 7695 7380 1 1405 450 0 0 0 chrX 107591937 107591987 -59058309 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 1405 249 152 10 80 chrX 107592008 107592108 -59058188 + A-rich Low_complexity Low_complexity 2 94 0 1 1405 4614 248 25 27 chrX 107592113 107593271 -59057025 - Lx7 LINE L1 -329 7367 6212 1 1405 6086 202 65 21 chrX 107593339 107593893 -59056403 - L1_Mur3 LINE L1 -2144 3736 3115 1 1405 351 0 0 0 chrX 107593893 107593932 -59056364 + (TTTTG)n Simple_repeat Simple_repeat 4 42 0 1 1405 6086 202 65 21 chrX 107593932 107594691 -59055605 - L1_Mur3 LINE L1 -2766 3114 2352 1 1405 943 269 167 64 chrX 107594691 107595235 -59055061 - MT2B LTR ERVL 0 601 2 1 1405 6086 202 65 21 chrX 107595235 107595540 -59054756 - L1_Mur3 LINE L1 -3529 2351 2045 1 1405 432 320 130 41 chrX 107595587 107596118 -59054178 - L1MEc LINE L1 -4180 2465 1888 1 1405 991 352 71 68 chrX 107596376 107597169 -59053127 + MTE-int LTR MaLR 239 1033 -547 1 1405 183 80 0 0 chrX 107597406 107597431 -59052865 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1 1405 29809 106 18 32 chrX 107597433 107602154 -59048142 - Lx3A LINE L1 -8 6973 2337 1 1405 1904 58 0 0 chrX 107602154 107602394 -59047902 + L1Md_T LINE L1 6343 6582 0 1 1405 29809 103 13 22 chrX 107602394 107603929 -59046367 - Lx3A LINE L1 -3550 2336 783 1 1405 6227 68 0 6 chrX 107603934 107604739 -59045557 - L1Md_F2 LINE L1 -12 6570 5771 1 1405 1615 45 0 0 chrX 107604740 107604939 -59045357 - L1_Mm LINE L1 -1385 4498 4300 1 1405 2674 54 0 3 chrX 107604933 107605268 -59045028 + L1Md_F2 LINE L1 5253 5586 -297 1 1405 7661 52 13 40 chrX 107605268 107606291 -59044005 + L1Md_F2 LINE L1 5587 6581 -1 1 1405 896 57 0 16 chrX 107606456 107606580 -59043716 + (TCTCCC)n Simple_repeat Simple_repeat 3 124 0 1 1405 225 0 0 0 chrX 107606582 107606607 -59043689 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1405 245 339 20 25 chrX 107606612 107606779 -59043517 - L1MEc LINE L1 -6364 387 244 1 1405 460 291 43 36 chrX 107607800 107607939 -59042357 - ID_B1 SINE B4 0 224 85 1 1405 403 362 119 18 chrX 107608012 107608355 -59041941 + MTE-int LTR MaLR 1 378 -1202 1 1405 979 171 43 0 chrX 107608355 107608542 -59041754 - Lx2 LINE L1 0 6997 6803 1 1405 931 79 0 0 chrX 107608617 107608743 -59041553 - B1_Mm SINE Alu 0 147 22 1 1405 228 320 51 0 chrX 107608909 107608987 -59041309 + MLT-int LTR MaLR 676 757 -978 1 1405 29 47 0 0 chrX 107609524 107609567 -59040729 + AT_rich Low_complexity Low_complexity 1 43 0 1 1405 422 328 65 93 chrX 107609585 107609938 -59040358 + L1M4c LINE L1 1087 1429 -4955 1 175 1886 194 54 5 chrX 107609938 107610348 -59039948 - L1_Mur3 LINE L1 -279 5601 5172 1 1406 1760 209 0 3 chrX 107610350 107610701 -59039595 + L1_Mur3 LINE L1 4859 5208 -669 1 1406 956 86 71 0 chrX 107611031 107611171 -59039125 - L1_Mus2 LINE L1 0 6566 6417 1 1406 417 95 0 0 chrX 107611952 107612015 -59038281 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 1406 35332 37 1 1 chrX 107612157 107618199 -59032097 + L1Md_T LINE L1 1 5588 -298 1 1406 8823 13 0 0 chrX 107618200 107619196 -59031100 + L1Md_T LINE L1 5590 6585 0 1 1406 315 0 0 0 chrX 107619273 107619308 -59030988 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 1 1406 294 242 79 48 chrX 107619568 107619733 -59030563 + L1M4 LINE L1 5168 5337 -809 1 1406 437 341 29 29 chrX 107619972 107620111 -59030185 - RSINE1 SINE B4 -24 141 3 1 1406 248 267 51 38 chrX 107620189 107620304 -59029992 + L1M4 LINE L1 5377 5496 -666 1 1406 3722 245 48 75 chrX 107620479 107621627 -59028669 + Lx9 LINE L1 6344 7460 -184 1 1406 966 44 15 0 chrX 107621969 107622105 -59028191 + L1Md_F2 LINE L1 6433 6570 -12 1 1406 3053 178 105 19 chrX 107622435 107623071 -59027225 + RLTR17 LTR ERVK 1 691 -1 1 1406 333 102 0 0 chrX 107623318 107623377 -59026919 + (GA)n Simple_repeat Simple_repeat 2 60 0 1 1406 307 153 0 89 chrX 107623383 107623462 -59026834 + HAL1-3A_ME LINE L1 1975 2046 -812 1 1406 675 340 44 68 chrX 107623475 107623703 -59026593 + Lx7 LINE L1 3455 3691 -2452 1 1406 947 317 35 3 chrX 107623703 107624070 -59026226 - MTEb LTR MaLR 0 379 1 1 1406 675 340 44 68 chrX 107624070 107624384 -59025912 + Lx7 LINE L1 3692 3984 -2159 1 1406 1010 207 10 0 chrX 107624384 107624587 -59025709 + Lx4A LINE L1 6854 7058 0 1 1406 675 340 44 68 chrX 107624587 107624788 -59025508 + Lx7 LINE L1 3985 4181 -1962 1 1406 7287 83 28 4 chrX 107624824 107626523 -59023773 - L1_Mus1 LINE L1 0 6567 4810 1 1406 527 284 92 34 chrX 107626583 107627007 -59023289 + Lx7 LINE L1 4744 5269 -874 1 1406 26 98 0 0 chrX 107627008 107627090 -59023206 + AT_rich Low_complexity Low_complexity 1 82 0 1 1406 239 318 135 12 chrX 107627104 107627359 -59022937 + Lx7 LINE L1 5273 5596 -704 1 1406 381 158 0 0 chrX 107627398 107627499 -59022797 + (CAGA)n Simple_repeat Simple_repeat 4 104 0 1 1406 1858 73 4 4 chrX 107627548 107627796 -59022500 + L1_Mus1 LINE L1 6314 6561 -6 1 1406 204 185 0 0 chrX 107627799 107627853 -59022443 + A-rich Low_complexity Low_complexity 1 54 0 1 1406 270 276 69 32 chrX 107627853 107628085 -59022211 + Lx7 LINE L1 5620 5898 -402 1 1406 354 45 0 0 chrX 107628169 107628213 -59022083 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1406 213 288 14 14 chrX 107628223 107628297 -59021999 + GA-rich Low_complexity Low_complexity 4 77 0 1 1406 40542 14 1 6 chrX 107628426 107634781 -59015515 - L1Md_A LINE L1 -2 6580 261 1 1406 365 303 65 14 chrX 107634933 107635147 -59015149 + L1MB5 LINE L1 5371 5595 -585 1 1406 395 346 97 14 chrX 107635221 107635523 -59014773 + L1MB5 LINE L1 5694 6025 -149 1 1406 527 222 16 23 chrX 107635615 107635744 -59014552 - MTC LTR MaLR -15 406 279 1 1406 31 0 0 0 chrX 107635804 107635835 -59014461 + AT_rich Low_complexity Low_complexity 1 31 0 1 1406 383 297 15 9 chrX 107635864 107636006 -59014290 - Lx9 LINE L1 -475 7169 6895 1 1406 516 333 25 5 chrX 107636006 107636205 -59014091 - MTC LTR MaLR -199 220 18 1 1406 27 92 0 0 chrX 107636225 107636301 -59013995 + AT_rich Low_complexity Low_complexity 1 76 0 1 1406 423 365 63 57 chrX 107636793 107637155 -59013141 - ORR1E LTR MaLR 0 379 2 1 1406 730 299 173 3 chrX 107637237 107637583 -59012713 - MTD LTR MaLR -14 405 1 1 1406 228 237 100 17 chrX 107640477 107640537 -59009759 + LTR86A1 LTR ERVL 196 260 -253 1 1406 35351 43 1 3 chrX 107640804 107646052 -59004244 + L1Md_T LINE L1 255 5589 -297 2 1406 8309 35 0 0 chrX 107646052 107647036 -59003260 + L1Md_T LINE L1 5590 6573 -12 2 1406 534 294 101 21 chrX 107647065 107647253 -59003043 - MER31A LTR ERV1 -59 407 205 2 1406 776 307 89 34 chrX 107648172 107648759 -59001537 - MER31-int LTR ERV1 -815 4121 3503 2 1406 828 241 11 0 chrX 107648768 107648959 -59001337 + ORR1D2 LTR MaLR 178 370 0 2 1406 24 0 0 0 chrX 107650731 107650755 -58999541 + AT_rich Low_complexity Low_complexity 1 24 0 2 1406 5672 179 55 16 chrX 107650755 107651191 -58999105 - Lx4A LINE L1 -2 7056 6612 2 1406 225 0 0 0 chrX 107651191 107651216 -58999080 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 1406 5672 179 55 16 chrX 107651216 107651669 -58998627 - Lx4A LINE L1 -447 6611 6123 2 1406 2788 61 55 13 chrX 107651669 107652049 -58998247 - MTA_Mm LTR MaLR 0 396 1 2 1406 5672 179 55 16 chrX 107652049 107652273 -58998023 - Lx4A LINE L1 -936 6122 5899 2 1406 3196 78 0 5 chrX 107653429 107653855 -58996441 - L1_Mus1 LINE L1 -1 6566 6143 2 1406 2282 79 28 3 chrX 107654461 107654780 -58995516 + IAPLTR2b LTR ERVK 1 327 0 2 1406 21 0 0 0 chrX 107655092 107655113 -58995183 + AT_rich Low_complexity Low_complexity 1 21 0 2 1406 21 36 0 0 chrX 107655574 107655602 -58994694 + AT_rich Low_complexity Low_complexity 1 28 0 2 1406 786 304 5 0 chrX 107655609 107655813 -58994483 - B3 SINE B2 -10 206 2 2 1406 183 154 71 71 chrX 107657216 107657258 -58993038 - L3 LINE CR1 -843 3646 3605 2 1406 874 268 63 4 chrX 107657873 107658190 -58992106 + Lx7 LINE L1 5593 5925 -1548 2 1406 21 57 0 0 chrX 107658352 107658387 -58991909 + AT_rich Low_complexity Low_complexity 1 35 0 2 1406 808 288 46 4 chrX 107658649 107658890 -58991406 - Lx6 LINE L1 -31 7429 7179 2 1406 4472 137 36 20 chrX 107658960 107659715 -58990581 + Lx2 LINE L1 6231 6997 0 2 1406 1786 155 4 0 chrX 107660170 107660448 -58989848 + RMER19A LTR ERVK 457 735 -2 2 1406 2023 198 42 0 chrX 107660451 107660885 -58989411 - L1_Mur3 LINE L1 -3368 2512 2061 2 1406 1024 249 17 70 chrX 107660886 107661188 -58989108 - L1_Mur3 LINE L1 -7010 718 433 2 1406 7597 85 10 40 chrX 107661191 107662343 -58987953 + Lx3_Mus LINE L1 5892 7009 0 2 1406 25 51 0 0 chrX 107662364 107662403 -58987893 + AT_rich Low_complexity Low_complexity 1 39 0 2 1406 475 327 53 24 chrX 107662417 107662624 -58987672 - B3 SINE B2 0 216 4 2 1406 1885 200 108 72 chrX 107662645 107663147 -58987149 - RLTR24 LTR ERV1 0 529 10 2 1406 1667 246 62 44 chrX 107663211 107663803 -58986493 - L1_Rod LINE L1 -3145 3001 2385 2 1406 524 114 0 0 chrX 107663803 107663891 -58986405 - L1_Mus3 LINE L1 -4 6634 6547 2 1406 1667 244 62 45 chrX 107663891 107664013 -58986283 - L1_Rod LINE L1 -3463 2384 2263 2 1406 297 310 166 17 chrX 107664019 107664314 -58985982 - L1_Rod LINE L1 -3735 2112 1774 2 1406 266 207 18 0 chrX 107664641 107664697 -58985599 + Lx8 LINE L1 7072 7122 -351 2 1406 420 20 0 0 chrX 107664702 107664751 -58985545 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1406 339 296 197 9 chrX 107665116 107665334 -58984962 - L1M5 LINE L1 -2028 4118 3860 2 1406 1709 143 203 8 chrX 107666036 107666396 -58983900 - RLTR23 LTR ERV1 0 430 1 2 1406 374 100 17 0 chrX 107666471 107666531 -58983765 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 1406 1152 211 219 11 chrX 107666569 107666934 -58983362 - RMER6C LTR ERVK 0 690 250 2 1406 370 195 30 36 chrX 107666949 107667162 -58983134 + (TATAA)n Simple_repeat Simple_repeat 1 211 0 2 1406 376 175 72 0 chrX 107667091 107667257 -58983039 + (TA)n Simple_repeat Simple_repeat 1 178 0 2 1406 1348 150 34 0 chrX 107667284 107667518 -58982778 - RMER6C LTR ERVK -448 242 1 2 1406 2979 276 28 26 chrX 107667618 107668437 -58981859 + ORR1D1-int LTR MaLR 550 1370 0 2 1406 1182 232 149 12 chrX 107668437 107668572 -58981724 + ORR1D1 LTR MaLR 1 171 -203 2 1406 333 102 0 0 chrX 107668572 107668631 -58981665 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 2 1406 1182 232 149 12 chrX 107668631 107668818 -58981478 + ORR1D1 LTR MaLR 172 366 -8 2 1406 295 240 28 19 chrX 107669265 107669371 -58980925 + Lx9 LINE L1 7516 7622 -22 2 1406 721 289 139 8 chrX 107669922 107670624 -58979672 + L1MA9 LINE L1 4308 5130 -1013 2 1406 663 302 5 23 chrX 107670624 107670844 -58979452 + B3 SINE B2 1 216 0 2 1406 243 0 0 0 chrX 107671064 107671091 -58979205 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1406 368 295 82 36 chrX 107671132 107671455 -58978841 + L1MA9 LINE L1 5377 5719 -572 2 1406 464 300 97 24 chrX 107672047 107672378 -58977918 + L1MA9 LINE L1 5958 6312 0 2 1406 207 100 0 0 chrX 107672567 107672597 -58977699 + (TC)n Simple_repeat Simple_repeat 2 31 0 2 1406 300 91 0 0 chrX 107673173 107673217 -58977079 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 1406 703 260 76 40 chrX 107673773 107673802 -58976494 + Lx9 LINE L1 6985 7012 -632 2 1406 1888 236 19 151 chrX 107673802 107674506 -58975790 - RMER19C LTR ERVK 0 611 1 2 1406 703 255 370 34 chrX 107674506 107674791 -58975505 + Lx9 LINE L1 7013 7396 -248 2 1406 279 281 0 0 chrX 107674811 107674893 -58975403 + Lx9 LINE L1 7554 7635 -9 2 1406 421 386 86 22 chrX 107675547 107675860 -58974436 + MLT2B1 LTR ERVL 188 520 0 2 1406 2613 153 29 25 chrX 107677390 107677871 -58972425 + Lx2 LINE L1 5869 6351 -646 2 1406 21 71 0 0 chrX 107678934 107678976 -58971320 + AT_rich Low_complexity Low_complexity 1 42 0 2 1406 266 0 0 29 chrX 107679135 107679170 -58971126 + (TAA)n Simple_repeat Simple_repeat 2 35 0 2 1406 229 359 28 28 chrX 107679175 107679284 -58971012 + MTEb LTR MaLR 9 117 -262 2 1406 356 301 31 16 chrX 107679331 107679475 -58970821 + MTEb LTR MaLR 204 349 -30 2 1406 6481 72 9 1 chrX 107679493 107680339 -58969957 - L1_Mus2 LINE L1 -1 6565 5713 2 1406 5786 151 23 4 chrX 107680362 107681320 -58968976 + Lx2 LINE L1 6022 6997 0 2 1406 373 333 86 6 chrX 107681368 107681543 -58968753 + MTE-int LTR MaLR 840 1028 -552 2 1406 3148 58 5 0 chrX 107681714 107682108 -58968188 + MTA_Mm LTR MaLR 1 396 0 2 1406 370 208 121 71 chrX 107682108 107682242 -58968054 - RMER1C Other Other -240 1102 962 2 1406 813 223 74 28 chrX 107682250 107682467 -58967829 + RMER1C Other Other 1116 1342 0 2 1406 332 278 110 53 chrX 107682562 107682790 -58967506 - L1MC4 LINE L1 -1558 6484 6244 2 1406 29 78 0 0 chrX 107682835 107682899 -58967397 + AT_rich Low_complexity Low_complexity 1 64 0 2 1406 733 221 34 34 chrX 107682945 107683123 -58967173 + RMER15 LTR ERVL 273 450 -125 2 1406 724 274 35 5 chrX 107683407 107683605 -58966691 + MTEb LTR MaLR 1 204 -175 2 1406 248 240 91 23 chrX 107683742 107683874 -58966422 + L1MA4 LINE L1 5788 5928 -372 2 1406 32 57 0 0 chrX 107684041 107684094 -58966202 + AT_rich Low_complexity Low_complexity 1 53 0 2 1406 36 23 0 0 chrX 107684136 107684179 -58966117 + AT_rich Low_complexity Low_complexity 1 43 0 2 1406 26 30 0 0 chrX 107684439 107684472 -58965824 + AT_rich Low_complexity Low_complexity 1 33 0 2 1406 4349 133 19 12 chrX 107684702 107685423 -58964873 + Lx2 LINE L1 6265 6990 -7 2 1406 880 132 75 0 chrX 107685696 107685855 -58964441 + ORR1C2 LTR MaLR 1 171 -213 2 1406 495 0 0 0 chrX 107685856 107685911 -58964385 + (TC)n Simple_repeat Simple_repeat 1 55 0 2 1406 1399 279 77 31 chrX 107685911 107686419 -58963877 - Lx9 LINE L1 -250 7394 6864 2 1406 2323 166 113 25 chrX 107686415 107686926 -58963370 - L1_Mur3 LINE L1 -1725 4155 3600 2 1406 279 229 27 54 chrX 107686928 107687002 -58963294 - MTD LTR MaLR -152 267 196 2 1406 944 108 0 7 chrX 107687007 107687156 -58963140 + (TTTC)n Simple_repeat Simple_repeat 1 148 0 2 1406 7014 133 28 12 chrX 107687174 107688345 -58961951 - Lx3A LINE L1 -9 6972 5783 2 1406 7335 66 2 57 chrX 107688345 107689428 -58960868 - L1Md_A LINE L1 -5 6577 5558 2 1406 769 202 86 6 chrX 107689428 107689602 -58960694 - MTD LTR MaLR -208 211 24 2 1406 315 264 152 89 chrX 107689664 107689822 -58960474 + MTEb LTR MaLR 203 370 -9 2 1406 4816 76 12 103 chrX 107689942 107690511 -58959785 + L1_Mus2 LINE L1 5849 6351 -215 2 1406 942 131 14 0 chrX 107690511 107690656 -58959640 - B1_Mm SINE Alu 0 147 1 2 1406 4816 76 12 103 chrX 107690656 107690860 -58959436 + L1_Mus2 LINE L1 6352 6551 -15 2 1406 3506 202 48 28 chrX 107691006 107691729 -58958567 + Lx5 LINE L1 6310 7047 -3 2 1406 347 360 33 50 chrX 107691937 107692057 -58958239 - RSINE1 SINE B4 -33 132 15 2 1406 265 260 171 48 chrX 107693182 107693287 -58957009 - MLT1F-int LTR MaLR 0 1489 1372 2 1406 291 413 9 9 chrX 107693328 107693438 -58956858 + LTR16B LTR ERVL 7 116 -347 2 1406 21 71 0 0 chrX 107693520 107693562 -58956734 + AT_rich Low_complexity Low_complexity 1 42 0 2 1406 204 172 0 0 chrX 107694290 107694348 -58955948 + A-rich Low_complexity Low_complexity 1 58 0 2 1406 842 197 166 0 chrX 107695115 107695308 -58954988 + URR1B DNA MER1_type 1 225 0 2 1406 1683 159 7 0 chrX 107695615 107695910 -58954386 - Lx2A1 LINE L1 0 7008 6712 2 1406 242 404 48 62 chrX 107696128 107696225 -58954071 + MLT1K LTR MaLR 1 99 -496 2 1406 2014 179 20 20 chrX 107696225 107696619 -58953677 - ORR1B1 LTR MaLR 0 394 1 2 1406 242 404 48 62 chrX 107696619 107696666 -58953630 + MLT1K LTR MaLR 100 143 -452 2 1406 2376 64 0 13 chrX 107696831 107697149 -58953147 + L1Md_F2 LINE L1 6252 6565 -17 2 1406 379 313 83 29 chrX 107697824 107698028 -58952268 - Lx6 LINE L1 -9 7451 7237 2 1406 224 167 24 0 chrX 107698077 107698119 -58952177 - B1_Mus2 SINE Alu -5 142 100 2 1406 8499 24 0 0 chrX 107698881 107700549 -58949747 - L1Md_T LINE L1 0 6582 4915 2 1406 2452 109 43 8 chrX 107700549 107700946 -58949350 - IAPLTR2a LTR ERVK 0 411 1 2 1406 6936 35 4 11 chrX 107700947 107701783 -58948513 - IAPEz-int LTR ERVK -1 6480 5651 2 1406 2531 88 0 6 chrX 107701776 107702120 -58948176 - IAPEz-int LTR ERVK -4781 1700 1359 2 1406 3485 58 0 20 chrX 107702120 107702577 -58947719 - IAPEz-int LTR ERVK -5819 662 215 2 1406 1139 78 7 0 chrX 107702545 107702698 -58947598 - IAPEz-int LTR ERVK -6160 321 168 2 1406 244 302 0 0 chrX 107702698 107702751 -58947545 - RLTR27 LTR ERVK -34 275 223 2 1406 978 115 25 85 chrX 107702751 107702950 -58947346 - IAPEz-int LTR ERVK -6286 195 9 2 1406 2382 118 43 8 chrX 107702951 107703345 -58946951 - IAPLTR2a LTR ERVK 0 411 4 2 1406 29517 48 0 4 chrX 107703349 107707914 -58942382 - L1Md_Gf LINE L1 -963 4923 278 2 1406 300 91 0 0 chrX 107707941 107707985 -58942311 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1406 645 298 104 16 chrX 107707986 107708293 -58942003 - Lx9 LINE L1 -189 7455 7122 2 1406 1839 130 12 76 chrX 107708304 107708645 -58941651 - ORR1A4 LTR MaLR -8 321 3 2 1406 669 318 4 40 chrX 107708650 107708928 -58941368 - Lx9 LINE L1 -528 7116 6849 2 1406 30 0 0 0 chrX 107709206 107709236 -58941060 + AT_rich Low_complexity Low_complexity 1 30 0 2 1406 4362 14 2 2 chrX 107710040 107710533 -58939763 - MT2_Mm LTR ERVL 0 493 1 2 1406 314 0 0 0 chrX 107710533 107710571 -58939725 - MERVL-int LTR ERVL 0 5485 5448 2 1406 375 179 46 35 chrX 107710571 107710658 -58939638 - ORR1A3-int LTR MaLR -1323 640 553 2 1406 40456 16 14 0 chrX 107710658 107715945 -58934351 - MERVL-int LTR ERVL -125 5360 1 2 1406 4410 12 2 0 chrX 107715945 107716437 -58933859 - MT2_Mm LTR ERVL 0 493 1 2 1406 274 360 0 0 chrX 107716736 107716811 -58933485 + ID4_ SINE ID 9 83 0 2 1406 22 0 0 0 chrX 107717297 107717319 -58932977 + AT_rich Low_complexity Low_complexity 1 22 0 2 1406 21 36 0 0 chrX 107717343 107717371 -58932925 + AT_rich Low_complexity Low_complexity 1 28 0 2 1406 672 158 65 21 chrX 107717845 107718025 -58932271 + URR1B DNA MER1_type 1 216 -9 2 1406 2025 17 0 4 chrX 107718157 107718390 -58931906 + L1Md_T LINE L1 5355 5586 -297 3 1406 8437 29 0 18 chrX 107718390 107719418 -58930878 + L1Md_T LINE L1 5587 6582 0 3 1406 1116 325 32 34 chrX 107719758 107720232 -58930064 + Lx7 LINE L1 6425 6897 -799 3 1406 356 301 73 8 chrX 107720361 107720485 -58929811 + Lx8 LINE L1 7107 7238 -235 3 1406 4357 220 56 24 chrX 107720491 107721788 -58928508 - Lx2B LINE L1 0 7009 5587 3 1406 2841 156 2 29 chrX 107721787 107722307 -58927989 + Lx2B LINE L1 5072 5577 -300 3 1406 539 205 23 90 chrX 107722308 107722485 -58927811 - Lx2B LINE L1 -3 6997 6833 3 1406 276 83 49 16 chrX 107722562 107722623 -58927673 + (TTTTG)n Simple_repeat Simple_repeat 2 64 0 3 1406 321 26 0 0 chrX 107722627 107722665 -58927631 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 3 1406 21 71 0 0 chrX 107723310 107723352 -58926944 + AT_rich Low_complexity Low_complexity 1 42 0 3 1406 1134 63 7 0 chrX 107723487 107723630 -58926666 - B1_Mus1 SINE Alu 0 148 5 3 1406 345 310 69 13 chrX 107723633 107723865 -58926431 + L1M4 LINE L1 4553 4797 -1349 3 1406 314 263 112 8 chrX 107723979 107724113 -58926183 + L1M4 LINE L1 4845 4992 -1154 3 1406 371 21 21 0 chrX 107724619 107724667 -58925629 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1406 462 114 34 0 chrX 107724672 107724760 -58925536 + (GA)n Simple_repeat Simple_repeat 1 91 0 3 1406 1645 244 3 6 chrX 107724923 107725278 -58925018 - Lx9 LINE L1 -766 6878 6525 3 1406 27 29 0 0 chrX 107725350 107725384 -58924912 + AT_rich Low_complexity Low_complexity 1 34 0 3 1406 7340 123 14 21 chrX 107725749 107726912 -58923384 + Lx3A LINE L1 5827 6981 0 3 1406 26 50 0 0 chrX 107726912 107726952 -58923344 + AT_rich Low_complexity Low_complexity 1 40 0 3 1406 490 368 20 36 chrX 107727070 107727318 -58922978 + MLT1E3 LTR MaLR 362 605 -19 3 1406 203 333 61 30 chrX 107728253 107728352 -58921944 + L4 LINE RTE 1648 1749 -280 3 1406 253 287 59 35 chrX 107728854 107729024 -58921272 + Lx8 LINE L1 5752 5925 -1548 3 1406 738 95 0 0 chrX 107729065 107729191 -58921105 + (GA)n Simple_repeat Simple_repeat 2 127 0 3 1406 18951 82 5 12 chrX 107729352 107732016 -58918280 + L1Md_F2 LINE L1 2943 5586 -297 3 1406 7735 62 1 4 chrX 107732017 107733003 -58917293 + L1Md_F2 LINE L1 5588 6570 -12 3 1406 249 316 10 59 chrX 107733303 107733404 -58916892 - RMER4B LTR ERVK -460 125 30 3 1406 248 0 31 0 chrX 107733404 107733436 -58916860 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 3 1406 1377 148 59 0 chrX 107733443 107733699 -58916597 + BGLII_Mus LTR ERVK 1 271 -151 3 1406 24 0 0 0 chrX 107734259 107734283 -58916013 + AT_rich Low_complexity Low_complexity 1 24 0 3 1406 195 42 0 0 chrX 107734551 107734575 -58915721 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1406 1509 152 144 7 chrX 107734946 107735245 -58915051 - RMER6A LTR ERVK -4 752 413 3 1406 373 131 0 23 chrX 107736195 107736281 -58914015 + (TA)n Simple_repeat Simple_repeat 2 85 0 3 1406 28 0 0 0 chrX 107736370 107736398 -58913898 + AT_rich Low_complexity Low_complexity 1 28 0 3 1406 254 245 0 0 chrX 107736443 107736515 -58913781 + polypyrimidine Low_complexity Low_complexity 1 72 0 3 1406 2162 283 33 22 chrX 107736630 107737269 -58913027 - Lx7 LINE L1 -363 7333 6688 3 1406 453 81 0 0 chrX 107737446 107737508 -58912788 + (TCC)n Simple_repeat Simple_repeat 2 63 0 3 1406 561 55 0 0 chrX 107737508 107737581 -58912715 + (TC)n Simple_repeat Simple_repeat 1 73 0 3 1406 3973 125 25 64 chrX 107737739 107738516 -58911780 - RMER17A LTR ERVK -5 746 1 3 1406 528 297 0 33 chrX 107738532 107738682 -58911614 - Lx7 LINE L1 -999 6697 6553 3 1406 1660 212 63 10 chrX 107738677 107739087 -58911209 + L1_Mur3 LINE L1 4331 4762 -1118 3 1406 1975 298 22 16 chrX 107739089 107739859 -58910437 - L1_Mur3 LINE L1 -3227 2653 1879 3 1406 573 296 52 42 chrX 107740016 107740228 -58910068 - B3 SINE B2 -1 215 2 3 1406 406 372 64 86 chrX 107740437 107740796 -58909500 - MLT1A0 LTR MaLR 0 365 15 3 1406 309 51 0 0 chrX 107741051 107741090 -58909206 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1407 200 213 0 47 chrX 107741571 107741635 -58908661 + T-rich Low_complexity Low_complexity 5 65 0 3 1407 194 211 55 55 chrX 107741951 107742006 -58908290 + L3 LINE CR1 931 985 -3504 3 1407 2481 134 14 30 chrX 107742166 107742596 -58907700 + Lx LINE L1 6231 6653 -1 3 1407 1372 242 101 20 chrX 107743059 107743405 -58906891 + ORR1D1 LTR MaLR 1 374 0 3 1407 439 246 149 0 chrX 107743405 107743519 -58906777 + ORR1D1-int LTR MaLR 1 131 -1239 3 1407 1184 201 32 86 chrX 107743519 107743834 -58906462 + ORR1D1-int LTR MaLR 241 538 -832 3 1407 2110 269 56 19 chrX 107743832 107744401 -58905895 + ORR1D1-int LTR MaLR 672 1261 -109 3 1407 2075 148 8 38 chrX 107744402 107744667 -58905629 + L1_Mm LINE L1 5271 5526 -357 3 1407 4244 66 0 7 chrX 107744667 107745219 -58905077 - L1Md_F2 LINE L1 -14 6568 6021 3 1407 2075 148 8 38 chrX 107745219 107745325 -58904971 + L1_Mm LINE L1 5527 5631 -252 3 1407 2206 147 8 8 chrX 107745321 107745706 -58904590 - L1_Mur2 LINE L1 -1141 4736 4352 3 1407 225 400 0 0 chrX 107746037 107746112 -58904184 + ID4_ SINE ID 6 80 -3 3 1407 332 339 85 11 chrX 107746206 107746382 -58903914 + MARNA DNA Mariner 322 510 -76 3 1407 3070 134 55 6 chrX 107746614 107747140 -58903156 + Lx4B LINE L1 5755 6306 -752 3 1407 3600 170 18 10 chrX 107747159 107747782 -58902514 + Lx4B LINE L1 6419 7046 -12 3 1407 688 344 11 44 chrX 107747863 107748134 -58902162 + ORR1D1 LTR MaLR 98 359 0 3 1407 24 32 0 0 chrX 107748145 107748176 -58902120 + AT_rich Low_complexity Low_complexity 1 31 0 3 1407 535 311 70 16 chrX 107748242 107748500 -58901796 + L1M2 LINE L1 4721 4992 -1151 3 1407 317 256 0 25 chrX 107748506 107748586 -58901710 + BC1_Mm scRNA scRNA 9 86 -66 3 1407 759 298 68 17 chrX 107748591 107749328 -58900968 + L1M2 LINE L1 4990 5777 -523 3 1407 490 340 87 11 chrX 107749329 107749594 -58900702 + Lx8 LINE L1 7151 7435 -38 3 1407 2085 184 17 3 chrX 107749604 107749958 -58900338 - ORR1B2 LTR MaLR -8 359 1 3 1407 886 325 49 36 chrX 107749967 107750579 -58899717 + L1MA7 LINE L1 5671 6290 -1 3 1407 1159 177 121 0 chrX 107751804 107752019 -58898277 - MTC LTR MaLR 0 421 181 3 1407 665 295 95 25 chrX 107752026 107752311 -58897985 - Lx6 LINE L1 -1258 6202 5898 3 1407 3159 52 10 2 chrX 107752418 107752823 -58897473 + L1Md_F3 LINE L1 6163 6570 -14 3 1407 1136 291 124 28 chrX 107752860 107753417 -58896879 + Lx6 LINE L1 6460 7431 -29 3 1407 802 251 78 0 chrX 107753429 107753608 -58896688 - MTC LTR MaLR -228 193 1 3 1407 16006 194 37 69 chrX 107754557 107758611 -58891685 + Lx5 LINE L1 640 4617 -1263 3 1407 4519 162 34 8 chrX 107758611 107759400 -58890896 + Lx4A LINE L1 6249 7058 0 3 1407 16006 203 22 65 chrX 107759400 107760226 -58890070 + Lx5 LINE L1 4618 5345 -535 3 1407 1749 167 12 28 chrX 107760236 107760699 -58889597 + RMER6D LTR ERVK 14 683 -7 3 1407 353 205 60 0 chrX 107760700 107760783 -58889513 + Lx5 LINE L1 5331 5418 -462 3 1407 297 0 0 0 chrX 107760783 107760816 -58889480 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 3 1407 647 80 34 42 chrX 107760819 107760937 -58889359 - L1_Mus1 LINE L1 -1 6566 6450 3 1407 1080 70 21 0 chrX 107760941 107761083 -58889213 + B1_Mus2 SINE Alu 1 145 -2 3 1407 610 161 285 0 chrX 107761094 107761224 -58889072 + L1Md_F2 LINE L1 5420 5586 -297 3 1407 8280 39 1 0 chrX 107761225 107762216 -58888080 + L1Md_F2 LINE L1 5588 6579 -3 3 1407 491 82 14 0 chrX 107762267 107762340 -58887956 + (TAA)n Simple_repeat Simple_repeat 2 75 0 3 1407 4154 152 138 12 chrX 107762343 107762586 -58887710 + Lx5 LINE L1 5510 5783 -1267 3 1407 291 28 0 0 chrX 107762586 107762622 -58887674 + (TC)n Simple_repeat Simple_repeat 2 37 0 3 1407 327 78 0 0 chrX 107762622 107762672 -58887624 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 1407 441 0 0 0 chrX 107762672 107762720 -58887576 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1407 4154 259 65 87 chrX 107762720 107764011 -58886285 + Lx5 LINE L1 5784 7026 -24 3 1407 216 0 0 0 chrX 107764342 107764366 -58885930 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1407 947 97 7 0 chrX 107764931 107765076 -58885220 + (TTTTC)n Simple_repeat Simple_repeat 2 147 0 3 1407 1123 78 0 0 chrX 107765078 107765219 -58885077 - B1_Mm SINE Alu -6 141 1 3 1407 282 293 64 16 chrX 107765366 107765491 -58884805 - RMER15 LTR ERVL -98 477 347 3 1407 1575 309 36 11 chrX 107765688 107766209 -58884087 - Lx6 LINE L1 -725 6735 6202 3 1407 2775 267 53 4 chrX 107766210 107766905 -58883391 + Lx6 LINE L1 6726 7454 -6 3 1407 318 133 0 0 chrX 107767703 107767748 -58882548 + BGLII_Mus LTR ERVK 40 84 -338 3 1407 8532 157 24 6 chrX 107767750 107770095 -58880201 + Lx LINE L1 4262 6649 -5 3 1407 4687 91 3 23 chrX 107770487 107771183 -58879113 - L1_Mus3 LINE L1 -3 6635 5954 3 1407 494 96 21 0 chrX 107771351 107771445 -58878851 + (CAGA)n Simple_repeat Simple_repeat 1 96 0 3 1407 3295 85 0 32 chrX 107772384 107772446 -58877850 - L1_Mus1 LINE L1 -1 6566 6517 3 1407 3655 37 0 0 chrX 107772446 107772880 -58877416 - L1Md_F3 LINE L1 -15 6569 6136 3 1407 3295 85 0 32 chrX 107772880 107773290 -58877006 - L1_Mus1 LINE L1 -51 6516 6109 3 1407 244 359 65 0 chrX 107773578 107773637 -58876659 + MT2B2 LTR ERVL 195 259 -325 3 1407 337 377 0 26 chrX 107773637 107773754 -58876542 + PB1D10 SINE Alu 3 116 -1 3 1407 216 0 0 0 chrX 107773903 107773927 -58876369 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1407 3783 153 104 6 chrX 107774081 107774751 -58875545 - RMER19A LTR ERVK 0 737 2 3 1407 24 0 0 0 chrX 107774839 107774863 -58875433 + AT_rich Low_complexity Low_complexity 1 24 0 3 1407 22 0 0 0 chrX 107775234 107775256 -58875040 + AT_rich Low_complexity Low_complexity 1 22 0 3 1407 611 316 124 23 chrX 107776066 107776982 -58873314 + L1M2 LINE L1 4340 5388 -755 3 1407 427 304 32 40 chrX 107776953 107776998 -58873298 + L1P5 LINE L1 5363 5405 -751 3 1407 1726 219 21 8 chrX 107776998 107777370 -58872926 - ORR1C1 LTR MaLR -1 377 1 3 1407 427 304 32 40 chrX 107777370 107777574 -58872722 + L1P5 LINE L1 5406 5610 -546 3 1407 265 271 36 27 chrX 107777691 107777801 -58872495 + L1M2 LINE L1 5763 5873 -427 3 1407 187 358 10 21 chrX 107777866 107777963 -58872333 + MIRb SINE MIR 104 199 -69 3 1407 5643 111 7 6 chrX 107778105 107778932 -58871364 - Lx LINE L1 -3 6651 5824 3 1407 45 87 0 0 chrX 107779197 107779312 -58870984 + AT_rich Low_complexity Low_complexity 1 115 0 3 1407 306 0 0 0 chrX 107779561 107779595 -58870701 + (TAA)n Simple_repeat Simple_repeat 2 35 0 3 1407 342 0 0 0 chrX 107780830 107780868 -58869428 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 3 1407 278 368 58 54 chrX 107780994 107781235 -58869061 - MLT1E2 LTR MaLR -29 598 357 3 1407 264 325 96 18 chrX 107781714 107781880 -58868416 + Tigger1 DNA MER2_type 1076 1254 -1164 3 1407 714 123 0 0 chrX 107781883 107781989 -58868307 + B2_Mm2 SINE B2 2 107 -88 3 1407 780 294 159 18 chrX 107782326 107782828 -58867468 + Tigger1 DNA MER2_type 1750 2322 -96 3 1407 323 347 27 14 chrX 107782911 107783057 -58867239 - RSINE1 SINE B4 -17 148 1 3 1407 292 290 124 23 chrX 107783218 107783613 -58866683 - L1M4 LINE L1 -1397 4743 4309 3 1407 497 316 54 52 chrX 107783913 107784374 -58865922 + L1MA9 LINE L1 5634 6095 -217 4 1407 342 276 83 32 chrX 107784543 107784700 -58865596 - L1M4 LINE L1 -3589 2557 2393 3 1407 2683 273 90 37 chrX 107784773 107786296 -58864000 - Lx9 LINE L1 -543 7101 5467 4 1407 2569 207 26 13 chrX 107786289 107786972 -58863324 + L1_Rod LINE L1 1125 1825 -4022 4 1407 3611 152 8 7 chrX 107786972 107787621 -58862675 + Lx3_Mus LINE L1 5276 5929 -1080 4 1407 26 64 0 0 chrX 107787661 107787708 -58862588 + AT_rich Low_complexity Low_complexity 1 47 0 4 1407 1292 231 105 54 chrX 107787711 107788252 -58862044 + L1_Rod LINE L1 3166 3734 -2113 4 1407 3482 205 71 36 chrX 107788253 107789010 -58861286 + Lx9 LINE L1 6694 7488 -156 4 1407 1217 99 16 22 chrX 107789010 107789195 -58861101 + B2_Mm2 SINE B2 4 187 -8 4 1407 3482 205 71 36 chrX 107789195 107789349 -58860947 + Lx9 LINE L1 7489 7637 -7 4 1407 249 171 42 8 chrX 107789360 107789478 -58860818 + (TA)n Simple_repeat Simple_repeat 1 122 0 4 1407 198 159 63 0 chrX 107789514 107789577 -58860719 + (CATATA)n Simple_repeat Simple_repeat 4 70 0 4 1407 1141 332 40 20 chrX 107789667 107790069 -58860227 + MTE-int LTR MaLR 830 1239 -341 4 1407 3444 127 0 11 chrX 107790520 107791071 -58859225 + L1_Mus1 LINE L1 1684 2228 -3655 4 1407 16684 109 7 4 chrX 107791067 107792657 -58857639 + L1_Mus1 LINE L1 3397 4984 -899 4 1407 723 54 0 0 chrX 107792657 107792749 -58857547 + (GAAAA)n Simple_repeat Simple_repeat 3 94 0 4 1407 16684 93 12 1 chrX 107792749 107794310 -58855986 + L1_Mus1 LINE L1 4985 6652 -2 4 1407 231 103 0 0 chrX 107794311 107794350 -58855946 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1407 1126 57 7 0 chrX 107794358 107794498 -58855798 + B1_Mus1 SINE Alu 1 141 -7 4 1407 223 258 0 0 chrX 107794502 107794568 -58855728 + A-rich Low_complexity Low_complexity 1 66 0 4 1407 1430 67 0 0 chrX 107794582 107794761 -58855535 - L1_Mm LINE L1 -141 5742 5564 4 1407 4332 50 13 11 chrX 107794761 107795310 -58854986 + L1Md_F2 LINE L1 6033 6582 0 4 1407 12590 90 9 3 chrX 107795311 107797894 -58852402 + L1_Mus2 LINE L1 3970 6565 -1 4 1407 1593 319 29 52 chrX 107798950 107799665 -58850631 + Lx8 LINE L1 6139 6837 -636 4 1407 387 0 0 0 chrX 107801425 107801468 -58848828 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 4 1407 7289 79 12 29 chrX 107802515 107803869 -58846427 - L1_Mus2 LINE L1 0 6566 5228 4 1407 737 304 30 21 chrX 107804829 107805064 -58845232 - ORR1D2-int LTR MaLR -1227 353 117 4 1407 8022 139 23 2 chrX 107805102 107807257 -58843039 - Lx LINE L1 -8 6646 4445 4 1407 37430 43 2 3 chrX 107807297 107813598 -58836698 - L1Md_T LINE L1 -2 6583 192 4 1407 2808 151 77 8 chrX 107813592 107814112 -58836184 - L1_Mur2 LINE L1 -1422 4455 3900 4 1407 264 267 13 26 chrX 107814117 107814194 -58836102 - ORR1D2-int LTR MaLR -1289 81 6 4 1407 788 338 56 4 chrX 107814208 107814478 -58835818 - ORR1D2 LTR MaLR -7 363 80 4 1407 189 0 0 0 chrX 107814491 107814512 -58835784 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1407 347 289 21 62 chrX 107814588 107814632 -58835664 + Lx8 LINE L1 2073 2118 -3762 4 1407 4451 10 0 0 chrX 107814632 107815125 -58835171 - MT2_Mm LTR ERVL 0 493 1 4 1407 347 289 21 62 chrX 107815125 107815272 -58835024 + Lx8 LINE L1 2119 2256 -3624 4 1407 1091 277 107 24 chrX 107815290 107815664 -58834632 - MTD LTR MaLR -14 405 1 4 1407 1529 296 61 124 chrX 107815664 107815740 -58834556 - MTD-int LTR MaLR 0 1098 1023 4 1407 1815 44 0 30 chrX 107815740 107815973 -58834323 + L1Md_F3 LINE L1 6345 6570 -14 4 1407 1860 276 52 107 chrX 107815973 107816806 -58833490 - MTD-int LTR MaLR -76 1022 255 4 1407 302 0 26 0 chrX 107816806 107816844 -58833452 + (TC)n Simple_repeat Simple_repeat 2 40 0 4 1407 6380 128 27 7 chrX 107816844 107817882 -58832414 - Lx2 LINE L1 -6 6991 5933 4 1407 1860 254 43 89 chrX 107817882 107818124 -58832172 - MTD-int LTR MaLR -1001 257 21 4 1407 183 156 0 0 chrX 107818129 107818161 -58832135 + T-rich Low_complexity Low_complexity 1 32 0 4 1407 1340 118 0 0 chrX 107818174 107818360 -58831936 - U2 snRNA snRNA -1 187 2 4 1407 1248 256 67 44 chrX 107818362 107818722 -58831574 - MTD LTR MaLR -21 398 31 4 1407 447 303 35 71 chrX 107818759 107819125 -58831171 + Lx8 LINE L1 2272 2624 -3256 4 1407 551 282 81 14 chrX 107819132 107819355 -58830941 - Lx7 LINE L1 -729 6967 6730 4 1407 22 35 0 0 chrX 107819389 107819418 -58830878 + AT_rich Low_complexity Low_complexity 1 29 0 4 1407 903 263 117 120 chrX 107819433 107820240 -58830056 + Lx8 LINE L1 2679 3482 -2398 4 1407 1784 195 197 29 chrX 107820292 107820715 -58829581 + RMER6C LTR ERVK 1 510 -180 4 1407 3338 123 25 34 chrX 107820715 107821271 -58829025 + Lx LINE L1 6104 6654 0 4 1407 1784 182 208 51 chrX 107821271 107821570 -58828726 + RMER6C LTR ERVK 483 693 -63 4 1407 264 59 0 0 chrX 107821570 107821604 -58828692 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 4 1407 556 153 237 71 chrX 107821604 107821638 -58828658 + RMER6C LTR ERVK 682 715 -5 4 1407 236 246 101 0 chrX 107821648 107821717 -58828579 + L1M3 LINE L1 4369 4444 -1696 4 1407 429 258 99 8 chrX 107821749 107821870 -58828426 + B1_Mur2 SINE Alu 1 132 -17 4 1407 210 71 0 0 chrX 107821874 107821902 -58828394 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 4 1407 3135 280 60 78 chrX 107821924 107822746 -58827550 + Lx8 LINE L1 4422 5193 -687 4 1407 393 22 0 0 chrX 107822746 107822792 -58827504 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1407 3135 290 63 67 chrX 107822792 107823785 -58826511 + Lx8 LINE L1 5194 6212 -1484 4 1407 9250 157 82 18 chrX 107823788 107825645 -58824651 + ORR1A2-int LTR MaLR 1 1963 0 4 1407 1868 125 7 26 chrX 107825645 107825933 -58824363 + ORR1A2 LTR MaLR 38 319 -8 4 1407 823 295 8 12 chrX 107825938 107826182 -58824114 + Lx8 LINE L1 6214 6456 -1017 4 1407 477 0 0 0 chrX 107826203 107826256 -58824040 + (TTA)n Simple_repeat Simple_repeat 3 55 0 4 1407 1498 323 86 43 chrX 107826256 107826421 -58823875 + Lx8 LINE L1 6623 6794 -679 4 1407 648 224 112 20 chrX 107826421 107826617 -58823679 - B3 SINE B2 0 216 3 4 1407 1498 323 86 43 chrX 107826617 107827246 -58823050 + Lx8 LINE L1 6795 7451 -22 4 1407 1113 99 0 0 chrX 107827688 107827849 -58822447 + (GGAGA)n Simple_repeat Simple_repeat 5 165 0 4 1407 844 121 28 23 chrX 107827924 107828101 -58822195 + GA-rich Low_complexity Low_complexity 3 180 0 4 1407 255 61 0 0 chrX 107828169 107828202 -58822094 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 4 1407 696 275 15 89 chrX 107828245 107828516 -58821780 + RMER15 LTR ERVL 323 573 -2 4 1407 261 273 0 0 chrX 107829202 107829294 -58821002 + (TA)n Simple_repeat Simple_repeat 1 92 0 4 1407 244 115 0 0 chrX 107829332 107829384 -58820912 + L1Md_T LINE L1 6531 6582 0 4 1407 2460 118 8 0 chrX 107829940 107830304 -58819992 - Lx2A LINE L1 -5 7003 6637 4 1407 241 257 53 26 chrX 107831018 107831094 -58819202 + MIRc SINE MIR 11 88 -180 4 1407 431 404 23 9 chrX 107831271 107831491 -58818805 + B4A SINE B4 66 288 -4 4 1407 1062 222 43 5 chrX 107832559 107832767 -58817529 + B3 SINE B2 1 216 0 4 1407 975 293 18 38 chrX 107833566 107834069 -58816227 - L1MA7 LINE L1 -22 6269 5777 4 1407 285 319 116 12 chrX 107834065 107834316 -58815980 + L1MA7 LINE L1 5433 5709 -480 4 1407 811 202 6 0 chrX 107836247 107836420 -58813876 + L1_Mur2 LINE L1 3565 3738 -2139 4 1407 9257 98 6 19 chrX 107836417 107837839 -58812457 - MusHAL1 LINE L1 -998 1714 311 4 1407 11063 171 122 21 chrX 107837835 107839965 -58810331 + Lx LINE L1 3256 5632 -251 4 1407 3546 13 0 0 chrX 107839965 107840361 -58809935 + MTA_Mm LTR MaLR 1 396 0 4 1407 11063 140 28 23 chrX 107840361 107841370 -58808926 + Lx LINE L1 5633 6648 -6 4 1407 249 295 32 0 chrX 107841516 107841611 -58808685 - L1MC4 LINE L1 -408 7634 7537 4 1407 1099 292 42 42 chrX 107841817 107842200 -58808096 - Lx9 LINE L1 -452 7192 6810 4 1407 381 291 13 19 chrX 107842214 107842368 -58807928 + Lx9 LINE L1 7225 7377 -267 4 1407 22 0 0 0 chrX 107842572 107842594 -58807702 + AT_rich Low_complexity Low_complexity 1 22 0 4 1407 31659 127 12 19 chrX 107842673 107844247 -58806049 + L1Md_F2 LINE L1 415 1970 -3913 4 1407 320 0 25 0 chrX 107844247 107844287 -58806009 + (CAA)n Simple_repeat Simple_repeat 2 42 0 4 1407 31659 79 7 1 chrX 107844287 107847874 -58802422 + L1Md_F2 LINE L1 1971 5584 -299 4 1407 7650 68 1 5 chrX 107847875 107848875 -58801421 + L1Md_F2 LINE L1 5587 6582 0 4 1407 334 287 98 15 chrX 107848906 107849111 -58801185 - L1MC4 LINE L1 -811 7231 7010 4 1407 207 0 0 0 chrX 107849129 107849152 -58801144 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 4 1407 21 0 0 0 chrX 107849201 107849222 -58801074 + AT_rich Low_complexity Low_complexity 1 21 0 4 1407 27 49 0 0 chrX 107849463 107849504 -58800792 + AT_rich Low_complexity Low_complexity 1 41 0 4 1407 197 24 70 23 chrX 107851152 107851195 -58799101 + (TTG)n Simple_repeat Simple_repeat 2 46 0 4 1407 32 26 0 0 chrX 107851943 107851982 -58798314 + AT_rich Low_complexity Low_complexity 1 39 0 4 1407 189 244 85 0 chrX 107852054 107852136 -58798160 - MIR SINE MIR -55 207 119 4 1407 369 36 0 0 chrX 107852189 107852244 -58798052 - L1_Mus3 LINE L1 -6 6632 6578 4 1407 280 56 0 0 chrX 107852460 107852496 -58797800 + RMER6D LTR ERVK 1 36 -684 4 1407 3361 174 20 40 chrX 107852521 107853163 -58797133 - L1_Mur2 LINE L1 -5970 742 114 4 1407 1030 294 25 64 chrX 107853182 107853509 -58796787 + MTE2a LTR MaLR 57 370 -9 4 1407 1410 142 9 4 chrX 107853632 107853858 -58796438 + L1VL1 LINE L1 40 266 -6156 4 1407 676 200 0 0 chrX 107853858 107853988 -58796308 + L1Md_F LINE L1 383 512 -6007 4 1407 748 232 6 29 chrX 107853991 107854164 -58796132 + ORR1B2-int LTR MaLR 14 182 -1327 4 1407 3815 168 35 32 chrX 107854134 107854846 -58795450 + ORR1B2-int LTR MaLR 796 1509 0 4 1407 1862 151 86 6 chrX 107854846 107855173 -58795123 + ORR1B2 LTR MaLR 1 353 -14 4 1407 962 164 38 0 chrX 107855173 107855356 -58794940 + L1_Mus3 LINE L1 6442 6631 -7 4 1407 313 307 75 56 chrX 107855640 107855747 -58794549 + RSINE1 SINE B4 57 165 0 4 1407 622 273 142 0 chrX 107855974 107856157 -58794139 + B3 SINE B2 3 211 -5 4 1407 432 55 0 0 chrX 107856165 107856220 -58794076 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 1407 1608 152 86 3 chrX 107856364 107856668 -58793628 + Lx2 LINE L1 6668 6996 -1 4 1407 250 367 54 7 chrX 107857914 107858062 -58792234 - L2a LINE L2 -2 3424 3270 4 1407 583 136 7 54 chrX 107858210 107858266 -58792030 + polypurine Low_complexity Low_complexity 3 58 0 4 1407 1191 58 23 11 chrX 107858266 107858442 -58791854 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 4 1407 583 136 7 54 chrX 107858442 107858533 -58791763 + polypurine Low_complexity Low_complexity 59 142 0 4 1407 744 126 0 0 chrX 107858507 107858626 -58791670 + (GAAA)n Simple_repeat Simple_repeat 1 119 0 4 1407 251 284 147 60 chrX 107858967 107859083 -58791213 - MLT1A1 LTR MaLR -1 407 282 4 1407 516 32 0 0 chrX 107859142 107859204 -58791092 + (TC)n Simple_repeat Simple_repeat 1 62 0 4 1407 21 36 0 0 chrX 107859450 107859478 -58790818 + AT_rich Low_complexity Low_complexity 1 28 0 4 1407 7889 92 24 19 chrX 107859478 107860574 -58789722 - Lx3_Mus LINE L1 0 7009 5907 4 1407 486 0 0 0 chrX 107860574 107860628 -58789668 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 4 1407 7889 92 24 19 chrX 107860628 107860719 -58789577 - Lx3_Mus LINE L1 -1103 5906 5817 4 1407 858 218 41 88 chrX 107860727 107860902 -58789394 - Lx9 LINE L1 -1 7643 7490 4 1407 279 0 0 0 chrX 107860902 107860933 -58789363 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1407 858 218 41 88 chrX 107860933 107861119 -58789177 - Lx9 LINE L1 -155 7489 7300 4 1407 358 322 171 68 chrX 107861127 107861390 -58788906 - ORR1E LTR MaLR -69 290 1 4 1407 289 310 28 0 chrX 107861427 107861498 -58788798 - ORR1E LTR MaLR -286 73 1 4 1407 246 281 19 144 chrX 107861506 107861714 -58788582 - L1MA7 LINE L1 -199 6092 5911 5 1407 226 345 56 15 chrX 107861937 107862075 -58788221 + MIR3 SINE MIR 52 193 -15 5 1407 1180 208 42 60 chrX 107862215 107862547 -58787749 + MamRep434 DNA TcMar 98 423 -3 5 1407 910 36 0 0 chrX 107863172 107863283 -58787013 - L1Md_F2 LINE L1 -240 6342 6232 5 1407 235 306 103 43 chrX 107863284 107863400 -58786896 - MIRc SINE MIR -63 205 83 5 1407 261 0 0 0 chrX 107863806 107863835 -58786461 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 5 1407 1301 268 83 28 chrX 107863849 107863987 -58786309 + MTD LTR MaLR 3 156 -263 5 1407 2023 130 7 0 chrX 107863987 107864294 -58786002 - RLTR27 LTR ERVK 0 309 1 5 1407 1301 268 83 28 chrX 107864294 107864550 -58785746 + MTD LTR MaLR 157 418 -1 5 1407 221 190 0 23 chrX 107865405 107865448 -58784848 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 5 1407 360 285 135 55 chrX 107865645 107866135 -58784161 - L1M5 LINE L1 -2143 4003 3475 5 1407 635 282 6 71 chrX 107866140 107866308 -58783988 + B3A SINE B2 3 159 -39 5 1407 344 348 52 0 chrX 107866350 107866485 -58783811 - B1_Mur2 SINE Alu -6 143 2 5 1407 492 318 139 38 chrX 107866493 107867019 -58783277 - L1M5 LINE L1 -2687 3459 2881 5 1407 243 88 0 0 chrX 107867248 107867282 -58783014 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 1407 239 320 208 0 chrX 107867448 107867573 -58782723 + ORR1E LTR MaLR 8 158 -201 5 1407 1762 318 35 16 chrX 107867870 107868349 -58781947 - Lx8 LINE L1 -466 7007 6525 5 1407 429 20 0 0 chrX 107868349 107868399 -58781897 + (TC)n Simple_repeat Simple_repeat 2 51 0 5 1407 1762 318 35 16 chrX 107868399 107868456 -58781840 - Lx8 LINE L1 -949 6524 6456 5 1407 811 54 0 23 chrX 107868456 107868588 -58781708 + L1Md_F2 LINE L1 6454 6582 0 5 1407 1762 318 35 16 chrX 107868588 107868676 -58781620 - Lx8 LINE L1 -1018 6455 6372 5 1407 394 333 122 34 chrX 107868673 107869024 -58781272 + Lx8 LINE L1 7065 7446 -27 5 1407 2609 154 20 60 chrX 107869058 107869646 -58780650 + L1_Mur3 LINE L1 2730 3294 -2586 5 1407 2119 126 62 0 chrX 107870310 107870668 -58779628 + L1_Mus3 LINE L1 6255 6634 -4 5 1407 448 272 73 19 chrX 107870690 107870896 -58779400 + L1MA5 LINE L1 5653 5869 -431 5 1407 597 148 0 0 chrX 107871094 107871222 -58779074 + (TC)n Simple_repeat Simple_repeat 2 129 0 5 1407 220 173 30 30 chrX 107871201 107871332 -58778964 + (TCTG)n Simple_repeat Simple_repeat 2 132 0 5 1407 2122 289 75 11 chrX 107871369 107872087 -58778209 - Lx8 LINE L1 -354 7119 6356 5 175 3307 173 11 21 chrX 107872087 107872549 -58777747 + RLTR20D LTR ERVK 1 464 -104 5 1408 555 53 0 0 chrX 107872549 107872624 -58777672 + (TG)n Simple_repeat Simple_repeat 1 75 0 5 1408 3307 173 11 21 chrX 107872624 107872735 -58777561 + RLTR20D LTR ERVK 465 568 0 5 1408 475 332 129 54 chrX 107872738 107873219 -58777077 - Lx8 LINE L1 -1115 6358 5842 5 1408 22 0 0 0 chrX 107873661 107873683 -58776613 + AT_rich Low_complexity Low_complexity 1 22 0 5 1408 234 245 82 0 chrX 107873925 107874002 -58776294 - MIR SINE MIR 0 268 182 5 1408 1123 227 21 59 chrX 107874501 107874836 -58775460 - RMER1C Other Other -18 1324 907 5 1408 8254 30 13 2 chrX 107874803 107875837 -58774459 - L1Md_F2 LINE L1 0 6582 5538 5 1408 1954 261 72 25 chrX 107875841 107876372 -58773924 - RMER1C Other Other -293 1049 494 5 1408 259 366 68 15 chrX 107876798 107876931 -58773365 + MIR SINE MIR 39 178 -84 5 1408 27 0 0 0 chrX 107877021 107877048 -58773248 + AT_rich Low_complexity Low_complexity 1 27 0 5 1408 306 0 0 0 chrX 107877453 107877487 -58772809 + (TAA)n Simple_repeat Simple_repeat 3 36 0 5 1408 217 396 92 0 chrX 107877548 107877712 -58772584 + MIR SINE MIR 15 193 -69 5 1408 269 256 31 62 chrX 107877862 107877958 -58772338 - MamSINE1 SINE tRNA -2 288 196 5 1408 445 299 0 0 chrX 107878694 107878791 -58771505 - B1F SINE Alu -52 97 1 5 1408 21 0 0 0 chrX 107878827 107878848 -58771448 + AT_rich Low_complexity Low_complexity 1 21 0 5 1408 3357 56 42 20 chrX 107879436 107879894 -58770402 + L1Md_F3 LINE L1 6117 6584 0 5 1408 333 0 0 0 chrX 107880091 107880128 -58770168 + (T)n Simple_repeat Simple_repeat 1 37 0 5 1408 2098 175 32 16 chrX 107880209 107880586 -58769710 - MTC LTR MaLR 0 421 39 5 1408 1840 162 67 78 chrX 107880586 107880973 -58769323 - ORR1B1 LTR MaLR -11 383 1 5 1408 235 182 23 0 chrX 107880973 107881015 -58769281 - MTC LTR MaLR -376 45 3 5 1408 25 0 0 0 chrX 107881017 107881042 -58769254 + AT_rich Low_complexity Low_complexity 1 25 0 5 1408 505 195 225 99 chrX 107881155 107881337 -58768959 - ORR1D1 LTR MaLR -167 207 3 5 1408 534 91 0 0 chrX 107881562 107881639 -58768657 + (GA)n Simple_repeat Simple_repeat 1 77 0 5 1408 590 302 71 0 chrX 107881992 107882174 -58768122 + Lx9 LINE L1 6464 6658 -986 5 1408 3810 44 4 0 chrX 107882175 107882633 -58767663 + L1Md_F2 LINE L1 6102 6561 -21 5 1408 378 85 0 0 chrX 107882633 107882692 -58767604 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 1408 701 331 65 11 chrX 107882697 107883051 -58767245 + Lx9 LINE L1 6678 7050 -594 5 1408 1279 229 0 20 chrX 107883072 107883322 -58766974 - MTD LTR MaLR 0 419 175 5 1408 575 337 32 12 chrX 107883339 107883585 -58766711 + Lx9 LINE L1 7072 7322 -322 5 1408 247 0 82 68 chrX 107883611 107883684 -58766612 + (TTG)n Simple_repeat Simple_repeat 1 74 0 5 1408 315 0 0 0 chrX 107883705 107883740 -58766556 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1408 252 0 0 0 chrX 107883740 107883767 -58766529 + (GA)n Simple_repeat Simple_repeat 1 28 0 5 1408 564 195 9 26 chrX 107883767 107883883 -58766413 - B1_Mus2 SINE Alu -22 125 12 5 1408 251 328 15 15 chrX 107883887 107884017 -58766279 + Lx9 LINE L1 7323 7452 -192 5 1408 1315 259 48 23 chrX 107884313 107885034 -58765262 + L1_Rod LINE L1 867 1606 -4241 5 1408 2745 188 145 18 chrX 107885034 107885571 -58764725 + RMER6C LTR ERVK 1 623 -67 5 1408 2854 82 42 2 chrX 107885571 107885973 -58764323 + BGLII_Mus LTR ERVK 3 420 -2 5 1408 2745 188 145 18 chrX 107885973 107886047 -58764249 + RMER6C LTR ERVK 624 690 0 5 1408 24 67 0 0 chrX 107889556 107889601 -58760695 + AT_rich Low_complexity Low_complexity 1 45 0 5 1408 23 33 0 0 chrX 107889633 107889663 -58760633 + AT_rich Low_complexity Low_complexity 1 30 0 5 1408 883 280 5 5 chrX 107890766 107890981 -58759315 - B3 SINE B2 -1 215 1 5 1408 26 30 0 0 chrX 107891434 107891467 -58758829 + AT_rich Low_complexity Low_complexity 1 33 0 5 1408 1125 57 0 0 chrX 107891776 107891917 -58758379 - B1_Mus2 SINE Alu -6 141 1 5 1408 417 351 23 34 chrX 107892798 107892975 -58757321 - MER20 DNA MER1_type -21 198 24 5 1408 23 0 0 0 chrX 107894055 107894078 -58756218 + AT_rich Low_complexity Low_complexity 1 23 0 5 1408 18862 125 12 2 chrX 107897154 107900663 -58749633 + L1_Mus2 LINE L1 671 4213 -1670 5 1408 7506 79 6 5 chrX 107900658 107901860 -58748436 + L1_Mus2 LINE L1 5371 6566 0 5 1408 27 62 0 0 chrX 107901940 107901988 -58748308 + AT_rich Low_complexity Low_complexity 1 48 0 5 1408 378 0 0 0 chrX 107902656 107902698 -58747598 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1408 361 353 81 24 chrX 107903262 107903509 -58746787 + MIR SINE MIR 1 261 -1 5 1408 297 365 78 16 chrX 107903972 107904228 -58746068 + L2 LINE L2 1908 2179 -1240 5 1408 267 191 0 0 chrX 107904659 107904722 -58745574 + (TAGA)n Simple_repeat Simple_repeat 2 64 0 5 1408 861 169 17 23 chrX 107904979 107905155 -58745141 - Lx3B LINE L1 -5 6968 6794 5 1408 27 73 0 0 chrX 107905347 107905402 -58744894 + AT_rich Low_complexity Low_complexity 1 55 0 5 1408 189 322 105 24 chrX 107905405 107905529 -58744767 - MIR SINE MIR -5 257 124 5 1408 316 335 40 60 chrX 107905841 107906041 -58744255 - B3A SINE B2 0 198 3 5 1408 190 405 25 0 chrX 107907014 107907093 -58743203 + L3 LINE CR1 3325 3405 -1084 5 1408 298 224 82 17 chrX 107907192 107907323 -58742973 - L1M2 LINE L1 -529 5771 5634 5 1408 288 0 0 0 chrX 107907532 107907564 -58742732 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1408 280 262 14 9 chrX 107907578 107907708 -58742588 + L1MA4 LINE L1 5815 5937 -363 5 1408 26 0 0 0 chrX 107907959 107907985 -58742311 + AT_rich Low_complexity Low_complexity 1 26 0 5 1408 296 314 11 126 chrX 107908537 107908712 -58741584 + B3 SINE B2 59 213 -3 5 1408 414 0 0 0 chrX 107910420 107910466 -58739830 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1408 1220 21 0 0 chrX 107910466 107910610 -58739686 - B1_Mm SINE Alu -2 145 2 5 1408 24 0 0 0 chrX 107910615 107910639 -58739657 + AT_rich Low_complexity Low_complexity 1 24 0 5 1408 221 221 15 0 chrX 107912556 107912624 -58737672 + CT-rich Low_complexity Low_complexity 1 69 0 5 1408 21 57 0 0 chrX 107912796 107912831 -58737465 + AT_rich Low_complexity Low_complexity 1 35 0 5 1408 22 56 0 0 chrX 107913127 107913163 -58737133 + AT_rich Low_complexity Low_complexity 1 36 0 5 1408 229 302 68 45 chrX 107914234 107914411 -58735885 + L1MC4 LINE L1 7295 7475 -567 5 1408 228 260 178 16 chrX 107914379 107914508 -58735788 + L1MC5 LINE L1 7270 7419 -542 5 1408 251 194 14 43 chrX 107914944 107915014 -58735282 + L1ME2z LINE L1 6362 6429 -15 5 1408 223 286 52 131 chrX 107916416 107916569 -58733727 + MIR SINE MIR 3 143 -119 5 1408 210 171 0 0 chrX 107917861 107917902 -58732394 + T-rich Low_complexity Low_complexity 1 41 0 5 1408 30 77 0 0 chrX 107918702 107918767 -58731529 + AT_rich Low_complexity Low_complexity 1 65 0 5 1408 24 32 0 0 chrX 107919180 107919211 -58731085 + AT_rich Low_complexity Low_complexity 1 31 0 5 1408 4341 12 2 12 chrX 107920840 107921338 -58728958 - MT2_Mm LTR ERVL 0 493 1 5 1408 314 0 0 0 chrX 107921338 107921376 -58728920 - MERVL-int LTR ERVL 0 5485 5448 5 1408 370 179 46 35 chrX 107921376 107921463 -58728833 - ORR1A3-int LTR MaLR -1323 640 553 5 1408 40195 17 14 0 chrX 107921463 107926750 -58723546 - MERVL-int LTR ERVL -125 5360 1 5 1408 4341 12 2 12 chrX 107926750 107927248 -58723048 - MT2_Mm LTR ERVL 0 493 1 5 1408 334 370 82 6 chrX 107927685 107927867 -58722429 + Charlie1a DNA MER1_type 3 198 -1257 5 1408 477 314 93 65 chrX 107927996 107928099 -58722197 + Charlie1a DNA MER1_type 376 468 -987 5 1408 531 263 9 9 chrX 107928099 107928214 -58722082 + PB1D9 SINE Alu 1 115 -5 5 1408 477 301 259 55 chrX 107928214 107928753 -58721543 + Charlie1a DNA MER1_type 469 1131 -324 5 1408 302 393 38 0 chrX 107928782 107928965 -58721331 - LTR52 LTR ERVL -60 361 172 5 1408 2510 29 2 256 chrX 107929143 107929663 -58720633 + RLTR10 LTR ERVK 1 388 -2 5 1408 16133 24 11 47 chrX 107929667 107931102 -58719194 + RLTR10-int LTR ERVK 3 1346 -641 5 1408 198 0 0 0 chrX 107931102 107931124 -58719172 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 1408 16133 24 11 47 chrX 107931124 107931744 -58718552 + RLTR10-int LTR ERVK 1347 1983 -4 5 1408 2510 29 2 256 chrX 107931746 107932266 -58718030 + RLTR10 LTR ERVK 1 388 -2 5 1408 340 238 97 14 chrX 107932270 107932415 -58717881 + Charlie1a DNA MER1_type 1170 1326 -129 5 1408 1036 295 61 22 chrX 107932463 107933052 -58717244 + L1M2 LINE L1 3704 4315 -1828 5 1408 8129 120 35 9 chrX 107933070 107934837 -58715459 + Lx3A LINE L1 5162 6974 -7 6 1408 30 0 0 0 chrX 107934846 107934876 -58715420 + AT_rich Low_complexity Low_complexity 1 30 0 6 1408 230 176 0 38 chrX 107934880 107934933 -58715363 - L1MC2 LINE L1 -13 6331 6281 6 1408 1337 292 118 30 chrX 107935142 107936074 -58714222 + L1M2 LINE L1 4300 5313 -830 5 1408 1075 200 36 24 chrX 107936082 107936333 -58713963 - Lx7 LINE L1 0 7696 7443 6 1408 17494 157 42 5 chrX 107936353 107940222 -58710074 + L1_Mus3 LINE L1 486 4433 -1450 6 1408 6800 112 36 2 chrX 107940220 107941324 -58708972 + L1_Mus3 LINE L1 5498 6638 0 6 1408 1254 245 8 107 chrX 107941327 107941729 -58708567 - Lx7 LINE L1 -230 7466 7105 6 1408 461 277 26 6 chrX 107941896 107942052 -58708244 + L1MA8 LINE L1 5527 5685 -615 6 1408 514 303 30 0 chrX 107942058 107942256 -58708040 + L1MA8 LINE L1 6028 6231 -60 6 1408 26 74 0 0 chrX 107942267 107942321 -58707975 + AT_rich Low_complexity Low_complexity 1 54 0 6 1408 569 278 47 47 chrX 107942669 107942986 -58707310 - Lx9 LINE L1 -1260 6384 6068 6 1408 446 355 24 37 chrX 107943040 107943204 -58707092 - RSINE1 SINE B4 -1 164 3 6 1408 21 0 0 0 chrX 107943444 107943465 -58706831 + AT_rich Low_complexity Low_complexity 1 21 0 6 1408 207 0 0 0 chrX 107943682 107943705 -58706591 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 1408 1479 310 41 17 chrX 107943707 107944248 -58706048 - Lx7 LINE L1 -395 7301 6748 6 1408 306 281 84 39 chrX 107944288 107944466 -58705830 + L1M3 LINE L1 5076 5261 -879 6 1408 636 316 61 20 chrX 107944492 107944689 -58705607 + B3 SINE B2 2 206 -10 6 1408 302 311 0 54 chrX 107944720 107944832 -58705464 + L1M3 LINE L1 5349 5454 -730 6 1408 2890 150 50 47 chrX 107944991 107945591 -58704705 - Lx2B LINE L1 -2 6998 6397 6 1408 200 286 11 87 chrX 107946056 107946148 -58704148 + MIR SINE MIR 147 231 -31 6 1408 23 0 0 0 chrX 107946189 107946212 -58704084 + AT_rich Low_complexity Low_complexity 1 23 0 6 1408 298 282 54 40 chrX 107946662 107946810 -58703486 + L1M3 LINE L1 5655 5804 -385 6 1408 26 30 0 0 chrX 107946907 107946940 -58703356 + AT_rich Low_complexity Low_complexity 1 33 0 6 1408 439 366 23 0 chrX 107947052 107947183 -58703113 + B1F SINE Alu 7 140 -9 6 1408 23 54 0 0 chrX 107947365 107947402 -58702894 + AT_rich Low_complexity Low_complexity 1 37 0 6 1408 353 292 82 23 chrX 107947604 107947841 -58702455 + L1M2 LINE L1 3214 3494 -2649 6 1408 477 34 0 0 chrX 107947841 107947900 -58702396 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1408 227 319 40 86 chrX 107947900 107948162 -58702134 + L1M2 LINE L1 3495 3726 -2417 6 1408 7524 125 35 5 chrX 107948285 107951168 -58699128 - L1Md_F2 LINE L1 0 6582 4357 6 1408 3636 112 20 2 chrX 107951168 107951707 -58698589 + L1_Mus3 LINE L1 6090 6638 0 6 1408 435 368 103 0 chrX 107951757 107951912 -58698384 + B3A SINE B2 4 174 -24 6 1408 458 46 15 0 chrX 107951914 107951979 -58698317 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 1408 1393 292 90 22 chrX 107952012 107952834 -58697462 + L1M2 LINE L1 4403 5280 -863 6 1408 235 278 0 0 chrX 107952839 107952893 -58697403 - L1M1 LINE L1 -581 5722 5669 6 1408 413 328 40 10 chrX 107952906 107953202 -58697094 + L1M2 LINE L1 5303 5607 -690 6 1408 1239 238 284 5 chrX 107953374 107953789 -58696507 + MT2A LTR ERVL 1 531 -2 6 1408 21 0 0 0 chrX 107953910 107953931 -58696365 + AT_rich Low_complexity Low_complexity 1 21 0 6 1408 26 101 0 0 chrX 107954205 107954294 -58696002 + AT_rich Low_complexity Low_complexity 1 89 0 6 1408 356 0 23 0 chrX 107954657 107954701 -58695595 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1408 22 0 0 0 chrX 107954935 107954957 -58695339 + AT_rich Low_complexity Low_complexity 1 22 0 6 1408 430 304 91 52 chrX 107956129 107956438 -58693858 + Lx9 LINE L1 5793 6113 -1531 6 1408 713 296 58 13 chrX 107956441 107956780 -58693516 - Lx8 LINE L1 -461 7012 6620 6 1408 1340 87 5 0 chrX 107956800 107956984 -58693312 - B2_Mm1a SINE B2 -7 186 2 6 1408 1057 322 101 22 chrX 107957005 107957691 -58692605 - Lx7 LINE L1 -1168 6528 5789 6 1408 481 255 7 20 chrX 107957700 107957848 -58692448 + Lx5 LINE L1 4846 4991 -886 6 1408 518 196 0 18 chrX 107957851 107957960 -58692336 + Lx5 LINE L1 5663 5769 -1281 6 1408 1859 76 0 4 chrX 107958270 107958520 -58691776 + L1_Mus1 LINE L1 6318 6566 -1 6 1408 21 0 0 0 chrX 107958549 107958570 -58691726 + AT_rich Low_complexity Low_complexity 1 21 0 6 1408 224 203 28 28 chrX 107958612 107958683 -58691613 + (TATG)n Simple_repeat Simple_repeat 3 73 0 6 1408 697 172 86 0 chrX 107958773 107958901 -58691395 - B1_Mur4 SINE Alu -10 140 2 6 1408 57 16 0 0 chrX 107959024 107959088 -58691208 + AT_rich Low_complexity Low_complexity 1 64 0 6 1408 24 53 0 0 chrX 107960944 107960982 -58689314 + AT_rich Low_complexity Low_complexity 1 38 0 6 1408 482 317 0 40 chrX 107961421 107961569 -58688727 + RSINE1 SINE B4 3 144 -21 6 1408 751 276 31 31 chrX 107961753 107961779 -58688517 + Lx3B LINE L1 5754 5779 -1681 6 1408 2606 94 23 3 chrX 107961779 107962164 -58688132 + L1_Mus3 LINE L1 6246 6638 0 6 1408 4115 118 4 13 chrX 107962164 107962829 -58687467 + Lx3B LINE L1 5780 6438 -535 6 1408 595 265 0 0 chrX 107963133 107963265 -58687031 - B1_Mur2 SINE Alu -17 132 1 6 1408 216 0 0 0 chrX 107964458 107964482 -58685814 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1408 21 0 0 0 chrX 107964656 107964677 -58685619 + AT_rich Low_complexity Low_complexity 1 21 0 6 1408 723 261 24 28 chrX 107964678 107964891 -58685405 - B3 SINE B2 -2 214 3 6 1408 1089 69 7 0 chrX 107964964 107965109 -58685187 - B1_Mm SINE Alu 0 147 2 6 1408 249 357 68 30 chrX 107965110 107965243 -58685053 + L2b LINE L2 3238 3375 0 6 1408 837 316 84 5 chrX 107965459 107966028 -58684268 + L1MA5 LINE L1 5676 6289 -11 6 1408 22 0 0 0 chrX 107967460 107967482 -58682814 + AT_rich Low_complexity Low_complexity 1 22 0 6 1408 21 0 0 0 chrX 107969051 107969072 -58681224 + AT_rich Low_complexity Low_complexity 1 21 0 6 1408 23 0 0 0 chrX 107969490 107969513 -58680783 + AT_rich Low_complexity Low_complexity 1 23 0 6 1408 637 180 131 20 chrX 107969870 107970068 -58680228 + Lx9 LINE L1 7425 7644 0 6 1408 2036 99 7 0 chrX 107970070 107970373 -58679923 - MusHAL1 LINE L1 -1155 1557 1253 6 1408 1424 146 0 0 chrX 107970370 107970596 -58679700 + L1_Mm LINE L1 4936 5161 -722 6 1408 1639 87 0 0 chrX 107970593 107970811 -58679485 - Lx LINE L1 -849 5805 5588 6 1408 567 215 0 37 chrX 107970810 107970945 -58679351 + L1_Mm LINE L1 5154 5283 -600 6 1408 675 64 0 0 chrX 107970949 107971043 -58679253 + L1_Mus2 LINE L1 6473 6566 0 6 1408 1606 144 12 19 chrX 107971030 107971323 -58678973 + L1_Mm LINE L1 5309 5594 -568 6 1408 1002 309 57 11 chrX 107971577 107971927 -58678369 + Lx9 LINE L1 6367 6732 -912 6 1408 3179 108 10 0 chrX 107971939 107972421 -58677875 - Lx LINE L1 0 6654 6168 6 1408 809 50 0 0 chrX 107972421 107972521 -58677775 + Lx2 LINE L1 6408 6507 -490 6 1408 1925 296 37 49 chrX 107972520 107972962 -58677334 + Lx9 LINE L1 6729 7150 -494 6 1408 6256 93 6 0 chrX 107972962 107973824 -58676472 + L1_Mus3 LINE L1 5765 6631 -7 6 1408 1925 296 37 49 chrX 107973824 107974135 -58676161 + Lx9 LINE L1 7151 7473 -171 6 1408 5308 132 15 4 chrX 107974246 107975262 -58675034 + L1_Mus4 LINE L1 4973 6001 -635 6 1408 218 314 0 85 chrX 107976222 107976316 -58673980 + RSINE1 SINE B4 79 164 -1 6 1408 410 312 105 54 chrX 107976502 107976874 -58673422 + L1M5 LINE L1 3090 3480 -2666 6 1408 2320 36 0 0 chrX 107976877 107977155 -58673141 + L1Md_F3 LINE L1 6293 6570 -14 6 1408 234 0 0 0 chrX 107978586 107978612 -58671684 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1408 3797 66 10 6 chrX 107979028 107979534 -58670762 - L1Md_F2 LINE L1 -12 6570 6063 6 1408 541 316 85 25 chrX 107979563 107980034 -58670262 + L1M3de LINE L1 1449 1947 -4706 6 1408 412 167 8 34 chrX 107980063 107980181 -58670115 + Lx3B LINE L1 6859 6973 0 6 1408 705 217 92 22 chrX 107980379 107980443 -58669853 - MTEa LTR MaLR 0 379 314 6 1408 467 0 35 0 chrX 107980443 107980501 -58669795 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 6 1408 705 217 92 22 chrX 107980501 107980620 -58669676 - MTEa LTR MaLR -66 313 184 6 1408 252 361 0 12 chrX 107980677 107980761 -58669535 - ID2 SINE ID 0 83 1 6 1408 554 288 55 36 chrX 107980761 107981122 -58669174 - L1_Mur3 LINE L1 -86 5794 5405 6 1408 521 215 37 35 chrX 107981419 107981588 -58668708 + Lx3C LINE L1 6823 7000 0 6 1408 242 273 0 29 chrX 107982141 107982209 -58668087 + L1M3de LINE L1 4320 4385 -2341 6 1408 345 295 12 18 chrX 107982233 107982402 -58667894 + L1M3de LINE L1 4436 4603 -2123 6 1408 225 295 100 45 chrX 107982413 107982523 -58667773 + L1M3de LINE L1 4656 4771 -1955 6 1408 388 331 35 62 chrX 107982558 107982703 -58667593 + RSINE1 SINE B4 25 165 0 6 1408 23 86 0 0 chrX 107982717 107982775 -58667521 + AT_rich Low_complexity Low_complexity 1 58 0 6 1408 389 66 16 0 chrX 107982804 107982865 -58667431 + (TA)n Simple_repeat Simple_repeat 1 62 0 6 1408 656 289 114 13 chrX 107982877 107983333 -58666963 + L1M3de LINE L1 4846 5347 -1379 6 1408 301 256 169 13 chrX 107983473 107983627 -58666669 + L1MB1 LINE L1 5990 6167 -1 6 1408 484 256 154 48 chrX 107983614 107983983 -58666313 + L1M5 LINE L1 3678 4086 -2060 6 1408 238 397 69 0 chrX 107984467 107984598 -58665698 - LTR50 LTR ERVL -644 151 12 6 1408 21 36 0 0 chrX 107984625 107984653 -58665643 + AT_rich Low_complexity Low_complexity 1 28 0 6 1408 363 278 71 51 chrX 107985006 107985203 -58665093 + L1M5 LINE L1 4183 4383 -1763 6 1408 2887 112 2 0 chrX 107985218 107985638 -58664658 - L1_Mus3 LINE L1 -196 6442 6022 6 1408 1102 131 14 40 chrX 107985638 107985861 -58664435 + L1_Mus3 LINE L1 6419 6635 -3 6 1408 259 138 60 0 chrX 107986001 107986078 -58664218 + L1M5 LINE L1 4576 4661 -1485 6 1408 232 283 17 0 chrX 107986258 107986318 -58663978 + B4 SINE B4 115 175 -117 6 1408 447 364 63 90 chrX 107986418 107986940 -58663356 + L1M5 LINE L1 5287 5794 -446 6 1408 445 306 52 7 chrX 107986946 107987081 -58663215 + RSINE1 SINE B4 4 144 -21 6 1408 414 39 0 0 chrX 107987081 107987133 -58663163 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 1408 280 39 39 0 chrX 107987594 107987645 -58662651 - L1Md_F2 LINE L1 0 6582 6530 6 1408 4046 215 48 32 chrX 107987766 107988813 -58661483 + Lx7 LINE L1 4539 5601 -279 6 1408 1715 220 31 5 chrX 107988814 107989197 -58661099 + ORR1B1 LTR MaLR 2 394 0 6 1408 2441 261 100 86 chrX 107989198 107990007 -58660289 + ORR1B1-int LTR MaLR 2 823 -686 6 1408 195 42 0 0 chrX 107990007 107990031 -58660265 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1408 2441 261 100 86 chrX 107990031 107990707 -58659589 + ORR1B1-int LTR MaLR 824 1509 0 6 1408 1493 194 138 9 chrX 107990707 107990858 -58659438 + ORR1B1 LTR MaLR 1 192 -202 6 1408 504 0 0 0 chrX 107990858 107990914 -58659382 + (TC)n Simple_repeat Simple_repeat 1 56 0 6 1408 1493 194 138 9 chrX 107990914 107991111 -58659185 + ORR1B1 LTR MaLR 193 394 0 6 1408 1551 234 22 56 chrX 107991111 107991399 -58658897 + Lx7 LINE L1 5600 5874 -1822 6 1408 1846 127 65 0 chrX 107991399 107991706 -58658590 + ORR1A2 LTR MaLR 1 327 0 6 1408 1551 234 22 56 chrX 107991706 107991879 -58658417 + Lx7 LINE L1 5875 6045 -1651 6 1408 3428 282 51 48 chrX 107991944 107992379 -58657917 + Lx7 LINE L1 6192 6636 -1060 6 1408 2294 175 37 5 chrX 107992379 107992787 -58657509 + MTC LTR MaLR 1 421 0 6 1408 3428 282 51 48 chrX 107992787 107993518 -58656778 + Lx7 LINE L1 6637 7362 -334 6 1408 254 275 91 9 chrX 107993565 107993675 -58656621 + Lx7 LINE L1 7565 7683 -13 6 1408 699 46 0 0 chrX 107993879 107993966 -58656330 + (TTCC)n Simple_repeat Simple_repeat 2 88 0 6 1408 444 162 88 0 chrX 107993966 107994046 -58656250 + MTC LTR MaLR 152 238 -183 6 1408 2829 76 48 2 chrX 107994106 107994504 -58655792 + L1_Mus3 LINE L1 6216 6631 -7 7 1408 590 323 83 15 chrX 107994539 107994935 -58655361 - L1MA6 LINE L1 -127 6173 5751 7 1408 479 347 24 0 chrX 107995115 107995239 -58655057 - RSINE1 SINE B4 -38 127 1 7 1408 887 221 50 23 chrX 107995240 107995500 -58654796 - L1M1 LINE L1 -682 5618 5352 7 1408 198 71 0 0 chrX 107995567 107995595 -58654701 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 1408 199 312 16 0 chrX 107995704 107995768 -58654528 + MIRc SINE MIR 107 171 -97 7 1408 341 319 105 27 chrX 107995987 107996206 -58654090 + Tigger15a DNA TcMar 364 599 -116 7 1408 28 71 0 0 chrX 107996861 107996917 -58653379 + AT_rich Low_complexity Low_complexity 1 56 0 7 1408 541 308 11 29 chrX 107996918 107997092 -58653204 + B3 SINE B2 43 213 -3 7 1408 22 35 0 0 chrX 107998882 107998911 -58651385 + AT_rich Low_complexity Low_complexity 1 29 0 7 1408 21 0 0 0 chrX 108000106 108000127 -58650169 + AT_rich Low_complexity Low_complexity 1 21 0 1 1408 414 0 0 0 chrX 108001884 108001930 -58648366 + (TC)n Simple_repeat Simple_repeat 1 46 0 2 1408 213 39 0 0 chrX 108001930 108001955 -58648341 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1408 279 0 0 0 chrX 108001963 108001994 -58648302 + (GA)n Simple_repeat Simple_repeat 2 32 0 4 1408 651 83 28 0 chrX 108002382 108002490 -58647806 + L1_Mus3 LINE L1 6523 6633 -5 5 1409 25 0 0 0 chrX 108005134 108005159 -58645137 + AT_rich Low_complexity Low_complexity 1 25 0 6 1409 220 139 0 60 chrX 108005205 108005289 -58645007 + GA-rich Low_complexity Low_complexity 2 80 0 7 1409 204 125 0 0 chrX 108006924 108006956 -58643340 + (GGAGA)n Simple_repeat Simple_repeat 4 35 0 8 1409 473 144 0 11 chrX 108007686 108007777 -58642519 + GA-rich Low_complexity Low_complexity 3 92 0 9 1409 208 259 17 0 chrX 108008678 108008736 -58641560 + CT-rich Low_complexity Low_complexity 5 63 0 1 1409 27 49 0 0 chrX 108009343 108009384 -58640912 + AT_rich Low_complexity Low_complexity 1 41 0 1 1409 483 202 0 0 chrX 108011060 108011169 -58639127 + (CA)n Simple_repeat Simple_repeat 2 110 0 1 1409 226 279 15 0 chrX 108012433 108012501 -58637795 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 1409 623 278 33 28 chrX 108014545 108014726 -58635570 - B3A SINE B2 -16 182 1 1 1409 21 82 0 0 chrX 108014822 108014871 -58635425 + AT_rich Low_complexity Low_complexity 1 49 0 1 1409 474 88 0 0 chrX 108014976 108015044 -58635252 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 1409 1120 174 0 5 chrX 108017190 108017403 -58632893 + Lx2B LINE L1 6784 6995 -5 1 1409 255 103 0 0 chrX 108019113 108019152 -58631144 + (TTA)n Simple_repeat Simple_repeat 1 39 0 1 1409 4277 145 19 4 chrX 108019153 108019845 -58630451 - Lx4A LINE L1 -13 7045 6344 1 1409 453 66 0 0 chrX 108019857 108019918 -58630378 + (CATA)n Simple_repeat Simple_repeat 2 62 0 2 1409 393 136 0 0 chrX 108019927 108019993 -58630303 + (GGGAGA)n Simple_repeat Simple_repeat 1 66 0 2 1409 180 0 0 0 chrX 108021417 108021437 -58628859 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1409 180 0 0 0 chrX 108021855 108021875 -58628421 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 1409 886 262 101 19 chrX 108022165 108022433 -58627863 + B4 SINE B4 3 292 0 2 1409 615 120 0 0 chrX 108022476 108022593 -58627703 + (TC)n Simple_repeat Simple_repeat 2 118 0 2 1409 268 208 98 31 chrX 108022753 108022851 -58627445 - B1F2 SINE Alu -2 115 13 2 1409 294 307 100 21 chrX 108022973 108023113 -58627183 + MIR SINE MIR 58 208 -54 2 1409 2670 209 36 14 chrX 108024939 108025581 -58624715 - L1_Mur3 LINE L1 -677 5203 4548 2 1409 2064 244 71 61 chrX 108025579 108026173 -58624123 + Lx7 LINE L1 6310 6909 -787 2 1409 393 298 87 9 chrX 108026174 108026289 -58624007 - RSINE1 SINE B4 -41 124 1 3 1409 446 0 19 0 chrX 108026325 108026379 -58623917 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1409 211 323 0 30 chrX 108026383 108026450 -58623846 - ID2 SINE ID -11 72 8 3 1409 1519 6 0 14 chrX 108026474 108026843 -58623453 + (TTC)n Simple_repeat Simple_repeat 1 363 0 3 1409 1004 151 6 0 chrX 108026844 108027023 -58623273 + CT-rich Low_complexity Low_complexity 1 180 0 3 1409 648 151 113 62 chrX 108027050 108027227 -58623069 - B2_Mm2 SINE B2 -9 186 1 3 1409 181 338 109 30 chrX 108029376 108029541 -58620755 - L2c LINE L2 -6 3381 3204 3 1409 21 0 0 0 chrX 108030305 108030326 -58619970 + AT_rich Low_complexity Low_complexity 1 21 0 3 1409 181 341 20 88 chrX 108033744 108033892 -58616404 - MIR SINE MIR -47 215 78 3 1409 5468 244 92 79 chrX 108034052 108036084 -58614212 - Lx9 LINE L1 0 7644 5587 3 1409 23480 112 42 73 chrX 108036109 108039406 -58610890 - L1_Mus2 LINE L1 0 6566 3172 4 1409 255 93 0 0 chrX 108039406 108039449 -58610847 + (CCAA)n Simple_repeat Simple_repeat 2 44 0 4 1409 23480 122 57 103 chrX 108039449 108039542 -58610754 - L1_Mus2 LINE L1 -2712 3171 3071 4 1409 2779 56 3 0 chrX 108039542 108039898 -58610398 + MTA_Mm LTR MaLR 40 396 0 4 1409 23480 122 57 103 chrX 108039898 108040597 -58609699 - L1_Mus2 LINE L1 -2712 3070 2309 4 1409 4710 59 0 0 chrX 108040597 108041175 -58609121 + L1_Mus1 LINE L1 5987 6564 -3 4 1409 23480 116 28 82 chrX 108041175 108043321 -58606975 - L1_Mus2 LINE L1 -3575 2308 272 4 1409 3382 219 23 42 chrX 108043324 108044243 -58606053 - Lx9 LINE L1 -297 5550 4650 3 1409 344 333 39 59 chrX 108044243 108044396 -58605900 - MER20 DNA MER1_type -67 152 3 4 1409 1067 83 7 0 chrX 108044402 108044547 -58605749 + B1_Mus2 SINE Alu 1 146 -1 4 1409 225 0 0 0 chrX 108044562 108044587 -58605709 + (CAA)n Simple_repeat Simple_repeat 3 27 0 4 1409 288 234 12 14 chrX 108045015 108045101 -58605195 - MER45C DNA Tip100 -100 853 769 4 1409 492 369 41 15 chrX 108045509 108045722 -58604574 - MER45C DNA Tip100 -733 220 1 4 1409 1631 71 0 0 chrX 108046147 108046359 -58603937 - L1_Mus1 LINE L1 0 6567 6356 4 1409 529 211 18 0 chrX 108048409 108048518 -58601778 + Lx6 LINE L1 6538 6648 -812 4 1409 1126 268 54 3 chrX 108048517 108048832 -58601464 + Lx6 LINE L1 7124 7454 -6 4 1409 299 320 0 0 chrX 108048857 108048932 -58601364 + MIR SINE MIR 18 92 -170 5 1409 500 344 83 0 chrX 108048989 108049146 -58601150 + B4A SINE B4 1 170 -122 5 1409 225 0 0 0 chrX 108049232 108049257 -58601039 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 1409 554 0 15 0 chrX 108049257 108049322 -58600974 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 5 1409 24 53 0 0 chrX 108049476 108049514 -58600782 + AT_rich Low_complexity Low_complexity 1 38 0 5 1409 264 275 124 29 chrX 108049608 108049713 -58600583 - MIR3 SINE MIR -45 163 49 5 1409 314 107 18 0 chrX 108050174 108050230 -58600066 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1409 390 167 0 0 chrX 108050327 108050411 -58599885 + (CA)n Simple_repeat Simple_repeat 2 85 0 5 1409 327 164 0 0 chrX 108050670 108050731 -58599565 + T-rich Low_complexity Low_complexity 1 61 0 5 1409 7583 64 11 2 chrX 108050865 108051842 -58598454 - L1Md_F2 LINE L1 -2 6580 5595 5 1409 3288 108 146 2 chrX 108053556 108054078 -58596218 + MT2B LTR ERVL 5 601 0 6 1409 404 320 0 0 chrX 108055889 108056017 -58594279 + B1F SINE Alu 5 132 -17 6 1409 3685 50 0 4 chrX 108056024 108056484 -58593812 - L1Md_F2 LINE L1 -12 6570 6113 6 1409 488 208 8 0 chrX 108056492 108056622 -58593674 + Lx9 LINE L1 7513 7643 -1 6 1409 1216 266 83 40 chrX 108057001 108057545 -58592751 - MER45B DNA Tip100 -91 949 383 6 1409 834 301 45 40 chrX 108057600 108057953 -58592343 + MTEb LTR MaLR 25 379 0 6 1409 3035 12 0 0 chrX 108058445 108058782 -58591514 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 1409 5710 24 3 8 chrX 108058782 108059488 -58590808 - IAPEz-int LTR ERVK 0 6481 5780 6 1409 26989 27 48 11 chrX 108059484 108062902 -58587394 - IAPEz-int LTR ERVK -2928 3553 8 6 1409 3035 12 0 0 chrX 108062902 108063239 -58587057 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 1409 554 254 20 27 chrX 108063356 108063502 -58586794 + ORR1D2 LTR MaLR 1 145 -225 6 1409 216 0 0 0 chrX 108063506 108063530 -58586766 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1409 34340 69 1 14 chrX 108063539 108069694 -58580602 - L1Md_F2 LINE L1 0 6582 508 6 1409 628 258 26 0 chrX 108069734 108069889 -58580407 + ORR1D2 LTR MaLR 204 362 -8 6 1409 207 220 0 0 chrX 108070061 108070111 -58580185 + (TA)n Simple_repeat Simple_repeat 2 51 0 7 1409 27 0 0 0 chrX 108070283 108070310 -58579986 + AT_rich Low_complexity Low_complexity 1 27 0 7 1409 728 290 39 80 chrX 108070313 108070624 -58579672 - L1MA5 LINE L1 -385 6775 6475 7 1409 195 42 0 0 chrX 108070624 108070648 -58579648 + (TA)n Simple_repeat Simple_repeat 2 25 0 7 1409 728 290 39 80 chrX 108070648 108070797 -58579499 - L1MA5 LINE L1 -686 6474 6345 7 1409 1849 95 22 0 chrX 108070797 108071071 -58579225 - L1_Mus3 LINE L1 -1 6637 6358 7 1409 728 287 40 55 chrX 108071071 108071307 -58578989 - L1MA5 LINE L1 -816 6344 6107 7 1409 1346 217 146 35 chrX 108071307 108071684 -58578612 + MTD LTR MaLR 1 419 0 7 1409 386 285 42 36 chrX 108071684 108071739 -58578557 - L1MA5 LINE L1 -897 6106 6052 7 1409 324 320 18 46 chrX 108071739 108071958 -58578338 - L1MA5 LINE L1 -3642 3692 3480 7 1409 341 367 78 29 chrX 108072219 108072567 -58577729 - L1MA5 LINE L1 -4675 2333 1969 7 1409 21 36 0 0 chrX 108073211 108073239 -58577057 + AT_rich Low_complexity Low_complexity 1 28 0 7 1409 6883 136 19 22 chrX 108073244 108075364 -58574932 + L1_Mur2 LINE L1 400 2512 -3365 7 1409 306 120 0 0 chrX 108075364 108075414 -58574882 + L1_Mm LINE L1 3407 3456 -2427 7 1409 36797 20 0 4 chrX 108075417 108082244 -58568052 + L1Md_A LINE L1 1 5586 -297 7 1409 9047 3 0 0 chrX 108082244 108083240 -58567056 + L1Md_A LINE L1 5587 6582 0 7 1409 13604 136 10 6 chrX 108083242 108084535 -58565761 + Lx2 LINE L1 3446 4755 -1128 8 1409 2687 72 96 0 chrX 108084535 108084910 -58565386 + IAPLTR2a LTR ERVK 1 411 0 8 1409 13604 166 51 11 chrX 108084910 108087058 -58563238 + Lx2 LINE L1 4756 6997 0 8 1409 390 21 0 0 chrX 108087060 108087107 -58563189 + (GA)n Simple_repeat Simple_repeat 1 47 0 8 1409 18307 129 22 36 chrX 108087107 108090380 -58559916 + Lx4A LINE L1 2500 5767 -110 8 1409 1927 93 7 4 chrX 108090380 108090659 -58559637 + L1_Mus3 LINE L1 6357 6636 -2 8 1409 18307 129 22 36 chrX 108090659 108090703 -58559593 + Lx4A LINE L1 5768 5778 -99 8 1409 819 54 0 128 chrX 108090703 108090851 -58559445 + L1Md_F3 LINE L1 6443 6571 -13 8 1409 18307 142 16 50 chrX 108090851 108091834 -58558462 + Lx4A LINE L1 5779 6758 -300 8 1409 665 329 78 44 chrX 108091848 108092120 -58558176 + B4A SINE B4 6 274 -18 8 1409 351 0 0 0 chrX 108092137 108092176 -58558120 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1409 32367 64 1 53 chrX 108092279 108092959 -58557337 + L1Md_F2 LINE L1 643 1284 -5440 8 1409 3220 50 3 0 chrX 108092959 108093343 -58556953 - IAPEY_LTR LTR ERVK 0 385 1 8 1409 32367 51 6 2 chrX 108093343 108097634 -58552662 + L1Md_F2 LINE L1 1285 5589 -294 8 1409 7434 73 6 7 chrX 108097635 108098692 -58551604 + L1Md_F2 LINE L1 5590 6582 0 8 1409 1461 63 0 0 chrX 108098869 108099059 -58551237 + L1Md_T LINE L1 6393 6582 0 9 1409 855 183 31 102 chrX 108100098 108100323 -58549973 - ORR1D1 LTR MaLR -3 371 163 9 1409 234 176 0 0 chrX 108100325 108100376 -58549920 + GA-rich Low_complexity Low_complexity 2 52 0 9 1409 425 231 135 0 chrX 108100385 108100489 -58549807 - ORR1D1 LTR MaLR -198 169 52 9 1409 7597 47 1 8 chrX 108100495 108101739 -58548557 - L1Md_F3 LINE L1 -14 6570 5333 9 1409 424 199 53 22 chrX 108101739 108101844 -58548452 - ORR1D1 LTR MaLR -258 112 1 9 1409 1732 276 64 63 chrX 108101975 108102262 -58548034 - MERVL_2A-int LTR ERVL -4450 1311 996 9 1409 550 285 76 139 chrX 108102262 108102657 -58547639 - ORR1D2 LTR MaLR 0 370 1 9 1409 1732 276 64 63 chrX 108102657 108102784 -58547512 - MERVL_2A-int LTR ERVL -4766 995 879 9 1409 6753 49 0 0 chrX 108102784 108103601 -58546695 + L1Md_F2 LINE L1 5752 6568 -14 9 1409 1732 298 64 62 chrX 108103601 108104276 -58546020 - MERVL_2A-int LTR ERVL -4883 878 173 9 1409 369 0 0 0 chrX 108104479 108104520 -58545776 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 1409 351 0 0 0 chrX 108104520 108104558 -58545738 + (GA)n Simple_repeat Simple_repeat 1 39 0 9 1409 1255 88 26 0 chrX 108104620 108104812 -58545484 + L1_Mus3 LINE L1 6437 6633 -5 1 1409 1541 234 88 5 chrX 108105065 108105452 -58544844 - MTD LTR MaLR 0 419 1 1 1409 291 280 56 56 chrX 108105452 108105577 -58544719 - MTD-int LTR MaLR 0 1258 1134 1 1409 26 0 0 0 chrX 108105577 108105603 -58544693 + AT_rich Low_complexity Low_complexity 1 26 0 1 1409 282 75 17 0 chrX 108105603 108105663 -58544633 - L1_Mus1 LINE L1 0 6567 6513 1 1409 526 234 65 111 chrX 108105688 108106039 -58544257 - L1_Rod LINE L1 -430 5417 5083 1 1409 880 237 279 0 chrX 108106162 108106449 -58543847 - MTD-int LTR MaLR -250 1008 642 1 1409 753 289 28 36 chrX 108106416 108106664 -58543632 - MTD-int LTR MaLR -1011 247 2 1 1409 1259 265 65 18 chrX 108106664 108107064 -58543232 - MTD LTR MaLR 0 419 1 1 1409 2681 227 63 59 chrX 108107064 108107805 -58542491 - MTD-int LTR MaLR 0 1258 515 1 1409 29919 108 21 14 chrX 108107932 108108063 -58542233 - L1_Mus2 LINE L1 -486 6152 6021 1 1409 226 231 0 0 chrX 108108063 108108115 -58542181 + MER67B LTR ERV1 360 411 -250 1 1409 29919 108 21 14 chrX 108108115 108113853 -58536443 - L1_Mus2 LINE L1 -486 6020 214 1 1409 3134 170 19 42 chrX 108113854 108114546 -58535750 - L1_Mur3 LINE L1 -2159 3718 3043 1 1409 3708 145 16 11 chrX 108114548 108115167 -58535129 - Lx2 LINE L1 0 6997 6376 1 1409 1513 143 0 8 chrX 108115196 108115436 -58534860 + L1_Mm LINE L1 5360 5597 -286 1 1409 530 129 16 2 chrX 108115484 108115581 -58534715 + RLTR31_Mm LTR ERVK 205 310 -243 1 1409 3358 194 49 28 chrX 108115592 108116406 -58533890 + RMER3D-int LTR ERVK 2012 2842 0 1 1409 1984 171 55 12 chrX 108116406 108116809 -58533487 + RLTR31_Mm LTR ERVK 1 420 -141 1 1409 4557 162 40 54 chrX 108116824 108116947 -58533349 - L1_Mur3 LINE L1 -3627 2250 2142 1 1409 383 0 0 21 chrX 108116947 108116995 -58533301 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 1 1409 4557 162 40 54 chrX 108116995 108117082 -58533214 - L1_Mur3 LINE L1 -3736 2141 2061 1 1409 612 40 0 0 chrX 108117082 108117157 -58533139 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 1409 4557 183 33 45 chrX 108117157 108118260 -58532036 - L1_Mur3 LINE L1 -3817 2060 889 1 1409 2220 227 30 11 chrX 108118403 108118871 -58531425 + Lx6 LINE L1 6983 7459 -1 1 1409 671 308 50 43 chrX 108119358 108119594 -58530702 - L1_Mur3 LINE L1 -1206 4674 4417 1 1409 1152 82 0 0 chrX 108119594 108119741 -58530555 - B1_Mus1 SINE Alu 0 148 2 1 1409 671 308 50 43 chrX 108119741 108120148 -58530148 - L1_Mur3 LINE L1 -1464 4416 4028 1 1409 2442 316 29 35 chrX 108120157 108121025 -58529271 + Lx8 LINE L1 6353 7215 -258 1 1409 234 62 0 0 chrX 108121126 108121158 -58529138 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 1 1409 22 0 0 0 chrX 108122060 108122082 -58528214 + AT_rich Low_complexity Low_complexity 1 22 0 1 1409 251 330 60 70 chrX 108122315 108122436 -58527860 - Lx8 LINE L1 -7 7466 7350 1 1409 429 20 0 0 chrX 108122436 108122486 -58527810 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1409 251 330 60 70 chrX 108122486 108122579 -58527717 - Lx8 LINE L1 -124 7349 7254 1 1409 2721 284 37 23 chrX 108122658 108123543 -58526753 - Lx8 LINE L1 -480 6993 6096 1 1409 367 164 0 56 chrX 108123659 108123730 -58526566 + MTD LTR MaLR 13 79 -340 1 1409 570 15 0 0 chrX 108123744 108123811 -58526485 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 1409 447 68 0 0 chrX 108123811 108123869 -58526427 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 1409 10915 191 42 42 chrX 108123880 108126549 -58523747 - L1_Mur2 LINE L1 -59 5818 3150 1 1409 1100 276 100 18 chrX 108126547 108127105 -58523191 - L1_Rod LINE L1 -3622 2225 1622 1 1409 306 0 0 0 chrX 108127110 108127144 -58523152 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 1409 621 27 0 0 chrX 108127144 108127218 -58523078 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 1409 12889 144 20 118 chrX 108127254 108127717 -58522579 + L1_Mm LINE L1 2424 2876 -3007 1 1409 241 298 95 60 chrX 108127717 108127819 -58522477 + RLTR25A LTR ERVK 360 468 -635 1 1409 758 99 31 55 chrX 108127819 108127947 -58522349 + B1_Mm SINE Alu 2 126 -21 1 1409 12889 144 20 118 chrX 108127947 108130187 -58520109 + L1_Mm LINE L1 2877 5069 -814 1 1409 715 122 29 0 chrX 108130187 108130326 -58519970 + L1_Mus3 LINE L1 6495 6637 -1 1 1409 2473 97 19 19 chrX 108130336 108130705 -58519591 + L1Md_F2 LINE L1 6212 6580 -2 1 1409 1645 212 16 0 chrX 108130722 108131033 -58519263 - ORR1D1 LTR MaLR -58 316 1 1 1409 1104 263 39 6 chrX 108131033 108131659 -58518637 - L1_Rod LINE L1 -4242 1605 958 1 1409 204 167 62 0 chrX 108131664 108131712 -58518584 + T-rich Low_complexity Low_complexity 3 53 0 1 1409 304 252 8 8 chrX 108132092 108132192 -58518104 - L1_Mur3 LINE L1 -2384 3759 3655 1 1409 1195 69 6 0 chrX 108132273 108132433 -58517863 + L1_Mus2 LINE L1 6405 6565 -1 1 1409 674 325 78 25 chrX 108132876 108133514 -58516782 + L1_Mur3 LINE L1 1244 1915 -3965 1 1409 378 363 133 61 chrX 108133516 108133989 -58516307 - MER21B LTR ERV1 -144 719 213 1 1409 196 236 18 18 chrX 108134018 108134074 -58516222 - L2 LINE L2 -1295 2124 2069 1 1409 500 35 0 0 chrX 108134088 108134145 -58516151 + L1Md_A LINE L1 5530 5586 -297 1 176 8555 27 0 0 chrX 108134145 108135141 -58515155 + L1Md_A LINE L1 5587 6582 0 1 1410 182 321 100 21 chrX 108135298 108135438 -58514858 - L2 LINE L2 -1362 2057 1907 1 1410 1309 90 17 0 chrX 108135471 108135649 -58514647 + B2_Mm2 SINE B2 1 181 -14 1 1410 3095 34 0 76 chrX 108135650 108136070 -58514226 - L1Md_A LINE L1 -5 6577 6190 1 1410 348 24 0 0 chrX 108136183 108136224 -58514072 + (CTG)n Simple_repeat Simple_repeat 1 41 0 1 1410 242 354 86 30 chrX 108136389 108136587 -58513709 - L2 LINE L2 -1897 1522 1314 1 1410 976 204 43 14 chrX 108136652 108136859 -58513437 + MT2A LTR ERVL 7 219 -314 1 1410 536 235 209 0 chrX 108136917 108137070 -58513226 + MT2A LTR ERVL 349 533 0 1 1410 1008 221 50 60 chrX 108137118 108137436 -58512860 - Lx9 LINE L1 -149 7495 7181 1 1410 237 191 24 0 chrX 108137440 108137482 -58512814 + Lx9 LINE L1 7081 7123 -521 1 1410 528 304 21 26 chrX 108137762 108137951 -58512345 - MER5A DNA MER1_type -1 188 1 1 1410 240 225 101 0 chrX 108138570 108138659 -58511637 - L1MA8 LINE L1 -4 6287 6190 1 1410 1000 85 0 0 chrX 108139092 108139221 -58511075 - B1_Mm SINE Alu -17 130 2 1 1410 358 354 31 0 chrX 108139525 108139655 -58510641 + ID_B1 SINE B4 84 217 -7 1 1410 26 50 0 0 chrX 108139727 108139767 -58510529 + AT_rich Low_complexity Low_complexity 1 40 0 1 1410 875 288 48 94 chrX 108140081 108140186 -58510110 - ORR1D2 LTR MaLR -2 368 262 1 1410 716 196 7 45 chrX 108140186 108140341 -58509955 + B1_Mur2 SINE Alu 1 149 0 1 1410 875 288 48 94 chrX 108140341 108140565 -58509731 - ORR1D2 LTR MaLR -109 261 54 1 1410 35447 34 0 0 chrX 108140610 108146242 -58504054 + L1Md_T LINE L1 2 5589 -297 1 1410 8888 6 3 0 chrX 108146242 108147235 -58503061 + L1Md_T LINE L1 5590 6585 0 1 1410 210 37 0 0 chrX 108147238 108147265 -58503031 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1410 10049 11 11 0 chrX 108147265 108148413 -58501883 + L1Md_A LINE L1 4427 5586 -297 1 1410 7838 15 74 0 chrX 108148413 108149373 -58500923 + L1Md_A LINE L1 5587 6582 0 1 1410 226 384 117 26 chrX 108149536 108149766 -58500530 + MER21B LTR ERV1 433 683 -180 1 1410 557 316 178 25 chrX 108150862 108151267 -58499029 - MLT1C LTR MaLR 0 467 1 1 1410 648 290 98 15 chrX 108151522 108151716 -58498580 - Lx8 LINE L1 -1088 6385 6175 1 1410 480 35 0 0 chrX 108151716 108151774 -58498522 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 1410 648 290 98 15 chrX 108151774 108151845 -58498451 - Lx8 LINE L1 -1299 6174 6098 1 1410 789 296 105 7 chrX 108151964 108152240 -58498056 + Lx8 LINE L1 7037 7339 -134 1 1410 462 275 100 5 chrX 108152247 108152437 -58497859 + Lx7 LINE L1 6886 7093 -603 1 1410 645 187 22 7 chrX 108152439 108152574 -58497722 + L1_Mur2 LINE L1 4638 4774 -1103 1 1410 652 224 35 55 chrX 108152574 108152850 -58497446 - RLTR25A LTR ERVK 0 1028 700 1 1410 574 237 183 40 chrX 108152710 108152940 -58497356 - ORR1D2-int LTR MaLR -851 1112 773 1 1410 3292 83 9 4 chrX 108152940 108153399 -58496897 - Lx LINE L1 -586 6068 5608 1 1410 3629 130 2 14 chrX 108153399 108153954 -58496342 + Lx LINE L1 6107 6654 0 1 1410 546 222 12 0 chrX 108153955 108154122 -58496174 - ORR1D2-int LTR MaLR -1083 880 712 1 1410 613 149 0 116 chrX 108154077 108154198 -58496098 - MT2B LTR ERVL -314 287 181 1 1410 1488 166 12 0 chrX 108154200 108154441 -58495855 + Lx4B LINE L1 6371 6614 -444 1 1410 1414 79 20 0 chrX 108154441 108154643 -58495653 + L1_Mus2 LINE L1 6361 6566 0 1 1410 21 0 0 0 chrX 108154645 108154666 -58495630 + AT_rich Low_complexity Low_complexity 1 21 0 1 1410 2154 168 30 18 chrX 108154666 108155103 -58495193 + Lx4B LINE L1 6612 7053 -5 1 1410 483 259 143 4 chrX 108155112 108155214 -58495082 + L1MB1 LINE L1 5620 5758 -431 1 1410 952 59 7 7 chrX 108155214 108155351 -58494945 + (TAGA)n Simple_repeat Simple_repeat 4 140 0 1 1410 483 249 162 5 chrX 108155351 108155486 -58494810 + L1MB1 LINE L1 5759 5927 -262 1 1410 24 32 0 0 chrX 108155732 108155763 -58494533 + AT_rich Low_complexity Low_complexity 1 31 0 1 1410 22 0 0 0 chrX 108155895 108155917 -58494379 + AT_rich Low_complexity Low_complexity 1 22 0 1 1410 32 26 0 0 chrX 108155928 108155967 -58494329 + AT_rich Low_complexity Low_complexity 1 39 0 1 1410 327 309 65 26 chrX 108156057 108156210 -58494086 + MIRc SINE MIR 50 208 -60 1 1410 459 0 0 0 chrX 108156739 108156790 -58493506 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1410 207 0 0 0 chrX 108157131 108157154 -58493142 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1410 393 326 159 6 chrX 108157758 108157940 -58492356 + MER58A DNA MER1_type 3 212 -12 1 1410 287 265 157 0 chrX 108159329 108159412 -58490884 + MIR3 SINE MIR 81 176 -32 1 1410 194 356 46 0 chrX 108159735 108159822 -58490474 + MIR SINE MIR 172 262 0 1 1410 270 0 0 0 chrX 108159862 108159892 -58490404 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1410 2925 106 30 61 chrX 108160232 108160726 -58489570 + Lx LINE L1 6176 6654 0 1 1410 23 78 0 0 chrX 108160876 108160927 -58489369 + AT_rich Low_complexity Low_complexity 1 51 0 1 1410 21 71 0 0 chrX 108161008 108161050 -58489246 + AT_rich Low_complexity Low_complexity 1 42 0 1 1410 1415 77 5 15 chrX 108161941 108162138 -58488158 + B2_Mm2 SINE B2 1 195 0 1 1410 949 153 16 37 chrX 108162161 108162351 -58487945 + Lx3B LINE L1 6781 6966 -7 1 1410 26 50 0 0 chrX 108162356 108162396 -58487900 + AT_rich Low_complexity Low_complexity 1 40 0 1 1410 246 62 0 0 chrX 108162557 108162589 -58487707 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1410 244 299 116 111 chrX 108163604 108163811 -58486485 - B4A SINE B4 -2 290 83 1 1410 1831 201 41 0 chrX 108163830 108164198 -58486098 - Lx5 LINE L1 -1 7049 6667 1 1410 728 120 112 0 chrX 108164193 108164318 -58485978 + Lx5 LINE L1 5745 5883 -1167 1 1410 228 250 0 0 chrX 108164319 108164363 -58485933 - B4 SINE B4 -205 87 44 1 1410 4677 64 2 2 chrX 108164772 108165370 -58484926 + L1_Mus2 LINE L1 5969 6566 0 1 1410 22 35 0 0 chrX 108167069 108167098 -58483198 + AT_rich Low_complexity Low_complexity 1 29 0 1 1410 4704 88 61 15 chrX 108167468 108168219 -58482077 + Lx3A LINE L1 6109 6894 -87 1 1410 1463 257 14 9 chrX 108168223 108168655 -58481641 - Lx9 LINE L1 -164 7480 7047 1 1410 1528 76 53 0 chrX 108168676 108168901 -58481395 - Lx2 LINE L1 -434 6563 6327 1 1410 4565 118 69 1 chrX 108168898 108168926 -58481370 - L1VL4 LINE L1 -5460 842 815 1 1410 183 42 0 0 chrX 108168926 108168950 -58481346 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 1410 4565 118 69 1 chrX 108168950 108169674 -58480622 - L1VL4 LINE L1 -5488 814 40 1 1410 375 319 24 43 chrX 108169703 108169867 -58480429 - L1M2 LINE L1 -1959 4184 4024 1 1410 2247 87 23 59 chrX 108169914 108170268 -58480028 - L1_Mus2 LINE L1 0 6566 6226 1 1410 520 220 24 30 chrX 108170276 108170433 -58479863 - L1Md_F LINE L1 -5813 806 527 2 1410 314 290 51 34 chrX 108170462 108170758 -58479538 - L1MB4 LINE L1 -4910 1697 1397 2 1410 274 292 73 0 chrX 108170819 108170956 -58479340 + Lx5 LINE L1 5736 5882 -1168 2 1410 444 37 0 0 chrX 108171370 108171424 -58478872 + (TA)n Simple_repeat Simple_repeat 1 54 0 2 1410 273 253 58 0 chrX 108171619 108171706 -58478590 - L1MB4 LINE L1 -5382 1263 1172 2 1410 14118 61 1 5 chrX 108171736 108173639 -58476657 + L1_Mm LINE L1 3966 5859 -24 2 1410 3950 63 4 0 chrX 108173639 108174147 -58476149 + L1Md_F2 LINE L1 6067 6576 -6 2 1410 2468 170 20 25 chrX 108175108 108175593 -58474703 + Lx4A LINE L1 6525 7011 -47 2 1410 28 29 0 0 chrX 108175606 108175641 -58474655 + AT_rich Low_complexity Low_complexity 1 35 0 2 1410 1069 250 60 0 chrX 108175701 108175985 -58474311 - Lx8 LINE L1 -978 6495 6195 2 1410 746 146 0 8 chrX 108177208 108177339 -58472957 + Lx4B LINE L1 6606 6735 -323 2 1410 883 183 37 16 chrX 108177354 108177543 -58472753 + Lx4B LINE L1 6862 7054 -4 2 1410 612 115 44 0 chrX 108177553 108177666 -58472630 + L1_Mus3 LINE L1 6515 6632 -6 2 1410 4184 150 13 0 chrX 108178702 108179456 -58470840 + L1_Mur2 LINE L1 4323 5086 -791 2 1410 5314 164 41 19 chrX 108179456 108180441 -58469855 + Lx4B LINE L1 6053 7058 0 2 1410 216 0 0 0 chrX 108181479 108181503 -58468793 + (ATTG)n Simple_repeat Simple_repeat 3 26 0 2 1410 22 0 0 0 chrX 108181651 108181673 -58468623 + AT_rich Low_complexity Low_complexity 1 22 0 2 1410 609 250 30 18 chrX 108181899 108182066 -58468230 - Lx5 LINE L1 -398 6652 6484 2 1410 2634 229 50 11 chrX 108182068 108182841 -58467455 - Lx5 LINE L1 -687 6363 5540 2 1410 634 264 101 17 chrX 108182909 108183206 -58467090 + Lx6 LINE L1 7113 7434 -26 2 1410 1228 252 109 15 chrX 108183228 108183566 -58466730 + ORR1D1 LTR MaLR 1 370 -4 2 1410 279 279 100 55 chrX 108183601 108183711 -58466585 + MIR SINE MIR 26 140 -122 2 1410 1707 155 154 15 chrX 108184342 108184872 -58465424 + L1VL4 LINE L1 499 1111 -2448 2 1410 33542 57 1 18 chrX 108184873 108190139 -58460157 + L1Md_A LINE L1 415 5586 -297 2 1410 8202 40 2 0 chrX 108190139 108191132 -58459164 + L1Md_A LINE L1 5587 6581 -1 2 1410 7705 41 1 1 chrX 108191154 108192269 -58458027 - L1Md_F2 LINE L1 -1 6581 5468 2 1410 3402 30 0 12 chrX 108192464 108192877 -58457419 + L1Md_F3 LINE L1 6175 6582 -2 2 1410 189 0 0 0 chrX 108192907 108192928 -58457368 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2 1410 225 276 11 22 chrX 108193018 108193107 -58457189 - LTR65 LTR ERV1 -112 557 470 2 1410 2428 88 97 24 chrX 108193145 108193518 -58456778 - MTB LTR MaLR 0 400 1 2 1410 413 253 10 10 chrX 108193521 108193612 -58456684 - B4A SINE B4 0 292 202 2 1410 458 185 0 0 chrX 108193612 108193693 -58456603 + MTC LTR MaLR 3 83 -338 2 1410 978 340 26 16 chrX 108193696 108194192 -58456104 + L1_Mur3 LINE L1 62 562 -7166 2 1410 1297 196 118 3 chrX 108194186 108194560 -58455736 + L1_Mur3 LINE L1 860 1276 -6452 2 1410 2698 175 26 0 chrX 108194599 108195182 -58455114 + L1_Mur3 LINE L1 1446 2043 -3837 2 1410 2015 183 24 13 chrX 108195175 108195639 -58454657 + L1_Mur3 LINE L1 4510 4978 -902 2 1410 1024 226 18 9 chrX 108195640 108195863 -58454433 + MTC LTR MaLR 197 421 0 2 1410 874 312 162 24 chrX 108195953 108196379 -58453917 + MLT1E2 LTR MaLR 134 618 -9 2 1410 25 31 0 0 chrX 108196433 108196465 -58453831 + AT_rich Low_complexity Low_complexity 1 32 0 2 1410 192 238 56 56 chrX 108196891 108196980 -58453316 + MIRc SINE MIR 150 238 -30 2 1410 7146 77 0 3 chrX 108198049 108198986 -58451310 + L1Md_F2 LINE L1 5643 6576 -6 2 1410 358 214 67 11 chrX 108199044 108199134 -58451162 + Lx9 LINE L1 7074 7168 -476 2 1410 2669 34 158 0 chrX 108199836 108200191 -58450105 - IAPLTR2a LTR ERVK 0 411 1 2 1410 5907 69 13 12 chrX 108200193 108201019 -58449277 - IAPEz-int LTR ERVK -2 6479 5653 2 1410 10624 72 39 76 chrX 108201020 108202786 -58447510 - IAPEz-int LTR ERVK -4786 1695 3 2 1410 3009 33 56 5 chrX 108202788 108203179 -58447117 - IAPLTR2a LTR ERVK 0 411 1 2 1410 186 143 0 0 chrX 108203362 108203397 -58446899 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1410 22 0 0 0 chrX 108203781 108203803 -58446493 + AT_rich Low_complexity Low_complexity 1 22 0 2 1410 7129 106 41 4 chrX 108203851 108204914 -58445382 + Lx3_Mus LINE L1 5899 7001 -8 2 1410 25 51 0 0 chrX 108204997 108205036 -58445260 + AT_rich Low_complexity Low_complexity 1 39 0 2 1410 21 57 0 0 chrX 108205088 108205123 -58445173 + AT_rich Low_complexity Low_complexity 1 35 0 2 1410 2572 73 0 31 chrX 108205138 108205493 -58444803 - L1Md_F2 LINE L1 -14 6568 6225 2 1410 21 0 0 0 chrX 108205500 108205521 -58444775 + AT_rich Low_complexity Low_complexity 1 21 0 2 1410 1014 304 35 14 chrX 108205597 108206031 -58444265 + Lx7 LINE L1 6771 7213 -483 2 1410 303 28 0 0 chrX 108206049 108206085 -58444211 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 2 1410 30 59 0 0 chrX 108206256 108206307 -58443989 + AT_rich Low_complexity Low_complexity 1 51 0 2 1410 477 0 0 0 chrX 108206865 108206918 -58443378 + (GGAA)n Simple_repeat Simple_repeat 2 54 0 2 1410 459 0 0 0 chrX 108206929 108206980 -58443316 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 1410 415 306 0 35 chrX 108206980 108207095 -58443201 - B3A SINE B2 -86 112 2 2 1410 231 241 72 27 chrX 108207123 108207234 -58443062 - Lx9 LINE L1 -16 7628 7513 2 1410 461 325 83 12 chrX 108207312 108207732 -58442564 - L1MB7 LINE L1 -92 6092 5643 2 1410 348 94 0 0 chrX 108207800 108207853 -58442443 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 1410 1004 352 43 18 chrX 108207902 108208553 -58441743 + Lx8 LINE L1 6728 7394 -79 2 1410 306 323 29 52 chrX 108208582 108208755 -58441541 + L1MB8 LINE L1 5961 6129 -49 2 1410 341 320 52 12 chrX 108208812 108209062 -58441234 - L1M3 LINE L1 -1926 4214 3955 2 1410 34705 56 8 3 chrX 108209276 108215555 -58434741 - L1Md_F2 LINE L1 0 6585 176 2 1410 643 232 51 64 chrX 108215555 108215678 -58434618 + ORR1C1 LTR MaLR 147 269 -109 2 1410 4654 128 72 1 chrX 108215678 108216429 -58433867 - L1_Mus4 LINE L1 0 6636 5833 2 1410 870 28 0 18 chrX 108216429 108216540 -58433756 + ORR1A1 LTR MaLR 238 346 0 2 1410 22535 159 21 8 chrX 108216540 108218264 -58432032 - L1_Mus4 LINE L1 -231 5652 3859 2 1410 311 0 26 0 chrX 108218264 108218303 -58431993 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 2 1410 22535 159 19 8 chrX 108218303 108221486 -58428810 - L1_Mus4 LINE L1 -2025 3858 688 2 1410 5530 80 9 13 chrX 108221503 108221588 -58428708 - L1_Mur1 LINE L1 -1597 4289 4206 2 1410 2803 97 23 0 chrX 108221588 108221979 -58428317 - MTB LTR MaLR 0 400 1 2 1410 5810 80 9 13 chrX 108221979 108222750 -58427546 - L1_Mur1 LINE L1 -1681 4205 3436 2 1410 270 0 0 0 chrX 108223039 108223069 -58427227 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1410 377 155 164 10 chrX 108223078 108223182 -58427114 + Lx9 LINE L1 7520 7639 -5 2 1410 293 312 119 8 chrX 108223216 108223342 -58426954 + ORR1D1 LTR MaLR 139 278 -96 2 1410 379 286 72 42 chrX 108223342 108223579 -58426717 - L1M2 LINE L1 -1304 4836 4593 2 1410 508 31 0 0 chrX 108223602 108223667 -58426629 + L1_Mus2 LINE L1 6502 6566 0 2 1410 1155 302 81 40 chrX 108225149 108225783 -58424513 - L1M2 LINE L1 -1538 4605 3917 2 1410 791 89 0 0 chrX 108225783 108225907 -58424389 + L1Md_F2 LINE L1 6456 6579 -3 2 1410 1155 302 81 40 chrX 108225907 108226052 -58424244 - L1M2 LINE L1 -2227 3916 3763 2 1410 4606 26 0 0 chrX 108226052 108226587 -58423709 - L1Md_A LINE L1 -1 6581 6047 2 1410 1155 302 81 40 chrX 108226587 108226961 -58423335 - L1M2 LINE L1 -2381 3762 3414 2 1410 1803 123 3 39 chrX 108226961 108227273 -58423023 + Lx2 LINE L1 6696 6996 -1 2 1410 1155 302 81 40 chrX 108227273 108227432 -58422864 - L1M2 LINE L1 -2730 3413 3239 2 1410 5070 223 83 56 chrX 108227461 108228772 -58421524 + Lx6 LINE L1 5972 7318 -142 2 1410 229 235 122 19 chrX 108228806 108228962 -58421334 - L1M2 LINE L1 -2924 3219 3048 2 1410 1383 285 92 22 chrX 108229036 108229865 -58420431 + L1MA6 LINE L1 4654 5562 -738 2 1410 1268 64 0 6 chrX 108229865 108230038 -58420258 - L1Md_F2 LINE L1 -12 6570 6399 2 1410 1383 287 77 29 chrX 108230038 108230596 -58419700 + L1MA6 LINE L1 5563 6130 -170 2 1410 558 0 0 0 chrX 108230919 108230981 -58419315 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 1410 1025 282 97 35 chrX 108231213 108231555 -58418741 - ORR1D2 LTR MaLR 0 370 8 2 1410 209 108 27 0 chrX 108231559 108231596 -58418700 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 1410 1809 285 41 87 chrX 108231875 108232358 -58417938 - Lx8 LINE L1 -262 7211 6751 2 1410 320 0 25 0 chrX 108232358 108232398 -58417898 + (TAAAA)n Simple_repeat Simple_repeat 2 42 0 2 1410 1809 285 41 87 chrX 108232398 108232737 -58417559 - Lx8 LINE L1 -723 6750 6433 2 1410 5175 60 0 6 chrX 108232737 108233403 -58416893 - L1Md_F2 LINE L1 -12 6570 5909 2 1410 1809 285 41 87 chrX 108233403 108233432 -58416864 - Lx8 LINE L1 -1041 6432 6399 2 1410 355 289 0 0 chrX 108233437 108233527 -58416769 - B1F SINE Alu -22 98 9 2 1410 924 211 11 11 chrX 108233596 108233778 -58416518 - ORR1A3 LTR MaLR -192 182 1 2 1410 236 77 26 0 chrX 108233809 108233848 -58416448 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 1410 240 208 19 0 chrX 108233849 108233902 -58416394 + L1M2 LINE L1 2971 3024 -3119 2 1410 3894 68 89 27 chrX 108233910 108234470 -58415826 + L1_Mus1 LINE L1 5973 6567 0 2 1410 977 165 6 0 chrX 108234594 108234758 -58415538 + ORR1A3 LTR MaLR 1 165 -161 2 1410 950 126 31 0 chrX 108234750 108234909 -58415387 - ORR1A3-int LTR MaLR -1798 165 2 2 1410 972 133 0 0 chrX 108234910 108235060 -58415236 - ORR1A3 LTR MaLR 0 326 177 2 1410 277 341 0 0 chrX 108235226 108235355 -58414941 + T-rich Low_complexity Low_complexity 1 129 0 2 1410 365 321 99 0 chrX 108235358 108235489 -58414807 - B1F2 SINE Alu -5 144 1 2 1410 719 286 92 48 chrX 108235502 108235983 -58414313 + L1MA4 LINE L1 5439 5940 -360 2 1410 2152 254 78 42 chrX 108236203 108236289 -58414007 + Tigger7 DNA MER2_type 791 879 -1612 2 1410 1290 296 73 24 chrX 108236289 108236795 -58413501 + MT2A LTR ERVL 1 531 -2 2 1410 2152 254 78 42 chrX 108236795 108237426 -58412870 + Tigger7 DNA MER2_type 880 1534 -957 2 1410 306 152 0 0 chrX 108237435 108237494 -58412802 + (ATG)n Simple_repeat Simple_repeat 2 60 0 2 1410 341 86 17 0 chrX 108237530 108237588 -58412708 + (TAA)n Simple_repeat Simple_repeat 1 59 0 2 1410 234 232 43 14 chrX 108237595 108237735 -58412561 + (TATAA)n Simple_repeat Simple_repeat 3 146 0 2 1410 240 35 0 0 chrX 108237759 108237788 -58412508 + (TTA)n Simple_repeat Simple_repeat 1 29 0 2 1410 800 333 124 17 chrX 108237800 108238276 -58412020 + Tigger7 DNA MER2_type 1574 2100 -391 2 1410 396 0 0 0 chrX 108238375 108238419 -58411877 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 1410 291 28 0 0 chrX 108238419 108238454 -58411842 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1410 205 211 0 0 chrX 108238454 108238492 -58411804 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 1410 669 142 0 0 chrX 108238492 108238605 -58411691 + (TG)n Simple_repeat Simple_repeat 2 114 0 2 1410 23 68 0 0 chrX 108238759 108238803 -58411493 + AT_rich Low_complexity Low_complexity 1 44 0 2 1410 39868 23 0 6 chrX 108239019 108245207 -58405089 - L1Md_T LINE L1 0 6582 438 2 1410 496 325 0 133 chrX 108245256 108245330 -58404966 + RSINE1 SINE B4 3 76 -89 2 1410 6696 48 1 11 chrX 108245330 108246170 -58404126 + L1Md_F2 LINE L1 5738 6569 -13 3 1410 496 325 0 133 chrX 108246170 108246276 -58404020 + RSINE1 SINE B4 77 159 -6 2 1410 292 361 0 16 chrX 108247835 108247956 -58402340 + MIRc SINE MIR 95 213 -55 3 1410 387 0 0 0 chrX 108248347 108248390 -58401906 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1410 28 29 0 0 chrX 108249322 108249357 -58400939 + AT_rich Low_complexity Low_complexity 1 35 0 3 1410 832 187 6 12 chrX 108249587 108249760 -58400536 + Lx4A LINE L1 6887 7058 0 3 1410 1549 339 49 20 chrX 108249779 108250528 -58399768 + Lx8 LINE L1 6423 7193 -280 3 1410 422 79 0 16 chrX 108250528 108250592 -58399704 + (TTTTG)n Simple_repeat Simple_repeat 1 63 0 3 1410 1181 34 7 7 chrX 108250746 108250893 -58399403 + B1_Mus1 SINE Alu 2 148 0 3 1410 209 0 0 89 chrX 108250897 108250942 -58399354 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 3 1410 200 93 70 0 chrX 108251149 108251192 -58399104 + (CAA)n Simple_repeat Simple_repeat 2 47 0 3 1410 414 0 0 0 chrX 108251346 108251392 -58398904 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1410 21 0 0 0 chrX 108251540 108251561 -58398735 + AT_rich Low_complexity Low_complexity 1 21 0 3 1410 2031 173 74 37 chrX 108251561 108251994 -58398302 - Lx4B LINE L1 -6 7052 6604 3 1410 1216 147 0 0 chrX 108251992 108252189 -58398107 - L1_Mur2 LINE L1 -517 5360 5164 3 1410 337 236 88 16 chrX 108252382 108252507 -58397789 - L1MA9 LINE L1 -230 5938 5805 3 1410 2294 269 72 54 chrX 108252508 108252838 -58397458 - L1_Mur3 LINE L1 -463 5417 5092 3 1410 1671 119 0 32 chrX 108252838 108253115 -58397181 - Lx LINE L1 -4 6650 6383 3 1410 2294 269 72 54 chrX 108253115 108253839 -58396457 - L1_Mur3 LINE L1 -789 5091 4345 3 1410 414 173 37 0 chrX 108253841 108253922 -58396374 + Lx9 LINE L1 7368 7451 -193 3 1410 297 0 0 0 chrX 108253933 108253966 -58396330 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1410 192 77 0 0 chrX 108253966 108253991 -58396305 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 1410 448 173 36 0 chrX 108254012 108254122 -58396174 + Lx9 LINE L1 7531 7644 0 3 1410 336 294 33 76 chrX 108254202 108254386 -58395910 + Lx8 LINE L1 6892 7067 -406 3 1410 835 242 95 127 chrX 108254399 108254873 -58395423 - RLTR40 LTR ERVK -10 807 349 3 1410 3821 113 55 0 chrX 108254873 108255441 -58394855 - Lx LINE L1 -30 6624 6026 3 1410 2996 76 0 39 chrX 108255447 108255885 -58394411 - BGLII LTR ERVK 0 421 1 3 1410 15104 129 97 24 chrX 108255885 108260738 -58389558 - Lx2 LINE L1 -726 6271 542 3 1410 1330 248 50 34 chrX 108260741 108261125 -58389171 - RLTR40 LTR ERVK -423 394 5 3 1410 431 277 91 14 chrX 108261129 108261272 -58389024 + Lx9 LINE L1 7202 7355 -289 3 1410 24 0 0 0 chrX 108261410 108261434 -58388862 + AT_rich Low_complexity Low_complexity 1 24 0 3 1410 579 255 85 19 chrX 108261486 108261850 -58388446 - Lx7 LINE L1 -4 7692 7305 3 1410 248 0 31 0 chrX 108262301 108262333 -58387963 + (AAATG)n Simple_repeat Simple_repeat 5 37 0 3 1410 2432 198 139 10 chrX 108262361 108262958 -58387338 + RMER6C LTR ERVK 1 674 -16 3 1410 706 224 0 13 chrX 108262970 108263119 -58387177 - B1_Mur2 SINE Alu -1 148 2 3 1410 3299 107 2 2 chrX 108263147 108263607 -58386689 - Lx3C LINE L1 -334 6642 6183 3 1410 2002 135 22 6 chrX 108263607 108263927 -58386369 + Lx3C LINE L1 6649 6973 -3 3 1410 24 0 0 0 chrX 108263942 108263966 -58386330 + AT_rich Low_complexity Low_complexity 1 24 0 3 1410 366 23 0 0 chrX 108264468 108264511 -58385785 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1410 306 0 0 0 chrX 108264511 108264544 -58385752 + (GA)n Simple_repeat Simple_repeat 2 35 0 3 1410 2416 135 48 24 chrX 108264864 108265319 -58384977 - RMER17B LTR ERVK -4 954 489 3 176 5513 123 0 93 chrX 108265319 108266025 -58384271 + L1VL1 LINE L1 425 1116 -5522 3 1411 2240 50 0 7 chrX 108266025 108266307 -58383989 + L1Md_F2 LINE L1 6303 6582 0 3 1411 19938 121 5 17 chrX 108266307 108268464 -58381832 + L1VL1 LINE L1 1117 3181 -2702 3 1411 345 24 0 0 chrX 108268464 108268506 -58381790 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 3 1411 19938 121 6 11 chrX 108268506 108269770 -58380526 + L1VL1 LINE L1 3182 4442 -1441 3 1411 6807 64 1 4 chrX 108269770 108270839 -58379457 + L1Md_F LINE L1 404 1473 -4410 3 1411 476 244 95 9 chrX 108270838 108270954 -58379342 + Lx8 LINE L1 7075 7200 -273 3 1411 678 256 101 14 chrX 108271090 108271308 -58378988 + Lx8 LINE L1 7208 7444 -29 3 1411 10106 101 6 10 chrX 108271646 108273864 -58376432 + L1_Mus3 LINE L1 4427 6635 -3 3 1411 1623 263 60 42 chrX 108273874 108274422 -58375874 - RLTR1 LTR ERV1 0 624 67 3 1411 3412 110 6 0 chrX 108274442 108274950 -58375346 - RMER17B LTR ERVK -455 503 1 3 1411 2453 122 29 14 chrX 108274957 108275373 -58374923 - BGLII_Mus LTR ERVK 0 422 1 3 1411 557 316 35 0 chrX 108276543 108276717 -58373579 + B3A SINE B2 1 180 -18 3 1411 50 65 0 0 chrX 108276724 108276816 -58373480 + AT_rich Low_complexity Low_complexity 1 92 0 3 1411 16970 173 22 37 chrX 108278473 108281166 -58369130 + Lx2 LINE L1 2405 5025 -858 3 1411 3044 23 0 0 chrX 108281166 108281512 -58368784 - ORR1A0 LTR MaLR 0 346 1 3 1411 16970 154 25 20 chrX 108281512 108282817 -58367479 + Lx2 LINE L1 5026 6367 -630 3 1411 2720 101 31 17 chrX 108282817 108283231 -58367065 + BGLII_Mus LTR ERVK 3 422 0 3 1411 8147 141 27 9 chrX 108283231 108283854 -58366442 + Lx2 LINE L1 6368 6994 -3 3 1411 1449 117 22 4 chrX 108283953 108284184 -58366112 - Lx LINE L1 -6 6648 6414 3 1411 2485 177 18 0 chrX 108284184 108284642 -58365654 + L1_Mm LINE L1 4734 5199 -684 3 1411 1448 49 32 0 chrX 108285184 108285369 -58364927 + B2_Mm1t SINE B2 2 192 -1 3 1411 573 15 0 0 chrX 108286170 108286236 -58364060 + (GA)n Simple_repeat Simple_repeat 2 67 0 3 1411 2829 59 64 3 chrX 108286259 108286636 -58363660 - MTB LTR MaLR 0 400 1 3 1411 588 89 0 0 chrX 108286636 108286726 -58363570 - MTB-int LTR MaLR 0 1098 1009 3 1411 6482 42 12 6 chrX 108286887 108287702 -58362594 - L1Md_F2 LINE L1 -2 6580 5761 3 1411 839 101 0 2 chrX 108287705 108287828 -58362468 - L1_Mus1 LINE L1 -92 6475 6371 3 1411 392 0 0 20 chrX 108287873 108287922 -58362374 + (TCTG)n Simple_repeat Simple_repeat 1 48 0 3 1411 322 100 0 0 chrX 108288295 108288345 -58361951 + MMVL30-int LTR ERV1 772 821 -2877 3 1411 1014 239 29 0 chrX 108288605 108288810 -58361486 + B3 SINE B2 1 211 -5 3 1411 1018 84 0 0 chrX 108288902 108289045 -58361251 + L1_Mus2 LINE L1 6416 6558 -8 3 1411 1525 41 10 0 chrX 108289044 108289240 -58361056 + L1Md_F3 LINE L1 6372 6569 -15 3 1411 6527 11 1 0 chrX 108289557 108290692 -58359604 + L1Md_A LINE L1 5148 6283 -299 3 1411 2246 8 0 0 chrX 108290689 108290953 -58359343 + L1_Mm LINE L1 2965 3228 -2655 3 1411 2661 13 0 0 chrX 108290954 108291258 -58359038 + L1Md_A LINE L1 6279 6582 0 3 1411 941 280 91 40 chrX 108291529 108291924 -58358372 + MTD LTR MaLR 1 415 -4 3 1411 934 299 107 25 chrX 108293121 108293434 -58356862 + L1M2 LINE L1 2783 3118 -3025 3 1411 1159 62 0 0 chrX 108293434 108293578 -58356718 + B1_Mus2 SINE Alu 2 145 -2 3 1411 934 299 107 25 chrX 108293578 108294183 -58356113 + L1M2 LINE L1 3119 3776 -2367 3 1411 38391 6 0 0 chrX 108294195 108299607 -58350689 + L1Md_A LINE L1 175 5586 -297 3 1411 9012 3 0 0 chrX 108299607 108300603 -58349693 + L1Md_A LINE L1 5587 6582 0 3 1411 427 226 78 31 chrX 108300630 108300751 -58349545 + L1M2 LINE L1 5317 5445 -723 3 1411 221 0 35 0 chrX 108300751 108300780 -58349516 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 3 1411 481 235 109 0 chrX 108300780 108300899 -58349397 - B1_Mur1 SINE Alu -13 136 5 3 1411 427 269 75 93 chrX 108300899 108301071 -58349225 + L1M2 LINE L1 5435 5605 -695 3 1411 1515 301 16 16 chrX 108301089 108301166 -58349130 - Lx9 LINE L1 -594 7050 6975 3 1411 2748 183 53 31 chrX 108301166 108301769 -58348527 + RLTR18 LTR ERVK 1 616 0 3 1411 1515 301 16 16 chrX 108301769 108301885 -58348411 - Lx9 LINE L1 -670 6974 6859 3 1411 3044 23 0 0 chrX 108301885 108302231 -58348065 - ORR1A1 LTR MaLR 0 346 1 3 1411 1515 301 16 16 chrX 108302231 108302533 -58347763 - Lx9 LINE L1 -786 6858 6555 3 1411 446 400 25 17 chrX 108302726 108303087 -58347209 - Lx8 LINE L1 -141 7332 6969 3 1411 348 43 0 0 chrX 108303089 108303135 -58347161 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1411 4922 236 70 40 chrX 108303242 108304893 -58345403 + Lx2B LINE L1 5544 7000 0 3 1411 198 143 0 0 chrX 108305161 108305196 -58345100 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 3 1411 2463 93 8 19 chrX 108306173 108306534 -58343762 + L1_Mus2 LINE L1 5932 6281 -285 3 1411 3340 61 7 2 chrX 108306545 108306970 -58343326 - L1_Mus3 LINE L1 -154 6484 6058 3 1411 21 36 0 0 chrX 108307074 108307102 -58343194 + AT_rich Low_complexity Low_complexity 1 28 0 3 1411 423 0 0 0 chrX 108307103 108307150 -58343146 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1411 2502 88 0 0 chrX 108307156 108307498 -58342798 - L1_Mm LINE L1 -1077 4806 4465 3 1411 485 369 0 0 chrX 108307500 108307641 -58342655 - B3A SINE B2 -55 143 3 3 1411 260 321 95 0 chrX 108307729 108307866 -58342430 - L1MD LINE L1 -1569 4577 4428 3 1411 180 111 0 0 chrX 108307879 108307906 -58342390 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 1411 752 334 132 52 chrX 108307912 108308790 -58341506 - L1M5 LINE L1 -1757 4389 3442 3 1411 4587 186 49 9 chrX 108309062 108310250 -58340046 + L1_Mur2 LINE L1 1057 2296 -3581 3 1411 1939 110 13 3 chrX 108310253 108310553 -58339743 + MTB LTR MaLR 1 303 -97 3 1411 3340 13 0 3 chrX 108311743 108312129 -58338167 + L1Md_T LINE L1 6198 6582 0 3 1411 2599 145 37 9 chrX 108312158 108312780 -58337516 - MTB-int LTR MaLR -48 1050 1 3 1411 1563 79 0 0 chrX 108312782 108312985 -58337311 - MTB LTR MaLR -2 398 196 3 1411 31 0 0 0 chrX 108313222 108313253 -58337043 + AT_rich Low_complexity Low_complexity 1 31 0 3 1411 1088 236 201 29 chrX 108313277 108313626 -58336670 + MTD LTR MaLR 1 409 -10 3 1411 1284 267 27 16 chrX 108313732 108314097 -58336199 - Lx9 LINE L1 -171 7473 7105 3 1411 27 73 0 0 chrX 108314189 108314244 -58336052 + AT_rich Low_complexity Low_complexity 1 55 0 3 1411 236 283 0 0 chrX 108314529 108314589 -58335707 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 3 1411 212 370 67 21 chrX 108314904 108315097 -58335199 + MIR SINE MIR 17 218 -44 3 1411 181 415 0 0 chrX 108315164 108315282 -58335014 - L3 LINE CR1 -300 4189 4072 3 1411 396 0 0 0 chrX 108315302 108315346 -58334950 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 1411 1076 109 0 0 chrX 108315521 108315668 -58334628 + B1_Mm SINE Alu 1 147 0 3 1411 3775 49 6 0 chrX 108316388 108316855 -58333441 + L1_Mus1 LINE L1 6098 6567 0 3 1411 309 354 105 39 chrX 108317040 108317193 -58333103 - RSINE1 SINE B4 0 165 3 3 1411 545 125 10 0 chrX 108317222 108317326 -58332970 - Lx9 LINE L1 -29 7615 7511 4 1411 378 0 0 0 chrX 108317327 108317369 -58332927 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 1411 21 36 0 0 chrX 108317409 108317437 -58332859 + AT_rich Low_complexity Low_complexity 1 28 0 4 1411 238 273 0 0 chrX 108318223 108318289 -58332007 + GA-rich Low_complexity Low_complexity 2 67 0 4 1411 202 174 0 42 chrX 108318579 108318627 -58331669 + GA-rich Low_complexity Low_complexity 2 47 0 4 1411 327 25 0 0 chrX 108319241 108319281 -58331015 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1411 22 0 0 0 chrX 108319526 108319548 -58330748 + AT_rich Low_complexity Low_complexity 1 22 0 4 1411 295 0 0 123 chrX 108319987 108320044 -58330252 + (T)n Simple_repeat Simple_repeat 1 50 0 4 1411 1078 89 14 0 chrX 108320044 108320190 -58330106 - B1_Mus1 SINE Alu 0 148 1 4 1411 23 68 0 0 chrX 108320540 108320584 -58329712 + AT_rich Low_complexity Low_complexity 1 44 0 4 1411 213 211 0 0 chrX 108320613 108320670 -58329626 + (CATA)n Simple_repeat Simple_repeat 4 60 0 4 1411 585 72 0 0 chrX 108321317 108321400 -58328896 + (TG)n Simple_repeat Simple_repeat 1 83 0 4 1411 4512 172 26 6 chrX 108321521 108322333 -58327963 - Lx4A LINE L1 -168 6890 6063 4 1411 9764 140 67 7 chrX 108322729 108324647 -58325649 - Lx4A LINE L1 -990 6068 4046 4 1411 32246 43 3 1 chrX 108324675 108329197 -58321099 - L1Md_A LINE L1 -2 6580 2044 4 1411 2367 159 106 0 chrX 108329725 108330178 -58320118 - L1Md_F LINE L1 -5824 695 195 4 1411 8019 100 8 0 chrX 108330201 108332084 -58318212 - L1_Mus2 LINE L1 -1 6565 4667 4 1411 633 208 19 7 chrX 108332075 108332230 -58318066 - L1_Mur2 LINE L1 -1829 4048 3892 4 1411 1152 51 0 0 chrX 108332224 108332362 -58317934 + L1_Mus2 LINE L1 6127 6264 -302 4 1411 910 0 9 26 chrX 108333188 108333304 -58316992 - L1Md_A LINE L1 -212 6370 6257 4 1411 5197 171 101 34 chrX 108333312 108334076 -58316220 - L1_Mur2 LINE L1 -1991 3886 3011 4 1411 4926 41 0 2 chrX 108334076 108334669 -58315627 - L1Md_F2 LINE L1 -4 6578 5987 4 1411 5197 171 101 34 chrX 108334669 108335207 -58315089 - L1_Mur2 LINE L1 -2867 3010 2497 4 1411 189 0 0 0 chrX 108335207 108335228 -58315068 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1411 7150 69 1 6 chrX 108335241 108336282 -58314014 - L1Md_F2 LINE L1 -19 6563 5530 4 1411 2768 193 52 5 chrX 108336278 108336938 -58313358 - L1_Mur2 LINE L1 -3382 2504 1814 4 1411 527 157 137 0 chrX 108336952 108337054 -58313242 - RLTR41 LTR ERV1 -330 116 1 4 1411 941 300 18 21 chrX 108337143 108337567 -58312729 - RLTR6-int LTR ERV1 -61 7717 7045 4 1411 1847 276 22 14 chrX 108337793 108338588 -58311708 - MuRRS4-int LTR ERV1 -1049 4014 3533 4 1411 242 69 4 0 chrX 108339068 108339114 -58311182 - L1_Mus4 LINE L1 -758 5826 5780 4 1411 2100 83 7 3 chrX 108339114 108339403 -58310893 + L1_Mus3 LINE L1 6337 6626 -12 4 1411 297 0 0 0 chrX 108339408 108339441 -58310855 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 4 1411 673 323 62 49 chrX 108339808 108340936 -58309360 - MuRRS4-int LTR ERV1 -5130 2426 1196 4 1411 338 321 35 40 chrX 108341498 108341696 -58308600 - MuRRS4-int LTR ERV1 -6794 762 566 4 1411 292 294 107 137 chrX 108342585 108342782 -58307514 + MLT2B2 LTR ERVL 374 567 0 4 1411 307 343 261 58 chrX 108342783 108343094 -58307202 - MTE-int LTR MaLR -767 813 451 4 1411 2640 49 0 3 chrX 108343094 108343424 -58306872 - L1Md_F2 LINE L1 -3 6579 6251 4 1411 238 342 120 62 chrX 108343424 108343639 -58306657 - MTE-int LTR MaLR -1130 450 212 4 1411 597 304 31 20 chrX 108343679 108343874 -58306422 - B3A SINE B2 -1 197 1 4 1411 246 318 7 7 chrX 108344322 108344471 -58305825 - L1MA4 LINE L1 -371 5929 5781 4 1411 366 329 118 57 chrX 108344471 108344700 -58305596 - ORR1E LTR MaLR -93 266 24 4 1411 342 331 22 22 chrX 108344789 108344928 -58305368 - MTEa LTR MaLR 0 379 241 4 1411 598 343 71 60 chrX 108344987 108345340 -58304956 - ORR1E LTR MaLR 0 359 3 4 1411 980 336 52 34 chrX 108345340 108345702 -58304594 - ORR1E-int LTR MaLR -51 1529 1161 4 1411 645 11 33 0 chrX 108345758 108345848 -58304448 - L1Md_F3 LINE L1 -1 6583 6491 4 1411 3117 141 52 42 chrX 108345907 108346695 -58303601 - ORR1B1-int LTR MaLR -23 1940 1479 4 1411 5126 166 64 54 chrX 108346697 108347789 -58302507 + RLTR25A LTR ERVK 1 1103 0 4 1411 1168 176 35 47 chrX 108347789 108347978 -58302318 - ORR1B1-int LTR MaLR -488 1475 1290 4 1411 1395 175 298 9 chrX 108347978 108348324 -58301972 + RLTR41 LTR ERV1 1 446 0 4 1411 524 303 139 56 chrX 108348324 108348363 -58301933 - ORR1B1-int LTR MaLR -561 537 503 4 1411 391 323 111 9 chrX 108349543 108349768 -58300528 + RLTR6-int LTR ERV1 1624 1871 -5907 4 1411 352 53 0 0 chrX 108349776 108349833 -58300463 - L1_Mm LINE L1 -3821 2062 2006 4 1411 1467 60 45 0 chrX 108349833 108350032 -58300264 + L1Md_F2 LINE L1 5379 5586 -297 4 1411 7482 76 2 11 chrX 108350032 108351037 -58299259 + L1Md_F2 LINE L1 5587 6582 0 4 1411 1462 284 14 14 chrX 108351304 108351733 -58298563 + MuRRS4-int LTR ERV1 3547 3975 -1088 4 1411 2880 12 0 0 chrX 108351750 108352072 -58298224 - RLTRETN_Mm LTR ERVK 0 322 1 4 1411 300 353 8 0 chrX 108352279 108352412 -58297884 + MMERGLN-int LTR ERV1 5414 5547 -2009 4 1411 1156 82 7 0 chrX 108353064 108353211 -58297085 + B1_Mus1 SINE Alu 1 148 0 4 1411 4836 102 16 27 chrX 108353225 108354253 -58296043 + MusHAL1 LINE L1 1153 2119 -3764 4 1411 23221 60 2 3 chrX 108354250 108358117 -58292179 - L1Md_F2 LINE L1 -12 6570 2712 4 1411 29473 57 0 9 chrX 108358218 108362266 -58288030 - L1_Mm LINE L1 -398 5485 1472 4 1411 5022 40 5 0 chrX 108362268 108362870 -58287426 + L1Md_F3 LINE L1 5980 6584 0 4 1411 518 247 95 0 chrX 108362888 108363046 -58287250 + L1MA9 LINE L1 5464 5636 -664 4 1411 521 186 155 0 chrX 108363133 108363230 -58287066 + B1_Mur2 SINE Alu 1 112 -37 4 1411 468 266 3 7 chrX 108363243 108363414 -58286882 + L1MA9 LINE L1 5795 5969 -322 4 1411 21 36 0 0 chrX 108364198 108364226 -58286070 + AT_rich Low_complexity Low_complexity 1 28 0 4 1411 243 0 0 0 chrX 108364257 108364284 -58286012 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1411 3691 188 73 75 chrX 108365507 108366352 -58283944 + RMER1A Other Other 71 867 -163 4 1411 374 0 0 21 chrX 108366352 108366399 -58283897 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1411 3691 188 73 75 chrX 108366399 108366496 -58283800 + RMER1A Other Other 868 1010 -20 4 1411 2010 143 75 14 chrX 108366804 108367152 -58283144 + MTC LTR MaLR 53 421 0 4 1411 4618 94 3 0 chrX 108368093 108368852 -58281444 - L1_Mus4 LINE L1 -404 6232 5472 4 1411 2835 104 33 9 chrX 108368854 108369283 -58281013 + Lx LINE L1 6215 6653 -1 4 1411 339 24 0 0 chrX 108369651 108369665 -58280631 + (A)n Simple_repeat Simple_repeat 1 14 0 4 1411 1116 75 7 7 chrX 108369665 108369812 -58280484 + B1_Mm SINE Alu 1 147 0 4 1411 339 24 0 0 chrX 108369812 108369839 -58280457 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1411 913 146 39 29 chrX 108369839 108370044 -58280252 - RCHARR1 DNA MER1_type -43 931 725 4 1411 1121 249 15 44 chrX 108370068 108370408 -58279888 + Lx9 LINE L1 6961 7290 -354 4 1411 1779 260 61 8 chrX 108370632 108371654 -58278642 - Lx5 LINE L1 -19 7031 6057 4 1411 1074 178 34 4 chrX 108371676 108371913 -58278383 + Lx5 LINE L1 5776 6019 -1031 4 1411 2258 245 72 25 chrX 108371961 108372627 -58277669 - RCHARR1 DNA MER1_type -274 700 4 4 1411 433 300 84 42 chrX 108372645 108372906 -58277390 - L1MC4 LINE L1 -835 7207 6936 4 1411 236 111 0 22 chrX 108373104 108373150 -58277146 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 4 1411 884 215 132 48 chrX 108373157 108373430 -58276866 + RLTR20B3 LTR ERVK 2 297 -280 4 1411 3366 150 61 63 chrX 108373582 108373939 -58276357 + RMER12 LTR ERVK 1 353 -969 4 1411 499 96 0 0 chrX 108373939 108374022 -58276274 + L1_Mus2 LINE L1 6483 6565 -1 4 1411 3366 150 61 63 chrX 108374022 108374390 -58275906 + RMER12 LTR ERVK 354 724 -598 4 1411 1595 124 16 15 chrX 108374393 108374669 -58275627 + ORR1A2 LTR MaLR 8 276 -51 4 1411 294 29 0 0 chrX 108374732 108374767 -58275529 + (TCCA)n Simple_repeat Simple_repeat 1 35 0 4 1411 1136 243 37 13 chrX 108374795 108375171 -58275125 + L1_Mur3 LINE L1 1835 2219 -3661 4 1411 23537 69 55 1 chrX 108375197 108378649 -58271647 + L1Md_F2 LINE L1 1950 5586 -297 4 1411 7362 57 33 3 chrX 108378650 108379611 -58270685 + L1Md_F2 LINE L1 5588 6577 -5 4 1411 2300 256 14 19 chrX 108379638 108380420 -58269876 + L1_Mur3 LINE L1 2209 2986 -2894 4 1411 264 273 15 0 chrX 108380437 108380503 -58269793 + Lx8 LINE L1 7174 7240 -233 4 1411 594 0 0 0 chrX 108380610 108380676 -58269620 + (TC)n Simple_repeat Simple_repeat 1 66 0 4 1411 699 97 0 0 chrX 108380751 108380865 -58269431 + (GA)n Simple_repeat Simple_repeat 1 114 0 4 1411 2529 221 71 30 chrX 108380893 108381199 -58269097 + Lx9 LINE L1 6442 6769 -875 4 1411 2803 49 3 11 chrX 108381199 108381548 -58268748 + ORR1A1 LTR MaLR 1 346 0 4 1411 2529 221 71 30 chrX 108381548 108382001 -58268295 + Lx9 LINE L1 6770 7232 -412 4 1411 9023 87 15 11 chrX 108381991 108383047 -58267249 - MusHAL1 LINE L1 -1263 2090 1028 4 1411 2827 35 9 14 chrX 108383047 108383391 -58266905 - ORR1A1 LTR MaLR -4 342 1 4 1411 9023 82 31 7 chrX 108383391 108384394 -58265902 - MusHAL1 LINE L1 -2326 1027 3 4 1411 220 139 23 0 chrX 108384861 108384904 -58265392 + A-rich Low_complexity Low_complexity 2 45 0 4 1411 1248 41 0 0 chrX 108385294 108385441 -58264855 - B1_Mus2 SINE Alu 0 147 1 4 1411 1368 316 5 15 chrX 108385672 108386160 -58264136 + Lx7 LINE L1 6801 7296 -177 4 1411 511 84 21 0 chrX 108386160 108386255 -58264041 + (TG)n Simple_repeat Simple_repeat 1 97 0 4 1411 762 355 27 38 chrX 108386255 108386406 -58263890 + Lx7 LINE L1 7297 7444 -29 4 1411 1619 297 75 16 chrX 108387411 108388096 -58262200 + Lx8 LINE L1 6743 7467 -6 4 1411 234 0 0 0 chrX 108388388 108388414 -58261882 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 4 1411 597 253 48 36 chrX 108389129 108389297 -58260999 + ID_B1 SINE B4 40 209 -15 4 1411 223 217 0 21 chrX 108389584 108389631 -58260665 + PB1D7 SINE Alu 74 119 -1 4 1411 378 0 0 0 chrX 108389655 108389697 -58260599 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 1411 263 312 0 0 chrX 108389881 108389945 -58260351 + L1M2c LINE L1 2137 2200 -4589 4 1411 515 221 152 0 chrX 108390211 108390356 -58259940 - Lx9 LINE L1 -225 7419 7253 4 1411 373 324 0 29 chrX 108390467 108390572 -58259724 - B4A SINE B4 -181 111 10 4 1411 2195 111 6 18 chrX 108390749 108391080 -58259216 + ORR1A2 LTR MaLR 1 327 0 4 1411 2637 115 8 5 chrX 108391080 108391482 -58258814 + ORR1A2-int LTR MaLR 1 403 -1560 4 1411 375 226 0 0 chrX 108391572 108391674 -58258622 + GA-rich Low_complexity Low_complexity 2 103 0 4 1411 377 250 133 9 chrX 108391685 108391798 -58258498 - RSINE1 SINE B4 -36 129 3 4 1411 966 35 0 0 chrX 108394320 108394436 -58255860 - L1Md_F2 LINE L1 -103 6479 6364 4 1411 5727 43 2 0 chrX 108394449 108395227 -58255069 - L1Md_F2 LINE L1 -312 6270 5492 4 1411 793 46 28 0 chrX 108395228 108395336 -58254960 + MTA_Mm LTR MaLR 284 394 -2 4 1411 8835 44 6 1 chrX 108395339 108396431 -58253865 + MTA_Mm-int LTR MaLR 2 1098 0 4 176 1016 8 0 0 chrX 108396431 108396548 -58253748 + MTA_Mm LTR MaLR 1 117 -279 4 1412 519 15 15 0 chrX 108396548 108396613 -58253683 - MTB LTR MaLR 0 400 335 5 1412 2069 26 11 0 chrX 108396937 108397202 -58253094 + MTA_Mm LTR MaLR 129 396 0 4 1412 315 0 0 0 chrX 108398059 108398094 -58252202 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1412 529 249 73 34 chrX 108398408 108398603 -58251693 - MTEb LTR MaLR -8 371 170 5 1412 1883 106 33 0 chrX 108398844 108399119 -58251177 + ORR1A2 LTR MaLR 1 284 -43 5 1412 760 109 50 7 chrX 108399119 108399258 -58251038 + Lx LINE L1 6508 6652 -2 5 1412 1215 41 0 0 chrX 108399288 108399434 -58250862 + B1_Mus2 SINE Alu 1 146 -1 5 1412 495 0 0 0 chrX 108399434 108399489 -58250807 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1412 1017 194 66 5 chrX 108399500 108399697 -58250599 + B3 SINE B2 2 210 -6 5 1412 439 69 0 0 chrX 108399729 108399787 -58250509 + ORR1A3 LTR MaLR 269 326 0 5 1412 372 304 145 47 chrX 108400235 108400490 -58249806 + ORR1E LTR MaLR 76 355 -4 5 1412 438 271 19 38 chrX 108400516 108400673 -58249623 + L1M4 LINE L1 5 158 -6384 5 1412 3688 71 0 8 chrX 108400954 108401453 -58248843 - L1_Mm LINE L1 -779 5104 4610 5 1412 3481 65 14 22 chrX 108401453 108401627 -58248669 + L1_Mus2 LINE L1 6080 6256 -310 5 1412 3754 55 116 4 chrX 108401627 108402134 -58248162 - LTRIS2 LTR ERV1 0 564 1 5 1412 3481 65 14 22 chrX 108402134 108402449 -58247847 + L1_Mus2 LINE L1 6257 6565 -1 5 1412 422 264 154 23 chrX 108402621 108402927 -58247369 + L1MB7 LINE L1 5823 6168 -16 5 1412 349 300 59 69 chrX 108402973 108403177 -58247119 + L1MC4a LINE L1 5812 6013 -1869 5 1412 399 260 20 20 chrX 108403446 108403548 -58246748 - MTEb LTR MaLR -2 377 276 5 1412 379 244 0 24 chrX 108403545 108403629 -58246667 + MTEa LTR MaLR 9 90 -289 5 1412 1546 240 46 28 chrX 108403794 108404096 -58246200 - Lx9 LINE L1 -268 7376 7060 5 1412 333 0 0 0 chrX 108404096 108404133 -58246163 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1412 1546 240 46 28 chrX 108404133 108404267 -58246029 - Lx9 LINE L1 -585 7059 6932 5 1412 458 255 10 10 chrX 108404406 108404505 -58245791 + B1F SINE Alu 1 99 -50 5 1412 309 296 176 29 chrX 108404589 108404725 -58245571 + MER47B DNA MER2_type 89 244 -174 5 1412 22 0 0 0 chrX 108405018 108405040 -58245256 + AT_rich Low_complexity Low_complexity 1 22 0 5 1412 456 237 29 37 chrX 108406089 108406225 -58244071 + L1MB4 LINE L1 5997 6131 -49 5 1412 220 300 16 16 chrX 108406231 108406292 -58244004 + B1F2 SINE Alu 1 61 -88 5 1412 32 81 0 0 chrX 108406303 108406377 -58243919 + AT_rich Low_complexity Low_complexity 1 74 0 5 1412 536 280 198 8 chrX 108406565 108406725 -58243571 - L1MCb LINE L1 -4680 2071 1889 5 1412 357 24 0 0 chrX 108406725 108406767 -58243529 + (TC)n Simple_repeat Simple_repeat 1 42 0 5 1412 536 280 198 8 chrX 108406767 108407211 -58243085 - L1MCb LINE L1 -4863 1888 1353 5 1412 228 246 27 14 chrX 108407490 108407564 -58242732 - L1MC1 LINE L1 -174 6159 6085 5 1412 928 305 74 15 chrX 108407563 108408035 -58242261 - L1MC1 LINE L1 -387 5946 5447 5 1412 239 257 57 0 chrX 108408051 108408156 -58242140 - L1MC1 LINE L1 -962 5382 5272 5 1412 1112 267 125 38 chrX 108408192 108408800 -58241496 - L1MCb LINE L1 -4850 1195 535 5 1412 207 88 0 0 chrX 108408901 108408935 -58241361 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1412 1169 57 0 0 chrX 108408943 108409084 -58241212 - B1_Mus1 SINE Alu -6 142 2 5 1412 235 353 25 61 chrX 108409087 108409283 -58241013 - L1MCa LINE L1 -6015 493 305 5 1412 268 246 14 42 chrX 108409924 108409996 -58240300 - BC1_Mm scRNA scRNA -81 71 2 5 1412 198 329 168 42 chrX 108410730 108410873 -58239423 + L2b LINE L2 3121 3281 -94 5 1412 181 205 0 25 chrX 108411307 108411347 -58238949 - L2c LINE L2 0 3387 3349 5 1412 348 335 130 24 chrX 108412437 108412645 -58237651 + MIRb SINE MIR 30 259 -3 5 1412 190 333 70 23 chrX 108412642 108412728 -58237568 + MIRb SINE MIR 59 148 -120 5 1412 703 127 13 0 chrX 108412847 108412997 -58237299 + (TG)n Simple_repeat Simple_repeat 1 152 0 5 1412 579 263 29 7 chrX 108413129 108413267 -58237029 - RSINE1 SINE B4 -13 152 12 5 1412 624 342 32 40 chrX 108413307 108413554 -58236742 - B4A SINE B4 -46 246 2 5 1412 284 299 20 107 chrX 108414274 108414424 -58235872 - B4 SINE B4 -153 139 3 5 1412 950 240 251 29 chrX 108414454 108414908 -58235388 - Lx9 LINE L1 -2 7642 7088 5 1412 3018 144 32 13 chrX 108414908 108415441 -58234855 + RLTR13D1 LTR ERVK 1 543 -359 5 1412 3991 76 26 11 chrX 108415414 108415985 -58234311 + RLTR13D1 LTR ERVK 227 806 0 5 1412 1471 201 78 38 chrX 108415985 108416357 -58233939 - Lx9 LINE L1 -551 7093 6707 5 1412 568 259 36 7 chrX 108416539 108416679 -58233617 + B1_Mur2 SINE Alu 6 149 0 5 1412 261 233 35 35 chrX 108416783 108416883 -58233413 - L1M3 LINE L1 -888 5403 5298 5 1412 1550 293 95 37 chrX 108417117 108417737 -58232559 - Lx8 LINE L1 -244 7229 6574 5 1412 669 227 88 49 chrX 108417766 108417970 -58232326 - RMER15 LTR ERVL -16 559 348 5 1412 313 307 23 0 chrX 108418214 108418302 -58231994 - Lx8 LINE L1 -908 6565 6476 5 1412 1307 175 96 33 chrX 108418505 108418806 -58231490 - L1_Rod LINE L1 -622 5225 4906 5 1412 201 47 45 23 chrX 108419333 108419377 -58230919 + (CAAAAA)n Simple_repeat Simple_repeat 3 47 0 5 1412 187 31 62 0 chrX 108419440 108419472 -58230824 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1412 265 283 0 16 chrX 108419488 108419549 -58230747 - ID4_ SINE ID -19 64 5 5 1412 272 78 0 38 chrX 108419562 108419615 -58230681 + (TTTTTG)n Simple_repeat Simple_repeat 2 52 0 5 1412 408 97 73 0 chrX 108419742 108419866 -58230430 + (CA)n Simple_repeat Simple_repeat 2 134 0 5 1412 17312 23 0 3 chrX 108469907 108471985 -58178311 - L1_Mm LINE L1 -882 5001 2931 5 1412 357 124 62 8 chrX 108472104 108472234 -58178062 + (CA)n Simple_repeat Simple_repeat 2 138 0 5 1412 651 92 52 7 chrX 108472250 108472404 -58177892 + (CA)n Simple_repeat Simple_repeat 2 162 0 5 1412 1431 75 16 0 chrX 108472447 108472635 -58177661 + B2_Mm2 SINE B2 3 193 -2 5 1412 259 396 0 12 chrX 108472816 108472977 -58177319 + MIR SINE MIR 104 262 0 5 1412 8435 26 0 0 chrX 108474299 108475688 -58174608 - L1Md_T LINE L1 -1 6581 5193 5 1412 36744 32 15 0 chrX 108475688 108480263 -58170033 - L1Md_F LINE L1 -131 5752 1108 5 1412 4892 76 68 0 chrX 108480231 108480904 -58169392 - L1Md_F LINE L1 -5411 1205 487 5 1412 818 269 136 27 chrX 108481078 108482006 -58168290 - L1ME1 LINE L1 -2 6631 5557 5 1412 2051 301 84 61 chrX 108482081 108483194 -58167102 - Lx8 LINE L1 -129 7344 6206 5 1412 24 0 0 0 chrX 108483209 108483233 -58167063 + AT_rich Low_complexity Low_complexity 1 24 0 5 1412 1301 285 68 40 chrX 108483259 108483844 -58166452 + Lx9 LINE L1 5331 5976 -1668 5 1412 1307 239 42 63 chrX 108484086 108484514 -58165782 + MTD LTR MaLR 1 419 0 5 1412 516 258 75 16 chrX 108484623 108484847 -58165449 - L1ME1 LINE L1 -1252 5285 5050 5 1412 1268 144 96 0 chrX 108484862 108485091 -58165205 + Lx3B LINE L1 6720 6970 -3 5 1412 364 115 0 0 chrX 108485141 108485202 -58165094 + Lx5 LINE L1 5908 5968 -1082 5 1412 3933 212 69 78 chrX 108485202 108485637 -58164659 + RMER12 LTR ERVK 1 431 -891 5 1412 1012 157 83 17 chrX 108485637 108485818 -58164478 + B2_Mm2 SINE B2 3 195 0 5 1412 3933 215 80 75 chrX 108485818 108486743 -58163553 + RMER12 LTR ERVK 432 1844 -4 5 1412 3021 191 74 24 chrX 108486755 108487421 -58162875 + Lx5 LINE L1 6032 6730 -320 5 1412 225 178 0 0 chrX 108487446 108487491 -58162805 + CT-rich Low_complexity Low_complexity 2 46 0 5 1412 3421 204 36 9 chrX 108487798 108488472 -58161824 + RMER1B Other Other 359 1050 -16 5 1412 679 307 42 40 chrX 108488502 108488981 -58161315 - L1ME1 LINE L1 -3274 3263 2784 5 1412 180 0 0 0 chrX 108488981 108489001 -58161295 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 1412 754 240 173 35 chrX 108489001 108489567 -58160729 - L1ME1 LINE L1 -3860 2677 2042 5 1412 757 287 85 14 chrX 108489638 108489921 -58160375 - L1ME1 LINE L1 -5472 1161 859 5 1412 715 87 96 0 chrX 108489949 108490064 -58160232 - B1_Mm SINE Alu -21 126 1 5 1412 389 222 16 57 chrX 108489962 108490086 -58160210 - ID_B1 SINE B4 -36 188 70 5 1412 844 109 80 7 chrX 108490094 108490232 -58160064 + Lx3_Mus LINE L1 6579 6726 -283 5 1412 383 0 0 21 chrX 108490307 108490355 -58159941 + (TTA)n Simple_repeat Simple_repeat 2 48 0 5 1412 2350 142 89 31 chrX 108490361 108490811 -58159485 - Lx3B LINE L1 0 6973 6498 5 1412 640 0 0 0 chrX 108490825 108490897 -58159399 + tRNA-Arg-AGG tRNA tRNA 1 72 -4 5 1412 264 279 15 0 chrX 108490917 108490985 -58159311 - L1ME1 LINE L1 -6283 350 282 5 1412 246 62 0 0 chrX 108491198 108491230 -58159066 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1412 1089 52 0 0 chrX 108491230 108491366 -58158930 + B1_Mm SINE Alu 1 136 -11 5 1412 1127 68 0 7 chrX 108491406 108491541 -58158755 + B1_Mus1 SINE Alu 3 137 -11 5 1412 335 41 20 0 chrX 108491541 108491590 -58158706 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 5 1412 1127 68 0 7 chrX 108491590 108491601 -58158695 + B1_Mus1 SINE Alu 138 148 0 5 1412 267 143 0 0 chrX 108491604 108491646 -58158650 - MTC LTR MaLR -379 42 1 5 1412 533 359 76 27 chrX 108492246 108492575 -58157721 + L3 LINE CR1 1990 2334 -2155 5 1412 261 79 0 11 chrX 108492742 108492806 -58157490 + L1_Mus4 LINE L1 6587 6648 -6 5 1412 28 29 0 0 chrX 108493004 108493039 -58157257 + AT_rich Low_complexity Low_complexity 1 35 0 5 1412 1028 261 75 7 chrX 108493064 108493342 -58156954 + Lx8 LINE L1 7011 7307 -166 5 1412 994 114 0 7 chrX 108493365 108493515 -58156781 + B2_Mm2 SINE B2 2 150 -45 5 1412 237 175 0 0 chrX 108493869 108493909 -58156387 - MER5A DNA MER1_type -44 145 106 5 1412 1182 234 133 30 chrX 108494022 108494361 -58155935 + MTE2b LTR MaLR 1 374 -5 5 1412 421 325 32 0 chrX 108494694 108494817 -58155479 + ORR1E LTR MaLR 1 127 -232 5 1412 489 230 22 80 chrX 108495400 108495460 -58154836 - ORR1D2 LTR MaLR -8 362 310 5 1412 1376 75 43 0 chrX 108495460 108495647 -58154649 - B2_Mm2 SINE B2 0 195 1 5 1412 489 230 22 80 chrX 108495647 108495723 -58154573 - ORR1D2 LTR MaLR -61 309 234 5 1412 212 254 75 0 chrX 108496306 108496373 -58153923 + L4 LINE RTE 1766 1837 -192 5 1412 410 108 14 0 chrX 108496747 108496821 -58153475 + (GGAA)n Simple_repeat Simple_repeat 4 78 0 5 1412 4385 12 0 0 chrX 108497035 108497529 -58152767 + L1Md_A LINE L1 6087 6580 -2 5 1412 468 0 0 0 chrX 108503672 108503724 -58146572 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 1 1412 298 331 20 27 chrX 108503737 108503886 -58146410 + L1MA6 LINE L1 5783 5930 -373 2 1412 1457 105 68 4 chrX 108503899 108504147 -58146149 + Lx2A LINE L1 6745 7008 0 3 1412 206 57 0 54 chrX 108504152 108504189 -58146107 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 4 1412 1162 41 14 0 chrX 108504362 108504507 -58145789 + B1_Mus2 SINE Alu 1 147 0 5 1412 1061 80 0 0 chrX 108505630 108505767 -58144529 + B1_Mus2 SINE Alu 1 137 -10 6 1412 216 0 0 0 chrX 108505767 108505791 -58144505 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1412 25 31 0 0 chrX 108506269 108506301 -58143995 + AT_rich Low_complexity Low_complexity 1 32 0 8 1412 554 228 132 48 chrX 108506375 108506647 -58143649 + L1MA6 LINE L1 6005 6299 -1 2 1412 553 315 7 14 chrX 108506655 108506800 -58143496 + ID_B1 SINE B4 81 224 0 9 1412 1013 87 0 7 chrX 108506814 108506953 -58143343 + B1_Mus2 SINE Alu 1 138 -9 1 1412 283 316 154 4 chrX 108507005 108507284 -58143012 + L1MEc LINE L1 107 427 -5973 1 1412 21 36 0 0 chrX 108507451 108507479 -58142817 + AT_rich Low_complexity Low_complexity 1 28 0 1 1412 1038 240 188 23 chrX 108507598 108508242 -58142054 + L1MEc LINE L1 539 1288 -5112 1 1412 801 121 0 0 chrX 108508282 108508406 -58141890 + (TA)n Simple_repeat Simple_repeat 1 124 0 1 1412 222 37 0 0 chrX 108508407 108508434 -58141862 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 1 1412 600 14 0 0 chrX 108508776 108508845 -58141451 + (GGAA)n Simple_repeat Simple_repeat 3 71 0 1 1412 299 25 25 0 chrX 108508845 108508885 -58141411 + (GA)n Simple_repeat Simple_repeat 1 41 0 1 1412 303 93 0 0 chrX 108508925 108508968 -58141328 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 1 1412 534 16 0 0 chrX 108509799 108509862 -58140434 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 1412 7313 79 7 2 chrX 108509901 108511162 -58139134 - L1_Mus1 LINE L1 -3 6564 5300 1 1412 345 233 29 2 chrX 108511449 108511531 -58138765 + PB1D9 SINE Alu 24 106 -43 2 1412 549 0 0 0 chrX 108511590 108511651 -58138645 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 1412 1147 265 70 14 chrX 108511659 108512076 -58138220 + Lx9 LINE L1 7195 7634 -10 2 1412 25 0 0 0 chrX 108512668 108512693 -58137603 + AT_rich Low_complexity Low_complexity 1 25 0 2 1412 30 45 0 0 chrX 108513329 108513373 -58136923 + AT_rich Low_complexity Low_complexity 1 44 0 2 1412 46 45 0 0 chrX 108513965 108514032 -58136264 + AT_rich Low_complexity Low_complexity 1 67 0 2 1412 394 307 0 34 chrX 108514480 108514598 -58135698 - PB1D7 SINE Alu -6 114 1 2 1412 32 0 0 0 chrX 108515052 108515084 -58135212 + AT_rich Low_complexity Low_complexity 1 32 0 2 1412 23 0 0 0 chrX 108515141 108515164 -58135132 + AT_rich Low_complexity Low_complexity 1 23 0 2 1412 27 49 0 0 chrX 108515271 108515312 -58134984 + AT_rich Low_complexity Low_complexity 1 41 0 2 1412 493 299 22 29 chrX 108515345 108515483 -58134813 + ID_B1 SINE B4 88 224 0 3 1412 32 26 0 0 chrX 108517466 108517505 -58132791 + AT_rich Low_complexity Low_complexity 1 39 0 3 1412 234 324 8 67 chrX 108517921 108518040 -58132256 + PB1D9 SINE Alu 1 112 -8 3 1412 873 161 0 0 chrX 108518762 108518905 -58131391 + B1_Mus1 SINE Alu 1 143 -5 3 1412 250 271 135 69 chrX 108519142 108519475 -58130821 + L1MEa LINE L1 493 847 -5223 3 1412 440 330 43 0 chrX 108520477 108520592 -58129704 - B1F SINE Alu -29 120 1 3 1412 229 390 66 72 chrX 108520494 108520596 -58129700 - B4A SINE B4 -100 192 85 3 1412 519 17 0 0 chrX 108520596 108520656 -58129640 + (TTTA)n Simple_repeat Simple_repeat 3 62 0 3 1412 229 390 66 72 chrX 108520656 108520705 -58129591 - B4A SINE B4 -208 84 42 3 1412 225 0 0 0 chrX 108520710 108520735 -58129561 + (ATTG)n Simple_repeat Simple_repeat 1 25 0 3 1412 1086 75 0 7 chrX 108520736 108520884 -58129412 - B1_Mus1 SINE Alu 0 148 2 3 1412 207 0 0 0 chrX 108521710 108521733 -58128563 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1412 273 314 178 0 chrX 108522446 108522564 -58127732 - B1F SINE Alu -3 146 8 4 1412 900 279 160 12 chrX 108525239 108525757 -58124539 + L1M2 LINE L1 2297 2891 -3252 4 1412 26 30 0 0 chrX 108525954 108525987 -58124309 + AT_rich Low_complexity Low_complexity 1 33 0 4 1412 26 0 0 0 chrX 108526400 108526426 -58123870 + AT_rich Low_complexity Low_complexity 1 26 0 4 1412 22 70 0 0 chrX 108526990 108527033 -58123263 + AT_rich Low_complexity Low_complexity 1 43 0 4 1412 22 56 0 0 chrX 108527539 108527575 -58122721 + AT_rich Low_complexity Low_complexity 1 36 0 4 1413 319 356 54 8 chrX 108527970 108528100 -58122196 + B1F SINE Alu 5 140 -9 4 1413 226 256 0 0 chrX 108528119 108528162 -58122134 + tRNA-Ala-GCY_ tRNA tRNA 2 44 -31 4 1413 327 179 0 0 chrX 108528373 108528440 -58121856 + A-rich Low_complexity Low_complexity 1 67 0 4 1413 213 196 0 0 chrX 108528450 108528496 -58121800 + GA-rich Low_complexity Low_complexity 4 49 0 5 1413 359 347 53 48 chrX 108528588 108528797 -58121499 + B4A SINE B4 81 290 -2 5 1413 1702 64 48 4 chrX 108529824 108530074 -58120222 + L1_Mus3 LINE L1 6372 6632 -6 5 1413 861 142 49 21 chrX 108531122 108531266 -58119030 + Lx4A LINE L1 6817 6964 -94 5 1413 23 0 0 0 chrX 108531543 108531566 -58118730 + AT_rich Low_complexity Low_complexity 1 23 0 5 1413 263 241 328 16 chrX 108531623 108531946 -58118350 + L1ME1 LINE L1 5256 5684 -675 5 1413 2540 78 17 0 chrX 108532032 108532389 -58117907 + L1_Mm LINE L1 4275 4637 -1246 5 1413 437 274 27 27 chrX 108532400 108532584 -58117712 + L1ME1 LINE L1 5798 5981 -198 5 1413 533 286 62 33 chrX 108532762 108533037 -58117259 - L1MC2 LINE L1 -249 6095 5813 5 1413 365 232 132 18 chrX 108533057 108533224 -58117072 - L1MA4 LINE L1 -6 6294 6109 5 1413 25 31 0 0 chrX 108533508 108533540 -58116756 + AT_rich Low_complexity Low_complexity 1 32 0 5 1413 349 342 89 15 chrX 108533904 108534106 -58116190 - L1MD2 LINE L1 -440 5919 5703 6 1413 22 35 0 0 chrX 108534642 108534671 -58115625 + AT_rich Low_complexity Low_complexity 1 29 0 6 1413 199 359 0 61 chrX 108534691 108534789 -58115507 - L4 LINE RTE -419 1610 1519 6 1413 669 276 15 0 chrX 108534850 108534984 -58115312 + RSINE1 SINE B4 8 143 -22 6 1413 788 68 17 25 chrX 108534990 108535003 -58115293 - B1_Mur4 SINE Alu 0 150 138 6 1413 444 82 0 0 chrX 108535003 108535064 -58115232 + (TA)n Simple_repeat Simple_repeat 2 62 0 6 1413 826 30 0 1 chrX 108535064 108535170 -58115126 - B1_Mus2 SINE Alu -13 137 31 6 1413 740 97 96 7 chrX 108535571 108535717 -58114579 - Lx2B LINE L1 0 7000 6842 6 1413 229 281 139 66 chrX 108536041 108536178 -58114118 - Tigger15a DNA TcMar -448 267 121 6 1413 186 275 111 12 chrX 108536249 108536330 -58113966 + MIRc SINE MIR 100 188 -80 6 1413 348 323 74 48 chrX 108536940 108537152 -58113144 - MIRb SINE MIR -30 238 20 6 1413 616 360 73 38 chrX 108537356 108537833 -58112463 - L1ME4a LINE L1 -212 5912 5419 7 1413 664 148 65 29 chrX 108537971 108538110 -58112186 + B2_Mm2 SINE B2 42 185 -10 7 1413 313 176 27 0 chrX 108538460 108538534 -58111762 + (TA)n Simple_repeat Simple_repeat 2 77 0 7 1413 509 257 9 9 chrX 108538621 108538735 -58111561 + PB1D10 SINE Alu 4 117 0 7 1413 1193 314 101 22 chrX 108540002 108540695 -58109601 + L1ME1 LINE L1 14 761 -5639 7 1413 294 275 39 55 chrX 108540865 108540992 -58109304 + L1ME1 LINE L1 577 701 -5699 7 1413 270 134 29 15 chrX 108541245 108541313 -58108983 + GA-rich Low_complexity Low_complexity 3 71 0 7 1413 983 45 113 0 chrX 108541864 108541997 -58108299 + B1_Mus1 SINE Alu 1 148 0 7 1413 693 296 148 47 chrX 108542130 108542792 -58107504 + L1ME1 LINE L1 2787 3534 -2785 7 1413 619 268 179 42 chrX 108542792 108543104 -58107192 + ORR1E LTR MaLR 1 355 -4 7 1413 693 295 154 48 chrX 108543104 108543362 -58106934 + L1ME1 LINE L1 3535 3787 -2532 7 1413 769 227 38 38 chrX 108543486 108543697 -58106599 + B3 SINE B2 6 216 0 7 1413 2038 275 140 35 chrX 108543716 108545937 -58104359 + L1ME1 LINE L1 3894 6349 -3 7 1413 691 310 118 10 chrX 108547438 108547744 -58102552 - Lx8 LINE L1 0 7473 7135 7 1413 249 217 17 0 chrX 108548252 108548312 -58101984 + CT-rich Low_complexity Low_complexity 2 62 0 8 1413 22 0 0 0 chrX 108548931 108548953 -58101343 + AT_rich Low_complexity Low_complexity 1 22 0 8 1413 654 248 19 25 chrX 108549121 108549282 -58101014 - Lx8 LINE L1 -312 7161 7002 7 1413 1028 98 0 34 chrX 108550034 108550182 -58100114 - B1_Mm SINE Alu -3 144 2 8 1413 442 301 13 27 chrX 108550991 108551141 -58099155 - B1F SINE Alu -1 148 1 8 1413 32 26 0 0 chrX 108551362 108551401 -58098895 + AT_rich Low_complexity Low_complexity 1 39 0 8 1413 1235 254 122 0 chrX 108551487 108551806 -58098490 - MTD LTR MaLR -14 405 48 8 1413 265 219 23 180 chrX 108551706 108551834 -58098462 - MT2A LTR ERVL -416 117 10 8 1413 180 0 0 0 chrX 108552957 108552977 -58097319 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 1413 401 258 11 11 chrX 108553097 108553191 -58097105 - B1F SINE Alu -1 148 55 8 1413 30 0 0 0 chrX 108554067 108554097 -58096199 + AT_rich Low_complexity Low_complexity 1 30 0 8 1413 35 24 0 0 chrX 108554252 108554294 -58096002 + AT_rich Low_complexity Low_complexity 1 42 0 9 1413 194 269 14 56 chrX 108554445 108554516 -58095780 - L2c LINE L2 0 3387 3320 9 1413 816 260 102 27 chrX 108554621 108554741 -58095555 + MLT1B LTR MaLR 76 204 -186 9 1413 297 0 0 0 chrX 108554741 108554774 -58095522 + (GA)n Simple_repeat Simple_repeat 2 34 0 9 1413 816 260 102 27 chrX 108554774 108554946 -58095350 + MLT1B LTR MaLR 205 389 -1 9 1413 303 93 0 0 chrX 108555504 108555547 -58094749 + (GGA)n Simple_repeat Simple_repeat 3 45 0 9 1413 219 69 0 0 chrX 108555547 108555576 -58094720 + (CCA)n Simple_repeat Simple_repeat 3 31 0 9 1413 282 311 97 16 chrX 108556237 108556361 -58093935 + B1F1 SINE Alu 14 147 -2 9 1413 891 237 50 10 chrX 108556936 108557136 -58093160 + B3 SINE B2 3 210 -6 9 1413 236 315 55 0 chrX 108557565 108557638 -58092658 - ID4_ SINE ID -6 77 1 9 1413 793 212 14 0 chrX 108558044 108558190 -58092106 + B1_Mur4 SINE Alu 1 148 -2 9 1413 31 58 0 0 chrX 108558481 108558533 -58091763 + AT_rich Low_complexity Low_complexity 1 52 0 1 1413 335 310 35 0 chrX 108559418 108559505 -58090791 + B1F SINE Alu 2 91 -58 1 1413 538 335 48 19 chrX 108559505 108559715 -58090581 + ID_B1 SINE B4 3 218 -6 1 1413 746 314 43 0 chrX 108560415 108560622 -58089674 + MER58A DNA MER1_type 1 216 -8 1 1413 4069 124 71 0 chrX 108560857 108561534 -58088762 - L1_Mur2 LINE L1 -1337 4540 3816 1 1413 321 257 171 14 chrX 108561744 108561890 -58088406 + L1ME3 LINE L1 5700 5868 -294 1 1413 1774 150 63 31 chrX 108561996 108562347 -58087949 - Lx LINE L1 -2 6652 6291 1 1413 22 70 0 0 chrX 108562916 108562959 -58087337 + AT_rich Low_complexity Low_complexity 1 43 0 1 1413 598 105 28 9 chrX 108562972 108563078 -58087218 + Lx3B LINE L1 6866 6973 0 1 1413 228 214 0 0 chrX 108563675 108563717 -58086579 + CT-rich Low_complexity Low_complexity 1 42 0 1 1413 917 338 38 75 chrX 108563860 108564443 -58085853 + MLT1E1A LTR MaLR 1 680 0 1 1413 421 250 44 11 chrX 108564771 108564872 -58085424 + B1F1 SINE Alu 27 128 -21 1 1413 1130 289 78 5 chrX 108565023 108565458 -58084838 + L1MB3 LINE L1 5507 5973 -210 1 1413 239 285 0 3 chrX 108565458 108565513 -58084783 + B1_Mur4 SINE Alu 44 97 -52 1 1413 228 250 26 53 chrX 108565536 108565612 -58084684 + L1MA6 LINE L1 5917 5990 -310 1 1413 504 268 36 0 chrX 108565719 108565831 -58084465 - RSINE1 SINE B4 -47 118 3 1 1413 358 242 102 31 chrX 108566376 108566504 -58083792 + B1F SINE Alu 4 140 -9 1 1413 426 295 38 0 chrX 108566541 108566646 -58083650 - B1F2 SINE Alu -32 117 9 1 1413 310 277 0 0 chrX 108566667 108566732 -58083564 - PB1D10 SINE Alu -35 82 18 1 1413 254 50 0 24 chrX 108567503 108567544 -58082752 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 1 1413 797 254 167 57 chrX 108567923 108568223 -58082073 + MTEa LTR MaLR 1 333 -46 1 1413 333 0 0 0 chrX 108568665 108568702 -58081594 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1413 312 254 201 30 chrX 108568913 108569181 -58081115 + L1M4 LINE L1 5050 5363 -783 1 1413 301 333 31 25 chrX 108569188 108569351 -58080945 + L1MC LINE L1 5375 5538 -795 1 1413 204 328 32 32 chrX 108570558 108570681 -58079615 + MER5B DNA MER1_type 51 173 -5 1 1413 2160 78 0 13 chrX 108571482 108571781 -58078515 + L1Md_F2 LINE L1 6276 6570 -12 1 1413 34 0 0 0 chrX 108571837 108571871 -58078425 + AT_rich Low_complexity Low_complexity 1 34 0 1 1413 211 420 93 9 chrX 108573313 108573539 -58076757 - MIRb SINE MIR -7 261 17 1 1413 23 33 0 0 chrX 108574624 108574654 -58075642 + AT_rich Low_complexity Low_complexity 1 30 0 1 1413 21 36 0 0 chrX 108575002 108575030 -58075266 + AT_rich Low_complexity Low_complexity 1 28 0 1 1413 1158 63 0 0 chrX 108578132 108578274 -58072022 + B1_Mus1 SINE Alu 2 143 -5 1 1413 352 51 0 33 chrX 108578279 108578340 -58071956 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 1413 423 0 0 0 chrX 108578398 108578445 -58071851 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1413 192 271 156 0 chrX 108578518 108578614 -58071682 + L2 LINE L2 1672 1782 -1637 1 1413 549 346 99 27 chrX 108578639 108579082 -58071214 + L2 LINE L2 2075 2549 -870 1 1413 21 0 0 0 chrX 108579115 108579136 -58071160 + AT_rich Low_complexity Low_complexity 1 21 0 1 1413 192 167 0 0 chrX 108579198 108579246 -58071050 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1413 209 30 61 0 chrX 108579912 108579945 -58070351 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1413 1118 65 0 0 chrX 108579945 108580083 -58070213 - B1_Mus2 SINE Alu -8 139 2 1 1413 250 333 97 72 chrX 108580110 108580317 -58069979 - MamSINE1 SINE tRNA -5 285 74 1 1413 714 182 36 21 chrX 108581763 108581903 -58068393 + B1_Mur1 SINE Alu 7 148 -1 1 1413 903 130 4 13 chrX 108582005 108582244 -58068052 + (TCTCC)n Simple_repeat Simple_repeat 1 236 0 1 1413 509 153 36 0 chrX 108582246 108582383 -58067913 + CT-rich Low_complexity Low_complexity 2 143 0 1 1413 312 282 94 47 chrX 108582390 108582539 -58067757 - HAL1-3A_ME LINE L1 -419 2439 2284 1 1413 212 233 14 0 chrX 108582539 108582612 -58067684 + CT-rich Low_complexity Low_complexity 3 76 0 1 1413 402 345 9 0 chrX 108582782 108582898 -58067398 - MER5A DNA MER1_type -18 171 55 1 1413 1132 82 0 0 chrX 108583127 108583274 -58067022 + B1_Mus2 SINE Alu 1 147 0 1 1413 213 65 0 0 chrX 108583274 108583305 -58066991 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1413 285 29 0 0 chrX 108583508 108583542 -58066754 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1413 283 311 51 63 chrX 108583794 108583859 -58066437 + CYRA11_Mm Unknown Y-chromosome 116 287 -329 1 1413 597 174 9 0 chrX 108583859 108583968 -58066328 - URR1B DNA MER1_type -6 219 110 1 1413 399 320 0 28 chrX 108584158 108584264 -58066032 + PB1D10 SINE Alu 7 109 -8 1 1413 275 406 0 0 chrX 108584282 108584383 -58065913 + PB1D10 SINE Alu 1 101 -16 1 1413 326 107 18 0 chrX 108584383 108584439 -58065857 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 1 1413 561 341 113 10 chrX 108584469 108584771 -58065525 - MER2 DNA MER2_type -3 342 10 1 1413 555 211 46 0 chrX 108585178 108585287 -58065009 + B1_Mus2 SINE Alu 1 114 -33 1 1413 859 271 110 14 chrX 108585293 108585707 -58064589 + L1M2 LINE L1 4786 5240 -906 1 1413 635 302 48 16 chrX 108585722 108586071 -58064225 + L1M2 LINE L1 5328 5688 -756 1 1413 297 325 0 0 chrX 108586080 108586160 -58064136 - ID4_ SINE ID -3 80 1 1 1413 313 311 0 11 chrX 108586177 108586197 -58064099 - ID_B1 SINE B4 -30 194 105 1 1413 334 229 0 14 chrX 108586197 108586268 -58064028 - PB1D10 SINE Alu -24 93 24 1 1413 235 258 50 30 chrX 108586509 108586609 -58063687 + L1M5 LINE L1 5587 5688 -491 1 1413 231 188 0 40 chrX 108586814 108586864 -58063432 + MT2B LTR ERVL 210 257 -344 1 1413 622 82 0 0 chrX 108586821 108586906 -58063390 + B1_Mus2 SINE Alu 60 144 -3 1 1413 354 45 0 0 chrX 108586906 108586950 -58063346 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1413 519 309 50 22 chrX 108587046 108587185 -58063111 + B1F1 SINE Alu 6 148 -1 1 1413 181 211 82 66 chrX 108588990 108589051 -58061245 + L3 LINE CR1 2439 2500 -1989 1 1413 22 35 0 0 chrX 108590919 108590948 -58059348 + AT_rich Low_complexity Low_complexity 1 29 0 1 1413 21 36 0 0 chrX 108591457 108591485 -58058811 + AT_rich Low_complexity Low_complexity 1 28 0 1 1413 696 240 0 0 chrX 108591485 108591631 -58058665 + B1_Mur2 SINE Alu 1 146 -3 1 1413 351 299 31 10 chrX 108591923 108592021 -58058275 + PB1 SINE Alu 26 125 -2 1 1413 432 0 0 0 chrX 108592244 108592292 -58058004 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1413 195 375 45 0 chrX 108592434 108592546 -58057750 + MIRb SINE MIR 87 203 -65 1 1413 29427 33 0 0 chrX 108592547 108596095 -58054201 + L1Md_T LINE L1 2039 5586 -297 1 1413 8887 9 0 0 chrX 108596095 108597113 -58053183 + L1Md_T LINE L1 5587 6582 0 1 1413 322 272 11 11 chrX 108597514 108597638 -58052658 - Lx5 LINE L1 -435 6615 6492 1 1413 1611 283 3 10 chrX 108597637 108598023 -58052273 + Lx6 LINE L1 7007 7389 -71 1 1413 445 288 27 0 chrX 108601102 108601213 -58049083 + PB1D10 SINE Alu 1 114 -3 1 1413 297 295 13 0 chrX 108601218 108601296 -58049000 + ID4 SINE ID 4 82 -1 1 1413 362 324 37 0 chrX 108601478 108601586 -58048710 - PB1D7 SINE Alu -8 112 1 1 1413 24 32 0 0 chrX 108601597 108601628 -58048668 + AT_rich Low_complexity Low_complexity 1 31 0 1 1413 191 382 35 26 chrX 108602268 108602381 -58047915 - MIRb SINE MIR -47 221 108 1 1413 267 299 167 9 chrX 108604411 108604519 -58045777 - Tigger5 DNA MER2_type 0 2406 2282 1 1413 597 286 108 31 chrX 108604504 108604699 -58045597 - Tigger5 DNA MER2_type -2196 210 1 1 1413 31 82 0 0 chrX 108604990 108605063 -58045233 + AT_rich Low_complexity Low_complexity 1 73 0 1 1413 497 16 16 0 chrX 108605254 108605316 -58044980 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 1413 209 294 35 23 chrX 108605451 108605538 -58044758 - L3b LINE CR1 -301 181 94 1 1413 1104 330 10 7 chrX 108609684 108609989 -58040307 + MTE2b LTR MaLR 1 306 -73 1 1413 2060 328 40 23 chrX 108610000 108610829 -58039467 + Lx8 LINE L1 6497 7339 -134 1 1413 718 141 62 0 chrX 108610883 108611041 -58039255 + Lx LINE L1 6417 6529 -125 1 1413 7712 102 25 8 chrX 108611035 108611252 -58039044 + Lx LINE L1 5587 5810 -549 1 1413 279 0 0 0 chrX 108611252 108611283 -58039013 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1413 7712 88 16 2 chrX 108611283 108612140 -58038156 + Lx LINE L1 5785 6653 -1 1 1413 27 0 0 0 chrX 108612228 108612255 -58038041 + AT_rich Low_complexity Low_complexity 1 27 0 1 1413 227 79 0 26 chrX 108612282 108612321 -58037975 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1413 325 171 132 0 chrX 108612381 108612457 -58037839 + MTE2b LTR MaLR 294 379 0 1 1413 1074 305 27 27 chrX 108614062 108614436 -58035860 + Lx8 LINE L1 6583 6956 -517 1 1413 695 288 33 9 chrX 108614741 108614951 -58035345 - B3 SINE B2 0 216 2 1 1413 487 163 243 7 chrX 108616633 108616738 -58033558 - Lx9 LINE L1 -9 7635 7525 1 1413 246 32 0 0 chrX 108616738 108616769 -58033527 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1 1413 487 163 243 7 chrX 108616769 108616811 -58033485 - Lx9 LINE L1 -120 7524 7453 1 1413 4511 118 34 16 chrX 108617022 108618003 -58032293 + L1_Mus4 LINE L1 5587 6649 -5 1 1413 1082 97 0 7 chrX 108618104 108618249 -58032047 + B1_Mm SINE Alu 2 145 -2 1 1413 308 48 81 0 chrX 108618254 108618316 -58031980 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 1 1413 3383 46 5 0 chrX 108618387 108618799 -58031497 - L1_Mus2 LINE L1 -1 6565 6152 1 1413 244 75 24 24 chrX 108619230 108619271 -58031025 - L1MA9 LINE L1 -383 5929 5889 1 1413 841 96 24 0 chrX 108619926 108620051 -58030245 + B1_Mus1 SINE Alu 1 128 -20 1 1413 1163 43 0 0 chrX 108620219 108620360 -58029936 + B1_Mus1 SINE Alu 2 142 -6 2 1413 911 220 81 0 chrX 108620952 108621138 -58029158 + B3 SINE B2 3 203 -13 2 1413 188 333 51 13 chrX 108621161 108621240 -58029056 + MIRb SINE MIR 78 159 -109 2 1413 198 118 0 0 chrX 108621456 108621490 -58028806 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1413 693 140 7 14 chrX 108621502 108621640 -58028656 + (TA)n Simple_repeat Simple_repeat 2 138 0 2 1413 980 264 114 3 chrX 108621641 108622009 -58028287 - L1_Rod LINE L1 -3198 2649 2241 2 1413 1652 211 70 16 chrX 108622012 108622398 -58027898 + L1_Rod LINE L1 5323 5729 -118 2 1413 7514 122 37 13 chrX 108622393 108623610 -58026686 + Lx3C LINE L1 5614 6859 -117 2 1413 36 40 0 0 chrX 108623624 108623674 -58026622 + AT_rich Low_complexity Low_complexity 1 50 0 2 1413 237 177 77 46 chrX 108627183 108627248 -58023048 + L3 LINE CR1 3240 3306 -1183 2 1413 242 284 147 0 chrX 108627426 108627616 -58022680 + L3 LINE CR1 3555 3772 -717 2 1413 769 322 19 5 chrX 108627741 108627956 -58022340 + ID_B1 SINE B4 7 224 0 2 1413 410 320 10 0 chrX 108628559 108628662 -58021634 - B1F1 SINE Alu -45 104 1 2 1413 267 243 57 0 chrX 108629428 108629498 -58020798 + ID4 SINE ID 2 75 -8 2 1413 344 228 24 20 chrX 108629740 108629848 -58020448 + MIR SINE MIR 6 116 -152 2 1413 191 308 0 0 chrX 108629871 108629923 -58020373 + MIRc SINE MIR 213 264 -4 2 1413 281 321 24 0 chrX 108630313 108630397 -58019899 + (CACG)n Simple_repeat Simple_repeat 2 87 0 2 1413 1277 161 5 5 chrX 108631677 108631901 -58018395 + URR1B DNA MER1_type 2 225 0 2 1413 236 288 0 0 chrX 108632162 108632221 -58018075 + L2b LINE L2 3317 3375 0 2 1413 231 125 0 0 chrX 108632668 108632708 -58017588 + (TGAA)n Simple_repeat Simple_repeat 4 43 0 2 1413 346 241 0 12 chrX 108633034 108633114 -58017182 + RSINE1 SINE B4 2 80 -85 2 1413 258 32 0 0 chrX 108633140 108633171 -58017125 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 2 1413 1015 89 36 54 chrX 108634060 108634227 -58016069 + B2_Mm2 SINE B2 1 164 -31 2 1413 412 380 9 9 chrX 108634979 108635210 -58015086 + L2 LINE L2 2262 2492 -927 2 1413 294 301 12 0 chrX 108635288 108635371 -58014925 - PB1D10 SINE Alu -3 114 31 2 1413 261 318 0 43 chrX 108635600 108635669 -58014627 + PB1D9 SINE Alu 1 66 -54 2 1413 198 191 0 0 chrX 108635917 108635959 -58014337 + (TAA)n Simple_repeat Simple_repeat 2 43 0 2 1413 391 332 100 5 chrX 108636070 108636270 -58014026 + MIRb SINE MIR 36 254 -14 2 1413 488 184 44 7 chrX 108636309 108636446 -58013850 - L1M4b LINE L1 -2977 4029 3888 2 1413 451 234 26 47 chrX 108636538 108636765 -58013531 - L1M4b LINE L1 -3104 3902 3694 2 1413 560 225 75 0 chrX 108636828 108636948 -58013348 - B3 SINE B2 -86 130 2 2 1413 51 17 0 0 chrX 108636948 108637006 -58013290 + AT_rich Low_complexity Low_complexity 1 58 0 2 1413 288 242 75 36 chrX 108637006 108637145 -58013151 - L1M4b LINE L1 -3782 3224 3094 2 1413 518 313 0 0 chrX 108637162 108637293 -58013003 + B1F SINE Alu 18 148 -1 2 1413 1249 81 41 0 chrX 108637301 108637473 -58012823 + B2_Mm2 SINE B2 3 181 -14 2 1413 525 46 0 0 chrX 108637501 108637566 -58012730 + B2_Mm1a SINE B2 91 155 -38 2 1413 225 65 0 0 chrX 108637567 108637598 -58012698 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 2 1413 361 218 95 5 chrX 108637599 108637744 -58012552 - L1M4c LINE L1 -3592 2491 2336 2 1413 695 317 28 20 chrX 108637761 108637834 -58012462 - Lx8 LINE L1 -4 7469 7398 2 1413 1227 94 39 0 chrX 108637834 108638015 -58012281 - B2_Mm2 SINE B2 -5 190 3 2 1413 695 317 28 20 chrX 108638015 108638195 -58012101 - Lx8 LINE L1 -76 7397 7214 2 1413 354 61 0 0 chrX 108638210 108638259 -58012037 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1413 532 269 58 0 chrX 108638266 108638474 -58011822 - L1M4c LINE L1 -4086 2298 2079 2 1413 31 26 0 0 chrX 108638509 108638547 -58011749 + AT_rich Low_complexity Low_complexity 1 38 0 2 1413 320 321 17 73 chrX 108638575 108638864 -58011432 - L1M4c LINE L1 -4481 1903 1631 2 1413 352 259 156 5 chrX 108638991 108639177 -58011119 + HAL1b LINE L1 572 785 -1224 2 1413 469 300 51 45 chrX 108639591 108639748 -58010548 - RSINE1 SINE B4 0 165 8 2 1413 208 229 21 0 chrX 108639753 108639801 -58010495 + CT-rich Low_complexity Low_complexity 4 52 0 2 1413 306 281 22 11 chrX 108639826 108639916 -58010380 - PB1D10 SINE Alu -1 116 26 2 1413 268 307 56 81 chrX 108639945 108640179 -58010117 + HAL1b LINE L1 1204 1431 -578 2 1413 29 60 0 0 chrX 108640188 108640238 -58010058 + AT_rich Low_complexity Low_complexity 1 50 0 2 1413 25 65 0 0 chrX 108642351 108642397 -58007899 + AT_rich Low_complexity Low_complexity 1 46 0 2 1413 233 179 14 43 chrX 108642729 108642799 -58007497 + (TAAA)n Simple_repeat Simple_repeat 4 71 0 2 1413 299 277 134 0 chrX 108642825 108642937 -58007359 + MIR SINE MIR 18 144 -64 2 1413 298 345 9 35 chrX 108643230 108643344 -58006952 + PB1D10 SINE Alu 1 111 -6 2 1413 245 282 42 0 chrX 108643782 108643853 -58006443 + ID4 SINE ID 2 75 -8 2 1413 798 296 77 0 chrX 108643968 108644242 -58006054 - MER2 DNA MER2_type -48 297 3 2 1413 944 77 0 7 chrX 108644424 108644568 -58005728 + (GA)n Simple_repeat Simple_repeat 1 143 0 2 1413 261 139 0 0 chrX 108645936 108645979 -58004317 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1413 285 75 0 0 chrX 108646015 108646055 -58004241 + (T)n Simple_repeat Simple_repeat 1 40 0 2 1413 244 325 0 25 chrX 108646394 108646473 -58003823 - ID4 SINE ID -5 78 2 2 1413 384 179 59 12 chrX 108646719 108647061 -58003235 + (TA)n Simple_repeat Simple_repeat 1 358 0 2 1413 530 267 17 0 chrX 108647130 108647246 -58003050 - B1F SINE Alu -31 118 1 2 1413 285 362 63 35 chrX 108647246 108647284 -58003012 - B4A SINE B4 -201 91 50 2 1413 1216 54 0 0 chrX 108647379 108647526 -58002770 - B1_Mm SINE Alu 0 147 1 2 1413 1222 126 20 26 chrX 108647532 108647727 -58002569 - B2_Mm2 SINE B2 0 195 2 2 1413 1472 127 66 16 chrX 108647833 108647968 -58002328 + Lx LINE L1 6385 6518 -136 2 1413 207 0 0 0 chrX 108647968 108647991 -58002305 + (TGGG)n Simple_repeat Simple_repeat 2 24 0 2 1413 1472 127 66 16 chrX 108647991 108648112 -58002184 + Lx LINE L1 6519 6654 0 2 1413 843 206 0 0 chrX 108648122 108648302 -58001994 + GA-rich Low_complexity Low_complexity 1 180 0 2 1413 960 167 26 21 chrX 108648313 108648503 -58001793 + B2_Mm2 SINE B2 1 191 -4 2 1413 689 171 5 106 chrX 108648946 108649135 -58001161 + Lx2 LINE L1 6822 6991 -6 2 1413 212 356 0 27 chrX 108649441 108649516 -58000780 - PB1D7 SINE Alu -21 99 27 2 1413 283 323 35 47 chrX 108649503 108649672 -58000624 + ID_B1 SINE B4 50 216 -8 2 1413 297 312 45 9 chrX 108651135 108651245 -57999051 + Arthur1B DNA Tip100 35 148 -1077 2 1413 32 26 0 0 chrX 108652333 108652372 -57997924 + AT_rich Low_complexity Low_complexity 1 39 0 2 1413 317 277 144 3 chrX 108652456 108652844 -57997452 + L1MC4a LINE L1 7066 7571 -311 2 1413 269 286 2 95 chrX 108652897 108652943 -57997353 + MT2B LTR ERVL 123 156 -428 2 1413 521 226 0 0 chrX 108652943 108653036 -57997260 + PB1D9 SINE Alu 2 94 -26 2 1413 216 0 0 0 chrX 108653038 108653062 -57997234 + (TC)n Simple_repeat Simple_repeat 1 24 0 2 1413 433 248 86 0 chrX 108655710 108655815 -57994481 - PB1D7 SINE Alu -4 116 3 2 1413 407 268 88 9 chrX 108655839 108655952 -57994344 - ID_B1 SINE B4 -13 211 90 2 1413 1068 289 4 30 chrX 108657564 108657633 -57992663 + B4 SINE B4 7 75 -217 2 1413 261 0 0 0 chrX 108657633 108657662 -57992634 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1413 1068 289 4 30 chrX 108657662 108657863 -57992433 + B4 SINE B4 76 270 -22 2 1413 386 53 18 0 chrX 108657864 108657921 -57992375 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 1413 295 319 22 0 chrX 108657988 108658079 -57992217 + MIR SINE MIR 124 216 -46 2 1413 564 319 12 10 chrX 108658208 108658383 -57991913 + ID_B1 SINE B4 82 262 -30 2 1413 285 312 108 0 chrX 108658477 108658570 -57991726 - PB1D10 SINE Alu -11 106 4 2 1414 421 283 37 28 chrX 108658898 108659007 -57991289 - B1_Mur1 SINE Alu -39 110 1 2 1414 554 323 60 82 chrX 108660236 108660603 -57989693 + ORR1E LTR MaLR 1 359 0 2 1414 195 186 0 0 chrX 108661048 108661091 -57989205 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1414 453 235 118 0 chrX 108661104 108661206 -57989090 - B1F SINE Alu -1 148 35 2 1414 343 249 52 83 chrX 108661405 108661598 -57988698 + L1M3 LINE L1 4507 4693 -1447 2 1414 483 18 0 0 chrX 108661613 108661669 -57988627 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 1414 5113 109 18 12 chrX 108662266 108663039 -57987257 + Lx3B LINE L1 6192 6969 -4 2 1414 297 0 0 0 chrX 108663209 108663242 -57987054 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 1414 242 231 0 71 chrX 108663374 108663444 -57986852 - L2c LINE L2 -8 3379 3315 2 1414 453 147 53 0 chrX 108665205 108665280 -57985016 - B1_Mus2 SINE Alu -4 143 65 2 1414 217 352 0 70 chrX 108665379 108665535 -57984761 - ID_B1 SINE B4 0 224 80 2 1414 207 100 0 0 chrX 108665537 108665567 -57984729 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 2 1414 1459 93 14 9 chrX 108666240 108666457 -57983839 - L1_Mus3 LINE L1 -248 6390 6173 2 1414 4611 203 34 50 chrX 108666822 108667907 -57982389 - Lx5 LINE L1 0 7050 5983 2 1414 508 200 142 181 chrX 108667909 108667975 -57982321 - URR1B DNA MER1_type -8 217 154 2 1414 1323 66 22 11 chrX 108667975 108668159 -57982137 - B2_Mm2 SINE B2 -9 186 1 2 1414 508 200 142 181 chrX 108668159 108668193 -57982103 - URR1B DNA MER1_type -72 153 153 2 1414 2211 85 6 25 chrX 108668193 108668517 -57981779 - L1_Mus3 LINE L1 -1 6637 6320 2 1414 508 200 142 181 chrX 108668517 108668641 -57981655 - URR1B DNA MER1_type -72 153 1 2 1414 711 300 86 45 chrX 108668666 108668886 -57981410 + B4A SINE B4 52 280 -12 2 1414 230 340 73 67 chrX 108668870 108669034 -57981262 - RMER12 LTR ERVK -447 875 711 2 1414 283 321 0 0 chrX 108669481 108669562 -57980734 - ID4_ SINE ID 0 83 3 2 1414 4231 87 12 3 chrX 108670137 108670716 -57979580 + MT2B2 LTR ERVL 1 584 0 2 1414 9717 147 28 25 chrX 108670716 108672411 -57977885 + MERVL-int LTR ERVL 1 1738 -3747 2 1414 2142 108 16 3 chrX 108672413 108672728 -57977568 - ORR1A2 LTR MaLR -8 319 1 3 1414 21577 95 25 3 chrX 108672729 108675696 -57974600 + MERVL-int LTR ERVL 1734 4766 -719 2 1414 214 244 0 0 chrX 108675809 108675850 -57974446 - ID2 SINE ID -40 43 3 3 1414 1236 295 59 21 chrX 108675886 108676361 -57973935 + Lx9 LINE L1 6759 7251 -393 3 1414 501 129 44 82 chrX 108676376 108676511 -57973785 - Lx9 LINE L1 -2 7642 7513 3 1414 826 228 107 0 chrX 108676555 108676770 -57973526 + MTD LTR MaLR 182 419 0 3 1414 382 347 40 7 chrX 108676770 108676916 -57973380 + RMER15 LTR ERVL 425 575 0 3 1414 555 43 0 0 chrX 108676980 108677050 -57973246 + (TTTC)n Simple_repeat Simple_repeat 2 71 0 3 1414 381 312 24 0 chrX 108677067 108677168 -57973128 - B1F SINE Alu -44 105 3 3 1414 1297 87 11 21 chrX 108678317 108678506 -57971790 - B2_Mm1t SINE B2 -6 187 1 3 1414 1166 205 28 20 chrX 108678609 108678863 -57971433 - Lx5 LINE L1 0 7050 6795 3 1414 25 0 0 0 chrX 108678897 108678922 -57971374 + AT_rich Low_complexity Low_complexity 1 25 0 3 1414 10248 74 26 3 chrX 108678923 108680492 -57969804 - Lx3_Mus LINE L1 0 7009 5407 3 1414 2716 91 3 5 chrX 108680495 108680883 -57969413 - L1_Mus4 LINE L1 -8 6628 6242 3 1414 1213 78 0 0 chrX 108680883 108681037 -57969259 + L1_Mus4 LINE L1 6104 6257 -379 3 1414 1025 205 53 14 chrX 108681267 108681475 -57968821 - B3 SINE B2 0 216 1 3 1414 441 339 51 6 chrX 108681492 108681667 -57968629 - B3A SINE B2 -14 184 2 3 1414 276 287 148 0 chrX 108682374 108682475 -57967821 + PB1D10 SINE Alu 2 117 0 3 1414 1199 159 24 28 chrX 108682481 108682694 -57967602 + B3 SINE B2 5 216 0 3 1414 21 57 0 0 chrX 108682712 108682747 -57967549 + AT_rich Low_complexity Low_complexity 1 35 0 3 1414 235 196 19 38 chrX 108684961 108685014 -57965282 - tRNA-Ala-GCY_ tRNA tRNA -5 70 19 3 1414 216 0 0 0 chrX 108685014 108685038 -57965258 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 1414 480 128 0 0 chrX 108685641 108685719 -57964577 + (GGA)n Simple_repeat Simple_repeat 2 79 0 3 1414 231 146 0 0 chrX 108686607 108686648 -57963648 + (GAA)n Simple_repeat Simple_repeat 1 41 0 3 1414 183 42 0 0 chrX 108688282 108688306 -57961990 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 1414 532 308 8 0 chrX 108688985 108689118 -57961178 + ID_B1 SINE B4 81 214 -10 3 1414 22 0 0 0 chrX 108689894 108689916 -57960380 + AT_rich Low_complexity Low_complexity 1 22 0 3 1414 261 333 0 14 chrX 108692776 108692849 -57957447 - ID4_ SINE ID -11 72 1 3 1414 216 338 18 26 chrX 108693001 108693087 -57957209 - MIRb SINE MIR -101 167 75 3 1414 747 61 0 34 chrX 108693430 108693549 -57956747 + L1Md_F2 LINE L1 6462 6576 -6 3 1414 462 101 0 0 chrX 108693581 108693650 -57956646 + (TA)n Simple_repeat Simple_repeat 1 69 0 3 1414 429 316 9 9 chrX 108694296 108694411 -57955885 - PB1D7 SINE Alu 0 120 6 3 1414 5698 55 1 3 chrX 108694603 108695354 -57954942 - L1_Mus1 LINE L1 0 6567 5847 3 1414 207 0 0 0 chrX 108695742 108695765 -57954531 + (TTATA)n Simple_repeat Simple_repeat 3 25 0 3 1414 343 277 314 1 chrX 108697248 108697570 -57952726 + L1M5 LINE L1 5323 5745 -699 3 1414 824 301 83 25 chrX 108697577 108697891 -57952405 + ORR1E LTR MaLR 28 359 0 3 1414 210 200 0 0 chrX 108698099 108698144 -57952152 + B1F SINE Alu 96 140 -9 3 1414 749 255 22 35 chrX 108698168 108698408 -57951888 - L1MA7 LINE L1 -239 6052 5815 3 1414 485 278 28 0 chrX 108698444 108698620 -57951676 + L1MA7 LINE L1 6111 6291 0 3 1414 28 48 0 0 chrX 108698620 108698662 -57951634 + AT_rich Low_complexity Low_complexity 1 42 0 3 1414 617 97 19 34 chrX 108699084 108699283 -57951013 + L1_Mus2 LINE L1 6322 6582 0 3 1414 258 276 11 33 chrX 108699371 108699461 -57950835 + (TATG)n Simple_repeat Simple_repeat 4 91 0 3 1414 950 243 106 4 chrX 108699470 108699734 -57950562 - B4A SINE B4 0 292 2 3 1414 452 283 19 0 chrX 108699765 108699871 -57950425 - ID_B1 SINE B4 0 224 117 3 1414 371 319 0 0 chrX 108701629 108701742 -57948554 - PB1D7 SINE Alu -7 113 1 3 1414 335 339 46 0 chrX 108702425 108702534 -57947762 - PB1 SINE Alu 0 127 14 3 1414 468 0 0 0 chrX 108703117 108703169 -57947127 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1414 252 0 0 0 chrX 108703872 108703900 -57946396 + (TCTA)n Simple_repeat Simple_repeat 1 28 0 3 1414 279 0 0 0 chrX 108703903 108703934 -57946362 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1414 4526 46 12 0 chrX 108705163 108705723 -57944573 - L1Md_F3 LINE L1 -2 6582 6016 3 1414 2346 84 15 6 chrX 108705846 108706170 -57944126 + ORR1A2 LTR MaLR 1 327 0 3 1414 207 194 0 0 chrX 108706960 108706996 -57943300 + (CATATA)n Simple_repeat Simple_repeat 6 41 0 3 1414 26 74 0 0 chrX 108707072 108707126 -57943170 + AT_rich Low_complexity Low_complexity 1 54 0 3 1414 201 138 0 0 chrX 108707159 108707188 -57943108 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 3 1414 405 349 0 20 chrX 108707188 108707340 -57942956 - B1F2 SINE Alu 0 149 1 3 1414 1205 54 0 0 chrX 108707542 108707689 -57942607 + B1_Mus1 SINE Alu 2 148 0 3 1414 877 118 19 7 chrX 108707699 108707764 -57942532 + (GGAGAA)n Simple_repeat Simple_repeat 5 69 0 3 1414 1113 128 0 0 chrX 108707764 108707944 -57942352 + (GGA)n Simple_repeat Simple_repeat 1 180 0 3 1414 877 118 19 7 chrX 108707944 108708032 -57942264 + (GGAGAA)n Simple_repeat Simple_repeat 4 94 0 3 1414 27 0 0 0 chrX 108708111 108708138 -57942158 + AT_rich Low_complexity Low_complexity 1 27 0 3 1414 21 0 0 0 chrX 108708613 108708634 -57941662 + AT_rich Low_complexity Low_complexity 1 21 0 3 1414 552 280 91 11 chrX 108708634 108708898 -57941398 - L1MA9 LINE L1 -38 6274 5990 3 1414 579 129 16 72 chrX 108708948 108709073 -57941223 + L1MA9 LINE L1 5829 5946 -366 3 1414 414 0 0 0 chrX 108709547 108709593 -57940703 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1414 248 233 14 0 chrX 108711229 108711302 -57938994 + GA-rich Low_complexity Low_complexity 1 74 0 3 1414 304 351 65 65 chrX 108711913 108712066 -57938230 + L1M5 LINE L1 4686 4821 -1325 3 1414 297 0 0 0 chrX 108712066 108712099 -57938197 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 1414 304 351 65 65 chrX 108712099 108712418 -57937878 + L1M5 LINE L1 4822 5158 -988 3 1414 291 189 0 129 chrX 108713023 108713108 -57937188 + B4A SINE B4 1 74 -218 3 1414 231 317 99 15 chrX 108713356 108713619 -57936677 + L1MB8 LINE L1 5894 6178 0 3 1414 240 386 21 21 chrX 108713761 108713904 -57936392 - MIRc SINE MIR -123 145 3 3 1414 207 111 0 27 chrX 108714614 108714651 -57935645 + (TTTTTG)n Simple_repeat Simple_repeat 4 39 0 3 1414 240 100 0 0 chrX 108714837 108714877 -57935419 + (TTTTTG)n Simple_repeat Simple_repeat 4 43 0 3 1414 225 273 197 0 chrX 108714877 108714943 -57935353 - ID4_ SINE ID 0 83 5 3 1414 593 289 0 7 chrX 108714959 108715109 -57935187 - B1F SINE Alu 0 149 1 3 1414 615 280 0 0 chrX 108715222 108715347 -57934949 + B1F1 SINE Alu 3 127 -22 3 1414 486 0 0 0 chrX 108715347 108715401 -57934895 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 1414 240 250 13 26 chrX 108715425 108715503 -57934793 - L1M5 LINE L1 -711 5733 5657 3 1414 1113 43 0 7 chrX 108715629 108715769 -57934527 + B1_Mm SINE Alu 1 139 -8 3 1414 180 0 0 0 chrX 108715769 108715789 -57934507 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1414 359 324 113 28 chrX 108715791 108716004 -57934292 - L1MD LINE L1 -745 5401 5171 3 1414 2230 265 138 19 chrX 108716038 108717063 -57933233 + Lx8 LINE L1 6288 7444 -29 3 1414 239 248 127 8 chrX 108717066 108717184 -57933112 + Lx8 LINE L1 7337 7468 -5 3 1414 831 262 75 10 chrX 108717233 108717541 -57932755 + L1MD LINE L1 3203 3530 -2616 3 1414 503 257 92 128 chrX 108717538 108717867 -57932429 + L1MD LINE L1 4014 4353 -1793 3 1414 512 218 9 18 chrX 108717867 108717979 -57932317 + PB1D9 SINE Alu 3 113 -7 3 1414 503 257 92 128 chrX 108717979 108718035 -57932261 + L1MD LINE L1 4354 4384 -1762 3 1414 303 278 69 0 chrX 108718035 108718107 -57932189 - ID4_ SINE ID -2 81 5 3 1414 503 257 92 128 chrX 108718107 108718188 -57932108 + L1MD LINE L1 4385 4464 -1682 3 1414 252 246 13 127 chrX 108718204 108718283 -57932013 - RSINE1 SINE B4 0 165 96 3 1414 411 344 30 48 chrX 108718256 108718421 -57931875 - B4 SINE B4 -129 163 2 3 1414 382 309 41 54 chrX 108718496 108718527 -57931769 - B4 SINE B4 -39 253 217 3 1414 352 285 137 8 chrX 108718527 108718658 -57931638 - B1_Mur2 SINE Alu 0 149 2 3 1414 382 309 41 54 chrX 108718658 108718773 -57931523 - B4 SINE B4 -76 216 109 3 1414 270 0 0 0 chrX 108718774 108718804 -57931492 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1414 890 276 68 42 chrX 108718841 108719177 -57931119 - Lx8 LINE L1 0 7473 7129 3 1414 282 29 0 0 chrX 108719213 108719248 -57931048 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1414 208 162 27 0 chrX 108720011 108720048 -57930248 + GA-rich Low_complexity Low_complexity 2 39 0 3 1414 768 318 77 47 chrX 108720386 108720726 -57929570 + MLT1A0 LTR MaLR 2 351 -14 3 1414 308 295 53 8 chrX 108720723 108720856 -57929440 + MLT2B1 LTR ERVL 15 153 -367 3 1414 186 43 0 0 chrX 108720966 108720989 -57929307 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 3 1414 1257 211 129 19 chrX 108721065 108721375 -57928921 + MTD LTR MaLR 76 419 0 3 1414 581 208 92 0 chrX 108721532 108721662 -57928634 - B1_Mur1 SINE Alu -7 142 1 3 1414 197 273 36 0 chrX 108721685 108721740 -57928556 + MIR SINE MIR 90 146 -62 3 1414 212 139 0 44 chrX 108721985 108722030 -57928266 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 1414 489 279 25 0 chrX 108722379 108722501 -57927795 - B1_Mur1 SINE Alu -6 143 19 3 1414 460 336 17 110 chrX 108722501 108722613 -57927683 - ID_B1 SINE B4 -3 218 7 3 1414 440 254 139 51 chrX 108722773 108722910 -57927386 + B1F SINE Alu 1 149 0 4 1414 208 292 0 20 chrX 108723317 108723383 -57926913 + L2b LINE L2 3321 3387 0 4 1414 779 306 102 20 chrX 108723513 108723816 -57926480 + MER44A DNA MER2_type 2 329 -10 4 1414 1113 132 34 6 chrX 108724109 108724284 -57926012 + Lx3B LINE L1 6711 6890 -83 4 1414 26 0 0 0 chrX 108724296 108724322 -57925974 + AT_rich Low_complexity Low_complexity 1 26 0 4 1414 317 310 138 46 chrX 108724750 108724946 -57925350 + HAL1 LINE L1 1819 2032 -475 4 1414 298 333 46 39 chrX 108724953 108724975 -57925321 + ID_B1 SINE B4 70 223 -1 4 1414 440 290 76 0 chrX 108724975 108725106 -57925190 + B1F1 SINE Alu 9 149 0 4 1414 9642 116 21 13 chrX 108725111 108726884 -57923412 + L1VL2 LINE L1 94 1879 -1736 4 1414 3083 72 2 9 chrX 108726884 108727305 -57922991 - L1Md_F2 LINE L1 0 6582 6165 4 1414 9642 88 20 20 chrX 108727305 108727835 -57922461 + L1VL2 LINE L1 1880 2413 -1202 4 1414 7348 115 7 8 chrX 108727804 108729653 -57920643 + L1_Mus3 LINE L1 4792 6637 -1 4 1414 584 356 17 6 chrX 108729788 108729969 -57920327 - 7SK RNA RNA -103 228 46 4 1414 433 338 70 60 chrX 108730195 108730494 -57919802 + MLT1J LTR MaLR 14 315 -197 4 1414 342 116 314 0 chrX 108730764 108730850 -57919446 + RMER13B LTR ERVK 16 128 -780 4 1414 2464 288 124 50 chrX 108730855 108732035 -57918261 + Lx9 LINE L1 6358 7624 -20 4 1414 264 30 0 0 chrX 108732054 108732087 -57918209 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1414 428 318 30 67 chrX 108732097 108732232 -57918064 - RSINE1 SINE B4 -13 152 23 4 1414 5019 159 38 33 chrX 108732351 108733268 -57917028 + Lx5 LINE L1 6126 7047 -3 4 1414 309 109 0 0 chrX 108734057 108734103 -57916193 + (TATG)n Simple_repeat Simple_repeat 2 47 0 4 1414 1138 55 0 0 chrX 108734104 108734249 -57916047 - B1_Mus1 SINE Alu -2 146 2 4 1414 4067 206 85 26 chrX 108734283 108735726 -57914570 + Lx5 LINE L1 5479 7050 0 4 1414 197 132 26 0 chrX 108735728 108735766 -57914530 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 4 1414 617 84 0 27 chrX 108736210 108736320 -57913976 + L1Md_F2 LINE L1 6462 6568 -14 4 1414 234 0 0 0 chrX 108736372 108736398 -57913898 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1414 655 299 62 29 chrX 108737221 108737431 -57912865 + B4 SINE B4 1 217 -75 4 1414 207 173 0 0 chrX 108737517 108737569 -57912727 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1414 196 291 34 62 chrX 108738050 108738192 -57912104 - MIR SINE MIR -49 219 81 4 1414 224 268 27 32 chrX 108738359 108738501 -57911795 + GA-rich Low_complexity Low_complexity 1 141 0 4 1414 542 41 0 14 chrX 108738501 108738575 -57911721 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 4 1414 486 258 136 40 chrX 108738906 108739104 -57911192 + RMER15 LTR ERVL 344 560 -15 4 1414 21 36 0 0 chrX 108739203 108739231 -57911065 + AT_rich Low_complexity Low_complexity 1 28 0 4 1414 808 308 14 5 chrX 108739283 108739495 -57910801 + B4A SINE B4 2 215 -77 4 1414 538 318 19 9 chrX 108739575 108739788 -57910508 + B3 SINE B2 2 216 0 4 1414 201 283 0 0 chrX 108740944 108740997 -57909299 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 1414 186 133 0 0 chrX 108741054 108741084 -57909212 + (TA)n Simple_repeat Simple_repeat 2 31 0 4 1414 306 310 34 11 chrX 108741183 108741271 -57909025 - PB1D7 SINE Alu -29 91 2 4 1414 399 266 59 169 chrX 108741274 108741564 -57908732 - L1MB1 LINE L1 -242 5947 5690 4 1414 453 270 102 19 chrX 108741622 108741784 -57908512 - B3A SINE B2 -27 168 1 4 1414 660 310 108 4 chrX 108741967 108742207 -57908089 - LTR53 LTR ERVL -2 517 253 4 1414 3771 138 35 16 chrX 108742415 108743048 -57907248 - Lx2B LINE L1 -2 6998 6354 4 1414 4622 138 20 69 chrX 108743048 108743409 -57906887 + Lx2 LINE L1 5432 5790 -93 4 1414 1168 81 0 0 chrX 108743409 108743557 -57906739 + B1_Mus1 SINE Alu 1 148 0 4 1414 4622 122 35 55 chrX 108743557 108744157 -57906139 + Lx2 LINE L1 5788 6377 -620 4 1414 1334 94 20 16 chrX 108744207 108744497 -57905799 - L1_Mus3 LINE L1 -55 6583 6253 4 1414 241 245 0 0 chrX 108744633 108744686 -57905610 + MLT2B4 LTR ERVL 435 487 -69 4 1414 306 273 71 0 chrX 108745473 108745572 -57904724 - Tigger5 DNA MER2_type -9 2397 2292 4 1414 709 296 34 38 chrX 108745567 108745806 -57904490 - Tigger5 DNA MER2_type -2163 243 7 4 1414 323 285 105 20 chrX 108746012 108746159 -57904137 + MIRm SINE MIR 28 192 -70 4 1414 1442 60 38 0 chrX 108746167 108746352 -57903944 + B2_Mm2 SINE B2 1 192 -3 4 1414 180 0 0 0 chrX 108746356 108746376 -57903920 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 1414 6781 104 64 12 chrX 108746605 108747699 -57902597 + Lx2 LINE L1 5847 6997 0 4 1414 771 296 72 75 chrX 108748664 108749249 -57901047 + L1M3 LINE L1 3317 3899 -2241 4 1414 2111 87 0 16 chrX 108749715 108750019 -57900277 + L1Md_F2 LINE L1 6271 6569 -13 4 1414 21 36 0 0 chrX 108750182 108750210 -57900086 + AT_rich Low_complexity Low_complexity 1 28 0 4 1414 289 367 9 0 chrX 108750384 108750493 -57899803 - PB1 SINE Alu -14 113 4 4 1414 321 213 0 0 chrX 108750714 108750775 -57899521 - ID SINE ID -161 63 3 4 1414 484 250 18 27 chrX 108750787 108750898 -57899398 - B1_Mur1 SINE Alu -6 143 34 4 1414 199 143 40 20 chrX 108751574 108751624 -57898672 + GA-rich Low_complexity Low_complexity 3 53 0 4 1414 205 368 47 9 chrX 108751750 108751857 -57898439 + MIRc SINE MIR 107 217 -51 4 1414 377 260 43 55 chrX 108751867 108751981 -57898315 + L1M2 LINE L1 5104 5213 -930 4 1414 1009 56 38 238 chrX 108751981 108752216 -57898080 + B2_Mm1a SINE B2 2 189 -4 4 1414 377 260 43 55 chrX 108752216 108752357 -57897939 + L1M2 LINE L1 5214 5356 -787 4 1414 447 284 104 6 chrX 108752389 108752552 -57897744 - RMER15 LTR ERVL -15 560 382 4 1414 5781 39 1 3 chrX 108752557 108753255 -57897041 + L1Md_F2 LINE L1 5884 6580 -2 4 1414 215 130 0 18 chrX 108753618 108753673 -57896623 + (CAAAAA)n Simple_repeat Simple_repeat 4 57 0 4 1414 238 112 18 0 chrX 108753673 108753720 -57896576 + L1M2 LINE L1 5386 5436 -855 4 1414 1833 228 67 47 chrX 108755296 108756096 -57894200 + L1_Mur3 LINE L1 926 1747 -4133 4 1414 548 136 82 0 chrX 108756125 108756235 -57894061 - Lx LINE L1 -5 6649 6531 4 1414 697 268 19 53 chrX 108756236 108756445 -57893851 - B3 SINE B2 -14 202 1 4 1414 1332 248 27 0 chrX 108756515 108756850 -57893446 + L1_Mur3 LINE L1 2466 2809 -3071 4 1414 23 33 0 0 chrX 108756972 108757002 -57893294 + AT_rich Low_complexity Low_complexity 1 30 0 4 1414 2716 101 81 5 chrX 108757005 108757425 -57892871 - Lx3A LINE L1 -9 6972 6521 4 1414 2935 34 0 0 chrX 108757971 108758321 -57891975 - L1Md_T LINE L1 0 6582 6233 4 1414 21 0 0 0 chrX 108758949 108758970 -57891326 + AT_rich Low_complexity Low_complexity 1 21 0 4 1414 1089 107 13 0 chrX 108759455 108759614 -57890682 + B2_Mm2 SINE B2 1 161 -34 4 1414 237 83 0 0 chrX 108759614 108759650 -57890646 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 4 1414 7864 141 70 17 chrX 108759654 108761290 -57889006 + Lx2 LINE L1 5130 6911 -86 4 1414 237 348 0 0 chrX 108761290 108761359 -57888937 - ID SINE ID -155 69 1 4 1414 335 336 48 0 chrX 108761496 108761621 -57888675 - L1MDb LINE L1 -5434 975 845 4 1414 414 0 0 0 chrX 108762438 108762484 -57887812 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1414 316 298 140 14 chrX 108762573 108762716 -57887580 - L1MDb LINE L1 -6241 168 8 4 1414 3802 57 52 8 chrX 108763690 108764190 -57886106 + L1Md_F2 LINE L1 6049 6570 -12 4 1414 1820 60 0 8 chrX 108764203 108764486 -57885810 + L1Md_F2 LINE L1 6327 6582 0 4 1414 26 0 0 0 chrX 108764553 108764579 -57885717 + AT_rich Low_complexity Low_complexity 1 26 0 4 1414 617 287 116 38 chrX 108765781 108766074 -57884222 + MARNA DNA Mariner 22 337 -249 4 1414 212 329 117 82 chrX 108766273 108766640 -57883656 - L2c LINE L2 -47 3340 2961 4 1414 1522 237 38 58 chrX 108767346 108767745 -57882551 + MTD LTR MaLR 1 391 -28 4 1414 4813 230 35 61 chrX 108767743 108769019 -57881277 + MTD-int LTR MaLR 16 1258 0 4 1414 1090 217 10 0 chrX 108769022 108769225 -57881071 + MTD LTR MaLR 8 212 -209 4 1414 1165 194 75 20 chrX 108769227 108769479 -57880817 + MTD LTR MaLR 154 419 0 4 1414 417 102 36 18 chrX 108770014 108770124 -57880172 + (TA)n Simple_repeat Simple_repeat 1 112 0 4 1414 25 0 0 0 chrX 108770543 108770568 -57879728 + AT_rich Low_complexity Low_complexity 1 25 0 4 1414 299 276 131 19 chrX 108771461 108771568 -57878728 + B1F SINE Alu 31 149 0 4 1414 428 233 0 32 chrX 108771958 108772051 -57878245 - B1_Mur1 SINE Alu 0 149 60 4 1414 919 80 88 0 chrX 108772369 108772506 -57877790 + B2_Mm2 SINE B2 1 149 -46 4 1414 543 16 0 0 chrX 108772525 108772589 -57877707 + (TC)n Simple_repeat Simple_repeat 2 65 0 4 1414 641 244 147 62 chrX 108774697 108774955 -57875341 - Lx8 LINE L1 -576 6897 6618 4 1414 282 342 0 43 chrX 108775009 108775125 -57875171 + Lx8 LINE L1 7156 7266 -207 4 1414 236 262 45 15 chrX 108775125 108775191 -57875105 + RMER15 LTR ERVL 403 470 -105 4 1414 200 367 110 48 chrX 108776532 108776678 -57873618 - MIRc SINE MIR -105 163 9 4 1414 207 250 12 23 chrX 108777114 108777200 -57873096 + (TATAA)n Simple_repeat Simple_repeat 5 89 0 4 1414 182 196 77 19 chrX 108777750 108777802 -57872494 + L3 LINE CR1 4120 4174 -315 4 1414 1284 88 22 0 chrX 108777813 108777994 -57872302 + B2_Mm2 SINE B2 3 187 -8 4 1414 3638 48 11 0 chrX 108778423 108778882 -57871414 - L1Md_F3 LINE L1 -3 6581 6118 4 1414 2950 42 0 0 chrX 108778882 108779236 -57871060 + L1_Mm LINE L1 5487 5840 -43 4 1414 1058 97 77 18 chrX 108779237 108779405 -57870891 - B2_Mm2 SINE B2 -17 178 1 4 1414 822 78 117 0 chrX 108780230 108780358 -57869938 + B2_Mm2 SINE B2 2 144 -51 4 1414 416 79 0 0 chrX 108780390 108780453 -57869843 + B2_Mm1a SINE B2 127 189 -4 4 1414 1123 82 0 0 chrX 108780459 108780606 -57869690 + B1_Mm SINE Alu 1 147 0 4 1414 567 310 82 0 chrX 108781136 108781294 -57869002 - ID_B1 SINE B4 -52 172 2 5 1414 504 266 7 28 chrX 108781734 108781877 -57868419 - ID_B1 SINE B4 -6 218 79 5 1414 1018 228 107 3 chrX 108781900 108782200 -57868096 + Lx9 LINE L1 7295 7625 -19 5 1414 277 321 9 0 chrX 108782499 108782611 -57867685 - PB1D9 SINE Alu -7 113 1 5 1414 238 224 44 15 chrX 108783162 108783230 -57867066 - L1MB7 LINE L1 -66 6118 6049 5 1414 21 36 0 0 chrX 108783815 108783843 -57866453 + AT_rich Low_complexity Low_complexity 1 28 0 5 1414 27 0 0 0 chrX 108783973 108784000 -57866296 + AT_rich Low_complexity Low_complexity 1 27 0 5 1414 248 243 135 10 chrX 108785628 108785732 -57864564 - PB1D10 SINE Alu 0 117 1 5 1414 235 243 54 72 chrX 108787442 108787553 -57862743 + MIRc SINE MIR 64 172 -96 5 1414 726 320 117 33 chrX 108788210 108788724 -57861572 - L1ME1 LINE L1 -16 6336 5780 5 1414 346 181 0 31 chrX 108789117 108789214 -57861082 + Lx7 LINE L1 7603 7696 0 5 176 346 330 148 37 chrX 108789428 108789892 -57860404 - L1ME1 LINE L1 -1459 4860 4347 5 1415 983 304 78 116 chrX 108789906 108790548 -57859748 - L1MD LINE L1 -1945 4201 3539 5 1415 311 276 26 0 chrX 108790548 108790624 -57859672 + RSINE1 SINE B4 3 80 -85 5 1415 983 304 78 116 chrX 108790624 108790655 -57859641 - L1MD LINE L1 -1945 3538 3505 5 1415 513 32 0 0 chrX 108790655 108790718 -57859578 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 1415 983 304 78 116 chrX 108790718 108792049 -57858247 - L1MD LINE L1 -2642 3504 2201 5 1415 186 43 0 0 chrX 108792077 108792100 -57858196 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 5 1415 584 167 78 16 chrX 108792100 108792228 -57858068 - B1_Mur4 SINE Alu -12 138 3 5 1415 241 359 9 86 chrX 108792427 108792463 -57857833 - ID_B1 SINE B4 -31 193 163 5 1415 6841 21 0 0 chrX 108792463 108793255 -57857041 + L1Md_A LINE L1 5791 6582 0 5 1415 241 359 9 86 chrX 108793255 108793334 -57856962 - ID_B1 SINE B4 -62 162 87 5 1415 242 324 96 31 chrX 108793534 108794012 -57856284 - L1ME1 LINE L1 -3271 3048 2540 5 1415 1005 107 0 0 chrX 108794047 108794187 -57856109 - B1_Mus1 SINE Alu -8 140 1 5 1415 390 289 108 76 chrX 108794296 108794900 -57855396 - L1ME1 LINE L1 -4033 2367 1745 5 1415 290 226 0 31 chrX 108794982 108795046 -57855250 - ID_B1 SINE B4 0 224 163 5 1415 498 119 0 0 chrX 108795137 108795221 -57855075 + (TC)n Simple_repeat Simple_repeat 1 84 0 5 1415 318 344 80 0 chrX 108795263 108795388 -57854908 - RSINE1 SINE B4 -30 135 1 5 1415 443 302 132 5 chrX 108795397 108795587 -57854709 - ID_B1 SINE B4 -6 218 5 5 1415 231 347 19 26 chrX 108795977 108796131 -57854165 - L1ME1 LINE L1 -5543 857 705 5 1415 487 325 32 0 chrX 108796319 108796442 -57853854 - ID_B1 SINE B4 -13 211 85 5 1415 1860 31 13 0 chrX 108796449 108796677 -57853619 - L1Md_F3 LINE L1 0 6584 6354 5 1415 504 349 43 43 chrX 108796735 108797172 -57853124 - L1ME1 LINE L1 -5925 475 39 5 1415 518 297 25 0 chrX 108797424 108797542 -57852754 - B1_Mus2 SINE Alu -19 128 8 5 1415 621 243 0 22 chrX 108798386 108798525 -57851771 - B1F SINE Alu -13 136 1 5 1415 659 12 0 0 chrX 108799197 108799280 -57851016 - L1Md_T LINE L1 -1 6581 6499 5 1415 2492 234 50 25 chrX 108799579 108800293 -57850003 + L1MA8 LINE L1 5514 6245 -46 5 1415 299 371 0 20 chrX 108800303 108800402 -57849894 + PB1D10 SINE Alu 15 111 -6 5 1415 24 32 0 0 chrX 108800414 108800445 -57849851 + AT_rich Low_complexity Low_complexity 1 31 0 5 1415 600 294 11 66 chrX 108800613 108800795 -57849501 - ID_B1 SINE B4 -51 173 2 5 1415 3822 41 13 6 chrX 108800834 108801306 -57848990 + MT2C_Mm LTR ERVL 1 475 0 5 1415 1515 37 0 11 chrX 108801307 108801497 -57848799 + MTB LTR MaLR 213 400 0 5 1415 1082 76 7 0 chrX 108801861 108802006 -57848290 + B1_Mm SINE Alu 2 147 0 5 1415 597 110 0 0 chrX 108802398 108802489 -57847807 + (TG)n Simple_repeat Simple_repeat 2 92 0 5 1415 404 305 48 0 chrX 108802497 108802602 -57847694 - PB1D10 SINE Alu -7 110 1 5 1415 28 48 0 0 chrX 108803009 108803051 -57847245 + AT_rich Low_complexity Low_complexity 1 42 0 5 1415 277 328 41 70 chrX 108803072 108803198 -57847098 - MLT1B LTR MaLR -6 461 277 5 1415 617 317 94 76 chrX 108803200 108803595 -57846701 + MLT1D LTR MaLR 34 451 -54 5 1415 256 365 46 9 chrX 108803597 108803705 -57846591 - PB1D10 SINE Alu 0 117 6 5 1415 231 267 0 16 chrX 108803705 108803766 -57846530 + MLT1D LTR MaLR 560 619 -8 5 1415 3053 47 21 0 chrX 108804013 108804396 -57845900 + L1Md_F3 LINE L1 6181 6571 -13 5 1415 404 265 44 25 chrX 108804542 108804701 -57845595 - MER5A1 DNA MER1_type -4 162 1 5 1415 230 219 0 0 chrX 108805529 108805570 -57844726 + MIRc SINE MIR 62 102 -166 5 1415 369 0 0 0 chrX 108806042 108806083 -57844213 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1415 266 306 16 0 chrX 108806094 108806156 -57844140 - BC1_Mm scRNA scRNA -81 71 9 5 1415 533 169 25 17 chrX 108806209 108806329 -57843967 - Lx9 LINE L1 -7 7637 7517 5 1415 26 30 0 0 chrX 108806563 108806596 -57843700 + AT_rich Low_complexity Low_complexity 1 33 0 5 1415 399 306 71 50 chrX 108806636 108806777 -57843519 - B3 SINE B2 0 216 73 5 1415 528 26 39 0 chrX 108806923 108807001 -57843295 + (CA)n Simple_repeat Simple_repeat 1 81 0 5 1415 315 304 58 81 chrX 108807085 108807257 -57843039 + MIRb SINE MIR 42 209 -59 5 1415 295 298 53 0 chrX 108807303 108807397 -57842899 + MIR3 SINE MIR 96 194 -14 5 1415 324 0 0 0 chrX 108807486 108807522 -57842774 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 5 1415 1195 35 0 0 chrX 108807524 108807665 -57842631 - B1_Mm SINE Alu -6 141 1 5 1415 22 0 0 0 chrX 108807928 108807950 -57842346 + AT_rich Low_complexity Low_complexity 1 22 0 5 1415 207 167 0 0 chrX 108808153 108808195 -57842101 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 1415 324 0 0 0 chrX 108808565 108808601 -57841695 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1415 234 0 0 0 chrX 108808778 108808804 -57841492 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 1415 396 138 0 0 chrX 108811610 108811675 -57838621 + (TA)n Simple_repeat Simple_repeat 1 65 0 5 1415 671 200 65 29 chrX 108812017 108812156 -57838140 + B3 SINE B2 73 216 0 5 1415 233 325 12 12 chrX 108812246 108812327 -57837969 - ID2 SINE ID -1 82 2 5 1415 330 274 93 19 chrX 108812327 108812431 -57837865 - PB1D10 SINE Alu -8 112 1 5 1415 24 0 0 0 chrX 108813383 108813407 -57836889 + AT_rich Low_complexity Low_complexity 1 24 0 5 1415 2131 281 75 24 chrX 108813805 108813982 -57836314 + L1_Mur3 LINE L1 4852 5044 -836 5 1415 675 75 0 0 chrX 108813982 108814076 -57836220 + (TAGA)n Simple_repeat Simple_repeat 1 94 0 5 1415 2131 281 75 24 chrX 108814076 108814819 -57835477 + L1_Mur3 LINE L1 5045 5819 -61 5 1415 22 35 0 0 chrX 108814841 108814870 -57835426 + AT_rich Low_complexity Low_complexity 1 29 0 5 1415 366 23 0 0 chrX 108815044 108815087 -57835209 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 5 1415 225 303 130 78 chrX 108815586 108815740 -57834556 + MER63B DNA AcHobo 274 435 -1 5 1415 3540 80 22 6 chrX 108816085 108816576 -57833720 + L1Md_F2 LINE L1 6072 6570 -12 5 1415 207 0 0 0 chrX 108816739 108816762 -57833534 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 1415 25 0 0 0 chrX 108817621 108817646 -57832650 + AT_rich Low_complexity Low_complexity 1 25 0 5 1415 203 175 0 0 chrX 108817708 108817748 -57832548 + T-rich Low_complexity Low_complexity 1 40 0 5 1415 2271 52 14 0 chrX 108817751 108818040 -57832256 - L1_Mus1 LINE L1 0 6567 6275 5 1415 334 319 101 6 chrX 108818878 108819036 -57831260 + L2a LINE L2 3152 3324 -102 5 1415 1919 227 24 20 chrX 108819043 108819452 -57830844 - MTD LTR MaLR -8 411 1 5 1415 275 322 0 91 chrX 108819460 108819559 -57830737 + L2b LINE L2 3286 3375 0 5 1415 955 325 98 6 chrX 108819799 108820127 -57830169 + MTE2b LTR MaLR 2 359 -20 5 1415 342 264 28 0 chrX 108820243 108820315 -57829981 - RMER30 DNA MER1_type -3 199 126 5 1415 306 0 0 0 chrX 108820317 108820351 -57829945 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 5 1415 818 45 3 0 chrX 108820351 108820480 -57829816 - B1_Mus2 SINE Alu -3 146 16 5 1415 2313 83 9 58 chrX 108822780 108823124 -57827172 + ORR1A2 LTR MaLR 1 327 0 5 1415 9522 138 107 13 chrX 108823124 108824915 -57825381 + ORR1A2-int LTR MaLR 1 1958 -5 5 1415 2415 73 6 0 chrX 108824920 108825237 -57825059 + ORR1A2 LTR MaLR 1 319 -8 5 1415 334 305 68 34 chrX 108825593 108825739 -57824557 + L1MEe LINE L1 1465 1615 -4551 5 1415 352 340 33 39 chrX 108825808 108825961 -57824335 + RSINE1 SINE B4 8 159 -6 5 1415 6342 37 0 0 chrX 108826157 108826916 -57823380 - L1Md_F2 LINE L1 0 6582 5824 5 1415 21 0 0 0 chrX 108827039 108827060 -57823236 + AT_rich Low_complexity Low_complexity 1 21 0 5 1415 267 316 113 64 chrX 108827188 108827775 -57822521 + L1MEe LINE L1 3356 3978 -2168 5 1415 403 316 6 31 chrX 108827775 108827938 -57822358 - RSINE1 SINE B4 -4 161 3 5 1415 267 316 113 64 chrX 108827938 108828225 -57822071 + L1MEe LINE L1 3979 4273 -1873 5 1415 902 335 11 11 chrX 108828702 108828980 -57821316 + B4A SINE B4 1 278 -14 5 1415 1166 296 42 50 chrX 108829019 108829400 -57820896 + MTE2a LTR MaLR 1 378 -1 5 1415 252 335 47 7 chrX 108829486 108829636 -57820660 + L1MEe LINE L1 4547 4702 -1444 5 1415 305 294 41 32 chrX 108830009 108830132 -57820164 + L1M4 LINE L1 2955 3078 -3065 5 1415 292 244 121 21 chrX 108830407 108830645 -57819651 + L1M4 LINE L1 3250 3502 -2644 5 1415 644 321 24 24 chrX 108830650 108830819 -57819477 + B3A SINE B2 1 169 -29 5 1415 191 36 36 0 chrX 108830846 108830874 -57819422 + (GA)n Simple_repeat Simple_repeat 2 30 0 5 1415 281 296 63 27 chrX 108830890 108831001 -57819295 + L1M4 LINE L1 3489 3603 -2543 5 1415 2450 30 0 3 chrX 108831063 108831361 -57818935 + L1Md_F2 LINE L1 6275 6571 -11 5 1415 40723 10 0 6 chrX 108831921 108838123 -57812173 - L1Md_A LINE L1 -1 6581 422 5 1415 483 309 123 56 chrX 108838257 108838751 -57811545 - MT2A LTR ERVL 0 562 5 5 1415 544 319 78 34 chrX 108838764 108839176 -57811120 + L1M4 LINE L1 3790 4219 -1927 5 1415 1853 240 20 78 chrX 108839200 108839748 -57810548 - RMER19C LTR ERVK 0 611 96 5 1415 253 219 0 59 chrX 108839817 108839885 -57810411 - MTB_Mm LTR MaLR -53 354 291 5 1415 857 299 18 56 chrX 108839967 108840441 -57809855 - L1_Mur3 LINE L1 -1099 5047 4551 5 1415 2311 261 112 24 chrX 108840443 108841149 -57809147 + Lx8 LINE L1 6357 7124 -349 5 1415 863 254 9 69 chrX 108841149 108841365 -57808931 - ORR1D1-int LTR MaLR -1166 204 2 5 1415 1283 258 35 19 chrX 108841366 108841734 -57808562 - ORR1D1 LTR MaLR 0 374 1 5 1415 270 284 117 44 chrX 108842149 108842355 -57807941 - L1M5 LINE L1 -489 5635 5415 5 1415 3312 208 90 19 chrX 108842563 108843341 -57806955 + Lx5 LINE L1 5590 6422 -628 6 1415 6397 118 12 39 chrX 108843345 108844518 -57805778 + L1_Mus4 LINE L1 4795 5919 -719 6 1415 2857 85 10 2 chrX 108844518 108844921 -57805375 + L1_Mus4 LINE L1 6229 6634 -2 6 1415 1777 271 15 58 chrX 108844947 108845224 -57805072 + Lx5 LINE L1 6457 6886 -810 6 1415 486 0 0 0 chrX 108845224 108845278 -57805018 + (TC)n Simple_repeat Simple_repeat 2 55 0 6 1415 1777 281 26 103 chrX 108845278 108845318 -57804978 + Lx5 LINE L1 6727 6747 -303 6 1415 207 0 0 0 chrX 108845318 108845341 -57804955 + (TA)n Simple_repeat Simple_repeat 1 23 0 6 1415 1777 281 26 103 chrX 108845341 108845488 -57804808 + Lx5 LINE L1 6748 6859 -191 6 1415 5345 112 55 7 chrX 108845488 108846343 -57803953 - Lx3C LINE L1 -2 6974 6079 6 1415 1777 281 26 103 chrX 108846343 108846515 -57803781 + Lx5 LINE L1 6860 7030 -20 6 1415 21 0 0 0 chrX 108846659 108846680 -57803616 + AT_rich Low_complexity Low_complexity 1 21 0 6 1415 777 263 66 0 chrX 108847831 108848029 -57802267 + B3 SINE B2 1 211 -5 6 1415 362 259 34 59 chrX 108848058 108848177 -57802119 + RSINE1 SINE B4 14 129 -36 6 1415 1856 27 0 4 chrX 108849443 108849668 -57800628 + L1Md_A LINE L1 6358 6581 -1 6 1415 253 301 0 0 chrX 108850471 108850544 -57799752 + ID4_ SINE ID 2 74 -9 6 1415 305 312 116 55 chrX 108851060 108851254 -57799042 + L2c LINE L2 3160 3384 -3 6 1415 363 358 16 16 chrX 108851663 108851788 -57798508 - MIRb SINE MIR -111 157 33 6 1415 354 250 43 155 chrX 108851964 108852125 -57798171 + B1_Mur1 SINE Alu 1 143 -6 6 1415 487 215 140 5 chrX 108852360 108852491 -57797805 - B3 SINE B2 0 216 70 6 1415 6074 151 28 35 chrX 108852716 108853156 -57797140 - RLTR25A LTR ERVK 0 1103 677 6 1415 2773 98 28 7 chrX 108853156 108853578 -57796718 - Lx3A LINE L1 -6 6975 6545 6 1415 6074 151 28 35 chrX 108853578 108853744 -57796552 - RLTR25A LTR ERVK -427 676 506 6 1415 186 43 0 0 chrX 108853744 108853767 -57796529 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 1415 6074 151 28 35 chrX 108853767 108854270 -57796026 - RLTR25A LTR ERVK -598 505 2 6 1415 468 319 15 0 chrX 108854822 108854957 -57795339 + B1F SINE Alu 4 140 -9 6 1415 4635 60 0 3 chrX 108855185 108855772 -57794524 - L1Md_F2 LINE L1 -8 6574 5990 6 1415 2123 172 167 30 chrX 108859362 108859900 -57790396 - RMER6C LTR ERVK -78 612 1 6 1415 25 0 0 0 chrX 108859919 108859944 -57790352 + AT_rich Low_complexity Low_complexity 1 25 0 6 1415 5098 63 12 1 chrX 108860048 108860717 -57789579 - L1_Mus2 LINE L1 0 6566 5891 6 1415 567 170 47 9 chrX 108860720 108860827 -57789469 + MTC LTR MaLR 10 120 -301 6 1415 3146 41 28 3 chrX 108860910 108861302 -57788994 - L1Md_F3 LINE L1 -15 6569 6168 6 1415 1699 184 46 13 chrX 108861302 108861604 -57788692 + MTC LTR MaLR 110 421 0 6 1415 613 281 62 22 chrX 108862178 108862404 -57787892 - L2 LINE L2 -920 2499 2265 6 1415 25 0 0 0 chrX 108863566 108863591 -57786705 + AT_rich Low_complexity Low_complexity 1 25 0 6 1415 351 307 89 9 chrX 108864221 108864435 -57785861 + L1MB1 LINE L1 5912 6142 -26 6 1415 285 29 0 0 chrX 108864742 108864776 -57785520 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1415 22 56 0 0 chrX 108865032 108865068 -57785228 + AT_rich Low_complexity Low_complexity 1 36 0 6 1415 282 246 50 0 chrX 108865230 108865329 -57784967 - L1MA4 LINE L1 -412 5888 5749 6 1415 351 0 0 0 chrX 108865677 108865716 -57784580 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 6 1415 1147 101 0 0 chrX 108865717 108865875 -57784421 - B2_Mm2 SINE B2 -37 158 1 6 1415 3468 100 12 187 chrX 108865950 108866678 -57783618 + MT2B LTR ERVL 1 601 0 6 1415 258 312 12 0 chrX 108867612 108867692 -57782604 + GA-rich Low_complexity Low_complexity 5 85 0 6 1415 211 345 162 0 chrX 108868054 108868196 -57782100 - MIRc SINE MIR -47 221 57 6 1415 243 267 0 91 chrX 108869367 108869433 -57780863 + RSINE1 SINE B4 70 129 -36 6 1415 396 0 0 0 chrX 108869451 108869495 -57780801 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1415 250 211 190 63 chrX 108869546 108869688 -57780608 - Lx8 LINE L1 -30 7443 7284 6 1415 416 200 0 10 chrX 108869710 108869811 -57780485 + (TA)n Simple_repeat Simple_repeat 2 101 0 6 1415 477 138 25 0 chrX 108869971 108870051 -57780245 + Lx3C LINE L1 6567 6648 -328 6 1415 3968 129 34 25 chrX 108870048 108870730 -57779566 - L1_Mur2 LINE L1 -1222 4655 3968 6 1415 605 134 10 0 chrX 108870729 108870826 -57779470 + L1_Mur2 LINE L1 5033 5130 -747 6 1415 685 187 89 1 chrX 108870822 108870990 -57779306 + Lx3C LINE L1 6809 6974 -2 6 1415 26 64 0 0 chrX 108871095 108871142 -57779154 + AT_rich Low_complexity Low_complexity 1 47 0 6 1415 290 216 58 75 chrX 108871152 108871272 -57779024 - L1MB3 LINE L1 -17 6166 6049 6 1415 2082 144 108 5 chrX 108871265 108871635 -57778661 - RMER1A Other Other -1 1029 622 6 1415 7154 79 35 27 chrX 108871672 108872273 -57778023 - L1_Mus3 LINE L1 -5 6633 6015 6 1415 1245 34 0 0 chrX 108872273 108872420 -57777876 - B1_Mus2 SINE Alu 0 147 1 6 1415 7154 79 35 27 chrX 108872420 108872854 -57777442 - L1_Mus3 LINE L1 -624 6014 5590 6 1415 438 191 83 0 chrX 108872845 108872929 -57777367 - RMER1A Other Other -617 413 323 6 1415 1484 117 4 40 chrX 108873044 108873293 -57777003 - Lx3C LINE L1 -2 6974 6735 6 1415 646 283 60 41 chrX 108873418 108873687 -57776609 + L1MB3 LINE L1 5749 6022 -161 6 1415 968 62 46 0 chrX 108873708 108873838 -57776458 + B1_Mus1 SINE Alu 1 136 -12 6 1415 459 0 0 0 chrX 108873839 108873890 -57776406 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 1415 774 171 0 76 chrX 108874033 108874191 -57776105 + RMER6C LTR ERVK 1 146 -544 6 1415 292 333 0 38 chrX 108874219 108874325 -57775971 - B2_Mm2 SINE B2 -93 102 1 6 1415 388 304 63 23 chrX 108874326 108874501 -57775795 - L1M3 LINE L1 -516 5667 5486 6 1415 28 0 0 0 chrX 108874501 108874529 -57775767 + AT_rich Low_complexity Low_complexity 1 28 0 6 1415 4704 74 0 2 chrX 108874698 108875317 -57774979 - L1_Mm LINE L1 -290 5593 4976 6 1415 234 91 0 0 chrX 108875740 108875773 -57774523 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 6 1415 21 36 0 0 chrX 108875925 108875953 -57774343 + AT_rich Low_complexity Low_complexity 1 28 0 6 1415 11132 156 35 30 chrX 108876433 108876488 -57773808 + Lx6 LINE L1 3705 3753 -2127 6 1415 2993 74 18 0 chrX 108876488 108876881 -57773415 - MTB LTR MaLR 0 400 1 6 1415 11132 156 35 30 chrX 108876881 108877818 -57772478 + Lx6 LINE L1 3754 4655 -1225 6 1415 1101 118 0 0 chrX 108877827 108877996 -57772300 + (TTTC)n Simple_repeat Simple_repeat 2 170 0 6 1415 6460 103 13 6 chrX 108877996 108878953 -57771343 - Lx3A LINE L1 -13 6968 6002 6 1415 11132 180 39 44 chrX 108878953 108880645 -57769651 + Lx6 LINE L1 4656 6400 -1060 6 1415 1148 81 0 0 chrX 108880645 108880793 -57769503 - B1_Mus1 SINE Alu 0 148 1 6 1415 5984 235 47 76 chrX 108880793 108881698 -57768598 + Lx6 LINE L1 6401 7248 -212 6 1415 458 33 17 0 chrX 108881700 108881760 -57768536 + (TTATA)n Simple_repeat Simple_repeat 2 62 0 6 1415 384 160 210 0 chrX 108881896 108882015 -57768281 + BC1_Mm scRNA scRNA 1 144 -8 6 1415 21 0 0 0 chrX 108882241 108882262 -57768034 + AT_rich Low_complexity Low_complexity 1 21 0 6 1415 299 253 20 137 chrX 108883532 108883729 -57766567 + L1MA4 LINE L1 5744 5917 -383 6 1415 239 188 0 20 chrX 108883773 108883816 -57766480 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 6 1415 387 0 0 0 chrX 108883816 108883859 -57766437 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1415 25 51 0 0 chrX 108884010 108884049 -57766247 + AT_rich Low_complexity Low_complexity 1 39 0 6 1415 198 282 107 64 chrX 108884189 108884329 -57765967 - MIRc SINE MIR -51 217 72 6 1415 3088 67 0 59 chrX 108884773 108885215 -57765081 + L1_Mus2 LINE L1 6151 6566 0 6 1415 550 277 60 48 chrX 108885545 108885712 -57764584 - B3A SINE B2 0 198 30 6 1415 215 386 33 50 chrX 108886246 108886296 -57764000 - ID_B1 SINE B4 -26 198 149 6 1415 604 58 97 0 chrX 108886296 108886399 -57763897 + L1Md_F3 LINE L1 6469 6581 -3 6 1415 219 383 0 0 chrX 108886407 108886467 -57763829 - B1F1 SINE Alu -89 60 1 6 1415 1925 157 105 13 chrX 108886587 108887032 -57763264 + RMER1B Other Other 576 1061 -5 6 1415 1587 133 14 28 chrX 108887404 108887690 -57762606 - Lx2 LINE L1 0 6997 6716 6 1415 333 47 0 0 chrX 108887690 108887733 -57762563 + Lx2B LINE L1 6594 6636 -364 6 1415 421 229 191 20 chrX 108888804 108888951 -57761345 - Lx6 LINE L1 -11 7449 7278 6 1415 9130 158 46 26 chrX 108889039 108891622 -57758674 - RMER16-int LTR ERVK -1230 4176 1653 6 1415 243 0 0 0 chrX 108891622 108891649 -57758647 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1415 8819 181 67 82 chrX 108891649 108893033 -57757263 - RMER16-int LTR ERVK -3774 3470 2083 6 1415 28 29 0 0 chrX 108893049 108893084 -57757212 + AT_rich Low_complexity Low_complexity 1 35 0 6 1415 371 285 56 53 chrX 108893084 108893403 -57756893 - ETnERV-int LTR ERVK -2991 323 4 6 1415 1619 121 259 18 chrX 108893409 108893745 -57756551 - RLTR9D LTR ERVK -3 417 1 6 1415 562 226 0 9 chrX 108893747 108893863 -57756433 - Lx6 LINE L1 -340 7120 7006 6 1415 5154 177 17 74 chrX 108893863 108894113 -57756183 - L1_Mur3 LINE L1 -2329 3551 3308 6 1415 339 80 0 0 chrX 108894113 108894163 -57756133 + B1_Mur4 SINE Alu 101 150 0 6 1415 5154 177 17 74 chrX 108894163 108895213 -57755083 - L1_Mur3 LINE L1 -2329 3307 2279 6 1415 36376 47 0 3 chrX 108895241 108902048 -57748248 - L1Md_T LINE L1 0 6585 1 6 1415 1364 198 45 32 chrX 108902055 108902509 -57747787 - L1_Mur3 LINE L1 -2650 1265 859 6 1415 522 0 0 0 chrX 108902692 108902750 -57747546 + (GA)n Simple_repeat Simple_repeat 2 59 0 6 1415 449 161 11 0 chrX 108902750 108902837 -57747459 + GA-rich Low_complexity Low_complexity 2 89 0 6 1415 293 290 116 30 chrX 108905832 108906273 -57744023 - L1ME4a LINE L1 -3 6121 5643 6 1415 12087 56 2 0 chrX 108907280 108909584 -57740712 - L1Md_F2 LINE L1 0 6582 4274 6 1415 32828 75 14 2 chrX 108909583 108915968 -57734328 - L1Md_F2 LINE L1 -12 6570 104 6 1415 712 81 0 75 chrX 108916016 108916150 -57734146 - Lx3_Mus LINE L1 -799 6210 6087 6 1415 5486 76 10 23 chrX 108916155 108916926 -57733370 + Lx3_Mus LINE L1 6241 7001 -8 6 1415 701 309 46 42 chrX 108917268 108918758 -57731538 - L1M2 LINE L1 -3197 3648 2159 6 1415 1040 161 127 48 chrX 108919522 108919751 -57730545 - MTC LTR MaLR 0 421 175 6 1415 797 265 67 69 chrX 108920122 108920540 -57729756 + L1M2 LINE L1 4609 5025 -1118 6 1415 622 169 228 90 chrX 108920542 108920731 -57729565 + B3 SINE B2 1 215 -1 6 1416 403 249 140 37 chrX 108920929 108921250 -57729046 + L1M2 LINE L1 5254 5607 -693 6 1416 220 182 55 55 chrX 108921255 108921383 -57728913 + (TA)n Simple_repeat Simple_repeat 1 128 0 6 1416 318 129 0 0 chrX 108921426 108921488 -57728808 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 6 1416 1141 55 7 7 chrX 108921559 108921705 -57728591 - B1_Mus2 SINE Alu 0 147 2 6 1416 283 272 85 31 chrX 108921840 108921969 -57728327 + L1M2 LINE L1 5610 5745 -555 6 1416 33288 67 15 2 chrX 108922066 108927390 -57722906 + L1Md_F2 LINE L1 413 5763 -120 7 1416 3843 54 0 8 chrX 108927487 108927975 -57722321 + L1Md_F2 LINE L1 6096 6579 -3 7 1416 967 239 130 35 chrX 108927979 108928317 -57721979 - ORR1D1 LTR MaLR -4 370 1 7 1416 307 252 117 0 chrX 108928318 108928429 -57721867 + L1MA4 LINE L1 5777 5900 -400 7 1416 212 370 111 0 chrX 108928604 108928712 -57721584 + PB1D7 SINE Alu 1 120 0 7 1416 512 330 92 45 chrX 108928774 108928916 -57721380 - MLT1A LTR MaLR -25 349 206 7 1416 3523 20 2 0 chrX 108928916 108929311 -57720985 - MTA_Mm LTR MaLR 0 396 1 7 1416 512 330 92 45 chrX 108929311 108929482 -57720814 - MLT1A LTR MaLR -169 205 21 7 1416 22 35 0 0 chrX 108929832 108929861 -57720435 + AT_rich Low_complexity Low_complexity 1 29 0 7 1416 431 258 46 0 chrX 108930045 108930196 -57720100 + L1MC3 LINE L1 7473 7630 -155 7 1416 34801 64 3 1 chrX 108930557 108936607 -57713689 - L1Md_F3 LINE L1 -1 6583 567 7 1416 2532 137 110 16 chrX 108936957 108937410 -57712886 + RLTR44C LTR ERVK 1 496 -6 7 1416 1358 149 0 8 chrX 108937420 108937663 -57712633 + RLTR44-int LTR ERVK 14 254 -2558 7 1416 679 114 17 17 chrX 108937719 108937835 -57712461 + RLTR44-int LTR ERVK 816 931 -1881 7 1416 2273 152 21 47 chrX 108937843 108938150 -57712146 + RLTR44-int LTR ERVK 795 1027 -1785 7 1416 3428 64 0 2 chrX 108938150 108938586 -57711710 + L1Md_F3 LINE L1 6149 6583 -1 7 1416 2273 159 28 75 chrX 108938586 108938900 -57711396 + RLTR44-int LTR ERVK 1028 1332 -1480 7 1416 401 271 33 50 chrX 108938968 108939250 -57711046 + IAPEy-int LTR ERVK 3684 3817 -3696 7 1416 4607 44 0 0 chrX 108939258 108939827 -57710469 + RLTR44-int LTR ERVK 2244 2812 0 7 1416 2700 94 117 5 chrX 108939827 108940256 -57710040 + RLTR44C LTR ERVK 1 477 -25 7 1416 7209 64 14 0 chrX 108940536 108942157 -57708139 - L1Md_F2 LINE L1 -12 6570 4928 7 1416 6499 89 20 1 chrX 108942415 108943373 -57706923 - L1_Mus3 LINE L1 -2 6636 5677 7 1416 222 390 32 0 chrX 108943376 108943499 -57706797 - L3 LINE CR1 -98 4391 4265 7 1416 2871 53 40 0 chrX 108943544 108943876 -57706420 + L1_Mus1 LINE L1 6176 6514 -53 7 1416 270 0 0 0 chrX 108943876 108943906 -57706390 + (TA)n Simple_repeat Simple_repeat 2 31 0 7 1416 2847 53 40 0 chrX 108943906 108943949 -57706347 + L1_Mus1 LINE L1 6515 6564 -3 7 1416 1208 124 10 0 chrX 108943997 108944190 -57706106 - Lx2 LINE L1 -655 6342 6148 7 1416 752 163 50 14 chrX 108945538 108945700 -57704596 - B2_Mm2 SINE B2 -27 166 2 7 1416 204 83 20 40 chrX 108945769 108945819 -57704477 + (CAAA)n Simple_repeat Simple_repeat 4 52 0 7 1416 492 272 60 11 chrX 108945832 108946014 -57704282 - Lx7 LINE L1 -387 7309 7119 7 1416 30 0 0 0 chrX 108946071 108946101 -57704195 + AT_rich Low_complexity Low_complexity 1 30 0 7 1416 285 247 12 38 chrX 108946287 108946367 -57703929 - L1M6 LINE L1 -4809 1687 1610 7 1416 308 73 36 0 chrX 108946475 108946530 -57703766 + (TTTTTG)n Simple_repeat Simple_repeat 2 58 0 7 1416 1508 179 42 64 chrX 108946835 108947242 -57703054 + RMER10B LTR ERVL 1 398 0 7 1416 297 0 0 0 chrX 108947336 108947369 -57702927 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 7 1416 6624 109 40 11 chrX 108947370 108948418 -57701878 - Lx3_Mus LINE L1 -18 6991 5914 7 1416 7969 97 19 8 chrX 108948419 108949633 -57700663 - L1_Mur1 LINE L1 -755 5131 3905 7 1416 354 295 68 54 chrX 108949633 108949780 -57700516 - B1F SINE Alu 0 149 1 7 1416 294 123 0 0 chrX 108949852 108949909 -57700387 + (T)n Simple_repeat Simple_repeat 1 57 0 7 1416 507 33 0 0 chrX 108949990 108950051 -57700245 + (TTTC)n Simple_repeat Simple_repeat 3 63 0 7 1416 346 291 9 3 chrX 108950096 108950191 -57700105 - PB1D10 SINE Alu -21 99 1 7 1416 33 0 0 0 chrX 108950604 108950637 -57699659 + AT_rich Low_complexity Low_complexity 1 33 0 7 1416 2778 62 3 8 chrX 108950982 108951356 -57698940 + L1Md_F2 LINE L1 6211 6582 0 7 1416 236 227 15 15 chrX 108951452 108951519 -57698777 + (TATATG)n Simple_repeat Simple_repeat 4 70 0 7 1416 271 338 0 0 chrX 108952242 108952316 -57697980 + ID4 SINE ID 1 74 -9 7 1416 420 348 29 58 chrX 108952432 108952606 -57697690 - B3A SINE B2 -16 182 14 7 1416 467 261 100 14 chrX 108952636 108952776 -57697520 - Lx8 LINE L1 -286 7187 7036 7 1416 457 303 33 33 chrX 108952782 108952932 -57697364 + Lx8 LINE L1 7181 7330 -143 7 1416 6155 80 38 1 chrX 108952940 108953838 -57696458 - MusHAL1 LINE L1 -366 2346 1416 7 1416 7190 129 30 11 chrX 108953840 108955667 -57694629 + Lx LINE L1 4675 6652 -2 7 1416 466 271 57 7 chrX 108955809 108955950 -57694346 + B1_Mur2 SINE Alu 2 149 0 7 1416 371 324 42 38 chrX 108955962 108956174 -57694122 + ID_B1 SINE B4 1 213 -11 7 1416 769 210 0 0 chrX 108956272 108956415 -57693881 - B1_Mur2 SINE Alu -2 147 5 7 1416 374 139 14 0 chrX 108956695 108956767 -57693529 + CT-rich Low_complexity Low_complexity 6 78 0 7 1416 411 21 0 0 chrX 108956767 108956815 -57693481 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 1416 558 0 0 0 chrX 108956815 108956876 -57693420 + (GA)n Simple_repeat Simple_repeat 2 63 0 7 1416 16145 73 13 3 chrX 108957059 108958647 -57691649 - L1_Mm LINE L1 -976 4907 3308 7 1416 2413 82 12 18 chrX 108958647 108958981 -57691315 + IAPEY3_LTR LTR ERVK 1 332 0 7 1416 16145 73 13 3 chrX 108958981 108959581 -57690715 - L1_Mm LINE L1 -2576 3307 2697 7 1416 5282 65 6 0 chrX 108959574 108960251 -57690045 + L1Md_F2 LINE L1 4906 5586 -297 7 1416 8276 44 0 0 chrX 108960251 108961247 -57689049 + L1Md_F2 LINE L1 5587 6582 0 7 1416 194 219 109 0 chrX 108961588 108961652 -57688644 - MIRc SINE MIR -116 152 82 7 1416 22 0 0 0 chrX 108961828 108961850 -57688446 + AT_rich Low_complexity Low_complexity 1 22 0 7 1416 564 91 0 0 chrX 108961953 108962041 -57688255 + (TC)n Simple_repeat Simple_repeat 2 89 0 7 1416 32 57 0 0 chrX 108962173 108962226 -57688070 + AT_rich Low_complexity Low_complexity 1 53 0 7 1416 424 272 39 28 chrX 108962749 108962927 -57687369 + L1M2 LINE L1 2965 3144 -2999 7 1416 977 259 201 17 chrX 108962945 108963353 -57686943 + Lx8 LINE L1 6989 7471 -2 7 1416 855 279 66 75 chrX 108963368 108963908 -57686388 + L1M2 LINE L1 3136 3668 -2475 7 1416 998 100 43 0 chrX 108963908 108964048 -57686248 + B1_Mus2 SINE Alu 2 147 0 7 1416 855 279 66 75 chrX 108964048 108964108 -57686188 + L1M2 LINE L1 3669 3715 -2428 7 1416 555 16 0 0 chrX 108964108 108964172 -57686124 + (TA)n Simple_repeat Simple_repeat 2 65 0 7 1416 855 279 66 75 chrX 108964172 108964210 -57686086 + L1M2 LINE L1 3716 3768 -2375 7 1416 1833 273 74 16 chrX 108964214 108964244 -57686052 + Lx8 LINE L1 6586 6624 -849 7 1416 396 0 0 0 chrX 108964244 108964288 -57686008 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1416 1833 273 74 16 chrX 108964288 108964865 -57685431 + Lx8 LINE L1 6625 7228 -245 7 1416 1524 321 90 36 chrX 108965100 108965999 -57684297 + L1M2 LINE L1 3725 4661 -1482 7 1416 198 0 0 0 chrX 108965999 108966021 -57684275 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 7 1416 1524 330 87 49 chrX 108966021 108966721 -57683575 + L1M2 LINE L1 4631 5393 -487 7 1416 1726 99 54 44 chrX 108966721 108967018 -57683278 + L1Md_F2 LINE L1 6283 6582 0 7 1416 1194 339 84 60 chrX 108967018 108967520 -57682776 + L1M2 LINE L1 5394 5877 -3 7 1416 326 117 0 0 chrX 108968229 108968289 -57682007 + L1_Mus3 LINE L1 6577 6636 -2 7 1416 437 314 25 6 chrX 108969769 108969928 -57680368 - MIR3 SINE MIR -4 204 49 7 1416 342 0 0 0 chrX 108970062 108970100 -57680196 + (TC)n Simple_repeat Simple_repeat 2 39 0 7 1416 231 103 0 0 chrX 108970113 108970152 -57680144 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 7 1416 354 324 77 7 chrX 108971030 108971173 -57679123 + MIRb SINE MIR 115 267 -1 7 1416 498 299 35 32 chrX 108971535 108971849 -57678447 + L1MA10 LINE L1 6012 6326 -8 7 1416 265 324 28 37 chrX 108971907 108972016 -57678280 - L3 LINE CR1 -1029 3460 3353 7 1416 188 290 98 107 chrX 108972072 108972184 -57678112 + MIRc SINE MIR 35 145 -123 7 1416 193 281 172 0 chrX 108972265 108972329 -57677967 + MIR SINE MIR 167 241 -21 7 1416 288 321 130 49 chrX 108973145 108973368 -57676928 - MIRc SINE MIR 0 268 28 7 1416 551 258 31 12 chrX 108973924 108974085 -57676211 + Tigger15a DNA TcMar 258 421 -294 7 1416 21 36 0 0 chrX 108975939 108975967 -57674329 + AT_rich Low_complexity Low_complexity 1 28 0 7 1416 306 0 0 0 chrX 108976225 108976259 -57674037 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1416 198 191 0 0 chrX 108976344 108976386 -57673910 + CT-rich Low_complexity Low_complexity 40 81 0 7 1416 26 0 0 0 chrX 108977901 108977927 -57672369 + AT_rich Low_complexity Low_complexity 1 26 0 7 1416 378 0 0 0 chrX 108978492 108978534 -57671762 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1416 186 133 0 0 chrX 108978612 108978642 -57671654 + (TTC)n Simple_repeat Simple_repeat 1 30 0 7 1416 260 270 16 0 chrX 108979318 108979381 -57670915 - L2c LINE L2 -10 3377 3314 7 1416 180 111 0 0 chrX 108979662 108979689 -57670607 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 1416 5835 165 41 20 chrX 108980955 108982083 -57668213 - Lx3C LINE L1 -17 7041 5783 7 1416 6805 57 38 39 chrX 108982080 108983033 -57667263 - L1_Mus1 LINE L1 0 6567 5616 7 1416 264 241 37 37 chrX 108983379 108983461 -57666835 - ID4_ SINE ID 0 83 2 7 1416 30 27 0 0 chrX 108983681 108983718 -57666578 + AT_rich Low_complexity Low_complexity 1 37 0 7 1416 6466 58 1 4 chrX 108983799 108984618 -57665678 + L1Md_F2 LINE L1 5765 6581 -1 7 1416 396 0 0 0 chrX 108984729 108984773 -57665523 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 7 1416 959 121 0 41 chrX 108984775 108984922 -57665374 - B1_Mus1 SINE Alu -6 142 2 7 1416 231 160 12 85 chrX 108985325 108985407 -57664889 + T-rich Low_complexity Low_complexity 5 80 0 7 1416 21577 109 47 8 chrX 108985580 108991060 -57659236 - L1Md_F2 LINE L1 -1 6581 630 7 1416 4761 50 2 0 chrX 108991755 108992333 -57657963 + L1Md_F2 LINE L1 5981 6559 -23 7 1416 189 0 0 0 chrX 108992333 108992354 -57657942 + (TAA)n Simple_repeat Simple_repeat 1 21 0 7 1416 614 213 78 8 chrX 108992379 108992507 -57657789 - B1_Mur4 SINE Alu 0 150 14 7 1416 1390 236 59 41 chrX 108992569 108993059 -57657237 - L1_Rod LINE L1 -483 5364 4866 7 1416 2531 173 0 5 chrX 108993325 108993748 -57656548 + MTC LTR MaLR 1 421 0 7 1416 194 303 75 15 chrX 108994061 108994128 -57656168 + MIR SINE MIR 3 73 -189 7 1416 219 302 90 40 chrX 108994255 108994355 -57655941 + MIRb SINE MIR 113 217 -51 7 1416 777 308 14 5 chrX 108995642 108995854 -57654442 + B3 SINE B2 3 216 0 7 1416 201 39 0 0 chrX 108995884 108995910 -57654386 + (CAA)n Simple_repeat Simple_repeat 1 26 0 7 1416 486 0 0 0 chrX 108996383 108996437 -57653859 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 1416 1146 264 121 53 chrX 108997154 108998137 -57652159 - L1M3 LINE L1 -503 5788 4734 7 1416 445 288 42 8 chrX 108998149 108998268 -57652028 - B1F SINE Alu -1 148 26 8 1416 369 0 0 0 chrX 108999955 108999996 -57650300 + (TC)n Simple_repeat Simple_repeat 1 41 0 8 1416 189 94 0 0 chrX 109000004 109000036 -57650260 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1416 339 327 0 9 chrX 109000197 109000305 -57649991 + PB1D10 SINE Alu 5 111 -6 2 1416 4263 192 45 72 chrX 109000355 109001352 -57648944 - Lx4B LINE L1 -5 7053 6084 3 1416 3066 139 4 4 chrX 109001354 109001837 -57648459 - L1_Mur2 LINE L1 -134 5743 5261 4 1416 286 318 180 62 chrX 109001926 109002137 -57648159 - Tigger15a DNA TcMar -192 523 288 5 1416 1134 50 0 0 chrX 109002140 109002279 -57648017 + B1_Mm SINE Alu 1 139 -8 6 1416 220 0 56 28 chrX 109002280 109002316 -57647980 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 7 1416 263 339 46 8 chrX 109002322 109002453 -57647843 + MIR SINE MIR 116 251 -11 8 1416 342 0 0 0 chrX 109002454 109002492 -57647804 + (TA)n Simple_repeat Simple_repeat 2 39 0 9 1416 306 0 0 0 chrX 109002881 109002915 -57647381 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1416 790 292 9 106 chrX 109002918 109003240 -57647056 - B4A SINE B4 0 292 2 1 1416 258 369 49 0 chrX 109003296 109003418 -57646878 + MIRb SINE MIR 60 187 -81 1 1416 277 280 86 0 chrX 109003444 109003537 -57646759 + L1ME3A LINE L1 6032 6132 -41 1 1416 198 0 0 0 chrX 109003559 109003581 -57646715 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1416 25 51 0 0 chrX 109003859 109003898 -57646398 + AT_rich Low_complexity Low_complexity 1 39 0 1 1416 211 28 56 0 chrX 109004019 109004055 -57646241 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 1 1416 1129 69 7 0 chrX 109004058 109004203 -57646093 - B1_Mm SINE Alu 0 147 2 1 1416 353 324 111 0 chrX 109004206 109004314 -57645982 - PB1D7 SINE Alu 0 120 1 1 1416 406 352 49 37 chrX 109004674 109004919 -57645377 + MIRc SINE MIR 15 262 -6 1 1416 653 251 57 52 chrX 109005450 109005698 -57644598 - L1MA9 LINE L1 0 6312 6064 2 1416 489 115 0 0 chrX 109005923 109006001 -57644295 + (TG)n Simple_repeat Simple_repeat 1 78 0 2 1416 426 20 0 0 chrX 109006505 109006556 -57643740 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1416 313 309 43 0 chrX 109007427 109007521 -57642775 + MIR3 SINE MIR 111 208 0 2 1416 267 54 0 0 chrX 109007733 109007770 -57642526 + (A)n Simple_repeat Simple_repeat 1 37 0 2 1416 22 70 0 0 chrX 109008462 109008505 -57641791 + GC_rich Low_complexity Low_complexity 1 43 0 2 1416 23 78 0 0 chrX 109008609 109008660 -57641636 + GC_rich Low_complexity Low_complexity 1 51 0 2 1416 24 0 0 0 chrX 109008719 109008743 -57641553 + GC_rich Low_complexity Low_complexity 1 24 0 2 1416 25 75 0 0 chrX 109008800 109008853 -57641443 + GC_rich Low_complexity Low_complexity 1 53 0 2 1416 230 182 82 98 chrX 109009898 109009959 -57640337 + MER89 LTR ERV1 69 128 -431 2 1416 378 295 9 9 chrX 109010865 109010971 -57639325 - MER3 DNA MER1_type -96 113 8 3 1416 208 143 0 0 chrX 109011357 109011392 -57638904 + (T)n Simple_repeat Simple_repeat 1 35 0 3 1416 576 275 43 14 chrX 109011392 109011532 -57638764 - ID_B1 SINE B4 0 224 81 3 1416 251 296 0 0 chrX 109012445 109012516 -57637780 + ID4_ SINE ID 2 72 -11 3 1416 29 28 0 0 chrX 109013119 109013155 -57637141 + AT_rich Low_complexity Low_complexity 1 36 0 3 1416 21 71 0 0 chrX 109013365 109013407 -57636889 + AT_rich Low_complexity Low_complexity 1 42 0 3 1416 619 72 0 0 chrX 109014186 109014269 -57636027 - BC1_Mm scRNA scRNA -69 83 1 3 1416 3157 268 144 30 chrX 109014345 109016351 -57633945 - Lx9 LINE L1 -8 7636 5273 3 1416 525 142 0 0 chrX 109016372 109016463 -57633833 - Lx9 LINE L1 -875 5005 4920 3 1416 12873 128 17 13 chrX 109016454 109018670 -57631626 - Lx9 LINE L1 -1792 4094 1871 3 1416 420 181 0 37 chrX 109018667 109018776 -57631520 - Lx9 LINE L1 -6049 935 831 3 1416 395 219 37 88 chrX 109018776 109019020 -57631276 - Lx9 LINE L1 -6231 753 518 3 1416 21 57 0 0 chrX 109019127 109019162 -57631134 + AT_rich Low_complexity Low_complexity 1 35 0 3 1416 335 212 114 37 chrX 109019919 109020164 -57630132 - L1MC LINE L1 -2949 3197 2934 3 1416 2669 197 12 75 chrX 109020312 109020916 -57629380 - Lx2B LINE L1 -19 6981 6416 4 1416 1507 182 6 43 chrX 109020908 109021130 -57629166 - L1_Mur2 LINE L1 -922 4955 4740 4 1416 1196 61 0 0 chrX 109021130 109021277 -57629019 - B1_Mus1 SINE Alu 0 148 2 4 1416 1507 182 6 43 chrX 109021277 109021399 -57628897 - L1_Mur2 LINE L1 -1138 4739 4624 4 1416 6903 172 87 13 chrX 109021390 109022880 -57627416 - Lx4B LINE L1 -2 7056 5346 4 1416 5211 79 18 3 chrX 109022880 109023593 -57626703 - L1Md_F2 LINE L1 -1 6581 5858 4 1416 6220 137 142 34 chrX 109023593 109023972 -57626324 - Lx4B LINE L1 -532 5345 4977 4 1416 1148 43 0 0 chrX 109023972 109024112 -57626184 + B1_Mus1 SINE Alu 1 140 -8 4 1416 6220 137 142 34 chrX 109024112 109024618 -57625678 - Lx4B LINE L1 -901 4976 4454 4 1416 3032 144 15 2 chrX 109024625 109025153 -57625143 - Lx4B LINE L1 -2187 3690 3156 4 1416 1943 189 14 3 chrX 109025191 109025546 -57624750 - Lx2B LINE L1 -425 6575 6217 4 1416 834 184 0 0 chrX 109025548 109025724 -57624572 - L1M3d LINE L1 -2233 1505 1268 4 1416 1108 88 0 0 chrX 109025747 109025894 -57624402 - B1_Mus2 SINE Alu 0 147 1 4 1416 337 244 44 11 chrX 109025977 109026068 -57624228 + PB1D10 SINE Alu 24 117 0 4 1416 220 254 0 35 chrX 109026078 109026135 -57624161 + GA-rich Low_complexity Low_complexity 5 59 0 5 1416 429 261 22 22 chrX 109026150 109026334 -57623962 - L1M3 LINE L1 -823 5317 5134 5 1416 696 245 119 11 chrX 109026406 109026691 -57623605 + L1MA6 LINE L1 5859 6174 -126 5 1416 333 155 0 0 chrX 109026761 109026819 -57623477 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 1416 5641 152 37 18 chrX 109026873 109027915 -57622381 - Lx2 LINE L1 -6 6991 5930 5 1416 4218 60 7 7 chrX 109028297 109028853 -57621443 - Lx3_Mus LINE L1 -17 6992 6437 5 1416 2663 76 3 3 chrX 109028857 109029213 -57621083 + Lx3_Mus LINE L1 6070 6425 -584 5 1416 885 334 105 19 chrX 109029398 109030055 -57620241 - Lx8 LINE L1 -231 7242 6470 5 1416 227 275 24 24 chrX 109030054 109030136 -57620160 - L1_Mur3 LINE L1 -790 5090 5009 5 1416 489 34 0 0 chrX 109030461 109030520 -57619776 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1416 257 0 30 0 chrX 109030520 109030553 -57619743 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 1416 5823 199 31 9 chrX 109030595 109031965 -57618331 - Lx4B LINE L1 0 7058 5557 6 1416 7303 127 49 7 chrX 109033223 109034440 -57615856 - Lx4A LINE L1 -2 7056 5789 6 1416 870 172 9 64 chrX 109034474 109034692 -57615604 - Lx2A1 LINE L1 0 7008 6803 6 1416 6260 107 23 3 chrX 109034692 109035604 -57614692 - Lx2A1 LINE L1 -490 6518 5589 6 1416 4100 128 101 39 chrX 109035603 109036603 -57613693 - L1_Mur2 LINE L1 -3664 2213 1150 6 1416 33240 99 24 13 chrX 109036600 109042902 -57607394 - L1Md_F2 LINE L1 -1 6581 208 6 1416 3914 178 27 41 chrX 109042891 109043676 -57606620 - L1_Mur2 LINE L1 -5913 799 26 6 1416 201 139 0 44 chrX 109043737 109043782 -57606514 + T-rich Low_complexity Low_complexity 4 46 0 6 1416 1204 53 6 12 chrX 109044383 109044553 -57605743 + (TCTA)n Simple_repeat Simple_repeat 2 170 0 6 1416 297 292 86 0 chrX 109046012 109046139 -57604157 - B1F SINE Alu -7 142 3 6 1416 258 333 75 34 chrX 109046139 109046155 -57604141 - ID_B1 SINE B4 -4 217 69 6 1416 394 18 18 18 chrX 109046267 109046323 -57603973 + (TG)n Simple_repeat Simple_repeat 1 56 0 7 1416 277 368 11 0 chrX 109046403 109046498 -57603798 - B4A SINE B4 -97 195 100 7 1416 254 343 130 0 chrX 109047530 109047638 -57602658 + MER117 DNA MER1_type 73 194 -3 7 1416 7154 70 6 2 chrX 109048040 109048972 -57601324 - L1_Mus1 LINE L1 0 6567 5632 7 1416 996 327 27 12 chrX 109049137 109049543 -57600753 - Lx9 LINE L1 -457 7187 6776 7 1416 5249 117 68 4 chrX 109049750 109050582 -57599714 - L1VL2 LINE L1 -5294 1041 156 7 1416 402 21 0 0 chrX 109050873 109050920 -57599376 + (TTA)n Simple_repeat Simple_repeat 2 48 0 7 2 5546 168 36 10 chrX 109050920 109052021 -57598275 - Lx3A LINE L1 -13 6968 5782 7 1417 374 361 15 8 chrX 109052132 109052263 -57598033 + ID_B1 SINE B4 84 215 -9 7 1417 4341 96 32 0 chrX 109052265 109052377 -57597919 + Lx3_Mus LINE L1 5921 6033 -976 7 1417 564 15 0 0 chrX 109052377 109052442 -57597854 + (GGGA)n Simple_repeat Simple_repeat 4 68 0 8 1417 4341 96 32 0 chrX 109052442 109052947 -57597349 + Lx3_Mus LINE L1 6034 6556 -453 7 1417 35 24 0 0 chrX 109053650 109053692 -57596604 + AT_rich Low_complexity Low_complexity 1 42 0 8 1417 22 0 0 0 chrX 109054314 109054336 -57595960 + AT_rich Low_complexity Low_complexity 1 22 0 8 1417 22 0 0 0 chrX 109054477 109054499 -57595797 + AT_rich Low_complexity Low_complexity 1 22 0 8 1417 26 50 0 0 chrX 109054620 109054660 -57595636 + AT_rich Low_complexity Low_complexity 1 40 0 8 1417 951 317 80 36 chrX 109055219 109055743 -57594553 - Lx8 LINE L1 0 7473 6927 8 1417 34 42 0 0 chrX 109057288 109057336 -57592960 + AT_rich Low_complexity Low_complexity 1 48 0 8 1417 450 205 105 18 chrX 109057898 109058012 -57592284 + L3 LINE CR1 2065 2188 -2301 8 1417 284 211 179 73 chrX 109057971 109058150 -57592146 - L3 LINE CR1 -2134 2355 2158 8 1417 224 122 24 0 chrX 109058375 109058416 -57591880 + (TA)n Simple_repeat Simple_repeat 1 42 0 8 1417 351 0 0 0 chrX 109058416 109058455 -57591841 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 1417 495 0 0 0 chrX 109059037 109059092 -57591204 + (TG)n Simple_repeat Simple_repeat 1 55 0 9 1417 250 194 0 27 chrX 109059446 109059520 -57590776 + GA-rich Low_complexity Low_complexity 2 73 0 9 1417 198 71 0 0 chrX 109059621 109059649 -57590647 + (CATG)n Simple_repeat Simple_repeat 2 29 0 9 1417 373 48 31 16 chrX 109059841 109059905 -57590391 + (TTTTTG)n Simple_repeat Simple_repeat 6 70 0 9 1417 1201 48 7 0 chrX 109059905 109060051 -57590245 - B1_Mm SINE Alu 0 147 1 9 1417 1025 50 0 0 chrX 109060453 109060574 -57589722 - L1_Mus3 LINE L1 -158 6480 6360 9 1417 831 103 110 0 chrX 109060580 109060726 -57589570 + L1_Mus3 LINE L1 6459 6620 -18 9 1417 207 355 72 9 chrX 109061131 109061242 -57589054 + MIR SINE MIR 30 147 -115 9 1417 23 0 0 0 chrX 109061250 109061273 -57589023 + AT_rich Low_complexity Low_complexity 1 23 0 9 1417 210 328 0 0 chrX 109061355 109061413 -57588883 + CT-rich Low_complexity Low_complexity 3 60 0 9 1417 1077 159 21 0 chrX 109061470 109061659 -57588637 - URR1A DNA MER1_type 0 226 34 1 1417 225 0 0 0 chrX 109061960 109061985 -57588311 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1417 216 236 18 0 chrX 109062085 109062140 -57588156 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 1417 198 0 0 0 chrX 109062642 109062664 -57587632 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1 1417 3449 44 28 5 chrX 109062671 109063106 -57587190 - L1Md_F2 LINE L1 -9 6573 6129 1 1417 236 346 106 57 chrX 109063157 109063298 -57586998 + B4A SINE B4 128 275 -17 1 1417 780 284 194 6 chrX 109063489 109064020 -57586276 - MER63C DNA AcHobo -48 882 252 1 1417 3563 199 55 7 chrX 109064088 109064817 -57585479 - Lx5 LINE L1 -3 7047 6284 1 1417 272 235 125 19 chrX 109064817 109064921 -57585375 - MER63C DNA AcHobo -705 225 111 1 1417 795 283 114 15 chrX 109064976 109065238 -57585058 - B4 SINE B4 -4 288 1 1 1417 22 0 0 0 chrX 109065242 109065264 -57585032 + AT_rich Low_complexity Low_complexity 1 22 0 1 1417 512 343 30 62 chrX 109065860 109066208 -57584088 - MLT1E3 LTR MaLR -199 425 89 1 1417 2612 276 112 25 chrX 109066241 109067678 -57582618 - Lx9 LINE L1 -611 7033 5421 1 1417 1402 249 114 12 chrX 109067884 109068366 -57581930 - Lx7 LINE L1 -909 6787 6257 1 1417 3557 260 47 53 chrX 109068433 109070308 -57579988 - Lx5 LINE L1 0 7050 5190 1 1417 981 158 95 21 chrX 109070309 109070529 -57579767 - RLTR17 LTR ERVK -183 238 2 1 1417 6387 186 44 52 chrX 109070531 109072135 -57578161 - RMER3D-int LTR ERVK -1 2841 1250 1 1417 741 188 25 0 chrX 109072137 109072297 -57577999 - Lx5 LINE L1 -2927 2950 2787 1 1417 23 33 0 0 chrX 109072305 109072335 -57577961 + AT_rich Low_complexity Low_complexity 1 30 0 1 1417 4863 119 75 1 chrX 109072335 109073094 -57577202 - Lx2 LINE L1 0 6997 6183 1 1417 924 275 15 49 chrX 109074120 109074384 -57575912 - Lx8 LINE L1 -541 6932 6678 1 1417 21 0 0 0 chrX 109074586 109074607 -57575689 + AT_rich Low_complexity Low_complexity 1 21 0 1 1417 5896 190 41 3 chrX 109074623 109075767 -57574529 - Lx4B LINE L1 -73 6985 5799 1 1417 838 68 30 0 chrX 109076038 109076171 -57574125 + L1Md_F2 LINE L1 6446 6582 0 1 1417 1134 75 0 0 chrX 109076268 109076415 -57573881 + B1_Mus1 SINE Alu 2 148 0 1 1417 186 71 0 0 chrX 109076426 109076454 -57573842 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 1417 24 0 0 0 chrX 109076868 109076892 -57573404 + AT_rich Low_complexity Low_complexity 1 24 0 1 1417 281 245 42 102 chrX 109079057 109079080 -57571216 + MT2B LTR ERVL 143 253 -348 1 1417 366 234 16 14 chrX 109079080 109079175 -57571121 + PB1D9 SINE Alu 3 98 -49 1 1417 222 37 0 0 chrX 109079180 109079207 -57571089 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1417 22 0 0 0 chrX 109079931 109079953 -57570343 + AT_rich Low_complexity Low_complexity 1 22 0 1 1417 180 152 0 0 chrX 109082118 109082151 -57568145 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 1 1417 25 0 0 0 chrX 109082291 109082316 -57567980 + AT_rich Low_complexity Low_complexity 1 25 0 1 1417 24 0 0 0 chrX 109082357 109082381 -57567915 + AT_rich Low_complexity Low_complexity 1 24 0 1 1417 299 416 20 0 chrX 109082623 109082724 -57567572 + PB1 SINE Alu 8 110 -17 1 1417 387 0 0 0 chrX 109082724 109082767 -57567529 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1417 268 272 64 107 chrX 109083076 109083216 -57567080 - B2_Mm2 SINE B2 -6 189 56 1 1417 416 342 72 4 chrX 109083499 109083734 -57566562 + L1MEg LINE L1 337 587 -5497 1 1417 204 241 0 18 chrX 109085303 109085358 -57564938 + GA-rich Low_complexity Low_complexity 1 54 0 1 1417 632 109 29 52 chrX 109085408 109085547 -57564749 - L1_Mus2 LINE L1 -2 6582 6447 1 1417 2328 221 91 75 chrX 109085701 109086537 -57563759 - RMER17B LTR ERVK -109 849 1 1 1417 222 200 25 0 chrX 109087147 109087187 -57563109 - Alu SINE Alu -110 65 25 1 1417 603 259 103 40 chrX 109087231 109087630 -57562666 - L1M4 LINE L1 -1435 4711 4288 1 1417 1609 242 38 0 chrX 109087633 109088029 -57562267 - RLTR40 LTR ERVK -387 430 20 1 1417 341 325 6 112 chrX 109088041 109088211 -57562085 + B4 SINE B4 140 291 -1 1 1417 1553 37 0 0 chrX 109088277 109088466 -57561830 + L1Md_F2 LINE L1 6380 6568 -14 1 1417 1756 196 116 61 chrX 109088575 109089129 -57561167 - RLTR31A_Mm LTR ERVK 0 584 1 1 1417 22 0 0 0 chrX 109089465 109089487 -57560809 + AT_rich Low_complexity Low_complexity 1 22 0 1 1417 1933 205 17 10 chrX 109089487 109089895 -57560401 - Lx2B LINE L1 -349 6651 6241 1 1417 537 16 0 0 chrX 109089946 109090008 -57560288 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 1 1417 4580 197 108 13 chrX 109090025 109090364 -57559932 - Lx4B LINE L1 -47 7003 6592 1 1417 4356 59 9 17 chrX 109090364 109090946 -57559350 + L1Md_F2 LINE L1 5992 6568 -14 1 1417 4580 162 87 9 chrX 109090946 109091663 -57558633 - Lx4B LINE L1 -443 6615 5827 1 1417 805 66 0 0 chrX 109091672 109091778 -57558518 - B1_Mus2 SINE Alu 0 147 42 1 1417 243 178 112 56 chrX 109091715 109091822 -57558474 - RLTR25B LTR ERVK -519 509 397 1 1417 375 102 16 33 chrX 109091824 109091885 -57558411 - B1_Mus1 SINE Alu -88 60 1 1 1417 253 100 100 0 chrX 109091885 109091925 -57558371 - Lx2B LINE L1 -1160 5840 5797 1 1417 5816 189 60 21 chrX 109091928 109093309 -57556987 - Lx2B LINE L1 -4 6996 5544 1 1417 668 299 141 14 chrX 109093466 109093954 -57556342 - Cheshire DNA MER1_type -17 2403 1854 1 1417 1536 295 100 25 chrX 109093960 109094760 -57555536 - Cheshire DNA MER1_type -697 1723 864 1 1417 322 251 184 46 chrX 109094781 109094872 -57555424 - Cheshire DNA MER1_type -1626 794 681 1 1417 203 0 37 0 chrX 109094872 109094899 -57555397 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 1 1417 322 251 184 46 chrX 109094899 109095003 -57555293 - Cheshire DNA MER1_type -1740 680 572 1 1417 528 115 19 9 chrX 109095034 109095139 -57555157 + (TA)n Simple_repeat Simple_repeat 1 106 0 1 1417 324 375 70 18 chrX 109095282 109095453 -57554843 - Cheshire DNA MER1_type -2030 390 211 1 1417 17724 102 15 16 chrX 109095520 109098936 -57551360 - L1_Mus2 LINE L1 -1 6565 3156 1 1417 300 294 63 32 chrX 109098936 109099031 -57551265 - MER58C DNA MER1_type -106 109 12 1 1417 391 310 10 10 chrX 109099185 109099286 -57551010 - MLT1I LTR MaLR -240 171 71 1 1417 1429 350 73 47 chrX 109099454 109100733 -57549563 - Lx8 LINE L1 -86 7387 6063 1 1417 418 303 6 22 chrX 109101676 109101700 -57548596 - L1M4 LINE L1 -698 5476 5455 1 1417 1561 74 5 0 chrX 109101700 109101915 -57548381 - L1Md_F2 LINE L1 -2 6580 6365 1 1417 30122 87 5 4 chrX 109101915 109106731 -57543565 - L1Md_F LINE L1 -458 5425 633 1 1417 1009 246 0 0 chrX 109107434 109107637 -57542659 - Lx9 LINE L1 -753 6891 6689 1 1417 1377 210 135 8 chrX 109107641 109107996 -57542300 + Lx9 LINE L1 7096 7495 -149 1 1417 3177 221 182 48 chrX 109108014 109109853 -57540443 - Lx5 LINE L1 -412 6638 4562 1 1417 3257 137 0 2 chrX 109109903 109110402 -57539894 - Lx2 LINE L1 -1 6996 6499 1 1417 334 288 123 20 chrX 109110429 109110624 -57539672 - L1MC LINE L1 -3736 2410 2196 1 1417 185 192 30 20 chrX 109111227 109111328 -57538968 + (TTA)n Simple_repeat Simple_repeat 3 104 0 1 1417 255 313 43 9 chrX 109111379 109111495 -57538801 - L1M2 LINE L1 -4233 2616 2497 1 1417 1057 252 138 21 chrX 109111530 109111915 -57538381 + Lx9 LINE L1 7214 7643 -1 1 1417 198 0 0 0 chrX 109112093 109112115 -57538181 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1 1417 2073 46 4 4 chrX 109112621 109112885 -57537411 + L1_Mus2 LINE L1 6303 6566 0 1 1417 23 54 0 0 chrX 109113019 109113056 -57537240 + AT_rich Low_complexity Low_complexity 1 37 0 1 1417 459 316 13 38 chrX 109113452 109113610 -57536686 - MER54A LTR ERVL -715 186 33 1 1417 24 0 0 0 chrX 109113791 109113815 -57536481 + AT_rich Low_complexity Low_complexity 1 24 0 1 1417 416 332 80 30 chrX 109114602 109114965 -57535331 - L1M4c LINE L1 -5294 1090 710 1 1417 180 228 0 0 chrX 109114967 109115024 -57535272 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1417 3935 115 12 53 chrX 109115610 109116135 -57534161 - Lx LINE L1 0 6654 6156 1 1417 996 88 15 0 chrX 109116135 109116272 -57534024 - B1_Mus1 SINE Alu -9 139 1 1 1417 3935 115 12 53 chrX 109116272 109116405 -57533891 - Lx LINE L1 -499 6155 6023 1 1417 32 69 0 22 chrX 109117108 109117149 -57533147 + AT_rich Low_complexity Low_complexity 1 40 0 1 1417 925 39 150 0 chrX 109117149 109117276 -57533020 + B1_Mm SINE Alu 2 147 0 1 1417 32 69 0 22 chrX 109117276 109117323 -57532973 + AT_rich Low_complexity Low_complexity 1 47 0 1 1417 1278 126 16 0 chrX 109117568 109117759 -57532537 + B2_Mm2 SINE B2 1 194 -1 1 1417 598 266 46 18 chrX 109118414 109118632 -57531664 - L1M2 LINE L1 -535 5765 5542 1 1417 34 55 0 0 chrX 109118632 109118687 -57531609 + AT_rich Low_complexity Low_complexity 1 55 0 1 1417 327 25 0 0 chrX 109118762 109118802 -57531494 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1417 2141 221 47 12 chrX 109118852 109119361 -57530935 - RLTR20B3 LTR ERVK -54 514 1 1 1417 730 286 79 11 chrX 109119379 109119676 -57530620 - Lx7 LINE L1 -247 7226 6898 1 1417 315 0 0 0 chrX 109119676 109119711 -57530585 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1417 471 272 52 13 chrX 109119724 109119877 -57530419 - Lx7 LINE L1 -936 6537 6379 1 1417 251 276 176 11 chrX 109119920 109120107 -57530189 - L1_Rod LINE L1 -493 5354 5137 1 1417 1924 146 88 8 chrX 109120123 109120497 -57529799 + L1_Mur2 LINE L1 3670 4073 -1804 1 1417 3001 137 13 21 chrX 109120575 109121098 -57529198 + Lx2 LINE L1 6477 6995 -2 1 1417 283 211 0 17 chrX 109121393 109121451 -57528845 + Tigger1 DNA MER2_type 490 546 -1872 1 1417 275 338 142 65 chrX 109121477 109121737 -57528559 + L1ME3 LINE L1 5822 6101 -61 1 1417 2078 240 82 62 chrX 109121772 109122451 -57527845 - RLTR40 LTR ERVK -13 804 112 1 1417 230 167 0 53 chrX 109122540 109122597 -57527699 - Charlie1b DNA MER1_type -145 378 325 1 1417 397 293 24 16 chrX 109122700 109122825 -57527471 - Charlie1b DNA MER1_type -388 135 10 1 1417 23 54 0 0 chrX 109122992 109123029 -57527267 + AT_rich Low_complexity Low_complexity 1 37 0 1 1417 1885 271 21 25 chrX 109123102 109123586 -57526710 + Lx6 LINE L1 6955 7436 -24 1 1417 309 303 42 79 chrX 109123704 109123894 -57526402 + L1ME1 LINE L1 5823 6005 -174 1 1417 261 0 0 0 chrX 109125189 109125218 -57525078 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 1417 187 54 54 0 chrX 109126737 109126774 -57523522 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1417 1174 76 6 0 chrX 109127165 109127336 -57522960 - L1_Mus4 LINE L1 -5 6631 6460 2 1417 230 290 27 55 chrX 109127362 109127435 -57522861 + ID4_ SINE ID 2 72 -11 2 1417 237 330 11 11 chrX 109127740 109127829 -57522467 - MIRb SINE MIR -120 148 60 2 1417 229 136 15 15 chrX 109128016 109128083 -57522213 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 2 1417 1070 96 0 0 chrX 109128089 109128235 -57522061 - B1_Mm SINE Alu 0 147 2 2 1417 422 292 9 0 chrX 109128790 109128903 -57521393 + PB1D10 SINE Alu 1 114 -3 2 1417 510 99 33 0 chrX 109128951 109129042 -57521254 + (TC)n Simple_repeat Simple_repeat 2 95 0 2 1417 237 108 0 0 chrX 109129045 109129082 -57521214 + (TATG)n Simple_repeat Simple_repeat 2 38 0 2 1417 276 158 105 0 chrX 109129088 109129145 -57521151 - L1MA7 LINE L1 -75 6216 6154 2 1417 180 211 0 26 chrX 109129377 109129416 -57520880 + L2 LINE L2 1279 1316 -2103 2 1417 228 195 40 121 chrX 109129622 109129721 -57520575 + L1MA7 LINE L1 6047 6137 -154 2 1417 490 136 39 10 chrX 109129842 109129946 -57520350 - Lx2 LINE L1 -6 6991 6885 2 1417 236 54 0 51 chrX 109129947 109129986 -57520310 + (CCCA)n Simple_repeat Simple_repeat 1 37 0 2 1417 25 83 0 0 chrX 109130461 109130521 -57519775 + AT_rich Low_complexity Low_complexity 1 60 0 2 1417 613 284 104 72 chrX 109130555 109130639 -57519657 - ORR1E LTR MaLR -7 352 265 2 1417 1129 43 0 7 chrX 109130639 109130779 -57519517 + B1_Mus2 SINE Alu 1 139 -8 2 1417 297 0 0 0 chrX 109130789 109130822 -57519474 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2 1417 613 284 104 72 chrX 109130822 109131033 -57519263 - ORR1E LTR MaLR -101 258 36 2 1417 1587 199 46 26 chrX 109131237 109131439 -57518857 - ORR1D1 LTR MaLR 0 374 171 2 1417 549 0 0 0 chrX 109131439 109131500 -57518796 + (GA)n Simple_repeat Simple_repeat 1 61 0 2 1417 1587 199 46 26 chrX 109131500 109131648 -57518648 - ORR1D1 LTR MaLR -204 170 17 2 1417 24 32 0 0 chrX 109132242 109132273 -57518023 + AT_rich Low_complexity Low_complexity 1 31 0 2 1417 28 48 0 0 chrX 109132730 109132772 -57517524 + AT_rich Low_complexity Low_complexity 1 42 0 2 1417 338 305 12 0 chrX 109133361 109133443 -57516853 - Arthur1B DNA Tip100 -1142 83 1 2 1417 191 32 65 0 chrX 109133455 109133486 -57516810 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 2 1417 252 353 64 48 chrX 109133788 109133913 -57516383 - B1_Mus2 SINE Alu -20 127 1 2 1417 386 321 9 18 chrX 109133803 109133914 -57516382 - ID_B1 SINE B4 -34 190 81 2 1417 26 74 0 0 chrX 109134512 109134566 -57515730 + AT_rich Low_complexity Low_complexity 1 54 0 2 1417 330 244 84 11 chrX 109135208 109135313 -57514983 + Lx9 LINE L1 7052 7152 -492 2 1417 229 318 91 0 chrX 109136074 109136184 -57514112 + L1MEg LINE L1 49 168 -5916 2 1417 216 111 0 0 chrX 109136243 109136279 -57514017 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2 1417 939 241 70 26 chrX 109136287 109136675 -57513621 + L1MEg LINE L1 1336 1740 -4344 2 1417 537 16 0 0 chrX 109137215 109137277 -57513019 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 2 1417 312 310 80 40 chrX 109137717 109137868 -57512428 + MER5A DNA MER1_type 8 164 -25 2 1417 18877 205 47 25 chrX 109138523 109141164 -57509132 - Lx5 LINE L1 -3 7047 4360 2 1417 297 0 0 0 chrX 109141164 109141197 -57509099 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1417 18877 187 65 28 chrX 109141197 109144086 -57506210 - Lx5 LINE L1 -1518 4359 1350 2 1417 2336 106 95 3 chrX 109144054 109144412 -57505884 - L1VL2 LINE L1 -5538 797 407 2 1417 203 179 0 0 chrX 109144417 109144456 -57505840 + T-rich Low_complexity Low_complexity 1 39 0 2 1417 31884 97 13 13 chrX 109144463 109150609 -57499687 - L1_Mus2 LINE L1 0 6567 423 2 1417 4003 43 0 2 chrX 109150995 109151481 -57498815 + L1Md_F2 LINE L1 6098 6582 0 2 1417 387 0 0 0 chrX 109151497 109151540 -57498756 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2 1417 2330 106 40 29 chrX 109151754 109152133 -57498163 - Lx LINE L1 0 6654 6272 2 1417 486 0 0 0 chrX 109152147 109152201 -57498095 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 1417 227 280 94 94 chrX 109152610 109152626 -57497670 + LTR81B LTR ERV1? 140 154 -1239 2 1417 2097 113 12 3 chrX 109152626 109152955 -57497341 - L1_Mus3 LINE L1 -2 6636 6305 2 1417 227 280 94 94 chrX 109152955 109153119 -57497177 + LTR81B LTR ERV1? 155 320 -1073 2 1417 266 148 19 0 chrX 109153347 109153401 -57496895 + GA-rich Low_complexity Low_complexity 3 57 0 2 1417 23 0 0 0 chrX 109153504 109153527 -57496769 + AT_rich Low_complexity Low_complexity 1 23 0 2 1417 21 57 0 0 chrX 109153875 109153910 -57496386 + AT_rich Low_complexity Low_complexity 1 35 0 2 1417 376 297 35 13 chrX 109154010 109154206 -57496090 + L1MA5 LINE L1 5704 5917 -383 2 1417 2343 105 40 3 chrX 109155426 109155778 -57494518 + L1_Mus2 LINE L1 6201 6565 -1 2 1417 441 0 0 0 chrX 109156011 109156060 -57494236 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1417 24 32 0 0 chrX 109156342 109156373 -57493923 + AT_rich Low_complexity Low_complexity 1 31 0 2 1417 255 339 61 61 chrX 109157531 109157663 -57492633 + MER34A LTR ERV1 5 136 -435 2 1417 1007 116 0 55 chrX 109158970 109159153 -57491143 + L1Md_F2 LINE L1 6410 6582 0 2 1417 24 32 0 0 chrX 109159870 109159901 -57490395 + AT_rich Low_complexity Low_complexity 1 31 0 2 1417 636 329 117 49 chrX 109159984 109160412 -57489884 - MLT1C LTR MaLR -9 458 2 2 1417 6545 123 36 44 chrX 109160787 109161989 -57488307 - Lx3A LINE L1 -7 6974 5783 2 1417 225 159 0 0 chrX 109161989 109162033 -57488263 + T-rich Low_complexity Low_complexity 2 45 0 2 1417 7243 86 7 1 chrX 109162080 109163400 -57486896 - L1Md_F2 LINE L1 -13 6569 5241 2 1417 27860 80 5 10 chrX 109163391 109168813 -57481483 - L1Md_F2 LINE L1 -12 6570 1176 2 1417 5724 68 8 6 chrX 109168804 109169591 -57480705 - L1_Mm LINE L1 -806 5077 4290 2 1417 17709 94 32 16 chrX 109169591 109170730 -57479566 - L1_Mur1 LINE L1 -85 5801 4645 2 1417 189 0 0 0 chrX 109170730 109170751 -57479545 + (GTTTG)n Simple_repeat Simple_repeat 4 24 0 2 1417 17709 94 32 16 chrX 109170751 109172370 -57477926 - L1_Mur1 LINE L1 -1242 4644 2999 2 1417 464 229 132 13 chrX 109172371 109172530 -57477766 - L1_Mur1 LINE L1 -6804 178 1 2 1417 413 337 37 20 chrX 109172696 109172990 -57477306 - L1M4 LINE L1 -5884 658 360 2 1417 328 309 73 11 chrX 109173031 109173208 -57477088 - L1M4 LINE L1 -6342 200 13 2 1417 324 0 0 0 chrX 109173710 109173746 -57476550 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2 1417 1213 14 0 0 chrX 109173748 109173889 -57476407 - B1_Mus2 SINE Alu -6 141 1 2 1417 250 297 91 25 chrX 109174306 109174427 -57475869 + Tigger9a DNA Tigger 599 727 -5 2 1417 4040 89 2 3 chrX 109174531 109175095 -57475201 - L1_Mus1 LINE L1 -1 6566 6004 2 1417 22 0 0 0 chrX 109175445 109175467 -57474829 + AT_rich Low_complexity Low_complexity 1 22 0 2 1417 298 318 71 66 chrX 109175484 109175666 -57474630 - Charlie26a DNA MER1_type -53 272 90 2 1417 1110 42 0 0 chrX 109175786 109175930 -57474366 - L1Md_A LINE L1 -1 6581 6438 2 1417 474 132 0 0 chrX 109176976 109177052 -57473244 + (TA)n Simple_repeat Simple_repeat 2 77 0 2 1417 24 32 0 0 chrX 109177119 109177150 -57473146 + AT_rich Low_complexity Low_complexity 1 31 0 2 1417 257 346 9 9 chrX 109178023 109178128 -57472168 - MIRb SINE MIR -46 222 118 2 1417 1237 282 65 83 chrX 109178490 109178637 -57471659 - L1MA8 LINE L1 -189 6111 5969 2 1417 285 51 0 0 chrX 109178637 109178676 -57471620 + (TTG)n Simple_repeat Simple_repeat 1 39 0 2 1417 243 0 0 0 chrX 109178676 109178703 -57471593 + (TTGG)n Simple_repeat Simple_repeat 2 28 0 2 1417 1092 70 0 0 chrX 109178709 109178852 -57471444 - B1_Mus1 SINE Alu -5 143 1 2 1417 1378 266 71 53 chrX 109178852 109179068 -57471228 - L1MA8 LINE L1 -332 5968 5780 2 1417 249 33 0 0 chrX 109179068 109179098 -57471198 + (GA)n Simple_repeat Simple_repeat 1 30 0 2 1417 2448 275 83 50 chrX 109179098 109180691 -57469605 - L1MA8 LINE L1 -521 5779 4149 2 1417 186 43 0 0 chrX 109180691 109180714 -57469582 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1417 2448 284 86 59 chrX 109180714 109181411 -57468885 - L1MA8 LINE L1 -1995 4148 3420 2 1417 491 302 110 6 chrX 109181671 109181844 -57468452 + MIR SINE MIR 41 231 -31 2 1417 675 128 0 0 chrX 109182520 109182614 -57467682 - RMER6C LTR ERVK -596 94 1 2 177 1501 232 201 79 chrX 109182657 109183234 -57467062 - RLTR40 LTR ERVK -40 777 131 2 1418 498 99 12 13 chrX 109183230 109183329 -57466967 + B1_Mus2 SINE Alu 47 148 -1 2 1418 305 312 13 0 chrX 109183352 109183429 -57466867 - RSINE1 SINE B4 -85 80 3 2 1418 263 274 0 0 chrX 109183451 109183502 -57466794 + RSINE1 SINE B4 98 148 -17 2 1418 542 103 11 0 chrX 109183504 109183591 -57466705 + (TGAA)n Simple_repeat Simple_repeat 3 90 0 2 1418 302 80 20 0 chrX 109183639 109183689 -57466607 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 2 1418 239 230 40 13 chrX 109183979 109184054 -57466242 - RLTR40 LTR ERVK -716 101 25 2 1418 771 308 54 0 chrX 109184767 109185007 -57465289 - Lx7 LINE L1 -612 7084 6832 2 1418 2518 95 8 13 chrX 109185006 109185379 -57464917 + L1_Mus3 LINE L1 6248 6618 -20 2 1418 1813 307 90 48 chrX 109185391 109186294 -57464002 - Lx7 LINE L1 -859 6837 5897 2 1418 225 292 0 15 chrX 109187441 109187507 -57462789 + CT-rich Low_complexity Low_complexity 1 65 0 2 1418 4523 54 19 7 chrX 109187538 109188116 -57462180 + L1_Mus1 LINE L1 5983 6567 0 2 1418 204 171 0 24 chrX 109188293 109188335 -57461961 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2 1418 453 351 39 7 chrX 109188335 109188490 -57461806 - RSINE1 SINE B4 0 165 6 2 1418 575 189 8 0 chrX 109188840 109188962 -57461334 + (TA)n Simple_repeat Simple_repeat 2 124 0 2 1418 510 300 88 120 chrX 109189069 109189501 -57460795 - RLTR23 LTR ERV1 -4 426 9 2 1418 411 263 203 0 chrX 109189779 109189912 -57460384 + RSINE1 SINE B4 4 163 -2 2 1418 417 153 0 0 chrX 109189913 109189985 -57460311 + (CA)n Simple_repeat Simple_repeat 2 73 0 2 1418 423 0 0 0 chrX 109189985 109190032 -57460264 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 1418 13478 113 18 14 chrX 109190046 109192613 -57457683 + L1VL4 LINE L1 401 2978 -581 2 1418 23614 163 18 9 chrX 109192614 109197185 -57453111 + Lx LINE L1 1381 5997 -657 3 1418 1354 136 153 7 chrX 109197185 109197460 -57452836 - RLTR10A LTR ERVK 0 411 97 3 1418 4158 121 11 3 chrX 109197499 109198129 -57452167 + Lx LINE L1 5993 6627 -27 3 1418 2290 195 57 35 chrX 109198296 109198839 -57451457 - Lx4B LINE L1 -4 7054 6500 3 1418 24 53 0 0 chrX 109199062 109199100 -57451196 + AT_rich Low_complexity Low_complexity 1 38 0 3 1418 377 321 0 27 chrX 109199151 109199263 -57451033 + RSINE1 SINE B4 57 165 0 3 1418 717 328 41 4 chrX 109199327 109199572 -57450724 + Lx6 LINE L1 7146 7399 -61 3 1418 3252 43 5 0 chrX 109200887 109201281 -57449015 - MTA_Mm LTR MaLR 0 396 1 3 1418 326 276 0 0 chrX 109201670 109201728 -57448568 + MTD LTR MaLR 130 187 -232 3 1418 626 199 23 15 chrX 109201747 109201880 -57448416 + MTD LTR MaLR 272 405 -14 3 1418 729 300 191 50 chrX 109201950 109202556 -57447740 - L1M2 LINE L1 -863 5280 4575 3 1418 227 31 0 30 chrX 109202556 109202589 -57447707 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 3 1418 1025 68 0 0 chrX 109202591 109202724 -57447572 - B1_Mus1 SINE Alu -11 137 5 3 1418 416 300 199 51 chrX 109202724 109202881 -57447415 - L1M2 LINE L1 -1566 4574 4406 3 1418 4354 201 117 22 chrX 109202923 109203990 -57446306 - MTC-int LTR MaLR -80 1178 10 3 1418 7532 127 10 20 chrX 109203990 109205312 -57444984 - MusHAL1 LINE L1 -437 2275 967 3 1418 28 0 0 0 chrX 109206003 109206031 -57444265 + AT_rich Low_complexity Low_complexity 1 28 0 3 1418 1132 169 72 0 chrX 109208474 109208681 -57441615 + URR1A DNA MER1_type 5 226 0 3 1418 371 316 183 6 chrX 109208810 109208985 -57441311 - MIR SINE MIR -56 206 1 3 1418 536 340 5 46 chrX 109209248 109209442 -57440854 + B4A SINE B4 101 286 -6 3 1418 1167 61 0 0 chrX 109209581 109209728 -57440568 + B1_Mus2 SINE Alu 1 147 0 3 1418 393 75 0 0 chrX 109209728 109209781 -57440515 + (A)n Simple_repeat Simple_repeat 1 53 0 3 1418 1416 204 27 95 chrX 109209890 109210291 -57440005 - ORR1D1 LTR MaLR 0 374 1 3 1418 1329 114 106 78 chrX 109210858 109211114 -57439182 - Lx LINE L1 -7 6647 6385 3 1418 1311 79 45 0 chrX 109212259 109212437 -57437859 - B2_Mm2 SINE B2 -8 187 2 3 1418 293 326 12 0 chrX 109212824 109212910 -57437386 - MER68-int LTR ERVL -286 2704 2618 3 1418 632 347 80 25 chrX 109212921 109213282 -57437014 - MER68-int LTR ERVL -411 2579 2199 3 1418 2622 72 0 3 chrX 109213286 109213632 -57436664 - L1_Mus1 LINE L1 0 6567 6223 3 1418 2548 51 0 0 chrX 109213632 109213948 -57436348 + L1_Mus1 LINE L1 5912 6227 -340 3 1418 261 0 0 0 chrX 109213948 109213977 -57436319 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1418 950 308 138 18 chrX 109213977 109214702 -57435594 - MER68-int LTR ERVL -785 2205 1393 3 1418 1445 75 9 5 chrX 109214708 109214921 -57435375 + L1_Mus3 LINE L1 6419 6632 -6 3 1418 340 327 76 22 chrX 109215175 109215400 -57434896 - MER68-int LTR ERVL -2010 980 744 3 1418 6108 140 69 34 chrX 109215430 109216574 -57433722 - Lx3C LINE L1 0 7058 5796 3 1418 5369 70 34 5 chrX 109216574 109217317 -57432979 - Lx3_Mus LINE L1 -1 7008 6245 3 1418 6108 138 70 32 chrX 109217317 109217352 -57432944 - Lx3C LINE L1 -1181 5795 5761 3 1418 500 86 16 0 chrX 109217349 109217433 -57432863 - L1_Mur1 LINE L1 -3467 2380 2274 3 1418 10366 150 79 8 chrX 109217430 109220006 -57430290 - L1_Mur1 LINE L1 -2612 3274 3 3 1418 1084 277 49 26 chrX 109220522 109221015 -57429281 - L1MA7 LINE L1 -464 5827 5324 3 1418 5818 210 25 15 chrX 109221029 109222260 -57428036 - Lx7 LINE L1 -671 7025 5782 3 1418 3197 169 27 5 chrX 109222276 109222840 -57427456 - Lx4B LINE L1 0 7058 6483 3 1418 9355 132 27 12 chrX 109222840 109223674 -57426622 - L1_Mur2 LINE L1 -2963 2914 2061 3 1418 374 100 0 16 chrX 109223674 109223735 -57426561 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1418 9355 132 30 12 chrX 109223735 109224675 -57425621 - L1_Mur2 LINE L1 -3817 2060 1109 3 1418 7802 124 35 10 chrX 109224701 109226197 -57424099 - Lx3B LINE L1 -4 6969 5427 3 1418 439 188 62 34 chrX 109226233 109226361 -57423935 - Lx9 LINE L1 -1 7643 7510 3 1418 267 31 0 0 chrX 109226361 109226393 -57423903 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1418 439 188 62 34 chrX 109226393 109226440 -57423856 - Lx9 LINE L1 -135 7509 7463 3 1418 279 0 0 0 chrX 109226702 109226733 -57423563 + (CATA)n Simple_repeat Simple_repeat 1 31 0 3 1418 1805 145 21 28 chrX 109226763 109227090 -57423206 - Lx3B LINE L1 -3 6970 6646 3 1418 784 126 63 18 chrX 109227090 109227234 -57423062 - Lx3B LINE L1 -926 6047 5906 3 1418 294 265 148 57 chrX 109227243 109227595 -57422701 - L1M4c LINE L1 -3523 2853 2470 3 1418 233 119 24 0 chrX 109227782 109227824 -57422472 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 1418 33 43 0 0 chrX 109228043 109228090 -57422206 + AT_rich Low_complexity Low_complexity 1 47 0 3 1418 586 341 69 71 chrX 109228165 109228738 -57421558 - L1M4c LINE L1 -4505 1973 1253 3 1418 21 36 0 0 chrX 109229147 109229175 -57421121 + AT_rich Low_complexity Low_complexity 1 28 0 3 1418 3795 76 10 8 chrX 109229175 109229691 -57420605 - Lx3_Mus LINE L1 -8 7001 6485 3 1418 734 284 42 14 chrX 109229707 109230064 -57420232 - L1M3de LINE L1 -4705 1948 1582 3 1418 6074 127 36 38 chrX 109230581 109231647 -57418649 - Lx2B LINE L1 -4 6996 5933 3 1418 3071 76 80 11 chrX 109231659 109232098 -57418198 - L1_Mus1 LINE L1 0 6567 6099 3 1418 207 0 0 0 chrX 109235595 109235618 -57414678 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3 1418 22 35 0 0 chrX 109235769 109235798 -57414498 + AT_rich Low_complexity Low_complexity 1 29 0 3 1418 255 61 0 0 chrX 109237007 109237040 -57413256 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 3 1418 4156 52 2 4 chrX 109237454 109237975 -57412321 - L1Md_F2 LINE L1 0 6582 6063 3 1418 28 0 0 0 chrX 109238463 109238491 -57411805 + AT_rich Low_complexity Low_complexity 1 28 0 3 1418 327 189 31 16 chrX 109238782 109238911 -57411385 + (TA)n Simple_repeat Simple_repeat 1 131 0 3 1418 491 288 23 31 chrX 109239041 109239170 -57411126 + B1_Mur1 SINE Alu 22 149 0 3 1418 256 271 0 0 chrX 109239770 109239829 -57410467 - MIR SINE MIR -104 158 100 3 1418 1026 95 41 6 chrX 109239838 109240008 -57410288 + L1_Mus3 LINE L1 6463 6638 0 3 1418 21 0 0 0 chrX 109240288 109240309 -57409987 + AT_rich Low_complexity Low_complexity 1 21 0 3 1418 585 0 0 0 chrX 109241215 109241280 -57409016 + (GAAA)n Simple_repeat Simple_repeat 4 68 0 3 1418 195 204 0 0 chrX 109241353 109241402 -57408894 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1418 2230 104 23 9 chrX 109241882 109242230 -57408066 + Lx3_Mus LINE L1 6652 7004 -5 3 1418 1000 268 7 65 chrX 109242242 109242533 -57407763 + Lx5 LINE L1 6774 7047 -3 3 1418 5870 232 65 36 chrX 109242891 109244879 -57405417 - Lx9 LINE L1 -1686 5958 3881 3 1418 891 166 6 6 chrX 109244887 109245051 -57405245 - L1_Mur2 LINE L1 -967 4910 4747 3 1418 357 24 0 0 chrX 109245069 109245111 -57405185 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 3 1418 666 274 23 10 chrX 109245123 109245386 -57404910 - Lx9 LINE L1 -2648 3495 3204 3 1418 737 275 81 21 chrX 109245438 109245821 -57404475 - Lx9 LINE L1 -6300 1308 903 3 1418 1828 126 28 0 chrX 109245823 109246141 -57404155 - L1_Mur2 LINE L1 -2494 3383 3057 3 1418 437 137 0 0 chrX 109246162 109246235 -57404061 - L1_Mur2 LINE L1 -2992 2885 2813 3 1418 251 262 49 12 chrX 109246284 109246365 -57403931 - B4A SINE B4 -14 278 195 3 1418 1250 114 14 32 chrX 109247603 109247821 -57402475 + Lx LINE L1 6427 6640 -14 3 1418 1265 32 8 35 chrX 109247821 109248079 -57402217 + (TAGA)n Simple_repeat Simple_repeat 1 250 0 3 1418 270 81 0 0 chrX 109248081 109248118 -57402178 + (TGGA)n Simple_repeat Simple_repeat 3 39 0 3 1418 1286 47 13 24 chrX 109248133 109248894 -57401402 + (TAGA)n Simple_repeat Simple_repeat 1 752 0 3 1418 182 319 24 72 chrX 109249727 109249852 -57400444 - MER5A DNA MER1_type -6 183 65 3 1418 1009 190 53 40 chrX 109250259 109250484 -57399812 - Lx4A LINE L1 -3 7055 6828 3 1418 187 239 0 61 chrX 109251124 109251173 -57399123 + MIR SINE MIR 86 131 -77 3 1418 11399 92 7 2 chrX 109251217 109253496 -57396800 - L1_Mus2 LINE L1 0 6566 4274 3 1418 21441 75 2 4 chrX 109253509 109257161 -57393135 - L1Md_F3 LINE L1 -15 6569 2923 3 1418 208 162 0 0 chrX 109257260 109257297 -57392999 - L2a LINE L2 -289 3137 3101 3 1418 469 240 94 50 chrX 109257847 109258027 -57392269 - Lx2B LINE L1 -1 6999 6812 3 1418 243 0 0 0 chrX 109258410 109258437 -57391859 + (TC)n Simple_repeat Simple_repeat 2 28 0 3 1418 378 0 0 0 chrX 109258437 109258478 -57391818 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1418 39039 34 0 0 chrX 109258661 109264074 -57386222 - L1Md_T LINE L1 0 6582 1170 3 1418 5487 171 19 25 chrX 109264080 109265423 -57384873 - L1Md_T LINE L1 -5411 1205 99 3 1418 22 80 0 0 chrX 109265432 109265482 -57384814 + AT_rich Low_complexity Low_complexity 1 50 0 3 1418 907 245 39 0 chrX 109265823 109266027 -57384269 + B3 SINE B2 5 216 0 3 1418 897 299 15 0 chrX 109266060 109266264 -57384032 + ID_B1 SINE B4 13 219 -5 3 1418 221 337 90 18 chrX 109266338 109266504 -57383792 + MIR3 SINE MIR 21 198 -10 3 1418 24 0 0 0 chrX 109267493 109267517 -57382779 + AT_rich Low_complexity Low_complexity 1 24 0 3 1418 505 232 91 7 chrX 109267677 109267820 -57382476 + Lx4B LINE L1 6900 7054 -4 3 1418 6765 117 38 19 chrX 109267986 109269094 -57381202 - Lx3_Mus LINE L1 -8 7001 5873 3 1418 24773 102 48 68 chrX 109269095 109271129 -57379167 - Lx6 LINE L1 -1827 5633 3651 3 1418 360 0 0 0 chrX 109271129 109271169 -57379127 + (TTG)n Simple_repeat Simple_repeat 2 41 0 3 1418 24773 102 45 63 chrX 109271169 109273785 -57376511 - Lx6 LINE L1 -2236 3650 1011 3 1418 1012 83 0 0 chrX 109273791 109273924 -57376372 + L1_Mus3 LINE L1 6397 6529 -109 3 1418 832 191 36 0 chrX 109273928 109274096 -57376200 - Lx6 LINE L1 -5982 1002 829 3 1418 936 82 0 0 chrX 109274070 109274192 -57376104 + Lx3A LINE L1 5656 5777 -1204 3 1418 490 323 72 10 chrX 109274222 109274416 -57375880 + MIR SINE MIR 5 210 -52 3 1418 1306 311 79 15 chrX 109274478 109274957 -57375339 - Lx8 LINE L1 -323 7150 6641 3 1418 2140 294 45 37 chrX 109274955 109275855 -57374441 - Lx8 LINE L1 -488 6985 6049 3 1418 29 0 0 0 chrX 109277454 109277483 -57372813 + AT_rich Low_complexity Low_complexity 1 29 0 3 1418 37292 45 2 4 chrX 109277514 109283463 -57366833 - L1Md_F3 LINE L1 -4 6580 641 3 1418 474 18 0 0 chrX 109283977 109284032 -57366264 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 1418 24 53 0 0 chrX 109284522 109284560 -57365736 + AT_rich Low_complexity Low_complexity 1 38 0 3 1418 22 0 0 0 chrX 109285918 109285940 -57364356 + AT_rich Low_complexity Low_complexity 1 22 0 4 1418 1027 90 0 0 chrX 109286131 109286264 -57364032 + B1_Mus2 SINE Alu 2 134 -13 4 1418 225 0 0 0 chrX 109286264 109286289 -57364007 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 4 1418 578 183 8 0 chrX 109286355 109286475 -57363821 + (TATG)n Simple_repeat Simple_repeat 4 124 0 4 1418 722 247 89 25 chrX 109286880 109287196 -57363100 - Lx9 LINE L1 -1 7643 7308 4 1418 25 31 0 0 chrX 109287731 109287763 -57362533 + AT_rich Low_complexity Low_complexity 1 32 0 4 1418 24 77 0 0 chrX 109287833 109287885 -57362411 + AT_rich Low_complexity Low_complexity 1 52 0 4 1418 11659 34 2 2 chrX 109287946 109290013 -57360283 - L1Md_F2 LINE L1 -3 6579 4511 4 1418 306 87 0 0 chrX 109290375 109290421 -57359875 + (ATG)n Simple_repeat Simple_repeat 3 48 0 4 1418 1014 312 20 44 chrX 109291407 109291859 -57358437 - Lx8 LINE L1 -50 7423 6983 4 1418 25 31 0 0 chrX 109292254 109292286 -57358010 + AT_rich Low_complexity Low_complexity 1 32 0 4 1418 10472 129 31 9 chrX 109293074 109295030 -57355266 - Lx3B LINE L1 -2 6971 4970 4 1418 3748 44 2 2 chrX 109295030 109295490 -57354806 - L1_Mus1 LINE L1 0 6567 6108 4 1418 10472 122 18 5 chrX 109295490 109296215 -57354081 - Lx3B LINE L1 -917 4969 4234 4 1418 288 214 14 0 chrX 109296333 109296403 -57353893 - Lx3B LINE L1 -6151 833 763 4 1418 406 346 125 53 chrX 109296628 109297245 -57353051 + L1M5 LINE L1 4405 5065 -1081 4 1418 262 398 80 25 chrX 109299298 109299574 -57350722 + L2b LINE L2 2920 3210 -177 4 1418 23 0 0 0 chrX 109299610 109299633 -57350663 + AT_rich Low_complexity Low_complexity 1 23 0 4 1418 44 75 0 0 chrX 109301243 109301336 -57348960 + AT_rich Low_complexity Low_complexity 1 93 0 4 1418 253 330 98 89 chrX 109301671 109301917 -57348379 - LTR52 LTR ERVL -14 407 160 4 1418 1259 78 11 11 chrX 109302309 109302490 -57347806 + B2_Mm2 SINE B2 5 185 -10 4 1418 22 0 0 0 chrX 109302495 109302517 -57347779 + AT_rich Low_complexity Low_complexity 1 22 0 4 1418 8200 151 16 8 chrX 109302517 109303982 -57346314 - L1_Mur2 LINE L1 -472 5405 3929 4 1418 3071 122 8 10 chrX 109303981 109304488 -57345808 - MusHAL1 LINE L1 -1287 1425 920 4 1418 2588 92 13 2 chrX 109304488 109304882 -57345414 - L1_Mus3 LINE L1 -1 6637 6240 4 1418 233 211 42 0 chrX 109305803 109305874 -57344422 + (TAGA)n Simple_repeat Simple_repeat 1 74 0 4 1418 944 192 5 68 chrX 109306467 109306657 -57343639 - URR1B DNA MER1_type -47 178 1 4 1418 358 350 99 35 chrX 109307142 109307595 -57342701 - L2 LINE L2 -661 2758 2277 4 1418 4135 57 0 6 chrX 109307768 109308296 -57342000 + L1Md_F2 LINE L1 6058 6582 0 4 1418 24 0 0 0 chrX 109309317 109309341 -57340955 + AT_rich Low_complexity Low_complexity 1 24 0 4 1418 22 70 0 0 chrX 109310191 109310234 -57340062 + AT_rich Low_complexity Low_complexity 1 43 0 4 1418 422 269 0 0 chrX 109310444 109310537 -57339759 + 5S rRNA rRNA 4 96 -25 4 1418 267 122 0 0 chrX 109310832 109310881 -57339415 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 1418 5287 20 0 0 chrX 109311024 109311813 -57338483 - L1Md_A LINE L1 -513 6069 5281 4 1418 4221 34 0 0 chrX 109311842 109312339 -57337957 + L1Md_T LINE L1 6085 6581 -1 4 1418 320 239 111 35 chrX 109312456 109312723 -57337573 + L1M4c LINE L1 2138 2425 -3951 4 1418 6842 75 83 10 chrX 109312736 109313913 -57336383 - L1_Mus3 LINE L1 0 6638 5381 4 1419 328 374 8 50 chrX 109314096 109314217 -57336079 + RSINE1 SINE B4 25 140 -25 4 1419 8125 20 0 0 chrX 109314320 109315251 -57335045 - L1Md_A LINE L1 0 6582 5652 4 1419 242 266 45 45 chrX 109315253 109315387 -57334909 + L1M4c LINE L1 2914 3047 -3335 4 1419 3755 50 2 2 chrX 109316039 109316500 -57333796 - L1_Mus1 LINE L1 -1 6566 6106 4 1419 2313 76 0 0 chrX 109316500 109316802 -57333494 + L1_Mus1 LINE L1 5775 6076 -491 4 1419 476 228 28 45 chrX 109317011 109317190 -57333106 + L1M4c LINE L1 3079 3254 -3122 4 1419 1172 256 109 27 chrX 109317194 109317486 -57332810 - MTD LTR MaLR -3 416 95 4 1419 3411 35 0 0 chrX 109317486 109317882 -57332414 + MTA_Mm LTR MaLR 1 396 0 4 1419 1172 256 109 27 chrX 109317882 109317955 -57332341 - MTD LTR MaLR -325 94 21 4 1419 243 148 11 90 chrX 109317956 109318045 -57332251 + A-rich Low_complexity Low_complexity 3 84 0 4 1419 2251 98 95 3 chrX 109318132 109318489 -57331807 - Lx LINE L1 -7 6647 6258 4 1419 247 175 0 0 chrX 109318506 109318546 -57331750 + B3A SINE B2 57 96 -102 4 1419 405 0 0 0 chrX 109318689 109318734 -57331562 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1419 599 289 129 31 chrX 109318809 109319328 -57330968 + L1M4c LINE L1 4075 4651 -1731 4 1419 506 233 78 0 chrX 109319332 109319435 -57330861 + RSINE1 SINE B4 7 117 -48 4 1419 23 54 0 0 chrX 109319442 109319479 -57330817 + AT_rich Low_complexity Low_complexity 1 37 0 4 1419 23 0 0 0 chrX 109319495 109319518 -57330778 + AT_rich Low_complexity Low_complexity 1 23 0 4 1419 725 259 45 5 chrX 109319538 109319736 -57330560 + ID_B1 SINE B4 2 207 -17 4 1419 338 321 84 80 chrX 109319739 109320243 -57330053 + L1M4 LINE L1 5041 5401 -745 4 1419 398 341 91 14 chrX 109320258 109320478 -57329818 + L1M4 LINE L1 5453 5689 -490 4 1419 1056 78 157 29 chrX 109320643 109320815 -57329481 - B2_Mm2 SINE B2 0 195 2 4 1419 7204 147 33 5 chrX 109320839 109322891 -57327405 - Lx3C LINE L1 0 7050 4875 4 1419 189 380 23 23 chrX 109323140 109323272 -57327024 - L2 LINE L2 -541 2878 2747 4 1419 330 274 0 0 chrX 109323295 109323357 -57326939 + B1F SINE Alu 1 62 -87 4 1419 221 340 16 124 chrX 109323377 109323498 -57326798 + PB1D10 SINE Alu 1 108 -9 4 1419 23 68 0 0 chrX 109324112 109324156 -57326140 + AT_rich Low_complexity Low_complexity 1 44 0 4 1419 8170 133 51 19 chrX 109324499 109325947 -57324349 - Lx3B LINE L1 0 7058 5625 4 1419 455 341 40 36 chrX 109325964 109326186 -57324110 - LTR40a LTR ERVL -44 475 253 4 1419 22 0 0 0 chrX 109326439 109326461 -57323835 + AT_rich Low_complexity Low_complexity 1 22 0 4 1419 1020 66 73 0 chrX 109326681 109326818 -57323478 + B1_Mus2 SINE Alu 1 147 0 4 1419 31 58 0 0 chrX 109326818 109326870 -57323426 + AT_rich Low_complexity Low_complexity 1 52 0 4 1419 27419 59 3 1 chrX 109326912 109331163 -57319133 - L1Md_F2 LINE L1 0 6582 2319 4 1419 47 67 0 0 chrX 109331330 109331419 -57318877 + AT_rich Low_complexity Low_complexity 1 89 0 4 1419 983 304 102 13 chrX 109331644 109331957 -57318339 - ORR1E LTR MaLR -17 342 2 4 1419 4473 291 80 51 chrX 109331957 109332901 -57317395 - ORR1E-int LTR MaLR -52 1528 591 4 1419 603 203 36 36 chrX 109332901 109333039 -57317257 - B1_Mur1 SINE Alu -11 138 1 4 1419 4285 288 83 53 chrX 109333039 109333574 -57316722 - ORR1E-int LTR MaLR -990 590 6 4 1419 923 331 82 9 chrX 109333583 109333912 -57316384 - ORR1E LTR MaLR -6 353 1 4 1419 654 201 7 44 chrX 109334780 109334915 -57315381 + B1_Mur4 SINE Alu 21 150 0 4 1419 252 143 0 0 chrX 109335183 109335225 -57315071 + (TTA)n Simple_repeat Simple_repeat 3 44 0 4 1419 549 180 139 0 chrX 109335494 109335616 -57314680 + B1_Mus1 SINE Alu 2 140 -8 4 1419 32 86 0 0 chrX 109336296 109336377 -57313919 + AT_rich Low_complexity Low_complexity 1 81 0 4 1419 25 65 0 0 chrX 109337346 109337392 -57312904 + AT_rich Low_complexity Low_complexity 1 46 0 4 1419 798 100 0 8 chrX 109337457 109337588 -57312708 - Lx LINE L1 0 6654 6525 4 1419 450 0 0 0 chrX 109337613 109337663 -57312633 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1419 872 279 79 88 chrX 109337676 109338108 -57312188 - MT2A LTR ERVL -74 459 32 4 1419 318 361 147 9 chrX 109338334 109338653 -57311643 + L1MDa LINE L1 1583 1945 -4688 4 1419 413 303 98 34 chrX 109338867 109339103 -57311193 + L1M2 LINE L1 2129 2379 -3764 4 1419 36207 33 6 9 chrX 109339185 109344311 -57305985 + L1Md_A LINE L1 469 5586 -297 4 1419 8325 36 1 0 chrX 109344311 109345305 -57304991 + L1Md_T LINE L1 5587 6581 -1 4 1419 6334 54 8 0 chrX 109345295 109346088 -57304208 + L1Md_T LINE L1 5781 6579 -3 4 1419 36207 29 2 2 chrX 109346088 109346115 -57304181 + L1Md_A LINE L1 5587 5604 -279 4 1419 266 285 24 8 chrX 109346151 109346275 -57304021 + L1_Rod LINE L1 2575 2700 -3147 4 1419 21 0 0 0 chrX 109346534 109346555 -57303741 + AT_rich Low_complexity Low_complexity 1 21 0 4 1419 2199 164 50 0 chrX 109346555 109346939 -57303357 - Lx2B LINE L1 -1 6999 6597 4 1419 1844 290 76 46 chrX 109347199 109347810 -57302486 - Lx7 LINE L1 0 7696 7070 4 1419 652 42 21 0 chrX 109347810 109347906 -57302390 + (TA)n Simple_repeat Simple_repeat 1 98 0 4 1419 1844 290 76 46 chrX 109347906 109347953 -57302343 - Lx7 LINE L1 -627 7069 7017 4 1419 3711 164 22 77 chrX 109347953 109348330 -57301966 - RMER6D LTR ERVK -4 716 363 4 1419 207 0 0 0 chrX 109348330 109348353 -57301943 + (TCTCTG)n Simple_repeat Simple_repeat 6 28 0 4 1419 3711 164 22 77 chrX 109348353 109348732 -57301564 - RMER6D LTR ERVK -358 362 1 4 1419 1844 290 76 46 chrX 109348732 109348878 -57301418 - Lx7 LINE L1 -680 7016 6868 4 1419 477 110 0 0 chrX 109348905 109348978 -57301318 + (TA)n Simple_repeat Simple_repeat 2 74 0 4 1419 317 238 121 30 chrX 109348978 109349177 -57301119 + L1MDa LINE L1 3139 3355 -3182 4 1419 2626 296 63 20 chrX 109349188 109350862 -57299434 + L1M2 LINE L1 3015 5219 -924 4 1419 283 43 0 0 chrX 109351004 109351050 -57299246 - Lx LINE L1 -6 6648 6603 4 1419 207 139 0 0 chrX 109351325 109351361 -57298935 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1419 582 324 34 58 chrX 109351377 109351705 -57298591 - L1M4 LINE L1 -6170 372 53 4 1419 5381 115 19 48 chrX 109351739 109352653 -57297643 - RMER17D LTR ERVK -2 887 1 4 1419 862 207 138 9 chrX 109352653 109352863 -57297433 - ORR1D1 LTR MaLR -67 307 71 4 1419 634 293 18 12 chrX 109352923 109353089 -57297207 + B3 SINE B2 3 169 -47 4 1419 387 0 0 0 chrX 109353093 109353136 -57297160 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1419 21 0 0 0 chrX 109353318 109353339 -57296957 + AT_rich Low_complexity Low_complexity 1 21 0 4 1419 333 269 84 28 chrX 109353362 109353469 -57296827 - MER74A LTR ERVL -45 513 401 4 1419 297 345 23 0 chrX 109353504 109353591 -57296705 - MER74A LTR ERVL -269 289 201 4 1419 228 250 109 0 chrX 109356012 109356076 -57294220 - LTR85b LTR Gypsy? 0 784 714 4 1419 426 329 126 119 chrX 109356107 109356393 -57293903 + B4 SINE B4 1 288 -4 4 1419 236 259 0 0 chrX 109356400 109356454 -57293842 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1419 216 0 0 0 chrX 109356472 109356496 -57293800 + (TTAA)n Simple_repeat Simple_repeat 2 25 0 4 1419 194 0 0 37 chrX 109358597 109358624 -57291672 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 4 1419 22 56 0 0 chrX 109360640 109360676 -57289620 + AT_rich Low_complexity Low_complexity 1 36 0 5 1419 510 239 52 0 chrX 109363051 109363185 -57287111 + B1_Mur1 SINE Alu 1 141 -8 5 1419 3815 45 4 4 chrX 109363856 109364328 -57285968 - L1Md_F2 LINE L1 0 6582 6111 5 1419 2302 172 30 0 chrX 109364550 109364957 -57285339 - MTC LTR MaLR 0 421 3 5 1419 5196 180 116 4 chrX 109364960 109366026 -57284270 - MERVL_2A-int LTR ERVL -2303 3458 2204 5 1419 402 39 0 0 chrX 109366026 109366078 -57284218 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1419 333 100 0 0 chrX 109366085 109366135 -57284161 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 1419 5128 182 3 39 chrX 109366135 109366473 -57283823 - MERVL_2A-int LTR ERVL -3534 2227 1895 5 1419 631 235 202 15 chrX 109366473 109366745 -57283551 - RMER21B LTR ERV1 -435 407 85 5 1419 944 194 101 10 chrX 109366752 109366950 -57283346 + RLTR18B LTR ERVK 294 509 -3 5 1419 333 270 53 18 chrX 109367129 109367242 -57283054 - L1_Rod LINE L1 -6523 649 533 5 1419 3332 131 105 13 chrX 109367442 109368282 -57282014 + Lx3A LINE L1 5952 6976 -5 5 1419 21 57 0 0 chrX 109368283 109368318 -57281978 + AT_rich Low_complexity Low_complexity 1 35 0 5 1419 252 0 0 0 chrX 109369060 109369088 -57281208 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1419 311 112 104 0 chrX 109370314 109370439 -57279857 + (TATAG)n Simple_repeat Simple_repeat 2 139 0 5 1419 1197 134 39 50 chrX 109370444 109370700 -57279596 + RLTR28B LTR ERVL 1 288 -193 5 1419 730 183 24 18 chrX 109370700 109370867 -57279429 + Lx3A LINE L1 6806 6973 -8 5 1419 315 0 0 0 chrX 109370868 109370903 -57279393 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 5 1419 1197 182 93 16 chrX 109370903 109371073 -57279223 + RLTR28B LTR ERVL 289 478 -3 5 1419 359 162 0 42 chrX 109371234 109371305 -57278991 - MTE2a LTR MaLR -8 371 304 5 1419 2489 209 56 45 chrX 109371724 109372436 -57277860 + Lx4B LINE L1 5475 6218 -832 5 1419 186 43 0 0 chrX 109372436 109372459 -57277837 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 5 1419 2619 184 49 89 chrX 109372459 109373096 -57277200 + Lx4B LINE L1 6219 6869 -189 5 1419 3243 151 57 46 chrX 109373085 109373422 -57276874 + L1_Mur2 LINE L1 3898 4236 -1641 5 1419 5065 62 1 8 chrX 109373422 109374089 -57276207 + L1Md_F2 LINE L1 5919 6581 -1 5 1419 3243 151 57 46 chrX 109374089 109374249 -57276047 + L1_Mur2 LINE L1 4237 4424 -1453 5 1419 952 70 86 0 chrX 109374249 109374377 -57275919 + B1_Mus2 SINE Alu 3 141 -6 5 1419 3243 151 57 46 chrX 109374377 109374558 -57275738 + L1_Mur2 LINE L1 4425 4585 -1292 5 1419 2861 106 27 20 chrX 109374582 109375033 -57275263 - Lx3_Mus LINE L1 0 7009 6556 5 1419 6786 193 53 27 chrX 109375183 109375373 -57274923 + RodERV21-int LTR ERV1 1097 1304 -3687 5 1419 2010 205 65 88 chrX 109375373 109375988 -57274308 - MT2B LTR ERVL 0 601 1 5 1419 6786 193 53 27 chrX 109375988 109377184 -57273112 + RodERV21-int LTR ERV1 1305 2517 -2474 5 1419 3965 142 57 15 chrX 109377184 109377868 -57272428 - RLTR19B LTR ERVK 0 715 3 5 1419 2215 132 9 3 chrX 109377881 109378216 -57272080 - RLTR19-int LTR ERVK -8 6129 5793 5 1419 5001 49 5 5 chrX 109378216 109378856 -57271440 - L1Md_F3 LINE L1 -1 6583 5944 5 1419 37724 38 4 1 chrX 109378856 109381227 -57269069 - L1Md_T LINE L1 -12 6570 4204 5 1419 267 31 0 0 chrX 109381227 109381259 -57269037 + (CATAT)n Simple_repeat Simple_repeat 2 33 0 5 1419 37724 68 8 10 chrX 109381259 109385257 -57265039 - L1Md_T LINE L1 -1680 4203 208 5 1419 7562 33 0 2 chrX 109385271 109386176 -57264120 - L1Md_F3 LINE L1 -12 6572 5670 5 1419 15707 151 73 24 chrX 109386179 109390114 -57260182 - RLTR19-int LTR ERVK -361 5776 1674 5 1419 4799 108 21 19 chrX 109390114 109390842 -57259454 + Lx LINE L1 5924 6652 -2 5 1419 9988 149 47 32 chrX 109390842 109391828 -57258468 - RLTR19-int LTR ERVK -4464 1673 650 5 1419 5251 116 6 1 chrX 109391831 109392611 -57257685 - Lx LINE L1 -3 6651 5868 5 1419 7306 70 5 11 chrX 109392624 109394181 -57256115 + L1_Mus2 LINE L1 5011 6564 -2 5 1419 1783 158 132 11 chrX 109394191 109394760 -57255536 - RLTR19-int LTR ERVK -5499 638 1 5 1419 3660 162 43 55 chrX 109394760 109394944 -57255352 - RLTR19B LTR ERVK 0 715 534 5 1419 810 50 210 0 chrX 109394944 109395063 -57255233 + B1_Mus2 SINE Alu 2 145 -2 5 1419 210 37 0 0 chrX 109395069 109395096 -57255200 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1419 3660 162 43 55 chrX 109395096 109395625 -57254671 - RLTR19B LTR ERVK -182 533 4 5 1419 600 180 69 69 chrX 109395628 109395831 -57254465 + RodERV21-int LTR ERV1 2514 2716 -2275 5 1419 7728 39 2 0 chrX 109396892 109398098 -57252198 - L1Md_F2 LINE L1 -2 6580 5372 5 1419 2584 45 0 15 chrX 109398097 109398439 -57251857 + L1_Mm LINE L1 4652 4988 -895 5 1419 2344 14 0 0 chrX 109398437 109398715 -57251581 + L1Md_T LINE L1 5309 5586 -297 5 1419 8002 56 0 0 chrX 109398715 109399710 -57250586 + L1Md_T LINE L1 5587 6581 -1 5 1419 303 51 0 0 chrX 109399710 109399749 -57250547 + L1_Mm LINE L1 5294 5332 -551 5 1419 321 305 0 9 chrX 109400709 109400815 -57249481 + RodERV21-int LTR ERV1 3359 3463 -1528 5 1419 5177 190 36 13 chrX 109400830 109401865 -57248431 + RodERV21-int LTR ERV1 3766 4824 -167 5 1419 448 274 9 28 chrX 109401867 109401976 -57248320 + RMER4B LTR ERVK 345 451 -134 5 1419 431 229 130 11 chrX 109402036 109402213 -57248083 + RMER21B LTR ERV1 298 495 -347 5 1419 1554 216 46 14 chrX 109402463 109402811 -57247485 + MT2A LTR ERVL 41 399 -134 5 1419 1571 213 22 12 chrX 109402829 109403152 -57247144 - MTD LTR MaLR -5 414 89 5 1419 210 71 0 0 chrX 109403178 109403206 -57247090 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 5 1419 293 194 323 0 chrX 109403216 109403267 -57247029 + MT2A LTR ERVL 409 459 -74 5 1419 444 19 0 0 chrX 109403267 109403320 -57246976 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1419 293 194 323 0 chrX 109403320 109403361 -57246935 + MT2A LTR ERVL 460 529 -4 5 1419 822 286 71 30 chrX 109403355 109403705 -57246591 - ORR1E-int LTR MaLR -993 377 1 5 1419 878 271 113 27 chrX 109403709 109404001 -57246295 - ORR1E LTR MaLR -2 357 41 5 1419 257 342 11 27 chrX 109404555 109404752 -57245544 - ERVL-int LTR ERVL -3034 2727 2471 5 1419 267 31 0 0 chrX 109405677 109405709 -57244587 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1419 357 82 0 0 chrX 109405709 109405758 -57244538 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 1419 705 213 57 0 chrX 109406262 109406403 -57243893 + B1F2 SINE Alu 1 149 0 5 1419 257 75 0 24 chrX 109406529 109406570 -57243726 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 5 1419 585 179 138 0 chrX 109406818 109406941 -57243355 - B1_Mur1 SINE Alu -9 140 1 5 1419 881 332 15 19 chrX 109406961 109407222 -57243074 + LTR40a LTR ERVL 258 517 -2 5 1419 459 0 0 0 chrX 109408418 109408469 -57241827 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1419 1027 137 0 57 chrX 109408994 109409187 -57241109 + URR1B DNA MER1_type 44 225 0 5 1419 1060 171 25 20 chrX 109409703 109409900 -57240396 + URR1A DNA MER1_type 1 198 -28 5 1419 3606 143 33 17 chrX 109409901 109410533 -57239763 + RLTR26 LTR ERVK 1 642 0 5 1419 539 338 14 0 chrX 109411350 109411489 -57238807 + RSINE1 SINE B4 3 143 -22 5 1419 390 42 0 0 chrX 109411496 109411544 -57238752 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1419 351 0 0 0 chrX 109411872 109411911 -57238385 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1419 3921 50 8 2 chrX 109412091 109412576 -57237720 - L1_Mus2 LINE L1 0 6566 6079 5 1419 4304 63 0 1 chrX 109412576 109413376 -57236920 + L1_Mus2 LINE L1 5269 6067 -499 5 1419 23 0 0 0 chrX 109413512 109413535 -57236761 + AT_rich Low_complexity Low_complexity 1 23 0 5 1419 339 151 0 0 chrX 109413551 109413604 -57236692 - B2_Mm2 SINE B2 -94 101 49 5 1419 801 121 0 0 chrX 109413642 109413758 -57236538 - B2_Mm1t SINE B2 -23 170 55 5 1419 4449 98 52 3 chrX 109413758 109414414 -57235882 + Lx3B LINE L1 6286 6973 0 5 1419 459 0 0 0 chrX 109414422 109414473 -57235823 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 5 1419 388 362 0 24 chrX 109414495 109414659 -57235637 + RSINE1 SINE B4 3 162 -3 5 1419 260 275 117 23 chrX 109414880 109415051 -57235245 + L1MA6 LINE L1 6063 6249 -51 5 1419 596 233 33 0 chrX 109415106 109415226 -57235070 - B1_Mur1 SINE Alu -21 128 5 5 1419 1627 165 88 17 chrX 109415251 109415603 -57234693 + ORR1C1 LTR MaLR 2 378 0 5 1419 227 265 0 20 chrX 109415653 109415703 -57234593 + ID4_ SINE ID 17 65 -18 5 1419 33 0 0 0 chrX 109415719 109415752 -57234544 + AT_rich Low_complexity Low_complexity 1 33 0 5 1419 21 36 0 0 chrX 109416392 109416420 -57233876 + AT_rich Low_complexity Low_complexity 1 28 0 5 1419 23 0 0 0 chrX 109416431 109416454 -57233842 + AT_rich Low_complexity Low_complexity 1 23 0 5 1419 297 0 0 0 chrX 109416503 109416536 -57233760 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1419 876 331 55 32 chrX 109416624 109416970 -57233326 + MLT1J LTR MaLR 27 380 -132 5 1419 1129 314 61 24 chrX 109417167 109417680 -57232616 + MLT1F LTR MaLR 3 545 -3 5 1419 189 312 0 15 chrX 109417805 109417870 -57232426 + L2 LINE L2 847 910 -2509 5 1419 2723 257 31 45 chrX 109418107 109419116 -57231180 + L1_Mur3 LINE L1 281 1275 -6437 5 1419 2830 122 4 8 chrX 109419113 109419584 -57230712 + L1_Mur2 LINE L1 4356 4824 -1053 5 1419 16206 119 33 13 chrX 109419595 109422997 -57227299 - L1Md_F LINE L1 -2056 3827 411 5 1419 22 0 0 0 chrX 109423047 109423069 -57227227 + AT_rich Low_complexity Low_complexity 1 22 0 5 1419 31 82 0 0 chrX 109423430 109423503 -57226793 + AT_rich Low_complexity Low_complexity 1 73 0 5 1419 30 59 0 0 chrX 109423591 109423642 -57226654 + AT_rich Low_complexity Low_complexity 1 51 0 5 1419 227 340 11 0 chrX 109423839 109423933 -57226363 + L2 LINE L2 2759 2853 -566 5 1419 326 222 111 7 chrX 109423942 109424113 -57226183 - Lx7 LINE L1 -18 7678 7363 5 1419 342 0 0 0 chrX 109424346 109424384 -57225912 + (TC)n Simple_repeat Simple_repeat 2 39 0 5 1419 378 0 0 0 chrX 109424384 109424425 -57225871 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1419 252 59 0 0 chrX 109425334 109425368 -57224928 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1419 475 230 136 89 chrX 109426113 109426304 -57223992 + RMER30 DNA MER1_type 2 201 -1 5 1419 302 188 49 66 chrX 109428269 109428369 -57221927 + B1_Mus2 SINE Alu 8 94 -55 5 1419 776 282 99 29 chrX 109428492 109428904 -57221392 - Lx8 LINE L1 -129 7344 6904 5 1419 407 294 31 122 chrX 109428907 109429267 -57221029 - L1_Mm LINE L1 -297 5586 5260 5 1419 23 68 0 0 chrX 109432450 109432494 -57217802 + AT_rich Low_complexity Low_complexity 1 44 0 5 1419 228 319 14 14 chrX 109432765 109432838 -57217458 - Tigger10 DNA Tigger -45 1798 1726 5 1419 408 177 72 58 chrX 109432928 109433066 -57217230 + Lx5 LINE L1 6909 7048 -2 5 1419 382 339 0 0 chrX 109434074 109434189 -57216107 - PB1D10 SINE Alu 0 117 3 5 1419 386 320 27 20 chrX 109435032 109435182 -57215114 - RMER15-int LTR ERVL -2775 2224 2074 5 1419 7735 70 11 1 chrX 109435525 109436899 -57213397 - L1_Mus3 LINE L1 -6 6632 5241 5 1419 3598 117 15 2 chrX 109436898 109437488 -57212808 + L1_Mus3 LINE L1 4659 5256 -627 5 1419 1500 43 43 0 chrX 109437857 109438041 -57212255 - B2_Mm1t SINE B2 0 193 2 5 1419 396 306 5 100 chrX 109438438 109438638 -57211658 - B3A SINE B2 -16 182 2 6 1419 238 26 51 0 chrX 109439313 109439352 -57210944 + (TTTTTG)n Simple_repeat Simple_repeat 3 43 0 6 1419 486 49 0 0 chrX 109439462 109439523 -57210773 + (TA)n Simple_repeat Simple_repeat 1 61 0 6 1419 449 254 32 24 chrX 109440366 109440491 -57209805 + RSINE1 SINE B4 25 150 -15 6 1419 209 140 0 23 chrX 109440963 109441007 -57209289 + (TA)n Simple_repeat Simple_repeat 2 44 0 6 1419 489 306 16 27 chrX 109441114 109441302 -57208994 + MER3 DNA MER1_type 4 189 -20 6 1419 526 266 30 54 chrX 109441573 109441740 -57208556 + RSINE1 SINE B4 3 165 0 6 1419 863 238 54 10 chrX 109441842 109442046 -57208250 - B3 SINE B2 -2 214 2 6 1419 322 351 148 0 chrX 109442441 109442598 -57207698 - MIR3 SINE MIR -10 198 24 6 1419 245 94 0 0 chrX 109443177 109443209 -57207087 - U2 snRNA snRNA -153 35 4 6 1419 277 353 103 0 chrX 109443706 109443822 -57206474 - MIRb SINE MIR -123 145 18 6 1419 765 276 144 0 chrX 109444056 109444299 -57205997 - MER82 DNA MER2_type -374 279 2 6 1420 357 279 35 0 chrX 109445398 109445484 -57204812 - PB1D10 SINE Alu -17 100 12 6 1420 356 316 104 67 chrX 109445507 109445775 -57204521 - B4A SINE B4 -12 280 3 6 1420 27 73 0 0 chrX 109445868 109445923 -57204373 + AT_rich Low_complexity Low_complexity 1 55 0 6 1420 495 297 90 0 chrX 109446054 109446209 -57204087 - B3A SINE B2 -29 169 1 6 1420 327 306 207 0 chrX 109446551 109446672 -57203624 - RSINE1 SINE B4 -17 148 3 6 1420 331 320 40 73 chrX 109446727 109446992 -57203304 - B4A SINE B4 -2 290 48 6 1420 551 302 43 19 chrX 109447009 109447171 -57203125 - ID_B1 SINE B4 -39 185 20 6 1420 4132 34 0 0 chrX 109448771 109449246 -57201050 - MT2C_Mm LTR ERVL 0 475 1 6 1420 834 202 131 5 chrX 109449377 109449576 -57200720 - MTD LTR MaLR 0 419 196 6 1420 330 87 0 0 chrX 109449576 109449622 -57200674 + (TCCC)n Simple_repeat Simple_repeat 2 47 0 6 1420 2189 231 133 30 chrX 109449622 109450230 -57200066 - Lx6 LINE L1 -29 7431 6761 6 1420 738 243 83 16 chrX 109450394 109450590 -57199706 - MTD LTR MaLR -172 224 33 6 1420 721 147 14 60 chrX 109450580 109450739 -57199557 - ORR1A3 LTR MaLR -189 138 3 6 1420 3567 81 96 6 chrX 109450741 109451262 -57199034 - ORR1A3-int LTR MaLR 0 1963 1396 6 1420 204 40 0 0 chrX 109451366 109451391 -57198905 + (TTG)n Simple_repeat Simple_repeat 2 26 0 6 1420 1215 309 25 21 chrX 109452015 109452500 -57197796 - MuRRS4-int LTR ERV1 -1107 3956 3470 6 1420 469 323 65 24 chrX 109452764 109453056 -57197240 - MURVY-int LTR ERV1 -3220 4558 4120 6 1420 539 289 22 18 chrX 109453298 109453520 -57196776 - MURVY-int LTR ERV1 -3793 3659 3437 6 1420 255 307 45 45 chrX 109453535 109453668 -57196628 - MURVY-int LTR ERV1 -4196 3360 3228 6 1420 195 42 0 0 chrX 109453685 109453709 -57196587 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1420 424 286 16 27 chrX 109454486 109454669 -57195627 - RLTR6-int LTR ERV1 -6309 1469 1289 6 1420 775 100 0 0 chrX 109455337 109455437 -57194859 - B2_Mm2 SINE B2 -95 100 1 6 1420 214 311 0 0 chrX 109455822 109455883 -57194413 + PB1D10 SINE Alu 40 100 -17 6 1420 503 273 9 0 chrX 109456097 109456207 -57194089 - B3 SINE B2 -105 111 1 6 1420 198 71 0 0 chrX 109456224 109456252 -57194044 + (CACCAT)n Simple_repeat Simple_repeat 1 28 0 6 1420 284 253 0 0 chrX 109456526 109456609 -57193687 - L1MA8 LINE L1 -50 6241 6159 6 1420 195 125 0 0 chrX 109456811 109456851 -57193445 + (TTTTTG)n Simple_repeat Simple_repeat 1 40 0 6 1420 1126 82 0 0 chrX 109456851 109456997 -57193299 - B1_Mus1 SINE Alu -2 146 1 6 1420 24 67 0 0 chrX 109457000 109457045 -57193251 + AT_rich Low_complexity Low_complexity 1 45 0 6 1420 24 0 0 0 chrX 109457146 109457170 -57193126 + AT_rich Low_complexity Low_complexity 1 24 0 6 1420 1161 61 0 26 chrX 109457170 109457321 -57192975 - B1_Mus1 SINE Alu 0 148 2 6 1420 1048 185 54 20 chrX 109457345 109457549 -57192747 - B3 SINE B2 -5 211 1 6 1420 324 48 0 0 chrX 109457562 109457604 -57192692 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 6 1420 536 239 47 47 chrX 109457643 109457872 -57192424 + Lx4B LINE L1 6740 7058 0 6 1420 3463 102 66 6 chrX 109457879 109458423 -57191873 + Lx3_Mus LINE L1 6433 7009 0 6 1420 318 344 8 8 chrX 109458479 109458605 -57191691 - L1ME3B LINE L1 -304 5936 5811 6 1420 702 284 0 33 chrX 109458605 109458758 -57191538 - B1_Mur1 SINE Alu 0 149 2 6 1420 241 300 0 0 chrX 109458793 109458883 -57191413 - L1ME3B LINE L1 -356 5806 5717 6 1420 2318 157 45 17 chrX 109458931 109459333 -57190963 + MTC LTR MaLR 1 413 -8 6 1420 405 284 72 86 chrX 109459336 109459475 -57190821 + RSINE1 SINE B4 29 165 0 6 1420 1516 259 26 37 chrX 109460053 109460510 -57189786 - Lx6 LINE L1 -26 7434 6983 6 1420 681 329 123 0 chrX 109460613 109460841 -57189455 - MLT1H1 LTR MaLR -24 531 276 6 1420 373 348 40 50 chrX 109461034 109461179 -57189117 - Lx9 LINE L1 -3 7470 7328 6 1420 315 65 0 0 chrX 109461179 109461225 -57189071 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1420 530 337 8 16 chrX 109461225 109461486 -57188810 - Lx9 LINE L1 -192 7452 7099 6 1420 277 292 68 14 chrX 109461531 109461604 -57188692 + RSINE1 SINE B4 2 78 -87 6 1420 315 315 89 9 chrX 109463698 109463810 -57186486 - MIRc SINE MIR -117 151 31 6 1420 393 353 0 0 chrX 109465161 109465331 -57184965 + L1M5 LINE L1 5484 5653 -526 6 1420 2308 151 53 15 chrX 109465337 109465735 -57184561 + MTC LTR MaLR 1 413 -8 6 1420 250 341 15 23 chrX 109465750 109465882 -57184414 + L1M5 LINE L1 5679 5809 -370 6 1420 743 182 6 75 chrX 109466311 109466471 -57183825 + B1_Mur4 SINE Alu 1 149 -1 6 1420 6745 88 73 4 chrX 109468308 109469378 -57180918 - Lx3_Mus LINE L1 -2 7007 5864 6 1420 186 321 22 100 chrX 109469954 109470044 -57180252 - MIR3 SINE MIR -17 191 109 6 1420 477 279 47 66 chrX 109470195 109470452 -57179844 - HAL1b LINE L1 -36 1973 1722 6 1420 22 56 0 0 chrX 109470491 109470527 -57179769 + AT_rich Low_complexity Low_complexity 1 36 0 6 1420 1149 58 0 0 chrX 109470613 109470750 -57179546 + B1_Mus1 SINE Alu 2 138 -10 6 1420 678 58 0 0 chrX 109470768 109470855 -57179441 + (TAGA)n Simple_repeat Simple_repeat 4 90 0 6 1420 967 279 22 14 chrX 109471055 109471331 -57178965 - B4 SINE B4 -14 278 1 6 1420 244 254 72 56 chrX 109471414 109471539 -57178757 - Tigger13a DNA MER2_type -249 522 396 6 1420 238 216 0 0 chrX 109471717 109471768 -57178528 + L1M1 LINE L1 5859 5909 -391 6 1420 820 164 14 14 chrX 109471768 109471916 -57178380 + B1_Mur4 SINE Alu 2 149 -1 6 1420 241 189 0 42 chrX 109472007 109472079 -57178217 + (TATATG)n Simple_repeat Simple_repeat 3 71 0 6 1420 318 240 20 40 chrX 109472079 109472179 -57178117 + L1MCa LINE L1 1901 1998 -4510 6 1420 39 66 0 11 chrX 109472362 109472391 -57177905 + AT_rich Low_complexity Low_complexity 1 29 0 6 1420 606 271 102 32 chrX 109472391 109472578 -57177718 + B3 SINE B2 3 202 -14 6 1420 39 66 0 11 chrX 109472578 109472640 -57177656 + AT_rich Low_complexity Low_complexity 1 62 0 6 1420 488 253 93 36 chrX 109473119 109473344 -57176952 + L1MA7 LINE L1 5694 5931 -360 6 1420 6211 115 22 8 chrX 109473907 109474835 -57175461 + Lx4A LINE L1 6118 7058 0 6 1420 303 308 49 16 chrX 109474918 109475040 -57175256 + L1M LINE L1 5254 5379 -745 6 1420 277 321 25 13 chrX 109475121 109475200 -57175096 - ID SINE ID -139 85 6 6 1420 266 286 29 98 chrX 109475372 109475577 -57174719 + L1M LINE L1 5531 5721 -403 6 1420 225 212 99 12 chrX 109475656 109475737 -57174559 - Lx5 LINE L1 -3 7047 6960 6 1420 2394 161 67 29 chrX 109475792 109476271 -57174025 - Lx5 LINE L1 -76 6974 6478 6 1420 708 98 0 0 chrX 109476302 109476404 -57173892 + (TTTC)n Simple_repeat Simple_repeat 2 103 0 6 1420 414 323 51 65 chrX 109476943 109477376 -57172920 + L1MA9 LINE L1 5885 6311 -1 6 1420 557 223 27 54 chrX 109479191 109479338 -57170958 + B1F SINE Alu 5 147 -2 6 1420 500 195 60 75 chrX 109479730 109479863 -57170433 - MLT1A LTR MaLR -217 157 27 6 1420 209 366 84 12 chrX 109479936 109480102 -57170194 + MIR SINE MIR 12 189 -73 6 1420 498 143 0 0 chrX 109480123 109480228 -57170068 + (TC)n Simple_repeat Simple_repeat 2 106 0 6 1420 275 278 31 72 chrX 109480269 109480366 -57169930 - PB1D7 SINE Alu -14 106 14 6 1420 456 274 9 103 chrX 109480654 109480886 -57169410 + Lx8 LINE L1 7246 7455 -18 6 1420 250 281 0 0 chrX 109480892 109480949 -57169347 + Lx8 LINE L1 7253 7309 -164 6 1420 413 224 38 36 chrX 109480989 109481169 -57169127 + B3 SINE B2 2 215 -1 6 1420 303 93 0 0 chrX 109481418 109481461 -57168835 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1420 863 183 47 10 chrX 109481543 109481736 -57168560 - Lx3C LINE L1 -11 6965 6766 6 1420 1260 115 5 41 chrX 109481745 109481963 -57168333 + Lx3C LINE L1 6305 6514 -462 6 1420 23 0 0 0 chrX 109482360 109482383 -57167913 + AT_rich Low_complexity Low_complexity 1 23 0 6 1420 513 289 114 4 chrX 109482383 109482619 -57167677 - Charlie4a DNA MER1_type -230 278 17 6 1420 4540 56 12 7 chrX 109482710 109483299 -57166997 + L1Md_F2 LINE L1 5990 6581 -1 6 1420 305 316 60 73 chrX 109483783 109483933 -57166363 + MIRc SINE MIR 24 171 -97 6 1420 302 312 127 25 chrX 109484108 109484266 -57166030 + L2a LINE L2 1989 2162 -1257 6 1420 457 97 83 0 chrX 109484308 109484380 -57165916 - B3 SINE B2 -136 80 3 6 1420 344 296 20 20 chrX 109484771 109484871 -57165425 + MTC LTR MaLR 1 100 -321 6 1420 465 329 184 28 chrX 109484903 109485762 -57164534 + L2a LINE L2 2304 3368 -58 6 1420 312 27 0 0 chrX 109486210 109486247 -57164049 + (TATG)n Simple_repeat Simple_repeat 4 40 0 6 1420 720 206 83 87 chrX 109487079 109487132 -57163164 + Charlie12 DNA MER1_type 623 670 -2203 6 1420 411 320 64 25 chrX 109487132 109487289 -57163007 + RSINE1 SINE B4 1 163 -2 6 1420 720 206 83 87 chrX 109487289 109487512 -57162784 + Charlie12 DNA MER1_type 671 898 -1975 6 1420 234 342 8 33 chrX 109487533 109487654 -57162642 + Lx8 LINE L1 7176 7293 -180 6 1420 1164 69 0 0 chrX 109487690 109487850 -57162446 - L1_Mm LINE L1 -439 5444 5285 7 1420 18295 52 6 0 chrX 109487841 109490958 -57159338 - L1Md_F2 LINE L1 -4 6578 3446 7 1420 217 158 0 50 chrX 109490958 109491018 -57159278 + T-rich Low_complexity Low_complexity 1 57 0 7 1420 4345 75 2 2 chrX 109491018 109491619 -57158677 - Lx3_Mus LINE L1 0 7009 6409 7 1420 8407 15 0 0 chrX 109491624 109492807 -57157489 - L1Md_A LINE L1 0 6582 5400 7 1420 7988 61 0 17 chrX 109492801 109493936 -57156360 - L1Md_F2 LINE L1 -2432 3451 2336 7 1420 6345 66 11 0 chrX 109493934 109494792 -57155504 + L1_Mus1 LINE L1 5700 6566 -1 7 1420 1396 162 147 3 chrX 109494963 109495310 -57154986 + Lx9 LINE L1 7246 7642 -2 7 1420 612 198 41 51 chrX 109495363 109495560 -57154736 - Lx9 LINE L1 -10 7634 7440 7 1420 2000 258 121 67 chrX 109495577 109496417 -57153879 + Charlie12 DNA MER1_type 1690 2575 -298 6 1420 24 0 0 0 chrX 109496419 109496443 -57153853 + AT_rich Low_complexity Low_complexity 1 24 0 7 1420 3096 59 3 0 chrX 109496490 109496881 -57153415 - L1Md_T LINE L1 0 6582 6191 7 1420 328 91 15 15 chrX 109498001 109498068 -57152228 + (TTTTTG)n Simple_repeat Simple_repeat 3 69 0 7 1420 1044 272 29 29 chrX 109498601 109498874 -57151422 - B4 SINE B4 -6 286 14 7 1420 3120 29 17 73 chrX 109499268 109499681 -57150615 - RLTR10 LTR ERVK 0 390 1 7 1420 2676 22 0 0 chrX 109499683 109500000 -57150296 - RLTR10-int LTR ERVK -3 1984 1668 7 1420 5733 16 0 0 chrX 109500000 109500678 -57149618 - RLTR10-int LTR ERVK -320 1667 990 1 1420 324 271 31 8 chrX 109500760 109500890 -57149406 - RLTR10-int LTR ERVK -5987 1594 1462 2 1420 7667 47 7 12 chrX 109500954 109501972 -57148324 - RLTR10-int LTR ERVK -989 998 9 2 1420 2577 39 15 174 chrX 109501973 109502439 -57147857 - RLTR10 LTR ERVK -5 385 1 2 1420 376 266 0 13 chrX 109502472 109502561 -57147735 - B1_Mur3 SINE Alu -37 83 1 3 1420 21 57 0 0 chrX 109502617 109502652 -57147644 + AT_rich Low_complexity Low_complexity 1 35 0 4 1420 1181 85 44 17 chrX 109502655 109502835 -57147461 + B2_Mm2 SINE B2 2 186 -9 5 1420 254 310 0 0 chrX 109503701 109503788 -57146508 + L1M4c LINE L1 32 118 -6266 6 1420 339 89 0 0 chrX 109504101 109504157 -57146139 + (TCTCTG)n Simple_repeat Simple_repeat 4 59 0 7 1420 3350 50 7 0 chrX 109504168 109504586 -57145710 + BGLII LTR ERVK 1 421 0 8 1420 219 139 0 0 chrX 109504586 109504622 -57145674 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 9 1420 331 312 9 26 chrX 109504741 109504856 -57145440 - RMER10B LTR ERVL -23 375 263 1 1420 4528 67 5 5 chrX 109504907 109505495 -57144801 + L1Md_F2 LINE L1 5994 6581 -1 1 1420 1105 150 0 20 chrX 109505848 109506045 -57144251 - L1_Mm LINE L1 -1012 4871 4679 1 1420 4013 144 17 22 chrX 109506045 109506735 -57143561 + Lx2B LINE L1 6309 6995 -5 1 1420 429 283 123 9 chrX 109506859 109506973 -57143323 - RSINE1 SINE B4 -37 128 2 1 1420 210 91 0 0 chrX 109506981 109507014 -57143282 + (GA)n Simple_repeat Simple_repeat 1 33 0 1 1420 552 149 0 0 chrX 109507165 109507259 -57143037 + (TA)n Simple_repeat Simple_repeat 2 95 0 1 1420 207 0 0 0 chrX 109507259 109507282 -57143014 + (GA)n Simple_repeat Simple_repeat 2 24 0 1 1420 618 286 112 9 chrX 109507284 109507473 -57142823 + L1M4c LINE L1 2678 2876 -3506 6 1420 1253 196 119 38 chrX 109507473 109507817 -57142479 - ORR1D1 LTR MaLR 0 374 3 1 1420 618 281 115 8 chrX 109507817 109508060 -57142236 + L1M4c LINE L1 2877 3148 -3228 6 1420 334 267 78 22 chrX 109508233 109508600 -57141696 + L1M4c LINE L1 3133 3528 -2848 6 1420 381 258 88 29 chrX 109508694 109508830 -57141466 + Tigger7 DNA MER2_type 2340 2483 -8 1 1420 370 324 61 0 chrX 109508835 109508983 -57141313 + L1M4c LINE L1 4683 4839 -1543 6 1420 1643 172 113 9 chrX 109508988 109509171 -57141125 - ORR1C2 LTR MaLR -1 383 173 2 1420 662 0 13 0 chrX 109509171 109509249 -57141047 + (GA)n Simple_repeat Simple_repeat 2 80 0 2 1420 1643 172 113 9 chrX 109509249 109509410 -57140886 - ORR1C2 LTR MaLR -212 172 4 2 1420 3715 213 67 64 chrX 109509412 109510031 -57140265 - ORR1C2-int LTR MaLR 0 1370 758 2 1420 989 131 14 0 chrX 109510031 109510176 -57140120 - B1_Mur2 SINE Alu 0 149 3 2 1420 3715 213 67 64 chrX 109510176 109510521 -57139775 - ORR1C2-int LTR MaLR -613 757 403 2 1420 3151 166 119 73 chrX 109510521 109511378 -57138918 + RMER17B LTR ERVK 1 878 -80 2 1420 1281 245 50 33 chrX 109511372 109511674 -57138622 - ORR1C2-int LTR MaLR -1088 421 113 2 1420 1342 141 272 3 chrX 109511674 109511838 -57138458 - ORR1C1 LTR MaLR 0 378 167 2 1420 306 0 0 0 chrX 109511838 109511872 -57138424 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1420 1342 141 272 3 chrX 109511872 109512005 -57138291 - ORR1C1 LTR MaLR -212 166 2 2 1420 1281 245 50 33 chrX 109512005 109512065 -57138231 - ORR1C2-int LTR MaLR -1397 112 54 2 1420 402 371 34 0 chrX 109512070 109512248 -57138048 + L1M4c LINE L1 4933 5116 -1266 6 1420 23 33 0 0 chrX 109512488 109512518 -57137778 + AT_rich Low_complexity Low_complexity 1 30 0 2 1420 1157 89 0 0 chrX 109512524 109512670 -57137626 + B1_Mus2 SINE Alu 2 147 0 2 1420 1888 161 51 13 chrX 109513338 109513710 -57136586 + L1VL2 LINE L1 284 669 -5666 2 1420 10075 28 0 2 chrX 109513707 109514957 -57135339 + L1Md_F2 LINE L1 4338 5585 -298 2 1420 8143 45 2 1 chrX 109514958 109515953 -57134343 + L1Md_F2 LINE L1 5587 6582 0 2 1420 1109 148 113 5 chrX 109515956 109516160 -57134136 + MTC LTR MaLR 196 421 0 3 1420 754 224 0 0 chrX 109516665 109516799 -57133497 + B1_Mur3 SINE Alu 3 136 -13 3 1420 225 0 0 0 chrX 109516800 109516825 -57133471 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 1420 492 86 0 0 chrX 109517182 109517252 -57133044 + (TA)n Simple_repeat Simple_repeat 1 70 0 3 1420 254 279 76 9 chrX 109517832 109517937 -57132359 - L5 LINE RTE -1065 1200 1089 3 1420 1993 52 0 4 chrX 109517995 109518246 -57132050 + L1Md_T LINE L1 6333 6582 0 3 1420 23 33 0 0 chrX 109518340 109518370 -57131926 + AT_rich Low_complexity Low_complexity 1 30 0 3 1420 200 139 0 27 chrX 109518464 109518501 -57131795 + (TTA)n Simple_repeat Simple_repeat 2 37 0 3 1420 303 290 83 36 chrX 109520868 109521036 -57129260 + Lx7 LINE L1 654 829 -6899 3 1420 3186 213 41 38 chrX 109521374 109522148 -57128148 + Lx7 LINE L1 843 1616 -4264 3 1420 6769 77 1 3 chrX 109522148 109523050 -57127246 + L1Md_F2 LINE L1 5683 6582 0 3 1420 3186 189 54 15 chrX 109523050 109523544 -57126752 + Lx7 LINE L1 1617 2128 -3752 3 1420 630 243 111 18 chrX 109523557 109523783 -57126513 - Lx2B LINE L1 -2 6974 6728 4 1420 6815 207 92 97 chrX 109523778 109525217 -57125079 - Lx2B LINE L1 -644 6356 4863 4 1420 478 228 36 42 chrX 109525217 109525382 -57124914 - RLTR43A LTR ERVK 0 364 201 4 1420 6815 207 92 97 chrX 109525382 109527544 -57122752 - Lx2B LINE L1 -644 4862 2615 4 1420 1680 166 160 11 chrX 109527541 109528143 -57122153 - Lx2B LINE L1 -2449 1465 804 4 1420 907 242 63 145 chrX 109529160 109529623 -57120673 - RLTR23 LTR ERV1 0 430 6 4 1420 4093 226 99 16 chrX 109529645 109530943 -57119353 + Lx7 LINE L1 3288 4692 -1185 3 1420 2675 154 67 18 chrX 109530947 109531496 -57118800 - RMER6C LTR ERVK -4 686 111 4 1420 2615 148 40 8 chrX 109531528 109532024 -57118272 + Lx7 LINE L1 4689 5200 -680 3 1420 1441 79 0 5 chrX 109532362 109532552 -57117744 - B2_Mm2 SINE B2 -5 190 2 4 1420 428 185 0 0 chrX 109532552 109532633 -57117663 + Lx7 LINE L1 6119 6199 -1497 3 1420 428 210 33 53 chrX 109532635 109532786 -57117510 + Lx4B LINE L1 6911 7058 0 4 1420 219 69 0 0 chrX 109532786 109532815 -57117481 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 4 1420 215 114 0 22 chrX 109532825 109532870 -57117426 + (GAAA)n Simple_repeat Simple_repeat 3 46 0 4 1420 1076 239 69 29 chrX 109533116 109533392 -57116904 - ORR1C2 LTR MaLR 0 384 98 4 1420 1866 167 89 48 chrX 109533394 109533824 -57116472 - ORR1B1 LTR MaLR 0 394 1 4 1420 211 370 150 14 chrX 109534251 109534391 -57115905 - MIRb SINE MIR -43 225 67 5 1420 1032 86 0 28 chrX 109534425 109534569 -57115727 - B1_Mm SINE Alu 0 147 8 5 1420 537 235 64 105 chrX 109534432 109534603 -57115693 - B4 SINE B4 -69 223 60 5 1420 241 315 33 13 chrX 109534785 109534919 -57115377 - MIR SINE MIR -54 214 71 5 1420 5579 41 21 0 chrX 109535351 109536029 -57114267 + L1Md_F2 LINE L1 5879 6570 -12 5 1420 403 0 0 0 chrX 109536073 109536121 -57114175 - L1_Mm LINE L1 -526 5357 5310 5 1420 3509 83 2 0 chrX 109536121 109536590 -57113706 + L1Md_T LINE L1 6113 6582 0 5 1420 22 0 0 0 chrX 109537024 109537046 -57113250 + AT_rich Low_complexity Low_complexity 1 22 0 5 1420 803 251 35 5 chrX 109537053 109537253 -57113043 - B3 SINE B2 -7 209 4 5 1420 264 304 111 100 chrX 109537265 109537499 -57112797 - Lx8 LINE L1 0 7473 7232 5 1420 402 21 0 0 chrX 109537499 109537546 -57112750 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1420 264 304 111 100 chrX 109537546 109537600 -57112696 - Lx8 LINE L1 -242 7231 7182 5 1420 1235 306 49 113 chrX 109538079 109539202 -57111094 - L1_Mur3 LINE L1 -908 5235 4151 6 1420 6119 88 0 31 chrX 109539195 109540110 -57110186 + L1VL1 LINE L1 193 1079 -5343 6 1420 1680 35 0 0 chrX 109540103 109540306 -57109990 + L1Md_F2 LINE L1 5985 6187 -395 6 1420 2729 87 55 59 chrX 109540306 109540783 -57109513 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1420 935 148 27 21 chrX 109540784 109540970 -57109326 + IAPEz-int LTR ERVK 9 195 -6286 6 1420 237 321 0 0 chrX 109540970 109541023 -57109273 + RLTR27 LTR ERVK 223 275 -34 6 1420 3281 68 7 16 chrX 109541023 109541599 -57108697 + IAPEz-int LTR ERVK 168 662 -5819 6 1420 2121 61 0 0 chrX 109541599 109541877 -57108419 + IAPEz-int LTR ERVK 1359 1636 -4845 6 1420 5843 38 3 19 chrX 109541876 109542632 -57107664 + IAPEz-int LTR ERVK 5736 6479 -2 6 1420 1743 62 13 0 chrX 109542634 109542861 -57107435 + IAPLTR2_Mm LTR ERVK 1 230 -97 6 1420 37836 30 1 6 chrX 109542861 109549009 -57101287 - L1Md_T LINE L1 -6 6576 465 6 1420 1012 84 252 5 chrX 109549010 109549224 -57101072 + IAPLTR2_Mm LTR ERVK 209 475 0 6 1420 3144 42 0 5 chrX 109549224 109549607 -57100689 + L1Md_F2 LINE L1 6202 6582 0 6 1420 830 199 11 21 chrX 109549729 109549919 -57100377 - Lx6 LINE L1 -1457 6003 5816 6 1420 1322 204 0 18 chrX 109549973 109550257 -57100039 + L1_Mur3 LINE L1 5522 5800 -80 7 1420 4684 47 0 3 chrX 109550284 109550856 -57099440 - L1Md_F2 LINE L1 -13 6569 6000 7 1420 23 54 0 0 chrX 109551175 109551212 -57099084 + AT_rich Low_complexity Low_complexity 1 37 0 7 1420 210 164 0 0 chrX 109551998 109552053 -57098243 + CT-rich Low_complexity Low_complexity 2 56 0 7 1420 303 205 36 0 chrX 109552087 109552170 -57098126 + T-rich Low_complexity Low_complexity 3 88 0 7 1420 705 255 122 45 chrX 109552558 109552862 -57097434 - Lx9 LINE L1 -996 6648 6177 7 1420 21 36 0 0 chrX 109552884 109552912 -57097384 + AT_rich Low_complexity Low_complexity 1 28 0 7 1420 455 254 15 15 chrX 109553016 109553148 -57097148 - Lx9 LINE L1 -1676 5968 5837 7 1420 21 0 0 0 chrX 109553279 109553300 -57096996 + AT_rich Low_complexity Low_complexity 1 21 0 7 1420 354 317 49 0 chrX 109553365 109553507 -57096789 + Lx9 LINE L1 7258 7406 -238 7 1420 2763 198 66 10 chrX 109553546 109554148 -57096148 + Lx6 LINE L1 6444 7079 -381 7 1420 225 0 0 0 chrX 109554183 109554208 -57096088 + (TA)n Simple_repeat Simple_repeat 1 25 0 8 1420 988 333 62 6 chrX 109554231 109554712 -57095584 - Lx8 LINE L1 0 7473 6966 8 1420 1418 236 56 28 chrX 109554721 109555223 -57095073 + L1_Mur3 LINE L1 3662 4177 -1703 8 1420 6942 93 20 1 chrX 109555218 109556375 -57093921 - L1_Mus3 LINE L1 -1 6637 5447 8 1420 265 30 0 0 chrX 109556391 109556424 -57093872 - MTC LTR MaLR -54 367 335 8 1420 9805 27 0 0 chrX 109556424 109558302 -57091994 - L1Md_T LINE L1 -1 6581 4704 8 1420 2020 139 8 0 chrX 109558300 109558660 -57091636 - L1_Mus3 LINE L1 -421 5462 5100 8 1420 6544 18 0 0 chrX 109558660 109559402 -57090894 - L1Md_A LINE L1 0 6582 5841 8 1420 3434 12 0 0 chrX 109559403 109559824 -57090472 + L1_Mm LINE L1 1919 2339 -3544 8 1420 23328 117 6 17 chrX 109559820 109563690 -57086606 - L1_Mus3 LINE L1 -769 5114 1289 8 1420 4986 42 0 0 chrX 109563690 109564285 -57086011 - L1Md_F2 LINE L1 -3 6579 5985 8 1420 23328 84 0 113 chrX 109564285 109564504 -57085792 - L1_Mus3 LINE L1 -5350 1288 1070 8 1420 12659 73 141 6 chrX 109564499 109566503 -57083793 - L1_Mm LINE L1 -869 5014 2739 8 1420 634 313 66 46 chrX 109566795 109567475 -57082821 - L1MCa LINE L1 -5037 1471 778 9 1420 18536 78 5 3 chrX 109567477 109571076 -57079220 + L1Md_F LINE L1 366 3970 -1913 9 1420 1977 88 0 27 chrX 109571076 109571368 -57078928 + L1Md_F2 LINE L1 6298 6581 -1 9 1420 2739 39 6 0 chrX 109571409 109571745 -57078551 - ORR1A0 LTR MaLR -8 338 1 9 1420 681 264 69 52 chrX 109571745 109571893 -57078403 + RMER5 LTR ERV1 288 437 -97 9 1420 2257 119 3 0 chrX 109571893 109572221 -57078075 - ORR1A4 LTR MaLR 0 329 1 9 1420 681 264 69 52 chrX 109572221 109572300 -57077996 + RMER5 LTR ERV1 438 519 -15 9 1420 23 78 0 0 chrX 109572377 109572428 -57077868 + AT_rich Low_complexity Low_complexity 1 51 0 9 1420 644 275 14 14 chrX 109572444 109572584 -57077712 - RSINE1 SINE B4 -21 144 5 9 1420 586 264 138 4 chrX 109573146 109573386 -57076910 - RLTR10A LTR ERVK 0 411 140 9 1420 631 220 29 23 chrX 109574797 109574969 -57075327 + HAL1-2a_MD LINE L1 2355 2527 -497 9 1420 394 92 64 26 chrX 109575672 109575750 -57074546 - Lx LINE L1 -5 6649 6569 1 1421 5352 79 13 16 chrX 109576568 109577316 -57072980 - Lx3_Mus LINE L1 0 7009 6264 1 1421 580 309 27 7 chrX 109577331 109577481 -57072815 - RSINE1 SINE B4 -10 155 3 1 1421 444 284 12 24 chrX 109577529 109577695 -57072601 - L1M2 LINE L1 -1187 4956 4793 1 1421 294 303 26 0 chrX 109577698 109577710 -57072586 - ID SINE ID -141 83 6 1 1421 336 266 0 0 chrX 109577710 109577774 -57072522 - ID4_ SINE ID -14 69 6 1 1421 314 236 224 14 chrX 109577776 109577999 -57072297 - L1M2 LINE L1 -1349 4794 4525 1 1421 3877 34 2 11 chrX 109578562 109579036 -57071260 + L1Md_F3 LINE L1 6115 6584 0 1 1421 323 145 100 14 chrX 109580393 109580463 -57069833 - HAL1-3A_ME LINE L1 -807 2051 1976 1 1421 236 222 0 0 chrX 109580741 109580786 -57069510 - MIR SINE MIR -22 240 196 1 1421 22 35 0 0 chrX 109581216 109581245 -57069051 + AT_rich Low_complexity Low_complexity 1 29 0 1 1421 258 212 57 57 chrX 109581353 109581458 -57068838 + L1M2 LINE L1 5131 5235 -908 1 1421 333 47 0 0 chrX 109581467 109581510 -57068786 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1421 693 292 83 28 chrX 109581546 109582041 -57068255 + L1M2 LINE L1 4653 5203 -644 1 1421 3992 36 0 6 chrX 109582041 109582519 -57067777 - L1_Mus1 LINE L1 -1 6566 6092 1 1421 523 294 151 44 chrX 109582519 109582567 -57067729 + L1M2 LINE L1 5204 5254 -593 1 1421 1012 222 66 22 chrX 109582873 109583477 -57066819 + Lx6 LINE L1 888 1442 -4435 1 1421 7029 31 0 4 chrX 109583482 109584316 -57065980 + L1Md_F2 LINE L1 5737 6567 -15 1 1421 258 132 0 0 chrX 109584375 109584428 -57065868 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 1421 1781 205 52 2 chrX 109584444 109584865 -57065431 + Lx6 LINE L1 2051 2492 -3385 1 1421 7331 182 65 11 chrX 109584862 109585454 -57064842 + Lx6 LINE L1 4115 4724 -1156 1 1421 486 0 0 0 chrX 109585454 109585508 -57064788 + (TAAAA)n Simple_repeat Simple_repeat 1 54 0 1 1421 7331 217 88 31 chrX 109585508 109587297 -57062999 + Lx6 LINE L1 4725 6647 -7 1 1421 1957 169 98 6 chrX 109587791 109588149 -57062147 - MTC LTR MaLR -8 413 23 1 1421 2224 148 12 31 chrX 109588636 109589053 -57061243 + RLTR9E LTR ERVK 1 409 0 1 1421 481 214 13 143 chrX 109589079 109589303 -57060993 + MMETn-int LTR ERVK 102 296 -4548 1 1421 321 146 0 18 chrX 109589296 109589352 -57060944 + ETnERV2-int LTR ERVK 2091 2145 -5099 1 1421 272 104 0 0 chrX 109589787 109589835 -57060461 + RLTR19-int LTR ERVK 141 188 -5218 1 1421 284 253 53 13 chrX 109589828 109589904 -57060392 + RLTR19-int LTR ERVK 741 819 -4587 1 1421 569 183 26 0 chrX 109589909 109590024 -57060272 + RLTR19-int LTR ERVK 938 1055 -5082 1 1421 489 277 0 43 chrX 109590042 109590204 -57060092 + ETnERV2-int LTR ERVK 2454 2608 -4798 1 1421 21525 108 15 21 chrX 109590196 109593544 -57056752 + ETnERV2-int LTR ERVK 3047 6373 -1033 1 1421 33807 51 1 3 chrX 109593544 109599193 -57051103 + L1Md_T LINE L1 1 5589 -297 1 1421 8279 42 0 0 chrX 109599193 109600189 -57050107 + L1Md_T LINE L1 5590 6585 0 1 1421 353 154 15 0 chrX 109600224 109600289 -57050007 + ETnERV2-int LTR ERVK 6357 6422 -984 1 1421 466 96 0 27 chrX 109600504 109600579 -57049717 + ETnERV2-int LTR ERVK 7331 7403 -3 1 1421 2269 151 12 26 chrX 109600581 109600996 -57049300 + RLTR9E LTR ERVK 1 409 0 1 1421 235 317 73 19 chrX 109601017 109601217 -57049079 - MIRc SINE MIR -5 257 45 1 1421 822 283 105 12 chrX 109601257 109601686 -57048610 + Lx8 LINE L1 5277 5745 -135 1 1421 1750 331 82 40 chrX 109601706 109602030 -57048266 + Lx8 LINE L1 5837 6163 -1533 1 1421 576 77 0 0 chrX 109602030 109602108 -57048188 + (TG)n Simple_repeat Simple_repeat 2 79 0 1 1421 2265 331 53 23 chrX 109602108 109603294 -57047002 + Lx8 LINE L1 6164 7415 -58 1 1421 210 143 0 0 chrX 109603911 109603946 -57046350 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 1 1421 3138 119 0 15 chrX 109603948 109604417 -57045879 - Lx3A LINE L1 -5 6976 6515 1 1421 1926 308 49 82 chrX 109604418 109605572 -57044724 - Lx8 LINE L1 0 7473 6357 1 1421 383 251 12 0 chrX 109605574 109605666 -57044630 - MIR SINE MIR -61 147 55 1 1421 519 256 42 8 chrX 109605945 109606063 -57044233 + RSINE1 SINE B4 8 129 -36 1 1421 2103 154 66 19 chrX 109606192 109606569 -57043727 + Lx3C LINE L1 6580 6974 -2 1 1421 305 321 7 97 chrX 109606672 109606692 -57043604 + ID_B1 SINE B4 79 214 -10 1 1421 576 291 0 22 chrX 109606692 109606815 -57043481 + B1_Mur1 SINE Alu 13 139 -10 1 1421 306 0 0 0 chrX 109606820 109606854 -57043442 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 1421 266 309 134 83 chrX 109606862 109607102 -57043194 - MLT1J LTR MaLR -46 466 205 1 1421 201 315 108 23 chrX 109607485 109607615 -57042681 + L3 LINE CR1 4247 4387 -102 1 1421 262 337 87 29 chrX 109607680 109607784 -57042512 + PB1D7 SINE Alu 6 115 -5 1 1421 285 146 0 0 chrX 109610163 109610211 -57040085 + (TTA)n Simple_repeat Simple_repeat 1 48 0 1 1421 566 223 76 0 chrX 109610224 109610381 -57039915 - Lx6 LINE L1 -14 7446 7278 1 1421 3129 136 33 16 chrX 109610391 109610973 -57039323 - Lx2B LINE L1 -310 6690 6099 1 1421 29 0 0 0 chrX 109611278 109611307 -57038989 + AT_rich Low_complexity Low_complexity 1 29 0 1 1421 1189 65 12 0 chrX 109611643 109611811 -57038485 + (TTTC)n Simple_repeat Simple_repeat 1 170 0 1 1421 22 70 0 0 chrX 109611895 109611938 -57038358 + AT_rich Low_complexity Low_complexity 1 43 0 1 1421 21 57 0 0 chrX 109612179 109612214 -57038082 + AT_rich Low_complexity Low_complexity 1 35 0 1 1421 2375 226 20 14 chrX 109612631 109613121 -57037175 - Lx6 LINE L1 -894 6566 6074 1 1421 411 279 103 7 chrX 109613218 109613373 -57036923 - RMER15 LTR ERVL 0 575 406 1 1421 21 0 0 0 chrX 109613896 109613917 -57036379 + AT_rich Low_complexity Low_complexity 1 21 0 1 1421 10657 65 62 5 chrX 109613941 109614651 -57035645 + L1Md_F2 LINE L1 4027 4734 -1149 1 1421 246 32 0 0 chrX 109614651 109614682 -57035614 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1421 10657 65 62 5 chrX 109614682 109615447 -57034849 + L1Md_F2 LINE L1 4735 5586 -297 1 1421 7097 79 23 14 chrX 109615447 109616482 -57033814 + L1Md_F2 LINE L1 5587 6582 0 1 1421 792 225 197 0 chrX 109616878 109617056 -57033240 - B3 SINE B2 0 216 4 1 1421 795 256 70 0 chrX 109617085 109617284 -57033012 - B3 SINE B2 -3 213 1 1 1421 477 0 0 0 chrX 109618563 109618616 -57031680 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1421 414 69 0 0 chrX 109620045 109620103 -57030193 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1421 462 18 0 0 chrX 109620103 109620157 -57030139 + (GA)n Simple_repeat Simple_repeat 1 55 0 1 1421 475 266 9 18 chrX 109620364 109620475 -57029821 - PB1D10 SINE Alu -1 116 7 1 1421 245 250 23 91 chrX 109620396 109620484 -57029812 - MT2B LTR ERVL -357 244 163 1 1421 388 257 65 18 chrX 109620615 109620785 -57029511 + L1_Mur3 LINE L1 5173 5350 -530 1 1421 1083 193 126 4 chrX 109620793 109621032 -57029264 - Lx7 LINE L1 -1828 5868 5601 1 1421 541 219 126 31 chrX 109621029 109621251 -57029045 - Lx7 LINE L1 -444 5436 5194 1 1421 1878 304 41 10 chrX 109621262 109621877 -57028419 - Lx8 LINE L1 -651 6822 6189 1 1421 23 0 0 0 chrX 109621930 109621953 -57028343 + AT_rich Low_complexity Low_complexity 1 23 0 1 1421 517 177 29 2 chrX 109621953 109622074 -57028222 - B1_Mur1 SINE Alu -16 133 4 1 1421 279 0 0 0 chrX 109622091 109622122 -57028174 + (TCTCTG)n Simple_repeat Simple_repeat 1 31 0 1 1421 444 278 127 30 chrX 109622399 109622596 -57027700 - L2 LINE L2 -1194 2225 2010 1 1421 6956 78 24 5 chrX 109622827 109624057 -57026239 + L1Md_F2 LINE L1 5332 6580 -2 1 1421 274 314 79 40 chrX 109624305 109624507 -57025789 + L2a LINE L2 3216 3425 -1 1 1421 1261 71 6 0 chrX 109624645 109624815 -57025481 - L1_Mus1 LINE L1 -2 6565 6395 1 1421 364 165 165 0 chrX 109624815 109624889 -57025407 - L1_Mus2 LINE L1 -414 6152 6066 1 1421 193 375 11 22 chrX 109626638 109626728 -57023568 + MIRc SINE MIR 106 194 -74 1 1421 282 283 226 0 chrX 109626778 109626884 -57023412 - MIR SINE MIR -45 217 88 1 1421 225 197 16 32 chrX 109627380 109627443 -57022853 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 1421 708 262 16 16 chrX 109627633 109627815 -57022481 - B3A SINE B2 -16 182 1 1 1421 230 308 113 63 chrX 109627856 109627998 -57022298 + MIRb SINE MIR 72 220 -48 1 1421 379 314 34 19 chrX 109628386 109628594 -57021702 + L1ME2z LINE L1 6225 6435 -9 1 1421 21 0 0 0 chrX 109629695 109629716 -57020580 + AT_rich Low_complexity Low_complexity 1 21 0 1 1421 1866 186 47 6 chrX 109631347 109631688 -57018608 + ORR1B2 LTR MaLR 5 359 -8 1 1421 359 247 160 11 chrX 109632052 109632146 -57018150 - PB1D7 SINE Alu -6 114 7 1 1421 462 175 275 7 chrX 109632380 109632518 -57017778 - Lx4B LINE L1 -6 7052 6878 1 1421 245 264 0 36 chrX 109632712 109632767 -57017529 + RSINE1 SINE B4 80 132 -33 1 1421 2563 218 45 79 chrX 109633655 109634520 -57015776 - RMER17B LTR ERVK -135 773 1 1 1421 2264 191 97 53 chrX 109634544 109635130 -57015166 - RMER17A-int LTR ERVK -33 1695 1084 1 1421 385 228 50 0 chrX 109635187 109635288 -57015008 - RMER17A-int LTR ERVK -635 1093 988 1 1421 626 172 7 36 chrX 109635330 109635469 -57014827 - RMER17A-int LTR ERVK -737 991 857 1 1421 2053 168 24 51 chrX 109635525 109635976 -57014320 - RMER17B LTR ERVK -519 439 1 1 1421 737 137 36 7 chrX 109638373 109638513 -57011783 - Lx6 LINE L1 -9 7451 7308 1 1421 579 272 51 7 chrX 109638697 109638834 -57011462 + RSINE1 SINE B4 8 150 -15 1 1421 257 298 20 145 chrX 109638834 109638897 -57011399 + B3 SINE B2 7 181 -35 1 1421 351 121 0 0 chrX 109638928 109638986 -57011310 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1421 1105 72 0 0 chrX 109639501 109639639 -57010657 + B1_Mm SINE Alu 1 138 -9 1 1421 279 0 0 0 chrX 109639639 109639670 -57010626 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1421 240 325 0 0 chrX 109639671 109639748 -57010548 + (TATG)n Simple_repeat Simple_repeat 3 79 0 1 1421 743 313 13 63 chrX 109639752 109640055 -57010241 - B4 SINE B4 0 292 5 1 1421 827 256 62 0 chrX 109640078 109640273 -57010023 - B3 SINE B2 -9 207 1 1 1421 3444 126 15 4 chrX 109640527 109641071 -57009225 - Lx LINE L1 0 6654 6105 1 1421 6525 109 75 12 chrX 109641071 109642740 -57007556 - L1VL2 LINE L1 -1746 1869 73 1 1421 27 0 0 0 chrX 109642750 109642777 -57007519 + AT_rich Low_complexity Low_complexity 1 27 0 1 1421 405 234 115 20 chrX 109642960 109643108 -57007188 - L1MA7 LINE L1 -344 5947 5786 1 1421 861 148 51 34 chrX 109643119 109643294 -57007002 - B2_Mm2 SINE B2 -9 186 9 1 1421 247 260 211 12 chrX 109643308 109643479 -57006817 + L1M2 LINE L1 5512 5716 -584 1 1421 206 336 91 21 chrX 109643574 109643717 -57006579 + L3 LINE CR1 4149 4301 -188 1 1421 1076 346 68 58 chrX 109644484 109645373 -57004923 - Lx8 LINE L1 -6 7467 6571 1 1421 778 216 327 23 chrX 109645429 109645736 -57004560 - MTD LTR MaLR 0 419 20 1 1421 414 314 37 62 chrX 109645963 109646204 -57004092 + CYRA11_Mm Unknown Y-chromosome 142 376 -241 1 1421 1045 211 28 14 chrX 109645998 109646214 -57004082 - URR1B DNA MER1_type -6 219 1 1 1421 416 337 19 124 chrX 109646214 109646528 -57003768 + MTEa LTR MaLR 35 315 -64 2 1421 434 319 70 21 chrX 109646917 109647103 -57003193 - Lx8 LINE L1 -1066 6407 6213 1 1421 1146 288 96 27 chrX 109647269 109648062 -57002234 - Lx8 LINE L1 -1790 5906 5055 1 1421 794 267 30 17 chrX 109648094 109648330 -57001966 + L1M2 LINE L1 4764 5002 -1141 2 1421 740 279 0 6 chrX 109648538 109648711 -57001585 + B3 SINE B2 45 216 0 2 1421 400 338 25 13 chrX 109648749 109648908 -57001388 - RSINE1 SINE B4 0 165 5 2 1421 294 211 49 62 chrX 109648912 109648993 -57001303 + MER3 DNA MER1_type 129 208 -1 2 1421 240 283 0 0 chrX 109648953 109649006 -57001290 - MER3 DNA MER1_type -121 88 36 2 1421 471 113 0 0 chrX 109649313 109649384 -57000912 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 1421 226 269 37 49 chrX 109650383 109650465 -56999831 + MLT1A1 LTR MaLR 318 398 -10 2 1421 3749 55 27 2 chrX 109650671 109651159 -56999137 - L1_Mus1 LINE L1 0 6567 6068 2 1421 316 272 135 5 chrX 109651187 109651372 -56998924 - Lx9 LINE L1 -9 7635 7427 2 1421 843 282 14 28 chrX 109651623 109651835 -56998461 + B3 SINE B2 1 209 -7 2 1421 23 54 0 0 chrX 109651835 109651872 -56998424 + AT_rich Low_complexity Low_complexity 1 37 0 2 1421 243 0 0 0 chrX 109651900 109651927 -56998369 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1421 1041 89 14 7 chrX 109651927 109652065 -56998231 - B1_Mur4 SINE Alu -10 140 1 2 1421 263 216 0 13 chrX 109652372 109652447 -56997849 + L1MB8 LINE L1 4362 4435 -1711 2 1421 39 0 0 0 chrX 109652495 109652534 -56997762 + AT_rich Low_complexity Low_complexity 1 39 0 2 1421 258 32 0 0 chrX 109652572 109652603 -56997693 + (TTG)n Simple_repeat Simple_repeat 3 33 0 2 1421 1575 148 82 9 chrX 109652613 109652915 -56997381 - ORR1B2 LTR MaLR -32 346 36 2 1421 276 248 95 8 chrX 109652915 109653041 -56997255 + L1MB8 LINE L1 4572 4708 -1432 2 1421 307 281 44 0 chrX 109653049 109653163 -56997133 - L1M2 LINE L1 -764 5539 5421 2 1421 2746 203 81 8 chrX 109653354 109653956 -56996340 - Lx9 LINE L1 -60 7584 6939 2 1421 33 0 0 0 chrX 109653975 109654008 -56996288 + AT_rich Low_complexity Low_complexity 1 33 0 2 1421 201 161 54 0 chrX 109654394 109654450 -56995846 + (TTATA)n Simple_repeat Simple_repeat 5 63 0 2 1421 255 333 16 0 chrX 109654461 109654584 -56995712 + L1MA4 LINE L1 5789 5913 -387 2 1421 400 252 0 63 chrX 109654990 109655117 -56995179 - L1M2 LINE L1 -1396 4747 4629 2 1421 252 335 50 27 chrX 109655162 109655383 -56994913 + L1MA5 LINE L1 6050 6275 -25 2 1421 661 238 51 73 chrX 109655643 109655820 -56994476 - B3A SINE B2 -11 205 33 2 1421 320 287 79 0 chrX 109655824 109655925 -56994371 + L1MB8 LINE L1 4936 5044 -1102 2 1421 1300 297 104 31 chrX 109655955 109656765 -56993531 + L1MB8 LINE L1 5304 6172 -6 2 1421 897 224 25 5 chrX 109656842 109657044 -56993252 - B3 SINE B2 -6 210 5 2 1421 7660 68 8 2 chrX 109657141 109658267 -56992029 - L1Md_F2 LINE L1 -1 6581 5447 2 1421 8312 33 1 0 chrX 109658263 109659674 -56990622 - L1Md_T LINE L1 -1 6581 5170 2 1421 2375 47 0 0 chrX 109659674 109659973 -56990323 - L1_Mm LINE L1 -420 5463 5165 2 1421 263 276 47 94 chrX 109660173 109660301 -56989995 - MIRb SINE MIR -36 232 111 2 1421 2206 134 26 26 chrX 109660603 109660985 -56989311 - Lx3C LINE L1 -2 6974 6593 2 1421 590 266 55 49 chrX 109662013 109662423 -56987873 + Lx8 LINE L1 5702 6155 -1318 2 1421 516 299 41 14 chrX 109662527 109662673 -56987623 + B3A SINE B2 1 150 -48 2 1421 435 52 0 0 chrX 109662677 109662735 -56987561 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 1421 486 0 0 0 chrX 109662737 109662791 -56987505 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 2 1421 3630 291 56 19 chrX 109662805 109663966 -56986330 + Lx8 LINE L1 6270 7473 0 2 1421 240 35 0 0 chrX 109664096 109664125 -56986171 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1421 1151 139 43 5 chrX 109664500 109664710 -56985586 + Lx2B LINE L1 6778 6995 -5 2 1421 1101 345 130 51 chrX 109665060 109666134 -56984162 - L2 LINE L2 -652 2767 1609 2 1421 1843 198 55 24 chrX 109666278 109666693 -56983603 - RMER19C LTR ERVK 0 611 184 2 1421 495 0 0 0 chrX 109666831 109666886 -56983410 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1421 889 258 142 47 chrX 109666963 109667387 -56982909 - Lx9 LINE L1 -206 7438 6975 2 1421 1119 301 26 16 chrX 109667414 109667802 -56982494 - Lx9 LINE L1 -895 6749 6358 2 1421 626 34 11 0 chrX 109667804 109667913 -56982383 + L1Md_F2 LINE L1 6474 6582 0 2 1421 23 33 0 0 chrX 109667931 109667961 -56982335 + AT_rich Low_complexity Low_complexity 1 30 0 2 1421 377 260 127 35 chrX 109668046 109668305 -56981991 - Lx9 LINE L1 -1531 6113 5831 2 1421 188 345 0 0 chrX 109668305 109668363 -56981933 - L2 LINE L2 -1919 1500 1443 2 1421 216 0 0 0 chrX 109670055 109670079 -56980217 + (TTG)n Simple_repeat Simple_repeat 1 24 0 2 1421 34 24 0 0 chrX 109670535 109670576 -56979720 + AT_rich Low_complexity Low_complexity 1 41 0 2 1421 21 36 0 0 chrX 109670983 109671011 -56979285 + AT_rich Low_complexity Low_complexity 1 28 0 2 1421 345 306 0 0 chrX 109671931 109672003 -56978293 + RSINE1 SINE B4 23 94 -71 2 1421 2722 306 21 28 chrX 109672109 109672473 -56977823 + Lx8 LINE L1 6212 6570 -903 2 1421 264 30 0 0 chrX 109672473 109672506 -56977790 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 2 1421 2722 306 21 28 chrX 109672506 109673117 -56977179 + Lx8 LINE L1 6571 7181 -292 2 1421 3435 136 77 52 chrX 109673318 109673695 -56976601 + RMER6C LTR ERVK 1 366 -324 2 1421 194 57 57 0 chrX 109673695 109673730 -56976566 + (CAGAGA)n Simple_repeat Simple_repeat 6 42 0 2 1421 3435 136 77 52 chrX 109673730 109674025 -56976271 + RMER6C LTR ERVK 367 690 0 2 1421 551 269 14 43 chrX 109674025 109674162 -56976134 + RSINE1 SINE B4 17 149 -16 2 1421 266 303 30 20 chrX 109674516 109674617 -56975679 - MTEa LTR MaLR -262 117 16 2 1421 25 31 0 0 chrX 109674650 109674682 -56975614 + AT_rich Low_complexity Low_complexity 1 32 0 2 1421 318 283 43 65 chrX 109674682 109674867 -56975429 - Lx6 LINE L1 -8 7452 7272 2 1421 730 119 8 0 chrX 109674963 109675097 -56975199 + Lx9 LINE L1 7504 7638 -6 2 1421 412 239 7 121 chrX 109675120 109675288 -56975008 - MTE-int LTR MaLR -172 1408 1243 2 1421 187 266 37 25 chrX 109676147 109676228 -56974068 + MIR SINE MIR 166 247 -15 2 1421 656 221 0 0 chrX 109676611 109676738 -56973558 + B1_Mus2 SINE Alu 19 145 -2 2 1421 251 28 28 0 chrX 109676745 109676781 -56973515 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2 1421 4243 193 68 9 chrX 109676961 109677906 -56972390 + Lx3C LINE L1 5966 6965 -11 2 1421 793 223 48 0 chrX 109678063 109678269 -56972027 - L1_Mur3 LINE L1 -3486 2394 2179 2 1421 1372 220 25 4 chrX 109678355 109678629 -56971667 - MTC LTR MaLR 0 421 142 2 1421 1928 155 66 29 chrX 109678618 109678996 -56971300 - RMER6B LTR ERVK -63 398 7 2 1421 201 39 0 0 chrX 109679011 109679037 -56971259 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1421 180 0 0 0 chrX 109679037 109679056 -56971240 + (CG)n Simple_repeat Simple_repeat 2 21 0 2 1421 549 262 7 0 chrX 109679085 109679265 -56971031 - L1_Mur3 LINE L1 -934 4943 4763 2 1421 563 229 22 172 chrX 109679506 109679668 -56970628 + RLTR23 LTR ERV1 1 134 -296 2 1421 2630 132 82 19 chrX 109679668 109680133 -56970163 - RLTR19A LTR ERVK 0 496 3 2 1421 563 229 22 172 chrX 109680133 109680197 -56970099 + RLTR23 LTR ERV1 135 193 -237 2 1421 698 209 46 105 chrX 109680246 109680465 -56969831 + RLTR23 LTR ERV1 225 430 0 2 1421 297 0 0 0 chrX 109681244 109681277 -56969019 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 2 1421 2697 176 74 31 chrX 109681348 109681998 -56968298 + RLTR19-int LTR ERVK 445 1122 -5015 2 1421 2033 167 55 41 chrX 109682265 109683030 -56967266 + Lx2B LINE L1 856 1618 -4268 2 1421 9759 168 25 7 chrX 109683034 109683732 -56966564 + Lx2B LINE L1 3918 4621 -1256 2 1421 210 37 0 0 chrX 109683732 109683759 -56966537 + (CAA)n Simple_repeat Simple_repeat 2 28 0 2 1421 9759 142 16 3 chrX 109683759 109685987 -56964309 + Lx2B LINE L1 4622 6895 -105 2 1421 286 179 0 0 chrX 109686029 109686085 -56964211 + RLTR19-int LTR ERVK 1584 1639 -4498 2 1421 398 155 48 0 chrX 109686087 109686171 -56964125 + RLTR19-int LTR ERVK 1840 1927 -4210 2 1421 734 188 13 133 chrX 109686229 109686530 -56963766 + RLTR19-int LTR ERVK 2063 2327 -3810 2 1421 3014 194 41 38 chrX 109686581 109687289 -56963007 + RLTR19-int LTR ERVK 2341 3050 -3087 2 1421 5455 170 15 46 chrX 109687305 109688468 -56961828 + RLTR19-int LTR ERVK 3246 4371 -1766 2 1421 863 236 101 105 chrX 109688591 109689018 -56961278 + RLTR23 LTR ERV1 1 425 -5 2 1421 657 0 0 0 chrX 109689077 109689150 -56961146 + (TC)n Simple_repeat Simple_repeat 1 73 0 2 1421 291 308 21 14 chrX 109690119 109690264 -56960032 + MER52-int LTR ERV1 4986 5131 -1960 2 1421 33722 72 5 4 chrX 109691104 109697375 -56952921 - L1Md_F2 LINE L1 -2 6580 307 2 1421 2869 337 62 41 chrX 109697412 109699508 -56950788 + RodERV21-int LTR ERV1 2718 4859 -132 2 1421 318 177 12 25 chrX 109699921 109700002 -56950294 - L1_Mur3 LINE L1 -1139 4741 4662 2 1421 7278 88 11 9 chrX 109700031 109701394 -56948902 - L1_Mus3 LINE L1 -2 6636 5293 2 1421 1947 13 13 13 chrX 109701394 109701630 -56948666 - L1Md_T LINE L1 -1 6581 6346 2 1421 7238 126 12 41 chrX 109701630 109702427 -56947869 - L1_Mus3 LINE L1 -591 5295 4540 2 1421 6934 154 25 9 chrX 109702443 109703665 -56946631 + Lx2 LINE L1 5757 6997 0 2 1421 759 325 122 17 chrX 109703674 109704141 -56946155 + Lx8 LINE L1 6922 7437 -36 2 1421 1323 299 32 56 chrX 109704228 109705196 -56945100 - Lx6 LINE L1 -30 7430 6100 2 1421 231 61 0 0 chrX 109705239 109705272 -56945024 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1421 1190 291 85 28 chrX 109705339 109705951 -56944345 - Lx8 LINE L1 -123 7350 6704 2 1421 7232 59 20 6 chrX 109705948 109707020 -56943276 - L1Md_F2 LINE L1 -12 6570 5496 2 177 5268 80 3 0 chrX 109707013 109707779 -56942517 + L1_Mm LINE L1 2868 3635 -2248 2 1422 309 247 11 45 chrX 109707774 109707863 -56942433 - Lx8 LINE L1 -756 6717 6632 2 1422 1841 175 33 49 chrX 109708483 109708850 -56941446 - RLTR31_Mm LTR ERVK -71 490 130 2 1422 2149 230 154 8 chrX 109708906 109709774 -56940522 - Lx7 LINE L1 -578 7118 6096 2 1422 423 181 0 0 chrX 109709779 109709851 -56940445 + RMER6C LTR ERVK 604 675 -15 2 1422 1216 179 118 40 chrX 109709921 109710242 -56940054 - RMER6C LTR ERVK -104 586 241 2 1422 6491 38 4 1 chrX 109710501 109711284 -56939012 + L1Md_F2 LINE L1 5794 6578 -4 2 1422 290 309 32 19 chrX 109711382 109711537 -56938759 - L1MC5 LINE L1 -1090 6871 6715 2 1422 208 255 0 78 chrX 109712102 109712204 -56938092 - L2 LINE L2 -2942 477 384 2 1422 538 56 0 43 chrX 109712935 109713028 -56937268 + (TCTCTG)n Simple_repeat Simple_repeat 2 90 0 2 1422 252 0 0 0 chrX 109713028 109713056 -56937240 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 1422 323 154 15 0 chrX 109713293 109713358 -56936938 + CT-rich Low_complexity Low_complexity 1 66 0 2 1422 510 17 0 0 chrX 109713931 109713990 -56936306 + (GA)n Simple_repeat Simple_repeat 1 59 0 2 1422 210 156 0 0 chrX 109718444 109718489 -56931807 + (TATG)n Simple_repeat Simple_repeat 4 48 0 2 1422 433 319 88 29 chrX 109718492 109718663 -56931633 - B3A SINE B2 -16 182 2 3 1422 425 280 85 148 chrX 109719391 109719756 -56930540 + MTEb LTR MaLR 27 368 -11 3 1422 369 0 0 0 chrX 109720003 109720044 -56930252 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1422 1596 87 0 13 chrX 109720080 109720312 -56929984 - L1_Mus2 LINE L1 -1 6565 6337 3 1422 226 128 0 21 chrX 109720316 109720364 -56929932 - L1MB7 LINE L1 -16 6168 6122 3 1422 767 251 10 50 chrX 109720382 109720583 -56929713 - B3A SINE B2 -5 193 1 3 1422 277 342 60 7 chrX 109720686 109720836 -56929460 - L1MB7 LINE L1 -146 6038 5881 3 1422 35 41 0 0 chrX 109722114 109722163 -56928133 + AT_rich Low_complexity Low_complexity 1 49 0 3 1422 393 292 52 26 chrX 109722381 109722497 -56927799 + RSINE1 SINE B4 2 120 -45 3 1422 21 0 0 0 chrX 109722613 109722634 -56927662 + AT_rich Low_complexity Low_complexity 1 21 0 3 1422 5834 110 30 11 chrX 109723385 109724320 -56925976 - Lx3B LINE L1 -4 6969 6017 3 1422 1590 140 127 17 chrX 109724365 109724720 -56925576 - Lx9 LINE L1 -1 7643 7250 3 1422 633 269 0 0 chrX 109724791 109724925 -56925371 + ID_B1 SINE B4 83 216 -8 3 1422 31 26 0 0 chrX 109725710 109725748 -56924548 + AT_rich Low_complexity Low_complexity 1 38 0 3 1422 6764 168 37 55 chrX 109725748 109726381 -56923915 - Lx3C LINE L1 -2 6974 6386 3 1422 1123 75 0 0 chrX 109726381 109726528 -56923768 - B1_Mus2 SINE Alu 0 147 1 3 1422 7036 152 71 23 chrX 109726528 109728281 -56922015 - Lx3C LINE L1 -591 6385 4524 3 1422 24 32 0 0 chrX 109728292 109728323 -56921973 + AT_rich Low_complexity Low_complexity 1 31 0 3 1422 24 32 0 0 chrX 109728435 109728466 -56921830 + AT_rich Low_complexity Low_complexity 1 31 0 3 1422 8172 127 45 16 chrX 109730113 109731462 -56918834 - Lx3C LINE L1 -2 6974 5587 3 1422 7831 91 3 11 chrX 109731478 109733350 -56916946 - L1Md_F2 LINE L1 0 6582 4773 3 1422 413 370 0 49 chrX 109733351 109733493 -56916803 - ID_B1 SINE B4 -6 218 84 3 1422 2799 80 90 5 chrX 109733892 109734305 -56915991 - Lx3_Mus LINE L1 -11 6998 6551 3 1422 652 36 321 0 chrX 109734375 109734487 -56915809 - B1_Mus1 SINE Alu 0 148 1 3 1422 732 300 89 20 chrX 109735098 109735605 -56914691 - L1MB7 LINE L1 -3 6181 5640 3 1422 322 247 51 2 chrX 109736166 109736259 -56914037 + PB1D10 SINE Alu 14 109 -8 3 1422 21 0 0 0 chrX 109736338 109736359 -56913937 + AT_rich Low_complexity Low_complexity 1 21 0 3 1422 21 36 0 0 chrX 109736927 109736955 -56913341 + AT_rich Low_complexity Low_complexity 1 28 0 3 1422 249 33 0 0 chrX 109736955 109736985 -56913311 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1422 296 353 71 33 chrX 109737960 109738171 -56912125 + MIR SINE MIR 14 232 -30 3 1422 21 0 0 0 chrX 109738764 109738785 -56911511 + AT_rich Low_complexity Low_complexity 1 21 0 3 1422 275 319 69 26 chrX 109738847 109738963 -56911333 - MIRb SINE MIR -58 210 90 3 1422 1205 41 0 0 chrX 109739941 109740087 -56910209 + B1_Mus2 SINE Alu 2 147 0 3 1422 216 0 0 0 chrX 109740087 109740111 -56910185 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1422 469 293 0 0 chrX 109740432 109740548 -56909748 + PB1D10 SINE Alu 1 116 -1 3 1422 1526 215 44 67 chrX 109742271 109742659 -56907637 - ORR1C2 LTR MaLR 0 384 6 3 1422 2015 162 273 41 chrX 109742871 109743431 -56906865 - RMER6C LTR ERVK 0 690 1 3 1422 8148 44 4 3 chrX 109743547 109745178 -56905118 - L1Md_F2 LINE L1 0 6582 4951 3 1422 1880 180 124 12 chrX 109750127 109750610 -56899686 + RMER6C LTR ERVK 154 690 0 3 1422 923 76 0 0 chrX 109750980 109751098 -56899198 + Lx3_Mus LINE L1 6750 6867 -142 3 1422 757 226 0 0 chrX 109751118 109751255 -56899041 - B1_Mus2 SINE Alu -7 140 4 3 1422 1308 75 48 5 chrX 109754483 109754670 -56895626 - B2_Mm2 SINE B2 0 195 1 3 1422 1175 98 92 0 chrX 109754920 109755094 -56895202 + B2_Mm2 SINE B2 1 190 -5 3 1422 801 144 0 0 chrX 109755257 109755382 -56894914 - B1_Mur4 SINE Alu -21 129 5 3 1422 384 239 42 97 chrX 109755263 109755407 -56894889 - MT2B LTR ERVL -323 278 143 3 1422 316 263 66 0 chrX 109755910 109755986 -56894310 - MER20 DNA MER1_type 0 219 139 3 1422 666 309 159 33 chrX 109757157 109757632 -56892664 + Tigger7 DNA MER2_type 39 541 -9 3 1422 396 0 0 0 chrX 109758327 109758371 -56891925 + (TAA)n Simple_repeat Simple_repeat 1 44 0 3 1422 1256 239 180 55 chrX 109759113 109759646 -56890650 + Lx9 LINE L1 7039 7638 -6 3 1422 24 109 0 0 chrX 109759883 109759984 -56890312 + AT_rich Low_complexity Low_complexity 1 101 0 3 1422 352 324 47 121 chrX 109760025 109760257 -56890039 - B3A SINE B2 -1 215 1 3 1422 24 32 0 0 chrX 109762821 109762852 -56887444 + AT_rich Low_complexity Low_complexity 1 31 0 3 1422 621 218 7 47 chrX 109762855 109763004 -56887292 - B1_Mur1 SINE Alu -5 144 2 3 1422 1889 40 4 35 chrX 109763289 109763549 -56886747 + L1_Mus2 LINE L1 6314 6565 -1 3 1422 694 281 7 2 chrX 109763784 109763963 -56886333 - B3 SINE B2 -5 211 32 3 1422 848 131 204 16 chrX 109764145 109764331 -56885965 + URR1A DNA MER1_type 5 225 -1 3 1422 637 118 16 0 chrX 109764387 109764514 -56885782 + L1Md_F2 LINE L1 6452 6580 -2 3 1422 1080 95 0 0 chrX 109764523 109764670 -56885626 + B1_Mus1 SINE Alu 2 148 0 3 1422 258 105 0 0 chrX 109764670 109764708 -56885588 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 3 1422 512 339 56 92 chrX 109765264 109765865 -56884431 + L1MDa LINE L1 337 1231 -5402 3 1422 384 22 0 0 chrX 109765958 109766003 -56884293 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1422 505 283 19 19 chrX 109766214 109766376 -56883920 + L1M1 LINE L1 5487 5648 -652 3 1422 243 267 89 0 chrX 109766388 109766478 -56883818 + L1M1 LINE L1 5797 5894 -406 3 1422 432 200 0 0 chrX 109766505 109766600 -56883696 + (TA)n Simple_repeat Simple_repeat 1 95 0 3 1422 675 315 102 74 chrX 109766829 109767464 -56882832 + L1MDa LINE L1 1186 1838 -4795 3 1422 1261 233 53 99 chrX 109767471 109767904 -56882392 + Lx2B LINE L1 6587 6999 -1 3 1422 730 275 118 26 chrX 109767922 109768490 -56881806 + L1MDa LINE L1 1836 2455 -4178 3 1422 917 218 161 14 chrX 109768497 109768720 -56881576 + MTD LTR MaLR 100 355 -64 3 1422 458 277 14 0 chrX 109768742 109768883 -56881413 - L1M2 LINE L1 -683 5614 5472 3 1422 27 62 0 0 chrX 109769382 109769430 -56880866 + AT_rich Low_complexity Low_complexity 1 48 0 3 1422 1171 199 14 9 chrX 109769464 109769682 -56880614 - Lx6 LINE L1 -9 7451 7233 3 1422 21 57 0 0 chrX 109770772 109770807 -56879489 + AT_rich Low_complexity Low_complexity 1 35 0 3 1422 450 0 0 0 chrX 109773047 109773097 -56877199 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 1422 37 23 0 0 chrX 109773529 109773573 -56876723 + AT_rich Low_complexity Low_complexity 1 44 0 3 1422 373 278 83 53 chrX 109773699 109773832 -56876464 - B1F1 SINE Alu -7 142 6 3 1422 620 280 55 35 chrX 109775072 109775272 -56875024 + B3 SINE B2 2 205 -11 3 1422 531 162 215 45 chrX 109775574 109775743 -56874553 - Lx3B LINE L1 -1 7008 6787 3 1422 1035 234 23 49 chrX 109775946 109776252 -56874044 - Lx7 LINE L1 0 7696 7399 3 1422 282 95 0 0 chrX 109776272 109776314 -56873982 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1422 1142 62 0 0 chrX 109776741 109776887 -56873409 - B1_Mus2 SINE Alu 0 147 2 3 1422 232 235 29 0 chrX 109778192 109778260 -56872036 - Tigger14a DNA MER2_type -136 188 119 3 1422 368 155 0 14 chrX 109779205 109779277 -56871019 + (TA)n Simple_repeat Simple_repeat 2 72 0 3 1422 5468 34 8 3 chrX 109779295 109779947 -56870349 - L1Md_F2 LINE L1 -15 6567 5913 3 1422 1062 100 0 0 chrX 109781114 109781254 -56869042 + B1_Mus1 SINE Alu 1 140 -8 3 1422 273 29 0 0 chrX 109781260 109781294 -56869002 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 3 1422 707 318 60 80 chrX 109781810 109782247 -56868049 + MLT1C LTR MaLR 1 428 -39 3 1422 22 0 0 0 chrX 109782468 109782490 -56867806 + AT_rich Low_complexity Low_complexity 1 22 0 3 1422 25 83 0 0 chrX 109782577 109782637 -56867659 + AT_rich Low_complexity Low_complexity 1 60 0 3 1422 422 256 70 42 chrX 109783562 109783705 -56866591 - B1_Mus2 SINE Alu 0 147 1 3 1422 1149 217 23 171 chrX 109786289 109786728 -56863568 + ORR1D1 LTR MaLR 1 374 0 3 1422 2142 230 40 84 chrX 109786728 109787356 -56862940 + ORR1D1-int LTR MaLR 1 600 -770 3 1422 871 179 33 39 chrX 109787341 109787521 -56862775 + ORR1D1 LTR MaLR 196 374 0 3 1422 611 279 143 42 chrX 109787709 109788162 -56862134 + RLTR12B LTR ERVK 16 500 -27 3 1422 312 71 32 97 chrX 109788299 109788361 -56861935 + URR1B DNA MER1_type 168 225 0 3 1422 351 0 0 0 chrX 109788779 109788818 -56861478 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 1422 938 285 19 81 chrX 109789284 109789593 -56860703 + B4A SINE B4 3 292 0 3 1422 23 54 0 0 chrX 109790490 109790527 -56859769 + AT_rich Low_complexity Low_complexity 1 37 0 3 1422 1092 257 73 42 chrX 109791832 109792136 -56858160 + ORR1D2 LTR MaLR 3 316 -54 3 1422 2228 157 79 13 chrX 109792136 109792532 -56857764 + MTC LTR MaLR 1 420 -1 3 1422 5746 189 40 25 chrX 109792532 109793771 -56856525 + MTC-int LTR MaLR 1 1258 0 3 1422 1911 154 130 34 chrX 109793771 109794155 -56856141 + MTC LTR MaLR 1 421 0 3 1422 292 278 67 42 chrX 109794155 109794218 -56856078 + MTC LTR MaLR 307 369 -1 3 1422 2303 184 18 123 chrX 109794312 109794883 -56855413 + RLTR18B LTR ERVK 2 512 0 3 1422 513 287 0 0 chrX 109795497 109795605 -56854691 + PB1D10 SINE Alu 3 110 -7 3 1422 1159 319 21 3 chrX 109795771 109796107 -56854189 + Lx8 LINE L1 6969 7310 -163 3 1422 227 266 84 105 chrX 109797663 109797730 -56852566 - B4 SINE B4 -147 145 6 3 1422 318 227 40 13 chrX 109797730 109797806 -56852490 - ID4 SINE ID 0 83 6 3 1422 1433 32 5 21 chrX 109798210 109798402 -56851894 + L1Md_F2 LINE L1 6394 6582 0 3 1422 198 0 0 0 chrX 109798481 109798503 -56851793 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 4 1422 302 179 36 0 chrX 109798758 109798814 -56851482 + HAL1-3A_ME LINE L1 1946 2003 -855 4 1422 435 38 0 0 chrX 109798819 109798872 -56851424 + (CATATA)n Simple_repeat Simple_repeat 4 56 0 4 1422 331 355 10 82 chrX 109799011 109799207 -56851089 + MIR3 SINE MIR 16 197 -11 4 1422 3671 5 0 0 chrX 109799272 109799682 -56850614 + L1Md_A LINE L1 6173 6582 0 4 1422 3961 24 11 0 chrX 109799692 109800155 -56850141 - L1Md_F2 LINE L1 -3 6579 6112 4 1422 538 271 144 10 chrX 109801927 109802121 -56848175 - ID_B1 SINE B4 -3 221 2 4 1422 3287 38 2 0 chrX 109802785 109803185 -56847111 + L1Md_F2 LINE L1 6182 6582 0 4 1422 895 88 0 205 chrX 109803196 109803381 -56846915 + B1_Mus1 SINE Alu 2 148 0 4 1422 211 85 0 41 chrX 109803381 109803430 -56846866 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 4 1422 825 79 0 0 chrX 109803479 109803593 -56846703 + (GA)n Simple_repeat Simple_repeat 1 114 0 4 1422 304 376 27 41 chrX 109803630 109803777 -56846519 - ORR1E LTR MaLR -214 145 1 4 1422 1036 95 12 31 chrX 109803852 109804015 -56846281 - B2_Mm2 SINE B2 -32 163 4 4 1422 2291 122 9 0 chrX 109804016 109804361 -56845935 + Lx3_Mus LINE L1 6654 7001 -8 4 1422 733 94 248 0 chrX 109804838 109804955 -56845341 - B1_Mus2 SINE Alu -1 146 1 4 1422 256 266 12 12 chrX 109805069 109805149 -56845147 + GA-rich Low_complexity Low_complexity 3 82 0 4 1422 267 374 0 29 chrX 109805825 109805842 -56844454 - ID_B1 SINE B4 -21 203 105 4 1422 354 318 0 0 chrX 109805842 109805927 -56844369 - B1F1 SINE Alu -41 108 24 4 1422 285 281 78 21 chrX 109806312 109806454 -56843842 - MIR SINE MIR -2 260 111 4 1422 466 209 15 0 chrX 109807509 109807643 -56842653 + CT-rich Low_complexity Low_complexity 1 136 0 4 1422 235 273 15 0 chrX 109810569 109810635 -56839661 + Lx7 LINE L1 7569 7635 -61 4 1422 6585 94 39 8 chrX 109813327 109814589 -56835707 + L1_Mus1 LINE L1 5273 6566 -1 4 1422 29 28 0 0 chrX 109814599 109814635 -56835661 + AT_rich Low_complexity Low_complexity 1 36 0 4 1422 447 19 0 0 chrX 109814785 109814837 -56835459 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1422 884 240 14 0 chrX 109815636 109815844 -56834452 + B3 SINE B2 1 211 -5 4 1422 588 50 0 0 chrX 109816112 109816192 -56834104 + (TG)n Simple_repeat Simple_repeat 2 81 0 4 1422 307 274 59 12 chrX 109816209 109816294 -56834002 - MER21B LTR ERV1 -78 785 697 4 1422 378 355 151 0 chrX 109816318 109816470 -56833826 - MER21B LTR ERV1 -663 200 26 4 1422 429 95 0 0 chrX 109816479 109816542 -56833754 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1422 203 282 76 61 chrX 109816972 109817104 -56833192 + L3 LINE CR1 2796 2929 -1560 4 1422 181 394 61 0 chrX 109818071 109818170 -56832126 + MER5A DNA MER1_type 55 159 -30 4 1422 189 74 0 0 chrX 109818186 109818213 -56832083 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1422 520 245 20 0 chrX 109818213 109818364 -56831932 + L1MD LINE L1 3293 3446 -2700 4 1422 917 199 202 42 chrX 109818671 109818933 -56831363 + ORR1D1 LTR MaLR 5 308 -66 4 1422 5676 172 26 51 chrX 109818933 109819517 -56830779 + Lx2B LINE L1 4725 5286 -591 4 1422 4470 111 34 10 chrX 109819517 109820216 -56830080 + Lx LINE L1 5931 6646 -8 4 1422 8147 139 37 17 chrX 109820216 109821843 -56828453 + Lx2B LINE L1 5287 6955 -45 4 1422 344 231 9 33 chrX 109821844 109821954 -56828342 + ORR1D1 LTR MaLR 283 384 0 4 1422 310 236 142 45 chrX 109821972 109822127 -56828169 + L1MD3 LINE L1 3832 4001 -2145 4 1422 428 158 9 0 chrX 109822143 109822257 -56828039 + (CA)n Simple_repeat Simple_repeat 1 115 0 4 1422 382 274 144 29 chrX 109822258 109822525 -56827771 + L1MD3 LINE L1 4017 4310 -1836 4 1422 1889 280 72 22 chrX 109822774 109823318 -56826978 + MER21B LTR ERV1 274 844 -19 4 1422 509 275 139 93 chrX 109823353 109823706 -56826590 + L1MD3 LINE L1 4375 4717 -1429 4 1422 314 257 0 0 chrX 109823706 109823780 -56826516 + ID4_ SINE ID 1 74 -9 4 1422 509 275 139 93 chrX 109823780 109823894 -56826402 + L1MD3 LINE L1 4718 4832 -1314 4 1422 297 0 0 0 chrX 109823894 109823927 -56826369 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1422 509 275 139 93 chrX 109823927 109824292 -56826004 + L1MD3 LINE L1 4833 5246 -900 4 1422 491 270 33 39 chrX 109824342 109824523 -56825773 + B3A SINE B2 2 181 -17 4 1422 975 302 88 33 chrX 109824552 109825240 -56825056 + L1MD3 LINE L1 5262 5983 -361 4 1422 304 203 62 0 chrX 109825490 109825554 -56824742 - ID4 SINE ID -14 69 2 4 1422 356 264 45 17 chrX 109825573 109825750 -56824546 - L1MEe LINE L1 -3238 3083 2902 4 1422 1015 136 14 26 chrX 109825914 109826165 -56824131 + Lx2 LINE L1 6692 6996 -4 4 1422 250 250 0 0 chrX 109826292 109826344 -56823952 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1422 26 30 0 0 chrX 109826419 109826452 -56823844 + AT_rich Low_complexity Low_complexity 1 33 0 4 1422 2884 269 42 33 chrX 109826458 109827284 -56823012 - Lx8 LINE L1 -171 7302 6469 4 1422 378 0 0 0 chrX 109827370 109827412 -56822884 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1422 1997 180 67 25 chrX 109827424 109827828 -56822468 + MTC LTR MaLR 1 421 0 4 1422 1295 111 5 16 chrX 109827936 109828128 -56822168 - ORR1A4 LTR MaLR 0 329 140 4 1422 457 324 68 14 chrX 109828193 109828412 -56821884 - L1MEe LINE L1 -4597 1744 1514 4 1422 735 36 27 0 chrX 109828642 109828753 -56821543 + L1Md_F3 LINE L1 6470 6583 -1 4 1422 229 278 21 53 chrX 109829047 109829142 -56821154 - L1MEe LINE L1 -5928 580 489 4 1422 525 135 10 0 chrX 109829253 109829349 -56820947 + ORR1A2 LTR MaLR 1 97 -230 4 1422 1807 127 10 3 chrX 109829349 109829641 -56820655 + Lx LINE L1 6360 6653 -1 4 1422 288 36 17 67 chrX 109829645 109829705 -56820591 + (CAAAA)n Simple_repeat Simple_repeat 4 60 0 4 1422 1748 77 9 0 chrX 109829711 109829944 -56820352 + ORR1A2 LTR MaLR 93 327 0 4 1422 457 331 155 6 chrX 109829944 109830260 -56820036 - L1MEe LINE L1 -6144 364 2 4 1422 458 415 23 11 chrX 109830602 109830868 -56819428 - B4A SINE B4 -2 290 22 4 1422 281 231 63 13 chrX 109830987 109831066 -56819230 + L1MC1 LINE L1 3637 3719 -2427 4 1422 255 31 0 0 chrX 109831164 109831196 -56819100 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1422 519 17 0 0 chrX 109831196 109831255 -56819041 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 1422 1731 277 130 27 chrX 109831409 109832002 -56818294 + Lx8 LINE L1 6574 7227 -246 4 1422 1340 246 52 24 chrX 109832178 109832716 -56817580 + L1MC1 LINE L1 4320 4872 -1274 4 1422 4334 49 0 2 chrX 109832920 109833452 -56816844 + L1Md_F2 LINE L1 6040 6570 -12 4 1422 1359 271 67 40 chrX 109833612 109834696 -56815600 + L1MC1 LINE L1 4885 5999 -334 4 177 29965 91 7 6 chrX 109834720 109840644 -56809652 - L1_Mus1 LINE L1 0 6567 643 4 1423 498 196 0 0 chrX 109840642 109840739 -56809557 - L1_Mus1 LINE L1 -6133 505 409 4 1423 377 235 110 7 chrX 109840736 109840890 -56809406 + L1MC1 LINE L1 5989 6158 -175 4 1423 30 45 0 0 chrX 109840897 109840941 -56809355 + AT_rich Low_complexity Low_complexity 1 44 0 4 1423 3735 14 121 0 chrX 109841057 109841497 -56808799 + MT2_Mm LTR ERVL 1 493 0 4 1423 45670 16 0 1 chrX 109841497 109846859 -56803437 + MERVL-int LTR ERVL 1 5360 -125 4 1423 390 167 46 35 chrX 109846859 109846946 -56803350 + ORR1A3-int LTR MaLR 553 640 -1323 4 1423 302 0 0 0 chrX 109846946 109846984 -56803312 + MERVL-int LTR ERVL 5448 5485 0 4 1423 3750 11 121 0 chrX 109846984 109847424 -56802872 + MT2_Mm LTR ERVL 1 493 0 4 1423 180 111 0 0 chrX 109847426 109847453 -56802843 + (TA)n Simple_repeat Simple_repeat 1 27 0 4 1423 378 0 0 0 chrX 109847470 109847512 -56802784 + (TC)n Simple_repeat Simple_repeat 1 42 0 4 1423 195 42 0 0 chrX 109847514 109847538 -56802758 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1423 4053 81 0 21 chrX 109847594 109848162 -56802134 + L1Md_F2 LINE L1 6026 6581 -1 4 1423 556 199 11 60 chrX 109848209 109848366 -56801930 - ORR1D1 LTR MaLR -221 157 6 4 1423 753 316 0 5 chrX 109848367 109848583 -56801713 - MTE2b LTR MaLR 0 379 165 4 1423 8558 136 17 18 chrX 109848635 109850264 -56800032 - Lx3C LINE L1 -3 6973 5369 4 1423 3807 56 80 6 chrX 109850264 109850763 -56799533 - L1_Mus2 LINE L1 -2 6564 6029 4 1423 8558 119 18 29 chrX 109850763 109851685 -56798611 - Lx3C LINE L1 -518 5368 4437 4 1423 247 149 0 0 chrX 109851684 109851731 -56798565 + L1_Mur1 LINE L1 3238 3284 -2602 4 1423 212 376 0 23 chrX 109851954 109852041 -56798255 + PB1 SINE Alu 37 121 -6 4 1423 23 33 0 0 chrX 109852125 109852155 -56798141 + AT_rich Low_complexity Low_complexity 1 30 0 4 1423 956 246 20 83 chrX 109852708 109853107 -56797189 + Lx7 LINE L1 4542 4915 -965 4 1423 531 176 0 32 chrX 109853112 109853206 -56797090 - B3 SINE B2 -115 101 11 4 1423 3144 240 26 46 chrX 109853242 109854224 -56796072 + Lx7 LINE L1 4908 5870 -10 4 1423 918 266 47 11 chrX 109854289 109854563 -56795733 + Lx7 LINE L1 6254 6537 -1159 4 1423 884 301 57 28 chrX 109854580 109854932 -56795364 - Lx7 LINE L1 -874 6822 6461 4 1423 6197 6 0 0 chrX 109855003 109855686 -56794610 - L1Md_T LINE L1 0 6582 5900 4 1423 2948 27 0 0 chrX 109855686 109856023 -56794273 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1423 52421 24 18 7 chrX 109856023 109862427 -56787869 - IAPEz-int LTR ERVK 0 6481 8 4 1423 2948 27 0 0 chrX 109862427 109862764 -56787532 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1423 4902 20 0 0 chrX 109862786 109863377 -56786919 - L1_Mm LINE L1 0 5883 5293 4 1423 1590 220 119 9 chrX 109863787 109864223 -56786073 - Lx2B LINE L1 -1 6999 6516 4 1423 256 277 0 0 chrX 109864226 109864309 -56785987 - L1M3 LINE L1 -772 5519 5437 4 1423 555 299 54 0 chrX 109864392 109864559 -56785737 - B4A SINE B4 0 292 117 4 1423 389 216 257 23 chrX 109864626 109864844 -56785452 - L1M3 LINE L1 -851 5440 5166 4 1423 1470 73 5 0 chrX 109865054 109865246 -56785050 - B2_Mm1t SINE B2 0 193 1 4 1423 684 297 73 81 chrX 109865320 109865375 -56784921 - MTEa LTR MaLR 0 379 325 4 1423 627 14 0 0 chrX 109865375 109865447 -56784849 + (GGAA)n Simple_repeat Simple_repeat 3 74 0 4 1423 684 297 73 81 chrX 109865447 109865772 -56784524 - MTEa LTR MaLR -55 324 3 4 1423 9327 78 27 14 chrX 109866120 109868177 -56782119 - Lx3_Mus LINE L1 -8 7001 4919 4 1423 186 43 0 0 chrX 109868177 109868200 -56782096 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 4 1423 9327 65 22 5 chrX 109868200 109868581 -56781715 - Lx3_Mus LINE L1 -968 4918 4543 4 1423 221 242 180 10 chrX 109870005 109870105 -56780191 + L2 LINE L2 2296 2412 -1007 4 1423 441 0 0 0 chrX 109870170 109870219 -56780077 + (TAA)n Simple_repeat Simple_repeat 2 50 0 4 1423 659 306 23 0 chrX 109870464 109870637 -56779659 + MLT1B LTR MaLR 206 382 -8 4 1423 1413 302 95 49 chrX 109870663 109871046 -56779250 - MLT1E3 LTR MaLR -9 615 197 4 1423 2016 167 188 62 chrX 109871046 109871659 -56778637 - RMER6C LTR ERVK 0 690 1 4 1423 1413 302 95 49 chrX 109871659 109871863 -56778433 - MLT1E3 LTR MaLR -428 196 1 4 1423 529 269 66 15 chrX 109872015 109872151 -56778145 - B1_Mur1 SINE Alu -6 143 1 4 1423 381 328 80 21 chrX 109872176 109872363 -56777933 + L2 LINE L2 2261 2458 -961 4 1423 1699 98 12 0 chrX 109872494 109872749 -56777547 - L1_Mus3 LINE L1 0 6638 6381 4 1423 224 234 86 51 chrX 109872844 109872961 -56777335 + L2 LINE L2 2559 2679 -740 4 1423 345 218 64 0 chrX 109872961 109873039 -56777257 - BC1_Mm scRNA scRNA -65 87 5 4 1423 1422 284 6 6 chrX 109873395 109873738 -56776558 + Lx6 LINE L1 6941 7283 -177 4 1423 32 0 0 0 chrX 109874242 109874274 -56776022 + AT_rich Low_complexity Low_complexity 1 32 0 4 1423 302 169 15 0 chrX 109874339 109874404 -56775892 + CT-rich Low_complexity Low_complexity 3 68 0 5 1423 2375 316 40 24 chrX 109874423 109875413 -56774883 - Lx7 LINE L1 -396 7300 6295 5 1423 234 271 0 0 chrX 109875606 109875691 -56774605 + (CA)n Simple_repeat Simple_repeat 2 86 0 5 1423 451 281 12 6 chrX 109876012 109876173 -56774123 - L1MD LINE L1 -423 5819 5658 5 1423 1047 199 19 5 chrX 109876324 109876531 -56773765 - URR1A DNA MER1_type 0 226 17 5 1423 274 246 18 0 chrX 109876532 109876589 -56773707 - ORR1C2 LTR MaLR -326 58 1 5 1423 268 264 14 0 chrX 109876797 109876869 -56773427 + Lx9 LINE L1 7218 7290 -354 5 1423 33583 77 11 12 chrX 109877120 109883476 -56766820 - L1Md_F3 LINE L1 0 6584 238 5 1423 245 321 146 19 chrX 109883726 109883939 -56766357 - L1MD2 LINE L1 -6293 254 15 5 1423 254 359 16 71 chrX 109884404 109884530 -56765766 + PB1D7 SINE Alu 2 120 0 5 1423 212 345 33 16 chrX 109884961 109885082 -56765214 + L2a LINE L2 3304 3426 0 5 1423 323 302 22 82 chrX 109885458 109885498 -56764798 + CYRA11_Mm Unknown Y-chromosome 140 312 -305 5 1423 771 175 0 7 chrX 109885498 109885642 -56764654 - URR1B DNA MER1_type 0 225 83 5 1423 478 323 19 6 chrX 109886132 109886291 -56764005 - RSINE1 SINE B4 -2 163 3 5 1423 2342 168 2 21 chrX 109886334 109886765 -56763531 - Lx LINE L1 -3 6651 6229 5 1423 22 70 0 0 chrX 109887490 109887533 -56762763 + AT_rich Low_complexity Low_complexity 1 43 0 5 1423 4600 147 10 1 chrX 109887818 109889004 -56761292 - Lx LINE L1 -362 6292 5094 5 1423 1988 58 4 11 chrX 109889004 109889265 -56761031 - L1Md_F2 LINE L1 -1 6581 6323 5 1423 4486 165 18 1 chrX 109889265 109889283 -56761013 - Lx LINE L1 -790 5093 5076 5 1423 335 362 17 0 chrX 109889425 109889541 -56760755 - PB1 SINE Alu -3 124 7 5 1423 946 249 67 21 chrX 109889984 109890357 -56759939 - L1MB7 LINE L1 -190 5994 5605 5 1423 360 210 14 0 chrX 109890434 109890529 -56759767 - L1MB7 LINE L1 -575 5609 5514 5 1423 602 279 33 11 chrX 109890593 109890865 -56759431 - L1M2 LINE L1 -963 5180 4903 5 1423 2235 79 0 0 chrX 109891477 109891768 -56758528 + L1_Mus1 LINE L1 6274 6564 -3 5 1423 474 18 0 0 chrX 109891811 109891866 -56758430 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 5 1423 483 18 0 0 chrX 109892909 109892965 -56757331 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1423 543 31 0 0 chrX 109892965 109893029 -56757267 + (GA)n Simple_repeat Simple_repeat 1 65 0 5 1423 235 314 0 0 chrX 109893322 109893392 -56756904 + Tigger16b DNA Tigger 163 232 -105 5 1423 254 36 34 68 chrX 109893520 109893579 -56756717 + L1_Mus4 LINE L1 6579 6635 -1 5 1423 353 314 83 25 chrX 109894163 109894489 -56755807 - Lx9 LINE L1 -46 7598 7254 5 1423 610 307 5 51 chrX 109894514 109894730 -56755566 - Lx9 LINE L1 -451 7193 6988 5 1423 7106 161 74 23 chrX 109894719 109896223 -56754073 + L1_Mur3 LINE L1 3002 4581 -1299 5 1423 297 0 0 0 chrX 109896223 109896256 -56754040 + (TC)n Simple_repeat Simple_repeat 2 34 0 5 1423 684 229 0 0 chrX 109896256 109896422 -56753874 + (TA)n Simple_repeat Simple_repeat 2 167 0 5 1423 1951 226 132 6 chrX 109896475 109896983 -56753313 + Lx6 LINE L1 6184 6755 -705 5 1423 1131 108 0 0 chrX 109896988 109897145 -56753151 + B2_Mm2 SINE B2 2 158 -37 5 1423 381 43 0 0 chrX 109897146 109897193 -56753103 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 5 1423 2096 243 76 17 chrX 109897198 109897857 -56752439 + Lx6 LINE L1 6746 7696 0 5 1423 28394 110 22 42 chrX 109897964 109902476 -56747820 + L1_Mus3 LINE L1 426 4924 -959 5 1423 245 262 47 28 chrX 109902476 109902582 -56747714 - MER72B LTR ERV1 -381 387 280 5 1423 28394 110 22 42 chrX 109902582 109902891 -56747405 + L1_Mus3 LINE L1 4925 5234 -649 5 1423 270 0 0 0 chrX 109902891 109902921 -56747375 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 1423 28394 111 17 22 chrX 109902921 109904314 -56745982 + L1_Mus3 LINE L1 5235 6638 0 5 1423 951 154 207 0 chrX 109905885 109906054 -56744242 + B3 SINE B2 1 204 -12 5 1423 1353 326 38 6 chrX 109906477 109906946 -56743350 + MER67A LTR ERV1 60 543 0 5 1423 533 281 15 0 chrX 109907291 109907426 -56742870 + B1F SINE Alu 5 141 -8 5 1423 438 246 204 0 chrX 109907614 109907805 -56742491 - Lx9 LINE L1 -27 7617 7388 5 1423 691 259 76 14 chrX 109910205 109910407 -56739889 + B3A SINE B2 1 200 -16 5 1423 567 43 0 0 chrX 109910409 109910479 -56739817 + (CA)n Simple_repeat Simple_repeat 2 71 0 5 1423 486 217 40 40 chrX 109910500 109910625 -56739671 + B1_Mur1 SINE Alu 23 147 -2 5 1423 1032 243 31 15 chrX 109910709 109910814 -56739482 - L1_Mur3 LINE L1 -6536 1176 1033 5 1423 466 70 47 0 chrX 109910814 109910900 -56739396 + (TCTCTG)n Simple_repeat Simple_repeat 6 95 0 5 1423 1032 240 26 13 chrX 109910900 109911125 -56739171 - L1_Mur3 LINE L1 -6615 1097 869 5 1423 770 191 29 7 chrX 109911940 109912077 -56738219 - B3 SINE B2 -76 140 1 5 1423 401 369 104 16 chrX 109912106 109912240 -56738056 - Lx7 LINE L1 -487 7209 7074 5 1423 189 74 0 0 chrX 109912240 109912267 -56738029 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1423 401 369 104 16 chrX 109912267 109912515 -56737781 - Lx7 LINE L1 -623 7073 6795 5 1423 186 271 0 0 chrX 109913584 109913632 -56736664 + L3 LINE CR1 3878 3925 -564 5 1423 255 344 82 53 chrX 109914009 109914215 -56736081 + L3 LINE CR1 4187 4398 -91 5 1423 24 85 0 0 chrX 109915316 109915375 -56734921 + AT_rich Low_complexity Low_complexity 1 59 0 5 1423 349 294 53 38 chrX 109916678 109916809 -56733487 - B1F1 SINE Alu -4 145 13 5 1423 1347 106 0 10 chrX 109917749 109917958 -56732338 - L1Md_F2 LINE L1 -4 6578 6372 5 1423 708 12 0 0 chrX 109918062 109918143 -56732153 + (TG)n Simple_repeat Simple_repeat 2 82 0 5 1423 24 53 0 0 chrX 109919085 109919123 -56731173 + AT_rich Low_complexity Low_complexity 1 38 0 5 1423 24 0 0 0 chrX 109919160 109919184 -56731112 + AT_rich Low_complexity Low_complexity 1 24 0 5 1423 238 222 16 16 chrX 109919201 109919265 -56731031 - L1M5 LINE L1 -346 5778 5715 5 1423 455 238 65 19 chrX 109919273 109919427 -56730869 + Lx2B LINE L1 6833 6993 -7 5 1423 496 342 65 35 chrX 109919510 109919710 -56730586 - MER58A DNA MER1_type -18 206 1 5 1423 957 263 68 43 chrX 109919983 109920261 -56730035 - Lx9 LINE L1 -453 7191 6907 5 1423 793 263 32 0 chrX 109920289 109920479 -56729817 + B3 SINE B2 3 198 -18 5 1423 447 250 61 20 chrX 109920499 109920646 -56729650 + L1_Rod LINE L1 5401 5553 -294 5 1423 1952 129 3 13 chrX 109920720 109921034 -56729262 - Lx LINE L1 -12 6642 6332 5 1423 201 185 0 0 chrX 109922941 109923006 -56727290 + CT-rich Low_complexity Low_complexity 2 66 0 5 1423 633 14 0 0 chrX 109923021 109923095 -56727201 + (TG)n Simple_repeat Simple_repeat 1 74 0 5 1423 406 282 0 25 chrX 109923142 109923262 -56727034 - PB1D9 SINE Alu -1 119 3 5 1423 33540 88 10 5 chrX 109925231 109931431 -56718865 - L1Md_F2 LINE L1 0 6582 348 5 1423 379 354 40 20 chrX 109932596 109932795 -56717501 - MIRb SINE MIR -26 242 40 5 1423 414 330 9 9 chrX 109933189 109933305 -56716991 + PB1 SINE Alu 9 124 -3 5 1423 513 178 109 8 chrX 109934147 109934266 -56716030 + RMER1C Other Other 896 1026 -316 5 1423 1053 24 0 0 chrX 109934513 109934637 -56715659 + (TC)n Simple_repeat Simple_repeat 1 124 0 5 1423 495 220 35 52 chrX 109934637 109934752 -56715544 + B1_Mus1 SINE Alu 15 127 -21 5 1423 4449 97 3 2 chrX 109934833 109935456 -56714840 + L1_Mus3 LINE L1 6011 6634 -4 5 1423 996 159 0 0 chrX 109936385 109936561 -56713735 + (TCTCTG)n Simple_repeat Simple_repeat 1 176 0 5 1423 24 0 0 0 chrX 109937068 109937092 -56713204 + AT_rich Low_complexity Low_complexity 1 24 0 5 1423 248 294 41 68 chrX 109937365 109937511 -56712785 + L2c LINE L2 3246 3387 0 5 1423 303 192 15 44 chrX 109937513 109937649 -56712647 + GA-rich Low_complexity Low_complexity 3 134 0 5 1423 280 75 0 0 chrX 109937852 109938054 -56712242 + L1Md_F2 LINE L1 6523 6582 0 5 1423 992 254 33 26 chrX 109938080 109938408 -56711888 - Lx2B LINE L1 -147 6853 6302 5 1423 2207 136 0 3 chrX 109938479 109938825 -56711471 + Lx3A LINE L1 6634 6978 -3 5 1423 21 0 0 0 chrX 109939036 109939057 -56711239 + AT_rich Low_complexity Low_complexity 1 21 0 5 1423 21 0 0 0 chrX 109939149 109939170 -56711126 + AT_rich Low_complexity Low_complexity 1 21 0 5 1423 2250 201 75 11 chrX 109939520 109939998 -56710298 + Lx5 LINE L1 6542 7050 0 5 1423 508 116 32 0 chrX 109940521 109940616 -56709680 + L1_Mus2 LINE L1 6467 6564 -2 5 1423 666 311 48 57 chrX 109940941 109941503 -56708793 - L1MA7 LINE L1 -40 6251 5695 5 1423 839 140 7 20 chrX 109941555 109941701 -56708595 - B1_Mur3 SINE Alu -2 147 4 5 1423 399 230 20 100 chrX 109941701 109941733 -56708563 - MT2B LTR ERVL -441 160 141 5 1423 670 306 19 4 chrX 109941735 109942001 -56708295 - L1MA7 LINE L1 -715 5576 5307 5 1423 9065 111 57 4 chrX 109942393 109944190 -56706106 - L1_Mus3 LINE L1 -337 6301 4404 5 1423 3592 39 0 2 chrX 109945752 109946188 -56704108 - L1Md_A LINE L1 0 6582 6148 5 1423 1179 29 0 0 chrX 109946188 109946324 -56703972 + L1Md_T LINE L1 6019 6154 -428 5 1423 516 244 112 6 chrX 109946629 109946798 -56703498 - Charlie23a DNA MER1_type -70 269 83 5 1423 10024 111 18 11 chrX 109947090 109947887 -56702409 + L1_Mm LINE L1 1286 2082 -3801 5 1423 246 32 0 0 chrX 109947887 109947918 -56702378 + (CAA)n Simple_repeat Simple_repeat 3 33 0 5 1423 10024 111 18 11 chrX 109947918 109948718 -56701578 + L1_Mm LINE L1 2083 2893 -2990 5 1423 5178 96 12 3 chrX 109948714 109949467 -56700829 + L1_Mm LINE L1 4538 5297 -586 5 1423 2496 103 65 5 chrX 109949469 109949851 -56700445 + L1_Mus2 LINE L1 6161 6565 -1 5 1423 704 327 4 83 chrX 109949902 109950132 -56700164 + B4A SINE B4 79 290 -2 5 1423 393 39 0 0 chrX 109950174 109950225 -56700071 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1423 3237 269 55 44 chrX 109950852 109951871 -56698425 + Lx7 LINE L1 6144 7173 -523 5 1423 29 0 0 0 chrX 109951943 109951972 -56698324 + AT_rich Low_complexity Low_complexity 1 29 0 5 1423 789 290 10 5 chrX 109951972 109952180 -56698116 - B3 SINE B2 0 216 8 5 1423 462 108 0 0 chrX 109952234 109952308 -56697988 + (TG)n Simple_repeat Simple_repeat 1 74 0 5 1423 401 138 12 0 chrX 109952308 109952388 -56697908 + (GA)n Simple_repeat Simple_repeat 2 82 0 6 1423 240 163 0 0 chrX 109952464 109952513 -56697783 + Lx8 LINE L1 7423 7471 -2 6 1423 3535 174 98 75 chrX 109952544 109953727 -56696569 + Lx3_Mus LINE L1 209 1426 -4460 6 1423 35184 36 2 0 chrX 109953728 109959119 -56691177 + L1Md_T LINE L1 92 5589 -297 6 1423 8940 5 0 3 chrX 109959119 109960118 -56690178 + L1Md_T LINE L1 5590 6585 0 6 1423 981 79 20 0 chrX 109960121 109960273 -56690023 + Lx3_Mus LINE L1 1408 1562 -4324 6 1423 28139 136 19 24 chrX 109960274 109964509 -56685787 + L1_Mus1 LINE L1 218 4430 -1453 6 1423 942 157 0 0 chrX 109964509 109964656 -56685640 + B1_Mm SINE Alu 1 147 0 6 1423 28139 101 6 11 chrX 109964656 109966682 -56683614 + L1_Mus1 LINE L1 4431 6449 -118 6 1423 10739 91 15 6 chrX 109966696 109968250 -56682046 + Lx3_Mus LINE L1 3720 5286 -600 6 177 8550 22 0 1 chrX 109968263 109969419 -56680877 - L1Md_T LINE L1 -1 6581 5427 6 1424 9114 98 21 22 chrX 109969420 109971157 -56679139 + Lx3_Mus LINE L1 5278 7008 -1 6 1424 1574 260 150 39 chrX 109971217 109971499 -56678797 + Lx6 LINE L1 6851 7158 -302 6 1424 221 0 0 33 chrX 109971499 109971529 -56678767 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 1424 1107 73 0 0 chrX 109971529 109971666 -56678630 - B1_Mm SINE Alu -9 138 2 6 1424 1574 260 150 39 chrX 109971666 109971890 -56678406 + Lx6 LINE L1 7159 7413 -47 6 1424 454 371 50 23 chrX 109971910 109972169 -56678127 + B4A SINE B4 27 292 0 6 1424 873 194 0 0 chrX 109972668 109972848 -56677448 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 1424 416 262 29 0 chrX 109972964 109973067 -56677229 + MIRb SINE MIR 158 263 -5 6 1424 1188 97 51 6 chrX 109974718 109974895 -56675401 + B2_Mm2 SINE B2 2 186 -9 6 1424 3542 62 63 16 chrX 109975266 109975760 -56674536 - L1Md_F2 LINE L1 -12 6570 6054 6 1424 180 318 212 0 chrX 109975776 109975861 -56674435 - MIRb SINE MIR -59 209 107 6 1424 702 274 26 0 chrX 109976068 109976258 -56674038 - B3A SINE B2 -2 196 2 6 1424 882 306 96 9 chrX 109976278 109976601 -56673695 - Lx6 LINE L1 -85 7375 7025 6 1424 26698 103 59 9 chrX 109977037 109981641 -56668655 + L1_Mus1 LINE L1 405 5294 -589 6 1424 1141 61 14 0 chrX 109981641 109981789 -56668507 + B1_Mur4 SINE Alu 1 150 0 6 1424 26698 100 20 3 chrX 109981789 109983067 -56667229 + L1_Mus1 LINE L1 5295 6566 -1 6 1424 1283 83 28 0 chrX 109983320 109983500 -56666796 - B2_Mm1t SINE B2 -7 186 2 6 1424 464 340 33 33 chrX 109983797 109984010 -56666286 + MIR SINE MIR 49 261 -1 6 1424 252 0 0 0 chrX 109984149 109984177 -56666119 + (TC)n Simple_repeat Simple_repeat 2 29 0 6 1424 423 0 0 0 chrX 109984177 109984223 -56666073 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1424 812 270 69 5 chrX 109984232 109984448 -56665848 - B4 SINE B4 -62 230 1 6 1424 4502 109 9 1 chrX 109984682 109985332 -56664964 + Lx LINE L1 6000 6654 0 6 1424 221 283 50 0 chrX 109985599 109985659 -56664637 + MIR3 SINE MIR 92 154 -54 6 1424 549 0 0 0 chrX 109986326 109986387 -56663909 + (TC)n Simple_repeat Simple_repeat 2 62 0 6 1424 594 0 0 0 chrX 109986387 109986452 -56663844 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 1424 718 109 74 7 chrX 109986753 109986901 -56663395 - RMER17B LTR ERVK -498 460 303 6 1424 424 303 132 2 chrX 109986988 109987158 -56663138 - MIR3 SINE MIR -23 185 2 6 1424 4829 244 28 98 chrX 109991806 109992657 -56657639 + L1_Mur3 LINE L1 544 1328 -6400 6 1424 2305 185 111 8 chrX 109992657 109993136 -56657160 + RLTR24 LTR ERV1 1 528 -1 6 1424 4829 167 53 48 chrX 109993136 109993880 -56656416 + L1_Mur3 LINE L1 1329 2061 -3819 6 1424 411 98 0 0 chrX 109993880 109993941 -56656355 + (CA)n Simple_repeat Simple_repeat 1 61 0 6 1424 4829 167 53 48 chrX 109993941 109994228 -56656068 + L1_Mur3 LINE L1 2062 2361 -3519 6 1424 2334 94 11 26 chrX 109994228 109994578 -56655718 + L1Md_F2 LINE L1 6238 6582 0 6 1424 6067 228 50 26 chrX 109994580 109994917 -56655379 + Lx6 LINE L1 6050 6388 -1072 6 1424 1149 107 66 22 chrX 109994917 109995098 -56655198 - B2_Mm2 SINE B2 -6 189 1 6 1424 6067 228 50 26 chrX 109995098 109996138 -56654158 + Lx6 LINE L1 6389 7460 0 6 1424 665 145 15 22 chrX 109996236 109996370 -56653926 + Lx4A LINE L1 6926 7058 0 6 1424 24 32 0 0 chrX 109996370 109996401 -56653895 + AT_rich Low_complexity Low_complexity 1 31 0 6 1424 26 0 0 0 chrX 109996457 109996483 -56653813 + AT_rich Low_complexity Low_complexity 1 26 0 6 1424 286 380 23 35 chrX 109996632 109996804 -56653492 - Lx8 LINE L1 -170 7303 7134 6 1424 365 205 53 18 chrX 109997065 109997179 -56653117 - Lx6 LINE L1 -17 7443 7326 6 1424 839 189 7 7 chrX 109997192 109997336 -56652960 + B1_Mur4 SINE Alu 2 145 -5 6 1424 235 367 0 0 chrX 109997346 109997444 -56652852 + CT-rich Low_complexity Low_complexity 1 98 0 6 1424 1014 33 0 0 chrX 109997472 109997594 -56652702 + (TCTCCC)n Simple_repeat Simple_repeat 3 124 0 6 1424 30 0 0 0 chrX 109997626 109997656 -56652640 + AT_rich Low_complexity Low_complexity 1 30 0 6 1424 198 0 0 0 chrX 109997664 109997686 -56652610 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 6 1424 589 236 31 0 chrX 109997793 109997920 -56652376 - Lx8 LINE L1 -388 7085 6955 6 1424 607 232 47 18 chrX 109998395 109998566 -56651730 - L1_Mur3 LINE L1 -1822 4058 3883 6 1424 1918 184 25 25 chrX 109998566 109998933 -56651363 + ORR1B2 LTR MaLR 1 367 0 6 1424 5481 175 42 7 chrX 109998933 110000000 -56650296 + ORR1B2-int LTR MaLR 1 1105 -404 6 1424 2515 152 0 7 chrX 110000001 110000405 -56649891 + ORR1B2-int LTR MaLR 1107 1507 -2 1 1424 2204 135 29 0 chrX 110000407 110000756 -56649540 + ORR1B2 LTR MaLR 1 359 -8 1 1424 648 215 77 11 chrX 110000759 110000942 -56649354 - L1_Mur3 LINE L1 -1992 3888 3694 2 1424 547 287 56 43 chrX 110000923 110001247 -56649049 + L1M2 LINE L1 4421 4748 -1395 3 1424 241 317 47 28 chrX 110001261 110001368 -56648928 + L1M2 LINE L1 4809 4917 -1226 3 1424 258 200 28 0 chrX 110001519 110001596 -56648700 + L1M2 LINE L1 5189 5269 -871 3 1424 2151 90 0 13 chrX 110001651 110001967 -56648329 - MusHAL1 LINE L1 -1230 1482 1171 4 1424 7432 140 14 21 chrX 110001964 110002532 -56647764 + L1_Mus4 LINE L1 5098 5677 -206 5 1424 342 0 0 0 chrX 110002532 110002570 -56647726 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 6 1424 7432 92 5 20 chrX 110002570 110002581 -56647715 + L1_Mus4 LINE L1 5678 5678 -958 5 1424 1080 78 0 7 chrX 110002581 110002736 -56647560 - L1Md_F2 LINE L1 -11 6571 6418 7 1424 7432 92 5 20 chrX 110002736 110003691 -56646605 + L1_Mus4 LINE L1 5678 6629 -7 5 1424 230 160 20 0 chrX 110003747 110003797 -56646499 + G-rich Low_complexity Low_complexity 2 52 0 8 1424 7969 160 33 30 chrX 110003983 110005450 -56644846 + Lx4B LINE L1 5587 7057 -1 9 1424 1956 227 14 62 chrX 110005511 110006061 -56644235 + Lx7 LINE L1 7173 7696 0 1 1424 884 264 95 17 chrX 110006079 110006437 -56643859 + L1M2 LINE L1 5368 5753 -538 3 1424 1836 156 35 86 chrX 110006440 110006812 -56643484 + ORR1B1 LTR MaLR 41 393 -1 1 1424 3765 67 22 6 chrX 110006837 110007332 -56642964 + L1Md_F2 LINE L1 6066 6568 -14 1 1424 369 0 0 0 chrX 110007343 110007384 -56642912 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1424 369 109 0 0 chrX 110007384 110007439 -56642857 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1424 1490 237 22 12 chrX 110007440 110007760 -56642536 - MTD LTR MaLR -94 325 3 1 1424 646 261 5 55 chrX 110007816 110008015 -56642281 - Lx9 LINE L1 -354 7290 7102 1 1424 5005 129 3 9 chrX 110008211 110008995 -56641301 - Lx2 LINE L1 0 6997 6219 1 1424 1721 106 69 0 chrX 110008995 110009270 -56641026 + Lx2 LINE L1 5891 6184 -813 1 1424 6755 39 10 0 chrX 110009298 110010098 -56640198 + RLTR13C2 LTR ERVK 1 808 0 1 1424 476 278 60 30 chrX 110010368 110010568 -56639728 - Charlie4a DNA MER1_type -230 278 73 1 1424 279 0 0 0 chrX 110012438 110012469 -56637827 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1424 189 171 0 0 chrX 110013304 110013339 -56636957 + (CATA)n Simple_repeat Simple_repeat 4 38 0 2 1424 3783 113 13 3 chrX 110014438 110015071 -56635225 - L1_Mur1 LINE L1 -2207 3679 3041 2 1424 7685 108 5 20 chrX 110015071 110016236 -56634060 + Lx3B LINE L1 5821 6968 -5 2 1424 49 32 0 0 chrX 110016237 110016300 -56633996 + AT_rich Low_complexity Low_complexity 1 63 0 2 1424 261 0 0 0 chrX 110016409 110016438 -56633858 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1424 300 53 0 0 chrX 110017372 110017410 -56632886 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2 1424 23 68 0 0 chrX 110017525 110017569 -56632727 + AT_rich Low_complexity Low_complexity 1 44 0 2 1424 506 177 56 8 chrX 110017702 110017827 -56632469 - Lx9 LINE L1 -1 7643 7513 2 1424 1938 73 8 26 chrX 110017953 110018220 -56632076 - L1_Mus1 LINE L1 -43 6524 6263 2 1424 573 197 50 176 chrX 110018218 110018299 -56631997 + Lx9 LINE L1 6736 6826 -818 3 1424 1160 68 7 0 chrX 110018299 110018446 -56631850 + B1_Mus1 SINE Alu 1 148 0 3 1424 573 197 50 176 chrX 110018446 110018586 -56631710 + Lx9 LINE L1 6827 6929 -715 3 1424 860 278 58 32 chrX 110018582 110018924 -56631372 - L1_Mur3 LINE L1 -1157 4723 4373 3 1424 390 284 54 92 chrX 110018939 110019307 -56630989 - L1M3d LINE L1 -2431 4313 3960 3 1424 693 254 63 40 chrX 110019606 110019905 -56630391 - L1_Rod LINE L1 -3915 1932 1627 3 1424 682 109 8 8 chrX 110019908 110020028 -56630268 + (TG)n Simple_repeat Simple_repeat 2 121 0 3 1424 417 350 34 0 chrX 110020052 110020169 -56630127 - B3A SINE B2 -71 127 7 3 1424 696 246 123 4 chrX 110020631 110020900 -56629396 + L1_Rod LINE L1 343 643 -6529 3 1424 1055 222 19 10 chrX 110021112 110021317 -56628979 - B3 SINE B2 -2 214 8 3 1424 25 65 0 0 chrX 110021527 110021573 -56628723 + AT_rich Low_complexity Low_complexity 1 46 0 3 1424 267 333 23 11 chrX 110021705 110021720 -56628576 - ID_B1 SINE B4 -59 165 109 4 1424 292 197 30 90 chrX 110021720 110021787 -56628509 - B1_Mur3 SINE Alu -85 64 2 4 1424 639 69 10 19 chrX 110021825 110021929 -56628367 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 4 1424 405 183 82 35 chrX 110021929 110022004 -56628292 - B1_Mur4 SINE Alu -7 143 62 4 1424 240 331 68 39 chrX 110022017 110022297 -56627999 - L1M3d LINE L1 -4524 2144 1857 3 1424 22 35 0 0 chrX 110022350 110022379 -56627917 + AT_rich Low_complexity Low_complexity 1 29 0 4 1424 232 306 19 0 chrX 110022391 110022499 -56627797 - L1M3d LINE L1 -5212 1395 1286 3 1424 1085 246 51 165 chrX 110023146 110023619 -56626677 - MTD LTR MaLR 0 419 1 4 1424 4206 51 2 14 chrX 110023709 110024227 -56626069 + LTRIS3 LTR ERV1 1 512 0 4 1424 227 241 148 26 chrX 110024392 110024507 -56625789 + L1_Mur2 LINE L1 1652 1780 -4106 4 1424 5507 126 20 13 chrX 110024734 110026052 -56624244 + L1_Mur2 LINE L1 1203 3170 -744 4 1424 17013 144 37 26 chrX 110026040 110028244 -56622052 + L1_Mur2 LINE L1 2456 4663 -1214 4 1424 189 74 0 0 chrX 110028244 110028271 -56622025 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 4 1424 17013 144 37 26 chrX 110028271 110029041 -56621255 + L1_Mur2 LINE L1 4664 5439 -438 4 1424 5415 122 24 8 chrX 110029041 110029903 -56620393 + Lx3A LINE L1 6100 6975 -6 4 1424 17013 144 37 26 chrX 110029903 110030122 -56620174 + L1_Mur2 LINE L1 5440 5686 -191 4 1424 291 186 359 14 chrX 110030117 110030259 -56620037 + Lx5 LINE L1 6855 7045 -5 5 1424 714 316 126 6 chrX 110030328 110030803 -56619493 + L1_Rod LINE L1 1822 2353 -3494 5 1424 1165 238 56 88 chrX 110030803 110031180 -56619116 - MTE2b LTR MaLR -9 370 6 5 1424 651 312 35 19 chrX 110031181 110031498 -56618798 + L1M2 LINE L1 2328 2649 -3231 5 1424 518 253 65 79 chrX 110031526 110031741 -56618555 - RMER15 LTR ERVL -17 558 347 5 1424 2582 71 56 3 chrX 110031924 110032264 -56618032 - RLTR10D LTR ERVK 0 359 2 5 1424 705 208 69 30 chrX 110032407 110032610 -56617686 + Lx4B LINE L1 6841 7051 -7 5 1424 3421 20 5 0 chrX 110032927 110033321 -56616975 - MTA_Mm LTR MaLR 0 396 1 5 1424 9206 28 3 1 chrX 110033321 110034417 -56615879 - MTA_Mm-int LTR MaLR 0 1098 1 5 1424 3421 20 5 0 chrX 110034417 110034811 -56615485 - MTA_Mm LTR MaLR 0 396 1 5 1424 2405 305 81 14 chrX 110035780 110035978 -56614318 + L1M2 LINE L1 3294 3559 -2584 5 1424 531 0 0 0 chrX 110035978 110036037 -56614259 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 5 1424 2405 289 65 16 chrX 110036037 110037122 -56613174 + L1M2 LINE L1 3560 4700 -1443 5 1424 429 294 118 59 chrX 110037390 110037458 -56612838 + RSINE1 SINE B4 3 72 -93 5 1424 3297 51 7 0 chrX 110037458 110037870 -56612426 + L1Md_F2 LINE L1 6167 6581 -1 6 1424 429 294 118 59 chrX 110037870 110037953 -56612343 + RSINE1 SINE B4 73 162 -3 5 1424 535 311 7 0 chrX 110038081 110038229 -56612067 - Lx8 LINE L1 -135 7338 7190 6 1424 243 0 0 0 chrX 110039825 110039852 -56610444 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 1424 1084 70 7 0 chrX 110040424 110040567 -56609729 + B1_Mus2 SINE Alu 1 144 -3 6 1424 432 0 0 0 chrX 110040567 110040615 -56609681 + (CATA)n Simple_repeat Simple_repeat 2 49 0 6 1424 303 209 66 0 chrX 110041236 110041327 -56608969 - Lx9 LINE L1 -40 7604 7508 6 1424 3297 68 7 0 chrX 110041297 110041722 -56608574 - L1Md_F2 LINE L1 -238 6344 5917 6 1424 268 164 0 0 chrX 110041713 110041780 -56608516 + L1Md_F2 LINE L1 6516 6582 0 6 1424 1348 164 64 4 chrX 110041819 110042083 -56608213 - Lx9 LINE L1 -148 7496 7217 6 1424 442 248 75 44 chrX 110042097 110042316 -56607980 - L1MA5 LINE L1 -195 6105 5865 6 1424 1076 289 106 46 chrX 110042606 110042940 -56607356 + MTD LTR MaLR 1 358 -61 6 1424 1724 193 74 19 chrX 110042940 110043304 -56606992 - ORR1C2 LTR MaLR 0 384 1 7 1424 1076 289 106 46 chrX 110043304 110043364 -56606932 + MTD LTR MaLR 359 419 0 6 1424 356 323 45 23 chrX 110043364 110043497 -56606799 + MIRb SINE MIR 93 228 -40 7 1424 431 300 71 32 chrX 110043505 110043660 -56606636 - MER2B DNA MER2_type 0 336 176 7 1424 361 333 0 0 chrX 110043889 110043985 -56606311 - B1F SINE Alu -49 100 5 7 1424 1382 241 79 0 chrX 110044057 110044385 -56605911 - ORR1D1 LTR MaLR -20 354 1 7 1424 269 360 85 24 chrX 110044449 110044653 -56605643 + MIRb SINE MIR 1 226 -42 7 1424 401 375 105 54 chrX 110046379 110046931 -56603365 - LTR85b LTR Gypsy? -12 772 193 7 1424 515 309 33 45 chrX 110046936 110047180 -56603116 - MLT1B LTR MaLR -34 356 116 7 1424 3982 166 53 4 chrX 110047286 110048001 -56602295 - Lx5 LINE L1 -5 7045 6296 7 1424 1415 231 47 40 chrX 110048222 110048669 -56601627 - Lx7 LINE L1 0 7696 7247 7 1424 10689 86 21 4 chrX 110048670 110050301 -56599995 + MusHAL1 LINE L1 43 1701 -1011 8 1424 1396 134 5 0 chrX 110050299 110050380 -56599916 + L1_Mur2 LINE L1 4646 4726 -1151 8 1424 441 0 0 0 chrX 110050380 110050429 -56599867 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 8 1424 1396 134 5 0 chrX 110050429 110050571 -56599725 + L1_Mur2 LINE L1 4727 4868 -1009 8 1424 28 48 0 0 chrX 110050599 110050641 -56599655 + AT_rich Low_complexity Low_complexity 1 42 0 8 1424 37264 45 7 1 chrX 110051128 110056489 -56593807 - L1Md_F3 LINE L1 0 6584 1194 8 1424 8656 82 7 1 chrX 110056494 110058409 -56591887 + L1_Mus1 LINE L1 4639 6565 -2 8 1424 261 305 133 55 chrX 110058788 110059059 -56591237 - L2 LINE L2 -552 2867 2576 8 1424 671 336 111 51 chrX 110059286 110059854 -56590442 + L2 LINE L2 1851 2452 -967 8 1424 872 136 48 54 chrX 110059916 110060102 -56590194 - B2_Mm2 SINE B2 -9 186 2 8 1424 22 0 0 0 chrX 110060104 110060126 -56590170 + AT_rich Low_complexity Low_complexity 1 22 0 8 1424 865 140 23 17 chrX 110060166 110060340 -56589956 - Lx LINE L1 -6 6648 6474 9 1424 2731 108 19 63 chrX 110060412 110060886 -56589410 + RLTR11B LTR ERVK 1 453 0 9 1424 384 77 0 0 chrX 110061084 110061136 -56589160 + (TC)n Simple_repeat Simple_repeat 1 52 0 9 1424 245 27 54 0 chrX 110061550 110061587 -56588709 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 9 1424 581 294 22 28 chrX 110061626 110061808 -56588488 - MER99 DNA hAT? -201 630 450 9 1424 519 295 155 28 chrX 110061906 110062157 -56588139 + MTD LTR MaLR 13 295 -124 9 1424 2022 133 69 21 chrX 110062171 110062546 -56587750 - ORR1B1 LTR MaLR 0 394 2 9 1424 2174 216 63 21 chrX 110062558 110063069 -56587227 + L1_Mur3 LINE L1 172 703 -7025 9 1424 839 147 6 0 chrX 110063071 110063227 -56587069 + L1_Mur3 LINE L1 4270 4426 -1454 9 1424 205 292 40 96 chrX 110064928 110065053 -56585243 + MIR SINE MIR 132 249 -13 9 1424 1950 169 95 68 chrX 110065176 110065793 -56584503 + RMER6C LTR ERVK 1 672 -18 9 1424 180 102 61 0 chrX 110065894 110065943 -56584353 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1424 581 131 8 0 chrX 110066259 110066389 -56583907 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 1 1424 202 302 84 108 chrX 110066529 110066696 -56583600 + L2 LINE L2 2695 2857 -562 1 1424 287 318 81 65 chrX 110066801 110066986 -56583310 - Charlie16a DNA MER1_type -95 247 60 1 1424 1496 163 54 3 chrX 110067283 110067578 -56582718 + L1_Mur2 LINE L1 5026 5335 -542 1 1424 644 35 0 23 chrX 110069127 110069215 -56581081 + (GGA)n Simple_repeat Simple_repeat 3 88 0 1 1424 6685 111 33 1 chrX 110069215 110070222 -56580074 + Lx2 LINE L1 5959 6997 0 1 1424 1601 216 147 13 chrX 110070524 110070959 -56579337 - MT2A LTR ERVL -28 573 1 1 1424 538 231 0 0 chrX 110071502 110071593 -56578703 - B3A SINE B2 -70 128 38 1 1424 451 250 95 54 chrX 110071620 110071861 -56578435 + Lx7 LINE L1 7250 7500 -196 1 1424 23 33 0 0 chrX 110071963 110071993 -56578303 + AT_rich Low_complexity Low_complexity 1 30 0 1 1424 28 0 0 0 chrX 110072591 110072619 -56577677 + AT_rich Low_complexity Low_complexity 1 28 0 1 1424 237 143 71 0 chrX 110072619 110072661 -56577635 - B3 SINE B2 -171 45 1 1 1424 29 0 0 0 chrX 110072697 110072726 -56577570 + AT_rich Low_complexity Low_complexity 1 29 0 1 1424 13498 22 0 0 chrX 110072727 110074994 -56575302 - L1Md_T LINE L1 -1 6581 4316 1 1424 1036 77 19 44 chrX 110075071 110075251 -56575045 - Lx5 LINE L1 -1660 5800 5632 1 1424 2386 98 137 10 chrX 110075251 110075652 -56574644 - RLTR44E LTR ERVK 0 452 1 1 1424 639 184 0 0 chrX 110075653 110075762 -56574534 - Lx5 LINE L1 -246 5631 5523 1 1424 609 224 59 28 chrX 110075762 110075955 -56574341 - RLTR11B LTR ERVK -37 491 284 1 1424 729 248 38 80 chrX 110075962 110076287 -56574009 - RLTR11B LTR ERVK -179 349 11 1 1424 538 136 0 43 chrX 110076296 110076388 -56573908 - L1_Mur2 LINE L1 -349 5528 5441 1 1424 16438 122 31 12 chrX 110076385 110078628 -56571668 - L1Md_F2 LINE L1 -12 6570 4311 1 1424 324 0 0 0 chrX 110078628 110078664 -56571632 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 1424 16438 179 39 20 chrX 110078664 110080603 -56569693 - L1Md_F2 LINE L1 -1570 4310 2301 1 1424 912 276 103 84 chrX 110081647 110081849 -56568447 - L1MA9 LINE L1 -415 5897 5717 1 1424 1594 91 0 76 chrX 110081849 110082098 -56568198 - L1_Mus2 LINE L1 -1 6565 6336 1 1424 1628 271 95 41 chrX 110082098 110083162 -56567134 - L1MA9 LINE L1 -596 5716 4553 1 1424 686 368 76 6 chrX 110083162 110083490 -56566806 - ORR1E LTR MaLR 0 359 9 1 1424 279 248 33 25 chrX 110085319 110085439 -56564857 + L1MA8 LINE L1 6004 6124 -167 1 1424 1182 106 33 6 chrX 110086174 110086354 -56563942 - B2_Mm1a SINE B2 -8 185 1 1 1424 8976 89 5 3 chrX 110086363 110088344 -56561952 - L1_Mus4 LINE L1 0 6566 4583 1 1424 347 121 0 0 chrX 110088346 110088412 -56561884 + L1_Mus4 LINE L1 6565 6630 -6 1 1424 3049 180 100 4 chrX 110088428 110089271 -56561025 + L1_Mur2 LINE L1 1108 2049 -3828 1 1424 299 121 0 67 chrX 110089291 110089380 -56560916 + CT-rich Low_complexity Low_complexity 2 84 0 1 1424 378 0 0 0 chrX 110089381 110089423 -56560873 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1424 7167 129 14 19 chrX 110089423 110089951 -56560345 + L1_Mur2 LINE L1 3777 4288 -1589 1 1424 3124 120 56 49 chrX 110089951 110090504 -56559792 + RLTR31B_Mm LTR ERVK 1 557 0 1 1424 7167 129 14 19 chrX 110090504 110090938 -56559358 + L1_Mur2 LINE L1 4289 4728 -1149 1 1424 180 0 0 0 chrX 110090938 110090958 -56559338 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1424 7167 129 14 19 chrX 110090958 110091220 -56559076 + L1_Mur2 LINE L1 4729 4995 -882 1 1424 798 231 75 56 chrX 110091219 110091485 -56558811 + Lx5 LINE L1 6780 7050 0 1 1424 225 0 0 0 chrX 110092027 110092052 -56558244 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1424 468 0 0 0 chrX 110092220 110092272 -56558024 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 1 1424 28 0 0 0 chrX 110094410 110094438 -56555858 + AT_rich Low_complexity Low_complexity 1 28 0 1 1424 228 365 0 0 chrX 110094730 110094804 -56555492 + L1MC4 LINE L1 6816 6889 -1153 1 1424 228 175 17 17 chrX 110095125 110095183 -56555113 + L1MC4 LINE L1 7262 7319 -723 1 1424 21 82 0 0 chrX 110095546 110095595 -56554701 + AT_rich Low_complexity Low_complexity 1 49 0 1 1424 1411 332 47 32 chrX 110095647 110096245 -56554051 + Lx8 LINE L1 6658 7264 -209 1 1424 234 333 0 0 chrX 110096246 110096306 -56553990 + RMER15 LTR ERVL 403 462 -113 1 1424 424 301 32 16 chrX 110096777 110096902 -56553394 + B1F SINE Alu 14 140 -9 1 1424 936 47 85 0 chrX 110096925 110097054 -56553242 + B1_Mus1 SINE Alu 8 147 -1 1 1424 564 246 0 0 chrX 110097057 110097167 -56553129 + B1F2 SINE Alu 28 137 -12 1 1424 586 338 47 34 chrX 110097343 110097665 -56552631 + MLT1B LTR MaLR 59 384 -6 1 1424 396 40 0 0 chrX 110097738 110097788 -56552508 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1424 397 200 189 0 chrX 110097827 110097922 -56552374 - RSINE1 SINE B4 -39 126 14 1 1424 250 279 74 25 chrX 110099229 110099310 -56550986 - MIRc SINE MIR -89 179 95 1 22 3408 23 5 0 chrX 110100186 110100580 -56549716 - MTA_Mm LTR MaLR 0 396 1 1 1425 8304 68 6 2 chrX 110100580 110101673 -56548623 - MTA_Mm-int LTR MaLR 0 1098 1 1 1425 3429 18 5 2 chrX 110101673 110102068 -56548228 - MTA_Mm LTR MaLR 0 396 1 1 1425 239 327 71 0 chrX 110102347 110102460 -56547836 - MLT1I LTR MaLR -6 405 285 1 1425 396 171 289 6 chrX 110102548 110102635 -56547661 + Lx9 LINE L1 7441 7550 -94 1 1425 459 0 0 0 chrX 110102635 110102686 -56547610 + (GA)n Simple_repeat Simple_repeat 1 51 0 1 1425 396 171 289 6 chrX 110102686 110102757 -56547539 + Lx9 LINE L1 7551 7644 0 1 1425 199 314 0 14 chrX 110103194 110103265 -56547031 + MIR SINE MIR 88 157 -105 1 1425 217 196 22 0 chrX 110103533 110103579 -56546717 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 1425 253 232 58 0 chrX 110103955 110104024 -56546272 + Lx9 LINE L1 7411 7483 -161 1 1425 795 160 0 0 chrX 110104409 110104528 -56545768 - B1_Mus1 SINE Alu -28 120 2 1 1425 411 229 9 87 chrX 110104426 110104541 -56545755 - MT2B LTR ERVL -344 257 152 1 1425 357 24 0 0 chrX 110105558 110105600 -56544696 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1425 782 281 44 38 chrX 110106209 110106549 -56543747 + L1MA6 LINE L1 5957 6298 -2 1 1425 29 0 0 0 chrX 110106602 110106631 -56543665 + AT_rich Low_complexity Low_complexity 1 29 0 1 1425 1005 237 88 58 chrX 110107213 110107590 -56542706 - Lx6 LINE L1 -11 7449 7062 1 1425 285 79 0 0 chrX 110107637 110107675 -56542621 - L1Md_F2 LINE L1 -401 6181 6144 1 1425 2464 38 57 3 chrX 110107675 110107989 -56542307 + L1Md_F2 LINE L1 6241 6571 -11 1 1425 405 134 73 0 chrX 110107989 110108071 -56542225 - L1_Mur3 LINE L1 -1060 4820 4733 1 1425 576 255 103 36 chrX 110108199 110108423 -56541873 - L1MA4 LINE L1 -295 6005 5767 1 1425 30 27 0 0 chrX 110108423 110108460 -56541836 + AT_rich Low_complexity Low_complexity 1 37 0 1 1425 674 24 0 12 chrX 110108608 110108693 -56541603 + (TCTA)n Simple_repeat Simple_repeat 3 86 0 1 1425 396 0 0 0 chrX 110108694 110108738 -56541558 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1425 9415 68 1 7 chrX 110108954 110110955 -56539341 - L1Md_F2 LINE L1 -1 6581 4589 1 1425 2542 164 100 0 chrX 110110985 110111425 -56538871 - RMER1B Other Other -11 1055 572 1 1425 214 191 109 16 chrX 110111811 110111875 -56538421 - B1F1 SINE Alu -67 82 13 1 1425 732 215 0 0 chrX 110111926 110112061 -56538235 + B1_Mur4 SINE Alu 14 148 -2 1 1425 1126 95 53 12 chrX 110112125 110112295 -56538001 + B2_Mm2 SINE B2 5 181 -14 1 1425 812 108 8 0 chrX 110112310 110112440 -56537856 + (GAAAA)n Simple_repeat Simple_repeat 3 133 0 1 1425 536 384 52 28 chrX 110112440 110112762 -56537534 + LTR16B2 LTR ERVL 36 366 -96 1 1425 2550 142 33 24 chrX 110112810 110113236 -56537060 - RLTR23 LTR ERV1 0 430 1 1 1425 512 302 8 0 chrX 110113702 110113831 -56536465 - ID_B1 SINE B4 -2 222 93 1 1425 602 323 6 12 chrX 110113850 110114013 -56536283 - RSINE1 SINE B4 -1 164 3 1 1425 597 350 21 21 chrX 110114013 110114243 -56536053 - B4A SINE B4 -62 230 1 1 1425 299 329 0 12 chrX 110114250 110114330 -56535966 - ID SINE ID -141 83 5 1 1425 540 0 0 0 chrX 110115584 110115644 -56534652 + (TC)n Simple_repeat Simple_repeat 2 61 0 1 1425 369 0 0 0 chrX 110115644 110115684 -56534612 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1425 1907 165 7 80 chrX 110115776 110116190 -56534106 + ORR1C2 LTR MaLR 1 384 0 1 1425 271 264 69 0 chrX 110116998 110117085 -56533211 + L1M5 LINE L1 5734 5826 -298 1 1425 1214 248 26 53 chrX 110117162 110117541 -56532755 - ORR1D2 LTR MaLR -1 369 1 1 1425 23 54 0 0 chrX 110117654 110117691 -56532605 + AT_rich Low_complexity Low_complexity 1 37 0 1 1425 258 221 0 42 chrX 110118477 110118548 -56531748 - Charlie8 DNA MER1_type -2259 169 102 1 1425 28 0 0 0 chrX 110118617 110118645 -56531651 + AT_rich Low_complexity Low_complexity 1 28 0 1 1425 369 202 130 9 chrX 110118656 110118771 -56531525 - L1MB4 LINE L1 -5 6175 6047 1 1425 752 273 100 0 chrX 110119085 110119356 -56530940 - Lx7 LINE L1 -1794 5902 5605 1 1425 616 259 30 126 chrX 110119355 110119605 -56530691 + Lx7 LINE L1 5187 5475 -816 1 1425 1165 75 0 0 chrX 110119605 110119752 -56530544 + B1_Mus1 SINE Alu 2 148 0 1 1425 616 256 30 128 chrX 110119752 110119912 -56530384 + L1_Mur3 LINE L1 5476 5594 -850 1 1425 398 317 60 11 chrX 110119913 110120095 -56530201 + Lx9 LINE L1 6769 6959 -685 1 1425 959 277 64 29 chrX 110120096 110120408 -56529888 - Lx9 LINE L1 -795 6849 6527 1 1425 24 0 0 0 chrX 110120467 110120491 -56529805 + AT_rich Low_complexity Low_complexity 1 24 0 1 1425 200 93 45 23 chrX 110121637 110121681 -56528615 + (TTATA)n Simple_repeat Simple_repeat 4 48 0 1 1425 4554 142 32 82 chrX 110122950 110123369 -56526927 + MusHAL1 LINE L1 1504 1932 -780 1 1425 1113 50 14 0 chrX 110123369 110123510 -56526786 + B1_Mm SINE Alu 5 147 0 1 1425 4554 142 32 82 chrX 110123510 110124066 -56526230 + MusHAL1 LINE L1 1933 2430 -282 1 1425 7094 153 8 6 chrX 110124069 110125303 -56524993 + L1_Mur2 LINE L1 4045 5281 -596 1 1425 364 327 13 38 chrX 110125303 110125462 -56524834 + MER102a DNA MER1_type 33 187 -143 1 1425 192 40 0 0 chrX 110125698 110125723 -56524573 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1 1425 766 225 22 0 chrX 110125738 110125876 -56524420 - RSINE1 SINE B4 -22 143 3 1 1425 333 321 83 35 chrX 110126357 110126502 -56523794 - RSINE1 SINE B4 -8 157 6 1 1425 2702 289 106 17 chrX 110126522 110127544 -56522752 - Lx9 LINE L1 0 7644 6532 1 1425 237 176 169 39 chrX 110127571 110127648 -56522648 - Lx9 LINE L1 -1166 6478 6392 1 1425 2964 62 13 8 chrX 110128198 110128585 -56521711 + L1_Mus1 LINE L1 6179 6567 0 1 1425 227 275 0 0 chrX 110128610 110128690 -56521606 + L1M3 LINE L1 5025 5104 -1036 2 1425 1540 107 8 4 chrX 110128880 110129123 -56521173 - Lx2 LINE L1 0 6997 6754 2 1425 1981 125 66 0 chrX 110129124 110129429 -56520867 + Lx2 LINE L1 6443 6767 -230 2 1425 386 366 0 0 chrX 110129427 110129561 -56520735 - Lx8 LINE L1 -168 7305 7172 2 1425 304 215 119 18 chrX 110129558 110129667 -56520629 + L1MB4 LINE L1 6048 6167 -13 2 1425 261 59 0 0 chrX 110129778 110129812 -56520484 - L1Md_F3 LINE L1 -644 5938 5905 2 1425 5515 36 5 1 chrX 110129812 110130476 -56519820 + L1Md_F3 LINE L1 5919 6584 0 2 1425 3137 90 2 0 chrX 110130661 110131094 -56519202 - Lx2 LINE L1 -898 6099 5666 2 1425 670 210 56 0 chrX 110131088 110131125 -56519171 + Lx2 LINE L1 6116 6152 -845 2 1425 270 0 0 0 chrX 110131125 110131155 -56519141 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1425 670 210 56 0 chrX 110131155 110131260 -56519036 + Lx2 LINE L1 6153 6264 -733 2 1425 374 295 126 33 chrX 110131380 110131562 -56518734 - L1M4b LINE L1 -1065 5941 5743 2 1425 2054 144 9 3 chrX 110131577 110131904 -56518392 - ORR1A4 LTR MaLR 0 329 1 2 1425 324 305 124 6 chrX 110131910 110132088 -56518208 - L1M4b LINE L1 -1325 5681 5483 2 1425 25 0 0 0 chrX 110132100 110132125 -56518171 + AT_rich Low_complexity Low_complexity 1 25 0 2 1425 1014 73 0 0 chrX 110132211 110132347 -56517949 + (TA)n Simple_repeat Simple_repeat 1 136 0 2 1425 2473 258 43 21 chrX 110132348 110133108 -56517188 - Lx9 LINE L1 -170 7474 6698 2 1425 292 227 197 0 chrX 110133248 110133380 -56516916 - L1M4b LINE L1 -1513 5493 5336 2 1425 2935 246 109 21 chrX 110133381 110134173 -56516123 + Lx6 LINE L1 6544 7404 -56 2 1425 368 298 188 12 chrX 110134269 110134339 -56515957 - L1M4b LINE L1 -1724 5282 5215 2 1425 306 0 0 0 chrX 110134339 110134373 -56515923 + (TTA)n Simple_repeat Simple_repeat 1 34 0 2 1425 368 298 188 12 chrX 110134373 110134638 -56515658 - L1M4b LINE L1 -1792 5214 4890 2 1425 2738 49 5 108 chrX 110134813 110135246 -56515050 + RLTR10 LTR ERVK 1 388 -2 2 1425 260 338 58 32 chrX 110135276 110135432 -56514864 - L1M4b LINE L1 -5075 2027 1868 2 1425 509 278 93 16 chrX 110135532 110135726 -56514570 - Lx8 LINE L1 -5 7468 7260 2 1425 275 312 113 16 chrX 110135724 110136043 -56514253 - L1M4b LINE L1 -5722 1612 1263 2 1425 520 232 13 110 chrX 110136758 110136913 -56513383 + B1_Mur1 SINE Alu 10 149 0 2 1425 295 304 61 46 chrX 110137230 110137361 -56512935 - MER5A DNA MER1_type -22 167 35 2 1425 275 353 90 49 chrX 110137424 110137711 -56512585 + B4 SINE B4 9 281 -11 2 1425 29 0 0 0 chrX 110137731 110137760 -56512536 + AT_rich Low_complexity Low_complexity 1 29 0 2 1425 342 0 0 0 chrX 110138255 110138293 -56512003 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1425 423 0 0 0 chrX 110138293 110138339 -56511957 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 1425 406 302 9 0 chrX 110138358 110138474 -56511822 - PB1D10 SINE Alu 0 117 1 2 1425 329 243 19 28 chrX 110139007 110139113 -56511183 + RMER10B LTR ERVL 271 375 -23 2 1425 21 0 0 0 chrX 110139170 110139191 -56511105 + AT_rich Low_complexity Low_complexity 1 21 0 2 1425 399 127 0 0 chrX 110141321 110141384 -56508912 + (T)n Simple_repeat Simple_repeat 1 63 0 2 1425 22 35 0 0 chrX 110142133 110142162 -56508134 + AT_rich Low_complexity Low_complexity 1 29 0 2 1425 1532 205 65 14 chrX 110143028 110143384 -56506912 - ORR1D1 LTR MaLR 0 374 1 2 1425 3789 209 43 23 chrX 110143384 110144181 -56506115 - ORR1D1-int LTR MaLR 0 1370 558 2 1425 367 132 0 0 chrX 110144525 110144578 -56505718 - ORR1D1 LTR MaLR 0 384 332 2 1425 1769 55 8 4 chrX 110144598 110144833 -56505463 - L1_Mus2 LINE L1 -1 6565 6330 2 1425 1235 71 0 0 chrX 110144833 110144988 -56505308 + L1_Mus2 LINE L1 6158 6312 -254 2 1425 1391 183 136 3 chrX 110144988 110145125 -56505171 - ORR1D1 LTR MaLR -43 341 177 2 1425 516 72 0 0 chrX 110145125 110145194 -56505102 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 2 1425 1391 183 136 3 chrX 110145194 110145357 -56504939 - ORR1D1 LTR MaLR -208 176 2 2 1425 213 228 105 3 chrX 110145431 110145499 -56504797 - MIR SINE MIR -111 151 79 2 1425 7701 57 4 0 chrX 110145510 110146474 -56503822 - L1_Mus1 LINE L1 0 6567 5600 2 1425 586 71 162 10 chrX 110146500 110146599 -56503697 + Lx LINE L1 6540 6653 -1 2 1425 305 317 105 37 chrX 110146615 110146805 -56503491 + L1M4 LINE L1 4682 4884 -1262 2 1425 280 306 130 101 chrX 110146853 110146871 -56503425 + B4 SINE B4 76 217 -75 2 1425 613 275 0 0 chrX 110146871 110146991 -56503305 + B1_Mur1 SINE Alu 21 140 -9 2 1425 336 317 92 37 chrX 110147019 110147321 -56502975 + L1M4 LINE L1 4964 5280 -866 2 1425 213 121 0 0 chrX 110147561 110147594 -56502702 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1425 388 143 30 20 chrX 110147603 110147703 -56502593 + (TA)n Simple_repeat Simple_repeat 2 102 0 2 1425 4678 47 0 0 chrX 110148415 110149024 -56501272 + L1Md_F2 LINE L1 5540 6148 -434 2 1425 830 108 13 33 chrX 110149027 110149180 -56501116 + L1Md_F2 LINE L1 6421 6570 -12 2 1425 445 357 39 29 chrX 110149927 110150132 -56500164 - MIRb SINE MIR -27 241 35 2 1425 1011 272 106 35 chrX 110150231 110150608 -56499688 - Lx8 LINE L1 0 7473 7070 2 1425 228 238 16 132 chrX 110151854 110151975 -56498321 - Lx8 LINE L1 -84 7389 7283 2 1425 296 207 48 24 chrX 110152026 110152110 -56498186 + Lx9 LINE L1 6939 7024 -620 2 1425 282 169 83 17 chrX 110152110 110152170 -56498126 + B1_Mur1 SINE Alu 84 147 -2 2 1425 198 71 0 0 chrX 110152182 110152210 -56498086 + (CCAA)n Simple_repeat Simple_repeat 4 31 0 2 1425 2732 76 129 35 chrX 110152248 110152682 -56497614 - L1Md_F2 LINE L1 -14 6568 6094 2 1425 25 51 0 0 chrX 110154442 110154481 -56495815 + AT_rich Low_complexity Low_complexity 1 39 0 2 1425 198 286 171 67 chrX 110156187 110156292 -56494004 - MIRc SINE MIR -71 197 82 2 1425 589 292 15 51 chrX 110157607 110157802 -56492494 + MER58A DNA MER1_type 27 214 -10 2 1425 279 292 42 0 chrX 110157830 110157902 -56492394 - RSINE1 SINE B4 -36 129 55 2 1425 1135 143 9 31 chrX 110157902 110158125 -56492171 + MusHAL1 LINE L1 112 329 -2383 2 1425 188 0 0 69 chrX 110159524 110159553 -56490743 + (CAAAAA)n Simple_repeat Simple_repeat 6 32 0 2 1425 369 267 132 37 chrX 110159644 110159780 -56490516 + Lx8 LINE L1 6955 7103 -370 2 1425 450 0 0 0 chrX 110159998 110160048 -56490248 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1425 494 323 32 0 chrX 110161325 110161480 -56488816 + RSINE1 SINE B4 4 163 -2 2 1425 416 311 29 97 chrX 110161612 110161890 -56488406 + L1MB8 LINE L1 5902 6160 -18 2 1425 182 353 0 0 chrX 110162147 110162198 -56488098 + L2b LINE L2 3317 3367 -8 2 1425 29 0 0 0 chrX 110162591 110162620 -56487676 + AT_rich Low_complexity Low_complexity 1 29 0 2 1425 843 257 19 24 chrX 110162763 110162974 -56487322 - B3 SINE B2 -6 210 1 2 1425 181 318 56 45 chrX 110164059 110164148 -56486148 + L3 LINE CR1 2131 2220 -2269 2 1425 976 31 0 23 chrX 110166211 110166341 -56483955 + B1_Mus2 SINE Alu 21 147 0 2 1425 537 16 0 0 chrX 110167052 110167114 -56483182 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 1425 1607 184 34 0 chrX 110167605 110167899 -56482397 - Lx3C LINE L1 -147 6829 6526 2 1425 318 144 142 57 chrX 110167906 110168019 -56482277 + Lx3C LINE L1 6866 6996 -4 2 1425 449 264 128 11 chrX 110168343 110168523 -56481773 - B4A SINE B4 -8 284 84 2 1425 252 0 0 0 chrX 110168536 110168564 -56481732 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 2 1425 1092 52 0 0 chrX 110168564 110168698 -56481598 - B1_Mus2 SINE Alu -13 134 1 2 1425 29 60 0 0 chrX 110168953 110169003 -56481293 + AT_rich Low_complexity Low_complexity 1 50 0 2 1425 1072 82 0 14 chrX 110169004 110169152 -56481144 - B1_Mus1 SINE Alu -1 147 2 2 1425 236 295 79 20 chrX 110169745 110169897 -56480399 + Charlie2b DNA MER1_type 2570 2730 -52 2 1425 252 130 0 0 chrX 110170372 110170418 -56479878 + (A)n Simple_repeat Simple_repeat 1 46 0 2 1425 183 286 103 19 chrX 110170545 110170652 -56479644 + MIR SINE MIR 18 133 -75 2 1425 1034 90 119 6 chrX 110170750 110170918 -56479378 + B2_Mm2 SINE B2 1 187 -8 2 1425 337 248 0 56 chrX 110172935 110173042 -56477254 - L1MA5 LINE L1 -23 6277 6177 2 1425 277 186 34 0 chrX 110173055 110173114 -56477182 - L1MA5 LINE L1 -9 6291 6231 2 1425 207 0 0 0 chrX 110173139 110173162 -56477134 + (TA)n Simple_repeat Simple_repeat 2 24 0 2 1425 240 86 0 0 chrX 110173175 110173210 -56477086 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1425 266 169 34 0 chrX 110173403 110173462 -56476834 + (TATG)n Simple_repeat Simple_repeat 1 61 0 2 1425 242 233 96 0 chrX 110173462 110173535 -56476761 + L1MA9 LINE L1 6173 6252 -60 2 1425 303 71 0 0 chrX 110174082 110174124 -56476172 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1425 519 17 0 0 chrX 110174708 110174768 -56475528 + (GA)n Simple_repeat Simple_repeat 1 60 0 2 1425 319 0 0 22 chrX 110175414 110175459 -56474837 + B1_Mm SINE Alu 104 147 0 2 1425 182 408 0 62 chrX 110176253 110176334 -56473962 + MIRb SINE MIR 3 78 -190 2 1425 188 385 132 0 chrX 110176631 110176722 -56473574 - L2c LINE L2 -256 3131 3029 2 1425 1731 277 87 52 chrX 110176834 110177435 -56472861 + Lx7 LINE L1 6056 6677 -1019 2 1425 915 169 44 17 chrX 110177415 110177595 -56472701 + L1_Rod LINE L1 5659 5843 -4 2 1425 367 333 38 0 chrX 110177722 110177854 -56472442 + ORR1E LTR MaLR 1 137 -222 2 1425 452 259 32 58 chrX 110178112 110178268 -56472028 + L1M3 LINE L1 4079 4230 -1910 2 1425 180 0 0 0 chrX 110178400 110178420 -56471876 + (GA)n Simple_repeat Simple_repeat 1 20 0 2 1425 3398 30 2 0 chrX 110179872 110180267 -56470029 + MTA_Mm LTR MaLR 1 396 0 2 1425 301 77 0 0 chrX 110180720 110180759 -56469537 + Lx LINE L1 6191 6229 -425 2 1425 1755 140 60 13 chrX 110180762 110180964 -56469332 + Lx LINE L1 6316 6518 -136 2 1425 189 0 0 0 chrX 110180964 110180985 -56469311 + (TGGG)n Simple_repeat Simple_repeat 1 21 0 2 1425 1755 140 60 13 chrX 110180985 110181100 -56469196 + Lx LINE L1 6519 6648 -6 2 1425 1141 49 14 0 chrX 110181778 110181922 -56468374 - B1_Mm SINE Alu 0 147 2 2 1425 363 280 134 0 chrX 110182978 110183135 -56467161 + L1MA9 LINE L1 6062 6239 -73 2 1425 1695 161 0 3 chrX 110183567 110183859 -56466437 - Lx LINE L1 -886 4997 4707 2 1425 7006 112 33 2 chrX 110183858 110185461 -56464835 + Lx LINE L1 5001 6654 0 2 1425 21 0 0 0 chrX 110186542 110186563 -56463733 + AT_rich Low_complexity Low_complexity 1 21 0 2 1425 976 185 81 108 chrX 110186637 110186934 -56463362 + Lx5 LINE L1 6754 7042 -8 2 1425 258 56 0 0 chrX 110187241 110187277 -56463019 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1425 1190 54 0 0 chrX 110187277 110187425 -56462871 - B1_Mus1 SINE Alu 0 148 1 2 1425 430 326 86 8 chrX 110187710 110188072 -56462224 + L1ME2z LINE L1 6047 6436 -8 2 1425 192 175 186 34 chrX 110188436 110188495 -56461801 - MER5B DNA MER1_type -22 156 89 3 1425 525 249 73 11 chrX 110189654 110189845 -56460451 - L1MA9 LINE L1 -22 6290 6088 3 1425 1135 56 7 0 chrX 110190530 110190673 -56459623 + B1_Mus2 SINE Alu 3 146 -1 3 1425 392 347 22 39 chrX 110191122 110191302 -56458994 - MIRb SINE MIR -84 184 8 3 1425 216 86 0 0 chrX 110192343 110192378 -56457918 + (CAAG)n Simple_repeat Simple_repeat 2 36 0 3 1425 379 361 123 40 chrX 110194231 110194531 -56455765 + L1MEd LINE L1 126 450 -5669 3 1425 1023 270 194 8 chrX 110194871 110195263 -56455033 + MLT1D LTR MaLR 1 465 -40 3 1425 314 208 117 0 chrX 110195804 110195881 -56454415 + MIR SINE MIR 9 94 -168 3 1425 243 0 0 0 chrX 110196213 110196240 -56454056 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1425 608 278 38 65 chrX 110197112 110197297 -56452999 + B3A SINE B2 18 197 -1 3 1425 632 210 109 8 chrX 110198167 110198372 -56451924 + Lx3C LINE L1 6696 6951 -25 3 1425 208 300 208 34 chrX 110199955 110200162 -56450134 + MIRb SINE MIR 18 260 -8 3 1425 232 314 84 42 chrX 110200411 110200554 -56449742 - L2a LINE L2 -5 3421 3273 3 1425 281 401 65 19 chrX 110200621 110200837 -56449459 - L2a LINE L2 -290 3136 2911 3 1425 437 345 6 41 chrX 110200885 110201057 -56449239 + RMER15 LTR ERVL 394 559 -16 3 1425 396 309 71 10 chrX 110202562 110202758 -56447538 - Lx7 LINE L1 -503 5800 5590 3 1425 456 260 15 8 chrX 110202989 110203121 -56447175 - Lx9 LINE L1 -197 7447 7315 3 1425 420 244 32 20 chrX 110203107 110203256 -56447040 - Lx7 LINE L1 -558 5622 5467 3 1425 253 235 29 0 chrX 110203257 110203325 -56446971 + L1M1 LINE L1 5839 5908 -392 3 1425 23 0 0 0 chrX 110203647 110203670 -56446626 + AT_rich Low_complexity Low_complexity 1 23 0 3 1425 519 60 0 0 chrX 110204018 110204085 -56446211 + (TCCC)n Simple_repeat Simple_repeat 1 67 0 3 1425 484 242 104 59 chrX 110204088 110204290 -56446006 - CR1_Mam LINE CR1 -836 1368 1158 3 1425 6919 15 0 0 chrX 110204811 110205603 -56444693 + L1Md_T LINE L1 4795 5586 -297 3 1425 8878 6 0 0 chrX 110205603 110206587 -56443709 + L1Md_T LINE L1 5587 6570 -12 3 1425 282 87 0 0 chrX 110206603 110206649 -56443647 + (A)n Simple_repeat Simple_repeat 1 46 0 3 1425 294 29 0 0 chrX 110206701 110206736 -56443560 + (A)n Simple_repeat Simple_repeat 1 35 0 3 1425 594 191 41 34 chrX 110207097 110207243 -56443053 + B1_Mur2 SINE Alu 2 148 -1 3 1425 283 297 68 43 chrX 110207381 110207543 -56442753 + B4A SINE B4 125 290 -2 3 1425 396 0 0 0 chrX 110209815 110209859 -56440437 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1425 3407 146 19 12 chrX 110210271 110210699 -56439597 - Lx4A LINE L1 -735 6323 5899 3 1425 2848 44 9 0 chrX 110210699 110211042 -56439254 + ORR1A0 LTR MaLR 1 346 0 3 1425 3407 146 19 12 chrX 110211042 110211182 -56439114 - Lx4A LINE L1 -1160 5898 5751 3 1425 4112 157 48 3 chrX 110211182 110211847 -56438449 + Lx4A LINE L1 6304 7000 -58 3 1425 219 36 0 0 chrX 110211847 110211875 -56438421 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 1425 4112 157 48 3 chrX 110211875 110211931 -56438365 + Lx4A LINE L1 7001 7057 -1 3 1425 21 57 0 0 chrX 110211931 110211966 -56438330 + AT_rich Low_complexity Low_complexity 1 35 0 3 1425 4975 58 12 5 chrX 110212347 110212990 -56437306 + L1Md_F2 LINE L1 5921 6568 -14 3 1425 198 253 25 74 chrX 110213030 110213111 -56437185 - MIRb SINE MIR -32 236 160 3 1425 26 30 0 0 chrX 110213260 110213293 -56437003 + AT_rich Low_complexity Low_complexity 1 33 0 3 1425 449 341 113 16 chrX 110213755 110214011 -56436285 - B4A SINE B4 -10 282 2 3 1425 369 256 49 0 chrX 110214019 110214101 -56436195 - B4 SINE B4 -204 88 3 3 1425 2431 195 50 52 chrX 110214326 110214900 -56435396 + RMER15 LTR ERVL 3 575 0 3 1425 1017 219 10 5 chrX 110215285 110215487 -56434809 + B3 SINE B2 2 204 -12 3 1425 24 53 0 0 chrX 110215488 110215526 -56434770 + AT_rich Low_complexity Low_complexity 1 38 0 3 1425 542 294 16 16 chrX 110217115 110217243 -56433053 + B1F SINE Alu 1 128 -21 3 1425 385 329 19 51 chrX 110218092 110218249 -56432047 + MER20 DNA MER1_type 64 215 -4 3 1425 229 227 341 8 chrX 110218444 110218573 -56431723 - MIR SINE MIR -49 213 42 3 1425 323 281 58 35 chrX 110218814 110218930 -56431366 - Charlie24 DNA MER1_type 0 2450 2346 3 1425 25 0 0 0 chrX 110220015 110220040 -56430256 + AT_rich Low_complexity Low_complexity 1 25 0 3 1425 521 285 19 19 chrX 110220265 110220426 -56429870 + RSINE1 SINE B4 5 165 0 3 1425 25 0 0 0 chrX 110220450 110220475 -56429821 + AT_rich Low_complexity Low_complexity 1 25 0 3 1425 22 0 0 0 chrX 110220713 110220735 -56429561 + AT_rich Low_complexity Low_complexity 1 22 0 3 1425 310 138 12 18 chrX 110221957 110222012 -56428284 - B1F1 SINE Alu -4 123 57 3 1425 2417 85 19 0 chrX 110222244 110222563 -56427733 - ORR1A2 LTR MaLR -2 325 1 3 1425 583 186 39 44 chrX 110222672 110222852 -56427444 - Lx9 LINE L1 0 7644 7466 3 1425 273 211 18 0 chrX 110222857 110222914 -56427382 + 4.5SRNA scRNA scRNA 10 67 -27 3 1425 259 269 29 15 chrX 110223608 110223676 -56426620 - ID_B1 SINE B4 -5 219 151 3 1425 240 35 0 0 chrX 110225066 110225095 -56425201 + (TAG)n Simple_repeat Simple_repeat 1 29 0 3 1425 25 0 0 0 chrX 110225235 110225260 -56425036 + AT_rich Low_complexity Low_complexity 1 25 0 3 1425 374 260 21 0 chrX 110225306 110225402 -56424894 + Charlie5 DNA MER1_type 19 116 -2508 3 1425 333 0 0 0 chrX 110226381 110226418 -56423878 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1425 27 81 0 0 chrX 110226425 110226487 -56423809 + AT_rich Low_complexity Low_complexity 1 62 0 3 1425 363 336 131 22 chrX 110226502 110226724 -56423572 + MER46C DNA MER2_type 4 249 -89 3 1425 21 57 0 0 chrX 110227186 110227221 -56423075 + AT_rich Low_complexity Low_complexity 1 35 0 3 1425 24 0 0 0 chrX 110227580 110227604 -56422692 + AT_rich Low_complexity Low_complexity 1 24 0 3 1425 6693 31 9 0 chrX 110228205 110229005 -56421291 - L1Md_F3 LINE L1 -2 6582 5776 3 178 36495 35 1 8 chrX 110230355 110235594 -56414702 + L1Md_F2 LINE L1 461 5586 -297 3 1426 8183 41 0 2 chrX 110235594 110236590 -56413706 + L1Md_F2 LINE L1 5587 6580 -2 3 1426 244 333 33 25 chrX 110236670 110236790 -56413506 + MIRb SINE MIR 140 260 -8 3 1426 246 32 0 0 chrX 110236877 110236908 -56413388 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1426 906 74 10 0 chrX 110237412 110237550 -56412746 - B1_Mus1 SINE Alu 0 149 9 3 1426 359 317 51 82 chrX 110237414 110237572 -56412724 - B4A SINE B4 -68 224 72 3 1426 632 276 77 10 chrX 110237732 110237926 -56412370 + ORR1D2 LTR MaLR 3 209 -161 3 1426 9670 45 1 0 chrX 110237926 110239115 -56411181 + L1Md_F2 LINE L1 4397 5586 -297 3 1426 8166 42 0 2 chrX 110239115 110240111 -56410185 + L1Md_F2 LINE L1 5587 6580 -2 3 1426 244 333 33 25 chrX 110240191 110240311 -56409985 + MIRb SINE MIR 140 260 -8 3 1426 246 32 0 0 chrX 110240398 110240429 -56409867 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1426 906 74 10 0 chrX 110240933 110241071 -56409225 - B1_Mus1 SINE Alu 0 149 9 3 1426 359 317 51 82 chrX 110240935 110241093 -56409203 - B4A SINE B4 -68 224 72 3 1426 632 276 77 10 chrX 110241253 110241447 -56408849 + ORR1D2 LTR MaLR 3 209 -161 3 1426 9670 45 1 0 chrX 110241447 110242636 -56407660 + L1Md_F2 LINE L1 4397 5586 -297 3 1426 8183 41 0 2 chrX 110242636 110243632 -56406664 + L1Md_F2 LINE L1 5587 6580 -2 3 1426 244 333 33 25 chrX 110243712 110243832 -56406464 + MIRb SINE MIR 140 260 -8 3 1426 246 32 0 0 chrX 110243919 110243950 -56406346 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1426 906 74 10 0 chrX 110244454 110244592 -56405704 - B1_Mus1 SINE Alu 0 149 9 3 1426 359 317 51 82 chrX 110244456 110244614 -56405682 - B4A SINE B4 -68 224 72 3 1426 632 276 77 10 chrX 110244774 110244968 -56405328 + ORR1D2 LTR MaLR 3 209 -161 3 1426 8853 90 8 2 chrX 110244968 110246216 -56404080 + L1_Mus3 LINE L1 4397 5650 -988 3 1426 181 277 103 44 chrX 110246299 110246367 -56403929 + MIRm SINE MIR 49 120 -156 3 1426 3353 117 125 5 chrX 110246458 110247557 -56402739 + L1_Mur1 LINE L1 211 1703 -4183 3 1426 540 225 8 55 chrX 110250059 110250186 -56400110 + RSINE1 SINE B4 16 136 -29 3 1426 348 24 0 0 chrX 110250194 110250235 -56400061 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1426 1216 54 0 0 chrX 110250284 110250431 -56399865 + B1_Mus2 SINE Alu 1 147 0 3 1426 318 50 0 0 chrX 110250431 110250471 -56399825 + (A)n Simple_repeat Simple_repeat 1 40 0 3 1426 280 172 0 33 chrX 110250660 110250720 -56399576 + PB1D10 SINE Alu 60 117 0 3 1426 412 297 81 39 chrX 110251110 110251428 -56398868 + L1MD LINE L1 4950 5281 -865 3 1426 1429 58 32 0 chrX 110251428 110251616 -56398680 + B2_Mm2 SINE B2 1 194 -1 3 1426 412 297 81 39 chrX 110251616 110251728 -56398568 + L1MD LINE L1 5282 5398 -748 3 1426 356 293 24 31 chrX 110251793 110251828 -56398468 + ID_B1 SINE B4 57 182 -42 3 1426 374 264 0 11 chrX 110251828 110251920 -56398376 + B1F1 SINE Alu 14 104 -45 3 1426 516 274 43 0 chrX 110252016 110252202 -56398094 + L1M2 LINE L1 5127 5320 -823 3 1426 254 216 189 22 chrX 110252208 110252298 -56397998 - L1M1 LINE L1 -694 5609 5505 3 1426 954 222 45 0 chrX 110252320 110252518 -56397778 - B3 SINE B2 -6 210 4 3 1426 847 190 73 53 chrX 110252520 110252726 -56397570 - MTD LTR MaLR -209 210 1 3 1426 677 294 0 28 chrX 110253302 110253484 -56396812 - Lx7 LINE L1 -640 7056 6880 3 1426 340 277 28 78 chrX 110253648 110253789 -56396507 - Kanga2_a DNA Tc2 -327 561 428 3 1426 618 304 178 25 chrX 110254769 110255526 -56394770 + L1ME2z LINE L1 5572 6443 -1 3 1426 210 337 148 20 chrX 110257187 110257396 -56392900 - MIRc SINE MIR -5 263 32 3 1426 275 315 33 11 chrX 110257869 110257959 -56392337 - MIRb SINE MIR -154 114 23 3 1426 236 306 14 0 chrX 110258699 110258771 -56391525 + L2 LINE L2 2327 2399 -1020 3 1426 218 81 27 0 chrX 110258903 110258940 -56391356 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 4 1426 1279 210 113 60 chrX 110259858 110260370 -56389926 - Lx7 LINE L1 0 7696 7158 4 1426 182 91 0 29 chrX 110261273 110261307 -56388989 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 4 1426 999 171 58 65 chrX 110261313 110261588 -56388708 - Lx2B LINE L1 -1 6999 6727 4 1426 216 315 33 23 chrX 110261809 110261900 -56388396 - L2a LINE L2 -1 3425 3306 4 1426 922 163 26 61 chrX 110261954 110262062 -56388234 + L1_Mur3 LINE L1 1434 1536 -4344 4 1426 1098 83 0 0 chrX 110262062 110262206 -56388090 - B1_Mus1 SINE Alu -1 147 4 4 1426 922 163 26 61 chrX 110262206 110262326 -56387970 + L1_Mur3 LINE L1 1537 1654 -4226 4 1426 3461 173 83 11 chrX 110262489 110263149 -56387147 + RMER1B Other Other 359 1066 0 4 1426 526 172 8 8 chrX 110263150 110263267 -56387029 + L1_Mur3 LINE L1 1640 1756 -4124 4 1426 869 171 45 6 chrX 110263267 110263443 -56386853 + URR1B DNA MER1_type 42 224 -1 4 1426 651 190 0 8 chrX 110263445 110263562 -56386734 + L1_Mur3 LINE L1 1753 1868 -4012 4 1426 644 215 69 0 chrX 110263592 110263736 -56386560 + Lx7 LINE L1 7168 7321 -375 4 1426 213 39 0 0 chrX 110263784 110263810 -56386486 + (TTA)n Simple_repeat Simple_repeat 2 27 0 4 1426 206 32 32 0 chrX 110263846 110263877 -56386419 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1426 236 284 51 29 chrX 110263886 110264024 -56386272 + Lx6 LINE L1 7320 7460 0 4 1426 410 258 22 124 chrX 110264129 110264266 -56386030 + B4A SINE B4 1 123 -169 4 1426 303 264 43 60 chrX 110264541 110264658 -56385638 + B1F SINE Alu 33 147 -2 4 1426 732 213 30 190 chrX 110266735 110267066 -56383230 - MTD LTR MaLR -14 405 128 4 1426 643 295 25 17 chrX 110267080 110267321 -56382975 + L1MD2 LINE L1 5400 5642 -600 4 1426 420 146 0 0 chrX 110267343 110267432 -56382864 + (TC)n Simple_repeat Simple_repeat 2 90 0 4 1426 378 0 0 0 chrX 110267439 110267481 -56382815 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1426 272 258 46 91 chrX 110267526 110267601 -56382695 + L1MD2 LINE L1 5730 5802 -557 4 1426 1589 196 33 86 chrX 110267601 110267998 -56382298 - ORR1C1 LTR MaLR -2 376 1 4 1426 272 258 46 91 chrX 110267998 110268097 -56382199 + L1MD2 LINE L1 5803 5896 -463 4 1426 392 263 25 42 chrX 110268214 110268333 -56381963 + PB1D10 SINE Alu 1 117 0 4 1426 330 326 41 81 chrX 110268593 110268683 -56381613 + L1M5 LINE L1 2996 3088 -3058 4 1426 1203 34 7 0 chrX 110268683 110268829 -56381467 + B1_Mus2 SINE Alu 1 147 0 4 1426 330 326 41 81 chrX 110268829 110268844 -56381452 + L1M5 LINE L1 3089 3098 -3048 4 1426 390 69 0 0 chrX 110268844 110268902 -56381394 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 1426 330 326 41 81 chrX 110268902 110268992 -56381304 + L1M5 LINE L1 3099 3184 -2962 4 1426 485 331 44 29 chrX 110269016 110269153 -56381143 + RSINE1 SINE B4 27 165 0 4 1426 25 31 0 0 chrX 110269205 110269237 -56381059 + AT_rich Low_complexity Low_complexity 1 32 0 4 1426 559 311 51 15 chrX 110269256 110269669 -56380627 + L1M2 LINE L1 2191 2615 -3528 4 1426 768 233 50 0 chrX 110269742 110269922 -56380374 + MT2A LTR ERVL 345 533 0 4 1426 1208 295 79 63 chrX 110270001 110270562 -56379734 + L1M2 LINE L1 3686 4294 -1849 4 1426 180 0 0 0 chrX 110270562 110270582 -56379714 + (CAGTA)n Simple_repeat Simple_repeat 4 23 0 4 1426 1208 295 79 63 chrX 110270582 110270711 -56379585 + L1M2 LINE L1 4295 4424 -1719 4 1426 924 176 0 7 chrX 110270711 110270860 -56379436 - B1_Mur4 SINE Alu 0 150 3 4 1426 1208 295 79 63 chrX 110270860 110270924 -56379372 + L1M2 LINE L1 4425 4460 -1683 4 1426 252 276 102 28 chrX 110270924 110271032 -56379264 + PB1D10 SINE Alu 1 116 -1 4 1426 1208 295 79 63 chrX 110271032 110271255 -56379041 + L1M2 LINE L1 4461 4680 -1463 4 1426 1341 178 167 27 chrX 110271289 110271619 -56378677 - MTD LTR MaLR -43 376 1 4 1426 21 0 0 0 chrX 110271925 110271946 -56378350 + AT_rich Low_complexity Low_complexity 1 21 0 4 1426 884 48 165 8 chrX 110272140 110272267 -56378029 + B1_Mm SINE Alu 1 147 0 4 1426 225 0 0 0 chrX 110272267 110272292 -56378004 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1426 2123 59 0 25 chrX 110272421 110272698 -56377598 - L1_Mus1 LINE L1 0 6567 6298 4 1426 32 86 0 0 chrX 110273265 110273346 -56376950 + AT_rich Low_complexity Low_complexity 1 81 0 4 1426 197 33 33 0 chrX 110273710 110273740 -56376556 + (TTATG)n Simple_repeat Simple_repeat 4 34 0 4 1426 31 58 0 0 chrX 110273819 110273871 -56376425 + AT_rich Low_complexity Low_complexity 1 52 0 4 1426 243 0 0 0 chrX 110274174 110274201 -56376095 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1426 369 0 0 0 chrX 110274373 110274414 -56375882 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1426 428 213 102 12 chrX 110275318 110275484 -56374812 - Lx9 LINE L1 -6 7638 7458 4 1426 261 57 0 0 chrX 110275487 110275522 -56374774 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1426 853 242 39 15 chrX 110276268 110276473 -56373823 + B3 SINE B2 1 210 -6 4 1426 3435 171 93 36 chrX 110276656 110277396 -56372900 + RLTR25B LTR ERVK 12 793 -235 4 1426 3131 106 27 60 chrX 110277405 110277760 -56372536 + Lx2 LINE L1 6423 6779 -218 4 1426 2842 33 0 121 chrX 110277760 110278175 -56372121 + RLTR10B2 LTR ERVK 1 365 0 4 1426 3131 106 27 60 chrX 110278175 110278333 -56371963 + Lx2 LINE L1 6780 6919 -78 4 1426 408 94 16 0 chrX 110278335 110278399 -56371897 + RLTR25B LTR ERVK 1039 1103 0 4 1426 753 190 14 7 chrX 110278408 110278546 -56371750 - RSINE1 SINE B4 -21 144 6 4 1426 246 62 0 0 chrX 110278604 110278636 -56371660 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1426 5001 154 56 14 chrX 110278650 110279648 -56370648 + Lx5 LINE L1 5489 6517 -533 4 1426 3395 25 5 0 chrX 110279648 110280042 -56370254 + MTA_Mm LTR MaLR 1 396 0 4 1426 8874 46 6 0 chrX 110280042 110281133 -56369163 + MTA_Mm-int LTR MaLR 1 1098 0 4 1426 3409 23 5 0 chrX 110281133 110281527 -56368769 + MTA_Mm LTR MaLR 1 396 0 4 1426 3606 166 11 23 chrX 110281529 110282176 -56368120 + Lx4A LINE L1 6408 7046 -12 4 1426 357 183 58 0 chrX 110282209 110282329 -56367967 + (TA)n Simple_repeat Simple_repeat 1 127 0 4 1426 24 91 0 0 chrX 110282339 110282405 -56367891 + AT_rich Low_complexity Low_complexity 1 66 0 4 1426 26 0 0 0 chrX 110282465 110282491 -56367805 + AT_rich Low_complexity Low_complexity 1 26 0 4 1426 222 118 0 0 chrX 110283360 110283394 -56366902 + (T)n Simple_repeat Simple_repeat 1 34 0 4 1426 21 36 0 0 chrX 110283823 110283851 -56366445 + AT_rich Low_complexity Low_complexity 1 28 0 4 1426 1271 271 98 76 chrX 110284701 110284774 -56365522 + Lx8 LINE L1 6224 6294 -1179 4 1426 2311 164 54 52 chrX 110284774 110284890 -56365406 + RLTR31_Mm LTR ERVK 1 115 -446 4 1426 981 131 0 17 chrX 110284890 110285069 -56365227 + (GAA)n Simple_repeat Simple_repeat 2 177 0 4 1426 2311 164 54 52 chrX 110285069 110285083 -56365213 + RLTR31_Mm LTR ERVK 116 137 -424 4 1426 249 33 0 0 chrX 110285083 110285113 -56365183 + (CCG)n Simple_repeat Simple_repeat 2 31 0 4 1426 2311 164 54 52 chrX 110285113 110285541 -56364755 + RLTR31_Mm LTR ERVK 138 561 0 4 1426 1271 271 98 76 chrX 110285541 110286018 -56364278 + Lx8 LINE L1 6295 6786 -687 4 1426 1371 75 37 0 chrX 110286218 110286405 -56363891 + B2_Mm2 SINE B2 2 195 0 4 1426 965 206 22 49 chrX 110286477 110286702 -56363594 + MTD LTR MaLR 193 411 -8 4 1426 279 256 14 113 chrX 110286859 110287000 -56363296 + L1MC5 LINE L1 7704 7830 -131 4 1426 882 157 182 25 chrX 110287150 110287392 -56362904 - Lx9 LINE L1 -2 7642 7363 4 1426 243 0 0 0 chrX 110287427 110287454 -56362842 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 4 1426 1369 104 0 5 chrX 110287466 110287659 -56362637 - B2_Mm2 SINE B2 -3 192 1 4 1426 404 301 138 14 chrX 110287684 110287829 -56362467 + RSINE1 SINE B4 3 165 0 4 1426 414 245 19 19 chrX 110288056 110288164 -56362132 - PB1D7 SINE Alu -8 112 5 4 1426 1402 68 0 50 chrX 110288395 110288595 -56361701 + B2_Mm2 SINE B2 1 190 -5 4 1426 367 253 17 56 chrX 110288767 110288947 -56361349 + L1M2 LINE L1 4248 4420 -1723 4 1426 424 182 0 83 chrX 110289169 110289265 -56361031 + B1F2 SINE Alu 31 118 -31 4 1426 1186 267 112 24 chrX 110289287 110289973 -56360323 + L1M2 LINE L1 4456 5198 -945 4 1426 614 223 53 87 chrX 110290050 110290227 -56360069 + L1M2 LINE L1 5189 5352 -948 4 1426 801 131 22 14 chrX 110290227 110290366 -56359930 - B1_Mus2 SINE Alu -7 140 1 4 1426 614 246 101 96 chrX 110290366 110290584 -56359712 + L1M2 LINE L1 5353 5586 -714 4 1426 1198 30 113 51 chrX 110290584 110290761 -56359535 + B2_Mm2 SINE B2 1 188 -7 4 1426 614 246 101 96 chrX 110290761 110290877 -56359419 + L1M2 LINE L1 5587 5692 -608 4 1426 397 227 21 28 chrX 110290901 110291046 -56359250 - Lx6 LINE L1 -26 7434 7291 4 1426 546 256 34 18 chrX 110291061 110291196 -56359100 + L1MA6 LINE L1 5698 5830 -470 4 1426 702 219 108 36 chrX 110291196 110291390 -56358906 + B3 SINE B2 2 209 -7 4 1426 546 259 190 48 chrX 110291390 110291689 -56358607 + L1MA6 LINE L1 5831 6191 -109 4 1426 21 36 0 0 chrX 110293933 110293961 -56356335 + AT_rich Low_complexity Low_complexity 1 28 0 4 1426 2092 112 21 15 chrX 110294355 110294680 -56355616 - ORR1A2 LTR MaLR 0 327 1 4 1426 958 92 43 0 chrX 110294726 110294867 -56355429 + B1_Mm SINE Alu 1 147 0 4 1426 1713 178 6 15 chrX 110295362 110295693 -56354603 + Lx LINE L1 6327 6654 0 4 1426 472 170 19 0 chrX 110295734 110295840 -56354456 + (TA)n Simple_repeat Simple_repeat 1 108 0 4 1426 256 241 52 0 chrX 110295902 110295960 -56354336 + ID4_ SINE ID 3 63 -20 4 1426 24 0 0 0 chrX 110297363 110297387 -56352909 + AT_rich Low_complexity Low_complexity 1 24 0 4 1426 214 301 171 21 chrX 110297816 110298003 -56352293 + MIRb SINE MIR 54 268 0 4 1426 399 127 0 0 chrX 110299601 110299664 -56350632 + (A)n Simple_repeat Simple_repeat 1 63 0 4 1426 358 232 120 10 chrX 110300492 110300592 -56349704 + B3 SINE B2 72 182 -34 4 1426 234 309 146 21 chrX 110300689 110300785 -56349511 - PB1D10 SINE Alu 0 117 10 4 1426 3166 139 95 26 chrX 110301149 110301793 -56348503 - RMER6C LTR ERVK -2 688 1 4 1426 1291 73 39 0 chrX 110302807 110302985 -56347311 + B2_Mm1a SINE B2 1 185 -8 4 1426 208 387 75 6 chrX 110303195 110303369 -56346927 + L2c LINE L2 2457 2642 -777 4 1426 1005 288 10 7 chrX 110303390 110303554 -56346742 - Lx8 LINE L1 -777 6696 6532 4 1426 266 0 29 0 chrX 110303554 110303588 -56346708 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1426 1005 288 10 7 chrX 110303588 110303713 -56346583 - Lx8 LINE L1 -942 6531 6407 4 1426 1738 288 60 69 chrX 110303713 110304466 -56345830 + Lx8 LINE L1 6726 7471 -2 4 1426 205 366 17 84 chrX 110304699 110304878 -56345418 + L2c LINE L2 2964 3130 -257 4 1426 245 365 68 29 chrX 110305642 110305848 -56344448 + MIR SINE MIR 2 215 -47 4 1426 459 351 40 17 chrX 110308541 110308715 -56341581 + MLT1F LTR MaLR 1 178 -370 4 1426 189 0 0 0 chrX 110308717 110308738 -56341558 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 4 1426 1790 256 19 15 chrX 110308748 110309223 -56341073 - Lx3C LINE L1 -26 6950 6474 4 1426 38329 42 3 15 chrX 110309253 110315409 -56334887 - L1Md_A LINE L1 -1 6581 505 4 1426 1835 205 25 39 chrX 110315412 110315854 -56334442 - Lx4B LINE L1 -571 6487 6052 4 1426 2007 164 6 0 chrX 110315853 110316200 -56334096 + L1_Mur2 LINE L1 3899 4247 -1630 4 1426 5591 66 0 3 chrX 110316387 110317115 -56333181 + L1Md_F2 LINE L1 4863 5588 -295 5 1426 7455 66 16 2 chrX 110317117 110318084 -56332212 + L1Md_F2 LINE L1 5591 6571 -11 5 1426 321 89 0 0 chrX 110318428 110318473 -56331823 + (CATA)n Simple_repeat Simple_repeat 4 48 0 5 1426 267 333 54 0 chrX 110318494 110318587 -56331709 + RSINE1 SINE B4 44 141 -24 5 1426 468 0 0 0 chrX 110318594 110318646 -56331650 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1426 537 16 0 0 chrX 110318918 110318980 -56331316 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 5 1426 226 330 110 0 chrX 110319090 110319190 -56331106 - MLT1K LTR MaLR -358 237 127 5 1426 663 306 73 18 chrX 110319623 110320011 -56330285 - L1M4 LINE L1 -475 5816 5403 5 1426 492 62 0 0 chrX 110320308 110320372 -56329924 + (TTTC)n Simple_repeat Simple_repeat 1 64 0 5 1426 289 208 121 59 chrX 110320386 110320507 -56329789 - MT2A LTR ERVL 0 559 432 5 1426 2967 178 58 93 chrX 110320509 110321138 -56329158 + L1_Mus4 LINE L1 504 1119 -5497 5 1426 3737 86 2 13 chrX 110321138 110321666 -56328630 + L1Md_F2 LINE L1 6061 6582 0 5 1426 30135 112 18 13 chrX 110321666 110325868 -56324428 + L1_Mus4 LINE L1 1120 5259 -624 5 1426 423 0 0 0 chrX 110325868 110325915 -56324381 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 1426 495 0 0 0 chrX 110325915 110325969 -56324327 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1426 30135 128 58 6 chrX 110325969 110327215 -56323081 + L1_Mus4 LINE L1 5260 6634 -2 5 1426 791 314 16 40 chrX 110327235 110327484 -56322812 + B4 SINE B4 6 248 -44 5 1426 389 103 15 0 chrX 110328163 110328231 -56322065 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 5 1426 348 111 0 0 chrX 110328234 110328288 -56322008 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 1426 1650 251 29 52 chrX 110328289 110328697 -56321599 + MTD LTR MaLR 21 419 0 5 1426 231 270 0 26 chrX 110329192 110329268 -56321028 - L1MA9 LINE L1 -373 5939 5866 5 1426 504 0 0 0 chrX 110329457 110329513 -56320783 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 1426 681 162 33 55 chrX 110330424 110330607 -56319689 - Lx9 LINE L1 -7 7637 7459 5 1426 627 88 0 0 chrX 110331717 110331808 -56318488 + (TTTC)n Simple_repeat Simple_repeat 4 94 0 5 1426 1190 61 0 0 chrX 110332404 110332552 -56317744 - B1_Mus1 SINE Alu 0 148 1 5 1426 268 324 7 99 chrX 110333159 110333310 -56316986 - RMER4B LTR ERVK -442 143 7 5 1426 1612 187 10 50 chrX 110333344 110333796 -56316500 - RMER17C LTR ERVK -519 439 16 5 1426 317 212 138 23 chrX 110333843 110333930 -56316366 - B3 SINE B2 -98 118 22 5 1426 2571 212 38 55 chrX 110333930 110334565 -56315731 + RMER20B LTR ERVK 4 627 0 5 1426 2116 55 4 0 chrX 110334640 110334913 -56315383 - LTRIS2 LTR ERV1 0 564 291 5 1426 4380 17 0 0 chrX 110334913 110335439 -56314857 + L1Md_A LINE L1 5061 5586 -297 5 1426 8482 33 0 0 chrX 110335439 110336434 -56313862 + L1Md_A LINE L1 5587 6581 -1 5 1426 2311 63 0 23 chrX 110336434 110336743 -56313553 - LTRIS2 LTR ERV1 -262 302 1 5 1426 887 90 98 0 chrX 110336840 110336962 -56313334 + B1_Mus2 SINE Alu 1 134 -13 5 1426 780 91 0 0 chrX 110336963 110337073 -56313223 + (GAAA)n Simple_repeat Simple_repeat 1 110 0 5 1426 567 287 79 38 chrX 110337255 110337663 -56312633 - L1M2 LINE L1 -3274 2869 2421 5 1426 315 0 0 0 chrX 110337663 110337698 -56312598 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1426 277 292 134 42 chrX 110337698 110337835 -56312461 - L1M2 LINE L1 -3460 2420 2253 5 1426 246 128 0 0 chrX 110338491 110338530 -56311766 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1426 3131 65 7 5 chrX 110339478 110339896 -56310400 + BGLII LTR ERVK 3 421 0 5 1426 24 53 0 0 chrX 110341024 110341062 -56309234 + AT_rich Low_complexity Low_complexity 1 38 0 5 1426 3416 114 52 31 chrX 110341062 110341634 -56308662 - Lx LINE L1 -1 6653 6070 5 1426 28667 51 1 6 chrX 110341640 110346172 -56304124 - L1Md_F3 LINE L1 -14 6570 2059 5 1426 27139 64 3 40 chrX 110346175 110350207 -56300089 + L1Md_F3 LINE L1 1703 5586 -297 5 1426 7710 60 6 4 chrX 110350208 110351203 -56299093 + L1Md_F3 LINE L1 5588 6584 0 5 1426 1615 322 58 26 chrX 110351208 110352448 -56297848 + L1_Mur3 LINE L1 4419 5698 -182 5 1426 830 186 7 0 chrX 110352448 110352588 -56297708 + B1_Mur4 SINE Alu 4 144 -6 5 1426 1324 301 31 31 chrX 110352588 110352827 -56297469 + Lx7 LINE L1 5650 5889 -1807 5 1426 1679 118 13 0 chrX 110353002 110353270 -56297026 - L1Md_T LINE L1 -376 6206 5996 5 1426 3135 27 0 0 chrX 110353272 110353638 -56296658 + L1Md_A LINE L1 6215 6580 -2 5 1426 29 28 0 0 chrX 110353780 110353816 -56296480 + AT_rich Low_complexity Low_complexity 1 36 0 5 1426 732 23 0 0 chrX 110353890 110353976 -56296320 + (TTTC)n Simple_repeat Simple_repeat 2 87 0 5 1426 331 262 15 73 chrX 110354199 110354335 -56295961 - L1MA9 LINE L1 -232 6080 5953 5 1426 1665 198 6 6 chrX 110354354 110354679 -56295617 - Lx2B LINE L1 -13 6987 6663 5 1426 601 342 17 72 chrX 110354681 110355040 -56295256 - Lx9 LINE L1 -273 7371 7033 5 1426 2275 147 178 89 chrX 110355109 110355738 -56294558 + RMER6C LTR ERVK 3 687 -3 5 1426 2166 158 102 7 chrX 110355739 110356192 -56294104 - Lx2B LINE L1 -628 6372 5877 5 1426 2459 186 2 15 chrX 110356190 110356666 -56293630 + Lx2B LINE L1 6396 6884 -113 5 1426 186 43 0 0 chrX 110356666 110356689 -56293607 + (TGGG)n Simple_repeat Simple_repeat 3 25 0 5 1426 2009 243 52 12 chrX 110356689 110356775 -56293521 + Lx2B LINE L1 6885 6980 -17 5 1426 21 0 0 0 chrX 110356775 110356796 -56293500 + AT_rich Low_complexity Low_complexity 1 21 0 5 1426 377 323 5 0 chrX 110357233 110357419 -56292877 + MusHAL1 LINE L1 416 602 -2110 5 1426 989 266 13 17 chrX 110357439 110357737 -56292559 + Lx6 LINE L1 277 573 -7155 5 178 36045 44 1 4 chrX 110357776 110364218 -56286078 - L1Md_T LINE L1 0 6585 68 5 1427 2802 189 51 77 chrX 110364221 110365335 -56284961 + Lx6 LINE L1 582 1720 -4160 5 1427 956 123 0 7 chrX 110365335 110365474 -56284822 + B1_Mus1 SINE Alu 1 138 -10 5 1427 549 0 0 0 chrX 110365474 110365535 -56284761 + (CAAAA)n Simple_repeat Simple_repeat 2 62 0 5 1427 2625 166 45 136 chrX 110365535 110365615 -56284681 + Lx6 LINE L1 1721 1770 -4110 5 1427 4726 38 0 0 chrX 110365615 110366175 -56284121 - L1Md_A LINE L1 0 6582 6023 5 1427 2625 166 45 136 chrX 110366175 110366234 -56284062 + Lx6 LINE L1 1771 1785 -4095 5 1427 1393 148 36 0 chrX 110366234 110366484 -56283812 - Lx2 LINE L1 0 6997 6739 5 1427 2625 166 45 136 chrX 110366484 110366794 -56283502 + Lx6 LINE L1 1786 2096 -3784 5 1427 1182 54 7 0 chrX 110366794 110366941 -56283355 + B1_Mus1 SINE Alu 1 148 0 5 1427 458 227 62 0 chrX 110366994 110367091 -56283205 - RLTR20A LTR ERVK 0 541 439 5 1427 536 205 0 6 chrX 110367091 110367248 -56283048 + CT-rich Low_complexity Low_complexity 2 157 0 5 1427 405 0 0 0 chrX 110367250 110367295 -56283001 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1427 2429 157 2 27 chrX 110367295 110367708 -56282588 - RLTR20A LTR ERVK -138 403 1 5 1427 2877 171 110 3 chrX 110367708 110368353 -56281943 + Lx6 LINE L1 2094 2807 -3073 5 1427 249 33 0 0 chrX 110368353 110368383 -56281913 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5 1427 253 338 21 34 chrX 110368383 110368409 -56281887 + L1M4 LINE L1 2830 2854 -3292 5 1427 3486 145 29 5 chrX 110368445 110369074 -56281222 - L1_Mur2 LINE L1 -737 5140 4497 5 1427 6496 183 19 17 chrX 110369076 110370323 -56279973 + Lx5 LINE L1 5795 7044 -6 5 1427 1342 178 62 48 chrX 110370327 110370746 -56279550 + Lx6 LINE L1 3121 3545 -2335 5 1427 302 148 54 54 chrX 110370734 110370827 -56279469 + Lx6 LINE L1 5217 5309 -571 5 1427 2836 253 98 14 chrX 110370835 110371746 -56278550 - Lx6 LINE L1 0 7460 6256 5 1427 541 151 37 28 chrX 110371751 110371860 -56278436 + Lx6 LINE L1 6106 6215 -1245 5 1427 8932 83 8 17 chrX 110371861 110373143 -56277153 + Lx3_Mus LINE L1 5263 6536 -473 5 1427 1024 90 0 0 chrX 110373143 110373276 -56277020 + B1_Mm SINE Alu 4 136 -11 5 1427 522 0 0 0 chrX 110373276 110373334 -56276962 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 5 1427 8932 88 7 26 chrX 110373334 110373725 -56276571 + Lx3_Mus LINE L1 6537 6909 -100 5 1427 4242 213 34 43 chrX 110373727 110375111 -56275185 + Lx7 LINE L1 5408 6781 -915 5 1427 508 305 107 37 chrX 110375196 110375523 -56274773 + RMER20B LTR ERVK 55 404 -223 5 1427 4029 189 28 61 chrX 110375631 110376584 -56273712 + Lx7 LINE L1 6775 7696 0 5 1427 459 327 37 14 chrX 110376611 110376828 -56273468 - Lx9 LINE L1 -685 6959 6738 5 1427 401 255 0 0 chrX 110376847 110376941 -56273355 - Lx8 LINE L1 -143 7330 7237 5 1427 1465 54 16 0 chrX 110377259 110377444 -56272852 + B2_Mm2 SINE B2 2 189 -6 5 1427 377 209 36 18 chrX 110379333 110379445 -56270851 + L1MA4 LINE L1 6106 6219 -81 5 1427 2455 157 14 14 chrX 110379461 110380143 -56270153 + RMER17B LTR ERVK 20 958 0 5 1427 1113 229 125 19 chrX 110380270 110380630 -56269666 - Lx4B LINE L1 -2 7056 6659 5 1427 4377 134 13 21 chrX 110380629 110381378 -56268918 + Lx LINE L1 5866 6608 -46 5 1427 7703 47 0 2 chrX 110381378 110382317 -56267979 + L1Md_F2 LINE L1 5646 6582 0 5 1427 554 326 41 0 chrX 110382354 110382575 -56267721 + ORR1D2 LTR MaLR 3 232 -138 5 1427 457 147 0 0 chrX 110382766 110382841 -56267455 - L1_Mur3 LINE L1 -107 5773 5699 5 1427 723 183 27 16 chrX 110382839 110383022 -56267274 - L1_Mur3 LINE L1 -4115 1765 1581 5 1427 6332 174 26 32 chrX 110383027 110383476 -56266820 - Lx4B LINE L1 -11 7047 6598 5 1427 1083 95 0 0 chrX 110383476 110383623 -56266673 + B1_Mus2 SINE Alu 1 147 0 5 1427 6332 174 26 32 chrX 110383623 110384425 -56265871 - Lx4B LINE L1 -461 6597 5804 5 1427 234 62 0 0 chrX 110384464 110384496 -56265800 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 1427 1189 105 55 0 chrX 110384637 110384794 -56265502 + B2_Mm1t SINE B2 3 160 -33 5 1427 279 71 0 0 chrX 110384794 110384836 -56265460 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 5 1427 1189 105 55 0 chrX 110384836 110384859 -56265437 + B2_Mm1t SINE B2 161 192 -1 5 1427 2084 130 9 16 chrX 110384940 110385261 -56265035 + ORR1A2 LTR MaLR 1 319 -8 5 1427 870 263 34 29 chrX 110385332 110385536 -56264760 + B3 SINE B2 4 208 -8 5 1427 212 167 0 0 chrX 110385681 110385711 -56264585 + B1_Mus1 SINE Alu 4 33 -115 5 1427 420 356 62 6 chrX 110386091 110386252 -56264044 + HAL1 LINE L1 1687 1856 -651 5 1427 260 329 27 0 chrX 110386551 110386624 -56263672 - PB1D10 SINE Alu -34 83 9 5 1427 306 0 0 0 chrX 110386684 110386718 -56263578 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1427 25 65 0 0 chrX 110387056 110387102 -56263194 + AT_rich Low_complexity Low_complexity 1 46 0 5 1427 384 22 0 0 chrX 110387164 110387209 -56263087 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1427 34782 81 6 7 chrX 110387521 110393669 -56256627 - L1Md_F2 LINE L1 -12 6570 217 5 1427 1362 85 0 25 chrX 110393871 110394075 -56256221 + L1Md_F2 LINE L1 6384 6582 0 5 1427 357 275 12 0 chrX 110394623 110394703 -56255593 - ID4_ SINE ID -1 82 2 5 1427 378 0 0 0 chrX 110394985 110395027 -56255269 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1427 26 30 0 0 chrX 110395216 110395249 -56255047 + AT_rich Low_complexity Low_complexity 1 33 0 6 1427 1788 165 16 16 chrX 110395678 110395999 -56254297 - Lx4B LINE L1 -87 6971 6651 6 1427 347 103 17 17 chrX 110395992 110396051 -56254245 + Lx5 LINE L1 6195 6253 -797 6 1427 256 204 0 0 chrX 110396067 110396111 -56254185 + Lx4B LINE L1 6227 6270 -788 6 1427 1278 160 5 36 chrX 110396110 110396331 -56253965 + Lx4B LINE L1 6440 6653 -405 6 1427 306 50 0 0 chrX 110396719 110396759 -56253537 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 6 1427 26 30 0 0 chrX 110397687 110397720 -56252576 + AT_rich Low_complexity Low_complexity 1 33 0 6 1427 185 0 40 0 chrX 110398088 110398113 -56252183 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 6 1427 222 390 65 0 chrX 110399114 110399191 -56251105 + ID4_ SINE ID 2 83 0 6 1427 6523 44 10 0 chrX 110399485 110400296 -56250000 - L1Md_F2 LINE L1 -1 6581 5763 6 1427 484 287 7 7 chrX 110400622 110400759 -56249537 - MIR SINE MIR -124 138 2 6 1427 947 61 96 22 chrX 110401337 110401472 -56248824 - B1_Mus2 SINE Alu -1 146 2 6 1427 273 345 131 0 chrX 110401505 110401696 -56248600 + MIR SINE MIR 3 218 -44 6 1427 1661 276 67 43 chrX 110402457 110403048 -56247248 - Tigger7 DNA MER2_type -95 610 9 6 1427 579 254 47 17 chrX 110403296 110403468 -56246828 - Tigger1 DNA MER2_type -1 2417 2241 6 1427 271 269 165 13 chrX 110403463 110403491 -56246805 - Tigger1 DNA MER2_type -2277 141 114 6 1427 267 31 0 0 chrX 110403491 110403523 -56246773 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6 1427 271 269 165 13 chrX 110403523 110403573 -56246723 - Tigger1 DNA MER2_type -2305 113 51 6 1427 28 0 0 0 chrX 110403607 110403635 -56246661 + AT_rich Low_complexity Low_complexity 1 28 0 6 1427 330 345 27 0 chrX 110404199 110404309 -56245987 + PB1D10 SINE Alu 2 114 -3 6 1427 408 97 0 0 chrX 110404672 110404734 -56245562 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 1427 253 322 81 0 chrX 110404792 110404879 -56245417 + B1F2 SINE Alu 1 94 -55 6 1427 210 222 18 18 chrX 110404948 110405003 -56245293 - L2 LINE L2 -955 2464 2410 6 1427 542 99 0 0 chrX 110405741 110405832 -56244464 + Lx9 LINE L1 7549 7639 -5 6 1427 23 0 0 0 chrX 110405837 110405860 -56244436 + AT_rich Low_complexity Low_complexity 1 23 0 6 1427 603 306 11 11 chrX 110406065 110406253 -56244043 - MER5A DNA MER1_type 0 189 2 6 1427 984 128 0 0 chrX 110406935 110407091 -56243205 + (TTTC)n Simple_repeat Simple_repeat 2 157 0 6 1427 1090 99 31 0 chrX 110407091 110407252 -56243044 - B2_Mm2 SINE B2 -28 167 2 6 1427 180 158 0 0 chrX 110407402 110407440 -56242856 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1427 315 38 57 0 chrX 110407570 110407623 -56242673 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 1427 572 250 98 31 chrX 110407688 110407882 -56242414 + Lx8 LINE L1 7265 7471 -2 6 1427 28 0 0 0 chrX 110407882 110407910 -56242386 + AT_rich Low_complexity Low_complexity 1 28 0 6 1427 483 174 70 0 chrX 110407921 110408007 -56242289 + RSINE1 SINE B4 12 103 -62 6 1427 270 0 0 0 chrX 110408013 110408043 -56242253 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1427 523 270 173 6 chrX 110408071 110408250 -56242046 + B3 SINE B2 2 210 -6 6 1427 1122 278 71 18 chrX 110408624 110409016 -56241280 - BGLII_B LTR ERVK -21 420 8 6 1427 22 35 0 0 chrX 110409620 110409649 -56240647 + AT_rich Low_complexity Low_complexity 1 29 0 6 1427 354 205 0 0 chrX 110411047 110411125 -56239171 + (CA)n Simple_repeat Simple_repeat 1 78 0 6 1427 420 20 0 0 chrX 110413101 110413150 -56237146 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1427 207 125 0 0 chrX 110413405 110413445 -56236851 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1427 180 111 0 0 chrX 110414415 110414442 -56235854 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 1427 22 0 0 0 chrX 110414852 110414874 -56235422 + AT_rich Low_complexity Low_complexity 1 22 0 6 1427 23 0 0 0 chrX 110414923 110414946 -56235350 + AT_rich Low_complexity Low_complexity 1 23 0 6 1427 254 169 0 33 chrX 110415833 110415894 -56234402 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 6 1427 32 0 0 0 chrX 110418342 110418374 -56231922 + AT_rich Low_complexity Low_complexity 1 32 0 6 1427 21 36 0 0 chrX 110418747 110418775 -56231521 + AT_rich Low_complexity Low_complexity 1 28 0 6 1427 222 321 0 0 chrX 110419144 110419200 -56231096 + ID4 SINE ID 10 65 -18 6 1427 32 26 0 0 chrX 110419526 110419565 -56230731 + AT_rich Low_complexity Low_complexity 1 39 0 6 1427 322 283 0 32 chrX 110421397 110421492 -56228804 - BC1_Mm scRNA scRNA -55 97 6 6 1427 232 308 0 0 chrX 110423487 110423539 -56226757 - tRNA-Ala-GCY_ tRNA tRNA -15 60 9 6 1427 228 344 31 0 chrX 110423539 110423551 -56226745 - ID4 SINE ID -17 66 1 6 1427 5061 58 34 1 chrX 110423762 110424414 -56225882 + L1_Mus2 LINE L1 5892 6564 -2 6 1427 428 252 61 35 chrX 110424427 110424542 -56225754 + PB1D9 SINE Alu 2 119 -1 6 1427 1758 106 0 45 chrX 110424634 110424922 -56225374 - L1Md_F2 LINE L1 -12 6570 6296 6 1427 528 111 0 0 chrX 110425103 110425184 -56225112 + (TCCC)n Simple_repeat Simple_repeat 4 84 0 6 1427 545 246 21 14 chrX 110425203 110425347 -56224949 - B1_Mur1 SINE Alu -2 147 3 6 1427 932 275 136 8 chrX 110425597 110425962 -56224334 + MTD LTR MaLR 1 405 -14 6 1427 211 203 0 30 chrX 110425968 110426034 -56224262 + CT-rich Low_complexity Low_complexity 3 66 0 6 1427 219 288 0 0 chrX 110426120 110426186 -56224110 - L2a LINE L2 -154 3272 3207 6 1427 349 385 43 27 chrX 110426206 110426462 -56223834 - L2a LINE L2 -338 3081 2822 6 1427 541 301 191 72 chrX 110426465 110427113 -56223183 - L2a LINE L2 -1927 1492 768 6 1427 1366 205 121 14 chrX 110428424 110428780 -56221516 + Lx9 LINE L1 7251 7644 0 6 1427 501 165 0 0 chrX 110429026 110429123 -56221173 + (TG)n Simple_repeat Simple_repeat 2 98 0 6 1427 208 291 56 37 chrX 110429490 110429597 -56220699 + MIRb SINE MIR 114 222 -46 6 1427 24 0 0 0 chrX 110431647 110431671 -56218625 + AT_rich Low_complexity Low_complexity 1 24 0 6 1427 324 0 0 0 chrX 110433285 110433321 -56216975 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1427 3348 55 2 0 chrX 110433817 110434239 -56216057 + L1Md_A LINE L1 6160 6582 0 6 1427 29 28 0 0 chrX 110434336 110434372 -56215924 + AT_rich Low_complexity Low_complexity 1 36 0 6 1427 648 38 0 0 chrX 110434769 110434848 -56215448 + (CA)n Simple_repeat Simple_repeat 2 80 0 6 1427 1361 298 97 26 chrX 110435799 110436371 -56213925 - Lx8 LINE L1 -299 7174 6582 6 1427 285 151 0 0 chrX 110436389 110436442 -56213854 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1427 912 249 0 42 chrX 110436456 110436670 -56213626 + B3 SINE B2 12 216 0 6 1427 234 0 0 0 chrX 110436906 110436932 -56213364 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 1427 27 62 0 0 chrX 110437593 110437641 -56212655 + AT_rich Low_complexity Low_complexity 1 48 0 6 1427 382 235 20 30 chrX 110438197 110438298 -56211998 - PB1 SINE Alu -7 120 21 6 1427 609 14 0 0 chrX 110438940 110439010 -56211286 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 6 1427 1062 71 0 89 chrX 110439011 110439180 -56211116 - B2_Mm2 SINE B2 -41 154 1 6 1427 207 100 0 0 chrX 110439280 110439310 -56210986 + (TA)n Simple_repeat Simple_repeat 1 30 0 6 1427 1026 151 22 6 chrX 110439549 110439729 -56210567 - RLTR31_Mur LTR ERVK -207 346 164 6 1427 7545 78 1 0 chrX 110439740 110441194 -56209102 - L1_Mus1 LINE L1 -2 6565 5111 6 1427 211 280 0 20 chrX 110441236 110441287 -56209009 + L2c LINE L2 3273 3322 -65 6 1427 360 336 36 0 chrX 110441366 110441476 -56208820 + B1F2 SINE Alu 30 143 -6 6 1427 813 291 21 138 chrX 110441542 110441969 -56208327 + MTE2b LTR MaLR 3 379 0 6 1427 523 178 15 15 chrX 110442638 110442769 -56207527 + Lx LINE L1 6509 6639 -15 6 1427 712 229 0 14 chrX 110442840 110442982 -56207314 - B1_Mus1 SINE Alu -6 142 3 6 1427 1381 126 0 26 chrX 110443149 110443378 -56206918 - Lx2 LINE L1 0 6997 6775 6 1427 4955 121 8 5 chrX 110443378 110444134 -56206162 - Lx2 LINE L1 -354 6643 5886 6 1427 2560 91 21 3 chrX 110444126 110444499 -56205797 - MusHAL1 LINE L1 -1467 1245 866 6 1427 3540 102 156 100 chrX 110444503 110445361 -56204935 - RMER17A2 LTR ERVK 0 906 1 6 1427 2408 65 15 0 chrX 110445371 110445709 -56204587 - MusHAL1 LINE L1 -1851 861 519 6 1427 301 357 23 38 chrX 110446144 110446409 -56203887 - L1MA6 LINE L1 -167 6133 5873 6 1427 317 0 70 0 chrX 110446415 110446458 -56203838 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 6 1427 1186 35 7 0 chrX 110446459 110446602 -56203694 - B1_Mus2 SINE Alu -2 145 2 6 1427 418 248 25 25 chrX 110448064 110448184 -56202112 - MTD LTR MaLR -299 120 1 6 1427 5004 34 0 0 chrX 110449064 110449651 -56200645 - L1Md_T LINE L1 0 6582 5996 6 1427 489 139 191 0 chrX 110450572 110450687 -56199609 + Lx2B LINE L1 6859 6995 -5 6 1427 308 324 169 17 chrX 110450747 110450982 -56199314 - B4A SINE B4 -11 281 2 6 1427 569 296 86 32 chrX 110451131 110451237 -56199059 - B4 SINE B4 -51 241 134 6 1427 648 0 0 0 chrX 110451237 110451309 -56198987 + (TC)n Simple_repeat Simple_repeat 1 72 0 6 1427 569 296 86 32 chrX 110451309 110451422 -56198874 - B4 SINE B4 -159 133 10 6 1427 21 0 0 0 chrX 110452796 110452817 -56197479 + AT_rich Low_complexity Low_complexity 1 21 0 6 1427 21 36 0 0 chrX 110453452 110453480 -56196816 + AT_rich Low_complexity Low_complexity 1 28 0 6 1427 684 345 37 33 chrX 110454329 110454599 -56195697 + B4A SINE B4 4 274 -18 6 1427 365 226 26 17 chrX 110454638 110454755 -56195541 + (CA)n Simple_repeat Simple_repeat 1 118 0 6 1427 684 36 0 0 chrX 110454901 110454984 -56195312 + (TTCC)n Simple_repeat Simple_repeat 2 84 0 6 1427 3955 204 35 24 chrX 110454985 110455803 -56194493 - Lx6 LINE L1 -177 7283 6457 6 1427 26588 8 0 0 chrX 110455803 110458836 -56191460 + L1Md_A LINE L1 2554 5586 -297 6 1427 8843 12 0 0 chrX 110458836 110459832 -56190464 + L1Md_A LINE L1 5587 6582 0 6 1427 3044 223 51 8 chrX 110459836 110460582 -56189714 - Lx7 LINE L1 -1232 6464 5687 7 1427 3553 176 77 3 chrX 110460618 110461405 -56188891 - Lx6 LINE L1 -1513 5947 5104 6 1427 307 292 16 21 chrX 110461427 110461536 -56188760 + CT-rich Low_complexity Low_complexity 1 108 0 7 1427 234 278 0 118 chrX 110461549 110461651 -56188645 - ID_B1 SINE B4 -49 175 86 7 1427 261 210 62 0 chrX 110463020 110463101 -56187195 - L1MA7 LINE L1 -12 6279 6194 7 1427 232 91 45 0 chrX 110463452 110463496 -56186800 + (TA)n Simple_repeat Simple_repeat 2 47 0 7 1427 3356 54 51 45 chrX 110463605 110464074 -56186222 - L1_Mus2 LINE L1 -1 6565 6094 7 1427 215 114 23 0 chrX 110465175 110465219 -56185077 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1427 35319 35 0 0 chrX 110465498 110470882 -56179414 + L1Md_T LINE L1 109 5589 -297 7 1427 8990 5 0 0 chrX 110470882 110471878 -56178418 + L1Md_T LINE L1 5590 6585 0 7 1427 2447 36 10 0 chrX 110473341 110473642 -56176654 + L1Md_F2 LINE L1 6276 6579 -3 7 1427 21 71 0 0 chrX 110474268 110474310 -56175986 + AT_rich Low_complexity Low_complexity 1 42 0 7 1427 22 0 0 0 chrX 110474533 110474555 -56175741 + AT_rich Low_complexity Low_complexity 1 22 0 7 1427 1353 279 97 18 chrX 110474704 110475382 -56174914 - L1MA10 LINE L1 -8 6326 5595 7 1427 527 287 61 15 chrX 110475456 110475665 -56174631 - MLT1B LTR MaLR -162 212 6 7 1427 201 321 0 0 chrX 110475876 110475932 -56174364 + L3 LINE CR1 3770 3825 -664 7 1427 588 65 0 0 chrX 110478191 110478268 -56172028 + (TCCC)n Simple_repeat Simple_repeat 4 80 0 7 1427 4102 105 15 3 chrX 110478298 110478893 -56171403 - Lx3A LINE L1 -2 6979 6378 7 1427 326 23 0 23 chrX 110478945 110478989 -56171307 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 7 1427 3518 94 20 155 chrX 110478991 110479696 -56170600 - Lx3_Mus LINE L1 -23 6986 6377 7 1427 7601 127 9 18 chrX 110481803 110483918 -56166378 - Lx LINE L1 -2 6652 4561 7 1427 3421 282 54 35 chrX 110483915 110485183 -56165113 - Lx9 LINE L1 -5 7639 6348 7 1427 512 0 32 0 chrX 110485188 110485251 -56165045 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 7 1427 180 0 0 0 chrX 110485252 110485272 -56165024 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 1427 3710 72 2 12 chrX 110485275 110485768 -56164528 + L1_Mus2 LINE L1 6079 6566 0 7 1427 25 0 0 0 chrX 110485768 110485793 -56164503 + AT_rich Low_complexity Low_complexity 1 25 0 7 1427 23 33 0 0 chrX 110485852 110485882 -56164414 + AT_rich Low_complexity Low_complexity 1 30 0 7 1427 1540 256 8 8 chrX 110485910 110486276 -56164020 + Lx6 LINE L1 7079 7444 -16 7 1427 38 39 0 0 chrX 110486276 110486328 -56163968 + AT_rich Low_complexity Low_complexity 1 52 0 7 1427 239 239 14 56 chrX 110486357 110486428 -56163868 + ID4 SINE ID 2 69 -14 7 1427 607 84 0 0 chrX 110487066 110487149 -56163147 - B2_Mm2 SINE B2 -65 130 48 7 1427 7642 57 2 4 chrX 110487227 110488776 -56161520 - L1Md_F2 LINE L1 -10 6572 5029 7 1427 234 261 98 32 chrX 110489471 110489594 -56160702 - L1ME3A LINE L1 0 6173 6043 7 1427 234 0 0 0 chrX 110489618 110489644 -56160652 + (ATTTG)n Simple_repeat Simple_repeat 4 29 0 7 1427 606 197 0 24 chrX 110489996 110490121 -56160175 - Lx2 LINE L1 -933 4950 4829 7 1427 8392 154 23 7 chrX 110490128 110491651 -56158645 + Lx2 LINE L1 4931 6473 -524 7 1427 2508 49 6 227 chrX 110491651 110492149 -56158147 - RLTR10 LTR ERVK -2 388 1 7 1427 8392 136 36 12 chrX 110492149 110492644 -56157652 + Lx2 LINE L1 6474 6993 -4 7 178 3121 148 45 136 chrX 110493151 110493910 -56156386 - RMER6C LTR ERVK 0 690 1 7 1428 850 162 51 23 chrX 110494323 110494500 -56155796 - B2_Mm2 SINE B2 -13 182 1 7 1428 201 357 68 10 chrX 110494598 110494755 -56155541 + MIRb SINE MIR 2 176 -92 7 1428 4554 61 2 10 chrX 110496505 110497097 -56153199 - L1Md_F2 LINE L1 -3 6579 5993 7 1428 2921 49 0 0 chrX 110497103 110497451 -56152845 + L1Md_F2 LINE L1 5588 5935 -647 7 1428 5934 46 3 1 chrX 110497443 110498190 -56152106 + L1_Mm LINE L1 3919 4666 -1217 7 1428 382 186 12 0 chrX 110498199 110498285 -56152011 - RMER1C Other Other -1 1341 1255 7 1428 1090 69 25 0 chrX 110498297 110498456 -56151840 + (TCTA)n Simple_repeat Simple_repeat 1 163 0 7 1428 21 0 0 0 chrX 110499707 110499728 -56150568 + AT_rich Low_complexity Low_complexity 1 21 0 7 1428 487 54 0 39 chrX 110501280 110501357 -56148939 + (GGGAGA)n Simple_repeat Simple_repeat 5 78 0 1 1428 313 319 25 25 chrX 110501498 110501617 -56148679 + Charlie1a DNA MER1_type 1037 1155 -300 2 1428 30 0 0 0 chrX 110501619 110501649 -56148647 + AT_rich Low_complexity Low_complexity 1 30 0 3 1428 6968 64 0 0 chrX 110501801 110502693 -56147603 - L1_Mus2 LINE L1 -1 6565 5674 4 1428 1703 135 0 0 chrX 110503177 110503443 -56146853 - Lx LINE L1 -12 6642 6377 5 1428 1656 261 104 108 chrX 110503818 110504556 -56145740 - Lx5 LINE L1 -17 7033 6299 6 1428 207 204 0 0 chrX 110504574 110504618 -56145678 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 7 1428 185 326 0 0 chrX 110505489 110505538 -56144758 + L3 LINE CR1 758 806 -3683 8 1428 264 267 33 0 chrX 110505839 110505899 -56144397 - B4 SINE B4 -129 163 102 9 1428 510 17 0 0 chrX 110505912 110505971 -56144325 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 1428 228 200 30 15 chrX 110505971 110506037 -56144259 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 1428 238 187 0 62 chrX 110506353 110506433 -56143863 + (CAAA)n Simple_repeat Simple_repeat 2 76 0 1 1428 190 336 0 65 chrX 110506984 110507108 -56143188 - L3 LINE CR1 -4368 121 6 1 1428 368 394 25 31 chrX 110510302 110510462 -56139834 + RSINE1 SINE B4 5 163 -2 1 1428 5575 190 48 9 chrX 110510625 110511399 -56138897 - Lx2B LINE L1 -7 6993 6114 1 1428 2277 119 0 0 chrX 110511399 110511726 -56138570 - ORR1A2 LTR MaLR 0 327 1 1 1428 5575 164 11 8 chrX 110511726 110512406 -56137890 - Lx2B LINE L1 -887 6113 5435 1 1428 19733 54 4 4 chrX 110512408 110515654 -56134642 - L1Md_F2 LINE L1 -4 6578 3329 1 1428 994 251 0 50 chrX 110516060 110516282 -56134014 + B3 SINE B2 5 215 -1 1 1428 21 0 0 0 chrX 110517263 110517284 -56133012 + AT_rich Low_complexity Low_complexity 1 21 0 1 1428 28 0 0 0 chrX 110519519 110519547 -56130749 + AT_rich Low_complexity Low_complexity 1 28 0 2 1428 1575 164 47 50 chrX 110519978 110520093 -56130203 - Lx2A1 LINE L1 -561 6447 6344 2 1428 3081 112 28 41 chrX 110520093 110520632 -56129664 + Lx LINE L1 6123 6654 0 2 1428 1575 164 47 50 chrX 110520632 110520837 -56129459 - Lx2A1 LINE L1 -665 6343 6128 2 1428 212 0 36 0 chrX 110521039 110521067 -56129229 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1428 207 219 0 0 chrX 110522235 110522276 -56128020 + T-rich Low_complexity Low_complexity 1 41 0 2 1428 3164 89 5 2 chrX 110522701 110523138 -56127158 - L1_Mus3 LINE L1 -1 6637 6200 2 1428 264 30 0 0 chrX 110523463 110523496 -56126800 + (TTG)n Simple_repeat Simple_repeat 1 33 0 2 1428 201 39 0 0 chrX 110523514 110523540 -56126756 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1428 300 347 23 46 chrX 110523540 110523660 -56126636 - RSINE1 SINE B4 -46 119 2 2 1428 26 50 0 0 chrX 110523688 110523728 -56126568 + AT_rich Low_complexity Low_complexity 1 40 0 2 1428 207 0 0 0 chrX 110525306 110525329 -56124967 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1428 212 130 43 0 chrX 110525424 110525470 -56124826 + (TA)n Simple_repeat Simple_repeat 1 48 0 3 1428 1026 100 0 0 chrX 110525797 110525977 -56124319 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 3 1428 11648 86 15 55 chrX 110525991 110528967 -56121329 - Lx3A LINE L1 -17 6964 4114 3 1428 410 118 14 14 chrX 110528965 110529034 -56121262 + Lx3A LINE L1 4026 4094 -1792 3 1428 183 129 0 0 chrX 110529452 110529483 -56120813 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1428 603 40 0 0 chrX 110530325 110530399 -56119897 + (GA)n Simple_repeat Simple_repeat 1 74 0 3 1428 21 89 0 0 chrX 110531122 110531178 -56119118 + AT_rich Low_complexity Low_complexity 1 56 0 3 1428 428 51 0 17 chrX 110531196 110531256 -56119040 + (TTTC)n Simple_repeat Simple_repeat 1 59 0 3 1428 1082 70 35 0 chrX 110531256 110531399 -56118897 - B1_Mus1 SINE Alu 0 148 1 3 1428 208 191 0 21 chrX 110531862 110531910 -56118386 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 3 1428 2180 302 52 33 chrX 110532357 110533229 -56117067 - Lx9 LINE L1 -19 7625 6738 4 1428 570 67 0 0 chrX 110533243 110533318 -56116978 + (TTTA)n Simple_repeat Simple_repeat 2 76 0 4 1428 872 264 15 5 chrX 110533319 110533521 -56116775 - B3 SINE B2 -12 204 1 4 1428 5210 169 17 5 chrX 110533698 110534714 -56115582 + Lx2 LINE L1 5904 6996 -1 4 1428 294 115 0 0 chrX 110536478 110536530 -56113766 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 4 1428 517 226 118 15 chrX 110536532 110536667 -56113629 - B1_Mur2 SINE Alu 0 149 1 4 1428 305 24 24 0 chrX 110536810 110536852 -56113444 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1428 629 296 6 30 chrX 110537768 110537932 -56112364 + RSINE1 SINE B4 6 165 0 4 1428 252 137 0 0 chrX 110538858 110538909 -56111387 + (T)n Simple_repeat Simple_repeat 1 51 0 4 1428 1045 119 63 21 chrX 110538910 110539083 -56111213 - RLTR47_MM LTR ERV1 -85 447 263 4 1428 603 40 0 0 chrX 110539083 110539157 -56111139 + (TTTC)n Simple_repeat Simple_repeat 2 75 0 5 1428 1045 119 63 21 chrX 110539157 110539172 -56111124 - RLTR47_MM LTR ERV1 -270 262 251 4 1428 2349 68 0 6 chrX 110539175 110539486 -56110810 - L1Md_F2 LINE L1 -21 6561 6253 5 1428 31 58 0 0 chrX 110539693 110539745 -56110551 + AT_rich Low_complexity Low_complexity 1 52 0 5 1428 5224 115 31 33 chrX 110540670 110541273 -56109023 - Lx2 LINE L1 -584 6413 5798 5 1428 1109 68 0 14 chrX 110541273 110541421 -56108875 - B1_Mm SINE Alu -1 146 1 5 1428 5224 159 20 36 chrX 110541421 110541912 -56108384 - Lx2 LINE L1 -86 5797 5319 5 1428 570 54 0 0 chrX 110541912 110541986 -56108310 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 5 1428 740 202 11 6 chrX 110541992 110542171 -56108125 - Lx3A LINE L1 -18 6963 6784 5 1428 5224 159 20 36 chrX 110542171 110542581 -56107715 - Lx2 LINE L1 -565 5318 4894 5 1428 2120 108 22 22 chrX 110542730 110543088 -56107208 - L1_Mus3 LINE L1 0 6638 6281 5 1428 21 82 0 0 chrX 110543164 110543213 -56107083 + AT_rich Low_complexity Low_complexity 1 49 0 5 1428 223 122 0 39 chrX 110543247 110543298 -56106998 + (TTA)n Simple_repeat Simple_repeat 1 49 0 5 1428 1772 296 65 23 chrX 110543368 110544107 -56106189 - Lx8 LINE L1 -1063 6410 5641 6 1428 517 260 44 44 chrX 110544205 110544380 -56105916 - Lx8 LINE L1 -1191 4689 4514 6 1428 257 48 48 0 chrX 110544380 110544422 -56105874 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 6 1428 517 260 44 44 chrX 110544422 110544451 -56105845 - Lx8 LINE L1 -1367 4513 4485 6 1428 574 289 65 22 chrX 110544453 110544774 -56105522 - Lx8 LINE L1 -2458 3685 3291 6 1428 344 282 53 72 chrX 110544821 110545085 -56105211 - Lx8 LINE L1 -6483 1245 987 6 1428 207 0 0 0 chrX 110545972 110545995 -56104301 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1428 900 87 71 0 chrX 110545995 110546122 -56104174 - B1_Mus1 SINE Alu -9 139 4 6 1428 335 196 0 21 chrX 110546296 110546353 -56103943 + polypyrimidine Low_complexity Low_complexity 37 93 0 6 1428 1096 79 6 6 chrX 110546353 110546532 -56103764 + (TTC)n Simple_repeat Simple_repeat 2 180 0 6 1428 335 196 0 21 chrX 110546532 110546568 -56103728 + polypyrimidine Low_complexity Low_complexity 2 36 0 6 1428 1488 61 0 0 chrX 110546569 110546929 -56103367 + (TTC)n Simple_repeat Simple_repeat 1 360 0 6 1428 195 42 0 0 chrX 110546930 110546954 -56103342 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1428 1084 58 0 0 chrX 110546954 110547091 -56103205 - B1_Mus1 SINE Alu -11 137 1 6 1428 263 287 92 22 chrX 110547393 110547578 -56102718 - L1M3 LINE L1 -292 5897 5700 7 1428 342 98 0 0 chrX 110547966 110548017 -56102279 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 1428 1261 184 32 29 chrX 110548830 110549109 -56101187 + Lx9 LINE L1 7186 7465 -179 7 1428 405 0 0 0 chrX 110549114 110549159 -56101137 + (TATAA)n Simple_repeat Simple_repeat 5 49 0 7 1428 435 175 34 34 chrX 110549167 110549285 -56101011 + Lx9 LINE L1 7526 7643 -1 7 1428 441 0 0 0 chrX 110549297 110549346 -56100950 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 7 1428 463 271 19 71 chrX 110549357 110549512 -56100784 - B3A SINE B2 -8 190 44 7 1428 2765 117 0 0 chrX 110549608 110550020 -56100276 + L1_Mus4 LINE L1 6224 6635 -1 7 1428 423 0 0 0 chrX 110550481 110550528 -56099768 + (TA)n Simple_repeat Simple_repeat 2 48 0 7 1428 1021 57 0 14 chrX 110550925 110551068 -56099228 + (TTTCC)n Simple_repeat Simple_repeat 4 144 0 7 1428 631 112 9 9 chrX 110551068 110551176 -56099120 + (TTTC)n Simple_repeat Simple_repeat 2 109 0 7 1428 543 234 23 8 chrX 110551184 110551313 -56098983 - Lx6 LINE L1 -41 7419 7289 8 1428 32 75 0 0 chrX 110552851 110552918 -56097378 + AT_rich Low_complexity Low_complexity 1 67 0 8 1428 273 211 64 26 chrX 110553506 110553584 -56096712 - Lx7 LINE L1 -5 7691 7611 8 1428 370 292 108 0 chrX 110553669 110553789 -56096507 - Lx7 LINE L1 -398 7298 7166 8 1428 180 0 0 0 chrX 110554051 110554071 -56096225 + (TA)n Simple_repeat Simple_repeat 2 21 0 8 1428 441 0 0 0 chrX 110554071 110554119 -56096177 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 1428 33 66 0 0 chrX 110554119 110554180 -56096116 + AT_rich Low_complexity Low_complexity 1 61 0 8 1428 1977 103 0 3 chrX 110554773 110555064 -56095232 + L1_Mus4 LINE L1 6328 6617 -19 8 1428 22 94 0 0 chrX 110555161 110555225 -56095071 + AT_rich Low_complexity Low_complexity 1 64 0 8 1428 278 127 55 0 chrX 110557578 110557633 -56092663 + Lx9 LINE L1 7416 7473 -171 8 1428 249 193 54 27 chrX 110558304 110558416 -56091880 + (TA)n Simple_repeat Simple_repeat 2 116 0 8 1428 220 383 26 17 chrX 110559655 110559772 -56090524 + MIRm SINE MIR 157 274 -2 9 1428 22 0 0 0 chrX 110560787 110560809 -56089487 + AT_rich Low_complexity Low_complexity 1 22 0 9 1428 29 0 0 0 chrX 110560934 110560963 -56089333 + AT_rich Low_complexity Low_complexity 1 29 0 9 1428 29 47 0 0 chrX 110561560 110561603 -56088693 + AT_rich Low_complexity Low_complexity 1 43 0 9 1428 225 0 0 0 chrX 110561673 110561698 -56088598 + (A)n Simple_repeat Simple_repeat 1 25 0 9 1428 591 313 78 112 chrX 110561698 110561922 -56088374 - MTD LTR MaLR -44 375 129 9 1428 642 85 9 9 chrX 110561922 110562029 -56088267 + Lx LINE L1 6537 6643 -11 9 1428 1617 85 8 8 chrX 110562017 110562254 -56088042 + L1_Mus2 LINE L1 6329 6565 -1 9 1428 591 313 78 112 chrX 110562254 110562348 -56087948 - MTD LTR MaLR -291 128 68 9 1428 415 243 23 73 chrX 110562356 110562574 -56087722 - RMER17C LTR ERVK -133 277 71 9 1428 795 284 177 20 chrX 110563782 110564177 -56086119 - Lx8 LINE L1 -39 7434 6978 9 1428 748 263 64 9 chrX 110564188 110564407 -56085889 - Lx8 LINE L1 -560 6913 6683 9 1428 230 73 24 0 chrX 110565081 110565122 -56085174 + (CAAAAA)n Simple_repeat Simple_repeat 3 44 0 1 1428 477 225 153 0 chrX 110565195 110565404 -56084892 - Lx9 LINE L1 -8 7636 7396 1 1428 23 33 0 0 chrX 110565487 110565517 -56084779 + AT_rich Low_complexity Low_complexity 1 30 0 1 1428 414 282 0 75 chrX 110566047 110566181 -56084115 + Tigger10 DNA Tigger 1687 1810 -33 1 1428 443 122 24 0 chrX 110567301 110567383 -56082913 + Lx LINE L1 6557 6640 -14 1 1428 279 0 0 0 chrX 110567383 110567414 -56082882 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1428 21 0 0 0 chrX 110567860 110567881 -56082415 + AT_rich Low_complexity Low_complexity 1 21 0 1 1428 23 0 0 0 chrX 110568528 110568551 -56081745 + AT_rich Low_complexity Low_complexity 1 23 0 1 1428 304 331 64 19 chrX 110569540 110569697 -56080599 - MIR SINE MIR -41 221 58 1 1428 30 45 0 0 chrX 110572982 110573026 -56077270 + AT_rich Low_complexity Low_complexity 1 44 0 1 1428 259 313 7 30 chrX 110573466 110573601 -56076695 - Lx2B LINE L1 -15 6985 6854 1 1428 2297 115 25 13 chrX 110573627 110574022 -56076274 - Lx3B LINE L1 -791 6182 5783 1 1428 3841 109 41 3 chrX 110574042 110574631 -56075665 - Lx LINE L1 -7 6647 6037 1 1428 3265 140 52 14 chrX 110574631 110575389 -56074907 + Lx LINE L1 5279 6055 -599 1 1428 3608 110 155 96 chrX 110575387 110575507 -56074789 - Lx3B LINE L1 -86 5800 5723 1 1428 1137 68 0 0 chrX 110575507 110575654 -56074642 - B1_Mus1 SINE Alu 0 148 2 1 1428 3608 110 155 96 chrX 110575654 110576275 -56074021 - Lx3B LINE L1 -164 5722 5015 1 1428 326 123 0 17 chrX 110576276 110576334 -56073962 + (TTC)n Simple_repeat Simple_repeat 3 59 0 1 1428 1152 68 0 0 chrX 110576334 110576481 -56073815 - B1_Mus1 SINE Alu 0 148 2 1 1428 425 82 0 0 chrX 110576481 110576542 -56073754 - Lx3B LINE L1 -859 5027 4967 1 1428 196 432 9 0 chrX 110576586 110576697 -56073599 + MIRc SINE MIR 14 125 -143 1 1428 1702 16 0 0 chrX 110576848 110577040 -56073256 - B2_Mm1a SINE B2 0 193 2 1 1428 819 94 134 0 chrX 110578043 110578170 -56072126 - B1_Mus2 SINE Alu 0 147 4 1 1428 24 0 0 0 chrX 110580661 110580685 -56069611 + AT_rich Low_complexity Low_complexity 1 24 0 1 1428 684 35 0 0 chrX 110580719 110580806 -56069490 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 1428 1209 62 6 22 chrX 110580832 110581014 -56069282 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 1 1428 8418 148 19 14 chrX 110581018 110583316 -56066980 - Lx3_Mus LINE L1 -17 7033 5494 1 1428 539 356 25 46 chrX 110583608 110583849 -56066447 - B4A SINE B4 0 292 57 1 1428 5497 167 40 11 chrX 110584066 110585107 -56065189 - Lx2 LINE L1 0 6997 5926 1 1428 36755 27 0 7 chrX 110585613 110590675 -56059621 + L1Md_A LINE L1 567 5586 -297 1 1428 8270 37 0 0 chrX 110590675 110591668 -56058628 + L1Md_A LINE L1 5587 6579 -3 1 1428 21 0 0 0 chrX 110592002 110592023 -56058273 + AT_rich Low_complexity Low_complexity 1 21 0 1 1428 180 0 0 0 chrX 110593494 110593514 -56056782 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 1 1428 352 147 40 0 chrX 110594194 110594269 -56056027 - Lx3C LINE L1 -2 6974 6897 1 1428 198 0 0 0 chrX 110594611 110594633 -56055663 + (CATA)n Simple_repeat Simple_repeat 3 24 0 1 1428 373 213 72 24 chrX 110594636 110594761 -56055535 + Lx9 LINE L1 7513 7643 -1 1 1428 38 39 0 0 chrX 110595133 110595185 -56055111 + AT_rich Low_complexity Low_complexity 1 52 0 1 1428 223 375 56 22 chrX 110595602 110595782 -56054514 + MIRb SINE MIR 7 192 -76 1 1428 30 0 0 0 chrX 110598145 110598175 -56052121 + AT_rich Low_complexity Low_complexity 1 30 0 1 1428 528 120 67 17 chrX 110598176 110598295 -56052001 - Lx3A LINE L1 -7 6974 6850 1 1428 1666 293 80 49 chrX 110598924 110599774 -56050522 - Lx9 LINE L1 -5 7639 6764 1 1428 386 314 57 42 chrX 110599793 110599986 -56050310 - B3A SINE B2 0 198 3 1 1428 5859 70 23 6 chrX 110600678 110601489 -56048807 + L1Md_F2 LINE L1 5756 6580 -2 1 1428 289 302 94 0 chrX 110601507 110601613 -56048683 + PB1D10 SINE Alu 1 116 -1 1 1428 1070 64 0 0 chrX 110601810 110601951 -56048345 + L1_Mus1 LINE L1 6427 6567 0 1 1428 29 28 0 0 chrX 110602385 110602421 -56047875 + AT_rich Low_complexity Low_complexity 1 36 0 1 1428 650 231 0 0 chrX 110603253 110603374 -56046922 - RSINE1 SINE B4 -33 132 12 1 1428 46 33 0 0 chrX 110603454 110603514 -56046782 + AT_rich Low_complexity Low_complexity 1 60 0 1 1428 925 205 39 20 chrX 110603529 110603733 -56046563 - B3 SINE B2 -5 211 4 1 1428 203 311 81 75 chrX 110603906 110604066 -56046230 - MIRb SINE MIR -13 255 95 1 1428 1032 249 133 3 chrX 110604240 110604526 -56045770 - Lx6 LINE L1 -1 7459 7137 1 1428 561 15 0 0 chrX 110604697 110604763 -56045533 + (TC)n Simple_repeat Simple_repeat 1 66 0 1 1428 462 174 45 53 chrX 110604765 110604885 -56045411 - Lx6 LINE L1 -813 6883 6740 1 1428 7256 143 60 10 chrX 110604895 110607156 -56043140 - Lx3B LINE L1 -4 6969 4989 1 1428 290 304 66 15 chrX 110607238 110607375 -56042921 - Lx8 LINE L1 -78 7395 7252 1 1428 1052 87 0 0 chrX 110607908 110608046 -56042250 + B1_Mus2 SINE Alu 4 141 -6 1 1428 396 0 0 0 chrX 110608058 110608102 -56042194 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1 1428 216 272 0 0 chrX 110608130 110608184 -56042112 + B1F1 SINE Alu 11 64 -53 1 1428 501 32 0 0 chrX 110608371 110608434 -56041862 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 1428 369 0 0 0 chrX 110608434 110608474 -56041822 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1428 584 284 110 0 chrX 110608505 110608769 -56041527 + Lx9 LINE L1 7225 7517 -127 1 1428 554 61 30 20 chrX 110608769 110608870 -56041426 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 1 1428 223 346 139 16 chrX 110609033 110609162 -56041134 - L2a LINE L2 -251 3175 3031 1 1428 1248 62 6 0 chrX 110609313 110609489 -56040807 - L1Md_F2 LINE L1 -1 6581 6405 1 1428 14760 52 2 0 chrX 110610783 110613328 -56036968 - L1Md_F2 LINE L1 -13 6572 4025 1 1428 5438 114 107 23 chrX 110613323 110614710 -56035586 - L1Md_F2 LINE L1 -4227 1659 199 1 1428 1216 59 0 0 chrX 110615056 110615208 -56035088 - L1Md_F2 LINE L1 -461 6121 5970 1 1428 3379 73 10 30 chrX 110615208 110615699 -56034597 + L1Md_F2 LINE L1 6102 6582 0 1 1428 388 301 17 17 chrX 110615732 110615847 -56034449 + RSINE1 SINE B4 3 117 -48 1 1428 279 0 0 0 chrX 110615865 110615896 -56034400 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1428 507 102 0 0 chrX 110615896 110615984 -56034312 + (GA)n Simple_repeat Simple_repeat 1 88 0 1 1428 383 241 171 12 chrX 110618067 110618231 -56032065 - B2_Mm2 SINE B2 -5 190 1 1 1428 2742 170 26 19 chrX 110618408 110618973 -56031323 - Lx3C LINE L1 -399 6577 6009 1 1428 385 319 55 131 chrX 110619637 110619911 -56030385 - B4 SINE B4 0 292 37 1 1428 226 257 176 0 chrX 110620986 110621060 -56029236 + L1MA8 LINE L1 5544 5630 -682 1 1428 458 316 113 0 chrX 110621068 110621280 -56029016 + L1MB1 LINE L1 5758 5993 -175 1 1428 461 253 57 11 chrX 110621336 110621512 -56028784 + L1MA8 LINE L1 6104 6287 -4 1 1428 21 0 0 0 chrX 110622274 110622295 -56028001 + AT_rich Low_complexity Low_complexity 1 21 0 1 1428 3702 87 50 15 chrX 110622399 110622937 -56027359 - L1_Mus1 LINE L1 0 6567 6011 1 1428 4199 36 4 0 chrX 110623155 110623661 -56026635 - L1Md_T LINE L1 -2 6580 6073 1 178 29471 63 1 6 chrX 110623661 110628085 -56022211 - L1Md_T LINE L1 -894 4989 631 1 1429 239 351 84 19 chrX 110628345 110628464 -56021832 - Lx9 LINE L1 -2 7471 7341 1 1429 194 91 30 0 chrX 110628464 110628497 -56021799 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 1429 1954 292 130 32 chrX 110628497 110629517 -56020779 - Lx9 LINE L1 -219 7425 6347 1 1429 243 0 0 0 chrX 110629518 110629545 -56020751 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1429 984 112 0 0 chrX 110629619 110629753 -56020543 - Lx3C LINE L1 -572 6404 6271 1 1429 24718 118 7 90 chrX 110629842 110632067 -56018229 + L1_Mus1 LINE L1 1668 3907 -1976 1 1429 2109 56 0 0 chrX 110632067 110632335 -56017961 + L1Md_F2 LINE L1 6314 6581 -1 1 1429 24718 108 8 62 chrX 110632335 110632395 -56017901 + L1_Mus1 LINE L1 3908 3965 -2602 1 1429 1576 176 12 95 chrX 110632395 110632721 -56017575 + ORR1B1 LTR MaLR 41 339 -55 1 1429 24718 108 8 62 chrX 110632721 110635379 -56014917 + L1_Mus1 LINE L1 3966 6566 -1 1 1429 369 331 24 32 chrX 110637299 110637536 -56012760 - RMER15 LTR ERVL -158 417 64 1 1429 574 268 63 103 chrX 110637602 110637636 -56012660 - RMER15-int LTR ERVL -28 4971 4944 1 1429 594 0 0 0 chrX 110637636 110637702 -56012594 + (TC)n Simple_repeat Simple_repeat 1 66 0 1 1429 951 62 85 0 chrX 110637704 110637834 -56012462 - B1_Mm SINE Alu -6 141 1 1 1429 574 268 63 103 chrX 110637834 110638096 -56012200 - RMER15-int LTR ERVL -56 4943 4684 1 1429 852 311 19 12 chrX 110638121 110638378 -56011918 - RMER15-int LTR ERVL -373 4626 4368 1 1429 252 275 12 36 chrX 110638495 110638578 -56011718 + MTC LTR MaLR 13 93 -328 1 1429 2918 78 0 0 chrX 110638598 110638971 -56011325 - L1Md_F2 LINE L1 0 5883 5511 1 1429 4944 68 9 2 chrX 110638971 110639615 -56010681 + L1Md_F2 LINE L1 5934 6582 0 1 1429 374 323 70 40 chrX 110640153 110640353 -56009943 - RMER15 LTR ERVL -21 554 349 1 1429 279 0 0 0 chrX 110640697 110640728 -56009568 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 1429 343 338 109 15 chrX 110641029 110641230 -56009066 + MIRb SINE MIR 26 245 -23 1 1429 21 36 0 0 chrX 110641428 110641456 -56008840 + AT_rich Low_complexity Low_complexity 1 28 0 1 1429 27 49 0 0 chrX 110641816 110641857 -56008439 + AT_rich Low_complexity Low_complexity 1 41 0 1 1429 30 59 0 0 chrX 110642121 110642172 -56008124 + AT_rich Low_complexity Low_complexity 1 51 0 1 1429 276 186 0 0 chrX 110644846 110644905 -56005391 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1429 270 365 26 31 chrX 110644922 110645038 -56005258 - PB1D10 SINE Alu 0 117 5 1 1429 2137 161 189 9 chrX 110645217 110645667 -56004629 + L1Md_A LINE L1 6052 6582 0 1 1429 432 335 90 0 chrX 110645667 110645822 -56004474 - B4A SINE B4 -78 214 46 1 1429 373 293 33 20 chrX 110645946 110646099 -56004197 - L1MB1 LINE L1 -109 6059 5905 1 1429 929 178 129 102 chrX 110647556 110647881 -56002415 - Lx9 LINE L1 -11 7633 7300 1 1429 344 244 24 63 chrX 110648032 110648145 -56002151 - Lx6 LINE L1 -27 7433 7325 1 1429 198 0 0 0 chrX 110648145 110648167 -56002129 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 1 1429 344 244 24 63 chrX 110648167 110648180 -56002116 - Lx6 LINE L1 -136 7324 7312 1 1429 630 147 8 15 chrX 110648182 110648304 -56001992 + GA-rich Low_complexity Low_complexity 2 123 0 1 1429 1466 22 0 16 chrX 110648304 110648487 -56001809 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 1 1429 21 0 0 0 chrX 110648562 110648583 -56001713 + AT_rich Low_complexity Low_complexity 1 21 0 1 1429 392 218 22 22 chrX 110648662 110648751 -56001545 - MTC LTR MaLR -325 96 8 1 1429 542 309 98 68 chrX 110648744 110648852 -56001444 + B4 SINE B4 11 103 -189 2 1429 950 116 0 27 chrX 110648852 110649002 -56001294 - B1_Mus2 SINE Alu -1 146 1 2 1429 542 309 98 68 chrX 110649002 110649157 -56001139 + B4 SINE B4 104 282 -10 2 1429 720 111 0 0 chrX 110649183 110649291 -56001005 + (TA)n Simple_repeat Simple_repeat 1 108 0 2 1429 306 262 143 0 chrX 110649756 110649840 -56000456 + RSINE1 SINE B4 2 97 -68 2 1429 463 358 43 5 chrX 110650259 110650447 -55999849 - MER63A DNA AcHobo -7 203 9 2 1429 471 228 181 21 chrX 110650470 110650663 -55999633 + Lx8 LINE L1 6882 7105 -368 2 1429 243 0 0 0 chrX 110650663 110650690 -55999606 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1429 630 333 14 0 chrX 110650690 110650897 -55999399 + Lx8 LINE L1 7127 7336 -137 2 1429 951 230 29 10 chrX 110652717 110652923 -55997373 + B3 SINE B2 7 216 0 2 1429 222 118 0 0 chrX 110653016 110653050 -55997246 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 2 1429 352 284 101 34 chrX 110653495 110653732 -55996564 - L1M2 LINE L1 -770 5521 5269 2 1429 330 273 68 12 chrX 110653830 110653993 -55996303 - L1M2 LINE L1 -1294 4849 4678 2 1429 615 314 72 108 chrX 110654204 110654539 -55995757 - MLT1B LTR MaLR -46 344 22 2 1429 5553 108 47 2 chrX 110655059 110655897 -55994399 - Lx3A LINE L1 -8 6973 6099 2 1429 245 253 92 92 chrX 110655899 110656008 -55994288 - Lx8 LINE L1 -111 7362 7254 2 1429 317 291 102 8 chrX 110656011 110656129 -55994167 + Lx8 LINE L1 7063 7191 -282 2 1429 1108 69 0 14 chrX 110656731 110656878 -55993418 - B1_Mm SINE Alu -1 146 2 2 1429 1252 255 55 14 chrX 110657836 110658198 -55992098 - Lx7 LINE L1 -526 7170 6794 2 1429 1055 101 0 0 chrX 110658294 110658433 -55991863 + B1_Mus2 SINE Alu 1 139 -8 2 1429 224 30 0 29 chrX 110658442 110658476 -55991820 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 2 1429 21 0 0 0 chrX 110660846 110660867 -55989429 + AT_rich Low_complexity Low_complexity 1 21 0 2 1429 192 111 0 0 chrX 110663074 110663110 -55987186 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1429 14802 69 1 5 chrX 110663173 110665130 -55985166 + L1Md_F2 LINE L1 3665 5615 -268 2 1429 6087 57 65 4 chrX 110665131 110665940 -55984356 + L1Md_F2 LINE L1 5711 6569 -13 2 1429 3915 65 70 16 chrX 110665952 110666497 -55983799 + L1Md_F2 LINE L1 6005 6578 -4 2 1429 4963 80 72 36 chrX 110666705 110667456 -55982840 - L1_Mus4 LINE L1 -12 6624 5847 2 1429 3571 131 54 12 chrX 110667456 110668051 -55982245 + L1_Mus4 LINE L1 5210 5829 -54 2 1429 526 326 21 0 chrX 110668603 110668744 -55981552 + RSINE1 SINE B4 3 146 -19 2 1429 26 0 0 0 chrX 110668760 110668786 -55981510 + AT_rich Low_complexity Low_complexity 1 26 0 2 1429 201 133 0 0 chrX 110671126 110671156 -55979140 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 2 1429 195 42 0 0 chrX 110671542 110671566 -55978730 + (TA)n Simple_repeat Simple_repeat 1 24 0 2 1429 240 374 145 6 chrX 110671804 110671976 -55978320 - MIRb SINE MIR -18 250 55 2 1429 513 256 136 0 chrX 110672073 110672249 -55978047 - Lx5 LINE L1 -11 7039 6840 2 1429 195 42 0 0 chrX 110673174 110673198 -55977098 + (TA)n Simple_repeat Simple_repeat 1 24 0 2 1429 609 52 0 0 chrX 110673198 110673274 -55977022 + (GAAA)n Simple_repeat Simple_repeat 4 80 0 2 1429 2205 254 17 2 chrX 110673507 110674023 -55976273 - Lx5 LINE L1 0 7050 6527 2 1429 28 91 0 0 chrX 110674675 110674752 -55975544 + AT_rich Low_complexity Low_complexity 1 77 0 2 1429 23 0 0 0 chrX 110674831 110674854 -55975442 + AT_rich Low_complexity Low_complexity 1 23 0 2 1429 416 70 0 0 chrX 110674854 110674911 -55975385 - B1_Mur4 SINE Alu 0 150 94 2 1429 24 32 0 0 chrX 110674911 110674942 -55975354 + AT_rich Low_complexity Low_complexity 1 31 0 2 1429 545 342 42 73 chrX 110675087 110675443 -55974853 - Lx7 LINE L1 -416 7280 6936 2 1429 1388 267 241 10 chrX 110675524 110675843 -55974453 - L1_Mur3 LINE L1 -10 5870 5434 2 1429 429 36 0 0 chrX 110675843 110675898 -55974398 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1429 1388 267 241 10 chrX 110675898 110676275 -55974021 - L1_Mur3 LINE L1 -447 5433 5014 2 1429 233 316 0 0 chrX 110676837 110676894 -55973402 - ID SINE ID -146 78 22 2 1429 312 91 0 0 chrX 110677145 110677189 -55973107 + (TCC)n Simple_repeat Simple_repeat 2 45 0 2 1429 9297 118 30 11 chrX 110678223 110680331 -55969965 + L1Md_F LINE L1 442 2591 -3292 2 1429 7338 72 12 1 chrX 110680326 110681293 -55969003 + L1_Mus2 LINE L1 5587 6564 -2 2 1429 520 84 21 21 chrX 110681293 110681390 -55968906 + L1Md_F2 LINE L1 6486 6582 0 2 1429 288 336 58 0 chrX 110681767 110681871 -55968425 + PB1D7 SINE Alu 1 110 -10 2 1429 346 253 0 0 chrX 110681848 110681923 -55968373 + B4A SINE B4 195 269 -23 2 1429 278 375 0 0 chrX 110682145 110682249 -55968047 - B1F SINE Alu -45 104 1 2 1429 402 21 0 0 chrX 110682554 110682601 -55967695 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 1429 358 61 20 0 chrX 110682738 110682787 -55967509 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 1429 809 199 6 0 chrX 110682788 110682964 -55967332 + CT-rich Low_complexity Low_complexity 2 178 0 2 1429 226 289 56 56 chrX 110683027 110683170 -55967126 + Lx8 LINE L1 7007 7149 -324 2 1429 234 245 0 0 chrX 110683174 110683272 -55967024 + (TA)n Simple_repeat Simple_repeat 2 99 0 2 1429 244 250 44 33 chrX 110683573 110683664 -55966632 - MTEa LTR MaLR -13 366 275 2 1429 406 311 50 86 chrX 110683795 110684085 -55966211 - MLT-int LTR MaLR -804 567 261 2 1429 186 336 82 7 chrX 110684642 110684783 -55965513 + MIRb SINE MIR 76 231 -37 2 1429 432 322 21 0 chrX 110685138 110685281 -55965015 - RSINE1 SINE B4 -17 148 3 2 1429 712 340 57 0 chrX 110686802 110687049 -55963247 + MTEb LTR MaLR 3 263 -116 2 1429 243 222 19 0 chrX 110687076 110687130 -55963166 + ID_B1 SINE B4 170 224 0 2 1429 905 322 178 46 chrX 110687221 110687804 -55962492 + MTE-int LTR MaLR 504 1163 -417 2 1429 1072 102 0 0 chrX 110688233 110688380 -55961916 + B1_Mm SINE Alu 1 147 0 2 1429 287 65 22 0 chrX 110688418 110688464 -55961832 + (CAA)n Simple_repeat Simple_repeat 2 48 0 2 1429 298 321 90 18 chrX 110688589 110688700 -55961596 + B3A SINE B2 1 119 -79 2 1429 363 299 73 15 chrX 110688723 110688859 -55961437 + B3 SINE B2 73 216 0 2 1429 261 57 0 0 chrX 110688914 110688949 -55961347 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1429 7019 78 17 7 chrX 110689239 110690233 -55960063 - Lx3_Mus LINE L1 0 7009 6006 2 1429 238 152 34 0 chrX 110691204 110691263 -55959033 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 1429 306 0 0 0 chrX 110691337 110691371 -55958925 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 1429 2246 314 80 32 chrX 110692223 110692409 -55957887 - Lx9 LINE L1 -27 7617 7423 2 1429 621 0 0 0 chrX 110692409 110692478 -55957818 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 2 1429 2246 314 80 32 chrX 110692478 110693158 -55957138 - Lx9 LINE L1 -222 7422 6703 2 1429 2172 57 0 7 chrX 110693158 110693443 -55956853 + L1_Mus2 LINE L1 6283 6565 -1 2 1429 2246 314 80 32 chrX 110693443 110693738 -55956558 - Lx9 LINE L1 -942 6702 6399 2 1429 270 179 0 0 chrX 110695135 110695191 -55955105 + A-rich Low_complexity Low_complexity 1 56 0 2 1429 213 39 0 0 chrX 110695666 110695692 -55954604 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1429 743 315 76 18 chrX 110695713 110695799 -55954497 - Lx8 LINE L1 -28 7445 7349 2 1429 622 271 7 0 chrX 110695799 110695939 -55954357 - B1_Mur2 SINE Alu -7 142 2 2 1429 743 315 76 18 chrX 110695939 110696298 -55953998 - Lx8 LINE L1 -125 7348 6975 2 1429 22 0 0 0 chrX 110697621 110697643 -55952653 + AT_rich Low_complexity Low_complexity 1 22 0 2 1429 5061 145 58 10 chrX 110697973 110698878 -55951418 - Lx4A LINE L1 -1 7057 6110 2 1429 22 56 0 0 chrX 110699638 110699674 -55950622 + AT_rich Low_complexity Low_complexity 1 36 0 2 1429 183 188 0 0 chrX 110700403 110700451 -55949845 + (CACCAT)n Simple_repeat Simple_repeat 4 51 0 2 1429 270 0 0 0 chrX 110701365 110701395 -55948901 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1429 183 297 75 47 chrX 110702699 110702805 -55947491 + MIR SINE MIR 93 201 -61 2 1429 830 386 35 50 chrX 110702853 110703316 -55946980 - MLT2B2 LTR ERVL -59 456 1 2 1429 383 86 0 0 chrX 110706734 110706792 -55943504 + L1_Mus1 LINE L1 6079 6136 -431 2 1429 3892 60 0 4 chrX 110706792 110707280 -55943016 + L1_Mus2 LINE L1 6080 6565 -1 2 1429 301 200 94 17 chrX 110707334 110707451 -55942845 + Lx9 LINE L1 7517 7642 -2 2 1429 721 329 37 34 chrX 110707556 110707880 -55942416 - RLTR23 LTR ERV1 -2 428 104 2 1429 387 200 10 59 chrX 110707967 110708068 -55942228 - RLTR23 LTR ERV1 -327 103 8 2 1429 597 340 7 0 chrX 110708128 110708272 -55942024 - B3 SINE B2 -70 146 2 2 1429 850 131 6 56 chrX 110708393 110708571 -55941725 + L1Md_F2 LINE L1 6410 6578 -4 2 1429 26 82 0 0 chrX 110709875 110709936 -55940360 + AT_rich Low_complexity Low_complexity 1 61 0 2 1429 4447 266 104 80 chrX 110710402 110711075 -55939221 - Lx7 LINE L1 -289 7407 6672 2 1429 825 87 0 0 chrX 110711075 110711190 -55939106 + (GAAAA)n Simple_repeat Simple_repeat 5 119 0 2 1429 4447 266 104 80 chrX 110711190 110712284 -55938012 - Lx7 LINE L1 -1025 6671 5597 2 1429 2444 267 90 74 chrX 110712311 110713545 -55936751 + MTD-int LTR MaLR 1 1254 -4 2 1429 1475 252 55 10 chrX 110713549 110713950 -55936346 + MTD LTR MaLR 1 419 0 2 1429 320 328 48 48 chrX 110714219 110714408 -55935888 - L1MCa LINE L1 -6292 216 28 2 1429 353 316 19 19 chrX 110714408 110714569 -55935727 - L1M4 LINE L1 -734 5450 5290 2 1429 319 219 63 24 chrX 110714611 110714737 -55935559 - L1M4 LINE L1 -1713 4433 4303 2 1429 347 304 92 49 chrX 110714786 110714928 -55935368 - L1M4 LINE L1 -2391 3755 3608 2 1429 825 237 53 0 chrX 110714964 110715154 -55935142 + Lx9 LINE L1 7037 7236 -408 2 1429 1009 67 0 7 chrX 110715166 110715316 -55934980 - MusHAL1 LINE L1 -6 2706 2558 2 1429 6947 143 19 15 chrX 110715312 110717024 -55933272 - L1_Mus2 LINE L1 0 7000 5243 2 1429 40727 12 2 6 chrX 110717021 110723374 -55926922 - L1Md_A LINE L1 0 6582 260 2 1429 23437 136 17 5 chrX 110723371 110725794 -55924502 - L1_Mus2 LINE L1 -628 5255 2811 2 1429 456 19 0 0 chrX 110725794 110725847 -55924449 + (TTA)n Simple_repeat Simple_repeat 1 53 0 2 1429 23437 145 19 7 chrX 110725847 110727969 -55922327 - L1_Mus2 LINE L1 -3073 2810 651 2 1429 320 335 73 55 chrX 110728997 110729161 -55921135 - B3A SINE B2 0 198 32 2 1429 2887 55 0 6 chrX 110729896 110730259 -55920037 - L1Md_F3 LINE L1 -16 6568 6208 2 1429 258 105 0 0 chrX 110730517 110730555 -55919741 + (CTA)n Simple_repeat Simple_repeat 1 38 0 2 1429 254 333 41 35 chrX 110731416 110731587 -55918709 - Lx9 LINE L1 -1676 5968 5797 3 1429 1737 326 62 30 chrX 110731613 110731987 -55918309 + Lx8 LINE L1 6561 6947 -526 3 1429 1664 146 88 79 chrX 110731987 110732330 -55917966 + ORR1A1 LTR MaLR 1 346 0 3 1429 1737 326 62 30 chrX 110732330 110732809 -55917487 + Lx8 LINE L1 6948 7440 -33 3 1429 213 39 0 0 chrX 110734208 110734234 -55916062 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 3 1429 570 231 0 78 chrX 110734244 110734385 -55915911 - B1_Mus2 SINE Alu 0 147 18 3 1429 809 81 0 8 chrX 110734600 110734724 -55915572 + (TTTTC)n Simple_repeat Simple_repeat 3 125 0 3 1429 517 191 43 0 chrX 110735085 110735200 -55915096 + ID_B1 SINE B4 96 215 -9 3 1429 1092 193 36 29 chrX 110735201 110735445 -55914851 - Lx4B LINE L1 -339 6719 6477 3 1429 33 0 0 0 chrX 110736096 110736129 -55914167 + AT_rich Low_complexity Low_complexity 1 33 0 3 1429 23 68 0 0 chrX 110736451 110736495 -55913801 + AT_rich Low_complexity Low_complexity 1 44 0 3 1429 5077 50 2 0 chrX 110739027 110739650 -55910646 - L1Md_T LINE L1 0 6582 5959 3 1429 333 254 69 48 chrX 110740179 110740324 -55909972 + Lx5 LINE L1 6900 7047 -3 3 1429 245 49 0 0 chrX 110742456 110742497 -55907799 - L1_Mus2 LINE L1 0 6566 6526 3 1429 335 303 13 0 chrX 110743143 110743219 -55907077 + PB1D7 SINE Alu 36 112 -8 3 1429 25 31 0 0 chrX 110743674 110743706 -55906590 + AT_rich Low_complexity Low_complexity 1 32 0 3 1429 1431 47 0 20 chrX 110743706 110743901 -55906395 - L1Md_F2 LINE L1 -4 6578 6388 3 1429 2772 209 84 3 chrX 110744733 110745338 -55904958 - Lx2B LINE L1 -2 6998 6345 3 1429 562 329 68 16 chrX 110745420 110745702 -55904594 - Lx9 LINE L1 -305 7339 6911 3 1429 25 31 0 0 chrX 110746425 110746457 -55903839 + AT_rich Low_complexity Low_complexity 1 32 0 3 1429 366 289 128 62 chrX 110747037 110747253 -55903043 + L1M3 LINE L1 4867 5102 -1038 3 1429 479 109 43 0 chrX 110747253 110747345 -55902951 + L1_Mus3 LINE L1 6535 6630 -8 3 1429 366 289 128 62 chrX 110747345 110747534 -55902762 + L1M3 LINE L1 5103 5299 -841 3 1429 1130 64 0 0 chrX 110747699 110747839 -55902457 + B1_Mm SINE Alu 5 144 -3 3 1429 849 84 0 0 chrX 110747839 110747958 -55902338 + (GAAA)n Simple_repeat Simple_repeat 2 120 0 3 1429 300 318 12 72 chrX 110747972 110748138 -55902158 + L1ME1 LINE L1 5779 5934 -245 3 1429 2581 61 0 9 chrX 110748331 110748662 -55901634 - L1_Mus1 LINE L1 -3 6564 6237 3 1429 214 254 7 68 chrX 110748678 110748826 -55901470 + A-rich Low_complexity Low_complexity 3 141 0 3 1429 1117 259 132 0 chrX 110748846 110749135 -55901161 - Lx7 LINE L1 -460 7236 6910 3 1429 27 0 0 0 chrX 110749355 110749382 -55900914 + AT_rich Low_complexity Low_complexity 1 27 0 3 1429 1886 312 32 10 chrX 110749484 110750176 -55900120 - Lx8 LINE L1 -511 6962 6256 3 1429 917 332 34 0 chrX 110750174 110750466 -55899830 + Lx8 LINE L1 6992 7293 -180 3 1429 397 269 0 132 chrX 110750472 110750639 -55899657 + Lx9 LINE L1 7202 7346 -298 3 1429 24 53 0 0 chrX 110750931 110750969 -55899327 + AT_rich Low_complexity Low_complexity 1 38 0 3 1429 2517 288 119 25 chrX 110750969 110752107 -55898189 - Lx9 LINE L1 0 7644 6399 3 1429 189 0 0 0 chrX 110752117 110752138 -55898158 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 1429 3198 214 38 16 chrX 110752342 110753162 -55897134 - Lx4B LINE L1 -35 7015 6132 3 1429 387 0 0 0 chrX 110753833 110753876 -55896420 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1429 3751 55 0 39 chrX 110754709 110755203 -55895093 - MT2C_Mm LTR ERVL 0 475 1 3 178 1975 213 86 11 chrX 110755638 110756093 -55894203 + Lx2B LINE L1 6500 6988 -12 3 1430 29 78 0 0 chrX 110756567 110756631 -55893665 + AT_rich Low_complexity Low_complexity 1 64 0 3 1430 3342 20 35 2 chrX 110756649 110757048 -55893248 - L1Md_F3 LINE L1 -2 6582 6171 3 1430 304 156 15 45 chrX 110757048 110757115 -55893181 + L1Md_F3 LINE L1 6133 6197 -387 3 1430 203 171 0 0 chrX 110758137 110758178 -55892118 + T-rich Low_complexity Low_complexity 1 41 0 3 1430 218 306 12 0 chrX 110758213 110758298 -55891998 + (TG)n Simple_repeat Simple_repeat 1 86 0 3 1430 4150 194 73 71 chrX 110758299 110759234 -55891062 + RMER1A Other Other 1 881 -149 3 1430 180 0 0 0 chrX 110759234 110759254 -55891042 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 1430 4150 192 73 71 chrX 110759254 110759343 -55890953 + RMER1A Other Other 882 1003 -27 3 1430 1093 281 108 3 chrX 110759674 110760009 -55890287 - ORR1D1 LTR MaLR -4 370 1 3 1430 10731 79 9 3 chrX 110760115 110762253 -55888043 - L1Md_F2 LINE L1 -1 6581 4430 3 1430 2714 90 29 0 chrX 110762250 110762629 -55887667 - L1_Mus2 LINE L1 -247 6319 5930 3 1430 2403 48 36 0 chrX 110762611 110762920 -55887376 + L1_Mus2 LINE L1 5625 5944 -622 3 1430 899 109 0 0 chrX 110763138 110763275 -55887021 - L1_Mus2 LINE L1 -2 6564 6428 3 1430 941 55 0 8 chrX 110763564 110763693 -55886603 + (TTC)n Simple_repeat Simple_repeat 2 129 0 3 1430 22657 12 0 0 chrX 110763702 110766973 -55883323 - L1Md_A LINE L1 -1 6581 3310 3 1430 1103 90 14 0 chrX 110766976 110767121 -55883175 - B1_Mus1 SINE Alu 0 148 2 3 1430 473 47 16 0 chrX 110767121 110767185 -55883111 + (TCC)n Simple_repeat Simple_repeat 3 67 0 3 1430 228 143 0 0 chrX 110767206 110767248 -55883048 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 1430 29 28 0 0 chrX 110767255 110767291 -55883005 + AT_rich Low_complexity Low_complexity 1 36 0 3 1430 896 243 26 161 chrX 110767293 110767354 -55882942 - Lx7 LINE L1 -56 7640 7580 3 1430 6388 42 2 6 chrX 110767354 110768146 -55882150 + L1Md_F2 LINE L1 5791 6579 -3 3 1430 896 243 26 161 chrX 110768146 110768462 -55881834 - Lx7 LINE L1 -117 7579 7302 3 1430 2260 53 0 84 chrX 110768462 110768794 -55881502 + L1_Mus1 LINE L1 6264 6567 0 3 1430 896 243 26 161 chrX 110768794 110768905 -55881391 - Lx7 LINE L1 -395 7301 7217 3 1430 2432 243 125 40 chrX 110768894 110769247 -55881049 - Lx7 LINE L1 -1190 6506 6153 3 1430 4438 41 0 2 chrX 110769247 110769782 -55880514 - L1Md_F3 LINE L1 -1 6583 6050 3 1430 3988 213 73 17 chrX 110769782 110770965 -55879331 - Lx7 LINE L1 -1544 6152 4870 3 1430 24 32 0 0 chrX 110771259 110771290 -55879006 + AT_rich Low_complexity Low_complexity 1 31 0 3 1430 22 0 0 0 chrX 110771412 110771434 -55878862 + AT_rich Low_complexity Low_complexity 1 22 0 3 1430 6831 57 1 3 chrX 110771949 110772807 -55877489 - L1Md_F2 LINE L1 -12 6570 5715 3 1430 6128 87 2 25 chrX 110772905 110773779 -55876517 - L1_Mus2 LINE L1 0 6566 5713 3 1430 892 111 14 0 chrX 110773771 110773915 -55876381 + L1_Mur2 LINE L1 3942 4087 -1790 3 1430 552 349 34 57 chrX 110773918 110774325 -55875971 - Lx9 LINE L1 -289 7355 6958 3 1430 289 326 15 8 chrX 110774334 110774464 -55875832 + Lx9 LINE L1 6789 6919 -725 3 1430 311 346 49 30 chrX 110775302 110775466 -55874830 - L3 LINE CR1 -1130 3359 3193 3 1430 303 164 0 0 chrX 110775727 110775788 -55874508 + GA-rich Low_complexity Low_complexity 2 62 0 3 1430 553 390 33 30 chrX 110776863 110777196 -55873100 - RCHARR1 DNA MER1_type -631 343 10 3 1430 627 209 7 14 chrX 110777481 110777622 -55872674 + Lx4A LINE L1 6918 7057 -1 3 1430 30 0 0 0 chrX 110779409 110779439 -55870857 + AT_rich Low_complexity Low_complexity 1 30 0 3 1430 387 0 0 0 chrX 110780500 110780543 -55869753 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1430 32318 83 4 9 chrX 110781241 110786387 -55863909 + L1Md_F2 LINE L1 467 5585 -298 3 1430 7445 65 21 0 chrX 110786388 110787351 -55862945 + L1Md_F2 LINE L1 5587 6569 -13 3 1430 30 0 0 0 chrX 110787781 110787811 -55862485 + AT_rich Low_complexity Low_complexity 1 30 0 3 1430 1480 79 27 18 chrX 110787815 110788034 -55862262 - L1_Mus2 LINE L1 0 6566 6346 3 1430 348 74 0 100 chrX 110788034 110788094 -55862202 - L1_Mus2 LINE L1 -398 6168 6115 3 1430 22 35 0 0 chrX 110788238 110788267 -55862029 + AT_rich Low_complexity Low_complexity 1 29 0 3 1430 202 306 0 0 chrX 110788299 110788361 -55861935 + GA-rich Low_complexity Low_complexity 4 65 0 3 1430 7583 35 14 3 chrX 110788998 110789923 -55860373 + L1Md_F2 LINE L1 5647 6581 -1 3 1430 944 69 35 0 chrX 110789926 110790071 -55860225 + L1_Mus2 LINE L1 6416 6565 -1 3 1430 672 291 48 11 chrX 110791745 110791937 -55858359 - B3 SINE B2 -4 212 17 3 1430 2769 45 17 0 chrX 110791980 110792337 -55857959 - L1Md_F2 LINE L1 0 6582 6220 3 1430 199 291 103 11 chrX 110792427 110792514 -55857782 - MIRc SINE MIR -20 248 154 3 1430 267 212 0 12 chrX 110792879 110792965 -55857331 - Lx5 LINE L1 -1 7049 6965 3 1430 596 194 8 0 chrX 110794457 110794591 -55855705 + (TA)n Simple_repeat Simple_repeat 2 136 0 3 1430 3860 242 97 18 chrX 110794617 110795740 -55854556 - Lx9 LINE L1 -196 7448 6237 3 1430 2751 52 9 0 chrX 110795902 110796245 -55854051 - ORR1A1 LTR MaLR 0 346 1 3 1430 779 119 8 0 chrX 110796737 110796863 -55853433 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 3 1430 1080 85 0 0 chrX 110796866 110797007 -55853289 - B1_Mus2 SINE Alu -6 141 1 3 1430 31 0 0 0 chrX 110797314 110797345 -55852951 + AT_rich Low_complexity Low_complexity 1 31 0 3 1430 218 302 50 30 chrX 110798283 110798382 -55851914 - MIR3 SINE MIR -7 201 101 3 1430 35 71 0 0 chrX 110798514 110798584 -55851712 + AT_rich Low_complexity Low_complexity 1 70 0 3 1430 1127 62 0 7 chrX 110798755 110798902 -55851394 + B1_Mm SINE Alu 2 147 0 3 1430 207 114 0 0 chrX 110798916 110798951 -55851345 + (A)n Simple_repeat Simple_repeat 1 35 0 3 1430 408 86 57 0 chrX 110799425 110799495 -55850801 + Lx2B LINE L1 6926 6999 -1 3 1430 633 312 68 0 chrX 110799556 110799748 -55850548 + MER3 DNA MER1_type 5 209 0 3 1430 2135 90 32 10 chrX 110802244 110802557 -55847739 - L1Md_F2 LINE L1 -10 6572 6253 3 1430 5907 33 1 0 chrX 110802634 110803340 -55846956 + L1Md_T LINE L1 5876 6582 0 3 1430 279 0 0 0 chrX 110803359 110803390 -55846906 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1430 522 0 0 0 chrX 110803438 110803496 -55846800 + (TAAA)n Simple_repeat Simple_repeat 2 59 0 3 1430 3131 54 3 0 chrX 110803496 110803884 -55846412 - L1_Mm LINE L1 -206 5677 5289 3 1430 1111 245 32 6 chrX 110803935 110804247 -55846049 + Lx4B LINE L1 6718 7037 -21 3 1430 324 0 0 0 chrX 110804247 110804283 -55846013 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 3 1430 320 370 101 10 chrX 110804928 110805150 -55845146 - MIRb SINE MIR -18 250 6 4 1430 36 23 0 0 chrX 110805883 110805926 -55844370 + AT_rich Low_complexity Low_complexity 1 43 0 4 1430 793 262 79 4 chrX 110807298 110807577 -55842719 - L1_Mur3 LINE L1 -1643 4237 3938 4 1430 505 293 75 8 chrX 110807587 110807721 -55842575 + RSINE1 SINE B4 3 145 -20 4 1430 26 0 0 0 chrX 110808280 110808306 -55841990 + AT_rich Low_complexity Low_complexity 1 26 0 4 1430 27 0 0 0 chrX 110808710 110808737 -55841559 + AT_rich Low_complexity Low_complexity 1 27 0 4 1430 819 88 0 0 chrX 110809141 110809254 -55841042 + B1_Mm SINE Alu 35 147 0 4 1430 331 212 0 0 chrX 110809307 110809387 -55840909 + Lx3A LINE L1 6899 6978 -3 4 1430 201 94 0 0 chrX 110809389 110809421 -55840875 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 4 1430 1127 258 73 18 chrX 110810340 110810803 -55839493 - L1_Rod LINE L1 -2402 3738 3243 4 1430 686 62 0 10 chrX 110810803 110810900 -55839396 + (TCTCC)n Simple_repeat Simple_repeat 3 98 0 4 1430 902 316 60 19 chrX 110810900 110810953 -55839343 - L1_Rod LINE L1 -2885 3255 3201 4 1430 25 0 0 0 chrX 110811191 110811216 -55839080 + AT_rich Low_complexity Low_complexity 1 25 0 4 1430 3944 180 43 21 chrX 110811217 110812039 -55838257 - Lx3C LINE L1 -2 6974 6135 4 1430 470 245 355 96 chrX 110812039 110812219 -55838077 - L1_Rod LINE L1 -2600 3247 3018 4 1430 812 93 28 7 chrX 110812219 110812360 -55837936 - L1_Mus4 LINE L1 -3 6633 6490 4 1430 470 271 93 126 chrX 110812360 110812749 -55837547 - L1_Rod LINE L1 -2830 3017 2644 4 1430 489 252 125 16 chrX 110812748 110813051 -55837245 - L1_Rod LINE L1 -3707 2140 1805 4 1430 405 127 0 0 chrX 110813067 110813146 -55837150 + (TCTCTG)n Simple_repeat Simple_repeat 4 82 0 4 1430 34 24 0 0 chrX 110813147 110813188 -55837108 + AT_rich Low_complexity Low_complexity 1 41 0 4 1430 2825 127 9 5 chrX 110813190 110813633 -55836663 - Lx3A LINE L1 -2 6979 6535 4 1430 5065 100 9 5 chrX 110813633 110814384 -55835912 - L1_Mur1 LINE L1 -182 5704 4951 4 1430 1074 216 97 24 chrX 110814401 110814699 -55835597 - L1_Rod LINE L1 -4043 1804 1480 4 1430 1352 207 192 19 chrX 110814699 110815058 -55835238 + MTC LTR MaLR 1 421 0 4 1430 1074 216 97 24 chrX 110815058 110815100 -55835196 - L1_Rod LINE L1 -4368 1479 1439 4 1430 2773 214 84 53 chrX 110815113 110815931 -55834365 - Lx9 LINE L1 -2 7642 6799 4 1430 1149 185 229 23 chrX 110815933 110816386 -55833910 + RLTR20A2 LTR ERVK 1 551 0 4 1430 1723 295 45 19 chrX 110816394 110817085 -55833211 - Lx9 LINE L1 -866 6778 5941 4 1430 354 23 0 0 chrX 110817085 110817128 -55833168 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 4 1430 620 342 73 55 chrX 110817128 110817252 -55833044 - Lx9 LINE L1 -1533 5940 5808 4 1430 964 263 22 16 chrX 110817245 110817729 -55832567 - L1_Rod LINE L1 -4406 1441 952 4 1430 228 353 78 47 chrX 110819525 110819718 -55830578 + B4A SINE B4 48 246 -46 4 1430 216 0 0 0 chrX 110819718 110819742 -55830554 + (GGA)n Simple_repeat Simple_repeat 1 24 0 4 1430 1191 56 0 4 chrX 110819742 110819973 -55830323 + (GAA)n Simple_repeat Simple_repeat 1 230 0 4 1430 325 297 83 5 chrX 110820083 110820276 -55830020 + L1MC2 LINE L1 830 1037 -5471 4 1430 6438 199 111 15 chrX 110820347 110820644 -55829652 + L1_Mur3 LINE L1 3509 3813 -2067 4 1430 1079 95 7 0 chrX 110820644 110820791 -55829505 + B1_Mus1 SINE Alu 1 148 0 4 1430 6438 199 111 15 chrX 110820791 110822191 -55828105 + L1_Mur3 LINE L1 3814 5368 -512 4 1430 3348 213 38 22 chrX 110822246 110822957 -55827339 + Lx6 LINE L1 6266 6987 -473 4 1430 366 213 43 96 chrX 110822955 110823142 -55827154 + Lx7 LINE L1 7372 7548 -148 4 1430 3233 210 11 5 chrX 110824093 110824753 -55825543 + Lx2B LINE L1 6337 7000 0 4 1430 630 26 0 0 chrX 110824954 110825030 -55825266 + (TG)n Simple_repeat Simple_repeat 2 77 0 4 1430 351 297 56 66 chrX 110825215 110825413 -55824883 + L1MC2 LINE L1 2163 2358 -4150 4 1430 681 287 151 70 chrX 110825545 110826996 -55823300 + L1MC2 LINE L1 2351 3918 -2403 4 1430 348 24 0 0 chrX 110827240 110827281 -55823015 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 1430 1586 199 81 12 chrX 110827363 110827811 -55822485 - Lx4B LINE L1 -816 6242 5719 4 1430 10213 137 13 15 chrX 110827780 110830345 -55819951 - L1_Mus4 LINE L1 -9 6627 4070 4 1430 318 318 115 17 chrX 110830366 110830774 -55819522 + L1MC2 LINE L1 5488 5943 -2017 4 1430 10133 38 1 3 chrX 110830864 110832770 -55817526 - L1Md_F2 LINE L1 0 6582 4682 4 1430 704 128 8 23 chrX 110832773 110832901 -55817395 - L1_Mur1 LINE L1 -486 5400 5275 4 1430 3902 135 28 2 chrX 110832900 110833516 -55816780 + Lx3C LINE L1 6137 6768 -208 4 1430 357 186 0 0 chrX 110833516 110833586 -55816710 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 1430 795 308 43 11 chrX 110833619 110834059 -55816237 + L1MC2 LINE L1 6033 6486 -33 4 1430 280 290 9 27 chrX 110834142 110834252 -55816044 - Lx9 LINE L1 -176 7468 7361 4 1430 3372 39 0 0 chrX 110835143 110835549 -55814747 - L1Md_T LINE L1 0 6582 6177 4 1430 261 214 86 0 chrX 110836072 110836142 -55814154 - L1MA7 LINE L1 -344 5947 5872 4 1430 249 371 32 3 chrX 110838409 110838550 -55811746 + MIR SINE MIR 34 177 -91 4 1430 320 323 82 20 chrX 110838605 110838740 -55811556 + B4A SINE B4 9 150 -142 4 1430 375 212 12 127 chrX 110838972 110839073 -55811223 + ID_B1 SINE B4 15 146 -78 4 1430 525 96 0 0 chrX 110839073 110839146 -55811150 + B1_Mus1 SINE Alu 6 78 -70 4 1430 375 212 12 127 chrX 110839146 110839163 -55811133 + ID_B1 SINE B4 147 170 -54 4 1430 1169 288 88 22 chrX 110839407 110839861 -55810435 - Lx6 LINE L1 -16 7444 6961 4 1430 324 240 55 16 chrX 110840068 110840195 -55810101 + Lx9 LINE L1 7506 7637 -7 4 1430 3731 72 4 45 chrX 110840260 110840797 -55809499 - L1Md_F2 LINE L1 -2 6580 6066 4 1430 26 0 0 0 chrX 110841206 110841232 -55809064 + AT_rich Low_complexity Low_complexity 1 26 0 4 1430 263 20 37 56 chrX 110841688 110841709 -55808587 + (TTC)n Simple_repeat Simple_repeat 1 19 0 4 1430 1014 157 0 0 chrX 110841709 110841887 -55808409 + CT-rich Low_complexity Low_complexity 2 179 0 4 1430 263 20 37 56 chrX 110841887 110841919 -55808377 + (TTC)n Simple_repeat Simple_repeat 3 36 0 4 1430 2742 169 20 2 chrX 110841928 110842374 -55807922 - Lx4A LINE L1 -37 7021 6568 4 1430 398 303 69 25 chrX 110842439 110842598 -55807698 - MER3 DNA MER1_type -10 199 34 4 1430 8114 49 1 0 chrX 110842598 110843696 -55806600 - L1Md_F2 LINE L1 -2 6580 5482 4 1430 971 104 0 13 chrX 110843700 110843855 -55806441 - L1Md_F2 LINE L1 0 6582 6430 4 1430 324 314 49 21 chrX 110844056 110844199 -55806097 - RMER15 LTR ERVL -18 557 411 4 1430 313 312 54 54 chrX 110844263 110844390 -55805906 - RMER15 LTR ERVL -389 186 60 4 1430 207 0 0 0 chrX 110844390 110844413 -55805883 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1430 313 312 54 54 chrX 110844413 110844471 -55805825 - RMER15 LTR ERVL -516 59 1 4 1430 1150 330 42 56 chrX 110844476 110845067 -55805229 - RMER15-int LTR ERVL -31 4968 4386 4 1430 1490 303 87 26 chrX 110845216 110845880 -55804416 - Lx8 LINE L1 -13 7460 6756 4 1430 1350 349 47 37 chrX 110846106 110846997 -55803299 - RMER15-int LTR ERVL -2799 2200 1301 4 1430 4318 238 38 78 chrX 110847001 110848615 -55801681 - RMER1A Other Other -2 1028 1 4 1430 271 286 11 56 chrX 110848924 110849013 -55801283 - B3A SINE B2 -111 87 3 4 1430 363 44 0 0 chrX 110849134 110849179 -55801117 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1430 474 18 0 0 chrX 110849320 110849375 -55800921 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1430 8572 131 20 6 chrX 110851087 110852539 -55797757 - Lx4A LINE L1 -42 7016 5534 4 1430 198 118 0 0 chrX 110853275 110853309 -55796987 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1430 365 302 90 30 chrX 110853810 110854011 -55796285 + RMER15 LTR ERVL 350 562 -13 4 1430 1415 323 38 22 chrX 110854261 110854840 -55795456 + RMER15-int LTR ERVL 276 863 -4136 4 1430 1329 298 43 34 chrX 110854994 110855802 -55794494 + Lx9 LINE L1 5119 5974 -1670 4 1430 783 303 0 10 chrX 110856504 110856701 -55793595 - B3 SINE B2 0 216 22 4 1430 453 241 163 2 chrX 110857323 110857458 -55792838 - MTD LTR MaLR -269 152 1 4 1430 334 294 12 0 chrX 110857460 110857545 -55792751 - MLT1E2 LTR MaLR -9 618 533 4 1430 8583 35 0 0 chrX 110857792 110859561 -55790735 - L1Md_T LINE L1 0 6582 4897 4 1430 262 255 0 157 chrX 110859561 110859682 -55790614 - MLT1E2 LTR MaLR -399 106 5 4 1430 24 53 0 0 chrX 110859732 110859770 -55790526 + AT_rich Low_complexity Low_complexity 1 38 0 4 1430 1230 199 98 19 chrX 110860113 110860430 -55789866 - Lx4B LINE L1 -760 6298 5957 4 1430 396 59 0 0 chrX 110860640 110860691 -55789605 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1430 23 33 0 0 chrX 110860697 110860727 -55789569 + AT_rich Low_complexity Low_complexity 1 30 0 4 1430 5914 131 22 42 chrX 110860963 110862150 -55788146 - Lx4B LINE L1 -1084 5974 4821 4 1430 2743 205 42 9 chrX 110862148 110862834 -55787462 + Lx4B LINE L1 6275 6982 -18 4 1430 219 133 44 0 chrX 110863299 110863344 -55786952 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 4 1430 609 324 69 69 chrX 110863365 110863627 -55786669 - B4A SINE B4 -23 269 8 4 1430 185 352 102 0 chrX 110864550 110864638 -55785658 + MIRc SINE MIR 95 191 -77 4 1430 244 224 0 0 chrX 110865183 110865232 -55785064 + MER5B DNA MER1_type 1 49 -129 4 1430 23 33 0 0 chrX 110865681 110865711 -55784585 + AT_rich Low_complexity Low_complexity 1 30 0 4 1430 492 18 0 0 chrX 110867148 110867205 -55783091 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1430 917 278 54 7 chrX 110868843 110869140 -55781156 - RLTR40 LTR ERVK -279 538 228 4 1430 27 29 0 0 chrX 110869160 110869194 -55781102 + AT_rich Low_complexity Low_complexity 1 34 0 4 1430 1951 293 46 44 chrX 110869197 110870190 -55780106 - Lx5 LINE L1 -4 7046 6163 4 1430 4218 81 17 14 chrX 110870190 110870735 -55779561 - L1_Mus2 LINE L1 -1 6565 6018 4 1430 3019 32 67 0 chrX 110870735 110871106 -55779190 + MTA_Mm LTR MaLR 1 396 0 4 1430 4218 81 17 14 chrX 110871106 110871151 -55779145 - L1_Mus2 LINE L1 -549 6017 5973 4 1430 5738 216 34 25 chrX 110871151 110872691 -55777605 - Lx5 LINE L1 -888 6162 4618 4 1430 1029 245 73 17 chrX 110872674 110873031 -55777265 - Lx5 LINE L1 -6458 1270 894 4 1430 336 269 130 8 chrX 110873625 110873756 -55776540 - L1MD LINE L1 -1531 4615 4469 4 1430 1388 334 70 28 chrX 110873991 110874822 -55775474 - Lx8 LINE L1 -584 6889 6024 4 1430 651 240 133 25 chrX 110874984 110875276 -55775020 + Lx9 LINE L1 5501 5854 -1842 4 1430 386 211 60 76 chrX 110875549 110875734 -55774562 - Lx9 LINE L1 -20 7624 7443 4 1430 6435 33 8 0 chrX 110875776 110876535 -55773761 - L1Md_T LINE L1 -3 6579 5815 4 1430 284 308 31 0 chrX 110876536 110876666 -55773630 - Lx9 LINE L1 -212 7432 7299 4 1430 342 0 0 0 chrX 110876849 110876887 -55773409 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1430 867 305 87 21 chrX 110876910 110877288 -55773008 + Lx9 LINE L1 6359 6761 -883 4 1430 400 335 106 16 chrX 110877308 110877687 -55772609 - L1M5 LINE L1 -2629 3517 3105 4 1430 292 400 66 5 chrX 110877808 110878004 -55772292 - MTE-int LTR MaLR -326 1254 1047 4 1430 623 352 111 70 chrX 110878029 110878588 -55771708 - MTE-int LTR MaLR -627 953 372 4 1430 463 311 78 29 chrX 110878594 110879048 -55771248 - L1M4 LINE L1 -368 5810 5307 4 1430 1578 289 97 34 chrX 110879286 110880068 -55770228 - L1M4 LINE L1 -1098 5048 4221 4 1430 396 0 0 0 chrX 110880068 110880112 -55770184 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1430 315 0 0 0 chrX 110880112 110880146 -55770150 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1430 1578 289 97 34 chrX 110880146 110880429 -55769867 - L1M4 LINE L1 -1926 4220 3916 4 1430 204 158 0 0 chrX 110880430 110880468 -55769828 + T-rich Low_complexity Low_complexity 1 38 0 5 1430 682 322 77 21 chrX 110880562 110881180 -55769116 - L1MB1 LINE L1 -6 6162 5508 5 1430 483 386 48 34 chrX 110881188 110881542 -55768754 - ORR1E LTR MaLR 0 359 1 5 1430 450 266 85 29 chrX 110881600 110881824 -55768472 - L1MB1 LINE L1 -764 5425 5167 5 1430 4020 122 40 21 chrX 110881824 110882491 -55767805 - Lx3_Mus LINE L1 0 7009 6330 5 1430 450 286 125 37 chrX 110882491 110882537 -55767759 - L1MB1 LINE L1 -974 5166 5125 5 1430 6544 127 27 10 chrX 110882537 110883626 -55766670 - Lx3C LINE L1 -7 6969 5863 5 1430 450 286 125 37 chrX 110883626 110883917 -55766379 - L1MB1 LINE L1 -1016 5124 4807 5 1430 4230 53 35 7 chrX 110883919 110884488 -55765808 - L1Md_F3 LINE L1 -2 6582 5998 5 1430 639 287 144 37 chrX 110884498 110885276 -55765020 - L1M3 LINE L1 -1129 5011 4151 5 1430 610 255 22 7 chrX 110885512 110885650 -55764646 - B3 SINE B2 -76 140 1 5 1430 262 45 45 0 chrX 110885901 110885945 -55764351 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 1430 983 158 57 0 chrX 110886168 110886345 -55763951 - B2_Mm2 SINE B2 -4 191 5 5 178 7446 77 1 3 chrX 110886859 110888132 -55762164 - L1Md_F2 LINE L1 -12 6570 5301 5 1431 12724 131 17 51 chrX 110888137 110891008 -55759288 - L1Md_F2 LINE L1 -2855 3028 217 5 1431 1809 251 124 29 chrX 110891474 110891976 -55758320 + L1_Rod LINE L1 4463 4976 -871 5 1431 306 0 0 0 chrX 110891976 110892010 -55758286 + (TAGA)n Simple_repeat Simple_repeat 1 34 0 5 1431 1809 251 124 29 chrX 110892010 110892291 -55758005 + L1_Rod LINE L1 4977 5320 -527 5 1431 1319 145 0 0 chrX 110892294 110892494 -55757802 + Lx2B LINE L1 6433 6632 -368 5 1431 246 81 0 0 chrX 110892644 110892681 -55757615 + (CCA)n Simple_repeat Simple_repeat 1 37 0 5 1431 356 301 0 0 chrX 110894181 110894264 -55756032 + ID4 SINE ID 1 83 0 5 1431 1045 273 166 12 chrX 110894417 110894754 -55755542 + MTD LTR MaLR 10 398 -21 5 1431 24 0 0 0 chrX 110894806 110894830 -55755466 + AT_rich Low_complexity Low_complexity 1 24 0 5 1431 783 255 23 28 chrX 110895901 110896115 -55754181 + B3 SINE B2 1 213 -3 5 1431 28 48 0 0 chrX 110896115 110896157 -55754139 + AT_rich Low_complexity Low_complexity 1 42 0 5 1431 2330 274 66 55 chrX 110896225 110896736 -55753560 - Lx9 LINE L1 -7 7637 7118 5 1431 369 0 0 0 chrX 110896736 110896777 -55753519 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 5 1431 2330 274 66 55 chrX 110896777 110897253 -55753043 - Lx9 LINE L1 -527 7117 6640 5 1431 261 297 166 20 chrX 110897327 110897478 -55752818 - MIR SINE MIR -88 174 2 5 1431 198 0 0 0 chrX 110897573 110897595 -55752701 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1431 767 333 42 4 chrX 110897772 110898031 -55752265 - Lx9 LINE L1 -1070 6574 6306 5 1431 4130 123 35 22 chrX 110898641 110899357 -55750939 - Lx3A LINE L1 -7 6974 6250 5 1431 2508 121 14 25 chrX 110899357 110899788 -55750508 + Lx3A LINE L1 5842 6267 -714 5 1431 32 43 0 0 chrX 110902770 110902816 -55747480 + AT_rich Low_complexity Low_complexity 1 46 0 5 1431 381 209 32 7 chrX 110902825 110902979 -55747317 + (TA)n Simple_repeat Simple_repeat 1 158 0 5 1431 27 49 0 0 chrX 110903516 110903557 -55746739 + AT_rich Low_complexity Low_complexity 1 41 0 5 1431 180 0 0 0 chrX 110904144 110904164 -55746132 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5 1431 27 29 0 0 chrX 110905350 110905384 -55744912 + AT_rich Low_complexity Low_complexity 1 34 0 5 1431 493 136 211 180 chrX 110906006 110906167 -55744129 + B3 SINE B2 24 191 -25 5 1431 307 314 49 0 chrX 110906307 110906409 -55743887 - MLT1A LTR MaLR -258 116 10 5 1431 348 387 68 10 chrX 110907303 110907687 -55742609 - L2 LINE L2 -976 2443 2038 5 1431 189 107 0 0 chrX 110907739 110907767 -55742529 + (TTG)n Simple_repeat Simple_repeat 2 29 0 5 1431 26 30 0 0 chrX 110909376 110909409 -55740887 + AT_rich Low_complexity Low_complexity 1 33 0 5 1431 576 348 38 5 chrX 110910810 110910995 -55739301 - B4A SINE B4 -100 192 2 5 1431 261 0 0 0 chrX 110912059 110912088 -55738208 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1431 284 200 13 0 chrX 110912132 110912207 -55738089 + GA-rich Low_complexity Low_complexity 4 79 0 5 1431 11929 119 13 20 chrX 110913026 110915479 -55734817 - L1VL4 LINE L1 -813 2746 317 5 1431 1367 87 14 5 chrX 110915710 110915917 -55734379 - L1Md_F2 LINE L1 -2 6580 6372 5 1431 2855 61 0 6 chrX 110915917 110916279 -55734017 + L1Md_F2 LINE L1 6029 6388 -194 5 1431 363 303 45 8 chrX 110916403 110916536 -55733760 + B1F SINE Alu 5 142 -7 5 1431 23 68 0 0 chrX 110916580 110916624 -55733672 + AT_rich Low_complexity Low_complexity 1 44 0 5 1431 216 67 0 0 chrX 110916717 110916747 -55733549 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 5 1431 2445 191 63 14 chrX 110916747 110917229 -55733067 - Lx4A LINE L1 -5 7053 6558 5 1431 4463 139 24 102 chrX 110917229 110918208 -55732088 - RLTR13D6 LTR ERVK 0 902 1 5 1431 1186 315 37 57 chrX 110918208 110918852 -55731444 - Lx4A LINE L1 -360 6698 6072 5 1431 223 342 40 88 chrX 110918881 110919006 -55731290 - PB1D7 SINE Alu -1 119 1 5 1431 24 0 0 0 chrX 110919044 110919068 -55731228 + AT_rich Low_complexity Low_complexity 1 24 0 5 1431 1420 84 11 0 chrX 110919073 110919263 -55731033 + B2_Mm2 SINE B2 1 192 -3 5 1431 181 333 89 49 chrX 110919845 110919968 -55730328 - L3 LINE CR1 -29 4460 4333 5 1431 306 0 0 0 chrX 110920104 110920138 -55730158 + (TAA)n Simple_repeat Simple_repeat 2 35 0 5 1431 550 138 0 18 chrX 110921471 110921582 -55728714 + L1Md_F2 LINE L1 6474 6582 0 5 1431 183 87 20 61 chrX 110921884 110921933 -55728363 + (TAA)n Simple_repeat Simple_repeat 2 48 0 5 1431 331 278 90 71 chrX 110922501 110922656 -55727640 - MER20 DNA MER1_type -61 158 1 5 1431 26 30 0 0 chrX 110923115 110923148 -55727148 + AT_rich Low_complexity Low_complexity 1 33 0 5 1431 218 333 0 0 chrX 110926394 110926463 -55723833 + G-rich Low_complexity Low_complexity 5 73 0 5 1431 242 316 133 95 chrX 110926495 110926600 -55723696 + PB1D10 SINE Alu 2 110 -7 5 1431 1212 87 16 37 chrX 110926696 110926886 -55723410 + B2_Mm2 SINE B2 7 192 -3 5 1431 30 45 0 0 chrX 110927021 110927065 -55723231 + AT_rich Low_complexity Low_complexity 1 44 0 5 1431 502 252 49 8 chrX 110927140 110927297 -55722999 - Lx6 LINE L1 -18 7442 7300 5 1431 1217 35 0 0 chrX 110927301 110927446 -55722850 - B1_Mm SINE Alu -2 145 1 5 1431 342 0 0 0 chrX 110927683 110927721 -55722575 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 1431 1250 61 0 22 chrX 110927944 110928127 -55722169 + L1Md_F2 LINE L1 6401 6579 -3 5 1431 47 19 0 0 chrX 110928137 110928191 -55722105 + AT_rich Low_complexity Low_complexity 1 54 0 5 1431 1801 120 0 14 chrX 110928927 110929207 -55721089 - Lx2 LINE L1 -12 6570 6295 5 1431 1322 225 157 5 chrX 110930017 110930445 -55719851 - Lx9 LINE L1 -3 7641 7149 5 1431 468 0 0 0 chrX 110931433 110931485 -55718811 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1431 863 45 9 0 chrX 110931487 110931599 -55718697 + (GA)n Simple_repeat Simple_repeat 1 113 0 5 1431 26 30 0 0 chrX 110931712 110931745 -55718551 + AT_rich Low_complexity Low_complexity 1 33 0 5 1431 4527 125 6 1 chrX 110931747 110932658 -55717638 - Lx2 LINE L1 -874 6123 5206 5 1431 23 68 0 0 chrX 110933406 110933450 -55716846 + AT_rich Low_complexity Low_complexity 1 44 0 5 1431 24 85 0 0 chrX 110934306 110934365 -55715931 + AT_rich Low_complexity Low_complexity 1 59 0 5 1431 2174 97 28 12 chrX 110934588 110934913 -55715383 + L1Md_F2 LINE L1 6251 6580 -2 5 1431 198 0 0 0 chrX 110935263 110935285 -55715011 + (TA)n Simple_repeat Simple_repeat 2 23 0 5 1431 1716 152 8 54 chrX 110935651 110935875 -55714421 - Lx5 LINE L1 -552 6015 5798 5 1431 360 45 14 43 chrX 110935875 110935944 -55714352 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 5 1431 1124 64 0 0 chrX 110935949 110936089 -55714207 - B1_Mus2 SINE Alu -7 140 1 5 1431 1716 132 7 48 chrX 110936089 110936210 -55714086 - Lx5 LINE L1 -358 5822 5689 5 1431 562 300 7 14 chrX 110936405 110936547 -55713749 + B1_Mur2 SINE Alu 9 149 0 5 1431 549 217 136 179 chrX 110939444 110939752 -55710544 - ORR1B2 LTR MaLR 0 367 73 5 1431 21 36 0 0 chrX 110940439 110940467 -55709829 + AT_rich Low_complexity Low_complexity 1 28 0 5 1431 366 326 72 56 chrX 110940469 110940664 -55709632 - B3A SINE B2 0 198 1 5 1431 43 47 0 0 chrX 110942192 110942256 -55708040 + AT_rich Low_complexity Low_complexity 1 64 0 5 1431 914 148 46 14 chrX 110943005 110943224 -55707072 + Lx9 LINE L1 7417 7642 -2 5 1431 219 167 0 0 chrX 110943280 110943322 -55706974 + A-rich Low_complexity Low_complexity 1 42 0 5 1431 27 0 0 0 chrX 110943408 110943435 -55706861 + AT_rich Low_complexity Low_complexity 1 27 0 5 1431 211 273 125 0 chrX 110944975 110945063 -55705233 - MIRc SINE MIR -46 222 124 5 1431 23 33 0 0 chrX 110945957 110945987 -55704309 + AT_rich Low_complexity Low_complexity 1 30 0 5 1431 967 382 91 52 chrX 110950049 110950952 -55699344 - MTE-int LTR MaLR -468 1112 175 5 1431 4101 136 9 3 chrX 110953743 110954392 -55695904 - Lx2 LINE L1 -1 6996 6344 5 1431 207 69 0 0 chrX 110954398 110954427 -55695869 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 5 1431 6851 131 15 20 chrX 110954429 110955547 -55694749 - Lx3A LINE L1 -17 6964 5852 5 1431 6048 99 26 39 chrX 110955547 110956567 -55693729 - L1_Mur1 LINE L1 -300 5586 4580 5 1431 1517 159 39 89 chrX 110956555 110956893 -55693403 - Lx2 LINE L1 -658 6339 6019 5 1431 342 341 45 0 chrX 110958048 110958180 -55692116 + B1F2 SINE Alu 1 138 -11 5 1431 552 246 82 0 chrX 110959018 110959152 -55691144 - Lx5 LINE L1 -121 6929 6785 5 1431 21 0 0 0 chrX 110960022 110960043 -55690253 + AT_rich Low_complexity Low_complexity 1 21 0 5 1431 180 0 0 0 chrX 110960210 110960230 -55690066 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 5 1431 2755 55 0 0 chrX 110960233 110960577 -55689719 - L1Md_F2 LINE L1 -19 6563 6220 5 1431 5171 45 4 0 chrX 110960578 110961376 -55688920 + L1Md_F2 LINE L1 5410 6210 -372 5 1431 287 195 22 89 chrX 110961482 110961572 -55688724 + Lx9 LINE L1 7350 7433 -211 5 1431 1476 239 33 0 chrX 110961636 110961966 -55688330 - Lx6 LINE L1 -572 6888 6548 5 1431 440 317 29 29 chrX 110961967 110962139 -55688157 + ERVL-int LTR ERVL 3328 3499 -2258 5 1431 366 91 0 0 chrX 110962143 110962198 -55688098 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1431 1051 251 53 94 chrX 110962294 110962689 -55687607 + MTE2a LTR MaLR 1 379 0 5 1431 558 329 90 27 chrX 110962776 110962997 -55687299 - B4 SINE B4 -15 277 43 6 1431 535 351 21 16 chrX 110962997 110963191 -55687105 + B3A SINE B2 2 196 -2 6 1431 1825 179 30 12 chrX 110963222 110963561 -55686735 + ORR1B1 LTR MaLR 43 387 -7 6 1431 3353 189 60 48 chrX 110963564 110964291 -55686005 + ORR1B1-int LTR MaLR 1 737 -1226 6 1431 465 206 98 0 chrX 110964291 110964383 -55685913 + B1_Mus2 SINE Alu 3 103 -44 6 1431 3680 160 46 25 chrX 110964387 110965106 -55685190 + ORR1B1-int LTR MaLR 718 1452 -511 6 1431 1008 150 63 68 chrX 110965106 110965520 -55684776 - ORR1B1-int LTR MaLR 0 1963 1752 6 1431 307 30 88 15 chrX 110965922 110965990 -55684306 + (TTTG)n Simple_repeat Simple_repeat 1 73 0 6 1431 1177 41 14 0 chrX 110965990 110966135 -55684161 - B1_Mm SINE Alu 0 147 1 6 1431 948 160 0 6 chrX 110966136 110966312 -55683984 + Lx LINE L1 6478 6652 -2 6 1431 5631 196 68 14 chrX 110966474 110967872 -55682424 - Lx2B LINE L1 -2 6998 5493 6 1431 5451 155 9 50 chrX 110967868 110968592 -55681704 + L1_Mur2 LINE L1 4499 5220 -657 6 1431 2731 57 6 3 chrX 110968592 110968946 -55681350 + L1_Mus2 LINE L1 6212 6566 0 6 1431 5451 155 9 50 chrX 110968946 110968989 -55681307 + L1_Mur2 LINE L1 5221 5225 -652 6 1431 303 28 0 0 chrX 110968989 110969025 -55681271 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1431 5451 155 9 50 chrX 110969025 110969244 -55681052 + L1_Mur2 LINE L1 5226 5438 -439 6 1431 198 0 0 0 chrX 110969244 110969266 -55681030 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 6 1431 5451 155 9 50 chrX 110969266 110969336 -55680960 + L1_Mur2 LINE L1 5439 5513 -364 6 1431 2577 47 0 0 chrX 110969692 110970011 -55680285 - L1Md_T LINE L1 -494 6088 5770 6 1431 4133 41 0 0 chrX 110970011 110970503 -55679793 + L1Md_T LINE L1 6091 6582 0 6 1431 2333 325 95 62 chrX 110970753 110972292 -55678004 + RMER15-int LTR ERVL 26 1615 -3384 6 1431 750 102 24 0 chrX 110972601 110972728 -55677568 + (GA)n Simple_repeat Simple_repeat 2 131 0 6 1431 2289 351 54 64 chrX 110973039 110974830 -55675466 + RMER15-int LTR ERVL 1994 3767 -1232 6 1431 630 225 8 8 chrX 110974846 110974976 -55675320 + ORR1B2 LTR MaLR 1 130 -237 6 1431 295 294 12 0 chrX 110974979 110975064 -55675232 + RMER15-int LTR ERVL 3951 4036 -963 6 1431 2286 65 0 10 chrX 110975069 110975366 -55674930 - L1Md_F2 LINE L1 -202 6380 6087 6 1431 1148 114 51 32 chrX 110975366 110975583 -55674713 + L1Md_F2 LINE L1 6361 6581 -1 6 1431 270 308 83 83 chrX 110975685 110975830 -55674466 + RMER15-int LTR ERVL 4162 4306 -693 6 1431 766 358 20 9 chrX 110975883 110976230 -55674066 + RMER15-int LTR ERVL 4390 4740 -259 6 1431 331 257 92 50 chrX 110976414 110976533 -55673763 + Lx8 LINE L1 6946 7069 -404 6 1431 337 356 43 28 chrX 110976668 110976879 -55673417 + RMER15 LTR ERVL 352 565 -10 6 1431 2645 87 0 3 chrX 110977105 110977462 -55672834 + Lx3_Mus LINE L1 6379 6734 -275 6 1431 3240 172 45 53 chrX 110977462 110978106 -55672190 - RLTR26 LTR ERVK 0 642 4 6 1431 1834 94 11 35 chrX 110978106 110978392 -55671904 + Lx3_Mus LINE L1 6726 7004 -5 6 1431 26 30 0 0 chrX 110978694 110978727 -55671569 + AT_rich Low_complexity Low_complexity 1 33 0 6 1431 40 0 0 0 chrX 110979687 110979727 -55670569 + AT_rich Low_complexity Low_complexity 1 40 0 6 1431 1562 39 69 0 chrX 110979732 110979936 -55670360 - L1Md_A LINE L1 -2 6580 6363 6 1431 547 344 39 13 chrX 110980070 110980300 -55669996 + RMER15 LTR ERVL 340 575 0 6 1431 434 286 48 78 chrX 110980484 110980641 -55669655 + B4A SINE B4 115 269 -23 6 1431 330 26 0 0 chrX 110980641 110980680 -55669616 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1431 511 303 142 55 chrX 110981203 110981584 -55668712 + MLT2D LTR ERVL 1 414 0 6 1431 668 371 71 16 chrX 110981887 110982466 -55667830 + ERVL-E-int LTR ERVL 1528 2082 -3585 6 1431 3685 267 80 10 chrX 110982647 110983666 -55666630 - Lx6 LINE L1 0 7460 6371 6 1431 2082 142 19 0 chrX 110983748 110984071 -55666225 + Lx3A LINE L1 6637 6965 -16 6 1431 378 0 0 0 chrX 110984072 110984114 -55666182 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 6 1431 4910 155 11 96 chrX 110984168 110984656 -55665640 + L1_Mus4 LINE L1 4919 5397 -486 6 1431 2469 50 3 48 chrX 110984656 110984993 -55665303 - RLTRETN_Mm LTR ERVK 0 322 1 6 1431 4910 155 11 96 chrX 110984993 110985004 -55665292 + L1_Mus4 LINE L1 5398 5398 -485 6 1431 4254 82 0 3 chrX 110985004 110985569 -55664727 + L1_Mus2 LINE L1 6003 6565 -1 6 1431 1248 111 5 10 chrX 110985576 110985776 -55664520 + L1Md_F2 LINE L1 6384 6582 0 6 1431 4910 155 11 96 chrX 110985776 110985843 -55664453 + L1_Mus4 LINE L1 5398 5404 -479 6 1431 258 32 0 0 chrX 110985843 110985874 -55664422 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1431 7094 113 17 17 chrX 110985874 110987085 -55663211 + L1_Mus4 LINE L1 5405 6636 0 6 1431 379 311 94 67 chrX 110987117 110987341 -55662955 + MLT2B4 LTR ERVL 291 520 -36 6 1431 1835 74 4 0 chrX 110987356 110987598 -55662698 - L1_Mus2 LINE L1 -1 6565 6323 6 1431 4450 197 58 12 chrX 110987678 110988439 -55661857 - Lx4B LINE L1 -117 6883 6024 6 1431 468 48 0 0 chrX 110988439 110988502 -55661794 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 1431 4450 175 55 7 chrX 110988502 110988801 -55661495 - Lx4B LINE L1 -887 6171 5853 6 1431 389 372 15 8 chrX 110988997 110989127 -55661169 - RSINE1 SINE B4 -15 150 20 6 1431 787 277 90 10 chrX 110989204 110989514 -55660782 - Lx9 LINE L1 -43 7601 7267 6 1431 1402 237 69 11 chrX 110989560 110989910 -55660386 - ORR1D1 LTR MaLR -2 372 3 6 1431 2612 287 137 22 chrX 110989966 110991323 -55658973 - RMER1A Other Other 0 1030 1 6 1431 1036 235 106 15 chrX 110991309 110991573 -55658723 - RMER1B Other Other -651 415 128 6 1431 330 26 0 0 chrX 110991892 110991931 -55658365 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 1431 486 321 67 59 chrX 110992420 110992761 -55657535 + L1MC1 LINE L1 5777 6120 -213 6 1431 252 314 58 0 chrX 110992758 110992844 -55657452 + L1MC1 LINE L1 6226 6316 -17 6 1431 1013 137 0 0 chrX 110992953 110993106 -55657190 + B2_Mm2 SINE B2 2 154 -41 6 1431 801 138 39 0 chrX 110993109 110993239 -55657057 + Lx4A LINE L1 6596 6730 -328 6 1431 585 45 80 0 chrX 110993241 110993329 -55656967 + L1_Mus2 LINE L1 6472 6566 0 6 1431 1591 200 59 22 chrX 110993348 110993670 -55656626 + Lx4A LINE L1 6725 7058 0 6 1431 513 316 105 0 chrX 110993915 110994105 -55656191 - B3 SINE B2 -6 210 1 6 1431 311 312 31 0 chrX 110994607 110994703 -55655593 + B1F2 SINE Alu 3 101 -48 6 1431 8347 38 2 0 chrX 110994840 110995887 -55654409 - L1Md_F2 LINE L1 0 6582 5534 6 1431 3430 239 78 16 chrX 110996386 110997272 -55653024 + Lx6 LINE L1 5789 6723 -737 6 1431 2049 116 0 21 chrX 110997269 110997595 -55652701 + Lx3B LINE L1 5040 5358 -528 6 1431 7892 134 25 17 chrX 110997585 110998919 -55651377 + Lx3B LINE L1 5626 6969 -4 6 1431 2197 241 96 16 chrX 110998917 110999491 -55650805 + Lx6 LINE L1 6706 7325 -135 6 1431 306 0 0 0 chrX 110999491 110999525 -55650771 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1431 350 284 83 13 chrX 111000277 111000434 -55649862 - Lx9 LINE L1 -280 7364 7197 1 1431 408 256 12 0 chrX 111000439 111000525 -55649771 + ORR1D1 LTR MaLR 1 87 -287 2 1431 968 235 41 14 chrX 111000664 111000957 -55649339 - L1_Rod LINE L1 -430 5417 5117 3 1431 3807 157 152 29 chrX 111000984 111001771 -55648525 + L1VL1 LINE L1 2 885 -5537 4 1431 6217 123 24 61 chrX 111001771 111002843 -55647453 + RLTR13D4 LTR ERVK 1 1033 0 5 1431 14190 98 9 15 chrX 111002844 111003299 -55646997 + MusHAL1 LINE L1 1077 1530 -2384 6 1431 4946 117 77 16 chrX 111003299 111003785 -55646511 - RMER17D LTR ERVK -2 887 361 7 1431 716 59 8 33 chrX 111003785 111003907 -55646389 + (GGAGA)n Simple_repeat Simple_repeat 2 120 0 8 1431 4946 117 77 16 chrX 111003907 111004256 -55646040 - RMER17D LTR ERVK -529 360 2 7 1431 14190 121 10 36 chrX 111004256 111005917 -55644379 + MusHAL1 LINE L1 1531 3172 -742 6 1431 360 0 0 0 chrX 111005917 111005957 -55644339 + (TTTTC)n Simple_repeat Simple_repeat 1 40 0 9 1431 1151 90 11 0 chrX 111005957 111006135 -55644161 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 1 1431 14190 121 10 36 chrX 111006135 111006186 -55644110 + MusHAL1 LINE L1 3173 3179 -735 6 1431 1101 72 0 48 chrX 111006186 111006375 -55643921 + (TTTTC)n Simple_repeat Simple_repeat 1 180 0 1 1431 261 0 0 0 chrX 111006375 111006403 -55643893 + (CCTTG)n Simple_repeat Simple_repeat 1 29 0 1 1431 937 126 6 11 chrX 111006403 111006579 -55643717 + (TTTCC)n Simple_repeat Simple_repeat 3 177 0 1 1431 14190 148 10 34 chrX 111006579 111007377 -55642919 + MusHAL1 LINE L1 3180 3982 -1904 6 1431 1498 334 59 25 chrX 111007381 111008112 -55642184 + Lx8 LINE L1 6517 7272 -201 1 1431 17240 104 3 1 chrX 111008203 111011412 -55638884 + L1_Mus2 LINE L1 3350 6565 -1 1 1431 582 157 0 0 chrX 111011493 111011595 -55638701 + (TA)n Simple_repeat Simple_repeat 2 103 0 1 1431 320 316 93 4 chrX 111011635 111011883 -55638413 - L1M2 LINE L1 -1227 4916 4647 1 1431 374 281 181 19 chrX 111012282 111012326 -55637970 - L1M2 LINE L1 -1530 4613 4570 1 1431 935 101 6 0 chrX 111012326 111012494 -55637802 + (TAGA)n Simple_repeat Simple_repeat 4 172 0 1 1431 374 281 181 19 chrX 111012494 111012714 -55637582 - L1M2 LINE L1 -1574 4569 4307 1 1431 235 238 125 48 chrX 111012785 111012946 -55637350 - L1M2 LINE L1 -2007 4136 3962 1 1431 3090 109 98 8 chrX 111012946 111013438 -55636858 + Lx3B LINE L1 6437 6972 -1 1 1431 2649 194 201 8 chrX 111013464 111014114 -55636182 - Lx4B LINE L1 -2 7056 6281 2 1431 342 0 0 0 chrX 111016546 111016584 -55633712 + (A)n Simple_repeat Simple_repeat 1 38 0 2 1431 356 320 122 51 chrX 111017248 111017544 -55632752 - L1M4 LINE L1 -2135 4011 3695 2 1431 358 200 86 0 chrX 111017562 111017702 -55632594 - Lx9 LINE L1 -5 7639 7488 2 178 2376 294 46 49 chrX 111017780 111018702 -55631594 - Lx9 LINE L1 -132 7512 6594 2 1432 1695 262 58 24 chrX 111018719 111018939 -55631357 - L1_Rod LINE L1 -2947 2900 2681 2 1432 612 40 0 0 chrX 111018939 111019014 -55631282 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 1432 1695 262 58 24 chrX 111019014 111019426 -55630870 - L1_Rod LINE L1 -3167 2680 2247 2 1432 874 239 10 24 chrX 111019428 111019634 -55630662 - ORR1D1 LTR MaLR 0 374 172 2 1432 704 182 9 194 chrX 111019865 111019945 -55630351 - ORR1D1 LTR MaLR -166 208 156 2 1432 4520 96 12 13 chrX 111019945 111020620 -55629676 - Lx3_Mus LINE L1 -8 7001 6328 2 1432 704 182 9 194 chrX 111020620 111020771 -55629525 - ORR1D1 LTR MaLR -219 155 20 2 1432 22 35 0 0 chrX 111021136 111021165 -55629131 + AT_rich Low_complexity Low_complexity 1 29 0 2 1432 558 0 0 0 chrX 111021372 111021434 -55628862 + (TTTC)n Simple_repeat Simple_repeat 3 64 0 2 1432 654 162 18 9 chrX 111021436 111021548 -55628748 - PB1D9 SINE Alu -6 114 2 3 1432 901 70 0 0 chrX 111021548 111021661 -55628635 + B1_Mus1 SINE Alu 24 136 -12 3 1432 462 18 0 0 chrX 111021662 111021717 -55628579 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 3 1432 1910 165 66 31 chrX 111023132 111023513 -55626783 - ORR1B1 LTR MaLR 0 394 1 3 1432 24 32 0 0 chrX 111023595 111023626 -55626670 + AT_rich Low_complexity Low_complexity 1 31 0 3 1432 2764 34 45 6 chrX 111023999 111024352 -55625944 + IAPLTR1_Mm LTR ERVK 1 367 0 3 1432 7017 86 118 45 chrX 111024352 111025569 -55624727 + IAPEz-int LTR ERVK 8 1313 -5168 3 1432 28874 20 1 1 chrX 111025568 111028839 -55621457 + IAPEz-int LTR ERVK 3210 6481 0 3 1432 2764 34 45 6 chrX 111028839 111029192 -55621104 + IAPLTR1_Mm LTR ERVK 1 367 0 3 1432 220 0 56 28 chrX 111029380 111029416 -55620880 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 3 1432 1846 122 32 0 chrX 111029705 111029984 -55620312 - ORR1A2 LTR MaLR -39 288 1 3 1432 1326 256 35 6 chrX 111030000 111030342 -55619954 - Lx9 LINE L1 -594 7050 6699 3 1432 8765 222 49 57 chrX 111030416 111033655 -55616641 - Lx5 LINE L1 -41 7009 3795 3 1432 1248 181 238 6 chrX 111033651 111033995 -55616301 - Lx5 LINE L1 -3393 2484 2061 3 1432 246 238 16 0 chrX 111034025 111034102 -55616194 + GA-rich Low_complexity Low_complexity 1 78 0 4 1432 875 333 82 94 chrX 111034105 111034639 -55615657 - Lx9 LINE L1 -322 7322 6826 4 1432 1162 143 21 0 chrX 111034639 111034828 -55615468 + B2_Mm2 SINE B2 2 194 -1 4 1432 875 333 82 94 chrX 111034828 111035314 -55614982 - Lx9 LINE L1 -819 6825 6314 4 1432 5014 176 10 4 chrX 111035542 111036446 -55613850 + RMER6-int LTR ERVK 112 1020 -2157 4 1432 1519 158 95 17 chrX 111036449 111036745 -55613551 - ORR1A4 LTR MaLR -9 320 2 4 1432 8225 173 47 89 chrX 111036746 111038401 -55611895 - ORR1A4-int LTR MaLR 0 1792 446 4 1432 1772 175 189 23 chrX 111038401 111038649 -55611647 + RLTR19 LTR ERVK 1 315 -184 4 1432 192 40 0 0 chrX 111038649 111038674 -55611622 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1432 1772 175 189 23 chrX 111038674 111038853 -55611443 + RLTR19 LTR ERVK 316 498 -1 4 1432 8225 169 48 88 chrX 111038853 111039183 -55611113 - ORR1A4-int LTR MaLR -1518 445 123 4 1432 1752 146 10 19 chrX 111039183 111039497 -55610799 + Lx3A LINE L1 6664 6974 -7 4 1432 8225 169 48 88 chrX 111039497 111039654 -55610642 - ORR1A4-int LTR MaLR -1841 122 1 4 1432 1840 135 33 69 chrX 111039677 111040011 -55610285 - ORR1A4 LTR MaLR -7 322 1 4 1432 276 53 0 0 chrX 111040032 111040070 -55610226 + (TTG)n Simple_repeat Simple_repeat 2 39 0 4 1432 3344 164 90 0 chrX 111040078 111040916 -55609380 + RMER6-int LTR ERVK 1034 1946 -1231 4 1432 515 151 0 0 chrX 111040907 111040993 -55609303 + RMER6-int LTR ERVK 2354 2439 -738 4 1432 2314 201 126 82 chrX 111040997 111041794 -55608502 + RLTR13D6 LTR ERVK 71 902 0 4 1432 5181 114 18 5 chrX 111041794 111042863 -55607433 - L1_Mus3 LINE L1 -542 6096 5012 5 1432 1744 103 0 0 chrX 111042845 111043097 -55607199 + MusHAL1 LINE L1 1311 1562 -1150 5 1432 1360 127 0 0 chrX 111043095 111043315 -55606981 - MusHAL1 LINE L1 -1398 1314 1095 5 1432 5747 23 11 24 chrX 111043315 111044024 -55606272 + L1Md_F3 LINE L1 5885 6584 0 5 1432 4433 176 51 55 chrX 111044031 111044127 -55606169 - RLTR25A LTR ERVK -134 969 892 5 1432 252 100 0 0 chrX 111044127 111044167 -55606129 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1432 4433 176 51 55 chrX 111044167 111044372 -55605924 - RLTR25A LTR ERVK -212 891 695 5 1432 432 0 0 0 chrX 111044372 111044420 -55605876 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1432 4433 176 51 55 chrX 111044420 111044794 -55605502 - RLTR25A LTR ERVK -409 694 320 5 1432 598 133 26 71 chrX 111044794 111044948 -55605348 - L1Md_T LINE L1 0 6582 6436 5 1432 4433 176 51 55 chrX 111044948 111045243 -55605053 - RLTR25A LTR ERVK -784 319 4 5 1432 1784 148 21 21 chrX 111045262 111045593 -55604703 - RLTR25A LTR ERVK -189 914 584 5 1432 304 221 0 188 chrX 111045609 111045726 -55604570 - RLTR25A LTR ERVK -904 199 105 5 1432 2011 70 8 103 chrX 111045726 111046077 -55604219 + RLTR10 LTR ERVK 1 318 -72 5 1432 231 56 0 0 chrX 111046181 111046217 -55604079 + RLTR10 LTR ERVK 259 294 -96 6 1432 971 54 0 0 chrX 111046217 111046346 -55603950 + RLTR10 LTR ERVK 260 388 -2 6 1432 16111 28 42 5 chrX 111046346 111048283 -55602013 + RLTR10-int LTR ERVK 6 1984 -3 6 1432 2011 70 8 103 chrX 111048285 111048636 -55601660 + RLTR10 LTR ERVK 1 318 -72 6 1432 231 56 0 0 chrX 111048740 111048776 -55601520 + RLTR10 LTR ERVK 259 294 -96 6 1432 970 54 0 0 chrX 111048776 111048905 -55601391 + RLTR10 LTR ERVK 260 388 -2 6 1432 519 206 28 0 chrX 111048907 111049014 -55601282 - RLTR25A LTR ERVK -993 110 1 5 1432 396 339 7 5 chrX 111049015 111049174 -55601122 - L1M2 LINE L1 -2307 3836 3685 6 1432 938 41 8 0 chrX 111049199 111049322 -55600974 + (TTCC)n Simple_repeat Simple_repeat 3 126 0 6 1432 3882 73 12 2 chrX 111049366 111049873 -55600423 - RLTR1B LTR ERV1 0 512 1 6 1432 317 316 95 87 chrX 111050018 111050271 -55600025 + RMER2 LTR ERV1 308 562 -5 6 1432 1577 157 17 37 chrX 111050361 111050659 -55599637 + Lx4B LINE L1 6762 7053 -5 6 1432 369 0 0 0 chrX 111050772 111050813 -55599483 + (CAAAC)n Simple_repeat Simple_repeat 2 42 0 6 1432 270 0 0 0 chrX 111050813 111050843 -55599453 + (CCA)n Simple_repeat Simple_repeat 1 30 0 6 1432 354 266 14 35 chrX 111051035 111051179 -55599117 + L1_Rod LINE L1 3274 3414 -2433 6 1432 601 264 99 0 chrX 111052260 111052442 -55597854 + B3 SINE B2 1 200 -16 7 1432 450 366 105 0 chrX 111053163 111053420 -55596876 + RMER15 LTR ERVL 276 559 -16 7 1432 1546 188 120 6 chrX 111053483 111053799 -55596497 + RLTR11A2 LTR ERVK 1 352 -175 7 1432 30 0 0 0 chrX 111054003 111054033 -55596263 + AT_rich Low_complexity Low_complexity 1 30 0 7 1432 1313 173 114 84 chrX 111054184 111054551 -55595745 + ORR1C1 LTR MaLR 1 378 0 7 1432 5540 153 42 6 chrX 111054664 111056018 -55594278 + L1VL4 LINE L1 1 1224 -2335 7 1432 423 0 0 0 chrX 111056018 111056065 -55594231 + (GA)n Simple_repeat Simple_repeat 2 48 0 7 1432 3041 94 34 4 chrX 111056065 111056190 -55594106 + L1VL4 LINE L1 1225 1360 -2199 7 1432 522 239 0 0 chrX 111056193 111056310 -55593986 + L1Md_F LINE L1 211 327 -6192 7 1432 33882 71 2 30 chrX 111056310 111061753 -55588543 + L1Md_F LINE L1 301 5586 -297 7 1432 8331 57 2 14 chrX 111061753 111062761 -55587535 + L1Md_F2 LINE L1 5587 6582 0 7 1432 3961 118 28 14 chrX 111062944 111063598 -55586698 + MusHAL1 LINE L1 502 1164 -1548 8 1432 26380 109 6 15 chrX 111064196 111064732 -55585564 - L1_Mus3 LINE L1 -262 6376 5849 8 1432 3117 63 45 5 chrX 111064732 111065113 -55585183 - MTA_Mm LTR MaLR 0 396 1 8 1432 26380 132 13 12 chrX 111065113 111068865 -55581431 - L1_Mus3 LINE L1 -35 5848 2072 8 1432 180 0 0 0 chrX 111068865 111068885 -55581411 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8 1432 26380 132 13 12 chrX 111068885 111069418 -55580878 - L1_Mus3 LINE L1 -3812 2071 1553 8 1432 3002 309 64 41 chrX 111069418 111071009 -55579287 + ETnERV2-int LTR ERVK 1536 3163 -3004 8 1432 2539 106 109 49 chrX 111071009 111071457 -55578839 + IAPLTR2_Mm LTR ERVK 1 475 0 8 1432 1164 103 10 80 chrX 111071458 111071659 -55578637 + IAPEz-int LTR ERVK 9 195 -6286 8 1432 242 302 0 0 chrX 111071659 111071712 -55578584 + RLTR27 LTR ERVK 223 275 -34 8 1432 426 115 0 16 chrX 111071712 111071774 -55578522 + IAPEz-int LTR ERVK 145 205 -7376 8 1432 1454 112 86 12 chrX 111071790 111072033 -55578263 - IAPLTR2b LTR ERVK -66 261 1 8 1432 6229 40 4 15 chrX 111072033 111072787 -55577509 - IAPEz-int LTR ERVK 0 6481 5736 8 1432 2268 61 0 0 chrX 111072786 111073064 -55577232 - IAPEz-int LTR ERVK -4845 1636 1359 8 1432 3480 67 11 19 chrX 111073064 111073538 -55576758 - IAPEz-int LTR ERVK -5819 662 211 8 1432 17537 93 8 24 chrX 111073611 111075997 -55574299 + ETnERV2-int LTR ERVK 4083 6429 -977 8 1432 389 126 0 49 chrX 111076093 111076174 -55574122 + RLTR45-int LTR ERVK 6009 6072 -1172 8 1432 1352 149 60 4 chrX 111076174 111076243 -55574053 + ETnERV3-int LTR ERVK 5529 5609 -199 8 1432 254 26 53 0 chrX 111076243 111076281 -55574015 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 9 1432 1352 149 60 4 chrX 111076281 111076446 -55573850 + ETnERV3-int LTR ERVK 5610 5775 -33 8 1432 1873 153 227 7 chrX 111076466 111076907 -55573389 + RLTR13D6 LTR ERVK 2 539 -363 8 1432 552 66 0 38 chrX 111076907 111076986 -55573310 + ETnERV2-int LTR ERVK 7331 7406 0 9 1432 2736 111 30 10 chrX 111076986 111077387 -55572909 + RLTR9E LTR ERVK 1 409 0 9 1432 5501 113 28 6 chrX 111077387 111078204 -55572092 + RMER16-int LTR ERVK 283 1117 -4289 9 1432 1787 227 56 139 chrX 111078220 111078824 -55571472 + RLTR1D LTR ERV1 52 605 0 9 1432 26298 239 27 21 chrX 111078825 111086387 -55563909 + MMERGLN-int LTR ERV1 1 7778 0 9 1432 1771 227 56 139 chrX 111086403 111087007 -55563289 + RLTR1D LTR ERV1 52 605 0 9 1432 2583 134 16 21 chrX 111087007 111087407 -55562889 + RMER16-int LTR ERVK 1114 1512 -3894 9 1432 1784 202 117 77 chrX 111087407 111087673 -55562623 + RLTR41 LTR ERV1 1 280 -166 9 1432 246 32 0 0 chrX 111087673 111087704 -55562592 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 9 1432 1784 202 117 77 chrX 111087704 111087866 -55562430 + RLTR41 LTR ERV1 281 445 -1 9 1432 2583 134 16 21 chrX 111087866 111087891 -55562405 + RMER16-int LTR ERVK 1513 1537 -3869 9 1432 1411 241 82 95 chrX 111088046 111088729 -55561567 + ETnERV3-int LTR ERVK 2176 2862 -2946 9 1432 3615 111 48 7 chrX 111088730 111089277 -55561019 + RMER16-int LTR ERVK 2104 2672 -2734 9 1432 1514 246 116 37 chrX 111089280 111089710 -55560586 - RMER16 LTR ERVK 0 533 70 9 1432 10330 127 31 20 chrX 111089737 111091546 -55558750 + RMER16-int LTR ERVK 2670 4550 -856 9 1432 5213 101 0 3 chrX 111092317 111093040 -55557256 - L1_Mm LINE L1 -862 5021 4301 1 1432 4334 83 4 2 chrX 111093040 111093584 -55556712 + L1_Mus2 LINE L1 6022 6566 0 1 1432 9110 174 30 98 chrX 111093592 111094004 -55556292 + Lx2 LINE L1 2449 2860 -3017 1 1432 501 17 0 0 chrX 111094004 111094062 -55556234 + (GAAA)n Simple_repeat Simple_repeat 3 60 0 1 1432 9110 174 30 98 chrX 111094062 111094388 -55555908 + Lx2 LINE L1 2861 3167 -2710 1 1432 1136 79 36 0 chrX 111094388 111094528 -55555768 + B1_Mus1 SINE Alu 3 147 -1 1 1432 9110 174 30 98 chrX 111094528 111095018 -55555278 + Lx2 LINE L1 3168 3560 -2317 1 1432 351 0 0 0 chrX 111095018 111095057 -55555239 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1432 9110 174 30 98 chrX 111095057 111095380 -55554916 + Lx2 LINE L1 3561 3850 -2027 1 1432 206 32 32 0 chrX 111095380 111095411 -55554885 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 1432 9110 174 30 98 chrX 111095411 111096086 -55554210 + Lx2 LINE L1 3851 4526 -1351 1 1432 2132 165 13 24 chrX 111096087 111096465 -55553831 - RMER17B LTR ERVK 0 958 585 1 1432 2601 121 26 29 chrX 111096460 111096878 -55553418 - RMER17B LTR ERVK -541 417 1 1 1432 5814 175 18 1 chrX 111096881 111098475 -55551821 + Lx2 LINE L1 4526 6182 -815 1 1432 463 257 28 21 chrX 111098475 111098624 -55551672 - RMER17B LTR ERVK -1 957 751 1 1432 1078 90 0 55 chrX 111098626 111098646 -55551650 - L1_Mur2 LINE L1 -1277 4600 4582 1 1432 607 111 10 0 chrX 111098646 111098745 -55551551 + Lx2 LINE L1 6896 6995 -2 1 1432 1078 90 0 55 chrX 111098745 111098889 -55551407 - L1_Mur2 LINE L1 -1296 4581 4445 1 1432 429 297 50 21 chrX 111099443 111099584 -55550712 + Lx8 LINE L1 7049 7193 -280 1 1432 903 233 35 4 chrX 111099618 111099872 -55550424 + Lx6 LINE L1 5112 5373 -507 1 1432 3521 164 0 2 chrX 111099865 111100459 -55549837 - L1_Mm LINE L1 -552 5331 4739 1 1432 689 116 47 55 chrX 111100459 111100587 -55549709 + IAPLTR2_Mm LTR ERVK 349 475 0 1 1432 6869 132 23 2 chrX 111100587 111101758 -55548538 + Lx LINE L1 5460 6654 0 1 1432 21 0 0 0 chrX 111101758 111101779 -55548517 + AT_rich Low_complexity Low_complexity 1 21 0 1 1432 354 227 0 0 chrX 111101822 111101897 -55548399 + L1M4 LINE L1 5739 5813 -371 1 1432 2299 222 81 14 chrX 111101913 111102767 -55547529 + Lx6 LINE L1 5343 6239 -1221 1 1432 4441 78 11 12 chrX 111102772 111103343 -55546953 - L1_Mus3 LINE L1 0 6638 6069 1 1432 2710 113 3 0 chrX 111103345 111103733 -55546563 + L1_Mm LINE L1 5049 5437 -446 1 1432 3702 262 76 14 chrX 111103731 111104224 -55546072 + Lx6 LINE L1 6228 6736 -724 1 1432 339 25 0 0 chrX 111104224 111104264 -55546032 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 1 1432 3702 262 76 14 chrX 111104264 111104762 -55545534 + Lx6 LINE L1 6737 7280 -180 1 1432 908 169 0 11 chrX 111104784 111104963 -55545333 + CT-rich Low_complexity Low_complexity 2 178 0 1 1432 2623 62 0 12 chrX 111104977 111105304 -55544992 - L1Md_F2 LINE L1 0 6582 6260 1 1432 257 342 39 19 chrX 111105332 111105487 -55544809 - Lx8 LINE L1 -68 7405 7248 1 1432 2959 113 8 2 chrX 111105608 111106006 -55544290 + MTB LTR MaLR 1 400 0 1 1432 748 258 123 34 chrX 111106857 111107150 -55543146 + RMER20B LTR ERVK 95 413 -214 1 1432 1654 60 0 0 chrX 111107214 111107413 -55542883 + L1Md_T LINE L1 6384 6582 0 1 1432 27 62 0 0 chrX 111107553 111107601 -55542695 + AT_rich Low_complexity Low_complexity 1 48 0 1 1432 2764 46 12 6 chrX 111107700 111108027 -55542269 - L1_Mus1 LINE L1 0 6567 6239 1 1432 27 29 0 0 chrX 111108044 111108078 -55542218 + AT_rich Low_complexity Low_complexity 1 34 0 1 1432 686 61 20 0 chrX 111108224 111108323 -55541973 + (TAGA)n Simple_repeat Simple_repeat 4 104 0 1 1432 6574 192 47 31 chrX 111109904 111111295 -55539001 - Lx5 LINE L1 0 7050 5676 1 1432 1790 313 40 19 chrX 111111501 111112148 -55538148 - Lx8 LINE L1 -644 6829 6169 1 1432 784 330 79 19 chrX 111112122 111112490 -55537806 - Lx8 LINE L1 -17 7456 7067 1 1432 294 129 0 0 chrX 111112511 111112573 -55537723 + (T)n Simple_repeat Simple_repeat 1 62 0 1 1432 279 153 68 14 chrX 111112642 111112715 -55537581 + Lx8 LINE L1 6127 6203 -1270 1 1432 593 244 235 21 chrX 111112741 111112984 -55537312 + Lx8 LINE L1 6567 6861 -612 1 1432 409 276 29 6 chrX 111113241 111113412 -55536884 - Lx8 LINE L1 -1571 5902 5728 1 1432 344 292 10 0 chrX 111113520 111113616 -55536680 - RSINE1 SINE B4 -4 161 65 1 1432 22 35 0 0 chrX 111113670 111113699 -55536597 + AT_rich Low_complexity Low_complexity 1 29 0 1 1432 273 241 45 22 chrX 111113707 111113796 -55536500 - L1MA5 LINE L1 -10 6290 6200 1 1432 441 305 71 21 chrX 111114070 111114408 -55535888 - L1M2 LINE L1 -1829 4314 3960 1 1432 302 287 65 16 chrX 111114931 111115055 -55535241 + LTR48B LTR ERV1 141 270 -374 1 1432 258 358 25 0 chrX 111115293 111115374 -55534922 - B1F1 SINE Alu -44 105 23 1 1432 409 260 131 46 chrX 111115761 111115914 -55534382 - MLT1E1A LTR MaLR -422 258 93 1 1432 243 173 0 0 chrX 111115982 111116034 -55534262 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1432 3603 63 21 2 chrX 111118340 111118813 -55531483 + RLTR45 LTR ERVK 1 482 0 1 1432 1967 130 49 0 chrX 111119168 111119476 -55530820 + ORR1A2 LTR MaLR 5 327 0 1 1432 9006 141 26 5 chrX 111119563 111121519 -55528777 + Lx4A LINE L1 5048 7058 0 1 1432 424 296 96 83 chrX 111121932 111122330 -55527966 + L1MA7 LINE L1 5862 6264 -27 1 1432 1143 269 82 12 chrX 111122343 111122671 -55527625 - Lx6 LINE L1 0 7460 7110 1 1432 1699 241 81 0 chrX 111122689 111123109 -55527187 - Lx6 LINE L1 -421 7039 6586 1 1432 2027 221 29 30 chrX 111123107 111123204 -55527092 + Lx6 LINE L1 5658 5755 -1705 1 1432 3299 137 129 31 chrX 111123204 111123546 -55526750 - RMER17A LTR ERVK 0 751 419 1 1432 730 58 19 0 chrX 111123546 111123650 -55526646 + (GA)n Simple_repeat Simple_repeat 2 107 0 1 1432 3299 137 129 31 chrX 111123650 111123991 -55526305 - RMER17A LTR ERVK -333 418 2 1 1432 2027 232 50 41 chrX 111123991 111124564 -55525732 + Lx6 LINE L1 5756 6352 -698 1 1432 385 310 97 34 chrX 111124613 111124850 -55525446 + Lx9 LINE L1 7209 7460 -184 1 1432 333 0 0 0 chrX 111124850 111124887 -55525409 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1432 381 43 0 0 chrX 111124912 111124959 -55525337 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1 1432 685 218 14 0 chrX 111124980 111125122 -55525174 - B1_Mur4 SINE Alu -6 144 1 1 1432 24 32 0 0 chrX 111125229 111125260 -55525036 + AT_rich Low_complexity Low_complexity 1 31 0 1 1432 25850 142 18 9 chrX 111125303 111131356 -55518940 - L1_Mus3 LINE L1 -12 6626 515 1 1432 540 360 39 60 chrX 111131356 111131584 -55518712 - L1M2 LINE L1 -3387 2756 2550 1 1432 1928 50 4 0 chrX 111131584 111131823 -55518473 - L1Md_T LINE L1 0 6582 6343 1 1432 540 360 39 60 chrX 111131823 111132108 -55518188 - L1M2 LINE L1 -3594 2549 2254 1 1432 588 265 109 11 chrX 111132151 111132334 -55517962 - B3 SINE B2 -7 209 9 1 1432 387 353 78 34 chrX 111132633 111133347 -55516949 - L1MEg LINE L1 -4579 1621 836 1 1432 21 0 0 0 chrX 111134854 111134875 -55515421 + AT_rich Low_complexity Low_complexity 1 21 0 1 1432 408 366 24 0 chrX 111135022 111135145 -55515151 - ID_B1 SINE B4 -8 216 91 1 1432 441 0 0 0 chrX 111135169 111135218 -55515078 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1 1432 647 258 18 6 chrX 111135314 111135478 -55514818 + Lx9 LINE L1 7101 7266 -378 1 1432 1005 194 212 3 chrX 111137723 111138039 -55512257 + Lx9 LINE L1 7262 7643 -1 1 1432 908 300 108 31 chrX 111138069 111139264 -55511032 + L1M2 LINE L1 3239 4525 -1618 1 1432 1005 259 102 64 chrX 111140183 111140712 -55509584 - L1_Mur2 LINE L1 -1315 4565 4017 1 1432 432 266 8 0 chrX 111140718 111140846 -55509450 - L1_Mur2 LINE L1 -1976 3904 3776 1 1432 489 286 37 60 chrX 111140844 111141208 -55509088 + Lx8 LINE L1 5746 6108 -1588 1 1432 1310 203 139 21 chrX 111141268 111141717 -55508579 - L1_Mur2 LINE L1 -6384 1344 889 1 1432 1931 323 89 16 chrX 111142269 111143258 -55507038 + Lx8 LINE L1 6281 7341 -132 1 1432 21 36 0 0 chrX 111143691 111143719 -55506577 + AT_rich Low_complexity Low_complexity 1 28 0 1 1432 336 273 174 0 chrX 111143921 111144042 -55506254 - MTD LTR MaLR -42 377 236 1 1432 405 0 0 0 chrX 111144074 111144119 -55506177 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1432 677 258 107 32 chrX 111144293 111144602 -55505694 - MTC-int LTR MaLR 0 1258 927 1 1432 29804 40 1 0 chrX 111144636 111148310 -55501986 + L1Md_T LINE L1 1910 5586 -297 1 22 8339 36 1 0 chrX 111148310 111149305 -55500991 + L1Md_T LINE L1 5587 6582 0 1 1433 1875 262 22 98 chrX 111149313 111150040 -55500256 - Lx9 LINE L1 -172 7472 6801 1 1433 282 125 0 0 chrX 111152151 111152199 -55498097 + (A)n Simple_repeat Simple_repeat 1 48 0 1 1433 1566 274 18 14 chrX 111152316 111152752 -55497544 + Lx9 LINE L1 6339 6776 -868 1 1433 23 0 0 0 chrX 111152840 111152863 -55497433 + AT_rich Low_complexity Low_complexity 1 23 0 1 1433 21 0 0 0 chrX 111154194 111154215 -55496081 + AT_rich Low_complexity Low_complexity 1 21 0 1 1433 698 322 72 18 chrX 111155531 111156090 -55494206 + L1M2 LINE L1 4869 5455 -425 1 1433 321 289 36 77 chrX 111156077 111156394 -55493902 + L1M2 LINE L1 5416 5721 -579 1 1433 252 0 0 0 chrX 111156415 111156443 -55493853 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 1433 495 0 0 0 chrX 111156458 111156513 -55493783 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 1433 237 184 0 0 chrX 111156642 111156680 -55493616 - U2 snRNA snRNA -150 38 1 1 1433 378 0 0 0 chrX 111157344 111157386 -55492910 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1433 241 308 13 13 chrX 111157855 111158013 -55492283 + L1M5 LINE L1 2955 3112 -3034 1 1433 705 209 8 0 chrX 111158247 111158381 -55491915 + Lx6 LINE L1 6521 6655 -805 1 1433 1599 66 9 9 chrX 111158458 111158672 -55491624 - L1Md_F2 LINE L1 -275 6307 6094 1 1433 2440 42 48 0 chrX 111158649 111158962 -55491334 + L1Md_F2 LINE L1 5807 6134 -448 1 1433 28 79 0 0 chrX 111159370 111159433 -55490863 + AT_rich Low_complexity Low_complexity 1 63 0 1 1433 33 43 0 0 chrX 111159478 111159525 -55490771 + AT_rich Low_complexity Low_complexity 1 47 0 1 1433 306 302 56 61 chrX 111160585 111160765 -55489531 + L1M5 LINE L1 5023 5201 -945 1 1433 400 256 22 58 chrX 111160804 111160940 -55489356 - ORR1D2 LTR MaLR -12 358 184 1 1433 393 221 11 44 chrX 111160940 111161030 -55489266 - Lx8 LINE L1 -1156 6317 6231 1 1433 26 0 0 0 chrX 111161055 111161081 -55489215 + AT_rich Low_complexity Low_complexity 1 26 0 1 1433 680 175 0 0 chrX 111161480 111161594 -55488702 - Lx2 LINE L1 -108 6889 6776 1 1433 805 163 7 7 chrX 111161593 111161735 -55488561 - Lx2 LINE L1 -352 6645 6504 1 1433 462 288 22 22 chrX 111161733 111161914 -55488382 - Lx7 LINE L1 -1875 5821 5641 1 1433 7797 132 39 14 chrX 111161918 111163773 -55486523 + Lx3B LINE L1 5069 6973 0 1 1433 249 227 161 8 chrX 111163861 111163989 -55486307 - L1M2 LINE L1 -684 5616 5467 1 1433 537 278 74 68 chrX 111163990 111164516 -55485780 + L1_Rod LINE L1 4825 5353 -494 1 1433 335 308 102 133 chrX 111164786 111165101 -55485195 - MLT1A LTR MaLR -11 363 59 1 1433 1937 109 10 0 chrX 111166382 111166675 -55483621 + L1_Mus3 LINE L1 6340 6635 -3 1 1433 1032 156 0 0 chrX 111167505 111167685 -55482611 + CT-rich Low_complexity Low_complexity 1 180 0 2 1433 856 91 8 8 chrX 111167685 111167818 -55482478 + (TTC)n Simple_repeat Simple_repeat 2 134 0 2 1433 186 43 0 0 chrX 111167913 111167936 -55482360 + (GA)n Simple_repeat Simple_repeat 1 23 0 2 1433 4218 59 45 4 chrX 111168152 111168714 -55481582 + L1_Mus2 LINE L1 5981 6565 -1 2 1433 28 29 0 0 chrX 111168714 111168749 -55481547 + AT_rich Low_complexity Low_complexity 1 35 0 2 1433 180 0 0 0 chrX 111169326 111169346 -55480950 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 2 1433 1550 284 86 7 chrX 111169412 111169996 -55480300 - Lx7 LINE L1 -1391 6305 5676 2 1433 879 116 0 30 chrX 111170002 111170135 -55480161 - L1_Mus3 LINE L1 -470 6168 6040 2 1433 3198 108 4 0 chrX 111170136 111170597 -55479699 + L1_Mus3 LINE L1 6170 6632 -6 2 1433 4282 247 34 11 chrX 111170599 111171872 -55478424 - Lx7 LINE L1 -202 5678 4377 2 1433 1234 314 53 20 chrX 111171897 111172346 -55477950 + Lx7 LINE L1 6341 6804 -892 2 1433 665 200 0 8 chrX 111172346 111172472 -55477824 - MTC LTR MaLR 0 421 297 2 1433 2438 43 0 0 chrX 111172472 111172772 -55477524 - L1Md_F2 LINE L1 -583 5999 5700 2 1433 4354 68 3 23 chrX 111172772 111173376 -55476920 + L1Md_F2 LINE L1 5991 6582 0 2 1433 1205 255 40 36 chrX 111173376 111173677 -55476619 - MTC LTR MaLR -109 312 11 2 1433 1235 295 66 27 chrX 111173696 111174183 -55476113 + Lx7 LINE L1 6816 7321 -375 2 1433 262 172 0 79 chrX 111174183 111174284 -55476012 + (TTTG)n Simple_repeat Simple_repeat 2 94 0 2 1433 23 33 0 0 chrX 111174386 111174416 -55475880 + AT_rich Low_complexity Low_complexity 1 30 0 2 1433 1566 307 58 17 chrX 111174859 111175866 -55474430 + Lx8 LINE L1 5163 6213 -1260 2 1433 32739 77 3 6 chrX 111175907 111181397 -55468899 + L1Md_T LINE L1 118 5586 -297 2 1433 8151 41 0 18 chrX 111181397 111182411 -55467885 + L1Md_T LINE L1 5587 6582 0 2 1433 210 37 0 0 chrX 111182426 111182453 -55467843 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1433 862 239 10 20 chrX 111182474 111182675 -55467621 - Lx6 LINE L1 -304 7156 6958 2 1433 379 298 74 85 chrX 111182759 111183030 -55467266 - L1M4 LINE L1 -2453 3693 3426 2 1433 188 170 0 19 chrX 111183179 111183233 -55467063 + CT-rich Low_complexity Low_complexity 4 56 0 2 1433 286 289 11 0 chrX 111183670 111183760 -55466536 - Lx2B LINE L1 -14 6986 6896 2 1433 5451 174 32 17 chrX 111183756 111185234 -55465062 - Lx2B LINE L1 -276 6724 5237 2 1433 2199 169 23 8 chrX 111185239 111185633 -55464663 - Lx3C LINE L1 -4 6972 6573 2 1433 2449 191 134 13 chrX 111185635 111186186 -55464110 - L1_Mur2 LINE L1 -187 5690 5073 2 1433 7200 131 41 48 chrX 111186185 111187554 -55462742 + L1_Mur1 LINE L1 3751 5109 -777 2 1433 832 118 73 0 chrX 111187550 111187686 -55462610 - Lx2B LINE L1 -630 5247 5102 2 1433 906 262 18 4 chrX 111187684 111187910 -55462386 + Lx6 LINE L1 7232 7460 0 2 1433 257 250 45 11 chrX 111187984 111188073 -55462223 - Lx7 LINE L1 0 7696 7605 2 1433 205 132 0 50 chrX 111188101 111188141 -55462155 + (TCTCTG)n Simple_repeat Simple_repeat 1 38 0 2 1433 788 292 62 13 chrX 111188191 111188500 -55461796 - Lx7 LINE L1 -365 7331 7008 2 1433 849 92 0 0 chrX 111189168 111189288 -55461008 + (TTTTC)n Simple_repeat Simple_repeat 2 121 0 2 1433 815 64 0 26 chrX 111189291 111189404 -55460892 - B1_Mus1 SINE Alu 0 148 39 2 1433 311 195 0 58 chrX 111189338 111189425 -55460871 - RLTR25A LTR ERVK -527 576 495 2 1433 1169 225 66 28 chrX 111189760 111190132 -55460164 + MTD LTR MaLR 1 412 -7 2 1433 335 368 72 24 chrX 111191291 111191583 -55458713 - L1M3c LINE L1 -1107 5103 4798 2 1433 3882 88 2 0 chrX 111191585 111192110 -55458186 - L1_Mus2 LINE L1 -408 6158 5633 2 1433 3067 85 0 49 chrX 111192110 111192557 -55457739 + L1_Mus2 LINE L1 6141 6565 -1 2 1433 285 330 0 22 chrX 111192628 111192718 -55457578 - B1_Mur2 SINE Alu -47 102 15 2 1433 507 292 138 44 chrX 111193150 111194003 -55456293 - L1M3c LINE L1 -1680 4524 3562 2 1433 629 102 55 9 chrX 111194003 111194112 -55456184 - Lx LINE L1 -7 6647 6534 2 1433 507 292 138 44 chrX 111194112 111194309 -55455987 - L1M3c LINE L1 -2643 3561 3375 2 1433 1053 304 65 15 chrX 111194349 111194690 -55455606 + MTD LTR MaLR 1 358 -61 2 1433 232 102 0 39 chrX 111194758 111194809 -55455487 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 2 1433 298 317 28 37 chrX 111194984 111195092 -55455204 - MIR SINE MIR -120 142 36 2 1433 1731 52 17 0 chrX 111195121 111195352 -55454944 - L1_Mus1 LINE L1 0 6567 6333 2 1433 296 98 0 17 chrX 111195352 111195401 -55454895 + L1_Mus1 LINE L1 6305 6359 -223 2 1433 257 91 21 64 chrX 111195477 111195571 -55454725 + T-rich Low_complexity Low_complexity 4 93 0 2 1433 925 106 42 0 chrX 111195571 111195713 -55454583 - B1_Mus1 SINE Alu 0 148 1 2 1433 6690 134 8 7 chrX 111195713 111197247 -55453049 - Lx LINE L1 -62 6592 5055 2 1433 395 357 95 48 chrX 111197265 111197812 -55452484 + L1M4c LINE L1 809 1381 -5003 2 1433 2888 163 6 20 chrX 111197900 111198402 -55451894 + Lx3C LINE L1 6477 6971 -5 2 1433 259 378 0 20 chrX 111198555 111198655 -55451641 - L1M3c LINE L1 -5123 1018 921 2 1433 470 125 12 0 chrX 111198813 111198893 -55451403 + (TTC)n Simple_repeat Simple_repeat 1 81 0 2 1433 7525 59 52 5 chrX 111198893 111200629 -55449667 - L1Md_F3 LINE L1 0 6584 4762 2 1433 3093 195 68 51 chrX 111200910 111201692 -55448604 - RLTR40 LTR ERVK -22 795 1 2 1433 29413 91 13 32 chrX 111201908 111207065 -55443231 + L1Md_F LINE L1 386 5447 -436 2 1433 512 72 29 0 chrX 111207055 111207124 -55443172 + L1Md_F2 LINE L1 6127 6197 -385 2 1433 1888 46 50 4 chrX 111207124 111207365 -55442931 + L1Md_F2 LINE L1 6321 6572 -10 2 1433 561 207 8 0 chrX 111207377 111207498 -55442798 + Lx6 LINE L1 5695 5816 -1234 2 1433 3478 72 2 2 chrX 111207487 111207936 -55442360 - L1Md_F2 LINE L1 -54 5829 5381 2 1433 5489 101 4 6 chrX 111207936 111208733 -55441563 + L1Md_F2 LINE L1 5788 6582 0 2 1433 2633 276 95 71 chrX 111208739 111209734 -55440562 + Lx6 LINE L1 5811 7118 -342 2 1433 357 24 0 0 chrX 111209734 111209776 -55440520 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1433 653 0 13 0 chrX 111209776 111209852 -55440444 + (TA)n Simple_repeat Simple_repeat 2 79 0 2 1433 2633 253 114 36 chrX 111209852 111210147 -55440149 + Lx6 LINE L1 7119 7432 -28 2 1433 459 157 0 33 chrX 111210143 111210235 -55440061 + L1_Mur3 LINE L1 3915 4003 -1877 2 1433 384 273 0 0 chrX 111210583 111210660 -55439636 + ID4_ SINE ID 3 79 -4 2 1433 3638 193 86 26 chrX 111211406 111212560 -55437736 + L1_Mur3 LINE L1 3988 5340 -540 2 1433 2764 267 27 26 chrX 111212528 111213338 -55436958 + Lx7 LINE L1 5983 6793 -903 2 1433 1331 229 48 69 chrX 111213351 111213726 -55436570 - ORR1B2 LTR MaLR 0 367 1 2 1433 430 316 19 68 chrX 111214365 111214572 -55435724 - B3A SINE B2 -1 197 1 2 1433 24 32 0 0 chrX 111214586 111214617 -55435679 + AT_rich Low_complexity Low_complexity 1 31 0 2 1433 225 65 0 0 chrX 111214727 111214758 -55435538 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1433 699 12 0 0 chrX 111214762 111214842 -55435454 + (GA)n Simple_repeat Simple_repeat 1 80 0 2 1433 511 320 26 86 chrX 111214883 111215187 -55435109 + B4A SINE B4 2 287 -5 2 1433 228 35 0 0 chrX 111215230 111215259 -55435037 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1433 1331 289 37 3 chrX 111215289 111215640 -55434656 + ORR1D2 LTR MaLR 8 370 0 2 1433 37388 18 0 7 chrX 111215661 111220845 -55429451 + L1Md_A LINE L1 444 5586 -297 2 1433 8637 19 1 0 chrX 111220845 111221840 -55428456 + L1Md_A LINE L1 5587 6582 0 2 1433 2366 60 0 3 chrX 111221840 111222142 -55428154 + L1_Mus1 LINE L1 6266 6566 -1 2 1433 22 35 0 0 chrX 111222272 111222301 -55427995 + AT_rich Low_complexity Low_complexity 1 29 0 2 1433 282 336 52 52 chrX 111222708 111222843 -55427453 - LTR16C LTR ERVL -118 371 237 2 1433 223 321 76 6 chrX 111223056 111223213 -55427083 + L2a LINE L2 3258 3425 -1 2 1433 1061 304 70 48 chrX 111223516 111224135 -55426161 - Lx8 LINE L1 -2 7471 6840 2 1433 395 289 0 0 chrX 111225374 111225457 -55424839 - B3A SINE B2 -115 83 1 2 1433 3132 30 3 0 chrX 111225495 111225868 -55424428 - L1Md_A LINE L1 -1 6581 6208 2 1433 738 293 130 23 chrX 111226765 111227060 -55423236 - MTD LTR MaLR -62 357 10 2 1433 1004 76 38 8 chrX 111227285 111227418 -55422878 + B1_Mus2 SINE Alu 1 137 -10 2 1433 794 200 7 0 chrX 111227626 111227766 -55422530 + ORR1B2 LTR MaLR 1 141 -226 2 1433 325 177 95 80 chrX 111227766 111227888 -55422408 + RMER16 LTR ERVK 192 305 -228 2 1433 925 207 37 37 chrX 111227969 111228210 -55422086 + RMER16 LTR ERVK 293 533 0 2 1433 1028 210 22 52 chrX 111228210 111228441 -55421855 + ORR1B2 LTR MaLR 136 359 -8 2 1433 4857 226 25 41 chrX 111229548 111231144 -55419152 + Lx7 LINE L1 4553 6132 -1564 2 1433 3622 210 116 25 chrX 111231150 111232057 -55418239 + Lx7 LINE L1 6597 7575 -121 2 1433 2481 140 17 0 chrX 111232057 111232464 -55417832 - Lx LINE L1 -7 6647 6234 2 1433 3622 210 116 25 chrX 111232464 111232563 -55417733 + Lx7 LINE L1 7576 7694 -2 2 1433 231 136 29 57 chrX 111232790 111232860 -55417436 + A-rich Low_complexity Low_complexity 3 70 0 2 1433 236 263 61 73 chrX 111232982 111233064 -55417232 + ID4_ SINE ID 2 82 -1 2 1433 560 335 35 0 chrX 111233438 111233641 -55416655 + B3 SINE B2 2 211 -5 2 1433 462 281 66 7 chrX 111233664 111233800 -55416496 + B1_Mus2 SINE Alu 1 144 -3 2 1433 514 318 19 32 chrX 111233857 111234013 -55416283 + RSINE1 SINE B4 2 155 -10 2 1433 372 250 0 32 chrX 111234283 111234353 -55415943 + B1_Mur3 SINE Alu 48 117 -32 2 1433 600 14 0 0 chrX 111234353 111234422 -55415874 + (CA)n Simple_repeat Simple_repeat 2 70 0 2 1433 438 20 0 0 chrX 111234422 111234472 -55415824 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 1433 372 250 0 32 chrX 111234472 111234495 -55415801 + B1_Mur3 SINE Alu 118 138 -11 2 1433 252 0 0 0 chrX 111234495 111234523 -55415773 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 1433 551 208 45 30 chrX 111235469 111235603 -55414693 - ORR1C2 LTR MaLR 0 384 249 2 1433 4315 104 32 0 chrX 111235603 111236268 -55414028 + Lx3_Mus LINE L1 6100 6785 -224 2 1433 742 266 21 39 chrX 111236281 111236627 -55413669 - L1_Rod LINE L1 -270 5610 5260 2 1433 1648 255 15 8 chrX 111236708 111237099 -55413197 - MTD LTR MaLR -8 411 18 2 1433 1485 269 55 29 chrX 111237142 111237629 -55412667 - MTD-int LTR MaLR -8 1250 751 2 1433 360 0 0 0 chrX 111237643 111237683 -55412613 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1433 25 31 0 0 chrX 111238284 111238316 -55411980 + AT_rich Low_complexity Low_complexity 1 32 0 2 1433 297 75 0 0 chrX 111238360 111238400 -55411896 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 1433 6779 79 20 5 chrX 111238454 111239456 -55410840 - L1Md_F2 LINE L1 -14 6568 5553 2 1433 2063 148 11 14 chrX 111239456 111239815 -55410481 + RLTR13D2 LTR ERVK 545 942 -81 2 1433 6685 95 12 6 chrX 111239908 111241005 -55409291 - L1_Mus2 LINE L1 -1 6565 5460 2 1433 256 198 196 56 chrX 111241005 111241112 -55409184 + RLTR6_Mm LTR ERV1 1 122 -532 2 1433 2415 111 228 27 chrX 111241114 111241588 -55408708 + RLTR6_Mm LTR ERV1 37 605 -49 2 1433 63781 21 12 0 chrX 111241588 111249275 -55401021 + RLTR6-int LTR ERV1 1 7778 0 2 1433 246 208 196 56 chrX 111249275 111249382 -55400914 + RLTR6_Mm LTR ERV1 1 122 -532 2 1433 2331 105 239 26 chrX 111249384 111249836 -55400460 + RLTR6_Mm LTR ERV1 37 584 -70 2 1433 4145 99 29 1 chrX 111249837 111250483 -55399813 - L1_Mm LINE L1 -421 5462 4799 2 1433 1905 106 0 10 chrX 111250477 111250781 -55399515 + L1_Mm LINE L1 4491 4791 -1092 2 1433 545 156 0 22 chrX 111250782 111250874 -55399422 + RLTR13D2 LTR ERVK 894 983 0 2 1433 356 149 30 0 chrX 111250884 111250951 -55399345 - Lx7 LINE L1 -928 6768 6700 3 1433 1123 242 33 7 chrX 111250953 111251257 -55399039 + Lx7 LINE L1 6929 7240 -456 3 1433 1068 156 0 0 chrX 111252013 111252315 -55397981 + (CA)n Simple_repeat Simple_repeat 1 302 0 3 1433 1006 111 77 0 chrX 111252624 111252805 -55397491 + L1_Mus3 LINE L1 6443 6637 -1 3 1433 1590 169 21 63 chrX 111252817 111253152 -55397144 - RMER6A LTR ERVK -435 321 1 3 1433 33723 36 0 0 chrX 111253814 111259257 -55391039 + L1Md_T LINE L1 50 5589 -297 3 1433 9034 5 0 0 chrX 111259257 111260253 -55390043 + L1Md_T LINE L1 5590 6585 0 3 1433 237 269 0 0 chrX 111260590 111260657 -55389639 + Lx7 LINE L1 7250 7316 -380 3 1433 22 56 0 0 chrX 111260700 111260736 -55389560 + AT_rich Low_complexity Low_complexity 1 36 0 3 1433 840 258 0 5 chrX 111260739 111260953 -55389343 - MERVL_2A-int LTR ERVL -5215 546 334 3 1433 22 0 0 0 chrX 111260974 111260996 -55389300 + AT_rich Low_complexity Low_complexity 1 22 0 3 1433 5933 118 57 3 chrX 111261023 111262559 -55387737 - L1_Mus3 LINE L1 -10 6628 5012 3 1433 5834 142 21 12 chrX 111262557 111263641 -55386655 + L1_Mm LINE L1 3412 4505 -1378 3 1433 8280 114 14 8 chrX 111263637 111265096 -55385200 - MusHAL1 LINE L1 -1260 2093 626 3 1433 317 198 97 186 chrX 111265097 111265221 -55385075 + L1VL1 LINE L1 189 301 -6121 3 1433 833 206 45 5 chrX 111265223 111265423 -55384873 - MERVL_2A-int LTR ERVL -5412 349 142 3 1433 510 189 0 0 chrX 111265429 111265524 -55384772 + MERVL_2A-int LTR ERVL 748 842 -4919 3 1433 595 167 9 0 chrX 111265524 111265632 -55384664 - RMER17B LTR ERVK 0 958 850 3 1433 3801 161 89 10 chrX 111265786 111266213 -55384083 - RMER17B LTR ERVK -2 956 413 3 1433 510 17 0 0 chrX 111266213 111266272 -55384024 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 1433 3801 160 104 10 chrX 111266272 111266644 -55383652 - RMER17B LTR ERVK -546 412 3 3 1433 2427 174 25 12 chrX 111266652 111267135 -55383161 + MERVL_2A-int LTR ERVL 841 1329 -4432 3 1433 1633 235 86 2 chrX 111267236 111267876 -55382420 + MERVL_2A-int LTR ERVL 3545 4238 -1523 3 1433 661 205 8 8 chrX 111268212 111268335 -55381961 - B1_Mm SINE Alu -23 124 2 3 1433 244 300 23 77 chrX 111268335 111268369 -55381927 + YREP_Mm Unknown Unknown 318 344 -1468 3 1433 1079 247 24 10 chrX 111268722 111269012 -55381284 + MERVL_2A-int LTR ERVL 4214 4507 -1254 3 1433 12275 78 2 8 chrX 111269038 111270815 -55379481 - L1_Mm LINE L1 -1518 4365 2601 3 1433 2659 51 102 0 chrX 111271564 111271916 -55378380 - RLTR10 LTR ERVK -2 388 1 3 1433 289 356 63 38 chrX 111272283 111272583 -55377713 + MER2 DNA MER2_type 10 345 0 3 1433 542 299 47 14 chrX 111273073 111273264 -55377032 - Lx5 LINE L1 -7 7051 6829 3 1433 378 61 0 0 chrX 111273270 111273319 -55376977 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1433 406 172 11 0 chrX 111273663 111273756 -55376540 - L1_Mus4 LINE L1 -101 6535 6442 3 1433 638 294 76 19 chrX 111273767 111274118 -55376178 - L1MA5A LINE L1 -1599 5861 5498 3 1433 1477 271 52 11 chrX 111274119 111274596 -55375700 + Lx8 LINE L1 6564 7060 -413 3 1433 576 329 52 45 chrX 111274647 111275338 -55374958 + L1M3 LINE L1 4232 4927 -1213 3 179 28731 106 5 17 chrX 111275490 111281716 -55368580 + L1_Mus1 LINE L1 410 6564 -3 3 1434 21 0 0 0 chrX 111281721 111281742 -55368554 + AT_rich Low_complexity Low_complexity 1 21 0 3 1434 426 196 0 0 chrX 111282029 111282121 -55368175 + T-rich Low_complexity Low_complexity 1 92 0 3 1434 346 38 19 19 chrX 111282406 111282459 -55367837 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1434 1250 291 56 20 chrX 111282588 111282761 -55367535 - ORR1D2 LTR MaLR 0 370 180 3 1434 648 0 0 0 chrX 111282761 111282833 -55367463 + (GA)n Simple_repeat Simple_repeat 1 72 0 3 1434 1250 291 56 20 chrX 111282833 111283016 -55367280 - ORR1D2 LTR MaLR -191 179 1 3 1434 370 298 117 31 chrX 111283781 111283798 -55366498 - B4 SINE B4 -69 223 87 3 1434 539 262 0 18 chrX 111283798 111283907 -55366389 - B1_Mur1 SINE Alu -36 113 7 3 1434 22 56 0 0 chrX 111285335 111285371 -55364925 + AT_rich Low_complexity Low_complexity 1 36 0 3 1434 450 0 0 0 chrX 111286228 111286278 -55364018 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1434 608 241 6 115 chrX 111286559 111286742 -55363554 + RMER5 LTR ERV1 14 176 -358 3 1434 324 301 54 88 chrX 111287141 111287157 -55363139 + B4 SINE B4 70 125 -167 3 1434 550 249 0 51 chrX 111287157 111287309 -55362987 + B1_Mur2 SINE Alu 4 140 -9 3 1434 324 301 54 88 chrX 111287309 111287345 -55362951 + B4 SINE B4 126 266 -26 3 1434 1955 130 0 23 chrX 111287345 111287645 -55362651 + Lx LINE L1 6092 6384 -270 3 1434 5077 56 0 0 chrX 111287643 111288281 -55362015 + L1Md_F2 LINE L1 4949 5586 -297 3 1434 8400 35 0 3 chrX 111288282 111289280 -55361016 + L1Md_F2 LINE L1 5588 6582 0 3 1434 1221 116 67 59 chrX 111289297 111289423 -55360873 + Lx LINE L1 6396 6518 -136 3 1434 252 0 0 0 chrX 111289423 111289451 -55360845 + (TGGG)n Simple_repeat Simple_repeat 2 29 0 3 1434 1221 116 67 59 chrX 111289451 111289563 -55360733 + Lx LINE L1 6519 6635 -19 3 1434 973 106 35 0 chrX 111289582 111289724 -55360572 + B1_Mus1 SINE Alu 2 148 0 3 1434 288 176 0 0 chrX 111289727 111289795 -55360501 + A-rich Low_complexity Low_complexity 1 68 0 3 1434 21 0 0 0 chrX 111289885 111289906 -55360390 + AT_rich Low_complexity Low_complexity 1 21 0 3 1434 363 44 0 0 chrX 111290043 111290088 -55360208 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 1434 4122 148 66 48 chrX 111290101 111290358 -55359938 - L1_Mur2 LINE L1 -1679 4198 3953 3 1434 4205 102 7 0 chrX 111290358 111290937 -55359359 - MT2B2 LTR ERVL -1 583 1 3 1434 4122 148 66 48 chrX 111290937 111291537 -55358759 - L1_Mur2 LINE L1 -1925 3952 3325 3 1434 4759 67 3 77 chrX 111291524 111292029 -55358267 + L1Md_F2 LINE L1 643 1138 -5586 3 1434 1683 16 0 0 chrX 111292029 111292221 -55358075 + B2_Mm1a SINE B2 2 193 0 3 1434 34839 46 0 3 chrX 111292221 111296717 -55353579 + L1Md_F2 LINE L1 1139 5586 -297 3 1434 7834 54 2 3 chrX 111296717 111297714 -55352582 + L1Md_F2 LINE L1 5587 6582 0 3 1434 824 123 92 6 chrX 111297714 111297878 -55352418 - L1_Mur2 LINE L1 -2527 3350 3173 3 1434 6906 174 19 32 chrX 111297898 111300138 -55350158 - Lx3C LINE L1 -2 6974 4761 3 1434 1826 42 4 62 chrX 111300579 111300836 -55349460 - L1Md_F3 LINE L1 -1 6583 6342 3 1434 2776 50 16 109 chrX 111300836 111301266 -55349030 - RLTR10 LTR ERVK 0 390 1 3 1434 15956 29 43 3 chrX 111301266 111303193 -55347103 - RLTR10-int LTR ERVK -1 1986 10 3 1434 2776 50 16 109 chrX 111303195 111303625 -55346671 - RLTR10 LTR ERVK 0 390 1 3 1434 6106 49 5 0 chrX 111303625 111304625 -55345671 - L1Md_F2 LINE L1 -234 6348 5345 3 1434 370 303 18 49 chrX 111304747 111304910 -55345386 + L1MB8 LINE L1 5716 5873 -305 3 1434 1768 222 37 22 chrX 111304960 111305361 -55344935 - MTD LTR MaLR -8 411 5 3 1434 240 348 59 4 chrX 111305362 111305616 -55344680 + L1MB8 LINE L1 5914 6181 -2 3 1434 609 283 0 0 chrX 111305627 111305772 -55344524 + B1_Mur1 SINE Alu 2 146 -3 3 1434 3208 170 9 79 chrX 111305780 111306269 -55344027 + MT2B LTR ERVL 1 451 -150 3 1434 3386 33 0 2 chrX 111306269 111306666 -55343630 - MTA_Mm LTR MaLR 0 396 1 3 1434 3208 170 9 79 chrX 111306666 111306822 -55343474 + MT2B LTR ERVL 452 601 0 3 1434 4504 59 0 0 chrX 111306931 111307491 -55342805 - L1Md_F2 LINE L1 -3 6579 6020 3 1434 255 382 44 7 chrX 111308040 111308177 -55342119 + MIR SINE MIR 1 142 -120 3 1434 206 302 16 16 chrX 111308192 111308256 -55342040 + MIR SINE MIR 199 262 0 3 1434 1692 45 81 0 chrX 111309078 111309301 -55340995 + L1Md_F3 LINE L1 6330 6570 -14 3 1434 420 20 0 0 chrX 111309409 111309458 -55340838 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1434 324 298 80 27 chrX 111309632 111309856 -55340440 - Lx9 LINE L1 -58 7586 7351 3 1434 1749 199 16 0 chrX 111310297 111310619 -55339677 - RMER6D LTR ERVK 0 720 394 3 1434 52 17 0 0 chrX 111310620 111310679 -55339617 + AT_rich Low_complexity Low_complexity 1 59 0 3 1434 1691 362 112 27 chrX 111310679 111311618 -55338678 + MTE-int LTR MaLR 223 1203 -377 3 1434 202 233 16 16 chrX 111312272 111312333 -55337963 + GA-rich Low_complexity Low_complexity 1 61 0 3 1434 423 0 0 0 chrX 111312898 111312945 -55337351 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 1434 294 29 0 0 chrX 111312945 111312979 -55337317 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1434 259 139 0 0 chrX 111313468 111313511 -55336785 + B1_Mur2 SINE Alu 106 148 -1 3 1434 441 0 0 0 chrX 111313660 111313709 -55336587 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1434 1363 85 0 11 chrX 111313872 111314062 -55336234 + B2_Mm2 SINE B2 2 189 -6 3 1434 1883 239 80 18 chrX 111314355 111314858 -55335438 - RMER5 LTR ERV1 0 534 1 3 1434 192 77 0 0 chrX 111314925 111314951 -55335345 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 3 1434 2146 223 14 70 chrX 111314980 111315535 -55334761 - RMER5 LTR ERV1 -8 526 3 3 1434 349 281 28 74 chrX 111315693 111315908 -55334388 + L1MA8 LINE L1 5041 5245 -898 3 1434 987 294 91 73 chrX 111315920 111316691 -55333605 + L1MA8 LINE L1 5330 6114 -177 3 1434 258 376 12 53 chrX 111316708 111316879 -55333417 + RSINE1 SINE B4 2 165 0 3 1434 24 53 0 0 chrX 111316922 111316960 -55333336 + AT_rich Low_complexity Low_complexity 1 38 0 3 1434 1394 225 121 25 chrX 111317009 111317565 -55332731 - L1_Mur3 LINE L1 -4024 1856 1248 3 1434 23 33 0 0 chrX 111317850 111317880 -55332416 + AT_rich Low_complexity Low_complexity 1 30 0 3 1434 9153 136 24 27 chrX 111317904 111319801 -55330495 + L1VL4 LINE L1 134 2033 -1526 3 1434 4539 78 0 10 chrX 111319801 111320419 -55329877 + L1Md_F2 LINE L1 5971 6582 0 3 1434 9153 112 13 21 chrX 111320419 111320751 -55329545 + L1VL4 LINE L1 2034 2379 -1180 3 1434 7676 165 8 4 chrX 111320749 111322962 -55327334 + Lx LINE L1 4430 6649 -5 3 1434 26 0 0 0 chrX 111323270 111323296 -55327000 + AT_rich Low_complexity Low_complexity 1 26 0 3 1434 24 0 0 0 chrX 111323693 111323717 -55326579 + AT_rich Low_complexity Low_complexity 1 24 0 3 1434 2551 82 3 0 chrX 111324016 111324356 -55325940 - ORR1A1 LTR MaLR 0 346 6 3 1434 32581 89 2 6 chrX 111324637 111325661 -55324635 - L1Md_F2 LINE L1 -10 6572 5558 3 1434 3643 18 121 0 chrX 111325661 111326101 -55324195 - MT2_Mm LTR ERVL 0 493 1 3 1434 32581 96 8 11 chrX 111326101 111331118 -55319178 - L1Md_F2 LINE L1 -326 5557 550 3 1434 315 211 38 19 chrX 111331321 111331427 -55318869 - L1_Rod LINE L1 -497 5350 5243 3 1434 468 0 0 0 chrX 111331473 111331525 -55318771 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1434 1908 174 47 35 chrX 111331525 111331930 -55318366 + Lx3C LINE L1 6564 6973 -3 3 1434 21 0 0 0 chrX 111331985 111332006 -55318290 + AT_rich Low_complexity Low_complexity 1 21 0 3 1434 496 330 89 25 chrX 111332495 111332905 -55317391 + MuRRS4-int LTR ERV1 1014 1646 -6132 3 1434 276 202 24 12 chrX 111333337 111333422 -55316874 + Lx3C LINE L1 6888 6973 -3 3 1434 630 343 85 54 chrX 111333524 111334969 -55315327 + MuRRS4-int LTR ERV1 2134 3593 -4013 3 1434 936 326 68 46 chrX 111334982 111336618 -55313678 + MuRRS4-int LTR ERV1 3536 5398 -2380 3 1434 256 315 0 0 chrX 111336813 111336886 -55313410 + MuRRS4-int LTR ERV1 5508 5580 -2026 3 1434 522 0 0 0 chrX 111336901 111336959 -55313337 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 1434 1045 174 77 17 chrX 111337413 111337652 -55312644 + LTRIS5 LTR ERV1 217 605 -49 3 1434 815 138 106 6 chrX 111338342 111338503 -55311793 + RMER16-int LTR ERVK 141 317 -5089 3 1434 700 78 10 10 chrX 111338510 111338613 -55311683 + RMER16-int LTR ERVK 795 897 -4509 3 1434 1052 129 150 33 chrX 111338593 111338951 -55311345 + RMER16-int LTR ERVK 1040 1439 -3967 3 1434 276 320 124 10 chrX 111338972 111339174 -55311122 + RLTR6-int LTR ERV1 1418 1642 -6136 4 1434 2173 112 162 30 chrX 111339206 111339777 -55310519 + MuRRS4-int LTR ERV1 1936 2475 -2588 4 1434 1154 89 0 0 chrX 111339774 111339932 -55310364 + MuRRS4-int LTR ERV1 2728 2885 -2178 4 1434 3382 104 61 21 chrX 111339932 111340493 -55309803 + ORR1A3-int LTR MaLR 942 1524 -439 4 1434 639 311 137 13 chrX 111340494 111340971 -55309325 + MuRRS4-int LTR ERV1 3727 4262 -801 4 1434 253 143 0 0 chrX 111341006 111341048 -55309248 + RLTR6-int LTR ERV1 7737 7778 0 4 1434 1152 153 27 23 chrX 111341093 111341313 -55308983 + LTRIS5 LTR ERV1 227 447 0 4 1434 343 347 22 11 chrX 111341590 111341768 -55308528 + RLTR4_MM-int LTR ERV1 7113 7292 -309 4 1434 655 279 61 11 chrX 111342539 111342794 -55307502 + MT2A LTR ERVL 214 594 -7 4 1434 1725 286 63 65 chrX 111342832 111342899 -55307397 + Lx8 LINE L1 6567 6625 -848 4 1434 858 313 59 36 chrX 111342899 111343257 -55307039 + ORR1D2 LTR MaLR 2 367 -3 4 1434 1725 286 63 65 chrX 111343257 111343907 -55306389 + Lx8 LINE L1 6626 7282 -191 4 1434 21 0 0 0 chrX 111344010 111344031 -55306265 + AT_rich Low_complexity Low_complexity 1 21 0 4 1434 268 264 14 0 chrX 111345101 111345173 -55305123 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 1434 1383 128 167 0 chrX 111345545 111345922 -55304374 + RLTR47_MM LTR ERV1 1 520 -12 4 1434 530 95 0 0 chrX 111345920 111345994 -55304302 - B1_Mus2 SINE Alu -6 141 68 4 1434 23 0 0 0 chrX 111346346 111346369 -55303927 + AT_rich Low_complexity Low_complexity 1 23 0 4 1434 461 114 0 25 chrX 111346472 111346553 -55303743 - L1_Mus1 LINE L1 -405 6162 6084 4 1434 2754 80 29 58 chrX 111346553 111347291 -55303005 + L1_Mus1 LINE L1 6158 6567 0 4 1434 361 148 25 0 chrX 111347733 111347814 -55302482 + (TAGA)n Simple_repeat Simple_repeat 2 84 0 4 1434 351 356 40 14 chrX 111347861 111348009 -55302287 - MER76 LTR ERVL -539 152 1 4 1434 1019 203 128 46 chrX 111349735 111350040 -55300256 + IAPEY3_LTR LTR ERVK 3 332 0 4 1434 361 261 50 43 chrX 111351068 111351208 -55299088 - MTEa LTR MaLR -2 377 237 4 1434 480 304 242 28 chrX 111351316 111351634 -55298662 - L1MC3 LINE L1 -945 6840 6455 4 1434 1074 47 20 20 chrX 111352019 111352172 -55298124 + L1Md_F2 LINE L1 6430 6582 0 4 1434 21 0 0 0 chrX 111352539 111352560 -55297736 + AT_rich Low_complexity Low_complexity 1 21 0 4 1434 4477 134 59 22 chrX 111352709 111353547 -55296749 + RMER17B LTR ERVK 1 958 0 4 1434 5994 8 0 0 chrX 111354000 111354663 -55295633 - L1Md_T LINE L1 0 6582 5920 4 1434 1194 87 0 0 chrX 111354721 111354894 -55295402 + (TTTC)n Simple_repeat Simple_repeat 4 176 0 4 1434 679 281 156 7 chrX 111355185 111355468 -55294828 - MTD LTR MaLR 0 419 95 4 1434 1236 83 0 6 chrX 111355766 111355936 -55294360 + L1_Mus2 LINE L1 6398 6566 0 4 1434 2568 174 33 40 chrX 111355988 111356773 -55293523 - Lx2B LINE L1 -817 6183 5424 4 1434 759 215 19 19 chrX 111356758 111357047 -55293249 + Lx4B LINE L1 6675 7052 -6 4 1434 23 33 0 0 chrX 111357156 111357186 -55293110 + AT_rich Low_complexity Low_complexity 1 30 0 4 1434 323 244 39 31 chrX 111357724 111357851 -55292445 - L1M6 LINE L1 -4633 1863 1736 4 1434 449 348 11 32 chrX 111358148 111358427 -55291869 + Lx8 LINE L1 7074 7346 -127 4 1434 411 38 0 0 chrX 111359016 111359069 -55291227 + (TTA)n Simple_repeat Simple_repeat 1 53 0 4 1434 21 0 0 0 chrX 111359153 111359174 -55291122 + AT_rich Low_complexity Low_complexity 1 21 0 4 1434 378 270 0 11 chrX 111359846 111359936 -55290360 + MERVL_2A-int LTR ERVL 2568 2656 -3058 4 1434 2831 92 117 4 chrX 111359937 111360063 -55290233 + RLTR47_MM LTR ERV1 1 144 -388 4 1434 351 0 0 0 chrX 111360063 111360102 -55290194 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1434 2831 92 117 4 chrX 111360102 111360447 -55289849 + RLTR47_MM LTR ERV1 145 524 -8 4 1434 421 285 30 37 chrX 111360735 111361005 -55289291 + MuRRS4-int LTR ERV1 525 872 -6906 4 1434 843 320 79 53 chrX 111361358 111362595 -55287701 + MuRRS4-int LTR ERV1 1133 2371 -5235 4 1434 644 138 203 0 chrX 111362598 111362736 -55287560 + RLTR47_MM LTR ERV1 354 519 -13 4 1434 1507 251 28 36 chrX 111362772 111363244 -55287052 + MERVL_2A-int LTR ERVL 2818 3285 -2476 4 1434 21 57 0 0 chrX 111364072 111364107 -55286189 + AT_rich Low_complexity Low_complexity 1 35 0 4 1434 271 215 37 25 chrX 111364205 111364286 -55286010 - L1_Mur3 LINE L1 -696 5184 5103 4 1434 34248 45 5 9 chrX 111364635 111370309 -55279987 + L1Md_T LINE L1 1 5585 -298 4 1434 8291 40 0 2 chrX 111370310 111371308 -55278988 + L1Md_T LINE L1 5587 6582 0 4 1434 865 259 27 0 chrX 111371335 111371520 -55278776 + B3 SINE B2 27 216 0 4 1434 774 0 0 0 chrX 111371697 111371783 -55278513 + (GAA)n Simple_repeat Simple_repeat 3 88 0 4 1434 189 0 0 0 chrX 111371783 111371804 -55278492 + (CAG)n Simple_repeat Simple_repeat 1 21 0 4 1434 382 143 0 25 chrX 111371803 111371882 -55278414 + G-rich Low_complexity Low_complexity 5 81 0 4 1434 933 9 0 0 chrX 111372007 111372113 -55278183 + (GAAA)n Simple_repeat Simple_repeat 3 108 0 4 1434 9079 102 2 5 chrX 111372234 111374297 -55275999 - L1_Mus1 LINE L1 -84 6483 4427 4 1434 36211 30 1 0 chrX 111374297 111381635 -55268661 - L1Md_T LINE L1 0 6585 1 4 1434 1340 117 0 0 chrX 111381636 111381850 -55268446 - L1_Mus1 LINE L1 -1441 4442 4229 4 1434 3839 102 2 22 chrX 111381845 111382467 -55267829 + L1_Mus1 LINE L1 3646 4254 -1629 4 1434 1005 81 7 0 chrX 111382463 111382612 -55267684 - Lx4B LINE L1 -1133 5925 5776 4 1434 545 276 0 18 chrX 111382644 111382810 -55267486 - Lx8 LINE L1 -985 6488 6326 4 1434 767 315 53 25 chrX 111383073 111383633 -55266663 - Lx8 LINE L1 -1548 5925 5316 4 1434 230 238 0 16 chrX 111384655 111384719 -55265577 - L1M4 LINE L1 -1469 4677 4615 4 1434 478 347 103 23 chrX 111384924 111385240 -55265056 - L1M4 LINE L1 -1648 4498 4160 4 1434 359 38 0 37 chrX 111385240 111385294 -55265002 + (TATG)n Simple_repeat Simple_repeat 2 53 0 4 1434 433 347 104 23 chrX 111385294 111385367 -55264929 - L1M4 LINE L1 -1984 4159 4075 4 1434 365 284 43 21 chrX 111385409 111385596 -55264700 - L1M4c LINE L1 -3390 2992 2802 4 1434 459 279 6 71 chrX 111385596 111385766 -55264530 - MLT1B-int LTR MaLR -1555 180 22 4 1434 583 338 68 7 chrX 111385788 111386098 -55264198 - MLT1B LTR MaLR -3 387 59 4 1434 427 305 126 48 chrX 111386157 111386823 -55263473 - L1M4c LINE L1 -3555 2827 2108 4 1434 789 323 30 0 chrX 111387412 111387709 -55262587 - Lx8 LINE L1 -349 7124 6819 4 1434 21 0 0 0 chrX 111387758 111387779 -55262517 + AT_rich Low_complexity Low_complexity 1 21 0 4 1434 370 326 92 0 chrX 111387907 111388048 -55262248 - L1M4c LINE L1 -4865 1519 1366 4 1434 861 323 50 34 chrX 111388050 111388515 -55261781 + Lx6 LINE L1 6987 7458 -2 4 1434 2896 130 108 10 chrX 111388730 111389221 -55261075 + Lx LINE L1 6104 6642 -12 4 1434 31068 83 5 3 chrX 111389989 111395211 -55255085 + L1Md_F2 LINE L1 352 5586 -297 4 1434 8262 41 0 6 chrX 111395212 111396210 -55254086 + L1Md_F2 LINE L1 5588 6579 -3 4 1434 683 296 5 53 chrX 111396823 111397030 -55253266 - B3A SINE B2 -1 197 1 4 1434 1136 269 104 24 chrX 111397258 111397501 -55252795 + Lx8 LINE L1 6973 7230 -243 4 1434 909 91 103 7 chrX 111397501 111397656 -55252640 - L1_Mus3 LINE L1 0 6638 6469 4 1434 1136 269 104 24 chrX 111397656 111397873 -55252423 + Lx8 LINE L1 7231 7469 -4 4 1434 255 31 0 0 chrX 111398553 111398585 -55251711 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 1434 23 54 0 0 chrX 111399321 111399358 -55250938 + AT_rich Low_complexity Low_complexity 1 37 0 4 1434 1778 48 4 4 chrX 111399397 111399629 -55250667 - L1_Mus2 LINE L1 0 6566 6335 4 1434 7096 169 24 53 chrX 111399654 111401161 -55249135 - Lx3C LINE L1 0 6976 5513 4 1434 962 241 37 120 chrX 111403214 111403716 -55246580 - RMER17C LTR ERVK -336 473 1 4 1434 204 125 0 0 chrX 111403944 111403976 -55246320 + (TTC)n Simple_repeat Simple_repeat 2 33 0 4 1434 778 283 10 0 chrX 111404011 111404216 -55246080 - B3 SINE B2 -9 207 1 4 1434 3160 118 17 0 chrX 111404518 111404991 -55245305 - Lx2 LINE L1 -1 6996 6516 4 1434 1341 194 93 28 chrX 111405136 111405194 -55245102 - ORR1C1 LTR MaLR 0 378 322 4 1434 549 0 0 0 chrX 111405194 111405255 -55245041 + (GAA)n Simple_repeat Simple_repeat 1 61 0 4 1434 1341 194 93 28 chrX 111405255 111405551 -55244745 - ORR1C1 LTR MaLR -57 321 1 4 1434 698 320 102 19 chrX 111405570 111405895 -55244401 + ORR1D2 LTR MaLR 19 370 0 4 1434 776 245 166 23 chrX 111405899 111406158 -55244138 - MTE-int LTR MaLR -87 1493 1198 4 1434 1098 96 102 0 chrX 111406627 111406794 -55243502 + B2_Mm2 SINE B2 1 184 -11 4 1434 203 161 0 0 chrX 111407351 111407382 -55242914 + (CATA)n Simple_repeat Simple_repeat 1 31 0 4 1434 2779 27 0 45 chrX 111409537 111409890 -55240406 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1434 7790 31 4 5 chrX 111409890 111410810 -55239486 - IAPEz-int LTR ERVK 0 6481 5563 4 179 33986 24 24 9 chrX 111410803 111414799 -55235497 - IAPEz-int LTR ERVK -2422 4059 8 4 1435 2779 27 0 45 chrX 111414799 111415152 -55235144 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1435 1381 65 0 21 chrX 111415282 111415472 -55234824 - B2_Mm2 SINE B2 -8 187 2 4 1435 182 37 37 0 chrX 111415489 111415516 -55234780 + (TTG)n Simple_repeat Simple_repeat 2 29 0 4 1435 333 297 7 86 chrX 111415516 111415667 -55234629 - B1_Mur3 SINE Alu -7 142 4 4 1435 442 311 25 79 chrX 111416282 111416561 -55233735 - RLTR40 LTR ERVK -515 302 39 4 1435 6216 249 110 17 chrX 111416827 111418676 -55231620 - Lx7 LINE L1 -20 7676 5616 4 1435 295 194 75 0 chrX 111418676 111418743 -55231553 - RLTR25A LTR ERVK -1020 83 12 4 1435 261 339 55 0 chrX 111418764 111418873 -55231423 + Lx8 LINE L1 7185 7299 -174 4 1435 31 68 0 0 chrX 111418887 111418946 -55231350 + AT_rich Low_complexity Low_complexity 1 59 0 4 1435 384 73 0 3 chrX 111418957 111419015 -55231281 + L1_Mus2 LINE L1 5580 5636 -247 4 1435 950 116 4 1 chrX 111419016 111419174 -55231122 - B2_Mm2 SINE B2 -31 162 2 4 1435 528 200 0 0 chrX 111419292 111419402 -55230894 + (TATG)n Simple_repeat Simple_repeat 4 113 0 4 1435 22 0 0 0 chrX 111419563 111419585 -55230711 + AT_rich Low_complexity Low_complexity 1 22 0 4 1435 245 348 26 17 chrX 111419695 111419812 -55230484 + MLT1A0 LTR MaLR 13 130 -278 4 1435 1205 206 97 75 chrX 111419829 111420001 -55230295 + Lx5 LINE L1 6713 6867 -183 4 1435 2161 106 3 69 chrX 111420001 111420347 -55229949 + ORR1A2 LTR MaLR 5 327 0 4 1435 1205 206 97 75 chrX 111420347 111420505 -55229791 + Lx5 LINE L1 6868 7050 0 4 1435 510 369 14 33 chrX 111420538 111420751 -55229545 + MLT1A0 LTR MaLR 157 365 0 4 1435 1265 113 11 0 chrX 111422346 111422531 -55227765 - B2_Mm2 SINE B2 -8 187 1 4 1435 555 283 44 39 chrX 111422864 111423070 -55227226 - B3 SINE B2 -7 209 3 4 1435 189 195 0 0 chrX 111423120 111423161 -55227135 + T-rich Low_complexity Low_complexity 4 44 0 4 1435 418 207 207 0 chrX 111423459 111423570 -55226726 - B1_Mur2 SINE Alu -2 147 14 4 1435 576 107 0 0 chrX 111423659 111423762 -55226534 + (CA)n Simple_repeat Simple_repeat 2 104 0 4 1435 374 130 0 0 chrX 111424184 111424253 -55226043 + Lx9 LINE L1 7506 7574 -70 4 1435 318 26 0 0 chrX 111424277 111424315 -55225981 + HAL1-3A_ME LINE L1 1975 2012 -846 4 1435 648 194 0 0 chrX 111424315 111424449 -55225847 + (TA)n Simple_repeat Simple_repeat 1 134 0 5 1435 2998 52 3 3 chrX 111424528 111424912 -55225384 - L1Md_F2 LINE L1 -1 6581 6198 5 1435 432 0 0 0 chrX 111425056 111425104 -55225192 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 5 1435 1112 103 0 0 chrX 111425104 111425259 -55225037 - B2_Mm2 SINE B2 -40 155 1 5 1435 27 62 0 0 chrX 111426146 111426194 -55224102 + AT_rich Low_complexity Low_complexity 1 48 0 5 1435 1163 61 0 0 chrX 111426197 111426344 -55223952 + B1_Mm SINE Alu 1 147 0 5 1435 278 26 26 0 chrX 111426556 111426595 -55223701 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1435 31 58 0 0 chrX 111426994 111427046 -55223250 + AT_rich Low_complexity Low_complexity 1 52 0 5 1435 23 0 0 0 chrX 111428532 111428555 -55221741 + AT_rich Low_complexity Low_complexity 1 23 0 5 1435 692 311 53 21 chrX 111429027 111429270 -55221026 - MTD LTR MaLR 0 419 169 5 1435 3057 46 0 15 chrX 111429588 111429986 -55220310 + L1Md_F2 LINE L1 6191 6582 0 5 1435 238 233 16 16 chrX 111430965 111431026 -55219270 + Charlie7 DNA MER1_type 974 1034 -1578 5 1435 8250 43 3 2 chrX 111431157 111432405 -55217891 - L1Md_F2 LINE L1 0 7000 5363 5 1435 268 346 89 0 chrX 111432811 111432912 -55217384 + B1F SINE Alu 14 123 -26 5 1435 611 285 7 28 chrX 111433128 111433269 -55217027 - B1_Mur1 SINE Alu 0 149 12 5 1435 259 314 14 0 chrX 111433213 111433283 -55217013 - B4A SINE B4 -140 152 82 5 1435 22 35 0 0 chrX 111433315 111433344 -55216952 + AT_rich Low_complexity Low_complexity 1 29 0 5 1435 3359 177 38 10 chrX 111433431 111434117 -55216179 - L1_Mur2 LINE L1 -886 4991 4287 5 1435 10360 8 0 0 chrX 111434114 111435283 -55215013 + L1Md_A LINE L1 4418 5586 -297 5 1435 8731 19 0 0 chrX 111435283 111436279 -55214017 + L1Md_A LINE L1 5587 6582 0 5 1435 527 143 20 0 chrX 111436279 111436377 -55213919 - L1_Mur2 LINE L1 -1574 4303 4204 5 1435 345 24 0 0 chrX 111436415 111436457 -55213839 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1435 1777 185 76 26 chrX 111436534 111436834 -55213462 + RMER6C LTR ERVK 1 375 -315 5 1435 963 95 0 0 chrX 111436834 111436992 -55213304 + (GA)n Simple_repeat Simple_repeat 2 159 0 5 1435 1777 196 167 22 chrX 111436992 111437273 -55213023 + RMER6C LTR ERVK 376 689 -1 5 1435 610 225 42 9 chrX 111437338 111437503 -55212793 - MTD LTR MaLR 0 400 229 5 1435 185 0 40 0 chrX 111437709 111437734 -55212562 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 5 1435 263 258 0 46 chrX 111437808 111437873 -55212423 + Lx8 LINE L1 7268 7329 -144 5 1435 2519 71 3 9 chrX 111438330 111438670 -55211626 - Lx3_Mus LINE L1 0 7009 6672 5 1435 2330 98 3 3 chrX 111438845 111439172 -55211124 + Lx3A LINE L1 6642 6968 -13 5 1435 531 0 0 0 chrX 111439172 111439231 -55211065 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 5 1435 678 117 0 0 chrX 111439295 111439406 -55210890 + (TG)n Simple_repeat Simple_repeat 2 112 0 5 1435 674 304 14 5 chrX 111439723 111439931 -55210365 - B3 SINE B2 -6 210 1 5 1435 265 291 42 68 chrX 111439932 111440050 -55210246 - PB1D10 SINE Alu 0 117 3 5 1435 254 219 78 0 chrX 111440679 111440743 -55209553 - Lx8 LINE L1 -777 6696 6628 5 1435 3648 62 20 6 chrX 111440784 111441273 -55209023 - LTRIS2 LTR ERV1 0 564 69 5 1435 372 214 278 5 chrX 111441273 111441467 -55208829 - RLTR1B-int LTR ERV1 -26 5037 4791 5 1435 9590 138 119 49 chrX 111441559 111444220 -55206076 - RLTR1B-int LTR ERV1 -917 4146 760 5 1435 3959 151 79 21 chrX 111444211 111444921 -55205375 - RMER16-int LTR ERVK -3961 1445 695 5 1435 881 133 68 19 chrX 111444925 111445086 -55205210 - RMER16-int LTR ERVK -5096 310 142 5 1435 1140 117 24 49 chrX 111445431 111445699 -55204597 - RLTR1B-int LTR ERV1 -3006 293 60 5 1435 251 171 75 125 chrX 111445725 111445845 -55204451 - RLTR1B-int LTR ERV1 -3584 114 1 5 1435 3656 62 20 6 chrX 111445845 111446334 -55203962 - LTRIS2 LTR ERV1 0 564 69 5 1435 192 330 25 34 chrX 111446513 111446632 -55203664 - MIR SINE MIR -15 247 130 5 1435 1359 324 68 52 chrX 111446771 111447276 -55203020 - Lx8 LINE L1 -868 6605 6103 5 1435 3996 152 65 97 chrX 111447276 111448212 -55202084 - RMER17A2 LTR ERVK 0 906 1 5 1435 1359 324 68 52 chrX 111448212 111448660 -55201636 - Lx8 LINE L1 -1371 6102 5637 5 1435 1538 156 50 159 chrX 111448660 111449057 -55201239 + ORR1B1 LTR MaLR 41 394 0 5 1435 494 295 30 15 chrX 111449157 111449360 -55200936 - L1M2 LINE L1 -703 5597 5392 5 1435 1421 98 0 5 chrX 111449357 111449563 -55200733 - L1_Mm LINE L1 -743 5140 4936 5 1435 1628 62 17 34 chrX 111449553 111449786 -55200510 + L1_Mus1 LINE L1 6263 6491 -76 5 1435 4134 121 22 15 chrX 111449786 111450478 -55199818 - RLTR13D6 LTR ERVK -266 848 1 5 1435 1756 274 29 29 chrX 111450478 111451195 -55199101 - Lx8 LINE L1 -1000 4880 4164 5 1435 31 58 0 0 chrX 111452327 111452379 -55197917 + AT_rich Low_complexity Low_complexity 1 52 0 5 1435 753 148 0 0 chrX 111452491 111452619 -55197677 + (A)n Simple_repeat Simple_repeat 1 128 0 5 1435 29903 101 3 15 chrX 111453607 111454429 -55195867 - L1_Mus1 LINE L1 -1 6566 5752 5 1435 2400 133 126 5 chrX 111454429 111454859 -55195437 - RLTR45 LTR ERVK 0 482 1 5 1435 29903 107 15 20 chrX 111454859 111458557 -55191739 - L1_Mus1 LINE L1 -132 5751 2087 5 1435 209 33 33 0 chrX 111458557 111458587 -55191709 + (TTG)n Simple_repeat Simple_repeat 2 32 0 5 1435 29903 92 10 13 chrX 111458587 111459687 -55190609 - L1_Mus1 LINE L1 -3797 2086 970 5 1435 512 270 78 43 chrX 111459676 111459908 -55190388 - Lx7 LINE L1 -1833 5863 5624 5 1435 233 360 72 57 chrX 111459934 111460267 -55190029 - LTR40c LTR ERVL -2 463 126 5 1435 3432 66 2 13 chrX 111460281 111460744 -55189552 + L1Md_F2 LINE L1 6113 6570 -12 5 1435 783 43 0 0 chrX 111460969 111461063 -55189233 + L1Md_F3 LINE L1 5493 5586 -297 5 1435 8072 40 8 4 chrX 111461064 111462057 -55188239 + L1Md_F3 LINE L1 5588 6584 0 5 1435 1330 191 169 6 chrX 111462314 111462441 -55187855 - Lx9 LINE L1 -3 7641 7483 5 1435 312 70 0 0 chrX 111462441 111462484 -55187812 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1435 1330 191 169 6 chrX 111462484 111462704 -55187592 - Lx9 LINE L1 -162 7482 7238 5 1435 31 76 0 0 chrX 111462737 111462803 -55187493 + AT_rich Low_complexity Low_complexity 1 66 0 5 1435 3960 201 59 15 chrX 111463184 111464054 -55186242 - RMER13B LTR ERVK 0 908 1 5 1435 1488 193 12 78 chrX 111464082 111464555 -55185741 + RMER17C LTR ERVK 16 440 -518 5 1435 22 56 0 0 chrX 111464578 111464614 -55185682 + AT_rich Low_complexity Low_complexity 1 36 0 5 1435 399 98 0 0 chrX 111465041 111465177 -55185119 + L1_Mus1 LINE L1 6504 6567 0 5 1435 632 328 15 49 chrX 111465240 111465445 -55184851 - B3A SINE B2 0 198 1 5 1435 393 22 0 0 chrX 111465488 111465534 -55184762 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 5 1435 1005 116 0 0 chrX 111465534 111465672 -55184624 - B1_Mus1 SINE Alu -10 138 1 5 1435 5257 160 5 9 chrX 111465672 111466594 -55183702 - L1_Mm LINE L1 -770 5113 4195 5 1435 2786 90 25 5 chrX 111466594 111466650 -55183646 + L1_Mus4 LINE L1 6220 6275 -361 5 1435 243 0 0 0 chrX 111466650 111466677 -55183619 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1435 2786 90 25 5 chrX 111466677 111467021 -55183275 + L1_Mus4 LINE L1 6276 6628 -8 5 1435 21 36 0 0 chrX 111467090 111467118 -55183178 + AT_rich Low_complexity Low_complexity 1 28 0 5 1435 217 103 51 0 chrX 111468887 111468926 -55181370 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 5 1435 222 433 7 7 chrX 111468926 111469061 -55181235 - B1F SINE Alu -12 137 3 5 1435 372 125 0 0 chrX 111469172 111469236 -55181060 + (TATG)n Simple_repeat Simple_repeat 3 66 0 5 1435 405 309 49 62 chrX 111469240 111469402 -55180894 - RSINE1 SINE B4 -2 163 4 5 1435 883 289 58 35 chrX 111469513 111469763 -55180533 - Lx6 LINE L1 -30 7430 7171 5 1435 1656 168 8 161 chrX 111469763 111469962 -55180334 - RMER17C LTR ERVK 0 410 215 5 1435 399 21 0 0 chrX 111469962 111470010 -55180286 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1435 1656 168 8 161 chrX 111470010 111470294 -55180002 - RMER17C LTR ERVK -196 214 1 5 1435 883 289 58 35 chrX 111470294 111470355 -55179941 - Lx6 LINE L1 -290 7170 7112 5 1435 2717 204 35 19 chrX 111470353 111470711 -55179585 + L1_Mur3 LINE L1 5064 5436 -444 5 1435 3037 57 31 0 chrX 111470711 111471094 -55179202 + MTA_Mm LTR MaLR 1 395 -1 5 1435 2717 204 35 19 chrX 111471094 111471359 -55178937 + L1_Mur3 LINE L1 5437 5697 -183 5 1435 230 178 192 0 chrX 111471398 111471471 -55178825 + Lx8 LINE L1 7383 7469 -4 5 1435 779 286 33 36 chrX 111471885 111472244 -55178052 - L1MD LINE L1 -638 5721 5364 5 1435 1695 184 196 55 chrX 111472316 111473080 -55177216 + RMER6C LTR ERVK 1 720 0 5 1435 490 288 116 24 chrX 111473081 111473458 -55176838 - L1MA5 LINE L1 -56 6244 5820 5 1435 192 135 0 0 chrX 111473481 111473518 -55176778 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 1435 1344 230 45 21 chrX 111474031 111474524 -55175772 - Lx6 LINE L1 -145 7315 6455 5 1435 249 372 7 0 chrX 111474673 111474821 -55175475 - B1F SINE Alu 0 149 1 5 1435 1072 332 53 43 chrX 111474927 111475626 -55174670 - Lx9 LINE L1 -93 7551 6846 5 1435 249 310 8 15 chrX 111476002 111476133 -55174163 - L1M4b LINE L1 -4925 2409 2280 5 1435 25 0 0 0 chrX 111477070 111477095 -55173201 + AT_rich Low_complexity Low_complexity 1 25 0 5 1435 2033 154 3 0 chrX 111477095 111477425 -55172871 - Lx3A LINE L1 -11 6970 6640 5 1435 29002 110 15 10 chrX 111477425 111477644 -55172652 - L1_Mur1 LINE L1 -102 5784 5567 5 1435 1529 16 0 0 chrX 111477644 111477826 -55172470 - L1Md_A LINE L1 0 6582 6401 5 1435 29002 110 15 10 chrX 111477826 111482094 -55168202 - L1_Mur1 LINE L1 -320 5566 1271 5 1435 207 0 0 0 chrX 111482094 111482117 -55168179 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5 1435 29002 114 24 6 chrX 111482117 111482500 -55167796 - L1_Mur1 LINE L1 -5714 1270 884 5 1435 352 338 62 39 chrX 111482718 111483075 -55167221 - MLT1A0 LTR MaLR 0 365 1 5 1435 417 321 36 0 chrX 111483410 111483522 -55166774 + B3A SINE B2 1 116 -82 5 1435 240 35 0 0 chrX 111483541 111483570 -55166726 + (TC)n Simple_repeat Simple_repeat 1 29 0 5 1435 288 0 0 0 chrX 111483570 111483601 -55166695 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1435 360 0 0 0 chrX 111484123 111484163 -55166133 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1435 261 0 0 0 chrX 111484163 111484191 -55166105 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 1435 21 0 0 0 chrX 111484355 111484376 -55165920 + AT_rich Low_complexity Low_complexity 1 21 0 5 1435 22 0 0 0 chrX 111484507 111484529 -55165767 + AT_rich Low_complexity Low_complexity 1 22 0 5 1435 210 338 69 14 chrX 111485010 111485082 -55165214 + B1F1 SINE Alu 12 87 -62 5 1435 3919 217 13 41 chrX 111485149 111486134 -55164162 - RMER17B LTR ERVK 0 958 1 5 1435 26 0 0 0 chrX 111486264 111486290 -55164006 + AT_rich Low_complexity Low_complexity 1 26 0 5 1435 412 243 129 59 chrX 111486641 111486824 -55163472 - ORR1D2 LTR MaLR 0 370 168 5 1435 448 156 25 0 chrX 111486828 111486950 -55163346 + (CAGAGA)n Simple_repeat Simple_repeat 2 126 0 6 1435 872 277 25 15 chrX 111486952 111487211 -55163085 - ORR1E LTR MaLR -121 273 5 6 1435 523 234 57 23 chrX 111487213 111487388 -55162908 - L1MA9 LINE L1 -346 5966 5786 6 1435 660 304 48 38 chrX 111487431 111487732 -55162564 + L1M3 LINE L1 4752 5051 -1089 6 1435 2032 132 3 77 chrX 111487732 111488085 -55162211 + ORR1A2 LTR MaLR 1 327 0 6 1435 660 272 118 29 chrX 111488085 111488477 -55161819 + L1M3 LINE L1 5052 5482 -830 6 1435 409 274 88 7 chrX 111488642 111488820 -55161476 + L1M3 LINE L1 5458 5683 -617 6 1435 2976 36 0 0 chrX 111488962 111489320 -55160976 + L1Md_T LINE L1 6224 6581 -1 6 1435 2291 216 114 12 chrX 111489354 111489925 -55160371 + Lx7 LINE L1 6806 7434 -262 6 1435 661 324 62 14 chrX 111491054 111491330 -55158966 + B4A SINE B4 2 290 -2 6 1435 201 94 0 0 chrX 111491350 111491382 -55158914 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1435 22 35 0 0 chrX 111491713 111491742 -55158554 + AT_rich Low_complexity Low_complexity 1 29 0 6 1435 2012 158 44 97 chrX 111492380 111492835 -55157461 + RMER6D LTR ERVK 1 431 -289 6 1435 720 247 7 7 chrX 111492845 111493000 -55157296 - RMER13A LTR ERVK 0 860 706 6 1435 2587 136 47 9 chrX 111493072 111493495 -55156801 - Lx4A LINE L1 -121 6937 6499 6 1435 438 180 90 0 chrX 111493491 111493580 -55156716 - L1_Mur2 LINE L1 -6447 265 169 6 1435 233 257 84 49 chrX 111493593 111493736 -55156560 - L1MA9 LINE L1 -371 5941 5794 6 1435 879 309 121 23 chrX 111493953 111494258 -55156038 - ORR1D2 LTR MaLR 0 370 36 6 1435 48 67 0 0 chrX 111496406 111496496 -55153800 + AT_rich Low_complexity Low_complexity 1 90 0 6 1435 369 0 0 0 chrX 111497084 111497125 -55153171 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 1435 207 0 0 0 chrX 111497401 111497424 -55152872 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1435 1452 91 0 0 chrX 111497424 111497623 -55152673 - L1_Mm LINE L1 -683 5200 5002 6 1435 4575 101 8 1 chrX 111497623 111498277 -55152019 + L1_Mus3 LINE L1 5974 6631 -7 6 1435 27 62 0 0 chrX 111498292 111498340 -55151956 + AT_rich Low_complexity Low_complexity 1 48 0 6 1435 185 372 13 13 chrX 111498403 111498482 -55151814 - L2a LINE L2 0 3426 3348 6 1435 1456 273 231 18 chrX 111498638 111499193 -55151103 + Lx6 LINE L1 6761 7433 -27 6 1435 862 204 118 29 chrX 111499725 111499997 -55150299 + L1_Mur3 LINE L1 5113 5408 -472 6 1435 233 247 81 12 chrX 111500003 111500089 -55150207 + Lx7 LINE L1 6166 6257 -1439 1 1435 2034 282 34 13 chrX 111500059 111500884 -55149412 + Lx7 LINE L1 5505 6351 -1345 1 1435 1736 128 41 10 chrX 111500902 111501194 -55149102 + ORR1A4 LTR MaLR 29 329 0 2 1435 9138 174 35 67 chrX 111501194 111503217 -55147079 + ORR1A4-int LTR MaLR 1 1959 -4 2 1435 1176 154 11 88 chrX 111503221 111503484 -55146812 + ORR1A4 LTR MaLR 1 243 -86 2 1435 8125 15 0 0 chrX 111503484 111504393 -55145903 + MERVL-int LTR ERVL 2191 3099 -2386 3 1435 386 71 18 0 chrX 111504398 111504454 -55145842 + ORR1A4 LTR MaLR 228 284 -45 2 1435 995 284 36 27 chrX 111504456 111504708 -55145588 - Lx7 LINE L1 -746 6950 6695 4 1435 637 58 0 0 chrX 111504708 111504795 -55145501 + L1_Mus1 LINE L1 6481 6567 0 5 1435 995 284 36 27 chrX 111504795 111504872 -55145424 - Lx7 LINE L1 -1002 6694 6619 4 1435 375 147 0 36 chrX 111504877 111504960 -55145336 - ORR1B2 LTR MaLR 0 367 272 6 1435 850 277 40 8 chrX 111504960 111505211 -55145085 + Lx7 LINE L1 6749 7007 -689 1 1435 428 123 0 14 chrX 111505291 111505365 -55144931 + (TAA)n Simple_repeat Simple_repeat 2 74 0 7 1435 388 253 31 9 chrX 111505667 111505806 -55144490 - MYSERV6-int LTR ERVK -7837 1122 1025 8 1435 895 214 88 49 chrX 111505981 111506310 -55143986 - RLTR15 LTR ERVK -17 342 1 9 1435 266 342 40 7 chrX 111506402 111506552 -55143744 - L1M3 LINE L1 -1424 4719 4565 1 1435 37 81 0 0 chrX 111506709 111506795 -55143501 + AT_rich Low_complexity Low_complexity 1 86 0 1 1435 285 259 80 44 chrX 111506795 111507045 -55143251 - L1M3 LINE L1 -1631 4509 4251 1 1435 33807 91 7 5 chrX 111507283 111513426 -55136870 - L1Md_F2 LINE L1 -12 6570 418 1 1435 978 26 0 0 chrX 111513502 111513619 -55136677 + (TC)n Simple_repeat Simple_repeat 1 117 0 1 1435 23 33 0 0 chrX 111513625 111513655 -55136641 + AT_rich Low_complexity Low_complexity 1 30 0 1 1435 279 311 76 19 chrX 111513661 111513766 -55136530 + B1F1 SINE Alu 35 145 -4 1 1435 605 165 91 0 chrX 111513849 111513970 -55136326 + Lx2 LINE L1 6862 6993 -4 1 1435 1280 294 93 0 chrX 111513992 111514359 -55135937 - MTD LTR MaLR 0 419 19 1 1435 2930 154 77 0 chrX 111515288 111515806 -55134490 - Lx4A LINE L1 -2 7056 6499 1 1435 298 215 0 60 chrX 111515806 111515890 -55134406 - L1_Mur2 LINE L1 -6451 261 183 1 1435 255 248 73 16 chrX 111516374 111516497 -55133799 + LTR37A LTR ERV1 254 383 -43 2 1435 1637 241 35 62 chrX 111516700 111517248 -55133048 + RLTR31_Mur LTR ERVK 17 549 -4 2 1435 2142 87 7 0 chrX 111517640 111517929 -55132367 + L1_Mus1 LINE L1 6274 6564 -3 2 1435 7428 146 81 71 chrX 111518391 111520489 -55129807 - L1Md_F2 LINE L1 -2 7048 4976 2 1435 5037 128 29 21 chrX 111520489 111521310 -55128986 + Lx LINE L1 5825 6652 -2 2 1435 480 137 11 0 chrX 111521319 111521414 -55128882 - L1_Mur2 LINE L1 -562 5315 5220 2 1435 6215 170 28 35 chrX 111521412 111521485 -55128811 - L1_Mur2 LINE L1 -2111 3766 3704 2 1435 324 0 0 0 chrX 111521485 111521521 -55128775 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2 1435 6215 170 28 35 chrX 111521521 111521762 -55128534 - L1_Mur2 LINE L1 -2174 3703 3484 2 1435 465 254 51 22 chrX 111521762 111521899 -55128397 - B1_Mur4 SINE Alu -5 145 5 2 1435 6215 170 28 35 chrX 111521899 111522918 -55127378 - L1_Mur2 LINE L1 -2394 3483 2441 2 1435 21 82 0 0 chrX 111523075 111523124 -55127172 + AT_rich Low_complexity Low_complexity 1 49 0 2 1435 903 340 57 84 chrX 111523229 111524097 -55126199 - Lx8 LINE L1 0 7473 6630 2 1435 7774 75 10 18 chrX 111524098 111525202 -55125094 + L1Md_Gf LINE L1 94 1287 -5373 3 1435 2630 91 7 64 chrX 111525202 111525638 -55124658 + IAPLTR2a LTR ERVK 1 411 0 3 1435 305 217 9 36 chrX 111525638 111525665 -55124631 + L1_Mur2 LINE L1 1285 1309 -4568 3 1435 1130 69 10 113 chrX 111525665 111525860 -55124436 + IAPEz-int LTR ERVK 19 193 -6288 3 1435 228 327 0 0 chrX 111525860 111525915 -55124381 + RLTR27 LTR ERVK 221 275 -34 3 1435 3813 57 6 18 chrX 111525915 111526416 -55123880 + IAPEz-int LTR ERVK 168 662 -5819 3 1435 442 66 0 32 chrX 111526416 111526479 -55123817 + IAPEz-int LTR ERVK 1359 1419 -5062 3 1435 1908 92 8 4 chrX 111526468 111526729 -55123567 + IAPEz-int LTR ERVK 2236 2497 -5183 3 1435 932 73 24 0 chrX 111526726 111526849 -55123447 + IAPEz-int LTR ERVK 4785 4910 -2770 3 1435 26281 13 2 0 chrX 111526849 111529788 -55120508 + IAPEz-int LTR ERVK 3525 6470 -11 3 1435 494 78 0 13 chrX 111529788 111529799 -55120497 + L1VL1 LINE L1 1052 1062 -5360 3 1435 2685 87 19 40 chrX 111529799 111530219 -55120077 + IAPLTR2a LTR ERVK 1 411 0 3 1435 34195 44 0 16 chrX 111530219 111534595 -55115701 + L1Md_T LINE L1 1279 5586 -297 3 1435 8487 31 0 0 chrX 111534595 111535591 -55114705 + L1Md_T LINE L1 5587 6582 0 3 1435 255 61 0 0 chrX 111535596 111535629 -55114667 + (A)n Simple_repeat Simple_repeat 1 33 0 3 1435 490 311 53 43 chrX 111535636 111535868 -55114428 + MTC-int LTR MaLR 420 610 -648 3 1435 397 289 34 87 chrX 111535876 111536080 -55114216 - L1_Mur3 LINE L1 -2375 3505 3313 3 1435 381 93 0 0 chrX 111536080 111536134 -55114162 + (CAGA)n Simple_repeat Simple_repeat 3 56 0 4 1435 397 289 34 87 chrX 111536134 111536194 -55114102 - L1_Mur3 LINE L1 -2568 3312 3255 3 1435 446 267 0 112 chrX 111536209 111536361 -55113935 + B1_Mus1 SINE Alu 1 135 -13 4 1435 195 42 0 0 chrX 111536361 111536385 -55113911 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 4 1435 907 301 20 24 chrX 111536416 111536712 -55113584 + Lx6 LINE L1 7140 7434 -26 4 1435 1488 296 72 41 chrX 111536742 111537721 -55112575 - L1_Mur3 LINE L1 -2665 3215 2206 3 1435 1280 238 36 64 chrX 111537718 111538109 -55112187 + Lx2B LINE L1 6598 6977 -23 4 1435 213 193 17 17 chrX 111539317 111539375 -55110921 + (TTATA)n Simple_repeat Simple_repeat 5 62 0 4 1435 228 242 0 43 chrX 111539982 111540051 -55110245 + B1F SINE Alu 83 148 -1 4 1435 1821 53 9 0 chrX 111540077 111540302 -55109994 - L1_Mus1 LINE L1 -235 6332 6106 4 1435 1567 83 14 0 chrX 111540302 111540518 -55109778 + L1_Mus1 LINE L1 6349 6567 0 4 1435 481 99 12 12 chrX 111540549 111540631 -55109665 + (GAAAA)n Simple_repeat Simple_repeat 4 85 0 4 179 29002 148 34 23 chrX 111540702 111542903 -55107393 + L1_Mus1 LINE L1 177 2456 -3427 4 1436 4376 71 0 0 chrX 111542903 111543467 -55106829 + L1Md_F2 LINE L1 6005 6568 -14 5 1436 29002 104 14 20 chrX 111543467 111547662 -55102634 + L1_Mus1 LINE L1 2457 6652 -2 4 1436 441 36 0 0 chrX 111549501 111549556 -55100740 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1436 2468 120 5 0 chrX 111550816 111551190 -55099106 - L1_Mus3 LINE L1 -6 6632 6257 5 1436 2517 83 74 0 chrX 111551190 111551553 -55098743 + L1_Mus3 LINE L1 5891 6280 -358 5 1436 31 26 0 0 chrX 111552128 111552166 -55098130 + AT_rich Low_complexity Low_complexity 1 38 0 5 1436 239 347 109 11 chrX 111553099 111553274 -55097022 + L2a LINE L2 3220 3411 -15 5 1436 225 0 0 0 chrX 111553500 111553525 -55096771 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 5 1436 21 57 0 0 chrX 111554045 111554080 -55096216 + AT_rich Low_complexity Low_complexity 1 35 0 5 1436 4624 68 30 6 chrX 111554540 111555163 -55095133 - L1_Mus2 LINE L1 -1 6565 5928 5 1436 731 53 0 0 chrX 111555163 111555258 -55095038 + L1_Mus2 LINE L1 5855 5949 -617 5 1436 1060 95 0 26 chrX 111555596 111555733 -55094563 + B1_Mus2 SINE Alu 1 137 -10 5 1436 211 28 56 0 chrX 111555733 111555769 -55094527 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 5 1436 1060 95 0 26 chrX 111555769 111555782 -55094514 + B1_Mus2 SINE Alu 138 147 0 5 1436 180 289 0 146 chrX 111556345 111556503 -55093793 - L2 LINE L2 -1886 1533 1399 6 1436 24 0 0 0 chrX 111557188 111557212 -55093084 + AT_rich Low_complexity Low_complexity 1 24 0 6 1436 405 0 0 0 chrX 111557474 111557519 -55092777 + (TATAA)n Simple_repeat Simple_repeat 5 49 0 6 1436 41 72 0 0 chrX 111557560 111557643 -55092653 + AT_rich Low_complexity Low_complexity 1 83 0 6 1436 1064 153 60 0 chrX 111557781 111557941 -55092355 + B2_Mm2 SINE B2 1 161 -34 6 1436 522 70 0 0 chrX 111557941 111558012 -55092284 + (TAAA)n Simple_repeat Simple_repeat 1 71 0 6 1436 1064 153 60 0 chrX 111558012 111558034 -55092262 + B2_Mm2 SINE B2 162 193 -2 6 1436 22 0 0 0 chrX 111559358 111559380 -55090916 + AT_rich Low_complexity Low_complexity 1 22 0 6 1436 631 221 90 7 chrX 111559560 111559715 -55090581 + MTD LTR MaLR 244 411 -8 6 1436 2552 319 43 10 chrX 111559719 111560719 -55089577 - Lx8 LINE L1 -188 7285 6253 6 1436 25 51 0 0 chrX 111560777 111560816 -55089480 + AT_rich Low_complexity Low_complexity 1 39 0 6 1436 588 84 0 0 chrX 111560994 111561077 -55089219 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 7 1436 522 283 72 14 chrX 111561166 111561426 -55088870 + Lx7 LINE L1 5624 5929 -368 7 1436 2909 159 2 6 chrX 111561428 111561922 -55088374 - Lx2B LINE L1 -5 6995 6504 7 1436 487 330 122 16 chrX 111563899 111564087 -55086209 - B4 SINE B4 -74 218 11 7 1436 1118 82 0 0 chrX 111564133 111564279 -55086017 + B1_Mm SINE Alu 2 147 0 7 1436 22 56 0 0 chrX 111564572 111564608 -55085688 + AT_rich Low_complexity Low_complexity 1 36 0 7 1436 1300 89 10 5 chrX 111566437 111566641 -55083655 - L1_Mus3 LINE L1 -6 6632 6428 7 1436 2155 79 0 0 chrX 111566641 111566918 -55083378 + L1_Mus3 LINE L1 6150 6426 -212 7 1436 308 24 24 0 chrX 111567303 111567344 -55082952 + (TTTTTG)n Simple_repeat Simple_repeat 4 45 0 7 1436 819 73 0 0 chrX 111567346 111567456 -55082840 - B1_Mus2 SINE Alu -1 146 37 7 1436 262 0 26 26 chrX 111568232 111568271 -55082025 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 7 1436 1081 65 0 0 chrX 111568271 111568409 -55081887 - B1_Mus1 SINE Alu -9 139 2 8 1436 1619 191 10 3 chrX 111568930 111569235 -55081061 - MERVL_2A-int LTR ERVL -3968 1793 1487 8 1436 527 254 0 0 chrX 111569243 111569353 -55080943 - B3A SINE B2 -88 110 1 8 1436 24 67 0 0 chrX 111569597 111569642 -55080654 + AT_rich Low_complexity Low_complexity 1 45 0 8 1436 876 314 26 28 chrX 111570555 111571057 -55079239 - L1MD1 LINE L1 -278 5964 5464 8 1436 252 326 7 69 chrX 111571068 111571213 -55079083 - MLT1A1 LTR MaLR 0 408 273 8 1436 6640 174 34 36 chrX 111571322 111572936 -55077360 - Lx3C LINE L1 -2 6974 5389 8 1436 412 219 196 38 chrX 111572936 111573064 -55077232 + MT2A LTR ERVL 291 439 -94 8 1436 3277 186 123 98 chrX 111573064 111573944 -55076352 - RMER19B LTR ERVK 0 902 1 8 1436 553 286 28 42 chrX 111573978 111574193 -55076103 - Lx7 LINE L1 -1409 6287 6076 8 1436 23 0 0 0 chrX 111574213 111574236 -55076060 + AT_rich Low_complexity Low_complexity 1 23 0 9 1436 28 86 0 0 chrX 111574271 111574341 -55075955 + AT_rich Low_complexity Low_complexity 1 70 0 9 1436 999 174 11 5 chrX 111574352 111574537 -55075759 - B2_Mm2 SINE B2 -8 187 2 9 1436 629 323 10 0 chrX 111574568 111574766 -55075530 + B3 SINE B2 3 202 -14 9 1436 740 286 0 20 chrX 111574779 111574982 -55075314 - Lx6 LINE L1 -26 7434 7236 9 1436 292 88 17 17 chrX 111575036 111575094 -55075202 + (TA)n Simple_repeat Simple_repeat 2 59 0 9 1436 1062 223 100 28 chrX 111575361 111575422 -55074874 + Lx9 LINE L1 7011 7081 -563 9 1436 2817 101 7 5 chrX 111575422 111575842 -55074454 - BGLII LTR ERVK 0 421 1 9 1436 1128 219 120 10 chrX 111575842 111576325 -55073971 + Lx9 LINE L1 7082 7635 -9 9 1436 286 186 40 30 chrX 111576394 111576494 -55073802 + (TA)n Simple_repeat Simple_repeat 1 101 0 9 1436 35 24 0 0 chrX 111576587 111576629 -55073667 + AT_rich Low_complexity Low_complexity 1 42 0 9 1436 519 31 0 0 chrX 111577170 111577235 -55073061 + (CCCTAA)n Simple_repeat Simple_repeat 6 70 0 1 1436 369 118 29 0 chrX 111577290 111577358 -55072938 - RLTR1B-int LTR ERV1 -2187 1511 1442 1 1436 580 103 28 9 chrX 111577373 111577481 -55072815 - RLTR1B-int LTR ERV1 -2170 1129 1020 1 1436 4411 124 8 39 chrX 111577649 111578411 -55071885 - MMVL30-int LTR ERV1 -2245 1453 716 1 1436 234 105 0 0 chrX 111578770 111578808 -55071488 + (CAGA)n Simple_repeat Simple_repeat 2 39 0 1 1436 422 74 196 69 chrX 111578840 111578942 -55071354 - MMVL30-int LTR ERV1 -2919 380 266 1 1436 1294 194 6 49 chrX 111578926 111579369 -55070927 - MMVL30-int LTR ERV1 -7159 397 1 1 1436 2723 129 12 125 chrX 111579370 111579937 -55070359 - RLTR1C LTR ERV1 0 503 1 1 1436 4322 136 40 40 chrX 111579937 111581517 -55068779 - L1Md_F LINE L1 -4064 1819 283 1 1436 192 77 0 0 chrX 111582648 111582674 -55067622 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 1 1436 1614 250 66 57 chrX 111582675 111583129 -55067167 - Lx5 LINE L1 -15 7035 6578 1 1436 864 311 47 71 chrX 111583184 111583849 -55066447 - L1MA7 LINE L1 -171 6120 5472 1 1436 433 339 6 11 chrX 111583990 111584172 -55066124 - Lx9 LINE L1 -237 7407 7227 1 1436 427 247 0 0 chrX 111584183 111584272 -55066024 - Lx9 LINE L1 -465 7179 7091 1 1436 318 67 0 0 chrX 111584964 111585009 -55065287 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1436 446 303 66 69 chrX 111585343 111585755 -55064541 - MLT2B4 LTR ERVL -5 551 1 1 1436 303 321 110 0 chrX 111585891 111586000 -55064296 - MIR3 SINE MIR -38 170 50 1 1436 5391 60 54 4 chrX 111586156 111586879 -55063417 + L1Md_F2 LINE L1 5824 6582 0 1 1436 245 155 17 0 chrX 111587205 111587263 -55063033 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 1436 21 0 0 0 chrX 111588726 111588747 -55061549 + AT_rich Low_complexity Low_complexity 1 21 0 1 1436 24 0 0 0 chrX 111590580 111590604 -55059692 + AT_rich Low_complexity Low_complexity 1 24 0 1 1436 234 156 0 0 chrX 111593387 111593432 -55056864 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1436 396 40 0 0 chrX 111593435 111593485 -55056811 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 1436 21 0 0 0 chrX 111594600 111594621 -55055675 + AT_rich Low_complexity Low_complexity 1 21 0 1 1436 288 0 0 0 chrX 111594883 111594915 -55055381 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 1436 262 302 81 0 chrX 111595142 111595228 -55055068 - MER99 DNA hAT? -736 95 3 1 1436 716 119 0 0 chrX 111595399 111595517 -55054779 - Lx LINE L1 0 6654 6537 1 1436 3951 238 44 57 chrX 111597390 111597896 -55052400 - Lx7 LINE L1 -5 7691 7212 1 1436 757 214 6 0 chrX 111597896 111598055 -55052241 + Lx7 LINE L1 7532 7691 -5 1 1436 3951 238 44 57 chrX 111598055 111598644 -55051652 - Lx7 LINE L1 -485 7211 6612 1 1436 27 0 0 0 chrX 111599059 111599086 -55051210 + AT_rich Low_complexity Low_complexity 1 27 0 1 1436 271 286 96 36 chrX 111599112 111599279 -55051017 - Lx7 LINE L1 -15 7681 7505 1 1436 3099 295 113 42 chrX 111599291 111600900 -55049396 - Lx7 LINE L1 -386 7310 5587 1 1436 622 239 8 17 chrX 111601245 111601364 -55048932 - B1_Mur2 SINE Alu -31 118 1 1 1436 25 31 0 0 chrX 111601369 111601401 -55048895 + AT_rich Low_complexity Low_complexity 1 32 0 1 1436 27 0 0 0 chrX 111603005 111603032 -55047264 + AT_rich Low_complexity Low_complexity 1 27 0 1 1436 348 385 24 33 chrX 111603360 111603602 -55046694 + MIR SINE MIR 13 254 -8 1 1436 21 0 0 0 chrX 111605775 111605796 -55044500 + AT_rich Low_complexity Low_complexity 1 21 0 1 1436 814 304 66 11 chrX 111606985 111607427 -55042869 - L1MB1 LINE L1 -1 6167 5702 1 1436 343 285 49 31 chrX 111607433 111607626 -55042670 + MTEb LTR MaLR 4 199 -180 1 1436 471 290 99 12 chrX 111607626 111607797 -55042499 - Lx8 LINE L1 -233 7240 7055 1 1436 815 299 30 30 chrX 111607830 111608092 -55042204 + MTEb LTR MaLR 110 371 -8 1 1436 501 309 136 57 chrX 111608461 111608777 -55041519 - Lx8 LINE L1 -4 7469 7129 1 1436 1567 306 70 22 chrX 111608776 111609347 -55040949 - Lx8 LINE L1 -615 6858 6257 1 1436 198 0 0 0 chrX 111609347 111609369 -55040927 + (TTTG)n Simple_repeat Simple_repeat 4 25 0 1 1436 1567 306 70 22 chrX 111609369 111609429 -55040867 - Lx8 LINE L1 -1217 6256 6197 1 1436 236 172 17 0 chrX 111609429 111609487 -55040809 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 1436 1602 213 29 32 chrX 111609935 111610280 -55040016 - ORR1B2 LTR MaLR -8 359 16 1 1436 2206 92 21 3 chrX 111610282 111610655 -55039641 - L1_Mus3 LINE L1 0 6638 6304 1 1436 295 68 0 0 chrX 111610739 111610783 -55039513 - Lx LINE L1 -8 6646 6603 1 1436 4344 14 2 0 chrX 111610783 111611275 -55039021 - MT2_Mm LTR ERVL 0 493 1 1 1436 314 0 0 0 chrX 111611275 111611313 -55038983 - MERVL-int LTR ERVL 0 5485 5448 1 1436 393 167 46 35 chrX 111611313 111611400 -55038896 - ORR1B2-int LTR MaLR -1323 640 553 1 1436 40544 15 14 0 chrX 111611400 111616687 -55033609 - MERVL-int LTR ERVL -125 5360 1 1 1436 4371 14 2 0 chrX 111616687 111617179 -55033117 - MT2_Mm LTR ERVL 0 493 1 1 1436 6793 126 16 2 chrX 111617179 111618319 -55031977 - Lx LINE L1 -47 6607 5451 1 1436 28 0 0 0 chrX 111618569 111618597 -55031699 + AT_rich Low_complexity Low_complexity 1 28 0 1 1436 33039 109 20 18 chrX 111619837 111626046 -55024250 - L1Md_F2 LINE L1 -11 6571 341 1 1436 1167 55 6 6 chrX 111626046 111626212 -55024084 + L1Md_A LINE L1 6417 6582 0 1 1436 2145 232 136 71 chrX 111626212 111626309 -55023987 - L1Md_F2 LINE L1 -6298 340 240 1 1436 1547 281 81 26 chrX 111626688 111627453 -55022843 - Lx6 LINE L1 -39 7421 6615 1 1436 236 331 53 11 chrX 111627499 111627688 -55022608 - L1M4 LINE L1 -2279 3867 3671 1 1436 229 211 0 0 chrX 111627689 111627741 -55022555 + T-rich Low_complexity Low_complexity 1 52 0 1 1436 3705 134 26 5 chrX 111627745 111628361 -55021935 - Lx3B LINE L1 -3 6970 6342 1 1436 618 14 0 0 chrX 111628593 111628664 -55021632 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 1436 6548 116 60 5 chrX 111629314 111630451 -55019845 - L1_Mus3 LINE L1 -4 6634 5365 1 1436 4357 110 9 11 chrX 111630464 111631128 -55019168 - L1_Mus3 LINE L1 -984 4899 4237 1 1436 803 91 38 0 chrX 111631158 111631290 -55019006 - L1_Mus2 LINE L1 -2 6564 6428 1 1436 502 314 34 14 chrX 111631543 111631791 -55018505 - Lx7 LINE L1 -1881 5815 5593 1 1436 261 197 0 0 chrX 111631803 111631864 -55018432 + (TTA)n Simple_repeat Simple_repeat 2 62 0 1 1436 427 323 59 44 chrX 111631899 111632103 -55018193 - Lx8 LINE L1 -759 6714 6508 1 1436 545 274 124 88 chrX 111632108 111632779 -55017517 - L1_Rod LINE L1 -330 5517 4823 1 1436 334 324 129 25 chrX 111632881 111632896 -55017400 - Lx7 LINE L1 -6896 832 818 1 1436 1182 129 0 10 chrX 111632896 111633100 -55017196 + Lx LINE L1 6436 6637 -17 1 1436 732 61 0 0 chrX 111633108 111633206 -55017090 + (GA)n Simple_repeat Simple_repeat 2 99 0 1 1436 687 25 0 0 chrX 111633206 111633286 -55017010 + (GGAA)n Simple_repeat Simple_repeat 1 81 0 1 1436 334 324 129 25 chrX 111633286 111633539 -55016757 - Lx7 LINE L1 -6922 806 527 1 1436 309 323 38 8 chrX 111633519 111633650 -55016646 - Lx7 LINE L1 -6898 830 696 1 1436 183 80 0 0 chrX 111634548 111634573 -55015723 + (TAA)n Simple_repeat Simple_repeat 3 27 0 1 1436 248 284 0 0 chrX 111634599 111634687 -55015609 + T-rich Low_complexity Low_complexity 1 88 0 1 1436 237 119 0 0 chrX 111634687 111634729 -55015567 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 1436 25 83 0 0 chrX 111634783 111634843 -55015453 + AT_rich Low_complexity Low_complexity 1 60 0 1 1436 488 265 15 22 chrX 111635641 111635776 -55014520 - B1_Mur1 SINE Alu -4 145 12 1 1436 272 246 23 106 chrX 111635671 111635803 -55014493 - MT2B LTR ERVL -331 270 150 1 1436 339 303 26 60 chrX 111636331 111636447 -55013849 - B3A SINE B2 0 198 87 1 1436 256 327 55 31 chrX 111636500 111636756 -55013540 + L1M2 LINE L1 2782 3043 -3100 1 1436 427 37 0 0 chrX 111636753 111636807 -55013489 - L1_Mus1 LINE L1 -495 6072 6019 1 1436 3399 73 32 9 chrX 111636807 111637274 -55013022 + L1_Mus1 LINE L1 6090 6567 0 1 1436 518 272 86 50 chrX 111637459 111637958 -55012338 + L1M2 LINE L1 3281 3797 -2346 1 1436 23 33 0 0 chrX 111639450 111639480 -55010816 + AT_rich Low_complexity Low_complexity 1 30 0 1 1436 22 35 0 0 chrX 111639547 111639576 -55010720 + AT_rich Low_complexity Low_complexity 1 29 0 1 1436 1192 103 0 0 chrX 111639813 111639987 -55010309 + L1_Mus2 LINE L1 6393 6566 0 1 1436 487 310 36 27 chrX 111640022 111640241 -55010055 + ID_B1 SINE B4 3 223 -1 1 1436 3080 211 61 37 chrX 111641437 111642220 -55008076 + RLTR40 LTR ERVK 3 804 -13 1 1436 1275 77 0 11 chrX 111642687 111642871 -55007425 - L1Md_F2 LINE L1 -1 6581 6400 1 1436 21 0 0 0 chrX 111644782 111644803 -55005493 + AT_rich Low_complexity Low_complexity 1 21 0 1 1436 717 282 73 78 chrX 111644991 111645423 -55004873 - L1MA5 LINE L1 -364 5936 5483 1 1436 1228 55 18 0 chrX 111645423 111645587 -55004709 + L1Md_F3 LINE L1 6417 6583 -1 1 1436 717 301 43 57 chrX 111645587 111645872 -55004424 - L1MA5 LINE L1 -818 5482 5192 1 1436 324 333 38 35 chrX 111645965 111646142 -55004154 - L1MA5 LINE L1 -1086 5060 4890 1 1436 486 0 0 0 chrX 111646222 111646276 -55004020 + (TC)n Simple_repeat Simple_repeat 2 55 0 1 1436 351 292 47 9 chrX 111646297 111646511 -55003785 - L1MA5 LINE L1 -1358 4782 4561 1 1436 452 290 53 11 chrX 111646524 111646712 -55003584 - L1MA5 LINE L1 -1663 4480 4285 1 1436 40765 11 1 6 chrX 111646714 111653122 -54997174 - L1Md_A LINE L1 -1 6581 208 1 1436 342 305 83 10 chrX 111653118 111653358 -54996938 - L1MA5 LINE L1 -1842 4301 4028 1 1436 391 308 156 33 chrX 111653496 111653619 -54996677 - L1MA5 LINE L1 -2120 4023 3892 1 1436 1848 58 4 4 chrX 111653619 111653861 -54996435 + L1Md_T LINE L1 6341 6582 0 1 1436 391 308 156 33 chrX 111653861 111653995 -54996301 - L1MA5 LINE L1 -2252 3891 3734 1 1436 2971 127 12 14 chrX 111653995 111654481 -54995815 - L1_Mus4 LINE L1 -8 6628 6144 1 1436 391 308 156 33 chrX 111654481 111655170 -54995126 - L1MA5 LINE L1 -2410 3733 2960 1 1436 231 322 78 9 chrX 111655435 111655551 -54994745 + MER5A DNA MER1_type 20 143 -46 1 1436 21 0 0 0 chrX 111656572 111656593 -54993703 + AT_rich Low_complexity Low_complexity 1 21 0 1 1436 243 61 0 0 chrX 111657102 111657135 -54993161 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 1 1436 702 256 42 0 chrX 111657531 111657699 -54992597 - B3 SINE B2 -36 180 6 1 1436 212 200 28 28 chrX 111658140 111658212 -54992084 + T-rich Low_complexity Low_complexity 4 75 0 1 1436 518 62 12 0 chrX 111658394 111658475 -54991821 - L1Md_F2 LINE L1 0 6582 6501 1 1436 708 197 0 98 chrX 111658524 111658687 -54991609 + B1_Mus1 SINE Alu 1 147 -1 1 1436 519 60 0 0 chrX 111659169 111659236 -54991060 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 1 1436 210 106 0 78 chrX 111659277 111659328 -54990968 + T-rich Low_complexity Low_complexity 6 52 0 1 1436 233 333 12 12 chrX 111659490 111659575 -54990721 - ID4 SINE ID -59 93 9 1 1436 479 246 199 8 chrX 111659664 111659795 -54990501 - RSINE1 SINE B4 -4 161 6 1 1436 2366 134 19 19 chrX 111661710 111662122 -54988174 - Lx LINE L1 -1 6653 6242 1 1436 26 0 0 0 chrX 111662388 111662414 -54987882 + AT_rich Low_complexity Low_complexity 1 26 0 1 1436 940 121 139 0 chrX 111662423 111662588 -54987708 + B2_Mm2 SINE B2 1 188 -7 1 1436 1078 83 0 0 chrX 111663680 111663824 -54986472 + B1_Mus2 SINE Alu 1 144 -3 1 1436 255 61 0 0 chrX 111663824 111663857 -54986439 + (TAA)n Simple_repeat Simple_repeat 2 34 0 1 1436 349 357 49 21 chrX 111664073 111664216 -54986080 - B3A SINE B2 -46 152 6 1 1436 225 180 0 0 chrX 111664940 111664990 -54985306 + T-rich Low_complexity Low_complexity 1 50 0 1 1436 31 76 0 0 chrX 111665455 111665521 -54984775 + AT_rich Low_complexity Low_complexity 1 66 0 2 1436 1818 124 62 16 chrX 111665535 111665839 -54984457 - Lx LINE L1 -14 6640 6323 2 1436 414 0 0 0 chrX 111665969 111666015 -54984281 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1436 291 54 0 0 chrX 111666015 111666051 -54984245 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1436 23 54 0 0 chrX 111666327 111666364 -54983932 + AT_rich Low_complexity Low_complexity 1 37 0 2 1436 368 160 171 32 chrX 111666373 111666496 -54983800 - Lx9 LINE L1 -10 7634 7495 2 1436 2641 125 40 31 chrX 111667881 111668359 -54981937 - Lx3_Mus LINE L1 -1 7008 6527 2 1436 207 0 0 0 chrX 111668391 111668414 -54981882 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1436 5339 55 1 3 chrX 111668718 111669410 -54980886 + L1_Mm LINE L1 3970 4660 -1223 2 1436 1164 60 12 0 chrX 111669411 111669577 -54980719 + L1Md_F2 LINE L1 6400 6567 -15 2 1436 824 245 57 5 chrX 111670035 111670228 -54980068 - MTD LTR MaLR -14 405 203 2 1436 925 124 12 0 chrX 111670228 111670389 -54979907 + (TTTC)n Simple_repeat Simple_repeat 4 166 0 2 1436 1030 16 0 0 chrX 111670389 111670514 -54979782 - B1_Mus1 SINE Alu -12 136 12 2 1436 605 304 73 0 chrX 111670509 111670700 -54979596 - MTD LTR MaLR -214 205 1 2 1436 241 275 57 29 chrX 111672721 111672826 -54977470 - MIRb SINE MIR -45 223 112 2 1436 21 0 0 0 chrX 111672905 111672926 -54977370 + AT_rich Low_complexity Low_complexity 1 21 0 2 1437 1447 216 70 31 chrX 111675467 111675825 -54974471 - ORR1C2 LTR MaLR -10 374 3 2 1437 1925 335 77 30 chrX 111675934 111677022 -54973274 + Lx8 LINE L1 6201 7348 -125 2 1437 1788 135 21 0 chrX 111677022 111677310 -54972986 + Lx LINE L1 6361 6654 0 2 1437 1925 335 77 30 chrX 111677310 111677369 -54972927 + Lx8 LINE L1 7349 7402 -71 2 1437 1020 84 7 0 chrX 111677783 111677925 -54972371 - MTB_Mm LTR MaLR 0 407 265 2 1437 1465 27 11 5 chrX 111677914 111678102 -54972194 + MTB LTR MaLR 212 400 0 2 1437 250 318 47 0 chrX 111678192 111678277 -54972019 + L2a LINE L2 3330 3418 -8 2 1437 2001 136 23 29 chrX 111678653 111679001 -54971295 + Lx LINE L1 6302 6647 -7 2 1437 5817 129 124 34 chrX 111679004 111680105 -54970191 + Lx3A LINE L1 5739 6969 -12 2 1437 477 0 0 0 chrX 111680105 111680158 -54970138 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 2 1437 2287 133 45 0 chrX 111680376 111680758 -54969538 + Lx LINE L1 6256 6654 0 2 1437 396 0 0 0 chrX 111680797 111680841 -54969455 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1437 370 318 113 6 chrX 111680881 111681058 -54969238 + RLTR25B LTR ERVK 626 821 -207 2 1437 1056 204 6 159 chrX 111681195 111681534 -54968762 + RLTR25B LTR ERVK 742 1028 0 2 1437 834 197 116 19 chrX 111681542 111681749 -54968547 + Lx4B LINE L1 6831 7057 -1 2 1437 3359 193 102 48 chrX 111681926 111682006 -54968290 - RLTR25B LTR ERVK -150 878 815 2 1437 7161 45 2 2 chrX 111682006 111682887 -54967409 + L1Md_F2 LINE L1 5688 6568 -14 2 1437 3359 193 102 48 chrX 111682887 111683639 -54966657 - RLTR25B LTR ERVK -214 814 1 2 1437 453 211 0 22 chrX 111683639 111683731 -54966565 - Lx5 LINE L1 -245 6805 6716 2 1437 226 222 185 0 chrX 111684171 111684252 -54966044 + L1MC LINE L1 4624 4719 -1427 2 1437 1249 196 29 40 chrX 111684311 111684588 -54965708 + RLTR46 LTR ERVK 42 315 -5 2 1437 408 244 41 69 chrX 111684597 111684742 -54965554 + IAPEY3-int LTR ERVK 3 143 -7537 2 1437 3356 246 68 44 chrX 111684793 111685786 -54964510 + IAPEY3-int LTR ERVK 535 1551 -6129 2 1437 5304 209 12 16 chrX 111685783 111687048 -54963248 + IAPEY3-int LTR ERVK 4417 5699 -1882 2 1437 2507 154 40 31 chrX 111687067 111687716 -54962580 + IAPEY3-int LTR ERVK 6849 7529 -151 2 1437 2609 48 0 0 chrX 111687718 111688030 -54962266 + RLTR10-int LTR ERVK 1486 1797 -190 2 1437 744 102 0 0 chrX 111688055 111688163 -54962133 + IAPEY3-int LTR ERVK 7474 7581 0 2 1437 1263 200 32 43 chrX 111688172 111688449 -54961847 + RLTR46 LTR ERVK 42 315 -5 2 1437 456 291 131 30 chrX 111688507 111688936 -54961360 + L1MC LINE L1 4837 5308 -838 2 1437 295 329 44 12 chrX 111689301 111689461 -54960835 - MLT-int LTR MaLR -8 1727 1563 2 1437 4794 78 18 18 chrX 111689473 111690138 -54960158 + L1Md_F2 LINE L1 5906 6570 -12 2 1437 7234 229 36 16 chrX 111690140 111691816 -54958480 + MERVL_2A-int LTR ERVL 3774 5483 -278 2 1437 248 157 0 105 chrX 111691819 111691876 -54958420 + U5 snRNA snRNA 1 51 -65 2 1437 1957 199 9 53 chrX 111691901 111692335 -54957961 + L1VL4 LINE L1 193 607 -5695 2 1437 3330 140 18 9 chrX 111692332 111692901 -54957395 + L1_Mur2 LINE L1 3751 4324 -1553 2 1437 7018 113 25 3 chrX 111692897 111693942 -54956354 + Lx LINE L1 5587 6654 0 2 1437 1070 199 43 14 chrX 111693942 111694218 -54956078 + MERVL_2A-int LTR ERVL 5476 5759 -2 2 1437 1202 210 234 38 chrX 111694220 111694566 -54955730 + MT2A LTR ERVL 1 414 -119 2 1437 663 310 36 79 chrX 111694566 111694895 -54955401 + RLTR18 LTR ERVK 5 319 -297 2 1437 594 319 42 33 chrX 111694904 111695236 -54955060 + RLTR18 LTR ERVK 192 616 0 2 1437 319 188 128 38 chrX 111695236 111695357 -54954939 + MT2A LTR ERVL 401 533 0 2 1437 204 224 0 17 chrX 111696231 111696290 -54954006 + (CAGA)n Simple_repeat Simple_repeat 2 59 0 2 1437 348 24 0 0 chrX 111696290 111696331 -54953965 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1437 513 0 0 0 chrX 111696331 111696387 -54953909 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 1437 847 294 97 17 chrX 111696881 111697231 -54953065 + MLT2C1 LTR ERVL 5 382 -15 2 1437 394 244 24 12 chrX 111697395 111697478 -54952818 + MER20 DNA MER1_type 2 85 -134 2 1437 21 36 0 0 chrX 111697515 111697543 -54952753 + AT_rich Low_complexity Low_complexity 1 28 0 2 1437 922 251 41 25 chrX 111697694 111698002 -54952294 + Lx9 LINE L1 5677 5972 -1672 2 1437 2557 290 79 70 chrX 111698020 111698238 -54952058 + Lx9 LINE L1 6097 6302 -1342 2 1437 1233 101 0 0 chrX 111698238 111698417 -54951879 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 2 1437 2557 290 79 70 chrX 111698417 111699623 -54950673 + Lx9 LINE L1 6303 7528 -116 2 1437 258 32 0 0 chrX 111699623 111699654 -54950642 + (TAA)n Simple_repeat Simple_repeat 1 31 0 2 1437 2557 290 79 70 chrX 111699654 111699757 -54950539 + Lx9 LINE L1 7529 7638 -6 2 1437 711 297 151 7 chrX 111701069 111701354 -54948942 - MER54A LTR ERVL -2 899 574 2 1437 261 0 0 0 chrX 111702123 111702152 -54948144 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1437 349 327 87 83 chrX 111702349 111702962 -54947334 + BLACKJACK DNA AcHobo 1355 1969 -975 2 1437 246 299 0 85 chrX 111703066 111703172 -54947124 + BC1_Mm scRNA scRNA 11 107 -45 2 1437 532 316 115 15 chrX 111703154 111703553 -54946743 + BLACKJACK DNA AcHobo 1993 2431 -513 2 1437 588 289 38 29 chrX 111703938 111704148 -54946148 - B3 SINE B2 0 216 5 2 1437 31 26 0 0 chrX 111704689 111704727 -54945569 + AT_rich Low_complexity Low_complexity 1 38 0 2 1437 216 0 0 0 chrX 111705365 111705389 -54944907 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1437 572 0 15 0 chrX 111706367 111706435 -54943861 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 2 1437 354 299 135 22 chrX 111707258 111707441 -54942855 + MIR SINE MIR 43 243 -25 2 1437 261 0 0 0 chrX 111707846 111707875 -54942421 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1437 360 0 0 0 chrX 111707875 111707914 -54942382 + (GA)n Simple_repeat Simple_repeat 2 41 0 2 1437 382 324 55 41 chrX 111708373 111708518 -54941778 + B1F SINE Alu 3 149 0 2 1437 6685 145 51 2 chrX 111708841 111710096 -54940200 - Lx4A LINE L1 -1139 5919 4580 2 1437 580 168 0 0 chrX 111710106 111710201 -54940095 - Lx4A LINE L1 -367 6691 6597 2 1437 21 0 0 0 chrX 111710217 111710238 -54940058 + AT_rich Low_complexity Low_complexity 1 21 0 2 1437 6169 167 30 11 chrX 111710268 111711377 -54938919 + Lx4A LINE L1 5926 7055 -3 2 1437 24 0 0 0 chrX 111711380 111711404 -54938892 + AT_rich Low_complexity Low_complexity 1 24 0 2 1437 1978 36 32 0 chrX 111712030 111712453 -54937843 - L1Md_F3 LINE L1 0 6584 6306 2 1437 582 103 0 0 chrX 111712722 111712809 -54937487 + (TCTA)n Simple_repeat Simple_repeat 2 88 0 2 1437 21 36 0 0 chrX 111714071 111714099 -54936197 + AT_rich Low_complexity Low_complexity 1 28 0 2 1437 229 259 49 128 chrX 111714155 111714179 -54936117 - B2_Mm2 SINE B2 -7 188 167 2 1437 201 74 0 0 chrX 111714179 111714206 -54936090 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 1437 437 263 39 119 chrX 111714206 111714390 -54935906 - B3A SINE B2 -29 166 1 2 1437 239 220 114 48 chrX 111714587 111714692 -54935604 - L1M5 LINE L1 -538 5635 5524 2 1437 931 228 99 95 chrX 111715288 111715747 -54934549 + MT2B LTR ERVL 3 601 0 2 1437 368 342 90 8 chrX 111715857 111716125 -54934171 - L1M5 LINE L1 -620 5544 5255 2 1437 1250 287 45 0 chrX 111716562 111717005 -54933291 + L1_Mur3 LINE L1 4826 5288 -592 2 1437 488 295 86 26 chrX 111717186 111717484 -54932812 + L1_Mur3 LINE L1 5309 5626 -674 2 1437 544 338 49 31 chrX 111717933 111718257 -54932039 + Lx8 LINE L1 7082 7411 -62 2 1437 378 352 52 22 chrX 111718329 111718561 -54931735 + L1M4 LINE L1 4399 4637 -1509 2 1437 256 343 9 9 chrX 111718606 111718736 -54931560 + L1M4 LINE L1 4699 4828 -1312 2 1437 386 352 17 100 chrX 111719284 111719464 -54930832 + RSINE1 SINE B4 1 165 0 2 1437 213 39 0 0 chrX 111719549 111719575 -54930721 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1437 29593 40 2 14 chrX 111719658 111725805 -54924491 - L1Md_T LINE L1 -2 6580 511 2 1437 227 318 22 43 chrX 111726658 111726750 -54923546 + MIRb SINE MIR 93 182 -86 2 1437 679 62 41 0 chrX 111726855 111726952 -54923344 + URR1B DNA MER1_type 125 225 0 2 1437 1444 282 36 20 chrX 111726966 111727407 -54922889 - Lx9 LINE L1 -560 7084 6637 2 1437 682 234 0 14 chrX 111727630 111727769 -54922527 + B1_Mur2 SINE Alu 12 148 -1 2 1437 1819 163 6 58 chrX 111727802 111728147 -54922149 + ORR1A4 LTR MaLR 3 329 0 2 1437 406 304 13 118 chrX 111728293 111728446 -54921850 + RSINE1 SINE B4 8 144 -21 2 1437 347 261 70 28 chrX 111728457 111728599 -54921697 + L1MC LINE L1 4145 4292 -1854 2 1437 485 277 62 6 chrX 111728783 111728943 -54921353 + Lx8 LINE L1 6337 6505 -968 2 1437 4056 211 14 28 chrX 111728965 111729837 -54920459 + RMER13A LTR ERVK 1 860 0 2 1437 1107 299 43 28 chrX 111729845 111730237 -54920059 + Lx8 LINE L1 6844 7241 -232 2 1437 378 0 0 0 chrX 111730845 111730887 -54919409 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1437 235 215 0 44 chrX 111731073 111731141 -54919155 + (TGAA)n Simple_repeat Simple_repeat 1 65 0 2 1437 299 271 0 0 chrX 111731322 111731392 -54918904 + (TG)n Simple_repeat Simple_repeat 1 70 0 2 1437 662 328 11 6 chrX 111731435 111731616 -54918680 - B4A SINE B4 -103 189 8 2 1437 654 301 24 71 chrX 111731625 111731836 -54918460 - ID_B1 SINE B4 -21 203 3 2 1437 1041 251 104 35 chrX 111731891 111732237 -54918059 - ORR1D2 LTR MaLR 0 370 1 2 1437 374 288 126 0 chrX 111732482 111732673 -54917623 - L1MA4 LINE L1 -425 5875 5661 2 1437 21 0 0 0 chrX 111735488 111735509 -54914787 + AT_rich Low_complexity Low_complexity 1 21 0 2 1437 933 279 76 9 chrX 111735959 111736302 -54913994 - ORR1D2 LTR MaLR 0 370 5 3 1437 21 0 0 0 chrX 111737220 111737241 -54913055 + AT_rich Low_complexity Low_complexity 1 21 0 3 1437 24 85 0 0 chrX 111737329 111737388 -54912908 + AT_rich Low_complexity Low_complexity 1 59 0 3 1437 322 340 13 0 chrX 111737804 111737957 -54912339 + L1MA5 LINE L1 6144 6298 -2 3 1437 216 135 0 0 chrX 111738041 111738078 -54912218 + (TAA)n Simple_repeat Simple_repeat 2 38 0 3 1437 404 319 81 7 chrX 111738277 111738413 -54911883 + B1_Mur4 SINE Alu 5 150 0 3 1437 1566 228 113 70 chrX 111738551 111738896 -54911400 + RMER6C LTR ERVK 1 378 -312 3 1437 243 0 0 0 chrX 111738896 111738923 -54911373 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1437 1566 228 113 70 chrX 111738923 111739238 -54911058 + RMER6C LTR ERVK 379 690 0 3 1437 513 250 153 0 chrX 111739260 111739404 -54910892 - B3 SINE B2 -3 213 48 3 1437 3870 169 32 51 chrX 111739444 111740228 -54910068 + RLTR25B LTR ERVK 3 771 -257 3 1437 293 151 312 54 chrX 111740224 111740336 -54909960 + RLTR25B LTR ERVK 888 1028 0 3 1437 188 200 18 0 chrX 111740386 111740441 -54909855 + CT-rich Low_complexity Low_complexity 2 57 0 3 1437 194 163 0 39 chrX 111740464 111740515 -54909781 + CT-rich Low_complexity Low_complexity 3 51 0 3 1437 306 280 35 78 chrX 111740516 111740632 -54909664 - B1_Mur2 SINE Alu -15 134 24 3 1437 447 345 64 15 chrX 111740637 111740902 -54909394 - Lx8 LINE L1 -9 7464 7187 3 1437 390 211 2 0 chrX 111740925 111741005 -54909291 - RLTR31_Mm LTR ERVK 0 561 492 3 1437 24940 134 18 39 chrX 111741095 111746719 -54903577 - L1_Mus2 LINE L1 0 6566 1107 3 1437 3921 54 2 0 chrX 111746719 111747203 -54903093 - L1Md_F3 LINE L1 -15 6569 6085 3 1437 4262 164 53 49 chrX 111747203 111747837 -54902459 - L1_Mus2 LINE L1 -5528 1106 437 3 1437 3983 199 31 28 chrX 111747834 111748820 -54901476 - L1_Mur3 LINE L1 -1716 4164 3176 3 1437 574 293 132 8 chrX 111749258 111749509 -54900787 - Lx7 LINE L1 -1792 5904 5623 3 1437 2233 63 0 3 chrX 111749505 111749791 -54900505 - L1_Mus3 LINE L1 -726 5912 5628 3 1437 4417 96 115 16 chrX 111749791 111750479 -54899817 + L1_Mus3 LINE L1 5883 6638 0 3 1437 1329 261 9 92 chrX 111750479 111750499 -54899797 - L1_Mur1 LINE L1 -255 5631 5630 3 1437 313 337 81 27 chrX 111750499 111750685 -54899611 + B3A SINE B2 3 198 0 3 1437 1329 269 12 94 chrX 111750685 111750910 -54899386 - L1_Mur1 LINE L1 -257 5629 5384 3 1437 323 201 30 68 chrX 111751398 111751533 -54898763 - RLTR11A LTR ERVK -3 557 416 3 1437 273 302 21 75 chrX 111751509 111751602 -54898694 + B1F1 SINE Alu 62 149 0 3 1437 237 33 0 0 chrX 111751638 111751668 -54898628 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1437 775 78 23 15 chrX 111752162 111752292 -54898004 - L1Md_F2 LINE L1 -3 6579 6449 3 1437 30 45 0 0 chrX 111753058 111753102 -54897194 + AT_rich Low_complexity Low_complexity 1 44 0 3 1437 934 216 63 10 chrX 111753581 111753787 -54896509 + RMER5 LTR ERV1 48 264 -270 3 1437 277 250 10 0 chrX 111753787 111753887 -54896409 + Lx6 LINE L1 7351 7451 -9 3 1437 597 73 9 43 chrX 111754126 111754241 -54896055 + (TA)n Simple_repeat Simple_repeat 2 112 0 3 1437 259 173 40 61 chrX 111754320 111754402 -54895894 - L1_Mur3 LINE L1 -910 5449 5337 3 1437 249 264 39 157 chrX 111754404 111754557 -54895739 + B1_Mur2 SINE Alu 2 136 -13 3 1437 497 58 14 0 chrX 111754570 111754639 -54895657 + (TC)n Simple_repeat Simple_repeat 1 70 0 3 1437 576 127 9 18 chrX 111754669 111754781 -54895515 + (TA)n Simple_repeat Simple_repeat 1 111 0 3 1437 1433 45 0 6 chrX 111754789 111754953 -54895343 + L1_Mm LINE L1 5424 5586 -297 3 1437 9020 3 0 0 chrX 111754953 111755949 -54894347 + L1Md_A LINE L1 5587 6582 0 3 1437 1433 132 0 2 chrX 111755949 111755991 -54894305 + L1_Mm LINE L1 5587 5598 -285 3 1437 626 191 0 7 chrX 111755991 111756128 -54894168 + (CA)n Simple_repeat Simple_repeat 1 136 0 3 1437 1509 149 17 87 chrX 111756139 111756485 -54893811 - RLTRETN_Mm LTR ERVK 0 322 1 3 1437 248 175 49 66 chrX 111756544 111756605 -54893691 + L1_Mur3 LINE L1 5337 5396 -484 3 1437 423 0 0 0 chrX 111756617 111756664 -54893632 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1437 556 293 57 20 chrX 111756674 111756970 -54893326 - L1_Rod LINE L1 -525 5322 5016 3 1437 619 313 66 0 chrX 111757085 111757283 -54893013 + B3 SINE B2 6 216 0 3 1437 25 0 0 0 chrX 111757294 111757319 -54892977 + AT_rich Low_complexity Low_complexity 1 25 0 3 1437 21 36 0 0 chrX 111757829 111757857 -54892439 + AT_rich Low_complexity Low_complexity 1 28 0 3 1437 21 36 0 0 chrX 111758979 111759007 -54891289 + AT_rich Low_complexity Low_complexity 1 28 0 3 1437 30 27 0 0 chrX 111759029 111759066 -54891230 + AT_rich Low_complexity Low_complexity 1 37 0 3 1437 742 236 56 61 chrX 111759081 111759279 -54891017 + B3 SINE B2 20 216 0 3 1437 747 316 28 16 chrX 111759759 111760102 -54890194 + Lx7 LINE L1 6794 7151 -322 3 1437 22 70 0 0 chrX 111760875 111760918 -54889378 + AT_rich Low_complexity Low_complexity 1 43 0 3 1437 23 54 0 0 chrX 111761095 111761132 -54889164 + AT_rich Low_complexity Low_complexity 1 37 0 3 1437 358 352 13 27 chrX 111761507 111761656 -54888640 - ID_B1 SINE B4 0 224 78 3 1437 403 257 132 11 chrX 111761708 111761897 -54888399 - LTR37A LTR ERV1 0 426 215 3 1437 414 0 0 0 chrX 111765675 111765721 -54884575 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 1437 393 22 0 0 chrX 111765721 111765766 -54884530 + (GA)n Simple_repeat Simple_repeat 2 47 0 3 1437 1033 116 112 5 chrX 111765766 111766027 -54884269 + RMER6C LTR ERVK 8 332 -388 3 1437 550 170 0 0 chrX 111766034 111766128 -54884168 + Lx2 LINE L1 6810 6903 -94 3 1437 18665 124 11 28 chrX 111766126 111768624 -54881672 + L1_Mur1 LINE L1 1657 3992 -1894 3 1437 3058 83 2 0 chrX 111768624 111769023 -54881273 + MTB LTR MaLR 1 400 0 3 1437 18665 98 12 13 chrX 111769023 111770108 -54880188 + L1_Mur1 LINE L1 3993 5054 -832 3 1437 2200 92 13 7 chrX 111770108 111770415 -54879881 - RLTR27 LTR ERVK 0 309 1 3 1437 33816 30 0 0 chrX 111770423 111775152 -54875144 - L1Md_T LINE L1 0 6582 1879 3 1437 1478 227 39 30 chrX 111775152 111775706 -54874590 - MMERVK10C-int LTR ERVK -10 7571 6907 3 1437 6291 299 37 44 chrX 111776196 111780553 -54869743 - MMERVK10C-int LTR ERVK -2105 5476 1166 3 1437 250 301 0 35 chrX 111780864 111780950 -54869346 + T-rich Low_complexity Low_complexity 2 84 0 3 1437 637 260 49 22 chrX 111780953 111781138 -54869158 - MMERVK10C-int LTR ERVK -1143 844 655 3 1437 354 67 7 0 chrX 111781170 111781223 -54869073 - MMERVK10C-int LTR ERVK -7314 267 163 3 1437 9230 106 22 19 chrX 111781247 111782874 -54867422 + Lx3_Mus LINE L1 5198 6830 -179 3 1437 1099 65 0 0 chrX 111782874 111783012 -54867284 + B1_Mus1 SINE Alu 1 138 -10 3 1437 216 0 0 0 chrX 111783012 111783036 -54867260 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1437 9230 110 28 23 chrX 111783036 111783220 -54867076 + Lx3_Mus LINE L1 6831 7008 -1 3 1437 276 30 0 0 chrX 111783511 111783544 -54866752 + (T)n Simple_repeat Simple_repeat 1 33 0 3 1437 5213 66 13 4 chrX 111783817 111784499 -54865797 + L1Md_F2 LINE L1 5893 6580 -2 3 1437 22 0 0 0 chrX 111785703 111785725 -54864571 + AT_rich Low_complexity Low_complexity 1 22 0 3 1437 21 0 0 0 chrX 111786151 111786172 -54864124 + AT_rich Low_complexity Low_complexity 1 21 0 3 1437 1809 239 78 14 chrX 111786231 111786711 -54863585 - Lx4B LINE L1 -232 6826 6027 3 1437 6576 131 29 11 chrX 111786694 111787027 -54863269 - Lx LINE L1 -6 6648 6324 3 1437 222 0 79 0 chrX 111787027 111787065 -54863231 + (TTG)n Simple_repeat Simple_repeat 2 42 0 3 1437 6576 130 16 6 chrX 111787065 111787816 -54862480 - Lx LINE L1 -331 6323 5545 3 1437 30 93 0 0 chrX 111788135 111788221 -54862075 + AT_rich Low_complexity Low_complexity 1 86 0 3 1437 760 273 54 82 chrX 111788776 111789512 -54860784 - L1_Rod LINE L1 -2253 3890 3170 3 1437 196 28 0 77 chrX 111789512 111789551 -54860745 + (TTTG)n Simple_repeat Simple_repeat 4 39 0 3 1437 721 279 74 118 chrX 111789551 111789684 -54860612 - L1_Rod LINE L1 -2678 3169 3033 3 1437 2496 194 51 23 chrX 111789685 111790197 -54860099 - RLTR11A LTR ERVK 0 528 3 3 1437 1282 228 20 129 chrX 111790200 111790749 -54859547 - L1_Rod LINE L1 -2811 3036 2548 3 1437 505 253 63 32 chrX 111790783 111791135 -54859161 - L1_Rod LINE L1 -4476 1371 1008 3 1437 315 0 0 0 chrX 111791135 111791170 -54859126 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 3 1437 3304 91 2 4 chrX 111791193 111791648 -54858648 - L1Md_F2 LINE L1 -5 6577 6124 3 1437 5938 106 3 1 chrX 111791649 111792519 -54857777 - L1_Mm LINE L1 -437 5446 4575 3 1437 419 97 32 0 chrX 111792511 111792573 -54857723 + L1Md_A LINE L1 265 328 -6291 3 1437 35356 68 6 23 chrX 111792549 111798022 -54852274 + L1Md_A LINE L1 121 5589 -297 3 1437 8223 38 1 1 chrX 111798022 111799017 -54851279 + L1Md_A LINE L1 5590 6584 -1 3 1437 611 117 0 0 chrX 111799023 111799117 -54851179 - L1_Mm LINE L1 -1298 4585 4492 3 1437 11776 38 0 1 chrX 111799104 111800561 -54849735 + L1_Mm LINE L1 3069 4524 -1359 3 1437 462 141 24 0 chrX 111800561 111800646 -54849650 + B2_Mm1t SINE B2 100 186 -7 3 1437 24228 107 20 12 chrX 111800646 111804029 -54846267 + L1_Mur1 LINE L1 1448 4839 -1047 3 1437 261 0 0 0 chrX 111804029 111804058 -54846238 + (TA)n Simple_repeat Simple_repeat 1 29 0 3 179 24228 107 20 12 chrX 111804058 111804510 -54845786 + L1_Mur1 LINE L1 4840 5310 -576 3 1438 660 263 48 45 chrX 111804589 111804946 -54845350 + RLTR45 LTR ERVK 75 482 0 3 1438 1171 90 24 0 chrX 111804946 111805112 -54845184 + Lx3A LINE L1 5306 5475 -411 3 1438 9025 122 15 5 chrX 111805604 111807108 -54843188 + Lx3A LINE L1 5463 6978 -3 3 1438 462 195 115 0 chrX 111807119 111807232 -54843064 - RMER17C LTR ERVK -284 126 1 3 1438 894 148 0 7 chrX 111808689 111808825 -54841471 + B1_Mus1 SINE Alu 7 141 -7 3 1438 198 0 0 0 chrX 111808829 111808851 -54841445 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 3 1438 1643 158 3 9 chrX 111808882 111809167 -54841129 + L1VL1 LINE L1 217 750 -5974 3 1438 299 146 0 0 chrX 111809167 111809215 -54841081 + L1VL1 LINE L1 480 527 -6089 3 1438 10224 80 0 1 chrX 111809209 111810575 -54839721 + L1Md_F2 LINE L1 4222 5586 -297 3 1438 7366 85 2 3 chrX 111810575 111811570 -54838726 + L1Md_F2 LINE L1 5587 6580 -2 3 1438 638 140 9 0 chrX 111811660 111811774 -54838522 + (TA)n Simple_repeat Simple_repeat 1 115 0 3 1438 591 318 23 28 chrX 111812504 111812721 -54837575 + B3 SINE B2 1 216 0 3 1438 1979 158 11 14 chrX 111812743 111813103 -54837193 + RLTR15 LTR ERVK 1 359 0 3 1438 976 70 7 7 chrX 111813724 111813867 -54836429 + (TCTA)n Simple_repeat Simple_repeat 2 144 0 3 1438 294 95 0 0 chrX 111813868 111813910 -54836386 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1438 35 83 0 0 chrX 111814374 111814458 -54835838 + AT_rich Low_complexity Low_complexity 1 84 0 3 1438 21 57 0 0 chrX 111815112 111815147 -54835149 + AT_rich Low_complexity Low_complexity 1 35 0 3 1438 978 268 23 36 chrX 111815831 111816215 -54834081 - L1_Rod LINE L1 -1671 4176 3798 3 1438 962 311 102 14 chrX 111816465 111816886 -54833410 + Lx8 LINE L1 6665 7122 -351 3 1438 207 275 32 0 chrX 111817137 111817218 -54833078 + MIRm SINE MIR 57 143 -125 3 1438 37505 45 1 3 chrX 111817354 111823604 -54826692 - L1Md_T LINE L1 0 6585 256 3 1438 302 88 29 29 chrX 111823886 111823956 -54826340 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 1438 540 0 0 0 chrX 111823956 111824015 -54826281 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1438 242 269 15 0 chrX 111824150 111824217 -54826079 + Lx8 LINE L1 7270 7337 -136 3 1438 3280 157 70 29 chrX 111824259 111824916 -54825380 - RMER6C LTR ERVK -6 684 1 4 1438 233 171 0 0 chrX 111825119 111825160 -54825136 - MER53 DNA hAT -136 57 17 4 1438 25 31 0 0 chrX 111825460 111825492 -54824804 + AT_rich Low_complexity Low_complexity 1 32 0 4 1438 277 316 0 0 chrX 111825595 111825734 -54824562 + A-rich Low_complexity Low_complexity 1 139 0 4 1438 1056 255 81 17 chrX 111825877 111826172 -54824124 - Lx6 LINE L1 -175 7285 6972 4 1438 265 135 135 0 chrX 111826166 111826218 -54824078 + Lx2 LINE L1 5714 5772 -1225 4 1438 216 214 0 0 chrX 111826218 111826260 -54824036 + A-rich Low_complexity Low_complexity 1 42 0 4 1438 3389 243 62 23 chrX 111826262 111827193 -54823103 + Lx6 LINE L1 5757 6724 -736 4 1438 39 50 0 0 chrX 111827456 111827516 -54822780 + AT_rich Low_complexity Low_complexity 1 60 0 4 1438 386 393 56 41 chrX 111827633 111827901 -54822395 + B4 SINE B4 11 282 -10 4 1438 423 0 0 0 chrX 111828258 111828305 -54821991 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 4 1438 184 299 38 25 chrX 111828306 111828385 -54821911 - L3b LINE CR1 -329 153 74 4 1438 266 319 106 57 chrX 111828989 111829112 -54821184 - PB1D10 SINE Alu -20 129 1 4 1438 371 302 31 0 chrX 111829216 111829312 -54820984 + B4A SINE B4 1 99 -193 4 1438 1150 281 122 8 chrX 111829317 111829687 -54820609 + MTD LTR MaLR 8 419 0 4 1438 380 350 0 20 chrX 111829687 111829815 -54820481 + B4A SINE B4 100 224 -68 4 1438 8437 79 1 0 chrX 111829816 111830940 -54819356 + L1Md_F2 LINE L1 4461 5585 -298 4 1438 7151 76 26 7 chrX 111830941 111831917 -54818379 + L1Md_F2 LINE L1 5587 6580 -2 4 1438 250 299 0 72 chrX 111832030 111832113 -54818183 + B4A SINE B4 216 292 0 4 1438 397 305 40 22 chrX 111832599 111832824 -54817472 + L1MCa LINE L1 670 898 -5610 4 1438 3261 277 85 73 chrX 111832841 111834288 -54816008 - Lx5 LINE L1 -26 7434 5587 4 1438 330 286 35 26 chrX 111834461 111834576 -54815720 + L1MCa LINE L1 1476 1591 -4917 4 1438 206 356 11 0 chrX 111834650 111834740 -54815556 + L2a LINE L2 3336 3426 0 4 1438 23 0 0 0 chrX 111834932 111834955 -54815341 + AT_rich Low_complexity Low_complexity 1 23 0 4 1438 345 350 10 0 chrX 111835539 111835639 -54814657 - MER2 DNA MER2_type 0 345 245 4 1438 217 400 0 0 chrX 111836031 111836101 -54814195 - ID4_ SINE ID -2 81 12 4 1438 260 367 18 44 chrX 111836650 111836764 -54813532 - L2b LINE L2 -314 3061 2951 4 1438 1383 201 71 54 chrX 111836780 111837148 -54813148 - ORR1D1 LTR MaLR 0 374 1 4 1438 3451 259 48 46 chrX 111837150 111838134 -54812162 - ORR1D1-int LTR MaLR -2 1368 383 4 1438 2084 169 57 101 chrX 111838152 111838645 -54811651 - RMER1A Other Other -5 1025 555 4 1438 1545 247 68 20 chrX 111838646 111839043 -54811253 + MTC LTR MaLR 6 421 0 4 1438 1637 230 15 6 chrX 111839052 111839134 -54811162 - ORR1D1-int LTR MaLR -1026 344 261 4 1438 309 51 0 0 chrX 111839134 111839173 -54811123 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1438 1637 230 15 6 chrX 111839173 111839431 -54810865 - ORR1D1-int LTR MaLR -1110 260 2 4 1438 1085 277 100 0 chrX 111839486 111839796 -54810500 - ORR1D1 LTR MaLR -33 341 1 4 1438 337 308 156 68 chrX 111839955 111840630 -54809666 + L1MC5 LINE L1 6828 7561 -400 4 1438 675 379 98 44 chrX 111840801 111841253 -54809043 - MLT1F1 LTR MaLR -91 457 3 4 1438 297 379 52 7 chrX 111841271 111841425 -54808871 - MLT1F1-int LTR MaLR -22 1467 1307 4 1438 182 215 185 0 chrX 111841815 111841880 -54808416 + L4 LINE RTE 1376 1452 -577 4 1438 6247 157 24 17 chrX 111842281 111842925 -54807371 - Lx4A LINE L1 0 7058 6411 4 1438 1803 143 90 94 chrX 111842925 111843402 -54806894 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1438 6247 157 24 17 chrX 111843402 111843848 -54806448 - Lx4A LINE L1 -648 6410 5961 4 1438 2077 145 71 0 chrX 111843819 111844198 -54806098 - Lx4A LINE L1 -959 6099 5694 4 1438 7558 88 54 3 chrX 111844198 111844446 -54805850 + L1Md_A LINE L1 4733 5036 -847 4 1438 4486 49 0 5 chrX 111844446 111845003 -54805293 - L1Md_F2 LINE L1 -2 6580 6027 4 1438 7558 68 30 1 chrX 111845003 111845986 -54804310 + L1Md_A LINE L1 5037 6020 -562 4 1438 5706 79 5 0 chrX 111845982 111846767 -54803529 - L1_Mm LINE L1 -1442 4441 3653 4 1438 1461 149 4 0 chrX 111846766 111847008 -54803288 + L1_Mur2 LINE L1 4932 5174 -703 4 1438 339 347 0 8 chrX 111847358 111847480 -54802816 - MLT1F1-int LTR MaLR -1245 126 6 4 1438 247 342 8 34 chrX 111847485 111847603 -54802693 - MLT1F1 LTR MaLR 0 408 294 4 1438 712 241 0 0 chrX 111849674 111849811 -54800485 - B1_Mur2 SINE Alu -8 141 5 4 1438 783 345 79 57 chrX 111849929 111850563 -54799733 - Lx8 LINE L1 -31 7442 6789 4 1438 1942 151 16 0 chrX 111850563 111850881 -54799415 - ORR1A2 LTR MaLR -4 323 1 4 1438 783 345 79 57 chrX 111850881 111850932 -54799364 - Lx8 LINE L1 -685 6788 6742 4 1438 579 292 10 10 chrX 111851137 111851341 -54798955 - L1_Rod LINE L1 -6505 667 464 4 1438 666 313 200 3 chrX 111851731 111852061 -54798235 + Lx8 LINE L1 6299 6693 -780 4 1438 2899 271 50 20 chrX 111852081 111853280 -54797016 + L1_Rod LINE L1 2253 3487 -2360 4 1438 224 350 110 59 chrX 111853333 111853509 -54796787 + L2 LINE L2 2471 2658 -761 4 1438 243 0 0 0 chrX 111853509 111853536 -54796760 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1438 1059 102 0 0 chrX 111853536 111853673 -54796623 - B1_Mus1 SINE Alu -11 137 1 4 1438 224 350 110 59 chrX 111853673 111853832 -54796464 + L2 LINE L2 2659 2823 -596 4 1438 29 28 0 0 chrX 111854942 111854978 -54795318 + AT_rich Low_complexity Low_complexity 1 36 0 4 1438 536 191 54 9 chrX 111855837 111855948 -54794348 - ORR1D2 LTR MaLR -251 119 4 4 1438 341 293 132 16 chrX 111856314 111856557 -54793739 - L1M3 LINE L1 -564 5748 5478 4 1438 414 0 0 0 chrX 111856609 111856655 -54793641 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1438 394 291 68 8 chrX 111856743 111856861 -54793435 - B4A SINE B4 -164 128 4 4 1438 359 288 8 0 chrX 111856911 111857043 -54793253 - L1M3 LINE L1 -782 5358 5226 4 1438 1704 235 35 110 chrX 111857043 111857126 -54793170 - RMER6D LTR ERVK -111 579 519 4 1438 2534 96 6 0 chrX 111857126 111857482 -54792814 - L1_Mus1 LINE L1 0 6567 6210 4 1438 1851 195 21 48 chrX 111857482 111858024 -54792272 - RMER6D LTR ERVK -172 518 1 4 1438 21 0 0 0 chrX 111858208 111858229 -54792067 + AT_rich Low_complexity Low_complexity 1 21 0 4 1438 3740 126 32 32 chrX 111858291 111859112 -54791184 + L1Md_F2 LINE L1 584 1414 -4469 4 1438 24757 90 11 9 chrX 111859098 111862675 -54787621 + L1Md_F2 LINE L1 2003 5585 -298 4 1438 7220 88 7 2 chrX 111862676 111863665 -54786631 + L1Md_F2 LINE L1 5587 6580 -2 4 1438 38275 47 0 3 chrX 111863756 111870642 -54779654 - L1Md_T LINE L1 0 6585 1 4 1438 22 0 0 0 chrX 111870645 111870667 -54779629 + AT_rich Low_complexity Low_complexity 1 22 0 4 1438 37222 42 2 1 chrX 111870667 111876503 -54773793 - L1Md_T LINE L1 -1 6584 646 4 1438 873 83 136 45 chrX 111876503 111876646 -54773650 - IAPLTR2a LTR ERVK 0 411 246 4 1438 2379 15 0 0 chrX 111876646 111876920 -54773376 + L1Md_T LINE L1 6309 6582 0 4 1438 873 83 136 45 chrX 111876920 111876952 -54773344 - IAPLTR2a LTR ERVK -166 245 220 4 1438 2325 171 36 26 chrX 111876995 111877463 -54772833 + RLTR20B3 LTR ERVK 1 473 -104 4 1438 252 0 0 0 chrX 111877464 111877492 -54772804 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1438 347 246 0 0 chrX 111877589 111877658 -54772638 + ORR1D1 LTR MaLR 4 72 -302 4 1438 216 0 0 0 chrX 111877744 111877768 -54772528 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1438 2635 60 49 3 chrX 111877768 111878136 -54772160 - IAPLTR2_Mm LTR ERVK -90 385 1 4 1438 1850 97 0 51 chrX 111878136 111878430 -54771866 - L1Md_Gf LINE L1 -5871 651 373 4 1438 22 0 0 0 chrX 111878504 111878526 -54771770 + AT_rich Low_complexity Low_complexity 1 22 0 4 1438 234 219 122 47 chrX 111878526 111878698 -54771598 - Lx9 LINE L1 -5 7639 7455 4 1438 528 106 0 0 chrX 111878718 111878812 -54771484 + (TAGA)n Simple_repeat Simple_repeat 4 97 0 4 1438 2659 301 72 41 chrX 111878914 111880978 -54769318 + L1_Mur3 LINE L1 1594 3721 -2159 4 1438 537 288 74 55 chrX 111881007 111881316 -54768980 + Lx8 LINE L1 6296 6610 -863 4 1438 1407 134 188 7 chrX 111881319 111881611 -54768685 + IAPLTR4 LTR ERVK 1 345 0 4 1438 655 380 68 12 chrX 111881679 111882166 -54768130 + Lx8 LINE L1 6716 7229 -244 4 1438 26 64 0 0 chrX 111882268 111882315 -54767981 + AT_rich Low_complexity Low_complexity 1 47 0 4 1438 679 311 24 77 chrX 111882417 111882626 -54767670 + B3A SINE B2 1 198 0 4 1438 362 313 73 61 chrX 111882630 111882943 -54767353 + L1M5 LINE L1 2746 3062 -3084 4 1438 242 400 41 45 chrX 111883173 111883393 -54766903 + MT2A LTR ERVL 228 446 -87 4 1438 437 0 0 19 chrX 111883616 111883670 -54766626 + (CAAAA)n Simple_repeat Simple_repeat 3 55 0 4 1438 1102 287 65 10 chrX 111883814 111884120 -54766176 - MTEa LTR MaLR -1 378 56 4 1438 7615 44 5 0 chrX 111884144 111885073 -54765223 + L1Md_F3 LINE L1 5651 6584 0 4 1438 233 291 48 10 chrX 111885230 111885334 -54764962 + L1_Mm LINE L1 5688 5795 -88 4 1438 1418 342 123 61 chrX 111885349 111886590 -54763706 + MTE-int LTR MaLR 40 1231 -139 4 1438 1816 257 42 4 chrX 111887003 111887499 -54762797 + Lx9 LINE L1 7003 7517 -127 4 1438 205 0 0 155 chrX 111887500 111887648 -54762648 + (CTAAT)n Simple_repeat Simple_repeat 4 128 0 4 1438 560 168 73 7 chrX 111887650 111887800 -54762496 + Lx9 LINE L1 7478 7637 -7 4 1438 27 0 0 0 chrX 111887805 111887832 -54762464 + AT_rich Low_complexity Low_complexity 1 27 0 4 1438 35851 38 4 1 chrX 111888472 111893695 -54756601 + L1Md_T LINE L1 391 5586 -297 4 1438 8325 34 2 0 chrX 111893695 111894688 -54755608 + L1Md_T LINE L1 5587 6581 -1 4 1438 10568 84 5 12 chrX 111894909 111896410 -54753886 - L1_Mm LINE L1 -756 5127 3637 4 1438 1516 94 0 9 chrX 111896410 111896625 -54753671 + L1_Mus1 LINE L1 6354 6566 -1 4 1438 393 75 0 0 chrX 111897144 111897197 -54753099 + (TTA)n Simple_repeat Simple_repeat 2 54 0 4 1438 436 230 75 57 chrX 111897373 111897479 -54752817 - PB1D10 SINE Alu 0 117 10 4 1438 1429 45 0 0 chrX 111897542 111897718 -54752578 + L1Md_F2 LINE L1 6393 6568 -14 4 1438 26 0 0 0 chrX 111897763 111897789 -54752507 + AT_rich Low_complexity Low_complexity 1 26 0 4 1438 375 286 94 17 chrX 111897937 111898236 -54752060 + L1ME1 LINE L1 5628 5949 -230 4 1438 529 88 48 10 chrX 111898374 111898477 -54751819 + L1_Mur2 LINE L1 5204 5310 -567 4 1438 13092 106 15 25 chrX 111898465 111900911 -54749385 + L1VL4 LINE L1 548 2949 -610 4 1438 923 117 0 14 chrX 111900910 111901049 -54749247 + L1_Mus3 LINE L1 5649 5785 -851 4 1438 4524 62 3 5 chrX 111901050 111901630 -54748666 + L1Md_F2 LINE L1 5987 6565 -17 4 1438 4963 121 53 1 chrX 111901640 111902448 -54747848 + L1_Mus3 LINE L1 5785 6634 -4 4 1438 605 257 97 66 chrX 111902449 111902799 -54747497 + L1_Rod LINE L1 1717 2077 -3770 4 1438 3944 155 29 26 chrX 111902803 111903503 -54746793 - Lx2B LINE L1 -58 6942 6241 4 1438 2542 307 65 25 chrX 111903556 111903744 -54746552 + Lx9 LINE L1 6156 6337 -1307 5 1438 441 0 0 0 chrX 111903744 111903793 -54746503 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1438 2542 307 65 25 chrX 111903793 111904702 -54745594 + Lx9 LINE L1 6338 7295 -349 5 1438 1586 257 113 3 chrX 111904712 111905102 -54745194 - Lx7 LINE L1 -966 6730 6298 5 1438 374 299 47 37 chrX 111905102 111905293 -54745003 - L1_Rod LINE L1 -6549 623 431 5 1438 3508 59 26 2 chrX 111905293 111905753 -54744543 + L1_Mus2 LINE L1 6096 6566 0 5 1438 278 20 38 38 chrX 111905918 111905971 -54744325 + (CAAAA)n Simple_repeat Simple_repeat 3 55 0 5 1438 444 311 125 6 chrX 111907146 111907314 -54742982 + Lx6 LINE L1 6966 7153 -307 5 1438 5232 210 26 41 chrX 111907390 111908934 -54741362 - Lx4B LINE L1 -436 6622 5106 5 1438 332 311 15 69 chrX 111908921 111909052 -54741244 + Lx5 LINE L1 6763 6886 -164 5 1438 1138 155 63 0 chrX 111909081 111909288 -54741008 - Lx3_Mus LINE L1 -9 6972 6753 5 1438 9464 88 155 13 chrX 111909294 111911184 -54739112 - Lx3_Mus LINE L1 -839 6170 4007 5 1438 2149 80 9 3 chrX 111911185 111911500 -54738796 + Lx3_Mus LINE L1 3668 3984 -1902 5 1438 600 233 67 6 chrX 111911500 111911664 -54738632 + Lx6 LINE L1 7256 7429 -31 5 1438 1328 35 0 12 chrX 111911664 111911835 -54738461 + (TAGA)n Simple_repeat Simple_repeat 2 170 0 5 1438 279 54 0 0 chrX 111912083 111912120 -54738176 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 1438 3607 102 11 6 chrX 111912589 111913131 -54737165 - L1_Mus3 LINE L1 0 6638 6094 5 1438 1200 61 0 0 chrX 111913249 111913396 -54736900 + B1_Mus1 SINE Alu 2 148 0 5 1438 30 0 0 0 chrX 111913495 111913525 -54736771 + AT_rich Low_complexity Low_complexity 1 30 0 5 1438 520 64 0 0 chrX 111913525 111913603 -54736693 + L1Md_F2 LINE L1 6503 6580 -2 5 1438 791 314 37 22 chrX 111913791 111914061 -54736235 - Lx7 LINE L1 -1146 6550 6277 5 1438 1167 254 31 37 chrX 111914052 111914191 -54736105 - Lx7 LINE L1 -177 5703 5564 5 1438 1455 165 0 15 chrX 111914191 111914455 -54735841 - Lx LINE L1 -4 6650 6391 5 1438 1167 254 31 37 chrX 111914455 111914670 -54735626 - Lx7 LINE L1 -317 5563 5353 5 1438 3167 164 50 3 chrX 111914704 111915280 -54735016 - Lx2 LINE L1 -8 6989 6387 5 1438 387 41 0 0 chrX 111916465 111916514 -54733782 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1438 4977 148 4 12 chrX 111916883 111918025 -54732271 - Lx2 LINE L1 -596 6401 5271 5 1438 325 207 56 40 chrX 111918027 111918153 -54732143 - Lx7 LINE L1 -519 5361 5234 5 1438 937 222 24 38 chrX 111918220 111918254 -54732042 + MTC LTR MaLR 162 196 -225 5 1438 4487 93 122 13 chrX 111918254 111918964 -54731332 + L1_Mus3 LINE L1 5851 6638 0 5 1438 937 222 24 38 chrX 111918964 111919140 -54731156 + MTC LTR MaLR 197 369 -52 5 1438 237 267 17 0 chrX 111919158 111919218 -54731078 + Lx7 LINE L1 7248 7308 -388 5 1438 439 167 9 9 chrX 111919218 111919333 -54730963 + CT-rich Low_complexity Low_complexity 2 116 0 5 1438 321 26 0 0 chrX 111919354 111919392 -54730904 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1438 276 103 52 0 chrX 111919626 111919684 -54730612 + (TA)n Simple_repeat Simple_repeat 2 62 0 5 1438 494 346 92 34 chrX 111920017 111920511 -54729785 + MLT1E2 LTR MaLR 64 506 -118 5 1438 629 304 61 68 chrX 111921546 111921637 -54728659 + RMER15 LTR ERVL 139 229 -346 5 1438 2796 115 16 11 chrX 111921637 111922076 -54728220 + BGLII_B LTR ERVK 1 441 0 5 1438 629 304 61 68 chrX 111922076 111922277 -54728019 + RMER15 LTR ERVL 230 429 -146 5 1438 213 39 0 0 chrX 111923728 111923754 -54726542 + (A)n Simple_repeat Simple_repeat 1 26 0 5 1438 379 359 30 71 chrX 111923858 111924026 -54726270 + B3A SINE B2 4 164 -34 5 1438 291 54 0 0 chrX 111924031 111924068 -54726228 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1438 429 215 0 0 chrX 111924094 111924173 -54726123 - Lx7 LINE L1 -1277 6419 6341 5 1438 1280 214 76 19 chrX 111924207 111924574 -54725722 - Lx7 LINE L1 -1512 6184 5797 5 1438 24 0 0 0 chrX 111924587 111924611 -54725685 + AT_rich Low_complexity Low_complexity 1 24 0 5 1438 1136 224 63 166 chrX 111924611 111925273 -54725023 - Lx4B LINE L1 -1 6975 6441 5 1438 1987 205 56 46 chrX 111925280 111925781 -54724515 - Lx7 LINE L1 -96 5784 5279 5 1438 1585 189 9 55 chrX 111925786 111926362 -54723934 + L1VL4 LINE L1 1 635 -5667 5 1438 2792 104 95 0 chrX 111926358 111926800 -54723496 + Lx2 LINE L1 5788 6271 -726 5 1438 4625 199 88 43 chrX 111926790 111928118 -54722178 + Lx7 LINE L1 4596 5982 -1714 5 1438 287 231 48 53 chrX 111928111 111928251 -54722045 + L1M2c LINE L1 2013 2160 -4549 5 1438 3042 185 32 65 chrX 111928455 111929095 -54721201 + Lx5 LINE L1 2712 3359 -2521 5 1438 207 0 0 0 chrX 111929095 111929118 -54721178 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 5 1438 3042 185 32 65 chrX 111929118 111929317 -54720979 + Lx5 LINE L1 3360 3523 -2357 5 1438 1075 112 11 16 chrX 111929317 111929499 -54720797 - L1_Mus3 LINE L1 -4 6634 6454 5 1438 420 20 0 0 chrX 111929570 111929619 -54720677 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 5 1438 239 246 70 9 chrX 111929619 111929734 -54720562 - Lx5 LINE L1 -19 7031 6910 5 1438 365 197 0 14 chrX 111929733 111929805 -54720491 - Lx5 LINE L1 -295 6755 6685 5 1438 3132 226 30 129 chrX 111930432 111931979 -54718317 + Lx5 LINE L1 5301 7123 -337 5 1438 885 89 0 0 chrX 111931979 111932103 -54718193 + (TCTCC)n Simple_repeat Simple_repeat 5 128 0 5 1438 1505 293 113 128 chrX 111932103 111932221 -54718075 + Lx5 LINE L1 7124 7135 -325 5 1438 1044 67 0 29 chrX 111932221 111932391 -54717905 - Lx LINE L1 0 6654 6490 5 1438 1505 293 113 128 chrX 111932391 111932706 -54717590 + Lx5 LINE L1 7136 7451 -9 5 1438 3189 53 10 2 chrX 111932853 111933246 -54717050 + MTA_Mm LTR MaLR 1 396 0 5 1438 321 287 11 11 chrX 111933352 111933507 -54716789 + L1M2 LINE L1 2390 2455 -4394 5 1438 473 287 108 31 chrX 111933632 111933855 -54716441 + Lx9 LINE L1 7256 7495 -149 5 1438 29 0 0 0 chrX 111933862 111933891 -54716405 + AT_rich Low_complexity Low_complexity 1 29 0 5 1438 544 364 61 14 chrX 111934210 111934422 -54715874 + MLT1F1 LTR MaLR 18 239 -330 5 1438 1189 229 6 57 chrX 111934507 111934859 -54715437 + Lx2B LINE L1 6667 7000 0 5 1438 233 299 19 76 chrX 111934878 111934983 -54715313 + MLT1E1A LTR MaLR 572 670 -10 5 179 699 348 93 63 chrX 111935474 111936111 -54714185 + MER67B LTR ERV1 5 660 -1 5 1439 24 53 0 0 chrX 111937422 111937460 -54712836 + AT_rich Low_complexity Low_complexity 1 38 0 5 1439 2013 216 18 5 chrX 111938216 111938663 -54711633 + L1_Rod LINE L1 2025 2477 -3370 5 1439 230 57 0 125 chrX 111938693 111938733 -54711563 + U2 snRNA snRNA 1 35 -153 5 1439 275 195 47 35 chrX 111938736 111938821 -54711475 + L1_Rod LINE L1 2487 2572 -3275 5 1439 2521 113 3 3 chrX 111939152 111939535 -54710761 + L1_Mus4 LINE L1 6248 6630 -6 5 1439 1861 263 53 52 chrX 111939867 111940135 -54710161 - L1_Rod LINE L1 -1223 4624 4375 5 1439 405 0 0 0 chrX 111940135 111940180 -54710116 + (TTTTA)n Simple_repeat Simple_repeat 3 47 0 5 1439 1861 263 53 52 chrX 111940180 111940737 -54709559 - L1_Rod LINE L1 -1473 4374 3800 5 1439 1224 249 102 39 chrX 111940729 111941240 -54709056 + L1_Rod LINE L1 3105 3665 -2182 5 1439 186 43 0 0 chrX 111941240 111941263 -54709033 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1439 1224 249 102 39 chrX 111941263 111941391 -54708905 + L1_Rod LINE L1 3666 3784 -2063 5 1439 4031 100 21 8 chrX 111941417 111942031 -54708265 + Lx3_Mus LINE L1 6387 7008 -1 5 1439 36227 30 5 9 chrX 111942154 111947325 -54702971 + L1Md_A LINE L1 440 5586 -297 5 1439 8345 33 1 0 chrX 111947325 111948320 -54701976 + L1Md_A LINE L1 5587 6582 0 5 1439 1417 292 27 86 chrX 111948320 111948919 -54701377 + L1MA9 LINE L1 5571 6168 -3 5 1439 823 330 59 39 chrX 111949071 111949611 -54700685 + L1MC3 LINE L1 6416 6966 -819 5 1439 528 274 32 36 chrX 111949634 111949854 -54700442 + L1MC3 LINE L1 7263 7481 -304 5 1439 1432 308 43 56 chrX 111949880 111950326 -54699970 - Lx9 LINE L1 -871 6773 6328 5 1439 616 263 86 15 chrX 111950326 111950523 -54699773 + B3 SINE B2 1 211 -5 5 1439 1432 300 69 70 chrX 111950523 111950957 -54699339 - Lx9 LINE L1 -1317 6327 5785 5 1439 23 33 0 0 chrX 111950957 111950987 -54699309 + AT_rich Low_complexity Low_complexity 1 30 0 5 1439 897 226 24 19 chrX 111950991 111951199 -54699097 - B3 SINE B2 -5 211 3 5 1439 180 0 0 0 chrX 111951303 111951323 -54698973 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1439 2418 169 19 3 chrX 111951382 111951967 -54698329 + Lx4B LINE L1 5436 6035 -1023 5 1439 2019 233 52 21 chrX 111951970 111952491 -54697805 + Lx4B LINE L1 6498 7034 -24 5 1439 492 59 0 0 chrX 111952492 111952560 -54697736 + (CATA)n Simple_repeat Simple_repeat 1 68 0 5 1439 360 176 0 0 chrX 111952910 111952978 -54697318 + (TA)n Simple_repeat Simple_repeat 1 68 0 5 1439 37 93 0 0 chrX 111953020 111953127 -54697169 + AT_rich Low_complexity Low_complexity 1 107 0 5 1439 1561 93 34 0 chrX 111954320 111954557 -54695739 + L1_Mur2 LINE L1 2659 2903 -2974 5 1439 7793 166 23 5 chrX 111954555 111955882 -54694414 + Lx4A LINE L1 5705 7055 -3 5 1439 1614 220 44 42 chrX 111955894 111956254 -54694042 + MTC LTR MaLR 53 413 -8 5 1439 300 308 15 0 chrX 111956490 111956623 -54693673 + L1_Mur3 LINE L1 4029 4163 -1717 5 1439 1722 50 0 0 chrX 111956624 111956843 -54693453 - MTB LTR MaLR 0 400 182 5 1439 1944 92 35 3 chrX 111956856 111957138 -54693158 - L1_Mus3 LINE L1 -8 6630 6340 5 1439 2267 76 41 3 chrX 111957149 111957465 -54692831 + L1_Mus3 LINE L1 5993 6320 -318 5 1439 1306 94 25 25 chrX 111957465 111957661 -54692635 - MTB LTR MaLR -204 196 1 5 1439 816 267 124 32 chrX 111957784 111958307 -54691989 + L1M2 LINE L1 4367 4937 -1206 5 1439 393 281 47 107 chrX 111958428 111958643 -54691653 + RLTR25B LTR ERVK 1 202 -826 5 1439 276 313 65 53 chrX 111959489 111959658 -54690638 + RLTR25B LTR ERVK 858 1028 0 5 1439 675 318 73 28 chrX 111959662 111960440 -54689856 + L1M2 LINE L1 5032 5846 -1 5 1439 872 305 127 28 chrX 111960477 111960943 -54689353 - Lx8 LINE L1 -40 7433 6922 5 1439 1986 180 30 5 chrX 111961272 111961640 -54688656 + RLTR14 LTR ERV1 3 379 -3 5 1439 25521 143 18 23 chrX 111961693 111966645 -54683651 - L1VL4 LINE L1 -275 5608 693 5 1439 25 31 0 0 chrX 111967262 111967294 -54683002 + AT_rich Low_complexity Low_complexity 1 32 0 5 1439 431 282 64 52 chrX 111967336 111967688 -54682608 - L1M4c LINE L1 -3675 2704 2345 5 1439 317 56 56 0 chrX 111968086 111968140 -54682156 + (TTTTTG)n Simple_repeat Simple_repeat 4 60 0 5 1439 227 289 41 16 chrX 111968243 111968366 -54681930 - L1M4c LINE L1 -4546 1767 1642 5 1439 1205 268 80 17 chrX 111968451 111968801 -54681495 - ORR1D1 LTR MaLR -2 419 1 5 1439 510 17 0 0 chrX 111969104 111969163 -54681133 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 5 1439 259 333 37 9 chrX 111969442 111969551 -54680745 + MIRc SINE MIR 42 153 -115 5 1439 351 0 0 0 chrX 111969593 111969632 -54680664 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 1439 5474 132 45 9 chrX 111969632 111970973 -54679323 - L1_Mus4 LINE L1 -52 6584 5184 5 1439 252 120 0 0 chrX 111972640 111972690 -54677606 + (A)n Simple_repeat Simple_repeat 1 50 0 5 1439 183 100 0 0 chrX 111972737 111972767 -54677529 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1439 183 100 0 0 chrX 111972870 111972900 -54677396 + (TA)n Simple_repeat Simple_repeat 1 30 0 5 1439 216 362 0 28 chrX 111973740 111973811 -54676485 - PB1D10 SINE Alu -6 111 43 5 1439 4923 238 56 12 chrX 111974338 111975648 -54674648 + Lx2B LINE L1 5634 7000 0 5 1439 34 24 0 0 chrX 111975695 111975736 -54674560 + AT_rich Low_complexity Low_complexity 1 41 0 5 1439 441 261 108 0 chrX 111976186 111976297 -54673999 - ID_B1 SINE B4 0 224 102 5 1439 25 31 0 0 chrX 111976911 111976943 -54673353 + AT_rich Low_complexity Low_complexity 1 32 0 5 1439 222 384 94 6 chrX 111977576 111977736 -54672560 + MIR SINE MIR 37 210 -52 6 1439 12445 167 43 10 chrX 111978692 111981693 -54668603 - Lx5 LINE L1 -2 6998 3849 6 1439 657 151 0 0 chrX 111981691 111981797 -54668499 - Lx5 LINE L1 -3564 2313 2208 6 1439 343 265 9 67 chrX 111981818 111981923 -54668373 + RLTR23 LTR ERV1 6 104 -326 6 1439 199 54 54 0 chrX 111982111 111982148 -54668148 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 1439 726 245 36 47 chrX 111982153 111982346 -54667950 + RLTR23 LTR ERV1 240 430 0 6 1439 335 367 60 62 chrX 111984119 111984587 -54665709 + RLTR4_MM-int LTR ERV1 1403 1869 -5909 6 1439 736 336 77 70 chrX 111984825 111985855 -54664441 + RLTR4_MM-int LTR ERV1 1967 3003 -4598 6 1439 697 46 0 27 chrX 111985886 111985998 -54664298 + L1Md_F3 LINE L1 6476 6584 0 6 1439 35343 43 0 0 chrX 111986303 111990751 -54659545 + L1Md_T LINE L1 1140 5586 -297 6 1439 8365 37 0 0 chrX 111990751 111991747 -54658549 + L1Md_T LINE L1 5587 6582 0 6 1439 1041 345 82 71 chrX 111991757 111992852 -54657444 + RLTR4_MM-int LTR ERV1 1938 3029 -2034 6 1439 186 43 0 0 chrX 111992852 111992875 -54657421 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1439 1074 301 56 47 chrX 111992875 111993851 -54656445 + RLTR4_MM-int LTR ERV1 4889 5203 -2398 6 1439 1907 151 22 0 chrX 111994004 111994316 -54655980 + ORR1A2 LTR MaLR 1 319 -8 6 1439 2897 40 0 0 chrX 111994664 111995010 -54655286 + ORR1A0 LTR MaLR 1 346 0 6 1439 252 0 0 0 chrX 111995401 111995429 -54654867 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 6 1439 4098 196 51 40 chrX 111995871 111997034 -54653262 + RMER12 LTR ERVK 1 1813 -35 6 1439 2141 125 0 6 chrX 111997315 111997630 -54652666 - L1_Mm LINE L1 -118 5765 5453 6 1439 192 40 0 0 chrX 111997631 111997656 -54652640 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 6 1439 850 256 103 42 chrX 111997694 111998142 -54652154 + RLTR19-int LTR ERVK 2063 2537 -3600 6 1439 3385 174 56 14 chrX 111998133 111998773 -54651523 + RLTR19-int LTR ERVK 3701 4367 -1770 6 1439 1134 84 0 0 chrX 111999194 111999336 -54650960 + B1_Mus1 SINE Alu 1 142 -6 6 1439 3185 179 16 11 chrX 111999365 111999992 -54650304 + L1_Mur2 LINE L1 4372 5001 -876 6 1439 2558 214 10 8 chrX 112000000 112000617 -54649679 + Lx5 LINE L1 5010 5627 -250 1 1439 1143 192 34 4 chrX 112000625 112000891 -54649405 + Lx5 LINE L1 5734 6007 -1043 1 1439 2336 184 107 123 chrX 112000891 112001515 -54648781 + RMER6C LTR ERVK 1 608 -82 2 1439 2088 29 0 0 chrX 112001515 112001760 -54648536 + L1Md_F3 LINE L1 6326 6570 -14 3 1439 2336 184 107 123 chrX 112001760 112001836 -54648460 + RMER6C LTR ERVK 609 689 -1 2 1439 3507 264 44 11 chrX 112001837 112002846 -54647450 + Lx5 LINE L1 6004 7045 -5 1 1439 780 294 21 125 chrX 112002863 112003151 -54647145 + RMER15 LTR ERVL 170 427 -148 4 1439 1993 132 25 10 chrX 112003151 112003465 -54646831 + ORR1A2 LTR MaLR 1 319 -8 5 1439 834 105 11 3 chrX 112003477 112003613 -54646683 - B2_Mm1t SINE B2 -3 192 56 6 1439 2169 105 12 38 chrX 112003613 112003959 -54646337 - IAPLTR1a_Mm LTR ERVK 0 337 1 7 1439 6091 56 30 11 chrX 112003965 112004795 -54645501 - IAPEz-int LTR ERVK -6 6475 5630 8 1439 22948 44 25 14 chrX 112004781 112007785 -54642511 - IAPEz-int LTR ERVK -3405 3076 41 8 1439 286 216 26 39 chrX 112007785 112007801 -54642495 - B3A SINE B2 -122 76 62 9 1439 2169 105 12 38 chrX 112007801 112008147 -54642149 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 1439 397 100 17 0 chrX 112008147 112008207 -54642089 - B2_Mm2 SINE B2 -134 61 1 1 1439 1036 93 7 0 chrX 112008222 112008372 -54641924 - L1_Mus2 LINE L1 0 6566 6416 1 1439 364 269 101 54 chrX 112008397 112008438 -54641858 + RMER15 LTR ERVL 420 456 -119 4 1439 1003 97 0 0 chrX 112008438 112008572 -54641724 + B1_Mus2 SINE Alu 2 135 -12 1 1439 261 0 0 0 chrX 112008573 112008602 -54641694 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1439 364 269 101 54 chrX 112008602 112008707 -54641589 + RMER15 LTR ERVL 457 575 0 4 1439 5502 149 44 12 chrX 112009982 112010957 -54639339 + MERVL_2A-int LTR ERVL 4621 5626 -135 1 1439 263 206 12 88 chrX 112010959 112011039 -54639257 + ORR1A3-int LTR MaLR 567 640 -1323 1 1439 3625 114 50 5 chrX 112011080 112011634 -54638662 + MT2B2 LTR ERVL 6 584 0 1 1439 314 356 15 29 chrX 112011639 112011775 -54638521 - MIR SINE MIR -97 171 31 1 1439 1826 311 97 10 chrX 112012151 112012872 -54637424 + Lx8 LINE L1 6688 7471 -2 1 1439 2207 310 95 24 chrX 112012848 112014074 -54636222 + Lx8 LINE L1 6156 7468 -5 1 1439 6300 79 10 5 chrX 112014811 112015676 -54634620 + L1Md_F2 LINE L1 5706 6575 -7 2 1439 731 320 74 14 chrX 112015863 112016148 -54634148 + MTD LTR MaLR 104 405 -14 2 1439 415 269 106 0 chrX 112016252 112016356 -54633940 + B3A SINE B2 1 115 -83 2 1439 377 39 20 0 chrX 112016364 112016415 -54633881 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 1439 23 0 0 0 chrX 112016881 112016904 -54633392 + AT_rich Low_complexity Low_complexity 1 23 0 2 1439 526 251 100 131 chrX 112016906 112017295 -54633001 - RMER17C LTR ERVK -32 378 2 2 1439 1227 51 6 0 chrX 112017767 112017925 -54632371 + B2_Mm1t SINE B2 2 160 -33 2 1439 207 0 0 0 chrX 112017925 112017948 -54632348 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 2 1439 697 244 112 11 chrX 112017948 112017967 -54632329 + B3A SINE B2 178 196 -2 2 1439 663 48 0 0 chrX 112018819 112018902 -54631394 + (TC)n Simple_repeat Simple_repeat 1 83 0 2 1439 573 88 104 74 chrX 112021013 112021148 -54629148 - L1Md_F2 LINE L1 0 6582 6444 2 1439 581 76 11 0 chrX 112021389 112021481 -54628815 + (TC)n Simple_repeat Simple_repeat 1 93 0 3 1439 2630 78 0 3 chrX 112022260 112022605 -54627691 + ORR1A1 LTR MaLR 3 346 0 3 1439 288 0 0 0 chrX 112022681 112022713 -54627583 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 1439 2333 79 3 6 chrX 112022716 112023048 -54627248 - ORR1A1-int LTR MaLR -1461 331 1 3 1439 1767 63 165 71 chrX 112023052 112023361 -54626935 - ORR1A1 LTR MaLR -8 338 1 3 1439 200 97 32 0 chrX 112024025 112024056 -54626240 + (GAGAA)n Simple_repeat Simple_repeat 4 35 0 3 1439 266 349 30 25 chrX 112024056 112024226 -54626070 - MLT2D LTR ERVL -197 267 99 3 1439 241 250 25 0 chrX 112024260 112024340 -54625956 + Lx8 LINE L1 7392 7473 0 3 1439 1281 78 11 0 chrX 112024858 112025037 -54625259 - B2_Mm1t SINE B2 -4 189 9 3 1439 475 286 34 0 chrX 112025038 112025185 -54625111 + RMER15 LTR ERVL 406 557 -18 3 1439 1197 236 36 48 chrX 112025506 112025840 -54624456 - RMER5 LTR ERV1 -39 495 166 3 1439 715 285 29 14 chrX 112025817 112026027 -54624269 - RMER5 LTR ERV1 -309 225 13 3 1439 204 40 0 0 chrX 112026187 112026212 -54624084 + (TC)n Simple_repeat Simple_repeat 2 26 0 4 1439 1108 68 0 52 chrX 112026229 112026384 -54623912 - B1_Mus2 SINE Alu 0 147 1 4 1439 1365 51 0 0 chrX 112026406 112026584 -54623712 - L1Md_F3 LINE L1 -1 6583 6406 4 1439 1785 324 61 15 chrX 112026588 112026723 -54623573 - ERVL-int LTR ERVL -433 5324 5190 4 1439 225 0 0 0 chrX 112026723 112026748 -54623548 + (TATG)n Simple_repeat Simple_repeat 2 26 0 4 1439 1785 333 108 15 chrX 112026748 112027883 -54622413 - ERVL-int LTR ERVL -568 5189 3942 4 1439 530 228 36 42 chrX 112028777 112028942 -54621354 - RLTR43A LTR ERVK 0 364 201 4 1439 343 295 84 0 chrX 112029235 112029330 -54620966 - ID_B1 SINE B4 -35 189 87 4 1439 404 247 153 36 chrX 112029423 112029555 -54620741 - B1_Mur1 SINE Alu -2 147 1 4 1439 1281 72 83 0 chrX 112029748 112029928 -54620368 - L1Md_F2 LINE L1 -12 6570 6376 4 1439 665 313 30 0 chrX 112029987 112030188 -54620108 + MER76 LTR ERVL 1 207 -484 4 1439 505 252 14 14 chrX 112030215 112030360 -54619936 - L1_Rod LINE L1 -1405 4442 4298 5 1439 2506 211 75 27 chrX 112030393 112031162 -54619134 - L1_Rod LINE L1 -3701 2146 1341 5 1439 2179 206 19 25 chrX 112031150 112031589 -54618707 - Lx5 LINE L1 -303 6747 6304 5 1439 2625 72 108 3 chrX 112031589 112031949 -54618347 - MTB LTR MaLR 0 400 3 5 1439 2179 206 19 25 chrX 112031949 112031991 -54618305 - Lx5 LINE L1 -747 6303 6269 5 1439 863 216 67 22 chrX 112031982 112032205 -54618091 + Lx5 LINE L1 6799 7031 -19 5 1439 405 0 0 0 chrX 112032205 112032250 -54618046 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 5 1439 604 203 46 0 chrX 112032269 112032388 -54617908 - L1_Rod LINE L1 -6294 1314 1189 5 1439 243 0 0 0 chrX 112032388 112032415 -54617881 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1439 604 203 46 0 chrX 112032415 112032448 -54617848 - L1_Rod LINE L1 -6420 1188 1156 5 1439 1251 273 50 49 chrX 112032515 112033109 -54617187 - L1_Mur3 LINE L1 -89 5791 5197 5 1439 3319 79 5 0 chrX 112033109 112033762 -54616534 + L1_Mus2 LINE L1 5381 6036 -530 5 1439 1815 275 58 73 chrX 112033768 112034787 -54615509 - L1_Mur3 LINE L1 -751 5129 4126 5 1439 2010 110 113 6 chrX 112034833 112035152 -54615144 - Lx3_Mus LINE L1 0 7009 6657 5 1439 4945 70 15 15 chrX 112035147 112035805 -54614491 + L1Md_F2 LINE L1 5914 6571 -11 5 1439 4016 106 14 0 chrX 112035827 112036449 -54613847 - Lx3_Mus LINE L1 -361 6648 6018 5 1439 4412 115 2 73 chrX 112036447 112037689 -54612607 + Lx3A LINE L1 4940 6017 -964 6 1439 323 45 0 22 chrX 112037744 112037790 -54612506 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 6 1439 326 290 0 0 chrX 112037806 112037875 -54612421 - RSINE1 SINE B4 -19 146 78 6 1439 338 335 43 49 chrX 112038183 112038368 -54611928 - RLTR14 LTR ERV1 -1 381 198 6 1439 277 204 0 0 chrX 112038680 112038734 -54611562 - RLTR14-int LTR ERV1 -20 5297 5244 6 1439 227 341 5 59 chrX 112038887 112039074 -54611222 + CT-rich Low_complexity Low_complexity 3 179 0 6 1439 669 58 0 0 chrX 112039358 112039444 -54610852 + (GA)n Simple_repeat Simple_repeat 1 86 0 6 1439 549 0 0 0 chrX 112039869 112039930 -54610366 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 6 1439 471 207 46 12 chrX 112040266 112040398 -54609898 + MTA_Mm LTR MaLR 271 407 0 6 1439 344 261 39 104 chrX 112040725 112040956 -54609340 - RLTR14-int LTR ERV1 -4868 449 234 6 1439 1081 106 0 48 chrX 112041176 112041364 -54608932 - L1Md_F2 LINE L1 0 6582 6404 6 1439 594 41 0 0 chrX 112042564 112042637 -54607659 + (TA)n Simple_repeat Simple_repeat 1 73 0 6 1439 2417 197 31 55 chrX 112044482 112044663 -54605633 + L1_Mur3 LINE L1 2467 2651 -3229 7 1439 414 0 0 0 chrX 112044663 112044709 -54605587 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1439 2417 197 31 55 chrX 112044709 112045177 -54605119 + L1_Mur3 LINE L1 2652 3099 -2781 7 1439 244 99 27 40 chrX 112045229 112045303 -54604993 + T-rich Low_complexity Low_complexity 3 75 0 7 1439 668 179 13 66 chrX 112045309 112045536 -54604760 + Lx7 LINE L1 7360 7574 -122 7 1439 180 0 0 0 chrX 112045536 112045556 -54604740 + (T)n Simple_repeat Simple_repeat 1 20 0 7 1439 1053 24 0 0 chrX 112045556 112045683 -54604613 - B1_Mus1 SINE Alu 0 148 22 7 1439 1063 75 7 39 chrX 112046129 112046282 -54604014 + B1_Mus1 SINE Alu 1 148 0 7 1439 26 50 0 0 chrX 112046308 112046348 -54603948 + AT_rich Low_complexity Low_complexity 1 40 0 7 1439 25 51 0 0 chrX 112046430 112046469 -54603827 + AT_rich Low_complexity Low_complexity 1 39 0 7 1439 493 292 9 0 chrX 112046487 112046600 -54603696 + B1_Mus1 SINE Alu 14 127 -21 7 1439 1636 247 141 43 chrX 112046626 112047350 -54602946 - Lx7 LINE L1 -7 7689 6895 8 1439 23 68 0 0 chrX 112047553 112047597 -54602699 + AT_rich Low_complexity Low_complexity 1 44 0 8 1439 27 0 0 0 chrX 112047674 112047701 -54602595 + AT_rich Low_complexity Low_complexity 1 27 0 8 1439 347 200 47 0 chrX 112047749 112047834 -54602462 + Lx9 LINE L1 7186 7274 -370 8 1439 2059 197 21 5 chrX 112047845 112048232 -54602064 - MTC LTR MaLR -28 393 1 8 1439 1080 203 125 0 chrX 112048265 112048440 -54601856 + Lx9 LINE L1 7302 7481 -163 8 1439 215 103 0 25 chrX 112048440 112048480 -54601816 + (TATG)n Simple_repeat Simple_repeat 2 40 0 8 1439 1080 203 125 0 chrX 112048480 112048609 -54601687 + Lx9 LINE L1 7482 7643 -1 8 1439 42 36 0 0 chrX 112048787 112048843 -54601453 + AT_rich Low_complexity Low_complexity 1 56 0 8 1439 381 223 9 26 chrX 112048897 112049012 -54601284 - Lx7 LINE L1 0 7696 7584 8 1439 279 351 50 34 chrX 112049089 112049328 -54600968 + L1_Mur2 LINE L1 692 934 -6152 8 1439 4785 148 30 8 chrX 112049331 112050195 -54600101 + Lx2A LINE L1 6086 6968 -40 8 1439 352 118 0 76 chrX 112050195 112050287 -54600009 + Lx2A LINE L1 6924 7008 0 9 1439 727 214 5 11 chrX 112050287 112050471 -54599825 + L1_Mur2 LINE L1 942 1124 -5962 8 1439 1202 47 14 0 chrX 112050471 112050619 -54599677 + B1_Mur4 SINE Alu 1 150 0 9 1439 3281 178 28 76 chrX 112050629 112051388 -54598908 + L1_Mur2 LINE L1 1084 1831 -4046 8 1439 1134 141 5 5 chrX 112051388 112051573 -54598723 + B2_Mm2 SINE B2 1 185 -10 9 1439 3281 175 29 87 chrX 112051573 112051616 -54598680 + L1_Mur2 LINE L1 1832 1873 -4004 8 1439 1262 34 0 0 chrX 112051616 112051762 -54598534 + B1_Mm SINE Alu 1 146 -1 9 1439 3281 175 29 87 chrX 112051762 112051994 -54598302 + L1_Mur2 LINE L1 1874 2055 -3822 8 1439 651 94 0 0 chrX 112051994 112052090 -54598206 + (CA)n Simple_repeat Simple_repeat 1 96 0 9 1439 3281 175 29 87 chrX 112052090 112052139 -54598157 + L1_Mur2 LINE L1 2056 2116 -3761 8 1439 465 275 36 36 chrX 112052211 112052407 -54597889 - L1MC3 LINE L1 -331 7454 7259 9 1439 314 299 25 85 chrX 112052441 112052642 -54597654 - L1MC3 LINE L1 -834 6951 6763 9 1439 2486 206 31 31 chrX 112052681 112053333 -54596963 - L1_Mur3 LINE L1 -3071 2809 2158 9 1439 259 235 0 34 chrX 112053334 112053422 -54596874 + T-rich Low_complexity Low_complexity 6 90 0 9 1439 1423 225 60 0 chrX 112053422 112053822 -54596474 - L1_Mur3 LINE L1 -3937 1943 1520 9 1439 1058 195 94 9 chrX 112053826 112054059 -54596237 - RLTR11A LTR ERVK 0 528 276 9 1439 1167 61 0 26 chrX 112054075 112054226 -54596070 - B1_Mus1 SINE Alu -1 147 1 9 1439 399 207 22 22 chrX 112054263 112054352 -54595944 - RLTR11A LTR ERVK -439 89 1 9 1439 1405 190 15 3 chrX 112054355 112054717 -54595579 - L1_Mur3 LINE L1 -4362 1518 1149 9 1439 1317 200 50 75 chrX 112054748 112055067 -54595229 - Lx5 LINE L1 -3 7047 6737 1 1439 2990 18 0 0 chrX 112055081 112055418 -54594878 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 1439 18754 12 3 0 chrX 112055418 112057504 -54592792 - IAPEz-int LTR ERVK 0 6481 4389 1 1439 831 189 200 0 chrX 112057624 112057799 -54592497 - B3 SINE B2 -4 212 3 1 1439 534 31 0 0 chrX 112058245 112058309 -54591987 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 1439 267 31 0 0 chrX 112058309 112058340 -54591956 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1439 410 256 39 8 chrX 112058798 112058928 -54591368 + L1MB7 LINE L1 5985 6118 -66 1 1439 357 299 57 28 chrX 112059415 112059556 -54590740 - MER31A LTR ERV1 -100 385 241 1 1439 269 356 32 41 chrX 112059553 112059676 -54590620 + ORR1E LTR MaLR 11 132 -227 1 1439 263 271 126 23 chrX 112059814 112059901 -54590395 - MTD LTR MaLR -323 96 1 1 1439 25 31 0 0 chrX 112060282 112060314 -54589982 + AT_rich Low_complexity Low_complexity 1 32 0 1 1439 204 143 0 23 chrX 112060879 112060922 -54589374 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 1 1439 27 0 0 0 chrX 112061156 112061183 -54589113 + AT_rich Low_complexity Low_complexity 1 27 0 1 1439 1667 236 51 13 chrX 112061295 112061686 -54588610 + MTD LTR MaLR 1 406 -13 1 1439 387 0 0 0 chrX 112061810 112061853 -54588443 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1439 198 143 0 0 chrX 112062093 112062128 -54588168 + (ATGGTG)n Simple_repeat Simple_repeat 1 35 0 1 1439 561 269 43 4 chrX 112064325 112064528 -54585768 - L1MA4 LINE L1 -424 5876 5644 1 1439 618 14 0 0 chrX 112064538 112064609 -54585687 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 1 1439 1031 55 0 0 chrX 112064907 112065035 -54585261 - B1_Mm SINE Alu -19 128 1 1 1439 448 337 91 12 chrX 112065147 112065312 -54584984 + MTD LTR MaLR 35 212 -207 1 1439 309 289 157 0 chrX 112065301 112065384 -54584912 + RSINE1 SINE B4 5 100 -65 1 1439 4295 118 42 8 chrX 112065384 112066033 -54584263 + Lx LINE L1 5984 6654 0 1 1439 271 245 0 0 chrX 112066355 112066408 -54583888 - Lx6 LINE L1 -1009 6635 6583 1 179 882 237 82 10 chrX 112066508 112066858 -54583438 - Lx6 LINE L1 -1013 5984 5570 1 1440 237 319 75 29 chrX 112066855 112067029 -54583267 + L1MB2 LINE L1 5935 6116 -55 1 1440 300 83 0 0 chrX 112068286 112068334 -54581962 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1440 702 281 12 12 chrX 112068536 112068702 -54581594 + B3 SINE B2 5 170 -46 1 1440 846 269 156 35 chrX 112068676 112069042 -54581254 + RMER16 LTR ERVK 62 471 -62 1 1440 447 19 0 0 chrX 112069043 112069095 -54581201 + (TTTTC)n Simple_repeat Simple_repeat 2 53 0 1 1440 1128 82 0 0 chrX 112070479 112070625 -54579671 - B1_Mus2 SINE Alu -1 146 1 1 1440 1127 132 11 6 chrX 112071467 112071650 -54578646 + B2_Mm1t SINE B2 1 184 -9 1 1440 22 35 0 0 chrX 112071650 112071679 -54578617 + AT_rich Low_complexity Low_complexity 1 29 0 1 1440 996 90 14 0 chrX 112071859 112072004 -54578292 - B1_Mus1 SINE Alu 0 148 2 1 1440 792 132 70 26 chrX 112072015 112072171 -54578125 - RMER1C Other Other -2 1340 1178 1 1440 21 36 0 0 chrX 112072559 112072587 -54577709 + AT_rich Low_complexity Low_complexity 1 28 0 1 1440 23 0 0 0 chrX 112073030 112073053 -54577243 + AT_rich Low_complexity Low_complexity 1 23 0 1 1440 664 323 22 0 chrX 112073768 112073991 -54576305 + Lx9 LINE L1 6722 6949 -695 1 1440 1429 204 87 26 chrX 112073992 112074304 -54575992 + MTC LTR MaLR 1 331 -90 1 1440 560 330 63 44 chrX 112074380 112074745 -54575551 + Lx9 LINE L1 6955 7326 -318 1 1440 341 158 0 0 chrX 112075037 112075094 -54575202 - Lx9 LINE L1 -212 7432 7376 1 1440 393 22 0 0 chrX 112075116 112075162 -54575134 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1440 323 204 43 0 chrX 112075162 112075255 -54575041 + Lx9 LINE L1 7523 7619 -25 1 1440 29 90 0 0 chrX 112075259 112075337 -54574959 + AT_rich Low_complexity Low_complexity 1 78 0 1 1440 287 49 0 24 chrX 112076119 112076161 -54574135 + (CATA)n Simple_repeat Simple_repeat 2 42 0 1 1440 476 340 102 58 chrX 112076166 112076510 -54573786 - ORR1E LTR MaLR 0 359 1 1 1440 1319 322 2 48 chrX 112076510 112076831 -54573465 - ORR1E-int LTR MaLR -419 1161 849 1 1440 562 157 100 269 chrX 112076831 112076969 -54573327 - URR1A DNA MER1_type 0 226 139 1 1440 1110 78 0 0 chrX 112076969 112077111 -54573185 - B1_Mus2 SINE Alu -5 142 1 1 1440 562 157 100 269 chrX 112077111 112077243 -54573053 - URR1A DNA MER1_type -88 138 2 1 1440 1319 322 2 48 chrX 112077243 112077381 -54572915 - ORR1E-int LTR MaLR -732 848 723 1 1440 1107 335 46 7 chrX 112077417 112077853 -54572443 - ORR1E-int LTR MaLR -1127 453 1 1 1440 453 349 84 31 chrX 112077858 112078195 -54572101 - ORR1E LTR MaLR -4 375 1 1 1440 1039 78 35 0 chrX 112080349 112080490 -54569806 + B1_Mus1 SINE Alu 3 148 0 1 1440 561 68 0 0 chrX 112080499 112080573 -54569723 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 1 1440 893 81 81 0 chrX 112080606 112080730 -54569566 - B1_Mus1 SINE Alu -14 134 1 1 1440 478 307 24 32 chrX 112080824 112081070 -54569226 - L1M3 LINE L1 -1114 5026 4783 1 1440 569 295 24 48 chrX 112081086 112081378 -54568918 - L1M3 LINE L1 -2229 3911 3627 1 1440 1044 300 30 2 chrX 112081506 112081970 -54568326 - L1MCa LINE L1 -3272 3049 2573 1 1440 596 307 62 16 chrX 112082048 112082213 -54568083 - L1MCa LINE L1 -6180 328 154 1 1440 5968 108 10 9 chrX 112082213 112083079 -54567217 - Lx2 LINE L1 -1 6996 6130 1 1440 596 307 62 16 chrX 112083079 112083171 -54567125 - L1MCa LINE L1 -6355 153 59 1 1440 567 0 0 0 chrX 112083287 112083350 -54566946 + (TTCTC)n Simple_repeat Simple_repeat 1 63 0 1 1440 615 282 29 15 chrX 112083469 112083674 -54566622 - ID_B1 SINE B4 -14 210 3 1 1440 264 293 70 39 chrX 112083874 112083885 -54566411 - L1M4 LINE L1 -5578 964 957 1 1440 456 19 0 0 chrX 112083885 112083938 -54566358 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1440 264 293 70 39 chrX 112083938 112084082 -54566214 - L1M4 LINE L1 -5586 956 804 1 1440 676 254 11 58 chrX 112084103 112084291 -54566005 - B3A SINE B2 0 198 20 1 1440 263 250 88 0 chrX 112084292 112084360 -54565936 - L1M4 LINE L1 -5723 819 746 1 1440 22 35 0 0 chrX 112084488 112084517 -54565779 + AT_rich Low_complexity Low_complexity 1 29 0 1 1440 468 0 0 0 chrX 112084522 112084574 -54565722 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1440 976 60 67 0 chrX 112084584 112084718 -54565578 - B2_Mm2 SINE B2 -51 144 2 1 1440 542 369 62 22 chrX 112084852 112085306 -54564990 - L1M4 LINE L1 -6060 482 11 1 1440 1008 95 0 21 chrX 112085604 112085744 -54564552 + B1_Mus2 SINE Alu 1 137 -10 1 1440 649 339 0 30 chrX 112085903 112086104 -54564192 - B3A SINE B2 -1 197 3 1 1440 938 58 0 0 chrX 112086807 112086928 -54563368 + B1_Mm SINE Alu 27 147 0 1 1440 797 274 40 95 chrX 112086996 112087404 -54562892 - RMER15 LTR ERVL -69 506 1 1 1440 994 85 42 7 chrX 112087668 112087810 -54562486 + B1_Mm SINE Alu 1 147 0 1 1440 198 136 0 0 chrX 112087810 112087854 -54562442 + (A)n Simple_repeat Simple_repeat 1 44 0 1 1440 1969 228 71 4 chrX 112087860 112088322 -54561974 + Lx7 LINE L1 6139 6631 -1065 1 1440 3443 203 66 37 chrX 112088323 112089310 -54560986 - RLTR25A LTR ERVK 0 1103 1 1 1440 758 252 79 19 chrX 112089342 112089556 -54560740 + Lx7 LINE L1 6679 6905 -791 1 1440 22 0 0 0 chrX 112089779 112089801 -54560495 + AT_rich Low_complexity Low_complexity 1 22 0 1 1440 540 255 148 6 chrX 112089846 112090008 -54560288 + B3 SINE B2 11 195 -21 1 1440 1546 261 84 90 chrX 112090010 112090145 -54560151 + Lx9 LINE L1 6526 6665 -979 1 1440 333 0 0 0 chrX 112090145 112090182 -54560114 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1 1440 243 61 0 0 chrX 112090182 112090215 -54560081 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1440 988 128 0 0 chrX 112090215 112090356 -54559940 - B1_Mm SINE Alu -6 141 1 1 1440 1546 261 84 90 chrX 112090356 112090504 -54559792 + Lx9 LINE L1 6666 6816 -828 1 1440 1594 36 0 5 chrX 112090504 112090697 -54559599 - B2_Mm1a SINE B2 0 193 2 1 1440 1546 261 84 90 chrX 112090697 112090993 -54559303 + Lx9 LINE L1 6817 7094 -550 1 1440 822 129 64 14 chrX 112090993 112091134 -54559162 - B1_Mus1 SINE Alu 0 148 1 1 1440 1546 261 84 90 chrX 112091134 112091219 -54559077 + Lx9 LINE L1 7095 7188 -456 1 1440 1793 151 0 7 chrX 112091216 112091502 -54558794 + Lx4A LINE L1 6106 6389 -669 1 1440 2837 77 8 2 chrX 112091501 112091893 -54558403 + L1_Mus2 LINE L1 5586 5950 -616 1 1440 5544 92 8 15 chrX 112091900 112091985 -54558311 - L1VL2 LINE L1 -1850 1848 1766 1 1440 3343 74 19 82 chrX 112091985 112092499 -54557797 + RLTR45 LTR ERVK 1 482 0 1 1440 5544 92 8 15 chrX 112092499 112092760 -54557536 - L1VL2 LINE L1 -1933 1765 1505 1 1440 705 24 0 0 chrX 112092760 112092843 -54557453 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 1 1440 954 95 0 42 chrX 112092843 112092986 -54557310 - B1_Mus1 SINE Alu -10 138 2 1 1440 5544 96 122 13 chrX 112092986 112094207 -54556089 - L1VL2 LINE L1 -2194 1504 132 1 1440 243 0 0 0 chrX 112095060 112095087 -54555209 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1440 222 37 0 0 chrX 112096200 112096227 -54554069 + (CAA)n Simple_repeat Simple_repeat 3 29 0 1 1440 263 261 65 0 chrX 112096275 112096367 -54553929 + MER46C DNA MER2_type 73 170 -168 1 1440 671 225 137 6 chrX 112097019 112097180 -54553116 - B3 SINE B2 -28 188 7 1 1440 394 106 36 43 chrX 112097259 112097397 -54552899 + (TA)n Simple_repeat Simple_repeat 1 137 0 1 1440 863 92 8 38 chrX 112097856 112098004 -54552292 - L1_Mus1 LINE L1 -1045 5955 5816 1 1440 4812 63 0 2 chrX 112098007 112098612 -54551684 + L1_Mus1 LINE L1 5964 6567 0 1 1440 238 309 73 48 chrX 112100115 112100254 -54550042 + MIR SINE MIR 2 143 -119 1 1440 402 86 0 54 chrX 112100254 112100328 -54549968 + L1Md_F2 LINE L1 6510 6579 -3 1 1440 238 309 73 48 chrX 112100328 112100436 -54549860 + MIR SINE MIR 144 254 -8 1 1440 21 36 0 0 chrX 112100456 112100484 -54549812 + AT_rich Low_complexity Low_complexity 1 28 0 1 1440 540 298 24 18 chrX 112101242 112101406 -54548890 - ID_B1 SINE B4 -42 182 18 1 1440 200 86 29 0 chrX 112101823 112101858 -54548438 + (TTTCC)n Simple_repeat Simple_repeat 4 39 0 1 1440 225 333 89 75 chrX 112102279 112102571 -54547725 - L2c LINE L2 -78 3309 3014 1 1440 450 66 0 38 chrX 112103656 112103735 -54546561 - L1Md_F3 LINE L1 -3 6581 6506 1 1440 685 308 74 39 chrX 112104108 112104594 -54545702 + L1MA4 LINE L1 5599 6110 -190 1 1440 3357 74 43 2 chrX 112104672 112105135 -54545161 + RLTR45 LTR ERVK 1 482 0 1 1440 1649 60 89 35 chrX 112105135 112105392 -54544904 + RLTR45-int LTR ERVK 1 271 -6973 1 1440 1144 43 0 0 chrX 112105491 112105629 -54544667 + RLTR45-int LTR ERVK 681 818 -6426 1 1440 14099 41 50 7 chrX 112106390 112108203 -54542093 + RLTR45-int LTR ERVK 1322 3212 -4032 1 1440 3920 82 30 36 chrX 112108173 112108784 -54541512 + RLTR45-int LTR ERVK 3380 3986 -3258 1 1440 8523 139 19 43 chrX 112108777 112111022 -54539274 + RLTR45-int LTR ERVK 5065 7244 0 1 1440 3443 71 34 2 chrX 112111022 112111489 -54538807 + RLTR45 LTR ERVK 1 482 0 1 1440 418 327 13 32 chrX 112111554 112111709 -54538587 + RSINE1 SINE B4 14 165 0 1 1440 24 67 0 0 chrX 112112000 112112045 -54538251 + AT_rich Low_complexity Low_complexity 1 45 0 1 1440 396 0 0 0 chrX 112112127 112112171 -54538125 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1440 480 35 0 0 chrX 112112171 112112228 -54538068 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1440 1081 86 0 0 chrX 112112960 112113099 -54537197 - B1_Mus2 SINE Alu -6 141 3 2 1440 843 64 0 0 chrX 112113348 112113458 -54536838 + (GGGAGA)n Simple_repeat Simple_repeat 6 115 0 2 1440 29 60 0 0 chrX 112113516 112113566 -54536730 + AT_rich Low_complexity Low_complexity 1 50 0 2 1440 2050 117 0 3 chrX 112113567 112113867 -54536429 - Lx3A LINE L1 -3 6978 6680 2 1440 35463 44 0 3 chrX 112115058 112120330 -54529966 + L1Md_T LINE L1 238 5589 -297 2 1440 8477 33 0 0 chrX 112120330 112121323 -54528973 + L1Md_T LINE L1 5590 6582 -3 2 1440 20836 69 2 6 chrX 112122303 112125742 -54524554 - L1Md_F2 LINE L1 -12 6570 3144 2 1440 948 18 0 0 chrX 112125742 112125852 -54524444 + (TTC)n Simple_repeat Simple_repeat 2 111 0 2 1440 21 0 0 0 chrX 112125868 112125889 -54524407 + AT_rich Low_complexity Low_complexity 1 21 0 2 1440 658 289 74 0 chrX 112127097 112127246 -54523050 - RSINE1 SINE B4 -2 163 4 2 1440 350 211 222 0 chrX 112127268 112127358 -54522938 - PB1D9 SINE Alu -8 112 3 2 1440 393 103 0 0 chrX 112129195 112129263 -54521033 + (T)n Simple_repeat Simple_repeat 1 68 0 2 1440 1137 51 0 0 chrX 112129268 112129405 -54520891 - B1_Mus2 SINE Alu -9 138 2 2 1440 885 132 0 85 chrX 112130481 112130646 -54519650 - RLTR45-int LTR ERVK -5918 1326 1176 2 1440 982 133 38 0 chrX 112130825 112130983 -54519313 - RLTR45-int LTR ERVK -6067 1177 1014 2 1440 13604 93 22 1 chrX 112130984 112133658 -54516638 - L1Md_F LINE L1 -2732 3151 420 2 1440 402 115 0 0 chrX 112134052 112134113 -54516183 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 1440 626 185 7 0 chrX 112135380 112135515 -54514781 + GA-rich Low_complexity Low_complexity 3 138 0 2 1440 468 0 0 0 chrX 112135777 112135829 -54514467 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1440 486 171 0 0 chrX 112135908 112135975 -54514321 + T-rich Low_complexity Low_complexity 74 140 0 2 1440 640 105 87 174 chrX 112135975 112136136 -54514160 - B1_Mus2 SINE Alu 0 147 1 2 1440 486 171 0 0 chrX 112136136 112136208 -54514088 + T-rich Low_complexity Low_complexity 2 73 0 2 1440 340 347 0 39 chrX 112136590 112136719 -54513577 + B3A SINE B2 7 130 -68 2 1440 1050 321 116 31 chrX 112136789 112137963 -54512333 + Lx6 LINE L1 4163 5436 -444 2 1440 1690 289 80 90 chrX 112137977 112138222 -54512074 + Lx9 LINE L1 6640 6880 -764 2 1440 1193 54 0 0 chrX 112138222 112138369 -54511927 + B1_Mus2 SINE Alu 1 147 0 2 1440 1690 289 80 90 chrX 112138369 112139123 -54511173 + Lx9 LINE L1 6881 7629 -15 2 1440 558 329 48 36 chrX 112139134 112139604 -54510692 + Lx6 LINE L1 5430 5920 -1540 2 1440 394 259 198 0 chrX 112141358 112141474 -54508822 + B1_Mur2 SINE Alu 4 142 -7 2 1440 26 50 0 0 chrX 112141533 112141573 -54508723 + AT_rich Low_complexity Low_complexity 1 40 0 2 1440 2126 269 98 26 chrX 112142456 112143272 -54507024 - Lx6 LINE L1 -3 7457 6566 2 1440 2279 198 59 9 chrX 112143275 112143719 -54506577 + MTC-int LTR MaLR 66 531 -727 2 1440 582 217 224 0 chrX 112143721 112143882 -54506414 - RMER1B Other Other 0 1066 870 2 1440 1413 247 27 7 chrX 112143901 112144199 -54506097 - RMER1B Other Other -340 726 423 2 1440 2624 193 85 26 chrX 112144199 112144778 -54505518 - RMER20B LTR ERVK -14 613 1 2 1440 1689 243 77 59 chrX 112144781 112145518 -54504778 - RMER1B Other Other -540 526 44 2 1440 2687 190 69 97 chrX 112145642 112146192 -54504104 + MTC-int LTR MaLR 522 1359 -433 2 1440 3527 70 30 2 chrX 112146192 112146661 -54503635 + RLTR45 LTR ERVK 1 482 0 2 1440 2687 184 71 100 chrX 112146661 112146923 -54503373 + MTC-int LTR MaLR 982 1258 0 2 1440 1741 223 42 10 chrX 112146923 112147331 -54502965 + MTC LTR MaLR 1 421 0 2 1440 1251 276 48 23 chrX 112148631 112148996 -54501300 + ORR1D2 LTR MaLR 1 379 0 2 1440 977 237 0 10 chrX 112149021 112149228 -54501068 + ORR1D2-int LTR MaLR 1 205 -1165 2 1440 835 191 21 43 chrX 112149228 112149414 -54500882 - URR1A DNA MER1_type -1 225 44 2 1440 483 283 104 74 chrX 112149414 112149535 -54500761 + CYRA11_Mm Unknown Y-chromosome 172 487 -130 2 1440 234 347 0 95 chrX 112149426 112149563 -54500733 + ORR1D2-int LTR MaLR 196 319 -1190 2 1440 400 224 47 0 chrX 112149575 112149682 -54500614 + Lx9 LINE L1 7531 7642 -2 2 1440 2714 275 75 54 chrX 112149696 112150549 -54499747 + ORR1D2-int LTR MaLR 314 1184 -186 2 1440 2336 223 33 6 chrX 112150598 112151113 -54499183 + RMER5 LTR ERV1 5 533 -1 2 1440 760 177 35 23 chrX 112151113 112151306 -54498990 + ORR1D2-int LTR MaLR 1178 1316 -54 2 1440 1148 288 92 0 chrX 112151275 112151591 -54498705 + ORR1D2 LTR MaLR 20 364 -6 2 1440 5388 116 16 6 chrX 112151820 112152617 -54497679 + Lx3C LINE L1 6172 6976 0 2 1440 1003 306 20 31 chrX 112152739 112153185 -54497111 + L1_Mur3 LINE L1 4976 5416 -464 2 1440 787 313 72 22 chrX 112153236 112153514 -54496782 - MTA_Mm LTR MaLR -73 297 6 2 1440 808 287 88 7 chrX 112153505 112153932 -54496364 - MTA_Mm-int LTR MaLR -979 601 94 2 1440 2033 313 34 17 chrX 112154035 112154685 -54495611 + Lx8 LINE L1 6679 7339 -134 2 1440 423 0 0 0 chrX 112154766 112154813 -54495483 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 2 1440 2684 98 9 6 chrX 112155214 112155608 -54494688 - MTA_Mm LTR MaLR -14 382 1 2 1440 203 229 21 0 chrX 112155844 112155892 -54494404 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 1440 24 32 0 0 chrX 112156539 112156570 -54493726 + AT_rich Low_complexity Low_complexity 1 31 0 2 1440 1196 41 0 0 chrX 112157543 112157689 -54492607 - B1_Mm SINE Alu 0 147 2 2 1440 2648 110 56 5 chrX 112157779 112158190 -54492106 + Lx LINE L1 6223 6654 0 2 1440 1754 300 21 64 chrX 112158428 112158688 -54491608 - Lx7 LINE L1 -454 7006 6760 2 1440 736 57 9 0 chrX 112158688 112158794 -54491502 + L1_Mus1 LINE L1 6461 6567 0 2 1440 2070 229 14 17 chrX 112158794 112159255 -54491041 - Lx7 LINE L1 -936 6760 6316 2 1440 1009 232 107 69 chrX 112159259 112159627 -54490669 + Lx7 LINE L1 7036 7417 -279 2 1440 411 21 0 0 chrX 112159627 112159675 -54490621 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1440 286 408 87 20 chrX 112159835 112159954 -54490342 + RSINE1 SINE B4 6 133 -32 2 1440 459 0 0 0 chrX 112159954 112160005 -54490291 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1440 286 408 87 20 chrX 112160005 112160035 -54490261 + RSINE1 SINE B4 134 164 -1 2 1440 8405 35 0 1 chrX 112160312 112161813 -54488483 - L1Md_A LINE L1 -2 6580 5108 2 1440 1035 125 0 0 chrX 112161949 112162093 -54488203 + B1_Mus1 SINE Alu 1 144 -4 2 1440 540 45 0 0 chrX 112162097 112162164 -54488132 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 2 1440 275 146 0 18 chrX 112162373 112162429 -54487867 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1440 369 0 0 0 chrX 112162455 112162496 -54487800 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1440 369 0 0 0 chrX 112162496 112162536 -54487760 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 1440 1078 60 0 0 chrX 112162538 112162672 -54487624 - B1_Mus1 SINE Alu -13 135 2 2 1440 3251 121 22 13 chrX 112163115 112163650 -54486646 - Lx3_Mus LINE L1 0 7009 6470 2 1440 1441 210 189 83 chrX 112163840 112164464 -54485832 - RMER6C LTR ERVK 0 690 1 2 1440 1073 143 22 17 chrX 112164597 112164775 -54485521 + B2_Mm2 SINE B2 3 181 -14 2 1440 388 75 340 9 chrX 112164788 112164894 -54485402 + B2_Mm2 SINE B2 47 187 -8 2 1440 679 349 31 8 chrX 112165140 112165397 -54484899 + B4A SINE B4 24 286 -6 2 1440 590 247 97 16 chrX 112166773 112166958 -54483338 + Lx5 LINE L1 6848 7047 -3 2 1440 644 171 12 131 chrX 112168308 112168476 -54481820 + B1_Mus1 SINE Alu 1 148 0 2 1440 279 133 0 0 chrX 112168476 112168521 -54481775 + (A)n Simple_repeat Simple_repeat 1 45 0 2 1440 885 126 0 0 chrX 112168566 112168709 -54481587 + (TTTC)n Simple_repeat Simple_repeat 2 144 0 2 1440 1062 93 0 0 chrX 112168711 112168851 -54481445 - B1_Mus1 SINE Alu -7 141 2 2 1440 31 0 0 0 chrX 112168856 112168887 -54481409 + AT_rich Low_complexity Low_complexity 1 31 0 2 1440 247 309 66 0 chrX 112168887 112169023 -54481273 - Lx7 LINE L1 -18 7678 7534 2 1440 562 306 171 4 chrX 112169096 112169342 -54480954 + Lx7 LINE L1 6738 7024 -672 2 1440 387 0 0 0 chrX 112169371 112169414 -54480882 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2 1440 8904 111 19 10 chrX 112169414 112170471 -54479825 - Lx3A LINE L1 -15 6966 5904 2 1440 394 33 16 16 chrX 112170471 112170532 -54479764 + (TTTA)n Simple_repeat Simple_repeat 4 64 0 2 1440 8904 88 67 1 chrX 112170532 112170944 -54479352 - Lx3A LINE L1 -1078 5903 5468 2 1440 1813 196 59 39 chrX 112171963 112172419 -54477877 + RMER6C LTR ERVK 3 467 -223 2 1440 975 117 79 12 chrX 112172419 112172565 -54477731 + B2_Mm2 SINE B2 2 159 -36 2 1440 405 0 0 0 chrX 112172565 112172610 -54477686 + (CAAT)n Simple_repeat Simple_repeat 2 46 0 2 1440 975 117 79 12 chrX 112172610 112172627 -54477669 + B2_Mm2 SINE B2 160 176 -19 2 1440 1215 167 23 70 chrX 112172616 112172874 -54477422 + RMER6C LTR ERVK 445 690 0 2 1440 244 328 16 8 chrX 112173389 112173518 -54476778 + L1MD3 LINE L1 7587 7716 -279 2 1440 1250 104 11 11 chrX 112173840 112174025 -54476271 - B2_Mm1t SINE B2 -8 185 1 2 1440 258 261 0 54 chrX 112174283 112174376 -54475920 + L1ME2 LINE L1 5914 6001 -163 2 1440 324 0 0 0 chrX 112175668 112175704 -54474592 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 2 1440 935 141 0 0 chrX 112175704 112175839 -54474457 - B1_Mus1 SINE Alu -12 136 2 2 1440 820 232 35 35 chrX 112177116 112177344 -54472952 + Lx5 LINE L1 6822 7049 -1 2 1440 522 0 0 0 chrX 112177610 112177668 -54472628 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 1440 1370 19 0 0 chrX 112177777 112177933 -54472363 + L1Md_A LINE L1 5431 5586 -297 2 1440 8344 37 0 0 chrX 112177933 112178929 -54471367 + L1Md_A LINE L1 5587 6582 0 2 1440 827 90 0 8 chrX 112179946 112180069 -54470227 + (TTCC)n Simple_repeat Simple_repeat 3 124 0 2 1440 29 28 0 0 chrX 112180273 112180309 -54469987 + AT_rich Low_complexity Low_complexity 1 36 0 2 1440 236 300 72 26 chrX 112180318 112180513 -54469783 - L1MA6 LINE L1 -32 6268 6065 2 1440 1247 202 193 13 chrX 112181143 112181444 -54468852 - ORR1B2 LTR MaLR -12 355 1 2 1440 6664 193 54 9 chrX 112181444 112182875 -54467421 - ORR1B2-int LTR MaLR -1 1508 14 2 1440 1325 182 170 13 chrX 112182879 112182944 -54467352 - ORR1B2 LTR MaLR 0 367 303 2 1440 307 0 23 23 chrX 112182944 112182988 -54467308 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 2 1440 1325 182 170 13 chrX 112182988 112183239 -54467057 - ORR1B2 LTR MaLR -65 302 1 2 1440 620 93 0 0 chrX 112183447 112183533 -54466763 - BC1_Mm scRNA scRNA -66 86 1 2 1440 250 284 30 50 chrX 112183533 112183633 -54466663 + B3 SINE B2 119 216 0 2 1440 1355 328 47 8 chrX 112183655 112184169 -54466127 - Lx9 LINE L1 -610 7034 6501 2 1440 1089 206 24 55 chrX 112184525 112184812 -54465484 - RMER17C LTR ERVK -8 402 125 2 1440 185 0 40 0 chrX 112184812 112184837 -54465459 + (GAGAA)n Simple_repeat Simple_repeat 5 30 0 2 1440 1089 206 24 55 chrX 112184837 112184877 -54465419 - RMER17C LTR ERVK -286 124 85 2 1440 786 118 6 56 chrX 112184877 112185056 -54465240 + GA-rich Low_complexity Low_complexity 4 173 0 2 1440 842 169 19 50 chrX 112185067 112185328 -54464968 - RMER17C LTR ERVK -157 253 1 2 1440 22 35 0 0 chrX 112186867 112186896 -54463400 + AT_rich Low_complexity Low_complexity 1 29 0 2 1440 2552 60 24 0 chrX 112187333 112187665 -54462631 + L1_Mus1 LINE L1 6227 6566 -1 2 1440 1218 111 0 0 chrX 112187672 112187844 -54462452 + B2_Mm2 SINE B2 1 172 -23 2 1440 518 100 297 9 chrX 112187877 112187988 -54462308 + B2_Mm2 SINE B2 45 187 -8 3 1440 450 79 0 0 chrX 112188088 112188151 -54462145 + (TA)n Simple_repeat Simple_repeat 1 63 0 3 1440 21 36 0 0 chrX 112188208 112188236 -54462060 + AT_rich Low_complexity Low_complexity 1 28 0 3 1440 208 356 60 8 chrX 112188389 112188522 -54461774 + L2 LINE L2 2686 2825 -594 3 1440 3990 114 15 7 chrX 112188691 112189290 -54461006 - L1_Mus4 LINE L1 0 6636 6033 3 1440 41122 5 0 0 chrX 112189318 112195851 -54454445 - L1Md_A LINE L1 0 6582 50 3 1440 306 331 84 17 chrX 112196233 112196445 -54453851 - MIRb SINE MIR -36 232 3 3 1440 338 0 24 0 chrX 112196531 112196573 -54453723 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 3 1440 1157 43 0 0 chrX 112196574 112196712 -54453584 - B1_Mm SINE Alu -9 138 1 3 22 1102 300 61 48 chrX 112197431 112197806 -54452490 - MTD LTR MaLR -39 380 1 3 1441 482 332 43 14 chrX 112198562 112198773 -54451523 - ID_B1 SINE B4 -6 218 2 3 1441 465 50 0 0 chrX 112199258 112199318 -54450978 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1441 415 91 0 0 chrX 112199482 112199537 -54450759 - ORR1A3 LTR MaLR 0 326 272 3 1441 850 86 156 0 chrX 112199548 112199676 -54450620 - B1_Mus1 SINE Alu 0 148 1 3 1441 24 53 0 0 chrX 112199695 112199733 -54450563 + AT_rich Low_complexity Low_complexity 1 38 0 3 1441 29831 120 5 29 chrX 112199856 112205872 -54444424 - L1_Mus1 LINE L1 -1 6566 725 3 1441 385 270 23 16 chrX 112205879 112206007 -54444289 - L1_Mus1 LINE L1 -5813 803 675 3 1441 392 304 16 55 chrX 112206037 112206313 -54443983 - L1VL1 LINE L1 -5931 491 45 3 1441 290 154 19 0 chrX 112206575 112206627 -54443669 + ORR1B1 LTR MaLR 1 53 -341 3 1441 2170 191 24 16 chrX 112206627 112207155 -54443141 - RMER6A LTR ERVK -26 730 232 3 1441 735 198 61 6 chrX 112207030 112207193 -54443103 + ORR1B1 LTR MaLR 223 394 0 3 1441 251 173 19 0 chrX 112207316 112207368 -54442928 + Lx2B LINE L1 6824 6876 -124 3 1441 7287 162 24 8 chrX 112207760 112209858 -54440438 - Lx2B LINE L1 -177 6823 4698 3 1441 626 165 108 16 chrX 112209884 112210013 -54440283 - B1_Mus2 SINE Alu -6 141 1 3 1441 672 287 36 26 chrX 112210022 112210215 -54440081 - B3A SINE B2 -3 195 1 3 1441 450 353 51 61 chrX 112210747 112211142 -54439154 - Charlie13a DNA Charlie -579 935 545 3 1441 267 93 0 0 chrX 112211484 112211527 -54438769 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1441 204 40 0 0 chrX 112211676 112211701 -54438595 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1441 256 276 75 33 chrX 112211737 112211857 -54438439 - Tigger7 DNA MER2_type -2018 473 349 3 1441 4143 178 105 9 chrX 112212071 112212945 -54437351 + RMER17B LTR ERVK 1 958 0 3 1441 3260 50 10 0 chrX 112213313 112213792 -54436504 + L1_Mus1 LINE L1 6159 6567 0 3 1441 678 67 11 0 chrX 112213792 112213882 -54436414 + L1_Mus2 LINE L1 6211 6301 -265 3 1441 2041 269 107 21 chrX 112214949 112215606 -54434690 + RMER1C Other Other 535 1247 -95 3 1441 423 0 0 0 chrX 112215709 112215756 -54434540 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 1441 537 16 0 0 chrX 112216050 112216112 -54434184 + (TTTTG)n Simple_repeat Simple_repeat 4 65 0 3 1441 3054 86 0 0 chrX 112216161 112216696 -54433600 - L1_Mus2 LINE L1 -585 5981 5447 3 1441 317 358 127 32 chrX 112216770 112217266 -54433030 - L1M5 LINE L1 -791 5355 4813 3 1441 881 319 34 40 chrX 112217537 112217916 -54432380 + MTE2b LTR MaLR 3 379 0 3 1441 1662 274 51 82 chrX 112218061 112218839 -54431457 - RMER6A LTR ERVK -2 754 1 3 1441 189 0 0 0 chrX 112219066 112219087 -54431209 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 3 1441 873 344 25 11 chrX 112219105 112219384 -54430912 + ORR1D2 LTR MaLR 1 283 -87 3 1441 333 222 6 9 chrX 112219806 112219883 -54430413 - RLTR20B3 LTR ERVK -59 518 435 3 1441 20121 83 49 6 chrX 112219883 112223476 -54426820 - L1Md_F LINE L1 -1963 3920 171 3 1441 3420 185 9 34 chrX 112223861 112224535 -54425761 - RMER17B LTR ERVK 0 958 302 3 1441 1126 79 48 12 chrX 112224535 112224686 -54425610 + B2_Mm2 SINE B2 1 158 -37 3 1441 186 43 0 0 chrX 112224686 112224709 -54425587 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 3 1441 1126 79 48 12 chrX 112224709 112224723 -54425573 + B2_Mm2 SINE B2 159 172 -23 3 1441 1906 149 6 12 chrX 112224719 112225038 -54425258 - RMER17B LTR ERVK -641 317 1 3 1441 1980 93 4 0 chrX 112225038 112225307 -54424989 - L1_Mus4 LINE L1 -455 6181 5912 3 1441 1193 324 49 16 chrX 112225315 112225826 -54424470 - Lx9 LINE L1 -850 6794 6267 3 1441 241 258 20 20 chrX 112225828 112225927 -54424369 + (TTAA)n Simple_repeat Simple_repeat 2 100 0 3 1441 579 282 14 13 chrX 112226211 112226481 -54423815 - Lx9 LINE L1 -1679 5965 5673 3 1441 539 306 116 51 chrX 112226495 112226788 -54423508 + Lx9 LINE L1 6993 7304 -340 3 1441 33395 52 4 53 chrX 112226834 112228966 -54421330 - L1Md_F3 LINE L1 -16 6571 4880 3 1441 7751 64 2 0 chrX 112228966 112229948 -54420348 + L1Md_F2 LINE L1 5587 6570 -12 3 1441 33395 93 23 93 chrX 112229948 112234543 -54415753 - L1Md_F3 LINE L1 -1007 4879 301 3 1441 1962 210 135 17 chrX 112234543 112235054 -54415242 - RMER4B LTR ERVK -12 573 2 3 1441 431 78 16 0 chrX 112235189 112235253 -54415043 + (TA)n Simple_repeat Simple_repeat 2 66 0 3 1441 371 38 19 0 chrX 112235427 112235480 -54414816 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 1441 246 32 0 0 chrX 112235917 112235948 -54414348 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1441 24 0 0 0 chrX 112236130 112236154 -54414142 + AT_rich Low_complexity Low_complexity 1 24 0 3 1441 227 400 0 0 chrX 112236431 112236516 -54413780 + B1F2 SINE Alu 1 85 -64 3 1441 5322 150 26 13 chrX 112238765 112239704 -54410592 - Lx3C LINE L1 -3 6973 6023 3 1441 2689 94 0 5 chrX 112240299 112240674 -54409622 + L1_Mus1 LINE L1 6195 6567 0 3 1441 33799 82 8 3 chrX 112240685 112246232 -54404064 + L1Md_F3 LINE L1 7 5585 -298 3 1441 7925 56 0 4 chrX 112246233 112247234 -54403062 + L1Md_F3 LINE L1 5587 6583 -1 3 1441 191 0 0 94 chrX 112247268 112247300 -54402996 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1441 1028 75 61 0 chrX 112247312 112247462 -54402834 + B2_Mm2 SINE B2 1 160 -33 3 1441 477 0 0 0 chrX 112247462 112247515 -54402781 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 3 1441 982 109 59 29 chrX 112247515 112247534 -54402762 + B2_Mm1a SINE B2 161 175 -18 3 1441 33 43 0 0 chrX 112247876 112247923 -54402373 + AT_rich Low_complexity Low_complexity 1 47 0 3 1441 1578 54 0 0 chrX 112248732 112248936 -54401360 - L1Md_F2 LINE L1 -4 6578 6375 3 1441 216 0 0 0 chrX 112249488 112249512 -54400784 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1441 534 301 47 26 chrX 112249930 112250121 -54400175 + B3A SINE B2 3 197 -1 3 1441 26 0 0 0 chrX 112250121 112250147 -54400149 + AT_rich Low_complexity Low_complexity 1 26 0 3 1441 582 54 0 0 chrX 112250316 112250390 -54399906 + (TA)n Simple_repeat Simple_repeat 1 74 0 3 1441 279 355 30 25 chrX 112250682 112250850 -54399446 - MIRb SINE MIR 0 268 97 3 1441 8044 163 26 11 chrX 112250966 112251515 -54398781 + Lx2 LINE L1 5505 6073 -924 3 1441 432 0 0 0 chrX 112251515 112251563 -54398733 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1441 8044 160 22 13 chrX 112251563 112252495 -54397801 + Lx2 LINE L1 6074 6996 -1 3 1441 777 278 6 78 chrX 112252733 112253080 -54397216 + Lx8 LINE L1 5505 5826 -21 3 1441 183 42 0 0 chrX 112253147 112253171 -54397125 + (CAA)n Simple_repeat Simple_repeat 2 25 0 3 1441 1768 332 68 41 chrX 112253471 112254432 -54395864 + Lx8 LINE L1 6089 7075 -398 3 1441 398 106 41 59 chrX 112254653 112254823 -54395473 + A-rich Low_complexity Low_complexity 4 170 0 3 1441 1828 161 54 11 chrX 112255405 112255757 -54394539 - ORR1B2 LTR MaLR 0 367 1 3 1441 315 328 35 9 chrX 112255759 112255873 -54394423 - Lx8 LINE L1 -144 7329 7213 3 1441 2300 76 16 0 chrX 112256321 112256624 -54393672 - L1_Mm LINE L1 -210 5673 5366 3 1441 1249 70 0 34 chrX 112256624 112256802 -54393494 + L1Md_F2 LINE L1 6399 6570 -12 3 1441 5381 167 35 28 chrX 112256854 112258123 -54392173 + L1Md_T LINE L1 99 1205 -5411 3 1441 36109 33 1 0 chrX 112258129 112262544 -54387752 + L1Md_T LINE L1 1170 5586 -297 3 1441 7992 56 0 0 chrX 112262544 112263540 -54386756 + L1Md_T LINE L1 5587 6582 0 3 1441 734 271 6 33 chrX 112263541 112263724 -54386572 + B3 SINE B2 29 206 -10 3 1441 185 0 0 39 chrX 112263724 112263750 -54386546 + (TAA)n Simple_repeat Simple_repeat 2 26 0 3 1441 21 0 0 0 chrX 112264876 112264897 -54385399 + AT_rich Low_complexity Low_complexity 1 21 0 3 1441 1213 68 0 22 chrX 112265037 112265216 -54385080 + (CATATA)n Simple_repeat Simple_repeat 2 176 0 3 1441 2576 301 53 45 chrX 112265220 112266372 -54383924 - Lx9 LINE L1 -235 7409 6249 3 1441 28 48 0 0 chrX 112267218 112267260 -54383036 + AT_rich Low_complexity Low_complexity 1 42 0 3 1441 23 68 0 0 chrX 112267505 112267549 -54382747 + AT_rich Low_complexity Low_complexity 1 44 0 3 1441 291 306 10 15 chrX 112268078 112268219 -54382077 - Charlie4z DNA MER1_type 0 167 31 3 1441 441 0 0 0 chrX 112268491 112268540 -54381756 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1441 372 22 0 0 chrX 112269563 112269608 -54380688 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1441 225 0 0 0 chrX 112269608 112269632 -54380664 + (TA)n Simple_repeat Simple_repeat 1 25 0 3 1441 37563 16 0 7 chrX 112269705 112274890 -54375406 + L1Md_A LINE L1 445 5586 -297 3 1441 8838 13 0 0 chrX 112274890 112275885 -54374411 + L1Md_A LINE L1 5587 6581 -1 3 1441 351 0 0 0 chrX 112276329 112276368 -54373928 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 1441 3724 165 34 4 chrX 112276875 112277601 -54372695 + L1_Mur2 LINE L1 4438 5185 -692 3 1441 3929 173 18 15 chrX 112277612 112278405 -54371891 - L1_Mur2 LINE L1 -1437 4440 3646 3 1441 1712 144 11 7 chrX 112278392 112278679 -54371617 - Lx3_Mus LINE L1 0 7009 6722 3 1441 2160 49 0 0 chrX 112278675 112278942 -54371354 - L1Md_F2 LINE L1 -655 5927 5661 3 1441 1314 102 0 10 chrX 112278942 112279139 -54371157 + L1Md_F2 LINE L1 6388 6582 0 3 1441 1312 324 51 6 chrX 112279223 112279732 -54370564 + Lx8 LINE L1 6715 7246 -227 3 1441 3132 62 10 0 chrX 112279756 112280162 -54370134 - L1_Mus2 LINE L1 -443 6123 5714 3 1441 2987 91 16 23 chrX 112280158 112280597 -54369699 + L1_Mus2 LINE L1 6106 6541 -25 3 1441 30730 109 8 19 chrX 112280603 112284481 -54365815 + L1_Mus1 LINE L1 377 4195 -1688 3 1441 414 0 0 0 chrX 112284481 112284527 -54365769 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1441 30730 110 8 5 chrX 112284527 112286870 -54363426 + L1_Mus1 LINE L1 4196 6555 -12 3 1441 225 209 44 15 chrX 112288244 112288312 -54361984 + Lx3C LINE L1 684 753 -6231 4 1441 2495 197 20 17 chrX 112288480 112288837 -54361459 + Lx3C LINE L1 800 1155 -5829 4 1441 207 0 0 0 chrX 112288837 112288860 -54361436 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1441 6378 164 60 14 chrX 112288860 112289689 -54360607 + Lx3C LINE L1 1156 2059 -3827 4 1441 1248 96 0 0 chrX 112289689 112289963 -54360333 + (CA)n Simple_repeat Simple_repeat 1 274 0 4 1441 6378 162 62 14 chrX 112289963 112290482 -54359814 + Lx3C LINE L1 2060 2582 -3304 4 1441 9132 45 17 2 chrX 112290480 112291619 -54358677 + L1Md_F2 LINE L1 4430 5585 -298 4 1441 7995 46 2 3 chrX 112291620 112292613 -54357683 + L1Md_F2 LINE L1 5587 6578 -4 4 1441 2983 170 11 2 chrX 112292636 112293185 -54357111 + Lx3C LINE L1 4818 5371 -515 4 1441 3446 110 28 0 chrX 112293184 112293686 -54356610 + L1_Mus3 LINE L1 6094 6609 -29 4 1441 432 37 0 0 chrX 112293688 112293742 -54356554 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 1441 6747 194 27 16 chrX 112293742 112295327 -54354969 + Lx3C LINE L1 5362 6976 0 4 1441 518 115 23 0 chrX 112295327 112295414 -54354882 + (GAAA)n Simple_repeat Simple_repeat 4 92 0 4 1441 335 370 67 0 chrX 112295963 112296082 -54354214 + RSINE1 SINE B4 7 133 -32 4 1441 2573 83 0 3 chrX 112296089 112296428 -54353868 - L1_Mus3 LINE L1 -357 6281 5944 4 1441 255 337 0 0 chrX 112296776 112296859 -54353437 + ID4_ SINE ID 1 83 0 4 1441 402 285 132 26 chrX 112296871 112297105 -54353191 + L1M4c LINE L1 2215 2473 -3911 4 1441 15516 19 0 0 chrX 112297114 112298919 -54351377 + L1Md_T LINE L1 3782 5586 -297 4 1441 9005 4 0 0 chrX 112298919 112299915 -54350381 + L1Md_T LINE L1 5587 6582 0 4 1441 8103 14 0 0 chrX 112300027 112300942 -54349354 - L1Md_A LINE L1 -1 6581 5667 4 1441 339 276 207 6 chrX 112301279 112301649 -54348647 + L1_Rod LINE L1 905 1348 -6260 4 1441 375 330 141 24 chrX 112301651 112301913 -54348383 + RMER20B LTR ERVK 169 483 -144 4 1441 446 271 122 34 chrX 112302129 112302366 -54347930 + L1_Rod LINE L1 1667 1924 -3923 4 1441 443 328 76 0 chrX 112302375 112302573 -54347723 + B3 SINE B2 4 216 0 4 1441 3999 11 2 0 chrX 112302651 112303104 -54347192 - L1Md_A LINE L1 -2 6580 6127 4 1441 475 287 33 0 chrX 112303106 112303228 -54347068 + B1_Mur1 SINE Alu 18 143 -6 4 1441 180 111 0 0 chrX 112303342 112303369 -54346927 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 4 1441 1776 290 53 53 chrX 112303429 112304424 -54345872 + L1_Rod LINE L1 1990 2984 -2863 4 1441 194 57 0 54 chrX 112304428 112304465 -54345831 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 4 1441 677 292 27 113 chrX 112304487 112304858 -54345438 - RLTR40 LTR ERVK -13 804 466 4 1441 3300 183 160 100 chrX 112305024 112305110 -54345186 - RLTR25B LTR ERVK -10 1018 932 4 1441 558 0 0 0 chrX 112305110 112305172 -54345124 + (TC)n Simple_repeat Simple_repeat 2 63 0 4 1441 386 39 19 0 chrX 112305172 112305223 -54345073 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1441 3300 183 160 100 chrX 112305223 112305582 -54344714 - RLTR25B LTR ERVK -97 931 568 4 1441 225 65 0 0 chrX 112305582 112305613 -54344683 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1441 3300 183 160 100 chrX 112305613 112305804 -54344492 - RLTR25B LTR ERVK -461 567 322 4 1441 405 0 0 0 chrX 112305804 112305849 -54344447 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1441 3300 183 160 100 chrX 112305849 112306167 -54344129 - RLTR25B LTR ERVK -707 321 8 4 1441 216 373 78 20 chrX 112306168 112306321 -54343975 + MIR SINE MIR 79 240 -22 4 1441 569 261 24 18 chrX 112306326 112306494 -54343802 - Lx5 LINE L1 -125 6925 6757 4 1441 234 204 0 0 chrX 112306682 112306736 -54343560 + Lx8 LINE L1 7417 7470 -3 4 1441 309 309 30 20 chrX 112306761 112306860 -54343436 + L1MA4 LINE L1 2264 2363 -3780 4 1441 1207 214 16 31 chrX 112307064 112307320 -54342976 - RMER19B LTR ERVK -602 300 49 4 1441 21597 139 89 5 chrX 112307412 112312232 -54338064 - L1_Mus3 LINE L1 -11 6627 1374 4 1441 447 301 40 50 chrX 112312229 112312552 -54337744 - L1VL4 LINE L1 -5743 817 512 4 1441 447 187 55 0 chrX 112312563 112312654 -54337642 - RMER19B LTR ERVK -804 98 3 4 1441 487 257 73 35 chrX 112312656 112312930 -54337366 + L1MA4 LINE L1 4739 5054 -1089 4 1441 5212 80 6 0 chrX 112312991 112313677 -54336619 + L1_Mus1 LINE L1 5877 6566 -1 4 1441 319 113 16 16 chrX 112313873 112313936 -54336360 + (TTTC)n Simple_repeat Simple_repeat 2 64 0 4 1441 2760 180 70 20 chrX 112314037 112314592 -54335704 - Lx3C LINE L1 -11 6965 6383 4 1441 438 233 249 0 chrX 112315011 112315260 -54335036 - Lx9 LINE L1 -8 7636 7326 4 1441 784 294 4 13 chrX 112315350 112315373 -54334923 - Lx9 LINE L1 -701 6943 6921 4 1441 2846 156 63 4 chrX 112315373 112315883 -54334413 + Lx LINE L1 6113 6652 -2 4 1441 784 294 4 13 chrX 112315883 112316093 -54334203 - Lx9 LINE L1 -724 6920 6712 4 1441 825 249 166 8 chrX 112316095 112316330 -54333966 + MTD LTR MaLR 134 405 -14 4 1441 891 322 58 28 chrX 112316394 112316975 -54333321 + L1MA4 LINE L1 5286 5884 -416 4 1441 6273 97 23 96 chrX 112317218 112318279 -54332017 - RLTR13C1 LTR ERVK 0 983 1 4 1441 1009 90 0 20 chrX 112318302 112318437 -54331859 + B1_Mus1 SINE Alu 5 137 -11 4 1441 251 71 24 0 chrX 112318437 112318479 -54331817 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1441 1009 90 0 20 chrX 112318479 112318490 -54331806 + B1_Mus1 SINE Alu 138 148 0 4 1441 553 287 105 63 chrX 112318628 112319065 -54331231 + L1MB1 LINE L1 5583 6057 -111 4 1441 710 305 14 0 chrX 112319065 112319278 -54331018 + B3 SINE B2 1 216 0 4 1441 553 287 105 63 chrX 112319278 112319335 -54330961 + L1MB1 LINE L1 6058 6098 -70 4 1441 230 132 54 54 chrX 112319694 112319750 -54330546 + Helitron1Nb_Mam RC Helitron 387 442 -674 4 1441 758 134 5 0 chrX 112319992 112320123 -54330173 - B1_Mus1 SINE Alu 0 148 14 4 1441 24 77 0 0 chrX 112320391 112320443 -54329853 + AT_rich Low_complexity Low_complexity 1 52 0 4 1441 233 228 174 87 chrX 112320508 112320657 -54329639 + RMER15 LTR ERVL 1 162 -413 4 1441 768 339 25 14 chrX 112320648 112320932 -54329364 + RMER15 LTR ERVL 273 559 -16 4 1441 1579 149 17 3 chrX 112321305 112321595 -54328701 - L1_Mur2 LINE L1 -1213 4664 4371 4 1441 1530 257 33 47 chrX 112321585 112322014 -54328282 + Lx5 LINE L1 6625 7047 -3 4 1441 3115 66 5 2 chrX 112322241 112322649 -54327647 - L1_Mus3 LINE L1 0 6638 6230 4 1441 4430 80 20 0 chrX 112322652 112323255 -54327041 + L1_Mus3 LINE L1 5587 6201 -437 4 1441 290 26 0 25 chrX 112326310 112326350 -54323946 + (TAA)n Simple_repeat Simple_repeat 3 41 0 4 1441 192 125 0 0 chrX 112326706 112326738 -54323558 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 4 1441 7111 136 3 1 chrX 112326936 112328584 -54321712 - L1Md_F LINE L1 -3564 2319 668 4 1441 245 319 0 0 chrX 112328585 112328679 -54321617 - L1Md_F LINE L1 -5814 705 612 4 1442 520 276 8 0 chrX 112330311 112330445 -54319851 + B1_Mur1 SINE Alu 5 139 -10 4 1442 192 179 0 0 chrX 112330445 112330484 -54319812 + (CAG)n Simple_repeat Simple_repeat 3 41 0 4 1442 1386 172 0 0 chrX 112330504 112330731 -54319565 + Lx2B LINE L1 6435 6661 -339 4 1442 375 144 9 88 chrX 112330731 112330845 -54319451 + Lx2B LINE L1 6896 7000 0 4 1442 279 0 0 0 chrX 112330977 112331008 -54319288 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 1442 306 365 85 42 chrX 112331303 112331515 -54318781 - Lx8 LINE L1 -235 7238 7018 4 1442 254 366 99 47 chrX 112331547 112332103 -54318193 - L2 LINE L2 -1051 2368 1784 4 1442 244 301 13 40 chrX 112332836 112332985 -54317311 + RMER17D2 LTR ERVK 250 394 -415 4 1442 459 52 0 0 chrX 112332985 112333043 -54317253 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 1442 23 68 0 0 chrX 112333065 112333109 -54317187 + AT_rich Low_complexity Low_complexity 1 44 0 4 1442 4567 83 5 2 chrX 112333440 112334053 -54316243 + L1_Mus2 LINE L1 5951 6565 -1 4 1442 237 305 135 10 chrX 112334336 112334432 -54315864 - LTR40a LTR ERVL -407 112 5 4 1442 351 113 0 0 chrX 112334604 112334657 -54315639 + (TGG)n Simple_repeat Simple_repeat 1 53 0 4 1442 189 0 0 0 chrX 112334655 112334676 -54315620 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1442 578 339 52 60 chrX 112334785 112335125 -54315171 - Lx9 LINE L1 -312 7332 6996 4 1442 2399 50 2 214 chrX 112335125 112335588 -54314708 + RLTR10B2 LTR ERVK 1 365 0 4 1442 578 339 52 60 chrX 112335588 112335649 -54314647 - Lx9 LINE L1 -649 6995 6934 4 1442 812 119 44 22 chrX 112335656 112335793 -54314503 + B1_Mur4 SINE Alu 10 149 -1 4 1442 355 301 74 78 chrX 112335859 112336101 -54314195 - Lx9 LINE L1 -698 6946 6706 4 1442 198 0 0 0 chrX 112336101 112336123 -54314173 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 1442 384 370 60 60 chrX 112336175 112336425 -54313871 - B4 SINE B4 -32 260 11 4 1442 28 0 0 0 chrX 112336468 112336496 -54313800 + AT_rich Low_complexity Low_complexity 1 28 0 4 1442 952 291 76 18 chrX 112336750 112337131 -54313165 + ERVL-int LTR ERVL 4370 4772 -985 4 1442 266 215 46 0 chrX 112337140 112337205 -54313091 - Lx8 LINE L1 -1558 5915 5848 4 1442 435 128 2 91 chrX 112337415 112337513 -54312783 + RMER17A2 LTR ERVK 36 147 -759 4 1442 377 306 82 25 chrX 112337521 112337766 -54312530 - L1M4c LINE L1 -4938 2070 1812 4 1442 225 195 36 12 chrX 112337776 112337859 -54312437 + (TATAA)n Simple_repeat Simple_repeat 3 87 0 4 1442 306 323 39 39 chrX 112337866 112337995 -54312301 - L1M4c LINE L1 -5592 1742 1614 4 1442 387 41 0 0 chrX 112338015 112338064 -54312232 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1442 1686 146 10 13 chrX 112338747 112339052 -54311244 + Lx3A LINE L1 6676 6979 -2 4 1442 180 304 0 80 chrX 112339064 112339164 -54311132 + L3 LINE CR1 2747 2838 -1651 4 1442 1779 49 0 13 chrX 112339456 112339685 -54310611 + L1Md_F3 LINE L1 6345 6570 -14 4 1442 309 51 0 0 chrX 112339704 112339743 -54310553 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1442 1209 73 0 0 chrX 112340404 112340582 -54309714 + (TC)n Simple_repeat Simple_repeat 2 179 0 4 1442 249 33 0 0 chrX 112340582 112340611 -54309685 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1442 453 90 0 0 chrX 112340879 112340946 -54309350 + (TATG)n Simple_repeat Simple_repeat 2 68 0 4 1442 255 296 0 53 chrX 112340962 112341037 -54309259 - B1_Mur1 SINE Alu -8 141 71 4 1442 1240 27 0 0 chrX 112343280 112343426 -54306870 - B1_Mus2 SINE Alu 0 147 2 4 1442 498 46 0 0 chrX 112343446 112343511 -54306785 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1442 224 195 0 0 chrX 112343535 112343576 -54306720 + GA-rich Low_complexity Low_complexity 1 41 0 4 1442 7341 79 7 8 chrX 112343765 112344859 -54305437 - L1_Mus1 LINE L1 -1 6566 5478 4 1442 15774 164 45 32 chrX 112344839 112348593 -54301703 - L1_Mus1 LINE L1 -1986 3897 261 4 1442 28 29 0 0 chrX 112348721 112348756 -54301540 + AT_rich Low_complexity Low_complexity 1 35 0 4 1442 30 27 0 0 chrX 112349229 112349266 -54301030 + AT_rich Low_complexity Low_complexity 1 37 0 4 1442 23 0 0 0 chrX 112349803 112349826 -54300470 + AT_rich Low_complexity Low_complexity 1 23 0 4 1442 25 31 0 0 chrX 112350226 112350258 -54300038 + AT_rich Low_complexity Low_complexity 1 32 0 4 1442 1993 106 78 3 chrX 112350271 112350592 -54299704 - Lx LINE L1 -13 6641 6297 4 1442 970 90 0 0 chrX 112350593 112350727 -54299569 + MusHAL1 LINE L1 574 707 -2005 4 1442 21 0 0 0 chrX 112350835 112350856 -54299440 + AT_rich Low_complexity Low_complexity 1 21 0 4 1442 299 290 43 6 chrX 112350856 112350952 -54299344 + Charlie4a DNA MER1_type 411 491 -17 5 1442 243 0 0 0 chrX 112352004 112352031 -54298265 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 5 1442 261 0 0 0 chrX 112352370 112352399 -54297897 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1442 348 141 0 0 chrX 112352856 112352920 -54297376 + RMER4A LTR ERVK 403 466 0 5 1442 201 39 0 0 chrX 112353037 112353063 -54297233 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 5 1442 23 54 0 0 chrX 112353431 112353468 -54296828 + AT_rich Low_complexity Low_complexity 1 37 0 5 1442 999 124 7 0 chrX 112353511 112353664 -54296632 + Lx2 LINE L1 6511 6664 -333 5 1442 1473 86 22 9 chrX 112353668 112353891 -54296405 + Lx3_Mus LINE L1 6784 7009 0 5 1442 1641 179 89 6 chrX 112353911 112354260 -54296036 - Lx3A LINE L1 -8 6973 6596 5 1442 2875 141 6 29 chrX 112354318 112354808 -54295488 - Lx3B LINE L1 -712 6261 5783 5 1442 3350 45 0 0 chrX 112354947 112355350 -54294946 - L1Md_A LINE L1 0 6582 6180 5 1442 2252 80 7 0 chrX 112355350 112355650 -54294646 - L1_Mus1 LINE L1 -34 6533 6232 5 1442 7909 130 30 15 chrX 112355635 112356103 -54294193 - Lx3A LINE L1 -859 5027 4644 5 1442 315 0 0 0 chrX 112356103 112356138 -54294158 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 5 1442 7909 122 20 4 chrX 112356138 112357074 -54293222 - Lx3A LINE L1 -1243 4643 3684 5 1442 3956 176 17 35 chrX 112357098 112357875 -54292421 + Lx3B LINE L1 6211 6973 0 5 1442 21 0 0 0 chrX 112357881 112357902 -54292394 + AT_rich Low_complexity Low_complexity 1 21 0 5 1442 1362 225 10 19 chrX 112358048 112358374 -54291922 - L1_Mur3 LINE L1 -314 5569 5253 5 1442 6288 94 12 9 chrX 112358374 112359273 -54291023 + RLTR13D6 LTR ERVK 1 902 0 5 1442 1107 253 14 56 chrX 112359273 112359303 -54290993 - L1_Mur3 LINE L1 -631 5252 5229 5 1442 6849 136 19 2 chrX 112359309 112361130 -54289166 - L1_Mus3 LINE L1 -7 6631 4773 5 1442 16850 62 4 1 chrX 112361138 112363984 -54286312 - L1Md_F3 LINE L1 -15 6569 3713 5 1442 27881 89 68 60 chrX 112364011 112366464 -54283832 - L1Md_T LINE L1 -2 6583 3958 5 1442 1168 254 30 46 chrX 112366464 112366832 -54283464 - RMER19C LTR ERVK -15 596 235 5 1442 27881 89 68 60 chrX 112366832 112370321 -54279975 - L1Md_T LINE L1 -2 3957 220 5 1442 5410 140 16 3 chrX 112370322 112371248 -54279048 - L1_Mm LINE L1 -1096 4787 3850 5 1442 413 66 16 0 chrX 112371248 112371309 -54278987 + (TC)n Simple_repeat Simple_repeat 2 63 0 5 1442 3427 180 141 48 chrX 112371496 112372376 -54277920 + RMER17B LTR ERVK 1 953 -5 5 1442 869 260 137 26 chrX 112373308 112373659 -54276637 - Lx7 LINE L1 -1828 5868 5446 5 1442 228 357 71 0 chrX 112373672 112373798 -54276498 - Lx9 LINE L1 -973 6671 6537 5 1442 3592 192 35 20 chrX 112373821 112374099 -54276197 + Lx4A LINE L1 6315 6604 -454 5 1442 4799 129 17 122 chrX 112374099 112375112 -54275184 - RMER17A2 LTR ERVK 0 906 1 5 1442 3592 192 35 20 chrX 112375112 112375565 -54274731 + Lx4A LINE L1 6605 7057 -1 5 1442 525 231 26 0 chrX 112375586 112375703 -54274593 - MTC LTR MaLR -301 120 1 5 1442 460 143 19 9 chrX 112375741 112375847 -54274449 + L1_Mus4 LINE L1 6530 6636 0 5 1442 749 294 10 108 chrX 112375848 112376153 -54274143 + Lx7 LINE L1 6984 7258 -438 5 1442 223 241 0 36 chrX 112376191 112376292 -54274004 + T-rich Low_complexity Low_complexity 1 97 0 5 1442 4206 64 2 4 chrX 112376308 112376854 -54273442 - L1Md_F3 LINE L1 -14 6570 6026 5 1442 21123 67 7 5 chrX 112376854 112379679 -54270617 - L1_Mm LINE L1 -58 5825 2996 5 1442 37676 60 2 4 chrX 112379682 112386041 -54264255 - L1Md_T LINE L1 0 6582 233 5 1442 966 134 5 103 chrX 112386115 112386339 -54263957 + MusHAL1 LINE L1 1023 1224 -1488 5 1442 5987 206 136 3 chrX 112386334 112386771 -54263525 + Lx2 LINE L1 4185 4622 -1258 5 1442 405 39 0 0 chrX 112386771 112386822 -54263474 + (CAA)n Simple_repeat Simple_repeat 2 52 0 5 1442 5987 187 75 3 chrX 112386822 112388408 -54261888 + Lx2 LINE L1 4623 6422 -575 5 1442 3418 61 0 7 chrX 112388400 112388831 -54261465 - L1Md_F2 LINE L1 -133 5750 5323 5 1442 6453 64 6 2 chrX 112388831 112389659 -54260637 + L1Md_F2 LINE L1 5740 6570 -12 5 1442 1572 106 26 0 chrX 112389659 112389886 -54260410 + Lx2 LINE L1 6413 6645 -352 5 1442 779 237 55 10 chrX 112389884 112390084 -54260212 + Lx2 LINE L1 6775 6983 -14 5 1442 460 349 109 18 chrX 112390370 112390653 -54259643 - MLT1A0 LTR MaLR -56 309 1 5 1442 4846 76 5 2 chrX 112391804 112392447 -54257849 + L1_Mus2 LINE L1 5922 6566 0 5 1442 31 68 0 0 chrX 112392532 112392591 -54257705 + AT_rich Low_complexity Low_complexity 1 59 0 5 1442 213 39 0 0 chrX 112392937 112392963 -54257333 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 1442 5407 44 5 0 chrX 112393026 112393681 -54256615 - L1Md_F2 LINE L1 -1 6581 5924 5 1442 1248 7 0 0 chrX 112394143 112394290 -54256006 + L1Md_A LINE L1 6435 6581 -1 5 1442 244 299 130 7 chrX 112394311 112394449 -54255847 - Lx7 LINE L1 -1 7695 7541 5 1442 2244 246 99 13 chrX 112394520 112395135 -54255161 - Lx7 LINE L1 -284 7412 6745 5 1442 1131 84 0 32 chrX 112395205 112395390 -54254906 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 5 1442 21 0 0 0 chrX 112395490 112395511 -54254785 + AT_rich Low_complexity Low_complexity 1 21 0 5 1442 3821 108 58 5 chrX 112395552 112396157 -54254139 - L1_Mus4 LINE L1 -6 6630 5994 5 1442 549 224 37 0 chrX 112396157 112396291 -54254005 - L1_Mur3 LINE L1 -763 5117 4979 5 1442 266 196 0 0 chrX 112396294 112396345 -54253951 - L1_Mur3 LINE L1 -1126 4754 4704 5 1442 625 225 231 0 chrX 112396419 112396588 -54253708 - B3 SINE B2 -8 208 1 5 1442 238 381 8 25 chrX 112397787 112398024 -54252272 - L1MEc LINE L1 -6133 267 35 5 1442 243 103 0 0 chrX 112398287 112398326 -54251970 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1442 214 385 24 16 chrX 112398516 112398640 -54251656 - ID_B1 SINE B4 -10 214 90 5 1442 323 368 75 20 chrX 112399849 112399996 -54250300 - MER5A DNA MER1_type -1 188 34 5 1442 210 154 0 0 chrX 112400733 112400772 -54249524 + (TAA)n Simple_repeat Simple_repeat 1 39 0 5 1442 7948 146 18 14 chrX 112401726 112403043 -54247253 - Lx2 LINE L1 0 6997 5676 5 1442 377 333 14 0 chrX 112403091 112403232 -54247064 + MIR SINE MIR 81 223 -39 5 1442 34 24 0 0 chrX 112404667 112404708 -54245588 + AT_rich Low_complexity Low_complexity 1 41 0 5 1442 267 230 0 0 chrX 112404818 112404905 -54245391 + CT-rich Low_complexity Low_complexity 1 87 0 5 1442 273 75 0 0 chrX 112404919 112404959 -54245337 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1442 233 137 0 38 chrX 112405360 112405413 -54244883 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 5 1442 189 132 0 0 chrX 112405431 112405469 -54244827 + (CAGAGA)n Simple_repeat Simple_repeat 3 40 0 5 1442 1071 104 7 7 chrX 112405492 112405647 -54244649 + B2_Mm2 SINE B2 1 155 -40 5 1442 370 36 36 0 chrX 112405647 112405703 -54244593 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 1442 423 0 0 0 chrX 112405703 112405749 -54244547 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1442 6848 138 14 29 chrX 112405895 112407050 -54243246 - Lx3C LINE L1 -57 6919 5783 5 1442 21 0 0 0 chrX 112407063 112407084 -54243212 + AT_rich Low_complexity Low_complexity 1 21 0 5 1442 31 68 0 0 chrX 112407394 112407453 -54242843 + AT_rich Low_complexity Low_complexity 1 59 0 5 1442 340 270 0 0 chrX 112408132 112408221 -54242075 + PB1D10 SINE Alu 27 115 -2 5 1442 516 72 0 0 chrX 112408309 112408378 -54241918 + (TTCC)n Simple_repeat Simple_repeat 1 69 0 5 1442 1164 98 6 6 chrX 112408378 112408552 -54241744 - B2_Mm1t SINE B2 -19 174 1 5 1442 6581 109 42 6 chrX 112408624 112410438 -54239858 - L1VL2 LINE L1 -1789 1826 9 5 1442 2458 153 5 0 chrX 112410441 112410833 -54239463 - L1_Mur1 LINE L1 -88 5798 5405 5 1442 24 0 0 0 chrX 112411684 112411708 -54238588 + AT_rich Low_complexity Low_complexity 1 24 0 5 1442 1785 243 14 24 chrX 112411709 112412126 -54238170 - MTC LTR MaLR -8 413 1 5 1442 241 281 0 0 chrX 112412605 112412669 -54237627 - MLT1A0 LTR MaLR -271 94 31 5 1442 1255 94 5 5 chrX 112412689 112412881 -54237415 - L1_Mus4 LINE L1 -5 6631 6440 5 1442 1787 185 62 3 chrX 112412919 112413272 -54237024 - ORR1C1 LTR MaLR 0 378 5 5 1442 580 320 5 72 chrX 112413483 112413678 -54236618 - B3A SINE B2 0 198 17 5 1442 1203 204 4 8 chrX 112413697 112413949 -54236347 + Lx4A LINE L1 6805 7055 -3 5 1442 22 35 0 0 chrX 112413949 112413978 -54236318 + AT_rich Low_complexity Low_complexity 1 29 0 5 1442 610 307 40 27 chrX 112414070 112414294 -54236002 - Lx5 LINE L1 0 7050 6824 5 1442 2835 98 0 10 chrX 112415211 112415611 -54234685 + MTA_Mm LTR MaLR 1 396 0 5 1442 7172 106 27 3 chrX 112415613 112416683 -54233613 + MTA_Mm-int LTR MaLR 3 1098 0 5 1442 2817 94 10 2 chrX 112416685 112417080 -54233216 + MTA_Mm LTR MaLR 3 400 0 5 1442 276 302 77 8 chrX 112417608 112417725 -54232571 - MIRb SINE MIR -17 251 127 5 1442 193 109 0 42 chrX 112417868 112417916 -54232380 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 5 1442 330 360 32 8 chrX 112418336 112418462 -54231834 - MTEa LTR MaLR -2 377 249 5 1442 264 296 47 0 chrX 112418944 112419116 -54231180 + L1MCa LINE L1 1708 1887 -4621 5 1442 2537 144 21 21 chrX 112419243 112419674 -54230622 + Lx2 LINE L1 6567 6997 0 5 1442 298 202 33 35 chrX 112419703 112419860 -54230436 + L1M1 LINE L1 5367 5538 -651 5 1442 31962 78 5 4 chrX 112419894 112425109 -54225187 + L1Md_F2 LINE L1 275 5589 -297 5 1442 7770 59 4 2 chrX 112425109 112426101 -54224195 + L1Md_F2 LINE L1 5590 6583 -2 5 1442 204 40 0 0 chrX 112426170 112426195 -54224101 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1442 633 278 60 4 chrX 112426328 112426573 -54223723 + L1VL4 LINE L1 464 718 -2842 5 1442 539 212 163 4 chrX 112426559 112426745 -54223551 + Lx4B LINE L1 6702 6986 -72 5 1442 23 0 0 0 chrX 112426762 112426785 -54223511 + AT_rich Low_complexity Low_complexity 1 23 0 5 1442 509 333 16 42 chrX 112426817 112427008 -54223288 - B3A SINE B2 0 198 13 5 1442 1489 150 82 13 chrX 112427022 112427225 -54223071 - L1_Mur2 LINE L1 -1385 4492 4278 5 1442 243 0 0 0 chrX 112427225 112427252 -54223044 + (TTG)n Simple_repeat Simple_repeat 1 27 0 5 1442 1489 150 82 13 chrX 112427252 112427352 -54222944 - L1_Mur2 LINE L1 -1600 4277 4168 5 1442 404 322 77 39 chrX 112427393 112427600 -54222696 + Lx8 LINE L1 6953 7167 -306 5 1442 310 205 12 24 chrX 112427735 112427820 -54222476 - L1M4 LINE L1 -6408 134 51 5 1442 21 36 0 0 chrX 112428617 112428645 -54221651 + AT_rich Low_complexity Low_complexity 1 28 0 6 1442 233 239 0 0 chrX 112428735 112428781 -54221515 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 6 1442 198 0 0 0 chrX 112429317 112429339 -54220957 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 6 1442 532 311 8 8 chrX 112429372 112429533 -54220763 + B4 SINE B4 122 282 -10 6 1442 867 20 0 0 chrX 112429564 112429665 -54220631 + (TATATG)n Simple_repeat Simple_repeat 5 105 0 6 1442 1169 62 7 0 chrX 112430454 112430600 -54219696 + B1_Mus1 SINE Alu 2 148 0 6 1442 1306 185 164 23 chrX 112430701 112431011 -54219285 + ORR1B1 LTR MaLR 41 394 0 6 1442 534 186 141 14 chrX 112431120 112431262 -54219034 + Lx LINE L1 6495 6654 0 6 1442 1568 105 0 57 chrX 112431308 112431570 -54218726 - L1Md_F2 LINE L1 -3 6579 6333 6 1442 30 0 0 0 chrX 112431570 112431600 -54218696 + AT_rich Low_complexity Low_complexity 1 30 0 6 1442 5331 46 89 3 chrX 112431600 112432297 -54217999 - L1Md_F2 LINE L1 -2 6580 5824 6 1442 613 333 2 37 chrX 112432619 112432930 -54217366 - MER47B DNA MER2_type -2110 296 48 6 1442 1631 213 36 3 chrX 112433276 112433605 -54216691 - Lx2B LINE L1 -6 6994 6655 6 1442 7938 70 13 0 chrX 112433603 112434685 -54215611 - L1_Mm LINE L1 -2469 3414 2319 6 1442 464 228 62 23 chrX 112434722 112434852 -54215444 + RLTR9E LTR ERVK 274 408 -1 6 1442 319 278 11 11 chrX 112435274 112435365 -54214931 - ID_B1 SINE B4 -10 214 124 6 1442 22 35 0 0 chrX 112435621 112435650 -54214646 + AT_rich Low_complexity Low_complexity 1 29 0 6 1442 268 320 113 0 chrX 112436538 112436688 -54213608 - Lx8 LINE L1 -23 7450 7284 6 1442 669 342 9 9 chrX 112436690 112436914 -54213382 - Lx8 LINE L1 -151 7322 7099 6 1442 558 157 39 0 chrX 112436914 112437016 -54213280 - Lx5 LINE L1 -1130 5920 5815 6 1442 4500 243 36 27 chrX 112437009 112438145 -54212151 + Lx5 LINE L1 5903 7048 -2 6 1442 1422 317 42 36 chrX 112438240 112438878 -54211418 - Lx8 LINE L1 -431 7042 6401 6 1442 814 228 29 53 chrX 112438849 112439057 -54211239 + Lx4B LINE L1 6850 7052 -6 6 1442 456 256 14 35 chrX 112439083 112439225 -54211071 - Lx8 LINE L1 -1033 6440 6302 6 1442 28 86 0 0 chrX 112439366 112439436 -54210860 + AT_rich Low_complexity Low_complexity 1 70 0 6 1442 25 75 0 0 chrX 112441441 112441494 -54208802 + AT_rich Low_complexity Low_complexity 1 53 0 6 1442 358 366 107 15 chrX 112442632 112442829 -54207467 - B4A SINE B4 -75 217 3 6 1442 426 275 64 9 chrX 112442994 112443104 -54207192 - B4A SINE B4 -10 282 167 6 1442 487 281 7 54 chrX 112443416 112443563 -54206733 + ID_B1 SINE B4 79 218 -6 6 1442 968 266 80 69 chrX 112444284 112444564 -54205732 - MTD LTR MaLR -14 405 122 6 1442 219 69 0 0 chrX 112444564 112444593 -54205703 + (CAA)n Simple_repeat Simple_repeat 2 30 0 6 1442 968 266 80 69 chrX 112444593 112444687 -54205609 - MTD LTR MaLR -298 121 28 6 1442 3915 82 2 4 chrX 112444701 112445228 -54205068 + L1_Mus2 LINE L1 6039 6564 -2 6 1442 231 179 36 0 chrX 112447412 112447468 -54202828 + (CAAA)n Simple_repeat Simple_repeat 3 60 0 6 1442 360 0 0 0 chrX 112448117 112448157 -54202139 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1442 387 371 23 8 chrX 112448161 112448294 -54202002 - B3 SINE B2 -34 182 48 6 1442 22 0 0 0 chrX 112448384 112448406 -54201890 + AT_rich Low_complexity Low_complexity 1 22 0 6 1442 23 0 0 0 chrX 112448836 112448859 -54201437 + AT_rich Low_complexity Low_complexity 1 23 0 6 1442 32 26 0 0 chrX 112449606 112449645 -54200651 + AT_rich Low_complexity Low_complexity 1 39 0 6 1442 715 242 0 32 chrX 112449677 112449831 -54200465 - B1_Mur2 SINE Alu 0 149 1 6 1442 353 39 0 19 chrX 112451195 112451247 -54199049 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 6 1442 906 76 15 0 chrX 112451438 112451570 -54198726 + L1_Mus2 LINE L1 6433 6566 0 6 1442 2940 157 122 15 chrX 112452829 112453372 -54196924 - MT2B LTR ERVL 0 601 1 6 1442 1879 118 19 19 chrX 112454078 112454383 -54195913 - RMER6A LTR ERVK -37 719 415 6 1442 675 208 252 53 chrX 112454383 112454766 -54195530 - RMER6B LTR ERVK -2 459 1 6 1442 261 172 21 32 chrX 112454766 112454840 -54195456 - RMER6A LTR ERVK -273 447 360 6 1442 22 0 0 0 chrX 112455632 112455654 -54194642 + AT_rich Low_complexity Low_complexity 1 22 0 6 1442 25 31 0 0 chrX 112455937 112455969 -54194327 + AT_rich Low_complexity Low_complexity 1 32 0 6 1442 259 244 24 49 chrX 112456899 112456981 -54193315 - ID4_ SINE ID 0 83 4 6 1442 440 84 48 0 chrX 112456983 112457066 -54193230 + (TA)n Simple_repeat Simple_repeat 2 88 0 6 1442 369 0 0 0 chrX 112457145 112457186 -54193110 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1442 531 43 0 0 chrX 112458114 112458184 -54192112 + (GA)n Simple_repeat Simple_repeat 1 70 0 6 1442 228 122 0 0 chrX 112458889 112458930 -54191366 + (A)n Simple_repeat Simple_repeat 1 41 0 6 1442 1139 225 164 12 chrX 112459303 112459627 -54190669 + MTE2a LTR MaLR 5 377 -2 6 1443 21 0 0 0 chrX 112460370 112460391 -54189905 + AT_rich Low_complexity Low_complexity 1 21 0 6 1443 980 101 13 0 chrX 112460814 112460963 -54189333 + L1_Mus3 LINE L1 6474 6624 -14 6 1443 539 217 0 6 chrX 112461497 112461655 -54188641 + CT-rich Low_complexity Low_complexity 2 158 0 6 1443 483 18 0 0 chrX 112462042 112462098 -54188198 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 1443 505 332 107 16 chrX 112464548 112464790 -54185506 - Lx8 LINE L1 -133 7340 7077 6 1443 2505 262 40 12 chrX 112464831 112465480 -54184816 - Lx6 LINE L1 0 7460 6794 6 1443 2290 188 119 15 chrX 112466174 112466704 -54183592 + RMER4B LTR ERVK 1 585 0 6 1443 1935 187 45 5 chrX 112466806 112467183 -54183113 - Lx4A LINE L1 -209 6849 6458 6 1443 5462 194 31 24 chrX 112467182 112467693 -54182603 - L1_Mur2 LINE L1 -3397 2480 1994 6 1443 2886 57 39 10 chrX 112467693 112468082 -54182214 - MTB LTR MaLR 0 400 1 6 1443 5462 192 25 17 chrX 112468082 112468959 -54181337 - L1_Mur2 LINE L1 -3884 1993 1081 6 1443 252 0 0 0 chrX 112468959 112468987 -54181309 + (TTA)n Simple_repeat Simple_repeat 2 29 0 6 1443 2006 179 22 71 chrX 112468992 112469443 -54180853 - Lx3C LINE L1 -7 6969 6541 6 1443 611 244 13 90 chrX 112469438 112469672 -54180624 - L1_Mur2 LINE L1 -5989 1097 882 6 1443 588 116 142 9 chrX 112470779 112470892 -54179404 + Lx LINE L1 6293 6420 -234 6 1443 312 34 0 63 chrX 112470892 112470955 -54179341 + L1_Mus4 LINE L1 6578 6636 0 6 1443 346 379 7 33 chrX 112472372 112472642 -54177654 + Lx8 LINE L1 7200 7462 -11 6 1443 2433 93 45 45 chrX 112472670 112473074 -54177222 - RLTR9E LTR ERVK 0 409 6 6 1443 6339 112 5 5 chrX 112473954 112474898 -54175398 + Lx3A LINE L1 6038 6981 0 6 1443 372 240 0 0 chrX 112475252 112475352 -54174944 + (TA)n Simple_repeat Simple_repeat 1 100 0 6 1443 189 147 0 0 chrX 112475393 112475427 -54174869 + (GA)n Simple_repeat Simple_repeat 2 35 0 6 1443 259 325 48 0 chrX 112475488 112475571 -54174725 - Lx8 LINE L1 -172 7301 7215 6 1443 268 389 46 0 chrX 112475711 112475819 -54174477 - PB1D9 SINE Alu -7 113 1 6 1443 24 0 0 0 chrX 112475822 112475846 -54174450 + AT_rich Low_complexity Low_complexity 1 24 0 6 1443 726 12 0 0 chrX 112475905 112475988 -54174308 + (TA)n Simple_repeat Simple_repeat 2 84 0 6 1443 10886 116 7 7 chrX 112476129 112476219 -54174077 + L1_Mus1 LINE L1 4230 4321 -1562 6 1443 6410 56 11 0 chrX 112476219 112477018 -54173278 - RLTR13C2 LTR ERVK 0 808 1 6 1443 10886 101 6 5 chrX 112477018 112479262 -54171034 + L1_Mus1 LINE L1 4322 6566 -1 6 1443 248 77 26 0 chrX 112479281 112479320 -54170976 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 6 1443 188 86 29 0 chrX 112479415 112479450 -54170846 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 6 1443 309 266 0 0 chrX 112480296 112480360 -54169936 + PB1D7 SINE Alu 2 65 -55 6 1443 432 265 31 0 chrX 112480303 112480401 -54169895 + ID_B1 SINE B4 90 190 -34 6 1443 2092 268 34 25 chrX 112480904 112481544 -54168752 - Lx7 LINE L1 -1102 6594 5949 6 1443 688 110 0 27 chrX 112481544 112481656 -54168640 + RMER17A2 LTR ERVK 1 109 -797 6 1443 945 117 0 14 chrX 112481651 112481798 -54168498 + RMER17A2 LTR ERVK 429 573 -333 6 1443 10212 115 58 6 chrX 112481799 112482263 -54168033 + Lx3A LINE L1 4163 4632 -1254 6 1443 388 40 26 39 chrX 112482263 112482341 -54167955 + (CAAA)n Simple_repeat Simple_repeat 2 78 0 6 1443 10212 115 58 6 chrX 112482341 112482356 -54167940 + Lx3A LINE L1 4633 4651 -1235 6 1443 1270 116 11 0 chrX 112482356 112482545 -54167751 - B2_Mm1t SINE B2 -2 191 1 6 1443 10212 147 89 6 chrX 112482545 112484664 -54165632 + Lx3A LINE L1 4652 6973 -8 6 1443 656 241 7 60 chrX 112484685 112484920 -54165376 - Lx7 LINE L1 -134 7562 7367 6 1443 822 331 72 30 chrX 112485397 112485702 -54164594 + MTEa LTR MaLR 58 375 -4 6 1443 3645 121 50 91 chrX 112485720 112486503 -54163793 + RMER17A LTR ERVK 1 751 0 6 1443 410 186 0 0 chrX 112487503 112487573 -54162723 - U4 snRNA snRNA -75 70 1 6 1443 655 195 17 0 chrX 112487598 112487716 -54162580 + URR1A DNA MER1_type 7 126 -100 6 1443 2333 42 0 3 chrX 112487908 112488193 -54162103 + L1Md_F3 LINE L1 6284 6567 -17 6 1443 1008 242 36 32 chrX 112488449 112488701 -54161595 + ORR1C1 LTR MaLR 1 253 -125 6 1443 1875 165 39 111 chrX 112488960 112489490 -54160806 - BGLII_B LTR ERVK -7 434 3 6 1443 456 214 16 71 chrX 112489490 112489603 -54160693 + ORR1C1 LTR MaLR 267 372 -12 6 1443 261 83 0 0 chrX 112489870 112489906 -54160390 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1443 510 46 0 0 chrX 112489908 112489973 -54160323 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 6 1443 27 0 0 0 chrX 112490045 112490072 -54160224 + AT_rich Low_complexity Low_complexity 1 27 0 6 1443 413 245 56 9 chrX 112490128 112490235 -54160061 - B3A SINE B2 -83 115 4 6 1443 1239 237 18 25 chrX 112490369 112490534 -54159762 - RMER15 LTR ERVL 0 575 338 6 1443 315 0 0 0 chrX 112490534 112490569 -54159727 + (TAA)n Simple_repeat Simple_repeat 1 35 0 6 1443 1239 244 116 12 chrX 112490569 112490875 -54159421 - RMER15 LTR ERVL -238 337 1 6 1443 5527 103 19 10 chrX 112491099 112491921 -54158375 + Lx3_Mus LINE L1 6172 7001 -8 6 1443 1269 318 27 10 chrX 112491927 112492407 -54157889 + Lx9 LINE L1 6462 6949 -695 6 1443 1658 183 12 59 chrX 112492407 112492744 -54157552 + ORR1A4 LTR MaLR 1 321 -8 7 1443 509 371 18 7 chrX 112492773 112493117 -54157179 + Lx9 LINE L1 6827 7301 -343 7 1443 295 227 146 51 chrX 112493153 112493311 -54156985 + Lx9 LINE L1 7407 7579 -65 7 1443 4579 40 0 0 chrX 112493675 112494218 -54156078 + L1Md_F2 LINE L1 6026 6568 -14 7 1443 444 19 0 0 chrX 112495035 112495088 -54155208 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1443 283 352 9 45 chrX 112495231 112495341 -54154955 - B4 SINE B4 -24 268 163 7 1443 1673 288 77 52 chrX 112495468 112495679 -54154617 - Lx8 LINE L1 -10 7463 7234 7 1443 294 29 0 0 chrX 112495679 112495714 -54154582 + (ATG)n Simple_repeat Simple_repeat 2 36 0 7 1443 1673 288 77 52 chrX 112495714 112496188 -54154108 - Lx8 LINE L1 -240 7233 6761 7 1443 918 92 20 72 chrX 112496187 112496340 -54153956 - Lx3_Mus LINE L1 -291 6718 6574 7 1443 7413 107 58 19 chrX 112496305 112498048 -54152248 + Lx3_Mus LINE L1 5178 7001 -8 7 1443 11647 9 0 0 chrX 112498051 112500000 -54150296 + L1Md_A LINE L1 8 1956 -3927 7 1443 31908 5 0 0 chrX 112500000 112503630 -54146666 + L1Md_A LINE L1 1957 5586 -297 1 1443 9024 2 0 0 chrX 112503630 112504626 -54145670 + L1Md_A LINE L1 5587 6582 0 1 1443 633 344 69 39 chrX 112504945 112505205 -54145091 + B4A SINE B4 5 272 -20 2 1443 333 100 0 0 chrX 112505213 112505263 -54145033 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1443 186 82 60 20 chrX 112505322 112505372 -54144924 + A-rich Low_complexity Low_complexity 4 55 0 4 1443 324 245 90 174 chrX 112505469 112505647 -54144649 - RSINE1 SINE B4 0 165 3 5 1443 1209 307 38 0 chrX 112505832 112506171 -54144125 + MT2A LTR ERVL 110 461 -72 6 1443 402 21 0 0 chrX 112506176 112506223 -54144073 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 1443 23 0 0 0 chrX 112506327 112506350 -54143946 + AT_rich Low_complexity Low_complexity 1 23 0 8 1443 199 384 30 10 chrX 112506908 112507008 -54143288 - MIR SINE MIR -124 138 37 9 1443 219 379 47 42 chrX 112507151 112507363 -54142933 - MIRb SINE MIR -36 232 20 1 1443 191 289 58 0 chrX 112507376 112507428 -54142868 + L2a LINE L2 3368 3422 -4 1 1443 226 360 53 20 chrX 112508068 112508218 -54142078 - MIRb SINE MIR -16 252 98 1 1443 252 65 22 0 chrX 112508354 112508400 -54141896 - L1Md_T LINE L1 -2 6580 6534 1 1443 333 68 0 0 chrX 112508518 112508562 -54141734 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1443 431 333 33 0 chrX 112508627 112508780 -54141516 - B3 SINE B2 0 216 59 1 1443 213 240 0 0 chrX 112508912 112508962 -54141334 - B3A SINE B2 -148 50 1 1 1443 726 289 36 9 chrX 112508963 112509183 -54141113 - B4 SINE B4 -62 230 5 1 1443 225 250 33 67 chrX 112509222 112509282 -54141014 + ID4_ SINE ID 5 62 -21 1 1443 23 33 0 0 chrX 112509452 112509482 -54140814 + AT_rich Low_complexity Low_complexity 1 30 0 1 1443 441 54 0 0 chrX 112509679 112509735 -54140561 + (CCA)n Simple_repeat Simple_repeat 1 56 0 1 1443 200 176 0 0 chrX 112509735 112509769 -54140527 + (CAA)n Simple_repeat Simple_repeat 3 36 0 2 1443 21 36 0 0 chrX 112510592 112510620 -54139676 + AT_rich Low_complexity Low_complexity 1 28 0 2 1443 366 347 85 27 chrX 112510977 112511235 -54139061 + B4A SINE B4 2 274 -18 2 1443 219 69 0 0 chrX 112511259 112511288 -54139008 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1443 1247 246 42 51 chrX 112511856 112512420 -54137876 + L1M2 LINE L1 4874 5436 -748 2 1443 477 336 0 58 chrX 112513336 112513491 -54136805 + RSINE1 SINE B4 1 146 -19 2 1443 1104 101 0 0 chrX 112513652 112513800 -54136496 + B1_Mus1 SINE Alu 1 148 0 2 1443 229 26 26 26 chrX 112513802 112513841 -54136455 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 2 1443 558 0 0 0 chrX 112513843 112513905 -54136391 + (GA)n Simple_repeat Simple_repeat 2 63 0 2 1443 245 409 23 0 chrX 112514353 112514485 -54135811 - LTR33A_ LTR ERVL -111 420 286 2 1443 434 255 10 31 chrX 112515055 112515152 -54135144 + B1_Mur2 SINE Alu 5 99 -50 3 1443 250 374 7 61 chrX 112515152 112515199 -54135097 + ID_B1 SINE B4 86 221 -3 3 1443 358 274 53 22 chrX 112515739 112516017 -54134279 + L1ME1 LINE L1 5695 5977 -207 3 1443 192 152 0 0 chrX 112516200 112516233 -54134063 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 1443 359 250 43 21 chrX 112516240 112516334 -54133962 - B3A SINE B2 -95 103 8 3 1443 2670 147 0 0 chrX 112516376 112516812 -54133484 - L1_Mm LINE L1 -800 5083 4648 3 1443 7383 80 9 1 chrX 112516808 112518010 -54132286 + L1_Mus1 LINE L1 5363 6654 0 3 1443 4512 66 0 28 chrX 112519542 112520152 -54130144 - L1Md_F2 LINE L1 -2 6580 5988 3 1443 2868 46 0 0 chrX 112520152 112520502 -54129794 + L1Md_F2 LINE L1 5665 6014 -568 3 1443 1121 88 0 0 chrX 112521287 112521434 -54128862 + B1_Mm SINE Alu 1 147 0 3 1443 33 0 0 0 chrX 112521434 112521467 -54128829 + AT_rich Low_complexity Low_complexity 1 33 0 3 1443 25 31 0 0 chrX 112522219 112522251 -54128045 + AT_rich Low_complexity Low_complexity 1 32 0 4 1443 5122 88 1 1 chrX 112522257 112522950 -54127346 - L1Md_F2 LINE L1 -13 6569 5877 4 1443 2975 86 0 0 chrX 112522960 112523367 -54126929 + L1_Mm LINE L1 4637 5043 -840 4 1443 2258 50 4 0 chrX 112523373 112523653 -54126643 - L1_Mus1 LINE L1 -1 6566 6286 4 1443 227 353 65 20 chrX 112523667 112523820 -54126476 + B4A SINE B4 28 187 -105 4 1443 309 263 100 82 chrX 112524073 112524243 -54126053 + B4A SINE B4 120 292 0 4 1443 4873 117 8 3 chrX 112524868 112525591 -54124705 + L1_Mus3 LINE L1 5912 6638 0 4 1443 278 302 73 57 chrX 112525652 112525898 -54124398 - L1M2 LINE L1 -922 5218 4969 4 1443 632 307 57 48 chrX 112525914 112526054 -54124242 - Lx8 LINE L1 0 7473 7342 4 1443 3036 47 0 6 chrX 112526054 112526420 -54123876 - RLTR10B2 LTR ERVK -1 364 1 4 1443 632 307 57 48 chrX 112526420 112526594 -54123702 - Lx8 LINE L1 -132 7341 7157 4 1443 652 332 106 34 chrX 112526597 112527069 -54123227 - L1M2 LINE L1 -1170 4973 4468 4 1443 198 103 0 0 chrX 112527069 112527098 -54123198 + (TATATG)n Simple_repeat Simple_repeat 2 30 0 5 1443 652 332 106 34 chrX 112527098 112527274 -54123022 - L1M2 LINE L1 -1676 4467 4278 4 1443 44 49 0 12 chrX 112527497 112527528 -54122768 + AT_rich Low_complexity Low_complexity 1 31 0 5 1443 2746 163 19 8 chrX 112527528 112528047 -54122249 - Lx4A LINE L1 -1 7057 6533 5 1443 44 49 0 12 chrX 112528047 112528098 -54122198 + AT_rich Low_complexity Low_complexity 1 51 0 5 1443 35521 47 0 3 chrX 112528130 112533635 -54116661 + L1Md_T LINE L1 6 5589 -297 5 1443 8421 33 0 0 chrX 112533635 112534631 -54115665 + L1Md_T LINE L1 5590 6585 0 5 1443 570 29 0 0 chrX 112534706 112534774 -54115522 + (CATA)n Simple_repeat Simple_repeat 4 71 0 5 1443 273 221 0 0 chrX 112534914 112534982 -54115314 + GA-rich Low_complexity Low_complexity 2 69 0 5 1443 239 250 0 0 chrX 112535186 112535246 -54115050 + T-rich Low_complexity Low_complexity 1 60 0 5 1443 21 0 0 0 chrX 112535544 112535565 -54114731 + AT_rich Low_complexity Low_complexity 1 21 0 5 1443 391 311 33 14 chrX 112536007 112536222 -54114074 - L1M1 LINE L1 -705 5598 5380 5 1443 366 289 43 78 chrX 112536336 112536591 -54113705 + L1MA4 LINE L1 5688 5933 -367 6 1443 207 69 0 0 chrX 112536604 112536633 -54113663 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1443 218 306 0 0 chrX 112536766 112536815 -54113481 + RSINE1 SINE B4 11 59 -106 6 1443 22 0 0 0 chrX 112537822 112537844 -54112452 + AT_rich Low_complexity Low_complexity 1 22 0 6 1443 931 241 9 9 chrX 112538233 112538459 -54111837 - URR1A DNA MER1_type 0 226 1 6 1443 273 214 129 30 chrX 112538752 112538853 -54111443 + MLT1A LTR MaLR 5 115 -259 6 1443 2924 58 0 0 chrX 112539288 112539812 -54110484 - L1_Mus1 LINE L1 0 6567 6197 6 1443 639 84 0 0 chrX 112540165 112540260 -54110036 + (CA)n Simple_repeat Simple_repeat 2 96 0 6 1443 378 299 90 69 chrX 112540273 112540330 -54109966 - L1_Mur2 LINE L1 -63 5784 5718 6 1443 288 0 0 0 chrX 112540330 112540362 -54109934 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 1443 464 263 79 70 chrX 112540362 112540637 -54109659 - L1_Mur2 LINE L1 -146 5734 5476 6 1443 861 238 70 15 chrX 112540657 112540979 -54109317 - ORR1B1 LTR MaLR -8 319 1 7 1443 437 277 62 26 chrX 112541009 112541235 -54109061 - L1_Mur2 LINE L1 -479 5401 5168 6 1443 31 44 0 0 chrX 112541262 112541307 -54108989 + AT_rich Low_complexity Low_complexity 1 45 0 7 1443 33983 70 3 28 chrX 112542121 112544419 -54105877 - L1Md_F2 LINE L1 -1 6581 4424 7 1443 4866 66 2 6 chrX 112544419 112545061 -54105235 - L1Md_F2 LINE L1 0 6582 5944 7 1443 33983 82 6 35 chrX 112545061 112549056 -54101240 - L1Md_F2 LINE L1 -1460 4423 469 7 1443 808 117 33 0 chrX 112549180 112549300 -54100996 - MT2C_Mm LTR ERVL -62 413 290 7 1443 794 107 0 0 chrX 112549331 112549452 -54100844 - RLTR9F LTR ERVK -294 121 1 7 1443 4073 167 19 29 chrX 112549726 112550636 -54099660 - ETnERV2-int LTR ERVK -982 6424 5579 7 1443 9150 143 72 21 chrX 112550626 112552679 -54097617 - ETnERV2-int LTR ERVK -3308 4098 985 7 1443 293 47 0 23 chrX 112552679 112552723 -54097573 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 7 1443 6788 110 81 21 chrX 112552723 112553214 -54097082 - ETnERV2-int LTR ERVK -4422 984 465 7 1443 567 0 0 0 chrX 112553214 112553277 -54097019 + (TTTTA)n Simple_repeat Simple_repeat 4 66 0 7 1443 5309 110 81 21 chrX 112553277 112553297 -54096999 - RLTR45-int LTR ERVK -5150 2094 2076 7 1443 691 272 55 65 chrX 112553285 112553592 -54096704 - ETnERV2-int LTR ERVK -3008 306 3 7 1443 1857 166 60 22 chrX 112553594 112553994 -54096302 - RLTR9F LTR ERVK 0 415 1 7 1443 22 94 0 0 chrX 112555196 112555260 -54095036 + AT_rich Low_complexity Low_complexity 1 64 0 8 1443 204 261 0 0 chrX 112556066 112556112 -54094184 + T-rich Low_complexity Low_complexity 1 46 0 8 1443 243 48 30 61 chrX 112556620 112556686 -54093610 + (CAAAAA)n Simple_repeat Simple_repeat 3 66 0 8 1443 234 0 0 0 chrX 112556847 112556873 -54093423 + (A)n Simple_repeat Simple_repeat 1 26 0 8 1443 287 181 0 14 chrX 112557024 112557097 -54093199 + CT-rich Low_complexity Low_complexity 2 73 0 8 1443 213 175 0 0 chrX 112558079 112558119 -54092177 + (CAT)n Simple_repeat Simple_repeat 2 41 0 8 1443 444 320 8 8 chrX 112558299 112558425 -54091871 + RSINE1 SINE B4 3 128 -37 8 1443 1419 296 57 37 chrX 112558856 112559397 -54090899 - Lx9 LINE L1 -215 7429 6878 8 1443 23 33 0 0 chrX 112559466 112559496 -54090800 + AT_rich Low_complexity Low_complexity 1 30 0 8 1443 212 320 9 65 chrX 112559520 112559589 -54090707 + PB1D10 SINE Alu 10 78 -39 8 1443 1870 143 24 59 chrX 112559589 112559930 -54090366 - ORR1A4 LTR MaLR 0 329 1 9 1443 212 320 9 65 chrX 112559930 112559967 -54090329 + PB1D10 SINE Alu 79 110 -7 8 1443 21 36 0 0 chrX 112560366 112560394 -54089902 + AT_rich Low_complexity Low_complexity 1 28 0 9 1443 343 65 48 0 chrX 112560625 112560687 -54089609 + (TTTTG)n Simple_repeat Simple_repeat 1 65 0 9 1443 1327 237 63 28 chrX 112560757 112561121 -54089175 - ORR1C1 LTR MaLR -1 377 1 9 1443 264 298 145 28 chrX 112561236 112561381 -54088915 - MLT2D LTR ERVL -41 373 212 9 1443 961 341 62 72 chrX 112561547 112562243 -54088053 - Lx8 LINE L1 -181 7292 6604 9 1443 624 341 33 6 chrX 112562249 112562432 -54087864 - B3 SINE B2 -12 204 17 9 1443 209 327 9 9 chrX 112562814 112562925 -54087371 + (TTTA)n Simple_repeat Simple_repeat 1 111 0 9 1443 33016 78 1 5 chrX 112565030 112566371 -54083925 - L1Md_F2 LINE L1 0 6582 5244 9 1443 243 0 0 0 chrX 112566371 112566398 -54083898 + (TA)n Simple_repeat Simple_repeat 2 28 0 9 1443 33016 95 13 5 chrX 112566398 112571256 -54079040 - L1Md_F2 LINE L1 -640 5243 351 9 1443 396 351 449 9 chrX 112571520 112571735 -54078561 - MLT1G LTR MaLR -273 318 9 1 1443 248 222 32 0 chrX 112572164 112572227 -54078069 + (TATATG)n Simple_repeat Simple_repeat 6 70 0 1 1443 1751 213 18 16 chrX 112573562 112573948 -54076348 - ORR1B1 LTR MaLR -3 391 5 1 1443 524 317 0 14 chrX 112573954 112574095 -54076201 - B4 SINE B4 -23 269 131 1 1443 664 249 272 4 chrX 112574096 112574346 -54075950 - Lx2B LINE L1 -167 6833 6517 1 1443 373 205 128 0 chrX 112574351 112574429 -54075867 + 5S rRNA rRNA 7 94 -27 1 1443 22 35 0 0 chrX 112574431 112574460 -54075836 + AT_rich Low_complexity Low_complexity 1 29 0 1 1443 936 108 0 0 chrX 112574509 112574648 -54075648 + (TTTC)n Simple_repeat Simple_repeat 2 140 0 1 1443 2765 224 30 19 chrX 112574734 112575324 -54074972 - RMER1B Other Other -5 1061 465 1 1443 582 321 19 44 chrX 112575483 112575688 -54074608 - B3A SINE B2 0 216 17 1 1443 4393 27 4 0 chrX 112576046 112576562 -54073734 - L1Md_F2 LINE L1 -3 6579 6062 1 1443 432 0 0 0 chrX 112577721 112577769 -54072527 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1443 279 0 0 0 chrX 112577769 112577799 -54072497 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1443 28 29 0 0 chrX 112577822 112577857 -54072439 + AT_rich Low_complexity Low_complexity 1 35 0 1 1443 567 253 11 51 chrX 112578044 112578219 -54072077 + Tigger5 DNA MER2_type 2127 2294 -112 1 1443 7568 200 68 19 chrX 112578226 112579615 -54070681 - L1_Mur2 LINE L1 -476 5401 3968 1 1443 315 0 0 0 chrX 112579615 112579650 -54070646 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1443 7568 200 68 19 chrX 112579650 112580149 -54070147 - L1_Mur2 LINE L1 -1910 3967 3421 1 1443 1792 195 88 110 chrX 112580139 112580785 -54069511 - L1_Mur2 LINE L1 -3666 2211 1580 1 1443 1986 264 15 44 chrX 112580786 112581585 -54068711 + L1_Mur1 LINE L1 457 1026 -5958 1 1443 6409 17 1 0 chrX 112581582 112582507 -54067789 - L1Md_T LINE L1 -503 6079 5153 1 1443 4051 39 2 0 chrX 112582507 112582992 -54067304 + L1Md_T LINE L1 6097 6582 0 1 1443 3086 120 3 6 chrX 112583001 112583729 -54066567 + L1_Mur1 LINE L1 1017 1741 -4145 1 1443 3320 137 3 15 chrX 112583724 112584323 -54065973 + L1_Mur1 LINE L1 3000 3591 -2295 1 1443 467 344 36 12 chrX 112587117 112587282 -54063014 + B4A SINE B4 5 173 -119 1 1443 18650 176 24 35 chrX 112588142 112589226 -54061070 + L1VL4 LINE L1 552 1617 -4269 1 1443 975 130 0 14 chrX 112589226 112589374 -54060922 + B1_Mm SINE Alu 2 147 0 1 180 18650 191 28 15 chrX 112589374 112591572 -54058724 + L1VL4 LINE L1 1618 3845 -2041 1 1444 248 53 26 0 chrX 112591572 112591610 -54058686 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1444 18650 191 28 15 chrX 112591610 112593044 -54057252 + L1VL4 LINE L1 3846 5305 -581 1 1444 3368 172 12 10 chrX 112593042 112594225 -54056071 + L1VL4 LINE L1 191 1378 -2181 1 1444 7017 131 7 3 chrX 112594212 112595574 -54054722 + L1_Mus4 LINE L1 5269 6636 0 1 1444 391 46 46 0 chrX 112595578 112595643 -54054653 + (CAAA)n Simple_repeat Simple_repeat 1 68 0 1 1444 7293 96 2 16 chrX 112595649 112596954 -54053342 + L1_Mus2 LINE L1 5294 6565 -1 1 1444 816 175 11 11 chrX 112597100 112597285 -54053011 + L1_Mur2 LINE L1 2876 3060 -2817 1 1444 746 256 30 39 chrX 112597283 112597486 -54052810 + Lx5 LINE L1 6715 6915 -135 1 1444 565 135 16 0 chrX 112597563 112597689 -54052607 + GA-rich Low_complexity Low_complexity 2 129 0 1 1444 279 0 0 0 chrX 112597689 112597720 -54052576 + (GGA)n Simple_repeat Simple_repeat 2 32 0 1 1444 6263 205 34 17 chrX 112597750 112599298 -54050998 - Lx5 LINE L1 -3 7047 5463 1 1444 2881 95 2 15 chrX 112599830 112600235 -54050061 + MTB LTR MaLR 1 400 0 1 1444 388 343 7 21 chrX 112600362 112600502 -54049794 + RSINE1 SINE B4 3 140 -25 1 1444 841 76 15 0 chrX 112600503 112600634 -54049662 + (CA)n Simple_repeat Simple_repeat 1 133 0 1 1444 348 364 0 0 chrX 112601378 112601518 -54048778 - B1F SINE Alu -7 142 3 1 1444 1046 347 77 43 chrX 112601883 112602403 -54047893 + Lx8 LINE L1 6266 6805 -668 1 1444 1650 159 42 68 chrX 112602403 112602740 -54047556 - ORR1A4 LTR MaLR 0 329 2 1 1444 1046 347 77 43 chrX 112602740 112602935 -54047361 + Lx8 LINE L1 6806 7005 -468 1 1444 3430 104 10 0 chrX 112602969 112603449 -54046847 + Lx3_Mus LINE L1 6525 7009 0 1 1444 22 0 0 0 chrX 112603449 112603471 -54046825 + AT_rich Low_complexity Low_complexity 1 22 0 1 1444 279 310 0 35 chrX 112603471 112603558 -54046738 + Lx8 LINE L1 7239 7322 -151 1 1444 343 294 50 16 chrX 112603727 112603848 -54046448 + RMER5 LTR ERV1 366 490 -44 1 1444 452 308 62 0 chrX 112603962 112604092 -54046204 + RSINE1 SINE B4 25 162 -3 1 1444 25 90 0 0 chrX 112604113 112604180 -54046116 + AT_rich Low_complexity Low_complexity 1 67 0 1 1444 370 152 0 21 chrX 112604182 112604276 -54046020 + (TA)n Simple_repeat Simple_repeat 2 93 0 1 1444 210 287 0 0 chrX 112604444 112604587 -54045709 + (TG)n Simple_repeat Simple_repeat 2 144 0 1 1444 243 246 33 67 chrX 112605674 112605808 -54044488 + Lx7 LINE L1 7578 7692 -4 1 1444 3603 63 15 0 chrX 112605924 112606385 -54043911 - L1_Mus1 LINE L1 -1 6566 6099 1 1444 1410 56 6 0 chrX 112606511 112606691 -54043605 + L1_Mus1 LINE L1 6386 6566 -1 1 1444 586 390 72 6 chrX 112606853 112607173 -54043123 - Lx8 LINE L1 -113 7360 7020 1 1444 213 159 0 0 chrX 112607585 112607629 -54042667 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1444 192 77 0 0 chrX 112607630 112607656 -54042640 + (GA)n Simple_repeat Simple_repeat 2 27 0 1 1444 599 313 108 4 chrX 112607793 112608024 -54042272 - MLT2B1 LTR ERVL -261 259 5 1 1444 287 319 105 9 chrX 112608131 112608245 -54042051 + MIRb SINE MIR 129 253 -15 1 1444 19264 22 0 0 chrX 112608710 112610963 -54039333 + L1Md_T LINE L1 3334 5586 -297 1 1444 8906 9 0 0 chrX 112610963 112611959 -54038337 + L1Md_T LINE L1 5587 6582 0 1 1444 234 0 0 0 chrX 112612276 112612302 -54037994 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1444 23 0 0 0 chrX 112612875 112612898 -54037398 + AT_rich Low_complexity Low_complexity 1 23 0 1 1444 228 312 102 19 chrX 112613080 112613237 -54037059 + L1MC3 LINE L1 7335 7504 -281 1 1444 342 0 0 0 chrX 112613242 112613280 -54037016 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1444 389 130 148 5 chrX 112613408 112613491 -54036805 + RMER6C LTR ERVK 1 93 -627 1 1444 25 31 0 0 chrX 112614317 112614349 -54035947 + AT_rich Low_complexity Low_complexity 1 32 0 1 1444 346 126 46 0 chrX 112614369 112614456 -54035840 + (TCTCTG)n Simple_repeat Simple_repeat 6 96 0 1 1444 587 287 36 26 chrX 112614461 112614654 -54035642 - B3A SINE B2 -2 196 2 1 1444 242 227 18 3 chrX 112614985 112615041 -54035255 + PB1 SINE Alu 9 63 -54 1 1444 21 57 0 0 chrX 112615195 112615230 -54035066 + AT_rich Low_complexity Low_complexity 1 35 0 1 1444 10498 122 6 16 chrX 112615888 112618043 -54032253 + L1VL4 LINE L1 468 2599 -960 1 1444 5828 171 39 8 chrX 112618049 112618202 -54032094 + L1_Mm LINE L1 4374 4524 -1359 1 1444 2800 111 17 0 chrX 112618202 112618616 -54031680 - BGLII LTR ERVK 0 421 1 1 1444 5828 171 39 8 chrX 112618616 112619568 -54030728 + L1_Mm LINE L1 4525 5513 -370 1 1444 423 97 0 0 chrX 112619612 112619674 -54030622 - URR1B DNA MER1_type 0 225 164 1 1444 212 303 143 13 chrX 112619902 112619979 -54030317 + B4A SINE B4 66 152 -140 1 1444 690 225 14 7 chrX 112619914 112620057 -54030239 + B1_Mus1 SINE Alu 5 148 0 1 1444 838 246 6 6 chrX 112620224 112620392 -54029904 - URR1B DNA MER1_type -55 170 3 1 1444 6833 171 61 15 chrX 112620430 112622401 -54027895 - L1VL2 LINE L1 -1400 2215 135 1 1444 552 250 0 68 chrX 112622405 112622551 -54027745 - L1VL2 LINE L1 -5919 416 281 1 1444 21 0 0 0 chrX 112622639 112622660 -54027636 + AT_rich Low_complexity Low_complexity 1 21 0 1 1444 26 64 0 0 chrX 112623014 112623061 -54027235 + AT_rich Low_complexity Low_complexity 1 47 0 1 1444 364 321 15 7 chrX 112623224 112623359 -54026937 - Lx8 LINE L1 -553 6920 6785 1 1444 273 296 0 125 chrX 112623721 112623833 -54026463 - B3 SINE B2 -17 199 102 1 1444 2273 197 24 76 chrX 112623861 112624399 -54025897 - RLTR28 LTR ERVL -14 510 1 1 1444 276 242 30 10 chrX 112624905 112625005 -54025291 - L1MA5 LINE L1 -4 6296 6195 1 1444 7263 94 10 9 chrX 112625026 112626489 -54023807 - L1_Mus2 LINE L1 -4 6562 5104 1 1444 3367 48 5 0 chrX 112626489 112626905 -54023391 - L1Md_F3 LINE L1 -1 6583 6166 1 1444 6282 127 10 23 chrX 112626905 112627138 -54023158 - L1_Mus2 LINE L1 -780 5103 4872 1 1444 753 286 39 0 chrX 112627624 112627827 -54022469 + B3 SINE B2 1 211 -5 1 1444 558 304 46 56 chrX 112628167 112628557 -54021739 - Lx9 LINE L1 -18 7626 7241 1 1444 220 379 16 16 chrX 112629417 112629543 -54020753 - B3 SINE B2 -11 205 80 1 1444 299 340 60 40 chrX 112630287 112630437 -54019859 + MER76 LTR ERVL 50 202 -489 1 1444 24234 148 20 39 chrX 112630454 112634592 -54015704 - L1_Mus3 LINE L1 -4 6634 2598 1 1444 297 0 0 0 chrX 112634592 112634625 -54015671 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1444 24234 172 13 59 chrX 112634625 112636619 -54013677 - L1_Mus3 LINE L1 -3286 2597 697 1 1444 607 359 35 131 chrX 112636645 112637126 -54013170 + MER76 LTR ERVL 208 642 -49 1 1444 11326 145 16 52 chrX 112637377 112640089 -54010207 + L1VL4 LINE L1 338 2952 -607 1 1444 180 77 0 0 chrX 112640094 112640120 -54010176 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1 1444 409 309 45 50 chrX 112640817 112641059 -54009237 - RLTR19-int LTR ERVK -3386 2751 2511 1 1444 3044 200 9 40 chrX 112641069 112641700 -54008596 + L1_Mur2 LINE L1 477 1088 -5998 1 1444 2116 123 16 8 chrX 112641698 112642067 -54008229 + L1_Mur2 LINE L1 2830 3201 -2676 1 1444 2018 196 64 27 chrX 112642080 112642484 -54007812 - RMER19B LTR ERVK -12 890 472 1 1444 275 143 0 20 chrX 112642499 112642549 -54007747 - Lx4B LINE L1 -900 6158 6110 1 1444 14056 195 30 27 chrX 112642710 112644775 -54005521 - Lx3C LINE L1 -41 6935 4811 1 1444 466 53 0 50 chrX 112644775 112644855 -54005441 + (TCTCTG)n Simple_repeat Simple_repeat 1 76 0 1 1444 14056 189 25 42 chrX 112644855 112644868 -54005428 - Lx3C LINE L1 -1076 4810 4806 1 1444 279 0 0 0 chrX 112644868 112644899 -54005397 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1444 14056 189 25 42 chrX 112644899 112645063 -54005233 - Lx3C LINE L1 -1081 4805 4645 1 1444 255 31 0 0 chrX 112645063 112645095 -54005201 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 1444 14056 189 25 42 chrX 112645095 112647133 -54003163 - Lx3C LINE L1 -1242 4644 2683 1 1444 269 106 125 83 chrX 112647116 112647188 -54003108 - Lx3C LINE L1 -5741 1243 1169 1 1444 10837 102 6 4 chrX 112647280 112648871 -54001425 + L1Md_F2 LINE L1 3992 5586 -297 1 1444 7090 94 1 20 chrX 112648872 112649874 -54000422 + L1Md_F2 LINE L1 5588 6570 -12 1 1444 6876 106 6 3 chrX 112649874 112650875 -53999421 + L1_Mur2 LINE L1 4673 5676 -210 1 1444 4791 133 25 3 chrX 112650875 112651652 -53998644 + Lx3_Mus LINE L1 6212 7005 -4 1 1444 21 57 0 0 chrX 112652042 112652077 -53998219 + AT_rich Low_complexity Low_complexity 1 35 0 1 1444 386 344 8 8 chrX 112652848 112652974 -53997322 - ID_B1 SINE B4 -17 207 82 1 1444 7004 96 50 7 chrX 112653231 112654776 -53995520 + L1_Mus3 LINE L1 5026 6634 -4 2 1444 594 264 8 0 chrX 112654991 112655116 -53995180 + B1F2 SINE Alu 9 134 -15 2 1444 24 0 0 0 chrX 112655646 112655670 -53994626 + AT_rich Low_complexity Low_complexity 1 24 0 2 1444 290 360 51 7 chrX 112655726 112655863 -53994433 + B1F2 SINE Alu 7 149 0 2 1444 2747 186 52 40 chrX 112657538 112657890 -53992406 + RMER6C LTR ERVK 4 354 -336 2 1444 189 94 0 0 chrX 112657890 112657922 -53992374 + (CAGA)n Simple_repeat Simple_repeat 1 32 0 2 1444 2747 186 52 40 chrX 112657922 112658246 -53992050 + RMER6C LTR ERVK 355 688 -2 2 1444 907 272 131 22 chrX 112658653 112659059 -53991237 - RCHARR1 DNA MER1_type -8 966 517 2 1444 271 57 0 0 chrX 112659057 112659092 -53991204 - U2 snRNA snRNA -153 35 1 2 1444 260 265 39 39 chrX 112659163 112659265 -53991031 - RCHARR1 DNA MER1_type -466 508 407 2 1444 824 325 69 52 chrX 112659708 112660127 -53990169 - RCHARR1 DNA MER1_type -543 431 6 2 1444 2290 83 19 27 chrX 112661138 112661334 -53988962 + Lx3_Mus LINE L1 4440 4639 -1247 2 1444 186 43 0 0 chrX 112661334 112661357 -53988939 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1444 2290 83 19 27 chrX 112661357 112661530 -53988766 + Lx3_Mus LINE L1 4640 4806 -1080 2 1444 8712 98 58 9 chrX 112661550 112663177 -53987119 + Lx3_Mus LINE L1 5322 7009 0 2 1444 476 153 47 0 chrX 112663339 112663424 -53986872 - B1_Mus2 SINE Alu -1 146 58 2 1444 2917 20 48 3 chrX 112663424 112663775 -53986521 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1444 34397 24 9 1 chrX 112663777 112669376 -53980920 + IAPEz-int LTR ERVK 3 5554 -927 2 1444 6871 32 2 7 chrX 112669369 112670184 -53980112 + IAPEz-int LTR ERVK 5671 6481 0 2 1444 2907 23 48 3 chrX 112670184 112670535 -53979761 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1444 297 140 0 0 chrX 112670543 112670593 -53979703 - B1_Mus1 SINE Alu -97 51 2 2 1444 620 331 36 8 chrX 112671229 112671482 -53978814 - Lx8 LINE L1 -267 7206 6947 2 1444 387 105 0 0 chrX 112671521 112671578 -53978718 + MT2A LTR ERVL 104 160 -373 2 1444 331 44 0 0 chrX 112671577 112671622 -53978674 + MT2A LTR ERVL 488 532 -1 2 1444 375 270 60 51 chrX 112671624 112671741 -53978555 - Lx8 LINE L1 -515 6958 6841 2 1444 544 311 19 77 chrX 112671842 112672051 -53978245 - B3 SINE B2 0 198 2 2 1444 268 214 77 0 chrX 112672242 112672333 -53977963 + Lx4B LINE L1 876 966 -6120 2 1444 34821 37 18 20 chrX 112672329 112677002 -53973294 + L1Md_A LINE L1 204 4923 -960 2 1444 225 183 46 77 chrX 112677002 112677067 -53973229 - RMER20A LTR ERVK -268 248 186 2 1444 34821 37 18 20 chrX 112677067 112677722 -53972574 + L1Md_A LINE L1 4924 5586 -297 2 1444 8149 45 1 1 chrX 112677723 112678717 -53971579 + L1Md_T LINE L1 5588 6581 -1 2 1444 2237 212 22 17 chrX 112678719 112679564 -53970732 + Lx4B LINE L1 958 1809 -4068 2 1444 5989 12 0 0 chrX 112679564 112680239 -53970057 - L1Md_A LINE L1 0 6582 5908 2 1444 7596 14 0 0 chrX 112680239 112681102 -53969194 + L1_Mm LINE L1 4778 5640 -243 2 1444 8798 184 28 35 chrX 112681098 112681353 -53968943 + Lx4B LINE L1 1800 2049 -3828 2 1444 405 39 0 0 chrX 112681353 112681404 -53968892 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1444 8798 184 28 35 chrX 112681404 112682741 -53967555 + Lx4B LINE L1 2050 3370 -2507 2 1444 5156 119 1 13 chrX 112682741 112683524 -53966772 - L1Md_F2 LINE L1 0 6582 5809 2 1444 8798 184 28 35 chrX 112683524 112683652 -53966644 + Lx4B LINE L1 3371 3485 -2392 2 1444 183 42 0 0 chrX 112683652 112683676 -53966620 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 1444 8798 184 28 35 chrX 112683676 112684015 -53966281 + Lx4B LINE L1 3486 3846 -2031 2 1444 4268 135 71 15 chrX 112684008 112684311 -53965985 - Lx2 LINE L1 -454 6543 6217 2 1444 2885 67 34 0 chrX 112684311 112684698 -53965598 - MTB LTR MaLR 0 400 1 2 1444 4268 135 71 15 chrX 112684698 112685122 -53965174 - Lx2 LINE L1 -781 6216 5775 2 1444 395 58 0 0 chrX 112685120 112685172 -53965124 - Lx2 LINE L1 -1016 5638 5587 2 1444 6661 210 22 10 chrX 112685177 112686882 -53963414 + Lx4B LINE L1 5319 7054 -4 2 1444 27 49 0 0 chrX 112686911 112686952 -53963344 + AT_rich Low_complexity Low_complexity 1 41 0 2 1444 2016 213 28 47 chrX 112687056 112687593 -53962703 - RLTR24 LTR ERV1 -2 527 1 2 1444 22 0 0 0 chrX 112687594 112687616 -53962680 + AT_rich Low_complexity Low_complexity 1 22 0 2 1444 408 158 0 0 chrX 112688061 112688156 -53962140 + GA-rich Low_complexity Low_complexity 2 96 0 2 1444 22 0 0 0 chrX 112688377 112688399 -53961897 + AT_rich Low_complexity Low_complexity 1 22 0 2 1444 40067 17 1 10 chrX 112688526 112694760 -53955536 - L1Md_A LINE L1 -1 6581 406 2 1444 342 0 0 0 chrX 112694889 112694927 -53955369 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1444 200 97 32 0 chrX 112695255 112695286 -53955010 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 2 1444 411 21 0 0 chrX 112695364 112695412 -53954884 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1444 312 238 60 96 chrX 112695995 112696162 -53954134 - RMER10A LTR ERVL -25 417 257 2 1444 4722 119 7 40 chrX 112696325 112697098 -53953198 - Lx2 LINE L1 -3 6994 6248 2 1444 33 25 0 0 chrX 112697164 112697204 -53953092 + AT_rich Low_complexity Low_complexity 1 40 0 2 1444 241 256 0 0 chrX 112697337 112697380 -53952916 + Lx8 LINE L1 7133 7175 -298 2 1444 2423 135 104 8 chrX 112697394 112698020 -53952276 + Lx3_Mus LINE L1 6291 6976 -5 2 1444 1001 127 0 0 chrX 112698221 112698363 -53951933 + B1_Mus1 SINE Alu 1 142 -6 2 1444 297 0 0 0 chrX 112698365 112698398 -53951898 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 2 1444 432 0 0 0 chrX 112698457 112698505 -53951791 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 1444 1097 55 14 0 chrX 112698576 112698721 -53951575 + B1_Mm SINE Alu 1 147 0 2 1444 282 56 0 0 chrX 112698721 112698757 -53951539 + (CAAAAA)n Simple_repeat Simple_repeat 6 41 0 2 1444 414 127 0 0 chrX 112699191 112699262 -53951034 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 1444 637 209 84 18 chrX 112700008 112700174 -53950122 - B2_Mm2 SINE B2 -16 179 3 2 1444 272 299 0 13 chrX 112700309 112700387 -53949909 - B3 SINE B2 -70 146 70 2 1444 879 238 18 32 chrX 112700996 112701217 -53949079 - MT2B LTR ERVL 0 601 384 2 1444 1573 219 25 8 chrX 112701310 112701710 -53948586 + L1_Mur3 LINE L1 3879 4285 -1595 2 1444 246 194 0 0 chrX 112702428 112702490 -53947806 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 1444 817 122 7 7 chrX 112702519 112702667 -53947629 + (TA)n Simple_repeat Simple_repeat 1 148 0 2 1444 22 56 0 0 chrX 112702854 112702890 -53947406 + AT_rich Low_complexity Low_complexity 1 36 0 2 1444 228 35 0 0 chrX 112703463 112703492 -53946804 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1444 340 340 38 0 chrX 112704635 112704741 -53945555 + B4A SINE B4 1 110 -182 2 1444 2094 123 3 59 chrX 112705861 112706199 -53944097 - ORR1A2 LTR MaLR -8 319 1 2 1444 318 89 0 0 chrX 112707638 112707683 -53942613 - U2 snRNA snRNA -143 45 1 2 1444 206 0 0 65 chrX 112707897 112707928 -53942368 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 2 1444 22 88 0 0 chrX 112708682 112708739 -53941557 + AT_rich Low_complexity Low_complexity 1 57 0 2 1444 3801 101 34 29 chrX 112709576 112709595 -53940701 - L1_Mus2 LINE L1 0 6566 6546 2 1444 245 29 0 29 chrX 112709595 112709630 -53940666 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2 1444 3801 101 34 29 chrX 112709630 112710199 -53940097 - L1_Mus2 LINE L1 -21 6545 5975 2 1444 3778 121 3 2 chrX 112710200 112710779 -53939517 + L1_Mm LINE L1 4822 5401 -482 2 1444 7806 15 0 6 chrX 112710969 112711867 -53938429 + L1Md_A LINE L1 5689 6581 -1 2 1444 3393 84 77 10 chrX 112712026 112712521 -53937775 - L1_Mus2 LINE L1 0 6566 6039 2 1444 402 111 0 0 chrX 112712539 112712602 -53937694 - L1VL4 LINE L1 -2352 1207 1145 2 1444 243 0 0 0 chrX 112712646 112712673 -53937623 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1444 980 124 0 0 chrX 112712673 112712810 -53937486 - B1_Mm SINE Alu -10 137 1 2 1444 306 0 0 0 chrX 112712823 112712857 -53937439 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2 1444 7885 45 9 3 chrX 112712859 112713824 -53936472 - L1Md_F2 LINE L1 -24 6558 5588 2 1444 2168 39 0 0 chrX 112713832 112714086 -53936210 + L1Md_F2 LINE L1 5343 5596 -287 2 1444 3968 110 2 5 chrX 112714082 112714861 -53935435 - L1VL4 LINE L1 -2402 1157 381 2 1444 5388 154 9 2 chrX 112714860 112715738 -53934558 + Lx2 LINE L1 5760 6643 -354 2 1444 1168 165 14 0 chrX 112715738 112715956 -53934340 + Lx2 LINE L1 6775 6995 -2 2 1444 743 247 39 60 chrX 112717071 112717304 -53932992 + RMER1C Other Other 792 1019 -323 2 1444 233 226 0 0 chrX 112717780 112717833 -53932463 + B3 SINE B2 155 207 -9 2 1444 243 0 0 0 chrX 112718193 112718220 -53932076 + (TTA)n Simple_repeat Simple_repeat 1 27 0 2 1444 411 305 73 37 chrX 112718392 112718610 -53931686 - Lx7 LINE L1 -333 7363 7138 2 1444 667 309 45 6 chrX 112718814 112718990 -53931306 - B3 SINE B2 -7 209 27 2 1444 21 0 0 0 chrX 112719183 112719204 -53931092 + AT_rich Low_complexity Low_complexity 1 21 0 2 1444 7709 126 70 17 chrX 112719226 112720719 -53929577 + Lx2 LINE L1 5423 6995 -2 2 1444 216 86 0 0 chrX 112720719 112720754 -53929542 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1445 26 0 0 0 chrX 112721997 112722023 -53928273 + AT_rich Low_complexity Low_complexity 1 26 0 2 1445 180 0 0 0 chrX 112722369 112722389 -53927907 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2 1445 331 0 0 20 chrX 112723017 112723068 -53927228 - L1_Mus4 LINE L1 -7 6629 6580 2 1445 543 46 23 11 chrX 112723077 112723165 -53927131 + (TA)n Simple_repeat Simple_repeat 1 89 0 2 1445 218 265 55 90 chrX 112723173 112723318 -53926978 - L2c LINE L2 -36 3351 3212 2 1445 2660 309 70 80 chrX 112723470 112724150 -53926146 + Tigger1 DNA MER2_type 1000 1705 -713 2 1445 2764 94 2 17 chrX 112724150 112724552 -53925744 + MTA_Mm LTR MaLR 1 396 0 2 1445 2660 309 70 80 chrX 112724552 112725294 -53925002 + Tigger1 DNA MER2_type 1706 2407 -11 2 1445 1155 76 0 0 chrX 112725385 112725530 -53924766 + B1_Mus1 SINE Alu 1 145 -3 2 1445 303 93 0 0 chrX 112725532 112725575 -53924721 + (A)n Simple_repeat Simple_repeat 1 43 0 2 1445 1059 128 0 75 chrX 112725776 112725988 -53924308 - L1Md_F3 LINE L1 0 6584 6389 2 1445 4249 110 107 12 chrX 112725988 112726659 -53923637 - L1_Mus3 LINE L1 -26 6612 5878 2 1445 1607 76 31 0 chrX 112726678 112726901 -53923395 + L1_Mus3 LINE L1 5588 5817 -821 2 1445 288 294 10 19 chrX 112727028 112727132 -53923164 + GA-rich Low_complexity Low_complexity 2 104 0 2 1445 648 316 5 28 chrX 112727293 112727505 -53922791 - Lx6 LINE L1 -45 7415 7209 2 1445 1777 142 0 0 chrX 112727533 112727814 -53922482 - Lx LINE L1 -386 5497 5217 2 1445 6226 155 7 30 chrX 112727807 112728983 -53921313 + Lx LINE L1 5500 6651 -3 2 1445 871 221 11 5 chrX 112729122 112729309 -53920987 - Lx7 LINE L1 -699 6997 6810 2 1445 22 0 0 0 chrX 112729346 112729368 -53920928 + AT_rich Low_complexity Low_complexity 1 22 0 2 1445 3265 154 10 30 chrX 112729369 112729944 -53920352 - Lx3B LINE L1 -3 6970 6407 2 1445 325 336 20 27 chrX 112730556 112730706 -53919590 - B1F2 SINE Alu 0 149 1 2 1445 426 350 65 11 chrX 112730997 112731182 -53919114 - MER47B DNA MER2_type -176 242 48 2 1445 598 255 88 14 chrX 112731234 112731381 -53918915 - B3 SINE B2 -25 191 34 2 1445 2158 199 3 3 chrX 112731444 112731836 -53918460 - ORR1B1 LTR MaLR -2 392 1 2 1445 344 350 76 35 chrX 112732137 112732451 -53917845 + L1MB8 LINE L1 5848 6174 -4 3 1445 480 97 32 0 chrX 112732814 112732907 -53917389 + (TA)n Simple_repeat Simple_repeat 2 97 0 3 1445 26 30 0 0 chrX 112733071 112733104 -53917192 + AT_rich Low_complexity Low_complexity 1 33 0 3 1445 24 0 0 0 chrX 112733210 112733234 -53917062 + AT_rich Low_complexity Low_complexity 1 24 0 3 1445 456 303 67 22 chrX 112734681 112734904 -53915392 - MER44A DNA MER2_type 0 339 107 3 1445 1586 256 96 15 chrX 112734924 112735392 -53914904 + Lx5 LINE L1 6537 7042 -8 3 1445 4412 252 93 37 chrX 112735540 112736818 -53913478 + Lx6 LINE L1 6110 7459 -1 3 1445 381 341 43 61 chrX 112736856 112737134 -53913162 + L1MC4 LINE L1 1327 1599 -4616 3 1445 699 230 92 30 chrX 112737277 112737584 -53912712 + RMER17C LTR ERVK 58 410 0 3 1445 885 244 159 44 chrX 112737654 112738044 -53912252 + Lx9 LINE L1 6028 6462 -1182 3 1445 1400 284 120 8 chrX 112738040 112738630 -53911666 + Lx9 LINE L1 6970 7625 -19 3 1445 22 0 0 0 chrX 112738711 112738733 -53911563 + AT_rich Low_complexity Low_complexity 1 22 0 3 1445 4087 168 16 22 chrX 112739151 112739920 -53910376 + Lx4A LINE L1 6293 7056 -2 3 1445 21 57 0 0 chrX 112739946 112739981 -53910315 + AT_rich Low_complexity Low_complexity 1 35 0 3 1445 303 380 25 5 chrX 112739981 112740177 -53910119 - B3 SINE B2 -13 203 4 3 1445 516 176 0 0 chrX 112740280 112740382 -53909914 + (TA)n Simple_repeat Simple_repeat 2 103 0 3 1445 1429 233 142 5 chrX 112740434 112740803 -53909493 + MTD LTR MaLR 2 405 -14 3 1445 894 286 68 18 chrX 112740956 112741354 -53908942 - L1MEc LINE L1 -5405 995 578 3 1445 249 266 45 27 chrX 112741568 112741680 -53908616 - L1MA6 LINE L1 -124 6176 6063 3 1445 1691 220 44 37 chrX 112741687 112742122 -53908174 + RMER10A LTR ERVL 3 440 -2 3 1445 601 157 15 23 chrX 112742219 112742349 -53907947 - Lx2 LINE L1 0 6997 6869 3 1445 234 213 0 16 chrX 112742497 112742559 -53907737 + (TTTA)n Simple_repeat Simple_repeat 2 62 0 3 1445 262 240 16 66 chrX 112742654 112742837 -53907459 + A-rich Low_complexity Low_complexity 2 175 0 3 1445 11878 95 265 19 chrX 112742906 112746133 -53904163 - L1Md_F LINE L1 -1359 4524 389 3 1445 228 122 0 0 chrX 112746145 112746186 -53904110 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 3 1445 3312 170 18 69 chrX 112746512 112747189 -53903107 - RLTR26 LTR ERVK 0 642 1 3 1445 207 0 0 0 chrX 112747343 112747366 -53902930 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 1445 815 216 130 143 chrX 112747421 112747670 -53902626 - ORR1D1 LTR MaLR 0 374 163 3 1445 729 0 0 0 chrX 112747670 112747751 -53902545 + (GAA)n Simple_repeat Simple_repeat 3 83 0 3 1445 815 216 130 143 chrX 112747751 112747879 -53902417 - ORR1D1 LTR MaLR -212 162 3 3 1445 26 30 0 0 chrX 112747901 112747934 -53902362 + AT_rich Low_complexity Low_complexity 1 33 0 3 1445 751 275 65 0 chrX 112747965 112748165 -53902131 - MTD LTR MaLR 0 419 207 3 1445 964 264 73 56 chrX 112748165 112748575 -53901721 - MTD LTR MaLR 0 419 3 3 1445 1980 194 60 0 chrX 112749307 112749704 -53900592 - Lx2 LINE L1 -1 6996 6576 3 1445 1252 169 0 0 chrX 112749702 112749903 -53900393 + Lx2 LINE L1 6331 6531 -466 3 1445 366 296 8 60 chrX 112749912 112750045 -53900251 - Lx9 LINE L1 -1679 5965 5840 3 1445 396 0 0 0 chrX 112750107 112750151 -53900145 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 1445 279 0 0 0 chrX 112750151 112750181 -53900115 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1445 1322 300 84 2 chrX 112750350 112750910 -53899386 + Lx9 LINE L1 6357 6962 -682 3 1445 1025 285 113 8 chrX 112750973 112751335 -53898961 - MTD LTR MaLR -14 393 4 3 1445 228 292 56 0 chrX 112751350 112751422 -53898874 + Lx8 LINE L1 6845 6920 -553 3 1445 21 71 0 0 chrX 112751485 112751527 -53898769 + AT_rich Low_complexity Low_complexity 1 42 0 3 1445 331 365 5 21 chrX 112751857 112752050 -53898246 + Lx9 LINE L1 7074 7263 -381 3 1445 252 332 118 22 chrX 112752089 112752317 -53897979 + Lx9 LINE L1 7242 7491 -153 3 1445 4317 155 17 30 chrX 112752430 112753250 -53897046 + RMER17D2 LTR ERVK 1 809 0 3 1445 670 306 91 34 chrX 112753251 112753603 -53896693 + Lx8 LINE L1 7073 7444 -29 3 1445 2121 294 25 29 chrX 112753618 112754248 -53896048 - Lx5 LINE L1 -6 7454 6827 3 1445 7076 199 38 124 chrX 112754840 112757981 -53892315 - Lx5 LINE L1 -325 6725 3854 3 1445 180 0 0 0 chrX 112757981 112758001 -53892295 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 1445 7076 192 43 164 chrX 112758001 112758036 -53892260 - Lx5 LINE L1 -2024 3853 3816 3 1445 228 342 82 0 chrX 112758036 112758109 -53892187 - B3 SINE B2 -136 80 2 3 1445 283 385 25 30 chrX 112758495 112758696 -53891600 - LTR16A1 LTR ERVL 0 456 257 3 1445 2012 319 73 65 chrX 112759447 112760753 -53889543 - Lx8 LINE L1 -368 7105 5789 3 1445 325 228 13 0 chrX 112760750 112760829 -53889467 + L1_Rod LINE L1 5630 5709 -138 3 1445 236 281 0 144 chrX 112760921 112761025 -53889271 - B1_Mm SINE Alu -50 97 9 3 1445 194 0 0 37 chrX 112761133 112761160 -53889136 + (CATTC)n Simple_repeat Simple_repeat 2 27 0 3 1445 26 0 0 0 chrX 112761386 112761412 -53888884 + AT_rich Low_complexity Low_complexity 1 26 0 3 1445 2944 161 59 29 chrX 112761465 112762022 -53888274 - Lx3B LINE L1 -1 6972 6399 3 1445 22 0 0 0 chrX 112762482 112762504 -53887792 + AT_rich Low_complexity Low_complexity 1 22 0 3 1445 21 36 0 0 chrX 112762631 112762659 -53887637 + AT_rich Low_complexity Low_complexity 1 28 0 3 1445 1673 189 0 13 chrX 112762956 112763267 -53887029 - RLTR10E LTR ERVK 0 311 5 3 1445 2680 175 1 7 chrX 112763302 112764032 -53886264 + L1_Mus2 LINE L1 700 1431 -2483 3 1445 26116 102 13 3 chrX 112764019 112768588 -53881708 + L1_Mus2 LINE L1 1969 6654 0 3 1445 2707 228 57 12 chrX 112768969 112769654 -53880642 - Lx2B LINE L1 -2 6974 6236 3 1445 2830 101 20 54 chrX 112769672 112770132 -53880164 + L1_Mus3 LINE L1 5857 6300 -338 3 1445 6639 138 7 6 chrX 112770468 112771553 -53878743 - Lx3_Mus LINE L1 -13 6996 5910 3 1445 355 106 30 0 chrX 112771559 112771625 -53878671 + (CAA)n Simple_repeat Simple_repeat 1 68 0 3 1445 7129 163 35 22 chrX 112772000 112772178 -53878118 + L1_Mur2 LINE L1 3320 3478 -2399 3 1445 432 0 0 0 chrX 112772178 112772226 -53878070 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 3 1445 7129 163 35 22 chrX 112772226 112773436 -53876860 + L1_Mur2 LINE L1 3479 4726 -1151 3 1445 1843 30 8 0 chrX 112773436 112773670 -53876626 - MTA_Mm-int LTR MaLR -862 236 1 3 1445 3394 33 2 0 chrX 112773670 112774065 -53876231 - MTA_Mm LTR MaLR 0 396 1 3 1445 433 119 0 0 chrX 112774065 112774132 -53876164 + L1_Mur2 LINE L1 5196 5262 -615 3 1445 27606 40 1 2 chrX 112774131 112779539 -53870757 + L1Md_T LINE L1 100 5589 -297 3 1445 8358 35 1 0 chrX 112779539 112780534 -53869762 + L1Md_T LINE L1 5590 6585 0 3 1445 2607 177 10 2 chrX 112780537 112781009 -53869287 + L1_Mm LINE L1 5252 5760 -429 3 1445 2721 126 19 2 chrX 112781009 112781440 -53868856 + Lx LINE L1 6217 6654 0 3 1445 1106 297 32 32 chrX 112781440 112781489 -53868807 + L1_Mm LINE L1 5761 5803 -386 3 1445 229 311 55 6 chrX 112781480 112781645 -53868651 + L1MC3 LINE L1 6865 7037 -748 3 1445 239 312 44 18 chrX 112781885 112781999 -53868297 + L1MC3 LINE L1 7340 7456 -329 3 1445 264 337 23 0 chrX 112782018 112782104 -53868192 + PB1D10 SINE Alu 19 106 -11 3 1445 2572 294 42 36 chrX 112782121 112782187 -53868109 + Lx8 LINE L1 6211 6279 -1194 3 1445 330 26 0 0 chrX 112782187 112782226 -53868070 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1445 2572 294 42 36 chrX 112782226 112783086 -53867210 + Lx8 LINE L1 6280 7142 -331 3 1445 657 213 43 85 chrX 112783101 112783265 -53867031 + ORR1B2 LTR MaLR 20 176 -191 3 1445 315 0 0 0 chrX 112783282 112783317 -53866979 + (TC)n Simple_repeat Simple_repeat 1 35 0 3 1445 342 61 0 0 chrX 112783317 112783366 -53866930 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1445 2287 125 15 18 chrX 112784478 112784870 -53865426 - Lx3A LINE L1 -643 6338 5948 3 1445 2844 231 22 5 chrX 112784895 112785623 -53864673 - Lx6 LINE L1 -1201 6259 5516 3 1445 1068 129 0 0 chrX 112785621 112785791 -53864505 - L1_Mus4 LINE L1 -566 6070 5901 3 1445 22 35 0 0 chrX 112785839 112785868 -53864428 + AT_rich Low_complexity Low_complexity 1 29 0 3 1445 29944 151 61 9 chrX 112786739 112787864 -53862432 + L1Md_F2 LINE L1 214 1401 -4482 3 1445 5054 22 5 0 chrX 112787864 112788453 -53861843 + L1Md_T LINE L1 5989 6580 -2 3 1445 29944 90 7 22 chrX 112788453 112792710 -53857586 + L1Md_F2 LINE L1 1402 5585 -298 3 1445 6418 93 50 25 chrX 112792710 112793667 -53856629 + L1Md_F2 LINE L1 5587 6567 -15 3 1445 198 0 0 0 chrX 112793793 112793815 -53856481 + (CAA)n Simple_repeat Simple_repeat 3 24 0 3 1445 237 83 0 0 chrX 112793821 112793857 -53856439 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 3 1445 412 252 48 47 chrX 112794773 112794926 -53855370 + MTD LTR MaLR 225 419 0 3 1445 724 336 47 0 chrX 112795145 112795359 -53854937 + MER58A DNA MER1_type 1 224 0 3 1445 480 35 0 0 chrX 112795649 112795707 -53854589 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 1445 368 20 20 0 chrX 112796500 112796549 -53853747 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1445 4747 179 64 42 chrX 112798466 112799444 -53850852 + Lx4A LINE L1 6056 7055 -3 3 1445 183 80 0 0 chrX 112799547 112799572 -53850724 + (TATG)n Simple_repeat Simple_repeat 1 25 0 3 1445 335 351 88 0 chrX 112799599 112799713 -53850583 - B3A SINE B2 -73 125 2 3 1445 261 258 0 16 chrX 112800755 112800818 -53849478 + B3 SINE B2 1 62 -154 3 1445 566 295 40 51 chrX 112800921 112801096 -53849200 + B3 SINE B2 44 216 0 3 1445 231 188 0 0 chrX 112801160 112801208 -53849088 + (TAG)n Simple_repeat Simple_repeat 1 48 0 3 1445 1015 264 83 14 chrX 112801284 112801634 -53848662 + ORR1D1 LTR MaLR 1 374 0 3 1445 342 0 0 0 chrX 112801785 112801823 -53848473 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1445 351 0 0 0 chrX 112801824 112801863 -53848433 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 1445 3086 157 183 17 chrX 112801868 112802681 -53847615 + RMER17B LTR ERVK 1 948 -10 3 1445 212 0 36 0 chrX 112802836 112802864 -53847432 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1445 7807 41 4 1 chrX 112803192 112804144 -53846152 + L1Md_F2 LINE L1 5615 6569 -13 3 1445 364 273 52 0 chrX 112804593 112804747 -53845549 - L1MA4 LINE L1 -393 5907 5746 3 1445 44 20 0 0 chrX 112804761 112804812 -53845484 + AT_rich Low_complexity Low_complexity 1 51 0 3 1445 2172 294 66 10 chrX 112804818 112805528 -53844768 - Lx5 LINE L1 -9 7041 6292 3 1445 2941 212 13 87 chrX 112805528 112805608 -53844688 - RLTR26 LTR ERVK 0 642 563 3 1445 869 59 0 0 chrX 112805608 112805726 -53844570 + L1_Mus1 LINE L1 6449 6566 -1 3 1445 2941 212 13 87 chrX 112805726 112806338 -53843958 - RLTR26 LTR ERVK -80 562 1 3 1445 648 269 7 7 chrX 112806341 112806491 -53843805 - Lx5 LINE L1 -756 6294 6145 3 1445 333 0 0 0 chrX 112807089 112807126 -53843170 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1445 1755 189 3 3 chrX 112807707 112808026 -53842270 - Lx5 LINE L1 -136 5741 5423 3 1445 13600 200 38 26 chrX 112808049 112810997 -53839299 - Lx5 LINE L1 -849 5028 2055 3 1445 369 0 0 0 chrX 112810997 112811038 -53839258 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1445 13600 200 38 26 chrX 112811038 112811407 -53838889 - Lx5 LINE L1 -3823 2054 1672 3 1445 369 316 49 51 chrX 112811428 112811789 -53838507 - RLTR15 LTR ERVK -33 326 50 4 1445 23 0 0 0 chrX 112811847 112811870 -53838426 + AT_rich Low_complexity Low_complexity 1 23 0 4 1445 2130 209 31 2 chrX 112811925 112812667 -53837629 - Lx5 LINE L1 -4215 1662 903 3 1445 3544 159 34 10 chrX 112813216 112813840 -53836456 - RLTR26 LTR ERVK 0 642 4 4 1445 22726 106 19 3 chrX 112813846 112814444 -53835852 - MERVK26-int LTR ERVK -1 6918 6319 4 1445 270 0 0 0 chrX 112814444 112814474 -53835822 + (TC)n Simple_repeat Simple_repeat 1 30 0 4 1445 22726 106 19 3 chrX 112814474 112817099 -53833197 - MERVK26-int LTR ERVK -601 6318 3647 4 1445 495 87 0 0 chrX 112817451 112817520 -53832776 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 1445 252 0 0 0 chrX 112817520 112817547 -53832749 + (GA)n Simple_repeat Simple_repeat 2 29 0 4 1445 266 218 0 0 chrX 112817611 112817666 -53832630 + GA-rich Low_complexity Low_complexity 2 56 0 4 1445 601 280 8 0 chrX 112817988 112818113 -53832183 - B3 SINE B2 -90 126 1 4 1445 415 330 108 20 chrX 112818433 112818969 -53831327 + Kanga2_a DNA Tc2 276 858 -30 4 1445 268 280 5 0 chrX 112819434 112819507 -53830789 - ORR1E LTR MaLR -294 76 2 4 1445 436 314 34 0 chrX 112819564 112819682 -53830614 - ID_B1 SINE B4 -7 217 96 4 1445 744 94 3 0 chrX 112819863 112819974 -53830322 - L1_Mus4 LINE L1 -1781 5915 5805 4 1445 3638 50 0 0 chrX 112820034 112820477 -53829819 - L1_Mus1 LINE L1 -284 6283 5841 4 1445 2120 63 81 0 chrX 112820477 112820761 -53829535 + L1_Mus1 LINE L1 6261 6567 0 4 1445 289 384 23 83 chrX 112820817 112821033 -53829263 - MLT1A0 LTR MaLR -95 270 68 4 1445 3157 150 104 30 chrX 112821105 112821804 -53828492 + RMER17A LTR ERVK 1 751 0 4 1445 6929 133 18 17 chrX 112821886 112823087 -53827209 - Lx3_Mus LINE L1 -9 7000 5799 4 1445 3456 133 5 57 chrX 112823087 112823387 -53826909 + L1_Mur1 LINE L1 5276 5567 -319 4 1445 5121 71 3 3 chrX 112823387 112824066 -53826230 + L1Md_F2 LINE L1 5885 6563 -19 4 1445 3456 133 5 57 chrX 112824066 112824355 -53825941 + L1_Mur1 LINE L1 5568 5835 -51 4 1445 21 36 0 0 chrX 112824362 112824390 -53825906 + AT_rich Low_complexity Low_complexity 1 28 0 4 1445 412 280 105 50 chrX 112824444 112824806 -53825490 - L1MB3 LINE L1 -106 6065 5688 4 1445 862 131 13 7 chrX 112824818 112824972 -53825324 + GA-rich Low_complexity Low_complexity 2 156 0 4 1445 1950 217 26 28 chrX 112825049 112825476 -53824820 + ORR1D2-int LTR MaLR 945 1370 0 4 1445 1015 302 43 56 chrX 112825476 112825537 -53824759 + ORR1D2 LTR MaLR 1 60 -310 4 1445 669 163 0 66 chrX 112825537 112825688 -53824608 - L1Md_F3 LINE L1 -1 6583 6443 4 1445 1015 302 43 56 chrX 112825688 112826001 -53824295 + ORR1D2 LTR MaLR 61 370 0 4 1445 26 30 0 0 chrX 112826174 112826207 -53824089 + AT_rich Low_complexity Low_complexity 1 33 0 4 1445 767 273 104 22 chrX 112826207 112826477 -53823819 - MTD LTR MaLR -3 416 125 4 1445 21 0 0 0 chrX 112826762 112826783 -53823513 + AT_rich Low_complexity Low_complexity 1 21 0 4 1445 1011 90 14 20 chrX 112827155 112827303 -53822993 - B1_Mus1 SINE Alu 0 148 2 4 1445 5975 140 34 52 chrX 112828567 112829092 -53821204 + L1_Mus3 LINE L1 4770 5256 -627 4 1445 3527 96 10 16 chrX 112829092 112829609 -53820687 + L1Md_F2 LINE L1 6069 6582 0 4 1445 7079 111 15 14 chrX 112829609 112830965 -53819331 + L1_Mus3 LINE L1 5257 6636 -2 4 1445 6045 72 4 4 chrX 112831014 112831835 -53818461 + RLTR22_Mus LTR ERVK 1 821 -987 4 1445 1323 171 30 0 chrX 112832089 112832323 -53817973 + RLTR22_Mur LTR ERVK 1591 1831 -17 4 1445 22 0 0 0 chrX 112832451 112832473 -53817823 + AT_rich Low_complexity Low_complexity 1 22 0 4 1445 892 283 126 45 chrX 112832474 112832811 -53817485 - ORR1D2 LTR MaLR -43 327 8 4 1445 268 227 0 18 chrX 112832852 112832925 -53817371 - B1F SINE Alu -2 147 47 4 1445 216 0 0 0 chrX 112833097 112833121 -53817175 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1445 275 297 113 35 chrX 112833295 112833410 -53816886 - ORR1D1 LTR MaLR -125 249 126 4 1445 2581 32 0 6 chrX 112833503 112833819 -53816477 + L1Md_F3 LINE L1 6271 6584 0 4 1445 3206 102 33 0 chrX 112833829 112834289 -53816007 - L1_Mus2 LINE L1 0 6566 6092 4 1445 701 350 15 18 chrX 112835336 112835610 -53814686 - Lx7 LINE L1 -541 7155 6883 4 1445 302 362 28 0 chrX 112835619 112835760 -53814536 + Lx7 LINE L1 7155 7299 -397 4 1445 506 301 35 63 chrX 112835965 112836249 -53814047 + Lx9 LINE L1 6761 7036 -608 4 1445 7076 170 27 31 chrX 112836590 112838999 -53811297 + Lx4A LINE L1 4622 7058 0 4 1445 3841 126 3 12 chrX 112839205 112839809 -53810487 - Lx3A LINE L1 -5 6976 6378 4 1445 5348 95 1 7 chrX 112839811 112840561 -53809735 - L1_Mur1 LINE L1 -9 5877 5132 4 1445 324 94 0 0 chrX 112841924 112841977 -53808319 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1445 217 183 0 32 chrX 112842396 112842458 -53807838 + CT-rich Low_complexity Low_complexity 1 60 0 4 1445 267 267 200 32 chrX 112842536 112842691 -53807605 - RMER15 LTR ERVL -55 520 340 4 1445 627 14 0 0 chrX 112842734 112842806 -53807490 + (TA)n Simple_repeat Simple_repeat 2 73 0 4 1445 2561 220 42 104 chrX 112842865 112843626 -53806670 - RMER6D LTR ERVK -4 716 3 4 1445 1370 99 5 0 chrX 112843768 112843969 -53806327 - L1_Mus2 LINE L1 -1 6565 6364 4 1445 8273 137 4 2 chrX 112843971 112845320 -53804976 - L1_Mm LINE L1 -796 5087 3737 4 1445 690 304 22 28 chrX 112845426 112845744 -53804552 - L1VL2 LINE L1 -5933 402 87 4 1445 22 0 0 0 chrX 112845795 112845817 -53804479 + AT_rich Low_complexity Low_complexity 1 22 0 4 1445 402 326 42 37 chrX 112846103 112846697 -53803599 + L1MB4 LINE L1 5356 5968 -215 4 1445 30251 70 16 2 chrX 112846703 112847633 -53802663 + L1Md_F2 LINE L1 307 1249 -4634 4 1445 279 0 0 0 chrX 112847633 112847664 -53802632 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1445 30251 95 4 5 chrX 112847664 112852002 -53798294 + L1Md_F2 LINE L1 1250 5585 -298 4 180 7964 52 1 5 chrX 112852003 112853002 -53797294 + L1Md_F2 LINE L1 5587 6581 -1 4 1446 4000 189 83 7 chrX 112853185 112854056 -53796240 + L1_Mus1 LINE L1 345 1280 -5358 4 1446 27720 121 7 5 chrX 112854051 112859212 -53791084 + L1_Mus1 LINE L1 1399 6567 0 4 1446 26 50 0 0 chrX 112859275 112859315 -53790981 + AT_rich Low_complexity Low_complexity 1 40 0 4 1446 2716 289 91 30 chrX 112859629 112859648 -53790648 - Lx9 LINE L1 -194 7450 7432 4 1446 402 21 0 0 chrX 112859648 112859695 -53790601 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 1446 2716 289 91 30 chrX 112859695 112860142 -53790154 - Lx9 LINE L1 -213 7431 6938 4 1446 531 45 0 0 chrX 112860142 112860208 -53790088 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 1446 3063 281 72 36 chrX 112860208 112862185 -53788111 - Lx9 LINE L1 -707 6937 4696 4 1446 39501 25 0 6 chrX 112862211 112867970 -53782326 - L1Md_T LINE L1 -2 6580 865 4 1446 1766 90 24 70 chrX 112867971 112868258 -53782038 - L1_Mus2 LINE L1 -23 6543 6270 4 1446 827 66 0 9 chrX 112868251 112868358 -53781938 + L1_Mus2 LINE L1 6174 6279 -287 4 1446 222 37 0 0 chrX 112868436 112868463 -53781833 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1446 406 263 77 60 chrX 112868463 112868762 -53781534 - Lx9 LINE L1 -1248 4599 4296 4 1446 5018 216 28 91 chrX 112869286 112870976 -53779320 + Lx5 LINE L1 5488 7050 0 4 1446 25 31 0 0 chrX 112871430 112871462 -53778834 + AT_rich Low_complexity Low_complexity 1 32 0 4 1446 710 269 109 0 chrX 112871587 112871788 -53778508 + URR1A DNA MER1_type 1 223 -3 4 1446 483 196 0 0 chrX 112871831 112871969 -53778327 + GA-rich Low_complexity Low_complexity 1 138 0 4 1446 651 26 0 0 chrX 112872115 112872192 -53778104 + (TA)n Simple_repeat Simple_repeat 2 78 0 4 1446 1445 228 28 20 chrX 112872310 112872708 -53777588 + L1_Rod LINE L1 2246 2646 -3201 4 1446 1440 249 79 25 chrX 112872814 112873246 -53777050 - RMER1C Other Other 0 1342 888 4 1446 578 130 0 9 chrX 112873246 112873355 -53776941 + (TTCC)n Simple_repeat Simple_repeat 3 110 0 4 1446 1919 157 21 105 chrX 112873367 112873710 -53776586 - Lx2 LINE L1 0 6997 6689 4 1446 1045 37 73 0 chrX 112873710 112873846 -53776450 - B1_Mm SINE Alu -1 146 1 4 1446 1919 157 21 105 chrX 112873846 112873921 -53776375 - Lx2 LINE L1 -309 6688 6614 4 1446 5679 152 41 11 chrX 112873920 112875553 -53774743 - L1VL4 LINE L1 -1681 1878 197 4 1446 346 300 145 35 chrX 112875547 112875831 -53774465 + L1MD LINE L1 3628 3942 -2204 4 1446 1006 323 118 18 chrX 112876071 112876736 -53773560 + Lx8 LINE L1 6743 7473 0 4 1446 21 0 0 0 chrX 112876739 112876760 -53773536 + AT_rich Low_complexity Low_complexity 1 21 0 4 1446 818 345 42 53 chrX 112876816 112877606 -53772690 + L1M2 LINE L1 3628 4408 -1735 4 1446 630 272 102 29 chrX 112877609 112878118 -53772178 + Lx9 LINE L1 6996 7643 -1 4 1446 267 306 37 15 chrX 112878223 112878359 -53771937 + L1M2 LINE L1 4514 4652 -1491 4 1446 307 297 116 6 chrX 112878441 112878675 -53771621 + L1M2 LINE L1 4744 5054 -1089 4 1446 245 231 115 0 chrX 112878769 112878847 -53771449 - MTEa-int LTR MaLR -1477 103 17 4 1446 424 230 11 0 chrX 112878861 112878946 -53771350 - MTEa LTR MaLR 0 379 294 4 1446 1179 186 52 59 chrX 112878946 112879087 -53771209 - RMER6C LTR ERVK 0 690 558 4 1446 3573 115 4 2 chrX 112879087 112879617 -53770679 - L1_Mus2 LINE L1 -1 6565 6035 4 1446 1179 186 52 59 chrX 112879617 112879761 -53770535 - RMER6C LTR ERVK -133 557 407 4 1446 440 151 509 9 chrX 112879773 112879889 -53770407 - RMER6C LTR ERVK -575 181 8 4 1446 2913 159 37 0 chrX 112879889 112880430 -53769866 - L1_Mm LINE L1 -319 5564 5004 4 1446 278 167 17 0 chrX 112880512 112880572 -53769724 + CT-rich Low_complexity Low_complexity 2 62 0 4 1446 692 298 86 41 chrX 112880875 112881190 -53769106 + MLT2C1 LTR ERVL 3 331 -66 4 1446 186 43 0 0 chrX 112881807 112881830 -53768466 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1446 492 356 34 5 chrX 112882066 112882444 -53767852 - L1MA7 LINE L1 -85 6206 5818 4 1446 1529 267 34 7 chrX 112882530 112882943 -53767353 - Lx3C LINE L1 -1 7008 6567 4 1446 1224 267 51 0 chrX 112883072 112883424 -53766872 - ORR1D1 LTR MaLR -2 372 3 4 1446 2322 83 0 0 chrX 112883932 112884244 -53766052 - L1_Mus2 LINE L1 -1 6565 6254 4 1446 22 56 0 0 chrX 112884249 112884285 -53766011 + AT_rich Low_complexity Low_complexity 1 36 0 4 1446 268 329 73 94 chrX 112884429 112884620 -53765676 - ORR1D1 LTR MaLR -187 187 1 4 1446 237 318 14 57 chrX 112884726 112884796 -53765500 - PB1D10 SINE Alu -46 71 5 4 1446 226 361 0 16 chrX 112884744 112884806 -53765490 - ID_B1 SINE B4 -87 137 77 4 1446 383 305 38 47 chrX 112884803 112885016 -53765280 + MER82 DNA MER2_type 143 353 -300 4 1446 23101 85 7 2 chrX 112885177 112889030 -53761266 - L1Md_F2 LINE L1 -8 6574 2702 4 1446 4769 147 22 38 chrX 112889312 112890217 -53760079 - RMER17A2 LTR ERVK -15 891 1 4 1446 194 91 30 0 chrX 112891049 112891082 -53759214 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 1446 213 315 9 0 chrX 112891106 112891217 -53759079 + (CA)n Simple_repeat Simple_repeat 2 113 0 5 1446 6371 107 22 18 chrX 112891710 112893070 -53757226 - L1_Mus2 LINE L1 0 6566 5201 5 1446 332 0 0 0 chrX 112893071 112893109 -53757187 - L1_Mm LINE L1 -467 5416 5379 5 1446 1611 186 11 3 chrX 112893111 112893397 -53756899 + RLTR27 LTR ERVK 1 288 -21 5 1446 23843 165 31 21 chrX 112893397 112898454 -53751842 - L1VL4 LINE L1 -506 5377 300 5 1446 210 37 0 0 chrX 112898486 112898513 -53751783 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 5 1446 205 205 0 0 chrX 112898610 112898649 -53751647 + A-rich Low_complexity Low_complexity 1 39 0 5 1446 24 32 0 0 chrX 112899030 112899061 -53751235 + AT_rich Low_complexity Low_complexity 1 31 0 5 1446 654 326 77 71 chrX 112900190 112900527 -53749769 - MTE2a LTR MaLR -21 358 20 5 1446 235 302 20 20 chrX 112900874 112900972 -53749324 + L1MD3 LINE L1 6745 6842 -1153 5 1446 423 0 0 0 chrX 112901002 112901049 -53749247 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1446 2466 105 94 3 chrX 112901050 112901432 -53748864 - BGLII LTR ERVK -4 417 1 5 1446 2796 239 31 50 chrX 112901434 112902404 -53747892 - RMER3D-int LTR ERVK 0 2842 1891 5 1446 2310 189 85 99 chrX 112902377 112903127 -53747169 - RMER3D-int LTR ERVK -1152 1690 430 5 1446 1398 79 0 14 chrX 112903150 112903510 -53746786 + (TTCCC)n Simple_repeat Simple_repeat 1 355 0 5 1446 352 176 15 0 chrX 112903510 112903578 -53746718 - RMER3D-int LTR ERVK -5156 2088 2028 5 1446 531 132 0 0 chrX 112903545 112903621 -53746675 - RMER3D-int LTR ERVK -2278 564 489 5 1446 685 191 30 44 chrX 112903752 112903955 -53746341 - RMER3D-int LTR ERVK -1991 851 652 5 1446 307 148 15 0 chrX 112903967 112904030 -53746266 - RMER3D-int LTR ERVK -5172 2072 2025 5 1446 558 135 56 0 chrX 112904440 112904529 -53745767 - BGLII LTR ERVK 0 421 328 5 1446 3599 158 45 5 chrX 112904529 112904645 -53745651 + L1_Mm LINE L1 5120 5239 -644 5 1446 423 0 0 0 chrX 112904645 112904692 -53745604 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1446 3599 158 45 5 chrX 112904692 112905237 -53745059 + L1_Mm LINE L1 5240 5807 -76 5 1446 1173 109 10 20 chrX 112905238 112905434 -53744862 - L1_Mus3 LINE L1 0 6638 6445 5 1446 6648 159 38 3 chrX 112905434 112906595 -53743701 + Lx2 LINE L1 5795 6996 -1 5 1446 295 318 167 34 chrX 112907665 112907836 -53742460 - MIR3 SINE MIR -91 185 13 5 1446 24 0 0 0 chrX 112907881 112907905 -53742391 + AT_rich Low_complexity Low_complexity 1 24 0 5 1446 270 0 0 0 chrX 112908144 112908174 -53742122 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 5 1446 30 77 0 0 chrX 112908792 112908857 -53741439 + AT_rich Low_complexity Low_complexity 1 65 0 5 1446 414 85 0 0 chrX 112909015 112909074 -53741222 + (TATAA)n Simple_repeat Simple_repeat 1 59 0 5 1446 43 39 0 25 chrX 112909864 112909905 -53740391 + AT_rich Low_complexity Low_complexity 1 41 0 5 1446 4824 142 11 24 chrX 112909905 112910736 -53739560 - Lx2 LINE L1 -2 6995 6176 5 1446 43 39 0 25 chrX 112910736 112910773 -53739523 + AT_rich Low_complexity Low_complexity 1 36 0 5 1446 24 32 0 0 chrX 112911385 112911416 -53738880 + AT_rich Low_complexity Low_complexity 1 31 0 5 1446 3382 165 53 29 chrX 112911518 112912236 -53738060 - RMER17A LTR ERVK -16 735 1 5 1446 722 11 11 0 chrX 112912841 112912928 -53737368 + (TCTA)n Simple_repeat Simple_repeat 4 91 0 5 1446 395 313 60 18 chrX 112913267 112913485 -53736811 - HERVL74-int LTR ERVL -2168 3517 3291 5 1446 384 325 10 96 chrX 112914487 112914695 -53735601 + MTE2b LTR MaLR 1 190 -189 5 1446 959 109 7 7 chrX 112914972 112915119 -53735177 + B1_Mus1 SINE Alu 2 148 0 5 1446 1158 122 0 0 chrX 112915128 112915308 -53734988 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 1446 1046 96 0 6 chrX 112915315 112915473 -53734823 + (GAAAA)n Simple_repeat Simple_repeat 4 160 0 5 1446 200 114 0 28 chrX 112915835 112915871 -53734425 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1446 270 309 10 0 chrX 112916737 112916834 -53733462 - L1M2 LINE L1 -2699 3444 3347 5 1446 390 311 59 0 chrX 112916857 112916992 -53733304 - B1F SINE Alu -5 144 2 5 1446 327 304 123 58 chrX 112917105 112917447 -53732849 - L1MC LINE L1 -2974 3172 2809 5 1446 26 30 0 0 chrX 112917560 112917593 -53732703 + AT_rich Low_complexity Low_complexity 1 33 0 5 1446 332 278 78 0 chrX 112917710 112917825 -53732471 - L1M4 LINE L1 -3541 2605 2482 5 1446 566 264 24 12 chrX 112918339 112918508 -53731788 - Lx7 LINE L1 -620 7076 6906 5 1446 306 344 34 53 chrX 112918511 112918720 -53731576 + L1MD3 LINE L1 6316 6520 -1362 5 1446 425 328 11 27 chrX 112918882 112919067 -53731229 + L1MD3 LINE L1 7503 7684 -311 5 1446 2157 46 0 4 chrX 112919112 112919431 -53730865 - L1Md_F3 LINE L1 0 6584 6300 5 1446 404 287 41 30 chrX 112919483 112919749 -53730547 + L1MD3 LINE L1 7670 7938 -57 5 1446 200 222 0 0 chrX 112919794 112919839 -53730457 + A-rich Low_complexity Low_complexity 1 45 0 5 1446 243 299 0 13 chrX 112920332 112920410 -53729886 - MLT1A0 LTR MaLR -27 338 262 5 1446 318 106 0 0 chrX 112920582 112920629 -53729667 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 1446 940 354 73 52 chrX 112920721 112921258 -53729038 - MLT-int LTR MaLR -7 1728 1181 5 1446 230 247 69 79 chrX 112921829 112921930 -53728366 + RMER6C LTR ERVK 113 212 -478 5 1446 237 153 0 48 chrX 112922655 112922717 -53727579 + (CAAAC)n Simple_repeat Simple_repeat 2 60 0 5 1446 5164 87 10 1 chrX 112923874 112924589 -53725707 + L1_Mus3 LINE L1 5918 6638 0 5 1446 24 0 0 0 chrX 112924589 112924613 -53725683 + AT_rich Low_complexity Low_complexity 1 24 0 5 1446 268 305 11 0 chrX 112924969 112925064 -53725232 + L1MA4 LINE L1 5837 5932 -368 5 1446 231 372 112 36 chrX 112925246 112925660 -53724636 + L2a LINE L2 2832 3282 -144 5 1446 317 226 0 61 chrX 112925839 112925905 -53724391 - RSINE1 SINE B4 -38 127 66 5 1446 495 0 0 0 chrX 112926034 112926089 -53724207 + (TA)n Simple_repeat Simple_repeat 1 55 0 5 1446 203 186 23 0 chrX 112926567 112926610 -53723686 + A-rich Low_complexity Low_complexity 4 47 0 5 1446 198 0 0 0 chrX 112926744 112926766 -53723530 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1446 2350 279 129 30 chrX 112927097 112928158 -53722138 + L1_Mur3 LINE L1 1449 2555 -3325 5 1446 549 44 0 0 chrX 112928158 112928226 -53722070 + (GA)n Simple_repeat Simple_repeat 2 69 0 5 1446 2350 279 129 30 chrX 112928226 112928872 -53721424 + L1_Mur3 LINE L1 2556 3323 -2557 5 1446 414 0 0 0 chrX 112928949 112928995 -53721301 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1446 242 316 120 20 chrX 112929316 112929416 -53720880 + MTE2a LTR MaLR 5 114 -265 5 1446 1274 290 107 13 chrX 112929427 112930024 -53720272 - Lx6 LINE L1 -3 7457 6507 5 1446 1116 261 22 7 chrX 112930102 112930380 -53719916 - Lx7 LINE L1 -395 7301 7020 5 1446 1002 244 198 12 chrX 112930714 112931038 -53719258 - MTD LTR MaLR -3 416 33 5 1446 765 120 0 0 chrX 112931038 112931155 -53719141 - URR1B DNA MER1_type 0 225 109 5 1446 2055 274 18 39 chrX 112931169 112931965 -53718331 + L1_Mur3 LINE L1 3451 4229 -1651 5 1446 188 172 0 17 chrX 112932065 112932124 -53718172 + (TTTG)n Simple_repeat Simple_repeat 2 59 0 5 1446 2304 218 70 14 chrX 112932219 112932735 -53717561 - Lx2B LINE L1 -5 6995 6451 5 1446 271 250 75 45 chrX 112932972 112933201 -53717095 + L1_Mur3 LINE L1 4232 4457 -1420 5 1446 5762 113 22 2 chrX 112933196 112934728 -53715568 + L1VL4 LINE L1 9 1558 -2001 5 1446 2391 292 70 47 chrX 112934697 112934938 -53715358 + Lx8 LINE L1 4417 4673 -1207 5 1446 192 97 0 0 chrX 112934938 112934969 -53715327 + (TAA)n Simple_repeat Simple_repeat 1 31 0 5 1446 2391 292 70 47 chrX 112934969 112935713 -53714583 + Lx8 LINE L1 4674 5454 -426 5 1446 1172 74 0 0 chrX 112935713 112935861 -53714435 + B1_Mus1 SINE Alu 1 148 0 5 1446 2391 303 76 39 chrX 112935861 112936550 -53713746 + Lx8 LINE L1 5455 6156 -1540 5 1446 1089 270 48 36 chrX 112936633 112936991 -53713305 + ORR1D2 LTR MaLR 8 369 -1 5 1446 1353 350 28 23 chrX 112936994 112937699 -53712597 + Lx8 LINE L1 6328 7036 -437 5 1446 1622 238 62 5 chrX 112937697 112938102 -53712194 + L1VL4 LINE L1 63 490 -5812 5 1446 1366 94 10 19 chrX 112938102 112938281 -53712015 + BGLII LTR ERVK 1 180 -241 5 1446 648 38 0 0 chrX 112938281 112938360 -53711936 + (GA)n Simple_repeat Simple_repeat 1 79 0 5 1446 1366 94 10 19 chrX 112938360 112938386 -53711910 + BGLII LTR ERVK 181 204 -217 5 1446 404 153 14 14 chrX 112938399 112938472 -53711824 + RLTR1C LTR ERV1 431 503 0 5 1446 2683 127 2 21 chrX 112938472 112938898 -53711398 + MMERGLN-int LTR ERV1 1 418 -7138 5 1446 320 107 273 26 chrX 112938969 112939046 -53711250 + MMVL30-int LTR ERV1 282 377 -2922 5 1446 216 67 0 0 chrX 112939083 112939113 -53711183 + (TCTG)n Simple_repeat Simple_repeat 2 31 0 5 1446 2540 95 125 3 chrX 112939394 112940001 -53710295 + MMVL30-int LTR ERV1 773 1453 -2245 5 1446 507 161 69 123 chrX 112940085 112940361 -53709935 + MMVL30-int LTR ERV1 960 1511 -2187 5 1446 188 152 87 0 chrX 112940489 112940535 -53709761 - MIR SINE MIR -114 148 99 5 1446 7735 84 28 9 chrX 112940621 112942702 -53707594 + MMVL30-int LTR ERV1 1501 3621 -77 5 1446 263 242 0 0 chrX 112942693 112942755 -53707541 + MMERGLN-int LTR ERV1 7431 7492 -64 5 1446 373 77 0 0 chrX 112942765 112942817 -53707479 + MMVL30-int LTR ERV1 3629 3680 -18 5 1446 924 112 5 91 chrX 112942817 112942835 -53707461 + BGLII LTR ERVK 252 266 -155 5 1446 3796 78 4 14 chrX 112942835 112943340 -53706956 + RLTR1C LTR ERV1 1 500 -3 5 1446 924 112 5 91 chrX 112943340 112943507 -53706789 + BGLII LTR ERVK 267 421 0 5 1446 618 202 0 85 chrX 112943554 112943624 -53706672 + RMER3D-int LTR ERVK 669 733 -2109 5 1446 3607 76 92 19 chrX 112943624 112944148 -53706148 - LTRIS2 LTR ERV1 0 564 3 5 1446 785 176 15 71 chrX 112944148 112944424 -53705872 + RMER3D-int LTR ERVK 354 572 -2270 5 1446 289 134 70 30 chrX 112944424 112944499 -53705797 + GA-rich Low_complexity Low_complexity 2 79 0 5 1446 1073 73 0 43 chrX 112944499 112944685 -53705611 + (GGAAA)n Simple_repeat Simple_repeat 3 180 0 5 1446 289 134 70 30 chrX 112944685 112944709 -53705587 + polypurine Low_complexity Low_complexity 80 105 0 5 1446 1623 190 105 18 chrX 112944735 112945231 -53705065 + RMER3D-int LTR ERVK 1014 1533 -1309 5 1446 500 223 32 51 chrX 112945271 112945427 -53704869 + RMER3D-int LTR ERVK 1541 1693 -1149 5 1446 2507 216 83 15 chrX 112945419 112946273 -53704023 + MYSERV16_I-int LTR ERVK 1297 2208 -118 5 1446 2707 99 37 5 chrX 112946341 112946747 -53703549 + BGLII LTR ERVK 1 419 -2 5 1446 12737 179 38 20 chrX 112946750 112950342 -53699954 + MusHAL1 LINE L1 633 4283 -1603 5 1446 878 45 0 0 chrX 112950342 112950453 -53699843 + B1_Mm SINE Alu 36 146 -1 5 1446 675 174 34 14 chrX 112950457 112950603 -53699693 + MusHAL1 LINE L1 4279 4427 -1450 5 1446 4549 160 44 32 chrX 112950600 112952228 -53698068 - L1Md_F LINE L1 -4021 1862 217 5 1446 21 0 0 0 chrX 112952405 112952426 -53697870 + AT_rich Low_complexity Low_complexity 1 21 0 5 1446 244 310 101 60 chrX 112952494 112952662 -53697634 - MTEa LTR MaLR -104 255 81 5 1446 319 260 19 86 chrX 112952732 112952837 -53697459 - MTEa LTR MaLR -281 98 1 5 1446 288 320 137 34 chrX 112952933 112953108 -53697188 + B4A SINE B4 100 292 0 5 1446 2098 135 45 3 chrX 112953127 112953484 -53696812 + Lx LINE L1 6283 6654 0 5 1446 567 29 0 0 chrX 112955194 112955263 -53695033 + (TC)n Simple_repeat Simple_repeat 2 70 0 5 1446 315 0 0 0 chrX 112955263 112955297 -53694999 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1446 258 295 121 64 chrX 112955679 112955820 -53694476 - MTE-int LTR MaLR -967 613 465 6 1446 235 85 43 0 chrX 112955905 112955952 -53694344 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 6 1446 1948 188 2 2 chrX 112956011 112956406 -53693890 + L1_Mm LINE L1 4540 4934 -949 6 1446 21 57 0 0 chrX 112956407 112956442 -53693854 + AT_rich Low_complexity Low_complexity 1 35 0 6 1446 4333 151 103 60 chrX 112956453 112957738 -53692558 - Lx LINE L1 -1 6653 5317 6 1446 5858 184 40 36 chrX 112957735 112957829 -53692467 + Lx2 LINE L1 4522 4615 -1268 6 1446 3432 36 7 5 chrX 112957829 112958251 -53692045 - L1Md_F3 LINE L1 0 6584 6162 6 1446 5925 187 40 12 chrX 112958251 112960523 -53689773 + Lx2 LINE L1 4616 7001 -7 6 1446 2696 121 14 0 chrX 112960543 112960958 -53689338 - BGLII LTR ERVK 0 421 1 6 1446 2509 219 60 43 chrX 112960965 112961842 -53688454 - RMER3D-int LTR ERVK -7 2835 1944 6 1446 25190 127 9 22 chrX 112961842 112963400 -53686896 + L1Md_A LINE L1 218 1982 -3901 6 1446 374 53 0 17 chrX 112963400 112963458 -53686838 + (CAAAA)n Simple_repeat Simple_repeat 2 58 0 6 1446 25190 79 11 3 chrX 112963458 112966409 -53683887 + L1Md_A LINE L1 1983 4944 -939 6 1446 1555 141 51 48 chrX 112966417 112966730 -53683566 - IAPLTR2b LTR ERVK -13 314 1 6 1446 6101 141 17 20 chrX 112966730 112967899 -53682397 - IAPEz-int LTR ERVK -383 7297 5525 6 1446 34007 103 7 5 chrX 112968566 112973921 -53676375 - IAPEz-int LTR ERVK -1233 5588 430 6 1446 453 167 42 50 chrX 112974133 112974253 -53676043 - IAPEz-int LTR ERVK -6702 119 1 6 1446 1699 147 24 49 chrX 112974261 112974589 -53675707 - IAPLTR2b LTR ERVK -7 320 1 6 1446 4585 76 11 6 chrX 112974589 112975241 -53675055 + L1Md_F2 LINE L1 4931 5585 -298 6 1446 7636 68 6 0 chrX 112975242 112976229 -53674067 + L1Md_F2 LINE L1 5587 6579 -3 6 1446 527 210 36 54 chrX 112976268 112976434 -53673862 - RMER3D-int LTR ERVK -1148 1694 1532 6 1446 1582 201 105 17 chrX 112976466 112976944 -53673352 - RMER3D-int LTR ERVK -1309 1533 1014 6 1446 21 36 0 0 chrX 112977065 112977093 -53673203 + AT_rich Low_complexity Low_complexity 1 28 0 6 1446 3488 20 2 0 chrX 112977298 112977693 -53672603 - MTA_Mm LTR MaLR 0 396 1 6 1446 9068 33 6 2 chrX 112977693 112978786 -53671510 - MTA_Mm-int LTR MaLR 0 1098 1 6 1446 3550 13 2 0 chrX 112978786 112979181 -53671115 - MTA_Mm LTR MaLR 0 396 1 6 1446 481 43 0 28 chrX 112979520 112979591 -53670705 + Lx LINE L1 6579 6647 -7 6 1446 4374 74 21 5 chrX 112979698 112980320 -53669976 + L1Md_F2 LINE L1 5881 6512 -70 6 1446 6078 128 38 1 chrX 112980320 112981657 -53668639 + L1_Mus4 LINE L1 5252 6635 -1 6 1446 3929 227 35 3 chrX 112981877 112982833 -53667463 - Lx3C LINE L1 -2 6974 5989 6 1446 270 77 58 0 chrX 112982828 112982880 -53667416 + L1Md_F2 LINE L1 6525 6579 -3 6 1446 254 270 68 14 chrX 112983451 112983635 -53666661 - Lx9 LINE L1 -1553 5920 5703 6 1446 1312 95 0 0 chrX 112983774 112983964 -53666332 - L1_Mur1 LINE L1 -406 5480 5291 6 180 3138 127 38 41 chrX 112983975 112984509 -53665787 + Lx3B LINE L1 6438 6969 -4 6 1447 22 0 0 0 chrX 112984514 112984536 -53665760 + AT_rich Low_complexity Low_complexity 1 22 0 6 1447 4423 205 11 36 chrX 112985415 112986209 -53664087 + Lx4A LINE L1 379 1001 -6085 6 1447 2849 40 11 250 chrX 112986209 112986833 -53663463 - IAPLTR2_Mm LTR ERVK 0 475 1 6 1447 12173 153 47 39 chrX 112986833 112987714 -53662582 + Lx4A LINE L1 1002 1891 -3986 6 1447 222 37 0 0 chrX 112987714 112987741 -53662555 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1447 12173 141 57 37 chrX 112987741 112988087 -53662209 + Lx4A LINE L1 1892 2232 -3645 6 1447 4141 122 8 3 chrX 112988087 112988719 -53661577 + Lx LINE L1 6016 6650 -4 6 1447 12173 141 57 37 chrX 112988719 112990411 -53659885 + Lx4A LINE L1 2233 3979 -1898 6 1447 2691 189 25 14 chrX 112990419 112990930 -53659366 + RMER19B LTR ERVK 374 890 -12 6 1447 2730 158 42 39 chrX 112990942 112991461 -53658835 + Lx4A LINE L1 4957 5447 -432 6 1447 234 224 74 62 chrX 112991438 112991519 -53658777 + RLTR25B LTR ERVK 428 509 -519 6 1447 727 62 0 0 chrX 112991461 112991557 -53658739 + B1_Mm SINE Alu 47 142 -5 6 1447 218 32 0 31 chrX 112991558 112991590 -53658706 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1447 5227 219 50 15 chrX 112991590 112993061 -53657235 + Lx4A LINE L1 5449 7057 -1 6 1447 27 0 0 0 chrX 112993127 112993154 -53657142 + AT_rich Low_complexity Low_complexity 1 27 0 6 1447 4256 93 0 20 chrX 112993419 112994022 -53656274 - L1Md_F2 LINE L1 -2 6580 5990 6 1447 1784 56 0 0 chrX 112994022 112994253 -53656043 - L1Md_F3 LINE L1 -246 6336 6106 6 1447 903 64 99 7 chrX 112994239 112994381 -53655915 + L1Md_F3 LINE L1 6413 6567 -17 6 1447 769 97 0 0 chrX 112994417 112994530 -53655766 - L1Md_F2 LINE L1 -583 5999 5887 6 1447 198 128 0 0 chrX 112995033 112995072 -53655224 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1447 233 356 0 121 chrX 112995559 112995658 -53654638 + B4A SINE B4 11 97 -195 6 1447 504 240 38 0 chrX 112996302 112996424 -53653872 - B1_Mur1 SINE Alu -8 141 2 6 1447 255 382 0 19 chrX 112996761 112996865 -53653431 - B1F2 SINE Alu -39 110 9 6 1447 351 44 0 0 chrX 112996933 112996978 -53653318 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1447 216 0 0 0 chrX 112997152 112997176 -53653120 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1447 422 340 20 0 chrX 112998133 112998286 -53652010 + MLT1A0 LTR MaLR 3 158 -207 6 1447 1289 249 42 8 chrX 112998373 112998729 -53651567 - ORR1D1 LTR MaLR -2 372 5 6 1447 2831 219 40 19 chrX 112998733 112999377 -53650919 - ORR1D1-int LTR MaLR 0 1792 730 6 1447 3536 153 3 2 chrX 112999387 113000000 -53650296 - Lx2 LINE L1 0 6997 6384 6 1447 985 140 0 25 chrX 113000000 113000161 -53650135 - Lx2 LINE L1 -614 6383 6227 1 1447 2851 245 28 53 chrX 113000176 113000496 -53649800 - ORR1D1-int LTR MaLR -638 732 420 2 1447 848 158 7 27 chrX 113000496 113000646 -53649650 - B1_Mm SINE Alu 0 147 1 3 1447 2851 245 28 53 chrX 113000646 113001076 -53649220 - ORR1D1-int LTR MaLR -951 419 1 2 1447 786 221 32 77 chrX 113001082 113001250 -53649046 - ORR1D1 LTR MaLR -7 367 194 2 1447 5465 36 6 1 chrX 113001250 113001919 -53648377 + L1Md_F3 LINE L1 5902 6573 -11 4 1447 786 221 32 77 chrX 113001919 113001971 -53648325 - ORR1D1 LTR MaLR -181 193 157 2 1447 654 171 20 0 chrX 113001971 113002123 -53648173 + GA-rich Low_complexity Low_complexity 2 156 0 5 1447 567 298 57 23 chrX 113002123 113002298 -53647998 - ORR1D1 LTR MaLR -193 181 1 2 1447 268 326 14 14 chrX 113002305 113002445 -53647851 + Lx9 LINE L1 7365 7504 -140 6 1447 22 0 0 0 chrX 113002454 113002476 -53647820 + AT_rich Low_complexity Low_complexity 1 22 0 7 1447 606 289 6 9 chrX 113002715 113002975 -53647321 + L1_Mur3 LINE L1 4123 4407 -1736 8 1447 191 103 0 25 chrX 113002977 113003017 -53647279 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 9 1447 614 290 152 16 chrX 113003049 113003305 -53646991 - ORR1D1 LTR MaLR -83 291 1 1 1447 1044 44 0 15 chrX 113003421 113003558 -53646738 + B1_Mus1 SINE Alu 14 148 0 1 1447 324 103 0 0 chrX 113003560 113003618 -53646678 + (CAAAA)n Simple_repeat Simple_repeat 2 59 0 1 1447 466 305 119 36 chrX 113003926 113004178 -53646118 - MTD LTR MaLR -11 389 117 1 1447 1012 121 7 0 chrX 113004178 113004327 -53645969 - Lx LINE L1 -259 6799 6650 1 1447 3512 107 9 13 chrX 113004323 113004345 -53645951 - L1_Mur1 LINE L1 -116 5770 5752 1 1447 2046 107 69 136 chrX 113004345 113004854 -53645442 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1447 3512 107 9 13 chrX 113004854 113005371 -53644925 - L1_Mur1 LINE L1 -135 5751 5233 1 1447 8154 96 7 23 chrX 113005369 113006624 -53643672 + L1_Mur1 LINE L1 4009 5243 -643 1 1447 5035 107 20 14 chrX 113006629 113007419 -53642877 - L1_Mus3 LINE L1 -1 6637 5843 1 1447 1741 109 0 0 chrX 113007431 113007679 -53642617 + L1_Mus3 LINE L1 5588 5835 -803 1 1447 6831 154 31 72 chrX 113007671 113009262 -53641034 - L1_Mur2 LINE L1 -2866 3011 1487 1 1447 1290 198 11 4 chrX 113009267 113009541 -53640755 - Lx LINE L1 -10 6644 6369 1 1447 834 256 15 0 chrX 113009541 113009736 -53640560 - L1_Mur2 LINE L1 -6449 263 66 1 1447 693 110 0 0 chrX 113009851 113009960 -53640336 + (CTTTG)n Simple_repeat Simple_repeat 1 109 0 2 1447 25 75 0 0 chrX 113010120 113010173 -53640123 + AT_rich Low_complexity Low_complexity 1 53 0 2 1447 36 62 0 0 chrX 113010506 113010570 -53639726 + AT_rich Low_complexity Low_complexity 1 64 0 2 1447 396 0 0 0 chrX 113010997 113011041 -53639255 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1447 414 0 0 0 chrX 113011041 113011086 -53639210 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 1447 215 127 70 0 chrX 113011214 113011285 -53639011 + (CAAA)n Simple_repeat Simple_repeat 2 77 0 2 1447 366 91 0 0 chrX 113012753 113012808 -53637488 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1447 477 0 0 0 chrX 113012808 113012860 -53637436 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 1447 26 64 0 0 chrX 113012923 113012970 -53637326 + AT_rich Low_complexity Low_complexity 1 47 0 2 1447 797 349 89 13 chrX 113013172 113013633 -53636663 - Lx8 LINE L1 -195 7278 6783 2 1447 2352 136 49 69 chrX 113013840 113014331 -53635965 + Lx2 LINE L1 6517 6997 0 3 1447 405 284 94 10 chrX 113014474 113014779 -53635517 - L1MA4A LINE L1 -233 5956 5585 3 1447 203 56 0 77 chrX 113015406 113015445 -53634851 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 3 1447 238 356 11 0 chrX 113016010 113016100 -53634196 - L2a LINE L2 0 3426 3336 3 1447 23 33 0 0 chrX 113016104 113016134 -53634162 + AT_rich Low_complexity Low_complexity 1 30 0 3 1447 250 263 74 25 chrX 113016228 113016349 -53633947 - ORR1D1 LTR MaLR -5 369 242 3 1447 23 86 0 0 chrX 113016361 113016419 -53633877 + AT_rich Low_complexity Low_complexity 1 58 0 3 1447 1575 188 29 3 chrX 113017034 113017344 -53632952 + RLTR9A LTR ERVK 3 320 -48 3 1447 37 39 0 0 chrX 113018273 113018324 -53631972 + AT_rich Low_complexity Low_complexity 1 51 0 3 1447 21 36 0 0 chrX 113018385 113018413 -53631883 + AT_rich Low_complexity Low_complexity 1 28 0 3 1447 368 350 63 19 chrX 113020110 113020317 -53629979 - B3A SINE B2 0 216 1 4 1447 21 71 0 0 chrX 113020433 113020475 -53629821 + AT_rich Low_complexity Low_complexity 1 42 0 4 1447 23 0 0 0 chrX 113020994 113021017 -53629279 + AT_rich Low_complexity Low_complexity 1 23 0 4 1447 549 97 0 21 chrX 113021348 113021443 -53628853 + L1_Mus2 LINE L1 6472 6564 -2 4 1447 991 291 30 56 chrX 113021540 113021970 -53628326 - MTD LTR MaLR 0 419 1 4 1447 592 156 61 30 chrX 113022184 113022316 -53627980 + ORR1B1 LTR MaLR 1 136 -258 4 1447 5292 150 100 7 chrX 113022455 113022532 -53627764 - L1_Mus4 LINE L1 0 6636 6537 4 1447 186 43 0 0 chrX 113022532 113022555 -53627741 + (CCCCCT)n Simple_repeat Simple_repeat 1 23 0 4 1447 6590 143 37 5 chrX 113022555 113024178 -53626118 - L1_Mus4 LINE L1 -100 6536 4845 4 1447 13550 132 29 14 chrX 113024174 113027178 -53623118 - L1VL1 LINE L1 -456 3242 192 4 1447 181 0 0 65 chrX 113027241 113027272 -53623024 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 4 1447 237 329 0 0 chrX 113027272 113027348 -53622948 - MLT1C LTR MaLR -79 388 313 5 1447 230 301 48 12 chrX 113027337 113027421 -53622875 - MLT1C LTR MaLR -182 208 122 5 1447 1801 195 25 31 chrX 113027437 113027829 -53622467 - ORR1B1 LTR MaLR 0 394 5 5 1447 37 62 0 0 chrX 113028124 113028189 -53622107 + AT_rich Low_complexity Low_complexity 1 65 0 5 1447 374 191 32 0 chrX 113029456 113029550 -53620746 + Lx2 LINE L1 6901 6997 0 5 1447 291 140 0 0 chrX 113031249 113031299 -53618997 + (A)n Simple_repeat Simple_repeat 1 50 0 5 1447 450 0 0 0 chrX 113031406 113031456 -53618840 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1447 23 33 0 0 chrX 113031838 113031868 -53618428 + AT_rich Low_complexity Low_complexity 1 30 0 5 1447 297 304 13 0 chrX 113032008 113032087 -53618209 + ID2 SINE ID 4 83 0 5 1447 578 147 18 0 chrX 113033158 113033267 -53617029 + GA-rich Low_complexity Low_complexity 2 112 0 5 1447 354 98 0 0 chrX 113033792 113033843 -53616453 + (TTCA)n Simple_repeat Simple_repeat 3 53 0 5 1447 296 157 0 0 chrX 113034175 113034226 -53616070 - Lx3C LINE L1 -7 6974 6924 6 1447 321 186 0 0 chrX 113034360 113034430 -53615866 + CT-rich Low_complexity Low_complexity 1 70 0 6 1447 836 114 0 7 chrX 113034430 113034580 -53615716 + (TG)n Simple_repeat Simple_repeat 2 150 0 6 1447 401 209 9 0 chrX 113034594 113034704 -53615592 + Lx9 LINE L1 7534 7644 0 6 1447 35 54 0 0 chrX 113034706 113034762 -53615534 + AT_rich Low_complexity Low_complexity 1 56 0 6 1447 21 57 0 0 chrX 113035178 113035213 -53615083 + AT_rich Low_complexity Low_complexity 1 35 0 6 1447 788 291 9 14 chrX 113035239 113035455 -53614841 - B3 SINE B2 0 216 2 6 1447 31 26 0 0 chrX 113035657 113035695 -53614601 + AT_rich Low_complexity Low_complexity 1 38 0 6 1447 341 234 14 135 chrX 113035745 113035893 -53614403 - Lx3C LINE L1 -136 6840 6711 6 1447 1872 176 8 25 chrX 113035898 113036266 -53614030 + L1_Mur2 LINE L1 5339 5700 -177 6 1447 831 285 22 22 chrX 113036268 113036494 -53613802 - B4A SINE B4 -62 230 5 6 1447 26 50 0 0 chrX 113036513 113036553 -53613743 + AT_rich Low_complexity Low_complexity 1 40 0 7 1447 279 0 0 0 chrX 113036607 113036638 -53613658 + (TC)n Simple_repeat Simple_repeat 2 32 0 7 1447 396 0 0 0 chrX 113036638 113036681 -53613615 + (TA)n Simple_repeat Simple_repeat 1 44 0 7 1447 5664 122 14 6 chrX 113036683 113037740 -53612556 + L1VL2 LINE L1 119 1186 -2429 7 1447 14321 192 20 11 chrX 113037739 113040778 -53609518 + L1_Mm LINE L1 2152 5220 -663 7 1447 2868 85 28 0 chrX 113044889 113045287 -53605009 - L1_Mus1 LINE L1 0 6567 6159 7 1447 221 192 19 37 chrX 113045792 113045846 -53604450 - L2a LINE L2 0 3426 3374 7 1447 627 255 0 28 chrX 113046498 113046643 -53603653 - B1_Mur1 SINE Alu -2 147 7 7 1447 342 61 0 0 chrX 113046893 113046942 -53603354 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1447 1475 312 5 5 chrX 113047805 113048239 -53602057 - Lx6 LINE L1 -39 7421 6988 7 1447 288 0 0 0 chrX 113048240 113048272 -53602024 + (TTG)n Simple_repeat Simple_repeat 2 33 0 8 1447 8790 112 4 2 chrX 113048272 113050318 -53599978 - L1_Mus2 LINE L1 -9 6557 4508 8 1447 1191 316 75 25 chrX 113050371 113051071 -53599225 - Lx6 LINE L1 -794 6902 6123 7 1447 438 53 0 0 chrX 113051083 113051140 -53599156 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 8 1447 29 0 0 0 chrX 113051304 113051333 -53598963 + AT_rich Low_complexity Low_complexity 1 29 0 8 1447 205 287 21 11 chrX 113051613 113051708 -53598588 + (TATATG)n Simple_repeat Simple_repeat 2 97 0 8 1447 2720 81 0 28 chrX 113052611 113053007 -53597289 + L1Md_F2 LINE L1 6195 6579 -3 8 1447 929 113 7 0 chrX 113053212 113053354 -53596942 - B1_Mus1 SINE Alu 0 148 6 8 1447 281 372 53 13 chrX 113053998 113054148 -53596148 - RMER15 LTR ERVL -123 452 297 8 1447 528 355 48 67 chrX 113054653 113055072 -53595224 + Lx8 LINE L1 7061 7471 -2 8 1447 907 272 104 0 chrX 113055520 113055818 -53594478 + Lx3C LINE L1 6618 6946 -30 8 1447 306 0 0 0 chrX 113055832 113055866 -53594430 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 9 1447 7384 180 23 13 chrX 113055901 113058047 -53592249 - Lx4A LINE L1 -2 7056 4880 9 1447 23 86 0 0 chrX 113058950 113059008 -53591288 + AT_rich Low_complexity Low_complexity 1 58 0 9 1447 534 70 0 0 chrX 113059320 113059391 -53590905 + (TA)n Simple_repeat Simple_repeat 2 72 0 9 1447 381 368 43 35 chrX 113059802 113060196 -53590100 + L1M2 LINE L1 2526 2922 -3221 9 1447 227 304 95 8 chrX 113060245 113060371 -53589925 + L1M4 LINE L1 3545 3681 -2465 9 1447 528 287 55 69 chrX 113060486 113060703 -53589593 + Lx9 LINE L1 6957 7170 -474 9 1447 1528 143 38 112 chrX 113060714 113061053 -53589243 + Lx LINE L1 6341 6654 0 9 1447 7309 91 14 4 chrX 113061143 113062227 -53588069 - L1_Mur1 LINE L1 -1744 4142 3048 9 1447 8751 103 43 17 chrX 113062222 113064077 -53586219 + Lx3_Mus LINE L1 5118 7009 0 9 1447 257 282 110 101 chrX 113064242 113064688 -53585608 + Lx9 LINE L1 7172 7621 -23 9 1447 25 31 0 0 chrX 113064691 113064723 -53585573 + AT_rich Low_complexity Low_complexity 1 32 0 1 1447 5071 148 24 20 chrX 113064877 113065767 -53584529 + Lx LINE L1 5739 6631 -23 1 1447 522 359 25 15 chrX 113065776 113065974 -53584322 + B3 SINE B2 9 208 -8 1 1447 1988 41 0 0 chrX 113065992 113066236 -53584060 + L1Md_F2 LINE L1 6318 6561 -21 1 1447 477 0 0 0 chrX 113066236 113066289 -53584007 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 1447 477 0 0 0 chrX 113066316 113066369 -53583927 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1447 369 0 0 0 chrX 113066369 113066409 -53583887 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1447 477 310 56 100 chrX 113066699 113067225 -53583071 - Tigger5 DNA MER2_type -2 2404 2150 1 1447 285 398 0 0 chrX 113067607 113067695 -53582601 - PB1D10 SINE Alu -29 88 1 1 1447 552 100 0 0 chrX 113067894 113067974 -53582322 + (TTTC)n Simple_repeat Simple_repeat 2 81 0 1 1447 276 296 20 0 chrX 113068021 113068119 -53582177 + Lx7 LINE L1 6978 7077 -619 1 1447 6062 37 1 1 chrX 113068778 113069511 -53580785 - L1Md_F3 LINE L1 -2 6582 5850 1 1447 27 81 0 0 chrX 113069665 113069727 -53580569 + AT_rich Low_complexity Low_complexity 1 62 0 1 1447 306 0 0 0 chrX 113070392 113070426 -53579870 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1447 50 65 0 0 chrX 113070707 113070799 -53579497 + AT_rich Low_complexity Low_complexity 1 92 0 1 1447 325 348 102 84 chrX 113071035 113071418 -53578878 + MLT-int LTR MaLR 1311 1700 -35 1 1447 459 0 0 0 chrX 113071760 113071811 -53578485 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 1 1447 368 357 21 0 chrX 113071813 113071956 -53578340 + MLT2D LTR ERVL 20 165 -249 1 1447 294 29 0 0 chrX 113072051 113072086 -53578210 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1447 2419 165 23 99 chrX 113072127 113072585 -53577711 - Lx3C LINE L1 -1 6975 6569 1 1447 1530 44 15 5 chrX 113072585 113072791 -53577505 - L1Md_F2 LINE L1 -2 6580 6373 1 1447 2419 165 23 99 chrX 113072791 113072898 -53577398 - Lx3C LINE L1 -408 6568 6453 1 1447 3541 124 10 19 chrX 113072918 113073495 -53576801 + L1_Mur1 LINE L1 4506 5077 -809 1 1447 1512 242 92 57 chrX 113073783 113074448 -53575848 - RMER6C LTR ERVK 0 690 3 1 1447 621 76 0 28 chrX 113074488 113074596 -53575700 + (GAAA)n Simple_repeat Simple_repeat 4 108 0 1 1447 1041 117 7 0 chrX 113075205 113075350 -53574946 + B1_Mm SINE Alu 1 146 -1 1 1447 4108 28 14 0 chrX 113076197 113076691 -53573605 + L1Md_T LINE L1 5085 5585 -298 1 1447 8201 41 0 0 chrX 113076692 113077688 -53572608 + L1Md_T LINE L1 5587 6582 0 1 1447 234 197 103 26 chrX 113078707 113078785 -53571511 + B1F1 SINE Alu 66 149 0 1 1447 24 53 0 0 chrX 113078873 113078911 -53571385 + AT_rich Low_complexity Low_complexity 1 38 0 1 1447 7007 84 28 0 chrX 113079187 113080385 -53569911 - L1_Mus1 LINE L1 -1 6566 5337 1 1447 4912 139 6 4 chrX 113080384 113081187 -53569109 + L1_Mus1 LINE L1 4535 5339 -544 1 1447 4337 43 0 0 chrX 113081205 113081734 -53568562 + L1Md_F2 LINE L1 5058 5586 -297 1 1447 7789 50 5 2 chrX 113081735 113082727 -53567569 + L1Md_F2 LINE L1 5588 6582 0 1 1447 219 36 0 0 chrX 113082834 113082862 -53567434 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 1 1447 380 35 68 23 chrX 113082906 113082994 -53567302 + (TTTTG)n Simple_repeat Simple_repeat 4 95 0 1 1447 24 0 0 0 chrX 113084070 113084094 -53566202 + AT_rich Low_complexity Low_complexity 1 24 0 1 1447 252 122 0 0 chrX 113085496 113085537 -53564759 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1447 270 68 43 54 chrX 113085665 113085758 -53564538 + (TA)n Simple_repeat Simple_repeat 2 93 0 1 1447 5184 120 27 9 chrX 113085800 113086655 -53563641 + L1_Mus3 LINE L1 5769 6638 0 1 1447 25 31 0 0 chrX 113086724 113086756 -53563540 + AT_rich Low_complexity Low_complexity 1 32 0 1 1447 365 0 0 22 chrX 113086875 113086921 -53563375 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 1 1447 1040 122 0 0 chrX 113086922 113087070 -53563226 - B1_Mus1 SINE Alu 0 148 1 1 1447 209 311 0 16 chrX 113087153 113087215 -53563081 - L2 LINE L2 -1056 2363 2303 1 1447 348 299 65 14 chrX 113087349 113087488 -53562808 + L1M4 LINE L1 4918 5063 -1083 1 1447 5026 148 20 18 chrX 113087575 113088473 -53561823 + Lx3A LINE L1 6082 6981 0 1 1447 24 32 0 0 chrX 113088787 113088818 -53561478 + AT_rich Low_complexity Low_complexity 1 31 0 1 1447 822 180 43 12 chrX 113091185 113091348 -53558948 + B2_Mm2 SINE B2 5 172 -23 1 1447 665 329 12 25 chrX 113091347 113091587 -53558709 - MT2A LTR ERVL -296 237 1 1 1447 277 417 112 17 chrX 113092888 113093120 -53557176 + L3 LINE CR1 2914 3167 -1322 1 1447 393 22 0 0 chrX 113093382 113093428 -53556868 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 1447 950 103 37 0 chrX 113093601 113093737 -53556559 - B1_Mus2 SINE Alu -5 142 2 1 1447 1696 233 24 74 chrX 113093808 113093983 -53556313 + MTD LTR MaLR 24 189 -230 1 1447 1471 137 23 8 chrX 113093983 113094241 -53556055 + L1_Mus4 LINE L1 6368 6629 -7 1 1447 1696 233 24 74 chrX 113094241 113094482 -53555814 + MTD LTR MaLR 190 419 0 1 1447 4093 130 15 6 chrX 113094566 113095225 -53555071 + Lx LINE L1 5989 6653 -1 1 1447 22 0 0 0 chrX 113095353 113095375 -53554921 + AT_rich Low_complexity Low_complexity 1 22 0 1 1447 401 374 50 60 chrX 113095490 113095789 -53554507 + MLT1A0 LTR MaLR 1 296 -69 1 1447 1078 82 7 0 chrX 113095831 113095978 -53554318 + B1_Mus1 SINE Alu 1 148 0 1 1447 1356 342 72 23 chrX 113095997 113096701 -53553595 + MLT1A0-int LTR MaLR 21 759 -976 1 1447 941 383 87 24 chrX 113096727 113097313 -53552983 + MLT1A0-int LTR MaLR 1113 1735 0 1 1447 372 318 45 38 chrX 113097321 113097478 -53552818 + MLT1A0 LTR MaLR 9 166 -199 1 1447 1903 163 13 3 chrX 113097505 113097818 -53552478 + Lx3B LINE L1 6518 6833 -140 1 1447 809 76 0 25 chrX 113097818 113097940 -53552356 + B1_Mus1 SINE Alu 30 148 0 1 1447 528 25 24 24 chrX 113097940 113098023 -53552273 + (CAAAAA)n Simple_repeat Simple_repeat 6 88 0 1 1447 534 219 58 0 chrX 113098025 113098162 -53552134 + Lx3B LINE L1 6826 6970 -3 1 1447 21 0 0 0 chrX 113098170 113098191 -53552105 + AT_rich Low_complexity Low_complexity 1 21 0 1 1447 192 299 29 15 chrX 113099208 113099276 -53551020 + L2c LINE L2 3300 3368 -19 1 1447 34 72 0 0 chrX 113099991 113100060 -53550236 + AT_rich Low_complexity Low_complexity 1 69 0 1 1447 3126 179 37 0 chrX 113100161 113100735 -53549561 + Lx2B LINE L1 6398 6992 -8 1 1447 731 291 0 5 chrX 113100761 113100961 -53549335 + B3 SINE B2 3 201 -15 1 1447 255 170 0 0 chrX 113102086 113102133 -53548163 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 1447 24 32 0 0 chrX 113102763 113102794 -53547502 + AT_rich Low_complexity Low_complexity 1 31 0 1 1447 3381 106 0 0 chrX 113103070 113103543 -53546753 - L1_Mur1 LINE L1 -123 5763 5291 1 1447 250 111 0 0 chrX 113103556 113103592 -53546704 - Lx3_Mus LINE L1 -1212 5797 5762 1 1447 27 49 0 0 chrX 113103638 113103679 -53546617 + AT_rich Low_complexity Low_complexity 1 41 0 1 1447 691 282 11 6 chrX 113103751 113103933 -53546363 - Lx6 LINE L1 -13 7447 7265 1 1447 692 312 71 20 chrX 113103933 113104414 -53545882 + Lx6 LINE L1 6457 7180 -280 1 1447 471 339 80 55 chrX 113104414 113104682 -53545614 + RLTR16 LTR ERVK 1 293 -275 1 1447 907 267 102 4 chrX 113105025 113105281 -53545015 + Lx6 LINE L1 7179 7459 -1 1 1447 900 311 80 0 chrX 113105319 113105728 -53544568 - Lx6 LINE L1 -189 7271 6778 1 1447 240 132 0 0 chrX 113105763 113105801 -53544495 + L1VL2 LINE L1 455 492 -5843 1 1447 9318 171 19 14 chrX 113105770 113108163 -53542133 + L1VL4 LINE L1 276 2676 -883 1 1447 1080 159 4 62 chrX 113108160 113108342 -53541954 + L1VL4 LINE L1 2967 3140 -419 1 1447 192 40 0 0 chrX 113108342 113108367 -53541929 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1 1447 1080 159 4 62 chrX 113108367 113108425 -53541871 + L1VL4 LINE L1 3141 3193 -366 1 1447 1159 231 8 8 chrX 113108424 113108660 -53541636 - Lx6 LINE L1 -761 6699 6464 1 1447 3056 208 40 13 chrX 113108723 113109652 -53540644 - Lx6 LINE L1 -1093 6367 5414 1 1447 443 341 100 25 chrX 113110530 113110810 -53539486 - ORR1E LTR MaLR 0 359 59 1 1447 486 137 0 0 chrX 113110824 113110919 -53539377 + (TG)n Simple_repeat Simple_repeat 1 95 0 1 1447 297 0 0 0 chrX 113112359 113112392 -53537904 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 1447 563 277 86 26 chrX 113112604 113112756 -53537540 - RSINE1 SINE B4 -2 163 3 1 1447 1263 94 0 0 chrX 113112840 113113020 -53537276 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1447 1062 103 0 14 chrX 113113027 113113175 -53537121 - B1_Mus1 SINE Alu -1 147 2 1 1447 21 57 0 0 chrX 113113260 113113295 -53537001 + AT_rich Low_complexity Low_complexity 1 35 0 1 1447 3659 133 11 13 chrX 113113477 113114096 -53536200 - Lx3_Mus LINE L1 0 7009 6392 1 1447 611 35 12 0 chrX 113114092 113114178 -53536118 - L1Md_T LINE L1 -1 6581 6495 1 1447 1049 8 0 0 chrX 113114178 113114296 -53536000 + L1_Mm LINE L1 5748 5865 -18 1 1447 2782 125 2 41 chrX 113114292 113114776 -53535520 - Lx3_Mus LINE L1 -632 6377 5913 1 1447 21 36 0 0 chrX 113114778 113114806 -53535490 + AT_rich Low_complexity Low_complexity 1 28 0 1 180 3087 307 93 39 chrX 113114855 113117641 -53532655 - Lx8 LINE L1 -121 7352 4391 1 1448 1262 257 136 3 chrX 113117662 113117994 -53532302 - MTD LTR MaLR -2 417 42 1 1448 1490 294 184 44 chrX 113117983 113118946 -53531350 - MTD-int LTR MaLR -86 1012 23 1 1448 1264 285 80 10 chrX 113118946 113119333 -53530963 - MTD LTR MaLR 0 419 6 1 1448 496 170 18 0 chrX 113119685 113119797 -53530499 + L1_Mus3 LINE L1 6517 6630 -8 1 1448 917 224 15 19 chrX 113119961 113120166 -53530130 + RMER5 LTR ERV1 1 204 -330 1 1448 4169 128 11 2 chrX 113120190 113120833 -53529463 - Lx3_Mus LINE L1 0 7009 6361 1 1448 567 272 78 15 chrX 113121137 113121342 -53528954 + RLTR45 LTR ERVK 265 482 0 1 1448 2632 124 40 7 chrX 113121342 113121664 -53528632 - Lx3_Mus LINE L1 -635 6374 6036 1 1448 180 0 0 0 chrX 113121664 113121684 -53528612 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 1 1448 2632 124 40 7 chrX 113121684 113121783 -53528513 - Lx3_Mus LINE L1 -974 6035 5940 1 1448 224 77 0 25 chrX 113121783 113121823 -53528473 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 1 1448 4299 82 20 19 chrX 113121823 113122468 -53527828 + Lx3_Mus LINE L1 5267 5907 -1102 1 1448 432 0 0 0 chrX 113122468 113122516 -53527780 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 1 1448 1083 244 57 30 chrX 113122526 113122826 -53527470 + RMER5 LTR ERV1 215 522 -12 1 1448 4190 148 44 10 chrX 113122969 113123690 -53526606 - Lx2A LINE L1 -1 7007 6262 1 1448 388 223 185 35 chrX 113123759 113123991 -53526305 - MTC LTR MaLR -5 414 117 1 1448 330 91 0 0 chrX 113124041 113124096 -53526200 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1 1448 419 333 33 5 chrX 113124099 113124310 -53525986 - ID_B1 SINE B4 -6 218 2 1 1448 650 367 76 19 chrX 113125226 113125490 -53524806 - B4 SINE B4 -2 290 12 2 1448 6563 149 11 11 chrX 113125712 113127498 -53522798 - Lx LINE L1 0 6654 4868 2 1448 669 289 5 74 chrX 113127498 113127715 -53522581 + MTD LTR MaLR 12 213 -206 2 1448 1215 193 178 0 chrX 113127715 113127990 -53522306 - L1_Mur2 LINE L1 -220 5666 5343 2 1448 2587 140 70 16 chrX 113128429 113128540 -53521756 - L1_Mur2 LINE L1 -531 5346 5233 2 1448 2969 33 60 0 chrX 113128540 113128908 -53521388 + RLTR10 LTR ERVK 1 390 0 2 1448 2587 140 70 16 chrX 113128908 113129282 -53521014 - L1_Mur2 LINE L1 -645 5232 4835 2 1448 1722 215 22 0 chrX 113129270 113129633 -53520663 + Lx5 LINE L1 5662 6032 -1018 2 1448 233 145 16 0 chrX 113130001 113130063 -53520233 + A-rich Low_complexity Low_complexity 2 64 0 2 1448 617 58 0 11 chrX 113130341 113130428 -53519868 + (TC)n Simple_repeat Simple_repeat 1 86 0 2 1448 993 122 0 0 chrX 113130437 113130585 -53519711 - B1_Mus1 SINE Alu 0 148 1 2 1448 327 104 0 0 chrX 113131040 113131088 -53519208 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1448 875 281 88 55 chrX 113131261 113131626 -53518670 - RLTR18B LTR ERVK -4 508 132 2 1448 573 292 28 67 chrX 113131661 113131841 -53518455 - RLTR18B LTR ERVK -337 175 3 2 1448 33 43 0 0 chrX 113132151 113132198 -53518098 + AT_rich Low_complexity Low_complexity 1 47 0 2 1448 417 381 44 0 chrX 113132208 113132368 -53517928 - B3 SINE B2 0 216 50 2 1448 1459 224 37 53 chrX 113132478 113132912 -53517384 - Lx6 LINE L1 -1367 6093 5667 2 1448 312 368 27 6 chrX 113132895 113133078 -53517218 + Lx6 LINE L1 6125 6311 -739 2 1448 1016 321 35 34 chrX 113133100 113133655 -53516641 + Lx6 LINE L1 6480 7437 -23 2 1448 24 0 0 0 chrX 113133659 113133683 -53516613 + AT_rich Low_complexity Low_complexity 1 24 0 2 1448 283 194 48 36 chrX 113133744 113133910 -53516386 + (TTATA)n Simple_repeat Simple_repeat 2 169 0 2 1448 520 175 12 53 chrX 113133911 113134080 -53516216 + Lx9 LINE L1 7476 7637 -7 2 1448 28 48 0 0 chrX 113134388 113134430 -53515866 + AT_rich Low_complexity Low_complexity 1 42 0 2 1448 311 187 0 32 chrX 113134430 113134524 -53515772 - Lx3A LINE L1 0 6981 6891 2 1448 432 0 0 0 chrX 113135314 113135362 -53514934 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1448 314 319 82 82 chrX 113135556 113135812 -53514484 + Lx8 LINE L1 7198 7453 -20 2 1448 983 215 56 23 chrX 113135837 113136064 -53514232 + ORR1C2 LTR MaLR 149 384 0 2 1448 585 345 32 49 chrX 113136227 113136574 -53513722 + Lx9 LINE L1 6474 6814 -830 2 1448 1058 112 6 0 chrX 113136764 113136933 -53513363 + (TTTTC)n Simple_repeat Simple_repeat 4 173 0 2 1448 181 216 0 22 chrX 113136934 113137024 -53513272 + T-rich Low_complexity Low_complexity 4 91 0 2 1448 514 253 12 58 chrX 113137410 113137582 -53512714 + RNLTR23 LTR ERVK 479 642 0 2 1448 404 202 0 33 chrX 113137590 113137682 -53512614 + RMER10A LTR ERVL 354 442 0 2 1448 23 33 0 0 chrX 113137783 113137813 -53512483 + AT_rich Low_complexity Low_complexity 1 30 0 2 1448 303 257 18 39 chrX 113138482 113138570 -53511726 - ORR1D2 LTR MaLR -264 95 12 2 1448 537 376 26 0 chrX 113138648 113138914 -53511382 - Lx8 LINE L1 -637 6836 6564 2 1448 504 0 0 0 chrX 113139706 113139762 -53510534 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 1448 4815 161 28 0 chrX 113139888 113140670 -53509626 - Lx4A LINE L1 -123 6935 6132 2 1448 1515 235 88 36 chrX 113140691 113140940 -53509356 - Lx2B LINE L1 -2 6998 6719 2 1448 7329 79 22 9 chrX 113140940 113141948 -53508348 + RLTR13D5 LTR ERVK 3 1023 0 2 1448 1515 235 88 36 chrX 113141948 113142174 -53508122 - Lx2B LINE L1 -282 6718 6498 2 1448 3093 61 2 8 chrX 113142716 113143114 -53507182 + MTA_Mm LTR MaLR 1 396 0 2 1448 1530 261 42 52 chrX 113143223 113143725 -53506571 + RMER5 LTR ERV1 1 497 -37 2 1448 355 282 26 13 chrX 113143804 113144082 -53506214 - L1M3 LINE L1 -969 5174 4828 2 1448 4989 106 35 17 chrX 113144085 113144863 -53505433 - L1_Mus3 LINE L1 0 6638 5847 2 1448 254 277 170 0 chrX 113144865 113144977 -53505319 + Lx9 LINE L1 7293 7423 -221 2 1448 780 91 0 0 chrX 113145069 113145179 -53505117 + (TTCC)n Simple_repeat Simple_repeat 3 112 0 2 1448 3123 200 17 5 chrX 113145187 113145790 -53504506 - Lx4A LINE L1 -2 7056 6447 2 1448 802 135 0 0 chrX 113145993 113146119 -53504177 - L1_Mur2 LINE L1 -1611 4266 4141 2 1448 1045 183 10 0 chrX 113146114 113146316 -53503980 + L1_Mm LINE L1 4279 4482 -1401 2 1448 660 108 0 0 chrX 113146301 113146394 -53503902 + Lx LINE L1 5692 5784 -870 2 1448 3638 44 48 0 chrX 113146394 113146851 -53503445 + L1Md_F2 LINE L1 6103 6581 -1 2 1448 4957 142 36 14 chrX 113146880 113147733 -53502563 + Lx LINE L1 5783 6654 0 2 1448 204 163 23 0 chrX 113147804 113147847 -53502449 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 2 1448 41 36 0 0 chrX 113147860 113147915 -53502381 + AT_rich Low_complexity Low_complexity 1 55 0 2 1448 571 104 26 17 chrX 113148178 113148295 -53502001 + (TA)n Simple_repeat Simple_repeat 2 119 0 2 1448 1052 103 0 0 chrX 113149052 113149192 -53501104 + B1_Mus1 SINE Alu 2 141 -7 2 1448 252 0 0 0 chrX 113149192 113149220 -53501076 + (CCA)n Simple_repeat Simple_repeat 1 28 0 2 1448 189 0 0 0 chrX 113149224 113149245 -53501051 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2 1448 1259 284 55 32 chrX 113149422 113149858 -53500438 + Lx7 LINE L1 56 501 -7227 2 1448 3002 44 0 0 chrX 113149939 113150301 -53499995 + L1Md_F2 LINE L1 5224 5585 -298 2 1448 7963 49 5 2 chrX 113150302 113151295 -53499001 + L1Md_F2 LINE L1 5587 6582 0 2 1448 1939 235 60 16 chrX 113151412 113151974 -53498322 + Lx7 LINE L1 2087 2617 -3529 2 1448 2075 254 61 33 chrX 113151985 113152556 -53497740 + Lx7 LINE L1 6267 6853 -843 2 1448 695 256 26 57 chrX 113154497 113154795 -53495501 + Lx6 LINE L1 5974 6252 -1444 2 1448 8776 16 0 0 chrX 113154795 113155791 -53494505 - L1Md_A LINE L1 0 6582 5587 2 1448 1313 229 43 103 chrX 113155795 113156125 -53494171 + Lx6 LINE L1 6240 6565 -895 2 1448 246 32 0 0 chrX 113156125 113156156 -53494140 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1448 1313 229 43 103 chrX 113156156 113156262 -53494034 + Lx6 LINE L1 6566 6650 -810 2 1448 446 285 51 0 chrX 113156264 113156401 -53493895 - Lx8 LINE L1 -244 7229 7086 2 1448 320 265 178 38 chrX 113156429 113156586 -53493710 + Lx8 LINE L1 6781 6959 -514 2 1448 398 321 75 46 chrX 113156806 113156979 -53493317 - B3 SINE B2 -1 215 38 2 1448 372 206 38 2 chrX 113156983 113157076 -53493220 + MTC LTR MaLR 5 99 -297 2 1448 341 271 71 0 chrX 113157054 113157139 -53493157 + B1_Mur2 SINE Alu 22 112 -37 2 1448 3560 184 45 17 chrX 113157116 113157870 -53492426 + ORR1B1-int LTR MaLR 735 1509 0 2 1448 851 191 37 7 chrX 113157876 113158060 -53492236 + ORR1B1 LTR MaLR 6 177 -217 2 1448 1459 183 28 21 chrX 113158060 113158350 -53491946 + MTC-int LTR MaLR 626 917 -341 2 1448 201 106 0 78 chrX 113158357 113158408 -53491888 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 2 1448 1124 207 41 53 chrX 113158413 113158651 -53491645 + MTC-int LTR MaLR 921 1154 -104 2 1448 388 35 17 17 chrX 113158651 113158710 -53491586 + (TTTTG)n Simple_repeat Simple_repeat 4 62 0 2 1448 1128 63 0 0 chrX 113158711 113158853 -53491443 - B1_Mus1 SINE Alu -6 142 1 2 1448 1124 207 41 53 chrX 113158853 113158954 -53491342 + MTC-int LTR MaLR 1155 1258 0 2 1448 1810 195 63 37 chrX 113158954 113159364 -53490932 + MTC LTR MaLR 1 421 0 2 1448 260 297 16 0 chrX 113159435 113159499 -53490797 - ORR1E LTR MaLR -282 77 13 2 1448 8762 163 119 11 chrX 113159722 113161194 -53489102 - Lx4A LINE L1 -5 7053 5428 2 1448 3082 58 13 144 chrX 113161194 113161741 -53488555 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1448 8762 156 53 18 chrX 113161741 113163183 -53487113 - Lx4A LINE L1 -450 5427 3929 2 1448 2115 171 44 0 chrX 113163376 113163763 -53486533 - Lx LINE L1 -7 6647 6244 2 1448 458 108 0 13 chrX 113164037 113164112 -53486184 + (CATA)n Simple_repeat Simple_repeat 3 76 0 2 1448 284 0 28 0 chrX 113164585 113164621 -53485675 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1448 4339 185 14 56 chrX 113164674 113164784 -53485512 - Lx2B LINE L1 -517 6483 6373 2 1448 341 146 0 68 chrX 113164784 113164872 -53485424 - Lx2A LINE L1 0 7008 6927 2 1448 4339 185 14 56 chrX 113164872 113165693 -53484603 - Lx2B LINE L1 -628 6372 5591 2 1448 2666 158 19 11 chrX 113165695 113166169 -53484127 - Lx2B LINE L1 -419 5458 4981 2 1448 1110 200 21 31 chrX 113166165 113166490 -53483806 - Lx2B LINE L1 -3622 2264 1943 2 1448 895 172 39 10 chrX 113166466 113166671 -53483625 - MusHAL1 LINE L1 -2148 1411 1201 2 1448 3018 52 29 3 chrX 113166678 113167064 -53483232 - MTA_Mm LTR MaLR 0 396 1 2 1448 7768 55 70 8 chrX 113167064 113168098 -53482198 - MTA_Mm-int LTR MaLR 0 1098 1 2 1448 3131 34 34 0 chrX 113168098 113168481 -53481815 - MTA_Mm LTR MaLR 0 396 1 2 1448 2549 171 18 10 chrX 113168481 113168912 -53481384 - MusHAL1 LINE L1 -2362 1197 753 2 1448 545 129 11 0 chrX 113168912 113169005 -53481291 + (TC)n Simple_repeat Simple_repeat 2 95 0 2 1448 1113 246 40 76 chrX 113169005 113169441 -53480855 - Lx2B LINE L1 -5467 1167 733 2 1448 318 26 0 0 chrX 113169732 113169771 -53480525 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1448 377 281 35 0 chrX 113169851 113169965 -53480331 - Lx5 LINE L1 -5 7045 6928 2 1448 232 244 46 11 chrX 113170016 113170103 -53480193 + A-rich Low_complexity Low_complexity 1 90 0 2 1448 22 35 0 0 chrX 113170614 113170643 -53479653 + AT_rich Low_complexity Low_complexity 1 29 0 2 1448 25 65 0 0 chrX 113171010 113171056 -53479240 + AT_rich Low_complexity Low_complexity 1 46 0 2 1448 231 343 0 14 chrX 113171831 113171902 -53478394 + PB1D10 SINE Alu 43 112 -5 2 1448 986 313 68 35 chrX 113171920 113172317 -53477979 + MTD LTR MaLR 8 417 -2 2 1448 462 329 87 12 chrX 113172695 113172867 -53477429 - B3A SINE B2 -3 195 11 2 1448 7891 42 3 1 chrX 113172931 113173887 -53476409 - L1Md_F2 LINE L1 -2 6580 5623 2 1448 2892 58 0 14 chrX 113173889 113174257 -53476039 + L1Md_F2 LINE L1 5289 5651 -232 2 1448 582 241 44 0 chrX 113175096 113175233 -53475063 + B1_Mur1 SINE Alu 1 143 -6 2 1448 21 36 0 0 chrX 113175419 113175447 -53474849 + AT_rich Low_complexity Low_complexity 1 28 0 2 1448 1085 70 0 0 chrX 113175823 113175965 -53474331 + B1_Mus2 SINE Alu 1 142 -5 2 1448 639 26 0 0 chrX 113175971 113176048 -53474248 + (GA)n Simple_repeat Simple_repeat 2 78 0 2 1448 2394 89 104 94 chrX 113176258 113176728 -53473568 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1448 201 175 0 0 chrX 113177772 113177812 -53472484 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1448 21 36 0 0 chrX 113178913 113178941 -53471355 + AT_rich Low_complexity Low_complexity 1 28 0 2 1448 23 33 0 0 chrX 113179068 113179098 -53471198 + AT_rich Low_complexity Low_complexity 1 30 0 2 1448 29 84 0 0 chrX 113179144 113179215 -53471081 + AT_rich Low_complexity Low_complexity 1 71 0 2 1448 24 53 0 0 chrX 113179237 113179275 -53471021 + AT_rich Low_complexity Low_complexity 1 38 0 2 1448 263 259 0 18 chrX 113179460 113179515 -53470781 + B4 SINE B4 3 56 -236 2 1448 867 275 148 26 chrX 113179539 113179890 -53470406 + MTD LTR MaLR 26 419 0 2 1448 27 62 0 0 chrX 113180074 113180122 -53470174 + AT_rich Low_complexity Low_complexity 1 48 0 2 1448 30 0 0 0 chrX 113180568 113180598 -53469698 + AT_rich Low_complexity Low_complexity 1 30 0 3 1448 472 221 18 9 chrX 113180611 113180725 -53469571 - Lx4B LINE L1 -8 7050 6936 3 1448 5876 171 42 29 chrX 113180725 113181883 -53468413 - Lx4B LINE L1 -213 6845 5672 3 1448 1213 292 62 96 chrX 113181883 113182656 -53467640 + RLTR22_Mur LTR ERVK 1 747 -1101 3 1448 2323 131 14 19 chrX 113182667 113183088 -53467208 + L1_Mur2 LINE L1 2692 3110 -2767 3 1448 703 328 85 60 chrX 113183181 113183547 -53466749 + MTEa LTR MaLR 1 375 -4 3 1448 233 231 0 15 chrX 113184258 113184307 -53465989 + (TA)n Simple_repeat Simple_repeat 1 48 0 3 1448 351 0 0 0 chrX 113184307 113184346 -53465950 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1448 233 231 0 15 chrX 113184346 113184362 -53465934 + (TA)n Simple_repeat Simple_repeat 1 16 0 3 1448 438 79 0 0 chrX 113185187 113185250 -53465046 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1448 304 321 18 0 chrX 113185431 113185540 -53464756 + PB1D10 SINE Alu 1 111 -6 3 1448 310 344 23 0 chrX 113186027 113186158 -53464138 - L1MC LINE L1 -1423 4723 4590 3 1448 867 206 22 1 chrX 113186158 113186335 -53463961 - Lx2 LINE L1 -221 6776 6596 3 1448 453 164 64 46 chrX 113186325 113186434 -53463862 + Lx2B LINE L1 6245 6355 -645 3 1448 1283 287 27 30 chrX 113186644 113187017 -53463279 + ORR1D1 LTR MaLR 1 372 -2 3 1448 1029 94 0 0 chrX 113187030 113187168 -53463128 + B1_Mus1 SINE Alu 10 147 -1 3 1448 234 0 0 0 chrX 113187168 113187194 -53463102 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 1448 30 0 0 0 chrX 113187280 113187310 -53462986 + AT_rich Low_complexity Low_complexity 1 30 0 3 1448 195 42 0 0 chrX 113187370 113187394 -53462902 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 1448 276 143 0 0 chrX 113187394 113187450 -53462846 + (GA)n Simple_repeat Simple_repeat 2 57 0 3 1448 561 138 0 0 chrX 113188028 113188122 -53462174 + (TA)n Simple_repeat Simple_repeat 2 95 0 3 1448 10097 179 32 47 chrX 113188353 113190282 -53460014 + Lx2B LINE L1 3705 5671 -206 3 1448 4050 81 24 32 chrX 113190282 113190904 -53459392 - L1_Mus2 LINE L1 0 6566 5982 3 1448 229 300 33 16 chrX 113190905 113190966 -53459330 - RSINE1 SINE B4 -68 97 36 3 1448 10097 179 32 47 chrX 113190966 113191054 -53459242 + Lx2B LINE L1 5673 5746 -1254 3 1448 3189 96 4 24 chrX 113191054 113191522 -53458774 + L1_Mus3 LINE L1 6174 6632 -6 3 1448 10097 224 63 10 chrX 113191522 113192671 -53457625 + Lx2B LINE L1 5741 6969 -31 3 1448 1140 29 0 0 chrX 113192674 113192810 -53457486 + (TCTCCC)n Simple_repeat Simple_repeat 3 138 0 3 1448 18471 158 38 19 chrX 113192810 113196915 -53453381 - Lx3C LINE L1 -6 6970 2787 3 1448 2031 143 16 0 chrX 113196915 113197237 -53453059 - ORR1A2 LTR MaLR 0 327 1 3 1448 18471 151 26 16 chrX 113197237 113197691 -53452605 - Lx3C LINE L1 -3100 2786 2324 3 1448 534 287 78 14 chrX 113197735 113197954 -53452342 + Lx8 LINE L1 6764 6996 -477 3 1448 8189 42 1 0 chrX 113198456 113199580 -53450716 - L1Md_F2 LINE L1 -10 6572 5448 3 1448 5790 167 49 1 chrX 113200405 113201466 -53448830 + Lx2 LINE L1 5885 6996 -1 3 1448 2672 256 75 30 chrX 113201482 113202311 -53447985 + Lx7 LINE L1 6757 7622 -74 3 1448 348 289 71 59 chrX 113202926 113203095 -53447201 + RMER17C-int LTR ERVK 228 398 -2840 3 1448 252 260 45 107 chrX 113203159 113203271 -53447025 + RMER17C-int LTR ERVK 420 524 -2714 3 1448 5422 299 38 43 chrX 113203249 113205251 -53445045 + RodERV21-int LTR ERV1 729 2718 -2273 3 1448 372 353 25 46 chrX 113205373 113205697 -53444599 + RodERV21-int LTR ERV1 3587 3903 -3188 3 1448 243 0 0 0 chrX 113206357 113206384 -53443912 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1448 339 315 21 27 chrX 113206738 113206924 -53443372 + RodERV21-int LTR ERV1 4943 5127 -1964 3 1448 4398 76 24 3 chrX 113207125 113207717 -53442579 - L1Md_F2 LINE L1 -12 6570 5967 3 1448 251 213 0 0 chrX 113208032 113208079 -53442217 + MuLV-int LTR ERV1 4890 4936 -2670 3 1448 6550 173 6 16 chrX 113208082 113209242 -53441054 + Lx3C LINE L1 5508 6652 -324 3 1448 3966 205 31 41 chrX 113209242 113210154 -53440142 + RMER13B LTR ERVK 5 907 -1 3 1448 6550 266 16 49 chrX 113210154 113210575 -53439721 + Lx3C LINE L1 6647 7025 -33 3 1448 189 0 0 0 chrX 113210594 113210615 -53439681 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 3 1448 273 354 56 19 chrX 113210676 113210837 -53439459 + L2 LINE L2 2301 2467 -952 3 1448 5517 144 60 46 chrX 113211150 113212191 -53438105 + RLTR21 LTR ERVK 142 1200 -372 3 1448 2076 111 9 58 chrX 113212191 113212535 -53437761 + ORR1A2 LTR MaLR 1 327 0 3 1448 5517 144 60 46 chrX 113212535 113212572 -53437724 + RLTR21 LTR ERVK 1201 1235 -337 3 1448 267 31 0 0 chrX 113212572 113212604 -53437692 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1448 336 210 0 46 chrX 113212619 113212684 -53437612 + RMER12B LTR ERVK 1341 1402 -2 3 1448 365 173 13 13 chrX 113212780 113212856 -53437440 + Lx7 LINE L1 7230 7305 -391 3 1448 21 36 0 0 chrX 113213010 113213038 -53437258 + AT_rich Low_complexity Low_complexity 1 28 0 3 1448 191 36 36 0 chrX 113213271 113213299 -53436997 + (TTA)n Simple_repeat Simple_repeat 2 30 0 3 1448 468 244 152 16 chrX 113213301 113213426 -53436870 + B1_Mus1 SINE Alu 7 148 0 3 1448 379 211 36 18 chrX 113214327 113214438 -53435858 - L1MB4 LINE L1 -6383 224 112 3 1448 390 221 0 10 chrX 113214923 113215019 -53435277 + MER2 DNA MER2_type 115 209 -136 3 1448 1113 256 22 32 chrX 113215186 113215497 -53434799 - RMER5 LTR ERV1 -22 512 205 3 1448 385 261 160 8 chrX 113215811 113215942 -53434354 + RMER10A LTR ERVL 3 153 -289 3 1448 453 163 0 0 chrX 113216215 113216307 -53433989 + GA-rich Low_complexity Low_complexity 3 94 0 3 1448 1212 101 0 0 chrX 113216307 113216485 -53433811 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 3 1448 1738 275 64 12 chrX 113216534 113216918 -53433378 + Lx6 LINE L1 6914 7318 -142 3 1448 951 0 25 0 chrX 113216918 113217037 -53433259 + (TTTTC)n Simple_repeat Simple_repeat 3 124 0 3 1448 1738 275 64 12 chrX 113217037 113217134 -53433162 + Lx6 LINE L1 7319 7420 -40 3 1448 10045 138 35 51 chrX 113217156 113219034 -53431262 + RLTR22_Mur LTR ERVK 1 1848 0 3 1448 369 0 0 0 chrX 113219147 113219188 -53431108 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1448 225 94 0 0 chrX 113219869 113219901 -53430395 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1448 1022 96 0 0 chrX 113220312 113220447 -53429849 - B1_Mm SINE Alu -12 135 1 3 1448 243 0 0 0 chrX 113220727 113220754 -53429542 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1448 1380 344 88 55 chrX 113220756 113222613 -53427683 - RodERV21-int LTR ERV1 -314 4677 2759 3 1448 1015 219 74 34 chrX 113223783 113224228 -53426068 - BGLII_B LTR ERVK -233 459 1 3 1448 213 65 0 0 chrX 113224492 113224523 -53425773 + (TTG)n Simple_repeat Simple_repeat 1 31 0 3 1448 702 75 0 0 chrX 113224555 113224661 -53425635 + (TG)n Simple_repeat Simple_repeat 1 106 0 3 1448 12999 129 8 4 chrX 113224900 113227111 -53423185 - L1Md_F LINE L1 -2591 3292 1071 3 1448 2259 224 4 11 chrX 113227090 113227291 -53423005 - L1Md_F LINE L1 -5864 1222 1071 3 1448 2570 95 0 0 chrX 113227291 113227637 -53422659 - ORR1A1 LTR MaLR 0 346 1 3 1448 2259 246 72 67 chrX 113227637 113228614 -53421682 - L1Md_F LINE L1 -5527 1111 217 3 1448 1339 62 28 0 chrX 113228795 113228974 -53421322 - B2_Mm1t SINE B2 -8 185 2 3 1448 1065 206 0 22 chrX 113229913 113230137 -53420159 - RodERV21-int LTR ERV1 -4020 971 753 3 1448 449 150 10 0 chrX 113230452 113230552 -53419744 + GA-rich Low_complexity Low_complexity 2 102 0 3 1448 258 56 0 0 chrX 113231124 113231160 -53419136 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 3 1448 25 65 0 0 chrX 113231289 113231335 -53418961 + AT_rich Low_complexity Low_complexity 1 46 0 3 1448 1234 294 38 42 chrX 113231446 113231609 -53418687 + RMER5 LTR ERV1 33 196 -338 3 1448 180 0 0 0 chrX 113231609 113231629 -53418667 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1448 1234 294 38 42 chrX 113231629 113231969 -53418327 + RMER5 LTR ERV1 197 534 0 3 1448 1424 324 59 27 chrX 113232180 113232806 -53417490 + Lx9 LINE L1 6730 7375 -269 3 1448 413 303 8 16 chrX 113233254 113233378 -53416918 - Lx8 LINE L1 -905 6568 6446 3 1448 4417 76 2 18 chrX 113233451 113234057 -53416239 + L1Md_F2 LINE L1 5987 6582 0 3 1448 955 85 0 0 chrX 113234074 113234204 -53416092 + B1_Mm SINE Alu 3 132 -15 3 1448 501 68 0 0 chrX 113234204 113234278 -53416018 + (CA)n Simple_repeat Simple_repeat 1 74 0 3 1448 544 209 7 41 chrX 113234278 113234291 -53416005 + ID_B1 SINE B4 210 222 -2 3 1448 524 300 92 58 chrX 113234499 113235023 -53415273 + L1MD LINE L1 3946 4478 -1668 3 1448 5805 130 46 4 chrX 113235023 113235965 -53414331 + Lx2 LINE L1 6010 6990 -7 3 1448 524 300 92 58 chrX 113235965 113236331 -53413965 + L1MD LINE L1 4479 4866 -1280 3 1448 214 106 43 0 chrX 113236341 113236388 -53413908 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1448 409 319 100 32 chrX 113236428 113236677 -53413619 - RLTR41 LTR ERV1 0 446 181 3 1448 645 14 0 0 chrX 113236730 113236804 -53413492 + (TTTC)n Simple_repeat Simple_repeat 3 76 0 3 1448 712 98 0 0 chrX 113236807 113236909 -53413387 - B1_Mus2 SINE Alu -3 144 43 3 1448 1866 97 43 0 chrX 113236909 113237187 -53413109 + L1_Mus3 LINE L1 6342 6631 -7 3 1448 229 279 32 16 chrX 113237203 113237265 -53413031 - RLTR41 LTR ERV1 -323 123 61 3 1448 507 254 0 0 chrX 113237511 113237649 -53412647 + (TA)n Simple_repeat Simple_repeat 1 138 0 3 1448 2571 192 52 16 chrX 113237744 113238301 -53411995 - RLTR20B3 LTR ERVK 0 577 1 3 1448 633 27 0 0 chrX 113239028 113239103 -53411193 + (TTCC)n Simple_repeat Simple_repeat 4 78 0 3 1448 288 77 0 0 chrX 113239103 113239142 -53411154 + (TC)n Simple_repeat Simple_repeat 1 39 0 3 1448 265 197 0 156 chrX 113239287 113239377 -53410919 - RLTR11A LTR ERVK -3 524 449 3 1448 1081 75 0 0 chrX 113239379 113239525 -53410771 - L1_Mus3 LINE L1 -665 5973 5828 3 1448 833 90 15 8 chrX 113239525 113239659 -53410637 + L1_Mus3 LINE L1 6498 6632 -6 3 1448 1207 218 153 36 chrX 113239660 113240057 -53410239 - RLTR11A LTR ERVK -72 455 1 3 1448 237 292 88 22 chrX 113240135 113240226 -53410070 - RMER10A LTR ERVL -28 414 318 3 1448 207 0 0 0 chrX 113240390 113240413 -53409883 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1448 857 265 41 74 chrX 113241166 113241334 -53408962 - RMER17C LTR ERVK -57 353 207 3 1448 294 106 0 0 chrX 113241334 113241381 -53408915 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1448 857 265 41 74 chrX 113241381 113241575 -53408721 - RMER17C LTR ERVK -204 206 3 3 1448 1583 221 121 72 chrX 113241696 113242184 -53408112 + RLTR1B LTR ERV1 1 512 0 3 1448 255 61 0 0 chrX 113242416 113242449 -53407847 + (TATG)n Simple_repeat Simple_repeat 2 34 0 3 1448 467 232 116 0 chrX 113242658 113242770 -53407526 - MTE2a LTR MaLR 0 379 255 4 1448 235 204 56 0 chrX 113242918 113242972 -53407324 - RLTR42 LTR ERVK -182 57 1 4 1448 220 329 24 37 chrX 113243368 113243450 -53406846 + PB1D9 SINE Alu 10 90 -30 4 1448 569 239 174 11 chrX 113243450 113243640 -53406656 - MTD LTR MaLR 0 419 199 4 1448 3873 119 28 2 chrX 113243659 113244485 -53405811 - Lx LINE L1 -602 6052 5205 4 1448 2722 218 66 8 chrX 113244480 113245133 -53405163 - L1_Mur3 LINE L1 -6493 1219 529 4 1448 529 119 10 10 chrX 113245246 113245348 -53404948 + (TAGA)n Simple_repeat Simple_repeat 3 104 0 4 22 1244 292 62 22 chrX 113245749 113246425 -53403871 + L1M3 LINE L1 4054 4756 -1384 4 1449 381 306 81 0 chrX 113246437 113246561 -53403735 + B1_Mur2 SINE Alu 3 136 -13 4 1449 248 49 49 0 chrX 113246568 113246609 -53403687 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1449 408 325 6 69 chrX 113246763 113246938 -53403358 + RSINE1 SINE B4 2 165 0 4 1449 236 239 21 52 chrX 113246962 113247031 -53403265 + L1M3 LINE L1 4901 4971 -1169 4 1449 1619 180 27 60 chrX 113247031 113247367 -53402929 - ORR1A3 LTR MaLR -1 325 1 4 1449 236 239 21 52 chrX 113247367 113247394 -53402902 + L1M3 LINE L1 4972 4994 -1146 4 1449 257 441 39 26 chrX 113247395 113247551 -53402745 + RSINE1 SINE B4 8 165 0 4 1449 414 0 0 0 chrX 113247552 113247598 -53402698 + (TAA)n Simple_repeat Simple_repeat 3 48 0 4 1449 395 267 47 60 chrX 113247603 113247818 -53402478 + L1MA5 LINE L1 6087 6298 -2 4 1449 267 331 11 7 chrX 113248009 113248136 -53402160 + ID2 SINE ID 1 128 -24 4 1449 270 56 0 0 chrX 113248480 113248516 -53401780 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1449 186 103 0 0 chrX 113248912 113248941 -53401355 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1449 376 378 33 25 chrX 113248985 113249107 -53401189 - RSINE1 SINE B4 -40 125 3 4 1449 290 294 43 2 chrX 113249133 113249287 -53401009 + L1M3 LINE L1 5699 5856 -324 4 1449 492 316 138 66 chrX 113249303 113249622 -53400674 + ORR1E LTR MaLR 14 355 -4 4 1449 516 105 0 0 chrX 113249858 113249934 -53400362 + (TA)n Simple_repeat Simple_repeat 2 77 0 4 1449 440 351 37 5 chrX 113249955 113250144 -53400152 - B3A SINE B2 -1 197 3 4 1449 1320 237 36 17 chrX 113250484 113250831 -53399465 - Lx2B LINE L1 -84 6916 6249 4 1449 1206 252 43 84 chrX 113250831 113251199 -53399097 + RLTR28B LTR ERVL 111 463 -18 4 1449 504 86 0 0 chrX 113251484 113251554 -53398742 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 1449 849 325 12 8 chrX 113251903 113252145 -53398151 - B4A SINE B4 -49 243 1 4 1449 22 0 0 0 chrX 113252242 113252264 -53398032 + AT_rich Low_complexity Low_complexity 1 22 0 4 1449 1924 106 20 3 chrX 113252308 113252610 -53397686 - L1_Mus3 LINE L1 -6 6632 6326 4 1449 191 88 29 0 chrX 113252923 113252957 -53397339 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1449 1011 116 0 20 chrX 113252962 113252973 -53397323 - B1_Mus2 SINE Alu 0 147 139 4 1449 582 28 0 0 chrX 113252973 113253045 -53397251 + (GTTTG)n Simple_repeat Simple_repeat 2 73 0 4 1449 1011 116 0 20 chrX 113253045 113253183 -53397113 - B1_Mus2 SINE Alu -9 138 1 4 1449 1061 308 98 40 chrX 113253186 113254059 -53396237 - L1_Mur3 LINE L1 -64 5816 4893 4 1449 352 355 7 0 chrX 113254073 113254214 -53396082 + Lx8 LINE L1 6979 7120 -353 4 1449 898 354 52 63 chrX 113254243 113254864 -53395432 - RLTR18 LTR ERVK -2 614 1 4 1449 259 392 57 28 chrX 113254868 113255044 -53395252 + Lx8 LINE L1 7147 7327 -146 4 1449 375 23 0 0 chrX 113255044 113255088 -53395208 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1449 325 282 0 56 chrX 113255118 113255208 -53395088 + RLTR18 LTR ERVK 4 88 -528 4 1449 183 114 0 0 chrX 113255407 113255442 -53394854 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1449 208 108 54 0 chrX 113255455 113255492 -53394804 + A-rich Low_complexity Low_complexity 1 39 0 4 1449 402 294 8 60 chrX 113255930 113256064 -53394232 - RMER15-int LTR ERVL -2789 2210 2084 4 1449 848 309 0 28 chrX 113256119 113256332 -53393964 + B3 SINE B2 1 207 -9 4 1449 1211 382 16 8 chrX 113256482 113257125 -53393171 - RMER15-int LTR ERVL -4350 649 2 4 1449 414 279 118 52 chrX 113257135 113257347 -53392949 - RMER15 LTR ERVL -14 561 336 4 1449 6256 139 53 20 chrX 113258252 113260091 -53390205 + L1_Mur1 LINE L1 3 2164 -3722 4 1449 1283 219 45 31 chrX 113260091 113260445 -53389851 + RLTR10D LTR ERVK 1 359 0 4 1449 18181 262 21 16 chrX 113260447 113265599 -53384697 + IAP-d-int LTR ERVK 3 5176 -1366 4 1449 2364 225 7 17 chrX 113265587 113266179 -53384117 + IAP-d-int LTR ERVK 5474 6059 -483 4 1449 2047 181 24 11 chrX 113266219 113266598 -53383698 + IAP-d-int LTR ERVK 6159 6542 0 4 1449 1228 235 40 25 chrX 113266598 113266952 -53383344 + RLTR10D LTR ERVK 1 359 0 4 1449 11721 115 14 17 chrX 113266954 113268308 -53381988 + L1_Mur1 LINE L1 2161 3505 -2381 4 1449 2906 75 16 28 chrX 113268308 113268734 -53381562 + BGLII LTR ERVK 1 421 0 4 1449 11721 115 14 17 chrX 113268734 113269289 -53381007 + L1_Mur1 LINE L1 3506 4064 -1822 4 1449 254 339 0 0 chrX 113269342 113269401 -53380895 + RSINE1 SINE B4 7 65 -100 4 1449 21 36 0 0 chrX 113269612 113269640 -53380656 + AT_rich Low_complexity Low_complexity 1 28 0 4 1449 809 201 138 4 chrX 113269647 113269872 -53380424 - L1_Mur3 LINE L1 -2185 3695 3441 4 1449 11837 163 18 15 chrX 113269860 113272022 -53378274 + L1_Mm LINE L1 3673 5840 -43 4 1449 409 253 0 0 chrX 113272033 113272128 -53378168 + Lx8 LINE L1 6761 6855 -618 4 1449 267 54 0 0 chrX 113272129 113272166 -53378130 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 4 1449 394 174 14 0 chrX 113272185 113272254 -53378042 + Lx8 LINE L1 6883 6952 -521 4 1449 345 47 0 0 chrX 113273436 113273479 -53376817 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1449 207 0 0 0 chrX 113273479 113273501 -53376795 + (CG)n Simple_repeat Simple_repeat 2 24 0 4 1449 2645 143 2 7 chrX 113273759 113274197 -53376099 + Lx LINE L1 6219 6654 0 4 1449 513 0 0 0 chrX 113274221 113274278 -53376018 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 1449 573 150 0 0 chrX 113274906 113275006 -53375290 + (TA)n Simple_repeat Simple_repeat 2 101 0 4 1449 226 143 0 0 chrX 113275033 113275082 -53375214 + Lx9 LINE L1 7478 7526 -118 4 1449 340 336 56 56 chrX 113275282 113275443 -53374853 + B3A SINE B2 34 194 -4 4 1449 388 268 16 16 chrX 113275792 113275917 -53374379 + MLT2B4 LTR ERVL 1 125 -431 4 1449 2031 210 23 83 chrX 113275938 113276467 -53373829 - Lx2B LINE L1 -3 6997 6501 4 1449 1260 234 44 16 chrX 113277048 113277413 -53372883 - Lx3C LINE L1 -544 6432 6058 4 1449 235 295 118 108 chrX 113277423 113277609 -53372687 + MLT2B4 LTR ERVL 173 360 -196 4 1449 849 45 9 0 chrX 113277967 113278078 -53372218 + B1_Mus1 SINE Alu 35 146 -2 4 1449 335 102 45 0 chrX 113278079 113278167 -53372129 + (CAAAAA)n Simple_repeat Simple_repeat 5 96 0 4 1449 5112 42 5 9 chrX 113278237 113278878 -53371418 + L1Md_F3 LINE L1 5947 6584 0 4 1449 300 27 0 0 chrX 113278944 113278981 -53371315 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 4 1449 1542 217 116 18 chrX 113279041 113279215 -53371081 - MTC LTR MaLR -3 418 209 4 1449 1118 113 0 11 chrX 113279215 113279394 -53370902 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 4 1449 855 157 24 6 chrX 113279394 113279561 -53370735 - Lx LINE L1 -12 6642 6473 4 1449 1542 217 116 18 chrX 113279561 113279766 -53370530 - MTC LTR MaLR -213 208 2 4 1449 236 194 119 30 chrX 113279824 113279925 -53370371 + MER115 DNA Tip100 574 683 -10 4 1449 234 125 0 0 chrX 113280235 113280283 -53370013 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1449 774 60 0 0 chrX 113281111 113281211 -53369085 + (TA)n Simple_repeat Simple_repeat 1 100 0 4 1449 243 0 0 0 chrX 113281281 113281308 -53368988 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1449 2164 110 28 44 chrX 113281593 113281955 -53368341 + Lx2 LINE L1 6641 6996 -1 4 1449 564 170 0 0 chrX 113282354 113282460 -53367836 + A-rich Low_complexity Low_complexity 3 108 0 4 1449 1278 40 0 28 chrX 113282463 113282643 -53367653 + (GAAAA)n Simple_repeat Simple_repeat 4 178 0 4 1449 877 9 18 0 chrX 113283236 113283346 -53366950 + (TCTA)n Simple_repeat Simple_repeat 3 114 0 4 1449 6237 74 8 1 chrX 113283496 113284299 -53365997 - RLTR13C2 LTR ERVK 0 808 1 4 1449 3094 143 2 0 chrX 113284513 113284994 -53365302 - L1_Mus3 LINE L1 -143 5740 5259 4 1449 5517 113 14 31 chrX 113284994 113285897 -53364399 + L1_Mus3 LINE L1 5751 6638 0 4 1449 28 29 0 0 chrX 113286665 113286700 -53363596 + AT_rich Low_complexity Low_complexity 1 35 0 4 1449 450 0 0 0 chrX 113286706 113286756 -53363540 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1449 28 0 0 0 chrX 113287024 113287052 -53363244 + AT_rich Low_complexity Low_complexity 1 28 0 4 1449 556 303 7 50 chrX 113287881 113288020 -53362276 + RSINE1 SINE B4 8 140 -25 4 1449 387 60 0 0 chrX 113288022 113288072 -53362224 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 1449 316 188 14 68 chrX 113288225 113288294 -53362002 - RMER5 LTR ERV1 0 534 470 4 1449 1954 200 97 35 chrX 113288294 113288787 -53361509 + RLTR11A LTR ERVK 3 526 -2 4 1449 1172 240 8 8 chrX 113288809 113289065 -53361231 - RMER5 LTR ERV1 -112 422 167 4 1449 1213 192 9 9 chrX 113289061 113289282 -53361014 - RMER5 LTR ERV1 -313 221 1 4 1449 195 24 22 87 chrX 113289382 113289428 -53360868 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1449 22 35 0 0 chrX 113289603 113289632 -53360664 + AT_rich Low_complexity Low_complexity 1 29 0 4 1449 698 295 28 14 chrX 113289949 113290162 -53360134 + B3 SINE B2 1 216 0 4 1449 246 307 22 33 chrX 113290167 113290258 -53360038 - Lx9 LINE L1 -1206 6438 6349 4 1449 279 0 0 0 chrX 113290312 113290343 -53359953 + (T)n Simple_repeat Simple_repeat 1 31 0 4 1449 1049 249 62 43 chrX 113290345 113290768 -53359528 - L1_Rod LINE L1 -2816 3031 2601 4 1449 324 48 0 0 chrX 113290769 113290811 -53359485 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1449 759 184 72 7 chrX 113291289 113291442 -53358854 + MTC LTR MaLR 228 390 -31 4 1449 1094 189 56 9 chrX 113291442 113291656 -53358640 - MTC LTR MaLR -197 224 1 4 1449 405 54 0 0 chrX 113292037 113292093 -53358203 + (T)n Simple_repeat Simple_repeat 1 56 0 4 1449 1615 311 78 40 chrX 113292212 113293804 -53356492 - L1M4b LINE L1 -2055 4948 3297 4 1449 319 243 118 53 chrX 113293847 113293999 -53356297 - L1M4b LINE L1 -6501 833 672 4 1449 1620 189 72 14 chrX 113294495 113294855 -53355441 - ORR1C2 LTR MaLR -3 381 1 4 1449 310 257 94 18 chrX 113294935 113295105 -53355191 - Lx7 LINE L1 -5 7691 7509 4 1449 738 297 28 14 chrX 113295120 113295394 -53354902 - Lx5 LINE L1 -207 6843 6643 4 1449 310 301 55 65 chrX 113295388 113295605 -53354691 + Lx6 LINE L1 7246 7460 0 4 1449 272 73 43 29 chrX 113295714 113295784 -53354512 + (TTTTTG)n Simple_repeat Simple_repeat 2 72 0 5 1449 3142 121 6 11 chrX 113295789 113296266 -53354030 - Lx LINE L1 -403 6251 5777 5 1449 2007 120 23 7 chrX 113296273 113296583 -53353713 + Lx LINE L1 6258 6572 -82 5 1449 600 229 68 13 chrX 113296583 113296743 -53353553 - RLTR13D5 LTR ERVK 0 1023 868 5 1449 7652 76 2 4 chrX 113296759 113297817 -53352479 - L1_Mus1 LINE L1 -1 6566 5510 5 1449 3705 177 1 6 chrX 113297830 113298529 -53351767 + L1_Mm LINE L1 4651 5346 -537 5 1449 1474 217 24 19 chrX 113298657 113299033 -53351263 + L1_Mur3 LINE L1 4891 5268 -612 5 1449 535 292 22 102 chrX 113299064 113299509 -53350787 + L1VL1 LINE L1 57 392 -6030 5 1449 406 236 80 37 chrX 113299567 113299730 -53350566 + L1_Mus1 LINE L1 675 844 -5772 5 1449 1079 199 13 0 chrX 113299700 113299931 -53350365 + L1_Mus1 LINE L1 725 958 -5658 5 1449 763 145 0 0 chrX 113299945 113300069 -53350227 + L1VL1 LINE L1 28 151 -6271 5 1449 26810 98 39 32 chrX 113300051 113304945 -53345351 + L1_Mus1 LINE L1 936 5355 -531 5 1449 2855 77 5 5 chrX 113304945 113305336 -53344960 + L1Md_F2 LINE L1 6180 6570 -12 5 1449 19949 118 6 33 chrX 113305336 113306659 -53343637 + L1_Mus1 LINE L1 5356 6564 -3 5 1449 3338 232 45 56 chrX 113306666 113308070 -53342226 + Lx6 LINE L1 5237 6629 -831 5 1449 1802 184 38 51 chrX 113308079 113308451 -53341845 - ORR1B2 LTR MaLR 0 367 1 5 1449 5646 216 56 19 chrX 113308451 113309905 -53340391 - ORR1B2-int LTR MaLR 0 1509 1 5 1449 1758 194 31 0 chrX 113309905 113310261 -53340035 - ORR1B2 LTR MaLR 0 367 1 5 1449 2510 283 18 53 chrX 113310270 113310388 -53339908 + Lx6 LINE L1 6668 6781 -679 5 1449 405 0 0 0 chrX 113310388 113310433 -53339863 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 5 1449 900 139 15 0 chrX 113310435 113310572 -53339724 - B1_Mus1 SINE Alu -6 142 4 5 1449 2510 283 18 53 chrX 113310572 113311272 -53339024 + Lx6 LINE L1 6782 7460 0 5 1449 16980 136 31 9 chrX 113312150 113315911 -53334385 - L1Md_F LINE L1 -1854 4029 184 5 1449 337 387 9 0 chrX 113316249 113316360 -53333936 + PB1D7 SINE Alu 1 112 -8 5 1449 577 237 97 50 chrX 113316365 113316607 -53333689 - Lx7 LINE L1 -72 7624 7371 5 1449 507 33 0 0 chrX 113316607 113316668 -53333628 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 1449 577 237 97 50 chrX 113316668 113316683 -53333613 - Lx7 LINE L1 -326 7370 7356 5 1449 183 80 0 0 chrX 113317505 113317530 -53332766 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 1449 443 380 55 1 chrX 113317632 113317851 -53332445 + MLT1A0 LTR MaLR 166 408 0 5 1449 37819 22 5 8 chrX 113317960 113324170 -53326126 + L1Md_A LINE L1 1 5586 -297 5 1449 8658 19 0 1 chrX 113324170 113325167 -53325129 + L1Md_A LINE L1 5587 6582 0 5 1449 5365 118 25 2 chrX 113325412 113326235 -53324061 - Lx3_Mus LINE L1 0 7009 6168 5 1449 1120 272 108 25 chrX 113326384 113326791 -53323505 + BGLII_B LTR ERVK 1 441 0 5 1449 700 245 30 54 chrX 113327533 113327736 -53322560 + B3A SINE B2 1 198 0 5 1449 26 50 0 0 chrX 113327736 113327776 -53322520 + AT_rich Low_complexity Low_complexity 1 40 0 5 1449 870 275 43 0 chrX 113327928 113328161 -53322135 + MTD LTR MaLR 177 419 0 5 1449 718 307 26 10 chrX 113328220 113328414 -53321882 + B3A SINE B2 2 198 0 5 1449 529 88 98 0 chrX 113328478 113328580 -53321716 - L1_Mus4 LINE L1 -4 6632 6521 5 1449 33 0 0 0 chrX 113328589 113328622 -53321674 + AT_rich Low_complexity Low_complexity 1 33 0 5 1449 661 297 19 9 chrX 113329246 113329460 -53320836 - B3 SINE B2 0 216 1 5 1449 717 360 3 29 chrX 113329520 113329900 -53320396 - HERVL74-int LTR ERVL -2523 3162 2793 5 1449 23 0 0 0 chrX 113330294 113330317 -53319979 + AT_rich Low_complexity Low_complexity 1 23 0 5 1449 551 350 48 45 chrX 113330319 113331012 -53319284 - HERVL74-int LTR ERVL -3435 2250 1556 5 1449 586 323 103 32 chrX 113332033 113332750 -53317546 + L1_Mur3 LINE L1 4851 5618 -262 5 1449 227 256 48 12 chrX 113332757 113332840 -53317456 + (TATATG)n Simple_repeat Simple_repeat 3 88 0 5 1449 306 106 0 0 chrX 113332840 113332887 -53317409 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1449 1248 326 46 19 chrX 113332928 113333498 -53316798 + Lx8 LINE L1 6264 6848 -625 5 1449 6674 113 44 6 chrX 113333498 113334645 -53315651 + L1_Mus4 LINE L1 5442 6631 -5 5 1449 731 334 48 10 chrX 113334713 113335003 -53315293 + Lx8 LINE L1 6842 7142 -331 5 1449 6236 54 1 4 chrX 113335183 113335976 -53314320 + L1Md_F3 LINE L1 5780 6570 -14 5 1449 26 0 0 0 chrX 113336387 113336413 -53313883 + AT_rich Low_complexity Low_complexity 1 26 0 5 1449 205 261 0 0 chrX 113337113 113337178 -53313118 + A-rich Low_complexity Low_complexity 1 65 0 5 1449 1640 269 54 19 chrX 113338132 113338727 -53311569 - Lx6 LINE L1 -26 7434 6454 5 1449 38030 13 1 7 chrX 113338728 113343996 -53306300 + L1Md_A LINE L1 356 5586 -297 5 1449 8635 21 0 0 chrX 113343996 113344991 -53305305 + L1Md_A LINE L1 5587 6581 -1 5 1449 22 35 0 0 chrX 113344991 113345020 -53305276 + AT_rich Low_complexity Low_complexity 1 29 0 5 1449 631 266 22 0 chrX 113345041 113345180 -53305116 - B1_Mur2 SINE Alu 0 149 8 5 1449 1373 58 63 0 chrX 113345368 113345558 -53304738 - L1Md_F3 LINE L1 -14 6570 6369 5 1449 22 70 0 0 chrX 113345567 113345610 -53304686 + AT_rich Low_complexity Low_complexity 1 43 0 5 1449 1070 89 7 0 chrX 113345715 113345861 -53304435 - B1_Mus1 SINE Alu 0 148 2 5 1449 2030 134 0 0 chrX 113346308 113346613 -53303683 - Lx2 LINE L1 0 6997 6693 5 1449 840 63 0 0 chrX 113347053 113347164 -53303132 + (GA)n Simple_repeat Simple_repeat 2 112 0 5 1449 4623 112 46 67 chrX 113347274 113347865 -53302431 + RLTR13D4 LTR ERVK 1 626 -407 5 1449 1221 78 0 16 chrX 113347865 113348047 -53302249 + L1Md_F2 LINE L1 6404 6582 0 5 1449 4623 112 46 67 chrX 113348047 113348252 -53302044 + RLTR13D4 LTR ERVK 627 781 -252 5 1449 3683 73 12 6 chrX 113348252 113348747 -53301549 - L1Md_F2 LINE L1 0 6582 6085 5 1449 1400 219 122 105 chrX 113348747 113348951 -53301345 + RLTR13D4 LTR ERVK 573 840 -193 5 1449 2563 82 144 134 chrX 113348951 113349458 -53300838 - RLTR1B LTR ERV1 0 512 1 5 1449 1400 163 30 37 chrX 113349458 113349652 -53300644 + RLTR13D4 LTR ERVK 841 1033 0 5 1449 1117 69 7 0 chrX 113349975 113350120 -53300176 + B1_Mus2 SINE Alu 2 147 0 5 1449 186 118 0 0 chrX 113350186 113350220 -53300076 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 5 1449 189 0 0 0 chrX 113350222 113350243 -53300053 + (CCCTAA)n Simple_repeat Simple_repeat 5 25 0 5 1449 486 304 111 0 chrX 113350372 113350507 -53299789 + B3A SINE B2 1 150 -48 5 1449 291 140 0 0 chrX 113350525 113350575 -53299721 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1449 391 311 140 19 chrX 113350945 113351260 -53299036 + L1MEc LINE L1 1077 1429 -4971 5 1449 246 62 0 0 chrX 113354625 113354657 -53295639 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 5 1449 353 246 9 0 chrX 113354746 113354856 -53295440 + Lx9 LINE L1 7524 7634 -10 5 1449 26 30 0 0 chrX 113354858 113354891 -53295405 + AT_rich Low_complexity Low_complexity 1 33 0 5 1449 661 338 45 9 chrX 113355043 113355267 -53295029 - ORR1D2 LTR MaLR -15 355 124 5 1449 570 116 23 0 chrX 113355678 113355807 -53294489 + (TC)n Simple_repeat Simple_repeat 1 132 0 5 1449 189 0 0 0 chrX 113355814 113355835 -53294461 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 1449 801 240 24 38 chrX 113355835 113356039 -53294257 + ORR1D1 LTR MaLR 173 374 0 5 1449 281 394 64 32 chrX 113356095 113356378 -53293918 - MTEa LTR MaLR 0 379 88 5 1449 746 334 148 12 chrX 113356837 113357419 -53292877 + MLT1-int LTR MaLR 4 664 -707 5 1449 36373 68 2 2 chrX 113357663 113363752 -53286544 - L1Md_F3 LINE L1 -14 6570 523 5 1449 690 178 0 25 chrX 113363845 113364006 -53286290 + C-rich Low_complexity Low_complexity 2 158 0 5 1449 379 236 0 16 chrX 113364027 113364057 -53286239 + polypyrimidine Low_complexity Low_complexity 101 130 0 5 1449 1144 101 11 0 chrX 113364057 113364235 -53286061 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 5 1449 379 236 0 16 chrX 113364235 113364261 -53286035 + polypyrimidine Low_complexity Low_complexity 75 100 0 5 1449 1114 98 6 11 chrX 113364261 113364437 -53285859 + (TTTCC)n Simple_repeat Simple_repeat 2 176 0 5 1449 379 236 0 16 chrX 113364437 113364508 -53285788 + polypyrimidine Low_complexity Low_complexity 5 74 0 5 1449 329 355 19 25 chrX 113364524 113364686 -53285610 + MLT1-int LTR MaLR 1063 1223 -148 5 1449 287 287 82 57 chrX 113364978 113365100 -53285196 - RMER20A LTR ERVK -391 125 1 5 1449 228 370 32 32 chrX 113365211 113365306 -53284990 + PB1D10 SINE Alu 3 97 -20 5 1449 327 25 0 0 chrX 113365459 113365499 -53284797 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 5 1449 490 252 13 118 chrX 113365499 113365652 -53284644 - B1_Mus2 SINE Alu -10 137 1 5 1449 1352 179 119 18 chrX 113365867 113366152 -53284144 - ORR1A2 LTR MaLR -13 314 1 5 1449 356 315 64 16 chrX 113366718 113366905 -53283391 + Tigger14a DNA MER2_type 129 324 0 5 1449 21 71 0 0 chrX 113367272 113367314 -53282982 + AT_rich Low_complexity Low_complexity 1 42 0 5 1449 26 0 0 0 chrX 113368213 113368239 -53282057 + AT_rich Low_complexity Low_complexity 1 26 0 5 1449 509 329 23 61 chrX 113368542 113368776 -53281520 + L1MB5 LINE L1 5743 5968 -206 5 1449 261 75 0 0 chrX 113368776 113368816 -53281480 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 5 1449 509 353 36 56 chrX 113368816 113368959 -53281337 + L1MB5 LINE L1 5969 6108 -66 5 1449 23 54 0 0 chrX 113369105 113369142 -53281154 + AT_rich Low_complexity Low_complexity 1 37 0 5 1449 259 274 158 9 chrX 113369142 113369256 -53281040 - MIR SINE MIR 0 262 132 5 1449 984 275 55 132 chrX 113369583 113369773 -53280523 - ORR1D2 LTR MaLR -34 336 147 5 1449 761 208 26 37 chrX 113369773 113369963 -53280333 - B2_Mm2 SINE B2 -7 188 1 5 1449 984 275 55 132 chrX 113369963 113370136 -53280160 - ORR1D2 LTR MaLR -224 146 1 5 1449 27 62 0 0 chrX 113370454 113370502 -53279794 + AT_rich Low_complexity Low_complexity 1 48 0 5 1449 21 36 0 0 chrX 113370736 113370764 -53279532 + AT_rich Low_complexity Low_complexity 1 28 0 5 1449 2776 117 0 9 chrX 113373166 113373589 -53276707 - L1_Mus4 LINE L1 0 6636 6218 5 1449 4759 124 25 0 chrX 113373596 113374736 -53275560 + L1_Mus4 LINE L1 5043 6203 -433 5 1449 385 291 21 16 chrX 113376736 113376928 -53273368 + L1M3 LINE L1 3271 3463 -2677 5 1449 248 280 30 0 chrX 113376946 113377046 -53273250 + L1M3 LINE L1 3528 3630 -2510 5 181 1855 202 8 17 chrX 113377102 113377464 -53272832 + ORR1B2 LTR MaLR 1 359 -8 5 1450 319 290 0 39 chrX 113377706 113377810 -53272486 + Lx9 LINE L1 7073 7172 -472 5 1450 2116 213 10 5 chrX 113377811 113378203 -53272093 + MTC LTR MaLR 2 395 -26 5 1450 1140 237 104 3 chrX 113378203 113378567 -53271729 + Lx9 LINE L1 7223 7623 -21 5 1450 2641 243 63 22 chrX 113378586 113379248 -53271048 - RMER1C Other Other -4 1338 287 5 1450 299 198 10 50 chrX 113379301 113379402 -53270894 + RCHARR1 DNA MER1_type 776 872 -102 5 1450 443 296 55 21 chrX 113379403 113379638 -53270658 - L1MA4 LINE L1 -383 5917 5675 5 1450 373 307 88 15 chrX 113379753 113380134 -53270162 - L1MA4 LINE L1 -790 5510 5097 5 1450 280 335 29 23 chrX 113381304 113381478 -53268818 - L1MA4 LINE L1 -1098 5045 4871 5 1450 371 313 21 21 chrX 113381663 113381947 -53268349 - L1MA4 LINE L1 -1382 4761 4478 5 1450 354 324 51 13 chrX 113382006 113382369 -53267927 - L1MA4 LINE L1 -1785 4358 3985 5 1450 773 233 5 0 chrX 113382743 113382932 -53267364 - L1_Mur2 LINE L1 -5985 727 538 6 1450 3241 184 28 53 chrX 113382987 113383670 -53266626 + Lx4B LINE L1 5657 6322 -736 6 1450 6203 71 16 5 chrX 113383679 113384537 -53265759 + RLTR13A3 LTR ERVK 111 978 0 6 1450 3637 189 25 4 chrX 113384538 113385264 -53265032 + Lx4B LINE L1 6318 7058 0 6 1450 1508 81 5 0 chrX 113385428 113385637 -53264659 + L1_Mus1 LINE L1 6357 6566 -1 6 1450 1139 218 72 66 chrX 113385816 113386121 -53264175 - ORR1A4 LTR MaLR -22 307 1 6 1450 268 340 119 52 chrX 113386327 113386578 -53263718 + MTE-int LTR MaLR 1261 1528 -52 6 1450 490 262 151 17 chrX 113387913 113388204 -53262092 + L1M2 LINE L1 3660 3989 -2154 6 1450 282 298 50 2 chrX 113388360 113388571 -53261725 + L1M2 LINE L1 4952 5181 -962 6 1450 4190 158 9 64 chrX 113388828 113389163 -53261133 + RMER19A LTR ERVK 1 341 -396 6 1450 2829 83 0 86 chrX 113389163 113389596 -53260700 + L1_Mus2 LINE L1 6171 6566 0 6 1450 4190 158 9 64 chrX 113389596 113389653 -53260643 + RMER19A LTR ERVK 342 361 -376 6 1450 294 0 21 42 chrX 113389653 113389701 -53260595 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 6 1450 4190 158 9 64 chrX 113389701 113390087 -53260209 + RMER19A LTR ERVK 362 737 0 6 1450 1616 319 71 25 chrX 113390088 113391098 -53259198 + Lx7 LINE L1 6285 7369 -327 6 1450 25 31 0 0 chrX 113391103 113391135 -53259161 + AT_rich Low_complexity Low_complexity 1 32 0 6 1450 650 262 45 23 chrX 113391255 113391531 -53258765 + L1M2 LINE L1 5511 5793 -498 6 1450 212 167 0 0 chrX 113392395 113392437 -53257859 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1450 22 70 0 0 chrX 113392958 113393001 -53257295 + AT_rich Low_complexity Low_complexity 1 43 0 6 1450 477 304 44 12 chrX 113393218 113393230 -53257066 + Lx7 LINE L1 7532 7542 -154 6 1450 423 0 0 0 chrX 113393230 113393277 -53257019 + (CATTT)n Simple_repeat Simple_repeat 3 49 0 6 1450 477 304 44 12 chrX 113393277 113393424 -53256872 + Lx7 LINE L1 7543 7696 0 6 1450 463 338 14 50 chrX 113393564 113393782 -53256514 + MTD LTR MaLR 3 212 -207 6 1450 6028 181 4 3 chrX 113393782 113394932 -53255364 - L1_Mur2 LINE L1 -194 5683 4532 6 1450 4183 150 12 6 chrX 113394934 113395624 -53254672 + Lx2 LINE L1 6303 6996 -1 6 1450 500 253 176 16 chrX 113395634 113395827 -53254469 + MTD LTR MaLR 196 419 0 6 1450 324 0 0 0 chrX 113396170 113396206 -53254090 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1450 628 261 55 13 chrX 113396925 113397162 -53253134 + L1M3 LINE L1 3659 3905 -2235 6 1450 270 301 30 7 chrX 113397168 113397396 -53252900 + L1M3 LINE L1 4922 5129 -751 6 1450 1101 113 0 0 chrX 113397464 113397632 -53252664 + (TTTCC)n Simple_repeat Simple_repeat 3 170 0 6 1450 475 193 0 45 chrX 113397660 113397764 -53252532 - B1_Mus2 SINE Alu -9 138 21 6 1450 229 239 64 21 chrX 113397803 113397897 -53252399 - L1M4 LINE L1 -748 5436 5339 6 1450 589 275 93 25 chrX 113398062 113398416 -53251880 - L1MA7 LINE L1 -121 6170 5793 6 1450 240 308 31 0 chrX 113398696 113398761 -53251535 - MTD LTR MaLR -233 146 80 6 1450 378 0 0 0 chrX 113398832 113398874 -53251422 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1450 261 286 67 0 chrX 113398876 113398995 -53251301 + Lx9 LINE L1 7513 7639 -5 6 1450 414 281 32 32 chrX 113399036 113399161 -53251135 - MTD LTR MaLR -294 125 1 6 1450 1428 300 123 23 chrX 113400075 113400717 -53249579 - Lx8 LINE L1 -194 7279 6574 6 1450 2299 33 0 0 chrX 113400718 113400988 -53249308 - LSU-rRNA_Hsa rRNA rRNA -1123 3912 3643 6 1450 225 259 85 12 chrX 113401018 113401100 -53249196 - Lx8 LINE L1 -906 6567 6480 6 1450 913 236 156 26 chrX 113401078 113401370 -53248926 + Lx9 LINE L1 6565 6894 -750 6 1450 1431 251 43 3 chrX 113401369 113401717 -53248579 + Lx9 LINE L1 7115 7476 -168 6 1450 367 236 129 8 chrX 113402072 113402196 -53248100 + Lx9 LINE L1 7495 7633 -11 6 1450 3241 56 5 0 chrX 113402182 113402595 -53247701 - L1_Mm LINE L1 -749 5134 4720 6 1450 1996 217 26 38 chrX 113404375 113404569 -53245727 + MTC LTR MaLR 5 198 -223 6 1450 3801 111 9 2 chrX 113404569 113405121 -53245175 + L1_Mus4 LINE L1 6081 6636 0 6 1450 1996 217 26 38 chrX 113405121 113405347 -53244949 + MTC LTR MaLR 199 420 -1 6 1450 194 323 67 79 chrX 113405526 113405704 -53244592 + L2a LINE L2 3198 3373 -53 6 1450 299 25 25 0 chrX 113405786 113405826 -53244470 + (TTG)n Simple_repeat Simple_repeat 2 42 0 6 1450 5855 118 37 2 chrX 113405921 113406808 -53243488 + Lx LINE L1 5736 6653 -1 6 1450 250 206 21 52 chrX 113406815 113406912 -53243384 - Lx9 LINE L1 -20 7624 7531 6 1450 614 282 162 11 chrX 113406921 113407199 -53243097 - ORR1D1 LTR MaLR -2 382 55 6 1450 535 240 0 0 chrX 113407195 113407295 -53243001 - ORR1D1-int LTR MaLR -1126 244 145 6 1450 504 295 0 0 chrX 113407313 113407442 -53242854 - Lx9 LINE L1 -460 7184 7056 6 1450 1988 211 35 5 chrX 113407447 113407842 -53242454 - MTC LTR MaLR -5 416 10 6 1450 1067 185 0 0 chrX 113407929 113408118 -53242178 + Lx6 LINE L1 6555 6743 -717 6 1450 437 181 12 12 chrX 113408118 113408202 -53242094 + RLTR17 LTR ERVK 1 84 -608 6 1450 1111 292 39 13 chrX 113408209 113408723 -53241573 - Lx6 LINE L1 -578 6882 6455 6 1450 268 337 0 0 chrX 113408742 113408831 -53241465 + Lx5 LINE L1 6189 6277 -773 6 1450 1852 285 74 20 chrX 113408863 113409059 -53241237 + ORR1D1-int LTR MaLR 223 432 -938 6 1450 423 0 0 0 chrX 113409059 113409106 -53241190 + (CAAAA)n Simple_repeat Simple_repeat 1 47 0 6 1450 1852 285 74 20 chrX 113409106 113409518 -53240778 + ORR1D1-int LTR MaLR 433 864 -506 6 1450 417 231 31 16 chrX 113409546 113409647 -53240649 + ORR1D1 LTR MaLR 284 420 -1 6 1450 857 42 0 55 chrX 113410527 113410641 -53239655 + B1_Mus1 SINE Alu 29 139 -9 6 1450 213 39 0 0 chrX 113410641 113410667 -53239629 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 1450 857 42 0 55 chrX 113410667 113410679 -53239617 + B1_Mus1 SINE Alu 140 148 0 6 1450 4314 104 2 8 chrX 113411054 113411682 -53238614 + L1_Mm LINE L1 4963 5586 -297 6 1450 8962 6 0 0 chrX 113411682 113412678 -53237618 + L1Md_T LINE L1 5587 6582 0 6 1450 7683 69 3 11 chrX 113412687 113413815 -53236481 + L1_Mus1 LINE L1 5447 6565 -2 6 1450 216 0 0 0 chrX 113413944 113413968 -53236328 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1450 24 0 0 0 chrX 113414462 113414486 -53235810 + AT_rich Low_complexity Low_complexity 1 24 0 6 1450 1817 294 89 23 chrX 113414489 113414616 -53235680 + Lx8 LINE L1 6351 6498 -975 6 1450 261 57 0 0 chrX 113414616 113414651 -53235645 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1450 1817 294 89 23 chrX 113414651 113415274 -53235022 + Lx8 LINE L1 6499 7150 -323 6 1450 22 0 0 0 chrX 113415297 113415319 -53234977 + AT_rich Low_complexity Low_complexity 1 22 0 6 1450 11677 46 12 3 chrX 113415371 113417543 -53232753 - L1Md_F2 LINE L1 0 6582 4386 6 1450 573 278 2 0 chrX 113418471 113418608 -53231688 - B1_Mur1 SINE Alu 0 149 11 6 1450 441 0 0 0 chrX 113418663 113418712 -53231584 + (GA)n Simple_repeat Simple_repeat 2 50 0 6 1450 365 345 58 8 chrX 113418713 113418833 -53231463 - RSINE1 SINE B4 -35 130 5 6 1450 201 108 0 0 chrX 113419826 113419863 -53230433 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1450 364 194 15 95 chrX 113420225 113420362 -53229934 - Lx9 LINE L1 -9 7635 7510 6 1450 958 152 0 6 chrX 113420677 113420849 -53229447 - Lx LINE L1 -2026 3860 3690 6 1450 10590 157 21 2 chrX 113420853 113423620 -53226676 + Lx LINE L1 3827 6654 0 6 1450 21 71 0 0 chrX 113423679 113423721 -53226575 + AT_rich Low_complexity Low_complexity 1 42 0 6 1450 407 18 36 0 chrX 113423922 113423977 -53226319 + (TTTTG)n Simple_repeat Simple_repeat 4 60 0 6 1450 318 268 71 20 chrX 113424003 113424102 -53226194 - RLTR25B LTR ERVK -484 544 441 6 1450 801 67 0 0 chrX 113424037 113424141 -53226155 - B1_Mus2 SINE Alu -43 104 1 6 1450 443 181 44 79 chrX 113424039 113424153 -53226143 - MT2B LTR ERVL -344 257 148 6 1450 21 0 0 0 chrX 113424255 113424276 -53226020 + AT_rich Low_complexity Low_complexity 1 21 0 6 1450 260 326 79 0 chrX 113424289 113424378 -53225918 - B3A SINE B2 -18 180 85 6 1450 7308 95 18 24 chrX 113424416 113425597 -53224699 + L1_Mus3 LINE L1 5464 6638 0 6 1450 481 221 183 10 chrX 113426864 113427061 -53223235 + Lx9 LINE L1 7388 7618 -26 6 1450 485 267 128 20 chrX 113427124 113427319 -53222977 + B3 SINE B2 1 216 0 6 1450 2841 125 17 39 chrX 113428616 113429075 -53221221 - Lx2 LINE L1 -6 6991 6543 6 1450 1750 135 17 0 chrX 113429076 113429365 -53220931 - Lx2 LINE L1 -731 6266 5973 6 1450 613 268 99 5 chrX 113429397 113429588 -53220708 - B3 SINE B2 -5 211 3 6 1450 383 299 141 35 chrX 113429588 113429899 -53220397 - L1M5 LINE L1 -2694 3452 3106 6 1450 464 352 131 30 chrX 113429914 113430442 -53219854 - L1M5 LINE L1 -3091 3055 2475 6 1450 426 316 83 100 chrX 113430913 113431196 -53219100 + MTE-int LTR MaLR 113 464 -907 6 1450 326 134 0 15 chrX 113431381 113431449 -53218847 + (TC)n Simple_repeat Simple_repeat 2 68 0 6 1450 8205 54 2 1 chrX 113431462 113433176 -53217120 - L1Md_F2 LINE L1 -12 6570 4854 6 1450 1363 263 93 13 chrX 113433356 113433581 -53216715 - RLTR40 LTR ERVK -2 815 581 6 1450 279 0 0 0 chrX 113433581 113433612 -53216684 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1450 1363 263 93 13 chrX 113433612 113433848 -53216448 - RLTR40 LTR ERVK -237 580 318 6 1450 4016 189 27 11 chrX 113433849 113434601 -53215695 - Lx2 LINE L1 -140 6857 6094 6 1450 1145 126 66 0 chrX 113434602 113434800 -53215496 + Lx2 LINE L1 5863 6073 -924 6 1450 885 200 37 116 chrX 113434807 113435101 -53215195 - RLTR40 LTR ERVK -546 271 1 6 1450 7248 96 0 8 chrX 113435540 113436956 -53213340 - L1_Mus2 LINE L1 -1 6565 5166 6 1450 240 250 15 0 chrX 113437418 113437486 -53212810 + Lx9 LINE L1 6876 6944 -700 6 1450 3265 176 32 120 chrX 113437490 113438305 -53211991 + RMER6A LTR ERVK 4 746 -10 6 1450 276 284 15 0 chrX 113438310 113438377 -53211919 + Lx9 LINE L1 6951 7018 -626 6 1450 548 319 29 0 chrX 113438528 113438738 -53211558 + Lx9 LINE L1 7254 7469 -175 6 1450 675 241 14 28 chrX 113438926 113439071 -53211225 + B1_Mur3 SINE Alu 7 149 0 6 1450 338 347 53 33 chrX 113439238 113439252 -53211044 + ID_B1 SINE B4 70 165 -59 6 1450 608 258 76 0 chrX 113439252 113439384 -53210912 + B1_Mur3 SINE Alu 2 143 -6 6 1450 28 29 0 0 chrX 113439398 113439433 -53210863 + AT_rich Low_complexity Low_complexity 1 35 0 6 1450 491 316 57 13 chrX 113439514 113439671 -53210625 + ID_B1 SINE B4 39 202 -22 6 1450 394 220 22 11 chrX 113439908 113440000 -53210296 + MTC LTR MaLR 1 93 -326 6 1450 12052 29 2 0 chrX 113440000 113441438 -53208858 + L1Md_T LINE L1 4146 5586 -297 6 1450 8330 38 0 0 chrX 113441438 113442434 -53207862 + L1Md_T LINE L1 5587 6582 0 6 1450 1180 284 24 29 chrX 113442438 113442779 -53207517 + MTC LTR MaLR 83 421 0 6 1450 322 78 0 0 chrX 113442916 113442967 -53207329 + Lx6 LINE L1 7390 7440 -20 6 1450 3882 45 0 0 chrX 113443024 113443494 -53206802 - L1Md_F2 LINE L1 -13 6569 6100 6 1450 3390 310 68 67 chrX 113446230 113447588 -53202708 + MTE2b-int LTR MaLR 178 1537 -43 6 1450 549 313 83 26 chrX 113447588 113447911 -53202385 + MTE2b LTR MaLR 1 379 0 6 1450 669 274 87 31 chrX 113447922 113448337 -53201959 - L1M2 LINE L1 -2061 4082 3645 6 1450 29 0 0 0 chrX 113448841 113448870 -53201426 + AT_rich Low_complexity Low_complexity 1 29 0 6 1450 681 47 0 0 chrX 113449012 113449097 -53201199 + (TTC)n Simple_repeat Simple_repeat 3 87 0 6 1450 339 25 0 0 chrX 113449097 113449137 -53201159 + (TC)n Simple_repeat Simple_repeat 2 41 0 6 1450 351 96 0 0 chrX 113449137 113449189 -53201107 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 1450 308 318 28 18 chrX 113449271 113449380 -53200916 - B1F SINE Alu -18 131 22 7 1450 426 274 232 0 chrX 113449654 113449822 -53200474 + B3 SINE B2 4 210 -6 7 1450 368 276 11 0 chrX 113450048 113450135 -53200161 + B3A SINE B2 3 90 -108 7 1450 828 306 16 19 chrX 113450157 113450414 -53199882 + MTE-int LTR MaLR 1026 1281 -299 7 1450 519 123 0 0 chrX 113450444 113450525 -53199771 + (TA)n Simple_repeat Simple_repeat 1 81 0 7 1450 221 180 0 62 chrX 113450851 113450873 -53199423 + polypyrimidine Low_complexity Low_complexity 41 62 0 7 1450 1061 133 0 11 chrX 113450873 113451055 -53199241 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 1450 221 180 0 62 chrX 113451055 113451090 -53199206 + polypyrimidine Low_complexity Low_complexity 8 40 0 7 1450 720 35 0 0 chrX 113451090 113451177 -53199119 + (TTCC)n Simple_repeat Simple_repeat 3 89 0 7 1450 320 377 68 19 chrX 113451561 113451723 -53198573 - HERVL74-int LTR ERVL -986 4699 4530 7 1450 297 0 0 0 chrX 113451950 113451983 -53198313 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1450 369 0 0 0 chrX 113452332 113452373 -53197923 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1450 261 367 28 28 chrX 113453007 113453189 -53197107 - HERVL74-int LTR ERVL -4022 1663 1482 7 1450 477 0 0 0 chrX 113453251 113453304 -53196992 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 1450 1504 214 132 26 chrX 113453304 113453956 -53196340 - RMER6C LTR ERVK -13 707 128 7 1450 415 244 84 32 chrX 113454077 113454324 -53195972 - L1MA9 LINE L1 -182 6130 5868 7 1450 2526 39 0 3 chrX 113454579 113454889 -53195407 - L1Md_T LINE L1 -1 6581 6273 7 1450 3780 30 0 0 chrX 113454889 113455330 -53194966 + L1Md_T LINE L1 5812 6252 -330 7 1450 563 335 55 0 chrX 113455585 113455785 -53194511 + B3 SINE B2 6 216 0 7 1450 3249 72 0 5 chrX 113456074 113456492 -53193804 - L1_Mus1 LINE L1 0 6567 6152 7 1450 210 37 0 0 chrX 113456829 113456856 -53193440 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 7 1450 483 240 0 0 chrX 113456899 113457024 -53193272 + (TA)n Simple_repeat Simple_repeat 2 126 0 7 1450 3270 53 2 0 chrX 113457495 113457890 -53192406 + MTA_Mm LTR MaLR 1 396 0 7 1450 225 0 0 0 chrX 113458237 113458262 -53192034 + (CTG)n Simple_repeat Simple_repeat 2 26 0 7 1450 218 32 0 31 chrX 113459207 113459239 -53191057 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1450 266 208 0 0 chrX 113459269 113459317 -53190979 + L1M3 LINE L1 4875 4922 -1221 7 1450 1082 132 0 0 chrX 113459345 113459504 -53190792 + U1 snRNA snRNA 6 164 -1 7 1450 565 271 73 22 chrX 113459534 113459809 -53190487 + L1M3 LINE L1 4973 5261 -879 7 1450 225 326 44 22 chrX 113460014 113460149 -53190147 - L1M2 LINE L1 -819 5324 5187 7 1450 604 257 143 46 chrX 113460161 113460357 -53189939 - B3 SINE B2 0 216 2 7 1450 4199 82 0 0 chrX 113460413 113460975 -53189321 - L1_Mus1 LINE L1 0 6567 6006 7 1450 235 127 16 16 chrX 113461219 113461283 -53189013 + T-rich Low_complexity Low_complexity 3 66 0 7 1450 301 202 77 96 chrX 113461312 113461416 -53188880 - L1M2 LINE L1 -1233 4910 4809 7 1450 371 315 137 59 chrX 113461808 113462064 -53188232 - RLTR26 LTR ERVK -225 417 142 7 1450 23 0 0 0 chrX 113462958 113462981 -53187315 + AT_rich Low_complexity Low_complexity 1 23 0 7 1450 363 360 88 54 chrX 113463152 113463196 -53187100 - MER74A LTR ERVL -27 531 490 7 1450 320 254 0 0 chrX 113463196 113463263 -53187033 + ID4 SINE ID 3 69 -14 7 1450 363 360 88 54 chrX 113463263 113463512 -53186784 - MER74A LTR ERVL -69 489 228 7 1450 227 208 19 0 chrX 113463821 113463874 -53186422 + T-rich Low_complexity Low_complexity 2 55 0 7 1450 328 364 45 14 chrX 113463980 113464200 -53186096 - L1MC LINE L1 -3274 2872 2646 7 1450 939 199 72 5 chrX 113464342 113464549 -53185747 + URR1A DNA MER1_type 2 222 -4 7 1450 639 331 54 104 chrX 113464633 113464913 -53185383 - B4 SINE B4 0 292 27 7 1450 4225 135 28 30 chrX 113465022 113466086 -53184210 + Lx3A LINE L1 5085 6167 -814 7 1450 1066 171 14 9 chrX 113466086 113466298 -53183998 + Lx3A LINE L1 6769 6981 0 7 1450 717 304 77 43 chrX 113466897 113467677 -53182619 - Lx7 LINE L1 -1668 5976 5143 7 1450 558 108 0 0 chrX 113468056 113468139 -53182157 + (TTCC)n Simple_repeat Simple_repeat 3 85 0 7 1450 1109 88 0 0 chrX 113468141 113468288 -53182008 - B1_Mus2 SINE Alu 0 147 1 7 1450 284 294 118 9 chrX 113468561 113468781 -53181515 + L1ME2z LINE L1 6199 6442 -2 7 1450 21 0 0 0 chrX 113469069 113469090 -53181206 + AT_rich Low_complexity Low_complexity 1 21 0 7 1450 1031 298 39 47 chrX 113469418 113469808 -53180488 - MTE2a LTR MaLR -24 395 1 7 1450 1087 331 27 21 chrX 113469981 113470355 -53179941 - MTEa LTR MaLR -3 376 1 7 1450 1590 327 41 31 chrX 113470358 113471522 -53178774 - MTEa-int LTR MaLR -3 1577 352 7 1450 603 40 0 0 chrX 113471523 113471597 -53178699 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 7 1450 1003 64 7 0 chrX 113471610 113471750 -53178546 - B1_Mm SINE Alu 0 147 7 7 1450 1587 67 0 0 chrX 113471773 113471982 -53178314 - L1Md_T LINE L1 -2 6580 6372 7 1450 532 293 0 0 chrX 113471984 113472107 -53178189 - MTEa-int LTR MaLR -1233 347 225 7 1450 714 282 21 43 chrX 113472444 113472677 -53177619 - MTEa-int LTR MaLR -1351 229 2 7 1450 265 188 0 0 chrX 113472688 113472733 -53177563 - MTEa LTR MaLR -12 367 323 7 1450 326 286 41 32 chrX 113472733 113472856 -53177440 + B2_Mm2 SINE B2 1 124 -71 7 1450 546 29 0 0 chrX 113472874 113472942 -53177354 + (CA)n Simple_repeat Simple_repeat 2 69 0 7 1450 527 137 60 75 chrX 113472946 113473080 -53177216 + Lx3B LINE L1 6801 6932 -41 7 1450 288 240 62 5 chrX 113473234 113473317 -53176979 - MTE2a LTR MaLR -290 89 8 7 1450 183 42 0 0 chrX 113473435 113473459 -53176837 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 7 1450 180 0 0 0 chrX 113473627 113473647 -53176649 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7 1450 930 300 30 85 chrX 113473678 113473976 -53176320 + Lx9 LINE L1 7170 7470 -174 7 1450 1174 41 7 0 chrX 113473976 113474122 -53176174 + B1_Mm SINE Alu 1 147 0 7 1450 930 300 30 85 chrX 113474122 113474318 -53175978 + Lx9 LINE L1 7471 7636 -8 7 1450 574 310 78 49 chrX 113474340 113474646 -53175650 - ORR1D2 LTR MaLR -31 339 1 7 1450 21 36 0 0 chrX 113475142 113475170 -53175126 + AT_rich Low_complexity Low_complexity 1 28 0 7 1450 1772 194 59 18 chrX 113475220 113475609 -53174687 + MTB_Mm LTR MaLR 3 407 0 7 1450 575 332 30 15 chrX 113476071 113476270 -53174026 + B3 SINE B2 15 216 0 7 1450 498 361 6 6 chrX 113476366 113476525 -53173771 - RSINE1 SINE B4 -2 163 5 7 1450 23 33 0 0 chrX 113476658 113476688 -53173608 + AT_rich Low_complexity Low_complexity 1 30 0 7 1450 198 0 0 0 chrX 113477207 113477229 -53173067 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 7 1450 26 30 0 0 chrX 113477433 113477466 -53172830 + AT_rich Low_complexity Low_complexity 1 33 0 7 1450 3312 182 73 7 chrX 113477513 113478132 -53172164 - Lx4A LINE L1 -4 7054 6395 7 1450 14178 158 66 11 chrX 113478107 113478873 -53171423 - L1_Mur2 LINE L1 -409 5468 4672 7 1450 180 0 0 0 chrX 113478873 113478893 -53171403 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 7 1450 14178 158 66 11 chrX 113478893 113480990 -53169306 - L1_Mur2 LINE L1 -1206 4671 2449 7 1450 3194 70 7 2 chrX 113481001 113481431 -53168865 - L1_Mus3 LINE L1 -7 6631 6200 7 1450 2966 145 42 150 chrX 113481429 113482249 -53168047 - L1_Mur2 LINE L1 -3414 2463 1733 7 1450 524 213 0 14 chrX 113483005 113483148 -53167148 + GA-rich Low_complexity Low_complexity 1 141 0 7 1450 8712 113 13 0 chrX 113483261 113485298 -53164998 - L1_Mus2 LINE L1 -5 6561 4492 7 1450 2360 168 28 69 chrX 113485327 113485916 -53164380 - L1_Mur2 LINE L1 -4213 1664 1038 7 1450 387 0 0 0 chrX 113485916 113485959 -53164337 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 1450 2360 216 56 35 chrX 113485959 113486407 -53163889 - L1_Mur2 LINE L1 -6049 1037 583 7 1450 24 32 0 0 chrX 113486410 113486441 -53163855 + AT_rich Low_complexity Low_complexity 1 31 0 7 1450 2915 215 45 101 chrX 113486674 113487518 -53162778 + RLTR40 LTR ERVK 1 797 -20 7 1450 290 373 80 73 chrX 113487643 113487910 -53162386 - B4A SINE B4 -16 276 4 7 1450 260 269 0 0 chrX 113487977 113488044 -53162252 + A-rich Low_complexity Low_complexity 4 70 0 7 1450 308 301 156 76 chrX 113488947 113488987 -53161309 - L1MC1 LINE L1 -257 6076 6031 7 1450 411 0 0 0 chrX 113488987 113489041 -53161255 + L1Md_T LINE L1 6528 6581 -1 7 1450 308 301 156 76 chrX 113489041 113489237 -53161059 - L1MC1 LINE L1 -303 6030 5821 7 1450 5362 39 0 0 chrX 113489366 113490006 -53160290 - L1Md_T LINE L1 0 6582 5943 7 1450 7146 11 1 0 chrX 113490008 113490859 -53159437 + L1Md_T LINE L1 5070 5921 -661 7 1450 270 324 17 44 chrX 113490814 113490995 -53159301 - L1MA9 LINE L1 -76 6236 6061 7 1450 1012 144 16 32 chrX 113490996 113491183 -53159113 + B2_Mm2 SINE B2 1 184 -11 7 1450 396 0 0 0 chrX 113491189 113491233 -53159063 + (GAAA)n Simple_repeat Simple_repeat 3 46 0 7 1450 21 71 0 0 chrX 113491671 113491713 -53158583 + AT_rich Low_complexity Low_complexity 1 42 0 7 1450 261 267 53 16 chrX 113491749 113491882 -53158414 + L1M5 LINE L1 3342 3480 -2663 7 1450 533 324 9 28 chrX 113491910 113492123 -53158173 + B3 SINE B2 6 214 -2 7 1450 498 200 83 23 chrX 113492413 113492546 -53157750 - Lx7 LINE L1 0 7696 7556 7 1450 3045 185 32 22 chrX 113492585 113492991 -53157305 + L1_Mus4 LINE L1 691 1091 -5566 7 1450 7028 115 37 21 chrX 113492991 113494114 -53156182 + Lx3_Mus LINE L1 5861 7001 -8 7 1450 23195 176 23 16 chrX 113494114 113494714 -53155582 + L1_Mus4 LINE L1 1092 1707 -4176 7 1450 486 0 0 0 chrX 113494714 113494768 -53155528 + (TA)n Simple_repeat Simple_repeat 2 55 0 7 1450 23195 175 21 15 chrX 113494768 113495109 -53155187 + L1_Mus4 LINE L1 1708 2072 -3811 7 1450 203 0 0 36 chrX 113495109 113495137 -53155159 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 7 1450 23195 175 21 15 chrX 113495137 113498729 -53151567 + L1_Mus4 LINE L1 2073 5676 -207 7 1450 432 0 0 0 chrX 113498729 113498777 -53151519 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 7 1450 3423 72 33 4 chrX 113498779 113499237 -53151059 - L1Md_F2 LINE L1 -14 6568 6098 7 1450 23195 111 9 57 chrX 113499237 113499916 -53150380 + L1_Mus4 LINE L1 5677 6352 -284 7 1450 271 116 0 0 chrX 113499923 113499966 -53150330 - L1_Mur2 LINE L1 -2322 3555 3513 7 1450 1678 38 14 0 chrX 113500000 113500201 -53150095 + L1Md_F2 LINE L1 6359 6562 -20 1 1450 503 43 14 0 chrX 113500201 113500271 -53150025 + (TA)n Simple_repeat Simple_repeat 1 71 0 2 1450 1275 156 7 88 chrX 113500274 113500569 -53149727 - MusHAL1 LINE L1 -377 2335 2065 3 1450 1012 114 0 25 chrX 113500569 113500604 -53149692 - B2_Mm1t SINE B2 -23 170 139 4 1450 5186 76 7 4 chrX 113500604 113501295 -53149001 - L1_Mus1 LINE L1 -1 6566 5874 5 1450 1012 114 0 25 chrX 113501295 113501421 -53148875 - B2_Mm1t SINE B2 -55 138 13 4 1450 7215 134 2 2 chrX 113501424 113502543 -53147753 - L1Md_F LINE L1 0 5883 4765 6 1450 9170 141 12 3 chrX 113502549 113504983 -53145313 - L1Md_F LINE L1 -3244 2639 184 6 1450 2389 217 301 18 chrX 113504984 113505747 -53144549 - L1_Mur1 LINE L1 -2610 3267 2198 7 1450 2964 60 27 17 chrX 113505747 113506154 -53144142 - L1_Mus1 LINE L1 -3 6564 6154 8 1450 2389 217 301 18 chrX 113506154 113506472 -53143824 - L1_Mur1 LINE L1 -3680 2197 1879 7 1450 286 285 25 105 chrX 113506990 113507190 -53143106 + MURVY-LTR LTR ERV1 273 456 -63 9 181 3347 194 39 16 chrX 113507216 113508362 -53141934 - L1_Mur1 LINE L1 -2035 1879 705 7 1451 240 311 0 22 chrX 113508772 113508864 -53141432 + L1MA7 LINE L1 5921 6010 -281 1 1451 229 290 0 14 chrX 113508870 113508940 -53141356 - MTEb LTR MaLR -2 377 309 1 1451 225 404 37 0 chrX 113509087 113509196 -53141100 - MTEb LTR MaLR -229 150 38 1 1451 372 358 92 9 chrX 113509870 113510087 -53140209 + L1M2 LINE L1 3614 3848 -2295 1 1451 464 214 211 3 chrX 113511107 113511234 -53139062 + B1_Mus2 SINE Alu 1 148 0 1 1451 387 0 0 0 chrX 113512843 113512886 -53137410 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1451 2624 251 108 29 chrX 113513245 113514139 -53136157 + L1_Mur3 LINE L1 310 1274 -6454 1 1451 321 28 0 0 chrX 113514139 113514175 -53136121 + L1Md_F3 LINE L1 5551 5586 -297 1 1451 8218 36 5 1 chrX 113514178 113515171 -53135125 + L1Md_F3 LINE L1 5587 6583 -1 1 1451 1541 168 57 3 chrX 113515403 113515581 -53134715 + L1_Mur3 LINE L1 1237 1426 -4454 1 1451 657 0 0 0 chrX 113515581 113515654 -53134642 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 1 1451 1541 168 57 3 chrX 113515654 113515864 -53134432 + L1_Mur3 LINE L1 1427 1646 -4234 1 1451 1174 247 92 0 chrX 113516270 113516472 -53133824 + Lx9 LINE L1 7217 7424 -220 1 1451 1863 205 19 5 chrX 113516472 113516845 -53133451 - ORR1C1 LTR MaLR 0 378 1 1 1451 1174 247 92 0 chrX 113516845 113516990 -53133306 + Lx9 LINE L1 7425 7595 -49 1 1451 23 33 0 0 chrX 113517005 113517035 -53133261 + AT_rich Low_complexity Low_complexity 1 30 0 2 1451 358 205 143 12 chrX 113517776 113517860 -53132436 + MTD LTR MaLR 18 112 -307 2 1451 1139 90 6 0 chrX 113517860 113518026 -53132270 + (TTCTC)n Simple_repeat Simple_repeat 5 171 0 2 1451 492 18 0 0 chrX 113518029 113518086 -53132210 + (TC)n Simple_repeat Simple_repeat 1 57 0 2 1451 484 270 0 0 chrX 113518087 113518198 -53132098 - PB1D9 SINE Alu -8 112 2 2 1451 723 309 127 4 chrX 113518199 113518452 -53131844 + MTD LTR MaLR 105 388 -31 2 1451 3561 55 2 17 chrX 113518455 113518991 -53131305 + IAPEz-int LTR ERVK 211 662 -5819 2 1451 1974 86 41 0 chrX 113518991 113519258 -53131038 + IAPEz-int LTR ERVK 1359 1636 -4845 2 1451 6092 47 3 7 chrX 113519257 113520006 -53130290 + IAPEz-int LTR ERVK 5736 6481 0 2 1451 1568 143 16 12 chrX 113520006 113520261 -53130035 + IAPLTR2a LTR ERVK 1 256 -155 2 1451 41054 7 1 6 chrX 113520261 113526631 -53123665 - L1Md_A LINE L1 -17 6565 232 2 1451 859 102 136 40 chrX 113526658 113526885 -53123411 + IAPLTR2a LTR ERVK 212 475 0 2 1451 1535 245 82 26 chrX 113526936 113527326 -53122970 - MTC LTR MaLR -9 412 1 2 1451 478 217 9 9 chrX 113527326 113527433 -53122863 - MTC-int LTR MaLR 0 1258 1152 2 1451 26 0 0 0 chrX 113527879 113527905 -53122391 + AT_rich Low_complexity Low_complexity 1 26 0 2 1451 180 97 0 0 chrX 113528308 113528339 -53121957 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1451 259 315 127 18 chrX 113528344 113528454 -53121842 - B1F1 SINE Alu -23 126 5 3 1451 227 326 43 33 chrX 113528374 113528466 -53121830 - MT2B2 LTR ERVL -335 249 157 3 1451 363 379 65 36 chrX 113528473 113528810 -53121486 + MER82 DNA MER2_type 290 636 -17 3 1451 618 296 70 79 chrX 113528971 113529414 -53120882 + L1MD LINE L1 2825 3263 -2883 3 1451 1458 109 0 5 chrX 113529425 113529636 -53120660 - L1_Mus2 LINE L1 -718 5165 4956 3 1451 7083 82 16 8 chrX 113529635 113530996 -53119300 + L1_Mus2 LINE L1 5192 6566 0 3 1451 33 0 0 0 chrX 113531506 113531539 -53118757 + AT_rich Low_complexity Low_complexity 1 33 0 3 1451 320 322 34 20 chrX 113531796 113531953 -53118343 + L1M4 LINE L1 3951 4109 -2037 3 1451 181 77 77 0 chrX 113532006 113532045 -53118251 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 3 1451 329 278 156 15 chrX 113532094 113532229 -53118067 - RMER15 LTR ERVL -68 507 354 3 1451 2003 196 26 3 chrX 113532231 113532609 -53117687 + ORR1B1 LTR MaLR 1 387 -7 3 1451 420 348 7 7 chrX 113532876 113533015 -53117281 + RMER15-int LTR ERVL 3925 4063 -936 4 1451 682 280 29 11 chrX 113533059 113533239 -53117057 + B3 SINE B2 1 192 -6 4 1451 652 306 62 43 chrX 113533316 113533572 -53116724 + RMER15-int LTR ERVL 4163 4423 -576 4 1451 535 313 63 40 chrX 113533777 113534000 -53116296 - RMER15-int LTR ERVL -1239 3760 3533 3 1451 801 310 116 7 chrX 113534317 113534619 -53115677 - RMER15-int LTR ERVL -4649 350 16 3 1451 281 349 53 0 chrX 113534630 113534782 -53115514 - RMER15 LTR ERVL 0 575 416 3 1451 533 340 103 30 chrX 113534961 113535398 -53114898 + L1MD LINE L1 4183 4651 -1495 4 1451 559 265 130 0 chrX 113535436 113535621 -53114675 - MTD LTR MaLR -8 411 203 4 1451 498 271 33 56 chrX 113535734 113535914 -53114382 - MTD LTR MaLR -243 176 1 4 1451 781 280 35 66 chrX 113535914 113536201 -53114095 + Lx9 LINE L1 6489 6766 -878 4 1451 1676 240 87 3 chrX 113536254 113536646 -53113650 - MT2A LTR ERVL -108 425 1 4 1451 766 335 23 34 chrX 113536652 113537038 -53113258 + Lx9 LINE L1 6769 7150 -494 4 1451 1028 267 76 77 chrX 113537083 113538042 -53112254 + Lx6 LINE L1 478 1380 -4500 4 1451 6658 216 35 15 chrX 113538039 113539827 -53110469 + Lx6 LINE L1 4319 6134 -1326 4 1451 476 281 104 0 chrX 113539832 113539967 -53110329 - B3 SINE B2 -64 152 4 4 1451 655 308 49 61 chrX 113539996 113540487 -53109809 + Lx8 LINE L1 5687 6171 -1302 4 1451 1702 347 77 21 chrX 113540489 113541573 -53108723 + Lx8 LINE L1 6301 7444 -29 4 1451 2380 157 197 15 chrX 113541909 113542493 -53107803 - RMER6C LTR ERVK 0 690 1 4 1451 536 287 52 26 chrX 113542955 113543148 -53107148 - B3A SINE B2 0 198 1 5 1451 7631 68 2 6 chrX 113543172 113544268 -53106028 - L1Md_F2 LINE L1 -19 6563 5466 5 1451 474 88 0 0 chrX 113544591 113544659 -53105637 + (TC)n Simple_repeat Simple_repeat 1 68 0 5 1451 44 35 0 0 chrX 113544661 113544719 -53105577 + AT_rich Low_complexity Low_complexity 1 58 0 5 1451 4185 74 7 5 chrX 113544719 113545278 -53105018 - L1Md_F2 LINE L1 -3 6579 6020 5 1451 8834 124 10 26 chrX 113545280 113546813 -53103483 - Lx3_Mus LINE L1 -49 6960 5449 5 1451 4388 90 8 0 chrX 113546812 113547443 -53102853 + L1_Mur1 LINE L1 4094 4729 -1157 5 1451 422 207 8 33 chrX 113548605 113548725 -53101571 - L1Md_F3 LINE L1 0 6584 6468 5 1451 1627 131 0 44 chrX 113549078 113549350 -53100946 + RLTR26 LTR ERVK 1 260 -382 5 1451 198 0 0 0 chrX 113549378 113549400 -53100896 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 5 1451 29 28 0 0 chrX 113549813 113549849 -53100447 + AT_rich Low_complexity Low_complexity 1 36 0 6 1451 312 140 17 17 chrX 113550280 113550338 -53099958 - MTEb LTR MaLR -4 375 318 6 1451 350 110 27 0 chrX 113551330 113551403 -53098893 + (CAGA)n Simple_repeat Simple_repeat 2 76 0 6 1451 500 322 36 47 chrX 113551635 113551827 -53098469 - B3A SINE B2 0 198 9 6 1451 793 321 103 35 chrX 113551961 113552280 -53098016 + MTE2a LTR MaLR 39 379 0 6 1451 604 381 78 13 chrX 113552904 113553276 -53097020 + MTE-int LTR MaLR 1 396 -1184 6 1451 945 362 71 33 chrX 113553602 113554267 -53096029 + MTE-int LTR MaLR 808 1497 -83 6 1451 372 51 0 0 chrX 113554421 113554480 -53095816 - L1_Mus3 LINE L1 -1 6637 6579 6 1451 1301 264 87 22 chrX 113554771 113555166 -53095130 - MTD LTR MaLR -37 382 6 6 1451 3137 277 94 51 chrX 113555171 113556378 -53093918 - MTD-int LTR MaLR 0 1258 1 6 1451 1188 241 135 36 chrX 113556378 113556740 -53093556 - MTD LTR MaLR 0 419 22 6 1451 572 347 61 17 chrX 113556753 113557046 -53093250 + Lx8 LINE L1 6894 7199 -274 6 1451 239 301 73 6 chrX 113557308 113557485 -53092811 + L1M2 LINE L1 3091 3279 -2864 6 1451 496 209 28 104 chrX 113557862 113557933 -53092363 - ORR1C1 LTR MaLR 0 378 318 7 1451 5477 136 45 12 chrX 113557933 113558855 -53091441 - Lx2 LINE L1 -3 6994 6043 7 1451 496 225 53 106 chrX 113558855 113558997 -53091299 - ORR1C1 LTR MaLR -61 323 177 7 1451 299 318 217 41 chrX 113559016 113559468 -53090828 + L1M2 LINE L1 4840 5371 -769 6 1451 1065 280 89 52 chrX 113560481 113560862 -53089434 + MTD LTR MaLR 5 399 -20 7 1451 829 253 89 12 chrX 113561094 113561342 -53088954 + Lx6 LINE L1 7051 7317 -143 7 1451 286 223 133 48 chrX 113561345 113561423 -53088873 + Lx7 LINE L1 7476 7560 -136 7 1451 727 129 17 8 chrX 113561423 113561540 -53088756 - PB1D9 SINE Alu -1 119 2 7 1451 286 223 133 48 chrX 113561540 113561626 -53088670 + Lx7 LINE L1 7561 7654 -42 7 1451 210 37 0 0 chrX 113562005 113562032 -53088264 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 1451 258 387 0 0 chrX 113562032 113562107 -53088189 - B4A SINE B4 -12 280 206 7 1451 284 341 77 38 chrX 113563944 113564127 -53086169 + FordPrefect_a DNA Tip100 316 505 -3 7 1451 741 23 0 0 chrX 113564279 113564366 -53085930 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 7 1451 1811 87 8 0 chrX 113564373 113564627 -53085669 - L1_Mus2 LINE L1 -1 6565 6310 8 1451 265 268 56 0 chrX 113564631 113564702 -53085594 - MER115 DNA Tip100 -101 592 518 8 1451 1258 136 58 14 chrX 113564735 113564958 -53085338 + L1Md_F2 LINE L1 6348 6580 -2 8 1451 421 179 0 0 chrX 113565014 113565092 -53085204 - RLTR12B LTR ERVK -183 345 268 8 1451 262 61 0 39 chrX 113565316 113565367 -53084929 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 8 1451 841 302 87 28 chrX 113565444 113565919 -53084377 - L1MA6 LINE L1 -49 6254 5736 8 1451 578 85 0 11 chrX 113565919 113566014 -53084282 + L1Md_F2 LINE L1 6478 6571 -11 8 1451 593 301 102 26 chrX 113566014 113566616 -53083680 - L1MA6 LINE L1 -568 5735 5084 8 1451 308 302 32 70 chrX 113566717 113566902 -53083394 - L1M4 LINE L1 -615 5559 5382 8 1451 644 273 11 38 chrX 113566906 113567089 -53083207 + Lx6 LINE L1 7268 7445 -15 8 1451 1014 33 0 0 chrX 113567091 113567213 -53083083 + (GAA)n Simple_repeat Simple_repeat 2 123 0 8 1451 320 325 54 39 chrX 113567245 113567450 -53082846 - L1_Rod LINE L1 -131 5716 5509 9 1451 16693 107 44 29 chrX 113567450 113571692 -53078604 - L1Md_F2 LINE L1 -1 6581 2636 9 1451 252 292 22 11 chrX 113571697 113571787 -53078509 - MERVL_2A-int LTR ERVL -4402 1359 1269 9 1451 392 308 31 37 chrX 113572668 113572830 -53077466 - MERVL_2A-int LTR ERVL -4685 1076 916 9 1451 4260 58 5 32 chrX 113573036 113573145 -53077151 - L1_Mus1 LINE L1 -409 6158 6062 9 1451 2026 77 7 32 chrX 113573145 113573454 -53076842 - L1Md_F2 LINE L1 0 6582 6282 9 1451 4410 82 6 19 chrX 113573454 113574280 -53076016 - L1_Mus1 LINE L1 -506 6061 5238 9 1451 3372 69 2 0 chrX 113574280 113574717 -53075579 + L1_Mus1 LINE L1 6128 6565 -2 9 1451 307 367 35 88 chrX 113574778 113575178 -53075118 + MTE2a LTR MaLR 1 379 0 9 1451 316 394 20 16 chrX 113575258 113575511 -53074785 - MERVL_2A-int LTR ERVL -5320 394 141 9 1451 950 189 0 21 chrX 113575533 113575722 -53074574 - B2_Mm2 SINE B2 -9 186 2 9 1451 9321 56 11 7 chrX 113575847 113577179 -53073117 - L1Md_F3 LINE L1 0 6584 5235 9 1451 603 0 0 0 chrX 113577179 113577246 -53073050 + (TA)n Simple_repeat Simple_repeat 2 68 0 9 1451 9321 72 10 19 chrX 113577246 113577901 -53072395 - L1Md_F3 LINE L1 -649 5234 4601 9 1451 17819 41 286 19 chrX 113577921 113582794 -53067502 - L1Md_A LINE L1 0 6585 304 9 1451 237 108 0 0 chrX 113582988 113583025 -53067271 + (TGG)n Simple_repeat Simple_repeat 3 39 0 1 1451 340 224 147 0 chrX 113583083 113583226 -53067070 - L1_Mur3 LINE L1 -2398 3482 3319 1 1451 2178 158 3 0 chrX 113583228 113583575 -53066721 + L1_Mur1 LINE L1 5411 5758 -128 1 1451 10454 113 8 11 chrX 113583674 113585300 -53064996 - L1_Mm LINE L1 -1400 4483 2863 1 1451 5479 100 5 1 chrX 113585300 113586063 -53064233 + L1_Mus1 LINE L1 5802 6567 0 1 1451 30 59 0 0 chrX 113586076 113586127 -53064169 + AT_rich Low_complexity Low_complexity 1 51 0 1 1451 2631 78 3 50 chrX 113586149 113586529 -53063767 - L1_Mus2 LINE L1 -15 6551 6190 1 1451 1125 290 85 24 chrX 113586530 113587209 -53063087 - L1_Mur3 LINE L1 -2623 3257 2537 1 1451 22 0 0 0 chrX 113588969 113588991 -53061305 + AT_rich Low_complexity Low_complexity 1 22 0 1 1451 1267 294 117 57 chrX 113589044 113589661 -53060635 - Lx8 LINE L1 -339 7134 6481 1 1451 388 293 73 81 chrX 113589670 113589930 -53060366 + Lx8 LINE L1 7209 7466 -7 1 1451 210 174 0 0 chrX 113590399 113590445 -53059851 + GA-rich Low_complexity Low_complexity 2 47 0 1 1451 22 35 0 0 chrX 113590812 113590841 -53059455 + AT_rich Low_complexity Low_complexity 1 29 0 1 1451 396 273 136 118 chrX 113592488 113592775 -53057521 - RMER2 LTR ERV1 -26 541 250 1 1451 9077 159 12 25 chrX 113592781 113593511 -53056785 - L1_Mus4 LINE L1 -631 6005 5323 1 1451 3665 106 31 2 chrX 113593511 113594058 -53056238 + L1_Mus3 LINE L1 6076 6638 0 1 1451 9077 174 19 33 chrX 113594058 113594863 -53055433 - L1_Mus4 LINE L1 -561 5322 4531 1 1451 495 0 0 0 chrX 113594863 113594918 -53055378 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 1451 581 118 0 9 chrX 113594919 113595030 -53055266 + (TA)n Simple_repeat Simple_repeat 2 111 0 1 1451 9077 174 19 33 chrX 113595030 113595421 -53054875 - L1_Mus4 LINE L1 -1353 4530 4107 1 1451 456 240 87 0 chrX 113597097 113597201 -53053095 - RSINE1 SINE B4 -42 123 11 1 1451 35 0 0 0 chrX 113597420 113597455 -53052841 + AT_rich Low_complexity Low_complexity 1 35 0 1 1451 308 181 12 0 chrX 113597692 113597775 -53052521 + (TG)n Simple_repeat Simple_repeat 2 85 0 1 1451 21 36 0 0 chrX 113597848 113597876 -53052420 + AT_rich Low_complexity Low_complexity 1 28 0 1 1451 21 0 0 0 chrX 113598013 113598034 -53052262 + AT_rich Low_complexity Low_complexity 1 21 0 1 1451 35 41 0 0 chrX 113598069 113598118 -53052178 + AT_rich Low_complexity Low_complexity 1 49 0 1 1451 725 346 132 40 chrX 113599426 113600077 -53050219 + RMER1C Other Other 617 1327 -15 1 1451 4468 134 5 17 chrX 113600155 113601429 -53048867 + L1Md_A LINE L1 466 1721 -4162 1 1451 36839 28 3 7 chrX 113601427 113606832 -53043464 + L1Md_A LINE L1 210 5586 -297 1 1451 9004 3 0 0 chrX 113606832 113607828 -53042468 + L1Md_A LINE L1 5587 6582 0 1 1451 18393 123 13 34 chrX 113608176 113614771 -53035525 + L1_Mus1 LINE L1 179 6565 -2 1 1451 184 333 65 59 chrX 113614782 113614935 -53035361 - L2 LINE L2 -876 2543 2390 1 1451 867 59 0 0 chrX 113616545 113616663 -53033633 + (TG)n Simple_repeat Simple_repeat 1 118 0 1 1451 225 0 0 0 chrX 113616665 113616690 -53033606 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 1451 291 367 16 7 chrX 113616852 113617003 -53033293 - MIRb SINE MIR -32 236 75 1 1451 526 38 38 0 chrX 113617855 113617935 -53032361 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 1 1451 186 43 0 0 chrX 113617935 113617958 -53032338 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 1451 22 35 0 0 chrX 113618366 113618395 -53031901 + AT_rich Low_complexity Low_complexity 1 29 0 1 1451 509 250 52 0 chrX 113618493 113618609 -53031687 + B3 SINE B2 2 123 -93 1 1451 297 280 0 9 chrX 113618609 113618717 -53031579 - L1_Mur3 LINE L1 -4246 1634 1528 1 1451 333 0 0 0 chrX 113618724 113618761 -53031535 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1 1451 1446 138 53 20 chrX 113618765 113619087 -53031209 - Lx3C LINE L1 -8 6973 6597 1 1451 232 213 0 62 chrX 113619095 113619160 -53031136 - L1_Rod LINE L1 -4316 1531 1471 1 1451 2028 92 69 3 chrX 113619522 113619826 -53030470 - Lx3_Mus LINE L1 -8 7001 6678 1 1451 522 0 0 0 chrX 113620567 113620625 -53029671 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 1451 273 185 19 0 chrX 113620794 113620848 -53029448 + Lx8 LINE L1 6281 6335 -1138 1 1451 1568 150 0 84 chrX 113621273 113621571 -53028725 + RLTR23 LTR ERV1 1 273 -157 1 1451 604 296 82 64 chrX 113621608 113622142 -53028154 - L1MA5 LINE L1 -473 5827 5284 1 1451 1692 194 92 32 chrX 113622142 113622546 -53027750 + ORR1C2 LTR MaLR 1 375 -9 1 1451 514 389 48 14 chrX 113622576 113622931 -53027365 + ORR1C2-int LTR MaLR 1 367 -1213 1 1451 2632 48 158 0 chrX 113623292 113623647 -53026649 + IAPLTR2a LTR ERVK 1 411 0 1 1451 3534 87 12 30 chrX 113623648 113624559 -53025737 + IAPEz-int LTR ERVK 9 662 -5819 1 1451 2627 76 0 3 chrX 113624559 113624902 -53025394 + IAPEz-int LTR ERVK 1359 1700 -4781 1 1451 6161 56 33 17 chrX 113624895 113625713 -53024583 + IAPEz-int LTR ERVK 5651 6481 0 1 1451 2667 37 158 0 chrX 113625713 113626068 -53024228 + IAPLTR2a LTR ERVK 1 411 0 1 1451 368 408 113 33 chrX 113626068 113626583 -53023713 + ORR1C2-int LTR MaLR 781 1336 -244 1 1451 333 77 54 21 chrX 113626598 113626691 -53023605 + T-rich Low_complexity Low_complexity 2 97 0 1 1451 413 293 59 75 chrX 113626691 113626838 -53023458 + ORR1C2-int LTR MaLR 1402 1534 -46 1 1451 258 345 65 83 chrX 113626911 113627148 -53023148 + ORR1E LTR MaLR 80 305 -73 1 1451 356 0 0 22 chrX 113627164 113627209 -53023087 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1451 229 285 68 63 chrX 113627238 113627429 -53022867 - L1M3 LINE L1 -886 5254 5063 1 1451 252 0 0 0 chrX 113627967 113627995 -53022301 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 1 1451 21363 172 8 18 chrX 113628191 113630082 -53020214 - Lx2 LINE L1 0 6997 5115 1 1451 2257 23 0 0 chrX 113630082 113630347 -53019949 - L1Md_A LINE L1 0 6582 6318 1 1451 21363 175 16 33 chrX 113630347 113630707 -53019589 - Lx2 LINE L1 -772 5114 4738 1 1451 261 0 0 0 chrX 113630707 113630736 -53019560 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1 1451 258 32 0 0 chrX 113630738 113630769 -53019527 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1 1451 21363 175 16 33 chrX 113630769 113632481 -53017815 - Lx2 LINE L1 -1149 4737 3064 1 1451 180 0 0 0 chrX 113632481 113632501 -53017795 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1451 21363 175 16 33 chrX 113632501 113634071 -53016225 - Lx2 LINE L1 -2823 3063 1546 1 1451 431 57 0 91 chrX 113634072 113634112 -53016184 - L1_Mus2 LINE L1 0 6566 6533 1 1451 3078 56 2 18 chrX 113634112 113634513 -53015783 + MTA_Mm LTR MaLR 2 396 0 1 1451 431 57 0 91 chrX 113634513 113634549 -53015747 - L1_Mus2 LINE L1 -34 6532 6497 1 1451 21 104 0 0 chrX 113634636 113634713 -53015583 + AT_rich Low_complexity Low_complexity 1 77 0 1 1451 426 231 0 40 chrX 113634993 113635126 -53015170 + B3 SINE B2 2 210 -6 1 1451 1147 206 99 19 chrX 113635400 113635693 -53014603 + RMER19A LTR ERVK 297 737 0 1 1451 1868 148 49 0 chrX 113635726 113636030 -53014266 - ORR1A2 LTR MaLR -8 319 1 1 1451 7748 169 72 9 chrX 113636030 113637584 -53012712 - ORR1A2-int LTR MaLR 0 1963 312 1 181 31382 82 4 5 chrX 113637585 113641426 -53008870 + L1Md_F2 LINE L1 392 4228 -1655 1 1452 1642 26 0 20 chrX 113641426 113641622 -53008674 + B2_Mm1a SINE B2 2 193 0 1 1452 31382 83 1 7 chrX 113641622 113642988 -53007308 + L1Md_F2 LINE L1 4229 5585 -298 1 1452 8073 49 3 0 chrX 113642989 113643981 -53006315 + L1Md_F2 LINE L1 5587 6581 -1 1 1452 2752 56 0 0 chrX 113643981 113644321 -53005975 + L1Md_F2 LINE L1 5246 5585 -298 1 1452 8060 47 0 2 chrX 113644322 113645307 -53004989 + L1Md_F2 LINE L1 5587 6569 -13 1 1452 1428 70 5 0 chrX 113645325 113645524 -53004772 + L1Md_F2 LINE L1 6382 6581 -1 1 1452 1379 124 23 78 chrX 113645537 113645716 -53004580 + Lx9 LINE L1 7352 7514 -130 1 1452 1281 61 0 0 chrX 113645716 113645896 -53004400 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 1452 1379 124 23 78 chrX 113645896 113646022 -53004274 + Lx9 LINE L1 7515 7640 -4 1 1452 1577 192 49 0 chrX 113646032 113646044 -53004252 - ORR1A2-int LTR MaLR -1640 323 312 1 1452 4548 59 0 10 chrX 113646044 113646627 -53003669 - L1Md_F2 LINE L1 -1 6581 6005 1 1452 1577 192 49 0 chrX 113646627 113646922 -53003374 - ORR1A2-int LTR MaLR -1652 311 2 1 1452 1785 143 41 9 chrX 113646922 113647239 -53003057 - ORR1A2 LTR MaLR 0 327 1 1 1452 537 16 0 0 chrX 113647374 113647436 -53002860 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 1452 363 292 46 23 chrX 113647466 113647641 -53002655 - L1M2 LINE L1 -888 5255 5077 1 1452 1587 289 65 16 chrX 113647901 113648411 -53001885 + Lx5 LINE L1 6483 7017 -33 1 1452 206 106 64 0 chrX 113648493 113648506 -53001790 + A-rich Low_complexity Low_complexity 1 13 0 1 1452 5618 34 1 0 chrX 113648506 113649209 -53001087 + L1Md_T LINE L1 5912 6582 0 1 1452 452 291 8 0 chrX 113649238 113649355 -53000941 - Lx8 LINE L1 -175 7298 7181 1 1452 346 115 0 0 chrX 113650065 113650117 -53000179 - ORR1B1 LTR MaLR 0 394 343 1 1452 3492 61 2 5 chrX 113650131 113650576 -52999720 - L1_Mus1 LINE L1 -1 6566 6123 1 1452 374 43 0 0 chrX 113650577 113650623 -52999673 + L1_Mus1 LINE L1 5989 6034 -533 1 1452 1504 226 35 18 chrX 113650623 113650965 -52999331 - ORR1B1 LTR MaLR -44 350 3 1 1452 6631 205 50 124 chrX 113650967 113653068 -52997228 - ORR1B1-int LTR MaLR 0 1963 18 1 1452 570 312 29 0 chrX 113653015 113653153 -52997143 + B3 SINE B2 34 175 -41 1 1452 237 65 0 0 chrX 113653792 113653823 -52996473 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 1452 407 349 19 49 chrX 113653970 113654175 -52996121 + MIR SINE MIR 23 221 -41 1 1452 481 351 67 60 chrX 113655437 113655704 -52994592 - B4 SINE B4 -20 272 4 1 1452 1336 251 62 5 chrX 113655883 113655946 -52994350 - ORR1B1 LTR MaLR 0 394 334 1 1452 278 87 22 0 chrX 113655946 113655992 -52994304 + (CAA)n Simple_repeat Simple_repeat 2 48 0 1 1452 1336 251 62 5 chrX 113655992 113656301 -52993995 - ORR1B1 LTR MaLR -61 333 2 1 1452 5470 219 72 10 chrX 113656301 113657722 -52992574 - ORR1B1-int LTR MaLR 0 1509 1 1 1452 1993 212 18 25 chrX 113657722 113658151 -52992145 - ORR1B1 LTR MaLR 0 394 1 1 1452 381 377 48 34 chrX 113658726 113658995 -52991301 - L1M5 LINE L1 -476 5764 5492 1 1452 258 269 45 0 chrX 113659540 113659607 -52990689 + ID_B1 SINE B4 84 153 -71 1 1452 238 319 128 0 chrX 113659607 113659633 -52990663 + PB1D10 SINE Alu 3 107 -10 1 1452 1072 225 20 25 chrX 113660169 113660423 -52989873 + ORR1B2 LTR MaLR 1 259 -111 1 1452 300 111 0 0 chrX 113660423 113660468 -52989828 + (TTC)n Simple_repeat Simple_repeat 2 46 0 1 1452 3735 123 10 14 chrX 113660469 113661062 -52989234 - L1_Mus3 LINE L1 0 6638 6048 1 1452 735 247 38 0 chrX 113661062 113661220 -52989076 + ORR1B2 LTR MaLR 204 367 0 1 1452 248 102 20 0 chrX 113661253 113661302 -52988994 + (CAAA)n Simple_repeat Simple_repeat 3 52 0 1 1452 1708 198 90 27 chrX 113661320 113661595 -52988701 + ORR1B2-int LTR MaLR 1 304 -1205 1 1452 555 56 0 0 chrX 113661595 113661666 -52988630 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 1 1452 2849 224 70 10 chrX 113661666 113662425 -52987871 + ORR1B2-int LTR MaLR 305 1509 0 1 1452 1332 252 41 9 chrX 113662432 113662748 -52987548 + ORR1B2 LTR MaLR 9 334 -33 1 1452 3263 82 9 7 chrX 113662765 113663217 -52987079 - L1_Mus3 LINE L1 -1 6637 6185 1 1452 943 171 108 0 chrX 113663240 113663416 -52986880 - ORR1C1 LTR MaLR -6 372 178 1 1452 391 95 77 51 chrX 113663751 113663829 -52986467 - RLTR23 LTR ERV1 -327 103 24 1 1452 489 236 36 0 chrX 113663934 113664044 -52986252 + RMER20B LTR ERVK 1 114 -513 1 1452 189 0 0 0 chrX 113664212 113664233 -52986063 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 1452 5736 128 8 5 chrX 113664494 113665392 -52984904 - Lx3A LINE L1 0 6981 6081 1 1452 1875 158 16 0 chrX 113665392 113665696 -52984600 + RLTR27 LTR ERVK 1 309 0 1 1452 358 76 45 0 chrX 113665844 113665910 -52984386 + RLTR10-int LTR ERVK 784 852 -1135 1 1452 202 262 0 0 chrX 113665910 113665952 -52984344 + A-rich Low_complexity Low_complexity 1 42 0 1 1452 614 83 0 0 chrX 113666003 113666087 -52984209 + RLTR27 LTR ERVK 226 309 0 1 1452 6249 116 19 12 chrX 113666087 113667263 -52983033 - Lx3A LINE L1 -895 6086 4920 1 1452 2952 139 8 6 chrX 113667264 113667769 -52982527 + Lx3A LINE L1 4413 4918 -968 1 1452 441 290 83 32 chrX 113667855 113668194 -52982102 + Lx7 LINE L1 5162 5517 -363 1 1452 278 304 8 119 chrX 113668270 113668513 -52981783 + Lx7 LINE L1 5699 5914 -1782 1 1452 735 163 163 0 chrX 113668719 113668872 -52981424 + MTB LTR MaLR 223 400 0 2 1452 285 342 106 30 chrX 113668883 113669118 -52981178 + MIR SINE MIR 10 262 0 2 1452 451 275 38 0 chrX 113669316 113669447 -52980849 + B1_Mur2 SINE Alu 1 136 -13 2 1452 1120 255 54 0 chrX 113669508 113669786 -52980510 + Lx7 LINE L1 6717 7009 -687 1 1452 5479 73 0 0 chrX 113669785 113670809 -52979487 - L1Md_F2 LINE L1 -371 6211 5188 2 1452 2840 176 84 39 chrX 113670823 113671729 -52978567 + RLTR13D1 LTR ERVK 10 1023 0 2 1452 3298 82 0 0 chrX 113671740 113672181 -52978115 - L1_Mm LINE L1 -703 5180 4740 2 1452 1155 76 12 12 chrX 113672180 113672340 -52977956 + L1Md_F2 LINE L1 6222 6381 -201 2 1452 419 382 61 69 chrX 113673162 113673553 -52976743 + MLT1A1 LTR MaLR 9 396 -12 2 1452 5217 60 5 3 chrX 113673850 113674516 -52975780 + L1Md_F2 LINE L1 5904 6570 -12 2 1452 1047 223 9 4 chrX 113675556 113675781 -52974515 + URR1A DNA MER1_type 1 226 0 2 1452 934 261 94 20 chrX 113677237 113677535 -52972761 + ORR1B2 LTR MaLR 1 316 -43 2 1452 2496 194 35 13 chrX 113677840 113678361 -52971935 - RMER5 LTR ERV1 -2 532 1 2 1452 1081 72 0 0 chrX 113679072 113679210 -52971086 + B1_Mus1 SINE Alu 2 139 -9 2 1452 285 51 0 0 chrX 113679210 113679249 -52971047 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1452 690 261 112 37 chrX 113680374 113680668 -52969628 + Lx6 LINE L1 7145 7460 0 2 1452 1104 202 7 58 chrX 113681290 113681568 -52968728 + RMER10B LTR ERVL 1 264 -134 2 1452 577 250 37 37 chrX 113681590 113681777 -52968519 + RMER10B LTR ERVL 194 380 -18 2 1452 449 285 45 23 chrX 113682200 113682376 -52967920 - RMER15 LTR ERVL -13 562 383 2 1452 579 307 35 102 chrX 113683349 113683783 -52966513 + RLTR11B LTR ERVK 1 412 -29 2 1452 1527 131 7 32 chrX 113683820 113684097 -52966199 - L1_Mus3 LINE L1 -8 6630 6361 2 1452 2644 159 24 14 chrX 113684098 113684596 -52965700 + L1_Mm LINE L1 4897 5399 -484 2 1452 181 70 51 34 chrX 113684603 113684662 -52965634 + A-rich Low_complexity Low_complexity 2 61 0 2 1452 1429 185 115 3 chrX 113685171 113685459 -52964837 - RMER15 LTR ERVL -38 537 218 2 1452 289 237 85 34 chrX 113685459 113685567 -52964729 - RLTR23 LTR ERV1 0 430 317 2 1452 2068 199 79 11 chrX 113685567 113686024 -52964272 - RMER19A LTR ERVK 0 737 250 2 1452 473 157 0 11 chrX 113686025 113686115 -52964181 - MurERV4_19-int LTR ERVK -984 4796 4708 2 1452 5385 160 31 6 chrX 113686109 113687071 -52963225 - MurERV4_19-int LTR ERVK -3284 2496 1511 2 1452 21 0 0 0 chrX 113687211 113687232 -52963064 + AT_rich Low_complexity Low_complexity 1 21 0 2 1452 929 300 49 32 chrX 113687947 113688289 -52962007 + ORR1D2 LTR MaLR 1 348 -22 2 1452 398 291 55 1 chrX 113688289 113688414 -52961882 + ORR1D1 LTR MaLR 1 132 -238 2 1452 450 0 0 0 chrX 113689377 113689427 -52960869 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1452 385 314 123 6 chrX 113689463 113689633 -52960663 - MER68 LTR ERVL -175 388 199 2 1452 336 253 46 0 chrX 113689707 113689794 -52960502 - RMER15 LTR ERVL 0 575 485 2 1452 1246 246 4 11 chrX 113689802 113690073 -52960223 - MTC LTR MaLR 0 421 153 2 1452 225 116 14 68 chrX 113690061 113690135 -52960161 + RMER17C LTR ERVK 341 410 0 2 1452 3321 251 104 94 chrX 113690137 113691585 -52958711 + RMER17C-int LTR ERVK 2 1428 -1810 2 1452 536 33 41 52 chrX 113691585 113691682 -52958614 - L1Md_F3 LINE L1 0 6584 6489 2 1452 3321 251 104 94 chrX 113691682 113692250 -52958046 + RMER17C-int LTR ERVK 1429 2038 -1200 2 1452 1132 145 20 0 chrX 113692264 113692464 -52957832 + RMER17C-int LTR ERVK 2156 2359 -879 2 1452 2987 182 129 14 chrX 113692452 113693086 -52957210 + RMER17C-int LTR ERVK 2532 3238 0 2 1452 794 181 103 31 chrX 113693086 113693176 -52957120 + RMER17C LTR ERVK 1 90 -320 2 1452 804 74 0 0 chrX 113693176 113693284 -52957012 + (TC)n Simple_repeat Simple_repeat 2 109 0 2 1452 794 181 103 31 chrX 113693284 113693416 -52956880 + RMER17C LTR ERVK 91 239 -171 2 1452 216 0 0 0 chrX 113693548 113693572 -52956724 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1452 309 379 24 8 chrX 113693595 113693720 -52956576 - RSINE1 SINE B4 -36 129 3 2 1452 215 318 16 0 chrX 113694219 113694282 -52956014 - PB1 SINE Alu -63 64 1 2 1452 291 385 138 14 chrX 113694538 113694812 -52955484 - L2a LINE L2 -244 3182 2884 2 1452 418 379 28 38 chrX 113695110 113695321 -52954975 + MER77 LTR ERVL 345 553 -54 2 1452 1909 218 57 22 chrX 113695511 113695999 -52954297 - RLTR16 LTR ERVK 0 505 1 2 1452 2446 214 28 88 chrX 113696054 113696934 -52953362 + L1_Mus3 LINE L1 247 1121 -5520 2 1452 1124 104 16 6 chrX 113696934 113697117 -52953179 + L1Md_F2 LINE L1 6398 6582 0 2 1452 28373 137 4 19 chrX 113697117 113699356 -52950940 + L1_Mus3 LINE L1 1007 3287 -2599 2 1452 3254 42 22 2 chrX 113699356 113699764 -52950532 + L1Md_F3 LINE L1 6169 6584 0 2 1452 28373 128 8 12 chrX 113699764 113703154 -52947142 + L1_Mus3 LINE L1 3288 6641 0 2 1452 1029 60 0 0 chrX 113703422 113703555 -52946741 + (TA)n Simple_repeat Simple_repeat 1 133 0 2 1452 321 253 0 25 chrX 113703609 113703690 -52946606 - L1M4 LINE L1 -485 5686 5608 2 1452 404 303 44 14 chrX 113704259 113704534 -52945762 - L1M4 LINE L1 -772 5374 5092 2 1452 460 343 154 41 chrX 113704750 113705185 -52945111 - MTE-int LTR MaLR -1096 484 1 2 1452 635 37 12 0 chrX 113705227 113705309 -52944987 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 2 1452 3451 122 4 2 chrX 113705940 113706458 -52943838 - L1_Mus3 LINE L1 -1 6637 6119 2 1452 4227 92 2 0 chrX 113706458 113707322 -52942974 + L1_Mus3 LINE L1 5292 6156 -482 2 1452 1518 195 9 65 chrX 113707586 113707926 -52942370 - ORR1A4 LTR MaLR -8 321 1 2 1452 273 333 82 41 chrX 113707926 113708073 -52942223 + B3A SINE B2 46 198 0 2 1452 697 169 12 12 chrX 113708333 113708501 -52941795 + RMER17A2 LTR ERVK 346 513 -393 2 1452 614 321 80 56 chrX 113708653 113709313 -52940983 + L1MD LINE L1 2618 3293 -2853 2 1452 1653 204 32 26 chrX 113709580 113709928 -52940368 + ORR1B1 LTR MaLR 37 386 -8 2 1452 29 0 0 0 chrX 113710033 113710062 -52940234 + AT_rich Low_complexity Low_complexity 1 29 0 2 1452 228 149 0 0 chrX 113710123 113710170 -52940126 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 1452 310 299 147 0 chrX 113710171 113710328 -52939968 + L1MD LINE L1 3530 3709 -2437 2 1452 533 282 141 0 chrX 113710375 113710545 -52939751 + B3 SINE B2 3 196 -20 2 1452 1140 250 72 97 chrX 113710553 113711027 -52939269 + RLTR12B LTR ERVK 38 499 -29 2 1452 29 0 0 0 chrX 113711111 113711140 -52939156 + AT_rich Low_complexity Low_complexity 1 29 0 2 1452 234 328 75 12 chrX 113711163 113711336 -52938960 + L1MD2 LINE L1 6136 6319 -40 2 1452 303 346 79 21 chrX 113711543 113711732 -52938564 + MIRc SINE MIR 39 238 -30 2 1452 22 0 0 0 chrX 113713166 113713188 -52937108 + AT_rich Low_complexity Low_complexity 1 22 0 2 1452 261 283 138 44 chrX 113713695 113713876 -52936420 + MIR SINE MIR 54 251 -11 2 1452 3891 160 31 7 chrX 113713989 113714692 -52935604 - Lx2 LINE L1 -4 6993 6274 2 1452 1714 159 122 3 chrX 113714692 113715038 -52935258 + L1_Mur2 LINE L1 4530 4917 -960 2 1452 3341 55 2 0 chrX 113715040 113715458 -52934838 - L1_Mus3 LINE L1 -611 6027 5609 2 1452 4043 105 3 3 chrX 113715458 113716039 -52934257 + L1_Mus3 LINE L1 6058 6638 0 2 1452 1568 204 19 0 chrX 113716046 113716370 -52933926 + L1_Mur2 LINE L1 4907 5236 -641 2 1452 28 0 0 0 chrX 113717004 113717032 -52933264 + AT_rich Low_complexity Low_complexity 1 28 0 2 1452 24 0 0 0 chrX 113717833 113717857 -52932439 + AT_rich Low_complexity Low_complexity 1 24 0 2 1452 237 65 0 0 chrX 113718228 113718259 -52932037 + (TTA)n Simple_repeat Simple_repeat 2 32 0 2 1452 7493 126 52 21 chrX 113718271 113719672 -52930624 - Lx3A LINE L1 -11 6970 5510 2 1452 8085 121 36 3 chrX 113719688 113721009 -52929287 - Lx3A LINE L1 -2391 3495 2131 2 1452 285 51 0 0 chrX 113721739 113721778 -52928518 + (TC)n Simple_repeat Simple_repeat 1 39 0 2 1452 22 80 0 0 chrX 113722795 113722845 -52927451 + AT_rich Low_complexity Low_complexity 1 50 0 2 1452 492 18 0 0 chrX 113722990 113723047 -52927249 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 1452 210 37 0 0 chrX 113723404 113723431 -52926865 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1452 7043 118 6 1 chrX 113723441 113724528 -52925768 + L1_Mus3 LINE L1 5546 6638 0 2 1452 396 0 0 0 chrX 113724773 113724817 -52925479 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 1452 28 0 0 0 chrX 113724818 113724846 -52925450 + AT_rich Low_complexity Low_complexity 1 28 0 2 1452 3704 74 2 2 chrX 113724846 113725336 -52924960 + L1Md_F2 LINE L1 6092 6581 -1 2 1452 2017 241 36 34 chrX 113725371 113725493 -52924803 - Lx9 LINE L1 -2 7642 7521 2 1452 352 37 37 0 chrX 113725493 113725547 -52924749 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 2 1452 2017 241 36 34 chrX 113725547 113726013 -52924283 - Lx9 LINE L1 -124 7520 7053 2 1452 546 16 0 0 chrX 113726013 113726076 -52924220 + (TA)n Simple_repeat Simple_repeat 1 63 0 2 1452 207 0 0 0 chrX 113726076 113726098 -52924198 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 1452 276 53 0 0 chrX 113726145 113726183 -52924113 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1452 2885 266 85 18 chrX 113726187 113727033 -52923263 + Lx9 LINE L1 6345 7247 -397 2 1452 479 220 31 99 chrX 113727042 113727141 -52923155 + Lx9 LINE L1 7436 7520 -124 2 1452 352 37 37 0 chrX 113727141 113727195 -52923101 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 2 1452 479 220 31 99 chrX 113727195 113727317 -52922979 + Lx9 LINE L1 7521 7642 -2 2 1452 369 0 0 0 chrX 113728068 113728109 -52922187 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1452 1489 227 45 58 chrX 113728165 113728563 -52921733 - RMER10B LTR ERVL 0 398 6 2 1452 513 240 85 81 chrX 113728824 113729060 -52921236 - RMER17C-int LTR ERVK -395 2843 2607 2 1452 260 232 0 14 chrX 113729326 113729396 -52920900 - MYSERV6-int LTR ERVK -177 8782 8714 2 1452 307 259 50 59 chrX 113729388 113729507 -52920789 - RLTR19-int LTR ERVK -2829 3308 3191 2 1452 1841 214 137 22 chrX 113729558 113730094 -52920202 - RLTR19-int LTR ERVK -3108 3029 2451 2 1452 1128 176 122 185 chrX 113730119 113730578 -52919718 + RLTR23 LTR ERV1 1 430 0 2 1452 5775 275 30 32 chrX 113730821 113732504 -52917792 + RodERV21-int LTR ERV1 1040 2718 -2273 2 1452 1613 351 38 58 chrX 113735226 113736631 -52913665 + RodERV21-int LTR ERV1 2925 4301 -690 2 1452 5449 184 66 58 chrX 113736631 113736776 -52913520 - RMER17C-int LTR ERVK -809 2429 2291 2 1452 3214 62 0 28 chrX 113736776 113737210 -52913086 + L1Md_F2 LINE L1 6161 6582 0 2 1452 5449 187 59 69 chrX 113737210 113738521 -52911775 - RMER17C-int LTR ERVK -948 2290 1037 2 1452 238 26 51 0 chrX 113739027 113739066 -52911230 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1452 1458 235 111 103 chrX 113739131 113739809 -52910487 - RMER17C-int LTR ERVK -2535 703 21 2 1452 1025 225 51 102 chrX 113739821 113740040 -52910256 - RMER17C LTR ERVK -1 409 195 2 1452 1221 106 0 0 chrX 113740040 113740220 -52910076 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 2 1452 1025 225 51 102 chrX 113740220 113740431 -52909865 - RMER17C LTR ERVK -216 194 1 2 1452 247 163 11 85 chrX 113740953 113741047 -52909249 + A-rich Low_complexity Low_complexity 1 87 0 2 1452 1195 260 92 29 chrX 113741709 113742157 -52908139 - ERVL-B4-int LTR ERVL -520 5194 4719 2 1452 356 318 9 9 chrX 113742253 113742364 -52907932 + PB1D10 SINE Alu 4 114 -3 2 1452 441 309 55 40 chrX 113743062 113743261 -52907035 - ERVL-B4-int LTR ERVL -3398 2316 2115 2 1452 530 311 127 23 chrX 113743834 113744052 -52906244 + ERVL-B4-int LTR ERVL 217 449 -5265 3 1452 1960 206 35 121 chrX 113744052 113744631 -52905665 - RLTR24 LTR ERV1 0 529 1 3 1452 530 311 127 23 chrX 113744631 113744797 -52905499 + ERVL-B4-int LTR ERVL 450 641 -5073 3 1452 2184 123 0 58 chrX 113745029 113745375 -52904921 + ORR1A3 LTR MaLR 1 326 0 3 1452 335 320 55 0 chrX 113745375 113745503 -52904793 + RMER12 LTR ERVK 712 846 -476 3 1452 278 256 23 11 chrX 113745505 113745592 -52904704 + (TATG)n Simple_repeat Simple_repeat 3 90 0 3 1452 211 286 67 67 chrX 113745809 113745884 -52904412 - B4 SINE B4 -211 81 7 3 1452 254 73 24 0 chrX 113746581 113746622 -52903674 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1452 207 69 0 0 chrX 113747057 113747086 -52903210 + (TTA)n Simple_repeat Simple_repeat 2 30 0 3 1452 229 389 64 14 chrX 113747748 113747889 -52902407 + MLT2B1 LTR ERVL 316 463 -104 3 1452 504 242 10 0 chrX 113747922 113748021 -52902275 - B1_Mur4 SINE Alu -6 144 45 3 1452 2598 186 69 15 chrX 113748831 113749414 -52900882 + RLTR18 LTR ERVK 1 614 -2 3 1452 590 162 43 22 chrX 113749781 113749920 -52900376 - Lx7 LINE L1 -7 7689 7548 3 1452 468 0 0 0 chrX 113749920 113749972 -52900324 + (TTAAA)n Simple_repeat Simple_repeat 3 54 0 3 1452 1771 202 3 57 chrX 113749977 113750344 -52899952 + ORR1B1 LTR MaLR 47 393 -1 3 1452 2992 276 88 89 chrX 113750348 113750611 -52899685 - Lx7 LINE L1 -169 7527 7318 3 1452 1203 107 0 0 chrX 113750611 113750789 -52899507 + (GAAAA)n Simple_repeat Simple_repeat 1 178 0 3 1452 2992 276 88 89 chrX 113750789 113751934 -52898362 - Lx7 LINE L1 -379 7317 6121 3 1452 709 216 29 0 chrX 113751924 113752095 -52898201 - L1_Mur3 LINE L1 -4045 1835 1660 3 1452 5470 3 0 0 chrX 113752135 113752741 -52897555 - L1Md_A LINE L1 0 6582 5977 3 1452 423 279 19 9 chrX 113752811 113752916 -52897380 + RMER13A LTR ERVK 755 860 0 3 1452 1329 249 4 21 chrX 113752924 113753203 -52897093 + ORR1B2 LTR MaLR 55 328 -39 3 1452 5369 209 60 46 chrX 113753205 113754180 -52896116 + ORR1B2-int LTR MaLR 138 1170 -339 3 1452 549 0 0 0 chrX 113754180 113754241 -52896055 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 3 1452 5369 209 60 46 chrX 113754241 113754618 -52895678 + ORR1B2-int LTR MaLR 1171 1509 0 3 1452 1388 231 50 34 chrX 113754618 113754976 -52895320 + ORR1B2 LTR MaLR 1 364 -3 3 1452 374 281 0 9 chrX 113754993 113755108 -52895188 - L1_Mur3 LINE L1 -4231 1649 1536 3 1452 546 265 20 13 chrX 113755112 113755265 -52895031 - L1_Mur3 LINE L1 -7190 538 385 3 1452 797 255 170 61 chrX 113755284 113755614 -52894682 - ORR1D1 LTR MaLR -8 366 1 3 1452 3091 258 116 72 chrX 113755614 113756924 -52893372 - ORR1D1-int LTR MaLR 0 1370 3 3 1452 932 332 67 29 chrX 113756987 113757406 -52892890 - Lx8 LINE L1 -777 6696 6262 3 1452 1334 236 81 11 chrX 113757432 113757780 -52892516 - ORR1D1 LTR MaLR -2 372 1 3 1452 243 0 0 0 chrX 113758057 113758084 -52892212 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1452 876 299 126 29 chrX 113758089 113758934 -52891362 - Lx7 LINE L1 -1782 5914 4999 3 1452 1624 306 114 33 chrX 113758925 113759549 -52890747 - Lx7 LINE L1 -1000 4880 4183 3 1452 429 81 0 0 chrX 113759549 113759611 -52890685 + (TA)n Simple_repeat Simple_repeat 1 62 0 3 1452 1624 302 103 43 chrX 113759611 113760719 -52889577 - Lx7 LINE L1 -1931 4209 3036 3 1452 27 0 0 0 chrX 113761314 113761341 -52888955 + AT_rich Low_complexity Low_complexity 1 27 0 3 1452 261 0 0 0 chrX 113761384 113761413 -52888883 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 1452 314 138 0 17 chrX 113761499 113761540 -52888756 + polypyrimidine Low_complexity Low_complexity 19 59 0 3 1452 1211 90 0 11 chrX 113761540 113761720 -52888576 + (TCTCCC)n Simple_repeat Simple_repeat 3 180 0 3 1452 314 138 0 17 chrX 113761720 113761737 -52888559 + polypyrimidine Low_complexity Low_complexity 2 18 0 3 1452 988 128 0 7 chrX 113761784 113761933 -52888363 - B1_Mus1 SINE Alu 0 148 1 3 1452 270 291 86 0 chrX 113762359 113762476 -52887820 - L1M2 LINE L1 -1078 5065 4939 3 1452 441 0 0 0 chrX 113762486 113762535 -52887761 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 3 1452 2252 25 47 0 chrX 113762734 113763034 -52887262 + L1Md_F3 LINE L1 6271 6584 0 3 1452 297 51 0 0 chrX 113763807 113763846 -52886450 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1452 1213 343 34 14 chrX 113763960 113764401 -52885895 - Lx8 LINE L1 -115 7358 6909 3 1452 278 309 81 0 chrX 113764447 113764570 -52885726 - L1M2 LINE L1 -1078 5065 4933 3 1452 384 22 0 0 chrX 113764574 113764619 -52885677 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 3 1452 435 184 30 0 chrX 113764686 113764854 -52885442 + (TCTA)n Simple_repeat Simple_repeat 4 176 0 3 1452 257 269 49 37 chrX 113764857 113765019 -52885277 - L1_Mur3 LINE L1 -983 4897 4734 3 1452 2125 75 62 0 chrX 113765025 113765330 -52884966 - L1_Mus2 LINE L1 0 6566 6243 3 1452 2138 123 15 6 chrX 113765330 113765664 -52884632 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 1452 24140 47 23 18 chrX 113765664 113768716 -52881580 + IAPEz-int LTR ERVK 8 3076 -3405 3 1452 6463 59 12 18 chrX 113768702 113769551 -52880745 + IAPEz-int LTR ERVK 5630 6473 -8 3 1452 2138 123 15 6 chrX 113769559 113769893 -52880403 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 1452 531 82 0 0 chrX 113769893 113769957 -52880339 - L1_Mus2 LINE L1 -317 6249 6186 3 1452 281 295 71 15 chrX 113769957 113770153 -52880143 - L1M2 LINE L1 -1387 4756 4550 3 181 733 332 69 81 chrX 113770168 113770574 -52879722 + MTD LTR MaLR 18 418 -1 3 1453 2955 42 0 0 chrX 113771222 113771581 -52878715 - L1Md_F2 LINE L1 -12 6570 6212 3 1453 458 41 96 0 chrX 113771699 113771772 -52878524 + L1Md_F3 LINE L1 6505 6584 0 3 1453 24 0 0 0 chrX 113772317 113772341 -52877955 + AT_rich Low_complexity Low_complexity 1 24 0 3 1453 962 68 105 0 chrX 113772511 113772644 -52877652 + B1_Mus1 SINE Alu 2 148 0 3 1453 1008 82 122 7 chrX 113772682 113772830 -52877466 + U1 snRNA snRNA 1 165 0 3 1453 22 35 0 0 chrX 113773182 113773211 -52877085 + AT_rich Low_complexity Low_complexity 1 29 0 3 1453 696 285 44 24 chrX 113773473 113773678 -52876618 + B3 SINE B2 8 216 0 3 1453 21 0 0 0 chrX 113773760 113773781 -52876515 + AT_rich Low_complexity Low_complexity 1 21 0 3 1453 1171 49 12 6 chrX 113773892 113774055 -52876241 - L1Md_F3 LINE L1 -1 6583 6420 3 1453 273 0 0 0 chrX 113774055 113774085 -52876211 + L1_Mm LINE L1 5833 5862 -21 3 1453 455 366 15 11 chrX 113774117 113774382 -52875914 - L1M2 LINE L1 -517 5774 5509 3 1453 240 73 96 12 chrX 113774452 113774535 -52875761 + (TA)n Simple_repeat Simple_repeat 2 91 0 3 1453 285 29 0 0 chrX 113774579 113774613 -52875683 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 1453 24 0 0 0 chrX 113774793 113774817 -52875479 + AT_rich Low_complexity Low_complexity 1 24 0 3 1453 356 343 49 45 chrX 113775543 113775871 -52874425 - L1M5 LINE L1 -577 5585 5264 3 1453 1089 273 78 48 chrX 113775873 113775940 -52874356 - ORR1C2 LTR MaLR 0 384 318 3 1453 186 43 0 0 chrX 113775940 113775963 -52874333 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1453 1089 273 78 48 chrX 113775963 113776111 -52874185 - ORR1C2 LTR MaLR -67 317 157 3 1453 378 0 0 0 chrX 113776111 113776153 -52874143 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 1453 1089 273 78 48 chrX 113776153 113776309 -52873987 - ORR1C2 LTR MaLR -228 156 2 3 1453 1001 390 43 2 chrX 113776610 113777032 -52873264 + MTE-int LTR MaLR 670 1108 -472 3 1453 4400 156 3 1 chrX 113777057 113777787 -52872509 - L1_Mm LINE L1 -208 5675 4945 3 1453 2937 190 24 55 chrX 113777781 113778526 -52871770 - L1_Mur2 LINE L1 -3391 2486 1765 3 1453 719 288 0 14 chrX 113778530 113778745 -52871551 - L1VL4 LINE L1 -5558 744 533 3 1453 21 36 0 0 chrX 113779202 113779230 -52871066 + AT_rich Low_complexity Low_complexity 1 28 0 3 1453 273 29 0 0 chrX 113779302 113779336 -52870960 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1453 595 270 25 231 chrX 113780232 113780623 -52869673 + ORR1D1 LTR MaLR 53 384 0 3 1453 5085 254 47 16 chrX 113780623 113781949 -52868347 + ORR1D1-int LTR MaLR 1 1367 -3 3 1453 2157 236 9 48 chrX 113781931 113782475 -52867821 - RMER13B LTR ERVK 0 908 386 3 1453 938 69 0 22 chrX 113782462 113782596 -52867700 + B1_Mm SINE Alu 17 147 0 3 1453 285 98 0 0 chrX 113782596 113782637 -52867659 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 3 1453 738 101 92 85 chrX 113782637 113782778 -52867518 - RMER13B LTR ERVK -525 383 242 3 1453 3564 226 22 8 chrX 113782778 113783284 -52867012 + Lx5 LINE L1 5591 6108 -942 3 1453 3233 46 5 0 chrX 113783284 113783678 -52866618 - MTA_Mm LTR MaLR 0 396 1 3 1453 3564 226 22 8 chrX 113783678 113783971 -52866325 + Lx5 LINE L1 6109 6401 -649 3 1453 25 0 0 0 chrX 113784051 113784076 -52866220 + AT_rich Low_complexity Low_complexity 1 25 0 3 1453 375 333 60 11 chrX 113784429 113784614 -52865682 + Charlie10 DNA MER1_type 1170 1363 -1459 3 1453 676 247 193 28 chrX 113784630 113784982 -52865314 + Charlie10 DNA MER1_type 1446 1856 -966 3 1453 367 361 81 58 chrX 113784982 113785326 -52864970 - MER92A LTR ERV1 0 412 61 3 1453 25 0 0 0 chrX 113785523 113785548 -52864748 + AT_rich Low_complexity Low_complexity 1 25 0 3 1453 367 299 109 18 chrX 113785638 113785978 -52864318 + Charlie10 DNA MER1_type 2049 2419 -403 3 1453 928 217 83 28 chrX 113786028 113786246 -52864050 + RMER6C LTR ERVK 1 230 -460 3 1453 5920 65 25 2 chrX 113786246 113787035 -52863261 - RLTR13C2 LTR ERVK 0 808 2 3 1453 1513 152 0 4 chrX 113787046 113787291 -52863005 - ETnERV3-int LTR ERVK -28 5780 5537 3 1453 6754 120 49 92 chrX 113787514 113787792 -52862504 - RLTR45-int LTR ERVK -1337 5907 5649 3 1453 3426 69 45 4 chrX 113787792 113788255 -52862041 - RLTR45 LTR ERVK 0 482 1 3 1453 6754 122 47 90 chrX 113788255 113789420 -52860876 - RLTR45-int LTR ERVK -1596 5648 4590 3 1453 398 340 63 66 chrX 113789422 113789771 -52860525 + ORR1D-int LTR MaLR 645 992 -378 3 1453 1732 177 172 2 chrX 113789591 113789993 -52860303 + RMER6C LTR ERVK 221 690 0 3 1453 3542 150 99 2 chrX 113790292 113790925 -52859371 - Lx2B LINE L1 0 7000 6306 3 1453 3620 165 10 7 chrX 113790941 113791618 -52858678 - L1_Mur1 LINE L1 -1690 4196 3518 3 1453 5501 204 72 9 chrX 113791625 113792888 -52857408 - ORR1B2-int LTR MaLR -166 1343 1 3 1453 1825 182 43 0 chrX 113792888 113793240 -52857056 - ORR1B2 LTR MaLR 0 367 1 3 1453 2640 275 26 50 chrX 113793249 113793366 -52856930 + Lx6 LINE L1 6668 6781 -679 3 1453 468 0 0 0 chrX 113793366 113793418 -52856878 + (TTTA)n Simple_repeat Simple_repeat 4 55 0 3 1453 874 118 37 0 chrX 113793418 113793553 -52856743 - B1_Mus1 SINE Alu -4 144 5 3 1453 2640 275 26 50 chrX 113793553 113794247 -52856049 + Lx6 LINE L1 6782 7459 -1 3 1453 20992 101 12 5 chrX 113795419 113796461 -52853835 - L1_Mus1 LINE L1 -1 6566 5557 3 1453 2396 92 0 12 chrX 113796461 113796846 -52853450 - L1Md_F2 LINE L1 0 6582 6228 3 1453 20992 148 19 47 chrX 113796846 113801532 -52848764 - L1_Mus1 LINE L1 -329 5557 1141 3 1453 2212 166 23 10 chrX 113801532 113801927 -52848369 + RLTR9D LTR ERVK 1 400 -3 3 1453 1158 218 55 27 chrX 113801935 113802406 -52847890 + ETnERV2-int LTR ERVK 3 556 -2758 3 1453 14399 199 21 22 chrX 113802429 113806037 -52844259 + ETnERV2-int LTR ERVK 2011 6422 -984 3 1453 384 113 66 66 chrX 113806252 113806328 -52843968 + ETnERV2-int LTR ERVK 7329 7404 -2 3 1453 2280 140 39 13 chrX 113806329 113806719 -52843577 + RLTR9D LTR ERVK 1 400 -3 3 1453 1648 163 79 9 chrX 113806720 113806781 -52843515 - L1_Mur1 LINE L1 -5833 1149 1077 3 1453 4458 109 21 8 chrX 113806781 113807435 -52842861 - L1_Mus3 LINE L1 -3 6635 5973 3 1453 1648 173 174 7 chrX 113807435 113807769 -52842527 - L1_Mur1 LINE L1 -5906 1076 694 3 1453 26 0 0 0 chrX 113807830 113807856 -52842440 + AT_rich Low_complexity Low_complexity 1 26 0 3 1453 2199 236 115 29 chrX 113807856 113808664 -52841632 + RMER6C LTR ERVK 1 715 -5 3 1453 360 59 0 0 chrX 113808804 113808855 -52841441 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1453 726 12 0 0 chrX 113808855 113808937 -52841359 + (TA)n Simple_repeat Simple_repeat 1 83 0 3 1453 279 0 0 0 chrX 113809217 113809248 -52841048 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1453 429 258 0 134 chrX 113809253 113809432 -52840864 - Lx9 LINE L1 -517 7127 6973 3 1453 2125 192 10 8 chrX 113809454 113809848 -52840448 + MT2A LTR ERVL 3 397 -136 3 1453 378 304 77 24 chrX 113810132 113810341 -52839955 - L1MEc LINE L1 -6097 303 84 4 1453 305 174 0 14 chrX 113810446 113810516 -52839780 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 1453 4708 74 0 11 chrX 113810621 113811250 -52839046 + L1Md_F2 LINE L1 5959 6580 -2 4 1453 226 82 20 39 chrX 113812851 113812902 -52837394 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 4 1453 667 229 7 40 chrX 113812912 113813062 -52837234 - B1_Mus1 SINE Alu -1 147 3 4 1453 222 156 0 0 chrX 113813139 113813184 -52837112 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1453 387 0 0 0 chrX 113813261 113813304 -52836992 + (A)n Simple_repeat Simple_repeat 1 43 0 4 1453 264 185 0 0 chrX 113813418 113813472 -52836824 + CT-rich Low_complexity Low_complexity 3 56 0 4 1453 465 110 0 0 chrX 113813467 113813549 -52836747 + (TTTC)n Simple_repeat Simple_repeat 4 85 0 4 1453 230 204 0 0 chrX 113813575 113813624 -52836672 + LTR48B LTR ERV1 183 231 -413 4 1453 357 296 122 25 chrX 113813705 113813909 -52836387 + LTR48B LTR ERV1 380 603 -41 4 1453 939 43 0 0 chrX 113813999 113814115 -52836181 + (TA)n Simple_repeat Simple_repeat 2 117 0 4 1453 291 312 196 37 chrX 113814497 113814660 -52835636 + Tigger7 DNA MER2_type 181 369 -2122 4 1453 677 312 135 3 chrX 113814941 113815253 -52835043 - ORR1E LTR MaLR -4 355 3 4 1453 1796 94 0 8 chrX 113815959 113816216 -52834080 - L1_Mus3 LINE L1 -528 6110 5856 4 1453 251 81 0 0 chrX 113816216 113816253 -52834043 + L1_Mus3 LINE L1 6365 6401 -237 4 1453 5262 202 48 10 chrX 113816447 113817575 -52832721 + Lx4B LINE L1 5852 7022 -36 4 1453 342 0 0 0 chrX 113817603 113817641 -52832655 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 4 1453 725 289 25 6 chrX 113817825 113818040 -52832256 - B3A SINE B2 0 216 1 4 1453 273 29 0 0 chrX 113818466 113818500 -52831796 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 4 1453 555 16 0 0 chrX 113818550 113818614 -52831682 + (CAAAA)n Simple_repeat Simple_repeat 3 66 0 4 1453 230 318 47 12 chrX 113819682 113819768 -52830528 - L1M3e LINE L1 -6741 289 201 4 1453 1075 269 151 15 chrX 113820240 113820415 -52829881 - MTE2a LTR MaLR 0 379 205 4 1453 243 0 0 0 chrX 113820415 113820442 -52829854 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 4 1453 1075 269 151 15 chrX 113820442 113820598 -52829698 - MTE2a LTR MaLR -175 204 4 4 1453 283 83 0 0 chrX 113820771 113820807 -52829489 - U2 snRNA snRNA -152 36 1 4 1453 26 0 0 0 chrX 113821146 113821172 -52829124 + AT_rich Low_complexity Low_complexity 1 26 0 4 1453 237 132 0 0 chrX 113821229 113821267 -52829029 + (TAA)n Simple_repeat Simple_repeat 2 39 0 4 1453 462 379 22 6 chrX 113821334 113821512 -52828784 + B4A SINE B4 1 181 -111 4 1453 435 347 69 25 chrX 113821617 113821821 -52828475 + B4A SINE B4 64 276 -16 4 1453 267 31 0 0 chrX 113822699 113822731 -52827565 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1453 403 314 54 43 chrX 113822776 113823093 -52827203 - HERVL40-int LTR ERVL -25 5505 5285 4 1453 472 56 0 27 chrX 113823363 113823437 -52826859 + (TA)n Simple_repeat Simple_repeat 1 72 0 4 1453 263 28 28 0 chrX 113823437 113823472 -52826824 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1453 333 47 0 0 chrX 113823472 113823514 -52826782 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 1453 28 0 0 0 chrX 113824334 113824362 -52825934 + AT_rich Low_complexity Low_complexity 1 28 0 4 1453 180 0 0 0 chrX 113825489 113825509 -52824787 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 1453 1107 211 5 0 chrX 113825723 113825927 -52824369 + URR1A DNA MER1_type 22 226 0 4 1453 2405 323 57 37 chrX 113825982 113827138 -52823158 + Lx7 LINE L1 5993 7171 -525 4 1453 38560 41 1 8 chrX 113827228 113833267 -52817029 - L1Md_T LINE L1 0 6585 563 4 1453 1596 228 101 101 chrX 113833312 113833649 -52816647 + RLTR20B3 LTR ERVK 21 365 -212 4 1453 1057 95 0 0 chrX 113833649 113833796 -52816500 + B1_Mus2 SINE Alu 1 147 0 4 1453 1596 228 101 101 chrX 113833796 113833994 -52816302 + RLTR20B3 LTR ERVK 366 556 -21 4 1453 26 74 0 0 chrX 113834213 113834267 -52816029 + AT_rich Low_complexity Low_complexity 1 54 0 4 1453 388 319 93 16 chrX 113834268 113834450 -52815846 - B3 SINE B2 -13 203 8 4 1453 701 86 19 0 chrX 113834853 113834958 -52815338 + (GGAA)n Simple_repeat Simple_repeat 4 110 0 4 1453 206 232 0 18 chrX 113834967 113835024 -52815272 + GA-rich Low_complexity Low_complexity 2 57 0 4 1453 231 114 0 0 chrX 113835024 113835059 -52815237 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 4 1453 342 0 0 0 chrX 113835307 113835345 -52814951 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 4 1453 201 190 16 79 chrX 113835354 113835417 -52814879 + T-rich Low_complexity Low_complexity 3 61 0 4 1453 643 249 91 0 chrX 113835451 113835616 -52814680 - Lx5 LINE L1 -4 7046 6867 4 1453 2233 126 81 8 chrX 113835619 113836002 -52814294 - IAPLTR2a LTR ERVK 0 411 1 4 1453 6085 43 4 7 chrX 113836002 113836750 -52813546 - IAPEz-int LTR ERVK 0 6481 5736 4 1453 2251 61 0 0 chrX 113836749 113837027 -52813269 - IAPEz-int LTR ERVK -4845 1636 1359 4 1453 3341 87 38 40 chrX 113837027 113837669 -52812627 - IAPEz-int LTR ERVK -5819 662 168 4 1453 229 273 0 0 chrX 113837669 113837713 -52812583 - RLTR27 LTR ERVK -34 275 232 4 1453 464 123 11 94 chrX 113837713 113837851 -52812445 - IAPEz-int LTR ERVK -6357 124 10 4 1453 379 122 81 0 chrX 113837858 113837932 -52812364 - IAPEz-int LTR ERVK -1905 82 3 4 1453 2175 127 84 8 chrX 113837934 113838316 -52811980 - IAPLTR2a LTR ERVK 0 411 1 4 1453 1534 268 42 3 chrX 113838316 113838694 -52811602 - Lx5 LINE L1 -183 6867 6475 4 1453 17236 191 31 33 chrX 113838691 113841213 -52809083 - L1_Mur2 LINE L1 -518 5359 2877 4 1453 5431 83 35 5 chrX 113841213 113841973 -52808323 - L1_Mus2 LINE L1 0 6566 5784 4 1453 17236 191 31 33 chrX 113841973 113842762 -52807534 - L1_Mur2 LINE L1 -3001 2876 2052 4 1453 309 109 0 0 chrX 113842762 113842808 -52807488 + (TATG)n Simple_repeat Simple_repeat 2 47 0 4 1453 17236 191 31 33 chrX 113842808 113843005 -52807291 - L1_Mur2 LINE L1 -3826 2051 1871 4 1453 1082 88 0 26 chrX 113843005 113843157 -52807139 + B1_Mus1 SINE Alu 1 148 0 4 1453 17236 193 55 26 chrX 113843157 113844061 -52806235 - L1_Mur2 LINE L1 -4007 1870 871 4 1453 282 291 32 48 chrX 113844597 113844740 -52805556 - ORR1D2 LTR MaLR -8 362 228 4 1453 293 309 0 154 chrX 113845153 113845302 -52804994 - ORR1D2 LTR MaLR -248 126 1 4 1453 326 156 16 0 chrX 113845683 113845747 -52804549 + GA-rich Low_complexity Low_complexity 2 66 0 4 1453 230 0 33 0 chrX 113846978 113847008 -52803288 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1453 659 264 72 33 chrX 113847542 113847722 -52802574 + ORR1D2 LTR MaLR 1 187 -183 4 1453 249 262 75 0 chrX 113847760 113847840 -52802456 + ORR1D2 LTR MaLR 285 370 0 4 1453 275 336 0 78 chrX 113847934 113848039 -52802257 + MLT1F1 LTR MaLR 399 495 -65 4 1453 606 279 124 17 chrX 113848331 113848564 -52801732 - RMER5 LTR ERV1 -57 477 220 4 1453 278 295 63 54 chrX 113848582 113848693 -52801603 - RMER5 LTR ERV1 -367 167 56 4 1453 643 327 22 4 chrX 113848879 113849106 -52801190 - RMER15 LTR ERVL -2 573 343 4 1453 374 284 51 115 chrX 113849111 113849346 -52800950 - RMER15 LTR ERVL -353 222 3 4 1453 248 320 62 0 chrX 113849621 113849718 -52800578 - MLT1F1 LTR MaLR -12 557 455 4 1453 1144 56 21 0 chrX 113849907 113850050 -52800246 - B1_Mus1 SINE Alu 0 148 3 4 1453 680 83 9 0 chrX 113850181 113850290 -52800006 + (GA)n Simple_repeat Simple_repeat 1 110 0 4 1453 516 271 0 0 chrX 113850298 113850416 -52799880 - B1_Mur2 SINE Alu -31 118 1 4 1453 1791 227 20 16 chrX 113850536 113850819 -52799477 + RLTR40 LTR ERVK 16 301 -516 4 1453 234 0 0 0 chrX 113850819 113850845 -52799451 + (TA)n Simple_repeat Simple_repeat 1 26 0 4 1453 1791 227 20 16 chrX 113850845 113850999 -52799297 + RLTR40 LTR ERVK 302 454 -363 4 1453 1169 54 0 0 chrX 113851019 113851166 -52799130 - B1_Mm SINE Alu 0 147 1 4 1453 1945 195 38 89 chrX 113851175 113851647 -52798649 + RLTR40 LTR ERVK 366 813 -4 4 1453 556 256 96 31 chrX 113852111 113852360 -52797936 + MT2A LTR ERVL 1 298 -195 4 1453 582 15 0 0 chrX 113852360 113852427 -52797869 + (TC)n Simple_repeat Simple_repeat 2 68 0 4 1453 519 218 74 47 chrX 113852427 113852494 -52797802 + MT2A LTR ERVL 180 250 -283 4 1453 1644 142 149 19 chrX 113852494 113852810 -52797486 - Lx4A LINE L1 -69 6989 6633 4 1453 237 208 221 65 chrX 113852928 113853005 -52797291 - 5S rRNA rRNA -31 90 2 4 1453 331 304 12 25 chrX 113853406 113853487 -52796809 - B1_Mus1 SINE Alu -58 90 11 4 1453 3527 71 30 0 chrX 113853672 113854137 -52796159 - L1_Mus1 LINE L1 -1 6566 6088 4 1453 406 182 0 0 chrX 113854337 113854414 -52795882 + Lx2A1 LINE L1 6926 7002 -6 4 1453 1160 49 7 0 chrX 113854423 113854567 -52795729 + B1_Mus1 SINE Alu 1 145 -3 4 1453 252 59 0 0 chrX 113854567 113854601 -52795695 + (CAA)n Simple_repeat Simple_repeat 2 35 0 4 1453 665 331 75 24 chrX 113854651 113854905 -52795391 + B4A SINE B4 8 274 -18 4 1453 1086 314 9 9 chrX 113855129 113855444 -52794852 - MTD LTR MaLR 0 419 105 4 1453 1090 86 0 0 chrX 113855444 113855583 -52794713 + B1_Mus1 SINE Alu 1 139 -9 4 1453 205 27 26 51 chrX 113855594 113855633 -52794663 + (CAAAAA)n Simple_repeat Simple_repeat 2 39 0 4 1453 376 253 0 0 chrX 113855633 113855712 -52794584 - MTD LTR MaLR -298 121 43 4 1453 234 227 0 57 chrX 113855712 113855782 -52794514 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 4 1453 279 0 0 0 chrX 113857594 113857625 -52792671 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 4 1453 2712 236 13 38 chrX 113857679 113858314 -52791982 - RLTR17 LTR ERVK -73 619 1 4 1453 3157 201 20 26 chrX 113858334 113859089 -52791207 - RMER3D-int LTR ERVK -25 2817 2068 4 1453 526 236 66 32 chrX 113859101 113859373 -52790923 - RMER3D-int LTR ERVK -1991 851 387 4 1453 566 128 35 0 chrX 113859382 113859468 -52790828 - BGLII_A LTR ERVK -356 89 1 4 1453 1037 230 85 17 chrX 113860447 113861022 -52789274 + L1VL4 LINE L1 549 1077 -5557 4 1453 905 201 19 162 chrX 113861022 113861385 -52788911 - RLTRETN_Mm LTR ERVK 0 322 12 4 1453 8922 244 43 94 chrX 113861390 113864323 -52785973 + L1VL4 LINE L1 1072 3743 -2143 4 1453 396 0 0 0 chrX 113864323 113864367 -52785929 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1453 8922 258 43 104 chrX 113864367 113866141 -52784155 + L1VL4 LINE L1 3744 5503 -383 4 1453 6351 118 45 8 chrX 113866143 113867271 -52783025 - Lx LINE L1 -32 6622 5452 4 1453 1731 177 3 0 chrX 113867457 113867779 -52782517 - Lx LINE L1 -431 5452 5130 4 1453 1632 155 3 67 chrX 113867783 113868081 -52782215 - ORR1A2 LTR MaLR -48 279 1 4 1453 2299 163 2 20 chrX 113868081 113868487 -52781809 - ORR1A2-int LTR MaLR 0 1963 1565 4 1453 367 357 16 8 chrX 113868511 113868638 -52781658 - ORR1E LTR MaLR -231 128 1 4 1453 468 293 132 35 chrX 113868640 113868717 -52781579 - Lx8 LINE L1 -1086 6387 6299 4 1453 1434 94 37 45 chrX 113868717 113868963 -52781333 + L1_Mus3 LINE L1 6394 6637 -1 4 1453 468 293 132 35 chrX 113868963 113869143 -52781153 - Lx8 LINE L1 -1175 6298 6105 4 1453 260 330 42 21 chrX 113869288 113869480 -52780816 - Lx9 LINE L1 -1679 5965 5770 4 1453 3669 277 70 54 chrX 113869494 113870701 -52779595 - ORR1E-int LTR MaLR -144 1226 1 4 1453 340 262 161 55 chrX 113870714 113870890 -52779406 - ORR1E LTR MaLR -15 369 186 4 1453 795 318 124 11 chrX 113870950 113871217 -52779079 + MTD LTR MaLR 32 328 -91 4 1453 751 160 0 0 chrX 113871341 113871466 -52778830 - L1_Mur1 LINE L1 -2094 3792 3668 4 1453 5643 128 25 11 chrX 113871466 113872372 -52777924 + L1_Mus4 LINE L1 5713 6631 -5 4 1453 319 277 0 0 chrX 113872618 113872683 -52777613 + Tigger5 DNA MER2_type 166 230 -2176 4 1453 25 31 0 0 chrX 113873350 113873382 -52776914 + AT_rich Low_complexity Low_complexity 1 32 0 4 1453 374 302 67 8 chrX 113874959 113875079 -52775217 + B1_Mur1 SINE Alu 22 148 -1 5 1453 21 0 0 0 chrX 113875172 113875193 -52775103 + AT_rich Low_complexity Low_complexity 1 21 0 5 1453 266 328 73 35 chrX 113875307 113875651 -52774645 + L1M2 LINE L1 2652 3008 -3135 5 1453 4384 84 53 46 chrX 113875663 113875933 -52774363 - L1_Mus3 LINE L1 -3 6635 6371 5 1453 319 0 21 42 chrX 113875933 113875981 -52774315 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 5 1453 4384 84 53 46 chrX 113875981 113876406 -52773890 - L1_Mus3 LINE L1 -268 6370 5935 5 1453 734 329 132 37 chrX 113876408 113877588 -52772708 + L1M2 LINE L1 3628 4931 -1212 5 1453 2438 179 43 107 chrX 113877588 113878325 -52771971 - RMER6C LTR ERVK 0 690 1 5 1453 734 329 132 37 chrX 113878325 113878719 -52771577 + L1M2 LINE L1 4932 5352 -791 5 1453 932 238 37 0 chrX 113878717 113878986 -52771310 + Lx9 LINE L1 7236 7514 -130 5 1453 221 217 16 32 chrX 113878987 113879042 -52771254 + (TATG)n Simple_repeat Simple_repeat 1 55 0 5 1453 476 105 0 13 chrX 113879042 113879119 -52771177 + (CA)n Simple_repeat Simple_repeat 1 76 0 5 1453 221 217 16 32 chrX 113879119 113879125 -52771171 + (TATG)n Simple_repeat Simple_repeat 3 8 0 5 1453 1551 234 25 49 chrX 113879375 113879997 -52770299 + L1_Mur1 LINE L1 802 1402 -4475 5 1453 1960 206 48 53 chrX 113879999 113880563 -52769733 + RLTR31_Mm LTR ERVK 1 561 0 5 1453 338 183 0 0 chrX 113880563 113880623 -52769673 + RMER3D-int LTR ERVK 1 60 -2782 5 1453 209 33 0 32 chrX 113880632 113880663 -52769633 + (TTTTA)n Simple_repeat Simple_repeat 4 33 0 5 1453 4426 229 225 73 chrX 113880723 113881537 -52768759 + RMER3D-int LTR ERVK 168 1386 -1456 5 1453 408 20 0 0 chrX 113881537 113881586 -52768710 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1453 4426 201 80 98 chrX 113881586 113883002 -52767294 + RMER3D-int LTR ERVK 1387 2811 -31 5 1453 216 0 0 0 chrX 113883002 113883026 -52767270 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 1453 4426 201 80 98 chrX 113883026 113883047 -52767249 + RMER3D-int LTR ERVK 2812 2839 -3 5 1453 1871 235 35 48 chrX 113883049 113883617 -52766679 + RLTR31_Mm LTR ERVK 1 561 0 5 1453 7428 194 68 36 chrX 113883617 113883937 -52766359 + L1_Mur1 LINE L1 1399 1717 -4160 5 1453 1007 97 0 0 chrX 113883937 113884071 -52766225 + B1_Mm SINE Alu 2 135 -12 5 1453 270 0 0 0 chrX 113884072 113884102 -52766194 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5 1453 7428 194 68 36 chrX 113884102 113884582 -52765714 + L1_Mur1 LINE L1 1718 2202 -3675 5 1453 180 0 0 0 chrX 113884582 113884602 -52765694 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 1453 7428 194 68 36 chrX 113884602 113885792 -52764504 + L1_Mur1 LINE L1 2203 3456 -2421 5 1453 641 81 0 0 chrX 113885805 113885892 -52764404 - MTB_Mm LTR MaLR 0 407 321 5 1453 20570 68 10 2 chrX 113885922 113889335 -52760961 - L1Md_F2 LINE L1 0 6582 3141 5 1453 1887 127 25 35 chrX 113889335 113889652 -52760644 - MTB_Mm LTR MaLR -91 316 3 5 1453 914 197 24 66 chrX 113889652 113889683 -52760613 + L1_Mur1 LINE L1 3464 3485 -2392 5 1453 3466 113 32 13 chrX 113889683 113890237 -52760059 + L1_Mus4 LINE L1 6072 6636 0 5 1453 914 197 24 66 chrX 113890237 113890417 -52759879 + L1_Mur1 LINE L1 3486 3666 -2211 5 1453 13749 185 57 15 chrX 113890652 113893996 -52756300 + L1VL2 LINE L1 820 4328 -1558 5 1453 228 67 0 0 chrX 113895349 113895379 -52754917 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 5 1453 468 0 0 0 chrX 113895758 113895810 -52754486 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1453 290 294 0 64 chrX 113896129 113896238 -52754058 - RLTR45-int LTR ERVK -5918 1326 1225 5 1453 266 209 119 0 chrX 113896263 113896330 -52753966 - RLTR45-int LTR ERVK -5994 1250 1176 5 1453 789 285 39 46 chrX 113896634 113896939 -52753357 + MT2A LTR ERVL 230 532 -1 5 1453 2158 198 39 5 chrX 113897234 113897641 -52752655 + MTC LTR MaLR 1 421 0 5 1453 292 188 42 0 chrX 113897871 113897967 -52752329 + (TAAA)n Simple_repeat Simple_repeat 3 102 0 5 1453 222 37 0 0 chrX 113898051 113898078 -52752218 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 1453 417 232 169 19 chrX 113898082 113898236 -52752060 + Lx3C LINE L1 6789 6965 -11 5 1453 1052 181 0 20 chrX 113898298 113898495 -52751801 + RMER17A2 LTR ERVK 1 193 -713 5 1453 384 77 0 0 chrX 113898497 113898549 -52751747 + (AGGGGG)n Simple_repeat Simple_repeat 1 52 0 5 1453 207 0 0 0 chrX 113899278 113899301 -52750995 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1453 416 141 0 25 chrX 113899642 113899674 -52750622 + polypyrimidine Low_complexity Low_complexity 49 80 0 5 1453 1473 61 0 0 chrX 113899674 113900034 -52750262 + (TTTC)n Simple_repeat Simple_repeat 1 360 0 5 1453 416 141 0 25 chrX 113900034 113900080 -52750216 + polypyrimidine Low_complexity Low_complexity 4 48 0 5 1453 386 279 105 14 chrX 113900092 113900460 -52749836 - L1M2 LINE L1 -805 5486 5080 5 1454 1266 296 107 35 chrX 113901672 113902969 -52747327 - Lx8 LINE L1 -1035 6438 5013 5 1454 198 0 0 0 chrX 113903028 113903050 -52747246 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 5 1454 602 136 7 1 chrX 113903090 113903191 -52747105 - RMER16-int LTR ERVK -4133 1273 1183 5 1454 24 0 0 29 chrX 113903191 113903206 -52747090 + AT_rich Low_complexity Low_complexity 1 15 0 5 1454 1154 55 0 0 chrX 113903206 113903352 -52746944 - B1_Mm SINE Alu 0 147 2 5 1454 24 0 0 29 chrX 113903352 113903371 -52746925 + AT_rich Low_complexity Low_complexity 1 19 0 5 1454 328 288 0 39 chrX 113903376 113903506 -52746790 - L1M2 LINE L1 -1429 4711 4587 5 1454 1325 77 5 33 chrX 113903912 113904127 -52746169 + L1Md_F2 LINE L1 6374 6582 0 5 1454 721 51 0 10 chrX 113904128 113904227 -52746069 + ORR1A1-int LTR MaLR 1695 1792 0 5 1454 2754 49 3 3 chrX 113904227 113904573 -52745723 + ORR1A1 LTR MaLR 1 346 0 5 1454 2564 238 41 21 chrX 113904573 113905226 -52745070 - Lx5 LINE L1 -658 6392 5722 5 1454 6960 131 21 7 chrX 113905339 113907201 -52743095 - L1_Mus3 LINE L1 -9 6629 4748 5 1454 4317 121 10 3 chrX 113907199 113907888 -52742408 + L1_Mus3 LINE L1 3947 4640 -1243 5 1454 8665 205 25 32 chrX 113907970 113910053 -52740243 - Lx5 LINE L1 -161 5716 3649 5 1454 1285 241 33 3 chrX 113910058 113910358 -52739938 - Lx2B LINE L1 -8 6992 6684 5 1454 2449 216 34 13 chrX 113910356 113910881 -52739415 - L1_Mur2 LINE L1 -34 5852 5317 5 1454 3488 189 17 0 chrX 113910884 113911582 -52738714 - L1_Mur2 LINE L1 -1323 4554 3845 5 1454 565 191 179 0 chrX 113911785 113911953 -52738343 + Lx9 LINE L1 7268 7465 -179 5 1454 183 80 0 0 chrX 113911956 113911981 -52738315 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 1454 25 31 0 0 chrX 113912319 113912351 -52737945 + AT_rich Low_complexity Low_complexity 1 32 0 5 1454 13354 61 14 2 chrX 113913203 113915663 -52734633 - L1Md_F2 LINE L1 -5 6577 4082 5 1454 4961 92 1 3 chrX 113915661 113916360 -52733936 + L1_Mm LINE L1 2894 3591 -2292 5 1454 1304 58 0 0 chrX 113916360 113916515 -52733781 + B2_Mm1a SINE B2 2 156 -37 5 1454 315 0 0 0 chrX 113916515 113916550 -52733746 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 5 1454 1304 58 0 0 chrX 113916550 113916567 -52733729 + B2_Mm1a SINE B2 157 173 -20 5 1454 3974 70 0 0 chrX 113916567 113917094 -52733202 + L1_Mm LINE L1 3577 4103 -1780 5 1454 479 314 52 6 chrX 113917544 113917717 -52732579 - MLT1D LTR MaLR -272 233 53 5 1454 24 0 0 0 chrX 113918014 113918038 -52732258 + AT_rich Low_complexity Low_complexity 1 24 0 5 1454 2575 114 22 17 chrX 113918127 113918539 -52731757 + RLTR9F LTR ERVK 1 414 -1 5 1454 1387 165 42 73 chrX 113918726 113919013 -52731283 - ORR1A4 LTR MaLR -51 278 1 5 1454 2296 197 64 142 chrX 113919013 113919701 -52730595 - ORR1A4-int LTR MaLR 0 1963 1330 5 1454 1537 146 18 0 chrX 113919673 113919948 -52730348 + ORR1A3-int LTR MaLR 932 1211 -752 5 1454 476 254 0 0 chrX 113920474 113920604 -52729692 - Lx7 LINE L1 -1 7695 7566 5 1454 592 284 108 19 chrX 113920963 113921175 -52729121 + RMER1C Other Other 422 652 -690 5 1454 2346 206 104 24 chrX 113921178 113921868 -52728428 - RMER6C LTR ERVK -4 752 1 5 1454 225 283 0 0 chrX 113921878 113921931 -52728365 + L1_Mur3 LINE L1 2901 2953 -2927 5 1454 243 257 111 7 chrX 113922154 113922307 -52727989 + L1M4 LINE L1 3141 3309 -2837 5 1454 38 22 0 0 chrX 113922329 113922374 -52727922 + AT_rich Low_complexity Low_complexity 1 45 0 5 1454 2108 176 26 14 chrX 113922374 113922796 -52727500 - Lx2B LINE L1 -910 6090 5664 5 1454 2461 215 141 93 chrX 113922828 113923588 -52726708 - RMER19B LTR ERVK -106 796 1 5 1454 1518 241 53 11 chrX 113923593 113923971 -52726325 + Lx2B LINE L1 6493 6886 -114 5 1454 23 33 0 0 chrX 113923993 113924023 -52726273 + AT_rich Low_complexity Low_complexity 1 30 0 5 1454 285 265 67 22 chrX 113924079 113924214 -52726082 + L1MC LINE L1 3425 3565 -2581 5 1454 1124 283 63 13 chrX 113924250 113924777 -52725519 + L1_Mur3 LINE L1 3630 4182 -1698 5 1454 1965 201 29 31 chrX 113925261 113925899 -52724397 + Lx4B LINE L1 919 1559 -4318 5 1454 1491 100 13 4 chrX 113925899 113926130 -52724166 + L1_Mus3 LINE L1 6406 6638 0 5 1454 1965 185 30 49 chrX 113926130 113926302 -52723994 + Lx4B LINE L1 1560 1727 -4150 5 1454 1612 159 40 28 chrX 113926303 113926626 -52723670 + ORR1A2 LTR MaLR 1 327 0 5 1454 1461 150 36 8 chrX 113926626 113926924 -52723372 + ORR1A2-int LTR MaLR 1 290 -1290 5 1454 858 133 0 0 chrX 113926985 113927113 -52723183 + ORR1A2 LTR MaLR 199 326 0 5 1454 18432 186 28 48 chrX 113927113 113927441 -52722855 + Lx4B LINE L1 1724 2043 -3834 5 1454 1600 46 18 31 chrX 113927441 113927597 -52722699 + L1Md_F3 LINE L1 6360 6516 -68 5 1454 2975 18 0 0 chrX 113927597 113927929 -52722367 - IAPEY3_LTR LTR ERVK 0 332 1 5 1454 1600 46 18 31 chrX 113927929 113927996 -52722300 + L1Md_F3 LINE L1 6517 6580 -4 5 1454 18432 186 28 47 chrX 113927996 113931974 -52718322 + Lx4B LINE L1 2044 5965 -1093 5 1454 2743 44 15 0 chrX 113931974 113932256 -52718040 + ORR1A0 LTR MaLR 1 282 -64 5 1454 207 0 0 0 chrX 113932256 113932279 -52718017 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1454 2743 44 15 0 chrX 113932279 113932337 -52717959 + ORR1A0 LTR MaLR 283 345 -1 5 1454 2794 223 76 7 chrX 113932337 113932668 -52717628 + Lx4B LINE L1 5966 6307 -751 5 1454 2534 96 175 15 chrX 113932737 113933193 -52717103 - RMER17A2 LTR ERVK -376 530 2 5 1454 25 51 0 0 chrX 113933947 113933986 -52716310 + AT_rich Low_complexity Low_complexity 1 39 0 5 1454 1503 183 204 51 chrX 113934385 113934950 -52715346 + L1_Mus2 LINE L1 5916 6566 0 5 1454 5457 79 6 0 chrX 113935027 113935749 -52714547 - L1_Mus3 LINE L1 0 6638 5913 5 1454 3365 98 20 8 chrX 113935749 113936303 -52713993 + L1_Mus3 LINE L1 5368 5930 -708 5 1454 37180 46 4 1 chrX 113936310 113940906 -52709390 - L1Md_F2 LINE L1 -1 6584 1981 5 1454 249 33 0 0 chrX 113940906 113940936 -52709360 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1454 37180 57 2 0 chrX 113940936 113941777 -52708519 - L1Md_F2 LINE L1 -3906 1980 993 5 1454 5127 109 5 3 chrX 113941744 113942506 -52707790 - L1Md_F2 LINE L1 -5521 1206 443 5 1454 1009 224 0 0 chrX 113942876 113943086 -52707210 - L1_Mur2 LINE L1 -264 5613 5404 5 1454 1245 288 22 6 chrX 113944103 113944466 -52705830 - ORR1D2 LTR MaLR -1 369 1 5 1454 189 0 0 0 chrX 113944486 113944507 -52705789 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 5 1454 529 0 0 58 chrX 113945101 113945187 -52705109 + (CAAAAA)n Simple_repeat Simple_repeat 2 82 0 5 1454 2958 84 2 70 chrX 113946025 113946506 -52703790 - L1_Mus2 LINE L1 0 6566 6134 5 1454 1720 198 38 8 chrX 113946935 113947306 -52702990 + Lx4B LINE L1 6669 7050 -8 5 1454 522 114 0 0 chrX 113947325 113947404 -52702892 + (TA)n Simple_repeat Simple_repeat 1 79 0 5 1454 242 240 0 0 chrX 113947953 113948003 -52702293 + RMER30 DNA MER1_type 2 51 -151 5 1454 24 53 0 0 chrX 113948121 113948159 -52702137 + AT_rich Low_complexity Low_complexity 1 38 0 5 1454 465 114 0 0 chrX 113948173 113948243 -52702053 + Lx9 LINE L1 7323 7392 -252 5 1454 1216 231 129 13 chrX 113948509 113948882 -52701414 + MTD LTR MaLR 1 416 -3 5 1454 39 60 0 0 chrX 113949586 113949653 -52700643 + AT_rich Low_complexity Low_complexity 1 67 0 5 1454 286 406 15 0 chrX 113949662 113949795 -52700501 + MLT2B4 LTR ERVL 129 263 -293 5 1454 1340 102 0 5 chrX 113949891 113950098 -52700198 - L1_Mus4 LINE L1 0 6636 6431 5 1454 630 65 47 0 chrX 113950110 113950217 -52700079 + (TCTA)n Simple_repeat Simple_repeat 3 114 0 5 1454 1707 148 97 13 chrX 113950314 113950623 -52699673 + Lx4A LINE L1 6722 7056 -2 6 1454 224 114 0 43 chrX 113950623 113950669 -52699627 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 6 1454 463 314 86 115 chrX 113950878 113951216 -52699080 - MER44A DNA MER2_type -4 335 8 6 1454 10204 171 31 13 chrX 113951738 113954911 -52695385 - Lx2 LINE L1 -1 6996 3792 6 1454 1062 173 84 0 chrX 113954915 113955106 -52695190 - Lx3B LINE L1 -335 6638 6432 6 1454 1126 308 62 64 chrX 113955479 113955989 -52694307 + RLTR18B LTR ERVK 3 490 -126 6 1454 3909 139 33 44 chrX 113955989 113956353 -52693943 - RLTR19B LTR ERVK 0 715 332 6 1454 314 23 23 0 chrX 113956353 113956396 -52693900 + (CAA)n Simple_repeat Simple_repeat 2 45 0 6 1454 3909 139 33 44 chrX 113956396 113956752 -52693544 - RLTR19B LTR ERVK -384 331 3 6 1454 1126 289 60 29 chrX 113956752 113956871 -52693425 + RLTR18B LTR ERVK 383 502 -10 6 1454 23 0 0 0 chrX 113957680 113957703 -52692593 + AT_rich Low_complexity Low_complexity 1 23 0 6 1454 22 0 0 0 chrX 113957817 113957839 -52692457 + AT_rich Low_complexity Low_complexity 1 22 0 6 1454 392 294 18 0 chrX 113957871 113957980 -52692316 + PB1D9 SINE Alu 3 113 -7 6 1454 21 0 0 0 chrX 113958039 113958060 -52692236 + AT_rich Low_complexity Low_complexity 1 21 0 6 1454 26 64 0 0 chrX 113958250 113958297 -52691999 + AT_rich Low_complexity Low_complexity 1 47 0 6 1454 31 0 0 0 chrX 113959393 113959424 -52690872 + AT_rich Low_complexity Low_complexity 1 31 0 6 1454 31 68 0 0 chrX 113959544 113959603 -52690693 + AT_rich Low_complexity Low_complexity 1 59 0 6 1454 7053 121 19 11 chrX 113959717 113960851 -52689445 + Lx3A LINE L1 5830 6972 -9 6 1454 23 0 0 0 chrX 113960854 113960877 -52689419 + AT_rich Low_complexity Low_complexity 1 23 0 6 1454 25 31 0 0 chrX 113960940 113960972 -52689324 + AT_rich Low_complexity Low_complexity 1 32 0 6 1454 28 91 0 0 chrX 113961367 113961444 -52688852 + AT_rich Low_complexity Low_complexity 1 77 0 6 1454 24 0 0 0 chrX 113961750 113961774 -52688522 + AT_rich Low_complexity Low_complexity 1 24 0 6 1454 1123 281 108 47 chrX 113962623 113963287 -52687009 - L1MD1 LINE L1 -163 6079 5375 6 1454 357 208 206 10 chrX 113963342 113963439 -52686857 + ORR1D2 LTR MaLR 7 122 -237 6 1454 287 216 78 22 chrX 113963473 113963563 -52686733 - ORR1C2 LTR MaLR -139 245 145 6 1454 591 232 109 33 chrX 113963576 113963759 -52686537 + ORR1D2 LTR MaLR 174 370 0 6 1454 797 200 76 71 chrX 113964011 113964221 -52686075 - ORR1C2 LTR MaLR 0 384 174 6 1454 537 144 0 0 chrX 113964221 113964339 -52685957 + (GA)n Simple_repeat Simple_repeat 1 118 0 6 1454 261 269 0 0 chrX 113964367 113964419 -52685877 - ORR1C2 LTR MaLR -204 180 129 6 1454 1482 27 21 21 chrX 113964422 113964613 -52685683 + L1Md_F3 LINE L1 5945 6135 -449 6 1454 401 254 28 46 chrX 113964644 113964774 -52685522 - ORR1C2 LTR MaLR -276 118 1 6 1454 1134 211 52 122 chrX 113964856 113965256 -52685040 - ORR1D1 LTR MaLR 0 374 3 6 1454 1104 286 74 34 chrX 113966246 113966691 -52683605 + RMER5 LTR ERV1 50 512 -22 6 1454 205 179 0 51 chrX 113969208 113969267 -52681029 + A-rich Low_complexity Low_complexity 3 58 0 6 1454 246 231 30 30 chrX 113969824 113969891 -52680405 + RLTR23 LTR ERV1 331 397 -33 6 1454 1046 144 6 0 chrX 113970549 113970722 -52679574 - ORR1B1-int LTR MaLR -1788 175 2 6 1454 1610 194 16 67 chrX 113970723 113971094 -52679202 - ORR1B1 LTR MaLR 0 394 43 6 1454 253 77 0 55 chrX 113971246 113971301 -52678995 + (TTTTTG)n Simple_repeat Simple_repeat 3 54 0 6 1454 195 234 20 60 chrX 113971458 113971508 -52678788 - L4 LINE RTE -196 1833 1786 6 1454 285 98 0 0 chrX 113974276 113974317 -52675979 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1454 213 342 74 0 chrX 113976477 113976602 -52673694 + MIRb SINE MIR 50 180 -88 6 1454 220 271 103 23 chrX 113977071 113977158 -52673138 + B1_Mus1 SINE Alu 28 121 -27 6 1454 1883 94 0 0 chrX 113977753 113978009 -52672287 - L1_Mus1 LINE L1 0 6567 6312 6 1454 935 328 50 18 chrX 113978926 113979267 -52671029 + MTE2b LTR MaLR 10 361 -18 6 1454 205 29 59 0 chrX 113979305 113979339 -52670957 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 6 1454 330 197 0 0 chrX 113979398 113979459 -52670837 + LSU-rRNA_Hsa rRNA rRNA 1777 1837 -3198 6 1454 566 121 20 0 chrX 113979459 113979558 -52670738 + RMER6-int LTR ERVK 2579 2679 -498 6 1454 1093 161 128 5 chrX 113979555 113979774 -52670522 + RMER6-int LTR ERVK 2900 3145 -32 6 1454 2746 169 86 51 chrX 113979816 113979920 -52670376 + RMER6C LTR ERVK 4 109 -581 6 1454 450 0 0 0 chrX 113979920 113979970 -52670326 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1454 2746 169 86 51 chrX 113979970 113980528 -52669768 + RMER6C LTR ERVK 110 689 -1 6 1454 6048 191 32 9 chrX 113980718 113981502 -52668794 + L1VL4 LINE L1 433 1233 -2326 6 1454 444 19 0 0 chrX 113981502 113981555 -52668741 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 1454 6048 174 24 4 chrX 113981555 113982038 -52668258 + L1VL4 LINE L1 1234 1728 -1831 6 1454 269 51 26 0 chrX 113982038 113982077 -52668219 + (CAA)n Simple_repeat Simple_repeat 2 41 0 6 1454 6048 174 24 4 chrX 113982077 113982414 -52667882 + L1VL4 LINE L1 1729 2075 -1484 6 1454 1034 204 5 0 chrX 113982412 113982618 -52667678 - L1_Mur2 LINE L1 -1703 4174 3968 6 1454 222 37 0 0 chrX 113982618 113982645 -52667651 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 6 1454 782 198 76 38 chrX 113982647 113982883 -52667413 - Lx3_Mus LINE L1 -53 6956 6712 6 1454 6984 158 85 11 chrX 113982901 113984208 -52666088 + Lx2B LINE L1 5592 6995 -5 6 1454 29 0 0 0 chrX 113985113 113985142 -52665154 + AT_rich Low_complexity Low_complexity 1 29 0 6 1454 296 375 17 6 chrX 113985177 113985354 -52664942 - B3A SINE B2 -19 179 1 6 1454 307 0 0 0 chrX 113985428 113985464 -52664832 + U2 snRNA snRNA 1 36 -152 6 1454 1184 282 118 6 chrX 113985517 113985881 -52664415 - MTD LTR MaLR -14 405 1 6 1454 794 11 11 0 chrX 113985910 113986005 -52664291 + (TCTA)n Simple_repeat Simple_repeat 3 98 0 6 1454 393 22 0 0 chrX 113986248 113986294 -52664002 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1454 236 30 0 29 chrX 113986756 113986790 -52663506 + (TAGA)n Simple_repeat Simple_repeat 2 34 0 6 1454 414 0 0 0 chrX 113986790 113986836 -52663460 + (TATG)n Simple_repeat Simple_repeat 2 47 0 6 1454 263 370 34 20 chrX 113987323 113987470 -52662826 + LTR82A LTR ERVL 359 507 -365 6 1454 228 263 66 0 chrX 113987470 113987546 -52662750 + MLT2B3 LTR ERVL 1 81 -434 6 1454 392 358 36 0 chrX 113987579 113987716 -52662580 - RSINE1 SINE B4 -21 144 3 6 1454 346 389 33 13 chrX 113987744 113987895 -52662401 + ORR1E LTR MaLR 39 192 -167 6 1454 273 371 8 8 chrX 113987914 113988031 -52662265 + ORR1E LTR MaLR 255 371 -8 6 1454 748 383 44 32 chrX 113988043 113988475 -52661821 + MLT2B3 LTR ERVL 94 530 -24 6 1454 1193 141 53 0 chrX 113988938 113989144 -52661152 - Lx2 LINE L1 -6 6991 6775 6 1454 4462 152 15 10 chrX 113989144 113989923 -52660373 - Lx2 LINE L1 -354 6643 5861 6 1454 539 209 9 0 chrX 113990367 113990477 -52659819 + Lx9 LINE L1 6978 7088 -556 6 1454 198 0 0 0 chrX 113991080 113991102 -52659194 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1454 216 0 0 0 chrX 113991435 113991459 -52658837 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1454 767 311 82 30 chrX 113991771 113992172 -52658124 - Lx9 LINE L1 -137 7507 7086 6 1454 22 43 0 21 chrX 113992259 113992294 -52658002 + AT_rich Low_complexity Low_complexity 1 35 0 6 1454 883 107 25 6 chrX 113992294 113992454 -52657842 + L1_Mus4 LINE L1 6471 6633 -3 6 1454 22 43 0 21 chrX 113992454 113992465 -52657831 + AT_rich Low_complexity Low_complexity 1 11 0 6 1454 637 143 0 8 chrX 113992811 113992938 -52657358 + L1_Mus4 LINE L1 6471 6596 -40 6 1454 310 207 35 0 chrX 113993046 113993104 -52657192 - PB1D7 SINE Alu -60 60 1 6 1454 797 297 49 46 chrX 113993631 113993938 -52656358 + MTE2b LTR MaLR 67 374 -5 6 1454 12578 149 92 22 chrX 113993940 113997706 -52652590 + Lx3_Mus LINE L1 10 4615 -1268 6 1454 979 123 0 14 chrX 113997706 113997854 -52652442 - B1_Mus1 SINE Alu -1 147 2 6 1454 9990 222 237 36 chrX 113997854 113998481 -52651815 + Lx3_Mus LINE L1 4616 5225 -658 6 1454 435 19 0 0 chrX 113998481 113998533 -52651763 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 1454 9990 222 237 36 chrX 113998533 113998580 -52651716 + Lx3_Mus LINE L1 5226 5273 -610 6 1454 207 0 0 0 chrX 113998580 113998603 -52651693 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 6 1454 9990 175 114 32 chrX 113998603 113999254 -52651042 + Lx3_Mus LINE L1 5274 5914 -1095 6 1454 1588 98 15 27 chrX 113999471 113999732 -52650564 + Lx3_Mus LINE L1 6714 6971 -10 6 1454 1187 296 32 16 chrX 114001005 114001321 -52648975 - MTE2b LTR MaLR -54 325 5 1 1454 505 364 33 114 chrX 114001466 114001915 -52648381 - MLT1F-int LTR MaLR -197 1292 880 2 1454 240 333 110 28 chrX 114002279 114002461 -52647835 - MLT1F-int LTR MaLR -692 797 601 2 1454 732 103 0 0 chrX 114002521 114002628 -52647668 + (TTTC)n Simple_repeat Simple_repeat 4 110 0 3 1454 22 0 0 0 chrX 114002851 114002873 -52647423 + AT_rich Low_complexity Low_complexity 1 22 0 4 1454 207 0 0 0 chrX 114004028 114004051 -52646245 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1454 1134 307 59 44 chrX 114005089 114005611 -52644685 + RMER5 LTR ERV1 1 530 -4 6 1454 222 209 0 0 chrX 114005944 114005987 -52644309 + (CACCAT)n Simple_repeat Simple_repeat 5 47 0 7 1454 241 265 0 46 chrX 114006140 114006227 -52644069 - Lx8 LINE L1 -1571 5902 5820 8 1454 26 0 0 0 chrX 114006849 114006875 -52643421 + AT_rich Low_complexity Low_complexity 1 26 0 9 1454 415 293 39 91 chrX 114006924 114007078 -52643218 - B1_Mur2 SINE Alu -2 147 2 1 1454 816 20 0 0 chrX 114007119 114007217 -52643079 + (TG)n Simple_repeat Simple_repeat 1 98 0 1 1454 9025 229 85 7 chrX 114007750 114008147 -52642149 + L1_Mur2 LINE L1 820 1296 -4581 1 1454 349 36 18 18 chrX 114008147 114008203 -52642093 + (CAA)n Simple_repeat Simple_repeat 2 57 0 1 1454 9025 194 48 28 chrX 114008203 114008948 -52641348 + L1_Mur2 LINE L1 1297 2053 -3824 1 1454 447 19 0 0 chrX 114008948 114009000 -52641296 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1454 9025 200 50 33 chrX 114009000 114010515 -52639781 + L1_Mur2 LINE L1 2054 3565 -2321 1 1454 264 30 0 0 chrX 114010515 114010548 -52639748 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1454 7391 266 81 87 chrX 114010548 114012181 -52638115 + L1_Mur2 LINE L1 3566 5166 -720 1 1454 4411 124 20 13 chrX 114012181 114012892 -52637404 - L1_Mus4 LINE L1 -3 6633 5918 1 1454 7391 266 81 87 chrX 114012892 114013604 -52636692 + L1_Mur2 LINE L1 5167 5885 -1 1 1454 7073 203 28 142 chrX 114014031 114015103 -52635193 + Lx5 LINE L1 3519 4624 -1253 1 1454 198 0 0 0 chrX 114015103 114015125 -52635171 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1 1454 7084 210 21 90 chrX 114015125 114017865 -52632431 + Lx5 LINE L1 4625 7035 -15 1 1454 252 86 0 0 chrX 114017866 114017901 -52632395 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 1 1454 226 222 22 0 chrX 114018614 114018659 -52631637 + ORR1C2 LTR MaLR 1 46 -375 2 1454 1212 193 138 68 chrX 114018661 114018839 -52631457 + ORR1C2 LTR MaLR 1 190 -194 2 1454 411 21 0 0 chrX 114018839 114018887 -52631409 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 1454 1212 193 138 68 chrX 114018887 114019063 -52631233 + ORR1C2 LTR MaLR 191 379 -5 2 1454 2515 276 90 54 chrX 114019067 114020390 -52629906 + ORR1C2-int LTR MaLR 1 1370 0 2 1454 5897 130 14 25 chrX 114020414 114021379 -52628917 + RMER17B LTR ERVK 1 954 -4 2 1454 1202 229 60 0 chrX 114021384 114021650 -52628646 + ORR1C2 LTR MaLR 35 316 -68 2 1454 1368 295 10 34 chrX 114021665 114022051 -52628245 + MTD LTR MaLR 43 419 0 2 1454 455 322 52 38 chrX 114022051 114022264 -52628032 - Lx8 LINE L1 -176 7297 7082 2 1454 1071 284 32 0 chrX 114022367 114022645 -52627651 + MTD LTR MaLR 3 289 -130 2 1454 1806 234 112 18 chrX 114022657 114023158 -52627138 - RLTR12A LTR ERVK -18 550 3 2 1454 467 261 0 12 chrX 114023158 114023270 -52627026 + MTD LTR MaLR 289 406 -13 2 1454 894 354 13 13 chrX 114024458 114024759 -52625537 + RCHARR1 DNA MER1_type 4 304 -670 2 1454 965 278 66 22 chrX 114024753 114025117 -52625179 + RCHARR1 DNA MER1_type 412 791 -183 2 1454 1435 138 52 4 chrX 114025141 114025389 -52624907 + Lx LINE L1 6366 6625 -29 2 1454 1777 158 20 12 chrX 114025378 114025723 -52624573 + Lx3_Mus LINE L1 5972 6319 -690 3 1454 1667 140 15 0 chrX 114025725 114025990 -52624306 + Lx3_Mus LINE L1 6726 6994 -15 3 1454 313 79 0 0 chrX 114025991 114026029 -52624267 + L1Md_F2 LINE L1 5548 5585 -298 3 1454 7796 60 2 2 chrX 114026030 114027010 -52623286 + L1Md_F2 LINE L1 5587 6566 -16 3 1454 29 60 0 0 chrX 114027010 114027060 -52623236 + AT_rich Low_complexity Low_complexity 1 50 0 3 1454 363 167 184 53 chrX 114027074 114027188 -52623108 + RCHARR1 DNA MER1_type 839 967 -7 2 1454 43 71 0 0 chrX 114027194 114027279 -52623017 + AT_rich Low_complexity Low_complexity 1 85 0 3 1454 243 0 0 0 chrX 114027676 114027703 -52622593 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1454 1051 109 0 0 chrX 114027703 114027841 -52622455 - B1_Mus1 SINE Alu -9 139 2 3 1454 25 75 0 0 chrX 114028150 114028203 -52622093 + AT_rich Low_complexity Low_complexity 1 53 0 3 1454 252 288 123 25 chrX 114028690 114028893 -52621403 - L1MA7 LINE L1 -17 6274 6052 3 1454 22 35 0 0 chrX 114028922 114028951 -52621345 + AT_rich Low_complexity Low_complexity 1 29 0 3 181 32436 94 7 8 chrX 114029055 114035451 -52614845 - L1Md_F2 LINE L1 -11 6571 183 3 1455 429 36 0 0 chrX 114035950 114036005 -52614291 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 4 1455 255 309 12 12 chrX 114036066 114036148 -52614148 - Lx7 LINE L1 -555 7141 7060 4 1455 1507 216 189 64 chrX 114036154 114036766 -52613530 - RMER6C LTR ERVK 0 690 2 4 1455 536 363 61 66 chrX 114036866 114037488 -52612808 - Lx8 LINE L1 -557 6916 6298 4 1455 21 95 0 0 chrX 114037505 114037568 -52612728 + AT_rich Low_complexity Low_complexity 1 63 0 4 1455 318 106 0 0 chrX 114037735 114037782 -52612514 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 1455 364 348 8 17 chrX 114037804 114037921 -52612375 - B4 SINE B4 -10 282 167 4 1455 254 238 29 73 chrX 114037974 114038042 -52612254 - B4 SINE B4 -227 65 1 4 1455 229 279 0 14 chrX 114038065 114038134 -52612162 + CT-rich Low_complexity Low_complexity 1 68 0 4 1455 4819 120 8 20 chrX 114038143 114038312 -52611984 - L1Md_F2 LINE L1 -14 6568 6410 4 1455 2324 113 5 75 chrX 114038312 114038696 -52611600 - RLTR10D LTR ERVK 0 359 3 5 1455 4819 120 8 20 chrX 114038696 114039281 -52611015 - L1Md_F2 LINE L1 -173 6409 5823 4 1455 29176 117 14 2 chrX 114039281 114044024 -52606272 - L1_Mus2 LINE L1 -481 6085 1292 5 1455 14986 138 83 3 chrX 114044053 114047759 -52602537 - L1Md_F2 LINE L1 0 6582 2555 5 1455 5344 129 2 69 chrX 114047756 114048694 -52601602 - L1_Mus2 LINE L1 -5458 1158 284 5 1455 8052 96 3 2 chrX 114048692 114049838 -52600458 - L1VL1 LINE L1 -5332 1306 217 5 1455 298 115 16 16 chrX 114049974 114050036 -52600260 + (TC)n Simple_repeat Simple_repeat 1 62 0 5 1455 519 144 0 0 chrX 114050061 114050136 -52600160 + (TCC)n Simple_repeat Simple_repeat 2 76 0 5 1455 1335 62 0 0 chrX 114050136 114050314 -52599982 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 5 1455 519 144 0 0 chrX 114050314 114050328 -52599968 + (TCC)n Simple_repeat Simple_repeat 3 16 0 5 1455 7906 56 5 0 chrX 114050684 114051683 -52598613 - L1Md_F2 LINE L1 -73 5810 4807 5 1455 5748 64 3 8 chrX 114051683 114052440 -52597856 + L1Md_F2 LINE L1 5830 6582 0 5 1455 486 0 0 0 chrX 114052503 114052557 -52597739 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 1455 318 67 0 0 chrX 114052667 114052712 -52597584 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1455 411 328 20 24 chrX 114053926 114054095 -52596201 + MTEa LTR MaLR 1 164 -215 6 1455 420 20 0 0 chrX 114054361 114054410 -52595886 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1455 228 301 222 61 chrX 114054685 114054897 -52595399 - MLT2B2 LTR ERVL -244 271 26 6 1455 1403 226 57 22 chrX 114055396 114055763 -52594533 - ORR1C2 LTR MaLR -2 382 3 6 1455 198 0 0 0 chrX 114055792 114055814 -52594482 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1455 414 0 0 0 chrX 114055970 114056016 -52594280 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1455 2095 276 62 8 chrX 114056347 114056965 -52593331 + Lx9 LINE L1 6178 6828 -816 6 1455 577 239 43 40 chrX 114057011 114057264 -52593032 + Lx9 LINE L1 7389 7642 -2 6 1455 536 274 154 37 chrX 114057489 114057762 -52592534 + MLT2C1 LTR ERVL 28 332 -65 6 1455 278 258 32 43 chrX 114057947 114058040 -52592256 - ORR1B2 LTR MaLR -244 123 32 6 1455 342 282 56 75 chrX 114058122 114058283 -52592013 + MLT2C2 LTR ERVL 259 416 -48 7 1455 213 189 19 19 chrX 114058501 114058555 -52591741 + CT-rich Low_complexity Low_complexity 2 55 0 7 1455 284 282 115 41 chrX 114058576 114058698 -52591598 - RMER15 LTR ERVL -122 453 323 7 1455 186 133 0 0 chrX 114058755 114058785 -52591511 + (TTTC)n Simple_repeat Simple_repeat 1 30 0 7 1455 251 316 71 7 chrX 114058785 114058925 -52591371 - B1F1 SINE Alu 0 149 1 7 1455 231 355 42 16 chrX 114060007 114060196 -52590100 - L1MEc LINE L1 -4494 1906 1713 7 1455 19476 194 32 35 chrX 114061023 114065921 -52584375 - Lx LINE L1 -997 5657 800 7 1455 330 324 40 36 chrX 114066226 114066476 -52583820 - L1M4b LINE L1 -3187 3819 3569 7 1455 326 288 57 98 chrX 114066553 114066888 -52583408 - L1M4b LINE L1 -3571 3435 3115 7 1455 35 83 0 0 chrX 114066998 114067082 -52583214 + AT_rich Low_complexity Low_complexity 1 84 0 7 1455 370 260 112 50 chrX 114067611 114067870 -52582426 - L1M4b LINE L1 -4432 2902 2628 7 1455 390 115 0 0 chrX 114068355 114068416 -52581880 + (TA)n Simple_repeat Simple_repeat 1 61 0 7 1455 21 36 0 0 chrX 114069020 114069048 -52581248 + AT_rich Low_complexity Low_complexity 1 28 0 8 1455 1652 192 3 0 chrX 114069051 114069353 -52580943 + Lx4A LINE L1 6190 6492 -566 8 1455 23 54 0 0 chrX 114070132 114070169 -52580127 + AT_rich Low_complexity Low_complexity 1 37 0 8 1455 215 156 22 0 chrX 114072276 114072321 -52577975 + A-rich Low_complexity Low_complexity 2 47 0 8 1455 846 322 75 14 chrX 114073255 114073671 -52576625 - Lx8 LINE L1 -254 7219 6779 8 1455 201 143 48 0 chrX 114073981 114074023 -52576273 + T-rich Low_complexity Low_complexity 3 46 0 8 1455 313 341 50 50 chrX 114074033 114074255 -52576041 - Lx8 LINE L1 -6 7467 7246 8 1455 1611 294 10 12 chrX 114074304 114074711 -52575585 - MTD LTR MaLR 0 419 14 8 1455 286 284 156 10 chrX 114074875 114074903 -52575393 - B3 SINE B2 -6 210 183 8 1455 540 45 0 0 chrX 114074903 114074970 -52575326 + (TATG)n Simple_repeat Simple_repeat 4 70 0 8 1455 395 296 106 5 chrX 114074970 114075114 -52575182 - B3A SINE B2 -34 182 18 8 1455 1461 318 41 8 chrX 114075125 114075642 -52574654 - Lx8 LINE L1 -340 7133 6600 8 1455 2127 125 0 58 chrX 114075740 114076087 -52574209 - ORR1A2 LTR MaLR 0 327 1 9 1455 398 289 97 14 chrX 114076463 114076607 -52573689 - Lx8 LINE L1 -899 6574 6419 8 1455 314 294 0 0 chrX 114077153 114077221 -52573075 - ID4 SINE ID -13 70 3 9 1455 294 310 91 11 chrX 114077676 114077764 -52572532 + B1F1 SINE Alu 17 111 -38 9 1455 1995 204 39 25 chrX 114078732 114079139 -52571157 + MTC LTR MaLR 1 413 -8 9 1455 4186 142 53 10 chrX 114079311 114080081 -52570215 - RMER17D2 LTR ERVK -2 807 5 9 1455 688 278 81 31 chrX 114080342 114080602 -52569694 + LTRIS4 LTR ERV1 235 507 0 9 1455 1756 259 109 142 chrX 114080604 114081287 -52569009 + MuRRS4-int LTR ERV1 5 686 -4377 9 1455 1078 61 0 0 chrX 114081287 114081418 -52568878 + B1_Mm SINE Alu 1 131 -16 9 1455 1756 259 109 142 chrX 114081418 114081489 -52568807 + MuRRS4-int LTR ERV1 687 768 -4295 9 1455 846 81 0 0 chrX 114081489 114081613 -52568683 - L1_Mm LINE L1 -4391 1492 1369 9 1455 1756 259 109 142 chrX 114081613 114082039 -52568257 + MuRRS4-int LTR ERV1 769 1264 -3799 9 1455 7641 55 10 20 chrX 114082050 114083106 -52567190 + L1_Mm LINE L1 1478 2523 -3360 9 1455 1758 65 0 0 chrX 114083106 114083335 -52566961 + L1Md_F3 LINE L1 6340 6568 -16 9 1455 902 317 86 30 chrX 114083359 114083792 -52566504 + MuRRS4-int LTR ERV1 3820 4276 -787 9 1455 912 203 30 0 chrX 114083798 114083995 -52566301 + MuRRS4-int LTR ERV1 4819 5021 -42 9 1455 659 281 52 26 chrX 114084257 114084487 -52565809 + LTRIS4 LTR ERV1 272 507 0 1 1455 297 51 0 0 chrX 114084500 114084539 -52565757 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1455 7482 78 2 2 chrX 114084581 114085868 -52564428 - L1Md_F2 LINE L1 -11 6571 5288 1 1455 31134 84 6 77 chrX 114085862 114092522 -52557774 - L1Md_T LINE L1 -3 6579 217 1 1455 6480 203 50 41 chrX 114092994 114093130 -52557166 - Lx4B LINE L1 -8 7050 6923 1 1455 208 53 26 26 chrX 114093130 114093169 -52557127 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1455 1060 102 7 0 chrX 114093174 114093321 -52556975 - B1_Mus1 SINE Alu 0 148 1 1 1455 6480 197 36 30 chrX 114093321 114094707 -52555589 - Lx4B LINE L1 -136 6922 5504 1 1455 198 71 0 0 chrX 114094829 114094857 -52555439 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 1 1455 1152 285 72 21 chrX 114094946 114095333 -52554963 + MTD LTR MaLR 1 407 -12 1 1455 2632 143 11 20 chrX 114095615 114096056 -52554240 + RLTR21 LTR ERVK 1 437 -1135 1 1455 539 147 103 0 chrX 114096056 114096112 -52554184 + Lx3B LINE L1 4804 4860 -1026 1 1455 510 17 0 0 chrX 114096112 114096171 -52554125 + (GAAA)n Simple_repeat Simple_repeat 3 61 0 1 1455 539 147 103 0 chrX 114096171 114096230 -52554066 + Lx3B LINE L1 4861 4929 -957 1 1455 415 103 0 0 chrX 114096229 114096287 -52554009 - L1_Mm LINE L1 -3672 2211 2154 1 1455 3760 66 0 2 chrX 114096285 114096771 -52553525 + L1Md_F2 LINE L1 5102 5586 -297 1 1455 7076 77 26 2 chrX 114096772 114097732 -52552564 + L1Md_F2 LINE L1 5588 6570 -12 1 1455 6377 164 25 17 chrX 114097732 114099397 -52550899 + Lx3B LINE L1 4918 7008 -1 1 1455 21 36 0 0 chrX 114099397 114099425 -52550871 + AT_rich Low_complexity Low_complexity 1 28 0 1 1455 1628 176 3 3 chrX 114099425 114099728 -52550568 + RLTR21 LTR ERVK 445 747 -825 1 1455 21 36 0 0 chrX 114099731 114099759 -52550537 + AT_rich Low_complexity Low_complexity 1 28 0 1 1455 33126 85 8 4 chrX 114099766 114106204 -52544092 - L1Md_F2 LINE L1 -16 6566 119 1 1455 1529 174 18 3 chrX 114106211 114106494 -52543802 + RLTR21 LTR ERVK 753 1039 -533 1 1455 546 209 8 50 chrX 114106511 114106632 -52543664 + RLTR21 LTR ERVK 1457 1572 0 1 1455 362 340 0 20 chrX 114106704 114106803 -52543493 + PB1D10 SINE Alu 13 109 -8 1 1455 297 0 0 0 chrX 114106940 114106973 -52543323 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1455 459 0 0 0 chrX 114106973 114107023 -52543273 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 1455 25 0 0 0 chrX 114107443 114107468 -52542828 + AT_rich Low_complexity Low_complexity 1 25 0 1 1455 2032 157 46 44 chrX 114107796 114108208 -52542088 - Lx LINE L1 -10 6644 6232 1 1455 7489 169 21 2 chrX 114108209 114109603 -52540693 + L1_Mm LINE L1 3929 5349 -534 1 1455 1390 217 25 34 chrX 114109724 114110081 -52540215 + Lx2A1 LINE L1 4891 5244 -636 1 1455 2288 247 65 42 chrX 114110118 114111039 -52539257 + L1_Mus1 LINE L1 256 1205 -5433 1 1455 28573 118 13 9 chrX 114111038 114116545 -52533751 + L1_Mus1 LINE L1 1073 6651 -3 1 1455 1577 247 34 24 chrX 114116558 114117023 -52533273 + Lx2A1 LINE L1 5247 5716 -164 1 1455 2582 116 12 29 chrX 114117023 114117433 -52532863 + RLTR9D LTR ERVK 1 403 0 1 1455 5671 287 30 23 chrX 114117435 114119617 -52530679 + ETnERV-int LTR ERVK 3 2131 -4036 1 1455 1076 205 128 36 chrX 114119617 114119921 -52530375 - IAPEY3_LTR LTR ERVK 0 332 1 1 1455 2348 327 65 49 chrX 114119921 114120783 -52529513 + ETnERV-int LTR ERVK 2132 3008 -3159 1 1455 2379 201 20 33 chrX 114120779 114121443 -52528853 + ETnERV2-int LTR ERVK 5813 6227 -1179 1 1455 2627 126 12 10 chrX 114121728 114122130 -52528166 + RLTR9D LTR ERVK 1 403 0 1 1455 372 206 98 35 chrX 114122130 114122363 -52527933 + Lx2A1 LINE L1 5711 6005 -1691 1 1455 634 91 55 0 chrX 114122363 114122473 -52527823 + L1_Mus4 LINE L1 6515 6630 -6 1 1455 360 229 241 52 chrX 114122473 114122529 -52527767 + Lx2A1 LINE L1 6006 6057 -1639 1 1455 6941 22 0 0 chrX 114122552 114123357 -52526939 + L1Md_T LINE L1 4782 5586 -297 1 1455 8382 35 0 0 chrX 114123357 114124352 -52525944 + L1Md_T LINE L1 5587 6581 -1 1 1455 230 0 33 0 chrX 114124385 114124415 -52525881 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1455 1328 179 77 4 chrX 114124415 114124662 -52525634 + Lx6 LINE L1 6365 6629 -831 1 1455 1749 193 38 51 chrX 114124671 114125043 -52525253 - ORR1B2 LTR MaLR 0 367 1 1 1455 5770 208 66 13 chrX 114125043 114126475 -52523821 - ORR1B2-int LTR MaLR 0 1509 1 1 1455 1459 199 122 0 chrX 114126475 114126802 -52523494 - ORR1B2 LTR MaLR 0 367 1 1 1455 263 279 26 51 chrX 114126811 114126928 -52523368 + Lx6 LINE L1 6668 6781 -679 1 1455 624 27 0 0 chrX 114126928 114127002 -52523294 + (TTTC)n Simple_repeat Simple_repeat 2 75 0 1 1455 969 93 14 0 chrX 114127002 114127141 -52523155 - B1_Mus1 SINE Alu -2 146 6 1 1455 2472 270 34 15 chrX 114127168 114127837 -52522459 + Lx6 LINE L1 6779 7460 0 1 1455 323 125 0 0 chrX 114129148 114129196 -52521100 - RLTR45-int LTR ERVK -5105 2139 2092 1 1455 342 0 0 0 chrX 114129196 114129234 -52521062 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 1455 3174 39 16 0 chrX 114129261 114129649 -52520647 + MTA_Mm LTR MaLR 3 396 0 1 1455 8065 58 38 2 chrX 114129649 114130709 -52519587 + MTA_Mm-int LTR MaLR 1 1098 0 1 1455 3317 35 5 0 chrX 114130709 114131103 -52519193 + MTA_Mm LTR MaLR 1 396 0 1 1455 2446 281 26 80 chrX 114131270 114131597 -52518699 - RMER1C Other Other -2 1340 1038 1 1455 4932 227 14 7 chrX 114131597 114132691 -52517605 + Lx2B LINE L1 5885 6985 -15 1 1455 2446 283 26 78 chrX 114132691 114133274 -52517022 - RMER1C Other Other -305 1037 500 1 1455 482 302 48 112 chrX 114133292 114133766 -52516530 - L1MD1 LINE L1 -67 6175 5732 1 1455 291 240 59 0 chrX 114134039 114134158 -52516138 - L1M3 LINE L1 -705 5607 5481 1 1455 344 360 64 29 chrX 114134268 114134408 -52515888 - RSINE1 SINE B4 -19 146 2 1 1455 432 0 0 0 chrX 114134849 114134897 -52515399 + (TCTA)n Simple_repeat Simple_repeat 4 51 0 1 1455 228 234 0 0 chrX 114135460 114135507 -52514789 + ID4_ SINE ID 3 49 -34 1 1455 23 33 0 0 chrX 114135899 114135929 -52514367 + AT_rich Low_complexity Low_complexity 1 30 0 1 1455 690 65 0 0 chrX 114136017 114136109 -52514187 + (GAAA)n Simple_repeat Simple_repeat 1 92 0 1 1455 860 28 9 0 chrX 114136109 114136216 -52514080 + (GGGAA)n Simple_repeat Simple_repeat 3 110 0 1 1455 257 305 48 0 chrX 114137155 114137260 -52513036 - Lx7 LINE L1 0 7696 7587 1 1455 1659 262 48 30 chrX 114137327 114137417 -52512879 - RLTR20A2 LTR ERVK 0 578 492 1 1455 360 0 0 0 chrX 114137417 114137457 -52512839 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1455 1659 257 49 27 chrX 114137457 114137909 -52512387 - RLTR20A2 LTR ERVK -87 491 1 1 1455 28 48 0 0 chrX 114137980 114138022 -52512274 + AT_rich Low_complexity Low_complexity 1 42 0 1 1455 2156 286 61 25 chrX 114140583 114141719 -52508577 + L1_Mur3 LINE L1 18 961 -6751 1 1455 2395 204 34 82 chrX 114142071 114142750 -52507546 - RMER6C LTR ERVK -44 646 1 1 1455 1155 82 0 0 chrX 114143613 114143759 -52506537 + B1_Mm SINE Alu 2 147 0 1 1455 216 86 0 0 chrX 114143974 114144009 -52506287 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1455 409 386 56 14 chrX 114144140 114144353 -52505943 + B4A SINE B4 71 292 0 1 1455 1473 352 102 10 chrX 114145253 114146238 -52504058 + Lx8 LINE L1 6370 7445 -28 1 1455 2691 213 14 107 chrX 114146354 114147155 -52503141 + L1VL4 LINE L1 204 929 -5373 1 1455 3964 182 108 10 chrX 114147153 114147937 -52502359 - L1VL2 LINE L1 -5380 955 95 1 1455 1107 312 67 62 chrX 114147967 114149565 -52500731 + L1_Mur3 LINE L1 2211 3816 -2064 1 1455 786 48 0 0 chrX 114150226 114150329 -52499967 + (TG)n Simple_repeat Simple_repeat 1 103 0 1 1455 264 405 15 15 chrX 114150341 114150474 -52499822 - RSINE1 SINE B4 -22 143 11 1 1455 257 229 0 0 chrX 114150492 114150553 -52499743 - L1MB4 LINE L1 -53 6127 6067 1 1455 210 111 0 0 chrX 114150554 114150577 -52499719 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1455 583 272 13 13 chrX 114150577 114150726 -52499570 - B1_Mur2 SINE Alu 0 149 1 1 1455 210 111 0 0 chrX 114150726 114150738 -52499558 + (T)n Simple_repeat Simple_repeat 1 12 0 1 1455 255 309 70 23 chrX 114151144 114151230 -52499066 - PB1D7 SINE Alu -1 119 30 1 1455 316 282 0 14 chrX 114151335 114151407 -52498889 - ID_B1 SINE B4 -63 161 91 1 1455 554 306 5 57 chrX 114151807 114152018 -52498278 - B3 SINE B2 -13 203 4 1 1455 582 28 0 0 chrX 114152021 114152093 -52498203 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 1455 237 333 29 0 chrX 114152420 114152489 -52497807 + MLT1J LTR MaLR 186 256 -256 1 1455 288 0 0 0 chrX 114154093 114154125 -52496171 + (TAA)n Simple_repeat Simple_repeat 2 33 0 1 1455 209 339 6 11 chrX 114154362 114154541 -52495755 + (CATA)n Simple_repeat Simple_repeat 3 180 0 1 1455 2387 200 68 31 chrX 114154775 114155441 -52494855 - RMER6C LTR ERVK 0 690 1 1 1455 324 0 0 0 chrX 114156379 114156415 -52493881 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1455 360 299 65 65 chrX 114156529 114156715 -52493581 - RMER5 LTR ERV1 0 534 349 1 1455 274 400 0 46 chrX 114156721 114156759 -52493537 + RSINE1 SINE B4 5 42 -123 1 1455 2645 76 9 0 chrX 114156759 114157102 -52493194 + ORR1A0 LTR MaLR 1 346 0 1 1455 274 400 0 46 chrX 114157102 114157194 -52493102 + RSINE1 SINE B4 43 129 -36 1 1455 852 251 80 35 chrX 114157168 114157506 -52492790 - RLTR20C LTR ERVK -162 343 12 1 1455 1011 173 45 40 chrX 114157519 114157718 -52492578 + MTE2b LTR MaLR 168 367 -12 1 1455 976 30 0 8 chrX 114157791 114157924 -52492372 - L1Md_F2 LINE L1 -11 6571 6440 1 1455 711 223 7 0 chrX 114157938 114158077 -52492219 - B1_Mus1 SINE Alu -7 141 2 1 1455 4656 79 11 8 chrX 114158603 114159241 -52491055 - L1Md_F2 LINE L1 -1 6581 5942 1 1455 3414 87 0 0 chrX 114159243 114159724 -52490572 + L1Md_F2 LINE L1 3057 3537 -2346 1 1455 10149 75 7 1 chrX 114159719 114161244 -52489052 + L1Md_F2 LINE L1 4478 6014 -568 1 1455 873 253 213 10 chrX 114161412 114161708 -52488588 + MTD LTR MaLR 64 419 0 1 1455 444 309 42 36 chrX 114161708 114161872 -52488424 - RMER5 LTR ERV1 -324 210 46 1 1455 455 286 48 74 chrX 114161958 114162147 -52488149 - RLTR23 LTR ERV1 0 430 247 1 1455 459 0 0 0 chrX 114162603 114162654 -52487642 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1456 407 276 270 37 chrX 114164050 114164265 -52486031 + RMER5 LTR ERV1 252 516 -18 1 1456 22 0 0 0 chrX 114164849 114164871 -52485425 + AT_rich Low_complexity Low_complexity 1 22 0 1 1456 964 212 11 0 chrX 114165336 114165520 -52484776 - URR1B DNA MER1_type 0 225 40 1 1456 1422 264 25 14 chrX 114166177 114166534 -52483762 + MT2A LTR ERVL 3 363 -170 1 1456 24 0 0 0 chrX 114166853 114166877 -52483419 + AT_rich Low_complexity Low_complexity 1 24 0 1 1456 2147 265 68 7 chrX 114166880 114167420 -52482876 - Lx5 LINE L1 -3 7047 6475 1 1456 3842 206 23 12 chrX 114167410 114168200 -52482096 - Lx5 LINE L1 -686 6364 5591 1 1456 441 309 116 33 chrX 114168201 114168442 -52481854 + MLT-int LTR MaLR 1428 1688 -47 1 1456 7773 39 0 1 chrX 114168492 114169433 -52480863 + L1Md_F3 LINE L1 5645 6584 0 1 1456 326 274 21 21 chrX 114169594 114169691 -52480605 + MLT1A0 LTR MaLR 250 346 -19 1 1456 25 51 0 0 chrX 114169817 114169856 -52480440 + AT_rich Low_complexity Low_complexity 1 39 0 1 1456 22 35 0 0 chrX 114169947 114169976 -52480320 + AT_rich Low_complexity Low_complexity 1 29 0 1 1456 180 0 0 0 chrX 114170055 114170075 -52480221 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1456 3363 177 31 30 chrX 114170454 114171153 -52479143 - RMER6A LTR ERVK 0 756 57 2 1456 320 125 16 0 chrX 114171159 114171223 -52479073 + (TTTTG)n Simple_repeat Simple_repeat 1 65 0 2 1456 357 130 0 0 chrX 114171223 114171277 -52479019 - RMER6A LTR ERVK -405 56 3 2 1456 846 241 81 81 chrX 114172004 114172324 -52477972 + Lx9 LINE L1 7195 7514 -130 2 1456 287 244 11 11 chrX 114172325 114172412 -52477884 + (TA)n Simple_repeat Simple_repeat 1 87 0 2 1456 22 35 0 0 chrX 114172532 114172561 -52477735 + AT_rich Low_complexity Low_complexity 1 29 0 2 1456 520 272 62 83 chrX 114172592 114173047 -52477249 + Lx7 LINE L1 7104 7616 -28 2 1456 1181 176 68 4 chrX 114173166 114173400 -52476896 + ORR1A4 LTR MaLR 81 329 0 2 1456 8209 39 1 0 chrX 114173840 114175361 -52474935 + L1Md_F2 LINE L1 5087 6582 0 2 1456 285 318 46 18 chrX 114175937 114176046 -52474250 + PB1D9 SINE Alu 8 119 -1 2 1456 1120 121 40 6 chrX 114177249 114177424 -52472872 + B2_Mm2 SINE B2 1 181 -14 2 1456 429 316 26 19 chrX 114178022 114178177 -52472119 - MLT1A1 LTR MaLR 0 408 253 2 1456 321 387 28 6 chrX 114178448 114178705 -52471591 - MLT1A1-int LTR MaLR -302 1433 990 2 1456 295 330 26 5 chrX 114179429 114179624 -52470672 + L1_Mur3 LINE L1 3826 4024 -2119 2 1456 560 286 50 7 chrX 114179667 114179808 -52470488 + RSINE1 SINE B4 9 155 -10 2 1456 337 152 136 0 chrX 114179848 114179914 -52470382 + HAL1-3A_ME LINE L1 1976 2050 -808 2 1456 32 0 0 0 chrX 114180076 114180108 -52470188 + AT_rich Low_complexity Low_complexity 1 32 0 2 1456 480 48 0 0 chrX 114180241 114180304 -52469992 + (CAAAA)n Simple_repeat Simple_repeat 5 67 0 2 1456 707 298 29 23 chrX 114180306 114180690 -52469606 + L1_Mur3 LINE L1 4384 4794 -1349 2 1456 477 303 137 24 chrX 114180688 114181097 -52469199 - Lx8 LINE L1 -1211 6262 5799 2 1456 450 36 0 0 chrX 114181158 114181214 -52469082 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1456 1285 92 11 5 chrX 114181255 114181440 -52468856 + B2_Mm1t SINE B2 1 186 -7 2 1456 21 0 0 0 chrX 114181738 114181759 -52468537 + AT_rich Low_complexity Low_complexity 1 21 0 2 1456 21 0 0 0 chrX 114181868 114181889 -52468407 + AT_rich Low_complexity Low_complexity 1 21 0 2 1456 702 333 84 12 chrX 114182337 114183316 -52466980 - L1MA9 LINE L1 -2 6310 5254 2 1456 348 328 81 49 chrX 114183479 114183726 -52466570 - L1M3e LINE L1 -6766 264 10 2 1456 453 36 0 0 chrX 114183751 114183806 -52466490 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1456 287 351 99 43 chrX 114183924 114184085 -52466211 - B4 SINE B4 -118 174 5 2 1456 370 266 138 0 chrX 114185237 114185346 -52464950 + RSINE1 SINE B4 4 127 -38 2 1456 366 157 0 0 chrX 114185364 114185447 -52464849 + (TAGA)n Simple_repeat Simple_repeat 2 84 0 2 1456 444 37 0 0 chrX 114185871 114185925 -52464371 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 1456 291 366 115 37 chrX 114186223 114186606 -52463690 - Lx8 LINE L1 0 7473 7061 2 1456 315 210 0 0 chrX 114186609 114186671 -52463625 + RLTR23 LTR ERV1 8 69 -361 2 1456 271 319 128 69 chrX 114186766 114187072 -52463224 + RLTR23 LTR ERV1 107 430 0 2 1456 6378 139 49 2 chrX 114187232 114188766 -52461530 - Lx LINE L1 -9 6645 5031 2 1456 892 115 19 0 chrX 114188766 114188923 -52461373 + (TTTC)n Simple_repeat Simple_repeat 3 162 0 2 1456 4218 194 28 104 chrX 114188923 114189264 -52461032 - L1_Mur2 LINE L1 -853 5024 4801 2 1456 2622 181 50 4 chrX 114189261 114189761 -52460535 - Lx2 LINE L1 -326 6671 6149 2 1456 1831 156 15 9 chrX 114189761 114190090 -52460206 + Lx2 LINE L1 6666 6996 -1 2 1456 7795 161 26 23 chrX 114190096 114191073 -52459223 - L1_Mur2 LINE L1 -1068 4809 3859 2 1456 555 56 0 0 chrX 114191073 114191144 -52459152 + (TA)n Simple_repeat Simple_repeat 1 71 0 2 1456 7795 161 26 23 chrX 114191144 114191680 -52458616 - L1_Mur2 LINE L1 -2019 3858 3291 2 1456 395 304 158 0 chrX 114191881 114192065 -52458231 + MER57C2 LTR ERV1 218 430 -4 2 1456 321 370 15 7 chrX 114192145 114192281 -52458015 - B1F SINE Alu -12 137 1 2 1456 922 323 55 21 chrX 114192326 114192652 -52457644 - MTE2a LTR MaLR -28 351 15 2 1456 25 0 0 0 chrX 114192694 114192719 -52457577 + AT_rich Low_complexity Low_complexity 1 25 0 2 1456 774 321 119 51 chrX 114192755 114193428 -52456868 - L1M4 LINE L1 -5311 1231 459 2 1456 279 0 0 0 chrX 114193428 114193459 -52456837 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1456 306 0 0 0 chrX 114193459 114193492 -52456804 + (GA)n Simple_repeat Simple_repeat 1 34 0 2 1456 774 321 119 51 chrX 114193492 114193913 -52456383 - L1M4 LINE L1 -6084 458 63 2 1456 291 285 6 9 chrX 114194034 114194148 -52456148 - L1M3 LINE L1 -365 5803 5691 2 1456 598 303 14 37 chrX 114194178 114194394 -52455902 - B3A SINE B2 -1 215 5 2 1456 242 210 0 31 chrX 114194899 114194963 -52455333 - L1M3 LINE L1 -1018 5122 5061 2 1456 626 304 107 46 chrX 114195048 114195310 -52454986 - B4A SINE B4 -14 278 1 2 1456 231 259 8 77 chrX 114195317 114195434 -52454862 - L1M3 LINE L1 -1096 5050 4942 2 1456 309 118 0 0 chrX 114196095 114196146 -52454150 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1456 2742 61 0 3 chrX 114196470 114196833 -52453463 - L1_Mm LINE L1 -1899 3984 3623 2 1456 3951 84 14 23 chrX 114196833 114197407 -52452889 + L1Md_F2 LINE L1 6014 6582 0 2 1456 5145 168 21 5 chrX 114197607 114198498 -52451798 + Lx4A LINE L1 6150 7055 -3 2 1456 837 329 85 28 chrX 114198551 114198905 -52451391 + MTD LTR MaLR 18 391 -28 2 1456 1061 143 0 91 chrX 114198918 114199148 -52451148 + Lx LINE L1 6444 6652 -2 2 1456 4234 129 39 34 chrX 114199240 114200651 -52449645 + L1VL1 LINE L1 221 1637 -2061 2 1456 788 98 0 0 chrX 114200659 114200771 -52449525 - L1_Mur1 LINE L1 -1122 4764 4653 2 1456 2152 221 26 22 chrX 114200772 114201782 -52448514 + L1Md_F LINE L1 2 696 -5823 2 1456 2224 216 25 22 chrX 114201796 114202811 -52447485 + L1Md_F LINE L1 2 696 -5823 2 1456 36350 56 1 24 chrX 114202825 114208507 -52441789 + L1Md_T LINE L1 99 5586 -297 2 1456 7998 57 0 0 chrX 114208507 114209503 -52440793 + L1Md_T LINE L1 5587 6582 0 2 1456 1618 177 3 3 chrX 114209519 114209831 -52440465 - L1_Mur1 LINE L1 -1220 4666 4355 2 1456 28 91 0 0 chrX 114209894 114209971 -52440325 + AT_rich Low_complexity Low_complexity 1 77 0 2 1456 631 350 67 35 chrX 114210537 114210910 -52439386 - MLT1B LTR MaLR 0 390 6 2 1456 2029 222 136 89 chrX 114211320 114211717 -52438579 - RMER20B LTR ERVK -2 625 217 2 1456 824 59 169 0 chrX 114211717 114211835 -52438461 - B1_Mm SINE Alu -8 139 2 2 1456 2029 222 136 89 chrX 114211835 114212034 -52438262 - RMER20B LTR ERVK -411 216 1 2 1456 2464 302 80 41 chrX 114212037 114212240 -52438056 + Lx8 LINE L1 6215 6423 -1050 2 1456 396 40 0 0 chrX 114212240 114212290 -52438006 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1456 2464 302 80 41 chrX 114212290 114213126 -52437170 + Lx8 LINE L1 6424 7294 -179 2 1456 315 0 0 0 chrX 114213159 114213194 -52437102 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 2 1456 228 224 0 20 chrX 114213258 114213308 -52436988 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1456 422 265 26 0 chrX 114213414 114213531 -52436765 - RMER1C Other Other -131 1211 1092 2 1456 363 44 0 0 chrX 114213879 114213924 -52436372 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 2 1456 600 84 0 0 chrX 114213927 114214010 -52436286 + (TC)n Simple_repeat Simple_repeat 2 84 0 2 1456 401 176 141 23 chrX 114214629 114214757 -52435539 + Lx3A LINE L1 6839 6981 0 2 1456 43 71 0 0 chrX 114214801 114214886 -52435410 + AT_rich Low_complexity Low_complexity 1 85 0 2 1456 30 0 0 0 chrX 114215384 114215414 -52434882 + AT_rich Low_complexity Low_complexity 1 30 0 2 1456 22 35 0 0 chrX 114215433 114215462 -52434834 + AT_rich Low_complexity Low_complexity 1 29 0 2 1456 568 90 0 0 chrX 114215462 114215540 -52434756 + L1_Mm LINE L1 2263 2340 -3543 2 1456 450 0 0 0 chrX 114215544 114215594 -52434702 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 1456 2695 168 27 6 chrX 114215594 114216073 -52434223 - Lx4A LINE L1 -7 7051 6563 2 1456 2467 168 41 0 chrX 114216076 114216535 -52433761 - Lx4A LINE L1 -846 6212 5735 2 1456 236 30 30 0 chrX 114216937 114216970 -52433326 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2 1456 440 236 17 17 chrX 114216970 114217094 -52433202 - Lx3B LINE L1 -2 7007 6862 2 1456 222 37 0 0 chrX 114217594 114217621 -52432675 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1456 283 338 50 38 chrX 114217833 114217993 -52432303 - L1_Rod LINE L1 -6933 239 78 2 1456 2625 92 26 0 chrX 114218706 114219087 -52431209 - MTA_Mm LTR MaLR -3 393 3 2 1456 427 263 0 0 chrX 114219094 114219193 -52431103 + L1Md_F2 LINE L1 705 803 -5813 2 1456 958 104 19 13 chrX 114219356 114219511 -52430785 + L1_Mus3 LINE L1 6456 6611 -27 2 1456 2579 79 0 0 chrX 114219509 114219839 -52430457 - L1_Mus2 LINE L1 -129 6438 6109 2 1456 641 74 0 0 chrX 114219843 114219938 -52430358 + L1_Mus2 LINE L1 6471 6565 -1 2 1456 22 80 0 0 chrX 114219938 114219988 -52430308 + AT_rich Low_complexity Low_complexity 1 50 0 2 1456 16478 149 70 46 chrX 114220189 114224695 -52425601 + L1Md_F2 LINE L1 981 5586 -297 2 1456 7610 51 3 36 chrX 114224696 114225758 -52424538 + L1Md_F2 LINE L1 5588 6582 0 2 1456 21 0 0 0 chrX 114226060 114226081 -52424215 + AT_rich Low_complexity Low_complexity 1 21 0 2 1456 257 287 107 50 chrX 114226506 114226627 -52423669 - MER5A1 DNA MER1_type -2 164 37 2 1456 22 94 0 0 chrX 114227446 114227510 -52422786 + AT_rich Low_complexity Low_complexity 1 64 0 2 1456 286 288 137 0 chrX 114227737 114227883 -52422413 - L1M3 LINE L1 -738 5442 5277 2 1456 263 140 0 20 chrX 114227970 114228021 -52422275 + CT-rich Low_complexity Low_complexity 3 52 0 2 1456 790 253 101 4 chrX 114228451 114228689 -52421607 + Lx7 LINE L1 5603 5863 -1833 2 1456 417 110 0 0 chrX 114228952 114229025 -52421271 + (A)n Simple_repeat Simple_repeat 1 73 0 2 1456 613 368 39 68 chrX 114229133 114229749 -52420547 + Lx8 LINE L1 6828 7425 -48 2 1456 41 36 0 0 chrX 114230025 114230080 -52420216 + AT_rich Low_complexity Low_complexity 1 55 0 2 1456 4241 145 25 2 chrX 114230935 114231997 -52418299 - Lx LINE L1 -448 6206 5131 2 1456 306 289 22 11 chrX 114232185 114232276 -52418020 - L1M2 LINE L1 -1078 5065 4974 2 1456 318 304 58 58 chrX 114232324 114232495 -52417801 - L1M4 LINE L1 -1254 4892 4722 2 1456 445 281 116 0 chrX 114232507 114232628 -52417668 + B3A SINE B2 11 145 -53 2 1456 35840 51 12 3 chrX 114232726 114237978 -52412318 + L1Md_T LINE L1 318 5586 -297 2 1456 7977 55 1 0 chrX 114237978 114238973 -52411323 + L1Md_T LINE L1 5587 6582 0 2 1456 1160 74 0 0 chrX 114239305 114239453 -52410843 - B1_Mus1 SINE Alu 0 148 1 2 1456 271 212 24 0 chrX 114239987 114240072 -52410224 + GA-rich Low_complexity Low_complexity 2 88 0 3 1456 238 377 90 33 chrX 114240201 114240412 -52409884 - MLT2E LTR ERVL -403 225 3 3 1456 427 320 76 22 chrX 114240858 114241082 -52409214 + MLT-int LTR MaLR 1459 1694 -41 3 1456 1107 116 16 11 chrX 114242356 114242547 -52407749 - L1_Mus4 LINE L1 -6 6630 6439 3 1456 1734 171 51 88 chrX 114242558 114243091 -52407205 - RMER17A LTR ERVK -2 807 295 3 1456 2148 92 0 20 chrX 114243091 114243391 -52406905 - L1Md_F2 LINE L1 -139 6443 6150 3 1456 811 73 0 31 chrX 114243391 114243519 -52406777 + L1Md_F2 LINE L1 6447 6570 -12 3 1456 1988 90 7 0 chrX 114243519 114243798 -52406498 - RMER17A LTR ERVK -469 282 2 3 1456 3667 112 4 0 chrX 114243799 114244334 -52405962 + L1_Mus4 LINE L1 5919 6455 -181 3 1456 2269 95 67 128 chrX 114244505 114245011 -52405285 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1456 6291 65 12 11 chrX 114245013 114245839 -52404457 - IAPEz-int LTR ERVK -2 6479 5653 3 1456 10493 86 44 41 chrX 114245834 114247732 -52402564 - IAPEz-int LTR ERVK -4781 1700 9 3 1456 2269 107 53 125 chrX 114247733 114248245 -52402051 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1456 224 30 0 29 chrX 114248253 114248287 -52402009 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1456 292 356 0 43 chrX 114248290 114248428 -52401868 + B3A SINE B2 58 189 -9 3 1456 678 238 25 18 chrX 114249306 114249469 -52400827 + MER5A1 DNA MER1_type 3 166 0 3 1456 23 0 0 0 chrX 114249867 114249890 -52400406 + AT_rich Low_complexity Low_complexity 1 23 0 3 1456 33593 81 3 4 chrX 114251106 114252445 -52397851 - L1Md_F2 LINE L1 0 6582 5244 3 1456 447 19 0 0 chrX 114252445 114252497 -52397799 + (TA)n Simple_repeat Simple_repeat 1 52 0 3 1456 33593 105 7 7 chrX 114252497 114257517 -52392779 - L1Md_F2 LINE L1 -640 5243 238 3 1456 19955 113 25 3 chrX 114257517 114261491 -52388805 - L1Md_F LINE L1 -1655 4228 168 3 1456 261 309 73 0 chrX 114261593 114261688 -52388608 - PB1D10 SINE Alu -1 119 16 3 1456 4049 161 3 1 chrX 114261959 114262654 -52387642 + L1_Mm LINE L1 4676 5371 -512 3 1456 11159 96 17 11 chrX 114262652 114265035 -52385261 + L1Md_F2 LINE L1 376 2773 -3110 3 1456 12802 98 7 2 chrX 114265027 114266851 -52383445 + L1Md_F2 LINE L1 3752 5585 -298 3 1456 7038 88 17 16 chrX 114266852 114267845 -52382451 + L1Md_F2 LINE L1 5587 6580 -2 3 1456 1516 170 33 0 chrX 114267846 114268116 -52382180 + L1_Mm LINE L1 5360 5638 -245 3 1456 923 113 27 0 chrX 114268136 114268286 -52382010 - L1_Mus2 LINE L1 -1 6565 6412 3 1456 1747 89 8 16 chrX 114268293 114268545 -52381751 + L1_Mus2 LINE L1 6176 6425 -141 3 1456 6976 102 6 6 chrX 114268542 114269544 -52380752 + L1_Mus3 LINE L1 5629 6630 -8 3 1456 260 226 32 0 chrX 114270605 114270667 -52379629 + MADE2 DNA Mariner 8 71 -9 3 1456 426 290 82 22 chrX 114270682 114270816 -52379480 + B3A SINE B2 2 143 -55 3 1456 1190 99 21 3 chrX 114270819 114271157 -52379139 + (TCTCCC)n Simple_repeat Simple_repeat 1 344 0 3 1456 1594 271 46 10 chrX 114271245 114271636 -52378660 + MTD LTR MaLR 15 419 0 3 1456 204 204 37 0 chrX 114273061 114273115 -52377181 + CT-rich Low_complexity Low_complexity 3 58 0 3 1456 35 41 0 0 chrX 114273348 114273397 -52376899 + AT_rich Low_complexity Low_complexity 1 49 0 3 1456 1028 106 6 12 chrX 114273513 114273685 -52376611 - L1Md_F2 LINE L1 -1 6581 6411 3 1456 210 118 0 0 chrX 114273943 114273977 -52376319 + (GGGAGA)n Simple_repeat Simple_repeat 1 34 0 3 1456 408 271 157 68 chrX 114274006 114274330 -52375966 + L1M2 LINE L1 4587 4939 -1204 3 1456 212 386 37 52 chrX 114274404 114274538 -52375758 + ID_B1 SINE B4 22 153 -71 3 1456 378 336 18 5 chrX 114274636 114274857 -52375439 + L1M2 LINE L1 5023 5246 -897 3 1456 1337 330 67 24 chrX 114275000 114275118 -52375178 + Lx8 LINE L1 6218 6327 -1146 3 1456 863 167 174 15 chrX 114275118 114275313 -52374983 - URR1A DNA MER1_type 0 226 1 3 1456 1337 330 67 24 chrX 114275313 114275380 -52374916 + Lx8 LINE L1 6328 6394 -1079 3 1456 194 0 39 0 chrX 114275380 114275406 -52374890 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1456 1337 330 67 24 chrX 114275406 114275926 -52374370 + Lx8 LINE L1 6395 6954 -519 3 1456 188 35 35 0 chrX 114277136 114277165 -52373131 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1456 4420 75 0 7 chrX 114277169 114277750 -52372546 - L1Md_F2 LINE L1 -11 6571 5995 3 1456 1047 66 73 0 chrX 114277776 114277913 -52372383 - B1_Mm SINE Alu 0 147 1 3 1456 3290 188 130 43 chrX 114277948 114278817 -52371479 - RMER17B LTR ERVK -9 949 5 3 1456 920 312 60 37 chrX 114278876 114279062 -52371234 - MTE2a LTR MaLR -6 373 191 3 1456 2714 85 5 49 chrX 114279062 114279469 -52370827 + L1_Mus2 LINE L1 6178 6566 0 3 1456 920 312 60 37 chrX 114279469 114279631 -52370665 - MTE2a LTR MaLR -189 190 17 3 1456 633 268 30 94 chrX 114279634 114279836 -52370460 - ORR1D2 LTR MaLR -4 366 178 3 1456 513 0 0 0 chrX 114279837 114279894 -52370402 + (GA)n Simple_repeat Simple_repeat 2 58 0 3 1456 255 276 48 0 chrX 114279906 114280011 -52370285 - L1_Rod LINE L1 -2539 3308 3199 3 1456 249 23 114 0 chrX 114280017 114280061 -52370235 + Lx2 LINE L1 6948 6996 -1 3 1456 306 106 0 0 chrX 114280133 114280180 -52370116 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 3 1456 1178 282 51 22 chrX 114280195 114280702 -52369594 - L1_Rod LINE L1 -2748 3099 2578 3 1456 200 218 13 84 chrX 114280733 114280888 -52369408 + T-rich Low_complexity Low_complexity 2 145 0 3 1456 2514 240 37 29 chrX 114280888 114281880 -52368416 - L1_Rod LINE L1 -3937 1910 898 3 1456 8240 46 7 2 chrX 114282351 114284051 -52366245 - L1Md_F2 LINE L1 -2 6580 4873 3 1456 23 33 0 0 chrX 114284277 114284307 -52365989 + AT_rich Low_complexity Low_complexity 1 30 0 3 1456 220 356 9 37 chrX 114284616 114284724 -52365572 + L3 LINE CR1 4267 4371 -118 3 1456 1421 251 13 19 chrX 114284842 114285216 -52365080 - ORR1D1 LTR MaLR -2 372 1 3 1456 25 31 0 0 chrX 114285264 114285296 -52365000 + AT_rich Low_complexity Low_complexity 1 32 0 3 1456 2341 329 43 54 chrX 114286373 114287615 -52362681 - Lx8 LINE L1 0 7473 6245 3 1456 18732 73 8 1 chrX 114287742 114290982 -52359314 - L1Md_F2 LINE L1 -12 6570 3305 3 1456 558 367 109 22 chrX 114291061 114291705 -52358591 - L1ME3A LINE L1 -3 6170 5471 3 1456 1122 264 18 74 chrX 114291781 114292393 -52357903 - RLTR31_Mur LTR ERVK 0 553 96 3 1456 189 74 0 0 chrX 114293103 114293130 -52357166 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1456 298 317 9 38 chrX 114293414 114293519 -52356777 + RSINE1 SINE B4 28 129 -36 3 1456 527 298 78 34 chrX 114293871 114294076 -52356220 + ID_B1 SINE B4 10 223 -1 3 1457 22 0 0 0 chrX 114294931 114294953 -52355343 + AT_rich Low_complexity Low_complexity 1 22 0 3 1457 1600 236 170 35 chrX 114295271 114295759 -52354537 + RMER15 LTR ERVL 22 575 0 3 1457 1058 200 12 239 chrX 114296004 114296490 -52353806 + ORR1C1 LTR MaLR 3 378 0 3 1457 37 23 0 0 chrX 114296927 114296971 -52353325 + AT_rich Low_complexity Low_complexity 1 44 0 3 1457 283 44 44 0 chrX 114297340 114297385 -52352911 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 3 1457 29232 85 1 18 chrX 114297404 114301579 -52348717 + L1Md_F2 LINE L1 1481 5585 -298 3 1457 7509 65 21 4 chrX 114301580 114302559 -52347737 + L1Md_F2 LINE L1 5587 6582 0 3 1457 17278 102 4 2 chrX 114302560 114305062 -52345234 + L1Md_F2 LINE L1 3079 5584 -299 3 1457 7041 90 16 9 chrX 114305064 114306052 -52344244 + L1Md_F2 LINE L1 5587 6581 -1 3 1457 283 336 85 17 chrX 114306445 114306563 -52343733 - ID_B1 SINE B4 -22 202 77 3 1457 497 364 0 0 chrX 114306777 114306909 -52343387 - B1_Mur1 SINE Alu -17 132 1 3 1457 562 343 90 111 chrX 114307184 114307571 -52342725 - MTEa LTR MaLR 0 379 1 3 1457 28 61 0 0 chrX 114307736 114307785 -52342511 + AT_rich Low_complexity Low_complexity 1 49 0 3 1457 204 120 39 20 chrX 114307963 114308014 -52342282 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 3 1457 850 166 210 4 chrX 114308309 114308557 -52341739 + Lx9 LINE L1 7310 7608 -36 3 1457 4390 250 106 7 chrX 114308564 114309767 -52340529 + Lx7 LINE L1 6352 7669 -27 3 1457 2035 124 3 48 chrX 114309767 114310122 -52340174 + L1_Mus4 LINE L1 6297 6635 -1 3 1457 4390 250 106 7 chrX 114310122 114310141 -52340155 + Lx7 LINE L1 7670 7695 -1 3 1457 375 23 0 0 chrX 114310643 114310687 -52339609 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 1457 342 225 108 75 chrX 114310773 114310800 -52339496 - RMER1C Other Other -16 1326 1300 3 1457 2326 166 40 47 chrX 114310800 114311249 -52339047 - RLTR41 LTR ERV1 0 446 1 3 1457 342 225 108 75 chrX 114311249 114311341 -52338955 - RMER1C Other Other -43 1299 1203 3 1457 801 169 11 11 chrX 114311341 114311521 -52338775 + GA-rich Low_complexity Low_complexity 1 180 0 3 1457 1956 247 65 35 chrX 114311523 114312035 -52338261 - RMER1C Other Other -118 1224 698 3 1457 2458 181 63 62 chrX 114312035 114312669 -52337627 - ETnERV2-int LTR ERVK -4344 3062 2428 3 1457 3227 145 47 70 chrX 114312683 114313401 -52336895 - ETnERV2-int LTR ERVK -5630 1776 1075 3 1457 387 0 0 0 chrX 114313401 114313444 -52336852 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 1457 299 291 50 83 chrX 114313571 114313751 -52336545 - ETnERV2-int LTR ERVK -3081 233 60 3 1457 2221 152 58 8 chrX 114313811 114314176 -52336120 - RLTR9A2 LTR ERVK 0 383 1 3 1457 369 317 146 11 chrX 114314223 114314410 -52335886 - RMER1B Other Other -730 336 149 3 1457 488 45 0 15 chrX 114314455 114314523 -52335773 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 1457 411 323 28 84 chrX 114314781 114314960 -52335336 - MTE2a LTR MaLR -13 366 198 3 1457 315 0 0 0 chrX 114315073 114315108 -52335188 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 1457 297 0 0 0 chrX 114315108 114315140 -52335156 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1457 645 49 0 0 chrX 114315878 114315959 -52334337 + (TA)n Simple_repeat Simple_repeat 1 81 0 3 1457 357 43 0 0 chrX 114316443 114316490 -52333806 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1457 258 81 0 0 chrX 114316492 114316529 -52333767 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 1457 239 313 99 37 chrX 114316795 114317037 -52333259 + L1MC4 LINE L1 6833 7089 -953 3 1457 16359 189 48 54 chrX 114317279 114319486 -52330810 + L1VL4 LINE L1 790 3056 -2827 3 1457 476 32 16 0 chrX 114319486 114319548 -52330748 + (CAAAA)n Simple_repeat Simple_repeat 3 65 0 3 1457 16359 198 31 59 chrX 114319548 114320312 -52329984 + L1VL4 LINE L1 3057 3850 -2033 3 1457 180 77 0 0 chrX 114320312 114320338 -52329958 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 3 1457 16359 198 31 59 chrX 114320338 114321930 -52328366 + L1VL4 LINE L1 3851 5264 -619 3 1457 1844 142 112 24 chrX 114321930 114322101 -52328195 + RLTR9E LTR ERVK 1 193 -216 3 1457 3174 171 16 45 chrX 114322101 114322748 -52327548 - RLTR5_Mm LTR ERV1 0 628 1 3 1457 1844 142 112 24 chrX 114322748 114322952 -52327344 + RLTR9E LTR ERVK 194 409 0 3 1457 669 226 28 79 chrX 114322954 114323278 -52327018 + MMETn-int LTR ERVK 2 372 -2942 3 1457 28 0 0 0 chrX 114323284 114323312 -52326984 + AT_rich Low_complexity Low_complexity 1 28 0 3 1457 39401 10 10 16 chrX 114323315 114324966 -52325330 - L1Md_A LINE L1 0 6582 4927 3 1457 225 183 46 77 chrX 114324966 114325031 -52325265 + RMER20A LTR ERVK 186 248 -268 3 1457 39401 10 10 16 chrX 114325031 114329689 -52320607 - L1Md_A LINE L1 0 4926 251 3 1457 319 135 0 19 chrX 114329690 114329743 -52320553 + ETnERV2-int LTR ERVK 2093 2144 -5100 3 1457 284 104 0 0 chrX 114330197 114330245 -52320051 + RMER16-int LTR ERVK 141 188 -5218 3 1457 656 143 25 8 chrX 114330320 114330440 -52319856 + RMER16-int LTR ERVK 1089 1210 -4196 3 1457 599 253 6 38 chrX 114330453 114330613 -52319683 + ETnERV2-int LTR ERVK 2454 2608 -4798 3 1457 5778 157 42 25 chrX 114330613 114331892 -52318404 + ETnERV2-int LTR ERVK 1995 4083 -3323 3 1457 216 86 0 0 chrX 114331892 114331927 -52318369 + (TTAA)n Simple_repeat Simple_repeat 2 36 0 3 1457 3898 180 16 52 chrX 114331927 114332664 -52317632 + ETnERV2-int LTR ERVK 2380 3426 -1980 3 1457 1418 171 11 17 chrX 114332716 114333008 -52317288 + ETnERV2-int LTR ERVK 6221 6426 -980 3 1457 257 128 0 60 chrX 114333105 114333155 -52317141 + RLTR45-int LTR ERVK 6008 6054 -1190 4 1457 1441 154 20 4 chrX 114333172 114333419 -52316877 + ETnERV3-int LTR ERVK 5529 5779 -29 4 1457 1584 211 195 13 chrX 114333432 114333888 -52316408 + RLTR13D6 LTR ERVK 1 539 -363 4 1457 437 39 0 0 chrX 114333888 114333940 -52316356 + ETnERV2-int LTR ERVK 7331 7382 -24 3 1457 3294 184 6 6 chrX 114333944 114333966 -52316330 + Lx LINE L1 5238 5260 -623 4 1457 2051 145 95 13 chrX 114333966 114334344 -52315952 + RLTR9E LTR ERVK 1 409 0 4 1457 6305 168 14 6 chrX 114334344 114334943 -52315353 + Lx LINE L1 5261 5859 -24 4 1457 356 0 23 0 chrX 114334943 114334987 -52315309 + (CAAA)n Simple_repeat Simple_repeat 4 48 0 4 1457 348 24 0 0 chrX 114334992 114335033 -52315263 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1457 6305 148 22 5 chrX 114335033 114335794 -52314502 + Lx LINE L1 5870 6646 -8 4 1457 7183 180 69 10 chrX 114335824 114337390 -52312906 - RMER6-int LTR ERVK -1132 2045 387 4 1457 501 58 0 0 chrX 114337400 114337469 -52312827 + (TTTA)n Simple_repeat Simple_repeat 2 70 0 4 1457 3197 197 48 27 chrX 114337469 114338136 -52312160 - Lx5 LINE L1 -24 7026 6346 4 1457 5377 178 15 25 chrX 114338128 114339225 -52311071 - Lx5 LINE L1 -1401 5649 4559 4 1457 626 211 9 2 chrX 114339649 114339823 -52310473 - L1Md_F LINE L1 -1515 4631 4415 4 1457 1556 319 64 27 chrX 114339801 114340722 -52309574 + L1_Mur3 LINE L1 4728 5682 -198 4 1457 2323 164 2 2 chrX 114340721 114341149 -52309147 - L1_Mm LINE L1 -3715 2168 1741 4 1457 500 76 0 0 chrX 114341147 114341213 -52309083 + L1_Mm LINE L1 4943 5008 -875 4 1457 2478 102 3 6 chrX 114341222 114341586 -52308710 - L1Md_F2 LINE L1 0 6582 6220 4 1457 972 126 0 18 chrX 114341586 114341756 -52308540 + L1Md_F2 LINE L1 6415 6581 -1 4 1457 766 344 41 29 chrX 114341798 114342286 -52308010 - L1MD2 LINE L1 -237 6122 5629 4 1457 2449 230 78 30 chrX 114342291 114343034 -52307262 - L1Md_F LINE L1 -5411 1205 435 4 1457 33 66 0 0 chrX 114343409 114343470 -52306826 + AT_rich Low_complexity Low_complexity 1 61 0 4 1457 390 94 0 0 chrX 114343991 114344055 -52306241 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 1457 346 277 0 0 chrX 114344270 114344353 -52305943 - B4A SINE B4 -208 84 2 4 1457 1029 109 0 0 chrX 114345376 114345523 -52304773 + B1_Mm SINE Alu 1 147 0 4 1457 237 207 0 0 chrX 114345528 114345610 -52304686 + A-rich Low_complexity Low_complexity 1 82 0 4 1457 513 345 8 13 chrX 114345732 114345936 -52304360 + B3A SINE B2 4 203 -13 4 1457 354 146 21 10 chrX 114345936 114346033 -52304263 + (TA)n Simple_repeat Simple_repeat 1 98 0 4 1457 205 127 34 68 chrX 114346285 114346344 -52303952 + T-rich Low_complexity Low_complexity 2 58 0 4 1457 7453 175 42 9 chrX 114346356 114348809 -52301487 - Lx2B LINE L1 -10 6990 4454 4 1457 5177 173 11 37 chrX 114348807 114349588 -52300708 + L1_Mur1 LINE L1 2710 3477 -2409 4 1457 441 36 0 0 chrX 114349588 114349643 -52300653 + (CCA)n Simple_repeat Simple_repeat 1 55 0 4 1457 5177 173 11 37 chrX 114349643 114349986 -52300310 + L1_Mur1 LINE L1 3478 3803 -2083 4 1457 2866 193 22 97 chrX 114349978 114350526 -52299770 - Lx2B LINE L1 -3849 2037 1494 4 1457 6389 164 41 9 chrX 114350526 114351719 -52298577 - Lx2 LINE L1 0 6997 5767 4 1457 2866 153 18 47 chrX 114351719 114352558 -52297738 - Lx2B LINE L1 -4393 1493 742 4 1457 313 299 221 7 chrX 114352936 114353081 -52297215 - MTEb LTR MaLR -3 376 201 4 1457 21 36 0 0 chrX 114354022 114354050 -52296246 + AT_rich Low_complexity Low_complexity 1 28 0 4 1457 3693 44 70 14 chrX 114354125 114354608 -52295688 - L1Md_F2 LINE L1 -1 6581 6072 4 1457 352 310 59 52 chrX 114354774 114354833 -52295463 - B1F2 SINE Alu -2 147 86 4 1457 315 0 0 0 chrX 114354833 114354868 -52295428 + (TATG)n Simple_repeat Simple_repeat 2 36 0 4 1457 352 310 59 52 chrX 114354868 114354944 -52295352 - B1F2 SINE Alu -64 85 11 4 1457 248 328 38 105 chrX 114354873 114355006 -52295290 - B4A SINE B4 -126 166 43 4 1457 408 257 19 9 chrX 114355053 114355159 -52295137 + MER5A DNA MER1_type 7 113 -76 4 1457 25 51 0 0 chrX 114355226 114355265 -52295031 + AT_rich Low_complexity Low_complexity 1 39 0 4 1457 640 299 58 11 chrX 114355304 114355493 -52294803 + MTD LTR MaLR 4 201 -218 4 1457 1496 228 0 0 chrX 114355493 114355800 -52294496 + Lx5 LINE L1 6288 6594 -456 4 1457 519 348 74 30 chrX 114355805 114356170 -52294126 + MER89 LTR ERV1 175 555 -4 4 1457 230 216 0 13 chrX 114356203 114356278 -52294018 + GA-rich Low_complexity Low_complexity 2 75 0 4 1457 5059 95 4 1 chrX 114356457 114357165 -52293131 + L1_Mus4 LINE L1 5925 6634 -2 4 1457 3059 53 8 8 chrX 114358915 114359311 -52290985 + MTA_Mm LTR MaLR 1 396 0 4 1457 255 61 0 0 chrX 114360980 114361013 -52289283 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 4 1457 2999 40 11 13 chrX 114361739 114362121 -52288175 + L1Md_F2 LINE L1 6202 6582 0 4 1457 2857 165 26 22 chrX 114362383 114363070 -52287226 - L1_Mur2 LINE L1 -4060 1817 1129 4 1457 4044 207 45 3 chrX 114363064 114364271 -52286025 + Lx4A LINE L1 4832 6102 -956 4 1457 2695 158 30 0 chrX 114364268 114364699 -52285597 + Lx4A LINE L1 6508 6951 -107 4 1457 455 114 18 37 chrX 114364774 114364883 -52285413 + CT-rich Low_complexity Low_complexity 3 109 0 4 1457 213 39 0 0 chrX 114364976 114365002 -52285294 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1457 384 301 38 164 chrX 114365020 114365179 -52285117 + B1_Mur2 SINE Alu 10 148 -1 4 1457 486 0 0 0 chrX 114365679 114365733 -52284563 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1457 3729 108 54 7 chrX 114366641 114367212 -52283084 - L1_Mus3 LINE L1 0 6638 6041 4 1457 632 299 37 37 chrX 114367385 114367434 -52282862 + RSINE1 SINE B4 2 50 -115 4 1457 378 0 0 0 chrX 114367434 114367476 -52282820 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 4 1457 632 299 37 37 chrX 114367476 114367589 -52282707 + RSINE1 SINE B4 51 162 -3 4 1457 22 35 0 0 chrX 114367605 114367634 -52282662 + AT_rich Low_complexity Low_complexity 1 29 0 4 1457 258 32 0 0 chrX 114368242 114368273 -52282023 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1457 431 365 0 26 chrX 114368601 114368753 -52281543 + B1F2 SINE Alu 1 148 -1 4 1457 250 401 21 49 chrX 114368982 114369126 -52281170 + LTR16B LTR ERVL 1 140 -323 4 1457 246 325 24 12 chrX 114369207 114369291 -52281005 + B3 SINE B2 54 138 -78 4 1457 441 66 0 0 chrX 114369296 114369357 -52280939 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 1457 2857 134 17 13 chrX 114369593 114370062 -52280234 + RLTR31B_Mm LTR ERVK 1 471 -86 4 1457 812 153 0 13 chrX 114370175 114370327 -52279969 + (CATATA)n Simple_repeat Simple_repeat 2 151 0 4 1457 841 282 5 19 chrX 114370579 114370785 -52279511 - B3 SINE B2 0 216 14 4 1457 5525 81 1 3 chrX 114370815 114371561 -52278735 - L1Md_F2 LINE L1 0 6582 5838 4 1457 383 0 0 21 chrX 114371615 114371663 -52278633 + (TTA)n Simple_repeat Simple_repeat 3 49 0 4 1457 204 307 13 0 chrX 114372640 114372715 -52277581 + L2 LINE L2 2263 2338 -1081 4 1457 365 316 99 97 chrX 114373390 114373904 -52276392 - MER34A LTR ERV1 -15 629 124 4 1457 603 81 0 0 chrX 114374317 114374403 -52275893 + (CCTA)n Simple_repeat Simple_repeat 1 86 0 4 1457 1887 262 10 45 chrX 114374405 114374897 -52275399 + MT2A LTR ERVL 15 489 -44 4 1457 246 208 0 0 chrX 114374912 114374965 -52275331 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 1457 22 0 0 0 chrX 114374967 114374989 -52275307 + AT_rich Low_complexity Low_complexity 1 22 0 4 1457 245 240 40 0 chrX 114375425 114375500 -52274796 + (TATATG)n Simple_repeat Simple_repeat 3 80 0 4 1457 188 35 35 0 chrX 114375565 114375594 -52274702 + (TTG)n Simple_repeat Simple_repeat 1 30 0 4 1457 980 90 0 0 chrX 114375594 114375728 -52274568 - B1_Mus1 SINE Alu -13 135 2 4 1457 376 343 0 37 chrX 114375730 114375839 -52274457 + RSINE1 SINE B4 57 161 -4 4 1457 1286 107 6 0 chrX 114376153 114376331 -52273965 - B2_Mm2 SINE B2 -14 181 3 4 1457 2756 175 43 11 chrX 114376499 114377161 -52273135 - Lx4B LINE L1 -920 6138 5455 4 1457 1059 216 124 18 chrX 114377170 114377443 -52272853 + Lx4B LINE L1 6753 7054 -4 4 1457 547 329 7 0 chrX 114377546 114377692 -52272604 - B1_Mur2 SINE Alu -1 148 2 4 1457 390 74 0 0 chrX 114377960 114378014 -52272282 + (CATA)n Simple_repeat Simple_repeat 2 55 0 4 1457 405 0 0 0 chrX 114378500 114378545 -52271751 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1457 210 37 0 0 chrX 114379270 114379297 -52270999 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1457 597 277 0 0 chrX 114380168 114380316 -52269980 - B1_Mur4 SINE Alu -2 148 1 4 1457 30 27 0 0 chrX 114380316 114380353 -52269943 + AT_rich Low_complexity Low_complexity 1 37 0 4 1457 352 317 8 91 chrX 114380415 114380547 -52269749 - B2_Mm2 SINE B2 -72 123 3 4 1457 252 0 0 0 chrX 114380668 114380696 -52269600 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1457 216 94 37 19 chrX 114380825 114380879 -52269417 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 4 1457 592 312 26 26 chrX 114380889 114381080 -52269216 + B3 SINE B2 3 193 -23 4 1457 779 323 30 20 chrX 114381221 114381521 -52268775 + RMER5 LTR ERV1 223 525 -9 4 1457 1077 268 8 11 chrX 114381819 114382083 -52268213 - ORR1C1 LTR MaLR 0 378 116 4 1457 5181 51 1 6 chrX 114382087 114382740 -52267556 - L1Md_F2 LINE L1 0 6582 5933 4 1457 424 143 26 0 chrX 114382740 114382817 -52267479 - ORR1C1-int LTR MaLR -53 1317 1239 4 1457 3528 282 45 33 chrX 114383981 114385353 -52264943 - ORR1C2-int LTR MaLR -124 1385 3 4 1457 1385 278 11 29 chrX 114385369 114385462 -52264834 - ORR1C2 LTR MaLR -13 371 279 4 1457 4511 4 0 0 chrX 114385462 114385955 -52264341 - MT2_Mm LTR ERVL 0 493 1 4 1457 1385 278 11 29 chrX 114385955 114386239 -52264057 - ORR1C2 LTR MaLR -106 278 1 4 1457 26 0 0 0 chrX 114386338 114386364 -52263932 + AT_rich Low_complexity Low_complexity 1 26 0 4 1457 738 93 0 0 chrX 114387342 114387450 -52262846 + (CA)n Simple_repeat Simple_repeat 2 109 0 4 1457 457 238 24 0 chrX 114387480 114387606 -52262690 - L1M2 LINE L1 -1127 5016 4888 4 1457 2395 184 69 29 chrX 114387887 114388378 -52261918 - RLTR11A LTR ERVK -14 514 4 4 1457 297 273 0 25 chrX 114388461 114388540 -52261756 - MTC LTR MaLR 0 400 324 4 1457 564 295 146 79 chrX 114388560 114388898 -52261398 + RMER13A LTR ERVK 21 390 -470 4 1457 462 18 0 0 chrX 114388898 114388953 -52261343 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 1457 564 324 187 52 chrX 114388953 114389210 -52261086 + RMER13A LTR ERVK 391 703 -205 4 1457 1399 285 35 0 chrX 114389298 114389645 -52260651 - MTC LTR MaLR -62 359 1 4 1457 316 275 21 25 chrX 114389663 114389905 -52260391 - L1M2 LINE L1 -2819 3324 3084 4 1457 442 302 73 28 chrX 114390064 114390350 -52259946 - L1M2 LINE L1 -3223 2920 2622 4 1457 398 342 61 13 chrX 114390506 114390817 -52259479 - L1MC3 LINE L1 -1273 6512 6187 4 1457 348 281 99 29 chrX 114391115 114391287 -52259009 + L1MEg2 LINE L1 5 188 -6264 5 1457 682 11 33 0 chrX 114391294 114391384 -52258912 + (GTTTG)n Simple_repeat Simple_repeat 2 94 0 5 1457 925 131 0 35 chrX 114391384 114391527 -52258769 - B1_Mus1 SINE Alu -9 139 2 5 1457 22 106 0 0 chrX 114391813 114391898 -52258398 + AT_rich Low_complexity Low_complexity 1 85 0 5 1457 2661 108 44 3 chrX 114391956 114392345 -52257951 - RLTR44A LTR ERVK 0 405 1 5 1457 961 296 26 17 chrX 114392390 114392599 -52257697 + Lx8 LINE L1 6549 6756 -717 5 1457 243 0 0 0 chrX 114392599 114392626 -52257670 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1457 961 296 26 17 chrX 114392626 114392718 -52257578 + Lx8 LINE L1 6757 6852 -621 5 1457 24 67 0 0 chrX 114392731 114392776 -52257520 + AT_rich Low_complexity Low_complexity 1 45 0 5 1457 1286 158 5 0 chrX 114392776 114392991 -52257305 - Lx2 LINE L1 -6 6991 6776 5 1457 6439 160 24 12 chrX 114392995 114395061 -52255235 - Lx2 LINE L1 -356 6641 4546 5 1457 250 41 39 58 chrX 114395093 114395145 -52255151 + (TTTTTG)n Simple_repeat Simple_repeat 1 51 0 5 1457 420 154 91 0 chrX 114395145 114395238 -52255058 - Lx2 LINE L1 -1339 4547 4444 5 1457 5317 150 19 13 chrX 114395256 114396177 -52254119 - Lx3A LINE L1 -5 6976 6050 5 1457 585 355 110 7 chrX 114396259 114396531 -52253765 + Lx8 LINE L1 6955 7254 -219 5 1457 23 33 0 0 chrX 114396696 114396726 -52253570 + AT_rich Low_complexity Low_complexity 1 30 0 5 1457 1176 294 110 11 chrX 114396855 114397227 -52253069 + MTD LTR MaLR 1 409 -10 5 1457 431 322 33 19 chrX 114397356 114397568 -52252728 + Lx8 LINE L1 6250 6464 -1009 5 1457 340 118 40 105 chrX 114397577 114397653 -52252643 + MTD LTR MaLR 335 405 -14 5 1457 1525 214 40 30 chrX 114397916 114398286 -52252010 + ORR1C1 LTR MaLR 5 378 0 5 1457 1247 122 37 0 chrX 114398423 114398611 -52251685 + B2_Mm2 SINE B2 1 195 0 5 1457 642 153 0 0 chrX 114398611 114398722 -52251574 + GA-rich Low_complexity Low_complexity 2 112 0 5 1457 250 75 18 36 chrX 114399396 114399451 -52250845 + (TTTG)n Simple_repeat Simple_repeat 3 56 0 5 1457 216 0 0 0 chrX 114399507 114399531 -52250765 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1457 638 87 0 17 chrX 114399646 114399763 -52250533 + L1_Mus4 LINE L1 6516 6630 -6 5 1457 706 319 16 0 chrX 114399763 114399954 -52250342 - B3 SINE B2 -2 214 21 5 1457 267 323 10 59 chrX 114400764 114400866 -52249430 + B1F1 SINE Alu 53 149 0 5 1457 806 252 62 57 chrX 114400872 114401082 -52249214 + B3A SINE B2 6 216 0 5 1457 28 0 0 0 chrX 114401111 114401139 -52249157 + AT_rich Low_complexity Low_complexity 1 28 0 5 1457 23 33 0 0 chrX 114401269 114401299 -52248997 + AT_rich Low_complexity Low_complexity 1 30 0 5 1457 419 0 20 0 chrX 114401914 114401965 -52248331 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1457 39 0 0 0 chrX 114401996 114402035 -52248261 + AT_rich Low_complexity Low_complexity 1 39 0 5 1457 1183 68 0 0 chrX 114402037 114402184 -52248112 - B1_Mm SINE Alu 0 147 1 5 1457 4533 154 1 11 chrX 114402428 114403172 -52247124 - RMER19A LTR ERVK 0 737 1 5 1457 376 314 14 21 chrX 114403194 114403334 -52246962 + Lx8 LINE L1 6967 7105 -368 5 1457 250 268 89 44 chrX 114404002 114404092 -52246204 + RMER10A LTR ERVL 321 414 -28 5 1457 991 283 104 42 chrX 114404499 114404835 -52245461 - MTD LTR MaLR -12 407 51 5 1457 434 265 76 8 chrX 114405071 114405189 -52245107 - B4A SINE B4 0 292 167 5 1457 2046 165 4 138 chrX 114405399 114405507 -52244789 + RLTR23 LTR ERV1 11 100 -330 5 1457 273 57 0 0 chrX 114405507 114405542 -52244754 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1457 2046 165 4 138 chrX 114405542 114405918 -52244378 + RLTR23 LTR ERV1 101 430 0 5 1457 340 319 8 50 chrX 114406210 114406329 -52243967 - B4A SINE B4 -166 126 13 5 1457 1409 287 14 16 chrX 114406996 114407424 -52242872 - RodERV21-int LTR ERV1 -198 4793 4367 5 1457 4451 88 17 22 chrX 114407977 114408618 -52241678 - L1Md_F2 LINE L1 -12 6570 5933 5 1457 291 298 47 32 chrX 114408672 114408924 -52241372 - RodERV21-int LTR ERV1 -1319 5772 5675 5 1457 265 305 63 58 chrX 114409378 114409601 -52240695 - RodERV21-int LTR ERV1 -1988 5103 4880 5 1457 351 0 0 0 chrX 114410253 114410292 -52240004 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 5 1457 636 326 30 38 chrX 114410446 114410944 -52239352 - RodERV21-int LTR ERV1 -3012 4079 3586 5 1457 585 0 0 0 chrX 114411020 114411085 -52239211 + (GA)n Simple_repeat Simple_repeat 1 65 0 5 1457 2480 257 47 36 chrX 114411124 114411787 -52238509 - RodERV21-int LTR ERV1 -2273 2718 2049 5 1457 275 143 0 0 chrX 114411789 114411838 -52238458 + RMER17A LTR ERVK 1 49 -702 5 1457 4521 75 8 42 chrX 114412523 114413182 -52237114 + L1_Mus2 LINE L1 5931 6566 0 5 1457 698 258 32 142 chrX 114413470 114413786 -52236510 - RLTR9A LTR ERVK -82 286 6 5 1457 345 47 0 0 chrX 114414137 114414180 -52236116 + (TC)n Simple_repeat Simple_repeat 1 43 0 5 1457 186 222 0 0 chrX 114414244 114414298 -52235998 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1457 285 75 0 0 chrX 114414350 114414390 -52235906 + (TTATA)n Simple_repeat Simple_repeat 4 43 0 5 1457 1888 210 11 36 chrX 114414478 114414947 -52235349 - L1_Mur3 LINE L1 -1893 3987 3531 5 1457 1421 165 0 8 chrX 114414947 114415185 -52235111 - RLTR15 LTR ERVK -123 236 1 5 1457 4146 245 64 24 chrX 114415187 114416818 -52233478 - L1_Mur3 LINE L1 -3269 2611 918 5 1457 252 77 0 0 chrX 114416818 114416857 -52233439 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1457 1749 292 24 63 chrX 114416857 114417131 -52233165 - L1_Mur3 LINE L1 -6811 917 663 5 1457 207 0 0 0 chrX 114417131 114417154 -52233142 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1457 1749 292 24 63 chrX 114417154 114417239 -52233057 - L1_Mur3 LINE L1 -7066 662 576 5 1457 207 0 0 0 chrX 114418040 114418063 -52232233 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1457 22 35 0 0 chrX 114418903 114418932 -52231364 + AT_rich Low_complexity Low_complexity 1 29 0 5 1457 211 310 0 0 chrX 114419197 114419255 -52231041 - PB1D10 SINE Alu -7 110 53 5 1457 447 35 0 0 chrX 114419268 114419325 -52230971 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 1457 937 139 17 0 chrX 114419538 114419710 -52230586 + CT-rich Low_complexity Low_complexity 4 178 0 5 1457 186 71 0 0 chrX 114419711 114419739 -52230557 + (CCTTG)n Simple_repeat Simple_repeat 2 29 0 5 1457 347 318 45 9 chrX 114419821 114419932 -52230364 - ID_B1 SINE B4 -6 218 104 5 1457 338 317 88 16 chrX 114419932 114419943 -52230353 - B1F SINE Alu -3 143 13 5 1457 803 312 0 0 chrX 114419986 114420172 -52230124 + B3 SINE B2 3 188 -28 5 1457 982 105 0 7 chrX 114420311 114420465 -52229831 + L1_Mus4 LINE L1 6472 6624 -12 5 1457 1502 258 82 13 chrX 114421313 114421705 -52228591 - MTD LTR MaLR 0 419 1 5 1457 561 307 56 37 chrX 114421936 114422313 -52227983 - L1M3 LINE L1 -466 5702 5300 5 1457 357 318 115 42 chrX 114422805 114423051 -52227245 - MTE-int LTR MaLR -89 1491 1265 5 1457 217 132 0 0 chrX 114423372 114423410 -52226886 + (A)n Simple_repeat Simple_repeat 1 38 0 5 1457 428 361 144 61 chrX 114424147 114424840 -52225456 - MTE-int LTR MaLR -685 895 145 5 1457 1118 95 0 0 chrX 114425187 114425334 -52224962 + B1_Mus1 SINE Alu 2 148 0 5 1457 191 103 0 25 chrX 114425342 114425382 -52224914 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 182 769 287 121 52 chrX 114425627 114425973 -52224323 + ORR1D2 LTR MaLR 1 370 0 5 1458 767 122 12 25 chrX 114426357 114426517 -52223779 + CT-rich Low_complexity Low_complexity 3 160 0 5 1458 431 269 18 36 chrX 114426518 114426630 -52223666 - B1_Mur1 SINE Alu -30 119 10 5 1458 3808 136 128 25 chrX 114426766 114427074 -52223222 + RMER17B LTR ERVK 1 341 -617 5 1458 462 36 0 0 chrX 114427074 114427130 -52223166 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1458 3808 136 128 25 chrX 114427130 114427434 -52222862 + RMER17B LTR ERVK 342 680 -278 5 1458 261 0 0 0 chrX 114427434 114427463 -52222833 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1458 3808 136 128 25 chrX 114427463 114427568 -52222728 + RMER17B LTR ERVK 681 791 -167 5 1458 270 170 19 19 chrX 114427584 114427638 -52222658 - Lx6 LINE L1 -889 6571 6518 5 1458 1122 269 52 78 chrX 114427633 114428096 -52222200 - Lx6 LINE L1 -1180 6280 5830 5 1458 597 165 52 0 chrX 114428096 114428211 -52222085 + Lx5 LINE L1 5712 5832 -1218 5 1458 1037 89 0 27 chrX 114428465 114428615 -52221681 + B1_Mus1 SINE Alu 3 148 0 5 1458 291 389 31 8 chrX 114430175 114430302 -52219994 - RSINE1 SINE B4 -21 144 15 5 1458 3258 86 39 9 chrX 114430464 114430931 -52219365 - LTRIS2 LTR ERV1 -79 485 5 5 1458 942 207 40 13 chrX 114430934 114431159 -52219137 - RLTR1B-int LTR ERV1 -42 5021 4791 5 1458 9097 150 84 44 chrX 114431251 114433916 -52216380 - RLTR1B-int LTR ERV1 -486 2813 761 5 1458 4253 128 74 15 chrX 114433907 114434622 -52215674 - RMER16-int LTR ERVK -3960 1446 690 5 1458 822 153 73 73 chrX 114434608 114434799 -52215497 - RMER16-int LTR ERVK -5075 331 141 5 1458 629 116 0 2 chrX 114435150 114435254 -52215042 - RLTR1B-int LTR ERV1 -3011 288 139 5 1458 251 207 24 105 chrX 114435345 114435469 -52214827 - RLTR1B-int LTR ERV1 -3584 114 1 5 1458 1321 41 0 6 chrX 114435469 114435639 -52214657 - LTRIS2 LTR ERV1 0 564 396 5 1458 39 0 0 0 chrX 114435725 114435764 -52214532 + AT_rich Low_complexity Low_complexity 1 39 0 5 1458 241 342 27 141 chrX 114436140 114436324 -52213972 + RSINE1 SINE B4 3 165 0 5 1458 48 81 0 20 chrX 114436336 114436487 -52213809 + AT_rich Low_complexity Low_complexity 1 148 0 5 1458 398 333 121 5 chrX 114436588 114436778 -52213518 + ID_B1 SINE B4 2 213 -11 5 1458 783 87 0 0 chrX 114436800 114436926 -52213370 + (TAGA)n Simple_repeat Simple_repeat 1 126 0 5 1458 243 243 14 0 chrX 114436928 114436998 -52213298 + (CAGA)n Simple_repeat Simple_repeat 2 72 0 5 1458 238 306 87 6 chrX 114437144 114437305 -52212991 - L1M3 LINE L1 -274 5906 5733 5 1458 618 297 71 10 chrX 114437488 114437685 -52212611 + B3 SINE B2 3 211 -5 5 1458 331 276 67 83 chrX 114437975 114438109 -52212187 + B3A SINE B2 81 210 -6 5 1458 6882 36 4 5 chrX 114439099 114439936 -52210360 - L1Md_F3 LINE L1 -2 6582 5747 5 1458 28111 62 7 4 chrX 114439936 114443615 -52206681 + L1Md_F3 LINE L1 2066 5753 -130 5 1458 25 51 0 0 chrX 114444476 114444515 -52205781 + AT_rich Low_complexity Low_complexity 1 39 0 5 1458 629 202 265 41 chrX 114445121 114445317 -52204979 + RMER6C LTR ERVK 101 340 -350 5 1458 776 205 0 0 chrX 114445372 114445528 -52204768 - Lx2B LINE L1 -11 6989 6834 5 1458 432 97 0 0 chrX 114445537 114445599 -52204697 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 1458 1024 327 107 34 chrX 114445725 114446191 -52204105 + MLT1D LTR MaLR 6 505 0 5 1458 439 223 0 11 chrX 114446275 114446370 -52203926 - MTD LTR MaLR -14 405 312 5 1458 1453 196 46 70 chrX 114446372 114446701 -52203595 - ORR1A4 LTR MaLR -8 321 1 5 1458 1143 50 0 0 chrX 114446735 114446874 -52203422 + B1_Mus2 SINE Alu 1 139 -8 5 1458 716 222 90 12 chrX 114446965 114447143 -52203153 + Lx6 LINE L1 7036 7219 -241 5 1458 339 89 0 0 chrX 114447325 114447381 -52202915 + (A)n Simple_repeat Simple_repeat 1 56 0 5 1458 447 19 0 0 chrX 114447618 114447670 -52202626 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1458 21 36 0 0 chrX 114447788 114447816 -52202480 + AT_rich Low_complexity Low_complexity 1 28 0 6 1458 2129 256 65 10 chrX 114447847 114448430 -52201866 - Lx7 LINE L1 -371 7325 6711 6 1458 21 0 0 0 chrX 114448431 114448452 -52201844 + AT_rich Low_complexity Low_complexity 1 21 0 6 1458 393 374 48 30 chrX 114448474 114448642 -52201654 - B3A SINE B2 -27 171 1 6 1458 393 234 0 0 chrX 114448665 114448776 -52201520 + (TA)n Simple_repeat Simple_repeat 1 111 0 6 1458 183 204 0 0 chrX 114448805 114448854 -52201442 + (TA)n Simple_repeat Simple_repeat 1 49 0 6 1458 2308 145 7 10 chrX 114448858 114449261 -52201035 - Lx3A LINE L1 -797 6184 5783 6 1458 772 189 11 13 chrX 114449502 114449685 -52200611 - Lx3A LINE L1 -693 6288 6107 6 1458 3557 128 20 28 chrX 114449733 114450345 -52199951 - Lx3A LINE L1 -93 5793 5187 6 1458 7152 144 50 10 chrX 114450396 114451755 -52198541 + L1_Mur1 LINE L1 3 1427 -4459 6 1458 246 32 0 0 chrX 114451755 114451786 -52198510 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1458 2115 123 0 22 chrX 114451786 114451880 -52198416 + L1_Mur1 LINE L1 1428 1519 -4367 6 1458 3440 25 2 0 chrX 114451880 114452275 -52198021 + MTA_Mm LTR MaLR 1 396 0 6 1458 2115 123 0 22 chrX 114452275 114452321 -52197975 + L1_Mur1 LINE L1 1520 1561 -4325 6 1458 413 238 2 11 chrX 114452324 114452429 -52197867 - MTC LTR MaLR -2 419 313 6 1458 495 0 0 0 chrX 114452435 114452490 -52197806 + (TA)n Simple_repeat Simple_repeat 2 56 0 6 1458 2806 181 88 18 chrX 114453454 114453563 -52196733 + RLTR17 LTR ERVK 98 205 -487 6 1458 216 0 0 0 chrX 114453563 114453587 -52196709 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1458 2806 181 88 18 chrX 114453587 114454033 -52196263 + RLTR17 LTR ERVK 206 691 -1 6 1458 1248 320 33 5 chrX 114454111 114454510 -52195786 - MTD LTR MaLR 0 419 10 6 1458 5028 40 14 6 chrX 114454737 114455359 -52194937 - L1Md_F2 LINE L1 0 6582 5956 6 1458 669 322 5 10 chrX 114455380 114455584 -52194712 - ID_B1 SINE B4 -3 221 19 6 1458 344 326 94 52 chrX 114456367 114456600 -52193696 - L1MC1 LINE L1 -277 6056 5814 6 1458 201 39 0 0 chrX 114456826 114456852 -52193444 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1458 397 336 80 20 chrX 114457098 114457447 -52192849 - L1_Rod LINE L1 -3892 1955 1586 6 1458 332 268 135 50 chrX 114457604 114457804 -52192492 - L1MB1 LINE L1 -7 6161 5945 6 1458 2587 295 81 21 chrX 114458019 114459154 -52191142 - ERVL-B4-int LTR ERVL -3056 2658 1406 6 1458 416 60 30 0 chrX 114459602 114459669 -52190627 + (TTTA)n Simple_repeat Simple_repeat 1 69 0 6 1458 6244 127 7 8 chrX 114459669 114460652 -52189644 - Lx3A LINE L1 -15 6966 5985 6 1458 1968 137 25 53 chrX 114460652 114461007 -52189289 - L1_Mur1 LINE L1 -45 5841 5497 6 1458 297 0 0 0 chrX 114461017 114461050 -52189246 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1458 10954 110 3 34 chrX 114461055 114461793 -52188503 + L1_Mur1 LINE L1 3895 4594 -1292 6 1458 2416 75 0 0 chrX 114461793 114462111 -52188185 - L1_Mus1 LINE L1 -2 6565 6248 6 1458 10954 122 3 33 chrX 114462111 114463175 -52187121 + L1_Mur1 LINE L1 4595 5665 -575 6 1458 335 293 77 21 chrX 114463233 114463376 -52186920 - ERVL-B4-int LTR ERVL -4821 936 786 6 1458 664 243 112 11 chrX 114463673 114463852 -52186444 - Lx5 LINE L1 -8 7042 6846 6 1458 367 366 18 24 chrX 114463946 114464111 -52186185 + MTE2b LTR MaLR 8 171 -208 6 1458 612 279 81 38 chrX 114464269 114464478 -52185818 + MTE2b LTR MaLR 162 379 0 6 1458 437 243 8 67 chrX 114464539 114464658 -52185638 + PB1D9 SINE Alu 1 112 -8 6 1458 28 0 0 0 chrX 114464974 114465002 -52185294 + AT_rich Low_complexity Low_complexity 1 28 0 6 1458 772 284 24 32 chrX 114465002 114465249 -52185047 - Lx6 LINE L1 -27 7433 7189 6 1458 864 275 4 6 chrX 114465261 114465545 -52184751 - Lx5 LINE L1 -578 6882 6456 6 1458 1589 297 47 9 chrX 114465544 114466154 -52184142 + Lx5 LINE L1 5875 6731 -729 6 1458 473 262 72 33 chrX 114466207 114466483 -52183813 + L1MC LINE L1 3341 3627 -2519 6 1458 33 25 0 0 chrX 114466653 114466693 -52183603 + AT_rich Low_complexity Low_complexity 1 40 0 6 1458 3465 99 8 4 chrX 114466693 114467189 -52183107 - L1_Mus4 LINE L1 -9 6627 6130 6 1458 1831 55 0 25 chrX 114467187 114467430 -52182866 - L1Md_F3 LINE L1 -8 6576 6340 6 1458 3594 17 0 2 chrX 114467430 114467846 -52182450 + L1Md_F3 LINE L1 5920 6334 -250 6 1458 2000 182 3 5 chrX 114467840 114468210 -52182086 - L1_Mm LINE L1 -303 5580 5212 6 1458 3912 116 1 53 chrX 114468209 114469025 -52181271 - L1VL2 LINE L1 -2073 1542 818 6 1458 1718 78 0 17 chrX 114469025 114469261 -52181035 - L1_Mus1 LINE L1 0 6567 6336 6 1458 2362 208 1 76 chrX 114469261 114469774 -52180522 - L1VL2 LINE L1 -5541 817 310 6 1458 24 91 0 0 chrX 114470011 114470077 -52180219 + AT_rich Low_complexity Low_complexity 1 66 0 6 1458 295 340 75 10 chrX 114470382 114470780 -52179516 - L1M4 LINE L1 -1340 4806 4383 6 1458 27 49 0 0 chrX 114470799 114470840 -52179456 + AT_rich Low_complexity Low_complexity 1 41 0 6 1458 21 0 0 0 chrX 114472703 114472724 -52177572 + AT_rich Low_complexity Low_complexity 1 21 0 6 1458 453 331 7 35 chrX 114473056 114473200 -52177096 + B3A SINE B2 2 141 -57 6 1458 496 302 39 78 chrX 114473396 114473603 -52176693 - L1M3 LINE L1 -961 5179 4979 6 1458 1811 157 31 12 chrX 114473603 114473926 -52176370 - ORR1A4 LTR MaLR 0 329 1 6 1458 496 302 39 78 chrX 114473926 114474234 -52176062 - L1M3 LINE L1 -1162 4978 4684 6 1458 25 51 0 0 chrX 114474257 114474296 -52176000 + AT_rich Low_complexity Low_complexity 1 39 0 6 1458 230 233 17 0 chrX 114474514 114474574 -52175722 + CT-rich Low_complexity Low_complexity 2 62 0 6 1458 381 179 0 0 chrX 114474636 114474720 -52175576 + (TA)n Simple_repeat Simple_repeat 1 84 0 6 1458 406 346 82 10 chrX 114474788 114475082 -52175214 - L1M3 LINE L1 -1537 4606 4293 6 1458 304 196 53 32 chrX 114475356 114475451 -52174845 - L1M3 LINE L1 -2130 4010 3914 6 1458 433 339 106 42 chrX 114475528 114475907 -52174389 - L1M3 LINE L1 -2362 3781 3379 6 1458 2533 260 38 40 chrX 114475972 114476676 -52173620 - Lx5 LINE L1 -7 7043 6341 6 1458 7993 180 51 2 chrX 114476672 114477655 -52172641 - L1_Mur2 LINE L1 -975 4902 3870 6 1458 2535 120 3 3 chrX 114477655 114478038 -52172258 - L1_Mus2 LINE L1 -1 6565 6183 6 1458 7993 180 51 2 chrX 114478038 114478750 -52171546 - L1_Mur2 LINE L1 -2008 3869 3125 6 1458 585 321 67 78 chrX 114478804 114479222 -52171074 - Lx7 LINE L1 -2 7471 7046 6 1458 5235 111 29 9 chrX 114479254 114479427 -52170869 + L1_Mus4 LINE L1 5798 5973 -663 6 1458 4695 113 35 14 chrX 114479427 114480162 -52170134 + RMER17A LTR ERVK 1 751 0 6 1458 5235 111 29 9 chrX 114480162 114480780 -52169516 + L1_Mus4 LINE L1 5974 6605 -31 6 1458 7291 193 82 12 chrX 114480769 114481853 -52168443 - L1_Mur2 LINE L1 -2731 3146 1990 6 1458 180 0 0 0 chrX 114481853 114481873 -52168423 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 1458 7291 197 69 11 chrX 114481873 114482857 -52167439 - L1_Mur2 LINE L1 -3888 1989 944 6 1458 390 42 0 0 chrX 114482857 114482905 -52167391 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 6 1458 3218 111 78 0 chrX 114482905 114483391 -52166905 - Lx3_Mus LINE L1 -23 6986 6463 6 1458 5679 108 21 5 chrX 114483389 114484241 -52166055 + L1_Mur1 LINE L1 5012 5877 -9 6 1458 2737 173 24 2 chrX 114485007 114485499 -52164797 - Lx2 LINE L1 -2 6995 6493 6 1458 423 0 0 0 chrX 114485589 114485636 -52164660 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1458 625 271 59 21 chrX 114485669 114485959 -52164337 - L1M3 LINE L1 -3683 2457 2157 6 1458 342 0 0 0 chrX 114485963 114486001 -52164295 + (TTAA)n Simple_repeat Simple_repeat 4 41 0 6 1458 5310 97 1 0 chrX 114486651 114487464 -52162832 + L1_Mus1 LINE L1 5109 5922 -645 6 1458 384 407 14 9 chrX 114488455 114488673 -52161623 - ID_B1 SINE B4 0 224 6 6 1458 436 306 7 20 chrX 114488669 114488816 -52161480 + MTD LTR MaLR 9 153 -266 6 1458 3103 100 7 11 chrX 114488816 114489269 -52161027 - L1Md_F2 LINE L1 -12 6570 6120 6 1458 1002 68 20 0 chrX 114489269 114489416 -52160880 + L1_Mm LINE L1 1464 1613 -4270 6 1458 517 281 33 77 chrX 114489446 114489627 -52160669 + MTD LTR MaLR 177 349 -70 6 1458 417 70 0 0 chrX 114489630 114489687 -52160609 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1458 252 333 0 0 chrX 114491938 114492022 -52158274 + ID_B1 SINE B4 135 218 -6 6 1458 591 299 25 25 chrX 114492576 114492778 -52157518 - B3 SINE B2 -11 205 4 6 1458 31 26 0 0 chrX 114494255 114494293 -52156003 + AT_rich Low_complexity Low_complexity 1 38 0 6 1458 378 0 0 0 chrX 114494960 114495002 -52155294 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1458 256 331 92 30 chrX 114495450 114495581 -52154715 + MTE2a LTR MaLR 5 143 -236 6 1458 398 130 18 18 chrX 114495818 114495928 -52154368 + (TA)n Simple_repeat Simple_repeat 2 111 0 6 1458 3189 103 27 8 chrX 114496029 114496511 -52153785 - L1_Mus2 LINE L1 0 6566 6076 6 1458 305 336 8 0 chrX 114496524 114496655 -52153641 + MERVL_2A-int LTR ERVL 144 275 -5486 6 1458 326 293 189 34 chrX 114496703 114496952 -52153344 + L1VL2 LINE L1 4 437 -5981 6 1458 407 246 169 22 chrX 114496962 114497145 -52153151 + L1VL4 LINE L1 512 721 -5798 6 1458 12797 154 5 66 chrX 114497138 114497878 -52152418 + L1VL4 LINE L1 628 1329 -2488 6 1458 1084 102 0 7 chrX 114497878 114498026 -52152270 + B1_Mm SINE Alu 1 147 0 6 1458 12797 118 8 27 chrX 114498026 114500000 -52150296 + L1VL4 LINE L1 1330 3263 -554 6 1458 10133 112 4 38 chrX 114500001 114500517 -52149779 + L1_Mm LINE L1 3363 3846 -2037 1 1458 6221 64 12 2 chrX 114500517 114501317 -52148979 - RLTR13C2 LTR ERVK 0 808 1 2 1458 10133 112 4 38 chrX 114501317 114502225 -52148071 + L1_Mm LINE L1 3847 4734 -1149 1 1458 243 0 0 0 chrX 114502225 114502252 -52148044 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1458 10133 112 4 38 chrX 114502252 114502501 -52147795 + L1_Mm LINE L1 4735 4981 -902 1 1458 1162 144 40 13 chrX 114502501 114502726 -52147570 + Lx3_Mus LINE L1 6779 7009 0 4 1458 1203 309 61 82 chrX 114502752 114503681 -52146615 + MERVL-int LTR ERVL 255 1164 -4321 5 1458 455 293 120 10 chrX 114504330 114504668 -52145628 - L1MA4 LINE L1 -339 5961 5595 6 1458 26 50 0 0 chrX 114504747 114504787 -52145509 + AT_rich Low_complexity Low_complexity 1 40 0 7 1458 454 275 129 10 chrX 114504984 114505186 -52145110 - RMER20B LTR ERVK -215 412 187 8 1458 456 342 0 0 chrX 114505613 114505759 -52144537 + RMER15 LTR ERVL 377 522 -53 9 1458 1316 316 87 32 chrX 114506561 114507091 -52143205 - Lx5 LINE L1 -9 7041 6483 1 1458 1252 244 169 10 chrX 114507104 114507327 -52142969 - Lx5 LINE L1 -703 6347 6057 1 1458 1185 63 0 0 chrX 114507327 114507486 -52142810 + (TCTCCC)n Simple_repeat Simple_repeat 5 163 0 1 1458 1252 242 205 11 chrX 114507486 114507762 -52142534 - Lx5 LINE L1 -1404 6056 5737 1 1458 24 0 0 0 chrX 114508190 114508214 -52142082 + AT_rich Low_complexity Low_complexity 1 24 0 1 1458 622 308 0 41 chrX 114508323 114508543 -52141753 - B3 SINE B2 -5 211 1 1 1458 505 300 23 8 chrX 114508672 114508803 -52141493 - ID_B1 SINE B4 -3 221 89 1 1458 5897 115 35 70 chrX 114508828 114510456 -52139840 + L1_Mus3 LINE L1 5071 6636 -2 1 1458 290 189 0 0 chrX 114510743 114510796 -52139500 + Lx6 LINE L1 7016 7068 -392 1 1458 267 31 0 0 chrX 114510832 114510864 -52139432 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 1 1458 180 0 0 0 chrX 114510864 114510884 -52139412 + (CCAA)n Simple_repeat Simple_repeat 4 23 0 1 1458 280 233 40 14 chrX 114510886 114510960 -52139336 + Lx6 LINE L1 7076 7151 -309 1 1458 300 119 0 0 chrX 114510960 114511019 -52139277 + (T)n Simple_repeat Simple_repeat 1 59 0 1 1458 903 298 12 27 chrX 114511047 114511306 -52138990 + Lx6 LINE L1 7180 7434 -26 1 1458 351 350 147 10 chrX 114511374 114511666 -52138630 - Lx8 LINE L1 -2 7471 7140 2 1458 1603 260 12 13 chrX 114511685 114512086 -52138210 - MTD LTR MaLR -15 404 18 2 1458 222 37 0 0 chrX 114512090 114512117 -52138179 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1458 457 322 32 16 chrX 114512168 114512354 -52137942 - Lx8 LINE L1 -449 7024 6836 2 1458 25 0 0 0 chrX 114512665 114512690 -52137606 + AT_rich Low_complexity Low_complexity 1 25 0 2 1458 1796 191 55 3 chrX 114512749 114513116 -52137180 + ORR1B1 LTR MaLR 9 394 0 2 1458 728 339 117 16 chrX 114513116 114513631 -52136665 - Lx8 LINE L1 -738 6735 6169 2 1458 24 0 0 0 chrX 114515164 114515188 -52135108 + AT_rich Low_complexity Low_complexity 1 24 0 2 1458 378 151 0 0 chrX 114515240 114515313 -52134983 + (TA)n Simple_repeat Simple_repeat 2 74 0 2 1458 4236 67 13 4 chrX 114515966 114516522 -52133774 - L1Md_F2 LINE L1 -4 6578 6018 2 1458 273 305 79 7 chrX 114517106 114517258 -52133038 - Tigger7 DNA MER2_type -48 2443 2281 2 1458 759 325 38 56 chrX 114517479 114517923 -52132373 + Lx7 LINE L1 6421 6856 -840 2 1458 6987 69 19 15 chrX 114517898 114518630 -52131666 + L1_Mus2 LINE L1 5606 6351 -215 3 1458 2792 96 13 2 chrX 114518630 114519026 -52131270 - MTB LTR MaLR 0 400 1 3 1458 6987 69 19 15 chrX 114519026 114519247 -52131049 + L1_Mus2 LINE L1 6352 6563 -3 3 1458 216 0 0 0 chrX 114519273 114519297 -52130999 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1458 529 347 16 58 chrX 114519297 114519717 -52130579 + Lx7 LINE L1 6842 7253 -220 2 1458 307 41 0 39 chrX 114520144 114520195 -52130101 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1458 3651 34 11 13 chrX 114520495 114520947 -52129349 - L1Md_F3 LINE L1 -57 6527 6077 3 1458 1406 171 15 4 chrX 114520915 114521185 -52129111 + L1Md_A LINE L1 647 919 -5805 3 1458 673 199 99 0 chrX 114522385 114522536 -52127760 + URR1A DNA MER1_type 58 223 -3 3 1458 226 288 139 36 chrX 114522536 114522566 -52127730 - CYRA11_Mm Unknown Y-chromosome -428 189 143 3 1458 572 239 44 7 chrX 114522566 114522701 -52127595 + B1_Mus1 SINE Alu 5 144 -4 3 1458 226 288 139 36 chrX 114522701 114522712 -52127584 - CYRA11_Mm Unknown Y-chromosome -475 142 132 3 1458 250 75 18 36 chrX 114522712 114522767 -52127529 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 3 1458 207 188 0 0 chrX 114522767 114522815 -52127481 + (CAA)n Simple_repeat Simple_repeat 2 49 0 4 1458 2562 84 24 8 chrX 114522845 114523228 -52127068 + L1Md_F2 LINE L1 6194 6582 0 4 1458 32 0 0 0 chrX 114523568 114523600 -52126696 + AT_rich Low_complexity Low_complexity 1 32 0 4 1458 368 267 88 92 chrX 114523958 114524197 -52126099 + MT2B2 LTR ERVL 27 264 -320 4 1458 1006 67 7 24 chrX 114524088 114524237 -52126059 + B1_Mus1 SINE Alu 8 148 0 4 1458 473 77 42 25 chrX 114524237 114524357 -52125939 + (CAAAA)n Simple_repeat Simple_repeat 1 122 0 4 1458 3019 147 16 10 chrX 114524749 114524926 -52125370 - Lx3A LINE L1 -888 6093 5911 4 1458 720 0 0 0 chrX 114524926 114525006 -52125290 + (TTC)n Simple_repeat Simple_repeat 2 81 0 4 1458 7210 116 16 8 chrX 114525006 114526161 -52124135 - Lx3A LINE L1 -1071 5910 4749 4 1458 5232 144 19 5 chrX 114526162 114527035 -52123261 + Lx3A LINE L1 6090 6975 -6 4 1458 21 57 0 0 chrX 114527036 114527071 -52123225 + AT_rich Low_complexity Low_complexity 1 35 0 4 1458 2761 265 100 21 chrX 114527077 114527989 -52122307 - Lx9 LINE L1 -309 7335 6352 5 1458 324 0 0 0 chrX 114528013 114528049 -52122247 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1458 477 0 0 0 chrX 114528049 114528101 -52122195 + (GA)n Simple_repeat Simple_repeat 2 54 0 5 1458 1754 229 58 39 chrX 114528129 114528908 -52121388 - Lx9 LINE L1 -1398 6246 5315 5 1458 558 261 21 28 chrX 114528927 114529069 -52121227 - B1_Mur3 SINE Alu 0 149 9 5 1458 342 184 110 16 chrX 114529075 114529202 -52121094 - Lx9 LINE L1 -527 5320 5182 5 1458 3192 85 7 0 chrX 114529202 114529664 -52120632 - L1_Mus1 LINE L1 0 6567 6134 5 1458 1317 102 0 0 chrX 114529664 114529850 -52120446 + L1_Mus1 LINE L1 5825 6010 -557 5 1458 3882 241 31 52 chrX 114529845 114531247 -52119049 - Lx9 LINE L1 -652 5195 3823 5 1458 407 335 100 7 chrX 114532638 114532788 -52117508 - MTEa LTR MaLR 0 379 216 5 1458 2725 281 70 22 chrX 114532878 114533900 -52116396 + Lx9 LINE L1 6327 7396 -248 5 1458 524 324 34 6 chrX 114534171 114534497 -52115799 - L1M2 LINE L1 -2870 3273 2939 5 1458 246 65 0 0 chrX 114534494 114534525 -52115771 - Lx3C LINE L1 -483 6493 6463 5 1458 480 171 85 7 chrX 114535371 114535487 -52114809 - Lx9 LINE L1 -27 7617 7498 5 1458 297 0 0 0 chrX 114535487 114535520 -52114776 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1458 480 171 85 7 chrX 114535520 114535544 -52114752 - Lx9 LINE L1 -147 7497 7466 5 1458 1195 180 96 40 chrX 114535551 114535685 -52114611 - RMER6C LTR ERVK -22 668 533 6 1458 439 43 29 14 chrX 114535685 114535755 -52114541 + (TTTA)n Simple_repeat Simple_repeat 2 72 0 6 1458 1195 180 96 40 chrX 114535755 114535944 -52114352 - RMER6C LTR ERVK -158 532 327 6 1458 602 191 3 0 chrX 114535923 114536063 -52114233 - RMER6C LTR ERVK -582 174 1 6 1458 683 271 83 111 chrX 114536424 114536810 -52113486 - MTE2a LTR MaLR -4 375 1 6 1458 22 0 0 0 chrX 114537423 114537445 -52112851 + AT_rich Low_complexity Low_complexity 1 22 0 6 1458 21 0 0 0 chrX 114539170 114539191 -52111105 + AT_rich Low_complexity Low_complexity 1 21 0 6 1458 279 0 0 0 chrX 114539776 114539807 -52110489 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 6 1458 21357 70 3 1 chrX 114540088 114543657 -52106639 - L1Md_F2 LINE L1 -2 6580 3006 6 1458 238 161 0 61 chrX 114543777 114543843 -52106453 + T-rich Low_complexity Low_complexity 4 65 0 6 1458 2428 95 0 31 chrX 114544279 114544639 -52105657 + L1Md_F2 LINE L1 6220 6568 -14 6 1458 2860 91 8 2 chrX 114545806 114546204 -52104092 + MTB LTR MaLR 1 400 0 7 1458 5771 144 18 88 chrX 114546206 114547384 -52102912 + MTB-int LTR MaLR 3 1097 -1 7 1458 2879 102 0 0 chrX 114547385 114547785 -52102511 + MTB LTR MaLR 1 400 0 7 1458 2868 190 20 8 chrX 114547937 114548522 -52101774 - L1_Mur2 LINE L1 -875 5002 4411 7 1458 5537 196 45 15 chrX 114548537 114550017 -52100279 + Lx2 LINE L1 5400 6974 -23 7 1458 1105 97 0 0 chrX 114550104 114550249 -52100047 - B1_Mus1 SINE Alu -2 146 2 7 1458 374 347 27 20 chrX 114550275 114550290 -52100006 - B3 SINE B2 -1 215 201 7 1458 396 0 0 0 chrX 114550290 114550334 -52099962 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 1458 426 39 0 0 chrX 114550335 114550387 -52099909 + (CA)n Simple_repeat Simple_repeat 1 52 0 7 1458 374 347 27 20 chrX 114550387 114550519 -52099777 - B3 SINE B2 -16 200 65 7 1458 1002 99 7 7 chrX 114550531 114550673 -52099623 + B1_Mus2 SINE Alu 1 142 -5 7 1458 513 305 25 25 chrX 114550728 114550930 -52099366 + B3 SINE B2 4 205 -11 7 1458 329 340 115 0 chrX 114552141 114552152 -52098144 - B3 SINE B2 -3 213 203 7 1458 405 95 0 0 chrX 114552152 114552215 -52098081 + (ATTG)n Simple_repeat Simple_repeat 2 64 0 8 1458 329 340 115 0 chrX 114552215 114552359 -52097937 - B3 SINE B2 -14 202 41 7 1458 21 0 0 0 chrX 114552718 114552739 -52097557 + AT_rich Low_complexity Low_complexity 1 21 0 8 1458 303 71 0 0 chrX 114553054 114553096 -52097200 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 8 1458 21 0 0 0 chrX 114554334 114554355 -52095941 + AT_rich Low_complexity Low_complexity 1 21 0 8 1459 237 326 0 115 chrX 114557268 114557372 -52092924 - B1F SINE Alu -34 115 21 8 1459 2582 99 81 8 chrX 114557747 114558144 -52092152 - L1_Mus3 LINE L1 -27 6611 6186 8 1459 1921 271 42 17 chrX 114558579 114559153 -52091143 - Lx9 LINE L1 -357 7287 6700 8 1459 8257 106 1 4 chrX 114559556 114561522 -52088774 - L1_Mus2 LINE L1 0 6566 4609 8 1459 7175 43 1 0 chrX 114561531 114562395 -52087901 - L1Md_T LINE L1 0 6582 5718 8 1459 8041 21 1 0 chrX 114562404 114563511 -52086785 + L1Md_T LINE L1 4953 6060 -522 8 1459 401 59 0 0 chrX 114563504 114563555 -52086741 - L1Md_F3 LINE L1 -805 5779 5729 9 1459 31143 38 0 11 chrX 114563558 114568143 -52082153 - L1Md_T LINE L1 -875 5008 477 8 1459 20677 146 18 21 chrX 114568150 114572431 -52077865 - L1_Mus2 LINE L1 -1269 4614 329 8 1459 23 33 0 0 chrX 114572623 114572653 -52077643 + AT_rich Low_complexity Low_complexity 1 30 0 9 1459 1001 143 0 0 chrX 114573386 114573533 -52076763 + B1_Mus1 SINE Alu 2 148 0 9 1459 402 115 0 0 chrX 114573533 114573594 -52076702 + (GAAA)n Simple_repeat Simple_repeat 4 64 0 9 1459 2466 203 28 104 chrX 114574711 114575452 -52074844 - RMER6C LTR ERVK -5 685 1 9 1459 1005 254 168 71 chrX 114577022 114577353 -52072943 + MTD LTR MaLR 1 365 -54 9 1459 597 123 17 9 chrX 114577353 114577468 -52072828 - Lx2 LINE L1 0 6997 6882 9 1459 1005 254 168 71 chrX 114577468 114577518 -52072778 + MTD LTR MaLR 366 419 0 9 1459 797 264 52 24 chrX 114577623 114577836 -52072460 + MTD LTR MaLR 184 402 -17 9 1459 2571 153 0 9 chrX 114578186 114578621 -52071675 - L1_Mm LINE L1 -970 4913 4483 9 1459 7421 86 5 1 chrX 114578593 114580126 -52070170 + L1_Mus1 LINE L1 5028 6567 0 9 1459 228 67 0 0 chrX 114580129 114580159 -52070137 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 1 1459 2428 177 17 2 chrX 114580176 114580595 -52069701 + RLTR21 LTR ERVK 1 425 -1147 1 1459 247 105 70 39 chrX 114580628 114580757 -52069539 + (TA)n Simple_repeat Simple_repeat 1 133 0 1 1459 2940 109 82 11 chrX 114580765 114581239 -52069057 - Lx3_Mus LINE L1 0 7009 6502 1 1459 2936 168 14 32 chrX 114581248 114581833 -52068463 + RLTR21 LTR ERVK 520 1093 -479 1 1459 387 0 0 0 chrX 114581836 114581879 -52068417 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1459 2332 218 65 113 chrX 114581890 114582358 -52067938 + RLTR21 LTR ERVK 1051 1308 -264 1 1459 216 0 0 0 chrX 114582358 114582382 -52067914 + (TC)n Simple_repeat Simple_repeat 2 25 0 1 1459 2332 174 50 93 chrX 114582382 114582659 -52067637 + RLTR21 LTR ERVK 1289 1572 0 1 1459 323 349 102 39 chrX 114582675 114583057 -52067239 - L1M4 LINE L1 -517 5667 5262 1 1459 1512 239 21 6 chrX 114583226 114583559 -52066737 + ORR1C1 LTR MaLR 41 378 0 1 1459 468 0 0 0 chrX 114583843 114583895 -52066401 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 1459 633 27 0 0 chrX 114583895 114583969 -52066327 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 1459 464 214 10 20 chrX 114584001 114584101 -52066195 - MTC LTR MaLR 0 421 323 1 1459 363 205 0 49 chrX 114584106 114584188 -52066108 - MTC LTR MaLR -335 86 9 1 1459 274 374 27 27 chrX 114584365 114584475 -52065821 - ID_B1 SINE B4 -110 114 5 1 1459 315 122 0 0 chrX 114584739 114584788 -52065508 + (T)n Simple_repeat Simple_repeat 1 49 0 1 1459 938 105 8 0 chrX 114584790 114584923 -52065373 - B1_Mm SINE Alu 0 147 14 1 1459 6370 52 0 1 chrX 114584923 114585717 -52064579 - L1Md_F2 LINE L1 -493 5390 4598 1 1459 1618 42 0 0 chrX 114585712 114585902 -52064394 + L1Md_F2 LINE L1 5397 5586 -297 1 1459 7825 58 1 1 chrX 114585903 114586886 -52063410 + L1Md_F2 LINE L1 5588 6570 -12 1 1459 291 143 143 0 chrX 114586926 114586975 -52063321 - tRNA-Val-GTY tRNA tRNA -3 73 18 1 1459 358 279 147 12 chrX 114587017 114587180 -52063116 - MTD LTR MaLR 0 419 235 1 1459 415 302 21 28 chrX 114587164 114587307 -52062989 + B4 SINE B4 40 181 -111 1 1459 533 347 26 22 chrX 114587274 114587501 -52062795 - MTD LTR MaLR -191 228 1 1 1459 355 258 39 24 chrX 114587523 114587650 -52062646 - L1M2 LINE L1 -2401 3742 3614 1 1459 639 0 0 0 chrX 114587884 114587955 -52062341 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 1 1459 25 0 0 0 chrX 114587985 114588010 -52062286 + AT_rich Low_complexity Low_complexity 1 25 0 1 1459 1165 68 7 0 chrX 114588045 114588192 -52062104 + B1_Mus1 SINE Alu 1 148 0 1 1459 539 42 40 30 chrX 114588192 114588291 -52062005 + (CAAAA)n Simple_repeat Simple_repeat 1 100 0 1 1459 450 0 0 0 chrX 114588359 114588409 -52061887 + (TTTC)n Simple_repeat Simple_repeat 4 53 0 1 1459 8014 130 44 17 chrX 114588410 114589739 -52060557 - Lx3A LINE L1 -16 6965 5602 1 1459 2683 115 0 9 chrX 114589737 114590168 -52060128 + Lx LINE L1 3267 3693 -2193 1 1459 3036 46 155 2 chrX 114590192 114590604 -52059692 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1459 3367 82 30 25 chrX 114590605 114591488 -52058808 + IAPEz-int LTR ERVK 9 662 -5819 1 1459 2720 58 0 3 chrX 114591488 114591831 -52058465 + IAPEz-int LTR ERVK 1359 1700 -4781 1 1459 6346 56 13 12 chrX 114591826 114592652 -52057644 + IAPEz-int LTR ERVK 5653 6479 -2 1 1459 3187 38 133 2 chrX 114592654 114593074 -52057222 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1459 3907 118 20 3 chrX 114593074 114593685 -52056611 + Lx LINE L1 4945 5565 -321 1 1459 2969 161 37 15 chrX 114593681 114593838 -52056458 - Lx LINE L1 -136 6518 6347 1 1459 432 0 0 0 chrX 114593838 114593886 -52056410 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1459 2969 161 37 15 chrX 114593886 114594247 -52056049 - Lx LINE L1 -308 6346 5990 1 1459 2695 75 13 16 chrX 114594247 114594628 -52055668 + Lx LINE L1 5614 5993 -661 1 1459 1062 90 14 0 chrX 114594792 114594937 -52055359 + B1_Mus1 SINE Alu 2 148 0 1 1459 250 24 23 45 chrX 114594937 114594981 -52055315 + (CAAAAA)n Simple_repeat Simple_repeat 6 48 0 1 1459 346 214 101 0 chrX 114595044 114595133 -52055163 + ORR1D1 LTR MaLR 268 365 -9 1 1459 1811 60 0 8 chrX 114596131 114596368 -52053928 - L1Md_F2 LINE L1 -3 6579 6345 1 1459 3001 54 0 0 chrX 114596368 114596736 -52053560 + L1Md_F2 LINE L1 5924 6291 -291 1 1459 203 286 32 0 chrX 114597200 114597263 -52053033 + (TTG)n Simple_repeat Simple_repeat 1 65 0 1 1459 252 77 0 0 chrX 114597276 114597315 -52052981 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1459 26 30 0 0 chrX 114597650 114597683 -52052613 + AT_rich Low_complexity Low_complexity 1 33 0 1 1459 259 293 92 57 chrX 114597743 114597971 -52052325 - L1ME1 LINE L1 -162 6017 5782 1 1459 1401 299 68 71 chrX 114597983 114598602 -52051694 + Lx6 LINE L1 6650 7266 -194 1 1459 210 37 0 0 chrX 114598602 114598629 -52051667 + (TTATA)n Simple_repeat Simple_repeat 2 28 0 1 1459 25 63 0 16 chrX 114598948 114598995 -52051301 + AT_rich Low_complexity Low_complexity 1 47 0 1 1459 5544 157 22 4 chrX 114598995 114599936 -52050360 - RMER17B LTR ERVK 0 958 1 1 1459 25 63 0 16 chrX 114599936 114599952 -52050344 + AT_rich Low_complexity Low_complexity 1 16 0 1 1459 882 304 105 23 chrX 114599978 114601060 -52049236 - L1ME1 LINE L1 -1081 5065 3867 1 1459 441 0 0 0 chrX 114601444 114601493 -52048803 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 1459 1027 192 126 17 chrX 114601667 114601953 -52048343 + RMER6C LTR ERVK 9 365 -325 1 1459 240 59 0 0 chrX 114602038 114602072 -52048224 + (GAGTG)n Simple_repeat Simple_repeat 2 35 0 1 1459 180 0 0 0 chrX 114602146 114602166 -52048130 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1459 1462 166 40 85 chrX 114602166 114602495 -52047801 + RMER6C LTR ERVK 377 690 0 1 1459 2146 248 75 47 chrX 114602553 114602755 -52047541 - Lx7 LINE L1 -1341 6355 6174 1 1459 692 12 12 0 chrX 114602755 114602840 -52047456 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 1 1459 3681 245 110 15 chrX 114602840 114604675 -52045621 - Lx7 LINE L1 -1523 6173 4016 1 1459 393 58 0 0 chrX 114604810 114604862 -52045434 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1459 189 0 0 0 chrX 114604862 114604882 -52045414 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1459 21 0 0 0 chrX 114604916 114604937 -52045359 + AT_rich Low_complexity Low_complexity 1 21 0 1 1459 7262 85 5 3 chrX 114606349 114607389 -52042907 - L1_Mus2 LINE L1 0 6566 5524 1 1459 2880 120 5 2 chrX 114607421 114607559 -52042737 + L1_Mm LINE L1 4592 4729 -1154 1 1459 351 0 0 0 chrX 114607559 114607598 -52042698 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1459 2880 120 5 2 chrX 114607598 114607901 -52042395 + L1_Mm LINE L1 4730 5034 -849 1 1459 3802 194 34 1 chrX 114607899 114608627 -52041669 + Lx2B LINE L1 5935 6686 -314 1 1459 5290 114 47 64 chrX 114608628 114608904 -52041392 - RLTR13D6 LTR ERVK 0 902 628 1 1459 1304 157 60 32 chrX 114608904 114609187 -52041109 + L1Md_A LINE L1 6280 6570 -12 1 1459 5290 114 47 64 chrX 114609187 114609828 -52040468 - RLTR13D6 LTR ERVK -275 627 1 1 1459 1155 238 80 47 chrX 114609831 114610131 -52040165 + Lx2B LINE L1 6684 6993 -7 1 1459 261 0 0 0 chrX 114610151 114610180 -52040116 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1 1459 234 347 174 0 chrX 114610280 114610378 -52039918 - B1F SINE Alu -21 128 14 1 1459 454 266 65 6 chrX 114610384 114610554 -52039742 + L1MA4A LINE L1 5052 5231 -912 1 1459 522 292 62 122 chrX 114610740 114611176 -52039120 + L1MA4A LINE L1 5480 5889 -414 1 1459 244 111 37 0 chrX 114611579 114611633 -52038663 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 1459 791 182 13 0 chrX 114612349 114612503 -52037793 - L1_Mur1 LINE L1 -317 5569 5414 1 1459 2172 254 60 26 chrX 114612502 114613120 -52037176 + Lx2B LINE L1 6344 6982 -18 1 1459 207 0 0 0 chrX 114613956 114613979 -52036317 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1459 483 319 63 50 chrX 114614219 114614457 -52035839 + MER34A LTR ERV1 311 551 -20 1 1459 244 318 136 86 chrX 114615078 114615298 -52034998 + MIR SINE MIR 28 258 -4 1 1459 3451 159 52 0 chrX 114615694 114616290 -52034006 - Lx3C LINE L1 0 6976 6350 1 1459 571 319 6 0 chrX 114616545 114616705 -52033591 + RSINE1 SINE B4 5 165 0 1 1459 330 143 0 0 chrX 114617559 114617636 -52032660 + (A)n Simple_repeat Simple_repeat 1 77 0 1 1459 21 36 0 0 chrX 114617949 114617977 -52032319 + AT_rich Low_complexity Low_complexity 1 28 0 1 1459 456 241 8 25 chrX 114618216 114618306 -52031990 + RMER6C LTR ERVK 239 329 -361 1 1459 2812 133 9 13 chrX 114618306 114618770 -52031526 + Lx LINE L1 6185 6646 -8 1 1459 456 241 8 25 chrX 114618770 114618798 -52031498 + RMER6C LTR ERVK 330 355 -335 1 1459 611 290 22 27 chrX 114619292 114619515 -52030781 - Lx6 LINE L1 -1 7459 7238 1 1459 309 212 175 0 chrX 114619657 114619737 -52030559 + RMER6B LTR ERVK 1 94 -367 1 1459 327 118 238 30 chrX 114619737 114619836 -52030460 + Lx2 LINE L1 6891 6996 -1 1 1459 574 163 152 66 chrX 114619836 114619987 -52030309 + RMER6B LTR ERVK 298 461 0 1 1459 1652 206 6 19 chrX 114620001 114620363 -52029933 - RLTR15 LTR ERVK 0 359 3 1 1459 350 236 0 0 chrX 114620364 114620436 -52029860 - tRNA-Lys-AAG tRNA tRNA -4 72 1 1 1459 361 273 17 88 chrX 114620498 114620651 -52029645 + L1_Mur3 LINE L1 2839 2980 -2867 1 1459 1321 24 0 0 chrX 114620651 114620816 -52029480 - L1Md_F3 LINE L1 -14 6570 6406 1 1459 361 273 17 88 chrX 114620816 114620843 -52029453 + L1_Mur3 LINE L1 2981 3006 -2841 1 1459 1187 189 98 37 chrX 114620846 114621143 -52029153 + RLTR46 LTR ERVK 1 315 -5 1 1459 366 297 102 33 chrX 114621258 114621561 -52028735 + L1_Mur3 LINE L1 3153 3496 -2351 1 1459 1362 233 106 168 chrX 114621574 114622342 -52027954 - RMER6D LTR ERVK 0 720 1 1 1459 331 316 14 46 chrX 114622349 114622565 -52027731 + L1M2 LINE L1 3526 3734 -2409 1 1459 4042 277 69 124 chrX 114622611 114623348 -52026948 - Lx6 LINE L1 -13 7447 6759 1 1459 1296 79 0 0 chrX 114623348 114623526 -52026770 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1 1459 4042 256 66 84 chrX 114623526 114625028 -52025268 - Lx6 LINE L1 -702 6758 5311 1 1459 330 26 0 0 chrX 114625028 114625067 -52025229 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 1459 563 27 14 0 chrX 114625067 114625139 -52025157 + (TA)n Simple_repeat Simple_repeat 1 74 0 1 1459 3607 220 62 12 chrX 114625139 114625491 -52024805 - Lx6 LINE L1 -570 5310 4940 1 1459 579 81 0 0 chrX 114625541 114625627 -52024669 + (TG)n Simple_repeat Simple_repeat 1 86 0 1 1459 5253 59 12 0 chrX 114625639 114626322 -52023974 - L1Md_F2 LINE L1 0 6582 5892 1 1459 22 0 0 0 chrX 114626475 114626497 -52023799 + AT_rich Low_complexity Low_complexity 1 22 0 1 1459 822 222 5 0 chrX 114626523 114626708 -52023588 - Lx6 LINE L1 -943 4937 4752 1 1459 283 340 51 25 chrX 114626707 114626864 -52023432 + Lx8 LINE L1 6987 7147 -326 1 1459 1574 170 22 57 chrX 114627059 114627377 -52022919 - ORR1A2 LTR MaLR -8 319 13 1 1459 219 329 13 38 chrX 114627969 114628048 -52022248 - ID4 SINE ID -2 81 5 1 1459 633 27 0 0 chrX 114628170 114628245 -52022051 + (TTTC)n Simple_repeat Simple_repeat 1 75 0 1 1459 7471 136 39 22 chrX 114628245 114629793 -52020503 - Lx3_Mus LINE L1 -22 6987 5412 1 1459 11986 111 23 1 chrX 114629791 114632308 -52017988 + L1_Mus2 LINE L1 3985 6565 -1 1 1459 7942 132 8 9 chrX 114632320 114633611 -52016685 - Lx3_Mus LINE L1 -461 5425 4137 1 1459 3255 92 6 2 chrX 114633610 114634077 -52016219 + Lx3_Mus LINE L1 3647 4115 -1771 1 1459 485 276 0 0 chrX 114635146 114635262 -52015034 - PB1D9 SINE Alu -3 117 2 1 1459 25 0 0 0 chrX 114635571 114635596 -52014700 + AT_rich Low_complexity Low_complexity 1 25 0 1 1459 308 218 0 0 chrX 114635985 114636040 -52014256 - ID SINE ID -165 59 5 1 1459 293 250 29 0 chrX 114637129 114637197 -52013099 - ERVL-B4-int LTR ERVL -1194 4520 4451 1 1459 454 265 70 10 chrX 114637204 114637346 -52012950 + MTD LTR MaLR 268 405 -14 1 1459 251 333 37 0 chrX 114638299 114638407 -52011889 + PB1D10 SINE Alu 5 116 -1 1 1459 23 0 0 0 chrX 114638928 114638951 -52011345 + AT_rich Low_complexity Low_complexity 1 23 0 2 1459 2113 109 11 5 chrX 114639349 114639725 -52010571 + L1_Mus2 LINE L1 6117 6632 -6 2 1459 213 65 0 0 chrX 114639752 114639783 -52010513 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1459 194 57 0 54 chrX 114639996 114640033 -52010263 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2 1459 713 316 131 30 chrX 114641445 114641758 -52008538 - MTD LTR MaLR -40 379 1 2 1459 607 248 16 0 chrX 114642113 114642234 -52008062 + ETnERV2-int LTR ERVK 7070 7192 -214 2 1459 27 29 0 0 chrX 114643143 114643177 -52007119 + AT_rich Low_complexity Low_complexity 1 34 0 2 1459 780 109 39 0 chrX 114643454 114643582 -52006714 - L1_Mus2 LINE L1 0 6566 6434 2 1459 878 60 0 8 chrX 114643582 114643699 -52006597 + L1_Mus2 LINE L1 6331 6446 -120 2 1459 26 0 0 0 chrX 114645656 114645682 -52004614 + AT_rich Low_complexity Low_complexity 1 26 0 2 1459 1483 40 0 0 chrX 114646200 114646376 -52003920 + L1Md_T LINE L1 5411 5586 -297 2 1459 8350 34 0 0 chrX 114646376 114647372 -52002924 + L1Md_T LINE L1 5587 6582 0 2 1459 1050 140 0 0 chrX 114647532 114647711 -52002585 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 2 1459 282 56 0 0 chrX 114648550 114648586 -52001710 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1459 492 18 0 0 chrX 114648586 114648642 -52001654 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 1459 4035 158 0 0 chrX 114649143 114649787 -52000509 + Lx LINE L1 5666 6309 -345 2 1459 12896 118 12 19 chrX 114649785 114651854 -51998442 + L1_Mur1 LINE L1 3833 5886 0 2 1459 1486 153 47 7 chrX 114651858 114652135 -51998161 + L1_Mus3 LINE L1 5180 5467 -416 2 1459 2276 81 3 3 chrX 114652127 114652437 -51997859 + L1_Mus1 LINE L1 6256 6565 -2 2 1459 2127 138 30 5 chrX 114652459 114652831 -51997465 + Lx2B LINE L1 6610 6990 -10 2 1459 6910 109 29 3 chrX 114652844 114654005 -51996291 + L1_Mus3 LINE L1 5441 6632 -6 2 1459 198 0 0 0 chrX 114654098 114654120 -51996176 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1459 1404 299 91 45 chrX 114654120 114654771 -51995525 + Lx8 LINE L1 6430 7110 -363 2 1459 21 0 0 0 chrX 114655519 114655540 -51994756 + AT_rich Low_complexity Low_complexity 1 21 0 2 1459 234 0 0 0 chrX 114655718 114655744 -51994552 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 1459 529 330 19 5 chrX 114655841 114656051 -51994245 + B3 SINE B2 4 216 0 2 1459 567 234 21 0 chrX 114656095 114656236 -51994060 + ORR1C1 LTR MaLR 2 145 -233 2 1459 513 0 0 0 chrX 114656236 114656293 -51994003 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 2 1459 1749 202 36 11 chrX 114656294 114656650 -51993646 - RMER4A LTR ERVK -94 372 8 2 1459 2810 251 47 18 chrX 114656665 114657370 -51992926 + ORR1C1-int LTR MaLR 772 1496 -13 2 1459 1558 218 43 24 chrX 114657378 114657749 -51992547 + ORR1C1 LTR MaLR 1 378 0 2 1459 1747 112 0 15 chrX 114659917 114660190 -51990106 + L1_Mus4 LINE L1 6363 6631 -5 2 1459 25 83 0 0 chrX 114660230 114660290 -51990006 + AT_rich Low_complexity Low_complexity 1 60 0 2 1459 459 0 0 0 chrX 114661291 114661342 -51988954 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1459 232 232 82 21 chrX 114662246 114662343 -51987953 + L1MA6 LINE L1 4984 5086 -1057 2 1459 819 325 48 19 chrX 114662657 114662964 -51987332 - ORR1D2 LTR MaLR 0 370 66 2 1459 6307 87 3 97 chrX 114662965 114663515 -51986781 - L1_Mm LINE L1 -1494 4389 3869 2 1459 3825 59 0 18 chrX 114663515 114664029 -51986267 - L1Md_F2 LINE L1 0 6582 6078 2 1459 6307 87 3 97 chrX 114664029 114664566 -51985730 - L1_Mm LINE L1 -2015 3868 3404 2 1459 6901 50 2 5 chrX 114664566 114665442 -51984854 + L1Md_F2 LINE L1 5709 6582 0 2 1459 369 263 49 29 chrX 114665695 114665797 -51984499 - MIR3 SINE MIR -1 207 104 2 1459 514 261 17 0 chrX 114666091 114666206 -51984090 - ORR1D2 LTR MaLR -253 117 1 2 1459 357 281 31 0 chrX 114666250 114666378 -51983918 + L1MA6 LINE L1 5573 5704 -596 2 1459 446 255 116 52 chrX 114666522 114666866 -51983430 + L1MA6 LINE L1 5932 6297 -3 2 1459 22 0 0 0 chrX 114667074 114667096 -51983200 + AT_rich Low_complexity Low_complexity 1 22 0 2 1459 367 0 56 19 chrX 114667179 114667233 -51983063 + (GAAAA)n Simple_repeat Simple_repeat 2 57 0 2 1459 1251 249 45 16 chrX 114667604 114667918 -51982378 - ORR1C2 LTR MaLR 0 384 62 2 1459 3294 88 11 0 chrX 114667918 114668092 -51982204 - L1_Mus1 LINE L1 -522 6045 5869 2 1459 3643 42 2 7 chrX 114668092 114668546 -51981750 - L1Md_F2 LINE L1 0 6582 6131 2 1459 6369 108 6 0 chrX 114668546 114669480 -51980816 - L1_Mus1 LINE L1 -699 5868 4928 2 1459 2232 96 69 0 chrX 114669480 114669812 -51980484 + L1_Mus1 LINE L1 6213 6567 0 2 1459 186 43 0 0 chrX 114669815 114669838 -51980458 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 1459 281 219 0 15 chrX 114669840 114669905 -51980391 - ORR1C2 LTR MaLR -312 72 9 2 1459 25 90 0 0 chrX 114669905 114669972 -51980324 + AT_rich Low_complexity Low_complexity 1 67 0 2 1459 534 122 84 0 chrX 114669977 114670084 -51980212 - L1_Mus3 LINE L1 -7 6631 6516 2 1459 2287 178 21 19 chrX 114670118 114670541 -51979755 - Lx3B LINE L1 -24 6949 6526 2 1459 414 0 0 0 chrX 114670894 114670940 -51979356 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1459 424 355 0 0 chrX 114671036 114671143 -51979153 + RSINE1 SINE B4 28 134 -31 2 1459 251 200 20 0 chrX 114671165 114671215 -51979081 + (CAGA)n Simple_repeat Simple_repeat 4 54 0 2 1459 631 304 94 5 chrX 114672021 114672213 -51978083 - B3 SINE B2 -2 214 6 2 1459 240 86 0 0 chrX 114673205 114673240 -51977056 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1459 740 301 72 0 chrX 114673509 114673702 -51976594 - B3 SINE B2 -4 212 6 2 1459 532 310 95 46 chrX 114674083 114674448 -51975848 - MTD LTR MaLR -5 414 5 2 1459 467 379 6 24 chrX 114674801 114674966 -51975330 + RSINE1 SINE B4 4 165 0 2 1459 1314 77 0 6 chrX 114675224 114675406 -51974890 + L1_Mus1 LINE L1 6386 6566 -1 2 1459 451 186 15 15 chrX 114675876 114676007 -51974289 + (TATG)n Simple_repeat Simple_repeat 4 134 0 2 1459 7239 78 3 9 chrX 114676154 114677134 -51973162 - L1Md_F2 LINE L1 0 6582 5609 2 1459 1782 219 26 61 chrX 114677455 114677966 -51972330 + RLTR26 LTR ERVK 10 543 -99 2 1459 640 221 26 39 chrX 114677948 114678103 -51972193 + RLTR26 LTR ERVK 490 642 0 2 1459 923 286 116 0 chrX 114678131 114678442 -51971854 + Lx8 LINE L1 6178 6524 -949 2 1459 416 296 167 26 chrX 114678673 114678829 -51971467 + B3 SINE B2 39 216 0 2 1459 365 374 25 50 chrX 114678984 114679184 -51971112 + B3A SINE B2 4 198 0 2 1459 7581 154 32 10 chrX 114679399 114680707 -51969589 + Lx2 LINE L1 5660 6996 -1 2 1459 471 18 0 0 chrX 114680824 114680880 -51969416 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 1459 744 266 5 77 chrX 114681346 114681377 -51968919 + B3 SINE B2 9 30 -186 2 1459 2441 166 70 33 chrX 114681377 114681889 -51968407 + RMER16 LTR ERVK 3 533 0 2 1459 744 266 5 77 chrX 114681889 114682077 -51968219 + B3 SINE B2 31 212 -4 2 1459 32 75 0 0 chrX 114682204 114682271 -51968025 + AT_rich Low_complexity Low_complexity 1 67 0 2 1459 1373 159 44 55 chrX 114682356 114682628 -51967668 + Lx3C LINE L1 6707 6975 -1 2 1459 30 0 0 0 chrX 114682628 114682658 -51967638 + AT_rich Low_complexity Low_complexity 1 30 0 2 1459 9208 58 3 1 chrX 114683198 114685068 -51965228 - L1Md_F2 LINE L1 0 6582 4712 2 1459 21 0 0 0 chrX 114685341 114685362 -51964934 + AT_rich Low_complexity Low_complexity 1 21 0 2 1459 23 0 0 0 chrX 114685401 114685424 -51964872 + AT_rich Low_complexity Low_complexity 1 23 0 2 1459 318 180 0 0 chrX 114685461 114685522 -51964774 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1459 38 93 0 0 chrX 114685905 114686013 -51964283 + AT_rich Low_complexity Low_complexity 1 108 0 2 1459 213 235 0 0 chrX 114686353 114686404 -51963892 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 1459 399 41 0 0 chrX 114686655 114686704 -51963592 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1460 9132 135 2 8 chrX 114688082 114690223 -51960073 + L1_Mus3 LINE L1 4391 6518 -120 2 1460 279 0 0 0 chrX 114690841 114690872 -51959424 + (TATAA)n Simple_repeat Simple_repeat 2 32 0 2 1460 340 294 39 11 chrX 114691249 114691431 -51958865 - L1MB7 LINE L1 -223 5961 5775 2 1460 363 191 59 0 chrX 114691757 114691825 -51958471 + RMER17B LTR ERVK 1 72 -886 2 1460 520 54 0 13 chrX 114691825 114691900 -51958396 + L1_Mus2 LINE L1 6492 6565 -1 2 1460 4327 190 24 15 chrX 114691977 114692838 -51957458 + RMER17B LTR ERVK 65 933 -25 2 1460 375 310 58 6 chrX 114692866 114693022 -51957274 - L1M3e LINE L1 -539 6733 6570 2 1460 222 37 0 0 chrX 114693022 114693049 -51957247 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2 1460 344 348 166 8 chrX 114693268 114693532 -51956764 - MTE2b LTR MaLR -3 376 71 2 1460 352 302 21 10 chrX 114693550 114693647 -51956649 - MTE2b LTR MaLR -281 98 1 2 1460 276 294 42 0 chrX 114693649 114693768 -51956528 - L1M3e LINE L1 -826 6425 6302 2 1460 22 35 0 0 chrX 114693924 114693953 -51956343 + AT_rich Low_complexity Low_complexity 1 29 0 2 1460 582 301 24 78 chrX 114693978 114693994 -51956302 - B3 SINE B2 -13 203 188 2 1460 279 0 0 0 chrX 114693994 114694025 -51956271 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1460 940 103 17 11 chrX 114694025 114694200 -51956096 + (TA)n Simple_repeat Simple_repeat 1 177 0 2 1460 582 301 24 78 chrX 114694200 114694304 -51955992 - B3 SINE B2 -29 187 93 2 1460 1977 195 46 88 chrX 114694304 114694827 -51955469 - RLTR16 LTR ERVK -4 501 1 2 1460 582 301 24 78 chrX 114694827 114694909 -51955387 - B3 SINE B2 -124 92 11 2 1460 782 301 104 28 chrX 114694915 114695558 -51954738 - L1M3e LINE L1 -1257 5843 5152 2 1460 314 369 69 12 chrX 114695620 114695793 -51954503 - RMER30 DNA MER1_type -1 201 19 2 1460 367 289 103 30 chrX 114695996 114696199 -51954097 + Charlie12 DNA MER1_type 624 841 -2032 2 1460 241 356 28 39 chrX 114696536 114696717 -51953579 - MTE-int LTR MaLR -1400 180 2 2 1460 674 333 40 0 chrX 114696716 114696917 -51953379 - B3 SINE B2 0 216 8 2 1460 228 200 51 39 chrX 114697268 114697346 -51952950 - L1M3e LINE L1 -4997 2033 1955 2 1460 7085 34 0 4 chrX 114697922 114698747 -51951549 - RLTR13B2 LTR ERVK 0 822 1 2 1460 30 69 0 0 chrX 114699581 114699639 -51950657 + AT_rich Low_complexity Low_complexity 1 58 0 2 1460 384 355 121 15 chrX 114699651 114699983 -51950313 - L1M4 LINE L1 -1195 4951 4585 2 1460 597 269 31 0 chrX 114700101 114700231 -51950065 + B1_Mur4 SINE Alu 11 144 -6 2 1460 201 209 0 0 chrX 114700231 114700298 -51949998 + GA-rich Low_complexity Low_complexity 1 67 0 2 1460 412 315 118 36 chrX 114700299 114700579 -51949717 - L1M4 LINE L1 -1698 4448 4146 2 1460 1952 284 88 19 chrX 114701120 114701433 -51948863 - Lx6 LINE L1 -14 7446 7111 2 1460 876 46 0 0 chrX 114701433 114701542 -51948754 + (TA)n Simple_repeat Simple_repeat 2 110 0 2 1460 1952 284 88 19 chrX 114701542 114701850 -51948446 - Lx6 LINE L1 -350 7110 6782 2 1460 2389 184 58 21 chrX 114701846 114702427 -51947869 - L1_Mur3 LINE L1 -996 4884 4282 2 1460 34784 57 4 4 chrX 114702423 114703936 -51946360 - L1Md_F2 LINE L1 0 6582 5074 3 1460 2455 107 102 47 chrX 114703936 114704386 -51945910 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1460 34784 77 10 2 chrX 114704386 114708902 -51941394 - L1Md_F2 LINE L1 -810 5073 561 3 1460 2777 218 86 21 chrX 114708912 114709706 -51940590 - L1_Mur3 LINE L1 -2180 3700 2856 2 1460 5106 149 20 12 chrX 114709720 114710584 -51939712 - Lx2 LINE L1 -2 6995 6125 3 1460 382 250 0 0 chrX 114710634 114710718 -51939578 + B3A SINE B2 49 132 -66 3 1460 1236 263 79 13 chrX 114710760 114711226 -51939070 - L1_Rod LINE L1 -3411 2436 1940 3 1460 1631 201 55 21 chrX 114711391 114711772 -51938524 - ORR1B1 LTR MaLR 0 394 1 3 1460 2183 191 56 40 chrX 114711772 114712377 -51937919 - ORR1B1-int LTR MaLR 0 1792 1001 3 1460 3048 183 86 6 chrX 114713045 114713733 -51936563 - ORR1B1-int LTR MaLR -503 1460 718 3 1460 1116 220 64 64 chrX 114713693 114713975 -51936321 - MT2B LTR ERVL -315 286 5 3 1460 3489 220 17 47 chrX 114713767 114714591 -51935705 - ORR1B1-int LTR MaLR -1164 799 1 3 1460 1504 183 89 83 chrX 114714593 114714980 -51935316 - ORR1B1 LTR MaLR -2 419 3 3 1460 198 71 0 0 chrX 114715008 114715036 -51935260 + (TTG)n Simple_repeat Simple_repeat 2 29 0 3 1460 968 106 0 7 chrX 114715051 114715193 -51935103 - B1_Mus2 SINE Alu -1 146 6 3 1460 8292 39 2 1 chrX 114715720 114716771 -51933525 - L1Md_F3 LINE L1 -3 6581 5528 3 1460 2930 50 8 0 chrX 114716768 114717131 -51933165 + L1Md_F3 LINE L1 5175 5540 -343 3 1460 452 358 44 62 chrX 114717984 114718258 -51932038 + B4A SINE B4 2 270 -22 3 1460 516 16 0 0 chrX 114718287 114718348 -51931948 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 1460 21 0 0 0 chrX 114719765 114719786 -51930510 + AT_rich Low_complexity Low_complexity 1 21 0 3 1460 180 0 0 0 chrX 114720107 114720127 -51930169 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1460 4359 234 37 14 chrX 114720228 114721178 -51929118 + Lx5 LINE L1 6079 7050 0 3 1460 248 351 0 0 chrX 114721441 114721498 -51928798 + RSINE1 SINE B4 92 148 -17 3 1460 1689 232 68 3 chrX 114721634 114721989 -51928307 + ORR1C2 LTR MaLR 1 378 -6 3 1460 472 200 28 74 chrX 114721997 114722105 -51928191 + ORR1C2-int LTR MaLR 2 104 -1405 3 1460 1162 152 122 22 chrX 114722115 114722385 -51927911 - BGLII_B LTR ERVK -144 297 1 3 1460 4571 173 9 7 chrX 114722386 114723481 -51926815 - Lx2 LINE L1 -598 6399 5303 3 1460 786 289 82 97 chrX 114723502 114723882 -51926414 + ORR1C2 LTR MaLR 1 374 0 3 1460 1535 74 42 0 chrX 114724252 114724309 -51925987 - L1_Mus4 LINE L1 -713 5923 5867 3 1460 564 15 0 0 chrX 114724309 114724374 -51925922 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 1460 1535 74 42 0 chrX 114724374 114724532 -51925764 - L1_Mus4 LINE L1 -770 5866 5700 3 1460 3740 171 146 0 chrX 114724538 114725346 -51924950 + L1_Mur2 LINE L1 4251 5176 -701 3 1460 324 219 12 0 chrX 114725347 114725429 -51924867 + L1_Mm LINE L1 5259 5341 -542 3 1460 725 322 107 21 chrX 114725440 114725776 -51924520 + ORR1D2 LTR MaLR 6 370 0 3 1460 453 269 149 63 chrX 114726404 114726833 -51923463 - Lx7 LINE L1 0 7696 7231 3 1460 995 219 51 4 chrX 114726847 114727104 -51923192 - RMER17C LTR ERVK -8 402 134 3 1460 616 201 109 49 chrX 114727133 114727316 -51922980 - RMER17C-int LTR ERVK -1560 1678 1485 3 1460 228 182 0 0 chrX 114727803 114727847 -51922449 + GA-rich Low_complexity Low_complexity 2 45 0 3 1460 254 108 0 0 chrX 114727918 114727955 -51922341 - RMER17C-int LTR ERVK -2642 596 560 3 1460 909 198 158 47 chrX 114728021 114728346 -51921950 - RMER17C-int LTR ERVK -2877 361 1 3 1460 1521 183 145 8 chrX 114728352 114728594 -51921702 - RMER17C LTR ERVK -3 407 140 3 1460 903 45 0 0 chrX 114728594 114728706 -51921590 + (GAA)n Simple_repeat Simple_repeat 3 114 0 3 1460 1521 183 145 8 chrX 114728706 114728821 -51921475 - RMER17C LTR ERVK -271 139 1 3 1460 1428 228 46 0 chrX 114728827 114729134 -51921162 - Lx7 LINE L1 -500 7196 6876 3 1460 2129 340 99 49 chrX 114729134 114730291 -51920005 - MTE-int LTR MaLR -30 1550 336 3 1460 1355 286 46 41 chrX 114730729 114731166 -51919130 - Lx6 LINE L1 -26 7434 6996 3 1460 32 0 0 0 chrX 114731214 114731246 -51919050 + AT_rich Low_complexity Low_complexity 1 32 0 3 1460 28 0 0 0 chrX 114731349 114731377 -51918919 + AT_rich Low_complexity Low_complexity 1 28 0 3 1460 23 33 0 0 chrX 114731420 114731450 -51918846 + AT_rich Low_complexity Low_complexity 1 30 0 3 1460 3345 52 29 31 chrX 114731707 114732183 -51918113 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1460 1099 264 49 46 chrX 114732218 114732587 -51917709 - ORR1D2 LTR MaLR 0 370 1 3 1460 417 289 10 0 chrX 114732587 114732691 -51917605 - ORR1D2-int LTR MaLR 0 1370 1266 3 1460 2154 268 125 50 chrX 114732691 114733406 -51916890 - ORR1D2-int LTR MaLR -482 888 111 3 1460 3330 99 13 63 chrX 114733406 114733945 -51916351 + RLTR1B LTR ERV1 1 512 0 3 1460 2154 268 125 50 chrX 114733945 114734053 -51916243 - ORR1D2-int LTR MaLR -1260 110 3 3 1460 775 265 50 61 chrX 114734086 114734347 -51915949 - ORR1D2 LTR MaLR -126 258 1 3 1460 951 306 20 78 chrX 114734347 114734698 -51915598 - ORR1D2 LTR MaLR -40 330 1 3 1460 713 253 76 27 chrX 114735207 114735430 -51914866 + LTRIS4 LTR ERV1 274 507 0 3 1460 702 375 90 43 chrX 114736573 114737041 -51913255 - MLT-int LTR MaLR -166 1569 1080 3 1460 380 378 63 37 chrX 114737373 114737942 -51912354 - MLT-int LTR MaLR -1027 708 125 3 1460 309 280 0 5 chrX 114738237 114738330 -51911966 - RLTR22_Mur LTR ERVK -73 1775 1648 3 1460 301 214 0 28 chrX 114738319 114738391 -51911905 - RLTR22_Mur LTR ERVK -1778 70 1 3 1460 491 407 42 24 chrX 114738460 114738792 -51911504 - MLT2B3 LTR ERVL -140 414 77 3 1460 185 94 31 0 chrX 114739141 114739173 -51911123 + (TTTTG)n Simple_repeat Simple_repeat 1 33 0 3 1460 1553 212 3 3 chrX 114739173 114739500 -51910796 - Lx LINE L1 -8 6646 6320 3 1460 426 20 0 0 chrX 114739522 114739573 -51910723 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1460 14039 189 104 41 chrX 114739573 114742871 -51907425 - Lx LINE L1 -644 6010 2372 3 1460 443 256 23 75 chrX 114742871 114743044 -51907252 + RNLTR23 LTR ERVK 479 642 0 3 1460 14039 189 104 41 chrX 114743044 114744869 -51905427 - Lx LINE L1 -644 2371 356 3 1460 384 254 31 102 chrX 114745421 114745543 -51904753 + ORR1C2 LTR MaLR 2 114 -260 3 1460 1483 276 14 25 chrX 114745543 114745988 -51904308 + RLTR22_Mur LTR ERVK 1 440 -1408 3 1460 1774 246 72 35 chrX 114745996 114746481 -51903815 - RMER19C LTR ERVK 0 611 109 3 1460 1141 240 19 55 chrX 114746539 114746905 -51903391 + RLTR22_Mur LTR ERVK 454 806 -1042 3 1460 543 307 97 42 chrX 114747012 114747250 -51903046 + RMER12 LTR ERVK 994 1244 -78 3 1460 781 256 165 0 chrX 114747314 114747544 -51902752 + ORR1C2 LTR MaLR 117 384 0 3 1460 22 0 0 0 chrX 114747567 114747589 -51902707 + AT_rich Low_complexity Low_complexity 1 22 0 3 1460 189 107 0 0 chrX 114747718 114747746 -51902550 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 3 1460 242 286 103 6 chrX 114748145 114748310 -51901986 + L1MCa LINE L1 1142 1322 -5186 3 1460 3875 166 29 4 chrX 114748439 114749171 -51901125 + L1Md_A LINE L1 441 1190 -5534 3 1460 32622 76 7 0 chrX 114749191 114754408 -51895888 + L1Md_F2 LINE L1 334 5585 -298 3 1460 7762 58 2 9 chrX 114754409 114755410 -51894886 + L1Md_F2 LINE L1 5587 6580 -2 3 1460 237 69 16 79 chrX 114756154 114756217 -51894079 + (TTTG)n Simple_repeat Simple_repeat 1 59 0 3 1460 1526 228 72 70 chrX 114756219 114756663 -51893633 - Lx6 LINE L1 -11 7449 7005 3 1460 3543 133 0 6 chrX 114756693 114757236 -51893060 + Lx LINE L1 6109 6648 -6 3 1460 249 33 0 0 chrX 114757238 114757268 -51893028 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 3 1460 245 118 20 0 chrX 114757638 114757689 -51892607 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1460 6075 221 47 6 chrX 114757786 114759567 -51890729 - Lx5 LINE L1 0 7050 5197 3 1460 2919 192 95 41 chrX 114759567 114760401 -51889895 + RLTR13C1 LTR ERVK 1 983 0 3 1460 13159 204 26 12 chrX 114760401 114761726 -51888570 - Lx5 LINE L1 -675 5202 3851 3 1460 209 33 33 0 chrX 114761726 114761756 -51888540 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1460 13159 204 26 12 chrX 114761756 114762123 -51888173 - Lx5 LINE L1 -2027 3850 3482 3 1460 1248 91 0 0 chrX 114762123 114762299 -51887997 + (TTCC)n Simple_repeat Simple_repeat 3 178 0 3 1460 13159 204 26 12 chrX 114762299 114763596 -51886700 - Lx5 LINE L1 -2396 3481 2170 3 1460 567 105 0 10 chrX 114763619 114763715 -51886581 - L1_Mus1 LINE L1 -3 6564 6470 3 1460 4085 70 0 0 chrX 114763715 114764232 -51886064 + L1_Mus1 LINE L1 5940 6456 -111 3 1460 1646 265 62 16 chrX 114764229 114764369 -51885927 - Lx5 LINE L1 -3694 2183 2053 3 1460 258 81 0 0 chrX 114764369 114764406 -51885890 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1460 1646 265 62 16 chrX 114764406 114764809 -51885487 - Lx5 LINE L1 -3825 2052 1616 3 1460 545 52 13 0 chrX 114764825 114764902 -51885394 + (TTTC)n Simple_repeat Simple_repeat 3 80 0 3 1460 2971 191 50 13 chrX 114764902 114765406 -51884890 - Lx4A LINE L1 -11 7047 6523 3 1460 2499 92 40 54 chrX 114765406 114765833 -51884463 - BGLII LTR ERVK 0 421 1 3 1460 2971 191 50 13 chrX 114765833 114765932 -51884364 - Lx4A LINE L1 -536 6522 6422 3 1460 4320 168 22 6 chrX 114765932 114766737 -51883559 + L1_Mur2 LINE L1 4401 5218 -659 3 1460 326 241 0 0 chrX 114767097 114767176 -51883120 + Lx7 LINE L1 7612 7690 -6 3 1460 755 268 30 15 chrX 114767339 114767540 -51882756 - B3 SINE B2 -9 207 4 3 1460 469 346 30 74 chrX 114767590 114767793 -51882503 - B3A SINE B2 -4 194 1 3 1460 997 313 73 20 chrX 114767934 114768332 -51881964 + MTD LTR MaLR 1 419 0 3 1460 1395 273 37 17 chrX 114768491 114768897 -51881399 - ORR1D2-int LTR MaLR 0 1370 957 3 1460 3620 123 36 17 chrX 114768991 114769579 -51880717 - L1_Mus4 LINE L1 0 6636 6038 3 1460 1238 113 0 0 chrX 114769579 114769765 -51880531 + L1_Mus4 LINE L1 5852 6037 -599 3 1460 1759 286 50 55 chrX 114769829 114770463 -51879833 - ORR1D2-int LTR MaLR -627 631 1 3 1460 872 298 121 15 chrX 114770467 114770798 -51879498 - ORR1D2 LTR MaLR -4 366 1 3 1460 373 248 115 35 chrX 114771409 114771522 -51878774 + RSINE1 SINE B4 32 153 -12 3 1460 303 28 0 0 chrX 114771727 114771763 -51878533 + (CAAAA)n Simple_repeat Simple_repeat 4 39 0 3 1460 189 0 0 0 chrX 114771763 114771783 -51878513 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1460 6193 48 2 9 chrX 114771994 114772801 -51877495 - L1Md_F2 LINE L1 0 6582 5803 3 1460 1236 365 32 20 chrX 114772877 114773537 -51876759 - Lx8 LINE L1 -289 7184 6517 3 1460 228 222 15 31 chrX 114773626 114773691 -51876605 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 3 1460 225 178 0 0 chrX 114774548 114774593 -51875703 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1460 593 300 174 68 chrX 114774623 114775238 -51875058 - L1M4 LINE L1 -1661 4485 3806 3 1460 246 320 0 39 chrX 114775411 114775489 -51874807 + ID SINE ID 8 82 -142 3 1460 529 189 108 16 chrX 114778587 114778716 -51871580 - Lx5 LINE L1 -1038 6012 5872 3 1460 2257 204 63 100 chrX 114778741 114779500 -51870796 + L1VL4 LINE L1 255 985 -5317 3 1460 270 130 18 53 chrX 114779486 114779543 -51870753 + MusHAL1 LINE L1 1809 1863 -849 3 1460 7203 183 28 11 chrX 114779536 114781157 -51869139 + Lx2B LINE L1 5349 6983 -17 3 1460 594 0 0 0 chrX 114781157 114781223 -51869073 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 3 1460 7962 191 35 16 chrX 114781231 114782987 -51867309 - Lx5 LINE L1 0 5877 4089 3 1460 1142 303 53 15 chrX 114783112 114783507 -51866789 + MTD LTR MaLR 10 419 0 3 1460 1958 310 82 102 chrX 114783507 114784584 -51865712 + MTD-int LTR MaLR 2 1021 -237 3 1460 483 18 0 0 chrX 114784584 114784640 -51865656 + (TTTA)n Simple_repeat Simple_repeat 3 58 0 3 1460 1958 310 82 102 chrX 114784640 114784842 -51865454 + MTD-int LTR MaLR 1022 1256 -2 3 1460 1092 260 104 3 chrX 114784846 114785143 -51865153 + MTD LTR MaLR 3 329 -90 3 1460 581 325 50 36 chrX 114786400 114786667 -51863629 + MTEb LTR MaLR 117 379 0 3 1460 1576 178 68 28 chrX 114786863 114787186 -51863110 + Lx2B LINE L1 6664 6999 -1 3 1460 228 220 0 0 chrX 114787523 114787573 -51862723 + (CAGA)n Simple_repeat Simple_repeat 4 53 0 3 1460 22 88 0 0 chrX 114787602 114787659 -51862637 + AT_rich Low_complexity Low_complexity 1 57 0 3 1460 238 288 17 17 chrX 114788547 114788607 -51861689 + tRNA-Ala-GCY_ tRNA tRNA 1 60 -15 3 1460 573 15 0 0 chrX 114788722 114788788 -51861508 + (GA)n Simple_repeat Simple_repeat 1 66 0 3 1460 975 160 0 0 chrX 114788784 114788959 -51861337 + GA-rich Low_complexity Low_complexity 2 176 0 3 1460 22 56 0 0 chrX 114789211 114789247 -51861049 + AT_rich Low_complexity Low_complexity 1 36 0 3 1460 273 200 0 0 chrX 114789399 114789454 -51860842 - L1M2 LINE L1 -579 5721 5667 4 1460 32 26 0 0 chrX 114789870 114789909 -51860387 + AT_rich Low_complexity Low_complexity 1 39 0 4 1460 330 363 26 29 chrX 114789927 114790011 -51860285 + L1MA6 LINE L1 5847 5928 -372 4 1460 2711 34 22 0 chrX 114790011 114790331 -51859965 + IAPLTR2b LTR ERVK 1 327 0 4 1460 330 363 26 29 chrX 114790331 114790343 -51859953 + L1MA6 LINE L1 5929 5934 -366 4 1460 1890 72 0 8 chrX 114790343 114790596 -51859700 + L1_Mus2 LINE L1 6316 6566 0 4 1460 330 363 26 29 chrX 114790596 114790915 -51859381 + L1MA6 LINE L1 5935 6261 -39 4 1460 1888 73 8 0 chrX 114791916 114792164 -51858132 + L1_Mus1 LINE L1 6318 6567 0 4 1460 352 256 58 0 chrX 114792284 114792370 -51857926 + MTE2a LTR MaLR 276 366 -13 4 1460 516 32 0 0 chrX 114792431 114792493 -51857803 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 1460 7016 164 17 71 chrX 114792587 114794062 -51856234 - L1_Mur2 LINE L1 -1015 4862 3472 4 1460 222 37 0 0 chrX 114794062 114794089 -51856207 + (TTG)n Simple_repeat Simple_repeat 1 27 0 4 1460 7016 164 17 71 chrX 114794089 114794171 -51856125 - L1_Mur2 LINE L1 -2406 3471 3389 4 1460 7736 182 17 3 chrX 114794174 114795887 -51854409 + Lx2 LINE L1 5262 6997 0 4 1460 6659 164 30 30 chrX 114796317 114798012 -51852284 + L1VL4 LINE L1 573 2254 -1305 4 1460 6753 84 2 3 chrX 114798010 114798927 -51851369 - L1Md_F2 LINE L1 -10 6572 5657 4 1460 12934 156 28 9 chrX 114798934 114802373 -51847923 + L1Md_F LINE L1 31 3531 -2352 4 1460 407 68 17 0 chrX 114802389 114802448 -51847848 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1460 450 0 0 0 chrX 114802448 114802497 -51847799 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 1460 280 323 75 0 chrX 114802506 114802599 -51847697 - RSINE1 SINE B4 -22 143 44 4 1460 3928 283 75 37 chrX 114802791 114804025 -51846271 + Lx7 LINE L1 5984 7247 -449 4 1460 270 55 17 68 chrX 114804025 114804084 -51846212 + (CAA)n Simple_repeat Simple_repeat 2 57 0 4 1460 3928 283 75 37 chrX 114804084 114804499 -51845797 + Lx7 LINE L1 7248 7696 0 4 1460 31315 81 1 6 chrX 114804558 114809798 -51840498 + L1Md_F2 LINE L1 373 5585 -298 4 1460 7697 56 2 9 chrX 114809799 114810800 -51839496 + L1Md_F2 LINE L1 5587 6580 -2 4 1460 8513 82 3 0 chrX 114810800 114811951 -51838345 + L1Md_F2 LINE L1 4433 5586 -297 4 1460 7727 56 10 4 chrX 114811951 114812941 -51837355 + L1Md_F2 LINE L1 5587 6582 0 4 1460 305 291 84 50 chrX 114813187 114813368 -51836928 + MIRb SINE MIR 53 248 -20 4 1460 22 88 0 0 chrX 114813514 114813571 -51836725 + AT_rich Low_complexity Low_complexity 1 57 0 4 1460 1796 147 31 15 chrX 114814838 114815162 -51835134 - ORR1A4 LTR MaLR 0 329 1 4 1460 306 369 107 62 chrX 114815574 114815846 -51834450 + B4A SINE B4 6 289 -3 4 1460 21 36 0 0 chrX 114816291 114816319 -51833977 + AT_rich Low_complexity Low_complexity 1 28 0 4 1460 25 0 0 0 chrX 114816383 114816408 -51833888 + AT_rich Low_complexity Low_complexity 1 25 0 4 1460 822 86 0 0 chrX 114816914 114817030 -51833266 + (TA)n Simple_repeat Simple_repeat 2 117 0 4 1460 291 116 0 0 chrX 114817082 114817125 -51833171 + Lx LINE L1 6361 6403 -251 4 1460 1027 288 30 34 chrX 114817124 114817480 -51832816 - RMER1A Other Other -522 544 267 4 1460 2065 148 42 0 chrX 114817897 114818256 -51832040 - RMER6D LTR ERVK -343 377 4 4 1461 547 200 9 0 chrX 114819185 114819300 -51830996 + ORR1A4 LTR MaLR 206 321 -8 4 1461 796 208 137 0 chrX 114819304 114819487 -51830809 + ORR1A4-int LTR MaLR 1 208 -1755 4 1461 586 216 23 31 chrX 114819482 114819611 -51830685 - ORR1A4 LTR MaLR -201 128 1 4 1461 397 327 27 50 chrX 114819750 114819951 -51830345 - B3A SINE B2 0 216 20 4 1461 965 122 6 0 chrX 114820799 114820955 -51829341 + (GAAA)n Simple_repeat Simple_repeat 3 159 0 4 1461 21 57 0 0 chrX 114821400 114821435 -51828861 + AT_rich Low_complexity Low_complexity 1 35 0 4 1461 671 368 22 19 chrX 114824278 114824549 -51825747 - B4A SINE B4 -19 273 2 4 1461 268 380 16 0 chrX 114825892 114826021 -51824275 + Lx8 LINE L1 7170 7300 -173 4 1461 22 0 0 0 chrX 114826424 114826446 -51823850 + AT_rich Low_complexity Low_complexity 1 22 0 4 1461 233 297 0 0 chrX 114827106 114827180 -51823116 + A-rich Low_complexity Low_complexity 1 74 0 4 1461 1029 99 0 0 chrX 114827527 114827679 -51822617 - L1_Mus1 LINE L1 0 6567 6416 4 1461 600 84 0 0 chrX 114828495 114828578 -51821718 + (GGA)n Simple_repeat Simple_repeat 3 85 0 4 1461 287 300 70 51 chrX 114829210 114829523 -51820773 + L1MA9 LINE L1 4926 5244 -899 4 1461 488 276 74 30 chrX 114829810 114830012 -51820284 + L1MA9 LINE L1 5567 5777 -523 4 1461 23 54 0 0 chrX 114830131 114830168 -51820128 + AT_rich Low_complexity Low_complexity 1 37 0 4 1461 222 195 0 0 chrX 114830171 114830212 -51820084 + GA-rich Low_complexity Low_complexity 3 43 0 4 1461 1300 82 27 6 chrX 114830433 114830616 -51819680 - B2_Mm2 SINE B2 -8 187 1 4 1461 536 273 153 43 chrX 114830631 114831114 -51819182 + L1MA9 LINE L1 5768 6303 -9 4 1461 27 0 0 0 chrX 114831722 114831749 -51818547 + AT_rich Low_complexity Low_complexity 1 27 0 4 1461 192 284 97 61 chrX 114831805 114831970 -51818326 + L2 LINE L2 683 853 -2566 4 1461 2749 90 50 0 chrX 114832092 114832469 -51817827 + MTA_Mm LTR MaLR 1 396 0 4 1461 22 0 0 0 chrX 114832557 114832579 -51817717 + AT_rich Low_complexity Low_complexity 1 22 0 4 1461 1577 244 37 6 chrX 114833034 114833716 -51816580 + L1_Mur1 LINE L1 831 1541 -2371 4 1461 2158 197 43 0 chrX 114833716 114834138 -51816158 - Lx2 LINE L1 0 6997 6558 4 1461 5934 100 44 120 chrX 114834138 114834403 -51815893 - RLTR13D4 LTR ERVK -2 1031 883 4 1461 1939 52 8 4 chrX 114834403 114834654 -51815642 - L1_Mus1 LINE L1 0 6567 6316 4 1461 5934 100 44 120 chrX 114834654 114835504 -51814792 - RLTR13D4 LTR ERVK -151 882 1 4 1461 883 153 13 0 chrX 114835522 114835679 -51814617 - L1_Mur2 LINE L1 -515 5362 5204 4 1461 382 169 12 0 chrX 114835684 114835767 -51814529 + L1_Mur1 LINE L1 1534 1617 -2295 4 1461 610 170 0 0 chrX 114835767 114835873 -51814423 + L1_Mur1 LINE L1 3005 3110 -802 4 1461 7411 89 1 6 chrX 114835875 114837227 -51813069 + L1_Mus1 LINE L1 5222 6567 0 4 1461 9698 171 22 82 chrX 114837236 114837590 -51812706 + L1_Mur2 LINE L1 3124 3476 -2401 4 1461 186 43 0 0 chrX 114837590 114837613 -51812683 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 1461 9698 171 22 82 chrX 114837613 114837866 -51812430 + L1_Mur2 LINE L1 3477 3753 -2124 4 1461 2283 69 122 11 chrX 114837866 114838217 -51812079 - RLTR10 LTR ERVK 0 390 1 4 1461 9698 171 22 82 chrX 114838217 114839990 -51810306 + L1_Mur2 LINE L1 3754 5361 -516 4 1461 1486 232 115 46 chrX 114839993 114840539 -51809757 - RLTR31A_Mm LTR ERVK 0 584 1 4 1461 207 0 0 0 chrX 114840554 114840577 -51809719 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 4 1461 1152 184 13 35 chrX 114840592 114840823 -51809473 + ORR1B2 LTR MaLR 91 316 -51 4 1461 779 175 0 7 chrX 114840824 114840979 -51809317 + GA-rich Low_complexity Low_complexity 3 156 0 4 1461 2102 215 21 5 chrX 114840981 114841415 -51808881 + L1_Mur2 LINE L1 5351 5791 -86 4 1461 1653 107 4 12 chrX 114841413 114841659 -51808637 - Lx LINE L1 -337 6317 6074 4 1461 1827 70 4 4 chrX 114841668 114841911 -51808385 - L1_Mus1 LINE L1 0 6567 6325 4 1461 2279 256 98 11 chrX 114841911 114842668 -51807628 + Lx4B LINE L1 6186 6997 -3 4 1461 1613 107 0 0 chrX 114844252 114844476 -51805820 - L1_Mus1 LINE L1 -1 6566 6343 4 1461 2483 62 3 3 chrX 114844476 114844802 -51805494 - IAPEY2_LTR LTR ERVK 0 357 32 4 1461 3942 78 11 2 chrX 114844812 114845335 -51804961 - L1_Mus1 LINE L1 -219 6348 5821 4 1461 2370 92 25 0 chrX 114845328 114845654 -51804642 + L1_Mus1 LINE L1 5464 5797 -86 4 1461 22 0 0 0 chrX 114846178 114846200 -51804096 + AT_rich Low_complexity Low_complexity 1 22 0 4 1461 604 328 87 15 chrX 114846772 114847184 -51803112 - L1MC3 LINE L1 -79 7706 7265 4 1461 323 323 92 45 chrX 114847477 114848150 -51802146 - L1MC3 LINE L1 -1280 6505 5784 4 1461 232 331 100 10 chrX 114848256 114848567 -51801729 - L1MD LINE L1 -2327 5668 5330 4 1461 23 0 0 0 chrX 114848601 114848624 -51801672 + AT_rich Low_complexity Low_complexity 1 23 0 4 1461 265 239 91 66 chrX 114848701 114848898 -51801398 - L1MC3 LINE L1 -891 5255 5054 4 1461 252 268 18 0 chrX 114849049 114849105 -51801191 + Lx8 LINE L1 7174 7230 -243 4 1461 5465 175 36 6 chrX 114849110 114850450 -51799846 - Lx LINE L1 -13 6641 5260 4 1461 3177 176 0 9 chrX 114850445 114851022 -51799274 + L1_Mur2 LINE L1 4687 5258 -619 4 1461 247 211 0 40 chrX 114851120 114851194 -51799102 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 4 1461 233 139 194 65 chrX 114851196 114851304 -51798992 + Lx8 LINE L1 7349 7470 -3 4 1461 4270 189 60 12 chrX 114851368 114852217 -51798079 + RMER19B LTR ERVK 1 890 -12 4 1461 378 330 59 37 chrX 114852384 114852697 -51797599 - MTEa LTR MaLR -5 374 8 4 1461 5374 105 11 65 chrX 114852891 114854439 -51795857 + L1VL4 LINE L1 310 1799 -1760 4 1461 371 150 12 0 chrX 114854419 114854499 -51795797 + L1VL4 LINE L1 1681 1761 -1798 4 1461 2783 103 2 5 chrX 114854499 114854900 -51795396 + MTB LTR MaLR 1 400 0 4 1461 4741 179 63 12 chrX 114854900 114855833 -51794463 + MTB-int LTR MaLR 3 983 -275 4 1461 1446 109 24 8 chrX 114856419 114856669 -51793627 + MTB-int LTR MaLR 845 1098 0 4 1461 2700 114 8 2 chrX 114856671 114857067 -51793229 + MTB LTR MaLR 3 400 0 4 1461 10380 111 18 25 chrX 114857067 114858810 -51791486 + L1VL4 LINE L1 1757 3488 -71 4 1461 8288 43 5 1 chrX 114858806 114859895 -51790401 - L1Md_F3 LINE L1 -1 6583 5491 4 1461 324 79 95 0 chrX 114859894 114859957 -51790339 + L1VL4 LINE L1 3491 3559 0 4 1461 435 133 89 0 chrX 114859959 114860049 -51790247 - Lx5 LINE L1 -1294 5756 5659 4 1461 328 313 94 24 chrX 114860146 114860316 -51789980 - L1MB8 LINE L1 -4 6174 5993 4 1461 1140 102 12 0 chrX 114860333 114860500 -51789796 - L1_Mus2 LINE L1 -1 6565 6397 4 1461 25 0 0 0 chrX 114860737 114860762 -51789534 + AT_rich Low_complexity Low_complexity 1 25 0 4 1461 465 19 0 0 chrX 114860827 114860881 -51789415 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 4 1461 26 50 0 0 chrX 114861543 114861583 -51788713 + AT_rich Low_complexity Low_complexity 1 40 0 4 1461 326 289 110 43 chrX 114861657 114862148 -51788148 + L1M2 LINE L1 3125 3648 -2495 4 1461 1742 42 0 0 chrX 114862464 114862681 -51787615 - L1_Mm LINE L1 -2903 2980 2764 4 1461 1235 40 17 33 chrX 114862681 114862861 -51787435 + L1Md_F3 LINE L1 6408 6584 0 4 1461 29 98 0 0 chrX 114863021 114863113 -51787183 + AT_rich Low_complexity Low_complexity 1 92 0 4 1461 207 139 0 0 chrX 114863574 114863610 -51786686 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1461 3271 146 56 0 chrX 114863769 114864360 -51785936 + Lx LINE L1 6024 6647 -7 4 1461 26 0 0 0 chrX 114864360 114864386 -51785910 + AT_rich Low_complexity Low_complexity 1 26 0 4 1461 25 31 0 0 chrX 114865063 114865095 -51785201 + AT_rich Low_complexity Low_complexity 1 32 0 4 1461 195 129 0 0 chrX 114865372 114865403 -51784893 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4 1461 611 301 88 67 chrX 114866135 114866420 -51783876 - Lx8 LINE L1 -181 7292 7002 4 1461 21 0 0 0 chrX 114866804 114866825 -51783471 + AT_rich Low_complexity Low_complexity 1 21 0 4 1461 4765 80 0 0 chrX 114866959 114867595 -51782701 + L1Md_F2 LINE L1 4951 5586 -297 5 1461 6766 76 18 61 chrX 114867596 114868624 -51781672 + L1Md_F2 LINE L1 5588 6570 -12 5 1461 28 29 0 0 chrX 114868844 114868879 -51781417 + AT_rich Low_complexity Low_complexity 1 35 0 5 1461 21 0 0 0 chrX 114870340 114870361 -51779935 + AT_rich Low_complexity Low_complexity 1 21 0 5 1461 38 61 0 0 chrX 114871195 114871261 -51779035 + AT_rich Low_complexity Low_complexity 1 66 0 5 1461 207 0 0 0 chrX 114871267 114871290 -51779006 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 5 1461 837 242 72 10 chrX 114871670 114872161 -51778135 + Lx5 LINE L1 913 1500 -4377 5 1461 4147 153 3 21 chrX 114872161 114873131 -51777165 + L1VL4 LINE L1 197 1145 -2414 5 1461 4186 182 14 3 chrX 114873149 114873931 -51776365 - L1_Mm LINE L1 -2 5881 5091 5 1461 1743 209 43 0 chrX 114873935 114874355 -51775941 + L1VL4 LINE L1 1208 1645 -1914 5 1461 2402 176 73 10 chrX 114874379 114874969 -51775327 - L1_Mur2 LINE L1 -327 5553 4798 5 1461 264 30 0 0 chrX 114874969 114875002 -51775294 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1461 1897 218 267 14 chrX 114875002 114875063 -51775233 - L1_Mur2 LINE L1 -1083 4797 4737 5 1461 251 130 22 0 chrX 114875064 114875110 -51775186 - L1_Mur2 LINE L1 -1974 3903 3857 5 1461 13647 192 49 15 chrX 114875108 114876322 -51773974 + Lx5 LINE L1 2300 3550 -2327 5 1461 5053 147 49 25 chrX 114876322 114877257 -51773039 - RMER17B LTR ERVK 0 958 1 5 1461 13647 192 49 15 chrX 114877257 114879136 -51771160 + Lx5 LINE L1 3551 5498 -379 5 1461 562 234 0 0 chrX 114879133 114879278 -51771018 + Lx5 LINE L1 5667 5811 -1239 5 1461 862 299 57 107 chrX 114879284 114879725 -51770571 - RLTR23 LTR ERV1 -4 426 8 5 1461 844 320 83 67 chrX 114880399 114882528 -51767768 - MMERGLN-int LTR ERV1 -2354 5252 2924 5 1461 2115 137 16 0 chrX 114882682 114883004 -51767292 + ORR1A2 LTR MaLR 1 327 0 5 1461 429 354 47 34 chrX 114883434 114883927 -51766369 - MMERGLN-int LTR ERV1 -5820 1736 1308 5 1461 270 0 0 0 chrX 114883927 114883957 -51766339 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 1461 413 294 76 22 chrX 114883957 114883996 -51766300 - MMERGLN-int LTR ERV1 -6448 1330 1292 5 1461 489 272 142 127 chrX 114885049 114885466 -51764830 - RLTR23 LTR ERV1 -1 429 7 5 1461 1458 250 21 18 chrX 114885487 114885923 -51764373 + Lx4B LINE L1 5811 6247 -811 5 1461 1357 111 222 0 chrX 114886079 114886331 -51763965 + RMER17B LTR ERVK 1 308 -650 5 1461 441 0 0 0 chrX 114886334 114886383 -51763913 + (TC)n Simple_repeat Simple_repeat 1 49 0 5 1461 30410 86 4 5 chrX 114886385 114890799 -51759497 - L1Md_F2 LINE L1 -13 6569 2191 5 1461 3891 70 0 0 chrX 114890799 114891299 -51758997 + L1Md_F2 LINE L1 6072 6571 -11 5 1461 30410 117 34 6 chrX 114891299 114893133 -51757163 - L1Md_F2 LINE L1 -3693 2190 271 5 1461 810 281 63 53 chrX 114893126 114893411 -51756885 + Lx6 LINE L1 7147 7434 -26 5 1461 514 294 68 32 chrX 114893584 114893848 -51756448 + MTEb LTR MaLR 5 364 -15 5 1461 2491 109 8 0 chrX 114893859 114894277 -51756019 + L1_Mus4 LINE L1 5522 5942 -694 5 1461 407 216 63 0 chrX 114894281 114894392 -51755904 - L1_Mur2 LINE L1 -1916 3961 3844 5 1461 1143 95 0 0 chrX 114895181 114895328 -51754968 + B1_Mus2 SINE Alu 1 147 0 5 1461 207 88 0 0 chrX 114895352 114895386 -51754910 + (CAAAC)n Simple_repeat Simple_repeat 2 35 0 5 1461 24 32 0 0 chrX 114895507 114895538 -51754758 + AT_rich Low_complexity Low_complexity 1 31 0 5 1461 247 287 58 19 chrX 114895606 114895709 -51754587 - Lx8 LINE L1 -18 7455 7349 5 1461 194 431 19 7 chrX 114895827 114895981 -51754315 + L2a LINE L2 2993 3148 -278 5 1461 375 83 0 0 chrX 114896540 114896600 -51753696 + (T)n Simple_repeat Simple_repeat 1 60 0 5 1461 23 68 0 0 chrX 114897214 114897258 -51753038 + AT_rich Low_complexity Low_complexity 1 44 0 5 1461 387 0 0 0 chrX 114897873 114897916 -51752380 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 1461 597 271 34 39 chrX 114898098 114898305 -51751991 - RLTR12B LTR ERVK -311 217 12 5 1461 312 278 97 0 chrX 114898634 114898778 -51751518 + L1M2 LINE L1 3415 3572 -2571 5 1461 23 0 0 0 chrX 114899201 114899224 -51751072 + AT_rich Low_complexity Low_complexity 1 23 0 5 1461 2473 166 34 2 chrX 114899237 114899685 -51750611 - Lx2A1 LINE L1 -3 7005 6544 5 1461 804 317 59 28 chrX 114899791 114899891 -51750405 + MTC LTR MaLR 12 115 -306 5 1461 281 26 0 26 chrX 114899891 114899930 -51750366 + (TTA)n Simple_repeat Simple_repeat 2 39 0 5 1461 1140 69 0 0 chrX 114899930 114900074 -51750222 - B1_Mus2 SINE Alu -2 145 2 5 1461 804 317 59 28 chrX 114900074 114900258 -51750038 + MTC LTR MaLR 116 305 -116 5 1461 468 0 0 0 chrX 114900337 114900389 -51749907 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1461 2394 288 45 18 chrX 114900807 114901535 -51748761 - MERVK26-int LTR ERVK -5 6914 6167 5 1461 321 190 0 0 chrX 114901537 114901595 -51748701 - MERVK26-int LTR ERVK -2128 4791 4734 5 1461 1847 276 21 10 chrX 114901607 114902091 -51748205 - RMER1C Other Other -146 1196 708 5 1461 326 387 58 0 chrX 114902750 114902905 -51747391 + B3 SINE B2 40 203 -13 5 1461 24 32 0 0 chrX 114902905 114902936 -51747360 + AT_rich Low_complexity Low_complexity 1 31 0 5 1461 227 403 44 28 chrX 114902971 114903152 -51747144 + MLT1A LTR MaLR 113 296 -78 5 1461 231 308 73 98 chrX 114903357 114903591 -51746705 + MLT-int LTR MaLR 167 394 -1341 5 1461 428 300 0 35 chrX 114904026 114904140 -51746156 + RSINE1 SINE B4 56 165 0 5 1461 271 336 100 61 chrX 114904421 114904652 -51745644 + MLT-int LTR MaLR 1296 1535 -200 5 1461 46 33 0 0 chrX 114904679 114904739 -51745557 + AT_rich Low_complexity Low_complexity 1 60 0 5 1461 317 328 43 29 chrX 114904970 114905108 -51745188 + Lx8 LINE L1 7105 7244 -229 5 1461 381 356 25 0 chrX 114906160 114906278 -51744018 - B3A SINE B2 -36 162 42 5 1461 629 137 0 0 chrX 114906282 114906377 -51743919 - Lx2 LINE L1 -293 6704 6610 5 1461 4652 57 0 5 chrX 114906389 114906973 -51743323 - L1Md_F2 LINE L1 -10 6572 5992 5 1461 946 241 31 43 chrX 114907009 114907265 -51743031 - RLTR40 LTR ERVK -458 359 107 5 1461 210 71 0 0 chrX 114907311 114907339 -51742957 + (CAA)n Simple_repeat Simple_repeat 3 30 0 5 1461 24 53 0 0 chrX 114907430 114907468 -51742828 + AT_rich Low_complexity Low_complexity 1 38 0 5 1461 22 56 0 0 chrX 114908209 114908245 -51742051 + AT_rich Low_complexity Low_complexity 1 36 0 5 1461 678 301 49 0 chrX 114908248 114908298 -51741998 - B3 SINE B2 -7 209 158 5 1461 474 18 0 0 chrX 114908298 114908353 -51741943 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 1461 678 301 49 0 chrX 114908353 114908485 -51741811 - B3 SINE B2 -59 157 19 5 1461 23 0 0 0 chrX 114908537 114908560 -51741736 + AT_rich Low_complexity Low_complexity 1 23 0 5 1461 23 0 0 0 chrX 114908969 114908992 -51741304 + AT_rich Low_complexity Low_complexity 1 23 0 5 1461 3453 50 0 0 chrX 114909203 114909626 -51740670 - L1Md_F2 LINE L1 -428 6154 5732 5 1461 3985 183 10 3 chrX 114909624 114910354 -51739942 - Lx2 LINE L1 -32 6965 6231 5 1461 286 98 56 56 chrX 114910357 114910411 -51739885 - Lx2 LINE L1 -1153 5844 5791 5 1461 2179 130 24 0 chrX 114910405 114910736 -51739560 + Lx2 LINE L1 5427 5765 -118 5 1461 26 0 0 67 chrX 114910791 114910836 -51739460 + AT_rich Low_complexity Low_complexity 1 42 0 5 1461 950 271 104 21 chrX 114910871 114911158 -51739138 - MTD LTR MaLR -16 403 93 5 1461 244 345 42 35 chrX 114911074 114911218 -51739078 - MT2A LTR ERVL -388 145 1 5 1461 272 254 0 0 chrX 114911605 114911672 -51738624 + L1MA6 LINE L1 6189 6255 -45 5 1461 22 0 0 0 chrX 114911821 114911843 -51738453 + AT_rich Low_complexity Low_complexity 1 22 0 5 1461 22 0 0 0 chrX 114912009 114912031 -51738265 + AT_rich Low_complexity Low_complexity 1 22 0 5 1461 1090 102 0 0 chrX 114912172 114912319 -51737977 + B1_Mm SINE Alu 1 147 0 5 1461 386 63 51 0 chrX 114912321 114912400 -51737896 + (CAAA)n Simple_repeat Simple_repeat 2 84 0 5 1461 609 355 20 23 chrX 114912592 114912935 -51737361 - Lx8 LINE L1 0 7473 7132 5 1461 362 389 76 0 chrX 114913142 114913327 -51736969 - MLT1F LTR MaLR -119 429 231 5 1461 375 256 48 116 chrX 114913324 114913470 -51736826 - MT2A LTR ERVL -397 136 1 5 1461 3045 11 43 0 chrX 114913622 114913974 -51736322 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1461 631 312 15 5 chrX 114914122 114914328 -51735968 - B3 SINE B2 -7 209 2 5 1461 605 282 35 35 chrX 114914942 114915144 -51735152 - B3 SINE B2 0 216 15 5 1461 21 57 0 0 chrX 114915433 114915468 -51734828 + AT_rich Low_complexity Low_complexity 1 35 0 5 1461 899 334 67 41 chrX 114915590 114916198 -51734098 + L1MCb LINE L1 230 853 -5192 5 1461 1221 289 31 8 chrX 114916205 114916565 -51733731 + L1M3e LINE L1 15 382 -6648 5 1461 4467 129 26 6 chrX 114917576 114918272 -51732024 - Lx3A LINE L1 -5 6976 6267 5 1461 27 49 0 0 chrX 114918479 114918520 -51731776 + AT_rich Low_complexity Low_complexity 1 41 0 5 1461 2041 286 35 0 chrX 114918667 114919160 -51731136 + Lx5 LINE L1 6531 7040 -10 5 1461 346 354 36 15 chrX 114919598 114919765 -51730531 - MLT1B LTR MaLR -25 349 189 5 1461 396 59 0 0 chrX 114919895 114919946 -51730350 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1461 256 350 25 25 chrX 114919953 114920073 -51730223 - MLT1B LTR MaLR -261 129 10 5 1461 362 390 33 0 chrX 114920409 114920591 -51729705 - MER76 LTR ERVL -473 218 31 5 1461 25 0 0 0 chrX 114920842 114920867 -51729429 + AT_rich Low_complexity Low_complexity 1 25 0 5 1461 320 286 6 147 chrX 114920879 114921035 -51729261 + B3 SINE B2 81 214 -2 5 1461 431 340 32 5 chrX 114921201 114921390 -51728906 - ERVL-B4-int LTR ERVL -1301 4413 4220 5 1461 1686 322 36 10 chrX 114921424 114922158 -51728138 - ERVL-B4-int LTR ERVL -1490 4271 3407 5 1461 897 365 44 27 chrX 114922173 114922961 -51727335 - ERVL-B4-int LTR ERVL -3903 1811 1010 5 1461 533 320 32 37 chrX 114923308 114923496 -51726800 + B3A SINE B2 7 193 -5 5 1461 6059 97 5 3 chrX 114923517 114924639 -51725657 + L1Md_F2 LINE L1 392 1519 -4364 5 1461 7725 66 1 2 chrX 114924655 114926176 -51724120 - L1Md_F2 LINE L1 0 6582 5064 5 1461 22980 127 56 21 chrX 114926167 114929218 -51721078 + L1Md_F2 LINE L1 1517 4615 -1268 5 1461 7691 65 1 1 chrX 114929218 114930212 -51720084 + L1Md_F2 LINE L1 5587 6580 -2 5 1461 22980 127 56 21 chrX 114930212 114930487 -51719809 + L1Md_F2 LINE L1 4616 4974 -909 5 1461 315 0 0 0 chrX 114930487 114930522 -51719774 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1461 471 35 0 0 chrX 114930522 114930578 -51719718 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 1461 22980 127 56 21 chrX 114930578 114930666 -51719630 + L1Md_F2 LINE L1 4975 5069 -814 5 1461 2887 121 24 39 chrX 114930666 114931158 -51719138 - L1Md_F2 LINE L1 0 6582 6098 5 1461 22980 112 29 13 chrX 114931158 114932128 -51718168 + L1Md_F2 LINE L1 5070 6052 -530 5 1461 1904 127 13 0 chrX 114932149 114932449 -51717847 - L1_Mus1 LINE L1 0 6567 6264 5 1461 529 255 76 9 chrX 114932709 114932919 -51717377 - ERVL-B4-int LTR ERVL -5475 239 16 5 1461 247 360 27 44 chrX 114932948 114933131 -51717165 - MLT2B4 LTR ERVL -10 546 367 5 1461 4308 179 9 29 chrX 114933359 114934052 -51716244 + L1Md_F2 LINE L1 217 1128 -5596 5 1461 2236 36 0 7 chrX 114934052 114934330 -51715966 + L1Md_F3 LINE L1 6295 6570 -14 5 1461 28851 85 48 12 chrX 114934330 114938656 -51711640 + L1Md_F2 LINE L1 1129 5586 -297 5 1461 7707 65 4 1 chrX 114938657 114939649 -51710647 + L1Md_F2 LINE L1 5588 6582 0 5 1461 221 135 19 0 chrX 114939945 114939997 -51710299 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 5 1461 658 269 166 52 chrX 114940836 114941162 -51709134 - ORR1D2 LTR MaLR -7 363 1 5 1461 465 319 59 90 chrX 114941203 114941292 -51709004 + Lx8 LINE L1 6722 6800 -673 6 1461 3606 164 37 9 chrX 114941292 114941936 -51708360 - Lx3B LINE L1 0 6973 6312 6 1461 465 319 59 90 chrX 114941936 114942201 -51708095 + Lx8 LINE L1 6801 7065 -408 6 1461 266 298 117 6 chrX 114942600 114942762 -51707534 - MER33 DNA MER1_type -103 221 42 6 1461 919 295 50 22 chrX 114943098 114943455 -51706841 - ORR1D2 LTR MaLR -3 367 1 6 1461 184 171 118 79 chrX 114943538 114943614 -51706682 - L3b LINE CR1 -261 221 143 6 1461 2169 51 0 0 chrX 114943640 114943913 -51706383 - L1Md_A LINE L1 0 6582 6310 6 1461 198 0 0 0 chrX 114944077 114944099 -51706197 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1461 514 189 47 9 chrX 114946067 114946174 -51704122 + RMER6C LTR ERVK 1 111 -579 6 1461 621 101 0 0 chrX 114946216 114946315 -51703981 + (CAGT)n Simple_repeat Simple_repeat 4 102 0 6 1461 264 149 0 0 chrX 114946530 114946577 -51703719 + (T)n Simple_repeat Simple_repeat 1 47 0 6 1461 718 177 32 0 chrX 114946577 114946701 -51703595 + RMER6C LTR ERVK 518 645 -45 6 1461 357 24 0 0 chrX 114946762 114946804 -51703492 + (TA)n Simple_repeat Simple_repeat 1 42 0 6 1461 940 330 50 24 chrX 114946933 114947208 -51703088 + MT2A LTR ERVL 9 288 -245 6 1461 6560 141 46 8 chrX 114947208 114948274 -51702022 - Lx2 LINE L1 -2 6995 5886 6 1461 5317 136 37 23 chrX 114948274 114949219 -51701077 - RMER17B LTR ERVK 0 958 1 6 1461 6560 141 46 8 chrX 114949219 114949286 -51701010 - Lx2 LINE L1 -1112 5885 5819 6 1461 940 330 50 24 chrX 114949286 114949389 -51700907 + MT2A LTR ERVL 289 397 -136 6 1461 288 0 0 0 chrX 114949393 114949425 -51700871 + (TC)n Simple_repeat Simple_repeat 1 32 0 6 1461 459 35 0 0 chrX 114949425 114949481 -51700815 + (CA)n Simple_repeat Simple_repeat 1 57 0 6 182 786 251 171 79 chrX 114949643 114950162 -51700134 + RMER2 LTR ERV1 1 567 0 6 1462 228 35 0 0 chrX 114950844 114950873 -51699423 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6 1462 3311 40 2 0 chrX 114952191 114952586 -51697710 - MTA_Mm LTR MaLR 0 396 1 6 1462 1272 279 75 10 chrX 114953425 114953812 -51696484 + MTD LTR MaLR 8 419 0 6 1462 29189 5 0 0 chrX 114954065 114958065 -51692231 - L1Md_A LINE L1 0 6582 2583 6 1462 2779 0 0 0 chrX 114958066 114958379 -51691917 + L1Md_A LINE L1 2298 2610 -3273 6 1462 497 314 0 116 chrX 114958845 114959018 -51691278 - RSINE1 SINE B4 0 165 13 6 1462 27117 151 15 14 chrX 114959243 114965411 -51684885 + L1_Mus2 LINE L1 388 6564 -2 6 1462 495 321 65 5 chrX 114966614 114966799 -51683497 - Lx9 LINE L1 -215 7429 7234 6 1462 3081 124 99 0 chrX 114967490 114968013 -51682283 + L1Md_F LINE L1 283 857 -5662 6 1462 38460 11 1 2 chrX 114968014 114974598 -51675698 + L1Md_A LINE L1 1 5586 -297 6 1462 9007 3 0 0 chrX 114974598 114975594 -51674702 + L1Md_A LINE L1 5587 6582 0 6 1462 216 0 0 0 chrX 114975615 114975639 -51674657 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1462 30260 100 3 4 chrX 114975639 114980266 -51670030 + L1Md_F2 LINE L1 964 5586 -297 6 1462 6916 89 15 6 chrX 114980266 114981253 -51669043 + L1Md_F2 LINE L1 5587 6582 0 6 1462 627 379 26 22 chrX 114981863 114982133 -51668163 + B4A SINE B4 2 272 -20 6 1462 216 0 0 0 chrX 114982419 114982443 -51667853 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6 1462 695 139 8 0 chrX 114985440 114985569 -51664727 + (TTCC)n Simple_repeat Simple_repeat 3 132 0 6 1462 328 323 54 77 chrX 114986424 114986592 -51663704 + B3A SINE B2 20 183 -15 6 1462 583 227 0 66 chrX 114986750 114986887 -51663409 + ORR1A4 LTR MaLR 1 128 -201 6 1462 734 209 143 0 chrX 114986882 114987064 -51663232 - ORR1A4-int LTR MaLR -1755 208 1 6 1462 558 205 9 10 chrX 114987068 114987196 -51663100 - ORR1A4 LTR MaLR -14 365 206 6 1462 2097 168 22 0 chrX 114988126 114988496 -51661800 + RMER6D LTR ERVK 4 381 -339 6 1462 1055 284 29 34 chrX 114988906 114989265 -51661031 + RMER1A Other Other 267 544 -522 6 1462 438 20 0 0 chrX 114989282 114989333 -51660963 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1462 180 0 0 0 chrX 114989333 114989353 -51660943 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 1462 3040 68 5 10 chrX 114989569 114989967 -51660329 - MTA_Mm LTR MaLR 0 396 1 6 1462 22 0 0 0 chrX 114990262 114990284 -51660012 + AT_rich Low_complexity Low_complexity 1 22 0 6 1462 329 336 35 0 chrX 114990459 114990572 -51659724 + B4A SINE B4 166 282 -10 6 1462 206 136 0 64 chrX 114990684 114990731 -51659565 + A-rich Low_complexity Low_complexity 4 47 0 6 1462 31363 97 13 6 chrX 114990824 114996167 -51654129 + L1Md_F3 LINE L1 208 5586 -297 6 1462 7733 60 6 0 chrX 114996168 114997158 -51653138 + L1Md_F3 LINE L1 5588 6583 -1 6 1462 5254 60 9 0 chrX 114997699 114998370 -51651926 - L1Md_F2 LINE L1 0 6582 5906 6 1462 1269 63 4 0 chrX 114998450 114998686 -51651610 + (TTC)n Simple_repeat Simple_repeat 1 236 0 6 1462 297 0 0 0 chrX 114999967 115000000 -51650296 + (TTG)n Simple_repeat Simple_repeat 1 33 0 6 1462 282 29 0 0 chrX 115000005 115000040 -51650256 + (GTTTG)n Simple_repeat Simple_repeat 1 35 0 1 1462 528 16 0 0 chrX 115003102 115003163 -51647133 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 1462 921 184 33 6 chrX 115003509 115003689 -51646607 - ORR1A4-int LTR MaLR -1778 185 1 3 1462 1499 210 39 0 chrX 115003693 115004002 -51646294 - ORR1A4 LTR MaLR -8 321 1 3 1462 1689 171 31 34 chrX 115004437 115004788 -51645508 - Lx3C LINE L1 -797 6179 5830 4 1462 4144 157 90 7 chrX 115004788 115005520 -51644776 + Lx3C LINE L1 6175 6967 -9 4 1462 21 57 0 0 chrX 115005531 115005566 -51644730 + AT_rich Low_complexity Low_complexity 1 35 0 5 1462 1589 166 54 6 chrX 115005878 115006194 -51644102 - Lx3A LINE L1 -4 6977 6647 6 1462 2066 126 24 93 chrX 115006217 115006637 -51643659 - Lx3_Mus LINE L1 -814 6195 5805 7 1462 6372 120 14 21 chrX 115006800 115007838 -51642458 - L1_Mus2 LINE L1 -3 6563 5534 8 1462 18507 135 32 13 chrX 115007839 115009410 -51640886 - L1_Mus2 LINE L1 -1059 4824 3183 8 1462 207 0 0 0 chrX 115009410 115009433 -51640863 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 9 1462 18507 135 32 13 chrX 115009433 115011104 -51639192 - L1_Mus2 LINE L1 -2701 3182 1519 8 1462 1992 173 35 0 chrX 115011109 115011508 -51638788 - L1_Mus2 LINE L1 -5449 1167 755 8 1462 479 284 21 7 chrX 115011532 115011674 -51638622 - L1_Mus2 LINE L1 -5798 818 675 8 1462 363 246 21 165 chrX 115011769 115011947 -51638349 - L1VL1 LINE L1 -6055 367 18 1 1462 954 296 62 42 chrX 115011973 115012314 -51637982 - MTD LTR MaLR -14 405 68 1 1462 1386 153 65 4 chrX 115012314 115012577 -51637719 - Lx3A LINE L1 0 6654 6376 6 1462 954 305 65 55 chrX 115012577 115012610 -51637686 - MTD LTR MaLR -352 67 35 1 1462 386 308 115 9 chrX 115012742 115013000 -51637296 - L1MCa LINE L1 -5495 1256 901 1 1462 7214 90 2 4 chrX 115013034 115014248 -51636048 - L1_Mus1 LINE L1 -1 6566 5356 1 1462 551 307 91 14 chrX 115014418 115014626 -51635670 - MTD LTR MaLR 0 419 196 1 1462 1202 239 15 141 chrX 115014644 115015254 -51635042 - Lx7 LINE L1 -3 7693 7161 1 1462 909 126 0 47 chrX 115015318 115015468 -51634828 + B1_Mus1 SINE Alu 5 147 -1 1 1462 187 31 30 30 chrX 115015477 115015510 -51634786 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 1 1462 239 256 189 0 chrX 115016417 115016507 -51633789 - B1F2 SINE Alu 0 117 11 1 1462 1192 173 9 9 chrX 115016967 115017177 -51633119 + URR1B DNA MER1_type 1 210 -15 1 1462 26 30 0 0 chrX 115017375 115017408 -51632888 + AT_rich Low_complexity Low_complexity 1 33 0 2 1462 433 335 39 65 chrX 115017560 115017592 -51632704 - B4 SINE B4 0 292 264 2 1462 336 24 0 0 chrX 115017592 115017633 -51632663 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1462 433 335 39 65 chrX 115017633 115017830 -51632466 - B4 SINE B4 -29 263 69 2 1462 293 94 38 0 chrX 115017892 115017945 -51632351 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 2 1462 1009 52 88 15 chrX 115017945 115018082 -51632214 - B1_Mus1 SINE Alu 0 148 2 2 1462 658 358 48 18 chrX 115018135 115018570 -51631726 - FordPrefect DNA Tip100 -275 1408 961 2 1462 231 465 41 18 chrX 115018593 115018812 -51631484 - FordPrefect DNA Tip100 -824 859 636 2 1462 1602 216 10 0 chrX 115019308 115019600 -51630696 + ORR1B1 LTR MaLR 1 295 -99 2 1462 2204 210 38 31 chrX 115019602 115019906 -51630390 + L1_Mur3 LINE L1 4789 5091 -789 2 1462 3485 33 30 89 chrX 115019906 115020411 -51629885 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1462 2204 210 38 31 chrX 115020411 115020690 -51629606 + L1_Mur3 LINE L1 5092 5376 -504 2 1462 572 203 24 205 chrX 115020692 115021063 -51629233 - L1_Mur2 LINE L1 -3702 2178 1875 2 1462 967 236 28 144 chrX 115021052 115021532 -51628764 - L1_Mur2 LINE L1 -5762 1324 901 2 1462 1734 189 20 9 chrX 115021547 115021888 -51628408 - RLTR15 LTR ERVK -14 345 1 3 1462 984 99 21 0 chrX 115022170 115022312 -51627984 + B1_Mm SINE Alu 3 147 0 3 1462 192 77 0 0 chrX 115022312 115022338 -51627958 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1462 528 287 121 0 chrX 115023296 115023470 -51626826 + MT2A LTR ERVL 3 197 -336 3 1462 522 0 0 0 chrX 115023708 115023766 -51626530 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 1462 447 310 10 61 chrX 115025544 115025740 -51624556 - B3A SINE B2 -11 187 2 3 1462 858 126 0 0 chrX 115026356 115026491 -51623805 + (GGAA)n Simple_repeat Simple_repeat 3 137 0 3 1462 22 35 0 0 chrX 115026523 115026552 -51623744 + AT_rich Low_complexity Low_complexity 1 29 0 3 1462 180 0 0 0 chrX 115026764 115026784 -51623512 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 1462 432 257 35 17 chrX 115026784 115026890 -51623406 - B1_Mur2 SINE Alu -13 136 27 3 1462 33 25 0 0 chrX 115027985 115028025 -51622271 + AT_rich Low_complexity Low_complexity 1 40 0 4 1462 378 264 26 52 chrX 115029080 115029196 -51621100 + MTEb LTR MaLR 267 379 0 4 1462 621 0 0 0 chrX 115029258 115029327 -51620969 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 1462 262 163 0 0 chrX 115029331 115029380 -51620916 - L1_Mur3 LINE L1 -2428 3452 3404 4 1462 243 0 0 0 chrX 115029382 115029409 -51620887 + (TTA)n Simple_repeat Simple_repeat 1 27 0 4 1462 3476 167 45 21 chrX 115029410 115030081 -51620215 - Lx3C LINE L1 -3 6973 6287 4 1462 416 140 54 0 chrX 115030079 115030172 -51620124 + L1_Mus3 LINE L1 6541 6638 0 4 1462 6996 160 11 5 chrX 115030176 115031478 -51618818 - L1_Mur2 LINE L1 -1483 4394 3086 4 1462 906 230 14 18 chrX 115031474 115031691 -51618605 - L1VL2 LINE L1 -6054 281 66 4 1462 830 151 8 5 chrX 115031691 115031858 -51618438 - Lx3C LINE L1 -1178 5798 5630 4 1462 1691 208 33 30 chrX 115031959 115032321 -51617975 + ORR1B2 LTR MaLR 5 367 0 4 1462 25 0 0 0 chrX 115032473 115032498 -51617798 + AT_rich Low_complexity Low_complexity 1 25 0 5 1462 477 321 99 29 chrX 115032613 115032886 -51617410 - B4A SINE B4 0 292 1 5 1462 872 92 0 0 chrX 115033016 115033135 -51617161 + B1_Mus1 SINE Alu 30 148 0 5 1462 393 39 0 0 chrX 115033137 115033188 -51617108 + (CAA)n Simple_repeat Simple_repeat 2 52 0 5 1462 509 320 97 15 chrX 115034575 115035093 -51615203 - L1MA6 LINE L1 -354 5946 5387 5 1462 201 74 0 0 chrX 115035123 115035150 -51615146 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 5 1462 1105 198 43 8 chrX 115035197 115035431 -51614865 - Lx2B LINE L1 -4 6996 6755 5 1462 314 366 0 0 chrX 115035439 115035532 -51614764 + B1F2 SINE Alu 2 94 -55 5 1462 5835 12 0 5 chrX 115035676 115036339 -51613957 - L1Md_T LINE L1 0 6582 5923 5 1462 3930 17 5 18 chrX 115036339 115036893 -51613403 + L1Md_T LINE L1 5434 5980 -602 5 1462 344 59 20 0 chrX 115037294 115037345 -51612951 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1462 321 278 68 6 chrX 115038335 115038512 -51611784 + L1_Mur3 LINE L1 1984 2171 -3709 6 1462 261 135 0 0 chrX 115038679 115038731 -51611565 + (A)n Simple_repeat Simple_repeat 1 52 0 6 1462 380 345 96 6 chrX 115038731 115038897 -51611399 + B4A SINE B4 27 207 -85 6 1462 474 75 0 0 chrX 115038989 115039056 -51611240 + (CA)n Simple_repeat Simple_repeat 1 67 0 6 1462 259 329 73 35 chrX 115039405 115039748 -51610548 + L1_Mur3 LINE L1 4404 4759 -1121 6 1462 25 65 0 0 chrX 115039821 115039867 -51610429 + AT_rich Low_complexity Low_complexity 1 46 0 6 1462 302 326 127 46 chrX 115039922 115040292 -51610004 + L1_Rod LINE L1 5431 5830 -17 6 1462 594 28 0 0 chrX 115040342 115040414 -51609882 + (TG)n Simple_repeat Simple_repeat 2 73 0 6 1462 249 180 0 0 chrX 115040417 115040467 -51609829 + GA-rich Low_complexity Low_complexity 1 50 0 6 1462 2120 198 19 74 chrX 115040524 115041118 -51609178 + RLTR31_Mm LTR ERVK 1 561 0 6 1462 4223 168 44 0 chrX 115041197 115041929 -51608367 + Lx3B LINE L1 6076 6839 -134 6 1462 4942 249 68 7 chrX 115041929 115041961 -51608335 + ORR1B1-int LTR MaLR 54 92 -1417 7 1462 3076 81 9 27 chrX 115041961 115042404 -51607892 + L1Md_F2 LINE L1 6148 6582 0 7 1462 4942 249 68 7 chrX 115042404 115043744 -51606552 + ORR1B1-int LTR MaLR 93 1509 0 7 1462 1451 227 16 92 chrX 115043744 115044170 -51606126 + ORR1B1 LTR MaLR 1 394 0 7 1462 518 153 143 0 chrX 115044357 115044455 -51605841 + RMER17C-int LTR ERVK 2756 2867 -371 7 1462 225 0 0 0 chrX 115044458 115044483 -51605813 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 1462 1803 135 11 7 chrX 115044502 115044785 -51605511 + RMER17C-int LTR ERVK 2934 3217 -21 7 1462 1651 132 143 35 chrX 115044797 115045112 -51605184 - Lx LINE L1 -8 6646 6298 7 1462 1329 216 18 74 chrX 115045112 115045546 -51604750 + RMER17C LTR ERVK 1 410 0 7 1462 324 384 44 42 chrX 115045594 115045977 -51604319 + Lx8 LINE L1 7006 7389 -84 7 1462 852 292 153 70 chrX 115046111 115046594 -51603702 + MT2B LTR ERVL 1 540 -61 7 1462 191 62 0 59 chrX 115046595 115046629 -51603667 + (CATATA)n Simple_repeat Simple_repeat 4 35 0 7 1462 6953 125 4 11 chrX 115046734 115047782 -51602514 - L1_Mus4 LINE L1 -7 6629 5589 7 1462 1698 126 21 4 chrX 115047789 115048068 -51602228 + MusHAL1 LINE L1 1516 1799 -913 7 1462 21 0 0 0 chrX 115048846 115048867 -51601429 + AT_rich Low_complexity Low_complexity 1 21 0 8 1462 1076 222 80 4 chrX 115049494 115049743 -51600553 - RLTR28 LTR ERVL -14 510 243 8 1462 758 163 52 7 chrX 115050382 115050536 -51599760 - B2_Mm2 SINE B2 -4 191 31 8 1462 273 29 0 0 chrX 115050536 115050570 -51599726 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 8 1462 6327 61 1 2 chrX 115050573 115051365 -51598931 - L1Md_F2 LINE L1 -25 6557 5767 8 1462 16295 64 9 16 chrX 115051364 115053879 -51596417 - L1Md_A LINE L1 -2473 3410 928 8 1462 1254 195 170 0 chrX 115053877 115054154 -51596142 - L1Md_A LINE L1 -5987 629 306 8 1462 221 226 32 4 chrX 115054164 115054226 -51596070 - B3 SINE B2 -135 60 1 8 1462 7648 57 11 2 chrX 115054385 115055890 -51594406 - L1Md_F2 LINE L1 -1 6581 5063 8 1462 21 57 0 0 chrX 115055890 115055925 -51594371 + AT_rich Low_complexity Low_complexity 1 35 0 8 1462 295 270 14 28 chrX 115055926 115056067 -51594229 - L1M5 LINE L1 -3532 2614 2476 8 1462 1453 175 41 20 chrX 115056178 115056470 -51593826 - RLTR10E LTR ERVK -13 298 1 8 1462 10585 95 13 50 chrX 115056560 115058172 -51592124 - MMERVK10C-int LTR ERVK -268 7313 5761 9 1462 3168 107 0 14 chrX 115058163 115058609 -51591687 - MMERVK10C-int LTR ERVK -1939 5642 5203 9 1462 772 92 41 8 chrX 115058878 115058999 -51591297 - MMERVK10C-int LTR ERVK -2920 4661 4537 9 1462 594 168 16 5 chrX 115059011 115059137 -51591159 - MMERVK10C-int LTR ERVK -2380 2464 2357 9 1462 3369 140 150 2 chrX 115059140 115059754 -51590542 - ETnERV2-int LTR ERVK -3135 4271 3567 9 1462 587 235 29 7 chrX 115059762 115059899 -51590397 - ETnERV2-int LTR ERVK -4632 2774 2635 9 1462 252 291 0 55 chrX 115059911 115060002 -51590294 - ETnERV2-int LTR ERVK -4867 2539 2454 9 1462 488 221 88 0 chrX 115060015 115060128 -51590168 - RMER16-int LTR ERVK -5077 1060 938 9 1462 1641 181 109 30 chrX 115060142 115060607 -51589689 - RMER16-int LTR ERVK -4750 656 251 9 1462 4439 135 30 28 chrX 115060719 115061588 -51588708 - IAPEY3-int LTR ERVK -6629 952 3 9 1462 1425 171 63 14 chrX 115061606 115061890 -51588406 - RLTR10E LTR ERVK -13 298 1 9 1462 457 333 105 22 chrX 115061917 115062098 -51588198 + B3 SINE B2 18 213 -3 9 1462 318 73 0 0 chrX 115062524 115062565 -51587731 - L1Md_F3 LINE L1 -480 6104 6064 9 1462 2736 58 0 0 chrX 115062565 115062910 -51587386 + L1Md_F3 LINE L1 5696 6040 -542 9 1462 34 24 0 0 chrX 115063792 115063833 -51586463 + AT_rich Low_complexity Low_complexity 1 41 0 9 1462 304 249 51 98 chrX 115064120 115064334 -51585962 - L1MC LINE L1 -2866 3280 3077 9 1462 34 72 0 0 chrX 115064345 115064414 -51585882 + AT_rich Low_complexity Low_complexity 1 69 0 9 1462 267 312 105 18 chrX 115064591 115064705 -51585591 - B4A SINE B4 -49 243 120 9 1462 213 229 20 59 chrX 115065138 115065189 -51585107 - B2_Mm2 SINE B2 -71 124 76 1 1462 227 342 61 0 chrX 115065217 115065331 -51584965 + B1F SINE Alu 20 140 -9 1 1462 450 176 0 0 chrX 115065331 115065416 -51584880 + (TATATG)n Simple_repeat Simple_repeat 6 90 0 1 1462 23 33 0 0 chrX 115065419 115065449 -51584847 + AT_rich Low_complexity Low_complexity 1 30 0 1 1462 232 358 36 27 chrX 115065784 115065896 -51584400 + MLT1D LTR MaLR 355 467 -38 1 1462 21 0 0 0 chrX 115065899 115065920 -51584376 + AT_rich Low_complexity Low_complexity 1 21 0 1 1462 21 57 0 0 chrX 115066001 115066036 -51584260 + AT_rich Low_complexity Low_complexity 1 35 0 1 1462 431 392 37 25 chrX 115066132 115066456 -51583840 + MLT1D-int LTR MaLR 313 640 -731 1 1462 480 372 10 20 chrX 115066760 115066955 -51583341 + B3 SINE B2 9 201 -15 1 1462 356 354 94 17 chrX 115066978 115067281 -51583015 + MLT1D-int LTR MaLR 940 1273 -216 1 1462 348 342 8 8 chrX 115067275 115067393 -51582903 - ORR1B2 LTR MaLR -230 137 20 1 1462 670 323 0 8 chrX 115067463 115067697 -51582599 + Lx7 LINE L1 7136 7367 -329 1 1462 22 0 0 0 chrX 115067723 115067745 -51582551 + AT_rich Low_complexity Low_complexity 1 22 0 1 1462 781 254 29 86 chrX 115067770 115068119 -51582177 + Lx7 LINE L1 7368 7696 0 1 1462 523 122 10 20 chrX 115068395 115068407 -51581889 + polypurine Low_complexity Low_complexity 2 12 0 1 1462 713 99 38 8 chrX 115068407 115068626 -51581670 + L1_Mus3 LINE L1 6502 6638 0 1 1462 5354 78 6 1 chrX 115070028 115070749 -51579547 + L1_Mus1 LINE L1 5844 6567 0 1 1462 636 194 11 79 chrX 115070805 115070995 -51579301 - Lx LINE L1 0 6654 6478 1 1462 3155 159 26 2 chrX 115071138 115071680 -51578616 + Lx3_Mus LINE L1 6436 6990 -19 1 1462 482 224 7 0 chrX 115071681 115071828 -51578468 + GA-rich Low_complexity Low_complexity 1 148 0 1 1462 333 0 0 0 chrX 115072295 115072332 -51577964 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1462 2252 115 5 73 chrX 115073290 115073313 -51576983 + RLTR10D LTR ERVK 1 21 -338 1 1462 3501 124 63 41 chrX 115073313 115073902 -51576394 + RLTR1D LTR ERV1 4 605 0 1 1462 2252 115 5 73 chrX 115073902 115074263 -51576033 + RLTR10D LTR ERVK 22 359 0 1 1462 5675 77 3 3 chrX 115074263 115075010 -51575286 + IAP-d-int LTR ERVK 1 747 -5795 1 1462 21870 63 7 17 chrX 115075069 115077930 -51572366 + IAP-d-int LTR ERVK 3188 6021 -521 1 1462 3239 82 0 0 chrX 115077933 115078348 -51571948 + IAP-d-int LTR ERVK 6128 6542 0 1 1462 2264 120 5 75 chrX 115078348 115078734 -51571562 + RLTR10D LTR ERVK 1 359 0 1 1462 30 0 0 0 chrX 115078976 115079006 -51571290 + AT_rich Low_complexity Low_complexity 1 30 0 1 1462 27 49 0 0 chrX 115079113 115079154 -51571142 + AT_rich Low_complexity Low_complexity 1 41 0 1 1462 225 65 0 0 chrX 115079402 115079433 -51570863 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1 1462 24 77 0 0 chrX 115080194 115080246 -51570050 + AT_rich Low_complexity Low_complexity 1 52 0 1 1462 440 62 0 15 chrX 115080541 115080606 -51569690 + (TCC)n Simple_repeat Simple_repeat 1 64 0 1 1462 450 255 0 0 chrX 115080610 115080708 -51569588 - B1_Mm SINE Alu 0 147 50 1 1462 280 256 20 91 chrX 115080652 115080751 -51569545 - MT2B LTR ERVL -341 260 169 1 1462 645 80 0 0 chrX 115080834 115080922 -51569374 + (GAAAA)n Simple_repeat Simple_repeat 3 90 0 1 1463 1003 311 45 22 chrX 115081595 115081908 -51568388 + MTD LTR MaLR 86 405 -14 1 1463 489 313 14 114 chrX 115081921 115082141 -51568155 + Lx9 LINE L1 6372 6569 -1075 1 1463 415 321 163 39 chrX 115082247 115082633 -51567663 - L1MD LINE L1 -1941 4205 3772 1 1463 22 0 0 0 chrX 115082803 115082825 -51567471 + AT_rich Low_complexity Low_complexity 1 22 0 1 1463 3427 69 51 0 chrX 115083028 115083480 -51566816 + MT2C_Mm LTR ERVL 1 475 0 1 1463 25 0 0 0 chrX 115083665 115083690 -51566606 + AT_rich Low_complexity Low_complexity 1 25 0 1 1463 758 295 19 10 chrX 115084527 115084736 -51565560 + B3 SINE B2 6 216 0 1 1463 327 396 47 35 chrX 115085138 115085392 -51564904 - MLT1J1 LTR MaLR -170 274 18 1 1463 42 20 0 0 chrX 115086180 115086229 -51564067 + AT_rich Low_complexity Low_complexity 1 49 0 1 1463 253 260 169 52 chrX 115086298 115086375 -51563921 + B1_Mus2 SINE Alu 6 91 -56 1 1463 2593 186 40 16 chrX 115086855 115087358 -51562938 + Lx2 LINE L1 6479 6993 -4 1 1463 197 65 32 0 chrX 115087383 115087414 -51562882 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1 1463 393 75 0 0 chrX 115088261 115088314 -51561982 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 1463 226 170 21 0 chrX 115088848 115088895 -51561401 - Lx3C LINE L1 -1142 5834 5787 1 1463 6120 134 61 16 chrX 115088896 115089967 -51560329 + Lx3B LINE L1 5855 6973 0 1 1463 443 304 43 65 chrX 115090079 115090232 -51560064 + RMER15 LTR ERVL 379 527 -48 1 1463 781 208 19 7 chrX 115090232 115090387 -51559909 - RMER6D LTR ERVK 0 720 564 1 1463 501 176 143 36 chrX 115090419 115090531 -51559765 - RMER6D LTR ERVK -566 124 1 1 1463 217 211 0 0 chrX 115091003 115091041 -51559255 + polypurine Low_complexity Low_complexity 2 39 0 1 1463 440 134 195 0 chrX 115091096 115091178 -51559118 + RMER6D LTR ERVK 1 98 -622 1 1463 604 238 7 40 chrX 115091187 115091336 -51558960 + ORR1C2 LTR MaLR 52 195 -189 1 1463 277 157 0 54 chrX 115091338 115091412 -51558884 + CT-rich Low_complexity Low_complexity 6 75 0 1 1463 619 243 128 51 chrX 115091413 115091608 -51558688 + ORR1C2 LTR MaLR 174 383 -1 1 1463 406 167 0 0 chrX 115091734 115091818 -51558478 + Lx3A LINE L1 6898 6981 0 1 1463 609 266 0 0 chrX 115091846 115091974 -51558322 + B3 SINE B2 10 137 -79 1 1463 214 182 15 15 chrX 115093152 115093219 -51557077 + (TATG)n Simple_repeat Simple_repeat 3 69 0 1 1463 404 58 34 0 chrX 115094017 115094084 -51556212 - Lx LINE L1 -1319 5731 5658 1 1463 3732 166 42 11 chrX 115094090 115094796 -51555500 + Lx2 LINE L1 5751 6478 -519 1 1463 236 379 57 11 chrX 115095097 115095185 -51555111 - B1F SINE Alu -57 92 1 1 1463 728 333 23 12 chrX 115095541 115095799 -51554497 - RMER15 LTR ERVL -52 523 263 1 1463 1030 218 62 21 chrX 115096325 115096617 -51553679 + RMER6C LTR ERVK 112 384 -336 1 1463 200 184 0 0 chrX 115096873 115096911 -51553385 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1463 8081 136 15 15 chrX 115096985 115099005 -51551291 - L1_Mus3 LINE L1 0 6638 4641 1 1463 213 65 0 0 chrX 115099005 115099036 -51551260 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1463 8081 155 22 30 chrX 115099036 115099253 -51551043 - L1_Mus3 LINE L1 -1243 4640 4410 1 1463 360 0 0 0 chrX 115099299 115099339 -51550957 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1463 21 0 0 0 chrX 115099575 115099596 -51550700 + AT_rich Low_complexity Low_complexity 1 21 0 1 1463 203 159 45 0 chrX 115099790 115099834 -51550462 + (CATATA)n Simple_repeat Simple_repeat 1 46 0 1 1463 566 304 0 47 chrX 115099852 115100063 -51550233 + B3 SINE B2 2 202 -14 1 1463 3603 126 27 9 chrX 115100063 115100617 -51549679 - Lx LINE L1 -158 6496 5933 1 1463 213 108 0 0 chrX 115101402 115101439 -51548857 + (TCTA)n Simple_repeat Simple_repeat 1 37 0 1 1463 273 57 0 0 chrX 115101527 115101562 -51548734 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1463 1890 121 14 0 chrX 115101568 115101848 -51548448 - L1_Mus3 LINE L1 -392 6246 5963 1 1463 2621 120 77 0 chrX 115101848 115102266 -51548030 + L1_Mus3 LINE L1 6189 6638 0 1 1463 336 24 0 0 chrX 115102319 115102360 -51547936 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 1463 293 0 56 37 chrX 115103232 115103286 -51547010 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 1 1463 296 268 0 0 chrX 115103809 115103880 -51546416 + CT-rich Low_complexity Low_complexity 2 72 0 1 1463 1074 140 0 0 chrX 115104988 115105167 -51545129 + (GAA)n Simple_repeat Simple_repeat 2 180 0 1 1463 180 77 0 0 chrX 115105168 115105194 -51545102 + (GGA)n Simple_repeat Simple_repeat 3 28 0 1 1463 228 305 11 58 chrX 115105206 115105394 -51544902 + L1_Mur3 LINE L1 1527 1705 -4175 1 1463 369 248 16 8 chrX 115105502 115105624 -51544672 - L1_Mus1 LINE L1 -1325 4558 4436 1 1463 7242 103 9 1 chrX 115105607 115106987 -51543309 - L1_Mus1 LINE L1 0 6567 5175 1 1463 986 324 43 42 chrX 115106990 115107805 -51542491 + L1_Mur3 LINE L1 1762 2577 -3303 1 1463 183 42 0 0 chrX 115108023 115108047 -51542249 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1463 201 74 0 0 chrX 115108581 115108608 -51541688 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1463 1096 115 0 0 chrX 115109530 115109687 -51540609 + L1Md_F LINE L1 170 326 -6290 1 1463 18319 124 1 69 chrX 115109676 115112485 -51537811 + L1Md_F LINE L1 1561 4261 -1619 1 1463 1008 205 126 55 chrX 115112485 115112795 -51537501 - IAPEY3_LTR LTR ERVK 0 332 1 1 1463 18319 124 1 69 chrX 115112795 115114152 -51536144 + L1Md_F LINE L1 4262 5568 -312 1 1463 7832 63 0 0 chrX 115114165 115115145 -51535151 + L1Md_F2 LINE L1 5587 6566 -16 1 1463 224 225 12 36 chrX 115115154 115115237 -51535059 + (CAAA)n Simple_repeat Simple_repeat 2 82 0 1 1463 612 374 122 27 chrX 115115292 115116229 -51534067 + Charlie7 DNA MER1_type 522 1547 -1065 1 1463 269 26 26 0 chrX 115116473 115116511 -51533785 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 1 1463 363 23 0 0 chrX 115117447 115117491 -51532805 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 1 1463 869 300 62 66 chrX 115117574 115117986 -51532310 - RLTR31_Mur LTR ERVK 0 553 141 1 1463 567 0 0 0 chrX 115117986 115118049 -51532247 + (TC)n Simple_repeat Simple_repeat 1 63 0 1 1463 869 264 80 73 chrX 115118049 115118179 -51532117 - RLTR31_Mur LTR ERVK -192 229 62 1 1463 517 269 62 12 chrX 115118204 115118243 -51532053 + L1_Mur2 LINE L1 502 541 -6545 1 1463 6888 101 25 5 chrX 115118243 115119246 -51531050 - RLTR13D5 LTR ERVK 0 1023 1 1 1463 517 269 62 12 chrX 115119246 115119368 -51530928 + L1_Mur2 LINE L1 542 671 -6415 1 1463 4258 176 43 48 chrX 115119336 115120309 -51529987 + L1_Mur2 LINE L1 417 1381 -4496 1 1463 4622 162 39 35 chrX 115120300 115121298 -51528998 + L1_Mur2 LINE L1 1802 2803 -3074 1 1463 5828 195 30 24 chrX 115121300 115122584 -51527712 + Lx4A LINE L1 5767 7058 0 1 1463 30 27 0 0 chrX 115122589 115122626 -51527670 + AT_rich Low_complexity Low_complexity 1 37 0 1 1463 50 71 0 0 chrX 115122700 115122799 -51527497 + AT_rich Low_complexity Low_complexity 1 99 0 1 1463 236 257 138 60 chrX 115123390 115123659 -51526637 + L1MD LINE L1 4671 4960 -1186 1 1463 681 123 0 0 chrX 115123725 115123831 -51526465 + (TA)n Simple_repeat Simple_repeat 2 107 0 1 1463 399 328 26 8 chrX 115124301 115124418 -51525878 + RSINE1 SINE B4 3 121 -44 1 1463 285 29 0 0 chrX 115124428 115124462 -51525834 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 1463 280 237 21 21 chrX 115124464 115124559 -51525737 + GA-rich Low_complexity Low_complexity 2 96 0 1 1463 360 111 0 0 chrX 115124608 115124671 -51525625 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1463 475 370 69 36 chrX 115124708 115125100 -51525196 + MTE-int LTR MaLR 63 467 -1113 1 1463 1343 232 3 10 chrX 115125394 115125686 -51524610 + RMER21B LTR ERV1 550 839 -3 1 1463 765 304 86 19 chrX 115125783 115126108 -51524188 - Lx8 LINE L1 -5 7468 7122 1 1463 6320 148 15 20 chrX 115127250 115128485 -51521811 + Lx LINE L1 5425 6653 -1 2 1463 200 167 0 0 chrX 115128772 115128802 -51521494 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1463 187 392 48 0 chrX 115129022 115129147 -51521149 - MIR SINE MIR -114 148 18 2 1463 1855 327 65 39 chrX 115129894 115131486 -51518810 + Lx8 LINE L1 5364 6994 -479 2 1463 339 324 82 79 chrX 115131717 115132022 -51518274 + RLTR26 LTR ERVK 168 473 -169 2 1463 300 336 112 27 chrX 115132622 115132882 -51517414 + L1MC4 LINE L1 7135 7416 -626 2 1463 182 65 65 0 chrX 115133161 115133192 -51517104 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 2 1463 419 351 97 45 chrX 115133487 115133839 -51516457 + L1MEf LINE L1 514 883 -5317 2 1463 577 198 95 0 chrX 115133894 115134020 -51516276 + B1_Mus1 SINE Alu 11 148 0 2 1463 2284 90 22 28 chrX 115134427 115134782 -51515514 - L1_Mus4 LINE L1 -27 6609 6257 2 1463 2968 29 0 0 chrX 115134998 115135344 -51514952 - ORR1A0 LTR MaLR 0 346 1 2 1463 1416 232 20 17 chrX 115135822 115136168 -51514128 - Lx5 LINE L1 -67 6983 6637 2 1463 3804 212 26 24 chrX 115136167 115137374 -51512922 - Lx5 LINE L1 -580 6470 5254 2 1463 273 29 0 0 chrX 115137374 115137408 -51512888 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1463 3064 196 18 38 chrX 115137408 115137453 -51512843 - Lx5 LINE L1 -624 5253 5209 2 1463 249 279 49 55 chrX 115137782 115137945 -51512351 - L1M4 LINE L1 -1349 4797 4636 2 1463 24 32 0 0 chrX 115137996 115138027 -51512269 + AT_rich Low_complexity Low_complexity 1 31 0 2 1463 568 157 29 0 chrX 115138143 115138245 -51512051 - Lx2A1 LINE L1 -668 6340 6236 2 1463 243 278 22 0 chrX 115138276 115138366 -51511930 - L1M2 LINE L1 -515 5785 5694 2 1463 234 0 0 0 chrX 115138644 115138670 -51511626 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 2 1463 658 169 14 0 chrX 115138775 115138917 -51511379 + (TA)n Simple_repeat Simple_repeat 2 145 0 2 1463 677 124 0 8 chrX 115139282 115139412 -51510884 + (TA)n Simple_repeat Simple_repeat 2 130 0 2 1463 414 0 0 0 chrX 115140200 115140246 -51510050 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 1463 288 0 0 0 chrX 115140246 115140277 -51510019 + (GA)n Simple_repeat Simple_repeat 2 33 0 2 1463 23 54 0 0 chrX 115140321 115140358 -51509938 + AT_rich Low_complexity Low_complexity 1 37 0 2 1463 316 339 40 28 chrX 115140365 115140541 -51509755 - B3A SINE B2 0 198 21 2 1463 377 284 19 19 chrX 115140858 115140962 -51509334 + MLT1A0 LTR MaLR 262 365 0 2 1463 504 338 94 32 chrX 115140968 115141473 -51508823 - L1MD LINE L1 -2663 3483 2953 2 1463 590 347 46 61 chrX 115141481 115141892 -51508404 - MTD LTR MaLR -14 405 1 2 1463 396 359 127 24 chrX 115141939 115142364 -51507932 - L1MD LINE L1 -3329 2817 2349 2 1463 4047 187 40 2 chrX 115142461 115143266 -51507030 + Lx2 LINE L1 6162 6996 -1 2 1463 426 79 0 0 chrX 115143300 115143363 -51506933 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1463 388 410 0 7 chrX 115143365 115143510 -51506786 - RSINE1 SINE B4 -19 146 3 2 1463 770 300 48 64 chrX 115143591 115143999 -51506297 + Lx7 LINE L1 6908 7299 -397 2 1463 737 185 105 0 chrX 115144126 115144288 -51506008 - Lx2 LINE L1 -1 6996 6818 2 1463 237 176 20 0 chrX 115144601 115144652 -51505644 - Lx8 LINE L1 -6 7467 7416 2 1463 533 285 172 21 chrX 115144710 115144992 -51505304 + L1_Mur3 LINE L1 5501 5815 -32 2 1463 264 59 0 0 chrX 115145068 115145102 -51505194 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1463 561 68 0 0 chrX 115145109 115145183 -51505113 + (TA)n Simple_repeat Simple_repeat 1 74 0 2 1463 1113 268 41 100 chrX 115145340 115145954 -51504342 + Lx9 LINE L1 5327 5942 -1702 2 1463 456 67 0 0 chrX 115145954 115146014 -51504282 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 1463 893 136 0 7 chrX 115146799 115146954 -51503342 + (TA)n Simple_repeat Simple_repeat 2 155 0 2 1463 1247 274 157 5 chrX 115146954 115147425 -51502871 + Lx4B LINE L1 5990 6527 -531 2 1463 36 62 0 0 chrX 115147650 115147714 -51502582 + AT_rich Low_complexity Low_complexity 1 64 0 2 1463 316 323 144 0 chrX 115147769 115147970 -51502326 - L1M4 LINE L1 -2382 3764 3535 2 1463 26 93 0 0 chrX 115148073 115148148 -51502148 + AT_rich Low_complexity Low_complexity 1 75 0 2 1463 422 167 0 12 chrX 115148365 115148450 -51501846 + (TA)n Simple_repeat Simple_repeat 2 85 0 2 1463 973 109 0 33 chrX 115148610 115148762 -51501534 + B1_Mus2 SINE Alu 1 147 0 2 1463 189 0 0 0 chrX 115148762 115148783 -51501513 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1463 24 53 0 0 chrX 115148902 115148940 -51501356 + AT_rich Low_complexity Low_complexity 1 38 0 2 1463 6948 122 5 10 chrX 115148957 115150507 -51499789 - L1_Mus3 LINE L1 -2 6636 5094 2 1463 944 38 0 22 chrX 115150509 115150645 -51499651 - L1Md_F3 LINE L1 -14 6570 6438 2 1463 1311 146 36 0 chrX 115150645 115150700 -51499596 - L1_Mus3 LINE L1 -1192 4691 4637 2 1463 186 43 0 0 chrX 115150700 115150723 -51499573 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 1463 1311 146 36 0 chrX 115150723 115150887 -51499409 - L1_Mus3 LINE L1 -1247 4636 4465 2 1463 372 314 13 36 chrX 115151856 115151986 -51498310 + B3 SINE B2 2 131 -62 2 1463 3550 207 9 64 chrX 115151994 115152788 -51497508 - Lx5 LINE L1 -49 7001 6252 2 1463 2816 38 0 118 chrX 115152788 115153202 -51497094 - RLTR10B2 LTR ERVK 0 365 1 2 1463 4216 88 0 107 chrX 115153202 115153893 -51496403 - MMERVK10C-int LTR ERVK 0 7581 6965 2 1463 1493 108 100 0 chrX 115153893 115154124 -51496172 - IAP-d-int LTR ERVK -1287 5255 5002 2 1463 506 315 33 30 chrX 115154134 115154498 -51495798 - MMERVK10C-int LTR ERVK -5479 1063 738 2 1463 2786 53 0 3 chrX 115154554 115154896 -51495400 - RLTR10-int LTR ERVK -995 992 652 2 1463 302 95 0 0 chrX 115154899 115154941 -51495355 - RLTR10-int LTR ERVK -6405 137 96 2 1463 1035 101 12 6 chrX 115154941 115155110 -51495186 + (TTTCC)n Simple_repeat Simple_repeat 4 173 0 2 1463 237 258 0 16 chrX 115155112 115155175 -51495121 + T-rich Low_complexity Low_complexity 2 63 0 2 1463 1196 99 0 34 chrX 115155219 115155397 -51494899 - RLTR10-int LTR ERVK -1775 212 41 2 1463 2844 55 0 64 chrX 115155407 115155797 -51494499 - RLTR10B2 LTR ERVK 0 365 1 2 1463 675 245 3 113 chrX 115155797 115156133 -51494163 - Lx5 LINE L1 -793 6257 5959 2 1463 21 36 0 0 chrX 115156424 115156452 -51493844 + AT_rich Low_complexity Low_complexity 1 28 0 2 1463 316 304 86 16 chrX 115156871 115157058 -51493238 + L1M4 LINE L1 5119 5318 -828 2 1463 543 332 55 35 chrX 115157298 115157697 -51492599 + L1M4 LINE L1 5330 5736 -438 2 1463 243 0 45 45 chrX 115158486 115158530 -51491766 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 2 1463 21 57 0 0 chrX 115159034 115159069 -51491227 + AT_rich Low_complexity Low_complexity 1 35 0 2 1463 201 94 0 0 chrX 115159110 115159142 -51491154 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 2 1463 703 338 100 68 chrX 115160158 115160587 -51489709 - MT2A LTR ERVL 0 533 91 2 1463 1180 365 52 32 chrX 115160589 115161394 -51488902 + Lx8 LINE L1 6538 7358 -115 2 1463 2008 256 148 50 chrX 115162060 115162697 -51487599 + Lx6 LINE L1 6749 7447 -13 2 1463 3020 143 35 2 chrX 115163777 115164294 -51486002 + RLTR13D1 LTR ERVK 10 543 -359 2 1463 3519 76 16 10 chrX 115164267 115164684 -51485612 + RLTR13D1 LTR ERVK 227 647 -159 2 1463 4831 20 0 0 chrX 115164684 115165242 -51485054 - L1Md_A LINE L1 0 6582 6025 2 1463 3519 133 59 11 chrX 115165242 115165378 -51484918 + RLTR13D1 LTR ERVK 648 720 -86 2 1463 21 57 0 0 chrX 115165378 115165413 -51484883 + AT_rich Low_complexity Low_complexity 1 35 0 2 1463 391 288 7 21 chrX 115165722 115165864 -51484432 + Lx5 LINE L1 6755 6894 -156 2 1463 330 389 14 0 chrX 115165885 115166024 -51484272 - ID_B1 SINE B4 -17 207 67 2 1463 336 324 72 84 chrX 115166103 115166589 -51483707 + L1M5 LINE L1 2860 3339 -2807 2 1463 226 295 35 18 chrX 115167053 115167167 -51483129 + L1M5 LINE L1 3640 3755 -2391 2 1463 1560 311 77 10 chrX 115167413 115168099 -51482197 + Lx8 LINE L1 6327 7058 -415 2 1463 23 0 0 0 chrX 115168142 115168165 -51482131 + AT_rich Low_complexity Low_complexity 1 23 0 2 1463 419 157 24 0 chrX 115168192 115168275 -51482021 + (CATA)n Simple_repeat Simple_repeat 2 86 0 2 1463 1279 270 18 39 chrX 115168284 115168903 -51481393 + L1_Mur3 LINE L1 2058 2632 -1282 2 1463 931 223 12 16 chrX 115168890 115169136 -51481160 + L1_Mur3 LINE L1 4861 5105 -775 2 1463 1834 202 105 131 chrX 115169139 115169874 -51480422 + L1_Mur3 LINE L1 3909 4624 -1256 2 1463 243 0 0 0 chrX 115169874 115169901 -51480395 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1463 1274 224 320 90 chrX 115169901 115170003 -51480293 + L1_Mur3 LINE L1 4624 4786 -1091 2 1463 206 62 0 30 chrX 115170003 115170036 -51480260 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1463 1652 204 173 70 chrX 115170036 115170219 -51480077 + L1_Mur3 LINE L1 5162 5233 -650 2 1463 3197 72 7 5 chrX 115170219 115170652 -51479644 - L1_Mus2 LINE L1 -4 6562 6129 2 1463 1652 181 8 47 chrX 115170652 115170924 -51479372 + L1_Mur3 LINE L1 5234 5506 -377 2 1463 3033 154 82 15 chrX 115170926 115171474 -51478822 + Lx LINE L1 6059 6643 -11 2 1463 738 253 149 31 chrX 115171473 115171828 -51478468 + L1_Mur3 LINE L1 4821 5217 -663 2 1463 329 45 43 29 chrX 115171839 115171908 -51478388 + (TTTG)n Simple_repeat Simple_repeat 2 71 0 2 1463 917 230 5 50 chrX 115171910 115172130 -51478166 + Lx6 LINE L1 6540 6749 -711 2 1463 342 286 41 96 chrX 115172204 115172424 -51477872 + RLTR15 LTR ERVK 34 241 -118 2 1463 1533 298 30 20 chrX 115172564 115173023 -51477273 + Lx6 LINE L1 6820 7283 -177 2 1463 282 125 0 0 chrX 115173037 115173085 -51477211 + (TAAA)n Simple_repeat Simple_repeat 4 51 0 2 1463 12569 213 45 45 chrX 115173827 115177548 -51472748 + Lx2 LINE L1 768 4487 -1399 2 1463 7771 172 18 2 chrX 115177528 115179092 -51471204 + Lx2 LINE L1 5381 6969 -28 2 1463 23 33 0 0 chrX 115179439 115179469 -51470827 + AT_rich Low_complexity Low_complexity 1 30 0 2 1463 315 0 0 0 chrX 115179660 115179695 -51470601 + (A)n Simple_repeat Simple_repeat 1 35 0 2 1463 197 335 60 54 chrX 115180165 115180332 -51469964 + MIRc SINE MIR 38 205 -63 2 1463 373 145 0 0 chrX 115180607 115180669 -51469627 + B1_Mus1 SINE Alu 2 63 -85 2 1463 1887 99 18 4 chrX 115180669 115180943 -51469353 + L1_Mus2 LINE L1 6289 6566 0 2 1463 324 0 0 0 chrX 115181034 115181070 -51469226 + (CAA)n Simple_repeat Simple_repeat 1 36 0 2 1463 1267 67 105 35 chrX 115181409 115181609 -51468687 + L1_Mus1 LINE L1 6353 6566 -1 2 1463 2669 106 15 22 chrX 115182009 115182416 -51467880 - RLTR9E LTR ERVK 0 409 6 2 1463 407 340 14 45 chrX 115182588 115182810 -51467486 + B3 SINE B2 1 215 -1 2 1463 21 0 0 0 chrX 115182894 115182915 -51467381 + AT_rich Low_complexity Low_complexity 1 21 0 2 1463 11762 59 4 1 chrX 115182978 115185182 -51465114 - L1Md_F2 LINE L1 0 6582 4371 2 1463 421 104 0 0 chrX 115185182 115185249 -51465047 + L1_Mm LINE L1 3235 3301 -2582 2 1463 821 157 0 7 chrX 115185895 115186049 -51464247 + CT-rich Low_complexity Low_complexity 2 154 0 2 1463 895 286 14 100 chrX 115186221 115186571 -51463725 + MTE2b LTR MaLR 20 339 -40 3 1463 219 88 0 0 chrX 115186571 115186605 -51463691 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 1463 441 315 54 30 chrX 115186668 115186835 -51463461 - B4A SINE B4 -83 209 39 3 1463 674 317 66 67 chrX 115187338 115188069 -51462227 - L1MC LINE L1 -1428 4718 3989 3 1463 392 338 14 34 chrX 115188393 115188540 -51461756 - B1_Mur1 SINE Alu -2 147 4 3 1463 344 299 69 0 chrX 115188548 115188779 -51461517 - L1MC LINE L1 -3171 2975 2729 3 1463 6450 111 64 5 chrX 115188755 115189776 -51460520 + L1_Mus3 LINE L1 5544 6637 -1 3 1463 273 325 65 28 chrX 115189772 115189987 -51460309 - L1MC LINE L1 -3454 2692 2470 3 1463 261 362 81 17 chrX 115190672 115190846 -51459450 + L1MCa LINE L1 105 289 -6219 3 1463 744 257 31 21 chrX 115191166 115191179 -51459117 - B3 SINE B2 0 216 204 3 1463 1422 236 26 56 chrX 115191179 115191569 -51458727 - ORR1C1 LTR MaLR 0 378 1 3 1463 744 257 31 21 chrX 115191569 115191746 -51458550 - B3 SINE B2 -13 203 25 3 1463 25 51 0 0 chrX 115192174 115192213 -51458083 + AT_rich Low_complexity Low_complexity 1 39 0 3 1463 476 354 24 18 chrX 115192244 115192408 -51457888 - B3A SINE B2 -26 172 8 3 1463 228 35 0 0 chrX 115192535 115192564 -51457732 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1463 5553 70 56 1 chrX 115192755 115193488 -51456808 - IAPEY3-int LTR ERVK 0 7680 6908 3 1463 15302 138 40 43 chrX 115193490 115196258 -51454038 - IAPEY3-int LTR ERVK -4395 3285 524 3 1463 697 217 32 6 chrX 115196258 115196416 -51453880 - IAPEY3-int LTR ERVK -7518 162 1 3 1463 2389 77 6 0 chrX 115196416 115196740 -51453556 - IAPEY2_LTR LTR ERVK 0 357 32 3 1463 292 146 21 0 chrX 115196752 115196800 -51453496 + RLTR13C1 LTR ERVK 742 790 -193 3 1463 1071 147 11 11 chrX 115196928 115197107 -51453189 - LTRIS3 LTR ERV1 0 512 334 3 1463 758 177 64 33 chrX 115197102 115197309 -51452987 - RLTR13D4 LTR ERVK -17 1016 779 3 1463 22 0 0 0 chrX 115197464 115197486 -51452810 + AT_rich Low_complexity Low_complexity 1 22 0 3 1463 354 107 0 0 chrX 115197486 115197542 -51452754 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 1463 531 341 17 22 chrX 115197544 115197724 -51452572 - B3 SINE B2 -34 182 4 3 1463 1004 65 0 0 chrX 115199406 115199530 -51450766 - L1_Mus2 LINE L1 -259 6307 6184 3 1463 1697 73 9 4 chrX 115199530 115199763 -51450533 + L1_Mus2 LINE L1 6333 6566 0 3 1463 694 264 10 57 chrX 115200102 115200311 -51449985 - MTD LTR MaLR 0 419 221 3 1463 26 64 0 0 chrX 115200956 115201003 -51449293 + AT_rich Low_complexity Low_complexity 1 47 0 3 1463 4081 212 42 28 chrX 115201104 115202043 -51448253 - Lx4B LINE L1 -1 7057 6106 3 1463 461 233 8 23 chrX 115202042 115202174 -51448122 + Lx4B LINE L1 5936 6065 -993 3 1463 252 410 0 0 chrX 115202177 115202260 -51448036 - RSINE1 SINE B4 -80 85 3 3 1463 21 0 0 0 chrX 115202433 115202454 -51447842 + AT_rich Low_complexity Low_complexity 1 21 0 3 1463 26 93 0 0 chrX 115203144 115203219 -51447077 + AT_rich Low_complexity Low_complexity 1 75 0 3 1463 5753 146 8 5 chrX 115203615 115204597 -51445699 + L1VL2 LINE L1 96 1080 -2535 3 1463 16453 187 12 18 chrX 115204592 115205603 -51444693 + Lx LINE L1 2510 3488 -2395 3 1463 207 0 0 0 chrX 115205603 115205626 -51444670 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1463 16453 175 21 15 chrX 115205626 115208748 -51441548 + Lx LINE L1 3489 6646 -8 3 1463 514 368 59 46 chrX 115208752 115209191 -51441105 - MT2A LTR ERVL -74 459 15 3 1463 267 339 58 0 chrX 115209234 115209355 -51440941 - MERVL_2A-int LTR ERVL -36 5678 5551 3 1463 1142 68 7 0 chrX 115209521 115209667 -51440629 + B1_Mus2 SINE Alu 1 147 0 3 1463 249 58 58 0 chrX 115209678 115209730 -51440566 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 3 1463 547 331 72 39 chrX 115209749 115210082 -51440214 - MERVL_2A-int LTR ERVL -276 5485 5142 3 1463 933 270 54 7 chrX 115210095 115210375 -51439921 - MERVL_2A-int LTR ERVL -2759 3002 2710 3 1463 412 335 59 20 chrX 115210555 115210759 -51439537 - MERVL_2A-int LTR ERVL -3778 1979 1768 3 1463 905 264 193 88 chrX 115210759 115211179 -51439117 + MT2A LTR ERVL 1 464 -69 3 1463 31 0 0 0 chrX 115211188 115211219 -51439077 + AT_rich Low_complexity Low_complexity 1 31 0 3 1463 604 222 79 7 chrX 115211226 115211396 -51438900 - ORR1B1 LTR MaLR 0 394 166 3 1463 1141 221 9 9 chrX 115211529 115211762 -51438534 - RMER6D LTR ERVK -487 233 1 3 1463 235 341 24 0 chrX 115211784 115211869 -51438427 - ORR1B1 LTR MaLR -288 91 5 3 1463 258 351 45 0 chrX 115212091 115212245 -51438051 - RMER30 DNA MER1_type -32 170 10 3 1464 23 0 0 0 chrX 115212667 115212690 -51437606 + AT_rich Low_complexity Low_complexity 1 23 0 3 1464 31 26 0 0 chrX 115212927 115212965 -51437331 + AT_rich Low_complexity Low_complexity 1 38 0 3 1464 6314 164 8 26 chrX 115213297 115215010 -51435286 - Lx LINE L1 -6 6648 4956 3 1464 460 174 35 0 chrX 115215002 115215088 -51435208 + L1_Mm LINE L1 4047 4135 -1748 3 1464 2584 25 9 0 chrX 115215088 115215404 -51434892 + MTA_Mm LTR MaLR 78 396 0 3 1464 9069 38 2 2 chrX 115215404 115216502 -51433794 + MTA_Mm-int LTR MaLR 1 1098 0 3 1464 3499 18 2 0 chrX 115216502 115216897 -51433399 + MTA_Mm LTR MaLR 1 396 0 3 1464 3764 184 18 8 chrX 115216899 115217669 -51432627 + L1_Mur2 LINE L1 4178 4955 -922 3 1464 3938 142 119 2 chrX 115217689 115218897 -51431399 + L1VL2 LINE L1 64 1425 -2190 3 1464 1618 91 21 0 chrX 115218924 115219167 -51431129 + L1VL2 LINE L1 2142 2389 -1226 3 1464 7081 192 15 41 chrX 115219162 115219254 -51431042 + L1_Mur1 LINE L1 3059 3150 -2736 3 1464 398 36 0 18 chrX 115219254 115219311 -51430985 + (CAAAA)n Simple_repeat Simple_repeat 5 60 0 3 1464 7081 192 15 41 chrX 115219311 115220068 -51430228 + L1_Mur1 LINE L1 3151 3860 -2026 3 1464 207 0 0 0 chrX 115220068 115220091 -51430205 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1464 7081 192 15 41 chrX 115220091 115220623 -51429673 + L1_Mur1 LINE L1 3861 4399 -1487 3 1464 2942 66 7 42 chrX 115220623 115221033 -51429263 + MTA_Mm LTR MaLR 1 396 0 3 1464 7081 192 15 41 chrX 115221033 115221306 -51428990 + L1_Mur1 LINE L1 4400 4672 -1214 3 1464 261 0 0 0 chrX 115221306 115221335 -51428961 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 3 1464 619 162 0 8 chrX 115221340 115221458 -51428838 + Lx LINE L1 6533 6649 -5 3 1464 22 35 0 0 chrX 115221677 115221706 -51428590 + AT_rich Low_complexity Low_complexity 1 29 0 3 1464 473 335 27 43 chrX 115221824 115222008 -51428288 + ID_B1 SINE B4 6 186 -38 3 1464 236 260 6 19 chrX 115222214 115222375 -51427921 + GA-rich Low_complexity Low_complexity 1 158 0 3 1464 318 309 78 73 chrX 115222421 115222601 -51427695 - B3A SINE B2 0 216 36 3 1464 216 135 0 0 chrX 115223653 115223690 -51426606 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1464 180 0 0 0 chrX 115224399 115224419 -51425877 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 1464 280 287 11 0 chrX 115224563 115224657 -51425639 + (TA)n Simple_repeat Simple_repeat 1 95 0 3 1464 195 69 0 0 chrX 115225186 115225215 -51425081 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 1464 381 131 0 0 chrX 115225213 115225274 -51425022 + (T)n Simple_repeat Simple_repeat 1 61 0 3 1464 1074 89 7 0 chrX 115225274 115225420 -51424876 - B1_Mus1 SINE Alu 0 148 2 3 1464 369 179 0 0 chrX 115225933 115226011 -51424285 + Lx7 LINE L1 7611 7688 -8 3 1464 445 308 109 50 chrX 115227762 115228349 -51421947 - L1_Mur3 LINE L1 -54 5826 5146 3 1464 465 316 25 35 chrX 115228502 115228699 -51421597 - B3A SINE B2 -3 195 1 3 1464 266 291 16 12 chrX 115228755 115228906 -51421390 - L1_Mur3 LINE L1 -2829 3018 2870 3 1464 807 67 0 0 chrX 115228921 115229025 -51421271 - B1_Mm SINE Alu -2 145 42 3 1464 280 247 0 61 chrX 115228953 115229035 -51421261 - RLTR25A LTR ERVK -516 587 511 3 1464 264 295 21 41 chrX 115229037 115229182 -51421114 - L1_Mur3 LINE L1 -2989 2858 2717 3 1464 712 327 139 16 chrX 115229182 115229549 -51420747 - MTD LTR MaLR 0 419 8 3 1464 234 321 25 13 chrX 115230085 115230164 -51420132 - ID_B1 SINE B4 -38 186 107 3 1464 7167 108 11 6 chrX 115230349 115231387 -51418909 + L1_Mus3 LINE L1 5589 6631 -7 3 1464 487 328 0 70 chrX 115231633 115231820 -51418476 + B3A SINE B2 11 184 -14 3 1464 387 0 0 0 chrX 115231978 115232021 -51418275 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1464 183 184 0 0 chrX 115232021 115232059 -51418237 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1464 944 17 67 0 chrX 115232221 115232340 -51417956 - L1Md_F2 LINE L1 -38 6544 6418 3 1464 993 9 0 0 chrX 115232341 115232457 -51417839 - MT2_Mm LTR ERVL -377 116 1 3 1464 314 0 0 0 chrX 115232457 115232495 -51417801 - MERVL-int LTR ERVL 0 5485 5448 3 1464 372 179 46 35 chrX 115232495 115232582 -51417714 - ORR1A3-int LTR MaLR -1323 640 553 3 1464 1993 36 4 0 chrX 115232582 115232829 -51417467 - MERVL-int LTR ERVL -125 5360 5113 3 1464 5231 40 0 9 chrX 115232829 115233475 -51416821 - L1Md_F2 LINE L1 -159 6423 5811 3 1464 358 299 121 28 chrX 115235397 115235538 -51414758 - B4A SINE B4 -35 257 104 3 1464 824 169 0 13 chrX 115235543 115235693 -51414603 - L1_Mur2 LINE L1 -1255 4622 4475 3 1464 3062 125 77 65 chrX 115235693 115235892 -51414404 + ORR1A2-int LTR MaLR 823 1030 -933 3 1464 2601 71 0 30 chrX 115235892 115236254 -51414042 + L1Md_F2 LINE L1 6224 6574 -8 3 1464 3062 125 77 65 chrX 115236254 115236652 -51413644 + ORR1A2-int LTR MaLR 1031 1427 -536 3 1464 1388 60 6 0 chrX 115236652 115236834 -51413462 - L1_Mus3 LINE L1 -786 5852 5670 3 1464 2761 106 32 2 chrX 115236835 115237243 -51413053 + L1_Mus2 LINE L1 6147 6566 0 3 1464 264 61 0 0 chrX 115237245 115237294 -51413002 + L1Md_F2 LINE L1 6533 6581 -1 3 1464 189 0 0 0 chrX 115237317 115237338 -51412958 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 3 1464 3181 158 11 7 chrX 115237338 115237879 -51412417 + ORR1A2-int LTR MaLR 1420 1963 0 3 1464 1988 149 16 0 chrX 115237879 115238201 -51412095 + ORR1A2 LTR MaLR 1 327 0 3 1464 430 162 0 0 chrX 115238201 115238275 -51412021 - L1_Mur2 LINE L1 -1924 3953 3880 3 1464 207 170 0 36 chrX 115238277 115238332 -51411964 + T-rich Low_complexity Low_complexity 1 53 0 3 1464 268 246 15 0 chrX 115238377 115238442 -51411854 - MLT1D LTR MaLR -353 152 87 3 1464 2129 178 9 16 chrX 115238442 115238797 -51411499 - L1_Mur2 LINE L1 -2046 3831 3477 3 1464 312 48 0 0 chrX 115238797 115238839 -51411457 + (TTAA)n Simple_repeat Simple_repeat 3 44 0 3 1464 2129 178 9 16 chrX 115238839 115238916 -51411380 - L1_Mur2 LINE L1 -2401 3476 3402 3 1464 2932 45 0 0 chrX 115238928 115239283 -51411013 - L1Md_T LINE L1 0 6582 6228 3 1464 1630 170 150 35 chrX 115239283 115239522 -51410774 - L1_Mur2 LINE L1 -2472 3405 3118 3 1464 465 19 0 0 chrX 115239522 115239576 -51410720 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 1464 1630 170 150 35 chrX 115239576 115239769 -51410527 - L1_Mur2 LINE L1 -2760 3117 2923 3 1464 3844 229 32 23 chrX 115239768 115240045 -51410251 - L1_Mur2 LINE L1 -3560 2317 2063 3 1464 192 40 0 0 chrX 115240045 115240070 -51410226 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1464 3844 219 40 20 chrX 115240070 115241165 -51409131 - L1_Mur2 LINE L1 -3815 2062 920 3 1464 261 0 0 0 chrX 115241564 115241593 -51408703 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1464 3895 190 124 49 chrX 115242311 115243272 -51407024 - RLTR13D4 LTR ERVK 0 1033 1 3 1464 21 89 0 0 chrX 115243804 115243860 -51406436 + AT_rich Low_complexity Low_complexity 1 56 0 3 1464 2780 93 5 38 chrX 115244136 115244560 -51405736 + L1_Mus3 LINE L1 6229 6638 0 3 1464 306 0 0 0 chrX 115244774 115244808 -51405488 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 1464 231 36 0 0 chrX 115244808 115244835 -51405461 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 1464 867 299 71 18 chrX 115244922 115245214 -51405082 + Lx9 LINE L1 7066 7369 -275 3 1464 2246 224 67 38 chrX 115245214 115245799 -51404497 + RLTR1D LTR ERV1 4 605 0 3 1464 867 299 71 18 chrX 115245799 115245887 -51404409 + Lx9 LINE L1 7370 7465 -179 3 1464 5225 57 0 9 chrX 115246529 115247199 -51403097 - L1Md_F2 LINE L1 -2 6580 5917 3 1464 238 262 9 61 chrX 115247294 115247408 -51402888 - Lx9 LINE L1 -7 7637 7530 4 1464 1271 304 57 56 chrX 115247454 115247836 -51402460 + Lx9 LINE L1 6623 7019 -625 4 1464 360 0 0 0 chrX 115247836 115247876 -51402420 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1464 1271 304 57 56 chrX 115247876 115248302 -51401994 + Lx9 LINE L1 7020 7432 -212 4 1464 26 30 0 0 chrX 115248502 115248535 -51401761 + AT_rich Low_complexity Low_complexity 1 33 0 4 1464 6647 158 71 11 chrX 115248545 115249644 -51400652 + L1_Mur1 LINE L1 3 1178 -5806 4 1464 558 99 0 0 chrX 115249644 115249735 -51400561 + L1_Mus2 LINE L1 6476 6566 0 4 1464 6647 121 5 16 chrX 115249735 115250304 -51399992 + L1_Mur1 LINE L1 1179 1739 -4147 4 1464 385 62 125 0 chrX 115250311 115250375 -51399921 + L1_Mur1 LINE L1 3020 3091 -2795 4 1464 3031 68 22 152 chrX 115250376 115250930 -51399366 - RLTR45 LTR ERVK 0 482 1 4 1464 7206 45 0 0 chrX 115250930 115251774 -51398522 - RLTR45-int LTR ERVK 0 7244 6401 4 1464 235 281 21 105 chrX 115251774 115251917 -51398379 + LTR50 LTR ERVL 136 266 -529 4 1464 583 293 0 0 chrX 115251917 115252074 -51398222 - RNERVK23-int LTR ERVK -673 7544 7388 4 1464 2556 69 0 0 chrX 115252425 115252742 -51397554 - RLTR45-int LTR ERVK -5599 1645 1329 4 1464 485 271 21 21 chrX 115253126 115253269 -51397027 - RNERVK23-int LTR ERVK -1880 6337 6195 4 1464 3025 319 60 46 chrX 115253630 115256727 -51393569 - RNERVK23-int LTR ERVK -2469 5748 2318 4 1464 732 121 35 0 chrX 115257008 115257124 -51393172 - RLTR45-int LTR ERVK -6212 1032 913 4 1464 1791 50 0 0 chrX 115257243 115257462 -51392834 - RLTR45-int LTR ERVK -6334 910 692 4 1464 269 277 0 0 chrX 115257524 115257607 -51392689 - RLTR45-int LTR ERVK -4987 1494 1412 4 1464 1057 70 0 40 chrX 115257818 115257968 -51392328 - RLTR45-int LTR ERVK -6552 692 549 4 1464 4144 81 9 31 chrX 115258720 115259304 -51390992 - RLTR45-int LTR ERVK -6673 571 1 4 1464 3032 68 22 150 chrX 115259304 115259857 -51390439 - RLTR45 LTR ERVK 0 482 1 4 1464 5478 132 5 17 chrX 115259857 115260820 -51389476 + Lx3_Mus LINE L1 3087 4038 -1848 4 1464 9734 133 10 9 chrX 115260831 115263346 -51386950 + Lx3_Mus LINE L1 4339 6857 -152 4 1464 25 51 0 0 chrX 115263349 115263388 -51386908 + AT_rich Low_complexity Low_complexity 1 39 0 4 1464 299 222 0 16 chrX 115263755 115263819 -51386477 - B1F1 SINE Alu 0 149 87 4 1464 5403 162 15 25 chrX 115263810 115264777 -51385519 - RMER17B LTR ERVK -23 935 1 4 1464 23 0 0 0 chrX 115264835 115264858 -51385438 + AT_rich Low_complexity Low_complexity 1 23 0 4 1464 24 0 0 0 chrX 115265093 115265117 -51385179 + AT_rich Low_complexity Low_complexity 1 24 0 4 1464 299 394 22 47 chrX 115265318 115265550 -51384746 - MLT1D LTR MaLR 0 505 280 4 1464 33996 86 4 6 chrX 115266092 115272205 -51378091 - L1Md_F2 LINE L1 -3 6579 481 4 1464 252 313 17 17 chrX 115272239 115272356 -51377940 - Lx6 LINE L1 -54 7406 7290 4 1464 792 296 45 39 chrX 115272591 115272925 -51377371 + Lx6 LINE L1 7104 7439 -21 4 1464 274 333 63 0 chrX 115272956 115273067 -51377229 + MLT1E1 LTR MaLR 488 605 -49 4 1464 311 65 22 0 chrX 115273253 115273299 -51376997 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1464 1313 210 82 6 chrX 115273652 115273935 -51376361 + ORR1B1 LTR MaLR 3 268 -126 4 1464 30 89 0 0 chrX 115274055 115274134 -51376162 + AT_rich Low_complexity Low_complexity 1 79 0 4 1464 206 68 91 0 chrX 115274230 115274274 -51376022 + A-rich Low_complexity Low_complexity 3 50 0 4 1464 23 92 0 0 chrX 115275076 115275141 -51375155 + AT_rich Low_complexity Low_complexity 1 65 0 4 1464 4827 81 6 3 chrX 115275494 115276149 -51374147 + L1_Mus1 LINE L1 5911 6567 0 4 1464 327 284 77 14 chrX 115276190 115276333 -51373963 + Lx7 LINE L1 6956 7107 -589 4 1464 226 330 11 11 chrX 115276381 115276476 -51373820 + Lx7 LINE L1 7239 7333 -363 4 1464 325 356 36 43 chrX 115277065 115277203 -51373093 - ID_B1 SINE B4 -5 219 83 4 1464 27 106 0 0 chrX 115277212 115277316 -51372980 + AT_rich Low_complexity Low_complexity 1 104 0 4 1464 31 26 0 0 chrX 115277752 115277790 -51372506 + AT_rich Low_complexity Low_complexity 1 38 0 4 1464 5041 142 40 17 chrX 115277793 115278680 -51371616 - Lx3A LINE L1 -4 6977 6071 4 1464 7311 120 0 2 chrX 115278684 115279984 -51370312 + L1_Mus4 LINE L1 5335 6631 -5 4 1464 2700 129 12 15 chrX 115279992 115280471 -51369825 + L1_Mur1 LINE L1 3573 4050 -1836 4 1464 5640 161 32 21 chrX 115280468 115281818 -51368478 - L1_Mur1 LINE L1 -4445 1441 16 4 1464 353 344 139 12 chrX 115281840 115282249 -51368047 - L1M4c LINE L1 -4827 1557 1097 4 1464 388 312 53 70 chrX 115282296 115282596 -51367700 - L1M4c LINE L1 -5385 999 705 4 1464 246 105 0 0 chrX 115283001 115283039 -51367257 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1464 4291 178 57 6 chrX 115283075 115283934 -51366362 - Lx LINE L1 -7 6647 5745 4 1464 450 107 0 0 chrX 115283935 115284010 -51366286 + MusHAL1 LINE L1 1865 1939 -773 4 1464 15068 165 18 28 chrX 115284012 115285623 -51364673 - L1_Mm LINE L1 -1195 4688 3070 4 1464 627 71 0 0 chrX 115285623 115285708 -51364588 + (TTTC)n Simple_repeat Simple_repeat 4 88 0 4 1464 15068 165 18 28 chrX 115285708 115287127 -51363169 - L1_Mm LINE L1 -2814 3069 1692 4 1464 543 285 20 9 chrX 115287132 115287311 -51362985 - MusHAL1 LINE L1 -3048 512 368 4 1464 308 316 19 4 chrX 115287367 115287480 -51362816 - MTD LTR MaLR -218 201 77 4 1464 594 41 0 0 chrX 115287485 115287558 -51362738 + (TTTTC)n Simple_repeat Simple_repeat 4 76 0 4 1464 3668 113 11 4 chrX 115287574 115288122 -51362174 - L1_Mus3 LINE L1 -6 6632 6081 4 1464 693 126 0 18 chrX 115288124 115288237 -51362059 - L1VL1 LINE L1 -6251 171 61 4 1464 21 82 0 0 chrX 115288320 115288369 -51361927 + AT_rich Low_complexity Low_complexity 1 49 0 4 1464 21 36 0 0 chrX 115288624 115288652 -51361644 + AT_rich Low_complexity Low_complexity 1 28 0 4 1464 406 302 42 121 chrX 115289060 115289275 -51361021 - B3A SINE B2 0 198 1 4 1464 207 365 29 7 chrX 115289691 115289829 -51360467 + MIR SINE MIR 72 212 -50 4 1464 27 73 0 0 chrX 115289832 115289887 -51360409 + AT_rich Low_complexity Low_complexity 1 55 0 4 1464 283 340 46 20 chrX 115290350 115290503 -51359793 + RMER30 DNA MER1_type 34 190 -12 4 1464 2288 122 8 14 chrX 115290748 115291157 -51359139 - L1_Mus4 LINE L1 0 6636 6260 4 1464 465 280 0 17 chrX 115291209 115291329 -51358967 - PB1D9 SINE Alu 0 120 3 4 1464 384 77 0 0 chrX 115291766 115291818 -51358478 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1464 212 328 0 0 chrX 115291925 115291992 -51358304 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 4 1464 647 372 39 9 chrX 115292098 115292640 -51357656 + ERVL-int LTR ERVL 743 1300 -4457 4 1464 836 299 146 29 chrX 115292952 115293619 -51356677 + ERVL-B4-int LTR ERVL 2574 3318 -2396 4 1464 661 305 52 24 chrX 115293786 115294075 -51356221 + ERVL-B4-int LTR ERVL 4254 4550 -1207 4 1464 10112 59 1 30 chrX 115294197 115296187 -51354109 + L1Md_A LINE L1 622 2545 -3338 4 1464 3006 41 11 0 chrX 115296191 115296560 -51353736 + L1Md_F2 LINE L1 6210 6582 0 4 1464 498 376 65 48 chrX 115296658 115297030 -51353266 + MLT2B1 LTR ERVL 81 458 -62 4 1464 1492 264 56 40 chrX 115297448 115297997 -51352299 - RLTR20A LTR ERVK 0 577 12 4 1464 186 43 0 0 chrX 115298068 115298091 -51352205 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1464 483 18 0 0 chrX 115298255 115298311 -51351985 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1464 360 97 0 0 chrX 115298311 115298373 -51351923 + (GA)n Simple_repeat Simple_repeat 2 63 0 4 1464 26 0 0 0 chrX 115298548 115298574 -51351722 + AT_rich Low_complexity Low_complexity 1 26 0 4 1464 282 226 12 0 chrX 115299658 115299742 -51350554 + (TA)n Simple_repeat Simple_repeat 2 86 0 4 1464 3299 151 75 7 chrX 115300054 115300615 -51349681 + MT2B LTR ERVL 3 601 0 4 1464 4346 219 10 61 chrX 115300616 115301717 -51348579 + MERVL-int LTR ERVL 2 1046 -4439 4 1464 5904 13 1 0 chrX 115301717 115302393 -51347903 - L1Md_A LINE L1 -278 5605 4929 4 1464 8171 40 1 0 chrX 115302393 115303375 -51346921 + L1Md_A LINE L1 5598 6580 -2 4 1464 252 250 0 0 chrX 115303377 115303433 -51346863 + MERVL-int LTR ERVL 1042 1097 -4388 4 1464 1067 102 0 26 chrX 115303433 115303584 -51346712 + B1_Mm SINE Alu 1 147 0 4 1464 206 224 0 0 chrX 115303584 115303642 -51346654 + A-rich Low_complexity Low_complexity 1 58 0 4 1464 640 182 31 8 chrX 115303644 115303771 -51346525 + MERVL-int LTR ERVL 1224 1353 -4408 4 1464 4148 165 61 98 chrX 115303771 115304753 -51345543 + ORR1A4-int LTR MaLR 1015 1960 -3 4 1464 1729 151 81 10 chrX 115304756 115305063 -51345233 + ORR1A4 LTR MaLR 1 329 0 4 1464 2116 246 45 144 chrX 115305485 115306585 -51343711 + L1_Mur3 LINE L1 3881 4872 -1008 4 1464 274 258 0 0 chrX 115306597 115306663 -51343633 + L1_Mur3 LINE L1 4987 5052 -828 4 1464 1513 248 192 6 chrX 115306674 115307222 -51343074 + Lx7 LINE L1 6505 7154 -542 4 1464 21 57 0 0 chrX 115307923 115307958 -51342338 + AT_rich Low_complexity Low_complexity 1 35 0 4 1464 23 54 0 0 chrX 115308350 115308387 -51341909 + AT_rich Low_complexity Low_complexity 1 37 0 4 1464 413 339 26 68 chrX 115308458 115308648 -51341648 - B3A SINE B2 -5 211 30 4 1464 2806 226 19 68 chrX 115308662 115309504 -51340792 - L1_Mur3 LINE L1 -1286 4594 3794 4 1464 727 244 73 15 chrX 115309532 115309614 -51340682 - L1_Mur3 LINE L1 -6529 1199 1102 4 1464 429 20 0 0 chrX 115309614 115309664 -51340632 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1464 727 244 73 15 chrX 115309664 115309855 -51340441 - L1_Mur3 LINE L1 -6627 1101 911 4 1464 284 0 28 0 chrX 115309869 115309905 -51340391 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 4 1464 505 364 26 12 chrX 115309956 115310301 -51339995 - L1_Mur3 LINE L1 -7198 530 181 4 1464 1839 250 38 75 chrX 115310515 115310695 -51339601 - RMER1C Other Other -4 1338 1188 4 1464 1495 6 6 11 chrX 115310695 115310876 -51339420 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 1464 1839 250 38 75 chrX 115310876 115311297 -51338999 - RMER1C Other Other -155 1187 759 4 1464 1705 172 11 165 chrX 115311421 115311881 -51338415 + ORR1B1 LTR MaLR 4 392 -2 4 1464 868 193 0 0 chrX 115313182 115313332 -51336964 + B1_Mur4 SINE Alu 1 150 0 4 1464 26 50 0 0 chrX 115313432 115313472 -51336824 + AT_rich Low_complexity Low_complexity 1 40 0 4 1464 35279 36 0 0 chrX 115313619 115319046 -51331250 + L1Md_T LINE L1 66 5589 -297 4 1464 8984 5 0 0 chrX 115319046 115320042 -51330254 + L1Md_T LINE L1 5590 6585 0 4 1464 387 0 0 0 chrX 115320756 115320799 -51329497 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 1464 1595 184 35 12 chrX 115321121 115321440 -51328856 + ORR1A4 LTR MaLR 3 328 -1 4 1464 268 298 108 45 chrX 115322003 115322376 -51327920 + L1_Rod LINE L1 1170 1583 -4264 4 1464 558 0 0 0 chrX 115322376 115322438 -51327858 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 1464 265 320 110 62 chrX 115322438 115323085 -51327211 + L1_Rod LINE L1 1584 2243 -3604 4 1464 2891 184 157 20 chrX 115323145 115324538 -51325758 + L1VL2 LINE L1 126 1725 -1890 4 1464 718 273 56 36 chrX 115324527 115324831 -51325465 + L1Md_F LINE L1 284 593 -5926 4 1464 16186 140 17 0 chrX 115324828 115325668 -51324628 - L1_Mm LINE L1 -830 5053 4210 4 1464 360 0 0 0 chrX 115325668 115325708 -51324588 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 1464 16186 140 17 0 chrX 115325708 115327583 -51322713 - L1_Mm LINE L1 -1674 4209 2295 4 1464 3234 66 28 9 chrX 115327571 115328032 -51322264 + L1_Mm LINE L1 1847 2316 -3567 4 1464 425 312 58 15 chrX 115328256 115328461 -51321835 - B3 SINE B2 -1 215 2 4 1464 455 288 36 39 chrX 115328926 115329213 -51321083 + L1ME2 LINE L1 5591 5881 -281 4 1464 1181 304 90 10 chrX 115331882 115332608 -51317688 - Lx8 LINE L1 -381 7092 6309 4 1464 24 53 0 0 chrX 115333327 115333365 -51316931 + AT_rich Low_complexity Low_complexity 1 38 0 4 1464 23 0 0 0 chrX 115333787 115333810 -51316486 + AT_rich Low_complexity Low_complexity 1 23 0 4 1464 25 31 0 0 chrX 115334269 115334301 -51315995 + AT_rich Low_complexity Low_complexity 1 32 0 5 1464 959 221 41 14 chrX 115334342 115334562 -51315734 - MTC LTR MaLR 0 421 196 5 1464 970 111 13 7 chrX 115334596 115334750 -51315546 - L1_Mus2 LINE L1 -1 6565 6411 5 1464 753 281 20 0 chrX 115334766 115334965 -51315331 - MTC LTR MaLR -218 203 1 5 1464 435 38 0 0 chrX 115335532 115335585 -51314711 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1464 1276 145 25 2 chrX 115336647 115336897 -51313399 - L1VL2 LINE L1 -2472 3674 3427 5 1464 6407 64 12 5 chrX 115336893 115337742 -51312554 - L1Md_F2 LINE L1 0 6582 5728 5 1464 5626 136 10 18 chrX 115337745 115338759 -51311537 - L1VL2 LINE L1 -525 3389 2384 5 1464 9088 58 3 2 chrX 115338754 115340605 -51309691 - L1Md_F2 LINE L1 0 6582 4729 5 1464 7190 130 23 13 chrX 115340593 115342599 -51307697 - L1VL2 LINE L1 -1521 2393 366 5 1464 516 291 38 27 chrX 115342717 115342901 -51307395 - MER58A DNA MER1_type -30 194 9 5 1464 408 379 0 14 chrX 115343212 115343354 -51306942 + B3 SINE B2 3 142 -74 5 1465 273 98 0 0 chrX 115343367 115343408 -51306888 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1465 486 0 0 0 chrX 115343416 115343470 -51306826 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 1465 791 377 13 31 chrX 115343669 115344050 -51306246 + MTE2b LTR MaLR 1 374 -5 5 1465 244 125 15 15 chrX 115344313 115344378 -51305918 + (TTTG)n Simple_repeat Simple_repeat 2 66 0 5 1465 1245 41 0 0 chrX 115344381 115344528 -51305768 - B1_Mm SINE Alu 0 147 1 5 1465 310 343 122 17 chrX 115346756 115346928 -51303368 - L1MB7 LINE L1 -131 6053 5864 5 1465 5909 199 36 57 chrX 115346974 115348560 -51301736 - Lx5 LINE L1 0 7050 5485 5 1465 471 241 19 0 chrX 115348561 115348669 -51301627 - Lx5 LINE L1 -757 5120 5011 5 1465 4983 125 16 16 chrX 115348677 115350130 -51300166 - L1Md_A LINE L1 -3985 1898 446 5 1465 591 292 51 41 chrX 115350321 115350727 -51299569 - L1M3d LINE L1 -431 5740 5325 5 1465 3682 182 9 6 chrX 115350912 115351598 -51298698 - Lx2 LINE L1 -1 6996 6309 5 1465 9489 149 41 12 chrX 115351600 115352634 -51297662 - L1VL2 LINE L1 -827 2788 1728 5 1465 399 21 0 0 chrX 115352634 115352682 -51297614 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1465 9489 188 51 32 chrX 115352682 115354531 -51295765 - L1VL2 LINE L1 -1888 1727 1 5 1465 621 102 0 0 chrX 115354839 115354947 -51295349 + (TC)n Simple_repeat Simple_repeat 2 109 0 5 1465 367 111 0 0 chrX 115354947 115355001 -51295295 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1465 540 28 64 18 chrX 115355352 115355461 -51294835 + (TC)n Simple_repeat Simple_repeat 1 114 0 5 1465 317 131 16 0 chrX 115355731 115355792 -51294504 + (ATG)n Simple_repeat Simple_repeat 2 63 0 5 1465 230 305 37 0 chrX 115355963 115356045 -51294251 - L1M3d LINE L1 -1447 4693 4609 5 1465 413 298 176 36 chrX 115356049 115356355 -51293941 - L1M3d LINE L1 -1650 4496 4148 5 1465 360 0 0 0 chrX 115356945 115356985 -51293311 + (TAGA)n Simple_repeat Simple_repeat 1 40 0 5 1465 314 319 77 12 chrX 115357094 115357262 -51293034 - L1M3d LINE L1 -4516 1551 1373 5 1465 24 0 0 0 chrX 115357262 115357286 -51293010 + AT_rich Low_complexity Low_complexity 1 24 0 5 1465 288 130 0 0 chrX 115357310 115357356 -51292940 + (GA)n Simple_repeat Simple_repeat 2 47 0 5 1465 271 384 66 33 chrX 115357356 115357507 -51292789 - B3 SINE B2 -60 156 1 5 1465 953 152 397 0 chrX 115357527 115357768 -51292528 - Lx3B LINE L1 -49 6924 6587 5 1465 2246 185 36 8 chrX 115357766 115358261 -51292035 + L1_Mur2 LINE L1 3835 4343 -1534 5 1465 725 175 0 0 chrX 115358253 115358373 -51291923 + Lx4A LINE L1 5845 5964 -1094 5 1465 5833 152 52 2 chrX 115358377 115359392 -51290904 + Lx2 LINE L1 5716 6781 -216 5 1465 2017 222 21 9 chrX 115359387 115359824 -51290472 + Lx4A LINE L1 6468 6909 -149 5 1465 351 0 0 0 chrX 115360044 115360083 -51290213 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 1465 285 233 29 10 chrX 115361445 115361549 -51288747 + (TCTA)n Simple_repeat Simple_repeat 4 109 0 5 1465 25 31 0 0 chrX 115361711 115361743 -51288553 + AT_rich Low_complexity Low_complexity 1 32 0 5 1465 185 0 0 39 chrX 115363507 115363533 -51286763 + (TTA)n Simple_repeat Simple_repeat 3 27 0 5 1465 5353 166 62 16 chrX 115363539 115364584 -51285712 - Lx3B LINE L1 -3 6970 5878 5 1465 332 327 19 24 chrX 115364741 115364806 -51285490 - L1M2 LINE L1 -1080 5063 5001 5 1465 1503 63 0 0 chrX 115364806 115364996 -51285300 - B2_Mm1a SINE B2 -2 191 2 5 1465 332 327 19 24 chrX 115364996 115365143 -51285153 - L1M2 LINE L1 -1143 5000 4852 5 1465 2556 82 6 8 chrX 115365245 115365601 -51284695 - L1Md_F2 LINE L1 -12 6570 6216 5 1465 182 0 0 97 chrX 115365801 115365832 -51284464 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1465 374 322 39 7 chrX 115365938 115366091 -51284205 - B3 SINE B2 0 216 59 5 1465 266 289 23 0 chrX 115366478 115366606 -51283690 + Lx9 LINE L1 7514 7644 0 5 1465 329 355 48 55 chrX 115366609 115366898 -51283398 + L1M2 LINE L1 4178 4464 -1679 5 1465 283 286 75 70 chrX 115366952 115367151 -51283145 - RLTR21 LTR ERVK -307 1265 1066 5 1465 247 307 99 79 chrX 115367117 115367269 -51283027 + RSINE1 SINE B4 5 159 -6 5 1465 541 209 14 35 chrX 115367505 115367649 -51282647 + Lx2 LINE L1 6857 6997 0 5 1465 1598 198 25 67 chrX 115367783 115368140 -51282156 - ORR1C1 LTR MaLR 0 378 37 5 1465 522 350 58 74 chrX 115369360 115369927 -51280369 + Lx8 LINE L1 6101 6658 -815 5 1465 741 294 14 14 chrX 115369940 115370147 -51280149 - Lx7 LINE L1 -803 6893 6687 5 1465 647 321 81 15 chrX 115370134 115370271 -51280025 + L1M4 LINE L1 4200 4343 -1803 5 1465 228 67 0 0 chrX 115370271 115370301 -51279995 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5 1465 647 321 81 15 chrX 115370301 115370845 -51279451 + L1M4 LINE L1 4344 4925 -1221 5 1465 867 325 4 112 chrX 115371054 115371570 -51278726 + Lx7 LINE L1 6874 7333 -363 5 1465 231 197 0 78 chrX 115371592 115371669 -51278627 + T-rich Low_complexity Low_complexity 3 73 0 5 1465 28 48 0 0 chrX 115371759 115371801 -51278495 + AT_rich Low_complexity Low_complexity 1 42 0 5 1465 557 245 11 17 chrX 115371817 115371961 -51278335 + B1_Mur3 SINE Alu 1 146 -1 5 1465 292 250 0 80 chrX 115371969 115372082 -51278214 + L1_Mur3 LINE L1 2959 3062 -2818 5 1465 561 82 0 0 chrX 115372082 115372155 -51278141 + (GAA)n Simple_repeat Simple_repeat 1 73 0 5 1465 951 137 6 11 chrX 115372155 115372332 -51277964 + GA-rich Low_complexity Low_complexity 5 180 0 5 1465 438 242 33 155 chrX 115372346 115372474 -51277822 + L1_Mur3 LINE L1 3070 3176 -2704 5 1465 1232 79 0 11 chrX 115372474 115372653 -51277643 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 5 1465 438 242 33 155 chrX 115372653 115372827 -51277469 + L1_Mur3 LINE L1 3177 3335 -2545 5 1465 1254 159 184 56 chrX 115372924 115373244 -51277052 - L1_Mus2 LINE L1 0 6566 6206 5 1465 1703 164 3 0 chrX 115373232 115373519 -51276777 + L1_Mm LINE L1 5496 5783 -100 5 1465 3700 166 65 12 chrX 115373516 115374252 -51276044 - L1_Mur2 LINE L1 -1038 4839 4065 5 1465 6710 164 13 10 chrX 115374256 115376026 -51274270 + Lx LINE L1 4859 6630 -24 5 1465 965 118 28 0 chrX 115376026 115376170 -51274126 + B1_Mus1 SINE Alu 1 148 0 5 1465 6710 139 9 8 chrX 115376170 115376186 -51274110 + Lx LINE L1 6631 6650 -4 5 1465 275 261 69 42 chrX 115376225 115376369 -51273927 + L1_Mur3 LINE L1 3322 3469 -2411 5 1465 273 125 0 0 chrX 115376383 115376439 -51273857 + (A)n Simple_repeat Simple_repeat 1 56 0 5 1465 1089 239 36 25 chrX 115376442 115376799 -51273497 + L1_Mur3 LINE L1 4982 5342 -538 5 1465 785 217 26 29 chrX 115376801 115377025 -51273271 + ORR1B2 LTR MaLR 3 233 -161 5 1465 24680 167 98 24 chrX 115377046 115378178 -51272118 + L1_Mus3 LINE L1 300 1534 -4349 5 1465 441 0 0 0 chrX 115378178 115378227 -51272069 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 1465 24680 145 37 18 chrX 115378227 115378777 -51271519 + L1_Mus3 LINE L1 1535 2103 -4535 5 1465 625 106 12 0 chrX 115378777 115378862 -51271434 + B1_Mus2 SINE Alu 61 146 -1 5 1465 24680 145 37 18 chrX 115378862 115383232 -51267064 + L1_Mus3 LINE L1 2104 6630 -8 5 1465 904 133 6 12 chrX 115383275 115383442 -51266854 + GA-rich Low_complexity Low_complexity 6 171 0 5 1465 481 242 0 0 chrX 115383447 115383542 -51266754 - B1_Mur2 SINE Alu -48 101 7 5 1465 307 202 12 37 chrX 115383973 115384055 -51266241 - Lx7 LINE L1 -4 7692 7613 5 1465 1000 312 31 6 chrX 115384064 115384418 -51265878 - Lx7 LINE L1 -440 7256 6894 5 1465 2440 139 7 1 chrX 115384422 115384891 -51265405 - Lx2A1 LINE L1 -1136 5872 5460 5 1465 285 319 72 7 chrX 115384902 115385041 -51265255 - Lx7 LINE L1 -1351 6345 6198 5 1465 519 305 62 4 chrX 115385053 115385280 -51265016 - Lx7 LINE L1 -1557 6139 5900 5 1465 351 120 62 73 chrX 115385285 115385464 -51264832 + (TTATA)n Simple_repeat Simple_repeat 4 180 0 5 1465 1049 170 31 27 chrX 115385559 115385783 -51264513 - L1_Mus3 LINE L1 -5 6633 6409 5 1465 30 0 0 0 chrX 115385821 115385851 -51264445 + AT_rich Low_complexity Low_complexity 1 30 0 5 1465 350 338 46 54 chrX 115386256 115386807 -51263489 + ERVL-B4-int LTR ERVL 2247 2786 -2928 5 1465 7786 51 14 3 chrX 115386807 115387791 -51262505 + L1Md_F2 LINE L1 5588 6582 0 5 1465 337 355 54 63 chrX 115387791 115387871 -51262425 + ERVL-B4-int LTR ERVL 2787 2871 -2843 5 1465 387 138 0 0 chrX 115388061 115388126 -51262170 + B1_Mm SINE Alu 62 126 -21 5 1465 516 316 67 13 chrX 115388392 115388776 -51261520 + RMER6-int LTR ERVK 532 1126 -2051 5 1465 279 0 0 0 chrX 115388790 115388821 -51261475 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1465 369 0 0 0 chrX 115388821 115388861 -51261435 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 1465 913 139 0 0 chrX 115388861 115388998 -51261298 - B1_Mm SINE Alu -10 137 1 5 1465 698 95 26 0 chrX 115389268 115389384 -51260912 - L1_Mm LINE L1 -4083 1800 1682 5 1465 364 273 142 7 chrX 115389638 115389793 -51260503 + MT2B LTR ERVL 31 206 -395 5 1465 3659 190 50 102 chrX 115389765 115390697 -51259599 + ORR1A3-int LTR MaLR 1063 1946 -17 5 1465 1034 225 32 21 chrX 115390697 115390979 -51259317 + MYSERV-int LTR ERVK 6266 6550 0 5 1465 385 289 52 78 chrX 115390991 115391299 -51258997 + RLTR15 LTR ERVK 14 313 -46 5 1465 1341 256 110 12 chrX 115391363 115391413 -51258883 + Lx6 LINE L1 6114 6183 -1277 5 1465 228 43 65 0 chrX 115391413 115391459 -51258837 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 1465 1341 256 110 12 chrX 115391459 115391807 -51258489 + Lx6 LINE L1 6184 6551 -909 5 1465 342 286 96 77 chrX 115391885 115392093 -51258203 + ERVL-B4-int LTR ERVL 4396 4607 -1107 5 1465 811 332 63 8 chrX 115392159 115392523 -51257773 + ERVL-B4-int LTR ERVL 4735 5118 -596 5 1465 303 280 37 79 chrX 115392596 115392786 -51257510 + L1M2 LINE L1 5201 5382 -761 5 1465 474 265 126 35 chrX 115392882 115393167 -51257129 + L1M4 LINE L1 5407 5717 -467 5 1465 314 281 150 12 chrX 115393250 115393423 -51256873 + L1M4 LINE L1 4980 5176 -970 5 1465 430 323 15 30 chrX 115393487 115393618 -51256678 + RSINE1 SINE B4 1 129 -36 5 1465 324 0 0 0 chrX 115393629 115393665 -51256631 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1465 564 333 19 13 chrX 115393674 115393829 -51256467 - B4A SINE B4 -135 157 2 5 1465 933 27 0 0 chrX 115393837 115393949 -51256347 + (TTTC)n Simple_repeat Simple_repeat 2 113 0 5 1465 24 0 0 0 chrX 115394483 115394507 -51255789 + AT_rich Low_complexity Low_complexity 1 24 0 5 1465 279 333 8 30 chrX 115394515 115394648 -51255648 + B1_Mur4 SINE Alu 1 130 -20 6 1465 251 352 53 32 chrX 115394713 115394807 -51255489 + RSINE1 SINE B4 42 137 -28 6 1465 3555 52 0 0 chrX 115394833 115395277 -51255019 + L1Md_F2 LINE L1 6122 6565 -17 6 1465 223 130 51 13 chrX 115395302 115395380 -51254916 + (TA)n Simple_repeat Simple_repeat 2 82 0 6 1465 263 219 100 45 chrX 115395418 115395528 -51254768 + MER63C DNA AcHobo 566 681 -249 6 1465 424 374 15 0 chrX 115395520 115395651 -51254645 - ID_B1 SINE B4 -1 223 91 6 1465 4721 161 81 23 chrX 115396174 115397145 -51253151 - RLTR25B LTR ERVK 0 1028 1 6 1465 347 288 169 6 chrX 115397466 115397644 -51252652 + B3 SINE B2 4 210 -6 6 1465 216 0 0 0 chrX 115398397 115398421 -51251875 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1465 388 347 31 5 chrX 115398718 115398909 -51251387 - B3 SINE B2 -19 197 2 6 1465 231 103 0 0 chrX 115398928 115398967 -51251329 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1465 21448 86 6 8 chrX 115399132 115401911 -51248385 - L1Md_F2 LINE L1 -2 6580 3797 6 1465 378 0 0 0 chrX 115401911 115401953 -51248343 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1465 21448 96 5 12 chrX 115401953 115402997 -51247299 - L1Md_F2 LINE L1 -2087 3796 2779 6 1465 29496 36 0 1 chrX 115402983 115406604 -51243692 + L1Md_T LINE L1 1968 5585 -298 6 1465 8176 45 0 0 chrX 115406605 115407601 -51242695 + L1Md_T LINE L1 5587 6582 0 6 1465 9730 108 1 1 chrX 115407601 115409070 -51241226 - L1Md_F2 LINE L1 -3095 2788 1321 6 1465 321 24 0 0 chrX 115409070 115409112 -51241184 + RLTR10B LTR ERVK 1 42 -250 6 1465 1950 42 0 121 chrX 115409120 115409443 -51240853 + RLTR10B LTR ERVK 9 292 0 6 1465 4643 138 37 11 chrX 115409447 115410384 -51239912 - L1Md_F2 LINE L1 -5311 1327 371 6 1465 504 0 0 0 chrX 115410609 115410665 -51239631 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1465 1783 196 144 39 chrX 115410792 115411086 -51239210 - RMER6A LTR ERVK -2 688 304 6 1465 972 33 0 0 chrX 115411086 115411206 -51239090 + (TC)n Simple_repeat Simple_repeat 1 120 0 6 1465 1783 194 36 45 chrX 115411206 115411496 -51238800 - RMER6A LTR ERVK -383 307 24 6 1465 334 333 18 9 chrX 115411700 115411806 -51238490 - MTD LTR MaLR -177 242 136 6 1465 1226 298 104 8 chrX 115411806 115412199 -51238097 - RLTR33 LTR ERVK 0 678 248 6 1465 331 286 28 70 chrX 115412255 115412398 -51237898 - MTD LTR MaLR -280 139 3 6 1465 339 242 11 42 chrX 115413212 115413307 -51236989 - ID_B1 SINE B4 0 224 133 6 1465 505 242 186 6 chrX 115413707 115413890 -51236406 - B3 SINE B2 0 216 1 6 1465 926 264 147 12 chrX 115414145 115414383 -51235913 - MTD LTR MaLR -41 378 114 6 1465 903 19 0 0 chrX 115414383 115414488 -51235808 + (GAA)n Simple_repeat Simple_repeat 2 106 0 6 1465 926 264 147 12 chrX 115414488 115414582 -51235714 - MTD LTR MaLR -306 113 2 6 1465 418 283 221 32 chrX 115414806 115414996 -51235300 + URR1A DNA MER1_type 1 226 0 6 1465 3234 206 29 3 chrX 115415063 115415761 -51234535 + RMER6D LTR ERVK 1 716 -4 6 1465 324 311 0 0 chrX 115416620 115416710 -51233586 + Lx7 LINE L1 7209 7298 -398 6 1465 1754 221 15 48 chrX 115416772 115417172 -51233124 + ORR1B1 LTR MaLR 1 387 -7 6 1465 249 211 0 0 chrX 115417200 115417257 -51233039 + T-rich Low_complexity Low_complexity 1 57 0 6 1465 1581 316 62 40 chrX 115417257 115418143 -51232153 + ORR1B1-int LTR MaLR 50 955 -1008 6 1465 227 31 31 0 chrX 115418162 115418194 -51232102 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 6 1465 7937 43 1 5 chrX 115419791 115420771 -51229525 - L1Md_F2 LINE L1 -10 6572 5597 6 1465 8245 157 9 9 chrX 115420996 115422387 -51227909 - Lx3A LINE L1 -5 6976 5587 6 1465 555 328 64 53 chrX 115422408 115422768 -51227528 + MMERGLN-int LTR ERV1 2074 2448 -5108 6 1465 356 320 70 52 chrX 115422766 115423072 -51227224 + MMERGLN-int LTR ERV1 3878 4278 -3323 6 1465 953 68 15 0 chrX 115423072 115423205 -51227091 + (GAAA)n Simple_repeat Simple_repeat 3 137 0 6 1465 322 345 125 33 chrX 115423205 115423334 -51226962 + MMERGLN-int LTR ERV1 4279 4430 -3171 6 1465 1581 311 54 13 chrX 115423704 115424498 -51225798 + MuRRS4-int LTR ERV1 3536 4015 -1048 6 1465 187 310 69 0 chrX 115425057 115425115 -51225181 + MIRc SINE MIR 20 81 -187 6 1465 2168 118 126 0 chrX 115425346 115425744 -51224552 + RLTR47_MM LTR ERV1 2 449 -83 6 1465 24 0 0 0 chrX 115425744 115425768 -51224528 + AT_rich Low_complexity Low_complexity 1 24 0 6 1465 23 33 0 0 chrX 115426108 115426138 -51224158 + AT_rich Low_complexity Low_complexity 1 30 0 6 1465 21 0 0 0 chrX 115426387 115426408 -51223888 + AT_rich Low_complexity Low_complexity 1 21 0 6 1465 25 31 0 0 chrX 115426903 115426935 -51223361 + AT_rich Low_complexity Low_complexity 1 32 0 6 1465 315 0 0 0 chrX 115426966 115427001 -51223295 + (TA)n Simple_repeat Simple_repeat 2 36 0 6 1465 447 19 0 0 chrX 115427001 115427052 -51223244 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1465 832 346 15 6 chrX 115427578 115427918 -51222378 - RMER5 LTR ERV1 -4 530 188 6 1465 384 152 97 119 chrX 115427917 115428051 -51222245 - RLTR21 LTR ERVK -574 998 868 6 1465 247 217 67 0 chrX 115428148 115428208 -51222088 - RMER5 LTR ERV1 -469 65 2 6 1465 1476 90 14 0 chrX 115428209 115428431 -51221865 + L1_Mus3 LINE L1 6413 6637 -1 6 1465 337 322 0 0 chrX 115428981 115429096 -51221200 - L1M2 LINE L1 -1975 4168 4054 6 1465 1284 243 57 9 chrX 115429199 115429515 -51220781 - RMER5 LTR ERV1 0 534 204 6 1465 313 41 0 0 chrX 115429625 115429674 -51220622 - Lx2 LINE L1 0 6997 6949 6 1465 438 265 139 0 chrX 115429691 115429842 -51220454 - RMER5 LTR ERV1 -358 176 5 6 1465 669 297 118 27 chrX 115429854 115430228 -51220068 - L1M5 LINE L1 -2194 3952 3545 6 1465 534 129 0 0 chrX 115430362 115430447 -51219849 + (TA)n Simple_repeat Simple_repeat 1 85 0 6 1465 492 152 0 0 chrX 115431782 115431881 -51218415 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 6 1465 329 375 62 12 chrX 115432024 115432267 -51218029 + ERVL-int LTR ERVL 2758 3012 -2702 6 1465 838 346 0 5 chrX 115432305 115432514 -51217782 + B3 SINE B2 1 208 -8 6 1465 286 344 54 51 chrX 115432825 115433101 -51217195 + ERVL-int LTR ERVL 3315 3591 -2076 6 1465 345 339 9 0 chrX 115433233 115433348 -51216948 + ERVL-int LTR ERVL 4270 4385 -1372 6 1465 655 268 82 39 chrX 115433362 115433442 -51216854 - B3 SINE B2 0 216 132 6 1465 1881 171 55 61 chrX 115433442 115433898 -51216398 - RLTR11B LTR ERVK 0 453 1 6 1465 655 268 82 39 chrX 115433898 115434023 -51216273 - B3 SINE B2 -85 131 2 6 1465 417 327 63 38 chrX 115434023 115434277 -51216019 + ERVL-int LTR ERVL 4439 4714 -1047 6 1465 816 272 131 0 chrX 115434611 115434983 -51215313 - Lx6 LINE L1 -93 7367 6947 6 1465 491 324 37 26 chrX 115435010 115435200 -51215096 - B3A SINE B2 -5 193 2 6 1465 185 400 67 0 chrX 115435357 115435507 -51214789 + L2 LINE L2 1977 2136 -1283 6 1465 190 330 108 43 chrX 115435574 115435805 -51214491 + L2 LINE L2 2236 2481 -938 6 1465 24 53 0 0 chrX 115435965 115436003 -51214293 + AT_rich Low_complexity Low_complexity 1 38 0 6 1465 219 333 110 55 chrX 115436326 115436472 -51213824 + MER5A DNA MER1_type 34 187 -2 6 1465 595 67 11 11 chrX 115436669 115436759 -51213537 + (TA)n Simple_repeat Simple_repeat 2 91 0 6 1465 583 295 160 27 chrX 115436888 115437226 -51213070 - MTD LTR MaLR 0 419 37 6 1465 589 293 11 11 chrX 115437251 115437441 -51212855 - L1MA6 LINE L1 -464 5836 5647 6 1465 822 284 98 37 chrX 115437469 115438311 -51211985 - L1M2 LINE L1 -790 5510 4613 6 1465 522 257 113 36 chrX 115438527 115438721 -51211575 - B3 SINE B2 -3 213 5 6 1465 29 28 0 0 chrX 115439154 115439190 -51211106 + AT_rich Low_complexity Low_complexity 1 36 0 6 1465 867 269 32 5 chrX 115439209 115439429 -51210867 - Lx6 LINE L1 -55 7405 7180 6 1465 837 268 48 32 chrX 115439496 115439747 -51210549 - ORR1C2 LTR MaLR 0 384 130 6 1465 504 120 303 0 chrX 115439747 115439869 -51210427 + L1_Mus2 LINE L1 6416 6577 -5 6 1465 344 221 39 111 chrX 115439869 115440022 -51210274 - ORR1C2 LTR MaLR -232 142 1 6 1465 303 341 10 52 chrX 115440753 115440945 -51209351 - L1M3 LINE L1 -689 5479 5296 6 1465 278 335 77 57 chrX 115440934 115441143 -51209153 + L1MA5 LINE L1 5829 6041 -259 6 1465 28 48 0 0 chrX 115441197 115441239 -51209057 + AT_rich Low_complexity Low_complexity 1 42 0 6 1465 227 375 111 44 chrX 115441436 115441824 -51208472 + L2 LINE L2 2668 3081 -338 6 1465 23 0 0 0 chrX 115442599 115442622 -51207674 + AT_rich Low_complexity Low_complexity 1 23 0 6 1465 204 125 0 0 chrX 115443198 115443230 -51207066 + (TTA)n Simple_repeat Simple_repeat 1 32 0 6 1465 5260 140 8 5 chrX 115443230 115444078 -51206218 - Lx3A LINE L1 -10 6971 6121 6 1465 371 329 30 6 chrX 115444079 115444244 -51206052 + Lx8 LINE L1 6364 6532 -941 6 1465 21 36 0 0 chrX 115444411 115444439 -51205857 + AT_rich Low_complexity Low_complexity 1 28 0 6 1465 3122 29 0 23 chrX 115444471 115444859 -51205437 - L1Md_F2 LINE L1 -1 6581 6203 6 1465 2318 126 0 25 chrX 115444859 115445225 -51205071 + L1Md_F LINE L1 72 428 -6091 6 1465 5156 25 0 0 chrX 115445231 115445830 -51204466 - L1Md_A LINE L1 -1 6581 5983 6 1465 1053 313 45 21 chrX 115446239 115446615 -51203681 + Lx6 LINE L1 7050 7434 -26 6 1465 1077 129 28 6 chrX 115447303 115447482 -51202814 + B2_Mm1t SINE B2 11 193 0 6 1465 424 265 173 73 chrX 115447493 115447741 -51202555 + RLTR9A LTR ERVK 1 273 -95 6 1465 26 93 0 0 chrX 115447997 115448072 -51202224 + AT_rich Low_complexity Low_complexity 1 75 0 6 1465 4561 151 11 3 chrX 115449397 115449994 -51200302 - Lx3A LINE L1 -6 6975 6380 6 1465 347 0 23 0 chrX 115449994 115450037 -51200259 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 6 1465 4561 151 11 3 chrX 115450037 115450190 -51200106 - Lx3A LINE L1 -602 6379 6220 6 1465 6202 131 39 3 chrX 115450190 115450564 -51199732 - L1_Mur1 LINE L1 -845 5041 4650 6 1465 186 43 0 0 chrX 115450564 115450587 -51199709 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 6 1465 6202 131 39 3 chrX 115450587 115451282 -51199014 - L1_Mur1 LINE L1 -1237 4649 3935 6 1465 408 214 43 0 chrX 115452393 115452510 -51197786 + Lx9 LINE L1 7516 7637 -7 6 1465 441 0 0 0 chrX 115452851 115452900 -51197396 + (TA)n Simple_repeat Simple_repeat 2 50 0 6 1465 441 95 0 0 chrX 115452970 115453033 -51197263 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 1465 25 51 0 0 chrX 115453342 115453381 -51196915 + AT_rich Low_complexity Low_complexity 1 39 0 6 1465 275 274 55 0 chrX 115453578 115453651 -51196645 + ID4_ SINE ID 3 79 -4 6 1465 21 0 0 0 chrX 115454252 115454273 -51196023 + AT_rich Low_complexity Low_complexity 1 21 0 6 1465 940 142 153 0 chrX 115454412 115454595 -51195701 - L1_Mur2 LINE L1 -237 5640 5430 6 1465 5855 106 5 11 chrX 115454595 115455483 -51194813 - L1_Mus3 LINE L1 -2 6636 5755 6 1465 6003 157 3 14 chrX 115455483 115456556 -51193740 + L1_Mm LINE L1 3325 4387 -1496 6 1465 248 103 0 0 chrX 115456554 115456593 -51193703 + L1_Mur2 LINE L1 2883 2921 -2956 7 1465 939 135 6 0 chrX 115456593 115456749 -51193547 - L1_Mur2 LINE L1 -1249 4628 4472 6 1465 2197 170 11 14 chrX 115456744 115457185 -51193111 - L1_Mur2 LINE L1 -3001 2876 2437 6 1465 269 322 58 0 chrX 115457185 115457272 -51193024 - B1F SINE Alu -21 128 37 7 1465 297 0 0 0 chrX 115457287 115457320 -51192976 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 1465 1257 89 5 16 chrX 115457330 115457523 -51192773 - L1Md_F2 LINE L1 -10 6572 6382 7 1465 12647 65 1 1 chrX 115457523 115459910 -51190386 - L1Md_F2 LINE L1 -6 6576 4188 7 1465 425 356 96 0 chrX 115460252 115460398 -51189898 - B3A SINE B2 -30 168 9 7 1465 21 82 0 0 chrX 115460547 115460596 -51189700 + AT_rich Low_complexity Low_complexity 1 49 0 7 1465 318 50 0 0 chrX 115460619 115460659 -51189637 + (TTCA)n Simple_repeat Simple_repeat 3 42 0 7 1465 564 218 58 36 chrX 115460659 115460797 -51189499 - B1_Mus2 SINE Alu -2 145 5 7 1465 370 315 9 9 chrX 115461157 115461269 -51189027 - RSINE1 SINE B4 -53 112 1 7 1465 207 0 0 0 chrX 115461416 115461439 -51188857 + (CAA)n Simple_repeat Simple_repeat 2 24 0 7 1465 25 31 0 0 chrX 115461904 115461936 -51188360 + AT_rich Low_complexity Low_complexity 1 32 0 7 1465 485 15 44 0 chrX 115462052 115462120 -51188176 - L1Md_F2 LINE L1 -2 6580 6510 7 1465 195 42 0 0 chrX 115462395 115462419 -51187877 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 1465 275 256 8 0 chrX 115462437 115462554 -51187742 + (TA)n Simple_repeat Simple_repeat 2 119 0 7 1465 284 303 19 39 chrX 115462603 115462706 -51187590 - Lx8 LINE L1 -775 6698 6598 7 1465 7796 38 1 0 chrX 115462785 115463716 -51186580 + L1Md_T LINE L1 5650 6581 -1 7 1465 16014 125 18 6 chrX 115463717 115463801 -51186495 - L1Md_F LINE L1 -1956 3927 3840 7 1465 399 31 46 0 chrX 115463801 115463866 -51186430 + (GTTTG)n Simple_repeat Simple_repeat 2 69 0 7 1465 16014 125 18 6 chrX 115463866 115466123 -51184173 - L1Md_F LINE L1 -2044 3839 1578 7 1465 534 31 0 0 chrX 115466123 115466187 -51184109 + (TC)n Simple_repeat Simple_repeat 1 64 0 7 1465 16014 200 76 56 chrX 115466187 115467494 -51182802 - L1Md_F LINE L1 -4306 1577 242 7 1465 376 252 0 72 chrX 115467504 115467615 -51182681 - RLTR20D LTR ERVK -465 103 1 7 1465 1735 163 3 0 chrX 115467637 115467926 -51182370 + ORR1A2 LTR MaLR 1 290 -37 7 1465 244 263 0 13 chrX 115468283 115468360 -51181936 + L1MD3 LINE L1 7757 7832 -163 7 1465 889 256 56 130 chrX 115468411 115468910 -51181386 + RLTR12B LTR ERVK 41 502 -26 7 1465 2291 52 0 3 chrX 115469060 115469351 -51180945 - ORR1A0 LTR MaLR 0 346 57 7 1465 21 36 0 0 chrX 115469380 115469408 -51180888 + AT_rich Low_complexity Low_complexity 1 28 0 7 1465 23 0 0 0 chrX 115469435 115469458 -51180838 + AT_rich Low_complexity Low_complexity 1 23 0 7 1465 29 28 0 0 chrX 115470046 115470082 -51180214 + AT_rich Low_complexity Low_complexity 1 36 0 7 1465 22 0 0 0 chrX 115470227 115470249 -51180047 + AT_rich Low_complexity Low_complexity 1 22 0 7 1465 214 299 88 66 chrX 115470336 115470472 -51179824 - MIRb SINE MIR -110 158 20 7 1465 662 285 63 13 chrX 115470556 115470794 -51179502 - MLT1K LTR MaLR -5 590 341 7 1465 24 32 0 0 chrX 115470907 115470938 -51179358 + AT_rich Low_complexity Low_complexity 1 31 0 7 1465 659 363 58 31 chrX 115471154 115471637 -51178659 - Lx8 LINE L1 -265 7208 6713 7 1465 183 80 0 0 chrX 115471637 115471662 -51178634 + (T)n Simple_repeat Simple_repeat 1 25 0 7 1465 1143 61 0 26 chrX 115471662 115471813 -51178483 - B1_Mm SINE Alu 0 147 1 7 1465 198 0 0 0 chrX 115471933 115471955 -51178341 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 7 1465 180 27 53 26 chrX 115471969 115472007 -51178289 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 7 1465 271 326 77 56 chrX 115472010 115472107 -51178189 - Lx8 LINE L1 -845 6628 6539 7 1465 1614 242 49 17 chrX 115472107 115472515 -51177781 + MTC LTR MaLR 1 421 0 7 1465 271 326 77 56 chrX 115472515 115472612 -51177684 - Lx8 LINE L1 -935 6538 6430 7 1465 1290 322 93 46 chrX 115472676 115473304 -51176992 - Lx8 LINE L1 -3 7470 6819 7 1465 333 0 0 0 chrX 115473304 115473341 -51176955 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 7 1465 1290 322 93 46 chrX 115473341 115473576 -51176720 - Lx8 LINE L1 -655 6818 6567 7 1465 228 259 82 0 chrX 115473572 115473657 -51176639 - Lx8 LINE L1 -1073 6400 6309 7 1465 1006 81 74 7 chrX 115473692 115473841 -51176455 - L1_Mus1 LINE L1 0 6567 6409 7 1465 36 62 0 0 chrX 115473940 115474004 -51176292 + AT_rich Low_complexity Low_complexity 1 64 0 7 1465 1034 265 132 35 chrX 115474205 115474247 -51176049 - ORR1C1 LTR MaLR -1 377 334 7 183 4214 166 15 8 chrX 115474247 115474989 -51175307 - Lx LINE L1 -3 6651 5905 7 1466 1034 265 132 35 chrX 115474989 115475286 -51175010 - ORR1C1 LTR MaLR -45 333 5 7 1466 35 24 0 0 chrX 115476007 115476049 -51174247 + AT_rich Low_complexity Low_complexity 1 42 0 7 1466 25 83 0 0 chrX 115476117 115476177 -51174119 + AT_rich Low_complexity Low_complexity 1 60 0 7 1466 1844 202 16 19 chrX 115476431 115476695 -51173601 + Lx2B LINE L1 6610 6869 -131 7 1466 261 0 0 0 chrX 115476695 115476724 -51173572 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 1466 1844 202 16 19 chrX 115476724 115476827 -51173469 + Lx2B LINE L1 6870 6976 -24 7 1466 219 69 0 0 chrX 115476827 115476856 -51173440 + (ATG)n Simple_repeat Simple_repeat 2 30 0 7 1466 1817 193 154 8 chrX 115476862 115477388 -51172908 + Lx9 LINE L1 7040 7643 -1 7 1466 326 330 143 36 chrX 115477410 115477718 -51172578 - L1MB8 LINE L1 -2 6176 5836 7 1466 10758 141 14 11 chrX 115478124 115480812 -51169484 + L1VL2 LINE L1 88 2786 -829 7 1466 1776 195 40 3 chrX 115480802 115480865 -51169431 + Lx LINE L1 3784 3847 -2036 7 1466 405 0 0 0 chrX 115480865 115480910 -51169386 + (CAAAA)n Simple_repeat Simple_repeat 3 47 0 7 1466 1776 195 40 3 chrX 115480910 115481226 -51169070 + Lx LINE L1 3848 4175 -1708 7 1466 6079 162 40 5 chrX 115481227 115482769 -51167527 + Lx LINE L1 5056 6654 0 7 1466 236 303 13 26 chrX 115482771 115482849 -51167447 - MLT1A0 LTR MaLR -59 306 230 7 1466 6251 128 25 0 chrX 115482900 115483935 -51166361 - L1_Mm LINE L1 -2046 3837 2777 7 1466 6589 118 21 12 chrX 115483937 115485742 -51164554 + L1_Mus2 LINE L1 4757 6566 0 7 1466 1036 119 0 0 chrX 115485767 115485910 -51164386 + B1_Mus1 SINE Alu 2 144 -4 7 1466 201 39 0 0 chrX 115485920 115485946 -51164350 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 1466 468 0 0 0 chrX 115486173 115486225 -51164071 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 1466 1120 353 29 21 chrX 115486545 115487069 -51163227 - Lx8 LINE L1 -750 6723 6196 7 1466 255 337 29 39 chrX 115487107 115487314 -51162982 + L1MB3 LINE L1 5975 6179 -4 7 1466 36 0 0 0 chrX 115487579 115487615 -51162681 + AT_rich Low_complexity Low_complexity 1 36 0 7 1466 2384 307 80 28 chrX 115487784 115488813 -51161483 - Lx9 LINE L1 -206 7438 6357 7 1466 391 330 29 89 chrX 115488843 115489180 -51161116 + RMER20A LTR ERVK 2 370 -146 7 1466 225 326 10 10 chrX 115489260 115489356 -51160940 + L1VL4 LINE L1 148 243 -6059 7 1466 16302 165 55 92 chrX 115489353 115491031 -51159265 + L1_Mm LINE L1 1483 3273 -2610 7 1466 3331 30 8 0 chrX 115491031 115491424 -51158872 + MTA_Mm LTR MaLR 1 396 0 7 1466 16302 165 55 92 chrX 115491424 115493046 -51157250 + L1_Mm LINE L1 3274 4634 -1249 7 1466 180 0 0 0 chrX 115493046 115493066 -51157230 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7 1466 16302 165 55 92 chrX 115493066 115493640 -51156656 + L1_Mm LINE L1 4635 5213 -670 7 1466 5165 221 17 40 chrX 115493678 115495110 -51155186 - L1_Mur2 LINE L1 -1299 4578 3180 7 1466 362 285 194 4 chrX 115495732 115495896 -51154400 - B3A SINE B2 -1 215 26 7 1466 1105 90 48 6 chrX 115495904 115496071 -51154225 + B2_Mm2 SINE B2 14 187 -8 7 1466 200 0 100 0 chrX 115496957 115496997 -51153299 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 7 1466 227 309 0 0 chrX 115497202 115497257 -51153039 + Arthur1C DNA Tip100 4 58 -305 7 1466 430 312 35 28 chrX 115497512 115497657 -51152639 + ORR1E LTR MaLR 46 191 -168 7 1466 38 22 0 0 chrX 115497657 115497702 -51152594 + AT_rich Low_complexity Low_complexity 1 45 0 7 1466 420 207 193 41 chrX 115497702 115497873 -51152423 - Lx7 LINE L1 0 7696 7500 7 1466 1083 174 0 29 chrX 115497889 115498096 -51152200 + RLTR22_Mur LTR ERVK 1 201 -1647 7 1466 2038 168 5 8 chrX 115498109 115498481 -51151815 - L1_Mus4 LINE L1 -7 6629 6259 7 1466 2202 120 12 0 chrX 115498486 115498827 -51151469 + Lx LINE L1 5711 6055 -599 7 1466 243 318 11 0 chrX 115499074 115499162 -51151134 - Lx7 LINE L1 -356 7340 7252 7 1466 238 191 0 0 chrX 115499166 115499213 -51151083 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 7 1466 404 247 0 40 chrX 115499214 115499315 -51150981 - Lx7 LINE L1 -455 7241 7145 7 1466 412 322 10 76 chrX 115499317 115499515 -51150781 + ORR1E LTR MaLR 195 379 0 7 1466 309 357 93 52 chrX 115500885 115500986 -51149310 - B4A SINE B4 -8 284 172 1 1466 4763 125 13 63 chrX 115500986 115501831 -51148465 - RLTR13B4 LTR ERVK 0 803 1 2 1466 309 357 93 52 chrX 115501831 115501998 -51148298 - B4A SINE B4 -121 171 5 1 1466 372 365 64 101 chrX 115502002 115502377 -51147919 - MER74C LTR ERVL 0 460 100 3 1466 1761 112 8 0 chrX 115503266 115503525 -51146771 - L1_Mus2 LINE L1 0 6566 6306 4 1466 38581 50 22 16 chrX 115504003 115510409 -51139887 - L1Md_A LINE L1 0 6582 133 5 1466 1909 134 36 0 chrX 115511082 115511387 -51138909 - Lx2 LINE L1 0 6997 6682 6 1466 1142 68 7 0 chrX 115511464 115511611 -51138685 + B1_Mus1 SINE Alu 1 148 0 7 1466 270 148 0 0 chrX 115511611 115511665 -51138631 + (A)n Simple_repeat Simple_repeat 1 54 0 8 1466 531 332 99 3 chrX 115511973 115512249 -51138047 + L1M2 LINE L1 2136 2441 -3702 9 1466 189 0 0 0 chrX 115512249 115512270 -51138026 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 1466 531 332 99 3 chrX 115512270 115512568 -51137728 + L1M2 LINE L1 2442 2765 -3378 9 1466 204 40 0 0 chrX 115512871 115512896 -51137400 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1466 3203 291 88 35 chrX 115514151 115515537 -51134759 + Lx6 LINE L1 5971 7696 0 1 1466 43 94 0 0 chrX 115515783 115515910 -51134386 + AT_rich Low_complexity Low_complexity 1 127 0 1 1466 470 264 15 8 chrX 115515921 115516051 -51134245 + RLTR40 LTR ERVK 583 713 -104 1 1466 751 240 116 118 chrX 115516100 115516567 -51133729 + RLTR40 LTR ERVK 339 804 -13 1 1466 323 314 37 37 chrX 115517055 115517164 -51133132 - B3 SINE B2 -102 114 6 1 1466 1963 228 5 3 chrX 115517735 115518122 -51132174 + MTC LTR MaLR 30 417 -4 1 1466 233 183 100 0 chrX 115518123 115518183 -51132113 + MTC-int LTR MaLR 1 66 -1514 1 1466 9695 120 23 19 chrX 115518194 115520125 -51130171 - Lx3_Mus LINE L1 -774 6235 4297 1 1466 2934 18 3 0 chrX 115520125 115520461 -51129835 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 1466 56093 22 7 6 chrX 115520461 115526928 -51123368 - IAPEz-int LTR ERVK 0 6481 8 1 1466 2924 21 3 0 chrX 115526928 115527264 -51123032 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 1466 16114 133 16 32 chrX 115527265 115530172 -51120124 - Lx3_Mus LINE L1 -1585 4301 1442 1 1466 550 211 48 27 chrX 115530172 115530318 -51119978 + B2_Mm2 SINE B2 38 186 -9 2 1466 9420 93 17 35 chrX 115530325 115531226 -51119070 + L1Md_F2 LINE L1 4480 5392 -491 2 1466 227 31 0 30 chrX 115531226 115531259 -51119037 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 2 1466 9420 93 8 17 chrX 115531259 115532386 -51117910 + L1Md_F2 LINE L1 5393 6482 -100 2 1466 16405 64 2 1 chrX 115532374 115534510 -51115786 + L1Md_F3 LINE L1 3447 5586 -297 2 1466 7936 49 5 1 chrX 115534510 115535490 -51114806 + L1Md_F3 LINE L1 5587 6570 -14 2 1466 500 131 0 18 chrX 115535493 115535602 -51114694 + L1Md_F2 LINE L1 6476 6582 0 2 1466 802 213 152 80 chrX 115535923 115536199 -51114097 + Lx4B LINE L1 6521 6816 -242 2 1466 273 231 143 0 chrX 115536189 115536313 -51113983 - Lx3_Mus LINE L1 -6129 855 634 1 1466 445 98 0 0 chrX 115536331 115536392 -51113904 + Lx4B LINE L1 6832 6892 -166 2 1466 26 64 0 0 chrX 115537396 115537443 -51112853 + AT_rich Low_complexity Low_complexity 1 47 0 2 1466 225 94 0 0 chrX 115537595 115537627 -51112669 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 2 1466 573 15 0 0 chrX 115539328 115539394 -51110902 + (TC)n Simple_repeat Simple_repeat 1 66 0 2 1466 432 37 0 0 chrX 115539394 115539447 -51110849 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1466 318 253 35 24 chrX 115539601 115539686 -51110610 - RLTR17 LTR ERVK -66 626 541 3 1466 611 277 145 19 chrX 115539657 115539900 -51110396 - RLTR17 LTR ERVK -228 464 245 3 1466 460 225 1 6 chrX 115540310 115540403 -51109893 + RSINE1 SINE B4 6 97 -68 3 1466 342 45 0 0 chrX 115540459 115540503 -51109793 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1466 6763 105 5 11 chrX 115543100 115544172 -51106124 - L1_Mus2 LINE L1 0 6566 5503 3 1466 21108 161 28 28 chrX 115544168 115548766 -51101530 - L1_Mus2 LINE L1 -1032 4851 280 3 1466 243 303 55 12 chrX 115548970 115549167 -51101129 - L1M4 LINE L1 -2596 3550 3328 3 1466 348 156 15 45 chrX 115549174 115549241 -51101055 + RMER6C LTR ERVK 41 105 -585 3 1466 5436 42 0 0 chrX 115549256 115549915 -51100381 - L1Md_T LINE L1 0 6582 5924 3 1466 2289 12 0 0 chrX 115549917 115550175 -51100121 + L1Md_T LINE L1 5650 5907 -675 3 1466 1847 207 78 79 chrX 115550175 115550742 -51099554 + RMER6C LTR ERVK 125 690 0 3 1466 348 282 67 7 chrX 115550756 115550906 -51099390 - L1_Mur3 LINE L1 -2577 3303 3145 3 1466 906 293 57 34 chrX 115550906 115551382 -51098914 + RMER2 LTR ERV1 1 563 -4 3 1466 226 279 21 28 chrX 115551388 115551532 -51098764 - L1M4 LINE L1 -2960 3180 3038 3 1466 3117 213 94 40 chrX 115551646 115552488 -51097808 + RLTR25A LTR ERVK 125 1011 -92 3 1466 489 333 27 37 chrX 115552489 115552788 -51097508 - Lx7 LINE L1 -1787 5909 5614 4 1466 3060 75 12 0 chrX 115552907 115553323 -51096973 - BGLII LTR ERVK 0 421 1 4 1466 31 82 0 0 chrX 115553660 115553733 -51096563 + AT_rich Low_complexity Low_complexity 1 73 0 4 1466 405 103 0 0 chrX 115553790 115553848 -51096448 - RMER6B LTR ERVK -403 58 1 4 1466 1650 76 0 0 chrX 115554201 115554424 -51095872 + L1_Mus1 LINE L1 6345 6567 0 4 1466 22 0 0 0 chrX 115554795 115554817 -51095479 + AT_rich Low_complexity Low_complexity 1 22 0 4 1466 260 311 91 64 chrX 115555139 115555359 -51094937 + RLTR15 LTR ERVK 45 270 -89 4 1466 1264 13 0 0 chrX 115555375 115555526 -51094770 + L1Md_A LINE L1 6432 6582 0 4 1466 225 0 0 0 chrX 115555556 115555581 -51094715 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1466 401 36 18 0 chrX 115556059 115556114 -51094182 + (TCTA)n Simple_repeat Simple_repeat 1 56 0 4 1466 24 0 0 0 chrX 115556612 115556636 -51093660 + AT_rich Low_complexity Low_complexity 1 24 0 5 1466 1478 251 76 55 chrX 115557060 115557600 -51092696 - RMER19C LTR ERVK 0 611 1 5 1466 1193 154 72 162 chrX 115557600 115557704 -51092592 - MurERV4_19-int LTR ERVK 0 5780 5694 5 1466 1610 42 0 0 chrX 115557704 115557895 -51092401 - B2_Mm1a SINE B2 -2 191 1 5 1466 1193 154 72 162 chrX 115557895 115558371 -51091925 - MurERV4_19-int LTR ERVK -87 5693 5252 5 1466 1684 142 59 16 chrX 115558409 115558690 -51091606 - MurERV4_19-int LTR ERVK -1044 4736 4454 5 1466 224 30 30 0 chrX 115558690 115558723 -51091573 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 1466 1684 142 59 16 chrX 115558723 115558763 -51091533 - MurERV4_19-int LTR ERVK -1327 4453 4403 5 1466 4421 168 7 52 chrX 115558760 115559627 -51090669 - MurERV4_19-int LTR ERVK -3067 2713 1886 5 1466 7718 196 5 8 chrX 115559627 115561181 -51089115 + Lx4B LINE L1 5491 7044 -14 5 1466 489 34 0 0 chrX 115561181 115561240 -51089056 + (TAAA)n Simple_repeat Simple_repeat 3 61 0 5 1466 397 308 71 6 chrX 115561723 115561906 -51088390 + MLT1B LTR MaLR 36 230 -160 5 1466 271 271 133 20 chrX 115561994 115562092 -51088204 + PB1D10 SINE Alu 3 111 -6 5 1466 228 130 0 0 chrX 115562097 115562143 -51088153 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 5 1466 967 141 20 50 chrX 115562311 115562512 -51087784 - Lx LINE L1 0 6654 6460 5 1466 450 0 0 0 chrX 115564133 115564183 -51086113 + (TTA)n Simple_repeat Simple_repeat 2 51 0 6 1466 3710 200 50 18 chrX 115564460 115565510 -51084786 + Lx4A LINE L1 5870 7056 -2 6 1466 24 0 0 0 chrX 115565530 115565554 -51084742 + AT_rich Low_complexity Low_complexity 1 24 0 6 1466 291 258 65 33 chrX 115565725 115565817 -51084479 + PB1D7 SINE Alu 26 120 0 6 1466 23 33 0 0 chrX 115565817 115565847 -51084449 + AT_rich Low_complexity Low_complexity 1 30 0 6 1466 510 286 193 21 chrX 115566207 115566778 -51083518 - L1MA6 LINE L1 -369 5931 5266 6 1466 303 122 0 0 chrX 115566783 115566832 -51083464 + (TA)n Simple_repeat Simple_repeat 2 50 0 6 1466 1101 321 36 8 chrX 115567008 115567542 -51082754 - L1MA6 LINE L1 -1095 5048 4500 6 1466 342 0 0 0 chrX 115567551 115567589 -51082707 + (TA)n Simple_repeat Simple_repeat 1 38 0 6 1466 892 218 15 0 chrX 115567988 115568194 -51082102 + L1_Mur2 LINE L1 907 1115 -5971 6 1466 583 158 0 0 chrX 115568194 115568295 -51082001 + MERVL_2A-int LTR ERVL 5522 5622 -139 6 1466 242 235 0 0 chrX 115568297 115568348 -51081948 + ORR1A3-int LTR MaLR 567 617 -1346 7 1466 448 289 232 20 chrX 115568365 115568563 -51081733 + MT2B LTR ERVL 362 601 0 7 1466 1115 227 142 3 chrX 115568644 115568975 -51081321 + MTEa LTR MaLR 1 377 -2 7 1466 535 168 27 9 chrX 115569065 115569196 -51081100 + L1_Mur2 LINE L1 1315 1441 -4439 6 1466 239 312 0 0 chrX 115569641 115569721 -51080575 - L1_Mur2 LINE L1 -1596 4284 4205 7 1466 3072 38 0 0 chrX 115569865 115570236 -51080060 + L1Md_A LINE L1 6212 6582 0 7 1466 295 239 147 18 chrX 115570257 115570477 -51079819 - L1_Mur2 LINE L1 -1813 4067 3815 7 1466 449 258 41 8 chrX 115570566 115570687 -51079609 - L1_Mur2 LINE L1 -2246 3631 3507 7 1466 1318 173 4 4 chrX 115572127 115572365 -51077931 + Lx LINE L1 6417 6654 0 7 1466 25 0 0 0 chrX 115572470 115572495 -51077801 + AT_rich Low_complexity Low_complexity 1 25 0 7 1466 328 279 94 30 chrX 115573033 115573236 -51077060 + L1MCb LINE L1 979 1194 -4851 7 1466 288 227 27 0 chrX 115573355 115573430 -51076866 + (TA)n Simple_repeat Simple_repeat 2 78 0 7 1466 2735 159 44 44 chrX 115573682 115574042 -51076254 + Lx3C LINE L1 752 1117 -5867 7 1466 1570 31 0 20 chrX 115574042 115574237 -51076059 + B2_Mm1a SINE B2 1 191 -2 8 1466 2735 133 40 44 chrX 115574237 115574485 -51075811 + Lx3C LINE L1 1118 1360 -4526 7 1466 4696 178 16 16 chrX 115574489 115575210 -51075086 + Lx3C LINE L1 2925 3641 -2245 7 1466 414 0 0 0 chrX 115575210 115575256 -51075040 + (CA)n Simple_repeat Simple_repeat 1 46 0 8 1466 4696 178 16 16 chrX 115575256 115575526 -51074770 + Lx3C LINE L1 3642 3915 -1971 7 1466 3058 33 2 68 chrX 115575526 115575721 -51074575 + MTA_Mm LTR MaLR 1 191 -205 8 1466 6228 21 0 0 chrX 115575721 115576440 -51073856 + L1Md_A LINE L1 5864 6582 0 8 1466 3058 33 2 68 chrX 115576440 115576668 -51073628 + MTA_Mm LTR MaLR 192 396 0 8 1466 9075 38 5 0 chrX 115576668 115577761 -51072535 + MTA_Mm-int LTR MaLR 1 1098 0 8 1466 3439 20 2 10 chrX 115577761 115578160 -51072136 + MTA_Mm LTR MaLR 1 396 0 8 1466 8495 160 16 41 chrX 115578160 115578947 -51071349 + Lx3C LINE L1 3912 4651 -1235 7 1466 1008 79 58 0 chrX 115578947 115579086 -51071210 - B1_Mm SINE Alu 0 147 1 8 1466 8495 160 16 41 chrX 115579086 115580013 -51070283 + Lx3C LINE L1 4652 5583 -303 7 1466 5822 172 26 34 chrX 115580033 115581204 -51069092 + Lx3C LINE L1 5807 6968 -8 7 1466 351 0 0 0 chrX 115581208 115581247 -51069049 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 1466 408 20 0 0 chrX 115581247 115581296 -51069000 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 8 1466 202 208 0 0 chrX 115581548 115581601 -51068695 + A-rich Low_complexity Low_complexity 1 53 0 8 1466 200 214 0 18 chrX 115582317 115582374 -51067922 + CT-rich Low_complexity Low_complexity 3 58 0 8 1466 42 48 0 0 chrX 115582496 115582559 -51067737 + AT_rich Low_complexity Low_complexity 1 63 0 8 1466 392 338 29 36 chrX 115582580 115582718 -51067578 - RSINE1 SINE B4 -24 141 5 9 1466 257 281 106 21 chrX 115582862 115583051 -51067245 + MER33 DNA MER1_type 34 238 -86 9 1466 395 269 131 37 chrX 115583338 115583759 -51066537 - L1MEf LINE L1 -1606 4540 4080 9 1466 2648 109 7 12 chrX 115584709 115585116 -51065180 + L1_Mus3 LINE L1 6232 6636 -2 9 1466 545 328 82 39 chrX 115585610 115586051 -51064245 - L1MEf LINE L1 -5348 894 435 9 1466 246 95 0 0 chrX 115586143 115586185 -51064111 + (A)n Simple_repeat Simple_repeat 1 42 0 9 1466 271 302 51 133 chrX 115586235 115586430 -51063866 - L1MEf LINE L1 -5950 292 114 9 1466 258 176 0 0 chrX 115586946 115586997 -51063299 + A-rich Low_complexity Low_complexity 1 51 0 9 1466 468 0 0 0 chrX 115587110 115587162 -51063134 + (TA)n Simple_repeat Simple_repeat 2 53 0 9 1466 758 280 15 5 chrX 115587621 115587822 -51062474 - ORR1D2 LTR MaLR -3 367 165 9 1466 18651 134 12 13 chrX 115587825 115591008 -51059288 + L1_Mus2 LINE L1 1672 4851 -1032 9 1466 6772 105 5 13 chrX 115591004 115592078 -51058218 + L1_Mus2 LINE L1 5503 6566 0 9 1466 342 0 0 0 chrX 115594682 115594720 -51055576 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 1466 535 267 89 0 chrX 115594730 115594865 -51055431 - RSINE1 SINE B4 -7 158 12 1 1466 631 268 118 14 chrX 115595285 115595574 -51054722 + RLTR17 LTR ERVK 245 618 -74 1 1466 342 45 0 0 chrX 115595728 115595772 -51054524 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1466 525 44 0 0 chrX 115595772 115595839 -51054457 + (GA)n Simple_repeat Simple_repeat 1 68 0 1 1466 225 94 0 0 chrX 115597539 115597571 -51052725 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 1 1466 26 64 0 0 chrX 115597723 115597770 -51052526 + AT_rich Low_complexity Low_complexity 1 47 0 1 1466 422 131 0 0 chrX 115598774 115598835 -51051461 - Lx4B LINE L1 -166 6892 6832 1 1466 273 272 99 0 chrX 115598896 115598977 -51051319 + L1_Mur1 LINE L1 765 853 -6129 1 1466 812 209 152 80 chrX 115598967 115599243 -51051053 - Lx4B LINE L1 -242 6816 6521 1 1466 486 143 0 26 chrX 115599559 115599674 -51050622 - L1Md_F2 LINE L1 0 6582 6471 1 1466 19172 52 2 2 chrX 115599674 115602796 -51047500 - L1Md_F3 LINE L1 -16 6568 3447 1 1466 9351 91 14 5 chrX 115602784 115603830 -51046466 - L1Md_F2 LINE L1 -100 6482 5393 1 1466 248 0 0 30 chrX 115603830 115603863 -51046433 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1 1466 9351 92 36 12 chrX 115603863 115604785 -51045511 - L1Md_F2 LINE L1 -491 5392 4480 1 1466 699 244 33 16 chrX 115604792 115604975 -51045321 - B2_Mm2 SINE B2 -9 186 1 1 1467 347 212 0 48 chrX 115605543 115605627 -51044669 + L1_Mur1 LINE L1 674 753 -6231 1 1467 4567 168 35 14 chrX 115605752 115607345 -51042951 + L1_Mur1 LINE L1 4437 5301 -585 1 1467 1138 173 40 0 chrX 115607342 115607544 -51042752 + Lx3C LINE L1 6441 6650 -326 1 1467 312 321 53 75 chrX 115607546 115607772 -51042524 - RMER12 LTR ERVK 0 1322 1102 1 1467 324 47 0 0 chrX 115607778 115607821 -51042475 - L1Md_F2 LINE L1 -760 5822 5780 1 1467 812 11 0 0 chrX 115607819 115607911 -51042385 + L1Md_F2 LINE L1 6226 6317 -265 1 1467 3071 71 8 0 chrX 115608002 115608398 -51041898 - L1Md_F2 LINE L1 -402 6180 5782 1 1467 2555 77 14 6 chrX 115608398 115608750 -51041546 + L1Md_F2 LINE L1 6226 6580 -2 1 1467 5060 110 45 5 chrX 115608916 115609701 -51040595 - RLTR22_Mus LTR ERVK -992 816 1 1 1467 1678 179 51 0 chrX 115609701 115610013 -51040283 + Lx3C LINE L1 6647 6974 -2 1 1467 293 232 0 0 chrX 115610078 115610134 -51040162 + L1_Mur1 LINE L1 702 757 -6225 1 1467 2424 190 11 1 chrX 115610251 115610946 -51039350 + Lx3C LINE L1 682 1496 -4390 1 1467 27544 98 35 105 chrX 115610947 115614765 -51035531 + L1Md_F2 LINE L1 217 4184 -1699 1 1467 192 40 0 0 chrX 115614765 115614790 -51035506 + (ATATG)n Simple_repeat Simple_repeat 4 28 0 1 1467 27544 97 5 133 chrX 115614790 115615671 -51034625 + L1Md_F2 LINE L1 4185 4423 -1460 1 1467 7949 51 4 0 chrX 115615671 115616649 -51033647 + L1Md_F3 LINE L1 5587 6568 -16 1 1467 27544 105 6 102 chrX 115616649 115618893 -51031403 + L1Md_F2 LINE L1 4424 6579 -3 1 1467 3329 209 10 31 chrX 115618891 115619721 -51030575 + Lx3C LINE L1 1485 2296 -3590 1 1467 325 191 0 60 chrX 115619707 115619807 -51030489 + Lx3C LINE L1 3041 3134 -2743 1 1467 4196 161 12 0 chrX 115619817 115620576 -51029720 + Lx3C LINE L1 4471 5238 -648 1 1467 6161 189 38 23 chrX 115620572 115620770 -51029526 + Lx3C LINE L1 5594 5787 -1189 1 1467 1048 103 14 0 chrX 115620770 115620916 -51029380 + B1_Mus1 SINE Alu 1 148 0 1 1467 6161 189 38 23 chrX 115620916 115621879 -51028417 + Lx3C LINE L1 5788 6757 -219 1 1467 414 0 0 0 chrX 115621879 115621925 -51028371 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1467 225 0 0 0 chrX 115621925 115621949 -51028347 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 1467 6161 189 38 23 chrX 115621949 115622040 -51028256 + Lx3C LINE L1 6758 6866 -110 1 1467 3819 214 70 33 chrX 115622137 115623068 -51027228 - MTC-int LTR MaLR -2 1256 292 1 1467 2208 204 169 4 chrX 115623071 115623627 -51026669 + L1_Mur1 LINE L1 210 857 -6125 1 1467 14584 129 8 16 chrX 115623627 115626808 -51023488 + L1_Mus2 LINE L1 3381 6540 -26 1 1467 3306 171 145 79 chrX 115626808 115627658 -51022638 - RMER17A2 LTR ERVK 0 906 1 1 1467 6642 98 8 23 chrX 115627658 115627690 -51022606 + L1_Mus2 LINE L1 6541 6566 0 1 1467 7320 144 8 4 chrX 115627699 115628957 -51021339 + L1_Mm LINE L1 4036 5298 -585 1 1467 3555 69 15 0 chrX 115628953 115629433 -51020863 - L1_Mus2 LINE L1 -1315 4568 4082 1 1467 9262 84 15 47 chrX 115629434 115630235 -51020061 + L1_Mus2 LINE L1 4551 5310 -573 1 1467 7923 49 2 1 chrX 115630235 115631218 -51019078 + L1Md_F2 LINE L1 5588 6571 -11 1 1467 9262 92 8 22 chrX 115631218 115632473 -51017823 + L1_Mus2 LINE L1 5311 6564 -2 1 1467 1515 347 56 66 chrX 115632490 115633846 -51016450 - RodERV21-int LTR ERV1 -782 4209 2868 1 1467 476 318 42 60 chrX 115634233 115634635 -51015661 - RodERV21-int LTR ERV1 -3059 4032 3638 1 1467 1740 178 21 54 chrX 115634675 115635098 -51015198 - RLTR9E LTR ERVK 0 409 1 1 1467 1026 87 0 0 chrX 115635530 115635668 -51014628 + B1_Mus2 SINE Alu 1 138 -9 1 1467 207 0 0 0 chrX 115635668 115635691 -51014605 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1467 342 272 0 36 chrX 115635692 115635776 -51014520 - RodERV21-int LTR ERV1 -2542 2449 2369 1 1467 3636 68 2 4 chrX 115635777 115636261 -51014035 + RLTR1C LTR ERV1 1 483 -20 1 1467 3808 300 31 12 chrX 115636280 115637399 -51012897 - RodERV21-int LTR ERV1 -2620 2371 1231 1 1467 19095 107 13 20 chrX 115637736 115641633 -51008663 + L1Md_F2 LINE L1 3148 6997 0 1 1467 26 50 0 0 chrX 115641924 115641964 -51008332 + AT_rich Low_complexity Low_complexity 1 40 0 1 1467 355 383 6 58 chrX 115642187 115642359 -51007937 + RSINE1 SINE B4 3 165 0 1 1467 576 296 44 34 chrX 115642421 115642627 -51007669 - RMER13A LTR ERVK -652 208 1 1 1467 273 119 0 0 chrX 115642846 115642888 -51007408 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1467 564 378 54 4 chrX 115642972 115643214 -51007082 - MTD LTR MaLR -51 368 115 1 1467 236 38 94 0 chrX 115643222 115643275 -51007021 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 1 1467 316 304 97 9 chrX 115643427 115643653 -51006643 + L1ME3B LINE L1 5754 5999 -241 1 1467 441 90 0 0 chrX 115644239 115644306 -51005990 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1467 1380 204 83 18 chrX 115645481 115645866 -51004430 - Lx9 LINE L1 0 7644 7235 1 1467 198 0 0 0 chrX 115646550 115646572 -51003724 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 1467 1181 238 15 15 chrX 115646715 115646979 -51003317 - ORR1C1 LTR MaLR -10 368 105 1 1467 2824 139 65 0 chrX 115646979 115647475 -51002821 + L1_Mur2 LINE L1 4227 4754 -1123 1 1467 345 40 0 0 chrX 115647476 115647526 -51002770 + Lx LINE L1 6590 6639 -15 1 1467 324 0 0 0 chrX 115647526 115647562 -51002734 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 1 1467 883 115 7 7 chrX 115647607 115647756 -51002540 + (GAAA)n Simple_repeat Simple_repeat 1 149 0 1 1467 28 71 0 0 chrX 115648021 115648077 -51002219 + AT_rich Low_complexity Low_complexity 1 56 0 1 1467 25 0 0 0 chrX 115648899 115648924 -51001372 + AT_rich Low_complexity Low_complexity 1 25 0 1 1467 402 316 24 87 chrX 115649019 115649227 -51001069 + B3A SINE B2 4 198 0 1 1467 294 29 0 0 chrX 115649266 115649301 -51000995 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1467 1295 104 16 5 chrX 115649574 115649758 -51000538 - B2_Mm2 SINE B2 -9 186 1 1 1467 16046 20 0 0 chrX 115650039 115652591 -50997705 - L1Md_A LINE L1 0 6582 4031 1 1467 21 71 0 0 chrX 115652657 115652699 -50997597 + AT_rich Low_complexity Low_complexity 1 42 0 1 1467 3673 37 11 9 chrX 115653199 115653657 -50996639 + L1Md_F3 LINE L1 6126 6584 0 1 1467 222 37 0 0 chrX 115653660 115653687 -50996609 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1467 21 0 0 0 chrX 115653749 115653770 -50996526 + AT_rich Low_complexity Low_complexity 1 21 0 1 1467 342 157 0 0 chrX 115653773 115653856 -50996440 + CT-rich Low_complexity Low_complexity 2 84 0 1 1467 907 223 20 10 chrX 115653856 115654060 -50996236 + RMER10B LTR ERVL 193 398 0 1 1467 374 326 0 0 chrX 115654264 115654359 -50995937 + RSINE1 SINE B4 42 136 -29 1 1467 242 284 104 0 chrX 115654477 115654544 -50995752 - PB1D10 SINE Alu -22 95 22 1 1467 545 285 137 36 chrX 115654740 115655264 -50995032 + L1M4b LINE L1 2641 3217 -4117 1 1467 23 0 0 0 chrX 115655316 115655339 -50994957 + AT_rich Low_complexity Low_complexity 1 23 0 1 1467 347 281 148 77 chrX 115655766 115656105 -50994191 + L1M4b LINE L1 3527 3889 -3117 1 1467 441 54 0 0 chrX 115656134 115656190 -50994106 + (TA)n Simple_repeat Simple_repeat 1 56 0 1 1467 539 266 231 60 chrX 115656190 115656458 -50993838 - ORR1E LTR MaLR -43 327 14 1 1467 1017 116 0 0 chrX 115656707 115656853 -50993443 + B1_Mm SINE Alu 2 147 0 1 1467 347 335 81 27 chrX 115656949 115657210 -50993086 + L1MD LINE L1 3512 3786 -2360 1 1467 45 79 0 0 chrX 115657252 115657353 -50992943 + AT_rich Low_complexity Low_complexity 1 101 0 1 1467 338 257 35 9 chrX 115657375 115657489 -50992807 - L1MC LINE L1 -2106 4040 3924 1 1467 881 281 149 0 chrX 115657509 115657790 -50992506 + MTD LTR MaLR 18 340 -79 1 1467 419 84 36 58 chrX 115657791 115657930 -50992366 + A-rich Low_complexity Low_complexity 2 137 0 1 1467 538 282 135 32 chrX 115658067 115658474 -50991822 - L1M4 LINE L1 -3487 3157 2709 1 1467 3917 138 25 3 chrX 115658915 115659547 -50990749 + Lx2 LINE L1 5995 6640 -357 1 1467 1254 152 22 9 chrX 115659547 115659772 -50990524 + Lx2 LINE L1 6770 6997 0 1 1467 504 0 0 0 chrX 115659816 115659872 -50990424 + (TC)n Simple_repeat Simple_repeat 2 57 0 1 1467 987 254 52 71 chrX 115659894 115660220 -50990076 + ORR1D1 LTR MaLR 55 374 0 1 1467 188 100 25 0 chrX 115660506 115660546 -50989750 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 1 1467 426 221 191 30 chrX 115660967 115661135 -50989161 + L1Md_F LINE L1 609 803 -5813 1 1467 1987 192 11 0 chrX 115661143 115661524 -50988772 + L1Md_F LINE L1 725 1109 -5507 1 1467 21826 129 10 5 chrX 115662189 115665708 -50984588 + L1Md_F LINE L1 2254 5792 -91 1 1467 4111 106 0 2 chrX 115665739 115666323 -50983973 + L1_Mus2 LINE L1 5983 6565 -1 1 1467 302 218 44 33 chrX 115666383 115666473 -50983823 - L1M4 LINE L1 -6382 160 70 1 1467 21 0 0 0 chrX 115666741 115666762 -50983534 + AT_rich Low_complexity Low_complexity 1 21 0 1 1467 6590 33 0 0 chrX 115667047 115667825 -50982471 - L1Md_A LINE L1 -3 6579 5802 1 1467 616 279 37 63 chrX 115668198 115668389 -50981907 - RMER20B LTR ERVK 0 627 442 1 1467 1043 116 14 0 chrX 115668414 115668560 -50981736 - B1_Mus1 SINE Alu 0 148 1 1 1467 2408 192 31 9 chrX 115668561 115669008 -50981288 - RMER20B LTR ERVK -170 457 1 1 1467 707 335 129 25 chrX 115669022 115670312 -50979984 + L1MC3 LINE L1 6237 7661 -124 1 1467 195 162 0 0 chrX 115672015 115672052 -50978244 + A-rich Low_complexity Low_complexity 1 37 0 1 1467 211 241 36 36 chrX 115672433 115672489 -50977807 - B1F1 SINE Alu 0 149 94 1 1467 544 369 84 4 chrX 115672684 115672945 -50977351 + RMER15 LTR ERVL 273 554 -21 1 1467 520 200 135 23 chrX 115673769 115673902 -50976394 - B1_Mur3 SINE Alu 0 149 2 1 1467 240 335 70 52 chrX 115673972 115674202 -50976094 + Charlie1 DNA MER1_type 1442 1675 -1106 1 1467 24 0 0 0 chrX 115674228 115674252 -50976044 + AT_rich Low_complexity Low_complexity 1 24 0 1 1467 464 316 75 15 chrX 115674716 115674915 -50975381 - B3 SINE B2 -4 212 2 1 1467 227 329 106 35 chrX 115675050 115675192 -50975104 - Charlie7 DNA MER1_type -1699 913 762 2 1467 24 0 0 0 chrX 115675197 115675221 -50975075 + AT_rich Low_complexity Low_complexity 1 24 0 2 1467 1233 244 95 23 chrX 115675435 115675826 -50974470 + MTD LTR MaLR 1 419 0 2 1467 393 367 0 54 chrX 115675878 115676025 -50974271 - RSINE1 SINE B4 -23 142 4 2 1467 2089 169 189 15 chrX 115676168 115676756 -50973540 + RMER6C LTR ERVK 1 690 0 2 1467 1520 162 29 219 chrX 115676916 115677436 -50972860 + RLTR23 LTR ERV1 10 430 0 2 1467 254 222 19 0 chrX 115677436 115677488 -50972808 + PB1D7 SINE Alu 66 118 -2 2 1467 1128 68 0 0 chrX 115677710 115677857 -50972439 + B1_Mus1 SINE Alu 2 148 0 2 1467 36 0 0 0 chrX 115677857 115677893 -50972403 + AT_rich Low_complexity Low_complexity 1 36 0 2 1467 931 169 48 0 chrX 115678184 115678350 -50971946 + RMER6C LTR ERVK 517 690 0 2 1467 588 53 0 0 chrX 115678712 115678788 -50971508 + (TA)n Simple_repeat Simple_repeat 2 77 0 2 1467 769 286 108 17 chrX 115678926 115679443 -50970853 - L1MC LINE L1 -3400 2746 2183 2 1467 1538 215 35 110 chrX 115679894 115680091 -50970205 + MTC LTR MaLR 1 199 -222 2 1467 1150 62 7 0 chrX 115680091 115680237 -50970059 + B1_Mus2 SINE Alu 1 147 0 2 1467 1538 215 35 110 chrX 115680237 115680494 -50969802 + MTC LTR MaLR 200 421 0 2 1467 270 81 0 0 chrX 115680498 115680535 -50969761 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1467 289 250 0 0 chrX 115680572 115680628 -50969668 + B3A SINE B2 14 69 -129 2 1467 468 0 0 0 chrX 115680714 115680766 -50969530 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1467 1701 169 11 74 chrX 115681103 115681454 -50968842 + ORR1A4 LTR MaLR 1 329 0 2 1467 1818 216 34 3 chrX 115681457 115681843 -50968453 + ORR1A4-int LTR MaLR 4 401 -1562 2 1467 8329 30 5 2 chrX 115681857 115682851 -50967445 - L1Md_F3 LINE L1 0 6584 5588 2 1467 2374 69 31 0 chrX 115682872 115683191 -50967105 + L1_Mm LINE L1 5265 5593 -290 2 1467 950 210 28 60 chrX 115683277 115683533 -50966763 + ORR1A4-int LTR MaLR 403 640 -1323 2 1467 1881 99 31 22 chrX 115683555 115683874 -50966422 + RLTRETN_Mm LTR ERVK 1 322 0 2 1467 18360 164 34 23 chrX 115683874 115690685 -50959611 + ETnERV2-int LTR ERVK 1 7208 -198 2 1467 1884 99 31 22 chrX 115690685 115691004 -50959292 + RLTRETN_Mm LTR ERVK 1 322 0 2 1467 535 241 0 0 chrX 115691067 115691175 -50959121 + MT2B LTR ERVL 152 259 -342 2 1467 246 350 70 14 chrX 115691117 115691191 -50959105 + RLTR25A LTR ERVK 521 602 -501 2 1467 421 315 56 0 chrX 115691191 115691299 -50958997 + B1_Mus2 SINE Alu 3 116 -31 2 1467 5688 193 18 88 chrX 115691213 115692515 -50957781 + ORR1A4-int LTR MaLR 753 1963 0 2 1467 333 176 15 0 chrX 115692567 115692635 -50957661 + ORR1A4-int LTR MaLR 1848 1916 -47 2 1467 1864 146 194 3 chrX 115692635 115693026 -50957270 - RLTR45 LTR ERVK 0 482 17 2 1467 1289 178 177 5 chrX 115693029 115693356 -50956940 + ORR1A4 LTR MaLR 1 394 0 2 1467 294 224 94 8 chrX 115693460 115693577 -50956719 - L1MCa LINE L1 -5167 1341 1215 2 1467 696 40 30 0 chrX 115694037 115694137 -50956159 + (GA)n Simple_repeat Simple_repeat 2 104 0 2 1467 579 335 94 92 chrX 115694438 115695004 -50955292 - Lx8 LINE L1 -249 7224 6658 2 1467 561 278 65 10 chrX 115695275 115695559 -50954737 + L1M2 LINE L1 5277 5571 -720 2 1467 1423 272 14 12 chrX 115695557 115695985 -50954311 - L1_Rod LINE L1 -110 5770 5315 2 1467 937 147 22 6 chrX 115695985 115696163 -50954133 - L1_Mus3 LINE L1 -6 6632 6452 2 1467 868 329 20 47 chrX 115696163 115696245 -50954051 - L1_Rod LINE L1 -530 5350 5274 2 1467 466 278 128 9 chrX 115696242 115696556 -50953740 + Lx7 LINE L1 5536 5925 -264 2 1467 23 0 0 0 chrX 115696738 115696761 -50953535 + AT_rich Low_complexity Low_complexity 1 23 0 2 1467 207 69 0 0 chrX 115697032 115697061 -50953235 + (TTATA)n Simple_repeat Simple_repeat 4 32 0 2 1467 26 82 0 0 chrX 115697062 115697123 -50953173 + AT_rich Low_complexity Low_complexity 1 61 0 2 1467 298 192 0 0 chrX 115697778 115697849 -50952447 + L1Md_F2 LINE L1 5198 5274 -609 2 1467 2001 149 69 16 chrX 115697864 115698239 -50952057 - RLTR9D LTR ERVK -8 395 1 2 1467 3104 110 19 180 chrX 115698243 115698693 -50951603 + L1Md_F2 LINE L1 5277 5611 -272 2 1467 3375 81 7 0 chrX 115698693 115699135 -50951161 - L1_Mus1 LINE L1 0 6567 6123 2 1467 4009 56 6 2 chrX 115699135 115699639 -50950657 + L1Md_F2 LINE L1 5612 6117 -465 2 1467 7484 157 13 20 chrX 115699623 115700972 -50949324 + Lx2 LINE L1 5657 6996 -1 2 1467 7373 50 7 0 chrX 115702029 115702941 -50947355 - L1Md_F2 LINE L1 0 6582 5665 2 1467 1961 47 0 0 chrX 115702941 115703175 -50947121 + L1Md_F2 LINE L1 5456 5689 -194 2 1467 28 0 0 0 chrX 115703256 115703284 -50947012 + AT_rich Low_complexity Low_complexity 1 28 0 2 1467 1004 309 58 79 chrX 115703708 115704291 -50946005 + Tigger1 DNA MER2_type 1769 2328 -90 2 1467 1747 66 8 4 chrX 115704291 115704536 -50945760 + L1_Mus2 LINE L1 6320 6565 -1 2 1467 1004 309 58 79 chrX 115704536 115704607 -50945689 + Tigger1 DNA MER2_type 2329 2409 -9 2 1467 1182 228 74 89 chrX 115704742 115705122 -50945174 - ORR1D1 LTR MaLR 0 374 1 2 1467 26 64 0 0 chrX 115705434 115705481 -50944815 + AT_rich Low_complexity Low_complexity 1 47 0 2 1467 1462 265 97 36 chrX 115705578 115706075 -50944221 + MT2A LTR ERVL 1 527 -6 2 1467 677 313 43 81 chrX 115706231 115706600 -50943696 + RMER5 LTR ERV1 20 374 -160 2 1467 3592 213 64 40 chrX 115706602 115707161 -50943135 - Lx5 LINE L1 0 7050 6446 2 1467 4892 74 1 17 chrX 115707161 115707821 -50942475 + L1_Mus2 LINE L1 5917 6566 0 2 1467 3592 213 64 40 chrX 115707821 115708043 -50942253 - Lx5 LINE L1 -605 6445 6250 2 1467 442 202 28 19 chrX 115708070 115708176 -50942120 + RMER5 LTR ERV1 350 456 -78 2 1467 521 325 107 26 chrX 115708333 115708680 -50941616 - RMER5 LTR ERV1 -46 488 114 2 1467 234 0 0 0 chrX 115710510 115710536 -50939760 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2 1467 301 298 60 0 chrX 115711159 115711243 -50939053 + MTC LTR MaLR 10 98 -323 2 1467 576 93 0 0 chrX 115712197 115712294 -50938002 + (TTTTG)n Simple_repeat Simple_repeat 4 100 0 2 1467 618 14 0 0 chrX 115715010 115715081 -50935215 + (TC)n Simple_repeat Simple_repeat 2 72 0 2 1467 1043 106 0 0 chrX 115715083 115715225 -50935071 - B1_Mus1 SINE Alu -6 142 1 2 1467 2533 188 9 6 chrX 115715266 115715733 -50934563 - Lx4A LINE L1 -556 6502 6035 2 1467 3457 114 10 135 chrX 115715733 115716258 -50934038 + Lx4A LINE L1 5256 5781 -96 2 1467 1770 86 0 70 chrX 115716258 115716544 -50933752 + L1Md_F2 LINE L1 6317 6582 0 2 1467 3457 132 9 71 chrX 115716544 115716878 -50933418 + Lx4A LINE L1 5782 6035 -1023 2 1467 1067 229 147 12 chrX 115716890 115717173 -50933123 - RMER5 LTR ERV1 -168 366 57 2 1467 339 25 0 0 chrX 115717173 115717213 -50933083 + (CAAT)n Simple_repeat Simple_repeat 2 41 0 2 1467 1067 229 147 12 chrX 115717213 115717248 -50933048 - RMER5 LTR ERV1 -478 56 7 2 1467 506 344 88 29 chrX 115717256 115717630 -50932666 + L1M4 LINE L1 1244 1639 -4903 2 1467 1681 98 0 96 chrX 115717631 115717913 -50932383 + L1_Mus1 LINE L1 6313 6567 0 2 1467 3216 41 5 8 chrX 115718257 115718654 -50931642 - MTA_Mm LTR MaLR 0 396 1 2 1467 5140 78 7 3 chrX 115718654 115719367 -50930929 - MTA_Mm-int LTR MaLR 0 1098 382 2 1467 1391 50 0 6 chrX 115719367 115719548 -50930748 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2 1467 1515 38 0 0 chrX 115719564 115719882 -50930414 + (TTC)n Simple_repeat Simple_repeat 1 318 0 2 1467 24529 92 8 12 chrX 115719882 115723015 -50927281 - L1Md_F2 LINE L1 -20 6562 3446 2 1467 3870 76 4 4 chrX 115723015 115723518 -50926778 - RLTR1C LTR ERV1 0 503 1 2 1467 24529 96 11 12 chrX 115723518 115724977 -50925319 - L1Md_F2 LINE L1 -2434 3449 1978 2 1467 287 25 25 0 chrX 115724977 115725017 -50925279 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2 1467 24529 115 47 15 chrX 115725017 115726536 -50923760 - L1Md_F2 LINE L1 -3906 1977 392 2 1467 2782 78 10 0 chrX 115726536 115726923 -50923373 - MTA_Mm-int LTR MaLR -707 391 1 2 1467 3262 31 13 3 chrX 115726925 115727315 -50922981 - MTA_Mm LTR MaLR -2 394 1 2 1467 2973 31 0 149 chrX 115727335 115727791 -50922505 + RLTR10 LTR ERVK 1 388 -2 2 1467 15853 25 9 16 chrX 115727795 115729789 -50920507 + RLTR10-int LTR ERVK 3 1984 -3 2 1467 2973 31 0 149 chrX 115729791 115730247 -50920049 + RLTR10 LTR ERVK 1 388 -2 2 1467 285 151 0 0 chrX 115730534 115730587 -50919709 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1467 24 53 0 0 chrX 115731333 115731371 -50918925 + AT_rich Low_complexity Low_complexity 1 38 0 2 1467 29 28 0 0 chrX 115731507 115731543 -50918753 + AT_rich Low_complexity Low_complexity 1 36 0 2 1467 686 215 6 0 chrX 115731683 115731841 -50918455 + L1_Mur2 LINE L1 441 599 -6487 2 1467 4094 126 95 5 chrX 115731839 115732524 -50917772 + L1_Mur2 LINE L1 3876 4623 -1254 2 1467 186 43 0 0 chrX 115732524 115732547 -50917749 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1467 4094 126 95 5 chrX 115732547 115732653 -50917643 + L1_Mur2 LINE L1 4624 4737 -1140 2 1467 1698 173 35 29 chrX 115733354 115733670 -50916626 + ORR1A3 LTR MaLR 1 318 -8 2 1467 1737 196 12 0 chrX 115733674 115734020 -50916276 + ORR1A3-int LTR MaLR 1 350 -1613 2 1467 4646 204 19 8 chrX 115734028 115734859 -50915437 + RMER13A LTR ERVK 3 842 -18 2 1467 3694 188 47 100 chrX 115734855 115734970 -50915326 + ORR1A3-int LTR MaLR 351 461 -1048 2 1467 3043 179 33 16 chrX 115734970 115735583 -50914713 + Lx LINE L1 6024 6646 -8 2 1467 396 0 0 0 chrX 115735584 115735628 -50914668 + (TAAA)n Simple_repeat Simple_repeat 4 47 0 2 1467 3694 169 67 124 chrX 115735628 115736569 -50913727 + ORR1A3-int LTR MaLR 455 1341 -622 2 183 880 181 65 86 chrX 115736569 115736633 -50913663 - L1_Mur3 LINE L1 -1958 3922 3846 2 1468 492 18 0 0 chrX 115736633 115736690 -50913606 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1468 880 181 65 86 chrX 115736690 115736915 -50913381 - L1_Mur3 LINE L1 -2035 3845 3640 2 1468 24041 154 40 33 chrX 115736942 115743226 -50907070 - L1_Mus1 LINE L1 -1 6566 272 2 1468 252 264 20 53 chrX 115743258 115743378 -50906918 + Lx6 LINE L1 7314 7430 -30 2 1468 2825 108 0 10 chrX 115743378 115743782 -50906514 - MTB LTR MaLR 0 400 1 2 1468 252 264 20 53 chrX 115743782 115743813 -50906483 + Lx6 LINE L1 7431 7460 0 2 1468 29404 127 9 15 chrX 115744050 115745462 -50904834 + L1Md_F2 LINE L1 569 1969 -3914 2 1468 255 79 0 0 chrX 115745462 115745500 -50904796 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 1468 29404 86 5 2 chrX 115745500 115749103 -50901193 + L1Md_F2 LINE L1 1970 5583 -300 2 1468 7172 87 13 0 chrX 115749105 115750087 -50900209 + L1Md_F2 LINE L1 5587 6581 -1 2 1468 336 293 56 16 chrX 115750122 115750247 -50900049 + B1F SINE Alu 19 148 -1 2 1468 338 323 78 31 chrX 115750260 115750516 -50899780 + L1MEf LINE L1 1134 1401 -4799 2 1468 5348 164 117 27 chrX 115750895 115751178 -50899118 + Lx3A LINE L1 3 277 -6707 2 1468 6548 82 26 10 chrX 115751178 115752092 -50898204 + RLTR13B3 LTR ERVK 1 929 0 2 1468 11831 138 36 11 chrX 115752092 115754992 -50895304 + Lx3A LINE L1 278 3297 -2589 2 1468 679 99 3 5 chrX 115754992 115755102 -50895194 + B1_Mm SINE Alu 3 111 -9 2 1468 2881 88 0 12 chrX 115755111 115755238 -50895058 + MTB LTR MaLR 1 127 -273 2 1468 3415 33 2 0 chrX 115755238 115755633 -50894663 + MTA_Mm LTR MaLR 1 396 0 2 1468 2881 88 0 12 chrX 115755633 115755910 -50894386 + MTB LTR MaLR 128 400 0 2 1468 321 26 0 0 chrX 115755921 115755959 -50894337 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 2 1468 7697 166 38 33 chrX 115755959 115757195 -50893101 + Lx3A LINE L1 4682 5928 -1053 2 1468 267 31 0 0 chrX 115757195 115757227 -50893069 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 1468 7697 139 34 9 chrX 115757227 115758251 -50892045 + Lx3A LINE L1 5929 6979 -2 2 1468 207 252 26 17 chrX 115758406 115758523 -50891773 + (TTATA)n Simple_repeat Simple_repeat 5 122 0 2 1468 25 51 0 0 chrX 115758600 115758639 -50891657 + AT_rich Low_complexity Low_complexity 1 39 0 2 1468 674 351 67 13 chrX 115758716 115759178 -50891118 - Lx8 LINE L1 -354 7119 6633 2 1468 201 169 0 0 chrX 115759379 115759438 -50890858 + (TTAGGG)n Simple_repeat Simple_repeat 5 63 0 2 1468 26 0 0 0 chrX 115759544 115759570 -50890726 + AT_rich Low_complexity Low_complexity 1 26 0 2 1468 4844 63 8 5 chrX 115759717 115760339 -50889957 + RLTR1 LTR ERV1 1 624 0 2 1468 236 353 26 36 chrX 115760351 115760545 -50889751 - Lx8 LINE L1 -509 6964 6773 3 1468 227 103 26 0 chrX 115761200 115761239 -50889057 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1468 195 42 0 0 chrX 115761424 115761448 -50888848 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1468 408 82 0 0 chrX 115761864 115761925 -50888371 + (TC)n Simple_repeat Simple_repeat 1 61 0 3 1468 180 0 0 0 chrX 115761925 115761945 -50888351 + (TA)n Simple_repeat Simple_repeat 1 20 0 3 1468 17096 200 33 25 chrX 115761945 115762175 -50888121 - L1VL2 LINE L1 -371 5515 5309 3 1468 2550 118 33 50 chrX 115762175 115762596 -50887700 - L1_Mus2 LINE L1 -3 6563 6150 3 1468 17096 200 33 25 chrX 115762596 115764745 -50885551 - L1VL2 LINE L1 -578 5308 3208 3 1468 261 0 0 0 chrX 115764745 115764774 -50885522 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1468 17096 200 33 25 chrX 115764774 115765743 -50884553 - L1VL2 LINE L1 -2679 3207 2163 3 1468 459 0 0 0 chrX 115765743 115765794 -50884502 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1468 17096 200 33 25 chrX 115765794 115766349 -50883947 - L1VL2 LINE L1 -3724 2162 1591 3 1468 333 0 0 0 chrX 115766349 115766386 -50883910 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 1468 17096 164 12 59 chrX 115766386 115767399 -50882897 - L1VL2 LINE L1 -4296 1590 609 3 1468 3390 242 45 38 chrX 115767477 115768293 -50882003 + RMER21B LTR ERV1 1 822 -20 3 1468 499 272 79 22 chrX 115768295 115768434 -50881862 + RMER21A LTR ERV1 696 842 0 3 1468 982 262 26 15 chrX 115768448 115768712 -50881584 + RodERV21-int LTR ERV1 18 284 -4707 3 1468 760 288 89 65 chrX 115768786 115769429 -50880867 + RodERV21-int LTR ERV1 290 947 -4044 3 1468 2425 241 55 19 chrX 115769441 115770080 -50880216 + RodERV21-int LTR ERV1 1069 1730 -3261 3 1468 2520 218 126 43 chrX 115770076 115771509 -50878787 + RodERV21-int LTR ERV1 3432 4983 -8 3 1468 649 221 30 102 chrX 115771511 115771677 -50878619 + RMER21A LTR ERV1 1 154 -688 3 1468 1106 206 38 33 chrX 115771681 115771738 -50878558 + RMER21A LTR ERV1 733 788 -159 3 1468 1816 194 3 0 chrX 115771738 115772063 -50878233 - ORR1A2 LTR MaLR -1 326 1 3 1468 1106 206 38 33 chrX 115772063 115772216 -50878080 + RMER21A LTR ERV1 789 944 -3 3 1468 486 193 0 0 chrX 115772216 115772297 -50877999 + RMER21B LTR ERV1 762 842 0 3 1468 284 310 10 29 chrX 115772362 115772465 -50877831 - B2_Mm2 SINE B2 -93 102 2 3 1468 274 326 0 0 chrX 115772797 115772892 -50877404 + BC1_Mm scRNA scRNA 3 97 -55 3 1468 22 0 0 0 chrX 115772986 115773008 -50877288 + AT_rich Low_complexity Low_complexity 1 22 0 3 1468 32525 69 2 2 chrX 115773610 115779782 -50870514 - L1Md_F3 LINE L1 -15 6569 440 3 1468 313 301 42 58 chrX 115780128 115780248 -50870048 - RMER15 LTR ERVL -21 554 437 3 1468 290 235 0 0 chrX 115780641 115780692 -50869604 - MTE2b LTR MaLR -201 178 128 3 1468 565 256 0 8 chrX 115780687 115780809 -50869487 + MTC LTR MaLR 301 421 0 3 1468 488 271 41 83 chrX 115780834 115781100 -50869196 + L1M4 LINE L1 5312 5566 -608 3 1468 2958 52 3 0 chrX 115781682 115782050 -50868246 - L1Md_F2 LINE L1 -242 6340 5972 3 1468 674 140 7 22 chrX 115782050 115782235 -50868061 + L1Md_F2 LINE L1 6444 6582 0 3 1468 282 333 34 42 chrX 115782340 115782459 -50867837 - MLT1C LTR MaLR -163 304 187 3 1468 30 103 0 0 chrX 115783039 115783146 -50867150 + AT_rich Low_complexity Low_complexity 1 107 0 3 1468 270 330 48 34 chrX 115783318 115783525 -50866771 + L1MC3 LINE L1 7354 7563 -222 3 1468 10098 163 21 6 chrX 115785682 115787567 -50862729 - Lx LINE L1 -8 6646 4733 3 1468 279 71 0 0 chrX 115787567 115787609 -50862687 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 3 1468 10098 179 15 2 chrX 115787609 115787702 -50862594 - Lx LINE L1 -1151 4732 4631 3 1468 198 0 0 0 chrX 115787702 115787724 -50862572 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 3 1468 10098 179 15 2 chrX 115787724 115788379 -50861917 - Lx LINE L1 -1253 4630 3970 3 1468 23835 29 0 0 chrX 115788379 115791905 -50858391 - L1Md_T LINE L1 0 6582 3105 3 1468 15917 177 21 5 chrX 115791899 115792703 -50857593 - L1_Mur1 LINE L1 -335 5551 4736 3 1468 279 71 0 0 chrX 115792703 115792745 -50857551 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 3 1468 15917 177 21 5 chrX 115792745 115792838 -50857458 - L1_Mur1 LINE L1 -1151 4735 4638 3 1468 198 0 0 0 chrX 115792838 115792860 -50857436 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 3 1468 15917 177 21 5 chrX 115792860 115795058 -50855238 - L1_Mur1 LINE L1 -1249 4637 2407 3 1468 1402 219 31 11 chrX 115795064 115795350 -50854946 - L1VL2 LINE L1 -5897 438 147 3 1468 275 219 13 52 chrX 115795530 115795561 -50854735 + polypyrimidine Low_complexity Low_complexity 45 76 0 3 1468 1421 12 12 0 chrX 115795561 115795731 -50854565 + (TTTC)n Simple_repeat Simple_repeat 4 175 0 3 1468 275 219 13 52 chrX 115795731 115795776 -50854520 + polypyrimidine Low_complexity Low_complexity 3 44 0 3 1468 593 248 118 0 chrX 115796054 115796215 -50854081 + Lx3B LINE L1 6791 6970 -3 3 1468 2077 115 35 0 chrX 115796577 115796889 -50853407 + ORR1A2 LTR MaLR 1 323 -4 3 1468 615 157 0 0 chrX 115796891 115796999 -50853297 + CT-rich Low_complexity Low_complexity 3 110 0 3 1468 3576 74 27 4 chrX 115797088 115797575 -50852721 + L1Md_F2 LINE L1 6077 6574 -8 3 1468 530 168 66 0 chrX 115797576 115797713 -50852583 + L1VL4 LINE L1 763 908 -5394 3 1468 284 271 32 26 chrX 115797721 115797837 -50852459 + L1_Mur1 LINE L1 670 873 -6109 3 1468 242 301 72 0 chrX 115797927 115798010 -50852286 + L1_Mur1 LINE L1 741 829 -6153 3 1468 17436 196 34 19 chrX 115798024 115799519 -50850777 + L1_Mur1 LINE L1 465 1966 -3920 3 1468 183 42 0 0 chrX 115799519 115799543 -50850753 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 3 1468 17436 171 42 16 chrX 115799543 115802464 -50847832 + L1_Mur1 LINE L1 1967 4976 -910 3 1468 736 208 134 16 chrX 115802452 115802638 -50847658 + Lx2B LINE L1 6780 6987 -13 3 1468 24 0 0 0 chrX 115802974 115802998 -50847298 + AT_rich Low_complexity Low_complexity 1 24 0 3 1468 24 53 0 0 chrX 115803671 115803709 -50846587 + AT_rich Low_complexity Low_complexity 1 38 0 3 1468 895 126 36 52 chrX 115803736 115803929 -50846367 + MusHAL1 LINE L1 740 929 -1783 3 1468 22 0 0 0 chrX 115805602 115805624 -50844672 + AT_rich Low_complexity Low_complexity 1 22 0 3 1468 279 0 0 0 chrX 115806583 115806614 -50843682 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1468 510 343 38 61 chrX 115806633 115806897 -50843399 - MTE2a LTR MaLR -58 321 64 3 1468 357 82 0 0 chrX 115807275 115807324 -50842972 + (CATA)n Simple_repeat Simple_repeat 2 50 0 3 1468 2418 157 26 2 chrX 115807610 115808031 -50842265 + Lx LINE L1 6219 6649 -5 3 1468 24 67 0 0 chrX 115808607 115808652 -50841644 + AT_rich Low_complexity Low_complexity 1 45 0 3 1468 29 78 0 0 chrX 115808989 115809053 -50841243 + AT_rich Low_complexity Low_complexity 1 64 0 3 1468 396 0 0 0 chrX 115809276 115809320 -50840976 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 1468 194 62 31 0 chrX 115809569 115809601 -50840695 + (TTTTA)n Simple_repeat Simple_repeat 5 37 0 3 1468 697 282 99 19 chrX 115809725 115810087 -50840209 + L1MA6 LINE L1 5504 5894 -406 3 1468 21 36 0 0 chrX 115810625 115810653 -50839643 + AT_rich Low_complexity Low_complexity 1 28 0 3 1468 1025 122 0 13 chrX 115810697 115810846 -50839450 + B1_Mus2 SINE Alu 1 147 0 3 1468 251 28 0 27 chrX 115810846 115810883 -50839413 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 3 1468 391 210 10 10 chrX 115813117 115813218 -50837078 + L1VL2 LINE L1 85 185 -6150 3 1468 3083 181 21 15 chrX 115813234 115814378 -50835918 + L1Md_F LINE L1 352 1519 -4364 3 1468 37760 43 0 3 chrX 115814384 115820605 -50829691 - L1Md_T LINE L1 0 6585 285 3 1468 3313 54 0 11 chrX 115820602 115821049 -50829247 + L1Md_F LINE L1 1505 1946 -3937 3 1468 778 72 9 0 chrX 115821047 115821158 -50829138 + L1_Mm LINE L1 1424 1535 -4348 3 1468 425 0 0 0 chrX 115821164 115821220 -50829076 + L1_Mm LINE L1 1660 1715 -4168 3 1468 1625 138 16 246 chrX 115821220 115821837 -50828459 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1468 6150 36 5 12 chrX 115821837 115822588 -50827708 - IAPEz-int LTR ERVK 0 6481 5736 3 1468 2244 61 0 0 chrX 115822587 115822865 -50827431 - IAPEz-int LTR ERVK -4845 1636 1359 3 1468 3549 77 20 39 chrX 115822865 115823518 -50826778 - IAPEz-int LTR ERVK -5819 662 168 3 1468 236 302 0 0 chrX 115823518 115823571 -50826725 - RLTR27 LTR ERVK -34 275 223 3 1468 782 102 0 9 chrX 115823571 115823680 -50826616 - IAPEz-int LTR ERVK -7329 252 145 3 1468 227 267 0 0 chrX 115823680 115823725 -50826571 - RLTR27 LTR ERVK -34 275 231 3 1468 556 142 16 124 chrX 115823725 115823854 -50826442 - IAPEz-int LTR ERVK -6358 123 9 3 1468 1703 133 13 246 chrX 115823855 115824474 -50825822 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1468 23622 144 17 16 chrX 115824474 115824903 -50825393 + L1_Mus2 LINE L1 1710 2129 -3754 3 1468 2756 66 0 64 chrX 115824903 115825293 -50825003 + RLTR10B2 LTR ERVK 1 365 0 3 1468 23622 144 17 16 chrX 115825293 115828545 -50821751 + L1_Mus2 LINE L1 2130 5405 -478 3 1468 351 60 23 45 chrX 115828545 115828633 -50821663 + (CAA)n Simple_repeat Simple_repeat 2 87 0 3 1468 23622 99 5 4 chrX 115828633 115829804 -50820492 + L1_Mus2 LINE L1 5406 6565 -1 3 1468 685 291 70 20 chrX 115830851 115831051 -50819245 - B3 SINE B2 0 216 7 3 1468 290 342 35 58 chrX 115831282 115831453 -50818843 + RLTR8 LTR ERVK 199 365 0 3 1468 21 57 0 0 chrX 115831499 115831534 -50818762 + AT_rich Low_complexity Low_complexity 1 35 0 3 1468 3228 36 18 0 chrX 115831654 115832043 -50818253 - MTA_Mm LTR MaLR 0 396 1 3 1468 7577 62 30 92 chrX 115832043 115833213 -50817083 - MTA_Mm-int LTR MaLR 0 1098 1 3 1468 3273 41 5 2 chrX 115833213 115833608 -50816688 - MTA_Mm LTR MaLR 0 396 1 3 1468 351 0 0 0 chrX 115833650 115833689 -50816607 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1468 22 0 0 0 chrX 115834147 115834169 -50816127 + AT_rich Low_complexity Low_complexity 1 22 0 3 1468 21 0 0 0 chrX 115834816 115834837 -50815459 + AT_rich Low_complexity Low_complexity 1 21 0 3 1468 295 321 23 91 chrX 115836448 115836623 -50813673 + RMER17C-int LTR ERVK 362 524 -2714 3 1468 674 320 48 54 chrX 115836602 115836975 -50813321 + RodERV21-int LTR ERV1 730 1100 -3891 3 1468 2082 63 1 9 chrX 115837298 115837610 -50812686 + MTA_Mm LTR MaLR 1 301 -106 3 1468 1388 60 22 0 chrX 115837545 115837727 -50812569 + MT2C_Mm LTR ERVL 290 475 0 3 1468 5061 288 16 21 chrX 115837731 115839085 -50811211 + RodERV21-int LTR ERV1 1373 2718 -2273 3 1468 538 366 24 42 chrX 115839202 115839701 -50810595 + RodERV21-int LTR ERV1 3585 4074 -3017 3 1468 1438 366 37 51 chrX 115841037 115842388 -50807908 + RodERV21-int LTR ERV1 2693 4024 -967 3 1468 11904 136 4 27 chrX 115843780 115845747 -50804549 + L1_Mus2 LINE L1 3933 5874 -9 3 1468 1243 126 16 0 chrX 115845747 115845938 -50804358 + B2_Mm2 SINE B2 2 195 0 3 1468 5748 132 3 79 chrX 115845938 115846685 -50803611 + L1_Mus2 LINE L1 5873 6564 -2 3 1468 1256 109 31 22 chrX 115846702 115846927 -50803369 - L1_Mus4 LINE L1 -9 6627 6401 3 1468 287 268 12 12 chrX 115847317 115847400 -50802896 + MLT1E1A LTR MaLR 596 678 -2 3 1468 1057 257 55 28 chrX 115847424 115847788 -50802508 + ORR1D1 LTR MaLR 1 374 0 3 1468 27 81 0 0 chrX 115847999 115848061 -50802235 + AT_rich Low_complexity Low_complexity 1 62 0 3 1468 495 358 102 19 chrX 115848094 115848456 -50801840 - MLT1H LTR MaLR -128 421 30 3 1468 225 0 0 0 chrX 115848506 115848531 -50801765 + (TAA)n Simple_repeat Simple_repeat 1 25 0 3 1468 284 403 51 28 chrX 115848749 115848966 -50801330 + MER21B LTR ERV1 1 222 -641 3 1468 621 271 0 0 chrX 115848966 115849106 -50801190 + URR1B DNA MER1_type 1 140 -85 3 1468 3340 143 108 18 chrX 115849106 115849724 -50800572 + Lx3B LINE L1 6300 6973 0 3 1468 613 190 0 8 chrX 115849731 115849853 -50800443 + URR1B DNA MER1_type 105 225 0 3 1468 843 387 71 25 chrX 115849853 115850373 -50799923 + MER21B LTR ERV1 215 758 -105 3 1468 451 202 0 0 chrX 115850577 115850671 -50799625 + ORR1A4 LTR MaLR 1 94 -235 3 1468 1993 202 10 3 chrX 115850694 115851081 -50799215 - ORR1B1 LTR MaLR 0 394 5 3 1468 907 338 67 34 chrX 115851502 115852259 -50798037 + ERVL-int LTR ERVL 4976 5757 0 3 1468 1126 309 70 20 chrX 115852266 115852622 -50797674 + MTE2b LTR MaLR 1 374 -5 4 1468 457 350 50 17 chrX 115852630 115852868 -50797428 + MTE2b-int LTR MaLR 1 246 -1334 4 1468 23 0 0 0 chrX 115853180 115853203 -50797093 + AT_rich Low_complexity Low_complexity 1 23 0 4 1468 1115 135 5 74 chrX 115853643 115853859 -50796437 + RMER16 LTR ERVK 239 439 -94 4 1468 675 181 14 0 chrX 115854069 115854207 -50796089 + URR1A DNA MER1_type 82 221 -5 4 1468 649 207 203 16 chrX 115854281 115854463 -50795833 - B3 SINE B2 0 216 1 4 1468 239 0 32 0 chrX 115854578 115854609 -50795687 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 1468 917 315 97 56 chrX 115854661 115855939 -50794357 - L1M2 LINE L1 -518 5773 4432 4 1468 256 296 61 10 chrX 115855939 115856038 -50794258 - ORR1D1 LTR MaLR -3 371 268 4 1468 24 0 0 0 chrX 115856357 115856381 -50793915 + AT_rich Low_complexity Low_complexity 1 24 0 4 1468 1098 298 15 18 chrX 115857331 115857666 -50792630 + Lx5 LINE L1 6706 7039 -11 4 1468 822 80 0 0 chrX 115857992 115858104 -50792192 + B1_Mm SINE Alu 35 146 -1 4 1468 252 0 0 0 chrX 115858104 115858132 -50792164 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 4 1468 435 19 0 0 chrX 115858568 115858620 -50791676 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1468 1664 102 8 4 chrX 115859398 115859644 -50790652 - L1_Mus2 LINE L1 -1 6565 6319 4 1468 1042 218 15 0 chrX 115859919 115860121 -50790175 - URR1B DNA MER1_type -1 224 20 4 1468 21 82 0 0 chrX 115860298 115860347 -50789949 + AT_rich Low_complexity Low_complexity 1 49 0 4 1468 387 202 0 0 chrX 115860498 115860592 -50789704 + CT-rich Low_complexity Low_complexity 3 96 0 4 1468 28315 142 24 23 chrX 115860775 115867073 -50783223 - L1_Mus1 LINE L1 0 6567 270 4 1468 1744 177 25 19 chrX 115867304 115867621 -50782675 + ORR1A2 LTR MaLR 1 319 -8 4 1469 25 51 0 0 chrX 115868061 115868100 -50782196 + AT_rich Low_complexity Low_complexity 1 39 0 4 1469 32 0 0 0 chrX 115868178 115868210 -50782086 + AT_rich Low_complexity Low_complexity 1 32 0 4 1469 921 66 0 0 chrX 115868847 115868968 -50781328 + (TCTA)n Simple_repeat Simple_repeat 2 122 0 4 1469 288 354 10 0 chrX 115868976 115869072 -50781224 - ID_B1 SINE B4 -28 196 100 4 1469 475 284 213 100 chrX 115869225 115869554 -50780742 + ORR1D2 LTR MaLR 1 366 -4 4 1469 341 75 24 59 chrX 115869698 115869783 -50780513 + T-rich Low_complexity Low_complexity 2 83 0 4 1469 31658 97 21 10 chrX 115869807 115875880 -50774416 - L1Md_F2 LINE L1 -11 6571 446 4 1469 1301 253 7 71 chrX 115875880 115876288 -50774008 - L1VL2 LINE L1 -5511 824 443 4 1469 285 315 55 39 chrX 115876467 115876800 -50773496 - L1VL2 LINE L1 -5784 574 120 4 1469 24 32 0 0 chrX 115876858 115876889 -50773407 + AT_rich Low_complexity Low_complexity 1 31 0 4 1469 384 40 0 0 chrX 115876889 115876939 -50773357 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1469 1364 216 56 14 chrX 115877169 115877602 -50772694 + RMER17C LTR ERVK 16 439 -519 4 1469 2083 266 85 10 chrX 115877783 115878372 -50771924 + MER67B LTR ERV1 29 661 0 4 1469 357 354 36 24 chrX 115878435 115878600 -50771696 + MER76 LTR ERVL 413 579 -112 4 1469 212 309 22 77 chrX 115878858 115878949 -50771347 - B1F SINE Alu -51 98 13 4 1469 270 0 0 0 chrX 115879025 115879055 -50771241 + (TATG)n Simple_repeat Simple_repeat 3 32 0 4 1469 234 0 0 0 chrX 115879055 115879080 -50771216 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1469 556 70 12 0 chrX 115879245 115879331 -50770965 - L1_Mus1 LINE L1 0 6567 6481 4 1469 505 348 6 41 chrX 115879747 115879918 -50770378 + RSINE1 SINE B4 1 165 0 4 1469 239 344 8 8 chrX 115879924 115880050 -50770246 + (CA)n Simple_repeat Simple_repeat 1 126 0 4 1469 2411 70 6 3 chrX 115880067 115880394 -50769902 + L1_Mus1 LINE L1 6240 6567 0 4 1469 25 0 0 0 chrX 115880394 115880419 -50769877 + AT_rich Low_complexity Low_complexity 1 25 0 4 1469 206 260 41 0 chrX 115880971 115881044 -50769252 + GA-rich Low_complexity Low_complexity 4 79 0 4 1469 507 14 42 0 chrX 115881945 115882017 -50768279 + (TG)n Simple_repeat Simple_repeat 1 75 0 4 1469 280 376 64 67 chrX 115882038 115882320 -50767976 - B4 SINE B4 -11 281 1 4 1469 3798 83 2 10 chrX 115882653 115883176 -50767120 - MURVY-LTR LTR ERV1 0 519 1 4 1469 1063 88 7 0 chrX 115883283 115883430 -50766866 + B1_Mus1 SINE Alu 1 148 0 4 1469 282 106 0 0 chrX 115883448 115883495 -50766801 + (CAAAG)n Simple_repeat Simple_repeat 2 48 0 4 1469 21 0 0 0 chrX 115883607 115883628 -50766668 + AT_rich Low_complexity Low_complexity 1 21 0 4 1469 1031 116 0 13 chrX 115883719 115883868 -50766428 + B1_Mus1 SINE Alu 1 147 -1 4 1469 393 22 0 0 chrX 115883886 115883932 -50766364 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 4 1469 1066 95 0 26 chrX 115884759 115884910 -50765386 + B1_Mus2 SINE Alu 1 147 0 4 1469 412 288 29 9 chrX 115884980 115885085 -50765211 + PB1D7 SINE Alu 6 112 -8 4 1469 306 0 0 0 chrX 115886345 115886379 -50763917 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 4 1469 4410 12 2 0 chrX 115886691 115887183 -50763113 - MT2_Mm LTR ERVL 0 493 1 4 1469 21 36 0 0 chrX 115887222 115887250 -50763046 + AT_rich Low_complexity Low_complexity 1 28 0 4 1469 287 171 0 28 chrX 115887423 115887495 -50762801 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 4 1469 1316 243 28 7 chrX 115887505 115887787 -50762509 - Lx4B LINE L1 -10 7048 6761 4 1469 221 175 0 0 chrX 115888031 115888071 -50762225 + A-rich Low_complexity Low_complexity 1 40 0 4 1469 283 109 0 42 chrX 115888584 115888632 -50761664 + U2 snRNA snRNA 1 46 -142 4 1469 198 0 0 0 chrX 115888924 115888946 -50761350 + (TA)n Simple_repeat Simple_repeat 1 22 0 4 1469 2467 97 3 3 chrX 115889207 115889559 -50760737 - L1Md_F2 LINE L1 0 6582 6231 4 1469 920 113 0 47 chrX 115889560 115889709 -50760587 - L1Md_F LINE L1 -298 5585 5444 4 1469 16178 88 2 36 chrX 115889726 115892166 -50758130 - L1Md_F LINE L1 -944 4939 2583 4 1469 6010 127 5 15 chrX 115892160 115893632 -50756664 - L1Md_F LINE L1 -4217 1666 211 4 1469 11026 192 34 19 chrX 115893632 115896198 -50754098 - L1_Mm LINE L1 -1379 4504 1901 4 1469 29 28 0 0 chrX 115896554 115896590 -50753706 + AT_rich Low_complexity Low_complexity 1 36 0 4 1469 256 289 0 0 chrX 115896610 115896662 -50753634 - B1F SINE Alu -85 64 13 4 1469 914 126 0 0 chrX 115896867 115897002 -50753294 + B1_Mus2 SINE Alu 1 135 -12 4 1469 29 0 0 0 chrX 115897206 115897235 -50753061 + AT_rich Low_complexity Low_complexity 1 29 0 4 1469 4829 142 85 14 chrX 115897424 115897529 -50752767 - Lx2 LINE L1 -6 6991 6866 4 1469 387 0 0 0 chrX 115897529 115897572 -50752724 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1469 4829 142 85 14 chrX 115897572 115898376 -50751920 - Lx2 LINE L1 -132 6865 6019 4 1469 745 335 89 21 chrX 115898719 115899057 -50751239 - ORR1D2 LTR MaLR -9 361 1 4 1469 1896 49 7 70 chrX 115899563 115899847 -50750449 + L1Md_F2 LINE L1 6317 6582 0 4 1469 35 95 0 0 chrX 115900314 115900419 -50749877 + AT_rich Low_complexity Low_complexity 1 105 0 4 1469 1277 270 110 80 chrX 115901023 115901388 -50748908 + RMER2 LTR ERV1 1 361 -206 4 1469 5411 44 0 0 chrX 115901388 115902047 -50748249 - L1Md_T LINE L1 0 6582 5924 4 1469 1277 270 110 80 chrX 115902047 115902228 -50748068 + RMER2 LTR ERV1 362 563 -4 4 1469 26 30 0 0 chrX 115902551 115902584 -50747712 + AT_rich Low_complexity Low_complexity 1 33 0 4 1469 405 334 137 35 chrX 115902631 115902896 -50747400 + L1M4 LINE L1 5351 5653 -525 4 1469 528 16 0 0 chrX 115902896 115902957 -50747339 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 1469 405 347 79 26 chrX 115902957 115903085 -50747211 + L1M4 LINE L1 5652 5783 -391 4 1469 411 305 78 7 chrX 115903370 115903512 -50746784 + RMER15 LTR ERVL 424 575 0 4 1469 6939 87 2 5 chrX 115903616 115904606 -50745690 - L1_Mm LINE L1 -1584 4299 3313 4 1469 9534 91 2 1 chrX 115904606 115905906 -50744390 + L1_Mm LINE L1 4284 5586 -297 4 1469 7127 85 6 7 chrX 115905906 115906898 -50743398 + L1Md_F2 LINE L1 5587 6577 -5 4 1469 9534 91 2 1 chrX 115906898 115906911 -50743385 + L1_Mm LINE L1 5587 5599 -284 4 1469 338 264 74 98 chrX 115907177 115907421 -50742875 + Lx9 LINE L1 7399 7636 -8 4 1469 387 335 39 62 chrX 115907471 115907649 -50742647 + ID_B1 SINE B4 2 175 -49 4 1469 26 30 0 0 chrX 115907883 115907916 -50742380 + AT_rich Low_complexity Low_complexity 1 33 0 4 1469 4230 129 23 58 chrX 115908344 115909075 -50741221 - RMER19A LTR ERVK -31 706 1 4 1469 23 54 0 0 chrX 115909240 115909277 -50741019 + AT_rich Low_complexity Low_complexity 1 37 0 4 1469 2848 189 14 0 chrX 115909548 115910178 -50740118 + L1_Mur1 LINE L1 750 1391 -4495 4 1469 1789 172 0 31 chrX 115910175 115910535 -50739761 + L1_Mur1 LINE L1 1685 2033 -3853 4 1469 535 234 0 0 chrX 115910545 115910669 -50739627 + L1_Mur1 LINE L1 2947 3070 -2816 4 1469 254 89 0 0 chrX 115910671 115910716 -50739580 + Lx LINE L1 6598 6642 -12 4 1469 639 292 63 14 chrX 115910761 115911046 -50739250 + RMER17C LTR ERVK 112 410 0 4 1469 336 366 78 60 chrX 115911189 115911429 -50738867 + MLT2D LTR ERVL 7 258 -156 4 1469 919 113 0 39 chrX 115911429 115911585 -50738711 + L1_Mus1 LINE L1 6417 6566 -1 4 1469 336 366 78 60 chrX 115911585 115911626 -50738670 + MLT2D LTR ERVL 259 293 -121 4 1469 349 364 63 63 chrX 115911898 115912197 -50738099 + MER82 DNA MER2_type 300 598 -55 4 1469 221 57 29 0 chrX 115912569 115912604 -50737692 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 1469 663 161 0 0 chrX 115912781 115912961 -50737335 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1469 886 241 11 49 chrX 115912979 115913263 -50737033 - BGLII_B LTR ERVK -164 277 5 4 1469 752 187 63 151 chrX 115913437 115913689 -50736607 - RMER1C Other Other -2 1340 1111 4 1469 494 272 34 13 chrX 115913724 115913873 -50736423 + MTD LTR MaLR 268 419 0 4 1469 443 308 41 14 chrX 115913968 115914113 -50736183 + B1F SINE Alu 1 149 0 4 1469 195 190 0 0 chrX 115914784 115914842 -50735454 + GA-rich Low_complexity Low_complexity 1 58 0 4 1469 268 345 93 60 chrX 115914934 115915150 -50735146 - B4 SINE B4 -60 232 10 4 1469 763 309 17 0 chrX 115915399 115915687 -50734609 - L1MA5 LINE L1 -462 5838 5546 4 1469 343 281 0 0 chrX 115915937 115916019 -50734277 - Lx9 LINE L1 -821 6823 6742 4 1469 431 297 94 33 chrX 115916131 115916619 -50733677 - L1_Mur3 LINE L1 -1291 4586 4076 5 1469 238 309 125 9 chrX 115916959 115917191 -50733105 - L1_Mur3 LINE L1 -1821 4059 3801 5 1469 1454 306 12 59 chrX 115917211 115917988 -50732308 - L1MA5 LINE L1 -2260 3883 3144 4 1469 30 45 0 0 chrX 115918387 115918431 -50731865 + AT_rich Low_complexity Low_complexity 1 44 0 5 1469 246 265 73 0 chrX 115918833 115918901 -50731395 - MTE2a LTR MaLR -18 361 289 5 1469 1136 189 22 0 chrX 115919059 115919287 -50731009 - Lx2 LINE L1 0 6997 6765 5 1469 700 171 0 0 chrX 115919287 115919398 -50730898 - Lx2 LINE L1 -363 6634 6524 5 1469 276 30 0 0 chrX 115919444 115919477 -50730819 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 1469 236 265 14 29 chrX 115919485 115919555 -50730741 + (TATG)n Simple_repeat Simple_repeat 3 71 0 5 1469 24 0 0 0 chrX 115919728 115919752 -50730544 + AT_rich Low_complexity Low_complexity 1 24 0 5 1469 1503 69 0 2 chrX 115919763 115919964 -50730332 - L1_Mus1 LINE L1 -168 6399 6216 5 1469 855 348 58 22 chrX 115920039 115920538 -50729758 - Lx8 LINE L1 -233 7240 6724 5 1469 553 293 148 9 chrX 115920559 115920769 -50729527 - B4A SINE B4 -50 242 4 5 1469 322 368 95 40 chrX 115921117 115921369 -50728927 - LTR48B LTR ERV1 -378 266 1 5 1469 829 70 15 15 chrX 115922328 115922458 -50727838 + (GAAA)n Simple_repeat Simple_repeat 2 131 0 5 1469 416 344 38 31 chrX 115922492 115922636 -50727660 + RSINE1 SINE B4 1 147 -18 5 1469 477 0 0 0 chrX 115922636 115922689 -50727607 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1469 416 344 38 31 chrX 115922689 115922703 -50727593 + RSINE1 SINE B4 148 160 -5 5 1469 798 254 7 43 chrX 115922744 115922960 -50727336 + B3 SINE B2 4 213 -3 5 1469 1118 60 0 13 chrX 115923023 115923175 -50727121 + L1_Mm LINE L1 5130 5279 -604 5 1469 32 0 0 0 chrX 115923711 115923743 -50726553 + AT_rich Low_complexity Low_complexity 1 32 0 5 1469 204 67 0 0 chrX 115924293 115924323 -50725973 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 5 1469 214 136 48 48 chrX 115925222 115925284 -50725012 + T-rich Low_complexity Low_complexity 2 63 0 5 1469 580 298 118 24 chrX 115925347 115925818 -50724478 + LTR48 LTR ERV1 3 713 -74 5 1469 184 304 72 0 chrX 115926130 115926199 -50724097 - L2c LINE L2 -54 3333 3260 5 1469 572 0 0 14 chrX 115927622 115927691 -50722605 + (TAAAA)n Simple_repeat Simple_repeat 4 71 0 5 1469 851 326 126 24 chrX 115927696 115928149 -50722147 - LTR40a LTR ERVL -20 499 1 5 1469 224 103 71 29 chrX 115928351 115928421 -50721875 + (TTATA)n Simple_repeat Simple_repeat 1 73 0 5 1469 280 270 13 13 chrX 115928753 115928828 -50721468 - B4 SINE B4 -207 85 11 5 1469 381 312 97 29 chrX 115928846 115929084 -50721212 - L1M4 LINE L1 -845 5514 5261 5 1469 21 71 0 0 chrX 115929514 115929556 -50720740 + AT_rich Low_complexity Low_complexity 1 42 0 5 1469 1382 252 16 73 chrX 115929561 115929780 -50720516 - MTC LTR MaLR 0 421 211 5 1469 540 0 0 0 chrX 115929780 115929840 -50720456 + (TC)n Simple_repeat Simple_repeat 2 61 0 5 1469 1382 252 16 73 chrX 115929840 115930005 -50720291 - MTC LTR MaLR -211 210 59 5 1469 266 311 117 32 chrX 115930310 115930559 -50719737 - L1M4 LINE L1 -3206 2940 2671 5 1469 630 144 8 31 chrX 115930760 115930889 -50719407 + ORR1B2 LTR MaLR 1 126 -241 5 1469 1561 197 44 57 chrX 115930901 115931284 -50719012 + ORR1B2 LTR MaLR 1 378 0 5 1469 799 271 64 56 chrX 115931614 115931880 -50718416 - MTD LTR MaLR 0 419 152 5 1469 22 0 0 0 chrX 115931975 115931997 -50718299 + AT_rich Low_complexity Low_complexity 1 22 0 5 1469 1070 157 0 16 chrX 115932156 115932350 -50717946 + B2_Mm2 SINE B2 2 192 -3 5 1469 27 0 0 0 chrX 115932494 115932521 -50717775 + AT_rich Low_complexity Low_complexity 1 27 0 5 1469 248 393 34 20 chrX 115932766 115932914 -50717382 + RMER12 LTR ERVK 721 870 -452 5 1469 21 0 0 0 chrX 115932996 115933017 -50717279 + AT_rich Low_complexity Low_complexity 1 21 0 5 1469 451 341 101 56 chrX 115933412 115933482 -50716814 - RMER15 LTR ERVL 0 575 501 5 1469 441 0 0 0 chrX 115933482 115933531 -50716765 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 5 1469 451 341 101 56 chrX 115933531 115933746 -50716550 - RMER15 LTR ERVL -75 500 278 5 1469 552 100 0 0 chrX 115934600 115934680 -50715616 + (TA)n Simple_repeat Simple_repeat 2 81 0 5 1469 26 82 0 0 chrX 115934704 115934765 -50715531 + AT_rich Low_complexity Low_complexity 1 61 0 5 1469 381 58 0 0 chrX 115934799 115934851 -50715445 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 5 1469 5002 212 35 4 chrX 115934907 115936003 -50714293 - Lx3C LINE L1 -20 6956 5827 5 1469 7050 89 6 0 chrX 115936005 115937120 -50713176 - L1Md_F2 LINE L1 -12 6570 5447 5 1469 464 167 0 0 chrX 115937116 115937200 -50713096 - Lx3C LINE L1 -1144 5832 5749 5 1469 8486 173 184 7 chrX 115937207 115940533 -50709763 - L1_Mus2 LINE L1 0 6566 2585 5 1469 2411 70 6 0 chrX 115940532 115940847 -50709449 - L1_Mm LINE L1 -24 5859 5543 5 1469 3314 182 133 23 chrX 115940843 115941640 -50708656 - Lx3C LINE L1 -520 5366 4482 5 1469 36 40 0 0 chrX 115941975 115942025 -50708271 + AT_rich Low_complexity Low_complexity 1 50 0 5 1469 375 303 60 25 chrX 115942586 115942870 -50707426 + L1M3 LINE L1 3471 3764 -2376 5 1469 463 288 63 16 chrX 115942930 115943057 -50707239 + ETnERV2-int LTR ERVK 7070 7202 -204 5 1469 391 354 25 19 chrX 115943440 115943601 -50706695 + B3 SINE B2 50 211 -5 5 1469 861 280 62 42 chrX 115943731 115944189 -50706107 - RMER20B LTR ERVK -29 487 32 5 1469 1599 207 19 38 chrX 115944189 115944308 -50705988 + Lx6 LINE L1 5468 5586 -297 5 1469 8024 49 2 1 chrX 115944308 115945305 -50704991 + L1Md_F3 LINE L1 5587 6584 0 5 1469 4078 247 41 34 chrX 115945305 115946503 -50703793 + Lx6 LINE L1 5587 6794 -666 5 1469 430 232 0 0 chrX 115946504 115946586 -50703710 - B2_Mm2 SINE B2 -112 83 2 5 1469 516 238 0 50 chrX 115946587 115946746 -50703550 + Lx6 LINE L1 7308 7458 -2 5 1469 269 282 56 0 chrX 115946777 115946848 -50703448 + ID2 SINE ID 9 83 0 5 1469 386 20 20 0 chrX 115947336 115947387 -50702909 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1469 3309 79 4 0 chrX 115947620 115948074 -50702222 + L1_Mur1 LINE L1 5103 5558 -328 5 1469 1232 135 5 5 chrX 115948071 115948272 -50702024 + Lx3A LINE L1 6130 6330 -679 5 1469 2681 72 0 0 chrX 115948272 115948620 -50701676 + L1Md_F2 LINE L1 6223 6570 -12 5 1469 189 0 0 0 chrX 115948646 115948667 -50701629 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1469 4285 134 6 1 chrX 115948668 115949346 -50700950 + Lx3A LINE L1 6299 6979 -2 5 1469 806 102 8 8 chrX 115949954 115950082 -50700214 - L1VL4 LINE L1 -5471 831 704 5 1469 264 177 36 0 chrX 115950105 115950172 -50700124 - Lx2 LINE L1 -168 6829 6786 5 1469 36542 30 0 7 chrX 115950232 115955219 -50695077 + L1Md_T LINE L1 643 5586 -297 5 1469 8292 38 0 0 chrX 115955219 115956215 -50694081 + L1Md_T LINE L1 5587 6582 0 5 1469 387 0 0 0 chrX 115956291 115956334 -50693962 + (TAA)n Simple_repeat Simple_repeat 2 44 0 5 1469 1180 247 235 38 chrX 115956358 115956501 -50693795 - L1VL2 LINE L1 -5551 784 641 5 1469 795 21 0 0 chrX 115956501 115956594 -50693702 + (TTC)n Simple_repeat Simple_repeat 2 94 0 5 1469 1008 97 0 0 chrX 115956595 115956729 -50693567 - B1_Mus1 SINE Alu -14 134 1 5 1469 1180 247 235 38 chrX 115956729 115957184 -50693112 - L1VL2 LINE L1 -5695 640 66 5 1469 1029 234 191 69 chrX 115957197 115957573 -50692723 - MT2A LTR ERVL -111 422 1 5 1469 344 321 99 88 chrX 115957629 115958254 -50692042 + L1MB3 LINE L1 5500 6131 -52 5 1469 25 0 0 0 chrX 115959127 115959152 -50691144 + AT_rich Low_complexity Low_complexity 1 25 0 5 1469 180 111 0 0 chrX 115959717 115959744 -50690552 + (TTG)n Simple_repeat Simple_repeat 1 27 0 5 1469 936 65 0 0 chrX 115960388 115960512 -50689784 + (TATATG)n Simple_repeat Simple_repeat 2 125 0 5 1469 1040 325 14 5 chrX 115960664 115961032 -50689264 + Lx8 LINE L1 6651 7021 -452 5 1469 324 248 72 36 chrX 115961048 115961186 -50689110 - MTD LTR MaLR -14 405 263 5 1469 807 290 95 65 chrX 115961363 115961795 -50688501 + Lx8 LINE L1 7029 7473 0 5 1469 447 19 0 0 chrX 115961889 115961941 -50688355 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1469 746 101 0 0 chrX 115961944 115962053 -50688243 + L1_Mus1 LINE L1 5289 5397 -486 5 1469 184 120 20 20 chrX 115962149 115962200 -50688096 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1469 3825 92 2 4 chrX 115962669 115963204 -50687092 + L1_Mm LINE L1 5232 5765 -118 5 1469 6460 112 5 1 chrX 115963201 115964126 -50686170 + L1_Mus1 LINE L1 5638 6566 -1 5 1469 375 325 64 53 chrX 115964155 115964421 -50685875 + Lx9 LINE L1 5655 5923 -1721 5 1469 2518 210 22 36 chrX 115964470 115965023 -50685273 + L1VL4 LINE L1 244 788 -5514 5 1469 20863 206 21 7 chrX 115965016 115967643 -50682653 + Lx2 LINE L1 1203 3857 -2029 5 1469 207 0 0 0 chrX 115967643 115967666 -50682630 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1469 20863 185 28 4 chrX 115967666 115970607 -50679689 + Lx2 LINE L1 3858 6876 -121 5 1469 1460 265 31 14 chrX 115970615 115970975 -50679321 - ORR1D1 LTR MaLR -8 366 1 5 1469 243 306 23 53 chrX 115970981 115971112 -50679184 + Lx8 LINE L1 6494 6620 -853 5 1469 2284 106 36 3 chrX 115971122 115971482 -50678814 - MTB LTR MaLR -5 395 24 5 1469 694 356 37 44 chrX 115971478 115971825 -50678471 - MTE2a LTR MaLR -6 373 21 5 1469 885 302 75 92 chrX 115971873 115972376 -50677920 + Lx8 LINE L1 6627 7121 -352 5 1469 599 352 0 19 chrX 115972578 115972740 -50677556 - RSINE1 SINE B4 -6 159 1 5 1469 354 256 51 0 chrX 115972754 115972891 -50677405 - Lx9 LINE L1 -10 7634 7491 5 1469 1407 240 18 14 chrX 115974394 115974954 -50675342 + L1_Rod LINE L1 1022 1587 -4260 5 1469 244 290 95 14 chrX 115975240 115975387 -50674909 - L1MB5 LINE L1 -191 5983 5825 5 1469 250 378 0 11 chrX 115975556 115975647 -50674649 + PB1D10 SINE Alu 21 110 -7 5 1469 678 220 0 7 chrX 115975931 115976082 -50674214 - Lx2B LINE L1 -5 6995 6846 5 1469 32 0 0 0 chrX 115976317 115976349 -50673947 + AT_rich Low_complexity Low_complexity 1 32 0 5 1469 377 305 36 21 chrX 115976806 115976956 -50673340 - L1MB5 LINE L1 -527 5657 5497 5 1469 1127 250 76 35 chrX 115977046 115977415 -50672881 - ORR1C2 LTR MaLR 0 384 1 5 1469 462 374 16 13 chrX 115977632 115977846 -50672450 - B3A SINE B2 -6 210 1 5 1469 864 276 23 0 chrX 115978044 115978258 -50672038 - MTD LTR MaLR -2 417 199 5 1469 189 107 0 0 chrX 115978260 115978288 -50672008 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1469 21391 180 21 11 chrX 115978296 115980811 -50669485 - Lx LINE L1 -7 6647 4118 5 1469 243 0 0 0 chrX 115980811 115980838 -50669458 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1469 21391 182 29 12 chrX 115980838 115984284 -50666012 - Lx LINE L1 -1769 4117 604 5 1469 507 314 45 62 chrX 115984284 115984328 -50665968 - MTD LTR MaLR -164 255 209 5 1469 1462 68 0 20 chrX 115984328 115984523 -50665773 - B2_Mm1t SINE B2 -2 191 1 6 1469 507 314 45 62 chrX 115984523 115984702 -50665594 - MTD LTR MaLR -211 208 36 5 1469 1099 316 75 29 chrX 115984712 115985233 -50665063 - Lx8 LINE L1 -102 7371 6827 6 1469 490 75 0 24 chrX 115985237 115985319 -50664977 + (TA)n Simple_repeat Simple_repeat 2 81 0 6 1469 180 77 0 0 chrX 115985852 115985878 -50664418 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 6 1469 1874 230 3 3 chrX 115985916 115986308 -50663988 - ORR1B1 LTR MaLR 0 394 3 6 1469 853 283 80 38 chrX 115987181 115987492 -50662804 + MTD LTR MaLR 2 310 -90 6 1469 3614 67 19 0 chrX 115987507 115987973 -50662323 + MT2C_Mm LTR ERVL 1 475 0 6 1469 212 167 0 0 chrX 115988009 115988051 -50662245 + A-rich Low_complexity Low_complexity 2 43 0 6 1469 300 295 0 0 chrX 115988673 115988768 -50661528 + L1_Mm LINE L1 5477 5571 -312 6 1469 856 317 41 31 chrX 115988761 115989370 -50660926 - Lx8 LINE L1 -1305 6168 5587 6 1469 1859 267 76 13 chrX 115989447 115989998 -50660298 - Lx6 LINE L1 -1 7459 6874 6 1469 2101 206 98 6 chrX 115990002 115990534 -50659762 - L1VL4 LINE L1 -159 5721 5141 6 1469 348 192 0 0 chrX 115990537 115990610 -50659686 - L1VL4 LINE L1 -1361 4516 4444 6 1469 3227 184 15 71 chrX 115990610 115991290 -50659006 + RLTR26 LTR ERVK 1 642 0 6 1469 1051 152 117 9 chrX 115991290 115991503 -50658793 - L1VL4 LINE L1 -1428 4449 4214 6 1469 837 193 0 6 chrX 115991511 115991688 -50658608 + L1_Mur3 LINE L1 4933 5108 -772 6 1469 1213 162 22 13 chrX 115991685 115991917 -50658379 - L1_Mur1 LINE L1 -806 5080 4847 6 1469 6516 130 5 10 chrX 115991912 115991945 -50658351 - Lx LINE L1 -5 6649 6617 6 1469 5972 35 4 4 chrX 115991945 115992667 -50657629 + L1Md_F3 LINE L1 5862 6583 -1 6 1469 6516 130 5 10 chrX 115992667 115993645 -50656651 - Lx LINE L1 -38 6616 5645 6 1469 3696 201 14 40 chrX 115993694 115994494 -50655802 - RMER13B LTR ERVK -129 779 1 6 1469 452 130 0 0 chrX 115994494 115994586 -50655710 - Lx LINE L1 -1001 5653 5556 6 1469 312 119 75 0 chrX 115994575 115994642 -50655654 - L1VL4 LINE L1 -1709 4168 4097 6 1469 566 218 0 0 chrX 115994626 115994750 -50655546 - L1_Mur2 LINE L1 -1546 4331 4208 6 1469 9488 199 56 59 chrX 115994744 115995270 -50655026 - L1VL4 LINE L1 -1980 3906 3350 6 1469 304 0 89 0 chrX 115995270 115995326 -50654970 + (TTTTG)n Simple_repeat Simple_repeat 1 61 0 6 1469 9488 186 55 60 chrX 115995326 115997615 -50652681 - L1VL4 LINE L1 -2537 3349 1116 6 1469 197 77 0 49 chrX 115997615 115997656 -50652640 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 6 1469 21 36 0 0 chrX 115997656 115997684 -50652612 + AT_rich Low_complexity Low_complexity 1 28 0 6 1469 38 39 0 0 chrX 115997741 115997793 -50652503 + AT_rich Low_complexity Low_complexity 1 52 0 6 1469 252 86 0 0 chrX 115998252 115998287 -50652009 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 6 183 5884 120 8 55 chrX 115998305 115999311 -50650985 - Lx3_Mus LINE L1 0 7009 6051 6 1470 455 45 0 0 chrX 115999312 115999379 -50650917 - MusHAL1 LINE L1 -1895 817 751 6 1470 564 102 0 0 chrX 115999379 115999477 -50650819 + (TTTC)n Simple_repeat Simple_repeat 4 101 0 6 1470 2728 146 56 15 chrX 115999478 116000000 -50650296 - L1VL2 LINE L1 -5384 951 409 6 1470 1325 262 67 37 chrX 116000004 116000629 -50649667 - L1VL2 LINE L1 -5812 523 66 1 1470 2225 138 49 0 chrX 116000645 116000864 -50649432 - L1_Mur1 LINE L1 -1015 4871 4643 2 1470 189 0 0 0 chrX 116000864 116000885 -50649411 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 3 1470 2225 138 49 0 chrX 116000885 116001093 -50649203 - L1_Mur1 LINE L1 -1244 4642 4424 2 1470 360 167 0 0 chrX 116001538 116001634 -50648662 + T-rich Low_complexity Low_complexity 1 96 0 4 1470 768 277 249 32 chrX 116001955 116002332 -50647964 - Lx6 LINE L1 -8 7452 6994 5 1470 836 275 35 60 chrX 116002362 116002730 -50647566 - RLTR10D LTR ERVK 0 359 1 6 1470 1412 174 14 28 chrX 116002730 116003014 -50647282 - IAP-d-int LTR ERVK 0 6542 6263 6 1470 704 231 6 0 chrX 116003081 116003254 -50647042 - IAP-d-int LTR ERVK -459 6083 5910 6 1470 1487 258 8 8 chrX 116003272 116003671 -50646625 - IAP-d-int LTR ERVK -742 5800 5402 6 1470 2395 281 20 19 chrX 116003718 116004578 -50645718 - IAP-d-int LTR ERVK -1148 5394 4534 6 1470 2666 282 23 26 chrX 116004658 116004826 -50645470 - IAP-d-int LTR ERVK -3042 3500 3322 6 1470 3928 53 0 0 chrX 116004826 116005312 -50644984 + L1Md_F3 LINE L1 6085 6570 -14 7 1470 2666 282 23 26 chrX 116005312 116006172 -50644124 - IAP-d-int LTR ERVK -3221 3321 2475 6 1470 3449 264 30 3 chrX 116006170 116007187 -50643109 - IAP-d-int LTR ERVK -5477 1065 22 6 1470 904 279 53 45 chrX 116007234 116007590 -50642706 - RLTR10D LTR ERVK 0 359 1 6 1470 1839 287 78 56 chrX 116007590 116008362 -50641934 - Lx6 LINE L1 -491 6969 6181 5 1470 2088 244 67 61 chrX 116008362 116008769 -50641527 - RMER19A LTR ERVK 0 737 324 8 1470 4261 81 8 14 chrX 116008769 116009361 -50640935 - L1_Mus1 LINE L1 0 6567 5979 9 1470 2088 245 64 58 chrX 116009361 116009591 -50640705 - RMER19A LTR ERVK -414 323 67 8 1470 14946 145 104 13 chrX 116009694 116011798 -50638498 - L1_Mus1 LINE L1 0 6567 4498 1 1470 1013 110 7 0 chrX 116011798 116011944 -50638352 + B1_Mm SINE Alu 1 147 0 1 1470 14946 159 167 32 chrX 116011944 116014751 -50635545 - L1_Mus1 LINE L1 -1380 4497 1005 1 1470 20248 9 0 0 chrX 116014746 116017158 -50633138 + L1Md_A LINE L1 3175 5586 -297 1 1470 8899 11 0 0 chrX 116017158 116018154 -50632142 + L1Md_A LINE L1 5587 6582 0 1 1470 32879 41 15 13 chrX 116018176 116022591 -50627705 + L1Md_A LINE L1 440 4921 -962 1 1470 234 183 46 77 chrX 116022591 116022656 -50627640 - RMER20A LTR ERVK -268 248 186 1 1470 32879 41 15 13 chrX 116022656 116023310 -50626986 + L1Md_A LINE L1 4922 5586 -297 1 1470 8093 50 1 0 chrX 116023310 116024305 -50625991 + L1Md_T LINE L1 5587 6582 0 1 1470 2478 137 33 6 chrX 116024309 116024434 -50625862 - MusHAL1 LINE L1 -301 2411 2274 1 1470 570 67 0 0 chrX 116024434 116024509 -50625787 + (TTC)n Simple_repeat Simple_repeat 2 76 0 1 1470 2478 137 33 6 chrX 116024509 116024867 -50625429 - MusHAL1 LINE L1 -439 2273 1915 1 1470 285 200 0 0 chrX 116025004 116025054 -50625242 - RMER6C LTR ERVK -6 714 665 1 1470 1654 230 149 73 chrX 116025178 116025784 -50624512 - RMER6C LTR ERVK -38 652 2 1 1470 459 333 86 16 chrX 116025928 116026242 -50624054 + MER92B LTR ERV1 156 491 -145 1 1470 858 191 37 16 chrX 116026245 116026490 -50623806 + Lx2B LINE L1 5973 6222 -778 2 1470 4025 201 48 66 chrX 116026495 116027407 -50622889 - RMER19B LTR ERVK -6 896 1 2 1470 2341 266 43 4 chrX 116027407 116028132 -50622164 + Lx2B LINE L1 6217 7038 -20 2 1470 22 56 0 0 chrX 116028133 116028169 -50622127 + AT_rich Low_complexity Low_complexity 1 36 0 2 1470 451 283 25 0 chrX 116028929 116029049 -50621247 + B1_Mur1 SINE Alu 5 127 -22 2 1470 281 325 152 16 chrX 116029108 116029233 -50621063 - B3 SINE B2 -70 146 5 2 1470 1491 225 68 3 chrX 116030657 116031027 -50619269 + ORR1B1 LTR MaLR 1 394 0 2 1470 542 311 65 16 chrX 116031086 116031272 -50619024 + B3A SINE B2 1 195 -3 2 1470 241 192 50 3 chrX 116031508 116031583 -50618713 - L1MA5 LINE L1 -6 6294 6218 2 1470 971 259 95 72 chrX 116031583 116031932 -50618364 - MTD LTR MaLR 0 419 63 2 1470 1383 263 83 104 chrX 116031932 116032255 -50618041 + RMER6D LTR ERVK 1 346 -374 2 1470 219 133 0 0 chrX 116032255 116032300 -50617996 + (CAGTT)n Simple_repeat Simple_repeat 4 48 0 3 1470 1383 263 83 104 chrX 116032300 116032361 -50617935 + RMER6D LTR ERVK 347 404 -316 2 1470 1636 188 41 83 chrX 116032361 116032772 -50617524 + ORR1B1 LTR MaLR 1 394 0 3 1470 1383 263 83 104 chrX 116032772 116033099 -50617197 + RMER6D LTR ERVK 405 698 -22 2 1470 1398 84 64 0 chrX 116033304 116033540 -50616756 - L1Md_F2 LINE L1 0 6582 6348 3 1470 428 124 0 63 chrX 116034166 116034261 -50616035 + L1Md_F2 LINE L1 6492 6580 -2 3 1470 208 250 25 12 chrX 116034356 116034437 -50615859 + T-rich Low_complexity Low_complexity 2 83 0 3 1470 52 17 0 0 chrX 116034726 116034785 -50615511 + AT_rich Low_complexity Low_complexity 1 59 0 3 1470 225 65 0 0 chrX 116034789 116034820 -50615476 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1470 6533 104 2 1 chrX 116034826 116035953 -50614343 - L1_Mus1 LINE L1 -1 6566 5439 3 1470 4938 28 0 0 chrX 116035952 116036563 -50613733 + L1Md_F2 LINE L1 4976 5586 -297 3 1470 7853 57 1 11 chrX 116036563 116037569 -50612727 + L1Md_F2 LINE L1 5587 6582 0 3 1470 14629 114 129 106 chrX 116037596 116042680 -50607616 - L1_Mus1 LINE L1 -447 5436 234 3 1470 1197 262 67 42 chrX 116042819 116043114 -50607182 - RMER5 LTR ERV1 -10 524 231 3 1470 3857 117 28 23 chrX 116043114 116043718 -50606578 + Lx LINE L1 6048 6654 0 4 1470 1197 262 67 42 chrX 116043718 116043828 -50606468 - RMER5 LTR ERV1 -304 230 109 3 1470 1074 279 21 21 chrX 116043954 116044328 -50605968 + ORR1D1 LTR MaLR 1 374 0 4 1470 282 337 10 0 chrX 116044470 116044568 -50605728 - MTEa LTR MaLR -3 376 278 4 1470 304 331 66 7 chrX 116044747 116044884 -50605412 + MLT1B LTR MaLR 8 152 -238 4 1470 912 19 0 0 chrX 116045280 116045386 -50604910 + (TC)n Simple_repeat Simple_repeat 1 106 0 4 1470 325 292 41 10 chrX 116045387 116045484 -50604812 - B1_Mur2 SINE Alu -4 145 46 4 1470 3683 141 37 84 chrX 116045484 116045792 -50604504 - RMER17A LTR ERVK 0 751 433 4 1470 3358 56 5 5 chrX 116045792 116046224 -50604072 - L1Md_F2 LINE L1 0 6582 6151 4 1470 3683 141 37 84 chrX 116046224 116046703 -50603593 - RMER17A LTR ERVK -319 432 1 4 1470 263 340 144 0 chrX 116047191 116047288 -50603008 - MTEa LTR MaLR -94 306 196 4 1470 28711 95 18 20 chrX 116047441 116052540 -50597756 + L1Md_F2 LINE L1 506 5585 -298 4 1470 7604 71 0 1 chrX 116052541 116053526 -50596770 + L1Md_F2 LINE L1 5587 6570 -12 4 1470 252 59 0 0 chrX 116053822 116053856 -50596440 + (T)n Simple_repeat Simple_repeat 1 34 0 4 1470 1016 129 0 0 chrX 116053873 116054020 -50596276 - B1_Mus1 SINE Alu 0 148 2 5 1470 600 115 25 0 chrX 116054107 116054229 -50596067 + (TAGA)n Simple_repeat Simple_repeat 3 127 0 5 1470 365 312 161 6 chrX 116054240 116054401 -50595895 - ID_B1 SINE B4 -33 191 6 5 1470 21 57 0 0 chrX 116054619 116054654 -50595642 + AT_rich Low_complexity Low_complexity 1 35 0 5 1470 25 31 0 0 chrX 116054726 116054758 -50595538 + AT_rich Low_complexity Low_complexity 1 32 0 5 1470 4506 104 72 10 chrX 116054758 116055455 -50594841 - L1_Mus2 LINE L1 0 6566 5827 5 1470 1361 58 6 22 chrX 116055455 116055633 -50594663 + B2_Mm1a SINE B2 3 177 -16 5 1470 34929 48 1 4 chrX 116055634 116060972 -50589324 + L1Md_T LINE L1 171 5589 -297 5 1470 8289 37 1 0 chrX 116060972 116061966 -50588330 + L1Md_T LINE L1 5590 6584 -1 5 1470 19190 130 9 2 chrX 116061986 116063078 -50587218 - L1_Mm LINE L1 -42 5841 4738 5 1470 315 0 0 0 chrX 116063078 116063113 -50587183 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 5 1470 19190 130 9 2 chrX 116063113 116065132 -50585164 - L1_Mm LINE L1 -1146 4737 2711 5 1470 2365 210 34 92 chrX 116065120 116066678 -50583618 - L1VL4 LINE L1 -2382 1316 2 6 1470 6237 179 9 12 chrX 116066795 116068001 -50582295 + Lx2 LINE L1 5793 6995 -2 6 1470 29 47 0 0 chrX 116068061 116068104 -50582192 + AT_rich Low_complexity Low_complexity 1 43 0 6 1470 266 333 0 0 chrX 116068390 116068459 -50581837 + RSINE1 SINE B4 96 164 -1 6 1470 28 0 0 0 chrX 116068609 116068637 -50581659 + AT_rich Low_complexity Low_complexity 1 28 0 6 1470 1531 138 142 0 chrX 116068748 116069009 -50581287 + Lx2 LINE L1 6697 6994 -3 6 1470 375 314 78 10 chrX 116069261 116069454 -50580842 - MLT2B4 LTR ERVL -346 210 5 6 1470 322 333 64 11 chrX 116069758 116069946 -50580350 - ERVL-B4-int LTR ERVL -377 5337 5140 6 1470 1424 256 69 6 chrX 116069974 116070335 -50579961 + MTD LTR MaLR 13 396 -23 6 1470 1076 29 0 7 chrX 116070335 116070472 -50579824 + (CAAAC)n Simple_repeat Simple_repeat 2 137 0 6 1470 228 100 0 0 chrX 116070473 116070513 -50579783 + (CCAA)n Simple_repeat Simple_repeat 4 43 0 7 1470 288 0 0 0 chrX 116070899 116070931 -50579365 + (A)n Simple_repeat Simple_repeat 1 32 0 7 1470 804 345 41 38 chrX 116071068 116071436 -50578860 + MTEa LTR MaLR 11 379 0 7 1470 392 327 32 14 chrX 116071512 116071732 -50578564 - ERVL-B4-int LTR ERVL -1638 4076 3853 6 1470 31 26 0 0 chrX 116071876 116071914 -50578382 + AT_rich Low_complexity Low_complexity 1 38 0 7 1470 23 0 0 0 chrX 116072416 116072439 -50577857 + AT_rich Low_complexity Low_complexity 1 23 0 7 1470 613 322 32 11 chrX 116073054 116073242 -50577054 + B3 SINE B2 19 210 -6 7 1470 248 374 41 41 chrX 116073459 116073604 -50576692 - MLT2B1 LTR ERVL -73 494 350 7 1470 249 83 0 0 chrX 116073720 116073756 -50576540 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1470 467 271 94 24 chrX 116073961 116074131 -50576165 - MER58C DNA MER1_type -13 202 21 7 1470 192 148 0 47 chrX 116074941 116075005 -50575291 + (TA)n Simple_repeat Simple_repeat 2 62 0 7 1470 195 232 0 0 chrX 116075005 116075061 -50575235 + (TG)n Simple_repeat Simple_repeat 1 56 0 8 1470 709 241 0 0 chrX 116075170 116075303 -50574993 + B1_Mur2 SINE Alu 3 135 -14 8 1470 1128 88 0 0 chrX 116075373 116075521 -50574775 + B1_Mus1 SINE Alu 1 148 0 8 1470 270 73 0 0 chrX 116075521 116075562 -50574734 + (A)n Simple_repeat Simple_repeat 1 41 0 8 1470 8369 38 3 2 chrX 116075618 116077106 -50573190 - L1Md_F2 LINE L1 -3 6579 5090 8 1470 605 152 7 0 chrX 116077106 116077244 -50573052 + CT-rich Low_complexity Low_complexity 2 140 0 8 1470 201 94 0 0 chrX 116077244 116077276 -50573020 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 1470 230 278 0 0 chrX 116077279 116077333 -50572963 + GA-rich Low_complexity Low_complexity 1 54 0 8 1470 180 158 0 0 chrX 116077525 116077563 -50572733 + A-rich Low_complexity Low_complexity 1 38 0 8 1470 4581 153 32 6 chrX 116077632 116078705 -50571591 - Lx2 LINE L1 -609 6388 5290 8 1470 4617 118 20 18 chrX 116078718 116078734 -50571562 - Lx3_Mus LINE L1 -12 6997 6987 9 1470 324 0 0 0 chrX 116078734 116078770 -50571526 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 9 1470 4617 118 20 18 chrX 116078770 116079159 -50571137 - Lx3_Mus LINE L1 -23 6986 6599 9 1470 3940 26 51 0 chrX 116079159 116079628 -50570668 - MT2_Mm LTR ERVL 0 493 1 9 1470 4617 118 20 18 chrX 116079628 116079960 -50570336 - Lx3_Mus LINE L1 -411 6598 6257 9 1470 1777 116 4 11 chrX 116079961 116080231 -50570065 - Lx3_Mus LINE L1 -101 6908 6641 9 1470 15463 116 7 9 chrX 116080200 116082970 -50567326 - Lx3_Mus LINE L1 -755 6254 3494 9 1470 2103 139 18 18 chrX 116082976 116083357 -50566939 - Lx3_Mus LINE L1 -2965 2921 2541 9 1470 500 70 0 0 chrX 116083352 116083423 -50566873 + Lx3_Mus LINE L1 2452 2522 -3364 9 1470 558 92 3 5 chrX 116083424 116083518 -50566778 + ORR1A2 LTR MaLR 173 265 -61 9 1470 1790 159 3 0 chrX 116083523 116083838 -50566458 - L1_Mur1 LINE L1 -576 5310 4995 9 1470 3360 167 28 8 chrX 116083838 116084442 -50565854 + Lx2 LINE L1 6382 6997 0 9 1470 925 342 27 62 chrX 116085406 116085958 -50564338 + Lx8 LINE L1 6614 7146 -327 9 1470 435 319 22 15 chrX 116086106 116086243 -50564053 + Lx8 LINE L1 7193 7330 -143 9 1470 438 330 62 47 chrX 116086376 116086827 -50563469 + L1MC3 LINE L1 5350 5807 -1978 9 1470 31741 88 9 10 chrX 116086879 116093068 -50557228 - L1Md_F2 LINE L1 -12 6570 392 9 1470 365 260 0 28 chrX 116094381 116094488 -50555808 + MTEb LTR MaLR 272 375 -4 1 1470 429 20 0 0 chrX 116095248 116095298 -50554998 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 1470 1618 194 58 83 chrX 116095409 116095807 -50554489 - ORR1B1 LTR MaLR 0 394 7 1 1470 692 318 39 2 chrX 116096007 116096373 -50553923 + L1MC3 LINE L1 6246 6639 -1356 9 1470 492 18 0 0 chrX 116096397 116096454 -50553842 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1470 1756 122 60 41 chrX 116096457 116096773 -50553523 - Lx3A LINE L1 -11 6970 6649 1 1470 270 256 47 0 chrX 116097143 116097229 -50553067 + L1MC3 LINE L1 6351 6440 -1345 1 1470 1938 204 0 10 chrX 116097237 116097621 -50552675 - L1_Mur2 LINE L1 -661 5216 4835 1 1470 3366 130 0 0 chrX 116097621 116098121 -50552175 + L1_Mus4 LINE L1 6130 6629 -7 1 1470 1938 204 0 10 chrX 116098121 116098136 -50552160 - L1_Mur2 LINE L1 -1043 4834 4822 1 1470 247 379 13 19 chrX 116099682 116099838 -50550458 - MLT1A0 LTR MaLR -116 511 357 1 1470 207 0 0 0 chrX 116101113 116101136 -50549160 + (CTTTA)n Simple_repeat Simple_repeat 2 24 0 1 1470 2448 249 18 7 chrX 116101137 116101688 -50548608 - Lx5 LINE L1 -26 7024 6468 1 1470 348 345 54 0 chrX 116102860 116103008 -50547288 - MLT1A0 LTR MaLR -13 352 197 1 1470 532 376 30 15 chrX 116103459 116103478 -50546818 - B3 SINE B2 -6 210 192 1 1470 423 0 0 0 chrX 116103478 116103525 -50546771 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 1470 532 376 30 15 chrX 116103525 116103702 -50546594 - B3 SINE B2 -25 191 11 1 1470 355 172 24 33 chrX 116104072 116104160 -50546136 - B1_Mus1 SINE Alu -56 93 9 1 1470 283 243 13 51 chrX 116104108 116104186 -50546110 - B4 SINE B4 -148 144 70 1 1470 542 288 149 48 chrX 116104412 116104748 -50545548 - ORR1D1 LTR MaLR -4 370 1 1 1470 523 311 112 15 chrX 116104764 116104960 -50545336 - ORR1D1-int LTR MaLR -380 990 776 1 1470 2925 265 97 35 chrX 116104958 116105898 -50544398 - ORR1D1-int LTR MaLR -30 1340 343 1 1470 5360 95 35 2 chrX 116105906 116106790 -50543506 + L1_Mus3 LINE L1 5466 6376 -262 1 1470 1158 122 0 0 chrX 116106815 116106995 -50543301 + (TAAG)n Simple_repeat Simple_repeat 1 180 0 1 1470 759 123 0 0 chrX 116107008 116107114 -50543182 + L1_Mus3 LINE L1 6380 6485 -153 1 1470 2389 133 25 15 chrX 116107114 116107519 -50542777 + RLTR9E LTR ERVK 1 409 0 1 1470 643 203 29 7 chrX 116107519 116107552 -50542744 + L1_Mus3 LINE L1 6486 6521 -115 1 1470 812 237 118 45 chrX 116107552 116107883 -50542413 + ETnERV2-int LTR ERVK 33 387 -2927 1 1470 10722 155 76 48 chrX 116107892 116110262 -50540034 + ETnERV2-int LTR ERVK 1071 3448 -3958 1 1470 18386 113 14 8 chrX 116110541 116111690 -50538606 + ETnERV2-int LTR ERVK 3441 4608 -2798 1 1470 2475 124 33 61 chrX 116111690 116112179 -50538117 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1470 18386 131 14 14 chrX 116112179 116114047 -50536249 + ETnERV2-int LTR ERVK 4609 6227 -1179 1 1470 466 118 0 0 chrX 116114252 116114328 -50535968 + ETnERV2-int LTR ERVK 7330 7405 -1 1 1470 2441 123 9 47 chrX 116114329 116114754 -50535542 + RLTR9E LTR ERVK 1 409 0 1 1470 795 99 21 14 chrX 116114754 116114890 -50535406 + L1_Mus3 LINE L1 6480 6617 -21 1 1470 360 0 0 0 chrX 116114890 116114930 -50535366 + (TAA)n Simple_repeat Simple_repeat 3 42 0 1 1470 1276 223 31 7 chrX 116114951 116115244 -50535052 - ORR1D1-int LTR MaLR -1068 302 3 1 1470 1048 226 136 12 chrX 116115245 116115577 -50534719 - ORR1D1 LTR MaLR 0 374 2 1 1470 203 404 10 0 chrX 116115678 116115777 -50534519 + L2 LINE L2 1934 2033 -1386 1 1470 498 308 80 71 chrX 116115793 116116143 -50534153 + RMER5 LTR ERV1 6 358 -176 1 1470 413 19 19 0 chrX 116116143 116116197 -50534099 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1 1470 397 88 0 0 chrX 116116201 116116258 -50534038 - B1_Mur4 SINE Alu -7 143 87 1 1470 342 0 0 0 chrX 116116627 116116665 -50533631 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1470 1964 144 95 24 chrX 116117207 116117585 -50532711 + RLTR44A LTR ERVK 1 405 0 1 1470 24 0 0 0 chrX 116118246 116118270 -50532026 + AT_rich Low_complexity Low_complexity 1 24 0 1 1470 189 0 0 0 chrX 116119318 116119339 -50530957 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 1470 450 0 0 0 chrX 116119339 116119388 -50530908 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 1470 341 400 35 29 chrX 116120715 116120885 -50529411 - B3A SINE B2 -16 182 12 1 1470 241 369 39 10 chrX 116121028 116121132 -50529164 + B3A SINE B2 2 108 -90 1 1470 363 44 0 0 chrX 116121154 116121199 -50529097 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 1470 782 212 36 47 chrX 116121573 116121826 -50528470 + Lx9 LINE L1 7393 7642 -2 1 1470 554 312 9 47 chrX 116122132 116122347 -50527949 - B3 SINE B2 -9 207 1 1 1470 246 100 0 0 chrX 116122594 116122613 -50527683 + (A)n Simple_repeat Simple_repeat 1 19 0 1 1470 1037 99 14 0 chrX 116122613 116122754 -50527542 + B1_Mus2 SINE Alu 5 147 0 1 1470 246 100 0 0 chrX 116122754 116122774 -50527522 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1470 830 268 15 5 chrX 116123189 116123395 -50526901 - ORR1D2 LTR MaLR -6 364 157 1 1470 2163 219 81 73 chrX 116123396 116124077 -50526219 - RMER6C LTR ERVK -4 686 1 1 1470 815 199 17 0 chrX 116124077 116124253 -50526043 - RMER6-int LTR ERVK 0 3177 2999 1 1470 24064 155 16 10 chrX 116124257 116127036 -50523260 - L1_Mus3 LINE L1 -7 6631 3851 1 1470 598 25 25 0 chrX 116127036 116127116 -50523180 + (TA)n Simple_repeat Simple_repeat 2 83 0 1 1470 24064 167 21 7 chrX 116127116 116128055 -50522241 - L1_Mus3 LINE L1 -2033 3850 2890 1 1470 594 0 0 0 chrX 116128055 116128121 -50522175 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 1 183 24064 176 26 10 chrX 116128121 116130569 -50519727 - L1_Mus3 LINE L1 -2994 2889 391 1 1471 1972 189 15 10 chrX 116130570 116130982 -50519314 - RMER6-int LTR ERVK -185 2992 2579 1 1471 245 245 0 0 chrX 116130982 116131031 -50519265 - LSU-rRNA_Hsa rRNA rRNA -3198 1837 1789 1 1471 4063 176 58 3 chrX 116131075 116131975 -50518321 - RMER6-int LTR ERVK -1434 1743 762 1 1471 959 231 174 18 chrX 116131978 116132260 -50518036 - ORR1A2 LTR MaLR 0 327 2 1 1471 999 182 7 41 chrX 116132260 116132537 -50517759 - ORR1A2-int LTR MaLR -1 1962 1753 1 1471 1858 196 3 34 chrX 116132554 116132912 -50517384 + Lx4A LINE L1 6699 7045 -13 1 1471 540 0 0 0 chrX 116132919 116132979 -50517317 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 1471 297 0 0 0 chrX 116132979 116133011 -50517285 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1471 460 158 158 0 chrX 116133016 116133109 -50517187 - MT2B LTR ERVL -411 190 83 1 1471 2177 218 5 2 chrX 116133109 116133532 -50516764 + RMER20A LTR ERVK 1 424 -92 1 1471 1469 53 0 26 chrX 116133538 116133730 -50516566 + B2_Mm1a SINE B2 2 188 -5 1 1471 497 293 0 0 chrX 116133750 116133849 -50516447 + RMER20A LTR ERVK 418 516 0 1 1471 1074 219 46 0 chrX 116133985 116134223 -50516073 - ORR1A2-int LTR MaLR -1270 693 445 1 1471 749 144 0 8 chrX 116134268 116134394 -50515902 + L1_Mus4 LINE L1 6018 6142 -494 1 1471 319 288 82 105 chrX 116134700 116135018 -50515278 - RLTR15 LTR ERVK -287 281 38 1 1471 342 0 0 0 chrX 116135018 116135056 -50515240 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1 1471 270 285 87 111 chrX 116135056 116135093 -50515203 - RLTR15 LTR ERVK -523 45 1 1 1471 835 169 7 7 chrX 116135181 116135336 -50514960 + L1_Mur1 LINE L1 4907 5061 -825 1 1471 2580 170 11 204 chrX 116135336 116136342 -50513954 - RMER17D LTR ERVK -77 812 1 1 1471 15899 198 21 39 chrX 116136343 116136428 -50513868 - L1_Mur1 LINE L1 -270 5616 5537 1 1471 4791 128 139 48 chrX 116136428 116136643 -50513653 - RLTR13D2 LTR ERVK 0 1023 808 1 1471 279 0 0 0 chrX 116136643 116136674 -50513622 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1471 4791 128 139 48 chrX 116136674 116137396 -50512900 - RLTR13D2 LTR ERVK -216 807 3 1 1471 15899 198 21 39 chrX 116137396 116138706 -50511590 - L1_Mur1 LINE L1 -350 5536 4307 1 1471 4466 134 8 59 chrX 116138706 116139554 -50510742 - RMER17D2 LTR ERVK 0 809 5 1 1471 15899 198 21 39 chrX 116139554 116141949 -50508347 - L1_Mur1 LINE L1 -1580 4306 1896 1 1471 666 313 51 56 chrX 116142055 116142723 -50507573 - L1M3 LINE L1 -1532 4608 3947 1 1471 477 0 0 0 chrX 116142723 116142776 -50507520 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 1471 666 313 51 56 chrX 116142776 116142852 -50507444 - L1M3 LINE L1 -2194 3946 3869 1 1471 1501 243 104 50 chrX 116143201 116143856 -50506440 + RMER6C LTR ERVK 1 690 0 1 1471 374 53 0 17 chrX 116145220 116145278 -50505018 + (TTTA)n Simple_repeat Simple_repeat 2 58 0 1 1471 1332 327 127 31 chrX 116145423 116146044 -50504252 + MTE-int LTR MaLR 448 1128 -452 1 1471 297 140 20 0 chrX 116146124 116146174 -50504122 + ORR1C2 LTR MaLR 3 53 -331 1 1471 7527 94 7 0 chrX 116146298 116147963 -50502333 - L1_Mus1 LINE L1 -1 6566 4889 1 1471 1380 244 32 14 chrX 116147963 116148286 -50502010 + ORR1C2 LTR MaLR 35 384 0 1 1471 422 354 74 8 chrX 116148317 116148494 -50501802 - L1MD2 LINE L1 -519 6231 6043 1 1471 6234 68 7 0 chrX 116148494 116149307 -50500989 + L1Md_F2 LINE L1 5764 6582 0 1 1471 422 354 74 8 chrX 116149307 116149371 -50500925 - L1MD2 LINE L1 -708 6042 5975 1 1471 241 351 13 0 chrX 116150394 116150471 -50499825 - ID4 SINE ID -1 82 5 1 1471 240 302 77 16 chrX 116150492 116150674 -50499622 - L1MD2 LINE L1 -4353 2280 2088 1 1471 13325 135 23 21 chrX 116150858 116153918 -50496378 + L1VL4 LINE L1 588 3857 -2020 1 1471 248 49 49 0 chrX 116153918 116153959 -50496337 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 1471 13158 203 76 22 chrX 116153959 116154776 -50495520 + L1VL4 LINE L1 3858 4676 -1201 1 1471 1182 256 64 91 chrX 116154781 116155773 -50494523 + RMER13B LTR ERVK 110 893 -65 1 1471 1381 131 0 0 chrX 116155789 116155995 -50494301 + L1_Mus4 LINE L1 5617 5822 -814 1 1471 968 221 18 9 chrX 116155995 116156214 -50494082 - RMER17C LTR ERVK 0 410 190 1 1471 258 246 0 0 chrX 116156207 116156268 -50494028 - RMER17B LTR ERVK -715 243 183 1 1471 1778 199 9 9 chrX 116156271 116156615 -50493681 - RMER17C-int LTR ERVK 0 3238 2895 1 1471 828 148 231 21 chrX 116156688 116156874 -50493422 - RMER17C-int LTR ERVK -481 2757 2533 1 1471 647 188 74 0 chrX 116156872 116157021 -50493275 - RMER17C-int LTR ERVK -896 2342 2183 1 1471 775 181 130 36 chrX 116157040 116157263 -50493033 - RMER17C-int LTR ERVK -1237 2001 1758 1 1471 741 190 51 55 chrX 116157325 116157542 -50492754 - RMER17B LTR ERVK -559 399 184 1 1471 1821 187 156 10 chrX 116157542 116158050 -50492246 + RMER17C-int LTR ERVK 2657 3238 0 1 1471 1529 205 27 58 chrX 116158053 116158500 -50491796 + RMER17C LTR ERVK 12 439 -519 1 1471 4627 181 14 5 chrX 116158504 116159336 -50490960 + Lx LINE L1 5814 6653 -1 1 1471 386 175 0 0 chrX 116159415 116159478 -50490818 + MTE2b LTR MaLR 1 63 -316 1 1471 492 346 13 13 chrX 116159503 116159661 -50490635 + MTE2b LTR MaLR 58 215 -164 1 1471 491 271 60 15 chrX 116159778 116160014 -50490282 - L1MC1 LINE L1 -327 6006 5756 1 1471 314 216 132 61 chrX 116160029 116160196 -50490100 - L1MC1 LINE L1 -478 5706 5508 1 1471 518 346 116 21 chrX 116160346 116160588 -50489708 - B4A SINE B4 -7 285 21 1 1471 288 0 0 0 chrX 116160630 116160662 -50489634 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1471 6317 31 8 3 chrX 116160676 116161442 -50488854 - L1Md_F3 LINE L1 -14 6570 5801 1 1471 284 253 35 0 chrX 116161456 116161543 -50488753 - L1MC1 LINE L1 -861 5285 5196 1 1471 303 254 61 17 chrX 116161610 116161790 -50488506 - L1MC1 LINE L1 -1082 5064 4877 1 1471 896 272 40 36 chrX 116161798 116162045 -50488251 + MTC LTR MaLR 1 248 -173 1 1471 1354 252 83 80 chrX 116162045 116162866 -50487430 + RMER6C LTR ERVK 1 720 0 1 1471 628 236 88 35 chrX 116162870 116163041 -50487255 + MTC LTR MaLR 241 420 -1 1 1471 668 345 61 11 chrX 116163096 116163720 -50486576 - L1MC1 LINE L1 -1338 4808 4154 1 1471 783 223 0 0 chrX 116164068 116164216 -50486080 + B1_Mur4 SINE Alu 2 149 -1 1 1471 13874 64 4 1 chrX 116164313 116166807 -50483489 - L1Md_F2 LINE L1 0 6582 4084 1 1471 336 302 91 57 chrX 116166943 116167135 -50483161 - L1MC1 LINE L1 -2688 3458 3254 1 1471 1451 149 52 12 chrX 116167195 116167446 -50482850 + Lx3A LINE L1 6706 6966 -15 1 1471 198 0 0 0 chrX 116167448 116167470 -50482826 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1 1471 30 59 0 0 chrX 116167783 116167834 -50482462 + AT_rich Low_complexity Low_complexity 1 51 0 1 1471 222 250 0 15 chrX 116168292 116168357 -50481939 + (TAA)n Simple_repeat Simple_repeat 1 64 0 1 1471 329 374 50 67 chrX 116168445 116168803 -50481493 - MLT1A LTR MaLR -1 373 22 1 1471 27 29 0 0 chrX 116169531 116169565 -50480731 + AT_rich Low_complexity Low_complexity 1 34 0 1 1471 23 0 0 0 chrX 116169595 116169618 -50480678 + AT_rich Low_complexity Low_complexity 1 23 0 1 1471 354 284 92 62 chrX 116170173 116170368 -50479928 - L1MD LINE L1 -1198 4948 4748 1 1471 225 211 0 0 chrX 116170454 116170511 -50479785 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1471 595 306 43 14 chrX 116171101 116171310 -50478986 + B3 SINE B2 1 215 -1 1 1471 606 106 132 19 chrX 116171398 116171504 -50478792 + RLTR20C LTR ERVK 1 118 -416 2 1471 615 363 79 17 chrX 116171509 116171913 -50478383 - MER82 DNA MER2_type -56 597 169 2 1471 428 326 30 0 chrX 116171948 116172083 -50478213 + B1F2 SINE Alu 5 143 -6 2 1471 1456 325 91 41 chrX 116172208 116172380 -50477916 - Tigger1 DNA MER2_type 0 2418 2248 2 1471 694 286 51 0 chrX 116172380 116172576 -50477720 - B3 SINE B2 -10 206 1 2 1471 1456 325 91 41 chrX 116172576 116173375 -50476921 - Tigger1 DNA MER2_type -171 2247 1400 2 1471 1239 7 0 0 chrX 116173694 116173841 -50476455 - L1Md_A LINE L1 0 6582 6436 2 1471 1115 274 42 6 chrX 116173841 116174201 -50476095 - ORR1D1 LTR MaLR -1 373 1 2 1471 669 286 110 25 chrX 116174221 116174389 -50475907 - L1MA5 LINE L1 -369 5931 5672 2 1471 387 0 0 0 chrX 116174389 116174432 -50475864 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 1471 669 286 110 24 chrX 116174432 116174682 -50475614 - L1MA5 LINE L1 -551 5749 5435 2 1471 3319 140 70 9 chrX 116174689 116175260 -50475036 - Lx3_Mus LINE L1 -8 7001 6396 2 1471 3819 102 7 0 chrX 116175271 116175810 -50474486 - L1_Mur1 LINE L1 -6 5880 5338 2 1471 1618 132 35 19 chrX 116175809 116176125 -50474171 - L1_Mur1 LINE L1 -2477 3409 3089 2 1471 5500 164 39 34 chrX 116176109 116178037 -50472259 - L1_Mur1 LINE L1 -3534 2352 209 2 1471 294 272 9 10 chrX 116178037 116178152 -50472144 - L1_Rod LINE L1 -665 5491 5318 2 1471 872 321 60 25 chrX 116178154 116178697 -50471599 - Lx6 LINE L1 -7 7453 6506 2 1471 574 300 110 13 chrX 116178726 116179008 -50471288 - Lx6 LINE L1 -707 6343 6015 2 1471 4059 189 2 5 chrX 116179004 116179933 -50470363 + Lx LINE L1 5042 5966 -688 2 1471 2078 192 3 0 chrX 116179931 116180322 -50469974 - L1_Mm LINE L1 -561 5322 4931 2 1471 7307 116 6 1 chrX 116180314 116181659 -50468637 + L1_Mus3 LINE L1 5289 6638 0 2 1471 3687 165 40 6 chrX 116181663 116182332 -50467964 + Lx LINE L1 5956 6647 -7 2 1471 465 19 0 0 chrX 116182472 116182526 -50467770 + (TA)n Simple_repeat Simple_repeat 1 54 0 2 1471 363 317 44 16 chrX 116182605 116182788 -50467508 + MTEb-int LTR MaLR 1393 1580 0 2 1471 444 329 53 105 chrX 116182793 116182940 -50467356 + MTEb LTR MaLR 6 151 -228 2 1471 968 128 0 22 chrX 116182940 116183123 -50467173 + GA-rich Low_complexity Low_complexity 1 179 0 2 1471 444 329 53 105 chrX 116183123 116183355 -50466941 + MTEb LTR MaLR 152 365 -14 2 1471 386 294 92 46 chrX 116183365 116183516 -50466780 - L1M2 LINE L1 -2840 3303 3145 2 1471 4270 161 21 8 chrX 116183516 116184244 -50466052 - RMER19A LTR ERVK 0 737 1 2 1471 386 294 92 46 chrX 116184244 116184374 -50465922 - L1M2 LINE L1 -2999 3144 3009 2 1471 266 305 0 0 chrX 116184400 116184495 -50465801 - L1_Rod LINE L1 -2827 3020 2926 2 1471 29 28 0 0 chrX 116184500 116184536 -50465760 + AT_rich Low_complexity Low_complexity 1 36 0 2 1471 1775 230 35 30 chrX 116184746 116185180 -50465116 + RMER10A LTR ERVL 5 440 -2 2 1471 676 250 26 143 chrX 116185451 116185759 -50464537 - RLTR25B LTR ERVK 0 1028 757 2 1471 6212 193 22 27 chrX 116185790 116187069 -50463227 + Lx2B LINE L1 5728 6999 -1 2 1471 1355 183 34 27 chrX 116187096 116187393 -50462903 - RLTR25B LTR ERVK -255 773 475 2 1471 1161 249 39 14 chrX 116187391 116187676 -50462620 - RLTR25B LTR ERVK -736 292 1 2 1471 212 143 0 0 chrX 116187824 116187859 -50462437 + (GGA)n Simple_repeat Simple_repeat 3 37 0 2 1471 315 49 0 0 chrX 116187862 116187903 -50462393 + (CAG)n Simple_repeat Simple_repeat 2 42 0 2 1471 987 75 0 0 chrX 116187905 116188038 -50462258 + (GAA)n Simple_repeat Simple_repeat 1 133 0 2 1471 495 0 0 0 chrX 116189179 116189234 -50461062 + (GA)n Simple_repeat Simple_repeat 1 55 0 2 1471 322 320 49 60 chrX 116189270 116189453 -50460843 - RodERV21-int LTR ERV1 -4791 200 20 2 1471 4610 112 11 13 chrX 116189679 116190683 -50459613 - L1_Mus3 LINE L1 -384 6254 5247 2 1471 22 35 0 0 chrX 116191406 116191435 -50458861 + AT_rich Low_complexity Low_complexity 1 29 0 2 1471 249 33 0 0 chrX 116191482 116191512 -50458784 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 2 1471 609 278 0 0 chrX 116191513 116191646 -50458650 - B1_Mur1 SINE Alu -8 141 9 2 1471 443 90 0 13 chrX 116191854 116191933 -50458363 + (CA)n Simple_repeat Simple_repeat 2 79 0 2 1471 443 311 138 27 chrX 116192477 116192665 -50457631 - B3A SINE B2 -2 214 6 2 1471 1727 253 29 2 chrX 116194704 116195112 -50455184 - MTC LTR MaLR 0 421 3 2 1471 252 0 0 0 chrX 116195227 116195255 -50455041 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 2 1471 242 109 87 0 chrX 116195255 116195301 -50454995 + L1_Mus2 LINE L1 6488 6537 -29 2 1471 29839 117 45 1 chrX 116195539 116196892 -50453404 + L1Md_F3 LINE L1 559 1967 -3916 2 1471 279 0 0 0 chrX 116196892 116196923 -50453373 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1471 29839 95 14 1 chrX 116196923 116200489 -50449807 + L1Md_F3 LINE L1 1968 5585 -298 2 1471 7929 42 17 0 chrX 116200491 116201468 -50448828 + L1Md_F3 LINE L1 5589 6582 -2 2 1471 3404 78 2 9 chrX 116201468 116201931 -50448365 + L1Md_F2 LINE L1 5126 5585 -298 2 1471 7242 68 22 4 chrX 116201932 116202910 -50447386 + L1Md_F2 LINE L1 5587 6582 0 2 1471 25 75 0 0 chrX 116202973 116203026 -50447270 + AT_rich Low_complexity Low_complexity 1 53 0 2 1471 21 0 0 0 chrX 116203057 116203078 -50447218 + AT_rich Low_complexity Low_complexity 1 21 0 2 1471 25 51 0 0 chrX 116203273 116203312 -50446984 + AT_rich Low_complexity Low_complexity 1 39 0 2 1471 4809 40 0 0 chrX 116203321 116203895 -50446401 + L1Md_T LINE L1 6008 6581 -1 2 1471 396 59 0 0 chrX 116203917 116203968 -50446328 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 2 1471 1843 207 14 14 chrX 116204366 116204719 -50445577 - ORR1B2 LTR MaLR 0 367 15 2 1471 1626 151 81 66 chrX 116205047 116205367 -50444929 - ORR1A2 LTR MaLR -2 325 1 2 1471 399 191 210 32 chrX 116205779 116205936 -50444360 + ORR1B1-int LTR MaLR 351 535 -974 2 1471 674 170 89 0 chrX 116205942 116206077 -50444219 - RMER19B LTR ERVK -2 900 754 2 1471 19924 134 13 1 chrX 116206106 116209357 -50440939 - L1_Mm LINE L1 0 5883 2593 2 1471 408 306 48 5 chrX 116209738 116209945 -50440351 - L1M4 LINE L1 -1949 4197 3982 2 1471 600 50 0 0 chrX 116211000 116211080 -50439216 + (CA)n Simple_repeat Simple_repeat 2 81 0 2 1471 261 300 81 44 chrX 116211502 116211638 -50438658 + Charlie4a DNA MER1_type 30 170 -338 2 1471 3474 145 48 7 chrX 116211640 116212239 -50438057 - Lx3A LINE L1 -3 6978 6355 2 1471 446 382 11 56 chrX 116212375 116212555 -50437741 - B4A SINE B4 -120 172 1 2 1471 237 425 14 7 chrX 116212555 116212701 -50437595 + RCHARR1 DNA MER1_type 195 341 -633 2 1471 526 250 0 22 chrX 116212704 116212843 -50437453 + Lx3A LINE L1 6822 6957 -24 2 1471 1603 281 32 31 chrX 116212843 116212865 -50437431 + RCHARR1 DNA MER1_type 325 345 -629 2 1471 402 57 0 0 chrX 116212865 116212918 -50437378 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1471 1603 281 32 31 chrX 116212918 116213256 -50437040 + RCHARR1 DNA MER1_type 346 690 -284 2 1471 659 246 22 0 chrX 116213256 116213394 -50436902 - B1_Mur3 SINE Alu -6 143 3 2 1471 1603 281 32 31 chrX 116213394 116213681 -50436615 + RCHARR1 DNA MER1_type 691 974 0 2 1471 251 302 64 72 chrX 116213681 116213804 -50436492 - MLT1E3 LTR MaLR -110 514 393 2 1471 210 162 0 0 chrX 116214077 116214114 -50436182 + (TATG)n Simple_repeat Simple_repeat 2 38 0 2 1471 1272 335 36 67 chrX 116214185 116215282 -50435014 + ERVL-B4-int LTR ERVL 1 1063 -4651 2 1471 329 314 92 58 chrX 116215431 116215824 -50434472 - Lx8 LINE L1 -1285 6188 5783 2 1471 250 192 164 0 chrX 116215842 116215915 -50434381 - Lx6 LINE L1 -9 7451 7367 2 1471 26 0 0 0 chrX 116215975 116216001 -50434295 + AT_rich Low_complexity Low_complexity 1 26 0 2 1471 326 337 75 61 chrX 116216260 116216413 -50433883 + B3 SINE B2 2 153 -63 2 1471 360 43 0 0 chrX 116216413 116216459 -50433837 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1471 326 337 75 61 chrX 116216459 116216517 -50433779 + B3 SINE B2 154 216 0 2 1471 399 353 67 34 chrX 116216814 116217081 -50433215 + L1MEc LINE L1 77 352 -6048 2 1471 203 133 0 22 chrX 116217909 116217955 -50432341 + A-rich Low_complexity Low_complexity 2 46 0 2 1471 381 43 0 0 chrX 116218313 116218360 -50431936 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 1471 1035 220 80 23 chrX 116218540 116218926 -50431370 + L1_Mur3 LINE L1 1219 1626 -4254 2 1471 1913 128 0 30 chrX 116218926 116219225 -50431071 - Lx LINE L1 -258 6396 6107 2 1471 988 236 4 29 chrX 116219224 116219503 -50430793 + L1_Mur3 LINE L1 2193 2464 -3416 2 1471 6972 126 15 11 chrX 116219563 116221334 -50428962 - L1_Mus3 LINE L1 -7 6631 4864 2 1471 2811 219 42 108 chrX 116221332 116222582 -50427714 + L1_Mur3 LINE L1 2497 3648 -2232 2 1471 246 395 86 6 chrX 116222587 116222750 -50427546 - MLT1F2 LTR MaLR -150 410 235 2 1471 28 61 0 0 chrX 116223382 116223431 -50426865 + AT_rich Low_complexity Low_complexity 1 49 0 2 1471 407 314 48 29 chrX 116224036 116224246 -50426050 + ERVL-int LTR ERVL 1012 1225 -4489 2 1471 712 307 55 9 chrX 116224697 116224914 -50425382 + MLT1A0 LTR MaLR 119 345 -20 2 1471 2057 296 66 48 chrX 116225237 116226207 -50424089 + ERVL-int LTR ERVL 2162 3148 -2609 2 1471 317 379 48 44 chrX 116226254 116226483 -50423813 - MT2A LTR ERVL -80 453 224 2 1471 566 308 78 14 chrX 116227275 116227492 -50422804 - RMER15 LTR ERVL -105 470 240 2 1471 8390 140 36 2 chrX 116227507 116228596 -50421700 - Lx2 LINE L1 -1 6996 5877 2 1471 513 0 0 0 chrX 116228596 116228653 -50421643 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1471 9771 174 56 22 chrX 116228653 116230734 -50419562 - Lx2 LINE L1 -1121 5876 3705 2 1471 403 317 16 8 chrX 116231058 116231182 -50419114 - ORR1E LTR MaLR -234 125 1 2 1471 25 65 0 0 chrX 116231183 116231229 -50419067 + AT_rich Low_complexity Low_complexity 1 46 0 2 1471 217 246 0 0 chrX 116231461 116231518 -50418778 + T-rich Low_complexity Low_complexity 1 57 0 2 1471 232 366 8 0 chrX 116231664 116231798 -50418498 + L1M5 LINE L1 5684 5818 -346 2 1471 1694 272 64 19 chrX 116231938 116232452 -50417844 + Lx8 LINE L1 6392 6928 -545 2 1471 335 319 137 65 chrX 116232454 116232622 -50417674 + B3A SINE B2 11 190 -8 2 1471 450 0 0 0 chrX 116232679 116232729 -50417567 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 1471 475 329 74 0 chrX 116232730 116232879 -50417417 + Lx8 LINE L1 6956 7115 -358 2 1471 294 29 0 0 chrX 116233072 116233107 -50417189 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2 1471 276 30 0 0 chrX 116233434 116233467 -50416829 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2 1471 24 77 0 0 chrX 116233987 116234039 -50416257 + AT_rich Low_complexity Low_complexity 1 52 0 2 1471 536 78 0 22 chrX 116234664 116234756 -50415540 - L1Md_F2 LINE L1 -12 6570 6481 2 1471 21 57 0 0 chrX 116234817 116234852 -50415444 + AT_rich Low_complexity Low_complexity 1 35 0 2 1471 240 111 0 0 chrX 116235889 116235925 -50414371 + (A)n Simple_repeat Simple_repeat 1 36 0 2 1471 2336 101 3 77 chrX 116236299 116236687 -50413609 + RLTR10D LTR ERVK 1 359 0 2 1471 705 117 0 0 chrX 116236701 116236821 -50413475 - L1_Mus4 LINE L1 -1 6635 6516 2 1471 353 320 26 39 chrX 116237072 116237228 -50413068 + MER31B LTR ERV1 313 466 0 2 1471 22 0 0 0 chrX 116238015 116238037 -50412259 + AT_rich Low_complexity Low_complexity 1 22 0 3 1471 249 135 0 0 chrX 116238142 116238194 -50412102 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 3 1471 226 287 79 128 chrX 116238274 116238438 -50411858 + RMER15 LTR ERVL 4 159 -416 3 1471 500 304 89 25 chrX 116238483 116238719 -50411577 + RMER15 LTR ERVL 325 575 0 3 1471 215 170 0 21 chrX 116238726 116238774 -50411522 + GA-rich Low_complexity Low_complexity 2 48 0 3 1471 493 273 55 0 chrX 116239147 116239275 -50411021 + RMER15-int LTR ERVL 746 880 -4119 3 1471 457 339 55 45 chrX 116239439 116239640 -50410656 + B3 SINE B2 1 203 -13 3 1471 395 279 162 0 chrX 116239676 116239898 -50410398 + L1M4 LINE L1 2407 2664 -3482 3 1471 1805 174 0 59 chrX 116239903 116240244 -50410052 + ORR1A4 LTR MaLR 1 321 -8 3 1471 413 304 268 12 chrX 116240270 116240438 -50409858 + B3 SINE B2 6 216 0 3 1471 424 51 34 0 chrX 116241161 116241220 -50409076 - Lx3C LINE L1 -1202 5774 5714 3 1471 4788 135 37 22 chrX 116241222 116242052 -50408244 + Lx3C LINE L1 5783 6625 -351 3 1471 4252 45 1 1 chrX 116242062 116242715 -50407581 - L1Md_F2 LINE L1 -566 6016 5364 3 1471 4626 55 7 2 chrX 116242717 116243303 -50406993 + L1Md_F2 LINE L1 5994 6582 0 3 1471 1933 157 8 34 chrX 116243303 116243660 -50406636 + Lx3C LINE L1 6620 6967 -9 3 1471 22 35 0 0 chrX 116243667 116243696 -50406600 + AT_rich Low_complexity Low_complexity 1 29 0 3 1471 359 372 120 0 chrX 116244279 116244470 -50405826 - B3 SINE B2 -2 214 1 3 1471 231 306 34 45 chrX 116244556 116244645 -50405651 + B1_Mur2 SINE Alu 8 95 -54 3 1471 698 56 0 0 chrX 116244611 116244701 -50405595 - B1_Mus2 SINE Alu -1 146 57 3 1471 252 351 13 0 chrX 116244763 116244840 -50405456 + ID4 SINE ID 2 79 -4 3 1471 235 314 114 29 chrX 116244840 116244868 -50405428 + ID_B1 SINE B4 2 115 -109 3 1471 305 369 53 23 chrX 116245007 116245140 -50405156 - B1_Mus2 SINE Alu -7 140 4 3 1471 429 36 0 0 chrX 116245185 116245240 -50405056 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1471 1379 218 94 3 chrX 116245258 116245557 -50404739 + MTC LTR MaLR 1 326 -95 3 1471 280 254 0 0 chrX 116245559 116245618 -50404678 + Lx6 LINE L1 7211 7269 -191 3 1471 415 251 1 55 chrX 116245621 116245772 -50404524 - Lx6 LINE L1 -584 6876 6764 3 1471 489 246 32 78 chrX 116245767 116245921 -50404375 + Lx6 LINE L1 7033 7179 -281 3 1471 906 181 116 0 chrX 116247181 116247380 -50402916 + URR1A DNA MER1_type 5 226 0 3 1471 1921 124 46 0 chrX 116247613 116247920 -50402376 + Lx3_Mus LINE L1 6681 7001 -8 3 1471 369 215 41 118 chrX 116247999 116248220 -50402076 + L1MDb LINE L1 967 1170 -5239 3 1471 8393 132 18 10 chrX 116248424 116250317 -50399979 - L1Md_F2 LINE L1 -2 6636 4738 3 1471 204 40 0 0 chrX 116250317 116250342 -50399954 + (TTG)n Simple_repeat Simple_repeat 3 27 0 3 1471 8393 162 22 3 chrX 116250342 116250739 -50399557 - L1Md_F2 LINE L1 -1146 4737 4331 3 1471 12466 60 2 2 chrX 116250723 116253066 -50397230 - L1Md_F2 LINE L1 -2 6580 4237 3 1471 32983 67 2 81 chrX 116253068 116259932 -50390364 - L1Md_T LINE L1 0 6582 307 3 183 15652 176 17 7 chrX 116259925 116262176 -50388120 - L1VL2 LINE L1 -1533 4350 2087 3 1472 243 88 0 0 chrX 116262176 116262210 -50388086 + (TTG)n Simple_repeat Simple_repeat 2 35 0 3 1472 15652 187 18 24 chrX 116262210 116263905 -50386391 - L1VL2 LINE L1 -3797 2086 395 3 1472 615 311 97 41 chrX 116263932 116264274 -50386022 + ORR1D2 LTR MaLR 1 361 -9 3 1472 456 242 64 43 chrX 116264554 116264699 -50385597 - ORR1D1 LTR MaLR -77 297 170 3 1472 223 299 12 61 chrX 116264893 116264975 -50385321 + RSINE1 SINE B4 88 165 0 3 1472 686 74 24 8 chrX 116265187 116265310 -50384986 + L1_Mus3 LINE L1 6499 6623 -15 3 1472 475 285 21 35 chrX 116265487 116265629 -50384667 + B1F SINE Alu 9 148 -1 3 1472 252 233 0 0 chrX 116265670 116265743 -50384553 + A-rich Low_complexity Low_complexity 1 73 0 3 1472 511 202 31 47 chrX 116265923 116266115 -50384181 - RMER17C LTR ERVK -133 277 89 3 1472 712 144 0 0 chrX 116266531 116266642 -50383654 - B1_Mus1 SINE Alu -1 147 37 3 1472 210 318 15 15 chrX 116266815 116266882 -50383414 + ID2 SINE ID 6 72 -11 3 1472 201 363 0 11 chrX 116266889 116266981 -50383315 + GA-rich Low_complexity Low_complexity 3 93 0 3 1472 219 69 0 0 chrX 116268279 116268308 -50381988 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1472 774 162 6 11 chrX 116268304 116268485 -50381811 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 1472 492 18 0 0 chrX 116268487 116268544 -50381752 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 3 1472 201 167 0 0 chrX 116268661 116268697 -50381599 + A-rich Low_complexity Low_complexity 1 36 0 3 1472 279 253 0 0 chrX 116269519 116269598 -50380698 - L1MD LINE L1 -2475 5520 5442 3 1472 24 53 0 0 chrX 116269598 116269636 -50380660 + AT_rich Low_complexity Low_complexity 1 38 0 3 1472 1713 276 52 9 chrX 116269726 116270186 -50380110 - Lx6 LINE L1 -1 7459 6980 3 1472 703 204 12 24 chrX 116270233 116270399 -50379897 - Lx3_Mus LINE L1 -863 6113 5950 3 1472 466 238 135 0 chrX 116270431 116270557 -50379739 + RMER6C LTR ERVK 206 348 -342 3 1472 1832 169 138 1 chrX 116270560 116270962 -50379334 - Lx3_Mus LINE L1 -1069 5940 5497 3 1472 1943 195 122 81 chrX 116271046 116271709 -50378587 - RMER6C LTR ERVK 0 690 1 3 1472 816 249 6 28 chrX 116271728 116271906 -50378390 + MTD LTR MaLR 232 405 -14 3 1472 654 216 25 6 chrX 116272065 116272228 -50378068 - Lx9 LINE L1 -164 7480 7315 3 1472 22 0 0 0 chrX 116272461 116272483 -50377813 + AT_rich Low_complexity Low_complexity 1 22 0 3 1472 22 70 0 0 chrX 116273011 116273054 -50377242 + AT_rich Low_complexity Low_complexity 1 43 0 3 1472 7734 54 8 2 chrX 116273973 116274954 -50375342 + L1Md_F2 LINE L1 5593 6579 -3 3 1472 227 272 109 0 chrX 116275105 116275197 -50375099 - MTE2a LTR MaLR 0 379 278 3 1472 474 128 32 0 chrX 116276401 116276495 -50373801 + (TA)n Simple_repeat Simple_repeat 2 98 0 3 1472 348 339 46 0 chrX 116276537 116276646 -50373650 - B1_Mur1 SINE Alu -26 123 10 3 1472 21 36 0 0 chrX 116276843 116276871 -50373425 + AT_rich Low_complexity Low_complexity 1 28 0 3 1472 23 0 0 0 chrX 116277064 116277087 -50373209 + AT_rich Low_complexity Low_complexity 1 23 0 3 1472 1220 184 40 59 chrX 116277191 116277599 -50372697 - RMER17C LTR ERVK -519 439 16 3 1472 1776 184 79 11 chrX 116277602 116277981 -50372315 - RMER17C-int LTR ERVK 0 3238 2834 3 1472 1731 231 117 105 chrX 116278734 116279459 -50370837 - RMER19A LTR ERVK -3 734 1 3 1472 30 27 0 0 chrX 116280000 116280037 -50370259 + AT_rich Low_complexity Low_complexity 1 37 0 3 1472 608 206 7 0 chrX 116280160 116280301 -50369995 + (TA)n Simple_repeat Simple_repeat 2 143 0 3 1472 200 206 0 45 chrX 116280360 116280426 -50369870 + (TATAA)n Simple_repeat Simple_repeat 5 67 0 3 1472 1043 110 7 0 chrX 116281273 116281419 -50368877 + B1_Mus1 SINE Alu 2 148 0 3 1472 23 0 0 0 chrX 116281628 116281651 -50368645 + AT_rich Low_complexity Low_complexity 1 23 0 3 1472 186 43 0 0 chrX 116281762 116281785 -50368511 + (TC)n Simple_repeat Simple_repeat 2 24 0 3 1472 384 22 0 0 chrX 116281793 116281838 -50368458 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1472 1974 284 81 3 chrX 116281844 116282451 -50367845 - Lx8 LINE L1 -610 6863 6210 3 1472 25 0 0 0 chrX 116282453 116282478 -50367818 + AT_rich Low_complexity Low_complexity 1 25 0 3 1472 730 289 34 59 chrX 116282876 116283103 -50367193 - Lx7 LINE L1 -1792 5904 5683 3 1472 1743 74 0 0 chrX 116283103 116283332 -50366964 - L1_Mus1 LINE L1 -3 6564 6336 3 1472 730 283 71 67 chrX 116283332 116283578 -50366718 - Lx7 LINE L1 -584 5716 5444 3 1472 348 354 67 41 chrX 116283678 116283977 -50366319 + B4 SINE B4 2 281 -11 3 1472 1672 300 16 58 chrX 116284409 116284978 -50365318 + RMER15 LTR ERVL 29 573 -2 3 1472 1431 87 156 4 chrX 116285100 116285343 -50364953 - IAPLTR2a LTR ERVK 0 411 132 3 1472 3270 34 0 0 chrX 116285343 116285728 -50364568 - IAPEz-int LTR ERVK -446 6035 5651 3 1472 2680 64 0 3 chrX 116285721 116286064 -50364232 - IAPEz-int LTR ERVK -4781 1700 1359 3 1472 4002 84 34 35 chrX 116286064 116286797 -50363499 - IAPEz-int LTR ERVK -5819 662 10 3 1472 336 96 82 0 chrX 116286807 116286880 -50363416 - IAPEz-int LTR ERVK -1906 81 3 3 1472 2319 96 109 76 chrX 116286882 116287342 -50362954 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1472 21 57 0 0 chrX 116287785 116287820 -50362476 + AT_rich Low_complexity Low_complexity 1 35 0 3 1472 21 71 0 0 chrX 116287841 116287883 -50362413 + AT_rich Low_complexity Low_complexity 1 42 0 3 1472 23 33 0 0 chrX 116287923 116287953 -50362343 + AT_rich Low_complexity Low_complexity 1 30 0 3 1472 1084 281 30 22 chrX 116287953 116288320 -50361976 - ORR1D1 LTR MaLR -4 370 1 3 1472 1617 311 43 28 chrX 116288320 116289038 -50361258 - ORR1D1-int LTR MaLR -58 1905 534 3 1472 3442 201 56 27 chrX 116289040 116289788 -50360508 + RMER19B LTR ERVK 1 770 -132 3 1472 4492 87 8 2 chrX 116289789 116290424 -50359872 - L1_Mus2 LINE L1 0 6566 5928 3 1472 2525 54 30 0 chrX 116290424 116290788 -50359508 + L1_Mus2 LINE L1 5548 5922 -644 3 1472 697 161 86 14 chrX 116290788 116290927 -50359369 + RMER19B LTR ERVK 754 902 0 3 1472 678 233 154 24 chrX 116290933 116291179 -50359117 - ORR1D1-int LTR MaLR -974 535 258 3 1472 233 340 38 38 chrX 116291408 116291567 -50358729 - LTRIS2 LTR ERV1 -53 511 353 3 1472 282 403 0 7 chrX 116293340 116293480 -50356816 - ID_B1 SINE B4 0 224 86 3 1472 3468 20 0 0 chrX 116293921 116294317 -50355979 + MTA_Mm LTR MaLR 1 396 0 3 1472 1751 124 11 11 chrX 116294525 116294809 -50355487 + L1_Mus3 LINE L1 5940 6223 -415 3 1472 247 21 0 130 chrX 116294809 116294863 -50355433 + T-rich Low_complexity Low_complexity 1 47 0 3 1472 2021 95 0 0 chrX 116294879 116295162 -50355134 - L1_Mus1 LINE L1 -1 6566 6284 3 1472 33 56 0 14 chrX 116295579 116295630 -50354666 + AT_rich Low_complexity Low_complexity 1 51 0 3 1472 2911 102 7 0 chrX 116295630 116296053 -50354243 + L1_Mus3 LINE L1 6211 6636 -2 3 1472 33 56 0 14 chrX 116296053 116296073 -50354223 + AT_rich Low_complexity Low_complexity 1 20 0 3 1472 246 125 0 0 chrX 116297323 116297371 -50352925 + (TC)n Simple_repeat Simple_repeat 1 48 0 3 1472 237 108 0 0 chrX 116297371 116297408 -50352888 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1472 280 279 29 97 chrX 116297433 116297536 -50352760 - B3 SINE B2 -34 182 87 3 1472 513 333 0 6 chrX 116297547 116297710 -50352586 + Lx9 LINE L1 6834 6995 -649 3 1472 1568 90 8 47 chrX 116297711 116297968 -50352328 - L1Md_F2 LINE L1 -4 6578 6332 3 1472 1916 80 0 0 chrX 116297968 116298217 -50352079 - L1Md_F2 LINE L1 -348 6234 5986 3 1472 274 125 0 30 chrX 116298209 116298275 -50352021 + L1Md_A LINE L1 1028 1091 -5431 3 1472 3338 23 0 0 chrX 116298275 116298666 -50351630 + L1Md_A LINE L1 6192 6582 0 3 1472 539 95 0 0 chrX 116298768 116298863 -50351433 + L1Md_A LINE L1 1177 1271 -5456 3 1472 406 379 24 50 chrX 116299002 116299383 -50350913 + Lx9 LINE L1 6994 7364 -280 3 1472 1167 84 0 0 chrX 116299816 116300065 -50350231 + (GAA)n Simple_repeat Simple_repeat 1 249 0 3 1472 1349 330 54 20 chrX 116300175 116300771 -50349525 + Lx7 LINE L1 6568 7183 -513 3 1472 438 53 0 0 chrX 116300909 116300966 -50349330 + (GA)n Simple_repeat Simple_repeat 1 57 0 3 1472 1655 279 54 5 chrX 116301078 116301725 -50348571 + L1_Mur3 LINE L1 4866 5587 -575 4 1472 631 240 7 27 chrX 116301759 116301909 -50348387 + B1_Mur1 SINE Alu 3 149 0 4 1472 788 295 20 4 chrX 116301943 116302188 -50348108 - Lx9 LINE L1 -797 6847 6599 4 1472 1356 64 0 21 chrX 116302231 116302422 -50347874 + B2_Mm2 SINE B2 1 187 -8 4 1472 227 189 0 51 chrX 116302439 116302517 -50347779 + (TATATG)n Simple_repeat Simple_repeat 4 77 0 4 1472 186 43 0 0 chrX 116302518 116302541 -50347755 + (CATA)n Simple_repeat Simple_repeat 1 23 0 4 1472 335 308 0 0 chrX 116303158 116303249 -50347047 + Lx9 LINE L1 6618 6708 -936 4 1472 184 327 98 10 chrX 116303505 116303607 -50346689 + L4 LINE RTE 549 659 -1370 4 1472 25 31 0 0 chrX 116303625 116303657 -50346639 + AT_rich Low_complexity Low_complexity 1 32 0 4 1472 453 307 77 13 chrX 116304164 116304477 -50345819 + L1M3 LINE L1 2686 3018 -3128 4 1472 989 97 0 7 chrX 116305044 116305179 -50345117 + B1_Mus2 SINE Alu 3 136 -11 4 1472 243 0 0 0 chrX 116305179 116305206 -50345090 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 4 1472 1953 65 4 4 chrX 116305672 116305934 -50344362 + L1_Mus1 LINE L1 6290 6551 -16 4 1472 21 71 0 0 chrX 116306050 116306092 -50344204 + AT_rich Low_complexity Low_complexity 1 42 0 4 1472 255 167 0 0 chrX 116306340 116306406 -50343890 + T-rich Low_complexity Low_complexity 2 67 0 4 1472 24 67 0 0 chrX 116306546 116306591 -50343705 + AT_rich Low_complexity Low_complexity 1 45 0 4 1472 540 262 10 152 chrX 116307265 116307463 -50342833 + MT2A LTR ERVL 8 177 -356 4 1472 662 278 31 127 chrX 116307527 116307879 -50342417 - RMER4B LTR ERVK -57 554 137 4 1472 712 124 40 40 chrX 116307879 116308030 -50342266 + L1_Mus4 LINE L1 6486 6636 0 4 1472 662 299 58 75 chrX 116308030 116308067 -50342229 - RMER4B LTR ERVK -449 136 100 4 1472 11793 215 55 27 chrX 116308067 116309875 -50340421 + MERVL_2A-int LTR ERVL 520 2399 -3362 4 1472 1118 70 0 0 chrX 116309875 116310018 -50340278 + B1_Mus1 SINE Alu 2 144 -4 4 1472 11793 215 55 27 chrX 116310018 116310950 -50339346 + MERVL_2A-int LTR ERVL 2400 3338 -2423 4 1472 2504 218 23 28 chrX 116310958 116311568 -50338728 + MERVL_2A-int LTR ERVL 5060 5666 -95 4 1472 273 217 20 80 chrX 116311572 116311672 -50338624 + ORR1A3-int LTR MaLR 546 639 -1324 4 1472 496 278 8 38 chrX 116311728 116311859 -50338437 + MT2A LTR ERVL 1 127 -406 4 1472 1298 200 27 69 chrX 116311902 116312344 -50337952 + RMER17C LTR ERVK 16 441 -517 4 1472 366 284 47 84 chrX 116312344 116312559 -50337737 + MT2A LTR ERVL 335 541 -60 4 1472 3404 139 11 7 chrX 116312593 116313145 -50337151 - Lx LINE L1 -11 6643 6090 4 1472 2182 177 3 3 chrX 116313147 116313533 -50336763 + L1_Mm LINE L1 5483 5868 -15 4 1472 24 0 0 0 chrX 116313735 116313759 -50336537 + AT_rich Low_complexity Low_complexity 1 24 0 4 1472 360 123 0 0 chrX 116313959 116314016 -50336280 + Lx LINE L1 5691 5747 -907 4 1472 489 112 0 0 chrX 116314173 116314253 -50336043 + L1_Mus2 LINE L1 6486 6565 -1 4 1472 2232 68 45 0 chrX 116314446 116314755 -50335541 + L1_Mus2 LINE L1 6244 6566 0 4 1472 184 277 22 67 chrX 116315011 116315100 -50335196 - MIR3 SINE MIR -11 197 113 4 1472 26 30 0 0 chrX 116315565 116315598 -50334698 + AT_rich Low_complexity Low_complexity 1 33 0 4 1472 24 0 0 0 chrX 116315690 116315714 -50334582 + AT_rich Low_complexity Low_complexity 1 24 0 4 1472 215 61 0 29 chrX 116315924 116315958 -50334338 + (TTAG)n Simple_repeat Simple_repeat 3 35 0 4 1472 23 54 0 0 chrX 116317067 116317104 -50333192 + AT_rich Low_complexity Low_complexity 1 37 0 4 1472 2346 288 60 28 chrX 116317165 116317991 -50332305 - RMER1C Other Other -11 1331 479 4 1472 731 285 14 68 chrX 116317994 116318216 -50332080 - B3 SINE B2 0 216 7 4 1472 1629 245 18 29 chrX 116318441 116318799 -50331497 - RMER6D LTR ERVK 0 720 369 4 1472 570 15 0 0 chrX 116318799 116318866 -50331430 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 1472 1629 245 18 29 chrX 116318866 116318893 -50331403 - RMER6D LTR ERVK -352 368 339 4 1472 1727 330 23 11 chrX 116318901 116319598 -50330698 - Lx8 LINE L1 -482 6991 6287 4 1472 669 261 60 32 chrX 116319609 116319860 -50330436 - Lx9 LINE L1 -4 7640 7375 4 1472 2406 126 7 29 chrX 116319860 116320278 -50330018 + RLTR9E LTR ERVK 1 409 0 4 1472 669 261 60 32 chrX 116320278 116320307 -50329989 - Lx9 LINE L1 -270 7374 7352 4 1472 626 37 0 12 chrX 116320317 116320399 -50329897 + (TTCC)n Simple_repeat Simple_repeat 4 84 0 4 1472 405 102 0 0 chrX 116320400 116320459 -50329837 + (TTC)n Simple_repeat Simple_repeat 3 61 0 4 1472 567 0 0 0 chrX 116320459 116320522 -50329774 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 1472 180 125 0 0 chrX 116321244 116321276 -50329020 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1472 345 354 10 0 chrX 116321288 116321384 -50328912 - RSINE1 SINE B4 -21 144 48 4 1472 21 0 0 0 chrX 116321806 116321827 -50328469 + AT_rich Low_complexity Low_complexity 1 21 0 4 1472 224 195 0 0 chrX 116322783 116322824 -50327472 + CT-rich Low_complexity Low_complexity 2 42 0 4 1472 236 30 30 0 chrX 116323662 116323695 -50326601 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 4 1472 549 44 0 0 chrX 116324390 116324458 -50325838 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 1472 2479 287 35 0 chrX 116324586 116325189 -50325107 - Lx5 LINE L1 0 7050 6427 4 1472 2402 204 39 33 chrX 116325175 116325947 -50324349 - Lx5 LINE L1 -882 6168 5383 4 1472 14921 149 55 26 chrX 116325950 116331193 -50319103 - L1_Mus2 LINE L1 0 6566 725 4 1472 350 312 14 0 chrX 116331190 116331334 -50318962 - L1_Mus2 LINE L1 -5801 815 670 4 1472 359 301 26 50 chrX 116331364 116331581 -50318715 - L1VL1 LINE L1 -5981 437 84 4 1472 3797 224 28 25 chrX 116331630 116332596 -50317700 - Lx5 LINE L1 -480 5397 4429 4 1472 2582 65 5 3 chrX 116332681 116333052 -50317244 - Lx9 LINE L1 -876 5004 4654 4 1472 935 28 0 0 chrX 116333044 116333151 -50317145 + L1Md_A LINE L1 5480 5586 -297 4 1472 8846 13 0 0 chrX 116333151 116334187 -50316109 + L1Md_A LINE L1 5587 6582 0 4 1472 1084 316 84 10 chrX 116334191 116334705 -50315591 - Lx9 LINE L1 -445 7199 6648 4 1472 25 51 0 0 chrX 116334765 116334804 -50315492 + AT_rich Low_complexity Low_complexity 1 39 0 4 1472 257 253 0 32 chrX 116335309 116335403 -50314893 + CT-rich Low_complexity Low_complexity 2 92 0 4 1472 35 63 0 0 chrX 116335737 116335800 -50314496 + AT_rich Low_complexity Low_complexity 1 63 0 4 1472 2153 228 11 7 chrX 116335989 116336440 -50313856 - Lx4A LINE L1 -9 7049 6597 4 1472 18491 118 33 6 chrX 116336443 116336596 -50313700 + L1_Mus4 LINE L1 1071 1293 -2622 4 1472 218 0 94 0 chrX 116336596 116336628 -50313668 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 4 1472 18491 175 18 14 chrX 116336628 116336972 -50313324 + L1_Mus4 LINE L1 1293 1640 -4243 4 1472 207 0 0 0 chrX 116336972 116336995 -50313301 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1472 18491 177 17 21 chrX 116336995 116340838 -50309458 + L1_Mus4 LINE L1 1641 5281 -605 4 1472 3227 55 10 0 chrX 116340825 116341225 -50309071 + L1Md_F2 LINE L1 5956 6359 -223 4 1472 6494 145 11 8 chrX 116341226 116342544 -50307752 + L1_Mus4 LINE L1 5315 6634 -2 4 1472 726 190 0 27 chrX 116342577 116342723 -50307573 - Lx4A LINE L1 -544 6514 6373 4 1472 786 194 29 29 chrX 116342955 116343130 -50307166 - MYSERV16_I-int LTR ERVK -1512 814 640 4 1472 580 111 10 10 chrX 116343135 116343235 -50307061 + MYSERV16_I-int LTR ERVK 826 925 -1401 4 1472 5234 169 80 13 chrX 116343241 116344416 -50305880 + MYSERV16_I-int LTR ERVK 1067 2320 -6 4 1472 2386 214 65 10 chrX 116344421 116344927 -50305369 + RLTR20C LTR ERVK 1 534 0 4 1472 396 305 0 105 chrX 116345292 116345435 -50304861 + RSINE1 SINE B4 4 131 -34 4 1472 456 51 0 0 chrX 116345451 116345510 -50304786 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1472 2784 224 9 2 chrX 116345915 116346473 -50303823 + Lx LINE L1 6070 6631 -23 4 1472 342 0 0 0 chrX 116346473 116346511 -50303785 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 1472 269 323 48 39 chrX 116348016 116348119 -50302177 - PB1D7 SINE Alu -4 116 13 4 1472 27 81 0 0 chrX 116348243 116348305 -50301991 + AT_rich Low_complexity Low_complexity 1 62 0 4 1472 1215 252 122 0 chrX 116348459 116348796 -50301500 - ORR1C1 LTR MaLR 0 378 1 4 1472 918 274 155 9 chrX 116348796 116349113 -50301183 - ORR1C2 LTR MaLR -7 377 9 4 1472 3653 296 87 23 chrX 116349121 116349165 -50301131 - ORR1C2-int LTR MaLR 0 1370 1326 4 1472 328 20 0 39 chrX 116349165 116349216 -50301080 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 4 1472 3653 296 87 23 chrX 116349216 116350459 -50299837 - ORR1C2-int LTR MaLR -45 1325 2 4 1472 893 254 145 30 chrX 116350459 116350627 -50299669 - ORR1C2 LTR MaLR 0 378 184 4 1472 528 16 0 0 chrX 116350627 116350688 -50299608 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 1472 893 254 145 30 chrX 116350688 116350856 -50299440 - ORR1C2 LTR MaLR -195 183 4 4 1472 1437 233 176 66 chrX 116351455 116352075 -50298221 + RMER6C LTR ERVK 3 690 0 4 1472 206 318 32 0 chrX 116352153 116352216 -50298080 + MIRc SINE MIR 14 78 -190 4 1472 24 0 0 0 chrX 116352539 116352563 -50297733 + AT_rich Low_complexity Low_complexity 1 24 0 4 1472 7857 163 30 16 chrX 116352563 116354204 -50296092 - Lx2 LINE L1 -4 6993 5321 4 1472 1934 208 3 5 chrX 116354204 116354585 -50295711 + Lx LINE L1 6266 6645 -9 4 1472 6579 173 34 10 chrX 116354585 116355328 -50294968 - Lx2 LINE L1 -557 5320 4565 4 1472 366 353 0 0 chrX 116355382 116355484 -50294812 - B1F SINE Alu -45 104 3 4 1472 3364 161 47 0 chrX 116356002 116356599 -50293697 + Lx3C LINE L1 6344 6968 -8 4 1472 42 36 0 0 chrX 116356599 116356655 -50293641 + AT_rich Low_complexity Low_complexity 1 56 0 4 1472 458 337 168 9 chrX 116356829 116357274 -50293022 + Charlie1a DNA MER1_type 81 597 -858 4 1472 698 214 51 13 chrX 116357275 116357431 -50292865 - Lx5 LINE L1 -207 6843 6682 4 1472 246 258 85 102 chrX 116357427 116357604 -50292692 + Lx5 LINE L1 6877 7050 0 4 1472 2477 34 0 0 chrX 116357782 116358075 -50292221 + L1Md_F2 LINE L1 6275 6567 -15 4 1472 6887 126 7 0 chrX 116358098 116359341 -50290955 - L1_Mus3 LINE L1 -7 6631 5379 4 1472 23 0 0 0 chrX 116359368 116359391 -50290905 + AT_rich Low_complexity Low_complexity 1 23 0 4 1472 2453 45 0 0 chrX 116360952 116361244 -50289052 - L1Md_F2 LINE L1 -285 5598 5307 4 1472 7848 44 2 4 chrX 116361244 116362210 -50288086 + L1Md_F2 LINE L1 5619 6582 0 4 1472 236 210 0 69 chrX 116362817 116362842 -50287454 + Lx9 LINE L1 7413 7434 -210 4 1472 537 58 0 0 chrX 116362842 116362911 -50287385 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 4 1472 290 115 19 0 chrX 116362912 116362964 -50287332 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1472 236 210 0 69 chrX 116362964 116363023 -50287273 + Lx9 LINE L1 7435 7493 -151 4 1472 273 57 0 0 chrX 116363063 116363098 -50287198 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1472 252 56 0 0 chrX 116364599 116364621 -50285675 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 1472 642 113 0 0 chrX 116364621 116364718 -50285578 + (TA)n Simple_repeat Simple_repeat 1 97 0 4 1472 252 56 0 0 chrX 116364718 116364731 -50285565 + (CA)n Simple_repeat Simple_repeat 2 14 0 4 1472 284 367 52 17 chrX 116364731 116364903 -50285393 + Tigger5 DNA MER2_type 61 238 -2168 4 1472 34501 47 0 25 chrX 116365061 116370490 -50279806 + L1Md_Gf LINE L1 199 5589 -297 4 1472 8394 35 0 0 chrX 116370490 116371486 -50278810 + L1Md_T LINE L1 5587 6582 0 5 1472 34501 44 0 27 chrX 116371486 116371497 -50278799 + L1Md_Gf LINE L1 5590 5598 -288 4 1472 180 0 0 0 chrX 116372875 116372895 -50277401 + (AAATG)n Simple_repeat Simple_repeat 4 23 0 5 1472 367 390 83 70 chrX 116372986 116373432 -50276864 - L2 LINE L2 -342 3077 2626 5 1472 24 0 0 0 chrX 116373700 116373724 -50276572 + AT_rich Low_complexity Low_complexity 1 24 0 5 1472 7236 97 22 1 chrX 116373752 116375218 -50275078 - L1_Mus1 LINE L1 -3 6564 5053 5 1472 2567 43 174 0 chrX 116375218 116375568 -50274728 + IAPLTR2a LTR ERVK 1 411 0 5 1472 1029 111 25 82 chrX 116375569 116375765 -50274531 + IAPEz-int LTR ERVK 9 193 -6288 5 1472 245 309 0 0 chrX 116375765 116375820 -50274476 + RLTR27 LTR ERVK 221 275 -34 5 1472 925 52 9 0 chrX 116375820 116375936 -50274360 + IAPEz-int LTR ERVK 168 284 -6197 5 1472 10287 65 53 34 chrX 116375933 116377368 -50272928 + IAPEz-int LTR ERVK 175 1636 -4845 5 1472 5677 68 12 7 chrX 116377367 116378107 -50272189 + IAPEz-int LTR ERVK 5736 6479 -2 5 1472 2644 29 174 0 chrX 116378109 116378459 -50271837 + IAPLTR2a LTR ERVK 1 411 0 5 1472 13202 116 8 16 chrX 116378459 116380550 -50269746 - L1_Mm LINE L1 -825 5058 2985 5 1472 5157 157 56 9 chrX 116380647 116380761 -50269535 - RMER17B LTR ERVK -5 953 821 5 1472 372 22 0 0 chrX 116380761 116380806 -50269490 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1472 5157 157 56 9 chrX 116380806 116381601 -50268695 - RMER17B LTR ERVK -138 820 1 5 1472 2785 174 48 42 chrX 116381625 116382224 -50268072 - RMER17A-int LTR ERVK -30 1698 1096 5 1472 436 228 16 31 chrX 116382276 116382403 -50267893 - RMER17A-int LTR ERVK -622 1106 982 5 1472 207 0 0 0 chrX 116382504 116382527 -50267769 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1472 695 180 12 36 chrX 116382529 116382696 -50267600 - RMER17A-int LTR ERVK -793 935 773 5 1472 494 205 128 32 chrX 116383145 116383174 -50267122 - RMER17A-int LTR ERVK -1544 184 156 5 1472 1167 117 0 0 chrX 116383174 116383354 -50266942 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 1472 494 205 128 32 chrX 116383354 116383480 -50266816 - RMER17A-int LTR ERVK -1573 155 14 5 1472 1918 160 42 30 chrX 116383503 116383838 -50266458 - MERVK26-int LTR ERVK -6580 339 1 5 1472 2924 179 99 36 chrX 116383838 116384442 -50265854 - RLTR26 LTR ERVK 0 642 1 5 1472 909 86 33 0 chrX 116384472 116384624 -50265672 + (TTTC)n Simple_repeat Simple_repeat 4 160 0 5 1472 360 235 0 0 chrX 116384633 116384748 -50265548 + CT-rich Low_complexity Low_complexity 2 116 0 5 1472 667 368 15 11 chrX 116384761 116385030 -50265266 - B4A SINE B4 -20 272 3 5 1472 21 0 0 0 chrX 116386278 116386299 -50263997 + AT_rich Low_complexity Low_complexity 1 21 0 5 1472 5605 131 64 9 chrX 116386442 116387407 -50262889 - L1_Mus3 LINE L1 -608 6030 5001 5 1472 410 36 0 18 chrX 116387407 116387464 -50262832 + (TTTA)n Simple_repeat Simple_repeat 1 56 0 5 1472 1087 92 0 0 chrX 116387467 116387609 -50262687 - B1_Mus2 SINE Alu -5 142 1 5 1472 5605 162 73 16 chrX 116387609 116387849 -50262447 - L1_Mus3 LINE L1 -883 5000 4760 5 1472 2801 139 52 82 chrX 116387851 116388447 -50261849 + L1_Mus3 LINE L1 6061 6638 0 5 1472 396 0 0 0 chrX 116388552 116388596 -50261700 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1472 345 380 44 0 chrX 116388600 116388737 -50261559 - B3A SINE B2 -53 145 3 5 1472 260 307 29 138 chrX 116389265 116389439 -50260857 + MTD LTR MaLR 5 159 -260 5 1472 1121 79 0 0 chrX 116389468 116389608 -50260688 + B1_Mm SINE Alu 1 140 -7 5 1472 210 154 0 0 chrX 116389610 116389649 -50260647 + A-rich Low_complexity Low_complexity 3 41 0 5 1472 271 312 0 0 chrX 116390156 116390236 -50260060 + CT-rich Low_complexity Low_complexity 1 80 0 5 1473 808 340 38 56 chrX 116392565 116393008 -50257288 - Lx8 LINE L1 -874 6599 6165 5 1473 240 137 38 38 chrX 116393138 116393191 -50257105 - L1_Rod LINE L1 -638 5209 5157 5 1473 548 207 148 0 chrX 116393246 116393381 -50256915 + URR1A DNA MER1_type 71 225 -1 5 1473 318 329 62 21 chrX 116393385 116393918 -50256378 - L1M2 LINE L1 -937 5206 4624 5 1473 1530 228 3 3 chrX 116393919 116394232 -50256064 + RMER6D LTR ERVK 1 313 -407 5 1473 541 205 8 39 chrX 116394223 116394350 -50255946 + RMER6D LTR ERVK 568 690 0 5 1473 271 317 9 9 chrX 116394447 116394552 -50255744 - MTEa LTR MaLR 0 379 275 5 1473 1460 282 56 33 chrX 116394558 116395079 -50255217 - RLTR20A2 LTR ERVK 0 578 46 5 1473 736 332 47 44 chrX 116395078 116395374 -50254922 - MTEa LTR MaLR -78 301 5 5 1473 2608 106 40 2 chrX 116395457 116395853 -50254443 + RLTR9F LTR ERVK 1 411 -4 5 1473 6100 281 51 34 chrX 116395879 116399427 -50250869 + ETnERV-int LTR ERVK 37 3582 -2585 5 1473 4048 54 0 0 chrX 116399429 116399928 -50250368 - L1Md_F2 LINE L1 -12 6570 6072 5 1473 4603 42 0 2 chrX 116399928 116400691 -50249605 + L1Md_F2 LINE L1 5321 6082 -500 5 1473 1336 150 30 0 chrX 116400691 116400891 -50249405 + ETnERV-int LTR ERVK 4352 4557 -2849 5 1473 258 325 59 42 chrX 116400891 116401010 -50249286 - MTEa LTR MaLR -254 125 5 5 1473 489 252 0 0 chrX 116401171 116401274 -50249022 + Lx7 LINE L1 6485 6587 -1109 5 1473 1129 208 5 5 chrX 116401278 116401491 -50248805 + MTC LTR MaLR 1 213 -208 5 1473 6320 13 0 0 chrX 116401491 116402206 -50248090 + L1Md_A LINE L1 4872 5586 -297 5 1473 8714 19 0 0 chrX 116402206 116403202 -50247094 + L1Md_A LINE L1 5587 6582 0 5 1473 22 0 0 0 chrX 116403215 116403237 -50247059 + AT_rich Low_complexity Low_complexity 1 22 0 5 1473 877 312 0 5 chrX 116403237 116403459 -50246837 + MTC LTR MaLR 196 416 -5 5 1473 2369 269 28 12 chrX 116403464 116404107 -50246189 + Lx7 LINE L1 6597 7249 -447 5 1473 255 61 0 0 chrX 116404108 116404141 -50246155 + (TCCC)n Simple_repeat Simple_repeat 1 33 0 5 1473 426 256 8 127 chrX 116404150 116404284 -50246012 - B1_Mur3 SINE Alu -3 146 29 5 1473 33409 76 4 7 chrX 116405441 116411533 -50238763 - L1Md_F2 LINE L1 0 6582 511 5 1473 26 0 0 0 chrX 116411898 116411924 -50238372 + AT_rich Low_complexity Low_complexity 1 26 0 5 1473 273 358 48 8 chrX 116412029 116412153 -50238143 - MLT2F LTR ERVL -124 539 411 5 1473 1753 167 21 127 chrX 116412301 116412733 -50237563 - RLTR25B LTR ERVK -254 774 389 5 1473 1234 233 33 33 chrX 116412733 116413092 -50237204 + RLTR10D LTR ERVK 1 359 0 5 1473 13198 264 19 11 chrX 116413092 116416673 -50233623 + IAP-d-int LTR ERVK 1 3608 -2934 5 1473 24 0 0 0 chrX 116418114 116418138 -50232158 + AT_rich Low_complexity Low_complexity 1 24 0 5 1473 28 48 0 0 chrX 116418259 116418301 -50231995 + AT_rich Low_complexity Low_complexity 1 42 0 5 1473 2266 217 70 25 chrX 116418794 116419625 -50230671 + L1_Mur1 LINE L1 893 1782 -4095 5 1473 4094 168 52 18 chrX 116419615 116420517 -50229779 + L1_Mur1 LINE L1 2594 3526 -2351 5 1473 6953 198 26 48 chrX 116420569 116423010 -50227286 - Lx4B LINE L1 -4 7054 4679 5 1473 1046 103 7 0 chrX 116423010 116423155 -50227141 - B1_Mm SINE Alu -1 146 1 5 1473 5956 195 32 55 chrX 116423155 116423335 -50226961 - Lx4B LINE L1 -1199 4678 4497 5 1473 24 0 0 0 chrX 116423426 116423450 -50226846 + AT_rich Low_complexity Low_complexity 1 24 0 5 1473 7755 182 34 33 chrX 116423450 116425231 -50225065 + L1_Mur2 LINE L1 2995 4776 -1101 5 1473 46 0 0 0 chrX 116425674 116425720 -50224576 + AT_rich Low_complexity Low_complexity 1 46 0 5 1473 1444 272 103 13 chrX 116425877 116426353 -50223943 + Lx9 LINE L1 6306 6824 -820 5 1473 242 128 0 0 chrX 116426343 116426390 -50223906 + Lx LINE L1 6597 6643 -11 5 1473 904 130 35 23 chrX 116426390 116426563 -50223733 + L1_Mus3 LINE L1 6464 6638 0 5 1473 331 290 7 14 chrX 116426564 116426704 -50223592 + Lx9 LINE L1 6811 6949 -695 5 1473 273 327 0 53 chrX 116427217 116427330 -50222966 - MLT2C1 LTR ERVL -3 560 454 5 1473 234 302 58 12 chrX 116427712 116427883 -50222413 - L1M4 LINE L1 -3282 2864 2686 5 1473 491 319 157 39 chrX 116427935 116428349 -50221947 + Lx9 LINE L1 6974 7436 -208 5 1473 24 32 0 0 chrX 116428367 116428398 -50221898 + AT_rich Low_complexity Low_complexity 1 31 0 5 1473 7681 154 26 47 chrX 116428449 116428536 -50221760 - Lx2 LINE L1 -2 6995 6913 5 1473 4237 56 41 7 chrX 116428536 116429078 -50221218 + LTRIS2 LTR ERV1 5 564 0 5 1473 7681 157 22 40 chrX 116429078 116430667 -50219629 - Lx2 LINE L1 -85 6912 5350 5 1473 3556 110 83 19 chrX 116430668 116431307 -50218989 + Lx3_Mus LINE L1 2730 3409 -2477 5 1473 3620 95 23 0 chrX 116431306 116431961 -50218335 + Lx3_Mus LINE L1 5338 6022 -987 5 1473 223 233 0 0 chrX 116431974 116432017 -50218279 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1473 26 30 0 0 chrX 116432070 116432103 -50218193 + AT_rich Low_complexity Low_complexity 1 33 0 5 1473 311 310 91 37 chrX 116432181 116432422 -50217874 - L1M4 LINE L1 -3528 2618 2365 5 1473 385 316 65 34 chrX 116432535 116432948 -50217348 - L1MA5 LINE L1 -17 6283 5858 5 1473 1859 203 38 0 chrX 116433278 116433623 -50216673 - Lx4A LINE L1 -548 6510 6153 5 1473 24 0 0 0 chrX 116434413 116434437 -50215859 + AT_rich Low_complexity Low_complexity 1 24 0 5 1473 3603 153 7 5 chrX 116434533 116435131 -50215165 + Lx LINE L1 5770 6368 -286 5 1473 4746 157 25 65 chrX 116435135 116436075 -50214221 + RLTR13D6 LTR ERVK 1 902 0 5 1473 1326 174 14 21 chrX 116436077 116436365 -50213931 + Lx LINE L1 6369 6654 0 5 1473 1051 344 144 41 chrX 116436388 116436669 -50213627 - Lx7 LINE L1 -379 7317 6994 5 1473 344 89 51 0 chrX 116436669 116436748 -50213548 + (TA)n Simple_repeat Simple_repeat 2 84 0 5 1473 1051 344 144 41 chrX 116436748 116437472 -50212824 - Lx7 LINE L1 -703 6993 6208 5 1473 339 200 40 13 chrX 116437484 116437560 -50212736 + RLTR15 LTR ERVK 282 359 0 5 1473 3790 5 0 0 chrX 116437633 116438056 -50212240 + L1Md_A LINE L1 6160 6582 0 5 1473 2834 143 0 27 chrX 116438226 116438708 -50211588 - Lx LINE L1 -10 6644 6176 5 1473 298 267 13 51 chrX 116439111 116439190 -50211106 + B1_Mur4 SINE Alu 33 108 -42 5 1473 21 0 0 0 chrX 116439342 116439363 -50210933 + AT_rich Low_complexity Low_complexity 1 21 0 5 1473 545 160 0 9 chrX 116439363 116439470 -50210826 + (TA)n Simple_repeat Simple_repeat 2 107 0 5 1473 376 303 8 76 chrX 116439536 116439654 -50210642 + B1_Mus1 SINE Alu 19 128 -20 5 1473 808 279 83 59 chrX 116439665 116440122 -50210174 + MYSERV-int LTR ERVK 5426 5893 -657 5 1473 3713 187 34 54 chrX 116440125 116440975 -50209321 - Lx3_Mus LINE L1 -393 6616 5784 5 1473 225 245 81 106 chrX 116440975 116441098 -50209198 - Zaphod DNA Tip100 -2174 1857 1738 5 1473 1322 175 0 0 chrX 116441098 116441321 -50208975 - Lx3_Mus LINE L1 -225 5661 5439 5 1473 2592 158 51 23 chrX 116441321 116441795 -50208501 - Lx LINE L1 -1 6653 6167 5 1473 1910 200 32 9 chrX 116441796 116442197 -50208099 + L1_Mur3 LINE L1 4801 5204 -679 5 1473 217 0 0 131 chrX 116442197 116442281 -50208015 + (CAAAT)n Simple_repeat Simple_repeat 2 74 0 5 1473 3593 213 63 80 chrX 116442281 116443096 -50207200 + L1_Mur3 LINE L1 3758 4623 -1257 5 1473 387 127 0 0 chrX 116443096 116443159 -50207137 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 1473 3593 213 63 80 chrX 116443159 116443603 -50206693 + L1_Mur3 LINE L1 4624 4996 -884 5 1473 1526 168 0 0 chrX 116443608 116443858 -50206438 + L1Md_T LINE L1 382 631 -5985 5 1473 23950 81 39 145 chrX 116443855 116449542 -50200754 + L1Md_T LINE L1 505 5586 -297 5 1473 7460 38 54 17 chrX 116449542 116450491 -50199805 + L1Md_T LINE L1 5587 6570 -12 5 1473 13036 70 2 32 chrX 116450491 116453008 -50197288 - L1Md_F LINE L1 -2983 2900 462 5 1473 2298 78 0 0 chrX 116453016 116453311 -50196985 + L1_Mus1 LINE L1 6145 6439 -128 5 1473 2612 231 21 68 chrX 116453560 116454234 -50196062 - RLTR26 LTR ERVK 0 642 1 5 1473 358 349 39 39 chrX 116455491 116455673 -50194623 + B3A SINE B2 1 182 -16 5 1473 429 70 0 0 chrX 116455701 116455758 -50194538 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 1473 6038 223 31 8 chrX 116455855 116457218 -50193078 + Lx4B LINE L1 5660 7054 -4 5 1473 570 228 20 13 chrX 116457323 116457474 -50192822 + Lx3B LINE L1 6820 6971 -2 5 1473 33 43 0 0 chrX 116457480 116457527 -50192769 + AT_rich Low_complexity Low_complexity 1 47 0 5 1473 21 71 0 0 chrX 116458744 116458786 -50191510 + AT_rich Low_complexity Low_complexity 1 42 0 5 1473 35 24 0 0 chrX 116458941 116458983 -50191313 + AT_rich Low_complexity Low_complexity 1 42 0 6 1473 1253 213 139 6 chrX 116459625 116459970 -50190326 - Lx5 LINE L1 -938 6112 5722 6 1473 6232 167 8 11 chrX 116459974 116461111 -50189185 - Lx LINE L1 -1 6653 5517 6 1473 207 0 0 0 chrX 116461111 116461134 -50189162 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 1473 1904 216 30 0 chrX 116461134 116461173 -50189123 - Lx LINE L1 -361 5516 5468 6 1473 5532 167 12 43 chrX 116461168 116462293 -50188003 - Lx LINE L1 -751 5126 4037 6 1473 1287 107 17 2 chrX 116462291 116462500 -50187796 + L1MEe LINE L1 1053 1243 -1469 6 1473 6302 154 27 5 chrX 116462499 116463806 -50186490 + Lx LINE L1 5314 6650 -4 6 1473 799 208 98 5 chrX 116463833 116464036 -50186260 - L1_Mur2 LINE L1 -4311 1566 1345 6 1473 347 326 32 14 chrX 116464898 116465119 -50185177 + L1M2 LINE L1 5569 5793 -498 6 1473 21 0 0 0 chrX 116465141 116465162 -50185134 + AT_rich Low_complexity Low_complexity 1 21 0 6 1473 41 36 0 0 chrX 116465581 116465636 -50184660 + AT_rich Low_complexity Low_complexity 1 55 0 6 1473 29 47 0 0 chrX 116466580 116466623 -50183673 + AT_rich Low_complexity Low_complexity 1 43 0 6 1473 459 0 0 0 chrX 116466892 116466943 -50183353 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1473 22 0 0 0 chrX 116467356 116467378 -50182918 + AT_rich Low_complexity Low_complexity 1 22 0 6 1473 514 140 10 10 chrX 116467765 116467828 -50182468 + polypurine Low_complexity Low_complexity 2 64 0 6 1473 1128 119 0 0 chrX 116467828 116468005 -50182291 + (GAA)n Simple_repeat Simple_repeat 2 178 0 6 1473 514 140 10 10 chrX 116468005 116468042 -50182254 + polypurine Low_complexity Low_complexity 65 102 0 6 1473 1078 38 12 25 chrX 116468059 116468222 -50182074 + (GGAGA)n Simple_repeat Simple_repeat 4 164 0 6 1473 252 395 17 9 chrX 116468224 116468272 -50182024 - RSINE1 SINE B4 -43 122 12 6 1473 253 306 0 0 chrX 116468272 116468334 -50181962 - tRNA-Thr-ACG_ tRNA tRNA -11 66 5 6 1473 23 68 0 0 chrX 116468523 116468567 -50181729 + AT_rich Low_complexity Low_complexity 1 44 0 6 1473 517 318 15 19 chrX 116469105 116469310 -50180986 + MER3 DNA MER1_type 1 204 -5 6 1473 21 57 0 0 chrX 116469476 116469511 -50180785 + AT_rich Low_complexity Low_complexity 1 35 0 6 1473 2952 107 74 2 chrX 116470189 116470649 -50179647 - L1_Mus3 LINE L1 -6 6632 6140 6 1473 4839 128 69 88 chrX 116470649 116471354 -50178942 - L1VL1 LINE L1 -1763 4120 3380 6 1473 410 82 0 32 chrX 116471354 116471417 -50178879 - B1_Mus2 SINE Alu -86 61 1 6 1473 350 172 0 0 chrX 116471361 116471425 -50178871 - B4A SINE B4 -151 141 78 6 1473 4839 128 69 88 chrX 116471425 116471692 -50178604 - L1VL1 LINE L1 -1763 3379 3098 6 1473 3540 199 49 24 chrX 116471692 116472526 -50177770 + RLTR13A LTR ERVK 1 855 0 6 1473 8379 160 4 162 chrX 116472526 116474899 -50175397 - L1VL1 LINE L1 -2780 3103 1066 6 1473 2966 68 5 10 chrX 116474899 116475297 -50174999 - MTA_Mm LTR MaLR 0 396 1 6 1473 4226 175 55 37 chrX 116475297 116475952 -50174344 - L1VL1 LINE L1 -5573 1065 437 6 1473 1743 141 3 67 chrX 116476068 116476411 -50173885 - L1Md_F3 LINE L1 -1 6583 6263 6 1473 180 268 89 0 chrX 116476937 116476993 -50173303 + MIR SINE MIR 84 144 -118 6 1473 1078 90 0 0 chrX 116477521 116477666 -50172630 + B1_Mm SINE Alu 1 145 -2 6 1473 195 114 0 0 chrX 116477673 116477708 -50172588 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1473 34298 50 4 9 chrX 116477750 116482729 -50167567 + L1Md_F2 LINE L1 643 5586 -297 6 1473 7713 58 3 8 chrX 116482730 116483717 -50166579 + L1Md_F2 LINE L1 5588 6569 -13 6 1473 604 331 96 28 chrX 116483867 116484190 -50166106 - ORR1D2 LTR MaLR -20 350 6 6 1473 26 50 0 0 chrX 116484607 116484647 -50165649 + AT_rich Low_complexity Low_complexity 1 40 0 6 1473 302 0 26 0 chrX 116485036 116485074 -50165222 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 1473 4752 212 42 161 chrX 116485985 116488059 -50162237 - L1_Mur3 LINE L1 -620 5260 3435 6 1473 405 248 31 44 chrX 116488065 116488090 -50162206 - L1_Mur3 LINE L1 -2964 2913 2886 6 1473 288 0 0 0 chrX 116488090 116488122 -50162174 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 1473 3464 18 2 0 chrX 116488122 116488516 -50161780 + MTA_Mm LTR MaLR 1 395 -1 6 1473 531 0 0 0 chrX 116488516 116488575 -50161721 + (TA)n Simple_repeat Simple_repeat 1 59 0 6 1473 5252 127 68 12 chrX 116488575 116489471 -50160825 - Lx3_Mus LINE L1 -11 6998 6053 6 1473 405 248 31 44 chrX 116489471 116489602 -50160694 - L1_Mur3 LINE L1 -2992 2885 2759 6 1473 3142 139 58 8 chrX 116490145 116490313 -50159983 - RMER17D2 LTR ERVK -192 617 449 6 1473 180 0 0 0 chrX 116490313 116490333 -50159963 + (CAGA)n Simple_repeat Simple_repeat 2 21 0 6 1473 3142 139 58 8 chrX 116490333 116490752 -50159544 - RMER17D2 LTR ERVK -361 448 2 6 1473 1092 207 0 9 chrX 116490992 116491216 -50159080 + ORR1A1 LTR MaLR 1 222 -124 6 1473 24 32 0 0 chrX 116491337 116491368 -50158928 + AT_rich Low_complexity Low_complexity 1 31 0 6 1473 189 0 53 53 chrX 116491546 116491584 -50158712 + (TTTTTG)n Simple_repeat Simple_repeat 5 42 0 6 1473 1068 102 0 0 chrX 116491584 116491731 -50158565 - B1_Mus1 SINE Alu 0 148 2 6 1473 258 273 22 22 chrX 116491838 116491928 -50158368 - L1MC1 LINE L1 -184 6149 6060 6 1473 201 121 0 0 chrX 116492019 116492052 -50158244 + (T)n Simple_repeat Simple_repeat 1 33 0 6 1473 891 178 0 0 chrX 116492114 116492288 -50158008 + CT-rich Low_complexity Low_complexity 2 175 0 6 1473 1483 189 36 19 chrX 116492301 116492608 -50157688 - Lx3B LINE L1 -1 6972 6661 6 1473 6870 131 5 1 chrX 116492614 116493823 -50156473 + Lx3_Mus LINE L1 4794 6006 -1003 6 1473 2713 21 2 237 chrX 116493823 116494333 -50155963 + RLTR10 LTR ERVK 1 390 0 6 1473 16911 21 6 1 chrX 116494343 116496278 -50154018 + RLTR10-int LTR ERVK 41 1984 -3 6 1473 2741 16 2 237 chrX 116496280 116496790 -50153506 + RLTR10 LTR ERVK 1 390 0 6 1473 2355 145 40 22 chrX 116496790 116497240 -50153056 + Lx3_Mus LINE L1 5993 6450 -523 6 1473 639 277 104 21 chrX 116497242 116497578 -50152718 - L1MC1 LINE L1 -429 5904 5541 6 1473 45 79 0 0 chrX 116497831 116497932 -50152364 + AT_rich Low_complexity Low_complexity 1 101 0 6 1473 2765 72 0 0 chrX 116498056 116498415 -50151881 + L1_Mus1 LINE L1 6209 6567 0 6 1473 210 37 0 0 chrX 116498463 116498490 -50151806 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1473 350 342 34 54 chrX 116498574 116498778 -50151518 - MER73 LTR ERVL -276 368 169 6 1473 349 110 0 27 chrX 116500000 116500075 -50150221 + (TTTTG)n Simple_repeat Simple_repeat 3 75 0 1 1473 443 324 12 75 chrX 116500186 116500346 -50149950 + B3 SINE B2 65 214 -2 2 1473 1347 72 0 0 chrX 116500790 116500970 -50149326 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1473 880 302 302 28 chrX 116501161 116501442 -50148854 + RMER15 LTR ERVL 31 389 -186 4 1473 3283 40 0 2 chrX 116501442 116501839 -50148457 - MTA_Mm LTR MaLR 0 396 1 5 1473 880 328 9 38 chrX 116501839 116501971 -50148325 + RMER15 LTR ERVL 390 517 -58 4 1473 1173 272 32 26 chrX 116502434 116502743 -50147553 - MTC LTR MaLR 0 421 111 6 1473 2258 256 16 5 chrX 116502743 116503304 -50146992 + Lx3C LINE L1 6384 6950 -26 7 1473 235 341 63 0 chrX 116503318 116503444 -50146852 - MTC LTR MaLR -287 134 1 6 1473 935 179 129 0 chrX 116503575 116503776 -50146520 - Lx LINE L1 0 6654 6428 8 1473 2220 137 6 6 chrX 116503772 116504132 -50146164 - Lx2 LINE L1 -498 6499 6140 9 1473 1279 168 0 0 chrX 116504122 116504342 -50145954 + Lx2 LINE L1 5907 6126 -871 9 1473 585 170 6 12 chrX 116504615 116504782 -50145514 + (TA)n Simple_repeat Simple_repeat 2 167 0 1 1473 23 86 0 0 chrX 116504785 116504843 -50145453 + AT_rich Low_complexity Low_complexity 1 58 0 1 1473 26 0 0 0 chrX 116504952 116504978 -50145318 + AT_rich Low_complexity Low_complexity 1 26 0 1 1473 1413 316 61 47 chrX 116504993 116505718 -50144578 + Lx8 LINE L1 6385 7119 -354 1 1473 2558 94 11 3 chrX 116505849 116506222 -50144074 + L1_Mus3 LINE L1 6255 6630 -8 1 1473 457 167 0 0 chrX 116506310 116506382 -50143914 + MTC LTR MaLR 1 72 -349 1 1473 765 200 14 7 chrX 116506384 116506530 -50143766 + RMER20B LTR ERVK 4 150 -477 1 1473 1119 162 0 19 chrX 116506571 116506778 -50143518 + Lx2 LINE L1 6794 6996 -1 9 1473 3084 204 81 17 chrX 116506781 116507484 -50142812 + MTC-int LTR MaLR 511 1258 0 1 1473 1698 195 146 0 chrX 116507484 116507848 -50142448 + MTC LTR MaLR 1 417 -4 1 1473 221 119 0 23 chrX 116507942 116507985 -50142311 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1473 21 0 0 0 chrX 116508023 116508044 -50142252 + AT_rich Low_complexity Low_complexity 1 21 0 1 1473 3003 190 65 51 chrX 116508051 116508684 -50141612 + RLTR26 LTR ERVK 1 642 0 2 1473 1114 165 60 0 chrX 116508717 116508917 -50141379 - Lx2 LINE L1 -12 6985 6774 2 1473 180 229 93 67 chrX 116509378 116509453 -50140843 - L2 LINE L2 -1277 2142 2066 2 1473 321 118 0 0 chrX 116509891 116509942 -50140354 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 1473 22 56 0 0 chrX 116509955 116509991 -50140305 + AT_rich Low_complexity Low_complexity 1 36 0 2 1473 1284 231 59 19 chrX 116510754 116511076 -50139220 - RMER4B LTR ERVK -9 576 242 2 1473 1059 209 30 37 chrX 116511075 116511344 -50138952 - RMER4B LTR ERVK -276 309 43 2 1473 4231 115 11 2 chrX 116511345 116511973 -50138323 - L1_Mus4 LINE L1 -1 6635 6002 2 1473 31 26 0 0 chrX 116511995 116512033 -50138263 + AT_rich Low_complexity Low_complexity 1 38 0 2 1473 4631 117 31 0 chrX 116512033 116512743 -50137553 - Lx3_Mus LINE L1 0 7009 6278 2 1473 314 219 26 0 chrX 116512779 116512930 -50137366 + (TA)n Simple_repeat Simple_repeat 1 155 0 3 1473 197 369 52 15 chrX 116513077 116513212 -50137084 - L2 LINE L2 -1956 1463 1324 2 1473 26 88 0 0 chrX 116514452 116514520 -50135776 + AT_rich Low_complexity Low_complexity 1 68 0 3 1473 234 379 11 0 chrX 116515287 116515374 -50134922 - ID_B1 SINE B4 -3 221 134 3 1473 371 80 0 0 chrX 116515374 116515424 -50134872 - L1_Mus1 LINE L1 -160 6407 6358 3 1473 847 136 0 25 chrX 116515424 116515583 -50134713 + L1Md_F2 LINE L1 6426 6580 -2 3 1473 264 154 0 0 chrX 116515706 116515758 -50134538 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1473 239 177 16 0 chrX 116516566 116516628 -50133668 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 1473 516 288 67 20 chrX 116516733 116516928 -50133368 - Lx8 LINE L1 -451 7022 6819 3 1473 886 332 189 2 chrX 116516939 116517394 -50132902 - Lx8 LINE L1 -710 6763 6224 3 1473 46 54 0 0 chrX 116517423 116517497 -50132799 + AT_rich Low_complexity Low_complexity 1 74 0 3 1473 3766 74 4 0 chrX 116517870 116518369 -50131927 + L1Md_F2 LINE L1 5086 5586 -297 3 1473 7495 64 1 6 chrX 116518369 116519355 -50130941 + L1Md_F2 LINE L1 5587 6567 -15 3 1473 390 320 79 25 chrX 116519515 116519901 -50130395 - Lx8 LINE L1 -1584 5889 5509 3 1473 429 213 10 78 chrX 116519901 116520003 -50130293 - B1_Mur2 SINE Alu -50 99 5 4 1473 404 104 0 15 chrX 116520158 116520226 -50130070 + (TATG)n Simple_repeat Simple_repeat 2 68 0 4 1473 708 297 44 16 chrX 116520294 116520609 -50129687 - L1M2 LINE L1 -1091 5052 4729 4 1473 279 114 0 0 chrX 116520939 116520983 -50129313 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1473 263 226 8 0 chrX 116522313 116522401 -50127895 + L1_Mur2 LINE L1 915 1069 -6659 4 1473 3097 78 58 0 chrX 116522418 116522890 -50127406 - L1_Mus1 LINE L1 -524 6043 5545 4 184 3716 82 4 0 chrX 116522890 116523387 -50126909 + L1_Mus1 LINE L1 6068 6566 -1 4 1474 900 283 83 0 chrX 116523571 116523836 -50126460 + Lx6 LINE L1 7145 7431 -29 4 1474 540 0 0 0 chrX 116523836 116523896 -50126400 + (TAAA)n Simple_repeat Simple_repeat 3 62 0 4 1474 964 179 22 3 chrX 116523907 116524227 -50126069 + L1_Mur2 LINE L1 1103 1427 -4450 4 1474 8213 49 2 2 chrX 116524222 116525370 -50124926 - L1Md_F2 LINE L1 -570 6012 4870 4 1474 4554 56 5 23 chrX 116525370 116525973 -50124323 + L1Md_F2 LINE L1 5991 6582 0 4 1474 2927 233 21 25 chrX 116525973 116526619 -50123677 + L1_Mur2 LINE L1 1418 2061 -3816 4 1474 327 49 0 0 chrX 116526619 116526660 -50123636 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1474 2927 233 21 25 chrX 116526660 116526794 -50123502 + L1_Mur2 LINE L1 2062 2196 -3681 4 1474 1207 77 29 0 chrX 116527325 116527495 -50122801 - L1_Mus4 LINE L1 -154 6482 6308 5 1474 301 59 0 0 chrX 116527495 116527546 -50122750 + L1_Mus4 LINE L1 6583 6633 -3 5 1474 9925 203 67 38 chrX 116527762 116528422 -50121874 + L1_Mur2 LINE L1 2208 2861 -3016 4 1474 1124 95 0 6 chrX 116528422 116528591 -50121705 + (GAAA)n Simple_repeat Simple_repeat 2 169 0 5 1474 9925 203 67 38 chrX 116528591 116529142 -50121154 + L1_Mur2 LINE L1 2862 3469 -2408 4 1474 306 0 0 0 chrX 116529142 116529176 -50121120 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1474 9925 203 67 38 chrX 116529176 116530691 -50119605 + L1_Mur2 LINE L1 3470 5015 -862 4 1474 1574 134 0 0 chrX 116530707 116530954 -50119342 - L1_Mur1 LINE L1 -3336 2550 2304 5 1474 393 22 0 0 chrX 116531393 116531439 -50118857 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 1474 188 143 0 58 chrX 116532123 116532175 -50118121 + T-rich Low_complexity Low_complexity 3 51 0 5 1474 961 116 7 0 chrX 116532176 116532322 -50117974 - B1_Mus1 SINE Alu -1 147 1 5 1474 294 268 45 23 chrX 116532444 116532532 -50117764 - Lx8 LINE L1 -346 7127 7038 5 1474 29 0 0 0 chrX 116532729 116532758 -50117538 + AT_rich Low_complexity Low_complexity 1 29 0 5 1474 21 71 0 0 chrX 116533131 116533173 -50117123 + AT_rich Low_complexity Low_complexity 1 42 0 5 1474 11234 219 55 28 chrX 116533515 116534838 -50115458 - Lx5 LINE L1 -281 6719 5302 6 1474 288 0 0 0 chrX 116534838 116534870 -50115426 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1474 11234 198 41 52 chrX 116534870 116536159 -50114137 - Lx5 LINE L1 -576 5301 4069 6 1474 522 31 0 0 chrX 116536159 116536223 -50114073 + (TG)n Simple_repeat Simple_repeat 1 64 0 6 1474 11234 198 41 52 chrX 116536223 116537307 -50112989 - Lx5 LINE L1 -1809 4068 2957 6 1474 22 35 0 0 chrX 116537336 116537365 -50112931 + AT_rich Low_complexity Low_complexity 1 29 0 6 1474 22 0 0 0 chrX 116537567 116537589 -50112707 + AT_rich Low_complexity Low_complexity 1 22 0 6 1474 21 0 0 0 chrX 116537689 116537710 -50112586 + AT_rich Low_complexity Low_complexity 1 21 0 6 1474 3939 161 21 21 chrX 116537713 116538418 -50111878 - Lx3B LINE L1 -5 6968 6264 6 1474 593 181 0 7 chrX 116538850 116538989 -50111307 + (CA)n Simple_repeat Simple_repeat 2 139 0 6 1474 333 0 0 0 chrX 116539049 116539086 -50111210 + (TA)n Simple_repeat Simple_repeat 1 37 0 6 1474 198 0 0 0 chrX 116539134 116539156 -50111140 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 6 1474 1096 92 0 0 chrX 116539159 116539301 -50110995 - B1_Mus1 SINE Alu -6 142 1 7 1474 25 0 0 0 chrX 116539416 116539441 -50110855 + AT_rich Low_complexity Low_complexity 1 25 0 7 1474 669 310 29 24 chrX 116540312 116540520 -50109776 + B3 SINE B2 8 216 0 7 1474 22 0 0 0 chrX 116541396 116541418 -50108878 + AT_rich Low_complexity Low_complexity 1 22 0 7 1474 27 29 0 0 chrX 116541458 116541492 -50108804 + AT_rich Low_complexity Low_complexity 1 34 0 7 1474 714 72 0 0 chrX 116542268 116542365 -50107931 + (TTTC)n Simple_repeat Simple_repeat 4 100 0 7 1474 328 331 58 11 chrX 116542557 116542731 -50107565 - B3A SINE B2 -16 182 1 7 1474 26 0 0 0 chrX 116542767 116542793 -50107503 + AT_rich Low_complexity Low_complexity 1 26 0 7 1474 1186 65 0 29 chrX 116542877 116543052 -50107244 + L1Md_F2 LINE L1 6394 6563 -19 7 1474 386 114 14 0 chrX 116543304 116543374 -50106922 + (TA)n Simple_repeat Simple_repeat 2 72 0 7 1474 213 39 0 0 chrX 116543501 116543527 -50106769 + (TCTA)n Simple_repeat Simple_repeat 1 26 0 8 1474 214 182 23 0 chrX 116543562 116543580 -50106716 + (TATATG)n Simple_repeat Simple_repeat 6 24 0 8 1474 798 303 64 53 chrX 116543580 116543939 -50106357 - ORR1D2 LTR MaLR -4 366 4 8 1474 214 182 23 0 chrX 116543939 116543964 -50106332 + (TATATG)n Simple_repeat Simple_repeat 5 29 0 8 1474 1099 342 27 27 chrX 116544018 116544137 -50106159 + Lx8 LINE L1 6249 6360 -1113 8 1474 2100 246 29 21 chrX 116544137 116544699 -50105597 + RMER2 LTR ERV1 1 566 -1 8 1474 1099 342 27 27 chrX 116544699 116545093 -50105203 + Lx8 LINE L1 6361 6761 -712 8 1474 2049 68 32 4 chrX 116545293 116545571 -50104725 - L1_Mus1 LINE L1 -227 6340 6055 8 1474 1812 76 0 0 chrX 116545571 116545808 -50104488 + L1_Mus1 LINE L1 6331 6567 0 8 1474 596 253 10 17 chrX 116545833 116545985 -50104311 - MTD LTR MaLR -86 333 161 8 1474 813 332 90 61 chrX 116545993 116546943 -50103353 + Lx9 LINE L1 6493 7471 -2 8 1474 332 244 78 0 chrX 116547223 116547338 -50102958 + Lx9 LINE L1 7477 7600 -44 8 1474 479 189 33 0 chrX 116547626 116547716 -50102580 + RMER6C LTR ERVK 1 93 -597 8 1474 40138 17 2 6 chrX 116547726 116553786 -50096510 - L1Md_A LINE L1 0 6582 556 9 1474 522 163 54 47 chrX 116553826 116553955 -50096341 + RMER6C LTR ERVK 208 337 -353 8 1474 1278 113 19 10 chrX 116553957 116554163 -50096133 - MusHAL1 LINE L1 -893 1819 1612 9 1474 6472 108 24 6 chrX 116554165 116554207 -50096089 + L1_Mus4 LINE L1 5645 5684 -952 9 1474 4502 73 2 5 chrX 116554207 116554796 -50095500 - LTRIS_Mus LTR ERV1 0 587 1 9 1474 6472 108 24 6 chrX 116554796 116555725 -50094571 + L1_Mus4 LINE L1 5685 6633 -3 9 1474 351 243 10 0 chrX 116555750 116555853 -50094443 + (CAGTT)n Simple_repeat Simple_repeat 2 105 0 9 1474 674 194 30 0 chrX 116555907 116556041 -50094255 + RMER6C LTR ERVK 500 637 -53 8 1474 11128 102 37 6 chrX 116556041 116557818 -50092478 - L1_Mur1 LINE L1 -1442 4444 2614 9 1474 8328 134 27 11 chrX 116557813 116559168 -50091128 + Lx3A LINE L1 5606 6981 0 9 1474 413 198 35 0 chrX 116559203 116559289 -50091007 + RMER6D LTR ERVK 583 671 -85 9 1474 622 278 71 11 chrX 116559273 116559455 -50090841 + RMER6D LTR ERVK 528 720 0 9 1474 434 291 158 30 chrX 116559456 116559818 -50090478 + L1M5 LINE L1 2739 3146 -3000 9 1474 387 113 0 0 chrX 116559941 116560003 -50090293 + (TG)n Simple_repeat Simple_repeat 2 63 0 9 1474 4417 96 28 2 chrX 116560170 116560789 -50089507 - Lx3_Mus LINE L1 0 7009 6375 1 1474 4158 148 7 19 chrX 116561312 116561329 -50088967 - Lx2 LINE L1 -330 6667 6653 1 1474 4687 159 98 11 chrX 116561329 116562211 -50088085 + RMER17B LTR ERVK 1 958 0 1 1474 4158 148 7 19 chrX 116562211 116562222 -50088074 - Lx2 LINE L1 -345 6652 6644 1 1474 1172 179 0 9 chrX 116562222 116562447 -50087849 - Lx2 LINE L1 0 6997 6775 1 1474 4158 148 7 19 chrX 116562447 116563136 -50087160 - Lx2 LINE L1 -354 6643 5958 1 1474 2634 168 26 2 chrX 116563135 116563630 -50086666 - L1_Mm LINE L1 -771 5112 4606 1 1474 283 23 0 43 chrX 116563896 116563942 -50086354 + (TAA)n Simple_repeat Simple_repeat 3 46 0 1 1474 432 0 0 0 chrX 116565146 116565194 -50085102 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1474 21 57 0 0 chrX 116565849 116565884 -50084412 + AT_rich Low_complexity Low_complexity 1 35 0 1 1474 34 42 0 0 chrX 116566279 116566327 -50083969 + AT_rich Low_complexity Low_complexity 1 48 0 1 1474 29 28 0 0 chrX 116566448 116566484 -50083812 + AT_rich Low_complexity Low_complexity 1 36 0 1 1474 21 0 0 0 chrX 116566516 116566537 -50083759 + AT_rich Low_complexity Low_complexity 1 21 0 1 1474 12664 110 48 40 chrX 116566951 116568577 -50081719 - L1_Mus1 LINE L1 -1 6566 4871 1 1474 246 260 78 29 chrX 116568577 116568680 -50081616 + MER72B LTR ERV1 280 387 -381 1 1474 12664 110 48 40 chrX 116568680 116569800 -50080496 - L1_Mus1 LINE L1 -1 4870 3700 1 1474 6813 62 0 1 chrX 116569795 116570661 -50079635 - L1Md_F2 LINE L1 -1 6581 5717 1 1474 705 70 9 0 chrX 116570667 116570781 -50079515 + L1Md_F3 LINE L1 6470 6584 0 1 1474 1386 144 36 8 chrX 116570781 116571033 -50079263 - L1_Mur1 LINE L1 -1221 4665 4407 1 1474 1794 334 46 28 chrX 116571040 116572003 -50078293 - Lx8 LINE L1 -149 7324 6345 1 1474 292 182 9 0 chrX 116572447 116572509 -50077787 - B1F SINE Alu -2 147 83 1 1474 407 343 76 34 chrX 116573842 116574316 -50075980 + L2 LINE L2 2286 2779 -640 1 1474 3729 63 0 6 chrX 116574330 116574806 -50075490 - L1_Mus1 LINE L1 -3 6564 6092 1 1474 3633 156 51 52 chrX 116574806 116575871 -50074425 + RLTR13D1 LTR ERVK 1 1023 0 1 1474 3640 74 0 0 chrX 116575871 116576346 -50073950 - L1_Mus1 LINE L1 -470 6097 5623 1 1474 1541 302 123 23 chrX 116576379 116577401 -50072895 - Lx5 LINE L1 -51 7409 6058 1 1474 525 321 48 48 chrX 116577412 116577749 -50072547 - RLTR15 LTR ERVK -22 337 1 1 1474 4123 200 27 14 chrX 116577764 116578071 -50072225 - Lx5 LINE L1 -1010 6040 5726 1 1474 3520 78 2 0 chrX 116578071 116578533 -50071763 - L1_Mus1 LINE L1 0 6567 6105 1 1474 4123 209 54 10 chrX 116578533 116579382 -50070914 - Lx5 LINE L1 -155 5725 4831 1 1474 192 40 0 0 chrX 116579585 116579610 -50070686 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 1474 601 311 106 34 chrX 116579613 116579937 -50070359 - MT2B LTR ERVL -70 531 43 1 1474 332 257 9 54 chrX 116579938 116580049 -50070247 - MT2B LTR ERVL -425 108 3 1 1474 348 355 29 22 chrX 116580874 116581012 -50069284 - RSINE1 SINE B4 0 165 27 1 1474 22 35 0 0 chrX 116583396 116583425 -50066871 + AT_rich Low_complexity Low_complexity 1 29 0 1 1474 320 351 96 53 chrX 116583724 116584100 -50066196 - MLT1L LTR MaLR -14 596 205 1 1474 32 43 0 0 chrX 116584237 116584283 -50066013 + AT_rich Low_complexity Low_complexity 1 46 0 1 1474 21 71 0 0 chrX 116584865 116584907 -50065389 + AT_rich Low_complexity Low_complexity 1 42 0 1 1474 358 310 176 56 chrX 116585042 116585449 -50064847 - MER44B DNA MER2_type -81 469 14 1 1474 608 375 30 17 chrX 116585705 116586001 -50064295 + MTE2b LTR MaLR 3 302 -77 1 1474 22 80 0 0 chrX 116586393 116586443 -50063853 + AT_rich Low_complexity Low_complexity 1 50 0 1 1474 420 20 0 0 chrX 116586679 116586728 -50063568 + (CATA)n Simple_repeat Simple_repeat 2 50 0 1 1474 1236 308 40 42 chrX 116586773 116586969 -50063327 + MTD LTR MaLR 3 195 -224 1 1474 312 70 0 0 chrX 116586969 116587012 -50063284 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 1474 1236 308 40 42 chrX 116587012 116587219 -50063077 + MTD LTR MaLR 196 404 -15 1 1474 354 169 0 0 chrX 116587296 116587361 -50062935 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 1474 28 71 0 0 chrX 116587592 116587648 -50062648 + AT_rich Low_complexity Low_complexity 1 56 0 1 1474 238 355 83 21 chrX 116588275 116588419 -50061877 - B3 SINE B2 0 216 64 1 1474 729 0 0 0 chrX 116588519 116588600 -50061696 + (TTTTA)n Simple_repeat Simple_repeat 2 82 0 1 1474 495 261 30 23 chrX 116588600 116588733 -50061563 - B1_Mur2 SINE Alu -12 137 4 1 1474 372 22 0 0 chrX 116589339 116589384 -50060912 + (TTG)n Simple_repeat Simple_repeat 2 46 0 1 1474 36 23 0 0 chrX 116589886 116589929 -50060367 + AT_rich Low_complexity Low_complexity 1 43 0 1 1474 31 26 0 0 chrX 116590374 116590412 -50059884 + AT_rich Low_complexity Low_complexity 1 38 0 1 1474 416 360 17 17 chrX 116590618 116590799 -50059497 - Tigger5 DNA MER2_type -2174 232 52 1 1474 247 234 119 18 chrX 116591129 116591238 -50059058 - Lx8 LINE L1 -5 7468 7349 1 1474 708 238 43 72 chrX 116591401 116591480 -50058816 - ORR1D1 LTR MaLR -170 204 128 1 1474 1703 170 27 62 chrX 116591480 116591818 -50058478 - ORR1A3 LTR MaLR 0 326 1 1 1474 708 238 43 72 chrX 116591818 116591946 -50058350 - ORR1D1 LTR MaLR -247 127 3 1 1474 3964 269 51 35 chrX 116591948 116593293 -50057003 - ORR1D1-int LTR MaLR 0 1370 5 1 1474 1030 279 26 22 chrX 116593299 116593611 -50056685 - ORR1D1 LTR MaLR -2 372 60 1 1474 1917 187 25 67 chrX 116593789 116594149 -50056147 + ORR1B1 LTR MaLR 1 353 -41 1 1474 1074 102 0 0 chrX 116594149 116594296 -50056000 + B1_Mus1 SINE Alu 1 147 -1 1 1474 1917 187 25 67 chrX 116594296 116594341 -50055955 + ORR1B1 LTR MaLR 354 389 -5 1 1474 21 0 0 0 chrX 116594473 116594494 -50055802 + AT_rich Low_complexity Low_complexity 1 21 0 1 1474 858 329 7 7 chrX 116594767 116595061 -50055235 - Lx6 LINE L1 -26 7434 7141 1 1474 2961 76 2 8 chrX 116597855 116598253 -50052043 - MTA_Mm LTR MaLR 0 396 1 1 1474 7536 89 8 6 chrX 116598253 116599349 -50050947 - MTA_Mm-int LTR MaLR 0 1098 1 1 1474 2758 87 10 18 chrX 116599349 116599748 -50050548 - MTA_Mm LTR MaLR 0 396 1 1 1474 1476 223 27 24 chrX 116599857 116600085 -50050211 - L1_Mur2 LINE L1 -152 5725 5489 1 1474 8002 30 1 3 chrX 116600085 116601016 -50049280 + RLTR13B3 LTR ERVK 1 929 0 1 1474 1476 223 27 24 chrX 116601016 116601118 -50049178 - L1_Mur2 LINE L1 -389 5488 5394 1 1474 1204 347 46 16 chrX 116601325 116602101 -50048195 + Lx9 LINE L1 6611 7410 -234 1 1474 21 36 0 0 chrX 116602723 116602751 -50047545 + AT_rich Low_complexity Low_complexity 1 28 0 1 1474 444 233 85 85 chrX 116603016 116603180 -50047116 + RMER21B LTR ERV1 347 510 -332 1 1474 252 0 0 0 chrX 116603199 116603227 -50047069 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1 1474 236 102 20 0 chrX 116603231 116603280 -50047016 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 1 1474 872 343 46 20 chrX 116603350 116603808 -50046488 - Lx8 LINE L1 -33 7440 6971 1 1474 22 0 0 0 chrX 116603997 116604019 -50046277 + AT_rich Low_complexity Low_complexity 1 22 0 1 1474 380 274 103 9 chrX 116604020 116604127 -50046169 - PB1D9 SINE Alu -1 119 3 1 1474 276 77 0 0 chrX 116604431 116604470 -50045826 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 1474 27 0 0 0 chrX 116605370 116605397 -50044899 + AT_rich Low_complexity Low_complexity 1 27 0 1 1474 1964 164 2 49 chrX 116605560 116605990 -50044306 + RMER17C LTR ERVK 1 410 0 1 1474 28 48 0 0 chrX 116607469 116607511 -50042785 + AT_rich Low_complexity Low_complexity 1 42 0 1 1474 335 311 148 11 chrX 116607755 116608025 -50042271 - L1MD1 LINE L1 -256 5986 5680 1 1474 414 151 0 0 chrX 116608089 116608162 -50042134 + (TA)n Simple_repeat Simple_repeat 1 73 0 1 1474 3091 258 31 7 chrX 116608191 116608898 -50041398 - Lx5 LINE L1 -4 7046 6323 1 1474 1031 268 30 18 chrX 116608909 116609243 -50041053 - Lx5 LINE L1 -822 6228 5891 1 1474 1797 99 4 33 chrX 116609253 116609525 -50040771 - L1_Mus1 LINE L1 -1 6566 6303 1 1474 4064 83 2 7 chrX 116609525 116610077 -50040219 + L1_Mus2 LINE L1 5132 5681 -202 1 1474 2500 136 2 2 chrX 116610078 116610476 -50039820 + L1_Mus2 LINE L1 5829 6226 -340 1 1474 1577 181 58 0 chrX 116610465 116610864 -50039432 - Lx4A LINE L1 -1153 5905 5465 1 1474 313 148 66 0 chrX 116610864 116610925 -50039371 + RLTR9F LTR ERVK 1 65 -350 1 1474 509 261 65 72 chrX 116610930 116611236 -50039060 + ETnERV2-int LTR ERVK 17 320 -2994 1 1474 459 35 0 0 chrX 116611238 116611295 -50039001 + (TAAAA)n Simple_repeat Simple_repeat 1 57 0 1 1474 561 55 0 0 chrX 116611401 116611474 -50038822 + (TAAAA)n Simple_repeat Simple_repeat 4 76 0 1 1474 8700 156 44 22 chrX 116611474 116613985 -50036311 + ETnERV2-int LTR ERVK 723 4083 -3323 1 1474 7245 129 12 50 chrX 116613981 116615193 -50035103 + ETnERV2-int LTR ERVK 5260 6425 -981 1 1474 330 169 41 27 chrX 116615407 116615480 -50034816 + ETnERV2-int LTR ERVK 7331 7404 -2 1 1474 1839 184 25 25 chrX 116615481 116615883 -50034413 + RLTR9D LTR ERVK 1 402 -1 1 1474 1130 204 89 24 chrX 116615885 116616177 -50034119 - Lx4A LINE L1 -414 5463 5153 1 1474 37889 31 1 0 chrX 116616175 116623224 -50027072 - L1Md_T LINE L1 0 6585 1 1 1474 9612 195 69 97 chrX 116623202 116625444 -50024852 - L1_Mur2 LINE L1 -691 5186 3052 1 1474 207 0 0 0 chrX 116625444 116625467 -50024829 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1474 9612 195 69 97 chrX 116625467 116626170 -50024126 - L1_Mur2 LINE L1 -2826 3051 2323 1 1474 887 349 50 2 chrX 116626191 116626628 -50023668 - Lx8 LINE L1 -656 6817 6360 1 1474 23 0 0 0 chrX 116626704 116626727 -50023569 + AT_rich Low_complexity Low_complexity 1 23 0 1 1474 235 265 134 24 chrX 116627088 116627297 -50022999 - L1M3 LINE L1 -2098 4042 3811 1 1474 24 53 0 0 chrX 116627689 116627727 -50022569 + AT_rich Low_complexity Low_complexity 1 38 0 1 1474 1414 117 0 0 chrX 116627967 116628172 -50022124 - L1_Mus2 LINE L1 0 6566 6362 1 1474 35 24 0 0 chrX 116628466 116628508 -50021788 + AT_rich Low_complexity Low_complexity 1 42 0 1 1474 2944 196 101 2 chrX 116628946 116629563 -50020733 + RLTR33 LTR ERVK 1 678 0 1 1474 26 0 0 0 chrX 116629605 116629631 -50020665 + AT_rich Low_complexity Low_complexity 1 26 0 1 1474 720 129 0 0 chrX 116629676 116629800 -50020496 + (TG)n Simple_repeat Simple_repeat 1 124 0 1 1474 21 0 0 0 chrX 116630420 116630441 -50019855 + AT_rich Low_complexity Low_complexity 1 21 0 1 1474 6875 114 2 32 chrX 116631154 116632220 -50018076 + L1_Mus3 LINE L1 5598 6631 -7 1 1474 3511 124 20 4 chrX 116632344 116632896 -50017400 + Lx3_Mus LINE L1 6449 7009 0 1 1474 671 289 9 10 chrX 116634168 116634376 -50015920 - Lx6 LINE L1 -656 6394 6156 1 1474 3640 166 34 31 chrX 116634376 116634924 -50015372 + RMER6A LTR ERVK 51 579 -177 1 1474 287 25 25 0 chrX 116634924 116634964 -50015332 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 1 1474 3640 166 34 31 chrX 116634964 116635119 -50015177 + RMER6A LTR ERVK 580 755 -1 1 1474 1431 237 39 32 chrX 116635122 116635528 -50014768 - Lx6 LINE L1 -1288 6172 5764 1 1474 651 233 58 43 chrX 116635533 116635587 -50014709 + Lx6 LINE L1 6694 6757 -703 1 1474 351 0 0 0 chrX 116635587 116635626 -50014670 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1474 1561 290 18 15 chrX 116635626 116636180 -50014116 + Lx6 LINE L1 6455 7370 -90 1 1474 796 208 13 0 chrX 116636864 116637023 -50013273 - RMER1B Other Other -197 869 709 1 1474 696 304 59 48 chrX 116637287 116637687 -50012609 - RMER13A LTR ERVK -408 500 58 2 1474 1560 182 12 78 chrX 116637683 116638028 -50012268 + ORR1A4 LTR MaLR 8 329 0 2 1474 767 309 118 29 chrX 116638053 116638601 -50011695 - RMER1A Other Other -579 451 1 2 1474 3079 237 56 38 chrX 116638661 116639424 -50010872 + RMER21A LTR ERV1 94 870 -77 2 1474 801 264 180 4 chrX 116639431 116639703 -50010593 - RMER1B Other Other -801 541 44 1 1474 734 301 5 5 chrX 116640557 116640771 -50009525 + B3 SINE B2 1 214 -2 2 1474 614 274 13 25 chrX 116640822 116640979 -50009317 + Lx8 LINE L1 6219 6373 -1100 2 1474 1114 36 0 0 chrX 116640980 116641118 -50009178 + B1_Mus2 SINE Alu 10 147 0 2 1474 354 317 47 23 chrX 116641140 116641311 -50008985 + Lx8 LINE L1 6371 6545 -928 2 1474 216 0 0 0 chrX 116641409 116641433 -50008863 + (TA)n Simple_repeat Simple_repeat 2 25 0 2 1474 322 261 16 108 chrX 116641823 116641952 -50008344 - PB1D9 SINE Alu -3 117 1 2 1474 324 120 0 0 chrX 116642041 116642091 -50008205 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 1474 391 370 77 22 chrX 116642167 116642581 -50007715 + L1MC4 LINE L1 7369 7805 -237 2 1474 1134 77 0 0 chrX 116642846 116642989 -50007307 + B1_Mus1 SINE Alu 1 143 -5 2 1474 261 304 24 37 chrX 116643599 116643681 -50006615 + ID4 SINE ID 3 83 0 2 1474 354 23 0 0 chrX 116644297 116644340 -50005956 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1474 421 194 19 6 chrX 116644424 116644510 -50005786 - Lx5 LINE L1 -362 6688 6614 2 1474 4330 191 88 55 chrX 116644510 116645497 -50004799 + RLTR25A LTR ERVK 1 1024 -79 2 1474 3724 136 11 17 chrX 116645497 116646132 -50004164 + Lx LINE L1 6024 6654 0 2 1474 4330 191 88 55 chrX 116646132 116646212 -50004084 + RLTR25A LTR ERVK 1025 1103 0 2 1474 604 250 7 7 chrX 116646212 116646353 -50003943 - Lx5 LINE L1 -431 6619 6479 2 1474 501 88 0 0 chrX 116646352 116646420 -50003876 - Lx5 LINE L1 -1174 5876 5809 2 1474 2240 193 12 26 chrX 116646419 116646526 -50003770 - Lx5 LINE L1 -152 6898 6798 2 1474 2994 93 5 0 chrX 116646526 116646945 -50003351 + BGLII LTR ERVK 1 421 0 2 1474 2240 193 12 26 chrX 116646945 116647262 -50003034 - Lx5 LINE L1 -253 6797 6480 2 1474 25 0 0 0 chrX 116647470 116647495 -50002801 + AT_rich Low_complexity Low_complexity 1 25 0 2 1474 7599 147 65 12 chrX 116647495 116647608 -50002688 - Lx2 LINE L1 -1 6996 6866 2 1474 203 61 30 0 chrX 116647608 116647641 -50002655 + (CCCA)n Simple_repeat Simple_repeat 3 36 0 2 1474 7599 152 55 10 chrX 116647641 116649216 -50001080 - Lx2 LINE L1 -132 6865 5236 2 1474 643 12 0 23 chrX 116649422 116649508 -50000788 + (TTTC)n Simple_repeat Simple_repeat 2 85 0 2 1474 2009 183 2 44 chrX 116649528 116649934 -50000362 - Lx4A LINE L1 -1 7057 6669 2 1474 309 294 0 0 chrX 116649991 116650144 -50000152 + (TA)n Simple_repeat Simple_repeat 2 154 0 2 1474 249 83 0 0 chrX 116650144 116650180 -50000116 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1474 309 294 0 0 chrX 116650180 116650189 -50000107 + (TA)n Simple_repeat Simple_repeat 1 9 0 2 1474 376 259 17 0 chrX 116651407 116651523 -49998773 - L1M2 LINE L1 -795 5505 5388 2 1474 342 152 0 0 chrX 116651621 116651680 -49998616 + (TTG)n Simple_repeat Simple_repeat 2 60 0 2 1474 462 36 0 0 chrX 116651691 116651747 -49998549 + (TAG)n Simple_repeat Simple_repeat 1 56 0 2 1474 309 358 0 0 chrX 116651761 116651842 -49998454 - PB1D10 SINE Alu -29 88 8 2 1474 318 157 0 0 chrX 116652366 116652449 -49997847 + (TA)n Simple_repeat Simple_repeat 1 83 0 2 1474 284 78 39 0 chrX 116652450 116652501 -49997795 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 2 1474 23 92 0 0 chrX 116652708 116652773 -49997523 + AT_rich Low_complexity Low_complexity 1 65 0 2 1474 300 214 126 59 chrX 116652931 116653050 -49997246 - Lx7 LINE L1 -3 7693 7567 2 1474 3472 168 65 18 chrX 116653056 116653730 -49996566 + Lx2B LINE L1 6295 7000 0 2 1474 414 0 0 0 chrX 116653776 116653822 -49996474 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 184 1869 162 85 13 chrX 116653879 116654267 -49996029 - RMER17D2 LTR ERVK 0 809 394 2 1475 1037 117 0 0 chrX 116654454 116654599 -49995697 - B1_Mus2 SINE Alu 0 147 3 2 1475 3838 137 26 0 chrX 116654613 116655228 -49995068 - Lx2 LINE L1 0 6997 6367 2 1475 323 159 26 9 chrX 116655701 116655815 -49994481 + (TA)n Simple_repeat Simple_repeat 2 117 0 2 1475 1217 140 35 0 chrX 116656258 116656458 -49993838 - Lx2 LINE L1 -16 6981 6775 2 1475 2073 159 5 32 chrX 116656458 116656700 -49993596 - Lx2 LINE L1 -354 6643 6412 2 1475 4595 114 125 10 chrX 116656700 116657509 -49992787 - RMER17A2 LTR ERVK -4 902 1 2 1475 2073 159 5 32 chrX 116657509 116657637 -49992659 - Lx2 LINE L1 -586 6411 6283 2 1475 939 306 30 29 chrX 116658045 116658502 -49991794 + Lx8 LINE L1 5431 5920 -1553 2 1475 1670 138 4 0 chrX 116658749 116659009 -49991287 - Lx LINE L1 -7 6647 6387 2 1475 872 86 0 0 chrX 116659021 116659138 -49991158 - Lx LINE L1 -645 6009 5893 2 1475 1814 288 45 16 chrX 116659317 116660364 -49989932 - Lx7 LINE L1 -1290 6406 5352 2 1475 809 332 91 31 chrX 116660506 116660923 -49989373 - Lx8 LINE L1 -153 7320 6879 2 1475 675 25 0 0 chrX 116661061 116661142 -49989154 + (TG)n Simple_repeat Simple_repeat 2 82 0 2 1475 263 365 0 0 chrX 116661146 116661231 -49989065 - MLT1A0 LTR MaLR -72 293 209 2 1475 584 169 8 0 chrX 116661858 116661988 -49988308 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 2 1475 350 343 139 35 chrX 116662038 116662700 -49987596 - Lx7 LINE L1 -1254 4892 4162 2 1475 216 0 0 0 chrX 116664560 116664584 -49985712 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1475 351 0 0 0 chrX 116664584 116664622 -49985674 + (TA)n Simple_repeat Simple_repeat 2 40 0 2 1475 21 0 0 0 chrX 116665315 116665336 -49984960 + AT_rich Low_complexity Low_complexity 1 21 0 2 1475 1144 109 39 33 chrX 116665631 116665749 -49984547 + B2_Mm2 SINE B2 2 119 -76 2 1475 3540 70 33 0 chrX 116665749 116666209 -49984087 + MT2C_Mm LTR ERVL 1 475 0 2 1475 1144 109 39 33 chrX 116666209 116666271 -49984025 + B2_Mm2 SINE B2 120 183 -12 2 1475 9532 67 1 0 chrX 116666271 116667561 -49982735 + L1Md_F2 LINE L1 4296 5586 -297 2 1475 7394 78 2 8 chrX 116667561 116668562 -49981734 + L1Md_F2 LINE L1 5587 6581 -1 2 1475 5384 171 28 18 chrX 116668562 116668812 -49981484 + L1_Mur2 LINE L1 1247 1499 -4378 2 1475 711 0 0 0 chrX 116668812 116668891 -49981405 + (GAA)n Simple_repeat Simple_repeat 3 81 0 2 1475 5384 171 28 18 chrX 116668891 116669440 -49980856 + L1_Mur2 LINE L1 1500 2059 -3818 2 1475 195 42 0 0 chrX 116669440 116669464 -49980832 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 1475 5384 171 28 18 chrX 116669464 116669869 -49980427 + L1_Mur2 LINE L1 2060 2463 -3414 2 1475 1322 130 248 0 chrX 116669866 116670121 -49980175 + L1_Mur2 LINE L1 3514 3847 -2030 2 1475 195 42 0 0 chrX 116670121 116670145 -49980151 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1475 1322 130 248 0 chrX 116670145 116670220 -49980076 + L1_Mur2 LINE L1 3848 3925 -1952 2 1475 300 338 26 0 chrX 116670385 116670462 -49979834 - ID_B1 SINE B4 -64 160 82 2 1475 667 239 162 5 chrX 116670516 116670701 -49979595 + B3 SINE B2 3 216 0 2 1475 326 314 117 56 chrX 116671091 116671253 -49979043 - B4A SINE B4 -36 256 85 2 1475 1120 90 0 28 chrX 116671255 116671437 -49978859 + (TTTTC)n Simple_repeat Simple_repeat 3 179 0 2 1475 772 99 0 34 chrX 116671437 116671584 -49978712 + (TCCCC)n Simple_repeat Simple_repeat 3 144 0 2 1475 180 111 0 0 chrX 116671595 116671622 -49978674 + (TC)n Simple_repeat Simple_repeat 1 27 0 2 1475 321 215 114 0 chrX 116671624 116671703 -49978593 - B1_Mm SINE Alu -8 139 52 2 1475 5798 14 0 0 chrX 116671722 116672416 -49977880 + L1Md_T LINE L1 4893 5586 -297 2 1475 8958 9 0 0 chrX 116672416 116673412 -49976884 + L1Md_T LINE L1 5587 6582 0 2 1475 324 277 62 21 chrX 116673547 116673643 -49976653 - ID_B1 SINE B4 -69 155 56 2 1475 250 262 112 0 chrX 116673675 116673755 -49976541 - RSINE1 SINE B4 -29 136 48 2 1475 406 230 39 29 chrX 116673883 116673986 -49976310 - B1_Mur2 SINE Alu -44 105 2 2 1475 1347 179 16 8 chrX 116674196 116674450 -49975846 + Lx4A LINE L1 6340 6595 -463 2 1475 1114 153 4 83 chrX 116674471 116674713 -49975583 - Lx2 LINE L1 0 6997 6775 2 1475 920 150 7 0 chrX 116674713 116674860 -49975436 - Lx2 LINE L1 -354 6643 6496 2 1475 3554 147 14 2 chrX 116674881 116675467 -49974829 - Lx LINE L1 -1 6653 6061 2 1475 3387 121 33 0 chrX 116675467 116676265 -49974031 + Lx LINE L1 5243 6066 -588 2 1475 1627 222 52 20 chrX 116676259 116676663 -49973633 + Lx4A LINE L1 6587 7003 -55 2 1475 368 326 120 10 chrX 116676682 116676973 -49973323 + L1M4 LINE L1 4781 5103 -1043 2 1475 255 296 0 0 chrX 116676977 116677031 -49973265 - U4 snRNA snRNA -84 61 8 2 1475 366 269 49 21 chrX 116677038 116677182 -49973114 + L1M4 LINE L1 5093 5240 -906 2 1475 4835 138 13 18 chrX 116677277 116678048 -49972248 - Lx2 LINE L1 -426 6571 5804 2 1475 2899 68 8 0 chrX 116678048 116678428 -49971868 + L1Md_F2 LINE L1 6200 6582 0 2 1475 4835 138 13 18 chrX 116678428 116678481 -49971815 - Lx2 LINE L1 -1194 5803 5751 2 1475 531 344 12 0 chrX 116678920 116679083 -49971213 + B3 SINE B2 5 169 -47 2 1475 1302 167 109 8 chrX 116679083 116679348 -49970948 - Lx2B LINE L1 -149 6851 6560 2 1475 6847 121 14 13 chrX 116679361 116681117 -49969179 + L1_Mus3 LINE L1 4874 6638 0 2 1475 230 254 0 33 chrX 116681238 116681299 -49968997 - Lx8 LINE L1 -195 7278 7220 2 1475 239 317 68 68 chrX 116681344 116681476 -49968820 - RLTR18 LTR ERVK -32 480 349 2 1475 4230 41 10 0 chrX 116681577 116682144 -49968152 + L1Md_F3 LINE L1 6062 6584 0 2 1475 35004 37 4 8 chrX 116682175 116687577 -49962719 + L1Md_T LINE L1 208 5586 -297 2 1475 8366 36 0 3 chrX 116687577 116688576 -49961720 + L1Md_T LINE L1 5587 6582 0 2 1475 6911 40 2 5 chrX 116688579 116689424 -49960872 + L1Md_T LINE L1 5739 6581 -1 2 1475 6986 39 1 3 chrX 116689427 116690273 -49960023 + L1Md_T LINE L1 5739 6582 0 2 1475 6958 42 1 1 chrX 116690276 116691120 -49959176 + L1Md_T LINE L1 5739 6582 0 2 1475 282 281 0 0 chrX 116691121 116691185 -49959111 - RLTR18 LTR ERVK -280 336 273 2 1475 666 192 42 0 chrX 116691185 116691305 -49958991 - RLTR18 LTR ERVK -472 144 20 2 1475 2048 218 28 60 chrX 116691392 116692175 -49958121 + RMER6C LTR ERVK 45 755 -1 2 1475 339 340 60 25 chrX 116692256 116692657 -49957639 + MTD LTR MaLR 1 415 -4 2 1475 780 42 0 0 chrX 116692710 116692806 -49957490 + (CA)n Simple_repeat Simple_repeat 1 96 0 2 1475 477 34 0 0 chrX 116692806 116692864 -49957432 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 1475 1623 171 3 64 chrX 116692864 116693176 -49957120 - ORR1A3 LTR MaLR -33 293 1 2 1475 654 49 0 0 chrX 116693199 116693281 -49957015 + (TA)n Simple_repeat Simple_repeat 2 83 0 2 1475 5498 107 8 7 chrX 116693603 116694452 -49955844 - L1Md_F2 LINE L1 -3 6579 5730 2 1475 4032 221 27 42 chrX 116694751 116695805 -49954491 + Lx2B LINE L1 5849 6886 -114 2 1475 7503 50 9 4 chrX 116696459 116697511 -49952785 - L1Md_F2 LINE L1 -1 6581 5519 2 1475 3162 219 51 25 chrX 116697724 116698674 -49951622 - Lx7 LINE L1 -1717 5979 5026 2 1475 2276 109 74 95 chrX 116699309 116699794 -49950502 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1475 5612 48 13 12 chrX 116699794 116700539 -49949757 - IAPEz-int LTR ERVK 0 6481 5736 2 1475 2104 68 0 0 chrX 116700538 116700816 -49949480 - IAPEz-int LTR ERVK -4845 1636 1359 2 1475 1045 51 72 54 chrX 116700816 116700982 -49949314 - IAPEz-int LTR ERVK -5819 662 494 2 1475 2303 121 78 50 chrX 116700983 116701445 -49948851 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1475 14017 53 5 4 chrX 116701445 116703269 -49947027 - IAPEz-int LTR ERVK 0 6481 4656 2 1475 1695 111 8 0 chrX 116703268 116703520 -49946776 - IAPEz-int LTR ERVK -5183 2497 2244 2 1475 884 67 0 0 chrX 116703515 116703634 -49946662 - IAPEz-int LTR ERVK -5004 1477 1359 2 1475 3451 61 1 16 chrX 116703634 116704265 -49946031 - IAPEz-int LTR ERVK -5819 662 116 2 1475 1150 59 0 150 chrX 116704265 116704485 -49945811 - IAPEz-int LTR ERVK -6286 195 9 2 1475 3059 85 65 2 chrX 116704486 116704933 -49945363 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1475 1218 211 102 0 chrX 116705359 116705644 -49944652 + MTC LTR MaLR 1 314 -107 3 1475 1767 252 99 17 chrX 116705680 116706414 -49943882 + MTC-int LTR MaLR 2 1258 0 3 1475 339 260 39 57 chrX 116706414 116706583 -49943713 + MTC LTR MaLR 1 156 -240 3 1475 29164 95 13 6 chrX 116706583 116711626 -49938670 + L1Md_F LINE L1 507 5587 -296 3 1475 8129 46 3 1 chrX 116711626 116712621 -49937675 + L1Md_F3 LINE L1 5588 6584 0 3 1475 1939 79 0 4 chrX 116712628 116712894 -49937402 + L1Md_F2 LINE L1 5321 5585 -298 3 1475 7017 89 5 25 chrX 116712895 116713894 -49936402 + L1Md_F2 LINE L1 5587 6565 -17 3 1475 351 289 0 0 chrX 116713911 116714015 -49936281 + MTC LTR MaLR 110 213 -208 3 1475 5818 97 10 58 chrX 116714015 116715121 -49935175 - L1_Mur3 LINE L1 -2181 3699 2656 3 1475 1538 119 45 0 chrX 116715118 116715362 -49934934 + Lx2 LINE L1 6389 6643 -354 3 1475 1412 129 0 0 chrX 116715362 116715579 -49934717 + Lx2 LINE L1 6775 6991 -6 3 1475 538 246 57 0 chrX 116715608 116715730 -49934566 + MTC LTR MaLR 197 325 -96 3 1475 4165 76 14 4 chrX 116715799 116716357 -49933939 - L1Md_F2 LINE L1 -3 6579 6016 3 1475 1252 94 0 0 chrX 116716358 116716538 -49933758 + L1Md_F2 LINE L1 5827 6006 -576 3 1475 240 397 25 0 chrX 116716977 116717176 -49933120 - Lx8 LINE L1 -223 7250 7047 3 1475 289 271 77 66 chrX 116717395 116717486 -49932810 - B3 SINE B2 0 216 125 3 1475 1984 200 39 10 chrX 116717608 116718003 -49932293 - MTC LTR MaLR 0 421 16 3 1475 241 26 26 26 chrX 116718003 116718042 -49932254 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1475 1984 200 39 10 chrX 116718042 116718055 -49932241 - MTC LTR MaLR -406 15 2 3 1475 36 97 0 0 chrX 116719031 116719144 -49931152 + AT_rich Low_complexity Low_complexity 1 113 0 3 1475 796 223 40 6 chrX 116719260 116719436 -49930860 - RMER6C LTR ERVK -508 182 1 3 1475 969 252 90 10 chrX 116721241 116721756 -49928540 + Lx9 LINE L1 6305 6860 -784 3 1475 783 310 97 59 chrX 116722072 116722719 -49927577 - L1M2 LINE L1 -860 5283 4612 3 1475 33 66 0 0 chrX 116722750 116722811 -49927485 + AT_rich Low_complexity Low_complexity 1 61 0 3 1475 1250 361 29 31 chrX 116722847 116723106 -49927190 + MTE-int LTR MaLR 638 894 -686 3 1475 1093 68 0 40 chrX 116723106 116723258 -49927038 - B1_Mm SINE Alu 0 147 2 3 1475 1250 361 29 31 chrX 116723258 116723513 -49926783 + MTE-int LTR MaLR 895 1151 -429 3 1475 472 65 0 0 chrX 116723513 116723575 -49926721 - L1Md_F2 LINE L1 -234 6348 6287 3 1475 1483 118 0 0 chrX 116723575 116723824 -49926472 + L1Md_F2 LINE L1 6360 6582 0 3 1475 21 0 0 0 chrX 116723906 116723927 -49926369 + AT_rich Low_complexity Low_complexity 1 21 0 3 1475 2267 118 3 0 chrX 116724086 116724418 -49925878 - Lx2 LINE L1 -1047 5950 5618 3 1475 5221 177 33 7 chrX 116724419 116725421 -49924875 + Lx2 LINE L1 5964 6991 -6 3 1475 182 83 0 53 chrX 116725425 116725463 -49924833 + (CAAAC)n Simple_repeat Simple_repeat 2 37 0 3 1475 452 351 13 19 chrX 116725463 116725620 -49924676 + MTE2b LTR MaLR 24 179 -200 3 1475 1555 253 55 29 chrX 116725624 116726076 -49924220 + RMER5 LTR ERV1 1 464 -70 3 1475 258 326 35 0 chrX 116726116 116726257 -49924039 - L1_Mur3 LINE L1 -1052 4828 4683 3 1475 340 356 70 0 chrX 116726491 116726606 -49923690 - RSINE1 SINE B4 -23 142 20 3 1475 7255 86 2 22 chrX 116726611 116727736 -49922560 - L1_Mus2 LINE L1 0 6566 5461 3 1475 213 146 0 0 chrX 116727981 116728029 -49922267 + (TAAAAA)n Simple_repeat Simple_repeat 5 52 0 3 1475 266 353 32 48 chrX 116729105 116729230 -49921066 + MTE-int LTR MaLR 645 767 -813 3 1475 1414 256 82 14 chrX 116729244 116729597 -49920699 - MTD LTR MaLR -42 377 1 3 1475 2553 91 74 8 chrX 116729636 116730014 -49920282 + RLTR9D LTR ERVK 1 403 0 3 1475 21 36 0 0 chrX 116730101 116730129 -49920167 + AT_rich Low_complexity Low_complexity 1 28 0 3 1475 298 298 54 97 chrX 116730300 116730486 -49919810 - B2_Mm2 SINE B2 -4 191 14 3 1475 366 376 28 7 chrX 116730606 116730890 -49919406 - B4A SINE B4 -2 290 1 3 1475 294 331 103 7 chrX 116731523 116731678 -49918618 + L1M3a LINE L1 153 322 -5745 3 1475 6528 136 53 5 chrX 116732228 116734009 -49916287 - Lx LINE L1 0 6654 4781 3 1475 23 54 0 0 chrX 116734089 116734126 -49916170 + AT_rich Low_complexity Low_complexity 1 37 0 3 1475 462 322 19 48 chrX 116734165 116734502 -49915794 + L1M3a LINE L1 4708 5036 -1107 3 1475 5262 92 114 29 chrX 116734907 116735162 -49915134 - RLTR13D6 LTR ERVK 0 902 665 3 1475 1108 96 0 0 chrX 116735162 116735308 -49914988 + B1_Mus2 SINE Alu 2 147 0 3 1475 5262 92 114 29 chrX 116735308 116735883 -49914413 - RLTR13D6 LTR ERVK -238 664 1 3 1475 247 441 91 27 chrX 116736187 116736485 -49913811 - MLT-int LTR MaLR -740 995 679 3 1475 31 0 0 0 chrX 116736658 116736689 -49913607 + AT_rich Low_complexity Low_complexity 1 31 0 3 1475 7277 211 41 33 chrX 116737228 116737916 -49912380 + Lx7 LINE L1 2637 3322 -2558 3 1475 180 0 0 0 chrX 116737916 116737936 -49912360 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 1475 7277 211 41 33 chrX 116737936 116738221 -49912075 + Lx7 LINE L1 3323 3604 -2276 3 1475 3890 136 33 6 chrX 116738221 116738866 -49911430 - Lx3_Mus LINE L1 -13 6996 6335 3 1475 7277 211 41 33 chrX 116738866 116739913 -49910383 + Lx7 LINE L1 3605 4674 -1206 3 1475 23 54 0 0 chrX 116740056 116740093 -49910203 + AT_rich Low_complexity Low_complexity 1 37 0 3 1475 3560 112 19 2 chrX 116740093 116740622 -49909674 - Lx LINE L1 -12 6642 6105 3 1475 2257 205 133 30 chrX 116741485 116741696 -49908600 + Lx7 LINE L1 5017 5259 -621 3 1475 234 91 0 0 chrX 116741696 116741729 -49908567 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1475 2257 205 133 30 chrX 116741729 116742018 -49908278 + Lx7 LINE L1 5260 5602 -278 3 1475 3088 100 30 7 chrX 116742018 116742482 -49907814 + MT2C_Mm LTR ERVL 1 475 0 3 1475 2257 261 175 35 chrX 116742482 116743162 -49907134 + Lx7 LINE L1 5603 6404 -1292 3 1475 351 0 0 0 chrX 116743162 116743201 -49907095 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1475 1828 259 71 29 chrX 116743201 116743452 -49906844 + Lx7 LINE L1 6405 6668 -1028 3 1475 2163 209 68 12 chrX 116743452 116743950 -49906346 + RLTR20B3 LTR ERVK 1 526 -51 3 1475 603 177 113 0 chrX 116744314 116744438 -49905858 + Lx7 LINE L1 7559 7696 0 3 1475 32 57 0 0 chrX 116744443 116744496 -49905800 + AT_rich Low_complexity Low_complexity 1 53 0 3 1475 255 316 25 12 chrX 116744602 116744682 -49905614 - ID2 SINE ID 0 83 3 3 1475 2607 269 107 60 chrX 116745041 116745621 -49904675 - ORR1B2-int LTR MaLR -192 1178 511 3 1475 1752 113 0 34 chrX 116745621 116745913 -49904383 - Lx LINE L1 -5 6649 6368 3 1475 2607 269 107 60 chrX 116745913 116746458 -49903838 - ORR1B2-int LTR MaLR -860 510 1 3 1475 1719 191 55 9 chrX 116746462 116746805 -49903491 - ORR1B2 LTR MaLR -8 359 1 3 1475 232 323 92 29 chrX 116746885 116747092 -49903204 + L1M4 LINE L1 5464 5683 -495 3 1475 438 289 89 9 chrX 116747250 116747463 -49902833 + L1M5 LINE L1 5330 5559 -603 3 1475 29 90 0 0 chrX 116747572 116747650 -49902646 + AT_rich Low_complexity Low_complexity 1 78 0 3 1475 467 222 69 39 chrX 116748081 116748227 -49902069 - Lx7 LINE L1 -2 7694 7560 3 1475 920 348 11 136 chrX 116748493 116748649 -49901647 + RMER1B Other Other 1 96 -970 3 1475 1038 82 0 0 chrX 116748649 116748784 -49901512 - B1_Mm SINE Alu -12 135 1 3 1475 920 338 18 122 chrX 116748784 116749352 -49900944 + RMER1B Other Other 18 533 -533 3 1475 237 292 14 14 chrX 116749322 116749395 -49900901 + RMER1A Other Other 286 358 -672 3 1475 622 342 102 4 chrX 116749463 116749689 -49900607 + RMER1A Other Other 194 441 -589 3 1475 261 0 0 0 chrX 116749751 116749780 -49900516 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1475 1387 228 63 45 chrX 116749901 116750282 -49900014 + ORR1B1 LTR MaLR 5 392 -2 3 1475 21 0 0 0 chrX 116750452 116750473 -49899823 + AT_rich Low_complexity Low_complexity 1 21 0 3 1475 21 0 0 0 chrX 116751255 116751276 -49899020 + AT_rich Low_complexity Low_complexity 1 21 0 3 1475 561 68 0 0 chrX 116751505 116751579 -49898717 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 3 1475 285 29 0 0 chrX 116751688 116751722 -49898574 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 1475 327 105 0 0 chrX 116751722 116751779 -49898517 + (GA)n Simple_repeat Simple_repeat 2 58 0 3 1475 384 324 38 0 chrX 116751842 116751947 -49898349 - B3A SINE B2 -84 114 6 3 1475 262 195 23 0 chrX 116752084 116752171 -49898125 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 3 1475 351 0 0 0 chrX 116752171 116752210 -49898086 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1475 495 118 0 0 chrX 116752494 116752570 -49897726 + (TA)n Simple_repeat Simple_repeat 2 77 0 3 1475 28 48 0 0 chrX 116752596 116752638 -49897658 + AT_rich Low_complexity Low_complexity 1 42 0 3 1475 3153 202 37 11 chrX 116752640 116753282 -49897014 - Lx4A LINE L1 -3 7055 6397 3 1475 573 207 0 0 chrX 116753285 116753406 -49896890 - Lx4A LINE L1 -1005 6053 5933 3 1475 2657 196 82 42 chrX 116753412 116753529 -49896767 - Lx4A LINE L1 -428 5449 5311 3 1475 3482 154 46 9 chrX 116753529 116754158 -49896138 - Lx LINE L1 -6 6648 5997 3 1475 2657 196 82 42 chrX 116754158 116754752 -49895544 - Lx4A LINE L1 -567 5310 4710 3 1475 6309 115 36 14 chrX 116754746 116756348 -49893948 - L1_Mus2 LINE L1 -2 6564 4938 3 1475 9784 119 20 5 chrX 116756340 116757869 -49892427 + L1_Mus2 LINE L1 3380 4930 -953 3 1475 10728 156 97 68 chrX 116757867 116759180 -49891116 - Lx4A LINE L1 -1136 4741 3308 3 1475 369 0 0 0 chrX 116759180 116759221 -49891075 + (ATTG)n Simple_repeat Simple_repeat 4 44 0 3 1475 10728 156 97 68 chrX 116759221 116760530 -49889766 - Lx4A LINE L1 -2570 3307 2042 3 1475 450 79 0 0 chrX 116760530 116760593 -49889703 + (TG)n Simple_repeat Simple_repeat 1 63 0 3 1475 906 10 0 0 chrX 116760593 116760695 -49889601 + (GA)n Simple_repeat Simple_repeat 1 103 0 3 1475 10728 156 97 68 chrX 116760695 116760783 -49889513 - Lx4A LINE L1 -3836 2041 1953 3 1475 11082 70 3 4 chrX 116760775 116763139 -49887157 - L1Md_F2 LINE L1 -12 6570 4414 3 1475 7768 124 29 9 chrX 116763130 116763807 -49886489 - L1_Mur1 LINE L1 -1338 4548 3873 3 1475 1087 61 0 0 chrX 116763807 116763939 -49886357 + B1_Mm SINE Alu 3 134 -13 3 1475 423 0 0 0 chrX 116763939 116763986 -49886310 + (CAAAA)n Simple_repeat Simple_repeat 1 47 0 3 1475 7768 124 29 9 chrX 116763986 116764636 -49885660 - L1_Mur1 LINE L1 -2014 3872 3195 3 1475 384 63 0 16 chrX 116764643 116764707 -49885589 - L1_Mus2 LINE L1 -1 6565 6503 3 1475 2237 229 37 16 chrX 116764708 116765218 -49885078 - L1Md_F2 LINE L1 -6040 1046 526 3 1475 21 36 0 0 chrX 116766076 116766104 -49884192 + AT_rich Low_complexity Low_complexity 1 28 0 3 1475 31 58 0 0 chrX 116766162 116766214 -49884082 + AT_rich Low_complexity Low_complexity 1 52 0 3 1475 186 43 0 0 chrX 116766482 116766505 -49883791 + (TCTCTG)n Simple_repeat Simple_repeat 4 26 0 3 1475 228 86 0 0 chrX 116766581 116766616 -49883680 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 3 1475 532 376 36 16 chrX 116767571 116767955 -49882341 - Lx8 LINE L1 -119 7354 6963 3 1475 874 308 120 29 chrX 116767953 116768005 -49882291 - Lx8 LINE L1 -1122 6351 6298 3 1475 267 54 0 0 chrX 116768005 116768042 -49882254 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 3 1475 1370 302 72 17 chrX 116768042 116768916 -49881380 - Lx8 LINE L1 -1176 6297 5353 3 1475 24 0 0 0 chrX 116768965 116768989 -49881307 + AT_rich Low_complexity Low_complexity 1 24 0 3 1475 210 213 21 0 chrX 116769025 116769072 -49881224 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1475 22 80 0 0 chrX 116769184 116769234 -49881062 + AT_rich Low_complexity Low_complexity 1 50 0 3 1475 558 299 38 23 chrX 116769235 116769499 -49880797 + L1M2 LINE L1 5493 5760 -540 3 1475 374 19 0 19 chrX 116769796 116769855 -49880441 - B1_Mm SINE Alu 0 149 92 3 1475 274 226 32 0 chrX 116770292 116770354 -49879942 + B1_Mm SINE Alu 65 128 -19 3 1475 192 163 0 0 chrX 116770357 116770400 -49879896 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 3 1475 531 45 0 0 chrX 116770969 116771035 -49879261 + (TC)n Simple_repeat Simple_repeat 2 67 0 3 1475 195 69 0 0 chrX 116771199 116771228 -49879068 + (ATTTG)n Simple_repeat Simple_repeat 2 30 0 4 1475 231 180 80 0 chrX 116771331 116771381 -49878915 + Lx5 LINE L1 5804 5857 -1193 4 1475 2083 130 41 33 chrX 116771382 116771747 -49878549 + RLTR9A LTR ERVK 1 368 0 4 1475 3454 121 28 6 chrX 116771886 116772420 -49877876 + LTRIS2 LTR ERV1 19 564 0 4 1475 1779 145 149 12 chrX 116772982 116773317 -49876979 - RLTR9A2 LTR ERVK 0 383 3 4 1475 3381 199 53 7 chrX 116773317 116774016 -49876280 - Lx4A LINE L1 -4 7054 6324 4 1475 2166 154 3 0 chrX 116774012 116774382 -49875914 + L1_Mur2 LINE L1 4190 4560 -1317 4 1475 4366 59 2 5 chrX 116774386 116774946 -49875350 + L1Md_F2 LINE L1 6014 6571 -11 4 1475 1146 260 103 28 chrX 116774948 116775354 -49874942 + RMER16 LTR ERVK 1 533 0 4 1475 2578 144 14 0 chrX 116775354 116775798 -49874498 + L1_Mur2 LINE L1 4566 5015 -862 4 1475 12217 83 5 16 chrX 116776665 116778394 -49871902 + L1Md_F2 LINE L1 3876 5586 -297 4 1475 7356 79 1 12 chrX 116778395 116779401 -49870895 + L1Md_F2 LINE L1 5588 6582 0 4 1475 553 155 10 0 chrX 116779430 116779533 -49870763 + L1_Mur2 LINE L1 5046 5149 -728 4 1475 23 0 0 0 chrX 116779540 116779563 -49870733 + AT_rich Low_complexity Low_complexity 1 23 0 4 1475 399 331 43 16 chrX 116779934 116780118 -49870178 + Lx7 LINE L1 7038 7226 -470 4 1475 21 36 0 0 chrX 116780265 116780293 -49870003 + AT_rich Low_complexity Low_complexity 1 28 0 4 1475 807 245 19 39 chrX 116780395 116780603 -49869693 + Lx7 LINE L1 5603 5806 -1890 4 1475 5405 151 22 21 chrX 116780594 116781387 -49868909 + L1_Mur1 LINE L1 4433 5245 -641 4 1475 468 0 0 0 chrX 116781387 116781439 -49868857 + (TAA)n Simple_repeat Simple_repeat 3 54 0 4 1475 5405 151 22 21 chrX 116781439 116781677 -49868619 + L1_Mur1 LINE L1 5246 5464 -422 4 1475 5319 116 6 5 chrX 116781673 116782456 -49867840 + Lx3_Mus LINE L1 6093 6876 -133 4 1475 6828 138 15 13 chrX 116782460 116783586 -49866710 + Lx3B LINE L1 5844 6971 -2 4 1475 27 29 0 0 chrX 116783616 116783650 -49866646 + AT_rich Low_complexity Low_complexity 1 34 0 4 1475 699 270 228 0 chrX 116784030 116784271 -49866025 - ORR1C2 LTR MaLR -54 330 35 4 1475 815 286 118 61 chrX 116784281 116784788 -49865508 - Lx7 LINE L1 -38 7658 7123 4 184 2044 218 39 6 chrX 116784733 116785307 -49864989 + L1_Mur3 LINE L1 4029 4618 -1262 4 1476 313 271 31 100 chrX 116785330 116785557 -49864739 - L1MEf LINE L1 -4085 2548 2337 4 1476 35 88 0 0 chrX 116785587 116785678 -49864618 + AT_rich Low_complexity Low_complexity 1 91 0 4 1476 231 146 0 0 chrX 116786043 116786084 -49864212 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1476 232 276 143 43 chrX 116786265 116786405 -49863891 + L1M5 LINE L1 3497 3650 -2496 4 1476 1714 154 21 30 chrX 116786457 116786786 -49863510 - Lx2 LINE L1 -1 6996 6671 4 1476 23 54 0 0 chrX 116788094 116788131 -49862165 + AT_rich Low_complexity Low_complexity 1 37 0 4 1476 4094 81 24 8 chrX 116788919 116789505 -49860791 - L1Md_F2 LINE L1 -1 6581 5987 4 1476 3044 11 43 0 chrX 116789507 116789859 -49860437 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1476 55491 22 15 2 chrX 116789859 116796249 -49854047 - IAPEz-int LTR ERVK 0 6481 8 4 1476 2956 17 46 0 chrX 116796249 116796600 -49853696 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1476 8680 95 7 28 chrX 116796601 116798023 -49852273 - L1Md_F2 LINE L1 -593 5989 4602 4 1476 14131 151 6 109 chrX 116798052 116802572 -49847724 - L1Md_F2 LINE L1 0 6582 2558 4 1476 21 0 0 0 chrX 116802726 116802747 -49847549 + AT_rich Low_complexity Low_complexity 1 21 0 4 1476 281 186 14 0 chrX 116803490 116803560 -49846736 + GA-rich Low_complexity Low_complexity 4 74 0 4 1476 234 150 0 0 chrX 116803591 116803631 -49846665 + (GGAGA)n Simple_repeat Simple_repeat 2 41 0 4 1476 331 288 37 0 chrX 116803636 116803765 -49846531 - ORR1C2 LTR MaLR -198 186 41 4 1476 620 281 17 51 chrX 116804380 116804556 -49845740 - Lx6 LINE L1 -318 7142 6973 4 1476 430 242 0 0 chrX 116804547 116804638 -49845658 - Lx7 LINE L1 -836 6860 6770 4 1476 1462 212 46 9 chrX 116804675 116804998 -49845298 + ORR1B1 LTR MaLR 40 374 -20 4 1476 2815 213 37 94 chrX 116804989 116805767 -49844529 + ORR1B1-int LTR MaLR 29 762 -1201 4 1476 1021 191 116 0 chrX 116805617 116805735 -49844561 + MT2B LTR ERVL 35 175 -426 4 1476 314 265 194 10 chrX 116805735 116805838 -49844458 + B1_Mm SINE Alu 3 124 -23 4 1476 632 200 0 73 chrX 116805887 116806038 -49844258 + ORR1B1-int LTR MaLR 846 985 -978 4 1476 1408 154 124 33 chrX 116806039 116806324 -49843972 - RMER17C LTR ERVK 0 410 92 4 1476 531 0 0 0 chrX 116806324 116806383 -49843913 + (GA)n Simple_repeat Simple_repeat 1 59 0 4 1476 1408 150 153 9 chrX 116806383 116806512 -49843784 - RMER17C LTR ERVK -319 91 16 4 1476 4084 193 34 99 chrX 116806508 116807561 -49842735 + ORR1B1-int LTR MaLR 979 1963 0 4 1476 423 210 154 35 chrX 116807568 116807711 -49842585 + ORR1B1 LTR MaLR 41 200 -194 4 1476 1141 260 4 4 chrX 116807737 116807996 -49842300 - Lx6 LINE L1 -757 6703 6445 4 1476 721 257 14 5 chrX 116807993 116808208 -49842088 - L1_Mur3 LINE L1 -523 5357 5141 4 1476 204 67 0 0 chrX 116808623 116808653 -49841643 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1476 31 26 0 0 chrX 116809424 116809462 -49840834 + AT_rich Low_complexity Low_complexity 1 38 0 4 1476 3007 86 2 0 chrX 116809527 116809922 -49840374 - MTA_Mm LTR MaLR 0 396 1 4 1476 3036 132 73 12 chrX 116809924 116810490 -49839806 - MTA_Mm-int LTR MaLR -433 1359 528 4 1476 25 51 0 0 chrX 116811234 116811273 -49839023 + AT_rich Low_complexity Low_complexity 1 39 0 4 1476 387 0 0 0 chrX 116811450 116811493 -49838803 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1476 316 367 24 24 chrX 116811494 116811617 -49838679 - RSINE1 SINE B4 -40 125 3 4 1476 531 346 0 30 chrX 116812108 116812272 -49838024 + B3A SINE B2 12 170 -28 4 1476 585 0 0 0 chrX 116812290 116812355 -49837941 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1476 284 365 0 65 chrX 116812641 116812764 -49837532 - PB1D10 SINE Alu -2 115 1 4 1476 482 393 47 15 chrX 116813453 116813727 -49836569 + B4A SINE B4 6 288 -4 4 1476 23 0 0 0 chrX 116814470 116814493 -49835803 + AT_rich Low_complexity Low_complexity 1 23 0 4 1476 22 0 0 0 chrX 116814540 116814562 -49835734 + AT_rich Low_complexity Low_complexity 1 22 0 4 1476 208 370 36 18 chrX 116814762 116814872 -49835424 - MER5A DNA MER1_type -41 148 37 4 1476 1964 259 38 26 chrX 116814932 116815625 -49834671 - L1_Mur3 LINE L1 -338 5542 4842 4 1476 1534 164 25 0 chrX 116815665 116815940 -49834356 + Lx2 LINE L1 6707 6988 -9 4 1476 381 43 0 0 chrX 116815940 116815987 -49834309 + (TAAAA)n Simple_repeat Simple_repeat 4 50 0 4 1476 352 297 0 0 chrX 116815998 116816089 -49834207 + Lx7 LINE L1 5619 5709 -1987 4 1476 638 154 59 0 chrX 116816089 116816225 -49834071 + Lx LINE L1 6510 6653 -1 4 1476 23 33 0 0 chrX 116816973 116817003 -49833293 + AT_rich Low_complexity Low_complexity 1 30 0 4 1476 23 68 0 0 chrX 116817066 116817110 -49833186 + AT_rich Low_complexity Low_complexity 1 44 0 4 1476 203 237 10 30 chrX 116817732 116817832 -49832464 + T-rich Low_complexity Low_complexity 1 98 0 4 1476 1012 103 24 0 chrX 116818415 116818580 -49831716 - L1_Mus3 LINE L1 -1 6637 6469 4 1476 997 93 0 0 chrX 116818580 116818719 -49831577 + L1_Mus3 LINE L1 5790 5928 -710 4 1476 1500 181 4 0 chrX 116818806 116819071 -49831225 + L1VL1 LINE L1 1 266 -6156 4 1476 29990 98 16 6 chrX 116819071 116824074 -49826222 + L1Md_F2 LINE L1 480 5538 -345 4 1476 5226 102 3 7 chrX 116824074 116824832 -49825464 + L1Md_F2 LINE L1 5825 6579 -3 4 1476 13722 132 4 4 chrX 116824833 116826425 -49823871 + L1_Mus1 LINE L1 3702 5297 -586 4 1476 2389 47 3 0 chrX 116826425 116826723 -49823573 + L1Md_T LINE L1 6283 6581 -1 4 1476 13722 96 2 1 chrX 116826723 116827996 -49822300 + L1_Mus1 LINE L1 5298 6567 0 4 1476 9133 193 98 17 chrX 116828001 116830320 -49819976 + Lx3_Mus LINE L1 3387 5922 -1087 4 1476 279 0 0 0 chrX 116830320 116830351 -49819945 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1476 7692 146 39 20 chrX 116830351 116831407 -49818889 + Lx3_Mus LINE L1 5923 7001 -8 4 1476 3244 177 23 10 chrX 116831437 116832048 -49818248 + Lx2B LINE L1 6369 6987 -13 4 1476 180 0 0 0 chrX 116832062 116832082 -49818214 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 4 1476 972 305 20 20 chrX 116832086 116832440 -49817856 - Lx6 LINE L1 -1248 6212 5859 4 1476 414 0 0 0 chrX 116832461 116832507 -49817789 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1476 291 349 37 87 chrX 116832541 116832864 -49817432 + RLTR17 LTR ERVK 119 425 -267 4 1476 2658 217 68 16 chrX 116833156 116833821 -49816475 - Lx6 LINE L1 -40 5840 5142 4 1476 859 217 88 34 chrX 116833821 116834026 -49816270 + MERVK26-int LTR ERVK 2760 2975 -3944 4 1476 1280 250 0 7 chrX 116834005 116834299 -49815997 + MERVK26-int LTR ERVK 3214 3505 -3414 4 1476 300 53 0 0 chrX 116834488 116834526 -49815770 + (T)n Simple_repeat Simple_repeat 1 38 0 4 1476 287 49 0 24 chrX 116834562 116834604 -49815692 + (CAA)n Simple_repeat Simple_repeat 2 42 0 4 1476 27 87 0 0 chrX 116834670 116834739 -49815557 + AT_rich Low_complexity Low_complexity 1 69 0 4 1476 3602 44 0 0 chrX 116834756 116835192 -49815104 - L1Md_T LINE L1 -12 6570 6135 4 1476 362 349 42 19 chrX 116835306 116835522 -49814774 - Lx8 LINE L1 -992 6481 6261 4 1476 231 426 19 0 chrX 116836166 116836321 -49813975 - MIR SINE MIR -64 198 41 4 1476 462 18 0 0 chrX 116837188 116837243 -49813053 + (GGA)n Simple_repeat Simple_repeat 3 57 0 4 1476 221 53 53 0 chrX 116837803 116837841 -49812455 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 4 1476 1149 55 7 0 chrX 116837841 116837987 -49812309 - B1_Mm SINE Alu 0 147 1 4 1476 186 103 0 0 chrX 116839578 116839607 -49810689 + (TTTTA)n Simple_repeat Simple_repeat 5 33 0 4 1476 419 271 81 40 chrX 116839872 116840046 -49810250 + L1_Rod LINE L1 5377 5582 -295 4 1476 288 350 47 61 chrX 116840210 116840487 -49809809 + L1_Rod LINE L1 21 293 -6879 4 1476 2828 133 16 35 chrX 116840564 116841048 -49809248 + MT2C_Mm LTR ERVL 1 475 0 4 1476 5842 141 12 90 chrX 116841052 116841293 -49809003 + MTB-int LTR MaLR 3 234 -864 4 1476 273 57 0 0 chrX 116841293 116841328 -49808968 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 4 1476 5842 141 12 90 chrX 116841328 116842275 -49808021 + MTB-int LTR MaLR 235 1098 0 4 1476 1576 78 74 0 chrX 116842275 116842506 -49807790 + MTB LTR MaLR 1 248 -152 4 1476 511 286 15 15 chrX 116842507 116842713 -49807583 + L1_Rod LINE L1 2618 2823 -3024 4 1476 5295 255 89 52 chrX 116842731 116845094 -49805202 + L1_Rod LINE L1 2953 5404 -443 4 1476 1153 265 47 21 chrX 116845091 116845472 -49804824 - L1_Mur3 LINE L1 -217 5663 5273 4 1476 380 178 0 0 chrX 116845472 116845545 -49804751 + RMER16-int LTR ERVK 133 205 -5201 4 1476 6029 136 41 10 chrX 116845535 116846603 -49803693 + RMER16-int LTR ERVK 851 1951 -3455 4 1476 5020 169 125 101 chrX 116846601 116847010 -49803286 + RMER16-int LTR ERVK 2413 2869 -2537 4 1476 578 116 255 7 chrX 116847010 116847151 -49803145 - B2_Mm2 SINE B2 -9 186 11 4 1476 5020 169 125 101 chrX 116847151 116848278 -49802018 + RMER16-int LTR ERVK 2870 4130 -1276 4 1476 6480 83 0 7 chrX 116848278 116849151 -49801145 - L1Md_F2 LINE L1 -1 6581 5715 4 1476 6832 83 1 0 chrX 116849147 116850051 -49800245 + L1Md_F2 LINE L1 4801 5705 -178 4 1476 7834 123 18 15 chrX 116850051 116851283 -49799013 + RMER16-int LTR ERVK 4118 5353 -53 4 1476 864 144 23 0 chrX 116851288 116851420 -49798876 - RMER16-int LTR ERVK -837 4569 4435 4 1476 1125 179 100 108 chrX 116851480 116851854 -49798442 + RMER16 LTR ERVK 1 452 -81 4 1476 693 0 0 0 chrX 116851875 116851952 -49798344 + (GAA)n Simple_repeat Simple_repeat 1 77 0 4 1476 414 200 33 0 chrX 116851956 116852046 -49798250 - L1_Mur3 LINE L1 -754 5126 5034 4 1476 2883 67 3 0 chrX 116852328 116852703 -49797593 - L1_Mus1 LINE L1 0 6567 6192 5 1476 3562 98 2 0 chrX 116852704 116853415 -49796881 + L1_Mus1 LINE L1 5345 6056 -511 5 1476 4197 211 6 6 chrX 116853445 116854301 -49795995 - Lx4A LINE L1 -4 7054 6199 5 1476 1949 123 3 0 chrX 116854301 116854601 -49795695 - L1_Mur2 LINE L1 -121 5756 5456 5 1476 4637 137 20 46 chrX 116854615 116855566 -49794730 - L1_Mur2 LINE L1 -2165 3712 2787 5 1476 3121 157 34 6 chrX 116855566 116856090 -49794206 + Lx3A LINE L1 6440 6978 -3 5 1476 1630 236 62 16 chrX 116856099 116856533 -49793763 - RMER5 LTR ERV1 -64 470 17 5 1476 870 239 4 101 chrX 116856733 116856970 -49793326 + L1_Mur2 LINE L1 650 863 -6223 5 1476 1525 155 28 12 chrX 116856965 116857292 -49793004 + L1_Mur2 LINE L1 1712 2043 -3834 5 1476 1799 132 26 0 chrX 116857520 116857793 -49792503 - Lx3A LINE L1 -471 6510 6231 5 1476 456 19 0 0 chrX 116858217 116858270 -49792026 + (TAA)n Simple_repeat Simple_repeat 3 55 0 5 1476 595 182 49 8 chrX 116858271 116858393 -49791903 + RLTR13D3 LTR ERVK 988 1114 0 5 1476 275 246 0 30 chrX 116858769 116858836 -49791460 + RLTR42-int LTR ERVK 4510 4574 -948 5 1476 275 65 22 0 chrX 116860308 116860354 -49789942 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 5 1476 980 96 0 7 chrX 116860354 116860491 -49789805 - B1_Mus2 SINE Alu -10 137 2 5 1476 390 42 0 0 chrX 116860792 116860840 -49789456 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 1476 25 31 0 0 chrX 116860946 116860978 -49789318 + AT_rich Low_complexity Low_complexity 1 32 0 5 1476 26 0 0 0 chrX 116861080 116861106 -49789190 + AT_rich Low_complexity Low_complexity 1 26 0 5 1476 459 0 0 0 chrX 116861430 116861481 -49788815 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1476 2831 291 68 11 chrX 116861498 116862671 -49787625 - MERVL_2A-int LTR ERVL -247 5238 4087 5 1476 3005 156 50 94 chrX 116862671 116863104 -49787192 + MT2B LTR ERVL 5 446 -155 5 1476 4304 8 23 0 chrX 116863104 116863586 -49786710 - MT2_Mm LTR ERVL 0 493 1 5 1476 3005 156 50 94 chrX 116863586 116863777 -49786519 + MT2B LTR ERVL 447 601 0 5 1476 757 255 43 24 chrX 116863785 116863994 -49786302 - MERVL_2A-int LTR ERVL -1740 4021 3809 5 1476 1281 318 100 54 chrX 116864029 116864588 -49785708 - ORR1D1-int LTR MaLR -367 1003 419 5 1476 1689 221 83 8 chrX 116864591 116864987 -49785309 - Lx4B LINE L1 -49 7009 6584 5 1476 268 255 40 20 chrX 116864985 116865085 -49785211 - Lx4B LINE L1 -22 7036 6935 5 1476 4841 191 48 30 chrX 116865097 116866132 -49784164 - Lx4B LINE L1 -166 6892 5839 5 1476 1252 171 61 27 chrX 116866130 116866425 -49783871 - L1_Mur2 LINE L1 -1893 3984 3680 5 1476 300 27 0 0 chrX 116867771 116867808 -49782488 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1476 590 237 11 0 chrX 116867950 116868044 -49782252 - ORR1D1 LTR MaLR -54 330 173 5 1476 875 102 7 0 chrX 116868044 116868181 -49782115 + (GGGAGA)n Simple_repeat Simple_repeat 2 139 0 5 1476 709 258 6 30 chrX 116868181 116868349 -49781947 - ORR1D1 LTR MaLR -210 164 1 5 1476 2507 281 60 25 chrX 116868362 116869074 -49781222 - ORR1D1-int LTR MaLR -71 1299 563 5 1476 304 222 0 16 chrX 116869062 116869126 -49781170 - ORR1D1 LTR MaLR -315 63 1 5 1476 2098 291 82 13 chrX 116869316 116870003 -49780293 + Lx6 LINE L1 6572 7305 -155 5 1476 274 85 0 0 chrX 116870156 116870203 -49780093 - B1_Mus2 SINE Alu 0 147 101 5 1476 21756 169 30 5 chrX 116870203 116872745 -49777551 - L1_Mus4 LINE L1 -544 6092 3482 5 1476 194 0 39 0 chrX 116872745 116872771 -49777525 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 5 1476 21756 185 24 6 chrX 116872771 116873440 -49776856 - L1_Mus4 LINE L1 -2402 3481 2797 5 1476 261 57 0 0 chrX 116873440 116873475 -49776821 + (TTG)n Simple_repeat Simple_repeat 2 36 0 5 1476 21756 185 24 6 chrX 116873475 116874578 -49775718 - L1_Mus4 LINE L1 -3087 2796 1693 5 1476 342 0 0 0 chrX 116874578 116874616 -49775680 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1476 21756 167 130 6 chrX 116874616 116875771 -49774525 - L1_Mus4 LINE L1 -4191 1692 394 5 1476 31 0 0 0 chrX 116875952 116875983 -49774313 + AT_rich Low_complexity Low_complexity 1 31 0 5 1476 22 0 0 0 chrX 116877898 116877920 -49772376 + AT_rich Low_complexity Low_complexity 1 22 0 5 1476 913 156 33 20 chrX 116878112 116878379 -49771917 + ORR1A2 LTR MaLR 1 321 -8 5 1476 9125 165 60 24 chrX 116878390 116880283 -49770013 + ORR1A2-int LTR MaLR 2 1961 -2 5 1476 1765 150 39 0 chrX 116880285 116880592 -49769704 + ORR1A2 LTR MaLR 1 319 -8 5 1476 1171 310 32 24 chrX 116880634 116881011 -49769285 - Lx6 LINE L1 -87 7373 6994 5 1476 653 179 0 0 chrX 116881378 116881495 -49768801 + RMER6C LTR ERVK 574 690 0 5 1476 195 186 0 0 chrX 116881631 116881674 -49768622 + A-rich Low_complexity Low_complexity 2 44 0 5 1476 521 171 101 0 chrX 116882024 116882153 -49768143 + MYSERV-int LTR ERVK 2615 2756 -6203 5 1476 270 179 0 56 chrX 116882187 116882258 -49768038 + MYSERV-int LTR ERVK 4440 4506 -4453 5 1476 1246 272 12 15 chrX 116882239 116882582 -49767714 + MYSERV-int LTR ERVK 4773 5114 -1436 5 1476 889 269 28 5 chrX 116882675 116882892 -49767404 - MT2A LTR ERVL -307 226 5 5 1476 206 369 49 8 chrX 116882903 116883026 -49767270 - MER5B DNA MER1_type -6 172 45 5 1476 297 0 0 0 chrX 116883225 116883258 -49767038 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1476 215 203 15 30 chrX 116883762 116883828 -49766468 + T-rich Low_complexity Low_complexity 5 69 0 5 1476 240 35 0 0 chrX 116883903 116883932 -49766364 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 5 1476 4966 152 48 5 chrX 116883933 116884806 -49765490 - Lx3A LINE L1 -17 6964 6054 5 1476 2441 137 58 1 chrX 116884813 116885212 -49765084 + Lx8 LINE L1 5319 5735 -1738 5 1476 376 136 17 0 chrX 116885213 116885272 -49765024 + B1_Mus2 SINE Alu 87 146 -1 5 1476 294 165 0 0 chrX 116885272 116885351 -49764945 + (CCAA)n Simple_repeat Simple_repeat 1 79 0 5 1476 968 246 6 111 chrX 116885383 116885726 -49764570 + Lx3_Mus LINE L1 3 309 -6675 5 1476 4038 154 83 15 chrX 116885733 116886517 -49763779 + RMER17B LTR ERVK 1 837 -121 5 1476 18084 111 13 1 chrX 116886517 116888910 -49761386 + Lx3_Mus LINE L1 2217 4635 -1251 5 1476 231 36 0 0 chrX 116888910 116888938 -49761358 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 5 1476 17600 115 34 28 chrX 116888938 116891294 -49759002 + Lx3_Mus LINE L1 4636 7009 0 5 1476 875 302 158 23 chrX 116891842 116892184 -49758112 - MTD LTR MaLR 0 419 32 5 1476 905 157 17 0 chrX 116892228 116892406 -49757890 - Lx2A1 LINE L1 0 7008 6828 5 1476 430 320 10 0 chrX 116892466 116892563 -49757733 - RSINE1 SINE B4 -55 110 13 5 1476 340 400 163 0 chrX 116892575 116892765 -49757531 - ID_B1 SINE B4 -2 222 2 5 1476 38 0 0 0 chrX 116892949 116892987 -49757309 + AT_rich Low_complexity Low_complexity 1 38 0 5 1476 31 26 0 0 chrX 116893408 116893446 -49756850 + AT_rich Low_complexity Low_complexity 1 38 0 5 1476 32699 74 2 8 chrX 116893576 116898693 -49751603 + L1Md_F2 LINE L1 560 5588 -298 5 1476 7760 60 1 1 chrX 116898694 116899671 -49750625 + L1Md_F2 LINE L1 5590 6566 -19 5 1476 23 78 0 0 chrX 116899757 116899808 -49750488 + AT_rich Low_complexity Low_complexity 1 51 0 5 1476 331 245 10 19 chrX 116900214 116900318 -49749978 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 5 1476 486 285 80 20 chrX 116900687 116900988 -49749308 - L1MA6 LINE L1 -117 6183 5865 5 1476 657 309 31 120 chrX 116901079 116901495 -49748801 + MTEa LTR MaLR 1 379 0 5 1476 259 260 14 0 chrX 116901565 116901638 -49748658 + L1M2 LINE L1 5815 5888 -412 5 1476 1876 219 297 48 chrX 116902569 116902615 -49747681 + Lx5 LINE L1 1623 1664 -4213 5 1476 270 0 0 0 chrX 116902615 116902645 -49747651 + (TC)n Simple_repeat Simple_repeat 2 31 0 5 1476 540 0 0 0 chrX 116902645 116902704 -49747592 + (TA)n Simple_repeat Simple_repeat 1 60 0 5 1476 1876 219 297 48 chrX 116902704 116903024 -49747272 + Lx5 LINE L1 1665 2036 -3841 5 1476 286 0 43 43 chrX 116903024 116903070 -49747226 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 5 1476 1876 219 297 48 chrX 116903070 116903104 -49747192 + Lx5 LINE L1 2037 2059 -3818 5 1476 279 54 0 0 chrX 116903104 116903141 -49747155 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1476 1876 219 297 48 chrX 116903141 116903717 -49746579 + Lx5 LINE L1 2060 2844 -3033 5 1476 10995 192 21 30 chrX 116903716 116904819 -49745477 - L1_Mur1 LINE L1 -1168 4718 3643 5 1476 390 57 0 0 chrX 116904819 116904872 -49745424 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1476 10995 192 21 30 chrX 116904872 116906276 -49744020 - L1_Mur1 LINE L1 -2244 3642 2231 5 1476 2600 90 8 22 chrX 116906276 116906640 -49743656 - RLTR10D LTR ERVK 0 359 1 5 1476 48471 79 14 17 chrX 116906640 116913202 -49737094 - IAP-d-int LTR ERVK 0 6542 1 5 1476 2595 103 0 14 chrX 116913202 116913566 -49736730 - RLTR10D LTR ERVK 0 359 1 5 1476 5240 164 13 17 chrX 116913566 116914950 -49735346 - L1VL4 LINE L1 -1683 1876 499 5 1476 243 324 63 47 chrX 116914957 116915148 -49735148 - L1VL2 LINE L1 -5934 401 208 5 184 6105 225 24 66 chrX 116915282 116918164 -49732132 + Lx5 LINE L1 4288 7050 0 5 1477 22 99 0 0 chrX 116919399 116919470 -49730826 + AT_rich Low_complexity Low_complexity 1 71 0 5 1477 1093 97 0 0 chrX 116919530 116919674 -49730622 + B1_Mm SINE Alu 2 145 -2 5 1477 188 122 0 24 chrX 116919702 116919744 -49730552 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 5 1477 192 40 0 0 chrX 116919963 116919988 -49730308 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 5 1477 186 43 0 0 chrX 116920065 116920088 -49730208 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 1477 2947 243 52 83 chrX 116920399 116921133 -49729163 - Lx5 LINE L1 0 7050 6353 5 1477 2779 66 6 0 chrX 116921133 116921496 -49728800 - L1_Mus1 LINE L1 0 6567 6203 5 1477 2947 210 11 11 chrX 116921496 116921766 -49728530 - Lx5 LINE L1 -680 6378 6109 5 1477 884 202 17 6 chrX 116921764 116921943 -49728353 - Lx5 LINE L1 -234 5643 5463 5 1477 449 162 3 7 chrX 116922168 116922267 -49728029 - Lx3C LINE L1 -345 5811 5726 5 1477 2476 125 8 0 chrX 116923127 116923520 -49726776 + Lx4A LINE L1 4921 5316 -561 5 1477 246 32 0 0 chrX 116923520 116923551 -49726745 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1477 8899 10 0 0 chrX 116923664 116924900 -49725396 - L1Md_T LINE L1 0 6582 5347 5 1477 7675 181 25 5 chrX 116924900 116926620 -49723676 + Lx4A LINE L1 5303 7056 -2 5 1477 21 36 0 0 chrX 116926707 116926735 -49723561 + AT_rich Low_complexity Low_complexity 1 28 0 5 1477 24 0 0 0 chrX 116927252 116927276 -49723020 + AT_rich Low_complexity Low_complexity 1 24 0 5 1477 321 26 0 0 chrX 116928141 116928179 -49722117 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 5 1477 5008 160 39 14 chrX 116928188 116929150 -49721146 - Lx3_Mus LINE L1 0 7009 6024 5 1477 12712 200 16 25 chrX 116929150 116931235 -49719061 - L1_Mur1 LINE L1 -575 5311 3256 5 1477 405 55 27 14 chrX 116931235 116931309 -49718987 + (TTTG)n Simple_repeat Simple_repeat 2 76 0 5 1477 12712 200 16 25 chrX 116931309 116932120 -49718176 - L1_Mur1 LINE L1 -2631 3255 2442 5 1477 563 173 19 0 chrX 116932138 116932242 -49718054 - MusHAL1 LINE L1 -1629 1724 1619 5 1477 408 198 0 139 chrX 116933223 116933254 -49717042 + MT2B LTR ERVL 142 154 -447 5 1477 739 129 95 0 chrX 116933254 116933370 -49716926 + B1_Mus1 SINE Alu 1 127 -21 5 1477 4263 144 68 11 chrX 116933496 116934454 -49715842 - MusHAL1 LINE L1 -1732 1621 600 5 1477 6410 96 11 1 chrX 116934454 116935352 -49714944 - Lx3_Mus LINE L1 -1 7008 6102 5 1477 2597 120 4 105 chrX 116935352 116935855 -49714441 + Lx3_Mus LINE L1 5655 6106 -903 5 1477 1175 293 50 38 chrX 116935857 116936629 -49713667 - L1VL2 LINE L1 -5543 792 1 5 1477 1040 343 23 51 chrX 116936653 116937218 -49713078 + Lx7 LINE L1 6815 7363 -333 5 1477 2272 211 88 7 chrX 116937583 116938184 -49712112 + RMER6C LTR ERVK 16 690 0 5 1477 1941 217 58 22 chrX 116938184 116938774 -49711522 + RMER6-int LTR ERVK 1 634 -2543 5 1477 3325 67 11 2 chrX 116939742 116940175 -49710121 + L1Md_F2 LINE L1 6145 6581 -1 5 1477 2330 66 0 0 chrX 116940203 116940508 -49709788 + L1Md_F2 LINE L1 6266 6570 -12 5 1477 558 322 15 98 chrX 116940731 116940934 -49709362 - B3A SINE B2 -4 191 6 5 1477 482 30 30 0 chrX 116941009 116941076 -49709220 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 5 1477 1103 108 0 7 chrX 116941190 116941500 -49708796 + (GAAA)n Simple_repeat Simple_repeat 1 307 0 6 1477 23 68 0 0 chrX 116942139 116942183 -49708113 + AT_rich Low_complexity Low_complexity 1 44 0 6 1477 468 0 0 0 chrX 116942716 116942768 -49707528 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1477 1788 222 14 3 chrX 116943078 116943435 -49706861 - ORR1B2 LTR MaLR 0 367 7 6 1477 396 212 0 45 chrX 116943440 116943512 -49706784 - ORR1B2-int LTR MaLR 0 1370 1302 6 1477 562 47 0 12 chrX 116943512 116943598 -49706698 + L1Md_F2 LINE L1 6498 6582 0 6 1477 396 212 0 45 chrX 116943598 116943614 -49706682 - ORR1B2-int LTR MaLR -69 1301 1286 6 1477 3657 137 33 18 chrX 116943614 116944197 -49706099 - Lx3B LINE L1 -375 6598 6018 6 1477 198 0 0 0 chrX 116944197 116944219 -49706077 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 6 1477 3657 137 33 18 chrX 116944219 116944244 -49706052 - Lx3B LINE L1 -956 6017 5982 6 1477 256 283 147 53 chrX 116944244 116944307 -49705989 - ORR1B2-int LTR MaLR -5 1958 1899 6 1477 468 181 32 0 chrX 116944307 116944401 -49705895 + Lx3B LINE L1 6872 6968 -5 6 1477 482 162 100 19 chrX 116944401 116944544 -49705752 - ORR1B2-int LTR MaLR -103 1406 1180 6 1477 542 331 4 0 chrX 116944593 116944841 -49705455 - ORR1B2-int LTR MaLR -589 920 672 6 1477 505 271 16 24 chrX 116944734 116944859 -49705437 - B1_Mur3 SINE Alu -19 130 7 6 1477 223 365 76 9 chrX 116944780 116944885 -49705411 - B4A SINE B4 -116 176 65 6 1477 10688 86 3 1 chrX 116944888 116946361 -49703935 + L1_Mm LINE L1 3800 5276 -607 6 1477 793 254 58 8 chrX 116946370 116946628 -49703668 - ORR1B2-int LTR MaLR -953 556 286 6 1477 625 71 20 20 chrX 116946628 116946728 -49703568 + (TTTC)n Simple_repeat Simple_repeat 2 101 0 6 1477 5417 79 24 1 chrX 116946770 116947600 -49702696 - L1_Mus2 LINE L1 -234 6332 5488 6 1477 1230 215 43 4 chrX 116947600 116947887 -49702409 - ORR1B2-int LTR MaLR -1478 314 2 6 1477 1493 244 20 17 chrX 116947892 116948250 -49702046 - ORR1B2 LTR MaLR -4 363 5 6 1477 549 320 60 38 chrX 116948256 116948522 -49701774 - Lx8 LINE L1 -266 7207 6936 6 1477 1958 107 166 0 chrX 116948839 116949147 -49701149 + RLTR10D LTR ERVK 1 359 0 6 1477 21766 182 30 8 chrX 116949149 116953080 -49697216 + IAP-d-int LTR ERVK 3 4022 -2520 6 1477 11110 173 14 28 chrX 116953077 116955647 -49694649 + IAP-d-int LTR ERVK 4327 7098 -582 6 1477 2404 97 59 3 chrX 116955650 116955990 -49694306 + RLTR10D LTR ERVK 1 359 0 6 1477 2463 218 40 24 chrX 116955990 116956572 -49693724 - Lx2B LINE L1 -31 6969 6379 6 1477 1563 239 38 78 chrX 116956569 116956665 -49693631 - L1_Mur2 LINE L1 -26 5851 5785 6 1477 1096 82 0 7 chrX 116956665 116956812 -49693484 - B1_Mm SINE Alu 0 147 2 6 1477 1563 239 38 78 chrX 116956812 116957192 -49693104 - L1_Mur2 LINE L1 -93 5784 5394 6 1477 1503 269 67 21 chrX 116957194 116957626 -49692670 - RMER13B LTR ERVK 0 908 457 6 1477 4346 241 107 11 chrX 116957637 116959115 -49691181 + Lx3C LINE L1 5376 7000 0 6 1477 257 226 188 6 chrX 116959106 116959266 -49691030 + L1M2 LINE L1 5178 5366 -777 6 1477 270 315 9 0 chrX 116959256 116959364 -49690932 + L1M2 LINE L1 5652 5760 -540 6 1477 183 190 47 23 chrX 116959609 116959652 -49690644 - L3 LINE CR1 -67 4422 4379 6 1477 22334 64 11 0 chrX 116959755 116963422 -49686874 - L1Md_F2 LINE L1 0 6582 2871 6 1477 32 0 0 0 chrX 116963941 116963973 -49686323 + AT_rich Low_complexity Low_complexity 1 32 0 6 1477 5309 142 14 12 chrX 116964113 116964999 -49685297 - RMER17D LTR ERVK -2 887 1 6 1477 6693 101 24 35 chrX 116964999 116965967 -49684329 - RMER17A-int LTR ERVK 0 1728 762 6 1477 258 32 0 0 chrX 116965967 116965998 -49684298 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 6 1477 6693 130 39 112 chrX 116965998 116966206 -49684090 - RMER17A-int LTR ERVK -967 761 663 6 1477 1068 171 0 89 chrX 116966390 116966627 -49683669 - RMER17A-int LTR ERVK -1510 218 3 6 1477 5219 114 57 6 chrX 116966632 116967476 -49682820 - RMER17D LTR ERVK -2 887 1 6 1477 210 241 0 0 chrX 116967890 116967944 -49682352 + A-rich Low_complexity Low_complexity 4 57 0 6 1477 2066 97 3 70 chrX 116968648 116969004 -49681292 - IAPLTR1a_Mm LTR ERVK -5 332 1 6 1477 26819 7 1 0 chrX 116969004 116971958 -49678338 - IAPEz-int LTR ERVK 0 6481 3525 6 1477 932 73 24 0 chrX 116971958 116972081 -49678215 - IAPEz-int LTR ERVK -2770 4910 4785 6 1477 1781 119 8 0 chrX 116972078 116972330 -49677966 - IAPEz-int LTR ERVK -5183 2497 2244 6 1477 933 50 0 8 chrX 116972325 116972445 -49677851 - IAPEz-int LTR ERVK -5004 1477 1359 6 1477 5018 55 0 48 chrX 116972445 116973135 -49677161 - IAPEz-int LTR ERVK -5819 662 6 6 1477 2081 94 11 70 chrX 116973135 116973491 -49676805 - IAPLTR1a_Mm LTR ERVK -2 335 1 6 1477 225 250 0 37 chrX 116974238 116974292 -49676004 + ID4_ SINE ID 2 53 -30 6 1477 210 412 29 0 chrX 116974273 116974375 -49675921 + ID_B1 SINE B4 67 171 -53 6 1477 1914 221 7 15 chrX 116974441 116974849 -49675447 + MTB_Mm LTR MaLR 1 405 -2 6 1477 1081 86 0 0 chrX 116974889 116975028 -49675268 + B1_Mus1 SINE Alu 1 139 -9 6 1477 203 171 0 0 chrX 116975039 116975080 -49675216 + (CAAA)n Simple_repeat Simple_repeat 3 43 0 6 1477 986 157 0 45 chrX 116975140 116975387 -49674909 + MurERV4_19-int LTR ERVK 5545 5780 0 6 1477 1540 283 43 108 chrX 116975387 116975945 -49674351 + RMER19A LTR ERVK 1 522 -89 6 1477 378 295 35 9 chrX 116976193 116976306 -49673990 + B3A SINE B2 1 116 -82 6 1477 763 65 8 8 chrX 116976357 116976481 -49673815 + (TA)n Simple_repeat Simple_repeat 2 125 0 6 1477 21 104 0 0 chrX 116976904 116976981 -49673315 + AT_rich Low_complexity Low_complexity 1 77 0 6 1477 189 0 0 0 chrX 116977067 116977088 -49673208 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 6 1477 997 196 8 61 chrX 116977312 116977573 -49672723 + L1_Mur1 LINE L1 4871 5117 -769 6 1477 11494 93 3 3 chrX 116977559 116979206 -49671090 - L1_Mm LINE L1 -2273 3610 1964 6 1477 1568 176 13 6 chrX 116979203 116979518 -49670778 + L1_Mm LINE L1 5154 5470 -413 6 1477 570 213 7 7 chrX 116979519 116979661 -49670635 + Lx LINE L1 6509 6650 -4 6 1477 381 43 0 0 chrX 116980195 116980242 -49670054 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 6 1477 1037 100 0 0 chrX 116980244 116980384 -49669912 - B1_Mus1 SINE Alu -6 142 3 6 1477 528 45 0 0 chrX 116980538 116980605 -49669691 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 6 1477 183 80 0 0 chrX 116980609 116980634 -49669662 + (GA)n Simple_repeat Simple_repeat 2 26 0 6 1477 987 149 0 0 chrX 116980820 116980988 -49669308 + (TCC)n Simple_repeat Simple_repeat 1 168 0 6 1477 258 239 15 0 chrX 116981184 116981251 -49669045 + (TA)n Simple_repeat Simple_repeat 1 68 0 6 1477 21 0 0 0 chrX 116982016 116982037 -49668259 + AT_rich Low_complexity Low_complexity 1 21 0 6 1477 26 30 0 0 chrX 116982313 116982346 -49667950 + AT_rich Low_complexity Low_complexity 1 33 0 6 1477 820 173 270 4 chrX 116983111 116983378 -49666918 - L1_Rod LINE L1 -430 5417 5080 6 1477 347 329 150 25 chrX 116983380 116983864 -49666432 - L1M2 LINE L1 -3289 2854 2311 6 1477 37 52 0 0 chrX 116983898 116983956 -49666340 + AT_rich Low_complexity Low_complexity 1 58 0 6 1477 207 0 0 0 chrX 116984107 116984130 -49666166 + (TTA)n Simple_repeat Simple_repeat 1 23 0 6 1477 183 204 0 0 chrX 116985880 116985924 -49664372 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 1477 596 77 11 0 chrX 116986043 116986134 -49664162 + (TAGA)n Simple_repeat Simple_repeat 4 95 0 6 1477 24 53 0 0 chrX 116986575 116986613 -49663683 + AT_rich Low_complexity Low_complexity 1 38 0 6 1477 468 309 101 0 chrX 116986722 116986910 -49663386 - B3 SINE B2 -9 207 1 6 1477 3722 231 73 2 chrX 116987028 116987814 -49662482 - Lx2B LINE L1 -2 6998 6152 6 1477 342 0 0 0 chrX 116987814 116987852 -49662444 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1477 315 0 0 0 chrX 116987852 116987886 -49662410 + (GA)n Simple_repeat Simple_repeat 2 36 0 6 1477 3722 231 73 2 chrX 116987886 116988009 -49662287 - Lx2B LINE L1 -849 6151 6025 6 1477 1698 151 65 12 chrX 116988011 116988401 -49661895 + Lx2B LINE L1 5519 5923 -1077 6 1477 479 238 122 7 chrX 116988402 116988550 -49661746 + Lx6 LINE L1 6694 6858 -602 6 1477 233 274 79 16 chrX 116988552 116988615 -49661681 + MamRep605 Unknown Unknown 309 375 -501 6 1477 791 275 146 13 chrX 116988620 116989051 -49661245 + Lx6 LINE L1 6953 7441 -19 6 1477 438 20 0 0 chrX 116989127 116989178 -49661118 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 6 1477 282 175 0 0 chrX 116989178 116989235 -49661061 - Lx3A LINE L1 -8 6973 6917 6 1477 388 238 117 19 chrX 116989236 116989339 -49660957 + Lx6 LINE L1 7024 7136 -324 6 1477 870 39 0 0 chrX 116989370 116989473 -49660823 + L1_Mus2 LINE L1 6216 6318 -248 6 1477 3007 76 2 2 chrX 116989852 116990250 -49660046 + L1_Mus2 LINE L1 6169 6566 0 6 1477 3052 322 43 38 chrX 116990373 116992207 -49658089 - Lx8 LINE L1 -151 7322 5440 6 1477 229 143 0 20 chrX 116992251 116992301 -49657995 + L1M2 LINE L1 3670 3718 -2425 6 1477 21 36 0 0 chrX 116992494 116992522 -49657774 + AT_rich Low_complexity Low_complexity 1 28 0 6 1477 730 269 29 19 chrX 116992877 116993082 -49657214 + Lx7 LINE L1 6709 6915 -781 6 1477 2504 147 28 48 chrX 116993087 116993582 -49656714 + Lx2 LINE L1 5859 6343 -654 6 1477 1182 97 11 11 chrX 116993582 116993769 -49656527 - L1_Mus3 LINE L1 -5 6633 6447 6 1477 3884 150 8 19 chrX 116993783 116993912 -49656384 + Lx2 LINE L1 6334 6462 -535 6 1477 3334 40 2 0 chrX 116993912 116994307 -49655989 - MTA_Mm LTR MaLR 0 396 1 6 1477 3884 150 8 19 chrX 116994307 116994843 -49655453 + Lx2 LINE L1 6463 6991 -6 6 1477 726 44 0 0 chrX 116994844 116994934 -49655362 + (GAAA)n Simple_repeat Simple_repeat 4 93 0 6 1477 2338 165 20 24 chrX 116995446 116995899 -49654397 - Lx LINE L1 -9 6645 6195 6 1477 189 74 0 0 chrX 116996108 116996135 -49654161 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 1477 486 49 0 0 chrX 116996135 116996196 -49654100 + (TA)n Simple_repeat Simple_repeat 2 62 0 6 1477 6227 30 1 0 chrX 116996279 116997014 -49653282 + L1Md_F2 LINE L1 5845 6580 -2 6 1477 501 17 0 0 chrX 116997194 116997252 -49653044 + (TC)n Simple_repeat Simple_repeat 2 59 0 6 1477 648 257 35 50 chrX 116997628 116997829 -49652467 + B3A SINE B2 1 198 0 6 1477 342 0 0 0 chrX 116997849 116997887 -49652409 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1477 215 157 0 19 chrX 116997887 116997939 -49652357 + GA-rich Low_complexity Low_complexity 2 52 0 6 1477 340 324 47 31 chrX 116998120 116998378 -49651918 + L1MCa LINE L1 1506 1767 -4741 6 1477 689 194 7 7 chrX 116999168 116999308 -49650988 - URR1A DNA MER1_type 0 226 87 6 1477 385 72 0 42 chrX 116999487 116999559 -49650737 + (CAAAAA)n Simple_repeat Simple_repeat 3 71 0 6 1477 475 233 0 0 chrX 116999641 116999744 -49650552 - L1_Mur2 LINE L1 -2195 3682 3580 6 1477 1269 204 55 4 chrX 116999744 117000000 -49650296 + RLTR21 LTR ERVK 1 269 -1303 6 1477 476 202 0 0 chrX 117000000 117000084 -49650212 + RLTR21 LTR ERVK 270 353 -1219 1 1477 1478 173 23 76 chrX 117000084 117000549 -49649747 - RMER17C LTR ERVK -519 439 16 2 1477 1449 179 135 15 chrX 117000597 117000937 -49649359 + RMER17C-int LTR ERVK 2806 3186 -52 3 1477 1145 138 264 0 chrX 117000957 117001226 -49649070 + RLTR22_Mur LTR ERVK 449 788 -1060 4 1477 888 197 106 18 chrX 117001287 117001504 -49648792 + RLTR22_Mur LTR ERVK 1592 1827 -21 4 1477 3145 239 22 48 chrX 117001792 117002000 -49648296 - L1_Mur3 LINE L1 -2294 3586 3394 5 1477 1820 154 58 107 chrX 117002000 117002413 -49647883 - RLTR9C LTR ERVK 0 393 1 6 1477 3145 239 22 48 chrX 117002413 117003269 -49647027 - L1_Mur3 LINE L1 -2487 3393 2549 5 1477 2511 244 109 38 chrX 117003265 117004154 -49646142 + Lx5 LINE L1 4417 5368 -509 7 1477 4251 148 44 32 chrX 117004147 117004371 -49645925 - Lx2 LINE L1 -426 6571 6343 8 1477 1076 97 0 0 chrX 117004371 117004515 -49645781 + B1_Mus2 SINE Alu 1 144 -3 9 1477 459 0 0 0 chrX 117004515 117004566 -49645730 + (TAA)n Simple_repeat Simple_repeat 2 52 0 1 1477 4251 148 44 32 chrX 117004566 117005114 -49645182 - Lx2 LINE L1 -655 6342 5790 8 1477 2347 153 12 17 chrX 117005114 117005532 -49644764 + Lx2 LINE L1 6581 6996 -1 1 1477 2080 286 72 16 chrX 117005533 117007275 -49643021 + Lx5 LINE L1 5355 7433 -27 7 1477 1375 315 44 49 chrX 117007354 117008134 -49642162 + Lx9 LINE L1 6369 7144 -500 1 1477 214 328 0 43 chrX 117008637 117008707 -49641589 + PB1D10 SINE Alu 43 109 -8 1 1477 572 281 121 28 chrX 117009038 117009393 -49640903 + L1MC LINE L1 3129 3516 -2630 1 1477 23 68 0 0 chrX 117009393 117009437 -49640859 + AT_rich Low_complexity Low_complexity 1 44 0 1 1477 1899 273 99 16 chrX 117009565 117010243 -49640053 - Lx7 LINE L1 -233 7463 6730 1 1477 1430 236 20 80 chrX 117010240 117010700 -49639596 - L1_Mur3 LINE L1 -13 5867 5436 1 1477 1069 220 0 16 chrX 117010716 117010970 -49639326 - L1_Mur3 LINE L1 -858 5022 4773 1 1477 518 235 90 57 chrX 117010993 117011237 -49639059 - LTRIS5 LTR ERV1 0 564 223 1 1477 1546 195 38 146 chrX 117011383 117011911 -49638385 - L1_Mur3 LINE L1 -1114 4766 4296 1 1477 5698 101 7 4 chrX 117011931 117012747 -49637549 - L1_Mus4 LINE L1 -7 6629 5811 1 1477 1327 64 0 0 chrX 117012751 117012924 -49637372 + L1_Mus4 LINE L1 5656 5828 -808 1 1477 3415 236 45 28 chrX 117012954 117014026 -49636270 - L1_Mur3 LINE L1 -1595 4285 3196 1 1477 1586 253 131 44 chrX 117014026 117014593 -49635703 + RLTR18 LTR ERVK 1 616 0 2 1477 366 327 33 28 chrX 117014621 117014832 -49635464 + RLTR18-int LTR ERVK 2 213 -5148 2 1477 417 20 0 0 chrX 117014878 117014928 -49635368 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 1477 2464 114 26 3 chrX 117015332 117015709 -49634587 + Lx2 LINE L1 6611 6996 -1 2 1477 950 231 60 33 chrX 117015721 117015935 -49634361 + RLTR18-int LTR ERVK 3240 3464 -1897 2 1477 225 0 0 0 chrX 117015935 117015960 -49634336 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1477 950 231 60 33 chrX 117015960 117016076 -49634220 + RLTR18-int LTR ERVK 3465 3579 -1782 2 1477 515 112 11 0 chrX 117016805 117016894 -49633402 + (TA)n Simple_repeat Simple_repeat 1 90 0 2 1477 330 188 134 10 chrX 117016903 117017000 -49633296 + RLTR42-int LTR ERVK 1944 2052 -3470 2 1477 8663 160 73 29 chrX 117017014 117018226 -49632070 + L1VL4 LINE L1 64 1338 -2221 2 1477 4111 43 0 0 chrX 117018226 117018714 -49631582 + L1Md_T LINE L1 6095 6582 0 2 1477 8663 119 7 17 chrX 117018714 117019654 -49630642 + L1VL4 LINE L1 1339 2271 -1288 2 1477 28460 121 3 33 chrX 117019649 117021158 -49629138 + L1Md_F2 LINE L1 478 1966 -3917 2 1477 243 0 0 0 chrX 117021158 117021185 -49629111 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2 1477 28460 100 3 40 chrX 117021185 117021284 -49629012 + L1Md_F2 LINE L1 1967 2071 -3812 2 1477 2255 125 0 40 chrX 117021284 117021658 -49628638 + L1Md_F2 LINE L1 6218 6576 -6 3 1477 28460 100 3 40 chrX 117021658 117025342 -49624954 + L1Md_F2 LINE L1 2072 5585 -298 2 1477 6969 98 9 6 chrX 117025342 117026333 -49623963 + L1Md_F2 LINE L1 5587 6580 -2 2 1477 16601 172 16 9 chrX 117026386 117026764 -49623532 + L1_Mm LINE L1 2614 2993 -2890 3 1477 425 19 0 18 chrX 117026764 117026819 -49623477 + (CAAAC)n Simple_repeat Simple_repeat 1 54 0 3 1477 216 0 0 0 chrX 117026821 117026845 -49623451 + (CAAAA)n Simple_repeat Simple_repeat 5 28 0 3 1477 16601 172 16 9 chrX 117026845 117028568 -49621728 + L1_Mm LINE L1 2994 4727 -1156 3 1477 261 0 0 0 chrX 117028568 117028597 -49621699 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 3 1477 16601 172 16 9 chrX 117028597 117029645 -49620651 + L1_Mm LINE L1 4728 5784 -99 3 1477 258 196 0 0 chrX 117029645 117029691 -49620605 + RLTR18-int LTR ERVK 4819 4864 -497 2 1477 466 310 0 13 chrX 117029785 117029942 -49620354 + RLTR18-int LTR ERVK 5207 5361 0 2 1477 1688 256 101 38 chrX 117029946 117030522 -49619774 + RLTR18 LTR ERVK 5 616 0 2 1477 2390 229 44 100 chrX 117030523 117030586 -49619710 - L1_Mur3 LINE L1 -2680 3200 3135 3 1477 201 39 0 0 chrX 117030586 117030612 -49619684 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 3 1477 2390 229 44 100 chrX 117030612 117030868 -49619428 - L1_Mur3 LINE L1 -2746 3134 2927 3 1477 230 0 0 32 chrX 117030868 117030899 -49619397 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1477 1098 95 0 7 chrX 117030906 117031055 -49619241 - B1_Mus1 SINE Alu 0 148 1 3 1477 2390 229 44 100 chrX 117031055 117031141 -49619155 - L1_Mur3 LINE L1 -2961 2919 2846 3 1477 1100 153 19 14 chrX 117031141 117031353 -49618943 - Lx LINE L1 -6 6648 6436 3 1477 2390 229 44 100 chrX 117031353 117032083 -49618213 - L1_Mur3 LINE L1 -3035 2845 2121 3 1477 4422 86 21 80 chrX 117032084 117032858 -49617438 + RMER17A LTR ERVK 2 729 -22 4 1477 954 241 166 12 chrX 117032906 117033356 -49616940 - L1_Mur3 LINE L1 -3820 2060 1552 3 1477 21 0 0 0 chrX 117033725 117033746 -49616550 + AT_rich Low_complexity Low_complexity 1 21 0 4 1477 1797 228 143 24 chrX 117033901 117034440 -49615856 + RMER6C LTR ERVK 1 603 -87 4 1477 2035 215 48 32 chrX 117034440 117035234 -49615062 - L1Md_F LINE L1 -5434 1085 298 4 1477 252 86 0 0 chrX 117035326 117035361 -49614935 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 4 1477 1184 137 0 14 chrX 117035385 117035592 -49614704 - Lx LINE L1 -5 6649 6446 4 1477 7184 48 53 9 chrX 117035588 117036534 -49613762 + L1Md_F2 LINE L1 5593 6579 -3 4 1477 807 289 74 14 chrX 117036584 117037002 -49613294 - L1M3 LINE L1 -379 5789 5347 4 1477 607 275 66 36 chrX 117037247 117037683 -49612613 - L1M3 LINE L1 -1293 4853 4397 4 1477 258 32 0 0 chrX 117038994 117039025 -49611271 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1477 230 0 33 0 chrX 117039405 117039435 -49610861 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 4 1477 650 13 13 0 chrX 117039742 117039821 -49610475 + (TAGA)n Simple_repeat Simple_repeat 1 80 0 5 1477 22 0 0 0 chrX 117040432 117040454 -49609842 + AT_rich Low_complexity Low_complexity 1 22 0 5 1477 775 146 14 0 chrX 117040454 117040598 -49609698 + CT-rich Low_complexity Low_complexity 1 146 0 5 1477 218 200 27 41 chrX 117042813 117042886 -49607410 + T-rich Low_complexity Low_complexity 2 73 0 5 1477 29 47 0 0 chrX 117044453 117044496 -49605800 + AT_rich Low_complexity Low_complexity 1 43 0 5 1477 440 35 17 0 chrX 117045255 117045313 -49604983 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1477 935 239 33 24 chrX 117046611 117046821 -49603475 - B3 SINE B2 0 216 5 5 1477 240 59 39 19 chrX 117046837 117046889 -49603407 + (TTTTTG)n Simple_repeat Simple_repeat 1 53 0 5 1477 668 210 34 34 chrX 117046889 117047037 -49603259 - B1_Mur1 SINE Alu 0 149 2 5 1478 26 64 0 0 chrX 117047510 117047557 -49602739 + AT_rich Low_complexity Low_complexity 1 47 0 5 1478 378 0 0 0 chrX 117048355 117048397 -49601899 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1478 2617 152 39 40 chrX 117049792 117050447 -49599849 - Lx4A LINE L1 -953 6105 5410 6 1478 4713 173 44 7 chrX 117050431 117051275 -49599021 + Lx4A LINE L1 6108 6982 -76 6 1478 223 309 0 29 chrX 117051291 117051431 -49598865 + (TAAA)n Simple_repeat Simple_repeat 2 137 0 6 1478 21 0 0 0 chrX 117051620 117051641 -49598655 + AT_rich Low_complexity Low_complexity 1 21 0 6 1478 454 281 21 28 chrX 117052865 117053008 -49597288 + B1_Mus2 SINE Alu 6 147 0 6 1478 576 122 89 0 chrX 117053213 117053336 -49596960 - Lx3B LINE L1 0 6973 6840 6 1478 795 99 60 3 chrX 117053516 117053652 -49596644 + L1_Mur1 LINE L1 4438 4612 -1274 6 1478 1667 133 199 13 chrX 117053631 117054003 -49596293 + Lx3_Mus LINE L1 6547 6987 -22 6 1478 332 22 0 22 chrX 117054003 117054049 -49596247 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 6 1478 405 0 0 0 chrX 117054059 117054104 -49596192 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 1478 319 333 86 55 chrX 117054139 117054396 -49595900 + LTR16E1 LTR ERVL 242 506 -32 7 1478 246 62 0 0 chrX 117054899 117054931 -49595365 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 1478 677 339 0 0 chrX 117055360 117055549 -49594747 + B3 SINE B2 24 212 -4 7 1478 266 327 85 45 chrX 117056005 117056229 -49594067 + L1MCa LINE L1 589 821 -5687 7 1478 616 319 58 2 chrX 117056254 117056462 -49593834 + Lx3C LINE L1 6731 7025 -33 7 1478 34619 87 3 11 chrX 117056533 117063065 -49587231 - L1Md_F2 LINE L1 -14 6568 101 7 1478 595 290 72 23 chrX 117063077 117063426 -49586870 + L1MC1 LINE L1 4901 5266 -880 7 1478 510 17 0 0 chrX 117063436 117063495 -49586801 + (GA)n Simple_repeat Simple_repeat 2 60 0 7 1478 1002 106 0 0 chrX 117063496 117063637 -49586659 + B1_Mus1 SINE Alu 7 147 -1 7 1478 240 97 16 31 chrX 117063638 117063702 -49586594 + (CAAAA)n Simple_repeat Simple_repeat 3 65 0 7 1478 457 220 89 86 chrX 117063736 117064039 -49586257 + L1MD LINE L1 5270 5573 -2422 8 1478 248 261 122 0 chrX 117064158 117064273 -49586023 + Lx7 LINE L1 7564 7692 -4 8 1478 643 256 69 11 chrX 117064296 117064573 -49585723 + L1MC1 LINE L1 5579 5871 -462 7 1478 291 355 22 0 chrX 117064831 117064905 -49585391 + L1MC1 LINE L1 6141 6214 -119 7 1478 1846 150 9 63 chrX 117064905 117065253 -49585043 - ORR1A4 LTR MaLR 0 329 1 8 1478 291 355 22 0 chrX 117065253 117065361 -49584935 + L1MC1 LINE L1 6215 6326 -7 7 1478 224 371 43 19 chrX 117065476 117065638 -49584658 + MIR SINE MIR 21 186 -76 8 1478 584 71 0 10 chrX 117065667 117065766 -49584530 + L1Md_F2 LINE L1 6485 6582 0 8 1478 188 135 0 26 chrX 117066323 117066361 -49583935 + GA-rich Low_complexity Low_complexity 1 37 0 8 1478 25 31 0 0 chrX 117067120 117067152 -49583144 + AT_rich Low_complexity Low_complexity 1 32 0 8 1478 567 188 0 0 chrX 117068374 117068486 -49581810 + A-rich Low_complexity Low_complexity 1 112 0 8 1478 233 196 0 0 chrX 117068894 117068940 -49581356 + MTEa LTR MaLR 1 46 -333 8 1478 911 213 100 25 chrX 117069042 117069283 -49581013 + Lx6 LINE L1 6740 6998 -462 8 1478 7490 69 2 0 chrX 117069282 117070262 -49580034 + L1Md_F2 LINE L1 4605 5586 -297 9 1478 7765 58 9 3 chrX 117070262 117071252 -49579044 + L1Md_F2 LINE L1 5587 6582 0 9 1478 1379 247 157 3 chrX 117071252 117071577 -49578719 + Lx6 LINE L1 6989 7363 -97 8 1478 6277 180 53 31 chrX 117071570 117073191 -49577105 - L1_Mur2 LINE L1 -274 5603 3733 9 1478 723 172 44 118 chrX 117073213 117073417 -49576879 - Lx3A LINE L1 -1 7008 6820 9 1478 4025 85 7 5 chrX 117073409 117073976 -49576320 - L1_Mm LINE L1 -716 5167 4600 9 1478 3874 119 31 14 chrX 117073959 117074832 -49575464 - Lx3A LINE L1 -795 6186 5296 9 1478 320 270 90 54 chrX 117074832 117075054 -49575242 - RLTR13D3 LTR ERVK 0 1114 987 9 1478 418 254 228 35 chrX 117075267 117075495 -49574801 - RLTR9A LTR ERVK -95 273 2 9 1478 571 256 11 19 chrX 117075535 117075685 -49574611 + ID_B1 SINE B4 42 181 -43 9 1478 794 187 36 0 chrX 117075690 117075829 -49574467 + B1_Mur1 SINE Alu 6 149 0 9 1478 929 9 0 9 chrX 117076152 117076263 -49574033 + (GGGA)n Simple_repeat Simple_repeat 3 112 0 9 1478 26 0 0 0 chrX 117076336 117076362 -49573934 + AT_rich Low_complexity Low_complexity 1 26 0 9 1478 250 143 48 0 chrX 117076393 117076435 -49573861 - ID_B1 SINE B4 -5 219 176 1 1478 250 186 0 0 chrX 117076431 117076474 -49573822 - B2_Mm2 SINE B2 -152 43 1 1 1478 230 184 0 0 chrX 117076920 117076958 -49573338 - RLTR13D3 LTR ERVK -1076 38 1 1 1478 6815 176 58 7 chrX 117076958 117078331 -49571965 - L1_Mur2 LINE L1 -585 5292 3849 1 1478 1416 141 61 4 chrX 117078330 117078593 -49571703 + L1_Mur1 LINE L1 2982 3259 -2627 1 1478 3118 66 0 8 chrX 117079271 117079670 -49570626 - MTA_Mm LTR MaLR 0 396 1 1 1478 24 67 0 0 chrX 117079674 117079719 -49570577 + AT_rich Low_complexity Low_complexity 1 45 0 1 1478 261 0 0 0 chrX 117081927 117081956 -49568340 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1478 378 0 0 0 chrX 117081956 117081997 -49568299 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 1478 1555 135 30 66 chrX 117082072 117082406 -49567890 + RLTRETN_Mm LTR ERVK 1 322 0 1 1478 19697 160 26 26 chrX 117082407 117089278 -49561018 + ETnERV2-int LTR ERVK 2 7299 -107 1 1478 1530 141 30 66 chrX 117089278 117089612 -49560684 + RLTRETN_Mm LTR ERVK 1 322 0 1 1478 487 352 42 13 chrX 117090141 117090377 -49559919 + Lx7 LINE L1 7069 7311 -385 1 1478 213 39 0 0 chrX 117090378 117090404 -49559892 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1478 608 134 11 28 chrX 117090406 117090583 -49559713 + (CAGAGA)n Simple_repeat Simple_repeat 2 175 0 1 1478 315 186 57 0 chrX 117090583 117090653 -49559643 + HAL1-3A_ME LINE L1 1976 2049 -809 1 1478 25 31 0 0 chrX 117090866 117090898 -49559398 + AT_rich Low_complexity Low_complexity 1 32 0 1 1478 186 167 0 0 chrX 117091514 117091550 -49558746 + A-rich Low_complexity Low_complexity 2 37 0 1 1478 249 365 69 36 chrX 117091988 117092264 -49558032 + L2 LINE L2 2312 2596 -823 1 1478 324 0 0 0 chrX 117092299 117092335 -49557961 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1478 411 21 0 0 chrX 117092347 117092395 -49557901 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1478 24 53 0 0 chrX 117092959 117092997 -49557299 + AT_rich Low_complexity Low_complexity 1 38 0 1 1478 279 225 0 0 chrX 117093161 117093232 -49557064 + (TA)n Simple_repeat Simple_repeat 1 71 0 1 1478 189 0 0 0 chrX 117093363 117093384 -49556912 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1 1478 580 368 60 41 chrX 117093770 117094184 -49556112 + LTR40a LTR ERVL 78 499 -20 1 1478 29 0 0 0 chrX 117095388 117095417 -49554879 + AT_rich Low_complexity Low_complexity 1 29 0 1 1478 2327 120 3 0 chrX 117095469 117095819 -49554477 - L1_Mus4 LINE L1 -3 6633 6283 1 1478 5244 106 11 0 chrX 117095818 117096583 -49553713 + L1_Mus3 LINE L1 5858 6630 -8 1 1478 34 106 0 0 chrX 117096900 117097032 -49553264 + AT_rich Low_complexity Low_complexity 1 132 0 1 1478 30 0 0 0 chrX 117097359 117097389 -49552907 + AT_rich Low_complexity Low_complexity 1 30 0 1 1478 952 244 26 9 chrX 117097410 117097637 -49552659 + MT2A LTR ERVL 2 232 -301 1 1478 3172 261 63 51 chrX 117097956 117099683 -49550613 + Lx5 LINE L1 5260 7016 -34 1 1478 1933 160 7 77 chrX 117099683 117100123 -49550173 - RLTR9E LTR ERVK 0 409 1 1 1478 3172 282 84 72 chrX 117100123 117100161 -49550135 + Lx5 LINE L1 7017 7050 0 1 1478 27 29 0 0 chrX 117100225 117100259 -49550037 + AT_rich Low_complexity Low_complexity 1 34 0 1 1478 1453 241 42 15 chrX 117100488 117100851 -49549445 - ORR1C1 LTR MaLR -7 363 3 1 1478 442 297 43 7 chrX 117100969 117101108 -49549188 - B1F SINE Alu 0 149 6 1 1478 267 259 19 0 chrX 117101061 117101115 -49549181 - B4A SINE B4 -155 137 83 1 1478 906 159 69 125 chrX 117101504 117101720 -49548576 + RLTR23 LTR ERV1 1 204 -226 1 1478 745 180 11 90 chrX 117101808 117101985 -49548311 + RLTR23 LTR ERV1 221 383 -47 1 1478 495 0 0 0 chrX 117102447 117102502 -49547794 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 1478 1014 323 49 21 chrX 117102531 117103044 -49547252 + Lx7 LINE L1 5978 6504 -1192 1 1478 753 197 0 42 chrX 117103069 117103212 -49547084 - B1_Mus2 SINE Alu -2 145 9 1 1478 1663 331 60 18 chrX 117103222 117104009 -49546287 + Lx7 LINE L1 6492 7311 -385 1 1478 232 147 27 68 chrX 117104024 117104097 -49546199 + T-rich Low_complexity Low_complexity 4 73 0 1 1478 3818 187 20 14 chrX 117104314 117105025 -49545271 + RMER19A LTR ERVK 23 737 0 1 1478 9668 117 2 0 chrX 117105072 117106555 -49543741 - L1_Mm LINE L1 -2684 3199 1714 1 1478 6038 117 11 1 chrX 117106545 117107453 -49542843 + L1_Mm LINE L1 4937 5853 -30 1 1478 1367 230 139 66 chrX 117107466 117107875 -49542421 + MT2A LTR ERVL 21 459 -74 1 1478 354 45 0 0 chrX 117107875 117107919 -49542377 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 1 1478 238 213 50 60 chrX 117108046 117108146 -49542150 + L1MCa LINE L1 887 1063 -5688 1 1478 413 278 30 35 chrX 117108150 117108358 -49541938 + L1MCa LINE L1 942 1235 -5516 1 1478 265 247 85 130 chrX 117108453 117108723 -49541573 + L1MCa LINE L1 1241 1498 -5253 1 1478 2199 228 55 31 chrX 117108768 117109442 -49540854 + RMER6C LTR ERVK 1 690 0 1 1478 5225 107 13 5 chrX 117109602 117110355 -49539941 + L1_Mus3 LINE L1 5874 6632 -6 1 1478 618 14 0 0 chrX 117110383 117110454 -49539842 + (GGAA)n Simple_repeat Simple_repeat 3 73 0 1 1478 5619 155 10 5 chrX 117110508 117111449 -49538847 - Lx2 LINE L1 -390 6607 5663 1 1478 2399 108 25 13 chrX 117111449 117111842 -49538454 + Lx2 LINE L1 6592 6989 -8 1 1478 216 0 0 0 chrX 117111842 117111866 -49538430 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 1478 271 346 0 13 chrX 117112262 117112341 -49537955 - ID4_ SINE ID -1 82 5 1 1478 233 237 26 13 chrX 117113007 117113084 -49537212 + L1MB7 LINE L1 6104 6181 -3 1 1478 255 336 107 45 chrX 117113878 117114121 -49536175 + Lx8 LINE L1 6868 7125 -348 1 1478 1201 295 50 16 chrX 117114129 117114508 -49535788 - MTD LTR MaLR -27 392 1 1 1478 588 294 91 25 chrX 117114530 117114806 -49535490 + Lx8 LINE L1 7173 7466 -7 1 1478 440 318 91 27 chrX 117115181 117115401 -49534895 - B4A SINE B4 -18 274 41 1 1478 7315 103 12 4 chrX 117116562 117117636 -49532660 - Lx3_Mus LINE L1 -67 5819 4737 1 1478 1922 141 37 3 chrX 117117635 117117956 -49532340 + Lx3_Mus LINE L1 5774 6105 -904 1 1478 1158 68 0 0 chrX 117118129 117118276 -49532020 + B1_Mm SINE Alu 1 147 0 1 1478 708 53 21 0 chrX 117120713 117120808 -49529488 + B1_Mm SINE Alu 46 142 -5 1 1478 390 42 0 0 chrX 117120808 117120856 -49529440 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 1 1478 2016 98 0 17 chrX 117120930 117121221 -49529075 - L1Md_F2 LINE L1 0 6582 6297 1 1478 1069 296 91 36 chrX 117121257 117121636 -49528660 + Lx8 LINE L1 5056 5453 -394 1 1478 1003 57 41 41 chrX 117121636 117121782 -49528514 + B1_Mm SINE Alu 1 146 -1 1 1478 366 42 0 0 chrX 117121787 117121835 -49528461 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 1 1478 1069 302 80 39 chrX 117121835 117122219 -49528077 + Lx8 LINE L1 5454 5892 -1581 1 1478 194 0 39 0 chrX 117122453 117122479 -49527817 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 1478 19435 103 27 6 chrX 117122994 117124800 -49525496 - L1_Mus1 LINE L1 0 6567 4732 1 1478 198 0 0 0 chrX 117124800 117124822 -49525474 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1 1478 3391 50 0 2 chrX 117124824 117125242 -49525054 - L1Md_F3 LINE L1 -10 6574 6158 1 1478 19435 111 49 11 chrX 117125242 117127167 -49523129 - L1_Mus1 LINE L1 -1152 4731 2709 1 1478 12521 89 4 11 chrX 117127174 117128983 -49521313 + L1_Mm LINE L1 2548 4344 -1539 1 1478 8146 94 4 4 chrX 117128973 117130504 -49519792 - L1_Mus1 LINE L1 -4113 1770 240 1 1478 1472 108 4 101 chrX 117130567 117130834 -49519462 + L1_Mus2 LINE L1 6326 6566 0 1 1478 1038 80 17 1 chrX 117131257 117131406 -49518890 - B1_Mm SINE Alu 0 311 14 1 1478 405 0 0 0 chrX 117131746 117131791 -49518505 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1478 214 319 68 27 chrX 117131859 117131933 -49518363 - B1F1 SINE Alu -60 89 13 1 1478 226 324 57 29 chrX 117132501 117132606 -49517690 - BC1_Mm scRNA scRNA -40 112 5 1 1478 456 19 0 0 chrX 117132625 117132678 -49517618 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1478 1842 214 39 22 chrX 117132841 117133058 -49517238 - L1_Mur1 LINE L1 -140 5746 5531 1 1478 207 0 0 0 chrX 117133066 117133089 -49517207 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1 1478 1135 75 0 0 chrX 117133089 117133226 -49517070 - B1_Mus2 SINE Alu -9 138 2 1 1478 1842 214 39 22 chrX 117133226 117133418 -49516878 - L1_Mur1 LINE L1 -356 5530 5330 1 1478 2645 261 119 50 chrX 117133418 117133807 -49516489 + Lx4B LINE L1 5931 6333 -725 1 1478 792 125 94 0 chrX 117133807 117133935 -49516361 - B1_Mus1 SINE Alu -7 141 2 1 1478 2645 261 119 50 chrX 117133935 117134541 -49515755 + Lx4B LINE L1 6334 6995 -63 1 1478 24 0 0 0 chrX 117134558 117134582 -49515714 + AT_rich Low_complexity Low_complexity 1 24 0 1 1478 4366 167 27 29 chrX 117134594 117135116 -49515180 + L1_Mur2 LINE L1 4290 4796 -1081 1 1478 387 0 0 0 chrX 117135116 117135159 -49515137 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1478 4366 167 27 29 chrX 117135159 117135555 -49514741 + L1_Mur2 LINE L1 4797 5205 -672 1 1478 2291 225 55 13 chrX 117135566 117136305 -49513991 - Lx5 LINE L1 -431 6619 5812 1 1478 596 106 11 0 chrX 117136401 117136495 -49513801 + (TC)n Simple_repeat Simple_repeat 1 95 0 1 1478 5270 108 10 9 chrX 117136565 117137556 -49512740 + L1_Mur1 LINE L1 1056 2049 -3837 1 1478 3551 98 26 6 chrX 117137554 117138089 -49512207 + L1_Mur1 LINE L1 5014 5559 -327 1 1478 6052 137 28 0 chrX 117138089 117139069 -49511227 + Lx3_Mus LINE L1 5998 7004 -5 1 1478 22 0 0 0 chrX 117139411 117139433 -49510863 + AT_rich Low_complexity Low_complexity 1 22 0 1 1478 21 0 0 0 chrX 117139781 117139802 -49510494 + AT_rich Low_complexity Low_complexity 1 21 0 1 1478 22 35 0 0 chrX 117139948 117139977 -49510319 + AT_rich Low_complexity Low_complexity 1 29 0 1 1478 28 0 0 0 chrX 117140971 117140999 -49509297 + AT_rich Low_complexity Low_complexity 1 28 0 1 1478 441 0 0 0 chrX 117141070 117141119 -49509177 + (TTTTA)n Simple_repeat Simple_repeat 4 52 0 1 1478 3119 147 34 11 chrX 117141130 117141660 -49508636 - Lx3A LINE L1 -10 6971 6430 1 1478 376 299 159 14 chrX 117141736 117141943 -49508353 + MLT1J-int LTR MaLR 98 334 -1053 1 1478 2400 234 52 3 chrX 117142293 117142910 -49507386 + Lx9 LINE L1 6998 7644 0 1 1478 1724 257 77 26 chrX 117143123 117143706 -49506590 - Lx6 LINE L1 -1260 6200 5588 1 1478 1061 234 13 0 chrX 117143716 117143942 -49506354 + Lx6 LINE L1 6218 6446 -1014 1 1478 280 150 31 62 chrX 117143954 117144018 -49506278 - Lx6 LINE L1 -1085 6375 6314 1 1478 307 202 37 138 chrX 117144060 117144169 -49506127 + ORR1B2 LTR MaLR 1 98 -269 1 1478 1597 209 53 3 chrX 117144196 117144556 -49505740 + ORR1C1 LTR MaLR 1 378 0 1 1478 349 261 121 39 chrX 117144559 117144766 -49505530 - Lx7 LINE L1 -1514 6182 5959 2 1478 470 242 40 0 chrX 117144766 117144890 -49505406 + L1_Mur3 LINE L1 5355 5483 -397 2 1478 399 290 65 36 chrX 117144898 117145072 -49505224 + RMER17C LTR ERVK 1 180 -230 2 1478 1071 0 0 0 chrX 117145072 117145191 -49505105 + (TCTCC)n Simple_repeat Simple_repeat 1 119 0 2 1478 399 290 65 36 chrX 117145191 117145263 -49505033 + RMER17C LTR ERVK 181 253 -157 2 1478 3469 230 27 59 chrX 117146399 117147277 -49503019 - Lx4B LINE L1 -164 6894 6045 2 1478 5059 234 52 30 chrX 117147282 117149310 -49500986 + Lx5 LINE L1 4974 7043 -7 2 1478 266 0 29 0 chrX 117150277 117150311 -49499985 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 2 1478 7791 131 61 9 chrX 117150312 117151805 -49498491 - Lx3A LINE L1 -16 6965 5422 2 1478 14322 111 20 14 chrX 117151803 117154154 -49496142 + L1_Mur1 LINE L1 2542 4908 -978 2 1478 509 296 0 34 chrX 117154714 117154833 -49495463 - RSINE1 SINE B4 -36 129 15 2 1478 452 48 16 0 chrX 117154850 117154913 -49495383 + (TA)n Simple_repeat Simple_repeat 2 65 0 2 1478 675 327 0 0 chrX 117154938 117155094 -49495202 - B3 SINE B2 -59 157 2 2 1478 488 282 169 51 chrX 117155139 117155412 -49494884 + RLTR28B LTR ERVL 1 305 -176 2 1478 235 253 10 125 chrX 117155463 117155567 -49494729 + RLTR28B LTR ERVL 412 503 -21 2 1478 448 300 73 0 chrX 117156115 117156265 -49494031 + MER92B LTR ERV1 26 186 -450 2 1478 225 266 31 0 chrX 117156276 117156340 -49493956 + MTD LTR MaLR 2 67 -312 2 1478 315 0 0 0 chrX 117156611 117156646 -49493650 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1478 1209 268 78 3 chrX 117156658 117156991 -49493305 + MTD LTR MaLR 62 419 0 2 1478 25 31 0 0 chrX 117157634 117157666 -49492630 + AT_rich Low_complexity Low_complexity 1 32 0 2 1478 342 0 0 0 chrX 117157721 117157759 -49492537 + (A)n Simple_repeat Simple_repeat 1 38 0 2 1478 2152 233 58 31 chrX 117157929 117158482 -49491814 + RMER20B LTR ERVK 1 568 -59 2 1478 693 0 0 0 chrX 117158684 117158761 -49491535 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 2 1478 483 130 0 0 chrX 117159745 117159822 -49490474 + (CA)n Simple_repeat Simple_repeat 2 78 0 2 1478 602 342 32 0 chrX 117160877 117161096 -49489200 - ORR1E LTR MaLR -121 238 13 2 1478 234 0 0 0 chrX 117161157 117161183 -49489113 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1478 546 57 0 0 chrX 117161183 117161252 -49489044 + (TA)n Simple_repeat Simple_repeat 2 71 0 2 1478 447 328 126 43 chrX 117161419 117161817 -49488479 - L1MDb LINE L1 -5314 1095 665 2 1478 385 336 68 38 chrX 117162372 117162638 -49487658 - L1MDb LINE L1 -6125 284 11 2 1478 265 79 0 0 chrX 117163395 117163433 -49486863 + B2_Mm2 SINE B2 1 38 -157 2 1478 1829 167 5 81 chrX 117163480 117163865 -49486431 + RLTR41 LTR ERV1 91 446 0 2 1478 2504 94 6 6 chrX 117165193 117165558 -49484738 + L1_Mus3 LINE L1 6270 6634 -4 2 1478 340 26 0 0 chrX 117165564 117165602 -49484694 + L1Md_F2 LINE L1 5549 5586 -297 2 1478 8081 47 0 0 chrX 117165602 117166584 -49483712 + L1Md_F2 LINE L1 5587 6568 -14 2 1478 440 313 93 16 chrX 117166620 117166987 -49483309 + MuRRS4-int LTR ERV1 1350 1744 -3319 2 1478 1244 130 0 0 chrX 117167323 117167508 -49482788 + B2_Mm2 SINE B2 2 186 -9 2 1478 1692 308 82 72 chrX 117167722 117169501 -49480795 + MuRRS4-int LTR ERV1 2302 4270 -3331 2 1478 577 268 80 5 chrX 117169951 117170150 -49480146 - MuRRS4-int LTR ERV1 -1043 4020 3807 2 1478 511 293 42 9 chrX 117170591 117170808 -49479488 + MuRRS4-int LTR ERV1 4666 4889 -174 2 1478 2051 159 39 51 chrX 117170969 117171359 -49478937 + RLTR41 LTR ERV1 62 446 0 2 1478 1010 102 14 0 chrX 117171359 117171504 -49478792 + B2_Mm1t SINE B2 38 184 -9 2 1478 4678 83 2 9 chrX 117171826 117172460 -49477836 - L1_Mus2 LINE L1 0 6566 5938 2 1478 2358 47 12 16 chrX 117172460 117172719 -49477577 + L1_Mus2 LINE L1 5618 5880 -686 2 1478 3375 86 9 0 chrX 117172719 117173162 -49477134 - LTRIS5 LTR ERV1 0 447 1 2 1478 2358 47 12 16 chrX 117173162 117173223 -49477073 + L1_Mus2 LINE L1 5881 5937 -629 2 1478 297 0 0 0 chrX 117173370 117173403 -49476893 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1478 405 58 0 0 chrX 117173403 117173454 -49476842 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1478 234 0 0 0 chrX 117173455 117173481 -49476815 + (GA)n Simple_repeat Simple_repeat 1 26 0 2 1478 1800 163 35 173 chrX 117173482 117173963 -49476333 + RLTR23 LTR ERV1 9 423 -7 2 1478 651 26 0 0 chrX 117173964 117174041 -49476255 + (TG)n Simple_repeat Simple_repeat 1 77 0 2 1478 27 0 0 0 chrX 117174356 117174383 -49475913 + AT_rich Low_complexity Low_complexity 1 27 0 2 1478 32 0 0 0 chrX 117174545 117174577 -49475719 + AT_rich Low_complexity Low_complexity 1 32 0 2 1478 663 315 107 38 chrX 117174601 117175235 -49475061 + L1M4 LINE L1 2350 3030 -3113 2 1478 2201 208 24 12 chrX 117175483 117175990 -49474306 - Lx3C LINE L1 0 6976 6464 2 1478 2974 189 36 24 chrX 117175992 117176690 -49473606 - Lx3C LINE L1 -630 6346 5641 2 1478 4614 147 8 22 chrX 117176855 117177194 -49473102 + Lx2 LINE L1 6236 6572 -425 2 1478 2977 38 0 0 chrX 117177194 117177540 -49472756 - ORR1A0 LTR MaLR 0 346 1 2 1478 4614 147 8 22 chrX 117177540 117177971 -49472325 + Lx2 LINE L1 6573 6995 -2 2 1478 222 222 0 18 chrX 117178247 117178302 -49471994 + T-rich Low_complexity Low_complexity 2 55 0 2 1479 257 290 66 20 chrX 117179434 117179631 -49470665 + L1M4 LINE L1 4294 4499 -1647 2 1479 571 339 15 61 chrX 117179907 117180105 -49470191 - B3 SINE B2 -27 189 1 2 1479 517 296 30 55 chrX 117180474 117180710 -49469586 + RLTR40 LTR ERVK 1 230 -587 2 1479 495 33 0 0 chrX 117180764 117180825 -49469471 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 1479 594 143 0 0 chrX 117180825 117180958 -49469338 + (GA)n Simple_repeat Simple_repeat 2 134 0 2 1479 254 183 0 32 chrX 117181539 117181601 -49468695 + (TATATG)n Simple_repeat Simple_repeat 4 63 0 2 1479 511 279 14 21 chrX 117182589 117182669 -49467627 - RLTR20C LTR ERVK -12 522 444 2 1479 492 48 0 0 chrX 117182669 117182732 -49467564 + (CA)n Simple_repeat Simple_repeat 2 64 0 2 1479 511 279 14 21 chrX 117182732 117182794 -49467502 - RLTR20C LTR ERVK -91 443 381 2 1479 414 0 0 0 chrX 117183227 117183273 -49467023 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 1479 26 82 0 0 chrX 117184081 117184142 -49466154 + AT_rich Low_complexity Low_complexity 1 61 0 2 1479 31 26 0 0 chrX 117184210 117184248 -49466048 + AT_rich Low_complexity Low_complexity 1 38 0 2 1479 345 307 33 48 chrX 117184317 117184653 -49465643 + L1VL1 LINE L1 177 522 -5900 2 1479 303 264 23 15 chrX 117184641 117184772 -49465524 + L1_Mus1 LINE L1 666 797 -5819 2 1479 19544 136 45 12 chrX 117184784 117188879 -49461417 + L1_Mus1 LINE L1 725 4962 -921 2 1479 6872 93 11 2 chrX 117188877 117190068 -49460228 + L1_Mus1 LINE L1 5366 6567 0 2 1479 6625 166 66 53 chrX 117190417 117193264 -49457032 - L1_Mus3 LINE L1 -7 6631 3737 2 1479 2262 116 217 26 chrX 117193264 117193724 -49456572 - RLTR6_Mm LTR ERV1 -70 584 37 2 1479 64149 16 13 0 chrX 117193833 117201517 -49448779 - RLTR6-int LTR ERV1 0 7778 1 2 1479 2043 172 142 81 chrX 117201517 117202087 -49448209 - RLTR6_Mm LTR ERV1 -49 605 1 2 1479 14473 134 15 7 chrX 117202087 117205054 -49445242 - L1_Mus3 LINE L1 -2143 3740 744 2 1479 354 290 34 7 chrX 117205083 117205229 -49445067 - L1_Mus3 LINE L1 -5801 815 666 2 1479 292 320 8 64 chrX 117205238 117205502 -49444794 - L1VL1 LINE L1 -5918 504 256 2 1479 1043 253 86 29 chrX 117205839 117206189 -49444107 + ORR1D1 LTR MaLR 5 374 0 2 1479 741 335 93 36 chrX 117206815 117207171 -49443125 - MTEa LTR MaLR 0 379 4 2 1479 2044 96 78 13 chrX 117207171 117207478 -49442818 - ORR1A2 LTR MaLR 0 327 1 2 1479 1088 244 31 65 chrX 117208499 117208789 -49441507 - ORR1D1 LTR MaLR -94 280 1 2 1479 4602 110 29 1 chrX 117208970 117209690 -49440606 + Lx3_Mus LINE L1 6112 6851 -158 2 1479 35 41 0 0 chrX 117209706 117209755 -49440541 + AT_rich Low_complexity Low_complexity 1 49 0 2 1479 25 0 0 0 chrX 117209971 117209996 -49440300 + AT_rich Low_complexity Low_complexity 1 25 0 2 1479 279 127 48 0 chrX 117212479 117212542 -49437754 + (TTA)n Simple_repeat Simple_repeat 3 68 0 2 1479 42 100 0 0 chrX 117212669 117212809 -49437487 + AT_rich Low_complexity Low_complexity 1 140 0 2 1479 310 152 0 0 chrX 117212817 117212863 -49437433 + HAL1-3A_ME LINE L1 1976 2021 -837 2 1479 718 238 6 101 chrX 117213103 117213436 -49436860 + ORR1B2 LTR MaLR 28 302 -68 2 1479 33 25 0 0 chrX 117213995 117214035 -49436261 + AT_rich Low_complexity Low_complexity 1 40 0 2 1479 2903 110 133 2 chrX 117214147 117214604 -49435692 - L1_Mus4 LINE L1 0 6636 6120 2 1479 861 223 121 90 chrX 117214604 117214959 -49435337 - RLTR9A LTR ERVK 0 368 3 2 1479 425 257 158 11 chrX 117215244 117215421 -49434875 - ETnERV2-int LTR ERVK -981 6425 6223 2 1479 11552 150 59 22 chrX 117215612 117216893 -49433403 - RMER16-int LTR ERVK -1233 4173 2877 2 1479 369 0 0 0 chrX 117216893 117216934 -49433362 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 1479 11552 150 59 22 chrX 117216934 117217962 -49432334 - RMER16-int LTR ERVK -2530 2876 1781 2 1479 7090 59 15 4 chrX 117218003 117219113 -49431183 - L1Md_F3 LINE L1 -15 6569 5447 2 1479 1094 43 35 69 chrX 117219121 117219295 -49431001 - L1Md_F2 LINE L1 -14 6568 6401 2 1479 1540 55 0 19 chrX 117219295 117219501 -49430795 + L1Md_F2 LINE L1 6183 6384 -198 2 1479 5316 163 50 20 chrX 117219491 117220651 -49429645 - L1_Mur1 LINE L1 -1945 3941 2747 2 1479 5286 209 33 15 chrX 117221101 117222636 -49427660 + Lx5 LINE L1 5265 6845 -205 2 1479 558 0 0 0 chrX 117222652 117222714 -49427582 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 1479 250 234 138 15 chrX 117222714 117222844 -49427452 + RMER10B LTR ERVL 165 310 -88 2 1479 378 107 0 0 chrX 117222946 117223002 -49427294 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 1479 222 399 108 12 chrX 117223074 117223399 -49426897 + L2 LINE L2 1155 1510 -1909 2 1479 441 300 70 12 chrX 117223406 117223578 -49426718 + Lx8 LINE L1 6257 6438 -1035 2 1479 281 359 57 57 chrX 117223581 117223844 -49426452 + Lx8 LINE L1 7202 7464 -9 2 1479 21 36 0 0 chrX 117224338 117224366 -49425930 + AT_rich Low_complexity Low_complexity 1 28 0 2 1479 1635 260 68 34 chrX 117226026 117226524 -49423772 - RLTR17 LTR ERVK -73 619 105 2 1479 1536 305 47 39 chrX 117226627 117227312 -49422984 - Lx9 LINE L1 -451 7193 6504 2 1479 455 258 39 29 chrX 117227446 117227650 -49422646 - Lx7 LINE L1 0 7696 7491 2 1479 2888 151 27 4 chrX 117227738 117228251 -49422045 - Lx2 LINE L1 -457 6540 6016 2 1479 25 31 0 0 chrX 117228255 117228287 -49422009 + AT_rich Low_complexity Low_complexity 1 32 0 2 1479 189 0 0 0 chrX 117229273 117229294 -49421002 + (ATG)n Simple_repeat Simple_repeat 2 22 0 2 1479 342 0 0 0 chrX 117229294 117229332 -49420964 + (GGA)n Simple_repeat Simple_repeat 2 39 0 2 1479 244 292 0 0 chrX 117229352 117229424 -49420872 + GA-rich Low_complexity Low_complexity 2 73 0 2 1479 200 222 0 0 chrX 117229461 117229506 -49420790 + T-rich Low_complexity Low_complexity 1 45 0 2 1479 21 57 0 0 chrX 117230146 117230181 -49420115 + AT_rich Low_complexity Low_complexity 1 35 0 3 1479 885 116 55 50 chrX 117230931 117231113 -49419183 + B2_Mm2 SINE B2 5 187 -8 3 1479 1024 58 64 6 chrX 117231113 117231270 -49419026 - L1_Mus3 LINE L1 -8 6630 6465 3 1479 2925 130 0 0 chrX 117231270 117231701 -49418595 - Lx2 LINE L1 -31 5852 5422 2 1479 10088 121 29 10 chrX 117231705 117234172 -49416124 - L1VL1 LINE L1 -979 2719 207 3 1479 183 317 82 16 chrX 117235214 117235336 -49414960 - MIRc SINE MIR -22 246 117 3 1479 186 43 0 0 chrX 117235618 117235641 -49414655 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 3 1479 226 178 22 22 chrX 117235642 117235688 -49414608 + RMER19C LTR ERVK 57 102 -509 3 1479 360 294 89 39 chrX 117236011 117236330 -49413966 - Lx7 LINE L1 -1029 6444 6109 3 1479 1612 234 169 53 chrX 117237112 117237757 -49412539 - RMER6D LTR ERVK 0 720 1 3 1479 552 336 66 83 chrX 117238143 117238506 -49411790 + ORR1E LTR MaLR 3 359 0 3 1479 204 40 0 0 chrX 117238698 117238723 -49411573 + (TAA)n Simple_repeat Simple_repeat 1 25 0 3 1479 458 33 0 16 chrX 117238726 117238787 -49411509 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 1479 937 145 7 0 chrX 117239239 117239384 -49410912 + B1_Mus1 SINE Alu 1 146 -2 3 1479 424 81 13 13 chrX 117239575 117239650 -49410646 + (TA)n Simple_repeat Simple_repeat 2 76 0 3 1479 180 152 0 0 chrX 117239655 117239688 -49410608 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1479 243 0 0 0 chrX 117239694 117239721 -49410575 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 1479 225 300 0 0 chrX 117239736 117239786 -49410510 - ID2 SINE ID -1 82 33 3 1479 284 287 0 103 chrX 117240059 117240195 -49410101 - MLT1A1 LTR MaLR 0 408 287 3 1479 3564 22 57 51 chrX 117240515 117240987 -49409309 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1479 827 126 0 16 chrX 117241481 117241610 -49408686 - L1_Mus3 LINE L1 -391 6247 6121 3 1479 5067 201 65 79 chrX 117241583 117241805 -49408491 - L1_Mm LINE L1 -283 5600 5381 3 1479 2269 127 21 8 chrX 117241805 117242187 -49408109 + L1_Mus3 LINE L1 6252 6638 0 3 1479 5067 201 65 79 chrX 117242187 117242452 -49407844 - L1_Mm LINE L1 -503 5380 5178 3 1479 1140 79 0 0 chrX 117242452 117242630 -49407666 + (GAA)n Simple_repeat Simple_repeat 3 180 0 3 1479 621 0 0 0 chrX 117242635 117242704 -49407592 + (GAAA)n Simple_repeat Simple_repeat 3 71 0 3 1479 5067 201 65 79 chrX 117242704 117243634 -49406662 - Lx LINE L1 -707 5176 4197 3 1479 6260 157 43 4 chrX 117243648 117245044 -49405252 + Lx LINE L1 5184 6646 -8 3 1479 273 57 0 0 chrX 117245049 117245084 -49405212 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1479 214 228 24 60 chrX 117245141 117245225 -49405071 + (TTTG)n Simple_repeat Simple_repeat 4 84 0 3 1479 1028 113 0 0 chrX 117245523 117245664 -49404632 - B1_Mus2 SINE Alu -6 141 1 3 1479 216 97 0 0 chrX 117245803 117245834 -49404462 + (GGAA)n Simple_repeat Simple_repeat 3 33 0 3 1479 1018 99 12 0 chrX 117245834 117245996 -49404300 + (GA)n Simple_repeat Simple_repeat 1 164 0 3 1479 270 116 0 0 chrX 117246015 117246058 -49404238 + (TCTG)n Simple_repeat Simple_repeat 4 46 0 3 1479 285 29 0 0 chrX 117246186 117246220 -49404076 + (GGAA)n Simple_repeat Simple_repeat 3 36 0 3 1479 298 250 110 43 chrX 117247031 117247084 -49403212 - B2_Mm2 SINE B2 -19 176 3 3 1479 568 211 73 9 chrX 117247084 117247194 -49403102 - RSINE1 SINE B4 -45 120 4 3 1479 258 368 50 17 chrX 117247253 117247372 -49402924 - RSINE1 SINE B4 -31 134 12 3 1479 30 0 0 0 chrX 117248074 117248104 -49402192 + AT_rich Low_complexity Low_complexity 1 30 0 3 1479 2215 136 97 18 chrX 117248591 117248999 -49401297 + RMER17B LTR ERVK 1 418 -540 3 1479 513 47 0 0 chrX 117251268 117251332 -49398964 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 1479 1155 203 33 33 chrX 117251333 117251603 -49398693 + RMER19C LTR ERVK 342 611 0 3 1479 22 35 0 0 chrX 117251734 117251763 -49398533 + AT_rich Low_complexity Low_complexity 1 29 0 3 1479 7091 176 104 5 chrX 117251763 117253527 -49396769 - Lx4A LINE L1 -1 7057 5110 3 1479 542 357 12 36 chrX 117253528 117253778 -49396518 + RLTR16 LTR ERVK 1 244 -261 3 1479 350 42 21 0 chrX 117254100 117254148 -49396148 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 3 1479 900 172 11 11 chrX 117254161 117254337 -49395959 - L1_Mur2 LINE L1 -761 5116 4941 3 1479 3622 175 8 18 chrX 117254338 117255082 -49395214 - L1_Mur2 LINE L1 -1860 4017 3281 3 1479 405 0 0 0 chrX 117255084 117255129 -49395167 + (TTA)n Simple_repeat Simple_repeat 1 45 0 3 1479 2888 212 31 31 chrX 117255129 117255780 -49394516 - Lx2B LINE L1 -17 6983 6333 3 1479 8743 62 0 1 chrX 117255775 117256885 -49393411 - L1Md_F2 LINE L1 -127 5759 4634 3 1479 6748 50 2 2 chrX 117256885 117257724 -49392572 + L1Md_F2 LINE L1 5744 6582 0 3 1479 6317 205 75 6 chrX 117257724 117258171 -49392125 - L1_Mm LINE L1 -1253 4633 4096 3 1479 5356 151 24 13 chrX 117258172 117259089 -49391207 + RMER17B LTR ERVK 3 929 -29 3 1479 2608 193 25 7 chrX 117259093 117259641 -49390655 - L1_Mm LINE L1 -1788 4089 3532 3 1479 2626 181 43 14 chrX 117259618 117260609 -49389687 - L1VL4 LINE L1 -2141 1418 397 3 1479 510 70 0 0 chrX 117260639 117260710 -49389586 + (TC)n Simple_repeat Simple_repeat 2 72 0 3 1479 1681 177 48 41 chrX 117260731 117261173 -49389123 - L1_Mm LINE L1 -2629 3248 2804 3 1479 5723 188 23 11 chrX 117261168 117262793 -49387503 + L1_Mur2 LINE L1 3130 4279 -1598 3 1479 608 156 555 8 chrX 117262786 117262994 -49387302 + L1_Mur2 LINE L1 2472 2815 -3062 3 1479 549 30 0 0 chrX 117262994 117263061 -49387235 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 1479 405 0 0 0 chrX 117263061 117263105 -49387191 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 1479 608 156 555 8 chrX 117263105 117263140 -49387156 + L1_Mur2 LINE L1 2816 2849 -3028 3 1479 31665 110 47 3 chrX 117263644 117265229 -49385067 + L1Md_F2 LINE L1 324 1958 -3925 3 1479 180 0 0 0 chrX 117265229 117265249 -49385047 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1479 31665 84 30 4 chrX 117265249 117269142 -49381154 + L1Md_F2 LINE L1 1959 5971 -611 3 1479 534 259 183 50 chrX 117269142 117269382 -49380914 - RLTR10A LTR ERVK 0 411 140 3 1479 2000 300 42 51 chrX 117269421 117271985 -49378311 - IAP-d-int LTR ERVK -202 7042 3232 3 1479 2278 32 35 3 chrX 117271991 117272300 -49377996 - L1Md_F3 LINE L1 0 6584 6294 3 1479 832 254 81 66 chrX 117272328 117272750 -49377546 - IAP-d-int LTR ERVK -3870 2672 2245 3 1479 564 241 183 50 chrX 117273099 117273339 -49376957 - RLTR10A LTR ERVK 0 411 140 3 1479 4505 89 0 10 chrX 117273385 117274012 -49376284 + L1Md_F2 LINE L1 5960 6580 -2 3 1479 23 33 0 0 chrX 117274128 117274158 -49376138 + AT_rich Low_complexity Low_complexity 1 30 0 3 1479 27 0 0 0 chrX 117275680 117275707 -49374589 + AT_rich Low_complexity Low_complexity 1 27 0 3 1479 23 54 0 0 chrX 117276881 117276918 -49373378 + AT_rich Low_complexity Low_complexity 1 37 0 3 1479 226 333 140 48 chrX 117277552 117277620 -49372676 - L2a LINE L2 -90 3336 3268 3 1479 285 98 0 0 chrX 117277620 117277661 -49372635 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1479 226 333 140 48 chrX 117277661 117277863 -49372433 - L2a LINE L2 -159 3267 3042 3 1479 1637 301 48 33 chrX 117278140 117278744 -49371552 - Lx6 LINE L1 -2 7458 6846 3 1479 258 148 0 0 chrX 117278757 117278811 -49371485 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 1479 614 269 82 62 chrX 117278993 117279298 -49370998 + RMER10A LTR ERVL 123 433 -9 3 1479 261 0 0 0 chrX 117279588 117279617 -49370679 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 3 1479 1023 119 0 0 chrX 117279617 117279760 -49370536 - B1_Mus1 SINE Alu -2 146 4 3 1479 2152 227 98 68 chrX 117279824 117280415 -49369881 + RMER19C LTR ERVK 1 609 -2 3 1479 1606 236 64 4 chrX 117281039 117281280 -49369016 - L1_Mur3 LINE L1 -2116 3764 3479 3 1479 312 70 0 0 chrX 117281280 117281323 -49368973 + (TTG)n Simple_repeat Simple_repeat 2 44 0 3 1479 1606 229 44 5 chrX 117281323 117281607 -49368689 - L1_Mur3 LINE L1 -2399 3478 3190 3 1479 315 208 69 0 chrX 117281894 117281966 -49368330 - RLTR21 LTR ERVK -155 1417 1341 3 1479 3955 203 142 21 chrX 117282006 117282196 -49368100 - RMER12 LTR ERVK -181 1141 907 3 1479 1847 141 48 9 chrX 117282196 117282511 -49367785 + ORR1A2 LTR MaLR 1 327 0 3 1479 3955 203 142 21 chrX 117282511 117283338 -49366958 - RMER12 LTR ERVK -416 906 2 3 1479 333 171 0 0 chrX 117283660 117283730 -49366566 - L1_Mur3 LINE L1 -2679 3198 3129 3 1479 4939 125 13 18 chrX 117283730 117284522 -49365774 - Lx LINE L1 -1 6653 5866 3 1479 978 199 29 61 chrX 117284551 117284829 -49365467 + RMER17C LTR ERVK 16 284 -126 3 1479 4577 201 6 69 chrX 117284829 117285359 -49364937 - L1_Mm LINE L1 -127 5756 5288 3 1479 4417 92 7 0 chrX 117285359 117285960 -49364336 - L1_Mus1 LINE L1 -1 6566 5962 3 1479 4577 201 6 69 chrX 117285960 117286160 -49364136 - L1_Mm LINE L1 -596 5287 5092 3 1479 1692 217 24 118 chrX 117286160 117286652 -49363644 + RLTR41 LTR ERV1 1 446 0 3 1479 4577 201 6 69 chrX 117286652 117286995 -49363301 - L1_Mm LINE L1 -792 5091 4750 3 1479 32325 96 3 12 chrX 117287008 117292547 -49357749 - L1Md_F2 LINE L1 -19 6563 1087 3 1479 321 47 0 0 chrX 117293347 117293390 -49356906 + (TAAAA)n Simple_repeat Simple_repeat 2 44 0 3 1479 5014 172 11 73 chrX 117293395 117294562 -49355734 - L1Md_F2 LINE L1 -5553 1063 98 3 1479 2902 148 32 17 chrX 117294577 117295100 -49355196 + L1_Mur2 LINE L1 4192 4722 -1155 3 1479 7201 226 32 28 chrX 117295098 117297242 -49353054 - L1_Mur3 LINE L1 -2739 3138 985 3 1479 27 73 0 0 chrX 117298411 117298466 -49351830 + AT_rich Low_complexity Low_complexity 1 55 0 3 1479 201 39 0 0 chrX 117298764 117298790 -49351506 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1479 1683 338 58 18 chrX 117299748 117300479 -49349817 - MTE-int LTR MaLR -8 1572 672 3 1479 938 325 41 3 chrX 117300481 117300799 -49349497 - MTE-int LTR MaLR -1247 333 4 3 1479 488 361 70 9 chrX 117300824 117301165 -49349131 + Lx8 LINE L1 6589 6950 -523 3 1479 918 0 0 0 chrX 117301331 117301433 -49348863 + (GAGAA)n Simple_repeat Simple_repeat 4 105 0 3 1479 13494 114 10 14 chrX 117301632 117304481 -49345815 + L1_Mus2 LINE L1 3730 6562 -4 3 1479 249 337 11 0 chrX 117304488 117304580 -49345716 - MTE2a LTR MaLR -43 336 244 3 1479 637 231 0 19 chrX 117304583 117304742 -49345554 + Lx9 LINE L1 6962 7117 -527 3 1479 380 276 156 29 chrX 117304718 117305065 -49345231 + L1_Mur2 LINE L1 3525 3938 -2208 3 1479 480 312 109 67 chrX 117305143 117305428 -49344868 + MLT1B LTR MaLR 66 362 -28 3 1479 776 30 10 0 chrX 117305457 117305556 -49344740 + (TG)n Simple_repeat Simple_repeat 1 100 0 3 1479 414 206 10 10 chrX 117305556 117305654 -49344642 - RMER1B Other Other -41 1025 928 3 1479 2443 55 26 0 chrX 117305687 117305994 -49344302 + Lx3_Mus LINE L1 6566 6880 -129 3 1479 467 93 0 0 chrX 117306004 117306085 -49344211 - L1_Mm LINE L1 -1698 4188 4108 3 1479 6549 168 59 37 chrX 117306143 117306849 -49343447 - MurERV4_19-int LTR ERVK -355 5425 4750 3 1479 5063 116 1 3 chrX 117306849 117307590 -49342706 - L1_Mus4 LINE L1 -7 6629 5890 3 1479 6549 168 59 37 chrX 117307590 117308302 -49341994 - MurERV4_19-int LTR ERVK -1031 4749 3978 3 1479 1278 114 14 9 chrX 117308302 117308514 -49341782 - L1_Mus3 LINE L1 0 6638 6426 3 1479 2877 217 2 16 chrX 117308531 117309089 -49341207 + Lx5 LINE L1 6268 6817 -233 4 184 308 345 71 60 chrX 117309363 117309545 -49340751 + MLT1D LTR MaLR 309 492 -13 4 1480 820 78 0 0 chrX 117309907 117310009 -49340287 + L1Md_F2 LINE L1 5491 5592 -291 4 1480 7414 49 2 0 chrX 117310010 117310926 -49339370 + L1Md_F2 LINE L1 5664 6581 -1 4 1480 1019 304 63 6 chrX 117310965 117311312 -49338984 - MTEb LTR MaLR -8 371 5 4 1480 870 192 70 0 chrX 117311399 117311571 -49338725 + RMER6D LTR ERVK 1 184 -536 4 1480 1340 186 142 0 chrX 117311575 117311849 -49338447 - RMER6D LTR ERVK -407 313 1 4 1480 537 16 0 0 chrX 117312152 117312214 -49338082 + (TTTTG)n Simple_repeat Simple_repeat 2 63 0 4 1480 1510 183 19 22 chrX 117312271 117312589 -49337707 - Lx LINE L1 -3 6651 6335 4 1480 1849 158 13 3 chrX 117312591 117312902 -49337394 + Lx LINE L1 5976 6289 -365 4 1480 1252 232 38 0 chrX 117313017 117313284 -49337012 - Lx9 LINE L1 -166 7478 7202 4 1480 35 24 0 0 chrX 117313602 117313644 -49336652 + AT_rich Low_complexity Low_complexity 1 42 0 4 1480 274 361 31 0 chrX 117313684 117313814 -49336482 - MIR SINE MIR -8 254 121 4 1480 210 37 0 0 chrX 117313822 117313849 -49336447 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1480 2046 162 37 15 chrX 117314922 117315324 -49334972 + RMER6-int LTR ERVK 2753 3163 -14 4 1480 2169 193 187 14 chrX 117315337 117315846 -49334450 + RMER6C LTR ERVK 1 615 -75 4 1480 252 0 0 0 chrX 117315846 117315874 -49334422 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1480 2169 193 187 14 chrX 117315874 117315952 -49334344 + RMER6C LTR ERVK 616 690 0 4 1480 1438 220 107 42 chrX 117315963 117316285 -49334011 + RMER6B LTR ERVK 3 341 -120 4 1480 248 91 0 22 chrX 117316285 117316330 -49333966 + (TTG)n Simple_repeat Simple_repeat 3 46 0 4 1480 1438 220 107 42 chrX 117316330 117316438 -49333858 + RMER6B LTR ERVK 342 460 -1 4 1480 2001 237 13 3 chrX 117316638 117317128 -49333168 - Lx4B LINE L1 -174 6826 6323 4 1480 3055 192 36 30 chrX 117317125 117317846 -49332450 - L1_Mur1 LINE L1 -2900 2977 2253 4 1480 2733 124 19 0 chrX 117317848 117318268 -49332028 - L1_Mus3 LINE L1 0 6638 6211 4 1480 2122 96 7 7 chrX 117318268 117318571 -49331725 + L1_Mus3 LINE L1 5917 6219 -347 4 1480 1694 226 54 51 chrX 117318567 117318774 -49331522 - L1_Mur1 LINE L1 -3612 2265 2044 4 1480 468 51 0 0 chrX 117318774 117318833 -49331463 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1480 1694 226 54 51 chrX 117318833 117319176 -49331120 - L1_Mur1 LINE L1 -3834 2043 1714 4 1480 491 174 5 193 chrX 117319177 117319417 -49330879 - L1_Mur1 LINE L1 -4505 1381 1187 4 1480 1182 101 69 15 chrX 117319420 117319622 -49330674 + L1_Mus3 LINE L1 6426 6638 0 4 1480 266 335 19 6 chrX 117319674 117319830 -49330466 + L1_Mm LINE L1 4445 4602 -1281 4 1480 1037 98 17 6 chrX 117319962 117320137 -49330159 + (GAA)n Simple_repeat Simple_repeat 1 177 0 4 1480 6445 159 65 55 chrX 117320315 117322073 -49328223 + RLTR45-int LTR ERVK 2796 5907 -1337 4 1480 1331 153 79 0 chrX 117322074 117322302 -49327994 + ETnERV3-int LTR ERVK 5529 5774 -34 4 1480 5077 77 17 16 chrX 117322321 117323023 -49327273 + RLTR13D5 LTR ERVK 1 703 -320 4 1480 259 204 116 62 chrX 117323045 117323191 -49327105 + ETnERV3-int LTR ERVK 6698 6851 -1366 4 1480 398 283 0 0 chrX 117323358 117323478 -49326818 + ETnERV3-int LTR ERVK 7642 7761 -456 4 1480 577 293 7 0 chrX 117323576 117323726 -49326570 + ETnERV2-int LTR ERVK 6496 6646 -760 4 1480 680 277 4 33 chrX 117324462 117324705 -49325591 + L1_Rod LINE L1 5601 5836 -11 4 1480 607 296 82 22 chrX 117325001 117325184 -49325112 - B3 SINE B2 -4 212 19 4 1480 200 208 19 0 chrX 117325275 117325328 -49324968 + (TTTG)n Simple_repeat Simple_repeat 2 55 0 4 1480 5896 104 22 27 chrX 117325354 117326257 -49324039 - L1_Mus2 LINE L1 0 6566 5668 4 1480 1131 120 32 0 chrX 117326228 117326498 -49323798 - L1VL4 LINE L1 -2501 1058 781 4 1480 2003 168 14 73 chrX 117326548 117327013 -49323283 - ETnERV2-int LTR ERVK -4549 2857 2454 4 1480 3511 109 18 11 chrX 117327016 117327581 -49322715 - ETnERV2-int LTR ERVK -5333 2073 1505 4 1480 1653 100 82 123 chrX 117327581 117327946 -49322350 + RLTR45-int LTR ERVK 2148 2497 -4747 4 1480 369 325 52 58 chrX 117327946 117328256 -49322040 - L1VL2 LINE L1 -5943 392 85 4 1480 22 35 0 0 chrX 117328258 117328287 -49322009 + AT_rich Low_complexity Low_complexity 1 29 0 4 1480 3638 132 5 20 chrX 117328435 117329023 -49321273 + Lx LINE L1 6073 6651 -3 4 1480 25 65 0 0 chrX 117329630 117329676 -49320620 + AT_rich Low_complexity Low_complexity 1 46 0 4 1480 22 56 0 0 chrX 117329920 117329956 -49320340 + AT_rich Low_complexity Low_complexity 1 36 0 4 1480 594 0 0 0 chrX 117330374 117330440 -49319856 + (TC)n Simple_repeat Simple_repeat 2 67 0 4 1480 3485 157 36 9 chrX 117330442 117330475 -49319821 - Lx2 LINE L1 -13 6984 6952 4 1480 3231 43 2 15 chrX 117330475 117330876 -49319420 + MTA_Mm LTR MaLR 1 396 0 4 1480 3485 157 36 9 chrX 117330876 117331474 -49318822 - Lx2 LINE L1 -46 6951 6337 4 1480 927 65 56 35 chrX 117331515 117331532 -49318764 - B1_Mm SINE Alu 0 147 135 4 1480 320 0 0 24 chrX 117331532 117331573 -49318723 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 4 1480 927 65 56 35 chrX 117331573 117331698 -49318598 - B1_Mm SINE Alu -13 134 2 4 1480 31 0 0 0 chrX 117331706 117331737 -49318559 + AT_rich Low_complexity Low_complexity 1 31 0 4 1480 1364 360 74 18 chrX 117331815 117332711 -49317585 - Lx8 LINE L1 -195 7278 6333 4 1480 484 119 0 0 chrX 117332841 117332908 -49317388 - B1_Mus2 SINE Alu -79 68 2 4 1480 347 239 0 0 chrX 117332849 117332916 -49317380 - ID_B1 SINE B4 -83 141 75 4 1480 1801 163 27 0 chrX 117332933 117333233 -49317063 - Lx2 LINE L1 -2 6995 6688 4 1480 428 227 11 0 chrX 117333300 117333388 -49316908 + Lx8 LINE L1 6777 6865 -608 4 1480 220 281 124 10 chrX 117333507 117333604 -49316692 - PB1D7 SINE Alu -19 130 23 4 1480 483 63 0 0 chrX 117333673 117333736 -49316560 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 1480 384 21 0 0 chrX 117333736 117333778 -49316518 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1480 825 236 50 21 chrX 117333916 117334158 -49316138 + RLTR15 LTR ERVK 100 348 -11 4 1480 902 182 16 11 chrX 117334168 117334351 -49315945 - RLTR12A LTR ERVK 0 568 385 4 1480 293 324 71 44 chrX 117334561 117334674 -49315622 + ID_B1 SINE B4 90 205 -19 4 1480 430 37 62 0 chrX 117334793 117334874 -49315422 + (TA)n Simple_repeat Simple_repeat 1 86 0 4 1480 405 329 36 63 chrX 117335289 117335531 -49314765 + Lx4A LINE L1 868 1103 -6625 4 1480 216 0 0 0 chrX 117335531 117335555 -49314741 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1480 405 329 36 63 chrX 117335555 117335759 -49314537 + Lx4A LINE L1 1104 1302 -6426 4 1480 1418 263 38 6 chrX 117335767 117336237 -49314059 + Lx4A LINE L1 2289 2773 -3107 4 1480 4034 11 0 0 chrX 117336234 117336693 -49313603 + L1Md_T LINE L1 5128 5586 -297 4 1480 8423 32 0 0 chrX 117336693 117337688 -49312608 + L1Md_T LINE L1 5587 6581 -1 4 1480 1025 241 75 16 chrX 117337695 117338079 -49312217 + Lx4A LINE L1 2808 3214 -2666 4 1480 424 248 30 54 chrX 117338334 117338500 -49311796 + RNLTR23 LTR ERVK 481 642 0 4 1480 259 262 19 10 chrX 117338501 117338605 -49311691 + Lx4A LINE L1 3208 3312 -2568 4 1480 414 232 0 0 chrX 117338759 117338854 -49311442 + L1_Mur2 LINE L1 634 728 -5984 4 1480 195 234 0 0 chrX 117338883 117338960 -49311336 + (TTTA)n Simple_repeat Simple_repeat 1 77 0 4 1480 1947 66 18 18 chrX 117339042 117339319 -49310977 - L1_Mus3 LINE L1 -14 6624 6348 4 1480 761 103 0 0 chrX 117339319 117339426 -49310870 + L1_Mus3 LINE L1 6270 6376 -262 4 1480 3298 141 42 29 chrX 117339426 117340017 -49310279 - Lx3A LINE L1 0 6981 6383 4 1480 2024 154 52 6 chrX 117340017 117340363 -49309933 + Lx3_Mus LINE L1 6047 6408 -601 4 1480 281 231 27 36 chrX 117340361 117340473 -49309823 + L1_Mur2 LINE L1 789 899 -5813 4 1480 688 274 9 69 chrX 117340620 117340836 -49309460 - ORR1C2 LTR MaLR -8 376 174 4 1480 241 174 29 0 chrX 117340837 117340906 -49309390 + GA-rich Low_complexity Low_complexity 2 72 0 4 1480 1287 248 88 12 chrX 117340979 117341318 -49308978 + ORR1D1 LTR MaLR 1 365 -9 4 1480 2721 244 35 14 chrX 117341338 117341986 -49308310 + MERVL_2A-int LTR ERVL 4637 5298 -463 4 1480 453 269 100 8 chrX 117341987 117342107 -49308189 + MT2A LTR ERVL 77 207 -326 4 1480 183 42 0 0 chrX 117342522 117342546 -49307750 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1480 21 57 0 0 chrX 117342572 117342607 -49307689 + AT_rich Low_complexity Low_complexity 1 35 0 4 1480 1178 103 5 5 chrX 117342628 117342813 -49307483 + L1_Mus4 LINE L1 6445 6629 -7 4 1480 21 36 0 0 chrX 117342850 117342878 -49307418 + AT_rich Low_complexity Low_complexity 1 28 0 4 1480 10917 148 58 75 chrX 117343429 117344679 -49305617 + Lx4A LINE L1 3549 4842 -1035 4 1480 1095 83 0 7 chrX 117344679 117344825 -49305471 + B1_Mm SINE Alu 3 147 0 4 1480 10917 163 43 56 chrX 117344825 117347134 -49303162 + Lx4A LINE L1 4843 7054 -4 4 1480 195 114 0 0 chrX 117347986 117348021 -49302275 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 4 1480 7451 170 36 8 chrX 117348030 117349412 -49300884 - Lx3C LINE L1 0 6976 5557 4 1480 4015 216 39 36 chrX 117351014 117352116 -49298180 + Lx7 LINE L1 4802 5912 -1784 4 1480 445 202 0 0 chrX 117352110 117352189 -49298107 + L1VL1 LINE L1 23 101 -6321 4 1480 4639 79 3 6 chrX 117352186 117352820 -49297476 + L1Md_F2 LINE L1 4954 5585 -298 4 1480 7571 72 0 5 chrX 117352821 117353808 -49296488 + L1Md_F2 LINE L1 5587 6568 -14 4 1480 488 241 9 0 chrX 117353817 117353929 -49296367 + Lx7 LINE L1 5896 6008 -1688 4 1480 480 242 0 0 chrX 117353951 117354063 -49296233 - Lx6 LINE L1 -932 6764 6642 4 1480 4481 242 53 20 chrX 117354086 117355260 -49295036 + Lx7 LINE L1 6049 7261 -435 4 1480 216 0 0 0 chrX 117355261 117355285 -49295011 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 4 1480 947 238 3 24 chrX 117355327 117355615 -49294681 - L1_Mur2 LINE L1 -5911 801 520 4 1480 4478 187 51 2 chrX 117355876 117356224 -49294072 + Lx4B LINE L1 4956 5339 -538 4 1480 666 188 7 7 chrX 117356224 117356369 -49293927 + Lx2B LINE L1 6856 7000 0 4 1480 7230 200 40 9 chrX 117356369 117358047 -49292249 + Lx4B LINE L1 5340 7058 0 4 1480 264 307 112 50 chrX 117358165 117358326 -49291970 + RMER4A LTR ERVK 252 422 -44 4 1480 2414 221 47 81 chrX 117358332 117358631 -49291665 + MYSERV6-int LTR ERVK 7813 7968 -991 4 1480 189 0 0 0 chrX 117358631 117358652 -49291644 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 1480 2414 217 60 69 chrX 117358652 117359325 -49290971 + MYSERV6-int LTR ERVK 7969 8620 -339 4 1480 664 163 0 0 chrX 117359343 117359468 -49290828 - L1_Mus4 LINE L1 -991 5645 5523 4 1480 324 0 0 0 chrX 117359544 117359580 -49290716 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1480 2629 151 34 24 chrX 117359585 117360249 -49290047 + L1VL4 LINE L1 443 1086 -2529 4 1480 1079 80 0 0 chrX 117360249 117360386 -49289910 + B1_Mus2 SINE Alu 1 137 -10 4 1480 515 16 0 15 chrX 117360386 117360451 -49289845 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 4 1480 1519 139 37 43 chrX 117360451 117360576 -49289720 + L1VL4 LINE L1 1087 1200 -2415 4 1480 202 154 0 25 chrX 117361538 117361578 -49288718 + T-rich Low_complexity Low_complexity 2 40 0 4 1480 33415 85 3 10 chrX 117362571 117368583 -49281713 - L1Md_F2 LINE L1 -2 6580 224 4 1480 189 121 0 0 chrX 117368589 117368622 -49281674 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 4 1480 693 104 130 0 chrX 117369401 117369438 -49280858 + RMER4B LTR ERVK 20 71 -514 4 1480 180 0 0 0 chrX 117369438 117369458 -49280838 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 4 1480 693 111 130 2 chrX 117369458 117369548 -49280748 + RMER4B LTR ERVK 71 160 -306 4 1480 1009 118 6 6 chrX 117369549 117369711 -49280585 - L1_Mur2 LINE L1 -1078 4799 4638 4 1480 1001 134 38 0 chrX 117369708 117369894 -49280402 - L1_Mur2 LINE L1 -5875 1211 1019 4 1480 21 0 0 0 chrX 117369920 117369941 -49280355 + AT_rich Low_complexity Low_complexity 1 21 0 5 1480 296 309 36 0 chrX 117370020 117370104 -49280192 + B3A SINE B2 3 89 -109 5 1480 270 0 0 0 chrX 117370595 117370625 -49279671 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1480 384 196 0 21 chrX 117370625 117370719 -49279577 - Lx3A LINE L1 -14 6967 6876 5 1480 279 0 0 0 chrX 117370746 117370777 -49279519 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 5 1480 297 119 0 0 chrX 117371353 117371395 -49278901 + RMER6D LTR ERVK 1 42 -678 5 1480 374 138 0 0 chrX 117371401 117371459 -49278837 - RMER6D LTR ERVK -662 58 1 5 1480 2272 207 100 18 chrX 117371460 117372010 -49278286 - RMER6-int LTR ERVK -2 3175 2581 5 1480 247 291 0 0 chrX 117372015 117372070 -49278226 - LSU-rRNA_Hsa rRNA rRNA -3200 1835 1781 5 1480 563 229 0 0 chrX 117372090 117372199 -49278097 - RMER6D LTR ERVK 0 720 612 5 1480 307 83 0 0 chrX 117372203 117372251 -49278045 - Lx2 LINE L1 -12 6985 6938 5 1480 4167 78 17 3 chrX 117372911 117373487 -49276809 - L1_Mus2 LINE L1 -1 6565 5982 5 1480 1377 33 0 11 chrX 117373486 117373668 -49276628 + L1Md_F2 LINE L1 6385 6564 -18 5 1480 482 103 13 0 chrX 117373668 117373746 -49276550 + (TA)n Simple_repeat Simple_repeat 1 79 0 5 1480 806 112 1 1 chrX 117373746 117373880 -49276416 - L1_Mus2 LINE L1 -640 5996 5863 5 1480 509 250 158 20 chrX 117373856 117374052 -49276244 + L1Md_F LINE L1 407 629 -5890 5 1480 24 53 0 0 chrX 117374141 117374179 -49276117 + AT_rich Low_complexity Low_complexity 1 38 0 5 1480 3455 44 7 2 chrX 117375196 117375630 -49274666 + L1Md_F3 LINE L1 6148 6583 -1 5 1480 27 0 0 0 chrX 117375640 117375667 -49274629 + AT_rich Low_complexity Low_complexity 1 27 0 5 1480 449 302 144 0 chrX 117375881 117376020 -49274276 + B3A SINE B2 7 165 -33 5 1480 198 191 0 0 chrX 117376066 117376108 -49274188 + (TATATG)n Simple_repeat Simple_repeat 3 44 0 5 1480 277 125 0 35 chrX 117376118 117376176 -49274120 + GA-rich Low_complexity Low_complexity 1 56 0 5 1480 400 358 193 4 chrX 117377097 117377366 -49272930 - MLT1E2 LTR MaLR -90 537 218 5 1480 180 0 0 0 chrX 117377601 117377621 -49272675 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 5 1480 920 180 0 16 chrX 117378757 117378949 -49271347 - Lx2 LINE L1 0 6997 6809 5 1480 3426 35 0 0 chrX 117379152 117379548 -49270748 - MTA_Mm LTR MaLR 0 396 1 5 1480 9264 21 2 20 chrX 117379548 117380276 -49270020 - MTA_Mm-int LTR MaLR 0 1098 391 5 1480 1667 31 0 0 chrX 117380276 117380469 -49269827 - B2_Mm1t SINE B2 0 193 1 5 1480 9264 21 2 20 chrX 117380469 117380858 -49269438 - MTA_Mm-int LTR MaLR -708 390 1 5 1480 3422 33 0 0 chrX 117380858 117381254 -49269042 - MTA_Mm LTR MaLR 0 396 1 5 1480 633 38 0 0 chrX 117381585 117381665 -49268631 + (CA)n Simple_repeat Simple_repeat 1 80 0 5 1480 21 57 0 0 chrX 117381977 117382012 -49268284 + AT_rich Low_complexity Low_complexity 1 35 0 5 1480 202 234 0 0 chrX 117383301 117383348 -49266948 + T-rich Low_complexity Low_complexity 2 48 0 5 1480 2149 291 17 79 chrX 117383349 117383923 -49266373 - Lx9 LINE L1 -175 7469 6933 5 1480 1612 131 83 4 chrX 117383923 117384200 -49266096 - Lx2A1 LINE L1 -8 7000 6702 5 1480 2149 291 17 79 chrX 117384200 117384570 -49265726 - Lx9 LINE L1 -712 6932 6584 5 1480 21 36 0 0 chrX 117384654 117384682 -49265614 + AT_rich Low_complexity Low_complexity 1 28 0 5 1480 457 297 36 0 chrX 117384762 117384873 -49265423 + PB1D9 SINE Alu 6 120 0 5 1480 23 0 0 0 chrX 117384898 117384921 -49265375 + AT_rich Low_complexity Low_complexity 1 23 0 5 1480 360 394 0 56 chrX 117385711 117385891 -49264405 + MamSINE1 SINE tRNA 2 171 -119 5 1480 222 171 0 0 chrX 117385943 117385984 -49264312 + GA-rich Low_complexity Low_complexity 3 43 0 5 1480 5466 64 17 0 chrX 117386489 117387194 -49263102 + L1_Mus1 LINE L1 5850 6566 -1 5 1480 555 351 7 33 chrX 117387753 117388027 -49262269 + Lx8 LINE L1 6429 6695 -778 5 1480 23 68 0 0 chrX 117388108 117388152 -49262144 + AT_rich Low_complexity Low_complexity 1 44 0 5 1480 722 359 78 6 chrX 117388471 117388830 -49261466 + Lx8 LINE L1 6716 7100 -373 5 1480 2500 219 9 56 chrX 117388953 117389523 -49260773 + RMER15 LTR ERVL 30 572 -3 5 1480 3226 56 2 10 chrX 117389657 117390056 -49260240 + MTA_Mm LTR MaLR 1 396 0 5 1480 22 0 0 0 chrX 117390140 117390162 -49260134 + AT_rich Low_complexity Low_complexity 1 22 0 5 1480 379 286 63 21 chrX 117390391 117390534 -49259762 - Arthur1B DNA Tip100 -163 1062 914 5 1480 345 330 0 0 chrX 117390634 117390725 -49259571 - MTE2b LTR MaLR -222 157 67 5 1480 993 99 0 13 chrX 117390874 117391028 -49259268 + L1Md_F2 LINE L1 6419 6570 -12 5 1480 2203 139 44 23 chrX 117391050 117391434 -49258862 + Lx LINE L1 6257 6648 -6 5 1480 316 160 87 39 chrX 117391608 117391712 -49258584 + MER44A DNA MER2_type 87 195 -144 5 1480 406 181 128 0 chrX 117391866 117391960 -49258336 + RLTR28B LTR ERVL 1 106 -375 5 1480 227 378 13 63 chrX 117391971 117392208 -49258088 - RMER2 LTR ERV1 -43 524 300 5 1480 2066 194 20 12 chrX 117392440 117392842 -49257454 + RLTR28 LTR ERVL 104 508 -16 5 1480 230 222 0 0 chrX 117393554 117393599 -49256697 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1480 425 34 17 0 chrX 117393798 117393857 -49256439 + (TTG)n Simple_repeat Simple_repeat 2 61 0 5 1480 1123 70 0 0 chrX 117393857 117394000 -49256296 - B1_Mm SINE Alu -2 145 3 5 1480 25 83 0 0 chrX 117394008 117394068 -49256228 + AT_rich Low_complexity Low_complexity 1 60 0 5 1480 21 57 0 0 chrX 117394143 117394178 -49256118 + AT_rich Low_complexity Low_complexity 1 35 0 5 1480 315 376 38 6 chrX 117394178 117394336 -49255960 - MIRb SINE MIR -34 234 72 5 1480 3272 82 2 5 chrX 117395615 117396058 -49254238 + L1Md_F2 LINE L1 6139 6580 -2 5 1480 771 303 110 53 chrX 117396831 117397187 -49253109 + MTEa LTR MaLR 1 376 -3 5 1480 209 57 29 0 chrX 117397987 117398022 -49252274 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 5 1480 306 0 0 0 chrX 117398022 117398056 -49252240 + (TGG)n Simple_repeat Simple_repeat 3 36 0 5 1480 407 19 19 0 chrX 117398058 117398110 -49252186 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1480 450 0 0 0 chrX 117398112 117398162 -49252134 + (GA)n Simple_repeat Simple_repeat 2 51 0 5 1480 28 48 0 0 chrX 117398246 117398288 -49252008 + AT_rich Low_complexity Low_complexity 1 42 0 5 1480 324 0 0 0 chrX 117398312 117398348 -49251948 + (TTA)n Simple_repeat Simple_repeat 1 36 0 5 1480 771 11 0 0 chrX 117398674 117398762 -49251534 + (GA)n Simple_repeat Simple_repeat 1 88 0 5 1480 275 0 0 28 chrX 117398911 117398947 -49251349 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 5 1480 227 276 133 54 chrX 117399828 117400031 -49250265 - Charlie5 DNA MER1_type -39 2585 2367 5 1480 253 296 0 36 chrX 117403819 117403903 -49246393 + C-rich Low_complexity Low_complexity 3 83 0 5 1480 260 279 0 0 chrX 117405703 117405782 -49244514 + A-rich Low_complexity Low_complexity 1 79 0 5 1480 267 190 0 0 chrX 117406068 117406126 -49244170 + A-rich Low_complexity Low_complexity 1 58 0 5 1480 465 122 0 0 chrX 117406853 117406927 -49243369 + (TG)n Simple_repeat Simple_repeat 2 75 0 5 1480 198 0 0 0 chrX 117407394 117407416 -49242880 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 5 1480 214 143 0 45 chrX 117408155 117408199 -49242097 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 5 1480 23 0 0 0 chrX 117408846 117408869 -49241427 + AT_rich Low_complexity Low_complexity 1 23 0 5 1480 369 0 0 0 chrX 117409444 117409485 -49240811 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1480 195 42 0 0 chrX 117409548 117409572 -49240724 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 5 1480 858 109 0 0 chrX 117410022 117410150 -49240146 + (TA)n Simple_repeat Simple_repeat 2 129 0 5 1480 180 0 0 0 chrX 117410655 117410675 -49239621 + (TTTAG)n Simple_repeat Simple_repeat 3 22 0 5 1480 25 31 0 0 chrX 117411036 117411068 -49239228 + AT_rich Low_complexity Low_complexity 1 32 0 5 1480 313 299 60 13 chrX 117412018 117412182 -49238114 + MIR3 SINE MIR 10 180 -28 5 1480 26 30 0 0 chrX 117412871 117412904 -49237392 + AT_rich Low_complexity Low_complexity 1 33 0 5 1480 396 0 0 0 chrX 117413538 117413582 -49236714 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1480 28 48 0 0 chrX 117413621 117413663 -49236633 + AT_rich Low_complexity Low_complexity 1 42 0 5 1480 582 260 0 0 chrX 117414125 117414252 -49236044 - MER5A1 DNA MER1_type -2 164 38 5 1480 402 344 25 13 chrX 117414719 117414878 -49235418 - RSINE1 SINE B4 0 165 5 5 1480 22 56 0 0 chrX 117414953 117414989 -49235307 + AT_rich Low_complexity Low_complexity 1 36 0 5 1480 358 15 59 29 chrX 117415036 117415104 -49235192 + (TTTTTG)n Simple_repeat Simple_repeat 3 72 0 5 1480 323 213 53 0 chrX 117415713 117415807 -49234489 - MER44D DNA MER2_type -118 587 490 5 1480 318 314 82 8 chrX 117415779 117415901 -49234395 - MER44D DNA MER2_type -573 132 2 5 1480 351 0 0 0 chrX 117415988 117416027 -49234269 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1480 1079 98 6 0 chrX 117417549 117417712 -49232584 + (TTCTC)n Simple_repeat Simple_repeat 4 167 0 5 1480 305 143 53 67 chrX 117418510 117418585 -49231711 - HAL1-3A_ME LINE L1 -810 2048 1975 5 1480 201 74 0 0 chrX 117418585 117418612 -49231684 + (TATG)n Simple_repeat Simple_repeat 2 28 0 5 1480 40 37 0 0 chrX 117419211 117419265 -49231031 + AT_rich Low_complexity Low_complexity 1 54 0 5 1480 22 35 0 0 chrX 117419691 117419720 -49230576 + AT_rich Low_complexity Low_complexity 1 29 0 5 1480 590 227 0 0 chrX 117420032 117420142 -49230154 - B3 SINE B2 -105 111 2 5 1480 637 237 53 0 chrX 117420389 117420541 -49229755 - Lx6 LINE L1 -2 7458 7299 5 1480 521 312 78 0 chrX 117420985 117421139 -49229157 + B3A SINE B2 3 168 -30 5 1480 320 43 22 0 chrX 117421141 117421187 -49229109 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1480 279 0 0 0 chrX 117421187 117421217 -49229079 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 1480 461 335 37 16 chrX 117422395 117422583 -49227713 + B3A SINE B2 3 194 -4 5 1480 22 35 0 0 chrX 117424124 117424153 -49226143 + AT_rich Low_complexity Low_complexity 1 29 0 5 1480 1331 99 0 66 chrX 117424819 117425045 -49225251 - L1_Mus1 LINE L1 -366 5517 5307 6 1480 7618 65 5 3 chrX 117425062 117426086 -49224210 + L1_Mus1 LINE L1 5533 6566 -1 6 1480 2778 262 18 19 chrX 117427236 117427918 -49222378 - Lx5 LINE L1 0 7460 6780 6 1480 386 250 75 100 chrX 117427921 117427945 -49222351 + B4 SINE B4 66 220 -71 6 1480 857 133 15 0 chrX 117427945 117428080 -49222216 + B1_Mus1 SINE Alu 6 142 -6 6 1480 486 0 0 0 chrX 117428081 117428135 -49222161 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 6 1480 379 209 0 0 chrX 117428176 117428243 -49222053 - Lx5 LINE L1 -726 6734 6668 6 1480 1769 202 30 17 chrX 117428252 117428465 -49221831 + ORR1B2 LTR MaLR 1 216 -151 6 1480 3049 20 0 0 chrX 117428465 117428811 -49221485 + ORR1A0 LTR MaLR 1 346 0 6 1480 1769 202 30 17 chrX 117428811 117428959 -49221337 + ORR1B2 LTR MaLR 217 367 0 6 1480 5611 197 69 16 chrX 117428959 117430234 -49220062 + ORR1B2-int LTR MaLR 1 1343 -166 6 1480 3512 165 18 6 chrX 117430241 117430912 -49219384 + L1_Mur1 LINE L1 3518 4196 -1690 6 1480 3488 153 99 2 chrX 117430928 117431561 -49218735 + Lx2B LINE L1 6306 7000 0 6 1480 427 319 98 37 chrX 117431685 117431864 -49218432 - Charlie10 DNA MER1_type -167 2655 2475 6 1480 2567 197 153 8 chrX 117431864 117432467 -49217829 - RMER6C LTR ERVK 0 690 1 6 1480 427 319 98 37 chrX 117432467 117432859 -49217437 - Charlie10 DNA MER1_type -348 2474 2049 6 1480 323 375 80 46 chrX 117433121 117433510 -49216786 + MER92A LTR ERV1 9 410 -2 6 1480 385 272 50 12 chrX 117433511 117433671 -49216625 - Charlie10 DNA MER1_type -969 1853 1688 6 1480 14408 83 7 18 chrX 117433698 117436442 -49213854 - L1Md_F2 LINE L1 -1 6581 3870 6 1480 839 109 22 0 chrX 117436431 117436568 -49213728 + L1_Mm LINE L1 1363 1502 -4381 6 1480 2902 219 52 14 chrX 117436565 117437453 -49212843 - Lx5 LINE L1 -784 6266 5349 6 1480 8744 47 17 1 chrX 117437442 117439264 -49211032 - L1Md_F2 LINE L1 -9 6573 4734 6 2 8607 186 211 4 chrX 117439262 117441440 -49208856 - Lx5 LINE L1 -544 5333 2705 6 1481 859 135 98 27 chrX 117441468 117441651 -49208645 + Lx LINE L1 6459 6654 0 6 1481 29 0 0 0 chrX 117441821 117441850 -49208446 + AT_rich Low_complexity Low_complexity 1 29 0 6 1481 1001 274 125 15 chrX 117442236 117442573 -49207723 - ORR1D1 LTR MaLR 0 374 1 6 1481 1110 69 0 33 chrX 117442952 117443102 -49207194 + B1_Mus2 SINE Alu 1 145 -2 6 1481 615 27 0 0 chrX 117443102 117443175 -49207121 + (TA)n Simple_repeat Simple_repeat 1 73 0 6 1481 243 0 0 0 chrX 117443175 117443201 -49207095 + (GA)n Simple_repeat Simple_repeat 2 28 0 6 1481 318 50 0 0 chrX 117443373 117443413 -49206883 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 1481 297 0 0 0 chrX 117443413 117443445 -49206851 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1481 462 91 0 0 chrX 117443730 117443807 -49206489 - L1Md_F2 LINE L1 -2 6580 6504 6 1481 701 122 0 9 chrX 117444102 117444218 -49206078 + (TTCC)n Simple_repeat Simple_repeat 3 117 0 6 1481 2317 41 0 20 chrX 117444776 117445076 -49205220 - L1Md_F3 LINE L1 -2 6582 6289 6 1481 28 0 0 0 chrX 117445286 117445314 -49204982 + AT_rich Low_complexity Low_complexity 1 28 0 6 1481 24 32 0 0 chrX 117445844 117445875 -49204421 + AT_rich Low_complexity Low_complexity 1 31 0 6 1481 605 319 61 23 chrX 117446197 117446460 -49203836 + B4A SINE B4 2 274 -18 6 1481 27 0 0 0 chrX 117446635 117446662 -49203634 + AT_rich Low_complexity Low_complexity 1 27 0 6 1481 339 78 0 0 chrX 117446728 117446779 -49203517 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 6 1481 279 306 42 0 chrX 117447105 117447177 -49203119 + B3A SINE B2 45 119 -79 6 1481 3188 53 5 0 chrX 117447179 117447573 -49202723 - MTA_Mm LTR MaLR 0 396 1 6 1481 7234 88 10 69 chrX 117447573 117448740 -49201556 - MTA_Mm-int LTR MaLR 0 1098 1 6 1481 377 60 0 0 chrX 117448740 117448790 -49201506 - MTA_Mm LTR MaLR 0 400 351 6 1481 1021 70 38 6 chrX 117448783 117448941 -49201355 - MTA_Mm-int LTR MaLR -843 255 93 6 1481 738 95 0 0 chrX 117449871 117449976 -49200320 - MTA_Mm-int LTR MaLR -993 105 1 6 1481 3079 51 13 5 chrX 117449976 117450369 -49199927 - MTA_Mm LTR MaLR 0 396 1 6 1481 247 368 35 0 chrX 117450369 117450456 -49199840 + B3 SINE B2 115 204 -12 6 1481 349 254 14 0 chrX 117450473 117450544 -49199752 + B3A SINE B2 83 154 -44 6 1481 22 0 0 0 chrX 117450547 117450569 -49199727 + AT_rich Low_complexity Low_complexity 1 22 0 6 1481 201 74 0 0 chrX 117450850 117450877 -49199419 + (TAA)n Simple_repeat Simple_repeat 2 28 0 6 1481 420 149 0 0 chrX 117451177 117451271 -49199025 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 6 1481 357 361 8 8 chrX 117451305 117451439 -49198857 - RSINE1 SINE B4 -29 136 3 6 1481 6848 74 22 20 chrX 117452571 117453519 -49196777 - L1Md_F2 LINE L1 -3 6579 5630 6 1481 392 214 242 25 chrX 117453544 117453664 -49196632 + B1_Mus1 SINE Alu 1 146 -2 6 1481 214 127 35 35 chrX 117453668 117453725 -49196571 + (CAAA)n Simple_repeat Simple_repeat 3 59 0 6 1481 624 59 0 0 chrX 117453746 117453831 -49196465 + (GAAA)n Simple_repeat Simple_repeat 2 86 0 6 1481 1218 97 0 0 chrX 117453852 117454027 -49196269 + (GAGAA)n Simple_repeat Simple_repeat 1 175 0 6 1481 357 355 0 0 chrX 117454824 117454931 -49195365 - PB1D10 SINE Alu -8 109 3 6 1481 489 84 0 0 chrX 117455499 117455570 -49194726 + (TG)n Simple_repeat Simple_repeat 2 72 0 6 1481 27 73 0 0 chrX 117456216 117456271 -49194025 + AT_rich Low_complexity Low_complexity 1 55 0 6 1481 638 176 0 25 chrX 117456630 117456752 -49193544 - RMER3D-int LTR ERVK -1309 1533 1415 6 1481 22 56 0 0 chrX 117456832 117456868 -49193428 + AT_rich Low_complexity Low_complexity 1 36 0 6 1481 360 261 25 42 chrX 117456964 117457084 -49193212 + B1_Mur1 SINE Alu 23 140 -9 6 1481 645 228 127 6 chrX 117457138 117457319 -49192977 + B3 SINE B2 3 205 -11 6 1481 1115 45 25 15 chrX 117457371 117457575 -49192721 + (TC)n Simple_repeat Simple_repeat 1 205 0 6 1481 1079 67 0 0 chrX 117457599 117457733 -49192563 - B1_Mus2 SINE Alu -13 134 1 6 1481 23 68 0 0 chrX 117459277 117459321 -49190975 + AT_rich Low_complexity Low_complexity 1 44 0 6 1481 2562 116 34 5 chrX 117459364 117459773 -49190523 - Lx3_Mus LINE L1 -7 7002 6582 6 1481 386 321 96 49 chrX 117460360 117460684 -49189612 - Lx8 LINE L1 -6 7467 7129 6 1481 336 322 91 0 chrX 117460756 117460899 -49189397 - Lx8 LINE L1 -463 7010 6855 6 1481 364 215 0 0 chrX 117461227 117461306 -49188990 - Lx7 LINE L1 -24 7672 7594 6 1481 442 324 21 35 chrX 117461391 117461532 -49188764 + B1F1 SINE Alu 3 141 -8 6 1481 1666 132 34 20 chrX 117461729 117462023 -49188273 - Lx3C LINE L1 -759 6217 5920 6 1481 4735 117 30 0 chrX 117462023 117462747 -49187549 + Lx3C LINE L1 6231 6976 0 6 1481 24 67 0 0 chrX 117462755 117462800 -49187496 + AT_rich Low_complexity Low_complexity 1 45 0 6 1481 230 204 0 0 chrX 117463299 117463343 -49186953 + MER3 DNA MER1_type 6 49 -160 6 1481 680 206 0 0 chrX 117463348 117463474 -49186822 + B3 SINE B2 5 130 -86 6 1481 28 0 0 0 chrX 117463662 117463690 -49186606 + AT_rich Low_complexity Low_complexity 1 28 0 6 1481 39420 29 2 6 chrX 117464405 117470625 -49179671 - L1Md_T LINE L1 0 6582 395 6 1481 32 43 0 0 chrX 117470738 117470784 -49179512 + AT_rich Low_complexity Low_complexity 1 46 0 6 1481 3923 35 35 0 chrX 117471404 117471941 -49178355 - L1Md_F3 LINE L1 0 6584 6066 6 1481 444 19 0 0 chrX 117471941 117471993 -49178303 + L1Md_F3 LINE L1 5827 5878 -706 6 1481 21 0 0 0 chrX 117472053 117472074 -49178222 + AT_rich Low_complexity Low_complexity 1 21 0 6 1481 28 91 0 0 chrX 117472153 117472230 -49178066 + AT_rich Low_complexity Low_complexity 1 77 0 6 1481 256 280 41 51 chrX 117473572 117473670 -49176626 + L2a LINE L2 3320 3416 -10 6 1481 21 0 0 0 chrX 117473749 117473770 -49176526 + AT_rich Low_complexity Low_complexity 1 21 0 6 1481 256 0 24 49 chrX 117473896 117473937 -49176359 + (TTTTTG)n Simple_repeat Simple_repeat 1 40 0 6 1481 1106 88 0 0 chrX 117473937 117474084 -49176212 - B1_Mus1 SINE Alu 0 148 2 6 1481 24 0 0 0 chrX 117474864 117474888 -49175408 + AT_rich Low_complexity Low_complexity 1 24 0 6 1481 497 339 22 33 chrX 117475519 117475702 -49174594 + B3A SINE B2 2 182 -16 6 1481 626 256 104 5 chrX 117475820 117476012 -49174284 - B3 SINE B2 -5 211 1 6 1481 2864 284 69 22 chrX 117476025 117477211 -49173085 - Lx6 LINE L1 -177 7283 6004 6 1481 23 0 0 0 chrX 117477436 117477459 -49172837 + AT_rich Low_complexity Low_complexity 1 23 0 6 1481 203 171 0 0 chrX 117477600 117477635 -49172661 + (CAA)n Simple_repeat Simple_repeat 2 36 0 6 1481 29 0 0 0 chrX 117477696 117477725 -49172571 + AT_rich Low_complexity Low_complexity 1 29 0 6 1481 24 32 0 0 chrX 117478253 117478284 -49172012 + AT_rich Low_complexity Low_complexity 1 31 0 6 1481 224 323 0 0 chrX 117478330 117478392 -49171904 + CT-rich Low_complexity Low_complexity 1 62 0 6 1481 372 22 0 0 chrX 117480071 117480116 -49170180 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1481 1151 75 0 0 chrX 117481358 117481505 -49168791 + B1_Mus1 SINE Alu 2 148 0 6 1481 309 117 0 0 chrX 117481505 117481565 -49168731 + (A)n Simple_repeat Simple_repeat 1 60 0 6 1481 31 44 0 0 chrX 117482443 117482488 -49167808 + AT_rich Low_complexity Low_complexity 1 45 0 6 1481 447 213 43 0 chrX 117482516 117482610 -49167686 + Lx4B LINE L1 6595 6692 -366 6 1481 207 157 56 11 chrX 117482838 117482928 -49167368 + (TA)n Simple_repeat Simple_repeat 1 94 0 6 1481 21 0 0 0 chrX 117482928 117482949 -49167347 + AT_rich Low_complexity Low_complexity 1 21 0 6 1481 1102 110 0 0 chrX 117482961 117483107 -49167189 - B1_Mus1 SINE Alu -2 146 1 6 1481 26 50 0 0 chrX 117483311 117483351 -49166945 + AT_rich Low_complexity Low_complexity 1 40 0 6 1481 1002 135 0 0 chrX 117483351 117483499 -49166797 - B1_Mus1 SINE Alu 0 148 1 6 1481 33 0 0 0 chrX 117484492 117484525 -49165771 + AT_rich Low_complexity Low_complexity 1 33 0 6 1481 713 161 1 20 chrX 117484676 117484820 -49165476 - Lx4B LINE L1 -243 6757 6619 6 1481 4083 173 40 4 chrX 117485376 117486155 -49164141 - Lx4B LINE L1 -451 6607 5801 6 1481 4587 161 52 10 chrX 117486277 117487142 -49163154 - Lx2B LINE L1 -2 6998 6098 6 1481 1930 163 0 18 chrX 117490061 117490404 -49159892 + Lx LINE L1 6312 6648 -6 6 1481 21 36 0 0 chrX 117490422 117490450 -49159846 + AT_rich Low_complexity Low_complexity 1 28 0 6 1481 8095 109 8 40 chrX 117490457 117491768 -49158528 - Lx3A LINE L1 0 6981 5713 6 1481 1409 272 30 35 chrX 117491952 117492355 -49157941 + MTD LTR MaLR 1 401 -18 6 1481 3872 79 2 15 chrX 117492471 117493001 -49157295 - L1Md_F2 LINE L1 -3 6579 6057 6 1481 454 79 16 0 chrX 117493001 117493064 -49157232 + L1Md_F2 LINE L1 6032 6095 -489 6 1481 438 229 115 125 chrX 117494098 117494298 -49155998 - URR1B DNA MER1_type -1 224 27 6 1481 433 216 48 158 chrX 117495062 117495227 -49155069 - RMER17D2 LTR ERVK 0 809 663 7 1481 7790 97 3 0 chrX 117495252 117496799 -49153497 - L1_Mus2 LINE L1 -298 6268 4715 7 1481 2446 153 0 139 chrX 117496799 117497322 -49152974 - L1_Mus2 LINE L1 -5353 1304 852 7 1481 3118 68 2 5 chrX 117497322 117497719 -49152577 - MTA_Mm LTR MaLR 0 396 1 7 1481 2446 228 14 163 chrX 117497719 117498330 -49151966 - L1_Mus2 LINE L1 -5783 851 349 7 1481 2846 138 4 15 chrX 117498330 117498800 -49151496 - Lx3A LINE L1 -6 6975 6511 7 1481 1971 244 17 173 chrX 117498800 117498819 -49151477 - L1_Mus2 LINE L1 -6286 348 330 7 1481 7670 15 0 0 chrX 117499117 117500000 -49150296 + L1Md_Gf LINE L1 1 883 -5639 7 1481 35325 39 1 0 chrX 117500000 117504606 -49145690 + L1Md_T LINE L1 884 5589 -297 1 1481 8888 6 0 0 chrX 117504606 117505602 -49144694 + L1Md_T LINE L1 5590 6585 0 1 1481 22 56 0 0 chrX 117506901 117506937 -49143359 + AT_rich Low_complexity Low_complexity 1 36 0 2 1481 288 305 35 71 chrX 117507016 117507129 -49143167 + PB1D10 SINE Alu 9 117 0 3 1481 5318 167 58 6 chrX 117507309 117508301 -49141995 - Lx4A LINE L1 -1 7057 6014 4 1481 389 313 17 34 chrX 117508529 117508648 -49141648 + RSINE1 SINE B4 12 128 -37 5 1481 6802 127 45 2 chrX 117509081 117510180 -49140116 - Lx2 LINE L1 0 6997 5851 6 1481 344 259 0 0 chrX 117510180 117510261 -49140035 + L1VL4 LINE L1 411 491 -5811 7 1481 281 322 215 7 chrX 117511301 117511445 -49138851 + B3A SINE B2 14 187 -11 8 1481 30 45 0 0 chrX 117511610 117511654 -49138642 + AT_rich Low_complexity Low_complexity 1 44 0 9 1481 333 68 0 0 chrX 117511873 117511917 -49138379 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1481 231 36 0 0 chrX 117515070 117515098 -49135198 + (GAA)n Simple_repeat Simple_repeat 1 28 0 1 1481 687 219 7 7 chrX 117517085 117517232 -49133064 - B1_Mus1 SINE Alu 0 148 2 1 1481 22 35 0 0 chrX 117517756 117517785 -49132511 + AT_rich Low_complexity Low_complexity 1 29 0 1 1481 8407 120 28 9 chrX 117518619 117520560 -49129736 - Lx3B LINE L1 -4 6969 4993 1 1481 240 35 0 0 chrX 117520691 117520720 -49129576 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1 1481 218 300 0 43 chrX 117520739 117520833 -49129463 + CT-rich Low_complexity Low_complexity 3 92 0 1 1481 311 317 110 21 chrX 117520837 117520982 -49129314 - HAL1-3A_ME LINE L1 -419 2439 2282 1 1481 456 312 20 54 chrX 117520985 117521134 -49129162 - B1_Mur4 SINE Alu 0 150 7 1 1481 310 178 11 11 chrX 117521356 117521447 -49128849 + (CATATA)n Simple_repeat Simple_repeat 6 96 0 1 1481 474 61 0 0 chrX 117521451 117521517 -49128779 + (CA)n Simple_repeat Simple_repeat 2 67 0 2 1481 514 319 29 46 chrX 117521534 117521708 -49128588 + B4A SINE B4 116 286 -6 2 1481 22 0 0 0 chrX 117524227 117524249 -49126047 + AT_rich Low_complexity Low_complexity 1 22 0 2 1481 273 151 0 0 chrX 117525299 117525352 -49124944 + T-rich Low_complexity Low_complexity 1 53 0 2 1481 784 107 0 0 chrX 117525352 117525464 -49124832 - B1_Mus1 SINE Alu 0 148 37 2 1481 29 0 0 0 chrX 117525873 117525902 -49124394 + AT_rich Low_complexity Low_complexity 1 29 0 2 1481 420 55 0 0 chrX 117526896 117526951 -49123345 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1481 23 0 0 0 chrX 117528520 117528543 -49121753 + AT_rich Low_complexity Low_complexity 1 23 0 2 1481 783 0 0 0 chrX 117529844 117529931 -49120365 + (TATATG)n Simple_repeat Simple_repeat 2 88 0 2 1481 3893 118 33 11 chrX 117529938 117530575 -49119721 - Lx3A LINE L1 -15 6966 6316 2 1481 2039 71 3 17 chrX 117530575 117530705 -49119591 - Lx3A LINE L1 -944 6037 5910 2 1481 294 50 0 0 chrX 117530705 117530745 -49119551 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 3 1481 2039 71 3 17 chrX 117530745 117530901 -49119395 - Lx3A LINE L1 -1072 5909 5755 2 1481 24 0 0 0 chrX 117531792 117531816 -49118480 + AT_rich Low_complexity Low_complexity 1 24 0 3 1481 1843 75 20 0 chrX 117532181 117532436 -49117860 + L1_Mus1 LINE L1 6302 6561 -6 3 1481 188 86 0 28 chrX 117532442 117532478 -49117818 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 1481 225 338 0 0 chrX 117532501 117532572 -49117724 + ID4_ SINE ID 2 72 -11 3 1481 24 0 0 0 chrX 117532572 117532596 -49117700 + AT_rich Low_complexity Low_complexity 1 24 0 3 1481 235 222 0 0 chrX 117533269 117533332 -49116964 + T-rich Low_complexity Low_complexity 1 63 0 3 1481 210 147 0 0 chrX 117533719 117533753 -49116543 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1481 363 308 70 80 chrX 117533763 117533964 -49116332 + B4A SINE B4 94 292 0 3 1481 476 240 0 0 chrX 117533985 117534081 -49116215 + Lx7 LINE L1 6804 6899 -797 3 1481 2431 111 6 8 chrX 117534081 117534446 -49115850 - RLTR9A LTR ERVK 0 368 5 4 1481 347 167 27 27 chrX 117534458 117534532 -49115764 - ETnERV2-int LTR ERVK -2 7404 7331 4 1481 1318 86 17 0 chrX 117534713 117534888 -49115408 + B2_Mm2 SINE B2 3 180 -15 4 1481 693 167 0 0 chrX 117534890 117535016 -49115280 + GA-rich Low_complexity Low_complexity 2 127 0 4 1481 5310 205 51 75 chrX 117535052 117536788 -49113508 - ETnERV2-int LTR ERVK -985 6421 5174 4 1481 5350 158 37 50 chrX 117536829 117537961 -49112335 - ETnERV2-int LTR ERVK -5215 2191 1075 4 1481 297 118 0 0 chrX 117538022 117538073 -49112223 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 4 1481 307 269 69 66 chrX 117538074 117538377 -49111919 - ETnERV2-int LTR ERVK -2994 320 17 4 1481 2376 104 5 29 chrX 117538393 117538770 -49111526 - RLTR9A LTR ERVK 0 368 1 4 1481 568 273 6 57 chrX 117538770 117538945 -49111351 + Lx7 LINE L1 6894 7059 -637 3 1481 326 282 0 72 chrX 117538953 117539064 -49111232 - ORR1D1 LTR MaLR -249 125 23 4 1481 255 61 0 0 chrX 117539191 117539224 -49111072 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1481 195 129 0 0 chrX 117539224 117539254 -49111042 + (TA)n Simple_repeat Simple_repeat 1 31 0 4 1481 348 324 134 55 chrX 117540430 117540737 -49109559 - MLT1E1A LTR MaLR -261 419 89 4 1481 1063 89 7 0 chrX 117542782 117542928 -49107368 - B1_Mus1 SINE Alu -1 147 1 4 1481 1128 115 33 11 chrX 117543777 117543961 -49106335 - B2_Mm2 SINE B2 -6 189 2 4 1481 6015 135 8 28 chrX 117545396 117546451 -49103845 - Lx3A LINE L1 0 6981 5948 5 1481 919 107 0 97 chrX 117546451 117546627 -49103669 + Lx3_Mus LINE L1 5804 5962 -1047 5 1481 371 38 19 0 chrX 117549228 117549281 -49101015 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 5 1481 210 118 0 0 chrX 117549593 117549627 -49100669 + (T)n Simple_repeat Simple_repeat 1 34 0 5 1481 258 32 0 0 chrX 117549971 117550002 -49100294 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1481 3105 56 5 2 chrX 117550809 117551203 -49099093 - MTA_Mm LTR MaLR 0 396 2 5 1481 297 0 0 0 chrX 117551385 117551418 -49098878 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1481 368 298 11 0 chrX 117551418 117551512 -49098784 - ID_B1 SINE B4 -47 177 83 5 1481 242 276 89 28 chrX 117551965 117552144 -49098152 + L1MEc LINE L1 916 1105 -5295 5 1481 22 0 0 0 chrX 117552363 117552385 -49097911 + AT_rich Low_complexity Low_complexity 1 22 0 5 1481 257 292 18 28 chrX 117552456 117552565 -49097731 + L1MEc LINE L1 1637 1757 -4582 5 1481 3910 45 2 22 chrX 117552597 117553100 -49097196 - L1_Mus1 LINE L1 0 6567 6075 6 1481 5856 94 64 10 chrX 117553125 117554034 -49096262 - Lx3_Mus LINE L1 -2 7007 6050 6 1481 330 236 45 38 chrX 117554052 117554184 -49096112 + L1MEc LINE L1 1730 1862 -4538 5 1481 193 0 94 0 chrX 117554485 117554517 -49095779 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 6 1481 351 324 22 0 chrX 117554725 117554864 -49095432 + L1MC1 LINE L1 6077 6218 -115 6 1481 203 103 26 0 chrX 117554864 117554903 -49095393 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 6 1481 755 290 0 0 chrX 117554916 117555085 -49095211 + MER58B DNA MER1_type 172 340 -1 6 1481 4578 53 0 3 chrX 117556724 117557306 -49092990 - L1Md_F2 LINE L1 0 6582 6003 6 1481 362 248 107 41 chrX 117557418 117557540 -49092756 - RLTR18-int LTR ERVK -512 4849 4720 6 1481 656 211 39 33 chrX 117557543 117557724 -49092572 - MYSERV6-int LTR ERVK -2247 6712 6531 6 1481 354 244 93 0 chrX 117557942 117558028 -49092268 - B1_Mus1 SINE Alu -48 100 7 6 1481 25 0 0 0 chrX 117558951 117558976 -49091320 + AT_rich Low_complexity Low_complexity 1 25 0 7 1481 22 0 0 0 chrX 117559411 117559433 -49090863 + AT_rich Low_complexity Low_complexity 1 22 0 7 1481 21 0 0 0 chrX 117559764 117559785 -49090511 + AT_rich Low_complexity Low_complexity 1 21 0 7 1481 243 324 44 0 chrX 117560090 117560158 -49090138 + MIR3 SINE MIR 111 181 -27 7 1481 343 322 116 19 chrX 117561007 117561317 -49088979 - L1M3 LINE L1 -1097 5043 4704 7 1481 2151 289 54 13 chrX 117561325 117562292 -49088004 + L1M3 LINE L1 3689 4694 -1446 7 1481 697 174 19 6 chrX 117562469 117562625 -49087671 + Lx LINE L1 6496 6653 -1 7 1481 621 116 8 8 chrX 117562758 117562880 -49087416 - L1_Mus4 LINE L1 -2 6634 6513 7 1481 912 109 0 6 chrX 117563051 117563193 -49087103 + L1Md_F2 LINE L1 5476 5615 -2380 7 1481 7520 72 0 7 chrX 117563193 117564187 -49086109 + L1Md_F2 LINE L1 5587 6573 -9 7 1481 21 0 0 0 chrX 117564193 117564214 -49086082 + AT_rich Low_complexity Low_complexity 1 21 0 7 1481 239 215 15 15 chrX 117564215 117564281 -49086015 + L1_Rod LINE L1 2843 2908 -2939 7 1481 662 138 65 0 chrX 117564289 117564412 -49085884 + Lx LINE L1 6522 6652 -2 8 1481 833 222 31 10 chrX 117564599 117564795 -49085501 - Lx LINE L1 -191 6809 6610 8 1481 1937 138 3 16 chrX 117564797 117565106 -49085190 - RLTR10E LTR ERVK -6 305 1 8 1481 1235 202 4 19 chrX 117565122 117565380 -49084916 - Lx4B LINE L1 -497 6561 6308 8 1481 851 148 0 7 chrX 117565381 117565531 -49084765 - Lx LINE L1 -16 6638 6490 8 1481 234 0 0 0 chrX 117565753 117565779 -49084517 + (CA)n Simple_repeat Simple_repeat 1 26 0 8 1481 414 0 0 0 chrX 117566688 117566734 -49083562 + (TTTA)n Simple_repeat Simple_repeat 4 49 0 8 1481 409 217 10 52 chrX 117566741 117566838 -49083458 - RSINE1 SINE B4 -5 160 68 8 1481 48 0 0 0 chrX 117566867 117566915 -49083381 + AT_rich Low_complexity Low_complexity 1 48 0 8 1481 309 311 90 0 chrX 117567689 117567933 -49082363 + L1MA8 LINE L1 5965 6230 -61 8 1481 23 0 0 0 chrX 117567956 117567979 -49082317 + AT_rich Low_complexity Low_complexity 1 23 0 8 1481 222 174 0 0 chrX 117568155 117568201 -49082095 + (CATA)n Simple_repeat Simple_repeat 3 48 0 9 1481 2346 55 0 13 chrX 117568380 117568694 -49081602 + L1Md_F2 LINE L1 6263 6572 -10 9 1481 195 42 0 0 chrX 117569111 117569135 -49081161 + (TTG)n Simple_repeat Simple_repeat 1 24 0 9 1481 703 305 85 32 chrX 117569467 117569820 -49080476 + MTD LTR MaLR 6 380 -39 9 1481 488 97 129 0 chrX 117569957 117570050 -49080246 + L1_Mus4 LINE L1 6524 6628 -8 9 1481 24 32 0 0 chrX 117570758 117570789 -49079507 + AT_rich Low_complexity Low_complexity 1 31 0 9 1481 320 315 204 37 chrX 117571183 117571506 -49078790 + MTE2a LTR MaLR 3 379 0 9 1482 231 319 59 34 chrX 117571760 117571911 -49078385 + L2c LINE L2 3226 3357 -18 9 1482 3164 152 33 4 chrX 117572800 117573342 -49076954 - Lx4A LINE L1 -2 7056 6499 9 1482 3411 89 49 6 chrX 117573472 117573981 -49076315 - L1_Mus4 LINE L1 -7 6629 6099 9 1482 779 86 0 21 chrX 117576234 117576376 -49073920 - L1_Mus4 LINE L1 -1 6635 6497 1 1482 4511 81 0 2 chrX 117576505 117577111 -49073185 - L1_Mm LINE L1 -283 5600 4996 1 1482 801 128 0 15 chrX 117577111 117577246 -49073050 + L1_Mus1 LINE L1 6433 6565 -2 1 1482 29 0 0 0 chrX 117577246 117577275 -49073021 + AT_rich Low_complexity Low_complexity 1 29 0 1 1482 1063 60 0 0 chrX 117577656 117577789 -49072507 + B1_Mus1 SINE Alu 1 133 -15 1 1482 548 266 144 25 chrX 117578114 117578357 -49071939 + RMER5 LTR ERV1 245 516 -18 1 1482 32 43 0 0 chrX 117578450 117578496 -49071800 + AT_rich Low_complexity Low_complexity 1 46 0 1 1482 310 272 21 32 chrX 117578788 117578883 -49071413 + Lx8 LINE L1 7185 7278 -195 1 1482 23 33 0 0 chrX 117580290 117580320 -49069976 + AT_rich Low_complexity Low_complexity 1 30 0 1 1482 189 0 0 0 chrX 117580800 117580821 -49069475 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 1482 378 0 0 0 chrX 117580821 117580862 -49069434 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 1482 540 325 20 0 chrX 117580862 117581062 -49069234 - B3 SINE B2 -9 207 4 1 1482 25 65 0 0 chrX 117581230 117581276 -49069020 + AT_rich Low_complexity Low_complexity 1 46 0 1 1482 1076 286 128 31 chrX 117581373 117581581 -49068715 - Lx9 LINE L1 -175 7469 7260 1 1482 3085 66 0 8 chrX 117581581 117581980 -49068316 - MTA_Mm LTR MaLR 0 396 1 1 1482 1076 286 128 31 chrX 117581980 117582324 -49067972 - Lx9 LINE L1 -385 7259 6863 1 1482 212 393 36 0 chrX 117582558 117582642 -49067654 + B3A SINE B2 3 89 -109 1 1482 1149 198 30 11 chrX 117582959 117583230 -49067066 + Lx3C LINE L1 6693 6968 -8 1 1482 244 224 40 0 chrX 117583496 117583572 -49066724 + (TA)n Simple_repeat Simple_repeat 2 80 0 1 1482 354 67 17 0 chrX 117583702 117583762 -49066534 - Lx LINE L1 0 6654 6594 1 1482 33805 46 19 16 chrX 117583980 117588475 -49061821 + L1Md_Gf LINE L1 261 4911 -975 1 1482 225 183 46 77 chrX 117588475 117588540 -49061756 - RMER20A LTR ERVK -268 248 186 1 1482 33805 46 19 16 chrX 117588540 117589194 -49061102 + L1Md_Gf LINE L1 4912 5589 -297 1 1482 8241 41 0 0 chrX 117589194 117590190 -49060106 + L1Md_T LINE L1 5587 6582 0 1 1482 3832 55 51 2 chrX 117590191 117590702 -49059594 - RLTR13C2 LTR ERVK -272 536 1 1 1482 295 283 36 36 chrX 117590703 117590813 -49059483 - ID_B1 SINE B4 -97 127 18 1 1482 28 0 0 0 chrX 117591351 117591379 -49058917 + AT_rich Low_complexity Low_complexity 1 28 0 1 1482 454 271 28 42 chrX 117591744 117591956 -49058340 - Lx9 LINE L1 -2 7642 7434 1 1482 1146 43 37 0 chrX 117591960 117592122 -49058174 + (TTTTC)n Simple_repeat Simple_repeat 1 168 0 1 1482 561 216 9 0 chrX 117592129 117592240 -49058056 + Lx9 LINE L1 7297 7408 -236 1 1482 22 56 0 0 chrX 117592283 117592319 -49057977 + AT_rich Low_complexity Low_complexity 1 36 0 1 1482 23 33 0 0 chrX 117592771 117592801 -49057495 + AT_rich Low_complexity Low_complexity 1 30 0 1 1482 1067 209 51 142 chrX 117592868 117593220 -49057076 + Lx9 LINE L1 7145 7464 -180 1 1482 983 240 151 108 chrX 117593254 117593632 -49056664 - MT2A LTR ERVL -134 399 6 1 1482 1314 265 16 90 chrX 117593637 117594181 -49056115 - MERVL_2A-int LTR ERVL 0 5761 5258 1 1482 1221 207 55 9 chrX 117594198 117594331 -49055965 - Lx9 LINE L1 0 7644 7505 1 1482 540 45 0 0 chrX 117594331 117594398 -49055898 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 1 1482 1221 207 55 9 chrX 117594398 117594591 -49055705 - Lx9 LINE L1 -140 7504 7303 1 1482 443 262 33 72 chrX 117594592 117594744 -49055552 - MERVL_2A-int LTR ERVL -697 5064 4919 1 1482 785 294 92 5 chrX 117596642 117597012 -49053284 - L1MA9 LINE L1 -74 6238 5837 1 1482 989 235 132 34 chrX 117597168 117597347 -49052949 - ORR1A4 LTR MaLR -5 324 113 1 1482 240 111 0 0 chrX 117597347 117597383 -49052913 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1482 989 235 132 34 chrX 117597383 117597498 -49052798 - ORR1A4 LTR MaLR -217 112 1 1 1482 5208 93 43 1 chrX 117597986 117598779 -49051517 - L1_Mur1 LINE L1 -1451 4435 3610 1 1482 22 88 0 0 chrX 117598990 117599047 -49051249 + AT_rich Low_complexity Low_complexity 1 57 0 1 1482 2235 108 3 17 chrX 117599305 117599662 -49050634 + L1_Mus4 LINE L1 6285 6636 0 1 1482 306 196 0 0 chrX 117599678 117599734 -49050562 + RMER6D LTR ERVK 1 56 -664 1 1482 27 62 0 0 chrX 117601118 117601166 -49049130 + AT_rich Low_complexity Low_complexity 1 48 0 1 1482 405 0 0 0 chrX 117601568 117601613 -49048683 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1482 540 30 0 0 chrX 117601613 117601678 -49048618 + (GA)n Simple_repeat Simple_repeat 1 66 0 1 1482 374 323 102 0 chrX 117601681 117601907 -49048389 + MER58B DNA MER1_type 78 326 -15 1 1482 21 36 0 0 chrX 117602414 117602442 -49047854 + AT_rich Low_complexity Low_complexity 1 28 0 1 1482 27 0 0 0 chrX 117602501 117602528 -49047768 + AT_rich Low_complexity Low_complexity 1 27 0 1 1482 22 35 0 0 chrX 117602561 117602590 -49047706 + AT_rich Low_complexity Low_complexity 1 29 0 1 1482 2637 39 3 3 chrX 117603171 117603509 -49046787 + ORR1A0 LTR MaLR 1 338 -8 1 1482 13775 58 6 1 chrX 117603513 117605295 -49045001 + ORR1A0-int LTR MaLR 1 1792 0 1 1482 2934 32 0 0 chrX 117605295 117605641 -49044655 + ORR1A0 LTR MaLR 1 346 0 1 1482 200 382 54 80 chrX 117606068 117606186 -49044110 + L2 LINE L2 2644 2750 -669 1 1482 2147 117 35 0 chrX 117606186 117606528 -49043768 - Lx LINE L1 0 6654 6301 1 1482 200 382 54 80 chrX 117606528 117606685 -49043611 + L2 LINE L2 2751 2912 -507 1 1482 208 133 70 17 chrX 117607977 117608092 -49042204 + (TTATA)n Simple_repeat Simple_repeat 4 124 0 1 1482 23 78 0 0 chrX 117608117 117608168 -49042128 + AT_rich Low_complexity Low_complexity 1 51 0 1 1482 22 70 0 0 chrX 117608293 117608336 -49041960 + AT_rich Low_complexity Low_complexity 1 43 0 1 1482 21 0 0 0 chrX 117608916 117608937 -49041359 + AT_rich Low_complexity Low_complexity 1 21 0 1 1482 303 146 31 10 chrX 117609516 117609613 -49040683 + (TCTCTG)n Simple_repeat Simple_repeat 6 104 0 1 1482 391 372 38 19 chrX 117610457 117610616 -49039680 + MER63A DNA AcHobo 1 162 -48 1 1482 198 118 0 0 chrX 117611468 117611502 -49038794 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1482 21 57 0 0 chrX 117611577 117611612 -49038684 + AT_rich Low_complexity Low_complexity 1 35 0 1 1482 8002 142 71 5 chrX 117611638 117613246 -49037050 - Lx2 LINE L1 0 6997 5287 1 1482 369 0 53 18 chrX 117613246 117613303 -49036993 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 1 1482 1177 41 0 0 chrX 117613303 117613448 -49036848 - B1_Mus2 SINE Alu -2 145 1 1 1482 4794 196 16 27 chrX 117613448 117613894 -49036402 - Lx2 LINE L1 -591 5286 4852 1 1482 461 215 22 37 chrX 117614604 117614739 -49035557 + Lx5 LINE L1 6915 7047 -3 1 1482 871 252 41 4 chrX 117614888 117615159 -49035137 - Lx9 LINE L1 -35 7609 7329 1 1482 2408 283 2 5 chrX 117615184 117615787 -49034509 - Lx9 LINE L1 -516 7128 6528 1 1482 2835 56 0 0 chrX 117615781 117616137 -49034159 + L1_Mus1 LINE L1 5800 6155 -412 1 1482 518 85 0 24 chrX 117616137 117616221 -49034075 + L1_Mus1 LINE L1 6486 6567 0 1 1482 658 311 27 9 chrX 117616221 117616445 -49033851 - Lx9 LINE L1 -1104 6540 6313 1 1482 1059 296 55 61 chrX 117617243 117617880 -49032416 - L1_Rod LINE L1 -2176 3671 3033 1 1482 486 0 0 0 chrX 117617880 117617934 -49032362 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 1482 1126 70 0 0 chrX 117617937 117618079 -49032217 - B1_Mus1 SINE Alu -6 142 1 1 1482 1059 296 55 61 chrX 117618079 117618208 -49032088 - L1_Rod LINE L1 -2815 3032 2908 1 1482 31 26 0 0 chrX 117618556 117618594 -49031702 + AT_rich Low_complexity Low_complexity 1 38 0 1 1482 2281 140 30 12 chrX 117618619 117619045 -49031251 - Lx3A LINE L1 0 6981 6548 1 1482 5921 151 15 1 chrX 117619044 117620022 -49030274 - Lx3B LINE L1 -8 6965 5974 1 1482 588 161 0 0 chrX 117620022 117620115 -49030181 - Lx3A LINE L1 -461 6520 6428 1 1482 351 0 0 0 chrX 117622020 117622059 -49028237 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1482 1660 214 3 6 chrX 117622214 117622557 -49027739 - L1_Mur2 LINE L1 -625 5252 4911 1 1482 7083 114 7 19 chrX 117622550 117623961 -49026335 + Lx LINE L1 5259 6653 -1 1 1482 358 325 34 74 chrX 117624017 117624193 -49026103 - MTEa LTR MaLR -157 222 54 1 1482 21 36 0 0 chrX 117624671 117624699 -49025597 + AT_rich Low_complexity Low_complexity 1 28 0 1 1482 894 335 147 6 chrX 117625757 117626289 -49024007 - Lx9 LINE L1 -427 7217 6611 1 1482 387 0 0 0 chrX 117626576 117626619 -49023677 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1482 259 341 21 31 chrX 117627174 117627286 -49023010 + B1F SINE Alu 5 115 -5 1 1482 237 277 0 0 chrX 117627290 117627355 -49022941 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 1 1482 980 105 74 6 chrX 117628125 117628288 -49022008 + L1_Mus3 LINE L1 6459 6632 -6 1 1482 777 124 37 14 chrX 117628478 117628786 -49021510 + CT-rich Low_complexity Low_complexity 1 314 0 1 1482 1171 83 0 22 chrX 117628786 117628970 -49021326 + (TCCCC)n Simple_repeat Simple_repeat 1 180 0 1 1482 212 213 16 0 chrX 117628970 117629031 -49021265 + CT-rich Low_complexity Low_complexity 4 65 0 1 1482 287 97 306 0 chrX 117629303 117629365 -49020931 + ORR1B1 LTR MaLR 314 394 0 1 1482 2509 194 31 104 chrX 117629407 117630149 -49020147 + RMER6C LTR ERVK 3 690 0 1 1482 279 0 0 0 chrX 117630322 117630353 -49019943 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 1482 755 105 0 0 chrX 117630855 117631002 -49019294 + L1_Mus1 LINE L1 6445 6567 0 1 1482 189 214 0 0 chrX 117631891 117631933 -49018363 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1482 414 0 0 0 chrX 117631981 117632027 -49018269 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1 1482 24840 91 103 55 chrX 117632060 117637213 -49013083 - L1Md_F2 LINE L1 0 6582 1170 1 1482 5898 155 35 13 chrX 117637198 117638240 -49012056 - L1Md_F2 LINE L1 -5391 1225 162 1 1482 696 307 74 32 chrX 117638241 117638618 -49011678 - MER57D LTR ERV1 -18 393 1 1 1482 323 316 49 38 chrX 117639082 117639266 -49011030 + MER33 DNA MER1_type 6 191 -133 1 1482 576 77 0 0 chrX 117639409 117639487 -49010809 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 1482 2279 63 3 0 chrX 117639761 117640236 -49010060 + L1_Mus1 LINE L1 6263 6567 0 1 1482 397 312 14 61 chrX 117640399 117640546 -49009750 + ID_B1 SINE B4 78 217 -7 1 1482 186 103 0 0 chrX 117640566 117640595 -49009701 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1482 21 0 0 0 chrX 117640796 117640817 -49009479 + AT_rich Low_complexity Low_complexity 1 21 0 1 1482 338 307 152 11 chrX 117640846 117641024 -49009272 - ID_B1 SINE B4 -18 206 4 1 1482 782 135 75 0 chrX 117641495 117641628 -49008668 + B1_Mus1 SINE Alu 3 145 -3 1 1482 444 37 0 0 chrX 117641629 117641683 -49008613 + (TAA)n Simple_repeat Simple_repeat 1 54 0 2 1482 239 292 48 86 chrX 117641828 117641933 -49008363 - B4A SINE B4 0 292 192 2 1482 292 250 18 0 chrX 117641977 117642033 -49008263 - B4A SINE B4 -214 78 22 2 1482 551 300 115 17 chrX 117642514 117642870 -49007426 + Lx9 LINE L1 7238 7628 -16 2 1482 24 91 0 0 chrX 117643056 117643122 -49007174 + AT_rich Low_complexity Low_complexity 1 66 0 2 1482 638 157 8 0 chrX 117644674 117644795 -49005501 + CT-rich Low_complexity Low_complexity 3 124 0 2 1482 603 0 0 0 chrX 117645186 117645253 -49005043 + (TA)n Simple_repeat Simple_repeat 2 68 0 2 1482 354 23 0 0 chrX 117648026 117648069 -49002227 + (TC)n Simple_repeat Simple_repeat 2 44 0 2 1482 252 0 0 0 chrX 117648069 117648096 -49002200 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1482 34 24 0 0 chrX 117648115 117648156 -49002140 + AT_rich Low_complexity Low_complexity 1 41 0 2 1482 2872 275 46 88 chrX 117648156 117648255 -49002041 - L1Md_A LINE L1 -1 6972 6855 2 1482 180 0 0 0 chrX 117648255 117648275 -49002021 + (CACCC)n Simple_repeat Simple_repeat 5 24 0 2 1482 17093 37 4 8 chrX 117648275 117651273 -48999023 - L1Md_A LINE L1 -119 6854 3935 2 1482 9239 10 0 0 chrX 117651270 117652342 -48997954 + L1Md_A LINE L1 2848 3919 -1964 2 1482 2456 110 44 3 chrX 117652340 117652724 -48997572 - Lx3A LINE L1 -414 6567 6168 2 1482 485 325 30 24 chrX 117652764 117652841 -48997455 + ID SINE ID 3 80 -144 2 1482 317 324 37 19 chrX 117652841 117652948 -48997348 + PB1D10 SINE Alu 1 109 -8 2 1482 29 78 0 0 chrX 117653974 117654038 -48996258 + AT_rich Low_complexity Low_complexity 1 64 0 2 1482 391 256 35 0 chrX 117655267 117655353 -48994943 - B3A SINE B2 -102 96 8 2 1482 21 71 0 0 chrX 117655786 117655828 -48994468 + AT_rich Low_complexity Low_complexity 1 42 0 2 1482 2309 64 0 0 chrX 117655828 117656123 -48994173 - L1_Mus1 LINE L1 -3 6564 6270 2 1482 22 88 0 0 chrX 117656413 117656470 -48993826 + AT_rich Low_complexity Low_complexity 1 57 0 2 1482 7965 27 3 3 chrX 117656617 117657546 -48992750 - RLTR13B3 LTR ERVK 0 929 1 2 1482 227 114 0 0 chrX 117659625 117659660 -48990636 + B4A SINE B4 210 244 -48 2 1482 180 0 0 0 chrX 117659785 117659805 -48990491 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2 1482 5441 133 59 11 chrX 117659805 117660751 -48989545 - Lx3A LINE L1 -13 6968 5977 2 1482 9161 113 32 17 chrX 117660751 117662305 -48987991 + MusHAL1 LINE L1 738 2314 -398 2 1482 2066 195 71 2 chrX 117662781 117663202 -48987094 - Lx4A LINE L1 0 7058 6609 2 1482 450 393 18 21 chrX 117663720 117664060 -48986236 + Lx7 LINE L1 6930 7268 -428 2 1482 26 50 0 0 chrX 117664410 117664450 -48985846 + AT_rich Low_complexity Low_complexity 1 40 0 2 1482 661 38 28 19 chrX 117664968 117665074 -48985222 + L1Md_F2 LINE L1 6476 6582 0 2 1482 26 0 0 0 chrX 117665141 117665167 -48985129 + AT_rich Low_complexity Low_complexity 1 26 0 2 1482 229 306 38 75 chrX 117665491 117665597 -48984699 - MER34A LTR ERV1 0 587 486 2 1482 399 360 25 6 chrX 117665796 117665958 -48984338 - MER34A LTR ERV1 -402 169 5 2 1482 219 258 16 0 chrX 117666018 117666080 -48984216 + (TATATG)n Simple_repeat Simple_repeat 2 64 0 2 1482 22 0 0 0 chrX 117666157 117666179 -48984117 + AT_rich Low_complexity Low_complexity 1 22 0 2 1482 366 23 0 0 chrX 117666181 117666224 -48984072 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 1482 6959 75 1 16 chrX 117667100 117668037 -48982259 - L1Md_F2 LINE L1 0 6582 5660 2 1482 378 0 0 0 chrX 117668649 117668691 -48981605 + (TTA)n Simple_repeat Simple_repeat 2 43 0 2 1482 1056 90 7 0 chrX 117668691 117668835 -48981461 - B1_Mus2 SINE Alu -2 145 1 2 1482 22 70 0 0 chrX 117669045 117669088 -48981208 + AT_rich Low_complexity Low_complexity 1 43 0 2 1482 248 347 31 0 chrX 117669754 117669852 -48980444 - L2a LINE L2 -287 3139 3039 2 1482 426 211 9 27 chrX 117669949 117670061 -48980235 - Lx9 LINE L1 -668 6976 6867 2 1482 453 213 24 0 chrX 117670101 117670228 -48980068 + Lx9 LINE L1 7507 7636 -8 2 1482 33 0 0 0 chrX 117670233 117670266 -48980030 + AT_rich Low_complexity Low_complexity 1 33 0 2 1482 282 346 45 38 chrX 117670398 117670530 -48979766 + MER58A DNA MER1_type 81 213 -11 2 1482 370 352 33 50 chrX 117671138 117671380 -48978916 - L1MB8 LINE L1 -12 6166 5929 2 1482 3376 199 59 30 chrX 117671545 117672305 -48977991 - Lx4B LINE L1 -11 7047 6266 2 1482 4200 139 23 74 chrX 117672329 117673182 -48977114 + L1_Mur1 LINE L1 4275 5084 -802 2 1482 5502 174 35 15 chrX 117673179 117674412 -48975884 - Lx4B LINE L1 -1085 5973 4711 2 1482 494 112 0 0 chrX 117674618 117674698 -48975598 - L1_Mus1 LINE L1 -1 6566 6487 2 1482 3712 87 2 31 chrX 117674699 117675086 -48975210 + L1_Mus1 LINE L1 5863 6250 -317 2 1482 4203 45 6 6 chrX 117675086 117675620 -48974676 + L1Md_F2 LINE L1 6049 6582 0 2 1482 3712 87 2 31 chrX 117675620 117675754 -48974542 + L1_Mus1 LINE L1 6251 6369 -198 2 1482 2495 167 318 14 chrX 117675736 117676466 -48973830 - Lx4B LINE L1 -1117 4760 3809 2 1482 302 247 12 0 chrX 117676469 117676554 -48973742 - Lx7 LINE L1 -239 7457 7372 2 1482 473 255 124 0 chrX 117676558 117676711 -48973585 - Lx4B LINE L1 -7493 235 64 2 1482 191 411 71 0 chrX 117676740 117676881 -48973415 - L3 LINE CR1 -5 4484 4334 2 1482 22 0 0 0 chrX 117677966 117677988 -48972308 + AT_rich Low_complexity Low_complexity 1 22 0 2 1482 22 94 0 0 chrX 117678097 117678161 -48972135 + AT_rich Low_complexity Low_complexity 1 64 0 2 1482 22 0 0 0 chrX 117679276 117679298 -48970998 + AT_rich Low_complexity Low_complexity 1 22 0 2 1482 211 189 0 36 chrX 117680170 117680225 -48970071 + T-rich Low_complexity Low_complexity 2 54 0 2 1482 2290 42 3 0 chrX 117680361 117680644 -48969652 - L1Md_F2 LINE L1 -3 6579 6296 2 1482 360 0 0 0 chrX 117680849 117680889 -48969407 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 1482 378 0 0 0 chrX 117680889 117680930 -48969366 + (GA)n Simple_repeat Simple_repeat 2 43 0 2 1482 1958 57 0 0 chrX 117682298 117682542 -48967754 - L1Md_F2 LINE L1 -97 6485 6242 2 1482 1258 89 16 11 chrX 117682531 117682713 -48967583 - L1Md_F3 LINE L1 -94 6490 6308 2 1482 5998 34 1 38 chrX 117682697 117683562 -48966734 + L1Md_F3 LINE L1 5496 6333 -249 2 1482 383 333 13 60 chrX 117683733 117683966 -48966330 - Lx9 LINE L1 -174 7470 7249 2 1482 603 0 0 0 chrX 117683997 117684064 -48966232 + (TC)n Simple_repeat Simple_repeat 2 68 0 2 1482 708 308 16 44 chrX 117684200 117684451 -48965845 - Lx9 LINE L1 -452 7192 6949 2 1482 25 0 0 0 chrX 117684639 117684664 -48965632 + AT_rich Low_complexity Low_complexity 1 25 0 2 1482 222 91 0 0 chrX 117684728 117684761 -48965535 + (CACCAT)n Simple_repeat Simple_repeat 1 33 0 2 1482 21 57 0 0 chrX 117685321 117685356 -48964940 + AT_rich Low_complexity Low_complexity 1 35 0 2 1482 25 51 0 0 chrX 117685661 117685700 -48964596 + AT_rich Low_complexity Low_complexity 1 39 0 2 1482 1205 110 0 45 chrX 117685852 117686052 -48964244 + B2_Mm2 SINE B2 1 191 -4 2 1482 512 289 13 0 chrX 117686415 117686564 -48963732 - Lx6 LINE L1 -2 7458 7308 2 1482 25 31 0 0 chrX 117686571 117686603 -48963693 + AT_rich Low_complexity Low_complexity 1 32 0 2 1482 28 0 0 0 chrX 117686748 117686776 -48963520 + AT_rich Low_complexity Low_complexity 1 28 0 2 1482 28 71 0 0 chrX 117686849 117686905 -48963391 + AT_rich Low_complexity Low_complexity 1 56 0 2 1482 8122 45 1 2 chrX 117688787 117690458 -48959838 - L1Md_F2 LINE L1 -10 6572 4904 2 1482 322 390 55 5 chrX 117691419 117691620 -48958676 + B4 SINE B4 82 292 0 2 1482 1129 82 0 0 chrX 117692118 117692264 -48958032 + B1_Mus2 SINE Alu 1 146 -1 2 1482 21 0 0 0 chrX 117694919 117694940 -48955356 + AT_rich Low_complexity Low_complexity 1 21 0 2 1482 1237 204 101 42 chrX 117695281 117695709 -48954587 - RMER4B LTR ERVK 0 466 15 2 1482 1095 124 0 0 chrX 117695959 117696161 -48954135 + (TTTC)n Simple_repeat Simple_repeat 1 202 0 2 1482 567 29 0 0 chrX 117697105 117697174 -48953122 + (TAG)n Simple_repeat Simple_repeat 1 69 0 2 1482 204 67 0 0 chrX 117697175 117697205 -48953091 + (TTTTTG)n Simple_repeat Simple_repeat 6 35 0 2 1482 315 0 0 0 chrX 117697295 117697330 -48952966 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1482 555 195 0 0 chrX 117697714 117697827 -48952469 + (TA)n Simple_repeat Simple_repeat 1 113 0 2 1482 216 0 0 0 chrX 117699018 117699042 -48951254 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1482 6310 224 55 4 chrX 117699332 117701130 -48949166 - Lx5 LINE L1 0 7050 5162 2 1482 3938 178 105 53 chrX 117701131 117702125 -48948171 + Lx5 LINE L1 4134 5178 -699 2 1482 216 146 0 68 chrX 117702175 117702234 -48948062 + T-rich Low_complexity Low_complexity 3 57 0 2 1483 337 111 93 0 chrX 117703158 117703212 -48947084 + HAL1-3A_ME LINE L1 1975 2033 -825 2 1483 229 308 0 0 chrX 117703215 117703280 -48947016 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 1483 301 77 0 0 chrX 117703280 117703319 -48946977 + HAL1-3A_ME LINE L1 1976 2014 -844 2 1483 599 350 30 0 chrX 117703539 117703742 -48946554 - B3 SINE B2 -6 210 2 2 1483 562 223 35 28 chrX 117703834 117703977 -48946319 - ORR1D1 LTR MaLR -229 145 2 2 1483 230 242 31 10 chrX 117705003 117705099 -48945197 + (TA)n Simple_repeat Simple_repeat 2 99 0 2 1483 1152 314 167 22 chrX 117705675 117706716 -48943580 - Cheshire DNA MER1_type -450 1970 700 2 1483 354 298 72 58 chrX 117706855 117707062 -48943234 - RLTR12B LTR ERVK -314 214 5 2 1483 600 328 111 39 chrX 117707086 117707350 -48942946 - Cheshire DNA MER1_type -1723 697 395 2 1483 287 25 25 0 chrX 117707350 117707390 -48942906 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1483 600 328 111 39 chrX 117707390 117707541 -48942755 - Cheshire DNA MER1_type -2026 394 252 2 1483 22 0 0 0 chrX 117707657 117707679 -48942617 + AT_rich Low_complexity Low_complexity 1 22 0 2 1483 370 319 140 50 chrX 117708478 117708993 -48941303 - LTR48 LTR ERV1 -41 746 186 2 1483 252 0 0 85 chrX 117709070 117709117 -48941179 + (TTTTTG)n Simple_repeat Simple_repeat 6 48 0 2 1483 1037 102 0 0 chrX 117709117 117709264 -48941032 - B1_Mus2 SINE Alu 0 147 1 2 1483 26 74 0 0 chrX 117710034 117710088 -48940208 + AT_rich Low_complexity Low_complexity 1 54 0 2 1483 27 0 0 0 chrX 117710186 117710213 -48940083 + AT_rich Low_complexity Low_complexity 1 27 0 2 1483 317 246 0 14 chrX 117711107 117711181 -48939115 - Lx8 LINE L1 -192 7281 7209 2 1483 938 104 52 0 chrX 117711321 117711456 -48938840 + B1_Mus1 SINE Alu 1 142 -6 2 1483 255 21 20 60 chrX 117711459 117711509 -48938787 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 3 1483 387 331 35 12 chrX 117711509 117711680 -48938616 - Lx8 LINE L1 -469 7004 6830 2 1483 1507 325 59 33 chrX 117711690 117712657 -48937639 - Lx9 LINE L1 -7 7637 6646 3 1483 515 237 24 184 chrX 117712669 117712881 -48937415 - RMER12 LTR ERVK 0 1322 1145 3 1483 3162 236 151 33 chrX 117712970 117713368 -48936928 - RMER12 LTR ERVK -85 1237 769 3 1483 414 127 0 0 chrX 117713368 117713439 -48936857 + (TGGA)n Simple_repeat Simple_repeat 1 71 0 3 1483 3162 236 151 33 chrX 117713439 117714147 -48936149 - RMER12 LTR ERVK -554 768 2 3 1483 457 313 7 7 chrX 117714150 117714298 -48935998 - Lx8 LINE L1 -988 6485 6338 2 1483 387 0 0 0 chrX 117714396 117714439 -48935857 + (TTA)n Simple_repeat Simple_repeat 3 45 0 3 1483 4132 223 36 12 chrX 117714439 117715380 -48934916 - Lx2B LINE L1 -32 6968 6005 3 1483 714 125 0 0 chrX 117715506 117715618 -48934678 + (GGGAGA)n Simple_repeat Simple_repeat 1 112 0 3 1483 9125 106 17 6 chrX 117716669 117718885 -48931411 + L1_Mus3 LINE L1 4396 6638 0 3 1483 182 62 0 30 chrX 117719279 117719312 -48930984 + (GTTTG)n Simple_repeat Simple_repeat 2 33 0 3 1483 1128 68 7 0 chrX 117719955 117720101 -48930195 + B1_Mm SINE Alu 1 147 0 3 1483 358 50 36 48 chrX 117720104 117720188 -48930108 + (CAAA)n Simple_repeat Simple_repeat 2 84 0 3 1483 484 281 11 63 chrX 117720604 117720779 -48929517 + B3A SINE B2 33 198 0 3 1483 566 39 13 0 chrX 117721017 117721094 -48929202 + (TTTTG)n Simple_repeat Simple_repeat 2 79 0 3 1483 992 103 0 0 chrX 117721094 117721230 -48929066 - B1_Mm SINE Alu -10 137 2 3 1483 1430 84 0 10 chrX 117721352 117721544 -48928752 + B2_Mm2 SINE B2 1 190 -5 3 1483 3892 168 93 13 chrX 117722058 117722506 -48927790 - L1_Mur1 LINE L1 -2569 3317 2812 3 1483 336 83 0 0 chrX 117722506 117722554 -48927742 + (TTG)n Simple_repeat Simple_repeat 2 49 0 3 1483 2997 225 86 11 chrX 117722554 117722943 -48927353 - L1_Mur3 LINE L1 -3077 2803 2414 3 1483 201 39 0 0 chrX 117723021 117723047 -48927249 + (TTTTTG)n Simple_repeat Simple_repeat 4 29 0 3 1483 21 0 0 0 chrX 117723153 117723174 -48927122 + AT_rich Low_complexity Low_complexity 1 21 0 3 1483 459 0 0 0 chrX 117724594 117724645 -48925651 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1483 351 0 0 0 chrX 117724645 117724683 -48925613 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 1483 234 0 0 0 chrX 117724683 117724708 -48925588 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 1483 229 417 8 0 chrX 117725984 117726104 -48924192 + MIRb SINE MIR 23 143 -125 3 1483 1078 70 0 0 chrX 117729962 117730104 -48920192 - B1_Mus1 SINE Alu -5 143 2 3 1483 2712 229 44 32 chrX 117730457 117731209 -48919087 - Lx2B LINE L1 -22 6978 6218 3 1483 22 0 0 0 chrX 117731517 117731539 -48918757 + AT_rich Low_complexity Low_complexity 1 22 0 3 1483 582 41 0 0 chrX 117731650 117731723 -48918573 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 3 1483 249 366 55 21 chrX 117731934 117732079 -48918217 + RSINE1 SINE B4 3 152 -13 3 1483 333 0 0 0 chrX 117732082 117732119 -48918177 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1483 1019 92 0 0 chrX 117732370 117732511 -48917785 - B1_Mus2 SINE Alu 0 147 7 3 1483 22 56 0 0 chrX 117733452 117733488 -48916808 + AT_rich Low_complexity Low_complexity 1 36 0 3 1483 5046 69 23 13 chrX 117733841 117734530 -48915766 + L1Md_F2 LINE L1 5887 6582 0 3 1483 2536 121 51 0 chrX 117735184 117735597 -48914699 - L1_Mus3 LINE L1 -10 6628 6195 3 1483 25 31 0 0 chrX 117735932 117735964 -48914332 + AT_rich Low_complexity Low_complexity 1 32 0 3 1483 803 313 49 47 chrX 117736107 117736516 -48913780 - Lx2B LINE L1 -1 6999 6590 3 1483 3064 180 9 14 chrX 117736531 117737112 -48913184 - L1_Mus4 LINE L1 -386 5497 4920 3 1483 3550 101 40 0 chrX 117737112 117737703 -48912593 + L1_Mus4 LINE L1 5508 6118 -518 3 1483 264 187 47 0 chrX 117737700 117737767 -48912529 + L1_Mur1 LINE L1 5400 5478 -405 3 1483 600 276 182 37 chrX 117738317 117738774 -48911522 - L1_Rod LINE L1 -121 5726 5258 3 1483 24 32 0 0 chrX 117739175 117739206 -48911090 + AT_rich Low_complexity Low_complexity 1 31 0 3 1483 336 310 10 0 chrX 117739291 117739391 -48910905 - B3 SINE B2 0 216 116 3 1483 999 259 70 48 chrX 117739391 117739764 -48910532 - RMER6C LTR ERVK 0 690 310 3 1483 2448 132 7 10 chrX 117739780 117740185 -48910111 - Lx3_Mus LINE L1 0 7009 6606 3 1483 1716 172 30 50 chrX 117740194 117740555 -48909741 - Lx3B LINE L1 -27 6946 6593 3 1483 2028 200 72 96 chrX 117741788 117742495 -48907801 + RMER6C LTR ERVK 1 690 0 3 1483 25 75 0 0 chrX 117742594 117742647 -48907649 + AT_rich Low_complexity Low_complexity 1 53 0 3 1483 498 33 0 0 chrX 117742671 117742731 -48907565 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 1483 1034 108 0 20 chrX 117742869 117743020 -48907276 + B1_Mus1 SINE Alu 1 148 0 3 1483 216 86 0 0 chrX 117743022 117743057 -48907239 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1483 549 330 66 26 chrX 117744004 117744309 -48905987 - Lx8 LINE L1 -6 7467 7151 3 1483 24 53 0 0 chrX 117744540 117744578 -48905718 + AT_rich Low_complexity Low_complexity 1 38 0 3 1483 316 308 44 0 chrX 117744578 117744713 -48905583 + L1M2 LINE L1 5510 5649 -529 3 1483 1079 82 0 7 chrX 117744731 117744878 -48905418 + B1_Mus2 SINE Alu 2 147 0 3 1483 25 0 0 0 chrX 117744884 117744909 -48905387 + AT_rich Low_complexity Low_complexity 1 25 0 3 1483 610 296 402 11 chrX 117744915 117745180 -48905116 - ORR1D2 LTR MaLR 0 370 2 3 1483 2144 170 5 3 chrX 117745744 117746122 -48904174 - L1_Mm LINE L1 -827 5056 4678 3 1483 1209 172 20 20 chrX 117746117 117746372 -48903924 + L1_Mur2 LINE L1 5043 5297 -580 3 1483 7290 129 5 18 chrX 117746364 117748099 -48902197 + L1VL4 LINE L1 180 2276 -3610 3 1483 1091 257 51 41 chrX 117748099 117748415 -48901881 - Lx5 LINE L1 -685 6365 6047 3 1483 1769 70 8 12 chrX 117749895 117750140 -48900156 + L1Md_F2 LINE L1 6337 6580 -2 3 1483 3857 68 2 10 chrX 117750330 117750847 -48899449 + L1Md_F2 LINE L1 6069 6581 -1 3 1483 21 0 0 0 chrX 117751788 117751809 -48898487 + AT_rich Low_complexity Low_complexity 1 21 0 3 1483 222 118 0 0 chrX 117752617 117752651 -48897645 + (GA)n Simple_repeat Simple_repeat 1 34 0 3 1483 21 36 0 0 chrX 117752702 117752730 -48897566 + AT_rich Low_complexity Low_complexity 1 28 0 3 1483 25 51 0 0 chrX 117754485 117754524 -48895772 + AT_rich Low_complexity Low_complexity 1 39 0 3 1483 260 169 23 35 chrX 117755141 117755227 -48895069 - Lx4B LINE L1 -4 7054 6970 3 1483 672 154 9 0 chrX 117755227 117755337 -48894959 - ORR1B1 LTR MaLR -72 322 212 3 1483 563 264 0 9 chrX 117755331 117755442 -48894854 + ID_B1 SINE B4 100 209 -15 3 1483 909 71 0 0 chrX 117755556 117755682 -48894614 - L1Md_F2 LINE L1 -12 6570 6445 3 1483 22 0 0 0 chrX 117756046 117756068 -48894228 + AT_rich Low_complexity Low_complexity 1 22 0 3 1483 2896 69 5 10 chrX 117756262 117756659 -48893637 - MTA_Mm LTR MaLR -1 395 1 3 1483 26 30 0 0 chrX 117757062 117757095 -48893201 + AT_rich Low_complexity Low_complexity 1 33 0 3 1483 214 147 0 0 chrX 117757925 117757959 -48892337 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 1483 390 184 0 0 chrX 117758072 117758148 -48892148 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 1483 276 100 0 0 chrX 117758766 117758806 -48891490 + (TTA)n Simple_repeat Simple_repeat 1 40 0 3 1483 7680 144 55 19 chrX 117758814 117760493 -48889803 - Lx3C LINE L1 -10 6966 5244 3 1483 1989 248 95 55 chrX 117760500 117761334 -48888962 + RMER6C LTR ERVK 8 716 -4 3 1483 620 299 65 27 chrX 117762092 117762523 -48887773 + Lx7 LINE L1 5641 6075 -1569 3 1483 188 297 0 59 chrX 117762909 117762977 -48887319 + L2c LINE L2 3313 3376 -11 3 1483 32 43 0 0 chrX 117763095 117763141 -48887155 + AT_rich Low_complexity Low_complexity 1 46 0 3 1483 28 0 0 0 chrX 117763922 117763950 -48886346 + AT_rich Low_complexity Low_complexity 1 28 0 3 1483 7354 84 11 0 chrX 117764579 117766116 -48884180 - L1_Mus1 LINE L1 0 6567 5016 3 1483 32 43 0 0 chrX 117767048 117767094 -48883202 + AT_rich Low_complexity Low_complexity 1 46 0 3 1483 2586 143 50 12 chrX 117767223 117767770 -48882526 - Lx3B LINE L1 -188 6394 5594 3 1483 1719 79 12 0 chrX 117767770 117768010 -48882286 + L1_Mus2 LINE L1 6324 6566 0 3 1483 1007 113 0 0 chrX 117768037 117768187 -48882109 + L1_Mus2 LINE L1 6417 6566 0 3 1483 642 202 5 0 chrX 117768197 117768320 -48881976 - L1_Mur1 LINE L1 -534 5639 5508 3 1483 291 140 0 0 chrX 117768446 117768496 -48881800 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1483 234 0 0 0 chrX 117769167 117769193 -48881103 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1483 379 282 85 8 chrX 117769768 117769886 -48880410 - Lx2B LINE L1 -67 6933 6807 3 1483 292 174 0 0 chrX 117769985 117770031 -48880265 + RLTR24 LTR ERV1 1 46 -483 3 1483 1254 254 119 62 chrX 117770236 117770620 -48879676 + RLTR24 LTR ERV1 33 414 -115 3 1483 216 0 0 0 chrX 117770620 117770644 -48879652 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1483 407 52 17 0 chrX 117770652 117770710 -48879586 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 1483 1254 254 119 62 chrX 117770710 117770786 -48879510 + RLTR24 LTR ERV1 434 527 -2 3 1483 516 62 0 0 chrX 117770950 117771015 -48879281 - L1_Mus2 LINE L1 -346 6220 6156 3 1483 2121 122 3 0 chrX 117771015 117771326 -48878970 + L1_Mus2 LINE L1 6253 6564 -2 3 1483 22 0 0 0 chrX 117772095 117772117 -48878179 + AT_rich Low_complexity Low_complexity 1 22 0 3 1483 35 41 0 0 chrX 117772168 117772217 -48878079 + AT_rich Low_complexity Low_complexity 1 49 0 3 1483 294 312 52 21 chrX 117772338 117772531 -48877765 - L1M4 LINE L1 -2020 4126 3928 3 1483 1138 238 70 19 chrX 117773358 117773628 -48876668 - ORR1C1 LTR MaLR -8 370 87 3 1483 2697 188 43 90 chrX 117773873 117774586 -48875710 + RMER6C LTR ERVK 11 690 0 3 1483 27 0 0 0 chrX 117774586 117774613 -48875683 + AT_rich Low_complexity Low_complexity 1 27 0 4 1483 21 0 0 0 chrX 117775378 117775399 -48874897 + AT_rich Low_complexity Low_complexity 1 21 0 4 1483 21 36 0 0 chrX 117776337 117776365 -48873931 + AT_rich Low_complexity Low_complexity 1 28 0 4 1483 354 108 0 0 chrX 117777821 117777886 -48872410 + (A)n Simple_repeat Simple_repeat 1 65 0 4 1483 312 292 31 0 chrX 117778456 117778552 -48871744 + B3A SINE B2 43 141 -57 4 1483 2676 68 14 8 chrX 117778916 117779286 -48871010 + L1Md_F2 LINE L1 6211 6582 0 4 1483 28 95 0 0 chrX 117779313 117779397 -48870899 + AT_rich Low_complexity Low_complexity 1 84 0 4 1483 339 377 22 7 chrX 117780977 117781116 -48869180 - MLT1F1 LTR MaLR -13 556 416 4 1483 22 35 0 0 chrX 117781566 117781595 -48868701 + AT_rich Low_complexity Low_complexity 1 29 0 4 1483 22 0 0 0 chrX 117781925 117781947 -48868349 + AT_rich Low_complexity Low_complexity 1 22 0 4 1483 459 119 48 0 chrX 117782158 117782242 -48868054 - L1_Mur1 LINE L1 -845 5041 4954 4 1483 4767 136 5 4 chrX 117782236 117782988 -48867308 + L1_Mm LINE L1 5030 5782 -101 4 1483 2427 86 3 0 chrX 117783013 117783351 -48866945 - L1_Mus2 LINE L1 -1 6565 6227 4 1483 28 29 0 0 chrX 117783370 117783405 -48866891 + AT_rich Low_complexity Low_complexity 1 35 0 4 1483 6449 139 19 10 chrX 117783473 117783491 -48866805 - Lx LINE L1 0 6654 6637 4 1483 445 160 20 10 chrX 117783491 117783592 -48866704 - Lx3A LINE L1 -3 6978 6877 4 1483 6449 142 18 12 chrX 117783592 117784766 -48865530 - Lx LINE L1 -18 6636 5460 4 1483 435 329 119 49 chrX 117785068 117785554 -48864742 + L1M5 LINE L1 3044 3563 -2583 4 1483 452 146 12 0 chrX 117785559 117785641 -48864655 + L1_Mus2 LINE L1 6484 6566 0 4 1483 243 267 34 34 chrX 117785908 117785997 -48864299 + L1M3 LINE L1 4025 4113 -2027 4 1483 22 0 0 0 chrX 117786552 117786574 -48863722 + AT_rich Low_complexity Low_complexity 1 22 0 4 1483 500 299 34 0 chrX 117787063 117787210 -48863086 + MER5A DNA MER1_type 4 155 -34 4 1483 37864 29 0 0 chrX 117787617 117794248 -48856048 - L1Md_T LINE L1 0 6585 1 4 1483 4626 92 10 25 chrX 117794614 117795290 -48855006 + Lx3_Mus LINE L1 6344 7009 0 4 1483 880 115 13 7 chrX 117795511 117795660 -48854636 + (GAAA)n Simple_repeat Simple_repeat 2 151 0 4 1483 22 0 0 0 chrX 117795770 117795792 -48854504 + AT_rich Low_complexity Low_complexity 1 22 0 4 1483 1314 156 4 16 chrX 117796879 117797121 -48853175 + Lx LINE L1 6416 6654 0 4 1483 1859 154 9 58 chrX 117797415 117797759 -48852537 - ORR1A2 LTR MaLR 0 327 1 4 1483 9100 155 80 28 chrX 117797759 117799624 -48850672 - ORR1A2-int LTR MaLR 0 1963 2 4 1483 1813 170 12 21 chrX 117799625 117799955 -48850341 - ORR1A2 LTR MaLR 0 327 1 4 1483 23 33 0 0 chrX 117800030 117800060 -48850236 + AT_rich Low_complexity Low_complexity 1 30 0 4 1483 285 29 0 0 chrX 117800889 117800923 -48849373 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1483 306 0 0 0 chrX 117801570 117801604 -48848692 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1483 622 161 0 18 chrX 117802107 117802221 -48848075 - BC1_Mm scRNA scRNA -40 112 1 4 1483 201 260 0 14 chrX 117802423 117802497 -48847799 + (TAAA)n Simple_repeat Simple_repeat 4 76 0 4 1483 219 0 0 109 chrX 117802766 117802812 -48847484 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 4 1483 24 32 0 0 chrX 117803457 117803488 -48846808 + AT_rich Low_complexity Low_complexity 1 31 0 4 1483 24 0 0 0 chrX 117803686 117803710 -48846586 + AT_rich Low_complexity Low_complexity 1 24 0 4 1483 549 112 0 11 chrX 117804068 117804158 -48846138 - L1_Mur1 LINE L1 -845 5041 4953 4 1483 1188 161 22 0 chrX 117804155 117804379 -48845917 + L1_Mm LINE L1 5034 5262 -621 4 1483 6555 87 28 14 chrX 117804355 117805297 -48844999 + L1_Mus3 LINE L1 5679 6633 -5 4 1483 295 244 61 0 chrX 117805707 117805789 -48844507 + MLT1A0 LTR MaLR 271 357 -8 4 1483 271 285 65 49 chrX 117806191 117806289 -48844007 + PB1D10 SINE Alu 9 107 -10 4 1483 1899 50 0 4 chrX 117806289 117806531 -48843765 + L1Md_F2 LINE L1 6327 6567 -15 4 1483 261 226 26 46 chrX 117806703 117806798 -48843498 + T-rich Low_complexity Low_complexity 61 154 0 4 1483 288 283 153 32 chrX 117806798 117806922 -48843374 - B1_Mur3 SINE Alu -8 141 3 4 1483 261 226 26 46 chrX 117806922 117806979 -48843317 + T-rich Low_complexity Low_complexity 5 60 0 4 1483 1495 307 55 21 chrX 117807543 117808156 -48842140 - Lx8 LINE L1 -711 6762 6129 4 1483 2142 208 91 6 chrX 117811124 117811631 -48838665 + RMER6C LTR ERVK 1 550 -140 4 1483 21 0 0 0 chrX 117811686 117811707 -48838589 + AT_rich Low_complexity Low_complexity 1 21 0 4 1483 4265 76 0 0 chrX 117811770 117812334 -48837962 - L1Md_T LINE L1 0 6582 6019 4 1483 6297 14 0 0 chrX 117812334 117813187 -48837109 + L1Md_T LINE L1 5164 6016 -566 4 1483 21 71 0 0 chrX 117813300 117813342 -48836954 + AT_rich Low_complexity Low_complexity 1 42 0 4 1483 198 331 137 47 chrX 117813411 117813601 -48836695 - L2a LINE L2 -1 3425 3219 4 1483 2626 171 74 69 chrX 117814021 117814686 -48835610 + RMER6C LTR ERVK 23 690 0 4 1483 24 32 0 0 chrX 117814719 117814750 -48835546 + AT_rich Low_complexity Low_complexity 1 31 0 4 1483 457 220 163 42 chrX 117815297 117815463 -48834833 - B2_Mm2 SINE B2 -9 186 1 4 1483 336 24 0 0 chrX 117815474 117815515 -48834781 + (TTG)n Simple_repeat Simple_repeat 2 42 0 4 1483 747 214 7 0 chrX 117815515 117815649 -48834647 - B1_Mur3 SINE Alu -8 141 7 4 1483 3286 249 54 21 chrX 117818285 117819131 -48831165 - Lx7 LINE L1 -840 6856 5974 4 1483 4548 179 38 18 chrX 117819131 117820021 -48830275 - RMER13B LTR ERVK 0 908 1 4 1483 3286 249 54 21 chrX 117820021 117820093 -48830203 - Lx7 LINE L1 -1723 5973 5907 4 1483 923 262 93 15 chrX 117820098 117820623 -48829673 + Lx6 LINE L1 6839 7675 -21 4 1483 38 22 0 0 chrX 117822089 117822134 -48828162 + AT_rich Low_complexity Low_complexity 1 45 0 4 1483 198 71 0 0 chrX 117822382 117822410 -48827886 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1483 22 35 0 0 chrX 117824185 117824214 -48826082 + AT_rich Low_complexity Low_complexity 1 29 0 4 1483 27 62 0 0 chrX 117824324 117824372 -48825924 + AT_rich Low_complexity Low_complexity 1 48 0 4 1483 270 81 0 0 chrX 117824738 117824775 -48825521 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 1483 1795 271 70 28 chrX 117824776 117825486 -48824810 - Lx9 LINE L1 0 7644 6905 4 1483 1639 235 57 85 chrX 117825802 117826309 -48823987 + RMER1B Other Other 573 1065 -1 4 1483 246 143 0 0 chrX 117826948 117826997 -48823299 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1483 1026 251 103 16 chrX 117826999 117827319 -48822977 - MER34 LTR ERV1 -194 348 1 4 1483 238 246 18 0 chrX 117828001 117828058 -48822238 + Lx9 LINE L1 7384 7441 -203 4 1483 27 29 0 0 chrX 117828212 117828246 -48822050 + AT_rich Low_complexity Low_complexity 1 34 0 4 1483 2624 206 56 45 chrX 117828418 117829101 -48821195 - RMER6C LTR ERVK 0 690 1 4 185 22922 86 7 5 chrX 117829438 117833729 -48816567 + L1Md_F LINE L1 165 4461 -1422 4 1484 303 68 0 48 chrX 117834007 117834069 -48816227 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 4 1484 635 38 28 28 chrX 117834615 117834723 -48815573 + (TATAA)n Simple_repeat Simple_repeat 5 112 0 4 1484 2350 136 0 0 chrX 117835188 117835556 -48814740 - L1_Mm LINE L1 -848 5035 4668 4 1484 6695 110 19 2 chrX 117835571 117837170 -48813126 - L1_Mus2 LINE L1 -1 6565 4939 4 1484 11473 95 7 3 chrX 117837168 117838980 -48811316 - L1Md_F2 LINE L1 -573 6009 4189 4 1484 1408 64 15 0 chrX 117838981 117839183 -48811113 + L1_Mus3 LINE L1 6427 6631 -7 4 1484 1025 122 0 7 chrX 117839209 117839357 -48810939 + B1_Mus2 SINE Alu 1 147 0 4 1484 24 0 0 0 chrX 117839630 117839654 -48810642 + AT_rich Low_complexity Low_complexity 1 24 0 4 1484 21 0 0 0 chrX 117840025 117840046 -48810250 + AT_rich Low_complexity Low_complexity 1 21 0 4 1484 234 62 0 0 chrX 117840457 117840489 -48809807 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 1484 471 250 96 59 chrX 117840812 117840999 -48809297 + Lx7 LINE L1 7160 7353 -343 4 1484 28 61 0 0 chrX 117841486 117841535 -48808761 + AT_rich Low_complexity Low_complexity 1 49 0 4 1484 321 365 26 20 chrX 117841737 117841888 -48808408 - B3 SINE B2 -6 210 59 4 1484 1194 41 0 7 chrX 117842162 117842310 -48807986 + B1_Mus1 SINE Alu 1 147 -1 4 1484 31 0 0 0 chrX 117842563 117842594 -48807702 + AT_rich Low_complexity Low_complexity 1 31 0 4 1484 576 106 0 0 chrX 117843044 117843129 -48807167 + (TA)n Simple_repeat Simple_repeat 1 85 0 4 1484 21 0 0 0 chrX 117843418 117843439 -48806857 + AT_rich Low_complexity Low_complexity 1 21 0 4 1484 220 358 99 99 chrX 117844189 117844341 -48805955 + B3 SINE B2 19 170 -46 4 1484 2679 158 30 18 chrX 117845809 117846304 -48803992 - Lx2B LINE L1 -4 6996 6496 4 1484 2945 134 57 25 chrX 117846319 117846877 -48803419 + Lx3B LINE L1 5981 6556 -417 4 1484 317 290 52 31 chrX 117847573 117847669 -48802627 - B1_Mus1 SINE Alu -46 102 5 4 1484 238 294 35 12 chrX 117848040 117848126 -48802170 + Tigger5 DNA MER2_type 2318 2405 -1 4 1484 3185 78 51 0 chrX 117848438 117848886 -48801410 - Lx3_Mus LINE L1 -5 7004 6534 4 1484 1066 112 16 22 chrX 117850503 117850686 -48799610 - L1_Mus3 LINE L1 -1 6637 6456 4 1484 414 280 46 29 chrX 117850933 117851106 -48799190 + Lx8 LINE L1 7294 7469 -4 4 1484 251 354 10 0 chrX 117851383 117851479 -48798817 + MIR3 SINE MIR 69 165 -43 4 1484 180 298 43 0 chrX 117851574 117851621 -48798675 - MIR3 SINE MIR -47 161 113 4 1484 1159 102 16 31 chrX 117851898 117852091 -48798205 - B2_Mm2 SINE B2 -3 192 3 4 1484 1342 170 15 29 chrX 117852432 117852705 -48797591 + Lx LINE L1 6386 6654 0 4 1484 270 264 550 53 chrX 117852749 117852889 -48797407 - MTD LTR MaLR -98 321 113 5 1484 693 216 82 71 chrX 117852889 117853026 -48797270 + Lx9 LINE L1 7341 7493 -151 5 1484 294 29 0 0 chrX 117853026 117853061 -48797235 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1484 693 216 82 71 chrX 117853061 117853217 -48797079 + Lx9 LINE L1 7494 7637 -7 5 1484 473 252 73 0 chrX 117853242 117853365 -48796931 - MTD LTR MaLR -285 134 3 5 1484 27 0 0 0 chrX 117854444 117854471 -48795825 + AT_rich Low_complexity Low_complexity 1 27 0 5 1484 296 272 129 17 chrX 117854646 117854762 -48795534 - MER5A1 DNA MER1_type -37 129 1 5 1484 21 36 0 0 chrX 117854845 117854873 -48795423 + AT_rich Low_complexity Low_complexity 1 28 0 5 1484 25 75 0 0 chrX 117856030 117856083 -48794213 + AT_rich Low_complexity Low_complexity 1 53 0 5 1484 238 296 48 67 chrX 117856430 117856535 -48793761 - PB1D10 SINE Alu 0 117 15 5 1484 375 23 0 0 chrX 117857186 117857230 -48793066 + (TAA)n Simple_repeat Simple_repeat 2 45 0 5 1484 417 237 23 17 chrX 117858548 117858720 -48791576 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 5 1484 219 242 0 0 chrX 117859443 117859505 -48790791 + A-rich Low_complexity Low_complexity 1 62 0 5 1484 24 0 0 0 chrX 117859758 117859782 -48790514 + AT_rich Low_complexity Low_complexity 1 24 0 5 1484 371 228 5 57 chrX 117859871 117859970 -48790326 - B1_Mur4 SINE Alu -1 149 51 5 1484 275 333 8 57 chrX 117859876 117860000 -48790296 - ID_B1 SINE B4 -1 223 106 5 1484 5777 68 8 1 chrX 117860021 117860786 -48789510 + L1_Mus1 LINE L1 5798 6567 0 5 1484 23 43 0 21 chrX 117861792 117861818 -48788478 + AT_rich Low_complexity Low_complexity 1 26 0 5 1484 1032 134 40 6 chrX 117861818 117861991 -48788305 - B2_Mm2 SINE B2 -16 179 1 5 1484 23 43 0 21 chrX 117861991 117862012 -48788284 + AT_rich Low_complexity Low_complexity 1 21 0 5 1484 728 303 32 3 chrX 117862145 117862388 -48787908 - MTE2b LTR MaLR -143 236 1 5 1484 857 122 0 0 chrX 117862424 117862555 -48787741 + Lx3B LINE L1 6636 6766 -207 5 1484 2047 162 5 30 chrX 117862622 117863022 -48787274 + Lx2 LINE L1 6607 6996 -1 5 1484 23 0 0 0 chrX 117863548 117863571 -48786725 + AT_rich Low_complexity Low_complexity 1 23 0 5 1484 2503 82 8 8 chrX 117863753 117864109 -48786187 - L1Md_F2 LINE L1 -1 6581 6226 5 1484 39428 30 0 6 chrX 117864355 117870538 -48779758 - L1Md_A LINE L1 0 6582 440 5 1484 507 135 0 0 chrX 117872029 117872118 -48778178 - L1_Mus3 LINE L1 -7 6631 6543 5 1484 3444 89 14 0 chrX 117872118 117872623 -48777673 + MusHAL1 LINE L1 1568 2079 -633 5 1484 6185 106 17 16 chrX 117872890 117874308 -48775988 - Lx3A LINE L1 -408 6573 5164 5 1484 32505 84 9 13 chrX 117874865 117879495 -48770801 - L1Md_F2 LINE L1 -10 6572 1978 5 1484 228 35 0 0 chrX 117879495 117879524 -48770772 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1484 32505 115 23 20 chrX 117879524 117881173 -48769123 - L1Md_F2 LINE L1 -3906 1977 305 5 1484 43 20 0 0 chrX 117881420 117881470 -48768826 + AT_rich Low_complexity Low_complexity 1 50 0 5 1484 1471 289 38 8 chrX 117881998 117882396 -48767900 - Lx5 LINE L1 -53 6997 6588 5 1484 1645 274 62 109 chrX 117882911 117883881 -48766415 + RLTR22_Mur LTR ERVK 1 924 -924 5 1484 254 309 84 77 chrX 117884056 117884259 -48766037 + RLTR22_Mur LTR ERVK 1540 1767 -41 5 1484 23 0 0 0 chrX 117884294 117884317 -48765979 + AT_rich Low_complexity Low_complexity 1 23 0 5 1484 25 0 0 0 chrX 117885585 117885610 -48764686 + AT_rich Low_complexity Low_complexity 1 25 0 5 1484 1723 128 14 4 chrX 117885610 117885885 -48764411 - Lx2 LINE L1 -3 6994 6717 5 1484 36 0 0 0 chrX 117886226 117886262 -48764034 + AT_rich Low_complexity Low_complexity 1 36 0 5 1484 895 246 196 0 chrX 117886346 117886627 -48763669 - ORR1A1 LTR MaLR -8 338 3 5 1484 4516 59 0 8 chrX 117887843 117888428 -48761868 + L1Md_F2 LINE L1 5991 6570 -12 5 1484 1538 284 152 68 chrX 117889222 117890094 -48760202 - Lx6 LINE L1 -26 7434 6274 5 1484 4501 143 31 23 chrX 117890094 117890976 -48759320 - RMER17D LTR ERVK 0 889 1 5 1484 1812 246 61 54 chrX 117890977 117891861 -48758435 - Lx6 LINE L1 -1209 6251 5366 5 1484 186 43 0 0 chrX 117891861 117891884 -48758412 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 1484 614 296 66 60 chrX 117891884 117891940 -48758356 - L1M5 LINE L1 -764 5400 5352 5 1484 309 68 0 0 chrX 117891940 117891984 -48758312 + (TTTTG)n Simple_repeat Simple_repeat 1 44 0 5 1484 1085 88 0 13 chrX 117891984 117892134 -48758162 - B1_Mus1 SINE Alu 0 148 1 5 1484 3568 62 24 2 chrX 117892823 117893288 -48757008 - MT2C_Mm LTR ERVL 0 475 1 5 1484 23 0 0 0 chrX 117893609 117893632 -48756664 + AT_rich Low_complexity Low_complexity 1 23 0 5 1484 311 125 0 89 chrX 117893711 117893790 -48756506 - L1Md_F2 LINE L1 0 6582 6511 5 1484 200 128 26 0 chrX 117894425 117894464 -48755832 + (TAA)n Simple_repeat Simple_repeat 3 42 0 5 1484 896 162 124 0 chrX 117895901 117895976 -48754320 + Lx2 LINE L1 6790 6864 -133 5 1484 234 91 0 0 chrX 117895976 117896009 -48754287 + (TGAG)n Simple_repeat Simple_repeat 2 34 0 5 1484 896 162 124 0 chrX 117896009 117896118 -48754178 + Lx2 LINE L1 6865 6995 -2 5 1484 7016 83 21 2 chrX 117897018 117898420 -48751876 - L1Md_F2 LINE L1 -2 6580 5151 5 1484 677 43 11 0 chrX 117898934 117899027 -48751269 + (TATG)n Simple_repeat Simple_repeat 2 95 0 5 1484 1487 227 55 29 chrX 117899109 117899509 -48750787 - MTD LTR MaLR -12 407 1 5 1484 310 225 12 24 chrX 117900095 117900177 -48750119 - RMER5 LTR ERV1 -282 252 172 5 1484 657 275 55 28 chrX 117900176 117900393 -48749903 - RMER5 LTR ERV1 -311 223 1 5 1484 958 300 104 69 chrX 117900397 117900506 -48749790 - MTE-int LTR MaLR -620 960 854 5 1484 3111 81 7 11 chrX 117900506 117900941 -48749355 + L1Md_F2 LINE L1 6138 6570 -12 5 1484 958 300 104 69 chrX 117900941 117901077 -48749219 - MTE-int LTR MaLR -727 853 731 5 1484 4781 2 0 0 chrX 117901077 117901610 -48748686 + L1Md_A LINE L1 6050 6582 0 5 1484 958 300 104 69 chrX 117901610 117901871 -48748425 - MTE-int LTR MaLR -850 730 436 5 1484 438 176 153 13 chrX 117902503 117902653 -48747643 + Lx9 LINE L1 7466 7636 -8 5 1484 241 320 28 85 chrX 117902818 117902924 -48747372 - PB1D10 SINE Alu 0 117 18 5 1484 1446 129 0 0 chrX 117903039 117903256 -48747040 - Lx2 LINE L1 -6 6991 6775 5 1484 3233 146 117 7 chrX 117903256 117903946 -48746350 - Lx2 LINE L1 -353 6644 5879 5 1484 23 0 0 0 chrX 117904269 117904292 -48746004 + AT_rich Low_complexity Low_complexity 1 23 0 5 1484 306 125 61 30 chrX 117904921 117904987 -48745309 + L1_Rod LINE L1 5158 5225 -622 5 1484 31 58 0 0 chrX 117906127 117906179 -48744117 + AT_rich Low_complexity Low_complexity 1 52 0 5 1484 412 62 15 15 chrX 117906364 117906429 -48743867 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 1484 523 288 35 109 chrX 117906494 117906678 -48743618 - ORR1D1 LTR MaLR -164 214 35 5 1484 1055 105 6 6 chrX 117906678 117906850 -48743446 + L1_Mus4 LINE L1 6458 6629 -7 5 1484 451 288 35 109 chrX 117906850 117906895 -48743401 - ORR1D1 LTR MaLR -344 34 2 5 1484 494 349 99 69 chrX 117906898 117907505 -48742791 - Lx8 LINE L1 -340 7133 6509 5 1484 413 34 0 33 chrX 117907548 117907608 -48742688 + (TTTTA)n Simple_repeat Simple_repeat 3 60 0 5 1484 5393 124 2 2 chrX 117907608 117908418 -48741878 - Lx LINE L1 -28 6626 5817 5 1484 2746 144 9 0 chrX 117908414 117908837 -48741459 - Lx2 LINE L1 -351 6646 6220 5 1484 293 73 0 52 chrX 117909895 117909953 -48740343 + (T)n Simple_repeat Simple_repeat 1 55 0 5 1484 415 252 112 37 chrX 117909974 117910135 -48740161 - RMER15 LTR ERVL -381 194 22 5 1484 24 32 0 0 chrX 117910269 117910300 -48739996 + AT_rich Low_complexity Low_complexity 1 31 0 5 1484 6471 99 72 2 chrX 117910305 117911330 -48738966 - L1_Mus3 LINE L1 -6 6632 5537 5 1484 21 57 0 0 chrX 117911555 117911590 -48738706 + AT_rich Low_complexity Low_complexity 1 35 0 5 1484 682 324 0 0 chrX 117911592 117911808 -48738488 - B3 SINE B2 0 216 1 5 1484 22 94 0 0 chrX 117911835 117911899 -48738397 + AT_rich Low_complexity Low_complexity 1 64 0 5 1484 23 0 0 0 chrX 117913016 117913039 -48737257 + AT_rich Low_complexity Low_complexity 1 23 0 5 1484 30 0 0 0 chrX 117913514 117913544 -48736752 + AT_rich Low_complexity Low_complexity 1 30 0 5 1484 24 0 0 0 chrX 117913719 117913743 -48736553 + AT_rich Low_complexity Low_complexity 1 24 0 5 1484 5069 152 68 3 chrX 117913944 117915029 -48735267 - Lx3C LINE L1 -920 6056 4922 5 1484 3225 160 54 2 chrX 117915024 117915639 -48734657 + Lx3C LINE L1 4247 4893 -984 5 1484 2116 85 10 7 chrX 117916470 117916767 -48733529 - L1Md_F2 LINE L1 -10 6572 6275 5 1484 22 0 0 0 chrX 117917234 117917256 -48733040 + AT_rich Low_complexity Low_complexity 1 22 0 5 1484 5500 66 3 4 chrX 117918212 117918928 -48731368 - L1Md_F2 LINE L1 -10 6572 5858 5 1484 31030 94 6 12 chrX 117918937 117924042 -48726254 - L1Md_F2 LINE L1 -385 5498 446 5 1484 21 57 0 0 chrX 117924069 117924104 -48726192 + AT_rich Low_complexity Low_complexity 1 35 0 5 1484 201 265 0 0 chrX 117926340 117926389 -48723907 + T-rich Low_complexity Low_complexity 1 49 0 5 1484 21 0 0 0 chrX 117926583 117926604 -48723692 + AT_rich Low_complexity Low_complexity 1 21 0 5 1484 22 0 0 0 chrX 117926705 117926727 -48723569 + AT_rich Low_complexity Low_complexity 1 22 0 5 1484 5852 202 80 13 chrX 117926727 117928464 -48721832 - Lx3C LINE L1 -1 6975 5116 5 1484 2997 60 7 20 chrX 117929196 117929601 -48720695 - MTB LTR MaLR 0 400 1 5 1484 8443 60 6 1 chrX 117929601 117930694 -48719602 - MTB-int LTR MaLR 0 1098 1 5 1484 2870 76 10 10 chrX 117930694 117931094 -48719202 - MTB LTR MaLR 0 400 1 5 1484 22 0 0 0 chrX 117931767 117931789 -48718507 + AT_rich Low_complexity Low_complexity 1 22 0 5 1484 513 307 73 8 chrX 117931927 117932186 -48718110 - MER33 DNA MER1_type -27 297 22 5 1484 609 14 0 0 chrX 117932368 117932438 -48717858 + (TC)n Simple_repeat Simple_repeat 1 70 0 5 1484 412 311 0 9 chrX 117932492 117932599 -48717697 + RSINE1 SINE B4 36 141 -24 5 1484 2459 131 43 2 chrX 117932688 117933086 -48717210 - Lx LINE L1 -7 6647 6234 5 1484 454 123 0 16 chrX 117933086 117933164 -48717132 + Lx LINE L1 6156 6231 -335 5 1484 356 373 13 32 chrX 117933872 117934030 -48716266 + RSINE1 SINE B4 11 165 0 5 1484 32 81 0 0 chrX 117934051 117934125 -48716171 + AT_rich Low_complexity Low_complexity 1 74 0 5 1484 4943 136 6 8 chrX 117934145 117934932 -48715364 - Lx LINE L1 -2 6652 5867 5 1484 453 285 17 17 chrX 117934940 117935115 -48715181 - Lx7 LINE L1 0 7696 7522 5 1484 21 36 0 0 chrX 117935115 117935143 -48715153 + AT_rich Low_complexity Low_complexity 1 28 0 6 1484 378 314 86 6 chrX 117936070 117936384 -48713912 - L1MA4A LINE L1 0 6300 5962 6 1484 1051 284 44 3 chrX 117938073 117938436 -48711860 - L1MA4A LINE L1 -429 5874 5497 6 1484 1374 314 31 38 chrX 117938473 117939025 -48711271 - Lx8 LINE L1 -3 7470 6923 6 1484 658 222 138 6 chrX 117939046 117939227 -48711069 + Lx8 LINE L1 6703 6907 -566 6 1484 292 296 73 27 chrX 117939235 117939405 -48710891 - L1MA4A LINE L1 -830 5470 5295 6 1484 398 251 133 53 chrX 117939587 117939904 -48710392 - MTC-int LTR MaLR -172 1086 681 6 1484 4554 81 2 5 chrX 117940158 117940788 -48709508 - L1_Mus1 LINE L1 -1 6566 5939 6 1484 531 302 15 68 chrX 117940913 117941119 -48709177 - MTC-int LTR MaLR -891 367 173 6 1484 971 69 0 0 chrX 117941869 117942000 -48708296 - L1_Mus1 LINE L1 0 6567 6437 6 1484 275 243 40 0 chrX 117942082 117942156 -48708140 - L1MA4A LINE L1 -1596 4547 4471 6 1484 342 0 0 0 chrX 117942207 117942245 -48708051 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 6 1484 723 21 0 50 chrX 117942248 117942348 -48707948 - B1_Mm SINE Alu -12 135 41 6 1484 358 313 40 48 chrX 117942362 117942668 -48707628 - Lx9 LINE L1 0 7473 7169 6 1484 280 363 7 22 chrX 117942676 117942814 -48707482 + Lx9 LINE L1 7163 7298 -346 6 1484 1461 160 7 7 chrX 117943006 117943277 -48707019 - Lx3A LINE L1 -6 6975 6705 6 1484 1202 111 0 0 chrX 117943277 117943449 -48706847 + Lx3A LINE L1 6518 6689 -292 6 1484 385 50 16 16 chrX 117943915 117943976 -48706320 + (TC)n Simple_repeat Simple_repeat 2 62 0 6 1484 21 0 0 0 chrX 117944303 117944324 -48705972 + AT_rich Low_complexity Low_complexity 1 21 0 6 1484 201 39 0 0 chrX 117944457 117944483 -48705813 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 6 1484 28 0 0 0 chrX 117944639 117944667 -48705629 + AT_rich Low_complexity Low_complexity 1 28 0 6 1484 321 68 0 0 chrX 117944756 117944800 -48705496 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1484 1364 57 40 0 chrX 117945399 117945575 -48704721 + B2_Mm2 SINE B2 4 186 -9 6 1484 36639 6 0 0 chrX 117945659 117949844 -48700452 + L1Md_A LINE L1 1402 5586 -297 6 1484 8918 4 0 0 chrX 117949844 117950840 -48699456 + L1Md_A LINE L1 5587 6582 0 6 1484 886 62 0 0 chrX 117950994 117951106 -48699190 + B1_Mm SINE Alu 26 137 -10 6 1484 183 80 0 0 chrX 117951106 117951131 -48699165 + (TA)n Simple_repeat Simple_repeat 1 25 0 6 1484 1132 48 14 0 chrX 117951428 117951574 -48698722 - B1_Mus1 SINE Alu 0 148 1 6 1484 3687 177 71 9 chrX 117951826 117952612 -48697684 - L1_Mur2 LINE L1 -2110 3767 2933 6 1484 3607 72 91 17 chrX 117953130 117953655 -48696641 - LTRIS2 LTR ERV1 0 564 1 6 1484 351 65 0 0 chrX 117953890 117953936 -48696360 + (GA)n Simple_repeat Simple_repeat 1 46 0 6 1484 485 368 0 0 chrX 117954068 117954204 -48696092 - B3 SINE B2 -80 136 1 6 1484 310 197 14 40 chrX 117954636 117954710 -48695586 - L1MEg LINE L1 -4144 1940 1869 6 1484 1543 228 55 50 chrX 117955309 117955747 -48694549 - RMER10A LTR ERVL 0 442 3 6 1484 498 161 0 0 chrX 117956740 117956833 -48693463 + (TA)n Simple_repeat Simple_repeat 2 94 0 6 1484 765 33 0 0 chrX 117957818 117957910 -48692386 + (TCC)n Simple_repeat Simple_repeat 3 94 0 6 1484 186 370 41 0 chrX 117958145 117958218 -48692078 - MIR SINE MIR -135 127 52 6 1484 505 293 177 18 chrX 117959145 117959431 -48690865 - RLTR26 LTR ERVK -98 529 176 6 1484 820 256 90 5 chrX 117959698 117959910 -48690386 - MTD LTR MaLR -44 375 146 6 1484 264 59 0 0 chrX 117959959 117959993 -48690303 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1484 234 62 0 0 chrX 117960232 117960264 -48690032 + (TAA)n Simple_repeat Simple_repeat 2 33 0 6 1484 545 292 8 152 chrX 117960752 117960848 -48689448 - Lx9 LINE L1 -161 7483 7394 6 1484 1079 95 0 7 chrX 117960848 117960996 -48689300 + B1_Mus1 SINE Alu 2 148 0 6 1484 545 292 8 152 chrX 117960996 117961262 -48689034 - Lx9 LINE L1 -251 7393 7173 6 1484 23 0 0 0 chrX 117961266 117961289 -48689007 + AT_rich Low_complexity Low_complexity 1 23 0 6 1484 366 80 0 0 chrX 117961969 117962019 -48688277 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 6 1484 4709 193 72 13 chrX 117962034 117963056 -48687240 - Lx3B LINE L1 -109 6864 5782 6 1484 293 309 0 8 chrX 117963268 117963392 -48686904 + (TA)n Simple_repeat Simple_repeat 2 124 0 6 1484 24 32 0 0 chrX 117963925 117963956 -48686340 + AT_rich Low_complexity Low_complexity 1 31 0 6 1484 243 190 0 7 chrX 117963990 117964046 -48686250 - Lx3B LINE L1 -4 6972 6919 6 1484 362 115 0 16 chrX 117964296 117964358 -48685938 + (TCC)n Simple_repeat Simple_repeat 3 63 0 6 1484 23 0 0 0 chrX 117964546 117964569 -48685727 + AT_rich Low_complexity Low_complexity 1 23 0 6 1484 24 0 0 0 chrX 117964743 117964767 -48685529 + AT_rich Low_complexity Low_complexity 1 24 0 6 1485 423 320 0 10 chrX 117965447 117965551 -48684745 - MTEb LTR MaLR -117 262 160 6 1485 531 0 0 0 chrX 117967253 117967312 -48682984 + (TA)n Simple_repeat Simple_repeat 2 60 0 6 1485 306 305 52 21 chrX 117967606 117967703 -48682593 + RSINE1 SINE B4 14 113 -52 6 1485 318 50 0 0 chrX 117967706 117967746 -48682550 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1485 334 294 67 20 chrX 117970156 117970305 -48679991 + MIR SINE MIR 84 239 -23 6 1485 9445 97 71 25 chrX 117971058 117973037 -48677259 + L1_Mus2 LINE L1 4483 6558 -8 6 1485 245 224 169 13 chrX 117973037 117973051 -48677245 + MT2B LTR ERVL 152 177 -424 6 1485 447 52 288 0 chrX 117973051 117973140 -48677156 + B1_Mm SINE Alu 1 117 0 6 1485 282 56 0 0 chrX 117973200 117973236 -48677060 + (TTTC)n Simple_repeat Simple_repeat 3 38 0 6 1485 1099 88 0 0 chrX 117973236 117973384 -48676912 - B1_Mus1 SINE Alu 0 148 1 6 1485 2281 49 3 0 chrX 117974992 117975278 -48675018 + L1Md_A LINE L1 6296 6582 0 6 1485 1550 156 257 14 chrX 117975366 117975786 -48674510 - RLTR11A2 LTR ERVK -2 525 4 6 1485 4757 169 60 3 chrX 117975911 117976916 -48673380 + L1_Mus3 LINE L1 5547 6633 -5 6 1485 410 311 122 0 chrX 117977301 117977481 -48672815 + B3 SINE B2 1 202 -14 6 1485 1480 322 60 23 chrX 117979936 117980622 -48669674 - Lx8 LINE L1 -503 6970 6260 6 1485 602 421 122 23 chrX 117981163 117981761 -48668535 - MTE-int LTR MaLR -79 1501 845 6 1485 1356 260 47 47 chrX 117981938 117982466 -48667830 - Lx9 LINE L1 -1 7643 7116 6 1485 23 54 0 0 chrX 117986090 117986127 -48664169 + AT_rich Low_complexity Low_complexity 1 37 0 6 1485 190 211 19 37 chrX 117987167 117987221 -48663075 + MIRb SINE MIR 146 198 -70 6 1485 21 0 0 0 chrX 117987751 117987772 -48662524 + AT_rich Low_complexity Low_complexity 1 21 0 6 1485 261 57 0 0 chrX 117988291 117988326 -48661970 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 6 1485 417 275 18 9 chrX 117988349 117988459 -48661837 + LTR69 LTR ERVL 446 556 -32 6 1485 265 241 48 60 chrX 117989080 117989164 -48661132 - PB1D9 SINE Alu -25 95 13 6 1485 1956 81 0 0 chrX 117989515 117989773 -48660523 + L1_Mus2 LINE L1 6307 6564 -2 6 1485 7324 35 0 0 chrX 117990237 117991112 -48659184 - L1Md_T LINE L1 0 6582 5708 6 1485 21 36 0 0 chrX 117991437 117991465 -48658831 + AT_rich Low_complexity Low_complexity 1 28 0 6 1485 4754 48 8 21 chrX 117991567 117992199 -48658097 - L1Md_F2 LINE L1 0 6582 5959 6 1485 452 345 40 86 chrX 117992397 117992724 -48657572 + RLTR25B LTR ERVK 1 312 -716 6 1485 307 82 0 0 chrX 117993586 117993633 -48656663 + Lx3C LINE L1 5730 5782 -1194 6 1485 516 277 83 147 chrX 117993819 117993923 -48656373 + B4 SINE B4 11 186 -106 6 1485 1023 73 0 0 chrX 117993923 117994059 -48656237 + B1_Mus2 SINE Alu 12 147 0 6 1485 516 277 83 147 chrX 117994059 117994119 -48656177 + B4 SINE B4 187 291 -1 6 1485 462 18 0 0 chrX 117994135 117994190 -48656106 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1485 306 0 0 0 chrX 117994190 117994223 -48656073 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 1485 2631 133 51 2 chrX 117994223 117994654 -48655642 + Lx2A LINE L1 6554 7005 -3 6 1485 201 171 0 0 chrX 117994716 117994751 -48655545 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 6 1485 21 36 0 0 chrX 117995835 117995863 -48654433 + AT_rich Low_complexity Low_complexity 1 28 0 6 1485 26 50 0 0 chrX 117996186 117996226 -48654070 + AT_rich Low_complexity Low_complexity 1 40 0 6 1485 21 0 0 0 chrX 117996682 117996703 -48653593 + AT_rich Low_complexity Low_complexity 1 21 0 6 1485 459 0 0 0 chrX 117996795 117996846 -48653450 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 1485 210 71 0 0 chrX 117996909 117996937 -48653359 + (GA)n Simple_repeat Simple_repeat 1 28 0 6 1485 24 0 0 0 chrX 117997864 117997888 -48652408 + AT_rich Low_complexity Low_complexity 1 24 0 6 1485 5917 103 3 3 chrX 117998257 117999120 -48651176 - L1_Mus3 LINE L1 -1 6637 5775 6 1485 40 73 0 0 chrX 117999161 117999243 -48651053 + AT_rich Low_complexity Low_complexity 1 82 0 6 1485 818 246 34 23 chrX 117999317 117999350 -48650946 - L1VL4 LINE L1 -5416 1106 1071 6 1485 3292 64 0 0 chrX 117999350 117999772 -48650524 - L1_Mus2 LINE L1 -2 6564 6143 6 1485 1301 160 18 0 chrX 117999772 118000000 -48650296 - L1VL4 LINE L1 -5474 1186 842 6 1485 1281 214 110 22 chrX 118000000 118000363 -48649933 - L1Md_F LINE L1 -5663 856 462 1 1485 881 254 32 85 chrX 118000362 118000701 -48649595 - L1VL1 LINE L1 -5928 490 2 2 1485 242 143 20 0 chrX 118002222 118002271 -48648025 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1485 204 264 0 36 chrX 118002561 118002671 -48647625 + (TA)n Simple_repeat Simple_repeat 1 106 0 4 1485 371 98 16 0 chrX 118003016 118003077 -48647219 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 1485 328 281 176 39 chrX 118003469 118003491 -48646805 - Lx4B LINE L1 0 7000 6980 6 1485 4048 52 4 0 chrX 118003491 118003995 -48646301 + L1Md_F2 LINE L1 6077 6582 0 7 1485 4833 213 55 5 chrX 118003995 118005016 -48645280 - Lx4B LINE L1 -17 7041 5977 6 1485 267 328 70 9 chrX 118005172 118005286 -48645010 + MER31B LTR ERV1 44 164 -302 8 1485 24 0 0 0 chrX 118005517 118005541 -48644755 + AT_rich Low_complexity Low_complexity 1 24 0 9 1485 350 301 139 14 chrX 118005775 118005984 -48644312 + L1M4 LINE L1 2246 2480 -3666 1 1485 216 0 0 0 chrX 118006137 118006161 -48644135 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1485 274 304 31 39 chrX 118006513 118006643 -48643653 - Lx6 LINE L1 -29 7431 7303 1 1485 305 371 7 67 chrX 118006687 118006837 -48643459 + RSINE1 SINE B4 4 144 -21 1 1485 30 0 0 0 chrX 118006854 118006884 -48643412 + AT_rich Low_complexity Low_complexity 1 30 0 1 1485 1056 311 27 3 chrX 118007053 118007388 -48642908 - Lx6 LINE L1 -711 6749 6407 1 1485 3788 188 24 11 chrX 118007401 118008193 -48642103 - L1_Mur3 LINE L1 -737 5143 4342 1 1485 1151 74 0 0 chrX 118008238 118008386 -48641910 + B1_Mus1 SINE Alu 1 148 0 1 1485 456 297 34 55 chrX 118008613 118008759 -48641537 + B3A SINE B2 40 182 -16 1 1485 399 89 0 0 chrX 118008766 118008822 -48641474 + (GA)n Simple_repeat Simple_repeat 2 57 0 1 1485 7670 77 20 3 chrX 118008926 118009932 -48640364 - RLTR13D5 LTR ERVK 0 1023 1 1 1485 3060 56 8 8 chrX 118010400 118010793 -48639503 - MTA_Mm LTR MaLR 0 396 4 2 1485 24 0 0 0 chrX 118012261 118012285 -48638011 + AT_rich Low_complexity Low_complexity 1 24 0 2 1485 22 0 0 0 chrX 118012483 118012505 -48637791 + AT_rich Low_complexity Low_complexity 1 22 0 2 1485 1259 75 6 0 chrX 118012514 118012687 -48637609 + L1_Mus1 LINE L1 6394 6567 0 2 1485 24 77 0 0 chrX 118012956 118013008 -48637288 + AT_rich Low_complexity Low_complexity 1 52 0 2 1485 22 56 0 0 chrX 118013104 118013140 -48637156 + AT_rich Low_complexity Low_complexity 1 36 0 2 1485 231 133 0 0 chrX 118013242 118013287 -48637009 + (CAT)n Simple_repeat Simple_repeat 3 47 0 2 1485 183 80 0 0 chrX 118013329 118013354 -48636942 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 2 1485 5450 231 75 36 chrX 118013427 118014331 -48635965 - Lx5 LINE L1 -5 7045 6145 2 1485 378 0 0 0 chrX 118014331 118014373 -48635923 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1485 5731 193 54 13 chrX 118014373 118015780 -48634516 - Lx5 LINE L1 -906 6144 4662 2 1485 216 0 0 0 chrX 118015780 118015804 -48634492 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 1485 5731 185 50 8 chrX 118015804 118015830 -48634466 - Lx5 LINE L1 -1216 4661 4636 2 1485 1407 302 23 32 chrX 118015952 118016482 -48633814 - Lx9 LINE L1 -496 7148 6624 3 1485 604 339 86 41 chrX 118016501 118016793 -48633503 - MTE2a LTR MaLR 0 379 75 3 1485 239 177 65 0 chrX 118016927 118016989 -48633307 + L1M4b LINE L1 2295 2360 -4974 3 1485 297 369 106 55 chrX 118017314 118017532 -48632764 - B4A SINE B4 -63 229 1 3 1485 32 81 0 0 chrX 118017629 118017703 -48632593 + AT_rich Low_complexity Low_complexity 1 74 0 3 1485 219 366 24 0 chrX 118018125 118018207 -48632089 + B4A SINE B4 6 89 -203 3 1485 225 146 0 0 chrX 118018222 118018270 -48632026 + (A)n Simple_repeat Simple_repeat 1 48 0 3 1485 358 315 7 38 chrX 118018326 118018462 -48631834 + B4A SINE B4 118 249 -43 3 1485 28 0 0 0 chrX 118020114 118020142 -48630154 + AT_rich Low_complexity Low_complexity 1 28 0 3 1485 24 0 0 0 chrX 118020774 118020798 -48629498 + AT_rich Low_complexity Low_complexity 1 24 0 3 1485 217 289 0 0 chrX 118024281 118024333 -48625963 + ID4_ SINE ID 30 81 -2 4 1485 26310 92 104 37 chrX 118024537 118030301 -48619995 - L1Md_F2 LINE L1 0 6582 418 4 1485 23 0 0 0 chrX 118030405 118030428 -48619868 + AT_rich Low_complexity Low_complexity 1 23 0 4 1485 308 306 0 9 chrX 118031372 118031484 -48618812 - L1MC3 LINE L1 -245 7540 7430 4 1485 12054 112 7 7 chrX 118031579 118034260 -48616036 - L1_Mus3 LINE L1 -6 6632 3952 4 1485 1896 137 12 6 chrX 118034259 118034590 -48615706 + L1_Mur2 LINE L1 3605 3937 -1940 4 1485 5963 8 0 0 chrX 118034627 118035292 -48615004 - L1Md_T LINE L1 0 6582 5918 4 1485 369 0 0 0 chrX 118035700 118035741 -48614555 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 1485 468 237 0 40 chrX 118035741 118035842 -48614454 + B4A SINE B4 196 292 0 4 1485 2832 90 13 5 chrX 118036255 118036648 -48613648 - MTA_Mm LTR MaLR 0 396 1 4 1485 7188 107 30 5 chrX 118036648 118037719 -48612577 - MTA_Mm-int LTR MaLR 0 1098 1 4 1485 25 0 0 0 chrX 118037998 118038023 -48612273 + AT_rich Low_complexity Low_complexity 1 25 0 5 1485 554 338 19 39 chrX 118038259 118038465 -48611831 - ORR1D2 LTR MaLR -168 202 1 5 1485 603 309 61 29 chrX 118038465 118038844 -48611452 - ORR1D2-int LTR MaLR -53 1527 781 5 1485 432 211 0 59 chrX 118038836 118038937 -48611359 - ORR1D2-int LTR MaLR -1135 235 141 5 1485 679 366 59 35 chrX 118039013 118039353 -48610943 - ORR1E LTR MaLR -11 348 1 5 1485 2127 230 7 19 chrX 118039449 118039910 -48610386 - RMER19A LTR ERVK 0 737 283 5 1485 2276 228 66 34 chrX 118039913 118040504 -48609792 - RLTR17 LTR ERVK -82 610 1 5 1485 1348 215 67 16 chrX 118040504 118040811 -48609485 - RMER19A LTR ERVK -414 323 1 5 1485 3549 140 127 50 chrX 118040812 118041551 -48608745 - MurERV4_19-int LTR ERVK -1 5779 4984 5 1485 3695 139 5 0 chrX 118041555 118042122 -48608174 - MT2B2 LTR ERVL -14 570 1 5 1485 975 139 11 34 chrX 118042122 118042300 -48607996 - MurERV4_19-int LTR ERVK -792 4988 4815 5 1485 951 101 73 13 chrX 118042304 118042455 -48607841 - B2_Mm2 SINE B2 -35 160 1 5 1485 11532 173 15 12 chrX 118042455 118044669 -48605627 + L1_Mur2 LINE L1 3493 5714 -163 5 1485 434 202 0 0 chrX 118044669 118044748 -48605548 - MurERV4_19-int LTR ERVK -5700 80 2 5 1485 657 181 37 22 chrX 118044749 118044871 -48605425 - RMER19A LTR ERVK 0 737 614 5 1485 3013 101 34 80 chrX 118044871 118045484 -48604812 + RMER17D2 LTR ERVK 1 585 -224 5 1485 5963 153 10 3 chrX 118045484 118046499 -48603797 - L1_Mm LINE L1 -595 5288 4267 5 1485 3055 84 2 0 chrX 118046499 118046905 -48603391 + L1_Mus1 LINE L1 6161 6567 0 6 1485 1004 191 0 87 chrX 118046914 118047166 -48603130 + RMER6C LTR ERVK 454 683 -7 6 1485 268 391 16 26 chrX 118047383 118047572 -48602724 - MLT1A0 LTR MaLR -172 193 7 6 1485 1384 309 11 14 chrX 118047884 118048255 -48602041 - MTE2b LTR MaLR -9 370 1 6 1485 363 23 0 0 chrX 118048847 118048891 -48601405 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1485 623 269 14 0 chrX 118049159 118049304 -48600992 - B1_Mur2 SINE Alu 0 149 3 6 1485 3391 142 4 13 chrX 118049663 118050198 -48600098 - Lx3B LINE L1 -96 6877 6348 6 1485 479 40 50 20 chrX 118050200 118050301 -48599995 + (TTTTG)n Simple_repeat Simple_repeat 3 106 0 6 1485 351 0 0 0 chrX 118050302 118050341 -48599955 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 1485 1086 123 0 109 chrX 118050341 118050542 -48599754 - Lx3B LINE L1 -629 6344 6166 6 1485 13646 128 3 2 chrX 118050541 118052734 -48597562 - L1_Mm LINE L1 -2185 3698 1504 6 1485 1112 113 49 5 chrX 118052730 118052935 -48597361 - Lx3_Mus LINE L1 -773 6236 6023 7 1485 1755 138 21 0 chrX 118052941 118053224 -48597072 - Lx3_Mus LINE L1 -126 5760 5472 7 1485 11265 167 20 112 chrX 118053225 118054556 -48595740 - Lx3_Mus LINE L1 -1778 4108 2835 7 1485 1830 80 8 0 chrX 118054556 118054807 -48595489 + RMER17A LTR ERVK 1 253 -498 7 1485 11265 167 20 112 chrX 118054807 118054852 -48595444 - Lx3_Mus LINE L1 -1778 2834 2791 7 1485 3722 142 11 92 chrX 118054852 118055669 -48594627 + RMER17A LTR ERVK 1 751 0 7 1485 11265 167 20 112 chrX 118055669 118055799 -48594497 - Lx3_Mus LINE L1 -3096 2790 2661 7 1485 405 58 0 0 chrX 118055799 118055851 -48594445 + (TA)n Simple_repeat Simple_repeat 2 53 0 7 1485 11265 167 20 112 chrX 118055851 118057026 -48593270 - Lx3_Mus LINE L1 -3226 2660 1445 7 1485 1538 196 70 5 chrX 118057025 118057410 -48592886 - L1_Mur2 LINE L1 -3114 2763 2354 7 1485 866 149 137 0 chrX 118057410 118057570 -48592726 + RLTR13D6 LTR ERVK 1 182 -720 7 1485 3847 88 2 2 chrX 118057570 118058082 -48592214 - RLTR1B LTR ERV1 0 512 1 7 1485 4739 118 20 6 chrX 118058082 118058800 -48591496 + RLTR13D6 LTR ERVK 174 902 0 7 1485 4494 202 51 16 chrX 118058800 118060165 -48590131 - L1_Mur2 LINE L1 -3518 2359 915 7 1485 464 333 14 7 chrX 118060169 118060308 -48589988 + B1_Mur4 SINE Alu 11 150 0 7 1485 21 57 0 0 chrX 118060308 118060343 -48589953 + AT_rich Low_complexity Low_complexity 1 35 0 7 1485 278 325 51 78 chrX 118060665 118061296 -48589000 + L1MD LINE L1 4427 5040 -1106 7 1485 265 358 64 75 chrX 118061299 118061580 -48588716 + B4A SINE B4 1 278 -14 8 1485 205 394 88 5 chrX 118061785 118061979 -48588317 + L2 LINE L2 1473 1682 -1737 8 1485 3188 221 14 41 chrX 118061992 118062755 -48587541 + Lx5 LINE L1 6308 7050 0 8 1485 4985 125 22 11 chrX 118062953 118063739 -48586557 - Lx3_Mus LINE L1 0 7009 6216 8 1485 15829 120 35 75 chrX 118063740 118064371 -48585925 - L1_Mur1 LINE L1 -501 5385 4655 8 1485 1061 72 0 0 chrX 118064371 118064509 -48585787 - B1_Mm SINE Alu 0 147 10 8 1485 15829 120 35 75 chrX 118064509 118067252 -48583044 - L1_Mur1 LINE L1 -501 4654 1470 8 1485 6517 114 24 21 chrX 118067252 118068270 -48582026 - RLTR13D5 LTR ERVK 0 1023 3 8 1485 12057 173 137 28 chrX 118068270 118069199 -48581097 - L1_Mur1 LINE L1 -4408 1469 209 8 1485 215 150 0 24 chrX 118069959 118070000 -48580296 + T-rich Low_complexity Low_complexity 2 41 0 8 1485 956 189 22 16 chrX 118070008 118070191 -48580105 + RMER5 LTR ERV1 285 468 -66 8 1485 4499 159 17 3 chrX 118070195 118070915 -48579381 + RMER19A LTR ERVK 1 730 -7 8 1485 36155 30 0 0 chrX 118072782 118079267 -48571029 - L1Md_T LINE L1 0 6585 26 9 1485 23 33 0 0 chrX 118080020 118080050 -48570246 + AT_rich Low_complexity Low_complexity 1 30 0 9 1485 268 125 0 40 chrX 118080273 118080323 -48569973 - Lx4A LINE L1 -243 6815 6768 9 1485 2009 192 9 43 chrX 118080314 118080777 -48569519 + L1VL4 LINE L1 203 649 -5653 9 1485 415 156 39 0 chrX 118080817 118080894 -48569402 + RMER6C LTR ERVK 491 570 -120 9 1485 449 189 8 59 chrX 118080901 118081019 -48569277 - RMER6C LTR ERVK -104 586 475 9 1485 3164 33 5 48 chrX 118081562 118081976 -48568320 - MTA_Mm LTR MaLR 0 396 1 9 1485 868 368 41 21 chrX 118082170 118082681 -48567615 - Lx5 LINE L1 -18 7032 6512 9 1485 2220 22 94 0 chrX 118082750 118083017 -48567279 - RLTR10B LTR ERVK 0 292 1 9 1485 8571 147 20 13 chrX 118083216 118085654 -48564642 - L1_Mus2 LINE L1 0 6566 4103 9 1485 2798 174 3 32 chrX 118085652 118085872 -48564424 + L1_Mur2 LINE L1 3528 3739 -2138 1 1485 2889 83 5 10 chrX 118085872 118086274 -48564022 - MTB LTR MaLR 0 400 1 1 1485 2798 174 3 32 chrX 118086274 118086653 -48563643 + L1_Mur2 LINE L1 3740 4110 -1767 1 1485 21 0 0 0 chrX 118086777 118086798 -48563498 + AT_rich Low_complexity Low_complexity 1 21 0 1 1485 294 242 0 16 chrX 118087034 118087097 -48563199 - MLT1A1 LTR MaLR -332 76 15 1 1485 408 210 146 32 chrX 118087403 118087526 -48562770 + B1_Mur4 SINE Alu 1 137 -13 1 1485 804 121 0 0 chrX 118087584 118087716 -48562580 + (GAAA)n Simple_repeat Simple_repeat 4 135 0 1 1485 21 36 0 0 chrX 118088779 118088807 -48561489 + AT_rich Low_complexity Low_complexity 1 28 0 1 1485 493 342 129 21 chrX 118088932 118089219 -48561077 + ORR1E LTR MaLR 35 352 -7 1 1485 426 85 0 0 chrX 118089219 118089278 -48561018 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 1485 2725 6 4 198 chrX 118090267 118090722 -48559574 + IAPLTR1_Mm LTR ERVK 1 367 0 1 185 52204 26 16 11 chrX 118090722 118097161 -48553135 + IAPEz-int LTR ERVK 8 6481 0 1 1486 2725 6 4 198 chrX 118097161 118097616 -48552680 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1486 408 20 0 0 chrX 118097694 118097743 -48552553 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1486 254 50 25 0 chrX 118097798 118097838 -48552458 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 1486 3910 165 61 0 chrX 118098285 118099008 -48551288 - Lx2 LINE L1 -1 6996 6230 1 1486 698 313 76 22 chrX 118099026 118099343 -48550953 - Lx8 LINE L1 -336 7137 6804 1 1486 1029 103 7 0 chrX 118099354 118099500 -48550796 + B1_Mm SINE Alu 1 147 0 1 1486 318 267 41 97 chrX 118099556 118099701 -48550595 - Lx8 LINE L1 -950 6523 6387 1 1486 33232 71 4 5 chrX 118099985 118105942 -48544354 - L1Md_F3 LINE L1 -17 6567 625 1 1486 1040 201 124 16 chrX 118106049 118106453 -48543843 - L1_Mur2 LINE L1 -4517 1360 892 1 1486 1282 284 111 32 chrX 118107034 118107718 -48542578 + Lx9 LINE L1 6886 7623 -21 1 1486 23 78 0 0 chrX 118107721 118107772 -48542524 + AT_rich Low_complexity Low_complexity 1 51 0 1 1486 470 342 84 59 chrX 118108366 118108686 -48541610 + MTD LTR MaLR 78 405 -14 1 1486 1021 314 81 52 chrX 118108699 118109579 -48540717 + MTD-int LTR MaLR 1 1219 -361 1 1486 661 247 73 34 chrX 118109580 118109798 -48540498 + RMER6C LTR ERVK 1 272 -448 1 1486 11815 186 29 25 chrX 118109820 118110721 -48539575 - L1_Mur1 LINE L1 -986 4900 3990 1 1486 672 13 0 0 chrX 118110721 118110798 -48539498 + (TC)n Simple_repeat Simple_repeat 2 78 0 1 1486 11815 186 29 29 chrX 118110798 118112700 -48537596 - L1_Mur1 LINE L1 -1897 3989 2087 1 1486 3006 182 33 15 chrX 118112703 118113305 -48536991 - Lx LINE L1 0 6654 6042 1 1486 1896 129 0 33 chrX 118113305 118113634 -48536662 + Lx LINE L1 5725 6042 -612 1 1486 25 0 0 0 chrX 118113652 118113677 -48536619 + AT_rich Low_complexity Low_complexity 1 25 0 1 1486 28912 136 12 17 chrX 118113680 118119902 -48530394 - L1_Mus2 LINE L1 -1 6565 393 1 1486 5326 128 15 4 chrX 118119901 118121393 -48528903 - L1VL4 LINE L1 -1838 1721 210 1 1486 1244 74 24 0 chrX 118121409 118121751 -48528545 + (TTTCC)n Simple_repeat Simple_repeat 1 350 0 1 1486 306 0 0 0 chrX 118121751 118121785 -48528511 + (TTTC)n Simple_repeat Simple_repeat 4 37 0 1 1486 1005 108 0 20 chrX 118121789 118121940 -48528356 - B1_Mus1 SINE Alu 0 148 1 1 1486 1584 210 225 16 chrX 118121940 118122491 -48527805 - L1VL2 LINE L1 -5510 825 158 1 1486 1075 281 51 19 chrX 118122511 118122940 -48527356 - L1_Mur3 LINE L1 -796 5347 4898 1 1486 1353 296 51 20 chrX 118122994 118123504 -48526792 + Lx8 LINE L1 6385 6910 -563 1 1486 704 330 86 33 chrX 118123556 118124010 -48526286 + Lx8 LINE L1 6992 7469 -4 1 1486 782 252 119 18 chrX 118124107 118124201 -48526095 - Lx9 LINE L1 -7 7637 7522 1 1486 198 0 0 0 chrX 118124201 118124223 -48526073 + (TAGA)n Simple_repeat Simple_repeat 1 22 0 1 1486 782 252 119 18 chrX 118124223 118124463 -48525833 - Lx9 LINE L1 -123 7521 7269 1 1486 381 308 120 64 chrX 118124685 118124935 -48525361 + MTEa LTR MaLR 16 279 -100 1 1486 351 349 74 68 chrX 118125080 118125385 -48524911 + MLT1A1 LTR MaLR 67 406 -2 1 1486 897 312 37 27 chrX 118125932 118126228 -48524068 + RMER1B Other Other 44 342 -724 1 1486 248 220 66 33 chrX 118126598 118126659 -48523637 + RMER1B Other Other 324 386 -680 1 1486 350 363 181 0 chrX 118126655 118126859 -48523437 + RMER1A Other Other 1 241 -789 1 1486 2682 269 195 6 chrX 118126873 118127734 -48522562 + RMER1A Other Other 1 1024 -6 1 1486 296 235 0 34 chrX 118127844 118127932 -48522364 + T-rich Low_complexity Low_complexity 1 85 0 1 1486 1323 188 84 3 chrX 118127954 118128253 -48522043 + RMER17A-int LTR ERVK 1404 1726 -2 1 1486 3797 213 43 57 chrX 118128255 118129226 -48521070 + RMER17B LTR ERVK 1 958 0 1 1486 27 0 0 0 chrX 118129474 118129501 -48520795 + AT_rich Low_complexity Low_complexity 1 27 0 1 1486 296 344 38 19 chrX 118129577 118129737 -48520559 + MLT1B LTR MaLR 18 180 -210 1 1486 324 349 83 16 chrX 118129724 118129966 -48520330 + MLT1B LTR MaLR 109 366 -24 1 1486 331 344 30 112 chrX 118130603 118130996 -48519300 - L1ME3A LINE L1 -183 5990 5630 1 1486 227 349 83 45 chrX 118131363 118131495 -48518801 + ID_B1 SINE B4 80 216 -8 1 1486 427 310 86 0 chrX 118131385 118131501 -48518795 + B1_Mur1 SINE Alu 22 147 -2 1 1486 408 20 0 0 chrX 118131691 118131740 -48518556 + (CATA)n Simple_repeat Simple_repeat 4 52 0 1 1486 22 0 0 0 chrX 118132117 118132139 -48518157 + AT_rich Low_complexity Low_complexity 1 22 0 1 1486 257 286 70 18 chrX 118132139 118132253 -48518043 - LTR65 LTR ERV1 -508 161 42 1 1486 448 238 161 7 chrX 118133044 118133195 -48517101 - MTE2a LTR MaLR -2 417 205 1 1486 3976 95 4 4 chrX 118133268 118133827 -48516469 - L1Md_F2 LINE L1 -19 6563 6005 1 1486 32049 99 38 11 chrX 118133827 118139648 -48510648 - L1Md_F3 LINE L1 -4 6580 558 1 1486 2949 81 0 0 chrX 118139645 118140040 -48510256 - L1Md_F2 LINE L1 -564 6018 5624 1 1486 1002 312 3 22 chrX 118140066 118140381 -48509915 - Lx6 LINE L1 -26 7434 7126 1 1486 267 307 114 0 chrX 118140424 118140512 -48509784 + Lx6 LINE L1 7006 7103 -357 1 1486 311 321 84 4 chrX 118140515 118140661 -48509635 - MTE2a LTR MaLR -187 192 39 1 1486 289 309 79 29 chrX 118141091 118141231 -48509065 + LTR81B LTR ERV1? 171 317 -1033 1 1486 716 33 11 0 chrX 118142025 118142116 -48508180 + (TTC)n Simple_repeat Simple_repeat 1 92 0 1 1486 1896 194 26 89 chrX 118142568 118143060 -48507236 + RMER6B LTR ERVK 1 461 0 1 1486 2611 211 148 11 chrX 118143584 118144226 -48506070 - RMER19A LTR ERVK -7 730 1 1 1486 29 0 0 0 chrX 118145019 118145048 -48505248 + AT_rich Low_complexity Low_complexity 1 29 0 1 1486 22 35 0 0 chrX 118145173 118145202 -48505094 + AT_rich Low_complexity Low_complexity 1 29 0 1 1486 4397 85 2 0 chrX 118145242 118145832 -48504464 - L1Md_F2 LINE L1 -493 5390 4800 1 1486 1833 63 0 0 chrX 118145827 118146050 -48504246 + L1Md_F2 LINE L1 5364 5586 -297 1 1486 7465 75 8 4 chrX 118146051 118147029 -48503267 + L1Md_F2 LINE L1 5588 6569 -13 1 1486 542 241 12 0 chrX 118147093 118147263 -48503033 + (TATATG)n Simple_repeat Simple_repeat 2 173 0 1 1486 21 0 0 0 chrX 118147765 118147786 -48502510 + AT_rich Low_complexity Low_complexity 1 21 0 1 1486 21 0 0 0 chrX 118147994 118148015 -48502281 + AT_rich Low_complexity Low_complexity 1 21 0 1 1486 252 111 0 0 chrX 118148706 118148751 -48501545 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 1 1486 4207 88 0 35 chrX 118148795 118149398 -48500898 - L1Md_F2 LINE L1 -8 6574 5993 1 1486 257 232 0 14 chrX 118149693 118149763 -48500533 + GA-rich Low_complexity Low_complexity 2 70 0 1 1486 201 200 20 0 chrX 118150287 118150337 -48499959 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 1486 587 275 18 78 chrX 118151656 118151873 -48498423 - RLTR25B LTR ERVK 0 1028 825 1 1486 3114 185 192 51 chrX 118152107 118152470 -48497826 - RLTR25A LTR ERVK -148 955 529 1 1486 234 0 0 0 chrX 118152470 118152496 -48497800 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 1 1486 3114 185 192 51 chrX 118152496 118152969 -48497327 - RLTR25A LTR ERVK -575 528 1 1 1486 26 64 0 0 chrX 118152994 118153041 -48497255 + AT_rich Low_complexity Low_complexity 1 47 0 1 1486 189 0 0 0 chrX 118153579 118153600 -48496696 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1486 588 66 28 9 chrX 118153661 118153768 -48496528 + (TTTTG)n Simple_repeat Simple_repeat 1 109 0 1 1486 1045 95 0 26 chrX 118153768 118153919 -48496377 - B1_Mm SINE Alu 0 147 1 1 1486 354 331 4 39 chrX 118154109 118154203 -48496093 + RMER17C LTR ERVK 1 95 -315 1 1486 1476 34 0 0 chrX 118154203 118154381 -48495915 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1 1486 354 331 4 39 chrX 118154381 118154541 -48495755 + RMER17C LTR ERVK 96 246 -164 1 1486 560 248 123 71 chrX 118154512 118154820 -48495476 + RMER17C LTR ERVK 87 410 0 1 1486 270 266 62 12 chrX 118154861 118154941 -48495355 - RLTR4_MM-int LTR ERV1 -151 5166 5083 1 1486 307 314 19 25 chrX 118154888 118155048 -48495248 - RNERVK23-int LTR ERVK -559 7658 7500 1 1486 297 0 0 0 chrX 118155085 118155118 -48495178 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1 1486 1585 131 218 98 chrX 118155178 118155577 -48494719 + LTRIS5 LTR ERV1 1 447 0 1 1486 634 289 72 13 chrX 118156052 118156388 -48493908 - RLTR4_MM-int LTR ERV1 -2425 5176 4923 1 1486 339 25 0 0 chrX 118156447 118156487 -48493809 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1486 445 272 69 34 chrX 118156833 118157008 -48493288 + RLTR41 LTR ERV1 266 446 0 1 1486 375 342 63 18 chrX 118157015 118157238 -48493058 - RLTR4_MM-int LTR ERV1 -1998 3065 2833 1 1486 358 342 78 58 chrX 118157842 118158423 -48491873 - RLTR4_MM-int LTR ERV1 -5802 1804 1279 1 1486 479 333 0 0 chrX 118158853 118158994 -48491302 - B1F2 SINE Alu 0 149 9 1 1486 578 317 92 24 chrX 118159465 118159967 -48490329 - L1MA4A LINE L1 -386 5917 5351 1 1486 1778 266 154 27 chrX 118159961 118160552 -48489744 - Lx6 LINE L1 -27 7433 6768 1 1486 1222 271 76 37 chrX 118160560 118160970 -48489326 + Lx5 LINE L1 6209 6634 -416 1 1486 480 77 0 0 chrX 118161140 118161205 -48489091 + (TTA)n Simple_repeat Simple_repeat 2 66 0 1 1486 610 261 163 7 chrX 118161717 118161961 -48488335 + L1_Rod LINE L1 2211 2468 -3412 1 1486 286 95 15 31 chrX 118161961 118162026 -48488270 + (CAAAAA)n Simple_repeat Simple_repeat 3 66 0 1 1486 1311 264 62 24 chrX 118162029 118162577 -48487719 + L1_Rod LINE L1 2452 3020 -2827 1 1486 2455 226 90 20 chrX 118162843 118163497 -48486799 + L1Md_F LINE L1 288 985 -5534 1 1486 600 75 85 0 chrX 118163497 118163603 -48486693 - L1Md_F3 LINE L1 0 6584 6470 1 1486 2455 226 90 20 chrX 118163603 118163639 -48486657 + L1Md_F LINE L1 986 1025 -5494 1 1486 231 175 0 0 chrX 118163639 118163679 -48486617 + B1_Mus1 SINE Alu 34 73 -75 1 1486 2239 116 217 26 chrX 118163676 118164136 -48486160 - RLTR6_Mm LTR ERV1 -70 584 37 1 1486 228 218 196 56 chrX 118164138 118164245 -48486051 - RLTR6_Mm LTR ERV1 -532 122 1 1 1486 47069 13 13 1 chrX 118164245 118171699 -48478597 - RLTR6-int LTR ERV1 0 7778 203 1 1486 329 141 239 0 chrX 118171752 118171823 -48478473 + B1_Mur4 SINE Alu 63 150 0 1 1486 650 168 7 0 chrX 118171839 118172084 -48478212 + L1_Mus2 LINE L1 1071 1221 -5436 1 1486 3076 37 11 3 chrX 118172084 118172462 -48477834 + L1Md_F3 LINE L1 6204 6584 0 1 1486 6798 116 10 7 chrX 118172466 118174358 -48475938 + L1_Mus2 LINE L1 4668 6566 0 1 1486 2314 215 22 8 chrX 118174358 118174864 -48475432 + Lx2B LINE L1 6488 7000 0 1 1486 398 176 95 0 chrX 118175098 118175172 -48475124 + MTC LTR MaLR 3 83 -338 2 1486 796 184 52 36 chrX 118175173 118175365 -48474931 - URR1A DNA MER1_type 0 226 32 2 1486 859 62 1 3 chrX 118175302 118175426 -48474870 - B1_Mus1 SINE Alu -25 122 1 2 1486 295 319 36 10 chrX 118175426 118175452 -48474844 - ORR1B1-int LTR MaLR -863 646 616 2 1486 1609 153 116 40 chrX 118175452 118175805 -48474491 + RLTR9E LTR ERVK 1 380 -29 2 1486 247 311 68 0 chrX 118175822 118175896 -48474400 + MTC LTR MaLR 139 217 -204 2 1486 393 259 50 45 chrX 118175901 118176099 -48474197 + RMER17C LTR ERVK 76 274 -136 2 1486 891 0 0 0 chrX 118176102 118176201 -48474095 + (GAA)n Simple_repeat Simple_repeat 2 100 0 2 1486 896 221 11 6 chrX 118176204 118176381 -48473915 + MTC LTR MaLR 244 421 0 2 1486 27614 122 7 25 chrX 118176664 118178879 -48471417 - Lx3_Mus LINE L1 0 7009 4811 2 1486 288 0 0 0 chrX 118178879 118178911 -48471385 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2 1486 27614 115 12 27 chrX 118178911 118179500 -48470796 - Lx3_Mus LINE L1 -1076 4810 4217 2 1486 189 107 0 0 chrX 118179500 118179528 -48470768 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 1486 27614 116 12 29 chrX 118179528 118182702 -48467594 - Lx3_Mus LINE L1 -1670 4216 1133 2 1486 1059 93 0 0 chrX 118182702 118182842 -48467454 + B1_Mus1 SINE Alu 1 140 -8 2 1486 279 0 0 0 chrX 118182842 118182873 -48467423 + (TAA)n Simple_repeat Simple_repeat 2 32 0 2 1486 2556 201 48 95 chrX 118182873 118183818 -48466478 - Lx3_Mus LINE L1 -5852 1132 4 2 1486 3096 95 2 2 chrX 118183950 118184382 -48465914 + L1_Mus2 LINE L1 6132 6563 -3 2 1486 7132 141 15 11 chrX 118184983 118186880 -48463416 + L1VL4 LINE L1 200 2104 -1455 2 1486 4456 178 144 6 chrX 118186877 118187369 -48462927 + Lx LINE L1 4686 5312 -571 2 1486 396 0 0 0 chrX 118187369 118187413 -48462883 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 2 1486 6330 146 38 1 chrX 118187413 118188734 -48461562 + Lx LINE L1 5313 6654 0 2 1486 188 309 50 50 chrX 118188966 118189065 -48461231 - L4 LINE RTE -1691 338 240 2 1486 1592 26 16 0 chrX 118189369 118189558 -48460738 - B2_Mm1t SINE B2 0 193 2 2 1486 2652 160 51 25 chrX 118190181 118190667 -48459629 - RMER13B LTR ERVK -409 499 1 2 1486 3073 292 31 20 chrX 118190669 118191645 -48458651 + Lx5 LINE L1 6063 7048 -2 2 1486 861 244 71 37 chrX 118191701 118191995 -48458301 - L1_Mur3 LINE L1 -46 5834 5531 2 1486 963 257 8 31 chrX 118191992 118192253 -48458043 + Lx6 LINE L1 7193 7447 -13 2 1486 778 297 35 85 chrX 118192813 118193018 -48457278 - RMER17C LTR ERVK -32 378 186 2 1486 432 77 0 0 chrX 118193018 118193083 -48457213 + (CAGA)n Simple_repeat Simple_repeat 2 66 0 2 1486 778 297 35 85 chrX 118193083 118193275 -48457021 - RMER17C LTR ERVK -225 185 1 2 1486 870 335 97 31 chrX 118193332 118193815 -48456481 - MLT2B2 LTR ERVL 0 515 1 2 1486 286 257 77 34 chrX 118193876 118193993 -48456303 + L2a LINE L2 3304 3425 -1 2 1486 222 122 40 20 chrX 118194268 118194318 -48455978 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 2 1486 721 293 133 33 chrX 118194330 118194750 -48455546 - Lx9 LINE L1 -267 7377 6916 2 1486 6066 62 37 5 chrX 118194753 118195536 -48454760 - RLTR13C2 LTR ERVK 0 808 1 2 1486 351 0 0 0 chrX 118195955 118195994 -48454302 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 2 1486 1568 62 5 0 chrX 118196004 118196215 -48454081 - L1Md_F2 LINE L1 -1 6581 6370 2 1486 409 17 35 0 chrX 118196254 118196312 -48453984 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 2 1486 252 0 0 0 chrX 118196322 118196350 -48453946 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 1486 262 348 45 39 chrX 118197938 118198270 -48452026 - L1M3 LINE L1 -476 5713 5380 2 1486 563 346 39 10 chrX 118198313 118198517 -48451779 + B3 SINE B2 1 210 -6 2 1486 448 243 107 44 chrX 118198866 118199025 -48451271 - ORR1D2 LTR MaLR -1 369 201 2 1486 1237 238 74 84 chrX 118199056 118199556 -48450740 - Lx7 LINE L1 -5 7691 7197 2 1486 2638 160 88 42 chrX 118199557 118200357 -48449939 + RMER17A2 LTR ERVK 1 787 -22 2 1486 8380 250 23 15 chrX 118200360 118202200 -48448096 - Lx7 LINE L1 -493 7203 5351 2 1486 4042 52 0 2 chrX 118202200 118202686 -48447610 + L1_Mus1 LINE L1 6082 6566 -1 2 1486 8380 229 33 28 chrX 118202686 118204648 -48445648 - Lx7 LINE L1 -530 5350 3371 2 1486 313 259 62 0 chrX 118204667 118204748 -48445548 - ORR1D2 LTR MaLR -174 200 115 2 1486 1388 288 101 73 chrX 118204754 118205358 -48444938 - ORR1D2-int LTR MaLR -687 683 63 2 1486 224 296 0 0 chrX 118205358 118205412 -48444884 + GA-rich Low_complexity Low_complexity 2 55 0 2 1486 210 91 0 0 chrX 118205475 118205508 -48444788 + (TTTTTA)n Simple_repeat Simple_repeat 4 36 0 2 1486 8100 183 35 7 chrX 118205513 118207662 -48442634 - Lx2A1 LINE L1 -73 6935 4725 2 1486 576 0 0 0 chrX 118207662 118207726 -48442570 + (TTTTG)n Simple_repeat Simple_repeat 3 66 0 2 1486 8100 187 42 6 chrX 118207726 118208415 -48441881 - Lx2A1 LINE L1 -1153 4724 4023 2 1486 2975 75 22 10 chrX 118208415 118208831 -48441465 - BGLII LTR ERVK 0 421 1 2 1486 2631 219 45 50 chrX 118208832 118209772 -48440524 - RMER3D-int LTR ERVK -1 2841 1907 2 1486 1744 164 5 58 chrX 118209952 118210352 -48439944 - RMER3D-int LTR ERVK -1309 1533 1155 2 1486 411 21 0 0 chrX 118210482 118210530 -48439766 + (TTTCC)n Simple_repeat Simple_repeat 3 50 0 2 1486 473 138 32 0 chrX 118210547 118210663 -48439633 - RMER3D-int LTR ERVK -2259 583 489 2 1486 840 199 194 29 chrX 118210833 118211143 -48439153 - RMER3D-int LTR ERVK -1991 851 491 2 1486 2179 68 237 6 chrX 118211568 118211910 -48438386 - BGLII LTR ERVK 0 421 1 2 1486 1458 164 10 10 chrX 118211910 118212217 -48438079 - Lx2A1 LINE L1 -1850 4036 3730 2 1486 591 273 96 24 chrX 118212234 118212647 -48437649 - L1M2 LINE L1 -1621 4525 4043 2 1486 1091 360 62 35 chrX 118212986 118213860 -48436436 - Lx8 LINE L1 -237 7236 6340 2 1486 15541 176 25 24 chrX 118213895 118215475 -48434821 + Lx LINE L1 545 2112 -3771 2 1486 2958 78 5 0 chrX 118215475 118215873 -48434423 - L1_Mus1 LINE L1 0 6567 6168 2 1486 15541 202 49 45 chrX 118215873 118216480 -48433816 + Lx LINE L1 2113 2737 -3146 2 1486 2822 22 0 0 chrX 118216480 118216802 -48433494 + RLTRETN_Mm LTR ERVK 1 322 0 2 1486 15541 192 41 35 chrX 118216802 118220684 -48429612 + Lx LINE L1 2738 6641 -13 2 1486 6161 153 44 5 chrX 118220690 118222744 -48427552 + L1VL4 LINE L1 1110 3293 -2593 2 1486 22 35 0 0 chrX 118222888 118222917 -48427379 + AT_rich Low_complexity Low_complexity 1 29 0 2 1486 432 0 0 0 chrX 118222973 118223021 -48427275 + (A)n Simple_repeat Simple_repeat 1 48 0 2 1486 243 79 0 0 chrX 118223493 118223531 -48426765 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2 1486 2546 142 2 5 chrX 118223532 118223942 -48426354 + L1VL4 LINE L1 4881 5289 -597 2 1486 2393 249 86 10 chrX 118223948 118224955 -48425341 + Lx3C LINE L1 5849 6995 -2 2 1486 921 118 137 0 chrX 118224969 118225130 -48425166 + L1_Mur3 LINE L1 5583 5765 -115 2 185 5900 165 29 23 chrX 118225169 118227320 -48422976 + L1_Mur2 LINE L1 583 4289 -1588 2 1487 342 298 106 37 chrX 118227320 118227508 -48422788 - RLTR25A LTR ERVK 0 1103 903 2 1487 230 125 0 20 chrX 118227740 118227789 -48422507 + (TTTTC)n Simple_repeat Simple_repeat 3 50 0 2 1487 6731 142 61 25 chrX 118227791 118229742 -48420554 - Lx LINE L1 0 6654 4629 2 1487 186 43 0 0 chrX 118229742 118229765 -48420531 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 1487 6731 148 14 7 chrX 118229765 118229782 -48420514 - Lx LINE L1 -1255 4628 4612 2 1487 3076 247 26 21 chrX 118229918 118230755 -48419541 + Lx5 LINE L1 5613 6453 -597 2 1487 2428 215 16 0 chrX 118230763 118231260 -48419036 - Lx2B LINE L1 0 7000 6496 2 1487 12737 83 4 1 chrX 118231348 118233095 -48417201 - L1Md_F2 LINE L1 -490 5393 3641 2 1487 1395 89 0 0 chrX 118233096 118233276 -48417020 + L1Md_F2 LINE L1 5407 5586 -297 2 1487 6805 98 13 1 chrX 118233276 118234243 -48416053 + L1Md_F2 LINE L1 5587 6565 -17 2 1487 253 351 69 88 chrX 118234603 118234909 -48415387 - RLTR25A LTR ERVK -803 300 1 2 1487 408 125 28 0 chrX 118234909 118234981 -48415315 + L1_Mur2 LINE L1 4284 4357 -1520 2 1487 23 78 0 0 chrX 118235153 118235204 -48415092 + AT_rich Low_complexity Low_complexity 1 51 0 2 1487 6205 135 46 12 chrX 118235945 118237097 -48413199 + Lx LINE L1 5457 6648 -6 2 1487 1980 246 39 32 chrX 118238178 118238333 -48411963 - Lx9 LINE L1 -7 7637 7483 2 1487 609 52 0 0 chrX 118238333 118238410 -48411886 + (TA)n Simple_repeat Simple_repeat 1 77 0 2 1487 1980 246 39 32 chrX 118238410 118238838 -48411458 - Lx9 LINE L1 -162 7482 7051 2 1487 702 272 13 6 chrX 118238841 118239000 -48411296 - RLTR20D LTR ERVK -2 566 407 2 1487 629 314 25 34 chrX 118238984 118239221 -48411075 - RLTR20D LTR ERVK -281 287 53 2 1487 355 212 12 12 chrX 118239226 118239312 -48410984 - Lx9 LINE L1 -586 7058 6973 2 1487 302 260 58 29 chrX 118239465 118239568 -48410728 - Lx6 LINE L1 -74 7386 7281 2 1487 23 33 0 0 chrX 118239605 118239635 -48410661 + AT_rich Low_complexity Low_complexity 1 30 0 2 1487 413 271 78 29 chrX 118239806 118240011 -48410285 + L1MC5 LINE L1 7012 7226 -735 2 1487 813 103 0 8 chrX 118240465 118240582 -48409714 - L1VL1 LINE L1 -6257 165 50 2 1487 7688 119 0 3 chrX 118240582 118241756 -48408540 - L1_Mur1 LINE L1 -86 5800 4631 2 1487 22 0 0 0 chrX 118241793 118241815 -48408481 + AT_rich Low_complexity Low_complexity 1 22 0 2 1487 7186 187 33 6 chrX 118241833 118241899 -48408397 - Lx2B LINE L1 0 7000 6931 2 1487 474 18 0 0 chrX 118241899 118241954 -48408342 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1487 9331 192 30 14 chrX 118241954 118243597 -48406699 - Lx2B LINE L1 -70 6930 5290 2 1487 185 0 40 0 chrX 118243597 118243622 -48406674 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2 1487 9331 209 18 43 chrX 118243622 118243637 -48406659 - Lx2B LINE L1 -588 5289 5286 2 1487 4803 170 46 2 chrX 118243637 118244478 -48405818 - Lx3B LINE L1 -10 6963 6086 2 1487 9331 209 18 43 chrX 118244478 118246017 -48404279 - Lx2B LINE L1 -592 5285 3755 2 1487 4160 33 12 0 chrX 118246017 118246504 -48403792 - MT2_Mm LTR ERVL 0 493 1 2 1487 9331 209 18 43 chrX 118246504 118246593 -48403703 - Lx2B LINE L1 -2123 3754 3662 2 1487 1543 184 21 59 chrX 118246620 118246960 -48403336 + ORR1A2 LTR MaLR 1 327 0 2 1487 281 146 0 18 chrX 118246961 118247017 -48403279 - MusHAL1 LINE L1 -455 2257 2203 2 1487 41 36 0 0 chrX 118247024 118247079 -48403217 + AT_rich Low_complexity Low_complexity 1 55 0 2 1487 681 167 0 0 chrX 118247079 118247205 -48403091 - L1_Mur2 LINE L1 -1500 4377 4252 2 1487 1820 168 3 0 chrX 118247205 118247527 -48402769 + Lx LINE L1 6332 6654 0 2 1487 210 37 0 0 chrX 118248301 118248328 -48401968 + (CAT)n Simple_repeat Simple_repeat 1 27 0 2 1487 268 331 19 6 chrX 118248356 118248517 -48401779 - L1MB5 LINE L1 -196 5978 5816 2 1487 292 238 24 32 chrX 118248510 118248636 -48401660 - Lx6 LINE L1 0 7460 7336 2 1487 1661 203 49 9 chrX 118248644 118249002 -48401294 - Lx3C LINE L1 -2 6998 6615 2 1487 592 104 132 0 chrX 118249363 118249469 -48400827 + L1Md_F2 LINE L1 6450 6569 -13 2 1487 256 274 71 43 chrX 118249514 118249655 -48400641 + L1M4c LINE L1 841 985 -5881 2 1487 573 317 95 41 chrX 118249705 118250169 -48400127 + L1M4c LINE L1 1374 1862 -5146 2 1487 248 271 112 18 chrX 118250274 118250443 -48399853 + L1M4c LINE L1 1991 2175 -5159 2 1487 724 326 95 15 chrX 118250941 118251268 -48399028 - MTD LTR MaLR 0 419 67 2 1487 468 296 50 29 chrX 118251311 118251450 -48398846 + B4A SINE B4 106 247 -45 2 1487 267 252 59 0 chrX 118251550 118251669 -48398627 + L1M4c LINE L1 2734 2859 -4149 2 1487 577 341 5 33 chrX 118251763 118251978 -48398318 + B3 SINE B2 5 213 -3 2 1487 2363 209 31 2 chrX 118252044 118252532 -48397764 - Lx5 LINE L1 -551 6499 5998 2 1487 1698 230 35 0 chrX 118252530 118252869 -48397427 + Lx5 LINE L1 6488 6838 -212 2 1487 29 28 0 0 chrX 118253472 118253508 -48396788 + AT_rich Low_complexity Low_complexity 1 36 0 2 1487 477 196 98 0 chrX 118254230 118254342 -48395954 + Lx3B LINE L1 6814 6936 -37 3 1487 4912 73 0 6 chrX 118254691 118255338 -48394958 - L1Md_F2 LINE L1 -11 6571 5929 3 1487 2306 83 0 0 chrX 118255338 118255650 -48394646 + L1_Mm LINE L1 2740 3051 -2832 3 1487 3877 123 2 5 chrX 118256089 118256700 -48393596 - L1_Mus4 LINE L1 -1 6635 6027 3 1487 32 26 0 0 chrX 118256710 118256749 -48393547 + AT_rich Low_complexity Low_complexity 1 39 0 3 1487 1837 168 0 0 chrX 118257043 118257358 -48392938 - Lx2A1 LINE L1 0 7008 6694 3 1487 186 43 0 0 chrX 118257584 118257607 -48392689 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1487 421 292 67 30 chrX 118257700 118257834 -48392462 + ORR1D2 LTR MaLR 6 144 -226 3 1487 1484 87 0 0 chrX 118257834 118258030 -48392266 - L1Md_F2 LINE L1 -569 6013 5818 3 1487 1694 65 0 5 chrX 118258026 118258233 -48392063 + L1Md_F2 LINE L1 5380 5586 -297 3 1487 7392 78 2 8 chrX 118258233 118259234 -48391062 + L1Md_F2 LINE L1 5587 6581 -1 3 1487 1021 33 0 0 chrX 118259235 118259355 -48390941 + L1Md_F2 LINE L1 5786 5905 -677 3 1487 295 316 76 25 chrX 118259355 118259543 -48390753 + ORR1D2 LTR MaLR 155 405 -14 3 1487 1379 260 45 14 chrX 118259971 118260433 -48389863 + Lx9 LINE L1 5421 5932 -1712 3 1487 2646 268 107 28 chrX 118260428 118261468 -48388828 + Lx9 LINE L1 6179 7300 -344 3 1487 23 33 0 0 chrX 118261503 118261533 -48388763 + AT_rich Low_complexity Low_complexity 1 30 0 3 1487 610 313 144 13 chrX 118261972 118262291 -48388005 - ORR1D2 LTR MaLR -5 365 5 3 1487 342 115 0 0 chrX 118262845 118262897 -48387399 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1487 23 0 0 0 chrX 118263413 118263436 -48386860 + AT_rich Low_complexity Low_complexity 1 23 0 3 1487 470 392 74 21 chrX 118263740 118264066 -48386230 - MER21B LTR ERV1 -198 665 323 3 1487 7851 68 12 1 chrX 118264226 118265716 -48384580 + L1Md_A LINE L1 206 1713 -4170 3 1487 7612 19 0 0 chrX 118265707 118266589 -48383707 + L1Md_T LINE L1 4705 5586 -297 3 1487 8970 6 0 0 chrX 118266589 118267585 -48382711 + L1Md_T LINE L1 5587 6582 0 3 1487 34276 37 0 1 chrX 118267586 118274497 -48375799 + L1Md_A LINE L1 1704 6413 -169 3 1487 8307 37 1 0 chrX 118274498 118275532 -48374764 + L1Md_A LINE L1 5587 6582 0 3 1487 1617 40 0 0 chrX 118275534 118275734 -48374562 + L1Md_A LINE L1 6380 6579 -3 3 1487 23 105 0 0 chrX 118276030 118276116 -48374180 + AT_rich Low_complexity Low_complexity 1 86 0 3 1487 32 26 0 0 chrX 118277624 118277663 -48372633 + AT_rich Low_complexity Low_complexity 1 39 0 3 1487 276 266 0 0 chrX 118277679 118277758 -48372538 + (TA)n Simple_repeat Simple_repeat 1 79 0 3 1487 21 0 0 0 chrX 118278324 118278345 -48371951 + AT_rich Low_complexity Low_complexity 1 21 0 3 1487 945 343 49 23 chrX 118278459 118278973 -48371323 + Lx8 LINE L1 6227 6753 -720 3 1487 1208 48 0 7 chrX 118279076 118279224 -48371072 + B1_Mus1 SINE Alu 2 148 0 3 1487 231 36 0 0 chrX 118279235 118279263 -48371033 + (GA)n Simple_repeat Simple_repeat 2 29 0 3 1487 315 0 0 0 chrX 118279681 118279716 -48370580 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1487 296 188 207 64 chrX 118279934 118280122 -48370174 - Lx9 LINE L1 0 7644 7430 3 1487 2017 58 0 4 chrX 118281099 118281360 -48368936 + L1Md_F3 LINE L1 6323 6582 -2 3 1487 277 288 0 15 chrX 118281704 118281771 -48368525 + PB1D10 SINE Alu 35 100 -17 3 1487 213 288 0 0 chrX 118282075 118282134 -48368162 - MER5A DNA MER1_type 0 189 131 3 1487 25496 164 19 12 chrX 118282183 118286358 -48363938 + L1_Mus3 LINE L1 396 4613 -1270 3 1487 1082 141 15 25 chrX 118286358 118286555 -48363741 + B2_Mm2 SINE B2 1 195 0 3 1487 25496 156 14 14 chrX 118286555 118286935 -48363361 + L1_Mus3 LINE L1 4614 4981 -902 3 1487 216 0 0 0 chrX 118286935 118286959 -48363337 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1487 25496 132 11 15 chrX 118286959 118288610 -48361686 + L1_Mus3 LINE L1 4982 6631 -7 3 1487 183 174 28 42 chrX 118288922 118288994 -48361302 + CT-rich Low_complexity Low_complexity 3 73 0 3 1487 181 205 26 0 chrX 118290101 118290140 -48360156 + L3 LINE CR1 1023 1062 -3427 3 1487 279 352 22 11 chrX 118291670 118291762 -48358534 - ID_B1 SINE B4 -36 188 96 3 1487 5253 83 4 1 chrX 118291801 118292509 -48357787 - L1_Mus3 LINE L1 -4 6634 5925 3 1487 5442 201 24 10 chrX 118293248 118294418 -48355878 - Lx3C LINE L1 -2 6974 5789 3 1487 846 116 0 0 chrX 118294427 118294556 -48355740 + (TC)n Simple_repeat Simple_repeat 2 130 0 3 1487 5633 173 35 3 chrX 118294602 118295599 -48354697 - Lx LINE L1 -16 6638 5610 3 1487 1582 116 264 6 chrX 118295599 118295921 -48354375 + RLTR10C LTR ERVK 1 405 -31 3 1487 14587 181 54 57 chrX 118295931 118301233 -48349063 - Lx LINE L1 -267 5616 430 3 1487 477 0 0 0 chrX 118301233 118301286 -48349010 + (TC)n Simple_repeat Simple_repeat 1 53 0 3 1487 5624 144 39 17 chrX 118301286 118301361 -48348935 - Lx LINE L1 -6228 429 356 3 1487 9939 228 237 27 chrX 118301364 118301933 -48348363 - L1VL4 LINE L1 -87 5793 5266 3 1487 188 35 35 0 chrX 118301933 118301962 -48348334 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 3 1487 11463 194 119 17 chrX 118301962 118304345 -48345951 - L1VL4 LINE L1 -615 5265 2054 3 1487 450 0 0 0 chrX 118304345 118304395 -48345901 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1487 11463 183 84 14 chrX 118304395 118305203 -48345093 - L1VL4 LINE L1 -3833 2053 1248 3 1487 1118 232 25 44 chrX 118305186 118305625 -48344671 - L1VL4 LINE L1 -5848 1136 720 3 1487 15262 196 38 10 chrX 118306413 118310840 -48339456 - Lx4B LINE L1 -4 7054 2492 3 1487 2553 202 0 38 chrX 118310837 118311366 -48338930 + L1VL4 LINE L1 227 735 -5567 3 1487 11234 187 192 63 chrX 118311364 118312398 -48337898 + Lx2 LINE L1 1848 3470 -2407 3 1487 216 0 0 0 chrX 118312398 118312422 -48337874 + (CAA)n Simple_repeat Simple_repeat 1 24 0 3 1487 11234 187 192 63 chrX 118312422 118314705 -48335591 + Lx2 LINE L1 3471 5592 -285 3 1487 263 83 0 0 chrX 118314705 118314741 -48335555 + Lx LINE L1 5641 5676 -978 3 1487 1783 187 118 55 chrX 118314743 118315268 -48335028 + RLTR17 LTR ERVK 2 559 -2 3 1487 1146 239 64 64 chrX 118315270 118315791 -48334505 + RMER3D-int LTR ERVK 1 843 -1999 3 1487 2418 107 67 3 chrX 118315885 118316261 -48334035 - MTB LTR MaLR 0 400 1 3 1487 5083 213 98 60 chrX 118316269 118316652 -48333644 + RMER3D-int LTR ERVK 1015 1421 -1421 3 1487 187 150 0 70 chrX 118316652 118316695 -48333601 + L3 LINE CR1 1977 2016 -2473 3 1487 5083 213 98 60 chrX 118316695 118318025 -48332271 + RMER3D-int LTR ERVK 1422 2837 -5 3 1487 3601 175 43 24 chrX 118318029 118318708 -48331588 + RLTR17 LTR ERVK 1 692 0 3 1487 7156 160 40 16 chrX 118318709 118319997 -48330299 + Lx2 LINE L1 5673 6991 -6 3 1487 208 303 0 0 chrX 118320001 118320077 -48330219 + A-rich Low_complexity Low_complexity 1 76 0 3 1487 853 246 0 12 chrX 118320622 118320795 -48329501 - ORR1D1 LTR MaLR -2 372 202 3 1487 2528 110 67 0 chrX 118320797 118320980 -48329316 + BGLII_Mus LTR ERVK 7 190 -232 3 1487 588 53 0 0 chrX 118320980 118321056 -48329240 + (GA)n Simple_repeat Simple_repeat 1 76 0 3 1487 2528 110 67 0 chrX 118321056 118321262 -48329034 + BGLII_Mus LTR ERVK 191 421 -1 3 1487 819 223 67 29 chrX 118321262 118321464 -48328832 - ORR1D1 LTR MaLR -162 212 3 3 1487 737 244 11 6 chrX 118321467 118321648 -48328648 - ORR1D1-int LTR MaLR -1 1369 1188 3 1487 257 0 30 0 chrX 118321654 118321687 -48328609 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 3 1487 21 36 0 0 chrX 118321811 118321839 -48328457 + AT_rich Low_complexity Low_complexity 1 28 0 3 1487 1767 163 130 26 chrX 118322127 118322512 -48327784 + Lx2B LINE L1 6574 6998 -2 3 1487 25 51 0 0 chrX 118322794 118322833 -48327463 + AT_rich Low_complexity Low_complexity 1 39 0 3 1487 22 0 0 0 chrX 118322887 118322909 -48327387 + AT_rich Low_complexity Low_complexity 1 22 0 3 1487 28 113 0 0 chrX 118323173 118323306 -48326990 + AT_rich Low_complexity Low_complexity 1 133 0 3 1487 1184 61 0 13 chrX 118323349 118323499 -48326797 + B1_Mus1 SINE Alu 1 148 0 3 1487 325 44 28 42 chrX 118323499 118323570 -48326726 + (CAAAA)n Simple_repeat Simple_repeat 1 70 0 3 1487 240 328 51 44 chrX 118323628 118323765 -48326531 - B1F1 SINE Alu -9 140 3 3 1487 1435 197 95 3 chrX 118323765 118324061 -48326235 + ORR1B2 LTR MaLR 1 323 -44 3 1487 1056 325 5 4 chrX 118324065 118324410 -48325886 - RMER1A Other Other -577 453 2 3 1487 727 342 0 0 chrX 118324424 118324608 -48325688 + RMER1A Other Other 245 428 -602 3 1487 1819 231 73 11 chrX 118324630 118325068 -48325228 + RMER1B Other Other 596 1060 -6 3 1487 428 70 0 0 chrX 118325068 118325125 -48325171 + ORR1B1 LTR MaLR 338 394 0 3 1487 1015 231 61 102 chrX 118325128 118325538 -48324758 - RLTR9C LTR ERVK 0 393 1 3 1487 384 77 0 0 chrX 118325896 118325948 -48324348 + (A)n Simple_repeat Simple_repeat 1 52 0 3 1487 315 130 0 0 chrX 118326034 118326088 -48324208 + (GA)n Simple_repeat Simple_repeat 2 55 0 3 1487 598 266 21 58 chrX 118326198 118326386 -48323910 + RLTR11B LTR ERVK 273 453 0 3 1487 497 208 20 0 chrX 118326386 118326487 -48323809 + Lx5 LINE L1 5524 5626 -254 3 1487 1352 241 104 22 chrX 118326491 118326906 -48323390 + RLTR16 LTR ERVK 1 449 -56 3 1487 947 156 2 13 chrX 118327122 118327295 -48323001 + Lx5 LINE L1 5631 5840 -284 3 1487 460 314 34 64 chrX 118327417 118327621 -48322675 + B3A SINE B2 1 198 0 3 1487 625 179 32 24 chrX 118327667 118327793 -48322503 + B1_Mur4 SINE Alu 24 150 0 3 1487 242 79 31 31 chrX 118327793 118327858 -48322438 + (CAAAA)n Simple_repeat Simple_repeat 1 65 0 3 1487 25 31 0 0 chrX 118328051 118328083 -48322213 + AT_rich Low_complexity Low_complexity 1 32 0 3 1487 7588 74 0 8 chrX 118328222 118329204 -48321092 - L1_Mus1 LINE L1 0 6567 5594 3 1487 471 338 49 28 chrX 118329301 118329444 -48320852 - RSINE1 SINE B4 0 165 20 3 1487 549 228 0 17 chrX 118329514 118329630 -48320666 + MT2A LTR ERVL 1 114 -419 3 1487 847 0 19 0 chrX 118329630 118329733 -48320563 + (CAAAAA)n Simple_repeat Simple_repeat 3 107 0 3 1487 743 234 63 44 chrX 118329733 118330021 -48320275 + MT2A LTR ERVL 117 524 -77 3 1487 16603 115 21 1 chrX 118330123 118333708 -48316588 - L1Md_F LINE L1 -2241 3642 98 3 1487 1661 228 185 29 chrX 118333862 118334457 -48315839 - RMER6C LTR ERVK 0 690 3 3 1487 454 76 15 29 chrX 118334491 118334550 -48315746 - MTB LTR MaLR 0 400 342 3 1487 3254 48 2 5 chrX 118334550 118334947 -48315349 + MTA_Mm LTR MaLR 1 396 0 3 1487 239 244 58 13 chrX 118335506 118335660 -48314636 - Lx9 LINE L1 -2 7642 7482 3 1487 310 271 93 0 chrX 118335710 118335817 -48314479 - Lx9 LINE L1 -262 7382 7266 3 1487 1063 264 124 70 chrX 118335819 118336392 -48313904 + RLTR26 LTR ERVK 3 637 -5 3 1487 314 261 8 16 chrX 118336577 118336698 -48313598 - Lx9 LINE L1 0 7644 7525 3 1487 402 21 0 0 chrX 118336716 118336763 -48313533 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1487 253 73 0 47 chrX 118337128 118337171 -48313125 - B1_Mm SINE Alu -1 146 106 3 1487 1226 106 0 5 chrX 118337299 118337488 -48312808 - Lx3_Mus LINE L1 0 7009 6822 3 1487 2886 201 148 57 chrX 118337490 118337885 -48312411 + RMER17B LTR ERVK 1 399 -559 3 1487 521 30 15 0 chrX 118337885 118337952 -48312344 + (TC)n Simple_repeat Simple_repeat 2 69 0 3 1487 2886 199 157 59 chrX 118337952 118338432 -48311864 + RMER17B LTR ERVK 400 946 -12 3 1487 2074 109 6 16 chrX 118338443 118338760 -48311536 - Lx3_Mus LINE L1 -185 6824 6511 3 1487 1497 100 42 0 chrX 118338760 118339001 -48311295 - L1_Mur1 LINE L1 -2053 3833 3583 4 1487 12619 139 43 12 chrX 118338993 118341946 -48308350 - L1_Mur1 LINE L1 -2553 3333 3 4 1487 29 47 0 0 chrX 118342817 118342860 -48307436 + AT_rich Low_complexity Low_complexity 1 43 0 4 1487 1483 337 87 27 chrX 118342874 118343918 -48306378 + Lx9 LINE L1 6362 7468 -176 4 1487 21 0 0 0 chrX 118344763 118344784 -48305512 + AT_rich Low_complexity Low_complexity 1 21 0 4 1487 227 292 52 0 chrX 118344837 118344933 -48305363 + L1M4 LINE L1 5068 5168 -978 4 1487 1550 200 42 31 chrX 118345177 118345681 -48304615 + RLTR12A LTR ERVK 28 557 -11 4 1487 6836 139 62 9 chrX 118346841 118347928 -48302368 + Lx3A LINE L1 16 1156 -5828 4 1487 339 25 0 0 chrX 118347928 118347968 -48302328 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 4 1487 6836 103 19 1 chrX 118347968 118348392 -48301904 + Lx3A LINE L1 1157 1600 -4286 4 1487 8960 107 5 8 chrX 118348410 118349879 -48300417 + Lx3A LINE L1 3172 4638 -1248 4 1487 256 48 48 0 chrX 118349879 118349921 -48300375 + (TAA)n Simple_repeat Simple_repeat 2 45 0 4 1487 7900 49 2 0 chrX 118349961 118351461 -48298835 - L1Md_F2 LINE L1 -3 6579 5077 4 1487 7388 122 37 24 chrX 118351461 118353424 -48296872 + Lx3A LINE L1 4650 6646 -335 4 1487 3401 113 80 6 chrX 118353437 118353962 -48296334 - LTRIS2 LTR ERV1 0 564 1 4 1487 4595 127 67 36 chrX 118353962 118354811 -48295485 - RMER17D LTR ERVK -11 878 1 4 1487 1923 130 18 12 chrX 118354811 118355137 -48295159 + Lx3A LINE L1 6641 6968 -13 4 1487 300 70 0 0 chrX 118355137 118355180 -48295116 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 4 1487 445 88 44 0 chrX 118355274 118355365 -48294931 + (CAGA)n Simple_repeat Simple_repeat 2 96 0 4 1487 9717 141 87 77 chrX 118355479 118355599 -48294697 + RLTR1B-int LTR ERV1 949 1098 -2201 4 1487 420 20 0 0 chrX 118355599 118355648 -48294648 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 1487 9717 141 87 77 chrX 118355648 118357855 -48292441 + RLTR1B-int LTR ERV1 1099 3299 0 4 185 2895 125 48 63 chrX 118357855 118358375 -48291921 + RLTR1B LTR ERV1 1 512 0 4 1488 3526 77 107 21 chrX 118358375 118358890 -48291406 - LTRIS2 LTR ERV1 -4 560 1 4 1488 2521 158 30 6 chrX 118359832 118360808 -48289488 + L1VL4 LINE L1 446 1448 -2167 4 1488 4971 197 12 14 chrX 118360844 118361802 -48288494 - RMER17B LTR ERVK -1 957 1 4 1488 15716 197 8 13 chrX 118361802 118365387 -48284909 + L1_Mur1 LINE L1 1742 5307 -579 4 1488 2017 184 61 0 chrX 118365389 118365785 -48284511 - ORR1B1-int LTR MaLR -37 1472 1053 4 1488 1196 253 43 64 chrX 118365773 118366149 -48284147 + RLTR20B3 LTR ERVK 6 373 -204 4 1488 189 107 0 0 chrX 118366178 118366206 -48284090 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1488 1188 68 0 0 chrX 118366206 118366353 -48283943 - B1_Mm SINE Alu 0 147 1 4 1488 509 256 56 62 chrX 118366356 118366535 -48283761 + RLTR20B3 LTR ERVK 395 572 -5 4 1488 4260 194 16 15 chrX 118366532 118367406 -48282890 - ORR1A3-int LTR MaLR -368 1595 721 4 1488 903 200 109 133 chrX 118367368 118367662 -48282634 - MT2B LTR ERVL -314 287 1 4 1488 3464 186 3 54 chrX 118367662 118368175 -48282121 - ORR1A3-int LTR MaLR -1395 568 92 4 1488 1142 140 16 5 chrX 118368175 118368362 -48281934 + B2_Mm2 SINE B2 2 190 -5 4 1488 275 164 109 0 chrX 118368361 118368416 -48281880 - ORR1A3-int LTR MaLR -1860 103 43 4 1488 599 276 11 0 chrX 118368431 118368616 -48281680 + MYSERV6-int LTR ERVK 969 1155 -7804 4 1488 1136 110 29 0 chrX 118368616 118368789 -48281507 + Lx LINE L1 6044 6221 -433 4 1488 784 180 99 16 chrX 118368792 118368984 -48281312 + Lx LINE L1 6446 6653 -1 4 1488 7191 296 47 41 chrX 118369070 118369351 -48280945 + MYSERV6-int LTR ERVK 970 1267 -5283 4 1488 2071 103 3 20 chrX 118369351 118369657 -48280639 + Lx3_Mus LINE L1 6702 7002 -7 4 1488 9142 229 23 33 chrX 118369657 118372793 -48277503 + MYSERV6-int LTR ERVK 1268 5161 -99 4 1488 836 238 42 91 chrX 118372787 118373217 -48277079 + MYSERV6-int LTR ERVK 7813 8221 -738 4 1488 466 103 51 0 chrX 118373268 118373346 -48276950 - B2_Mm2 SINE B2 -107 88 7 4 1488 1998 226 23 18 chrX 118373353 118373925 -48276371 + MYSERV16_I-int LTR ERVK 1566 2140 -186 4 1488 1848 227 79 20 chrX 118374067 118374512 -48275784 + RLTR12A LTR ERVK 1 471 -97 4 1488 5252 227 30 8 chrX 118374512 118375516 -48274780 - L1_Mur3 LINE L1 -161 5719 4715 4 1488 2554 83 6 8 chrX 118375516 118375869 -48274427 + L1Md_F2 LINE L1 6230 6581 -1 4 1488 5252 227 30 8 chrX 118375869 118376272 -48274024 - L1_Mur3 LINE L1 -1166 4714 4282 4 1488 900 142 86 54 chrX 118376286 118376520 -48273776 + ORR1B1-int LTR MaLR 1758 1963 0 4 1488 1571 202 89 20 chrX 118376524 118376882 -48273414 + ORR1B1 LTR MaLR 2 384 -10 4 1488 2221 247 66 50 chrX 118376891 118377645 -48272651 - L1_Mur3 LINE L1 -3122 2758 1995 4 1488 375 73 0 0 chrX 118377645 118377700 -48272596 + (TATG)n Simple_repeat Simple_repeat 2 56 0 4 1488 2221 247 66 50 chrX 118377700 118377869 -48272427 - L1_Mur3 LINE L1 -3886 1994 1820 4 1488 2931 137 45 100 chrX 118377893 118378240 -48272056 - RMER17D2 LTR ERVK 0 809 459 4 1488 240 59 0 0 chrX 118378240 118378274 -48272022 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1488 889 9 18 0 chrX 118378274 118378383 -48271913 + (GA)n Simple_repeat Simple_repeat 1 112 0 4 1488 2931 137 45 100 chrX 118378383 118378573 -48271723 - RMER17D2 LTR ERVK -351 458 267 4 1488 1196 41 7 0 chrX 118378573 118378720 -48271576 + B1_Mus1 SINE Alu 1 148 0 4 1488 2931 137 45 100 chrX 118378720 118378839 -48271457 - RMER17D2 LTR ERVK -543 266 188 4 1488 1462 189 248 9 chrX 118378858 118379502 -48270794 + RLTR13D6 LTR ERVK 10 806 0 4 1488 1380 117 14 5 chrX 118379502 118379702 -48270594 - RMER17D2 LTR ERVK -607 202 1 4 1488 3568 176 34 46 chrX 118379709 118380396 -48269900 - RMER6A LTR ERVK -4 752 67 4 1488 5128 70 0 5 chrX 118380396 118381058 -48269238 - L1Md_F2 LINE L1 -10 6572 5914 4 1488 3568 176 34 46 chrX 118381058 118381131 -48269165 - RMER6A LTR ERVK -690 66 1 4 1488 500 246 0 28 chrX 118381131 118381234 -48269062 - L1_Mur3 LINE L1 -4131 1749 1649 4 1488 2795 93 9 28 chrX 118381234 118381663 -48268633 - BGLII LTR ERVK 0 421 1 4 1488 500 246 0 28 chrX 118381663 118381735 -48268561 - L1_Mur3 LINE L1 -4232 1648 1579 4 1488 345 47 0 0 chrX 118381735 118381778 -48268518 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 4 1488 1079 103 0 0 chrX 118381778 118381923 -48268373 - B1_Mus1 SINE Alu -2 146 2 4 1488 518 219 13 6 chrX 118381930 118382112 -48268184 - L1_Mur3 LINE L1 -4528 1352 1174 4 1488 2006 114 56 27 chrX 118382120 118382493 -48267803 - Lx3_Mus LINE L1 -8 7001 6575 4 1488 499 275 24 36 chrX 118382846 118383012 -48267284 + RLTR23 LTR ERV1 267 430 0 4 1488 189 0 0 0 chrX 118383582 118383603 -48266693 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 4 1488 390 94 0 0 chrX 118383739 118383803 -48266493 + (CCA)n Simple_repeat Simple_repeat 1 64 0 4 1488 280 271 32 8 chrX 118384055 118384178 -48266118 + ETnERV2-int LTR ERVK 1731 1856 -5550 4 1488 583 255 29 38 chrX 118384190 118384532 -48265764 + RLTR19-int LTR ERVK 1109 1447 -4690 4 1488 10781 119 28 14 chrX 118384648 118386344 -48263952 - Lx3_Mus LINE L1 0 7009 5294 4 1488 186 43 0 0 chrX 118386344 118386367 -48263929 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1488 10781 118 20 12 chrX 118386367 118387584 -48262712 - Lx3_Mus LINE L1 -593 5293 4060 4 1488 7728 113 49 3 chrX 118387581 118389270 -48261026 - Lx3_Mus LINE L1 -3478 2408 289 4 1488 447 265 13 70 chrX 118389393 118389551 -48260745 - Lx3_Mus LINE L1 -6813 171 23 4 1488 291 238 12 12 chrX 118389551 118389632 -48260664 - RLTR19-int LTR ERVK -2053 4084 4004 4 1488 239 142 24 55 chrX 118390518 118390645 -48259651 + (TA)n Simple_repeat Simple_repeat 2 124 0 4 1488 830 264 19 110 chrX 118390648 118390886 -48259410 - MT2B LTR ERVL -47 554 348 4 1488 243 0 0 0 chrX 118390886 118390913 -48259383 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1488 830 272 64 112 chrX 118390913 118391125 -48259171 - MT2B LTR ERVL -254 347 2 4 1488 411 151 21 11 chrX 118391797 118391891 -48258405 + (TA)n Simple_repeat Simple_repeat 2 96 0 4 1488 426 20 0 0 chrX 118391998 118392049 -48258247 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1488 378 0 0 0 chrX 118392053 118392095 -48258201 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 1488 356 311 0 43 chrX 118392781 118392875 -48257421 + RSINE1 SINE B4 55 144 -21 4 1488 666 332 30 10 chrX 118393338 118393539 -48256757 + B3 SINE B2 6 210 -6 4 1488 23 54 0 0 chrX 118393926 118393963 -48256333 + AT_rich Low_complexity Low_complexity 1 37 0 4 1488 38 39 0 0 chrX 118394256 118394308 -48255988 + AT_rich Low_complexity Low_complexity 1 52 0 4 1488 401 36 18 0 chrX 118394533 118394588 -48255708 + (CAA)n Simple_repeat Simple_repeat 2 57 0 4 1488 277 264 58 0 chrX 118394605 118394692 -48255604 - Lx7 LINE L1 -400 7296 7205 4 1488 892 314 15 4 chrX 118394794 118395066 -48255230 - Lx6 LINE L1 -177 7283 7009 4 1488 1909 137 19 6 chrX 118395066 118395381 -48254915 - ORR1A3-int LTR MaLR -615 1348 1030 4 1488 7631 134 41 8 chrX 118395408 118396667 -48253629 - Lx3B LINE L1 -3 6970 5670 4 1488 4079 110 43 33 chrX 118396669 118397394 -48252902 - RMER17A LTR ERVK 0 751 20 4 1488 3010 126 6 51 chrX 118397410 118397920 -48252376 - RLTR1C LTR ERV1 -16 487 1 4 1488 852 219 74 22 chrX 118397967 118398238 -48252058 - ORR1A3-int LTR MaLR -940 1023 739 4 1488 1962 107 16 63 chrX 118398250 118398569 -48251727 - ORR1A2 LTR MaLR -23 304 1 4 1488 372 167 26 0 chrX 118398571 118398649 -48251647 - L1_Mur3 LINE L1 -467 5413 5334 4 1488 5360 214 206 39 chrX 118398654 118400219 -48250077 - L1_Mur3 LINE L1 -181 5699 3850 4 1488 210 37 0 0 chrX 118400219 118400246 -48250050 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1488 5360 214 206 39 chrX 118400246 118400598 -48249698 - L1_Mur3 LINE L1 -2031 3849 3463 4 1488 5721 67 29 10 chrX 118400601 118401384 -48248912 - L1Md_F2 LINE L1 -2 6580 5783 4 1488 7384 47 1 6 chrX 118401384 118402294 -48248002 - L1Md_F2 LINE L1 -5 6577 5670 4 1488 2995 80 0 0 chrX 118402294 118402684 -48247612 - L1_Mm LINE L1 -86 5797 5408 4 1488 3785 77 0 0 chrX 118402685 118403182 -48247114 + L1_Mm LINE L1 4893 5389 -494 4 1488 3972 193 24 45 chrX 118403181 118404245 -48246051 - L1_Mur3 LINE L1 -2413 3467 2427 4 1488 29 70 0 0 chrX 118404298 118404355 -48245941 + AT_rich Low_complexity Low_complexity 1 57 0 4 1488 592 315 57 49 chrX 118404736 118404980 -48245316 + RMER15 LTR ERVL 312 557 -18 4 1488 491 388 48 13 chrX 118405225 118405536 -48244760 + RMER15-int LTR ERVL 270 591 -4408 4 1488 2405 265 50 39 chrX 118405793 118406512 -48243784 - RMER1C Other Other -107 1235 509 4 1488 22 35 0 0 chrX 118407442 118407471 -48242825 + AT_rich Low_complexity Low_complexity 1 29 0 4 1488 1410 290 156 36 chrX 118409049 118409575 -48240721 + RMER20B LTR ERVK 1 589 -38 4 1488 1451 92 18 5 chrX 118410017 118410236 -48240060 + L1_Mus1 LINE L1 6346 6567 0 4 1488 625 224 16 0 chrX 118413100 118413225 -48237071 + B1_Mus1 SINE Alu 22 148 0 4 1488 225 0 0 0 chrX 118413280 118413305 -48236991 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 4 1488 450 0 0 0 chrX 118413930 118413980 -48236316 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1488 1523 157 36 227 chrX 118414103 118414632 -48235664 + RLTR23 LTR ERV1 3 430 0 4 1488 1341 297 91 19 chrX 118414632 118415216 -48235080 - Lx7 LINE L1 -470 7226 6601 4 1488 1951 214 50 99 chrX 118415996 118416531 -48233765 - RMER13B LTR ERVK -395 513 5 4 1488 636 14 0 0 chrX 118416534 118416607 -48233689 + (TC)n Simple_repeat Simple_repeat 2 74 0 4 1488 4067 128 42 54 chrX 118416622 118417382 -48232914 - RMER17A LTR ERVK 0 751 1 4 1488 861 256 29 8 chrX 118417928 118418168 -48232128 + Lx7 LINE L1 5335 5579 -301 4 1488 733 296 85 56 chrX 118418190 118418651 -48231645 - MT2B LTR ERVL 0 601 1 4 1488 495 308 176 36 chrX 118418655 118419012 -48231284 + Lx7 LINE L1 5605 6011 -1685 4 1488 21 0 0 0 chrX 118419696 118419717 -48230579 + AT_rich Low_complexity Low_complexity 1 21 0 4 1488 2749 224 32 18 chrX 118420239 118420897 -48229399 + MERVL_2A-int LTR ERVL 5024 5690 -71 4 1488 537 234 7 7 chrX 118420893 118421035 -48229261 + MERVL_2A-int LTR ERVL 5617 5758 -3 4 1488 880 265 39 127 chrX 118421038 118421583 -48228713 + MT2B LTR ERVL 1 601 0 4 1488 519 79 0 43 chrX 118421639 118421732 -48228564 + (TTCC)n Simple_repeat Simple_repeat 4 92 0 4 1488 558 0 0 0 chrX 118421964 118422026 -48228270 + (TC)n Simple_repeat Simple_repeat 1 62 0 5 1488 28 48 0 0 chrX 118422084 118422126 -48228170 + AT_rich Low_complexity Low_complexity 1 42 0 5 1488 3073 61 10 0 chrX 118422248 118422643 -48227653 - L1_Mus1 LINE L1 0 6567 6169 5 1488 25 65 0 0 chrX 118422654 118422700 -48227596 + AT_rich Low_complexity Low_complexity 1 46 0 5 1488 390 158 82 35 chrX 118422701 118422872 -48227424 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 1488 438 345 46 16 chrX 118422902 118423208 -48227088 - L1M2 LINE L1 -1006 5137 4823 5 1488 2588 186 4 8 chrX 118423216 118423698 -48226598 - L1_Mur1 LINE L1 -49 5837 5358 5 1488 2539 34 0 50 chrX 118423720 118424059 -48226237 + RLTRETN_Mm LTR ERVK 1 322 0 5 1488 20919 38 1 7 chrX 118424059 118426631 -48223665 + MMETn-int LTR ERVK 1 2556 -2288 5 1488 872 0 0 0 chrX 118426652 118426762 -48223534 - L1Md_A LINE L1 0 6582 6473 5 1488 2507 4 0 0 chrX 118426762 118427039 -48223257 + L1Md_A LINE L1 6183 6459 -123 5 1488 17873 51 8 24 chrX 118427039 118429377 -48220919 + MMETn-int LTR ERVK 2544 4844 0 5 1488 2530 43 0 45 chrX 118429377 118429714 -48220582 + RLTRETN_Mm LTR ERVK 1 322 0 5 1488 3098 179 19 7 chrX 118429715 118430289 -48220007 + Lx3C LINE L1 6351 6931 -45 5 1488 14438 168 22 43 chrX 118430284 118432194 -48218102 - L1_Mm LINE L1 -344 5539 3656 5 1488 459 0 0 0 chrX 118432194 118432245 -48218051 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 1488 14438 168 22 43 chrX 118432245 118433280 -48217016 - L1_Mm LINE L1 -2228 3655 2658 5 1488 2459 109 65 10 chrX 118433280 118433466 -48216830 + BGLII_Mus LTR ERVK 4 188 -234 5 1488 591 62 0 0 chrX 118433466 118433546 -48216750 + (GA)n Simple_repeat Simple_repeat 1 80 0 5 1488 2459 109 65 10 chrX 118433546 118433756 -48216540 + BGLII_Mus LTR ERVK 189 422 0 5 1488 14438 168 22 43 chrX 118433756 118433857 -48216439 - L1_Mm LINE L1 -3226 2657 2557 5 1488 5743 88 0 10 chrX 118433858 118434659 -48215637 - L1Md_F2 LINE L1 -12 6570 5778 5 1488 7095 86 1 1 chrX 118434659 118436054 -48214242 - L1Md_F2 LINE L1 -24 6558 5164 5 1488 7932 151 13 14 chrX 118436052 118438053 -48212243 - L1VL4 LINE L1 -1364 2195 199 5 1488 516 53 0 0 chrX 118438736 118438812 -48211484 - L1_Mus4 LINE L1 -2 6634 6559 5 1488 2347 69 44 0 chrX 118438813 118439132 -48211164 - L1Md_F2 LINE L1 -485 6097 5765 5 1488 5443 176 36 1 chrX 118439129 118440836 -48209460 + Lx LINE L1 4659 6432 -222 5 1488 358 317 35 66 chrX 118440838 118441023 -48209273 - RMER13B LTR ERVK -122 836 593 5 1488 2878 47 7 68 chrX 118441023 118441436 -48208860 + RLTR10 LTR ERVK 1 388 -2 5 1488 358 301 28 63 chrX 118441436 118441464 -48208832 - RMER13B LTR ERVK -316 592 572 5 1488 13574 23 15 0 chrX 118441464 118443435 -48206861 + RLTR10-int LTR ERVK 57 1984 -3 5 1488 2932 47 7 68 chrX 118443437 118443852 -48206444 + RLTR10 LTR ERVK 1 390 0 5 1488 1270 248 90 117 chrX 118443859 118444077 -48206219 - RMER17B LTR ERVK -312 646 432 5 1488 747 33 0 0 chrX 118444077 118444167 -48206129 + (GA)n Simple_repeat Simple_repeat 2 91 0 5 1488 1270 248 90 117 chrX 118444167 118444605 -48205691 - RMER17B LTR ERVK -527 431 9 5 1488 2046 239 50 93 chrX 118444671 118445378 -48204918 - RMER6C LTR ERVK 0 690 15 5 1488 634 306 9 19 chrX 118445546 118445746 -48204550 - Tigger5 DNA MER2_type -49 2357 2159 5 1488 1151 56 21 0 chrX 118445746 118445889 -48204407 + B1_Mus2 SINE Alu 2 147 0 5 1488 358 366 20 25 chrX 118445907 118446103 -48204193 - Tigger5 DNA MER2_type -2134 272 78 5 1488 355 332 80 20 chrX 118446183 118446383 -48203913 + L1MEf LINE L1 1469 1680 -4520 5 1488 351 275 25 0 chrX 118446882 118447002 -48203294 + MLT2B4 LTR ERVL 3 125 -431 5 1488 301 362 49 60 chrX 118447008 118447193 -48203103 + MLT2B4 LTR ERVL 102 284 -270 5 1488 323 415 0 40 chrX 118447319 118447545 -48202751 - MLT1F-int LTR MaLR -259 1230 1014 5 1488 351 98 0 0 chrX 118447547 118447608 -48202688 + (T)n Simple_repeat Simple_repeat 1 61 0 5 1488 23 0 0 0 chrX 118447859 118447882 -48202414 + AT_rich Low_complexity Low_complexity 1 23 0 5 1488 282 29 0 0 chrX 118448334 118448369 -48201927 + (CAAAAA)n Simple_repeat Simple_repeat 4 38 0 5 1488 302 378 58 31 chrX 118450279 118450536 -48199760 - MLT1F-int LTR MaLR -599 890 627 5 1488 5727 243 54 50 chrX 118450654 118452514 -48197782 - Lx7 LINE L1 -4 7692 5825 5 1488 26984 87 6 28 chrX 118452549 118454908 -48195388 - L1Md_F2 LINE L1 -14 6568 4210 5 1488 378 0 0 0 chrX 118454908 118454950 -48195346 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 1488 26984 115 9 48 chrX 118454950 118456295 -48194001 - L1Md_F2 LINE L1 -1674 4209 3054 5 1488 2966 75 5 32 chrX 118456295 118456706 -48193590 + MTB LTR MaLR 1 400 0 5 1488 26984 132 9 46 chrX 118456706 118459089 -48191207 - L1Md_F2 LINE L1 -2830 3053 682 5 1488 1138 234 61 28 chrX 118459154 118459515 -48190781 - RMER6-int LTR ERVK -2790 387 15 5 1488 924 187 38 6 chrX 118459515 118459698 -48190598 - RMER6C LTR ERVK 0 690 502 5 1488 3018 219 56 9 chrX 118459766 118460411 -48189885 - RLTR17 LTR ERVK -17 675 1 5 1488 202 222 19 0 chrX 118460437 118460491 -48189805 + (AACTG)n Simple_repeat Simple_repeat 2 56 0 5 1488 539 239 35 17 chrX 118460522 118460790 -48189506 - Lx9 LINE L1 -1621 6023 5713 5 1488 1109 249 98 8 chrX 118460784 118460908 -48189388 + Lx9 LINE L1 7043 7169 -475 5 1488 1715 38 5 0 chrX 118460908 118461118 -48189178 + L1Md_T LINE L1 6372 6582 0 5 1488 1109 249 98 8 chrX 118461118 118461381 -48188915 + Lx9 LINE L1 7170 7464 -180 5 1488 576 84 0 0 chrX 118461387 118461470 -48188826 + (TG)n Simple_repeat Simple_repeat 2 84 0 5 1488 21 36 0 0 chrX 118462091 118462119 -48188177 + AT_rich Low_complexity Low_complexity 1 28 0 5 1488 1484 265 3 17 chrX 118462135 118462492 -48187804 - MTC LTR MaLR 0 421 70 5 1488 2418 63 119 11 chrX 118462659 118463011 -48187285 + RLTR10 LTR ERVK 1 390 0 5 1488 226 235 20 0 chrX 118463012 118463063 -48187233 - RMER6C LTR ERVK -139 551 500 5 1488 186 98 59 0 chrX 118463084 118463135 -48187161 + (AACTG)n Simple_repeat Simple_repeat 4 57 0 5 1488 1220 200 151 43 chrX 118463202 118463526 -48186770 - RMER6C LTR ERVK -331 359 1 5 1488 340 247 0 11 chrX 118463536 118463626 -48186670 - Lx7 LINE L1 -1450 6246 6158 5 1488 2403 212 22 16 chrX 118463627 118464125 -48186171 + RLTR19C LTR ERVK 3 503 -3 5 1488 452 179 0 12 chrX 118464192 118464277 -48186019 - ORR1B1 LTR MaLR -8 386 303 5 1488 1343 199 120 21 chrX 118464277 118464611 -48185685 - ORR1B2 LTR MaLR 0 367 1 5 1488 337 286 10 48 chrX 118464662 118464765 -48185531 + ORR1A4 LTR MaLR 91 189 -140 5 1488 2029 229 7 14 chrX 118464699 118465181 -48185115 - ORR1B2-int LTR MaLR -1031 478 1 5 1488 962 215 67 63 chrX 118465205 118465458 -48184838 - ORR1B2 LTR MaLR -42 352 99 5 1488 4016 213 25 48 chrX 118465458 118466375 -48183921 + RMER13B LTR ERVK 1 896 -12 5 1488 396 205 16 71 chrX 118466347 118466473 -48183823 - ORR1B2 LTR MaLR -248 119 1 5 1488 24 53 0 0 chrX 118466657 118466695 -48183601 + AT_rich Low_complexity Low_complexity 1 38 0 5 1488 32 43 0 0 chrX 118466877 118466923 -48183373 + AT_rich Low_complexity Low_complexity 1 46 0 5 1488 1089 95 0 0 chrX 118467448 118467595 -48182701 + B1_Mus1 SINE Alu 2 148 0 5 1488 243 0 0 0 chrX 118467595 118467622 -48182674 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1488 21 0 0 0 chrX 118468420 118468441 -48181855 + AT_rich Low_complexity Low_complexity 1 21 0 5 1488 223 271 11 17 chrX 118468827 118468938 -48181358 + A-rich Low_complexity Low_complexity 1 110 0 5 1488 330 304 6 17 chrX 118468952 118469126 -48181170 - Lx7 LINE L1 -284 7412 7241 5 1488 236 247 12 72 chrX 118469157 118469240 -48181056 - Lx7 LINE L1 -442 7254 7177 5 1488 839 238 5 19 chrX 118469248 118469458 -48180838 - Lx4B LINE L1 -235 6823 6617 5 1488 610 177 16 24 chrX 118469493 118469620 -48180676 - Lx2 LINE L1 -13 6984 6859 5 1488 3765 190 30 3 chrX 118469620 118470387 -48179909 - L1_Mm LINE L1 -15 5868 5080 5 1488 11705 127 58 5 chrX 118470413 118473370 -48176926 - L1_Mus3 LINE L1 0 6638 3525 5 1488 1542 117 60 0 chrX 118473369 118473650 -48176646 - MusHAL1 LINE L1 -752 1960 1663 5 1488 9334 109 85 2 chrX 118473654 118476069 -48174227 - L1_Mus1 LINE L1 -1 6566 3913 5 1488 8835 231 22 16 chrX 118476069 118478864 -48171432 - ETnERV2-int LTR ERVK -2019 5387 1791 5 1488 3353 136 50 0 chrX 118479102 118479648 -48170648 - ETnERV2-int LTR ERVK -1658 1656 1084 5 1488 8020 26 0 0 chrX 118479648 118480942 -48169354 - L1Md_A LINE L1 -1 6581 5288 5 1488 37652 23 1 6 chrX 118480941 118487148 -48163148 - L1Md_T LINE L1 0 6582 410 5 1488 1358 117 0 0 chrX 118487148 118487344 -48162952 - ETnERV2-int LTR ERVK -2223 1091 896 5 1488 620 186 141 19 chrX 118487344 118487500 -48162796 + RLTR9E LTR ERVK 106 259 -150 5 23 33430 74 2 18 chrX 118487553 118493713 -48156583 - L1Md_F2 LINE L1 -12 6570 513 5 1489 706 169 26 36 chrX 118493713 118493918 -48156378 + RLTR9C LTR ERVK 117 409 0 5 1489 4388 157 9 4 chrX 118493918 118494698 -48155598 - L1Md_F LINE L1 -5621 898 115 5 1489 5329 135 14 46 chrX 118494700 118496438 -48153858 - L1VL1 LINE L1 -1825 1873 193 5 1489 14069 200 16 28 chrX 118496438 118498368 -48151928 - L1_Mur1 LINE L1 -859 5027 3164 5 1489 236 53 26 0 chrX 118498368 118498406 -48151890 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1489 14069 200 16 28 chrX 118498406 118499510 -48150786 - L1_Mur1 LINE L1 -2723 3163 2033 5 1489 228 35 0 0 chrX 118499510 118499539 -48150757 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1489 14069 200 16 28 chrX 118499539 118500000 -48150296 - L1_Mur1 LINE L1 -3854 2032 1574 5 1489 4309 130 30 1 chrX 118500000 118500952 -48149344 - L1VL4 LINE L1 -2344 1215 245 1 1489 535 230 0 0 chrX 118500953 118501079 -48149217 - Lx4B LINE L1 -430 6628 6503 2 1489 3022 183 5 45 chrX 118501079 118501680 -48148616 - RMER19A LTR ERVK 0 737 161 3 1489 1674 242 101 15 chrX 118501680 118502145 -48148151 + RLTR16 LTR ERVK 1 505 0 4 1489 1116 85 6 29 chrX 118502145 118502315 -48147981 - RMER19A LTR ERVK -571 166 1 5 1489 2263 221 44 4 chrX 118502315 118502816 -48147480 - Lx5 LINE L1 -566 6484 5964 6 1489 4213 78 0 0 chrX 118503051 118503603 -48146693 - L1_Mm LINE L1 -717 5166 4615 7 1489 21 0 0 0 chrX 118504795 118504816 -48145480 + AT_rich Low_complexity Low_complexity 1 21 0 8 1489 315 0 0 0 chrX 118505056 118505091 -48145205 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 1489 347 397 77 27 chrX 118505106 118505365 -48144931 - B4A SINE B4 -16 276 5 1 1489 2709 199 142 47 chrX 118505654 118506332 -48143964 + L1VL2 LINE L1 122 903 -5432 1 1489 239 54 0 26 chrX 118506332 118506370 -48143926 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 1489 4293 144 11 30 chrX 118506370 118507230 -48143066 + MusHAL1 LINE L1 1 843 -1869 1 1489 778 326 84 70 chrX 118507248 118507497 -48142799 + Lx7 LINE L1 6807 7061 -635 1 1489 357 24 0 0 chrX 118507497 118507539 -48142757 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1489 778 326 84 70 chrX 118507539 118507814 -48142482 + Lx7 LINE L1 7062 7337 -359 1 1489 26 64 0 0 chrX 118507918 118507965 -48142331 + AT_rich Low_complexity Low_complexity 1 47 0 1 1489 965 129 0 0 chrX 118508352 118508492 -48141804 - B1_Mus1 SINE Alu -8 140 1 1 1489 364 306 25 83 chrX 118508493 118508735 -48141561 - L1M3 LINE L1 -1371 4769 4542 1 1489 276 272 62 28 chrX 118508771 118508949 -48141347 + L1M3 LINE L1 4973 5156 -984 1 1489 6508 186 38 2 chrX 118508976 118510432 -48139864 + Lx3C LINE L1 5450 6965 -11 2 1489 26 50 0 0 chrX 118510484 118510524 -48139772 + AT_rich Low_complexity Low_complexity 1 40 0 2 1489 289 277 21 83 chrX 118510827 118511092 -48139204 + L1M3 LINE L1 5187 5444 -868 1 1489 4129 110 93 0 chrX 118511301 118511944 -48138352 - L1_Mus2 LINE L1 -1 6565 5863 2 1489 12020 136 56 287 chrX 118511944 118512556 -48137740 - L1Md_F LINE L1 -596 5287 4677 2 1489 429 36 0 0 chrX 118512556 118512611 -48137685 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 2 1489 1247 14 0 0 chrX 118512611 118512756 -48137540 - B1_Mm SINE Alu -2 145 1 2 1489 12020 136 56 287 chrX 118512756 118513590 -48136706 - L1Md_F LINE L1 -1207 4676 3850 2 1489 1655 197 13 3 chrX 118513590 118513896 -48136400 - RLTR27 LTR ERVK 0 309 1 2 1489 12020 166 62 245 chrX 118513896 118518725 -48131571 - L1Md_F LINE L1 -2034 3849 218 2 1489 339 340 44 5 chrX 118518874 118519078 -48131218 + B3 SINE B2 1 212 -4 2 1489 702 245 14 0 chrX 118519244 118519383 -48130913 + B1_Mur4 SINE Alu 1 141 -9 2 1489 30338 99 23 6 chrX 118519402 118524745 -48125551 - L1Md_F2 LINE L1 0 6582 1147 2 1489 379 125 0 0 chrX 118524751 118524807 -48125489 - L1Md_F2 LINE L1 -6081 535 480 2 1489 1773 135 8 9 chrX 118524807 118525103 -48125193 - L1VL1 LINE L1 -5968 454 1 3 1489 2155 211 84 38 chrX 118525556 118526078 -48124218 - Lx4B LINE L1 -4 7054 6509 3 1489 24 0 0 0 chrX 118526132 118526156 -48124140 + AT_rich Low_complexity Low_complexity 1 24 0 3 1489 1020 116 7 0 chrX 118526234 118526381 -48123915 - B1_Mus1 SINE Alu 0 148 1 3 1489 21 0 0 0 chrX 118526977 118526998 -48123298 + AT_rich Low_complexity Low_complexity 1 21 0 3 1489 22 35 0 0 chrX 118527283 118527312 -48122984 + AT_rich Low_complexity Low_complexity 1 29 0 3 1489 1211 52 23 17 chrX 118528072 118528247 -48122049 + L1Md_F3 LINE L1 6399 6574 -10 3 1489 21 0 0 0 chrX 118529182 118529203 -48121093 + AT_rich Low_complexity Low_complexity 1 21 0 3 1489 25 31 0 0 chrX 118529274 118529306 -48120990 + AT_rich Low_complexity Low_complexity 1 32 0 3 1489 186 176 0 0 chrX 118529598 118529649 -48120647 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 1489 937 99 43 0 chrX 118530043 118530184 -48120112 - L1_Mus2 LINE L1 0 6566 6420 4 1489 21 0 0 0 chrX 118530548 118530569 -48119727 + AT_rich Low_complexity Low_complexity 1 21 0 4 1489 23 0 0 0 chrX 118530689 118530712 -48119584 + AT_rich Low_complexity Low_complexity 1 23 0 4 1489 24 0 0 0 chrX 118532065 118532089 -48118207 + AT_rich Low_complexity Low_complexity 1 24 0 4 1489 21 0 0 0 chrX 118532283 118532304 -48117992 + AT_rich Low_complexity Low_complexity 1 21 0 4 1489 441 0 0 0 chrX 118532458 118532507 -48117789 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1489 810 200 0 6 chrX 118532507 118532668 -48117628 + L1_Mur1 LINE L1 5064 5223 -663 4 1489 1521 290 71 4 chrX 118532671 118533138 -48117158 + Lx5 LINE L1 6546 7043 -7 4 1489 488 324 179 17 chrX 118533391 118533564 -48116732 + Lx8 LINE L1 7020 7231 -242 4 1489 243 0 0 0 chrX 118533564 118533591 -48116705 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1489 488 324 179 17 chrX 118533591 118533718 -48116578 + Lx8 LINE L1 7232 7368 -105 4 1489 453 36 0 0 chrX 118533769 118533824 -48116472 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1489 205 75 24 24 chrX 118534203 118534244 -48116052 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 1489 271 301 72 30 chrX 118534452 118534716 -48115580 + L1MB7 LINE L1 5651 5925 -259 5 1489 227 243 0 14 chrX 118534836 118534907 -48115389 + L1MB7 LINE L1 6103 6172 -12 5 1489 1109 82 7 0 chrX 118535026 118535172 -48115124 + B1_Mus2 SINE Alu 1 147 0 5 1489 310 94 31 0 chrX 118535199 118535263 -48115033 + (CAAAAA)n Simple_repeat Simple_repeat 2 67 0 5 1489 21 36 0 0 chrX 118535365 118535393 -48114903 + AT_rich Low_complexity Low_complexity 1 28 0 5 1489 5310 91 0 50 chrX 118535400 118536074 -48114222 + L1_Mm LINE L1 4571 5234 -649 5 1489 378 61 0 0 chrX 118536074 118536123 -48114173 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 1489 5310 91 0 50 chrX 118536123 118536274 -48114022 + L1_Mm LINE L1 5235 5355 -528 5 1489 702 84 19 0 chrX 118536560 118536667 -48113629 + L1_Mus1 LINE L1 6456 6564 -3 5 1489 7302 160 21 126 chrX 118538135 118540086 -48110210 + MusHAL1 LINE L1 571 2030 -3847 5 1489 2128 72 69 0 chrX 118540086 118540376 -48109920 + L1_Mus1 LINE L1 6258 6567 0 6 1489 11683 101 26 8 chrX 118540376 118542227 -48108069 + MusHAL1 LINE L1 1983 3858 -56 5 1489 533 338 33 22 chrX 118542842 118543117 -48107179 + Lx8 LINE L1 6357 6634 -839 6 1489 358 363 57 5 chrX 118543288 118543482 -48106814 + RMER15 LTR ERVL 275 478 -97 6 1489 746 325 130 36 chrX 118543543 118543838 -48106458 + Lx8 LINE L1 6630 6972 -501 6 1489 2165 71 25 0 chrX 118543838 118544121 -48106175 + L1_Mus1 LINE L1 6263 6552 -15 6 1489 483 33 0 0 chrX 118544121 118544182 -48106114 + (TA)n Simple_repeat Simple_repeat 1 61 0 6 1489 746 325 130 36 chrX 118544182 118544323 -48105973 + Lx8 LINE L1 6973 7107 -366 6 1489 279 0 0 0 chrX 118544852 118544883 -48105413 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1489 3657 167 27 13 chrX 118546465 118547724 -48102572 - L1VL4 LINE L1 -2066 1493 216 6 1489 5681 210 24 25 chrX 118547724 118548267 -48102029 - L1_Mur1 LINE L1 -3290 2596 2052 6 1489 288 0 0 0 chrX 118548267 118548299 -48101997 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 1489 5681 204 24 39 chrX 118548299 118549304 -48100992 - L1_Mur1 LINE L1 -3835 2051 1044 6 1489 6443 83 18 6 chrX 118549329 118550214 -48100082 - L1Md_F2 LINE L1 0 6582 5687 6 1489 4059 80 5 0 chrX 118550213 118550774 -48099522 + L1Md_F2 LINE L1 4963 5526 -357 6 1489 225 0 0 0 chrX 118550772 118550798 -48099498 + Lx LINE L1 5661 5686 -968 7 1489 442 266 70 31 chrX 118551512 118551640 -48098656 + B1_Mur1 SINE Alu 3 135 -14 7 1489 393 316 78 16 chrX 118552068 118552261 -48098035 - B3 SINE B2 -10 206 2 7 1489 32 67 0 0 chrX 118552261 118552321 -48097975 + AT_rich Low_complexity Low_complexity 1 60 0 7 1489 2105 93 65 20 chrX 118552696 118553047 -48097249 - IAPLTR1_Mm LTR ERVK 0 367 1 7 1489 38201 22 5 1 chrX 118553051 118559477 -48090819 - IAPEz-int LTR ERVK -3 6478 8 7 1489 2105 93 65 20 chrX 118559477 118559828 -48090468 - IAPLTR1_Mm LTR ERVK 0 367 1 7 1489 21 0 0 0 chrX 118560538 118560559 -48089737 + AT_rich Low_complexity Low_complexity 1 21 0 7 1489 2534 161 9 11 chrX 118560582 118561029 -48089267 - Lx LINE L1 -6 6648 6203 7 1489 255 114 0 0 chrX 118561125 118561169 -48089127 + (TAAA)n Simple_repeat Simple_repeat 4 47 0 7 1489 2289 230 24 66 chrX 118561330 118561506 -48088790 + L1_Mur3 LINE L1 5115 5295 -585 7 1489 2260 119 14 3 chrX 118561506 118561861 -48088435 + L1_Mus3 LINE L1 6280 6638 0 7 1489 2289 230 24 66 chrX 118561861 118562395 -48087901 + L1_Mur3 LINE L1 5296 5795 -85 7 1489 3881 169 29 0 chrX 118562394 118563040 -48087256 + L1VL4 LINE L1 6 670 -5632 8 1489 13799 191 27 26 chrX 118563039 118566231 -48084065 + Lx2A1 LINE L1 1282 4478 -1408 8 1489 34812 49 1 3 chrX 118566229 118571453 -48078843 + L1Md_T LINE L1 278 5589 -297 8 1489 8157 46 0 2 chrX 118571453 118572451 -48077845 + L1Md_T LINE L1 5590 6585 0 8 1489 3159 250 21 52 chrX 118572469 118574161 -48076135 + Lx2A1 LINE L1 5281 6905 -103 8 1489 4338 91 9 0 chrX 118574161 118574771 -48075525 + RLTR13B1 LTR ERVK 1 599 -294 8 1489 8295 73 12 10 chrX 118574771 118576651 -48073645 - L1Md_F2 LINE L1 -20 6562 4667 8 1489 885 292 156 19 chrX 118576722 118577145 -48073151 + Lx6 LINE L1 6740 7220 -240 8 1489 2707 39 3 20 chrX 118577977 118578031 -48072265 + L1Md_F2 LINE L1 5248 5301 -582 8 1489 6505 32 50 4 chrX 118578031 118578817 -48071479 + RLTR13B2 LTR ERVK 1 822 0 8 1489 2707 41 3 21 chrX 118578817 118579107 -48071189 + L1Md_F2 LINE L1 5302 5612 -688 8 1489 7350 80 0 13 chrX 118579107 118580116 -48070180 + L1Md_F2 LINE L1 5587 6582 0 8 1489 1354 246 44 80 chrX 118580116 118580335 -48069961 + L1M1 LINE L1 5613 5821 -479 8 1489 450 0 0 0 chrX 118580445 118580495 -48069801 + (GA)n Simple_repeat Simple_repeat 1 50 0 8 1489 276 272 0 0 chrX 118581004 118581085 -48069211 + L1MC3 LINE L1 6859 6939 -846 9 1489 252 266 53 0 chrX 118581297 118581391 -48068905 + L1MC3 LINE L1 7207 7305 -480 9 1489 1381 71 16 0 chrX 118581496 118581679 -48068617 + B2_Mm1t SINE B2 1 186 -7 9 1489 519 112 0 0 chrX 118582203 118582292 -48068004 + (TTTTC)n Simple_repeat Simple_repeat 2 90 0 9 1489 484 301 8 59 chrX 118582392 118582589 -48067707 + RMER17C LTR ERVK 1 184 -226 9 1489 459 0 0 0 chrX 118582589 118582640 -48067656 + (TC)n Simple_repeat Simple_repeat 2 52 0 9 1489 484 301 8 59 chrX 118582640 118582679 -48067617 + RMER17C LTR ERVK 185 224 -186 9 1489 738 269 76 134 chrX 118582934 118583419 -48066877 - RMER4A LTR ERVK -9 457 1 9 1489 21 36 0 0 chrX 118585217 118585245 -48065051 + AT_rich Low_complexity Low_complexity 1 28 0 9 1489 21 0 0 0 chrX 118586908 118586929 -48063367 + AT_rich Low_complexity Low_complexity 1 21 0 9 1489 202 118 0 29 chrX 118587204 118587222 -48063074 + (TTTTC)n Simple_repeat Simple_repeat 3 20 0 9 1489 1178 61 0 0 chrX 118587222 118587369 -48062927 - B1_Mm SINE Alu 0 147 1 9 1489 202 118 0 29 chrX 118587369 118587385 -48062911 + (TTTTC)n Simple_repeat Simple_repeat 2 17 0 1 1489 424 370 14 0 chrX 118587995 118588133 -48062163 - ID_B1 SINE B4 0 224 85 1 1489 3335 38 2 0 chrX 118588145 118588539 -48061757 - MTA_Mm LTR MaLR -1 395 1 1 1489 1063 275 75 56 chrX 118588617 118589187 -48061109 + Tigger2b DNA MER2_type 29 609 -117 1 1489 456 169 12 12 chrX 118589184 118589268 -48061028 + Lx7 LINE L1 7238 7321 -375 1 1489 645 78 26 0 chrX 118589280 118589395 -48060901 + L1_Mus3 LINE L1 6515 6632 -6 1 1489 1005 122 0 7 chrX 118589421 118589569 -48060727 + B1_Mus1 SINE Alu 2 148 0 1 1489 770 229 69 0 chrX 118589573 118589748 -48060548 - RMER4B LTR ERVK -378 207 21 1 1489 443 255 0 36 chrX 118589761 118589871 -48060425 - Lx7 LINE L1 -1001 6695 6590 1 1489 247 316 36 48 chrX 118590358 118590441 -48059855 - B1F2 SINE Alu -57 92 11 1 1489 4567 139 11 50 chrX 118591262 118592104 -48058192 - RMER17D2 LTR ERVK 0 809 1 1 1489 5441 150 57 39 chrX 118592111 118593194 -48057102 - RMER17A-int LTR ERVK -3 1725 623 1 1489 633 236 113 20 chrX 118593477 118593552 -48056744 - RMER17A-int LTR ERVK -1504 224 128 1 1489 886 18 0 18 chrX 118593552 118593666 -48056630 + (GGGAGA)n Simple_repeat Simple_repeat 5 116 0 1 1489 633 236 113 20 chrX 118593666 118593793 -48056503 - RMER17A-int LTR ERVK -1601 127 3 1 1489 1150 195 13 8 chrX 118593795 118594033 -48056263 - RMER17D2 LTR ERVK 0 809 571 1 1489 2714 134 21 0 chrX 118594033 118594556 -48055740 + Lx2 LINE L1 5496 6027 -970 1 1489 2170 200 2 18 chrX 118594556 118595008 -48055288 + Lx2 LINE L1 6551 6995 -2 1 1489 225 94 0 0 chrX 118595500 118595532 -48054764 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1489 264 387 131 40 chrX 118595670 118595845 -48054451 - B4A SINE B4 0 292 102 1 1489 21 36 0 0 chrX 118596201 118596229 -48054067 + AT_rich Low_complexity Low_complexity 1 28 0 1 1489 4138 172 68 7 chrX 118596377 118597187 -48053109 + Lx3A LINE L1 209 1067 -5917 1 1489 8491 128 17 8 chrX 118597194 118599227 -48051069 + Lx3A LINE L1 4932 6979 -2 1 1489 642 60 0 0 chrX 118599433 118599516 -48050780 + (GA)n Simple_repeat Simple_repeat 2 84 0 1 1489 549 44 0 0 chrX 118600056 118600124 -48050172 + (TA)n Simple_repeat Simple_repeat 1 68 0 1 1489 1155 230 63 3 chrX 118600336 118600667 -48049629 + Lx9 LINE L1 7287 7637 -7 1 1489 454 304 44 49 chrX 118601023 118601123 -48049173 + B3 SINE B2 4 101 -115 1 1489 570 29 0 0 chrX 118601123 118601191 -48049105 + (TA)n Simple_repeat Simple_repeat 1 68 0 1 1489 454 304 44 49 chrX 118601191 118601294 -48049002 + B3 SINE B2 102 206 -10 1 1489 21 36 0 0 chrX 118601311 118601339 -48048957 + AT_rich Low_complexity Low_complexity 1 28 0 1 1489 301 347 50 22 chrX 118601689 118601869 -48048427 - L1M5 LINE L1 -1089 5057 4873 1 1489 2967 86 2 2 chrX 118602211 118602607 -48047689 + MTA_Mm LTR MaLR 1 396 0 1 1489 310 301 11 0 chrX 118602958 118603051 -48047245 + Lx8 LINE L1 7010 7103 -370 1 1489 338 256 26 0 chrX 118603086 118603164 -48047132 + Lx8 LINE L1 7214 7293 -180 1 1489 306 305 19 9 chrX 118603707 118603813 -48046483 + L1M4b LINE L1 1467 1573 -5761 1 1489 5581 146 15 2 chrX 118603837 118604614 -48045682 + L1_Mus4 LINE L1 404 1191 -5466 1 1489 379 0 0 38 chrX 118604614 118604667 -48045629 + (CAAAA)n Simple_repeat Simple_repeat 5 55 0 1 1489 14939 199 138 10 chrX 118604667 118608007 -48042289 + L1_Mus4 LINE L1 1192 5078 -805 1 1489 2350 65 168 0 chrX 118608007 118608359 -48041937 + IAPLTR2a LTR ERVK 1 411 0 1 1489 14939 139 54 5 chrX 118608359 118609902 -48040394 + L1_Mus4 LINE L1 5079 6631 -5 1 1489 428 278 0 0 chrX 118610074 118610171 -48040125 + PB1D10 SINE Alu 9 105 -12 1 1489 698 87 10 0 chrX 118610213 118610316 -48039980 + (TC)n Simple_repeat Simple_repeat 1 104 0 1 1489 212 333 40 45 chrX 118611397 118611598 -48038698 - MIRb SINE MIR -58 210 11 1 1489 827 140 0 7 chrX 118612141 118612285 -48038011 + (TTTC)n Simple_repeat Simple_repeat 2 144 0 1 1489 25515 146 17 85 chrX 118612579 118614372 -48035924 - L1_Mus2 LINE L1 0 6566 4837 1 1489 2015 151 71 4 chrX 118614372 118614790 -48035506 + RLTR44D LTR ERVK 1 452 0 1 1489 25515 146 17 85 chrX 118614790 118619489 -48030807 - L1_Mus2 LINE L1 0 4836 300 1 1489 228 234 0 0 chrX 118619746 118619793 -48030503 + L1VL1 LINE L1 79 125 -6297 1 1490 572 40 13 0 chrX 118620301 118620376 -48029920 + (TTTC)n Simple_repeat Simple_repeat 2 77 0 1 1490 234 0 0 0 chrX 118620759 118620785 -48029511 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1490 423 98 0 0 chrX 118620785 118620846 -48029450 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 1490 37789 45 0 3 chrX 118623309 118629682 -48020614 - L1Md_T LINE L1 0 6585 135 1 1490 22 0 0 0 chrX 118631446 118631468 -48018828 + AT_rich Low_complexity Low_complexity 1 22 0 1 1490 23 78 0 0 chrX 118631554 118631605 -48018691 + AT_rich Low_complexity Low_complexity 1 51 0 1 1490 211 216 29 49 chrX 118631963 118632065 -48018231 + (TATATG)n Simple_repeat Simple_repeat 3 102 0 1 1490 968 352 127 6 chrX 118632100 118632626 -48017670 - MLT2F LTR ERVL -71 592 3 1 1490 342 0 0 0 chrX 118633822 118633860 -48016436 + (A)n Simple_repeat Simple_repeat 1 38 0 1 1490 265 250 32 11 chrX 118634615 118634708 -48015588 + L1MA5 LINE L1 6179 6273 -27 1 1490 350 311 23 64 chrX 118634764 118634936 -48015360 - Lx9 LINE L1 -486 7158 6994 1 1490 896 276 20 17 chrX 118634925 118635224 -48015072 - Lx9 LINE L1 -275 7369 7070 1 1490 256 356 58 11 chrX 118635337 118635527 -48014769 - Lx9 LINE L1 -635 7009 6811 1 1490 20425 125 19 6 chrX 118636042 118637418 -48012878 - L1_Mus3 LINE L1 -2 6636 5236 1 1490 360 0 0 0 chrX 118637418 118637458 -48012838 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 1490 20425 157 24 25 chrX 118637458 118638293 -48012003 - L1_Mus3 LINE L1 -648 5235 4401 1 1490 1956 154 5 27 chrX 118638293 118638661 -48011635 + L1_Mus3 LINE L1 6276 6635 -3 1 1490 20425 157 24 25 chrX 118638661 118641069 -48009227 - L1_Mus3 LINE L1 -1483 4400 2002 1 1490 810 156 0 0 chrX 118641065 118641200 -48009096 - L1VL4 LINE L1 -5569 733 599 1 1490 18045 144 36 29 chrX 118641212 118645325 -48004971 - L1_Mus3 LINE L1 -1 6637 2499 1 1490 343 302 31 19 chrX 118645457 118645619 -48004677 - L1_Mus3 LINE L1 -5778 838 675 1 1490 252 0 0 0 chrX 118645828 118645856 -48004440 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 1490 405 0 0 0 chrX 118645856 118645900 -48004396 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1490 403 372 35 18 chrX 118646105 118646387 -48003909 + Lx9 LINE L1 6634 6920 -724 1 1490 303 294 48 27 chrX 118646392 118646539 -48003757 - L1_Mur3 LINE L1 -1517 4363 4214 1 1490 4728 150 24 2 chrX 118646618 118647412 -48002884 + Lx3B LINE L1 6161 6971 -2 1 1490 1280 186 14 42 chrX 118647467 118647754 -48002542 - L1_Mur3 LINE L1 -1781 4099 3821 1 1490 535 280 56 56 chrX 118647947 118648305 -48001991 + Lx8 LINE L1 5535 5923 -1550 1 1490 23 0 0 0 chrX 118648451 118648474 -48001822 + AT_rich Low_complexity Low_complexity 1 23 0 1 1490 5756 179 31 20 chrX 118649898 118651001 -47999295 + Lx2B LINE L1 5862 6978 -22 1 1490 495 0 0 0 chrX 118651001 118651056 -47999240 + (TAA)n Simple_repeat Simple_repeat 3 57 0 1 1490 5756 179 31 20 chrX 118651056 118651068 -47999228 + Lx2B LINE L1 6979 6990 -10 1 1490 410 345 95 67 chrX 118651300 118651657 -47998639 - RLTR26 LTR ERVK -181 461 95 1 1490 216 167 0 0 chrX 118651906 118651942 -47998354 + MIR SINE MIR 3 38 -224 1 1490 22 0 0 0 chrX 118652143 118652165 -47998131 + AT_rich Low_complexity Low_complexity 1 22 0 1 1490 425 256 98 36 chrX 118652225 118652522 -47997774 + L1M4b LINE L1 1924 2238 -5096 1 1490 574 214 509 43 chrX 118652565 118652732 -47997564 + ORR1D1 LTR MaLR 1 245 -139 1 1490 772 69 8 8 chrX 118652732 118652849 -47997447 + (TC)n Simple_repeat Simple_repeat 2 118 0 1 1490 404 214 0 23 chrX 118652849 118652927 -47997369 + ORR1D1 LTR MaLR 246 322 -62 1 1490 609 320 116 23 chrX 118653165 118653466 -47996830 - RLTR17 LTR ERVK -248 444 116 1 1490 290 180 82 0 chrX 118653497 118653558 -47996738 + ORR1D1 LTR MaLR 313 378 0 1 1490 467 333 25 51 chrX 118653628 118653824 -47996472 + B3A SINE B2 2 192 -6 1 1490 195 69 0 0 chrX 118654215 118654244 -47996052 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1 1490 762 78 0 0 chrX 118654244 118654347 -47995949 - B1_Mus1 SINE Alu -44 104 2 1 1490 346 286 28 37 chrX 118654809 118654918 -47995378 + RSINE1 SINE B4 23 130 -35 1 1490 594 82 0 0 chrX 118655707 118655792 -47994504 + (CA)n Simple_repeat Simple_repeat 1 85 0 1 1490 269 299 106 53 chrX 118655792 118655905 -47994391 - RSINE1 SINE B4 -39 126 8 1 1490 208 0 0 59 chrX 118655916 118655950 -47994346 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1 1490 16713 33 1 1 chrX 118656415 118658453 -47991843 + L1_Mm LINE L1 2841 4880 -1003 1 1490 7486 154 180 1 chrX 118658453 118659977 -47990319 + L1_Mur2 LINE L1 3784 5580 -297 1 1490 8255 41 1 0 chrX 118659977 118660971 -47989325 + L1Md_T LINE L1 5587 6581 -1 1 1490 9904 123 11 37 chrX 118660998 118662748 -47987548 - L1_Mur1 LINE L1 -2575 3311 1607 1 1490 1371 201 42 28 chrX 118662748 118663102 -47987194 + RLTR10D LTR ERVK 1 359 0 1 1490 387 179 104 78 chrX 118663106 118663221 -47987075 + IAP-d-int LTR ERVK 5 122 -6420 1 1490 227 140 60 0 chrX 118663221 118663271 -47987025 - L1_Mur1 LINE L1 -4081 1805 1753 1 1490 1911 242 7 0 chrX 118663283 118663717 -47986579 + IAP-d-int LTR ERVK 1751 2187 -4355 1 1490 1896 120 3 92 chrX 118663727 118664085 -47986211 - IAPLTR1a_Mm LTR ERVK -11 326 1 1 1490 40518 12 3 12 chrX 118664085 118670613 -47979683 - IAPEz-int LTR ERVK 0 6481 1 1 1490 1896 120 3 92 chrX 118670614 118670972 -47979324 - IAPLTR1a_Mm LTR ERVK -11 326 1 1 1490 10103 261 21 15 chrX 118670976 118673940 -47976356 + IAP-d-int LTR ERVK 2195 5176 -1366 1 1490 2181 233 12 25 chrX 118673928 118674522 -47975774 + IAP-d-int LTR ERVK 5474 6059 -483 1 1490 2141 172 18 11 chrX 118674562 118674943 -47975353 + IAP-d-int LTR ERVK 6159 6542 0 1 1490 720 165 35 35 chrX 118674943 118675087 -47975209 + RLTR10D LTR ERVK 1 144 -215 1 1490 2717 128 13 3 chrX 118675087 118675730 -47974566 - L1_Mur1 LINE L1 -4495 1391 676 1 1490 425 256 226 0 chrX 118676431 118676595 -47973701 - L1_Mur1 LINE L1 -6572 412 212 1 1490 217 286 0 0 chrX 118676884 118676933 -47973363 + B3A SINE B2 5 53 -145 1 1490 234 125 0 0 chrX 118676933 118676981 -47973315 + (A)n Simple_repeat Simple_repeat 1 48 0 1 1490 400 344 41 8 chrX 118676984 118677107 -47973189 + B3A SINE B2 56 182 -16 1 1490 275 150 0 16 chrX 118677144 118677205 -47973091 + GA-rich Low_complexity Low_complexity 1 60 0 1 1490 324 326 117 21 chrX 118677280 118677468 -47972828 - L1MC1 LINE L1 -60 6273 6068 1 1490 554 251 40 85 chrX 118677946 118678146 -47972150 - ORR1C2 LTR MaLR -191 193 3 1 1490 317 317 70 39 chrX 118678250 118678480 -47971816 - L1MCa LINE L1 -4834 1674 1438 1 1490 902 224 56 6 chrX 118678606 118678777 -47971519 - Lx9 LINE L1 -4 7640 7437 1 1490 585 0 0 0 chrX 118678777 118678842 -47971454 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 1490 902 305 76 3 chrX 118678842 118679131 -47971165 - Lx9 LINE L1 -208 7436 7123 1 1490 744 267 21 49 chrX 118679186 118679470 -47970826 - Lx9 LINE L1 -1 7643 7368 1 1490 186 43 0 0 chrX 118679542 118679565 -47970731 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1490 972 118 0 0 chrX 118679565 118679700 -47970596 - B1_Mus1 SINE Alu -9 139 5 1 1490 514 348 80 30 chrX 118679796 118680133 -47970163 - L1MCa LINE L1 -5367 1141 780 1 1490 2002 182 146 70 chrX 118680133 118680660 -47969636 + RMER2 LTR ERV1 1 567 0 1 1490 514 348 80 30 chrX 118680660 118680687 -47969609 - L1MCa LINE L1 -5729 779 759 1 1490 212 77 0 25 chrX 118681154 118681194 -47969102 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1490 189 0 0 0 chrX 118681316 118681337 -47968959 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1 1490 2357 78 9 9 chrX 118682952 118683289 -47967007 + BGLII LTR ERVK 1 337 -84 1 1490 1903 122 23 0 chrX 118683334 118683639 -47966657 - L1_Mus3 LINE L1 -34 6604 6293 2 1490 22 35 0 0 chrX 118683641 118683670 -47966626 + AT_rich Low_complexity Low_complexity 1 29 0 2 1490 22 35 0 0 chrX 118683715 118683744 -47966552 + AT_rich Low_complexity Low_complexity 1 29 0 2 1490 198 0 0 0 chrX 118684388 118684410 -47965886 + (TC)n Simple_repeat Simple_repeat 1 22 0 2 1490 261 0 0 0 chrX 118684410 118684438 -47965858 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1490 242 164 18 0 chrX 118684438 118684493 -47965803 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1490 260 325 0 16 chrX 118684544 118684666 -47965630 - Lx9 LINE L1 -206 7438 7319 2 1490 599 34 34 0 chrX 118684838 118684926 -47965370 - L1Md_F3 LINE L1 -3 6581 6491 2 1490 30 27 0 0 chrX 118684926 118684963 -47965333 + AT_rich Low_complexity Low_complexity 1 37 0 2 1490 211 370 0 14 chrX 118685318 118685392 -47964904 + MIRb SINE MIR 34 106 -162 2 1490 336 382 14 22 chrX 118687076 118687215 -47963081 - RSINE1 SINE B4 0 165 28 2 1490 256 301 0 27 chrX 118687885 118687960 -47962336 - RMER12 LTR ERVK -150 1172 1100 2 1490 598 64 0 0 chrX 118687990 118688068 -47962228 - L1_Mm LINE L1 -1191 4692 4615 2 1490 3349 130 87 28 chrX 118688068 118688645 -47961651 + Lx LINE L1 6038 6648 -6 2 1490 233 0 0 59 chrX 118688657 118688691 -47961605 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 2 1490 621 0 0 0 chrX 118688798 118688867 -47961429 + (GA)n Simple_repeat Simple_repeat 2 70 0 2 1490 8812 112 25 27 chrX 118688982 118689963 -47960333 - Lx3_Mus LINE L1 -6 7003 6038 2 1490 507 33 0 0 chrX 118689963 118690024 -47960272 + (TCCC)n Simple_repeat Simple_repeat 4 64 0 2 1490 8812 112 25 27 chrX 118690024 118690125 -47960171 - Lx3_Mus LINE L1 -972 6037 5926 2 1490 234 0 0 0 chrX 118690125 118690151 -47960145 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 1490 18506 179 37 50 chrX 118690151 118692750 -47957546 - Lx3_Mus LINE L1 -1084 5925 3323 2 1490 2798 139 18 0 chrX 118692750 118693196 -47957100 + L1_Mus3 LINE L1 6182 6635 -3 2 1490 18506 189 39 53 chrX 118693196 118693565 -47956731 - Lx3_Mus LINE L1 -2564 3322 2945 2 1490 7106 92 8 15 chrX 118693565 118694565 -47955731 + L1Md_F2 LINE L1 5587 6579 -3 2 1490 18506 189 39 53 chrX 118694565 118695200 -47955096 - Lx3_Mus LINE L1 -2942 2944 2416 2 1490 580 289 63 114 chrX 118695200 118695630 -47954666 - RMER17C LTR ERVK 0 410 3 2 1490 18506 189 39 53 chrX 118695630 118696046 -47954250 - Lx3_Mus LINE L1 -3471 2415 1970 2 1490 212 59 29 0 chrX 118696046 118696080 -47954216 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1490 18506 171 38 40 chrX 118696080 118697918 -47952378 - Lx3_Mus LINE L1 -3917 1969 124 2 1490 3467 167 30 24 chrX 118697933 118698572 -47951724 - RMER17C-int LTR ERVK -10 3228 2586 2 1490 278 136 23 0 chrX 118698572 118698616 -47951680 + LSU-rRNA_Hsa rRNA rRNA 4202 4246 -789 2 1490 469 106 10 96 chrX 118698619 118698723 -47951573 - RMER17C-int LTR ERVK -702 2536 2442 2 1490 35338 35 0 0 chrX 118698818 118704464 -47945832 + L1Md_T LINE L1 1 5589 -297 2 1490 8984 5 0 0 chrX 118704464 118705460 -47944836 + L1Md_T LINE L1 5590 6585 0 2 1490 1483 245 54 95 chrX 118705661 118706270 -47944026 - RMER17C-int LTR ERVK -2654 584 1 2 1490 866 259 83 33 chrX 118706291 118706463 -47943833 - RMER17C LTR ERVK -32 378 206 2 1490 468 51 0 0 chrX 118706463 118706522 -47943774 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 1490 866 259 83 33 chrX 118706522 118706709 -47943587 - RMER17C LTR ERVK -205 205 1 2 1490 450 294 79 40 chrX 118707227 118707454 -47942842 - RLTR15 LTR ERVK -79 280 45 2 1490 1448 157 4 8 chrX 118707527 118707784 -47942512 + RMER6-int LTR ERVK 257 512 -2665 2 1490 4677 189 14 9 chrX 118707840 118708023 -47942273 + RMER6-int LTR ERVK 488 668 -2509 2 1490 228 35 0 0 chrX 118708023 118708052 -47942244 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1490 4677 189 14 9 chrX 118708052 118708785 -47941511 + RMER6-int LTR ERVK 669 1408 -1769 2 1490 1605 286 87 46 chrX 118708785 118709350 -47940946 - Lx6 LINE L1 -64 7396 6809 2 1490 366 332 62 37 chrX 118709379 118709623 -47940673 - L1M4 LINE L1 -1477 4669 4420 2 1490 1426 295 42 46 chrX 118709660 118710491 -47939805 + L1_Rod LINE L1 3798 4625 -1222 2 1490 5984 101 7 6 chrX 118711335 118712280 -47938016 - MusHAL1 LINE L1 -1639 1073 128 2 1490 180 0 0 0 chrX 118712290 118712310 -47937986 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 1490 734 299 73 42 chrX 118712397 118712957 -47937339 - L1M4 LINE L1 -1009 5137 4564 2 1490 1528 203 21 50 chrX 118712957 118713335 -47936961 - ORR1B2 LTR MaLR 0 367 1 2 1490 734 299 73 42 chrX 118713335 118713482 -47936814 - L1M4 LINE L1 -1583 4563 4408 2 1490 5197 226 27 9 chrX 118713842 118715028 -47935268 - Lx2B LINE L1 0 7000 5794 2 1490 3805 218 76 47 chrX 118715025 118716206 -47934090 + Lx6 LINE L1 4051 5265 -615 2 1490 4691 206 58 12 chrX 118716224 118717310 -47932986 - Lx2B LINE L1 -5 7053 5799 2 1490 4194 264 92 33 chrX 118717305 118719087 -47931209 + Lx6 LINE L1 5314 7203 -257 2 1490 9392 177 37 11 chrX 118719083 118721840 -47928456 - Lx LINE L1 -6 6648 3854 2 1490 10228 144 51 13 chrX 118721840 118724540 -47925756 + L1_Mus3 LINE L1 3828 6638 0 2 1490 2572 322 87 26 chrX 118724543 118725688 -47924608 - RMER1C Other Other -117 1225 11 2 1490 719 100 9 0 chrX 118726275 118726385 -47923911 + (TC)n Simple_repeat Simple_repeat 2 112 0 2 1490 2705 185 30 21 chrX 118726391 118726922 -47923374 - Lx4A LINE L1 -7 7051 6516 2 1490 224 159 0 55 chrX 118727502 118727575 -47922721 + T-rich Low_complexity Low_complexity 2 70 0 2 1490 222 208 0 0 chrX 118728009 118728062 -47922234 + CT-rich Low_complexity Low_complexity 3 55 0 2 1490 753 200 7 0 chrX 118728068 118728203 -47922093 - B1_Mur4 SINE Alu -12 138 3 2 1490 21 36 0 0 chrX 118728610 118728638 -47921658 + AT_rich Low_complexity Low_complexity 1 28 0 2 1490 669 328 108 26 chrX 118728811 118729118 -47921178 + MTD LTR MaLR 74 405 -14 2 1490 25 0 0 0 chrX 118729433 118729458 -47920838 + AT_rich Low_complexity Low_complexity 1 25 0 2 1490 705 290 116 24 chrX 118729612 118729905 -47920391 + ORR1D1 LTR MaLR 55 374 0 2 1490 38 0 0 0 chrX 118732219 118732257 -47918039 + AT_rich Low_complexity Low_complexity 1 38 0 2 1490 26025 58 1 1 chrX 118732261 118736297 -47913999 - L1Md_F2 LINE L1 -5 6577 2544 2 1490 267 133 44 0 chrX 118736281 118736326 -47913970 + L1_Mm LINE L1 2412 2458 -3425 2 1490 288 240 38 19 chrX 118737218 118737324 -47912972 - L1M2 LINE L1 -502 5789 5682 2 1490 1808 180 112 20 chrX 118737366 118737403 -47912893 - BGLII_B LTR ERVK -1 440 403 2 1490 189 0 0 0 chrX 118737403 118737424 -47912872 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1490 1808 180 112 20 chrX 118737424 118737789 -47912507 - BGLII_B LTR ERVK -39 402 2 2 1490 5093 185 50 26 chrX 118737789 118738778 -47911518 - MYSERV16_I-int LTR ERVK 0 2326 1316 2 1490 1082 82 7 7 chrX 118738778 118738925 -47911371 - B1_Mus1 SINE Alu -1 147 1 2 1490 5093 185 50 26 chrX 118738925 118739196 -47911100 - MYSERV16_I-int LTR ERVK -1011 1315 1036 2 1490 256 336 83 30 chrX 118739198 118739330 -47910966 - RMER4A LTR ERVK -42 424 286 2 1490 891 242 67 82 chrX 118739330 118739731 -47910565 - MYSERV16_I-int LTR ERVK -1431 895 501 2 1490 546 160 0 0 chrX 118739743 118739838 -47910458 + T-rich Low_complexity Low_complexity 6 100 0 2 1490 1132 101 6 6 chrX 118739838 118740017 -47910279 + (TTC)n Simple_repeat Simple_repeat 2 180 0 2 1490 23124 114 16 16 chrX 118740043 118744871 -47905425 - Lx3_Mus LINE L1 -21 6988 2161 2 1490 204 40 0 0 chrX 118745031 118745056 -47905240 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1490 398 88 112 0 chrX 118745884 118745964 -47904332 + Lx3_Mus LINE L1 6913 7001 -8 2 1490 747 308 14 32 chrX 118746174 118746392 -47903904 - B3 SINE B2 -2 214 1 2 1490 239 246 15 15 chrX 118746404 118746470 -47903826 + GA-rich Low_complexity Low_complexity 4 69 0 2 1490 189 171 86 0 chrX 118746473 118746508 -47903788 - MIRm SINE MIR -139 137 100 2 1490 515 358 77 20 chrX 118746555 118746854 -47903442 - Lx8 LINE L1 -161 7312 6997 2 1490 8132 147 10 35 chrX 118746886 118747053 -47903243 - Lx3A LINE L1 -10 6971 6834 2 1490 423 0 0 0 chrX 118747053 118747100 -47903196 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 1490 3531 85 4 0 chrX 118747105 118747574 -47902722 - L1_Mus1 LINE L1 -2 6565 6095 2 1490 8132 143 7 27 chrX 118747574 118748991 -47901305 - Lx3A LINE L1 -148 6833 5420 2 1490 6540 123 12 71 chrX 118748994 118750209 -47900087 + Lx3A LINE L1 4275 5418 -468 2 1490 1464 298 45 31 chrX 118750257 118750443 -47899853 - Lx8 LINE L1 -547 6926 6730 2 1490 1043 222 5 0 chrX 118750443 118750664 -47899632 - URR1B DNA MER1_type -3 222 1 2 1490 1464 298 45 31 chrX 118750664 118751056 -47899240 - Lx8 LINE L1 -744 6729 6340 2 186 2193 75 6 13 chrX 118751105 118751417 -47898879 - L1_Mus2 LINE L1 0 6566 6257 2 1491 687 164 0 0 chrX 118751582 118751710 -47898586 + (TA)n Simple_repeat Simple_repeat 2 129 0 2 1491 1091 76 21 0 chrX 118751763 118751908 -47898388 + B1_Mus1 SINE Alu 1 148 0 2 1491 206 75 50 0 chrX 118751908 118751948 -47898348 + (CAAAAA)n Simple_repeat Simple_repeat 6 47 0 2 1491 517 67 0 0 chrX 118752366 118752441 -47897855 - L1_Mus3 LINE L1 -12 6554 6480 2 1491 234 91 0 0 chrX 118753501 118753534 -47896762 + (TAAAA)n Simple_repeat Simple_repeat 5 37 0 2 1491 1542 133 8 28 chrX 118753572 118753819 -47896477 - L1_Mus3 LINE L1 -315 6323 6082 2 1491 465 94 180 40 chrX 118753810 118753910 -47896386 + Lx LINE L1 6528 6641 -13 2 1491 639 201 0 0 chrX 118754167 118754306 -47895990 + (TA)n Simple_repeat Simple_repeat 1 139 0 2 1491 1210 292 76 54 chrX 118754896 118755642 -47894654 - MER45R DNA Tip100 0 1581 819 2 1491 5752 61 13 16 chrX 118756140 118756903 -47893393 + L1Md_F2 LINE L1 5822 6582 0 2 1491 217 211 0 0 chrX 118758049 118758087 -47892209 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1491 416 101 0 25 chrX 118758088 118758169 -47892127 + (CAGAGA)n Simple_repeat Simple_repeat 6 84 0 2 1491 498 332 88 27 chrX 118758192 118758419 -47891877 - Lx9 LINE L1 -216 7428 7197 2 1491 549 80 0 0 chrX 118758419 118758494 -47891802 + (TA)n Simple_repeat Simple_repeat 2 76 0 2 1491 536 289 54 55 chrX 118758494 118758987 -47891309 - Lx9 LINE L1 -448 7196 6591 2 1491 1173 212 33 43 chrX 118758996 118759272 -47891024 + RLTR46 LTR ERVK 42 314 -6 2 1491 365 194 0 0 chrX 118759379 118759446 -47890850 + ORR1C2 LTR MaLR 3 69 -315 2 1491 767 225 27 98 chrX 118759426 118759669 -47890627 + RMER12 LTR ERVK 113 355 -1493 2 1491 276 299 38 0 chrX 118759654 118759767 -47890529 + RMER12 LTR ERVK 447 613 -791 2 1491 9957 207 31 28 chrX 118760005 118762786 -47887510 + L1VL4 LINE L1 925 3709 -2177 2 1491 573 215 0 7 chrX 118762811 118762947 -47887349 + Lx2 LINE L1 3894 4028 -1852 2 1491 3400 110 8 15 chrX 118763005 118763523 -47886773 + L1_Mus2 LINE L1 6052 6565 -1 2 1491 621 263 187 26 chrX 118763559 118763740 -47886556 - RMER19B LTR ERVK -328 574 369 2 1491 4018 178 116 27 chrX 118763740 118764620 -47885676 - RMER17B LTR ERVK 0 958 1 2 1491 621 263 187 26 chrX 118764620 118764668 -47885628 - RMER19B LTR ERVK -534 368 308 2 1491 2005 193 31 2 chrX 118764682 118765107 -47885189 + Lx2 LINE L1 4015 4451 -1426 2 1491 5613 126 25 8 chrX 118765109 118766636 -47883660 + L1VL4 LINE L1 195 1754 -1805 2 1491 6366 152 7 22 chrX 118766635 118767953 -47882343 + Lx2 LINE L1 5346 6645 -352 2 1491 605 183 10 0 chrX 118767942 118768046 -47882250 + Lx2 LINE L1 6765 6869 -128 2 1491 1848 187 139 35 chrX 118769032 118769514 -47880782 + RMER17C-int LTR ERVK 1485 2016 -1222 2 1491 538 194 0 0 chrX 118769513 118769616 -47880680 + RMER17C-int LTR ERVK 2170 2272 -966 2 1491 1762 146 266 26 chrX 118769623 118769866 -47880430 + RMER17C-int LTR ERVK 2581 2899 -339 2 1491 414 0 0 0 chrX 118769866 118769912 -47880384 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1491 1762 180 93 32 chrX 118769912 118770246 -47880050 + RMER17C-int LTR ERVK 2900 3237 -1 2 1491 1496 194 41 84 chrX 118770250 118770478 -47879818 + RMER17C LTR ERVK 16 402 -556 2 1491 1169 52 7 0 chrX 118770478 118770631 -47879665 + (TTC)n Simple_repeat Simple_repeat 3 156 0 2 1491 1496 183 37 82 chrX 118770631 118770855 -47879441 + RMER17C LTR ERVK 185 402 -8 2 1491 5323 225 25 23 chrX 118770877 118772399 -47877897 + Lx2B LINE L1 5478 6995 -5 2 1491 226 237 110 30 chrX 118772408 118772508 -47877788 + RMER12B LTR ERVK 694 801 -521 3 1491 322 191 55 146 chrX 118772571 118772681 -47877615 + RMER12B LTR ERVK 1162 1261 -143 3 1491 235 198 182 131 chrX 118772744 118772843 -47877453 + RMER12 LTR ERVK 978 1081 -241 3 1491 435 306 8 47 chrX 118772895 118773022 -47877274 + RMER12 LTR ERVK 1096 1217 -105 3 1491 293 268 21 0 chrX 118773274 118773396 -47876900 + L1_Mur3 LINE L1 5306 5456 -424 3 1491 511 84 0 0 chrX 118773393 118773464 -47876832 - L1_Mus2 LINE L1 -392 6174 6104 3 1491 3188 72 0 14 chrX 118773464 118773886 -47876410 + L1_Mus2 LINE L1 6151 6566 0 3 1491 600 289 39 26 chrX 118773889 118774123 -47876173 + L1_Rod LINE L1 5421 5657 -190 3 1491 1208 203 106 25 chrX 118774124 118774436 -47875860 + ORR1C2 LTR MaLR 1 384 0 3 1491 3554 264 67 37 chrX 118774436 118775764 -47874532 + ORR1C2-int LTR MaLR 1 1368 -2 3 1491 962 258 138 21 chrX 118775793 118776082 -47874214 + ORR1C2 LTR MaLR 61 383 -1 3 1491 240 273 13 25 chrX 118776083 118776162 -47874134 + L1_Mur3 LINE L1 5655 5732 -115 3 1491 881 261 5 0 chrX 118776168 118776363 -47873933 + Lx9 LINE L1 6534 6729 -915 3 1491 1973 199 55 30 chrX 118776632 118777004 -47873292 + MTC LTR MaLR 1 387 -34 3 1491 391 60 30 0 chrX 118777004 118777071 -47873225 + (TTTG)n Simple_repeat Simple_repeat 4 72 0 3 1491 1973 199 55 30 chrX 118777071 118777101 -47873195 + MTC LTR MaLR 388 413 -8 3 1491 516 300 120 44 chrX 118777886 118778294 -47872002 - L1MEc LINE L1 -4916 1484 1046 3 1491 23 33 0 0 chrX 118778321 118778351 -47871945 + AT_rich Low_complexity Low_complexity 1 30 0 3 1491 253 279 111 57 chrX 118778354 118778669 -47871627 - L1MEc LINE L1 -5474 926 595 3 1491 8004 180 10 12 chrX 118778932 118780510 -47869786 - L1_Mur2 LINE L1 -670 5207 3633 3 1491 20720 104 153 19 chrX 118780528 118784908 -47865388 + L1_Mus2 LINE L1 1600 6566 0 3 1491 311 0 0 25 chrX 118785232 118785272 -47865024 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 3 1491 969 360 40 21 chrX 118785545 118785751 -47864545 - MTE-int LTR MaLR -171 1409 1199 3 1491 3605 149 24 42 chrX 118785751 118786516 -47863780 - RMER17A LTR ERVK 0 751 1 3 1491 969 360 40 21 chrX 118786516 118786729 -47863567 - MTE-int LTR MaLR -382 1198 982 3 1491 2395 179 72 25 chrX 118786980 118787758 -47862538 - Lx4B LINE L1 -974 6084 5276 3 1491 5654 89 8 5 chrX 118787868 118788666 -47861630 - L1Md_F2 LINE L1 0 6582 5783 3 1491 7366 46 0 15 chrX 118788671 118788766 -47861530 - L1Md_F3 LINE L1 0 6584 6535 3 1491 3452 23 2 0 chrX 118788766 118789161 -47861135 + MTA_Mm LTR MaLR 1 396 0 3 1491 9354 26 2 0 chrX 118789161 118790257 -47860039 + MTA_Mm-int LTR MaLR 1 1098 0 3 1491 3459 18 2 0 chrX 118790257 118790650 -47859646 + MTA_Mm LTR MaLR 1 394 -2 3 1491 32501 90 2 23 chrX 118790650 118796701 -47853595 - L1Md_F3 LINE L1 -50 6534 615 3 1491 432 0 0 0 chrX 118796862 118796910 -47853386 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1491 1883 185 11 62 chrX 118797051 118797420 -47852876 - ORR1B1 LTR MaLR -4 390 41 3 1491 326 351 30 15 chrX 118797457 118797590 -47852706 - B4 SINE B4 -144 148 14 3 1491 251 341 37 52 chrX 118797610 118797746 -47852550 - B1F1 SINE Alu -3 146 13 3 1491 25 51 0 0 chrX 118797958 118797997 -47852299 + AT_rich Low_complexity Low_complexity 1 39 0 3 1491 5221 158 52 11 chrX 118798170 118799136 -47851160 - Lx LINE L1 -3 6651 5647 3 1491 1464 108 0 0 chrX 118799147 118799351 -47850945 + L1_Mus4 LINE L1 5960 6163 -473 3 1491 1154 315 47 46 chrX 118799376 118800034 -47850262 + Lx9 LINE L1 6859 7517 -127 3 1491 330 132 0 0 chrX 118800035 118800088 -47850208 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 1491 1765 209 8 7 chrX 118800908 118801265 -47849031 - ORR1A3 LTR MaLR -17 357 1 3 1491 24 53 0 0 chrX 118801285 118801323 -47848973 + AT_rich Low_complexity Low_complexity 1 38 0 3 1491 1305 211 103 89 chrX 118801820 118802169 -47848127 - ORR1B1 LTR MaLR 0 394 41 3 1491 1444 252 47 3 chrX 118802260 118802622 -47847674 - ORR1C1 LTR MaLR 0 378 1 3 1491 480 384 77 13 chrX 118803177 118803475 -47846821 - MLT1F LTR MaLR -91 457 141 3 1491 1507 152 24 8 chrX 118804098 118804350 -47845946 + Lx2 LINE L1 6141 6396 -601 3 1491 234 167 60 15 chrX 118804341 118804408 -47845888 + Lx2 LINE L1 6908 6977 -20 3 1491 405 0 0 0 chrX 118804418 118804463 -47845833 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 3 1491 3531 155 31 3 chrX 118804463 118805045 -47845251 + Lx2 LINE L1 6390 6987 -10 3 1491 336 48 0 0 chrX 118805047 118805089 -47845207 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 1491 3420 215 204 32 chrX 118805109 118806247 -47844049 + Lx4B LINE L1 1587 2920 -2957 3 1491 195 42 0 0 chrX 118806253 118806277 -47844019 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1491 554 190 336 41 chrX 118806279 118806690 -47843606 + Lx4B LINE L1 3536 4067 -1810 3 1491 5353 196 63 72 chrX 118806692 118806879 -47843417 + Lx4B LINE L1 4235 4409 -1468 3 1491 540 0 0 0 chrX 118806879 118806939 -47843357 + (CAAAA)n Simple_repeat Simple_repeat 3 62 0 3 1491 5353 196 63 72 chrX 118806939 118807179 -47843117 + Lx4B LINE L1 4410 4586 -1291 3 1491 274 23 23 23 chrX 118807179 118807223 -47843073 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 3 1491 2107 140 41 0 chrX 118807223 118807565 -47842731 - Lx3B LINE L1 -10 6963 6608 3 1491 5353 196 63 72 chrX 118807565 118808236 -47842060 + Lx4B LINE L1 4587 5273 -604 3 1491 297 0 0 0 chrX 118808236 118808269 -47842027 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 3 1491 5353 196 63 72 chrX 118808269 118808647 -47841649 + Lx4B LINE L1 5274 5700 -177 3 1491 4334 193 51 1 chrX 118808650 118809520 -47840776 + Lx4B LINE L1 5842 6754 -304 3 1491 3306 136 41 6 chrX 118809552 118810092 -47840204 - Lx2A LINE L1 -2 7006 6448 3 1491 263 146 0 0 chrX 118810093 118810134 -47840162 - Lx2A LINE L1 -518 6490 6450 3 1491 1452 186 10 30 chrX 118810147 118810446 -47839850 + Lx4B LINE L1 6762 7054 -4 3 1491 4729 45 0 3 chrX 118810902 118811484 -47838812 + L1Md_F3 LINE L1 6004 6583 -1 3 1491 182 37 37 0 chrX 118811608 118811635 -47838661 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 1491 210 267 22 0 chrX 118811849 118811894 -47838402 - PB1D7 SINE Alu -73 47 2 3 1491 21 36 0 0 chrX 118811982 118812010 -47838286 + AT_rich Low_complexity Low_complexity 1 28 0 3 1491 992 83 7 40 chrX 118812894 118813045 -47837251 - B1_Mus1 SINE Alu -2 146 1 3 1491 1080 96 0 0 chrX 118813615 118813761 -47836535 + B1_Mus2 SINE Alu 2 147 0 3 1491 421 348 44 8 chrX 118813770 118813935 -47836361 + B3 SINE B2 27 198 0 3 1491 210 267 22 0 chrX 118814097 118814142 -47836154 + PB1D7 SINE Alu 2 47 -73 3 1491 884 342 115 12 chrX 118814247 118814741 -47835555 + Lx8 LINE L1 6491 7035 -438 3 1491 36 40 0 0 chrX 118815029 118815079 -47835217 + AT_rich Low_complexity Low_complexity 1 50 0 3 1491 579 265 68 0 chrX 118815369 118815516 -47834780 + Lx9 LINE L1 7052 7208 -436 3 1491 3683 279 24 2 chrX 118815568 118816444 -47833852 + Lx5 LINE L1 6155 7049 -1 3 1491 1644 207 92 10 chrX 118816494 118816909 -47833387 + Lx9 LINE L1 7196 7644 0 3 1491 21 0 0 0 chrX 118817579 118817600 -47832696 + AT_rich Low_complexity Low_complexity 1 21 0 3 1491 22 35 0 0 chrX 118818207 118818236 -47832060 + AT_rich Low_complexity Low_complexity 1 29 0 3 1491 556 206 55 8 chrX 118818928 118818944 -47831352 + L1_Mur2 LINE L1 5742 5761 -116 3 1491 2906 120 7 13 chrX 118818944 118819391 -47830905 - L1_Mus3 LINE L1 -7 6631 6188 3 1491 2475 97 24 109 chrX 118819391 118819841 -47830455 + L1_Mus3 LINE L1 5768 6179 -457 3 1491 518 169 22 0 chrX 118819842 118819931 -47830365 + RMER6C LTR ERVK 1 91 -599 3 1491 14030 125 19 15 chrX 118819931 118822973 -47827323 + L1_Mus2 LINE L1 3511 6565 -1 3 1491 567 29 0 0 chrX 118823243 118823312 -47826984 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 1491 590 295 113 13 chrX 118823322 118823631 -47826665 + L1MC1 LINE L1 5994 6333 0 3 1491 247 155 35 23 chrX 118823708 118823794 -47826502 + (TATATG)n Simple_repeat Simple_repeat 6 92 0 3 1491 656 322 17 10 chrX 118824091 118824311 -47825985 + MTD LTR MaLR 16 239 -182 3 1491 1316 269 81 20 chrX 118824414 118824496 -47825800 - MTD LTR MaLR 0 419 336 3 1491 1025 214 23 0 chrX 118824496 118824716 -47825580 - URR1A DNA MER1_type 0 226 2 3 1491 1316 269 81 20 chrX 118824716 118825028 -47825268 - MTD LTR MaLR -84 335 1 3 1491 239 54 0 26 chrX 118825054 118825092 -47825204 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 1491 33 0 0 0 chrX 118825214 118825247 -47825049 + AT_rich Low_complexity Low_complexity 1 33 0 3 1491 464 273 113 28 chrX 118825261 118825438 -47824858 + Lx8 LINE L1 6905 7096 -377 3 1491 23 0 0 0 chrX 118825459 118825482 -47824814 + AT_rich Low_complexity Low_complexity 1 23 0 3 1491 301 338 75 81 chrX 118825501 118825662 -47824634 - RSINE1 SINE B4 -1 164 5 3 1491 1766 311 129 19 chrX 118826216 118827662 -47822634 + RMER1A Other Other 13 1027 -3 3 1491 363 23 0 0 chrX 118827706 118827750 -47822546 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1491 21 0 0 0 chrX 118827827 118827848 -47822448 + AT_rich Low_complexity Low_complexity 1 21 0 3 1491 1547 198 161 22 chrX 118828009 118828412 -47821884 + RMER6B LTR ERVK 1 459 -2 3 1491 915 205 187 25 chrX 118828415 118828810 -47821486 + MYSERV6-int LTR ERVK 3 461 -8498 3 1491 394 270 10 10 chrX 118828810 118828911 -47821385 - RLTR19B LTR ERVK -11 704 604 3 1491 4440 175 169 30 chrX 118828921 118830360 -47819936 + RLTR19-int LTR ERVK 2 1639 -4498 3 1491 1639 183 27 92 chrX 118830367 118830855 -47819441 + RLTR19-int LTR ERVK 1846 2301 -3836 3 1491 207 0 0 0 chrX 118831331 118831354 -47818942 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1491 15592 183 18 17 chrX 118831803 118835947 -47814349 + L1VL4 LINE L1 789 4937 -949 3 1491 6732 114 13 7 chrX 118835951 118837377 -47812919 - L1_Mus3 LINE L1 -6 6632 5199 3 1491 1544 191 28 219 chrX 118837375 118837854 -47812442 + L1VL4 LINE L1 4946 5282 -595 3 1491 2934 52 0 117 chrX 118837854 118838314 -47811982 + L1Md_F3 LINE L1 6179 6584 0 3 1491 1544 191 28 219 chrX 118838314 118838557 -47811739 + L1VL4 LINE L1 5283 5530 -347 3 1491 5486 193 76 2 chrX 118838800 118839980 -47810316 - Lx2B LINE L1 -189 6811 5546 3 1491 441 0 0 0 chrX 118839980 118840029 -47810267 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1491 495 0 0 0 chrX 118840029 118840083 -47810213 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 1491 269 36 0 68 chrX 118840170 118840229 -47810067 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 3 1491 1222 48 7 0 chrX 118840231 118840377 -47809919 - B1_Mm SINE Alu 0 147 1 3 1491 24 32 0 0 chrX 118841083 118841114 -47809182 + AT_rich Low_complexity Low_complexity 1 31 0 3 1491 23 54 0 0 chrX 118841138 118841175 -47809121 + AT_rich Low_complexity Low_complexity 1 37 0 3 1491 6213 147 29 2 chrX 118841697 118843076 -47807220 + Lx2 LINE L1 5508 6998 -2 3 1491 25 0 0 0 chrX 118843230 118843255 -47807041 + AT_rich Low_complexity Low_complexity 1 25 0 3 1491 8973 158 38 7 chrX 118843391 118846293 -47804003 - Lx4A LINE L1 -4 7054 4055 3 1491 533 314 11 99 chrX 118846294 118846487 -47803809 + RMER17C LTR ERVK 1 177 -233 3 1491 627 39 0 0 chrX 118846487 118846565 -47803731 + (TC)n Simple_repeat Simple_repeat 1 78 0 3 1491 270 0 0 0 chrX 118846567 118846597 -47803699 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1491 533 314 11 99 chrX 118846597 118846672 -47803624 + RMER17C LTR ERVK 178 248 -162 3 1491 36239 32 1 0 chrX 118846672 118854148 -47796148 - L1Md_T LINE L1 -13 6572 1 3 1491 3475 155 21 25 chrX 118854177 118854267 -47796029 - L1_Mur2 LINE L1 -3906 1971 1883 3 1491 2802 86 0 3 chrX 118854267 118854640 -47795656 - L1_Mus2 LINE L1 -1 6565 6194 4 1491 4214 179 30 16 chrX 118854640 118856123 -47794173 - L1_Mur2 LINE L1 -3995 1882 379 3 1491 216 0 0 0 chrX 118856148 118856172 -47794124 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1491 4509 268 50 19 chrX 118856186 118857595 -47792701 - Lx5 LINE L1 -11 7039 5587 4 1491 7750 54 6 1 chrX 118857621 118859196 -47791100 - L1Md_F2 LINE L1 -3 6579 4993 4 1491 2711 259 38 9 chrX 118859190 118860013 -47790283 - Lx5 LINE L1 -314 5563 4716 4 1491 342 0 0 0 chrX 118860013 118860051 -47790245 + (TAG)n Simple_repeat Simple_repeat 1 38 0 4 1491 2711 259 38 9 chrX 118860051 118860075 -47790221 - Lx5 LINE L1 -1162 4715 4692 4 1491 358 355 38 43 chrX 118860258 118860467 -47789829 - MIRb SINE MIR -22 246 39 4 1491 180 111 0 0 chrX 118860633 118860660 -47789636 + (TTA)n Simple_repeat Simple_repeat 3 29 0 4 1491 229 358 86 31 chrX 118861328 118861550 -47788746 - MIR SINE MIR 0 262 29 4 1491 15951 136 11 2 chrX 118861975 118864538 -47785758 - L1Md_F LINE L1 -122 5761 3180 4 1491 229 26 26 26 chrX 118864538 118864577 -47785719 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1491 15951 136 11 2 chrX 118864577 118864801 -47785495 - L1Md_F LINE L1 -2704 3179 2951 4 1491 2706 179 17 11 chrX 118864788 118865755 -47784541 - L1Md_F LINE L1 -2488 1426 509 4 1491 192 125 0 0 chrX 118866308 118866340 -47783956 + (TAA)n Simple_repeat Simple_repeat 2 33 0 4 1491 187 333 68 39 chrX 118867323 118867426 -47782870 + L3 LINE CR1 3273 3378 -1111 4 1491 221 355 37 25 chrX 118867457 118867538 -47782758 - B1F2 SINE Alu -59 90 9 4 1491 11785 216 38 22 chrX 118867949 118870385 -47779911 - Lx2B LINE L1 0 7058 4422 4 1491 6083 36 0 0 chrX 118870385 118871105 -47779191 - L1Md_T LINE L1 0 6582 5863 4 1491 11785 194 19 32 chrX 118871105 118872605 -47777691 - Lx2B LINE L1 -1456 4421 2992 4 1491 2898 182 8 36 chrX 118872610 118872663 -47777633 - Lx2B LINE L1 -3718 2168 2122 4 1491 3193 81 0 9 chrX 118872663 118873088 -47777208 - BGLII LTR ERVK 0 421 1 4 1491 2898 182 8 36 chrX 118873088 118873211 -47777085 - Lx2B LINE L1 -3765 2121 2005 4 1491 306 0 0 0 chrX 118873211 118873245 -47777051 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1491 2898 182 8 36 chrX 118873245 118873808 -47776488 - Lx2B LINE L1 -3882 2004 1450 4 1491 275 232 0 14 chrX 118873836 118873906 -47776390 - L1_Mur1 LINE L1 -6220 762 694 4 1491 347 182 0 0 chrX 118873955 118874032 -47776264 - Lx2B LINE L1 -5961 1125 1049 4 1491 2773 119 14 62 chrX 118874024 118874768 -47775528 - Lx3_Mus LINE L1 -869 6140 5465 4 1491 5778 122 5 1 chrX 118874768 118875628 -47774668 + Lx3_Mus LINE L1 6147 7009 0 4 1491 1044 108 0 0 chrX 118875634 118875791 -47774505 + (GAAA)n Simple_repeat Simple_repeat 4 160 0 4 1491 546 286 0 0 chrX 118875794 118875962 -47774334 - L1VL4 LINE L1 -5595 707 540 4 1491 245 0 0 79 chrX 118876253 118876291 -47774005 + (TTTTC)n Simple_repeat Simple_repeat 1 35 0 4 1491 396 123 0 24 chrX 118876291 118876374 -47773922 - Lx2A LINE L1 -2 7006 6926 4 1491 4146 128 28 22 chrX 118876376 118877098 -47773198 - Lx2A LINE L1 -40 6968 6243 4 1491 611 268 60 83 chrX 118877431 118877696 -47772600 - RLTR22_Mur LTR ERVK 0 1848 1590 4 1491 2492 208 76 11 chrX 118878051 118878758 -47771538 - RLTR22_Mur LTR ERVK -1099 749 1 4 1491 315 0 0 0 chrX 118878862 118878897 -47771399 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1491 5687 135 20 4 chrX 118879002 118879939 -47770357 - Lx3A LINE L1 0 6981 6030 4 1491 238 26 51 0 chrX 118880068 118880107 -47770189 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 4 1491 1288 259 77 32 chrX 118880528 118880907 -47769389 + MTD LTR MaLR 18 413 -6 4 1491 32 91 0 0 chrX 118881375 118881463 -47768833 + AT_rich Low_complexity Low_complexity 1 88 0 4 1491 1084 166 14 19 chrX 118881613 118881828 -47768468 - Lx2B LINE L1 -7 6993 6780 4 1491 345 281 61 9 chrX 118881929 118882084 -47768212 - Lx9 LINE L1 -1752 5892 5699 4 186 1506 233 31 3 chrX 118882084 118882411 -47767885 - MTC LTR MaLR -53 368 33 4 1492 503 230 214 51 chrX 118882462 118882696 -47767600 + RLTR10A LTR ERVK 140 411 0 4 1492 372 184 55 55 chrX 118882712 118882821 -47767475 + RLTR45-int LTR ERVK 318 426 -1561 4 1492 1387 305 45 47 chrX 118883213 118883769 -47766527 + IAP-d-int LTR ERVK 3505 4212 -3369 4 1492 8225 28 0 0 chrX 118883769 118884730 -47765566 + L1Md_A LINE L1 5621 6581 -1 4 1492 1387 325 54 51 chrX 118884730 118886114 -47764182 + IAP-d-int LTR ERVK 3808 5207 -1335 4 1492 1601 217 21 25 chrX 118886248 118886731 -47763565 + RLTR45-int LTR ERVK 6605 7042 -202 4 1492 490 248 214 51 chrX 118886766 118887000 -47763296 + RLTR10A LTR ERVK 140 411 0 4 1492 65 14 0 0 chrX 118887492 118887564 -47762732 + AT_rich Low_complexity Low_complexity 1 72 0 4 1492 741 345 53 11 chrX 118887583 118887943 -47762353 + Lx8 LINE L1 6226 6600 -873 4 1492 1162 299 77 15 chrX 118887968 118888369 -47761927 + RLTR17 LTR ERVK 198 623 -69 4 1492 2240 234 50 41 chrX 118888400 118889107 -47761189 + RMER3D-int LTR ERVK 1 713 -2129 4 1492 1113 216 94 14 chrX 118889166 118889524 -47760772 + RMER3D-int LTR ERVK 1014 1387 -1455 4 1492 4919 211 65 55 chrX 118889611 118891075 -47759221 + RMER3D-int LTR ERVK 1363 2841 -1 4 1492 2370 205 39 26 chrX 118891077 118891623 -47758673 + RLTR31_Mur LTR ERVK 1 553 0 4 1492 804 337 86 40 chrX 118891624 118892220 -47758076 + Lx8 LINE L1 6595 7217 -256 4 1492 183 42 0 0 chrX 118892408 118892432 -47757864 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 1492 1735 166 6 3 chrX 118892847 118893168 -47757128 - L1_Mur2 LINE L1 -1633 4244 3923 4 1492 3119 180 30 3 chrX 118893171 118893779 -47756517 + L1_Mur2 LINE L1 4247 4870 -1007 4 1492 4343 136 37 3 chrX 118893783 118894486 -47755810 + L1_Mus4 LINE L1 5904 6630 -6 4 1492 476 32 16 0 chrX 118894960 118895022 -47755274 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 1492 246 128 0 0 chrX 118895022 118895060 -47755236 + (TATG)n Simple_repeat Simple_repeat 4 42 0 4 1492 16105 151 12 51 chrX 118895230 118897638 -47752658 + L1_Mus3 LINE L1 2891 5301 -582 4 1492 2669 87 50 3 chrX 118897638 118898020 -47752276 + MTB LTR MaLR 1 400 0 4 1492 6503 118 15 53 chrX 118898020 118899162 -47751134 + MTB-int LTR MaLR 1 1098 0 4 1492 593 143 0 0 chrX 118899162 118899253 -47751043 + MTB_Mm LTR MaLR 1 91 -316 4 1492 421 36 73 0 chrX 118899250 118899305 -47750991 + MTB LTR MaLR 342 400 0 4 1492 16105 123 9 33 chrX 118899305 118900634 -47749662 + L1_Mus3 LINE L1 5354 6630 -8 4 1492 23 33 0 0 chrX 118900640 118900670 -47749626 + AT_rich Low_complexity Low_complexity 1 30 0 4 1492 1513 157 36 0 chrX 118900817 118901098 -47749198 - Lx2A1 LINE L1 -1053 5955 5665 4 1492 5802 167 30 2 chrX 118901098 118902142 -47748154 + Lx2A1 LINE L1 5929 7001 -7 4 1492 9737 224 28 12 chrX 118902176 118904653 -47745643 + L1_Mur2 LINE L1 2951 5464 -413 4 1492 546 277 108 47 chrX 118904644 118904856 -47745440 + Lx5 LINE L1 6812 7053 -5 4 1492 314 161 0 18 chrX 118904873 118904930 -47745366 + ORR1B2 LTR MaLR 312 367 0 4 1492 1213 269 29 0 chrX 118905135 118905447 -47744849 - Lx9 LINE L1 -727 6917 6597 4 1492 1182 299 55 38 chrX 118905459 118906126 -47744170 + Lx9 LINE L1 6945 7623 -21 4 1492 244 272 56 8 chrX 118906200 118906326 -47743970 + L1M3c LINE L1 1051 1182 -4959 4 1492 421 347 46 98 chrX 118906699 118907047 -47743249 + Tigger7 DNA MER2_type 4 333 -2158 4 1492 2478 171 75 0 chrX 118907048 118907527 -47742769 + Lx2A LINE L1 6481 6995 -13 4 1492 378 85 0 0 chrX 118907551 118907610 -47742686 + (A)n Simple_repeat Simple_repeat 1 59 0 4 1492 458 304 13 13 chrX 118907926 118908076 -47742220 - Lx8 LINE L1 -545 6928 6779 4 1492 2031 240 54 14 chrX 118908217 118908921 -47741375 - Lx4B LINE L1 -12 6964 6222 4 1492 307 262 105 20 chrX 118908934 118909086 -47741210 - L1MA8 LINE L1 -418 5873 5709 4 1492 2950 200 26 31 chrX 118909127 118909699 -47740597 - L1_Mur2 LINE L1 -3236 2641 2061 4 1492 425 76 15 0 chrX 118909699 118909765 -47740531 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 1492 2950 200 26 31 chrX 118909765 118909895 -47740401 - L1_Mur2 LINE L1 -3817 2060 1943 4 1492 1343 139 21 0 chrX 118909895 118910133 -47740163 + BGLII LTR ERVK 1 243 -178 4 1492 1254 310 11 4 chrX 118910201 118910667 -47739629 + MYSERV6-int LTR ERVK 452 920 -8039 4 1492 661 294 14 14 chrX 118910673 118910894 -47739402 + MYSERV6-int LTR ERVK 1080 1300 -7659 4 1492 824 202 182 55 chrX 118911065 118911411 -47738885 + RMER3D-int LTR ERVK 459 848 -1994 4 1492 804 176 53 13 chrX 118911470 118911765 -47738531 + RMER3D-int LTR ERVK 354 837 -2005 4 1492 375 23 0 0 chrX 118911765 118911809 -47738487 + (GGGGA)n Simple_repeat Simple_repeat 4 47 0 4 1492 1886 174 112 11 chrX 118911857 118912329 -47737967 + RMER3D-int LTR ERVK 1014 1533 -1309 4 1492 684 163 28 43 chrX 118912369 118912510 -47737786 + RMER3D-int LTR ERVK 1541 1679 -1163 4 1492 2560 233 70 48 chrX 118912529 118913426 -47736870 + RMER3D-int LTR ERVK 1925 2841 -1 4 1492 2679 115 5 12 chrX 118913428 118913849 -47736447 + BGLII LTR ERVK 4 421 0 4 1492 2444 179 76 3 chrX 118913855 118914422 -47735874 - L1_Mur2 LINE L1 -3936 1941 1334 4 1492 1262 201 33 99 chrX 118914422 118914754 -47735542 - ORR1B2 LTR MaLR -57 310 1 4 1492 234 58 57 19 chrX 118915776 118915829 -47734467 + (CAAAAA)n Simple_repeat Simple_repeat 2 56 0 4 1492 2930 79 5 8 chrX 118916042 118916439 -47733857 + MTA_Mm LTR MaLR 1 396 0 4 1492 7231 89 16 69 chrX 118916439 118917599 -47732697 + MTA_Mm-int LTR MaLR 1 1098 0 4 1492 3027 68 5 5 chrX 118917599 118917995 -47732301 + MTA_Mm LTR MaLR 1 396 0 4 1492 54 56 0 0 chrX 118918659 118918748 -47731548 + AT_rich Low_complexity Low_complexity 1 89 0 4 1492 5153 141 53 16 chrX 118918941 118919813 -47730483 - RMER17A2 LTR ERVK 0 906 3 4 1492 450 0 0 0 chrX 118919828 118919878 -47730418 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 1492 244 381 9 9 chrX 118920126 118920232 -47730064 + MT2A LTR ERVL 355 460 -73 4 1492 392 0 21 0 chrX 118920383 118920431 -47729865 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1492 23 0 0 0 chrX 118920926 118920949 -47729347 + AT_rich Low_complexity Low_complexity 1 23 0 4 1492 1589 190 62 57 chrX 118921080 118921448 -47728848 - ORR1C1 LTR MaLR -8 370 1 4 1492 1544 129 47 11 chrX 118921507 118921601 -47728695 + L1_Mur1 LINE L1 4754 4846 -1040 4 1492 315 0 0 0 chrX 118921601 118921636 -47728660 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 4 1492 1544 129 47 11 chrX 118921636 118921815 -47728481 + L1_Mur1 LINE L1 4847 5035 -851 4 1492 13843 146 65 23 chrX 118921811 118924190 -47726106 + L1VL2 LINE L1 433 2720 -1194 4 1492 216 0 0 0 chrX 118924190 118924214 -47726082 + (TC)n Simple_repeat Simple_repeat 2 25 0 4 1492 414 0 0 0 chrX 118924214 118924259 -47726037 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 1492 13843 129 32 32 chrX 118924259 118925279 -47725017 + L1VL2 LINE L1 2721 3653 -2230 4 1492 3730 86 2 0 chrX 118925279 118925780 -47724516 - L1_Mus2 LINE L1 -1 6565 6064 4 1492 12969 188 26 78 chrX 118925780 118926568 -47723728 + L1VL2 LINE L1 3654 4388 -1495 4 1492 6013 165 33 8 chrX 118926569 118927667 -47722629 + Lx3B LINE L1 5849 6973 0 4 1492 456 322 98 33 chrX 118927685 118928125 -47722171 + L1M4c LINE L1 2329 2810 -3569 4 1492 4965 67 0 2 chrX 118929758 118930399 -47719897 - L1_Mus1 LINE L1 -2 6565 5926 4 1492 21 0 0 0 chrX 118930916 118930937 -47719359 + AT_rich Low_complexity Low_complexity 1 21 0 4 1492 283 261 76 43 chrX 118931021 118931113 -47719183 - MT2A LTR ERVL -108 425 331 4 1492 312 304 19 19 chrX 118931131 118931235 -47719061 - MT2A LTR ERVL -344 189 86 4 1492 204 159 0 22 chrX 118931386 118931431 -47718865 + T-rich Low_complexity Low_complexity 2 45 0 4 1492 828 89 0 0 chrX 118932378 118932501 -47717795 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 4 1492 1869 267 75 13 chrX 118932559 118932649 -47717647 - RLTR20B3 LTR ERVK 0 577 483 4 1492 471 18 0 0 chrX 118932649 118932705 -47717591 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1492 1869 267 75 13 chrX 118932705 118933157 -47717139 - RLTR20B3 LTR ERVK -95 482 2 4 1492 2800 52 6 0 chrX 118933540 118933884 -47716412 + ORR1A0 LTR MaLR 1 346 0 4 1492 414 0 0 0 chrX 118934045 118934091 -47716205 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 4 1492 25 51 0 0 chrX 118934780 118934819 -47715477 + AT_rich Low_complexity Low_complexity 1 39 0 4 1492 759 318 73 5 chrX 118934941 118935324 -47714972 + L1M3 LINE L1 3411 3819 -2321 4 1492 402 203 0 0 chrX 118935342 118935460 -47714836 + (CCCCAA)n Simple_repeat Simple_repeat 5 122 0 4 1492 210 319 0 0 chrX 118935543 118935590 -47714706 + PB1D7 SINE Alu 73 119 -1 5 1492 1507 286 67 51 chrX 118935728 118936324 -47713972 + RCHARR1 DNA MER1_type 2 611 -363 5 1492 186 43 0 0 chrX 118936324 118936347 -47713949 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1492 1507 286 67 51 chrX 118936347 118936439 -47713857 + RCHARR1 DNA MER1_type 612 701 -273 5 1492 886 328 56 39 chrX 118936445 118936877 -47713419 - Lx8 LINE L1 -561 6912 6474 5 1492 570 324 0 11 chrX 118936892 118937076 -47713220 - Lx8 LINE L1 -1073 6400 6219 5 1492 419 275 163 20 chrX 118937359 118937551 -47712745 + RCHARR1 DNA MER1_type 680 903 -71 5 1492 372 22 0 0 chrX 118937551 118937596 -47712700 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1492 417 39 0 0 chrX 118937596 118937646 -47712650 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 1492 419 275 163 20 chrX 118937646 118937704 -47712592 + RCHARR1 DNA MER1_type 904 966 -8 5 1492 280 279 54 36 chrX 118937711 118937878 -47712418 + L1M3 LINE L1 3989 4158 -1982 4 1492 5196 161 28 3 chrX 118937903 118939063 -47711233 + Lx4A LINE L1 395 1583 -4294 5 1492 9171 154 48 30 chrX 118939035 118940004 -47710292 + Lx4A LINE L1 3454 4440 -1437 5 1492 3524 110 9 13 chrX 118940004 118940549 -47709747 + L1_Mus2 LINE L1 6021 6563 -3 5 1492 9171 154 48 30 chrX 118940549 118941464 -47708832 + Lx4A LINE L1 4441 5371 -506 5 1492 5506 158 8 30 chrX 118941496 118942538 -47707758 - L1_Mus4 LINE L1 -995 4888 3870 5 1492 5898 158 50 8 chrX 118942531 118944134 -47706162 + L1_Mus4 LINE L1 4989 6636 0 5 1492 7497 180 14 48 chrX 118944136 118945851 -47704445 + Lx4A LINE L1 5362 7057 -1 5 1492 26 50 0 0 chrX 118946120 118946160 -47704136 + AT_rich Low_complexity Low_complexity 1 40 0 5 1492 21 0 0 0 chrX 118946195 118946216 -47704080 + AT_rich Low_complexity Low_complexity 1 21 0 5 1492 315 0 0 0 chrX 118946307 118946342 -47703954 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1492 23 33 0 0 chrX 118946910 118946940 -47703356 + AT_rich Low_complexity Low_complexity 1 30 0 5 1492 508 359 10 10 chrX 118947024 118947232 -47703064 + B3 SINE B2 6 213 -3 5 1492 243 204 69 129 chrX 118947357 118947458 -47702838 + ORR1C2 LTR MaLR 1 95 -283 5 1492 18502 99 11 11 chrX 118947458 118952072 -47698224 - L1Md_F2 LINE L1 -28 6554 383 5 1492 3819 63 52 6 chrX 118952083 118952597 -47697699 - L1Md_F3 LINE L1 -16 6568 6031 5 1492 5426 52 4 0 chrX 118952598 118953403 -47696893 + L1Md_F3 LINE L1 5195 6002 -582 5 1492 612 271 137 45 chrX 118953407 118953672 -47696624 + ORR1C2 LTR MaLR 43 321 -63 5 1492 32093 92 7 5 chrX 118953672 118959077 -47691219 + L1MA9 LINE L1 175 5616 -696 5 1492 7294 81 4 8 chrX 118959077 118960024 -47690272 + L1Md_F2 LINE L1 5588 6537 -45 5 1492 7028 36 0 4 chrX 118960024 118960849 -47689447 - RLTR13B2 LTR ERVK 0 822 1 5 1492 7294 81 4 8 chrX 118960849 118960900 -47689396 + L1Md_F2 LINE L1 6538 6582 0 5 1492 1306 270 16 119 chrX 118960900 118961202 -47689094 + L1MA9 LINE L1 5617 5851 -461 5 1492 1483 73 5 0 chrX 118961257 118961449 -47688847 + B2_Mm1a SINE B2 1 193 0 5 1492 251 236 0 0 chrX 118961451 118961506 -47688790 + ORR1C2 LTR MaLR 324 378 0 5 1492 1324 268 134 2 chrX 118961506 118961947 -47688349 - Lx9 LINE L1 -206 7438 6940 5 1492 8475 11 0 0 chrX 118961949 118962963 -47687333 - L1Md_A LINE L1 -644 5938 4925 5 1492 5659 20 0 0 chrX 118962963 118963614 -47686682 + L1Md_A LINE L1 5931 6581 -1 5 1492 1862 264 62 43 chrX 118963620 118964250 -47686046 - Lx9 LINE L1 -695 6949 6308 5 1492 1160 127 0 0 chrX 118964326 118964492 -47685804 + L1Md_F2 LINE L1 6050 6215 -367 5 1492 4466 108 0 4 chrX 118964482 118965403 -47684893 - L1_Mus1 LINE L1 -364 6203 5288 5 1492 8064 50 1 0 chrX 118965398 118966438 -47683858 - L1Md_F2 LINE L1 0 6582 5542 5 1492 29638 109 8 11 chrX 118966437 118969765 -47680531 + L1_Mus1 LINE L1 1329 4627 -1256 5 1492 245 29 29 0 chrX 118969765 118969799 -47680497 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 1492 29638 111 12 8 chrX 118969799 118971715 -47678581 + L1_Mus1 LINE L1 4628 6567 0 5 1492 216 0 0 0 chrX 118972420 118972444 -47677852 + (CAAAAA)n Simple_repeat Simple_repeat 3 26 0 5 1492 422 324 57 4 chrX 118972575 118972838 -47677458 + L1M5 LINE L1 4448 4724 -1422 5 1492 2577 165 5 7 chrX 118973644 118974084 -47676212 + Lx3A LINE L1 6527 6965 -16 5 1492 423 0 0 0 chrX 118974085 118974132 -47676164 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 5 1492 674 306 60 0 chrX 118974195 118974447 -47675849 + Lx6 LINE L1 7190 7456 -4 5 1492 26 88 0 0 chrX 118975013 118975081 -47675215 + AT_rich Low_complexity Low_complexity 1 68 0 5 1492 182 333 86 0 chrX 118975133 118975238 -47675058 + L2 LINE L2 2252 2365 -1054 5 1492 3790 210 82 11 chrX 118975364 118976307 -47673989 + Lx6 LINE L1 4946 5941 -1519 5 1492 21 0 0 0 chrX 118976969 118976990 -47673306 + AT_rich Low_complexity Low_complexity 1 21 0 5 1492 686 320 25 17 chrX 118977101 118977336 -47672960 + Lx9 LINE L1 6458 6694 -950 5 1492 2226 154 18 5 chrX 118977652 118978043 -47672253 - L1_Mur2 LINE L1 -431 5446 5051 5 1492 797 68 109 17 chrX 118978052 118978171 -47672125 + L1_Mus4 LINE L1 6099 6228 -408 5 1492 1224 199 42 24 chrX 118978165 118978453 -47671843 - L1_Mm LINE L1 -788 5095 4803 5 1492 2669 171 2 4 chrX 118978453 118978923 -47671373 + Lx2A1 LINE L1 6540 7008 0 5 1492 32 57 0 0 chrX 118978969 118979022 -47671274 + AT_rich Low_complexity Low_complexity 1 53 0 5 1492 1380 252 95 36 chrX 118979509 118980076 -47670220 + RMER19B LTR ERVK 37 662 -240 5 1492 25 83 0 0 chrX 118980528 118980588 -47669708 + AT_rich Low_complexity Low_complexity 1 60 0 5 1492 424 288 133 25 chrX 118980985 118981181 -47669115 - Lx6 LINE L1 -117 7343 7127 5 1492 501 62 0 0 chrX 118981182 118981247 -47669049 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1492 676 121 7 7 chrX 118981251 118981393 -47668903 + (TAGA)n Simple_repeat Simple_repeat 4 145 0 5 1492 415 381 118 2 chrX 118981593 118981993 -47668303 - Lx5 LINE L1 -695 6355 5910 5 1492 225 0 0 0 chrX 118982036 118982061 -47668235 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 5 1492 7120 109 37 29 chrX 118982067 118983722 -47666574 + L1_Mus3 LINE L1 4972 6638 0 5 1492 2577 235 80 11 chrX 118983729 118984476 -47665820 - L1_Mur2 LINE L1 -2707 3170 2372 5 1492 327 105 0 0 chrX 118984477 118984534 -47665762 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 1492 272 203 0 0 chrX 118984534 118984598 -47665698 - L1_Mur2 LINE L1 -3892 1985 1922 5 1492 10468 114 11 10 chrX 118984690 118986931 -47663365 - L1_Mus1 LINE L1 0 6567 4323 5 1492 10011 122 4 22 chrX 118986924 118989549 -47660747 - L1_Mus1 LINE L1 -3097 2786 217 5 1492 1346 219 53 19 chrX 118989549 118990120 -47660176 - L1_Mur2 LINE L1 -4261 1616 1021 5 1492 982 133 60 6 chrX 118990124 118990290 -47660006 + LTRIS2 LTR ERV1 390 564 0 5 1492 892 125 105 23 chrX 118990942 118991114 -47659182 + RMER16-int LTR ERVK 141 326 -5080 5 1492 4481 141 22 14 chrX 118991098 118991856 -47658440 + RMER16-int LTR ERVK 681 1444 -3962 5 1492 2713 232 100 6 chrX 118991847 118992558 -47657738 + MuRRS4-int LTR ERV1 760 1537 -3526 5 1492 6234 200 14 18 chrX 118992559 118993873 -47656423 + MuRRS4-int LTR ERV1 3124 5472 -2084 5 1492 829 232 50 0 chrX 118993881 118994101 -47656195 + MuRRS4-int LTR ERV1 4791 5021 -42 5 1492 3418 85 2 24 chrX 118994102 118994597 -47655699 + LTRIS2 LTR ERV1 1 484 -80 5 1492 412 269 27 34 chrX 118994606 118994752 -47655544 - L1_Mur2 LINE L1 -6645 1083 939 5 1492 23 0 0 0 chrX 118995581 118995604 -47654692 + AT_rich Low_complexity Low_complexity 1 23 0 5 1492 8052 103 12 5 chrX 118995620 118997328 -47652968 + MusHAL1 LINE L1 210 1928 -1425 5 1492 9119 144 13 40 chrX 118997324 119000000 -47650296 + L1Md_A LINE L1 202 2806 -1108 5 1492 21081 66 2 4 chrX 119000000 119002784 -47647512 + L1Md_F3 LINE L1 2809 5586 -297 1 1492 7845 51 4 4 chrX 119002784 119003765 -47646531 + L1Md_F3 LINE L1 5587 6567 -17 1 1492 202 330 83 57 chrX 119004140 119004333 -47645963 + MIR SINE MIR 43 240 -22 2 1492 7814 124 23 57 chrX 119004635 119006121 -47644175 + MusHAL1 LINE L1 1273 2708 -4 3 1492 48 32 0 0 chrX 119006404 119006466 -47643830 + AT_rich Low_complexity Low_complexity 1 62 0 4 1492 44 91 0 0 chrX 119009690 119009811 -47640485 + AT_rich Low_complexity Low_complexity 1 121 0 5 1492 528 45 0 0 chrX 119010257 119010324 -47639972 + (TTA)n Simple_repeat Simple_repeat 3 69 0 6 1492 3575 160 22 2 chrX 119010327 119010954 -47639342 - Lx3B LINE L1 -3 6970 6331 7 1492 579 53 0 0 chrX 119010986 119011061 -47639235 + (TTA)n Simple_repeat Simple_repeat 1 75 0 8 1492 257 314 30 30 chrX 119011327 119011563 -47638733 + RMER17D LTR ERVK 238 473 -416 9 1492 227 273 90 13 chrX 119011563 119011641 -47638655 + MLT1B LTR MaLR 232 315 -75 1 1492 207 0 0 0 chrX 119011641 119011664 -47638632 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1492 389 337 45 56 chrX 119012040 119012238 -47638058 - MTE2a LTR MaLR -15 364 169 1 1492 34 55 0 0 chrX 119012273 119012328 -47637968 + AT_rich Low_complexity Low_complexity 1 55 0 1 1492 450 245 167 14 chrX 119012341 119012556 -47637740 - Lx9 LINE L1 -81 7563 7316 1 1492 323 333 65 26 chrX 119012593 119012747 -47637549 - MTE2a LTR MaLR -258 161 2 1 1492 541 264 0 12 chrX 119012768 119012933 -47637363 + Lx2 LINE L1 6833 6995 -2 1 1492 519 17 0 0 chrX 119012996 119013056 -47637240 + (GAAA)n Simple_repeat Simple_repeat 3 62 0 1 186 3139 9 0 0 chrX 119013114 119013460 -47636836 - ORR1A0 LTR MaLR 0 346 1 1 1493 14039 54 2 3 chrX 119013460 119015253 -47635043 - ORR1A0-int LTR MaLR 0 1792 1 1 1493 3102 14 0 0 chrX 119015253 119015599 -47634697 - ORR1A0 LTR MaLR 0 346 1 1 1493 24 32 0 0 chrX 119016622 119016653 -47633643 + AT_rich Low_complexity Low_complexity 1 31 0 1 1493 801 190 11 33 chrX 119017039 119017219 -47633077 + B2_Mm2 SINE B2 3 178 -17 1 1493 29 47 0 0 chrX 119017259 119017302 -47632994 + AT_rich Low_complexity Low_complexity 1 43 0 2 1493 425 288 25 0 chrX 119017434 119017552 -47632744 + Lx9 LINE L1 7057 7177 -467 2 1493 555 270 149 22 chrX 119017612 119017973 -47632323 + Lx9 LINE L1 7111 7517 -127 2 1493 12322 131 21 12 chrX 119018181 119018972 -47631324 + L1_Mus2 LINE L1 3825 4630 -1253 2 1493 252 0 0 0 chrX 119018972 119019000 -47631296 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 2 1493 12322 131 21 12 chrX 119019000 119019590 -47630706 + L1_Mus2 LINE L1 4631 5203 -680 2 1493 2964 57 34 0 chrX 119019590 119019973 -47630323 - MTA_Mm LTR MaLR 0 396 1 2 1493 12322 112 55 3 chrX 119019973 119021250 -47629046 + L1_Mus2 LINE L1 5204 6564 -2 2 1493 32 43 0 0 chrX 119021329 119021375 -47628921 + AT_rich Low_complexity Low_complexity 1 46 0 2 1493 2643 52 0 0 chrX 119021390 119021717 -47628579 - L1Md_A LINE L1 0 6582 6256 2 1493 1583 243 6 3 chrX 119022070 119022396 -47627900 + MTC LTR MaLR 93 419 -2 2 1493 3706 220 139 54 chrX 119022396 119023551 -47626745 + MTC-int LTR MaLR 1 1254 -4 2 1493 390 207 0 12 chrX 119023565 119023648 -47626648 + MTC LTR MaLR 5 86 -335 2 1493 1342 295 36 12 chrX 119023661 119024073 -47626223 + Lx6 LINE L1 7034 7455 -5 2 1493 1416 180 26 0 chrX 119024202 119024474 -47625822 + L1_Mur2 LINE L1 5485 5763 -114 3 1493 4698 104 19 63 chrX 119024477 119025266 -47625030 + RLTR13D6 LTR ERVK 3 756 -146 3 1493 5513 86 2 46 chrX 119025266 119026835 -47623461 + L1Md_A LINE L1 519 1975 -3908 3 1493 236 268 14 27 chrX 119027892 119027965 -47622331 - ID4 SINE ID -10 73 2 3 1493 428 264 9 0 chrX 119028162 119028268 -47622028 + U6 snRNA snRNA 1 107 0 3 1493 180 0 0 0 chrX 119028320 119028340 -47621956 + (GGAA)n Simple_repeat Simple_repeat 3 22 0 3 1493 953 102 11 28 chrX 119028340 119028521 -47621775 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 3 1493 269 288 0 0 chrX 119028646 119028712 -47621584 + RSINE1 SINE B4 11 76 -89 3 1493 279 0 0 0 chrX 119029061 119029092 -47621204 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1493 21 36 0 0 chrX 119029139 119029167 -47621129 + AT_rich Low_complexity Low_complexity 1 28 0 3 1493 460 299 17 0 chrX 119029334 119029451 -47620845 + PB1D7 SINE Alu 1 119 -1 4 1493 351 0 0 0 chrX 119029582 119029621 -47620675 + (A)n Simple_repeat Simple_repeat 1 39 0 4 1493 12071 68 0 7 chrX 119029621 119030884 -47619412 + L1_Mm LINE L1 2257 3514 -2369 4 1493 2782 100 78 14 chrX 119030884 119031330 -47618966 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1493 12071 68 0 7 chrX 119031330 119031701 -47618595 + L1_Mm LINE L1 3515 3879 -2004 4 1493 7809 58 3 1 chrX 119031691 119032684 -47617612 + L1_Mm LINE L1 4564 5558 -325 4 1493 234 247 44 56 chrX 119032684 119032712 -47617584 + RLTR13D3 LTR ERVK 688 712 -143 4 1493 8061 46 1 3 chrX 119032712 119033711 -47616585 + L1Md_F3 LINE L1 5587 6583 -1 4 1493 311 133 32 48 chrX 119033711 119033774 -47616522 + RLTR13D6 LTR ERVK 751 812 -90 4 1493 459 108 12 12 chrX 119034841 119034925 -47615371 - L1Md_A LINE L1 -6034 690 607 4 1493 668 131 0 0 chrX 119034922 119035042 -47615254 + L1_Mur2 LINE L1 3033 3149 -2728 4 1493 6148 151 55 14 chrX 119035052 119036983 -47613313 + L1_Mus3 LINE L1 4600 6636 -2 4 1493 33 0 0 0 chrX 119038839 119038872 -47611424 + AT_rich Low_complexity Low_complexity 1 33 0 5 1493 23 33 0 0 chrX 119039061 119039091 -47611205 + AT_rich Low_complexity Low_complexity 1 30 0 5 1493 25 31 0 0 chrX 119039446 119039478 -47610818 + AT_rich Low_complexity Low_complexity 1 32 0 5 1493 1218 224 0 4 chrX 119040183 119040430 -47609866 - Lx2 LINE L1 -653 6344 6099 5 1493 3363 179 10 2 chrX 119040428 119041056 -47609240 + L1_Mm LINE L1 5154 5786 -97 5 1493 1277 138 0 0 chrX 119041039 119041242 -47609054 + L1_Mus3 LINE L1 5658 5860 -778 5 1493 530 258 19 110 chrX 119041290 119041499 -47608797 - RLTR31A_Mm LTR ERVK -1 560 371 5 1493 1046 215 55 48 chrX 119041642 119041931 -47608365 - RLTR31A_Mm LTR ERVK -289 295 5 5 1493 303 214 122 26 chrX 119041933 119042048 -47608248 - L1M3 LINE L1 -3282 2858 2733 5 1493 477 0 0 0 chrX 119042237 119042290 -47608006 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1493 35968 61 6 8 chrX 119042912 119049099 -47601197 - L1Md_A LINE L1 -1 6581 416 5 1493 23 54 0 0 chrX 119049172 119049209 -47601087 + AT_rich Low_complexity Low_complexity 1 37 0 6 1493 22 0 0 0 chrX 119049228 119049250 -47601046 + AT_rich Low_complexity Low_complexity 1 22 0 6 1493 267 197 104 13 chrX 119049259 119049336 -47600960 - B3 SINE B2 -11 205 122 6 1493 1250 99 28 19 chrX 119049371 119049587 -47600709 - L1_Mur1 LINE L1 -1566 4320 4103 6 1493 2070 110 7 0 chrX 119049584 119049885 -47600411 + L1_Mur1 LINE L1 4809 5111 -775 6 1493 301 328 103 22 chrX 119049889 119050073 -47600223 - L1MCa LINE L1 -5001 1750 1552 6 1493 269 301 66 22 chrX 119050090 119050318 -47599978 - L1MCa LINE L1 -5279 1472 1235 6 1493 299 325 6 29 chrX 119050468 119050639 -47599657 - L1MCa LINE L1 -5100 945 779 6 1493 270 333 18 0 chrX 119051021 119051135 -47599161 - L1MCa LINE L1 -6371 380 265 6 1493 1075 170 0 0 chrX 119051211 119051399 -47598897 - RLTR30 LTR ERV1 0 379 192 6 1493 372 169 0 12 chrX 119052074 119052158 -47598138 - RLTR20D LTR ERVK -485 83 1 6 1493 248 365 73 0 chrX 119052168 119052264 -47598032 + B1F SINE Alu 39 141 -8 6 1493 251 366 82 0 chrX 119052301 119052420 -47597876 + B1F SINE Alu 9 141 -8 6 1493 228 271 0 0 chrX 119052442 119052490 -47597806 + ID4_ SINE ID 6 53 -30 7 1493 40 0 0 0 chrX 119053238 119053278 -47597018 + AT_rich Low_complexity Low_complexity 1 40 0 7 1493 183 386 10 10 chrX 119053842 119053944 -47596352 + MIR SINE MIR 146 247 -15 7 1493 609 171 18 0 chrX 119053972 119054083 -47596213 + Lx LINE L1 6444 6556 -98 7 1493 26 30 0 0 chrX 119054673 119054706 -47595590 + AT_rich Low_complexity Low_complexity 1 33 0 7 1493 21 36 0 0 chrX 119054815 119054843 -47595453 + AT_rich Low_complexity Low_complexity 1 28 0 7 1493 2661 152 2 2 chrX 119054844 119055280 -47595016 - Lx LINE L1 -7 6647 6212 7 1493 625 341 32 25 chrX 119055282 119055562 -47594734 - Lx8 LINE L1 -985 6488 6207 7 1493 468 35 0 0 chrX 119055591 119055649 -47594647 + (TG)n Simple_repeat Simple_repeat 2 59 0 7 1493 22 35 0 0 chrX 119055760 119055789 -47594507 + AT_rich Low_complexity Low_complexity 1 29 0 7 1493 9192 133 17 23 chrX 119055806 119058127 -47592169 - L1_Mus2 LINE L1 -3 6563 4274 8 1493 18679 141 43 6 chrX 119058122 119063184 -47587112 - L1Md_F2 LINE L1 -11 6571 940 8 1493 37911 30 0 0 chrX 119063192 119069844 -47580452 - L1Md_T LINE L1 0 6585 1 8 1493 1435 221 87 14 chrX 119069839 119070252 -47580044 - L1Md_F LINE L1 -5659 860 418 8 1493 21895 146 13 79 chrX 119070249 119074245 -47576051 - L1_Mus3 LINE L1 -27 6611 2638 8 1493 219 36 0 0 chrX 119074245 119074273 -47576023 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 8 1493 941 129 0 0 chrX 119074273 119074412 -47575884 - B1_Mus1 SINE Alu -9 139 1 8 1493 21895 152 8 104 chrX 119074412 119074524 -47575772 - L1_Mus3 LINE L1 -3246 2637 2528 8 1493 2758 98 17 0 chrX 119074524 119074930 -47575366 + BGLII LTR ERVK 1 413 -8 8 1493 21895 152 8 104 chrX 119074930 119075991 -47574305 - L1_Mus3 LINE L1 -3246 2527 1480 8 1493 224 30 30 0 chrX 119075997 119076030 -47574266 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1493 912 127 0 60 chrX 119076037 119076188 -47574108 - B1_Mus2 SINE Alu -1 146 5 8 1493 397 234 0 119 chrX 119076079 119076205 -47574091 - MT2B LTR ERVL -337 264 154 9 1493 640 164 32 13 chrX 119076206 119076360 -47573936 - L1_Mus3 LINE L1 -4415 1468 1312 8 1493 792 83 0 0 chrX 119076547 119076656 -47573640 + (TC)n Simple_repeat Simple_repeat 1 109 0 9 1493 183 42 0 0 chrX 119076656 119076679 -47573617 + (CA)n Simple_repeat Simple_repeat 1 24 0 9 1493 1159 96 12 6 chrX 119076730 119076898 -47573398 + Lx4A LINE L1 6641 6809 -249 9 1493 502 300 8 15 chrX 119077277 119077292 -47573004 - RSINE1 SINE B4 -31 134 121 9 1493 324 0 0 0 chrX 119077292 119077328 -47572968 + (TG)n Simple_repeat Simple_repeat 2 37 0 9 1493 502 300 8 15 chrX 119077328 119077444 -47572852 - RSINE1 SINE B4 -45 120 4 9 1493 38327 34 2 7 chrX 119077638 119083628 -47566668 - L1Md_T LINE L1 0 6582 631 9 1493 2867 162 2 86 chrX 119083628 119084316 -47565980 - L1VL4 LINE L1 -2553 1006 390 9 1493 3597 139 12 11 chrX 119084375 119085141 -47565155 - RLTR13C2 LTR ERVK 0 1033 1 9 1493 285 239 0 0 chrX 119085165 119085236 -47565060 - L1_Mus3 LINE L1 -5795 821 751 8 1493 239 345 0 56 chrX 119085364 119085453 -47564843 - MLT1A LTR MaLR -163 211 128 9 1493 878 301 108 54 chrX 119085944 119086387 -47563909 + MLT1D LTR MaLR 24 490 -15 1 1493 23 0 0 0 chrX 119086756 119086779 -47563517 + AT_rich Low_complexity Low_complexity 1 23 0 1 1493 275 287 43 14 chrX 119086928 119087066 -47563230 + L1M2 LINE L1 5379 5520 -771 1 1493 23 0 0 0 chrX 119088117 119088140 -47562156 + AT_rich Low_complexity Low_complexity 1 23 0 1 1493 915 241 29 51 chrX 119088337 119088612 -47561684 + RMER5 LTR ERV1 1 269 -265 1 1493 230 228 0 0 chrX 119088661 119088718 -47561578 + CT-rich Low_complexity Low_complexity 1 57 0 1 1493 565 327 70 19 chrX 119088733 119088948 -47561348 - B4A SINE B4 -25 267 42 1 1493 191 32 65 0 chrX 119089940 119089971 -47560325 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 1 1493 24 0 0 0 chrX 119090122 119090146 -47560150 + AT_rich Low_complexity Low_complexity 1 24 0 1 1493 4441 139 101 29 chrX 119090669 119091503 -47558793 + RMER17A2 LTR ERVK 2 895 -11 1 1493 873 285 67 51 chrX 119092270 119092643 -47557653 - ORR1C2 LTR MaLR -5 379 1 1 1493 734 219 101 0 chrX 119092781 119093018 -47557278 + Lx9 LINE L1 7383 7643 -1 1 1493 564 293 13 13 chrX 119093304 119093456 -47556840 + RSINE1 SINE B4 14 165 0 1 1493 2077 152 94 10 chrX 119094145 119094551 -47555745 + Lx2 LINE L1 6557 6996 -1 1 1493 2947 57 0 0 chrX 119095752 119096106 -47554190 - IAPEY2_LTR LTR ERVK -3 354 1 1 1493 243 329 24 24 chrX 119096343 119096427 -47553869 + MLT1A1 LTR MaLR 43 126 -282 1 1493 407 297 98 45 chrX 119097404 119097685 -47552611 + L1MA7 LINE L1 5167 5471 -713 1 1493 229 307 46 20 chrX 119097723 119097876 -47552420 - Lx9 LINE L1 -23 7621 7465 1 1493 419 280 159 48 chrX 119098074 119098610 -47551686 + L1MA7 LINE L1 5690 6284 -7 1 1493 21 0 0 0 chrX 119098622 119098643 -47551653 + AT_rich Low_complexity Low_complexity 1 21 0 1 1493 22 0 0 0 chrX 119098757 119098779 -47551517 + AT_rich Low_complexity Low_complexity 1 22 0 1 1493 1030 124 0 0 chrX 119098814 119098959 -47551337 + B1_Mm SINE Alu 2 146 -1 1 1493 402 146 0 0 chrX 119098972 119099068 -47551228 + (T)n Simple_repeat Simple_repeat 1 96 0 1 1493 4901 49 3 0 chrX 119099068 119099684 -47550612 + L1Md_F2 LINE L1 4969 5586 -297 1 1493 7634 55 17 0 chrX 119099684 119100659 -47549637 + L1Md_F2 LINE L1 5587 6578 -4 1 1493 225 302 49 30 chrX 119100992 119101156 -47549140 + L1M4 LINE L1 4918 5084 -1062 1 1493 332 304 10 20 chrX 119101229 119101427 -47548869 + L1M4 LINE L1 5114 5309 -837 1 1493 8693 120 14 24 chrX 119101421 119103751 -47546545 + Lx3A LINE L1 4674 6965 -16 1 1493 495 0 0 0 chrX 119103753 119103808 -47546488 + (TAAA)n Simple_repeat Simple_repeat 1 55 0 1 1493 21 57 0 0 chrX 119104229 119104264 -47546032 + AT_rich Low_complexity Low_complexity 1 35 0 1 1493 26123 116 4 10 chrX 119105045 119106671 -47543625 - L1_Mus2 LINE L1 -2 6564 5003 1 1493 1160 68 0 0 chrX 119106671 119106817 -47543479 - B1_Mus2 SINE Alu 0 147 2 1 1493 26123 154 7 16 chrX 119106817 119108157 -47542139 - L1_Mus2 LINE L1 -881 5002 3652 1 1493 3022 79 0 0 chrX 119108157 119108549 -47541747 - L1_Mus1 LINE L1 0 6567 6176 1 1493 26123 152 26 20 chrX 119108549 119111730 -47538566 - L1_Mus2 LINE L1 -2232 3651 424 1 1493 436 312 48 0 chrX 119111992 119112117 -47538179 - B1F1 SINE Alu -10 139 9 1 1493 610 332 15 66 chrX 119112364 119112638 -47537658 - Lx8 LINE L1 -861 6612 6353 1 1493 486 285 58 36 chrX 119112749 119113140 -47537156 - Lx8 LINE L1 -1303 6170 5756 1 1493 437 367 80 3 chrX 119113142 119113429 -47536867 + Lx7 LINE L1 6597 6905 -791 1 1493 1170 269 103 6 chrX 119113497 119113838 -47536458 + ORR1D1 LTR MaLR 1 374 0 1 1493 347 376 49 12 chrX 119113838 119114083 -47536213 + Lx8 LINE L1 6994 7247 -226 1 1493 24 103 0 0 chrX 119114809 119114896 -47535400 + AT_rich Low_complexity Low_complexity 1 87 0 1 1493 935 170 0 0 chrX 119114971 119115118 -47535178 + B1_Mus1 SINE Alu 2 148 0 1 1493 1150 35 14 0 chrX 119115125 119115267 -47535029 + B1_Mus2 SINE Alu 1 144 -3 1 1493 338 22 43 0 chrX 119115267 119115313 -47534983 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 1 1493 472 68 27 0 chrX 119115318 119115391 -47534905 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 1 1493 32950 77 2 15 chrX 119115590 119120762 -47529534 + L1Md_F2 LINE L1 486 5586 -297 1 1493 7762 51 10 3 chrX 119120762 119121739 -47528557 + L1Md_F2 LINE L1 5587 6570 -12 1 1493 874 299 126 30 chrX 119122540 119123382 -47526914 + Lx8 LINE L1 4528 5450 -430 1 1493 582 321 39 45 chrX 119123384 119123740 -47526556 + Lx9 LINE L1 5642 5995 -1649 1 1493 776 326 9 29 chrX 119124031 119124276 -47526020 + MTD LTR MaLR 1 224 -183 1 1493 1268 348 64 72 chrX 119124367 119125324 -47524972 + Lx8 LINE L1 6388 7336 -137 1 1493 904 301 48 15 chrX 119125356 119125687 -47524609 + Lx8 LINE L1 6190 6531 -942 1 1493 632 292 12 12 chrX 119125704 119125867 -47524429 - Lx8 LINE L1 -777 6696 6534 1 1493 223 275 57 14 chrX 119126288 119126358 -47523938 + MER5A DNA MER1_type 116 188 -1 1 1493 1209 48 0 0 chrX 119126513 119126660 -47523636 - B1_Mus2 SINE Alu 0 147 1 1 1493 362 324 36 45 chrX 119127112 119127335 -47522961 + L1M3c LINE L1 196 416 -5897 1 1493 262 330 34 0 chrX 119127682 119127800 -47522496 + GA-rich Low_complexity Low_complexity 6 127 0 1 1493 409 250 19 9 chrX 119127800 119127905 -47522391 + MTEa LTR MaLR 274 379 0 1 1493 332 295 111 73 chrX 119127947 119128181 -47522115 + L1M3c LINE L1 1654 1896 -4488 1 1493 376 281 65 45 chrX 119128521 119128738 -47521558 + L1M3c LINE L1 2336 2553 -3826 1 1493 7357 103 21 46 chrX 119128839 119129653 -47520643 - Lx3_Mus LINE L1 -271 6738 5921 1 1493 1236 96 0 0 chrX 119129653 119129830 -47520466 + (TTCCC)n Simple_repeat Simple_repeat 3 179 0 1 1493 7357 104 18 33 chrX 119129830 119130343 -47519953 - Lx3_Mus LINE L1 -1089 5920 5443 1 1493 2367 104 9 0 chrX 119130343 119130681 -47519615 + Lx3_Mus LINE L1 6669 7009 0 1 1493 585 319 48 15 chrX 119130692 119130878 -47519418 + B3 SINE B2 7 193 -5 1 1493 480 139 0 0 chrX 119130895 119130974 -47519322 + (TA)n Simple_repeat Simple_repeat 1 79 0 1 1493 560 165 63 0 chrX 119130974 119131101 -47519195 - L1_Mur3 LINE L1 -1849 4031 3897 1 1493 9653 163 90 1 chrX 119131100 119133485 -47516811 - Lx LINE L1 -441 6213 3578 1 1493 228 327 135 36 chrX 119133493 119133604 -47516692 + MER67C LTR ERV1 269 390 -321 1 1493 333 331 40 61 chrX 119133633 119133781 -47516515 - B1_Mur2 SINE Alu -2 147 3 1 1493 240 359 122 0 chrX 119134513 119134669 -47515627 + MER5B DNA MER1_type 1 175 -3 1 1493 311 38 85 24 chrX 119134892 119134974 -47515322 + (TTTTG)n Simple_repeat Simple_repeat 2 88 0 1 1493 918 80 0 8 chrX 119134976 119135102 -47515194 - B1_Mus1 SINE Alu -1 147 23 1 1493 403 216 27 89 chrX 119135002 119135114 -47515182 - MT2B LTR ERVL -325 276 172 1 1493 315 122 0 0 chrX 119135274 119135323 -47514973 + (T)n Simple_repeat Simple_repeat 1 49 0 1 1493 190 308 0 44 chrX 119135370 119135438 -47514858 - MER5A DNA MER1_type -91 98 34 1 1493 269 341 22 36 chrX 119136416 119136553 -47513743 - MIR SINE MIR -18 244 110 1 1493 660 294 34 54 chrX 119136597 119136802 -47513494 + B3 SINE B2 14 214 -2 1 1493 570 148 0 0 chrX 119137041 119137142 -47513154 + (TG)n Simple_repeat Simple_repeat 2 102 0 1 1493 4329 149 2 69 chrX 119137151 119138308 -47511988 + L1_Mus3 LINE L1 4608 5580 -297 1 1493 8218 43 1 0 chrX 119138309 119139300 -47510996 + L1Md_F2 LINE L1 5588 6579 -3 1 1493 7269 109 15 2 chrX 119139313 119140659 -47509637 + L1_Mus3 LINE L1 5275 6638 0 1 1493 481 314 61 84 chrX 119141059 119141355 -47508941 + Lx9 LINE L1 6949 7237 -407 1 1493 267 140 0 0 chrX 119143245 119143295 -47507001 + (CAA)n Simple_repeat Simple_repeat 2 51 0 1 1493 1056 123 160 0 chrX 119143423 119143546 -47506750 + L1Md_F2 LINE L1 6365 6487 -95 1 1493 210 37 0 0 chrX 119143546 119143573 -47506723 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 1 1493 1056 123 160 0 chrX 119143573 119143636 -47506660 + L1Md_F2 LINE L1 6488 6579 -3 1 186 6786 37 0 5 chrX 119143702 119144522 -47505774 + L1Md_F2 LINE L1 5767 6582 0 1 1494 1008 128 0 0 chrX 119144541 119144689 -47505607 + B1_Mus1 SINE Alu 1 148 0 1 1494 25 0 0 0 chrX 119144689 119144714 -47505582 + AT_rich Low_complexity Low_complexity 1 25 0 1 1494 698 108 49 8 chrX 119144789 119144911 -47505385 - Lx2B LINE L1 -7 6993 6867 1 1494 237 322 165 0 chrX 119145260 119145381 -47504915 + MIR SINE MIR 48 188 -74 1 1494 209 87 65 0 chrX 119146213 119146259 -47504037 + (GTTTG)n Simple_repeat Simple_repeat 1 49 0 1 1494 191 175 0 17 chrX 119146444 119146502 -47503794 + (CAGAGA)n Simple_repeat Simple_repeat 2 58 0 1 1494 1066 101 0 0 chrX 119146785 119146933 -47503363 + B1_Mus1 SINE Alu 1 148 0 1 1494 774 408 45 22 chrX 119147082 119147571 -47502725 - LTR16E2 LTR ERVL -66 502 3 1 1494 797 339 20 13 chrX 119148867 119149166 -47501130 + Lx8 LINE L1 6308 6608 -865 1 1494 25 0 0 0 chrX 119149171 119149196 -47501100 + AT_rich Low_complexity Low_complexity 1 25 0 1 1494 308 273 137 26 chrX 119149356 119149568 -47500728 - RLTR22_Mur LTR ERVK -356 1492 1395 1 1494 189 0 0 0 chrX 119149568 119149589 -47500707 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 1494 189 0 0 0 chrX 119149602 119149623 -47500673 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1494 852 83 0 16 chrX 119149623 119149745 -47500551 - B1_Mus1 SINE Alu 0 148 29 1 1494 487 258 211 31 chrX 119149792 119150020 -47500276 - RLTR22_Mur LTR ERVK -550 1298 1030 1 1494 1251 292 80 114 chrX 119150037 119150891 -47499405 - RLTR22_Mur LTR ERVK -1023 825 1 1 1494 285 326 12 0 chrX 119150892 119150978 -47499318 + Lx8 LINE L1 6655 6741 -732 1 1494 1704 117 22 0 chrX 119151066 119151340 -47498956 - L1_Mur1 LINE L1 -1676 4210 3931 1 1494 1626 167 19 13 chrX 119151310 119151619 -47498677 + L1_Mur1 LINE L1 5403 5713 -173 1 1494 2142 190 21 7 chrX 119151619 119152049 -47498247 + Lx3B LINE L1 6533 6968 -5 1 1494 23 54 0 0 chrX 119152052 119152089 -47498207 + AT_rich Low_complexity Low_complexity 1 37 0 1 1494 489 355 69 53 chrX 119152566 119152884 -47497412 + LTR16D1 LTR ERVL 353 675 0 1 1494 7171 36 0 0 chrX 119153304 119154156 -47496140 + L1Md_T LINE L1 5731 6582 0 1 1494 1702 176 9 18 chrX 119155230 119155560 -47494736 + ORR1A2 LTR MaLR 1 327 0 1 1494 1438 156 152 3 chrX 119155608 119155891 -47494405 - ORR1A2 LTR MaLR -2 325 1 1 1494 280 309 79 45 chrX 119157132 119157423 -47492873 - L1MA5 LINE L1 -107 6193 5893 1 1494 290 366 0 24 chrX 119157846 119157972 -47492324 - MIRb SINE MIR -69 199 77 1 1494 21 57 0 0 chrX 119158182 119158217 -47492079 + AT_rich Low_complexity Low_complexity 1 35 0 2 1494 4315 178 27 20 chrX 119158895 119159793 -47490503 - Lx2B LINE L1 -572 5305 4402 2 1494 8144 179 7 7 chrX 119159793 119161474 -47488822 + Lx2B LINE L1 5325 7000 0 2 1494 3036 155 34 6 chrX 119161937 119162469 -47487827 + Lx3C LINE L1 6420 6966 -10 2 1494 231 321 25 13 chrX 119162736 119162815 -47487481 - MTEa LTR MaLR -282 97 18 2 1494 3659 161 12 36 chrX 119163546 119164204 -47486092 - RLTR26 LTR ERVK 0 642 1 2 1494 1698 136 49 0 chrX 119164207 119164471 -47485825 - MERVK26-int LTR ERVK -2 6917 6641 2 1494 856 134 0 0 chrX 119164473 119164607 -47485689 - MERVK26-int LTR ERVK -901 6018 5885 2 1494 9253 71 2 10 chrX 119164604 119165793 -47484503 - MERVK26-int LTR ERVK -1273 5646 4468 2 1494 339 25 0 0 chrX 119166324 119166364 -47483932 + (GA)n Simple_repeat Simple_repeat 1 40 0 2 1494 21 0 0 0 chrX 119166567 119166588 -47483708 + AT_rich Low_complexity Low_complexity 1 21 0 2 1494 21941 160 33 18 chrX 119167303 119173564 -47476732 - L1Md_F2 LINE L1 0 6582 217 2 1494 735 44 0 0 chrX 119173590 119173681 -47476615 + (TA)n Simple_repeat Simple_repeat 1 91 0 2 1494 40395 16 2 6 chrX 119174808 119181615 -47468681 - L1Md_A LINE L1 0 6582 1 2 1494 2056 271 9 9 chrX 119181882 119181975 -47468321 - Lx6 LINE L1 -1 7459 7367 2 1494 306 0 0 0 chrX 119181975 119182009 -47468287 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1494 2056 271 9 9 chrX 119182009 119182440 -47467856 - Lx6 LINE L1 -94 7366 6936 2 1494 6392 129 3 32 chrX 119183298 119184353 -47465943 - L1_Mus3 LINE L1 -3 6635 5612 2 1494 4520 173 19 5 chrX 119184354 119185200 -47465096 + Lx2 LINE L1 6139 6996 -1 2 1494 1149 64 23 11 chrX 119185232 119185407 -47464889 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 2 1494 547 179 49 63 chrX 119185408 119185551 -47464745 + L1_Mur2 LINE L1 3710 3850 -2036 2 1494 1848 76 19 15 chrX 119185548 119185816 -47464480 - L1_Mus1 LINE L1 -531 6036 5768 2 1494 3615 73 4 0 chrX 119185816 119186292 -47464004 + L1_Mus1 LINE L1 6088 6565 -2 2 1494 3658 171 39 6 chrX 119186299 119187024 -47463272 + L1_Mur2 LINE L1 3836 4584 -1293 2 1494 6493 172 23 2 chrX 119187079 119188912 -47461384 - Lx LINE L1 -2 6652 4790 2 1494 671 0 0 12 chrX 119188912 119188992 -47461304 + (CTATT)n Simple_repeat Simple_repeat 4 82 0 2 1494 5425 204 30 4 chrX 119188992 119189071 -47461225 - Lx LINE L1 -1094 4789 4697 2 1494 2485 124 66 86 chrX 119189071 119189553 -47460743 + RMER17A2 LTR ERVK 1 445 -461 2 1494 756 33 0 0 chrX 119189553 119189644 -47460652 + (TC)n Simple_repeat Simple_repeat 2 92 0 2 1494 2485 191 45 77 chrX 119189644 119189861 -47460435 + RMER17A2 LTR ERVK 446 674 -135 2 1494 1694 98 0 20 chrX 119189861 119190111 -47460185 - L1Md_F2 LINE L1 -138 6444 6200 2 1494 31538 105 10 6 chrX 119190081 119195619 -47454677 - L1Md_F LINE L1 -145 5738 180 2 1494 1147 300 27 69 chrX 119195649 119196211 -47454085 + Lx9 LINE L1 6811 7348 -296 2 1494 261 0 0 0 chrX 119196215 119196244 -47454052 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1494 1068 31 0 0 chrX 119196244 119196371 -47453925 + (GA)n Simple_repeat Simple_repeat 2 129 0 2 1494 594 0 0 0 chrX 119196418 119196484 -47453812 + (TA)n Simple_repeat Simple_repeat 2 67 0 2 1494 360 0 0 0 chrX 119197096 119197136 -47453160 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1494 375 125 0 0 chrX 119197136 119197208 -47453088 + (GA)n Simple_repeat Simple_repeat 2 73 0 2 1494 725 280 46 122 chrX 119198791 119198911 -47451385 + L1MA6 LINE L1 5500 5593 -707 2 1494 940 82 0 98 chrX 119198911 119199074 -47451222 + B1_Mus1 SINE Alu 2 148 0 2 1494 725 280 46 122 chrX 119199074 119199477 -47450819 + L1MA6 LINE L1 5594 5983 -317 2 1494 2031 172 5 13 chrX 119199483 119199878 -47450418 + Lx2 LINE L1 6606 6997 0 2 1494 4559 35 7 0 chrX 119200273 119200823 -47449473 - L1Md_T LINE L1 0 6582 6029 2 1494 3306 51 0 0 chrX 119200823 119201232 -47449064 - L1Md_A LINE L1 -911 4972 4564 2 1494 21704 39 1 11 chrX 119201222 119204700 -47445596 - L1Md_A LINE L1 -2004 3879 440 2 1494 25 0 0 0 chrX 119204968 119204993 -47445303 + AT_rich Low_complexity Low_complexity 1 25 0 2 1494 961 97 0 0 chrX 119204993 119205127 -47445169 - B1_Mus1 SINE Alu -1 147 14 2 1494 402 21 0 0 chrX 119205566 119205613 -47444683 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 1494 339 327 36 18 chrX 119205903 119206071 -47444225 - Lx6 LINE L1 -111 7349 7179 2 1494 3723 116 12 4 chrX 119206115 119206678 -47443618 - L1_Mus3 LINE L1 -6 6632 6065 2 1494 3300 82 21 2 chrX 119206678 119207149 -47443147 + L1_Mus3 LINE L1 5588 6043 -595 2 1494 919 313 45 23 chrX 119207148 119207654 -47442642 - Lx5 LINE L1 -561 6899 6387 2 1494 5433 133 8 12 chrX 119207661 119208552 -47441744 - Lx LINE L1 -1 6653 5767 2 1494 3003 152 16 0 chrX 119208552 119209053 -47441243 + Lx LINE L1 5274 5782 -101 2 1494 2173 227 92 16 chrX 119209051 119210007 -47440289 - Lx5 LINE L1 -671 6379 5320 2 1494 1166 219 126 11 chrX 119210031 119210317 -47439979 - ORR1A2 LTR MaLR -8 319 1 2 1494 1665 241 27 15 chrX 119210318 119210726 -47439570 + RLTR11A2 LTR ERVK 21 433 -94 2 1494 540 0 0 0 chrX 119210726 119210786 -47439510 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 1494 591 175 131 0 chrX 119210786 119210924 -47439372 + Lx2B LINE L1 6838 6999 -9 2 1494 1053 117 0 14 chrX 119210924 119211072 -47439224 + B1_Mus1 SINE Alu 2 147 -1 2 1494 268 246 0 0 chrX 119211114 119211171 -47439125 - Lx6 LINE L1 -311 7149 7093 2 1494 27 49 0 0 chrX 119211171 119211212 -47439084 + AT_rich Low_complexity Low_complexity 1 41 0 2 1494 366 221 10 21 chrX 119211227 119211324 -47438972 + L1_Mur1 LINE L1 221 316 -6668 2 1494 3073 136 95 1 chrX 119211322 119212045 -47438251 + L1_Mur1 LINE L1 219 1423 -4463 2 1494 244 183 133 0 chrX 119212045 119212105 -47438191 + RLTR11A2 LTR ERVK 435 502 -25 2 1494 3628 239 26 6 chrX 119212114 119213049 -47437247 - L1_Mur2 LINE L1 -667 5210 4258 2 1494 280 266 29 15 chrX 119213490 119213623 -47436673 - L1MA8 LINE L1 -305 5995 5864 2 1494 387 0 0 0 chrX 119213728 119213771 -47436525 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 1494 405 0 0 0 chrX 119213771 119213815 -47436481 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1494 387 177 24 37 chrX 119214449 119214531 -47435765 + RLTRETN_Mm LTR ERVK 91 171 -151 2 1494 4241 72 2 16 chrX 119216104 119216684 -47433612 + L1Md_F2 LINE L1 6000 6571 -11 2 1494 1966 126 25 3 chrX 119217195 119217521 -47432775 + BGLII LTR ERVK 1 333 -88 2 1494 8926 88 9 4 chrX 119217523 119218082 -47432214 + Lx3_Mus LINE L1 5346 5903 -1106 2 1494 351 44 0 0 chrX 119218082 119218127 -47432169 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1494 8926 111 42 21 chrX 119218127 119219203 -47431093 + Lx3_Mus LINE L1 5904 7008 -1 2 1494 27 0 0 0 chrX 119219203 119219230 -47431066 + AT_rich Low_complexity Low_complexity 1 27 0 2 1494 492 372 30 95 chrX 119219493 119219829 -47430467 - MER102b DNA MER1_type -16 315 2 2 1494 236 286 14 0 chrX 119220294 119220364 -47429932 - L1M3a LINE L1 -5824 131 61 2 1494 22 0 0 0 chrX 119220675 119220697 -47429599 + AT_rich Low_complexity Low_complexity 1 22 0 2 1494 206 266 211 9 chrX 119221274 119221388 -47428908 + L2a LINE L2 3289 3425 -1 2 1494 32655 91 4 4 chrX 119222346 119225435 -47424861 - L1Md_F2 LINE L1 0 6582 3484 2 1494 438 20 0 0 chrX 119225435 119225486 -47424810 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2 1494 32655 133 19 12 chrX 119225486 119228739 -47421557 - L1Md_F2 LINE L1 -2400 3483 215 2 1494 5091 70 1 0 chrX 119228878 119229540 -47420756 - L1Md_F2 LINE L1 0 6582 5920 2 1494 24 32 0 0 chrX 119230038 119230069 -47420227 + AT_rich Low_complexity Low_complexity 1 31 0 2 1494 352 380 52 28 chrX 119230069 119230359 -47419937 + L1ME1 LINE L1 5874 6170 -9 2 1494 732 214 128 0 chrX 119230591 119230787 -47419509 + URR1A DNA MER1_type 5 225 -1 2 1494 6040 174 42 26 chrX 119231405 119232603 -47417693 - Lx2B LINE L1 -4 6996 5780 2 1494 34470 71 7 12 chrX 119232606 119238308 -47411988 - L1Md_F2 LINE L1 -13 6569 911 2 1494 904 162 0 0 chrX 119238304 119238452 -47411844 - L1Md_F2 LINE L1 -6185 431 284 2 1494 1618 232 3 0 chrX 119238458 119238790 -47411506 - L1_Mm LINE L1 -96 5787 5455 2 1494 3227 94 17 2 chrX 119238820 119239288 -47411008 - L1_Mus3 LINE L1 -4 6634 6160 2 1494 1183 196 4 0 chrX 119239292 119239517 -47410779 + L1_Mur2 LINE L1 5013 5238 -639 2 1494 329 344 43 19 chrX 119239603 119239861 -47410435 + L1MD1 LINE L1 5795 6058 -184 2 1494 585 0 0 0 chrX 119240551 119240616 -47409680 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 1494 34 42 0 0 chrX 119241045 119241093 -47409203 + AT_rich Low_complexity Low_complexity 1 48 0 2 1494 6949 179 52 5 chrX 119241093 119242709 -47407587 - Lx4A LINE L1 -3 7055 5340 2 1494 8246 149 25 4 chrX 119242732 119244145 -47406151 - Lx3B LINE L1 -2 6971 5524 2 1494 4543 175 14 38 chrX 119244139 119244621 -47405675 - Lx3B LINE L1 -676 5201 4729 2 1494 180 0 0 0 chrX 119244621 119244641 -47405655 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1494 4543 175 14 38 chrX 119244641 119245126 -47405170 - Lx3B LINE L1 -1149 4728 4257 2 1494 682 197 7 0 chrX 119245126 119245273 -47405023 - Lx3B LINE L1 -1788 4089 3942 2 1494 6266 147 25 16 chrX 119245267 119245644 -47404652 - Lx3B LINE L1 -3440 2437 2050 2 1494 399 21 0 0 chrX 119245644 119245692 -47404604 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1494 6266 167 16 57 chrX 119245692 119247197 -47403099 - Lx3B LINE L1 -3828 2049 628 2 1494 399 21 0 0 chrX 119247294 119247342 -47402954 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1494 194 344 50 30 chrX 119248395 119248494 -47401802 - MIRb SINE MIR -120 148 48 2 1494 24 67 0 0 chrX 119250019 119250064 -47400232 + AT_rich Low_complexity Low_complexity 1 45 0 2 1494 24 53 0 0 chrX 119250075 119250113 -47400183 + AT_rich Low_complexity Low_complexity 1 38 0 2 1494 2046 201 50 8 chrX 119250233 119250629 -47399667 - MTC LTR MaLR -8 413 1 2 1494 22 0 0 0 chrX 119251331 119251353 -47398943 + AT_rich Low_complexity Low_complexity 1 22 0 2 1494 480 35 0 0 chrX 119251464 119251522 -47398774 + (TA)n Simple_repeat Simple_repeat 1 58 0 2 1494 207 69 0 0 chrX 119251522 119251550 -47398746 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1494 2676 182 33 14 chrX 119252087 119252598 -47397698 + RLTR11A2 LTR ERVK 1 521 -6 2 1494 847 305 88 52 chrX 119253412 119253755 -47396541 + Tigger10 DNA Tigger 362 716 -1127 2 1494 228 35 0 0 chrX 119253810 119253839 -47396457 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1494 339 337 42 16 chrX 119253903 119254093 -47396203 + L1MC4a LINE L1 6397 6591 -1291 2 1494 458 351 6 12 chrX 119254516 119254686 -47395610 - MER5B DNA MER1_type -3 175 7 2 1494 277 317 104 14 chrX 119254698 119254842 -47395454 + MER5A DNA MER1_type 1 157 -32 2 1494 203 0 37 0 chrX 119255137 119255164 -47395132 + (TTA)n Simple_repeat Simple_repeat 1 28 0 2 1494 4797 182 39 24 chrX 119255164 119256162 -47394134 - Lx2B LINE L1 -17 6983 5971 2 1494 2940 62 0 3 chrX 119256162 119256549 -47393747 - L1Md_F2 LINE L1 -1568 4315 3930 2 1494 10243 63 5 1 chrX 119256546 119257877 -47392419 + L1Md_F2 LINE L1 4252 5586 -297 2 1494 7776 61 6 0 chrX 119257877 119258867 -47391429 + L1Md_F2 LINE L1 5587 6582 0 2 1494 279 0 0 0 chrX 119258901 119258932 -47391364 + (TTTAA)n Simple_repeat Simple_repeat 5 35 0 2 1494 3192 98 4 2 chrX 119258941 119259399 -47390897 - L1_Mus3 LINE L1 -7 6631 6173 2 1494 7091 170 21 3 chrX 119259399 119260935 -47389361 - Lx2B LINE L1 -1038 5970 4397 2 1494 1933 150 3 0 chrX 119260940 119261267 -47389029 + Lx2B LINE L1 4053 4380 -1497 2 1494 213 39 0 0 chrX 119261718 119261744 -47388552 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 3 1494 405 0 0 0 chrX 119262516 119262561 -47387735 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 1494 26 50 0 0 chrX 119262814 119262854 -47387442 + AT_rich Low_complexity Low_complexity 1 40 0 3 1494 245 183 17 0 chrX 119263539 119263599 -47386697 + (TATG)n Simple_repeat Simple_repeat 4 64 0 3 1494 2071 231 59 36 chrX 119263645 119264234 -47386062 - RLTR40 LTR ERVK -148 669 67 3 1494 245 300 233 0 chrX 119264267 119264357 -47385939 - RSINE1 SINE B4 -51 114 4 3 1494 243 334 58 97 chrX 119265016 119265381 -47384915 + MLT1C LTR MaLR 72 443 -62 3 1494 494 209 249 17 chrX 119265383 119265552 -47384744 - B3 SINE B2 -4 212 5 3 1494 21 0 0 0 chrX 119266533 119266554 -47383742 + AT_rich Low_complexity Low_complexity 1 21 0 3 1494 206 178 22 0 chrX 119266700 119266745 -47383551 + (TTTA)n Simple_repeat Simple_repeat 4 49 0 3 1494 291 333 0 0 chrX 119267312 119267402 -47382894 - LTR89 LTR ERVL? -743 136 47 3 1494 22 35 0 0 chrX 119267700 119267729 -47382567 + AT_rich Low_complexity Low_complexity 1 29 0 3 1494 34 42 0 0 chrX 119268346 119268394 -47381902 + AT_rich Low_complexity Low_complexity 1 48 0 3 1494 13614 164 24 36 chrX 119268483 119271490 -47378806 - Lx3C LINE L1 0 6976 3925 3 1494 410 240 106 0 chrX 119271490 119271594 -47378702 - B1_Mus1 SINE Alu 0 148 34 3 1494 13614 164 24 36 chrX 119271594 119272383 -47377913 - Lx3C LINE L1 0 3924 3122 3 1494 23 0 0 0 chrX 119272768 119272791 -47377505 + AT_rich Low_complexity Low_complexity 1 23 0 3 1494 472 255 65 7 chrX 119272879 119273017 -47377279 + Lx4B LINE L1 6876 7021 -37 3 1494 432 0 0 0 chrX 119273054 119273102 -47377194 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1494 21 36 0 0 chrX 119273177 119273205 -47377091 + AT_rich Low_complexity Low_complexity 1 28 0 3 1494 249 246 14 14 chrX 119273271 119273341 -47376955 + RMER19A LTR ERVK 664 733 -4 3 1494 28 71 0 0 chrX 119273790 119273846 -47376450 + AT_rich Low_complexity Low_complexity 1 56 0 3 1494 32 0 0 0 chrX 119273885 119273917 -47376379 + AT_rich Low_complexity Low_complexity 1 32 0 3 1494 298 155 50 20 chrX 119273921 119274020 -47376276 + (TATAA)n Simple_repeat Simple_repeat 3 104 0 3 1494 325 154 105 42 chrX 119274086 119274181 -47376115 + Lx LINE L1 6548 6648 -6 3 1494 2839 171 54 21 chrX 119274189 119274816 -47375480 - L1_Mur2 LINE L1 -547 5330 4683 3 1495 26 50 0 0 chrX 119275691 119275731 -47374565 + AT_rich Low_complexity Low_complexity 1 40 0 3 1495 216 0 0 0 chrX 119275944 119275968 -47374328 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 3 1495 221 224 60 20 chrX 119276707 119276757 -47373539 - L2b LINE L2 -16 3359 3308 3 1495 726 96 0 0 chrX 119276892 119276996 -47373300 + (GAAA)n Simple_repeat Simple_repeat 2 105 0 3 1495 498 96 0 0 chrX 119277002 119277075 -47373221 + (GAGAA)n Simple_repeat Simple_repeat 5 77 0 3 1495 242 194 16 0 chrX 119277083 119277145 -47373151 + GA-rich Low_complexity Low_complexity 2 64 0 3 1495 21 0 0 0 chrX 119278887 119278908 -47371388 + AT_rich Low_complexity Low_complexity 1 21 0 3 1495 3400 132 9 11 chrX 119279053 119279583 -47370713 + Lx LINE L1 5793 6321 -333 3 1495 243 0 0 0 chrX 119279755 119279782 -47370514 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1495 1067 195 21 25 chrX 119280631 119280868 -47369428 - Lx LINE L1 0 7008 6773 3 1495 9938 49 2 3 chrX 119280886 119282419 -47367877 + L1Md_F2 LINE L1 4618 6150 -432 3 1495 837 71 0 0 chrX 119282472 119282598 -47367698 + (GA)n Simple_repeat Simple_repeat 1 126 0 3 1495 282 208 39 19 chrX 119283326 119283429 -47366867 + (TA)n Simple_repeat Simple_repeat 2 106 0 3 1495 6927 130 28 4 chrX 119283919 119285283 -47365013 - Lx LINE L1 -3 6651 5253 3 1495 486 161 0 0 chrX 119285281 119285368 -47364928 + L1_Mm LINE L1 4553 4639 -1244 3 1495 429 132 0 0 chrX 119285368 119285385 -47364911 + (A)n Simple_repeat Simple_repeat 1 17 0 3 1495 1110 96 0 0 chrX 119285385 119285531 -47364765 + B1_Mus1 SINE Alu 3 148 0 3 1495 429 132 0 0 chrX 119285531 119285604 -47364692 + (A)n Simple_repeat Simple_repeat 1 73 0 3 1495 3057 179 8 21 chrX 119285611 119285635 -47364661 + L1_Mur2 LINE L1 4622 4637 -1240 3 1495 212 0 36 0 chrX 119285635 119285663 -47364633 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3 1495 3057 179 8 21 chrX 119285663 119286256 -47364040 + L1_Mur2 LINE L1 4638 5231 -646 3 1495 305 229 33 25 chrX 119286597 119286718 -47363578 + Lx9 LINE L1 7512 7633 -11 3 1495 687 228 36 16 chrX 119287411 119287603 -47362693 + Lx7 LINE L1 7373 7568 -128 3 1495 1533 121 0 0 chrX 119287605 119287837 -47362459 + L1_Mm LINE L1 5066 5297 -586 3 1495 2136 67 7 13 chrX 119287837 119288139 -47362157 - MTA_Mm LTR MaLR 0 396 97 3 1495 536 267 6 18 chrX 119288558 119288722 -47361574 + RSINE1 SINE B4 4 165 0 3 1495 26 0 0 0 chrX 119288815 119288841 -47361455 + AT_rich Low_complexity Low_complexity 1 26 0 3 1495 204 97 0 0 chrX 119288843 119288874 -47361422 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1495 842 47 0 0 chrX 119288874 119288980 -47361316 - MTA_Mm LTR MaLR -290 106 1 3 1495 4158 80 6 0 chrX 119288980 119289704 -47360592 + L1_Mus1 LINE L1 5293 6022 -545 3 1495 249 260 29 29 chrX 119289714 119289817 -47360479 + Lx6 LINE L1 7358 7460 0 3 1495 1452 128 0 4 chrX 119290648 119290884 -47359412 - Lx LINE L1 -5 6649 6415 3 1495 3036 166 30 11 chrX 119290899 119291442 -47358854 - RLTR1D LTR ERV1 -16 589 37 3 1495 1328 82 0 5 chrX 119291464 119291648 -47358648 - Lx LINE L1 -249 6405 6223 3 1495 1064 68 7 0 chrX 119292029 119292175 -47358121 + (TTTCC)n Simple_repeat Simple_repeat 4 150 0 3 1495 22 80 0 0 chrX 119292574 119292624 -47357672 + AT_rich Low_complexity Low_complexity 1 50 0 3 1495 468 249 127 23 chrX 119292793 119292966 -47357330 + B3 SINE B2 20 210 -6 3 1495 35097 52 0 3 chrX 119292973 119298362 -47351934 + L1Md_T LINE L1 123 5589 -297 3 1495 8363 37 0 0 chrX 119298362 119299358 -47350938 + L1Md_T LINE L1 5590 6585 0 3 1495 747 300 62 67 chrX 119299400 119299772 -47350524 - MLT1B LTR MaLR -3 387 18 3 1495 26 50 0 0 chrX 119300011 119300051 -47350245 + AT_rich Low_complexity Low_complexity 1 40 0 3 1495 273 298 66 8 chrX 119300849 119300971 -47349325 - L1MB2 LINE L1 -14 6157 6029 3 1495 2181 70 20 1 chrX 119301009 119301335 -47348961 + L1_Mus2 LINE L1 5831 6185 -399 3 1495 412 76 0 0 chrX 119301948 119302014 -47348282 + L1_Mus2 LINE L1 6515 6580 -2 3 1495 22 56 0 0 chrX 119302083 119302119 -47348177 + AT_rich Low_complexity Low_complexity 1 36 0 3 1495 618 310 21 36 chrX 119302208 119302402 -47347894 + B3A SINE B2 6 196 -2 3 1495 27 0 0 0 chrX 119303290 119303317 -47346979 + AT_rich Low_complexity Low_complexity 1 27 0 3 1495 300 294 58 12 chrX 119303341 119303427 -47346869 - B3 SINE B2 -125 91 2 3 1495 1474 291 51 28 chrX 119303921 119304427 -47345869 - Lx6 LINE L1 0 7696 6965 3 1495 5514 79 11 1 chrX 119304427 119305161 -47345135 - L1_Mus1 LINE L1 0 6567 5827 3 1495 1202 297 75 88 chrX 119305161 119305587 -47344709 - Lx6 LINE L1 -493 7203 6783 3 1495 219 354 20 40 chrX 119305761 119305861 -47344435 + L2a LINE L2 3329 3426 0 3 1495 12086 90 8 68 chrX 119306168 119308089 -47342207 - RLTR22_Mus LTR ERVK 0 1808 3 3 1495 22 35 0 0 chrX 119308162 119308191 -47342105 + AT_rich Low_complexity Low_complexity 1 29 0 3 1495 477 0 0 0 chrX 119308467 119308520 -47341776 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1495 1202 94 5 25 chrX 119308542 119308738 -47341558 + L1_Mus4 LINE L1 6437 6628 -8 3 1495 208 390 107 23 chrX 119310076 119310375 -47339921 - L2c LINE L2 -44 3343 3020 3 1495 183 42 0 0 chrX 119312282 119312306 -47337990 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 1495 1019 70 0 0 chrX 119312307 119312436 -47337860 + B1_Mus2 SINE Alu 9 137 -10 3 1495 512 42 0 14 chrX 119312436 119312508 -47337788 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 3 1495 333 0 0 0 chrX 119312569 119312606 -47337690 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1495 318 143 0 0 chrX 119312606 119312656 -47337640 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 1495 180 0 0 0 chrX 119312656 119312676 -47337620 + (CA)n Simple_repeat Simple_repeat 2 21 0 3 1495 220 389 18 54 chrX 119314691 119314857 -47335439 + L2c LINE L2 2975 3134 -253 3 1495 1002 162 0 0 chrX 119314897 119315076 -47335220 + GA-rich Low_complexity Low_complexity 2 180 0 3 1495 33860 81 4 5 chrX 119315426 119322068 -47328228 - L1Md_F2 LINE L1 -2 6580 98 3 1495 235 238 96 73 chrX 119322142 119322278 -47328018 - Lx5 LINE L1 -2 7048 6910 3 1495 4771 131 12 12 chrX 119322340 119323144 -47327152 + L1_Mur1 LINE L1 4568 5371 -515 3 1495 3335 177 2 18 chrX 119323140 119323767 -47326529 - L1_Mur2 LINE L1 -879 4998 4382 3 1495 3580 136 28 10 chrX 119323767 119324346 -47325950 + Lx LINE L1 6059 6647 -7 3 1495 585 42 0 0 chrX 119324697 119324769 -47325527 + (TA)n Simple_repeat Simple_repeat 2 73 0 3 1495 417 20 0 0 chrX 119325347 119325397 -47324899 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1495 8331 141 13 16 chrX 119325900 119327289 -47323007 - Lx2A1 LINE L1 -5 7003 5619 3 1495 11669 145 14 7 chrX 119327286 119330109 -47320187 + L1_Mus3 LINE L1 3798 6637 -1 3 1495 1755 112 4 0 chrX 119330674 119330925 -47319371 - ORR1A4-int LTR MaLR -788 1175 924 3 1495 1887 197 38 5 chrX 119330935 119331039 -47319257 - ORR1A4-int LTR MaLR -1583 380 276 3 1495 189 0 0 0 chrX 119331039 119331060 -47319236 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 3 1495 1887 197 38 5 chrX 119331060 119331323 -47318973 - ORR1A4-int LTR MaLR -1688 275 1 3 1495 1747 159 33 60 chrX 119331326 119331661 -47318635 - ORR1A4 LTR MaLR -3 326 1 3 1495 562 313 37 67 chrX 119331703 119332525 -47317771 + L1MA4 LINE L1 5211 6021 -276 3 1495 27 29 0 0 chrX 119332812 119332846 -47317450 + AT_rich Low_complexity Low_complexity 1 34 0 3 1495 510 143 0 0 chrX 119333209 119333328 -47316968 + (A)n Simple_repeat Simple_repeat 1 119 0 3 1495 240 310 0 12 chrX 119333471 119333556 -47316740 + CT-rich Low_complexity Low_complexity 3 86 0 3 1495 366 279 23 0 chrX 119333872 119333958 -47316338 + RSINE1 SINE B4 3 90 -75 3 1495 412 290 22 43 chrX 119333956 119334167 -47316129 - RLTR22_Mur LTR ERVK -173 1675 1591 3 1495 4818 116 31 13 chrX 119334411 119335207 -47315089 - RLTR22_Mus LTR ERVK -997 811 1 4 1495 23 0 0 0 chrX 119335292 119335315 -47314981 + AT_rich Low_complexity Low_complexity 1 23 0 4 1495 27 92 0 0 chrX 119336217 119336293 -47314003 + AT_rich Low_complexity Low_complexity 1 76 0 4 1495 31 26 0 0 chrX 119336343 119336381 -47313915 + AT_rich Low_complexity Low_complexity 1 38 0 4 1495 323 61 41 0 chrX 119336748 119336797 -47313499 + (TTTTC)n Simple_repeat Simple_repeat 4 54 0 4 1495 476 346 6 0 chrX 119337567 119337726 -47312570 + RSINE1 SINE B4 4 163 -2 4 1495 543 324 35 45 chrX 119337726 119338066 -47312230 - MLT2B4 LTR ERVL -63 351 10 4 1495 917 315 44 21 chrX 119338565 119338905 -47311391 + Lx8 LINE L1 6837 7184 -289 4 1495 895 220 68 169 chrX 119339119 119339534 -47310762 - ORR1D1 LTR MaLR 0 374 2 4 1495 248 354 8 66 chrX 119340114 119340235 -47310061 + L2c LINE L2 3036 3149 -238 4 1495 345 393 72 35 chrX 119340542 119340890 -47309406 - MLT1I LTR MaLR -50 361 1 4 1495 29 47 0 0 chrX 119341035 119341078 -47309218 + AT_rich Low_complexity Low_complexity 1 43 0 4 1495 384 404 29 24 chrX 119341440 119341610 -47308686 - B3A SINE B2 -27 171 1 4 1495 201 378 46 0 chrX 119341838 119341989 -47308307 + MIRc SINE MIR 78 235 -33 4 1495 468 0 0 0 chrX 119342390 119342442 -47307854 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1495 237 297 44 25 chrX 119342602 119342761 -47307535 + L1MC3 LINE L1 7617 7778 -7 4 1495 356 211 62 0 chrX 119342926 119343102 -47307194 + Lx9 LINE L1 7405 7635 -9 4 1495 417 20 0 0 chrX 119343103 119343153 -47307143 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1495 944 200 124 16 chrX 119343153 119343402 -47306894 - L1_Mus4 LINE L1 -17 6619 6344 4 1495 459 326 113 21 chrX 119343582 119343689 -47306607 - ID_B1 SINE B4 -11 213 108 4 1495 510 46 0 0 chrX 119343689 119343754 -47306542 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1495 459 326 113 21 chrX 119343754 119343840 -47306456 - ID_B1 SINE B4 -117 107 2 4 1495 432 0 0 0 chrX 119344093 119344141 -47306155 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1495 2040 109 0 0 chrX 119344407 119344691 -47305605 + L1_Mur1 LINE L1 5395 5678 -208 4 1495 4613 121 38 1 chrX 119344688 119345408 -47304888 + Lx3_Mus LINE L1 6033 6778 -231 4 1495 1214 149 31 22 chrX 119345874 119346101 -47304195 + Lx3_Mus LINE L1 6773 7001 -8 4 1495 29039 127 17 26 chrX 119346120 119351586 -47298710 + L1Md_F2 LINE L1 220 5586 -297 4 1495 7138 81 4 15 chrX 119351587 119352579 -47297717 + L1Md_F2 LINE L1 5588 6568 -14 4 1495 21 57 0 0 chrX 119352605 119352640 -47297656 + AT_rich Low_complexity Low_complexity 1 35 0 4 1495 276 218 0 0 chrX 119352899 119352986 -47297310 + CT-rich Low_complexity Low_complexity 2 88 0 4 1495 227 323 34 112 chrX 119353603 119353642 -47296654 - MLT1D LTR MaLR -302 203 170 4 1495 363 96 0 0 chrX 119353642 119353694 -47296602 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1495 227 323 34 112 chrX 119353694 119353832 -47296464 - MLT1D LTR MaLR -336 169 40 4 1495 2195 81 129 11 chrX 119353986 119354335 -47295961 + RLTR10 LTR ERVK 1 390 0 4 1495 297 128 0 0 chrX 119354531 119354578 -47295718 + (TCTG)n Simple_repeat Simple_repeat 4 50 0 4 1495 830 238 53 64 chrX 119354597 119354955 -47295341 - RLTR10D LTR ERVK 0 411 1 4 1495 1439 176 25 32 chrX 119354955 119355237 -47295059 - IAP-d-int LTR ERVK 0 6542 6263 4 1495 660 270 5 5 chrX 119355278 119355464 -47294832 - IAP-d-int LTR ERVK -447 6095 5910 4 1495 7496 285 46 54 chrX 119355482 119356628 -47293668 - IAP-d-int LTR ERVK -742 5800 4626 4 1495 228 292 118 36 chrX 119356628 119356738 -47293558 - B4 SINE B4 -169 123 5 4 1495 7496 285 46 54 chrX 119356738 119358843 -47291453 - IAP-d-int LTR ERVK -742 4625 2465 4 1495 1667 199 117 10 chrX 119358871 119359249 -47291047 - IAP-d-int LTR ERVK -6100 442 22 4 1495 2696 37 0 313 chrX 119359249 119359884 -47290412 - RLTR10C LTR ERVK 0 436 1 4 1495 7895 41 4 0 chrX 119359886 119360816 -47289480 - MMERVK10C-int LTR ERVK -2 7579 6646 4 1495 41286 45 0 1 chrX 119360802 119365745 -47284551 - MMERVK10C-int LTR ERVK -1771 5810 870 4 1495 2585 95 55 3 chrX 119365743 119366122 -47284174 - MMERVK10C-int LTR ERVK -7182 399 1 4 1495 3637 46 5 0 chrX 119366122 119366556 -47283740 - RLTR10C LTR ERVK 0 436 1 4 1495 576 266 56 53 chrX 119366606 119366964 -47283332 - RLTR10D LTR ERVK 0 359 1 4 1495 900 226 5 37 chrX 119367006 119367222 -47283074 + ORR1D1 LTR MaLR 166 374 0 4 1495 292 300 49 15 chrX 119367238 119367480 -47282816 + L1MA4 LINE L1 5749 5988 -1656 4 1495 201 74 0 0 chrX 119367668 119367695 -47282601 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 4 1495 1140 257 23 23 chrX 119367878 119368177 -47282119 + Lx6 LINE L1 7133 7431 -29 4 1495 396 295 19 0 chrX 119368224 119368329 -47281967 + PB1D9 SINE Alu 1 107 -13 4 1495 242 29 29 0 chrX 119368329 119368364 -47281932 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 4 1495 1191 263 48 27 chrX 119369228 119369284 -47281012 + MTEb LTR MaLR 1 56 -323 4 1495 293 0 27 0 chrX 119369284 119369321 -47280975 + (CAA)n Simple_repeat Simple_repeat 2 39 0 4 1495 1191 263 48 27 chrX 119369321 119369635 -47280661 + MTEb LTR MaLR 57 378 -1 4 1495 7221 68 3 12 chrX 119369799 119370761 -47279535 + L1_Mus2 LINE L1 5623 6654 0 4 1495 254 353 0 0 chrX 119370781 119370849 -47279447 + ID4_ SINE ID 12 79 -4 4 1495 399 277 162 55 chrX 119370883 119371154 -47279142 + L1M4 LINE L1 1266 1565 -4977 4 1495 233 370 64 80 chrX 119371890 119372140 -47278156 - MLT1D LTR MaLR -193 312 67 4 1495 287 294 49 25 chrX 119372251 119372373 -47277923 - RMER15 LTR ERVL -130 445 321 4 1495 204 156 0 22 chrX 119372373 119372419 -47277877 + T-rich Low_complexity Low_complexity 4 48 0 4 1495 3105 178 46 72 chrX 119372487 119373658 -47276638 - Lx2 LINE L1 -17 6983 5868 4 1495 4818 184 72 22 chrX 119373886 119374840 -47275456 - Lx4B LINE L1 -63 6995 5994 4 1495 1016 102 72 88 chrX 119374892 119375085 -47275211 - B2_Mm2 SINE B2 -4 191 2 4 1495 363 75 0 0 chrX 119375086 119375139 -47275157 - Lx4B LINE L1 -1262 5796 5744 4 1495 745 313 69 52 chrX 119376480 119377030 -47273266 + RMER13A LTR ERVK 94 697 -211 4 1495 784 156 51 25 chrX 119377146 119377304 -47272992 + L1_Mur2 LINE L1 5572 5733 -144 4 1495 2778 209 77 34 chrX 119377310 119378332 -47271964 - Lx7 LINE L1 -1535 6161 5096 4 1495 532 263 51 29 chrX 119378343 119378480 -47271816 - B1_Mur1 SINE Alu -5 144 5 4 1495 1579 187 82 46 chrX 119378484 119378876 -47271420 - Lx7 LINE L1 -766 5114 4709 4 1495 871 322 161 10 chrX 119378876 119379396 -47270900 - Tigger1 DNA MER2_type -1504 914 316 4 1495 432 0 0 0 chrX 119379397 119379445 -47270851 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1495 244 298 29 166 chrX 119379577 119379621 -47270675 - RMER4B LTR ERVK -46 565 520 4 1495 2595 92 7 62 chrX 119379621 119380059 -47270237 - RLTR9F LTR ERVK -1 414 1 4 1495 845 262 172 27 chrX 119380059 119380450 -47269846 - RMER4B LTR ERVK -92 519 1 4 1495 355 247 53 21 chrX 119380461 119380556 -47269740 - Tigger1 DNA MER2_type -2239 179 82 4 1495 323 253 66 115 chrX 119380848 119381031 -47269265 + RMER17C-int LTR ERVK 2610 2783 -455 4 1495 335 238 45 83 chrX 119381040 119381173 -47269123 + RMER17C-int LTR ERVK 2756 2883 -355 4 1495 468 250 267 8 chrX 119381534 119381792 -47268504 + RLTR28B LTR ERVL 7 331 -150 4 1495 21 0 0 0 chrX 119381972 119381993 -47268303 + AT_rich Low_complexity Low_complexity 1 21 0 4 1495 28 48 0 0 chrX 119382123 119382165 -47268131 + AT_rich Low_complexity Low_complexity 1 42 0 4 1495 204 158 0 0 chrX 119383436 119383474 -47266822 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 4 1495 422 333 0 0 chrX 119384095 119384230 -47266066 + B1_Mur2 SINE Alu 4 138 -11 4 1495 24 32 0 0 chrX 119384334 119384365 -47265931 + AT_rich Low_complexity Low_complexity 1 31 0 4 1495 1419 93 0 0 chrX 119384375 119384569 -47265727 + B2_Mm2 SINE B2 2 195 0 4 1495 1450 279 64 31 chrX 119384604 119384714 -47265582 + RLTR12A LTR ERVK 1 105 -463 4 1495 2952 85 17 114 chrX 119384714 119385248 -47265048 + RLTR45 LTR ERVK 1 482 0 4 1495 1450 279 64 31 chrX 119385248 119385687 -47264609 + RLTR12A LTR ERVK 106 568 0 4 1495 474 337 51 11 chrX 119386293 119386470 -47263826 - RMER13A LTR ERVK -175 685 502 4 1495 217 154 26 0 chrX 119386477 119386516 -47263780 + (TCTA)n Simple_repeat Simple_repeat 3 42 0 4 1495 354 307 105 42 chrX 119386520 119386806 -47263490 + L1M5 LINE L1 3792 4095 -2051 4 1495 23 0 0 0 chrX 119386875 119386898 -47263398 + AT_rich Low_complexity Low_complexity 1 23 0 4 1495 991 116 0 33 chrX 119387018 119387170 -47263126 + B1_Mus1 SINE Alu 2 148 0 4 1495 23 54 0 0 chrX 119387170 119387207 -47263089 + AT_rich Low_complexity Low_complexity 1 37 0 4 1495 322 291 112 36 chrX 119387210 119387406 -47262890 + L1MC LINE L1 4304 4514 -1632 4 1495 233 312 0 0 chrX 119387522 119387586 -47262710 + L1MC LINE L1 4716 4779 -1367 4 1495 37576 18 1 7 chrX 119387776 119392837 -47257459 + L1Md_A LINE L1 567 5586 -297 4 1495 8623 20 2 0 chrX 119392838 119393831 -47256465 + L1Md_A LINE L1 5588 6582 0 4 1495 21 0 0 0 chrX 119394424 119394445 -47255851 + AT_rich Low_complexity Low_complexity 1 21 0 4 1495 520 234 15 59 chrX 119394512 119394631 -47255665 - MTB_Mm LTR MaLR -2 405 293 4 1495 2266 216 15 43 chrX 119394631 119395152 -47255144 + RMER19C LTR ERVK 1 604 -7 4 1495 974 328 105 20 chrX 119395153 119395278 -47255018 - RMER15 LTR ERVL -73 502 379 4 1495 225 0 0 0 chrX 119395278 119395303 -47254993 + (CAA)n Simple_repeat Simple_repeat 3 27 0 4 1495 974 328 105 20 chrX 119395303 119395616 -47254680 - RMER15 LTR ERVL -197 378 28 4 1495 2338 263 99 37 chrX 119395667 119395872 -47254424 - Lx6 LINE L1 0 7460 7249 4 1495 1594 165 60 72 chrX 119395872 119396205 -47254091 - ORR1A4 LTR MaLR 0 329 1 4 1495 2338 263 99 37 chrX 119396205 119396786 -47253510 - Lx6 LINE L1 -212 7248 6625 4 1495 190 193 17 17 chrX 119397179 119397237 -47253059 + GA-rich Low_complexity Low_complexity 2 59 0 4 1495 421 383 62 0 chrX 119397762 119397924 -47252372 + B3A SINE B2 27 198 0 4 1495 344 350 0 0 chrX 119398100 119398257 -47252039 + (TA)n Simple_repeat Simple_repeat 1 157 0 4 1495 25 0 0 0 chrX 119398431 119398456 -47251840 + AT_rich Low_complexity Low_complexity 1 25 0 4 1495 379 241 277 6 chrX 119399789 119399948 -47250348 + B3 SINE B2 2 203 -13 4 1495 3767 93 0 0 chrX 119400062 119400568 -47249728 + L1_Mus1 LINE L1 6062 6567 0 4 1495 333 82 0 0 chrX 119400586 119400635 -47249661 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 4 1495 4306 158 57 19 chrX 119400685 119401574 -47248722 + L1Md_F2 LINE L1 208 1138 -5586 4 1495 1331 85 32 5 chrX 119401574 119401764 -47248532 + B2_Mm2 SINE B2 1 195 0 4 1495 4306 115 18 8 chrX 119401764 119402020 -47248276 + L1Md_F2 LINE L1 1124 1382 -4501 4 1495 17931 87 5 2 chrX 119402016 119404525 -47245771 + L1Md_F2 LINE L1 3069 5585 -298 4 1495 7235 75 11 4 chrX 119404526 119405515 -47244781 + L1Md_F2 LINE L1 5587 6582 0 4 186 3300 235 64 67 chrX 119406252 119407189 -47243107 + Lx5 LINE L1 6117 7050 0 4 1496 187 365 124 29 chrX 119407349 119407558 -47242738 - L2 LINE L2 -1304 2115 1887 4 1496 230 365 0 0 chrX 119408243 119408317 -47241979 + MIRc SINE MIR 108 181 -87 4 1496 2413 148 19 14 chrX 119408446 119408865 -47241431 + BGLII LTR ERVK 1 421 0 4 1496 564 129 10 29 chrX 119409966 119410070 -47240226 - RLTR9E LTR ERVK 0 393 292 4 1496 1228 38 0 31 chrX 119410070 119410153 -47240143 + B2_Mm1a SINE B2 4 86 -107 5 1496 2694 68 146 138 chrX 119410153 119410661 -47239635 - RLTR1B LTR ERV1 0 512 1 5 1496 1228 38 0 31 chrX 119410661 119410740 -47239556 + B2_Mm1a SINE B2 87 161 -32 5 1496 240 35 0 0 chrX 119410741 119410770 -47239526 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 5 1496 1524 124 122 20 chrX 119410782 119411077 -47239219 - RLTR9E LTR ERVK -84 325 1 4 1496 455 110 0 40 chrX 119411079 119411155 -47239141 - ETnERV2-int LTR ERVK -3 7403 7331 4 1496 1635 204 206 11 chrX 119411155 119411606 -47238690 - RLTR13D6 LTR ERVK -363 539 1 5 1496 1678 124 8 8 chrX 119411617 119411869 -47238427 - ETnERV3-int LTR ERVK -28 5780 5529 5 1496 3267 178 51 102 chrX 119411845 119412888 -47237408 - ETnERV2-int LTR ERVK -1801 5443 4960 4 1496 2652 60 157 139 chrX 119412888 119413391 -47236905 - RLTR1B LTR ERV1 0 512 1 5 1496 3419 156 55 52 chrX 119413391 119414277 -47236019 - ETnERV2-int LTR ERVK -2285 4959 3441 4 1496 1620 192 212 23 chrX 119414293 119414764 -47235532 - ETnERV2-int LTR ERVK -4419 2987 2428 4 1496 3211 198 33 64 chrX 119414763 119415639 -47234657 - MMETn-int LTR ERVK -3675 1169 321 5 1496 922 210 4 111 chrX 119415733 119416012 -47234284 - MMETn-int LTR ERVK -4594 250 2 5 1496 300 106 0 0 chrX 119416014 119416061 -47234235 - RLTR9C LTR ERVK 0 393 347 5 1496 1224 143 14 28 chrX 119416056 119416271 -47234025 + BGLII LTR ERVK 210 421 0 5 1496 203 79 26 0 chrX 119416981 119417019 -47233277 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1496 1121 75 7 0 chrX 119417023 119417169 -47233127 - B1_Mm SINE Alu 0 147 1 5 1496 396 318 97 20 chrX 119417567 119417763 -47232533 + ID_B1 SINE B4 2 212 -12 5 1496 387 283 48 26 chrX 119417868 119418140 -47232156 - L1ME2z LINE L1 -448 5996 5719 5 1496 715 175 51 57 chrX 119418144 119418320 -47231976 - RMER6C LTR ERVK -358 332 158 5 1496 430 318 128 40 chrX 119418364 119418613 -47231683 - RMER5 LTR ERV1 -2 532 262 5 1496 31 0 0 0 chrX 119418620 119418651 -47231645 + AT_rich Low_complexity Low_complexity 1 31 0 5 1496 684 287 47 159 chrX 119418692 119419119 -47231177 - MTE2a LTR MaLR 0 379 1 5 1496 519 278 45 0 chrX 119419121 119419254 -47231042 - RMER5 LTR ERV1 -381 153 15 5 1496 629 36 12 0 chrX 119419288 119419372 -47230924 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 5 1496 856 254 35 32 chrX 119419439 119419866 -47230430 + MT2A LTR ERVL 1 554 -47 5 1496 1245 163 80 107 chrX 119419915 119420251 -47230045 + ORR1A4 LTR MaLR 1 327 -2 5 1496 4394 264 64 8 chrX 119420251 119421378 -47228918 + MERVL_2A-int LTR ERVL 1477 2669 -3092 5 1496 6189 101 14 7 chrX 119421378 119422273 -47228023 - RLTR13D6 LTR ERVK 0 902 1 5 1496 4394 264 64 8 chrX 119422273 119422414 -47227882 + MERVL_2A-int LTR ERVL 2670 2816 -2945 5 1496 303 254 0 0 chrX 119422387 119422454 -47227842 + MERVL_2A-int LTR ERVL 4872 4938 -547 5 1496 308 261 67 67 chrX 119422455 119422480 -47227816 + CYRA11_Mm Unknown Y-chromosome 149 268 -349 5 1496 628 204 45 0 chrX 119422480 119422612 -47227684 - URR1B DNA MER1_type 0 225 88 5 1496 2426 220 44 10 chrX 119422669 119423280 -47227016 + MERVL_2A-int LTR ERVL 5059 5690 -71 5 1496 3871 219 62 9 chrX 119423332 119424833 -47225463 - Lx4B LINE L1 -333 6725 5107 5 1496 3313 158 105 69 chrX 119424833 119425146 -47225150 + RMER17D2 LTR ERVK 1 345 -464 5 1496 682 67 9 9 chrX 119425146 119425252 -47225044 + (TC)n Simple_repeat Simple_repeat 2 107 0 5 1496 3313 158 105 69 chrX 119425252 119425719 -47224577 + RMER17D2 LTR ERVK 346 808 -1 5 1496 9238 193 15 37 chrX 119425719 119426319 -47223977 - Lx4B LINE L1 -765 5112 4530 5 1496 2948 81 5 8 chrX 119426319 119426716 -47223580 - MTA_Mm LTR MaLR 0 396 1 5 1496 9238 193 15 37 chrX 119426716 119428255 -47222041 - Lx4B LINE L1 -1348 4529 3020 5 1496 12940 74 13 5 chrX 119428242 119429566 -47220730 - L1Md_F2 LINE L1 -1 6581 5249 5 1496 369 0 0 0 chrX 119429566 119429607 -47220689 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 1496 12940 75 18 6 chrX 119429607 119430729 -47219567 - L1Md_F2 LINE L1 -635 5248 4109 5 1496 324 258 0 43 chrX 119431419 119431512 -47218784 + PB1D10 SINE Alu 26 114 -3 5 1496 1159 146 75 23 chrX 119431653 119431919 -47218377 - MusHAL1 LINE L1 -1789 923 644 5 1496 291 0 0 0 chrX 119431922 119431957 -47218339 - MERVL-int LTR ERVL -3 5482 5448 5 1496 392 167 46 35 chrX 119431957 119432044 -47218252 - ORR1A3-int LTR MaLR -1323 640 553 5 1496 1163 28 7 0 chrX 119432044 119432188 -47218108 - MERVL-int LTR ERVL -125 5360 5216 5 1496 2125 91 70 3 chrX 119432188 119432529 -47217767 - MusHAL1 LINE L1 -2066 646 283 5 1496 23 68 0 0 chrX 119432529 119432573 -47217723 + AT_rich Low_complexity Low_complexity 1 44 0 5 1496 5662 121 10 1 chrX 119432687 119433556 -47216740 - L1_Mus3 LINE L1 0 6638 5762 5 1496 17999 168 30 64 chrX 119433565 119437779 -47212517 - L1Md_F LINE L1 -1483 4400 243 5 1496 1978 93 1 8 chrX 119437786 119438240 -47212056 - L1VL2 LINE L1 -2417 1198 751 5 1496 38163 50 22 13 chrX 119438236 119444560 -47205736 - L1Md_A LINE L1 0 6582 201 5 1496 297 0 0 0 chrX 119444576 119444609 -47205687 + (T)n Simple_repeat Simple_repeat 1 33 0 5 1496 3077 153 62 0 chrX 119444609 119445153 -47205143 - L1VL2 LINE L1 -5581 754 177 5 1496 2166 143 16 0 chrX 119445156 119445736 -47204560 - L1VL4 LINE L1 -2259 1300 707 5 1496 467 196 11 11 chrX 119445736 119445829 -47204467 + B1_Mm SINE Alu 53 145 -2 5 1496 192 77 0 0 chrX 119445839 119445865 -47204431 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 5 1496 23 0 0 0 chrX 119448042 119448065 -47202231 + AT_rich Low_complexity Low_complexity 1 23 0 5 1496 3711 175 10 13 chrX 119448073 119448768 -47201528 - Lx3B LINE L1 -52 6921 6229 5 1496 18224 70 253 1 chrX 119449551 119454250 -47196046 - L1Md_F3 LINE L1 -16 6568 629 5 1496 1964 170 6 0 chrX 119455084 119455408 -47194888 - ORR1A3 LTR MaLR 0 326 1 5 1496 397 125 521 0 chrX 119456516 119456612 -47193684 + B1_Mus1 SINE Alu 2 147 -1 5 1496 2670 36 6 209 chrX 119457243 119457732 -47192564 + RLTR10 LTR ERVK 1 390 0 5 1496 15101 20 54 1 chrX 119457794 119459669 -47190627 + RLTR10-int LTR ERVK 13 1987 0 5 1496 2670 36 6 209 chrX 119459669 119460158 -47190138 + RLTR10 LTR ERVK 1 390 0 5 1496 525 250 75 0 chrX 119460177 119460337 -47189959 + L1_Mur2 LINE L1 907 1078 -6008 5 1496 2417 204 2 7 chrX 119460350 119460914 -47189382 + L1_Mur2 LINE L1 1203 1763 -4114 5 1496 755 220 0 0 chrX 119462617 119462794 -47187502 + L1_Mur2 LINE L1 1753 1929 -3957 5 1496 2744 192 32 59 chrX 119462797 119463398 -47186898 + L1_Mur2 LINE L1 5065 5662 -215 5 1496 1167 75 0 0 chrX 119463398 119463544 -47186752 - B1_Mm SINE Alu -1 146 1 5 1496 2744 192 32 59 chrX 119463544 119463656 -47186640 + L1_Mur2 LINE L1 5663 5759 -118 5 1496 2829 239 8 1 chrX 119463654 119464300 -47185996 + Lx5 LINE L1 6164 6813 -237 5 1496 1880 227 45 45 chrX 119464325 119464810 -47185486 + RLTR11A2 LTR ERVK 2 486 -41 5 1496 738 69 0 0 chrX 119464810 119464911 -47185385 + L1_Mus3 LINE L1 5768 5868 -770 5 1496 362 245 133 62 chrX 119464983 119465096 -47185200 + B1_Mur3 SINE Alu 18 138 -11 5 1496 972 254 78 23 chrX 119465258 119465510 -47184786 + MYSERV-int LTR ERVK 4277 4624 -4335 5 1496 519 31 0 0 chrX 119465510 119465575 -47184721 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1496 180 0 0 0 chrX 119465575 119465594 -47184702 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 1496 972 250 78 21 chrX 119465594 119465714 -47184582 + MYSERV-int LTR ERVK 4490 4625 -1925 5 1496 562 285 14 0 chrX 119466208 119466352 -47183944 + ID_B1 SINE B4 79 224 0 5 1496 211 0 57 29 chrX 119466355 119466390 -47183906 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 5 1496 516 219 0 0 chrX 119466529 119466652 -47183644 + (CA)n Simple_repeat Simple_repeat 2 124 0 5 1496 302 337 0 0 chrX 119466652 119466753 -47183543 + (TA)n Simple_repeat Simple_repeat 2 102 0 5 1496 4443 65 24 27 chrX 119467466 119468055 -47182241 - LTRIS_Mus LTR ERV1 0 587 1 5 1496 10704 92 5 2 chrX 119468207 119470430 -47179866 - L1Md_F2 LINE L1 -4 6578 4351 5 1496 271 354 55 23 chrX 119471010 119471144 -47179152 - MIR SINE MIR -95 173 30 5 1496 631 208 13 57 chrX 119471341 119471478 -47178818 - RMER17B LTR ERVK 0 958 823 5 1496 2495 46 2 252 chrX 119471478 119471998 -47178298 + RLTR10 LTR ERVK 1 390 0 5 1496 631 208 13 57 chrX 119471998 119472018 -47178278 - RMER17B LTR ERVK -136 822 808 5 1496 7481 33 3 26 chrX 119472019 119472982 -47177314 + RLTR10-int LTR ERVK 52 992 -995 5 1496 320 289 12 25 chrX 119473026 119473189 -47177107 + RLTR10-int LTR ERVK 1434 1594 -5987 5 1496 8341 22 0 0 chrX 119473271 119474266 -47176030 + RLTR10-int LTR ERVK 990 1984 -3 5 1496 2535 31 2 276 chrX 119474268 119474805 -47175491 + RLTR10 LTR ERVK 1 390 0 5 1496 2499 202 38 12 chrX 119474841 119475710 -47174586 - RMER6-int LTR ERVK -4 3173 2357 5 1496 300 27 0 0 chrX 119475760 119475797 -47174499 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1496 3799 142 104 11 chrX 119475840 119476144 -47174152 - RMER17D2 LTR ERVK 0 809 453 5 1496 546 16 0 0 chrX 119476144 119476207 -47174089 + (GA)n Simple_repeat Simple_repeat 2 64 0 5 1496 3799 142 104 11 chrX 119476207 119476642 -47173654 - RMER17D2 LTR ERVK -357 452 1 5 1496 11746 125 19 4 chrX 119476765 119477672 -47172624 - L1Md_F LINE L1 -641 3176 2260 5 1496 233 29 29 0 chrX 119477672 119477706 -47172590 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1496 11746 149 14 33 chrX 119477706 119479428 -47170868 - L1Md_F LINE L1 -1558 2259 578 5 1496 3035 174 7 5 chrX 119479482 119480054 -47170242 + L1_Mm LINE L1 5309 5881 -2 5 1496 657 217 128 35 chrX 119480055 119480227 -47170069 - RLTR20B3 LTR ERVK -369 208 21 5 1496 313 261 30 65 chrX 119480662 119480830 -47169466 - RMER6-int LTR ERVK -4122 1400 1239 5 1496 21 0 0 0 chrX 119480917 119480938 -47169358 + AT_rich Low_complexity Low_complexity 1 21 0 5 1496 21 57 0 0 chrX 119481803 119481838 -47168458 + AT_rich Low_complexity Low_complexity 1 35 0 5 1496 2075 291 102 55 chrX 119481849 119483075 -47167221 - Lx9 LINE L1 -20 7624 6341 5 1496 590 39 13 0 chrX 119483082 119483159 -47167137 + (TC)n Simple_repeat Simple_repeat 2 79 0 5 1496 837 239 76 21 chrX 119483423 119483714 -47166582 - Lx9 LINE L1 -1637 6007 5701 5 1496 521 312 0 5 chrX 119484529 119484729 -47165567 + Lx9 LINE L1 6674 6872 -772 5 1496 243 0 0 0 chrX 119484804 119484831 -47165465 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1496 207 200 0 0 chrX 119484834 119484874 -47165422 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 5 1496 2213 134 53 5 chrX 119484890 119484932 -47165364 - Lx LINE L1 -6 6648 6607 5 1496 4462 86 5 2 chrX 119484932 119485535 -47164761 - L1_Mus3 LINE L1 0 6638 6034 5 1496 2213 134 53 5 chrX 119485535 119485600 -47164696 - Lx LINE L1 -48 6606 6540 5 1496 189 0 0 0 chrX 119485600 119485621 -47164675 + (CCCA)n Simple_repeat Simple_repeat 1 21 0 5 1496 2213 134 53 5 chrX 119485621 119485925 -47164371 - Lx LINE L1 -115 6539 6219 5 1496 3725 207 19 8 chrX 119486192 119487043 -47163253 + L1_Mur2 LINE L1 4684 5543 -334 5 1496 520 174 27 9 chrX 119487049 119487159 -47163137 - L1_Mur2 LINE L1 -984 4893 4782 5 1496 405 0 0 0 chrX 119487180 119487225 -47163071 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 5 1496 6348 133 17 11 chrX 119487225 119487305 -47162991 - Lx3A LINE L1 -13 6968 6895 5 1496 2891 33 0 3 chrX 119487305 119487643 -47162653 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 1496 6348 133 17 11 chrX 119487643 119488595 -47161701 - Lx3A LINE L1 -87 6894 5929 5 1496 10831 99 22 4 chrX 119488597 119490318 -47159978 - Lx3_Mus LINE L1 -965 6044 4286 5 1496 233 75 25 0 chrX 119490318 119490358 -47159938 + (TTA)n Simple_repeat Simple_repeat 1 41 0 5 1496 10831 103 28 3 chrX 119490358 119490504 -47159792 - Lx3_Mus LINE L1 -1601 4285 4142 5 1496 2528 107 0 5 chrX 119490500 119490904 -47159392 + Lx3_Mus LINE L1 3783 4184 -1702 5 1496 284 220 88 0 chrX 119490897 119490988 -47159308 - L1_Mur2 LINE L1 -1081 4796 4698 5 1496 3246 259 16 20 chrX 119490988 119491826 -47158470 + Lx5 LINE L1 6214 7047 -3 5 1496 228 214 109 33 chrX 119491898 119491990 -47158306 + L1M4 LINE L1 4773 4871 -1275 5 1496 573 297 63 39 chrX 119492498 119492862 -47157434 - L1MA6 LINE L1 -285 6015 5643 5 1496 3481 143 2 8 chrX 119493467 119494059 -47156237 - Lx3B LINE L1 -378 6595 6008 5 1496 888 358 49 7 chrX 119494071 119494625 -47155671 - Lx9 LINE L1 -706 6938 6362 5 1496 623 269 17 13 chrX 119494945 119495182 -47155114 + Lx7 LINE L1 2200 2437 -3443 5 1496 3154 256 50 7 chrX 119495191 119495346 -47154950 + Lx7 LINE L1 4463 4624 -1256 5 1496 414 0 0 0 chrX 119495346 119495392 -47154904 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1496 3154 256 50 7 chrX 119495392 119496287 -47154009 + Lx7 LINE L1 4625 5557 -323 5 1496 201 121 0 0 chrX 119496287 119496320 -47153976 + (TCC)n Simple_repeat Simple_repeat 2 34 0 5 1496 1882 143 22 16 chrX 119496398 119496717 -47153579 - ORR1A4 LTR MaLR -8 321 1 6 1496 3901 303 58 22 chrX 119496723 119498385 -47151911 + Lx7 LINE L1 5625 7346 -350 5 1496 244 300 70 0 chrX 119498993 119499093 -47151203 + B3 SINE B2 109 215 -1 6 1496 262 222 0 53 chrX 119499165 119499241 -47151055 + L1MA5 LINE L1 5869 5940 -360 6 1496 3574 52 5 2 chrX 119499523 119500000 -47150296 + L1Md_F2 LINE L1 5649 6099 -483 6 1496 3773 53 0 2 chrX 119500000 119500472 -47149824 + L1Md_F2 LINE L1 6100 6570 -12 1 1496 441 287 35 55 chrX 119501587 119501786 -47148510 - MTEb LTR MaLR -3 376 182 2 1496 821 50 0 0 chrX 119501786 119501885 -47148411 + L1Md_F2 LINE L1 6242 6340 -242 3 1496 22 35 0 0 chrX 119502172 119502201 -47148095 + AT_rich Low_complexity Low_complexity 1 29 0 4 1496 198 0 0 0 chrX 119502949 119502971 -47147325 + (TA)n Simple_repeat Simple_repeat 2 23 0 5 1496 614 317 53 11 chrX 119503179 119503367 -47146929 - B3 SINE B2 -20 196 1 6 1496 3168 56 8 0 chrX 119503393 119503786 -47146510 + MTA_Mm LTR MaLR 1 396 0 7 1496 7840 84 8 3 chrX 119503786 119504878 -47145418 + MTA_Mm-int LTR MaLR 1 1098 0 7 1496 3303 38 5 0 chrX 119504878 119505272 -47145024 + MTA_Mm LTR MaLR 1 396 0 7 1496 241 233 53 40 chrX 119505274 119505350 -47144946 - ID_B1 SINE B4 -21 203 127 8 1496 533 265 20 80 chrX 119506248 119506344 -47143952 + Lx8 LINE L1 6761 6844 -629 9 1496 4416 37 4 9 chrX 119506344 119506883 -47143413 + L1Md_F2 LINE L1 6047 6582 0 1 1496 533 265 20 80 chrX 119506883 119506987 -47143309 + Lx8 LINE L1 6845 6949 -524 9 1496 865 167 192 14 chrX 119507035 119507254 -47143042 + Lx3A LINE L1 6716 6973 -8 1 1496 300 83 0 0 chrX 119507369 119507417 -47142879 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 1496 339 44 0 0 chrX 119507502 119507547 -47142749 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 1 1496 789 90 0 0 chrX 119510387 119510498 -47139798 + (CTG)n Simple_repeat Simple_repeat 3 113 0 1 1496 314 300 13 39 chrX 119510716 119510872 -47139424 + (CGG)n Simple_repeat Simple_repeat 1 152 0 1 1496 28 0 0 0 chrX 119513421 119513449 -47136847 + AT_rich Low_complexity Low_complexity 1 28 0 1 1496 327 283 197 16 chrX 119513862 119513984 -47136312 - RSINE1 SINE B4 -8 157 14 1 1496 412 103 51 0 chrX 119514044 119514122 -47136174 + CT-rich Low_complexity Low_complexity 4 85 0 1 1496 449 299 156 33 chrX 119514322 119514920 -47135376 - L1ME1 LINE L1 -184 5995 5325 1 1496 229 321 82 9 chrX 119515254 119515364 -47134932 - L1ME1 LINE L1 -1201 4945 4828 1 1496 3480 158 3 0 chrX 119515760 119516372 -47133924 - Lx2 LINE L1 0 6997 6384 2 1496 21 0 0 0 chrX 119516459 119516480 -47133816 + AT_rich Low_complexity Low_complexity 1 21 0 2 1496 22 0 0 0 chrX 119516537 119516559 -47133737 + AT_rich Low_complexity Low_complexity 1 22 0 2 1496 379 226 0 47 chrX 119516785 119516892 -47133404 - L1MA9 LINE L1 -406 5906 5805 2 1496 3603 147 39 2 chrX 119516910 119517531 -47132765 - Lx3A LINE L1 -3 6978 6335 2 1496 235 241 181 0 chrX 119517541 119517624 -47132672 + BGLII_B LTR ERVK 86 183 -258 2 1496 841 253 68 49 chrX 119517617 119517924 -47132372 + RLTR31_Mur LTR ERVK 241 553 0 2 1496 4316 108 3 9 chrX 119517926 119518569 -47131727 - Lx3A LINE L1 -635 6346 5708 2 1496 342 45 0 0 chrX 119518718 119518762 -47131534 + (TAAA)n Simple_repeat Simple_repeat 4 47 0 2 1496 1216 128 33 81 chrX 119519062 119519333 -47130963 + RLTRETN_Mm LTR ERVK 65 322 0 2 1496 770 271 16 10 chrX 119519586 119519780 -47130516 + B3 SINE B2 20 214 -2 3 1496 34 24 0 0 chrX 119519780 119519821 -47130475 + AT_rich Low_complexity Low_complexity 1 41 0 3 1496 350 159 14 0 chrX 119520577 119520646 -47129650 + CT-rich Low_complexity Low_complexity 4 73 0 3 1496 328 196 50 20 chrX 119520670 119520769 -47129527 - Lx2B LINE L1 0 7000 6899 3 1496 6185 161 24 16 chrX 119520946 119522023 -47128273 - Lx2B LINE L1 -92 6908 5823 3 1496 252 22 67 0 chrX 119522086 119522131 -47128165 + (CAAAAA)n Simple_repeat Simple_repeat 2 49 0 3 1496 22 0 0 0 chrX 119522194 119522216 -47128080 + AT_rich Low_complexity Low_complexity 1 22 0 3 1496 3682 263 44 21 chrX 119522216 119523178 -47127118 - Lx5 LINE L1 -3 7047 6064 3 1496 2405 183 164 12 chrX 119523199 119523865 -47126431 + Lx5 LINE L1 5184 5956 -1094 3 1496 226 305 122 19 chrX 119524172 119524279 -47126017 + MIR SINE MIR 23 140 -122 3 1496 826 217 149 0 chrX 119524318 119524493 -47125803 + B3 SINE B2 5 205 -11 3 1496 2979 301 79 10 chrX 119525084 119526097 -47124199 - Lx6 LINE L1 -11 7449 6367 4 1496 3144 201 37 18 chrX 119526140 119526870 -47123426 + L1_Mur3 LINE L1 4809 5552 -328 4 1496 973 153 23 28 chrX 119526870 119527067 -47123229 + ORR1A4 LTR MaLR 1 206 -140 4 1496 190 371 0 9 chrX 119527202 119527308 -47122988 + MIR SINE MIR 114 218 -44 3 1496 456 51 0 0 chrX 119527406 119527465 -47122831 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1496 430 204 260 45 chrX 119528016 119528216 -47122080 + Lx9 LINE L1 7389 7631 -13 4 1496 25 51 0 0 chrX 119528709 119528748 -47121548 + AT_rich Low_complexity Low_complexity 1 39 0 4 1496 682 221 7 7 chrX 119528756 119528893 -47121403 - B1_Mur4 SINE Alu -8 142 6 4 1496 696 264 25 43 chrX 119529203 119529365 -47120931 - RSINE1 SINE B4 -4 161 3 4 1496 25 0 0 0 chrX 119529452 119529477 -47120819 + AT_rich Low_complexity Low_complexity 1 25 0 4 1496 629 123 5 26 chrX 119530746 119530878 -47119418 + RMER17D2 LTR ERVK 5 132 -510 4 1496 207 0 0 0 chrX 119530924 119530947 -47119349 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1496 5811 111 53 6 chrX 119530974 119531883 -47118413 + RMER17A-int LTR ERVK 773 1724 -4 4 1496 1964 133 7 7 chrX 119531887 119532197 -47118099 + RMER17D2 LTR ERVK 1 310 -499 4 1496 1828 157 28 22 chrX 119532172 119532199 -47118097 + RMER17D2 LTR ERVK 449 473 -336 4 1496 880 106 29 0 chrX 119532199 119532369 -47117927 + (TC)n Simple_repeat Simple_repeat 2 176 0 5 1496 1828 157 28 22 chrX 119532369 119532700 -47117596 + RMER17D2 LTR ERVK 474 808 -1 4 1496 987 90 0 0 chrX 119533639 119533772 -47116524 + B2_Mm2 SINE B2 2 134 -61 5 1496 1152 44 12 6 chrX 119534280 119534440 -47115856 - L1Md_F2 LINE L1 -1 6581 6421 5 1496 364 248 211 79 chrX 119534753 119535033 -47115263 - RLTR22_Mur LTR ERVK 0 1848 1532 5 1496 357 189 0 13 chrX 119535035 119535110 -47115186 - RMER12 LTR ERVK -1248 74 1 5 1496 348 272 152 62 chrX 119535565 119535874 -47114422 - Charlie1 DNA MER1_type -4 2777 2441 5 1496 4540 69 35 2 chrX 119535885 119536492 -47113804 - L1_Mus1 LINE L1 0 6567 5941 5 1496 230 361 101 11 chrX 119537094 119537273 -47113023 - L2 LINE L2 -1222 2197 2003 5 1496 288 0 0 0 chrX 119537273 119537305 -47112991 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 5 23 7976 129 20 7 chrX 119537308 119539073 -47111223 - Lx3A LINE L1 -17 6964 5174 6 1497 19734 104 13 22 chrX 119539074 119542168 -47108128 + Lx3A LINE L1 2088 5154 -732 6 1497 283 354 87 33 chrX 119542168 119542352 -47107944 - L2 LINE L2 -1408 2011 1818 5 1497 21 71 0 0 chrX 119542553 119542595 -47107701 + AT_rich Low_complexity Low_complexity 1 42 0 6 1497 239 366 35 18 chrX 119545030 119545144 -47105152 + MIR SINE MIR 58 173 -89 6 1497 423 306 115 0 chrX 119545225 119545382 -47104914 + MIR SINE MIR 65 239 -23 6 1497 21 57 0 0 chrX 119545808 119545843 -47104453 + AT_rich Low_complexity Low_complexity 1 35 0 6 1497 514 348 124 53 chrX 119547297 119547676 -47102620 - MTD LTR MaLR -13 406 1 6 1497 317 351 111 20 chrX 119547678 119547922 -47102374 + L1MD3 LINE L1 6724 6989 -1006 6 1497 4899 197 94 4 chrX 119548006 119548375 -47101921 - ORR1A2-int LTR MaLR -729 1234 860 6 1497 200 59 29 0 chrX 119548375 119548409 -47101887 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1497 3152 68 37 16 chrX 119548411 119548842 -47101454 - L1Md_F2 LINE L1 -19 6563 6124 6 1497 4899 197 94 4 chrX 119548842 119549601 -47100695 - ORR1A2-int LTR MaLR -1104 859 9 6 1497 1359 98 7 0 chrX 119549601 119549816 -47100480 - ORR1A2 LTR MaLR 0 346 128 6 1497 1965 255 54 5 chrX 119549950 119550502 -47099794 - Lx9 LINE L1 -7 7637 7059 7 1497 1757 132 61 3 chrX 119550499 119550795 -47099501 - L1_Mur1 LINE L1 -288 5598 5286 7 1497 2660 124 55 16 chrX 119550795 119551228 -47099068 + Lx3B LINE L1 6521 6970 -3 7 1497 231 154 0 0 chrX 119551261 119551300 -47098996 + ORR1A3 LTR MaLR 272 310 -16 7 1497 780 335 59 0 chrX 119551313 119551600 -47098696 - RCHARR1 DNA MER1_type -637 337 34 7 1497 561 271 54 5 chrX 119551820 119552024 -47098272 + L1_Rod LINE L1 464 677 -6495 7 1497 7568 52 0 6 chrX 119552927 119553846 -47096450 + L1_Mm LINE L1 4669 5586 -297 7 1497 7878 52 3 1 chrX 119553846 119554828 -47095468 + L1Md_F2 LINE L1 5587 6570 -12 7 1497 7568 52 0 6 chrX 119554828 119554859 -47095437 + L1_Mm LINE L1 5587 5613 -270 7 1497 526 268 0 92 chrX 119555664 119555816 -47094480 + B1F2 SINE Alu 12 149 0 7 1497 204 284 51 68 chrX 119555898 119556015 -47094281 - L2a LINE L2 -5 3421 3307 7 1497 269 318 58 30 chrX 119556562 119556734 -47093562 + MIR SINE MIR 78 261 -7 8 1497 1911 264 63 115 chrX 119557073 119558104 -47092192 + RMER17B LTR ERVK 5 857 -3 8 1497 2467 106 53 0 chrX 119558131 119558472 -47091824 - RLTR10D LTR ERVK 0 359 1 8 1497 49772 71 13 14 chrX 119558472 119565023 -47085273 - IAP-d-int LTR ERVK 0 6542 1 8 1497 2450 108 53 0 chrX 119565023 119565364 -47084932 - RLTR10D LTR ERVK 0 359 1 8 1497 413 315 79 52 chrX 119565513 119565804 -47084492 - Lx8 LINE L1 -193 7280 6982 8 1497 206 293 0 0 chrX 119566454 119566529 -47083767 + A-rich Low_complexity Low_complexity 1 75 0 8 1497 29206 117 4 5 chrX 119567319 119570410 -47079886 - L1_Mus1 LINE L1 0 6567 3490 8 1497 369 0 0 0 chrX 119570410 119570451 -47079845 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 8 1497 29206 148 17 10 chrX 119570451 119573585 -47076711 - L1_Mus1 LINE L1 -2394 3489 384 8 1497 25 31 0 0 chrX 119573859 119573891 -47076405 + AT_rich Low_complexity Low_complexity 1 32 0 8 1497 21 36 0 0 chrX 119574683 119574711 -47075585 + AT_rich Low_complexity Low_complexity 1 28 0 8 1497 1098 58 0 0 chrX 119574715 119574852 -47075444 + B1_Mus2 SINE Alu 2 138 -9 8 1497 301 0 68 0 chrX 119574852 119574896 -47075400 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 9 1497 48 18 0 0 chrX 119574977 119575032 -47075264 + AT_rich Low_complexity Low_complexity 1 55 0 9 1497 336 24 0 0 chrX 119576134 119576175 -47074121 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 1497 446 370 83 28 chrX 119576180 119576332 -47073964 - B4A SINE B4 -23 269 110 9 1497 663 13 0 0 chrX 119576332 119576408 -47073888 + (TAGA)n Simple_repeat Simple_repeat 4 79 0 9 1497 446 370 83 28 chrX 119576408 119576508 -47073788 - B4A SINE B4 -183 109 4 9 1497 287 325 107 41 chrX 119577099 119577221 -47073075 - ID_B1 SINE B4 -6 218 89 9 1497 701 251 232 31 chrX 119577277 119577626 -47072670 - MTD LTR MaLR 0 419 1 9 1497 395 325 80 25 chrX 119577701 119577900 -47072396 + MIR SINE MIR 53 262 0 9 1497 632 306 0 0 chrX 119577938 119578085 -47072211 - B1_Mur1 SINE Alu -1 148 2 9 1497 36 0 0 0 chrX 119578288 119578324 -47071972 + AT_rich Low_complexity Low_complexity 1 36 0 9 1497 341 221 124 9 chrX 119578341 119578446 -47071850 - Lx2B LINE L1 -4 6996 6880 1 1497 435 167 11 11 chrX 119578455 119578546 -47071750 - Lx2B LINE L1 -305 6695 6605 1 1497 399 145 0 49 chrX 119578546 119578669 -47071627 + (TTTA)n Simple_repeat Simple_repeat 2 118 0 1 1497 1075 122 0 0 chrX 119578673 119578821 -47071475 - B1_Mus1 SINE Alu 0 148 1 1 1497 2083 183 86 7 chrX 119578822 119579230 -47071066 - Lx2B LINE L1 -380 6620 6181 1 1497 1741 258 27 46 chrX 119579251 119579986 -47070310 - L1_Mur2 LINE L1 -3418 2459 1739 1 1497 237 132 0 0 chrX 119579986 119580024 -47070272 + (TTA)n Simple_repeat Simple_repeat 3 40 0 1 1497 1799 163 21 15 chrX 119580034 119580370 -47069926 - Lx3B LINE L1 0 6973 6636 1 1497 849 167 25 6 chrX 119580370 119580527 -47069769 - RLTR13D4 LTR ERVK -1 1032 873 1 1497 21820 64 2 1 chrX 119580527 119584055 -47066241 - L1Md_F2 LINE L1 0 6582 3053 1 1497 1573 124 4 0 chrX 119584052 119584294 -47066002 - Lx3B LINE L1 -934 6039 5797 1 1497 8290 142 52 4 chrX 119584294 119585753 -47064543 + Lx3B LINE L1 4296 5824 -62 1 1497 814 206 29 5 chrX 119585745 119585950 -47064346 - L1_Mur2 LINE L1 -4125 1755 1546 1 1497 1060 177 22 35 chrX 119585929 119586157 -47064139 + Lx5 LINE L1 5885 6109 -941 1 1497 386 183 11 89 chrX 119587007 119587097 -47063199 - MTE2a LTR MaLR -24 355 273 1 1497 1338 92 5 0 chrX 119587847 119588032 -47062264 + B2_Mm1t SINE B2 1 186 -7 1 1497 250 383 8 8 chrX 119588382 119588503 -47061793 - ERVL-B4-int LTR ERVL -3602 2112 1992 1 1497 245 136 11 43 chrX 119589090 119589182 -47061114 + T-rich Low_complexity Low_complexity 1 89 0 1 1497 1133 69 14 0 chrX 119589182 119589327 -47060969 - B1_Mm SINE Alu 0 147 1 1 1497 662 251 6 24 chrX 119589398 119589565 -47060731 - Lx5 LINE L1 -138 6912 6749 1 1497 909 145 0 0 chrX 119589566 119589718 -47060578 - L1_Mur2 LINE L1 -1666 4211 4060 1 1497 198 0 0 0 chrX 119589861 119589883 -47060413 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 1 1497 334 246 50 25 chrX 119590100 119590221 -47060075 + MTC-int LTR MaLR 1095 1218 -40 1 1497 1235 253 106 3 chrX 119590246 119590622 -47059674 + MTD LTR MaLR 3 417 -2 1 1497 495 48 0 0 chrX 119590648 119590710 -47059586 + (TC)n Simple_repeat Simple_repeat 2 63 0 1 1497 2272 116 108 0 chrX 119590721 119590996 -47059300 - RLTR47_MM LTR ERV1 -91 441 155 1 1497 336 24 0 0 chrX 119590996 119591037 -47059259 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 1 1497 2272 116 108 0 chrX 119591037 119591159 -47059137 - RLTR47_MM LTR ERV1 -378 154 3 1 1497 564 316 8 12 chrX 119591280 119591520 -47058776 - RLTR6-int LTR ERV1 -92 7686 7448 1 1497 314 387 16 16 chrX 119592064 119592258 -47058038 - MMERGLN-int LTR ERV1 -2006 5550 5357 1 1497 235 273 150 38 chrX 119592513 119592593 -47057703 + RMER15 LTR ERVL 329 417 -158 1 1497 2728 88 3 23 chrX 119592752 119593138 -47057158 - L1_Mus2 LINE L1 -1 6565 6188 1 1497 1457 22 78 0 chrX 119593174 119593192 -47057104 - B2_Mm1a SINE B2 0 193 176 1 1497 207 0 0 0 chrX 119593192 119593215 -47057081 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1 1497 1457 22 78 0 chrX 119593215 119593375 -47056921 - B2_Mm1a SINE B2 -18 175 2 1 1497 488 325 103 23 chrX 119593648 119594045 -47056251 + L1ME1 LINE L1 5727 6155 -24 1 1497 5427 98 24 4 chrX 119594275 119595065 -47055231 + RLTR22_Mus LTR ERVK 1 806 -1002 1 1497 395 307 44 58 chrX 119595338 119595563 -47054733 + RMER12 LTR ERVK 1101 1322 0 1 1497 473 32 16 0 chrX 119595781 119595844 -47054452 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 1497 642 343 29 80 chrX 119596855 119597229 -47053067 + ORR1E LTR MaLR 1 355 -4 1 1497 282 309 0 58 chrX 119597271 119597357 -47052939 - B3 SINE B2 -134 82 2 1 1497 623 46 11 0 chrX 119598079 119598166 -47052130 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 1 1497 283 297 55 0 chrX 119599078 119599169 -47051127 - MIR SINE MIR 0 262 167 1 1497 208 351 67 13 chrX 119599226 119599376 -47050920 + MIRc SINE MIR 3 160 -108 1 1497 629 276 26 31 chrX 119599881 119600072 -47050224 - ORR1D1 LTR MaLR 0 374 185 1 1497 607 208 25 0 chrX 119600058 119600178 -47050118 - B1_Mus2 SINE Alu 0 147 25 1 1497 708 233 97 63 chrX 119600192 119600398 -47049898 - ORR1D1 LTR MaLR -160 214 2 1 1497 230 403 0 0 chrX 119601149 119601226 -47049070 + PB1D10 SINE Alu 13 89 -28 1 1497 253 290 0 0 chrX 119601279 119601348 -47048948 + B3A SINE B2 9 77 -121 1 1497 216 265 108 0 chrX 119602532 119602634 -47047662 + MIR SINE MIR 100 212 -50 1 1497 229 369 36 36 chrX 119602926 119603092 -47047204 + MER5A1 DNA MER1_type 1 166 0 1 1497 189 121 0 0 chrX 119603871 119603904 -47046392 + (TAA)n Simple_repeat Simple_repeat 3 35 0 1 1497 22 35 0 0 chrX 119604124 119604153 -47046143 + AT_rich Low_complexity Low_complexity 1 29 0 1 1497 2537 101 25 20 chrX 119604466 119604872 -47045424 - L1_Mus3 LINE L1 -1 6637 6230 1 1497 277 311 22 11 chrX 119604916 119605007 -47045289 - ID_B1 SINE B4 -33 191 100 1 1497 624 327 10 5 chrX 119605143 119605343 -47044953 - Lx8 LINE L1 -273 7200 7000 1 1497 347 271 35 61 chrX 119605405 119605519 -47044777 - RLTR20A LTR ERVK -2 539 429 1 1497 2306 169 16 28 chrX 119605531 119605968 -47044328 - Lx3C LINE L1 -2 6974 6543 1 1497 3418 117 89 13 chrX 119605968 119606584 -47043712 - L1_Mur1 LINE L1 -491 5395 4733 1 1497 236 91 0 0 chrX 119606620 119606653 -47043643 - L1_Mur1 LINE L1 -1147 4730 4698 1 1497 678 125 17 0 chrX 119606649 119606769 -47043527 - L1_Mur1 LINE L1 -2579 3307 3186 1 1497 8312 38 0 2 chrX 119606784 119607782 -47042514 - L1Md_A LINE L1 0 6582 5587 1 1497 7383 152 102 32 chrX 119607783 119608490 -47041806 - L1_Mur1 LINE L1 -2693 3193 2446 1 1497 594 28 0 0 chrX 119608490 119608562 -47041734 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 1497 7383 152 102 32 chrX 119608562 119609525 -47040771 - L1_Mur1 LINE L1 -3441 2445 1408 1 1497 6580 107 25 30 chrX 119609515 119610531 -47039765 - Lx LINE L1 -6 6648 5639 1 1497 1159 88 38 27 chrX 119610536 119610722 -47039574 - B2_Mm2 SINE B2 -7 188 1 1 1497 3105 206 62 5 chrX 119610729 119611598 -47038698 - L1_Mur1 LINE L1 -2484 1430 210 1 1497 852 194 12 12 chrX 119611619 119611791 -47038505 - RLTR20A LTR ERVK -109 432 261 1 1497 234 214 70 14 chrX 119611964 119612035 -47038261 + RLTR21 LTR ERVK 1498 1572 0 1 1497 612 287 154 12 chrX 119612035 119612275 -47038021 + Lx5 LINE L1 6769 7042 -8 1 1497 409 280 62 85 chrX 119612307 119612697 -47037599 - L1M2 LINE L1 -1944 4199 3819 1 1497 528 349 18 72 chrX 119612824 119613102 -47037194 - ORR1D2 LTR MaLR 0 370 108 1 1497 3146 156 59 28 chrX 119613103 119613717 -47036579 - Lx2 LINE L1 0 6997 6365 1 1497 4313 127 41 10 chrX 119613706 119614396 -47035900 - Lx LINE L1 -9 6645 5935 1 1497 492 210 15 68 chrX 119614396 119614529 -47035767 - Lx2 LINE L1 -628 6369 6244 1 1497 277 310 0 0 chrX 119614533 119614620 -47035676 - ORR1D2 LTR MaLR -283 87 1 1 1497 1319 215 50 3 chrX 119614620 119614919 -47035377 - ORR1D2-int LTR MaLR 0 1370 1058 1 1497 805 300 90 49 chrX 119614949 119615293 -47035003 - ORR1D2 LTR MaLR -12 358 1 1 1497 22 70 0 0 chrX 119615909 119615952 -47034344 + AT_rich Low_complexity Low_complexity 1 43 0 1 1497 27 49 0 0 chrX 119616684 119616725 -47033571 + AT_rich Low_complexity Low_complexity 1 41 0 1 1497 313 315 104 36 chrX 119617076 119617297 -47032999 - L1M4 LINE L1 -1756 4390 4155 1 1497 1012 171 22 13 chrX 119617343 119617568 -47032728 + Lx3A LINE L1 6748 6974 -7 1 1497 29 0 0 0 chrX 119617569 119617598 -47032698 + AT_rich Low_complexity Low_complexity 1 29 0 1 1497 2872 270 58 23 chrX 119617617 119618413 -47031883 - RMER1C Other Other -1 1341 518 1 1497 424 269 100 73 chrX 119620379 119620708 -47029588 - L1MC5 LINE L1 -31 7930 7593 1 1497 318 357 8 0 chrX 119621210 119621339 -47028957 - MLT1D LTR MaLR 0 505 376 1 1497 697 351 32 14 chrX 119621367 119621647 -47028649 - RMER15 LTR ERVL -13 562 278 1 1497 266 263 94 36 chrX 119621656 119621794 -47028502 - RMER15 LTR ERVL -422 153 8 1 1497 355 327 71 13 chrX 119621948 119622103 -47028193 - MLT1D LTR MaLR -307 198 35 1 1497 21 36 0 0 chrX 119622392 119622420 -47027876 + AT_rich Low_complexity Low_complexity 1 28 0 1 1497 1230 148 29 0 chrX 119622747 119622956 -47027340 - RMER19A LTR ERVK 0 737 523 1 1497 21 0 0 0 chrX 119623156 119623177 -47027119 + AT_rich Low_complexity Low_complexity 1 21 0 1 1497 972 274 94 13 chrX 119623197 119623515 -47026781 - Lx6 LINE L1 -269 7191 6848 1 1497 491 288 86 66 chrX 119623494 119623751 -47026545 + Lx6 LINE L1 7181 7442 -18 1 1497 387 0 0 0 chrX 119623751 119623794 -47026502 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 1 1497 231 390 0 9 chrX 119624013 119624119 -47026177 - MIR3 SINE MIR -95 113 9 1 1497 567 43 0 0 chrX 119624862 119624932 -47025364 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 1497 259 269 213 15 chrX 119625404 119625540 -47024756 - L1MC5 LINE L1 -58 7903 7741 1 1497 591 271 61 27 chrX 119626226 119626541 -47023755 - Lx7 LINE L1 -1771 5925 5572 1 1497 1332 338 68 38 chrX 119626528 119627418 -47022878 - Lx8 LINE L1 -919 6554 5638 1 1497 1887 333 49 30 chrX 119627493 119628410 -47021886 + Lx8 LINE L1 6294 7227 -246 1 1497 13843 179 18 26 chrX 119628497 119632193 -47018103 - Lx LINE L1 -6 6648 2985 1 1497 1094 225 28 31 chrX 119632200 119632521 -47017775 + RMER17C LTR ERVK 91 410 0 1 1497 7421 158 2 11 chrX 119632524 119633162 -47017134 - Lx2A1 LINE L1 -1015 5993 5368 1 1497 4846 108 7 1 chrX 119633162 119633886 -47016410 - L1_Mus3 LINE L1 0 6638 5911 1 1497 7421 172 1 29 chrX 119633886 119634786 -47015510 - Lx2A1 LINE L1 -519 5367 4497 1 1497 676 186 52 11 chrX 119634787 119635020 -47015276 - ORR1B1-int LTR MaLR -1124 246 3 1 1497 2039 201 11 16 chrX 119635020 119635158 -47015138 - ORR1B1 LTR MaLR -18 376 243 1 1497 3268 43 8 0 chrX 119635158 119635551 -47014745 + MTA_Mm LTR MaLR 1 396 0 1 1497 2039 201 11 16 chrX 119635551 119635790 -47014506 - ORR1B1 LTR MaLR -152 242 1 1 1497 3371 201 21 30 chrX 119635813 119636510 -47013786 + ORR1B1-int LTR MaLR 819 1509 0 1 1497 1393 195 7 25 chrX 119636510 119636780 -47013516 + ORR1B1 LTR MaLR 1 265 -129 1 1497 3907 113 67 58 chrX 119636780 119637524 -47012772 - RMER17A LTR ERVK 0 751 1 1 1497 474 218 9 38 chrX 119637524 119637608 -47012688 + ORR1B1 LTR MaLR 263 343 -51 1 1497 379 380 53 10 chrX 119637802 119638009 -47012287 - B3 SINE B2 0 216 1 1 1497 367 313 199 39 chrX 119638137 119638544 -47011752 - L1MEf LINE L1 -4508 1892 1421 1 1497 3231 75 31 9 chrX 119638565 119639012 -47011284 - L1Md_F2 LINE L1 -25 6557 6101 1 1497 880 302 111 65 chrX 119639176 119639562 -47010734 - MTD LTR MaLR -15 404 1 1 1497 321 277 95 51 chrX 119639602 119639739 -47010557 - L1MEf LINE L1 -5305 1095 953 1 1497 33259 96 6 9 chrX 119640036 119646169 -47004127 - L1Md_F2 LINE L1 -1 6581 476 1 1497 21 57 0 0 chrX 119646169 119646204 -47004092 + AT_rich Low_complexity Low_complexity 1 35 0 1 1497 278 238 47 47 chrX 119646573 119646679 -47003617 - L1MEf LINE L1 -6231 169 64 1 1497 19501 65 4 1 chrX 119646875 119650124 -47000172 - L1Md_F2 LINE L1 -1 6581 3320 1 1497 1139 286 43 86 chrX 119651155 119651549 -46998747 - ORR1C2 LTR MaLR 0 384 8 1 1497 7297 91 4 0 chrX 119651594 119652713 -46997583 + L1_Mus2 LINE L1 5443 6566 0 1 1497 1812 107 4 4 chrX 119652810 119653074 -46997222 - L1_Mus4 LINE L1 -6 6630 6367 1 1497 1963 159 67 0 chrX 119653075 119653447 -46996849 + L1_Mur2 LINE L1 4203 4599 -1278 2 1497 327 104 0 0 chrX 119653602 119653650 -46996646 + (T)n Simple_repeat Simple_repeat 1 48 0 2 1497 1041 58 0 21 chrX 119653650 119653791 -46996505 - B1_Mus2 SINE Alu 0 147 10 2 1497 396 380 52 49 chrX 119654177 119654465 -46995831 - B4A SINE B4 -2 290 2 2 1497 2061 192 98 65 chrX 119655071 119655622 -46994674 + RMER4B LTR ERVK 17 585 0 2 1497 3878 236 59 14 chrX 119655678 119656260 -46994036 + L1_Mur2 LINE L1 892 1465 -4412 2 1497 363 23 0 0 chrX 119656260 119656304 -46993992 + (TC)n Simple_repeat Simple_repeat 2 45 0 2 1497 432 55 0 0 chrX 119656304 119656358 -46993938 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 1497 3878 208 50 19 chrX 119656358 119656939 -46993357 + L1_Mur2 LINE L1 1466 2061 -3816 2 1497 570 29 0 0 chrX 119656939 119657007 -46993289 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 1497 3878 208 50 19 chrX 119657007 119657165 -46993131 + L1_Mur2 LINE L1 2062 2215 -3662 2 1497 1749 230 65 88 chrX 119657170 119657891 -46992405 - RMER17B LTR ERVK -280 628 1 2 1497 7025 114 22 1 chrX 119657892 119658986 -46991310 - L1_Mur1 LINE L1 -421 5465 4349 2 1497 969 216 19 10 chrX 119659030 119659236 -46991060 + ORR1C1 LTR MaLR 166 373 -5 2 1497 1295 98 16 5 chrX 119659428 119659613 -46990683 + B2_Mm2 SINE B2 1 187 -8 2 1497 296 68 0 0 chrX 119659628 119659672 -46990624 - Lx LINE L1 -1009 5645 5602 2 1497 3815 144 70 2 chrX 119659673 119660318 -46989978 + Lx LINE L1 5959 6647 -7 2 1497 1083 197 27 5 chrX 119660414 119660633 -46989663 - Lx4A LINE L1 -3 7055 6832 2 1497 1788 162 87 82 chrX 119660633 119661036 -46989260 + Lx4A LINE L1 6465 6869 -189 2 1497 432 146 0 0 chrX 119661167 119661270 -46989026 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 2 1497 250 295 0 93 chrX 119661555 119661652 -46988644 + MT2B LTR ERVL 152 239 -362 2 1497 599 300 0 0 chrX 119661573 119661703 -46988593 + B1_Mur3 SINE Alu 6 135 -14 2 1497 8569 52 1 0 chrX 119661926 119663692 -46986604 - L1Md_F2 LINE L1 -12 6570 4803 2 1497 22 35 0 0 chrX 119665231 119665260 -46985036 + AT_rich Low_complexity Low_complexity 1 29 0 2 1497 192 371 31 39 chrX 119667252 119667381 -46982915 - L2c LINE L2 -233 3154 3027 2 1498 180 0 0 0 chrX 119669300 119669320 -46980976 + (CTA)n Simple_repeat Simple_repeat 3 22 0 2 1498 318 26 0 0 chrX 119669320 119669359 -46980937 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2 1498 1535 261 27 27 chrX 119669552 119669926 -46980370 + MTD LTR MaLR 43 416 -3 2 1498 829 279 107 18 chrX 119670008 119670344 -46979952 - ORR1D2 LTR MaLR -4 366 1 2 1498 225 361 0 0 chrX 119670846 119670918 -46979378 - ID4 SINE ID 0 83 12 2 1498 327 280 115 50 chrX 119671081 119671220 -46979076 + MIR SINE MIR 74 221 -41 2 1498 229 182 0 0 chrX 119671264 119671319 -46978977 - MT2A LTR ERVL 0 533 479 2 1498 361 354 35 7 chrX 119671388 119671441 -46978855 - MT2A LTR ERVL -154 379 327 2 1498 4383 152 31 13 chrX 119671441 119672186 -46978110 + Lx2 LINE L1 6238 6995 -2 2 1498 361 354 35 7 chrX 119672186 119672277 -46978019 - MT2A LTR ERVL -207 326 232 2 1498 295 352 144 6 chrX 119672307 119672487 -46977809 - MTEa LTR MaLR -171 208 4 2 1498 448 187 159 24 chrX 119673680 119673806 -46976490 - URR1B DNA MER1_type 0 225 83 2 1498 28453 105 21 10 chrX 119674010 119679308 -46970988 + L1Md_F2 LINE L1 217 5585 -298 2 1498 6878 96 7 3 chrX 119679309 119680282 -46970014 + L1Md_F2 LINE L1 5587 6563 -19 2 1498 563 264 137 6 chrX 119680303 119680486 -46969810 + B3 SINE B2 3 209 -7 2 1498 601 362 24 52 chrX 119680637 119680928 -46969368 + B4A SINE B4 6 288 -4 2 1498 2156 123 3 30 chrX 119681127 119681221 -46969075 - ORR1A2 LTR MaLR 0 327 240 2 1498 4104 174 38 11 chrX 119681221 119682007 -46968289 + RMER17D2 LTR ERVK 1 807 -2 2 1498 2156 123 3 30 chrX 119682007 119682248 -46968048 - ORR1A2 LTR MaLR -88 239 1 2 1498 256 167 54 27 chrX 119682331 119682405 -46967891 + RMER15 LTR ERVL 406 481 -94 2 1498 285 239 0 15 chrX 119682531 119682599 -46967697 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1498 6942 72 20 3 chrX 119682766 119684172 -46966124 - L1Md_F2 LINE L1 0 6582 5152 2 1498 2352 57 57 0 chrX 119684172 119684506 -46965790 - L1Md_F2 LINE L1 -1263 4620 4268 2 1498 4041 48 53 2 chrX 119684506 119685032 -46965264 + L1Md_F3 LINE L1 6030 6582 -2 2 1498 22 35 0 0 chrX 119687076 119687105 -46963191 + AT_rich Low_complexity Low_complexity 1 29 0 2 1498 285 98 0 0 chrX 119687615 119687656 -46962640 + (A)n Simple_repeat Simple_repeat 1 41 0 2 1498 412 268 0 0 chrX 119687965 119688047 -46962249 - Tigger7 DNA MER2_type -14 2477 2396 2 1498 6726 118 11 10 chrX 119688097 119689331 -46960965 - L1_Mus4 LINE L1 0 6636 5411 2 1498 519 345 51 21 chrX 119689334 119689568 -46960728 - Tigger7 DNA MER2_type -2066 425 185 2 1498 345 47 0 0 chrX 119689584 119689627 -46960669 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 1498 260 83 0 0 chrX 119689740 119689776 -46960520 - L1_Mus1 LINE L1 -382 6185 6150 2 1498 8220 132 20 9 chrX 119690113 119692479 -46957817 - L1_Mus1 LINE L1 -2 6974 4535 2 1498 2452 112 0 0 chrX 119692477 119692869 -46957427 + L1_Mus1 LINE L1 4140 4531 -1352 2 1498 1719 179 6 6 chrX 119692867 119693194 -46957102 - Lx3C LINE L1 -328 6648 6322 2 1498 6601 181 26 12 chrX 119693190 119695049 -46955247 + Lx3C LINE L1 4469 6345 -631 2 1498 850 343 44 26 chrX 119695178 119695522 -46954774 + Tigger7 DNA MER2_type 4 353 -2138 2 1498 431 331 22 60 chrX 119695640 119695907 -46954389 + RMER5 LTR ERV1 2 258 -276 2 1498 1444 158 4 0 chrX 119695911 119696158 -46954138 - L1_Mur2 LINE L1 -225 5652 5405 2 1498 4017 213 33 14 chrX 119696170 119697133 -46953163 + Lx2B LINE L1 5880 6860 -140 2 1498 626 275 106 0 chrX 119697410 119697646 -46952650 - RMER5 LTR ERV1 -8 526 266 2 1498 522 0 0 0 chrX 119697646 119697704 -46952592 + (TA)n Simple_repeat Simple_repeat 2 59 0 2 1498 366 75 0 0 chrX 119697720 119697773 -46952523 + Lx3_Mus LINE L1 5813 5865 -1144 2 1498 426 261 92 8 chrX 119697807 119697938 -46952358 + MT2A LTR ERVL 16 157 -376 2 1498 7475 125 30 4 chrX 119697940 119699527 -46950769 - Lx3A LINE L1 -126 6855 5230 2 1498 215 389 50 7 chrX 119699671 119699811 -46950485 + B1F SINE Alu 2 147 -2 2 1498 308 252 77 23 chrX 119699849 119699979 -46950317 - L1MA6 LINE L1 -80 6220 6084 2 1498 216 216 0 19 chrX 119700380 119700432 -46949864 + GA-rich Low_complexity Low_complexity 1 51 0 2 1498 11332 133 2 34 chrX 119700919 119703894 -46946402 + L1VL1 LINE L1 403 3281 -2602 2 1498 21990 107 16 18 chrX 119703885 119707717 -46942579 + L1VL1 LINE L1 398 4209 -1674 2 1498 324 0 0 0 chrX 119707717 119707753 -46942543 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1498 21990 115 18 24 chrX 119707753 119708531 -46941765 + L1VL1 LINE L1 4210 4993 -890 2 1498 2913 135 9 0 chrX 119708531 119708984 -46941312 + L1_Mus1 LINE L1 6109 6565 -2 2 1498 7366 138 16 7 chrX 119708990 119709439 -46940857 + L1VL1 LINE L1 3251 3699 -2184 2 1498 6167 54 4 3 chrX 119709439 119710217 -46940079 + L1Md_F2 LINE L1 5801 6579 -3 2 1498 7366 138 16 7 chrX 119710217 119711112 -46939184 + L1VL1 LINE L1 3700 4605 -1278 2 1498 5502 96 22 8 chrX 119711109 119711953 -46938343 + L1_Mus2 LINE L1 5711 6566 0 2 1498 198 0 0 0 chrX 119712687 119712709 -46937587 + (TAA)n Simple_repeat Simple_repeat 3 24 0 2 1498 205 205 0 0 chrX 119713180 119713219 -46937077 - MIR SINE MIR -34 228 190 2 1498 226 309 143 24 chrX 119713489 119713615 -46936681 - MIRb SINE MIR -9 259 119 2 1498 370 295 29 0 chrX 119714108 119714213 -46936083 + ID_B1 SINE B4 110 217 -7 2 1498 376 289 210 6 chrX 119715791 119715958 -46934338 - MIRb SINE MIR -1 267 67 2 1498 2629 113 41 20 chrX 119716864 119717306 -46932990 + Lx LINE L1 6200 6650 -4 2 1498 207 0 0 0 chrX 119717311 119717334 -46932962 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1498 205 263 0 0 chrX 119721803 119721860 -46928436 + (TCTG)n Simple_repeat Simple_repeat 3 59 0 2 1498 1581 67 19 0 chrX 119722015 119722225 -46928071 - RLTR22_Mus LTR ERVK -1245 563 350 2 1498 1067 224 112 0 chrX 119723221 119723462 -46926834 + RMER19B LTR ERVK 1 268 -634 2 1498 429 20 0 0 chrX 119723463 119723513 -46926783 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1498 4435 206 61 7 chrX 119723520 119724302 -46925994 - Lx2B LINE L1 -20 6980 6175 2 1498 222 37 0 0 chrX 119724302 119724329 -46925967 + (CACCC)n Simple_repeat Simple_repeat 2 28 0 2 1498 4435 206 61 7 chrX 119724329 119724520 -46925776 - Lx2B LINE L1 -826 6174 5956 2 1498 723 120 0 0 chrX 119724517 119724634 -46925662 - Lx3C LINE L1 -1124 5852 5736 2 1498 6510 140 54 92 chrX 119724634 119725177 -46925119 + MurERV4_19-int LTR ERVK 2038 2482 -3298 2 1498 243 0 0 0 chrX 119725177 119725204 -46925092 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 2 1498 6510 140 54 92 chrX 119725204 119726098 -46924198 + MurERV4_19-int LTR ERVK 2483 3421 -2359 2 1498 9716 159 20 48 chrX 119726116 119726766 -46923530 + MurERV4_19-int LTR ERVK 3686 4338 -1442 2 1498 231 36 0 0 chrX 119726766 119726794 -46923502 + (TAA)n Simple_repeat Simple_repeat 3 30 0 2 1498 984 117 0 0 chrX 119726800 119726954 -46923342 + (GAA)n Simple_repeat Simple_repeat 3 156 0 2 1498 9716 157 35 46 chrX 119726954 119728541 -46921755 + MurERV4_19-int LTR ERVK 4351 5778 -2 2 1498 3278 204 135 51 chrX 119728544 119729365 -46920931 + RMER19B LTR ERVK 1 890 -12 2 1498 349 229 52 22 chrX 119729448 119729582 -46920714 - L1M5 LINE L1 -1476 4670 4533 2 1498 194 0 39 0 chrX 119729914 119729940 -46920356 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1498 899 260 105 27 chrX 119730133 119730390 -46919906 - MTC LTR MaLR -35 386 110 2 1498 4609 197 35 10 chrX 119730544 119731430 -46918866 + RMER13B LTR ERVK 1 908 0 2 1498 9892 209 52 25 chrX 119731854 119734723 -46915573 + L1_Mur3 LINE L1 893 3833 -2044 2 1498 2768 178 32 45 chrX 119734721 119735315 -46914981 - L1_Mur2 LINE L1 -1329 4548 3963 2 1498 3366 204 23 19 chrX 119735305 119736205 -46914091 + Lx4B LINE L1 5438 6344 -714 2 1498 5614 206 12 49 chrX 119736198 119737214 -46913082 + L1_Mur3 LINE L1 4109 5130 -747 2 1498 949 132 7 0 chrX 119737214 119737358 -46912938 + B1_Mus2 SINE Alu 3 147 0 2 1498 5614 206 12 49 chrX 119737358 119737698 -46912598 + L1_Mur3 LINE L1 5131 5416 -461 2 1498 280 177 47 31 chrX 119737946 119738010 -46912286 - ID4_ SINE ID 0 83 19 2 1498 27 62 0 0 chrX 119738928 119738976 -46911320 + AT_rich Low_complexity Low_complexity 1 48 0 2 1498 693 226 106 12 chrX 119738976 119739137 -46911159 - Lx4B LINE L1 -18 7040 6865 2 1498 254 289 206 0 chrX 119739144 119739241 -46911055 - Lx4B LINE L1 -387 6671 6555 2 1498 2700 173 12 75 chrX 119739237 119739460 -46910836 - L1_Mur2 LINE L1 -2646 3231 3016 2 1498 932 92 7 0 chrX 119739460 119739601 -46910695 + (TTC)n Simple_repeat Simple_repeat 2 143 0 2 1498 2700 173 12 75 chrX 119739601 119740032 -46910264 - L1_Mur2 LINE L1 -2862 3015 2618 2 1498 2487 92 9 0 chrX 119740034 119740381 -46909915 - L1_Mus1 LINE L1 0 6567 6218 2 1498 7334 118 2 19 chrX 119740381 119742013 -46908283 - L1_Mus3 LINE L1 -3 6635 5019 2 1498 5742 202 42 24 chrX 119742011 119743639 -46906657 - L1_Mur2 LINE L1 -3256 2621 955 2 1498 22 80 0 0 chrX 119746680 119746730 -46903566 + AT_rich Low_complexity Low_complexity 1 50 0 3 1498 810 325 55 23 chrX 119746810 119747119 -46903177 - Lx8 LINE L1 -166 7307 6989 3 1498 396 293 0 0 chrX 119747209 119747308 -46902988 - B1_Mm SINE Alu -48 99 1 3 1498 741 294 59 19 chrX 119747310 119747580 -46902716 - Lx8 LINE L1 -562 6911 6631 3 1498 3157 216 35 11 chrX 119747592 119748298 -46901998 + Lx5 LINE L1 5750 6472 -578 3 1498 938 276 16 12 chrX 119748299 119748552 -46901744 + Lx5 LINE L1 6776 7029 -21 3 1498 411 21 0 0 chrX 119748584 119748632 -46901664 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1498 441 0 0 0 chrX 119748632 119748680 -46901616 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1498 5175 190 11 7 chrX 119748795 119749783 -46900513 + Lx2 LINE L1 5997 6988 -9 3 1498 1482 95 9 22 chrX 119749799 119750024 -46900272 + L1Md_F2 LINE L1 6342 6563 -19 3 1498 3037 211 73 37 chrX 119750076 119750672 -46899624 + L1_Mur2 LINE L1 45 666 -6046 3 1498 356 0 0 22 chrX 119750672 119750717 -46899579 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 1498 3037 215 55 30 chrX 119750717 119750852 -46899444 + L1_Mur2 LINE L1 667 867 -5845 3 1498 388 297 8 71 chrX 119750930 119750954 -46899342 - B1_Mur1 SINE Alu -16 133 115 3 1498 3438 25 2 0 chrX 119750954 119751349 -46898947 - MTA_Mm LTR MaLR 0 396 1 3 1498 9084 36 2 2 chrX 119751349 119752447 -46897849 - MTA_Mm-int LTR MaLR 0 1098 1 3 1498 3352 25 8 0 chrX 119752447 119752840 -46897456 - MTA_Mm LTR MaLR 0 396 1 3 1498 388 297 8 71 chrX 119752840 119752940 -46897356 - B1_Mur1 SINE Alu -35 114 17 3 1498 195 42 0 0 chrX 119752982 119753006 -46897290 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1498 389 321 106 25 chrX 119753009 119753207 -46897089 - B3 SINE B2 0 216 3 3 1498 3583 72 17 2 chrX 119753376 119753848 -46896448 + L1_Mus2 LINE L1 6086 6564 -2 3 1498 317 177 25 0 chrX 119753863 119753942 -46896354 + Lx7 LINE L1 7616 7696 0 3 1498 21 36 0 0 chrX 119753976 119754004 -46896292 + AT_rich Low_complexity Low_complexity 1 28 0 3 1498 11206 140 34 13 chrX 119754004 119756673 -46893623 - L1_Mus3 LINE L1 -2 6636 3922 3 1498 26054 149 18 17 chrX 119756685 119763022 -46887274 - L1_Mus2 LINE L1 -2 6564 229 3 1498 2175 134 101 5 chrX 119763324 119763699 -46886597 + L1_Mus4 LINE L1 6218 6628 -8 3 1498 222 105 0 0 chrX 119764767 119764805 -46885491 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 1498 1293 155 98 14 chrX 119765935 119766210 -46884086 + Lx4B LINE L1 5155 5452 -425 3 1498 2982 82 12 7 chrX 119766200 119766615 -46883681 + L1Md_F2 LINE L1 6145 6561 -21 3 1498 351 0 0 0 chrX 119766619 119766658 -46883638 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 3 1498 6939 187 36 12 chrX 119766667 119768218 -46882078 + Lx4B LINE L1 5453 7057 -1 3 1498 259 399 12 67 chrX 119769983 119770147 -46880149 - MTE2a LTR MaLR -210 169 15 3 1498 1638 62 0 0 chrX 119770148 119770358 -46879938 - L1_Mus1 LINE L1 -430 6137 5928 3 1498 3243 87 0 2 chrX 119770358 119770797 -46879499 + L1_Mus1 LINE L1 6130 6567 0 3 1498 767 303 5 15 chrX 119771431 119771632 -46878664 + B3 SINE B2 18 216 0 3 1498 1022 313 54 34 chrX 119771715 119772066 -46878230 + MTEa LTR MaLR 5 362 -17 3 1498 207 0 0 0 chrX 119772066 119772089 -46878207 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1498 3014 205 30 8 chrX 119772224 119772824 -46877472 + RLTR25B LTR ERVK 3 615 -413 3 1498 1035 66 0 0 chrX 119774302 119774438 -46875858 + (GGGAGA)n Simple_repeat Simple_repeat 3 138 0 3 1498 432 0 0 0 chrX 119774689 119774737 -46875559 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1498 288 0 0 0 chrX 119774817 119774849 -46875447 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 1498 195 42 0 0 chrX 119774931 119774955 -46875341 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 1498 41 36 0 0 chrX 119775184 119775239 -46875057 + AT_rich Low_complexity Low_complexity 1 55 0 3 1498 1263 321 77 24 chrX 119775672 119776266 -46874030 + MER82 DNA MER2_type 18 643 -10 3 1498 465 346 0 0 chrX 119776745 119776878 -46873418 + ID_B1 SINE B4 84 216 -8 3 1498 378 0 0 0 chrX 119777023 119777065 -46873231 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1498 1632 156 50 0 chrX 119777069 119777370 -46872926 - L1_Mur2 LINE L1 -698 5179 4864 3 1498 1816 213 82 16 chrX 119777367 119777820 -46872476 + Lx2B LINE L1 6516 6998 -2 3 1498 214 26 79 0 chrX 119778669 119778707 -46871589 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 3 1498 731 320 101 26 chrX 119778877 119779475 -46870821 - L1MEc LINE L1 -4181 2219 1582 3 1498 324 276 34 25 chrX 119779669 119779788 -46870508 + MLT1B LTR MaLR 269 388 -2 3 1498 1761 213 122 23 chrX 119779938 119780423 -46869873 - RMER16 LTR ERVK 0 533 1 3 1498 272 246 134 58 chrX 119780538 119780814 -46869482 - L1MEc LINE L1 -5377 1023 727 3 1498 620 162 15 7 chrX 119780902 119781039 -46869257 + Lx2 LINE L1 6859 6996 -1 3 1498 24 53 0 0 chrX 119781241 119781279 -46869017 + AT_rich Low_complexity Low_complexity 1 38 0 3 1498 360 353 136 23 chrX 119781327 119781436 -46868860 - L1MEc LINE L1 -5752 648 535 3 1498 3254 33 30 5 chrX 119781436 119781837 -46868459 + RLTR10A LTR ERVK 1 411 0 3 1498 360 353 136 23 chrX 119781837 119781991 -46868305 - L1MEc LINE L1 -5866 534 355 3 1498 325 348 91 35 chrX 119782051 119782283 -46868013 - L1MEc LINE L1 -6131 269 25 3 1498 4469 59 0 0 chrX 119782435 119783015 -46867281 + MTA_Mm-int LTR MaLR 519 1098 0 3 1498 3260 28 8 3 chrX 119783016 119783408 -46866888 + MTA_Mm LTR MaLR 3 396 0 3 1498 400 200 110 11 chrX 119783408 119783430 -46866866 - RMER17A2 LTR ERVK -618 340 319 3 1498 986 53 0 8 chrX 119783430 119783564 -46866732 + (GA)n Simple_repeat Simple_repeat 1 133 0 3 1498 1581 168 0 40 chrX 119783564 119783868 -46866428 - RMER17A2 LTR ERVK -609 297 6 3 1498 4102 146 14 0 chrX 119783891 119784606 -46865690 - L1Md_F LINE L1 -1198 4685 3961 3 1498 303 96 0 0 chrX 119784606 119784658 -46865638 + (T)n Simple_repeat Simple_repeat 1 52 0 3 1498 381 214 62 0 chrX 119784658 119784770 -46865526 - Lx7 LINE L1 -262 7434 7316 3 1498 38062 40 0 3 chrX 119784849 119791076 -46859220 - L1Md_T LINE L1 0 6585 277 3 1498 15668 142 22 2 chrX 119791074 119791823 -46858473 - L1Md_F LINE L1 -1907 3976 3226 3 1498 219 25 75 0 chrX 119791823 119791863 -46858433 + (CAA)n Simple_repeat Simple_repeat 3 45 0 3 1498 15668 160 24 45 chrX 119791863 119794689 -46855607 - L1Md_F LINE L1 -2658 3225 184 3 1498 1057 260 29 51 chrX 119794744 119795060 -46855236 - Lx5 LINE L1 -1 7049 6741 3 1498 21 36 0 0 chrX 119795242 119795270 -46855026 + AT_rich Low_complexity Low_complexity 1 28 0 3 1498 22 56 0 0 chrX 119795617 119795653 -46854643 + AT_rich Low_complexity Low_complexity 1 36 0 3 1498 330 349 7 43 chrX 119796070 119796208 -46854088 - Lx6 LINE L1 -87 7373 7241 3 1498 1865 106 31 22 chrX 119796208 119796527 -46853769 + RLTRETN_Mm LTR ERVK 1 322 0 3 187 18455 153 21 18 chrX 119796527 119803384 -46846912 + ETnERV2-int LTR ERVK 1 7299 -107 3 1499 1841 109 31 22 chrX 119803384 119803703 -46846593 + RLTRETN_Mm LTR ERVK 1 322 0 3 1499 332 287 79 39 chrX 119803707 119803885 -46846411 - Lx6 LINE L1 -218 7242 7058 3 1499 637 303 126 3 chrX 119803853 119804171 -46846125 - Lx5 LINE L1 -595 6865 6458 3 1499 225 0 0 0 chrX 119804192 119804217 -46846079 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1499 3670 207 141 52 chrX 119804219 119804768 -46845528 + L1_Mur2 LINE L1 1412 1929 -3948 3 1499 531 0 0 0 chrX 119804768 119804827 -46845469 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 1499 222 37 0 0 chrX 119804827 119804853 -46845443 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1499 3670 207 141 52 chrX 119804853 119805433 -46844863 + L1_Mur2 LINE L1 1930 2652 -3225 3 1499 324 0 0 0 chrX 119805433 119805469 -46844827 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 1499 3670 207 141 52 chrX 119805469 119805613 -46844683 + L1_Mur2 LINE L1 2653 2799 -3078 3 1499 280 292 61 70 chrX 119805715 119805829 -46844467 - B1F SINE Alu -2 147 35 3 1499 190 211 92 66 chrX 119807162 119807238 -46843058 - L4 LINE RTE -787 1242 1165 3 1499 261 155 0 0 chrX 119807683 119807741 -46842555 + CT-rich Low_complexity Low_complexity 2 59 0 3 1499 242 341 0 76 chrX 119807787 119807879 -46842417 - MER63B DNA AcHobo 0 436 352 3 1499 523 338 58 14 chrX 119808910 119809117 -46841179 - B3 SINE B2 0 216 1 3 1499 5517 78 0 7 chrX 119809450 119810188 -46840108 + L1Md_F2 LINE L1 5837 6569 -13 3 1499 23 68 0 0 chrX 119810897 119810941 -46839355 + AT_rich Low_complexity Low_complexity 1 44 0 3 1499 48 88 0 0 chrX 119810981 119811106 -46839190 + AT_rich Low_complexity Low_complexity 1 125 0 3 1499 191 125 25 0 chrX 119811269 119811309 -46838987 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1499 1849 139 10 16 chrX 119811730 119812044 -46838252 + Lx3A LINE L1 6660 6971 -10 3 1499 299 317 46 46 chrX 119812370 119812608 -46837688 + L1MEc LINE L1 529 766 -5634 3 1499 1618 67 57 7 chrX 119812995 119813261 -46837035 - MTA_Mm LTR MaLR 0 400 133 3 1499 227 286 0 0 chrX 119813217 119813273 -46837023 - B4A SINE B4 -163 129 74 3 1499 6026 174 22 6 chrX 119813318 119814477 -46835819 - L1_Mur2 LINE L1 -1334 4543 3366 3 1499 4784 172 20 60 chrX 119814475 119816167 -46834129 - L1VL2 LINE L1 -1952 1663 22 3 1499 279 0 0 0 chrX 119816883 119816914 -46833382 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 1499 351 0 0 0 chrX 119817005 119817044 -46833252 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1499 1410 170 0 0 chrX 119817886 119818121 -46832175 + L1Md_F2 LINE L1 197 431 -6185 3 1499 32553 73 0 1 chrX 119818117 119822796 -46827500 + L1Md_F2 LINE L1 911 5584 -299 3 1499 8048 46 3 1 chrX 119822798 119823792 -46826504 + L1Md_F2 LINE L1 5587 6582 0 3 1499 556 113 0 76 chrX 119823794 119823899 -46826397 + L1_Mus3 LINE L1 6004 6100 -538 3 1499 261 83 0 0 chrX 119823899 119823935 -46826361 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1499 667 284 94 32 chrX 119824867 119825176 -46825120 - L1_Rod LINE L1 -19 5828 5501 3 1499 1459 360 27 18 chrX 119825257 119825921 -46824375 + Lx8 LINE L1 6188 6857 -616 3 1499 189 74 0 0 chrX 119825921 119825948 -46824348 + (TTA)n Simple_repeat Simple_repeat 2 28 0 3 1499 4047 200 9 136 chrX 119826064 119827332 -46822964 - L1_Mur1 LINE L1 -848 5038 3932 3 1499 7217 195 25 11 chrX 119827347 119829022 -46821274 + Lx2 LINE L1 5270 6978 -19 3 1499 2864 169 9 3 chrX 119829035 119829659 -46820637 + Lx4A LINE L1 5350 5984 -1074 3 1499 3816 111 27 2 chrX 119829834 119830419 -46819877 - L1_Mm LINE L1 -1023 4860 4261 3 1499 3553 80 29 12 chrX 119830421 119830516 -46819780 + L1_Mus1 LINE L1 6068 6175 -392 3 1499 2928 29 6 0 chrX 119830516 119830860 -46819436 - ORR1A0 LTR MaLR 0 346 1 3 1499 3553 80 29 12 chrX 119830860 119831256 -46819040 + L1_Mus1 LINE L1 6176 6567 0 3 1499 5232 175 120 20 chrX 119831521 119832542 -46817754 + Lx4A LINE L1 5933 7055 -3 3 1499 23 86 0 0 chrX 119832565 119832623 -46817673 + AT_rich Low_complexity Low_complexity 1 58 0 3 1499 3304 193 41 25 chrX 119832623 119833304 -46816992 + RLTR17 LTR ERVK 1 692 0 3 1499 218 122 0 24 chrX 119833438 119833480 -46816816 + (TTA)n Simple_repeat Simple_repeat 2 42 0 3 1499 721 204 100 47 chrX 119833828 119833876 -46816420 - RMER17A-int LTR ERVK -1524 204 155 3 1499 279 0 0 0 chrX 119833876 119833907 -46816389 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1499 702 34 0 0 chrX 119833907 119833996 -46816300 + (GA)n Simple_repeat Simple_repeat 2 90 0 3 1499 721 204 100 47 chrX 119833996 119834136 -46816160 - RMER17A-int LTR ERVK -1574 154 8 3 1499 3447 125 33 20 chrX 119834140 119834775 -46815521 - RMER17D2 LTR ERVK 0 809 167 3 1499 382 325 0 17 chrX 119835447 119835563 -46814733 + B4 SINE B4 1 114 -178 4 1499 367 297 11 11 chrX 119835653 119835745 -46814551 + RSINE1 SINE B4 74 165 0 4 1499 226 241 0 0 chrX 119835848 119835906 -46814390 + A-rich Low_complexity Low_complexity 3 60 0 4 1499 340 227 163 10 chrX 119835977 119836034 -46814262 + B3 SINE B2 104 163 -53 4 1499 495 45 0 0 chrX 119836034 119836100 -46814196 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 1499 340 227 163 10 chrX 119836100 119836140 -46814156 + B3 SINE B2 164 215 -1 4 1499 772 262 32 55 chrX 119836498 119836716 -46813580 - B3 SINE B2 -1 215 3 4 1499 731 283 34 37 chrX 119837093 119837390 -46812906 + RodERV21-int LTR ERV1 4491 4786 -205 4 1499 251 281 109 63 chrX 119837390 119837565 -46812731 + RMER4B LTR ERVK 308 490 -95 4 1499 975 223 5 9 chrX 119837895 119838112 -46812184 + Lx4A LINE L1 6843 7058 0 4 1499 35356 36 1 0 chrX 119838180 119844429 -46805867 + L1Md_T LINE L1 1 5589 -297 4 1499 8958 7 0 0 chrX 119844429 119845425 -46804871 + L1Md_T LINE L1 5590 6585 0 4 1499 335 198 58 0 chrX 119845612 119845698 -46804598 + Lx4A LINE L1 6961 7051 -7 4 1499 807 108 71 7 chrX 119846357 119846497 -46803799 + L1Md_F2 LINE L1 6434 6582 0 4 1499 970 196 116 17 chrX 119846830 119847063 -46803233 - RMER16 LTR ERVK 0 533 278 4 1499 274 161 0 125 chrX 119847072 119847136 -46803160 - RMER16 LTR ERVK -477 56 1 4 1499 582 292 101 1 chrX 119847211 119847415 -46802881 - MIRc SINE MIR 0 268 47 4 1499 310 97 97 0 chrX 119847456 119847518 -46802778 - L1Md_F2 LINE L1 -5 6577 6510 4 1499 775 307 59 30 chrX 119847616 119847955 -46802341 + Lx7 LINE L1 7059 7407 -289 4 1499 269 37 35 53 chrX 119848254 119848311 -46801985 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 4 1499 1390 187 8 4 chrX 119848560 119848812 -46801484 - Lx LINE L1 -5 6649 6397 4 1499 303 311 21 47 chrX 119848824 119849016 -46801280 - L1MC LINE L1 -798 5546 5360 4 1499 491 294 48 18 chrX 119849033 119849199 -46801097 - Lx5 LINE L1 -17 7033 6863 4 1499 2527 199 30 17 chrX 119849195 119850049 -46800247 - Lx5 LINE L1 -793 6257 5392 4 1499 421 291 56 74 chrX 119851143 119851358 -46798938 - B3 SINE B2 -5 211 1 4 1499 4231 78 24 2 chrX 119851701 119852276 -46798020 - L1Md_F2 LINE L1 -1 6581 5994 4 1499 1649 220 66 23 chrX 119853417 119853812 -46796484 + MTC LTR MaLR 10 421 0 4 1499 22 0 0 0 chrX 119854537 119854559 -46795737 + AT_rich Low_complexity Low_complexity 1 22 0 4 1499 399 288 47 31 chrX 119855612 119855741 -46794555 - B1F1 SINE Alu 0 149 19 4 1499 182 260 0 14 chrX 119855865 119855939 -46794357 + CT-rich Low_complexity Low_complexity 3 75 0 4 1499 21 0 0 0 chrX 119856756 119856777 -46793519 + AT_rich Low_complexity Low_complexity 1 21 0 4 1499 24 0 0 0 chrX 119857099 119857123 -46793173 + AT_rich Low_complexity Low_complexity 1 24 0 4 1499 401 309 221 0 chrX 119857220 119857369 -46792927 - MTE-int LTR MaLR -402 1178 997 4 1499 419 302 109 18 chrX 119857376 119857541 -46792755 - MTE-int LTR MaLR -1237 343 164 4 1499 1128 332 8 21 chrX 119857984 119858359 -46791937 - MTEa LTR MaLR -2 377 8 4 1499 22 0 0 0 chrX 119858527 119858549 -46791747 + AT_rich Low_complexity Low_complexity 1 22 0 4 1499 21 0 0 0 chrX 119858655 119858676 -46791620 + AT_rich Low_complexity Low_complexity 1 21 0 4 1499 29 47 0 0 chrX 119858939 119858982 -46791314 + AT_rich Low_complexity Low_complexity 1 43 0 4 1499 51 31 0 0 chrX 119859803 119859868 -46790428 + AT_rich Low_complexity Low_complexity 1 65 0 4 1499 224 279 29 0 chrX 119859892 119859960 -46790336 + GA-rich Low_complexity Low_complexity 3 72 0 4 1499 37821 13 3 7 chrX 119860121 119865275 -46785021 + L1Md_A LINE L1 462 5586 -297 4 1499 8781 15 0 0 chrX 119865275 119866270 -46784026 + L1Md_A LINE L1 5587 6581 -1 4 1499 180 0 0 0 chrX 119866296 119866316 -46783980 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1499 3196 132 30 0 chrX 119866521 119867014 -46783282 - Lx LINE L1 -6 6648 6141 4 1499 1576 208 68 63 chrX 119867020 119867446 -46782850 + L1_Mur1 LINE L1 68 495 -6489 4 1499 3114 26 2 85 chrX 119867446 119867871 -46782425 + RLTR10 LTR ERVK 1 390 0 4 1499 16798 22 4 12 chrX 119867881 119869842 -46780454 + RLTR10-int LTR ERVK 41 1984 -3 4 1499 3118 21 2 85 chrX 119869844 119870267 -46780029 + RLTR10 LTR ERVK 1 388 -2 4 1499 500 125 0 0 chrX 119870269 119870341 -46779955 + L1_Mur1 LINE L1 490 561 -6423 4 1499 2290 113 7 2 chrX 119870338 119870901 -46779395 + L1_Mur1 LINE L1 980 1544 -4342 4 1499 7699 41 19 4 chrX 119870897 119872040 -46778256 - L1Md_F2 LINE L1 -1 6581 5413 4 1499 2818 99 4 120 chrX 119872037 119872587 -46777709 + L1_Mur1 LINE L1 1537 2022 -3864 4 1499 423 119 0 0 chrX 119872908 119872975 -46777321 + (TCTA)n Simple_repeat Simple_repeat 1 67 0 4 1499 209 123 60 30 chrX 119873299 119873366 -46776930 + (TTATA)n Simple_repeat Simple_repeat 4 72 0 4 1499 22 56 0 0 chrX 119873371 119873407 -46776889 + AT_rich Low_complexity Low_complexity 1 36 0 4 1499 873 29 0 0 chrX 119873945 119874049 -46776247 + (TC)n Simple_repeat Simple_repeat 2 105 0 4 1499 455 282 78 18 chrX 119874084 119874250 -46776046 + Lx8 LINE L1 6225 6400 -1073 4 1499 832 101 0 0 chrX 119874310 119874429 -46775867 - RMER6C LTR ERVK 0 690 572 4 1499 5179 229 69 14 chrX 119875007 119876321 -46773975 - Lx2B LINE L1 -10 6990 5605 4 1499 3167 161 82 15 chrX 119876770 119877435 -46772861 + RLTR25A LTR ERVK 259 896 -207 4 1499 222 280 0 0 chrX 119877435 119877485 -46772811 + GA-rich Low_complexity Low_complexity 4 53 0 4 1499 523 268 17 84 chrX 119877486 119877665 -46772631 + RLTR25A LTR ERVK 883 1103 0 4 1499 1704 219 38 24 chrX 119877665 119878074 -46772222 - RMER6D LTR ERVK -283 407 1 4 1499 24 0 0 0 chrX 119878330 119878354 -46771942 + AT_rich Low_complexity Low_complexity 1 24 0 4 1499 414 39 0 0 chrX 119878375 119878427 -46771869 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 1499 256 319 66 41 chrX 119878715 119878836 -46771460 + ID_B1 SINE B4 91 214 -10 4 1499 359 132 15 0 chrX 119878959 119879027 -46771269 + (CTA)n Simple_repeat Simple_repeat 3 71 0 4 1499 22 35 0 0 chrX 119879059 119879088 -46771208 + AT_rich Low_complexity Low_complexity 1 29 0 4 1499 472 289 88 33 chrX 119879684 119879871 -46770425 - B3 SINE B2 -10 206 7 4 1499 543 16 0 0 chrX 119880430 119880494 -46769802 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 4 1499 425 284 65 23 chrX 119880515 119880822 -46769474 + L1M2 LINE L1 4768 5081 -796 4 1499 583 308 43 27 chrX 119881452 119881639 -46768657 + B3 SINE B2 27 216 0 4 1499 207 0 0 0 chrX 119882722 119882745 -46767551 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 4 1499 369 174 0 0 chrX 119883481 119883550 -46766746 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 1499 1261 279 67 25 chrX 119884722 119885082 -46765214 - MTD LTR MaLR 0 419 45 4 1499 637 326 26 26 chrX 119885192 119885388 -46764908 - B3A SINE B2 -3 213 18 4 1499 370 295 96 35 chrX 119885430 119885479 -46764817 - B3 SINE B2 -5 211 165 4 1499 258 56 0 0 chrX 119885479 119885515 -46764781 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 1499 370 295 96 35 chrX 119885515 119885662 -46764634 - B3 SINE B2 -52 164 3 4 1499 5841 100 0 7 chrX 119885672 119886623 -46763673 - L1_Mus1 LINE L1 -179 6388 5444 4 1499 2957 185 27 33 chrX 119886612 119887790 -46762506 - L1VL4 LINE L1 -2238 1321 154 4 1499 5008 235 18 24 chrX 119888761 119890611 -46759685 - Lx2B LINE L1 -3 7055 5128 4 1499 4425 179 35 3 chrX 119890610 119891531 -46758765 + Lx2B LINE L1 4193 5142 -735 4 1499 252 279 0 0 chrX 119891533 119891594 -46758702 - MER20 DNA MER1_type -71 148 88 4 1499 234 150 0 0 chrX 119891668 119891708 -46758588 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 1499 405 0 0 0 chrX 119891708 119891753 -46758543 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1499 225 333 62 0 chrX 119891847 119891943 -46758353 - PB1D10 SINE Alu -7 110 9 4 1499 3165 48 8 5 chrX 119892202 119892597 -46757699 - MTA_Mm LTR MaLR 0 396 1 4 1499 8126 67 11 6 chrX 119892597 119893690 -46756606 - MTA_Mm-int LTR MaLR 0 1098 1 4 1499 3091 16 70 5 chrX 119893690 119894062 -46756234 - MTA_Mm LTR MaLR 0 396 1 4 1499 1094 173 18 32 chrX 119895553 119895774 -46754522 - Lx2 LINE L1 -14 6983 6766 4 1499 2915 176 6 6 chrX 119895774 119896283 -46754013 - Lx2 LINE L1 -359 6638 6128 4 1499 8070 105 9 9 chrX 119896285 119897545 -46752751 + MusHAL1 LINE L1 360 1618 -1094 4 1499 2726 64 6 0 chrX 119898211 119898555 -46751741 + ORR1A1 LTR MaLR 1 346 0 4 1499 1213 225 70 78 chrX 119898716 119899073 -46751223 + ORR1B1 LTR MaLR 41 394 0 4 1499 861 316 183 49 chrX 119899628 119900410 -46749886 - L2 LINE L2 -805 2614 1728 4 1499 344 246 0 113 chrX 119902223 119902374 -46747922 - Lx7 LINE L1 -1 7695 7562 4 1499 12069 125 9 14 chrX 119902416 119905249 -46745047 + L1VL4 LINE L1 17 2830 -729 4 1499 1357 52 17 0 chrX 119905250 119905480 -46744816 + (TTTC)n Simple_repeat Simple_repeat 1 233 0 4 1499 516 292 203 26 chrX 119905482 119905753 -46744543 + MTC LTR MaLR 13 331 -90 4 1499 6341 136 7 4 chrX 119905774 119907054 -46743242 + Lx LINE L1 5243 6528 -126 4 1499 4007 140 70 28 chrX 119907054 119907555 -46742741 - RMER17D2 LTR ERVK 0 809 278 4 1499 1899 70 12 0 chrX 119907555 119907814 -46742482 - L1_Mus1 LINE L1 0 6567 6306 4 1499 4007 140 70 28 chrX 119907814 119908089 -46742207 - RMER17D2 LTR ERVK -532 277 1 4 1499 369 171 19 28 chrX 119908094 119908202 -46742094 + Lx LINE L1 6896 6981 -16 4 1499 1527 273 73 9 chrX 119908432 119908897 -46741399 + Lx2B LINE L1 6506 7000 0 4 1499 306 318 0 0 chrX 119909275 119909363 -46740933 + B3 SINE B2 8 95 -121 4 1499 1027 130 19 68 chrX 119909369 119909575 -46740721 + L1_Mus3 LINE L1 6419 6614 -24 4 1499 468 0 0 0 chrX 119909575 119909627 -46740669 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1499 343 323 10 0 chrX 119909628 119909724 -46740572 + B3 SINE B2 105 201 -15 4 1499 238 340 64 0 chrX 119910842 119910936 -46739360 + MIRb SINE MIR 28 127 -141 4 1499 2839 103 5 2 chrX 119911277 119911676 -46738620 - MTB LTR MaLR 0 400 1 4 1499 7225 152 32 19 chrX 119911706 119913133 -46737163 - Lx3B LINE L1 -1005 5968 4525 4 1499 1420 129 6 3 chrX 119913142 119913493 -46736803 + L1_Mur1 LINE L1 1103 1454 -4432 4 1499 214 184 160 20 chrX 119913493 119913543 -46736753 - B2_Mm2 SINE B2 -134 61 5 4 1499 314 218 0 9 chrX 119914270 119914381 -46735915 + CT-rich Low_complexity Low_complexity 1 110 0 4 1499 2378 216 71 127 chrX 119914385 119915380 -46734916 + RMER12B LTR ERVK 6 1171 -233 4 1499 540 30 0 0 chrX 119915380 119915446 -46734850 + (TATG)n Simple_repeat Simple_repeat 3 68 0 4 1499 2378 194 85 126 chrX 119915446 119915485 -46734811 + RMER12B LTR ERVK 1172 1200 -204 4 1499 582 63 0 0 chrX 119915485 119915564 -46734732 + (TC)n Simple_repeat Simple_repeat 2 80 0 4 1499 2378 194 85 126 chrX 119915564 119915678 -46734618 + RMER12B LTR ERVK 1201 1309 -95 4 1499 2596 197 27 10 chrX 119915705 119916222 -46734074 - Lx4A LINE L1 -2 7056 6531 5 1499 234 136 0 0 chrX 119916222 119916266 -46734030 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1499 452 345 0 14 chrX 119917275 119917416 -46732880 + MTD LTR MaLR 75 213 -206 5 1499 372 138 0 0 chrX 119917530 119917595 -46732701 + (TC)n Simple_repeat Simple_repeat 2 66 0 5 1499 4822 235 52 33 chrX 119917858 119919072 -46731224 + L1_Mur2 LINE L1 874 2054 -3826 5 1499 234 0 0 0 chrX 119919072 119919098 -46731198 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 1499 4822 221 47 37 chrX 119919098 119919718 -46730578 + L1_Mur2 LINE L1 2055 2681 -3199 5 1499 277 342 40 27 chrX 119919739 119919889 -46730407 - L2 LINE L2 -579 2840 2689 5 1499 342 340 50 6 chrX 119920117 119920277 -46730019 + MLT1C LTR MaLR 5 171 -296 5 1499 344 348 56 85 chrX 119920460 119920765 -46729531 + MLT1C LTR MaLR 170 465 -2 5 1499 246 316 0 25 chrX 119920774 119920855 -46729441 + MIR SINE MIR 82 160 -102 5 1499 288 0 0 0 chrX 119920860 119920892 -46729404 + (TTA)n Simple_repeat Simple_repeat 3 34 0 5 1499 268 361 0 0 chrX 119921231 119921314 -46728982 + MIR3 SINE MIR 120 202 -6 5 1499 4950 89 4 4 chrX 119922089 119922777 -46727519 - L1_Mus3 LINE L1 -7 6631 5944 5 1499 2306 60 7 0 chrX 119922777 119923077 -46727219 + L1_Mus3 LINE L1 5704 6005 -633 5 1499 846 253 84 48 chrX 119923265 119923659 -46726637 - Lx9 LINE L1 -12 7632 7225 5 1499 550 311 30 15 chrX 119923707 119923841 -46726455 - RSINE1 SINE B4 -29 136 1 5 1499 540 87 21 11 chrX 119924755 119924848 -46725448 + (TC)n Simple_repeat Simple_repeat 1 94 0 5 1499 208 315 13 27 chrX 119924891 119924966 -46725330 + L2a LINE L2 3351 3424 -2 5 1499 21 0 0 0 chrX 119925795 119925816 -46724480 + AT_rich Low_complexity Low_complexity 1 21 0 5 1499 392 302 0 0 chrX 119926145 119926251 -46724045 + ID_B1 SINE B4 99 204 -20 5 1499 399 335 110 43 chrX 119926260 119926560 -46723736 - MLT1B LTR MaLR -57 333 14 5 1499 364 360 62 3 chrX 119926761 119927180 -46723116 - L1ME2 LINE L1 -24 6138 5696 5 1499 338 348 66 9 chrX 119927209 119927421 -46722875 - L1MC1 LINE L1 -32 6301 6078 5 1499 295 306 36 18 chrX 119927481 119927591 -46722705 + B1_Mus1 SINE Alu 11 122 -26 5 1499 3399 74 4 11 chrX 119927654 119928120 -46722176 - L1Md_F2 LINE L1 -1 6581 6119 5 1499 513 292 14 7 chrX 119928523 119928661 -46721635 + ORR1D2 LTR MaLR 1 139 -231 5 1499 674 355 52 36 chrX 119928844 119929209 -46721087 - Tigger7 DNA MER2_type -2116 375 5 5 1499 821 215 0 0 chrX 119929227 119929376 -46720920 - ORR1C1 LTR MaLR -55 323 175 5 1499 25 31 0 0 chrX 119929648 119929680 -46720616 + AT_rich Low_complexity Low_complexity 1 32 0 5 1499 246 62 0 0 chrX 119929750 119929782 -46720514 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 1500 542 41 14 0 chrX 119931181 119931254 -46719042 + (TC)n Simple_repeat Simple_repeat 1 74 0 5 1500 22 35 0 0 chrX 119932528 119932557 -46717739 + AT_rich Low_complexity Low_complexity 1 29 0 5 1500 497 299 0 0 chrX 119932886 119933003 -46717293 + B1_Mur2 SINE Alu 26 142 -7 5 1500 414 302 49 55 chrX 119933099 119933428 -46716868 - Lx9 LINE L1 -76 7568 7242 5 1500 292 374 37 0 chrX 119933616 119933723 -46716573 + PB1D7 SINE Alu 10 120 0 5 1500 374 283 0 70 chrX 119933800 119933914 -46716382 + ID_B1 SINE B4 118 223 -1 5 1500 300 102 0 0 chrX 119933918 119933967 -46716329 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 5 1500 1201 49 0 0 chrX 119934122 119934265 -46716031 + B1_Mus1 SINE Alu 5 147 -1 5 1500 225 0 0 0 chrX 119934281 119934306 -46715990 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 5 1500 1639 157 4 0 chrX 119934742 119934997 -46715299 - ORR1A2 LTR MaLR 0 327 72 5 1500 722 364 44 76 chrX 119935738 119936265 -46714031 - MTE-int LTR MaLR -136 1444 935 5 1500 7988 62 20 7 chrX 119936461 119937784 -46712512 - L1Md_F2 LINE L1 0 7008 5355 5 1500 1060 122 0 0 chrX 119937972 119938120 -46712176 + B1_Mus1 SINE Alu 1 148 0 5 1500 327 49 0 0 chrX 119938120 119938161 -46712135 + (A)n Simple_repeat Simple_repeat 1 41 0 5 1500 21 36 0 0 chrX 119938996 119939024 -46711272 + AT_rich Low_complexity Low_complexity 1 28 0 5 1500 273 29 0 0 chrX 119939455 119939489 -46710807 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1500 207 69 0 0 chrX 119941054 119941083 -46709213 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1500 25 0 0 0 chrX 119942296 119942321 -46707975 + AT_rich Low_complexity Low_complexity 1 25 0 5 1500 234 0 0 26 chrX 119942689 119942728 -46707568 - Lx LINE L1 -8 6646 6609 5 1500 7829 161 14 2 chrX 119942724 119944104 -46706192 - L1_Mm LINE L1 -245 5638 4243 5 1500 603 40 0 0 chrX 119944996 119945070 -46705226 + (CATTC)n Simple_repeat Simple_repeat 5 78 0 5 1500 953 41 8 0 chrX 119945077 119945199 -46705097 + (TCTA)n Simple_repeat Simple_repeat 2 124 0 5 1500 1178 297 64 62 chrX 119945199 119945760 -46704536 - RLTR20D LTR ERVK -1 567 6 5 1500 180 111 0 0 chrX 119945881 119945908 -46704388 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1500 1330 83 22 0 chrX 119945923 119946103 -46704193 - B2_Mm2 SINE B2 -8 187 4 5 1500 28088 113 15 3 chrX 119946157 119949390 -46700906 - L1_Mus1 LINE L1 -14 6553 3304 5 1500 217 0 61 0 chrX 119949390 119949423 -46700873 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 5 1500 28088 128 21 2 chrX 119949423 119951541 -46698755 - L1_Mus1 LINE L1 -2580 3303 1123 5 1500 422 283 41 51 chrX 119951673 119951870 -46698426 + L1MB3 LINE L1 5845 6039 -144 5 1500 1140 243 86 21 chrX 119952204 119952638 -46697658 - L1_Mus1 LINE L1 -5713 903 504 5 1500 2365 308 48 12 chrX 119952705 119953022 -46697274 - RMER1C Other Other -4 1338 996 5 1500 249 33 0 0 chrX 119953022 119953052 -46697244 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 5 1500 2365 312 48 14 chrX 119953052 119953521 -46696775 - RMER1C Other Other -347 995 554 5 1500 811 39 0 0 chrX 119953580 119953682 -46696614 - B1_Mm SINE Alu -13 134 33 5 1500 300 245 38 67 chrX 119953589 119953694 -46696602 - RLTR25B LTR ERVK -507 521 420 5 1500 285 51 0 0 chrX 119954414 119954453 -46695843 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1500 318 255 0 0 chrX 119954851 119954945 -46695351 + CT-rich Low_complexity Low_complexity 2 95 0 5 1500 693 95 0 0 chrX 119955011 119955127 -46695169 + (TG)n Simple_repeat Simple_repeat 1 116 0 5 1500 457 396 96 28 chrX 119955888 119956355 -46693941 - MLT1H LTR MaLR 0 549 51 5 1500 195 344 62 0 chrX 119957035 119957163 -46693133 + L2 LINE L2 2019 2154 -1265 5 1500 29 0 0 0 chrX 119957495 119957524 -46692772 + AT_rich Low_complexity Low_complexity 1 29 0 5 1500 528 77 0 0 chrX 119958127 119958205 -46692091 + (TC)n Simple_repeat Simple_repeat 1 78 0 5 1500 180 0 0 0 chrX 119958221 119958241 -46692055 + (CTA)n Simple_repeat Simple_repeat 1 20 0 5 1500 28 48 0 0 chrX 119958821 119958863 -46691433 + AT_rich Low_complexity Low_complexity 1 42 0 5 1500 237 108 0 0 chrX 119959504 119959541 -46690755 + (ATG)n Simple_repeat Simple_repeat 1 37 0 5 1500 17527 196 46 36 chrX 119960791 119962654 -46687642 - Lx3C LINE L1 -2 6974 5116 5 1500 1050 102 0 0 chrX 119962654 119962801 -46687495 - B1_Mus1 SINE Alu 0 148 2 5 1500 17527 183 66 80 chrX 119962801 119966002 -46684294 - Lx3C LINE L1 -771 5115 1962 5 1500 1093 102 0 0 chrX 119966002 119966149 -46684147 - B1_Mm SINE Alu 0 147 1 5 1500 17527 195 54 56 chrX 119966149 119967205 -46683091 - Lx3C LINE L1 -3925 1961 878 5 1500 325 310 56 14 chrX 119968713 119968857 -46681439 - RMER15 LTR ERVL -20 555 406 5 1500 16815 157 14 94 chrX 119968997 119971422 -46678874 - L1_Mus3 LINE L1 0 6638 4189 5 1500 1014 67 0 0 chrX 119971422 119971557 -46678739 + (TA)n Simple_repeat Simple_repeat 2 136 0 5 1500 16815 194 12 160 chrX 119971557 119972468 -46677828 - L1_Mus3 LINE L1 -1689 4188 3337 5 1500 3488 148 73 22 chrX 119972468 119973164 -46677132 + RMER17D2 LTR ERVK 78 809 0 5 1500 16815 194 12 160 chrX 119973164 119974163 -46676133 - L1_Mus3 LINE L1 -1689 3336 2400 5 1500 2381 109 3 75 chrX 119974163 119974550 -46675746 + RLTR10D LTR ERVK 1 359 0 5 1500 16815 184 12 139 chrX 119974550 119975804 -46674492 - L1_Mus3 LINE L1 -3478 2399 1154 5 1500 414 226 0 0 chrX 119975805 119975911 -46674385 + CT-rich Low_complexity Low_complexity 2 107 0 5 1500 794 40 0 0 chrX 119975915 119976016 -46674280 + L1Md_F2 LINE L1 1047 1147 -5577 5 1500 37684 17 2 7 chrX 119976011 119981222 -46669074 + L1Md_A LINE L1 412 5586 -297 5 1500 8610 22 0 0 chrX 119981222 119982218 -46668078 + L1Md_A LINE L1 5587 6582 0 5 1500 37684 14 1 0 chrX 119982218 119982232 -46668064 + L1Md_A LINE L1 5587 5603 -280 5 1500 35845 36 1 1 chrX 119982219 119986717 -46663579 + L1Md_F2 LINE L1 1105 5585 -298 5 1500 7673 61 2 32 chrX 119986718 119987753 -46662543 + L1Md_F2 LINE L1 5587 6582 0 5 1500 1420 187 22 4 chrX 119987760 119988029 -46662267 + Lx4A LINE L1 5365 5638 -239 5 1500 905 202 131 139 chrX 119988029 119988425 -46661871 + RLTRETN_Mm LTR ERVK 1 393 0 5 1500 1996 165 34 0 chrX 119988425 119988777 -46661519 + Lx4A LINE L1 5639 6002 -1056 5 1500 1405 161 12 31 chrX 119988787 119988913 -46661383 - RLTR22_Mur LTR ERVK -6 1842 1722 5 1500 5492 85 41 114 chrX 119988913 119989886 -46660410 - RLTR13D6 LTR ERVK 0 902 1 5 1500 1405 161 12 31 chrX 119989886 119990016 -46660280 - RLTR22_Mur LTR ERVK -127 1721 1591 5 1500 4886 133 9 15 chrX 119990272 119991081 -46659215 - RLTR22_Mus LTR ERVK -1002 806 3 5 1500 1682 204 3 17 chrX 119991085 119991430 -46658866 + Lx4A LINE L1 6002 6341 -717 5 1500 1873 146 16 3 chrX 119991430 119991746 -46658550 + L1_Mus3 LINE L1 6317 6636 -2 5 1500 3439 199 37 3 chrX 119991776 119992458 -46657838 + Lx4A LINE L1 6350 7054 -4 5 1500 270 447 8 0 chrX 119992491 119992623 -46657673 + RSINE1 SINE B4 3 135 -30 5 1500 387 0 0 0 chrX 119992647 119992690 -46657606 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 5 1500 21 36 0 0 chrX 119992839 119992867 -46657429 + AT_rich Low_complexity Low_complexity 1 28 0 5 1500 468 0 0 0 chrX 119992886 119992938 -46657358 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1500 468 219 27 117 chrX 119993071 119993293 -46657003 - Lx9 LINE L1 -128 7516 7315 5 1500 6270 131 54 9 chrX 119993291 119994501 -46655795 - Lx LINE L1 0 6654 5389 5 1500 6255 99 24 1 chrX 119994488 119995411 -46654885 - L1_Mus3 LINE L1 -2 6636 5693 5 1500 1830 192 5 35 chrX 119995414 119995818 -46654478 + L1_Mur2 LINE L1 4829 5220 -657 5 1500 198 0 0 0 chrX 119995822 119995844 -46654452 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 5 1500 1687 306 14 24 chrX 119995879 119996539 -46653757 - Lx9 LINE L1 -373 7271 6619 5 1500 28 48 0 0 chrX 119996757 119996799 -46653497 + AT_rich Low_complexity Low_complexity 1 42 0 5 1500 1267 304 151 21 chrX 119997007 119997767 -46652529 + Lx6 LINE L1 6575 7433 -27 5 1500 259 304 118 0 chrX 119997831 119997933 -46652363 - MIR SINE MIR -38 224 111 5 1500 189 0 0 0 chrX 119999495 119999516 -46650780 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1500 3160 190 9 57 chrX 120000479 120001215 -46649081 - RMER17B LTR ERVK -266 692 1 1 1500 11223 108 8 8 chrX 120001215 120002931 -46647365 + L1_Mur1 LINE L1 3589 5304 -582 2 1500 555 225 19 66 chrX 120003029 120003286 -46647010 - Lx9 LINE L1 -4 7640 7396 3 1500 25 31 0 0 chrX 120003576 120003608 -46646688 + AT_rich Low_complexity Low_complexity 1 32 0 4 1500 197 108 27 0 chrX 120003734 120003771 -46646525 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 1500 549 204 0 0 chrX 120003801 120003938 -46646358 + (TA)n Simple_repeat Simple_repeat 2 138 0 5 1500 29 28 0 0 chrX 120003986 120004022 -46646274 + AT_rich Low_complexity Low_complexity 1 36 0 6 1500 188 67 0 32 chrX 120004110 120004141 -46646155 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 7 1500 24 0 0 29 chrX 120004398 120004410 -46645886 + AT_rich Low_complexity Low_complexity 1 12 0 8 1500 204 40 0 0 chrX 120004410 120004435 -46645861 + (TG)n Simple_repeat Simple_repeat 2 26 0 9 1500 24 0 0 29 chrX 120004435 120004457 -46645839 + AT_rich Low_complexity Low_complexity 1 22 0 1 1500 440 62 0 90 chrX 120004473 120004562 -46645734 - L1Md_F2 LINE L1 -13 6569 6489 1 1500 279 385 70 47 chrX 120004963 120005304 -46644992 - MLT1A0 LTR MaLR -7 358 10 1 1500 411 73 0 0 chrX 120005489 120005544 -46644752 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 1500 729 276 60 60 chrX 120006235 120006516 -46643780 - B4A SINE B4 -1 291 11 1 1500 897 300 42 15 chrX 120006576 120006840 -46643456 + B4A SINE B4 2 272 -20 1 1500 345 24 0 0 chrX 120006841 120006883 -46643413 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1500 679 243 153 11 chrX 120006885 120007068 -46643228 - B3 SINE B2 -2 214 6 1 1500 298 257 9 27 chrX 120007117 120007229 -46643067 - L1MA6 LINE L1 -61 6239 6130 1 1500 4278 147 6 8 chrX 120007251 120007969 -46642327 - Lx3A LINE L1 -6 6975 6260 1 1500 21 0 0 0 chrX 120008272 120008293 -46642003 + AT_rich Low_complexity Low_complexity 1 21 0 2 1500 402 338 68 39 chrX 120009103 120009309 -46640987 - MTEb LTR MaLR 0 379 168 2 1500 531 138 0 0 chrX 120009309 120009396 -46640900 + (TTCC)n Simple_repeat Simple_repeat 4 90 0 2 1500 330 346 21 43 chrX 120009398 120009585 -46640711 - MTEb LTR MaLR -196 183 1 2 1500 2919 226 101 83 chrX 120009591 120010466 -46639830 + RMER19B LTR ERVK 1 890 -12 2 1500 626 113 8 65 chrX 120010498 120010621 -46639675 + MusHAL1 LINE L1 1324 1439 -1273 2 1500 17697 144 67 8 chrX 120010612 120015235 -46635061 - L1_Mur1 LINE L1 -73 5804 321 2 1500 38153 6 3 2 chrX 120015229 120020612 -46629684 + L1Md_A LINE L1 198 5586 -297 2 1500 9002 3 0 0 chrX 120020612 120021608 -46628688 + L1Md_A LINE L1 5587 6582 0 2 1500 430 59 0 29 chrX 120021608 120021678 -46628618 + L1Md_F3 LINE L1 6506 6573 -11 2 1500 230 0 33 0 chrX 120021687 120021717 -46628579 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1500 994 229 33 8 chrX 120021717 120021959 -46628337 - L1_Mur1 LINE L1 -6706 278 31 2 1500 503 414 50 8 chrX 120021981 120022239 -46628057 + B4A SINE B4 2 270 -22 2 1500 411 21 0 0 chrX 120022272 120022320 -46627976 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1500 465 365 45 0 chrX 120023456 120023678 -46626618 + MLT1D LTR MaLR 243 474 -31 3 1500 262 304 22 0 chrX 120023892 120023984 -46626312 + Lx9 LINE L1 7287 7380 -264 3 1500 31 44 0 0 chrX 120024104 120024149 -46626147 + AT_rich Low_complexity Low_complexity 1 45 0 3 1500 24 0 0 0 chrX 120024486 120024510 -46625786 + AT_rich Low_complexity Low_complexity 1 24 0 3 1500 24 32 0 0 chrX 120025363 120025394 -46624902 + AT_rich Low_complexity Low_complexity 1 31 0 3 1500 4733 159 57 33 chrX 120025399 120026780 -46623516 + L1VL1 LINE L1 29 1449 -2249 3 1500 2056 20 25 0 chrX 120026780 120027025 -46623271 + L1Md_F3 LINE L1 6332 6582 -2 3 1500 2983 113 2 8 chrX 120027025 120027053 -46623243 + L1VL1 LINE L1 1450 1475 -2223 3 1500 18064 142 60 20 chrX 120027050 120031117 -46619179 + L1_Mus3 LINE L1 2396 6630 -8 3 1500 265 322 66 16 chrX 120031134 120031340 -46618956 + MER58B DNA MER1_type 118 332 -9 3 1500 3037 96 5 0 chrX 120031358 120031777 -46618519 - BGLII LTR ERVK 0 421 1 4 1500 285 51 0 0 chrX 120031984 120032023 -46618273 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 4 1500 1081 97 0 0 chrX 120032024 120032169 -46618127 - B1_Mus2 SINE Alu -1 146 2 4 1500 237 282 87 75 chrX 120032174 120032335 -46617961 + L2a LINE L2 3220 3382 -44 4 1500 1226 192 26 23 chrX 120032531 120032835 -46617461 + L1_Mur3 LINE L1 4975 5279 -601 4 1500 4295 199 33 94 chrX 120032854 120034110 -46616186 + L1_Mur2 LINE L1 3679 4858 -1019 4 1500 198 356 11 22 chrX 120034339 120034428 -46615868 + MIRc SINE MIR 19 106 -162 4 1500 555 118 0 0 chrX 120034501 120034586 -46615710 + (TG)n Simple_repeat Simple_repeat 2 86 0 4 1500 2243 55 0 0 chrX 120034948 120035223 -46615073 - L1Md_F2 LINE L1 -639 5943 5669 4 1500 4675 102 0 8 chrX 120035223 120035894 -46614402 + L1Md_F2 LINE L1 5898 6563 -19 4 1500 25 31 0 0 chrX 120035906 120035938 -46614358 + AT_rich Low_complexity Low_complexity 1 32 0 4 1500 1601 261 84 74 chrX 120036231 120036836 -46613460 - RMER19C LTR ERVK 0 611 1 5 1500 720 113 19 51 chrX 120036843 120037001 -46613295 - MurERV4_19-int LTR ERVK -8 5772 5620 5 1500 2260 211 52 2 chrX 120037001 120037466 -46612830 - MurERV4_19-int LTR ERVK -5285 495 8 5 1500 777 212 32 11 chrX 120037473 120037659 -46612637 - RMER19C LTR ERVK 0 611 422 5 1500 379 108 14 0 chrX 120037664 120037738 -46612558 + L1_Mus3 LINE L1 6562 6636 -2 5 1500 7936 100 16 5 chrX 120037738 120038119 -46612177 + MusHAL1 LINE L1 495 882 -1830 5 1500 192 40 0 0 chrX 120038119 120038144 -46612152 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 5 1500 7936 100 16 5 chrX 120038144 120038980 -46611316 + MusHAL1 LINE L1 883 1725 -987 5 1500 345 97 32 0 chrX 120038983 120039045 -46611251 + MusHAL1 LINE L1 2592 2655 -57 5 1500 459 0 0 0 chrX 120039171 120039222 -46611074 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1500 1678 248 51 27 chrX 120039266 120039676 -46610620 - RMER19C LTR ERVK -191 420 1 5 1500 200 354 61 0 chrX 120040140 120040222 -46610074 + L2a LINE L2 3336 3422 -4 5 1500 1414 291 109 14 chrX 120040556 120041051 -46609245 - Lx6 LINE L1 -199 7261 6720 5 1500 900 298 29 13 chrX 120041055 120041368 -46608928 + Lx6 LINE L1 7139 7456 -4 5 1500 27 29 0 0 chrX 120041500 120041534 -46608762 + AT_rich Low_complexity Low_complexity 1 34 0 5 1500 24 0 0 0 chrX 120041711 120041735 -46608561 + AT_rich Low_complexity Low_complexity 1 24 0 5 1500 192 111 0 0 chrX 120042032 120042068 -46608228 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 6 1500 423 83 0 0 chrX 120042219 120042279 -46608017 + (TA)n Simple_repeat Simple_repeat 2 61 0 6 1500 227 313 0 73 chrX 120042280 120042389 -46607907 + Lx9 LINE L1 6849 7047 -597 6 1500 599 286 113 18 chrX 120042429 120042774 -46607522 - MTC LTR MaLR -20 401 8 6 1500 218 333 0 14 chrX 120043234 120043304 -46606992 + PB1D10 SINE Alu 22 90 -27 6 1500 236 200 0 0 chrX 120043326 120043376 -46606920 + A-rich Low_complexity Low_complexity 1 50 0 6 1500 423 176 132 0 chrX 120043938 120044029 -46606267 - MTB_Mm LTR MaLR -304 103 1 6 1500 2469 212 188 23 chrX 120044029 120044780 -46605516 - MTB_Mm-int LTR MaLR 0 1258 384 6 1500 6086 98 23 0 chrX 120044781 120045655 -46604641 - L1_Mus3 LINE L1 -2 6636 5743 6 1500 514 271 0 8 chrX 120045657 120045776 -46604520 - MTB_Mm LTR MaLR -108 299 182 6 1500 34 42 0 0 chrX 120045776 120045824 -46604472 + AT_rich Low_complexity Low_complexity 1 48 0 6 1500 1020 315 37 17 chrX 120045956 120046363 -46603933 - Lx7 LINE L1 -328 7368 6954 7 1500 432 86 0 0 chrX 120046581 120046651 -46603645 + (TC)n Simple_repeat Simple_repeat 1 70 0 7 1500 297 0 0 0 chrX 120046651 120046684 -46603612 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 1500 24 32 0 0 chrX 120049399 120049430 -46600866 + AT_rich Low_complexity Low_complexity 1 31 0 7 1500 320 160 27 0 chrX 120050536 120050611 -46599685 + T-rich Low_complexity Low_complexity 2 78 0 7 1500 1073 102 0 0 chrX 120050624 120050771 -46599525 - B1_Mus1 SINE Alu 0 148 2 7 1500 1116 264 109 36 chrX 120051860 120052448 -46597848 - RLTR40 LTR ERVK -53 764 1 7 1500 252 0 0 0 chrX 120052929 120052957 -46597339 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 7 1500 806 341 11 11 chrX 120052959 120053226 -46597070 + Lx8 LINE L1 7114 7380 -93 7 1500 189 125 54 0 chrX 120053226 120053282 -46597014 + (CAA)n Simple_repeat Simple_repeat 2 60 0 7 1500 296 296 14 14 chrX 120053285 120053429 -46596867 + GA-rich Low_complexity Low_complexity 2 145 0 8 1500 6341 81 2 9 chrX 120053702 120054553 -46595743 - L1_Mus1 LINE L1 -1 6566 5722 8 1500 321 250 28 28 chrX 120054685 120054924 -46595372 + (TA)n Simple_repeat Simple_repeat 1 239 0 8 1500 788 262 169 1 chrX 120055070 120055333 -46594963 - MTD LTR MaLR -14 405 109 8 1500 1838 211 17 29 chrX 120055334 120055745 -46594551 + L1VL1 LINE L1 49 454 -5968 8 1500 30563 130 3 15 chrX 120055771 120057679 -46592617 + L1Md_F2 LINE L1 98 1976 -3907 8 1500 213 65 0 0 chrX 120057679 120057710 -46592586 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 1500 30563 91 3 4 chrX 120057710 120061317 -46588979 + L1Md_F2 LINE L1 1977 5585 -298 8 187 7346 83 4 4 chrX 120061318 120062312 -46587984 + L1Md_F2 LINE L1 5588 6581 -1 8 1501 261 324 0 0 chrX 120062684 120062755 -46587541 - MTD LTR MaLR -299 120 50 8 1501 250 36 52 35 chrX 120063005 120063063 -46587233 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 8 1501 2294 350 37 26 chrX 120063328 120064461 -46585835 - Lx8 LINE L1 -192 7281 6136 8 1501 2759 95 208 0 chrX 120064813 120065236 -46585060 + L1_Mus1 LINE L1 6055 6565 -2 8 1501 22 35 0 0 chrX 120065238 120065267 -46585029 + AT_rich Low_complexity Low_complexity 1 29 0 9 1501 422 75 0 15 chrX 120065883 120065951 -46584345 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 9 1501 1068 89 0 7 chrX 120065951 120066090 -46584206 - B1_Mus1 SINE Alu -8 140 2 9 1501 462 18 0 0 chrX 120067247 120067302 -46582994 + (CA)n Simple_repeat Simple_repeat 1 55 0 9 1501 1241 266 51 3 chrX 120068508 120068863 -46581433 - ORR1D1 LTR MaLR -2 372 1 9 1501 6799 177 22 16 chrX 120068881 120070268 -46580028 - L1_Mur2 LINE L1 -638 5239 3845 9 1501 1811 266 72 16 chrX 120070272 120070852 -46579444 + Lx3C LINE L1 6359 6971 -5 9 1501 31784 108 5 18 chrX 120070882 120072249 -46578047 + L1Md_F2 LINE L1 625 1966 -3917 9 1501 387 0 0 0 chrX 120072249 120072292 -46578004 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 9 1501 31784 72 7 5 chrX 120072292 120075903 -46574393 + L1Md_F2 LINE L1 1967 5585 -298 9 1501 7592 58 9 2 chrX 120075904 120076878 -46573418 + L1Md_F2 LINE L1 5588 6568 -14 9 1501 4918 64 8 8 chrX 120076889 120077539 -46572757 + L1Md_F3 LINE L1 5933 6582 -2 9 1501 265 296 78 39 chrX 120078204 120078306 -46571990 - MIR SINE MIR -113 149 44 1 1501 979 107 0 0 chrX 120078735 120078875 -46571421 + B1_Mus1 SINE Alu 2 141 -7 1 1501 1333 28 0 22 chrX 120078880 120079060 -46571236 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 1 1501 684 0 0 0 chrX 120079260 120079336 -46570960 + (TTTC)n Simple_repeat Simple_repeat 3 78 0 1 1501 21 82 0 0 chrX 120079440 120079489 -46570807 + AT_rich Low_complexity Low_complexity 1 49 0 1 1501 547 250 0 40 chrX 120080165 120080290 -46570006 + B3 SINE B2 1 120 -96 1 1501 352 271 24 0 chrX 120080497 120080582 -46569714 + B3 SINE B2 130 216 0 1 1501 369 109 0 0 chrX 120080729 120080784 -46569512 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1501 3328 98 33 18 chrX 120081148 120081659 -46568637 - MURVY-LTR LTR ERV1 0 519 1 1 1501 3653 137 38 16 chrX 120081920 120082549 -46567747 + Lx LINE L1 6010 6652 -2 1 1501 1495 302 155 58 chrX 120082836 120083717 -46566579 - Lx6 LINE L1 -4 7456 6119 1 1501 2179 245 35 8 chrX 120083741 120084428 -46565868 - Lx6 LINE L1 -1408 6052 5333 1 1501 252 86 0 0 chrX 120084738 120084773 -46565523 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1501 10354 229 89 72 chrX 120084849 120085544 -46564752 - Lx6 LINE L1 -527 5353 4632 1 1501 189 0 0 0 chrX 120085544 120085565 -46564731 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1 1501 10354 229 89 72 chrX 120085565 120086274 -46564022 - Lx6 LINE L1 -1249 4631 3917 1 1501 1292 67 39 0 chrX 120086274 120086453 -46563843 - ORR1A2 LTR MaLR -49 278 93 1 1501 204 67 0 0 chrX 120086455 120086485 -46563811 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 1 1501 1069 45 22 0 chrX 120086485 120086619 -46563677 - B1_Mus2 SINE Alu -8 139 3 1 1501 10354 229 89 72 chrX 120086619 120087291 -46563005 - Lx6 LINE L1 -1966 3914 3230 1 1501 576 121 0 0 chrX 120087291 120087382 -46562914 + (TG)n Simple_repeat Simple_repeat 2 92 0 1 1501 10354 229 89 72 chrX 120087382 120088499 -46561797 - Lx6 LINE L1 -2651 3229 2062 1 1501 626 47 12 0 chrX 120088499 120088585 -46561711 + (TC)n Simple_repeat Simple_repeat 2 88 0 1 1501 189 0 0 0 chrX 120088585 120088605 -46561691 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1501 10354 246 86 55 chrX 120088605 120089579 -46560717 - Lx6 LINE L1 -3819 2061 907 1 1501 8989 231 37 25 chrX 120089611 120092551 -46557745 - Lx7 LINE L1 -1268 6428 3462 1 1501 36954 82 15 12 chrX 120092563 120098892 -46551404 - L1Md_F3 LINE L1 -14 6573 220 1 1501 1534 231 35 2 chrX 120098893 120099344 -46550952 - L1_Mur3 LINE L1 -2404 3476 3011 1 1501 1432 298 63 11 chrX 120099340 120100060 -46550236 - L1_Mur3 LINE L1 -7055 673 17 1 1501 6932 84 28 1 chrX 120100129 120101314 -46548982 - L1_Mus2 LINE L1 0 6566 5347 1 1501 294 95 0 0 chrX 120101557 120101599 -46548697 + (A)n Simple_repeat Simple_repeat 1 42 0 1 1501 27 73 0 0 chrX 120101771 120101826 -46548470 + AT_rich Low_complexity Low_complexity 1 55 0 1 1501 21 82 0 0 chrX 120102206 120102255 -46548041 + AT_rich Low_complexity Low_complexity 1 49 0 1 1501 1856 259 7 7 chrX 120102975 120103388 -46546908 - MTC LTR MaLR -8 413 1 1 1501 3057 52 10 0 chrX 120103714 120104098 -46546198 + RLTR10 LTR ERVK 1 388 -2 1 1501 5250 55 130 115 chrX 120104110 120105048 -46545248 + RLTR10-int LTR ERVK 41 992 -995 1 1501 547 299 79 35 chrX 120105188 120105503 -46544793 + RLTR10-int LTR ERVK 822 1150 -5392 1 1501 8425 37 0 2 chrX 120105585 120106584 -46543712 + RLTR10-int LTR ERVK 990 1986 -1 1 1501 2669 52 47 91 chrX 120106584 120106990 -46543306 + RLTR10 LTR ERVK 1 388 -2 1 1501 1197 226 329 10 chrX 120107545 120108256 -46542040 + L1_Mur2 LINE L1 3007 3944 -1933 1 1501 14811 74 2 25 chrX 120108258 120111081 -46539215 + L1Md_F2 LINE L1 439 3190 -2693 1 1501 2505 55 3 0 chrX 120111070 120111382 -46538914 + L1Md_F2 LINE L1 5264 5576 -307 1 1501 7973 51 0 2 chrX 120111382 120112372 -46537924 + L1Md_F2 LINE L1 5594 6581 -1 1 1501 1202 102 9 93 chrX 120112379 120112595 -46537701 - RLTR13B1 LTR ERVK -695 198 1 1 1501 883 236 0 11 chrX 120112595 120112774 -46537522 + MTC LTR MaLR 237 413 -8 1 1501 326 321 39 47 chrX 120112783 120113015 -46537281 + Lx6 LINE L1 5905 6134 -1326 1 1501 248 289 0 17 chrX 120113015 120113131 -46537165 + Lx6 LINE L1 7332 7445 -15 1 1501 1482 221 21 31 chrX 120113504 120113831 -46536465 + RLTR21 LTR ERVK 1 324 -1248 1 1501 297 0 0 0 chrX 120113848 120113881 -46536415 + (T)n Simple_repeat Simple_repeat 1 33 0 1 1501 2129 197 60 74 chrX 120113890 120114482 -46535814 + RLTR21 LTR ERVK 550 1130 -442 1 1501 423 0 0 0 chrX 120114482 120114529 -46535767 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1501 2129 197 60 74 chrX 120114529 120114600 -46535696 + RLTR21 LTR ERVK 1131 1204 -368 1 1501 621 206 71 29 chrX 120114665 120114835 -46535461 - ORR1B2 LTR MaLR -190 177 1 1 1501 233 268 0 14 chrX 120114870 120114942 -46535354 + GA-rich Low_complexity Low_complexity 1 71 0 1 1501 369 62 0 0 chrX 120114981 120115029 -46535267 + (CATA)n Simple_repeat Simple_repeat 1 48 0 1 1501 651 183 163 12 chrX 120119625 120119791 -46530505 + B2_Mm2 SINE B2 1 191 -4 1 1501 815 167 10 8 chrX 120119791 120119994 -46530302 + GA-rich Low_complexity Low_complexity 1 203 0 1 1501 1271 74 0 6 chrX 120119994 120120171 -46530125 + (GAAA)n Simple_repeat Simple_repeat 2 177 0 1 1501 815 186 0 11 chrX 120120171 120120200 -46530096 + polypurine Low_complexity Low_complexity 148 176 0 1 1501 1254 90 0 0 chrX 120120201 120120379 -46529917 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 1 1501 3020 114 7 5 chrX 120121128 120121577 -46528719 - L1_Mus3 LINE L1 -6 6632 6183 1 1501 268 43 21 21 chrX 120121731 120121778 -46528518 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 1 1501 231 330 9 9 chrX 120127646 120127756 -46522540 + MurSAT1 Satellite Satellite 8 117 -3 1 1501 255 330 44 18 chrX 120128038 120128152 -46522144 + MurSAT1 Satellite Satellite 1 117 -3 1 1501 341 332 14 5 chrX 120128371 120128543 -46521753 + MurSAT1 Satellite Satellite 1 173 -3 1 1501 277 305 10 5 chrX 120128745 120128888 -46521408 + MurSAT1 Satellite Satellite 1 143 -2 1 1501 337 256 15 10 chrX 120129209 120129320 -46520976 + MurSAT1 Satellite Satellite 1 111 -4 1 1501 297 292 10 10 chrX 120130381 120130478 -46519818 + MurSAT1 Satellite Satellite 1 97 -23 1 1501 291 262 35 12 chrX 120131034 120131119 -46519177 + MurSAT1 Satellite Satellite 7 93 -27 1 1501 236 266 31 31 chrX 120133483 120133580 -46516716 + MurSAT1 Satellite Satellite 23 119 -1 1 1501 264 310 11 11 chrX 120133780 120133910 -46516386 + MurSAT1 Satellite Satellite 1 130 -1 1 1501 261 295 18 18 chrX 120133946 120134060 -46516236 + MurSAT1 Satellite Satellite 6 119 -1 1 1501 297 327 10 0 chrX 120134655 120134805 -46515491 + MurSAT1 Satellite Satellite 1 151 -4 1 1501 2805 42 11 142 chrX 120134898 120135347 -46514949 + RLTR10 LTR ERVK 1 390 0 1 1501 7365 44 10 1 chrX 120135357 120136297 -46513999 + RLTR10-int LTR ERVK 41 988 -999 1 1501 8177 28 0 5 chrX 120136376 120137376 -46512920 + RLTR10-int LTR ERVK 990 1984 -3 1 1501 2816 39 11 142 chrX 120137378 120137827 -46512469 + RLTR10 LTR ERVK 1 390 0 1 1501 297 314 16 18 chrX 120138133 120138421 -46511875 + MurSAT1 Satellite Satellite 1 287 -1 1 1501 293 336 0 9 chrX 120138662 120138773 -46511523 + MurSAT1 Satellite Satellite 1 110 -10 1 1501 295 282 6 6 chrX 120139197 120139306 -46510990 + MurSAT1 Satellite Satellite 1 109 0 1 1501 15059 65 0 7 chrX 120139442 120142600 -46507696 + L1Md_Gf LINE L1 86 3319 -2567 1 1501 247 121 15 29 chrX 120144535 120144603 -46505693 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 1 1501 802 175 14 0 chrX 120144650 120144793 -46505503 + B1_Mus1 SINE Alu 4 148 0 1 1501 207 0 0 0 chrX 120144804 120144827 -46505469 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1501 708 12 0 0 chrX 120144838 120144919 -46505377 + (GAAA)n Simple_repeat Simple_repeat 2 82 0 1 1501 219 175 47 16 chrX 120145052 120145116 -46505180 + T-rich Low_complexity Low_complexity 4 69 0 1 1501 770 191 0 0 chrX 120145179 120145326 -46504970 + B1_Mus1 SINE Alu 2 148 0 1 1501 941 150 6 0 chrX 120145326 120145464 -46504832 + polypurine Low_complexity Low_complexity 3 141 0 1 1501 1178 56 0 43 chrX 120145464 120145652 -46504644 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 1 1501 941 150 6 0 chrX 120145652 120145686 -46504610 + polypurine Low_complexity Low_complexity 142 175 0 1 1501 230 106 0 21 chrX 120145787 120145835 -46504461 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 1 1501 784 153 22 0 chrX 120146040 120146177 -46504119 + B1_Mus1 SINE Alu 3 142 -6 1 1501 261 57 0 0 chrX 120146340 120146375 -46503921 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1501 290 107 0 18 chrX 120146457 120146514 -46503782 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 1 1501 975 75 90 0 chrX 120146523 120146657 -46503639 - B1_Mus1 SINE Alu 0 148 3 1 1501 366 23 0 0 chrX 120146669 120146712 -46503584 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1501 222 37 0 0 chrX 120146712 120146738 -46503558 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1501 23 54 0 0 chrX 120146741 120146778 -46503518 + AT_rich Low_complexity Low_complexity 1 37 0 1 1501 832 171 7 0 chrX 120146797 120146943 -46503353 + B1_Mus1 SINE Alu 2 148 0 1 1501 198 0 0 0 chrX 120147061 120147083 -46503213 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1501 323 23 23 0 chrX 120147111 120147155 -46503141 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 1 1501 800 172 0 0 chrX 120147324 120147458 -46502838 + B1_Mus1 SINE Alu 2 135 -13 1 1501 1184 97 4 4 chrX 120147478 120147759 -46502537 + (GAAA)n Simple_repeat Simple_repeat 1 281 0 1 1501 208 24 0 128 chrX 120147794 120147841 -46502455 + T-rich Low_complexity Low_complexity 2 42 0 1 1501 219 36 0 0 chrX 120148042 120148070 -46502226 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1501 1633 26 5 0 chrX 120148093 120148284 -46502012 - B2_Mm1a SINE B2 0 193 2 1 1501 806 171 7 0 chrX 120148335 120148475 -46501821 + B1_Mus1 SINE Alu 2 142 -6 1 1501 183 42 0 0 chrX 120148670 120148694 -46501602 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 1501 282 73 0 0 chrX 120148769 120148810 -46501486 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1501 23 0 0 0 chrX 120148817 120148840 -46501456 + AT_rich Low_complexity Low_complexity 1 23 0 1 1501 877 157 7 0 chrX 120148874 120149014 -46501282 + B1_Mus1 SINE Alu 2 142 -6 1 1501 252 136 0 0 chrX 120149017 120149050 -46501246 + (A)n Simple_repeat Simple_repeat 1 33 0 1 1501 927 144 0 0 chrX 120149050 120149217 -46501079 + (GGAA)n Simple_repeat Simple_repeat 3 169 0 1 1501 252 136 0 0 chrX 120149217 120149227 -46501069 + (A)n Simple_repeat Simple_repeat 1 10 0 1 1501 931 108 14 0 chrX 120149550 120149689 -46500607 + B1_Mus1 SINE Alu 2 142 -6 1 1501 380 143 14 0 chrX 120149693 120149763 -46500533 + GA-rich Low_complexity Low_complexity 2 72 0 1 1501 270 138 0 0 chrX 120149893 120149951 -46500345 + (TTTTTG)n Simple_repeat Simple_repeat 3 60 0 1 1501 885 129 14 0 chrX 120150112 120150251 -46500045 + B1_Mus1 SINE Alu 2 142 -6 1 1501 314 169 0 15 chrX 120150255 120150321 -46499975 + GA-rich Low_complexity Low_complexity 2 66 0 1 1501 366 61 0 0 chrX 120150452 120150501 -46499795 + (T)n Simple_repeat Simple_repeat 1 49 0 1 1501 817 164 7 0 chrX 120150678 120150824 -46499472 + B1_Mus1 SINE Alu 2 148 0 2 1501 214 219 12 24 chrX 120150828 120150912 -46499384 + (CAAA)n Simple_repeat Simple_repeat 2 84 0 2 1501 279 0 0 0 chrX 120150946 120150977 -46499319 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1501 216 0 0 0 chrX 120151035 120151059 -46499237 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1501 27 29 0 0 chrX 120151154 120151188 -46499108 + AT_rich Low_complexity Low_complexity 1 34 0 2 1501 212 0 36 0 chrX 120151200 120151228 -46499068 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2 1501 798 164 0 7 chrX 120151290 120151431 -46498865 + B1_Mus1 SINE Alu 3 142 -6 2 1501 330 26 0 0 chrX 120151702 120151741 -46498555 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1501 186 128 0 0 chrX 120151748 120151787 -46498509 + (T)n Simple_repeat Simple_repeat 1 39 0 2 1501 609 196 26 53 chrX 120151826 120151977 -46498319 + B1_Mus1 SINE Alu 2 148 0 2 1501 713 91 0 18 chrX 120151977 120152089 -46498207 + (GAAAA)n Simple_repeat Simple_repeat 4 113 0 2 1501 972 122 0 13 chrX 120152368 120152517 -46497779 + B1_Mus1 SINE Alu 2 148 0 2 1501 210 158 0 0 chrX 120152517 120152555 -46497741 + A-rich Low_complexity Low_complexity 1 38 0 2 1501 24 53 0 0 chrX 120152583 120152621 -46497675 + AT_rich Low_complexity Low_complexity 1 38 0 2 1501 219 212 0 70 chrX 120152737 120152763 -46497533 + T-rich Low_complexity Low_complexity 60 80 0 2 1501 279 0 0 0 chrX 120152763 120152794 -46497502 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2 1501 219 212 0 70 chrX 120152794 120152853 -46497443 + T-rich Low_complexity Low_complexity 1 59 0 2 1501 931 117 13 27 chrX 120152875 120153024 -46497272 + B1_Mus1 SINE Alu 2 148 0 2 1501 502 85 11 11 chrX 120153226 120153321 -46496975 + (TTTTG)n Simple_repeat Simple_repeat 1 95 0 2 1501 1123 97 0 0 chrX 120153357 120153502 -46496794 - B1_Mus2 SINE Alu 0 147 3 2 1501 240 122 0 0 chrX 120153508 120153549 -46496747 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1501 27 29 0 0 chrX 120153554 120153588 -46496708 + AT_rich Low_complexity Low_complexity 1 34 0 2 1501 759 180 7 14 chrX 120153610 120153744 -46496552 + B1_Mus1 SINE Alu 2 136 -12 2 1501 378 42 0 0 chrX 120153744 120153792 -46496504 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 2 1501 204 67 0 0 chrX 120153935 120153965 -46496331 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2 1501 822 164 0 7 chrX 120154134 120154269 -46496027 + B1_Mus1 SINE Alu 2 135 -13 2 1501 1123 74 12 0 chrX 120154294 120154457 -46495839 + (GAAA)n Simple_repeat Simple_repeat 2 166 0 2 1501 210 37 0 0 chrX 120154491 120154518 -46495778 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1501 203 171 0 0 chrX 120154524 120154565 -46495731 + T-rich Low_complexity Low_complexity 1 41 0 2 1501 378 0 0 0 chrX 120154746 120154788 -46495508 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1501 22 0 0 0 chrX 120154798 120154820 -46495476 + AT_rich Low_complexity Low_complexity 1 22 0 2 1501 908 129 7 0 chrX 120154854 120154994 -46495302 + B1_Mus1 SINE Alu 2 142 -6 2 1501 180 0 0 0 chrX 120155128 120155148 -46495148 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1501 198 0 0 0 chrX 120155266 120155288 -46495008 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 2 1501 626 58 0 11 chrX 120155288 120155376 -46494920 + (TG)n Simple_repeat Simple_repeat 2 88 0 2 1501 23 0 0 0 chrX 120155383 120155406 -46494890 + AT_rich Low_complexity Low_complexity 1 23 0 2 1501 947 129 7 0 chrX 120155440 120155580 -46494716 + B1_Mus1 SINE Alu 2 142 -6 2 1501 802 165 0 18 chrX 120155584 120155751 -46494545 + GA-rich Low_complexity Low_complexity 2 165 0 2 1501 894 122 14 0 chrX 120156071 120156210 -46494086 + B1_Mus1 SINE Alu 2 142 -6 2 1501 266 125 21 0 chrX 120156214 120156262 -46494034 + (GAAA)n Simple_repeat Simple_repeat 2 50 0 2 1501 447 52 0 0 chrX 120156393 120156451 -46493845 + (T)n Simple_repeat Simple_repeat 1 58 0 2 1501 815 151 7 0 chrX 120156623 120156762 -46493534 + B1_Mus1 SINE Alu 2 141 -7 2 1501 201 246 0 14 chrX 120156767 120156841 -46493455 + A-rich Low_complexity Low_complexity 2 74 0 2 1501 189 0 0 0 chrX 120156873 120156894 -46493402 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1501 360 0 0 0 chrX 120156951 120156991 -46493305 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 2 1501 27 29 0 0 chrX 120157086 120157120 -46493176 + AT_rich Low_complexity Low_complexity 1 34 0 2 1501 212 0 36 0 chrX 120157132 120157160 -46493136 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2 1501 743 171 0 35 chrX 120157222 120157367 -46492929 + B1_Mus1 SINE Alu 3 142 -6 2 1501 387 0 0 0 chrX 120157635 120157678 -46492618 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1501 258 56 0 0 chrX 120157685 120157721 -46492575 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1501 641 189 26 53 chrX 120157760 120157911 -46492385 + B1_Mus1 SINE Alu 2 148 0 2 1501 570 67 0 0 chrX 120157931 120158006 -46492290 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 2 1501 369 0 0 0 chrX 120158205 120158246 -46492050 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1501 958 129 0 13 chrX 120158305 120158454 -46491842 + B1_Mus1 SINE Alu 2 148 0 2 1501 225 119 0 0 chrX 120158454 120158496 -46491800 + (A)n Simple_repeat Simple_repeat 1 42 0 2 1501 207 0 0 0 chrX 120158708 120158731 -46491565 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2 1501 854 160 21 0 chrX 120158804 120158948 -46491348 + B1_Mus1 SINE Alu 2 148 0 2 1501 435 141 0 0 chrX 120158948 120159040 -46491256 + (A)n Simple_repeat Simple_repeat 1 92 0 2 1501 204 67 0 0 chrX 120159177 120159207 -46491089 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2 1501 730 187 0 36 chrX 120159370 120159509 -46490787 + B1_Mus1 SINE Alu 2 135 -13 2 1501 755 21 11 0 chrX 120159535 120159628 -46490668 + (GAAA)n Simple_repeat Simple_repeat 2 95 0 2 1501 302 231 118 53 chrX 120159633 120159802 -46490494 - L1MDa LINE L1 -4102 2531 2352 2 1501 219 212 35 23 chrX 120159873 120159913 -46490383 + T-rich Low_complexity Low_complexity 47 89 0 2 1501 537 16 0 0 chrX 120159913 120159975 -46490321 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 1501 219 212 35 23 chrX 120159975 120160021 -46490275 + T-rich Low_complexity Low_complexity 3 46 0 2 1501 886 143 7 0 chrX 120160043 120160183 -46490113 + B1_Mus1 SINE Alu 2 142 -6 2 1501 219 36 0 0 chrX 120160316 120160344 -46489952 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1501 452 48 0 16 chrX 120160475 120160539 -46489757 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1501 30 27 0 0 chrX 120160546 120160583 -46489713 + AT_rich Low_complexity Low_complexity 1 37 0 2 1501 914 143 7 0 chrX 120160605 120160745 -46489551 + B1_Mus1 SINE Alu 2 142 -6 2 1501 768 166 0 0 chrX 120160749 120160888 -46489408 + GA-rich Low_complexity Low_complexity 2 140 0 2 1501 195 42 0 0 chrX 120161131 120161155 -46489141 + (TTG)n Simple_repeat Simple_repeat 1 24 0 2 1501 908 122 14 0 chrX 120161213 120161352 -46488944 + B1_Mus1 SINE Alu 2 142 -6 2 1501 294 164 0 0 chrX 120161356 120161411 -46488885 + GA-rich Low_complexity Low_complexity 2 56 0 2 1501 180 0 0 0 chrX 120161557 120161577 -46488719 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2 1501 714 187 0 43 chrX 120161740 120161880 -46488416 + B1_Mus1 SINE Alu 2 135 -13 2 1501 596 14 14 0 chrX 120161906 120161979 -46488317 + (GAAA)n Simple_repeat Simple_repeat 2 75 0 2 1501 248 198 0 69 chrX 120162010 120162097 -46488199 + T-rich Low_complexity Low_complexity 6 86 0 2 1501 339 25 0 0 chrX 120162262 120162302 -46487994 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1501 228 35 0 0 chrX 120162312 120162341 -46487955 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1501 842 144 14 0 chrX 120162377 120162516 -46487780 + B1_Mus1 SINE Alu 2 142 -6 2 1501 209 237 3 70 chrX 120162649 120162798 -46487498 + T-rich Low_complexity Low_complexity 1 139 0 2 1501 452 48 0 16 chrX 120162798 120162862 -46487434 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1501 205 227 5 104 chrX 120162862 120162905 -46487391 + T-rich Low_complexity Low_complexity 3 44 0 2 1501 871 157 7 0 chrX 120162927 120163067 -46487229 + B1_Mus1 SINE Alu 2 142 -6 2 1501 225 0 0 0 chrX 120163070 120163095 -46487201 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1501 666 95 0 0 chrX 120163095 120163190 -46487106 + (GGAA)n Simple_repeat Simple_repeat 3 97 0 2 1501 222 37 0 0 chrX 120163438 120163465 -46486831 + (TTG)n Simple_repeat Simple_repeat 1 27 0 2 1501 905 122 14 0 chrX 120163523 120163662 -46486634 + B1_Mus1 SINE Alu 2 142 -6 2 1501 233 167 19 0 chrX 120163666 120163720 -46486576 + GA-rich Low_complexity Low_complexity 2 56 0 2 1501 180 0 0 0 chrX 120163866 120163886 -46486410 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2 1501 702 194 0 43 chrX 120164050 120164190 -46486106 + B1_Mus1 SINE Alu 2 135 -13 2 1501 1220 13 25 0 chrX 120164214 120164372 -46485924 + (GAAA)n Simple_repeat Simple_repeat 2 163 0 2 1501 257 222 0 0 chrX 120164405 120164477 -46485819 + T-rich Low_complexity Low_complexity 1 72 0 2 1501 255 181 0 78 chrX 120164616 120164657 -46485639 + T-rich Low_complexity Low_complexity 44 83 0 2 1501 303 71 0 0 chrX 120164657 120164699 -46485597 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1501 255 181 0 78 chrX 120164699 120164747 -46485549 + T-rich Low_complexity Low_complexity 1 43 0 2 1501 886 143 7 0 chrX 120164768 120164908 -46485388 + B1_Mus1 SINE Alu 2 142 -6 2 1501 234 0 0 0 chrX 120165042 120165068 -46485228 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1501 476 81 14 0 chrX 120165199 120165273 -46485023 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 1501 24 0 0 0 chrX 120165280 120165304 -46484992 + AT_rich Low_complexity Low_complexity 1 24 0 3 1501 927 136 7 0 chrX 120165338 120165478 -46484818 + B1_Mus1 SINE Alu 2 142 -6 3 1501 468 191 0 0 chrX 120165481 120165575 -46484721 + GA-rich Low_complexity Low_complexity 3 96 0 3 1501 222 37 0 0 chrX 120165819 120165846 -46484450 + (TTG)n Simple_repeat Simple_repeat 1 27 0 3 1501 908 122 14 0 chrX 120165904 120166043 -46484253 + B1_Mus1 SINE Alu 2 142 -6 3 1501 266 148 19 0 chrX 120166046 120166100 -46484196 + GA-rich Low_complexity Low_complexity 2 56 0 3 1501 204 67 0 0 chrX 120166236 120166266 -46484030 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1501 720 187 0 36 chrX 120166429 120166568 -46483728 + B1_Mus1 SINE Alu 2 135 -13 3 1501 994 16 16 0 chrX 120166594 120166718 -46483578 + (GAAA)n Simple_repeat Simple_repeat 2 127 0 3 1501 228 35 0 0 chrX 120166749 120166778 -46483518 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 1501 244 188 35 23 chrX 120166962 120167003 -46483293 + T-rich Low_complexity Low_complexity 47 89 0 3 1501 537 16 0 0 chrX 120167003 120167065 -46483231 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 1501 244 188 35 23 chrX 120167065 120167110 -46483186 + T-rich Low_complexity Low_complexity 3 46 0 3 1501 878 143 7 0 chrX 120167132 120167272 -46483024 + B1_Mus1 SINE Alu 2 142 -6 3 1501 198 0 0 0 chrX 120167406 120167428 -46482868 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1501 506 43 0 14 chrX 120167559 120167629 -46482667 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 1501 24 0 0 0 chrX 120167636 120167660 -46482636 + AT_rich Low_complexity Low_complexity 1 24 0 3 1501 908 143 7 0 chrX 120167694 120167834 -46482462 + B1_Mus1 SINE Alu 2 142 -6 3 1501 546 108 0 0 chrX 120167860 120167943 -46482353 + (GGAA)n Simple_repeat Simple_repeat 3 85 0 3 1501 222 37 0 0 chrX 120168195 120168222 -46482074 + (TTG)n Simple_repeat Simple_repeat 1 27 0 3 1501 899 122 14 0 chrX 120168280 120168419 -46481877 + B1_Mus1 SINE Alu 2 142 -6 3 1501 266 148 19 0 chrX 120168422 120168476 -46481820 + GA-rich Low_complexity Low_complexity 2 56 0 3 1501 204 67 0 0 chrX 120168612 120168642 -46481654 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1501 695 203 0 55 chrX 120168805 120168951 -46481345 + B1_Mus1 SINE Alu 2 139 -9 3 1501 1328 12 24 0 chrX 120168973 120169143 -46481153 + (GAAA)n Simple_repeat Simple_repeat 2 175 0 3 1501 239 229 0 0 chrX 120169176 120169246 -46481050 + T-rich Low_complexity Low_complexity 1 70 0 3 1501 357 24 0 0 chrX 120169425 120169467 -46480829 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1501 234 0 0 0 chrX 120169477 120169503 -46480793 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1501 859 150 7 0 chrX 120169539 120169679 -46480617 + B1_Mus1 SINE Alu 2 142 -6 3 1501 189 0 0 0 chrX 120169814 120169835 -46480461 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1501 434 49 0 16 chrX 120169966 120170028 -46480268 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 1501 24 0 0 0 chrX 120170035 120170059 -46480237 + AT_rich Low_complexity Low_complexity 1 24 0 3 1501 895 150 7 0 chrX 120170093 120170233 -46480063 + B1_Mus1 SINE Alu 2 142 -6 3 1501 471 202 0 0 chrX 120170237 120170336 -46479960 + GA-rich Low_complexity Low_complexity 2 100 0 3 1501 195 42 0 0 chrX 120170577 120170601 -46479695 + (TTG)n Simple_repeat Simple_repeat 1 24 0 3 1501 887 129 14 0 chrX 120170659 120170798 -46479498 + B1_Mus1 SINE Alu 2 142 -6 3 1501 266 148 19 0 chrX 120170801 120170855 -46479441 + GA-rich Low_complexity Low_complexity 2 56 0 3 1501 180 0 0 0 chrX 120171001 120171021 -46479275 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 3 1501 694 194 0 43 chrX 120171184 120171324 -46478972 + B1_Mus1 SINE Alu 2 135 -13 3 1501 1249 43 12 0 chrX 120171348 120171512 -46478784 + (GAAA)n Simple_repeat Simple_repeat 2 167 0 3 1501 228 35 0 0 chrX 120171543 120171572 -46478724 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 1501 244 188 35 23 chrX 120171755 120171796 -46478500 + T-rich Low_complexity Low_complexity 47 89 0 3 1501 537 16 0 0 chrX 120171796 120171858 -46478438 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 1501 244 188 35 23 chrX 120171858 120171903 -46478393 + T-rich Low_complexity Low_complexity 3 46 0 3 1501 878 143 7 0 chrX 120171925 120172065 -46478231 + B1_Mus1 SINE Alu 2 142 -6 3 1501 207 0 0 0 chrX 120172199 120172222 -46478074 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1501 524 42 0 14 chrX 120172353 120172425 -46477871 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 1501 24 0 0 0 chrX 120172432 120172456 -46477840 + AT_rich Low_complexity Low_complexity 1 24 0 3 1501 908 143 7 0 chrX 120172490 120172630 -46477666 + B1_Mus1 SINE Alu 2 142 -6 3 1501 200 42 0 0 chrX 120172633 120172657 -46477639 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1501 546 108 0 0 chrX 120172657 120172740 -46477556 + (GGAA)n Simple_repeat Simple_repeat 3 85 0 3 1501 222 37 0 0 chrX 120172991 120173018 -46477278 + (TTG)n Simple_repeat Simple_repeat 1 27 0 3 1501 899 122 14 0 chrX 120173076 120173215 -46477081 + B1_Mus1 SINE Alu 2 142 -6 3 1501 266 148 19 0 chrX 120173218 120173272 -46477024 + GA-rich Low_complexity Low_complexity 2 56 0 3 1501 204 67 0 0 chrX 120173408 120173438 -46476858 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1501 683 203 0 68 chrX 120173601 120173749 -46476547 + B1_Mus1 SINE Alu 2 139 -9 3 1501 1394 6 23 0 chrX 120173771 120173946 -46476350 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 3 1501 239 229 0 0 chrX 120173986 120174056 -46476240 + T-rich Low_complexity Low_complexity 1 70 0 3 1501 224 188 34 45 chrX 120174195 120174235 -46476061 + T-rich Low_complexity Low_complexity 47 89 0 3 1501 357 24 0 0 chrX 120174235 120174277 -46476019 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1501 224 188 34 45 chrX 120174277 120174325 -46475971 + T-rich Low_complexity Low_complexity 3 46 0 3 1501 859 150 7 0 chrX 120174347 120174487 -46475809 + B1_Mus1 SINE Alu 2 142 -6 3 1501 252 0 0 0 chrX 120174621 120174649 -46475647 + (T)n Simple_repeat Simple_repeat 1 28 0 3 1501 476 81 14 0 chrX 120174780 120174854 -46475442 + (TG)n Simple_repeat Simple_repeat 2 76 0 3 1501 24 0 0 0 chrX 120174861 120174885 -46475411 + AT_rich Low_complexity Low_complexity 1 24 0 3 1501 920 136 7 0 chrX 120174919 120175059 -46475237 + B1_Mus1 SINE Alu 2 142 -6 3 1501 468 191 0 0 chrX 120175062 120175156 -46475140 + GA-rich Low_complexity Low_complexity 3 96 0 3 1501 222 37 0 0 chrX 120175400 120175427 -46474869 + (TTG)n Simple_repeat Simple_repeat 1 27 0 3 1501 899 122 14 0 chrX 120175485 120175624 -46474672 + B1_Mus1 SINE Alu 2 142 -6 3 1501 266 148 19 0 chrX 120175627 120175681 -46474615 + GA-rich Low_complexity Low_complexity 2 56 0 3 1501 204 67 0 0 chrX 120175817 120175847 -46474449 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1501 712 187 0 36 chrX 120176010 120176149 -46474147 + B1_Mus1 SINE Alu 2 135 -13 3 1501 994 16 16 0 chrX 120176175 120176299 -46473997 + (GAAA)n Simple_repeat Simple_repeat 2 127 0 3 1501 228 35 0 0 chrX 120176330 120176359 -46473937 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 1501 244 188 35 23 chrX 120176543 120176584 -46473712 + T-rich Low_complexity Low_complexity 47 89 0 3 1501 537 16 0 0 chrX 120176584 120176646 -46473650 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 1501 244 188 35 23 chrX 120176646 120176691 -46473605 + T-rich Low_complexity Low_complexity 3 46 0 3 1501 878 143 7 0 chrX 120176713 120176853 -46473443 + B1_Mus1 SINE Alu 2 142 -6 3 1501 198 0 0 0 chrX 120176987 120177009 -46473287 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1501 506 43 0 14 chrX 120177140 120177210 -46473086 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 1501 24 0 0 0 chrX 120177217 120177241 -46473055 + AT_rich Low_complexity Low_complexity 1 24 0 3 1501 908 143 7 0 chrX 120177275 120177415 -46472881 + B1_Mus1 SINE Alu 2 142 -6 3 1501 546 108 0 0 chrX 120177441 120177524 -46472772 + (GGAA)n Simple_repeat Simple_repeat 3 85 0 3 1501 222 37 0 0 chrX 120177776 120177803 -46472493 + (TTG)n Simple_repeat Simple_repeat 1 27 0 3 1501 899 122 14 0 chrX 120177861 120178000 -46472296 + B1_Mus1 SINE Alu 2 142 -6 3 1501 266 148 19 0 chrX 120178003 120178057 -46472239 + GA-rich Low_complexity Low_complexity 2 56 0 3 1501 204 67 0 0 chrX 120178193 120178223 -46472073 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1501 695 203 0 55 chrX 120178386 120178532 -46471764 + B1_Mus1 SINE Alu 2 139 -9 3 1501 1328 12 24 0 chrX 120178554 120178724 -46471572 + (GAAA)n Simple_repeat Simple_repeat 2 175 0 3 1501 239 229 0 0 chrX 120178757 120178827 -46471469 + T-rich Low_complexity Low_complexity 1 70 0 3 1501 357 24 0 0 chrX 120179006 120179048 -46471248 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1501 234 0 0 0 chrX 120179058 120179084 -46471212 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1501 859 150 7 0 chrX 120179120 120179260 -46471036 + B1_Mus1 SINE Alu 2 142 -6 3 1501 189 0 0 0 chrX 120179395 120179416 -46470880 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1501 434 49 0 16 chrX 120179547 120179609 -46470687 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 1501 24 0 0 0 chrX 120179616 120179640 -46470656 + AT_rich Low_complexity Low_complexity 1 24 0 3 1501 895 150 7 0 chrX 120179674 120179814 -46470482 + B1_Mus1 SINE Alu 2 142 -6 3 1501 471 202 0 0 chrX 120179818 120179917 -46470379 + GA-rich Low_complexity Low_complexity 2 100 0 3 1501 195 42 0 0 chrX 120180158 120180182 -46470114 + (TTG)n Simple_repeat Simple_repeat 1 24 0 3 1501 887 129 14 0 chrX 120180240 120180379 -46469917 + B1_Mus1 SINE Alu 2 142 -6 3 1501 266 148 19 0 chrX 120180382 120180436 -46469860 + GA-rich Low_complexity Low_complexity 2 56 0 4 1501 180 0 0 0 chrX 120180582 120180602 -46469694 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 1501 707 203 0 42 chrX 120180765 120180909 -46469387 + B1_Mus1 SINE Alu 2 139 -9 4 1501 1116 14 21 0 chrX 120180931 120181073 -46469223 + (GAAA)n Simple_repeat Simple_repeat 3 147 0 4 1501 257 222 0 0 chrX 120181106 120181178 -46469118 + T-rich Low_complexity Low_complexity 1 72 0 4 1501 339 25 0 0 chrX 120181357 120181397 -46468899 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1501 210 37 0 0 chrX 120181407 120181434 -46468862 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1501 834 144 14 0 chrX 120181470 120181609 -46468687 + B1_Mus1 SINE Alu 2 142 -6 4 1501 234 0 0 0 chrX 120181742 120181768 -46468528 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1501 524 42 0 14 chrX 120181899 120181971 -46468325 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 1501 24 0 0 0 chrX 120181978 120182002 -46468294 + AT_rich Low_complexity Low_complexity 1 24 0 4 1501 908 143 7 0 chrX 120182036 120182176 -46468120 + B1_Mus1 SINE Alu 2 142 -6 4 1501 714 180 0 0 chrX 120182179 120182318 -46467978 + GA-rich Low_complexity Low_complexity 2 140 0 4 1501 222 37 0 0 chrX 120182562 120182589 -46467707 + (TTG)n Simple_repeat Simple_repeat 1 27 0 4 1501 899 122 14 0 chrX 120182647 120182786 -46467510 + B1_Mus1 SINE Alu 2 142 -6 4 1501 266 148 19 0 chrX 120182789 120182843 -46467453 + GA-rich Low_complexity Low_complexity 2 56 0 4 1501 204 67 0 0 chrX 120182979 120183009 -46467287 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 1501 712 187 0 36 chrX 120183172 120183311 -46466985 + B1_Mus1 SINE Alu 2 135 -13 4 1501 994 16 16 0 chrX 120183337 120183461 -46466835 + (GAAA)n Simple_repeat Simple_repeat 2 127 0 4 1501 228 35 0 0 chrX 120183492 120183521 -46466775 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 1501 244 188 35 23 chrX 120183705 120183746 -46466550 + T-rich Low_complexity Low_complexity 47 89 0 4 1501 537 16 0 0 chrX 120183746 120183808 -46466488 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 1501 244 188 35 23 chrX 120183808 120183853 -46466443 + T-rich Low_complexity Low_complexity 3 46 0 4 1501 878 143 7 0 chrX 120183875 120184015 -46466281 + B1_Mus1 SINE Alu 2 142 -6 4 1501 198 0 0 0 chrX 120184149 120184171 -46466125 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1501 506 43 0 14 chrX 120184302 120184372 -46465924 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 1501 24 0 0 0 chrX 120184379 120184403 -46465893 + AT_rich Low_complexity Low_complexity 1 24 0 4 1501 908 143 7 0 chrX 120184437 120184577 -46465719 + B1_Mus1 SINE Alu 2 142 -6 4 1501 546 108 0 0 chrX 120184603 120184686 -46465610 + (GGAA)n Simple_repeat Simple_repeat 3 85 0 4 1501 222 37 0 0 chrX 120184938 120184965 -46465331 + (TTG)n Simple_repeat Simple_repeat 1 27 0 4 1501 899 122 14 0 chrX 120185023 120185162 -46465134 + B1_Mus1 SINE Alu 2 142 -6 4 1501 266 148 19 0 chrX 120185167 120185221 -46465075 + GA-rich Low_complexity Low_complexity 2 56 0 4 1501 180 0 0 0 chrX 120185367 120185387 -46464909 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 1501 707 203 0 42 chrX 120185550 120185694 -46464602 + B1_Mus1 SINE Alu 2 139 -9 4 1501 1404 11 17 0 chrX 120185717 120185891 -46464405 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 4 1501 248 198 0 69 chrX 120185922 120186009 -46464287 + T-rich Low_complexity Low_complexity 6 86 0 4 1501 339 25 0 0 chrX 120186174 120186214 -46464082 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1501 228 35 0 0 chrX 120186224 120186253 -46464043 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1501 834 144 14 0 chrX 120186289 120186428 -46463868 + B1_Mus1 SINE Alu 2 142 -6 4 1501 218 236 3 69 chrX 120186561 120186711 -46463585 + T-rich Low_complexity Low_complexity 1 140 0 4 1501 452 48 0 16 chrX 120186711 120186775 -46463521 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1501 205 227 5 104 chrX 120186775 120186818 -46463478 + T-rich Low_complexity Low_complexity 3 44 0 4 1501 866 157 7 0 chrX 120186840 120186980 -46463316 + B1_Mus1 SINE Alu 2 142 -6 4 1501 468 172 0 0 chrX 120186983 120187070 -46463226 + GA-rich Low_complexity Low_complexity 2 88 0 4 1501 195 42 0 0 chrX 120187310 120187334 -46462962 + (TTG)n Simple_repeat Simple_repeat 1 24 0 4 1501 899 122 14 0 chrX 120187392 120187531 -46462765 + B1_Mus1 SINE Alu 2 142 -6 4 1501 309 169 0 0 chrX 120187536 120187595 -46462701 + GA-rich Low_complexity Low_complexity 2 60 0 4 1501 180 0 0 0 chrX 120187740 120187760 -46462536 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 1501 700 187 0 50 chrX 120187923 120188064 -46462232 + B1_Mus1 SINE Alu 2 135 -13 4 1501 1182 7 20 0 chrX 120188090 120188237 -46462059 + (GAAA)n Simple_repeat Simple_repeat 2 151 0 4 1501 248 185 0 69 chrX 120188268 120188355 -46461941 + T-rich Low_complexity Low_complexity 6 86 0 4 1501 255 181 0 78 chrX 120188480 120188521 -46461775 + T-rich Low_complexity Low_complexity 44 83 0 4 1501 390 74 0 0 chrX 120188521 120188575 -46461721 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 1501 255 181 0 78 chrX 120188575 120188623 -46461673 + T-rich Low_complexity Low_complexity 1 43 0 4 1501 878 143 7 0 chrX 120188644 120188784 -46461512 + B1_Mus1 SINE Alu 2 142 -6 4 1501 243 0 0 0 chrX 120188917 120188944 -46461352 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1501 416 51 0 17 chrX 120189075 120189135 -46461161 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1501 24 0 0 0 chrX 120189142 120189166 -46461130 + AT_rich Low_complexity Low_complexity 1 24 0 4 1501 920 136 7 0 chrX 120189200 120189340 -46460956 + B1_Mus1 SINE Alu 2 142 -6 4 1501 543 187 0 0 chrX 120189345 120189452 -46460844 + GA-rich Low_complexity Low_complexity 2 108 0 4 1501 907 122 14 0 chrX 120189768 120189907 -46460389 + B1_Mus1 SINE Alu 2 142 -6 4 1501 218 136 23 0 chrX 120189911 120189955 -46460341 + GA-rich Low_complexity Low_complexity 2 46 0 4 1501 240 122 0 0 chrX 120190077 120190118 -46460178 + (T)n Simple_repeat Simple_repeat 1 41 0 4 1501 769 173 7 0 chrX 120190298 120190437 -46459859 + B1_Mus1 SINE Alu 2 141 -7 4 1501 206 132 19 0 chrX 120190448 120190501 -46459795 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 4 1501 261 0 0 0 chrX 120190557 120190586 -46459710 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1501 216 0 0 0 chrX 120190644 120190668 -46459628 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1501 210 230 27 13 chrX 120190753 120190810 -46459486 + T-rich Low_complexity Low_complexity 19 76 0 4 1501 212 0 36 0 chrX 120190810 120190838 -46459458 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 1501 210 230 27 13 chrX 120190838 120190855 -46459441 + T-rich Low_complexity Low_complexity 2 18 0 4 1501 830 157 0 7 chrX 120190900 120191041 -46459255 + B1_Mus1 SINE Alu 3 142 -6 4 1501 261 0 0 0 chrX 120191312 120191341 -46458955 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1501 21 0 0 0 chrX 120191347 120191368 -46458928 + AT_rich Low_complexity Low_complexity 1 21 0 4 1501 233 280 12 47 chrX 120191401 120191469 -46458827 + B1_Mus1 SINE Alu 2 68 -80 4 1501 4152 29 2 4 chrX 120191469 120191952 -46458344 + LTRIS_Mm LTR ERV1 1 482 0 4 1501 233 280 12 47 chrX 120191952 120191969 -46458327 + B1_Mus1 SINE Alu 69 84 -64 4 187 20217 54 18 11 chrX 120191969 120194802 -46455494 + MuRRS-int LTR ERV1 19 3105 -1585 4 1502 8544 50 1 22 chrX 120194797 120195881 -46454415 + MuRRS-int LTR ERV1 3630 4690 0 4 1502 4195 23 0 4 chrX 120195881 120196365 -46453931 + LTRIS_Mm LTR ERV1 1 482 0 4 1502 420 92 46 0 chrX 120196373 120196438 -46453858 + B1_Mus2 SINE Alu 74 141 -6 4 1502 228 111 0 0 chrX 120196442 120196478 -46453818 + (A)n Simple_repeat Simple_repeat 1 36 0 4 1502 222 37 0 0 chrX 120196690 120196717 -46453579 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1502 968 122 0 13 chrX 120196777 120196926 -46453370 + B1_Mus1 SINE Alu 2 148 0 4 1502 195 69 0 0 chrX 120196937 120196966 -46453330 + (A)n Simple_repeat Simple_repeat 1 29 0 4 1502 240 235 14 68 chrX 120197098 120197185 -46453111 + T-rich Low_complexity Low_complexity 58 138 0 4 1502 279 0 0 0 chrX 120197185 120197216 -46453080 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 1502 240 235 14 68 chrX 120197216 120197274 -46453022 + T-rich Low_complexity Low_complexity 2 57 0 4 1502 851 137 14 0 chrX 120197295 120197434 -46452862 + B1_Mus1 SINE Alu 2 142 -6 4 1502 192 91 0 64 chrX 120197437 120197484 -46452812 + A-rich Low_complexity Low_complexity 4 47 0 4 1502 238 82 0 58 chrX 120197632 120197684 -46452612 + (TTTTTG)n Simple_repeat Simple_repeat 2 50 0 4 1502 201 39 0 0 chrX 120197728 120197754 -46452542 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1502 200 180 32 16 chrX 120197758 120197820 -46452476 + T-rich Low_complexity Low_complexity 2 64 0 4 1502 1058 116 0 0 chrX 120197850 120197996 -46452300 - B1_Mus2 SINE Alu 0 147 2 4 1502 968 122 0 13 chrX 120198028 120198177 -46452119 + B1_Mus1 SINE Alu 2 148 0 4 1502 240 59 0 0 chrX 120198188 120198222 -46452074 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1502 315 0 0 0 chrX 120198443 120198478 -46451818 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 4 1502 200 56 0 77 chrX 120198481 120198520 -46451776 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1502 860 136 14 0 chrX 120198561 120198701 -46451595 + B1_Mus1 SINE Alu 2 143 -5 4 1502 204 98 0 68 chrX 120198703 120198747 -46451549 + A-rich Low_complexity Low_complexity 4 44 0 4 1502 216 0 0 0 chrX 120198783 120198807 -46451489 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1502 222 62 20 59 chrX 120198901 120198952 -46451344 + (TTTTTG)n Simple_repeat Simple_repeat 2 50 0 4 1502 293 218 14 19 chrX 120198995 120199114 -46451182 + T-rich Low_complexity Low_complexity 1 118 0 4 1502 901 121 43 0 chrX 120199114 120199254 -46451042 - B1_Mus2 SINE Alu 0 147 2 4 1502 876 145 14 0 chrX 120199286 120199431 -46450865 + B1_Mus1 SINE Alu 2 148 0 5 1502 189 0 0 0 chrX 120199431 120199452 -46450844 + (CAAAAA)n Simple_repeat Simple_repeat 6 26 0 5 1502 546 16 0 0 chrX 120199453 120199516 -46450780 + (GAAA)n Simple_repeat Simple_repeat 3 65 0 5 1502 21 36 0 0 chrX 120199640 120199668 -46450628 + AT_rich Low_complexity Low_complexity 1 28 0 5 1502 978 127 0 0 chrX 120199938 120200080 -46450216 + B1_Mus2 SINE Alu 1 142 -5 5 1502 182 105 26 0 chrX 120200094 120200132 -46450164 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 5 1502 559 283 176 45 chrX 120200371 120200707 -46449589 + RLTR45 LTR ERVK 103 482 0 5 1502 1431 285 32 43 chrX 120200709 120201238 -46449058 + RLTR45-int LTR ERVK 3 525 -6719 5 1502 240 306 81 0 chrX 120201614 120201676 -46448620 + tRNA-Ala-GCG tRNA tRNA 1 67 -8 5 1502 23 33 0 0 chrX 120201694 120201724 -46448572 + AT_rich Low_complexity Low_complexity 1 30 0 5 1502 1267 249 37 22 chrX 120201724 120202048 -46448248 - Lx6 LINE L1 -4 7456 7128 5 1502 751 148 0 39 chrX 120202045 120202200 -46448096 + L1_Mus4 LINE L1 6484 6632 -4 5 1502 1797 244 47 2 chrX 120202204 120202607 -46447689 - Lx6 LINE L1 -318 7142 6722 5 1502 285 246 0 28 chrX 120203072 120203143 -46447153 - RLTR28B LTR ERVL -10 514 446 5 1502 591 231 104 24 chrX 120203287 120203451 -46446845 - RLTR28B LTR ERVL -304 177 1 5 1502 308 287 296 5 chrX 120203458 120203661 -46446635 + Lx7 LINE L1 7106 7367 -329 5 1502 226 298 122 50 chrX 120203630 120203810 -46446486 + Lx7 LINE L1 7487 7679 -17 5 1502 208 139 0 0 chrX 120203967 120204003 -46446293 + (T)n Simple_repeat Simple_repeat 1 36 0 5 1502 1008 96 0 33 chrX 120204201 120204352 -46445944 + B1_Mus1 SINE Alu 2 147 -1 5 1502 286 301 86 39 chrX 120204973 120205101 -46445195 + RMER12 LTR ERVK 740 873 -449 5 1502 188 34 0 33 chrX 120205462 120205492 -46444804 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 1502 1108 89 0 0 chrX 120205501 120205647 -46444649 - B1_Mus2 SINE Alu 0 147 2 5 1502 276 374 65 0 chrX 120207335 120207474 -46442822 + Lx8 LINE L1 7203 7350 -123 5 1502 405 0 0 0 chrX 120207542 120207587 -46442709 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 1502 753 85 0 0 chrX 120208108 120208214 -46442082 + (TTTC)n Simple_repeat Simple_repeat 1 106 0 5 1502 832 289 22 16 chrX 120208336 120208653 -46441643 + L1VL2 LINE L1 84 402 -5933 5 1502 3561 163 33 74 chrX 120208781 120210031 -46440265 + L1Md_F LINE L1 227 1459 -2358 5 1502 288 0 0 0 chrX 120210031 120210063 -46440233 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 5 1502 1258 92 49 0 chrX 120210068 120210253 -46440043 + B2_Mm2 SINE B2 1 194 -1 5 1502 3561 110 17 46 chrX 120210253 120210553 -46439743 + L1Md_F LINE L1 1460 1741 -2076 5 1502 562 252 36 76 chrX 120210552 120210775 -46439521 + L1VL1 LINE L1 182 395 -6027 5 1502 364 288 56 66 chrX 120210779 120210976 -46439320 - RLTR46 LTR ERVK 0 320 126 5 1502 693 188 14 21 chrX 120211020 120211161 -46439135 - RLTR46 LTR ERVK -180 140 1 5 1502 22264 175 28 27 chrX 120211161 120215683 -46434613 - MMERVK10C-int LTR ERVK 0 7581 3058 5 1502 1918 102 173 0 chrX 120215683 120216208 -46434088 - MMERVK10C-int LTR ERVK -4652 2929 2314 5 1502 1486 164 109 0 chrX 120216209 120216484 -46433812 - MMERVK10C-int LTR ERVK -5392 2189 1885 5 1502 258 161 36 0 chrX 120216486 120216542 -46433754 - MMERVK10C-int LTR ERVK -4260 1146 1089 5 1502 403 192 116 48 chrX 120216602 120216800 -46433496 - RMER16-int LTR ERVK -4887 519 431 5 1502 305 218 152 13 chrX 120217557 120217636 -46432660 - RLTR1B-int LTR ERV1 -2376 923 834 5 1502 1734 282 29 21 chrX 120217728 120218363 -46431933 - MMERVK10C-int LTR ERVK -5704 1117 246 5 1502 8192 105 7 1 chrX 120218901 120220507 -46429789 - L1_Mus2 LINE L1 -297 6269 4652 5 1502 364 300 123 49 chrX 120220636 120221137 -46429159 + Charlie2b DNA MER1_type 1779 2242 -540 5 1502 1114 88 0 0 chrX 120221137 120221285 -46429011 - B1_Mus1 SINE Alu 0 148 1 5 1502 373 301 116 117 chrX 120221285 120221531 -46428765 + Charlie2b DNA MER1_type 2243 2512 -270 5 1502 4187 123 122 3 chrX 120221531 120222225 -46428071 - L1_Mus3 LINE L1 -4 6634 5858 5 1502 373 301 93 36 chrX 120222225 120222448 -46427848 + Charlie2b DNA MER1_type 2513 2749 -33 5 1502 559 344 12 0 chrX 120222453 120222613 -46427683 + B3 SINE B2 5 166 -50 5 1502 351 0 0 0 chrX 120222613 120222652 -46427644 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1502 376 113 0 0 chrX 120222706 120222777 -46427519 - L1_Mus3 LINE L1 -4 6634 6564 5 1502 7475 61 9 2 chrX 120222777 120223777 -46426519 + MTA_Mm-int LTR MaLR 92 1098 0 5 1502 3098 32 67 0 chrX 120223777 120224148 -46426148 + MTA_Mm LTR MaLR 1 396 0 5 1502 4085 186 6 8 chrX 120224175 120224973 -46425323 - L1_Mus3 LINE L1 -526 5357 4561 5 1502 2679 160 0 34 chrX 120224971 120225464 -46424832 + L1_Mus3 LINE L1 5365 5782 -101 5 1502 963 109 0 14 chrX 120225464 120225604 -46424692 - B1_Mm SINE Alu -9 138 1 5 1502 5782 119 3 11 chrX 120225604 120226491 -46423805 + L1_Mus3 LINE L1 5771 6626 -12 5 1502 1276 206 52 100 chrX 120226499 120227282 -46423014 + RMER17C-int LTR ERVK 1946 2477 -761 5 1502 540 154 0 0 chrX 120227297 120227420 -46422876 + CT-rich Low_complexity Low_complexity 2 124 0 5 1502 219 329 0 14 chrX 120227435 120227506 -46422790 + CT-rich Low_complexity Low_complexity 3 72 0 5 1502 290 310 0 22 chrX 120227632 120227721 -46422575 + B4A SINE B4 206 292 0 5 1502 1059 330 34 48 chrX 120227815 120228435 -46421861 + RMER15-int LTR ERVL 1145 1755 -3244 5 1502 602 354 56 11 chrX 120228450 120228807 -46421489 + MTE2b LTR MaLR 5 377 -2 5 1502 585 321 10 25 chrX 120228815 120229016 -46421280 + MTE2b-int LTR MaLR 6 203 -1377 5 1502 1395 293 20 15 chrX 120229024 120229429 -46420867 - MTD LTR MaLR -12 407 1 5 1502 527 335 27 5 chrX 120229434 120229620 -46420676 + MTE2b-int LTR MaLR 213 402 -1178 5 1502 732 327 66 16 chrX 120229636 120229941 -46420355 + MTE2b-int LTR MaLR 553 872 -708 5 1502 753 316 58 48 chrX 120229992 120230304 -46419992 + ORR1D2 LTR MaLR 1 315 -55 5 1502 243 341 36 128 chrX 120230306 120230501 -46419795 - RLTR24 LTR ERV1 -75 454 278 5 1502 3192 199 51 49 chrX 120230502 120231683 -46418613 + Lx5 LINE L1 5176 6380 -670 5 1502 444 230 10 0 chrX 120231684 120231784 -46418512 - RMER19A LTR ERVK -1 736 636 5 1502 206 156 22 0 chrX 120231885 120231930 -46418366 + T-rich Low_complexity Low_complexity 5 50 0 5 1502 1550 280 61 50 chrX 120231930 120232524 -46417772 + ORR1D2-int LTR MaLR 50 649 -721 5 1502 555 16 0 0 chrX 120232530 120232594 -46417702 + (GAAA)n Simple_repeat Simple_repeat 2 65 0 5 1502 207 0 0 0 chrX 120232838 120232861 -46417435 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1502 1153 243 149 42 chrX 120233201 120233674 -46416622 + ORR1D2-int LTR MaLR 825 1347 -23 5 1502 3425 199 16 85 chrX 120235246 120236010 -46414286 + RMER6D LTR ERVK 1 711 -9 5 1502 277 293 7 29 chrX 120236753 120236890 -46413406 + GA-rich Low_complexity Low_complexity 2 135 0 5 1502 336 143 0 0 chrX 120236937 120236993 -46413303 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 5 1502 2118 215 106 8 chrX 120237494 120238023 -46412273 - Lx3C LINE L1 -5 6971 6391 5 1502 3840 153 18 8 chrX 120238023 120238689 -46411607 - L1_Mus3 LINE L1 0 6638 5966 5 1502 12094 166 56 3 chrX 120238689 120239056 -46411240 + L1_Mus3 LINE L1 3466 3861 -2022 5 1502 2756 65 0 0 chrX 120239056 120239412 -46410884 + L1Md_T LINE L1 6227 6582 0 5 1502 12094 152 47 2 chrX 120239412 120241396 -46408900 + L1_Mus3 LINE L1 3862 5940 -698 5 1502 12956 167 26 17 chrX 120241402 120244414 -46405882 - Lx3C LINE L1 -576 6400 3363 5 1502 582 318 74 31 chrX 120244415 120244739 -46405557 + ORR1D2-int LTR MaLR 1243 1580 0 5 1502 901 323 15 11 chrX 120244827 120245087 -46405209 + MTE2b LTR MaLR 119 379 0 5 1502 745 357 7 82 chrX 120245340 120245452 -46404844 + B4A SINE B4 11 117 -175 5 1502 1139 58 0 7 chrX 120245452 120245607 -46404689 - L1Md_F2 LINE L1 -13 6569 6416 5 1502 745 357 7 82 chrX 120245607 120245799 -46404497 + B4A SINE B4 118 292 0 5 1502 289 392 25 0 chrX 120245820 120245978 -46404318 + RMER15-int LTR ERVL 2002 2163 -2836 5 1502 645 280 28 0 chrX 120246290 120246504 -46403792 - URR1B DNA MER1_type -4 221 2 5 1502 986 354 50 44 chrX 120246504 120247232 -46403064 + RMER15-int LTR ERVL 4261 4992 -7 5 1502 481 353 98 35 chrX 120247866 120248204 -46402092 - L2a LINE L2 -84 3342 2984 5 1502 199 372 19 10 chrX 120248352 120248455 -46401841 - L2a LINE L2 -949 2470 2367 5 1502 252 114 0 0 chrX 120248736 120248771 -46401525 - L1_Mur1 LINE L1 -315 5571 5537 5 1502 320 300 8 15 chrX 120248866 120248998 -46401298 + GA-rich Low_complexity Low_complexity 1 131 0 5 1502 334 297 0 35 chrX 120249029 120249172 -46401124 + GA-rich Low_complexity Low_complexity 2 139 0 5 1502 282 322 22 22 chrX 120249285 120249463 -46400833 + CT-rich Low_complexity Low_complexity 2 179 0 5 1502 203 348 0 27 chrX 120249542 120249725 -46400571 + CT-rich Low_complexity Low_complexity 2 179 0 5 1502 336 314 6 25 chrX 120250020 120250183 -46400113 + GA-rich Low_complexity Low_complexity 2 161 0 5 1502 492 132 0 0 chrX 120250183 120250266 -46400030 + (GAAA)n Simple_repeat Simple_repeat 3 85 0 5 1502 180 152 0 0 chrX 120250502 120250535 -46399761 + CT-rich Low_complexity Low_complexity 2 34 0 5 1502 363 328 6 11 chrX 120250855 120251031 -46399265 + CT-rich Low_complexity Low_complexity 2 176 0 5 1502 457 99 12 12 chrX 120251103 120251185 -46399111 + (TA)n Simple_repeat Simple_repeat 2 83 0 5 1502 234 81 0 0 chrX 120251185 120251221 -46399075 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1502 426 325 0 18 chrX 120251226 120251389 -46398907 + CT-rich Low_complexity Low_complexity 1 160 0 5 1502 372 327 7 37 chrX 120251593 120251934 -46398362 + GA-rich Low_complexity Low_complexity 1 331 0 5 1502 279 289 22 24 chrX 120252189 120252474 -46397822 + GA-rich Low_complexity Low_complexity 1 284 0 5 1502 349 259 113 49 chrX 120252583 120252725 -46397571 - HAL1-3A_ME LINE L1 -417 2441 2291 5 1502 344 358 11 24 chrX 120252734 120253039 -46397257 + CT-rich Low_complexity Low_complexity 1 300 0 5 1502 450 0 0 0 chrX 120253089 120253139 -46397157 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 1502 314 277 75 68 chrX 120253153 120253300 -46396996 - HAL1-3A_ME LINE L1 -419 2439 2292 5 1502 236 336 7 25 chrX 120253304 120253511 -46396785 + CT-rich Low_complexity Low_complexity 1 203 0 5 1502 259 354 7 24 chrX 120253554 120253778 -46396518 + GA-rich Low_complexity Low_complexity 1 220 0 5 1502 218 185 12 36 chrX 120253804 120253888 -46396408 + GA-rich Low_complexity Low_complexity 5 86 0 5 1502 359 233 21 32 chrX 120253926 120254210 -46396086 + GA-rich Low_complexity Low_complexity 1 280 0 5 1502 183 270 17 17 chrX 120254276 120254453 -46395843 + GA-rich Low_complexity Low_complexity 1 177 0 5 1502 387 0 0 0 chrX 120255717 120255760 -46394536 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1502 198 179 0 0 chrX 120257091 120257147 -46393149 + T-rich Low_complexity Low_complexity 5 60 0 5 1502 238 146 20 40 chrX 120257236 120257286 -46393010 - MT2B2 LTR ERVL 0 584 536 5 1502 623 94 10 0 chrX 120257300 120257396 -46392900 + (TC)n Simple_repeat Simple_repeat 2 98 0 5 1502 6689 113 6 1 chrX 120257458 120258432 -46391864 + L1_Mus3 LINE L1 5657 6635 -3 5 1502 220 149 21 21 chrX 120258536 120258584 -46391712 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1502 670 333 0 30 chrX 120259270 120259471 -46390825 + B3 SINE B2 17 211 -5 5 1502 524 151 10 31 chrX 120259665 120259761 -46390535 + RLTR9C LTR ERVK 300 393 0 5 1502 317 255 19 56 chrX 120259762 120259870 -46390426 + MMETn-int LTR ERVK 1 104 -4740 5 1502 527 240 31 84 chrX 120259905 120260132 -46390164 + MMETn-int LTR ERVK 108 322 -4522 5 1502 3224 188 77 71 chrX 120260105 120261041 -46389255 + MMETn-int LTR ERVK 364 1631 -5775 5 1502 2237 198 22 34 chrX 120261068 120261576 -46388720 + MMETn-int LTR ERVK 2496 2997 -4409 5 1502 919 146 0 18 chrX 120261576 120261744 -46388552 + RLTR13D1 LTR ERVK 486 650 -156 5 1502 1906 140 37 17 chrX 120262320 120262668 -46387628 + MMETn-int LTR ERVK 3442 3796 -3610 5 1502 4069 67 40 9 chrX 120262668 120263211 -46387085 - LTRIS2 LTR ERV1 0 564 5 5 1502 943 223 22 13 chrX 120263214 120263446 -46386850 - RLTR1B-int LTR ERV1 -42 5021 4788 5 1502 9058 141 92 49 chrX 120263530 120266190 -46384106 - RLTR1B-int LTR ERV1 -486 2813 760 5 1502 4138 142 78 18 chrX 120266181 120266900 -46383396 - RMER16-int LTR ERVK -3962 1444 683 5 1502 940 157 61 17 chrX 120266885 120267066 -46383230 - RMER16-int LTR ERVK -5076 330 142 5 1502 671 95 0 2 chrX 120267418 120267522 -46382774 - RLTR1B-int LTR ERV1 -3011 288 139 5 1502 494 0 0 0 chrX 120267737 120267799 -46382497 - LTRIS3 LTR ERV1 0 512 451 5 1502 3683 208 39 68 chrX 120267818 120269506 -46380790 + MMETn-int LTR ERVK 2357 3718 -1126 5 1502 426 139 0 25 chrX 120269718 120269799 -46380497 + MMETn-int LTR ERVK 7327 7405 -1 5 1502 1482 208 54 88 chrX 120269800 120270207 -46380089 + RLTR9C LTR ERVK 1 393 0 5 1502 904 85 0 8 chrX 120270207 120270338 -46379958 + L1_Mur1 LINE L1 2510 2639 -3247 5 1502 16690 121 3 7 chrX 120270336 120272935 -46377361 - L1_Mm LINE L1 -61 5822 3236 6 1502 2982 52 4 0 chrX 120272935 120273318 -46376978 - L1Md_F2 LINE L1 -643 5939 5584 6 1502 4957 78 0 6 chrX 120273318 120273986 -46376310 + L1Md_F2 LINE L1 5907 6570 -12 6 1502 460 95 135 0 chrX 120273986 120274060 -46376236 - 4.5SRNA scRNA scRNA -4 90 7 6 1502 1129 35 0 0 chrX 120274060 120274202 -46376094 + L1_Mm LINE L1 3275 3416 -2467 6 1502 7011 139 12 32 chrX 120274202 120275432 -46374864 + Lx3A LINE L1 5770 6975 -6 6 1502 320 41 0 39 chrX 120275435 120275486 -46374810 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 6 1502 504 0 0 0 chrX 120275536 120275592 -46374704 + (TC)n Simple_repeat Simple_repeat 2 57 0 6 1502 234 0 0 0 chrX 120275723 120275749 -46374547 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1502 445 225 11 0 chrX 120276626 120276715 -46373581 + ID_B1 SINE B4 135 224 0 6 1502 297 333 234 0 chrX 120276886 120277027 -46373269 + B3A SINE B2 8 181 -17 6 1502 405 0 0 0 chrX 120277029 120277074 -46373222 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1502 646 311 19 9 chrX 120277407 120277618 -46372678 - ID_B1 SINE B4 -8 216 4 6 1502 1197 297 24 10 chrX 120277705 120278116 -46372180 + MTD LTR MaLR 3 419 0 6 1502 317 336 26 26 chrX 120278202 120278318 -46371978 + PB1D10 SINE Alu 2 117 0 6 1502 387 341 15 23 chrX 120278356 120278488 -46371808 + RSINE1 SINE B4 4 134 -31 6 1502 269 51 0 25 chrX 120278510 120278550 -46371746 + (TAA)n Simple_repeat Simple_repeat 3 41 0 6 1502 703 308 46 113 chrX 120278708 120279078 -46371218 - MTE2a LTR MaLR -34 345 1 6 1502 1575 317 153 40 chrX 120279079 120279831 -46370465 - MTE2a-int LTR MaLR -1 1579 743 6 1502 1034 320 22 25 chrX 120279911 120280276 -46370020 - MTE2a-int LTR MaLR -1180 400 37 6 1502 30 27 0 0 chrX 120280455 120280492 -46369804 + AT_rich Low_complexity Low_complexity 1 37 0 6 1502 279 0 0 0 chrX 120280588 120280619 -46369677 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1502 324 322 63 19 chrX 120280636 120280842 -46369454 - Lx9 LINE L1 -205 7439 7225 6 1502 439 237 35 78 chrX 120280896 120281038 -46369258 - Lx9 LINE L1 -547 7097 6962 6 1502 2883 56 53 3 chrX 120281887 120282264 -46368032 + MTA_Mm LTR MaLR 1 396 0 6 1502 234 0 0 0 chrX 120282573 120282599 -46367697 + (TTA)n Simple_repeat Simple_repeat 1 26 0 6 1502 246 128 0 0 chrX 120282691 120282730 -46367566 + (TC)n Simple_repeat Simple_repeat 2 40 0 6 1502 188 86 29 0 chrX 120282800 120282835 -46367461 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1502 516 32 0 0 chrX 120282835 120282896 -46367400 + (GA)n Simple_repeat Simple_repeat 2 63 0 6 1502 519 279 124 37 chrX 120282935 120283177 -46367119 - Lx7 LINE L1 -398 7298 7036 6 1502 352 228 0 32 chrX 120284087 120284182 -46366114 - RNLTR23 LTR ERVK 0 642 551 6 1502 336 111 0 0 chrX 120284182 120284245 -46366051 + (A)n Simple_repeat Simple_repeat 1 63 0 6 1502 22 0 0 0 chrX 120284635 120284657 -46365639 + AT_rich Low_complexity Low_complexity 1 22 0 6 1502 4486 115 6 100 chrX 120285063 120285903 -46364393 + L1Md_F LINE L1 360 1120 -5399 6 1502 4825 63 0 2 chrX 120285906 120286527 -46363769 + L1Md_F2 LINE L1 5963 6582 0 6 1502 1572 243 61 26 chrX 120286748 120287204 -46363092 - Lx2B LINE L1 -5 6995 6524 6 1502 791 178 26 7 chrX 120287196 120287349 -46362947 - Lx2B LINE L1 -689 6311 6156 6 1502 370 350 16 24 chrX 120287372 120287495 -46362801 - B3 SINE B2 -93 123 2 6 1502 1164 75 0 0 chrX 120287728 120287874 -46362422 + B1_Mm SINE Alu 2 147 0 6 1502 225 154 0 0 chrX 120287874 120287913 -46362383 + A-rich Low_complexity Low_complexity 1 39 0 6 1502 227 103 0 25 chrX 120288109 120288149 -46362147 + (TATG)n Simple_repeat Simple_repeat 4 42 0 6 1502 1143 254 57 83 chrX 120288970 120289357 -46360939 - ORR1C2 LTR MaLR 0 384 8 6 1502 786 175 0 0 chrX 120289373 120289527 -46360769 - Lx2 LINE L1 0 6997 6844 6 1502 1734 183 6 3 chrX 120289527 120289867 -46360429 + Lx2 LINE L1 5904 6244 -753 6 1502 229 250 0 137 chrX 120289867 120289948 -46360348 - LTR68 LTR ERV1 -454 286 215 6 1502 282 87 0 0 chrX 120289948 120289994 -46360302 + (TCTCTG)n Simple_repeat Simple_repeat 2 47 0 6 1502 229 250 0 137 chrX 120289994 120290014 -46360282 - LTR68 LTR ERV1 -526 214 199 6 1502 267 31 0 0 chrX 120290052 120290084 -46360212 + (TGG)n Simple_repeat Simple_repeat 1 32 0 6 1502 445 291 28 132 chrX 120290090 120290272 -46360024 - RSINE1 SINE B4 0 165 3 6 1502 339 25 0 0 chrX 120290388 120290428 -46359868 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 6 1502 821 243 66 79 chrX 120290556 120290898 -46359398 + ORR1E LTR MaLR 24 379 0 6 1502 450 270 84 15 chrX 120290965 120291168 -46359128 + L1MD3 LINE L1 7766 7982 -13 6 1502 23 0 0 0 chrX 120291967 120291990 -46358306 + AT_rich Low_complexity Low_complexity 1 23 0 6 1502 2603 276 66 28 chrX 120292072 120293059 -46357237 - RMER1B Other Other -4 1062 25 6 1502 1121 261 18 22 chrX 120293062 120293336 -46356960 + ORR1B1 LTR MaLR 116 388 -6 6 1502 1034 131 37 155 chrX 120293564 120293835 -46356461 + Lx3C LINE L1 5889 6127 -849 6 1502 673 95 19 0 chrX 120293835 120293940 -46356356 + RMER17D2 LTR ERVK 703 809 0 6 1502 459 309 59 60 chrX 120295293 120295821 -46354475 + MuRRS4-int LTR ERV1 4459 4839 -224 6 1502 311 174 12 0 chrX 120296578 120296664 -46353632 + A-rich Low_complexity Low_complexity 1 87 0 6 1502 2483 151 26 26 chrX 120296665 120296798 -46353498 + Lx3_Mus LINE L1 5784 5910 -1099 6 1502 216 0 0 0 chrX 120296798 120296822 -46353474 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 6 1502 2483 151 26 26 chrX 120296822 120297145 -46353151 + Lx3_Mus LINE L1 5911 6240 -769 6 1502 5128 108 7 1 chrX 120297141 120297885 -46352411 - L1_Mm LINE L1 -180 5703 4956 6 1502 464 287 0 0 chrX 120297973 120298074 -46352222 - ORR1E LTR MaLR -258 101 1 6 1502 905 287 98 30 chrX 120298388 120298776 -46351520 + MT2A LTR ERVL 1 546 -55 6 1502 462 18 0 0 chrX 120298776 120298831 -46351465 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1502 360 348 108 70 chrX 120298831 120298872 -46351424 + MT2A LTR ERVL 547 599 -2 6 1502 2485 191 50 18 chrX 120298973 120299475 -46350821 - Lx2B LINE L1 -6 6994 6477 6 1502 2731 214 18 11 chrX 120299466 120300086 -46350210 + Lx2B LINE L1 5104 5727 -159 6 1502 342 175 68 120 chrX 120300087 120300204 -46350092 + MT2B LTR ERVL 154 264 -337 6 1502 717 119 76 45 chrX 120300107 120300239 -46350057 + B1_Mus1 SINE Alu 13 148 0 6 1502 290 0 39 39 chrX 120300245 120300297 -46349999 + (CAAAAA)n Simple_repeat Simple_repeat 3 54 0 6 1502 2640 165 13 41 chrX 120300300 120300337 -46349959 + Lx2B LINE L1 5770 5805 -1195 6 1502 279 0 0 0 chrX 120300337 120300368 -46349928 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 1502 2640 165 13 41 chrX 120300368 120300868 -46349428 + Lx2B LINE L1 5806 6292 -708 6 1502 311 290 61 61 chrX 120300875 120301040 -46349256 - L1M2 LINE L1 -2222 3921 3757 6 1502 331 333 10 10 chrX 120301050 120301150 -46349146 + RSINE1 SINE B4 56 155 -10 6 1502 270 178 0 0 chrX 120301208 120301253 -46349043 - L1_Mur3 LINE L1 -2356 3524 3480 6 1502 2604 77 3 0 chrX 120301450 120301803 -46348493 - RLTR13A LTR ERVK -501 354 1 6 1502 357 370 59 34 chrX 120302705 120302909 -46347387 - HAL1 LINE L1 -2137 370 162 6 1502 2034 240 75 16 chrX 120303066 120303569 -46346727 + RLTR20B3 LTR ERVK 1 533 -44 6 1502 1147 289 84 20 chrX 120304037 120304380 -46345916 - ORR1D1 LTR MaLR -1 373 9 6 1502 280 242 7 64 chrX 120304446 120304535 -46345761 + MTE2a LTR MaLR 1 82 -337 6 1502 1064 96 0 0 chrX 120304535 120304681 -46345615 + B1_Mm SINE Alu 2 147 0 6 1502 351 286 18 96 chrX 120304681 120304822 -46345474 + MTE2a LTR MaLR 68 169 -210 6 1502 7059 52 2 2 chrX 120304833 120305731 -46344565 + L1Md_F3 LINE L1 5673 6570 -14 6 1502 342 303 73 87 chrX 120305734 120305940 -46344356 + MTE2a LTR MaLR 167 369 -10 6 1502 750 312 8 16 chrX 120306437 120306815 -46343481 + Lx5 LINE L1 888 1262 -6466 6 1502 967 284 117 81 chrX 120306815 120307620 -46342676 + RLTR22_Mur LTR ERVK 1 802 -1046 6 1502 374 322 20 27 chrX 120307766 120307913 -46342383 + RLTR22_Mur LTR ERVK 1104 1249 -73 6 1502 6152 236 38 100 chrX 120307913 120312425 -46337871 + Lx5 LINE L1 2882 7031 -19 6 1502 649 243 123 59 chrX 120312423 120312599 -46337697 - Lx7 LINE L1 -29 7667 7459 6 1502 435 19 0 0 chrX 120312599 120312651 -46337645 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 1502 649 243 123 59 chrX 120312651 120312801 -46337495 - Lx7 LINE L1 -238 7458 7319 6 1502 2246 102 16 3 chrX 120312801 120313124 -46337172 - ORR1A2 LTR MaLR 0 327 1 6 1502 649 243 123 59 chrX 120313124 120313137 -46337159 - Lx7 LINE L1 -378 7318 7306 6 1502 1853 196 12 0 chrX 120313132 120313474 -46336822 + Lx7 LINE L1 6657 7002 -694 6 1502 547 262 7 47 chrX 120313580 120313728 -46336568 - MT2A LTR ERVL -391 142 1 6 1502 433 146 73 0 chrX 120313728 120313810 -46336486 - MERVL_2A-int LTR ERVL 0 5761 5674 6 1502 2852 257 45 15 chrX 120313932 120314683 -46335613 - ORR1D-int LTR MaLR -142 1228 455 6 1502 414 297 45 22 chrX 120314692 120314969 -46335327 + Lx8 LINE L1 5401 5672 -175 6 1502 484 320 20 10 chrX 120315313 120315512 -46334784 + Lx8 LINE L1 6332 6532 -941 6 1502 4988 96 15 12 chrX 120315913 120317309 -46332987 - L1Md_F LINE L1 -3979 1904 505 6 1502 797 193 7 0 chrX 120317338 120317478 -46332818 + L1_Mm LINE L1 5545 5685 -198 6 1502 4329 58 0 2 chrX 120317481 120318031 -46332265 - L1Md_F3 LINE L1 -2 6582 6034 6 1502 3570 43 2 0 chrX 120318031 120318505 -46331791 + L1Md_F3 LINE L1 5548 6022 -562 6 1502 6093 112 3 2 chrX 120318506 120319398 -46330898 + L1_Mus2 LINE L1 5674 6566 0 6 1502 952 208 45 24 chrX 120319402 120319692 -46330604 + L1_Mur3 LINE L1 2992 3287 -2593 6 1502 886 241 39 49 chrX 120319712 120319996 -46330300 + Lx7 LINE L1 5620 5900 -1796 6 1502 2061 199 24 31 chrX 120319999 120320239 -46330057 + MTC LTR MaLR 1 237 -184 6 1502 6406 99 6 1 chrX 120320239 120321128 -46329168 - RLTR13B1 LTR ERVK 0 893 1 6 1502 2061 199 24 31 chrX 120321128 120321311 -46328985 + MTC LTR MaLR 238 421 0 6 1502 382 319 40 49 chrX 120321317 120321541 -46328755 + Lx6 LINE L1 5905 6126 -1334 6 1502 294 290 0 39 chrX 120321536 120321665 -46328631 + Lx6 LINE L1 7322 7445 -15 6 1502 1326 218 20 78 chrX 120322031 120322375 -46327921 + RLTR21 LTR ERVK 1 324 -1248 6 1502 2068 211 57 76 chrX 120322414 120323008 -46327288 + RLTR21 LTR ERVK 550 1130 -442 6 1502 369 0 0 0 chrX 120323008 120323049 -46327247 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1502 2068 211 57 76 chrX 120323049 120323122 -46327174 + RLTR21 LTR ERVK 1131 1204 -368 6 1502 541 246 59 18 chrX 120323187 120323357 -46326939 - ORR1B2 LTR MaLR -190 177 1 6 1502 252 239 0 14 chrX 120323392 120323464 -46326832 + GA-rich Low_complexity Low_complexity 1 71 0 6 1502 409 115 11 11 chrX 120323467 120323555 -46326741 + (CATA)n Simple_repeat Simple_repeat 1 88 0 6 1503 752 96 0 9 chrX 120327914 120328030 -46322266 + (GAAA)n Simple_repeat Simple_repeat 3 117 0 6 1503 2925 124 7 0 chrX 120328780 120329217 -46321079 - L1_Mus3 LINE L1 -6 6632 6193 6 1503 195 26 103 0 chrX 120329386 120329425 -46320871 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 7 1503 287 300 10 10 chrX 120335543 120335644 -46314652 + MurSAT1 Satellite Satellite 17 117 -3 7 1503 281 308 40 32 chrX 120335926 120336188 -46314108 + MurSAT1 Satellite Satellite 1 264 -3 7 1503 347 324 12 12 chrX 120336228 120336432 -46313864 + MurSAT1 Satellite Satellite 1 204 -2 7 1503 308 302 15 5 chrX 120336649 120336777 -46313519 + MurSAT1 Satellite Satellite 1 129 -3 7 1503 381 237 20 15 chrX 120337094 120337205 -46313091 + MurSAT1 Satellite Satellite 1 111 -4 7 1503 268 301 34 6 chrX 120337713 120337833 -46312463 + MurSAT1 Satellite Satellite 1 123 -2 7 1503 295 320 15 5 chrX 120338827 120339002 -46311294 + MurSAT1 Satellite Satellite 1 176 -2 7 1503 232 368 0 0 chrX 120339976 120340090 -46310206 + MurSAT1 Satellite Satellite 5 118 -2 7 1503 283 284 21 21 chrX 120340563 120340660 -46309636 + MurSAT1 Satellite Satellite 1 97 -23 7 1503 323 311 14 9 chrX 120341124 120341315 -46308981 + MurSAT1 Satellite Satellite 1 191 -2 7 1503 266 340 0 0 chrX 120341711 120341808 -46308488 + MurSAT1 Satellite Satellite 1 97 -23 7 1503 279 348 0 0 chrX 120342269 120342387 -46307909 + MurSAT1 Satellite Satellite 1 118 -2 7 1503 279 250 26 13 chrX 120342855 120342957 -46307339 + MurSAT1 Satellite Satellite 1 103 0 7 1503 278 333 15 5 chrX 120343422 120343598 -46306698 + MurSAT1 Satellite Satellite 1 177 -2 7 1503 227 376 0 0 chrX 120343634 120343743 -46306553 + MurSAT1 Satellite Satellite 10 118 -2 7 1503 245 323 10 10 chrX 120344009 120344106 -46306190 + MurSAT1 Satellite Satellite 1 97 -23 7 1503 278 333 15 5 chrX 120344571 120344747 -46305549 + MurSAT1 Satellite Satellite 1 177 -2 7 1503 249 323 10 10 chrX 120345158 120345255 -46305041 + MurSAT1 Satellite Satellite 1 97 -23 7 1503 278 274 35 12 chrX 120345811 120345896 -46304400 + MurSAT1 Satellite Satellite 7 93 -27 7 1503 317 298 15 5 chrX 120346869 120347045 -46303251 + MurSAT1 Satellite Satellite 1 177 -2 7 1503 272 330 0 0 chrX 120347456 120347553 -46302743 + MurSAT1 Satellite Satellite 1 97 -23 7 1503 227 301 16 117 chrX 120347706 120347834 -46302462 + MurSAT1 Satellite Satellite 2 116 -4 7 1503 279 274 35 12 chrX 120348109 120348194 -46302102 + MurSAT1 Satellite Satellite 7 93 -27 7 1503 237 350 0 0 chrX 120348605 120348702 -46301594 + MurSAT1 Satellite Satellite 1 97 -23 7 1503 302 313 15 5 chrX 120349167 120349343 -46300953 + MurSAT1 Satellite Satellite 1 177 -2 7 1503 278 312 10 10 chrX 120349754 120349851 -46300445 + MurSAT1 Satellite Satellite 1 97 -23 7 1503 302 323 22 9 chrX 120350316 120350487 -46299809 + MurSAT1 Satellite Satellite 1 173 -2 7 1503 316 302 10 10 chrX 120350903 120351000 -46299296 + MurSAT1 Satellite Satellite 1 97 -23 7 1503 236 319 16 87 chrX 120351153 120351280 -46299016 + MurSAT1 Satellite Satellite 2 119 -1 7 1503 282 303 20 10 chrX 120351461 120351641 -46298655 + MurSAT1 Satellite Satellite 1 181 -2 7 1503 292 256 26 13 chrX 120352047 120352149 -46298147 + MurSAT1 Satellite Satellite 1 103 0 7 1503 263 358 14 0 chrX 120352618 120352785 -46297511 + MurSAT1 Satellite Satellite 1 169 -2 7 1503 233 371 0 0 chrX 120353201 120353298 -46296998 + MurSAT1 Satellite Satellite 1 97 -23 7 1503 243 308 13 13 chrX 120354171 120354250 -46296046 + MurSAT1 Satellite Satellite 2 80 -40 7 1503 286 265 80 29 chrX 120354269 120354412 -46295884 + MurSAT1 Satellite Satellite 1 150 -28 7 1503 253 259 0 0 chrX 120354675 120354733 -46295563 + MurSAT1 Satellite Satellite 35 92 -28 7 1503 261 163 0 0 chrX 120355071 120355114 -46295182 + MurSAT1 Satellite Satellite 50 92 -28 7 1503 268 278 19 19 chrX 120355373 120355495 -46294801 + MurSAT1 Satellite Satellite 1 122 -1 7 1503 294 326 11 11 chrX 120355818 120355948 -46294348 + MurSAT1 Satellite Satellite 1 130 -1 7 1503 257 317 9 9 chrX 120355984 120356089 -46294207 + MurSAT1 Satellite Satellite 6 110 -10 7 1503 293 362 0 0 chrX 120356708 120356832 -46293464 + MurSAT1 Satellite Satellite 1 124 -4 7 1503 372 289 22 22 chrX 120357236 120357523 -46292773 + MurSAT1 Satellite Satellite 1 287 -1 7 1503 285 355 9 9 chrX 120357735 120357941 -46292355 + MurSAT1 Satellite Satellite 1 206 -3 7 1503 290 282 6 6 chrX 120358299 120358408 -46291888 + MurSAT1 Satellite Satellite 1 109 0 7 1503 258 330 5 5 chrX 120358813 120358956 -46291340 + MurSAT1 Satellite Satellite 1 143 -2 7 1503 276 279 7 7 chrX 120359428 120359535 -46290761 + MurSAT1 Satellite Satellite 1 107 -19 7 1503 213 222 0 0 chrX 120362111 120362165 -46288131 + T-rich Low_complexity Low_complexity 1 54 0 7 1503 852 168 14 0 chrX 120362203 120362346 -46287950 + B1_Mus1 SINE Alu 4 148 0 7 1503 847 138 0 18 chrX 120362347 120362510 -46287786 + GA-rich Low_complexity Low_complexity 2 161 0 7 1503 360 0 0 0 chrX 120362560 120362600 -46287696 + (T)n Simple_repeat Simple_repeat 1 40 0 7 1503 228 291 11 39 chrX 120362656 120362835 -46287461 + T-rich Low_complexity Low_complexity 1 174 0 7 1503 923 129 14 0 chrX 120362891 120363030 -46287266 + B1_Mus1 SINE Alu 2 142 -6 7 1503 872 108 0 7 chrX 120363034 120363174 -46287122 + (GAAA)n Simple_repeat Simple_repeat 2 140 0 7 1503 839 175 7 0 chrX 120363495 120363632 -46286664 + B1_Mus1 SINE Alu 3 140 -8 7 1503 468 123 0 0 chrX 120363650 120363723 -46286573 + (GA)n Simple_repeat Simple_repeat 2 74 0 7 1503 26 0 0 0 chrX 120363756 120363782 -46286514 + AT_rich Low_complexity Low_complexity 1 26 0 7 1503 198 0 0 0 chrX 120363841 120363863 -46286433 + (T)n Simple_repeat Simple_repeat 1 22 0 7 1503 225 0 0 0 chrX 120364019 120364044 -46286252 + (T)n Simple_repeat Simple_repeat 1 25 0 7 1503 885 171 0 7 chrX 120364081 120364228 -46286068 + B1_Mus1 SINE Alu 3 148 0 7 1503 208 85 20 41 chrX 120364233 120364282 -46286014 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 7 1503 207 88 0 0 chrX 120364436 120364470 -46285826 + (T)n Simple_repeat Simple_repeat 1 34 0 7 1503 234 81 0 0 chrX 120364523 120364560 -46285736 + (T)n Simple_repeat Simple_repeat 1 37 0 7 1503 23 0 0 0 chrX 120364612 120364635 -46285661 + AT_rich Low_complexity Low_complexity 1 23 0 7 1503 891 171 7 0 chrX 120364669 120364815 -46285481 + B1_Mus1 SINE Alu 2 148 0 7 1503 709 186 12 12 chrX 120364815 120364978 -46285318 + GA-rich Low_complexity Low_complexity 2 164 0 7 1503 221 212 0 59 chrX 120365203 120365288 -46285008 + T-rich Low_complexity Low_complexity 3 82 0 7 1503 925 131 14 14 chrX 120365294 120365441 -46284855 + B1_Mus1 SINE Alu 2 148 0 7 1503 482 152 11 0 chrX 120365455 120365547 -46284749 + GA-rich Low_complexity Low_complexity 2 94 0 7 1503 1165 98 9 9 chrX 120365547 120365897 -46284399 + (GAAA)n Simple_repeat Simple_repeat 1 350 0 7 1503 834 153 22 14 chrX 120366219 120366358 -46283938 + B1_Mus1 SINE Alu 2 141 -7 7 1503 207 0 0 0 chrX 120366362 120366385 -46283911 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 7 1503 310 160 26 77 chrX 120366547 120366703 -46283593 + (TTA)n Simple_repeat Simple_repeat 3 150 0 7 1503 2983 27 0 45 chrX 120366961 120367314 -46282982 - IAPLTR1a_Mm LTR ERVK 0 337 1 7 1503 56375 21 18 6 chrX 120367314 120373710 -46276586 - IAPEz-int LTR ERVK 0 6481 8 7 1503 2983 27 0 45 chrX 120373710 120374063 -46276233 - IAPLTR1a_Mm LTR ERVK 0 337 1 7 1503 306 0 0 0 chrX 120374419 120374453 -46275843 + (TTA)n Simple_repeat Simple_repeat 1 34 0 7 1503 33 43 0 0 chrX 120374459 120374506 -46275790 + AT_rich Low_complexity Low_complexity 1 47 0 7 1503 324 70 0 0 chrX 120374618 120374661 -46275635 + (A)n Simple_repeat Simple_repeat 1 43 0 7 1503 24 96 0 0 chrX 120374751 120374824 -46275472 + AT_rich Low_complexity Low_complexity 1 73 0 7 1503 21 0 0 0 chrX 120374961 120374982 -46275314 + AT_rich Low_complexity Low_complexity 1 21 0 7 1503 21 0 0 0 chrX 120375006 120375027 -46275269 + AT_rich Low_complexity Low_complexity 1 21 0 7 1503 180 0 0 0 chrX 120375474 120375494 -46274802 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1503 180 0 0 0 chrX 120375699 120375719 -46274577 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1503 198 0 0 0 chrX 120375998 120376020 -46274276 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1503 236 143 0 67 chrX 120376299 120376374 -46273922 + A-rich Low_complexity Low_complexity 1 70 0 7 1503 216 0 0 0 chrX 120377161 120377185 -46273111 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1503 189 0 0 0 chrX 120377209 120377230 -46273066 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1503 396 0 0 0 chrX 120377521 120377565 -46272731 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 7 1503 210 37 0 0 chrX 120377600 120377627 -46272669 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 7 1503 21 0 0 0 chrX 120377734 120377755 -46272541 + AT_rich Low_complexity Low_complexity 1 21 0 7 1503 187 31 62 0 chrX 120377878 120377910 -46272386 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 1503 216 67 0 0 chrX 120378018 120378048 -46272248 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 7 1503 180 0 0 0 chrX 120378211 120378231 -46272065 + (TTA)n Simple_repeat Simple_repeat 2 21 0 7 1503 983 56 0 0 chrX 120378277 120378403 -46271893 + B1_Mus2 SINE Alu 12 137 -10 7 1503 380 20 0 20 chrX 120378403 120378453 -46271843 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 7 1503 216 145 0 127 chrX 120378456 120378535 -46271761 + T-rich Low_complexity Low_complexity 3 71 0 7 1503 297 0 0 0 chrX 120378544 120378577 -46271719 + (TTG)n Simple_repeat Simple_repeat 1 33 0 7 1503 22 0 0 0 chrX 120378577 120378599 -46271697 + AT_rich Low_complexity Low_complexity 1 22 0 7 1503 1152 79 0 0 chrX 120378634 120378774 -46271522 + B1_Mus1 SINE Alu 2 141 -7 7 1503 261 0 0 0 chrX 120378777 120378806 -46271490 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 7 1503 216 67 0 0 chrX 120379647 120379677 -46270619 + (A)n Simple_repeat Simple_repeat 1 30 0 7 1503 1236 48 7 0 chrX 120379980 120380125 -46270171 + B1_Mus2 SINE Alu 2 147 0 7 1503 185 108 0 26 chrX 120380349 120380387 -46269909 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 7 1503 1106 102 0 0 chrX 120380469 120380616 -46269680 + B1_Mus1 SINE Alu 2 148 0 7 1503 194 0 39 0 chrX 120380616 120380642 -46269654 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 7 1503 255 130 0 0 chrX 120380729 120380783 -46269513 + (T)n Simple_repeat Simple_repeat 1 54 0 7 1503 240 100 0 0 chrX 120380889 120380929 -46269367 + (A)n Simple_repeat Simple_repeat 1 40 0 7 1503 21 57 0 0 chrX 120380932 120380967 -46269329 + AT_rich Low_complexity Low_complexity 1 35 0 8 1503 222 37 0 0 chrX 120381147 120381174 -46269122 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 8 1503 235 0 57 0 chrX 120381293 120381328 -46268968 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 8 1503 180 0 0 0 chrX 120381391 120381411 -46268885 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 8 1503 318 67 0 0 chrX 120381681 120381726 -46268570 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 1503 189 0 0 0 chrX 120381843 120381864 -46268432 + (A)n Simple_repeat Simple_repeat 1 21 0 8 1503 234 0 0 0 chrX 120382898 120382924 -46267372 + (A)n Simple_repeat Simple_repeat 1 26 0 8 1503 22 0 0 0 chrX 120382975 120382997 -46267299 + AT_rich Low_complexity Low_complexity 1 22 0 8 1503 388 33 16 32 chrX 120383278 120383341 -46266955 + (CAAAAA)n Simple_repeat Simple_repeat 4 65 0 8 1503 205 51 25 25 chrX 120383447 120383487 -46266809 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 8 1503 3662 133 20 0 chrX 120385289 120385890 -46264406 + L1_Mur1 LINE L1 1429 2041 -3845 8 1503 2694 131 5 0 chrX 120386281 120386709 -46263587 + L1_Mur1 LINE L1 2086 2515 -3371 8 1503 1812 192 32 64 chrX 120386709 120387115 -46263181 + RLTR9C LTR ERVK 1 393 0 8 1503 311 255 10 60 chrX 120387124 120387224 -46263072 + MMETn-int LTR ERVK 10 104 -4740 8 1503 4109 193 29 86 chrX 120387259 120388385 -46261911 + MMETn-int LTR ERVK 108 1169 -3675 8 1503 2212 188 24 22 chrX 120388402 120388903 -46261393 + ETnERV2-int LTR ERVK 2496 2997 -4409 8 1503 891 158 0 18 chrX 120388903 120389071 -46261225 + RLTR13D1 LTR ERVK 486 650 -156 8 1503 3527 184 27 33 chrX 120389633 120391092 -46259204 + ETnERV2-int LTR ERVK 2357 4085 -3321 8 1503 2379 65 23 0 chrX 120391097 120391404 -46258892 - IAPLTR2b LTR ERVK -13 314 1 8 1503 12768 83 12 9 chrX 120391404 120393224 -46257072 - IAPEz-int LTR ERVK 0 6481 4656 8 1503 1773 75 4 0 chrX 120393223 120393462 -46256834 - IAPEY3-int LTR ERVK -5183 2497 2258 8 1503 379 105 0 0 chrX 120393467 120393524 -46256772 - B1_Mus1 SINE Alu -91 57 1 8 1503 4322 135 87 62 chrX 120393524 120394455 -46255841 - IAPEz-int LTR ERVK -5486 995 1 8 1503 2191 83 23 3 chrX 120394475 120394777 -46255519 - IAPLTR2b LTR ERVK -19 308 1 8 1503 1032 227 13 53 chrX 120394786 120395374 -46254922 + ETnERV2-int LTR ERVK 2901 3746 -1098 8 1503 422 118 0 26 chrX 120395584 120395662 -46254634 + ETnERV2-int LTR ERVK 7327 7402 -4 8 1503 1629 189 54 88 chrX 120395664 120396071 -46254225 + RLTR9C LTR ERVK 1 393 0 8 1503 11112 139 35 10 chrX 120396071 120397628 -46252668 + L1_Mur1 LINE L1 2510 4122 -1764 8 1503 402 21 0 0 chrX 120397628 120397675 -46252621 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1503 11112 139 35 10 chrX 120397675 120398257 -46252039 + L1_Mur1 LINE L1 4123 4702 -1184 8 1503 1813 147 3 10 chrX 120398259 120398562 -46251734 + RLTR22_Mus LTR ERVK 3 303 -1505 8 1503 559 64 0 0 chrX 120399094 120399172 -46251124 + RLTR22_Mus LTR ERVK 294 371 -1437 8 1503 8180 108 2 3 chrX 120399175 120401119 -46249177 - L1_Mus2 LINE L1 0 6566 4623 8 1503 2922 56 3 0 chrX 120401120 120401476 -46248820 - IAPEY2_LTR LTR ERVK 0 357 1 8 1503 3882 109 21 7 chrX 120401476 120402085 -46248211 - IAPEy-int LTR ERVK 0 7513 6896 8 1503 448 51 0 0 chrX 120402085 120402144 -46248152 - IAPEY3-int LTR ERVK -2770 4910 4852 8 1503 3121 92 11 0 chrX 120402137 120402584 -46247712 - IAPEY3-int LTR ERVK -4991 2689 2238 8 1503 8711 135 13 23 chrX 120402561 120404188 -46246108 - IAPEY3-int LTR ERVK -5698 1982 22 8 1503 2624 71 62 0 chrX 120404188 120404524 -46245772 - IAPEY2_LTR LTR ERVK 0 357 1 8 1503 13974 142 5 6 chrX 120404524 120407027 -46243269 - L1_Mus2 LINE L1 -1256 4627 2128 8 1503 404 91 0 0 chrX 120407032 120407098 -46243198 + L1_Mm LINE L1 3661 3726 -2157 8 1503 2050 116 291 0 chrX 120407107 120407480 -46242816 + RLTR22_Mus LTR ERVK 354 832 -1016 8 1503 180 0 0 0 chrX 120407480 120407500 -46242796 + (T)n Simple_repeat Simple_repeat 1 20 0 8 1503 275 153 81 27 chrX 120407658 120407679 -46242617 - PB1D9 SINE Alu -2 118 96 8 1503 1266 78 0 11 chrX 120407679 120407860 -46242436 + L1Md_F2 LINE L1 6392 6570 -12 8 1503 275 153 81 27 chrX 120407860 120407912 -46242384 - PB1D9 SINE Alu -25 95 41 8 1503 567 107 0 0 chrX 120407912 120407944 -46242352 - 4.5SRNA scRNA scRNA -4 90 7 8 1503 1072 42 0 0 chrX 120407944 120408086 -46242210 + L1_Mm LINE L1 3275 3416 -2467 8 1503 6626 150 24 45 chrX 120408086 120408340 -46241956 + Lx3A LINE L1 5770 6022 -959 8 1503 243 0 0 0 chrX 120408340 120408367 -46241929 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 8 1503 6626 150 24 45 chrX 120408367 120409344 -46240952 + Lx3A LINE L1 6023 6974 -7 8 1503 368 38 0 36 chrX 120409347 120409402 -46240894 + (TAAA)n Simple_repeat Simple_repeat 1 53 0 8 1503 614 13 13 0 chrX 120409451 120409526 -46240770 + (TC)n Simple_repeat Simple_repeat 1 76 0 8 1503 443 239 11 0 chrX 120410538 120410626 -46239670 + ID_B1 SINE B4 135 223 -1 8 1503 246 402 108 0 chrX 120410848 120410950 -46239346 + B3A SINE B2 69 181 -17 8 1503 225 0 0 0 chrX 120410952 120410977 -46239319 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 1503 709 325 19 9 chrX 120411307 120411518 -46238778 - ID_B1 SINE B4 -8 216 4 8 1503 760 265 36 27 chrX 120411605 120411826 -46238470 + MTD LTR MaLR 3 225 -194 8 1503 281 82 20 0 chrX 120411837 120411886 -46238410 + (CAAAAA)n Simple_repeat Simple_repeat 3 52 0 8 1503 362 368 20 20 chrX 120411902 120412049 -46238247 + RSINE1 SINE B4 4 150 -15 8 1503 501 17 0 0 chrX 120412055 120412113 -46238183 + (TAA)n Simple_repeat Simple_repeat 3 60 0 8 1503 678 319 35 103 chrX 120412276 120412646 -46237650 - MTE2a LTR MaLR -34 345 1 8 1503 1355 318 141 101 chrX 120412651 120413843 -46236453 - MTE2a-int LTR MaLR -137 1443 37 8 1503 290 298 181 20 chrX 120414044 120414393 -46235903 - Lx9 LINE L1 -15 7629 7225 8 1503 349 239 57 78 chrX 120414445 120414586 -46235710 - Lx9 LINE L1 -545 7099 6962 8 1503 8068 39 5 0 chrX 120414883 120415861 -46234435 + L1Md_A LINE L1 5599 6581 -1 8 1503 13579 47 5 14 chrX 120415861 120418621 -46231675 - L1Md_A LINE L1 -2920 2963 232 8 1503 1485 246 44 14 chrX 120419215 120419651 -46230645 - Lx2B LINE L1 -17 6983 6535 8 1503 791 158 26 7 chrX 120419653 120419806 -46230490 - Lx2B LINE L1 -689 6311 6156 8 1503 416 325 16 24 chrX 120419829 120419952 -46230344 - B3 SINE B2 -93 123 2 8 1503 1057 89 0 52 chrX 120420185 120420339 -46229957 + B1_Mm SINE Alu 2 147 0 8 1503 477 136 0 0 chrX 120420339 120420442 -46229854 + (A)n Simple_repeat Simple_repeat 1 103 0 8 1503 251 93 0 23 chrX 120420631 120420675 -46229621 + (TATG)n Simple_repeat Simple_repeat 4 46 0 8 1503 1110 258 56 85 chrX 120421494 120421884 -46228412 - ORR1C2 LTR MaLR 0 384 6 8 1503 801 175 0 0 chrX 120421896 120422050 -46228246 - Lx2 LINE L1 0 6997 6844 8 1503 1327 180 4 4 chrX 120422050 120422323 -46227973 + Lx2 LINE L1 5904 6176 -821 8 1503 380 63 32 0 chrX 120422400 120422463 -46227833 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 8 1503 291 122 0 0 chrX 120422535 120422584 -46227712 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 1503 540 301 37 0 chrX 120422608 120422744 -46227552 - RSINE1 SINE B4 -22 143 3 8 1503 354 45 0 0 chrX 120422860 120422904 -46227392 + (GGAA)n Simple_repeat Simple_repeat 2 45 0 8 1503 231 189 19 19 chrX 120422944 120422998 -46227298 + ORR1D2 LTR MaLR 1 54 -324 8 1503 840 271 97 94 chrX 120423032 120423374 -46226922 + ORR1D2 LTR MaLR 24 366 -4 8 1503 357 275 87 15 chrX 120423443 120423639 -46226657 + L1MD3 LINE L1 7773 7982 -13 8 1503 2319 269 30 25 chrX 120424337 120424466 -46225830 - RMER1B Other Other -4 1062 929 8 1503 1914 55 0 0 chrX 120424466 120424702 -46225594 + L1Md_F2 LINE L1 6328 6563 -19 8 1503 2319 279 35 40 chrX 120424702 120425590 -46224706 - RMER1B Other Other -138 928 106 8 1503 1125 263 18 21 chrX 120425593 120425873 -46224423 + ORR1B1 LTR MaLR 116 394 0 8 1503 1688 249 53 136 chrX 120425924 120426528 -46223768 - RLTR1D LTR ERV1 0 605 52 8 1503 930 121 81 0 chrX 120426721 120426861 -46223435 + Lx3C LINE L1 5889 6028 -948 8 1503 738 53 0 0 chrX 120426861 120426956 -46223340 + (GA)n Simple_repeat Simple_repeat 2 96 0 8 1503 930 121 81 0 chrX 120426956 120426988 -46223308 + Lx3C LINE L1 6029 6073 -903 8 1503 666 144 23 23 chrX 120426992 120427138 -46223158 + RMER17D2 LTR ERVK 703 906 0 8 1503 472 296 54 70 chrX 120428608 120428979 -46221317 + MuLV-int LTR ERV1 7095 7459 -147 8 1503 556 71 51 40 chrX 120429781 120429958 -46220338 + (CAAA)n Simple_repeat Simple_repeat 2 180 0 8 1503 2269 157 26 18 chrX 120429959 120430092 -46220204 + Lx3_Mus LINE L1 5783 5913 -1096 8 1503 237 33 0 0 chrX 120430092 120430122 -46220174 + (CAAAC)n Simple_repeat Simple_repeat 5 34 0 8 1503 2269 157 26 18 chrX 120430122 120430442 -46219854 + Lx3_Mus LINE L1 5914 6240 -769 8 1503 4720 113 11 1 chrX 120430438 120431183 -46219113 - L1_Mm LINE L1 -180 5703 4952 8 1503 316 309 0 0 chrX 120431279 120431360 -46218936 - ORR1D2 LTR MaLR -284 86 6 8 1503 913 288 96 32 chrX 120431679 120432062 -46218234 + MT2A LTR ERVL 1 528 -73 8 1503 498 17 0 0 chrX 120432067 120432126 -46218170 + (CA)n Simple_repeat Simple_repeat 2 60 0 8 1503 2192 213 50 16 chrX 120432268 120432769 -46217527 - Lx2B LINE L1 -6 6994 6477 8 1503 2144 180 9 15 chrX 120432760 120433217 -46217079 + L1_Mur1 LINE L1 5104 5557 -329 8 1503 6533 95 4 10 chrX 120433228 120434528 -46215768 - L1Md_F2 LINE L1 0 6582 5294 8 1503 2088 71 0 7 chrX 120434528 120434811 -46215485 - L1Md_F2 LINE L1 -2 6580 6300 8 1503 6684 91 6 4 chrX 120434811 120435897 -46214399 - L1Md_F LINE L1 -4498 1385 294 8 1503 530 253 32 48 chrX 120435890 120435957 -46214339 + Lx2B LINE L1 5535 5597 -280 8 1503 3442 30 2 0 chrX 120435957 120436352 -46213944 - MTA_Mm LTR MaLR 0 396 1 8 1503 9185 36 2 1 chrX 120436352 120437449 -46212847 - MTA_Mm-int LTR MaLR 0 1098 1 8 1503 3429 33 2 0 chrX 120437449 120437844 -46212452 - MTA_Mm LTR MaLR 0 396 1 8 1503 530 253 32 48 chrX 120437844 120437961 -46212335 + Lx2B LINE L1 5598 5716 -161 8 1503 345 184 68 120 chrX 120437962 120438079 -46212217 + MT2B LTR ERVL 154 264 -337 8 1503 650 111 0 39 chrX 120438013 120438105 -46212191 + B1_Mus2 SINE Alu 47 138 -9 8 1503 229 26 26 26 chrX 120438105 120438144 -46212152 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 1503 2390 165 11 52 chrX 120438164 120438700 -46211596 + Lx2B LINE L1 5769 6282 -718 8 1503 336 303 30 10 chrX 120438895 120438995 -46211301 + RSINE1 SINE B4 56 157 -8 8 1503 281 156 0 0 chrX 120439053 120439098 -46211198 - L1_Mur3 LINE L1 -2356 3524 3480 8 1503 2670 68 3 0 chrX 120439295 120439648 -46210648 - RLTR13A LTR ERVK -501 354 1 8 1503 7684 107 8 1 chrX 120440336 120441940 -46208356 - L1_Mus2 LINE L1 -297 6269 4652 8 1503 348 300 124 32 chrX 120442069 120442472 -46207824 + Charlie2a DNA MER1_type 1858 2297 -564 8 1503 459 229 0 0 chrX 120442479 120442596 -46207700 + T-rich Low_complexity Low_complexity 15 131 0 8 1503 1137 88 0 0 chrX 120442596 120442744 -46207552 - B1_Mus1 SINE Alu 0 148 1 8 1503 459 229 0 0 chrX 120442744 120442757 -46207539 + T-rich Low_complexity Low_complexity 2 14 0 8 1503 373 297 90 36 chrX 120442880 120442991 -46207305 + Charlie2a DNA MER1_type 2476 2591 -270 8 1503 4182 123 122 3 chrX 120442991 120443685 -46206611 - L1_Mus3 LINE L1 -4 6634 5858 8 1503 405 297 90 36 chrX 120443685 120443908 -46206388 + Charlie2a DNA MER1_type 2592 2828 -33 8 1503 559 344 12 0 chrX 120443913 120444073 -46206223 + B3 SINE B2 5 166 -50 8 1503 441 0 0 0 chrX 120444073 120444122 -46206174 + (CA)n Simple_repeat Simple_repeat 1 49 0 8 1503 403 99 0 0 chrX 120444176 120444247 -46206049 - L1_Mus3 LINE L1 -4 6634 6564 8 1503 7430 61 9 6 chrX 120444247 120445251 -46205045 + MTA_Mm-int LTR MaLR 92 1098 0 8 1503 3038 38 67 0 chrX 120445251 120445622 -46204674 + MTA_Mm LTR MaLR 1 396 0 8 1503 4136 190 2 6 chrX 120445649 120446449 -46203847 - L1_Mus3 LINE L1 -526 5357 4561 8 1503 2704 156 2 31 chrX 120446447 120446935 -46203361 + L1_Mus3 LINE L1 5365 5782 -101 8 1503 951 109 0 14 chrX 120446935 120447075 -46203221 - B1_Mm SINE Alu -9 138 1 8 1503 5730 121 3 11 chrX 120447075 120447962 -46202334 + L1_Mus3 LINE L1 5771 6626 -12 8 1503 1276 206 50 104 chrX 120447971 120448721 -46201575 + RMER17C-int LTR ERVK 1946 2441 -797 9 187 41241 8 0 1 chrX 120448723 120455721 -46194575 - L1Md_A LINE L1 0 6582 1 9 1504 2716 211 71 49 chrX 120455737 120456515 -46193781 + RMER17C-int LTR ERVK 2444 3238 0 9 1504 260 264 68 140 chrX 120456515 120456779 -46193517 + RMER17C LTR ERVK 2 246 -164 9 1504 326 287 0 22 chrX 120456944 120457033 -46193263 + B4A SINE B4 206 292 0 9 1504 1024 336 34 48 chrX 120457127 120457747 -46192549 + RMER15-int LTR ERVL 1145 1755 -3244 9 1504 634 342 53 11 chrX 120457762 120458120 -46192176 + MTE2b LTR MaLR 5 377 -2 9 1504 585 321 10 25 chrX 120458128 120458329 -46191967 + MTE2b-int LTR MaLR 6 203 -1377 9 1504 1359 298 20 15 chrX 120458337 120458742 -46191554 - MTD LTR MaLR -12 407 1 9 1504 503 335 27 5 chrX 120458747 120458933 -46191363 + MTE2b-int LTR MaLR 213 402 -1178 9 1504 756 323 66 16 chrX 120458949 120459254 -46191042 + MTE2b-int LTR MaLR 553 872 -708 9 1504 740 325 55 45 chrX 120459305 120459617 -46190679 + ORR1D2 LTR MaLR 1 315 -55 9 1504 278 316 46 134 chrX 120459619 120459813 -46190483 - RLTR24 LTR ERV1 -75 454 278 9 1504 3223 196 52 49 chrX 120459814 120460994 -46189302 + Lx5 LINE L1 5176 6380 -670 9 1504 451 148 11 79 chrX 120461006 120461095 -46189201 - RMER19A LTR ERVK -27 710 636 9 1504 1612 295 107 42 chrX 120461240 120461840 -46188456 + ORR1D2-int LTR MaLR 50 657 -713 9 1504 531 0 0 0 chrX 120461840 120461899 -46188397 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 9 1504 1612 295 107 42 chrX 120461899 120462027 -46188269 + ORR1D2-int LTR MaLR 658 824 -546 9 1504 216 0 0 0 chrX 120462146 120462170 -46188126 + (A)n Simple_repeat Simple_repeat 1 24 0 9 1504 1114 247 149 42 chrX 120462510 120462983 -46187313 + ORR1D2-int LTR MaLR 825 1347 -23 9 1504 3402 195 13 90 chrX 120464558 120465328 -46184968 + RMER6D LTR ERVK 1 711 -9 9 1504 277 293 7 29 chrX 120466071 120466208 -46184088 + GA-rich Low_complexity Low_complexity 2 135 0 9 1504 336 143 0 0 chrX 120466255 120466311 -46183985 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 9 1504 2186 209 104 8 chrX 120466812 120467343 -46182953 - Lx3C LINE L1 -5 6971 6390 9 1504 3879 152 13 10 chrX 120467348 120468019 -46182277 - L1_Mus3 LINE L1 0 6638 5966 9 1504 11272 168 50 3 chrX 120468025 120470367 -46179929 + L1_Mus3 LINE L1 3466 5940 -698 9 1504 12944 168 26 17 chrX 120470365 120473386 -46176910 - Lx3C LINE L1 -568 6408 3363 9 1504 524 328 74 31 chrX 120473387 120473711 -46176585 + ORR1D2-int LTR MaLR 1243 1580 0 9 1504 935 315 15 11 chrX 120473799 120474059 -46176237 + MTE2b LTR MaLR 119 379 0 9 1504 737 372 0 75 chrX 120474312 120474424 -46175872 + B4A SINE B4 11 117 -175 9 1504 1134 58 0 13 chrX 120474424 120474580 -46175716 - L1Md_F2 LINE L1 -13 6569 6416 9 1504 737 372 0 75 chrX 120474580 120474772 -46175524 + B4A SINE B4 118 292 0 9 1504 265 399 25 0 chrX 120474793 120474951 -46175345 + RMER15-int LTR ERVL 2002 2163 -2836 9 1504 757 285 28 0 chrX 120475263 120475477 -46174819 - URR1B DNA MER1_type -4 221 2 9 1504 986 354 50 44 chrX 120475477 120476205 -46174091 + RMER15-int LTR ERVL 4261 4992 -7 9 1504 481 353 98 35 chrX 120476839 120477177 -46173119 - L2a LINE L2 -84 3342 2984 9 1504 199 372 19 10 chrX 120477325 120477428 -46172868 - L2a LINE L2 -949 2470 2367 9 1504 252 114 0 0 chrX 120477709 120477744 -46172552 - L1_Mur1 LINE L1 -315 5571 5537 9 1504 320 300 8 15 chrX 120477839 120477971 -46172325 + GA-rich Low_complexity Low_complexity 1 131 0 9 1504 334 297 0 35 chrX 120478002 120478145 -46172151 + GA-rich Low_complexity Low_complexity 2 139 0 9 1504 266 328 22 22 chrX 120478258 120478436 -46171860 + CT-rich Low_complexity Low_complexity 2 179 0 9 1504 203 348 0 27 chrX 120478515 120478698 -46171598 + CT-rich Low_complexity Low_complexity 2 179 0 9 1504 336 314 6 25 chrX 120478993 120479156 -46171140 + GA-rich Low_complexity Low_complexity 2 161 0 9 1504 816 92 0 0 chrX 120479156 120479275 -46171021 + (GAAA)n Simple_repeat Simple_repeat 3 121 0 9 1504 208 250 0 30 chrX 120479416 120479482 -46170814 + CT-rich Low_complexity Low_complexity 1 64 0 9 1504 195 186 0 0 chrX 120479509 120479552 -46170744 + CT-rich Low_complexity Low_complexity 2 44 0 9 1504 334 330 0 29 chrX 120479865 120480101 -46170195 + CT-rich Low_complexity Low_complexity 1 229 0 9 1504 562 95 10 10 chrX 120480113 120480209 -46170087 + (TA)n Simple_repeat Simple_repeat 2 97 0 9 1504 228 86 0 0 chrX 120480209 120480243 -46170053 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 1504 450 327 0 6 chrX 120480248 120480411 -46169885 + CT-rich Low_complexity Low_complexity 1 162 0 9 1504 365 350 9 12 chrX 120480625 120480968 -46169328 + GA-rich Low_complexity Low_complexity 1 342 0 9 1504 277 289 14 24 chrX 120481285 120481502 -46168794 + GA-rich Low_complexity Low_complexity 1 214 0 9 1504 329 324 84 21 chrX 120481611 120481753 -46168543 - HAL1-3A_ME LINE L1 -417 2441 2291 9 1504 311 345 14 20 chrX 120481759 120482067 -46168229 + CT-rich Low_complexity Low_complexity 1 306 0 9 1504 568 38 0 25 chrX 120482106 120482187 -46168109 + (TC)n Simple_repeat Simple_repeat 2 80 0 9 1504 40953 8 1 6 chrX 120482277 120488620 -46161676 - L1Md_A LINE L1 0 6582 275 9 1504 340 339 3 19 chrX 120488638 120488824 -46161472 + CT-rich Low_complexity Low_complexity 1 183 0 9 1504 274 354 3 26 chrX 120488962 120489188 -46161108 + GA-rich Low_complexity Low_complexity 1 220 0 9 1504 218 185 12 36 chrX 120489215 120489299 -46160997 + GA-rich Low_complexity Low_complexity 5 86 0 9 1504 384 230 21 32 chrX 120489337 120489621 -46160675 + GA-rich Low_complexity Low_complexity 1 280 0 9 1504 216 264 17 17 chrX 120489687 120489864 -46160432 + GA-rich Low_complexity Low_complexity 1 177 0 9 1504 222 240 0 20 chrX 120490654 120490705 -46159591 + PB1 SINE Alu 75 124 -3 9 1504 459 0 0 0 chrX 120491119 120491170 -46159126 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 1504 209 143 0 35 chrX 120492501 120492559 -46157737 + T-rich Low_complexity Low_complexity 5 60 0 9 1504 238 146 20 40 chrX 120492648 120492698 -46157598 - MT2B2 LTR ERVL 0 584 536 9 1504 667 78 19 0 chrX 120492712 120492815 -46157481 + (TC)n Simple_repeat Simple_repeat 2 106 0 9 1504 6654 114 6 1 chrX 120492877 120493851 -46156445 + L1_Mus3 LINE L1 5657 6635 -3 9 1504 196 91 22 22 chrX 120493964 120494009 -46156287 + (CA)n Simple_repeat Simple_repeat 2 46 0 9 1504 737 313 0 30 chrX 120494695 120494896 -46155400 + B3 SINE B2 17 211 -5 9 1504 524 151 10 31 chrX 120495090 120495186 -46155110 + RLTR9C LTR ERVK 300 393 0 9 1504 317 255 19 56 chrX 120495187 120495295 -46155001 + MMETn-int LTR ERVK 1 104 -4740 9 1504 502 242 35 88 chrX 120495330 120495557 -46154739 + MMETn-int LTR ERVK 108 322 -4522 9 1504 3251 188 77 71 chrX 120495530 120496466 -46153830 + MMETn-int LTR ERVK 364 1631 -5775 9 1504 2230 198 22 37 chrX 120496493 120497003 -46153293 + MMETn-int LTR ERVK 2496 2997 -4409 9 1504 894 152 0 18 chrX 120497003 120497171 -46153125 + RLTR13D1 LTR ERVK 486 650 -156 9 1504 3575 187 31 34 chrX 120497736 120499203 -46151093 + ETnERV2-int LTR ERVK 2357 4085 -3321 9 1504 445 118 0 26 chrX 120499282 120499360 -46150936 + ETnERV2-int LTR ERVK 7327 7402 -4 9 1504 1576 208 32 66 chrX 120499369 120499776 -46150520 + RLTR9C LTR ERVK 1 393 0 9 1504 1325 107 19 5 chrX 120499776 120499992 -46150304 + L1_Mur1 LINE L1 2510 2728 -3158 9 1504 5614 147 59 6 chrX 120500000 120501071 -46149225 + L1_Mur1 LINE L1 2738 3865 -2021 1 1504 1006 151 0 10 chrX 120501069 120501263 -46149033 + L1_Mur1 LINE L1 4511 4702 -1184 1 1504 2282 127 22 6 chrX 120501265 120501628 -46148668 + RLTR22_Mus LTR ERVK 3 371 -1437 2 1504 16828 116 3 6 chrX 120501635 120504979 -46145317 - L1_Mus2 LINE L1 0 6566 3236 3 1504 2976 48 3 0 chrX 120504979 120505361 -46144935 - L1Md_F2 LINE L1 -643 5939 5551 4 1504 5048 71 0 6 chrX 120505362 120506030 -46144266 + L1Md_F2 LINE L1 5907 6570 -12 4 1504 585 95 0 0 chrX 120506030 120506114 -46144182 - 4.5SRNA scRNA scRNA -4 90 7 5 1504 1090 50 0 0 chrX 120506114 120506255 -46144041 + L1_Mm LINE L1 3275 3415 -2468 6 1504 6974 141 12 37 chrX 120506255 120507493 -46142803 + Lx3A LINE L1 5769 6975 -6 7 1504 212 54 0 51 chrX 120507496 120507535 -46142761 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 8 1504 612 0 0 0 chrX 120507585 120507653 -46142643 + (TC)n Simple_repeat Simple_repeat 2 69 0 9 1504 452 225 11 0 chrX 120508672 120508761 -46141535 + ID_B1 SINE B4 135 224 0 1 1504 309 331 216 13 chrX 120508932 120509075 -46141221 + B3A SINE B2 8 183 -15 1 1504 330 26 0 0 chrX 120509075 120509114 -46141182 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1504 646 311 19 9 chrX 120509445 120509656 -46140640 - ID_B1 SINE B4 -8 216 4 1 1504 1499 275 30 17 chrX 120509743 120510150 -46140146 + MTD LTR MaLR 3 414 -5 1 1504 280 310 26 26 chrX 120510241 120510357 -46139939 + PB1D10 SINE Alu 2 117 0 1 1504 255 31 0 0 chrX 120510357 120510389 -46139907 + (CAAAAA)n Simple_repeat Simple_repeat 1 32 0 1 1504 387 341 15 23 chrX 120510407 120510539 -46139757 + RSINE1 SINE B4 4 134 -31 1 1504 214 29 0 54 chrX 120510561 120510598 -46139698 + (TAA)n Simple_repeat Simple_repeat 3 37 0 1 1504 2030 74 31 16 chrX 120510883 120511200 -46139096 + RLTRETN_Mm LTR ERVK 1 322 0 1 1504 25919 78 16 14 chrX 120511200 120517609 -46132687 + MMETn-int LTR ERVK 1 7124 -282 1 1504 2030 74 31 16 chrX 120517609 120517926 -46132370 + RLTRETN_Mm LTR ERVK 1 322 0 1 1504 421 287 36 149 chrX 120517954 120518175 -46132121 - MTE2a LTR MaLR -183 196 1 2 1504 1571 321 153 40 chrX 120518176 120518928 -46131368 - MTE2a-int LTR MaLR -1 1579 743 2 1504 1033 320 39 29 chrX 120518903 120519373 -46130923 - MTE2a-int LTR MaLR -946 634 37 2 1504 26 30 0 0 chrX 120519552 120519585 -46130711 + AT_rich Low_complexity Low_complexity 1 33 0 2 1504 378 42 0 0 chrX 120519686 120519734 -46130562 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1504 289 332 63 19 chrX 120519751 120519957 -46130339 - Lx9 LINE L1 -205 7439 7225 2 1504 426 244 35 78 chrX 120520011 120520153 -46130143 - Lx9 LINE L1 -547 7097 6962 2 1504 198 0 0 0 chrX 120520714 120520736 -46129560 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 2 1504 2897 50 53 3 chrX 120521007 120521384 -46128912 + MTA_Mm LTR MaLR 1 396 0 2 1504 246 128 0 0 chrX 120521797 120521836 -46128460 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 1504 316 227 27 0 chrX 120521904 120521979 -46128317 + HAL1-3A_ME LINE L1 1973 2049 -809 2 1504 553 271 158 47 chrX 120521996 120522294 -46128002 - Lx7 LINE L1 -330 7366 7036 2 1504 328 250 0 32 chrX 120523203 120523298 -46126998 - RNLTR23 LTR ERVK 0 642 551 2 1504 276 127 0 0 chrX 120523298 120523353 -46126943 + (A)n Simple_repeat Simple_repeat 1 55 0 3 1504 22 0 0 0 chrX 120523743 120523765 -46126531 + AT_rich Low_complexity Low_complexity 1 22 0 3 1504 4526 111 5 99 chrX 120524171 120525011 -46125285 + L1Md_F LINE L1 360 1120 -5399 3 1504 4783 61 0 5 chrX 120525014 120525636 -46124660 + L1Md_F2 LINE L1 5963 6581 -1 3 1504 1525 229 65 31 chrX 120525856 120526302 -46123994 - Lx2B LINE L1 -5 6995 6535 3 1504 803 167 26 7 chrX 120526306 120526457 -46123839 - Lx2B LINE L1 -691 6309 6156 3 1504 380 342 16 24 chrX 120526480 120526603 -46123693 - B3 SINE B2 -93 123 2 3 1504 1147 89 0 0 chrX 120526836 120526982 -46123314 + B1_Mm SINE Alu 2 147 0 3 1504 186 133 0 0 chrX 120526982 120527012 -46123284 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1504 227 103 0 25 chrX 120527211 120527251 -46123045 + (TATG)n Simple_repeat Simple_repeat 4 42 0 3 1504 1151 254 57 83 chrX 120528072 120528459 -46121837 - ORR1C2 LTR MaLR 0 384 8 3 1504 731 182 0 7 chrX 120528475 120528630 -46121666 - Lx2 LINE L1 0 6997 6844 4 1504 1831 189 5 10 chrX 120528630 120529016 -46121280 + Lx2 LINE L1 5904 6287 -710 4 1504 207 125 0 0 chrX 120529052 120529092 -46121204 + (TCTCTG)n Simple_repeat Simple_repeat 2 41 0 4 1504 212 233 0 0 chrX 120529092 120529135 -46121161 + CT-rich Low_complexity Low_complexity 1 43 0 4 1504 450 36 0 0 chrX 120529156 120529212 -46121084 + (TGG)n Simple_repeat Simple_repeat 1 56 0 4 1504 465 279 28 132 chrX 120529218 120529400 -46120896 - RSINE1 SINE B4 0 165 3 4 1504 465 50 0 0 chrX 120529516 120529576 -46120720 + (GGAA)n Simple_repeat Simple_repeat 2 61 0 4 1504 902 252 144 48 chrX 120529704 120529956 -46120340 + ORR1D2 LTR MaLR 24 304 -66 4 1504 188 0 74 0 chrX 120529956 120529983 -46120313 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 4 1504 902 252 144 48 chrX 120529983 120530043 -46120253 + ORR1D2 LTR MaLR 305 366 -4 4 1504 431 275 84 15 chrX 120530115 120530318 -46119978 + L1MD3 LINE L1 7766 7982 -13 4 1504 207 69 0 0 chrX 120530927 120530956 -46119340 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1504 2651 278 67 18 chrX 120531221 120532207 -46118089 - RMER1B Other Other -4 1062 25 5 1504 1133 263 18 21 chrX 120532210 120532490 -46117806 + ORR1B1 LTR MaLR 116 394 0 5 1504 983 121 81 0 chrX 120532713 120532853 -46117443 + Lx3C LINE L1 5889 6028 -948 5 1504 774 32 0 0 chrX 120532853 120532946 -46117350 + (GA)n Simple_repeat Simple_repeat 2 94 0 5 1504 983 121 81 0 chrX 120532946 120532978 -46117318 + Lx3C LINE L1 6029 6073 -903 5 1504 655 141 30 21 chrX 120532982 120533127 -46117169 + RMER17D2 LTR ERVK 703 906 0 5 1504 701 312 45 37 chrX 120534456 120534985 -46115311 + RLTR6-int LTR ERV1 7158 7640 -138 5 1504 180 0 0 0 chrX 120535641 120535661 -46114635 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1504 312 171 0 0 chrX 120535754 120535836 -46114460 + A-rich Low_complexity Low_complexity 4 85 0 5 1504 2450 153 26 26 chrX 120535836 120535969 -46114327 + Lx3_Mus LINE L1 5784 5910 -1099 5 1504 216 0 0 0 chrX 120535969 120535993 -46114303 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 6 1504 2450 153 26 26 chrX 120535993 120536316 -46113980 + Lx3_Mus LINE L1 5911 6240 -769 5 1504 5096 110 7 1 chrX 120536312 120537056 -46113240 - L1_Mm LINE L1 -180 5703 4956 6 1504 297 321 0 0 chrX 120537159 120537240 -46113056 - ORR1D2 LTR MaLR -284 86 6 6 1504 921 276 99 50 chrX 120537559 120537947 -46112349 + MT2A LTR ERVL 1 530 -54 6 1504 441 0 0 0 chrX 120537947 120537996 -46112300 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1504 238 310 113 141 chrX 120537996 120538041 -46112255 + MT2A LTR ERVL 531 582 -2 6 1504 2476 195 52 16 chrX 120538141 120538641 -46111655 - Lx2B LINE L1 -6 6994 6477 6 1504 2815 212 16 11 chrX 120538632 120539247 -46111049 + Lx2B LINE L1 5104 5721 -165 6 1504 288 202 76 119 chrX 120539251 120539369 -46110927 + MT2B LTR ERVL 152 264 -337 6 1504 662 147 0 0 chrX 120539302 120539404 -46110892 + B1_Mus2 SINE Alu 46 147 0 6 1504 328 16 48 32 chrX 120539405 120539468 -46110828 + (CAAAAA)n Simple_repeat Simple_repeat 3 66 0 6 1504 180 97 0 0 chrX 120539508 120539539 -46110757 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1504 2452 161 16 35 chrX 120539539 120540027 -46110269 + Lx2B LINE L1 5804 6282 -718 6 1504 276 356 11 0 chrX 120540232 120540319 -46109977 + RSINE1 SINE B4 68 155 -10 7 1504 256 200 0 0 chrX 120540377 120540422 -46109874 - L1_Mur3 LINE L1 -2356 3524 3480 7 1504 300 261 59 44 chrX 120540480 120540616 -46109680 - L1M2 LINE L1 -2692 3451 3314 7 1504 2636 74 3 0 chrX 120540617 120540970 -46109326 - RLTR13A LTR ERVK -501 354 1 7 1504 299 346 52 8 chrX 120541945 120542079 -46108217 - HAL1 LINE L1 -2198 309 170 7 1504 21 36 0 0 chrX 120542184 120542212 -46108084 + AT_rich Low_complexity Low_complexity 1 28 0 7 1504 757 247 7 23 chrX 120542245 120542443 -46107853 + RLTR20B3 LTR ERVK 1 231 -346 7 1504 1256 274 84 20 chrX 120542674 120543017 -46107279 - ORR1D1 LTR MaLR -1 373 9 7 1504 261 250 7 66 chrX 120543085 120543172 -46107124 + MTE2a LTR MaLR 3 82 -337 7 1504 1054 103 0 0 chrX 120543172 120543318 -46106978 + B1_Mm SINE Alu 2 147 0 8 1504 371 279 18 97 chrX 120543318 120543459 -46106837 + MTE2a LTR MaLR 68 169 -210 7 1504 6976 57 2 3 chrX 120543470 120544369 -46105927 + L1Md_F3 LINE L1 5673 6570 -14 8 1504 283 337 11 0 chrX 120544481 120544570 -46105726 + MTE2a LTR MaLR 318 407 -14 7 1504 733 314 13 13 chrX 120545073 120545448 -46104848 + Lx5 LINE L1 888 1262 -6466 8 1504 1059 272 118 82 chrX 120545453 120546254 -46104042 + RLTR22_Mur LTR ERVK 5 802 -1046 8 1504 374 322 20 27 chrX 120546400 120546547 -46103749 + RLTR22_Mur LTR ERVK 1104 1249 -73 8 1504 5078 248 38 96 chrX 120546547 120551038 -46099258 + Lx5 LINE L1 2890 7031 -19 8 1504 535 278 25 106 chrX 120551036 120551417 -46098879 - Lx7 LINE L1 -29 7667 7318 8 1504 2173 115 16 3 chrX 120551417 120551740 -46098556 - ORR1A2 LTR MaLR 0 327 1 8 1504 535 278 25 106 chrX 120551740 120551753 -46098543 - Lx7 LINE L1 -379 7317 7305 8 1504 1882 193 12 0 chrX 120551748 120552090 -46098206 + Lx7 LINE L1 6657 7002 -694 8 1504 547 244 7 51 chrX 120552205 120552343 -46097953 - MT2A LTR ERVL -401 132 1 8 1504 433 146 73 0 chrX 120552343 120552425 -46097871 - MERVL_2A-int LTR ERVL 0 5761 5674 8 1504 2902 253 45 15 chrX 120552547 120553298 -46096998 - ORR1D-int LTR MaLR -142 1228 455 8 1504 414 297 45 22 chrX 120553307 120553582 -46096714 + Lx8 LINE L1 5401 5670 -177 8 1504 484 320 20 10 chrX 120553928 120554127 -46096169 + Lx8 LINE L1 6332 6532 -941 8 1504 4988 95 15 12 chrX 120554528 120555924 -46094372 - L1Md_F LINE L1 -3979 1904 505 9 1504 591 158 85 0 chrX 120555953 120556067 -46094229 + L1Md_T LINE L1 5545 5685 -897 9 1504 4319 60 0 2 chrX 120556070 120556620 -46093676 - L1Md_F3 LINE L1 -2 6582 6034 9 1504 3395 46 2 0 chrX 120556620 120557094 -46093202 + L1Md_F3 LINE L1 5548 6022 -562 9 1504 5819 110 3 2 chrX 120557095 120557987 -46092309 + L1_Mus2 LINE L1 5674 6566 0 9 1504 900 211 41 24 chrX 120557991 120558282 -46092014 + L1_Mur3 LINE L1 2992 3287 -2593 9 1504 750 259 25 28 chrX 120558302 120558584 -46091712 + Lx7 LINE L1 5620 5900 -1796 9 1504 2065 202 24 31 chrX 120558587 120558827 -46091469 + MTC LTR MaLR 1 237 -184 9 1504 6379 101 6 1 chrX 120558827 120559716 -46090580 - RLTR13B1 LTR ERVK 0 893 1 9 1504 2065 202 24 31 chrX 120559716 120559899 -46090397 + MTC LTR MaLR 238 421 0 9 1504 327 319 40 49 chrX 120559905 120560129 -46090167 + Lx6 LINE L1 5905 6126 -1334 9 1504 260 290 0 39 chrX 120560124 120560253 -46090043 + Lx6 LINE L1 7322 7445 -15 9 1504 1348 218 20 78 chrX 120560619 120560963 -46089333 + RLTR21 LTR ERVK 1 324 -1248 9 1504 2038 211 57 76 chrX 120560998 120561592 -46088704 + RLTR21 LTR ERVK 550 1130 -442 9 1504 369 0 0 0 chrX 120561592 120561633 -46088663 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1504 2038 211 57 76 chrX 120561633 120561706 -46088590 + RLTR21 LTR ERVK 1131 1204 -368 9 1504 552 246 59 18 chrX 120561771 120561941 -46088355 - ORR1B2 LTR MaLR -190 177 1 1 1504 252 239 0 14 chrX 120561976 120562048 -46088248 + GA-rich Low_complexity Low_complexity 1 71 0 1 1504 409 115 11 11 chrX 120562051 120562139 -46088157 + (CATA)n Simple_repeat Simple_repeat 1 88 0 1 1504 548 175 210 19 chrX 120566735 120566892 -46083404 + B2_Mm2 SINE B2 1 187 -8 1 1504 1063 36 0 14 chrX 120566892 120567034 -46083262 + (GGAA)n Simple_repeat Simple_repeat 1 140 0 1 1504 1266 41 11 11 chrX 120567043 120567217 -46083079 + (GAAA)n Simple_repeat Simple_repeat 4 177 0 1 1504 2835 127 7 0 chrX 120567978 120568411 -46081885 - L1_Mus3 LINE L1 -6 6632 6197 1 1504 236 0 0 81 chrX 120568581 120568618 -46081678 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1504 256 326 9 9 chrX 120574730 120574862 -46075434 + MurSAT1 Satellite Satellite 1 132 -3 1 1504 228 315 35 35 chrX 120575269 120575384 -46074912 + MurSAT1 Satellite Satellite 1 115 -5 1 1504 320 331 8 8 chrX 120575424 120575628 -46074668 + MurSAT1 Satellite Satellite 1 204 -2 1 1504 283 278 20 15 chrX 120575830 120575973 -46074323 + MurSAT1 Satellite Satellite 1 143 -2 1 1504 338 289 0 0 chrX 120576304 120576401 -46073895 + MurSAT1 Satellite Satellite 1 97 -23 1 1504 248 309 36 9 chrX 120576920 120577031 -46073265 + MurSAT1 Satellite Satellite 5 118 -2 1 1504 284 313 15 5 chrX 120578024 120578200 -46072096 + MurSAT1 Satellite Satellite 1 177 -2 1 1504 279 250 13 13 chrX 120578610 120578708 -46071588 + MurSAT1 Satellite Satellite 1 98 0 1 1504 239 286 35 12 chrX 120579264 120579349 -46070947 + MurSAT1 Satellite Satellite 7 93 -27 1 1504 281 320 0 0 chrX 120579760 120579857 -46070439 + MurSAT1 Satellite Satellite 1 97 -23 1 1504 283 297 15 5 chrX 120580326 120580498 -46069798 + MurSAT1 Satellite Satellite 1 173 -2 1 1504 270 302 10 10 chrX 120580909 120581006 -46069290 + MurSAT1 Satellite Satellite 1 97 -23 1 1504 247 286 35 12 chrX 120581562 120581647 -46068649 + MurSAT1 Satellite Satellite 7 93 -27 1 1504 283 292 10 10 chrX 120582058 120582155 -46068141 + MurSAT1 Satellite Satellite 1 97 -23 1 1504 271 274 35 12 chrX 120582711 120582796 -46067500 + MurSAT1 Satellite Satellite 7 93 -27 1 1504 230 323 10 10 chrX 120583207 120583304 -46066992 + MurSAT1 Satellite Satellite 1 97 -23 1 1504 281 302 10 10 chrX 120584356 120584453 -46065843 + MurSAT1 Satellite Satellite 1 97 -23 1 1504 247 286 35 12 chrX 120585009 120585094 -46065202 + MurSAT1 Satellite Satellite 7 93 -27 1 1504 285 292 10 10 chrX 120585505 120585602 -46064694 + MurSAT1 Satellite Satellite 1 97 -23 1 23 271 274 35 12 chrX 120586158 120586243 -46064053 + MurSAT1 Satellite Satellite 7 93 -27 1 1505 274 302 10 10 chrX 120587803 120587900 -46062396 + MurSAT1 Satellite Satellite 1 97 -23 1 1505 265 321 15 5 chrX 120588361 120588541 -46061755 + MurSAT1 Satellite Satellite 1 181 -2 1 1505 297 292 10 10 chrX 120588952 120589049 -46061247 + MurSAT1 Satellite Satellite 1 97 -23 1 1505 246 340 14 0 chrX 120589514 120589685 -46060611 + MurSAT1 Satellite Satellite 1 173 -22 1 1505 233 350 0 0 chrX 120590101 120590198 -46060098 + MurSAT1 Satellite Satellite 1 97 -23 1 1505 247 231 0 0 chrX 120591200 120591252 -46059044 + MurSAT1 Satellite Satellite 41 92 -28 1 1505 236 186 0 0 chrX 120591590 120591633 -46058663 + MurSAT1 Satellite Satellite 50 92 -28 1 1505 245 163 0 0 chrX 120591971 120592014 -46058282 + MurSAT1 Satellite Satellite 50 92 -28 1 1505 252 290 12 12 chrX 120592202 120592395 -46057901 + MurSAT1 Satellite Satellite 1 193 -10 1 1505 261 326 11 11 chrX 120592718 120592848 -46057448 + MurSAT1 Satellite Satellite 1 130 -1 1 1505 270 310 9 9 chrX 120592884 120592998 -46057298 + MurSAT1 Satellite Satellite 6 119 -1 1 1505 275 324 0 0 chrX 120593623 120593732 -46056564 + MurSAT1 Satellite Satellite 1 116 -4 1 1505 328 292 22 22 chrX 120594136 120594423 -46055873 + MurSAT1 Satellite Satellite 1 287 -1 1 1505 257 357 0 0 chrX 120594664 120594762 -46055534 + MurSAT1 Satellite Satellite 1 98 -22 1 1505 267 282 6 6 chrX 120595199 120595308 -46054988 + MurSAT1 Satellite Satellite 1 109 0 1 1505 270 293 0 0 chrX 120596353 120596435 -46053861 + MurSAT1 Satellite Satellite 1 82 -38 1 1505 22 0 0 0 chrX 120598955 120598977 -46051319 + AT_rich Low_complexity Low_complexity 1 22 0 1 1505 793 168 14 0 chrX 120599014 120599157 -46051139 + B1_Mus1 SINE Alu 4 148 0 1 1505 836 154 0 6 chrX 120599157 120599314 -46050982 + GA-rich Low_complexity Low_complexity 2 157 0 1 1505 225 0 0 0 chrX 120599369 120599394 -46050902 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1505 198 0 0 0 chrX 120599450 120599472 -46050824 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1 1505 28 0 0 0 chrX 120599564 120599592 -46050704 + AT_rich Low_complexity Low_complexity 1 28 0 1 1505 864 129 14 0 chrX 120599685 120599824 -46050472 + B1_Mus1 SINE Alu 2 142 -6 1 1505 818 143 0 7 chrX 120599829 120599977 -46050319 + (GAAA)n Simple_repeat Simple_repeat 2 148 0 1 1505 780 175 7 0 chrX 120600294 120600431 -46049865 + B1_Mus1 SINE Alu 3 140 -8 1 1505 699 104 0 0 chrX 120600441 120600547 -46049749 + (GAAA)n Simple_repeat Simple_repeat 2 107 0 1 1505 28 0 0 0 chrX 120600579 120600607 -46049689 + AT_rich Low_complexity Low_complexity 1 28 0 1 1505 210 37 0 0 chrX 120600666 120600693 -46049603 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1505 189 0 0 0 chrX 120600848 120600869 -46049427 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1505 841 170 0 0 chrX 120600905 120601046 -46049250 + B1_Mus1 SINE Alu 2 142 -6 1 1505 208 85 20 41 chrX 120601059 120601108 -46049188 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 1 1505 258 244 0 0 chrX 120601212 120601298 -46048998 + T-rich Low_complexity Low_complexity 1 86 0 1 1505 243 79 0 0 chrX 120601350 120601388 -46048908 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1505 23 0 0 0 chrX 120601440 120601463 -46048833 + AT_rich Low_complexity Low_complexity 1 23 0 1 1505 801 178 7 0 chrX 120601497 120601643 -46048653 + B1_Mus1 SINE Alu 2 148 0 1 1505 884 169 12 0 chrX 120601667 120601839 -46048457 + GA-rich Low_complexity Low_complexity 3 176 0 1 1505 206 238 0 48 chrX 120602064 120602148 -46048148 + T-rich Low_complexity Low_complexity 3 82 0 1 1505 867 129 14 7 chrX 120602154 120602294 -46048002 + B1_Mus1 SINE Alu 2 142 -6 1 1505 1010 171 7 11 chrX 120602333 120602635 -46047661 + GA-rich Low_complexity Low_complexity 1 300 0 1 1505 609 210 17 11 chrX 120602635 120602691 -46047605 + polypurine Low_complexity Low_complexity 125 180 0 1 1505 288 0 0 0 chrX 120602923 120602955 -46047341 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1505 776 153 22 14 chrX 120603024 120603163 -46047133 + B1_Mus1 SINE Alu 2 141 -7 1 1505 207 0 0 0 chrX 120603167 120603190 -46047106 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1505 310 160 26 77 chrX 120603352 120603508 -46046788 + (TTA)n Simple_repeat Simple_repeat 3 150 0 1 1505 306 0 0 0 chrX 120604116 120604150 -46046146 + (TTA)n Simple_repeat Simple_repeat 1 34 0 1 1505 32 81 0 0 chrX 120604407 120604481 -46045815 + AT_rich Low_complexity Low_complexity 1 74 0 1 1505 25 31 0 0 chrX 120604607 120604639 -46045657 + AT_rich Low_complexity Low_complexity 1 32 0 1 1505 22 0 0 0 chrX 120604662 120604684 -46045612 + AT_rich Low_complexity Low_complexity 1 22 0 1 1505 21 36 0 0 chrX 120605339 120605367 -46044929 + AT_rich Low_complexity Low_complexity 1 28 0 1 1505 281 133 0 62 chrX 120605645 120605725 -46044571 + A-rich Low_complexity Low_complexity 1 75 0 1 1505 183 42 0 0 chrX 120606513 120606537 -46043759 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1505 198 0 0 0 chrX 120606561 120606583 -46043713 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1505 396 0 0 0 chrX 120606876 120606920 -46043376 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 1505 210 37 0 0 chrX 120606955 120606982 -46043314 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 1 1505 21 0 0 0 chrX 120607089 120607110 -46043186 + AT_rich Low_complexity Low_complexity 1 21 0 1 1505 187 31 62 0 chrX 120607233 120607265 -46043031 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1505 294 29 0 0 chrX 120607373 120607408 -46042888 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1 1505 207 88 0 0 chrX 120607563 120607597 -46042699 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 1 1505 969 56 0 0 chrX 120607640 120607766 -46042530 + B1_Mus2 SINE Alu 12 137 -10 1 1505 380 20 0 20 chrX 120607766 120607816 -46042480 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1 1505 216 145 0 127 chrX 120607819 120607898 -46042398 + T-rich Low_complexity Low_complexity 3 71 0 1 1505 270 0 0 0 chrX 120607907 120607937 -46042359 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 1505 22 0 0 0 chrX 120607937 120607959 -46042337 + AT_rich Low_complexity Low_complexity 1 22 0 1 1505 1088 79 0 0 chrX 120607994 120608134 -46042162 + B1_Mus1 SINE Alu 2 141 -7 1 1505 369 0 0 0 chrX 120608137 120608178 -46042118 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 1 1505 243 61 0 0 chrX 120609012 120609045 -46041251 + (A)n Simple_repeat Simple_repeat 1 33 0 1 1505 1157 55 7 0 chrX 120609348 120609493 -46040803 + B1_Mus2 SINE Alu 2 147 0 1 1505 185 108 0 26 chrX 120609717 120609755 -46040541 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 1 1505 1039 102 0 0 chrX 120609837 120609984 -46040312 + B1_Mus1 SINE Alu 2 148 0 1 1505 194 0 39 0 chrX 120609984 120610010 -46040286 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1 1505 219 140 0 0 chrX 120610098 120610148 -46040148 + (T)n Simple_repeat Simple_repeat 1 50 0 1 1505 180 135 0 0 chrX 120610254 120610291 -46040005 + (A)n Simple_repeat Simple_repeat 1 37 0 1 1505 222 37 0 0 chrX 120610505 120610532 -46039764 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1505 191 61 0 29 chrX 120610649 120610683 -46039613 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 1505 216 0 0 0 chrX 120610743 120610767 -46039529 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 2 1505 408 55 0 0 chrX 120611037 120611092 -46039204 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1505 183 80 0 0 chrX 120611254 120611279 -46039017 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1505 403 323 79 64 chrX 120612223 120612630 -46037666 + L1MD LINE L1 3068 3480 -2666 2 1505 312 18 17 68 chrX 120612661 120612720 -46037576 + (CAAAAA)n Simple_repeat Simple_repeat 4 59 0 2 1505 190 73 24 24 chrX 120612825 120612867 -46037429 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 2 1505 189 132 0 0 chrX 120613822 120613860 -46036436 + (T)n Simple_repeat Simple_repeat 1 38 0 2 1505 3380 132 20 0 chrX 120614666 120615265 -46035031 + L1_Mur1 LINE L1 1429 2039 -3847 2 1505 2525 126 5 0 chrX 120615658 120616086 -46034210 + L1_Mur1 LINE L1 2086 2515 -3371 2 1505 1635 189 32 66 chrX 120616086 120616493 -46033803 + RLTR9C LTR ERVK 1 393 0 2 1505 3762 199 27 108 chrX 120616502 120617764 -46032532 + MMETn-int LTR ERVK 10 1169 -3675 2 1505 2221 192 24 20 chrX 120617781 120618281 -46032015 + ETnERV2-int LTR ERVK 2496 2997 -4409 2 1505 903 152 0 18 chrX 120618281 120618449 -46031847 + RLTR13D1 LTR ERVK 486 650 -156 2 1505 3545 181 28 33 chrX 120619009 120620467 -46029829 + ETnERV2-int LTR ERVK 2357 4085 -3321 2 1505 2383 62 23 0 chrX 120620472 120620779 -46029517 - IAPLTR2b LTR ERVK -13 314 1 2 1505 12716 85 12 9 chrX 120620779 120622599 -46027697 - IAPEz-int LTR ERVK 0 6481 4656 2 1505 1773 75 4 0 chrX 120622598 120622837 -46027459 - IAPEY3-int LTR ERVK -5183 2497 2258 2 1505 379 105 0 0 chrX 120622842 120622899 -46027397 - B1_Mus1 SINE Alu -91 57 1 2 1505 4320 137 87 62 chrX 120622899 120623830 -46026466 - IAPEz-int LTR ERVK -5486 995 1 2 1505 2191 83 23 3 chrX 120623850 120624152 -46026144 - IAPLTR2b LTR ERVK -19 308 1 2 1505 1032 230 13 53 chrX 120624161 120624749 -46025547 + ETnERV2-int LTR ERVK 2901 3746 -1098 2 1505 422 118 0 26 chrX 120624959 120625037 -46025259 + ETnERV2-int LTR ERVK 7327 7402 -4 2 1505 1558 195 57 89 chrX 120625039 120625445 -46024851 + RLTR9C LTR ERVK 1 393 0 2 1505 11195 139 34 14 chrX 120625445 120627006 -46023290 + L1_Mur1 LINE L1 2510 4122 -1764 2 1505 423 0 0 0 chrX 120627006 120627053 -46023243 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1505 11195 139 34 14 chrX 120627053 120627641 -46022655 + L1_Mur1 LINE L1 4123 4702 -1184 2 1505 1813 147 3 10 chrX 120627643 120627946 -46022350 + RLTR22_Mus LTR ERVK 3 303 -1505 2 1505 559 64 0 0 chrX 120628474 120628552 -46021744 + RLTR22_Mus LTR ERVK 294 371 -1437 2 1505 8212 107 2 3 chrX 120628555 120630499 -46019797 - L1_Mus2 LINE L1 0 6566 4623 2 1505 2934 53 3 0 chrX 120630500 120630856 -46019440 - IAPEY2_LTR LTR ERVK 0 357 1 2 1505 3882 109 21 7 chrX 120630856 120631465 -46018831 - IAPEy-int LTR ERVK 0 7513 6896 2 1505 448 51 0 0 chrX 120631465 120631524 -46018772 - IAPEY3-int LTR ERVK -2770 4910 4852 2 1505 3146 89 11 0 chrX 120631517 120631964 -46018332 - IAPEY3-int LTR ERVK -4991 2689 2238 2 1505 8749 134 13 23 chrX 120631941 120633568 -46016728 - IAPEY3-int LTR ERVK -5698 1982 22 2 1505 2624 71 62 0 chrX 120633568 120633904 -46016392 - IAPEY2_LTR LTR ERVK 0 357 1 2 1505 14002 142 5 5 chrX 120633904 120636404 -46013892 - L1_Mus2 LINE L1 -1256 4627 2128 2 1505 404 91 0 0 chrX 120636409 120636475 -46013821 + L1_Mm LINE L1 3661 3726 -2157 2 1505 2063 114 18 32 chrX 120636484 120636857 -46013439 + RLTR22_Mus LTR ERVK 354 832 -1016 2 1505 180 0 0 0 chrX 120636857 120636877 -46013419 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1505 275 153 81 27 chrX 120637035 120637056 -46013240 - PB1D9 SINE Alu -2 118 96 2 1505 1248 84 0 11 chrX 120637056 120637237 -46013059 + L1Md_F2 LINE L1 6392 6570 -12 2 1505 275 153 81 27 chrX 120637237 120637289 -46013007 - PB1D9 SINE Alu -25 95 41 2 1505 567 107 0 0 chrX 120637289 120637321 -46012975 - 4.5SRNA scRNA scRNA -4 90 7 2 1505 1072 42 0 0 chrX 120637321 120637463 -46012833 + L1_Mm LINE L1 3275 3416 -2467 2 1505 6583 148 23 55 chrX 120637463 120637717 -46012579 + Lx3A LINE L1 5770 6022 -959 2 1505 243 0 0 0 chrX 120637717 120637744 -46012552 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 2 1505 6583 148 23 55 chrX 120637744 120638735 -46011561 + Lx3A LINE L1 6023 6974 -7 2 1505 332 41 0 39 chrX 120638738 120638789 -46011507 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 2 1505 578 14 14 0 chrX 120638838 120638909 -46011387 + (TC)n Simple_repeat Simple_repeat 1 72 0 2 1505 443 239 11 0 chrX 120639922 120640010 -46010286 + ID_B1 SINE B4 135 223 -1 2 1505 246 402 108 0 chrX 120640232 120640334 -46009962 + B3A SINE B2 69 181 -17 2 1505 243 0 0 0 chrX 120640336 120640363 -46009933 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1505 590 320 19 9 chrX 120640693 120640904 -46009392 - ID_B1 SINE B4 -8 216 4 2 1505 729 274 36 23 chrX 120640991 120641211 -46009085 + MTD LTR MaLR 3 225 -194 2 1505 281 82 20 0 chrX 120641222 120641271 -46009025 + (CAAAAA)n Simple_repeat Simple_repeat 3 52 0 2 1505 378 361 20 20 chrX 120641287 120641434 -46008862 + RSINE1 SINE B4 4 150 -15 2 1505 312 27 0 0 chrX 120641440 120641477 -46008819 + (TAA)n Simple_repeat Simple_repeat 3 39 0 2 1505 23 0 0 0 chrX 120641531 120641554 -46008742 + AT_rich Low_complexity Low_complexity 1 23 0 2 1505 674 324 35 103 chrX 120641648 120642016 -46008280 - MTE2a LTR MaLR -34 345 3 2 1505 1343 316 142 103 chrX 120642023 120643215 -46007081 - MTE2a-int LTR MaLR -137 1443 37 2 1505 262 305 183 23 chrX 120643416 120643765 -46006531 - Lx9 LINE L1 -15 7629 7225 2 1505 345 248 37 81 chrX 120643822 120643958 -46006338 - Lx9 LINE L1 -553 7091 6962 2 1505 8031 39 6 0 chrX 120644255 120645233 -46005063 + L1Md_A LINE L1 5599 6582 0 2 1505 13486 48 5 14 chrX 120645233 120647993 -46002303 - L1Md_A LINE L1 -2920 2963 232 2 1505 1445 251 44 14 chrX 120648587 120649023 -46001273 - Lx2B LINE L1 -17 6983 6535 2 1505 791 158 26 7 chrX 120649025 120649178 -46001118 - Lx2B LINE L1 -689 6311 6156 2 1505 406 333 16 24 chrX 120649201 120649324 -46000972 - B3 SINE B2 -93 123 2 2 1505 1057 89 0 52 chrX 120649557 120649711 -46000585 + B1_Mm SINE Alu 2 147 0 2 1505 504 132 0 0 chrX 120649711 120649817 -46000479 + (A)n Simple_repeat Simple_repeat 1 106 0 2 1505 251 93 0 23 chrX 120650006 120650050 -46000246 + (TATG)n Simple_repeat Simple_repeat 4 46 0 2 1505 1110 258 56 85 chrX 120650869 120651259 -45999037 - ORR1C2 LTR MaLR 0 384 6 2 1505 801 175 0 0 chrX 120651271 120651425 -45998871 - Lx2 LINE L1 0 6997 6844 2 1505 1888 180 3 8 chrX 120651425 120651811 -45998485 + Lx2 LINE L1 5904 6287 -710 2 1505 207 224 0 39 chrX 120651839 120651852 -45998444 + polypyrimidine Low_complexity Low_complexity 38 49 0 2 1505 380 63 32 0 chrX 120651852 120651915 -45998381 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 2 1505 207 224 0 39 chrX 120651915 120651952 -45998344 + polypyrimidine Low_complexity Low_complexity 1 37 0 2 1505 291 122 0 0 chrX 120651987 120652036 -45998260 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1505 540 301 37 0 chrX 120652060 120652196 -45998100 - RSINE1 SINE B4 -22 143 3 2 1505 354 45 0 0 chrX 120652312 120652356 -45997940 + (GGAA)n Simple_repeat Simple_repeat 2 45 0 2 1505 231 189 19 19 chrX 120652396 120652450 -45997846 + ORR1D2 LTR MaLR 1 54 -324 2 1505 840 271 97 94 chrX 120652484 120652826 -45997470 + ORR1D2 LTR MaLR 24 366 -4 2 1505 378 269 87 15 chrX 120652895 120653091 -45997205 + L1MD3 LINE L1 7773 7982 -13 2 1505 2392 267 28 28 chrX 120653788 120653917 -45996379 - RMER1B Other Other -4 1062 933 2 1505 1914 55 0 0 chrX 120653917 120654153 -45996143 + L1Md_F2 LINE L1 6328 6563 -19 2 1505 2392 277 35 41 chrX 120654153 120655044 -45995252 - RMER1B Other Other -134 932 106 2 1505 1145 259 18 21 chrX 120655047 120655327 -45994969 + ORR1B1 LTR MaLR 116 394 0 2 1505 1635 249 55 137 chrX 120655378 120655982 -45994314 - RLTR1D LTR ERV1 0 605 52 2 1505 928 121 81 0 chrX 120656175 120656315 -45993981 + Lx3C LINE L1 5889 6028 -948 2 1505 792 50 0 0 chrX 120656315 120656416 -45993880 + (GA)n Simple_repeat Simple_repeat 2 102 0 2 1505 928 121 81 0 chrX 120656416 120656448 -45993848 + Lx3C LINE L1 6029 6073 -903 2 1505 643 153 23 23 chrX 120656452 120656598 -45993698 + RMER17D2 LTR ERVK 703 906 0 2 1505 473 303 52 52 chrX 120658093 120658438 -45991858 + MuLV-int LTR ERV1 7115 7459 -147 2 1505 491 122 19 37 chrX 120659239 120659401 -45990895 + A-rich Low_complexity Low_complexity 4 162 0 2 1505 2254 146 28 55 chrX 120659401 120659872 -45990424 + Lx3_Mus LINE L1 5783 6240 -769 2 1505 4646 120 11 1 chrX 120659868 120660613 -45989683 - L1_Mm LINE L1 -180 5703 4952 2 1505 270 333 0 0 chrX 120660709 120660790 -45989506 - ORR1D2 LTR MaLR -284 86 6 2 1505 920 288 96 32 chrX 120661109 120661492 -45988804 + MT2A LTR ERVL 1 528 -73 2 1505 480 18 0 0 chrX 120661497 120661554 -45988742 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1505 2193 213 50 16 chrX 120661696 120662197 -45988099 - Lx2B LINE L1 -6 6994 6477 2 1505 2106 180 9 18 chrX 120662188 120662646 -45987650 + L1_Mur1 LINE L1 5104 5557 -329 2 1505 6578 98 2 10 chrX 120662648 120663950 -45986346 - L1Md_F2 LINE L1 -1 6581 5294 2 1505 2075 75 0 7 chrX 120663950 120664233 -45986063 - L1Md_F2 LINE L1 -2 6580 6300 2 1505 6392 97 6 21 chrX 120664233 120665385 -45984911 - L1Md_F LINE L1 -4498 1385 294 2 1505 501 243 37 53 chrX 120665378 120665445 -45984851 + Lx2B LINE L1 5535 5597 -280 2 1505 3449 30 2 0 chrX 120665445 120665840 -45984456 - MTA_Mm LTR MaLR 0 396 1 2 1505 9317 30 2 1 chrX 120665840 120666937 -45983359 - MTA_Mm-int LTR MaLR 0 1098 1 2 1505 3381 38 2 0 chrX 120666937 120667332 -45982964 - MTA_Mm LTR MaLR 0 396 1 2 1505 560 179 54 0 chrX 120667337 120667449 -45982847 + Lx2B LINE L1 5607 5724 -1284 2 1505 340 184 68 120 chrX 120667450 120667567 -45982729 + MT2B LTR ERVL 154 264 -337 2 1505 656 111 10 0 chrX 120667501 120667600 -45982696 + B1_Mus2 SINE Alu 47 146 -1 2 1505 205 27 0 75 chrX 120667609 120667649 -45982647 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 2 1505 2511 158 13 66 chrX 120667649 120668192 -45982104 + Lx2B LINE L1 5769 6282 -718 2 1505 333 303 30 10 chrX 120668387 120668487 -45981809 + RSINE1 SINE B4 56 157 -8 2 1505 298 156 0 0 chrX 120668545 120668590 -45981706 - L1_Mur3 LINE L1 -2356 3524 3480 2 1505 2686 65 3 0 chrX 120668787 120669140 -45981156 - RLTR13A LTR ERVK -501 354 1 2 1505 8082 108 8 1 chrX 120669836 120671440 -45978856 - L1_Mus2 LINE L1 -297 6269 4652 2 1505 375 303 124 32 chrX 120671569 120671972 -45978324 + Charlie2a DNA MER1_type 1858 2297 -564 2 1505 427 142 9 36 chrX 120671980 120672090 -45978206 + CT-rich Low_complexity Low_complexity 2 108 0 2 1505 1126 88 0 0 chrX 120672090 120672238 -45978058 - B1_Mus1 SINE Alu 0 148 1 2 1505 405 297 90 36 chrX 120672374 120672485 -45977811 + Charlie2a DNA MER1_type 2476 2591 -270 2 1505 4174 123 122 3 chrX 120672485 120673179 -45977117 - L1_Mus3 LINE L1 -4 6634 5858 2 1505 405 297 90 36 chrX 120673179 120673402 -45976894 + Charlie2a DNA MER1_type 2592 2828 -33 2 1505 559 344 12 0 chrX 120673407 120673567 -45976729 + B3 SINE B2 5 166 -50 2 1505 315 0 0 0 chrX 120673567 120673602 -45976694 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1505 403 99 0 0 chrX 120673656 120673727 -45976569 - L1_Mus3 LINE L1 -4 6634 6564 2 1505 6750 66 9 7 chrX 120673727 120674638 -45975658 + MTA_Mm-int LTR MaLR 92 1004 -94 2 1505 2767 21 3 0 chrX 120674638 120674974 -45975322 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1505 55235 21 18 6 chrX 120674974 120681373 -45968923 - IAPEz-int LTR ERVK 0 6481 8 2 1505 2940 27 0 0 chrX 120681373 120681710 -45968586 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1505 734 30 10 0 chrX 120681710 120681809 -45968487 + MTA_Mm-int LTR MaLR 999 1098 0 2 1505 3038 38 67 0 chrX 120681809 120682180 -45968116 + MTA_Mm LTR MaLR 1 396 0 2 1505 4169 190 2 5 chrX 120682207 120683007 -45967289 - L1_Mus3 LINE L1 -526 5357 4560 2 1505 2679 158 2 31 chrX 120683004 120683492 -45966804 + L1_Mus3 LINE L1 5365 5782 -101 2 1505 951 109 0 14 chrX 120683492 120683632 -45966664 - B1_Mm SINE Alu -9 138 1 2 1505 5744 120 3 11 chrX 120683632 120684519 -45965777 + L1_Mus3 LINE L1 5771 6626 -12 2 1505 3576 210 63 73 chrX 120684528 120686050 -45964246 + RMER17C-int LTR ERVK 1946 3238 0 3 1505 272 268 81 132 chrX 120686050 120686308 -45963988 + RMER17C LTR ERVK 2 246 -164 3 1505 326 287 0 22 chrX 120686473 120686562 -45963734 + B4A SINE B4 206 292 0 3 1505 1028 336 34 48 chrX 120686656 120687276 -45963020 + RMER15-int LTR ERVL 1145 1755 -3244 3 1505 635 351 56 11 chrX 120687291 120687648 -45962648 + MTE2b LTR MaLR 5 377 -2 3 1505 570 326 10 25 chrX 120687656 120687857 -45962439 + MTE2b-int LTR MaLR 6 203 -1377 3 1505 1373 296 20 15 chrX 120687865 120688270 -45962026 - MTD LTR MaLR -12 407 1 3 1505 503 335 27 5 chrX 120688275 120688461 -45961835 + MTE2b-int LTR MaLR 213 402 -1178 3 1505 752 320 87 13 chrX 120688477 120688775 -45961521 + MTE2b-int LTR MaLR 553 872 -708 3 1505 740 325 55 45 chrX 120688826 120689138 -45961158 + ORR1D2 LTR MaLR 1 315 -55 3 1505 278 316 46 134 chrX 120689140 120689334 -45960962 - RLTR24 LTR ERV1 -75 454 278 3 1505 3208 198 51 49 chrX 120689335 120690516 -45959780 + Lx5 LINE L1 5176 6380 -670 3 1505 436 161 11 79 chrX 120690528 120690617 -45959679 - RMER19A LTR ERVK -27 710 636 3 1505 1633 295 80 61 chrX 120690672 120691524 -45958772 + ORR1D2-int LTR MaLR 1 827 -543 3 1505 207 0 0 0 chrX 120691641 120691664 -45958632 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1505 1125 245 149 42 chrX 120692004 120692477 -45957819 + ORR1D2-int LTR MaLR 825 1347 -23 3 1505 3386 202 16 85 chrX 120694049 120694813 -45955483 + RMER6D LTR ERVK 1 711 -9 3 1505 277 293 7 29 chrX 120695555 120695692 -45954604 + GA-rich Low_complexity Low_complexity 2 135 0 3 1505 336 143 0 0 chrX 120695739 120695795 -45954501 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 3 1505 2142 215 104 8 chrX 120696296 120696825 -45953471 - Lx3C LINE L1 -5 6971 6392 3 1505 3859 151 18 8 chrX 120696825 120697491 -45952805 - L1_Mus3 LINE L1 0 6638 5966 3 1505 12149 165 56 3 chrX 120697491 120697858 -45952438 + L1_Mus3 LINE L1 3466 3861 -2022 3 1505 2724 70 0 0 chrX 120697858 120698214 -45952082 + L1Md_T LINE L1 6227 6582 0 3 1505 12149 151 47 2 chrX 120698214 120700198 -45950098 + L1_Mus3 LINE L1 3862 5940 -698 3 1505 12994 166 26 17 chrX 120700204 120703217 -45947079 - Lx3C LINE L1 -576 6400 3363 3 1505 582 318 74 31 chrX 120703218 120703542 -45946754 + ORR1D2-int LTR MaLR 1243 1580 0 3 1505 901 323 15 11 chrX 120703630 120703890 -45946406 + MTE2b LTR MaLR 119 379 0 3 1505 722 361 7 82 chrX 120704143 120704255 -45946041 + B4A SINE B4 11 117 -175 3 1505 1139 58 0 7 chrX 120704255 120704410 -45945886 - L1Md_F2 LINE L1 -13 6569 6416 3 1505 722 361 7 82 chrX 120704410 120704602 -45945694 + B4A SINE B4 118 292 0 3 1505 265 399 25 0 chrX 120704624 120704782 -45945514 + RMER15-int LTR ERVL 2002 2163 -2836 3 1505 645 280 28 0 chrX 120705094 120705308 -45944988 - URR1B DNA MER1_type -4 221 2 3 1505 981 355 50 44 chrX 120705308 120706036 -45944260 + RMER15-int LTR ERVL 4261 4992 -7 3 1505 493 350 98 35 chrX 120706670 120707008 -45943288 - L2a LINE L2 -84 3342 2984 3 1505 199 372 19 10 chrX 120707156 120707259 -45943037 - L2a LINE L2 -949 2470 2367 3 1505 252 114 0 0 chrX 120707540 120707575 -45942721 - L1_Mur1 LINE L1 -315 5571 5537 3 1505 336 292 8 15 chrX 120707670 120707802 -45942494 + GA-rich Low_complexity Low_complexity 1 131 0 3 1505 359 296 3 60 chrX 120707833 120708075 -45942221 + GA-rich Low_complexity Low_complexity 1 228 0 3 1505 282 322 22 22 chrX 120708089 120708267 -45942029 + CT-rich Low_complexity Low_complexity 2 179 0 3 1505 336 314 6 25 chrX 120708824 120708987 -45941309 + GA-rich Low_complexity Low_complexity 2 161 0 3 1505 657 101 0 0 chrX 120708987 120709086 -45941210 + (GAAA)n Simple_repeat Simple_repeat 3 101 0 3 1505 208 250 0 30 chrX 120709226 120709292 -45941004 + CT-rich Low_complexity Low_complexity 1 64 0 3 1505 180 152 0 0 chrX 120709321 120709354 -45940942 + CT-rich Low_complexity Low_complexity 2 34 0 3 1505 363 328 6 11 chrX 120709673 120709849 -45940447 + CT-rich Low_complexity Low_complexity 2 176 0 3 1505 847 78 8 8 chrX 120709921 120710051 -45940245 + (TA)n Simple_repeat Simple_repeat 2 131 0 3 1505 216 86 0 0 chrX 120710051 120710085 -45940211 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1505 400 323 6 18 chrX 120710090 120710254 -45940042 + CT-rich Low_complexity Low_complexity 1 162 0 3 1505 372 326 7 37 chrX 120710458 120710799 -45939497 + GA-rich Low_complexity Low_complexity 1 331 0 3 1505 358 327 50 38 chrX 120711028 120711187 -45939109 + HAL1-3A_ME LINE L1 2288 2448 -410 3 1505 212 254 8 8 chrX 120711208 120711339 -45938957 + GA-rich Low_complexity Low_complexity 1 131 0 3 1505 349 259 113 49 chrX 120711448 120711590 -45938706 - HAL1-3A_ME LINE L1 -417 2441 2291 3 1505 344 358 11 24 chrX 120711599 120711904 -45938392 + CT-rich Low_complexity Low_complexity 1 300 0 3 1505 450 0 0 0 chrX 120711954 120712004 -45938292 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 1505 314 277 75 68 chrX 120712018 120712165 -45938131 - HAL1-3A_ME LINE L1 -419 2439 2292 3 1505 236 336 7 25 chrX 120712169 120712376 -45937920 + CT-rich Low_complexity Low_complexity 1 203 0 3 1505 259 354 7 24 chrX 120712419 120712643 -45937653 + GA-rich Low_complexity Low_complexity 1 220 0 3 1505 218 185 12 36 chrX 120712670 120712754 -45937542 + GA-rich Low_complexity Low_complexity 5 86 0 3 1505 384 230 21 32 chrX 120712792 120713076 -45937220 + GA-rich Low_complexity Low_complexity 1 280 0 3 1505 183 270 17 17 chrX 120713142 120713319 -45936977 + GA-rich Low_complexity Low_complexity 1 177 0 3 1505 369 0 0 0 chrX 120714583 120714624 -45935672 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1505 198 179 0 0 chrX 120715955 120716011 -45934285 + T-rich Low_complexity Low_complexity 5 60 0 3 1505 238 146 20 40 chrX 120716100 120716150 -45934146 - MT2B2 LTR ERVL 0 584 536 3 1505 713 85 9 0 chrX 120716164 120716270 -45934026 + (TC)n Simple_repeat Simple_repeat 2 108 0 3 1505 6662 114 6 1 chrX 120716332 120717306 -45932990 + L1_Mus3 LINE L1 5657 6635 -3 3 1506 220 149 21 21 chrX 120717410 120717458 -45932838 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1506 705 323 0 30 chrX 120718144 120718345 -45931951 + B3 SINE B2 17 211 -5 3 1506 524 151 10 31 chrX 120718539 120718635 -45931661 + RLTR9C LTR ERVK 300 393 0 3 1506 300 265 19 56 chrX 120718636 120718744 -45931552 + MMETn-int LTR ERVK 1 104 -4740 3 1506 3267 192 49 68 chrX 120718779 120719917 -45930379 + MMETn-int LTR ERVK 364 1631 -5775 3 1506 2219 200 22 34 chrX 120719944 120720452 -45929844 + MMETn-int LTR ERVK 2496 2997 -4409 3 1506 881 158 0 18 chrX 120720452 120720620 -45929676 + RLTR13D1 LTR ERVK 486 650 -156 3 1506 3683 195 27 53 chrX 120721194 120723228 -45927068 + MMETn-int LTR ERVK 2357 6420 -986 3 1506 426 139 0 25 chrX 120723440 120723521 -45926775 + MMETn-int LTR ERVK 7327 7405 -1 3 1506 1480 208 54 88 chrX 120723522 120723929 -45926367 + RLTR9C LTR ERVK 1 393 0 3 1506 904 85 0 8 chrX 120723929 120724060 -45926236 + L1_Mur1 LINE L1 2510 2639 -3247 3 1506 11385 117 3 8 chrX 120724058 120725795 -45924501 - L1_Mm LINE L1 -61 5822 4093 3 1506 333 0 0 0 chrX 120725809 120725846 -45924450 + (T)n Simple_repeat Simple_repeat 1 37 0 3 1506 1430 78 0 19 chrX 120726374 120726582 -45923714 + L1Md_F2 LINE L1 6368 6571 -11 3 1506 456 103 0 0 chrX 120726582 120726650 -45923646 - 4.5SRNA scRNA scRNA -7 87 20 3 1506 5189 131 1 10 chrX 120726650 120727513 -45922783 - L1_Mm LINE L1 -1793 4090 3236 3 1506 2982 52 4 0 chrX 120727513 120727896 -45922400 - L1Md_F2 LINE L1 -643 5939 5584 3 1506 4949 78 0 9 chrX 120727896 120728567 -45921729 + L1Md_F2 LINE L1 5907 6571 -11 3 1506 547 111 0 0 chrX 120728567 120728648 -45921648 - 4.5SRNA scRNA scRNA -7 87 7 3 1506 1129 35 0 0 chrX 120728648 120728790 -45921506 + L1_Mm LINE L1 3275 3416 -2467 3 1506 7022 140 12 31 chrX 120728790 120730019 -45920277 + Lx3A LINE L1 5770 6975 -6 3 1506 356 38 0 36 chrX 120730022 120730077 -45920219 + (TAAA)n Simple_repeat Simple_repeat 1 53 0 3 1506 627 14 0 0 chrX 120730127 120730199 -45920097 + (TC)n Simple_repeat Simple_repeat 2 73 0 3 1506 333 0 0 0 chrX 120730329 120730366 -45919930 + (T)n Simple_repeat Simple_repeat 1 37 0 3 1506 461 214 11 0 chrX 120731243 120731332 -45918964 + ID_B1 SINE B4 135 224 0 3 1506 297 333 234 0 chrX 120731503 120731644 -45918652 + B3A SINE B2 8 181 -17 3 1506 405 0 0 0 chrX 120731646 120731691 -45918605 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1506 646 311 19 9 chrX 120732024 120732235 -45918061 - ID_B1 SINE B4 -8 216 4 3 1506 1173 300 24 10 chrX 120732322 120732733 -45917563 + MTD LTR MaLR 3 419 0 3 1506 317 336 26 26 chrX 120732819 120732935 -45917361 + PB1D10 SINE Alu 2 117 0 3 1506 387 341 15 23 chrX 120732973 120733105 -45917191 + RSINE1 SINE B4 4 134 -31 3 1506 269 51 0 25 chrX 120733127 120733167 -45917129 + (TAA)n Simple_repeat Simple_repeat 3 41 0 3 1506 703 308 46 113 chrX 120733325 120733695 -45916601 - MTE2a LTR MaLR -34 345 1 3 1506 1611 314 153 40 chrX 120733696 120734448 -45915848 - MTE2a-int LTR MaLR -1 1579 743 3 1506 1017 323 22 25 chrX 120734528 120734893 -45915403 - MTE2a-int LTR MaLR -1180 400 37 3 1506 30 27 0 0 chrX 120735072 120735109 -45915187 + AT_rich Low_complexity Low_complexity 1 37 0 3 1506 315 0 0 0 chrX 120735205 120735240 -45915056 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1506 324 322 63 19 chrX 120735257 120735463 -45914833 - Lx9 LINE L1 -205 7439 7225 3 1506 439 237 35 78 chrX 120735517 120735659 -45914637 - Lx9 LINE L1 -547 7097 6962 3 1506 2896 53 53 3 chrX 120736507 120736884 -45913412 + MTA_Mm LTR MaLR 1 396 0 3 1506 207 0 0 0 chrX 120737189 120737212 -45913084 + (TTA)n Simple_repeat Simple_repeat 1 23 0 3 1506 246 128 0 0 chrX 120737304 120737343 -45912953 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 1506 185 108 27 0 chrX 120737413 120737450 -45912846 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1506 585 42 0 0 chrX 120737450 120737521 -45912775 + (GA)n Simple_repeat Simple_repeat 2 73 0 3 1506 543 275 124 37 chrX 120737560 120737802 -45912494 - Lx7 LINE L1 -398 7298 7036 3 1506 352 228 0 32 chrX 120738712 120738807 -45911489 - RNLTR23 LTR ERVK 0 642 551 3 1506 342 100 0 0 chrX 120738807 120738867 -45911429 + (A)n Simple_repeat Simple_repeat 1 60 0 3 1506 22 0 0 0 chrX 120739257 120739279 -45911017 + AT_rich Low_complexity Low_complexity 1 22 0 3 1506 4484 114 6 101 chrX 120739685 120740526 -45909770 + L1Md_F LINE L1 360 1120 -5399 3 1506 4849 60 0 3 chrX 120740529 120741151 -45909145 + L1Md_F2 LINE L1 5963 6582 0 3 1506 1554 246 61 26 chrX 120741371 120741827 -45908469 - Lx2B LINE L1 -5 6995 6524 3 1506 813 171 26 7 chrX 120741819 120741972 -45908324 - Lx2B LINE L1 -689 6311 6156 3 1506 370 350 16 24 chrX 120741995 120742118 -45908178 - B3 SINE B2 -93 123 2 3 1506 1164 75 0 0 chrX 120742351 120742497 -45907799 + B1_Mm SINE Alu 2 147 0 3 1506 306 125 0 0 chrX 120742497 120742545 -45907751 + (A)n Simple_repeat Simple_repeat 1 48 0 3 1506 227 103 0 25 chrX 120742741 120742781 -45907515 + (TATG)n Simple_repeat Simple_repeat 4 42 0 3 1506 1131 256 57 83 chrX 120743602 120743989 -45906307 - ORR1C2 LTR MaLR 0 384 8 3 1506 786 175 0 0 chrX 120744005 120744159 -45906137 - Lx2 LINE L1 0 6997 6844 3 1506 1722 186 6 3 chrX 120744159 120744499 -45905797 + Lx2 LINE L1 5904 6244 -753 3 1506 240 239 0 137 chrX 120744499 120744580 -45905716 - LTR68 LTR ERV1 -454 286 215 3 1506 336 77 0 0 chrX 120744580 120744632 -45905664 + (TCTCTG)n Simple_repeat Simple_repeat 2 53 0 3 1506 240 239 0 137 chrX 120744632 120744652 -45905644 - LTR68 LTR ERV1 -526 214 199 3 1506 375 23 0 0 chrX 120744690 120744734 -45905562 + (TGG)n Simple_repeat Simple_repeat 1 44 0 3 1506 457 285 28 132 chrX 120744740 120744922 -45905374 - RSINE1 SINE B4 0 165 3 3 1506 267 31 0 0 chrX 120745038 120745070 -45905226 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 4 1506 826 244 66 77 chrX 120745198 120745539 -45904757 + ORR1E LTR MaLR 24 379 0 4 1506 450 270 84 15 chrX 120745607 120745810 -45904486 + L1MD3 LINE L1 7766 7982 -13 4 1506 22 0 0 0 chrX 120746609 120746631 -45903665 + AT_rich Low_complexity Low_complexity 1 22 0 4 1506 2602 276 66 28 chrX 120746713 120747700 -45902596 - RMER1B Other Other -4 1062 25 4 1506 1102 265 18 22 chrX 120747703 120747977 -45902319 + ORR1B1 LTR MaLR 116 388 -6 4 1506 1105 135 112 0 chrX 120748206 120748343 -45901953 + Lx3C LINE L1 5889 6028 -948 4 1506 705 45 0 0 chrX 120748343 120748432 -45901864 + (GA)n Simple_repeat Simple_repeat 2 90 0 4 1506 1105 135 112 0 chrX 120748432 120748509 -45901787 + Lx3C LINE L1 6029 6126 -850 4 1506 673 95 19 0 chrX 120748509 120748614 -45901682 + RMER17D2 LTR ERVK 703 809 0 4 1506 459 309 59 60 chrX 120749966 120750494 -45899802 + MuRRS4-int LTR ERV1 4459 4839 -224 4 1506 327 184 0 0 chrX 120751251 120751338 -45898958 + A-rich Low_complexity Low_complexity 1 87 0 4 1506 2474 153 26 24 chrX 120751339 120751472 -45898824 + Lx3_Mus LINE L1 5784 5910 -1099 4 1506 216 0 0 0 chrX 120751472 120751496 -45898800 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 4 1506 2474 153 26 24 chrX 120751496 120751818 -45898478 + Lx3_Mus LINE L1 5911 6240 -769 4 1506 5113 109 7 1 chrX 120751814 120752558 -45897738 - L1_Mm LINE L1 -180 5703 4956 4 1506 464 287 0 0 chrX 120752646 120752747 -45897549 - ORR1E LTR MaLR -258 101 1 4 1506 905 295 78 34 chrX 120753061 120753444 -45896852 + MT2A LTR ERVL 1 528 -73 4 1506 426 20 0 0 chrX 120753449 120753500 -45896796 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1506 2523 195 50 16 chrX 120753642 120754143 -45896153 - Lx2B LINE L1 -6 6994 6477 4 1506 2745 214 18 11 chrX 120754134 120754754 -45895542 + Lx2B LINE L1 5104 5727 -159 4 1506 342 175 68 120 chrX 120754755 120754872 -45895424 + MT2B LTR ERVL 154 264 -337 4 1506 717 119 76 45 chrX 120754775 120754907 -45895389 + B1_Mus1 SINE Alu 13 148 0 4 1506 344 0 35 35 chrX 120754913 120754971 -45895325 + (CAAAAA)n Simple_repeat Simple_repeat 3 60 0 4 1506 2652 163 13 41 chrX 120754974 120755011 -45895285 + Lx2B LINE L1 5770 5805 -1195 4 1506 315 0 0 0 chrX 120755011 120755046 -45895250 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1506 2652 163 13 41 chrX 120755046 120755546 -45894750 + Lx2B LINE L1 5806 6292 -708 4 1506 311 290 61 61 chrX 120755553 120755718 -45894578 - L1M2 LINE L1 -2222 3921 3757 4 1506 331 333 10 10 chrX 120755728 120755828 -45894468 + RSINE1 SINE B4 56 155 -10 4 1506 270 178 0 0 chrX 120755886 120755931 -45894365 - L1_Mur3 LINE L1 -2356 3524 3480 4 1506 2626 74 3 0 chrX 120756128 120756481 -45893815 - RLTR13A LTR ERVK -501 354 1 4 1506 357 370 59 34 chrX 120757381 120757585 -45892711 - HAL1 LINE L1 -2137 370 162 4 1506 2034 240 75 16 chrX 120757742 120758245 -45892051 + RLTR20B3 LTR ERVK 1 533 -44 4 1506 1181 283 84 20 chrX 120758712 120759055 -45891241 - ORR1D1 LTR MaLR -1 373 9 4 1506 400 339 71 107 chrX 120759121 120759210 -45891086 + MTE2a LTR MaLR 1 82 -337 4 1506 982 117 7 0 chrX 120759210 120759355 -45890941 + B1_Mm SINE Alu 2 147 0 4 1506 650 295 67 73 chrX 120759355 120759690 -45890606 + MTE2a LTR MaLR 68 405 -14 4 1506 812 259 24 16 chrX 120760130 120760546 -45889750 + Lx5 LINE L1 888 1295 -5362 4 1506 1018 302 93 101 chrX 120760548 120761324 -45888972 + RLTR22_Mur LTR ERVK 33 802 -1046 4 1506 303 321 41 48 chrX 120761471 120761618 -45888678 + RMER12 LTR ERVK 1104 1249 -73 4 1506 7547 240 37 101 chrX 120761618 120766072 -45884224 + Lx5 LINE L1 2881 7031 -19 4 1506 545 244 127 6 chrX 120766070 120766243 -45884053 - Lx7 LINE L1 -29 7667 7474 4 1506 351 127 0 0 chrX 120766249 120766312 -45883984 + (CA)n Simple_repeat Simple_repeat 1 63 0 4 1506 2167 115 16 3 chrX 120766433 120766756 -45883540 - ORR1A2 LTR MaLR 0 327 1 4 1506 1855 206 9 0 chrX 120766761 120767106 -45883190 + Lx7 LINE L1 6655 7002 -694 4 1506 547 289 0 27 chrX 120767212 120767358 -45882938 - MT2A LTR ERVL -391 142 1 4 1506 362 171 14 0 chrX 120767360 120767430 -45882866 - MERVL_2A-int LTR ERVL -2 5759 5689 4 1506 2985 253 42 15 chrX 120767562 120768315 -45881981 - ORR1A2-int LTR MaLR -142 1228 455 4 1506 414 297 45 22 chrX 120768324 120768599 -45881697 + Lx8 LINE L1 5401 5670 -177 4 1506 484 320 20 10 chrX 120768945 120769144 -45881152 + Lx8 LINE L1 6332 6532 -941 4 1506 4960 96 15 12 chrX 120769545 120770941 -45879355 - L1Md_F LINE L1 -3979 1904 505 4 1506 797 193 7 0 chrX 120770970 120771110 -45879186 + L1_Mm LINE L1 5545 5685 -198 4 1506 4280 62 0 2 chrX 120771113 120771663 -45878633 - L1Md_F3 LINE L1 -2 6582 6034 4 1506 3497 50 2 0 chrX 120771663 120772137 -45878159 + L1Md_F3 LINE L1 5548 6022 -562 4 1506 6160 107 5 2 chrX 120772138 120773029 -45877267 + L1_Mus2 LINE L1 5674 6566 0 4 1506 1098 194 27 27 chrX 120773033 120773329 -45876967 + L1_Mur3 LINE L1 2992 3287 -2593 4 1506 814 258 48 11 chrX 120773349 120773620 -45876676 + Lx7 LINE L1 5620 5900 -1796 4 1506 2131 192 24 31 chrX 120773623 120773863 -45876433 + MTC LTR MaLR 1 237 -184 4 1506 6442 97 6 1 chrX 120773863 120774752 -45875544 - RLTR13B1 LTR ERVK 0 893 1 4 1506 2131 192 24 31 chrX 120774752 120774935 -45875361 + MTC LTR MaLR 238 421 0 4 1506 323 326 42 50 chrX 120774941 120775180 -45875116 + Lx6 LINE L1 5905 6141 -1319 4 1506 306 281 0 17 chrX 120775172 120775288 -45875008 + Lx6 LINE L1 7332 7445 -15 4 1506 244 333 81 0 chrX 120775494 120775581 -45874715 + RSINE1 SINE B4 2 95 -70 4 1506 1352 226 14 73 chrX 120775656 120776000 -45874296 + RLTR21 LTR ERVK 1 324 -1248 4 1506 1894 211 52 41 chrX 120776056 120776640 -45873656 + RLTR21 LTR ERVK 560 1254 -150 4 1506 387 0 0 0 chrX 120776640 120776683 -45873613 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1506 615 237 40 51 chrX 120776800 120776991 -45873305 - ORR1B2 LTR MaLR -172 212 1 4 1506 186 191 0 0 chrX 120777026 120777073 -45873223 + GA-rich Low_complexity Low_complexity 1 47 0 4 1506 490 89 11 11 chrX 120777101 120777192 -45873104 + (CATA)n Simple_repeat Simple_repeat 1 91 0 4 1506 968 72 7 0 chrX 120781561 120781699 -45868597 + (GAAA)n Simple_repeat Simple_repeat 3 141 0 4 1506 3080 128 7 0 chrX 120782449 120782886 -45867410 - L1_Mus3 LINE L1 -6 6632 6193 4 1506 195 26 103 0 chrX 120783055 120783094 -45867202 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 4 1506 290 300 10 10 chrX 120789213 120789314 -45860982 + MurSAT1 Satellite Satellite 17 117 -3 4 1506 281 308 40 32 chrX 120789596 120789858 -45860438 + MurSAT1 Satellite Satellite 1 264 -3 4 1506 347 327 12 12 chrX 120789898 120790102 -45860194 + MurSAT1 Satellite Satellite 1 204 -2 4 1506 293 307 15 5 chrX 120790319 120790447 -45859849 + MurSAT1 Satellite Satellite 1 129 -3 4 1506 381 237 20 15 chrX 120790764 120790875 -45859421 + MurSAT1 Satellite Satellite 1 111 -4 4 1506 240 327 36 9 chrX 120791392 120791503 -45858793 + MurSAT1 Satellite Satellite 5 118 -2 4 1506 295 320 15 5 chrX 120792496 120792671 -45857625 + MurSAT1 Satellite Satellite 1 176 -2 4 1506 232 368 0 0 chrX 120793645 120793759 -45856537 + MurSAT1 Satellite Satellite 5 118 -2 4 1506 253 264 39 34 chrX 120794181 120794328 -45855968 + MurSAT1 Satellite Satellite 1 147 0 4 1506 313 304 18 9 chrX 120794792 120794983 -45855313 + MurSAT1 Satellite Satellite 1 192 -2 4 1506 277 330 0 0 chrX 120795379 120795476 -45854820 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 279 322 15 5 chrX 120795937 120796117 -45854179 + MurSAT1 Satellite Satellite 1 181 -2 4 1506 279 250 26 13 chrX 120796523 120796625 -45853671 + MurSAT1 Satellite Satellite 1 103 0 4 1506 306 323 22 9 chrX 120797090 120797261 -45853035 + MurSAT1 Satellite Satellite 1 173 -2 4 1506 245 323 10 10 chrX 120797677 120797774 -45852522 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 278 333 15 5 chrX 120798239 120798415 -45851881 + MurSAT1 Satellite Satellite 1 177 -2 4 1506 249 323 10 10 chrX 120798826 120798923 -45851373 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 312 323 18 5 chrX 120799392 120799559 -45850737 + MurSAT1 Satellite Satellite 1 169 -2 4 1506 247 340 0 0 chrX 120799975 120800072 -45850224 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 278 333 15 5 chrX 120800537 120800713 -45849583 + MurSAT1 Satellite Satellite 1 177 -2 4 1506 249 323 10 10 chrX 120801124 120801221 -45849075 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 312 323 18 5 chrX 120801690 120801857 -45848439 + MurSAT1 Satellite Satellite 1 169 -2 4 1506 247 340 0 0 chrX 120802273 120802370 -45847926 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 278 333 15 5 chrX 120802835 120803011 -45847285 + MurSAT1 Satellite Satellite 1 177 -2 4 1506 226 203 46 15 chrX 120803417 120803482 -45846814 + MurSAT1 Satellite Satellite 54 120 0 4 1506 312 323 18 5 chrX 120803988 120804155 -45846141 + MurSAT1 Satellite Satellite 1 169 -2 4 1506 247 340 0 0 chrX 120804571 120804668 -45845628 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 278 333 15 5 chrX 120805133 120805309 -45844987 + MurSAT1 Satellite Satellite 1 177 -2 4 1506 249 323 10 10 chrX 120805720 120805817 -45844479 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 256 294 45 18 chrX 120806342 120806453 -45843843 + MurSAT1 Satellite Satellite 5 118 -2 4 1506 263 323 10 10 chrX 120806869 120806966 -45843330 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 256 294 45 18 chrX 120807491 120807602 -45842694 + MurSAT1 Satellite Satellite 5 118 -2 4 1506 263 323 10 10 chrX 120808018 120808115 -45842181 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 323 318 18 5 chrX 120808584 120808751 -45841545 + MurSAT1 Satellite Satellite 1 169 -2 4 1506 237 340 0 0 chrX 120809167 120809264 -45841032 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 288 351 0 0 chrX 120809729 120809843 -45840453 + MurSAT1 Satellite Satellite 5 118 -2 4 1506 278 312 10 10 chrX 120810316 120810413 -45839883 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 237 373 0 0 chrX 120810882 120810992 -45839304 + MurSAT1 Satellite Satellite 9 118 -2 4 1506 268 323 10 10 chrX 120811465 120811562 -45838734 + MurSAT1 Satellite Satellite 1 97 -23 4 1506 243 308 13 13 chrX 120812435 120812514 -45837782 + MurSAT1 Satellite Satellite 2 80 -40 4 1506 286 265 80 29 chrX 120812533 120812676 -45837620 + MurSAT1 Satellite Satellite 1 150 -28 4 1506 253 259 0 0 chrX 120812939 120812997 -45837299 + MurSAT1 Satellite Satellite 35 92 -28 4 1506 268 278 19 19 chrX 120813256 120813378 -45836918 + MurSAT1 Satellite Satellite 1 122 -1 4 1506 294 326 11 11 chrX 120813701 120813831 -45836465 + MurSAT1 Satellite Satellite 1 130 -1 4 1506 266 328 9 9 chrX 120813867 120813981 -45836315 + MurSAT1 Satellite Satellite 6 119 -1 4 1506 302 324 0 0 chrX 120814606 120814715 -45835581 + MurSAT1 Satellite Satellite 1 116 -4 5 1506 360 292 22 22 chrX 120815119 120815406 -45834890 + MurSAT1 Satellite Satellite 1 287 -1 5 1506 285 355 9 9 chrX 120815618 120815824 -45834472 + MurSAT1 Satellite Satellite 1 206 -3 5 1506 286 312 9 9 chrX 120816181 120816291 -45834005 + MurSAT1 Satellite Satellite 1 110 -10 5 1506 258 330 5 5 chrX 120816696 120816839 -45833457 + MurSAT1 Satellite Satellite 1 143 -2 5 1506 277 278 7 7 chrX 120817311 120817415 -45832881 + MurSAT1 Satellite Satellite 1 104 -19 5 1506 229 333 0 0 chrX 120817462 120817543 -45832753 + MurSAT1 Satellite Satellite 7 87 -33 5 1506 852 168 14 0 chrX 120820088 120820231 -45830065 + B1_Mus1 SINE Alu 4 148 0 5 1506 872 150 0 6 chrX 120820232 120820393 -45829903 + GA-rich Low_complexity Low_complexity 2 161 0 5 1506 198 0 0 0 chrX 120820444 120820466 -45829830 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1506 198 0 0 0 chrX 120820522 120820544 -45829752 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 5 1506 28 0 0 0 chrX 120820636 120820664 -45829632 + AT_rich Low_complexity Low_complexity 1 28 0 5 1506 919 131 14 7 chrX 120820757 120820903 -45829393 + B1_Mus1 SINE Alu 2 148 0 5 1506 703 126 0 16 chrX 120820905 120821034 -45829262 + (GAAA)n Simple_repeat Simple_repeat 2 128 0 5 1506 839 175 7 0 chrX 120821357 120821494 -45828802 + B1_Mus1 SINE Alu 3 140 -8 5 1506 714 82 0 0 chrX 120821515 120821613 -45828683 + (GAAA)n Simple_repeat Simple_repeat 2 99 0 5 1506 234 0 0 0 chrX 120821645 120821671 -45828625 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1506 279 0 0 0 chrX 120821739 120821770 -45828526 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1506 285 240 32 8 chrX 120821839 120821965 -45828331 + T-rich Low_complexity Low_complexity 1 129 0 5 1506 885 171 0 7 chrX 120821981 120822128 -45828168 + B1_Mus1 SINE Alu 3 148 0 5 1506 229 94 18 36 chrX 120822131 120822186 -45828110 + (CAAAA)n Simple_repeat Simple_repeat 1 54 0 5 1506 240 250 0 0 chrX 120822290 120822374 -45827922 + T-rich Low_complexity Low_complexity 1 84 0 5 1506 210 105 0 0 chrX 120822427 120822465 -45827831 + (T)n Simple_repeat Simple_repeat 1 38 0 5 1506 23 0 0 0 chrX 120822517 120822540 -45827756 + AT_rich Low_complexity Low_complexity 1 23 0 5 1506 891 171 7 0 chrX 120822574 120822720 -45827576 + B1_Mus1 SINE Alu 2 148 0 5 1506 732 195 11 6 chrX 120822720 120822895 -45827401 + GA-rich Low_complexity Low_complexity 2 177 0 5 1506 206 238 0 48 chrX 120823137 120823221 -45827075 + T-rich Low_complexity Low_complexity 3 82 0 5 1506 925 131 14 14 chrX 120823227 120823374 -45826922 + B1_Mus1 SINE Alu 2 148 0 5 1506 615 149 0 0 chrX 120823386 120823493 -45826803 + (GAA)n Simple_repeat Simple_repeat 2 108 0 5 1506 334 196 11 11 chrX 120823489 120823532 -45826764 + polypurine Low_complexity Low_complexity 2 44 0 5 1506 1040 139 0 11 chrX 120823532 120823714 -45826582 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 1506 334 196 11 11 chrX 120823714 120823763 -45826533 + polypurine Low_complexity Low_complexity 45 94 0 5 1506 261 0 0 0 chrX 120823997 120824026 -45826270 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1506 834 153 22 14 chrX 120824095 120824234 -45826062 + B1_Mus1 SINE Alu 2 141 -7 5 1506 207 0 0 0 chrX 120824238 120824261 -45826035 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 5 1506 310 160 26 77 chrX 120824423 120824579 -45825717 + (TTA)n Simple_repeat Simple_repeat 3 150 0 5 1506 279 0 0 0 chrX 120825187 120825218 -45825078 + (TTA)n Simple_repeat Simple_repeat 1 31 0 5 1506 282 56 0 0 chrX 120825363 120825399 -45824897 + (A)n Simple_repeat Simple_repeat 1 36 0 5 1506 21 0 0 0 chrX 120825699 120825720 -45824576 + AT_rich Low_complexity Low_complexity 1 21 0 5 1506 22 0 0 0 chrX 120825743 120825765 -45824531 + AT_rich Low_complexity Low_complexity 1 22 0 5 1506 180 0 0 0 chrX 120826212 120826232 -45824064 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1506 189 0 0 0 chrX 120826437 120826458 -45823838 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1506 21 36 0 0 chrX 120826728 120826756 -45823540 + AT_rich Low_complexity Low_complexity 1 28 0 5 1506 236 143 0 67 chrX 120827034 120827109 -45823187 + A-rich Low_complexity Low_complexity 1 70 0 5 1506 216 0 0 0 chrX 120827896 120827920 -45822376 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1506 351 0 0 0 chrX 120828253 120828292 -45822004 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 1506 210 37 0 0 chrX 120828327 120828354 -45821942 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 5 1506 21 0 0 0 chrX 120828461 120828482 -45821814 + AT_rich Low_complexity Low_complexity 1 21 0 5 1506 187 31 62 0 chrX 120828605 120828637 -45821659 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1506 249 33 0 0 chrX 120828745 120828775 -45821521 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 5 1506 180 0 0 0 chrX 120828938 120828958 -45821338 + (TTA)n Simple_repeat Simple_repeat 2 21 0 5 1506 983 56 0 0 chrX 120829004 120829130 -45821166 + B1_Mus2 SINE Alu 12 137 -10 5 1506 470 17 0 17 chrX 120829130 120829190 -45821106 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 5 1506 207 0 0 0 chrX 120829231 120829254 -45821042 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 5 1506 378 0 0 0 chrX 120829281 120829323 -45820973 + (TTG)n Simple_repeat Simple_repeat 1 42 0 5 1506 22 0 0 0 chrX 120829323 120829345 -45820951 + AT_rich Low_complexity Low_complexity 1 22 0 5 1506 1152 79 0 0 chrX 120829380 120829520 -45820776 + B1_Mus1 SINE Alu 2 141 -7 5 1506 297 0 0 0 chrX 120829523 120829556 -45820740 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 5 1506 243 61 0 0 chrX 120830395 120830428 -45819868 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1506 1236 48 7 0 chrX 120830730 120830875 -45819421 + B1_Mus2 SINE Alu 2 147 0 5 1506 185 108 0 26 chrX 120831099 120831137 -45819159 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 5 1506 1093 109 0 0 chrX 120831219 120831366 -45818930 + B1_Mus1 SINE Alu 2 148 0 5 1506 194 0 39 0 chrX 120831366 120831392 -45818904 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 5 1506 187 87 43 21 chrX 120831480 120831527 -45818769 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 5 1506 240 100 0 0 chrX 120831635 120831675 -45818621 + (A)n Simple_repeat Simple_repeat 1 40 0 5 1506 222 37 0 0 chrX 120831886 120831913 -45818383 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 5 1506 235 0 57 0 chrX 120832033 120832068 -45818228 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 5 1506 183 42 0 0 chrX 120832128 120832152 -45818144 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 5 1506 318 67 0 0 chrX 120832422 120832467 -45817829 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1506 254 44 0 161 chrX 120832585 120832666 -45817630 + A-rich Low_complexity Low_complexity 1 68 0 5 1506 301 317 111 70 chrX 120833614 120834011 -45816285 + L1MD LINE L1 3068 3480 -2666 5 1506 343 19 36 36 chrX 120834036 120834092 -45816204 + (CAAAAA)n Simple_repeat Simple_repeat 4 59 0 5 1506 193 89 22 22 chrX 120834197 120834243 -45816053 + (TTTTTG)n Simple_repeat Simple_repeat 4 49 0 5 1506 3362 134 20 0 chrX 120836035 120836634 -45813662 + L1_Mur1 LINE L1 1429 2039 -3847 5 1506 2525 126 5 0 chrX 120837027 120837455 -45812841 + L1_Mur1 LINE L1 2086 2515 -3371 5 1506 1668 189 32 64 chrX 120837455 120837861 -45812435 + RLTR9C LTR ERVK 1 393 0 5 1506 3757 199 27 107 chrX 120837870 120839131 -45811165 + MMETn-int LTR ERVK 10 1169 -3675 5 1506 2244 191 22 20 chrX 120839148 120839649 -45810647 + ETnERV2-int LTR ERVK 2496 2997 -4409 5 1506 903 152 0 18 chrX 120839649 120839817 -45810479 + RLTR13D1 LTR ERVK 486 650 -156 5 1506 3554 184 27 33 chrX 120840377 120841836 -45808460 + ETnERV2-int LTR ERVK 2357 4085 -3321 5 1506 2405 59 23 0 chrX 120841841 120842148 -45808148 - IAPLTR2b LTR ERVK -13 314 1 5 1506 12728 84 12 9 chrX 120842148 120843968 -45806328 - IAPEz-int LTR ERVK 0 6481 4656 5 1506 1785 71 4 0 chrX 120843967 120844206 -45806090 - IAPEY3-int LTR ERVK -5183 2497 2258 5 1506 379 105 0 0 chrX 120844211 120844268 -45806028 - B1_Mus1 SINE Alu -91 57 1 5 1506 4380 132 87 62 chrX 120844268 120845199 -45805097 - IAPEz-int LTR ERVK -5486 995 1 5 1506 2191 83 23 3 chrX 120845219 120845521 -45804775 - IAPLTR2b LTR ERVK -19 308 1 5 1506 1032 227 13 53 chrX 120845530 120846118 -45804178 + ETnERV2-int LTR ERVK 2901 3746 -1098 5 1506 422 118 0 26 chrX 120846328 120846406 -45803890 + ETnERV2-int LTR ERVK 7327 7402 -4 5 1506 1603 194 54 88 chrX 120846411 120846818 -45803478 + RLTR9C LTR ERVK 1 393 0 5 1506 10896 140 36 5 chrX 120846818 120848375 -45801921 + L1_Mur1 LINE L1 2510 4122 -1764 5 188 315 0 0 0 chrX 120848375 120848410 -45801886 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1507 10896 140 36 5 chrX 120848410 120848940 -45801356 + L1_Mur1 LINE L1 4123 4661 -1225 5 1507 315 0 0 0 chrX 120848940 120848975 -45801321 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1507 225 208 0 0 chrX 120848975 120849023 -45801273 + L1_Mur1 LINE L1 4655 4702 -1184 5 1507 1813 147 3 10 chrX 120849025 120849328 -45800968 + RLTR22_Mus LTR ERVK 3 303 -1505 5 1507 559 64 0 0 chrX 120849862 120849940 -45800356 + RLTR22_Mus LTR ERVK 294 371 -1437 5 1507 8242 106 2 3 chrX 120849943 120851887 -45798409 - L1_Mus2 LINE L1 0 6566 4623 5 1507 2922 56 3 0 chrX 120851888 120852244 -45798052 - IAPEY2_LTR LTR ERVK 0 357 1 5 1507 3882 109 21 7 chrX 120852244 120852853 -45797443 - IAPEy-int LTR ERVK 0 7513 6896 5 1507 448 51 0 0 chrX 120852853 120852912 -45797384 - IAPEY3-int LTR ERVK -2770 4910 4852 5 1507 3146 89 11 0 chrX 120852905 120853352 -45796944 - IAPEY3-int LTR ERVK -4991 2689 2238 5 1507 8690 136 13 23 chrX 120853329 120854956 -45795340 - IAPEY3-int LTR ERVK -5698 1982 22 5 1507 2624 71 62 0 chrX 120854956 120855292 -45795004 - IAPEY2_LTR LTR ERVK 0 357 1 5 1507 13937 142 6 5 chrX 120855292 120857790 -45792506 - L1_Mus2 LINE L1 -1256 4627 2128 5 1507 404 91 0 0 chrX 120857795 120857861 -45792435 + L1_Mm LINE L1 3661 3726 -2157 5 1507 2063 114 18 32 chrX 120857870 120858243 -45792053 + RLTR22_Mus LTR ERVK 354 832 -1016 5 1507 207 0 0 0 chrX 120858243 120858266 -45792030 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1507 275 153 81 27 chrX 120858424 120858445 -45791851 - PB1D9 SINE Alu -2 118 96 5 1507 1248 84 0 11 chrX 120858445 120858626 -45791670 + L1Md_F2 LINE L1 6392 6570 -12 5 1507 275 153 81 27 chrX 120858626 120858678 -45791618 - PB1D9 SINE Alu -25 95 41 5 1507 567 107 0 0 chrX 120858678 120858710 -45791586 - 4.5SRNA scRNA scRNA -4 90 7 5 1507 1072 42 0 0 chrX 120858710 120858852 -45791444 + L1_Mm LINE L1 3275 3416 -2467 5 1507 6643 150 23 43 chrX 120858852 120859106 -45791190 + Lx3A LINE L1 5770 6022 -959 5 1507 243 0 0 0 chrX 120859106 120859133 -45791163 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 5 1507 6643 150 23 43 chrX 120859133 120860109 -45790187 + Lx3A LINE L1 6023 6974 -7 5 1507 404 35 0 34 chrX 120860112 120860171 -45790125 + (TAAA)n Simple_repeat Simple_repeat 1 57 0 5 1507 671 24 12 0 chrX 120860220 120860305 -45789991 + (TC)n Simple_repeat Simple_repeat 1 86 0 5 1507 443 239 11 0 chrX 120861317 120861405 -45788891 + ID_B1 SINE B4 135 223 -1 5 1507 246 402 108 0 chrX 120861627 120861729 -45788567 + B3A SINE B2 69 181 -17 5 1507 225 0 0 0 chrX 120861731 120861756 -45788540 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 1507 709 325 19 9 chrX 120862086 120862297 -45787999 - ID_B1 SINE B4 -8 216 4 6 1507 760 265 36 27 chrX 120862384 120862605 -45787691 + MTD LTR MaLR 3 225 -194 6 1507 248 102 20 0 chrX 120862616 120862665 -45787631 + (CAAAAA)n Simple_repeat Simple_repeat 3 52 0 6 1507 378 361 20 20 chrX 120862681 120862828 -45787468 + RSINE1 SINE B4 4 150 -15 6 1507 555 16 0 0 chrX 120862834 120862898 -45787398 + (TAA)n Simple_repeat Simple_repeat 3 66 0 6 1507 678 319 35 103 chrX 120863064 120863434 -45786862 - MTE2a LTR MaLR -34 345 1 6 1507 1328 315 142 103 chrX 120863439 120864631 -45785665 - MTE2a-int LTR MaLR -137 1443 37 6 1507 300 305 175 14 chrX 120864832 120865181 -45785115 - Lx9 LINE L1 -15 7629 7225 6 1507 321 256 37 81 chrX 120865238 120865374 -45784922 - Lx9 LINE L1 -553 7091 6962 6 1507 8017 40 5 1 chrX 120865671 120866650 -45783646 + L1Md_A LINE L1 5599 6581 -1 6 1507 13535 47 5 14 chrX 120866650 120869410 -45780886 - L1Md_A LINE L1 -2920 2963 232 6 1507 1445 251 44 14 chrX 120870004 120870440 -45779856 - Lx2B LINE L1 -17 6983 6535 6 1507 791 158 26 7 chrX 120870442 120870595 -45779701 - Lx2B LINE L1 -689 6311 6156 6 1507 416 325 16 24 chrX 120870618 120870741 -45779555 - B3 SINE B2 -93 123 2 6 1507 1057 89 0 52 chrX 120870974 120871128 -45779168 + B1_Mm SINE Alu 2 147 0 6 1507 504 132 0 0 chrX 120871128 120871234 -45779062 + (A)n Simple_repeat Simple_repeat 1 106 0 6 1507 251 93 0 23 chrX 120871423 120871467 -45778829 + (TATG)n Simple_repeat Simple_repeat 4 46 0 6 1507 1110 258 56 85 chrX 120872286 120872676 -45777620 - ORR1C2 LTR MaLR 0 384 6 6 1507 801 175 0 0 chrX 120872688 120872842 -45777454 - Lx2 LINE L1 0 6997 6844 6 1507 1863 185 3 8 chrX 120872842 120873228 -45777068 + Lx2 LINE L1 5904 6287 -710 6 1507 207 224 0 39 chrX 120873256 120873269 -45777027 + polypyrimidine Low_complexity Low_complexity 38 49 0 6 1507 380 63 32 0 chrX 120873269 120873332 -45776964 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 6 1507 207 224 0 39 chrX 120873332 120873369 -45776927 + polypyrimidine Low_complexity Low_complexity 1 37 0 6 1507 291 122 0 0 chrX 120873404 120873453 -45776843 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1507 540 301 37 0 chrX 120873477 120873613 -45776683 - RSINE1 SINE B4 -22 143 3 6 1507 318 50 0 0 chrX 120873729 120873769 -45776527 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 6 1507 231 189 19 19 chrX 120873809 120873863 -45776433 + ORR1D2 LTR MaLR 1 54 -324 6 1507 840 271 97 94 chrX 120873897 120874239 -45776057 + ORR1D2 LTR MaLR 24 366 -4 6 1507 377 269 87 15 chrX 120874308 120874504 -45775792 + L1MD3 LINE L1 7773 7982 -13 6 1507 2330 272 28 24 chrX 120875202 120875331 -45774965 - RMER1B Other Other -4 1062 929 6 1507 1914 55 0 0 chrX 120875331 120875567 -45774729 + L1Md_F2 LINE L1 6328 6563 -19 6 1507 2330 272 28 24 chrX 120875567 120876142 -45774154 - RMER1B Other Other -138 928 355 6 1507 856 281 55 41 chrX 120876110 120876455 -45773841 - RMER1A Other Other -575 455 106 6 1507 1156 256 18 21 chrX 120876458 120876738 -45773558 + ORR1B1 LTR MaLR 116 394 0 6 1507 1673 251 53 136 chrX 120876789 120877393 -45772903 - RLTR1D LTR ERV1 0 605 52 6 1507 864 177 19 18 chrX 120877586 120877829 -45772467 + Lx3C LINE L1 5889 6133 -867 6 1507 672 141 30 21 chrX 120877834 120877979 -45772317 + RMER17D2 LTR ERVK 703 906 0 6 1507 447 299 54 70 chrX 120879448 120879819 -45770477 + MuLV-int LTR ERV1 7095 7459 -147 6 1507 481 94 35 41 chrX 120880619 120880764 -45769532 + A-rich Low_complexity Low_complexity 1 144 0 6 1507 230 0 33 0 chrX 120880764 120880794 -45769502 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 6 1507 2255 152 26 26 chrX 120880795 120880922 -45769374 + Lx3_Mus LINE L1 5789 5913 -1096 6 1507 234 0 0 0 chrX 120880922 120880948 -45769348 + (CAAAC)n Simple_repeat Simple_repeat 5 30 0 6 1507 2255 152 26 26 chrX 120880948 120881272 -45769024 + Lx3_Mus LINE L1 5914 6240 -769 6 1507 4696 114 11 1 chrX 120881268 120882013 -45768283 - L1_Mm LINE L1 -180 5703 4952 6 1507 316 309 0 0 chrX 120882109 120882190 -45768106 - ORR1D2 LTR MaLR -284 86 6 6 1507 920 288 96 32 chrX 120882509 120882892 -45767404 + MT2A LTR ERVL 1 528 -73 6 1507 318 26 0 0 chrX 120882897 120882936 -45767360 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1507 2547 31 2 271 chrX 120882963 120883497 -45766799 - RLTR10 LTR ERVK 0 390 1 6 1507 15522 29 1 29 chrX 120883499 120885500 -45764796 - RLTR10-int LTR ERVK -3 1984 41 6 1507 2049 215 53 13 chrX 120885629 120886101 -45764195 - Lx2B LINE L1 -6 6994 6504 6 1507 659 197 6 44 chrX 120886117 120886276 -45764020 + L1_Mur1 LINE L1 5405 5557 -329 6 1507 6553 96 4 8 chrX 120886287 120887580 -45762716 - L1Md_F2 LINE L1 -3 6579 5294 6 1507 2075 75 0 7 chrX 120887580 120887863 -45762433 - L1Md_F2 LINE L1 -2 6580 6300 6 1507 7032 92 6 4 chrX 120887863 120888949 -45761347 - L1Md_F LINE L1 -4498 1385 294 6 1507 586 253 32 48 chrX 120888942 120889009 -45761287 + Lx2B LINE L1 5535 5597 -280 6 1507 3399 33 2 0 chrX 120889009 120889404 -45760892 - MTA_Mm LTR MaLR 0 396 1 6 1507 9086 39 2 1 chrX 120889404 120890501 -45759795 - MTA_Mm-int LTR MaLR 0 1098 1 6 1507 3419 30 2 0 chrX 120890501 120890896 -45759400 - MTA_Mm LTR MaLR 0 396 1 6 1507 586 253 32 48 chrX 120890896 120891013 -45759283 + Lx2B LINE L1 5598 5716 -161 6 1507 322 194 68 120 chrX 120891014 120891131 -45759165 + MT2B LTR ERVL 154 264 -337 6 1507 637 121 10 0 chrX 120891065 120891164 -45759132 + B1_Mus2 SINE Alu 47 146 -1 6 1507 258 57 18 36 chrX 120891169 120891224 -45759072 + (CAAAAA)n Simple_repeat Simple_repeat 4 57 0 6 1507 2503 171 11 50 chrX 120891228 120891763 -45758533 + Lx2B LINE L1 5769 6282 -718 6 1507 333 303 30 10 chrX 120891958 120892058 -45758238 + RSINE1 SINE B4 56 157 -8 6 1507 298 156 0 0 chrX 120892116 120892161 -45758135 - L1_Mur3 LINE L1 -2356 3524 3480 6 1507 2686 65 3 0 chrX 120892358 120892711 -45757585 - RLTR13A LTR ERVK -501 354 1 6 1507 5957 56 9 2 chrX 120892927 120893718 -45756578 + MTA_Mm-int LTR MaLR 303 1098 0 6 1507 3038 38 67 0 chrX 120893718 120894089 -45756207 + MTA_Mm LTR MaLR 1 396 0 6 1507 4106 192 2 4 chrX 120894116 120894914 -45755382 - L1_Mus3 LINE L1 -526 5357 4561 6 1507 2704 156 2 31 chrX 120894912 120895400 -45754896 + L1_Mus3 LINE L1 5365 5782 -101 6 1507 951 109 0 14 chrX 120895400 120895540 -45754756 - B1_Mm SINE Alu -9 138 1 6 1507 5744 120 3 11 chrX 120895540 120896427 -45753869 + L1_Mus3 LINE L1 5771 6626 -12 6 1507 3607 212 62 72 chrX 120896436 120897958 -45752338 + RMER17C-int LTR ERVK 1946 3238 0 6 1507 229 246 42 121 chrX 120897958 120898225 -45752071 + RMER17A2 LTR ERVK 2 431 -475 6 1507 326 287 0 22 chrX 120898371 120898460 -45751836 + B4A SINE B4 206 292 0 6 1507 1028 336 34 48 chrX 120898554 120899174 -45751122 + RMER15-int LTR ERVL 1145 1755 -3244 6 1507 643 342 53 11 chrX 120899189 120899547 -45750749 + MTE2b LTR MaLR 5 377 -2 6 1507 585 321 10 25 chrX 120899555 120899756 -45750540 + MTE2b-int LTR MaLR 6 203 -1377 6 1507 1369 298 20 15 chrX 120899764 120900169 -45750127 - MTD LTR MaLR -12 407 1 6 1507 503 335 27 5 chrX 120900174 120900360 -45749936 + MTE2b-int LTR MaLR 213 402 -1178 6 1507 755 323 66 16 chrX 120900376 120900681 -45749615 + MTE2b-int LTR MaLR 553 872 -708 6 1507 740 325 55 45 chrX 120900732 120901044 -45749252 + ORR1D2 LTR MaLR 1 315 -55 6 1507 278 316 46 134 chrX 120901046 120901240 -45749056 - RLTR24 LTR ERV1 -75 454 278 6 1507 3223 196 52 49 chrX 120901241 120902421 -45747875 + Lx5 LINE L1 5176 6380 -670 6 1507 440 240 10 0 chrX 120902422 120902522 -45747774 - RMER19A LTR ERVK -1 736 636 6 1507 1581 289 61 50 chrX 120902594 120903258 -45747038 + ORR1D2-int LTR MaLR 21 666 -914 6 1507 582 15 0 0 chrX 120903264 120903331 -45746965 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 6 1507 378 0 0 0 chrX 120903578 120903620 -45746676 + (A)n Simple_repeat Simple_repeat 1 42 0 6 1507 1114 247 149 42 chrX 120903960 120904433 -45745863 + ORR1D2-int LTR MaLR 825 1347 -23 6 1507 310 326 46 59 chrX 120904808 120904961 -45745335 + RLTR14 LTR ERV1 224 374 -8 6 1507 3401 197 13 90 chrX 120906008 120906778 -45743518 + RMER6D LTR ERVK 1 711 -9 6 1507 254 308 7 29 chrX 120907520 120907657 -45742639 + GA-rich Low_complexity Low_complexity 2 135 0 6 1507 336 143 0 0 chrX 120907704 120907760 -45742536 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 6 1507 2177 209 104 8 chrX 120908261 120908791 -45741505 - Lx3C LINE L1 -5 6971 6391 6 1507 3902 151 13 10 chrX 120908791 120909462 -45740834 - L1_Mus3 LINE L1 0 6638 5966 6 1507 12245 154 49 2 chrX 120909462 120911812 -45738484 + L1_Mus3 LINE L1 3466 5940 -698 6 1507 12912 169 27 16 chrX 120911810 120914828 -45735468 - Lx3C LINE L1 -568 6408 3363 6 1507 582 318 74 31 chrX 120914829 120915153 -45735143 + MTE-int LTR MaLR 1243 1580 0 6 1507 935 315 15 11 chrX 120915241 120915501 -45734795 + MTE2b LTR MaLR 119 379 0 6 1507 750 369 0 75 chrX 120915754 120915866 -45734430 + B4A SINE B4 11 117 -175 6 1507 1110 72 0 7 chrX 120915866 120916021 -45734275 - L1Md_F2 LINE L1 -13 6569 6416 6 1507 750 369 0 75 chrX 120916021 120916213 -45734083 + B4A SINE B4 118 292 0 6 1507 265 399 25 0 chrX 120916234 120916392 -45733904 + RMER15-int LTR ERVL 2002 2163 -2836 6 1507 645 280 28 0 chrX 120916704 120916918 -45733378 - URR1B DNA MER1_type -4 221 2 6 1507 1013 352 50 44 chrX 120916918 120917646 -45732650 + RMER15-int LTR ERVL 4261 4992 -7 6 1507 481 353 98 35 chrX 120918280 120918618 -45731678 - L2a LINE L2 -84 3342 2984 6 1507 199 372 19 10 chrX 120918766 120918869 -45731427 - L2a LINE L2 -949 2470 2367 6 1507 252 114 0 0 chrX 120919150 120919185 -45731111 - L1_Mur1 LINE L1 -315 5571 5537 6 1507 320 300 8 15 chrX 120919280 120919412 -45730884 + GA-rich Low_complexity Low_complexity 1 131 0 6 1507 334 297 0 35 chrX 120919443 120919586 -45730710 + GA-rich Low_complexity Low_complexity 2 139 0 6 1507 266 328 22 22 chrX 120919699 120919877 -45730419 + CT-rich Low_complexity Low_complexity 2 179 0 6 1507 203 348 0 27 chrX 120919956 120920139 -45730157 + CT-rich Low_complexity Low_complexity 2 179 0 6 1507 336 314 6 25 chrX 120920434 120920597 -45729699 + GA-rich Low_complexity Low_complexity 2 161 0 6 1507 747 130 0 0 chrX 120920597 120920720 -45729576 + (GAAA)n Simple_repeat Simple_repeat 3 125 0 6 1507 208 250 0 30 chrX 120920861 120920927 -45729369 + CT-rich Low_complexity Low_complexity 1 64 0 6 1507 180 152 0 0 chrX 120920956 120920989 -45729307 + CT-rich Low_complexity Low_complexity 2 34 0 6 1507 363 328 6 11 chrX 120921308 120921484 -45728812 + CT-rich Low_complexity Low_complexity 2 176 0 6 1507 760 77 8 8 chrX 120921556 120921674 -45728622 + (TA)n Simple_repeat Simple_repeat 2 119 0 6 1507 198 91 0 0 chrX 120921674 120921706 -45728590 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1507 426 325 0 18 chrX 120921711 120921874 -45728422 + CT-rich Low_complexity Low_complexity 1 160 0 6 1507 365 351 6 15 chrX 120922078 120922421 -45727875 + GA-rich Low_complexity Low_complexity 1 339 0 6 1507 313 284 19 26 chrX 120922676 120922963 -45727333 + GA-rich Low_complexity Low_complexity 1 284 0 6 1507 337 267 113 49 chrX 120923072 120923214 -45727082 - HAL1-3A_ME LINE L1 -417 2441 2291 6 1507 360 356 11 14 chrX 120923263 120923525 -45726771 + CT-rich Low_complexity Low_complexity 1 261 0 6 1507 458 33 0 16 chrX 120923564 120923625 -45726671 + (TC)n Simple_repeat Simple_repeat 1 60 0 6 1507 300 285 75 68 chrX 120923639 120923786 -45726510 - HAL1-3A_ME LINE L1 -419 2439 2292 6 1507 252 332 7 25 chrX 120923790 120923997 -45726299 + CT-rich Low_complexity Low_complexity 1 203 0 6 1507 270 354 7 24 chrX 120924040 120924264 -45726032 + GA-rich Low_complexity Low_complexity 1 220 0 7 1507 218 185 12 36 chrX 120924291 120924375 -45725921 + GA-rich Low_complexity Low_complexity 5 86 0 7 1507 359 234 18 35 chrX 120924413 120924697 -45725599 + GA-rich Low_complexity Low_complexity 1 278 0 7 1507 207 270 17 17 chrX 120924763 120924940 -45725356 + GA-rich Low_complexity Low_complexity 1 177 0 7 1507 459 0 0 0 chrX 120926204 120926255 -45724041 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1507 203 161 0 18 chrX 120927586 120927643 -45722653 + T-rich Low_complexity Low_complexity 5 60 0 7 1507 238 146 20 40 chrX 120927732 120927782 -45722514 - MT2B2 LTR ERVL 0 584 536 7 1507 335 141 16 0 chrX 120927796 120927860 -45722436 + CT-rich Low_complexity Low_complexity 2 66 0 7 1507 855 74 4 0 chrX 120927910 120928029 -45722267 + L1_Mus4 LINE L1 5657 5795 -496 7 1507 4345 22 0 0 chrX 120928029 120928522 -45721774 - MT2_Mm LTR ERVL 0 493 1 7 1507 314 0 0 0 chrX 120928522 120928560 -45721736 - MERVL-int LTR ERVL 0 5485 5448 7 1507 336 202 46 35 chrX 120928560 120928647 -45721649 - ORR1A3-int LTR MaLR -1323 640 553 7 1507 47496 14 6 0 chrX 120928647 120933973 -45716323 - MERVL-int LTR ERVL -125 5360 1 7 1507 4368 20 0 0 chrX 120933973 120934466 -45715830 - MT2_Mm LTR ERVL 0 493 1 7 1507 5727 121 7 1 chrX 120934466 120935338 -45714958 + L1_Mus3 LINE L1 5759 6635 -3 7 1507 196 91 22 22 chrX 120935451 120935496 -45714800 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1507 737 313 0 30 chrX 120936182 120936383 -45713913 + B3 SINE B2 17 211 -5 7 1507 524 151 10 31 chrX 120936577 120936673 -45713623 + RLTR9C LTR ERVK 300 393 0 7 1507 317 255 19 56 chrX 120936674 120936782 -45713514 + MMETn-int LTR ERVK 1 104 -4740 7 1507 568 227 35 88 chrX 120936817 120937044 -45713252 + MMETn-int LTR ERVK 108 322 -4522 7 1507 3298 187 77 66 chrX 120937022 120937951 -45712345 + MMETn-int LTR ERVK 353 1631 -5775 7 1507 2238 196 21 39 chrX 120937978 120938489 -45711807 + MMETn-int LTR ERVK 2496 2997 -4409 7 1507 913 146 0 18 chrX 120938489 120938657 -45711639 + RLTR13D1 LTR ERVK 486 650 -156 7 1507 3611 188 31 35 chrX 120939214 120940682 -45709614 + ETnERV2-int LTR ERVK 2357 4085 -3321 7 1507 447 118 0 26 chrX 120940761 120940839 -45709457 + ETnERV2-int LTR ERVK 7327 7402 -4 7 1507 1568 197 54 88 chrX 120940841 120941248 -45709048 + RLTR9C LTR ERVK 1 393 0 7 1507 6859 143 54 5 chrX 120941248 120942540 -45707756 + L1_Mur1 LINE L1 2510 3865 -2021 7 1507 1006 151 0 10 chrX 120942538 120942732 -45707564 + L1_Mur1 LINE L1 4511 4702 -1184 7 1507 2282 127 22 6 chrX 120942734 120943097 -45707199 + RLTR22_Mus LTR ERVK 3 371 -1437 7 1507 16931 115 3 7 chrX 120943104 120946451 -45703845 - L1_Mus2 LINE L1 0 6566 3236 7 1507 2976 48 3 0 chrX 120946451 120946833 -45703463 - L1Md_F2 LINE L1 -643 5939 5551 7 1507 5048 71 0 6 chrX 120946834 120947502 -45702794 + L1Md_F2 LINE L1 5907 6570 -12 7 1507 585 95 0 0 chrX 120947502 120947586 -45702710 - 4.5SRNA scRNA scRNA -4 90 7 7 1507 1109 43 0 0 chrX 120947586 120947727 -45702569 + L1_Mm LINE L1 3275 3415 -2468 7 1507 7020 140 12 33 chrX 120947727 120948960 -45701336 + Lx3A LINE L1 5769 6975 -6 7 1507 212 54 0 51 chrX 120948963 120949002 -45701294 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 7 1507 540 0 0 0 chrX 120949052 120949112 -45701184 + (TC)n Simple_repeat Simple_repeat 2 61 0 7 1507 452 225 11 0 chrX 120950134 120950223 -45700073 + ID_B1 SINE B4 135 224 0 7 1507 313 331 216 13 chrX 120950394 120950537 -45699759 + B3A SINE B2 8 183 -15 7 1507 312 27 0 0 chrX 120950537 120950574 -45699722 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1507 641 300 29 10 chrX 120950905 120951114 -45699182 - ID_B1 SINE B4 -8 216 4 7 1507 1499 275 30 17 chrX 120951201 120951608 -45698688 + MTD LTR MaLR 3 414 -5 7 1507 263 319 26 26 chrX 120951699 120951815 -45698481 + PB1D10 SINE Alu 2 117 0 7 1507 255 31 0 0 chrX 120951815 120951847 -45698449 + (CAAAAA)n Simple_repeat Simple_repeat 1 32 0 7 1507 387 341 15 23 chrX 120951865 120951997 -45698299 + RSINE1 SINE B4 4 134 -31 7 1507 214 29 0 54 chrX 120952019 120952056 -45698240 + (TAA)n Simple_repeat Simple_repeat 3 37 0 7 1507 2010 77 35 16 chrX 120952341 120952657 -45697639 + RLTRETN_Mm LTR ERVK 1 322 0 7 1507 25864 78 16 14 chrX 120952657 120959067 -45691229 + MMETn-int LTR ERVK 1 7124 -282 7 1507 2007 77 31 16 chrX 120959067 120959384 -45690912 + RLTRETN_Mm LTR ERVK 1 322 0 7 1507 421 287 36 149 chrX 120959412 120959633 -45690663 - MTE2a LTR MaLR -183 196 1 7 1507 1554 321 153 40 chrX 120959634 120960386 -45689910 - MTE2a-int LTR MaLR -1 1579 743 7 1507 1023 322 45 30 chrX 120960361 120960831 -45689465 - MTE2a-int LTR MaLR -946 634 37 7 1507 30 27 0 0 chrX 120961010 120961047 -45689249 + AT_rich Low_complexity Low_complexity 1 37 0 7 1507 450 36 0 0 chrX 120961144 120961200 -45689096 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1507 302 327 63 19 chrX 120961217 120961423 -45688873 - Lx9 LINE L1 -205 7439 7225 7 1507 426 244 35 78 chrX 120961477 120961619 -45688677 - Lx9 LINE L1 -547 7097 6962 7 1507 198 0 0 0 chrX 120962179 120962201 -45688095 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 7 1507 2850 56 53 3 chrX 120962472 120962849 -45687447 + MTA_Mm LTR MaLR 1 396 0 7 1507 207 0 0 0 chrX 120963153 120963176 -45687120 + (TTA)n Simple_repeat Simple_repeat 1 23 0 7 1507 246 128 0 0 chrX 120963268 120963307 -45686989 + (TC)n Simple_repeat Simple_repeat 2 40 0 7 1507 200 111 28 0 chrX 120963377 120963413 -45686883 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1507 714 78 0 0 chrX 120963413 120963515 -45686781 + (GA)n Simple_repeat Simple_repeat 2 103 0 7 1507 516 275 121 60 chrX 120963554 120963802 -45686494 - Lx7 LINE L1 -398 7298 7036 7 1507 347 239 0 32 chrX 120964712 120964807 -45685489 - RNLTR23 LTR ERVK 0 642 551 7 1507 375 106 0 0 chrX 120964807 120964873 -45685423 + (A)n Simple_repeat Simple_repeat 1 66 0 7 1507 22 0 0 0 chrX 120965263 120965285 -45685011 + AT_rich Low_complexity Low_complexity 1 22 0 7 1507 4558 108 5 99 chrX 120965691 120966531 -45683765 + L1Md_F LINE L1 360 1120 -5399 7 1507 4785 61 0 6 chrX 120966534 120967158 -45683138 + L1Md_F2 LINE L1 5963 6582 0 7 1507 1516 234 65 31 chrX 120967379 120967825 -45682471 - Lx2B LINE L1 -5 6995 6535 7 1507 781 173 26 7 chrX 120967829 120967980 -45682316 - Lx2B LINE L1 -691 6309 6156 7 1507 380 342 16 24 chrX 120968003 120968126 -45682170 - B3 SINE B2 -93 123 2 7 1507 1147 89 0 0 chrX 120968359 120968505 -45681791 + B1_Mm SINE Alu 2 147 0 7 1507 231 114 0 0 chrX 120968505 120968540 -45681756 + (A)n Simple_repeat Simple_repeat 1 35 0 7 1507 227 103 0 25 chrX 120968739 120968779 -45681517 + (TATG)n Simple_repeat Simple_repeat 4 42 0 7 1507 1151 254 57 83 chrX 120969600 120969987 -45680309 - ORR1C2 LTR MaLR 0 384 8 7 1507 719 188 0 7 chrX 120970003 120970158 -45680138 - Lx2 LINE L1 0 6997 6844 7 1507 1831 189 5 10 chrX 120970158 120970544 -45679752 + Lx2 LINE L1 5904 6287 -710 7 1507 262 185 12 12 chrX 120970571 120970653 -45679643 + CT-rich Low_complexity Low_complexity 1 82 0 7 1507 423 38 0 0 chrX 120970684 120970737 -45679559 + (TGG)n Simple_repeat Simple_repeat 1 53 0 7 1507 453 279 28 132 chrX 120970743 120970925 -45679371 - RSINE1 SINE B4 0 165 3 7 1507 393 58 0 0 chrX 120971041 120971093 -45679203 + (GGAA)n Simple_repeat Simple_repeat 2 53 0 7 1507 902 252 144 48 chrX 120971221 120971473 -45678823 + ORR1D2 LTR MaLR 24 304 -66 7 1507 188 0 74 0 chrX 120971473 120971500 -45678796 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 7 1507 902 252 144 48 chrX 120971500 120971560 -45678736 + ORR1D2 LTR MaLR 305 366 -4 7 1507 443 270 84 15 chrX 120971632 120971835 -45678461 + L1MD3 LINE L1 7766 7982 -13 7 1507 189 74 0 0 chrX 120972444 120972471 -45677825 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 1507 2666 278 67 18 chrX 120972738 120973724 -45676572 - RMER1B Other Other -4 1062 25 7 1507 1109 266 18 21 chrX 120973727 120974007 -45676289 + ORR1B1 LTR MaLR 116 394 0 7 1507 966 127 81 0 chrX 120974230 120974370 -45675926 + Lx3C LINE L1 5889 6028 -948 7 1507 846 30 0 0 chrX 120974370 120974471 -45675825 + (GA)n Simple_repeat Simple_repeat 2 102 0 7 1507 966 127 81 0 chrX 120974471 120974503 -45675793 + Lx3C LINE L1 6029 6073 -903 7 1507 655 141 30 21 chrX 120974507 120974652 -45675644 + RMER17D2 LTR ERVK 703 906 0 7 1507 701 317 81 60 chrX 120975959 120976493 -45673803 + RLTR6-int LTR ERV1 6943 7640 -138 7 1507 216 0 0 0 chrX 120977166 120977190 -45673106 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1507 288 179 0 0 chrX 120977286 120977364 -45672932 + A-rich Low_complexity Low_complexity 2 79 0 7 1507 2457 157 24 24 chrX 120977364 120977497 -45672799 + Lx3_Mus LINE L1 5784 5910 -1099 7 1507 216 0 0 0 chrX 120977497 120977521 -45672775 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 7 1507 2457 157 24 24 chrX 120977521 120977844 -45672452 + Lx3_Mus LINE L1 5911 6240 -769 7 1507 5096 110 7 1 chrX 120977840 120978584 -45671712 - L1_Mm LINE L1 -180 5703 4956 7 1507 297 321 0 0 chrX 120978687 120978768 -45671528 - ORR1D2 LTR MaLR -284 86 6 7 188 921 276 99 50 chrX 120979087 120979475 -45670821 + MT2A LTR ERVL 1 530 -54 7 1508 423 0 0 0 chrX 120979475 120979522 -45670774 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 1508 238 310 113 141 chrX 120979522 120979567 -45670729 + MT2A LTR ERVL 531 582 -2 7 1508 2476 195 52 16 chrX 120979667 120980167 -45670129 - Lx2B LINE L1 -6 6994 6477 7 1508 2803 214 16 11 chrX 120980158 120980773 -45669523 + Lx2B LINE L1 5104 5721 -165 7 1508 288 202 76 119 chrX 120980777 120980895 -45669401 + MT2B LTR ERVL 152 264 -337 7 1508 662 147 0 0 chrX 120980828 120980930 -45669366 + B1_Mus2 SINE Alu 46 147 0 7 1508 328 16 48 32 chrX 120980931 120980994 -45669302 + (CAAAAA)n Simple_repeat Simple_repeat 3 66 0 7 1508 191 61 0 29 chrX 120981028 120981062 -45669234 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 7 1508 2452 161 16 35 chrX 120981063 120981551 -45668745 + Lx2B LINE L1 5804 6282 -718 7 1508 276 356 11 0 chrX 120981756 120981843 -45668453 + RSINE1 SINE B4 68 155 -10 7 1508 256 200 0 0 chrX 120981901 120981946 -45668350 - L1_Mur3 LINE L1 -2356 3524 3480 7 1508 300 261 59 44 chrX 120982004 120982140 -45668156 - L1M2 LINE L1 -2692 3451 3314 7 1508 2636 74 3 0 chrX 120982141 120982494 -45667802 - RLTR13A LTR ERVK -501 354 1 7 1508 299 346 52 8 chrX 120983464 120983598 -45666698 - HAL1 LINE L1 -2198 309 170 7 1508 21 36 0 0 chrX 120983702 120983730 -45666566 + AT_rich Low_complexity Low_complexity 1 28 0 7 1508 757 247 7 23 chrX 120983763 120983961 -45666335 + RLTR20B3 LTR ERVK 1 231 -346 7 1508 1242 277 84 20 chrX 120984192 120984535 -45665761 - ORR1D1 LTR MaLR -1 373 9 7 1508 261 250 7 66 chrX 120984603 120984690 -45665606 + MTE2a LTR MaLR 3 82 -337 7 1508 1054 103 0 0 chrX 120984690 120984836 -45665460 + B1_Mm SINE Alu 2 147 0 7 1508 371 279 18 97 chrX 120984836 120984977 -45665319 + MTE2a LTR MaLR 68 169 -210 7 1508 7005 56 2 3 chrX 120984988 120985887 -45664409 + L1Md_F3 LINE L1 5673 6570 -14 7 1508 269 348 11 0 chrX 120985998 120986087 -45664209 + MTE2a LTR MaLR 318 407 -14 7 1508 751 301 8 27 chrX 120986600 120986966 -45663330 + Lx5 LINE L1 904 1262 -6466 7 1508 1059 273 118 82 chrX 120986966 120987771 -45662525 + RLTR22_Mur LTR ERVK 1 802 -1046 7 1508 374 322 20 27 chrX 120987917 120988064 -45662232 + RLTR22_Mur LTR ERVK 1104 1249 -73 7 1508 7200 244 37 108 chrX 120988064 120992556 -45657740 + Lx5 LINE L1 2881 7031 -19 7 1508 583 278 26 88 chrX 120992554 120992927 -45657369 - Lx7 LINE L1 -29 7667 7318 7 1508 2200 112 16 3 chrX 120992927 120993250 -45657046 - ORR1A2 LTR MaLR 0 327 1 8 1508 583 278 26 88 chrX 120993250 120993263 -45657033 - Lx7 LINE L1 -379 7317 7305 7 1508 1882 193 12 0 chrX 120993258 120993600 -45656696 + Lx7 LINE L1 6657 7002 -694 8 1508 563 237 7 51 chrX 120993715 120993853 -45656443 - MT2A LTR ERVL -401 132 1 8 1508 433 146 73 0 chrX 120993853 120993935 -45656361 - MERVL_2A-int LTR ERVL 0 5761 5674 8 1508 2902 253 45 15 chrX 120994057 120994808 -45655488 - ORR1D-int LTR MaLR -142 1228 455 8 1508 414 297 45 22 chrX 120994817 120995092 -45655204 + Lx8 LINE L1 5401 5670 -177 8 1508 484 320 20 10 chrX 120995438 120995637 -45654659 + Lx8 LINE L1 6332 6532 -941 8 1508 4964 95 15 12 chrX 120996038 120997434 -45652862 - L1Md_F LINE L1 -3979 1904 505 8 1508 591 158 85 0 chrX 120997463 120997577 -45652719 + L1Md_T LINE L1 5545 5685 -897 8 1508 4342 57 0 2 chrX 120997580 120998130 -45652166 - L1Md_F3 LINE L1 -2 6582 6034 8 1508 3594 45 0 0 chrX 120998130 120998605 -45651691 + L1Md_F3 LINE L1 5548 6022 -562 8 1508 6123 109 3 3 chrX 120998606 120999499 -45650797 + L1_Mus2 LINE L1 5674 6566 0 8 1508 991 208 41 24 chrX 120999503 120999794 -45650502 + L1_Mur3 LINE L1 2992 3287 -2593 8 1508 746 207 24 2 chrX 120999814 120999987 -45650309 + Lx7 LINE L1 5620 5826 -354 8 1508 270 232 0 35 chrX 121000016 121000101 -45650195 + Lx6 LINE L1 5819 5900 -1560 1 1508 2054 202 24 31 chrX 121000104 121000344 -45649952 + MTC LTR MaLR 1 237 -184 2 1508 6379 101 6 1 chrX 121000344 121001233 -45649063 - RLTR13B1 LTR ERVK 0 893 1 3 1508 2054 202 24 31 chrX 121001233 121001416 -45648880 + MTC LTR MaLR 238 421 0 2 1508 327 319 40 49 chrX 121001422 121001646 -45648650 + Lx6 LINE L1 5905 6126 -1334 1 1508 260 290 0 39 chrX 121001641 121001770 -45648526 + Lx6 LINE L1 7322 7445 -15 1 1508 1348 218 20 78 chrX 121002136 121002480 -45647816 + RLTR21 LTR ERVK 1 324 -1248 4 1508 2050 211 57 76 chrX 121002518 121003112 -45647184 + RLTR21 LTR ERVK 550 1130 -442 4 1508 351 0 0 0 chrX 121003112 121003151 -45647145 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1508 2050 211 57 76 chrX 121003151 121003224 -45647072 + RLTR21 LTR ERVK 1131 1204 -368 4 1508 551 239 59 18 chrX 121003289 121003459 -45646837 - ORR1B2 LTR MaLR -190 177 1 6 1508 252 239 0 14 chrX 121003494 121003566 -45646730 + GA-rich Low_complexity Low_complexity 1 71 0 7 1508 409 115 11 11 chrX 121003569 121003657 -45646639 + (CATA)n Simple_repeat Simple_repeat 1 88 0 8 1508 581 178 213 19 chrX 121008250 121008405 -45641891 + B2_Mm2 SINE B2 1 185 -10 9 1508 540 9 0 8 chrX 121008405 121008523 -45641773 + (GGAA)n Simple_repeat Simple_repeat 1 116 0 1 1508 1145 63 17 11 chrX 121008523 121008700 -45641596 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 1 1508 2877 122 7 0 chrX 121009462 121009895 -45640401 - L1_Mus3 LINE L1 -6 6632 6197 1 1508 265 24 23 23 chrX 121010065 121010108 -45640188 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 1 1508 256 326 9 9 chrX 121016215 121016347 -45633949 + MurSAT1 Satellite Satellite 1 132 -3 1 1508 228 315 35 35 chrX 121016754 121016869 -45633427 + MurSAT1 Satellite Satellite 1 115 -5 1 1508 320 331 8 8 chrX 121016909 121017113 -45633183 + MurSAT1 Satellite Satellite 1 204 -2 1 1508 286 295 10 5 chrX 121017315 121017458 -45632838 + MurSAT1 Satellite Satellite 1 143 -2 1 1508 338 289 0 0 chrX 121017789 121017886 -45632410 + MurSAT1 Satellite Satellite 1 97 -23 1 1508 248 309 36 9 chrX 121018405 121018516 -45631780 + MurSAT1 Satellite Satellite 5 118 -2 1 1508 284 313 15 5 chrX 121019509 121019685 -45630611 + MurSAT1 Satellite Satellite 1 177 -2 1 1508 258 172 46 15 chrX 121020091 121020156 -45630140 + MurSAT1 Satellite Satellite 54 120 0 2 1508 250 262 35 12 chrX 121020749 121020834 -45629462 + MurSAT1 Satellite Satellite 7 93 -27 2 1508 281 320 0 0 chrX 121021245 121021342 -45628954 + MurSAT1 Satellite Satellite 1 97 -23 2 1508 304 292 15 5 chrX 121021811 121021983 -45628313 + MurSAT1 Satellite Satellite 1 173 -2 2 1508 270 302 10 10 chrX 121022394 121022491 -45627805 + MurSAT1 Satellite Satellite 1 97 -23 2 1508 247 286 35 12 chrX 121023047 121023132 -45627164 + MurSAT1 Satellite Satellite 7 93 -27 2 1508 269 263 13 13 chrX 121023542 121023640 -45626656 + MurSAT1 Satellite Satellite 1 98 0 2 1508 271 274 35 12 chrX 121024196 121024281 -45626015 + MurSAT1 Satellite Satellite 7 93 -27 2 1508 269 263 13 13 chrX 121025840 121025938 -45624358 + MurSAT1 Satellite Satellite 1 98 0 2 1508 271 274 35 12 chrX 121026494 121026579 -45623717 + MurSAT1 Satellite Satellite 7 93 -27 2 1508 270 302 10 10 chrX 121028139 121028236 -45622060 + MurSAT1 Satellite Satellite 1 97 -23 3 1508 247 286 35 12 chrX 121028792 121028877 -45621419 + MurSAT1 Satellite Satellite 7 93 -27 3 1508 297 292 10 10 chrX 121029288 121029385 -45620911 + MurSAT1 Satellite Satellite 1 97 -23 3 1508 233 332 26 0 chrX 121029850 121030026 -45620270 + MurSAT1 Satellite Satellite 1 180 -2 3 1508 233 350 0 0 chrX 121030437 121030534 -45619762 + MurSAT1 Satellite Satellite 1 97 -23 3 1508 247 231 0 0 chrX 121031536 121031588 -45618708 + MurSAT1 Satellite Satellite 41 92 -28 3 1508 236 186 0 0 chrX 121031926 121031969 -45618327 + MurSAT1 Satellite Satellite 50 92 -28 3 1508 245 163 0 0 chrX 121032307 121032350 -45617946 + MurSAT1 Satellite Satellite 50 92 -28 3 1508 252 290 12 12 chrX 121032538 121032731 -45617565 + MurSAT1 Satellite Satellite 1 193 -10 3 1508 250 356 8 8 chrX 121033065 121033184 -45617112 + MurSAT1 Satellite Satellite 1 119 -1 3 1508 250 319 9 9 chrX 121033220 121033334 -45616962 + MurSAT1 Satellite Satellite 6 119 -1 3 1508 275 324 0 0 chrX 121033959 121034068 -45616228 + MurSAT1 Satellite Satellite 1 116 -4 4 1508 328 292 22 22 chrX 121034472 121034759 -45615537 + MurSAT1 Satellite Satellite 1 287 -1 4 1508 257 357 0 0 chrX 121035000 121035098 -45615198 + MurSAT1 Satellite Satellite 1 98 -22 4 1508 267 282 6 6 chrX 121035535 121035644 -45614652 + MurSAT1 Satellite Satellite 1 109 0 4 1508 232 330 5 5 chrX 121036049 121036192 -45614104 + MurSAT1 Satellite Satellite 1 143 -2 4 1508 270 293 0 0 chrX 121036689 121036771 -45613525 + MurSAT1 Satellite Satellite 1 82 -38 4 1508 222 218 0 0 chrX 121039348 121039403 -45610893 + T-rich Low_complexity Low_complexity 1 55 0 4 1508 793 168 14 0 chrX 121039441 121039584 -45610712 + B1_Mus1 SINE Alu 4 148 0 4 1508 847 160 6 6 chrX 121039586 121039762 -45610534 + GA-rich Low_complexity Low_complexity 2 177 0 4 1508 243 0 0 0 chrX 121039817 121039844 -45610452 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1508 198 0 0 0 chrX 121039900 121039922 -45610374 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 5 1508 28 0 0 0 chrX 121040014 121040042 -45610254 + AT_rich Low_complexity Low_complexity 1 28 0 5 1508 864 129 14 0 chrX 121040135 121040274 -45610022 + B1_Mus1 SINE Alu 2 142 -6 5 1508 701 142 0 8 chrX 121040277 121040405 -45609891 + (GAAA)n Simple_repeat Simple_repeat 2 128 0 5 1508 780 175 7 0 chrX 121040728 121040865 -45609431 + B1_Mus1 SINE Alu 3 140 -8 5 1508 678 140 0 0 chrX 121040877 121040991 -45609305 + (GAAA)n Simple_repeat Simple_repeat 2 115 0 5 1508 24 0 0 0 chrX 121041023 121041047 -45609249 + AT_rich Low_complexity Low_complexity 1 24 0 5 1508 198 0 0 0 chrX 121041106 121041128 -45609168 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1508 309 284 0 28 chrX 121041137 121041318 -45608978 + T-rich Low_complexity Low_complexity 1 176 0 5 1508 841 170 0 0 chrX 121041334 121041475 -45608821 + B1_Mus1 SINE Alu 2 142 -6 5 1508 208 85 20 41 chrX 121041487 121041536 -45608760 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 6 1508 247 244 0 0 chrX 121041640 121041722 -45608574 + T-rich Low_complexity Low_complexity 1 82 0 6 1508 228 100 0 0 chrX 121041774 121041814 -45608482 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1508 23 0 0 0 chrX 121041866 121041889 -45608407 + AT_rich Low_complexity Low_complexity 1 23 0 6 1508 830 171 7 0 chrX 121041923 121042069 -45608227 + B1_Mus1 SINE Alu 2 148 0 6 1508 794 199 11 0 chrX 121042085 121042261 -45608035 + GA-rich Low_complexity Low_complexity 3 180 0 6 1508 206 225 0 48 chrX 121042486 121042570 -45607726 + T-rich Low_complexity Low_complexity 3 82 0 6 1508 867 129 14 7 chrX 121042576 121042716 -45607580 + B1_Mus1 SINE Alu 2 142 -6 6 1508 306 73 0 0 chrX 121042735 121042776 -45607520 + (A)n Simple_repeat Simple_repeat 1 41 0 6 1508 947 115 13 0 chrX 121042789 121042945 -45607351 + (GAAA)n Simple_repeat Simple_repeat 3 160 0 6 1508 780 175 7 0 chrX 121043271 121043408 -45606888 + B1_Mus1 SINE Alu 3 140 -8 7 1508 678 140 0 0 chrX 121043418 121043532 -45606764 + (GAAA)n Simple_repeat Simple_repeat 2 115 0 7 1508 27 0 0 0 chrX 121043564 121043591 -45606705 + AT_rich Low_complexity Low_complexity 1 27 0 7 1508 225 0 0 0 chrX 121043650 121043675 -45606621 + (T)n Simple_repeat Simple_repeat 1 25 0 7 1508 341 276 11 17 chrX 121043694 121043871 -45606425 + T-rich Low_complexity Low_complexity 1 176 0 7 1508 841 170 0 0 chrX 121043887 121044028 -45606268 + B1_Mus1 SINE Alu 2 142 -6 7 1508 208 85 20 41 chrX 121044040 121044089 -45606207 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 7 1508 247 244 0 0 chrX 121044193 121044275 -45606021 + T-rich Low_complexity Low_complexity 1 82 0 7 1508 288 70 0 0 chrX 121044327 121044370 -45605926 + (T)n Simple_repeat Simple_repeat 1 43 0 7 1508 23 0 0 0 chrX 121044422 121044445 -45605851 + AT_rich Low_complexity Low_complexity 1 23 0 7 1508 830 171 7 0 chrX 121044479 121044625 -45605671 + B1_Mus1 SINE Alu 2 148 0 8 1508 913 163 0 11 chrX 121044647 121044827 -45605469 + GA-rich Low_complexity Low_complexity 3 180 0 8 1508 206 238 0 48 chrX 121045053 121045137 -45605159 + T-rich Low_complexity Low_complexity 3 82 0 8 1508 840 137 14 7 chrX 121045143 121045283 -45605013 + B1_Mus1 SINE Alu 2 142 -6 8 1508 515 132 11 0 chrX 121045302 121045393 -45604903 + (GAA)n Simple_repeat Simple_repeat 2 93 0 8 1508 1291 50 6 11 chrX 121045393 121045574 -45604722 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 8 1508 776 153 22 14 chrX 121045910 121046049 -45604247 + B1_Mus1 SINE Alu 2 141 -7 8 1508 207 0 0 0 chrX 121046053 121046076 -45604220 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 8 1508 310 160 26 77 chrX 121046238 121046394 -45603902 + (TTA)n Simple_repeat Simple_repeat 3 150 0 8 1508 387 0 0 0 chrX 121047002 121047045 -45603251 + (TTA)n Simple_repeat Simple_repeat 1 43 0 8 1508 213 39 0 0 chrX 121047190 121047216 -45603080 + (A)n Simple_repeat Simple_repeat 1 26 0 9 1508 31 82 0 0 chrX 121047306 121047379 -45602917 + AT_rich Low_complexity Low_complexity 1 73 0 9 1508 21 0 0 0 chrX 121047516 121047537 -45602759 + AT_rich Low_complexity Low_complexity 1 21 0 9 1508 22 0 0 0 chrX 121047560 121047582 -45602714 + AT_rich Low_complexity Low_complexity 1 22 0 9 1508 201 312 0 41 chrX 121047947 121048094 -45602202 + A-rich Low_complexity Low_complexity 1 141 0 9 1508 198 0 0 0 chrX 121048246 121048268 -45602028 + (A)n Simple_repeat Simple_repeat 1 22 0 9 1508 254 139 0 65 chrX 121048546 121048623 -45601673 + A-rich Low_complexity Low_complexity 1 72 0 9 1508 183 42 0 0 chrX 121049410 121049434 -45600862 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 1508 21 36 0 0 chrX 121049458 121049486 -45600810 + AT_rich Low_complexity Low_complexity 1 28 0 9 1508 21 0 0 0 chrX 121049642 121049663 -45600633 + AT_rich Low_complexity Low_complexity 1 21 0 9 1508 261 0 0 0 chrX 121049771 121049800 -45600496 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1508 210 37 0 0 chrX 121049835 121049862 -45600434 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 1 1508 21 0 0 0 chrX 121049969 121049990 -45600306 + AT_rich Low_complexity Low_complexity 1 21 0 1 1508 187 31 62 0 chrX 121050113 121050145 -45600151 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1508 216 67 0 0 chrX 121050253 121050283 -45600013 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 1508 180 0 0 0 chrX 121050446 121050466 -45599830 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1 1508 969 56 0 0 chrX 121050512 121050638 -45599658 + B1_Mus2 SINE Alu 12 137 -10 1 1508 380 20 0 20 chrX 121050638 121050688 -45599608 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1 1508 207 0 0 0 chrX 121050729 121050752 -45599544 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1 1508 291 28 0 0 chrX 121050779 121050815 -45599481 + (TTG)n Simple_repeat Simple_repeat 1 36 0 1 1508 22 0 0 0 chrX 121050815 121050837 -45599459 + AT_rich Low_complexity Low_complexity 1 22 0 1 1508 1088 79 0 0 chrX 121050872 121051012 -45599284 + B1_Mus1 SINE Alu 2 141 -7 1 1508 225 0 0 0 chrX 121051015 121051040 -45599256 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1 1508 261 57 0 0 chrX 121051875 121051910 -45598386 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1508 1168 48 7 0 chrX 121052212 121052357 -45597939 + B1_Mus2 SINE Alu 2 147 0 1 1508 185 108 0 26 chrX 121052581 121052619 -45597677 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 1 1508 1039 102 0 0 chrX 121052701 121052848 -45597448 + B1_Mus1 SINE Alu 2 148 0 1 1508 194 0 39 0 chrX 121052848 121052874 -45597422 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1 1508 252 120 0 0 chrX 121052961 121053011 -45597285 + (T)n Simple_repeat Simple_repeat 1 50 0 1 1508 222 37 0 0 chrX 121053366 121053393 -45596903 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1508 267 54 0 0 chrX 121053512 121053549 -45596747 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 1508 216 0 0 0 chrX 121053609 121053633 -45596663 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 1 1508 480 48 0 0 chrX 121053903 121053966 -45596330 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1508 182 50 0 178 chrX 121054081 121054154 -45596142 + A-rich Low_complexity Low_complexity 1 60 0 1 1508 400 313 74 91 chrX 121055089 121055507 -45594789 + L1MD LINE L1 3070 3480 -2666 1 1508 343 19 36 36 chrX 121055534 121055590 -45594706 + (CAAAAA)n Simple_repeat Simple_repeat 4 59 0 1 1508 190 73 24 24 chrX 121055695 121055737 -45594559 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 1 1508 183 139 0 0 chrX 121056693 121056729 -45593567 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 1 1508 3383 132 20 0 chrX 121057536 121058135 -45592161 + L1_Mur1 LINE L1 1429 2039 -3847 1 1508 2523 119 7 2 chrX 121058528 121058956 -45591340 + L1_Mur1 LINE L1 2086 2515 -3371 1 1508 1635 189 32 66 chrX 121058956 121059363 -45590933 + RLTR9C LTR ERVK 1 393 0 1 1508 3733 200 27 107 chrX 121059372 121060633 -45589663 + MMETn-int LTR ERVK 10 1169 -3675 1 1508 2221 192 24 20 chrX 121060650 121061150 -45589146 + ETnERV2-int LTR ERVK 2496 2997 -4409 1 1508 903 152 0 18 chrX 121061150 121061318 -45588978 + RLTR13D1 LTR ERVK 486 650 -156 1 1508 3484 184 28 33 chrX 121061876 121063334 -45586962 + ETnERV2-int LTR ERVK 2357 4085 -3321 1 1508 2405 59 23 0 chrX 121063339 121063646 -45586650 - IAPLTR2b LTR ERVK -13 314 1 1 1508 12768 83 12 9 chrX 121063646 121065466 -45584830 - IAPEz-int LTR ERVK 0 6481 4656 1 1508 1785 71 4 0 chrX 121065465 121065704 -45584592 - IAPEY3-int LTR ERVK -5183 2497 2258 1 1508 379 105 0 0 chrX 121065709 121065766 -45584530 - B1_Mus1 SINE Alu -91 57 1 1 1508 4400 136 85 60 chrX 121065766 121066697 -45583599 - IAPEz-int LTR ERVK -5486 995 1 1 1508 2207 80 23 3 chrX 121066717 121067019 -45583277 - IAPLTR2b LTR ERVK -19 308 1 1 1508 1032 227 13 53 chrX 121067028 121067616 -45582680 + ETnERV2-int LTR ERVK 2901 3746 -1098 1 1508 441 105 0 26 chrX 121067826 121067904 -45582392 + ETnERV2-int LTR ERVK 7327 7402 -4 1 1508 1586 201 55 87 chrX 121067909 121068313 -45581983 + RLTR9C LTR ERVK 3 393 0 1 1508 11239 139 34 8 chrX 121068313 121069874 -45580422 + L1_Mur1 LINE L1 2510 4122 -1764 1 1508 312 27 0 0 chrX 121069874 121069911 -45580385 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1508 11239 139 34 8 chrX 121069911 121070488 -45579808 + L1_Mur1 LINE L1 4123 4702 -1184 1 1508 1813 147 3 10 chrX 121070490 121070793 -45579503 + RLTR22_Mus LTR ERVK 3 303 -1505 1 1508 559 64 0 0 chrX 121071325 121071403 -45578893 + RLTR22_Mus LTR ERVK 294 371 -1437 1 1508 8237 107 2 3 chrX 121071406 121073350 -45576946 - L1_Mus2 LINE L1 0 6566 4623 1 1508 2934 53 3 0 chrX 121073351 121073707 -45576589 - IAPEY2_LTR LTR ERVK 0 357 1 1 1508 3882 109 21 7 chrX 121073707 121074316 -45575980 - IAPEy-int LTR ERVK 0 7513 6896 1 1508 448 51 0 0 chrX 121074316 121074375 -45575921 - IAPEY3-int LTR ERVK -2770 4910 4852 1 1508 3146 89 11 0 chrX 121074368 121074815 -45575481 - IAPEY3-int LTR ERVK -4991 2689 2238 1 1508 8697 136 13 23 chrX 121074792 121076419 -45573877 - IAPEY3-int LTR ERVK -5698 1982 22 1 1508 2624 71 62 0 chrX 121076419 121076755 -45573541 - IAPEY2_LTR LTR ERVK 0 357 1 1 1508 13951 142 5 6 chrX 121076755 121079257 -45571039 - L1_Mus2 LINE L1 -1256 4627 2128 1 1508 404 91 0 0 chrX 121079262 121079328 -45570968 + L1_Mm LINE L1 3661 3726 -2157 1 1508 2063 114 18 32 chrX 121079337 121079710 -45570586 + RLTR22_Mus LTR ERVK 354 832 -1016 1 1508 225 0 0 0 chrX 121079710 121079735 -45570561 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1508 275 153 81 27 chrX 121079893 121079914 -45570382 - PB1D9 SINE Alu -2 118 96 1 1508 1217 89 0 11 chrX 121079914 121080095 -45570201 + L1Md_F2 LINE L1 6392 6570 -12 1 1508 275 153 81 27 chrX 121080095 121080147 -45570149 - PB1D9 SINE Alu -25 95 41 1 1508 567 107 0 0 chrX 121080147 121080179 -45570117 - 4.5SRNA scRNA scRNA -4 90 7 1 1508 1072 42 0 0 chrX 121080179 121080321 -45569975 + L1_Mm LINE L1 3275 3416 -2467 1 1508 6722 148 12 55 chrX 121080321 121081581 -45568715 + Lx3A LINE L1 5770 6975 -6 1 1508 404 35 0 34 chrX 121081584 121081643 -45568653 + (TAAA)n Simple_repeat Simple_repeat 1 57 0 1 1508 560 14 14 0 chrX 121081692 121081761 -45568535 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1508 443 239 11 0 chrX 121082773 121082861 -45567435 + ID_B1 SINE B4 135 223 -1 1 1508 246 402 108 0 chrX 121083083 121083185 -45567111 + B3A SINE B2 69 181 -17 1 1508 207 0 0 0 chrX 121083187 121083210 -45567086 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1508 565 325 19 9 chrX 121083540 121083751 -45566545 - ID_B1 SINE B4 -8 216 4 1 1508 765 265 36 23 chrX 121083838 121084058 -45566238 + MTD LTR MaLR 3 225 -194 1 1508 281 82 20 0 chrX 121084069 121084118 -45566178 + (CAAAAA)n Simple_repeat Simple_repeat 3 52 0 1 1508 378 361 20 20 chrX 121084134 121084281 -45566015 + RSINE1 SINE B4 4 150 -15 1 1508 285 29 0 0 chrX 121084287 121084321 -45565975 + (TAA)n Simple_repeat Simple_repeat 3 36 0 1 1508 690 322 35 103 chrX 121084489 121084859 -45565437 - MTE2a LTR MaLR -34 345 1 1 1508 1342 314 142 103 chrX 121084864 121086056 -45564240 - MTE2a-int LTR MaLR -137 1443 37 1 1508 284 302 183 23 chrX 121086257 121086606 -45563690 - Lx9 LINE L1 -15 7629 7225 1 1508 345 248 37 81 chrX 121086663 121086799 -45563497 - Lx9 LINE L1 -553 7091 6962 1 1508 8039 39 6 0 chrX 121087096 121088074 -45562222 + L1Md_A LINE L1 5599 6582 0 1 1508 13521 48 5 14 chrX 121088074 121090834 -45559462 - L1Md_A LINE L1 -2920 2963 232 1 1508 1473 249 44 14 chrX 121091428 121091864 -45558432 - Lx2B LINE L1 -17 6983 6535 1 1508 791 158 26 7 chrX 121091866 121092019 -45558277 - Lx2B LINE L1 -689 6311 6156 1 1508 416 325 16 24 chrX 121092042 121092165 -45558131 - B3 SINE B2 -93 123 2 1 1508 1044 96 0 52 chrX 121092398 121092552 -45557744 + B1_Mm SINE Alu 2 147 0 1 1508 333 161 0 0 chrX 121092552 121092639 -45557657 + A-rich Low_complexity Low_complexity 1 87 0 1 1508 251 93 0 23 chrX 121092828 121092872 -45557424 + (TATG)n Simple_repeat Simple_repeat 4 46 0 1 1508 1086 261 56 85 chrX 121093691 121094081 -45556215 - ORR1C2 LTR MaLR 0 384 6 1 1508 795 175 0 0 chrX 121094093 121094247 -45556049 - Lx2 LINE L1 0 6997 6844 1 1508 1888 180 3 8 chrX 121094247 121094633 -45555663 + Lx2 LINE L1 5904 6287 -710 1 1508 207 224 0 39 chrX 121094661 121094674 -45555622 + polypyrimidine Low_complexity Low_complexity 38 49 0 1 1508 434 58 29 0 chrX 121094674 121094743 -45555553 + (TCTCTG)n Simple_repeat Simple_repeat 2 72 0 1 1508 207 224 0 39 chrX 121094743 121094780 -45555516 + polypyrimidine Low_complexity Low_complexity 1 37 0 1 1508 291 122 0 0 chrX 121094815 121094864 -45555432 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1508 540 301 37 0 chrX 121094888 121095024 -45555272 - RSINE1 SINE B4 -22 143 3 1 1508 498 33 0 0 chrX 121095140 121095200 -45555096 + (GGAA)n Simple_repeat Simple_repeat 2 61 0 1 1508 231 189 19 19 chrX 121095240 121095294 -45555002 + ORR1D2 LTR MaLR 1 54 -324 1 1508 840 271 97 94 chrX 121095328 121095670 -45554626 + ORR1D2 LTR MaLR 24 366 -4 1 1508 402 264 87 15 chrX 121095739 121095935 -45554361 + L1MD3 LINE L1 7773 7982 -13 1 1508 2397 266 28 30 chrX 121096632 121096761 -45553535 - RMER1B Other Other -4 1062 933 1 1508 1649 72 63 0 chrX 121096761 121096983 -45553313 + L1Md_F2 LINE L1 6328 6563 -19 1 1508 2397 276 34 42 chrX 121096983 121097875 -45552421 - RMER1B Other Other -134 932 106 1 1508 1114 266 18 21 chrX 121097878 121098158 -45552138 + ORR1B1 LTR MaLR 116 394 0 1 1508 1678 246 55 137 chrX 121098209 121098813 -45551483 - RLTR1D LTR ERV1 0 605 52 1 1508 930 121 81 0 chrX 121099006 121099146 -45551150 + Lx3C LINE L1 5889 6028 -948 1 1508 678 75 0 0 chrX 121099146 121099239 -45551057 + (GA)n Simple_repeat Simple_repeat 2 94 0 1 1508 930 121 81 0 chrX 121099239 121099271 -45551025 + Lx3C LINE L1 6029 6073 -903 1 1508 694 145 21 21 chrX 121099275 121099421 -45550875 + RMER17D2 LTR ERVK 703 906 0 1 1508 474 303 52 52 chrX 121100920 121101265 -45549031 + MuLV-int LTR ERV1 7115 7459 -147 1 1508 484 74 53 41 chrX 121102068 121102237 -45548059 + (CAAA)n Simple_repeat Simple_repeat 2 172 0 1 1508 2231 148 25 59 chrX 121102238 121102712 -45547584 + Lx3_Mus LINE L1 5783 6240 -769 1 1508 4706 113 11 1 chrX 121102708 121103453 -45546843 - L1_Mm LINE L1 -180 5703 4952 1 1508 316 309 0 0 chrX 121103549 121103630 -45546666 - ORR1D2 LTR MaLR -284 86 6 1 1508 920 289 96 32 chrX 121103949 121104332 -45545964 + MT2A LTR ERVL 1 528 -73 1 1508 282 29 0 0 chrX 121104337 121104372 -45545924 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1508 2155 212 54 22 chrX 121104514 121105016 -45545280 - Lx2B LINE L1 -6 6994 6477 1 1508 2117 191 11 3 chrX 121105007 121105472 -45544824 + Lx2B LINE L1 5104 5591 -587 1 1508 6560 96 4 8 chrX 121105475 121106767 -45543529 - L1Md_F2 LINE L1 -2 6580 5296 1 1508 2064 107 21 15 chrX 121106768 121107100 -45543196 - L1Md_F2 LINE L1 -2 6580 6247 1 1508 6687 93 6 4 chrX 121107100 121108137 -45542159 - L1Md_F LINE L1 -5388 1336 294 1 1508 3462 28 2 0 chrX 121108197 121108592 -45541704 - MTA_Mm LTR MaLR 0 396 1 1 1508 9282 31 2 1 chrX 121108592 121109689 -45540607 - MTA_Mm-int LTR MaLR 0 1098 1 1 1508 2576 29 3 0 chrX 121109689 121109997 -45540299 - MTA_Mm LTR MaLR 0 396 88 1 1508 2155 93 186 0 chrX 121109997 121110342 -45539954 + IAPLTR2a LTR ERVK 1 409 -2 1 188 13239 53 107 8 chrX 121110342 121112474 -45537822 + IAPEz-int LTR ERVK 3 2345 -4136 1 1509 387 89 0 0 chrX 121112473 121112529 -45537767 + IAPEz-int LTR ERVK 2719 2774 -3707 1 1509 3102 20 0 0 chrX 121112527 121112884 -45537412 + IAPEz-int LTR ERVK 4001 4357 -2124 1 1509 6496 30 3 18 chrX 121112875 121113658 -45536638 + IAPEz-int LTR ERVK 5709 6479 -2 1 1509 2112 96 186 0 chrX 121113660 121114005 -45536291 + IAPLTR2a LTR ERVK 1 409 -2 1 1509 779 32 0 0 chrX 121114009 121114103 -45536193 - MTA_Mm LTR MaLR -302 94 1 1 1509 560 179 54 0 chrX 121114108 121114220 -45536076 + Lx2B LINE L1 5607 5724 -1284 1 1509 350 219 72 88 chrX 121114221 121114346 -45535950 + MT2B LTR ERVL 154 276 -325 2 1509 632 112 20 0 chrX 121114272 121114370 -45535926 + B1_Mus2 SINE Alu 47 146 -1 2 1509 298 57 19 19 chrX 121114379 121114433 -45535863 + (CAAAAA)n Simple_repeat Simple_repeat 4 57 0 2 1509 2536 169 11 50 chrX 121114437 121114972 -45535324 + Lx2B LINE L1 5769 6282 -718 1 1509 333 303 30 10 chrX 121115167 121115267 -45535029 + RSINE1 SINE B4 56 157 -8 2 1509 298 156 0 0 chrX 121115325 121115370 -45534926 - L1_Mur3 LINE L1 -2356 3524 3480 2 1509 2686 65 3 0 chrX 121115567 121115920 -45534376 - RLTR13A LTR ERVK -501 354 1 2 1509 8118 106 8 1 chrX 121116608 121118212 -45532084 - L1_Mus2 LINE L1 -297 6269 4652 2 1509 387 297 130 29 chrX 121118366 121118744 -45531552 + Charlie2a DNA MER1_type 1882 2297 -564 2 1509 423 184 0 26 chrX 121118752 121118859 -45531437 + CT-rich Low_complexity Low_complexity 13 116 0 2 1509 1126 88 0 0 chrX 121118859 121119007 -45531289 - B1_Mus1 SINE Alu 0 148 1 2 1509 405 297 90 36 chrX 121119143 121119254 -45531042 + Charlie2a DNA MER1_type 2476 2591 -270 2 1509 4174 123 122 3 chrX 121119254 121119948 -45530348 - L1_Mus3 LINE L1 -4 6634 5858 2 1509 405 297 90 36 chrX 121119948 121120171 -45530125 + Charlie2a DNA MER1_type 2592 2828 -33 2 1509 559 344 12 0 chrX 121120176 121120336 -45529960 + B3 SINE B2 5 166 -50 2 1509 351 0 0 0 chrX 121120336 121120375 -45529921 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1509 403 99 0 0 chrX 121120429 121120500 -45529796 - L1_Mus3 LINE L1 -4 6634 6564 2 1509 7432 62 9 6 chrX 121120500 121121504 -45528792 + MTA_Mm-int LTR MaLR 92 1098 0 2 1509 3038 38 67 0 chrX 121121504 121121875 -45528421 + MTA_Mm LTR MaLR 1 396 0 2 1509 4190 187 2 4 chrX 121121902 121122700 -45527596 - L1_Mus3 LINE L1 -526 5357 4561 2 1509 2681 158 2 31 chrX 121122698 121123186 -45527110 + L1_Mus3 LINE L1 5365 5782 -101 2 1509 951 109 0 14 chrX 121123186 121123326 -45526970 - B1_Mm SINE Alu -9 138 1 2 1509 5720 120 3 12 chrX 121123326 121124214 -45526082 + L1_Mus3 LINE L1 5771 6626 -12 2 1509 3568 211 63 73 chrX 121124223 121125745 -45524551 + RMER17C-int LTR ERVK 1946 3238 0 2 1509 260 260 68 147 chrX 121125745 121126011 -45524285 + RMER17C LTR ERVK 2 246 -164 2 1509 326 287 0 22 chrX 121126176 121126265 -45524031 + B4A SINE B4 206 292 0 2 1509 1012 337 34 48 chrX 121126359 121126979 -45523317 + RMER15-int LTR ERVL 1145 1755 -3244 2 1509 615 345 53 11 chrX 121126994 121127352 -45522944 + MTE2b LTR MaLR 5 377 -2 2 1509 591 321 10 25 chrX 121127360 121127561 -45522735 + MTE2b-int LTR MaLR 6 203 -1377 2 1509 1419 291 20 15 chrX 121127569 121127974 -45522322 - MTD LTR MaLR -12 407 1 2 1509 503 335 27 5 chrX 121127979 121128165 -45522131 + MTE2b-int LTR MaLR 213 402 -1178 2 1509 734 327 66 16 chrX 121128181 121128486 -45521810 + MTE2b-int LTR MaLR 553 872 -708 2 1509 740 325 55 45 chrX 121128537 121128849 -45521447 + ORR1D2 LTR MaLR 1 315 -55 2 1509 278 316 46 134 chrX 121128851 121129045 -45521251 - RLTR24 LTR ERV1 -75 454 278 2 1509 3223 197 51 49 chrX 121129046 121130227 -45520069 + Lx5 LINE L1 5176 6380 -670 2 1509 436 161 11 79 chrX 121130239 121130328 -45519968 - RMER19A LTR ERVK -27 710 636 2 1509 1567 286 66 51 chrX 121130383 121131065 -45519231 + ORR1D2-int LTR MaLR 1 666 -914 2 1509 459 52 0 0 chrX 121131071 121131129 -45519167 + (GAAA)n Simple_repeat Simple_repeat 2 59 0 2 1509 236 338 24 36 chrX 121131172 121131255 -45519041 + ORR1D2-int LTR MaLR 874 955 -554 2 1509 180 0 0 0 chrX 121131374 121131394 -45518902 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1509 1124 247 150 44 chrX 121131734 121132207 -45518089 + ORR1D-int LTR MaLR 825 1347 -23 2 1509 3446 194 13 90 chrX 121133782 121134552 -45515744 + RMER6D LTR ERVK 1 711 -9 2 1509 270 301 7 29 chrX 121135293 121135430 -45514866 + GA-rich Low_complexity Low_complexity 2 135 0 2 1509 336 143 0 0 chrX 121135477 121135533 -45514763 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 2 1509 2136 214 104 8 chrX 121136031 121136559 -45513737 - Lx3C LINE L1 -5 6971 6393 2 1509 3860 154 13 10 chrX 121136559 121137230 -45513066 - L1_Mus3 LINE L1 0 6638 5966 2 1509 12139 156 49 1 chrX 121137230 121139578 -45510718 + L1_Mus3 LINE L1 3466 5940 -698 2 1509 12923 168 27 17 chrX 121139576 121142594 -45507702 - Lx3C LINE L1 -568 6408 3363 2 1509 582 318 74 31 chrX 121142595 121142919 -45507377 + ORR1D-int LTR MaLR 1243 1580 0 2 1509 901 323 15 11 chrX 121143007 121143267 -45507029 + MTE2b LTR MaLR 119 379 0 2 1509 737 372 0 75 chrX 121143520 121143632 -45506664 + B4A SINE B4 11 117 -175 2 1509 1123 65 0 13 chrX 121143632 121143788 -45506508 - L1Md_F2 LINE L1 -13 6569 6416 2 1509 737 372 0 75 chrX 121143788 121143980 -45506316 + B4A SINE B4 118 292 0 2 1509 265 399 25 0 chrX 121144001 121144159 -45506137 + RMER15-int LTR ERVL 2002 2163 -2836 2 1509 645 280 28 0 chrX 121144471 121144685 -45505611 - URR1B DNA MER1_type -4 221 2 2 1509 997 354 50 44 chrX 121144685 121145413 -45504883 + RMER15-int LTR ERVL 4261 4992 -7 2 1509 481 353 98 35 chrX 121146047 121146385 -45503911 - L2a LINE L2 -84 3342 2984 2 1509 199 372 19 10 chrX 121146533 121146636 -45503660 - L2a LINE L2 -949 2470 2367 2 1509 252 114 0 0 chrX 121146917 121146952 -45503344 - L1_Mur1 LINE L1 -315 5571 5537 2 1509 320 300 8 15 chrX 121147047 121147179 -45503117 + GA-rich Low_complexity Low_complexity 1 131 0 2 1509 347 300 0 21 chrX 121147210 121147353 -45502943 + GA-rich Low_complexity Low_complexity 2 141 0 2 1509 282 322 22 22 chrX 121147466 121147644 -45502652 + CT-rich Low_complexity Low_complexity 2 179 0 2 1509 203 348 0 27 chrX 121147723 121147906 -45502390 + CT-rich Low_complexity Low_complexity 2 179 0 2 1509 336 314 6 25 chrX 121148201 121148364 -45501932 + GA-rich Low_complexity Low_complexity 2 161 0 2 1509 681 126 0 0 chrX 121148364 121148475 -45501821 + (GAAA)n Simple_repeat Simple_repeat 3 113 0 2 1509 208 250 0 30 chrX 121148616 121148682 -45501614 + CT-rich Low_complexity Low_complexity 1 64 0 2 1509 180 152 0 0 chrX 121148711 121148744 -45501552 + CT-rich Low_complexity Low_complexity 2 34 0 2 1509 363 328 6 11 chrX 121149063 121149239 -45501057 + CT-rich Low_complexity Low_complexity 2 176 0 2 1509 454 108 12 12 chrX 121149311 121149395 -45500901 + (TA)n Simple_repeat Simple_repeat 2 85 0 2 1509 216 86 0 0 chrX 121149395 121149429 -45500867 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1509 426 325 0 18 chrX 121149434 121149597 -45500699 + CT-rich Low_complexity Low_complexity 1 160 0 2 1509 365 351 6 15 chrX 121149801 121150144 -45500152 + GA-rich Low_complexity Low_complexity 1 339 0 2 1509 309 359 31 31 chrX 121150373 121150534 -45499762 + HAL1-3A_ME LINE L1 2288 2448 -410 2 1509 212 254 8 8 chrX 121150555 121150686 -45499610 + GA-rich Low_complexity Low_complexity 1 131 0 2 1509 337 267 113 49 chrX 121150795 121150937 -45499359 - HAL1-3A_ME LINE L1 -417 2441 2291 2 1509 360 356 11 14 chrX 121150986 121151248 -45499048 + CT-rich Low_complexity Low_complexity 1 261 0 2 1509 530 29 0 14 chrX 121151287 121151356 -45498940 + (TC)n Simple_repeat Simple_repeat 1 68 0 2 1509 300 285 75 68 chrX 121151370 121151517 -45498779 - HAL1-3A_ME LINE L1 -419 2439 2292 2 1509 252 332 7 25 chrX 121151521 121151728 -45498568 + CT-rich Low_complexity Low_complexity 1 203 0 2 1509 270 354 7 24 chrX 121151771 121151995 -45498301 + GA-rich Low_complexity Low_complexity 1 220 0 2 1509 218 185 12 36 chrX 121152022 121152106 -45498190 + GA-rich Low_complexity Low_complexity 5 86 0 2 1509 359 234 18 35 chrX 121152144 121152428 -45497868 + GA-rich Low_complexity Low_complexity 1 278 0 2 1509 207 270 17 17 chrX 121152494 121152671 -45497625 + GA-rich Low_complexity Low_complexity 1 177 0 2 1509 333 0 0 0 chrX 121153936 121153973 -45496323 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1509 203 161 0 18 chrX 121155304 121155361 -45494935 + T-rich Low_complexity Low_complexity 5 60 0 2 1509 238 146 20 40 chrX 121155450 121155500 -45494796 - MT2B2 LTR ERVL 0 584 536 2 1509 335 141 16 0 chrX 121155514 121155578 -45494718 + CT-rich Low_complexity Low_complexity 2 66 0 2 1509 6566 120 6 1 chrX 121155640 121156614 -45493682 + L1_Mus3 LINE L1 5657 6635 -3 2 1509 196 91 22 22 chrX 121156727 121156772 -45493524 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1509 704 323 0 30 chrX 121157458 121157659 -45492637 + B3 SINE B2 17 211 -5 2 1509 524 151 10 31 chrX 121157853 121157949 -45492347 + RLTR9C LTR ERVK 300 393 0 2 1509 293 275 19 56 chrX 121157950 121158058 -45492238 + MMETn-int LTR ERVK 1 104 -4740 2 1509 555 232 35 88 chrX 121158093 121158320 -45491976 + MMETn-int LTR ERVK 108 322 -4522 2 1509 3290 184 75 67 chrX 121158298 121159229 -45491067 + MMETn-int LTR ERVK 364 1631 -5775 2 1509 2258 196 22 35 chrX 121159256 121159765 -45490531 + MMETn-int LTR ERVK 2496 2997 -4409 2 1509 932 139 0 18 chrX 121159765 121159933 -45490363 + RLTR13D1 LTR ERVK 486 650 -156 2 1509 3667 201 26 53 chrX 121160494 121162528 -45487768 + MMETn-int LTR ERVK 2357 6420 -986 2 1509 458 127 0 25 chrX 121162739 121162820 -45487476 + MMETn-int LTR ERVK 7327 7405 -1 2 1509 1559 208 32 66 chrX 121162820 121163227 -45487069 + RLTR9C LTR ERVK 1 393 0 2 1509 7025 139 49 5 chrX 121163227 121164526 -45485770 + L1_Mur1 LINE L1 2510 3865 -2021 2 1509 1073 146 0 5 chrX 121164524 121164717 -45485579 + L1_Mur1 LINE L1 4511 4702 -1184 2 1509 2407 122 3 5 chrX 121164719 121165089 -45485207 + RLTR22_Mus LTR ERVK 3 371 -1437 2 1509 15446 114 3 5 chrX 121165096 121168441 -45481855 - L1_Mus2 LINE L1 0 6566 3236 2 1509 2981 48 3 0 chrX 121168441 121168823 -45481473 - L1Md_F2 LINE L1 -643 5939 5551 2 1509 4822 74 25 3 chrX 121168824 121169474 -45480822 + L1Md_F2 LINE L1 5907 6570 -12 2 1509 562 107 0 0 chrX 121169474 121169558 -45480738 - 4.5SRNA scRNA scRNA -4 90 7 2 1509 1109 43 0 0 chrX 121169558 121169699 -45480597 + L1_Mm LINE L1 3275 3415 -2468 2 1509 6980 141 12 32 chrX 121169699 121170931 -45479365 + Lx3A LINE L1 5769 6975 -6 2 1509 392 35 0 34 chrX 121170934 121170993 -45479303 + (TAAA)n Simple_repeat Simple_repeat 1 57 0 2 1509 558 0 0 0 chrX 121171043 121171105 -45479191 + (TC)n Simple_repeat Simple_repeat 2 63 0 2 1509 1226 24 0 71 chrX 121171845 121172053 -45478243 + L1Md_F2 LINE L1 6413 6582 0 2 1509 434 236 11 0 chrX 121172343 121172432 -45477864 + ID_B1 SINE B4 135 224 0 2 1509 344 318 216 13 chrX 121172603 121172746 -45477550 + B3A SINE B2 8 183 -15 2 1509 423 0 0 0 chrX 121172746 121172793 -45477503 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1509 646 311 19 9 chrX 121173124 121173335 -45476961 - ID_B1 SINE B4 -8 216 4 2 1509 1499 275 30 17 chrX 121173422 121173829 -45476467 + MTD LTR MaLR 3 414 -5 2 1509 317 336 26 26 chrX 121173920 121174036 -45476260 + PB1D10 SINE Alu 2 117 0 2 1509 276 53 0 0 chrX 121174036 121174074 -45476222 + (CAAAAA)n Simple_repeat Simple_repeat 1 38 0 2 1509 387 341 15 23 chrX 121174092 121174224 -45476072 + RSINE1 SINE B4 4 134 -31 2 1509 214 29 0 54 chrX 121174246 121174283 -45476013 + (TAA)n Simple_repeat Simple_repeat 3 37 0 2 1509 666 319 43 111 chrX 121174440 121174810 -45475486 - MTE2a LTR MaLR -34 345 1 2 1509 1543 323 153 40 chrX 121174811 121175563 -45474733 - MTE2a-int LTR MaLR -1 1579 743 2 1509 1053 316 26 30 chrX 121175576 121176008 -45474288 - MTE2a-int LTR MaLR -993 587 37 2 1509 30 27 0 0 chrX 121176186 121176223 -45474073 + AT_rich Low_complexity Low_complexity 1 37 0 2 1509 411 21 0 0 chrX 121176320 121176368 -45473928 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1509 329 335 58 15 chrX 121176385 121176591 -45473705 - Lx9 LINE L1 -205 7439 7225 2 1509 397 259 35 78 chrX 121176645 121176787 -45473509 - Lx9 LINE L1 -547 7097 6962 2 1509 198 0 0 0 chrX 121177348 121177370 -45472926 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 2 1509 2884 53 53 3 chrX 121177641 121178018 -45472278 + MTA_Mm LTR MaLR 1 396 0 2 1509 246 128 0 0 chrX 121178431 121178470 -45471826 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 1509 215 143 24 0 chrX 121178540 121178582 -45471714 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1509 756 61 0 0 chrX 121178582 121178680 -45471616 + (GA)n Simple_repeat Simple_repeat 2 99 0 2 1509 570 270 123 41 chrX 121178718 121178961 -45471335 - Lx7 LINE L1 -398 7298 7036 2 1509 347 239 0 32 chrX 121179871 121179966 -45470330 - RNLTR23 LTR ERVK 0 642 551 3 1509 264 30 0 0 chrX 121179966 121179999 -45470297 + (A)n Simple_repeat Simple_repeat 1 33 0 3 1509 22 0 0 0 chrX 121180390 121180412 -45469884 + AT_rich Low_complexity Low_complexity 1 22 0 3 1509 4494 111 5 99 chrX 121180818 121181658 -45468638 + L1Md_F LINE L1 360 1120 -5399 3 1509 4783 65 0 2 chrX 121181661 121182282 -45468014 + L1Md_F2 LINE L1 5963 6582 0 3 1509 1534 234 65 31 chrX 121182502 121182948 -45467348 - Lx2B LINE L1 -5 6995 6535 3 1509 812 160 26 7 chrX 121182952 121183103 -45467193 - Lx2B LINE L1 -691 6309 6156 3 1509 380 342 16 24 chrX 121183126 121183249 -45467047 - B3 SINE B2 -93 123 2 3 1509 1169 75 0 0 chrX 121183482 121183628 -45466668 + B1_Mm SINE Alu 2 147 0 3 1509 366 123 0 0 chrX 121183628 121183685 -45466611 + (A)n Simple_repeat Simple_repeat 1 57 0 3 1509 227 103 0 25 chrX 121183881 121183921 -45466375 + (TATG)n Simple_repeat Simple_repeat 4 42 0 3 1509 1124 256 57 85 chrX 121184743 121185131 -45465165 - ORR1C2 LTR MaLR 0 384 8 3 1509 771 169 0 7 chrX 121185146 121185301 -45464995 - Lx2 LINE L1 0 6997 6844 3 1509 1910 179 5 10 chrX 121185301 121185686 -45464610 + Lx2 LINE L1 5904 6286 -711 3 1509 282 87 0 0 chrX 121185723 121185769 -45464527 + (TCTCTG)n Simple_repeat Simple_repeat 2 47 0 3 1509 206 156 0 22 chrX 121185769 121185806 -45464490 + CT-rich Low_complexity Low_complexity 1 37 0 3 1509 288 0 0 0 chrX 121185827 121185859 -45464437 + (TGG)n Simple_repeat Simple_repeat 1 32 0 3 1509 434 310 29 92 chrX 121185873 121186047 -45464249 - RSINE1 SINE B4 0 165 3 3 1509 609 40 0 0 chrX 121186163 121186239 -45464057 + (GGAA)n Simple_repeat Simple_repeat 2 77 0 3 1509 887 252 144 48 chrX 121186367 121186619 -45463677 + ORR1D2 LTR MaLR 24 304 -66 3 1509 188 0 74 0 chrX 121186619 121186646 -45463650 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 3 1509 887 252 144 48 chrX 121186646 121186706 -45463590 + ORR1D2 LTR MaLR 305 366 -4 3 1509 443 270 84 15 chrX 121186778 121186981 -45463315 + L1MD3 LINE L1 7766 7982 -13 3 1509 189 74 0 0 chrX 121187590 121187617 -45462679 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1509 2680 273 56 27 chrX 121187882 121188868 -45461428 - RMER1B Other Other -4 1062 106 3 1509 1109 259 19 22 chrX 121188871 121189140 -45461156 + ORR1B1 LTR MaLR 116 383 -11 3 1509 983 121 81 0 chrX 121189374 121189514 -45460782 + Lx3C LINE L1 5889 6028 -948 3 1509 774 32 0 0 chrX 121189514 121189607 -45460689 + (GA)n Simple_repeat Simple_repeat 2 94 0 3 1509 983 121 81 0 chrX 121189607 121189639 -45460657 + Lx3C LINE L1 6029 6073 -903 3 1509 655 141 30 21 chrX 121189643 121189788 -45460508 + RMER17D2 LTR ERVK 703 906 0 3 1509 680 306 46 45 chrX 121191120 121191651 -45458645 + RLTR6-int LTR ERV1 7158 7640 -138 3 1509 309 179 0 0 chrX 121192411 121192495 -45457801 + A-rich Low_complexity Low_complexity 2 85 0 3 1509 2472 151 26 26 chrX 121192495 121192628 -45457668 + Lx3_Mus LINE L1 5784 5910 -1099 3 1509 183 42 0 0 chrX 121192628 121192652 -45457644 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 3 1509 2472 151 26 26 chrX 121192652 121192975 -45457321 + Lx3_Mus LINE L1 5911 6240 -769 3 1509 4983 116 7 4 chrX 121192971 121193717 -45456579 - L1_Mm LINE L1 -180 5703 4956 3 1509 297 321 0 0 chrX 121193821 121193902 -45456394 - ORR1D2 LTR MaLR -284 86 6 3 1509 907 277 99 50 chrX 121194221 121194609 -45455687 + MT2A LTR ERVL 1 530 -54 3 1509 477 0 0 0 chrX 121194609 121194662 -45455634 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1509 225 314 113 141 chrX 121194662 121194707 -45455589 + MT2A LTR ERVL 531 582 -2 3 1509 2479 196 51 12 chrX 121194807 121195297 -45454999 - Lx2B LINE L1 -6 6994 6486 3 1509 2835 211 16 11 chrX 121195299 121195914 -45454382 + Lx2B LINE L1 5104 5721 -165 3 1509 278 211 76 119 chrX 121195918 121196036 -45454260 + MT2B LTR ERVL 152 264 -337 3 1509 644 157 0 0 chrX 121195969 121196071 -45454225 + B1_Mus2 SINE Alu 46 147 0 3 1509 414 75 0 36 chrX 121196071 121196154 -45454142 + (CAAAA)n Simple_repeat Simple_repeat 1 80 0 3 1509 189 94 0 0 chrX 121196189 121196221 -45454075 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 3 1509 2484 157 16 35 chrX 121196221 121196709 -45453587 + Lx2B LINE L1 5804 6282 -718 3 1509 276 356 11 0 chrX 121196914 121197001 -45453295 + RSINE1 SINE B4 68 155 -10 3 1509 256 200 0 0 chrX 121197059 121197104 -45453192 - L1_Mur3 LINE L1 -2356 3524 3480 3 1509 21 71 0 0 chrX 121197234 121197276 -45453020 + AT_rich Low_complexity Low_complexity 1 42 0 3 1509 2595 82 3 0 chrX 121197300 121197653 -45452643 - RLTR13A LTR ERVK -501 354 1 3 1509 299 346 52 8 chrX 121198621 121198755 -45451541 - HAL1 LINE L1 -2198 309 170 3 1509 1895 243 76 33 chrX 121198919 121199430 -45450866 + RLTR20B3 LTR ERVK 1 533 -44 3 1509 1257 277 84 20 chrX 121199898 121200241 -45450055 - ORR1D1 LTR MaLR -1 373 9 3 1509 261 250 7 66 chrX 121200309 121200396 -45449900 + MTE2a LTR MaLR 3 82 -337 3 1509 1051 103 0 0 chrX 121200396 121200542 -45449754 + B1_Mm SINE Alu 2 147 0 3 1509 371 279 18 97 chrX 121200542 121200683 -45449613 + MTE2a LTR MaLR 68 169 -210 3 1509 7117 50 2 2 chrX 121200694 121201592 -45448704 + L1Md_F3 LINE L1 5673 6570 -14 3 1509 342 303 73 87 chrX 121201594 121201800 -45448496 + MTE2a LTR MaLR 167 369 -10 3 1509 201 39 0 0 chrX 121202273 121202299 -45447997 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1509 829 275 21 10 chrX 121202310 121202700 -45447596 + Lx4B LINE L1 904 1295 -5362 3 1509 964 289 101 108 chrX 121202702 121203478 -45446818 + RLTR22_Mur LTR ERVK 33 802 -1046 3 1509 374 322 20 27 chrX 121203624 121203771 -45446525 + RMER12 LTR ERVK 1104 1249 -73 3 1509 6200 237 42 108 chrX 121203771 121208289 -45442007 + Lx4B LINE L1 2882 7425 -35 3 1509 525 240 212 63 chrX 121208279 121208459 -45441837 - Lx7 LINE L1 -29 7667 7436 3 1509 450 125 0 0 chrX 121208459 121208539 -45441757 + (CA)n Simple_repeat Simple_repeat 2 81 0 3 1509 525 240 212 63 chrX 121208539 121208660 -45441636 - Lx7 LINE L1 -261 7435 7319 3 1509 2246 102 16 3 chrX 121208660 121208983 -45441313 - ORR1A2 LTR MaLR 0 327 1 3 1509 525 240 212 63 chrX 121208983 121208996 -45441300 - Lx7 LINE L1 -378 7318 7306 3 1509 1853 196 12 0 chrX 121208991 121209333 -45440963 + Lx7 LINE L1 6657 7002 -694 3 1509 531 289 0 27 chrX 121209439 121209585 -45440711 - MT2A LTR ERVL -391 142 1 3 1509 433 146 73 0 chrX 121209585 121209667 -45440629 - MERVL_2A-int LTR ERVL 0 5761 5674 3 1509 2894 257 45 12 chrX 121209789 121210538 -45439758 - ORR1D-int LTR MaLR -142 1228 455 3 1509 400 312 51 15 chrX 121210547 121210824 -45439472 + Lx8 LINE L1 5427 5703 -177 3 1509 511 332 21 12 chrX 121211168 121211409 -45438887 + Lx8 LINE L1 6332 6574 -899 3 1509 5039 93 16 14 chrX 121211771 121213167 -45437129 - L1Md_F LINE L1 -3979 1904 505 3 1509 762 207 7 0 chrX 121213196 121213336 -45436960 + L1_Mm LINE L1 5545 5685 -198 3 1509 4142 64 6 4 chrX 121213339 121213888 -45436408 - L1Md_F3 LINE L1 -1 6583 6034 3 1509 3514 50 2 0 chrX 121213888 121214363 -45435933 + L1Md_F3 LINE L1 5548 6023 -561 3 1509 5938 112 4 11 chrX 121214362 121215262 -45435034 + L1_Mus2 LINE L1 5673 6566 0 3 1509 1024 208 27 14 chrX 121215266 121215558 -45434738 + L1_Mur3 LINE L1 2992 3287 -2593 3 1509 877 244 36 25 chrX 121215578 121215856 -45434440 + Lx7 LINE L1 5620 5900 -1796 3 1509 2112 192 24 31 chrX 121215859 121216099 -45434197 + MTC LTR MaLR 1 237 -184 3 1509 6297 106 6 1 chrX 121216099 121216988 -45433308 - RLTR13B1 LTR ERVK 0 893 1 3 1509 2112 192 24 31 chrX 121216988 121217171 -45433125 + MTC LTR MaLR 238 421 0 3 1509 360 340 18 27 chrX 121217177 121217401 -45432895 + Lx6 LINE L1 5905 6126 -1334 3 1509 282 298 0 39 chrX 121217396 121217525 -45432771 + Lx6 LINE L1 7322 7445 -15 3 1509 1364 218 20 73 chrX 121217891 121218233 -45432063 + RLTR21 LTR ERVK 1 324 -1248 3 1509 853 179 0 43 chrX 121218283 121218470 -45431826 + RLTR21 LTR ERVK 550 728 -844 3 1509 29165 72 2 0 chrX 121218470 121223057 -45427239 - L1Md_F2 LINE L1 -16 6566 1970 3 1509 492 18 0 0 chrX 121223167 121223224 -45427072 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1509 507 33 0 0 chrX 121223224 121223284 -45427012 + (GA)n Simple_repeat Simple_repeat 2 62 0 3 1509 518 52 26 0 chrX 121223830 121223907 -45426389 + (CATA)n Simple_repeat Simple_repeat 2 80 0 3 1509 372 43 0 0 chrX 121224077 121224123 -45426173 + (T)n Simple_repeat Simple_repeat 1 46 0 3 1509 8573 40 17 0 chrX 121224126 121225442 -45424854 - L1Md_T LINE L1 0 6582 5208 3 1509 34 24 0 0 chrX 121226217 121226258 -45424038 + AT_rich Low_complexity Low_complexity 1 41 0 3 1509 6263 79 43 7 chrX 121227116 121228484 -45421812 - L1Md_F2 LINE L1 0 6582 5181 3 1509 30119 83 5 6 chrX 121228475 121233547 -45416749 + L1Md_A LINE L1 403 5468 -415 3 1509 1369 109 84 15 chrX 121233534 121233795 -45416501 - L1_Mur1 LINE L1 -939 4947 4669 3 1509 4024 168 4 13 chrX 121233795 121234548 -45415748 - L1_Mus3 LINE L1 -6 6632 5887 3 1509 2306 53 66 0 chrX 121234548 121234859 -45415437 + RLTR10 LTR ERVK 1 332 -58 3 1509 1138 172 100 38 chrX 121234859 121235164 -45415132 + IAPEY3_LTR LTR ERVK 1 388 -2 3 1509 1094 93 7 0 chrX 121235197 121235348 -45414948 - RLTR10 LTR ERVK -238 152 1 3 1509 753 32 0 0 chrX 121235348 121235441 -45414855 - RLTR10-int LTR ERVK -1 1986 1894 3 1509 404 207 0 0 chrX 121235460 121235542 -45414754 - IAP-d-int LTR ERVK -1415 5127 5046 3 1509 1287 70 6 0 chrX 121235550 121235722 -45414574 - RLTR10-int LTR ERVK -7408 173 1 3 1509 3065 57 10 0 chrX 121235724 121236108 -45414188 - RLTR10 LTR ERVK -2 388 1 3 1509 1846 39 0 0 chrX 121236108 121236337 -45413959 - RLTR10-int LTR ERVK -1 1986 1758 3 1509 2656 145 0 19 chrX 121236337 121236800 -45413496 - L1Md_F LINE L1 -5683 836 383 3 1509 1520 136 8 8 chrX 121236800 121237066 -45413230 - L1VL1 LINE L1 -6156 266 1 3 1509 846 169 20 69 chrX 121237106 121237309 -45412987 - B2_Mm2 SINE B2 -2 193 1 3 1509 497 202 0 0 chrX 121237382 121237466 -45412830 - B1_Mur4 SINE Alu -54 96 13 3 1509 22 0 0 30 chrX 121237532 121237552 -45412744 + AT_rich Low_complexity Low_complexity 1 20 0 3 1509 554 217 124 60 chrX 121237552 121237753 -45412543 - B3 SINE B2 -1 215 2 3 1509 22 0 0 30 chrX 121237753 121237765 -45412531 + AT_rich Low_complexity Low_complexity 1 12 0 3 1509 640 167 0 17 chrX 121237776 121237892 -45412404 - B1_Mus1 SINE Alu 0 148 35 3 1509 182 200 0 28 chrX 121237967 121238003 -45412293 + L2 LINE L2 1348 1382 -2037 3 1509 2585 137 24 33 chrX 121238043 121238503 -45411793 + Lx3_Mus LINE L1 6548 7003 -6 3 1509 235 364 15 22 chrX 121238644 121238779 -45411517 + B3A SINE B2 1 134 -64 3 1509 276 185 0 0 chrX 121238825 121238879 -45411417 + (CG)n Simple_repeat Simple_repeat 2 55 0 3 1509 4180 112 3 0 chrX 121239092 121239701 -45410595 - L1_Mus2 LINE L1 -3 6563 5953 4 1509 596 267 12 0 chrX 121239935 121240096 -45410200 - Lx7 LINE L1 -789 6907 6745 4 1509 781 325 67 8 chrX 121240902 121241262 -45409034 - MTD LTR MaLR -8 411 31 4 1510 21 89 0 0 chrX 121242497 121242553 -45407743 + AT_rich Low_complexity Low_complexity 1 56 0 4 1510 21 57 0 0 chrX 121243904 121243939 -45406357 + AT_rich Low_complexity Low_complexity 1 35 0 4 1510 706 175 28 0 chrX 121244082 121244225 -45406071 - Lx2 LINE L1 -73 6924 6778 4 1510 28 48 0 0 chrX 121244299 121244341 -45405955 + AT_rich Low_complexity Low_complexity 1 42 0 4 1510 48 43 0 0 chrX 121244431 121244500 -45405796 + AT_rich Low_complexity Low_complexity 1 69 0 4 1510 267 404 27 20 chrX 121244530 121244679 -45405617 - B3A SINE B2 -39 159 10 4 1510 208 147 0 0 chrX 121245174 121245208 -45405088 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1510 456 51 0 0 chrX 121246821 121246880 -45403416 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 1510 189 0 0 0 chrX 121246880 121246900 -45403396 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 1510 408 55 0 0 chrX 121246902 121246957 -45403339 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1510 305 143 0 0 chrX 121247425 121247474 -45402822 - B1_Mus1 SINE Alu -98 50 2 4 1510 1082 264 32 3 chrX 121252496 121252868 -45397428 + L1VL4 LINE L1 525 907 -5395 4 1510 705 255 38 0 chrX 121252875 121253087 -45397209 + L1_Mur2 LINE L1 220 439 -6273 4 1510 9643 104 21 13 chrX 121253116 121254534 -45395762 - L1_Mus2 LINE L1 -1 6565 5173 4 1510 800 182 14 0 chrX 121254534 121254677 -45395619 - B1_Mus2 SINE Alu -1 146 2 4 1510 9643 127 41 24 chrX 121254677 121255692 -45394604 - L1_Mus2 LINE L1 -711 5172 4105 4 1510 368 287 40 39 chrX 121255697 121256002 -45394294 + L1Md_F2 LINE L1 352 840 -5776 4 1510 335 86 36 24 chrX 121256668 121256751 -45393545 + (TTTG)n Simple_repeat Simple_repeat 1 84 0 4 1510 30873 88 4 8 chrX 121257573 121262758 -45387538 + L1Md_F2 LINE L1 419 5584 -299 4 1510 7687 61 3 5 chrX 121262760 121263758 -45386538 + L1Md_F2 LINE L1 5587 6582 0 4 1510 201 39 0 0 chrX 121263800 121263826 -45386470 + (TAAAA)n Simple_repeat Simple_repeat 3 28 0 4 1510 280 73 0 24 chrX 121263841 121263883 -45386413 - ORR1C2 LTR MaLR -336 48 8 4 1510 708 201 0 7 chrX 121263899 121264054 -45386242 - Lx2 LINE L1 0 6997 6844 4 1510 1781 176 32 8 chrX 121264054 121264426 -45385870 + Lx2 LINE L1 5904 6284 -713 4 1510 378 114 0 0 chrX 121264469 121264539 -45385757 + (TCTCTG)n Simple_repeat Simple_repeat 2 71 0 4 1510 213 39 0 0 chrX 121264591 121264617 -45385679 + (TGG)n Simple_repeat Simple_repeat 1 26 0 4 1510 369 62 0 0 chrX 121264617 121264665 -45385631 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1510 550 301 37 0 chrX 121264688 121264824 -45385472 - RSINE1 SINE B4 -22 143 3 4 1510 534 70 0 0 chrX 121264942 121265013 -45385283 + (GGAA)n Simple_repeat Simple_repeat 3 73 0 4 1510 775 262 110 118 chrX 121265140 121265486 -45384810 + ORR1D2 LTR MaLR 24 366 -4 4 1510 359 278 90 15 chrX 121265549 121265750 -45384546 + L1MD3 LINE L1 7767 7982 -13 4 1510 3204 35 102 45 chrX 121266245 121266694 -45383602 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1510 2437 273 57 24 chrX 121267104 121268085 -45382211 - RMER1B Other Other -4 1062 106 4 1510 1142 251 22 22 chrX 121268088 121268361 -45381935 + ORR1B1 LTR MaLR 116 388 -6 4 1510 894 128 87 0 chrX 121268590 121268730 -45381566 + Lx3C LINE L1 5889 6028 -948 4 1510 594 28 0 0 chrX 121268730 121268802 -45381494 + (GA)n Simple_repeat Simple_repeat 2 73 0 4 1510 894 128 87 0 chrX 121268802 121268833 -45381463 + Lx3C LINE L1 6029 6073 -903 4 1510 628 167 23 23 chrX 121268836 121268982 -45381314 + RMER17D2 LTR ERVK 703 906 0 4 1510 25 0 0 0 chrX 121268992 121269017 -45381279 + AT_rich Low_complexity Low_complexity 1 25 0 4 1510 383 330 43 43 chrX 121270524 121270825 -45379471 + MuLV-int LTR ERV1 7159 7459 -147 4 1510 2498 129 29 29 chrX 121271657 121271788 -45378508 + Lx3_Mus LINE L1 5786 5912 -1097 4 1510 216 0 0 0 chrX 121271788 121271812 -45378484 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 4 1510 2498 129 29 29 chrX 121271812 121272135 -45378161 + Lx3_Mus LINE L1 5913 6240 -769 4 1510 4670 118 8 5 chrX 121272131 121272881 -45377415 - L1_Mm LINE L1 -180 5703 4952 4 1510 991 274 89 32 chrX 121273377 121273770 -45376526 + MT2A LTR ERVL 1 551 -50 4 1510 378 0 0 0 chrX 121273770 121273812 -45376484 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1510 413 335 80 73 chrX 121273812 121273858 -45376438 + MT2A LTR ERVL 552 599 -2 4 1510 2313 199 50 16 chrX 121273959 121274460 -45375836 - Lx2B LINE L1 -6 6994 6477 4 1510 2405 219 17 12 chrX 121274451 121275039 -45375257 + Lx2B LINE L1 5104 5694 -192 4 1510 8274 89 9 12 chrX 121275019 121277112 -45373184 + L1Md_Gf LINE L1 248 2430 -3456 4 1510 384 19 0 0 chrX 121277116 121277169 -45373127 + L1Md_T LINE L1 6530 6582 0 4 1510 269 122 0 0 chrX 121277253 121277294 -45373002 + Lx2B LINE L1 5682 5722 -1275 4 1510 351 181 67 118 chrX 121277294 121277413 -45372883 + MT2B LTR ERVL 152 264 -337 4 1510 697 127 76 45 chrX 121277316 121277448 -45372848 + B1_Mus1 SINE Alu 13 148 0 4 1510 488 195 24 20 chrX 121277475 121277627 -45372669 + Lx2B LINE L1 5759 5921 -1088 4 1510 269 122 0 0 chrX 121277703 121277744 -45372552 + Lx2B LINE L1 5682 5722 -1275 4 1510 351 181 67 118 chrX 121277744 121277863 -45372433 + MT2B LTR ERVL 152 264 -337 4 1510 697 127 76 45 chrX 121277766 121277898 -45372398 + B1_Mus1 SINE Alu 13 148 0 4 1510 183 100 0 0 chrX 121277898 121277928 -45372368 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1510 2450 183 7 35 chrX 121277931 121278480 -45371816 + Lx2B LINE L1 5759 6292 -708 4 1510 310 323 42 42 chrX 121278487 121278652 -45371644 - L1M2 LINE L1 -2222 3921 3757 4 1510 312 343 10 10 chrX 121278663 121278763 -45371533 + RSINE1 SINE B4 56 155 -10 4 1510 251 182 0 0 chrX 121278823 121278867 -45371429 - L1_Mm LINE L1 -2355 3528 3485 4 1510 321 271 87 35 chrX 121278922 121279094 -45371202 - L1M2 LINE L1 -2678 3465 3285 4 1510 230 385 19 0 chrX 121280011 121280115 -45370181 - HAL1 LINE L1 -2198 309 204 4 1510 1955 245 78 18 chrX 121280310 121280813 -45369483 + RLTR20B3 LTR ERVK 1 533 -44 4 1510 1146 291 84 20 chrX 121281277 121281621 -45368675 - ORR1D1 LTR MaLR 0 374 9 4 1510 357 335 83 119 chrX 121281691 121281780 -45368516 + MTE2a LTR MaLR 1 97 -322 4 1510 1045 103 7 0 chrX 121281780 121281925 -45368371 + B1_Mm SINE Alu 2 147 0 4 1510 650 310 65 71 chrX 121281925 121282260 -45368036 + MTE2a LTR MaLR 68 405 -14 4 1510 784 294 8 6 chrX 121282747 121283106 -45367190 + Lx5 LINE L1 903 1262 -6466 4 1510 1026 278 116 80 chrX 121283106 121283911 -45366385 + RLTR22_Mur LTR ERVK 1 802 -1046 4 1510 325 337 178 5 chrX 121283994 121284185 -45366111 + RLTR22_Mur LTR ERVK 1010 1233 -89 4 1510 5359 241 34 89 chrX 121284699 121289170 -45361126 + Lx5 LINE L1 2881 7031 -19 4 1510 468 250 127 6 chrX 121289168 121289341 -45360955 - Lx7 LINE L1 -29 7667 7474 4 1510 621 101 0 0 chrX 121289347 121289446 -45360850 + (CA)n Simple_repeat Simple_repeat 1 99 0 4 1510 2187 115 16 3 chrX 121289567 121289890 -45360406 - ORR1A2 LTR MaLR 0 327 1 4 1510 1771 200 9 0 chrX 121289895 121290240 -45360056 + Lx7 LINE L1 6655 7002 -694 4 1510 572 275 0 21 chrX 121290346 121290491 -45359805 - MT2A LTR ERVL -391 142 1 4 1510 372 127 28 0 chrX 121290491 121290562 -45359734 - MERVL_2A-int LTR ERVL 0 5761 5689 4 1510 2948 254 47 11 chrX 121290694 121291441 -45358855 - ORR1A2-int LTR MaLR -142 1228 455 4 1510 359 258 65 34 chrX 121291450 121291727 -45358569 + Lx8 LINE L1 5447 5672 -175 4 1510 477 324 21 12 chrX 121292071 121292312 -45357984 + Lx8 LINE L1 6332 6574 -899 4 1510 1772 150 124 54 chrX 121292454 121292897 -45357399 - IAPLTR2_Mm LTR ERVK -1 474 1 4 1510 5688 75 31 4 chrX 121292897 121293704 -45356592 - IAPEz-int LTR ERVK 0 6481 5653 4 1510 2445 85 0 3 chrX 121293699 121294042 -45356254 - IAPEz-int LTR ERVK -4781 1700 1359 4 1510 3130 91 0 16 chrX 121294042 121294621 -45355675 - IAPEz-int LTR ERVK -5819 662 168 4 1510 250 283 0 0 chrX 121294621 121294674 -45355622 - RLTR27 LTR ERVK -34 275 223 4 1510 887 115 119 11 chrX 121294674 121294841 -45355455 - IAPEz-int LTR ERVK -6286 195 8 4 1510 1801 143 108 58 chrX 121294841 121295293 -45355003 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1510 4651 109 57 11 chrX 121295510 121297042 -45353254 - L1Md_F LINE L1 -3979 1904 301 4 1510 753 196 7 4 chrX 121297051 121297207 -45353089 + L1_Mm LINE L1 5524 5681 -202 4 1510 1048 193 18 44 chrX 121297214 121297442 -45352854 + RLTR21 LTR ERVK 103 324 -1248 4 1510 1914 188 93 42 chrX 121297496 121298076 -45352220 + RLTR21 LTR ERVK 560 1254 -150 4 1510 315 0 0 0 chrX 121298076 121298111 -45352185 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1510 602 214 60 71 chrX 121298228 121298419 -45351877 - ORR1B2 LTR MaLR -172 212 1 4 1510 257 227 0 15 chrX 121298454 121298521 -45351775 + GA-rich Low_complexity Low_complexity 1 66 0 4 1510 211 136 17 17 chrX 121298529 121298589 -45351707 + (CATA)n Simple_repeat Simple_repeat 1 60 0 4 1510 513 175 261 7 chrX 121299911 121300046 -45350250 + B2_Mm2 SINE B2 1 170 -46 4 1510 216 0 0 0 chrX 121300047 121300071 -45350225 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 4 1510 668 64 0 11 chrX 121300078 121300173 -45350123 + (GGAA)n Simple_repeat Simple_repeat 3 96 0 4 1510 1098 89 0 32 chrX 121300194 121300379 -45349917 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 4 1510 823 174 0 11 chrX 121300393 121300573 -45349723 + GA-rich Low_complexity Low_complexity 3 180 0 4 1510 1146 65 0 29 chrX 121300603 121300810 -45349486 + (GAAA)n Simple_repeat Simple_repeat 1 200 0 4 1510 2891 119 7 2 chrX 121301557 121301994 -45348302 - L1_Mus3 LINE L1 -7 6631 6193 4 1510 22 56 0 0 chrX 121304829 121304865 -45345431 + AT_rich Low_complexity Low_complexity 1 36 0 4 1510 7347 15 2 0 chrX 121304969 121305789 -45344507 - RLTR13B2 LTR ERVK 0 822 1 4 1510 464 0 0 18 chrX 121307139 121307196 -45343100 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 4 1510 1095 131 0 6 chrX 121307996 121308165 -45342131 - B2_Mm2 SINE B2 -27 168 1 4 1510 328 342 4 4 chrX 121311739 121311943 -45338353 + MurSAT1 Satellite Satellite 1 204 0 4 1510 257 321 0 0 chrX 121312145 121312229 -45338067 + MurSAT1 Satellite Satellite 16 99 -21 4 1510 295 292 15 10 chrX 121312482 121312593 -45337703 + MurSAT1 Satellite Satellite 1 111 -4 4 1510 253 283 33 28 chrX 121313103 121313227 -45337069 + MurSAT1 Satellite Satellite 1 124 -2 4 1510 228 340 0 0 chrX 121313658 121313755 -45336541 + MurSAT1 Satellite Satellite 1 97 -23 4 1510 250 323 15 5 chrX 121314220 121314396 -45335900 + MurSAT1 Satellite Satellite 1 177 -2 4 1510 234 330 0 0 chrX 121314807 121314904 -45335392 + MurSAT1 Satellite Satellite 1 97 -23 4 1510 278 318 15 5 chrX 121315357 121315533 -45334763 + MurSAT1 Satellite Satellite 1 177 -2 4 1510 253 308 14 14 chrX 121315884 121316041 -45334255 + MurSAT1 Satellite Satellite 1 157 0 4 1510 226 209 0 0 chrX 121317433 121317476 -45332820 + MurSAT1 Satellite Satellite 50 92 -28 5 1510 295 328 0 0 chrX 121317814 121317944 -45332352 + MurSAT1 Satellite Satellite 1 130 -1 5 1510 252 319 9 9 chrX 121317980 121318094 -45332202 + MurSAT1 Satellite Satellite 6 119 -1 5 1510 259 308 0 0 chrX 121318721 121318828 -45331468 + MurSAT1 Satellite Satellite 1 107 -4 5 1510 307 316 15 15 chrX 121319172 121319530 -45330766 + MurSAT1 Satellite Satellite 1 358 0 5 1510 285 321 9 9 chrX 121319760 121319870 -45330426 + MurSAT1 Satellite Satellite 1 110 -10 5 1510 246 321 9 9 chrX 121320293 121320403 -45329893 + MurSAT1 Satellite Satellite 1 110 -10 5 1510 254 315 5 0 chrX 121320509 121320653 -45329643 + MurSAT1 Satellite Satellite 1 144 0 5 1510 247 121 15 29 chrX 121323737 121323805 -45326491 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 5 1510 785 170 15 0 chrX 121323852 121323987 -45326309 + B1_Mus1 SINE Alu 4 140 -8 5 1510 779 105 0 8 chrX 121323992 121324126 -45326170 + (GAAA)n Simple_repeat Simple_repeat 2 134 0 5 1510 21 0 0 0 chrX 121324258 121324279 -45326017 + AT_rich Low_complexity Low_complexity 1 21 0 5 1510 777 151 50 0 chrX 121324373 121324512 -45325784 + B1_Mus1 SINE Alu 3 148 0 5 1510 679 156 0 22 chrX 121324512 121324650 -45325646 + GA-rich Low_complexity Low_complexity 2 136 0 5 1510 223 176 39 51 chrX 121324761 121324839 -45325457 + T-rich Low_complexity Low_complexity 2 78 0 5 1510 777 153 22 0 chrX 121325011 121325148 -45325148 + B1_Mus1 SINE Alu 3 142 -6 5 1510 261 57 0 0 chrX 121325321 121325356 -45324940 + (T)n Simple_repeat Simple_repeat 1 35 0 5 1510 255 120 13 39 chrX 121325444 121325522 -45324774 + (TTTG)n Simple_repeat Simple_repeat 2 77 0 5 1510 966 90 82 0 chrX 121325534 121325668 -45324628 - B1_Mus2 SINE Alu 0 147 3 5 1510 333 0 0 0 chrX 121325678 121325715 -45324581 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 1510 420 20 0 0 chrX 121325715 121325763 -45324533 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1510 22 0 0 0 chrX 121325768 121325790 -45324506 + AT_rich Low_complexity Low_complexity 1 22 0 5 1510 796 172 14 0 chrX 121325824 121325969 -45324327 + B1_Mus1 SINE Alu 2 148 0 5 1510 225 200 49 12 chrX 121326091 121326172 -45324124 + (TTTG)n Simple_repeat Simple_repeat 2 85 0 5 1510 685 209 0 7 chrX 121326340 121326475 -45323821 + B1_Mus1 SINE Alu 2 135 -13 5 1510 780 28 28 0 chrX 121326491 121326598 -45323698 + (GAAA)n Simple_repeat Simple_repeat 3 112 0 5 1510 243 0 0 0 chrX 121326629 121326656 -45323640 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1510 207 191 0 0 chrX 121326803 121326850 -45323446 + T-rich Low_complexity Low_complexity 1 47 0 5 1510 22 0 0 0 chrX 121326896 121326918 -45323378 + AT_rich Low_complexity Low_complexity 1 22 0 5 1510 809 157 7 0 chrX 121326951 121327091 -45323205 + B1_Mus1 SINE Alu 2 142 -6 5 1510 300 27 0 0 chrX 121327116 121327153 -45323143 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 5 1510 228 35 0 0 chrX 121327249 121327278 -45323018 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1510 202 178 0 0 chrX 121327384 121327416 -45322880 + T-rich Low_complexity Low_complexity 15 46 0 5 1510 533 52 0 13 chrX 121327416 121327494 -45322802 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 1510 202 178 0 0 chrX 121327494 121327506 -45322790 + T-rich Low_complexity Low_complexity 3 14 0 5 1510 914 143 7 0 chrX 121327557 121327697 -45322599 + B1_Mus1 SINE Alu 2 142 -6 5 1510 549 80 0 0 chrX 121327702 121327777 -45322519 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 5 1510 942 101 14 0 chrX 121328102 121328241 -45322055 + B1_Mus1 SINE Alu 2 142 -6 5 1510 516 93 0 0 chrX 121328267 121328342 -45321954 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 5 1510 2870 33 0 3 chrX 121328494 121328832 -45321464 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 1510 180 0 0 0 chrX 121328832 121328852 -45321444 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1510 885 129 7 0 chrX 121329013 121329152 -45321144 + B1_Mus1 SINE Alu 2 141 -7 5 1510 236 160 0 26 chrX 121329173 121329250 -45321046 + (CAAA)n Simple_repeat Simple_repeat 2 76 0 5 1510 200 200 0 0 chrX 121329286 121329336 -45320960 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 5 1510 216 0 0 0 chrX 121329374 121329398 -45320898 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1510 198 0 0 0 chrX 121329493 121329515 -45320781 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 5 1510 208 0 62 0 chrX 121329547 121329579 -45320717 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1510 790 171 0 7 chrX 121329643 121329784 -45320512 + B1_Mus1 SINE Alu 3 142 -6 5 1510 205 221 30 76 chrX 121329941 121330073 -45320223 + T-rich Low_complexity Low_complexity 1 126 0 5 1510 225 0 0 0 chrX 121330078 121330103 -45320193 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1510 562 182 25 106 chrX 121330163 121330323 -45319973 + B1_Mus1 SINE Alu 2 148 0 5 1510 606 63 0 0 chrX 121330333 121330412 -45319884 + (GGAA)n Simple_repeat Simple_repeat 3 81 0 5 1510 387 0 0 0 chrX 121330612 121330655 -45319641 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1510 24 32 0 0 chrX 121330664 121330695 -45319601 + AT_rich Low_complexity Low_complexity 1 31 0 5 1510 895 137 0 7 chrX 121330718 121330858 -45319438 + B1_Mus1 SINE Alu 3 141 -7 5 1510 318 115 0 0 chrX 121330862 121330923 -45319373 + (A)n Simple_repeat Simple_repeat 1 61 0 5 1510 235 238 0 56 chrX 121330997 121331086 -45319210 + T-rich Low_complexity Low_complexity 1 84 0 5 1510 959 103 13 27 chrX 121331108 121331257 -45319039 + B1_Mus1 SINE Alu 2 148 0 5 1510 324 0 0 0 chrX 121331466 121331502 -45318794 + (GTTTG)n Simple_repeat Simple_repeat 5 40 0 5 1510 994 137 0 0 chrX 121331531 121331677 -45318619 - B1_Mus2 SINE Alu 0 147 2 5 1510 407 19 19 0 chrX 121331694 121331746 -45318550 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1510 22 0 0 0 chrX 121331751 121331773 -45318523 + AT_rich Low_complexity Low_complexity 1 22 0 5 1510 801 178 7 0 chrX 121331807 121331953 -45318343 + B1_Mus1 SINE Alu 2 148 0 5 1510 261 0 0 0 chrX 121332115 121332144 -45318152 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 1510 799 164 0 15 chrX 121332311 121332447 -45317849 + B1_Mus1 SINE Alu 2 135 -13 5 1510 369 109 0 0 chrX 121332461 121332516 -45317780 + (A)n Simple_repeat Simple_repeat 1 55 0 5 1510 270 73 0 0 chrX 121332547 121332588 -45317708 + (TTTTTG)n Simple_repeat Simple_repeat 4 44 0 5 1510 329 75 0 19 chrX 121332901 121332955 -45317341 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1510 27 0 0 0 chrX 121332962 121332989 -45317307 + AT_rich Low_complexity Low_complexity 1 27 0 5 1510 780 159 14 7 chrX 121333024 121333163 -45317133 + B1_Mus1 SINE Alu 3 142 -6 5 1510 426 85 0 0 chrX 121333178 121333237 -45317059 + (GGAA)n Simple_repeat Simple_repeat 3 61 0 5 1510 471 35 0 0 chrX 121333322 121333379 -45316917 + (GGAA)n Simple_repeat Simple_repeat 3 59 0 5 1510 591 53 0 0 chrX 121333584 121333659 -45316637 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 1510 195 114 0 0 chrX 121333683 121333718 -45316578 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 5 1510 798 147 14 0 chrX 121333774 121333917 -45316379 + B1_Mus1 SINE Alu 4 148 0 5 1510 282 160 0 0 chrX 121333917 121333967 -45316329 + GA-rich Low_complexity Low_complexity 2 51 0 5 1510 905 132 14 0 chrX 121334237 121334381 -45315915 + B1_Mus1 SINE Alu 2 147 -1 5 1510 225 119 0 0 chrX 121334382 121334424 -45315872 + (A)n Simple_repeat Simple_repeat 1 42 0 5 1510 221 91 0 102 chrX 121334456 121334505 -45315791 + T-rich Low_complexity Low_complexity 1 44 0 5 1510 261 0 0 0 chrX 121334582 121334611 -45315685 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1510 324 143 0 0 chrX 121334666 121334736 -45315560 + (T)n Simple_repeat Simple_repeat 1 70 0 5 1510 838 125 20 27 chrX 121334778 121334926 -45315370 + B1_Mus1 SINE Alu 2 148 0 5 1510 207 0 0 0 chrX 121335039 121335062 -45315234 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1510 189 65 20 80 chrX 121335130 121335180 -45315116 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 5 1510 978 130 0 0 chrX 121335189 121335335 -45314961 - B1_Mus2 SINE Alu 0 147 2 5 1510 279 54 0 0 chrX 121335340 121335377 -45314919 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1510 27 29 0 0 chrX 121335382 121335416 -45314880 + AT_rich Low_complexity Low_complexity 1 34 0 5 1510 818 158 7 7 chrX 121335439 121335579 -45314717 + B1_Mus1 SINE Alu 3 142 -6 5 1510 533 115 11 0 chrX 121335584 121335671 -45314625 + (GAAA)n Simple_repeat Simple_repeat 2 89 0 5 1510 399 41 0 0 chrX 121335745 121335794 -45314502 + (GGAA)n Simple_repeat Simple_repeat 3 51 0 5 1510 573 55 0 0 chrX 121335998 121336071 -45314225 + (TA)n Simple_repeat Simple_repeat 2 74 0 5 1510 195 114 0 0 chrX 121336095 121336130 -45314166 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 5 1510 798 147 14 0 chrX 121336185 121336328 -45313968 + B1_Mus1 SINE Alu 4 148 0 5 1510 282 160 0 0 chrX 121336328 121336378 -45313918 + GA-rich Low_complexity Low_complexity 2 51 0 5 1510 905 132 14 0 chrX 121336647 121336791 -45313505 + B1_Mus1 SINE Alu 2 147 -1 5 1510 225 119 0 0 chrX 121336792 121336834 -45313462 + (A)n Simple_repeat Simple_repeat 1 42 0 5 1510 221 91 0 102 chrX 121336866 121336915 -45313381 + T-rich Low_complexity Low_complexity 1 44 0 5 1510 261 0 0 0 chrX 121336992 121337021 -45313275 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1510 300 155 0 0 chrX 121337076 121337147 -45313149 + T-rich Low_complexity Low_complexity 1 71 0 5 1510 838 125 20 27 chrX 121337189 121337337 -45312959 + B1_Mus1 SINE Alu 2 148 0 5 1510 213 146 0 0 chrX 121337525 121337573 -45312723 + (T)n Simple_repeat Simple_repeat 1 48 0 5 1510 970 137 0 0 chrX 121337604 121337750 -45312546 - B1_Mus2 SINE Alu 0 147 2 6 1510 438 20 0 0 chrX 121337761 121337812 -45312484 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1510 27 29 0 0 chrX 121337817 121337851 -45312445 + AT_rich Low_complexity Low_complexity 1 34 0 6 1510 796 171 7 0 chrX 121337873 121338019 -45312277 + B1_Mus1 SINE Alu 2 148 0 6 1510 225 0 0 0 chrX 121338019 121338044 -45312252 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1510 204 40 0 0 chrX 121338200 121338225 -45312071 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 6 1510 874 149 0 0 chrX 121338393 121338534 -45311762 + B1_Mus1 SINE Alu 2 142 -6 6 1510 184 30 29 29 chrX 121338536 121338570 -45311726 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 6 1510 299 65 0 21 chrX 121338806 121338853 -45311443 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1510 24 0 0 0 chrX 121338860 121338884 -45311412 + AT_rich Low_complexity Low_complexity 1 24 0 6 1510 797 171 7 0 chrX 121338918 121339058 -45311238 + B1_Mus1 SINE Alu 2 142 -6 6 1510 1029 132 0 0 chrX 121339063 121339230 -45311066 + (GAAA)n Simple_repeat Simple_repeat 2 168 0 6 1510 396 0 0 0 chrX 121339423 121339467 -45310829 + (TA)n Simple_repeat Simple_repeat 1 44 0 6 1510 213 39 0 0 chrX 121339494 121339520 -45310776 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 1510 30 27 0 0 chrX 121339522 121339559 -45310737 + AT_rich Low_complexity Low_complexity 1 37 0 6 1510 841 137 14 0 chrX 121339581 121339720 -45310576 + B1_Mus1 SINE Alu 2 142 -6 6 1510 1032 53 0 0 chrX 121339746 121339877 -45310419 + (GGAA)n Simple_repeat Simple_repeat 3 133 0 6 1510 24 32 0 0 chrX 121340099 121340130 -45310166 + AT_rich Low_complexity Low_complexity 1 31 0 6 1510 911 143 0 13 chrX 121340152 121340301 -45309995 + B1_Mus1 SINE Alu 2 148 0 6 1510 225 0 0 0 chrX 121340432 121340457 -45309839 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1510 317 335 102 4 chrX 121340481 121340706 -45309590 - L1M5 LINE L1 -2862 3284 3038 6 1510 891 119 14 7 chrX 121340712 121340856 -45309440 + B1_Mus1 SINE Alu 2 146 -2 6 1510 285 29 0 0 chrX 121341039 121341073 -45309223 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 6 1510 1052 96 0 7 chrX 121341113 121341260 -45309036 - B1_Mm SINE Alu 0 147 2 6 1510 297 51 0 0 chrX 121341265 121341304 -45308992 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1510 22 0 0 0 chrX 121341309 121341331 -45308965 + AT_rich Low_complexity Low_complexity 1 22 0 6 1510 804 178 7 0 chrX 121341365 121341511 -45308785 + B1_Mus1 SINE Alu 2 148 0 6 1510 189 0 0 0 chrX 121341666 121341687 -45308609 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 6 1510 788 157 0 22 chrX 121341854 121341991 -45308305 + B1_Mus1 SINE Alu 2 135 -13 6 1510 770 31 10 0 chrX 121342005 121342102 -45308194 + (GAAA)n Simple_repeat Simple_repeat 2 99 0 6 1510 258 106 0 0 chrX 121342133 121342180 -45308116 + (TTTTTG)n Simple_repeat Simple_repeat 4 50 0 6 1510 22 0 0 0 chrX 121342409 121342431 -45307865 + AT_rich Low_complexity Low_complexity 1 22 0 6 1510 822 150 7 0 chrX 121342465 121342605 -45307691 + B1_Mus1 SINE Alu 2 142 -6 6 1510 184 30 29 29 chrX 121342607 121342641 -45307655 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 6 1510 330 26 0 0 chrX 121342770 121342809 -45307487 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 6 1510 320 103 0 17 chrX 121342888 121342947 -45307349 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 1510 762 180 7 7 chrX 121343008 121343148 -45307148 + B1_Mus1 SINE Alu 3 142 -6 6 1510 483 63 0 0 chrX 121343166 121343229 -45307067 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 6 1510 543 31 0 0 chrX 121343314 121343379 -45306917 + (GGAA)n Simple_repeat Simple_repeat 3 67 0 6 1510 540 68 0 0 chrX 121343577 121343650 -45306646 + (TA)n Simple_repeat Simple_repeat 2 74 0 6 1510 214 171 0 0 chrX 121343676 121343717 -45306579 + T-rich Low_complexity Low_complexity 2 42 0 6 1510 767 141 14 7 chrX 121343764 121343907 -45306389 + B1_Mus1 SINE Alu 4 147 -1 6 1510 308 161 0 16 chrX 121343908 121343971 -45306325 + GA-rich Low_complexity Low_complexity 2 63 0 6 1510 855 144 7 14 chrX 121344246 121344394 -45305902 + B1_Mus1 SINE Alu 2 148 0 6 1510 270 95 0 0 chrX 121344394 121344436 -45305860 + (A)n Simple_repeat Simple_repeat 1 42 0 6 1510 31 44 0 0 chrX 121344466 121344511 -45305785 + AT_rich Low_complexity Low_complexity 1 45 0 6 1510 198 71 0 0 chrX 121344584 121344612 -45305684 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 6 1510 273 29 0 0 chrX 121344693 121344727 -45305569 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1510 832 125 20 14 chrX 121344772 121344918 -45305378 + B1_Mus1 SINE Alu 2 148 0 6 1510 309 51 0 0 chrX 121344929 121344968 -45305328 + (A)n Simple_repeat Simple_repeat 1 39 0 6 1510 30 45 0 0 chrX 121344998 121345042 -45305254 + AT_rich Low_complexity Low_complexity 1 44 0 6 1510 391 206 0 0 chrX 121345068 121345165 -45305131 + T-rich Low_complexity Low_complexity 1 97 0 6 1510 375 98 24 24 chrX 121345181 121345265 -45305031 + (TTTTG)n Simple_repeat Simple_repeat 2 85 0 6 1510 810 132 20 27 chrX 121345310 121345458 -45304838 + B1_Mus1 SINE Alu 2 148 0 6 1510 216 0 0 0 chrX 121345571 121345595 -45304701 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1510 214 64 0 78 chrX 121345660 121345711 -45304585 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 6 1510 961 129 0 7 chrX 121345743 121345891 -45304405 - B1_Mus2 SINE Alu 0 147 1 6 1510 264 30 0 0 chrX 121345903 121345936 -45304360 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1510 22 0 0 0 chrX 121345941 121345963 -45304333 + AT_rich Low_complexity Low_complexity 1 22 0 6 1510 797 178 7 0 chrX 121345997 121346143 -45304153 + B1_Mus1 SINE Alu 2 148 0 6 1510 261 0 0 0 chrX 121346306 121346335 -45303961 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 6 1510 839 157 0 0 chrX 121346503 121346637 -45303659 + B1_Mus1 SINE Alu 2 135 -13 6 1510 740 11 11 0 chrX 121346654 121346743 -45303553 + (GAAA)n Simple_repeat Simple_repeat 2 91 0 6 1510 180 97 0 0 chrX 121346774 121346805 -45303491 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 6 1510 21 0 0 0 chrX 121347042 121347063 -45303233 + AT_rich Low_complexity Low_complexity 1 21 0 6 1510 834 150 7 0 chrX 121347097 121347237 -45303059 + B1_Mus1 SINE Alu 2 142 -6 6 1510 184 30 29 29 chrX 121347239 121347273 -45303023 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 6 1510 299 65 0 21 chrX 121347515 121347562 -45302734 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1510 761 194 7 0 chrX 121347627 121347766 -45302530 + B1_Mus2 SINE Alu 2 141 -6 6 1510 636 140 0 0 chrX 121347771 121347878 -45302418 + (GAAA)n Simple_repeat Simple_repeat 2 108 0 6 1510 396 0 0 0 chrX 121348071 121348115 -45302181 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 1510 201 159 0 0 chrX 121348150 121348194 -45302102 + T-rich Low_complexity Low_complexity 2 45 0 6 1510 820 144 14 0 chrX 121348237 121348376 -45301920 + B1_Mus1 SINE Alu 2 142 -6 6 1510 714 117 0 0 chrX 121348383 121348494 -45301802 + (GGAA)n Simple_repeat Simple_repeat 3 113 0 6 1510 841 151 7 14 chrX 121348769 121348917 -45301379 + B1_Mus1 SINE Alu 2 148 0 6 1510 225 65 0 0 chrX 121348928 121348959 -45301337 + (A)n Simple_repeat Simple_repeat 1 31 0 6 1510 198 0 0 0 chrX 121349108 121349130 -45301166 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 6 1510 207 246 0 0 chrX 121349149 121349214 -45301082 + T-rich Low_complexity Low_complexity 4 68 0 6 1510 318 26 0 0 chrX 121349220 121349259 -45301037 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 1510 778 138 22 0 chrX 121349304 121349442 -45300854 + B1_Mus1 SINE Alu 2 142 -6 6 1510 198 0 0 0 chrX 121349525 121349547 -45300749 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1510 225 0 0 0 chrX 121349576 121349601 -45300695 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1510 22 70 0 0 chrX 121349613 121349656 -45300640 + AT_rich Low_complexity Low_complexity 1 43 0 6 1510 207 0 0 0 chrX 121349672 121349695 -45300601 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1510 353 111 0 0 chrX 121349715 121349769 -45300527 - PB1D9 SINE Alu -66 54 1 6 1510 318 243 27 13 chrX 121349769 121349781 -45300515 - B4 SINE B4 -153 139 72 6 1510 237 65 0 0 chrX 121349781 121349812 -45300484 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1510 806 159 14 0 chrX 121349873 121350018 -45300278 + B1_Mus1 SINE Alu 2 148 0 6 1510 204 40 0 0 chrX 121350182 121350207 -45300089 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 6 1510 851 157 0 0 chrX 121350375 121350509 -45299787 + B1_Mus1 SINE Alu 2 135 -13 6 1510 863 97 7 0 chrX 121350525 121350670 -45299626 + (GAAA)n Simple_repeat Simple_repeat 2 147 0 6 1510 258 106 0 0 chrX 121350701 121350748 -45299548 + (TTTTTG)n Simple_repeat Simple_repeat 4 50 0 6 1510 25 0 0 0 chrX 121350977 121351002 -45299294 + AT_rich Low_complexity Low_complexity 1 25 0 6 1510 774 164 7 0 chrX 121351036 121351176 -45299120 + B1_Mus1 SINE Alu 2 142 -6 6 1510 236 53 0 26 chrX 121351178 121351217 -45299079 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 6 1510 203 258 0 0 chrX 121351309 121351371 -45298925 + T-rich Low_complexity Low_complexity 1 62 0 6 1510 320 103 0 17 chrX 121351450 121351509 -45298787 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 1510 773 180 7 7 chrX 121351571 121351711 -45298585 + B1_Mus1 SINE Alu 3 142 -6 6 1510 396 59 0 0 chrX 121351732 121351783 -45298513 + (GGAA)n Simple_repeat Simple_repeat 3 53 0 6 1510 543 31 0 0 chrX 121351869 121351934 -45298362 + (GGAA)n Simple_repeat Simple_repeat 3 67 0 6 1510 1200 46 0 0 chrX 121352132 121352283 -45298013 + (TA)n Simple_repeat Simple_repeat 2 152 0 6 1510 214 171 0 0 chrX 121352309 121352350 -45297946 + T-rich Low_complexity Low_complexity 2 42 0 7 1510 767 141 14 7 chrX 121352398 121352541 -45297755 + B1_Mus1 SINE Alu 4 147 -1 7 1510 327 177 0 0 chrX 121352542 121352604 -45297692 + GA-rich Low_complexity Low_complexity 2 63 0 7 1510 855 144 7 14 chrX 121352879 121353027 -45297269 + B1_Mus1 SINE Alu 2 148 0 7 1510 315 85 0 0 chrX 121353027 121353074 -45297222 + (A)n Simple_repeat Simple_repeat 1 47 0 7 1510 30 45 0 0 chrX 121353104 121353148 -45297148 + AT_rich Low_complexity Low_complexity 1 44 0 7 1510 213 119 0 0 chrX 121353212 121353254 -45297042 + (T)n Simple_repeat Simple_repeat 1 42 0 7 1510 183 42 0 0 chrX 121353337 121353361 -45296935 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1510 832 125 20 14 chrX 121353406 121353552 -45296744 + B1_Mus1 SINE Alu 2 148 0 7 1510 228 67 0 0 chrX 121353563 121353593 -45296703 + (A)n Simple_repeat Simple_repeat 1 30 0 7 1510 33 43 0 0 chrX 121353623 121353670 -45296626 + AT_rich Low_complexity Low_complexity 1 47 0 7 1510 231 238 7 71 chrX 121353698 121353838 -45296458 + T-rich Low_complexity Low_complexity 2 132 0 7 1510 189 0 0 0 chrX 121353868 121353889 -45296407 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1510 259 58 0 71 chrX 121353950 121354006 -45296290 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 7 1510 971 122 0 7 chrX 121354030 121354178 -45296118 - B1_Mus2 SINE Alu 0 147 1 7 1510 264 30 0 0 chrX 121354190 121354223 -45296073 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1510 22 0 0 0 chrX 121354228 121354250 -45296046 + AT_rich Low_complexity Low_complexity 1 22 0 7 1510 797 178 7 0 chrX 121354284 121354430 -45295866 + B1_Mus1 SINE Alu 2 148 0 7 1510 297 0 0 0 chrX 121354593 121354626 -45295670 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 7 1510 873 142 0 0 chrX 121354794 121354928 -45295368 + B1_Mus1 SINE Alu 2 135 -13 7 1510 967 64 14 0 chrX 121354945 121355085 -45295211 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 7 1510 777 171 7 14 chrX 121355360 121355508 -45294788 + B1_Mus1 SINE Alu 2 148 0 7 1510 270 95 0 0 chrX 121355508 121355550 -45294746 + (A)n Simple_repeat Simple_repeat 1 42 0 7 1510 31 44 0 0 chrX 121355580 121355625 -45294671 + AT_rich Low_complexity Low_complexity 1 45 0 7 1510 198 71 0 0 chrX 121355698 121355726 -45294570 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 7 1510 273 29 0 0 chrX 121355807 121355841 -45294455 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 1510 811 139 20 14 chrX 121355886 121356032 -45294264 + B1_Mus1 SINE Alu 2 148 0 7 1510 309 51 0 0 chrX 121356043 121356082 -45294214 + (A)n Simple_repeat Simple_repeat 1 39 0 7 1510 30 45 0 0 chrX 121356112 121356156 -45294140 + AT_rich Low_complexity Low_complexity 1 44 0 7 1510 213 119 0 0 chrX 121356220 121356262 -45294034 + (T)n Simple_repeat Simple_repeat 1 42 0 7 1510 183 42 0 0 chrX 121356345 121356369 -45293927 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1510 811 139 20 14 chrX 121356414 121356560 -45293736 + B1_Mus1 SINE Alu 2 148 0 7 1510 228 67 0 0 chrX 121356571 121356601 -45293695 + (A)n Simple_repeat Simple_repeat 1 30 0 7 1510 33 43 0 0 chrX 121356631 121356678 -45293618 + AT_rich Low_complexity Low_complexity 1 47 0 7 1510 302 230 0 79 chrX 121356706 121356870 -45293426 + T-rich Low_complexity Low_complexity 24 174 0 7 1510 252 59 0 0 chrX 121356870 121356904 -45293392 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 1510 302 230 0 79 chrX 121356904 121356928 -45293368 + T-rich Low_complexity Low_complexity 2 23 0 7 1510 824 125 20 27 chrX 121356949 121357097 -45293199 + B1_Mus1 SINE Alu 2 148 0 7 1510 189 0 0 0 chrX 121357211 121357232 -45293064 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1510 259 58 0 71 chrX 121357293 121357349 -45292947 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 7 1510 971 122 0 7 chrX 121357373 121357521 -45292775 - B1_Mus2 SINE Alu 0 147 1 7 1510 264 30 0 0 chrX 121357533 121357566 -45292730 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1510 22 0 0 0 chrX 121357571 121357593 -45292703 + AT_rich Low_complexity Low_complexity 1 22 0 7 1510 797 178 7 0 chrX 121357627 121357773 -45292523 + B1_Mus1 SINE Alu 2 148 0 7 1510 297 0 0 0 chrX 121357936 121357969 -45292327 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 7 1510 873 142 0 0 chrX 121358137 121358271 -45292025 + B1_Mus1 SINE Alu 2 135 -13 7 1510 818 29 9 0 chrX 121358288 121358393 -45291903 + (GAAA)n Simple_repeat Simple_repeat 2 107 0 7 1510 183 114 0 0 chrX 121358424 121358459 -45291837 + (TTTTTG)n Simple_repeat Simple_repeat 4 38 0 7 1510 790 164 7 0 chrX 121358746 121358886 -45291410 + B1_Mus1 SINE Alu 2 142 -6 7 1510 184 30 29 29 chrX 121358888 121358922 -45291374 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 7 1510 216 261 0 61 chrX 121359016 121359163 -45291133 + T-rich Low_complexity Low_complexity 6 143 0 7 1510 299 65 0 21 chrX 121359165 121359212 -45291084 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1510 773 187 7 0 chrX 121359277 121359416 -45290880 + B1_Mus2 SINE Alu 2 141 -6 7 1510 516 72 0 0 chrX 121359422 121359491 -45290805 + (GGAA)n Simple_repeat Simple_repeat 3 71 0 7 1510 291 28 0 0 chrX 121359691 121359727 -45290569 + (TA)n Simple_repeat Simple_repeat 2 37 0 7 1510 201 159 0 0 chrX 121359762 121359806 -45290490 + T-rich Low_complexity Low_complexity 2 45 0 7 1510 820 144 14 0 chrX 121359849 121359988 -45290308 + B1_Mus1 SINE Alu 2 142 -6 7 1510 873 107 0 0 chrX 121359995 121360126 -45290170 + (GGAA)n Simple_repeat Simple_repeat 3 133 0 7 1510 841 151 7 14 chrX 121360399 121360547 -45289749 + B1_Mus1 SINE Alu 2 148 0 7 1510 225 65 0 0 chrX 121360558 121360589 -45289707 + (A)n Simple_repeat Simple_repeat 1 31 0 7 1510 198 0 0 0 chrX 121360739 121360761 -45289535 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 7 1510 228 231 0 0 chrX 121360782 121360847 -45289449 + T-rich Low_complexity Low_complexity 1 65 0 7 1510 351 44 0 0 chrX 121360850 121360895 -45289401 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 7 1510 778 138 22 0 chrX 121360940 121361078 -45289218 + B1_Mus1 SINE Alu 2 142 -6 7 1510 261 0 0 0 chrX 121361206 121361235 -45289061 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1510 22 70 0 0 chrX 121361247 121361290 -45289006 + AT_rich Low_complexity Low_complexity 1 43 0 7 1510 283 39 0 73 chrX 121361306 121361361 -45288935 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 7 1510 998 116 0 7 chrX 121361385 121361533 -45288763 - B1_Mus2 SINE Alu 0 147 1 7 1510 237 65 0 0 chrX 121361545 121361576 -45288720 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 1510 22 0 0 0 chrX 121361581 121361603 -45288693 + AT_rich Low_complexity Low_complexity 1 22 0 7 1510 806 159 14 0 chrX 121361637 121361782 -45288514 + B1_Mus1 SINE Alu 2 148 0 7 1510 204 40 0 0 chrX 121361946 121361971 -45288325 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 7 1510 873 142 0 0 chrX 121362139 121362273 -45288023 + B1_Mus1 SINE Alu 2 135 -13 7 1510 1106 42 7 0 chrX 121362291 121362435 -45287861 + (GAAA)n Simple_repeat Simple_repeat 3 147 0 7 1510 258 106 0 0 chrX 121362466 121362513 -45287783 + (TTTTTG)n Simple_repeat Simple_repeat 4 50 0 7 1510 23 0 0 0 chrX 121362742 121362765 -45287531 + AT_rich Low_complexity Low_complexity 1 23 0 7 1510 796 157 7 0 chrX 121362799 121362939 -45287357 + B1_Mus1 SINE Alu 2 142 -6 7 1510 215 31 0 30 chrX 121362947 121362980 -45287316 + (CAAA)n Simple_repeat Simple_repeat 3 34 0 7 1510 510 17 0 0 chrX 121363109 121363168 -45287128 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 7 1510 299 121 0 17 chrX 121363247 121363306 -45286990 + (TG)n Simple_repeat Simple_repeat 1 58 0 7 1510 785 173 7 7 chrX 121363367 121363507 -45286789 + B1_Mus1 SINE Alu 3 142 -6 7 1510 366 183 0 0 chrX 121363510 121363581 -45286715 + GA-rich Low_complexity Low_complexity 2 72 0 7 1510 471 35 0 0 chrX 121363658 121363715 -45286581 + (GGAA)n Simple_repeat Simple_repeat 3 59 0 7 1510 543 78 0 0 chrX 121363913 121363990 -45286306 + (TA)n Simple_repeat Simple_repeat 2 78 0 7 1510 214 171 0 0 chrX 121364016 121364057 -45286239 + T-rich Low_complexity Low_complexity 2 42 0 7 1510 740 148 14 7 chrX 121364104 121364247 -45286049 + B1_Mus1 SINE Alu 4 147 -1 7 1510 363 167 0 0 chrX 121364248 121364314 -45285982 + GA-rich Low_complexity Low_complexity 2 67 0 7 1510 855 144 7 14 chrX 121364589 121364737 -45285559 + B1_Mus1 SINE Alu 2 148 0 7 1510 288 91 0 0 chrX 121364737 121364781 -45285515 + (A)n Simple_repeat Simple_repeat 1 44 0 7 1510 333 281 81 66 chrX 121364803 121365093 -45285203 - L1MDa LINE L1 -4115 2518 2380 7 1510 301 209 68 60 chrX 121365140 121365191 -45285105 - L1MDa LINE L1 -4137 2496 2444 7 1510 961 129 0 7 chrX 121365191 121365339 -45284957 - B1_Mus2 SINE Alu 0 147 1 7 1510 301 209 68 60 chrX 121365339 121365351 -45284945 - L1MDa LINE L1 -4190 2443 2430 7 1510 264 30 0 0 chrX 121365351 121365384 -45284912 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1510 301 209 68 60 chrX 121365384 121365436 -45284860 - L1MDa LINE L1 -4204 2429 2380 7 1510 753 192 7 0 chrX 121365445 121365591 -45284705 + B1_Mus1 SINE Alu 2 148 0 7 1510 261 0 0 0 chrX 121365756 121365785 -45284511 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 7 1510 873 142 0 0 chrX 121365953 121366087 -45284209 + B1_Mus1 SINE Alu 2 135 -13 7 1510 533 52 13 0 chrX 121366104 121366181 -45284115 + (GAAA)n Simple_repeat Simple_repeat 2 79 0 7 1510 180 97 0 0 chrX 121366212 121366243 -45284053 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 7 1510 834 150 7 0 chrX 121366529 121366669 -45283627 + B1_Mus1 SINE Alu 2 142 -6 7 1510 184 30 29 29 chrX 121366671 121366705 -45283591 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 7 1510 207 0 0 0 chrX 121366942 121366965 -45283331 + (GGAA)n Simple_repeat Simple_repeat 1 23 0 8 1510 450 0 0 0 chrX 121367164 121367214 -45283082 + (TA)n Simple_repeat Simple_repeat 2 51 0 8 1510 201 159 0 0 chrX 121367249 121367293 -45283003 + T-rich Low_complexity Low_complexity 2 45 0 8 1510 820 144 14 0 chrX 121367336 121367475 -45282821 + B1_Mus1 SINE Alu 2 142 -6 8 1510 717 97 0 0 chrX 121367482 121367585 -45282711 + (GGAA)n Simple_repeat Simple_repeat 3 105 0 8 1510 855 144 7 14 chrX 121367861 121368009 -45282287 + B1_Mus1 SINE Alu 2 148 0 8 1510 237 119 0 0 chrX 121368009 121368051 -45282245 + (A)n Simple_repeat Simple_repeat 1 42 0 8 1510 31 44 0 0 chrX 121368081 121368126 -45282170 + AT_rich Low_complexity Low_complexity 1 45 0 8 1510 221 106 34 108 chrX 121368200 121368348 -45281948 + T-rich Low_complexity Low_complexity 2 138 0 8 1510 243 79 0 0 chrX 121368312 121368350 -45281946 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 8 1510 832 125 20 14 chrX 121368392 121368538 -45281758 + B1_Mus1 SINE Alu 2 148 0 8 1510 261 83 0 0 chrX 121368549 121368585 -45281711 + (A)n Simple_repeat Simple_repeat 1 36 0 8 1510 35 24 0 0 chrX 121368615 121368657 -45281639 + AT_rich Low_complexity Low_complexity 1 42 0 8 1510 207 0 0 0 chrX 121368742 121368765 -45281531 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 8 1510 276 53 0 0 chrX 121368854 121368892 -45281404 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 8 1510 798 132 20 27 chrX 121368934 121369082 -45281214 + B1_Mus1 SINE Alu 2 148 0 8 1510 24 0 0 0 chrX 121369147 121369171 -45281125 + AT_rich Low_complexity Low_complexity 1 24 0 8 1510 198 0 0 0 chrX 121369198 121369220 -45281076 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1510 190 65 14 114 chrX 121369288 121369358 -45280938 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 8 1510 978 130 0 0 chrX 121369367 121369513 -45280783 - B1_Mus2 SINE Alu 0 147 2 8 1510 279 54 0 0 chrX 121369518 121369555 -45280741 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 1510 27 29 0 0 chrX 121369560 121369594 -45280702 + AT_rich Low_complexity Low_complexity 1 34 0 8 1510 818 158 7 7 chrX 121369617 121369757 -45280539 + B1_Mus1 SINE Alu 3 142 -6 8 1510 533 115 11 0 chrX 121369762 121369849 -45280447 + (GAAA)n Simple_repeat Simple_repeat 2 89 0 8 1510 399 41 0 0 chrX 121369923 121369972 -45280324 + (GGAA)n Simple_repeat Simple_repeat 3 51 0 8 1510 24 0 0 0 chrX 121370056 121370080 -45280216 + AT_rich Low_complexity Low_complexity 1 24 0 8 1510 753 192 7 0 chrX 121370114 121370260 -45280036 + B1_Mus1 SINE Alu 2 148 0 8 1510 261 0 0 0 chrX 121370424 121370453 -45279843 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 8 1510 873 142 0 0 chrX 121370621 121370755 -45279541 + B1_Mus1 SINE Alu 2 135 -13 8 1510 668 12 12 0 chrX 121370772 121370853 -45279443 + (GAAA)n Simple_repeat Simple_repeat 2 83 0 8 1510 195 114 0 0 chrX 121370900 121370935 -45279361 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 8 1510 798 147 14 0 chrX 121370990 121371133 -45279163 + B1_Mus1 SINE Alu 4 148 0 8 1510 282 160 0 0 chrX 121371133 121371183 -45279113 + GA-rich Low_complexity Low_complexity 2 51 0 8 1510 905 132 14 0 chrX 121371452 121371596 -45278700 + B1_Mus1 SINE Alu 2 147 -1 8 1510 225 119 0 0 chrX 121371597 121371639 -45278657 + (A)n Simple_repeat Simple_repeat 1 42 0 8 1510 221 91 0 102 chrX 121371671 121371720 -45278576 + T-rich Low_complexity Low_complexity 1 44 0 8 1510 261 0 0 0 chrX 121371797 121371826 -45278470 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 8 1510 309 153 0 0 chrX 121371881 121371953 -45278343 + T-rich Low_complexity Low_complexity 1 72 0 8 1510 838 125 20 27 chrX 121371995 121372143 -45278153 + B1_Mus1 SINE Alu 2 148 0 8 1510 207 0 0 0 chrX 121372256 121372279 -45278017 + (T)n Simple_repeat Simple_repeat 1 23 0 8 188 282 160 0 0 chrX 121372631 121372681 -45277615 + CT-rich Low_complexity Low_complexity 2 51 0 8 1511 798 147 14 0 chrX 121372681 121372824 -45277472 - B1_Mus1 SINE Alu 0 148 4 8 1511 243 0 0 0 chrX 121372842 121372869 -45277427 + (GGAA)n Simple_repeat Simple_repeat 3 29 0 8 1511 24 32 0 0 chrX 121373091 121373122 -45277174 + AT_rich Low_complexity Low_complexity 1 31 0 8 1511 911 143 0 13 chrX 121373144 121373293 -45277003 + B1_Mus1 SINE Alu 2 148 0 8 1511 229 65 0 0 chrX 121373424 121373455 -45276841 + (T)n Simple_repeat Simple_repeat 1 31 0 8 1511 253 62 42 0 chrX 121373485 121373533 -45276763 + (TTTG)n Simple_repeat Simple_repeat 1 50 0 8 1511 22 0 0 0 chrX 121373535 121373557 -45276739 + AT_rich Low_complexity Low_complexity 1 22 0 8 1511 753 192 7 0 chrX 121373591 121373737 -45276559 + B1_Mus1 SINE Alu 2 148 0 8 1511 261 0 0 0 chrX 121373901 121373930 -45276366 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 8 1511 873 142 0 0 chrX 121374098 121374232 -45276064 + B1_Mus1 SINE Alu 2 135 -13 8 1511 668 12 12 0 chrX 121374249 121374330 -45275966 + (GAAA)n Simple_repeat Simple_repeat 2 83 0 8 1511 180 97 0 0 chrX 121374361 121374392 -45275904 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 8 1511 834 150 7 0 chrX 121374678 121374818 -45275478 + B1_Mus1 SINE Alu 2 142 -6 8 1511 184 30 29 29 chrX 121374820 121374854 -45275442 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 8 1511 299 65 0 21 chrX 121375095 121375142 -45275154 + (TG)n Simple_repeat Simple_repeat 2 47 0 8 1511 773 187 7 0 chrX 121375207 121375346 -45274950 + B1_Mus2 SINE Alu 2 141 -6 8 1511 626 140 9 0 chrX 121375351 121375465 -45274831 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 8 1511 432 0 0 0 chrX 121375657 121375705 -45274591 + (TA)n Simple_repeat Simple_repeat 2 49 0 8 1511 192 163 0 0 chrX 121375740 121375783 -45274513 + T-rich Low_complexity Low_complexity 3 45 0 8 1511 809 151 14 0 chrX 121375826 121375965 -45274331 + B1_Mus1 SINE Alu 2 142 -6 8 1511 690 117 0 0 chrX 121375972 121376083 -45274213 + (GGAA)n Simple_repeat Simple_repeat 3 113 0 8 1511 189 0 0 0 chrX 121376282 121376303 -45273993 + (TG)n Simple_repeat Simple_repeat 2 22 0 8 1511 841 151 7 14 chrX 121376362 121376510 -45273786 + B1_Mus1 SINE Alu 2 148 0 8 1511 222 37 0 0 chrX 121376521 121376548 -45273748 + (A)n Simple_repeat Simple_repeat 1 27 0 8 1511 198 0 0 0 chrX 121376697 121376719 -45273577 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 8 1511 201 238 0 0 chrX 121376740 121376803 -45273493 + T-rich Low_complexity Low_complexity 1 63 0 8 1511 252 59 0 0 chrX 121376809 121376843 -45273453 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1511 798 132 20 27 chrX 121376888 121377036 -45273260 + B1_Mus1 SINE Alu 2 148 0 8 1511 234 0 0 0 chrX 121377151 121377177 -45273119 + (T)n Simple_repeat Simple_repeat 1 26 0 8 1511 397 167 0 0 chrX 121377177 121377249 -45273047 - B1_Mus2 SINE Alu -75 72 1 8 1511 329 259 23 12 chrX 121377184 121377261 -45273035 - B4 SINE B4 -142 150 72 8 1511 264 30 0 0 chrX 121377261 121377294 -45273002 + (TG)n Simple_repeat Simple_repeat 2 34 0 8 1511 753 192 7 0 chrX 121377355 121377501 -45272795 + B1_Mus1 SINE Alu 2 148 0 8 1511 261 0 0 0 chrX 121377665 121377694 -45272602 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 8 1511 873 142 0 0 chrX 121377862 121377996 -45272300 + B1_Mus1 SINE Alu 2 135 -13 8 1511 641 45 11 0 chrX 121378013 121378102 -45272194 + (GAAA)n Simple_repeat Simple_repeat 2 91 0 8 1511 180 97 0 0 chrX 121378133 121378164 -45272132 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 8 1511 834 150 7 0 chrX 121378450 121378590 -45271706 + B1_Mus1 SINE Alu 2 142 -6 8 1511 184 30 29 29 chrX 121378592 121378626 -45271670 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 8 1511 213 204 0 0 chrX 121378815 121378864 -45271432 + T-rich Low_complexity Low_complexity 6 54 0 8 1511 299 65 0 21 chrX 121378866 121378913 -45271383 + (TG)n Simple_repeat Simple_repeat 2 47 0 8 1511 773 187 7 0 chrX 121378978 121379117 -45271179 + B1_Mus2 SINE Alu 2 141 -6 8 1511 626 140 9 0 chrX 121379122 121379236 -45271060 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 8 1511 486 0 0 0 chrX 121379428 121379482 -45270814 + (TA)n Simple_repeat Simple_repeat 2 55 0 8 1511 192 163 0 0 chrX 121379517 121379560 -45270736 + T-rich Low_complexity Low_complexity 3 45 0 8 1511 809 151 14 0 chrX 121379603 121379742 -45270554 + B1_Mus1 SINE Alu 2 142 -6 8 1511 768 99 0 0 chrX 121379749 121379860 -45270436 + (GGAA)n Simple_repeat Simple_repeat 3 113 0 8 1511 189 0 0 0 chrX 121380059 121380080 -45270216 + (TG)n Simple_repeat Simple_repeat 2 22 0 8 1511 841 151 7 14 chrX 121380139 121380287 -45270009 + B1_Mus1 SINE Alu 2 148 0 8 1511 216 67 0 0 chrX 121380298 121380328 -45269968 + (A)n Simple_repeat Simple_repeat 1 30 0 8 1511 198 0 0 0 chrX 121380477 121380499 -45269797 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 8 1511 207 246 0 0 chrX 121380518 121380583 -45269713 + T-rich Low_complexity Low_complexity 4 68 0 8 1511 318 26 0 0 chrX 121380589 121380628 -45269668 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 8 1511 753 152 22 0 chrX 121380673 121380811 -45269485 + B1_Mus1 SINE Alu 2 142 -6 8 1511 198 0 0 0 chrX 121380894 121380916 -45269380 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1511 225 0 0 0 chrX 121380945 121380970 -45269326 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1511 22 70 0 0 chrX 121380982 121381025 -45269271 + AT_rich Low_complexity Low_complexity 1 43 0 8 1511 247 42 0 78 chrX 121381041 121381092 -45269204 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 8 1511 1008 116 0 7 chrX 121381118 121381266 -45269030 - B1_Mus2 SINE Alu 0 147 1 8 1511 237 65 0 0 chrX 121381278 121381309 -45268987 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 1511 22 0 0 0 chrX 121381314 121381336 -45268960 + AT_rich Low_complexity Low_complexity 1 22 0 9 1511 806 159 14 0 chrX 121381370 121381515 -45268781 + B1_Mus1 SINE Alu 2 148 0 9 1511 204 40 0 0 chrX 121381679 121381704 -45268592 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 9 1511 590 123 11 1 chrX 121381736 121381840 -45268456 - B1_Mus2 SINE Alu -3 114 1 9 1511 364 259 73 9 chrX 121381752 121381852 -45268444 - B4 SINE B4 -113 179 72 9 1511 255 61 0 0 chrX 121381852 121381885 -45268411 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1511 806 159 14 0 chrX 121381946 121382091 -45268205 + B1_Mus1 SINE Alu 2 148 0 9 1511 207 69 0 0 chrX 121382252 121382281 -45268015 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 9 1511 873 142 0 0 chrX 121382449 121382583 -45267713 + B1_Mus1 SINE Alu 2 135 -13 9 1511 488 16 16 0 chrX 121382600 121382661 -45267635 + (GAAA)n Simple_repeat Simple_repeat 2 63 0 9 1511 180 97 0 0 chrX 121382692 121382723 -45267573 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 9 1511 21 0 0 0 chrX 121382958 121382979 -45267317 + AT_rich Low_complexity Low_complexity 1 21 0 9 1511 822 157 7 0 chrX 121383013 121383153 -45267143 + B1_Mus1 SINE Alu 2 142 -6 9 1511 184 30 29 29 chrX 121383155 121383189 -45267107 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 9 1511 210 263 0 76 chrX 121383285 121383429 -45266867 + T-rich Low_complexity Low_complexity 6 138 0 9 1511 299 65 0 21 chrX 121383431 121383478 -45266818 + (TG)n Simple_repeat Simple_repeat 2 47 0 9 1511 773 187 7 0 chrX 121383543 121383682 -45266614 + B1_Mus2 SINE Alu 2 141 -6 9 1511 680 123 9 0 chrX 121383687 121383801 -45266495 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 9 1511 180 0 0 0 chrX 121383993 121384013 -45266283 + (TA)n Simple_repeat Simple_repeat 2 21 0 9 1511 180 158 0 0 chrX 121384048 121384086 -45266210 + T-rich Low_complexity Low_complexity 2 39 0 9 1511 820 144 14 0 chrX 121384132 121384271 -45266025 + B1_Mus1 SINE Alu 2 142 -6 9 1511 609 136 0 0 chrX 121384283 121384386 -45265910 + (GGAA)n Simple_repeat Simple_repeat 3 105 0 9 1511 828 158 7 14 chrX 121384658 121384806 -45265490 + B1_Mus1 SINE Alu 2 148 0 9 1511 312 27 0 0 chrX 121384817 121384854 -45265442 + (A)n Simple_repeat Simple_repeat 1 37 0 9 1511 198 0 0 0 chrX 121385002 121385024 -45265272 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 9 1511 306 50 0 0 chrX 121385112 121385152 -45265144 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 9 1511 783 132 20 27 chrX 121385197 121385345 -45264951 + B1_Mus1 SINE Alu 2 148 0 9 1511 261 0 0 0 chrX 121385462 121385491 -45264805 + (T)n Simple_repeat Simple_repeat 1 29 0 9 1511 22 70 0 0 chrX 121385503 121385546 -45264750 + AT_rich Low_complexity Low_complexity 1 43 0 9 1511 247 42 0 78 chrX 121385562 121385613 -45264683 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 9 1511 992 116 0 7 chrX 121385639 121385787 -45264509 - B1_Mus2 SINE Alu 0 147 1 9 1511 255 61 0 0 chrX 121385799 121385832 -45264464 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1511 22 0 0 0 chrX 121385837 121385859 -45264437 + AT_rich Low_complexity Low_complexity 1 22 0 9 1511 806 159 14 0 chrX 121385893 121386038 -45264258 + B1_Mus1 SINE Alu 2 148 0 9 1511 204 40 0 0 chrX 121386201 121386226 -45264070 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 9 1511 849 149 0 0 chrX 121386394 121386528 -45263768 + B1_Mus1 SINE Alu 2 135 -13 9 1511 907 64 14 0 chrX 121386547 121386687 -45263609 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 9 1511 180 97 0 0 chrX 121386718 121386749 -45263547 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 9 1511 815 157 7 0 chrX 121387028 121387168 -45263128 + B1_Mus1 SINE Alu 2 142 -6 9 1511 184 30 29 29 chrX 121387170 121387204 -45263092 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 9 1511 317 62 0 20 chrX 121387442 121387491 -45262805 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 1511 781 187 7 0 chrX 121387556 121387695 -45262601 + B1_Mus2 SINE Alu 2 141 -6 9 1511 590 122 10 0 chrX 121387700 121387798 -45262498 + (GAAA)n Simple_repeat Simple_repeat 2 100 0 9 1511 432 0 0 0 chrX 121387989 121388037 -45262259 + (TA)n Simple_repeat Simple_repeat 2 49 0 9 1511 192 125 0 0 chrX 121388070 121388102 -45262194 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 9 1511 843 138 14 0 chrX 121388153 121388291 -45262005 + B1_Mus1 SINE Alu 2 141 -7 9 1511 618 99 0 0 chrX 121388316 121388407 -45261889 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 9 1511 189 0 0 0 chrX 121388606 121388627 -45261669 + (TG)n Simple_repeat Simple_repeat 2 22 0 9 1511 919 130 7 14 chrX 121388686 121388834 -45261462 + B1_Mus1 SINE Alu 2 148 0 9 1511 240 122 0 0 chrX 121388834 121388875 -45261421 + (A)n Simple_repeat Simple_repeat 1 41 0 9 1511 33 43 0 0 chrX 121388905 121388952 -45261344 + AT_rich Low_complexity Low_complexity 1 47 0 9 1511 261 114 0 141 chrX 121389017 121389180 -45261116 + T-rich Low_complexity Low_complexity 1 140 0 9 1511 894 104 20 27 chrX 121389222 121389370 -45260926 + B1_Mus1 SINE Alu 2 148 0 9 1511 279 0 0 0 chrX 121389443 121389474 -45260822 + (T)n Simple_repeat Simple_repeat 1 31 0 9 1511 189 0 0 0 chrX 121389504 121389525 -45260771 + (T)n Simple_repeat Simple_repeat 1 21 0 9 1511 254 64 0 60 chrX 121389591 121389641 -45260655 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 9 1511 1002 123 0 7 chrX 121389667 121389814 -45260482 - B1_Mus2 SINE Alu 0 147 2 9 1511 186 43 0 0 chrX 121389825 121389848 -45260448 + (TG)n Simple_repeat Simple_repeat 2 24 0 9 1511 22 0 0 0 chrX 121389853 121389875 -45260421 + AT_rich Low_complexity Low_complexity 1 22 0 9 1511 793 159 14 0 chrX 121389909 121390047 -45260249 + B1_Mus1 SINE Alu 2 141 -7 9 1511 189 0 0 0 chrX 121390217 121390238 -45260058 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 9 1511 914 142 0 0 chrX 121390406 121390540 -45259756 + B1_Mus1 SINE Alu 2 135 -13 9 1511 830 54 9 0 chrX 121390554 121390666 -45259630 + (GAAA)n Simple_repeat Simple_repeat 3 115 0 9 1511 180 97 0 0 chrX 121390697 121390728 -45259568 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 9 1511 855 150 7 0 chrX 121391010 121391150 -45259146 + B1_Mus1 SINE Alu 2 142 -6 9 1511 184 30 29 29 chrX 121391152 121391186 -45259110 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 9 1511 299 65 0 21 chrX 121391427 121391474 -45258822 + (TG)n Simple_repeat Simple_repeat 2 47 0 9 1511 858 157 7 0 chrX 121391539 121391679 -45258617 + B1_Mus1 SINE Alu 2 142 -6 9 1511 474 120 0 0 chrX 121391685 121391760 -45258536 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 9 1511 198 0 0 0 chrX 121391962 121391984 -45258312 + (TA)n Simple_repeat Simple_repeat 2 23 0 9 1511 234 136 0 0 chrX 121392017 121392061 -45258235 + (TTTTTG)n Simple_repeat Simple_repeat 2 45 0 9 1511 829 144 14 0 chrX 121392103 121392242 -45258054 + B1_Mus1 SINE Alu 2 142 -6 9 1511 789 110 0 0 chrX 121392250 121392368 -45257928 + (GGAA)n Simple_repeat Simple_repeat 4 121 0 9 1511 189 0 0 0 chrX 121392566 121392587 -45257709 + (TG)n Simple_repeat Simple_repeat 2 22 0 9 1511 24 32 0 0 chrX 121392596 121392627 -45257669 + AT_rich Low_complexity Low_complexity 1 31 0 9 1511 983 129 0 13 chrX 121392649 121392798 -45257498 + B1_Mus1 SINE Alu 2 148 0 9 1511 210 37 0 0 chrX 121392810 121392837 -45257459 + (A)n Simple_repeat Simple_repeat 1 27 0 9 1511 216 0 0 0 chrX 121392932 121392956 -45257340 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1511 195 42 0 0 chrX 121392989 121393013 -45257283 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1511 281 127 0 53 chrX 121393039 121393114 -45257182 + T-rich Low_complexity Low_complexity 1 71 0 9 1511 922 119 14 7 chrX 121393156 121393300 -45256996 + B1_Mus1 SINE Alu 2 146 -2 9 1511 180 27 0 75 chrX 121393300 121393340 -45256956 + (CAAAA)n Simple_repeat Simple_repeat 1 37 0 9 1511 201 39 0 0 chrX 121393410 121393436 -45256860 + (T)n Simple_repeat Simple_repeat 1 26 0 9 1511 534 16 0 0 chrX 121393493 121393556 -45256740 + (TTTTG)n Simple_repeat Simple_repeat 3 65 0 9 1511 587 88 0 0 chrX 121393602 121393682 -45256614 - B1_Mm SINE Alu 0 147 68 9 1511 2359 100 171 87 chrX 121393678 121394217 -45256079 - RLTR6_Mm LTR ERV1 -70 584 1 9 1511 9316 34 32 7 chrX 121394217 121396424 -45253872 - MMVL30-int LTR ERV1 0 3698 1437 9 1511 577 114 61 202 chrX 121396434 121396632 -45253664 - MMVL30-int LTR ERV1 -2170 1129 960 9 1511 5528 40 3 4 chrX 121396637 121397334 -45252962 - MMVL30-int LTR ERV1 -2231 1467 772 9 1511 262 96 19 0 chrX 121397682 121397734 -45252562 - MMVL30-int LTR ERV1 -2922 377 325 9 1511 4167 49 12 12 chrX 121397814 121398548 -45251748 - RLTR6-int LTR ERV1 -7007 771 1 9 1511 2537 98 164 84 chrX 121398548 121399108 -45251188 - RLTR6_Mm LTR ERV1 -49 605 1 9 1511 498 122 0 0 chrX 121399108 121399182 -45251114 - B1_Mus2 SINE Alu -72 75 2 9 1511 365 250 0 0 chrX 121399116 121399192 -45251104 - B4 SINE B4 -140 152 77 9 1511 3578 99 8 76 chrX 121399192 121399817 -45250479 + RLTR6_Mm LTR ERV1 1 584 -70 9 1511 411 21 0 0 chrX 121399817 121399865 -45250431 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 1511 22 0 0 0 chrX 121399872 121399894 -45250402 + AT_rich Low_complexity Low_complexity 1 22 0 9 1511 743 194 7 0 chrX 121399928 121400067 -45250229 + B1_Mus1 SINE Alu 2 141 -7 9 1511 273 140 0 0 chrX 121400071 121400128 -45250168 + (A)n Simple_repeat Simple_repeat 1 57 0 9 1511 30 27 0 0 chrX 121400158 121400195 -45250101 + AT_rich Low_complexity Low_complexity 1 37 0 9 1511 28 0 0 0 chrX 121400248 121400276 -45250020 + AT_rich Low_complexity Low_complexity 1 28 0 9 1511 220 106 0 96 chrX 121400305 121400378 -45249918 + T-rich Low_complexity Low_complexity 1 66 0 9 1511 927 110 13 27 chrX 121400424 121400573 -45249723 + B1_Mus1 SINE Alu 2 148 0 9 1511 243 0 0 0 chrX 121400782 121400809 -45249487 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 1511 1057 110 7 0 chrX 121400959 121401104 -45249192 - B1_Mus2 SINE Alu 0 147 2 9 1511 666 167 114 0 chrX 121401136 121401268 -45249028 + B1_Mus1 SINE Alu 2 148 0 1 1511 426 151 0 0 chrX 121401269 121401342 -45248954 + A-rich Low_complexity Low_complexity 1 73 0 1 1511 228 127 291 0 chrX 121401342 121401397 -45248899 + B1_Mus2 SINE Alu 77 147 0 1 1511 762 181 0 0 chrX 121401399 121401548 -45248748 + A-rich Low_complexity Low_complexity 1 149 0 1 1511 24 32 0 0 chrX 121401676 121401707 -45248589 + AT_rich Low_complexity Low_complexity 1 31 0 1 1511 205 237 0 38 chrX 121401756 121401835 -45248461 + T-rich Low_complexity Low_complexity 2 77 0 1 1511 942 141 0 0 chrX 121401978 121402120 -45248176 + B1_Mus2 SINE Alu 2 143 -4 1 1511 186 43 0 0 chrX 121402123 121402146 -45248150 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 1 1511 195 69 0 0 chrX 121402146 121402174 -45248122 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 1511 597 259 60 47 chrX 121402543 121402758 -45247538 + RLTR45 LTR ERVK 265 482 0 1 1511 1327 264 44 22 chrX 121402760 121403210 -45247086 + RLTR45-int LTR ERVK 3 462 -6782 1 1511 182 337 85 21 chrX 121403210 121403304 -45246992 + L2 LINE L2 2815 2914 -505 1 1511 588 203 0 0 chrX 121404189 121404312 -45245984 + RLTR45-int LTR ERVK 569 691 -6553 1 1511 433 312 10 81 chrX 121404674 121404883 -45245413 + RLTR45-int LTR ERVK 693 886 -6358 1 1511 1563 332 42 37 chrX 121405493 121406822 -45243474 + RNERVK23-int LTR ERVK 2378 3597 -2570 1 1511 1793 309 36 39 chrX 121407344 121408447 -45241849 + RNERVK23-int LTR ERVK 4608 5707 -2510 1 1511 927 126 28 0 chrX 121408999 121409142 -45241154 + B1_Mus1 SINE Alu 2 148 0 1 1511 204 97 0 0 chrX 121409143 121409174 -45241122 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1511 25 65 0 0 chrX 121409471 121409517 -45240779 + AT_rich Low_complexity Low_complexity 1 46 0 1 1511 372 22 0 0 chrX 121409739 121409784 -45240512 + (TAA)n Simple_repeat Simple_repeat 3 47 0 1 1511 32 0 0 0 chrX 121410305 121410337 -45239959 + AT_rich Low_complexity Low_complexity 1 32 0 1 1511 26 74 0 0 chrX 121410736 121410790 -45239506 + AT_rich Low_complexity Low_complexity 1 54 0 1 1511 501 32 0 0 chrX 121411191 121411254 -45239042 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1511 349 324 9 0 chrX 121411344 121411455 -45238841 + ID_B1 SINE B4 110 221 -3 1 1511 284 305 61 30 chrX 121411622 121411754 -45238542 - B3 SINE B2 0 216 81 1 1511 200 100 25 0 chrX 121412040 121412080 -45238216 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1 1511 980 121 7 0 chrX 121412081 121412221 -45238075 - B1_Mm SINE Alu -6 141 1 1 1511 257 372 64 0 chrX 121412603 121412681 -45237615 + ID4_ SINE ID 1 83 0 1 1511 26 30 0 0 chrX 121412689 121412722 -45237574 + AT_rich Low_complexity Low_complexity 1 33 0 1 1511 1657 263 94 19 chrX 121412726 121413602 -45236694 - Lx6 LINE L1 0 7696 6722 1 1511 233 236 0 18 chrX 121414061 121414117 -45236179 - RLTR28B LTR ERVL -10 514 460 1 1511 641 217 98 12 chrX 121414284 121414447 -45235849 - RLTR28B LTR ERVL -304 177 1 1 1511 240 347 10 10 chrX 121414454 121414550 -45235746 + Lx7 LINE L1 7106 7201 -495 1 1511 1057 92 0 0 chrX 121415163 121415305 -45234991 + B1_Mus1 SINE Alu 2 143 -5 1 1511 15228 91 10 20 chrX 121415317 121418332 -45231964 + L1Md_Gf LINE L1 220 3359 -2527 1 1511 6261 1 0 0 chrX 121418332 121419019 -45231277 + L1Md_A LINE L1 5896 6582 0 1 1511 22 0 0 0 chrX 121419116 121419138 -45231158 + AT_rich Low_complexity Low_complexity 1 22 0 1 1511 7257 137 33 0 chrX 121419146 121420450 -45229846 + L1_Mm LINE L1 1704 3050 -2833 1 1511 4724 86 6 10 chrX 121420445 121420692 -45229604 - L1_Mus2 LINE L1 -297 6269 6028 1 1511 7543 57 6 5 chrX 121420692 121421649 -45228647 - RLTR13A2 LTR ERVK 0 958 1 1 1511 7563 117 5 7 chrX 121421649 121423023 -45227273 - L1_Mus2 LINE L1 -539 6027 4652 1 1511 281 309 123 28 chrX 121423152 121423478 -45226818 + Charlie2a DNA MER1_type 1858 2214 -647 1 1511 498 168 0 0 chrX 121423559 121423646 -45226650 + T-rich Low_complexity Low_complexity 15 101 0 1 1511 1100 88 0 7 chrX 121423646 121423794 -45226502 - B1_Mus2 SINE Alu 0 147 1 1 1511 498 168 0 0 chrX 121423794 121423807 -45226489 + T-rich Low_complexity Low_complexity 2 14 0 1 1511 320 313 90 33 chrX 121423927 121424037 -45226259 + Charlie2a DNA MER1_type 2476 2591 -270 1 1511 4176 114 126 3 chrX 121424037 121424729 -45225567 - L1_Mus3 LINE L1 -4 6634 5858 1 1511 320 313 90 33 chrX 121424729 121424952 -45225344 + Charlie2a DNA MER1_type 2592 2828 -33 1 1511 627 325 12 0 chrX 121424957 121425117 -45225179 + B3 SINE B2 5 166 -50 1 1511 485 71 0 14 chrX 121425117 121425188 -45225108 + (CA)n Simple_repeat Simple_repeat 1 70 0 1 1511 30133 92 3 18 chrX 121425273 121430623 -45219673 + L1Md_F2 LINE L1 319 5585 -298 1 1511 8047 50 1 4 chrX 121430624 121431623 -45218673 + L1Md_F2 LINE L1 5587 6582 0 1 1511 2221 72 0 0 chrX 121431623 121431916 -45218380 + L1Md_F2 LINE L1 5294 5586 -297 1 1511 6863 102 7 12 chrX 121431916 121432916 -45217380 + L1Md_F2 LINE L1 5587 6581 -1 1 1511 2114 191 10 2 chrX 121432919 121433384 -45216912 - L1_Mur1 LINE L1 -587 5591 5104 1 1511 2334 197 50 16 chrX 121433375 121433876 -45216420 + Lx2B LINE L1 6477 6994 -6 1 1511 453 351 91 66 chrX 121433978 121434018 -45216278 - MT2A LTR ERVL 0 601 557 1 1511 528 16 0 0 chrX 121434018 121434079 -45216217 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 1511 895 292 93 30 chrX 121434079 121434472 -45215824 - MT2A LTR ERVL -45 556 2 1 1511 273 333 0 0 chrX 121434796 121434877 -45215419 + ORR1D2 LTR MaLR 6 86 -284 1 1511 2275 46 0 3 chrX 121434959 121435245 -45215051 + L1Md_F2 LINE L1 6298 6582 0 1 1511 4807 113 8 5 chrX 121435256 121436006 -45214290 + L1_Mm LINE L1 4952 5703 -180 1 1511 2463 135 28 28 chrX 121436002 121436325 -45213971 - Lx3_Mus LINE L1 -769 6240 5913 1 1511 216 0 0 0 chrX 121436325 121436349 -45213947 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1511 2463 135 28 28 chrX 121436349 121436483 -45213813 - Lx3_Mus LINE L1 -1097 5912 5783 1 1511 671 305 58 55 chrX 121437287 121437631 -45212665 - RLTR6-int LTR ERV1 -138 7640 7115 1 1511 615 126 19 0 chrX 121439127 121439230 -45211066 - RMER17D2 LTR ERVK -2 807 703 1 1511 1091 142 29 49 chrX 121439230 121439474 -45210822 - Lx3C LINE L1 -849 6127 5889 1 1511 1079 267 21 21 chrX 121439693 121439972 -45210324 - ORR1B1 LTR MaLR 0 394 116 1 1511 2550 263 58 28 chrX 121439975 121440961 -45209335 + RMER1B Other Other 106 1062 -4 1 1511 282 106 0 0 chrX 121441230 121441277 -45209019 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1511 425 241 113 16 chrX 121441884 121442078 -45208218 - L1MD3 LINE L1 -10 7985 7773 1 1511 926 243 146 52 chrX 121442143 121442207 -45208089 - ORR1D2 LTR MaLR 0 394 305 1 1511 188 34 0 33 chrX 121442207 121442237 -45208059 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 1 1511 926 244 147 55 chrX 121442237 121442521 -45207775 - ORR1D2 LTR MaLR -79 315 24 1 1511 777 98 0 0 chrX 121442617 121442729 -45207567 + (TTCC)n Simple_repeat Simple_repeat 2 113 0 1 1511 524 309 37 0 chrX 121442845 121442981 -45207315 + RSINE1 SINE B4 3 143 -22 1 1511 468 99 0 0 chrX 121443005 121443076 -45207220 + (CA)n Simple_repeat Simple_repeat 1 71 0 1 1511 226 50 50 0 chrX 121443076 121443116 -45207180 + (CCA)n Simple_repeat Simple_repeat 3 44 0 1 1511 259 193 12 12 chrX 121443136 121443220 -45207076 + GA-rich Low_complexity Low_complexity 1 84 0 1 1511 1716 192 3 8 chrX 121443252 121443635 -45206661 - Lx2 LINE L1 -713 6284 5904 1 1511 804 175 0 0 chrX 121443635 121443789 -45206507 + Lx2 LINE L1 6844 6997 0 1 1511 1156 254 57 83 chrX 121443804 121444191 -45206105 + ORR1C2 LTR MaLR 8 384 0 1 1511 197 108 0 26 chrX 121445013 121445051 -45205245 + (CATA)n Simple_repeat Simple_repeat 4 40 0 1 1511 195 42 0 0 chrX 121445246 121445270 -45205026 + (TTC)n Simple_repeat Simple_repeat 2 25 0 1 1511 685 78 0 0 chrX 121445270 121445360 -45204936 - B1_Mm SINE Alu -56 91 2 1 1511 444 317 16 24 chrX 121445593 121445716 -45204580 + B3 SINE B2 2 123 -93 1 1511 781 171 26 7 chrX 121445739 121445892 -45204404 + Lx2B LINE L1 6156 6311 -689 1 1511 1571 246 61 26 chrX 121445884 121446340 -45203956 + Lx2B LINE L1 6524 6995 -5 1 1511 22 0 0 0 chrX 121446962 121446984 -45203312 + AT_rich Low_complexity Low_complexity 1 22 0 1 1511 252 111 0 0 chrX 121447376 121447421 -45202875 + (TTG)n Simple_repeat Simple_repeat 2 46 0 1 1511 329 239 0 32 chrX 121447426 121447521 -45202775 + RNLTR23 LTR ERVK 551 642 0 1 1511 586 318 98 20 chrX 121448438 121448682 -45201614 + Lx7 LINE L1 7036 7298 -398 1 1511 372 43 0 0 chrX 121448721 121448767 -45201529 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 1511 391 48 32 0 chrX 121448767 121448828 -45201468 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 1511 246 128 0 0 chrX 121448895 121448934 -45201362 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 1511 2814 67 53 3 chrX 121449351 121449728 -45200568 - MTA_Mm LTR MaLR 0 396 1 1 1511 439 244 34 75 chrX 121450580 121450726 -45199570 + Lx9 LINE L1 6962 7101 -543 1 1511 361 320 74 10 chrX 121450776 121450978 -45199318 + Lx9 LINE L1 7225 7439 -205 1 1511 432 0 0 0 chrX 121450995 121451043 -45199253 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1511 30 27 0 0 chrX 121451141 121451178 -45199118 + AT_rich Low_complexity Low_complexity 1 37 0 1 1511 972 321 26 30 chrX 121451357 121451789 -45198507 + MTE2a-int LTR MaLR 37 587 -993 1 1511 1606 316 155 39 chrX 121451802 121452552 -45197744 + MTE2a-int LTR MaLR 743 1579 -1 1 1511 690 316 35 103 chrX 121452553 121452923 -45197373 + MTE2a LTR MaLR 1 345 -34 1 1511 183 49 73 0 chrX 121453017 121453058 -45197238 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 1 1511 530 29 0 14 chrX 121453112 121453181 -45197115 + (TTA)n Simple_repeat Simple_repeat 3 70 0 1 1511 390 372 14 20 chrX 121453187 121453335 -45196961 - RSINE1 SINE B4 -15 150 4 1 1511 281 82 20 0 chrX 121453351 121453400 -45196896 + (TTTTTG)n Simple_repeat Simple_repeat 3 52 0 1 1511 778 261 36 36 chrX 121453411 121453634 -45196662 - MTD LTR MaLR -194 225 3 1 1511 628 311 19 9 chrX 121453721 121453932 -45196364 + ID_B1 SINE B4 4 216 -8 1 1511 351 0 0 0 chrX 121454262 121454301 -45195995 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1511 426 250 11 0 chrX 121454627 121454715 -45195581 - ID_B1 SINE B4 -1 223 135 1 1511 21 0 0 0 chrX 121455578 121455599 -45194697 + AT_rich Low_complexity Low_complexity 1 21 0 1 1511 650 13 13 0 chrX 121455732 121455811 -45194485 + (GA)n Simple_repeat Simple_repeat 1 80 0 1 1511 269 64 43 0 chrX 121455860 121455907 -45194389 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 1 1511 8238 140 21 25 chrX 121455910 121456868 -45193428 - Lx3A LINE L1 -6 6975 6038 1 1511 210 37 0 0 chrX 121456868 121456895 -45193401 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 1 1511 8238 142 30 38 chrX 121456895 121458252 -45192044 - Lx3A LINE L1 -944 6037 4681 1 1511 227 283 130 65 chrX 121458253 121458453 -45191843 - RMER12 LTR ERVK -9 1313 1101 1 1511 225 0 0 0 chrX 121458688 121458713 -45191583 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1511 2003 123 8 28 chrX 121458718 121459082 -45191214 - RLTR22_Mus LTR ERVK -983 825 354 1 1511 408 106 0 0 chrX 121459091 121459157 -45191139 - L1_Mm LINE L1 -2157 3726 3661 1 1511 552 146 0 0 chrX 121459162 121459258 -45191038 + L1_Mus2 LINE L1 2128 2223 -3660 1 1511 4181 96 4 0 chrX 121459258 121459818 -45190478 + IAPEY3-int LTR ERVK 1421 1982 -5698 1 1511 3339 83 11 0 chrX 121459795 121460242 -45190054 + IAPEY3-int LTR ERVK 2238 2689 -4991 1 1511 495 34 0 0 chrX 121460235 121460294 -45190002 + IAPEY3-int LTR ERVK 4852 4910 -2770 1 1511 4002 116 23 7 chrX 121460294 121460902 -45189394 + IAPEy-int LTR ERVK 6896 7513 0 1 1511 2918 56 0 0 chrX 121460902 121461259 -45189037 + IAPEY2_LTR LTR ERVK 1 357 0 1 1511 8551 114 2 2 chrX 121461260 121463203 -45187093 + L1_Mus2 LINE L1 4623 6566 0 1 1511 580 51 0 0 chrX 121463206 121463284 -45187012 - RLTR22_Mus LTR ERVK -1437 371 294 1 1511 200 94 31 0 chrX 121463284 121463316 -45186980 + (TTTC)n Simple_repeat Simple_repeat 4 36 0 1 1511 1909 133 3 7 chrX 121463820 121464122 -45186174 - RLTR22_Mus LTR ERVK -1505 303 3 1 1511 11685 143 33 13 chrX 121464124 121464716 -45185580 - Lx3A LINE L1 -1184 4702 4123 1 1511 369 0 0 0 chrX 121464716 121464757 -45185539 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1511 11685 143 33 13 chrX 121464757 121466314 -45183982 - Lx3A LINE L1 -1764 4122 2510 1 1511 1559 199 54 88 chrX 121466314 121466721 -45183575 - RLTR9C LTR ERVK 0 393 1 1 1511 481 92 0 26 chrX 121466723 121466801 -45183495 - ETnERV2-int LTR ERVK -4 7402 7327 1 1511 1078 195 12 58 chrX 121467011 121467597 -45182699 - ETnERV2-int LTR ERVK -1703 3141 2901 1 1511 2161 83 23 3 chrX 121467606 121467908 -45182388 + IAPLTR2b LTR ERVK 1 308 -19 1 1511 4716 123 88 66 chrX 121467928 121468862 -45181434 + IAPEz-int LTR ERVK 1 995 -5486 1 1511 388 88 0 0 chrX 121468862 121468919 -45181377 + B1_Mus1 SINE Alu 1 57 -91 1 1511 1857 75 4 0 chrX 121468924 121469163 -45181133 + IAPEY3-int LTR ERVK 2258 2497 -5183 1 1511 13283 85 14 9 chrX 121469162 121470979 -45179317 + IAPEz-int LTR ERVK 4656 6481 0 1 1511 2518 54 35 0 chrX 121470979 121471293 -45179003 + IAPLTR2b LTR ERVK 1 325 -2 1 1511 3934 188 39 31 chrX 121471293 121472745 -45177551 - ETnERV2-int LTR ERVK -3321 4085 2358 1 1511 932 139 0 18 chrX 121473297 121473465 -45176831 - RLTR13D1 LTR ERVK -156 650 486 1 1511 2264 194 26 26 chrX 121473465 121473967 -45176329 - ETnERV2-int LTR ERVK -4409 2997 2496 1 1511 4046 203 27 107 chrX 121473994 121475255 -45175041 - MMETn-int LTR ERVK -3675 1169 10 1 1511 1588 197 32 64 chrX 121475264 121475670 -45174626 - RLTR9C LTR ERVK 0 393 1 1 1511 3492 164 14 101 chrX 121475670 121477090 -45173206 - L1_Mur1 LINE L1 -3371 2515 1429 1 1511 223 49 0 47 chrX 121478893 121478936 -45171360 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 1511 276 52 62 49 chrX 121479042 121479123 -45171173 + T-rich Low_complexity Low_complexity 2 83 0 1 1511 338 290 112 113 chrX 121479167 121479543 -45170753 - L1MC4 LINE L1 -2869 3345 3138 1 1511 23 97 0 0 chrX 121480042 121480114 -45170182 + AT_rich Low_complexity Low_complexity 1 72 0 1 1511 223 246 0 0 chrX 121480486 121480555 -45169741 + T-rich Low_complexity Low_complexity 1 69 0 1 1511 408 55 0 0 chrX 121480677 121480732 -45169564 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1511 26 64 0 0 chrX 121480981 121481028 -45169268 + AT_rich Low_complexity Low_complexity 1 47 0 1 1511 198 91 0 0 chrX 121481088 121481121 -45169175 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1511 222 37 0 0 chrX 121481239 121481266 -45169030 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 1511 218 56 0 27 chrX 121481609 121481646 -45168650 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1511 194 0 39 0 chrX 121481742 121481768 -45168528 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1 1511 1015 109 0 0 chrX 121481768 121481915 -45168381 - B1_Mus1 SINE Alu 0 148 2 1 1511 204 149 0 60 chrX 121481998 121482048 -45168248 + A-rich Low_complexity Low_complexity 3 49 0 1 1511 1117 62 7 0 chrX 121482260 121482405 -45167891 - B1_Mus2 SINE Alu 0 147 2 1 1511 387 41 0 0 chrX 121482707 121482756 -45167540 + (T)n Simple_repeat Simple_repeat 1 49 0 1 1511 240 35 0 0 chrX 121483607 121483636 -45166660 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1 1511 1013 98 14 0 chrX 121483636 121483779 -45166517 - B1_Mus1 SINE Alu -2 146 2 1 1511 22 0 0 0 chrX 121483814 121483836 -45166460 + AT_rich Low_complexity Low_complexity 1 22 0 1 1511 204 67 0 0 chrX 121483836 121483866 -45166430 + (CAA)n Simple_repeat Simple_repeat 1 30 0 1 1511 207 0 0 0 chrX 121483893 121483916 -45166380 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1511 404 37 0 18 chrX 121483957 121484012 -45166284 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 1 1511 952 56 0 0 chrX 121484012 121484138 -45166158 - B1_Mus2 SINE Alu -10 137 12 1 1511 216 250 0 32 chrX 121484180 121484275 -45166021 + A-rich Low_complexity Low_complexity 5 96 0 1 1511 249 33 0 0 chrX 121484371 121484401 -45165895 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 1511 193 75 50 0 chrX 121484509 121484549 -45165747 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 1 1511 195 114 0 0 chrX 121484781 121484816 -45165480 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1511 216 0 0 0 chrX 121484851 121484875 -45165421 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1511 21 36 0 0 chrX 121485157 121485185 -45165111 + AT_rich Low_complexity Low_complexity 1 28 0 1 1511 216 0 0 0 chrX 121485209 121485233 -45165063 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1511 203 136 0 78 chrX 121486024 121486088 -45164208 + T-rich Low_complexity Low_complexity 1 59 0 1 1511 305 359 50 46 chrX 121486189 121486408 -45163888 - L1MEc LINE L1 -4919 1481 1262 1 1511 23 33 0 0 chrX 121486912 121486942 -45163354 + AT_rich Low_complexity Low_complexity 1 30 0 1 1511 23 0 0 0 chrX 121487099 121487122 -45163174 + AT_rich Low_complexity Low_complexity 1 23 0 1 1511 21 0 0 0 chrX 121487145 121487166 -45163130 + AT_rich Low_complexity Low_complexity 1 21 0 1 1511 23 97 0 0 chrX 121487305 121487377 -45162919 + AT_rich Low_complexity Low_complexity 1 72 0 1 1511 261 109 0 0 chrX 121487467 121487513 -45162783 + (T)n Simple_repeat Simple_repeat 1 46 0 1 1511 609 14 0 0 chrX 121487656 121487726 -45162570 + (TAA)n Simple_repeat Simple_repeat 1 70 0 1 1511 326 153 26 77 chrX 121488334 121488490 -45161806 + (TAA)n Simple_repeat Simple_repeat 3 150 0 1 1511 225 65 0 0 chrX 121488633 121488664 -45161632 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1511 783 160 20 14 chrX 121488672 121488818 -45161478 - B1_Mus1 SINE Alu 0 148 2 1 1511 216 0 0 0 chrX 121488869 121488893 -45161403 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1 1511 252 0 0 0 chrX 121488891 121488919 -45161377 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1511 1277 78 6 0 chrX 121489163 121489342 -45160954 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1511 369 207 0 0 chrX 121489351 121489433 -45160863 + CT-rich Low_complexity Low_complexity 4 85 0 1 1511 756 136 0 0 chrX 121489451 121489576 -45160720 + (TTC)n Simple_repeat Simple_repeat 2 126 0 1 1511 883 122 14 7 chrX 121489595 121489735 -45160561 - B1_Mus1 SINE Alu -6 142 2 1 1511 230 284 11 49 chrX 121489741 121489926 -45160370 + A-rich Low_complexity Low_complexity 3 180 0 1 1511 716 188 6 22 chrX 121490058 121490238 -45160058 + CT-rich Low_complexity Low_complexity 2 178 0 1 1511 805 178 7 0 chrX 121490238 121490384 -45159912 - B1_Mus1 SINE Alu 0 148 2 1 1511 24 0 0 0 chrX 121490418 121490442 -45159854 + AT_rich Low_complexity Low_complexity 1 24 0 1 1511 254 50 25 0 chrX 121490492 121490532 -45159764 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 1 1511 476 25 36 36 chrX 121490762 121490845 -45159451 + (TTTTG)n Simple_repeat Simple_repeat 2 84 0 1 1511 812 177 0 0 chrX 121490851 121490992 -45159304 - B1_Mus1 SINE Alu -6 142 2 1 1511 372 230 13 45 chrX 121491007 121491162 -45159134 + A-rich Low_complexity Low_complexity 1 150 0 1 1511 219 36 0 0 chrX 121491184 121491212 -45159084 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1511 22 0 0 0 chrX 121491258 121491280 -45159016 + AT_rich Low_complexity Low_complexity 1 22 0 1 1511 981 92 0 0 chrX 121491312 121491454 -45158842 + (TTTC)n Simple_repeat Simple_repeat 2 143 0 1 1511 815 161 7 0 chrX 121491474 121491611 -45158685 - B1_Mus1 SINE Alu -8 140 3 1 1511 202 138 0 134 chrX 121491657 121491724 -45158572 + A-rich Low_complexity Low_complexity 1 58 0 1 1511 746 130 0 8 chrX 121491939 121492071 -45158225 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 1 1511 854 129 14 0 chrX 121492076 121492215 -45158081 - B1_Mus1 SINE Alu -6 142 2 1 1511 28 0 0 0 chrX 121492308 121492336 -45157960 + AT_rich Low_complexity Low_complexity 1 28 0 1 1511 198 0 0 0 chrX 121492429 121492451 -45157845 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 1 1511 856 129 6 13 chrX 121492573 121492730 -45157566 + (TTTC)n Simple_repeat Simple_repeat 2 157 0 1 1511 809 161 14 0 chrX 121492730 121492873 -45157423 - B1_Mus1 SINE Alu 0 148 4 1 1511 226 313 0 0 chrX 121494478 121494561 -45155735 - MurSAT1 Satellite Satellite -33 87 5 1 1511 237 329 0 0 chrX 121495227 121495306 -45154990 - MurSAT1 Satellite Satellite -35 85 7 1 1511 298 288 6 6 chrX 121495350 121495457 -45154839 - MurSAT1 Satellite Satellite -38 107 1 1 1511 247 340 5 5 chrX 121495929 121496072 -45154224 - MurSAT1 Satellite Satellite -2 143 1 1 1511 241 345 0 0 chrX 121496227 121496340 -45153956 - MurSAT1 Satellite Satellite 0 120 8 1 1511 277 293 6 6 chrX 121496473 121496586 -45153710 - MurSAT1 Satellite Satellite -6 113 1 1 1511 268 367 0 0 chrX 121497001 121497150 -45153146 - MurSAT1 Satellite Satellite 0 149 1 1 1511 365 322 17 17 chrX 121497362 121497709 -45152587 - MurSAT1 Satellite Satellite -1 347 1 1 1511 300 324 0 0 chrX 121498053 121498162 -45152134 - MurSAT1 Satellite Satellite -4 116 1 1 1511 320 301 9 9 chrX 121498787 121498901 -45151395 - MurSAT1 Satellite Satellite -1 119 6 1 1511 315 326 11 11 chrX 121498937 121499067 -45151229 - MurSAT1 Satellite Satellite -1 130 1 1 1511 245 231 0 0 chrX 121499390 121499442 -45150854 - MurSAT1 Satellite Satellite -28 92 41 1 1511 261 278 19 19 chrX 121499771 121499893 -45150403 - MurSAT1 Satellite Satellite -28 122 1 1 1511 225 284 24 24 chrX 121500152 121500235 -45150061 - MurSAT1 Satellite Satellite -28 92 10 1 1511 258 330 0 0 chrX 121501206 121501303 -45148993 - MurSAT1 Satellite Satellite -23 97 1 2 1511 266 286 35 12 chrX 121501714 121501799 -45148497 - MurSAT1 Satellite Satellite -27 93 7 3 1511 243 298 35 12 chrX 121502863 121502948 -45147348 - MurSAT1 Satellite Satellite -27 93 7 4 1511 252 330 0 0 chrX 121503504 121503601 -45146695 - MurSAT1 Satellite Satellite -23 97 1 5 1512 243 298 35 12 chrX 121504012 121504097 -45146199 - MurSAT1 Satellite Satellite -27 93 7 6 1512 252 330 0 0 chrX 121504653 121504750 -45145546 - MurSAT1 Satellite Satellite -23 97 1 7 1512 293 279 36 6 chrX 121505161 121505277 -45145019 - MurSAT1 Satellite Satellite -27 119 1 8 1512 235 337 0 0 chrX 121505802 121505897 -45144399 - MurSAT1 Satellite Satellite -23 97 3 9 1512 284 313 15 5 chrX 121506310 121506486 -45143810 - MurSAT1 Satellite Satellite -27 177 1 1 1512 309 308 15 5 chrX 121507459 121507635 -45142661 - MurSAT1 Satellite Satellite -27 177 1 1 1512 274 308 15 5 chrX 121508608 121508784 -45141512 - MurSAT1 Satellite Satellite -27 177 1 1 1512 248 291 32 16 chrX 121509777 121509908 -45140388 - MurSAT1 Satellite Satellite -2 133 1 1 1512 338 289 0 0 chrX 121510407 121510504 -45139792 - MurSAT1 Satellite Satellite -23 97 1 1 1512 286 295 10 5 chrX 121510835 121510978 -45139318 - MurSAT1 Satellite Satellite -21 143 1 1 1512 320 325 11 11 chrX 121511180 121511384 -45138912 - MurSAT1 Satellite Satellite -1 204 1 1 1512 228 315 35 35 chrX 121511424 121511539 -45138757 - MurSAT1 Satellite Satellite -5 115 1 1 1512 232 330 9 9 chrX 121511946 121512053 -45138243 - MurSAT1 Satellite Satellite -11 109 3 1 1512 310 21 21 21 chrX 121518181 121518229 -45132067 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 1 1512 2949 116 7 0 chrX 121518401 121518834 -45131462 + L1_Mus3 LINE L1 6197 6632 -6 1 1512 1219 63 0 12 chrX 121519580 121519822 -45130474 + (TTTC)n Simple_repeat Simple_repeat 1 239 0 2 1512 342 0 0 0 chrX 121519823 121519861 -45130435 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 2 1512 575 182 200 7 chrX 121519861 121520016 -45130280 - B2_Mm2 SINE B2 -10 185 1 2 1512 337 127 12 12 chrX 121524609 121524689 -45125607 + (TATG)n Simple_repeat Simple_repeat 1 80 0 2 1512 252 239 0 14 chrX 121524692 121524764 -45125532 + CT-rich Low_complexity Low_complexity 1 71 0 2 1512 536 246 59 18 chrX 121524799 121524969 -45125327 + ORR1B2 LTR MaLR 1 177 -190 2 1512 2028 211 57 76 chrX 121525034 121525107 -45125189 - RLTR21 LTR ERVK -368 1204 1131 2 1512 336 24 0 0 chrX 121525107 121525148 -45125148 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1512 2028 211 57 76 chrX 121525148 121525742 -45124554 - RLTR21 LTR ERVK -442 1130 550 2 1512 1319 221 20 78 chrX 121525779 121526123 -45124173 - RLTR21 LTR ERVK -1248 324 1 2 1512 237 292 0 40 chrX 121526491 121526616 -45123680 - Lx6 LINE L1 -17 7443 7324 2 1512 304 320 41 50 chrX 121526617 121526837 -45123459 - Lx6 LINE L1 -1338 6122 5905 2 1512 2108 195 24 31 chrX 121526843 121527026 -45123270 - MTC LTR MaLR 0 421 237 2 1512 6299 107 6 1 chrX 121527026 121527915 -45122381 + RLTR13B1 LTR ERVK 1 893 0 3 1512 2108 195 24 31 chrX 121527915 121528155 -45122141 - MTC LTR MaLR -185 236 1 2 1512 779 240 35 46 chrX 121528158 121528442 -45121854 - Lx7 LINE L1 -1796 5900 5620 3 1512 883 209 41 34 chrX 121528462 121528755 -45121541 - L1_Mur3 LINE L1 -2593 3287 2993 3 1512 5856 108 3 2 chrX 121528760 121529652 -45120644 - L1_Mus2 LINE L1 0 6566 5674 3 1512 3496 36 0 0 chrX 121529653 121530128 -45120168 - L1Md_F3 LINE L1 -562 6022 5548 3 1512 4353 58 0 2 chrX 121530128 121530678 -45119618 + L1Md_F3 LINE L1 6034 6582 -2 3 1512 770 181 7 0 chrX 121530681 121530819 -45119477 - L1_Mm LINE L1 -198 5685 5547 3 1512 4793 95 15 12 chrX 121530850 121532246 -45118050 + L1Md_F LINE L1 505 1904 -3979 3 1512 442 315 20 10 chrX 121532650 121532849 -45117447 - Lx8 LINE L1 -941 6532 6332 3 1512 333 284 60 27 chrX 121533193 121533470 -45116826 - Lx8 LINE L1 -175 5672 5401 3 1512 2897 255 44 15 chrX 121533479 121534231 -45116065 + ORR1D-int LTR MaLR 455 1228 -142 3 1512 407 146 73 0 chrX 121534353 121534435 -45115861 + MERVL_2A-int LTR ERVL 5674 5761 0 3 1512 552 244 7 44 chrX 121534435 121534572 -45115724 + MT2A LTR ERVL 1 132 -401 3 1512 1742 196 12 0 chrX 121534687 121535029 -45115267 - Lx7 LINE L1 -694 7002 6657 4 1512 461 278 29 83 chrX 121535024 121535037 -45115259 + Lx7 LINE L1 7305 7317 -379 4 1512 2218 109 16 3 chrX 121535037 121535360 -45114936 + ORR1A2 LTR MaLR 1 327 0 4 1512 461 278 29 83 chrX 121535360 121535730 -45114566 + Lx7 LINE L1 7318 7667 -29 4 1512 6374 243 35 114 chrX 121535728 121540216 -45110080 - Lx5 LINE L1 -19 7031 2881 4 1512 360 305 34 41 chrX 121540216 121540363 -45109933 - RLTR22_Mur LTR ERVK -73 1249 1104 4 1512 957 282 116 80 chrX 121540509 121541314 -45108982 - RLTR22_Mur LTR ERVK -1046 802 1 4 1512 690 303 8 17 chrX 121541314 121541676 -45108620 - Lx5 LINE L1 -6466 1262 904 4 1512 338 312 68 82 chrX 121542179 121542385 -45107911 - MTE2a LTR MaLR -10 369 167 4 1512 6721 53 5 0 chrX 121542391 121543278 -45107018 - L1Md_F3 LINE L1 -14 6570 5680 4 1512 364 282 76 61 chrX 121543278 121543410 -45106886 - MTE2a LTR MaLR -181 198 65 4 1512 991 117 7 0 chrX 121543437 121543582 -45106714 - B1_Mm SINE Alu 0 147 2 4 1512 239 159 0 0 chrX 121543622 121543666 -45106630 - MTE2a LTR MaLR -330 49 6 4 1512 1248 277 84 20 chrX 121543737 121544080 -45106216 + ORR1D1 LTR MaLR 9 373 -1 4 1512 1935 239 76 37 chrX 121544548 121545061 -45105235 - RLTR20B3 LTR ERVK -44 533 1 4 1512 21 36 0 0 chrX 121545094 121545122 -45105174 + AT_rich Low_complexity Low_complexity 1 28 0 5 1512 227 383 24 12 chrX 121545254 121545418 -45104878 + HAL1 LINE L1 201 366 -2141 5 1512 200 211 0 0 chrX 121545852 121545890 -45104406 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 5 1512 216 0 0 0 chrX 121546034 121546058 -45104238 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1512 1582 106 9 16 chrX 121546339 121546597 -45103699 + RLTR13A LTR ERVK 1 251 -651 5 1512 30797 38 0 1 chrX 121546597 121551212 -45099084 - L1Md_T LINE L1 -66 6516 1908 5 1512 1699 98 18 36 chrX 121551212 121551488 -45098808 + RLTR13A LTR ERVK 84 354 -501 5 1512 21 71 0 0 chrX 121551512 121551554 -45098742 + AT_rich Low_complexity Low_complexity 1 42 0 5 1512 254 178 0 0 chrX 121551684 121551729 -45098567 + L1_Mur3 LINE L1 3480 3524 -2356 5 1512 301 345 11 0 chrX 121551787 121551874 -45098422 - RSINE1 SINE B4 -10 155 68 5 1512 337 293 54 54 chrX 121551878 121552062 -45098234 + L1M2 LINE L1 3738 3921 -2222 6 1512 2337 168 12 47 chrX 121552069 121552576 -45097720 - Lx2B LINE L1 -708 6292 5804 6 1512 443 0 44 15 chrX 121552638 121552706 -45097590 + (TTTTTG)n Simple_repeat Simple_repeat 3 72 0 6 1512 698 119 0 0 chrX 121552707 121552808 -45097488 - B1_Mus2 SINE Alu 0 147 47 6 1512 303 214 88 104 chrX 121552734 121552859 -45097437 - MT2B LTR ERVL -325 276 154 6 1512 2584 200 41 15 chrX 121552860 121553468 -45096828 - Lx2B LINE L1 -159 5727 5104 6 1512 2275 195 52 16 chrX 121553459 121553959 -45096337 + Lx2B LINE L1 6477 6994 -6 6 1512 363 344 115 70 chrX 121554060 121554101 -45096195 - MT2A LTR ERVL -1 600 547 6 1512 588 14 0 0 chrX 121554101 121554170 -45096126 + (TG)n Simple_repeat Simple_repeat 2 70 0 6 1512 899 282 105 30 chrX 121554170 121554556 -45095740 - MT2A LTR ERVL -55 546 1 6 1512 250 346 0 0 chrX 121554875 121554956 -45095340 + ORR1D2 LTR MaLR 6 86 -284 6 1512 2238 60 0 0 chrX 121555038 121555323 -45094973 + L1Md_F2 LINE L1 6298 6582 0 6 1512 4849 110 8 5 chrX 121555340 121556090 -45094206 + L1_Mm LINE L1 4952 5703 -180 7 1512 2627 139 24 24 chrX 121556086 121556409 -45093887 - Lx3_Mus LINE L1 -769 6240 5913 7 1512 216 0 0 0 chrX 121556409 121556433 -45093863 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1512 2627 139 24 24 chrX 121556433 121556567 -45093729 - Lx3_Mus LINE L1 -1097 5912 5783 7 1512 525 293 58 54 chrX 121557311 121557700 -45092596 - MuLV-int LTR ERV1 -147 7459 7115 7 1512 636 138 29 25 chrX 121559199 121559344 -45090952 - RMER17D2 LTR ERVK -10 896 703 7 1512 1035 118 0 88 chrX 121559348 121559553 -45090743 - Lx3C LINE L1 -901 6075 5889 7 1512 24 53 0 0 chrX 121559635 121559673 -45090623 + AT_rich Low_complexity Low_complexity 1 38 0 7 1512 1133 266 18 21 chrX 121559772 121560052 -45090244 - ORR1B1 LTR MaLR 0 394 116 7 1512 2746 270 63 16 chrX 121560055 121561042 -45089254 + RMER1B Other Other 106 1062 -4 7 1512 246 116 0 0 chrX 121561312 121561355 -45088941 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1512 258 355 91 27 chrX 121561556 121561666 -45088630 + PB1 SINE Alu 6 122 -5 8 1512 465 250 85 20 chrX 121561956 121562156 -45088140 - L1MD3 LINE L1 -10 7985 7773 8 1512 915 243 146 52 chrX 121562221 121562285 -45088011 - ORR1D2 LTR MaLR 0 394 305 8 1512 188 34 0 33 chrX 121562285 121562315 -45087981 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 8 1512 915 244 147 55 chrX 121562315 121562599 -45087697 - ORR1D2 LTR MaLR -79 315 24 8 1512 918 52 0 0 chrX 121562695 121562811 -45087485 + (TTCC)n Simple_repeat Simple_repeat 2 117 0 8 1512 518 309 37 0 chrX 121562927 121563063 -45087233 + RSINE1 SINE B4 3 143 -22 8 1512 648 59 0 0 chrX 121563087 121563172 -45087124 + (CA)n Simple_repeat Simple_repeat 1 85 0 8 1512 248 53 26 0 chrX 121563172 121563210 -45087086 + (CCA)n Simple_repeat Simple_repeat 3 41 0 8 1512 224 188 0 20 chrX 121563225 121563262 -45087034 + polypurine Low_complexity Low_complexity 1 36 0 8 1512 282 87 0 0 chrX 121563262 121563308 -45086988 + (CAGAGA)n Simple_repeat Simple_repeat 2 47 0 8 1512 224 188 0 20 chrX 121563308 121563319 -45086977 + polypurine Low_complexity Low_complexity 37 47 0 9 1512 1849 189 3 8 chrX 121563351 121563734 -45086562 - Lx2 LINE L1 -713 6284 5904 9 1512 748 182 0 7 chrX 121563734 121563889 -45086407 + Lx2 LINE L1 6844 6997 0 9 1512 1166 254 57 83 chrX 121563905 121564292 -45086004 + ORR1C2 LTR MaLR 8 384 0 9 1512 197 108 0 26 chrX 121565114 121565152 -45085144 + (CATA)n Simple_repeat Simple_repeat 4 40 0 9 1512 768 22 0 0 chrX 121565344 121565434 -45084862 + (TTC)n Simple_repeat Simple_repeat 2 91 0 9 1512 653 68 0 0 chrX 121565434 121565522 -45084774 - B1_Mus2 SINE Alu -58 89 2 9 1512 431 325 16 24 chrX 121565755 121565878 -45084418 + B3 SINE B2 2 123 -93 9 1512 813 171 26 7 chrX 121565901 121566054 -45084242 + Lx2B LINE L1 6156 6311 -689 9 1512 1512 250 61 26 chrX 121566046 121566502 -45083794 + Lx2B LINE L1 6524 6995 -5 9 1512 22 0 0 0 chrX 121567124 121567146 -45083150 + AT_rich Low_complexity Low_complexity 1 22 0 9 1512 297 125 0 0 chrX 121567539 121567595 -45082701 + (TTTTTG)n Simple_repeat Simple_repeat 6 61 0 1 1512 329 239 0 32 chrX 121567595 121567690 -45082606 + RNLTR23 LTR ERVK 551 642 0 1 1512 564 322 98 20 chrX 121568606 121568850 -45081446 + Lx7 LINE L1 7036 7298 -398 1 1512 414 57 0 0 chrX 121568889 121568942 -45081354 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 1512 529 76 22 0 chrX 121568942 121569034 -45081262 + (TG)n Simple_repeat Simple_repeat 1 94 0 1 1512 246 128 0 0 chrX 121569101 121569140 -45081156 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 1512 2820 61 56 3 chrX 121569556 121569932 -45080364 - MTA_Mm LTR MaLR 0 396 1 1 1512 23 33 0 0 chrX 121570675 121570705 -45079591 + AT_rich Low_complexity Low_complexity 1 30 0 1 1512 439 244 34 75 chrX 121570784 121570930 -45079366 + Lx9 LINE L1 6962 7101 -543 1 1512 374 315 74 10 chrX 121570980 121571182 -45079114 + Lx9 LINE L1 7225 7439 -205 1 1512 405 0 0 0 chrX 121571199 121571244 -45079052 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1512 30 27 0 0 chrX 121571340 121571377 -45078919 + AT_rich Low_complexity Low_complexity 1 37 0 1 1512 930 319 32 30 chrX 121571556 121571985 -45078311 + MTE2a-int LTR MaLR 37 587 -993 1 1512 1687 313 153 39 chrX 121571998 121572749 -45077547 + MTE2a-int LTR MaLR 743 1579 -1 1 1512 737 313 35 100 chrX 121572750 121573119 -45077177 + MTE2a LTR MaLR 1 345 -34 1 1512 204 122 0 0 chrX 121573214 121573255 -45077041 + (T)n Simple_repeat Simple_repeat 1 41 0 1 1512 530 29 0 14 chrX 121573309 121573378 -45076918 + (TTA)n Simple_repeat Simple_repeat 3 70 0 1 1512 390 372 14 20 chrX 121573384 121573532 -45076764 - RSINE1 SINE B4 -15 150 4 1 1512 281 82 20 0 chrX 121573548 121573597 -45076699 + (TTTTTG)n Simple_repeat Simple_repeat 3 52 0 1 1512 783 261 36 31 chrX 121573608 121573830 -45076466 - MTD LTR MaLR -194 225 3 1 1512 638 308 19 9 chrX 121573917 121574127 -45076169 + ID_B1 SINE B4 4 215 -9 1 1512 315 0 0 0 chrX 121574457 121574492 -45075804 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1512 210 412 108 0 chrX 121574494 121574596 -45075700 - B3A SINE B2 -17 181 69 1 1512 441 239 11 0 chrX 121574824 121574912 -45075384 - ID_B1 SINE B4 -1 223 135 1 1512 21 0 0 0 chrX 121575776 121575797 -45074499 + AT_rich Low_complexity Low_complexity 1 21 0 1 1512 308 24 24 0 chrX 121575930 121575971 -45074325 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 1512 440 33 0 32 chrX 121576020 121576083 -45074213 + (TTTA)n Simple_repeat Simple_repeat 1 61 0 1 1512 8209 140 22 25 chrX 121576086 121577043 -45073253 - Lx3A LINE L1 -6 6975 6038 1 1512 210 37 0 0 chrX 121577043 121577070 -45073226 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 1 1512 8209 140 35 24 chrX 121577070 121578207 -45072089 - Lx3A LINE L1 -944 6037 4849 1 1512 522 0 0 0 chrX 121578207 121578265 -45072031 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 1512 6697 140 42 23 chrX 121578265 121578449 -45071847 - Lx3A LINE L1 -1038 4848 4682 1 1512 227 283 130 65 chrX 121578450 121578650 -45071646 - RMER12 LTR ERVK -9 1313 1101 1 1512 327 113 0 0 chrX 121578885 121578947 -45071349 + (A)n Simple_repeat Simple_repeat 1 62 0 1 1512 2011 123 8 28 chrX 121578952 121579316 -45070980 - RLTR22_Mus LTR ERVK -983 825 354 1 1512 410 113 0 14 chrX 121579319 121579391 -45070905 - L1_Mm LINE L1 -2152 3731 3661 1 1512 552 146 0 0 chrX 121579396 121579492 -45070804 + L1_Mus2 LINE L1 2128 2223 -3660 1 1512 4207 93 4 0 chrX 121579492 121580052 -45070244 + IAPEY3-int LTR ERVK 1421 1982 -5698 1 1512 3302 85 11 0 chrX 121580029 121580476 -45069820 + IAPEY3-int LTR ERVK 2238 2689 -4991 1 1512 495 34 0 0 chrX 121580469 121580528 -45069768 + IAPEY3-int LTR ERVK 4852 4910 -2770 1 1512 4049 117 21 7 chrX 121580528 121581137 -45069159 + IAPEy-int LTR ERVK 6896 7513 0 1 1512 3000 45 0 0 chrX 121581137 121581494 -45068802 + IAPEY2_LTR LTR ERVK 1 357 0 1 1512 8565 108 2 3 chrX 121581495 121583439 -45066857 + L1_Mus2 LINE L1 4623 6566 0 1 1512 580 51 0 0 chrX 121583442 121583520 -45066776 - RLTR22_Mus LTR ERVK -1437 371 294 1 1512 207 100 0 0 chrX 121583520 121583550 -45066746 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 1 1512 1897 137 3 7 chrX 121584054 121584356 -45065940 - RLTR22_Mus LTR ERVK -1505 303 3 1 1512 11751 143 33 12 chrX 121584358 121584946 -45065350 - L1_Mur1 LINE L1 -1184 4702 4123 1 1512 333 0 0 0 chrX 121584946 121584983 -45065313 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1512 11751 143 33 12 chrX 121584983 121586541 -45063755 - L1_Mur1 LINE L1 -1764 4122 2510 1 1512 1519 212 27 61 chrX 121586541 121586948 -45063348 - RLTR9C LTR ERVK 0 393 1 1 1512 481 92 0 26 chrX 121586952 121587030 -45063266 - ETnERV2-int LTR ERVK -4 7402 7327 1 1512 1030 199 12 58 chrX 121587240 121587826 -45062470 - ETnERV2-int LTR ERVK -1703 3141 2901 1 1512 747 110 9 14 chrX 121587835 121587964 -45062332 + IAPLTR2b LTR ERVK 1 151 -206 1 1512 4424 111 71 58 chrX 121587964 121588808 -45061488 + IAPEz-int LTR ERVK 211 995 -5486 1 1512 398 70 0 0 chrX 121588808 121588865 -45061431 + B1_Mus1 SINE Alu 1 57 -91 1 1512 1898 67 4 0 chrX 121588870 121589109 -45061187 + IAPEY3-int LTR ERVK 2258 2497 -5183 1 1512 13418 79 15 9 chrX 121589108 121590922 -45059374 + IAPEz-int LTR ERVK 4656 6481 0 1 1512 2501 57 35 0 chrX 121590922 121591236 -45059060 + IAPLTR2b LTR ERVK 1 325 -2 1 1512 3904 187 40 32 chrX 121591236 121592688 -45057608 - ETnERV2-int LTR ERVK -3321 4085 2357 1 1512 901 152 0 18 chrX 121593248 121593416 -45056880 - RLTR13D1 LTR ERVK -156 650 486 1 1512 2339 198 22 20 chrX 121593416 121593917 -45056379 - ETnERV2-int LTR ERVK -4409 2997 2496 1 1512 4199 193 27 108 chrX 121593944 121595206 -45055090 - MMETn-int LTR ERVK -3675 1169 10 1 1512 688 228 55 61 chrX 121595215 121595462 -45054834 - RLTR9E LTR ERVK -7 430 143 1 1512 3542 135 20 0 chrX 121595797 121596396 -45053900 - L1_Mur1 LINE L1 -3847 2039 1429 1 1512 226 67 22 22 chrX 121598195 121598241 -45052055 + (CAAAAA)n Simple_repeat Simple_repeat 4 49 0 1 1512 269 98 60 24 chrX 121598346 121598430 -45051866 + T-rich Low_complexity Low_complexity 3 89 0 1 1512 400 325 78 71 chrX 121598431 121598841 -45051455 - L1MD LINE L1 -2666 3480 3068 1 1512 22 70 0 0 chrX 121599374 121599417 -45050879 + AT_rich Low_complexity Low_complexity 1 43 0 1 1512 335 39 0 144 chrX 121599790 121599880 -45050416 + T-rich Low_complexity Low_complexity 1 77 0 1 1512 507 45 0 0 chrX 121599993 121600059 -45050237 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 1512 192 40 0 0 chrX 121600329 121600354 -45049942 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1 1512 191 61 0 29 chrX 121600415 121600449 -45049847 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1512 222 37 0 0 chrX 121600564 121600591 -45049705 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 1512 354 100 0 0 chrX 121600804 121600864 -45049432 + (T)n Simple_repeat Simple_repeat 1 60 0 1 1512 194 0 39 0 chrX 121601088 121601114 -45049182 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1 1512 1027 102 0 0 chrX 121601114 121601261 -45049035 - B1_Mus1 SINE Alu 0 148 2 1 1512 211 159 0 104 chrX 121601342 121601419 -45048877 + A-rich Low_complexity Low_complexity 3 71 0 1 1512 225 146 0 0 chrX 121601576 121601624 -45048672 + (T)n Simple_repeat Simple_repeat 1 48 0 1 1512 1138 48 7 0 chrX 121601626 121601771 -45048525 - B1_Mus2 SINE Alu 0 147 2 1 1512 27 49 0 0 chrX 121601988 121602029 -45048267 + AT_rich Low_complexity Low_complexity 1 41 0 1 1512 204 40 0 0 chrX 121602894 121602919 -45047377 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1 1512 1046 77 14 0 chrX 121602919 121603062 -45047234 - B1_Mus1 SINE Alu -2 146 2 1 1512 22 0 0 0 chrX 121603097 121603119 -45047177 + AT_rich Low_complexity Low_complexity 1 22 0 1 1512 207 0 0 0 chrX 121603167 121603190 -45047106 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1512 380 20 0 20 chrX 121603231 121603281 -45047015 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1 1512 935 63 0 0 chrX 121603281 121603407 -45046889 - B1_Mus2 SINE Alu -10 137 12 1 1512 200 254 26 26 chrX 121603443 121603556 -45046740 + A-rich Low_complexity Low_complexity 2 114 0 1 1512 249 33 0 0 chrX 121603636 121603666 -45046630 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 1512 198 67 43 22 chrX 121603767 121603813 -45046483 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 1 1512 195 114 0 0 chrX 121604046 121604081 -45046215 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1512 219 69 0 0 chrX 121604116 121604145 -45046151 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1512 225 0 0 0 chrX 121604460 121604485 -45045811 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1 1512 250 257 0 87 chrX 121604575 121604771 -45045525 + T-rich Low_complexity Low_complexity 2 180 0 1 1512 303 270 54 90 chrX 121605284 121605451 -45044845 - L1MDa LINE L1 -4132 2501 2341 1 1512 21 36 0 0 chrX 121605633 121605661 -45044635 + AT_rich Low_complexity Low_complexity 1 28 0 1 1512 297 0 0 0 chrX 121605893 121605926 -45044370 + (T)n Simple_repeat Simple_repeat 1 33 0 1 1512 225 188 0 0 chrX 121605966 121606014 -45044282 + T-rich Low_complexity Low_complexity 1 48 0 1 1512 23 68 0 0 chrX 121606198 121606242 -45044054 + AT_rich Low_complexity Low_complexity 1 44 0 1 1512 23 0 0 0 chrX 121606381 121606404 -45043892 + AT_rich Low_complexity Low_complexity 1 23 0 1 1512 21 0 0 0 chrX 121606426 121606447 -45043849 + AT_rich Low_complexity Low_complexity 1 21 0 1 1512 23 97 0 0 chrX 121606586 121606658 -45043638 + AT_rich Low_complexity Low_complexity 1 72 0 1 1512 252 59 0 0 chrX 121606748 121606782 -45043514 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1512 360 0 0 0 chrX 121606926 121606966 -45043330 + (TAA)n Simple_repeat Simple_repeat 1 40 0 1 1512 276 244 23 41 chrX 121607577 121607748 -45042548 + (TATAA)n Simple_repeat Simple_repeat 3 170 0 1 1512 764 153 20 46 chrX 121607895 121608046 -45042250 - B1_Mus1 SINE Alu 0 148 2 1 1512 1259 79 6 0 chrX 121608229 121608406 -45041890 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 1 1512 455 333 68 15 chrX 121608406 121608671 -45041625 - L1MC4 LINE L1 -4997 1218 940 1 1512 883 122 14 7 chrX 121608672 121608812 -45041484 - B1_Mus1 SINE Alu -6 142 2 1 1512 235 225 0 14 chrX 121608818 121608890 -45041406 + A-rich Low_complexity Low_complexity 3 73 0 1 1512 735 182 6 12 chrX 121609128 121609295 -45041001 + CT-rich Low_complexity Low_complexity 3 168 0 1 1512 219 169 16 33 chrX 121609303 121609364 -45040932 + T-rich Low_complexity Low_complexity 1 60 0 1 1512 883 122 14 7 chrX 121609366 121609506 -45040790 - B1_Mus1 SINE Alu -6 142 2 1 1512 226 281 6 57 chrX 121609512 121609689 -45040607 + A-rich Low_complexity Low_complexity 3 170 0 1 1512 773 176 6 17 chrX 121609829 121610008 -45040288 + CT-rich Low_complexity Low_complexity 2 178 0 1 1512 784 185 7 0 chrX 121610010 121610156 -45040140 - B1_Mus1 SINE Alu 0 148 2 1 1512 24 0 0 0 chrX 121610190 121610214 -45040082 + AT_rich Low_complexity Low_complexity 1 24 0 1 1512 255 130 0 0 chrX 121610266 121610320 -45039976 + (A)n Simple_repeat Simple_repeat 1 54 0 1 1512 198 91 0 0 chrX 121610372 121610405 -45039891 + (A)n Simple_repeat Simple_repeat 1 33 0 1 1512 320 70 27 40 chrX 121610553 121610628 -45039668 + (TTTTG)n Simple_repeat Simple_repeat 1 74 0 1 1512 835 170 0 0 chrX 121610630 121610771 -45039525 - B1_Mus1 SINE Alu -6 142 2 1 1512 384 235 12 40 chrX 121610786 121610959 -45039337 + A-rich Low_complexity Low_complexity 1 168 0 2 1512 254 50 25 0 chrX 121610975 121611015 -45039281 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 2 1512 23 0 0 0 chrX 121611060 121611083 -45039213 + AT_rich Low_complexity Low_complexity 1 23 0 2 1512 730 55 36 0 chrX 121611115 121611225 -45039071 + (TTTC)n Simple_repeat Simple_repeat 2 115 0 2 1512 790 175 7 0 chrX 121611238 121611375 -45038921 - B1_Mus1 SINE Alu -8 140 3 2 1512 697 131 8 8 chrX 121611703 121611834 -45038462 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 2 1512 858 131 14 7 chrX 121611836 121611982 -45038314 - B1_Mus1 SINE Alu 0 148 2 2 1512 28 0 0 0 chrX 121612075 121612103 -45038193 + AT_rich Low_complexity Low_complexity 1 28 0 2 1512 198 0 0 0 chrX 121612195 121612217 -45038079 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 2 1512 207 0 0 0 chrX 121612273 121612296 -45038000 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1512 902 141 0 6 chrX 121612359 121612516 -45037780 + (TTTC)n Simple_repeat Simple_repeat 2 157 0 2 1512 792 168 14 0 chrX 121612516 121612659 -45037637 - B1_Mus1 SINE Alu 0 148 4 2 1512 206 232 0 0 chrX 121612697 121612753 -45037543 + A-rich Low_complexity Low_complexity 1 56 0 2 1512 232 333 0 0 chrX 121615058 121615139 -45035157 - MurSAT1 Satellite Satellite -33 87 7 2 1512 293 272 7 7 chrX 121615183 121615290 -45035006 - MurSAT1 Satellite Satellite -38 107 1 2 1512 255 330 5 5 chrX 121615762 121615905 -45034391 - MurSAT1 Satellite Satellite -2 143 1 2 1512 291 282 6 6 chrX 121616310 121616419 -45033877 - MurSAT1 Satellite Satellite -10 109 1 2 1512 286 349 9 9 chrX 121616856 121616983 -45033313 - MurSAT1 Satellite Satellite -22 127 1 2 1512 381 285 23 23 chrX 121617195 121617482 -45032814 - MurSAT1 Satellite Satellite -1 287 1 2 1512 282 336 0 0 chrX 121617886 121617995 -45032301 - MurSAT1 Satellite Satellite -4 116 1 2 1512 280 319 9 9 chrX 121618620 121618734 -45031562 - MurSAT1 Satellite Satellite -1 119 6 2 1512 318 315 11 11 chrX 121618770 121618900 -45031396 - MurSAT1 Satellite Satellite -1 130 1 2 1512 262 163 0 0 chrX 121619223 121619266 -45031030 - MurSAT1 Satellite Satellite -28 92 50 2 1512 262 163 0 0 chrX 121619604 121619647 -45030649 - MurSAT1 Satellite Satellite -28 92 50 2 1512 285 272 24 24 chrX 121620366 121620449 -45029847 - MurSAT1 Satellite Satellite -28 92 10 2 1512 241 308 13 13 chrX 121620468 121620547 -45029749 - MurSAT1 Satellite Satellite -40 80 2 2 1512 239 361 0 0 chrX 121621420 121621517 -45028779 - MurSAT1 Satellite Satellite -23 97 1 2 1512 282 326 16 5 chrX 121621928 121622099 -45028197 - MurSAT1 Satellite Satellite -27 172 1 2 1512 233 300 18 99 chrX 121622305 121622416 -45027880 - MurSAT1 Satellite Satellite -17 103 2 2 1512 294 312 14 14 chrX 121622569 121622717 -45027579 - MurSAT1 Satellite Satellite -23 148 1 2 1512 315 282 39 6 chrX 121623065 121623193 -45027103 - MurSAT1 Satellite Satellite -14 132 1 2 1512 249 275 25 12 chrX 121623718 121623820 -45026476 - MurSAT1 Satellite Satellite -23 103 1 2 1512 324 313 15 5 chrX 121624226 121624402 -45025894 - MurSAT1 Satellite Satellite -27 177 1 2 1512 290 275 33 33 chrX 121624865 121625015 -45025281 - MurSAT1 Satellite Satellite -21 150 1 2 1512 302 273 36 6 chrX 121625375 121625491 -45024805 - MurSAT1 Satellite Satellite -27 119 1 2 1512 241 297 18 98 chrX 121625752 121625864 -45024432 - MurSAT1 Satellite Satellite -17 103 1 2 1512 274 312 10 10 chrX 121626016 121626113 -45024183 - MurSAT1 Satellite Satellite -23 97 1 2 1512 310 313 15 5 chrX 121626524 121626700 -45023596 - MurSAT1 Satellite Satellite -27 177 1 2 1512 225 300 18 99 chrX 121626901 121627012 -45023284 - MurSAT1 Satellite Satellite -17 103 2 2 1512 249 295 24 24 chrX 121627165 121627313 -45022983 - MurSAT1 Satellite Satellite -23 148 1 2 1512 324 308 15 5 chrX 121627673 121627849 -45022447 - MurSAT1 Satellite Satellite -27 177 1 2 1512 284 273 34 34 chrX 121628314 121628462 -45021834 - MurSAT1 Satellite Satellite -23 148 1 2 1512 324 316 16 5 chrX 121628827 121628998 -45021298 - MurSAT1 Satellite Satellite -32 172 1 2 1512 231 297 18 98 chrX 121629199 121629311 -45020985 - MurSAT1 Satellite Satellite -17 103 1 2 1512 253 263 26 13 chrX 121629463 121629565 -45020731 - MurSAT1 Satellite Satellite -23 103 1 2 1512 309 313 15 5 chrX 121629971 121630147 -45020149 - MurSAT1 Satellite Satellite -27 177 1 2 1512 225 300 18 99 chrX 121630348 121630459 -45019837 - MurSAT1 Satellite Satellite -17 103 2 2 1512 230 271 36 36 chrX 121630649 121630760 -45019536 - MurSAT1 Satellite Satellite 0 120 10 2 1512 309 323 15 5 chrX 121631120 121631296 -45019000 - MurSAT1 Satellite Satellite -27 177 1 2 1512 295 323 26 13 chrX 121632289 121632464 -45017832 - MurSAT1 Satellite Satellite -2 177 1 2 1512 371 250 10 10 chrX 121632919 121633016 -45017280 - MurSAT1 Satellite Satellite -23 97 1 2 1512 314 295 10 5 chrX 121633347 121633490 -45016806 - MurSAT1 Satellite Satellite -21 143 1 2 1512 351 320 13 13 chrX 121633692 121633896 -45016400 - MurSAT1 Satellite Satellite -1 204 1 2 1512 254 335 37 27 chrX 121633936 121634198 -45016098 - MurSAT1 Satellite Satellite -5 264 1 2 1512 291 326 9 9 chrX 121634458 121634590 -45015706 - MurSAT1 Satellite Satellite -11 132 1 2 1513 265 24 23 23 chrX 121640697 121640740 -45009556 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 2 1513 2971 118 7 0 chrX 121640911 121641344 -45008952 + L1_Mus3 LINE L1 6197 6632 -6 2 1513 1266 40 17 11 chrX 121642095 121642272 -45008024 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 2 1513 632 102 0 10 chrX 121642272 121642371 -45007925 + (TTCC)n Simple_repeat Simple_repeat 1 98 0 2 1513 614 173 200 18 chrX 121642371 121642536 -45007760 - B2_Mm2 SINE B2 0 195 1 2 1513 233 277 20 10 chrX 121647103 121647129 -45003167 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 2 1513 481 105 10 10 chrX 121647129 121647225 -45003071 + (TATG)n Simple_repeat Simple_repeat 1 96 0 2 1513 252 239 0 14 chrX 121647225 121647300 -45002996 + CT-rich Low_complexity Low_complexity 1 73 0 2 1513 478 246 59 18 chrX 121647335 121647505 -45002791 + ORR1B2 LTR MaLR 1 177 -190 2 1513 336 24 0 0 chrX 121647643 121647684 -45002612 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1513 1797 186 61 51 chrX 121647689 121648278 -45002018 - RLTR21 LTR ERVK -155 1249 550 2 1513 1201 221 20 78 chrX 121648316 121648660 -45001636 - RLTR21 LTR ERVK -1248 324 1 2 1513 268 295 0 18 chrX 121649028 121649142 -45001154 - Lx6 LINE L1 -17 7443 7332 2 1513 362 320 41 50 chrX 121649154 121649374 -45000922 - Lx6 LINE L1 -1338 6122 5905 2 1513 1924 197 24 31 chrX 121649380 121649563 -45000733 - MTC LTR MaLR 0 421 238 2 1513 6428 106 6 1 chrX 121649563 121650452 -44999844 + RLTR13B1 LTR ERVK 1 893 0 2 1513 1924 197 24 31 chrX 121650452 121650692 -44999604 - MTC LTR MaLR -184 237 1 2 1513 922 241 39 49 chrX 121650695 121650979 -44999317 - Lx7 LINE L1 -1796 5900 5620 2 1513 965 209 41 31 chrX 121650999 121651291 -44999005 - L1_Mur3 LINE L1 -2593 3287 2993 2 1513 6270 108 3 2 chrX 121651296 121652188 -44998108 - L1_Mus2 LINE L1 0 6566 5674 2 1513 3706 34 2 0 chrX 121652189 121652663 -44997633 - L1Md_F3 LINE L1 -562 6022 5548 2 1513 4393 60 0 2 chrX 121652663 121653213 -44997083 + L1Md_F3 LINE L1 6034 6582 -2 2 1513 826 186 7 0 chrX 121653216 121653356 -44996940 - L1_Mm LINE L1 -198 5685 5545 2 1513 5120 95 15 12 chrX 121653385 121654781 -44995515 + L1Md_F LINE L1 505 1904 -3979 2 1513 481 315 20 10 chrX 121655185 121655384 -44994912 - Lx8 LINE L1 -941 6532 6332 2 1513 406 298 52 22 chrX 121655728 121656005 -44994291 - L1M2 LINE L1 -431 5740 5449 2 1513 2594 254 44 15 chrX 121656014 121656766 -44993530 + ORR1D-int LTR MaLR 455 1228 -142 2 1513 415 158 73 0 chrX 121656888 121656970 -44993326 + MERVL_2A-int LTR ERVL 5674 5761 0 2 1513 502 244 7 44 chrX 121656970 121657107 -44993189 + MT2A LTR ERVL 1 132 -401 2 1513 1876 196 12 0 chrX 121657222 121657564 -44992732 - Lx7 LINE L1 -694 7002 6657 2 1513 601 275 26 92 chrX 121657559 121657572 -44992724 + Lx7 LINE L1 7305 7317 -379 2 1513 2219 112 16 3 chrX 121657572 121657895 -44992401 + ORR1A2 LTR MaLR 1 327 0 2 1513 601 275 26 92 chrX 121657895 121658270 -44992026 + Lx7 LINE L1 7318 7667 -29 2 1513 7369 239 37 117 chrX 121658268 121662760 -44987536 - Lx5 LINE L1 -19 7031 2881 2 1513 297 307 41 48 chrX 121662760 121662907 -44987389 - RLTR22_Mur LTR ERVK -73 1249 1104 2 1513 32284 8 0 0 chrX 121662966 121668753 -44981543 + L1Md_A LINE L1 1 5586 -297 2 1513 8999 2 0 1 chrX 121668753 121669750 -44980546 + L1Md_A LINE L1 5587 6582 0 2 1513 1042 278 116 80 chrX 121669859 121670664 -44979632 - RLTR22_Mur LTR ERVK -1046 802 1 2 1513 765 312 8 14 chrX 121670664 121671025 -44979271 - Lx5 LINE L1 -6466 1262 904 2 1513 207 0 0 0 chrX 121671025 121671048 -44979248 + (T)n Simple_repeat Simple_repeat 1 23 0 2 1513 321 318 68 82 chrX 121671539 121671745 -44978551 - MTE2a LTR MaLR -10 369 167 2 1513 6979 55 1 11 chrX 121671749 121672649 -44977647 - L1Md_F3 LINE L1 -14 6570 5680 2 1513 362 288 70 62 chrX 121672649 121672794 -44977502 - MTE2a LTR MaLR -181 198 65 2 1513 183 42 0 0 chrX 121672794 121672818 -44977478 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1513 911 125 7 0 chrX 121672818 121672954 -44977342 - B1_Mm SINE Alu -9 138 2 2 1513 285 350 17 81 chrX 121672954 121673041 -44977255 - MTE2a LTR MaLR -337 82 4 2 1513 1252 277 84 20 chrX 121673109 121673452 -44976844 + ORR1D1 LTR MaLR 9 373 -1 2 1513 1938 239 77 30 chrX 121673920 121674429 -44975867 - RLTR20B3 LTR ERVK -44 533 1 2 1513 21 36 0 0 chrX 121674462 121674490 -44975806 + AT_rich Low_complexity Low_complexity 1 28 0 2 1513 246 372 47 16 chrX 121674595 121674786 -44975510 + HAL1 LINE L1 170 366 -2141 2 1513 200 211 0 0 chrX 121675220 121675258 -44975038 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 2 1513 189 0 0 0 chrX 121675402 121675423 -44974873 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1513 1583 99 7 10 chrX 121675704 121675939 -44974357 + RLTR13A LTR ERVK 1 231 -752 2 1513 32302 38 0 1 chrX 121675939 121680576 -44969720 - L1Md_T LINE L1 -43 6539 1908 2 1513 1734 94 18 36 chrX 121680576 121680852 -44969444 + RLTR13A LTR ERVK 84 354 -501 2 1513 21 71 0 0 chrX 121680876 121680918 -44969378 + AT_rich Low_complexity Low_complexity 1 42 0 2 1513 270 178 0 0 chrX 121681049 121681094 -44969202 + L1_Mur3 LINE L1 3480 3524 -2356 2 1513 297 345 11 0 chrX 121681152 121681239 -44969057 - RSINE1 SINE B4 -10 155 68 2 1513 337 293 54 54 chrX 121681243 121681427 -44968869 + L1M2 LINE L1 3738 3921 -2222 2 1513 2494 174 14 53 chrX 121681429 121682001 -44968295 - Lx2B LINE L1 -673 6300 5766 2 1513 394 0 60 15 chrX 121682002 121682069 -44968227 + (TTTTTG)n Simple_repeat Simple_repeat 3 72 0 3 1513 680 129 0 0 chrX 121682070 121682171 -44968125 - B1_Mus2 SINE Alu 0 147 47 3 1513 301 222 0 40 chrX 121682119 121682194 -44968102 - RLTR25B LTR ERVK -530 498 427 3 1513 2924 198 39 14 chrX 121682195 121682829 -44967467 - Lx2B LINE L1 -133 5753 5104 2 1513 2433 197 52 16 chrX 121682820 121683320 -44966976 + Lx2B LINE L1 6477 6994 -6 3 1513 365 337 115 73 chrX 121683421 121683463 -44966833 - MT2A LTR ERVL -1 600 546 3 1513 417 20 0 0 chrX 121683463 121683513 -44966783 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1513 902 280 105 31 chrX 121683513 121683899 -44966397 - MT2A LTR ERVL -56 545 1 3 1513 255 346 0 0 chrX 121684218 121684299 -44965997 + ORR1D2 LTR MaLR 6 86 -284 3 1513 2212 56 0 7 chrX 121684381 121684668 -44965628 + L1Md_F2 LINE L1 6298 6582 0 3 1513 5095 111 8 5 chrX 121684678 121685429 -44964867 + L1_Mm LINE L1 4951 5703 -180 3 1513 2627 139 24 24 chrX 121685425 121685748 -44964548 - Lx3_Mus LINE L1 -769 6240 5913 3 1513 216 0 0 0 chrX 121685748 121685772 -44964524 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 3 1513 2627 139 24 24 chrX 121685772 121685906 -44964390 - Lx3_Mus LINE L1 -1097 5912 5783 3 1513 525 293 58 54 chrX 121686654 121687043 -44963253 - MuLV-int LTR ERV1 -147 7459 7115 3 1513 636 138 29 25 chrX 121688540 121688685 -44961611 - RMER17D2 LTR ERVK -10 896 703 3 1513 1047 118 0 79 chrX 121688689 121688892 -44961404 - Lx3C LINE L1 -901 6075 5889 3 1513 24 53 0 0 chrX 121688974 121689012 -44961284 + AT_rich Low_complexity Low_complexity 1 38 0 3 1513 1143 263 18 21 chrX 121689111 121689391 -44960905 - ORR1B1 LTR MaLR 0 394 116 3 1513 2746 270 64 17 chrX 121689394 121690381 -44959915 + RMER1B Other Other 106 1062 -4 3 1513 354 91 0 0 chrX 121690650 121690705 -44959591 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1513 465 250 85 20 chrX 121691306 121691506 -44958790 - L1MD3 LINE L1 -10 7985 7773 3 1513 915 243 146 52 chrX 121691571 121691635 -44958661 - ORR1D2 LTR MaLR 0 394 305 3 1513 188 34 0 33 chrX 121691635 121691665 -44958631 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 3 1513 915 244 147 55 chrX 121691665 121691949 -44958347 - ORR1D2 LTR MaLR -79 315 24 3 1513 882 54 0 0 chrX 121692045 121692157 -44958139 + (TTCC)n Simple_repeat Simple_repeat 2 113 0 3 1513 518 309 37 0 chrX 121692273 121692409 -44957887 + RSINE1 SINE B4 3 143 -22 3 1513 666 58 0 0 chrX 121692433 121692520 -44957776 + (CA)n Simple_repeat Simple_repeat 1 87 0 3 1513 248 53 26 0 chrX 121692520 121692558 -44957738 + (CCA)n Simple_repeat Simple_repeat 3 41 0 3 1513 224 188 0 20 chrX 121692573 121692610 -44957686 + polypurine Low_complexity Low_complexity 1 36 0 3 1513 282 87 0 0 chrX 121692610 121692656 -44957640 + (CAGAGA)n Simple_repeat Simple_repeat 2 47 0 3 1513 224 188 0 20 chrX 121692656 121692667 -44957629 + polypurine Low_complexity Low_complexity 37 47 0 3 1513 1849 189 3 8 chrX 121692699 121693082 -44957214 - Lx2 LINE L1 -713 6284 5904 3 1513 748 182 0 7 chrX 121693082 121693237 -44957059 + Lx2 LINE L1 6844 6997 0 3 1513 1166 254 57 83 chrX 121693253 121693640 -44956656 + ORR1C2 LTR MaLR 8 384 0 3 1513 197 108 0 26 chrX 121694462 121694500 -44955796 + (CATA)n Simple_repeat Simple_repeat 4 40 0 3 1513 1011 17 0 0 chrX 121694692 121694809 -44955487 + (TTC)n Simple_repeat Simple_repeat 2 118 0 3 1513 653 68 0 0 chrX 121694809 121694897 -44955399 - B1_Mus2 SINE Alu -58 89 2 3 1513 431 325 16 24 chrX 121695130 121695253 -44955043 + B3 SINE B2 2 123 -93 3 1513 813 171 26 7 chrX 121695276 121695429 -44954867 + Lx2B LINE L1 6156 6311 -689 3 1513 1512 250 61 26 chrX 121695421 121695877 -44954419 + Lx2B LINE L1 6524 6995 -5 3 1513 22 0 0 0 chrX 121696499 121696521 -44953775 + AT_rich Low_complexity Low_complexity 1 22 0 3 1513 297 125 0 0 chrX 121696914 121696970 -44953326 + (TTTTTG)n Simple_repeat Simple_repeat 6 61 0 3 1513 329 239 0 32 chrX 121696970 121697065 -44953231 + RNLTR23 LTR ERVK 551 642 0 3 1513 564 322 98 20 chrX 121697981 121698225 -44952071 + Lx7 LINE L1 7036 7298 -398 3 1513 414 57 0 0 chrX 121698264 121698317 -44951979 + (TC)n Simple_repeat Simple_repeat 1 53 0 3 1513 511 78 22 0 chrX 121698317 121698407 -44951889 + (TG)n Simple_repeat Simple_repeat 1 92 0 3 1513 246 128 0 0 chrX 121698474 121698513 -44951783 + (GA)n Simple_repeat Simple_repeat 2 40 0 3 1513 2833 59 56 3 chrX 121698929 121699305 -44950991 - MTA_Mm LTR MaLR 0 396 1 3 1513 23 33 0 0 chrX 121700049 121700079 -44950217 + AT_rich Low_complexity Low_complexity 1 30 0 3 1513 439 244 34 75 chrX 121700158 121700304 -44949992 + Lx9 LINE L1 6962 7101 -543 3 1513 374 315 74 10 chrX 121700354 121700556 -44949740 + Lx9 LINE L1 7225 7439 -205 3 1513 405 0 0 0 chrX 121700573 121700618 -44949678 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1513 30 27 0 0 chrX 121700714 121700751 -44949545 + AT_rich Low_complexity Low_complexity 1 37 0 3 1513 949 316 32 30 chrX 121700930 121701359 -44948937 + MTE2a-int LTR MaLR 37 587 -993 3 1513 1687 313 153 39 chrX 121701372 121702123 -44948173 + MTE2a-int LTR MaLR 743 1579 -1 3 1513 737 313 35 100 chrX 121702124 121702493 -44947803 + MTE2a LTR MaLR 1 345 -34 3 1513 204 122 0 0 chrX 121702588 121702629 -44947667 + (T)n Simple_repeat Simple_repeat 1 41 0 3 1513 503 31 0 15 chrX 121702683 121702749 -44947547 + (TTA)n Simple_repeat Simple_repeat 3 67 0 3 1513 390 372 14 20 chrX 121702755 121702903 -44947393 - RSINE1 SINE B4 -15 150 4 3 1513 281 82 20 0 chrX 121702919 121702968 -44947328 + (TTTTTG)n Simple_repeat Simple_repeat 3 52 0 3 1513 783 261 36 31 chrX 121702979 121703201 -44947095 - MTD LTR MaLR -194 225 3 3 1513 638 308 19 9 chrX 121703288 121703498 -44946798 + ID_B1 SINE B4 4 215 -9 3 1513 315 0 0 0 chrX 121703828 121703863 -44946433 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1513 210 412 108 0 chrX 121703865 121703967 -44946329 - B3A SINE B2 -17 181 69 3 1513 441 239 11 0 chrX 121704195 121704283 -44946013 - ID_B1 SINE B4 -1 223 135 3 1513 21 0 0 0 chrX 121705147 121705168 -44945128 + AT_rich Low_complexity Low_complexity 1 21 0 3 1513 614 13 13 0 chrX 121705301 121705376 -44944920 + (GA)n Simple_repeat Simple_repeat 1 76 0 3 1513 440 33 0 32 chrX 121705425 121705488 -44944808 + (TTTA)n Simple_repeat Simple_repeat 1 61 0 3 1513 8209 140 22 25 chrX 121705491 121706448 -44943848 - Lx3A LINE L1 -6 6975 6038 3 1513 210 37 0 0 chrX 121706448 121706475 -44943821 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 3 1513 8209 140 35 25 chrX 121706475 121707612 -44942684 - Lx3A LINE L1 -944 6037 4849 3 1513 486 0 0 0 chrX 121707612 121707666 -44942630 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 1513 6679 140 42 25 chrX 121707666 121707853 -44942443 - Lx3A LINE L1 -1038 4848 4682 3 1513 227 283 130 65 chrX 121707854 121708054 -44942242 - RMER12 LTR ERVK -9 1313 1101 3 1513 336 111 0 0 chrX 121708289 121708352 -44941944 + (A)n Simple_repeat Simple_repeat 1 63 0 3 1513 2011 123 8 28 chrX 121708357 121708721 -44941575 - RLTR22_Mus LTR ERVK -983 825 354 3 1513 410 113 0 14 chrX 121708724 121708796 -44941500 - L1_Mm LINE L1 -2152 3731 3661 3 1513 552 146 0 0 chrX 121708801 121708897 -44941399 + L1_Mus2 LINE L1 2128 2223 -3660 3 1513 4207 93 4 0 chrX 121708897 121709457 -44940839 + IAPEY3-int LTR ERVK 1421 1982 -5698 3 1513 3302 85 11 0 chrX 121709434 121709881 -44940415 + IAPEY3-int LTR ERVK 2238 2689 -4991 3 1513 495 34 0 0 chrX 121709874 121709933 -44940363 + IAPEY3-int LTR ERVK 4852 4910 -2770 3 1513 4049 117 21 7 chrX 121709933 121710542 -44939754 + IAPEy-int LTR ERVK 6896 7513 0 3 1513 3000 45 0 0 chrX 121710542 121710899 -44939397 + IAPEY2_LTR LTR ERVK 1 357 0 3 1513 8565 108 2 3 chrX 121710900 121712844 -44937452 + L1_Mus2 LINE L1 4623 6566 0 3 1513 580 51 0 0 chrX 121712847 121712925 -44937371 - RLTR22_Mus LTR ERVK -1437 371 294 3 1513 207 100 0 0 chrX 121712925 121712955 -44937341 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 3 1513 1897 137 3 7 chrX 121713459 121713761 -44936535 - RLTR22_Mus LTR ERVK -1505 303 3 3 1513 11739 143 33 13 chrX 121713763 121714353 -44935943 - L1_Mur1 LINE L1 -1184 4702 4123 3 1513 333 0 0 0 chrX 121714353 121714390 -44935906 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1513 11739 143 33 13 chrX 121714390 121715948 -44934348 - L1_Mur1 LINE L1 -1764 4122 2510 3 1513 1519 212 27 61 chrX 121715948 121716355 -44933941 - RLTR9C LTR ERVK 0 393 1 3 1513 481 92 0 26 chrX 121716359 121716437 -44933859 - ETnERV2-int LTR ERVK -4 7402 7327 3 1513 1030 199 12 58 chrX 121716647 121717233 -44933063 - ETnERV2-int LTR ERVK -1703 3141 2901 3 1513 747 110 9 14 chrX 121717242 121717371 -44932925 + IAPLTR2b LTR ERVK 1 151 -206 3 1513 4424 111 71 58 chrX 121717371 121718215 -44932081 + IAPEz-int LTR ERVK 211 995 -5486 3 1513 398 70 0 0 chrX 121718215 121718272 -44932024 + B1_Mus1 SINE Alu 1 57 -91 3 1513 1898 67 4 0 chrX 121718277 121718516 -44931780 + IAPEY3-int LTR ERVK 2258 2497 -5183 3 1513 13418 79 15 9 chrX 121718515 121720329 -44929967 + IAPEz-int LTR ERVK 4656 6481 0 3 1513 2501 57 35 0 chrX 121720329 121720643 -44929653 + IAPLTR2b LTR ERVK 1 325 -2 3 1513 3904 187 40 32 chrX 121720643 121722095 -44928201 - ETnERV2-int LTR ERVK -3321 4085 2357 3 1513 900 152 0 18 chrX 121722655 121722823 -44927473 - RLTR13D1 LTR ERVK -156 650 486 3 1513 2195 198 22 20 chrX 121722823 121723324 -44926972 - ETnERV2-int LTR ERVK -4409 2997 2496 3 1513 3724 188 29 87 chrX 121723351 121724478 -44925818 - MMETn-int LTR ERVK -3675 1169 108 3 1513 274 255 10 60 chrX 121724513 121724613 -44925683 - MMETn-int LTR ERVK -4740 104 10 3 1513 699 228 55 61 chrX 121724622 121724869 -44925427 - RLTR9E LTR ERVK -7 430 143 3 1513 3358 135 20 0 chrX 121725204 121725803 -44924493 - L1_Mur1 LINE L1 -3847 2039 1429 3 1513 226 67 22 22 chrX 121727601 121727647 -44922649 + (CAAAAA)n Simple_repeat Simple_repeat 4 49 0 3 1513 269 98 60 24 chrX 121727752 121727836 -44922460 + T-rich Low_complexity Low_complexity 3 89 0 3 1513 406 325 78 68 chrX 121727837 121728246 -44922050 - L1MD LINE L1 -2666 3480 3068 3 1513 22 70 0 0 chrX 121728779 121728822 -44921474 + AT_rich Low_complexity Low_complexity 1 43 0 3 1513 371 37 0 138 chrX 121729195 121729289 -44921007 + T-rich Low_complexity Low_complexity 1 81 0 3 1513 507 45 0 0 chrX 121729402 121729468 -44920828 + (TG)n Simple_repeat Simple_repeat 2 67 0 3 1513 192 40 0 0 chrX 121729738 121729763 -44920533 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 3 1513 191 61 0 29 chrX 121729824 121729858 -44920438 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1513 222 37 0 0 chrX 121729973 121730000 -44920296 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 3 1513 297 131 0 0 chrX 121730213 121730274 -44920022 + (T)n Simple_repeat Simple_repeat 1 61 0 3 1513 194 0 39 0 chrX 121730498 121730524 -44919772 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 3 1513 1039 102 0 0 chrX 121730524 121730671 -44919625 - B1_Mus1 SINE Alu 0 148 2 3 1513 211 159 0 104 chrX 121730752 121730829 -44919467 + A-rich Low_complexity Low_complexity 3 71 0 3 1513 225 146 0 0 chrX 121730986 121731034 -44919262 + (T)n Simple_repeat Simple_repeat 1 48 0 3 1513 1155 48 7 0 chrX 121731036 121731181 -44919115 - B1_Mus2 SINE Alu 0 147 2 3 1513 27 49 0 0 chrX 121731398 121731439 -44918857 + AT_rich Low_complexity Low_complexity 1 41 0 3 1513 204 40 0 0 chrX 121732303 121732328 -44917968 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 3 1513 1058 77 14 0 chrX 121732328 121732471 -44917825 - B1_Mus1 SINE Alu -2 146 2 3 1513 22 0 0 0 chrX 121732506 121732528 -44917768 + AT_rich Low_complexity Low_complexity 1 22 0 4 1513 207 0 0 0 chrX 121732576 121732599 -44917697 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1513 380 20 0 20 chrX 121732640 121732690 -44917606 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 4 1513 951 63 0 0 chrX 121732690 121732816 -44917480 - B1_Mus2 SINE Alu -10 137 12 4 1513 200 254 26 26 chrX 121732852 121732965 -44917331 + A-rich Low_complexity Low_complexity 2 114 0 4 1513 249 33 0 0 chrX 121733045 121733075 -44917221 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 4 1513 198 67 43 22 chrX 121733176 121733222 -44917074 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 4 1513 195 114 0 0 chrX 121733455 121733490 -44916806 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 4 1513 219 69 0 0 chrX 121733525 121733554 -44916742 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1513 225 0 0 0 chrX 121733869 121733894 -44916402 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 4 1513 250 257 0 87 chrX 121733984 121734180 -44916116 + T-rich Low_complexity Low_complexity 2 180 0 4 1513 303 270 54 90 chrX 121734693 121734860 -44915436 - L1MDa LINE L1 -4132 2501 2341 4 1513 21 36 0 0 chrX 121735042 121735070 -44915226 + AT_rich Low_complexity Low_complexity 1 28 0 4 1513 288 0 0 0 chrX 121735302 121735334 -44914962 + (T)n Simple_repeat Simple_repeat 1 32 0 4 1513 234 184 0 0 chrX 121735374 121735423 -44914873 + T-rich Low_complexity Low_complexity 1 49 0 4 1513 23 68 0 0 chrX 121735607 121735651 -44914645 + AT_rich Low_complexity Low_complexity 1 44 0 4 1513 23 0 0 0 chrX 121735790 121735813 -44914483 + AT_rich Low_complexity Low_complexity 1 23 0 4 1513 21 0 0 0 chrX 121735835 121735856 -44914440 + AT_rich Low_complexity Low_complexity 1 21 0 4 1513 23 97 0 0 chrX 121735995 121736067 -44914229 + AT_rich Low_complexity Low_complexity 1 72 0 4 1513 261 57 0 0 chrX 121736157 121736192 -44914104 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1513 360 0 0 0 chrX 121736336 121736376 -44913920 + (TAA)n Simple_repeat Simple_repeat 1 40 0 4 1513 276 244 23 41 chrX 121736987 121737158 -44913138 + (TATAA)n Simple_repeat Simple_repeat 3 170 0 4 1513 770 153 20 46 chrX 121737305 121737456 -44912840 - B1_Mus1 SINE Alu 0 148 2 4 1513 1280 73 6 0 chrX 121737639 121737816 -44912480 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 4 1513 435 342 60 15 chrX 121737816 121738083 -44912213 - L1MC4 LINE L1 -4997 1218 940 4 1513 891 122 14 7 chrX 121738084 121738224 -44912072 - B1_Mus1 SINE Alu -6 142 2 4 1513 235 225 0 14 chrX 121738230 121738302 -44911994 + A-rich Low_complexity Low_complexity 3 73 0 4 1513 425 243 162 26 chrX 121738547 121738775 -44911521 - L1MC4 LINE L1 -5017 1198 940 4 1513 891 122 14 7 chrX 121738776 121738916 -44911380 - B1_Mus1 SINE Alu -6 142 2 4 1513 226 281 6 57 chrX 121738922 121739099 -44911197 + A-rich Low_complexity Low_complexity 3 170 0 4 1513 773 176 6 17 chrX 121739239 121739418 -44910878 + CT-rich Low_complexity Low_complexity 2 178 0 4 1513 789 185 7 0 chrX 121739420 121739566 -44910730 - B1_Mus1 SINE Alu 0 148 2 4 1513 24 0 0 0 chrX 121739600 121739624 -44910672 + AT_rich Low_complexity Low_complexity 1 24 0 4 1513 255 130 0 0 chrX 121739676 121739730 -44910566 + (A)n Simple_repeat Simple_repeat 1 54 0 4 1513 198 91 0 0 chrX 121739782 121739815 -44910481 + (A)n Simple_repeat Simple_repeat 1 33 0 4 1513 320 70 27 40 chrX 121739963 121740038 -44910258 + (TTTTG)n Simple_repeat Simple_repeat 1 74 0 4 1513 841 170 0 0 chrX 121740040 121740181 -44910115 - B1_Mus1 SINE Alu -6 142 2 4 1513 384 235 12 40 chrX 121740196 121740369 -44909927 + A-rich Low_complexity Low_complexity 1 168 0 4 1513 238 26 51 0 chrX 121740385 121740424 -44909872 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 4 1513 23 0 0 0 chrX 121740469 121740492 -44909804 + AT_rich Low_complexity Low_complexity 1 23 0 4 1513 724 55 18 18 chrX 121740524 121740634 -44909662 + (TTTC)n Simple_repeat Simple_repeat 2 111 0 4 1513 793 175 7 0 chrX 121740647 121740784 -44909512 - B1_Mus1 SINE Alu -8 140 3 4 1513 755 144 0 7 chrX 121741112 121741252 -44909044 + CT-rich Low_complexity Low_complexity 2 140 0 4 1513 864 129 14 0 chrX 121741255 121741394 -44908902 - B1_Mus1 SINE Alu -6 142 2 4 1513 28 0 0 0 chrX 121741487 121741515 -44908781 + AT_rich Low_complexity Low_complexity 1 28 0 4 1513 198 0 0 0 chrX 121741607 121741629 -44908667 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 4 1513 216 0 0 0 chrX 121741685 121741709 -44908587 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1513 910 132 0 12 chrX 121741772 121741933 -44908363 + (TTTC)n Simple_repeat Simple_repeat 3 161 0 4 1513 790 168 14 0 chrX 121741933 121742076 -44908220 - B1_Mus1 SINE Alu 0 148 4 4 1513 206 232 0 0 chrX 121742114 121742170 -44908126 + A-rich Low_complexity Low_complexity 1 56 0 4 1513 270 293 0 0 chrX 121744513 121744595 -44905701 - MurSAT1 Satellite Satellite -38 82 1 4 1513 232 330 5 5 chrX 121745092 121745235 -44905061 - MurSAT1 Satellite Satellite -2 143 1 4 1513 267 282 6 6 chrX 121745640 121745749 -44904547 - MurSAT1 Satellite Satellite -10 109 1 4 1513 257 357 0 0 chrX 121746186 121746284 -44904012 - MurSAT1 Satellite Satellite -22 98 1 4 1513 345 285 23 23 chrX 121746525 121746812 -44903484 - MurSAT1 Satellite Satellite -1 287 1 4 1513 255 336 0 0 chrX 121747216 121747325 -44902971 - MurSAT1 Satellite Satellite -4 116 1 4 1513 250 319 9 9 chrX 121747950 121748064 -44902232 - MurSAT1 Satellite Satellite -1 119 6 4 1513 287 315 11 11 chrX 121748100 121748230 -44902066 - MurSAT1 Satellite Satellite -1 130 1 4 1513 245 163 0 0 chrX 121748553 121748596 -44901700 - MurSAT1 Satellite Satellite -28 92 50 4 1513 245 163 0 0 chrX 121748934 121748977 -44901319 - MurSAT1 Satellite Satellite -28 92 50 4 1513 263 272 24 24 chrX 121749696 121749779 -44900517 - MurSAT1 Satellite Satellite -28 92 10 4 1513 256 326 16 5 chrX 121751258 121751429 -44898867 - MurSAT1 Satellite Satellite -27 172 1 4 1513 266 330 0 0 chrX 121751899 121751996 -44898300 - MurSAT1 Satellite Satellite -23 97 1 4 1513 287 281 41 10 chrX 121752395 121752492 -44897804 - MurSAT1 Satellite Satellite -14 106 7 4 1513 296 313 15 5 chrX 121753556 121753732 -44896564 - MurSAT1 Satellite Satellite -27 177 1 4 1513 259 306 10 10 chrX 121754195 121754294 -44896002 - MurSAT1 Satellite Satellite -21 99 1 4 1513 277 262 35 12 chrX 121754705 121754790 -44895506 - MurSAT1 Satellite Satellite -27 93 7 4 1513 244 312 10 10 chrX 121755346 121755443 -44894853 - MurSAT1 Satellite Satellite -23 97 1 4 1513 281 313 15 5 chrX 121755854 121756030 -44894266 - MurSAT1 Satellite Satellite -27 177 1 4 1513 296 308 15 5 chrX 121757003 121757179 -44893117 - MurSAT1 Satellite Satellite -27 177 1 4 1513 253 302 10 10 chrX 121757644 121757741 -44892555 - MurSAT1 Satellite Satellite -23 97 1 4 1513 296 316 16 5 chrX 121758157 121758328 -44891968 - MurSAT1 Satellite Satellite -32 172 1 4 1513 225 307 11 11 chrX 121758793 121758882 -44891414 - MurSAT1 Satellite Satellite -23 97 9 4 1513 284 313 15 5 chrX 121759301 121759477 -44890819 - MurSAT1 Satellite Satellite -27 177 1 4 1513 284 323 15 5 chrX 121760450 121760626 -44889670 - MurSAT1 Satellite Satellite -27 177 1 4 1513 269 323 26 13 chrX 121761619 121761794 -44888502 - MurSAT1 Satellite Satellite -2 177 1 4 1513 338 289 0 0 chrX 121762249 121762346 -44887950 - MurSAT1 Satellite Satellite -23 97 1 4 1513 286 295 10 5 chrX 121762677 121762820 -44887476 - MurSAT1 Satellite Satellite -21 143 1 4 1513 320 325 11 11 chrX 121763022 121763226 -44887070 - MurSAT1 Satellite Satellite -1 204 1 4 1513 228 315 35 35 chrX 121763266 121763381 -44886915 - MurSAT1 Satellite Satellite -5 115 1 4 1513 256 326 9 9 chrX 121763788 121763920 -44886376 - MurSAT1 Satellite Satellite -11 132 1 4 1514 265 24 23 23 chrX 121770027 121770070 -44880226 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 4 1514 2942 118 7 0 chrX 121770241 121770674 -44879622 + L1_Mus3 LINE L1 6197 6632 -6 4 1514 1317 34 6 22 chrX 121771425 121771606 -44878690 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 4 1514 668 119 0 9 chrX 121771607 121771717 -44878579 + (TTCC)n Simple_repeat Simple_repeat 1 109 0 4 1514 592 162 210 19 chrX 121771717 121771874 -44878422 - B2_Mm2 SINE B2 -8 187 1 4 1514 233 277 20 10 chrX 121776441 121776467 -44873829 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 4 1514 481 105 10 10 chrX 121776467 121776563 -44873733 + (TATG)n Simple_repeat Simple_repeat 1 96 0 4 1514 252 239 0 14 chrX 121776563 121776638 -44873658 + CT-rich Low_complexity Low_complexity 1 73 0 4 1514 536 246 59 18 chrX 121776673 121776843 -44873453 + ORR1B2 LTR MaLR 1 177 -190 4 1514 2028 211 57 76 chrX 121776908 121776981 -44873315 - RLTR21 LTR ERVK -368 1204 1131 4 1514 336 24 0 0 chrX 121776981 121777022 -44873274 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1514 2028 211 57 76 chrX 121777022 121777616 -44872680 - RLTR21 LTR ERVK -442 1130 550 4 1514 1319 221 20 78 chrX 121777654 121777998 -44872298 - RLTR21 LTR ERVK -1248 324 1 4 1514 271 295 0 18 chrX 121778366 121778480 -44871816 - Lx6 LINE L1 -17 7443 7332 4 1514 359 320 41 50 chrX 121778492 121778712 -44871584 - Lx6 LINE L1 -1338 6122 5905 4 1514 2076 197 24 31 chrX 121778718 121778901 -44871395 - MTC LTR MaLR 0 421 238 4 1514 6314 106 6 1 chrX 121778901 121779790 -44870506 + RLTR13B1 LTR ERVK 1 893 0 4 1514 2076 197 24 31 chrX 121779790 121780030 -44870266 - MTC LTR MaLR -184 237 1 4 1514 906 241 39 49 chrX 121780033 121780317 -44869979 - Lx7 LINE L1 -1796 5900 5620 4 1514 933 212 41 31 chrX 121780337 121780629 -44869667 - L1_Mur3 LINE L1 -2593 3287 2993 4 1514 6185 108 3 2 chrX 121780634 121781526 -44868770 - L1_Mus2 LINE L1 0 6566 5674 4 1514 3631 34 2 0 chrX 121781527 121782001 -44868295 - L1Md_F3 LINE L1 -562 6022 5548 4 1514 4320 60 0 2 chrX 121782001 121782551 -44867745 + L1Md_F3 LINE L1 6034 6582 -2 4 1514 817 186 7 0 chrX 121782554 121782694 -44867602 - L1_Mm LINE L1 -198 5685 5545 4 1514 5009 96 15 12 chrX 121782723 121784119 -44866177 + L1Md_F LINE L1 505 1904 -3979 4 1514 501 315 20 10 chrX 121784523 121784722 -44865574 - Lx8 LINE L1 -941 6532 6332 4 1514 399 301 47 23 chrX 121785066 121785343 -44864953 - Lx8 LINE L1 -175 5672 5401 4 1514 2913 254 44 15 chrX 121785352 121786104 -44864192 + ORR1D-int LTR MaLR 455 1228 -142 4 1514 408 158 73 0 chrX 121786226 121786308 -44863988 + MERVL_2A-int LTR ERVL 5674 5761 0 5 1514 261 292 26 17 chrX 121786308 121786351 -44863945 + Ricksha_c DNA MuDR 347 390 -1658 5 1514 253 302 10 10 chrX 121836817 121836914 -44813382 + MurSAT1 Satellite Satellite 1 97 -23 5 1514 296 308 15 5 chrX 121837379 121837555 -44812741 + MurSAT1 Satellite Satellite 1 177 -2 5 1514 281 313 15 5 chrX 121838528 121838704 -44811592 + MurSAT1 Satellite Satellite 1 177 -2 5 1514 244 312 10 10 chrX 121839115 121839212 -44811084 + MurSAT1 Satellite Satellite 1 97 -23 5 1514 277 262 35 12 chrX 121839768 121839853 -44810443 + MurSAT1 Satellite Satellite 7 93 -27 5 1514 259 306 10 10 chrX 121840264 121840363 -44809933 + MurSAT1 Satellite Satellite 1 99 -21 5 1514 296 313 15 5 chrX 121840826 121841002 -44809294 + MurSAT1 Satellite Satellite 1 177 -2 5 1514 287 281 41 10 chrX 121842066 121842163 -44808133 + MurSAT1 Satellite Satellite 7 106 -14 5 1514 266 330 0 0 chrX 121842562 121842659 -44807637 + MurSAT1 Satellite Satellite 1 97 -23 5 1514 256 326 16 5 chrX 121843129 121843300 -44806996 + MurSAT1 Satellite Satellite 1 172 -2 5 1514 263 272 24 24 chrX 121844779 121844862 -44805434 + MurSAT1 Satellite Satellite 10 92 -28 5 1514 245 163 0 0 chrX 121845581 121845624 -44804672 + MurSAT1 Satellite Satellite 50 92 -28 5 1514 245 163 0 0 chrX 121845962 121846005 -44804291 + MurSAT1 Satellite Satellite 50 92 -28 5 1514 287 315 11 11 chrX 121846328 121846458 -44803838 + MurSAT1 Satellite Satellite 1 130 -1 5 1514 250 319 9 9 chrX 121846494 121846608 -44803688 + MurSAT1 Satellite Satellite 6 119 -1 5 1514 255 336 0 0 chrX 121847233 121847342 -44802954 + MurSAT1 Satellite Satellite 1 116 -4 5 1514 345 287 22 22 chrX 121847746 121848033 -44802263 + MurSAT1 Satellite Satellite 1 287 -1 5 1514 257 357 0 0 chrX 121848274 121848372 -44801924 + MurSAT1 Satellite Satellite 1 98 -22 5 1514 267 282 6 6 chrX 121848809 121848918 -44801378 + MurSAT1 Satellite Satellite 1 109 0 5 1514 232 330 5 5 chrX 121849323 121849466 -44800830 + MurSAT1 Satellite Satellite 1 143 -2 5 1514 270 293 0 0 chrX 121849963 121850045 -44800251 + MurSAT1 Satellite Satellite 1 82 -38 5 1514 206 232 0 0 chrX 121852475 121852531 -44797765 + T-rich Low_complexity Low_complexity 1 56 0 5 1514 790 168 14 0 chrX 121852569 121852712 -44797584 + B1_Mus1 SINE Alu 4 148 0 5 1514 902 141 0 6 chrX 121852712 121852869 -44797427 + (GAAA)n Simple_repeat Simple_repeat 2 157 0 5 1514 216 0 0 0 chrX 121852932 121852956 -44797340 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1514 198 0 0 0 chrX 121853012 121853034 -44797262 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 5 1514 28 0 0 0 chrX 121853126 121853154 -44797142 + AT_rich Low_complexity Low_complexity 1 28 0 5 1514 864 129 14 0 chrX 121853247 121853386 -44796910 + B1_Mus1 SINE Alu 2 142 -6 5 1514 712 134 7 7 chrX 121853390 121853525 -44796771 + (GAAA)n Simple_repeat Simple_repeat 2 136 0 5 1514 793 175 7 0 chrX 121853853 121853990 -44796306 + B1_Mus1 SINE Alu 3 140 -8 5 1514 730 55 36 0 chrX 121854003 121854113 -44796183 + (GAAA)n Simple_repeat Simple_repeat 2 115 0 5 1514 23 0 0 0 chrX 121854145 121854168 -44796128 + AT_rich Low_complexity Low_complexity 1 23 0 5 1514 254 50 25 0 chrX 121854213 121854253 -44796043 + (TTTTTG)n Simple_repeat Simple_repeat 3 43 0 5 1514 384 235 12 40 chrX 121854269 121854442 -44795854 + T-rich Low_complexity Low_complexity 1 168 0 5 1514 841 170 0 0 chrX 121854457 121854598 -44795698 + B1_Mus1 SINE Alu 2 142 -6 5 1514 320 70 27 40 chrX 121854600 121854675 -44795621 + (CAAAA)n Simple_repeat Simple_repeat 1 74 0 5 1514 198 91 0 0 chrX 121854823 121854856 -44795440 + (T)n Simple_repeat Simple_repeat 1 33 0 5 1514 255 130 0 0 chrX 121854908 121854962 -44795334 + (T)n Simple_repeat Simple_repeat 1 54 0 5 1514 24 0 0 0 chrX 121855014 121855038 -44795258 + AT_rich Low_complexity Low_complexity 1 24 0 5 1514 789 185 7 0 chrX 121855072 121855218 -44795078 + B1_Mus1 SINE Alu 2 148 0 5 1514 773 176 6 17 chrX 121855220 121855399 -44794897 + GA-rich Low_complexity Low_complexity 2 178 0 5 1514 226 281 6 57 chrX 121855539 121855716 -44794580 + T-rich Low_complexity Low_complexity 3 170 0 5 1514 891 122 14 7 chrX 121855722 121855862 -44794434 + B1_Mus1 SINE Alu 2 142 -6 5 1514 316 114 0 0 chrX 121855864 121855925 -44794371 + (A)n Simple_repeat Simple_repeat 1 61 0 5 1514 735 182 6 12 chrX 121855933 121856100 -44794196 + GA-rich Low_complexity Low_complexity 3 168 0 5 1514 235 225 0 14 chrX 121856338 121856410 -44793886 + T-rich Low_complexity Low_complexity 3 73 0 5 1514 891 122 14 7 chrX 121856416 121856556 -44793740 + B1_Mus1 SINE Alu 2 142 -6 5 1514 458 321 86 15 chrX 121856557 121856826 -44793470 + L1MC4 LINE L1 940 1227 -4988 5 1514 1280 73 6 0 chrX 121856826 121857003 -44793293 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 5 1514 770 153 20 46 chrX 121857186 121857337 -44792959 + B1_Mus1 SINE Alu 2 148 0 5 1514 276 244 23 41 chrX 121857484 121857655 -44792641 + (TTATA)n Simple_repeat Simple_repeat 3 170 0 5 1514 360 0 0 0 chrX 121858266 121858306 -44791990 + (TTA)n Simple_repeat Simple_repeat 1 40 0 5 1514 261 57 0 0 chrX 121858450 121858485 -44791811 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1514 23 97 0 0 chrX 121858575 121858647 -44791649 + AT_rich Low_complexity Low_complexity 1 72 0 5 1514 21 0 0 0 chrX 121858786 121858807 -44791489 + AT_rich Low_complexity Low_complexity 1 21 0 5 1514 23 0 0 0 chrX 121858829 121858852 -44791444 + AT_rich Low_complexity Low_complexity 1 23 0 5 1514 23 68 0 0 chrX 121858991 121859035 -44791261 + AT_rich Low_complexity Low_complexity 1 44 0 5 1514 234 184 0 0 chrX 121859219 121859268 -44791028 + A-rich Low_complexity Low_complexity 1 49 0 5 1514 297 0 0 0 chrX 121859308 121859341 -44790955 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1514 21 36 0 0 chrX 121859573 121859601 -44790695 + AT_rich Low_complexity Low_complexity 1 28 0 5 1514 303 270 54 90 chrX 121859783 121859950 -44790346 + L1MDa LINE L1 2341 2501 -4132 5 1514 250 257 0 87 chrX 121860463 121860659 -44789637 + A-rich Low_complexity Low_complexity 2 180 0 5 1514 225 0 0 0 chrX 121860749 121860774 -44789522 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 5 1514 219 69 0 0 chrX 121861089 121861118 -44789178 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1514 195 114 0 0 chrX 121861153 121861188 -44789108 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 5 1514 198 67 43 22 chrX 121861421 121861467 -44788829 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 5 1514 249 33 0 0 chrX 121861568 121861598 -44788698 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 5 1514 200 254 26 26 chrX 121861678 121861791 -44788505 + T-rich Low_complexity Low_complexity 2 114 0 5 1514 951 63 0 0 chrX 121861827 121861953 -44788343 + B1_Mus2 SINE Alu 12 137 -10 5 1514 380 20 0 20 chrX 121861953 121862003 -44788293 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 5 1514 207 0 0 0 chrX 121862044 121862067 -44788229 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 5 1514 22 0 0 0 chrX 121862115 121862137 -44788159 + AT_rich Low_complexity Low_complexity 1 22 0 5 1514 1058 77 14 0 chrX 121862172 121862315 -44787981 + B1_Mus1 SINE Alu 2 146 -2 5 1514 204 40 0 0 chrX 121862315 121862340 -44787956 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 5 1514 27 49 0 0 chrX 121863205 121863246 -44787050 + AT_rich Low_complexity Low_complexity 1 41 0 5 1514 1155 48 7 0 chrX 121863463 121863608 -44786688 + B1_Mus2 SINE Alu 2 147 0 5 1514 225 146 0 0 chrX 121863610 121863658 -44786638 + (A)n Simple_repeat Simple_repeat 1 48 0 5 1514 211 159 0 104 chrX 121863815 121863892 -44786404 + T-rich Low_complexity Low_complexity 3 71 0 5 1514 1039 102 0 0 chrX 121863973 121864120 -44786176 + B1_Mus1 SINE Alu 2 148 0 5 1514 194 0 39 0 chrX 121864120 121864146 -44786150 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 5 1514 363 98 0 0 chrX 121864370 121864431 -44785865 + (A)n Simple_repeat Simple_repeat 1 61 0 5 1514 222 37 0 0 chrX 121864644 121864671 -44785625 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 5 1514 191 61 0 29 chrX 121864786 121864820 -44785476 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 1514 192 40 0 0 chrX 121864881 121864906 -44785390 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 5 1514 507 45 0 0 chrX 121865176 121865242 -44785054 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 1514 353 38 0 141 chrX 121865355 121865447 -44784849 + A-rich Low_complexity Low_complexity 1 79 0 5 1514 22 70 0 0 chrX 121865820 121865863 -44784433 + AT_rich Low_complexity Low_complexity 1 43 0 5 1514 400 325 78 71 chrX 121866396 121866806 -44783490 + L1MD LINE L1 3068 3480 -2666 5 1514 269 98 60 24 chrX 121866807 121866891 -44783405 + A-rich Low_complexity Low_complexity 3 89 0 5 1514 226 67 22 22 chrX 121866996 121867042 -44783254 + (TTTTTG)n Simple_repeat Simple_repeat 4 49 0 5 1514 3358 135 20 0 chrX 121868841 121869440 -44780856 + L1_Mur1 LINE L1 1429 2039 -3847 5 1514 699 227 39 70 chrX 121869775 121870022 -44780274 + RLTR9E LTR ERVK 143 430 -7 5 1514 3845 193 27 108 chrX 121870031 121871293 -44779003 + MMETn-int LTR ERVK 10 1169 -3675 5 1514 2195 198 22 20 chrX 121871320 121871821 -44778475 + ETnERV2-int LTR ERVK 2496 2997 -4409 5 1514 900 152 0 18 chrX 121871821 121871989 -44778307 + RLTR13D1 LTR ERVK 486 650 -156 5 1514 3708 182 38 32 chrX 121872549 121874001 -44776295 + ETnERV2-int LTR ERVK 2357 4085 -3321 5 1514 2524 57 35 0 chrX 121874001 121874315 -44775981 - IAPLTR2b LTR ERVK -2 325 1 5 1514 12739 79 15 9 chrX 121874315 121876129 -44774167 - IAPEz-int LTR ERVK 0 6481 4656 5 1514 1807 67 4 0 chrX 121876128 121876367 -44773929 - IAPEY3-int LTR ERVK -5183 2497 2258 5 1514 408 70 0 0 chrX 121876372 121876429 -44773867 - B1_Mus1 SINE Alu -91 57 1 5 1514 4168 110 68 55 chrX 121876429 121877273 -44773023 - IAPEz-int LTR ERVK -5486 995 211 5 1514 755 110 9 14 chrX 121877273 121877402 -44772894 - IAPLTR2b LTR ERVK -206 151 1 5 1514 953 224 13 53 chrX 121877411 121877997 -44772299 + MMETn-int LTR ERVK 2901 3722 -1122 5 1514 456 92 0 26 chrX 121878207 121878285 -44772011 + MMETn-int LTR ERVK 7327 7402 -4 5 1514 1530 197 54 88 chrX 121878289 121878696 -44771600 + RLTR9C LTR ERVK 1 393 0 5 1514 11085 143 33 12 chrX 121878696 121880254 -44770042 + L1_Mur1 LINE L1 2510 4122 -1764 5 1514 333 0 0 0 chrX 121880254 121880291 -44770005 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1514 11085 143 33 12 chrX 121880291 121880879 -44769417 + L1_Mur1 LINE L1 4123 4702 -1184 5 1514 1887 137 3 7 chrX 121880881 121881183 -44769113 + RLTR22_Mus LTR ERVK 3 303 -1505 6 1514 207 100 0 0 chrX 121881687 121881717 -44768579 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 6 1514 576 51 0 0 chrX 121881717 121881795 -44768501 + RLTR22_Mus LTR ERVK 294 371 -1437 6 1514 8129 108 2 3 chrX 121881798 121883742 -44766554 - L1_Mus2 LINE L1 0 6566 4623 6 1514 3032 45 0 0 chrX 121883743 121884100 -44766196 - IAPEY2_LTR LTR ERVK 0 357 1 6 1514 3829 117 21 7 chrX 121884100 121884709 -44765587 - IAPEy-int LTR ERVK 0 7513 6896 6 1514 475 34 0 0 chrX 121884709 121884768 -44765528 - IAPEY3-int LTR ERVK -2770 4910 4852 6 1514 3133 85 11 0 chrX 121884761 121885208 -44765088 - IAPEY3-int LTR ERVK -4991 2689 2238 6 1514 4001 93 4 0 chrX 121885185 121885745 -44764551 - IAPEY3-int LTR ERVK -5698 1982 1421 6 1514 521 146 0 0 chrX 121885745 121885841 -44764455 - L1_Mus2 LINE L1 -3660 2223 2128 6 1514 389 113 0 14 chrX 121885846 121885918 -44764378 + L1_Mm LINE L1 3661 3731 -2152 6 1514 2005 123 8 28 chrX 121885921 121886285 -44764011 + RLTR22_Mus LTR ERVK 354 825 -983 6 1514 327 113 0 0 chrX 121886290 121886352 -44763944 + (T)n Simple_repeat Simple_repeat 1 62 0 6 1514 238 283 130 65 chrX 121886587 121886787 -44763509 + RMER12 LTR ERVK 1101 1313 -9 6 1514 6316 139 38 23 chrX 121886799 121886972 -44763324 + Lx3A LINE L1 4697 4847 -1039 6 1514 486 0 0 0 chrX 121886972 121887026 -44763270 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 1514 7718 139 36 23 chrX 121887026 121888163 -44762133 + Lx3A LINE L1 4848 6022 -959 6 1514 210 37 0 0 chrX 121888163 121888190 -44762106 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 6 1514 8209 140 22 25 chrX 121888190 121889147 -44761149 + Lx3A LINE L1 6023 6974 -7 6 1514 440 33 0 32 chrX 121889150 121889213 -44761083 + (TAAA)n Simple_repeat Simple_repeat 1 61 0 6 1514 308 24 24 0 chrX 121889262 121889303 -44760993 + (TC)n Simple_repeat Simple_repeat 1 42 0 6 1514 21 0 0 0 chrX 121889436 121889457 -44760839 + AT_rich Low_complexity Low_complexity 1 21 0 6 1514 441 239 11 0 chrX 121890321 121890409 -44759887 + ID_B1 SINE B4 135 223 -1 6 1514 210 412 108 0 chrX 121890637 121890739 -44759557 + B3A SINE B2 69 181 -17 6 1514 315 0 0 0 chrX 121890741 121890776 -44759520 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1514 638 308 19 9 chrX 121891106 121891316 -44758980 - ID_B1 SINE B4 -9 215 4 6 1514 783 261 36 31 chrX 121891403 121891625 -44758671 + MTD LTR MaLR 3 225 -194 6 1514 281 82 20 0 chrX 121891636 121891685 -44758611 + (CAAAAA)n Simple_repeat Simple_repeat 3 52 0 6 1514 390 372 14 20 chrX 121891701 121891849 -44758447 + RSINE1 SINE B4 4 150 -15 6 1514 530 29 0 14 chrX 121891855 121891924 -44758372 + (TAA)n Simple_repeat Simple_repeat 3 70 0 6 1514 204 122 0 0 chrX 121891978 121892019 -44758277 + (A)n Simple_repeat Simple_repeat 1 41 0 6 1514 737 313 35 100 chrX 121892114 121892483 -44757813 - MTE2a LTR MaLR -34 345 1 6 1514 1687 313 153 39 chrX 121892484 121893235 -44757061 - MTE2a-int LTR MaLR -1 1579 743 6 1514 930 319 32 30 chrX 121893248 121893677 -44756619 - MTE2a-int LTR MaLR -993 587 37 6 1514 30 27 0 0 chrX 121893856 121893893 -44756403 + AT_rich Low_complexity Low_complexity 1 37 0 6 1514 405 0 0 0 chrX 121893989 121894034 -44756262 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1514 374 315 74 10 chrX 121894051 121894253 -44756043 - Lx9 LINE L1 -205 7439 7225 6 1514 439 244 34 75 chrX 121894303 121894449 -44755847 - Lx9 LINE L1 -543 7101 6962 6 1514 23 33 0 0 chrX 121894528 121894558 -44755738 + AT_rich Low_complexity Low_complexity 1 30 0 6 1514 2820 61 56 3 chrX 121895301 121895677 -44754619 + MTA_Mm LTR MaLR 1 396 0 6 1514 246 128 0 0 chrX 121896093 121896132 -44754164 + (TC)n Simple_repeat Simple_repeat 2 40 0 6 1514 529 76 22 0 chrX 121896199 121896291 -44754005 + (CA)n Simple_repeat Simple_repeat 1 94 0 6 1514 414 57 0 0 chrX 121896291 121896344 -44753952 + (GA)n Simple_repeat Simple_repeat 1 53 0 6 1514 564 322 98 20 chrX 121896383 121896627 -44753669 - Lx7 LINE L1 -398 7298 7036 6 1515 329 239 0 32 chrX 121897543 121897638 -44752658 - RNLTR23 LTR ERVK 0 642 551 6 1515 297 125 0 0 chrX 121897638 121897694 -44752602 + (CAAAAA)n Simple_repeat Simple_repeat 6 61 0 6 1515 22 0 0 0 chrX 121898087 121898109 -44752187 + AT_rich Low_complexity Low_complexity 1 22 0 6 1515 1512 250 61 26 chrX 121898731 121899187 -44751109 - Lx2B LINE L1 -5 6995 6524 6 1515 813 171 26 7 chrX 121899179 121899332 -44750964 - Lx2B LINE L1 -689 6311 6156 6 1515 431 325 16 24 chrX 121899355 121899478 -44750818 - B3 SINE B2 -93 123 2 6 1515 653 68 0 0 chrX 121899711 121899799 -44750497 + B1_Mus2 SINE Alu 2 89 -58 6 1515 768 22 0 0 chrX 121899799 121899889 -44750407 + (GAA)n Simple_repeat Simple_repeat 2 91 0 6 1515 197 108 0 26 chrX 121900081 121900119 -44750177 + (TATG)n Simple_repeat Simple_repeat 4 40 0 6 1515 1166 254 57 83 chrX 121900941 121901328 -44748968 - ORR1C2 LTR MaLR 0 384 8 6 1515 748 182 0 7 chrX 121901344 121901499 -44748797 - Lx2 LINE L1 0 6997 6844 6 1515 1849 189 3 8 chrX 121901499 121901882 -44748414 + Lx2 LINE L1 5904 6284 -713 6 1515 224 188 0 20 chrX 121901914 121901925 -44748371 + polypyrimidine Low_complexity Low_complexity 38 48 0 6 1515 282 87 0 0 chrX 121901925 121901971 -44748325 + (TCTCTG)n Simple_repeat Simple_repeat 2 47 0 6 1515 224 188 0 20 chrX 121901971 121902008 -44748288 + polypyrimidine Low_complexity Low_complexity 2 37 0 6 1515 248 53 26 0 chrX 121902023 121902061 -44748235 + (TGG)n Simple_repeat Simple_repeat 3 41 0 6 1515 648 59 0 0 chrX 121902061 121902146 -44748150 + (TG)n Simple_repeat Simple_repeat 1 85 0 6 1515 518 309 37 0 chrX 121902170 121902306 -44747990 - RSINE1 SINE B4 -22 143 3 6 1515 918 52 0 0 chrX 121902422 121902538 -44747758 + (GGAA)n Simple_repeat Simple_repeat 2 117 0 6 1515 915 244 147 55 chrX 121902634 121902918 -44747378 + ORR1D2 LTR MaLR 24 315 -79 6 1515 188 34 0 33 chrX 121902918 121902948 -44747348 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 6 1515 915 243 146 52 chrX 121902948 121903012 -44747284 + ORR1D2 LTR MaLR 305 394 0 6 1515 465 250 85 20 chrX 121903077 121903277 -44747019 + L1MD3 LINE L1 7773 7985 -10 6 1515 258 355 91 27 chrX 121903567 121903677 -44746619 - PB1 SINE Alu -5 122 6 6 1515 246 116 0 0 chrX 121903878 121903921 -44746375 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1515 2746 272 57 20 chrX 121904191 121905178 -44745118 - RMER1B Other Other -4 1062 106 6 1515 1133 266 18 21 chrX 121905181 121905461 -44744835 + ORR1B1 LTR MaLR 116 394 0 6 1515 24 53 0 0 chrX 121905560 121905598 -44744698 + AT_rich Low_complexity Low_complexity 1 38 0 6 1515 1035 118 0 88 chrX 121905680 121905885 -44744411 + Lx3C LINE L1 5889 6075 -901 6 1515 636 138 29 25 chrX 121905889 121906034 -44744262 + RMER17D2 LTR ERVK 703 896 -10 6 1515 525 293 58 54 chrX 121907533 121907922 -44742374 + MuLV-int LTR ERV1 7115 7459 -147 6 1515 2627 139 24 24 chrX 121908666 121908800 -44741496 + Lx3_Mus LINE L1 5783 5912 -1097 6 1515 216 0 0 0 chrX 121908800 121908824 -44741472 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 6 1515 2627 139 24 24 chrX 121908824 121909147 -44741149 + Lx3_Mus LINE L1 5913 6240 -769 6 1515 5106 110 8 5 chrX 121909143 121909893 -44740403 - L1_Mm LINE L1 -180 5703 4952 6 1515 2228 60 0 0 chrX 121909910 121910195 -44740101 - L1Md_F2 LINE L1 0 6582 6298 6 1515 255 346 0 0 chrX 121910277 121910358 -44739938 - ORR1D2 LTR MaLR -284 86 6 6 1515 902 282 105 30 chrX 121910677 121911063 -44739233 + MT2A LTR ERVL 1 546 -55 6 1515 588 14 0 0 chrX 121911063 121911132 -44739164 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 1515 366 344 115 70 chrX 121911132 121911173 -44739123 + MT2A LTR ERVL 547 600 -1 6 1515 2452 195 52 16 chrX 121911274 121911774 -44738522 - Lx2B LINE L1 -6 6994 6477 6 1515 2774 200 41 15 chrX 121911765 121912373 -44737923 + Lx2B LINE L1 5104 5727 -159 6 1515 298 214 88 104 chrX 121912374 121912499 -44737797 + MT2B LTR ERVL 154 276 -325 6 1515 690 119 0 0 chrX 121912425 121912526 -44737770 + B1_Mus2 SINE Alu 47 147 0 6 1515 443 0 44 15 chrX 121912527 121912595 -44737701 + (CAAAAA)n Simple_repeat Simple_repeat 3 72 0 6 1515 2507 160 14 49 chrX 121912657 121913164 -44737132 + Lx2B LINE L1 5804 6292 -708 6 1515 337 293 54 54 chrX 121913171 121913355 -44736941 - L1M2 LINE L1 -2222 3921 3738 6 1515 297 345 11 0 chrX 121913359 121913446 -44736850 + RSINE1 SINE B4 68 155 -10 6 1515 270 178 0 0 chrX 121913504 121913549 -44736747 - L1_Mur3 LINE L1 -2356 3524 3480 6 1515 21 71 0 0 chrX 121913679 121913721 -44736575 + AT_rich Low_complexity Low_complexity 1 42 0 6 1515 1709 98 18 36 chrX 121913745 121914021 -44736275 - RLTR13A LTR ERVK -501 354 84 6 1515 29615 41 0 2 chrX 121914021 121917706 -44732590 + L1Md_T LINE L1 1908 5586 -297 6 1515 8367 31 0 0 chrX 121917706 121918690 -44731606 + L1Md_T LINE L1 5587 6570 -12 6 1515 1575 73 0 0 chrX 121918690 121918894 -44731402 - RLTR13A LTR ERVK -651 204 1 6 1515 216 0 0 0 chrX 121919175 121919199 -44731097 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1515 200 211 0 0 chrX 121919343 121919381 -44730915 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 6 1515 246 372 47 16 chrX 121919815 121920006 -44730290 - HAL1 LINE L1 -2141 366 170 6 1515 21 36 0 0 chrX 121920111 121920139 -44730157 + AT_rich Low_complexity Low_complexity 1 28 0 6 1515 1916 239 76 37 chrX 121920172 121920685 -44729611 + RLTR20B3 LTR ERVK 1 533 -44 6 1515 1252 277 84 20 chrX 121921153 121921496 -44728800 - ORR1D1 LTR MaLR -1 373 9 6 1515 242 159 0 0 chrX 121921567 121921611 -44728685 + MTE2a LTR MaLR 6 49 -330 6 1515 982 117 7 0 chrX 121921651 121921796 -44728500 + B1_Mm SINE Alu 2 147 0 6 1515 348 270 18 83 chrX 121921828 121921937 -44728359 + MTE2a LTR MaLR 68 169 -210 6 1515 7058 54 5 0 chrX 121921948 121922842 -44727454 + L1Md_F3 LINE L1 5673 6570 -14 6 1515 344 312 68 82 chrX 121922848 121923054 -44727242 + MTE2a LTR MaLR 167 369 -10 6 1515 779 303 8 17 chrX 121923557 121923919 -44726377 + Lx5 LINE L1 904 1262 -6466 6 1515 992 282 116 80 chrX 121923919 121924724 -44725572 + RLTR22_Mur LTR ERVK 1 802 -1046 6 1515 361 305 34 41 chrX 121924870 121925017 -44725279 + RLTR22_Mur LTR ERVK 1104 1249 -73 6 1515 7201 242 35 114 chrX 121925017 121929505 -44720791 + Lx5 LINE L1 2881 7031 -19 6 1515 546 278 29 83 chrX 121929503 121929873 -44720423 - Lx7 LINE L1 -29 7667 7318 6 1515 2210 109 16 3 chrX 121929873 121930196 -44720100 - ORR1A2 LTR MaLR 0 327 1 6 1515 546 278 29 83 chrX 121930196 121930209 -44720087 - Lx7 LINE L1 -379 7317 7305 6 1515 1857 196 12 0 chrX 121930204 121930546 -44719750 + Lx7 LINE L1 6657 7002 -694 6 1515 552 244 7 44 chrX 121930661 121930798 -44719498 - MT2A LTR ERVL -401 132 1 6 1515 433 146 73 0 chrX 121930798 121930880 -44719416 - MERVL_2A-int LTR ERVL 0 5761 5674 6 1515 2902 255 44 15 chrX 121931002 121931754 -44718542 - ORR1D-int LTR MaLR -142 1228 455 6 1515 399 301 47 23 chrX 121931763 121932040 -44718256 + Lx8 LINE L1 5401 5672 -175 6 1515 501 315 20 10 chrX 121932384 121932583 -44717713 + Lx8 LINE L1 6332 6532 -941 6 1515 5019 95 15 12 chrX 121932987 121934383 -44715913 - L1Md_F LINE L1 -3979 1904 505 6 1515 817 186 7 0 chrX 121934412 121934552 -44715744 + L1_Mm LINE L1 5545 5685 -198 7 1515 4334 58 0 2 chrX 121934555 121935105 -44715191 - L1Md_F3 LINE L1 -2 6582 6034 7 1515 3655 36 0 0 chrX 121935105 121935580 -44714716 + L1Md_F3 LINE L1 5548 6022 -562 7 1515 6176 108 3 2 chrX 121935581 121936473 -44713823 + L1_Mus2 LINE L1 5674 6566 0 7 1515 953 209 41 34 chrX 121936478 121936771 -44713525 + L1_Mur3 LINE L1 2993 3287 -2593 7 1515 856 240 35 46 chrX 121936791 121937075 -44713221 + Lx7 LINE L1 5620 5900 -1796 7 1515 2094 195 24 31 chrX 121937078 121937318 -44712978 + MTC LTR MaLR 1 236 -185 7 1515 6299 107 6 1 chrX 121937318 121938207 -44712089 - RLTR13B1 LTR ERVK 0 893 1 7 1515 2094 195 24 31 chrX 121938207 121938390 -44711906 + MTC LTR MaLR 237 421 0 7 1515 359 320 41 50 chrX 121938396 121938616 -44711680 + Lx6 LINE L1 5905 6122 -1338 7 1515 269 292 0 40 chrX 121938617 121938742 -44711554 + Lx6 LINE L1 7324 7443 -17 7 1515 1302 221 20 78 chrX 121939110 121939454 -44710842 + RLTR21 LTR ERVK 1 324 -1248 7 1515 2059 211 57 76 chrX 121939491 121940085 -44710211 + RLTR21 LTR ERVK 550 1130 -442 7 1515 336 24 0 0 chrX 121940085 121940126 -44710170 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1515 2059 211 57 76 chrX 121940126 121940199 -44710097 + RLTR21 LTR ERVK 1131 1204 -368 7 1515 526 246 59 18 chrX 121940264 121940434 -44709862 - ORR1B2 LTR MaLR -190 177 1 7 1515 252 239 0 14 chrX 121940469 121940541 -44709755 + GA-rich Low_complexity Low_complexity 1 71 0 7 1515 337 127 12 12 chrX 121940544 121940624 -44709672 + (CATA)n Simple_repeat Simple_repeat 1 80 0 7 1515 575 182 200 7 chrX 121945217 121945372 -44704924 + B2_Mm2 SINE B2 1 185 -10 7 1515 342 0 0 0 chrX 121945372 121945410 -44704886 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 7 1515 1219 68 0 14 chrX 121945411 121945633 -44704663 + (GAAA)n Simple_repeat Simple_repeat 1 219 0 7 1515 2949 116 7 0 chrX 121946379 121946812 -44703484 - L1_Mus3 LINE L1 -6 6632 6197 7 1515 310 21 21 21 chrX 121946984 121947032 -44703264 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 7 1515 232 330 9 9 chrX 121953160 121953267 -44697029 + MurSAT1 Satellite Satellite 3 109 -11 7 1515 228 315 35 35 chrX 121953674 121953789 -44696507 + MurSAT1 Satellite Satellite 1 115 -5 7 1515 320 331 8 8 chrX 121953829 121954033 -44696263 + MurSAT1 Satellite Satellite 1 204 -2 7 1515 286 295 10 5 chrX 121954235 121954378 -44695918 + MurSAT1 Satellite Satellite 1 143 -2 7 1515 338 289 0 0 chrX 121954709 121954806 -44695490 + MurSAT1 Satellite Satellite 1 97 -23 7 1515 248 291 32 16 chrX 121955305 121955436 -44694860 + MurSAT1 Satellite Satellite 1 133 -2 7 1515 274 308 15 5 chrX 121956429 121956605 -44693691 + MurSAT1 Satellite Satellite 1 177 -2 7 1515 309 308 15 5 chrX 121957578 121957754 -44692542 + MurSAT1 Satellite Satellite 1 177 -2 7 1515 284 313 15 5 chrX 121958727 121958903 -44691393 + MurSAT1 Satellite Satellite 1 177 -2 7 1515 235 337 0 0 chrX 121959316 121959411 -44690885 + MurSAT1 Satellite Satellite 3 97 -23 7 1515 293 279 36 6 chrX 121959936 121960052 -44690244 + MurSAT1 Satellite Satellite 1 119 -2 7 1515 252 330 0 0 chrX 121960463 121960560 -44689736 + MurSAT1 Satellite Satellite 1 97 -23 7 1515 243 298 35 12 chrX 121961116 121961201 -44689095 + MurSAT1 Satellite Satellite 7 93 -27 7 1515 252 330 0 0 chrX 121961612 121961709 -44688587 + MurSAT1 Satellite Satellite 1 97 -23 7 1515 243 298 35 12 chrX 121962265 121962350 -44687946 + MurSAT1 Satellite Satellite 7 93 -27 7 1515 266 286 35 12 chrX 121963414 121963499 -44686797 + MurSAT1 Satellite Satellite 7 93 -27 7 1515 258 330 0 0 chrX 121963910 121964007 -44686289 + MurSAT1 Satellite Satellite 1 97 -23 7 1515 225 284 24 24 chrX 121964978 121965061 -44685235 + MurSAT1 Satellite Satellite 10 92 -28 7 1515 245 163 0 0 chrX 121965399 121965442 -44684854 + MurSAT1 Satellite Satellite 50 92 -28 7 1515 236 186 0 0 chrX 121965780 121965823 -44684473 + MurSAT1 Satellite Satellite 50 92 -28 7 1515 281 326 11 11 chrX 121966146 121966276 -44684020 + MurSAT1 Satellite Satellite 1 130 -1 7 1515 283 301 9 9 chrX 121966312 121966426 -44683870 + MurSAT1 Satellite Satellite 6 119 -1 7 1515 275 324 0 0 chrX 121967051 121967160 -44683136 + MurSAT1 Satellite Satellite 1 116 -4 7 1515 326 309 16 16 chrX 121967564 121967851 -44682445 + MurSAT1 Satellite Satellite 1 287 -1 7 1515 246 360 0 0 chrX 121968063 121968190 -44682106 + MurSAT1 Satellite Satellite 1 127 -3 7 1515 251 288 6 6 chrX 121968627 121968736 -44681560 + MurSAT1 Satellite Satellite 1 109 0 7 1515 270 293 0 0 chrX 121969781 121969863 -44680433 + MurSAT1 Satellite Satellite 1 82 -38 7 1515 817 161 14 0 chrX 121972340 121972483 -44677813 + B1_Mus1 SINE Alu 4 148 0 7 1515 856 129 6 13 chrX 121972483 121972640 -44677656 + (GAAA)n Simple_repeat Simple_repeat 2 157 0 7 1515 198 0 0 0 chrX 121972762 121972784 -44677512 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 7 1515 28 0 0 0 chrX 121972877 121972905 -44677391 + AT_rich Low_complexity Low_complexity 1 28 0 7 1515 864 129 14 0 chrX 121972998 121973137 -44677159 + B1_Mus1 SINE Alu 2 142 -6 7 1515 746 130 0 8 chrX 121973142 121973274 -44677022 + (GAAA)n Simple_repeat Simple_repeat 2 132 0 7 1515 202 138 0 134 chrX 121973489 121973556 -44676740 + T-rich Low_complexity Low_complexity 1 58 0 7 1515 819 161 7 0 chrX 121973602 121973739 -44676557 + B1_Mus1 SINE Alu 3 140 -8 7 1515 981 92 0 0 chrX 121973759 121973901 -44676395 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 7 1515 22 0 0 0 chrX 121973933 121973955 -44676341 + AT_rich Low_complexity Low_complexity 1 22 0 7 1515 228 35 0 0 chrX 121974001 121974030 -44676266 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1515 372 230 13 45 chrX 121974052 121974207 -44676089 + T-rich Low_complexity Low_complexity 1 150 0 7 1515 818 177 0 0 chrX 121974222 121974363 -44675933 + B1_Mus1 SINE Alu 2 142 -6 7 1515 476 25 36 36 chrX 121974369 121974452 -44675844 + (CAAAA)n Simple_repeat Simple_repeat 2 84 0 7 1515 254 50 25 0 chrX 121974682 121974722 -44675574 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 7 1515 24 0 0 0 chrX 121974772 121974796 -44675500 + AT_rich Low_complexity Low_complexity 1 24 0 7 1515 805 166 7 0 chrX 121974830 121974969 -44675327 + B1_Mus1 SINE Alu 2 141 -7 7 1515 716 188 6 22 chrX 121974976 121975156 -44675140 + GA-rich Low_complexity Low_complexity 2 178 0 7 1515 230 284 11 49 chrX 121975288 121975473 -44674823 + T-rich Low_complexity Low_complexity 3 180 0 7 1515 891 122 14 7 chrX 121975479 121975619 -44674677 + B1_Mus1 SINE Alu 2 142 -6 7 1515 756 136 0 0 chrX 121975638 121975763 -44674533 + (GAA)n Simple_repeat Simple_repeat 2 126 0 7 1515 369 207 0 0 chrX 121975781 121975863 -44674433 + GA-rich Low_complexity Low_complexity 4 85 0 7 1515 1277 78 6 0 chrX 121975872 121976051 -44674245 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 7 1515 252 0 0 0 chrX 121976291 121976319 -44673977 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1515 216 0 0 0 chrX 121976317 121976341 -44673955 + (TTG)n Simple_repeat Simple_repeat 1 24 0 7 1515 789 160 20 14 chrX 121976392 121976538 -44673758 + B1_Mus1 SINE Alu 2 148 0 7 1515 225 65 0 0 chrX 121976546 121976577 -44673719 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 1515 326 153 26 77 chrX 121976720 121976876 -44673420 + (TTA)n Simple_repeat Simple_repeat 3 150 0 7 1515 609 14 0 0 chrX 121977484 121977554 -44672742 + (TTA)n Simple_repeat Simple_repeat 1 70 0 7 1515 261 109 0 0 chrX 121977697 121977743 -44672553 + (A)n Simple_repeat Simple_repeat 1 46 0 7 1515 23 97 0 0 chrX 121977833 121977905 -44672391 + AT_rich Low_complexity Low_complexity 1 72 0 7 1515 21 0 0 0 chrX 121978044 121978065 -44672231 + AT_rich Low_complexity Low_complexity 1 21 0 7 1515 23 0 0 0 chrX 121978088 121978111 -44672185 + AT_rich Low_complexity Low_complexity 1 23 0 7 1515 23 33 0 0 chrX 121978268 121978298 -44671998 + AT_rich Low_complexity Low_complexity 1 30 0 7 1515 305 359 50 46 chrX 121978802 121979021 -44671275 + L1MEc LINE L1 1262 1481 -4919 7 1515 203 136 0 78 chrX 121979122 121979186 -44671110 + A-rich Low_complexity Low_complexity 1 59 0 7 1515 216 0 0 0 chrX 121979977 121980001 -44670295 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1515 21 36 0 0 chrX 121980025 121980053 -44670243 + AT_rich Low_complexity Low_complexity 1 28 0 7 1515 216 0 0 0 chrX 121980335 121980359 -44669937 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1515 195 114 0 0 chrX 121980394 121980429 -44669867 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 7 1515 193 75 50 0 chrX 121980661 121980701 -44669595 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 7 1515 249 33 0 0 chrX 121980809 121980839 -44669457 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 7 1515 216 250 0 32 chrX 121980935 121981030 -44669266 + T-rich Low_complexity Low_complexity 5 96 0 7 1515 969 56 0 0 chrX 121981072 121981198 -44669098 + B1_Mus2 SINE Alu 12 137 -10 7 1515 404 37 0 18 chrX 121981198 121981253 -44669043 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 7 1515 207 0 0 0 chrX 121981294 121981317 -44668979 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 7 1515 204 67 0 0 chrX 121981344 121981374 -44668922 + (TTG)n Simple_repeat Simple_repeat 1 30 0 7 1515 22 0 0 0 chrX 121981374 121981396 -44668900 + AT_rich Low_complexity Low_complexity 1 22 0 7 1515 1023 98 14 0 chrX 121981431 121981574 -44668722 + B1_Mus1 SINE Alu 2 146 -2 7 1515 240 35 0 0 chrX 121981574 121981603 -44668693 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 7 1515 387 41 0 0 chrX 121982454 121982503 -44667793 + (A)n Simple_repeat Simple_repeat 1 49 0 7 1515 1132 62 7 0 chrX 121982805 121982950 -44667346 + B1_Mus2 SINE Alu 2 147 0 7 1515 204 149 0 60 chrX 121983162 121983212 -44667084 + T-rich Low_complexity Low_complexity 3 49 0 7 1515 1027 109 0 0 chrX 121983295 121983442 -44666854 + B1_Mus1 SINE Alu 2 148 0 7 1515 194 0 39 0 chrX 121983442 121983468 -44666828 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 7 1515 218 56 0 27 chrX 121983564 121983601 -44666695 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 7 1515 222 37 0 0 chrX 121983944 121983971 -44666325 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 7 1515 198 91 0 0 chrX 121984089 121984122 -44666174 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 8 1515 26 64 0 0 chrX 121984182 121984229 -44666067 + AT_rich Low_complexity Low_complexity 1 47 0 8 1515 408 55 0 0 chrX 121984478 121984533 -44665763 + (CA)n Simple_repeat Simple_repeat 2 56 0 8 1515 223 246 0 0 chrX 121984655 121984724 -44665572 + A-rich Low_complexity Low_complexity 1 69 0 8 1515 23 97 0 0 chrX 121985096 121985168 -44665128 + AT_rich Low_complexity Low_complexity 1 72 0 8 1515 331 299 77 63 chrX 121985673 121985880 -44664416 + L1MD LINE L1 3068 3277 -2869 8 1515 336 328 31 54 chrX 121985869 121986127 -44664169 + L1MEc LINE L1 1269 1520 -4880 8 1515 201 0 73 49 chrX 121986127 121986168 -44664128 + (CAAAAA)n Simple_repeat Simple_repeat 6 47 0 8 1515 223 49 0 47 chrX 121986274 121986317 -44663979 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 8 1515 3824 133 10 244 chrX 121987599 121989019 -44661277 + L1_Mur1 LINE L1 1429 2515 -3371 8 1515 1144 198 44 35 chrX 121989019 121989305 -44660991 + RLTR9C LTR ERVK 1 292 -117 8 1515 327 130 0 0 chrX 121989305 121989359 -44660937 + ETnERV2-int LTR ERVK 2944 2997 -4409 8 1515 929 139 0 18 chrX 121989359 121989527 -44660769 + RLTR13D1 LTR ERVK 486 650 -156 8 1515 3738 181 30 32 chrX 121990079 121991527 -44658769 + ETnERV2-int LTR ERVK 2357 4085 -3321 8 1515 2542 54 35 0 chrX 121991531 121991845 -44658451 - IAPLTR2b LTR ERVK -2 325 1 8 1515 12609 85 14 9 chrX 121991845 121993662 -44656634 - IAPEz-int LTR ERVK 0 6481 4656 8 1515 1768 75 4 0 chrX 121993661 121993900 -44656396 - IAPEY3-int LTR ERVK -5183 2497 2258 8 1515 398 88 0 0 chrX 121993905 121993962 -44656334 - B1_Mus1 SINE Alu -91 57 1 8 1515 4421 123 88 66 chrX 121993962 121994896 -44655400 - IAPEz-int LTR ERVK -5486 995 1 8 1515 2186 83 23 3 chrX 121994916 121995218 -44655078 - IAPLTR2b LTR ERVK -19 308 1 8 1515 1000 223 13 53 chrX 121995227 121995813 -44654483 + ETnERV2-int LTR ERVK 2901 3722 -1122 8 1515 456 92 0 26 chrX 121996023 121996101 -44654195 + ETnERV2-int LTR ERVK 7327 7402 -4 8 1515 1565 199 54 88 chrX 121996103 121996510 -44653786 + RLTR9C LTR ERVK 1 393 0 8 1515 11018 143 33 13 chrX 121996510 121998067 -44652229 + L1_Mur1 LINE L1 2510 4122 -1764 8 1515 369 0 0 0 chrX 121998067 121998108 -44652188 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 1515 11018 143 33 13 chrX 121998108 121998700 -44651596 + L1_Mur1 LINE L1 4123 4702 -1184 8 1515 1899 133 3 7 chrX 121998702 121999004 -44651292 + RLTR22_Mus LTR ERVK 3 303 -1505 8 1515 200 94 31 0 chrX 121999508 121999540 -44650756 + (GAAA)n Simple_repeat Simple_repeat 4 36 0 8 1515 576 51 0 0 chrX 121999540 121999618 -44650678 + RLTR22_Mus LTR ERVK 294 371 -1437 8 1515 2257 140 0 3 chrX 121999621 122000000 -44650296 - L1_Mus2 LINE L1 0 6566 6189 8 1515 8551 107 3 1 chrX 122000000 122001564 -44648732 - L1_Mus2 LINE L1 -378 6188 4623 1 1515 2918 56 0 0 chrX 122001565 122001922 -44648374 - IAPEY2_LTR LTR ERVK 0 357 1 2 1515 4002 116 23 7 chrX 122001922 122002530 -44647766 - IAPEy-int LTR ERVK 0 7513 6896 2 1515 495 34 0 0 chrX 122002530 122002589 -44647707 - IAPEY3-int LTR ERVK -2770 4910 4852 3 1515 3339 83 11 0 chrX 122002582 122003029 -44647267 - IAPEY3-int LTR ERVK -4991 2689 2238 3 1515 4181 96 4 0 chrX 122003006 122003566 -44646730 - IAPEY3-int LTR ERVK -5698 1982 1421 3 1515 552 146 0 0 chrX 122003566 122003662 -44646634 - L1_Mus2 LINE L1 -3660 2223 2128 1 1515 408 106 0 0 chrX 122003667 122003733 -44646563 + L1_Mm LINE L1 3661 3726 -2157 4 1515 2003 123 8 28 chrX 122003742 122004106 -44646190 + RLTR22_Mus LTR ERVK 354 825 -983 5 1515 225 0 0 0 chrX 122004111 122004136 -44646160 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1515 227 283 130 65 chrX 122004371 122004571 -44645725 + RMER12 LTR ERVK 1101 1313 -9 7 1515 8238 142 30 38 chrX 122004572 122005929 -44644367 + Lx3A LINE L1 4681 6022 -959 8 1515 210 37 0 0 chrX 122005929 122005956 -44644340 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 9 1515 8238 140 21 25 chrX 122005956 122006914 -44643382 + Lx3A LINE L1 6023 6974 -7 8 1515 269 64 43 0 chrX 122006917 122006964 -44643332 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 1 1515 650 13 13 0 chrX 122007013 122007092 -44643204 + (TC)n Simple_repeat Simple_repeat 1 80 0 1 1515 21 0 0 0 chrX 122007225 122007246 -44643050 + AT_rich Low_complexity Low_complexity 1 21 0 1 1515 426 250 11 0 chrX 122008109 122008197 -44642099 + ID_B1 SINE B4 135 223 -1 1 1515 351 0 0 0 chrX 122008523 122008562 -44641734 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1515 628 311 19 9 chrX 122008892 122009103 -44641193 - ID_B1 SINE B4 -8 216 4 1 1515 778 261 36 36 chrX 122009190 122009413 -44640883 + MTD LTR MaLR 3 225 -194 1 1515 281 82 20 0 chrX 122009424 122009473 -44640823 + (CAAAAA)n Simple_repeat Simple_repeat 3 52 0 1 1515 390 372 14 20 chrX 122009489 122009637 -44640659 + RSINE1 SINE B4 4 150 -15 1 1515 557 28 0 14 chrX 122009643 122009715 -44640581 + (TAA)n Simple_repeat Simple_repeat 3 73 0 1 1515 183 49 73 0 chrX 122009769 122009810 -44640486 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 2 1515 690 316 35 103 chrX 122009904 122010274 -44640022 - MTE2a LTR MaLR -34 345 1 2 1515 1606 316 155 39 chrX 122010275 122011025 -44639271 - MTE2a-int LTR MaLR -1 1579 743 2 1515 972 321 26 30 chrX 122011038 122011470 -44638826 - MTE2a-int LTR MaLR -993 587 37 2 1515 30 27 0 0 chrX 122011649 122011686 -44638610 + AT_rich Low_complexity Low_complexity 1 37 0 2 1515 432 0 0 0 chrX 122011784 122011832 -44638464 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1515 361 320 74 10 chrX 122011849 122012051 -44638245 - Lx9 LINE L1 -205 7439 7225 2 1515 439 244 34 75 chrX 122012101 122012247 -44638049 - Lx9 LINE L1 -543 7101 6962 2 1515 2814 67 53 3 chrX 122013099 122013476 -44636820 + MTA_Mm LTR MaLR 1 396 0 2 1515 246 128 0 0 chrX 122013893 122013932 -44636364 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 1515 391 48 32 0 chrX 122013999 122014061 -44636235 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 1515 372 43 0 0 chrX 122014061 122014106 -44636190 + (GA)n Simple_repeat Simple_repeat 2 47 0 2 1515 586 318 98 20 chrX 122014145 122014389 -44635907 - Lx7 LINE L1 -398 7298 7036 2 1515 329 239 0 32 chrX 122015306 122015401 -44634895 - RNLTR23 LTR ERVK 0 642 551 3 1515 252 111 0 0 chrX 122015406 122015451 -44634845 + (CAA)n Simple_repeat Simple_repeat 2 46 0 3 1515 22 0 0 0 chrX 122015843 122015865 -44634431 + AT_rich Low_complexity Low_complexity 1 22 0 3 1515 1571 246 61 26 chrX 122016487 122016943 -44633353 - Lx2B LINE L1 -5 6995 6524 3 1515 781 171 26 7 chrX 122016935 122017088 -44633208 - Lx2B LINE L1 -689 6311 6156 3 1515 444 317 16 24 chrX 122017111 122017234 -44633062 - B3 SINE B2 -93 123 2 3 1515 685 78 0 0 chrX 122017467 122017557 -44632739 + B1_Mm SINE Alu 2 91 -56 3 1515 195 42 0 0 chrX 122017557 122017581 -44632715 + (GAA)n Simple_repeat Simple_repeat 2 25 0 3 1515 197 108 0 26 chrX 122017776 122017814 -44632482 + (TATG)n Simple_repeat Simple_repeat 4 40 0 3 1515 1156 254 57 83 chrX 122018636 122019023 -44631273 - ORR1C2 LTR MaLR 0 384 8 3 1515 802 175 0 0 chrX 122019038 122019192 -44631104 - Lx2 LINE L1 0 6997 6844 3 1515 1833 192 3 8 chrX 122019192 122019575 -44630721 + Lx2 LINE L1 5904 6284 -713 4 1515 259 193 12 12 chrX 122019607 122019691 -44630605 + CT-rich Low_complexity Low_complexity 1 84 0 4 1515 226 50 50 0 chrX 122019711 122019751 -44630545 + (TGG)n Simple_repeat Simple_repeat 3 44 0 4 1515 468 99 0 0 chrX 122019751 122019822 -44630474 + (TG)n Simple_repeat Simple_repeat 1 71 0 4 1515 518 309 37 0 chrX 122019846 122019982 -44630314 - RSINE1 SINE B4 -22 143 3 4 1515 777 98 0 0 chrX 122020098 122020210 -44630086 + (GGAA)n Simple_repeat Simple_repeat 2 113 0 4 1515 915 244 147 55 chrX 122020306 122020590 -44629706 + ORR1D2 LTR MaLR 24 315 -79 4 1515 188 34 0 33 chrX 122020590 122020620 -44629676 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 4 1515 915 243 146 52 chrX 122020620 122020684 -44629612 + ORR1D2 LTR MaLR 305 394 0 4 1515 471 241 113 16 chrX 122020749 122020943 -44629353 + L1MD3 LINE L1 7773 7985 -10 4 1515 282 106 0 0 chrX 122021550 122021597 -44628699 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1515 2784 265 71 18 chrX 122021866 122022852 -44627444 - RMER1B Other Other -4 1062 25 5 1515 1071 267 21 21 chrX 122022855 122023134 -44627162 + ORR1B1 LTR MaLR 116 394 0 5 1515 1168 142 29 49 chrX 122023353 122023597 -44626699 + Lx3C LINE L1 5889 6127 -849 5 1515 600 126 19 0 chrX 122023597 122023700 -44626596 + RMER17D2 LTR ERVK 703 807 -2 5 1515 753 291 58 54 chrX 122025196 122025585 -44624711 + RLTR6-int LTR ERV1 7115 7640 -138 5 1515 2621 137 26 26 chrX 122026344 122026478 -44623818 + Lx3_Mus LINE L1 5783 5912 -1097 5 1515 216 0 0 0 chrX 122026478 122026502 -44623794 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 5 1515 2621 137 26 26 chrX 122026502 122026825 -44623471 + Lx3_Mus LINE L1 5913 6240 -769 5 1515 5062 113 8 5 chrX 122026821 122027571 -44622725 - L1_Mm LINE L1 -180 5703 4952 5 1515 2262 46 0 3 chrX 122027582 122027868 -44622428 - L1Md_F2 LINE L1 0 6582 6298 5 1515 277 333 0 0 chrX 122027950 122028031 -44622265 - ORR1D2 LTR MaLR -284 86 6 5 1516 901 292 93 30 chrX 122028355 122028748 -44621548 + MT2A LTR ERVL 2 556 -45 6 1516 528 16 0 0 chrX 122028748 122028809 -44621487 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 1516 456 351 91 66 chrX 122028809 122028849 -44621447 + MT2A LTR ERVL 557 601 0 6 1516 2508 197 50 16 chrX 122028951 122029452 -44620844 - Lx2B LINE L1 -6 6994 6477 6 1516 2245 184 9 15 chrX 122029443 122029900 -44620396 + L1_Mur1 LINE L1 5104 5557 -329 6 1516 6916 89 5 7 chrX 122029911 122031210 -44619086 - L1Md_F2 LINE L1 -1 6581 5288 6 1516 33840 86 2 16 chrX 122031204 122037554 -44612742 - L1Md_F2 LINE L1 0 6582 319 6 1516 485 71 0 14 chrX 122037639 122037710 -44612586 + (TG)n Simple_repeat Simple_repeat 1 70 0 6 1516 628 325 12 0 chrX 122037710 122037870 -44612426 - B3 SINE B2 -50 166 5 6 1516 350 313 90 33 chrX 122037875 122038098 -44612198 - Charlie2a DNA MER1_type -33 2828 2592 6 1516 4165 114 126 3 chrX 122038098 122038790 -44611506 + L1_Mus3 LINE L1 5858 6634 -4 6 1516 350 313 90 33 chrX 122038790 122038900 -44611396 - Charlie2a DNA MER1_type -270 2591 2476 6 1516 498 168 0 0 chrX 122039020 122039033 -44611263 + A-rich Low_complexity Low_complexity 1 13 0 7 1516 1087 88 0 7 chrX 122039033 122039181 -44611115 + B1_Mus2 SINE Alu 1 147 0 7 1516 498 168 0 0 chrX 122039181 122039268 -44611028 + A-rich Low_complexity Low_complexity 14 100 0 7 1516 314 309 123 28 chrX 122039349 122039675 -44610621 - Charlie2a DNA MER1_type -647 2214 1858 6 1516 7982 117 5 7 chrX 122039804 122041178 -44609118 + L1_Mus2 LINE L1 4652 6027 -539 7 1516 7542 57 6 5 chrX 122041178 122042135 -44608161 + RLTR13A2 LTR ERVK 1 958 0 7 1516 4972 86 6 10 chrX 122042135 122042382 -44607914 + L1_Mus2 LINE L1 6028 6269 -297 7 1516 7681 137 33 0 chrX 122042377 122043681 -44606615 - L1_Mm LINE L1 -2833 3050 1704 7 1516 22 0 0 0 chrX 122043689 122043711 -44606585 + AT_rich Low_complexity Low_complexity 1 22 0 7 1516 6223 1 0 0 chrX 122043808 122044495 -44605801 - L1Md_A LINE L1 0 6582 5896 7 1516 15949 94 12 20 chrX 122044495 122047510 -44602786 - L1Md_Gf LINE L1 -2527 3359 425 7 1516 1045 92 0 0 chrX 122047522 122047664 -44602632 - B1_Mus1 SINE Alu -5 143 2 7 1516 270 347 10 10 chrX 122048277 122048373 -44601923 - Lx7 LINE L1 -495 7201 7106 8 1516 636 217 98 12 chrX 122048380 122048543 -44601753 + RLTR28B LTR ERVL 1 177 -304 8 1516 236 236 0 18 chrX 122048710 122048766 -44601530 + RLTR28B LTR ERVL 460 514 -10 8 1516 1878 277 132 32 chrX 122049225 122050101 -44600195 + Lx7 LINE L1 6733 7696 0 8 1516 26 30 0 0 chrX 122050105 122050138 -44600158 + AT_rich Low_complexity Low_complexity 1 33 0 8 1516 258 372 64 0 chrX 122050146 122050224 -44600072 - ID4_ SINE ID 0 83 1 8 1516 971 121 7 0 chrX 122050606 122050746 -44599550 + B1_Mm SINE Alu 1 141 -6 8 1516 200 100 25 0 chrX 122050747 122050787 -44599509 + (CAA)n Simple_repeat Simple_repeat 2 42 0 8 1516 283 305 61 30 chrX 122051073 122051205 -44599091 + B3 SINE B2 81 216 0 8 1516 350 324 9 0 chrX 122051372 122051483 -44598813 - ID_B1 SINE B4 -3 221 110 8 1516 501 32 0 0 chrX 122051573 122051636 -44598660 + (TG)n Simple_repeat Simple_repeat 2 64 0 8 1516 26 74 0 0 chrX 122052037 122052091 -44598205 + AT_rich Low_complexity Low_complexity 1 54 0 9 1516 32 0 0 0 chrX 122052490 122052522 -44597774 + AT_rich Low_complexity Low_complexity 1 32 0 9 1516 372 22 0 0 chrX 122053043 122053088 -44597208 + (TTA)n Simple_repeat Simple_repeat 3 47 0 9 1516 25 65 0 0 chrX 122053310 122053356 -44596940 + AT_rich Low_complexity Low_complexity 1 46 0 9 1516 204 97 0 0 chrX 122053653 122053684 -44596612 + (T)n Simple_repeat Simple_repeat 1 31 0 9 1516 919 126 28 0 chrX 122053685 122053828 -44596468 - B1_Mus1 SINE Alu 0 148 2 9 1516 2118 325 49 47 chrX 122054374 122057500 -44592796 - RNERVK23-int LTR ERVK -1361 6045 2242 9 1516 273 291 143 32 chrX 122057620 122057872 -44592424 - RLTR45-int LTR ERVK -5835 2382 2103 9 1516 486 312 10 81 chrX 122057944 122058153 -44592143 - RLTR45-int LTR ERVK -6358 886 693 9 1516 629 203 0 0 chrX 122058515 122058638 -44591658 - RLTR45-int LTR ERVK -6553 691 569 9 1516 180 337 85 21 chrX 122059523 122059617 -44590679 - L2 LINE L2 -505 2914 2815 9 1516 1474 264 44 22 chrX 122059617 122060067 -44590229 - RLTR45-int LTR ERVK -6782 462 3 9 1516 565 267 56 42 chrX 122060069 122060284 -44590012 - RLTR45 LTR ERVK 0 482 265 9 1516 195 69 0 0 chrX 122060653 122060682 -44589614 + (TTG)n Simple_repeat Simple_repeat 2 30 0 9 1516 186 43 0 0 chrX 122060682 122060704 -44589592 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1 1516 917 141 0 0 chrX 122060707 122060849 -44589447 - B1_Mus2 SINE Alu -4 143 2 1 1516 205 237 0 38 chrX 122060992 122061071 -44589225 + A-rich Low_complexity Low_complexity 2 77 0 1 1516 24 32 0 0 chrX 122061120 122061151 -44589145 + AT_rich Low_complexity Low_complexity 1 31 0 1 1516 762 181 0 0 chrX 122061279 122061428 -44588868 + T-rich Low_complexity Low_complexity 1 149 0 1 1516 221 127 291 0 chrX 122061430 122061485 -44588811 - B1_Mus2 SINE Alu 0 147 77 1 1516 426 151 0 0 chrX 122061485 122061558 -44588738 + T-rich Low_complexity Low_complexity 1 73 0 1 1516 647 167 114 0 chrX 122061559 122061691 -44588605 - B1_Mus1 SINE Alu 0 148 2 1 1516 1036 110 7 0 chrX 122061723 122061868 -44588428 + B1_Mus2 SINE Alu 2 147 0 1 1516 243 0 0 0 chrX 122062018 122062045 -44588251 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1516 908 110 13 27 chrX 122062254 122062403 -44587893 - B1_Mus1 SINE Alu 0 148 2 1 1516 211 108 0 97 chrX 122062449 122062521 -44587775 + A-rich Low_complexity Low_complexity 1 65 0 1 1516 28 0 0 0 chrX 122062550 122062578 -44587718 + AT_rich Low_complexity Low_complexity 1 28 0 1 1516 30 27 0 0 chrX 122062631 122062668 -44587628 + AT_rich Low_complexity Low_complexity 1 37 0 1 1516 273 140 0 0 chrX 122062698 122062755 -44587541 + (T)n Simple_repeat Simple_repeat 1 57 0 1 1516 725 194 7 0 chrX 122062759 122062898 -44587398 - B1_Mus1 SINE Alu -7 141 2 1 1516 22 0 0 0 chrX 122062932 122062954 -44587342 + AT_rich Low_complexity Low_complexity 1 22 0 1 1516 411 21 0 0 chrX 122062961 122063009 -44587287 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1516 3511 99 8 76 chrX 122063009 122063634 -44586662 - RLTR6_Mm LTR ERV1 -70 584 1 1 1516 349 238 25 12 chrX 122063622 122063644 -44586652 + ID SINE ID 60 82 -142 1 1516 477 122 0 0 chrX 122063644 122063718 -44586578 + B1_Mus2 SINE Alu 2 75 -72 1 1516 2477 98 164 84 chrX 122063718 122064278 -44586018 + RLTR6_Mm LTR ERV1 1 605 -49 1 1516 4294 50 12 12 chrX 122064278 122065014 -44585282 + RLTR6-int LTR ERV1 1 773 -7005 1 1516 250 128 0 78 chrX 122065005 122065056 -44585240 + MMVL30-int LTR ERV1 372 418 -7138 1 1516 277 96 19 0 chrX 122065092 122065144 -44585152 + MMVL30-int LTR ERV1 325 377 -2922 1 1516 5729 40 3 4 chrX 122065492 122066189 -44584107 + MMVL30-int LTR ERV1 772 1467 -2231 1 1516 9697 34 32 7 chrX 122066402 122068609 -44581687 + MMVL30-int LTR ERV1 1437 3698 0 1 1516 2301 100 171 87 chrX 122068609 122069148 -44581148 + RLTR6_Mm LTR ERV1 1 584 -70 1 1516 579 88 0 0 chrX 122069144 122069224 -44581072 + B1_Mm SINE Alu 68 147 0 1 1516 534 16 0 0 chrX 122069270 122069333 -44580963 + (CAAAA)n Simple_repeat Simple_repeat 3 65 0 1 1516 201 39 0 0 chrX 122069390 122069416 -44580880 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1516 180 27 0 75 chrX 122069486 122069526 -44580770 + (TTTTG)n Simple_repeat Simple_repeat 1 37 0 1 1516 904 119 14 7 chrX 122069526 122069670 -44580626 - B1_Mus1 SINE Alu -2 146 2 1 1516 281 127 0 53 chrX 122069712 122069787 -44580509 + A-rich Low_complexity Low_complexity 1 71 0 1 1516 195 42 0 0 chrX 122069813 122069837 -44580459 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1516 207 0 0 0 chrX 122069870 122069893 -44580403 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1516 210 37 0 0 chrX 122069988 122070015 -44580281 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1516 960 129 0 13 chrX 122070027 122070176 -44580120 - B1_Mus1 SINE Alu 0 148 2 1 1516 24 32 0 0 chrX 122070198 122070229 -44580067 + AT_rich Low_complexity Low_complexity 1 31 0 1 1516 189 0 0 0 chrX 122070238 122070259 -44580037 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 1516 789 110 0 0 chrX 122070457 122070575 -44579721 + (TTCC)n Simple_repeat Simple_repeat 4 121 0 1 1516 808 144 14 0 chrX 122070583 122070722 -44579574 - B1_Mus1 SINE Alu -6 142 2 1 1516 234 136 0 0 chrX 122070764 122070808 -44579488 + (CAAAAA)n Simple_repeat Simple_repeat 2 45 0 1 1516 198 0 0 0 chrX 122070841 122070863 -44579433 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 1516 474 120 0 0 chrX 122071065 122071140 -44579156 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 1 1516 838 157 7 0 chrX 122071146 122071286 -44579010 - B1_Mus1 SINE Alu -6 142 2 1 1516 299 65 0 21 chrX 122071351 122071398 -44578898 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1516 184 30 29 29 chrX 122071639 122071673 -44578623 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 1 1516 834 150 7 0 chrX 122071675 122071815 -44578481 - B1_Mus1 SINE Alu -6 142 2 1 1516 180 97 0 0 chrX 122072097 122072128 -44578168 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1516 830 54 9 0 chrX 122072159 122072271 -44578025 + (TTTC)n Simple_repeat Simple_repeat 3 115 0 1 1516 891 142 0 0 chrX 122072285 122072419 -44577877 - B1_Mus1 SINE Alu -13 135 2 1 1516 189 0 0 0 chrX 122072587 122072608 -44577688 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1 1516 770 172 14 0 chrX 122072771 122072916 -44577380 - B1_Mus1 SINE Alu 0 148 2 1 1516 22 0 0 0 chrX 122072950 122072972 -44577324 + AT_rich Low_complexity Low_complexity 1 22 0 1 1516 186 43 0 0 chrX 122072977 122073000 -44577296 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1516 975 123 0 7 chrX 122073011 122073158 -44577138 + B1_Mus2 SINE Alu 2 147 0 1 1516 254 64 0 60 chrX 122073184 122073234 -44577062 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 1516 189 0 0 0 chrX 122073300 122073321 -44576975 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1516 279 0 0 0 chrX 122073351 122073382 -44576914 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1516 873 104 20 27 chrX 122073455 122073603 -44576693 - B1_Mus1 SINE Alu 0 148 2 1 1516 261 114 0 141 chrX 122073645 122073808 -44576488 + A-rich Low_complexity Low_complexity 1 140 0 1 1516 32 43 0 0 chrX 122073873 122073919 -44576377 + AT_rich Low_complexity Low_complexity 1 46 0 1 1516 240 122 0 0 chrX 122073949 122073990 -44576306 + (T)n Simple_repeat Simple_repeat 1 41 0 1 1516 895 130 7 14 chrX 122073990 122074138 -44576158 - B1_Mus1 SINE Alu 0 148 2 1 1516 189 0 0 0 chrX 122074197 122074218 -44576078 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 1516 618 99 0 0 chrX 122074417 122074508 -44575788 + (TTCC)n Simple_repeat Simple_repeat 3 93 0 1 1516 843 138 14 0 chrX 122074533 122074671 -44575625 - B1_Mus1 SINE Alu -7 141 2 1 1516 192 125 0 0 chrX 122074722 122074754 -44575542 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 1 1516 432 0 0 0 chrX 122074787 122074835 -44575461 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1516 590 122 10 0 chrX 122075026 122075124 -44575172 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 1 1516 781 187 7 0 chrX 122075129 122075268 -44575028 - B1_Mus2 SINE Alu -6 141 2 1 1516 317 62 0 20 chrX 122075333 122075382 -44574914 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1516 184 30 29 29 chrX 122075620 122075654 -44574642 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 1 1516 815 157 7 0 chrX 122075656 122075796 -44574500 - B1_Mus1 SINE Alu -6 142 2 1 1516 180 97 0 0 chrX 122076075 122076106 -44574190 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1516 907 64 14 0 chrX 122076137 122076277 -44574019 + (TTTC)n Simple_repeat Simple_repeat 2 143 0 1 1516 849 149 0 0 chrX 122076296 122076430 -44573866 - B1_Mus1 SINE Alu -13 135 2 1 1516 204 40 0 0 chrX 122076598 122076623 -44573673 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1 1516 806 159 14 0 chrX 122076786 122076931 -44573365 - B1_Mus1 SINE Alu 0 148 2 1 1516 22 0 0 0 chrX 122076965 122076987 -44573309 + AT_rich Low_complexity Low_complexity 1 22 0 1 1516 255 61 0 0 chrX 122076992 122077025 -44573271 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1516 992 116 0 7 chrX 122077037 122077185 -44573111 + B1_Mus2 SINE Alu 1 147 0 1 1516 247 42 0 78 chrX 122077211 122077262 -44573034 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 1516 22 70 0 0 chrX 122077278 122077321 -44572975 + AT_rich Low_complexity Low_complexity 1 43 0 1 1516 279 0 0 0 chrX 122077333 122077364 -44572932 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1516 783 132 20 27 chrX 122077481 122077629 -44572667 - B1_Mus1 SINE Alu 0 148 2 1 1516 306 50 0 0 chrX 122077674 122077714 -44572582 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 1 1516 198 0 0 0 chrX 122077802 122077824 -44572472 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 1 1516 312 27 0 0 chrX 122077972 122078009 -44572287 + (T)n Simple_repeat Simple_repeat 1 37 0 1 1516 828 158 7 14 chrX 122078020 122078168 -44572128 - B1_Mus1 SINE Alu 0 148 2 1 1516 609 136 0 0 chrX 122078440 122078543 -44571753 + (TTCC)n Simple_repeat Simple_repeat 3 105 0 1 1516 820 144 14 0 chrX 122078555 122078694 -44571602 - B1_Mus1 SINE Alu -6 142 2 1 1516 180 158 0 0 chrX 122078740 122078778 -44571518 + A-rich Low_complexity Low_complexity 2 39 0 1 1516 180 0 0 0 chrX 122078813 122078833 -44571463 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1516 680 123 9 0 chrX 122079025 122079139 -44571157 + (TTTC)n Simple_repeat Simple_repeat 2 116 0 1 1516 773 187 7 0 chrX 122079144 122079283 -44571013 - B1_Mus2 SINE Alu -6 141 2 1 1516 299 65 0 21 chrX 122079348 122079395 -44570901 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1516 210 263 0 76 chrX 122079397 122079541 -44570755 + A-rich Low_complexity Low_complexity 6 138 0 1 1516 184 30 29 29 chrX 122079637 122079671 -44570625 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 1 1516 822 157 7 0 chrX 122079673 122079813 -44570483 - B1_Mus1 SINE Alu -6 142 2 1 1516 21 0 0 0 chrX 122079847 122079868 -44570428 + AT_rich Low_complexity Low_complexity 1 21 0 1 1516 180 97 0 0 chrX 122080102 122080133 -44570163 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1516 488 16 16 0 chrX 122080164 122080225 -44570071 + (TTTC)n Simple_repeat Simple_repeat 2 63 0 1 1516 873 142 0 0 chrX 122080242 122080376 -44569920 - B1_Mus1 SINE Alu -13 135 2 1 1516 261 0 0 0 chrX 122080544 122080573 -44569723 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1 1516 786 178 7 0 chrX 122080741 122080887 -44569409 - B1_Mus1 SINE Alu 0 148 2 1 1516 22 0 0 0 chrX 122080921 122080943 -44569353 + AT_rich Low_complexity Low_complexity 1 22 0 2 1516 264 30 0 0 chrX 122080948 122080981 -44569315 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1516 961 129 0 7 chrX 122080993 122081141 -44569155 + B1_Mus2 SINE Alu 1 147 0 2 1516 250 59 0 73 chrX 122081167 122081222 -44569074 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 2 1516 216 0 0 0 chrX 122081287 122081311 -44568985 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1516 824 125 20 27 chrX 122081425 122081573 -44568723 - B1_Mus1 SINE Alu 0 148 2 2 1516 330 45 0 0 chrX 122081615 122081659 -44568637 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 2 1516 207 0 0 0 chrX 122081746 122081769 -44568527 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2 1516 32 43 0 0 chrX 122081851 122081897 -44568399 + AT_rich Low_complexity Low_complexity 1 46 0 2 1516 273 57 0 0 chrX 122081927 122081962 -44568334 + (T)n Simple_repeat Simple_repeat 1 35 0 2 1516 832 125 20 14 chrX 122081973 122082119 -44568177 - B1_Mus1 SINE Alu 0 148 2 2 1516 202 83 0 130 chrX 122082161 122082230 -44568066 + A-rich Low_complexity Low_complexity 1 60 0 2 1516 29 47 0 0 chrX 122082294 122082337 -44567959 + AT_rich Low_complexity Low_complexity 1 43 0 2 1516 252 100 0 0 chrX 122082367 122082407 -44567889 + (T)n Simple_repeat Simple_repeat 1 40 0 2 1516 846 151 7 14 chrX 122082407 122082555 -44567741 - B1_Mus1 SINE Alu 0 148 2 2 1516 704 94 9 0 chrX 122082831 122082937 -44567359 + (TTCC)n Simple_repeat Simple_repeat 3 109 0 2 1516 694 139 93 0 chrX 122082944 122083073 -44567223 - B1_Mus1 SINE Alu -6 142 2 2 1516 207 146 0 0 chrX 122083116 122083157 -44567139 + (A)n Simple_repeat Simple_repeat 1 41 0 2 1516 623 117 0 10 chrX 122083408 122083512 -44566784 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 2 1516 762 194 7 0 chrX 122083517 122083656 -44566640 - B1_Mus2 SINE Alu -6 141 2 2 1516 299 65 0 21 chrX 122083721 122083768 -44566528 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1516 815 157 7 0 chrX 122084046 122084186 -44566110 - B1_Mus1 SINE Alu -6 142 2 2 1516 180 97 0 0 chrX 122084476 122084507 -44565789 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1516 668 12 12 0 chrX 122084538 122084619 -44565677 + (TTTC)n Simple_repeat Simple_repeat 2 83 0 2 1516 873 142 0 0 chrX 122084636 122084770 -44565526 - B1_Mus1 SINE Alu -13 135 2 2 1516 261 0 0 0 chrX 122084938 122084967 -44565329 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2 1516 753 192 7 0 chrX 122085131 122085277 -44565019 - B1_Mus1 SINE Alu 0 148 2 2 1516 22 0 0 0 chrX 122085311 122085333 -44564963 + AT_rich Low_complexity Low_complexity 1 22 0 2 1516 264 30 0 0 chrX 122085338 122085371 -44564925 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1516 919 130 7 7 chrX 122085383 122085530 -44564766 + B1_Mus2 SINE Alu 1 147 0 2 1516 217 78 0 73 chrX 122085558 122085613 -44564683 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 2 1516 189 0 0 0 chrX 122085675 122085696 -44564600 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1516 812 132 20 27 chrX 122085811 122085959 -44564337 - B1_Mus1 SINE Alu 0 148 2 2 1516 312 220 0 89 chrX 122085980 122086004 -44564292 + A-rich Low_complexity Low_complexity 1 23 0 2 1516 261 57 0 0 chrX 122086004 122086039 -44564257 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2 1516 312 220 0 89 chrX 122086039 122086204 -44564092 + A-rich Low_complexity Low_complexity 24 173 0 2 1516 31 44 0 0 chrX 122086230 122086275 -44564021 + AT_rich Low_complexity Low_complexity 1 45 0 2 1516 318 50 0 0 chrX 122086305 122086345 -44563951 + (T)n Simple_repeat Simple_repeat 1 40 0 2 1516 832 125 20 14 chrX 122086356 122086502 -44563794 - B1_Mus1 SINE Alu 0 148 2 2 1516 278 26 26 0 chrX 122086547 122086586 -44563710 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 2 1516 205 169 0 92 chrX 122086589 122086654 -44563642 + A-rich Low_complexity Low_complexity 1 59 0 2 1516 207 69 0 0 chrX 122086670 122086699 -44563597 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1516 32 43 0 0 chrX 122086773 122086819 -44563477 + AT_rich Low_complexity Low_complexity 1 46 0 2 1516 297 89 0 0 chrX 122086849 122086894 -44563402 + (T)n Simple_repeat Simple_repeat 1 45 0 2 1516 855 144 7 14 chrX 122086894 122087042 -44563254 - B1_Mus1 SINE Alu 0 148 2 2 1516 323 167 0 15 chrX 122087317 122087384 -44562912 + CT-rich Low_complexity Low_complexity 2 67 0 2 1516 740 148 14 7 chrX 122087385 122087528 -44562768 - B1_Mus1 SINE Alu -1 147 4 2 1516 210 154 0 0 chrX 122087575 122087614 -44562682 + A-rich Low_complexity Low_complexity 2 40 0 2 1516 561 76 0 0 chrX 122087639 122087718 -44562578 + (TA)n Simple_repeat Simple_repeat 1 79 0 2 1516 471 35 0 0 chrX 122087917 122087974 -44562322 + (TTCC)n Simple_repeat Simple_repeat 3 59 0 2 1516 381 187 0 0 chrX 122088051 122088126 -44562170 + CT-rich Low_complexity Low_complexity 2 76 0 2 1516 785 173 7 7 chrX 122088130 122088270 -44562026 - B1_Mus1 SINE Alu -6 142 3 2 1516 299 121 0 17 chrX 122088331 122088390 -44561906 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1516 510 17 0 0 chrX 122088469 122088528 -44561768 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 2 1516 215 31 0 30 chrX 122088657 122088690 -44561606 + (TTTG)n Simple_repeat Simple_repeat 3 34 0 2 1516 796 157 7 0 chrX 122088698 122088838 -44561458 - B1_Mus1 SINE Alu -6 142 2 2 1516 26 0 0 0 chrX 122088872 122088898 -44561398 + AT_rich Low_complexity Low_complexity 1 26 0 2 1516 258 106 0 0 chrX 122089127 122089174 -44561122 + (CAAAAA)n Simple_repeat Simple_repeat 4 50 0 2 1516 998 45 8 0 chrX 122089205 122089337 -44560959 + (TTTC)n Simple_repeat Simple_repeat 3 135 0 2 1516 873 142 0 0 chrX 122089356 122089490 -44560806 - B1_Mus1 SINE Alu -13 135 2 2 1516 207 69 0 0 chrX 122089658 122089687 -44560609 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2 1516 806 159 14 0 chrX 122089848 122089993 -44560303 - B1_Mus1 SINE Alu 0 148 2 2 1516 22 0 0 0 chrX 122090027 122090049 -44560247 + AT_rich Low_complexity Low_complexity 1 22 0 2 1516 255 61 0 0 chrX 122090054 122090087 -44560209 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1516 998 116 0 7 chrX 122090099 122090247 -44560049 + B1_Mus2 SINE Alu 1 147 0 2 1516 247 42 0 78 chrX 122090273 122090324 -44559972 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 1516 21 71 0 0 chrX 122090340 122090382 -44559914 + AT_rich Low_complexity Low_complexity 1 42 0 2 1516 225 0 0 0 chrX 122090394 122090419 -44559877 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1516 818 125 20 27 chrX 122090535 122090683 -44559613 - B1_Mus1 SINE Alu 0 148 2 2 1516 202 220 10 62 chrX 122090704 122090728 -44559568 + A-rich Low_complexity Low_complexity 1 22 0 2 1516 252 59 0 0 chrX 122090728 122090762 -44559534 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1516 202 220 10 62 chrX 122090762 122090834 -44559462 + A-rich Low_complexity Low_complexity 23 92 0 2 1516 198 0 0 0 chrX 122090853 122090875 -44559421 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 2 1516 222 37 0 0 chrX 122091024 122091051 -44559245 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1516 841 151 7 14 chrX 122091062 122091210 -44559086 - B1_Mus1 SINE Alu 0 148 2 2 1516 189 0 0 0 chrX 122091269 122091290 -44559006 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1516 768 99 0 0 chrX 122091489 122091600 -44558696 + (TTCC)n Simple_repeat Simple_repeat 3 113 0 2 1516 809 151 14 0 chrX 122091607 122091746 -44558550 - B1_Mus1 SINE Alu -6 142 2 2 1516 192 163 0 0 chrX 122091789 122091832 -44558464 + A-rich Low_complexity Low_complexity 3 45 0 2 1516 432 0 0 0 chrX 122091867 122091915 -44558381 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1516 626 140 9 0 chrX 122092107 122092221 -44558075 + (TTTC)n Simple_repeat Simple_repeat 2 116 0 2 1516 773 187 7 0 chrX 122092226 122092365 -44557931 - B1_Mus2 SINE Alu -6 141 2 2 1516 299 65 0 21 chrX 122092430 122092477 -44557819 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1516 213 204 0 0 chrX 122092479 122092528 -44557768 + A-rich Low_complexity Low_complexity 6 54 0 2 1516 184 30 29 29 chrX 122092717 122092751 -44557545 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 2 1516 834 150 7 0 chrX 122092753 122092893 -44557403 - B1_Mus1 SINE Alu -6 142 2 2 1516 180 97 0 0 chrX 122093179 122093210 -44557086 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1516 668 12 12 0 chrX 122093241 122093322 -44556974 + (TTTC)n Simple_repeat Simple_repeat 2 83 0 2 1516 873 142 0 0 chrX 122093339 122093473 -44556823 - B1_Mus1 SINE Alu -13 135 2 2 1516 261 0 0 0 chrX 122093641 122093670 -44556626 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2 1516 753 192 7 0 chrX 122093834 122093980 -44556316 - B1_Mus1 SINE Alu 0 148 2 2 1516 22 0 0 0 chrX 122094014 122094036 -44556260 + AT_rich Low_complexity Low_complexity 1 22 0 2 1516 264 30 0 0 chrX 122094041 122094074 -44556222 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1516 961 129 0 7 chrX 122094086 122094234 -44556062 + B1_Mus2 SINE Alu 1 147 0 2 1516 345 348 47 26 chrX 122094235 122094427 -44555869 + L1M4b LINE L1 2069 2264 -5070 2 1516 798 132 20 27 chrX 122094538 122094686 -44555610 - B1_Mus1 SINE Alu 0 148 2 2 1516 252 59 0 0 chrX 122094731 122094765 -44555531 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1516 201 238 0 0 chrX 122094771 122094834 -44555462 + A-rich Low_complexity Low_complexity 1 63 0 2 1516 198 0 0 0 chrX 122094855 122094877 -44555419 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 2 1516 222 37 0 0 chrX 122095026 122095053 -44555243 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1516 841 151 7 14 chrX 122095064 122095212 -44555084 - B1_Mus1 SINE Alu 0 148 2 3 1516 189 0 0 0 chrX 122095271 122095292 -44555004 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1516 768 99 0 0 chrX 122095491 122095602 -44554694 + (TTCC)n Simple_repeat Simple_repeat 3 113 0 3 1516 809 151 14 0 chrX 122095609 122095748 -44554548 - B1_Mus1 SINE Alu -6 142 2 3 1516 192 163 0 0 chrX 122095791 122095834 -44554462 + A-rich Low_complexity Low_complexity 3 45 0 3 1516 414 0 0 0 chrX 122095869 122095915 -44554381 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1516 626 140 9 0 chrX 122096107 122096221 -44554075 + (TTTC)n Simple_repeat Simple_repeat 2 116 0 3 1516 773 187 7 0 chrX 122096226 122096365 -44553931 - B1_Mus2 SINE Alu -6 141 2 3 1516 299 65 0 21 chrX 122096430 122096477 -44553819 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1516 213 204 0 0 chrX 122096479 122096528 -44553768 + A-rich Low_complexity Low_complexity 6 54 0 3 1516 184 30 29 29 chrX 122096717 122096751 -44553545 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 3 1516 834 150 7 0 chrX 122096753 122096893 -44553403 - B1_Mus1 SINE Alu -6 142 2 3 1516 180 97 0 0 chrX 122097179 122097210 -44553086 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 3 1516 641 45 11 0 chrX 122097241 122097330 -44552966 + (TTTC)n Simple_repeat Simple_repeat 2 91 0 3 1516 873 142 0 0 chrX 122097347 122097481 -44552815 - B1_Mus1 SINE Alu -13 135 2 3 1516 261 0 0 0 chrX 122097649 122097678 -44552618 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 3 1516 753 192 7 0 chrX 122097842 122097988 -44552308 - B1_Mus1 SINE Alu 0 148 2 3 1516 22 0 0 0 chrX 122098022 122098044 -44552252 + AT_rich Low_complexity Low_complexity 1 22 0 3 1516 264 30 0 0 chrX 122098049 122098082 -44552214 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1516 961 129 0 7 chrX 122098094 122098242 -44552054 + B1_Mus2 SINE Alu 1 147 0 3 1516 351 353 31 26 chrX 122098243 122098438 -44551858 + L1M4b LINE L1 2069 2264 -5070 3 1516 798 132 20 27 chrX 122098549 122098697 -44551599 - B1_Mus1 SINE Alu 0 148 2 3 1516 276 53 0 0 chrX 122098739 122098777 -44551519 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 3 1516 207 0 0 0 chrX 122098866 122098889 -44551407 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 3 1516 35 24 0 0 chrX 122098974 122099016 -44551280 + AT_rich Low_complexity Low_complexity 1 42 0 3 1516 261 83 0 0 chrX 122099046 122099082 -44551214 + (T)n Simple_repeat Simple_repeat 1 36 0 3 1516 832 125 20 14 chrX 122099093 122099239 -44551057 - B1_Mus1 SINE Alu 0 148 2 3 1516 243 79 0 0 chrX 122099281 122099319 -44550977 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 3 1516 305 319 56 91 chrX 122099324 122099555 -44550741 + L1M4b LINE L1 3945 4167 -2839 3 1516 270 95 0 0 chrX 122099581 122099623 -44550673 + (T)n Simple_repeat Simple_repeat 1 42 0 3 1516 855 144 7 14 chrX 122099623 122099771 -44550525 - B1_Mus1 SINE Alu 0 148 2 3 1516 717 97 0 0 chrX 122100047 122100150 -44550146 + (TTCC)n Simple_repeat Simple_repeat 3 105 0 3 1516 820 144 14 0 chrX 122100157 122100296 -44550000 - B1_Mus1 SINE Alu -6 142 2 3 1516 201 159 0 0 chrX 122100339 122100383 -44549913 + A-rich Low_complexity Low_complexity 2 45 0 3 1516 450 0 0 0 chrX 122100418 122100468 -44549828 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1516 747 120 0 0 chrX 122100667 122100784 -44549512 + (TTCC)n Simple_repeat Simple_repeat 3 119 0 3 1516 773 187 7 0 chrX 122100790 122100929 -44549367 - B1_Mus2 SINE Alu -6 141 2 3 1516 299 65 0 21 chrX 122100994 122101041 -44549255 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1516 184 30 29 29 chrX 122101282 122101316 -44548980 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 3 1516 834 150 7 0 chrX 122101318 122101458 -44548838 - B1_Mus1 SINE Alu -6 142 2 3 1516 180 97 0 0 chrX 122101744 122101775 -44548521 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 3 1516 533 52 13 0 chrX 122101806 122101883 -44548413 + (TTTC)n Simple_repeat Simple_repeat 2 79 0 3 1516 873 142 0 0 chrX 122101900 122102034 -44548262 - B1_Mus1 SINE Alu -13 135 2 3 1516 261 0 0 0 chrX 122102202 122102231 -44548065 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 3 1516 753 192 7 0 chrX 122102396 122102542 -44547754 - B1_Mus1 SINE Alu 0 148 2 3 1516 264 30 0 0 chrX 122102603 122102636 -44547660 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1516 375 277 67 8 chrX 122102636 122102648 -44547648 + B4 SINE B4 72 190 -102 3 1516 615 131 0 0 chrX 122102648 122102747 -44547549 + B1_Mus2 SINE Alu 1 99 -48 3 1516 6405 113 3 2 chrX 122152747 122154337 -44495959 + L1_Mus2 LINE L1 4976 6566 0 3 1516 576 51 0 0 chrX 122154340 122154418 -44495878 - RLTR22_Mus LTR ERVK -1437 371 294 3 1516 200 94 31 0 chrX 122154418 122154450 -44495846 + (TTTC)n Simple_repeat Simple_repeat 4 36 0 3 1516 1899 133 3 7 chrX 122154954 122155256 -44495040 - RLTR22_Mus LTR ERVK -1505 303 3 3 1516 11024 143 33 13 chrX 122155258 122155849 -44494447 - L1_Mur1 LINE L1 -1184 4702 4123 3 1516 369 0 0 0 chrX 122155849 122155890 -44494406 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1516 11024 143 33 13 chrX 122155890 122157447 -44492849 - L1_Mur1 LINE L1 -1764 4122 2510 3 1516 1565 199 54 88 chrX 122157447 122157854 -44492442 - RLTR9C LTR ERVK 0 393 1 3 1516 456 92 0 26 chrX 122157856 122157934 -44492362 - ETnERV2-int LTR ERVK -4 7402 7327 3 1516 1000 196 8 59 chrX 122158144 122158730 -44491566 - ETnERV2-int LTR ERVK -1703 3141 2901 3 1516 2186 83 23 3 chrX 122158739 122159041 -44491255 + IAPLTR2b LTR ERVK 1 308 -19 3 189 4421 123 88 66 chrX 122159061 122159995 -44490301 + IAPEz-int LTR ERVK 1 995 -5486 3 1517 398 88 0 0 chrX 122159995 122160052 -44490244 + B1_Mus1 SINE Alu 1 57 -91 3 1517 1768 75 4 0 chrX 122160057 122160296 -44490000 + IAPEY3-int LTR ERVK 2258 2497 -5183 3 1517 12609 85 14 9 chrX 122160295 122162112 -44488184 + IAPEz-int LTR ERVK 4656 6481 0 3 1517 2542 54 35 0 chrX 122162112 122162426 -44487870 + IAPLTR2b LTR ERVK 1 325 -2 3 1517 3738 186 34 32 chrX 122162430 122163878 -44486418 - ETnERV2-int LTR ERVK -3321 4085 2357 3 1517 929 139 0 18 chrX 122164430 122164598 -44485698 - RLTR13D1 LTR ERVK -156 650 486 3 1517 2121 194 26 26 chrX 122164598 122165100 -44485196 - ETnERV2-int LTR ERVK -4409 2997 2496 3 1517 3694 203 27 107 chrX 122165127 122166388 -44483908 - MMETn-int LTR ERVK -3675 1169 10 3 1517 1597 197 32 64 chrX 122166397 122166803 -44483493 - RLTR9C LTR ERVK 0 393 1 3 1517 2560 128 2 0 chrX 122166803 122167232 -44483064 - L1_Mur1 LINE L1 -3371 2515 2086 3 1517 3308 137 22 0 chrX 122167625 122168223 -44482073 - L1_Mur1 LINE L1 -3847 2039 1429 3 1517 223 49 0 47 chrX 122170026 122170069 -44480227 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 3 1517 276 52 62 49 chrX 122170175 122170256 -44480040 + T-rich Low_complexity Low_complexity 2 83 0 3 1517 338 290 112 113 chrX 122170300 122170676 -44479620 - L1MC4 LINE L1 -2869 3345 3138 3 1517 23 97 0 0 chrX 122171175 122171247 -44479049 + AT_rich Low_complexity Low_complexity 1 72 0 3 1517 223 246 0 0 chrX 122171619 122171688 -44478608 + T-rich Low_complexity Low_complexity 1 69 0 3 1517 408 55 0 0 chrX 122171810 122171865 -44478431 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1517 26 64 0 0 chrX 122172114 122172161 -44478135 + AT_rich Low_complexity Low_complexity 1 47 0 3 1517 198 91 0 0 chrX 122172221 122172254 -44478042 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1517 222 37 0 0 chrX 122172372 122172399 -44477897 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 3 1517 218 56 0 27 chrX 122172742 122172779 -44477517 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 3 1517 194 0 39 0 chrX 122172875 122172901 -44477395 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 3 1517 1027 109 0 0 chrX 122172901 122173048 -44477248 - B1_Mus1 SINE Alu 0 148 2 3 1517 204 149 0 60 chrX 122173131 122173181 -44477115 + A-rich Low_complexity Low_complexity 3 49 0 3 1517 1132 62 7 0 chrX 122173393 122173538 -44476758 - B1_Mus2 SINE Alu 0 147 2 3 1517 387 41 0 0 chrX 122173840 122173889 -44476407 + (T)n Simple_repeat Simple_repeat 1 49 0 3 1517 240 35 0 0 chrX 122174740 122174769 -44475527 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 3 1517 1023 98 14 0 chrX 122174769 122174912 -44475384 - B1_Mus1 SINE Alu -2 146 2 3 1517 22 0 0 0 chrX 122174947 122174969 -44475327 + AT_rich Low_complexity Low_complexity 1 22 0 3 1517 204 67 0 0 chrX 122174969 122174999 -44475297 + (CAA)n Simple_repeat Simple_repeat 1 30 0 3 1517 207 0 0 0 chrX 122175026 122175049 -44475247 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 3 1517 404 37 0 18 chrX 122175090 122175145 -44475151 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 3 1517 969 56 0 0 chrX 122175145 122175271 -44475025 - B1_Mus2 SINE Alu -10 137 12 3 1517 216 250 0 32 chrX 122175313 122175408 -44474888 + A-rich Low_complexity Low_complexity 5 96 0 3 1517 249 33 0 0 chrX 122175504 122175534 -44474762 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 3 1517 193 75 50 0 chrX 122175642 122175682 -44474614 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 3 1517 195 114 0 0 chrX 122175914 122175949 -44474347 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 1517 216 0 0 0 chrX 122175984 122176008 -44474288 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1517 21 36 0 0 chrX 122176290 122176318 -44473978 + AT_rich Low_complexity Low_complexity 1 28 0 3 1517 216 0 0 0 chrX 122176342 122176366 -44473930 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1517 203 136 0 78 chrX 122177157 122177221 -44473075 + T-rich Low_complexity Low_complexity 1 59 0 3 1517 305 359 50 46 chrX 122177322 122177541 -44472755 - L1MEc LINE L1 -4919 1481 1262 3 1517 23 33 0 0 chrX 122178045 122178075 -44472221 + AT_rich Low_complexity Low_complexity 1 30 0 3 1517 23 0 0 0 chrX 122178232 122178255 -44472041 + AT_rich Low_complexity Low_complexity 1 23 0 3 1517 21 0 0 0 chrX 122178278 122178299 -44471997 + AT_rich Low_complexity Low_complexity 1 21 0 3 1517 23 97 0 0 chrX 122178438 122178510 -44471786 + AT_rich Low_complexity Low_complexity 1 72 0 3 1517 261 109 0 0 chrX 122178600 122178646 -44471650 + (T)n Simple_repeat Simple_repeat 1 46 0 3 1517 609 14 0 0 chrX 122178789 122178859 -44471437 + (TAA)n Simple_repeat Simple_repeat 1 70 0 3 1517 326 153 26 77 chrX 122179467 122179623 -44470673 + (TAA)n Simple_repeat Simple_repeat 3 150 0 3 1517 225 65 0 0 chrX 122179766 122179797 -44470499 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1517 789 160 20 14 chrX 122179805 122179951 -44470345 - B1_Mus1 SINE Alu 0 148 2 3 1517 216 0 0 0 chrX 122180002 122180026 -44470270 + (CAA)n Simple_repeat Simple_repeat 1 24 0 3 1517 252 0 0 0 chrX 122180024 122180052 -44470244 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1517 1277 78 6 0 chrX 122180292 122180471 -44469825 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 1517 369 207 0 0 chrX 122180480 122180562 -44469734 + CT-rich Low_complexity Low_complexity 4 85 0 4 1517 756 136 0 0 chrX 122180580 122180705 -44469591 + (TTC)n Simple_repeat Simple_repeat 2 126 0 4 1517 891 122 14 7 chrX 122180724 122180864 -44469432 - B1_Mus1 SINE Alu -6 142 2 4 1517 230 284 11 49 chrX 122180870 122181055 -44469241 + A-rich Low_complexity Low_complexity 3 180 0 4 1517 716 188 6 22 chrX 122181187 122181367 -44468929 + CT-rich Low_complexity Low_complexity 2 178 0 4 1517 805 166 7 0 chrX 122181374 122181513 -44468783 - B1_Mus1 SINE Alu -7 141 2 4 1517 24 0 0 0 chrX 122181547 122181571 -44468725 + AT_rich Low_complexity Low_complexity 1 24 0 4 1517 254 50 25 0 chrX 122181621 122181661 -44468635 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 4 1517 476 25 36 36 chrX 122181891 122181974 -44468322 + (TTTTG)n Simple_repeat Simple_repeat 2 84 0 4 1517 818 177 0 0 chrX 122181980 122182121 -44468175 - B1_Mus1 SINE Alu -6 142 2 4 1517 372 230 13 45 chrX 122182136 122182291 -44468005 + A-rich Low_complexity Low_complexity 1 150 0 4 1517 228 35 0 0 chrX 122182313 122182342 -44467954 + (A)n Simple_repeat Simple_repeat 1 29 0 4 1517 21 0 0 0 chrX 122182388 122182409 -44467887 + AT_rich Low_complexity Low_complexity 1 21 0 4 1517 981 92 0 0 chrX 122182441 122182583 -44467713 + (TTTC)n Simple_repeat Simple_repeat 2 143 0 4 1517 819 161 7 0 chrX 122182603 122182740 -44467556 - B1_Mus1 SINE Alu -8 140 3 4 1517 202 138 0 134 chrX 122182786 122182853 -44467443 + A-rich Low_complexity Low_complexity 1 58 0 4 1517 737 131 0 8 chrX 122183068 122183199 -44467097 + (TTTC)n Simple_repeat Simple_repeat 3 132 0 4 1517 864 129 14 0 chrX 122183202 122183341 -44466955 - B1_Mus1 SINE Alu -6 142 2 4 1517 28 0 0 0 chrX 122183434 122183462 -44466834 + AT_rich Low_complexity Low_complexity 1 28 0 4 1517 198 0 0 0 chrX 122183555 122183577 -44466719 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 4 1517 856 129 6 13 chrX 122183699 122183856 -44466440 + (TTTC)n Simple_repeat Simple_repeat 2 157 0 4 1517 817 161 14 0 chrX 122183856 122183999 -44466297 - B1_Mus1 SINE Alu 0 148 4 4 1517 270 293 0 0 chrX 122186476 122186558 -44463738 - MurSAT1 Satellite Satellite -38 82 1 4 1517 251 288 6 6 chrX 122187603 122187712 -44462584 - MurSAT1 Satellite Satellite -10 109 1 4 1517 246 360 0 0 chrX 122188149 122188276 -44462020 - MurSAT1 Satellite Satellite -22 127 1 4 1517 326 310 17 17 chrX 122188488 122188775 -44461521 - MurSAT1 Satellite Satellite -1 287 1 4 1517 275 324 0 0 chrX 122189179 122189288 -44461008 - MurSAT1 Satellite Satellite -4 116 1 4 1517 283 301 9 9 chrX 122189913 122190027 -44460269 - MurSAT1 Satellite Satellite -1 119 6 4 1517 281 326 11 11 chrX 122190063 122190193 -44460103 - MurSAT1 Satellite Satellite -1 130 1 4 1517 236 186 0 0 chrX 122190516 122190559 -44459737 - MurSAT1 Satellite Satellite -28 92 50 4 1517 245 163 0 0 chrX 122190897 122190940 -44459356 - MurSAT1 Satellite Satellite -28 92 50 4 1517 225 284 24 24 chrX 122191278 122191361 -44458935 - MurSAT1 Satellite Satellite -28 92 10 4 1517 258 330 0 0 chrX 122192332 122192429 -44457867 - MurSAT1 Satellite Satellite -23 97 1 4 1517 266 286 35 12 chrX 122192840 122192925 -44457371 - MurSAT1 Satellite Satellite -27 93 7 4 1517 243 298 35 12 chrX 122193989 122194074 -44456222 - MurSAT1 Satellite Satellite -27 93 7 4 1517 252 330 0 0 chrX 122194630 122194727 -44455569 - MurSAT1 Satellite Satellite -23 97 1 4 1517 243 298 35 12 chrX 122195138 122195223 -44455073 - MurSAT1 Satellite Satellite -27 93 7 4 1517 252 330 0 0 chrX 122195779 122195876 -44454420 - MurSAT1 Satellite Satellite -23 97 1 4 1517 293 279 36 6 chrX 122196287 122196403 -44453893 - MurSAT1 Satellite Satellite -27 119 1 4 1517 235 337 0 0 chrX 122196928 122197023 -44453273 - MurSAT1 Satellite Satellite -23 97 3 4 1517 284 313 15 5 chrX 122197436 122197612 -44452684 - MurSAT1 Satellite Satellite -27 177 1 4 1517 309 308 15 5 chrX 122198585 122198761 -44451535 - MurSAT1 Satellite Satellite -27 177 1 4 1517 274 308 15 5 chrX 122199734 122199910 -44450386 - MurSAT1 Satellite Satellite -27 177 1 4 1517 248 291 32 16 chrX 122200903 122201034 -44449262 - MurSAT1 Satellite Satellite -2 133 1 4 1517 338 289 0 0 chrX 122201533 122201630 -44448666 - MurSAT1 Satellite Satellite -23 97 1 4 1517 286 295 10 5 chrX 122201961 122202104 -44448192 - MurSAT1 Satellite Satellite -21 143 1 4 1517 320 325 11 11 chrX 122202306 122202510 -44447786 - MurSAT1 Satellite Satellite -1 204 1 4 1517 228 315 35 35 chrX 122202550 122202665 -44447631 - MurSAT1 Satellite Satellite -5 115 1 4 1517 232 330 9 9 chrX 122203072 122203179 -44447117 - MurSAT1 Satellite Satellite -11 109 3 4 1517 310 21 21 21 chrX 122209307 122209355 -44440941 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 4 1517 2949 116 7 0 chrX 122209527 122209960 -44440336 + L1_Mus3 LINE L1 6197 6632 -6 4 1517 1219 63 0 12 chrX 122210706 122210948 -44439348 + (TTTC)n Simple_repeat Simple_repeat 1 239 0 4 1517 342 0 0 0 chrX 122210949 122210987 -44439309 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 4 1517 575 182 200 7 chrX 122210987 122211142 -44439154 - B2_Mm2 SINE B2 -10 185 1 4 1517 233 277 20 10 chrX 122215709 122215735 -44434561 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 4 1517 481 105 10 10 chrX 122215735 122215831 -44434465 + (TATG)n Simple_repeat Simple_repeat 1 96 0 4 1517 252 239 0 14 chrX 122215831 122215906 -44434390 + CT-rich Low_complexity Low_complexity 1 73 0 4 1517 536 246 59 18 chrX 122215941 122216111 -44434185 + ORR1B2 LTR MaLR 1 177 -190 4 1517 2028 211 57 76 chrX 122216176 122216249 -44434047 - RLTR21 LTR ERVK -368 1204 1131 4 1517 336 24 0 0 chrX 122216249 122216290 -44434006 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1517 2028 211 57 76 chrX 122216290 122216884 -44433412 - RLTR21 LTR ERVK -442 1130 550 4 1517 1319 221 20 78 chrX 122216922 122217266 -44433030 - RLTR21 LTR ERVK -1248 324 1 4 1517 241 295 0 18 chrX 122217634 122217748 -44432548 - Lx6 LINE L1 -17 7443 7332 4 1517 304 320 41 50 chrX 122217760 122217980 -44432316 - Lx6 LINE L1 -1338 6122 5905 4 1517 2089 197 24 31 chrX 122217986 122218169 -44432127 - MTC LTR MaLR 0 421 238 4 1517 6314 106 6 1 chrX 122218169 122219058 -44431238 + RLTR13B1 LTR ERVK 1 893 0 4 1517 2089 197 24 31 chrX 122219058 122219298 -44430998 - MTC LTR MaLR -184 237 1 4 1517 829 241 39 49 chrX 122219301 122219585 -44430711 - Lx7 LINE L1 -1796 5900 5620 4 1517 864 212 41 31 chrX 122219605 122219897 -44430399 - L1_Mur3 LINE L1 -2593 3287 2993 4 1517 5864 108 3 2 chrX 122219902 122220794 -44429502 - L1_Mus2 LINE L1 0 6566 5674 4 1517 3472 34 2 0 chrX 122220795 122221269 -44429027 - L1Md_F3 LINE L1 -562 6022 5548 4 1517 4338 60 0 2 chrX 122221269 122221819 -44428477 + L1Md_F3 LINE L1 6034 6582 -2 4 1517 770 181 7 0 chrX 122221822 122221960 -44428336 - L1_Mm LINE L1 -198 5685 5547 4 1517 5009 95 15 12 chrX 122221991 122223387 -44426909 + L1Md_F LINE L1 505 1904 -3979 4 1517 501 315 20 10 chrX 122223791 122223990 -44426306 - Lx8 LINE L1 -941 6532 6332 4 1517 399 301 47 23 chrX 122224334 122224611 -44425685 - Lx8 LINE L1 -175 5672 5401 4 1517 2913 254 44 15 chrX 122224620 122225372 -44424924 + ORR1D-int LTR MaLR 455 1228 -142 4 1517 408 158 73 0 chrX 122225494 122225576 -44424720 + MERVL_2A-int LTR ERVL 5674 5761 0 4 1517 552 244 7 44 chrX 122225576 122225713 -44424583 + MT2A LTR ERVL 1 132 -401 4 1517 1857 196 12 0 chrX 122225828 122226170 -44424126 - Lx7 LINE L1 -694 7002 6657 4 1517 578 275 26 92 chrX 122226165 122226178 -44424118 + Lx7 LINE L1 7305 7317 -379 4 1517 2189 112 16 3 chrX 122226178 122226501 -44423795 + ORR1A2 LTR MaLR 1 327 0 4 1517 578 275 26 92 chrX 122226501 122226876 -44423420 + Lx7 LINE L1 7318 7667 -29 4 1517 7150 239 37 117 chrX 122226874 122231366 -44418930 - Lx5 LINE L1 -19 7031 2881 4 1517 359 312 48 105 chrX 122231366 122231595 -44418701 - RLTR22_Mur LTR ERVK -73 1249 1034 4 1517 38369 8 0 1 chrX 122231595 122237359 -44412937 + L1Md_A LINE L1 1 5586 -297 4 1517 8999 2 0 1 chrX 122237359 122238356 -44411940 + L1Md_A LINE L1 5587 6582 0 4 1517 1042 278 116 80 chrX 122238465 122239270 -44411026 - RLTR22_Mur LTR ERVK -1046 802 1 4 1517 765 312 8 14 chrX 122239270 122239631 -44410665 - Lx5 LINE L1 -6466 1262 904 4 1517 207 0 0 0 chrX 122239631 122239654 -44410642 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1517 321 318 68 82 chrX 122240145 122240351 -44409945 - MTE2a LTR MaLR -10 369 167 4 1517 6979 55 1 11 chrX 122240355 122241255 -44409041 - L1Md_F3 LINE L1 -14 6570 5680 4 1517 362 288 70 62 chrX 122241255 122241400 -44408896 - MTE2a LTR MaLR -181 198 65 4 1517 183 42 0 0 chrX 122241400 122241424 -44408872 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1517 911 125 7 0 chrX 122241424 122241560 -44408736 - B1_Mm SINE Alu -9 138 2 4 1517 285 350 17 81 chrX 122241560 122241647 -44408649 - MTE2a LTR MaLR -337 82 4 4 1517 1252 277 84 20 chrX 122241715 122242058 -44408238 + ORR1D1 LTR MaLR 9 373 -1 4 1517 1938 239 77 30 chrX 122242526 122243035 -44407261 - RLTR20B3 LTR ERVK -44 533 1 4 1517 21 36 0 0 chrX 122243068 122243096 -44407200 + AT_rich Low_complexity Low_complexity 1 28 0 4 1517 246 372 47 16 chrX 122243201 122243392 -44406904 + HAL1 LINE L1 170 366 -2141 4 1517 200 211 0 0 chrX 122243826 122243864 -44406432 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 4 1517 189 0 0 0 chrX 122244008 122244029 -44406267 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1517 1583 99 7 10 chrX 122244310 122244545 -44405751 + RLTR13A LTR ERVK 1 231 -752 4 1517 32302 38 0 1 chrX 122244545 122249182 -44401114 - L1Md_T LINE L1 -43 6539 1908 4 1517 1734 94 18 36 chrX 122249182 122249458 -44400838 + RLTR13A LTR ERVK 84 354 -501 4 1517 21 71 0 0 chrX 122249482 122249524 -44400772 + AT_rich Low_complexity Low_complexity 1 42 0 4 1517 270 178 0 0 chrX 122249655 122249700 -44400596 + L1_Mur3 LINE L1 3480 3524 -2356 4 1517 297 345 11 0 chrX 122249758 122249845 -44400451 - RSINE1 SINE B4 -10 155 68 4 1517 337 293 54 54 chrX 122249849 122250033 -44400263 + L1M2 LINE L1 3738 3921 -2222 4 1517 2494 174 14 53 chrX 122250035 122250607 -44399689 - Lx2B LINE L1 -673 6300 5766 4 1517 394 0 60 15 chrX 122250608 122250675 -44399621 + (TTTTTG)n Simple_repeat Simple_repeat 3 72 0 4 1517 680 129 0 0 chrX 122250676 122250777 -44399519 - B1_Mus2 SINE Alu 0 147 47 4 1517 301 222 0 40 chrX 122250725 122250800 -44399496 - RLTR25B LTR ERVK -530 498 427 4 1517 2924 198 39 14 chrX 122250801 122251435 -44398861 - Lx2B LINE L1 -133 5753 5104 4 1517 2433 197 52 16 chrX 122251426 122251926 -44398370 + Lx2B LINE L1 6477 6994 -6 5 1517 365 337 115 73 chrX 122252027 122252069 -44398227 - MT2A LTR ERVL -1 600 546 5 1517 417 20 0 0 chrX 122252069 122252119 -44398177 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1517 902 280 105 31 chrX 122252119 122252505 -44397791 - MT2A LTR ERVL -56 545 1 5 1517 255 346 0 0 chrX 122252824 122252905 -44397391 + ORR1D2 LTR MaLR 6 86 -284 5 1517 2212 56 0 7 chrX 122252987 122253274 -44397022 + L1Md_F2 LINE L1 6298 6582 0 5 1517 5095 111 8 5 chrX 122253284 122254035 -44396261 + L1_Mm LINE L1 4951 5703 -180 5 1517 2627 139 24 24 chrX 122254031 122254354 -44395942 - Lx3_Mus LINE L1 -769 6240 5913 5 1517 216 0 0 0 chrX 122254354 122254378 -44395918 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1517 2627 139 24 24 chrX 122254378 122254512 -44395784 - Lx3_Mus LINE L1 -1097 5912 5783 5 1517 525 293 58 54 chrX 122255260 122255649 -44394647 - MuLV-int LTR ERV1 -147 7459 7115 5 1517 636 138 29 25 chrX 122257146 122257291 -44393005 - RMER17D2 LTR ERVK -10 896 703 5 1517 1047 118 0 79 chrX 122257295 122257498 -44392798 - Lx3C LINE L1 -901 6075 5889 5 1517 24 53 0 0 chrX 122257580 122257618 -44392678 + AT_rich Low_complexity Low_complexity 1 38 0 5 1517 1143 263 18 21 chrX 122257717 122257997 -44392299 - ORR1B1 LTR MaLR 0 394 116 5 1517 2746 270 64 17 chrX 122258000 122258987 -44391309 + RMER1B Other Other 106 1062 -4 5 1517 354 91 0 0 chrX 122259256 122259311 -44390985 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1517 465 250 85 20 chrX 122259912 122260112 -44390184 - L1MD3 LINE L1 -10 7985 7773 5 1517 915 243 146 52 chrX 122260177 122260241 -44390055 - ORR1D2 LTR MaLR 0 394 305 5 1517 188 34 0 33 chrX 122260241 122260271 -44390025 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 5 1517 915 244 147 55 chrX 122260271 122260555 -44389741 - ORR1D2 LTR MaLR -79 315 24 5 1517 882 54 0 0 chrX 122260651 122260763 -44389533 + (TTCC)n Simple_repeat Simple_repeat 2 113 0 5 1517 518 309 37 0 chrX 122260879 122261015 -44389281 + RSINE1 SINE B4 3 143 -22 5 1517 666 58 0 0 chrX 122261039 122261126 -44389170 + (CA)n Simple_repeat Simple_repeat 1 87 0 5 1517 248 53 26 0 chrX 122261126 122261164 -44389132 + (CCA)n Simple_repeat Simple_repeat 3 41 0 5 1517 224 188 0 20 chrX 122261179 122261216 -44389080 + polypurine Low_complexity Low_complexity 1 36 0 5 1517 282 87 0 0 chrX 122261216 122261262 -44389034 + (CAGAGA)n Simple_repeat Simple_repeat 2 47 0 5 1517 224 188 0 20 chrX 122261262 122261273 -44389023 + polypurine Low_complexity Low_complexity 37 47 0 5 1517 1849 189 3 8 chrX 122261305 122261688 -44388608 - Lx2 LINE L1 -713 6284 5904 5 1517 748 182 0 7 chrX 122261688 122261843 -44388453 + Lx2 LINE L1 6844 6997 0 5 1517 1166 254 57 83 chrX 122261859 122262246 -44388050 + ORR1C2 LTR MaLR 8 384 0 5 1517 197 108 0 26 chrX 122263068 122263106 -44387190 + (CATA)n Simple_repeat Simple_repeat 4 40 0 5 1517 768 22 0 0 chrX 122263298 122263388 -44386908 + (TTC)n Simple_repeat Simple_repeat 2 91 0 5 1517 653 68 0 0 chrX 122263388 122263476 -44386820 - B1_Mus2 SINE Alu -58 89 2 5 1517 431 325 16 24 chrX 122263709 122263832 -44386464 + B3 SINE B2 2 123 -93 5 1517 813 171 26 7 chrX 122263855 122264008 -44386288 + Lx2B LINE L1 6156 6311 -689 5 1517 1512 250 61 26 chrX 122264000 122264456 -44385840 + Lx2B LINE L1 6524 6995 -5 5 1517 22 0 0 0 chrX 122265078 122265100 -44385196 + AT_rich Low_complexity Low_complexity 1 22 0 5 1517 297 125 0 0 chrX 122265493 122265549 -44384747 + (TTTTTG)n Simple_repeat Simple_repeat 6 61 0 5 1517 329 239 0 32 chrX 122265549 122265644 -44384652 + RNLTR23 LTR ERVK 551 642 0 5 1517 564 322 98 20 chrX 122266560 122266804 -44383492 + Lx7 LINE L1 7036 7298 -398 5 1517 432 55 0 0 chrX 122266843 122266898 -44383398 + (TC)n Simple_repeat Simple_repeat 1 55 0 5 1517 529 76 22 0 chrX 122266898 122266990 -44383306 + (TG)n Simple_repeat Simple_repeat 1 94 0 5 1517 246 128 0 0 chrX 122267057 122267096 -44383200 + (GA)n Simple_repeat Simple_repeat 2 40 0 5 1517 2820 61 56 3 chrX 122267512 122267888 -44382408 - MTA_Mm LTR MaLR 0 396 1 5 1517 23 33 0 0 chrX 122268631 122268661 -44381635 + AT_rich Low_complexity Low_complexity 1 30 0 5 1517 439 244 34 75 chrX 122268740 122268886 -44381410 + Lx9 LINE L1 6962 7101 -543 5 1517 374 315 74 10 chrX 122268936 122269138 -44381158 + Lx9 LINE L1 7225 7439 -205 5 1517 405 0 0 0 chrX 122269155 122269200 -44381096 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1517 30 27 0 0 chrX 122269296 122269333 -44380963 + AT_rich Low_complexity Low_complexity 1 37 0 5 1517 930 319 32 30 chrX 122269512 122269941 -44380355 + MTE2a-int LTR MaLR 37 587 -993 5 1517 1687 313 153 39 chrX 122269954 122270705 -44379591 + MTE2a-int LTR MaLR 743 1579 -1 5 1517 737 313 35 100 chrX 122270706 122271075 -44379221 + MTE2a LTR MaLR 1 345 -34 5 1517 204 122 0 0 chrX 122271170 122271211 -44379085 + (T)n Simple_repeat Simple_repeat 1 41 0 5 1517 530 29 0 14 chrX 122271265 122271334 -44378962 + (TTA)n Simple_repeat Simple_repeat 3 70 0 5 1517 390 372 14 20 chrX 122271340 122271488 -44378808 - RSINE1 SINE B4 -15 150 4 5 1517 281 82 20 0 chrX 122271504 122271553 -44378743 + (TTTTTG)n Simple_repeat Simple_repeat 3 52 0 5 1517 783 261 36 31 chrX 122271564 122271786 -44378510 - MTD LTR MaLR -194 225 3 5 1517 638 308 19 9 chrX 122271873 122272083 -44378213 + ID_B1 SINE B4 4 215 -9 5 1517 315 0 0 0 chrX 122272413 122272448 -44377848 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1517 210 412 108 0 chrX 122272450 122272552 -44377744 - B3A SINE B2 -17 181 69 5 1517 441 239 11 0 chrX 122272780 122272868 -44377428 - ID_B1 SINE B4 -1 223 135 5 1517 21 0 0 0 chrX 122273732 122273753 -44376543 + AT_rich Low_complexity Low_complexity 1 21 0 5 1517 308 24 24 0 chrX 122273886 122273927 -44376369 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1517 440 33 0 32 chrX 122273976 122274039 -44376257 + (TTTA)n Simple_repeat Simple_repeat 1 61 0 5 1517 8209 140 22 25 chrX 122274042 122274999 -44375297 - Lx3A LINE L1 -6 6975 6038 5 1517 210 37 0 0 chrX 122274999 122275026 -44375270 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 5 1517 8209 140 35 24 chrX 122275026 122276163 -44374133 - Lx3A LINE L1 -944 6037 4849 5 1517 558 0 0 0 chrX 122276163 122276225 -44374071 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 1517 6697 140 42 23 chrX 122276225 122276409 -44373887 - Lx3A LINE L1 -1038 4848 4682 5 1517 227 283 130 65 chrX 122276410 122276610 -44373686 - RMER12 LTR ERVK -9 1313 1101 5 1517 327 113 0 0 chrX 122276845 122276907 -44373389 + (A)n Simple_repeat Simple_repeat 1 62 0 5 1517 2011 123 8 28 chrX 122276912 122277276 -44373020 - RLTR22_Mus LTR ERVK -983 825 354 5 1517 410 113 0 14 chrX 122277279 122277351 -44372945 - L1_Mm LINE L1 -2152 3731 3661 5 1517 552 146 0 0 chrX 122277356 122277452 -44372844 + L1_Mus2 LINE L1 2128 2223 -3660 5 1517 4207 93 4 0 chrX 122277452 122278012 -44372284 + IAPEY3-int LTR ERVK 1421 1982 -5698 5 1517 3133 85 11 0 chrX 122277989 122278436 -44371860 + IAPEY3-int LTR ERVK 2238 2689 -4991 5 1517 475 34 0 0 chrX 122278429 122278488 -44371808 + IAPEY3-int LTR ERVK 4852 4910 -2770 5 1517 3829 117 21 7 chrX 122278488 122279097 -44371199 + IAPEy-int LTR ERVK 6896 7513 0 5 1517 3032 45 0 0 chrX 122279097 122279454 -44370842 + IAPEY2_LTR LTR ERVK 1 357 0 5 1517 8129 108 2 3 chrX 122279455 122281399 -44368897 + L1_Mus2 LINE L1 4623 6566 0 5 1517 576 51 0 0 chrX 122281402 122281480 -44368816 - RLTR22_Mus LTR ERVK -1437 371 294 5 1517 207 100 0 0 chrX 122281480 122281510 -44368786 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 5 1517 1887 137 3 7 chrX 122282014 122282316 -44367980 - RLTR22_Mus LTR ERVK -1505 303 3 5 1517 11085 143 33 12 chrX 122282318 122282906 -44367390 - L1_Mur1 LINE L1 -1184 4702 4123 5 1517 333 0 0 0 chrX 122282906 122282943 -44367353 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1517 11085 143 33 12 chrX 122282943 122284501 -44365795 - L1_Mur1 LINE L1 -1764 4122 2510 5 1517 1530 197 54 88 chrX 122284501 122284908 -44365388 - RLTR9C LTR ERVK 0 393 1 5 1517 456 92 0 26 chrX 122284912 122284990 -44365306 - ETnERV2-int LTR ERVK -4 7402 7327 5 1517 953 200 8 59 chrX 122285200 122285786 -44364510 - ETnERV2-int LTR ERVK -1703 3141 2901 5 1517 755 110 9 14 chrX 122285795 122285924 -44364372 + IAPLTR2b LTR ERVK 1 151 -206 5 1517 4168 110 68 55 chrX 122285924 122286768 -44363528 + IAPEz-int LTR ERVK 211 995 -5486 5 1517 408 70 0 0 chrX 122286768 122286825 -44363471 + B1_Mus1 SINE Alu 1 57 -91 5 1517 1807 67 4 0 chrX 122286830 122287069 -44363227 + IAPEY3-int LTR ERVK 2258 2497 -5183 5 1517 12739 79 15 9 chrX 122287068 122288882 -44361414 + IAPEz-int LTR ERVK 4656 6481 0 5 1517 2524 57 35 0 chrX 122288882 122289196 -44361100 + IAPLTR2b LTR ERVK 1 325 -2 5 189 3708 187 40 32 chrX 122289196 122290648 -44359648 - ETnERV2-int LTR ERVK -3321 4085 2357 5 1518 900 152 0 18 chrX 122291208 122291376 -44358920 - RLTR13D1 LTR ERVK -156 650 486 5 1518 2195 198 22 20 chrX 122291376 122291877 -44358419 - ETnERV2-int LTR ERVK -4409 2997 2496 5 1518 3845 193 27 108 chrX 122291904 122293166 -44357130 - MMETn-int LTR ERVK -3675 1169 10 5 1518 699 228 55 61 chrX 122293175 122293422 -44356874 - RLTR9E LTR ERVK -7 430 143 5 1518 3358 135 20 0 chrX 122293757 122294356 -44355940 - L1_Mur1 LINE L1 -3847 2039 1429 5 1518 226 67 22 22 chrX 122296155 122296201 -44354095 + (CAAAAA)n Simple_repeat Simple_repeat 4 49 0 5 1518 269 98 60 24 chrX 122296306 122296390 -44353906 + T-rich Low_complexity Low_complexity 3 89 0 5 1518 406 325 78 68 chrX 122296391 122296800 -44353496 - L1MD LINE L1 -2666 3480 3068 5 1518 22 70 0 0 chrX 122297333 122297376 -44352920 + AT_rich Low_complexity Low_complexity 1 43 0 5 1518 344 39 0 143 chrX 122297749 122297840 -44352456 + T-rich Low_complexity Low_complexity 1 78 0 5 1518 507 45 0 0 chrX 122297953 122298019 -44352277 + (TG)n Simple_repeat Simple_repeat 2 67 0 5 1518 192 40 0 0 chrX 122298289 122298314 -44351982 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 5 1518 191 61 0 29 chrX 122298375 122298409 -44351887 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 1518 222 37 0 0 chrX 122298524 122298551 -44351745 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 5 1518 363 98 0 0 chrX 122298764 122298825 -44351471 + (T)n Simple_repeat Simple_repeat 1 61 0 5 1518 194 0 39 0 chrX 122299049 122299075 -44351221 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 5 1518 1039 102 0 0 chrX 122299075 122299222 -44351074 - B1_Mus1 SINE Alu 0 148 2 5 1518 211 159 0 104 chrX 122299303 122299380 -44350916 + A-rich Low_complexity Low_complexity 3 71 0 5 1518 225 146 0 0 chrX 122299537 122299585 -44350711 + (T)n Simple_repeat Simple_repeat 1 48 0 5 1518 1155 48 7 0 chrX 122299587 122299732 -44350564 - B1_Mus2 SINE Alu 0 147 2 5 1518 27 49 0 0 chrX 122299949 122299990 -44350306 + AT_rich Low_complexity Low_complexity 1 41 0 5 1518 204 40 0 0 chrX 122300856 122300881 -44349415 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 5 1518 1058 77 14 0 chrX 122300881 122301024 -44349272 - B1_Mus1 SINE Alu -2 146 2 5 1518 22 0 0 0 chrX 122301059 122301081 -44349215 + AT_rich Low_complexity Low_complexity 1 22 0 5 1518 207 0 0 0 chrX 122301129 122301152 -44349144 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 5 1518 380 20 0 20 chrX 122301193 122301243 -44349053 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 5 1518 951 63 0 0 chrX 122301243 122301369 -44348927 - B1_Mus2 SINE Alu -10 137 12 6 1518 200 254 26 26 chrX 122301405 122301518 -44348778 + A-rich Low_complexity Low_complexity 2 114 0 6 1518 249 33 0 0 chrX 122301598 122301628 -44348668 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 6 1518 198 67 43 22 chrX 122301729 122301775 -44348521 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 6 1518 195 114 0 0 chrX 122302008 122302043 -44348253 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 6 1518 219 69 0 0 chrX 122302078 122302107 -44348189 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1518 225 0 0 0 chrX 122302422 122302447 -44347849 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 6 1518 250 257 0 87 chrX 122302537 122302733 -44347563 + T-rich Low_complexity Low_complexity 2 180 0 6 1518 303 270 54 90 chrX 122303246 122303413 -44346883 - L1MDa LINE L1 -4132 2501 2341 6 1518 21 36 0 0 chrX 122303595 122303623 -44346673 + AT_rich Low_complexity Low_complexity 1 28 0 6 1518 288 0 0 0 chrX 122303855 122303887 -44346409 + (T)n Simple_repeat Simple_repeat 1 32 0 6 1518 234 184 0 0 chrX 122303927 122303976 -44346320 + T-rich Low_complexity Low_complexity 1 49 0 6 1518 23 68 0 0 chrX 122304160 122304204 -44346092 + AT_rich Low_complexity Low_complexity 1 44 0 6 1518 23 0 0 0 chrX 122304343 122304366 -44345930 + AT_rich Low_complexity Low_complexity 1 23 0 6 1518 21 0 0 0 chrX 122304388 122304409 -44345887 + AT_rich Low_complexity Low_complexity 1 21 0 6 1518 23 97 0 0 chrX 122304548 122304620 -44345676 + AT_rich Low_complexity Low_complexity 1 72 0 6 1518 261 57 0 0 chrX 122304710 122304745 -44345551 + (T)n Simple_repeat Simple_repeat 1 35 0 6 1518 360 0 0 0 chrX 122304889 122304929 -44345367 + (TAA)n Simple_repeat Simple_repeat 1 40 0 6 1518 276 244 23 41 chrX 122305540 122305711 -44344585 + (TATAA)n Simple_repeat Simple_repeat 3 170 0 6 1518 770 153 20 46 chrX 122305858 122306009 -44344287 - B1_Mus1 SINE Alu 0 148 2 6 1518 1280 73 6 0 chrX 122306192 122306369 -44343927 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 6 1518 458 321 86 15 chrX 122306369 122306638 -44343658 - L1MC4 LINE L1 -4988 1227 940 6 1518 891 122 14 7 chrX 122306639 122306779 -44343517 - B1_Mus1 SINE Alu -6 142 2 6 1518 235 225 0 14 chrX 122306785 122306857 -44343439 + A-rich Low_complexity Low_complexity 3 73 0 6 1518 735 182 6 12 chrX 122307095 122307262 -44343034 + CT-rich Low_complexity Low_complexity 3 168 0 6 1518 219 169 16 33 chrX 122307270 122307331 -44342965 + T-rich Low_complexity Low_complexity 1 60 0 6 1518 891 122 14 7 chrX 122307333 122307473 -44342823 - B1_Mus1 SINE Alu -6 142 2 6 1518 226 281 6 57 chrX 122307479 122307656 -44342640 + A-rich Low_complexity Low_complexity 3 170 0 6 1518 773 176 6 17 chrX 122307796 122307975 -44342321 + CT-rich Low_complexity Low_complexity 2 178 0 6 1518 789 185 7 0 chrX 122307977 122308123 -44342173 - B1_Mus1 SINE Alu 0 148 2 6 1518 24 0 0 0 chrX 122308157 122308181 -44342115 + AT_rich Low_complexity Low_complexity 1 24 0 6 1518 255 130 0 0 chrX 122308233 122308287 -44342009 + (A)n Simple_repeat Simple_repeat 1 54 0 6 1518 198 91 0 0 chrX 122308339 122308372 -44341924 + (A)n Simple_repeat Simple_repeat 1 33 0 6 1518 320 70 27 40 chrX 122308520 122308595 -44341701 + (TTTTG)n Simple_repeat Simple_repeat 1 74 0 6 1518 841 170 0 0 chrX 122308597 122308738 -44341558 - B1_Mus1 SINE Alu -6 142 2 6 1518 384 235 12 40 chrX 122308753 122308926 -44341370 + A-rich Low_complexity Low_complexity 1 168 0 6 1518 238 26 51 0 chrX 122308942 122308981 -44341315 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 6 1518 23 0 0 0 chrX 122309026 122309049 -44341247 + AT_rich Low_complexity Low_complexity 1 23 0 6 1518 730 55 36 0 chrX 122309081 122309191 -44341105 + (TTTC)n Simple_repeat Simple_repeat 2 115 0 6 1518 793 175 7 0 chrX 122309204 122309341 -44340955 - B1_Mus1 SINE Alu -8 140 3 6 1518 712 134 7 7 chrX 122309669 122309804 -44340492 + (TTTC)n Simple_repeat Simple_repeat 2 136 0 6 1518 864 129 14 0 chrX 122309809 122309948 -44340348 - B1_Mus1 SINE Alu -6 142 2 6 1518 28 0 0 0 chrX 122310041 122310069 -44340227 + AT_rich Low_complexity Low_complexity 1 28 0 6 1518 198 0 0 0 chrX 122310161 122310183 -44340113 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 6 1518 216 0 0 0 chrX 122310239 122310263 -44340033 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1518 902 141 0 6 chrX 122310326 122310483 -44339813 + (TTTC)n Simple_repeat Simple_repeat 2 157 0 6 1518 790 168 14 0 chrX 122310483 122310626 -44339670 - B1_Mus1 SINE Alu 0 148 4 6 1518 206 232 0 0 chrX 122310664 122310720 -44339576 + A-rich Low_complexity Low_complexity 1 56 0 6 1518 270 293 0 0 chrX 122313150 122313232 -44337064 - MurSAT1 Satellite Satellite -38 82 1 6 1518 232 330 5 5 chrX 122313729 122313872 -44336424 - MurSAT1 Satellite Satellite -2 143 1 6 1518 267 282 6 6 chrX 122314277 122314386 -44335910 - MurSAT1 Satellite Satellite -10 109 1 6 1518 257 357 0 0 chrX 122314823 122314921 -44335375 - MurSAT1 Satellite Satellite -22 98 1 6 1518 345 285 23 23 chrX 122315162 122315449 -44334847 - MurSAT1 Satellite Satellite -1 287 1 6 1518 255 336 0 0 chrX 122315853 122315962 -44334334 - MurSAT1 Satellite Satellite -4 116 1 6 1518 250 319 9 9 chrX 122316587 122316701 -44333595 - MurSAT1 Satellite Satellite -1 119 6 6 1518 287 315 11 11 chrX 122316737 122316867 -44333429 - MurSAT1 Satellite Satellite -1 130 1 6 1518 245 163 0 0 chrX 122317190 122317233 -44333063 - MurSAT1 Satellite Satellite -28 92 50 6 1518 245 163 0 0 chrX 122317571 122317614 -44332682 - MurSAT1 Satellite Satellite -28 92 50 6 1518 263 272 24 24 chrX 122318333 122318416 -44331880 - MurSAT1 Satellite Satellite -28 92 10 6 1518 256 326 16 5 chrX 122319895 122320066 -44330230 - MurSAT1 Satellite Satellite -27 172 1 6 1518 266 330 0 0 chrX 122320536 122320633 -44329663 - MurSAT1 Satellite Satellite -23 97 1 6 1518 287 281 41 10 chrX 122321032 122321129 -44329167 - MurSAT1 Satellite Satellite -14 106 7 6 1518 296 313 15 5 chrX 122322193 122322369 -44327927 - MurSAT1 Satellite Satellite -27 177 1 6 1518 259 306 10 10 chrX 122322832 122322931 -44327365 - MurSAT1 Satellite Satellite -21 99 1 6 1518 277 262 35 12 chrX 122323342 122323427 -44326869 - MurSAT1 Satellite Satellite -27 93 7 6 1518 244 312 10 10 chrX 122323983 122324080 -44326216 - MurSAT1 Satellite Satellite -23 97 1 6 1518 281 313 15 5 chrX 122324491 122324667 -44325629 - MurSAT1 Satellite Satellite -27 177 1 6 1518 296 308 15 5 chrX 122325640 122325816 -44324480 - MurSAT1 Satellite Satellite -27 177 1 6 1518 253 302 10 10 chrX 122326281 122326378 -44323918 - MurSAT1 Satellite Satellite -23 97 1 6 1518 296 316 16 5 chrX 122326794 122326965 -44323331 - MurSAT1 Satellite Satellite -32 172 1 6 1518 225 307 11 11 chrX 122327430 122327519 -44322777 - MurSAT1 Satellite Satellite -23 97 9 6 1518 284 313 15 5 chrX 122327938 122328114 -44322182 - MurSAT1 Satellite Satellite -27 177 1 6 1518 284 323 15 5 chrX 122329087 122329263 -44321033 - MurSAT1 Satellite Satellite -27 177 1 6 1518 269 323 26 13 chrX 122330256 122330431 -44319865 - MurSAT1 Satellite Satellite -2 177 1 6 1518 338 289 0 0 chrX 122330886 122330983 -44319313 - MurSAT1 Satellite Satellite -23 97 1 6 1518 286 295 10 5 chrX 122331314 122331457 -44318839 - MurSAT1 Satellite Satellite -21 143 1 6 1518 320 325 11 11 chrX 122331659 122331863 -44318433 - MurSAT1 Satellite Satellite -1 204 1 6 1518 228 315 35 35 chrX 122331903 122332018 -44318278 - MurSAT1 Satellite Satellite -5 115 1 6 1518 256 326 9 9 chrX 122332425 122332557 -44317739 - MurSAT1 Satellite Satellite -11 132 1 6 1518 265 24 23 23 chrX 122338664 122338707 -44311589 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 6 1518 2942 118 7 0 chrX 122338878 122339311 -44310985 + L1_Mus3 LINE L1 6197 6632 -6 6 1518 1266 40 17 11 chrX 122340062 122340239 -44310057 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 6 1518 704 94 0 9 chrX 122340239 122340346 -44309950 + (TTCC)n Simple_repeat Simple_repeat 1 106 0 6 1518 592 162 210 19 chrX 122340346 122340503 -44309793 - B2_Mm2 SINE B2 -8 187 1 6 1518 337 127 12 12 chrX 122345096 122345176 -44305120 + (TATG)n Simple_repeat Simple_repeat 1 80 0 6 1518 252 239 0 14 chrX 122345179 122345251 -44305045 + CT-rich Low_complexity Low_complexity 1 71 0 6 1518 536 246 59 18 chrX 122345286 122345456 -44304840 + ORR1B2 LTR MaLR 1 177 -190 6 1518 2028 211 57 76 chrX 122345521 122345594 -44304702 - RLTR21 LTR ERVK -368 1204 1131 6 1518 336 24 0 0 chrX 122345594 122345635 -44304661 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1518 2028 211 57 76 chrX 122345635 122346229 -44304067 - RLTR21 LTR ERVK -442 1130 550 6 1518 1319 221 20 78 chrX 122346266 122346610 -44303686 - RLTR21 LTR ERVK -1248 324 1 6 1518 237 292 0 40 chrX 122346978 122347103 -44303193 - Lx6 LINE L1 -17 7443 7324 6 1518 304 320 41 50 chrX 122347104 122347324 -44302972 - Lx6 LINE L1 -1338 6122 5905 6 1518 2108 195 24 31 chrX 122347330 122347513 -44302783 - MTC LTR MaLR 0 421 237 6 1518 6299 107 6 1 chrX 122347513 122348402 -44301894 + RLTR13B1 LTR ERVK 1 893 0 6 1518 2108 195 24 31 chrX 122348402 122348642 -44301654 - MTC LTR MaLR -185 236 1 6 1518 779 240 35 46 chrX 122348645 122348929 -44301367 - Lx7 LINE L1 -1796 5900 5620 6 1518 883 209 41 34 chrX 122348949 122349242 -44301054 - L1_Mur3 LINE L1 -2593 3287 2993 6 1518 5856 108 3 2 chrX 122349247 122350139 -44300157 - L1_Mus2 LINE L1 0 6566 5674 6 1518 3496 36 0 0 chrX 122350140 122350615 -44299681 - L1Md_F3 LINE L1 -562 6022 5548 6 1518 4353 58 0 2 chrX 122350615 122351165 -44299131 + L1Md_F3 LINE L1 6034 6582 -2 6 1518 770 181 7 0 chrX 122351168 122351306 -44298990 - L1_Mm LINE L1 -198 5685 5547 6 1518 4793 95 15 12 chrX 122351337 122352733 -44297563 + L1Md_F LINE L1 505 1904 -3979 6 1518 442 315 20 10 chrX 122353137 122353336 -44296960 - Lx8 LINE L1 -941 6532 6332 6 1518 333 284 60 27 chrX 122353680 122353957 -44296339 - Lx8 LINE L1 -175 5672 5401 6 1518 2897 255 44 15 chrX 122353966 122354718 -44295578 + ORR1D-int LTR MaLR 455 1228 -142 6 1518 407 146 73 0 chrX 122354840 122354922 -44295374 + MERVL_2A-int LTR ERVL 5674 5761 0 6 1518 552 244 7 44 chrX 122354922 122355059 -44295237 + MT2A LTR ERVL 1 132 -401 6 1518 1742 196 12 0 chrX 122355174 122355516 -44294780 - Lx7 LINE L1 -694 7002 6657 6 1518 461 278 29 83 chrX 122355511 122355524 -44294772 + Lx7 LINE L1 7305 7317 -379 6 1518 2218 109 16 3 chrX 122355524 122355847 -44294449 + ORR1A2 LTR MaLR 1 327 0 7 1518 461 278 29 83 chrX 122355847 122356217 -44294079 + Lx7 LINE L1 7318 7667 -29 6 1518 6374 243 35 114 chrX 122356215 122360703 -44289593 - Lx5 LINE L1 -19 7031 2881 7 1518 360 305 34 41 chrX 122360703 122360850 -44289446 - RLTR22_Mur LTR ERVK -73 1249 1104 7 1518 957 282 116 80 chrX 122360996 122361801 -44288495 - RLTR22_Mur LTR ERVK -1046 802 1 7 1518 690 303 8 17 chrX 122361801 122362163 -44288133 - Lx5 LINE L1 -6466 1262 904 7 1518 338 312 68 82 chrX 122362666 122362872 -44287424 - MTE2a LTR MaLR -10 369 167 7 1518 6721 53 5 0 chrX 122362878 122363765 -44286531 - L1Md_F3 LINE L1 -14 6570 5680 7 1518 364 282 76 61 chrX 122363765 122363897 -44286399 - MTE2a LTR MaLR -181 198 65 7 1518 991 117 7 0 chrX 122363924 122364069 -44286227 - B1_Mm SINE Alu 0 147 2 7 1518 239 159 0 0 chrX 122364109 122364153 -44286143 - MTE2a LTR MaLR -330 49 6 7 1518 1248 277 84 20 chrX 122364224 122364567 -44285729 + ORR1D1 LTR MaLR 9 373 -1 7 1518 1935 239 76 37 chrX 122365035 122365548 -44284748 - RLTR20B3 LTR ERVK -44 533 1 7 1518 21 36 0 0 chrX 122365581 122365609 -44284687 + AT_rich Low_complexity Low_complexity 1 28 0 7 1518 227 383 24 12 chrX 122365741 122365905 -44284391 + HAL1 LINE L1 201 366 -2141 7 1518 200 211 0 0 chrX 122366339 122366377 -44283919 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 7 1518 216 0 0 0 chrX 122366521 122366545 -44283751 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1518 1582 106 9 16 chrX 122366826 122367084 -44283212 + RLTR13A LTR ERVK 1 251 -651 7 1518 30797 38 0 1 chrX 122367084 122371699 -44278597 - L1Md_T LINE L1 -66 6516 1908 7 1518 1699 98 18 36 chrX 122371699 122371975 -44278321 + RLTR13A LTR ERVK 84 354 -501 7 1518 21 71 0 0 chrX 122371999 122372041 -44278255 + AT_rich Low_complexity Low_complexity 1 42 0 7 1518 254 178 0 0 chrX 122372171 122372216 -44278080 + L1_Mur3 LINE L1 3480 3524 -2356 7 1518 301 345 11 0 chrX 122372274 122372361 -44277935 - RSINE1 SINE B4 -10 155 68 7 1518 337 293 54 54 chrX 122372365 122372549 -44277747 + L1M2 LINE L1 3738 3921 -2222 7 1518 2337 168 12 47 chrX 122372556 122373063 -44277233 - Lx2B LINE L1 -708 6292 5804 7 1518 443 0 44 15 chrX 122373125 122373193 -44277103 + (TTTTTG)n Simple_repeat Simple_repeat 3 72 0 7 1518 698 119 0 0 chrX 122373194 122373295 -44277001 - B1_Mus2 SINE Alu 0 147 47 7 1518 303 214 88 104 chrX 122373221 122373346 -44276950 - MT2B LTR ERVL -325 276 154 7 1518 2584 200 41 15 chrX 122373347 122373955 -44276341 - Lx2B LINE L1 -159 5727 5104 7 1518 2275 195 52 16 chrX 122373946 122374446 -44275850 + Lx2B LINE L1 6477 6994 -6 7 1518 363 344 115 70 chrX 122374547 122374588 -44275708 - MT2A LTR ERVL -1 600 547 7 1518 588 14 0 0 chrX 122374588 122374657 -44275639 + (TG)n Simple_repeat Simple_repeat 2 70 0 7 1518 899 282 105 30 chrX 122374657 122375043 -44275253 - MT2A LTR ERVL -55 546 1 7 1518 250 346 0 0 chrX 122375362 122375443 -44274853 + ORR1D2 LTR MaLR 6 86 -284 7 1518 2238 60 0 0 chrX 122375525 122375810 -44274486 + L1Md_F2 LINE L1 6298 6582 0 7 1518 4849 110 8 5 chrX 122375827 122376577 -44273719 + L1_Mm LINE L1 4952 5703 -180 7 1518 2469 137 26 26 chrX 122376573 122376896 -44273400 - Lx3_Mus LINE L1 -769 6240 5913 7 1518 216 0 0 0 chrX 122376896 122376920 -44273376 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1518 2469 137 26 26 chrX 122376920 122377054 -44273242 - Lx3_Mus LINE L1 -1097 5912 5783 7 1518 452 308 57 55 chrX 122377837 122378187 -44272109 - MuRRS4-int LTR ERV1 -224 4839 4561 7 1518 652 138 29 25 chrX 122379686 122379831 -44270465 - RMER17D2 LTR ERVK -10 896 703 7 1518 974 118 0 88 chrX 122379835 122380040 -44270256 - Lx3C LINE L1 -901 6075 5889 7 1518 24 53 0 0 chrX 122380122 122380160 -44270136 + AT_rich Low_complexity Low_complexity 1 38 0 7 1518 1141 266 18 21 chrX 122380259 122380539 -44269757 - ORR1B1 LTR MaLR 0 394 116 7 1518 849 288 49 35 chrX 122380542 122380887 -44269409 + RMER1A Other Other 106 455 -575 7 1518 2532 254 58 7 chrX 122380855 122381529 -44268767 + RMER1B Other Other 355 1062 -4 7 1518 246 116 0 0 chrX 122381799 122381842 -44268454 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1518 259 355 91 27 chrX 122382043 122382153 -44268143 + PB1 SINE Alu 6 122 -5 7 1518 418 250 85 20 chrX 122382443 122382643 -44267653 - L1MD3 LINE L1 -10 7985 7773 7 1518 926 243 146 52 chrX 122382708 122382772 -44267524 - ORR1D2 LTR MaLR 0 394 305 7 1518 188 34 0 33 chrX 122382772 122382802 -44267494 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 7 1518 926 244 147 55 chrX 122382802 122383086 -44267210 - ORR1D2 LTR MaLR -79 315 24 7 1518 918 52 0 0 chrX 122383182 122383298 -44266998 + (TTCC)n Simple_repeat Simple_repeat 2 117 0 7 1518 524 309 37 0 chrX 122383414 122383550 -44266746 + RSINE1 SINE B4 3 143 -22 7 1518 666 58 0 0 chrX 122383574 122383661 -44266635 + (CA)n Simple_repeat Simple_repeat 1 87 0 7 1518 248 53 26 0 chrX 122383661 122383699 -44266597 + (CCA)n Simple_repeat Simple_repeat 3 41 0 7 1518 224 188 0 20 chrX 122383714 122383751 -44266545 + polypurine Low_complexity Low_complexity 1 36 0 7 1518 282 87 0 0 chrX 122383751 122383797 -44266499 + (CAGAGA)n Simple_repeat Simple_repeat 2 47 0 7 1518 224 188 0 20 chrX 122383797 122383808 -44266488 + polypurine Low_complexity Low_complexity 37 47 0 7 1518 1730 189 3 8 chrX 122383840 122384223 -44266073 - Lx2 LINE L1 -713 6284 5904 7 1518 749 182 0 7 chrX 122384223 122384378 -44265918 + Lx2 LINE L1 6844 6997 0 7 1518 1160 254 57 83 chrX 122384394 122384781 -44265515 + ORR1C2 LTR MaLR 8 384 0 7 1518 197 108 0 26 chrX 122385603 122385641 -44264655 + (CATA)n Simple_repeat Simple_repeat 4 40 0 7 1518 1011 17 0 0 chrX 122385833 122385950 -44264346 + (TTC)n Simple_repeat Simple_repeat 2 118 0 7 1518 666 68 0 0 chrX 122385950 122386038 -44264258 - B1_Mus2 SINE Alu -58 89 2 7 1518 433 325 16 24 chrX 122386271 122386394 -44263902 + B3 SINE B2 2 123 -93 7 1519 2837 86 13 10 chrX 122436442 122436830 -44213466 + L1_Mm LINE L1 5315 5703 -180 7 1519 2650 134 26 26 chrX 122436826 122437149 -44213147 - Lx3_Mus LINE L1 -769 6240 5913 7 1519 216 0 0 0 chrX 122437149 122437173 -44213123 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1519 2650 158 28 43 chrX 122437173 122437335 -44212961 - Lx3_Mus LINE L1 -1097 5912 5771 7 1519 560 293 58 54 chrX 122438055 122438444 -44211852 - MuRRS4-int LTR ERV1 -224 4839 4561 7 1519 665 138 29 25 chrX 122439941 122440086 -44210210 - RMER17D2 LTR ERVK -10 896 703 7 1519 1059 118 0 79 chrX 122440090 122440293 -44210003 - Lx3C LINE L1 -901 6075 5889 7 1519 24 53 0 0 chrX 122440375 122440413 -44209883 + AT_rich Low_complexity Low_complexity 1 38 0 7 1519 1144 263 18 21 chrX 122440512 122440792 -44209504 - ORR1B1 LTR MaLR 0 394 116 7 1519 2738 268 57 19 chrX 122440795 122441784 -44208512 + RMER1B Other Other 106 1064 -2 7 1519 354 91 0 0 chrX 122442051 122442106 -44208190 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 1519 500 250 85 20 chrX 122442707 122442907 -44207389 - L1MD3 LINE L1 -10 7985 7773 7 1519 919 242 144 48 chrX 122442976 122443036 -44207260 - ORR1D2 LTR MaLR -4 366 305 7 1519 188 34 0 33 chrX 122443036 122443066 -44207230 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 7 1519 919 242 144 48 chrX 122443066 122443318 -44206978 - ORR1D2 LTR MaLR -66 304 24 7 1519 882 54 0 0 chrX 122443446 122443558 -44206738 + (TTCC)n Simple_repeat Simple_repeat 2 113 0 7 1519 518 309 37 0 chrX 122443674 122443810 -44206486 + RSINE1 SINE B4 3 143 -22 7 1519 666 58 0 0 chrX 122443834 122443921 -44206375 + (CA)n Simple_repeat Simple_repeat 1 87 0 7 1519 248 53 26 0 chrX 122443921 122443959 -44206337 + (CCA)n Simple_repeat Simple_repeat 3 41 0 7 1519 224 188 0 20 chrX 122443974 122444011 -44206285 + polypurine Low_complexity Low_complexity 1 36 0 7 1519 282 87 0 0 chrX 122444011 122444057 -44206239 + (CAGAGA)n Simple_repeat Simple_repeat 2 47 0 7 1519 224 188 0 20 chrX 122444057 122444068 -44206228 + polypurine Low_complexity Low_complexity 37 47 0 7 1519 1849 189 3 8 chrX 122444100 122444483 -44205813 - Lx2 LINE L1 -713 6284 5904 7 1519 748 182 0 7 chrX 122444483 122444638 -44205658 + Lx2 LINE L1 6844 6997 0 7 1519 1166 254 57 83 chrX 122444654 122445041 -44205255 + ORR1C2 LTR MaLR 8 384 0 7 1519 197 108 0 26 chrX 122445863 122445901 -44204395 + (CATA)n Simple_repeat Simple_repeat 4 40 0 7 1519 1011 17 0 0 chrX 122446093 122446210 -44204086 + (TTC)n Simple_repeat Simple_repeat 2 118 0 7 1519 653 68 0 0 chrX 122446210 122446298 -44203998 - B1_Mus2 SINE Alu -58 89 2 7 1519 431 325 16 24 chrX 122446531 122446654 -44203642 + B3 SINE B2 2 123 -93 7 1519 813 171 26 7 chrX 122446677 122446830 -44203466 + Lx2B LINE L1 6156 6311 -689 7 1519 1512 250 61 26 chrX 122446822 122447278 -44203018 + Lx2B LINE L1 6524 6995 -5 7 1519 22 0 0 0 chrX 122447900 122447922 -44202374 + AT_rich Low_complexity Low_complexity 1 22 0 7 1519 297 125 0 0 chrX 122448315 122448371 -44201925 + (TTTTTG)n Simple_repeat Simple_repeat 6 61 0 7 1519 329 239 0 32 chrX 122448371 122448466 -44201830 + RNLTR23 LTR ERVK 551 642 0 7 1519 564 322 98 20 chrX 122449382 122449626 -44200670 + Lx7 LINE L1 7036 7298 -398 7 1519 414 57 0 0 chrX 122449665 122449718 -44200578 + (TC)n Simple_repeat Simple_repeat 1 53 0 7 1519 511 78 22 0 chrX 122449718 122449808 -44200488 + (TG)n Simple_repeat Simple_repeat 1 92 0 7 1519 246 128 0 0 chrX 122449875 122449914 -44200382 + (GA)n Simple_repeat Simple_repeat 2 40 0 7 1519 2833 59 56 3 chrX 122450330 122450706 -44199590 - MTA_Mm LTR MaLR 0 396 1 7 1519 23 33 0 0 chrX 122451450 122451480 -44198816 + AT_rich Low_complexity Low_complexity 1 30 0 7 1519 439 244 34 75 chrX 122451559 122451705 -44198591 + Lx9 LINE L1 6962 7101 -543 7 1519 374 315 74 10 chrX 122451755 122451957 -44198339 + Lx9 LINE L1 7225 7439 -205 7 1519 405 0 0 0 chrX 122451974 122452019 -44198277 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1519 30 27 0 0 chrX 122452115 122452152 -44198144 + AT_rich Low_complexity Low_complexity 1 37 0 7 1519 949 316 32 30 chrX 122452331 122452760 -44197536 + MTE2a-int LTR MaLR 37 587 -993 7 1519 1687 313 153 39 chrX 122452773 122453524 -44196772 + MTE2a-int LTR MaLR 743 1579 -1 7 1519 737 313 35 100 chrX 122453525 122453894 -44196402 + MTE2a LTR MaLR 1 345 -34 7 1519 204 122 0 0 chrX 122453989 122454030 -44196266 + (T)n Simple_repeat Simple_repeat 1 41 0 7 1519 503 31 0 15 chrX 122454084 122454150 -44196146 + (TTA)n Simple_repeat Simple_repeat 3 67 0 7 1519 390 372 14 20 chrX 122454156 122454304 -44195992 - RSINE1 SINE B4 -15 150 4 8 1519 281 82 20 0 chrX 122454320 122454369 -44195927 + (TTTTTG)n Simple_repeat Simple_repeat 3 52 0 8 1519 783 261 36 31 chrX 122454380 122454602 -44195694 - MTD LTR MaLR -194 225 3 8 1519 638 308 19 9 chrX 122454689 122454899 -44195397 + ID_B1 SINE B4 4 215 -9 8 1519 315 0 0 0 chrX 122455229 122455264 -44195032 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 1519 210 412 108 0 chrX 122455266 122455368 -44194928 - B3A SINE B2 -17 181 69 8 1519 441 239 11 0 chrX 122455596 122455684 -44194612 - ID_B1 SINE B4 -1 223 135 8 1519 21 0 0 0 chrX 122456548 122456569 -44193727 + AT_rich Low_complexity Low_complexity 1 21 0 8 1519 668 12 12 0 chrX 122456702 122456783 -44193513 + (GA)n Simple_repeat Simple_repeat 1 82 0 8 1519 440 33 0 32 chrX 122456832 122456895 -44193401 + (TTTA)n Simple_repeat Simple_repeat 1 61 0 8 1519 8209 140 22 25 chrX 122456898 122457855 -44192441 - Lx3A LINE L1 -6 6975 6038 8 1519 210 37 0 0 chrX 122457855 122457882 -44192414 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 8 1519 8209 140 35 25 chrX 122457882 122459019 -44191277 - Lx3A LINE L1 -944 6037 4849 8 1519 468 0 0 0 chrX 122459019 122459071 -44191225 + (TA)n Simple_repeat Simple_repeat 2 53 0 8 1519 6679 140 42 25 chrX 122459071 122459258 -44191038 - Lx3A LINE L1 -1038 4848 4682 8 1519 227 283 130 65 chrX 122459259 122459459 -44190837 - RMER12 LTR ERVK -9 1313 1101 8 1519 336 111 0 0 chrX 122459694 122459757 -44190539 + (A)n Simple_repeat Simple_repeat 1 63 0 8 1519 2011 123 8 28 chrX 122459762 122460126 -44190170 - RLTR22_Mus LTR ERVK -983 825 354 8 1519 410 113 0 14 chrX 122460129 122460201 -44190095 - L1_Mm LINE L1 -2152 3731 3661 8 1519 552 146 0 0 chrX 122460206 122460302 -44189994 + L1_Mus2 LINE L1 2128 2223 -3660 8 1519 4207 93 4 0 chrX 122460302 122460862 -44189434 + IAPEY3-int LTR ERVK 1421 1982 -5698 8 1519 3302 85 11 0 chrX 122460839 122461286 -44189010 + IAPEY3-int LTR ERVK 2238 2689 -4991 8 1519 495 34 0 0 chrX 122461279 122461338 -44188958 + IAPEY3-int LTR ERVK 4852 4910 -2770 8 1519 4049 117 21 7 chrX 122461338 122461947 -44188349 + IAPEy-int LTR ERVK 6896 7513 0 8 1519 3000 45 0 0 chrX 122461947 122462304 -44187992 + IAPEY2_LTR LTR ERVK 1 357 0 8 1519 8565 108 2 3 chrX 122462305 122464249 -44186047 + L1_Mus2 LINE L1 4623 6566 0 8 1519 580 51 0 0 chrX 122464252 122464330 -44185966 - RLTR22_Mus LTR ERVK -1437 371 294 8 1519 207 100 0 0 chrX 122464330 122464360 -44185936 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 8 1519 1897 137 3 7 chrX 122464864 122465166 -44185130 - RLTR22_Mus LTR ERVK -1505 303 3 8 1519 11739 143 33 13 chrX 122465168 122465758 -44184538 - L1_Mur1 LINE L1 -1184 4702 4123 8 1519 333 0 0 0 chrX 122465758 122465795 -44184501 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 1519 11739 143 33 13 chrX 122465795 122467353 -44182943 - L1_Mur1 LINE L1 -1764 4122 2510 8 1519 1519 212 27 61 chrX 122467353 122467760 -44182536 - RLTR9C LTR ERVK 0 393 1 8 1519 481 92 0 26 chrX 122467764 122467842 -44182454 - ETnERV2-int LTR ERVK -4 7402 7327 8 1519 1030 199 12 58 chrX 122468052 122468638 -44181658 - ETnERV2-int LTR ERVK -1703 3141 2901 8 1519 747 110 9 14 chrX 122468647 122468776 -44181520 + IAPLTR2b LTR ERVK 1 151 -206 8 1519 4424 111 71 58 chrX 122468776 122469620 -44180676 + IAPEz-int LTR ERVK 211 995 -5486 8 1519 398 70 0 0 chrX 122469620 122469677 -44180619 + B1_Mus1 SINE Alu 1 57 -91 8 1519 1898 67 4 0 chrX 122469682 122469921 -44180375 + IAPEY3-int LTR ERVK 2258 2497 -5183 8 1519 13418 79 15 9 chrX 122469920 122471734 -44178562 + IAPEz-int LTR ERVK 4656 6481 0 8 1519 2501 57 35 0 chrX 122471734 122472048 -44178248 + IAPLTR2b LTR ERVK 1 325 -2 8 1519 3904 187 40 32 chrX 122472048 122473500 -44176796 - ETnERV2-int LTR ERVK -3321 4085 2357 8 1519 901 152 0 18 chrX 122474060 122474228 -44176068 - RLTR13D1 LTR ERVK -156 650 486 8 1519 2339 198 22 20 chrX 122474228 122474729 -44175567 - ETnERV2-int LTR ERVK -4409 2997 2496 8 1519 4199 193 27 108 chrX 122474756 122476018 -44174278 - MMETn-int LTR ERVK -3675 1169 10 8 1519 688 228 55 61 chrX 122476027 122476274 -44174022 - RLTR9E LTR ERVK -7 430 143 8 1519 3542 135 20 0 chrX 122476609 122477208 -44173088 - L1_Mur1 LINE L1 -3847 2039 1429 8 1519 226 67 22 22 chrX 122479006 122479052 -44171244 + (CAAAAA)n Simple_repeat Simple_repeat 4 49 0 8 1519 269 98 60 24 chrX 122479157 122479241 -44171055 + T-rich Low_complexity Low_complexity 3 89 0 8 1519 406 325 78 68 chrX 122479242 122479651 -44170645 - L1MD LINE L1 -2666 3480 3068 8 1519 22 70 0 0 chrX 122480184 122480227 -44170069 + AT_rich Low_complexity Low_complexity 1 43 0 8 1519 371 37 0 138 chrX 122480600 122480694 -44169602 + T-rich Low_complexity Low_complexity 1 81 0 8 1519 507 45 0 0 chrX 122480807 122480873 -44169423 + (TG)n Simple_repeat Simple_repeat 2 67 0 8 1519 192 40 0 0 chrX 122481143 122481168 -44169128 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 8 1519 191 61 0 29 chrX 122481229 122481263 -44169033 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 8 1519 222 37 0 0 chrX 122481378 122481405 -44168891 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 8 1519 363 98 0 0 chrX 122481618 122481679 -44168617 + (T)n Simple_repeat Simple_repeat 1 61 0 8 1519 194 0 39 0 chrX 122481903 122481929 -44168367 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 8 1519 1027 102 0 0 chrX 122481929 122482076 -44168220 - B1_Mus1 SINE Alu 0 148 2 8 1519 211 159 0 104 chrX 122482157 122482234 -44168062 + A-rich Low_complexity Low_complexity 3 71 0 8 1519 225 146 0 0 chrX 122482391 122482439 -44167857 + (T)n Simple_repeat Simple_repeat 1 48 0 8 1519 1138 48 7 0 chrX 122482441 122482586 -44167710 - B1_Mus2 SINE Alu 0 147 2 8 1519 27 49 0 0 chrX 122482803 122482844 -44167452 + AT_rich Low_complexity Low_complexity 1 41 0 8 1519 204 40 0 0 chrX 122483708 122483733 -44166563 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 8 1519 1046 77 14 0 chrX 122483733 122483876 -44166420 - B1_Mus1 SINE Alu -2 146 2 8 1519 22 0 0 0 chrX 122483911 122483933 -44166363 + AT_rich Low_complexity Low_complexity 1 22 0 8 1519 207 0 0 0 chrX 122483981 122484004 -44166292 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 8 1519 380 20 0 20 chrX 122484045 122484095 -44166201 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 8 1519 935 63 0 0 chrX 122484095 122484221 -44166075 - B1_Mus2 SINE Alu -10 137 12 8 1519 200 254 26 26 chrX 122484257 122484370 -44165926 + A-rich Low_complexity Low_complexity 2 114 0 8 1519 249 33 0 0 chrX 122484450 122484480 -44165816 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 8 1519 198 67 43 22 chrX 122484581 122484627 -44165669 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 8 1519 195 114 0 0 chrX 122484860 122484895 -44165401 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 8 1519 219 69 0 0 chrX 122484930 122484959 -44165337 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8 1519 225 0 0 0 chrX 122485274 122485299 -44164997 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 8 1519 250 257 0 87 chrX 122485389 122485585 -44164711 + T-rich Low_complexity Low_complexity 2 180 0 8 1519 303 270 54 90 chrX 122486098 122486265 -44164031 - L1MDa LINE L1 -4132 2501 2341 8 1519 21 36 0 0 chrX 122486447 122486475 -44163821 + AT_rich Low_complexity Low_complexity 1 28 0 8 1519 279 0 0 0 chrX 122486707 122486738 -44163558 + (T)n Simple_repeat Simple_repeat 1 31 0 8 1519 234 184 0 0 chrX 122486778 122486827 -44163469 + T-rich Low_complexity Low_complexity 1 49 0 8 1519 23 68 0 0 chrX 122487011 122487055 -44163241 + AT_rich Low_complexity Low_complexity 1 44 0 8 1519 23 0 0 0 chrX 122487194 122487217 -44163079 + AT_rich Low_complexity Low_complexity 1 23 0 8 1519 21 0 0 0 chrX 122487239 122487260 -44163036 + AT_rich Low_complexity Low_complexity 1 21 0 8 1519 23 97 0 0 chrX 122487399 122487471 -44162825 + AT_rich Low_complexity Low_complexity 1 72 0 8 1519 243 61 0 0 chrX 122487561 122487594 -44162702 + (T)n Simple_repeat Simple_repeat 1 33 0 8 1519 360 0 0 0 chrX 122487738 122487778 -44162518 + (TAA)n Simple_repeat Simple_repeat 1 40 0 8 1519 276 244 23 41 chrX 122488389 122488560 -44161736 + (TATAA)n Simple_repeat Simple_repeat 3 170 0 8 1519 764 153 20 46 chrX 122488707 122488858 -44161438 - B1_Mus1 SINE Alu 0 148 2 8 1519 1280 73 6 0 chrX 122489041 122489218 -44161078 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 8 1519 664 201 12 6 chrX 122489219 122489389 -44160907 + CT-rich Low_complexity Low_complexity 3 173 0 8 1519 760 104 0 16 chrX 122489347 122489474 -44160822 + (TTC)n Simple_repeat Simple_repeat 2 126 0 8 1519 883 122 14 7 chrX 122489495 122489635 -44160661 - B1_Mus1 SINE Alu -6 142 2 8 1519 235 225 0 14 chrX 122489641 122489713 -44160583 + A-rich Low_complexity Low_complexity 3 73 0 8 1519 425 243 162 26 chrX 122489958 122490186 -44160110 - L1MC4 LINE L1 -5017 1198 940 8 1519 883 122 14 7 chrX 122490187 122490327 -44159969 - B1_Mus1 SINE Alu -6 142 2 8 1519 226 281 6 57 chrX 122490333 122490510 -44159786 + A-rich Low_complexity Low_complexity 3 170 0 8 1519 789 185 6 11 chrX 122490644 122490824 -44159472 + CT-rich Low_complexity Low_complexity 2 180 0 8 1519 784 185 7 0 chrX 122490824 122490970 -44159326 - B1_Mus1 SINE Alu 0 148 2 8 1519 24 0 0 0 chrX 122491004 122491028 -44159268 + AT_rich Low_complexity Low_complexity 1 24 0 8 1519 255 130 0 0 chrX 122491080 122491134 -44159162 + (A)n Simple_repeat Simple_repeat 1 54 0 8 1519 198 91 0 0 chrX 122491186 122491219 -44159077 + (A)n Simple_repeat Simple_repeat 1 33 0 8 1519 315 75 14 43 chrX 122491367 122491437 -44158859 + (TTTTG)n Simple_repeat Simple_repeat 2 69 0 8 1519 835 170 0 0 chrX 122491443 122491584 -44158712 - B1_Mus1 SINE Alu -6 142 2 8 1519 384 235 12 40 chrX 122491599 122491772 -44158524 + A-rich Low_complexity Low_complexity 1 168 0 8 1519 254 50 25 0 chrX 122491788 122491828 -44158468 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 8 1519 23 0 0 0 chrX 122491873 122491896 -44158400 + AT_rich Low_complexity Low_complexity 1 23 0 8 1519 658 59 39 0 chrX 122491928 122492030 -44158266 + (TTTC)n Simple_repeat Simple_repeat 2 107 0 8 1519 790 175 7 0 chrX 122492044 122492181 -44158115 - B1_Mus1 SINE Alu -8 140 3 8 1519 740 141 0 7 chrX 122492509 122492645 -44157651 + (TTTC)n Simple_repeat Simple_repeat 2 136 0 8 1519 854 129 14 0 chrX 122492650 122492789 -44157507 - B1_Mus1 SINE Alu -6 142 2 8 1519 28 0 0 0 chrX 122492882 122492910 -44157386 + AT_rich Low_complexity Low_complexity 1 28 0 8 1519 198 0 0 0 chrX 122493002 122493024 -44157272 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 8 1519 225 0 0 0 chrX 122493080 122493105 -44157191 + (A)n Simple_repeat Simple_repeat 1 25 0 8 1519 910 132 0 12 chrX 122493168 122493329 -44156967 + (TTTC)n Simple_repeat Simple_repeat 3 161 0 8 1519 783 168 14 0 chrX 122493329 122493472 -44156824 - B1_Mus1 SINE Alu 0 148 4 8 1519 206 232 0 0 chrX 122493510 122493566 -44156730 + A-rich Low_complexity Low_complexity 1 56 0 8 1519 237 329 0 0 chrX 122495786 122495865 -44154431 - MurSAT1 Satellite Satellite -35 85 7 8 1519 298 288 6 6 chrX 122495909 122496016 -44154280 - MurSAT1 Satellite Satellite -38 107 1 8 1519 269 330 5 5 chrX 122496488 122496631 -44153665 - MurSAT1 Satellite Satellite -2 143 1 9 1519 238 295 12 25 chrX 122496850 122496930 -44153366 - MurSAT1 Satellite Satellite -6 114 36 9 1519 295 297 26 26 chrX 122497032 122497146 -44153150 - MurSAT1 Satellite Satellite 0 120 1 9 1519 226 354 10 10 chrX 122497182 122497282 -44153014 - MurSAT1 Satellite Satellite -6 114 15 9 1519 287 356 9 9 chrX 122497503 122497709 -44152587 - MurSAT1 Satellite Satellite -3 206 1 9 1519 385 285 23 23 chrX 122497921 122498208 -44152088 - MurSAT1 Satellite Satellite -1 287 1 9 1519 281 365 0 0 chrX 122498612 122498751 -44151545 - MurSAT1 Satellite Satellite -11 139 1 9 1519 285 319 9 9 chrX 122499346 122499460 -44150836 - MurSAT1 Satellite Satellite -1 119 6 9 1519 322 315 11 11 chrX 122499496 122499626 -44150670 - MurSAT1 Satellite Satellite -1 130 1 9 1519 261 163 0 0 chrX 122499949 122499992 -44150304 - MurSAT1 Satellite Satellite -28 92 50 9 1519 261 163 0 0 chrX 122500330 122500373 -44149923 - MurSAT1 Satellite Satellite -28 92 50 1 1519 286 265 80 29 chrX 122501032 122501175 -44149121 - MurSAT1 Satellite Satellite -19 150 1 2 1519 243 308 13 13 chrX 122501194 122501273 -44149023 - MurSAT1 Satellite Satellite -40 80 2 2 1519 238 361 0 0 chrX 122502146 122502243 -44148053 - MurSAT1 Satellite Satellite -23 97 1 3 1519 283 326 16 5 chrX 122502654 122502825 -44147471 - MurSAT1 Satellite Satellite -27 172 1 4 1519 235 328 16 87 chrX 122503015 122503142 -44147154 - MurSAT1 Satellite Satellite -1 119 2 5 1519 294 312 14 14 chrX 122503295 122503443 -44146853 - MurSAT1 Satellite Satellite -23 148 1 6 1519 314 282 39 6 chrX 122503791 122503919 -44146377 - MurSAT1 Satellite Satellite -14 132 1 7 1519 246 275 25 12 chrX 122504444 122504546 -44145750 - MurSAT1 Satellite Satellite -23 103 1 8 1519 329 313 15 5 chrX 122504952 122505128 -44145168 - MurSAT1 Satellite Satellite -27 177 1 9 1519 252 325 16 86 chrX 122505313 122505441 -44144855 - MurSAT1 Satellite Satellite -1 119 1 1 1519 283 302 10 10 chrX 122505593 122505690 -44144606 - MurSAT1 Satellite Satellite -23 97 1 1 1519 294 273 36 6 chrX 122506101 122506217 -44144079 - MurSAT1 Satellite Satellite -27 119 1 1 1519 243 325 16 86 chrX 122506462 122506590 -44143706 - MurSAT1 Satellite Satellite -1 119 1 1 1519 274 312 10 10 chrX 122506742 122506839 -44143457 - MurSAT1 Satellite Satellite -23 97 1 1 1519 314 313 15 5 chrX 122507250 122507426 -44142870 - MurSAT1 Satellite Satellite -27 177 1 1 1519 227 328 16 87 chrX 122507611 122507738 -44142558 - MurSAT1 Satellite Satellite -1 119 2 1 1519 246 295 24 24 chrX 122507891 122508039 -44142257 - MurSAT1 Satellite Satellite -23 148 1 1 1519 329 308 15 5 chrX 122508399 122508575 -44141721 - MurSAT1 Satellite Satellite -27 177 1 1 1519 283 273 34 34 chrX 122509040 122509188 -44141108 - MurSAT1 Satellite Satellite -23 148 1 1 1519 329 316 16 5 chrX 122509553 122509724 -44140572 - MurSAT1 Satellite Satellite -32 172 1 2 1519 233 325 16 86 chrX 122509909 122510037 -44140259 - MurSAT1 Satellite Satellite -1 119 1 2 1519 252 263 26 13 chrX 122510189 122510291 -44140005 - MurSAT1 Satellite Satellite -23 103 1 2 1519 308 313 15 5 chrX 122510697 122510873 -44139423 - MurSAT1 Satellite Satellite -27 177 1 2 1519 227 328 16 87 chrX 122511058 122511185 -44139111 - MurSAT1 Satellite Satellite -1 119 2 2 1519 227 271 36 36 chrX 122511375 122511486 -44138810 - MurSAT1 Satellite Satellite 0 120 10 2 1519 308 323 15 5 chrX 122511846 122512022 -44138274 - MurSAT1 Satellite Satellite -27 177 1 2 1519 299 323 26 13 chrX 122513015 122513190 -44137106 - MurSAT1 Satellite Satellite -2 177 1 2 1519 370 250 10 10 chrX 122513645 122513742 -44136554 - MurSAT1 Satellite Satellite -23 97 1 2 1519 332 300 14 9 chrX 122514073 122514201 -44136095 - MurSAT1 Satellite Satellite -21 128 1 2 1519 351 320 13 13 chrX 122514418 122514622 -44135674 - MurSAT1 Satellite Satellite -1 204 1 3 1519 256 335 37 27 chrX 122514662 122514924 -44135372 - MurSAT1 Satellite Satellite -5 264 1 3 1519 287 326 9 9 chrX 122515184 122515316 -44134980 - MurSAT1 Satellite Satellite -11 132 1 3 1519 265 24 23 23 chrX 122521423 122521466 -44128830 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 3 1519 3144 118 7 0 chrX 122521637 122522070 -44128226 + L1_Mus3 LINE L1 6197 6632 -6 3 1519 1317 34 6 22 chrX 122522821 122523002 -44127294 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 3 1519 668 119 0 9 chrX 122523003 122523113 -44127183 + (TTCC)n Simple_repeat Simple_repeat 1 109 0 3 1519 669 162 210 19 chrX 122523113 122523270 -44127026 - B2_Mm2 SINE B2 -8 187 1 3 1519 233 277 20 10 chrX 122527838 122527864 -44122432 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 3 1519 481 105 10 10 chrX 122527864 122527960 -44122336 + (TATG)n Simple_repeat Simple_repeat 1 96 0 3 1519 252 239 0 14 chrX 122527960 122528035 -44122261 + CT-rich Low_complexity Low_complexity 1 73 0 3 1519 531 246 59 18 chrX 122528070 122528240 -44122056 + ORR1B2 LTR MaLR 1 177 -190 4 1519 336 24 0 0 chrX 122528378 122528419 -44121877 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1519 1947 186 61 51 chrX 122528424 122529013 -44121283 - RLTR21 LTR ERVK -155 1249 550 4 1519 1317 221 20 78 chrX 122529051 122529395 -44120901 - RLTR21 LTR ERVK -1248 324 1 4 1519 267 295 0 18 chrX 122529763 122529877 -44120419 - Lx6 LINE L1 -17 7443 7332 4 1519 366 320 41 50 chrX 122529889 122530109 -44120187 - Lx6 LINE L1 -1338 6122 5905 4 1519 2074 197 24 31 chrX 122530115 122530298 -44119998 - MTC LTR MaLR 0 421 238 4 1519 6771 106 6 1 chrX 122530298 122531187 -44119109 + RLTR13B1 LTR ERVK 1 893 0 4 1519 2074 197 24 31 chrX 122531187 122531427 -44118869 - MTC LTR MaLR -184 237 1 4 1519 946 241 39 49 chrX 122531430 122531714 -44118582 - Lx7 LINE L1 -1796 5900 5620 4 1519 987 209 41 31 chrX 122531734 122532026 -44118270 - L1_Mur3 LINE L1 -2593 3287 2993 4 1519 6292 108 3 2 chrX 122532031 122532923 -44117373 - L1_Mus2 LINE L1 0 6566 5674 4 1519 3714 34 2 0 chrX 122532924 122533398 -44116898 - L1Md_F3 LINE L1 -562 6022 5548 4 1519 4624 60 0 2 chrX 122533398 122533948 -44116348 + L1Md_F3 LINE L1 6034 6582 -2 4 1519 830 186 7 0 chrX 122533951 122534091 -44116205 - L1_Mm LINE L1 -198 5685 5545 5 1519 5141 96 15 12 chrX 122534120 122535516 -44114780 + L1Md_F LINE L1 505 1904 -3979 5 1519 500 315 20 10 chrX 122535920 122536119 -44114177 - Lx8 LINE L1 -941 6532 6332 5 1519 227 315 53 37 chrX 122536268 122536456 -44113840 - Lx9 LINE L1 -1654 5990 5800 5 1519 417 296 52 22 chrX 122536463 122536740 -44113556 - L1M2 LINE L1 -431 5740 5449 5 1519 2847 254 44 15 chrX 122536749 122537501 -44112795 + ORR1D-int LTR MaLR 455 1228 -142 5 1519 422 158 73 0 chrX 122537623 122537705 -44112591 + MERVL_2A-int LTR ERVL 5674 5761 0 5 1519 544 244 7 44 chrX 122537705 122537842 -44112454 + MT2A LTR ERVL 1 132 -401 5 1519 1883 196 12 0 chrX 122537957 122538299 -44111997 - Lx7 LINE L1 -694 7002 6657 5 1519 659 275 26 78 chrX 122538294 122538307 -44111989 + Lx7 LINE L1 7305 7317 -379 5 1519 2356 112 16 3 chrX 122538307 122538630 -44111666 + ORR1A2 LTR MaLR 1 327 0 5 1519 659 275 26 78 chrX 122538630 122538999 -44111297 + Lx7 LINE L1 7318 7667 -29 5 1519 7551 239 37 117 chrX 122538997 122543489 -44106807 - Lx5 LINE L1 -19 7031 2881 6 1519 356 312 48 105 chrX 122543489 122543718 -44106578 - RLTR22_Mur LTR ERVK -73 1249 1034 6 1519 39314 8 0 1 chrX 122543718 122549482 -44100814 + L1Md_A LINE L1 1 5586 -297 6 1519 9549 5 0 1 chrX 122549482 122550479 -44099817 + L1Md_A LINE L1 5587 6582 0 6 1519 944 278 116 80 chrX 122550591 122551396 -44098900 - RLTR22_Mur LTR ERVK -1046 802 1 6 1519 796 302 14 19 chrX 122551396 122551757 -44098539 - Lx5 LINE L1 -6466 1262 904 6 1519 198 0 0 0 chrX 122551757 122551779 -44098517 + (T)n Simple_repeat Simple_repeat 1 22 0 6 189 299 335 80 12 chrX 122552269 122552432 -44097864 - MTE2a LTR MaLR -10 369 196 6 1520 7110 57 4 12 chrX 122552465 122553377 -44096919 - L1Md_F3 LINE L1 0 6584 5680 6 1520 358 284 75 61 chrX 122553377 122553515 -44096781 - MTE2a LTR MaLR -181 198 65 6 1520 183 42 0 0 chrX 122553522 122553546 -44096750 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1520 980 125 14 0 chrX 122553546 122553682 -44096614 - B1_Mm SINE Alu -7 140 3 6 1520 294 319 67 80 chrX 122553682 122553769 -44096527 - MTE2a LTR MaLR -322 97 3 6 1520 1222 277 84 20 chrX 122553837 122554180 -44096116 + ORR1D1 LTR MaLR 9 373 -1 6 1520 1946 239 77 30 chrX 122554648 122555157 -44095139 - RLTR20B3 LTR ERVK -44 533 1 6 1520 21 36 0 0 chrX 122555190 122555218 -44095078 + AT_rich Low_complexity Low_complexity 1 28 0 7 1520 234 372 45 20 chrX 122555314 122555514 -44094782 + HAL1 LINE L1 162 366 -2141 7 1520 200 211 0 0 chrX 122555948 122555986 -44094310 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 7 1520 198 0 0 0 chrX 122556130 122556152 -44094144 + (T)n Simple_repeat Simple_repeat 1 22 0 7 1520 1583 99 7 10 chrX 122556433 122556668 -44093628 + RLTR13A LTR ERVK 1 231 -752 7 1520 32302 38 0 1 chrX 122556668 122561305 -44088991 - L1Md_T LINE L1 -43 6539 1908 7 1520 1734 94 18 36 chrX 122561305 122561581 -44088715 + RLTR13A LTR ERVK 84 354 -501 7 1520 21 71 0 0 chrX 122561605 122561647 -44088649 + AT_rich Low_complexity Low_complexity 1 42 0 7 1520 270 178 0 0 chrX 122561778 122561823 -44088473 + L1_Mur3 LINE L1 3480 3524 -2356 7 1520 297 345 11 0 chrX 122561881 122561968 -44088328 - RSINE1 SINE B4 -10 155 68 7 1520 337 293 54 54 chrX 122561972 122562156 -44088140 + L1M2 LINE L1 3738 3921 -2222 8 1520 2494 162 14 49 chrX 122562163 122562670 -44087626 - Lx2B LINE L1 -708 6292 5804 8 1520 394 0 60 15 chrX 122562732 122562799 -44087497 + (TTTTTG)n Simple_repeat Simple_repeat 3 72 0 8 1520 680 129 0 0 chrX 122562800 122562901 -44087395 - B1_Mus2 SINE Alu 0 147 47 8 1520 301 222 0 40 chrX 122562849 122562924 -44087372 - RLTR25B LTR ERVK -530 498 427 8 1520 2924 198 39 14 chrX 122562925 122563559 -44086737 - Lx2B LINE L1 -133 5753 5104 8 1520 2433 197 52 16 chrX 122563550 122564050 -44086246 + Lx2B LINE L1 6477 6994 -6 8 1520 365 337 115 73 chrX 122564151 122564193 -44086103 - MT2A LTR ERVL -1 600 546 8 1520 399 21 0 0 chrX 122564193 122564241 -44086055 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 1520 902 280 105 31 chrX 122564241 122564627 -44085669 - MT2A LTR ERVL -56 545 1 8 1520 255 346 0 0 chrX 122564946 122565027 -44085269 + ORR1D2 LTR MaLR 6 86 -284 8 1520 2212 56 0 7 chrX 122565109 122565396 -44084900 + L1Md_F2 LINE L1 6298 6582 0 8 1520 5095 111 8 5 chrX 122565406 122566157 -44084139 + L1_Mm LINE L1 4951 5703 -180 9 1520 2627 139 24 24 chrX 122566153 122566476 -44083820 - Lx3_Mus LINE L1 -769 6240 5913 9 1520 216 0 0 0 chrX 122566476 122566500 -44083796 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 9 1520 2627 139 24 24 chrX 122566500 122566634 -44083662 - Lx3_Mus LINE L1 -1097 5912 5783 9 1520 525 293 58 54 chrX 122567382 122567771 -44082525 - MuLV-int LTR ERV1 -147 7459 7115 9 1520 636 138 29 25 chrX 122569268 122569413 -44080883 - RMER17D2 LTR ERVK -10 896 703 9 1520 1047 118 0 79 chrX 122569417 122569620 -44080676 - Lx3C LINE L1 -901 6075 5889 9 1520 24 53 0 0 chrX 122569702 122569740 -44080556 + AT_rich Low_complexity Low_complexity 1 38 0 9 1520 1143 263 18 21 chrX 122569839 122570119 -44080177 - ORR1B1 LTR MaLR 0 394 116 9 1520 2746 270 64 17 chrX 122570122 122571109 -44079187 + RMER1B Other Other 106 1062 -4 9 1520 318 98 0 0 chrX 122571378 122571429 -44078867 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 1520 465 250 85 20 chrX 122572030 122572230 -44078066 - L1MD3 LINE L1 -10 7985 7773 1 1520 915 243 146 52 chrX 122572295 122572359 -44077937 - ORR1D2 LTR MaLR 0 394 305 1 1520 188 34 0 33 chrX 122572359 122572389 -44077907 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 1 1520 915 244 147 55 chrX 122572389 122572673 -44077623 - ORR1D2 LTR MaLR -79 315 24 1 1520 882 54 0 0 chrX 122572769 122572881 -44077415 + (TTCC)n Simple_repeat Simple_repeat 2 113 0 1 1520 518 309 37 0 chrX 122572997 122573133 -44077163 + RSINE1 SINE B4 3 143 -22 1 1520 648 59 0 0 chrX 122573157 122573242 -44077054 + (CA)n Simple_repeat Simple_repeat 1 85 0 1 1520 248 53 26 0 chrX 122573242 122573280 -44077016 + (CCA)n Simple_repeat Simple_repeat 3 41 0 1 1520 224 188 0 20 chrX 122573295 122573332 -44076964 + polypurine Low_complexity Low_complexity 1 36 0 1 1520 282 87 0 0 chrX 122573332 122573378 -44076918 + (CAGAGA)n Simple_repeat Simple_repeat 2 47 0 1 1520 224 188 0 20 chrX 122573378 122573389 -44076907 + polypurine Low_complexity Low_complexity 37 47 0 1 1520 1849 189 3 8 chrX 122573421 122573804 -44076492 - Lx2 LINE L1 -713 6284 5904 1 1520 748 182 0 7 chrX 122573804 122573959 -44076337 + Lx2 LINE L1 6844 6997 0 1 1520 1166 254 57 83 chrX 122573975 122574362 -44075934 + ORR1C2 LTR MaLR 8 384 0 1 1520 197 108 0 26 chrX 122575184 122575222 -44075074 + (CATA)n Simple_repeat Simple_repeat 4 40 0 1 1520 930 19 0 0 chrX 122575414 122575522 -44074774 + (TTC)n Simple_repeat Simple_repeat 2 109 0 1 1520 653 68 0 0 chrX 122575522 122575610 -44074686 - B1_Mus2 SINE Alu -58 89 2 1 1520 431 325 16 24 chrX 122575843 122575966 -44074330 + B3 SINE B2 2 123 -93 1 1520 813 171 26 7 chrX 122575989 122576142 -44074154 + Lx2B LINE L1 6156 6311 -689 1 1520 1512 250 61 26 chrX 122576134 122576590 -44073706 + Lx2B LINE L1 6524 6995 -5 1 1520 22 0 0 0 chrX 122577212 122577234 -44073062 + AT_rich Low_complexity Low_complexity 1 22 0 1 1520 297 125 0 0 chrX 122577627 122577683 -44072613 + (TTTTTG)n Simple_repeat Simple_repeat 6 61 0 1 1520 329 239 0 32 chrX 122577683 122577778 -44072518 + RNLTR23 LTR ERVK 551 642 0 1 1520 564 322 98 20 chrX 122578694 122578938 -44071358 + Lx7 LINE L1 7036 7298 -398 1 1520 414 57 0 0 chrX 122578977 122579030 -44071266 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 1520 529 76 22 0 chrX 122579030 122579122 -44071174 + (TG)n Simple_repeat Simple_repeat 1 94 0 1 1520 246 128 0 0 chrX 122579192 122579231 -44071065 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 1520 2807 61 56 3 chrX 122579647 122580023 -44070273 - MTA_Mm LTR MaLR 0 396 1 1 1520 23 33 0 0 chrX 122580766 122580796 -44069500 + AT_rich Low_complexity Low_complexity 1 30 0 1 1520 439 244 34 75 chrX 122580875 122581021 -44069275 + Lx9 LINE L1 6962 7101 -543 1 1520 374 315 74 10 chrX 122581071 122581273 -44069023 + Lx9 LINE L1 7225 7439 -205 1 1520 396 0 0 0 chrX 122581290 122581334 -44068962 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1520 30 27 0 0 chrX 122581431 122581468 -44068828 + AT_rich Low_complexity Low_complexity 1 37 0 1 1520 973 314 32 30 chrX 122581647 122582076 -44068220 + MTE2a-int LTR MaLR 37 587 -993 1 1520 1687 313 153 39 chrX 122582089 122582840 -44067456 + MTE2a-int LTR MaLR 743 1579 -1 1 1520 737 313 35 100 chrX 122582841 122583210 -44067086 + MTE2a LTR MaLR 1 345 -34 1 1520 195 125 0 0 chrX 122583305 122583345 -44066951 + (T)n Simple_repeat Simple_repeat 1 40 0 1 1520 422 36 0 18 chrX 122583399 122583456 -44066840 + (TTA)n Simple_repeat Simple_repeat 3 58 0 1 1520 390 372 14 20 chrX 122583462 122583610 -44066686 - RSINE1 SINE B4 -15 150 4 1 1520 281 82 20 0 chrX 122583626 122583675 -44066621 + (TTTTTG)n Simple_repeat Simple_repeat 3 52 0 1 1520 778 261 36 36 chrX 122583686 122583909 -44066387 - MTD LTR MaLR -194 225 3 1 1520 638 308 19 9 chrX 122583996 122584206 -44066090 + ID_B1 SINE B4 4 215 -9 1 1520 441 0 0 0 chrX 122584536 122584585 -44065711 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1520 210 412 108 0 chrX 122584587 122584689 -44065607 - B3A SINE B2 -17 181 69 1 1520 429 250 11 0 chrX 122584917 122585005 -44065291 - ID_B1 SINE B4 -1 223 135 1 1520 21 0 0 0 chrX 122585869 122585890 -44064406 + AT_rich Low_complexity Low_complexity 1 21 0 1 1520 452 18 18 0 chrX 122586023 122586080 -44064216 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 1520 548 27 0 27 chrX 122586129 122586204 -44064092 + (TTTA)n Simple_repeat Simple_repeat 1 73 0 1 1520 8229 139 22 25 chrX 122586207 122587164 -44063132 - Lx3A LINE L1 -6 6975 6038 1 1520 210 37 0 0 chrX 122587164 122587191 -44063105 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 1 1520 8229 140 34 20 chrX 122587191 122588328 -44061968 - Lx3A LINE L1 -944 6037 4857 1 1520 432 0 0 0 chrX 122588328 122588376 -44061920 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1520 6742 141 42 16 chrX 122588376 122588553 -44061743 - Lx3A LINE L1 -1030 4856 4681 1 1520 227 283 130 65 chrX 122588554 122588754 -44061542 - RMER12 LTR ERVK -9 1313 1101 1 1520 384 40 0 0 chrX 122588989 122589039 -44061257 + (A)n Simple_repeat Simple_repeat 1 50 0 1 1520 2011 123 8 28 chrX 122589044 122589408 -44060888 - RLTR22_Mus LTR ERVK -983 825 354 1 1520 430 99 0 14 chrX 122589411 122589483 -44060813 - L1_Mm LINE L1 -2152 3731 3661 1 1520 533 156 0 0 chrX 122589488 122589584 -44060712 + L1_Mus2 LINE L1 2128 2223 -3660 1 1520 4207 93 4 0 chrX 122589584 122590144 -44060152 + IAPEY3-int LTR ERVK 1421 1982 -5698 1 1520 3302 85 11 0 chrX 122590121 122590568 -44059728 + IAPEY3-int LTR ERVK 2238 2689 -4991 1 1520 495 34 0 0 chrX 122590561 122590620 -44059676 + IAPEY3-int LTR ERVK 4852 4910 -2770 1 1520 4060 116 21 7 chrX 122590620 122591229 -44059067 + IAPEy-int LTR ERVK 6896 7513 0 1 1520 2945 50 0 0 chrX 122591229 122591586 -44058710 + IAPEY2_LTR LTR ERVK 1 357 0 1 1520 8490 111 2 3 chrX 122591587 122593531 -44056765 + L1_Mus2 LINE L1 4623 6566 0 1 1520 580 51 0 0 chrX 122593534 122593612 -44056684 - RLTR22_Mus LTR ERVK -1437 371 294 1 1520 237 65 0 0 chrX 122593612 122593643 -44056653 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 1 1520 1897 137 3 7 chrX 122594147 122594449 -44055847 - RLTR22_Mus LTR ERVK -1505 303 3 1 1520 11722 143 33 13 chrX 122594451 122595041 -44055255 - L1_Mur1 LINE L1 -1184 4702 4123 1 1520 351 0 0 0 chrX 122595041 122595080 -44055216 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1520 11722 143 33 13 chrX 122595080 122596638 -44053658 - L1_Mur1 LINE L1 -1764 4122 2510 1 1520 1535 197 54 88 chrX 122596638 122597045 -44053251 - RLTR9C LTR ERVK 0 393 1 1 1520 457 105 0 26 chrX 122597048 122597126 -44053170 - ETnERV2-int LTR ERVK -4 7402 7327 1 1520 1030 199 12 58 chrX 122597336 122597922 -44052374 - ETnERV2-int LTR ERVK -1703 3141 2901 1 1520 747 110 9 14 chrX 122597931 122598060 -44052236 + IAPLTR2b LTR ERVK 1 151 -206 1 1520 4406 112 71 58 chrX 122598060 122598904 -44051392 + IAPEz-int LTR ERVK 211 995 -5486 1 1520 398 70 0 0 chrX 122598904 122598961 -44051335 + B1_Mus1 SINE Alu 1 57 -91 1 1520 1898 67 4 0 chrX 122598966 122599205 -44051091 + IAPEY3-int LTR ERVK 2258 2497 -5183 1 1520 13451 80 14 9 chrX 122599204 122601021 -44049275 + IAPEz-int LTR ERVK 4656 6481 0 1 1520 2501 57 35 0 chrX 122601021 122601335 -44048961 + IAPLTR2b LTR ERVK 1 325 -2 1 1520 3904 189 39 30 chrX 122601335 122602787 -44047509 - ETnERV2-int LTR ERVK -3321 4085 2363 1 1520 919 146 0 18 chrX 122603347 122603515 -44046781 - RLTR13D1 LTR ERVK -156 650 486 1 1520 2339 198 22 20 chrX 122603515 122604016 -44046280 - ETnERV2-int LTR ERVK -4409 2997 2496 1 1520 4174 193 28 108 chrX 122604043 122605304 -44044992 - MMETn-int LTR ERVK -3675 1169 10 1 1520 688 228 55 61 chrX 122605313 122605560 -44044736 - RLTR9E LTR ERVK -7 430 143 1 1520 3510 137 20 0 chrX 122605895 122606494 -44043802 - L1_Mur1 LINE L1 -3847 2039 1429 1 1520 208 139 0 0 chrX 122607298 122607334 -44042962 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1520 235 65 21 21 chrX 122608294 122608341 -44041955 + (CAAAAA)n Simple_repeat Simple_repeat 3 49 0 1 1520 282 51 49 33 chrX 122608446 122608507 -44041789 + (TTTTTG)n Simple_repeat Simple_repeat 4 65 0 1 1520 392 302 91 71 chrX 122608526 122609021 -44041275 - L1MDa LINE L1 -2666 3871 3461 1 1520 23 68 0 0 chrX 122609471 122609515 -44040781 + AT_rich Low_complexity Low_complexity 1 44 0 1 1520 258 56 0 0 chrX 122609940 122609976 -44040320 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1520 21 57 0 0 chrX 122610026 122610061 -44040235 + AT_rich Low_complexity Low_complexity 1 35 0 1 1520 525 44 0 0 chrX 122610092 122610160 -44040136 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 1520 208 95 48 0 chrX 122610412 122610454 -44039842 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1 1520 191 61 0 29 chrX 122610515 122610549 -44039747 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1520 222 37 0 0 chrX 122610665 122610692 -44039604 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 1520 194 0 39 0 chrX 122611169 122611195 -44039101 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1 1520 1015 109 0 0 chrX 122611195 122611342 -44038954 - B1_Mus1 SINE Alu 0 148 2 1 1520 211 159 0 104 chrX 122611423 122611500 -44038796 + A-rich Low_complexity Low_complexity 3 71 0 1 1520 243 140 0 0 chrX 122611653 122611703 -44038593 + (T)n Simple_repeat Simple_repeat 1 50 0 1 1520 1178 41 7 0 chrX 122611705 122611850 -44038446 - B1_Mus2 SINE Alu 0 147 2 1 1520 198 71 0 0 chrX 122612090 122612118 -44038178 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1520 204 40 0 0 chrX 122612975 122613000 -44037296 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1 1520 1058 77 14 0 chrX 122613000 122613143 -44037153 - B1_Mus1 SINE Alu -2 146 2 1 1520 22 0 0 0 chrX 122613178 122613200 -44037096 + AT_rich Low_complexity Low_complexity 1 22 0 1 1520 207 0 0 0 chrX 122613248 122613271 -44037025 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1520 425 19 0 18 chrX 122613312 122613367 -44036929 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 1 1520 945 71 0 0 chrX 122613367 122613493 -44036803 - B1_Mus2 SINE Alu -10 137 12 1 1520 207 0 0 0 chrX 122613536 122613559 -44036737 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1 1520 249 33 0 0 chrX 122613720 122613750 -44036546 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 1520 193 75 50 0 chrX 122613858 122613898 -44036398 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 1 1520 195 114 0 0 chrX 122614130 122614165 -44036131 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1520 240 35 0 0 chrX 122614200 122614229 -44036067 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1520 180 0 0 0 chrX 122614544 122614564 -44035732 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1 1520 303 270 54 90 chrX 122615360 122615527 -44034769 - L1MDa LINE L1 -4132 2501 2341 1 1520 225 0 0 0 chrX 122615709 122615734 -44034562 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1520 255 31 0 0 chrX 122615975 122616007 -44034289 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1520 207 196 0 0 chrX 122616047 122616093 -44034203 + T-rich Low_complexity Low_complexity 1 46 0 1 1520 21 71 0 0 chrX 122616278 122616320 -44033976 + AT_rich Low_complexity Low_complexity 1 42 0 1 1520 23 0 0 0 chrX 122616460 122616483 -44033813 + AT_rich Low_complexity Low_complexity 1 23 0 1 1520 21 0 0 0 chrX 122616505 122616526 -44033770 + AT_rich Low_complexity Low_complexity 1 21 0 2 1520 261 57 0 0 chrX 122616824 122616859 -44033437 + (T)n Simple_repeat Simple_repeat 1 35 0 2 1520 198 0 0 0 chrX 122617002 122617024 -44033272 + (TAA)n Simple_repeat Simple_repeat 1 22 0 2 1520 283 163 26 78 chrX 122617631 122617784 -44032512 + (TAA)n Simple_repeat Simple_repeat 3 147 0 2 1520 192 97 0 0 chrX 122617927 122617958 -44032338 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1520 767 167 20 14 chrX 122617966 122618112 -44032184 - B1_Mus1 SINE Alu 0 148 2 2 1520 1331 62 0 6 chrX 122618294 122618473 -44031823 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 2 1520 855 173 0 0 chrX 122618482 122618650 -44031646 + CT-rich Low_complexity Low_complexity 2 169 0 2 1520 658 121 0 17 chrX 122618646 122618764 -44031532 + (TTC)n Simple_repeat Simple_repeat 2 117 0 2 1520 877 129 14 7 chrX 122618784 122618924 -44031372 - B1_Mus1 SINE Alu -6 142 2 2 1520 201 200 0 58 chrX 122618930 122618999 -44031297 + A-rich Low_complexity Low_complexity 3 67 0 2 1520 738 183 6 12 chrX 122619237 122619408 -44030888 + CT-rich Low_complexity Low_complexity 3 172 0 2 1520 291 139 0 0 chrX 122619413 122619456 -44030840 + (T)n Simple_repeat Simple_repeat 1 43 0 2 1520 891 122 14 7 chrX 122619475 122619615 -44030681 - B1_Mus1 SINE Alu -6 142 2 2 1520 215 267 0 49 chrX 122619621 122619743 -44030553 + A-rich Low_complexity Low_complexity 3 118 0 2 1520 659 186 6 18 chrX 122619933 122620097 -44030199 + CT-rich Low_complexity Low_complexity 3 164 0 2 1520 789 185 7 0 chrX 122620097 122620243 -44030053 - B1_Mus1 SINE Alu 0 148 2 2 1520 24 0 0 0 chrX 122620277 122620301 -44029995 + AT_rich Low_complexity Low_complexity 1 24 0 2 1520 360 97 0 0 chrX 122620353 122620415 -44029881 + (A)n Simple_repeat Simple_repeat 1 62 0 2 1520 245 241 0 0 chrX 122620467 122620546 -44029750 + A-rich Low_complexity Low_complexity 1 79 0 2 1520 327 83 27 27 chrX 122620650 122620724 -44029572 + (TTTTG)n Simple_repeat Simple_repeat 1 74 0 2 1520 816 177 0 0 chrX 122620726 122620867 -44029429 - B1_Mus1 SINE Alu -6 142 2 2 1520 315 225 25 16 chrX 122620882 122621004 -44029292 + A-rich Low_complexity Low_complexity 1 123 0 2 1520 180 0 0 0 chrX 122621017 122621037 -44029259 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1520 200 59 29 0 chrX 122621072 122621106 -44029190 + (CAAAAA)n Simple_repeat Simple_repeat 3 37 0 2 1520 23 0 0 0 chrX 122621151 122621174 -44029122 + AT_rich Low_complexity Low_complexity 1 23 0 2 1520 705 126 0 0 chrX 122621207 122621318 -44028978 + (TC)n Simple_repeat Simple_repeat 2 112 0 2 1520 793 175 7 0 chrX 122621333 122621470 -44028826 - B1_Mus1 SINE Alu -8 140 3 2 1520 672 169 0 0 chrX 122621795 122621925 -44028371 + CT-rich Low_complexity Low_complexity 3 132 0 2 1520 864 129 14 0 chrX 122621928 122622067 -44028229 - B1_Mus1 SINE Alu -6 142 2 2 1520 28 0 0 0 chrX 122622160 122622188 -44028108 + AT_rich Low_complexity Low_complexity 1 28 0 2 1520 198 0 0 0 chrX 122622279 122622301 -44027995 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 2 1520 198 0 0 0 chrX 122622357 122622379 -44027917 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1520 925 122 0 13 chrX 122622442 122622600 -44027696 + (TTTC)n Simple_repeat Simple_repeat 2 157 0 2 1520 781 162 15 0 chrX 122622603 122622739 -44027557 - B1_Mus1 SINE Alu -7 141 4 2 1520 24 0 0 0 chrX 122622776 122622800 -44027496 + AT_rich Low_complexity Low_complexity 1 24 0 2 1520 252 310 0 0 chrX 122625258 122625345 -44024951 - MurSAT1 Satellite Satellite -33 87 1 2 1520 232 330 5 5 chrX 122625842 122625985 -44024311 - MurSAT1 Satellite Satellite -2 143 1 2 1520 267 282 6 6 chrX 122626390 122626499 -44023797 - MurSAT1 Satellite Satellite -10 109 1 2 1520 257 357 0 0 chrX 122626936 122627034 -44023262 - MurSAT1 Satellite Satellite -22 98 1 2 1520 345 285 23 23 chrX 122627275 122627562 -44022734 - MurSAT1 Satellite Satellite -1 287 1 2 1520 255 336 0 0 chrX 122627966 122628075 -44022221 - MurSAT1 Satellite Satellite -4 116 1 2 1520 250 319 9 9 chrX 122628700 122628814 -44021482 - MurSAT1 Satellite Satellite -1 119 6 2 1520 287 315 11 11 chrX 122628850 122628980 -44021316 - MurSAT1 Satellite Satellite -1 130 1 2 1520 245 163 0 0 chrX 122629303 122629346 -44020950 - MurSAT1 Satellite Satellite -28 92 50 2 1520 245 163 0 0 chrX 122629684 122629727 -44020569 - MurSAT1 Satellite Satellite -28 92 50 2 1520 263 272 24 24 chrX 122630446 122630529 -44019767 - MurSAT1 Satellite Satellite -28 92 10 2 1520 266 326 16 5 chrX 122632008 122632179 -44018117 - MurSAT1 Satellite Satellite -27 172 1 2 1520 252 330 0 0 chrX 122632649 122632746 -44017550 - MurSAT1 Satellite Satellite -23 97 1 2 1520 246 309 36 9 chrX 122633162 122633273 -44017023 - MurSAT1 Satellite Satellite -2 118 5 2 1520 272 318 15 5 chrX 122634306 122634482 -44015814 - MurSAT1 Satellite Satellite -27 177 1 2 1520 226 314 9 89 chrX 122634683 122634795 -44015501 - MurSAT1 Satellite Satellite -17 103 1 2 1520 233 312 10 10 chrX 122634947 122635044 -44015252 - MurSAT1 Satellite Satellite -23 97 1 2 1520 259 323 15 5 chrX 122635455 122635631 -44014665 - MurSAT1 Satellite Satellite -27 177 1 2 1520 284 323 15 5 chrX 122636604 122636780 -44013516 - MurSAT1 Satellite Satellite -27 177 1 2 1520 269 323 26 13 chrX 122637773 122637948 -44012348 - MurSAT1 Satellite Satellite -2 177 1 2 1520 338 289 0 0 chrX 122638403 122638500 -44011796 - MurSAT1 Satellite Satellite -23 97 1 2 1520 286 295 10 5 chrX 122638831 122638974 -44011322 - MurSAT1 Satellite Satellite -21 143 1 2 1520 320 325 11 11 chrX 122639176 122639380 -44010916 - MurSAT1 Satellite Satellite -1 204 1 2 1520 228 315 35 35 chrX 122639420 122639535 -44010761 - MurSAT1 Satellite Satellite -5 115 1 2 1520 256 326 9 9 chrX 122639942 122640074 -44010222 - MurSAT1 Satellite Satellite -11 132 1 2 1520 265 24 23 23 chrX 122646181 122646224 -44004072 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 2 1520 2961 113 7 0 chrX 122646395 122646828 -44003468 + L1_Mus3 LINE L1 6197 6632 -6 2 1520 1204 74 11 6 chrX 122647579 122647756 -44002540 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 2 1520 414 11 0 0 chrX 122647757 122647850 -44002446 + (TTCC)n Simple_repeat Simple_repeat 1 93 0 2 1520 561 171 213 19 chrX 122647850 122648005 -44002291 - B2_Mm2 SINE B2 -10 185 1 2 1520 238 291 22 7 chrX 122652573 122652599 -43997697 + (TCTA)n Simple_repeat Simple_repeat 3 29 0 2 1520 445 110 11 11 chrX 122652599 122652691 -43997605 + (TATG)n Simple_repeat Simple_repeat 1 92 0 2 1520 238 291 22 7 chrX 122652691 122652799 -43997497 + (TCTA)n Simple_repeat Simple_repeat 1 110 0 2 1520 252 239 0 14 chrX 122652694 122652766 -43997530 + CT-rich Low_complexity Low_complexity 1 71 0 2 1520 536 246 59 18 chrX 122652801 122652971 -43997325 + ORR1B2 LTR MaLR 1 177 -190 2 1520 2048 211 57 76 chrX 122653036 122653109 -43997187 - RLTR21 LTR ERVK -368 1204 1131 2 1520 423 0 0 0 chrX 122653109 122653156 -43997140 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1520 2048 211 57 76 chrX 122653156 122653750 -43996546 - RLTR21 LTR ERVK -442 1130 550 2 1520 1313 221 20 78 chrX 122653790 122654134 -43996162 - RLTR21 LTR ERVK -1248 324 1 2 1520 244 295 0 39 chrX 122654502 122654629 -43995667 - Lx6 LINE L1 -17 7443 7322 2 1520 325 319 40 49 chrX 122654624 122654848 -43995448 - Lx6 LINE L1 -1334 6126 5905 2 1520 2084 197 24 31 chrX 122654854 122655037 -43995259 - MTC LTR MaLR 0 421 238 2 1520 6251 105 6 3 chrX 122655037 122655928 -43994368 + RLTR13B1 LTR ERVK 1 893 0 2 1520 2084 197 24 31 chrX 122655928 122656168 -43994128 - MTC LTR MaLR -184 237 1 2 1520 696 255 18 53 chrX 122656171 122656453 -43993843 - Lx7 LINE L1 -1796 5900 5629 2 1520 953 208 41 21 chrX 122656480 122656770 -43993526 - L1_Mur3 LINE L1 -2593 3287 2992 2 1520 5825 110 3 2 chrX 122656774 122657666 -43992630 - L1_Mus2 LINE L1 0 6566 5674 2 1520 3401 43 3 0 chrX 122657667 122658150 -43992146 - L1Md_F3 LINE L1 -562 6022 5537 2 1520 3498 57 0 0 chrX 122658141 122658596 -43991700 + L1Md_F3 LINE L1 6034 6488 -96 2 1520 2093 127 15 3 chrX 122658596 122658920 -43991376 + IAPLTR1a_Mm LTR ERVK 1 328 -9 2 1520 323 99 49 73 chrX 122658921 122659002 -43991294 + IAPEz-int LTR ERVK 1 73 -1914 2 1520 20865 43 23 19 chrX 122659016 122661763 -43988533 + IAPEz-int LTR ERVK 17 2774 -3707 2 1520 2974 20 0 0 chrX 122661761 122662118 -43988178 + IAPEz-int LTR ERVK 4001 4357 -2124 2 1520 5579 59 13 18 chrX 122662109 122662884 -43987412 + IAPEz-int LTR ERVK 5709 6479 -2 2 1520 2116 124 15 3 chrX 122662886 122663210 -43987086 + IAPLTR1a_Mm LTR ERVK 1 328 -9 2 1520 593 71 0 10 chrX 122663220 122663319 -43986977 + L1Md_F3 LINE L1 6485 6582 -2 2 1520 785 174 7 0 chrX 122663322 122663460 -43986836 - L1_Mm LINE L1 -198 5685 5547 2 1520 4684 96 15 12 chrX 122663491 122664887 -43985409 + L1Md_F LINE L1 505 1904 -3979 2 1520 448 315 20 10 chrX 122665291 122665490 -43984806 - Lx8 LINE L1 -941 6532 6332 2 1520 348 282 58 25 chrX 122665834 122666111 -43984185 - Lx8 LINE L1 -175 5672 5401 2 1520 2886 258 44 13 chrX 122666120 122666871 -43983425 + ORR1D-int LTR MaLR 455 1228 -142 2 1520 433 146 73 0 chrX 122666993 122667075 -43983221 + MERVL_2A-int LTR ERVL 5674 5761 0 2 1520 524 252 7 64 chrX 122667075 122667215 -43983081 + MT2A LTR ERVL 1 132 -401 2 1520 1826 202 12 0 chrX 122667331 122667673 -43982623 - Lx7 LINE L1 -694 7002 6657 2 1520 553 272 26 97 chrX 122667668 122667681 -43982615 + Lx7 LINE L1 7305 7317 -379 2 1520 2175 107 19 3 chrX 122667681 122668001 -43982295 + ORR1A2 LTR MaLR 1 325 -2 2 1520 553 272 26 97 chrX 122668001 122668378 -43981918 + Lx7 LINE L1 7318 7667 -29 2 1520 7324 244 34 111 chrX 122668376 122672850 -43977446 - Lx5 LINE L1 -19 7031 2881 2 1520 328 350 20 27 chrX 122672850 122672997 -43977299 - RLTR22_Mur LTR ERVK -73 1249 1104 2 1520 860 293 115 79 chrX 122673143 122673948 -43976348 - RLTR22_Mur LTR ERVK -1046 802 1 2 1520 814 306 8 14 chrX 122673948 122674309 -43975987 - Lx5 LINE L1 -6466 1262 904 2 1520 1996 0 0 0 chrX 122674816 122675040 -43975256 - L1Md_A LINE L1 0 6582 6359 2 1520 464 37 0 0 chrX 122675040 122675094 -43975202 + L1Md_T LINE L1 6119 6172 -410 2 1520 333 318 68 82 chrX 122675094 122675300 -43974996 - MTE2a LTR MaLR -10 369 167 2 1520 7166 48 1 1 chrX 122675301 122676192 -43974104 - L1Md_F3 LINE L1 -14 6570 5680 2 1520 362 287 72 63 chrX 122676192 122676337 -43973959 - MTE2a LTR MaLR -181 198 65 2 1520 183 42 0 0 chrX 122676337 122676361 -43973935 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1520 939 126 0 0 chrX 122676363 122676498 -43973798 - B1_Mus2 SINE Alu -11 136 2 2 1520 269 340 34 91 chrX 122676498 122676584 -43973712 - MTE2a LTR MaLR -337 82 1 2 1520 1230 273 94 24 chrX 122676653 122676994 -43973302 + ORR1D1 LTR MaLR 9 373 -1 2 1520 1924 241 77 28 chrX 122677462 122677970 -43972326 - RLTR20B3 LTR ERVK -44 533 1 2 1520 21 36 0 0 chrX 122678003 122678031 -43972265 + AT_rich Low_complexity Low_complexity 1 28 0 2 1520 419 375 43 34 chrX 122678129 122678336 -43971960 + HAL1 LINE L1 162 370 -2137 2 1520 200 211 0 0 chrX 122678765 122678803 -43971493 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 3 1520 243 0 0 0 chrX 122678947 122678974 -43971322 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1520 1592 85 10 17 chrX 122679255 122679490 -43970806 + RLTR13A LTR ERVK 1 231 -577 3 23 32071 39 2 3 chrX 122679490 122684126 -43966170 - L1Md_T LINE L1 -43 6539 1908 3 1521 1703 121 10 2 chrX 122684126 122684403 -43965893 + RLTR13A LTR ERVK 72 354 -501 3 1521 28 48 0 0 chrX 122684427 122684469 -43965827 + AT_rich Low_complexity Low_complexity 1 42 0 3 1521 270 178 0 0 chrX 122684599 122684644 -43965652 + L1_Mur3 LINE L1 3480 3524 -2356 3 1521 297 345 11 0 chrX 122684702 122684789 -43965507 - RSINE1 SINE B4 -10 155 68 3 1521 2537 156 14 49 chrX 122684984 122685491 -43964805 - Lx2B LINE L1 -708 6292 5804 3 1521 210 37 0 0 chrX 122685491 122685518 -43964778 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1521 345 0 76 15 chrX 122685554 122685620 -43964676 + (TTTTTG)n Simple_repeat Simple_repeat 3 72 0 3 1521 711 109 0 0 chrX 122685621 122685722 -43964574 - B1_Mus2 SINE Alu 0 147 47 3 1521 308 186 77 128 chrX 122685656 122685773 -43964523 - MT2B LTR ERVL -337 264 154 3 1521 2844 195 41 13 chrX 122685774 122686381 -43963915 - Lx2B LINE L1 -159 5727 5104 3 1521 2416 199 52 16 chrX 122686372 122686872 -43963424 + Lx2B LINE L1 6477 6994 -6 3 1521 346 347 115 70 chrX 122686973 122687014 -43963282 - MT2A LTR ERVL -1 600 547 3 1521 444 19 0 0 chrX 122687014 122687067 -43963229 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1521 902 283 105 30 chrX 122687067 122687453 -43962843 - MT2A LTR ERVL -55 546 1 3 1521 298 321 0 0 chrX 122687772 122687853 -43962443 + ORR1D2 LTR MaLR 6 86 -284 3 1521 5024 116 5 1 chrX 122687957 122688702 -43961594 + L1_Mm LINE L1 4956 5703 -180 3 1521 1694 161 37 6 chrX 122688698 122689022 -43961274 - Lx3_Mus LINE L1 -769 6240 5907 3 1521 467 311 46 46 chrX 122689682 122690034 -43960262 - MuLV-int LTR ERV1 -147 7459 7159 3 1521 630 107 19 0 chrX 122691572 122691675 -43958621 - RMER17D2 LTR ERVK -2 807 703 3 1521 1083 130 30 125 chrX 122691675 122691939 -43958357 - Lx3C LINE L1 -849 6127 5889 3 1521 1098 262 22 25 chrX 122692168 122692442 -43957854 - ORR1B1 LTR MaLR -6 388 116 3 1521 2711 272 64 21 chrX 122692445 122693431 -43956865 + RMER1B Other Other 25 1062 -4 3 1521 189 74 0 0 chrX 122693700 122693727 -43956569 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1521 455 265 84 15 chrX 122694336 122694539 -43955757 - L1MD3 LINE L1 -13 7982 7766 3 1521 774 262 72 96 chrX 122694616 122694950 -43955346 - ORR1E LTR MaLR -10 349 24 3 1521 501 47 0 0 chrX 122695078 122695142 -43955154 + (TTCC)n Simple_repeat Simple_repeat 2 65 0 3 1521 496 324 37 0 chrX 122695258 122695394 -43954902 + RSINE1 SINE B4 3 143 -22 3 1521 318 50 0 0 chrX 122695417 122695457 -43954839 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1521 267 31 0 0 chrX 122695457 122695489 -43954807 + (CCA)n Simple_repeat Simple_repeat 1 32 0 3 1521 229 250 0 137 chrX 122695527 122695547 -43954749 + LTR68 LTR ERV1 199 214 -526 3 1521 249 109 0 0 chrX 122695547 122695593 -43954703 + (CAGAGA)n Simple_repeat Simple_repeat 2 47 0 3 1521 229 250 0 137 chrX 122695593 122695674 -43954622 + LTR68 LTR ERV1 215 286 -454 3 1521 1801 176 3 3 chrX 122695674 122696015 -43954281 - Lx2 LINE L1 -753 6244 5904 3 1521 786 175 0 0 chrX 122696015 122696169 -43954127 + Lx2 LINE L1 6844 6997 0 3 1521 1136 259 57 83 chrX 122696185 122696572 -43953724 + ORR1C2 LTR MaLR 8 384 0 3 1521 210 386 29 29 chrX 122696572 122696665 -43953631 - PB1D9 SINE Alu -18 102 10 3 1521 204 40 0 0 chrX 122697409 122697434 -43952862 + (CATA)n Simple_repeat Simple_repeat 2 26 0 3 1521 363 96 0 0 chrX 122697636 122697688 -43952608 + (T)n Simple_repeat Simple_repeat 1 52 0 3 1521 1151 75 0 0 chrX 122697688 122697834 -43952462 - B1_Mm SINE Alu 0 147 2 3 1521 413 325 16 24 chrX 122698067 122698190 -43952106 + B3 SINE B2 2 123 -93 3 1521 784 178 26 7 chrX 122698213 122698366 -43951930 + Lx2B LINE L1 6156 6311 -689 3 1521 1515 248 39 30 chrX 122698370 122698802 -43951494 + Lx3C LINE L1 6539 6974 -2 3 1521 225 0 0 0 chrX 122699059 122699084 -43951212 + (TTTTTG)n Simple_repeat Simple_repeat 6 30 0 3 1521 341 239 0 32 chrX 122699084 122699179 -43951117 + RNLTR23 LTR ERVK 551 642 0 3 1521 552 304 147 20 chrX 122700089 122700381 -43949915 + Lx7 LINE L1 7036 7364 -332 3 1521 189 107 0 0 chrX 122700381 122700409 -43949887 + (TC)n Simple_repeat Simple_repeat 1 28 0 3 1521 458 46 15 0 chrX 122700409 122700474 -43949822 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 1521 228 310 10 10 chrX 122700568 122700669 -43949627 + Lx7 LINE L1 7579 7679 -17 3 1521 207 0 0 0 chrX 122700673 122700696 -43949600 + (TAA)n Simple_repeat Simple_repeat 1 23 0 3 1521 2821 59 53 3 chrX 122700996 122701373 -43948923 - MTA_Mm LTR MaLR 0 396 1 3 1521 423 237 35 78 chrX 122702221 122702363 -43947933 + Lx9 LINE L1 6962 7097 -547 3 1521 320 330 58 15 chrX 122702417 122702623 -43947673 + Lx9 LINE L1 7225 7439 -205 3 1521 450 0 0 0 chrX 122702640 122702690 -43947606 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1521 30 27 0 0 chrX 122702787 122702824 -43947472 + AT_rich Low_complexity Low_complexity 1 37 0 3 1521 994 323 22 25 chrX 122703003 122703368 -43946928 + MTE2a-int LTR MaLR 37 400 -1180 3 1521 1615 316 153 40 chrX 122703448 122704200 -43946096 + MTE2a-int LTR MaLR 743 1579 -1 3 1521 708 305 46 113 chrX 122704201 122704571 -43945725 + MTE2a LTR MaLR 1 345 -34 3 1521 229 51 51 0 chrX 122704728 122704767 -43945529 + (TTA)n Simple_repeat Simple_repeat 3 43 0 3 1521 403 365 14 20 chrX 122704773 122704921 -43945375 - RSINE1 SINE B4 -15 150 4 3 1521 291 28 0 0 chrX 122704939 122704975 -43945321 + (TTTTTG)n Simple_repeat Simple_repeat 3 38 0 3 1521 249 319 26 26 chrX 122704976 122705092 -43945204 - PB1D10 SINE Alu 0 117 2 3 1521 1047 299 29 17 chrX 122705178 122705590 -43944706 - MTD LTR MaLR 0 419 3 3 1521 581 322 24 14 chrX 122705677 122705888 -43944408 + ID_B1 SINE B4 4 216 -8 3 1521 207 0 0 0 chrX 122706221 122706244 -43944052 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1521 311 340 234 0 chrX 122706246 122706387 -43943909 - B3A SINE B2 -17 181 8 3 1521 452 225 11 0 chrX 122706558 122706647 -43943649 - ID_B1 SINE B4 0 224 135 3 1521 952 66 15 0 chrX 122707631 122707768 -43942528 + (GA)n Simple_repeat Simple_repeat 1 139 0 3 1521 392 35 0 34 chrX 122707818 122707877 -43942419 + (TTTA)n Simple_repeat Simple_repeat 1 57 0 3 1521 6898 144 13 34 chrX 122707880 122709112 -43941184 - Lx3A LINE L1 -6 6975 5770 3 1521 895 54 92 0 chrX 122709112 122709242 -43941054 - L1_Mm LINE L1 -2467 3416 3275 3 1521 569 116 0 0 chrX 122709242 122709328 -43940968 + 4.5SRNA scRNA scRNA 7 92 -2 3 1521 5128 66 0 6 chrX 122709328 122709996 -43940300 - L1Md_F2 LINE L1 -12 6570 5907 3 1521 7887 55 1 0 chrX 122710027 122711010 -43939286 + L1Md_F2 LINE L1 5587 6570 -12 3 1521 1928 125 17 29 chrX 122711143 122711504 -43938792 - RLTR22_Mus LTR ERVK -983 825 354 3 1521 423 91 0 0 chrX 122711513 122711579 -43938717 - L1_Mm LINE L1 -2157 3726 3661 3 1521 13574 138 44 21 chrX 122711584 122713589 -43936707 + L1_Mus2 LINE L1 2128 4232 -1651 3 1521 345 24 0 0 chrX 122713589 122713631 -43936665 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 3 1521 13574 138 44 21 chrX 122713631 122713664 -43936632 + L1_Mus2 LINE L1 4233 4233 -1650 3 1521 2387 61 10 0 chrX 122713664 122713977 -43936319 - L1Md_F2 LINE L1 0 6582 6267 3 1521 13574 138 44 21 chrX 122713977 122714380 -43935916 + L1_Mus2 LINE L1 4233 4627 -1256 3 1521 2532 58 0 3 chrX 122714388 122714716 -43935580 + IAPEY2_LTR LTR ERVK 31 357 0 3 1521 786 128 52 39 chrX 122714718 122714872 -43935424 + IAPLTR4_I LTR ERVK 24 179 -1291 3 1521 9225 128 13 19 chrX 122714870 122716338 -43933958 + IAPEY3-int LTR ERVK 524 1982 -5698 3 1521 3444 70 11 0 chrX 122716315 122716760 -43933536 + IAPEY3-int LTR ERVK 2238 2687 -4993 3 1521 433 85 0 0 chrX 122716755 122716814 -43933482 + IAPEY3-int LTR ERVK 4852 4910 -2770 3 1521 3890 121 32 7 chrX 122716814 122717414 -43932882 + IAPEy-int LTR ERVK 6896 7510 -3 3 1521 2908 67 0 0 chrX 122717416 122717773 -43932523 + IAPEY2_LTR LTR ERVK 1 357 0 3 1521 7978 115 11 3 chrX 122717774 122719696 -43930600 + L1_Mus2 LINE L1 4623 6566 0 3 1521 2363 116 16 6 chrX 122719699 122720064 -43930232 - RLTR22_Mus LTR ERVK -1437 371 3 3 1521 11350 148 42 7 chrX 122720066 122722185 -43928111 - L1_Mur1 LINE L1 -1184 4702 2510 3 1521 1138 236 16 75 chrX 122722185 122722492 -43927804 - RLTR9C LTR ERVK 0 393 105 3 1521 456 92 0 26 chrX 122722503 122722581 -43927715 - ETnERV2-int LTR ERVK -4 7402 7327 3 1521 3368 204 27 39 chrX 122722791 122724832 -43925464 - ETnERV2-int LTR ERVK -3321 4085 2357 3 1521 834 164 0 24 chrX 122725400 122725569 -43924727 - RLTR13D1 LTR ERVK -156 650 486 3 1521 2203 190 45 8 chrX 122725569 122726053 -43924243 - ETnERV2-int LTR ERVK -4409 2997 2496 3 1521 3721 203 28 106 chrX 122726080 122727349 -43922947 - MMETn-int LTR ERVK -3675 1169 1 3 1521 1613 197 32 64 chrX 122727350 122727756 -43922540 - RLTR9C LTR ERVK 0 393 1 3 1521 4561 174 72 51 chrX 122727756 122730346 -43919950 - L1_Mur1 LINE L1 -3371 2515 71 3 1521 216 86 0 0 chrX 122730550 122730585 -43919711 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1521 589 286 35 25 chrX 122730936 122731137 -43919159 - B3 SINE B2 -12 204 2 3 1521 1316 212 99 17 chrX 122731200 122731555 -43918741 + ORR1C1 LTR MaLR 1 384 0 3 1521 1150 255 25 3 chrX 122731555 122731838 -43918458 + ORR1C1-int LTR MaLR 1 289 -1220 3 1521 4681 47 0 3 chrX 122731838 122732433 -43917863 - L1Md_F2 LINE L1 -49 6533 5941 3 1521 371 202 22 11 chrX 122732490 122732588 -43917708 + ORR1C1-int LTR MaLR 784 945 -1018 3 1521 236 171 0 0 chrX 122732624 122732665 -43917631 - RLTR15 LTR ERVK -318 41 1 3 1521 1420 219 68 57 chrX 122732665 122733018 -43917278 + ORR1C1 LTR MaLR 22 378 0 3 1521 641 354 0 5 chrX 122733870 122734066 -43916230 - B3 SINE B2 -5 211 17 3 1521 271 89 18 18 chrX 122734754 122734811 -43915485 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1521 6350 110 6 1 chrX 122734924 122735898 -43914398 - L1_Mus3 LINE L1 -3 6635 5657 3 1521 878 73 8 0 chrX 122735959 122736082 -43914214 + (GA)n Simple_repeat Simple_repeat 1 124 0 3 1521 210 179 0 0 chrX 122736235 122736291 -43914005 + A-rich Low_complexity Low_complexity 5 60 0 3 1521 477 0 0 0 chrX 122737619 122737672 -43912624 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1521 388 256 24 8 chrX 122738928 122739054 -43911242 + CT-rich Low_complexity Low_complexity 1 128 0 3 1521 306 331 48 72 chrX 122739056 122739222 -43911074 - HAL1-3A_ME LINE L1 -411 2447 2286 3 1521 405 232 27 18 chrX 122739231 122739456 -43910840 + CT-rich Low_complexity Low_complexity 1 227 0 3 1521 213 159 15 31 chrX 122739496 122739561 -43910735 + CT-rich Low_complexity Low_complexity 3 66 0 3 1521 213 331 28 11 chrX 122739595 122739772 -43910524 + CT-rich Low_complexity Low_complexity 1 180 0 3 1521 312 328 23 47 chrX 122739861 122739989 -43910307 + HAL1-3A_ME LINE L1 2665 2789 -69 3 1521 331 298 14 28 chrX 122740001 122740146 -43910150 + GA-rich Low_complexity Low_complexity 4 146 0 4 1521 1166 100 0 6 chrX 122740237 122740418 -43909878 + (GA)n Simple_repeat Simple_repeat 1 180 0 4 1521 372 339 14 10 chrX 122740566 122740784 -43909512 + GA-rich Low_complexity Low_complexity 1 218 0 4 1521 334 292 99 35 chrX 122740785 122740927 -43909369 + HAL1-3A_ME LINE L1 2291 2441 -417 4 1521 227 307 8 36 chrX 122741036 122741312 -43908984 + CT-rich Low_complexity Low_complexity 1 268 0 4 1521 36023 44 2 3 chrX 122741628 122748242 -43902054 - L1Md_T LINE L1 0 6585 66 4 1521 203 327 29 0 chrX 122748243 122748347 -43901949 + CT-rich Low_complexity Low_complexity 1 107 0 4 1521 471 324 3 29 chrX 122748442 122748723 -43901573 + GA-rich Low_complexity Low_complexity 1 273 0 4 1521 396 0 0 0 chrX 122748723 122748767 -43901529 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1521 471 339 0 0 chrX 122748767 122748785 -43901511 + polypurine Low_complexity Low_complexity 162 179 0 4 1521 282 333 7 14 chrX 122748819 122748965 -43901331 + GA-rich Low_complexity Low_complexity 2 146 0 4 1521 372 292 0 20 chrX 122749309 122749456 -43900840 + GA-rich Low_complexity Low_complexity 1 144 0 4 1521 1398 80 9 6 chrX 122749626 122749943 -43900353 + (TTTC)n Simple_repeat Simple_repeat 1 318 0 4 1521 327 317 6 24 chrX 122749943 122750108 -43900188 + CT-rich Low_complexity Low_complexity 2 163 0 4 1521 3167 22 0 3 chrX 122750255 122750623 -43899673 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1521 52805 24 17 2 chrX 122750623 122757006 -43893290 + IAPEz-int LTR ERVK 8 6481 0 4 1521 3154 25 0 3 chrX 122757006 122757374 -43892922 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1521 255 352 0 22 chrX 122757529 122757712 -43892584 + GA-rich Low_complexity Low_complexity 2 180 0 4 1521 204 326 22 39 chrX 122757785 122757967 -43892329 + GA-rich Low_complexity Low_complexity 2 180 0 4 1521 406 283 0 30 chrX 122758090 122758221 -43892075 + CT-rich Low_complexity Low_complexity 2 128 0 4 1521 257 333 7 15 chrX 122758245 122758382 -43891914 + CT-rich Low_complexity Low_complexity 1 136 0 4 1521 269 57 0 0 chrX 122758477 122758512 -43891784 + L1_Mur1 LINE L1 5537 5571 -315 4 1521 197 363 19 10 chrX 122758791 122758894 -43891402 + L2a LINE L2 2367 2470 -949 4 1521 435 374 92 0 chrX 122758997 122759224 -43891072 + L2a LINE L2 2929 3176 -250 4 1521 747 358 41 37 chrX 122759910 122760635 -43889661 - RMER15-int LTR ERVL -11 4988 4261 4 1521 634 284 23 0 chrX 122760635 122760850 -43889446 + URR1B DNA MER1_type 2 221 -4 4 1521 720 390 7 62 chrX 122761342 122761534 -43888762 - B4A SINE B4 0 292 114 4 1521 1187 61 18 0 chrX 122761534 122761697 -43888599 + L1Md_F2 LINE L1 6416 6581 -1 4 1521 720 390 7 62 chrX 122761697 122761813 -43888483 - B4A SINE B4 -179 113 1 4 1521 865 301 12 24 chrX 122762056 122762318 -43887978 - MTE2b LTR MaLR 0 421 119 4 1521 519 334 65 22 chrX 122762406 122762730 -43887566 - MTE-int LTR MaLR 0 1580 1243 4 1521 11980 170 30 13 chrX 122762731 122765730 -43884566 + Lx3C LINE L1 3363 6408 -568 4 1521 11756 154 41 1 chrX 122765732 122767727 -43882569 - L1_Mus3 LINE L1 -702 5936 3846 4 1521 288 0 0 0 chrX 122767727 122767759 -43882537 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 1521 11756 165 49 2 chrX 122767759 122768124 -43882172 - L1_Mus3 LINE L1 -2038 3845 3467 4 1521 4062 140 13 9 chrX 122768124 122768794 -43881502 + L1_Mus3 LINE L1 5966 6638 0 4 1521 1976 221 104 8 chrX 122768794 122769324 -43880972 + Lx3C LINE L1 6391 6971 -5 4 1521 729 129 0 0 chrX 122769825 122769941 -43880355 + (TTCC)n Simple_repeat Simple_repeat 3 118 0 4 1521 307 298 7 28 chrX 122769988 122770133 -43880163 + CT-rich Low_complexity Low_complexity 2 143 0 4 1521 3649 50 0 0 chrX 122770429 122770872 -43879424 - L1Md_T LINE L1 0 6582 6140 4 1521 3359 207 13 82 chrX 122771321 122772085 -43878211 - RMER6D LTR ERVK -9 711 1 4 1521 1178 250 146 39 chrX 122773660 122774133 -43876163 - ORR1D2-int LTR MaLR -23 1347 825 4 1521 1624 295 99 62 chrX 122774610 122775355 -43874941 - ORR1D2-int LTR MaLR -545 825 53 4 1521 257 51 32 48 chrX 122775357 122775419 -43874877 + (CAAAAA)n Simple_repeat Simple_repeat 2 62 0 4 1521 270 306 23 12 chrX 122775485 122775571 -43874725 - ORR1D2 LTR MaLR -27 343 257 4 1521 1019 235 57 18 chrX 122775644 122775926 -43874370 - Lx5 LINE L1 -7 7051 6746 4 1521 24 0 0 0 chrX 122775948 122775972 -43874324 + AT_rich Low_complexity Low_complexity 1 24 0 4 1521 224 91 23 0 chrX 122776013 122776057 -43874239 + (TTTTTG)n Simple_repeat Simple_repeat 6 50 0 4 1521 378 0 0 0 chrX 122776067 122776109 -43874187 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 1521 228 67 0 0 chrX 122776109 122776139 -43874157 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1521 1603 249 0 6 chrX 122776139 122776502 -43873794 - Lx5 LINE L1 -318 6732 6372 4 1521 1425 269 94 38 chrX 122776503 122777110 -43873186 + RMER19A LTR ERVK 1 736 -1 4 1521 2953 201 33 47 chrX 122777111 122778306 -43871990 - Lx5 LINE L1 -670 6380 5176 4 1521 277 329 36 128 chrX 122778307 122778502 -43871794 + RLTR24 LTR ERV1 278 454 -75 4 1521 647 331 71 49 chrX 122778504 122778812 -43871484 - ORR1D2 LTR MaLR -55 315 1 4 1521 726 322 72 23 chrX 122778863 122779168 -43871128 - MTE2b-int LTR MaLR -708 872 553 4 1521 540 330 27 5 chrX 122779184 122779370 -43870926 - MTE2b-int LTR MaLR -1178 402 213 4 1521 1333 287 32 22 chrX 122779375 122779778 -43870518 + MTD LTR MaLR 1 407 -12 4 1521 550 328 15 29 chrX 122779783 122779987 -43870309 - MTE2b-int LTR MaLR -1374 206 6 4 1521 616 338 41 14 chrX 122779995 122780358 -43869938 - MTE2b LTR MaLR -2 377 5 4 1521 7607 52 3 0 chrX 122780501 122781663 -43868633 - L1Md_F2 LINE L1 0 6582 5438 4 1521 3159 14 5 5 chrX 122781663 122782030 -43868266 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1521 25115 17 1 0 chrX 122782030 122784983 -43865313 - IAPEz-int LTR ERVK 0 6481 3525 4 1521 869 81 24 0 chrX 122784983 122785106 -43865190 - IAPEz-int LTR ERVK -2770 4910 4785 4 1521 1669 123 4 15 chrX 122785103 122785368 -43864928 - IAPEz-int LTR ERVK -5183 2497 2236 4 1521 424 38 0 0 chrX 122785367 122785420 -43864876 - IAPEz-int LTR ERVK -5070 1411 1359 4 1521 3256 85 3 23 chrX 122785420 122786194 -43864102 - IAPEz-int LTR ERVK -5819 662 3 4 1521 3159 14 5 5 chrX 122786196 122786563 -43863733 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1521 5437 64 0 1 chrX 122786563 122787296 -43863000 - MusHAL1 LINE L1 -440 5443 4712 4 1521 3424 76 0 1 chrX 122787296 122787823 -43862473 - MusHAL1 LINE L1 -4118 1765 1241 4 1521 201 39 0 0 chrX 122787841 122787867 -43862429 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 1521 32706 80 8 1 chrX 122787872 122794002 -43856294 - L1Md_F3 LINE L1 -25 6559 446 4 1521 633 360 43 37 chrX 122794003 122794490 -43855806 - RMER15-int LTR ERVL -3370 1629 1140 4 1521 332 276 0 22 chrX 122794578 122794667 -43855629 - B4A SINE B4 0 292 206 4 1521 210 329 0 14 chrX 122794793 122794864 -43855432 + GA-rich Low_complexity Low_complexity 3 72 0 4 1521 258 152 0 0 chrX 122794887 122794946 -43855350 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 4 1521 3261 199 67 73 chrX 122795050 122796073 -43854223 - RMER17C-int LTR ERVK 0 3238 2223 4 1521 287 195 48 96 chrX 122796165 122796290 -43854006 - RMER17C-int LTR ERVK -2829 3308 3190 4 1521 1086 224 3 38 chrX 122796289 122796577 -43853719 - RMER17C-int LTR ERVK -1015 2223 1946 4 1521 5263 128 10 7 chrX 122796586 122797468 -43852828 - L1_Mus3 LINE L1 -12 6642 5771 4 1521 936 116 0 0 chrX 122797468 122797606 -43852690 + B1_Mm SINE Alu 1 138 -9 4 1521 5030 138 3 14 chrX 122797606 122798084 -43852212 - L1_Mus3 LINE L1 -101 5782 5365 4 1521 3818 195 2 9 chrX 122798082 122798884 -43851412 + L1_Mus3 LINE L1 4561 5357 -526 4 1521 1816 236 58 39 chrX 122798888 122799683 -43850613 - RMER17C-int LTR ERVK -3486 2036 1425 4 1521 274 232 0 68 chrX 122799924 122799998 -43850298 - RMER17C-int LTR ERVK -2005 1233 1165 4 1521 25 51 0 0 chrX 122800207 122800246 -43850050 + AT_rich Low_complexity Low_complexity 1 39 0 4 1521 671 115 49 0 chrX 122800705 122800827 -43849469 - L1_Mus1 LINE L1 -64 6503 6376 4 1521 485 335 22 65 chrX 122800903 122800914 -43849382 - B3A SINE B2 -17 181 171 4 1521 183 129 0 0 chrX 122800914 122800945 -43849351 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 1521 321 26 0 0 chrX 122800953 122800991 -43849305 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1521 607 335 22 65 chrX 122800991 122801155 -43849141 - B3 SINE B2 -47 169 5 4 1521 230 308 109 9 chrX 122801160 122801389 -43848907 - Charlie2b DNA MER1_type -33 2749 2498 4 1521 3753 121 135 3 chrX 122801389 122802069 -43848227 + L1_Mus3 LINE L1 5865 6634 -4 4 1521 390 191 0 0 chrX 122802302 122802315 -43847981 + A-rich Low_complexity Low_complexity 1 13 0 4 1521 1079 95 0 7 chrX 122802315 122802463 -43847833 + B1_Mus2 SINE Alu 1 147 0 4 1521 390 191 0 0 chrX 122802463 122802538 -43847758 + A-rich Low_complexity Low_complexity 14 88 0 4 1521 36716 7 0 0 chrX 122802543 122807924 -43842372 + L1Md_A LINE L1 205 5586 -297 4 1521 9040 4 0 0 chrX 122807924 122808919 -43841377 + L1Md_A LINE L1 5587 6581 -1 4 1521 343 298 124 30 chrX 122808925 122809327 -43840969 - Charlie2b DNA MER1_type -564 2218 1779 4 1521 7708 105 7 2 chrX 122809456 122811063 -43839233 + L1_Mus2 LINE L1 4652 6269 -297 4 1521 9895 144 23 22 chrX 122811058 122813390 -43836906 - L1VL4 LINE L1 -866 2951 628 4 1521 473 224 44 7 chrX 122813398 122813533 -43836763 - L1VL4 LINE L1 -5813 706 567 4 1521 444 268 21 86 chrX 122813584 122813865 -43836431 - L1VL1 LINE L1 -6027 395 9 4 1521 2803 121 11 123 chrX 122813878 122814157 -43836139 - MusHAL1 LINE L1 -2076 636 362 4 1521 1243 93 5 40 chrX 122814157 122814359 -43835937 - B2_Mm2 SINE B2 0 195 1 4 190 2803 121 11 123 chrX 122814359 122814777 -43835519 - MusHAL1 LINE L1 -2351 361 17 4 1522 1083 160 39 89 chrX 122814777 122815058 -43835238 - RLTRETN_Mm LTR ERVK 0 322 56 4 1522 526 258 44 17 chrX 122815247 122815428 -43834868 + SRV_MM-int LTR ERVK 1790 1975 -4192 4 1522 2266 111 41 3 chrX 122815426 122815788 -43834508 + MMETn-int LTR ERVK 4133 4508 -336 4 1522 255 292 147 66 chrX 122815789 122815987 -43834309 + RLTR13A2 LTR ERVK 277 490 -468 4 1522 494 185 7 118 chrX 122815987 122816140 -43834156 + MMETn-int LTR ERVK 4709 4844 0 4 1522 354 80 0 0 chrX 122816140 122816190 -43834106 + RLTRETN_Mm LTR ERVK 1 50 -272 4 1522 12567 65 2 2 chrX 122816215 122817875 -43832421 - ETnERV-int LTR ERVK -1654 1660 1 4 1522 1337 152 30 72 chrX 122817875 122818209 -43832087 - RLTRETN_Mm LTR ERVK 0 322 3 4 1522 2695 206 55 72 chrX 122818211 122819135 -43831161 - L1Md_F LINE L1 -5411 1208 327 4 1522 750 265 2 102 chrX 122819265 122819606 -43830690 - L1VL2 LINE L1 -5933 485 4 4 1522 1136 69 0 20 chrX 122819843 122819991 -43830305 + B1_Mus2 SINE Alu 2 146 -1 4 1522 273 300 16 98 chrX 122820384 122820506 -43829790 - RMER12 LTR ERVK -471 851 740 4 1522 1058 109 0 0 chrX 122821158 122821305 -43828991 - B1_Mus1 SINE Alu 0 148 2 4 1522 200 265 14 14 chrX 122821772 122821841 -43828455 + A-rich Low_complexity Low_complexity 2 70 0 4 1522 261 326 10 10 chrX 122821916 122822012 -43828284 - Lx7 LINE L1 -495 7201 7106 4 1522 667 211 98 12 chrX 122822019 122822182 -43828114 + RLTR28B LTR ERVL 1 177 -304 4 1522 269 246 0 55 chrX 122822326 122822399 -43827897 + RLTR28B LTR ERVL 446 514 -10 4 1522 1579 262 99 23 chrX 122822864 122823740 -43826556 + Lx6 LINE L1 6722 7696 0 4 1522 241 329 66 0 chrX 122823786 122823862 -43826434 - ID4 SINE ID -2 81 1 4 1522 301 279 0 71 chrX 122824234 122824319 -43825977 + MT2B LTR ERVL 155 233 -368 4 1522 432 214 26 7 chrX 122824249 122824369 -43825927 + B1_Mus2 SINE Alu 6 128 -21 4 1522 32 95 0 0 chrX 122824700 122824795 -43825501 + AT_rich Low_complexity Low_complexity 1 95 0 4 1522 32 0 0 0 chrX 122825157 122825189 -43825107 + AT_rich Low_complexity Low_complexity 1 32 0 4 1522 432 0 0 0 chrX 122825710 122825758 -43824538 + (TTA)n Simple_repeat Simple_repeat 3 50 0 4 1522 411 160 0 0 chrX 122826323 122826398 -43823898 + T-rich Low_complexity Low_complexity 1 75 0 4 1522 938 138 14 0 chrX 122826398 122826543 -43823753 - B1_Mus1 SINE Alu 0 148 2 4 1522 2464 318 81 51 chrX 122827100 122830048 -43820248 - RNERVK23-int LTR ERVK -2510 5707 2671 4 1522 478 261 0 0 chrX 122830748 122830867 -43819429 - RLTR45-int LTR ERVK -6433 811 693 5 1522 279 79 0 0 chrX 122831183 122831221 -43819075 + (T)n Simple_repeat Simple_repeat 1 38 0 5 1522 522 226 0 0 chrX 122831256 122831380 -43818916 - RLTR45-int LTR ERVK -6552 692 569 5 1522 1608 263 35 15 chrX 122832287 122832809 -43817487 - RLTR45-int LTR ERVK -6710 534 3 5 1522 616 259 61 38 chrX 122832811 122833024 -43817272 - RLTR45 LTR ERVK 0 482 265 5 1522 293 0 27 0 chrX 122833391 122833428 -43816868 + (TTG)n Simple_repeat Simple_repeat 2 39 0 5 1522 231 36 0 0 chrX 122833428 122833455 -43816841 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 5 1522 749 167 8 0 chrX 122833457 122833583 -43816713 - B1_Mus2 SINE Alu -19 128 2 5 1522 318 26 0 0 chrX 122833750 122833789 -43816507 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1522 21 36 0 0 chrX 122833871 122833899 -43816397 + AT_rich Low_complexity Low_complexity 1 28 0 5 1522 935 113 13 0 chrX 122834026 122834177 -43816119 + (TTTC)n Simple_repeat Simple_repeat 1 153 0 5 1522 724 182 8 0 chrX 122834179 122834311 -43815985 - B1_Mus1 SINE Alu -14 134 2 5 1522 1033 117 7 0 chrX 122834343 122834488 -43815808 + B1_Mus2 SINE Alu 2 147 0 5 1522 180 0 0 0 chrX 122834582 122834602 -43815694 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1522 225 23 65 43 chrX 122834645 122834691 -43815605 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 5 1522 940 103 13 27 chrX 122834875 122835024 -43815272 - B1_Mus1 SINE Alu 0 148 2 5 1522 182 149 21 65 chrX 122835047 122835140 -43815156 + A-rich Low_complexity Low_complexity 2 90 0 5 1522 32477 55 3 7 chrX 122835141 122840323 -43809973 + L1Md_F3 LINE L1 434 5586 -297 5 1522 7708 60 4 3 chrX 122840324 122841306 -43808990 + L1Md_F3 LINE L1 5588 6570 -14 5 1522 740 173 0 16 chrX 122841317 122841446 -43808850 + RMER5 LTR ERV1 399 525 -9 5 1522 496 273 75 28 chrX 122841479 122841814 -43808482 - L1MB8 LINE L1 -105 6075 5730 5 1522 1640 234 32 6 chrX 122841832 122842330 -43807966 + Lx4B LINE L1 3694 4204 -1673 5 1522 3833 136 6 11 chrX 122842376 122843029 -43807267 - Lx2 LINE L1 -192 6805 6156 5 1522 4026 241 38 95 chrX 122843018 122845521 -43804775 + Lx4B LINE L1 4683 7425 -35 5 1522 519 256 87 90 chrX 122845511 122845867 -43804429 - Lx7 LINE L1 -29 7667 7313 5 1522 2196 115 16 3 chrX 122845867 122846190 -43804106 - ORR1A2 LTR MaLR 0 327 1 5 1522 1773 197 9 0 chrX 122846195 122846540 -43803756 + Lx7 LINE L1 6655 7002 -694 5 1522 547 282 0 34 chrX 122846647 122846794 -43803502 - MT2A LTR ERVL -391 142 1 5 1522 372 153 14 0 chrX 122846794 122846866 -43803430 - MERVL_2A-int LTR ERVL 0 5761 5689 5 1522 3011 248 44 13 chrX 122846998 122847749 -43802547 - ORR1A2-int LTR MaLR -142 1228 455 5 1522 363 293 55 35 chrX 122847770 122848035 -43802261 + Lx8 LINE L1 5447 5672 -175 5 1522 391 330 20 5 chrX 122848379 122848577 -43801719 + Lx8 LINE L1 6332 6532 -941 5 1522 5825 92 5 5 chrX 122849935 122850764 -43799532 - RLTR22_Mus LTR ERVK -979 829 1 5 1522 830 149 7 0 chrX 122850764 122850905 -43799391 - Lx LINE L1 -672 5982 5841 5 1522 1211 186 23 4 chrX 122850906 122851165 -43799131 + Lx LINE L1 6388 6651 -3 5 1522 585 302 53 42 chrX 122851189 122851452 -43798844 + Lx7 LINE L1 6788 7053 -643 5 1522 228 336 127 0 chrX 122851463 122851573 -43798723 - PB1 SINE Alu 0 127 4 5 1522 35 0 0 0 chrX 122851659 122851694 -43798602 + AT_rich Low_complexity Low_complexity 1 35 0 5 1522 203 179 0 0 chrX 122852775 122852814 -43797482 + T-rich Low_complexity Low_complexity 1 39 0 5 1522 3488 40 0 2 chrX 122852830 122853256 -43797040 - L1Md_F2 LINE L1 -11 6571 6147 5 1522 2178 137 5 30 chrX 122853256 122853661 -43796635 - Lx LINE L1 -29 6625 6231 5 1522 650 35 12 0 chrX 122854114 122854199 -43796097 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 5 1522 507 60 36 0 chrX 122854228 122854312 -43795984 + (TAGA)n Simple_repeat Simple_repeat 3 89 0 5 1522 930 50 0 0 chrX 122854326 122854447 -43795849 + Lx2 LINE L1 5716 5836 -1161 5 1522 1141 225 91 23 chrX 122854448 122854790 -43795506 - RMER6C LTR ERVK -2 688 324 5 1522 3665 91 2 0 chrX 122854809 122855304 -43794992 - L1_Mus1 LINE L1 -2 6565 6070 5 1522 17397 108 7 16 chrX 122855304 122859311 -43790985 - L1VL1 LINE L1 -1682 4201 236 5 1522 7326 65 19 0 chrX 122859534 122861081 -43789215 - L1Md_F3 LINE L1 -13 6571 4985 5 1522 2237 140 5 35 chrX 122861090 122861119 -43789177 - Lx LINE L1 -2 6652 6626 5 1522 3832 18 0 0 chrX 122861119 122861556 -43788740 - L1Md_A LINE L1 0 6582 6146 5 1522 2237 140 5 35 chrX 122861556 122861961 -43788335 - Lx LINE L1 -29 6625 6231 5 1522 650 35 12 0 chrX 122862414 122862499 -43787797 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 5 1522 507 60 36 0 chrX 122862528 122862612 -43787684 + (TAGA)n Simple_repeat Simple_repeat 3 89 0 5 1522 930 50 0 0 chrX 122862626 122862747 -43787549 + Lx2 LINE L1 5716 5836 -1161 5 1522 1157 234 91 18 chrX 122862748 122863088 -43787208 - RMER6D LTR ERVK -2 688 324 5 1522 3665 91 2 0 chrX 122863107 122863602 -43786694 - L1_Mus1 LINE L1 -2 6565 6070 5 1522 17397 109 7 16 chrX 122863602 122867609 -43782687 - L1VL1 LINE L1 -1682 4201 236 5 1522 207 0 0 0 chrX 122867626 122867649 -43782647 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1522 7328 71 19 1 chrX 122867837 122869417 -43780879 - L1Md_F3 LINE L1 -13 6571 4975 5 1522 8652 1 0 0 chrX 122869422 122870578 -43779718 - L1Md_A LINE L1 0 6582 5427 5 1522 10907 7 0 0 chrX 122870576 122871879 -43778417 + L1_Mm LINE L1 2488 3790 -2093 5 1522 27755 86 19 25 chrX 122871876 122876720 -43773576 - L1Md_A LINE L1 -883 5000 193 5 1522 1698 186 46 3 chrX 122876724 122877053 -43773243 - RMER6D LTR ERVK -374 346 4 5 1522 297 197 13 0 chrX 122877056 122877132 -43773164 - RMER6-int LTR ERVK 0 3177 3101 5 1522 1353 217 4 0 chrX 122877132 122877385 -43772911 - RMER6D LTR ERVK -1 719 466 5 1522 2148 190 29 21 chrX 122877387 122877807 -43772489 - RLTR20B2 LTR ERVK -137 423 1 5 1522 497 217 85 6 chrX 122877807 122877983 -43772313 - MYSERV16_I-int LTR ERVK 0 2326 2137 5 1522 1333 139 93 16 chrX 122877984 122878232 -43772064 + RLTR31_Mm LTR ERVK 1 267 -294 5 1522 4703 162 58 9 chrX 122878232 122879237 -43771059 - MYSERV16_I-int LTR ERVK -203 2123 1070 5 1522 3143 200 104 39 chrX 122879245 122880120 -43770176 - MYSERV16_I-int LTR ERVK -1394 932 1 5 1522 11044 12 0 0 chrX 122880465 122882467 -43767829 - L1Md_A LINE L1 -1 6581 4579 5 1522 6965 23 2 25 chrX 122882468 122883953 -43766343 - L1Md_A LINE L1 -3796 2087 644 5 1522 324 111 27 14 chrX 122884430 122884503 -43765793 + (TA)n Simple_repeat Simple_repeat 2 75 0 5 1522 6359 154 10 1 chrX 122884536 122886469 -43763827 - Lx LINE L1 -7 6647 4697 5 1522 2378 183 67 0 chrX 122886480 122886901 -43763395 - RLTR17 LTR ERVK -19 673 225 5 1522 2512 160 138 12 chrX 122887337 122887432 -43762864 - RLTR20B2 LTR ERVK -1 559 465 5 1522 387 41 0 0 chrX 122887432 122887481 -43762815 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1522 270 0 0 0 chrX 122887482 122887512 -43762784 + (GA)n Simple_repeat Simple_repeat 1 30 0 5 1522 2512 160 138 12 chrX 122887512 122887908 -43762388 - RLTR20B2 LTR ERVK -96 464 4 5 1522 584 262 0 21 chrX 122887933 122888077 -43762219 - RMER6C LTR ERVK -368 352 212 5 1522 2637 88 158 0 chrX 122888079 122888489 -43761807 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1522 291 130 0 0 chrX 122888491 122888545 -43761751 + IAPEz-int LTR ERVK 3 56 -1931 5 1522 428 89 119 109 chrX 122888548 122888649 -43761647 + IAPEz-int LTR ERVK 22 123 -6358 5 1522 236 238 0 0 chrX 122888649 122888691 -43761605 + RLTR27 LTR ERVK 231 272 -37 5 1522 3280 71 1 16 chrX 122888691 122889272 -43761024 + IAPEz-int LTR ERVK 165 662 -5819 5 1522 2037 90 0 0 chrX 122889272 122889550 -43760746 + IAPEz-int LTR ERVK 1359 1636 -4845 5 1522 5719 52 4 3 chrX 122889549 122890294 -43760002 + IAPEz-int LTR ERVK 5736 6481 0 5 1522 2540 87 182 0 chrX 122890294 122890696 -43759600 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1522 1006 204 20 15 chrX 122890702 122890906 -43759390 - RMER6C LTR ERVK -485 205 1 5 1522 1446 167 38 51 chrX 122890911 122891227 -43759069 - RMER6-int LTR ERVK -6 3171 2860 5 1522 228 211 19 19 chrX 122891239 122891292 -43759004 - LSU-rRNA_Hsa rRNA rRNA -3192 1843 1791 5 1522 2775 207 16 16 chrX 122891301 122891933 -43758363 - RMER6-int LTR ERVK -2545 632 1 5 1522 2477 181 200 2 chrX 122891933 122892208 -43758088 - RMER6C LTR ERVK 0 690 338 5 1522 627 14 0 0 chrX 122892208 122892280 -43758016 + (TC)n Simple_repeat Simple_repeat 2 73 0 5 1522 2477 181 200 2 chrX 122892280 122892580 -43757716 - RMER6C LTR ERVK -353 337 2 5 1522 314 260 62 10 chrX 122892645 122892742 -43757554 - MT2A LTR ERVL -401 132 31 5 1522 22 0 0 0 chrX 122892974 122892996 -43757300 + AT_rich Low_complexity Low_complexity 1 22 0 5 1522 2189 256 102 73 chrX 122893240 122894229 -43756067 - RMER17B LTR ERVK -57 901 1 5 1522 601 212 68 34 chrX 122894244 122894420 -43755876 + Lx2B LINE L1 6808 6989 -11 5 1522 222 172 30 30 chrX 122894888 122894954 -43755342 + T-rich Low_complexity Low_complexity 1 66 0 5 1522 624 259 78 27 chrX 122895584 122895996 -43754300 + L1_Mur1 LINE L1 516 831 -6151 5 1522 1844 196 64 0 chrX 122896002 122896425 -43753871 + L1_Mur1 LINE L1 677 1126 -5856 5 1522 918 251 3 96 chrX 122896438 122896782 -43753514 + L1_Mur1 LINE L1 6 317 -6667 5 1522 2254 146 21 23 chrX 122896816 122897244 -43753052 + L1_Mur1 LINE L1 660 1086 -5898 5 1522 6510 99 44 2 chrX 122897233 122898251 -43752045 - Lx3_Mus LINE L1 -213 6796 5736 5 1522 6685 236 131 13 chrX 122898241 122900200 -43750096 - L1_Mur2 LINE L1 -1749 4128 2056 5 1522 291 85 0 0 chrX 122900200 122900247 -43750049 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1522 6685 220 186 8 chrX 122900247 122901055 -43749241 - L1_Mur2 LINE L1 -3822 2055 986 5 1522 180 77 0 0 chrX 122901059 122901085 -43749211 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 5 1522 4523 160 35 30 chrX 122901796 122902771 -43747525 + L1_Mur1 LINE L1 3815 4794 -1083 5 1522 227 197 30 76 chrX 122903439 122903505 -43746791 - ORR1E LTR MaLR -293 66 4 5 1522 464 250 35 35 chrX 122905471 122905612 -43744684 + B1_Mur1 SINE Alu 1 141 -8 5 1522 1625 193 168 9 chrX 122905866 122906290 -43744006 + Lx4B LINE L1 6434 6924 -134 5 1522 2090 243 57 6 chrX 122907369 122907911 -43742385 + Lx5 LINE L1 6481 7050 0 5 1522 21 36 0 0 chrX 122908190 122908218 -43742078 + AT_rich Low_complexity Low_complexity 1 28 0 5 1522 272 350 21 0 chrX 122908558 122908655 -43741641 + B4A SINE B4 186 284 -8 5 1522 486 88 0 0 chrX 122908688 122908756 -43741540 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 1522 486 0 0 0 chrX 122908756 122908809 -43741487 + (GA)n Simple_repeat Simple_repeat 2 55 0 5 1522 278 282 105 15 chrX 122909062 122909195 -43741101 - Lx7 LINE L1 0 7696 7552 5 1522 265 188 25 0 chrX 122909195 122909275 -43741021 + GA-rich Low_complexity Low_complexity 3 84 0 5 1522 1102 107 11 0 chrX 122909275 122909452 -43740844 + (GAA)n Simple_repeat Simple_repeat 1 179 0 5 1522 918 273 0 0 chrX 122909690 122909895 -43740401 + MTD LTR MaLR 1 205 -214 5 1522 229 262 61 15 chrX 122909901 122909967 -43740329 + B3A SINE B2 3 71 -127 5 1522 873 280 13 23 chrX 122910080 122910306 -43739990 + MTD LTR MaLR 196 401 -18 5 1522 2528 112 50 24 chrX 122910607 122910670 -43739626 - L1_Mus3 LINE L1 -1 6637 6562 5 1522 246 32 0 0 chrX 122910670 122910701 -43739595 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1522 2528 112 50 24 chrX 122910701 122911059 -43739237 - L1_Mus3 LINE L1 -77 6561 6205 5 1522 218 269 0 0 chrX 122911219 122911272 -43739024 - PB1D9 SINE Alu -6 143 70 5 1522 4466 157 35 3 chrX 122912392 122913238 -43737058 + L1_Mm LINE L1 4924 5796 -87 5 1522 1036 296 23 23 chrX 122913242 122913684 -43736612 + L1VL4 LINE L1 193 634 -5668 5 1522 30102 85 3 5 chrX 122913690 122918847 -43731449 + L1Md_F2 LINE L1 350 5589 -297 5 1522 7882 53 6 0 chrX 122918847 122919837 -43730459 + L1Md_F2 LINE L1 5590 6585 0 5 1522 1047 97 28 0 chrX 122919857 122920001 -43730295 + B1_Mus1 SINE Alu 1 148 0 5 1522 1318 156 3 36 chrX 122920037 122920291 -43730005 + L1VL4 LINE L1 626 870 -5432 5 1522 324 0 0 0 chrX 122920291 122920327 -43729969 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 5 1522 1318 156 3 36 chrX 122920327 122920378 -43729918 + L1VL4 LINE L1 871 921 -5381 5 1522 3611 23 121 0 chrX 122920385 122920825 -43729471 - MT2_Mm LTR ERVL 0 493 1 5 1522 473 244 23 8 chrX 122920862 122920994 -43729302 + L1Md_F LINE L1 585 718 -5801 6 1522 338 57 0 19 chrX 122921012 122921066 -43729230 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 6 1522 16199 45 1 2 chrX 122921068 122923849 -43726447 - L1Md_F2 LINE L1 -1 6581 3806 6 1522 12457 160 25 56 chrX 122923903 122927158 -43723138 + L1Md_F LINE L1 675 3816 -2067 6 1522 29808 92 5 18 chrX 122927158 122932538 -43717758 + L1Md_F2 LINE L1 276 5586 -297 6 1522 7771 68 0 2 chrX 122932538 122933536 -43716760 + L1Md_F2 LINE L1 5587 6582 0 6 1522 1713 190 10 10 chrX 122933551 122933934 -43716362 + L1_Mur2 LINE L1 3806 4188 -1689 6 1522 37246 35 1 7 chrX 122933941 122940096 -43710200 - L1Md_T LINE L1 0 6582 468 6 1522 3651 169 11 1 chrX 122940232 122940942 -43709354 + L1_Mur2 LINE L1 4197 4913 -964 6 1522 2866 132 6 0 chrX 122940936 122941572 -43708724 + L1_Mus4 LINE L1 5356 5995 -641 6 1522 4228 151 4 20 chrX 122941566 122942716 -43707580 + L1Md_F2 LINE L1 217 1559 -4324 6 190 26015 86 2 3 chrX 122942713 122946527 -43703769 + L1Md_F2 LINE L1 1778 5585 -298 6 1523 7519 77 0 3 chrX 122946528 122947515 -43702781 + L1Md_F2 LINE L1 5587 6570 -12 6 1523 3269 162 71 17 chrX 122947529 122948181 -43702115 + Lx LINE L1 5960 6646 -8 6 1523 255 31 0 0 chrX 122948181 122948213 -43702083 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 6 1523 4734 158 28 9 chrX 122948213 122949057 -43701239 + Lx LINE L1 5791 6650 -4 6 1523 299 320 15 53 chrX 122949120 122949252 -43701044 - Lx9 LINE L1 -895 6749 6623 6 1523 298 212 0 0 chrX 122949253 122949319 -43700977 + Lx9 LINE L1 6970 7035 -609 6 1523 201 180 0 0 chrX 122949324 122949374 -43700922 + (TTG)n Simple_repeat Simple_repeat 2 51 0 6 1523 2565 246 123 18 chrX 122949920 122950706 -43699590 - Lx6 LINE L1 -180 7280 6412 6 1523 1727 165 57 91 chrX 122950726 122951133 -43699163 - RLTR9C LTR ERVK 0 393 1 6 1523 458 95 14 0 chrX 122951134 122951208 -43699088 - ETnERV2-int LTR ERVK -1 7405 7331 6 1523 2687 31 3 0 chrX 122951405 122951729 -43698567 + RLTR1C LTR ERV1 1 325 -178 6 1523 970 123 0 0 chrX 122951822 122951960 -43698336 - B1_Mus1 SINE Alu -9 139 2 6 1523 1183 319 14 23 chrX 122952197 122952624 -43697672 - Lx5 LINE L1 -1 7049 6627 6 1523 1179 221 65 22 chrX 122952608 122952919 -43697377 + L1_Mur3 LINE L1 4867 5192 -688 6 1523 240 35 0 0 chrX 122952919 122952948 -43697348 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 1523 1179 221 65 22 chrX 122952948 122952992 -43697304 + L1_Mur3 LINE L1 5193 5236 -644 6 1523 1218 173 0 0 chrX 122952983 122953203 -43697093 - Lx3C LINE L1 -1170 5806 5587 6 1523 1617 193 115 14 chrX 122953603 122953950 -43696346 + RMER20A LTR ERVK 1 382 -134 6 1523 7894 29 1 0 chrX 122953955 122955369 -43694927 - L1Md_A LINE L1 0 6582 5167 6 1523 3141 26 2 52 chrX 122955375 122955781 -43694515 - RLTR10 LTR ERVK -4 386 1 6 1523 10511 92 54 55 chrX 122955783 122957730 -43692566 - IAPEz-int LTR ERVK -3 1984 41 6 1523 3179 31 3 10 chrX 122957746 122958135 -43692161 - RLTR10 LTR ERVK -4 386 1 6 1523 8035 51 10 18 chrX 122958144 122959230 -43691066 - IAPEz-int LTR ERVK -2 6479 5403 6 1523 12347 62 103 18 chrX 122959211 122961664 -43688632 - IAPEz-int LTR ERVK -3811 2670 8 6 1523 2154 105 11 46 chrX 122961664 122962013 -43688283 - RLTR10 LTR ERVK 0 337 1 6 1523 2042 42 0 0 chrX 122962013 122962277 -43688019 - L1Md_A LINE L1 -711 5172 4909 6 1523 390 258 97 139 chrX 122962286 122962388 -43687908 + RMER20A LTR ERVK 373 480 -36 6 1523 4338 162 50 33 chrX 122962388 122963276 -43687020 + RMER17A2 LTR ERVK 1 903 -3 6 1523 390 258 97 139 chrX 122963276 122963317 -43686979 + RMER20A LTR ERVK 481 510 -6 6 1523 186 43 0 0 chrX 122963434 122963457 -43686839 + (TC)n Simple_repeat Simple_repeat 1 23 0 6 1523 297 0 0 0 chrX 122963742 122963775 -43686521 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 6 1523 720 286 38 44 chrX 122963894 122964187 -43686109 + Lx5 LINE L1 6757 7047 -3 6 1523 24 32 0 0 chrX 122964270 122964301 -43685995 + AT_rich Low_complexity Low_complexity 1 31 0 6 1523 736 310 65 72 chrX 122964590 122965204 -43685092 + L1_Mur3 LINE L1 1528 2108 -3772 6 1523 444 82 0 0 chrX 122965204 122965265 -43685031 + (TA)n Simple_repeat Simple_repeat 2 62 0 6 1523 736 310 65 72 chrX 122965265 122965679 -43684617 + L1_Mur3 LINE L1 2109 2549 -3331 6 1523 980 237 51 21 chrX 122965679 122965916 -43684380 + MTB_Mm LTR MaLR 1 244 -163 6 1523 430 130 19 107 chrX 122965902 122965954 -43684342 + RMER19B LTR ERVK 809 856 -46 6 1523 3098 199 158 61 chrX 122965954 122966776 -43683520 + RMER19B LTR ERVK 1 902 0 6 1523 430 130 19 107 chrX 122966776 122966826 -43683470 + RMER19B LTR ERVK 857 902 0 6 1523 317 264 0 0 chrX 122966831 122966903 -43683393 - MTC-int LTR MaLR -496 762 691 6 1523 1575 146 27 61 chrX 122966950 122967279 -43683017 - MurERV4_19-int LTR ERVK -582 5198 4881 6 1523 271 350 7 62 chrX 122967319 122967465 -43682831 + RMER4A LTR ERVK 287 424 -42 6 1523 3367 233 37 56 chrX 122967465 122968745 -43681551 + MYSERV16_I-int LTR ERVK 1070 2324 -2 6 1523 1356 227 20 3 chrX 122968746 122969099 -43681197 + RLTR15 LTR ERVK 1 359 0 6 1523 779 216 294 74 chrX 122969099 122969160 -43681136 + MTB_Mm-int LTR MaLR 763 823 -435 6 1523 189 0 0 0 chrX 122969160 122969181 -43681115 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1523 779 216 294 74 chrX 122969181 122969524 -43680772 + MTB_Mm-int LTR MaLR 824 1255 -3 6 1523 1752 221 46 5 chrX 122969543 122969916 -43680380 + MTB_Mm LTR MaLR 20 407 0 6 1523 529 256 21 19 chrX 122969927 122970180 -43680116 + L1_Mur3 LINE L1 3439 3713 -2427 6 1523 2967 270 67 28 chrX 122970600 122971644 -43678652 + L1_Mur3 LINE L1 3683 4749 -1131 6 1523 243 0 0 0 chrX 122971644 122971671 -43678625 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1523 2967 270 67 28 chrX 122971671 122972076 -43678220 + L1_Mur3 LINE L1 4750 5187 -693 6 1523 1985 192 104 15 chrX 122972119 122972691 -43677605 - L1Md_F LINE L1 -5563 956 407 6 1523 36 70 0 0 chrX 122972742 122972813 -43677483 + AT_rich Low_complexity Low_complexity 1 71 0 6 1523 3032 259 120 34 chrX 122972831 122974012 -43676284 - Lx5 LINE L1 -48 7002 5720 6 1523 253 309 47 23 chrX 122974019 122974105 -43676191 - PB1D10 SINE Alu -21 96 9 6 1523 37 0 0 0 chrX 122974184 122974221 -43676075 + AT_rich Low_complexity Low_complexity 1 37 0 6 1523 3069 193 50 19 chrX 122975104 122975727 -43674569 - RLTR26 LTR ERVK 0 642 1 6 1523 5631 152 15 7 chrX 122976046 122976997 -43673299 - RMER17B LTR ERVK 0 958 1 6 1523 281 26 26 0 chrX 122978794 122978832 -43671464 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1523 620 335 42 18 chrX 122978861 122979270 -43671026 - Lx9 LINE L1 -216 7428 6879 6 1523 195 129 0 0 chrX 122979292 122979323 -43670973 + (CTTG)n Simple_repeat Simple_repeat 1 31 0 6 1523 216 383 21 0 chrX 122979469 122979563 -43670733 - B3 SINE B2 -46 170 75 6 1523 2627 172 13 5 chrX 122979564 122980191 -43670105 + L1_Mur1 LINE L1 799 1434 -4452 6 1523 2116 53 4 0 chrX 122980191 122980455 -43669841 + L1Md_F2 LINE L1 6314 6578 -4 6 1523 2090 186 36 27 chrX 122980455 122980753 -43669543 + L1_Mur1 LINE L1 1435 1733 -4153 6 1523 1813 176 3 59 chrX 122980757 122981095 -43669201 + ORR1A2 LTR MaLR 1 319 -8 6 1523 1929 205 21 2 chrX 122981101 122981581 -43668715 + L1_Mur1 LINE L1 1735 2223 -3663 6 1523 243 224 30 0 chrX 122981582 122981649 -43668647 + (CAATA)n Simple_repeat Simple_repeat 5 73 0 6 1523 36089 42 4 13 chrX 122981671 122988087 -43662209 - L1Md_T LINE L1 0 6582 232 6 1523 1021 187 23 0 chrX 122988088 122988307 -43661989 + MusHAL1 LINE L1 1450 1673 -1039 6 1523 909 154 0 0 chrX 122988307 122988463 -43661833 - Lx2 LINE L1 -1114 5883 5728 6 1523 1485 229 20 20 chrX 122988461 122988857 -43661439 + Lx LINE L1 6233 6628 -26 6 1523 1485 158 3 0 chrX 122988867 122989158 -43661138 + L1_Mur1 LINE L1 2917 3208 -2678 6 1523 5889 97 22 8 chrX 122989158 122990027 -43660269 + RLTR13D5 LTR ERVK 1 793 -230 6 1523 211 296 9 75 chrX 122990177 122990283 -43660013 + MIR SINE MIR 151 249 -13 6 1523 702 0 0 0 chrX 122990376 122990454 -43659842 + (TTC)n Simple_repeat Simple_repeat 1 78 0 6 1523 410 0 20 0 chrX 122990455 122990505 -43659791 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 6 1523 189 0 0 0 chrX 122991184 122991205 -43659091 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1523 1111 84 0 0 chrX 122991207 122991349 -43658947 - B1_Mm SINE Alu -5 142 1 6 1523 244 316 48 71 chrX 122991703 122991829 -43658467 + MER5A DNA MER1_type 35 157 -32 6 1523 216 0 0 0 chrX 122992376 122992400 -43657896 + (TA)n Simple_repeat Simple_repeat 2 25 0 6 1523 26 30 0 0 chrX 122993093 122993126 -43657170 + AT_rich Low_complexity Low_complexity 1 33 0 6 1523 430 252 84 27 chrX 122993394 122993541 -43656755 - ORR1D1 LTR MaLR -2 382 200 6 1523 634 243 7 0 chrX 122993541 122993685 -43656611 - B1_Mus2 SINE Alu -1 146 2 6 1523 396 0 0 0 chrX 122993716 122993760 -43656536 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 6 1523 5086 152 11 5 chrX 122993761 122994629 -43655667 - Lx3_Mus LINE L1 -23 6986 6113 6 1523 364 274 8 34 chrX 122994629 122994746 -43655550 - ORR1D1 LTR MaLR -270 114 1 6 1523 312 27 0 0 chrX 122994850 122994887 -43655409 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 1523 2567 288 75 40 chrX 122994948 122996268 -43654028 + Lx9 LINE L1 5885 7357 -287 6 1523 552 15 0 0 chrX 122996340 122996405 -43653891 + (CA)n Simple_repeat Simple_repeat 1 65 0 6 1523 851 135 88 0 chrX 122996433 122996581 -43653715 + B2_Mm2 SINE B2 28 188 -7 6 1523 2032 253 79 14 chrX 122996676 122997410 -43652886 + L1_Mur3 LINE L1 548 1329 -6399 6 1523 1537 183 20 7 chrX 122997439 122997736 -43652560 - RLTR15 LTR ERVK -56 303 3 6 1523 504 115 67 9 chrX 122997740 122997845 -43652451 + L1_Mur3 LINE L1 1326 1436 -4444 6 1523 873 231 7 32 chrX 122997877 122998159 -43652137 + L1_Mur3 LINE L1 1428 1702 -4178 6 1523 1221 259 40 23 chrX 122998203 122998630 -43651666 + L1_Mur3 LINE L1 2369 2802 -3078 6 1523 2980 162 26 11 chrX 122998633 122999201 -43651095 - Lx4A LINE L1 -813 6245 5669 6 1523 4169 183 10 16 chrX 122999199 122999993 -43650303 + Lx4A LINE L1 6190 6978 -80 6 1523 286 195 39 0 chrX 123000074 123000151 -43650145 + L1_Mur3 LINE L1 2776 2855 -3025 1 1523 1684 194 95 20 chrX 123000146 123000587 -43649709 + L1_Mur3 LINE L1 3298 3771 -2109 1 1523 1159 309 53 15 chrX 123001902 123002297 -43647999 - MTD LTR MaLR -9 410 1 2 1523 352 216 12 24 chrX 123002297 123002404 -43647892 - MTD-int LTR MaLR 0 1258 1169 2 1523 186 43 0 0 chrX 123002511 123002534 -43647762 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 3 1523 448 250 105 21 chrX 123002603 123002746 -43647550 - MTD LTR MaLR 0 421 267 2 1523 297 0 0 0 chrX 123002990 123003023 -43647273 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 4 1523 8948 111 13 4 chrX 123003023 123005108 -43645188 + L1_Mus2 LINE L1 4460 6564 -2 5 1523 786 355 55 30 chrX 123005548 123006228 -43644068 - Lx7 LINE L1 -3 7470 6763 6 1523 1030 253 80 21 chrX 123006479 123006867 -43643429 - Lx9 LINE L1 -22 7622 7212 7 1523 14568 80 11 3 chrX 123006880 123009243 -43641053 - L1Md_F2 LINE L1 0 6582 4209 8 1523 255 61 0 0 chrX 123009243 123009276 -43641020 + (CA)n Simple_repeat Simple_repeat 1 33 0 9 1523 14568 78 7 2 chrX 123009276 123009573 -43640723 - L1Md_F2 LINE L1 -1675 4208 3900 8 1523 41139 7 0 1 chrX 123009628 123016606 -43633690 - L1Md_A LINE L1 0 6582 1 1 1523 17455 107 12 31 chrX 123016608 123020209 -43630087 - L1Md_F2 LINE L1 -1972 3911 380 8 1523 3735 89 8 0 chrX 123020217 123020723 -43629573 - L1_Mus1 LINE L1 -9 6558 6049 1 1523 961 286 18 4 chrX 123020723 123021000 -43629296 - Lx9 LINE L1 -427 7217 6937 7 1523 450 317 140 36 chrX 123021101 123021768 -43628528 - L1MA4A LINE L1 -396 5907 5104 1 1523 330 167 0 0 chrX 123021771 123021831 -43628465 + CT-rich Low_complexity Low_complexity 2 61 0 1 1523 531 86 0 0 chrX 123021835 123021905 -43628391 + Lx2A1 LINE L1 6468 6537 -471 1 1523 432 0 0 0 chrX 123021921 123021969 -43628327 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 1523 732 178 38 2 chrX 123022453 123022604 -43627692 + B2_Mm2 SINE B2 48 211 -5 1 1523 2517 65 65 0 chrX 123023218 123023543 -43626753 - ORR1A1 LTR MaLR 0 346 1 1 1523 11913 167 30 25 chrX 123025143 123026978 -43623318 + L1_Mus3 LINE L1 3707 7263 -381 1 1523 930 118 21 0 chrX 123026978 123027122 -43623174 + B1_Mus2 SINE Alu 1 147 0 1 1523 11913 119 16 17 chrX 123027122 123028385 -43621911 + L1_Mus3 LINE L1 5359 6636 -2 1 1523 763 238 33 40 chrX 123028590 123028816 -43621480 + Lx3B LINE L1 6751 6989 -11 2 1523 22 0 0 0 chrX 123029043 123029065 -43621231 + AT_rich Low_complexity Low_complexity 1 22 0 2 1523 211 242 0 16 chrX 123029142 123029205 -43621091 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 1523 234 0 0 0 chrX 123029744 123029770 -43620526 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 2 1523 254 194 32 0 chrX 123029904 123029966 -43620330 + GA-rich Low_complexity Low_complexity 2 65 0 2 1523 423 98 0 0 chrX 123030103 123030164 -43620132 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 1523 808 263 64 64 chrX 123030412 123030505 -43619791 - MTD LTR MaLR -139 280 199 2 1523 3320 28 5 8 chrX 123030505 123030902 -43619394 - MTA_Mm LTR MaLR 0 396 1 2 1523 808 263 64 64 chrX 123030902 123031088 -43619208 - MTD LTR MaLR -221 198 1 2 1523 361 350 86 5 chrX 123031100 123031298 -43618998 - L1M2 LINE L1 -2131 4012 3799 2 1523 21 0 0 0 chrX 123031652 123031673 -43618623 + AT_rich Low_complexity Low_complexity 1 21 0 2 1523 403 357 82 20 chrX 123031709 123031855 -43618441 - RSINE1 SINE B4 -9 156 2 3 1523 317 301 113 9 chrX 123031855 123032200 -43618096 - L1M2 LINE L1 -2691 3449 3069 2 1523 39 60 0 0 chrX 123032214 123032281 -43618015 + AT_rich Low_complexity Low_complexity 1 67 0 3 1523 510 324 127 12 chrX 123032598 123032750 -43617546 - ORR1D2 LTR MaLR -1 369 198 3 1523 5500 88 12 7 chrX 123032750 123033524 -43616772 + L1_Mus4 LINE L1 5853 6630 -6 3 1523 510 324 127 12 chrX 123033524 123033693 -43616603 - ORR1D2 LTR MaLR -173 197 13 3 1523 2121 156 125 2 chrX 123033693 123034118 -43616178 + Lx2 LINE L1 5190 5666 -211 3 1523 818 153 144 0 chrX 123034129 123034331 -43615965 + Lx2 LINE L1 5932 6163 -834 3 1523 1189 163 95 0 chrX 123034337 123034558 -43615738 + L1_Mm LINE L1 5272 5513 -370 3 1523 4563 175 5 20 chrX 123034561 123035396 -43614900 + Lx2 LINE L1 6173 6994 -3 3 1523 762 191 35 0 chrX 123035452 123035625 -43614671 - L1_Mur2 LINE L1 -1429 4448 4270 3 1523 1724 301 58 7 chrX 123035634 123036172 -43614124 - Lx5 LINE L1 -8 7042 6478 3 1523 6423 210 17 91 chrX 123036176 123037903 -43612393 - L1_Mur2 LINE L1 -13 5864 4281 3 1523 196 30 29 29 chrX 123037903 123037937 -43612359 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 3 1523 6423 210 17 91 chrX 123037937 123038050 -43612246 - L1_Mur2 LINE L1 -1597 4280 4161 3 1523 510 260 112 0 chrX 123038321 123038463 -43611833 - Lx7 LINE L1 -709 6764 6598 4 1523 28 0 0 0 chrX 123038590 123038618 -43611678 + AT_rich Low_complexity Low_complexity 1 28 0 4 1523 225 338 37 12 chrX 123038908 123038989 -43611307 - ORR1E LTR MaLR -258 101 19 4 1523 1717 139 4 0 chrX 123038989 123039263 -43611033 - L1_Mm LINE L1 -1004 4879 4605 4 1523 3917 154 26 98 chrX 123039263 123040189 -43610107 - RLTR13D6 LTR ERVK -33 869 30 4 1523 10519 130 18 1 chrX 123040189 123041912 -43608384 - L1_Mm LINE L1 -1294 4589 2838 4 1523 2584 142 20 9 chrX 123041912 123042351 -43607945 + L1_Mus3 LINE L1 6191 6634 -4 4 1523 1303 296 13 50 chrX 123042390 123042855 -43607441 - RLTR1 LTR ERV1 -4 620 173 4 1523 6517 39 0 0 chrX 123042942 123043719 -43606577 + L1Md_T LINE L1 5806 6582 0 4 1523 2745 209 0 4 chrX 123044289 123044823 -43605473 - Lx LINE L1 -5 6649 6118 4 1523 2314 128 19 11 chrX 123044823 123045186 -43605110 + RLTR9D LTR ERVK 2 367 -36 5 1523 1675 130 109 0 chrX 123045209 123045370 -43604926 - Lx LINE L1 -518 6136 5954 4 1523 220 27 0 51 chrX 123045370 123045409 -43604887 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 5 1523 1675 130 109 0 chrX 123045409 123045532 -43604764 - Lx LINE L1 -701 5953 5822 4 1523 544 250 90 12 chrX 123046139 123046305 -43603991 - MTE-int LTR MaLR -34 1546 1368 5 1523 1421 370 77 3 chrX 123046304 123046927 -43603369 - MTE-int LTR MaLR -317 1263 595 5 1523 394 307 8 16 chrX 123047143 123047272 -43603024 - MTE-int LTR MaLR -1112 468 341 5 1523 488 228 228 56 chrX 123047317 123047549 -43602747 - RLTR10A LTR ERVK 0 411 140 5 1523 1684 213 17 29 chrX 123047590 123048076 -43602220 - IAP-d-int LTR ERVK -202 7042 6590 5 1523 2094 316 46 43 chrX 123048140 123049983 -43600313 - IAP-d-int LTR ERVK -2107 5474 3339 5 1523 1723 278 42 32 chrX 123050028 123050749 -43599547 - IAP-d-int LTR ERVK -3574 2968 2241 5 1523 621 269 35 30 chrX 123050969 123051168 -43599128 - RLTR10-int LTR ERVK -1559 428 229 5 1523 242 197 48 32 chrX 123051188 123051251 -43599045 - RLTR10A LTR ERVK -213 198 135 5 1523 1754 145 14 64 chrX 123051323 123051683 -43598613 + L1_Mus4 LINE L1 6295 6636 0 5 1523 21 57 0 0 chrX 123051754 123051789 -43598507 + AT_rich Low_complexity Low_complexity 1 35 0 5 1523 6442 137 21 42 chrX 123052231 123052356 -43597940 - Lx LINE L1 -7 6647 6560 5 1523 4039 62 2 4 chrX 123052356 123052860 -43597436 - RLTR1C LTR ERV1 0 503 1 5 1523 6442 152 39 30 chrX 123052860 123054207 -43596089 - Lx LINE L1 -95 6559 5148 5 1523 13348 161 36 26 chrX 123054212 123057344 -43592952 - Lx LINE L1 -1462 4421 1265 5 1523 324 0 0 0 chrX 123057344 123057380 -43592916 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 5 1523 685 264 105 61 chrX 123057381 123057724 -43592572 + RLTR10D LTR ERVK 2 359 0 6 1523 5095 120 50 21 chrX 123057726 123058570 -43591726 - L1VL2 LINE L1 -5382 1036 179 6 1523 420 334 98 43 chrX 123058572 123058744 -43591552 - MTEa-int LTR MaLR -1214 366 203 6 1523 477 0 0 0 chrX 123058744 123058797 -43591499 + (TC)n Simple_repeat Simple_repeat 2 54 0 6 1523 207 0 0 0 chrX 123058797 123058819 -43591477 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1523 420 334 98 43 chrX 123058819 123058992 -43591304 - MTEa-int LTR MaLR -1378 202 2 6 1523 463 335 0 23 chrX 123058994 123059168 -43591128 - MTEa LTR MaLR -2 377 208 6 1523 238 344 121 8 chrX 123059886 123060018 -43590278 + MLT2B4 LTR ERVL 79 225 -331 6 1523 387 292 0 0 chrX 123060127 123060240 -43590056 + Lx7 LINE L1 7554 7666 -30 6 1523 286 149 52 7 chrX 123060254 123060389 -43589907 + (TA)n Simple_repeat Simple_repeat 2 142 0 6 1523 687 216 65 0 chrX 123062097 123062236 -43588060 - B1_Mus1 SINE Alu 0 148 1 6 1523 351 0 0 0 chrX 123062595 123062634 -43587662 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1523 5854 74 2 3 chrX 123062830 123063643 -43586653 + L1Md_F2 LINE L1 5543 6354 -228 7 1523 650 78 0 10 chrX 123063643 123063796 -43586500 + L1Md_F2 LINE L1 6462 6582 0 7 1523 1574 253 127 6 chrX 123063977 123064514 -43585782 + Lx9 LINE L1 7036 7637 -7 7 1523 220 329 26 26 chrX 123064540 123064618 -43585678 - PB1D10 SINE Alu -33 84 7 7 1523 520 378 47 9 chrX 123065417 123065628 -43584668 + B4A SINE B4 3 221 -71 7 1523 779 48 0 9 chrX 123065630 123065735 -43584561 + (GGGAA)n Simple_repeat Simple_repeat 2 105 0 7 1523 207 171 0 47 chrX 123065738 123065781 -43584515 + GA-rich Low_complexity Low_complexity 5 45 0 7 1523 499 119 133 38 chrX 123065798 123065886 -43584410 + B1_Mus1 SINE Alu 34 135 -13 7 1523 684 0 0 0 chrX 123065886 123065962 -43584334 + (CAAAA)n Simple_repeat Simple_repeat 1 76 0 7 1523 499 119 133 38 chrX 123065962 123065978 -43584318 + B1_Mus1 SINE Alu 136 148 0 7 1523 4036 130 24 27 chrX 123066001 123066663 -43583633 + Lx3A LINE L1 6312 6971 -10 7 1523 243 61 0 0 chrX 123066800 123066833 -43583463 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 7 1523 1293 145 5 5 chrX 123066869 123067091 -43583205 - Lx2 LINE L1 -1 6996 6775 8 1523 2587 142 7 19 chrX 123067101 123067526 -43582770 - Lx2 LINE L1 -355 6642 6223 8 1523 25 65 0 0 chrX 123068964 123069010 -43581286 + AT_rich Low_complexity Low_complexity 1 46 0 8 1523 733 181 19 6 chrX 123069032 123069193 -43581103 - L1_Mur2 LINE L1 -518 5359 5197 8 1523 1929 210 18 16 chrX 123069193 123069633 -43580663 + Lx LINE L1 6207 6647 -7 8 1523 7446 67 20 0 chrX 123069832 123070792 -43579504 + L1_Mus1 LINE L1 5587 6565 -2 8 1523 251 300 24 53 chrX 123071124 123071293 -43579003 - L1M3 LINE L1 -639 5550 5387 8 1523 267 364 53 43 chrX 123071388 123071784 -43578512 + L1MA6 LINE L1 5760 6159 -141 8 1523 483 209 0 0 chrX 123071832 123071937 -43578359 + (TA)n Simple_repeat Simple_repeat 1 105 0 8 1523 289 255 101 10 chrX 123071986 123072085 -43578211 + PB1D10 SINE Alu 2 109 -8 8 1523 1155 215 0 9 chrX 123072176 123072392 -43577904 + URR1B DNA MER1_type 12 225 0 8 1523 340 328 27 81 chrX 123074180 123074366 -43575930 - MIR SINE MIR -47 215 40 9 1523 283 294 4 4 chrX 123074671 123074790 -43575506 - ID4_ SINE ID -27 125 7 9 1523 263 26 51 0 chrX 123075276 123075315 -43574981 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 9 190 6971 186 33 17 chrX 123075399 123076777 -43573519 - Lx2 LINE L1 -11 6986 5588 9 1524 2665 218 22 3 chrX 123076775 123077377 -43572919 + Lx2 LINE L1 4983 5595 -291 9 1524 381 176 0 0 chrX 123078015 123078089 -43572207 + (TA)n Simple_repeat Simple_repeat 1 74 0 9 1524 21 36 0 0 chrX 123079582 123079610 -43570686 + AT_rich Low_complexity Low_complexity 1 28 0 9 1524 395 338 124 51 chrX 123079617 123079776 -43570520 - B4A SINE B4 -18 274 91 9 1524 329 63 0 45 chrX 123079776 123079842 -43570454 - L1_Mus3 LINE L1 -1 6637 6575 9 1524 395 338 124 51 chrX 123079842 123079916 -43570380 - B4A SINE B4 -202 90 24 9 1524 2766 39 3 3 chrX 123079916 123080253 -43570043 - IAPLTR1a_Mm LTR ERVK 0 337 1 9 1524 9315 25 2 6 chrX 123080253 123081336 -43568960 - IAPEz-int LTR ERVK 0 6481 5403 9 1524 20871 39 36 15 chrX 123081314 123083925 -43566371 - IAPEz-int LTR ERVK -3807 2674 8 9 1524 2766 39 3 3 chrX 123083925 123084262 -43566034 - IAPLTR1a_Mm LTR ERVK 0 337 1 9 1524 209 273 0 0 chrX 123084789 123084844 -43565452 + A-rich Low_complexity Low_complexity 5 59 0 9 1524 23 33 0 0 chrX 123085681 123085711 -43564585 + AT_rich Low_complexity Low_complexity 1 30 0 1 1524 229 196 0 0 chrX 123085716 123085762 -43564534 + L1_Mur1 LINE L1 3 48 -6936 1 1524 7761 133 29 29 chrX 123085764 123087912 -43562384 + L1_Mur1 LINE L1 317 2471 -3415 1 1524 594 129 69 0 chrX 123087952 123088053 -43562243 + B2_Mm1t SINE B2 72 179 -14 1 1524 272 126 342 35 chrX 123088120 123088234 -43562062 + B2_Mm2 SINE B2 47 195 0 1 1524 4620 130 8 44 chrX 123088235 123089082 -43561214 + L1_Mur1 LINE L1 2466 3282 -2604 1 1524 8386 128 3 14 chrX 123089071 123090426 -43559870 + L1_Mur1 LINE L1 4410 5749 -137 1 1524 3932 143 74 11 chrX 123090426 123091187 -43559109 + RMER17D2 LTR ERVK 1 809 0 1 1524 7230 137 14 16 chrX 123091187 123092376 -43557920 + Lx3A LINE L1 5741 6927 -54 1 1524 180 77 0 0 chrX 123092378 123092404 -43557892 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1524 32 106 0 0 chrX 123092411 123092534 -43557762 + AT_rich Low_complexity Low_complexity 1 123 0 1 1524 249 33 0 0 chrX 123092741 123092771 -43557525 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1524 41031 8 0 0 chrX 123092941 123099510 -43550786 - L1Md_A LINE L1 0 6582 15 1 1524 234 0 0 0 chrX 123100261 123100287 -43550009 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1524 915 219 106 8 chrX 123100588 123100837 -43549459 - RMER1B Other Other -16 1050 791 1 1524 33045 99 9 3 chrX 123101369 123107535 -43542761 - L1Md_F2 LINE L1 -2 6580 420 1 1524 207 0 0 0 chrX 123107705 123107728 -43542568 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1524 290 303 16 0 chrX 123108039 123108161 -43542135 - Lx6 LINE L1 -22 7438 7315 1 1524 2519 114 31 24 chrX 123108166 123108587 -43541709 - Lx3_Mus LINE L1 -340 5546 5123 1 1524 8073 114 52 19 chrX 123108585 123109977 -43540319 + Lx3_Mus LINE L1 5552 6988 -21 1 1524 180 0 0 0 chrX 123109977 123109997 -43540299 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1 1524 1909 298 78 30 chrX 123109997 123110805 -43539491 - Lx6 LINE L1 -134 7326 6263 1 1524 1633 221 111 35 chrX 123110855 123111315 -43538981 - Lx6 LINE L1 -1371 6089 5595 1 1524 27136 126 24 7 chrX 123111329 123117242 -43533054 - L1_Mus3 LINE L1 -6 6632 618 1 1524 4184 177 82 11 chrX 123117272 123117541 -43532755 - L1_Mm LINE L1 -882 5001 4664 1 1524 385 84 14 14 chrX 123117541 123117613 -43532683 + (TTG)n Simple_repeat Simple_repeat 1 72 0 1 1524 4184 177 82 11 chrX 123117613 123118297 -43531999 - L1_Mm LINE L1 -1220 4663 3982 1 1524 5699 170 19 15 chrX 123118299 123119298 -43530998 + Lx LINE L1 5129 6126 -528 1 1524 907 85 131 0 chrX 123119298 123119428 -43530868 - B1_Mus2 SINE Alu 0 147 1 1 1524 5699 152 19 24 chrX 123119428 123119944 -43530352 + Lx LINE L1 6127 6647 -7 1 1524 3118 276 30 13 chrX 123119949 123120808 -43529488 + ORR1D1-int LTR MaLR 491 1364 -6 1 1524 634 271 50 12 chrX 123120814 123120975 -43529321 + ORR1D1 LTR MaLR 1 167 -207 1 1524 446 232 20 0 chrX 123120989 123121088 -43529208 + ORR1D1 LTR MaLR 272 372 -2 1 1524 1088 318 39 30 chrX 123121097 123121535 -43528761 - ORR1A4-int LTR MaLR -928 442 1 1 1524 229 191 0 0 chrX 123121553 123121595 -43528701 + (TATG)n Simple_repeat Simple_repeat 2 43 0 1 1524 460 323 31 25 chrX 123121618 123121779 -43528517 - MT2A LTR ERVL -154 379 218 1 1524 1655 246 21 28 chrX 123121779 123122201 -43528095 + RLTR11A2 LTR ERVK 3 421 -106 1 1524 815 298 0 38 chrX 123122241 123122478 -43527818 - MT2A LTR ERVL -305 228 1 1 1524 1047 334 114 3 chrX 123122526 123123149 -43527147 + Lx8 LINE L1 6422 7113 -360 1 1524 231 219 16 0 chrX 123123387 123123451 -43526845 + L1M2 LINE L1 2437 2501 -4348 1 1524 1462 206 15 71 chrX 123123772 123124112 -43526184 - ORR1A4 LTR MaLR -8 321 1 1 1524 3613 174 27 138 chrX 123124112 123124976 -43525320 - ORR1A4-int LTR MaLR 0 1963 1196 1 1524 475 338 0 38 chrX 123124982 123125142 -43525154 - RLTR20B3 LTR ERVK -33 544 391 1 1524 2663 189 25 65 chrX 123125142 123125713 -43524583 + RMER2 LTR ERV1 1 548 -19 1 1524 1335 168 60 55 chrX 123125707 123126054 -43524242 + RMER17C LTR ERVK 62 410 0 1 1524 1186 180 23 236 chrX 123126054 123126592 -43523704 - ORR1A4-int LTR MaLR -947 1016 598 1 1524 252 0 0 0 chrX 123126863 123126891 -43523405 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1 1524 207 0 0 0 chrX 123127091 123127114 -43523182 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1524 392 74 173 0 chrX 123127397 123127478 -43522818 + L1Md_F2 LINE L1 6448 6542 -40 1 1524 368 67 0 16 chrX 123127478 123127539 -43522757 + (TAAA)n Simple_repeat Simple_repeat 1 60 0 1 1524 1306 262 6 9 chrX 123127960 123128299 -43521997 - Lx5 LINE L1 0 7050 6713 1 1524 2155 253 23 4 chrX 123128301 123128861 -43521435 + Lx5 LINE L1 5928 6498 -552 1 1524 486 304 44 0 chrX 123129418 123129553 -43520743 + Lx5 LINE L1 6496 6636 -414 1 1524 38 61 0 0 chrX 123129683 123129749 -43520547 + AT_rich Low_complexity Low_complexity 1 66 0 1 1524 1018 173 0 0 chrX 123130715 123130888 -43519408 - Lx LINE L1 -401 6253 6081 1 1524 667 156 0 15 chrX 123130884 123131014 -43519282 + Lx LINE L1 6249 6376 -278 1 1524 838 131 45 7 chrX 123131014 123131168 -43519128 + Lx LINE L1 6495 6654 0 1 1524 3111 131 44 2 chrX 123131194 123131736 -43518560 + RLTR22_Mur LTR ERVK 476 1040 -808 1 1524 379 324 66 22 chrX 123131811 123132177 -43518119 - L1M3 LINE L1 -428 5755 5374 1 1524 189 0 0 0 chrX 123132382 123132403 -43517893 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1524 231 220 0 78 chrX 123132520 123132584 -43517712 - B1F SINE Alu 0 149 91 1 1524 215 388 38 0 chrX 123132665 123132745 -43517551 - B1F1 SINE Alu -51 98 16 1 1524 26 74 0 0 chrX 123132775 123132829 -43517467 + AT_rich Low_complexity Low_complexity 1 54 0 1 1524 711 302 55 24 chrX 123132913 123133330 -43516966 - Lx9 LINE L1 -151 7493 7064 1 1524 288 256 1 13 chrX 123133327 123133417 -43516879 - Lx9 LINE L1 -1006 6467 6391 1 1524 9998 124 55 14 chrX 123134932 123136555 -43513741 - RMER16-int LTR ERVK -865 4541 2877 1 1524 290 26 26 0 chrX 123136555 123136594 -43513702 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 1524 9998 124 55 14 chrX 123136594 123136769 -43513527 - RMER16-int LTR ERVK -2530 2876 2672 1 1524 1460 254 114 36 chrX 123136769 123137223 -43513073 + RMER16 LTR ERVK 1 533 0 1 1524 4636 204 97 44 chrX 123137223 123139381 -43510915 - RMER16-int LTR ERVK -3669 3737 1512 1 1524 914 220 204 74 chrX 123139378 123139467 -43510829 - RMER16-int LTR ERVK -5502 635 508 1 1524 428 0 19 0 chrX 123139467 123139519 -43510777 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1524 2723 126 132 14 chrX 123139519 123140035 -43510261 - RMER16-int LTR ERVK -4741 665 89 1 1524 22 0 0 0 chrX 123141005 123141027 -43509269 + AT_rich Low_complexity Low_complexity 1 22 0 1 1524 3582 66 23 2 chrX 123142009 123142481 -43507815 - RLTR45 LTR ERVK 0 482 1 1 1524 7462 41 0 2 chrX 123142481 123143395 -43506901 - RLTR45-int LTR ERVK 0 7244 6333 1 1524 2036 97 13 3 chrX 123143395 123143694 -43506602 - RLTR13B1 LTR ERVK -385 508 207 1 1524 2601 62 3 3 chrX 123143716 123144073 -43506223 - RLTR45-int LTR ERVK -1172 6072 5716 1 1524 36261 30 0 0 chrX 123144086 123150544 -43499752 - L1Md_T LINE L1 0 6585 31 1 1524 5062 47 3 11 chrX 123150544 123151208 -43499088 - RLTR45-int LTR ERVK -1521 5723 5065 1 1524 3726 85 28 42 chrX 123151201 123151817 -43498479 - RLTR45-int LTR ERVK -3258 3986 3380 1 1524 10872 41 61 2 chrX 123151787 123153538 -43496758 - RLTR45-int LTR ERVK -4032 3212 1358 1 1524 1053 58 0 0 chrX 123154202 123154340 -43495956 - RLTR45-int LTR ERVK -6426 818 681 1 1524 4137 67 107 20 chrX 123154640 123155277 -43495019 - RLTR45-int LTR ERVK -6552 692 1 1 1524 3582 66 23 2 chrX 123155277 123155749 -43494547 - RLTR45 LTR ERVK 0 482 1 1 1524 22 56 0 0 chrX 123156512 123156548 -43493748 + AT_rich Low_complexity Low_complexity 1 36 0 1 1524 225 0 0 0 chrX 123156682 123156707 -43493589 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 1524 550 0 29 0 chrX 123156707 123156776 -43493520 + (GA)n Simple_repeat Simple_repeat 1 72 0 1 1524 446 348 6 18 chrX 123156876 123157040 -43493256 + ID_B1 SINE B4 56 217 -7 1 1524 2444 71 65 0 chrX 123157084 123157409 -43492887 + ORR1A1 LTR MaLR 1 346 0 1 1524 12627 86 9 4 chrX 123157409 123159191 -43491105 + ORR1A1-int LTR MaLR 1 1792 0 1 1524 2324 60 66 0 chrX 123159191 123159508 -43490788 + ORR1A1 LTR MaLR 1 338 -8 1 1524 597 220 40 40 chrX 123159601 123159776 -43490520 - B2_Mm2 SINE B2 -19 176 2 1 1524 258 32 0 0 chrX 123159856 123159887 -43490409 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1524 566 342 35 0 chrX 123160002 123160201 -43490095 + ORR1D2 LTR MaLR 127 332 -38 1 1524 1170 154 20 0 chrX 123160509 123160704 -43489592 - ORR1A2 LTR MaLR -82 245 47 1 1524 2126 123 22 19 chrX 123160704 123160717 -43489579 - Lx3A LINE L1 -6 6975 6967 1 1524 258 32 0 0 chrX 123160717 123160748 -43489548 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 1 1524 2126 123 22 19 chrX 123160748 123161057 -43489239 - Lx3A LINE L1 -15 6966 6652 1 1524 1094 182 18 36 chrX 123161057 123161083 -43489213 - ORR1A2 LTR MaLR -280 66 47 1 1524 1602 212 17 58 chrX 123161109 123161234 -43489062 + RMER17C LTR ERVK 16 136 -274 1 1524 3077 72 182 2 chrX 123161234 123161668 -43488628 + RLTR1B LTR ERV1 1 512 0 1 1524 1602 212 17 58 chrX 123161668 123161952 -43488344 + RMER17C LTR ERVK 137 408 -2 1 1524 701 202 62 34 chrX 123161954 123162133 -43488163 + RMER17C-int LTR ERVK 1 184 -3054 1 1524 733 276 69 84 chrX 123162416 123162833 -43487463 + RMER16 LTR ERVK 1 499 -34 1 1524 22 0 0 0 chrX 123163077 123163099 -43487197 + GC_rich Low_complexity Low_complexity 1 22 0 1 1524 314 228 58 29 chrX 123163297 123163401 -43486895 + RMER17C-int LTR ERVK 361 467 -2771 1 1524 251 28 0 27 chrX 123163668 123163705 -43486591 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1524 1704 176 48 30 chrX 123164333 123164667 -43485629 + ORR1B1 LTR MaLR 1 340 -54 1 1524 4710 251 50 17 chrX 123164681 123164887 -43485409 - Lx5 LINE L1 -8 7042 6822 1 1524 192 77 0 0 chrX 123164887 123164913 -43485383 + (CAGG)n Simple_repeat Simple_repeat 1 26 0 1 1524 4710 251 50 17 chrX 123164913 123165734 -43484562 - Lx5 LINE L1 -229 6821 5977 1 1524 1423 47 0 107 chrX 123165734 123165949 -43484347 - B2_Mm1a SINE B2 0 193 2 1 1524 1060 83 14 0 chrX 123165952 123166096 -43484200 - B1_Mm SINE Alu 0 147 2 1 1524 4710 212 34 5 chrX 123166096 123166668 -43483628 - Lx5 LINE L1 -1074 5976 5385 1 1524 2800 91 69 5 chrX 123166668 123167086 -43483210 - L1Md_F2 LINE L1 -1 6581 6137 1 1524 3440 72 2 29 chrX 123167086 123167570 -43482726 + L1_Mm LINE L1 5123 5593 -290 1 1524 2109 212 51 14 chrX 123167567 123169076 -43481220 - Lx5 LINE L1 -487 5393 3001 1 1524 409 219 22 51 chrX 123169085 123169263 -43481033 - RMER17C LTR ERVK -135 275 103 1 1524 1006 150 45 0 chrX 123169265 123169465 -43480831 - Lx5 LINE L1 -2872 3014 2806 1 1524 557 179 187 40 chrX 123169452 123169607 -43480689 - Lx5 LINE L1 -4165 1721 1533 1 1524 405 0 0 0 chrX 123169607 123169652 -43480644 + (TTCC)n Simple_repeat Simple_repeat 1 45 0 1 1524 1443 39 0 0 chrX 123169652 123169830 -43480466 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 1 1524 683 144 176 0 chrX 123169830 123169955 -43480341 - B1_Mus1 SINE Alu 0 148 2 1 1524 557 179 187 40 chrX 123169955 123169995 -43480301 - Lx5 LINE L1 -4354 1532 1497 1 1524 2315 168 39 45 chrX 123169992 123170454 -43479842 + Lx LINE L1 6178 6636 -18 1 1524 9947 138 35 49 chrX 123170488 123173114 -43477182 - L1VL2 LINE L1 -1014 2601 37 1 1524 375 23 0 0 chrX 123173115 123173159 -43477137 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 1 1524 2815 180 34 74 chrX 123173639 123174263 -43476033 + MT2B LTR ERVL 1 599 -2 1 1524 24 32 0 0 chrX 123174446 123174477 -43475819 + AT_rich Low_complexity Low_complexity 1 31 0 1 1524 1007 123 17 17 chrX 123174594 123174767 -43475529 + L1_Mus4 LINE L1 5686 5858 -778 1 1524 300 27 0 0 chrX 123174767 123174804 -43475492 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1524 299 105 18 0 chrX 123174823 123174880 -43475416 + (CAAAAA)n Simple_repeat Simple_repeat 2 59 0 1 1524 4707 143 5 34 chrX 123174887 123175674 -43474622 + Lx LINE L1 5868 6631 -23 1 1524 12753 159 13 37 chrX 123175713 123178782 -43471514 + L1VL4 LINE L1 148 3131 -428 1 1524 1502 133 0 0 chrX 123178777 123179003 -43471293 + L1_Mm LINE L1 5289 5514 -369 1 1524 2231 132 114 19 chrX 123179003 123179138 -43471158 - RMER17D2 LTR ERVK -250 559 340 1 1524 846 62 0 30 chrX 123179138 123179271 -43471025 + (GGAGA)n Simple_repeat Simple_repeat 1 129 0 1 1524 2231 121 15 18 chrX 123179271 123179454 -43470842 - RMER17D2 LTR ERVK -470 339 156 1 1524 294 50 0 0 chrX 123179454 123179494 -43470802 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1524 2231 121 15 18 chrX 123179494 123179648 -43470648 - RMER17D2 LTR ERVK -654 155 2 1 1524 2787 125 14 0 chrX 123179648 123180071 -43470225 - Lx2A1 LINE L1 -986 6022 5594 1 1524 2570 93 26 3 chrX 123180120 123180508 -43469788 - L1_Mus4 LINE L1 0 6636 6240 1 1524 597 296 114 24 chrX 123180687 123181151 -43469145 - L1M3 LINE L1 -1017 5123 4618 2 1524 400 277 244 14 chrX 123181187 123181462 -43468834 - L1M3 LINE L1 -1834 4309 3972 2 1524 1130 179 20 0 chrX 123181914 123182110 -43468186 - ORR1A3 LTR MaLR 0 326 127 2 1524 629 360 66 40 chrX 123182230 123182950 -43467346 + MTE-int LTR MaLR 745 1529 -51 2 1524 1265 241 100 84 chrX 123182963 123183453 -43466843 - RMER1C Other Other -2 1340 843 2 1524 350 294 0 0 chrX 123183464 123183549 -43466747 + RMER1C Other Other 736 820 -522 2 1524 8456 96 20 2 chrX 123183879 123184759 -43465537 + L1Md_F2 LINE L1 4347 5234 -649 2 1524 432 0 0 0 chrX 123184759 123184807 -43465489 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1524 8456 96 20 2 chrX 123184807 123185143 -43465153 + L1Md_F2 LINE L1 5235 5584 -299 2 1524 7130 97 0 4 chrX 123185143 123186130 -43464166 + L1Md_F2 LINE L1 5587 6569 -13 2 1524 24686 131 55 14 chrX 123186276 123188938 -43461358 - L1_Mus2 LINE L1 0 6566 3459 2 1524 180 0 0 0 chrX 123188938 123188958 -43461338 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 1524 24686 93 31 16 chrX 123188958 123189405 -43460891 - L1_Mus2 LINE L1 -2420 3463 3022 2 1524 1643 191 20 3 chrX 123189405 123189709 -43460587 - RLTR27 LTR ERVK 0 309 1 2 1524 24686 93 31 16 chrX 123189709 123191555 -43458741 - L1_Mus2 LINE L1 -2862 3021 1216 2 1524 605 0 0 0 chrX 123191580 123191655 -43458641 - L1Md_A LINE L1 0 6582 6508 2 1524 13884 6 0 0 chrX 123191655 123193235 -43457061 + L1_Mm LINE L1 3279 4858 -1025 2 1524 4930 131 67 0 chrX 123193232 123194024 -43456272 - L1_Mus2 LINE L1 -5391 1225 381 2 1524 369 148 108 27 chrX 123194359 123194470 -43455826 + L1_Mur3 LINE L1 3152 3271 -2609 2 1524 2855 12 0 0 chrX 123194518 123194840 -43455456 - RLTRETN_Mm LTR ERVK 0 322 1 2 1524 41570 22 3 4 chrX 123194840 123199687 -43450609 - MMETn-int LTR ERVK 0 4844 1 2 1524 2796 22 0 0 chrX 123199687 123200009 -43450287 - RLTRETN_Mm LTR ERVK 0 322 1 2 1524 43 47 0 0 chrX 123200027 123200091 -43450205 + AT_rich Low_complexity Low_complexity 1 64 0 2 1524 286 410 44 57 chrX 123200542 123200909 -43449387 - MLT1A0 LTR MaLR 0 365 4 2 1524 733 271 65 32 chrX 123201291 123201691 -43448605 - L1M4 LINE L1 -5084 1458 1046 2 1524 643 234 43 0 chrX 123201711 123201852 -43448444 - B1_Mus1 SINE Alu -1 147 1 2 1524 23 0 0 0 chrX 123201914 123201937 -43448359 + AT_rich Low_complexity Low_complexity 1 23 0 2 1524 882 280 93 44 chrX 123202176 123202560 -43447736 + MTD LTR MaLR 10 405 -14 2 1524 319 261 23 0 chrX 123202670 123202758 -43447538 - L1MA9 LINE L1 -399 5913 5824 2 1524 26 0 0 0 chrX 123202883 123202909 -43447387 + AT_rich Low_complexity Low_complexity 1 26 0 2 1524 3205 183 52 47 chrX 123202990 123204361 -43445935 - L1Md_F LINE L1 -2165 1652 124 2 1524 321 185 149 21 chrX 123204925 123205019 -43445277 - RLTR22_Mur LTR ERVK 0 1848 1743 2 1524 682 109 16 0 chrX 123205072 123205200 -43445096 + (TA)n Simple_repeat Simple_repeat 1 130 0 2 1524 292 301 60 31 chrX 123205660 123205870 -43444426 - MTE-int LTR MaLR -179 1556 1320 2 1524 474 351 55 33 chrX 123205967 123206113 -43444183 + RMER15 LTR ERVL 293 435 -140 2 1524 461 294 52 0 chrX 123206113 123206249 -43444047 - B1_Mus2 SINE Alu 0 147 5 2 1524 474 351 55 33 chrX 123206249 123206376 -43443920 + RMER15 LTR ERVL 436 572 -3 2 1524 396 401 52 12 chrX 123206379 123206705 -43443591 + RMER15-int LTR ERVL 1 339 -4660 2 1524 591 324 38 28 chrX 123206809 123207098 -43443198 + RMER15-int LTR ERVL 477 768 -4231 2 1525 252 0 0 0 chrX 123207747 123207775 -43442521 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1525 21 0 0 0 chrX 123208188 123208209 -43442087 + AT_rich Low_complexity Low_complexity 1 21 0 2 1525 4467 164 15 2 chrX 123208392 123209181 -43441115 + Lx2 LINE L1 6198 6996 -1 2 1525 434 100 73 24 chrX 123209532 123209614 -43440682 + L1_Mur2 LINE L1 2805 2890 -2987 2 1525 9515 165 53 84 chrX 123209628 123213265 -43437031 + L1_Mus1 LINE L1 3 3060 -2823 2 1525 427 110 0 0 chrX 123213265 123213338 -43436958 + L1_Mus3 LINE L1 6562 6634 -4 2 1525 8619 186 16 13 chrX 123213338 123215211 -43435085 + L1_Mus1 LINE L1 3056 4943 -940 2 1525 7705 267 57 11 chrX 123215211 123217385 -43432911 - MERVL_2A-int LTR ERVL -1520 4241 1968 2 1525 4690 79 11 2 chrX 123217389 123218039 -43432257 + L1_Mus1 LINE L1 5781 6437 -130 2 1525 1500 279 31 24 chrX 123219188 123219699 -43430597 - MERVL_2A-int LTR ERVL -3826 1935 1421 2 1525 439 182 0 0 chrX 123219707 123219784 -43430512 + MTC LTR MaLR 2 78 -343 2 1525 853 251 138 17 chrX 123219786 123220082 -43430214 - MERVL_2A-int LTR ERVL -4467 1294 963 2 1525 1140 182 80 69 chrX 123220171 123220376 -43429920 - RMER16 LTR ERVK 0 533 344 2 1525 1040 95 0 0 chrX 123220376 123220513 -43429783 + B1_Mm SINE Alu 1 137 -10 2 1525 210 37 0 0 chrX 123220513 123220540 -43429756 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1525 1140 182 80 69 chrX 123220540 123220622 -43429674 - RMER16 LTR ERVK -190 343 243 2 1525 212 0 36 0 chrX 123220702 123220730 -43429566 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 1525 37 62 0 0 chrX 123220732 123220797 -43429499 + AT_rich Low_complexity Low_complexity 1 65 0 2 1525 6221 129 50 4 chrX 123220801 123222291 -43428005 - L1_Mus4 LINE L1 -5 6631 5076 2 1525 425 187 35 108 chrX 123222297 123222430 -43427866 - RMER16 LTR ERVK -325 208 1 2 1525 468 0 0 0 chrX 123225848 123225900 -43424396 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1525 1755 228 58 5 chrX 123226069 123226483 -43423813 - L1_Mur3 LINE L1 -157 5723 5288 2 1525 329 182 0 0 chrX 123226489 123226566 -43423730 - L1Md_F2 LINE L1 -5 6577 6501 2 1525 4830 144 23 36 chrX 123226569 123227996 -43422300 - L1_Mus2 LINE L1 -424 6142 4740 2 1525 513 287 37 14 chrX 123228686 123228901 -43421395 - ERVL-int LTR ERVL -4322 1439 1188 2 1525 440 62 0 15 chrX 123229318 123229383 -43420913 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 1525 363 44 0 0 chrX 123229917 123229962 -43420334 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 1525 257 378 33 56 chrX 123230191 123230404 -43419892 - MT2A LTR ERVL -154 379 172 2 1525 219 95 43 100 chrX 123230746 123230816 -43419480 + A-rich Low_complexity Low_complexity 1 66 0 2 1525 641 344 26 9 chrX 123231396 123231622 -43418674 + Lx8 LINE L1 7051 7280 -193 2 1525 290 178 219 0 chrX 123232954 123233027 -43417269 + L1M LINE L1 5280 5368 -991 2 1525 1880 164 16 0 chrX 123233028 123233332 -43416964 - RLTR27 LTR ERVK 0 309 1 2 1525 1456 165 4 26 chrX 123233332 123233599 -43416697 - MMERVK10C-int LTR ERVK 0 7581 7321 2 1525 1985 69 104 13 chrX 123233781 123234231 -43416065 - IAP-d-int LTR ERVK -1045 5497 5007 2 1525 737 179 81 33 chrX 123234231 123234498 -43415798 - IAP-d-int LTR ERVK -6039 503 41 2 1525 1694 80 22 171 chrX 123234599 123234962 -43415334 - RLTR10-int LTR ERVK -1135 852 544 2 1525 291 116 0 0 chrX 123234948 123234991 -43415305 - RLTR10-int LTR ERVK -7314 267 225 2 1525 1981 138 16 0 chrX 123235028 123235332 -43414964 - RLTR27 LTR ERVK 0 309 1 2 1525 3438 113 145 5 chrX 123235390 123236039 -43414257 + L1_Mus2 LINE L1 5782 6604 -34 2 1525 267 54 0 0 chrX 123236162 123236199 -43414097 + (TTAA)n Simple_repeat Simple_repeat 1 37 0 2 1525 388 348 17 0 chrX 123236237 123236352 -43413944 + RSINE1 SINE B4 4 120 -45 2 1525 1677 144 7 0 chrX 123237039 123237323 -43412973 - L1_Mus4 LINE L1 0 6636 6351 2 1525 270 75 0 0 chrX 123237325 123237365 -43412931 - L1_Mur2 LINE L1 -3480 2397 2358 2 1525 421 149 0 36 chrX 123237588 123237699 -43412597 + (CA)n Simple_repeat Simple_repeat 2 108 0 2 1525 1468 196 15 77 chrX 123237789 123238126 -43412170 - ORR1A4 LTR MaLR -8 321 6 2 1525 472 298 0 22 chrX 123238161 123238343 -43411953 + (CAGA)n Simple_repeat Simple_repeat 1 178 0 2 1525 242 358 8 0 chrX 123238278 123238401 -43411895 + (CAAA)n Simple_repeat Simple_repeat 2 125 0 2 1525 198 0 0 0 chrX 123238401 123238423 -43411873 + (CAGA)n Simple_repeat Simple_repeat 4 25 0 2 1525 293 356 0 6 chrX 123238475 123238653 -43411643 + (CA)n Simple_repeat Simple_repeat 2 178 0 2 1525 201 178 0 0 chrX 123238675 123238720 -43411576 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 2 1525 3092 174 14 72 chrX 123238751 123238814 -43411482 - MT2B LTR ERVL 0 601 545 2 1525 2349 66 3 6 chrX 123238814 123239135 -43411161 + L1Md_F2 LINE L1 6263 6582 0 2 1525 3092 174 14 72 chrX 123239135 123239709 -43410587 - MT2B LTR ERVL -57 544 1 2 1525 434 339 0 12 chrX 123239713 123239886 -43410410 + (CAGA)n Simple_repeat Simple_repeat 3 173 0 2 1525 405 307 11 20 chrX 123239919 123240210 -43410086 + (CAGA)n Simple_repeat Simple_repeat 1 288 0 2 1525 330 26 0 0 chrX 123240225 123240264 -43410032 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1525 312 331 28 0 chrX 123240268 123240410 -43409886 + (CAGA)n Simple_repeat Simple_repeat 3 148 0 2 1525 263 204 0 22 chrX 123240432 123240522 -43409774 + (CAGA)n Simple_repeat Simple_repeat 3 90 0 2 1525 1942 147 39 25 chrX 123240587 123240657 -43409639 + RMER17D LTR ERVK 1 67 -822 2 1525 2415 108 36 58 chrX 123240657 123241069 -43409227 + RLTR9D LTR ERVK 1 403 0 2 1525 1942 147 39 25 chrX 123241069 123241313 -43408983 + RMER17D LTR ERVK 68 323 -566 2 1525 633 14 0 0 chrX 123241313 123241387 -43408909 + (TCTCC)n Simple_repeat Simple_repeat 1 74 0 2 1525 1942 175 53 34 chrX 123241387 123241747 -43408549 + RMER17D LTR ERVK 324 808 -1 2 1525 215 286 22 13 chrX 123241857 123242088 -43408208 + (CAGA)n Simple_repeat Simple_repeat 1 233 0 2 1525 191 195 0 25 chrX 123242100 123242179 -43408117 + (CAGA)n Simple_repeat Simple_repeat 2 78 0 2 1525 372 292 0 33 chrX 123242198 123242382 -43407914 + (CAGA)n Simple_repeat Simple_repeat 3 180 0 2 1525 225 0 0 0 chrX 123242409 123242434 -43407862 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1525 2374 210 90 120 chrX 123242971 123243762 -43406534 - RLTR40 LTR ERVK -48 769 3 2 1525 355 315 28 0 chrX 123243854 123243997 -43406299 - MER44B DNA MER2_type -43 507 361 2 1525 324 330 83 0 chrX 123245838 123245947 -43404349 - Tigger5 DNA MER2_type -2281 125 8 2 1525 587 65 250 0 chrX 123246010 123246102 -43404194 + B1_Mus1 SINE Alu 26 140 -8 2 1525 212 0 36 0 chrX 123246102 123246130 -43404166 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2 1525 3702 115 50 0 chrX 123246641 123247187 -43403109 + L1_Mus4 LINE L1 5915 6487 -149 2 1525 748 131 0 0 chrX 123247189 123247320 -43402976 - L1_Mus4 LINE L1 -189 5694 5564 2 1525 35153 73 2 16 chrX 123247313 123253422 -43396874 - L1Md_F2 LINE L1 -11 6571 556 2 1525 32 26 0 0 chrX 123254033 123254072 -43396224 + AT_rich Low_complexity Low_complexity 1 39 0 2 1525 383 314 153 4 chrX 123254340 123254602 -43395694 + L1M2 LINE L1 4065 4365 -1778 2 1525 429 36 0 0 chrX 123255768 123255823 -43394473 + (TC)n Simple_repeat Simple_repeat 1 55 0 2 1525 327 249 110 32 chrX 123255865 123256081 -43394215 - Lx8 LINE L1 -139 7505 7142 2 1525 374 332 75 29 chrX 123256580 123256859 -43393437 + ERVL-B4-int LTR ERVL 2191 2482 -3232 2 1525 483 352 11 0 chrX 123256919 123257098 -43393198 + MLT2B4 LTR ERVL 6 186 -370 2 1525 368 278 0 53 chrX 123257146 123257260 -43393036 - B3 SINE B2 -107 109 2 2 1525 260 255 174 45 chrX 123257678 123257920 -43392376 - L1MB3 LINE L1 -36 6147 5875 2 1525 351 0 0 0 chrX 123257982 123258021 -43392275 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1525 7476 148 49 29 chrX 123258095 123259607 -43390689 + Lx3B LINE L1 5428 6967 -6 2 1525 1708 218 57 13 chrX 123259673 123260058 -43390238 - Lx5 LINE L1 -1 7049 6648 2 1525 450 0 0 0 chrX 123260407 123260457 -43389839 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 1525 2263 82 122 202 chrX 123260645 123261161 -43389135 - MT2C_Mm LTR ERVL 0 475 1 3 1525 615 48 0 0 chrX 123261162 123261245 -43389051 + (TATG)n Simple_repeat Simple_repeat 4 86 0 3 1525 5452 133 33 7 chrX 123261246 123261342 -43388954 - Lx3A LINE L1 -11 6970 6878 3 1525 185 0 40 0 chrX 123261342 123261367 -43388929 + (CCCCCA)n Simple_repeat Simple_repeat 3 28 0 3 1525 5452 133 33 7 chrX 123261367 123262154 -43388142 - Lx3A LINE L1 -104 6877 6065 3 1525 5141 143 18 14 chrX 123262343 123262500 -43387796 + Lx LINE L1 5776 5937 -717 3 1525 2379 159 9 44 chrX 123262500 123262935 -43387361 + RLTR9B2 LTR ERVK 1 420 0 3 1525 5141 143 18 14 chrX 123262935 123263645 -43386651 + Lx LINE L1 5938 6647 -7 3 1525 241 294 75 22 chrX 123263654 123263922 -43386374 - L1M3 LINE L1 -1296 4850 4569 3 1525 27 49 0 0 chrX 123263922 123263963 -43386333 + AT_rich Low_complexity Low_complexity 1 41 0 3 1525 1668 252 48 62 chrX 123264222 123264999 -43385297 - RMER12 LTR ERVK -1089 759 1 3 1525 336 336 0 8 chrX 123265190 123265313 -43384983 + Lx9 LINE L1 7339 7460 -184 3 1525 5155 109 5 29 chrX 123265311 123266480 -43383816 - Lx3_Mus LINE L1 -763 6246 5123 3 1525 305 283 77 6 chrX 123266481 123266662 -43383634 - L1M3 LINE L1 -1702 4438 4245 3 1525 6194 89 32 8 chrX 123267090 123268000 -43382296 - L1_Mus1 LINE L1 0 6567 5675 3 1525 204 83 56 0 chrX 123268128 123268164 -43382132 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 3 1525 1112 327 67 58 chrX 123268269 123268922 -43381374 + L1_Mur3 LINE L1 4328 4969 -911 3 1525 213 39 0 0 chrX 123268922 123268948 -43381348 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 1525 898 147 7 0 chrX 123268948 123269084 -43381212 - B1_Mus1 SINE Alu -9 139 3 3 1525 1112 327 67 58 chrX 123269084 123269904 -43380392 + L1_Mur3 LINE L1 4970 5814 -66 3 1525 972 318 16 7 chrX 123269931 123270238 -43380058 + Lx8 LINE L1 6979 7288 -185 3 1525 28 61 0 0 chrX 123270314 123270363 -43379933 + AT_rich Low_complexity Low_complexity 1 49 0 3 1525 816 178 0 33 chrX 123270968 123271119 -43379177 - B1_Mur4 SINE Alu 0 150 5 3 1525 4912 60 0 5 chrX 123271130 123271755 -43378541 - L1Md_F2 LINE L1 -2 6580 5959 3 1525 17180 68 0 0 chrX 123271755 123273978 -43376318 + L1Md_F2 LINE L1 3362 5585 -298 3 1525 7951 54 1 1 chrX 123273979 123274975 -43375321 + L1Md_F2 LINE L1 5587 6582 0 3 1525 302 274 0 26 chrX 123275824 123275940 -43374356 - L1MA8 LINE L1 -130 6161 6049 3 1525 2981 239 43 48 chrX 123276195 123277013 -43373283 + RLTR40 LTR ERVK 1 814 -3 3 1525 396 0 0 0 chrX 123277357 123277401 -43372895 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 3 1525 5340 150 8 26 chrX 123277405 123277857 -43372439 - Lx3A LINE L1 -18 6963 6513 3 1525 5969 122 42 49 chrX 123277857 123278897 -43371399 - RLTR13D4 LTR ERVK 0 1033 1 3 1525 5340 150 8 26 chrX 123278897 123279401 -43370895 - Lx3A LINE L1 -469 6512 6024 3 1525 715 381 45 45 chrX 123279949 123280392 -43369904 + LTR53 LTR ERVL 75 517 -2 3 1525 928 100 20 0 chrX 123280931 123281081 -43369215 + (GAAA)n Simple_repeat Simple_repeat 3 155 0 3 1525 1253 64 6 0 chrX 123281120 123281292 -43369004 + (GGAGA)n Simple_repeat Simple_repeat 4 176 0 3 1525 504 95 0 0 chrX 123281294 123281378 -43368918 + (GAGAA)n Simple_repeat Simple_repeat 1 84 0 3 1525 268 188 0 28 chrX 123281886 123281957 -43368339 + GA-rich Low_complexity Low_complexity 1 69 0 3 1525 234 325 0 8 chrX 123282314 123282432 -43367864 - L1MCa LINE L1 -4721 1787 1671 3 1525 183 42 0 0 chrX 123282903 123282927 -43367369 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1525 26257 147 15 7 chrX 123283251 123286765 -43363531 + L1_Mus3 LINE L1 1184 4733 -1150 3 1525 258 32 0 0 chrX 123286765 123286796 -43363500 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1525 26257 133 24 12 chrX 123286796 123288682 -43361614 + L1_Mus3 LINE L1 4734 6636 -2 3 1525 996 103 14 0 chrX 123288714 123288859 -43361437 + B1_Mus1 SINE Alu 1 147 -1 3 1525 3014 73 41 45 chrX 123291681 123292165 -43358131 + RLTR45 LTR ERVK 1 482 0 3 1525 1126 55 7 0 chrX 123292475 123292620 -43357676 + B1_Mus2 SINE Alu 2 147 0 3 1525 192 97 0 0 chrX 123292625 123292656 -43357640 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1525 21 36 0 0 chrX 123293963 123293991 -43356305 + AT_rich Low_complexity Low_complexity 1 28 0 3 1525 21 36 0 0 chrX 123294332 123294360 -43355936 + AT_rich Low_complexity Low_complexity 1 28 0 3 1525 23 33 0 0 chrX 123294979 123295009 -43355287 + AT_rich Low_complexity Low_complexity 1 30 0 3 1525 525 94 0 0 chrX 123295594 123295679 -43354617 + L1Md_F3 LINE L1 6488 6572 -12 3 1525 21 36 0 0 chrX 123296365 123296393 -43353903 + AT_rich Low_complexity Low_complexity 1 28 0 3 1525 418 106 0 12 chrX 123296977 123297063 -43353233 + L1Md_F3 LINE L1 6488 6572 -12 3 1525 23 33 0 0 chrX 123297752 123297782 -43352514 + AT_rich Low_complexity Low_complexity 1 30 0 3 1525 21 36 0 0 chrX 123298083 123298111 -43352185 + AT_rich Low_complexity Low_complexity 1 28 0 3 1525 468 107 0 0 chrX 123298365 123298449 -43351847 + L1Md_F3 LINE L1 6488 6571 -13 3 1525 21 36 0 0 chrX 123299144 123299172 -43351124 + AT_rich Low_complexity Low_complexity 1 28 0 3 1525 361 139 11 34 chrX 123299754 123299843 -43350453 + L1Md_F2 LINE L1 6489 6575 -7 3 1525 493 84 12 0 chrX 123301140 123301223 -43349073 + L1Md_F3 LINE L1 6488 6571 -13 3 1525 27 29 0 0 chrX 123301908 123301942 -43348354 + AT_rich Low_complexity Low_complexity 1 34 0 3 1525 28 29 0 0 chrX 123302403 123302438 -43347858 + AT_rich Low_complexity Low_complexity 1 35 0 3 1525 506 101 0 33 chrX 123303021 123303113 -43347183 + L1Md_F2 LINE L1 6489 6577 -5 3 1525 22 35 0 0 chrX 123303792 123303821 -43346475 + AT_rich Low_complexity Low_complexity 1 29 0 3 1525 532 71 0 23 chrX 123304405 123304492 -43345804 + L1Md_F3 LINE L1 6488 6572 -12 3 1525 28 29 0 0 chrX 123305174 123305209 -43345087 + AT_rich Low_complexity Low_complexity 1 35 0 3 1525 511 92 0 33 chrX 123305791 123305881 -43344415 + L1Md_F2 LINE L1 6489 6575 -7 3 1525 22 35 0 0 chrX 123306565 123306594 -43343702 + AT_rich Low_complexity Low_complexity 1 29 0 3 1525 461 118 0 23 chrX 123306850 123306937 -43343359 + L1Md_F3 LINE L1 6488 6572 -12 3 1525 21 36 0 0 chrX 123307622 123307650 -43342646 + AT_rich Low_complexity Low_complexity 1 28 0 3 1525 498 103 0 33 chrX 123308234 123308324 -43341972 + L1Md_F2 LINE L1 6489 6575 -7 3 1525 27 49 0 0 chrX 123308624 123308665 -43341631 + AT_rich Low_complexity Low_complexity 1 41 0 3 1525 23 33 0 0 chrX 123309011 123309041 -43341255 + AT_rich Low_complexity Low_complexity 1 30 0 3 1525 458 115 0 44 chrX 123309626 123309717 -43340579 + L1Md_F2 LINE L1 6489 6575 -7 3 1525 22 35 0 0 chrX 123310406 123310435 -43339861 + AT_rich Low_complexity Low_complexity 1 29 0 3 1525 21 36 0 0 chrX 123310736 123310764 -43339532 + AT_rich Low_complexity Low_complexity 1 28 0 3 1525 472 126 0 33 chrX 123311017 123311107 -43339189 + L1Md_F2 LINE L1 6489 6575 -7 3 1525 21 36 0 0 chrX 123311785 123311813 -43338483 + AT_rich Low_complexity Low_complexity 1 28 0 3 1525 26 0 0 0 chrX 123312106 123312132 -43338164 + AT_rich Low_complexity Low_complexity 1 26 0 3 1525 512 92 0 33 chrX 123312396 123312486 -43337810 + L1Md_F2 LINE L1 6489 6575 -7 3 1525 27 49 0 0 chrX 123312786 123312827 -43337469 + AT_rich Low_complexity Low_complexity 1 41 0 3 1525 23 33 0 0 chrX 123313170 123313200 -43337096 + AT_rich Low_complexity Low_complexity 1 30 0 3 1525 21 0 0 0 chrX 123313849 123313870 -43336426 + AT_rich Low_complexity Low_complexity 1 21 0 3 1525 31 58 0 0 chrX 123315878 123315930 -43334366 + AT_rich Low_complexity Low_complexity 1 52 0 3 1525 22 56 0 0 chrX 123316463 123316499 -43333797 + AT_rich Low_complexity Low_complexity 1 36 0 3 1525 423 0 0 0 chrX 123316901 123316948 -43333348 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 3 1525 5939 57 1 1 chrX 123316956 123317710 -43332586 - L1Md_F2 LINE L1 -12 6570 5817 3 1525 187 290 27 55 chrX 123318420 123318493 -43331803 + L3 LINE CR1 2497 2567 -1922 3 1525 22 0 0 0 chrX 123318493 123318515 -43331781 + AT_rich Low_complexity Low_complexity 1 22 0 3 1525 22 56 0 0 chrX 123318672 123318708 -43331588 + AT_rich Low_complexity Low_complexity 1 36 0 3 1525 21 36 0 0 chrX 123319881 123319909 -43330387 + AT_rich Low_complexity Low_complexity 1 28 0 3 1525 1174 61 0 0 chrX 123320106 123320253 -43330043 + B1_Mm SINE Alu 1 147 0 3 1525 216 111 0 0 chrX 123320255 123320291 -43330005 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1525 3761 19 0 0 chrX 123320747 123321179 -43329117 - L1Md_T LINE L1 -275 5608 5177 3 1525 8325 32 1 0 chrX 123321183 123322178 -43328118 + L1Md_T LINE L1 5587 6582 0 3 1525 26 88 0 0 chrX 123322501 123322569 -43327727 + AT_rich Low_complexity Low_complexity 1 68 0 3 1525 22 56 0 0 chrX 123322747 123322783 -43327513 + AT_rich Low_complexity Low_complexity 1 36 0 3 1525 23 86 0 0 chrX 123323227 123323285 -43327011 + AT_rich Low_complexity Low_complexity 1 58 0 3 1525 30 59 0 0 chrX 123324860 123324911 -43325385 + AT_rich Low_complexity Low_complexity 1 51 0 3 1525 25 51 0 0 chrX 123326940 123326979 -43323317 + AT_rich Low_complexity Low_complexity 1 39 0 3 1525 1222 239 106 0 chrX 123327861 123328145 -43322151 + ORR1B1 LTR MaLR 73 386 -8 3 1525 920 156 31 6 chrX 123328453 123328614 -43321682 + URR1A DNA MER1_type 62 226 0 3 1525 6526 154 24 7 chrX 123328769 123330523 -43319773 - L1_Mus4 LINE L1 -7 6629 4857 3 1525 13410 119 11 27 chrX 123330524 123333622 -43316674 - L1_Mus1 LINE L1 0 6567 3852 3 1525 212 0 0 35 chrX 123333622 123333651 -43316645 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 3 1525 12561 149 8 185 chrX 123333651 123335540 -43314756 - L1_Mus1 LINE L1 -2032 3851 2182 3 1525 33 43 0 0 chrX 123335697 123335744 -43314552 + AT_rich Low_complexity Low_complexity 1 47 0 3 1525 688 325 63 105 chrX 123335804 123336168 -43314128 + ORR1E LTR MaLR 3 351 -19 3 1525 1868 245 77 14 chrX 123336793 123337285 -43313011 - RMER5 LTR ERV1 -11 523 1 3 1525 416 264 119 51 chrX 123337380 123337400 -43312896 - ORR1D1 LTR MaLR -184 194 175 3 1525 288 77 0 0 chrX 123337400 123337439 -43312857 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1525 585 0 0 0 chrX 123337439 123337503 -43312793 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 1525 523 235 28 66 chrX 123337503 123337657 -43312639 - ORR1D1 LTR MaLR -204 174 7 3 190 28774 124 10 4 chrX 123338045 123343617 -43306679 - L1_Mus2 LINE L1 -1 6565 961 4 1526 505 258 0 0 chrX 123343756 123343876 -43306420 + MTC LTR MaLR 1 120 -301 4 1526 971 66 0 0 chrX 123343877 123343999 -43306297 + L1_Mm LINE L1 4735 4856 -1027 4 1526 21 0 0 0 chrX 123344153 123344174 -43306122 + AT_rich Low_complexity Low_complexity 1 21 0 4 1526 597 136 0 0 chrX 123344174 123344277 -43306019 - Lx2 LINE L1 -11 6986 6884 4 1526 2813 111 14 0 chrX 123345288 123345703 -43304593 - BGLII LTR ERVK 0 421 1 4 1526 1206 249 186 45 chrX 123346346 123346834 -43303462 + RMER2 LTR ERV1 11 567 0 4 1526 24 0 0 0 chrX 123346974 123346998 -43303298 + AT_rich Low_complexity Low_complexity 1 24 0 4 1526 645 138 0 0 chrX 123347952 123348097 -43302199 + (TTC)n Simple_repeat Simple_repeat 3 147 0 4 1526 180 0 0 0 chrX 123350910 123350930 -43299366 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 4 1526 302 213 33 0 chrX 123351067 123351128 -43299168 - HAL1-3A_ME LINE L1 -820 2038 1976 4 1526 225 0 0 0 chrX 123351310 123351335 -43298961 + (CAT)n Simple_repeat Simple_repeat 2 26 0 4 1526 414 0 0 0 chrX 123352529 123352575 -43297721 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 4 1526 436 314 20 21 chrX 123352945 123353140 -43297156 + MTD LTR MaLR 8 210 -211 4 1526 3255 129 51 9 chrX 123353889 123354421 -43295875 - Lx LINE L1 0 6654 6101 4 1526 441 311 59 33 chrX 123354883 123355338 -43294958 + L1_Mur3 LINE L1 1212 1678 -4202 4 1526 539 232 0 8 chrX 123355333 123355459 -43294837 + L1_Mur3 LINE L1 3901 4025 -1855 4 1526 1422 131 31 0 chrX 123355436 123355665 -43294631 + L1_Mus1 LINE L1 6310 6545 -22 4 1526 38456 6 1 1 chrX 123355667 123361429 -43288867 + L1Md_A LINE L1 1 5586 -297 4 1526 8970 5 0 0 chrX 123361429 123362425 -43287871 + L1Md_A LINE L1 5587 6582 0 4 1526 4968 27 12 0 chrX 123362428 123363025 -43287271 + L1Md_T LINE L1 4983 5586 -297 4 1526 8388 35 1 0 chrX 123363025 123364018 -43286278 + L1Md_T LINE L1 5587 6580 -2 4 1526 11235 98 2 4 chrX 123364018 123365635 -43284661 + L1Md_F2 LINE L1 3974 5586 -297 4 1526 6725 100 15 37 chrX 123365635 123366652 -43283644 + L1Md_F2 LINE L1 5587 6580 -2 4 1526 5322 103 28 24 chrX 123366652 123367644 -43282652 - L1VL4 LINE L1 -1803 1756 765 4 1526 351 0 0 0 chrX 123367644 123367683 -43282613 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 4 1526 1092 69 14 0 chrX 123367688 123367832 -43282464 - B1_Mm SINE Alu -1 146 1 4 1526 4556 158 5 17 chrX 123367832 123368399 -43281897 - L1VL4 LINE L1 -5539 763 195 4 1526 2577 59 2 184 chrX 123368885 123369359 -43280937 + RLTR10 LTR ERVK 1 388 -2 4 1526 258 195 37 49 chrX 123369692 123369773 -43280523 + L1_Mus2 LINE L1 185 264 -6352 4 1526 6070 86 5 17 chrX 123369777 123370663 -43279633 - RLTR13A3 LTR ERVK 0 978 1 4 1526 2367 227 51 57 chrX 123370664 123371291 -43279005 + L1_Mus2 LINE L1 508 1119 -5497 4 1526 1126 75 7 0 chrX 123371291 123371437 -43278859 + B1_Mm SINE Alu 1 147 0 4 1526 2367 165 1 21 chrX 123371437 123371836 -43278460 + L1_Mus2 LINE L1 1120 1486 -2428 4 1526 14256 145 9 12 chrX 123371847 123374396 -43275900 + L1_Mus1 LINE L1 1209 3750 -2133 4 1526 8482 27 0 0 chrX 123374423 123375542 -43274754 - L1Md_T LINE L1 -1 6581 5463 4 1526 12457 114 14 38 chrX 123375541 123378448 -43271848 + L1_Mus1 LINE L1 3742 6565 -2 4 1526 17595 123 11 18 chrX 123378450 123382168 -43268128 + L1_Mus2 LINE L1 2877 6565 -1 4 1526 27 29 0 0 chrX 123382832 123382866 -43267430 + AT_rich Low_complexity Low_complexity 1 34 0 4 1526 789 156 30 84 chrX 123382896 123383099 -43267197 - B2_Mm2 SINE B2 0 195 4 4 1526 432 269 138 0 chrX 123384203 123384363 -43265933 - MTD LTR MaLR -14 405 224 4 1526 6797 118 5 3 chrX 123384640 123385783 -43264513 - L1_Mus4 LINE L1 -80 6556 5412 4 1526 1900 158 3 0 chrX 123385776 123386106 -43264190 + L1_Mur2 LINE L1 3604 3934 -1943 4 1526 2154 347 55 16 chrX 123386117 123387835 -43262461 - Lx8 LINE L1 -234 7239 5414 4 1526 1511 215 9 56 chrX 123387836 123387923 -43262373 - Lx8 LINE L1 -1178 4968 4839 4 1526 642 242 104 82 chrX 123387923 123388143 -43262153 + URR1B DNA MER1_type 1 225 0 4 1526 1511 296 62 35 chrX 123388143 123388559 -43261737 - Lx8 LINE L1 -1025 4855 4425 4 1526 2066 125 41 15 chrX 123388559 123388901 -43261395 + Lx LINE L1 6304 6654 0 4 1526 1238 286 50 29 chrX 123388901 123389283 -43261013 - Lx8 LINE L1 -1456 4424 4027 4 1526 37940 21 2 6 chrX 123389349 123395506 -43254790 - L1Md_A LINE L1 0 6582 457 4 1526 15883 102 11 4 chrX 123395505 123397507 -43252789 - L1_Mm LINE L1 -1900 3983 1968 4 1526 499 24 35 23 chrX 123397507 123397594 -43252702 + (TTTTG)n Simple_repeat Simple_repeat 3 90 0 4 1526 15883 102 11 4 chrX 123397594 123398112 -43252184 - L1_Mm LINE L1 -3916 1967 1446 4 1526 20731 140 10 14 chrX 123398102 123402564 -43247732 + L1_Mus2 LINE L1 2105 6543 -23 4 1526 255 128 0 0 chrX 123402563 123402610 -43247686 + L1_Mur1 LINE L1 3227 3273 -2613 4 1526 562 164 31 15 chrX 123402620 123402750 -43247546 + L1_Mus3 LINE L1 6505 6636 -2 4 1526 207 146 0 0 chrX 123402758 123402799 -43247497 + (GGA)n Simple_repeat Simple_repeat 3 43 0 4 1526 1070 121 0 11 chrX 123402799 123402975 -43247321 + (GAAA)n Simple_repeat Simple_repeat 3 176 0 4 1526 458 230 0 0 chrX 123402982 123403069 -43247227 + PB1D9 SINE Alu 1 87 -33 4 1526 21 57 0 0 chrX 123403195 123403230 -43247066 + AT_rich Low_complexity Low_complexity 1 35 0 4 1526 529 238 60 82 chrX 123403383 123403671 -43246625 - Lx7 LINE L1 -1536 5937 5626 4 1526 466 352 73 6 chrX 123403691 123403868 -43246428 - B3 SINE B2 -7 209 21 4 1526 6569 76 18 8 chrX 123403936 123405178 -43245118 - L1Md_F2 LINE L1 -1 6581 5329 4 1526 432 0 0 0 chrX 123405204 123405252 -43245044 + (T)n Simple_repeat Simple_repeat 1 48 0 4 1526 385 181 12 0 chrX 123405290 123405373 -43244923 - RMER1C Other Other 0 1342 1259 4 1526 1302 191 4 0 chrX 123405507 123405753 -43244543 + Lx2 LINE L1 6744 6990 -7 4 1526 21 0 0 0 chrX 123405771 123405792 -43244504 + AT_rich Low_complexity Low_complexity 1 21 0 4 1526 185 385 104 36 chrX 123406106 123406386 -43243910 + L2 LINE L2 2457 2755 -664 4 1526 966 221 34 8 chrX 123406849 123407114 -43243182 + MYSERV-int LTR ERVK 5505 5776 -774 4 1526 2109 204 56 72 chrX 123407115 123407758 -43242538 + MYSERV6-int LTR ERVK 8271 8903 -56 4 1526 353 270 11 0 chrX 123407835 123407924 -43242372 + RMER4B LTR ERVK 15 104 -481 4 1526 9901 184 25 28 chrX 123407924 123410084 -43240212 - MurERV4-int LTR ERVK -1295 3965 1812 4 1526 4424 12 2 0 chrX 123410084 123410576 -43239720 - MT2_Mm LTR ERVL 0 493 1 4 1526 302 0 0 0 chrX 123410576 123410614 -43239682 - MERVL-int LTR ERVL 0 5485 5448 4 1526 383 167 46 35 chrX 123410614 123410701 -43239595 - ORR1A3-int LTR MaLR -1323 640 553 4 1526 45303 15 6 0 chrX 123410701 123416027 -43234269 - MERVL-int LTR ERVL -125 5360 1 4 1526 4424 12 2 0 chrX 123416027 123416519 -43233777 - MT2_Mm LTR ERVL 0 493 1 4 1526 2778 269 40 19 chrX 123416520 123417132 -43233164 - MurERV4-int LTR ERVK -3445 1815 1180 4 1526 6040 136 19 16 chrX 123417132 123418152 -43232144 - RLTR13D5 LTR ERVK 0 1023 1 4 1526 2778 264 137 13 chrX 123418152 123418547 -43231749 - MurERV4-int LTR ERVK -4081 1179 746 4 1526 271 128 0 0 chrX 123418547 123418586 -43231710 - AmnSINE1 SINE SINE -490 85 47 4 1526 489 216 27 0 chrX 123418551 123418662 -43231634 + B1_Mus2 SINE Alu 28 141 -6 4 1526 477 0 0 0 chrX 123418662 123418715 -43231581 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1526 405 0 0 0 chrX 123418715 123418759 -43231537 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 1526 243 0 0 0 chrX 123418759 123418785 -43231511 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 1526 23 0 0 0 chrX 123418908 123418931 -43231365 + AT_rich Low_complexity Low_complexity 1 23 0 4 1526 982 123 0 7 chrX 123418934 123419073 -43231223 - B1_Mus2 SINE Alu -6 141 4 4 1526 243 0 0 0 chrX 123419122 123419149 -43231147 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1526 411 21 0 0 chrX 123419498 123419546 -43230750 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1526 16313 72 9 5 chrX 123419579 123420477 -43229819 + L1_Mm LINE L1 3307 4196 -1687 4 1526 435 38 0 0 chrX 123420477 123420530 -43229766 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 1526 414 0 0 0 chrX 123420530 123420575 -43229721 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1526 16313 72 9 5 chrX 123420575 123421981 -43228315 + L1_Mm LINE L1 4197 5618 -265 4 1526 2955 112 0 26 chrX 123421981 123422438 -43227858 + L1Md_F2 LINE L1 6134 6578 -4 4 1526 673 76 30 8 chrX 123422439 123422571 -43227725 + (TA)n Simple_repeat Simple_repeat 2 136 0 4 1526 479 288 112 0 chrX 123422576 123422736 -43227560 - MurERV4-int LTR ERVK -4517 743 566 4 1526 29 47 0 0 chrX 123422901 123422944 -43227352 + AT_rich Low_complexity Low_complexity 1 43 0 4 1526 515 291 31 5 chrX 123423200 123423424 -43226872 + Lx7 LINE L1 5058 5287 -593 4 1526 691 372 43 47 chrX 123423439 123424208 -43226088 + Lx8 LINE L1 6534 7299 -174 4 1526 3376 214 19 20 chrX 123424237 123424955 -43225341 + RMER13B LTR ERVK 1 908 0 4 1526 50 65 0 0 chrX 123425022 123425114 -43225182 + AT_rich Low_complexity Low_complexity 1 92 0 4 1526 1310 149 80 4 chrX 123425157 123425406 -43224890 - RMER6C LTR ERVK -2 688 421 4 1526 1469 185 94 43 chrX 123425497 123425826 -43224470 - RLTR19-int LTR ERVK -3183 2954 2606 4 1526 3457 28 2 0 chrX 123425826 123426221 -43224075 - MTA_Mm LTR MaLR 0 396 1 4 1526 1469 185 94 43 chrX 123426221 123426263 -43224033 - RLTR19-int LTR ERVK -3532 2605 2564 4 1526 4909 119 23 4 chrX 123426264 123427055 -43223241 + L1VL2 LINE L1 114 919 -5416 4 1526 1574 223 106 14 chrX 123427054 123427413 -43222883 + Lx6 LINE L1 6378 6781 -679 4 1526 405 0 0 0 chrX 123427413 123427458 -43222838 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 4 1526 1574 223 106 14 chrX 123427458 123427543 -43222753 + Lx6 LINE L1 6782 6863 -597 4 1526 3127 182 49 25 chrX 123427544 123428171 -43222125 - RLTR26 LTR ERVK 0 642 1 4 1526 1437 295 101 11 chrX 123428171 123428723 -43221573 + Lx6 LINE L1 6859 7460 0 4 1526 1315 246 48 13 chrX 123428726 123429187 -43221109 + L1_Mur3 LINE L1 1581 2057 -3823 4 1526 1328 241 56 56 chrX 123429209 123429928 -43220368 + Lx7 LINE L1 5471 6202 -1494 4 1526 328 367 14 28 chrX 123430096 123430239 -43220057 - HAL1-3A_ME LINE L1 -434 2424 2284 4 1526 375 121 0 0 chrX 123430241 123430299 -43219997 + (TTC)n Simple_repeat Simple_repeat 2 59 0 4 1526 2962 43 17 0 chrX 123431334 123431682 -43218614 - IAPEY2_LTR LTR ERVK -3 354 1 4 1526 4681 120 12 121 chrX 123432266 123433063 -43217233 + L1VL2 LINE L1 66 862 -2753 4 1526 687 202 89 0 chrX 123433063 123433231 -43217065 + RMER17B LTR ERVK 776 958 0 4 1526 4681 120 12 121 chrX 123433231 123433612 -43216684 + L1VL2 LINE L1 863 1244 -2371 4 1526 218 288 0 40 chrX 123433613 123433689 -43216607 + CT-rich Low_complexity Low_complexity 2 74 0 4 1526 739 266 85 0 chrX 123434242 123434430 -43215866 - B3 SINE B2 -6 210 7 4 1526 26 82 0 0 chrX 123434531 123434592 -43215704 + AT_rich Low_complexity Low_complexity 1 61 0 4 1526 650 12 0 11 chrX 123434893 123434980 -43215316 - L1Md_T LINE L1 0 6582 6497 4 1526 266 57 0 0 chrX 123435222 123435257 -43215039 - L1_Mus1 LINE L1 -99 6468 6434 4 1526 494 64 39 0 chrX 123435257 123435335 -43214961 + L1Md_F2 LINE L1 6501 6581 -1 5 1526 7132 29 1 0 chrX 123435866 123436687 -43213609 + RLTR13B2 LTR ERVK 1 822 0 5 1526 701 289 92 43 chrX 123436796 123437100 -43213196 + RMER1B Other Other 45 363 -703 5 1526 1516 292 49 18 chrX 123437134 123437939 -43212357 + RMER1A Other Other 1 484 -546 5 1526 1113 88 0 0 chrX 123438404 123438666 -43211630 + (GAAA)n Simple_repeat Simple_repeat 1 262 0 5 1526 911 153 0 0 chrX 123438786 123438923 -43211373 + B1_Mus1 SINE Alu 3 139 -9 5 1526 261 0 0 0 chrX 123438924 123438953 -43211343 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1526 2778 99 73 0 chrX 123439522 123439946 -43210350 - L1_Mus4 LINE L1 -1 6635 6181 5 1526 279 255 53 48 chrX 123443473 123443630 -43206666 - Lx9 LINE L1 -29 7615 7459 5 1526 243 0 0 0 chrX 123443630 123443657 -43206639 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 1526 329 242 63 58 chrX 123443657 123443705 -43206591 - Lx9 LINE L1 -186 7458 7409 5 1526 2998 64 8 2 chrX 123444308 123444702 -43205594 + MTA_Mm LTR MaLR 1 396 0 5 1526 396 198 42 0 chrX 123445933 123446029 -43204267 - Lx6 LINE L1 -3 7457 7358 5 1526 513 291 34 48 chrX 123446095 123446301 -43203995 - B3 SINE B2 -13 203 1 5 1526 1226 162 0 13 chrX 123447240 123447465 -43202831 + Lx LINE L1 6426 6647 -7 5 1526 513 0 0 0 chrX 123447530 123447587 -43202709 + (TA)n Simple_repeat Simple_repeat 1 57 0 5 1526 42 48 0 0 chrX 123447890 123447953 -43202343 + AT_rich Low_complexity Low_complexity 1 63 0 5 1526 235 228 43 0 chrX 123448348 123448440 -43201856 + (TAA)n Simple_repeat Simple_repeat 3 98 0 5 1526 405 0 0 0 chrX 123448752 123448797 -43201499 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 1526 2142 302 32 46 chrX 123450180 123451107 -43199189 - MERVL_2A-int LTR ERVL -115 5646 4733 5 1526 1609 187 61 3 chrX 123451122 123451449 -43198847 - Lx2A1 LINE L1 -4 7004 6659 5 1526 4579 309 45 21 chrX 123451522 123453265 -43197031 - MERVL_2A-int LTR ERVL -1127 4634 2850 5 1526 466 296 112 0 chrX 123453292 123453471 -43196825 - MERVL_2A-int LTR ERVL -3109 2652 2454 5 1526 550 198 26 8 chrX 123453476 123453593 -43196703 - MTC LTR MaLR -190 231 113 5 1526 319 214 215 31 chrX 123453589 123453683 -43196613 - ORR1B1-int LTR MaLR -144 1114 1003 5 1526 569 14 14 0 chrX 123453683 123453753 -43196543 + (CTA)n Simple_repeat Simple_repeat 1 71 0 5 1526 319 214 215 31 chrX 123453753 123453788 -43196508 - ORR1B1-int LTR MaLR -256 1002 962 5 1526 5139 87 21 16 chrX 123453793 123454589 -43195707 - L1VL4 LINE L1 -57 3502 2703 5 1526 9504 52 3 1 chrX 123454593 123456467 -43193829 - L1Md_F2 LINE L1 -1 6581 4701 5 1526 311 188 0 0 chrX 123456468 123456537 -43193759 - L1VL4 LINE L1 -852 2707 2639 5 1526 204 143 0 0 chrX 123456540 123456559 -43193737 + (T)n Simple_repeat Simple_repeat 1 19 0 5 1526 264 30 0 0 chrX 123456559 123456592 -43193704 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1526 204 143 0 0 chrX 123456592 123456621 -43193675 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1526 11950 103 16 11 chrX 123456621 123459238 -43191058 - L1VL4 LINE L1 -912 2647 21 5 1526 261 130 22 0 chrX 123459239 123459285 -43191011 - MusHAL1 LINE L1 -3114 240 194 5 1526 576 311 16 9 chrX 123459294 123459470 -43190826 - B3 SINE B2 -22 171 1 5 1526 1561 209 75 8 chrX 123459699 123460052 -43190244 - ORR1B1-int LTR MaLR -293 965 481 5 1526 1526 195 36 3 chrX 123460052 123460355 -43189941 + ORR1A2 LTR MaLR 1 313 -14 5 1526 1852 226 3 13 chrX 123460356 123460732 -43189564 + Lx3C LINE L1 6439 6810 -166 5 1526 3992 139 39 18 chrX 123461024 123461743 -43188553 - RMER17A2 LTR ERVK 0 906 173 5 1526 5545 92 4 5 chrX 123461747 123462765 -43187531 - L1_Mus1 LINE L1 -480 6087 5071 5 1526 2479 148 40 6 chrX 123462772 123463241 -43187055 + MYSERV16_I-int LTR ERVK 1226 1710 -616 5 1526 3012 107 20 7 chrX 123463241 123463701 -43186595 + L1_Mus1 LINE L1 6101 6566 -1 5 1526 853 113 7 0 chrX 123463710 123463851 -43186445 - MYSERV16_I-int LTR ERVK -1112 1214 1073 5 1526 7901 45 1 0 chrX 123463866 123464838 -43185458 + L1Md_F2 LINE L1 4613 5585 -298 5 1526 7795 55 1 11 chrX 123464839 123465840 -43184456 + L1Md_F2 LINE L1 5587 6577 -5 5 1526 3750 299 38 33 chrX 123465847 123467470 -43182826 + RNERVK23-int LTR ERVK 6189 7819 -398 5 1526 320 101 0 42 chrX 123467734 123467806 -43182490 + (A)n Simple_repeat Simple_repeat 1 69 0 5 1526 413 295 33 50 chrX 123468320 123468502 -43181794 + RNLTR23 LTR ERVK 464 642 0 5 1526 483 197 197 0 chrX 123468502 123468644 -43181652 + Lx3C LINE L1 6805 6974 -2 5 1526 362 127 0 0 chrX 123468654 123468709 -43181587 + ORR1B1 LTR MaLR 340 394 0 5 1526 1964 230 68 2 chrX 123468709 123469175 -43181121 - ORR1B1-int LTR MaLR -759 499 3 5 1526 940 182 48 0 chrX 123469176 123469363 -43180933 - ORR1B1 LTR MaLR -1 393 198 5 1526 1209 236 15 23 chrX 123469354 123469619 -43180677 + ORR1B1 LTR MaLR 113 375 -19 5 190 1594 222 53 16 chrX 123469627 123470003 -43180293 - MTC LTR MaLR -26 395 6 5 1527 507 281 43 157 chrX 123470133 123470457 -43179839 - RLTR12B LTR ERVK -190 338 52 5 1527 1135 40 60 0 chrX 123470457 123470607 -43179689 + B2_Mm1t SINE B2 2 160 -33 5 1527 504 0 0 0 chrX 123470607 123470663 -43179633 + (TAAA)n Simple_repeat Simple_repeat 3 58 0 5 1527 372 295 26 39 chrX 123470704 123470859 -43179437 - MERVL_2A-int LTR ERVL -3568 2193 2041 5 1527 986 308 83 6 chrX 123470948 123471284 -43179012 - ORR1D1 LTR MaLR -12 362 1 5 1527 245 29 29 0 chrX 123472084 123472118 -43178178 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 1527 757 243 26 36 chrX 123472662 123472854 -43177442 - RMER12 LTR ERVK -10 1312 1123 5 1527 1171 75 0 0 chrX 123472940 123473087 -43177209 + B1_Mus1 SINE Alu 2 148 0 5 1527 390 21 0 0 chrX 123473087 123473134 -43177162 + (CATA)n Simple_repeat Simple_repeat 2 48 0 5 1527 285 75 0 0 chrX 123473170 123473210 -43177086 + (CAAAA)n Simple_repeat Simple_repeat 3 42 0 5 1527 15188 143 18 13 chrX 123473292 123476248 -43174048 - Lx3B LINE L1 -81 6892 3939 5 1527 1089 108 0 0 chrX 123476248 123476396 -43173900 - B1_Mus1 SINE Alu 0 148 1 5 1527 15188 137 18 14 chrX 123476396 123477072 -43173224 - Lx3B LINE L1 -1948 3938 3249 5 1527 4997 163 33 5 chrX 123477069 123478021 -43172275 - L1_Mus3 LINE L1 -6 6632 5619 5 1527 704 108 22 44 chrX 123478022 123478158 -43172138 + L1_Mus1 LINE L1 6435 6567 0 5 1527 3171 104 9 11 chrX 123478160 123478616 -43171680 + L1_Mm LINE L1 5296 5750 -133 5 1527 6536 214 16 127 chrX 123478612 123479124 -43171172 - Lx3B LINE L1 -2623 3254 2810 5 1527 531 45 0 0 chrX 123479124 123479190 -43171106 + (TTCC)n Simple_repeat Simple_repeat 1 66 0 5 1527 8472 152 21 38 chrX 123479190 123480776 -43169520 - Lx3B LINE L1 -3069 2817 1392 5 1527 762 69 0 0 chrX 123480776 123480877 -43169419 + (TCC)n Simple_repeat Simple_repeat 3 103 0 5 1527 1133 68 14 0 chrX 123480887 123481033 -43169263 - B1_Mus1 SINE Alu 0 148 1 5 1527 8472 149 47 21 chrX 123481033 123481350 -43168946 - Lx3B LINE L1 -4495 1391 1086 5 1527 6975 101 30 8 chrX 123481350 123482361 -43167935 - RLTR13D4 LTR ERVK 0 1033 1 5 1527 3939 157 87 10 chrX 123482361 123482867 -43167429 - Lx3B LINE L1 -5899 1085 518 5 1527 513 327 22 41 chrX 123482867 123483135 -43167161 - Lx3B LINE L1 -6719 265 3 5 1527 1583 226 58 3 chrX 123483137 123483448 -43166848 - RLTR21 LTR ERVK -1244 328 1 5 1527 1685 203 52 10 chrX 123483465 123483873 -43166423 - L1_Mur3 LINE L1 -317 5563 5139 5 1527 1526 291 29 33 chrX 123483879 123484362 -43165934 + Lx6 LINE L1 5969 6449 -1011 5 1527 196 111 44 0 chrX 123484365 123484410 -43165886 + T-rich Low_complexity Low_complexity 1 47 0 5 1527 390 172 30 0 chrX 123484426 123484525 -43165771 + GA-rich Low_complexity Low_complexity 1 102 0 5 1527 300 226 34 7 chrX 123484530 123484651 -43165645 + Lx6 LINE L1 6487 6685 -1011 5 1527 768 289 18 50 chrX 123485802 123486024 -43164272 - B3 SINE B2 -1 215 1 5 1527 267 79 0 0 chrX 123486573 123486611 -43163685 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1527 1876 294 37 10 chrX 123488113 123488970 -43161326 + RMER1B Other Other 2 566 -464 5 1527 29275 98 11 30 chrX 123490432 123495648 -43154648 + L1Md_F2 LINE L1 474 5586 -297 5 1527 6757 103 6 16 chrX 123495648 123496643 -43153653 + L1Md_F2 LINE L1 5587 6571 -11 5 1527 227 204 0 0 chrX 123497253 123497302 -43152994 + T-rich Low_complexity Low_complexity 5 53 0 5 1527 769 326 76 53 chrX 123497618 123498104 -43152192 + RMER5 LTR ERV1 1 497 -37 5 1527 25 51 0 0 chrX 123498227 123498266 -43152030 + AT_rich Low_complexity Low_complexity 1 39 0 5 1527 2179 241 25 27 chrX 123498266 123498779 -43151517 - RMER20A LTR ERVK 0 516 5 5 1527 722 245 62 6 chrX 123498820 123498980 -43151316 - B3 SINE B2 -6 210 42 5 1527 274 204 149 37 chrX 123499225 123499332 -43150964 - RMER5 LTR ERV1 -134 400 282 5 1527 461 242 74 8 chrX 123499879 123499897 -43150399 + B4 SINE B4 66 194 -98 5 1527 728 97 0 0 chrX 123499897 123500000 -43150296 + B1_Mus1 SINE Alu 2 104 -44 5 1527 292 56 0 0 chrX 123500000 123500036 -43150260 + B1_Mm SINE Alu 104 139 -8 1 1527 26 30 0 0 chrX 123500067 123500100 -43150196 + AT_rich Low_complexity Low_complexity 1 33 0 2 1527 207 0 0 0 chrX 123500260 123500283 -43150013 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1527 1146 95 0 0 chrX 123500893 123501040 -43149256 + B1_Mus2 SINE Alu 1 147 0 4 1527 212 59 29 0 chrX 123501068 123501102 -43149194 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 5 1527 381 131 0 0 chrX 123501972 123502033 -43148263 + (TCC)n Simple_repeat Simple_repeat 3 63 0 6 1527 232 265 78 48 chrX 123502643 123502746 -43147550 - Lx6 LINE L1 -1371 6089 5984 7 1527 2921 108 8 0 chrX 123503172 123503569 -43146727 - MTB LTR MaLR 0 400 1 8 1527 486 46 0 0 chrX 123504929 123504994 -43145302 + (TTTTG)n Simple_repeat Simple_repeat 2 66 0 9 1527 509 80 13 0 chrX 123505127 123505202 -43145094 + (GA)n Simple_repeat Simple_repeat 2 77 0 1 1527 604 120 11 0 chrX 123505893 123505985 -43144311 - RMER19B LTR ERVK -13 889 797 1 1527 336 304 34 75 chrX 123506243 123506389 -43143907 - ID_B1 SINE B4 -4 220 81 1 1527 1240 81 0 0 chrX 123506620 123506768 -43143528 - B1_Mus1 SINE Alu 0 148 1 1 1527 3232 139 32 15 chrX 123506919 123507446 -43142850 + RMER2 LTR ERV1 1 536 -31 1 1527 1538 167 76 3 chrX 123507898 123508193 -43142103 - IAPEY3_LTR LTR ERVK -7 468 14 1 1527 2476 70 129 11 chrX 123508365 123508714 -43141582 - RLTR10 LTR ERVK 0 390 1 1 1527 2375 171 11 50 chrX 123509351 123509808 -43140488 + MT2C_Mm LTR ERVL 1 439 -36 1 1527 2310 128 3 6 chrX 123509821 123510181 -43140115 - L1_Mur2 LINE L1 -1651 4226 3868 1 1527 189 0 0 0 chrX 123510185 123510206 -43140090 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 1527 257 302 26 65 chrX 123511349 123511506 -43138790 - L1MA9 LINE L1 -7 6305 6149 2 1527 7930 42 1 0 chrX 123511571 123512515 -43137781 - L1Md_F2 LINE L1 -12 6570 5626 2 1527 13528 155 192 26 chrX 123512659 123516231 -43134065 - L1_Mus1 LINE L1 -2 6565 2158 2 1527 1976 92 0 0 chrX 123516231 123516482 -43133814 - L1_Mus1 LINE L1 -1 6566 6316 2 1527 13528 178 261 36 chrX 123516482 123517232 -43133064 - L1_Mus1 LINE L1 -3726 2157 1381 2 1527 3035 38 9 0 chrX 123517232 123517575 -43132721 + ORR1A0 LTR MaLR 1 346 0 2 1527 13528 151 122 8 chrX 123517575 123517783 -43132513 - L1_Mus1 LINE L1 -4503 1380 1157 2 1527 347 271 49 28 chrX 123518020 123518164 -43132132 - Lx4B LINE L1 0 7058 6912 2 1527 828 46 0 0 chrX 123518203 123518312 -43131984 + (GTTTG)n Simple_repeat Simple_repeat 2 110 0 2 1527 771 85 0 19 chrX 123518312 123518410 -43131886 - B1_Mm SINE Alu -8 139 42 2 1527 258 229 55 78 chrX 123518326 123518454 -43131842 - RLTR25B LTR ERVK -507 521 397 2 1527 382 83 0 62 chrX 123518528 123518592 -43131704 - B1_Mus1 SINE Alu -88 60 1 2 1527 6466 190 42 18 chrX 123518594 123519960 -43130336 - Lx4B LINE L1 -136 6922 5509 2 1527 194 0 39 0 chrX 123520053 123520079 -43130217 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1527 8413 39 1 1 chrX 123520113 123521335 -43128961 - L1Md_F2 LINE L1 -3 6579 5357 3 1527 180 77 0 0 chrX 123521370 123521396 -43128900 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 3 1527 995 288 100 8 chrX 123521491 123521852 -43128444 + MTD LTR MaLR 5 398 -21 3 1527 29860 32 0 2 chrX 123522037 123526253 -43124043 - L1Md_T LINE L1 -1 6581 2375 3 1527 2546 166 7 20 chrX 123526377 123526820 -43123476 + RLTR21 LTR ERVK 1 437 -1135 3 1527 7269 114 7 13 chrX 123526821 123528190 -43122106 + Lx3B LINE L1 4804 6159 -814 3 1527 2565 181 31 11 chrX 123528190 123528647 -43121649 + Lx3B LINE L1 6507 6972 -9 3 1527 288 0 0 0 chrX 123528651 123528683 -43121613 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 3 1527 3439 169 18 8 chrX 123528683 123529334 -43120962 + RLTR21 LTR ERVK 436 1093 -479 3 1527 556 191 9 54 chrX 123529340 123529451 -43120845 + RLTR21 LTR ERVK 1466 1571 -1 3 1527 360 340 0 20 chrX 123529525 123529624 -43120672 + PB1D10 SINE Alu 13 109 -8 3 1527 551 15 15 0 chrX 123529746 123529814 -43120482 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 1527 3117 43 0 0 chrX 123529862 123530208 -43120088 - ORR1A0 LTR MaLR 0 346 1 4 1527 6367 60 10 1 chrX 123530208 123531031 -43119265 - ORR1A0-int LTR MaLR 0 1792 963 4 1527 1951 163 10 0 chrX 123531031 123531337 -43118959 + RLTR27 LTR ERVK 1 309 0 4 1527 287 196 0 0 chrX 123531371 123531417 -43118879 + MMERVK10C-int LTR ERVK 222 267 -7314 4 1527 783 98 0 0 chrX 123531433 123531535 -43118761 + IAP-d-int LTR ERVK 54 155 -6387 4 1527 323 91 0 0 chrX 123531535 123531579 -43118717 + IAP-d-int LTR ERVK 106 149 -6393 4 1527 825 333 30 36 chrX 123532174 123532804 -43117492 + MMERVK10C-int LTR ERVK 6436 7061 -520 4 1527 1158 148 0 0 chrX 123532948 123533130 -43117166 + MMERVK10C-int LTR ERVK 7390 7571 -10 4 1527 725 189 0 29 chrX 123533132 123533268 -43117028 + RLTR27 LTR ERVK 178 309 0 4 1527 6986 65 10 0 chrX 123533268 123534226 -43116070 - ORR1A0-int LTR MaLR -824 968 1 4 1527 2494 65 0 0 chrX 123534226 123534551 -43115745 - ORR1A0 LTR MaLR 0 346 22 4 1527 22 0 0 0 chrX 123534905 123534927 -43115369 + AT_rich Low_complexity Low_complexity 1 22 0 4 1527 2424 151 38 29 chrX 123535247 123535664 -43114632 - Lx LINE L1 -2 6652 6232 4 1527 406 119 15 0 chrX 123535665 123535732 -43114564 + L1_Mm LINE L1 3929 3996 -1887 4 1527 4716 12 0 2 chrX 123535732 123536226 -43114070 + MT2_Mm LTR ERVL 1 493 0 5 1527 48609 17 0 0 chrX 123536226 123541591 -43108705 + MERVL-int LTR ERVL 1 5365 -120 5 1527 381 164 12 37 chrX 123541591 123541673 -43108623 + ORR1A3-int LTR MaLR 561 640 -1323 5 1527 322 0 0 0 chrX 123541673 123541711 -43108585 + MERVL-int LTR ERVL 5448 5485 0 5 1527 2780 9 0 0 chrX 123541711 123542030 -43108266 + MT2_Mm LTR ERVL 1 319 -174 5 1527 2424 151 38 29 chrX 123542042 123542459 -43107837 - Lx LINE L1 -2 6652 6232 5 1527 7644 173 12 16 chrX 123542460 123542527 -43107769 + L1_Mm LINE L1 3929 3992 -1891 4 1527 4716 12 0 2 chrX 123542527 123543021 -43107275 + MT2_Mm LTR ERVL 1 493 0 5 1527 7644 173 12 16 chrX 123543021 123544396 -43105900 + L1_Mm LINE L1 3993 5365 -518 4 1527 1513 220 21 21 chrX 123544500 123544881 -43105415 + L1_Mur3 LINE L1 4891 5271 -609 5 1527 21570 155 13 41 chrX 123544960 123549606 -43100690 + L1Md_F LINE L1 261 4627 -1256 5 1527 4657 110 0 3 chrX 123549606 123550217 -43100079 + L1_Mus1 LINE L1 5956 6564 -3 5 1527 2182 250 24 29 chrX 123550247 123550319 -43099977 + Lx6 LINE L1 5255 5326 -554 5 1527 1415 113 5 14 chrX 123550319 123550534 -43099762 - L1Md_F2 LINE L1 0 6582 6370 5 1527 3378 242 40 78 chrX 123550534 123551878 -43098418 + Lx6 LINE L1 5327 6629 -831 5 1527 1822 188 41 38 chrX 123551887 123552253 -43098043 - ORR1B2 LTR MaLR 0 367 1 5 1527 2089 139 13 24 chrX 123552253 123552628 -43097668 - ORR1B2-int LTR MaLR 0 1509 1139 5 1527 1894 143 244 30 chrX 123552739 123553206 -43097090 + RLTR6_Mm LTR ERV1 37 603 -51 6 1527 47635 32 13 5 chrX 123553207 123560928 -43089368 + RLTR6-int LTR ERV1 1 7778 0 6 1527 1817 138 255 29 chrX 123561041 123561488 -43088808 + RLTR6_Mm LTR ERV1 37 584 -70 6 1527 2830 231 99 19 chrX 123561482 123562326 -43087970 - ORR1B2-int LTR MaLR -359 1150 239 5 1527 2451 44 0 0 chrX 123562326 123562621 -43087675 - L1_Mus1 LINE L1 -680 5887 5593 6 1527 531 260 7 32 chrX 123562619 123562774 -43087522 + Lx3A LINE L1 6822 6972 -9 6 1527 213 39 0 0 chrX 123562783 123562809 -43087487 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 6 1527 2720 175 8 0 chrX 123562809 123563301 -43086995 + RLTR21 LTR ERVK 436 931 -641 6 1527 303 277 20 10 chrX 123563372 123563474 -43086822 - L1VL1 LINE L1 -6037 385 283 6 1527 561 84 0 0 chrX 123563584 123563655 -43086641 - tRNA-Met-i tRNA tRNA -4 71 1 6 1527 428 269 75 35 chrX 123563659 123563832 -43086464 - Lx7 LINE L1 -1905 5791 5612 6 1527 486 307 66 50 chrX 123564102 123564409 -43085887 - MTEb LTR MaLR 0 379 1 6 1527 5888 105 79 38 chrX 123564602 123565562 -43084734 + L1_Mus3 LINE L1 5639 6638 0 7 1527 189 0 0 0 chrX 123565723 123565744 -43084552 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1527 1017 145 5 45 chrX 123566052 123566254 -43084042 - Lx LINE L1 -7 6647 6454 7 1527 1030 126 0 0 chrX 123566256 123566430 -43083866 + L1VL1 LINE L1 894 1067 -5355 7 1527 25908 123 17 23 chrX 123566425 123571591 -43078705 + L1_Mus2 LINE L1 1432 6562 -4 7 1527 235 281 60 12 chrX 123571607 123571690 -43078606 + RMER16 LTR ERVK 266 352 -181 7 1527 326 259 109 18 chrX 123571745 123571855 -43078441 - MTD LTR MaLR -299 120 1 7 1527 22 0 0 0 chrX 123572240 123572262 -43078034 + AT_rich Low_complexity Low_complexity 1 22 0 7 1527 476 309 50 27 chrX 123572540 123572877 -43077419 - L1_Mm LINE L1 -474 5817 5444 7 1527 26 30 0 0 chrX 123573039 123573072 -43077224 + AT_rich Low_complexity Low_complexity 1 33 0 7 1527 308 403 0 0 chrX 123573634 123573753 -43076543 - MTEa-int LTR MaLR -1458 122 4 8 1527 418 349 106 40 chrX 123573765 123574114 -43076182 - MTEa LTR MaLR -4 375 4 8 1527 276 395 0 27 chrX 123575658 123575770 -43074526 - ID_B1 SINE B4 -20 204 96 8 1527 26 50 0 0 chrX 123575880 123575920 -43074376 + AT_rich Low_complexity Low_complexity 1 40 0 8 1527 424 368 67 24 chrX 123576529 123576732 -43073564 + ID_B1 SINE B4 2 214 -10 8 1527 240 35 0 0 chrX 123576732 123576761 -43073535 + (CAT)n Simple_repeat Simple_repeat 1 29 0 8 1527 243 0 0 0 chrX 123576974 123577001 -43073295 + (T)n Simple_repeat Simple_repeat 1 27 0 8 1527 8495 19 0 0 chrX 123577824 123579506 -43070790 - L1Md_T LINE L1 0 6582 4915 8 1527 3096 30 0 0 chrX 123579582 123579945 -43070351 + L1Md_F3 LINE L1 6211 6573 -11 8 1527 1308 239 62 9 chrX 123580152 123580490 -43069806 + RLTR20B3 LTR ERVK 1 356 -221 8 1527 219 227 0 0 chrX 123581929 123581995 -43068301 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 8 1527 221 0 0 33 chrX 123582288 123582318 -43067978 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 9 1527 861 10 0 0 chrX 123582420 123582518 -43067778 + (TTC)n Simple_repeat Simple_repeat 3 100 0 9 1527 25813 145 14 31 chrX 123582963 123588545 -43061751 - L1_Mus2 LINE L1 -351 6215 734 9 1527 451 278 156 0 chrX 123588550 123588730 -43061566 - L1_Mus2 LINE L1 -5800 816 609 9 1527 378 265 123 159 chrX 123588813 123589114 -43061182 - L1VL1 LINE L1 -6104 318 29 9 1527 207 69 0 0 chrX 123589173 123589202 -43061094 + (CATA)n Simple_repeat Simple_repeat 4 32 0 9 1527 1137 61 0 39 chrX 123589215 123589354 -43060942 + B1_Mm SINE Alu 1 139 -8 9 1527 261 0 0 0 chrX 123589354 123589383 -43060913 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9 1527 1137 61 0 39 chrX 123589383 123589396 -43060900 + B1_Mm SINE Alu 140 147 0 9 1527 27 29 0 0 chrX 123589489 123589523 -43060773 + AT_rich Low_complexity Low_complexity 1 34 0 9 1527 446 277 21 78 chrX 123589649 123589841 -43060455 + B3A SINE B2 2 182 -16 9 1527 629 139 0 53 chrX 123590228 123590418 -43059878 + (TA)n Simple_repeat Simple_repeat 1 180 0 9 1527 22 0 0 0 chrX 123590945 123590967 -43059329 + AT_rich Low_complexity Low_complexity 1 22 0 1 1527 33 43 0 0 chrX 123592412 123592459 -43057837 + AT_rich Low_complexity Low_complexity 1 47 0 1 1527 1996 150 59 3 chrX 123592865 123593240 -43057056 + Lx2 LINE L1 6600 6995 -2 1 1527 186 43 0 0 chrX 123593240 123593263 -43057033 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 1 1527 30 0 0 44 chrX 123593292 123593314 -43056982 + AT_rich Low_complexity Low_complexity 1 22 0 1 1527 482 296 62 33 chrX 123593314 123593524 -43056772 - B3 SINE B2 0 216 1 1 1527 30 0 0 44 chrX 123593524 123593546 -43056750 + AT_rich Low_complexity Low_complexity 1 21 0 1 1527 207 0 0 0 chrX 123599169 123599192 -43051104 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 1 1527 1149 123 0 0 chrX 123599192 123599370 -43050926 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 1527 519 17 0 0 chrX 123599372 123599432 -43050864 + (GAAA)n Simple_repeat Simple_repeat 1 60 0 1 190 5347 112 0 2 chrX 123600076 123600902 -43049394 - L1VL4 LINE L1 -2526 1033 210 1 1528 288 125 21 0 chrX 123600900 123600948 -43049348 - L1VL4 LINE L1 -5857 445 397 1 1528 3643 200 60 45 chrX 123600946 123602319 -43047977 - L1_Mur1 LINE L1 -4324 1562 3 1 1528 286 300 63 91 chrX 123602368 123602384 -43047912 + B4 SINE B4 81 108 -184 1 1528 326 253 24 0 chrX 123602384 123602396 -43047900 + PB1D9 SINE Alu 14 25 -95 1 1528 533 15 15 0 chrX 123602396 123602462 -43047834 + (TTTTG)n Simple_repeat Simple_repeat 4 70 0 1 1528 286 300 63 91 chrX 123602462 123602576 -43047720 + B4 SINE B4 109 218 -74 1 1528 642 320 121 15 chrX 123602919 123603752 -43046544 - L1MA6 LINE L1 -24 6276 5354 1 1528 23 0 0 0 chrX 123603757 123603780 -43046516 + AT_rich Low_complexity Low_complexity 1 23 0 1 1528 355 362 45 22 chrX 123603995 123604173 -43046123 - L1MA6 LINE L1 -1029 5114 4933 1 1528 405 320 50 50 chrX 123604193 123604413 -43045883 - MLT-int LTR MaLR -1290 445 226 1 1528 418 323 54 57 chrX 123604437 123604716 -43045580 + RLTR16 LTR ERVK 1 278 -227 1 1528 475 341 11 65 chrX 123605339 123605524 -43044772 + ORR1E LTR MaLR 6 180 -179 1 1528 302 258 0 0 chrX 123606094 123606160 -43044136 - B3 SINE B2 -9 207 142 1 1528 274 194 0 88 chrX 123606136 123606204 -43044092 + B3 SINE B2 148 209 -7 1 1528 342 289 97 0 chrX 123606212 123606326 -43043970 + Lx9 LINE L1 6534 6658 -986 1 1528 1078 217 0 0 chrX 123606327 123606539 -43043757 - ORR1A4 LTR MaLR 0 329 118 1 1528 474 49 0 0 chrX 123606694 123606755 -43043541 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 1528 672 205 58 69 chrX 123607208 123607447 -43042849 - ORR1B1 LTR MaLR -140 254 20 1 1528 570 255 7 7 chrX 123607472 123607614 -43042682 + Lx9 LINE L1 6698 6839 -805 1 1528 448 252 83 72 chrX 123607632 123607910 -43042386 + Lx9 LINE L1 7343 7623 -21 1 1528 39 60 0 0 chrX 123607912 123607979 -43042317 + AT_rich Low_complexity Low_complexity 1 67 0 1 1528 363 23 0 0 chrX 123608501 123608545 -43041751 + (TC)n Simple_repeat Simple_repeat 2 45 0 1 1528 425 392 0 0 chrX 123608545 123608688 -43041608 - B3A SINE B2 -47 151 9 1 1528 369 291 68 31 chrX 123608937 123609100 -43041196 - MLT1D LTR MaLR -336 169 1 1 1528 551 322 43 28 chrX 123609142 123609353 -43040943 - B3 SINE B2 0 216 3 1 1528 243 0 0 0 chrX 123609430 123609457 -43040839 + (TTA)n Simple_repeat Simple_repeat 3 29 0 1 1528 7885 142 42 20 chrX 123609538 123609555 -43040741 - Lx3A LINE L1 0 6981 6967 1 1528 528 59 0 0 chrX 123609555 123609623 -43040673 + (TTTA)n Simple_repeat Simple_repeat 1 68 0 1 1528 11547 133 32 15 chrX 123609623 123611377 -43038919 - Lx3A LINE L1 -15 6966 5192 1 1528 216 0 0 0 chrX 123611377 123611401 -43038895 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1528 14577 122 14 78 chrX 123611401 123612554 -43037742 - Lx3A LINE L1 -695 5191 4046 1 1528 1037 108 0 0 chrX 123612560 123612699 -43037597 - B1_Mus1 SINE Alu -7 141 3 1 1528 518 217 82 101 chrX 123612699 123612713 -43037583 - B4 SINE B4 -67 187 70 1 1528 14577 122 14 78 chrX 123612713 123613380 -43036916 - Lx3A LINE L1 -695 4045 3381 1 1528 3880 139 123 16 chrX 123613380 123613793 -43036503 - RMER17D2 LTR ERVK 0 809 362 1 1528 1180 33 7 7 chrX 123613793 123613947 -43036349 + (GGAGA)n Simple_repeat Simple_repeat 2 155 0 1 1528 3880 139 123 16 chrX 123613947 123614264 -43036032 - RMER17D2 LTR ERVK -448 361 1 1 1528 14577 122 14 78 chrX 123614264 123614333 -43035963 - Lx3A LINE L1 -2506 3380 3312 1 1528 306 0 0 0 chrX 123614333 123614367 -43035929 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 1 1528 7253 97 7 6 chrX 123614380 123615951 -43034345 - L1_Mus1 LINE L1 -5 6562 4987 1 1528 2315 215 101 12 chrX 123615955 123616561 -43033735 - Lx3A LINE L1 -6321 663 4 1 1528 546 274 65 5 chrX 123616786 123617002 -43033294 - Lx7 LINE L1 -228 7468 7240 1 1528 286 74 37 0 chrX 123617035 123617089 -43033207 + (TTTG)n Simple_repeat Simple_repeat 3 58 0 1 1528 1109 62 7 0 chrX 123617089 123617234 -43033062 - B1_Mm SINE Alu 0 147 2 1 1528 911 159 112 0 chrX 123617236 123617406 -43032890 - L1_Mur1 LINE L1 -1235 4651 4463 1 1528 2557 169 32 56 chrX 123617391 123617949 -43032347 - L1VL4 LINE L1 -5352 950 406 1 1528 3783 208 22 80 chrX 123618086 123619099 -43031197 + RMER17C-int LTR ERVK 1112 2065 -1173 1 1528 870 168 32 48 chrX 123619283 123619471 -43030825 + RMER17C-int LTR ERVK 2050 2234 -1004 1 1528 278 216 116 55 chrX 123619463 123619644 -43030652 + RMER17C-int LTR ERVK 3193 3384 -2753 1 1528 3934 181 49 55 chrX 123619631 123620743 -43029553 + RMER17C-int LTR ERVK 2223 3238 0 1 1528 504 261 49 100 chrX 123620743 123620825 -43029471 + RMER17C LTR ERVK 1 76 -334 1 1528 837 30 0 0 chrX 123620825 123620925 -43029371 + (TTC)n Simple_repeat Simple_repeat 3 102 0 1 1528 504 261 49 100 chrX 123620925 123621212 -43029084 + RMER17C LTR ERVK 77 351 -59 1 1528 912 382 32 65 chrX 123621246 123621781 -43028515 - MTE-int LTR MaLR -381 1199 683 1 1528 7478 149 13 15 chrX 123621782 123623191 -43027105 - Lx LINE L1 0 6654 5242 1 1528 5944 93 5 14 chrX 123623191 123624048 -43026248 - L1_Mus3 LINE L1 -3 6635 5787 1 1528 7478 198 23 8 chrX 123624048 123624953 -43025343 - Lx LINE L1 -642 5241 4333 1 1528 11550 102 35 9 chrX 123624966 123625103 -43025193 - RLTR22_Mus LTR ERVK 0 1808 1665 1 1528 5563 93 20 21 chrX 123625103 123625912 -43024384 + RLTR13C2 LTR ERVK 1 808 0 1 1528 11550 102 35 9 chrX 123625912 123627534 -43022762 - RLTR22_Mus LTR ERVK -144 1664 3 1 1528 333 158 0 0 chrX 123627536 123627593 -43022703 - Lx LINE L1 -1562 4321 4265 1 1528 473 86 13 8 chrX 123627597 123627681 -43022615 - ETnERV2-int LTR ERVK -27 7379 7326 1 1528 1795 159 37 37 chrX 123627686 123628094 -43022202 - RLTR13B1 LTR ERVK -461 441 1 1 1528 1642 132 4 4 chrX 123628107 123628357 -43021939 - ETnERV3-int LTR ERVK -30 5778 5529 1 1528 354 88 0 66 chrX 123628370 123628431 -43021865 - RLTR45-int LTR ERVK -1172 6072 6016 1 1528 3969 191 34 48 chrX 123628530 123630538 -43019758 - ETnERV2-int LTR ERVK -3323 4083 2356 1 1528 1458 193 46 40 chrX 123630554 123631022 -43019274 - ETnERV2-int LTR ERVK -4419 2987 2428 1 1528 4180 196 33 95 chrX 123631028 123632266 -43018030 - MMETn-int LTR ERVK -3682 1162 2 1 1528 1801 162 57 82 chrX 123632268 123632671 -43017625 - RLTR9C LTR ERVK 0 393 1 1 1528 14978 178 10 17 chrX 123632671 123635456 -43014840 - Lx LINE L1 -1613 4270 1503 1 1528 1034 116 7 0 chrX 123635456 123635602 -43014694 - B1_Mus1 SINE Alu -1 147 1 1 1528 14978 143 4 16 chrX 123635602 123636293 -43014003 - Lx LINE L1 -4381 1502 821 1 1528 338 282 8 25 chrX 123636414 123636534 -43013762 - Lx LINE L1 -5790 867 750 1 1528 276 100 0 0 chrX 123636791 123636831 -43013465 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 1528 2075 223 38 12 chrX 123637063 123637563 -43012733 + L1_Mur3 LINE L1 440 952 -6760 1 1528 316 309 35 82 chrX 123637668 123637950 -43012346 - RMER17C LTR ERVK -65 345 77 1 1528 229 89 44 0 chrX 123637950 123637995 -43012301 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 1528 605 236 97 0 chrX 123638108 123638252 -43012044 - ORR1D1 LTR MaLR -216 158 1 1 1528 1683 195 75 3 chrX 123638347 123638681 -43011615 - ORR1B2 LTR MaLR -8 359 2 1 1528 2409 190 112 4 chrX 123638674 123639208 -43011088 - ORR1B2-int LTR MaLR -2 1507 916 1 1528 4247 129 26 42 chrX 123639258 123640018 -43010278 - RMER17A LTR ERVK -3 748 1 1 1528 1129 82 0 0 chrX 123640369 123640515 -43009781 + B1_Mus2 SINE Alu 2 147 0 1 1528 1021 99 35 0 chrX 123640546 123640688 -43009608 + B1_Mm SINE Alu 1 147 0 1 1528 234 0 0 0 chrX 123640688 123640714 -43009582 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1528 22 0 0 0 chrX 123640792 123640814 -43009482 + AT_rich Low_complexity Low_complexity 1 22 0 1 1528 23 33 0 0 chrX 123642299 123642329 -43007967 + AT_rich Low_complexity Low_complexity 1 30 0 1 1528 20666 202 18 12 chrX 123642466 123643613 -43006683 - L1VL2 LINE L1 -107 5779 4631 1 1528 186 43 0 0 chrX 123643613 123643636 -43006660 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 1528 20666 202 18 12 chrX 123643636 123644794 -43005502 - L1VL2 LINE L1 -1256 4630 3489 1 1528 180 0 0 0 chrX 123644794 123644814 -43005482 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 1528 20666 213 31 18 chrX 123644814 123648189 -43002107 - L1VL2 LINE L1 -2398 3488 308 1 1528 428 336 22 29 chrX 123648278 123648416 -43001880 + B3 SINE B2 4 140 -76 1 1528 253 139 0 0 chrX 123648977 123649020 -43001276 + MusHAL1 LINE L1 366 408 -2304 1 1528 186 143 0 0 chrX 123650203 123650238 -43000058 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1528 1945 100 43 3 chrX 123651992 123652292 -42998004 - L1_Mus3 LINE L1 -8 6630 6319 1 1528 6525 163 15 7 chrX 123652575 123654112 -42996184 - Lx LINE L1 -2 6652 5103 1 1528 3431 102 49 0 chrX 123654138 123654630 -42995666 - L1_Mus1 LINE L1 0 6567 6052 1 1528 459 0 0 0 chrX 123654660 123654711 -42995585 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1 1528 187 95 0 67 chrX 123654794 123654839 -42995457 + A-rich Low_complexity Low_complexity 4 45 0 1 1528 7455 131 1 7 chrX 123654853 123656220 -42994076 - L1_Mus1 LINE L1 -511 6055 4701 1 1528 13095 126 6 1 chrX 123656225 123658308 -42991988 + L1_Mus1 LINE L1 2589 4683 -1200 1 1528 852 200 6 0 chrX 123658315 123658495 -42991801 - Lx LINE L1 -779 5104 4924 1 1528 1381 96 0 0 chrX 123658567 123658765 -42991531 + L1_Mm LINE L1 3968 4165 -1718 1 1528 201 39 0 0 chrX 123659045 123659071 -42991225 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 1528 231 36 0 0 chrX 123659196 123659224 -42991072 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1528 32 0 0 0 chrX 123659234 123659266 -42991030 + AT_rich Low_complexity Low_complexity 1 32 0 1 1528 37913 30 0 0 chrX 123659281 123665690 -42984606 - L1Md_T LINE L1 -12 6573 68 1 1528 904 155 0 0 chrX 123665904 123666052 -42984244 - Lx LINE L1 -949 4934 4787 1 1528 336 102 0 0 chrX 123668424 123668473 -42981823 + (ATG)n Simple_repeat Simple_repeat 1 49 0 1 1528 462 88 0 0 chrX 123669548 123669616 -42980680 + (TA)n Simple_repeat Simple_repeat 1 68 0 1 1528 1035 106 0 0 chrX 123671002 123671144 -42979152 + B1_Mus2 SINE Alu 6 147 0 1 1528 362 62 39 58 chrX 123671145 123671248 -42979048 + A-rich Low_complexity Low_complexity 2 102 0 1 1528 315 0 0 0 chrX 123671326 123671361 -42978935 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1528 2663 123 5 14 chrX 123672196 123672633 -42977663 + L1_Mm LINE L1 5362 5794 -89 1 1528 1503 122 10 78 chrX 123672629 123672922 -42977374 + L1_Mus2 LINE L1 6290 6562 -4 1 1528 5227 151 9 8 chrX 123672953 123673820 -42976476 + Lx LINE L1 5783 6650 -4 1 1528 2592 160 15 25 chrX 123673820 123674351 -42975945 - L1_Mm LINE L1 -630 5253 4728 1 1528 4375 100 49 0 chrX 123674352 123674983 -42975313 - L1_Mus1 LINE L1 0 6567 5906 1 1528 9176 129 2 8 chrX 123674983 123675690 -42974606 - L1_Mm LINE L1 -264 5619 4918 1 1528 2007 160 53 28 chrX 123675690 123676089 -42974207 - RLTR9E LTR ERVK 0 409 1 2 1528 9176 129 2 8 chrX 123676089 123676575 -42973721 - L1_Mm LINE L1 -966 4917 4431 1 1528 2669 73 143 139 chrX 123676575 123677085 -42973211 - RLTR1B LTR ERV1 0 512 1 2 1528 9176 129 2 8 chrX 123677085 123677416 -42972880 - L1_Mm LINE L1 -1453 4430 4104 1 1528 21 0 0 0 chrX 123678403 123678424 -42971872 + AT_rich Low_complexity Low_complexity 1 21 0 2 1528 255 79 0 0 chrX 123679791 123679829 -42970467 + (A)n Simple_repeat Simple_repeat 1 38 0 2 1528 459 256 49 16 chrX 123680388 123680511 -42969785 - ETnERV2-int LTR ERVK -210 7196 7070 2 1528 252 264 0 0 chrX 123681834 123681887 -42968409 - MTD LTR MaLR -14 405 353 2 1528 8279 107 7 0 chrX 123681887 123683154 -42967142 - RMER16-int LTR ERVK -1776 3630 2355 2 1528 186 128 0 0 chrX 123683154 123683193 -42967103 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1528 7183 120 33 31 chrX 123683193 123683818 -42966478 - RMER16-int LTR ERVK -3045 2361 1764 2 1528 198 0 0 0 chrX 123683818 123683840 -42966456 + (TTG)n Simple_repeat Simple_repeat 2 23 0 2 1528 7183 120 33 31 chrX 123683840 123684487 -42965809 - RMER16-int LTR ERVK -3643 1763 1088 2 1528 5794 35 0 0 chrX 123684495 123685174 -42965122 - L1Md_F2 LINE L1 -11 6571 5893 2 1528 2943 122 23 2 chrX 123685184 123685661 -42964635 - RMER16-int LTR ERVK -4227 1179 693 2 1528 801 119 0 0 chrX 123685663 123685814 -42964482 + (TC)n Simple_repeat Simple_repeat 2 152 0 2 1528 271 211 19 0 chrX 123686093 123686145 -42964151 + MTE2a LTR MaLR 86 138 -241 2 1528 261 0 0 0 chrX 123687134 123687163 -42963133 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1528 1845 207 30 12 chrX 123688155 123688556 -42961740 + Lx2B LINE L1 6583 6990 -10 2 1528 186 103 0 0 chrX 123690228 123690257 -42960039 + (TTTTTA)n Simple_repeat Simple_repeat 6 34 0 2 1528 8633 1 0 0 chrX 123690263 123691484 -42958812 - L1Md_A LINE L1 0 6582 5362 2 1528 242 325 25 12 chrX 123691730 123691811 -42958485 - ID4_ SINE ID 0 83 2 2 1528 677 155 34 0 chrX 123692476 123692680 -42957616 + GA-rich Low_complexity Low_complexity 1 210 0 2 1528 306 156 0 0 chrX 123692760 123692824 -42957472 + GA-rich Low_complexity Low_complexity 1 64 0 2 1528 455 310 0 9 chrX 123692826 123692940 -42957356 - B1F1 SINE Alu -34 115 3 2 1528 758 256 6 17 chrX 123693190 123693365 -42956931 + ORR1B1 LTR MaLR 31 203 -191 2 1528 8347 70 86 0 chrX 123693365 123694575 -42955721 - L1_Mm LINE L1 -241 5642 4329 2 1528 1020 90 0 14 chrX 123694575 123694721 -42955575 + BGLII LTR ERVK 278 421 0 2 1528 1575 160 29 4 chrX 123695029 123695305 -42954991 + ORR1A2 LTR MaLR 5 287 -40 2 1528 4126 97 2 0 chrX 123695305 123696196 -42954100 - L1_Mus3 LINE L1 -454 6112 5221 2 1528 2839 103 114 2 chrX 123696196 123696651 -42953645 + L1_Mus3 LINE L1 6127 6632 -6 2 1528 851 55 0 0 chrX 123696659 123696768 -42953528 + B1_Mm SINE Alu 26 134 -13 2 1528 320 64 21 0 chrX 123696768 123696815 -42953481 + (TAA)n Simple_repeat Simple_repeat 1 48 0 2 1528 319 107 89 0 chrX 123696818 123696874 -42953422 + ORR1A2 LTR MaLR 267 327 0 2 1528 327 336 0 24 chrX 123698434 123698559 -42951737 - Lx7 LINE L1 -674 7022 6901 2 1528 4117 184 98 8 chrX 123698561 123699581 -42950715 + L1_Mus1 LINE L1 184 1294 -5430 2 1528 2974 24 0 0 chrX 123699581 123699918 -42950378 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1528 52540 23 17 7 chrX 123699918 123706324 -42943972 + IAPEz-int LTR ERVK 8 6476 -5 2 1528 2922 27 3 0 chrX 123706329 123706665 -42943631 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1528 27663 117 4 6 chrX 123706665 123711937 -42938359 + L1_Mus1 LINE L1 1289 6552 -15 2 1528 517 268 0 14 chrX 123711975 123712119 -42938177 - Lx7 LINE L1 -805 6891 6750 2 1528 873 266 52 0 chrX 123712120 123712312 -42937984 + MT2A LTR ERVL 124 325 -208 2 1528 3197 183 42 13 chrX 123712433 123713057 -42937239 + RLTR26 LTR ERVK 1 642 0 2 1528 21 71 0 0 chrX 123713138 123713180 -42937116 + AT_rich Low_complexity Low_complexity 1 42 0 2 1528 21 0 0 0 chrX 123713241 123713262 -42937034 + AT_rich Low_complexity Low_complexity 1 21 0 2 1528 1379 204 19 9 chrX 123713338 123713654 -42936642 + L1_Mur2 LINE L1 5421 5739 -138 2 1528 21 36 0 0 chrX 123713723 123713751 -42936545 + AT_rich Low_complexity Low_complexity 1 28 0 2 1528 5988 200 27 30 chrX 123713848 123714979 -42935317 - Lx3C LINE L1 -5 6971 5842 2 1528 1131 95 0 0 chrX 123714979 123715126 -42935170 - B1_Mm SINE Alu 0 147 1 2 1528 6042 169 12 19 chrX 123715126 123716317 -42933979 - Lx3C LINE L1 -1135 5841 4660 2 1528 6247 106 3 5 chrX 123716316 123717262 -42933034 + L1_Mus3 LINE L1 5689 6632 -6 2 1528 885 254 34 83 chrX 123717503 123717968 -42932328 + RMER2 LTR ERV1 1 540 -27 2 1528 294 29 0 0 chrX 123718256 123718291 -42932005 + (TC)n Simple_repeat Simple_repeat 2 36 0 2 1528 249 33 0 0 chrX 123718291 123718320 -42931976 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 1528 825 40 0 0 chrX 123718796 123718897 -42931399 + (TTC)n Simple_repeat Simple_repeat 2 102 0 2 1528 756 121 15 36 chrX 123718957 123719094 -42931202 - RLTR10A LTR ERVK 0 411 278 2 1528 237 320 42 95 chrX 123719777 123719875 -42930421 - Lx8 LINE L1 -248 7225 7127 2 1528 4351 79 0 0 chrX 123719875 123720446 -42929850 + L1Md_T LINE L1 6012 6582 0 2 1528 237 320 42 95 chrX 123720446 123720537 -42929759 - Lx8 LINE L1 -347 7126 7046 2 1528 1701 141 30 12 chrX 123720542 123720986 -42929310 - ORR1A2 LTR MaLR -8 338 19 2 1528 1087 293 88 16 chrX 123720986 123721850 -42928446 - L1_Mur3 LINE L1 -2102 3778 2853 2 1528 461 239 14 48 chrX 123721847 123721992 -42928304 - Lx4A LINE L1 -1 7057 6918 2 1528 715 274 111 28 chrX 123721997 123722249 -42928047 - MT2B2 LTR ERVL -306 278 6 2 1528 3564 201 13 68 chrX 123722057 123722250 -42928046 - ORR1A2-int LTR MaLR -1170 793 618 2 1528 1062 146 16 0 chrX 123722250 123722435 -42927861 + B2_Mm1t SINE B2 1 188 -5 2 1528 3565 201 13 68 chrX 123722435 123723080 -42927216 - ORR1A2-int LTR MaLR -1346 617 1 2 1528 966 129 385 79 chrX 123723080 123723332 -42926964 - ORR1A2 LTR MaLR 0 329 1 2 1528 1115 267 70 40 chrX 123723332 123724026 -42926270 - L1_Mur3 LINE L1 -3935 1912 1203 2 1528 555 298 0 40 chrX 123724926 123725125 -42925171 - MTD LTR MaLR -216 203 13 2 1528 1137 65 0 0 chrX 123725130 123725269 -42925027 + B1_Mus1 SINE Alu 1 139 -9 2 1528 189 0 0 0 chrX 123725269 123725290 -42925006 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2 1528 3538 78 26 43 chrX 123725551 123726086 -42924210 + RLTR13B2 LTR ERVK 1 526 -296 2 1528 2881 34 7 109 chrX 123726768 123727198 -42923098 - RLTR10 LTR ERVK -4 386 1 2 1528 8733 22 0 1 chrX 123727200 123728196 -42922100 - RLTR10-int LTR ERVK -3 1984 990 2 1528 8156 27 1 0 chrX 123728275 123729223 -42921073 - RLTR10-int LTR ERVK -999 988 40 2 1528 2920 36 7 109 chrX 123729234 123729666 -42920630 - RLTR10 LTR ERVK -2 388 1 2 1528 411 21 0 0 chrX 123730112 123730160 -42920136 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1528 243 0 0 0 chrX 123731240 123731267 -42919029 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 23 30997 58 3 2 chrX 123731784 123736559 -42913737 - L1Md_T LINE L1 0 6582 1800 2 1529 801 31 0 0 chrX 123736561 123736657 -42913639 + (TA)n Simple_repeat Simple_repeat 1 96 0 2 1529 23 0 0 0 chrX 123737089 123737112 -42913184 + AT_rich Low_complexity Low_complexity 1 23 0 2 1529 399 391 70 16 chrX 123737112 123737362 -42912934 - MTE-int LTR MaLR -1109 471 201 2 1529 1508 167 19 181 chrX 123737362 123737831 -42912465 - RLTR9C LTR ERVK 0 393 1 2 1529 399 391 70 16 chrX 123737831 123737967 -42912329 - MTE-int LTR MaLR -1380 200 65 2 1529 250 344 101 53 chrX 123738447 123738674 -42911622 - ORR1E LTR MaLR -108 251 14 2 1529 2264 121 11 8 chrX 123738826 123739192 -42911104 - Lx2 LINE L1 0 6997 6631 2 1529 7013 102 10 21 chrX 123740124 123741179 -42909117 - L1_Mus3 LINE L1 -6 6632 5589 2 1529 190 73 24 24 chrX 123741201 123741243 -42909053 + (TTTTG)n Simple_repeat Simple_repeat 5 46 0 2 1529 855 298 59 52 chrX 123741530 123742110 -42908186 - Lx9 LINE L1 -9 7635 7052 2 1529 504 0 0 0 chrX 123742123 123742179 -42908117 + (GA)n Simple_repeat Simple_repeat 2 57 0 2 1529 609 257 17 78 chrX 123742290 123742522 -42907774 + Lx9 LINE L1 7298 7515 -129 2 1529 626 73 21 0 chrX 123742548 123742644 -42907652 + (CATATA)n Simple_repeat Simple_repeat 4 101 0 2 1529 499 244 19 51 chrX 123742644 123742860 -42907436 + Lx9 LINE L1 7419 7627 -17 2 1529 39 0 0 0 chrX 123743009 123743048 -42907248 + AT_rich Low_complexity Low_complexity 1 39 0 2 1529 212 175 0 0 chrX 123743189 123743229 -42907067 + A-rich Low_complexity Low_complexity 1 40 0 2 1529 4113 72 27 11 chrX 123743504 123744055 -42906241 + LTRIS2 LTR ERV1 5 564 0 2 1529 186 43 0 0 chrX 123744313 123744336 -42905960 + (T)n Simple_repeat Simple_repeat 1 23 0 2 1529 321 378 0 35 chrX 123744508 123744623 -42905673 + B1F SINE Alu 10 120 -29 2 1529 381 43 0 0 chrX 123744632 123744679 -42905617 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1529 782 318 123 6 chrX 123745866 123746185 -42904111 + ORR1E LTR MaLR 8 373 -1 2 1529 21 0 0 0 chrX 123746587 123746608 -42903688 + AT_rich Low_complexity Low_complexity 1 21 0 2 1529 24 0 0 0 chrX 123746668 123746692 -42903604 + AT_rich Low_complexity Low_complexity 1 24 0 2 1529 219 69 0 0 chrX 123747026 123747055 -42903241 + (TCC)n Simple_repeat Simple_repeat 3 31 0 2 1529 907 114 0 60 chrX 123747057 123747206 -42903090 - B1_Mus1 SINE Alu -7 141 2 2 1529 1694 196 11 62 chrX 123747207 123747561 -42902735 - ORR1C1 LTR MaLR -40 338 3 2 1529 784 195 212 7 chrX 123747809 123748095 -42902201 + MTC LTR MaLR 3 413 -8 2 1529 1765 259 181 44 chrX 123748520 123749356 -42900940 + RodERV21-int LTR ERV1 17 967 -4024 2 1529 248 64 0 41 chrX 123749864 123749913 -42900383 + Lx2A LINE L1 6962 7008 0 2 1529 6294 200 36 17 chrX 123750119 123752032 -42898264 - Lx5 LINE L1 -3 7047 5095 2 1529 413 196 96 51 chrX 123752040 123752196 -42898100 + RMER17C-int LTR ERVK 2361 2523 -715 2 1529 5005 179 107 8 chrX 123752198 123753202 -42897094 + RLTR25A LTR ERVK 1 1103 0 2 1529 225 159 0 102 chrX 123753207 123753233 -42897063 - LSU-rRNA_Hsa rRNA rRNA -730 4305 4284 2 1529 2176 156 120 39 chrX 123753233 123753725 -42896571 + RLTR47_MM LTR ERV1 1 532 0 2 1529 225 159 0 102 chrX 123753725 123753747 -42896549 - LSU-rRNA_Hsa rRNA rRNA -752 4283 4262 2 1529 666 245 41 46 chrX 123753748 123753966 -42896330 + RMER17C-int LTR ERVK 2627 2843 -395 2 1529 309 51 0 0 chrX 123753993 123754032 -42896264 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1529 704 278 39 92 chrX 123754041 123754212 -42896084 + RMER17C-int LTR ERVK 2949 3104 -134 2 1529 628 56 11 0 chrX 123754212 123754301 -42895995 - L1_Mus2 LINE L1 -4 6562 6473 2 1529 704 278 39 92 chrX 123754301 123754434 -42895862 + RMER17C-int LTR ERVK 3105 3237 -1 2 1529 537 16 0 0 chrX 123754563 123754625 -42895671 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 1529 1121 62 14 0 chrX 123754870 123755015 -42895281 + B1_Mm SINE Alu 1 147 0 2 1529 313 200 121 30 chrX 123755032 123755184 -42895112 + L1_Mur3 LINE L1 2838 3002 -2878 2 1529 1108 211 25 148 chrX 123755200 123755566 -42894730 - RLTR23 LTR ERV1 -109 321 1 3 1529 817 301 157 4 chrX 123755566 123756049 -42894247 + L1_Mur3 LINE L1 3327 3883 -1997 2 1529 1624 326 72 91 chrX 123756194 123757196 -42893100 - ORR1D-int LTR MaLR -102 1268 286 3 1529 288 0 0 0 chrX 123757433 123757465 -42892831 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 1529 1022 208 91 128 chrX 123757600 123758045 -42892251 - RMER17B LTR ERVK -225 417 10 3 1529 1985 82 3 30 chrX 123758200 123758503 -42891793 + L1Md_F2 LINE L1 6287 6581 -1 3 1529 608 319 103 4 chrX 123758536 123758778 -42891518 - ORR1D-int LTR MaLR -1311 269 4 3 1529 4243 121 75 103 chrX 123758832 123759764 -42890532 - RMER17A2 LTR ERVK 0 906 1 3 1529 234 246 58 58 chrX 123759835 123759904 -42890392 - MTEa LTR MaLR -106 273 205 3 1529 239 317 60 70 chrX 123760080 123760280 -42890016 + L1_Mur3 LINE L1 5188 5385 -495 2 1529 21 0 0 0 chrX 123760285 123760306 -42889990 + AT_rich Low_complexity Low_complexity 1 21 0 3 1529 543 364 82 58 chrX 123760507 123760832 -42889464 + Lx8 LINE L1 6633 6942 -531 3 1529 180 0 0 0 chrX 123760832 123760852 -42889444 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 1529 543 364 82 58 chrX 123760852 123760906 -42889390 + Lx8 LINE L1 6943 7002 -471 3 1529 579 60 0 0 chrX 123760906 123760990 -42889306 + L1Md_F2 LINE L1 6499 6582 0 3 1529 543 364 82 58 chrX 123760990 123761430 -42888866 + Lx8 LINE L1 7003 7471 -2 3 1529 2652 39 6 9 chrX 123761623 123761961 -42888335 + L1Md_F2 LINE L1 6234 6570 -12 3 1529 28 0 0 0 chrX 123762198 123762226 -42888070 + AT_rich Low_complexity Low_complexity 1 28 0 3 1529 387 0 0 0 chrX 123763165 123763208 -42887088 + (T)n Simple_repeat Simple_repeat 1 43 0 3 1529 596 291 80 49 chrX 123763525 123763789 -42886507 + Lx9 LINE L1 6920 7191 -453 3 1529 507 366 7 11 chrX 123763782 123764058 -42886238 - Lx9 LINE L1 -735 6909 6635 3 1529 6389 148 30 1 chrX 123764088 123765373 -42884923 - Lx LINE L1 -11 6643 5313 3 1529 3331 177 42 47 chrX 123765366 123765540 -42884756 + L1_Mur2 LINE L1 4578 4730 -1147 3 1529 240 35 0 0 chrX 123765540 123765569 -42884727 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1529 3331 177 42 47 chrX 123765569 123765915 -42884381 + L1_Mur2 LINE L1 4731 5093 -784 3 1529 3515 136 41 151 chrX 123765915 123766824 -42883472 - RMER17D2 LTR ERVK 0 809 1 3 1529 3331 194 36 45 chrX 123766824 123767069 -42883227 + L1_Mur2 LINE L1 5094 5372 -931 3 1529 410 333 107 28 chrX 123767070 123767286 -42883010 - Lx9 LINE L1 -1055 6589 6357 3 1529 544 246 132 10 chrX 123767559 123767732 -42882564 - Lx9 LINE L1 -1742 5954 5716 3 1529 306 0 0 0 chrX 123767732 123767766 -42882530 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 1529 544 223 135 10 chrX 123767766 123767873 -42882423 - Lx9 LINE L1 -132 5715 5608 3 1529 331 323 0 22 chrX 123767869 123768005 -42882291 - L1_Rod LINE L1 -805 5042 4910 3 1529 292 264 0 0 chrX 123768275 123768347 -42881949 - B1_Mur3 SINE Alu 0 149 78 3 1529 1401 239 80 79 chrX 123768413 123769338 -42880958 - L1_Rod LINE L1 -2183 3664 2739 3 1529 1152 260 4 30 chrX 123769341 123769607 -42880689 + MTC LTR MaLR 163 421 0 3 1529 663 285 0 30 chrX 123769631 123769866 -42880430 - L1_Rod LINE L1 -3328 2519 2292 3 1529 3672 117 23 5 chrX 123769933 123770493 -42879803 - L1_Mus1 LINE L1 0 6567 5998 3 1529 30677 116 21 6 chrX 123770497 123776777 -42873519 - L1Md_F2 LINE L1 -19 6563 190 3 1529 28065 119 22 11 chrX 123776774 123782520 -42867776 - L1_Mus2 LINE L1 -536 6030 217 3 1529 917 271 54 8 chrX 123782526 123782916 -42867380 - L1_Rod LINE L1 -3766 2081 1674 3 1529 23 0 0 0 chrX 123783067 123783090 -42867206 + AT_rich Low_complexity Low_complexity 1 23 0 3 1529 447 251 35 28 chrX 123783095 123783335 -42866961 - Lx9 LINE L1 -22 7622 7305 3 1529 1157 258 63 28 chrX 123783305 123784015 -42866281 - L1_Rod LINE L1 -4191 1656 918 3 1529 5765 173 15 15 chrX 123785855 123786936 -42863360 + Lx2 LINE L1 5917 6997 0 3 1529 985 199 8 56 chrX 123787194 123787373 -42862923 - RMER17C LTR ERVK 0 410 236 3 1529 570 29 0 0 chrX 123787373 123787441 -42862855 + (GA)n Simple_repeat Simple_repeat 2 69 0 3 1529 985 208 14 31 chrX 123787441 123787583 -42862713 - RMER17C LTR ERVK -175 235 2 3 1529 609 236 36 24 chrX 123787788 123788151 -42862145 + Lx6 LINE L1 994 1399 -4481 3 1529 1252 206 89 7 chrX 123788156 123788413 -42861883 - ORR1B2 LTR MaLR -8 359 81 3 1529 499 261 27 0 chrX 123788413 123788524 -42861772 - RMER13A LTR ERVK 0 860 747 3 1529 526 303 81 40 chrX 123788525 123788797 -42861499 - RLTR9A LTR ERVK 0 368 86 3 1529 2744 170 49 16 chrX 123788834 123789324 -42860972 - RMER13A LTR ERVK -354 506 1 3 1529 896 212 157 20 chrX 123789352 123789651 -42860645 - RMER17C LTR ERVK -70 340 1 3 1529 294 161 15 61 chrX 123789651 123789714 -42860582 - ORR1B2 LTR MaLR -307 60 1 3 1529 1043 213 4 9 chrX 123789714 123789941 -42860355 - ORR1B2-int LTR MaLR 0 1509 1284 3 1529 429 167 0 0 chrX 123789941 123790019 -42860277 + (TA)n Simple_repeat Simple_repeat 2 79 0 3 1529 1738 201 48 24 chrX 123790019 123790392 -42859904 - ORR1B2-int LTR MaLR -218 1291 910 3 1529 234 0 0 0 chrX 123790496 123790522 -42859774 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 3 1529 2617 201 41 106 chrX 123790993 123791092 -42859204 - RLTR22_Mur LTR ERVK -1099 749 678 3 1529 1014 78 42 14 chrX 123791092 123791235 -42859061 + B1_Mus1 SINE Alu 1 147 -1 3 1529 2617 201 41 106 chrX 123791235 123791936 -42858360 - RLTR22_Mur LTR ERVK -1171 677 1 3 1529 2904 244 62 50 chrX 123791936 123792080 -42858216 - ORR1B2-int LTR MaLR -594 915 809 3 1529 1523 98 0 0 chrX 123792080 123792294 -42858002 - L1_Mus2 LINE L1 0 6566 6353 3 1529 2904 244 62 50 chrX 123792294 123793053 -42857243 - ORR1B2-int LTR MaLR -701 808 1 3 1529 1677 227 23 8 chrX 123793059 123793410 -42856886 - ORR1B2 LTR MaLR -10 357 2 3 1529 1019 213 14 122 chrX 123793424 123793841 -42856455 + Lx6 LINE L1 1412 1783 -4097 3 1529 1672 199 6 19 chrX 123793839 123794203 -42856093 + Lx6 LINE L1 3842 4200 -1680 3 1529 258 105 0 0 chrX 123794230 123794268 -42856028 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 1529 622 147 28 7 chrX 123794313 123794457 -42855839 + (TA)n Simple_repeat Simple_repeat 2 148 0 3 1529 2563 199 60 28 chrX 123794459 123794879 -42855417 + Lx6 LINE L1 4209 4636 -1244 3 1529 192 77 0 0 chrX 123794879 123794905 -42855391 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1529 2563 199 60 28 chrX 123794905 123795152 -42855144 + Lx6 LINE L1 4637 4896 -984 3 1529 5490 239 39 13 chrX 123795152 123796519 -42853777 - Lx2B LINE L1 0 7000 5599 3 1529 4093 262 48 24 chrX 123796512 123799008 -42851288 + Lx6 LINE L1 4884 7447 -13 3 1529 6377 158 13 14 chrX 123799017 123800221 -42850075 + L1_Mur2 LINE L1 3254 4456 -1421 3 1529 457 333 31 59 chrX 123800696 123801000 -42849296 + SRV_MM-int LTR ERVK 1894 2192 -3975 3 1529 3446 30 0 0 chrX 123801000 123801396 -42848900 - MTA_Mm LTR MaLR 0 396 1 3 1529 457 333 45 56 chrX 123801396 123801574 -42848722 + SRV_MM-int LTR ERVK 2025 2206 -3961 3 1529 1380 302 54 49 chrX 123801930 123802781 -42847515 + SRV_MM-int LTR ERVK 2768 3937 -2884 3 1529 37871 30 0 0 chrX 123803122 123809563 -42840733 - L1Md_T LINE L1 0 6585 48 3 1529 772 299 57 48 chrX 123810143 123810837 -42839459 + SRV_MM-int LTR ERVK 3231 3836 -1570 3 1529 272 226 48 0 chrX 123811296 123811358 -42838938 + IAPEy-int LTR ERVK 6574 6638 -875 3 1529 6557 199 10 36 chrX 123812272 123812418 -42837878 + Lx LINE L1 4457 4601 -1282 3 1529 2488 98 6 3 chrX 123812418 123812777 -42837519 + L1_Mus2 LINE L1 6206 6565 -1 3 1529 6557 187 8 23 chrX 123812777 123814866 -42835430 + Lx LINE L1 4602 6648 -6 3 1529 5774 40 0 0 chrX 123815675 123816410 -42833886 + L1Md_T LINE L1 5890 6582 0 3 1529 3972 217 85 5 chrX 123817217 123818139 -42832157 + MERVL_2A-int LTR ERVL 670 1664 -4097 3 1529 1094 48 0 0 chrX 123818139 123818284 -42832012 - L1Md_A LINE L1 0 6582 6438 3 1529 7029 236 71 11 chrX 123818286 123819996 -42830300 + MERVL_2A-int LTR ERVL 2060 3872 -1889 3 1529 889 262 16 38 chrX 123819996 123820365 -42829931 + L1_Rod LINE L1 4759 5119 -728 3 1529 8172 83 32 1 chrX 123820385 123821528 -42828768 + L1Md_F2 LINE L1 4407 5585 -298 3 1529 7399 80 0 9 chrX 123821529 123822522 -42827774 + L1Md_F2 LINE L1 5587 6570 -12 3 1529 440 114 0 0 chrX 123822540 123822619 -42827677 + L1_Rod LINE L1 5155 5233 -614 3 1529 1015 294 16 6 chrX 123822641 123822952 -42827344 + Lx7 LINE L1 6925 7238 -458 3 1529 605 274 21 11 chrX 123822955 123823143 -42827153 + Lx9 LINE L1 5360 5549 -298 3 1529 785 147 127 0 chrX 123823143 123823300 -42826996 + RLTR47_MM LTR ERV1 356 532 0 3 1529 539 249 47 24 chrX 123823755 123823924 -42826372 + MMERGLN-int LTR ERV1 526 698 -6858 3 1529 289 330 50 35 chrX 123824365 123824566 -42825730 + MMERGLN-int LTR ERV1 1124 1327 -6229 3 1529 2057 107 137 8 chrX 123824605 123824999 -42825297 + RLTR47_MM LTR ERV1 1 445 -87 3 1529 486 0 0 0 chrX 123825005 123825059 -42825237 + (TAAAA)n Simple_repeat Simple_repeat 2 55 0 3 1529 1333 223 6 3 chrX 123825059 123825196 -42825100 + Lx9 LINE L1 5532 5667 -180 3 1529 245 29 0 29 chrX 123825196 123825231 -42825065 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1529 1333 243 29 19 chrX 123825231 123825630 -42824666 + Lx9 LINE L1 5668 6108 -1536 3 1529 12936 207 57 53 chrX 123825677 123827327 -42822969 + L1_Mur3 LINE L1 1406 2998 -2882 3 1529 234 0 0 0 chrX 123827327 123827353 -42822943 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 1529 195 42 0 0 chrX 123827353 123827376 -42822920 + (GA)n Simple_repeat Simple_repeat 1 24 0 3 1529 12936 207 57 53 chrX 123827376 123827839 -42822457 + L1_Mur3 LINE L1 2999 3490 -2390 3 1529 231 36 0 0 chrX 123827839 123827867 -42822429 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 1529 976 126 0 0 chrX 123827867 123828002 -42822294 - B1_Mus2 SINE Alu -11 136 2 3 1529 12936 207 57 53 chrX 123828002 123828784 -42821512 + L1_Mur3 LINE L1 3491 4299 -1581 3 1529 5894 33 0 0 chrX 123828784 123829477 -42820819 + L1Md_T LINE L1 5888 6580 -2 3 1529 12936 207 57 53 chrX 123829477 123830328 -42819968 + L1_Mur3 LINE L1 4300 5169 -711 3 1529 3181 283 28 31 chrX 123830325 123830533 -42819763 + Lx6 LINE L1 6527 6736 -724 3 1529 180 0 0 0 chrX 123830533 123830553 -42819743 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 1529 3181 283 28 31 chrX 123830553 123831062 -42819234 + Lx6 LINE L1 6737 7251 -209 3 1529 519 17 0 0 chrX 123831062 123831122 -42819174 + (TC)n Simple_repeat Simple_repeat 2 61 0 3 1529 3181 283 28 31 chrX 123831122 123831329 -42818967 + Lx6 LINE L1 7252 7448 -12 3 1529 522 70 0 0 chrX 123832274 123832345 -42817951 + (TA)n Simple_repeat Simple_repeat 2 72 0 3 1529 328 176 132 0 chrX 123832870 123832938 -42817358 + B2_Mm2 SINE B2 63 139 -56 3 1529 746 98 182 24 chrX 123833050 123833166 -42817130 + B1_Mm SINE Alu 1 139 -8 3 1529 293 0 27 0 chrX 123833166 123833203 -42817093 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3 1529 288 188 354 30 chrX 123833321 123833368 -42816928 + Lx9 LINE L1 7284 7340 -304 3 1529 639 87 0 0 chrX 123833368 123833472 -42816824 + (GA)n Simple_repeat Simple_repeat 1 104 0 3 1529 288 188 354 30 chrX 123833472 123833523 -42816773 + Lx9 LINE L1 7341 7414 -230 3 1529 243 239 0 0 chrX 123833675 123833742 -42816554 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 1529 37 52 0 0 chrX 123833835 123833893 -42816403 + AT_rich Low_complexity Low_complexity 1 58 0 3 1529 4901 96 6 14 chrX 123834087 123835381 -42814915 + L1Md_F LINE L1 438 1895 -3988 3 1529 403 208 140 9 chrX 123835398 123835505 -42814791 - ETnERV2-int LTR ERVK -4790 2616 2496 3 1529 5202 126 68 30 chrX 123835530 123836495 -42813801 - ETnERV2-int LTR ERVK -5321 2085 1083 3 1529 243 61 0 0 chrX 123836495 123836528 -42813768 + (TTTTA)n Simple_repeat Simple_repeat 4 36 0 3 1529 5202 246 62 3420 chrX 123836528 123836849 -42813447 - ETnERV2-int LTR ERVK -6324 1082 1078 3 1529 2326 159 15 42 chrX 123836860 123837268 -42813028 - RLTR9D LTR ERVK -6 397 1 3 1529 321 260 32 0 chrX 123837476 123837599 -42812697 + L1_Mur3 LINE L1 1270 1396 -4484 3 1529 23271 165 21 38 chrX 123837657 123842812 -42807484 + L1VL4 LINE L1 699 5766 -117 3 1529 6891 250 23 11 chrX 123842808 123845030 -42805266 + Lx7 LINE L1 5116 7370 -326 3 1529 1610 200 78 18 chrX 123845030 123845427 -42804869 + MTC LTR MaLR 1 421 0 3 1529 6891 257 27 14 chrX 123845427 123845449 -42804847 + Lx7 LINE L1 7371 7391 -305 3 1529 270 0 0 0 chrX 123845550 123845580 -42804716 + (TTC)n Simple_repeat Simple_repeat 1 30 0 3 1529 294 246 65 65 chrX 123845594 123845733 -42804563 + Lx7 LINE L1 7558 7696 0 3 1529 1204 109 43 0 chrX 123845773 123845957 -42804339 + B2_Mm2 SINE B2 2 193 -2 3 1529 819 304 73 10 chrX 123846142 123846431 -42803865 + Lx6 LINE L1 7147 7453 -7 3 1529 31 0 0 0 chrX 123847013 123847044 -42803252 + AT_rich Low_complexity Low_complexity 1 31 0 3 1529 966 322 42 20 chrX 123847727 123848085 -42802211 + Lx9 LINE L1 6359 6724 -920 3 1529 477 90 0 0 chrX 123848178 123848245 -42802051 + (TTTC)n Simple_repeat Simple_repeat 3 69 0 3 1529 1149 283 86 36 chrX 123848403 123848880 -42801416 - Lx9 LINE L1 -273 7371 6871 3 1529 291 362 6 6 chrX 123849564 123849728 -42800568 + RNERVK23-int LTR ERVK 289 452 -7765 3 1529 273 262 0 12 chrX 123849818 123849899 -42800397 + RMER16-int LTR ERVK 190 269 -7948 3 1529 204 148 32 16 chrX 123849948 123850010 -42800286 + A-rich Low_complexity Low_complexity 1 63 0 3 1529 2438 141 131 42 chrX 123850236 123850755 -42799541 + RMER16-int LTR ERVK 255 819 -4587 3 1529 920 161 76 51 chrX 123850760 123850957 -42799339 + RMER16-int LTR ERVK 1089 1290 -4116 3 1529 1776 188 55 65 chrX 123850966 123851382 -42798914 + RMER16-int LTR ERVK 2339 2750 -4656 3 1529 1271 202 58 23 chrX 123851375 123851684 -42798612 + RMER16-int LTR ERVK 3293 3612 -3794 3 1529 1043 65 0 0 chrX 123851686 123851824 -42798472 + B1_Mus2 SINE Alu 2 139 -8 3 1529 243 0 0 0 chrX 123851875 123851902 -42798394 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1529 1511 205 13 3 chrX 123851921 123852239 -42798057 + ETnERV2-int LTR ERVK 2519 2839 -2567 4 1529 360 229 0 0 chrX 123852277 123852360 -42797936 + RMER16-int LTR ERVK 1668 1750 -3656 4 1529 333 0 0 0 chrX 123852360 123852397 -42797899 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 4 1529 443 125 0 0 chrX 123852398 123852462 -42797834 - B1_Mus2 SINE Alu -6 141 78 4 1529 2029 254 61 8 chrX 123852464 123853029 -42797267 + ETnERV2-int LTR ERVK 4083 4534 -2872 4 1529 1492 294 37 58 chrX 123853090 123853983 -42796313 + ETnERV2-int LTR ERVK 5122 5894 -1512 4 1529 6854 79 5 11 chrX 123857326 123858274 -42792022 - L1Md_F2 LINE L1 -12 6570 5660 4 1529 305 299 51 10 chrX 123859139 123859237 -42791059 + RMER5 LTR ERV1 433 534 0 4 1529 423 0 0 0 chrX 123859295 123859342 -42790954 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1529 321 26 0 0 chrX 123859519 123859557 -42790739 + (GTTTG)n Simple_repeat Simple_repeat 2 39 0 4 1529 3916 173 63 68 chrX 123859635 123860555 -42789741 + RMER17B LTR ERVK 1 955 -3 4 1529 333 0 0 0 chrX 123860719 123860756 -42789540 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 4 1529 443 167 0 25 chrX 123860768 123860848 -42789448 - URR1B DNA MER1_type -1 224 147 4 1529 2472 242 33 26 chrX 123860945 123861532 -42788764 + L1_Mur2 LINE L1 5 566 -6146 4 1529 388 258 21 0 chrX 123862022 123862115 -42788181 + U6 snRNA snRNA 2 96 -11 4 1529 307 233 86 19 chrX 123862135 123862240 -42788056 + L1M2 LINE L1 3646 3757 -2386 4 1529 652 84 9 27 chrX 123862280 123862456 -42787840 - L1Md_F2 LINE L1 0 6582 6463 4 191 32720 99 9 15 chrX 123862456 123868424 -42781872 - L1Md_F2 LINE L1 -235 6347 422 4 1530 4836 150 8 72 chrX 123868459 123869422 -42780874 + RLTR13D6 LTR ERVK 1 902 0 4 1530 7308 182 93 15 chrX 123869431 123871875 -42778421 - Lx2 LINE L1 -15 6982 4256 4 1530 6933 110 22 5 chrX 123871875 123872879 -42777417 + RLTR13D5 LTR ERVK 3 1023 0 4 1530 6456 188 177 14 chrX 123872879 123873171 -42777125 - Lx2 LINE L1 -1622 4255 3965 4 1530 27145 141 17 5 chrX 123873184 123878815 -42771481 - L1_Mus2 LINE L1 0 6654 895 4 1530 2165 34 4 0 chrX 123878815 123879077 -42771219 + L1Md_A LINE L1 6320 6582 0 4 1530 2621 246 67 29 chrX 123879077 123879589 -42770707 - L1_Mus2 LINE L1 -5722 894 353 4 1530 396 228 62 23 chrX 123879598 123879728 -42770568 - L1VL2 LINE L1 -6139 196 62 4 1530 4398 35 0 0 chrX 123879801 123880315 -42769981 + L1Md_F2 LINE L1 6066 6579 -3 4 1530 4251 103 10 2 chrX 123880317 123880920 -42769376 + Lx3_Mus LINE L1 6394 7001 -8 4 1530 24 32 0 0 chrX 123881215 123881246 -42769050 + AT_rich Low_complexity Low_complexity 1 31 0 4 1530 420 20 0 0 chrX 123881284 123881333 -42768963 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1530 2216 89 5 97 chrX 123881689 123882113 -42768183 - MusHAL1 LINE L1 -1789 923 539 4 1530 2718 130 82 16 chrX 123882113 123882606 -42767690 - RLTR13C1 LTR ERVK 0 983 326 4 1530 3326 144 4 22 chrX 123882606 123883153 -42767143 - MusHAL1 LINE L1 -2814 540 4 4 1530 607 202 0 0 chrX 123883407 123883516 -42766780 - ORR1A2 LTR MaLR -86 241 133 4 1530 10214 214 36 24 chrX 123883516 123884034 -42766262 - Lx2 LINE L1 -1911 3975 3487 4 1530 333 47 0 0 chrX 123884034 123884077 -42766219 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1530 10214 214 36 24 chrX 123884077 123886156 -42764140 - Lx2 LINE L1 -2400 3486 1347 4 1530 2313 85 0 12 chrX 123886442 123886764 -42763532 - L1Md_F2 LINE L1 -12 6570 6253 4 1530 2326 157 36 0 chrX 123886778 123887217 -42763079 - L1VL4 LINE L1 -5313 989 535 4 1530 1436 280 77 0 chrX 123887387 123887776 -42762520 + MTC LTR MaLR 1 419 -2 4 1530 427 364 32 0 chrX 123888961 123889121 -42761175 + B3A SINE B2 6 167 -31 4 1530 387 41 0 0 chrX 123889121 123889170 -42761126 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1530 420 384 21 11 chrX 123889170 123889196 -42761100 + B3 SINE B2 166 193 -23 4 1530 1189 83 0 16 chrX 123889238 123889421 -42760875 - L1Md_F2 LINE L1 0 6582 6403 4 1530 617 131 0 9 chrX 123889443 123889551 -42760745 + (TTCC)n Simple_repeat Simple_repeat 2 108 0 4 1530 482 235 14 50 chrX 123890371 123890510 -42759786 + MTD LTR MaLR 3 136 -283 4 1530 493 230 266 5 chrX 123890521 123890713 -42759583 + MTD LTR MaLR 178 419 0 4 1530 2393 179 46 65 chrX 123891296 123891383 -42758913 - RLTR20A LTR ERVK -8 533 452 4 1530 270 0 0 0 chrX 123891383 123891413 -42758883 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1530 2393 179 46 65 chrX 123891413 123891868 -42758428 - RLTR20A LTR ERVK -90 451 2 4 1530 279 54 0 0 chrX 123891947 123891984 -42758312 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1530 633 339 6 0 chrX 123891990 123892164 -42758132 - B3 SINE B2 -40 176 2 4 1530 222 321 0 0 chrX 123892313 123892369 -42757927 - PB1D10 SINE Alu -16 101 46 4 1530 24 32 0 0 chrX 123893107 123893138 -42757158 + AT_rich Low_complexity Low_complexity 1 31 0 4 1530 546 323 72 50 chrX 123893282 123893649 -42756647 + MLT2C2 LTR ERVL 1 362 -35 4 1530 1164 74 0 0 chrX 123894230 123894378 -42755918 - B1_Mus1 SINE Alu 0 148 1 4 1530 334 347 94 42 chrX 123894696 123895027 -42755269 + L1ME3B LINE L1 5492 5839 -401 4 1530 270 136 0 0 chrX 123895408 123895452 -42754844 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1530 1172 129 0 0 chrX 123895452 123895630 -42754666 - B2_Mm2 SINE B2 -17 178 1 4 1530 1604 313 40 36 chrX 123895640 123896297 -42753999 - RMER1C Other Other -3 1339 681 4 1530 572 289 59 15 chrX 123896873 123897077 -42753219 + ID_B1 SINE B4 4 216 -8 4 1530 230 329 25 0 chrX 123897489 123897568 -42752728 - ID4_ SINE ID -1 82 2 4 1530 225 0 0 0 chrX 123897642 123897667 -42752629 + (TA)n Simple_repeat Simple_repeat 2 26 0 4 1530 306 0 0 0 chrX 123897667 123897700 -42752596 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1530 185 86 0 54 chrX 123897793 123897830 -42752466 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1530 292 391 42 39 chrX 123898074 123898283 -42752013 - Charlie8 DNA MER1_type 0 341 97 4 1530 425 233 11 22 chrX 123898300 123898392 -42751904 + RSINE1 SINE B4 3 93 -72 4 1530 549 0 0 0 chrX 123898402 123898463 -42751833 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 1530 4805 231 40 53 chrX 123899006 123900015 -42750281 - ORR1B2-int LTR MaLR -94 1415 427 4 1530 668 35 0 0 chrX 123900015 123900102 -42750194 - L1_Mus1 LINE L1 -2 6565 6479 4 1530 4805 231 40 53 chrX 123900102 123900388 -42749908 - ORR1B2-int LTR MaLR -1083 426 137 4 1530 299 327 30 0 chrX 123900755 123900856 -42749440 - RMER20B LTR ERVK -523 104 1 4 1530 717 184 66 0 chrX 123900856 123901000 -42749296 - ORR1B2-int LTR MaLR -1354 155 2 4 1530 982 196 5 0 chrX 123901005 123901189 -42749107 - ORR1B2 LTR MaLR -8 359 175 4 1530 651 254 53 61 chrX 123901189 123901571 -42748725 - L1_Rod LINE L1 -2314 3533 3132 4 1530 24 0 0 0 chrX 123901583 123901607 -42748689 + AT_rich Low_complexity Low_complexity 1 24 0 4 1530 268 256 154 39 chrX 123901661 123901791 -42748505 - L1_Rod LINE L1 -3538 2309 2165 4 1530 755 224 7 13 chrX 123901924 123902073 -42748223 - B1_Mur4 SINE Alu 0 150 3 4 1530 1035 133 81 0 chrX 123902074 123902247 -42748049 - B2_Mm2 SINE B2 -6 189 3 4 1530 1557 246 86 28 chrX 123902374 123903044 -42747252 - L1_Rod LINE L1 -4040 1807 1085 4 1530 39 68 0 0 chrX 123904170 123904244 -42746052 + AT_rich Low_complexity Low_complexity 1 74 0 4 1530 33 0 0 0 chrX 123904325 123904358 -42745938 + AT_rich Low_complexity Low_complexity 1 33 0 4 1530 213 39 0 0 chrX 123904593 123904619 -42745677 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1530 37836 30 0 1 chrX 123905123 123911700 -42738596 - L1Md_T LINE L1 0 6585 1 4 1530 3833 269 65 20 chrX 123911762 123911875 -42738421 - Lx9 LINE L1 -2 7642 7522 4 1530 432 0 0 0 chrX 123911875 123911923 -42738373 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1530 3833 269 65 20 chrX 123911923 123913001 -42737295 - Lx9 LINE L1 -123 7521 6398 4 1530 186 71 0 0 chrX 123913425 123913453 -42736843 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 4 1530 1097 102 0 0 chrX 123913454 123913601 -42736695 - B1_Mus2 SINE Alu 0 147 1 4 1530 214 195 0 0 chrX 123914079 123914120 -42736176 + (TTA)n Simple_repeat Simple_repeat 1 41 0 4 1530 306 206 0 0 chrX 123914722 123914795 -42735501 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 4 1530 39 22 0 0 chrX 123915062 123915108 -42735188 + AT_rich Low_complexity Low_complexity 1 46 0 4 1530 22 0 0 0 chrX 123915169 123915191 -42735105 + AT_rich Low_complexity Low_complexity 1 22 0 4 1530 204 97 0 0 chrX 123915875 123915906 -42734390 + (TTTTTG)n Simple_repeat Simple_repeat 4 34 0 4 1530 26 50 0 0 chrX 123915941 123915981 -42734315 + AT_rich Low_complexity Low_complexity 1 40 0 4 1530 1233 163 0 0 chrX 123915986 123916189 -42734107 - Lx2 LINE L1 -19 6978 6776 4 1530 346 74 0 18 chrX 123916190 123916245 -42734051 - Lx2 LINE L1 -355 6642 6589 4 1530 305 335 78 27 chrX 123916395 123916690 -42733606 - L1MC LINE L1 -3203 2943 2634 4 1530 630 123 6 25 chrX 123916912 123917071 -42733225 + T-rich Low_complexity Low_complexity 2 157 0 4 1530 543 297 29 24 chrX 123917172 123917379 -42732917 + Lx8 LINE L1 6639 6846 -627 4 1530 421 234 48 48 chrX 123917648 123917848 -42732448 - Lx7 LINE L1 -1672 5972 5768 4 1530 17276 67 16 8 chrX 123917849 123920907 -42729389 - L1Md_F2 LINE L1 -3 6579 3499 4 1530 264 292 22 104 chrX 123920914 123921048 -42729248 - Lx7 LINE L1 -1937 5759 5637 4 1530 295 220 58 23 chrX 123921628 123921757 -42728539 - L1_Rod LINE L1 -2814 3326 3203 4 1530 327 355 49 8 chrX 123921798 123921920 -42728376 + MTD LTR MaLR 71 197 -222 4 1530 1470 268 85 82 chrX 123921916 123922121 -42728175 + MTD-int LTR MaLR 600 790 -468 4 1530 4186 128 96 17 chrX 123922121 123922870 -42727426 - RMER17D2 LTR ERVK 0 809 2 4 1530 1470 268 85 82 chrX 123922870 123923311 -42726985 + MTD-int LTR MaLR 791 1248 -10 4 1530 252 186 31 113 chrX 123923320 123923417 -42726879 + MTD LTR MaLR 1 89 -330 4 1530 307 258 0 0 chrX 123923724 123923790 -42726506 + MTC-int LTR MaLR 223 288 -970 4 1530 565 276 102 29 chrX 123923790 123923995 -42726301 - MTC-int LTR MaLR -746 512 293 4 1530 658 291 45 25 chrX 123924007 123924250 -42726046 + MTD LTR MaLR 172 419 0 4 1530 376 293 113 122 chrX 123924250 123924696 -42725600 - L1_Rod LINE L1 -2684 3196 2729 4 1530 1009 109 0 33 chrX 123924696 123924848 -42725448 - B1_Mus1 SINE Alu 0 148 2 4 1530 376 293 113 122 chrX 123924848 123924882 -42725414 - L1_Rod LINE L1 -3152 2728 2699 4 1530 198 0 0 0 chrX 123924882 123924904 -42725392 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 4 1530 378 293 113 122 chrX 123924904 123925665 -42724631 - L1_Rod LINE L1 -3182 2698 1965 4 1530 1849 173 22 0 chrX 123926519 123926837 -42723459 - ORR1A4 LTR MaLR -4 325 1 4 1530 21 0 0 0 chrX 123930392 123930413 -42719883 + AT_rich Low_complexity Low_complexity 1 21 0 4 1530 226 111 0 0 chrX 123931313 123931349 -42718947 - ID_B1 SINE B4 0 224 189 4 1530 990 257 59 73 chrX 123931897 123932378 -42717918 - MT2A LTR ERVL 0 533 11 4 1530 242 94 0 0 chrX 123932378 123932410 -42717886 + RLTR13B3 LTR ERVK 1 32 -897 4 1530 10702 15 0 0 chrX 123932410 123933647 -42716649 + L1_Mm LINE L1 3857 5093 -790 4 1530 7112 51 11 2 chrX 123933647 123934555 -42715741 + RLTR13B3 LTR ERVK 14 929 0 4 1530 373 287 8 8 chrX 123934567 123934690 -42715606 - Ricksha_c DNA MuDR -1697 351 229 5 1530 428 231 61 34 chrX 123934581 123934694 -42715602 - MERVL_2A-int LTR ERVL -10 5751 5641 5 1530 1114 270 99 0 chrX 123934694 123935039 -42715257 + RLTR30 LTR ERV1 1 379 0 5 1530 428 231 61 34 chrX 123935039 123935073 -42715223 - MERVL_2A-int LTR ERVL -121 5640 5600 5 1530 3641 269 65 31 chrX 123935126 123936608 -42713688 - MERVL_2A-int LTR ERVL -308 5449 3761 5 1530 3203 143 23 26 chrX 123936610 123937176 -42713120 - LTRIS2 LTR ERV1 0 564 1 5 1530 947 219 45 0 chrX 123937177 123937401 -42712895 - MuRRS4-int LTR ERV1 -42 5021 4788 5 1530 11098 232 43 38 chrX 123937392 123940343 -42709953 - MuRRS4-int LTR ERV1 -792 4271 1305 5 1530 3110 151 21 26 chrX 123940384 123940913 -42709383 - RLTR1D LTR ERV1 -16 589 64 5 1530 2062 158 127 0 chrX 123940954 123941309 -42708987 - MuRRS4-int LTR ERV1 -3798 1265 866 5 1530 459 189 42 77 chrX 123941306 123941449 -42708847 - MuRRS4-int LTR ERV1 -4589 474 337 5 1530 4521 82 21 0 chrX 123941530 123942155 -42708141 + RLTR13D6 LTR ERVK 265 902 0 5 1530 274 164 73 0 chrX 123942696 123942751 -42707545 - ORR1B2 LTR MaLR 0 367 309 5 1530 543 213 14 62 chrX 123942751 123942909 -42707387 - RMER1C Other Other -13 1329 1199 5 1530 338 120 0 0 chrX 123942923 123942973 -42707323 - RMER1C Other Other -148 1194 1145 5 1530 991 246 39 5 chrX 123942975 123943183 -42707113 + 7SK RNA RNA 18 232 -99 5 1530 1335 232 52 30 chrX 123943166 123943495 -42706801 - ORR1B2 LTR MaLR -31 336 1 5 1530 4803 230 105 5 chrX 123943495 123944865 -42705431 - ORR1B2-int LTR MaLR 0 1509 3 5 1530 1246 189 22 4 chrX 123944871 123945100 -42705196 - ORR1B2 LTR MaLR -9 358 126 5 1530 216 0 0 0 chrX 123945148 123945172 -42705124 + (CAAAC)n Simple_repeat Simple_repeat 1 24 0 5 1530 273 290 0 0 chrX 123945210 123945279 -42705017 + B3A SINE B2 65 133 -65 5 1530 479 248 30 0 chrX 123945343 123945499 -42704797 - Lx4B LINE L1 -20 7038 6887 5 1530 5433 221 73 36 chrX 123945494 123945662 -42704634 - L1_Mur3 LINE L1 -1661 4219 4045 5 1530 269 26 26 0 chrX 123945662 123945700 -42704596 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 5 1530 5433 221 73 36 chrX 123945700 123946129 -42704167 - L1_Mur3 LINE L1 -1836 4044 3633 5 1530 441 0 0 0 chrX 123946129 123946178 -42704118 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1530 5433 221 73 36 chrX 123946178 123947335 -42702961 - L1_Mur3 LINE L1 -2248 3632 2401 5 1530 11943 188 25 17 chrX 123947564 123948893 -42701403 + MusHAL1 LINE L1 748 2085 -3801 5 1530 1035 115 0 13 chrX 123948893 123949043 -42701253 + B1_Mus1 SINE Alu 1 148 0 5 1530 11943 197 19 14 chrX 123949043 123950716 -42699580 + MusHAL1 LINE L1 2086 3773 -2113 5 1530 1196 45 0 6 chrX 123950716 123950872 -42699424 + (GAA)n Simple_repeat Simple_repeat 1 155 0 5 1530 11943 197 19 14 chrX 123950872 123951116 -42699180 + MusHAL1 LINE L1 3774 4014 -1872 5 1530 1814 218 18 24 chrX 123951114 123951608 -42698688 - L1_Mur3 LINE L1 -3957 1923 1433 5 1530 830 141 6 0 chrX 123951609 123951765 -42698531 + (TTTC)n Simple_repeat Simple_repeat 1 157 0 5 1530 261 0 0 0 chrX 123951767 123951796 -42698500 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 5 1530 540 243 40 37 chrX 123951797 123952055 -42698241 - L1_Mur3 LINE L1 -4455 1425 1172 5 1530 868 264 44 56 chrX 123952046 123952528 -42697768 - L1_Mur3 LINE L1 -6439 1289 814 5 1530 6593 122 11 10 chrX 123954167 123955197 -42695099 + Lx3_Mus LINE L1 5979 7009 0 5 1530 33227 77 8 1 chrX 123956994 123963176 -42687120 - L1Md_F2 LINE L1 0 6582 355 5 1530 21 36 0 0 chrX 123963473 123963501 -42686795 + AT_rich Low_complexity Low_complexity 1 28 0 5 1530 28339 131 20 7 chrX 123963916 123969982 -42680314 - L1_Mus1 LINE L1 -2 6565 415 5 1530 878 340 35 0 chrX 123970160 123970445 -42679851 + ORR1D2 LTR MaLR 1 295 -75 5 1530 1648 297 21 39 chrX 123970445 123971003 -42679293 - RMER15 LTR ERVL 0 575 28 5 1530 5196 141 12 10 chrX 123971031 123971915 -42678381 + Lx2 LINE L1 6110 6995 -2 5 1530 430 219 0 0 chrX 123971979 123972061 -42678235 + ORR1D2 LTR MaLR 287 368 -2 5 1530 481 226 76 42 chrX 123972134 123972370 -42677926 - Lx7 LINE L1 -4 7692 7449 5 1530 23 0 0 0 chrX 123972391 123972414 -42677882 + AT_rich Low_complexity Low_complexity 1 23 0 5 1530 682 282 46 31 chrX 123972468 123973014 -42677282 - L1_Mur3 LINE L1 -1149 4731 4178 5 1530 10907 124 15 39 chrX 123973086 123973591 -42676705 - RLTR22_Mur LTR ERVK -4 1844 1345 5 1530 300 111 0 0 chrX 123973591 123973636 -42676660 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1530 10907 124 15 39 chrX 123973636 123974976 -42675320 - RLTR22_Mur LTR ERVK -504 1344 43 5 1530 3515 208 49 36 chrX 123974976 123975854 -42674442 + Lx6 LINE L1 1212 2113 -3767 5 1530 468 35 0 0 chrX 123975854 123975912 -42674384 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 1530 3515 208 49 36 chrX 123975912 123976140 -42674156 + Lx6 LINE L1 2114 2331 -3549 5 1530 2912 189 26 2 chrX 123976144 123976678 -42673618 - RLTR17 LTR ERVK 0 692 146 5 1530 10999 221 68 34 chrX 123976678 123977608 -42672688 + Lx6 LINE L1 2581 3482 -2395 5 1530 1037 90 0 43 chrX 123977608 123977793 -42672503 + (GAAAA)n Simple_repeat Simple_repeat 1 177 0 5 1530 10999 221 75 31 chrX 123977793 123980091 -42670205 + Lx6 LINE L1 3483 5927 -1123 5 1530 2664 131 2 16 chrX 123980092 123980519 -42669777 - BGLII LTR ERVK 0 421 1 5 1530 1902 203 92 7 chrX 123980519 123981094 -42669202 - MYSERV16_I-int LTR ERVK 0 2326 1703 5 1530 1199 211 36 63 chrX 123981446 123981810 -42668486 - RMER3D-int LTR ERVK -582 2260 1907 5 1530 588 203 34 27 chrX 123981811 123981958 -42668338 - RMER3D-int LTR ERVK -1163 1679 1532 5 1530 1251 260 82 113 chrX 123981991 123982903 -42667393 - RMER3D-int LTR ERVK -1305 1537 654 5 1530 2592 130 12 8 chrX 123983235 123983661 -42666635 - BGLII LTR ERVK -27 394 1 5 1530 900 306 39 21 chrX 123983666 123984085 -42666211 + Lx6 LINE L1 5925 6605 -855 5 1530 589 214 34 0 chrX 123984090 123984207 -42666089 + MTC LTR MaLR 1 121 -286 5 1530 2996 51 0 0 chrX 123984209 123984563 -42665733 + IAPEY2_LTR LTR ERVK 1 354 -3 5 1530 769 171 5 42 chrX 123984563 123984727 -42665569 + IAPEY3-int LTR ERVK 1 180 -1290 5 1530 8990 136 10 37 chrX 123984726 123986226 -42664070 + IAPEY3-int LTR ERVK 524 1982 -5698 5 1530 3476 76 7 0 chrX 123986206 123986651 -42663645 + IAPEY3-int LTR ERVK 2242 2689 -4991 5 1530 480 51 0 0 chrX 123986644 123986703 -42663593 + IAPEY3-int LTR ERVK 4852 4910 -2770 5 1530 3383 121 15 29 chrX 123986703 123987436 -42662860 + IAPEY3-int LTR ERVK 6907 7581 0 5 1530 2881 67 0 0 chrX 123987436 123987793 -42662503 + IAPEY2_LTR LTR ERVK 1 357 0 5 1530 1040 240 63 24 chrX 123987793 123988058 -42662238 + MTC LTR MaLR 118 373 -34 5 191 31694 109 13 3 chrX 123988060 123994182 -42656114 - L1Md_F2 LINE L1 -17 6565 381 5 1531 512 282 99 43 chrX 123994236 123994336 -42655960 + Lx6 LINE L1 6635 6731 -729 5 1531 204 40 0 0 chrX 123994336 123994361 -42655935 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 5 1531 1459 330 45 12 chrX 123994361 123994954 -42655342 + Lx6 LINE L1 6455 7423 -37 5 1531 504 0 0 0 chrX 123994998 123995054 -42655242 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 1531 890 338 31 14 chrX 123995063 123995423 -42654873 - Lx7 LINE L1 -390 7306 6941 5 1531 1511 283 59 24 chrX 123995447 123995903 -42654393 - Lx7 LINE L1 -893 6803 6332 5 1531 2558 65 0 12 chrX 123995916 123996257 -42654039 + IAPLTR4 LTR ERVK 1 337 -8 5 1531 1297 308 55 35 chrX 123996265 123997294 -42653002 - Lx7 LINE L1 -1375 6321 5259 5 1531 1985 137 68 20 chrX 123997294 123997663 -42652633 - RLTR13D5 LTR ERVK 0 1023 445 5 1531 5612 128 3 0 chrX 123997663 123998551 -42651745 - L1Md_F LINE L1 -1848 4035 3145 5 1531 8715 126 6 1 chrX 123998562 124000000 -42650296 - L1Md_F LINE L1 -3246 2637 1192 5 1531 268 202 0 12 chrX 124000000 124000085 -42650211 - L1VL1 LINE L1 -5447 975 892 1 1531 1858 225 17 91 chrX 124000053 124000737 -42649559 - L1Md_F LINE L1 -5411 1208 549 2 1531 327 323 23 103 chrX 124000797 124001097 -42649199 - L1VL1 LINE L1 -6060 362 87 1 1531 628 160 8 0 chrX 124001152 124001271 -42649025 - L1_Mus2 LINE L1 -19 6547 6428 3 1531 13939 128 34 1 chrX 124001290 124003418 -42646878 + L1_Mus1 LINE L1 3592 5783 -100 4 1531 342 0 0 0 chrX 124003418 124003456 -42646840 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 5 1531 13939 126 14 6 chrX 124003456 124004230 -42646066 + L1_Mus1 LINE L1 5784 6564 -3 4 1531 1069 50 18 18 chrX 124004271 124004435 -42645861 + (GGAGAA)n Simple_repeat Simple_repeat 6 169 0 6 1531 3933 91 33 14 chrX 124004438 124005018 -42645278 - RLTR13D5 LTR ERVK -345 678 88 7 1531 1441 254 14 14 chrX 124005029 124005456 -42644840 - L1_Mur3 LINE L1 -758 5122 4696 8 1531 358 324 64 21 chrX 124005549 124005968 -42644328 - L1_Mur3 LINE L1 -2498 3382 2946 8 1531 483 318 17 51 chrX 124005997 124006219 -42644077 + ORR1C2 LTR MaLR 3 217 -142 9 1531 1055 217 40 191 chrX 124006246 124006622 -42643674 - MTC LTR MaLR -102 319 1 1 1531 622 259 18 31 chrX 124006622 124006783 -42643513 + ORR1C2 LTR MaLR 192 350 -34 9 1531 518 194 0 0 chrX 124006783 124006876 -42643420 + RLTR11B LTR ERVK 1 93 -360 1 1531 2222 140 64 13 chrX 124006895 124007287 -42643009 + RLTR22_Mur LTR ERVK 1 412 -1436 1 1531 2551 227 54 112 chrX 124007287 124008195 -42642101 - RLTR13A LTR ERVK 0 855 1 1 1531 1081 103 36 0 chrX 124008195 124008360 -42641936 + RLTR22_Mus LTR ERVK 414 584 -1224 1 1531 1469 109 0 34 chrX 124008602 124008839 -42641457 - L1_Mus2 LINE L1 0 6566 6338 1 1531 988 160 11 22 chrX 124009027 124009206 -42641090 + RLTR11B LTR ERVK 277 453 0 1 1531 1096 141 6 0 chrX 124009331 124009501 -42640795 + B2_Mm1t SINE B2 1 171 -22 1 1531 379 127 0 0 chrX 124009548 124009603 -42640693 + B2_Mm2 SINE B2 47 101 -94 1 1531 22 35 0 0 chrX 124009625 124009654 -42640642 + AT_rich Low_complexity Low_complexity 1 29 0 1 1531 879 308 52 24 chrX 124009654 124010079 -42640217 - L1_Mur3 LINE L1 -3044 2836 2400 8 1531 730 271 49 34 chrX 124010530 124010855 -42639441 - L1M2 LINE L1 -3151 2992 2663 1 1531 273 387 37 49 chrX 124010894 124010991 -42639305 - RSINE1 SINE B4 -3 162 65 2 1531 3958 146 61 17 chrX 124010991 124011766 -42638530 + RMER17D2 LTR ERVK 1 809 0 2 1531 273 387 37 49 chrX 124011766 124011831 -42638465 - RSINE1 SINE B4 -101 64 2 2 1531 353 363 27 0 chrX 124011834 124011980 -42638316 - ID_B1 SINE B4 -10 214 65 2 1531 32 26 0 0 chrX 124012097 124012136 -42638160 + AT_rich Low_complexity Low_complexity 1 39 0 2 1531 3491 224 55 14 chrX 124012321 124013042 -42637254 - Lx5 LINE L1 -148 6902 6152 2 1531 477 0 0 0 chrX 124013085 124013138 -42637158 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 1531 507 33 0 0 chrX 124013138 124013198 -42637098 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1531 1783 225 9 120 chrX 124013302 124013453 -42636843 - RLTR16 LTR ERVK 0 505 401 2 1531 530 29 15 0 chrX 124013453 124013521 -42636775 + (CA)n Simple_repeat Simple_repeat 2 70 0 2 1531 1783 225 9 120 chrX 124013521 124013909 -42636387 - RLTR16 LTR ERVK -105 400 26 2 1531 5294 244 37 20 chrX 124013918 124015731 -42634565 + Lx6 LINE L1 5293 7101 -359 2 1531 971 8 31 0 chrX 124015876 124016004 -42634292 + (TCTA)n Simple_repeat Simple_repeat 2 133 0 3 1531 595 257 0 0 chrX 124016049 124016162 -42634134 - B3 SINE B2 -86 130 18 3 1531 3380 165 19 11 chrX 124016162 124016222 -42634074 + L1_Mur2 LINE L1 4597 4657 -1220 3 1531 180 0 0 0 chrX 124016222 124016242 -42634054 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1531 3380 165 19 11 chrX 124016242 124016387 -42633909 + L1_Mur2 LINE L1 4658 4804 -1073 3 1531 2825 87 34 84 chrX 124016387 124016887 -42633409 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1531 3380 165 19 11 chrX 124016887 124017311 -42632985 + L1_Mur2 LINE L1 4805 5231 -646 3 1531 669 268 144 32 chrX 124017312 124017597 -42632699 + Lx2B LINE L1 6679 6995 -5 3 1531 29 28 0 0 chrX 124017597 124017633 -42632663 + AT_rich Low_complexity Low_complexity 1 36 0 3 1531 413 288 36 9 chrX 124018637 124018749 -42631547 + B3A SINE B2 2 116 -82 3 1531 411 38 0 0 chrX 124018752 124018805 -42631491 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1531 270 330 65 35 chrX 124019439 124019640 -42630656 - Lx8 LINE L1 0 7473 7267 3 1531 21 36 0 0 chrX 124019708 124019736 -42630560 + AT_rich Low_complexity Low_complexity 1 28 0 4 1531 18338 160 37 22 chrX 124020206 124021849 -42628447 - Lx LINE L1 -8 6646 4958 4 1531 1273 77 3 14 chrX 124021849 124022194 -42628102 + (TTCC)n Simple_repeat Simple_repeat 1 340 0 4 1531 6015 72 1 9 chrX 124022194 124023068 -42627228 - L1Md_F2 LINE L1 0 6582 5762 4 1531 797 76 8 48 chrX 124023072 124023196 -42627100 - B1_Mus1 SINE Alu -23 125 7 4 1531 404 206 16 144 chrX 124023084 124023209 -42627087 - MT2B LTR ERVL -337 264 156 4 1531 18338 194 31 38 chrX 124023196 124024507 -42625789 - Lx LINE L1 -929 4953 3573 4 1531 6789 41 0 7 chrX 124024507 124025342 -42624954 - L1Md_A LINE L1 0 6582 5754 4 1531 18338 194 31 38 chrX 124025342 124027192 -42623104 - Lx LINE L1 -2314 3572 1717 4 1531 461 17 0 0 chrX 124027193 124027251 -42623045 - MusHAL1 LINE L1 -2159 553 496 4 1531 24 0 0 0 chrX 124027376 124027400 -42622896 + AT_rich Low_complexity Low_complexity 1 24 0 4 1531 1074 84 0 0 chrX 124027629 124027771 -42622525 + B1_Mm SINE Alu 6 147 0 4 1531 271 229 0 0 chrX 124027772 124027833 -42622463 + A-rich Low_complexity Low_complexity 1 61 0 5 1531 274 284 46 0 chrX 124027970 124028079 -42622217 + L1MA6 LINE L1 2491 2604 -3539 5 1531 301 301 49 61 chrX 124028113 124028276 -42622020 + L1MA6 LINE L1 2585 2745 -3398 5 1531 829 187 0 0 chrX 124028306 124028456 -42621840 + RMER6C LTR ERVK 541 690 0 5 1531 562 279 104 27 chrX 124028472 124028930 -42621366 + L1MA6 LINE L1 5051 5542 -770 5 1531 1059 309 32 32 chrX 124028965 124029154 -42621142 - ORR1D2 LTR MaLR -23 347 152 5 1531 1553 35 5 10 chrX 124029154 124029354 -42620942 + L1Md_F3 LINE L1 6383 6581 -3 5 1531 1059 309 32 32 chrX 124029354 124029511 -42620785 - ORR1D2 LTR MaLR -219 151 2 5 1531 380 288 31 0 chrX 124029514 124029674 -42620622 + L1MA6 LINE L1 5552 5716 -584 5 1531 4971 122 7 0 chrX 124029682 124030433 -42619863 - L1_Mus2 LINE L1 -1 6565 5810 5 1531 28852 119 14 9 chrX 124030433 124036072 -42614224 - L1Md_F2 LINE L1 -194 6388 725 5 1531 334 270 53 53 chrX 124036080 124036213 -42614083 - L1Md_F2 LINE L1 -5813 803 671 5 1531 306 151 0 0 chrX 124036323 124036396 -42613900 + T-rich Low_complexity Low_complexity 1 73 0 5 1531 301 241 128 9 chrX 124036399 124036508 -42613788 - L1MEf LINE L1 -4132 2068 1947 5 1531 380 281 26 9 chrX 124036515 124036630 -42613666 - L1VL2 LINE L1 -6120 215 99 5 1531 22 0 0 0 chrX 124036664 124036686 -42613610 + AT_rich Low_complexity Low_complexity 1 22 0 6 1531 251 305 121 26 chrX 124036689 124036921 -42613375 + L1MA6 LINE L1 5876 6129 -171 5 1531 337 288 73 68 chrX 124037304 124037361 -42612935 - RMER10B LTR ERVL -4 394 218 6 1531 619 156 33 26 chrX 124037361 124037512 -42612784 - RMER17B LTR ERVK -495 463 312 6 1531 1273 234 20 136 chrX 124037510 124037729 -42612567 - RMER10B LTR ERVL -39 359 189 6 1531 753 43 0 0 chrX 124037729 124037822 -42612474 + (GGAGA)n Simple_repeat Simple_repeat 3 95 0 6 1531 1273 234 20 136 chrX 124037822 124038008 -42612288 - RMER10B LTR ERVL -210 188 1 6 1531 1307 214 43 4 chrX 124038246 124038523 -42611773 + Lx2B LINE L1 6712 6999 -1 6 1531 25 0 0 0 chrX 124039279 124039304 -42610992 + AT_rich Low_complexity Low_complexity 1 25 0 6 1531 216 97 0 0 chrX 124039368 124039399 -42610897 + (TTTC)n Simple_repeat Simple_repeat 1 31 0 6 1531 28 29 0 0 chrX 124039575 124039610 -42610686 + AT_rich Low_complexity Low_complexity 1 35 0 6 1531 181 30 91 0 chrX 124039610 124039643 -42610653 + (TATAA)n Simple_repeat Simple_repeat 4 39 0 6 1531 198 0 0 0 chrX 124039927 124039949 -42610347 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 6 1531 3143 256 32 38 chrX 124040024 124040785 -42609511 + Lx7 LINE L1 6575 7338 -358 7 1531 378 0 0 0 chrX 124040785 124040827 -42609469 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 7 1531 3143 256 32 38 chrX 124040827 124041022 -42609274 + Lx7 LINE L1 7339 7526 -170 7 1531 426 39 0 0 chrX 124041024 124041076 -42609220 + (TTC)n Simple_repeat Simple_repeat 3 54 0 7 1531 405 0 0 0 chrX 124041076 124041121 -42609175 + (CTA)n Simple_repeat Simple_repeat 2 46 0 7 1531 2125 158 8 5 chrX 124041128 124041497 -42608799 + Lx LINE L1 6285 6654 0 7 1531 23 0 0 0 chrX 124042239 124042262 -42608034 + AT_rich Low_complexity Low_complexity 1 23 0 7 1531 33 43 0 0 chrX 124042415 124042462 -42607834 + AT_rich Low_complexity Low_complexity 1 47 0 7 1531 2600 115 37 5 chrX 124042765 124043175 -42607121 - Lx3A LINE L1 0 6981 6559 7 1531 351 0 0 0 chrX 124043538 124043577 -42606719 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1531 25 0 0 0 chrX 124044130 124044155 -42606141 + AT_rich Low_complexity Low_complexity 1 25 0 7 1531 3425 20 2 10 chrX 124045012 124045411 -42604885 - MTA_Mm LTR MaLR 0 396 1 8 1531 1080 161 0 0 chrX 124045556 124045748 -42604548 + L1_Mur2 LINE L1 4092 4283 -1594 8 1531 8815 206 27 11 chrX 124045746 124048501 -42601795 + Lx2B LINE L1 4181 6995 -5 8 1531 420 292 136 58 chrX 124048969 124049521 -42600775 + L1MA4 LINE L1 4813 5407 -440 8 1531 2093 181 0 8 chrX 124049542 124049931 -42600365 - L1_Mus4 LINE L1 -839 5044 4659 8 1531 7017 129 8 1 chrX 124049934 124051493 -42598803 + L1_Mus4 LINE L1 5064 6630 -6 8 1531 582 225 15 23 chrX 124051499 124051631 -42598665 + B1_Mur1 SINE Alu 3 133 -16 8 1531 372 119 0 0 chrX 124051638 124051697 -42598599 + (CA)n Simple_repeat Simple_repeat 2 60 0 8 1531 183 114 0 0 chrX 124051700 124051735 -42598561 + (GA)n Simple_repeat Simple_repeat 2 36 0 8 1531 589 286 69 55 chrX 124051751 124052113 -42598183 + L1MA4 LINE L1 5518 5884 -416 8 1531 350 69 17 0 chrX 124052187 124052245 -42598051 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 8 1531 1181 62 0 0 chrX 124052557 124052702 -42597594 + B1_Mm SINE Alu 1 145 -2 8 1531 413 19 0 18 chrX 124052702 124052757 -42597539 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 9 1531 21 0 0 0 chrX 124052769 124052790 -42597506 + AT_rich Low_complexity Low_complexity 1 21 0 9 1531 252 143 0 0 chrX 124053028 124053070 -42597226 + (T)n Simple_repeat Simple_repeat 1 42 0 9 1531 405 395 4 4 chrX 124053070 124053296 -42597000 - RMER15 LTR ERVL -109 466 241 9 1531 22 56 0 0 chrX 124053723 124053759 -42596537 + AT_rich Low_complexity Low_complexity 1 36 0 9 1531 591 169 8 16 chrX 124054201 124054327 -42595969 + L1_Mus1 LINE L1 6442 6566 -1 9 1531 29 28 0 0 chrX 124054457 124054493 -42595803 + AT_rich Low_complexity Low_complexity 1 36 0 9 1531 280 292 77 10 chrX 124054521 124054715 -42595581 - L1MA7 LINE L1 -80 6211 6005 9 1531 419 266 45 78 chrX 124054825 124055094 -42595202 - L1M3b LINE L1 -1013 5331 5072 9 1531 645 291 63 16 chrX 124055110 124055191 -42595105 - L1M3b LINE L1 -2238 4106 4023 9 1531 1395 176 71 73 chrX 124055191 124055602 -42594694 + RMER17C LTR ERVK 1 410 0 9 1531 645 291 63 16 chrX 124055602 124055883 -42594413 - L1M3b LINE L1 -2322 4022 3727 9 1531 714 381 56 32 chrX 124056127 124056791 -42593505 - L1M3b LINE L1 -5601 680 1 9 1531 2996 82 5 7 chrX 124057399 124057818 -42592478 + L1_Mus1 LINE L1 6150 6567 0 1 1531 22 0 0 0 chrX 124057818 124057840 -42592456 + AT_rich Low_complexity Low_complexity 1 22 0 1 1531 2528 111 20 25 chrX 124058370 124058775 -42591521 - RLTR9D LTR ERVK 0 403 1 1 1531 372 162 27 13 chrX 124058775 124058850 -42591446 - ETnERV2-int LTR ERVK 0 7406 7331 1 1531 940 225 40 19 chrX 124059060 124059449 -42590847 - ETnERV2-int LTR ERVK -977 6429 6086 1 1531 8086 216 117 41 chrX 124059446 124060194 -42590102 - ETnERV2-int LTR ERVK -1230 4176 3318 1 1531 1902 178 9 54 chrX 124060194 124060622 -42589674 - RLTR9E LTR ERVK 0 409 1 1 1531 8375 153 38 16 chrX 124060622 124062384 -42587912 - ETnERV2-int LTR ERVK -3312 4094 1566 1 1531 34645 77 5 11 chrX 124062394 124068503 -42581793 - L1Md_F2 LINE L1 0 6582 513 1 1531 441 182 0 13 chrX 124068506 124068584 -42581712 - ETnERV2-int LTR ERVK -4834 2572 2496 1 1531 2866 163 76 43 chrX 124068611 124069526 -42580770 - ETnERV2-int LTR ERVK -5777 1629 321 1 1531 558 29 0 0 chrX 124069526 124069594 -42580702 + (TTTTA)n Simple_repeat Simple_repeat 4 71 0 1 1531 2866 275 42 3629 chrX 124069594 124069861 -42580435 - ETnERV2-int LTR ERVK -6324 1082 1078 1 1531 1554 75 9 0 chrX 124069861 124070074 -42580222 - L1Md_F2 LINE L1 -491 6091 5877 1 1531 3241 94 8 23 chrX 124070080 124070558 -42579738 + L1Md_F2 LINE L1 6098 6568 -14 1 1531 205 83 20 40 chrX 124070566 124070616 -42579680 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 1 1531 1978 124 96 40 chrX 124070762 124070846 -42579450 - RLTR9D LTR ERVK 0 403 323 1 1531 1637 42 0 0 chrX 124070846 124071039 -42579257 + B2_Mm1a SINE B2 1 193 0 1 1531 1978 124 96 40 chrX 124071039 124071331 -42578965 - RLTR9D LTR ERVK -81 322 6 1 1531 472 200 0 0 chrX 124071685 124071770 -42578526 - Lx6 LINE L1 -575 6885 6801 1 1531 1526 318 74 73 chrX 124072036 124073137 -42577159 + Lx5 LINE L1 5982 7050 0 1 1531 205 156 0 0 chrX 124073164 124073196 -42577100 + CT-rich Low_complexity Low_complexity 5 36 0 1 1531 262 275 54 21 chrX 124073299 124073392 -42576904 + MTEa LTR MaLR 280 375 -4 1 1531 404 326 14 14 chrX 124073771 124073914 -42576382 - MLT1C LTR MaLR -15 452 310 1 1531 310 339 0 0 chrX 124074005 124074114 -42576182 - MLT1C LTR MaLR -357 110 2 1 1531 25 31 0 0 chrX 124074745 124074777 -42575519 + AT_rich Low_complexity Low_complexity 1 32 0 1 1531 251 305 68 39 chrX 124075409 124075634 -42574662 + L1ME2 LINE L1 5848 6083 -361 1 1531 31 58 0 0 chrX 124075950 124076002 -42574294 + AT_rich Low_complexity Low_complexity 1 52 0 1 1531 756 260 46 49 chrX 124076419 124076743 -42573553 + L1_Mur3 LINE L1 683 1005 -6707 1 1531 1580 127 4 0 chrX 124076740 124076969 -42573327 - L1_Mm LINE L1 -280 5603 5374 1 1531 2696 109 17 15 chrX 124076969 124077377 -42572919 - RLTR9E LTR ERVK 0 409 1 1 1531 483 92 0 38 chrX 124077377 124077456 -42572840 - ETnERV2-int LTR ERVK 0 7406 7331 1 1531 1647 168 137 4 chrX 124077456 124077932 -42572364 - RLTR13D6 LTR ERVK -363 539 1 1 1531 1466 151 12 4 chrX 124077951 124078197 -42572099 - ETnERV3-int LTR ERVK -32 5776 5529 1 1531 4733 116 22 39 chrX 124078210 124079036 -42571260 - ETnERV2-int LTR ERVK -1172 6072 5297 1 1531 4138 135 41 21 chrX 124079031 124079855 -42570441 - ETnERV2-int LTR ERVK -3312 4094 3441 1 1531 5392 143 19 23 chrX 124080112 124081135 -42569161 - ETnERV2-int LTR ERVK -3958 3448 1995 1 1531 4644 137 86 35 chrX 124081159 124081735 -42568561 - ETnERV2-int LTR ERVK -5320 2086 1484 1 1531 249 57 0 0 chrX 124081735 124081770 -42568526 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1531 4644 137 86 35 chrX 124081770 124082160 -42568136 - ETnERV2-int LTR ERVK -5923 1483 1071 1 1531 868 233 121 37 chrX 124082170 124082518 -42567778 - ETnERV2-int LTR ERVK -2927 387 11 1 1531 2395 84 20 11 chrX 124082554 124082903 -42567393 - RLTR9E LTR ERVK -57 352 1 1 1531 7294 169 11 1 chrX 124082903 124084251 -42566045 - L1_Mur2 LINE L1 -504 5373 4012 1 1531 1809 108 0 0 chrX 124084251 124084511 -42565785 + L1_Mus4 LINE L1 5619 5878 -758 1 1531 1177 193 32 50 chrX 124084517 124084795 -42565501 + RLTR46 LTR ERVK 42 314 -6 1 1531 4504 128 1 6 chrX 124084803 124085480 -42564816 + L1_Mus4 LINE L1 5870 6543 -93 1 1531 4280 261 34 58 chrX 124085465 124086505 -42563791 + Lx7 LINE L1 6420 7440 -256 1 1531 339 25 0 0 chrX 124086505 124086545 -42563751 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1531 4280 261 34 58 chrX 124086545 124086813 -42563483 + Lx7 LINE L1 7441 7696 0 1 1531 225 310 36 94 chrX 124086880 124086910 -42563386 - B2_Mm2 SINE B2 -8 187 11 1 1531 444 331 19 44 chrX 124086910 124087068 -42563228 - RSINE1 SINE B4 0 165 12 1 1531 222 329 12 50 chrX 124087565 124087645 -42562651 - PB1D10 SINE Alu -13 104 28 1 1531 203 161 0 0 chrX 124087819 124087850 -42562446 + (TAG)n Simple_repeat Simple_repeat 1 31 0 1 1531 180 0 0 0 chrX 124088217 124088237 -42562059 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 1531 25 31 0 0 chrX 124088332 124088364 -42561932 + AT_rich Low_complexity Low_complexity 1 32 0 1 1531 21 36 0 0 chrX 124088425 124088453 -42561843 + AT_rich Low_complexity Low_complexity 1 28 0 1 1531 22 0 0 0 chrX 124088471 124088493 -42561803 + AT_rich Low_complexity Low_complexity 1 22 0 1 1531 316 338 75 19 chrX 124090342 124090502 -42559794 - L1MD LINE L1 -1949 4197 4029 1 1531 319 309 0 47 chrX 124090607 124090690 -42559606 + RSINE1 SINE B4 19 97 -68 1 1531 992 273 120 36 chrX 124090690 124091024 -42559272 + ORR1D2 LTR MaLR 1 362 -8 1 1531 240 330 0 0 chrX 124091073 124091176 -42559120 - L1M3 LINE L1 -1364 4776 4674 1 1531 366 23 0 0 chrX 124091269 124091312 -42558984 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 1531 246 62 0 0 chrX 124091341 124091373 -42558923 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1531 4169 36 0 0 chrX 124091641 124092134 -42558162 - L1Md_T LINE L1 -2 6580 6088 1 1531 1726 92 11 4 chrX 124092594 124092855 -42557441 + L1_Mus2 LINE L1 6303 6565 -1 1 1531 2553 199 104 14 chrX 124092873 124093516 -42556780 - L1_Mur2 LINE L1 -547 5330 4630 1 1531 12436 192 34 15 chrX 124093498 124095402 -42554894 - L1_Mur1 LINE L1 -418 5468 3492 1 1531 207 0 0 0 chrX 124095402 124095425 -42554871 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1531 12436 192 34 15 chrX 124095425 124095662 -42554634 - L1_Mur1 LINE L1 -2395 3491 3275 1 1531 3147 56 13 0 chrX 124095662 124096053 -42554243 - MTA_Mm LTR MaLR 0 396 1 1 1531 12436 192 34 15 chrX 124096053 124096654 -42553642 - L1_Mur1 LINE L1 -2612 3274 2675 1 1531 1402 190 3 16 chrX 124096688 124097009 -42553287 + MusHAL1 LINE L1 1928 2244 -468 1 1531 421 342 45 24 chrX 124097021 124097267 -42553029 + ERVL-int LTR ERVL 1929 2179 -3578 1 1531 315 0 0 0 chrX 124097571 124097606 -42552690 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 1531 438 139 0 0 chrX 124097606 124097678 -42552618 + (TA)n Simple_repeat Simple_repeat 2 73 0 1 1531 239 275 48 27 chrX 124098433 124098579 -42551717 + L1MA4 LINE L1 6016 6164 -136 1 1531 227 321 18 30 chrX 124098666 124098830 -42551466 + L1M4 LINE L1 4614 4775 -1371 1 1531 258 56 0 0 chrX 124098917 124098953 -42551343 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1 1531 241 294 10 19 chrX 124099254 124099358 -42550938 + L1M4 LINE L1 5185 5287 -859 1 1531 312 317 42 6 chrX 124099484 124099652 -42550644 + L1M4 LINE L1 5549 5722 -456 1 1531 264 59 0 0 chrX 124099801 124099835 -42550461 + (GA)n Simple_repeat Simple_repeat 1 34 0 1 1531 25 31 0 0 chrX 124100196 124100228 -42550068 + AT_rich Low_complexity Low_complexity 1 32 0 1 1531 329 278 10 30 chrX 124100571 124100671 -42549625 + MLT1G3 LTR MaLR 485 582 -13 1 1531 299 348 64 68 chrX 124101173 124101545 -42548751 - L1MC1 LINE L1 -11 6322 5946 1 1531 643 306 0 37 chrX 124101545 124101762 -42548534 - B3 SINE B2 -5 211 3 1 1531 299 348 64 68 chrX 124101762 124101950 -42548346 - L1MC1 LINE L1 -388 5945 5764 1 1531 529 326 150 13 chrX 124102103 124102330 -42547966 - MLT2B3 LTR ERVL -42 512 255 1 1531 2879 221 46 29 chrX 124102345 124103283 -42547013 + L1Md_F LINE L1 277 1282 -5378 1 1531 17966 190 113 10 chrX 124103272 124105425 -42544871 + L1Md_F2 LINE L1 1220 3486 -2400 1 1531 363 119 0 0 chrX 124105425 124105492 -42544804 + (CATA)n Simple_repeat Simple_repeat 2 68 0 1 1531 17966 169 87 12 chrX 124105492 124107860 -42542436 + L1Md_F2 LINE L1 3487 6174 -408 1 1531 377 100 86 0 chrX 124107856 124107926 -42542370 + L1_Mus1 LINE L1 5738 5813 -754 1 1531 25394 108 60 16 chrX 124107938 124110785 -42539511 + L1Md_F2 LINE L1 481 3476 -2407 1 1531 1017 170 45 133 chrX 124110785 124111138 -42539158 + RLTRETN_Mm LTR ERVK 1 322 0 1 1531 25394 90 14 4 chrX 124111138 124111858 -42538438 + L1Md_F2 LINE L1 3477 4208 -1675 1 1531 552 89 0 0 chrX 124111858 124111937 -42538359 + (TA)n Simple_repeat Simple_repeat 2 80 0 1 1531 15524 87 14 7 chrX 124111937 124113311 -42536985 + L1Md_F2 LINE L1 4209 5584 -299 1 1531 6284 129 9 16 chrX 124113312 124114296 -42536000 + L1Md_F2 LINE L1 5587 6563 -19 1 1531 4953 99 61 1 chrX 124114304 124115042 -42535254 + L1_Mus2 LINE L1 5785 6566 0 1 1531 959 322 7 20 chrX 124115081 124115376 -42534920 - MLT2B5 LTR ERVL -391 326 36 1 1531 23 0 0 0 chrX 124115474 124115497 -42534799 + AT_rich Low_complexity Low_complexity 1 23 0 1 1531 318 50 0 0 chrX 124116050 124116090 -42534206 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 1531 37503 48 5 4 chrX 124116141 124122438 -42527858 - L1Md_T LINE L1 0 6585 187 1 1531 1332 318 53 14 chrX 124122532 124123094 -42527202 + Lx8 LINE L1 6463 7046 -427 1 1531 324 0 0 0 chrX 124123546 124123582 -42526714 + (TC)n Simple_repeat Simple_repeat 2 37 0 1 1531 493 216 0 15 chrX 124123582 124123718 -42526578 + (TA)n Simple_repeat Simple_repeat 2 135 0 1 1531 261 140 0 39 chrX 124123853 124123905 -42526391 + MER4B-int LTR ERV1 1150 1199 -5559 1 1531 363 78 0 0 chrX 124123969 124124020 -42526276 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1531 306 0 0 0 chrX 124124034 124124068 -42526228 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1531 221 130 0 42 chrX 124124148 124124196 -42526100 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 1531 239 363 30 65 chrX 124124340 124124508 -42525788 - RLTR8 LTR ERVK 0 365 204 1 1532 1959 116 18 25 chrX 124125263 124125589 -42524707 - RMER16-int LTR ERVK -856 4550 4227 1 1532 7672 40 3 3 chrX 124125603 124126537 -42523759 - L1Md_F2 LINE L1 0 6582 5649 1 1532 9257 120 24 32 chrX 124126550 124128105 -42522191 - RMER16-int LTR ERVK -1194 4212 2670 1 1532 1345 258 110 42 chrX 124128105 124128567 -42521729 + RMER16 LTR ERVK 1 533 0 1 1532 2260 178 126 4 chrX 124128568 124129060 -42521236 - RMER16-int LTR ERVK -2732 2674 2123 1 1532 751 283 194 46 chrX 124129060 124129405 -42520891 + RMER19C LTR ERVK 214 609 -2 1 1532 961 347 44 20 chrX 124129606 124130215 -42520081 - RMER15-int LTR ERVL -229 4770 4147 1 1532 1358 346 60 54 chrX 124130237 124131414 -42518882 - RMER15-int LTR ERVL -939 4060 2877 1 1532 2245 250 29 24 chrX 124131417 124132074 -42518222 + RLTR22_Mur LTR ERVK 3 662 -1186 1 1532 1446 176 27 9 chrX 124132100 124132440 -42517856 - Lx4A LINE L1 -977 6081 5783 1 1532 10133 85 19 7 chrX 124132562 124134896 -42515400 - L1Md_F2 LINE L1 -60 6940 4561 1 1532 640 185 0 0 chrX 124134896 124135004 -42515292 - Lx3C LINE L1 -365 6611 6504 1 1532 28180 131 25 8 chrX 124135118 124141420 -42508876 - L1_Mus1 LINE L1 0 6567 155 1 1532 7161 171 84 7 chrX 124141457 124143926 -42506370 - Lx4A LINE L1 -218 6840 4137 1 1532 316 299 26 0 chrX 124143926 124144003 -42506293 - B1_Mur4 SINE Alu -70 80 2 1 1532 3198 222 29 19 chrX 124144231 124145019 -42505277 + L1VL4 LINE L1 194 989 -5313 1 1532 927 159 14 3 chrX 124145003 124145186 -42505110 - Lx5 LINE L1 -1361 5689 5504 1 1532 5218 94 98 0 chrX 124145188 124145952 -42504344 + L1_Mus3 LINE L1 5674 6512 -126 1 1532 8940 167 29 17 chrX 124145946 124147137 -42503159 + MusHAL1 LINE L1 401 1614 -1098 2 1532 495 48 0 0 chrX 124147137 124147199 -42503097 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 1532 477 0 0 0 chrX 124147199 124147251 -42503045 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1532 8940 167 29 17 chrX 124147251 124147454 -42502842 + MusHAL1 LINE L1 1615 1820 -892 2 1532 3319 79 20 0 chrX 124147454 124147896 -42502400 - L1_Mus1 LINE L1 -1 6566 6116 2 1532 8940 167 29 17 chrX 124147896 124148338 -42501958 + MusHAL1 LINE L1 1821 2259 -453 2 1532 7652 65 11 3 chrX 124148336 124149339 -42500957 + L1Md_F2 LINE L1 4504 5514 -369 2 1532 7130 59 33 6 chrX 124149342 124150284 -42500012 + L1Md_F2 LINE L1 5604 6570 -12 2 1532 1798 181 38 3 chrX 124150284 124150656 -42499640 + L1_Mur2 LINE L1 3462 3846 -2031 2 1532 3436 224 27 22 chrX 124151075 124151882 -42498414 - Lx4B LINE L1 -18 7040 6230 2 1532 680 355 50 23 chrX 124152288 124152686 -42497610 - RMER15-int LTR ERVL -3374 1625 1217 2 1532 405 148 0 0 chrX 124154299 124154380 -42495916 + (TG)n Simple_repeat Simple_repeat 2 82 0 2 1532 455 232 0 0 chrX 124154509 124154591 -42495705 - PB1D9 SINE Alu -38 82 1 2 1532 286 330 78 26 chrX 124154591 124154622 -42495674 - ID_B1 SINE B4 -62 160 42 2 1532 2950 26 14 0 chrX 124154622 124154972 -42495324 + L1Md_F3 LINE L1 5957 6311 -273 2 1532 429 156 0 0 chrX 124155378 124155455 -42494841 + (CA)n Simple_repeat Simple_repeat 2 78 0 2 1532 213 241 0 0 chrX 124155445 124155499 -42494797 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 2 1532 222 128 0 0 chrX 124155857 124155896 -42494400 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1532 485 324 75 9 chrX 124155906 124156118 -42494178 + Lx9 LINE L1 6344 6569 -1075 2 1532 292 333 0 15 chrX 124156285 124156416 -42493880 - ERVL-int LTR ERVL -2954 2531 2403 2 1532 738 109 0 0 chrX 124156422 124156532 -42493764 + (TTTC)n Simple_repeat Simple_repeat 3 112 0 2 1532 21 0 0 0 chrX 124156652 124156673 -42493623 + AT_rich Low_complexity Low_complexity 1 21 0 2 1532 372 366 20 28 chrX 124156905 124157155 -42493141 - ERVL-int LTR ERVL -4084 1673 1426 2 1532 432 0 0 0 chrX 124157209 124157257 -42493039 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 1532 34 24 0 0 chrX 124157513 124157554 -42492742 + AT_rich Low_complexity Low_complexity 1 41 0 2 1532 281 188 0 101 chrX 124157851 124157940 -42492356 + Lx5 LINE L1 2129 2208 -3669 2 1532 333 62 46 0 chrX 124157940 124158005 -42492291 + (CAAAAA)n Simple_repeat Simple_repeat 2 69 0 2 1532 657 217 0 18 chrX 124158007 124158171 -42492125 + Lx5 LINE L1 2199 2359 -3518 2 1532 6814 206 27 34 chrX 124158181 124158375 -42491921 + Lx5 LINE L1 4114 4297 -1580 2 1532 252 0 0 0 chrX 124158375 124158403 -42491893 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 1532 6814 206 27 34 chrX 124158403 124159894 -42490402 + Lx5 LINE L1 4298 5786 -91 2 1532 8136 139 18 14 chrX 124159918 124162214 -42488082 + Lx3A LINE L1 277 2583 -3303 2 1532 1570 156 44 16 chrX 124162195 124162414 -42487882 + Lx3A LINE L1 3261 3491 -2395 2 1532 198 0 0 0 chrX 124162414 124162436 -42487860 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 2 1532 1570 156 44 16 chrX 124162436 124162535 -42487761 + Lx3A LINE L1 3492 3587 -2299 2 1532 1832 117 3 0 chrX 124162537 124162827 -42487469 + Lx3A LINE L1 3945 4235 -1651 2 1532 7858 153 28 15 chrX 124162835 124164352 -42485944 + Lx3A LINE L1 5457 6970 -11 2 1532 1333 45 0 22 chrX 124164354 124164537 -42485759 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 2 1532 289 250 38 0 chrX 124164577 124164657 -42485639 + L1MA5 LINE L1 6200 6282 -18 2 1532 4424 242 30 8 chrX 124164721 124165735 -42484561 + Lx5 LINE L1 5792 6827 -223 2 1532 289 279 37 25 chrX 124165899 124165980 -42484316 + B4A SINE B4 10 91 -201 2 1532 315 71 0 0 chrX 124166093 124166135 -42484161 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1532 297 313 113 20 chrX 124166381 124166531 -42483765 + RMER15 LTR ERVL 407 570 -5 2 1532 1285 339 87 58 chrX 124166977 124167042 -42483254 - Lx6 LINE L1 -27 7433 7370 2 1532 714 44 0 0 chrX 124167042 124167132 -42483164 + (CA)n Simple_repeat Simple_repeat 2 91 0 2 1532 1285 313 89 47 chrX 124167132 124168044 -42482252 - Lx6 LINE L1 -91 7369 6200 2 1532 1062 137 68 5 chrX 124168050 124168255 -42482041 + Lx3_Mus LINE L1 6792 7009 0 2 1532 749 324 71 9 chrX 124168255 124168607 -42481689 - RMER19A LTR ERVK -97 640 225 2 1532 468 335 21 43 chrX 124169738 124169925 -42480371 + RMER15-int LTR ERVL 4302 4484 -515 2 1532 1819 236 74 11 chrX 124169966 124170464 -42479832 - RMER4B LTR ERVK 0 585 33 2 1532 3039 184 39 4 chrX 124170465 124171027 -42479269 + Lx4A LINE L1 6476 7057 -1 2 1532 220 154 39 0 chrX 124171041 124171093 -42479203 + (TTTG)n Simple_repeat Simple_repeat 2 55 0 2 1532 255 238 0 0 chrX 124171385 124171448 -42478848 + T-rich Low_complexity Low_complexity 1 63 0 2 1532 314 123 0 17 chrX 124171760 124171818 -42478478 + (TG)n Simple_repeat Simple_repeat 1 57 0 2 1532 539 208 185 51 chrX 124171871 124172028 -42478268 + RMER21B LTR ERV1 3 180 -662 2 1532 445 295 148 27 chrX 124172049 124172272 -42478024 + RMER21B LTR ERV1 316 565 -277 2 1532 324 313 104 25 chrX 124173036 124173566 -42476730 + L1MC4 LINE L1 7294 7865 -177 2 1532 546 16 0 0 chrX 124173591 124173654 -42476642 + (CA)n Simple_repeat Simple_repeat 2 64 0 2 1532 198 0 0 0 chrX 124173654 124173675 -42476621 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 1532 24 0 0 0 chrX 124173763 124173787 -42476509 + AT_rich Low_complexity Low_complexity 1 24 0 2 1532 1033 185 25 138 chrX 124174170 124174533 -42475763 + RLTRETN_Mm LTR ERVK 1 322 0 2 1532 1222 165 3 113 chrX 124174535 124174836 -42475460 + ETnERV2-int LTR ERVK 3 270 -4574 2 1532 294 29 0 0 chrX 124174841 124174876 -42475420 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2 1532 186 128 0 0 chrX 124174881 124174920 -42475376 + (A)n Simple_repeat Simple_repeat 1 39 0 2 1532 5842 125 15 75 chrX 124174920 124176021 -42474275 + ETnERV2-int LTR ERVK 272 1306 -3538 2 1532 2930 147 39 10 chrX 124176035 124176304 -42473992 + ETnERV2-int LTR ERVK 2494 2767 -4639 2 1532 231 36 0 0 chrX 124176304 124176332 -42473964 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2 1532 4078 131 16 24 chrX 124176332 124177876 -42472420 + ETnERV2-int LTR ERVK 1730 3402 -2004 2 1532 6121 164 25 8 chrX 124177895 124178868 -42471428 + ETnERV2-int LTR ERVK 6222 7210 -196 2 1532 367 233 167 16 chrX 124178869 124179086 -42471210 + RLTR13D6 LTR ERVK 161 440 -462 2 1532 533 148 79 36 chrX 124179087 124179227 -42471069 + MMETn-int LTR ERVK 4699 4844 0 2 1532 1047 186 37 123 chrX 124179227 124179577 -42470719 + RLTRETN_Mm LTR ERVK 1 320 -2 2 1532 1376 147 4 29 chrX 124179854 124180099 -42470197 + RLTR11B LTR ERVK 4 242 -211 2 1532 1060 266 39 33 chrX 124180099 124180488 -42469808 + MYSERV16_I-int LTR ERVK 353 743 -1583 2 1532 3796 148 106 23 chrX 124180822 124181569 -42468727 - RMER17D2 LTR ERVK 0 809 1 2 1532 1858 200 16 50 chrX 124181590 124181762 -42468534 + L1_Mur1 LINE L1 877 1043 -5941 2 1532 1559 207 75 0 chrX 124181762 124182081 -42468215 - ORR1A1 LTR MaLR -1 345 3 2 1532 2085 200 16 50 chrX 124182081 124182287 -42468009 + L1_Mur1 LINE L1 1044 1248 -5736 2 1532 1160 129 10 36 chrX 124182287 124182480 -42467816 + B2_Mm2 SINE B2 1 188 -7 2 1532 2085 206 46 25 chrX 124182480 124182950 -42467346 + L1_Mur1 LINE L1 1249 1732 -4154 2 1532 2913 217 62 1 chrX 124182955 124183647 -42466649 + L1_Mur1 LINE L1 5020 5753 -124 2 1532 4363 179 41 2 chrX 124183640 124184550 -42465746 - L1_Mur2 LINE L1 -1112 4765 3821 2 1532 4236 174 76 8 chrX 124184550 124185378 -42464918 + RMER17B LTR ERVK 1 884 -74 2 1532 1936 184 3 0 chrX 124185378 124185486 -42464810 - L1VL2 LINE L1 -415 5468 5361 2 1532 410 0 20 0 chrX 124185486 124185536 -42464760 + (TTTA)n Simple_repeat Simple_repeat 4 54 0 2 1532 1936 184 3 0 chrX 124185536 124185797 -42464499 - L1VL2 LINE L1 -523 5360 5099 2 1532 2882 108 12 2 chrX 124185807 124186223 -42464073 - L1_Mus2 LINE L1 0 6566 6147 2 1532 4275 115 14 2 chrX 124186223 124187186 -42463110 + L1_Mus2 LINE L1 5167 6137 -429 2 1532 309 186 0 0 chrX 124187181 124187240 -42463056 - L1VL2 LINE L1 -771 5112 5054 2 1532 14998 172 9 53 chrX 124187240 124188100 -42462196 - L1VL2 LINE L1 -1527 4356 3488 2 1532 1107 80 0 0 chrX 124188100 124188251 -42462045 + (TTTC)n Simple_repeat Simple_repeat 2 152 0 2 1532 14998 172 10 53 chrX 124188251 124190716 -42459580 - L1VL2 LINE L1 -2396 3487 1167 2 1532 2272 55 3 0 chrX 124190716 124191007 -42459289 - L1Md_A LINE L1 0 6582 6291 2 1532 1137 71 0 0 chrX 124191007 124191147 -42459149 - B1_Mm SINE Alu -7 140 1 2 1532 4036 198 59 24 chrX 124191147 124191891 -42458405 - L1VL2 LINE L1 -5468 1166 399 2 1532 2320 168 50 0 chrX 124191897 124192374 -42457922 - MusHAL1 LINE L1 -1198 1514 1014 2 1532 2219 92 15 0 chrX 124192383 124192709 -42457587 - L1_Mus1 LINE L1 0 6567 6237 2 1532 28 29 0 0 chrX 124193509 124193544 -42456752 + AT_rich Low_complexity Low_complexity 1 35 0 2 1532 1954 169 153 36 chrX 124193755 124194253 -42456043 + RMER16-int LTR ERVK 255 810 -4596 2 1532 609 200 25 0 chrX 124194268 124194388 -42455908 + RMER16-int LTR ERVK 938 1060 -5077 2 1532 9957 153 47 20 chrX 124194409 124196407 -42453889 + ETnERV2-int LTR ERVK 2935 4678 -2728 2 1532 3128 69 0 0 chrX 124196408 124196813 -42453483 + ETnERV2-int LTR ERVK 5358 5762 -1644 2 1532 5452 165 70 61 chrX 124196791 124198260 -42452036 + RLTR45-int LTR ERVK 3894 5907 -1337 2 1532 1272 50 43 1 chrX 124198285 124198481 -42451815 + RLTR13D5 LTR ERVK 291 509 -524 2 1532 436 297 24 6 chrX 124198725 124198891 -42451405 + RLTR45-int LTR ERVK 6356 6524 -720 2 1532 419 336 13 0 chrX 124198942 124199091 -42451205 + RLTR45-int LTR ERVK 6496 6646 -760 2 1532 23591 142 10 65 chrX 124199881 124203655 -42446641 - L1Md_F2 LINE L1 -366 6642 2592 2 1532 725 114 46 0 chrX 124203655 124203786 -42446510 - L1Md_F2 LINE L1 -3 6579 6443 2 1532 23591 161 13 72 chrX 124203786 124205943 -42444353 - L1Md_F2 LINE L1 -3292 2591 742 2 1532 3739 117 2 12 chrX 124206292 124206539 -42443757 - L1_Mus4 LINE L1 -495 6141 5901 2 1532 3584 141 27 56 chrX 124206539 124207312 -42442984 - RMER17A LTR ERVK 0 751 1 2 1532 4965 168 7 25 chrX 124207312 124208371 -42441925 - L1_Mus4 LINE L1 -736 5900 4864 2 1532 1195 198 87 0 chrX 124208364 124208616 -42441680 + Lx LINE L1 6172 6445 -209 2 1532 1759 284 88 5 chrX 124209230 124209836 -42440460 + Lx9 LINE L1 6776 7431 -213 2 1532 327 25 0 0 chrX 124209857 124209897 -42440399 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1532 27 29 0 0 chrX 124209992 124210026 -42440270 + AT_rich Low_complexity Low_complexity 1 34 0 2 1532 857 300 37 80 chrX 124210218 124210423 -42439873 + MTE-int LTR MaLR 39 231 -1349 2 1532 822 124 132 0 chrX 124210423 124210552 -42439744 - B1_Mm SINE Alu 0 147 2 2 1532 857 300 37 80 chrX 124210552 124210697 -42439599 + MTE-int LTR MaLR 232 374 -1206 2 1532 1302 322 186 21 chrX 124210678 124211462 -42438834 + MTE-int LTR MaLR 480 1521 -59 2 1532 688 298 55 114 chrX 124211504 124211871 -42438425 + MTE2a LTR MaLR 1 345 -34 2 1532 342 0 0 0 chrX 124212024 124212062 -42438234 + (CTA)n Simple_repeat Simple_repeat 1 38 0 2 1532 222 355 112 0 chrX 124212250 124212357 -42437939 - PB1D9 SINE Alu 0 120 2 2 1532 587 312 39 15 chrX 124212447 124212652 -42437644 - MTD LTR MaLR -8 411 202 2 1532 1406 98 14 14 chrX 124212652 124212870 -42437426 - L1_Mus3 LINE L1 -5 6633 6416 2 1532 244 85 0 0 chrX 124212971 124213008 -42437288 + Lx2B LINE L1 5647 5683 -1290 2 1532 2782 61 0 32 chrX 124213053 124213427 -42436869 - L1Md_F2 LINE L1 -19 6563 6202 2 1532 2761 70 38 0 chrX 124213428 124213797 -42436499 + L1_Mus2 LINE L1 5676 6058 -508 2 1532 24 32 0 0 chrX 124213806 124213837 -42436459 + AT_rich Low_complexity Low_complexity 1 31 0 2 1532 267 348 40 5 chrX 124214081 124214280 -42436016 + Lx LINE L1 3864 4069 -2077 2 1532 6206 146 38 13 chrX 124214291 124215819 -42434477 + Lx LINE L1 5101 6650 -4 2 1532 420 242 64 33 chrX 124215815 124216059 -42434237 + L1M4 LINE L1 5152 5404 -1040 2 1532 361 382 63 75 chrX 124216062 124216396 -42433900 - ORR1E LTR MaLR -12 347 18 2 1532 654 282 97 27 chrX 124218339 124218638 -42431658 + RMER5 LTR ERV1 33 352 -182 2 1532 857 184 7 7 chrX 124218641 124218928 -42431368 + GA-rich Low_complexity Low_complexity 1 286 0 2 1532 691 216 89 6 chrX 124218931 124219099 -42431197 + RMER5 LTR ERV1 344 525 -9 2 1532 978 290 66 0 chrX 124219159 124219445 -42430851 + MTD LTR MaLR 96 400 -19 2 1532 1904 206 139 31 chrX 124219531 124220043 -42430253 - RMER2 LTR ERV1 0 567 1 2 1532 216 67 0 0 chrX 124220338 124220368 -42429928 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1532 43 35 0 0 chrX 124220368 124220425 -42429871 + AT_rich Low_complexity Low_complexity 1 57 0 3 1532 337 186 17 0 chrX 124221060 124221119 -42429177 + Lx9 LINE L1 6465 6524 -1120 3 1532 3893 131 133 1 chrX 124221225 124221954 -42428342 + Lx3B LINE L1 6147 6971 -2 3 1532 31 68 0 0 chrX 124221962 124222021 -42428275 + AT_rich Low_complexity Low_complexity 1 59 0 3 1532 22 0 0 0 chrX 124222260 124222282 -42428014 + AT_rich Low_complexity Low_complexity 1 22 0 3 1532 35 24 0 0 chrX 124222825 124222867 -42427429 + AT_rich Low_complexity Low_complexity 1 42 0 3 1532 2133 47 11 28 chrX 124222941 124223225 -42427071 + L1_Mus1 LINE L1 6289 6567 0 3 1532 1146 76 7 0 chrX 124223244 124223389 -42426907 + B1_Mm SINE Alu 1 146 -1 3 1532 220 231 28 0 chrX 124223390 124223476 -42426820 + A-rich Low_complexity Low_complexity 1 88 0 3 1532 3508 25 0 0 chrX 124223694 124224090 -42426206 - MTA_Mm LTR MaLR 0 396 1 3 1532 9428 24 2 0 chrX 124224090 124225186 -42425110 - MTA_Mm-int LTR MaLR 0 1098 1 3 1532 3522 23 0 0 chrX 124225186 124225582 -42424714 - MTA_Mm LTR MaLR 0 396 1 3 1532 210 118 0 0 chrX 124226338 124226372 -42423924 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 3 1532 24 0 0 0 chrX 124227514 124227538 -42422758 + AT_rich Low_complexity Low_complexity 1 24 0 3 1532 21179 120 6 29 chrX 124227538 124231954 -42418342 - L1_Mus2 LINE L1 -1 6565 2247 3 1532 352 173 2 1 chrX 124231950 124232045 -42418251 - L1_Mm LINE L1 -2435 3442 3347 3 1532 225 65 0 0 chrX 124233282 124233313 -42416983 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1532 185 274 78 69 chrX 124233785 124233887 -42416409 + L4 LINE RTE 1375 1477 -552 3 1532 180 0 0 0 chrX 124234530 124234550 -42415746 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 1532 1146 22 0 0 chrX 124234550 124234686 -42415610 + (GA)n Simple_repeat Simple_repeat 1 137 0 3 1532 256 267 19 19 chrX 124235176 124235279 -42415017 + RNERVK23-int LTR ERVK 5106 5175 -3042 3 1532 1055 135 84 0 chrX 124236591 124236769 -42413527 + B2_Mm2 SINE B2 3 195 0 3 1532 413 147 244 35 chrX 124237476 124237557 -42412739 + Lx9 LINE L1 7406 7519 -125 3 1532 2416 106 76 90 chrX 124237557 124238046 -42412250 - RLTR45 LTR ERVK 0 482 1 3 1532 413 147 244 35 chrX 124238046 124238161 -42412135 + Lx9 LINE L1 7520 7643 -1 3 1532 1254 249 118 3 chrX 124238717 124239039 -42411257 - ORR1B2 LTR MaLR -8 359 1 3 1532 658 270 175 19 chrX 124239040 124239365 -42410931 + RMER5 LTR ERV1 157 532 -2 3 1532 25223 141 11 18 chrX 124239602 124245494 -42404802 + L1_Mus1 LINE L1 705 6553 -14 3 1532 21 36 0 0 chrX 124245797 124245825 -42404471 + AT_rich Low_complexity Low_complexity 1 28 0 3 1532 540 111 0 0 chrX 124246287 124246377 -42403919 + (CA)n Simple_repeat Simple_repeat 1 90 0 3 1532 1100 29 7 0 chrX 124246407 124246543 -42403753 + (TAGA)n Simple_repeat Simple_repeat 1 137 0 3 1532 357 285 9 9 chrX 124247419 124247544 -42402752 - ORR1B2-int LTR MaLR -1384 125 1 3 1532 926 264 68 0 chrX 124247544 124247779 -42402517 - ORR1B2 LTR MaLR 0 384 134 3 1532 3749 269 76 37 chrX 124247772 124248965 -42401331 + ORR1D-int LTR MaLR 131 1370 0 3 1532 1935 154 15 9 chrX 124248999 124249339 -42400957 - RLTR15 LTR ERVK -17 342 1 3 1532 731 280 36 16 chrX 124249401 124249706 -42400590 - MYSERV6-int LTR ERVK -601 8358 8048 3 1532 546 222 12 30 chrX 124249704 124249871 -42400425 - MYSERV16_I-int LTR ERVK -1164 1162 999 3 1532 228 239 43 29 chrX 124249871 124249940 -42400356 - RMER4A LTR ERVK -84 382 313 3 1532 1867 267 47 58 chrX 124249946 124250867 -42399429 - MYSERV16_I-int LTR ERVK -1414 912 2 3 1532 208 70 0 44 chrX 124250892 124250937 -42399359 + (TTTTTG)n Simple_repeat Simple_repeat 1 43 0 3 1532 438 183 189 61 chrX 124251709 124251889 -42398407 - MYSERV6-int LTR ERVK -2303 6656 6454 3 1532 919 82 14 7 chrX 124252587 124252734 -42397562 + (TTTC)n Simple_repeat Simple_repeat 3 150 0 3 1532 1001 193 34 5 chrX 124252753 124252961 -42397335 - Lx2 LINE L1 -13 6984 6771 3 1532 3007 155 6 2 chrX 124252961 124253485 -42396811 - Lx2 LINE L1 -359 6638 6113 3 1532 642 332 14 47 chrX 124253673 124253765 -42396531 - B3 SINE B2 -5 211 124 3 1532 2112 112 45 0 chrX 124253765 124254078 -42396218 + ORR1A2 LTR MaLR 1 327 0 3 1532 642 332 14 47 chrX 124254078 124254200 -42396096 - B3 SINE B2 -93 123 4 3 1532 225 0 0 0 chrX 124254760 124254785 -42395511 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 1532 3082 184 47 5 chrX 124254843 124255442 -42394854 - Lx LINE L1 -7 6647 6024 3 1532 536 62 0 90 chrX 124255442 124255531 -42394765 - L1_Mus1 LINE L1 -180 6387 6307 3 1533 186 43 0 0 chrX 124256923 124256946 -42393350 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1533 10940 104 29 9 chrX 124257185 124259711 -42390585 + L1Md_F LINE L1 388 2964 -2919 3 1533 36181 31 0 0 chrX 124259716 124266309 -42383987 - L1Md_T LINE L1 0 6585 1 3 1533 13965 85 8 38 chrX 124266312 124268526 -42381770 + L1Md_F LINE L1 2953 5101 -782 3 1533 2804 96 55 7 chrX 124268526 124268945 -42381351 + L1Md_F2 LINE L1 6143 6581 -1 3 1533 1096 109 0 0 chrX 124269741 124269888 -42380408 + B1_Mus2 SINE Alu 1 147 0 3 1533 555 29 0 0 chrX 124269891 124269960 -42380336 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 1533 233 348 0 21 chrX 124269968 124270062 -42380234 - Tigger5 DNA MER2_type -2235 171 80 3 1533 312 27 0 0 chrX 124270081 124270118 -42380178 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 1533 246 396 31 43 chrX 124270312 124270473 -42379823 - ORR1E LTR MaLR -167 192 34 3 1533 306 0 0 0 chrX 124270843 124270877 -42379419 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 1533 223 106 42 21 chrX 124271161 124271209 -42379087 + CT-rich Low_complexity Low_complexity 3 51 0 3 1533 647 252 9 14 chrX 124271271 124271631 -42378665 + CT-rich Low_complexity Low_complexity 1 358 0 3 1533 197 306 0 16 chrX 124271796 124271919 -42378377 + GA-rich Low_complexity Low_complexity 4 124 0 3 1533 470 16 32 0 chrX 124271970 124272032 -42378264 + (GAAA)n Simple_repeat Simple_repeat 4 67 0 3 1533 342 333 8 28 chrX 124272047 124272349 -42377947 + GA-rich Low_complexity Low_complexity 1 296 0 3 1533 405 58 0 0 chrX 124272353 124272405 -42377891 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 1533 234 336 8 15 chrX 124272498 124272628 -42377668 + GA-rich Low_complexity Low_complexity 2 130 0 3 1533 224 154 0 19 chrX 124272919 124272972 -42377324 + CT-rich Low_complexity Low_complexity 1 52 0 3 1533 377 365 6 6 chrX 124273029 124273208 -42377088 + GA-rich Low_complexity Low_complexity 2 180 0 3 1533 207 361 18 6 chrX 124273238 124273408 -42376888 + (CAGAGA)n Simple_repeat Simple_repeat 5 176 0 3 1533 365 335 0 22 chrX 124273340 124273520 -42376776 + GA-rich Low_complexity Low_complexity 1 176 0 3 1533 1442 227 50 13 chrX 124273973 124274353 -42375943 - ORR1B1 LTR MaLR 0 394 1 3 1533 3117 218 61 102 chrX 124274353 124275318 -42374978 - ORR1B1-int LTR MaLR 0 1963 1038 3 1533 567 0 0 0 chrX 124275318 124275381 -42374915 + (TC)n Simple_repeat Simple_repeat 2 64 0 3 1533 2608 251 21 4 chrX 124275413 124276146 -42374150 - Lx2B LINE L1 -11 6986 6217 3 1533 1363 216 0 0 chrX 124276141 124276460 -42373836 - L1_Mur1 LINE L1 -5797 1185 867 3 1533 3160 58 2 5 chrX 124282302 124282699 -42367597 - MTA_Mm LTR MaLR 0 396 1 3 1533 7623 73 35 14 chrX 124282699 124283391 -42366905 - MTA_Mm-int LTR MaLR 0 1098 387 3 1533 2902 39 22 0 chrX 124283391 124283750 -42366546 - L1Md_T LINE L1 0 6582 6216 3 1533 7623 73 35 14 chrX 124283750 124284132 -42366164 - MTA_Mm-int LTR MaLR -712 386 1 3 1533 3368 30 2 5 chrX 124284132 124284529 -42365767 - MTA_Mm LTR MaLR 0 396 1 3 1533 1191 254 64 40 chrX 124285047 124285502 -42364794 - ORR1A3-int LTR MaLR -926 1037 572 3 1533 1245 225 30 146 chrX 124285498 124285853 -42364443 - ORR1A3-int LTR MaLR -1326 637 332 3 1533 783 132 54 0 chrX 124285853 124285982 -42364314 + B1_Mus1 SINE Alu 1 136 -12 3 1533 335 23 0 22 chrX 124285983 124286028 -42364268 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 1533 1245 225 30 146 chrX 124286028 124286102 -42364194 - ORR1A3-int LTR MaLR -1632 331 257 3 1533 24786 122 21 2 chrX 124286102 124288016 -42362280 - L1_Mus2 LINE L1 0 6566 4628 3 1533 186 43 0 0 chrX 124288016 124288039 -42362257 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 1533 24786 138 34 5 chrX 124288039 124289424 -42360872 - L1_Mus2 LINE L1 -1256 4627 3145 3 1533 216 0 0 0 chrX 124289424 124289448 -42360848 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 1533 24786 139 34 6 chrX 124289448 124291393 -42358903 - L1_Mus2 LINE L1 -2739 3144 1188 3 1533 1378 244 39 31 chrX 124291440 124291796 -42358500 - RMER19C LTR ERVK -170 441 83 3 1533 831 206 65 24 chrX 124292016 124292170 -42358126 + RMER10B LTR ERVL 1 242 -156 3 1533 676 52 10 10 chrX 124292170 124292268 -42358028 + (TC)n Simple_repeat Simple_repeat 2 99 0 3 1533 831 194 11 45 chrX 124292268 124292424 -42357872 + RMER10B LTR ERVL 243 398 0 3 1533 561 292 89 7 chrX 124292527 124292724 -42357572 - MTE2b LTR MaLR 0 370 174 3 1533 749 73 0 9 chrX 124292995 124293105 -42357191 + (GAA)n Simple_repeat Simple_repeat 3 111 0 3 1533 555 164 22 22 chrX 124294145 124294282 -42356014 - Lx3_Mus LINE L1 -4 7005 6869 3 1533 10214 122 5 19 chrX 124294282 124295869 -42354427 - L1_Mur1 LINE L1 -592 5294 3726 3 1533 3255 42 7 5 chrX 124295869 124296275 -42354021 - L1Md_F3 LINE L1 -14 6570 6164 3 1533 10214 122 5 19 chrX 124296275 124296447 -42353849 - L1_Mur1 LINE L1 -2161 3725 3560 3 1533 3917 172 86 30 chrX 124296447 124297281 -42353015 + RLTR13D6 LTR ERVK 1 881 -21 3 1533 13384 116 29 4 chrX 124297288 124299936 -42350360 - L1_Mur1 LINE L1 -2321 3565 784 3 1533 967 249 58 85 chrX 124300577 124301046 -42349250 - L1_Mur1 LINE L1 -6519 465 10 3 1533 357 330 57 19 chrX 124301490 124301808 -42348488 - L1M3c LINE L1 -4877 1264 935 3 1533 381 22 0 0 chrX 124301918 124301964 -42348332 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1533 210 71 0 0 chrX 124303811 124303839 -42346457 + (T)n Simple_repeat Simple_repeat 1 28 0 3 1533 21 57 0 0 chrX 124304246 124304281 -42346015 + AT_rich Low_complexity Low_complexity 1 35 0 3 1533 441 0 0 0 chrX 124304587 124304636 -42345660 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1533 441 158 0 0 chrX 124304651 124304733 -42345563 + (TAG)n Simple_repeat Simple_repeat 2 83 0 3 1533 5414 116 41 5 chrX 124305113 124305962 -42344334 + Lx3_Mus LINE L1 6122 7001 -8 3 1533 576 61 10 20 chrX 124306381 124306481 -42343815 + (CAAAA)n Simple_repeat Simple_repeat 5 103 0 3 1533 183 220 0 0 chrX 124306685 124306735 -42343561 + (TAA)n Simple_repeat Simple_repeat 2 51 0 3 1533 378 0 0 0 chrX 124306736 124306778 -42343518 + (TTA)n Simple_repeat Simple_repeat 3 44 0 3 1533 449 367 85 0 chrX 124307785 124307973 -42342323 - B4A SINE B4 -86 206 3 3 1533 22 35 0 0 chrX 124308053 124308082 -42342214 + AT_rich Low_complexity Low_complexity 1 29 0 3 1533 512 313 60 0 chrX 124308385 124308551 -42341745 + B3A SINE B2 1 176 -22 3 1533 29 78 0 0 chrX 124308564 124308628 -42341668 + AT_rich Low_complexity Low_complexity 1 64 0 3 1533 227 230 15 38 chrX 124309204 124309367 -42340929 + (TATAA)n Simple_repeat Simple_repeat 1 159 0 3 1533 261 266 15 15 chrX 124309345 124309475 -42340821 + (TA)n Simple_repeat Simple_repeat 1 130 0 3 1533 754 130 29 0 chrX 124309510 124309648 -42340648 + (CATATA)n Simple_repeat Simple_repeat 3 144 0 3 1533 541 265 29 14 chrX 124309668 124309806 -42340490 - B1_Mur4 SINE Alu 0 150 11 3 1533 22 0 0 0 chrX 124309813 124309835 -42340461 + AT_rich Low_complexity Low_complexity 1 22 0 4 1533 25 31 0 0 chrX 124310217 124310249 -42340047 + AT_rich Low_complexity Low_complexity 1 32 0 4 1533 24 32 0 0 chrX 124310359 124310390 -42339906 + AT_rich Low_complexity Low_complexity 1 31 0 4 1533 558 43 0 0 chrX 124310425 124310494 -42339802 + (TA)n Simple_repeat Simple_repeat 2 70 0 4 1533 371 330 18 27 chrX 124310496 124310608 -42339688 - RSINE1 SINE B4 -51 114 4 4 1533 391 314 16 5 chrX 124310792 124310984 -42339312 + L1MA8 LINE L1 6019 6212 -79 4 1533 239 295 35 26 chrX 124311188 124311303 -42338993 - L1MA7 LINE L1 -126 6165 6050 4 1533 22 56 0 0 chrX 124312287 124312323 -42337973 + AT_rich Low_complexity Low_complexity 1 36 0 4 1533 562 200 0 0 chrX 124312520 124312615 -42337681 - RMER15 LTR ERVL -160 415 321 4 1533 315 257 16 99 chrX 124312650 124312771 -42337525 - RLTR23 LTR ERV1 -31 399 289 4 1533 382 291 17 60 chrX 124313183 124313300 -42336996 - RMER15 LTR ERVL -310 265 154 4 1533 11597 20 1 1 chrX 124313344 124314852 -42335444 - L1Md_T LINE L1 -595 5987 4480 4 1533 4914 33 31 0 chrX 124314864 124315447 -42334849 + L1Md_T LINE L1 5982 6582 0 4 1533 389 274 42 56 chrX 124315909 124315988 -42334308 - RMER15 LTR ERVL -403 172 94 4 1533 1774 134 97 3 chrX 124315988 124316287 -42334009 + ORR1A2 LTR MaLR 1 327 0 4 1533 389 274 42 56 chrX 124316287 124316350 -42333946 - RMER15 LTR ERVL -482 93 32 4 1533 620 334 81 11 chrX 124317360 124317708 -42332588 + Lx7 LINE L1 6990 7361 -335 4 1533 218 93 70 53 chrX 124317713 124317770 -42332526 + T-rich Low_complexity Low_complexity 2 59 0 4 1533 759 211 6 32 chrX 124317856 124318013 -42332283 - RMER10B LTR ERVL 0 398 246 4 1533 651 48 0 0 chrX 124318017 124318100 -42332196 + (GA)n Simple_repeat Simple_repeat 2 84 0 4 1533 241 167 0 0 chrX 124318122 124318158 -42332138 - ID4_ SINE ID -42 41 6 4 1533 719 328 48 16 chrX 124318237 124318488 -42331808 + ORR1E LTR MaLR 2 260 -99 4 1533 30 27 0 0 chrX 124318984 124319021 -42331275 + AT_rich Low_complexity Low_complexity 1 37 0 4 1533 414 0 0 0 chrX 124320751 124320797 -42329499 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1533 298 125 21 0 chrX 124321475 124321523 -42328773 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1533 612 116 0 0 chrX 124321523 124321618 -42328678 + (TTCC)n Simple_repeat Simple_repeat 3 97 0 4 1533 500 250 56 14 chrX 124321626 124321768 -42328528 - B1_Mur3 SINE Alu 0 149 2 4 1533 21 0 0 0 chrX 124322026 124322047 -42328249 + AT_rich Low_complexity Low_complexity 1 21 0 4 1533 450 0 0 0 chrX 124322199 124322249 -42328047 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 1533 6819 143 44 15 chrX 124322789 124323956 -42326340 - Lx3B LINE L1 -8 6965 5765 4 1533 2040 362 95 56 chrX 124323956 124324878 -42325418 + RMER17B LTR ERVK 1 958 0 4 1533 9543 129 8 18 chrX 124324880 124325835 -42324461 + MERVK26-int LTR ERVK 14 957 -5962 4 1533 279 0 0 0 chrX 124325835 124325866 -42324430 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1533 9543 129 8 18 chrX 124325866 124326474 -42323822 + MERVK26-int LTR ERVK 958 1561 -5358 4 1533 5665 123 26 2 chrX 124326466 124327359 -42322937 + MERVK26-int LTR ERVK 5405 6318 -601 4 1533 2226 82 28 19 chrX 124327359 124327681 -42322615 + IAPLTR2b LTR ERVK 1 325 -2 4 1533 567 143 83 64 chrX 124327682 124327839 -42322457 + IAPLTR4_I LTR ERVK 21 180 -1290 4 1533 4123 103 19 2 chrX 124327838 124328458 -42321838 + IAPLTR4_I LTR ERVK 546 1176 -294 4 1533 375 88 0 17 chrX 124328464 124328522 -42321774 + B1_Mus1 SINE Alu 1 57 -91 4 1533 7747 222 18 30 chrX 124328723 124330641 -42319655 + IAPLTR3-int LTR ERVK 4906 6801 -20 4 1533 2194 85 29 19 chrX 124330641 124330954 -42319342 + IAPLTR2b LTR ERVK 1 316 -11 4 1533 3587 57 0 19 chrX 124331058 124331543 -42318753 + IAPEz-int LTR ERVK 187 662 -5819 4 1533 424 38 0 0 chrX 124331543 124331596 -42318700 + IAPEz-int LTR ERVK 1359 1411 -5070 4 1533 1756 100 8 4 chrX 124331595 124331856 -42318440 + IAPEz-int LTR ERVK 2236 2497 -5183 4 1533 8054 78 3 8 chrX 124331855 124332978 -42317318 + IAPEz-int LTR ERVK 4656 5772 -709 4 1533 11589 58 12 11 chrX 124333078 124334585 -42315711 + IAPEz-int LTR ERVK 4974 6481 0 4 1533 2155 70 30 20 chrX 124334585 124334889 -42315407 + IAPLTR2b LTR ERVK 1 307 -20 4 1533 4030 138 7 3 chrX 124334907 124335494 -42314802 + IAPEz-int LTR ERVK 6314 6902 -17 4 1533 1879 128 25 0 chrX 124335494 124335821 -42314475 + L1_Mur1 LINE L1 4130 4464 -1422 4 1533 25 31 0 0 chrX 124335835 124335867 -42314429 + AT_rich Low_complexity Low_complexity 1 32 0 4 1533 372 320 90 57 chrX 124336857 124337365 -42312931 + IAPEz-int LTR ERVK 2596 3365 -3116 4 1533 250 257 77 29 chrX 124337559 124337663 -42312633 + IAPEz-int LTR ERVK 3711 3819 -3694 4 1533 313 321 66 65 chrX 124338738 124339332 -42310964 + MERVK26-int LTR ERVK 4549 5175 -3042 4 1533 2875 212 46 19 chrX 124340483 124341108 -42309188 + RLTR26 LTR ERVK 1 642 0 4 1533 272 268 96 16 chrX 124341318 124341476 -42308820 - L1MD LINE L1 -598 5761 5593 4 1533 1842 141 97 34 chrX 124341531 124341914 -42308382 - RLTR9E LTR ERVK 0 409 3 4 1533 953 252 202 45 chrX 124342042 124342532 -42307764 - RMER2 LTR ERV1 0 567 1 4 1533 860 268 10 19 chrX 124342548 124342757 -42307539 - B3 SINE B2 -8 208 2 4 1533 722 107 17 43 chrX 124342874 124342991 -42307305 - RLTR10D LTR ERVK 0 359 246 4 1533 1823 92 0 0 chrX 124343139 124343390 -42306906 - RLTR10D LTR ERVK -108 251 1 4 1533 43051 73 29 15 chrX 124343390 124349842 -42300454 - IAP-d-int LTR ERVK 0 6542 1 4 1533 2403 125 0 30 chrX 124349842 124350212 -42300084 - RLTR10D LTR ERVK 0 359 1 4 1533 390 308 97 27 chrX 124350561 124350931 -42299365 - L1MA5 LINE L1 -400 5900 5505 4 1533 453 36 0 0 chrX 124350935 124350990 -42299306 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 1533 583 285 68 37 chrX 124351064 124351359 -42298937 + L1MB1 LINE L1 4181 4484 -1656 4 1533 24 0 0 0 chrX 124351502 124351526 -42298770 + AT_rich Low_complexity Low_complexity 1 24 0 4 1533 462 336 20 51 chrX 124351546 124351838 -42298458 + L1MB1 LINE L1 5759 6041 -127 4 1533 249 83 0 0 chrX 124351906 124351942 -42298354 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 1533 299 403 24 72 chrX 124352311 124352477 -42297819 + B3A SINE B2 4 161 -37 4 1533 766 236 6 6 chrX 124352486 124352648 -42297648 + MTC LTR MaLR 3 164 -257 4 1533 1245 218 12 4 chrX 124353364 124353622 -42296674 + MTC LTR MaLR 162 421 0 4 1533 29 60 0 0 chrX 124353653 124353703 -42296593 + AT_rich Low_complexity Low_complexity 1 50 0 4 1533 21 57 0 0 chrX 124354837 124354872 -42295424 + AT_rich Low_complexity Low_complexity 1 35 0 4 1533 286 327 0 0 chrX 124355241 124355345 -42294951 - L1M2 LINE L1 -542 5758 5655 4 1533 235 268 103 19 chrX 124355533 124355689 -42294607 - L1M2 LINE L1 -778 5534 5366 4 1533 560 313 29 35 chrX 124355724 124356035 -42294261 - Lx9 LINE L1 -151 7493 7185 4 1533 280 288 250 0 chrX 124356033 124356165 -42294131 + Lx9 LINE L1 6465 6629 -1015 4 1533 631 319 41 16 chrX 124356235 124356550 -42293746 + Lx9 LINE L1 7148 7470 -174 4 1533 2667 329 48 57 chrX 124357198 124358627 -42291669 + RMER15-int LTR ERVL 210 1625 -3374 4 1533 1958 189 10 62 chrX 124359053 124359443 -42290853 + ORR1C1 LTR MaLR 3 372 -6 4 1533 338 386 67 22 chrX 124360053 124360366 -42289930 + RMER15-int LTR ERVL 2603 2929 -2070 4 1533 363 357 62 25 chrX 124360919 124361163 -42289133 + RMER15-int LTR ERVL 3505 3757 -1242 4 1533 1127 358 60 53 chrX 124361263 124362116 -42288180 + RMER15-int LTR ERVL 3821 4679 -320 4 1533 369 109 0 0 chrX 124362162 124362217 -42288079 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1533 8292 122 24 5 chrX 124362474 124363746 -42286550 - Lx3_Mus LINE L1 0 7009 5713 4 1533 3927 104 10 0 chrX 124363744 124364322 -42285974 + Lx3_Mus LINE L1 5163 5746 -140 4 1533 310 312 100 14 chrX 124365053 124365193 -42285103 + MIRc SINE MIR 57 208 -60 4 1533 27 49 0 0 chrX 124365307 124365348 -42284948 + AT_rich Low_complexity Low_complexity 1 41 0 4 1533 259 338 15 8 chrX 124365433 124365564 -42284732 + MIR SINE MIR 80 204 -58 4 1533 180 70 45 23 chrX 124366042 124366086 -42284210 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 4 1533 7390 75 3 36 chrX 124366585 124367676 -42282620 - L1_Mus1 LINE L1 0 6654 5519 4 1533 2633 148 2 7 chrX 124367680 124368128 -42282168 + L1_Mm LINE L1 4908 5353 -530 4 1533 7667 42 2 1 chrX 124368128 124369055 -42281241 + L1Md_F2 LINE L1 5593 6520 -62 4 1533 1132 192 4 8 chrX 124369269 124369511 -42280785 + L1Md_F2 LINE L1 6342 6582 0 4 1533 204 40 0 0 chrX 124369639 124369664 -42280632 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 4 1533 1623 54 0 19 chrX 124369664 124369873 -42280423 + L1_Mm LINE L1 5361 5565 -318 4 1533 545 200 81 0 chrX 124370382 124370542 -42279754 + RCHARR1 DNA MER1_type 727 899 -75 4 1533 581 327 33 11 chrX 124370544 124370816 -42279480 - MT2A LTR ERVL -2 531 254 4 1533 283 307 77 39 chrX 124370846 124371002 -42279294 - MT2A LTR ERVL -371 162 1 4 1533 311 284 54 27 chrX 124371289 124371401 -42278895 - PB1D9 SINE Alu -5 115 1 4 1533 312 346 37 18 chrX 124372115 124372224 -42278072 + PB1D7 SINE Alu 8 118 -2 4 1533 525 312 76 25 chrX 124372402 124372599 -42277697 + B3 SINE B2 5 211 -5 4 1533 21 36 0 0 chrX 124373283 124373311 -42276985 + AT_rich Low_complexity Low_complexity 1 28 0 4 1533 280 323 11 21 chrX 124373526 124373621 -42276675 - BC1_Mm scRNA scRNA -45 107 14 4 1533 272 265 94 98 chrX 124373672 124373899 -42276397 + L1MA5 LINE L1 5742 5969 -331 4 1533 356 371 56 46 chrX 124374064 124374208 -42276088 - Lx8 LINE L1 -1 7472 7336 4 1533 459 0 0 0 chrX 124374208 124374259 -42276037 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1533 356 371 56 46 chrX 124374259 124374509 -42275787 - Lx8 LINE L1 -138 7335 7075 4 1533 591 271 12 12 chrX 124374518 124374686 -42275610 + Lx8 LINE L1 6692 6859 -614 4 1533 281 176 14 0 chrX 124374952 124375026 -42275270 + CT-rich Low_complexity Low_complexity 2 76 0 4 1533 274 213 203 8 chrX 124375070 124375204 -42275092 + L1M3 LINE L1 4455 4612 -1528 4 1533 2048 353 66 62 chrX 124375221 124375540 -42274756 - Lx9 LINE L1 -463 7181 6869 4 1533 234 0 0 0 chrX 124375540 124375566 -42274730 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 4 1533 2048 353 66 62 chrX 124375566 124376784 -42273512 - Lx9 LINE L1 -776 6868 5639 4 1533 835 247 16 11 chrX 124376787 124376971 -42273325 - B3 SINE B2 -7 209 25 4 1533 504 290 33 22 chrX 124377464 124377739 -42272557 - L1M3 LINE L1 -1520 4620 4343 4 1533 459 285 111 53 chrX 124378716 124378905 -42271391 + B3 SINE B2 16 215 -1 4 1533 227 322 43 92 chrX 124379156 124379320 -42270976 - MLT1H-int LTR MaLR -738 671 516 4 1533 259 229 53 44 chrX 124379537 124379651 -42270645 - Lx9 LINE L1 -14 7630 7516 4 1533 189 74 0 0 chrX 124379655 124379682 -42270614 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1533 1576 348 34 29 chrX 124379734 124380522 -42269774 - Lx9 LINE L1 -272 7372 6581 4 1533 502 180 50 0 chrX 124380751 124380851 -42269445 - RMER19B LTR ERVK -797 105 1 4 1533 568 343 111 24 chrX 124381226 124381596 -42268700 + Lx8 LINE L1 7067 7468 -5 4 1533 891 220 11 6 chrX 124381790 124381968 -42268328 - MTC LTR MaLR -21 400 222 4 1533 607 352 26 0 chrX 124382035 124382308 -42267988 - B4A SINE B4 -12 280 1 4 1533 21 57 0 0 chrX 124383173 124383208 -42267088 + AT_rich Low_complexity Low_complexity 1 35 0 4 1533 4691 201 25 24 chrX 124383933 124384998 -42265298 + L1_Mur2 LINE L1 4225 5290 -587 4 1533 6842 124 12 40 chrX 124384996 124386100 -42264196 - L1_Mm LINE L1 -3487 2396 1324 4 1533 3470 82 0 11 chrX 124386100 124386571 -42263725 + L1Md_F2 LINE L1 6113 6578 -4 4 191 663 286 79 57 chrX 124386807 124387367 -42262929 - L1M2 LINE L1 -2460 3683 3112 4 1534 5648 36 0 0 chrX 124387470 124388143 -42262153 + L1Md_T LINE L1 5909 6581 -1 5 1534 1662 53 5 0 chrX 124388562 124388771 -42261525 - L1Md_F2 LINE L1 -565 6017 5808 5 1534 4128 70 8 40 chrX 124388771 124389366 -42260930 + L1Md_F2 LINE L1 6007 6582 0 5 1534 782 342 13 0 chrX 124389560 124389797 -42260499 + ORR1D2 LTR MaLR 1 240 -130 5 1534 300 27 0 0 chrX 124390011 124390048 -42260248 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1534 3118 205 9 17 chrX 124390358 124391003 -42259293 + RLTR33 LTR ERVK 1 640 -38 5 1534 376 325 102 66 chrX 124391032 124391124 -42259172 + RLTR11A2 LTR ERVK 7 118 -409 5 1534 504 0 0 0 chrX 124391124 124391180 -42259116 + (TC)n Simple_repeat Simple_repeat 2 57 0 5 1534 360 0 0 0 chrX 124391180 124391219 -42259077 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1534 376 325 102 66 chrX 124391219 124391428 -42258868 + RLTR11A2 LTR ERVK 119 319 -208 5 1534 847 267 130 60 chrX 124391964 124392311 -42257985 + ORR1D1 LTR MaLR 4 374 0 5 1534 1710 309 30 38 chrX 124392431 124393066 -42257230 - Lx8 LINE L1 -457 7016 6387 5 1534 648 329 27 14 chrX 124393066 124393285 -42257011 + MTE2b LTR MaLR 1 222 -157 5 1534 1148 296 79 25 chrX 124393286 124393640 -42256656 - MTD LTR MaLR -15 404 32 5 1534 3354 95 15 8 chrX 124393777 124394254 -42256042 - L1Md_F2 LINE L1 -1 6581 6102 5 1534 2704 60 6 6 chrX 124394254 124394597 -42255699 + L1Md_F2 LINE L1 5704 6048 -534 5 1534 291 28 0 0 chrX 124394597 124394633 -42255663 + (TTG)n Simple_repeat Simple_repeat 2 37 0 5 1534 315 300 63 82 chrX 124394695 124394902 -42255394 - Lx8 LINE L1 -1084 6389 6187 5 1534 698 314 118 91 chrX 124395472 124396099 -42254197 - MLT1F-int LTR MaLR -736 753 110 5 1534 328 367 7 7 chrX 124396693 124396833 -42253463 + B1_Mur2 SINE Alu 2 141 -8 5 1534 1015 127 6 6 chrX 124396834 124397008 -42253288 + (GAAA)n Simple_repeat Simple_repeat 1 174 0 5 1534 31353 92 3 17 chrX 124397043 124402271 -42248025 + L1Md_F2 LINE L1 446 5586 -297 5 1534 7566 77 0 0 chrX 124402271 124403265 -42247031 + L1Md_F2 LINE L1 5587 6580 -2 5 1534 364 341 47 12 chrX 124403864 124404036 -42246260 - MER70-int LTR ERVL -3188 1835 1658 5 1534 260 327 20 0 chrX 124404397 124404498 -42245798 - MER70-int LTR ERVL -3964 1059 957 5 1534 1076 287 28 35 chrX 124405382 124405700 -42244596 + MTE2a LTR MaLR 19 334 -45 5 1534 544 309 59 7 chrX 124405728 124405881 -42244415 - RSINE1 SINE B4 -3 162 2 5 1534 595 232 132 35 chrX 124406568 124406742 -42243554 + MTEb LTR MaLR 1 191 -188 5 1534 490 281 4 210 chrX 124406861 124407109 -42243187 + MTEb LTR MaLR 183 379 0 5 1534 22 35 0 0 chrX 124407207 124407236 -42243060 + AT_rich Low_complexity Low_complexity 1 29 0 5 1534 330 229 88 24 chrX 124407785 124407910 -42242386 - Lx9 LINE L1 -10 7634 7502 5 1534 277 206 0 16 chrX 124407922 124407986 -42242310 - Lx9 LINE L1 -195 7449 7387 5 1534 251 317 38 19 chrX 124408397 124408503 -42241793 + RLTR33 LTR ERVK 541 648 -30 5 1534 387 317 21 0 chrX 124408558 124408700 -42241596 - Lx9 LINE L1 -269 7375 7231 5 1534 237 65 0 0 chrX 124409001 124409032 -42241264 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 1534 343 245 45 9 chrX 124409098 124409209 -42241087 - Lx9 LINE L1 -214 7430 7316 5 1534 459 89 38 0 chrX 124409302 124409381 -42240915 + L1_Mus2 LINE L1 6484 6565 -1 5 1534 2360 138 20 5 chrX 124409404 124409805 -42240491 - L1_Mus3 LINE L1 -1 6637 6231 5 1534 24 0 0 0 chrX 124410180 124410204 -42240092 + AT_rich Low_complexity Low_complexity 1 24 0 5 1534 209 351 116 8 chrX 124410845 124410974 -42239322 - MIRm SINE MIR -115 161 19 5 1534 25 75 0 0 chrX 124411493 124411546 -42238750 + AT_rich Low_complexity Low_complexity 1 53 0 5 1534 189 0 0 0 chrX 124412647 124412668 -42237628 + (CAGAGA)n Simple_repeat Simple_repeat 4 24 0 5 1534 309 68 0 0 chrX 124412668 124412711 -42237585 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1534 2307 139 14 94 chrX 124413602 124414039 -42236257 - RLTR9D LTR ERVK -1 402 1 5 1534 404 122 27 13 chrX 124414039 124414114 -42236182 - ETnERV2-int LTR ERVK 0 7406 7331 5 1534 6400 209 45 38 chrX 124414334 124416742 -42233554 - ETnERV2-int LTR ERVK -1193 6213 2880 5 1534 234 0 0 0 chrX 124416742 124416768 -42233528 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 1534 6400 226 106 72 chrX 124416768 124418526 -42231770 - ETnERV2-int LTR ERVK -4527 2879 1076 5 1534 414 0 0 0 chrX 124418526 124418572 -42231724 + (TTTTA)n Simple_repeat Simple_repeat 4 49 0 5 1534 2828 233 68 98 chrX 124418572 124418897 -42231399 - ETnERV2-int LTR ERVK -2994 320 3 5 1534 2111 150 56 33 chrX 124418903 124419296 -42231000 - RLTR9D LTR ERVK -1 402 1 5 1534 44 75 0 0 chrX 124419690 124419783 -42230513 + AT_rich Low_complexity Low_complexity 1 93 0 5 1534 252 0 0 0 chrX 124420282 124420310 -42229986 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 5 1534 6356 202 73 8 chrX 124420312 124421680 -42228616 - Lx4B LINE L1 -9 7049 5587 5 1534 317 213 53 0 chrX 124421680 124421755 -42228541 + Lx4B LINE L1 5508 5586 -291 5 1534 4563 149 13 8 chrX 124422320 124423078 -42227218 + Lx2 LINE L1 5882 6643 -354 5 1534 1093 181 9 5 chrX 124423078 124423294 -42227002 + Lx2 LINE L1 6775 6991 -6 5 1534 283 206 15 0 chrX 124423813 124423881 -42226415 + L1M2 LINE L1 2127 2195 -3945 5 1534 433 326 7 29 chrX 124423899 124424035 -42226261 + ID_B1 SINE B4 77 209 -15 5 1534 456 67 0 0 chrX 124424035 124424095 -42226201 + (TAA)n Simple_repeat Simple_repeat 3 62 0 5 1534 835 304 69 12 chrX 124424121 124424759 -42225537 + L1M2 LINE L1 2226 2916 -3230 5 1534 927 27 0 0 chrX 124424861 124424971 -42225325 + (GAGAA)n Simple_repeat Simple_repeat 1 110 0 5 1534 289 368 47 0 chrX 124425230 124425336 -42224960 - PB1D10 SINE Alu -1 116 6 5 1534 382 301 134 15 chrX 124425359 124425770 -42224526 + L1M2 LINE L1 3208 3667 -2473 5 1534 3758 167 16 20 chrX 124425963 124426661 -42223635 + Lx2 LINE L1 6303 6997 0 5 1534 6563 206 30 52 chrX 124426684 124428436 -42221860 + L1_Mur2 LINE L1 1229 2942 -2935 5 1534 17636 201 55 17 chrX 124428443 124430654 -42219642 - L1_Mur2 LINE L1 -75 5802 3479 5 1534 597 110 0 0 chrX 124430654 124430763 -42219533 + (TATG)n Simple_repeat Simple_repeat 4 112 0 5 1534 17636 201 55 17 chrX 124430763 124432839 -42217457 - L1_Mur2 LINE L1 -2399 3478 1354 5 1534 343 0 43 0 chrX 124432845 124432892 -42217404 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 5 1534 2846 232 28 37 chrX 124432895 124433973 -42216323 - L1_Mur2 LINE L1 -3906 1974 907 5 1534 1045 242 30 111 chrX 124433975 124434379 -42215917 - RLTR31_Mm LTR ERVK 0 561 191 5 1534 293 333 19 62 chrX 124434448 124434608 -42215688 + L2a LINE L2 3183 3335 -91 5 1534 767 181 7 7 chrX 124434871 124435016 -42215280 - RLTR31_Mm LTR ERVK -439 145 1 5 1534 1534 199 18 59 chrX 124435581 124435918 -42214378 + ORR1A2 LTR MaLR 1 323 -4 5 1534 1387 216 168 23 chrX 124435918 124435981 -42214315 + ORR1A2-int LTR MaLR 442 510 -1453 5 1534 384 22 0 0 chrX 124435981 124436026 -42214270 + (TTAAA)n Simple_repeat Simple_repeat 5 49 0 5 1534 1387 216 168 23 chrX 124436026 124436487 -42213809 + ORR1A2-int LTR MaLR 511 1041 -922 5 1534 2188 50 22 0 chrX 124436506 124436783 -42213513 + L1Md_F2 LINE L1 6070 6352 -230 5 1534 613 93 59 0 chrX 124436798 124436916 -42213380 + L1Md_F2 LINE L1 6458 6582 0 5 1534 4730 144 30 4 chrX 124436917 124437689 -42212607 + ORR1A2-int LTR MaLR 1029 1820 -143 5 1534 23 33 0 0 chrX 124437792 124437822 -42212474 + AT_rich Low_complexity Low_complexity 1 30 0 5 1534 2582 233 44 104 chrX 124437886 124438735 -42211561 - RLTR40 LTR ERVK -19 798 1 5 1534 557 152 9 0 chrX 124438755 124438860 -42211436 + CT-rich Low_complexity Low_complexity 1 106 0 5 1534 783 243 34 1 chrX 124438877 124439131 -42211165 - L1_Mur3 LINE L1 -1691 4189 3927 5 1534 379 257 0 28 chrX 124439102 124439210 -42211086 - L1_Mur3 LINE L1 -2073 3807 3703 5 1534 351 266 45 27 chrX 124439331 124439443 -42210853 - L1M2 LINE L1 -2402 3741 3628 5 1534 377 245 18 42 chrX 124439483 124439649 -42210647 - L1_Mur3 LINE L1 -2405 3475 3314 5 1534 590 247 230 0 chrX 124439659 124439833 -42210463 + B3 SINE B2 3 216 0 5 1534 3671 82 2 4 chrX 124439862 124440354 -42209942 - L1_Mus1 LINE L1 0 6567 6077 5 1534 420 238 49 0 chrX 124440390 124440512 -42209784 - L1_Mur3 LINE L1 -2560 3320 3193 5 1534 1100 177 8 35 chrX 124440545 124440802 -42209494 - Lx2 LINE L1 -3 6970 6721 5 1534 784 152 0 141 chrX 124440802 124440986 -42209310 - L1_Mur1 LINE L1 -818 5068 4911 5 1534 608 178 0 0 chrX 124440987 124441094 -42209202 - U6 snRNA snRNA 0 107 1 5 1534 796 260 116 18 chrX 124441332 124441771 -42208525 + L1MA7 LINE L1 5392 5827 -464 5 1534 4539 144 10 3 chrX 124441768 124442520 -42207776 - Lx2 LINE L1 -519 6478 5754 5 1534 2859 158 2 15 chrX 124442520 124442995 -42207301 + Lx2 LINE L1 6522 6990 -7 5 1534 247 328 21 28 chrX 124443012 124443153 -42207143 + Lx9 LINE L1 5830 5969 -1675 5 1534 1090 64 0 14 chrX 124443213 124443355 -42206941 + B1_Mm SINE Alu 1 140 -7 5 1534 200 59 29 0 chrX 124443359 124443393 -42206903 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 1534 10866 111 13 9 chrX 124443482 124445657 -42204639 - L1VL2 LINE L1 -868 2747 566 5 1534 4749 146 71 6 chrX 124445684 124446516 -42203780 - RMER17B LTR ERVK -72 886 1 5 1534 2735 116 39 0 chrX 124446516 124446957 -42203339 - L1VL2 LINE L1 -5764 571 114 5 1534 3710 76 18 0 chrX 124446986 124447474 -42202822 - L1_Mus1 LINE L1 -1 6566 6070 5 1534 426 39 0 0 chrX 124447537 124447589 -42202707 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1534 288 0 0 0 chrX 124447589 124447621 -42202675 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 1534 1767 326 50 38 chrX 124447639 124447724 -42202572 + Lx9 LINE L1 6333 6415 -1229 5 1534 3355 182 47 23 chrX 124447724 124448099 -42202197 - RMER6D LTR ERVK -4 716 336 5 1534 728 83 9 0 chrX 124448099 124448208 -42202088 + (TC)n Simple_repeat Simple_repeat 1 110 0 5 1534 3355 182 47 23 chrX 124448208 124448531 -42201765 - RMER6D LTR ERVK -385 335 2 5 1534 1767 326 50 38 chrX 124448531 124448941 -42201355 + Lx9 LINE L1 6416 6852 -792 5 1534 4734 205 21 6 chrX 124448941 124449833 -42200463 - RMER13B LTR ERVK 0 908 3 5 1534 1767 326 50 38 chrX 124449833 124450346 -42199950 + Lx9 LINE L1 6853 7355 -289 5 1534 5787 228 36 8 chrX 124450342 124451830 -42198466 + Lx2B LINE L1 5462 6998 -2 5 1534 666 266 19 30 chrX 124451836 124452100 -42198196 + L1_Rod LINE L1 4433 4693 -1154 5 1534 720 282 83 77 chrX 124452190 124452692 -42197604 + L1_Rod LINE L1 4697 5176 -671 5 1534 427 305 13 34 chrX 124452691 124452852 -42197444 + Lx9 LINE L1 6350 6650 -994 5 1534 228 311 85 18 chrX 124454534 124454698 -42195598 + L1MC4a LINE L1 7505 7679 -203 5 1534 224 369 69 0 chrX 124454705 124454835 -42195461 - MIR SINE MIR -27 235 97 5 1534 30 27 0 0 chrX 124455429 124455466 -42194830 + AT_rich Low_complexity Low_complexity 1 37 0 5 1534 1982 168 3 3 chrX 124455469 124455810 -42194486 - Lx3B LINE L1 -5 6968 6628 5 1534 25 51 0 0 chrX 124455964 124456003 -42194293 + AT_rich Low_complexity Low_complexity 1 39 0 5 1534 532 374 88 22 chrX 124456110 124456646 -42193650 + L1MC4a LINE L1 5342 5912 -1970 5 1534 652 339 25 29 chrX 124456942 124457221 -42193075 + Lx8 LINE L1 6481 6758 -715 5 1534 2750 101 7 5 chrX 124457261 124457710 -42192586 - L1_Mur1 LINE L1 -2171 3715 3266 5 1534 9959 120 31 43 chrX 124457711 124460576 -42189720 + Lx3A LINE L1 4138 6957 -24 5 1534 570 346 44 32 chrX 124460652 124461085 -42189211 + Lx8 LINE L1 6843 7280 -193 5 1534 551 58 23 0 chrX 124461259 124461346 -42188950 - MusHAL1 LINE L1 -2286 426 338 5 1534 4841 38 3 0 chrX 124461347 124461921 -42188375 + L1Md_F2 LINE L1 5992 6567 -15 5 1534 14347 83 39 1 chrX 124461950 124464106 -42186190 - L1Md_F2 LINE L1 -582 5301 3063 5 1534 2048 43 4 0 chrX 124464108 124464366 -42185930 + L1Md_F2 LINE L1 5326 5584 -299 5 1534 7717 67 3 3 chrX 124464368 124465364 -42184932 + L1Md_F2 LINE L1 5587 6582 0 5 1534 1538 222 20 56 chrX 124465635 124466026 -42184270 + ORR1C1 LTR MaLR 2 378 0 5 1534 2005 231 64 46 chrX 124466225 124466773 -42183523 - RMER2 LTR ERV1 -9 558 1 5 1534 937 174 60 55 chrX 124467030 124467231 -42183065 + Lx3C LINE L1 6735 6936 -40 5 1534 234 179 0 0 chrX 124467415 124467471 -42182825 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 1534 374 299 171 44 chrX 124467473 124467928 -42182368 - Lx9 LINE L1 -127 7517 7005 5 1534 933 205 317 14 chrX 124467966 124468411 -42181885 - RMER6C LTR ERVK 0 690 111 6 1534 487 143 0 0 chrX 124468440 124468517 -42181779 + Lx5 LINE L1 6469 6545 -505 6 1534 868 123 0 37 chrX 124468512 124468673 -42181623 - L1_Mus2 LINE L1 -473 5410 5256 6 1534 6176 96 12 2 chrX 124468653 124469737 -42180559 + L1_Mus2 LINE L1 5402 6496 -70 6 1534 297 197 0 0 chrX 124470023 124470084 -42180212 + GA-rich Low_complexity Low_complexity 6 66 0 6 1534 1342 190 44 38 chrX 124470087 124470404 -42179892 + Lx4B LINE L1 6555 6873 -185 6 1534 2227 84 60 20 chrX 124470404 124470757 -42179539 - IAPLTR1_Mm LTR ERVK 0 367 1 6 1534 27654 18 1 2 chrX 124470761 124474034 -42176262 - IAPEz-int LTR ERVK -3 6478 3210 6 1534 7188 71 90 89 chrX 124474033 124475338 -42174958 - IAPEz-int LTR ERVK -5168 1313 8 6 1534 2201 87 60 20 chrX 124475338 124475691 -42174605 - IAPLTR1_Mm LTR ERVK 0 367 1 6 1534 513 225 45 136 chrX 124475691 124475912 -42174384 + Lx5 LINE L1 6845 7045 -5 6 1534 328 250 0 0 chrX 124475957 124476041 -42174255 - Lx9 LINE L1 -675 6969 6886 6 1534 352 308 152 42 chrX 124476043 124476378 -42173918 - L1M4c LINE L1 -4738 1646 1275 6 1534 23 0 0 0 chrX 124477675 124477698 -42172598 + AT_rich Low_complexity Low_complexity 1 23 0 6 1534 341 316 161 36 chrX 124477937 124478367 -42171929 - L1M4c LINE L1 -3107 3272 2790 6 1534 22 56 0 0 chrX 124479037 124479073 -42171223 + AT_rich Low_complexity Low_complexity 1 36 0 6 1534 372 344 76 22 chrX 124479095 124479318 -42170978 - L1M4c LINE L1 -4837 1547 1313 6 1534 441 210 142 8 chrX 124479335 124479455 -42170841 - ORR1C2 LTR MaLR -1 377 242 6 1534 283 371 0 19 chrX 124479598 124479705 -42170591 + ORR1B2 LTR MaLR 35 139 -228 6 1534 264 59 0 0 chrX 124479741 124479775 -42170521 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1534 180 176 0 0 chrX 124479777 124479811 -42170485 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1534 729 202 0 109 chrX 124479840 124480023 -42170273 - ORR1C2 LTR MaLR -218 166 4 6 1534 523 249 55 28 chrX 124480436 124480618 -42169678 + L1M2 LINE L1 3123 3309 -2834 6 1534 3124 219 11 32 chrX 124480618 124481035 -42169261 - L1_Mur3 LINE L1 -1994 3886 3475 6 1534 3293 112 253 98 chrX 124481035 124481434 -42168862 - RMER17A2 LTR ERVK -3 903 482 6 1534 563 40 14 0 chrX 124481434 124481508 -42168788 + (GA)n Simple_repeat Simple_repeat 2 76 0 6 1534 3293 112 253 98 chrX 124481508 124481890 -42168406 - RMER17A2 LTR ERVK -425 481 3 6 1534 3124 219 11 32 chrX 124481890 124482377 -42167919 - L1_Mur3 LINE L1 -2406 3474 3001 6 1534 4164 234 37 40 chrX 124482388 124483670 -42166626 + Lx5 LINE L1 4464 5741 -136 6 1534 473 183 10 0 chrX 124483670 124483774 -42166522 + (CATA)n Simple_repeat Simple_repeat 2 106 0 6 1534 276 111 0 0 chrX 124483773 124483818 -42166478 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 1534 1240 311 23 27 chrX 124483818 124484420 -42165876 + Lx6 LINE L1 6429 7418 -42 6 1534 404 279 7 0 chrX 124484394 124484530 -42165766 + Lx5 LINE L1 5871 6007 -1043 6 1534 894 306 50 20 chrX 124484989 124485561 -42164735 + Lx7 LINE L1 6750 7335 -138 6 1534 29 60 0 0 chrX 124485656 124485706 -42164590 + AT_rich Low_complexity Low_complexity 1 50 0 6 1534 18710 103 13 9 chrX 124485749 124489465 -42160831 + L1Md_F2 LINE L1 386 4114 -1769 6 1534 10058 91 5 4 chrX 124489567 124491096 -42159200 + L1_Mm LINE L1 3110 4639 -1244 6 1534 2922 21 3 0 chrX 124491105 124491441 -42158855 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 1534 644 20 260 0 chrX 124491441 124491541 -42158755 + IAPEz-int LTR ERVK 8 133 -6348 6 1534 3467 82 2 0 chrX 124491641 124492144 -42158152 + L1Md_F2 LINE L1 4136 4639 -1244 6 1534 2922 21 3 0 chrX 124492153 124492489 -42157807 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 1534 20437 39 40 14 chrX 124492489 124495163 -42155133 + IAPEz-int LTR ERVK 8 2751 -3730 6 1534 13663 8 1 2 chrX 124495155 124496751 -42153545 + IAPEz-int LTR ERVK 3244 4838 -1643 6 1534 9505 19 2 1 chrX 124497025 124498147 -42152149 + IAPEz-int LTR ERVK 5359 6481 0 6 1534 2910 15 0 43 chrX 124498147 124498499 -42151797 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 1534 8740 87 1 2 chrX 124498504 124499998 -42150298 + L1Md_F2 LINE L1 4631 6125 -457 6 1534 3061 106 4 9 chrX 124500000 124500457 -42149839 + L1Md_F2 LINE L1 6128 6582 0 1 1534 31 26 0 0 chrX 124500622 124500660 -42149636 + AT_rich Low_complexity Low_complexity 1 38 0 2 1534 1261 113 0 10 chrX 124501545 124501741 -42148555 + B2_Mm2 SINE B2 2 195 0 3 1534 5532 185 11 4 chrX 124501846 124502921 -42147375 + L1_Mur2 LINE L1 4560 5642 -235 4 1534 2487 151 157 8 chrX 124502921 124503423 -42146873 - MT2B2 LTR ERVL 0 584 8 5 1534 6142 172 19 17 chrX 124503423 124504549 -42145747 + Lx2 LINE L1 5869 6996 -1 6 1534 26 64 0 0 chrX 124504595 124504642 -42145654 + AT_rich Low_complexity Low_complexity 1 47 0 7 1534 822 170 0 0 chrX 124505034 124505205 -42145091 + (TA)n Simple_repeat Simple_repeat 2 172 0 8 1534 3626 144 30 12 chrX 124505835 124506431 -42143865 + Lx LINE L1 5930 6536 -118 9 1534 328 148 10 1 chrX 124506573 124506642 -42143654 + L1_Mur1 LINE L1 5480 5583 -717 1 1534 363 366 133 40 chrX 124510235 124510634 -42139662 - HAL1 LINE L1 -2036 471 36 1 1534 22 70 0 0 chrX 124510678 124510721 -42139575 + AT_rich Low_complexity Low_complexity 1 43 0 1 1534 26 30 0 0 chrX 124511087 124511120 -42139176 + AT_rich Low_complexity Low_complexity 1 33 0 1 1534 28 29 0 0 chrX 124511217 124511252 -42139044 + AT_rich Low_complexity Low_complexity 1 35 0 1 1534 3542 146 28 5 chrX 124511296 124511875 -42138421 + Lx LINE L1 6063 6654 0 1 1534 1964 281 67 9 chrX 124512068 124512629 -42137667 + RMER1C Other Other 252 1207 -135 1 1534 1031 236 24 20 chrX 124512636 124512882 -42137414 - Lx4B LINE L1 -4 7054 6808 1 1534 1815 202 81 3 chrX 124512876 124513248 -42137048 - Lx4B LINE L1 -456 6602 6202 1 1534 457 149 0 0 chrX 124513348 124513422 -42136874 - Lx5 LINE L1 -1091 5959 5886 1 1534 2224 220 76 4 chrX 124513514 124514002 -42136294 - Lx2 LINE L1 -7 6990 6468 1 1534 1441 196 94 24 chrX 124513998 124514328 -42135968 + Lx2B LINE L1 6105 6457 -543 2 1534 7369 159 40 3 chrX 124514378 124514761 -42135535 - Lx3C LINE L1 -2 6974 6579 2 1534 216 0 0 0 chrX 124514761 124514785 -42135511 + (TA)n Simple_repeat Simple_repeat 2 25 0 2 1534 7369 159 40 3 chrX 124514785 124515668 -42134628 - Lx3C LINE L1 -398 6578 5663 2 1534 524 345 119 14 chrX 124515681 124515932 -42134364 - L1MC LINE L1 -3303 2843 2589 2 1534 428 51 0 17 chrX 124515932 124515992 -42134304 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 2 1534 524 345 119 14 chrX 124515992 124516226 -42134070 - L1MC LINE L1 -3558 2588 2308 2 1534 432 191 0 0 chrX 124516278 124516367 -42133929 + (TG)n Simple_repeat Simple_repeat 1 89 0 2 1534 527 338 47 40 chrX 124516432 124516706 -42133590 - B4 SINE B4 -16 276 1 2 1534 4250 132 109 4 chrX 124516935 124517716 -42132580 - RMER17D LTR ERVK -1 888 26 2 1534 1126 281 41 13 chrX 124517789 124518103 -42132193 + Lx6 LINE L1 7113 7435 -25 2 1534 201 154 0 0 chrX 124518103 124518142 -42132154 + A-rich Low_complexity Low_complexity 4 42 0 2 1535 235 187 79 13 chrX 124518598 124518674 -42131622 - L1MA7 LINE L1 -336 5955 5875 3 1535 403 325 8 0 chrX 124519162 124519279 -42131017 + Tigger5 DNA MER2_type 26 143 -2263 3 1535 6507 39 6 0 chrX 124520342 124521132 -42129164 - L1Md_T LINE L1 0 6582 5788 3 1535 243 0 0 0 chrX 124521217 124521244 -42129052 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1535 1153 64 0 0 chrX 124521257 124521397 -42128899 - B1_Mus2 SINE Alu -7 140 1 3 1535 314 129 16 0 chrX 124521985 124522047 -42128249 + (GAAAA)n Simple_repeat Simple_repeat 3 65 0 3 1535 312 296 25 0 chrX 124522081 124522243 -42128053 - Lx9 LINE L1 -78 7566 7401 3 1535 1319 273 92 106 chrX 124522361 124522692 -42127604 + MT-int LTR MaLR 174 513 -585 3 1535 198 0 0 0 chrX 124522692 124522714 -42127582 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 3 1535 1001 61 23 0 chrX 124522714 124522846 -42127450 - B1_Mm SINE Alu -12 135 1 3 1535 1319 273 92 106 chrX 124522846 124523233 -42127063 + MT-int LTR MaLR 514 895 -203 3 1535 243 0 0 0 chrX 124523233 124523260 -42127036 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 4 1535 1319 273 92 106 chrX 124523260 124523314 -42126982 + MT-int LTR MaLR 896 935 -163 3 1535 572 112 0 20 chrX 124524192 124524292 -42126004 - L1_Mus2 LINE L1 0 6566 6469 4 1535 956 296 30 29 chrX 124525497 124525943 -42124353 - MuLV-int LTR ERV1 -2381 5397 4846 4 1535 836 355 79 54 chrX 124526338 124528751 -42121545 - MuLV-int LTR ERV1 -3220 4558 1763 4 1535 646 314 64 28 chrX 124529088 124529448 -42120848 - MuLV-int LTR ERV1 -3617 1446 1074 4 1535 1623 129 7 33 chrX 124529997 124530270 -42120026 - LTRIS2 LTR ERV1 0 564 299 4 1535 747 33 0 0 chrX 124530315 124530405 -42119891 + (TA)n Simple_repeat Simple_repeat 2 91 0 4 1535 1452 122 54 0 chrX 124530500 124530721 -42119575 + RLTR13C2 LTR ERVK 1 233 -575 4 1535 2719 108 16 16 chrX 124530721 124531160 -42119136 - L1Md_F2 LINE L1 -4 6634 6166 4 1535 8453 25 3 1 chrX 124531160 124532434 -42117862 - L1Md_T LINE L1 0 6582 5306 4 1535 2065 51 0 0 chrX 124532425 124532679 -42117617 - L1Md_F2 LINE L1 -414 6168 5915 4 1535 4425 60 0 0 chrX 124532677 124533227 -42117069 + L1Md_F2 LINE L1 5331 5880 -3 4 1535 3649 107 47 14 chrX 124533227 124533803 -42116493 + RLTR13C2 LTR ERVK 188 782 -26 4 1535 326 346 65 0 chrX 124534002 124534109 -42116187 + B3 SINE B2 76 189 -27 4 1535 528 275 70 7 chrX 124534244 124534387 -42115909 + B3 SINE B2 59 210 -6 4 1535 474 49 0 0 chrX 124535674 124535735 -42114561 + (TTTTG)n Simple_repeat Simple_repeat 4 64 0 5 1535 646 110 22 0 chrX 124535736 124535827 -42114469 - B1_Mm SINE Alu -8 139 47 5 1535 29 0 0 0 chrX 124536271 124536300 -42113996 + AT_rich Low_complexity Low_complexity 1 29 0 5 1535 2370 244 94 12 chrX 124536402 124537156 -42113140 + L1_Mur3 LINE L1 2068 2883 -2997 5 1535 880 167 4 17 chrX 124537156 124537387 -42112909 + GA-rich Low_complexity Low_complexity 1 227 0 5 1535 2538 169 84 26 chrX 124537388 124538582 -42111714 + L1_Mur1 LINE L1 3 1598 -4288 5 1535 2171 86 0 3 chrX 124538581 124538872 -42111424 - L1_Mus3 LINE L1 -422 6216 5927 5 1535 22 56 0 0 chrX 124539414 124539450 -42110846 + AT_rich Low_complexity Low_complexity 1 36 0 5 1535 189 121 0 0 chrX 124540156 124540189 -42110107 + (TTAA)n Simple_repeat Simple_repeat 3 35 0 5 1535 660 279 74 26 chrX 124540246 124540491 -42109805 - Lx6 LINE L1 -94 7366 7153 5 1535 305 82 20 0 chrX 124540514 124540563 -42109733 + (TTG)n Simple_repeat Simple_repeat 2 51 0 6 1535 22 0 0 0 chrX 124540941 124540963 -42109333 + AT_rich Low_complexity Low_complexity 1 22 0 6 1535 458 197 0 8 chrX 124541089 124541217 -42109079 + (TA)n Simple_repeat Simple_repeat 2 128 0 6 1535 192 231 0 0 chrX 124541303 124541355 -42108941 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1535 2764 33 0 0 chrX 124541359 124541695 -42108601 - ORR1A0 LTR MaLR -8 338 3 6 1535 477 0 0 0 chrX 124541710 124541763 -42108533 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1535 25 0 0 0 chrX 124542317 124542342 -42107954 + AT_rich Low_complexity Low_complexity 1 25 0 6 1535 526 283 17 0 chrX 124542405 124542525 -42107771 - B1_Mur1 SINE Alu -6 143 22 6 1535 37 39 0 0 chrX 124542924 124542975 -42107321 + AT_rich Low_complexity Low_complexity 1 51 0 6 1535 1035 47 0 0 chrX 124543104 124543233 -42107063 + (GGGAA)n Simple_repeat Simple_repeat 3 131 0 6 1535 502 267 49 24 chrX 124543923 124544046 -42106250 - ETnERV2-int LTR ERVK -204 7202 7077 7 1535 724 300 36 89 chrX 124544046 124544405 -42105891 - MTE2a LTR MaLR -36 343 4 7 1535 861 276 50 121 chrX 124544832 124545236 -42105060 + MTE2a LTR MaLR 1 375 -4 7 1535 21 36 0 0 chrX 124545246 124545274 -42105022 + AT_rich Low_complexity Low_complexity 1 28 0 7 1535 1869 199 2 29 chrX 124545482 124545523 -42104773 - Lx5 LINE L1 -1026 6024 5992 7 1535 4119 152 0 5 chrX 124545523 124546195 -42104101 - Lx LINE L1 -3 6651 5983 7 1535 5032 77 1 7 chrX 124546192 124546869 -42103427 + L1Md_F2 LINE L1 5904 6576 -6 7 1535 2630 89 3 3 chrX 124546869 124547239 -42103057 - Lx LINE L1 -662 5992 5623 7 1535 315 0 0 0 chrX 124547718 124547753 -42102543 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1535 417 86 0 0 chrX 124547851 124547909 -42102387 + (TA)n Simple_repeat Simple_repeat 2 59 0 7 1535 2158 184 47 24 chrX 124548052 124548503 -42101793 + RMER6B LTR ERVK 1 461 0 7 1535 36 40 0 0 chrX 124548984 124549034 -42101262 + AT_rich Low_complexity Low_complexity 1 50 0 8 1535 349 203 181 44 chrX 124549929 124549997 -42100299 - Lx7 LINE L1 -1 7695 7622 8 1535 477 0 0 0 chrX 124549997 124550050 -42100246 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 1535 349 203 181 44 chrX 124550050 124550141 -42100155 - Lx7 LINE L1 -75 7621 7514 8 1535 2093 254 144 49 chrX 124550166 124551536 -42098760 - Lx5 LINE L1 -438 7022 5143 8 1535 3298 169 7 12 chrX 124552021 124552603 -42097693 - Lx3C LINE L1 -2 6974 6396 8 1535 1805 174 135 0 chrX 124552606 124552992 -42097304 + Lx3C LINE L1 5941 6378 -598 8 1535 1455 313 100 22 chrX 124553169 124553881 -42096415 - Lx8 LINE L1 0 7473 6707 8 1535 276 30 0 0 chrX 124554207 124554240 -42096056 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1535 648 36 0 0 chrX 124554241 124554324 -42095972 + (CAGAGA)n Simple_repeat Simple_repeat 2 84 0 8 1535 437 391 0 0 chrX 124555711 124555849 -42094447 + RSINE1 SINE B4 3 140 -25 8 1535 21 57 0 0 chrX 124556073 124556108 -42094188 + AT_rich Low_complexity Low_complexity 1 35 0 8 1535 30 45 0 0 chrX 124556113 124556157 -42094139 + AT_rich Low_complexity Low_complexity 1 44 0 9 1535 773 312 19 19 chrX 124556157 124556363 -42093933 + B3 SINE B2 1 206 -10 9 1535 3973 204 53 28 chrX 124556556 124557407 -42092889 - Lx4B LINE L1 0 7058 6187 9 1535 1128 303 50 104 chrX 124557394 124558393 -42091903 + L1M2 LINE L1 3495 4439 -1704 9 1535 1585 52 0 0 chrX 124558393 124558584 -42091712 + B2_Mm1t SINE B2 2 192 -1 9 1535 1509 183 27 91 chrX 124558622 124558681 -42091615 - ORR1A4 LTR MaLR 0 329 271 9 1535 1631 52 5 0 chrX 124558681 124558892 -42091404 + L1Md_F2 LINE L1 6359 6570 -12 9 1535 1509 183 27 91 chrX 124558892 124559163 -42091133 - ORR1A4 LTR MaLR -59 270 20 9 1535 509 296 104 11 chrX 124559171 124559431 -42090865 + L1M2 LINE L1 4463 4746 -1397 9 1535 1801 236 35 17 chrX 124559438 124559843 -42090453 + MTC LTR MaLR 1 412 -9 9 1535 558 261 21 21 chrX 124559865 124560053 -42090243 - L1_Mur3 LINE L1 -3598 2282 2095 9 1535 27 62 0 0 chrX 124560128 124560176 -42090120 + AT_rich Low_complexity Low_complexity 1 48 0 9 1535 1243 256 163 23 chrX 124560201 124560344 -42089952 + RLTR11A LTR ERVK 1 172 -356 1 1535 180 0 0 0 chrX 124560344 124560364 -42089932 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1535 1243 256 163 23 chrX 124560364 124560655 -42089641 + RLTR11A LTR ERVK 173 495 -33 1 1535 1335 256 87 18 chrX 124560686 124561235 -42089061 - L1_Mur3 LINE L1 -3939 1941 1355 9 1535 1789 186 0 3 chrX 124561270 124561605 -42088691 - Lx LINE L1 -2 6652 6319 1 1535 2652 192 226 7 chrX 124561605 124562291 -42088005 + L1_Mm LINE L1 4335 5170 -713 1 1535 22 0 0 0 chrX 124562309 124562331 -42087965 + AT_rich Low_complexity Low_complexity 1 22 0 1 1535 450 349 29 23 chrX 124562637 124562832 -42087464 - B3 SINE B2 -5 190 1 1 1535 216 0 0 0 chrX 124563025 124563049 -42087247 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1 1535 1593 31 5 0 chrX 124563244 124563435 -42086861 + B2_Mm1t SINE B2 1 192 -1 1 1535 22 0 0 0 chrX 124563463 124563485 -42086811 + AT_rich Low_complexity Low_complexity 1 22 0 1 1535 306 0 0 0 chrX 124563587 124563621 -42086675 + (CAAAC)n Simple_repeat Simple_repeat 2 35 0 1 1535 1995 229 14 18 chrX 124564664 124565223 -42085073 + L1_Mur1 LINE L1 1536 2092 -3794 1 1535 3874 117 13 0 chrX 124565229 124565843 -42084453 + L1_Mur1 LINE L1 3602 4223 -1663 1 1535 332 115 0 0 chrX 124565853 124565914 -42084382 - Lx LINE L1 -3 6651 6591 1 1535 5021 57 1 11 chrX 124565942 124566593 -42083703 - L1Md_F2 LINE L1 0 6582 5938 1 1535 10865 121 12 70 chrX 124566593 124569242 -42081054 + Lx3A LINE L1 3876 6019 -962 1 1535 310 178 3 10 chrX 124569252 124569357 -42080939 - ORR1A2 LTR MaLR -23 371 203 1 1535 431 303 0 71 chrX 124569359 124569569 -42080727 + Lx9 LINE L1 6673 6867 -777 1 1535 306 125 0 0 chrX 124569851 124569899 -42080397 + (GGAA)n Simple_repeat Simple_repeat 2 49 0 1 1535 180 77 0 0 chrX 124570139 124570165 -42080131 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1 1535 22 0 0 0 chrX 124570518 124570540 -42079756 + AT_rich Low_complexity Low_complexity 1 22 0 1 1535 626 284 84 11 chrX 124570610 124570788 -42079508 + B3 SINE B2 3 193 -23 1 1535 7823 49 9 0 chrX 124570811 124572103 -42078193 - L1Md_F3 LINE L1 -16 6568 5266 1 1535 282 302 10 0 chrX 124572133 124572229 -42078067 - Charlie1a DNA MER1_type -1078 377 281 1 1535 297 269 94 19 chrX 124572286 124572392 -42077904 - Charlie1a DNA MER1_type -1290 165 52 1 1535 370 311 70 109 chrX 124572689 124572847 -42077449 - MLT1E2 LTR MaLR -302 325 172 1 1535 247 333 0 0 chrX 124572847 124572928 -42077368 + ID4_ SINE ID 1 81 -2 1 1535 370 311 70 109 chrX 124572928 124573025 -42077271 - MLT1E2 LTR MaLR -456 171 80 1 1535 26 30 0 0 chrX 124573256 124573289 -42077007 + AT_rich Low_complexity Low_complexity 1 33 0 1 1535 2938 220 47 3 chrX 124573291 124573907 -42076389 - Lx2B LINE L1 -23 6977 6335 1 1535 363 296 58 31 chrX 124574038 124574261 -42076035 + L1MB1 LINE L1 5743 5971 -218 1 1535 390 245 48 10 chrX 124574244 124574347 -42075949 + Lx8 LINE L1 7210 7316 -157 1 1535 804 234 107 22 chrX 124574347 124574612 -42075684 - ORR1D1 LTR MaLR -98 286 3 1 1535 737 196 7 20 chrX 124574653 124574804 -42075492 + B1_Mur4 SINE Alu 1 149 -1 1 1535 2360 35 0 7 chrX 124575042 124575333 -42074963 - L1Md_F3 LINE L1 -14 6570 6282 1 1535 670 318 51 23 chrX 124575716 124575932 -42074364 + B4A SINE B4 71 292 0 1 1535 477 0 0 0 chrX 124576354 124576407 -42073889 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1535 4604 75 3 2 chrX 124576942 124577558 -42072738 - L1_Mus1 LINE L1 -2 6565 5949 1 1535 2855 127 0 0 chrX 124577558 124577976 -42072320 + L1_Mus1 LINE L1 5455 5872 -11 1 1535 1072 58 0 7 chrX 124577993 124578132 -42072164 + B1_Mus2 SINE Alu 2 139 -8 1 1535 708 206 85 30 chrX 124578162 124578362 -42071934 + Lx9 LINE L1 6977 7187 -457 1 1535 384 22 0 0 chrX 124578429 124578474 -42071822 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 1535 718 208 88 102 chrX 124578474 124578758 -42071538 + RLTR21 LTR ERVK 816 1095 -477 1 1535 321 99 46 0 chrX 124578758 124578821 -42071475 + L1_Mus1 LINE L1 5862 5929 -637 1 1535 23 97 0 0 chrX 124578916 124578988 -42071308 + AT_rich Low_complexity Low_complexity 1 72 0 1 1535 379 265 0 10 chrX 124579544 124579643 -42070653 + Lx8 LINE L1 6426 6523 -950 1 1535 1305 189 209 3 chrX 124579654 124579961 -42070335 + ORR1C1 LTR MaLR 1 370 -8 1 1535 709 310 98 15 chrX 124579978 124580510 -42069786 + Lx8 LINE L1 6531 7122 -351 1 1535 906 362 125 37 chrX 124580713 124581233 -42069063 + L1M4b LINE L1 140 692 -6642 1 1535 1313 226 98 13 chrX 124581233 124581619 -42068677 - MTD LTR MaLR 0 419 1 1 1535 906 362 125 37 chrX 124581619 124582529 -42067767 + L1M4b LINE L1 693 1697 -5637 1 1535 2967 61 0 0 chrX 124582529 124582906 -42067390 - L1_Mus1 LINE L1 -1 6566 6190 1 1535 906 362 125 37 chrX 124582906 124582941 -42067355 + L1M4b LINE L1 1698 1735 -5599 1 1535 3728 84 0 40 chrX 124583373 124583929 -42066367 - L1_Mus2 LINE L1 0 6566 6033 1 1535 1580 68 13 18 chrX 124583929 124584153 -42066143 + L1_Mus2 LINE L1 5727 5949 -617 1 1535 2336 239 73 72 chrX 124584354 124584845 -42065451 + Lx7 LINE L1 6802 7318 -378 1 1535 207 0 0 0 chrX 124584845 124584868 -42065428 + (TGG)n Simple_repeat Simple_repeat 1 23 0 1 1535 2336 239 73 72 chrX 124584868 124584917 -42065379 + Lx7 LINE L1 7319 7359 -337 1 1535 861 103 0 0 chrX 124584917 124585043 -42065253 + (TTTC)n Simple_repeat Simple_repeat 2 127 0 1 1535 2336 239 73 72 chrX 124585043 124585113 -42065183 + Lx7 LINE L1 7360 7420 -276 1 1535 524 42 14 0 chrX 124585113 124585184 -42065112 + (TC)n Simple_repeat Simple_repeat 2 73 0 1 1535 225 0 0 0 chrX 124585184 124585208 -42065088 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1535 2336 239 73 72 chrX 124585208 124585329 -42064967 + Lx7 LINE L1 7421 7536 -160 1 1535 210 91 0 0 chrX 124585555 124585588 -42064708 + (CAA)n Simple_repeat Simple_repeat 2 34 0 1 1535 307 283 171 32 chrX 124586366 124586647 -42063649 - L1M3f LINE L1 -1349 4973 4654 1 1535 213 119 0 0 chrX 124586768 124586810 -42063486 + (A)n Simple_repeat Simple_repeat 1 42 0 1 1535 590 283 88 45 chrX 124586817 124587115 -42063181 - L1M3f LINE L1 -2575 3747 3446 1 1535 1224 133 10 5 chrX 124587115 124587319 -42062977 - L1_Mus3 LINE L1 -2 6636 6432 1 1535 442 283 88 45 chrX 124587319 124587461 -42062835 - L1M3f LINE L1 -2877 3445 3288 1 1535 356 352 87 12 chrX 124587536 124587697 -42062599 - B3A SINE B2 -5 193 21 1 1535 4286 110 39 7 chrX 124587697 124588727 -42061569 - Lx3_Mus LINE L1 -718 6291 5238 1 1535 1434 100 0 22 chrX 124588725 124588949 -42061347 - Lx3_Mus LINE L1 -1094 4792 4574 1 1535 203 55 0 53 chrX 124588952 124588990 -42061306 + (TTTTTG)n Simple_repeat Simple_repeat 6 41 0 1 1535 1106 82 0 0 chrX 124588990 124589137 -42061159 - B1_Mus2 SINE Alu 0 147 1 1 1535 4059 164 25 1 chrX 124589161 124589853 -42060443 + Lx3A LINE L1 6264 6971 -10 1 1535 545 42 14 0 chrX 124589853 124589925 -42060371 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 1 1535 981 281 110 19 chrX 124589998 124590859 -42059437 - L1M3f LINE L1 -3087 3238 2299 1 1535 307 261 23 8 chrX 124591174 124591305 -42058991 - Lx9 LINE L1 -2 7642 7510 1 1535 290 342 51 32 chrX 124591311 124591468 -42058828 - RSINE1 SINE B4 -4 161 2 1 1535 372 123 0 0 chrX 124591797 124591862 -42058434 - L1_Mus2 LINE L1 0 6566 6502 1 1535 317 125 0 0 chrX 124591862 124591910 -42058386 - L1_Mus2 LINE L1 -299 6337 6290 1 1535 220 282 271 0 chrX 124592354 124592439 -42057857 - PB1D10 SINE Alu 0 117 10 1 1535 234 322 34 0 chrX 124592389 124592448 -42057848 - ID_B1 SINE B4 -84 140 80 1 1535 241 298 51 44 chrX 124592449 124592723 -42057573 - L1M3f LINE L1 -4107 1221 946 1 1535 522 0 0 0 chrX 124592972 124593030 -42057266 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 1535 257 0 30 0 chrX 124593218 124593251 -42057045 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 1 1535 649 108 0 43 chrX 124593279 124593395 -42056901 - L1_Mus2 LINE L1 -1 6565 6455 1 1535 656 117 0 62 chrX 124593411 124593539 -42056757 - L1Md_F2 LINE L1 -1 6581 6462 1 1535 234 211 0 0 chrX 124593539 124593591 -42056705 + U2 snRNA snRNA 6 57 -131 1 1535 327 132 0 0 chrX 124596706 124596774 -42053522 + (T)n Simple_repeat Simple_repeat 1 68 0 1 1535 28 71 0 0 chrX 124597218 124597274 -42053022 + AT_rich Low_complexity Low_complexity 1 56 0 1 1535 21 0 0 0 chrX 124597540 124597561 -42052735 + AT_rich Low_complexity Low_complexity 1 21 0 1 1535 6893 148 16 14 chrX 124598331 124599554 -42050742 + L1_Mur2 LINE L1 3924 5149 -728 1 1535 371 308 11 0 chrX 124601189 124601280 -42049016 + PB1D10 SINE Alu 3 94 -23 1 1535 857 75 8 16 chrX 124601544 124601666 -42048630 - Lx2 LINE L1 -542 6455 6335 1 1535 33 43 0 0 chrX 124604335 124604382 -42045914 + AT_rich Low_complexity Low_complexity 1 47 0 1 1535 432 37 0 0 chrX 124604507 124604561 -42045735 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 1 1535 1035 76 21 7 chrX 124604561 124604696 -42045600 - B1_Mus1 SINE Alu -9 139 2 1 1535 1500 201 61 7 chrX 124604752 124605062 -42045234 - Lx4A LINE L1 -2 7056 6730 1 1535 22 0 0 0 chrX 124606496 124606518 -42043778 + AT_rich Low_complexity Low_complexity 1 22 0 1 1535 197 65 32 0 chrX 124607618 124607649 -42042647 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 1535 260 197 0 32 chrX 124607905 124607994 -42042302 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 1 1535 30 45 0 0 chrX 124608026 124608070 -42042226 + AT_rich Low_complexity Low_complexity 1 44 0 1 1535 26 0 0 0 chrX 124608839 124608865 -42041431 + AT_rich Low_complexity Low_complexity 1 26 0 1 1535 1591 68 0 0 chrX 124609750 124609956 -42040340 - L1_Mus3 LINE L1 -753 5885 5680 1 1535 826 230 16 85 chrX 124609957 124610202 -42040094 - ORR1A4 LTR MaLR -139 255 3 1 1535 281 263 29 48 chrX 124610506 124610610 -42039686 + RLTR14 LTR ERV1 278 379 -3 1 1535 927 88 0 55 chrX 124611239 124611384 -42038912 + B1_Mur4 SINE Alu 9 145 -5 1 1535 33 90 0 0 chrX 124611396 124611485 -42038811 + AT_rich Low_complexity Low_complexity 1 89 0 1 1535 3537 166 65 16 chrX 124611502 124612216 -42038080 - Lx2 LINE L1 -448 6549 5795 1 1535 325 230 18 50 chrX 124612234 124612355 -42037941 + MLT1F1 LTR MaLR 489 613 -14 1 1535 301 301 77 10 chrX 124612841 124612945 -42037351 + PB1D9 SINE Alu 3 113 -7 1 1535 443 126 11 0 chrX 124612945 124613040 -42037256 + (TAAA)n Simple_repeat Simple_repeat 1 96 0 1 1535 1136 62 0 0 chrX 124613092 124613238 -42037058 - B1_Mm SINE Alu 0 147 2 1 1535 213 146 0 0 chrX 124613851 124613874 -42036422 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1535 1111 42 21 0 chrX 124613874 124614017 -42036279 - B1_Mus1 SINE Alu 0 148 3 1 1535 213 146 0 0 chrX 124614017 124614034 -42036262 + (T)n Simple_repeat Simple_repeat 1 17 0 1 1535 370 253 45 6 chrX 124614792 124614971 -42035325 - Lx9 LINE L1 -1 7643 7458 1 1535 602 242 10 101 chrX 124614970 124615177 -42035119 - Lx9 LINE L1 -128 7516 7329 1 1535 1203 235 7 18 chrX 124615177 124615450 -42034846 + Lx9 LINE L1 7060 7329 -315 1 1535 768 42 0 0 chrX 124615747 124615843 -42034453 + (TG)n Simple_repeat Simple_repeat 1 96 0 2 1535 24 32 0 0 chrX 124616553 124616584 -42033712 + AT_rich Low_complexity Low_complexity 1 31 0 2 1535 304 264 41 23 chrX 124617976 124618147 -42032149 - L1ME2 LINE L1 -173 5991 5818 2 1535 242 312 68 34 chrX 124618298 124618474 -42031822 - L1ME2 LINE L1 -367 5757 5576 2 1535 531 330 10 5 chrX 124618913 124619120 -42031176 + B3 SINE B2 2 209 -7 2 1535 8013 54 1 0 chrX 124619337 124620682 -42029614 - L1Md_F2 LINE L1 -2 6580 5236 2 1535 7473 68 0 0 chrX 124620679 124621643 -42028653 + L1Md_F2 LINE L1 4295 5258 -625 2 1535 874 274 111 31 chrX 124621674 124622025 -42028271 + MTEb LTR MaLR 1 379 0 2 1535 206 136 23 0 chrX 124622499 124622543 -42027753 + (TTATA)n Simple_repeat Simple_repeat 3 47 0 2 1535 393 75 0 0 chrX 124622574 124622627 -42027669 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 1535 456 379 29 10 chrX 124622953 124623158 -42027138 + ORR1D2 LTR MaLR 1 209 -165 2 1535 3491 159 15 0 chrX 124623158 124623749 -42026547 + Lx2 LINE L1 6398 6997 0 2 1535 707 239 29 40 chrX 124623768 124623942 -42026354 + ORR1D2 LTR MaLR 195 366 -4 2 1535 2096 151 29 11 chrX 124624318 124624694 -42025602 - RLTR9A2 LTR ERVK 0 383 1 2 1535 3769 64 33 6 chrX 124624930 124625420 -42024876 - RLTR1C LTR ERV1 0 503 1 2 1535 5458 172 53 28 chrX 124625420 124627837 -42022459 - MMVL30-int LTR ERV1 -2386 5392 1501 2 1535 333 83 0 0 chrX 124628102 124628150 -42022146 - MMVL30-int LTR ERV1 -2190 1508 1461 2 1535 574 160 92 13 chrX 124628130 124628282 -42022014 - MMVL30-int LTR ERV1 -2115 1184 1021 2 1535 271 154 117 133 chrX 124628251 124628371 -42021925 - MMVL30-int LTR ERV1 -2222 1077 960 2 1535 4596 133 11 43 chrX 124628400 124629218 -42021078 - MMVL30-int LTR ERV1 -2191 1507 716 2 1535 1590 203 97 84 chrX 124629630 124630156 -42020140 - MMVL30-int LTR ERV1 -7023 533 1 2 1535 3957 68 2 2 chrX 124630156 124630659 -42019637 - RLTR1C LTR ERV1 0 503 1 2 1535 635 193 31 156 chrX 124631223 124631511 -42018785 - Lx9 LINE L1 -5 7639 7388 2 1535 999 233 8 37 chrX 124631517 124631762 -42018534 + Lx9 LINE L1 6745 6982 -662 2 1535 204 164 66 0 chrX 124631902 124631963 -42018333 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 1535 1348 194 16 0 chrX 124633295 124633553 -42016743 - RLTR11A2 LTR ERVK 0 527 266 2 1535 2182 150 6 3 chrX 124633570 124633930 -42016366 - Lx2 LINE L1 -3 6994 6634 2 1535 4986 115 22 0 chrX 124633932 124634690 -42015606 + L1_Mus3 LINE L1 5859 6633 -5 2 1535 27 0 0 0 chrX 124635682 124635709 -42014587 + AT_rich Low_complexity Low_complexity 1 27 0 2 1535 23 78 0 0 chrX 124635736 124635787 -42014509 + AT_rich Low_complexity Low_complexity 1 51 0 2 1535 852 280 16 0 chrX 124635805 124635994 -42014302 - B3 SINE B2 -22 194 3 2 1535 22 0 0 0 chrX 124635999 124636021 -42014275 + AT_rich Low_complexity Low_complexity 1 22 0 2 1535 702 346 62 58 chrX 124636126 124636217 -42014079 - Lx8 LINE L1 -11 7633 7546 2 1535 396 0 0 0 chrX 124636217 124636261 -42014035 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1535 1430 346 62 58 chrX 124636261 124637110 -42013186 - Lx8 LINE L1 -99 7545 6563 2 1535 625 291 33 28 chrX 124637115 124637327 -42012969 + B3 SINE B2 1 213 -3 2 1535 9839 92 8 15 chrX 124637737 124639848 -42010448 - L1Md_F2 LINE L1 -12 6570 4461 2 1535 5087 84 0 3 chrX 124639848 124640549 -42009747 + L1Md_F2 LINE L1 3729 4427 -1456 2 1535 407 282 27 8 chrX 124640922 124641090 -42009206 - L1_Mur3 LINE L1 -652 5645 5474 2 1535 28 61 0 0 chrX 124641090 124641139 -42009157 + AT_rich Low_complexity Low_complexity 1 49 0 2 1535 27 0 0 0 chrX 124641305 124641332 -42008964 + AT_rich Low_complexity Low_complexity 1 27 0 2 1535 21 36 0 0 chrX 124642078 124642106 -42008190 + AT_rich Low_complexity Low_complexity 1 28 0 2 1535 23 33 0 0 chrX 124642842 124642872 -42007424 + AT_rich Low_complexity Low_complexity 1 30 0 2 1535 1535 214 80 3 chrX 124642918 124643283 -42007013 + ORR1B1 LTR MaLR 1 393 -1 2 1535 22 56 0 0 chrX 124643943 124643979 -42006317 + AT_rich Low_complexity Low_complexity 1 36 0 2 1535 22 35 0 0 chrX 124644359 124644388 -42005908 + AT_rich Low_complexity Low_complexity 1 29 0 2 1535 1109 236 16 78 chrX 124644489 124644810 -42005486 + RLTR21 LTR ERVK 364 664 -908 2 1535 23 54 0 0 chrX 124644911 124644948 -42005348 + AT_rich Low_complexity Low_complexity 1 37 0 2 1535 242 316 29 0 chrX 124644948 124645087 -42005209 + L1_Rod LINE L1 1560 1702 -4145 2 1535 3411 100 8 36 chrX 124645101 124645630 -42004666 - L1Md_F2 LINE L1 -2 6580 6067 2 1535 11033 78 1 1 chrX 124645630 124647292 -42003004 + L1Md_F2 LINE L1 4383 6042 -540 2 1535 225 318 87 29 chrX 124647287 124647494 -42002802 + L1_Rod LINE L1 1697 1915 -3932 2 1535 2019 59 4 0 chrX 124647519 124647774 -42002522 + IAPEY3-int LTR ERVK 7409 7664 -16 2 1535 34 0 0 0 chrX 124647778 124647812 -42002484 + AT_rich Low_complexity Low_complexity 1 34 0 2 1535 2904 48 3 0 chrX 124647820 124648173 -42002123 + IAPEY2_LTR LTR ERVK 1 354 -3 2 1535 344 325 46 25 chrX 124648193 124648552 -42001744 + L1_Rod LINE L1 1925 2296 -3850 2 1535 236 120 240 0 chrX 124648535 124648585 -42001711 + L1_Rod LINE L1 5786 5847 0 2 1535 559 118 0 35 chrX 124648848 124648962 -42001334 + (TG)n Simple_repeat Simple_repeat 1 110 0 2 1535 617 296 103 26 chrX 124648968 124649200 -42001096 + Lx8 LINE L1 6200 6449 -1024 2 1535 286 237 11 47 chrX 124649204 124649294 -42001002 + MT2B LTR ERVL 51 133 -468 2 191 899 256 29 45 chrX 124649301 124649546 -42000750 + MT2B LTR ERVL 289 529 -72 2 1536 1440 330 43 5 chrX 124649645 124650229 -42000067 + Lx8 LINE L1 6710 7315 -158 2 1536 510 46 0 0 chrX 124650243 124650308 -41999988 + (TG)n Simple_repeat Simple_repeat 2 66 0 2 1536 200 214 0 18 chrX 124650727 124650762 -41999534 + A-rich Low_complexity Low_complexity 1 34 0 2 1536 1006 102 0 7 chrX 124650762 124650910 -41999386 + B1_Mus1 SINE Alu 1 147 -1 2 1536 200 214 0 18 chrX 124650910 124650931 -41999365 + A-rich Low_complexity Low_complexity 35 55 0 2 1536 899 63 0 8 chrX 124651109 124651237 -41999059 + (GA)n Simple_repeat Simple_repeat 2 128 0 2 1536 3236 257 27 12 chrX 124651255 124652031 -41998265 + Lx7 LINE L1 6426 7213 -483 2 1536 1227 97 0 0 chrX 124652032 124652208 -41998088 + (TTTC)n Simple_repeat Simple_repeat 4 179 0 2 1536 210 118 0 0 chrX 124652223 124652257 -41998039 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1536 405 186 22 65 chrX 124652501 124652685 -41997611 + (TTATA)n Simple_repeat Simple_repeat 5 180 0 2 1536 384 196 53 6 chrX 124652689 124653049 -41997247 + (TA)n Simple_repeat Simple_repeat 1 376 0 2 1536 372 184 58 18 chrX 124653108 124653339 -41996957 + (TA)n Simple_repeat Simple_repeat 1 240 0 2 1536 243 179 73 8 chrX 124653353 124653477 -41996819 + (TA)n Simple_repeat Simple_repeat 2 133 0 2 1536 212 264 114 11 chrX 124653587 124653675 -41996621 + B1F1 SINE Alu 46 142 -7 2 1536 1133 122 0 0 chrX 124653685 124653849 -41996447 + B2_Mm2 SINE B2 2 165 -30 2 1536 46 89 0 0 chrX 124653991 124654114 -41996182 + AT_rich Low_complexity Low_complexity 1 123 0 2 1536 433 330 13 20 chrX 124654116 124654287 -41996009 - B3A SINE B2 0 216 49 2 1536 639 249 44 71 chrX 124654287 124654512 -41995784 - RMER6D LTR ERVK 0 720 502 2 1536 5877 169 95 25 chrX 124654512 124655864 -41994432 - RMER6-int LTR ERVK -1499 1678 232 2 1536 203 278 10 82 chrX 124655900 124655998 -41994298 + L3 LINE CR1 3476 3566 -923 2 1536 289 164 55 0 chrX 124655998 124656053 -41994243 - RMER6-int LTR ERVK -3113 64 7 2 1536 898 244 5 0 chrX 124656082 124656275 -41994021 - RMER6D LTR ERVK -25 695 502 2 1536 594 200 24 16 chrX 124656265 124656392 -41993904 - ORR1A2 LTR MaLR -167 160 33 2 1536 379 376 39 10 chrX 124656420 124656627 -41993669 + MLT-int LTR MaLR 380 592 -1143 2 1536 21 0 0 0 chrX 124656639 124656660 -41993636 + AT_rich Low_complexity Low_complexity 1 21 0 2 1536 240 224 0 0 chrX 124656677 124656744 -41993552 + (CATA)n Simple_repeat Simple_repeat 2 68 0 2 1536 456 19 0 0 chrX 124658238 124658291 -41992005 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 1536 363 23 0 0 chrX 124658815 124658859 -41991437 + (TA)n Simple_repeat Simple_repeat 1 44 0 2 1536 24 32 0 0 chrX 124659915 124659946 -41990350 + AT_rich Low_complexity Low_complexity 1 31 0 2 1536 443 277 142 36 chrX 124660623 124660904 -41989392 + L1M1 LINE L1 5263 5573 -727 2 1536 1757 58 0 0 chrX 124660954 124661177 -41989119 - L1_Mus3 LINE L1 -178 6460 6238 2 1536 889 116 14 0 chrX 124661179 124661325 -41988971 + L1_Mus3 LINE L1 6474 6621 -17 2 1536 360 0 0 0 chrX 124661325 124661365 -41988931 + (TAA)n Simple_repeat Simple_repeat 3 42 0 2 1536 3193 199 135 13 chrX 124661549 124662398 -41987898 + Lx3_Mus LINE L1 207 1344 -5640 2 1536 1897 51 0 4 chrX 124662396 124662631 -41987665 - L1Md_F2 LINE L1 -25 6557 6324 2 1536 23171 122 24 30 chrX 124662663 124664219 -41986077 + Lx3_Mus LINE L1 1342 2873 -3013 2 1536 960 114 0 0 chrX 124664219 124664368 -41985928 + (GAAA)n Simple_repeat Simple_repeat 3 151 0 2 1536 23171 122 24 30 chrX 124664368 124664864 -41985432 + Lx3_Mus LINE L1 2874 3380 -2506 2 1536 5161 102 15 1 chrX 124664864 124665608 -41984688 - L1_Mus3 LINE L1 0 6638 5885 2 1536 23171 122 24 30 chrX 124665608 124667180 -41983116 + Lx3_Mus LINE L1 3381 4933 -953 2 1536 2680 83 59 3 chrX 124667180 124667555 -41982741 + MTA_Mm LTR MaLR 1 396 0 2 1536 12265 128 21 53 chrX 124667555 124669803 -41980493 + Lx3_Mus LINE L1 4935 7004 -5 2 1536 1131 174 27 0 chrX 124670099 124670323 -41979973 - L1_Mur2 LINE L1 -859 5018 4789 2 1536 432 293 79 33 chrX 124670410 124670656 -41979640 - L1M4 LINE L1 -840 5306 5045 2 1536 21 57 0 0 chrX 124672230 124672265 -41978031 + AT_rich Low_complexity Low_complexity 1 35 0 2 1536 222 37 0 0 chrX 124672480 124672507 -41977789 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 1536 930 302 72 32 chrX 124672611 124673185 -41977111 - Lx8 LINE L1 -1645 5828 5229 2 1536 21 0 0 0 chrX 124673287 124673308 -41976988 + AT_rich Low_complexity Low_complexity 1 21 0 2 1536 186 128 0 0 chrX 124673939 124673978 -41976318 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1536 309 66 16 32 chrX 124674635 124674698 -41975598 + (TTTG)n Simple_repeat Simple_repeat 2 63 0 2 1536 990 207 0 6 chrX 124674718 124674898 -41975398 + L1VL1 LINE L1 166 344 -6078 2 1536 6834 95 20 1 chrX 124674901 124675692 -41974604 + L1Md_F2 LINE L1 1270 2070 -3813 2 1536 315 0 0 0 chrX 124675692 124675727 -41974569 + (TAA)n Simple_repeat Simple_repeat 1 35 0 2 1536 6834 93 18 1 chrX 124675727 124675978 -41974318 + L1Md_F2 LINE L1 2071 2335 -3548 2 1536 33422 77 4 0 chrX 124675976 124681123 -41969173 + L1Md_F3 LINE L1 416 5586 -297 2 1536 7907 42 8 14 chrX 124681123 124682126 -41968170 + L1Md_F3 LINE L1 5587 6583 -1 2 1536 492 18 0 0 chrX 124682157 124682214 -41968082 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1536 450 0 0 0 chrX 124682214 124682263 -41968033 + (TA)n Simple_repeat Simple_repeat 2 51 0 2 1536 405 0 0 0 chrX 124682748 124682793 -41967503 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1536 596 14 14 0 chrX 124683053 124683126 -41967170 + (TC)n Simple_repeat Simple_repeat 1 74 0 2 1536 441 54 0 0 chrX 124683126 124683181 -41967115 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 1536 22431 97 6 14 chrX 124683430 124686729 -41963567 + L1Md_F2 LINE L1 2312 5585 -298 2 1536 7228 74 8 10 chrX 124686730 124687712 -41962584 + L1Md_F2 LINE L1 5587 6566 -16 2 1536 322 69 17 17 chrX 124687732 124687791 -41962505 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 2 1536 682 320 14 18 chrX 124688511 124688734 -41961562 + Lx5 LINE L1 6522 6743 -307 2 1536 247 358 31 31 chrX 124689276 124689403 -41960893 - B4A SINE B4 0 292 166 2 1536 180 111 0 0 chrX 124689428 124689455 -41960841 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2 1536 256 322 0 0 chrX 124689462 124689521 -41960775 - B4A SINE B4 -207 85 27 2 1536 1166 305 94 24 chrX 124689589 124690214 -41960082 - L1MB3 LINE L1 -18 6165 5497 2 1536 21 0 0 0 chrX 124690667 124690688 -41959608 + AT_rich Low_complexity Low_complexity 1 21 0 2 1536 350 282 61 30 chrX 124690799 124690958 -41959338 + ORR1C2 LTR MaLR 1 194 -190 2 1536 206 156 22 0 chrX 124690961 124691006 -41959290 + CT-rich Low_complexity Low_complexity 1 46 0 2 1536 408 289 0 0 chrX 124691006 124691103 -41959193 + ORR1C2 LTR MaLR 174 270 -114 2 1536 1038 189 71 18 chrX 124691199 124691425 -41958871 - Lx LINE L1 0 6654 6417 3 1536 3048 147 62 12 chrX 124691411 124691928 -41958368 - Lx2 LINE L1 -349 6648 6106 3 1536 3077 191 11 10 chrX 124691931 124692499 -41957797 + Lx2 LINE L1 5274 5847 -36 3 1536 2830 38 6 3 chrX 124692499 124692844 -41957452 - ORR1A0 LTR MaLR 0 346 1 3 1536 3077 141 62 12 chrX 124692844 124693066 -41957230 + Lx2 LINE L1 5848 6091 -906 3 1536 536 0 0 15 chrX 124693095 124693160 -41957136 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 1536 431 201 8 0 chrX 124693164 124693298 -41956998 + GA-rich Low_complexity Low_complexity 2 136 0 3 1536 15025 153 6 33 chrX 124693546 124697232 -41953064 - L1_Mus2 LINE L1 0 6566 2985 3 1536 450 0 0 0 chrX 124697294 124697344 -41952952 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1536 848 123 7 0 chrX 124697344 124697498 -41952798 + (GA)n Simple_repeat Simple_repeat 1 156 0 3 1536 387 250 16 122 chrX 124697615 124697655 -41952641 - ID_B1 SINE B4 -5 219 180 3 1536 990 120 6 11 chrX 124697655 124697832 -41952464 + (TTTC)n Simple_repeat Simple_repeat 2 177 0 3 1536 986 121 0 0 chrX 124697836 124697976 -41952320 - B1_Mus1 SINE Alu -8 140 1 3 1536 355 221 64 135 chrX 124697976 124698070 -41952226 - B1F SINE Alu -46 103 17 3 1536 387 233 554 84 chrX 124698070 124698092 -41952204 - ID_B1 SINE B4 -45 179 8 3 1536 1141 268 88 45 chrX 124698337 124698759 -41951537 - RMER13A LTR ERVK -400 460 21 3 1536 261 325 98 70 chrX 124698858 124698938 -41951358 + MLT2B5 LTR ERVL 76 170 -431 3 1536 1183 142 60 28 chrX 124698938 124699156 -41951140 - URR1B DNA MER1_type 0 225 1 3 1536 261 325 98 70 chrX 124699156 124699290 -41951006 + MLT2B5 LTR ERVL 171 296 -305 3 1536 29 0 0 0 chrX 124699514 124699543 -41950753 + AT_rich Low_complexity Low_complexity 1 29 0 3 1536 552 319 22 27 chrX 124699585 124699769 -41950527 + B3A SINE B2 1 183 -15 3 1536 3032 230 25 7 chrX 124702366 124703100 -41947196 + Lx5 LINE L1 6215 7050 0 3 1536 378 323 42 35 chrX 124703111 124703224 -41947072 + L1MC LINE L1 5487 5597 -747 3 1536 1095 69 0 0 chrX 124703224 124703369 -41946927 + (GAAAA)n Simple_repeat Simple_repeat 2 146 0 3 1536 378 299 97 58 chrX 124703369 124703585 -41946711 + L1MC LINE L1 5598 5828 -531 3 1536 1752 281 84 25 chrX 124703691 124704780 -41945516 + L1_Mur3 LINE L1 388 1547 -4333 3 1536 2142 211 19 8 chrX 124704816 124705351 -41944945 - L1_Mur2 LINE L1 -2452 3425 2885 3 1536 2177 233 11 23 chrX 124705363 124705886 -41944410 - RLTR12B LTR ERVK -11 517 1 3 1536 207 0 0 0 chrX 124705922 124705945 -41944351 + (TAA)n Simple_repeat Simple_repeat 1 23 0 3 1536 192 77 0 0 chrX 124706043 124706069 -41944227 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1536 549 49 61 0 chrX 124706588 124706670 -41943626 - MusHAL1 LINE L1 -626 2086 2000 3 1536 363 60 0 0 chrX 124706670 124706720 -41943576 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 1536 432 271 37 74 chrX 124706764 124707007 -41943289 + Lx7 LINE L1 7461 7694 -2 3 1536 989 130 85 0 chrX 124707028 124707205 -41943091 + B2_Mm2 SINE B2 2 193 -2 3 1536 1248 229 108 18 chrX 124707532 124707703 -41942593 + ORR1D1 LTR MaLR 1 174 -200 3 1536 1648 201 84 15 chrX 124707703 124708097 -41942199 - MTC LTR MaLR 0 421 1 3 1536 1248 229 108 18 chrX 124708097 124708268 -41942028 + ORR1D1 LTR MaLR 175 374 0 3 1536 423 38 0 0 chrX 124708962 124709015 -41941281 + (TCCC)n Simple_repeat Simple_repeat 4 56 0 3 1536 755 133 0 8 chrX 124709015 124709144 -41941152 + (TTTC)n Simple_repeat Simple_repeat 3 130 0 3 1536 748 201 8 0 chrX 124709149 124709283 -41941013 - B1_Mus1 SINE Alu -1 147 13 3 1536 292 357 39 77 chrX 124709150 124709305 -41940991 - B4 SINE B4 -69 223 75 3 1536 381 312 0 9 chrX 124709404 124709517 -41940779 - RMER5 LTR ERV1 -11 523 412 3 1536 279 0 0 0 chrX 124709544 124709575 -41940721 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 3 1536 25361 72 5 149 chrX 124709650 124715458 -41934838 - L1Md_F2 LINE L1 0 6582 1675 3 1536 550 319 54 29 chrX 124715459 124715737 -41934559 - RMER5 LTR ERV1 -230 304 20 3 1536 551 15 15 0 chrX 124716334 124716402 -41933894 + (GAAA)n Simple_repeat Simple_repeat 1 69 0 3 1536 375 62 0 0 chrX 124716402 124716450 -41933846 + (GAGAA)n Simple_repeat Simple_repeat 1 48 0 3 1536 944 144 6 0 chrX 124716450 124716623 -41933673 + GA-rich Low_complexity Low_complexity 4 177 0 3 1536 636 182 22 0 chrX 124717408 124717545 -41932751 - Lx2A1 LINE L1 -2 7006 6867 3 1536 394 193 132 49 chrX 124718130 124718254 -41932042 - RMER20B LTR ERVK -383 133 1 3 1536 2157 100 137 5 chrX 124718747 124719119 -41931177 - BGLII LTR ERVK 0 421 1 3 1536 353 266 91 42 chrX 124719388 124719553 -41930743 + RLTR42-int LTR ERVK 1105 1277 -4245 3 1536 1410 271 46 69 chrX 124719587 124720091 -41930205 + MTC-int LTR MaLR 736 1227 -31 3 1536 22 35 0 0 chrX 124720343 124720372 -41929924 + AT_rich Low_complexity Low_complexity 1 29 0 3 1536 857 191 11 5 chrX 124720374 124720564 -41929732 + RLTR42-int LTR ERVK 1942 2132 -3390 3 1536 23 0 0 0 chrX 124720661 124720684 -41929612 + AT_rich Low_complexity Low_complexity 1 23 0 3 1536 480 240 144 0 chrX 124720703 124720828 -41929468 - B1_Mur3 SINE Alu -6 143 1 3 1536 1830 265 69 110 chrX 124720828 124722304 -41927992 + RLTR19-int LTR ERVK 2505 3881 -2256 3 1536 340 206 27 81 chrX 124722322 124722507 -41927789 + RMER17C LTR ERVK 98 272 -138 3 1536 281 182 92 115 chrX 124722512 124722599 -41927697 + RLTR19-int LTR ERVK 3879 3963 -2174 3 1536 510 17 0 0 chrX 124722631 124722690 -41927606 + (TC)n Simple_repeat Simple_repeat 1 59 0 3 1536 829 237 41 115 chrX 124722766 124723080 -41927216 + RLTR19-int LTR ERVK 4014 4304 -1833 3 1536 321 271 110 74 chrX 124723123 124723286 -41927010 - RLTR24 LTR ERV1 -359 170 2 3 1536 382 270 50 21 chrX 124723748 124723888 -41926408 - L1M4b LINE L1 -5116 2218 2075 3 1536 237 308 24 82 chrX 124723917 124724087 -41926209 - L1M4b LINE L1 -5936 1398 1239 3 1536 1033 86 12 0 chrX 124724185 124724348 -41925948 + (TTC)n Simple_repeat Simple_repeat 3 167 0 3 1536 453 85 73 0 chrX 124724368 124724450 -41925846 - L1_Mur3 LINE L1 -2697 3183 3096 3 1536 295 0 0 0 chrX 124724448 124724489 -41925807 + L1_Mus2 LINE L1 6525 6565 -1 3 1536 355 331 77 26 chrX 124725781 124726131 -41924165 - L1M4 LINE L1 -1820 4326 3959 3 1536 363 60 0 0 chrX 124726211 124726261 -41924035 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1536 354 282 135 15 chrX 124726263 124726396 -41923900 - RSINE1 SINE B4 -13 152 4 3 1536 192 143 0 0 chrX 124726484 124726526 -41923770 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 3 1536 6519 159 13 15 chrX 124726553 124727719 -41922577 - Lx3B LINE L1 -5 6968 5806 3 1536 390 74 0 0 chrX 124727722 124727776 -41922520 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1536 201 122 24 24 chrX 124727778 124727820 -41922476 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1536 637 200 13 26 chrX 124727947 124728101 -41922195 - Lx LINE L1 -10 6644 6493 3 1536 341 342 47 10 chrX 124728116 124728308 -41921988 - L1M4 LINE L1 -2960 3186 2988 3 1536 23 0 0 0 chrX 124728400 124728423 -41921873 + AT_rich Low_complexity Low_complexity 1 23 0 3 1536 23 33 0 0 chrX 124728566 124728596 -41921700 + AT_rich Low_complexity Low_complexity 1 30 0 3 1536 7063 78 23 7 chrX 124728607 124729993 -41920303 - L1Md_F2 LINE L1 -1 6581 5185 3 1536 21245 102 193 14 chrX 124730000 124734546 -41915750 + L1Md_F3 LINE L1 219 5586 -297 3 1536 7514 67 3 2 chrX 124734546 124735529 -41914767 + L1Md_F3 LINE L1 5587 6570 -14 3 1536 5649 99 1 0 chrX 124735531 124736339 -41913957 + L1_Mm LINE L1 4334 5142 -741 3 1536 4703 109 36 14 chrX 124736370 124737844 -41912452 - L1Md_F LINE L1 -3962 1921 415 3 1536 713 188 7 0 chrX 124738011 124738165 -41912131 + GA-rich Low_complexity Low_complexity 2 156 0 3 1536 4700 130 25 3 chrX 124738448 124739203 -41911093 - L1_Mus3 LINE L1 -1 6637 5866 3 1536 5799 143 12 6 chrX 124739203 124740146 -41910150 + L1_Mus3 LINE L1 4895 5842 -41 3 1536 1637 118 0 0 chrX 124740236 124740473 -41909823 + L1_Mus1 LINE L1 6330 6566 -1 3 1536 192 125 0 0 chrX 124740771 124740803 -41909493 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1536 387 73 0 0 chrX 124740803 124740858 -41909438 + (CAGA)n Simple_repeat Simple_repeat 4 58 0 3 1536 24 32 0 0 chrX 124740939 124740970 -41909326 + AT_rich Low_complexity Low_complexity 1 31 0 3 1536 4571 191 27 24 chrX 124741372 124742272 -41908024 + RMER13B LTR ERVK 3 904 -4 3 1536 21 57 0 0 chrX 124743048 124743083 -41907213 + AT_rich Low_complexity Low_complexity 1 35 0 3 1536 25 75 0 0 chrX 124744715 124744768 -41905528 + AT_rich Low_complexity Low_complexity 1 53 0 3 1536 918 85 0 0 chrX 124744809 124744938 -41905358 + (TA)n Simple_repeat Simple_repeat 1 129 0 3 1536 229 354 29 29 chrX 124745392 124745479 -41904817 - MER5A DNA MER1_type -61 128 39 3 1536 2319 243 121 11 chrX 124745479 124746141 -41904155 + RMER19A LTR ERVK 1 735 -2 3 1536 229 354 29 29 chrX 124746141 124746155 -41904141 - MER5A DNA MER1_type -151 38 27 3 1536 210 254 0 0 chrX 124746178 124746237 -41904059 + A-rich Low_complexity Low_complexity 1 59 0 3 1536 1138 78 0 0 chrX 124746529 124746671 -41903625 - B1_Mus1 SINE Alu -5 143 2 3 1536 585 28 0 0 chrX 124746896 124746967 -41903329 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 1536 569 62 25 0 chrX 124746977 124747058 -41903238 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 3 1536 480 35 0 0 chrX 124747917 124747975 -41902321 + (TAAA)n Simple_repeat Simple_repeat 3 60 0 3 1536 331 317 16 40 chrX 124749568 124749693 -41900603 + MLT1A1 LTR MaLR 21 142 -266 3 1536 2122 64 0 0 chrX 124750918 124751182 -41899114 - L1Md_F2 LINE L1 -101 5782 5519 3 1536 6683 46 4 2 chrX 124751182 124752008 -41898288 + L1Md_F2 LINE L1 5753 6579 -3 3 1536 24 0 0 0 chrX 124752159 124752183 -41898113 + AT_rich Low_complexity Low_complexity 1 24 0 3 1536 21 0 0 0 chrX 124752338 124752359 -41897937 + AT_rich Low_complexity Low_complexity 1 21 0 3 1536 2382 229 72 26 chrX 124753101 124753764 -41896532 - Lx4A LINE L1 0 7058 6329 3 1536 5074 208 19 91 chrX 124753758 124755264 -41895032 - L1_Mur2 LINE L1 -2310 3567 2171 3 1536 30 0 0 0 chrX 124755372 124755402 -41894894 + AT_rich Low_complexity Low_complexity 1 30 0 3 1536 4796 55 8 0 chrX 124755800 124756406 -41893890 - L1Md_F2 LINE L1 -14 6568 5958 3 1536 225 180 0 47 chrX 124756444 124756508 -41893788 + A-rich Low_complexity Low_complexity 6 66 0 3 1536 355 306 82 10 chrX 124756865 124756975 -41893321 - L1_Rod LINE L1 -11 5836 5726 3 1536 708 31 70 0 chrX 124756975 124757103 -41893193 + (TA)n Simple_repeat Simple_repeat 2 138 0 4 1536 355 306 72 9 chrX 124757103 124757199 -41893097 - L1_Rod LINE L1 -677 5767 5629 3 1536 341 299 69 76 chrX 124757273 124757418 -41892878 + L1MEg LINE L1 597 740 -5344 4 1536 1474 48 5 0 chrX 124757616 124757803 -41892493 + MTA_Mm-int LTR MaLR 758 945 -153 4 1536 17393 17 4 12 chrX 124757803 124760914 -41889382 - L1Md_A LINE L1 -2630 3253 171 4 1536 3790 12 0 0 chrX 124760912 124761343 -41888953 + L1Md_A LINE L1 5156 5586 -297 4 1536 8374 21 18 0 chrX 124761343 124762321 -41887975 + L1Md_A LINE L1 5587 6582 0 4 1536 1157 53 6 0 chrX 124762326 124762496 -41887800 + MTA_Mm-int LTR MaLR 928 1098 0 4 1536 3185 39 37 0 chrX 124762496 124762878 -41887418 + MTA_Mm LTR MaLR 1 396 0 4 1536 412 236 108 47 chrX 124762889 124763018 -41887278 + Lx8 LINE L1 6530 6666 -807 4 1536 4327 191 25 40 chrX 124763035 124764236 -41886060 - Lx4A LINE L1 -786 6272 5137 3 1536 2392 56 0 3 chrX 124764236 124764542 -41885754 + L1_Mus1 LINE L1 6263 6567 0 4 1536 4327 173 31 25 chrX 124764542 124764973 -41885323 - Lx4A LINE L1 -741 5136 4709 3 1536 26 88 0 0 chrX 124765231 124765299 -41884997 + AT_rich Low_complexity Low_complexity 1 68 0 4 1536 21 0 0 0 chrX 124765357 124765378 -41884918 + AT_rich Low_complexity Low_complexity 1 21 0 4 1536 283 317 12 0 chrX 124765966 124766048 -41884248 - ID4_ SINE ID 0 83 1 4 1536 2441 69 21 12 chrX 124766055 124766394 -41883902 + L1Md_F2 LINE L1 6235 6576 -6 4 1536 21 0 0 0 chrX 124766402 124766423 -41883873 + AT_rich Low_complexity Low_complexity 1 21 0 4 1536 264 309 29 0 chrX 124766481 124766549 -41883747 - ID SINE ID -145 79 10 4 1536 565 336 39 14 chrX 124767015 124767223 -41883073 - B3 SINE B2 -2 214 2 4 1536 23 0 0 0 chrX 124767230 124767253 -41883043 + AT_rich Low_complexity Low_complexity 1 23 0 4 1536 35369 35 0 0 chrX 124767919 124773339 -41876957 + L1Md_T LINE L1 73 5589 -297 4 1536 8903 9 0 0 chrX 124773339 124774335 -41875961 + L1Md_T LINE L1 5590 6585 0 4 1536 1515 125 16 117 chrX 124774436 124774744 -41875552 + ORR1A4 LTR MaLR 1 277 -52 4 1536 34 24 0 0 chrX 124774852 124774893 -41875403 + AT_rich Low_complexity Low_complexity 1 41 0 4 1536 23 54 0 0 chrX 124777227 124777264 -41873032 + AT_rich Low_complexity Low_complexity 1 37 0 4 1536 308 111 3 0 chrX 124777434 124777490 -41872806 - ORR1B2 LTR MaLR 0 367 283 4 1536 4130 70 6 0 chrX 124777490 124778032 -41872264 + L1Md_F2 LINE L1 5041 5585 -298 4 1536 7591 68 2 9 chrX 124778033 124779034 -41871262 + L1Md_F2 LINE L1 5587 6580 -2 4 1536 180 0 0 0 chrX 124779048 124779068 -41871228 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1536 213 39 0 0 chrX 124779066 124779092 -41871204 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 1536 288 111 0 0 chrX 124779117 124779162 -41871134 + (T)n Simple_repeat Simple_repeat 1 45 0 4 1536 234 314 68 10 chrX 124779183 124779286 -41871010 - Lx5 LINE L1 -12 7038 6930 4 1536 2194 186 0 13 chrX 124779276 124779725 -41870571 - L1_Mur2 LINE L1 -4219 1658 1215 4 1536 1673 158 17 67 chrX 124779725 124780071 -41870225 + ORR1A4 LTR MaLR 1 329 0 4 1536 2194 233 30 17 chrX 124780071 124780313 -41869983 - L1_Mur2 LINE L1 -4663 1214 907 4 23 5136 150 11 18 chrX 124780483 124781427 -41868869 - Lx3A LINE L1 0 6981 6045 4 1537 2072 96 9 19 chrX 124781427 124781745 -41868551 + Lx3A LINE L1 5727 6041 -940 4 1537 1821 188 6 18 chrX 124781745 124782076 -41868220 - ORR1B2 LTR MaLR -40 327 1 4 1537 378 0 0 0 chrX 124782632 124782674 -41867622 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 4 1537 1018 106 0 6 chrX 124782688 124782849 -41867447 - L1Md_F2 LINE L1 -12 6570 6411 4 1537 770 249 67 5 chrX 124782906 124783100 -41867196 - MTD LTR MaLR -12 407 202 4 1537 343 193 121 31 chrX 124783535 124783606 -41866690 + B1_Mur2 SINE Alu 31 113 -36 4 1537 2957 95 2 5 chrX 124783606 124784028 -41866268 - BGLII LTR ERVK 0 421 1 4 1537 862 357 117 26 chrX 124784185 124785288 -41865008 + Lx8 LINE L1 6269 7471 -2 4 1537 304 268 88 16 chrX 124785495 124785596 -41864700 - B3A SINE B2 -46 170 63 4 1537 1283 199 3 63 chrX 124785697 124785981 -41864315 - RLTR22_Mur LTR ERVK -3 1845 1579 4 1537 4397 135 39 9 chrX 124786239 124786989 -41863307 - RLTR22_Mur LTR ERVK -1076 772 1 4 1537 393 271 109 8 chrX 124787716 124787783 -41862513 - B1_Mus2 SINE Alu 0 147 69 4 1537 546 258 44 22 chrX 124787783 124787911 -41862385 + B1_Mur3 SINE Alu 1 131 -18 4 1537 1397 171 37 22 chrX 124787911 124788181 -41862115 - ORR1B2 LTR MaLR 0 367 94 4 1537 2138 125 0 0 chrX 124788182 124788501 -41861795 + ORR1A2 LTR MaLR 1 319 -8 4 1537 462 229 85 0 chrX 124788485 124788603 -41861693 - ORR1B2 LTR MaLR -239 128 1 4 1537 358 242 70 0 chrX 124788772 124788900 -41861396 - L1M3 LINE L1 -685 5615 5479 4 1537 893 290 59 58 chrX 124789082 124789707 -41860589 - L1M3 LINE L1 -896 5244 4619 4 1537 662 218 0 7 chrX 124790438 124790581 -41859715 + B1_Mur3 SINE Alu 1 142 -7 4 1537 21 36 0 0 chrX 124790671 124790699 -41859597 + AT_rich Low_complexity Low_complexity 1 28 0 4 1537 566 12 48 0 chrX 124791399 124791482 -41858814 + (TC)n Simple_repeat Simple_repeat 1 87 0 4 1537 801 204 6 29 chrX 124791496 124791668 -41858628 + ORR1B2 LTR MaLR 200 367 0 4 1537 412 288 28 72 chrX 124791668 124791922 -41858374 - Lx6 LINE L1 -551 5740 5513 4 1537 216 0 0 0 chrX 124792070 124792094 -41858202 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1537 302 0 0 0 chrX 124792099 124792134 -41858162 + U2 snRNA snRNA 1 35 -153 4 1537 805 200 59 35 chrX 124792658 124792878 -41857418 - RLTR25A LTR ERVK 0 1103 832 4 1537 227 180 80 0 chrX 124792978 124793028 -41857268 - U7 snRNA snRNA -2 61 8 4 1537 231 322 17 0 chrX 124794148 124794207 -41856089 + ID4_ SINE ID 21 80 -3 4 1537 356 250 12 0 chrX 124794699 124794783 -41855513 - MTEb LTR MaLR -294 85 1 4 1537 28 29 0 0 chrX 124795118 124795153 -41855143 + AT_rich Low_complexity Low_complexity 1 35 0 4 1537 24 32 0 0 chrX 124795367 124795398 -41854898 + AT_rich Low_complexity Low_complexity 1 31 0 4 1537 327 194 0 0 chrX 124795722 124795784 -41854512 - ORR1B2 LTR MaLR -5 362 301 4 1537 336 261 33 33 chrX 124797818 124797909 -41852387 - ID_B1 SINE B4 -48 176 86 4 1537 283 367 29 39 chrX 124798090 124798294 -41852002 - Charlie2b DNA MER1_type -2577 205 4 4 1537 605 207 296 6 chrX 124798547 124798778 -41851518 - ORR1D1 LTR MaLR 0 374 92 4 1537 1656 207 94 25 chrX 124798811 124799203 -41851093 - ORR1D1-int LTR MaLR -951 419 1 4 1537 1370 199 174 0 chrX 124799205 124799522 -41850774 - ORR1D1 LTR MaLR 0 374 3 4 1537 320 346 0 0 chrX 124799941 124800042 -41850254 - B1F1 SINE Alu -6 143 43 4 1537 503 31 15 0 chrX 124800057 124800122 -41850174 + (TTTA)n Simple_repeat Simple_repeat 3 68 0 4 1537 1282 55 0 0 chrX 124800122 124800280 -41850016 - B2_Mm1a SINE B2 -28 165 8 4 1537 503 112 0 72 chrX 124800323 124800448 -41849848 + L1Md_F2 LINE L1 6467 6582 0 4 1537 183 42 0 0 chrX 124800930 124800954 -41849342 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1537 352 240 87 39 chrX 124800965 124801069 -41849227 - B1_Mur1 SINE Alu 0 149 41 4 1537 207 0 0 0 chrX 124802461 124802484 -41847812 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 1537 1589 238 12 0 chrX 124802484 124802816 -41847480 - ORR1B1 LTR MaLR -58 336 1 4 1537 684 113 0 50 chrX 124803520 124803641 -41846655 - RMER6C LTR ERVK -158 532 418 4 1537 4080 33 0 28 chrX 124803650 124804146 -41846150 - LTRIS_Mm LTR ERV1 0 482 1 4 1537 3875 160 16 49 chrX 124804201 124804739 -41845557 - RLTR19B LTR ERVK 0 715 195 4 1537 5810 63 0 7 chrX 124804739 124805493 -41844803 + L1Md_F2 LINE L1 5822 6570 -12 4 1537 3875 160 16 49 chrX 124805493 124805691 -41844605 - RLTR19B LTR ERVK -521 194 3 4 1537 514 194 261 11 chrX 124805692 124805970 -41844326 - RMER6C LTR ERVK -308 382 1 4 1537 276 249 116 47 chrX 124805989 124806179 -41844117 + L1MEc LINE L1 1389 1591 -4809 4 1537 818 129 15 1 chrX 124806304 124806442 -41843854 - B1_Mus1 SINE Alu 0 150 4 4 1537 601 278 73 34 chrX 124806442 124806521 -41843775 - B4 SINE B4 -195 97 11 4 1537 23 54 0 0 chrX 124806540 124806577 -41843719 + AT_rich Low_complexity Low_complexity 1 37 0 4 1537 4525 180 113 3 chrX 124806968 124807033 -41843263 + L1_Mur2 LINE L1 4053 4117 -1760 4 1537 450 0 0 0 chrX 124807033 124807083 -41843213 + (CAAAA)n Simple_repeat Simple_repeat 3 52 0 4 1537 4525 180 113 3 chrX 124807083 124808019 -41842277 + L1_Mur2 LINE L1 4118 5163 -714 4 1537 234 0 0 0 chrX 124808035 124808061 -41842235 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 1537 290 261 0 0 chrX 124808070 124808139 -41842157 - 4.5SRNA scRNA scRNA -15 79 11 4 1537 4495 175 25 11 chrX 124808139 124809299 -41840997 + Lx2B LINE L1 6137 6978 -22 4 1537 462 62 62 0 chrX 124809301 124809382 -41840914 + (GAAA)n Simple_repeat Simple_repeat 3 88 0 4 1537 242 293 28 21 chrX 124809533 124809676 -41840620 - L1M3 LINE L1 -2582 3558 3415 4 1537 11225 131 47 9 chrX 124811028 124811743 -41838553 + Lx3B LINE L1 3892 4634 -1252 4 1537 207 0 0 0 chrX 124811743 124811766 -41838530 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 4 1537 11225 130 29 15 chrX 124811766 124814063 -41836233 + Lx3B LINE L1 4635 6970 -3 4 1537 379 352 6 66 chrX 124815228 124815395 -41834901 + RSINE1 SINE B4 6 162 -3 4 1537 285 86 34 17 chrX 124815413 124815472 -41834824 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 1537 1132 62 7 0 chrX 124815648 124815793 -41834503 + B1_Mus2 SINE Alu 2 147 0 4 1537 269 51 0 25 chrX 124815795 124815835 -41834461 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1537 637 355 15 20 chrX 124815839 124816040 -41834256 + B4A SINE B4 3 202 -90 4 1537 291 54 0 0 chrX 124816143 124816180 -41834116 + (TCTA)n Simple_repeat Simple_repeat 3 39 0 4 1537 305 270 16 0 chrX 124816354 124816417 -41833879 + L1_Mur3 LINE L1 303 366 -7362 4 1537 4194 205 42 48 chrX 124816624 124817595 -41832701 + L1_Mur3 LINE L1 780 1757 -4123 4 1537 1087 97 0 7 chrX 124817595 124817740 -41832556 - B1_Mus2 SINE Alu -1 146 3 4 1537 4194 200 47 77 chrX 124817740 124818476 -41831820 + L1_Mur3 LINE L1 1758 2466 -3414 4 1537 4234 61 0 42 chrX 124818480 124819050 -41831246 + L1Md_F2 LINE L1 6030 6582 0 4 1537 1998 235 22 54 chrX 124819050 124819747 -41830549 + Lx7 LINE L1 5542 6239 -1457 4 1537 688 279 16 10 chrX 124819751 124819943 -41830353 + Lx7 LINE L1 6403 6595 -865 4 1537 8558 108 34 16 chrX 124819941 124821618 -41828678 + Lx3_Mus LINE L1 5287 7009 0 4 1537 213 39 0 0 chrX 124821685 124821711 -41828585 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 1537 489 34 0 0 chrX 124822434 124822493 -41827803 + (TAA)n Simple_repeat Simple_repeat 1 59 0 4 1537 2936 246 94 51 chrX 124822493 124823515 -41826781 + Lx7 LINE L1 6631 7696 0 4 1537 444 236 45 0 chrX 124823530 124823619 -41826677 + MTC LTR MaLR 196 288 -133 4 1537 2683 154 16 2 chrX 124823899 124824341 -41825955 + Lx3A LINE L1 6515 6962 -19 4 1537 332 105 0 34 chrX 124824342 124824401 -41825895 + (TAA)n Simple_repeat Simple_repeat 1 57 0 4 1537 21 0 0 0 chrX 124824439 124824460 -41825836 + AT_rich Low_complexity Low_complexity 1 21 0 5 1537 837 215 104 10 chrX 124825361 124825563 -41824733 - URR1A DNA MER1_type 0 226 6 5 1537 234 367 47 55 chrX 124826032 124826159 -41824137 + MIRb SINE MIR 17 142 -126 5 1537 630 126 0 0 chrX 124826539 124826642 -41823654 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 5 1537 253 359 39 15 chrX 124826701 124826831 -41823465 - Lx8 LINE L1 -180 7293 7161 5 1537 353 246 158 44 chrX 124827579 124827748 -41822548 - RLTR31B_Mm LTR ERVK 0 584 412 5 1537 589 275 126 94 chrX 124827982 124828396 -41821900 + RLTR14-int LTR ERV1 3777 4210 -1107 5 1537 506 83 24 0 chrX 124828396 124828480 -41821816 + (CAGAGA)n Simple_repeat Simple_repeat 5 90 0 5 1537 589 275 126 94 chrX 124828480 124828659 -41821637 + RLTR14-int LTR ERV1 4211 4389 -928 5 1537 378 183 0 0 chrX 124829261 124829332 -41820964 + RLTR14-int LTR ERV1 4761 4831 -486 5 1537 251 200 0 0 chrX 124829611 124829656 -41820640 + RLTR14-int LTR ERV1 4909 4953 -364 5 1537 744 119 0 0 chrX 124829659 124829777 -41820519 + (TC)n Simple_repeat Simple_repeat 1 118 0 5 1537 984 105 28 0 chrX 124829778 124829921 -41820375 - B1_Mus1 SINE Alu -1 147 1 5 1537 945 301 23 44 chrX 124829921 124830307 -41819989 + RLTR14-int LTR ERV1 4940 5317 0 5 1537 351 325 25 38 chrX 124830582 124830742 -41819554 + RLTR14 LTR ERV1 225 382 0 5 1537 268 338 78 59 chrX 124831061 124831527 -41818769 + MURVY-int LTR ERV1 3388 3660 -3792 5 1537 201 154 0 0 chrX 124831927 124831966 -41818330 + T-rich Low_complexity Low_complexity 4 42 0 5 1537 385 235 17 100 chrX 124832610 124832790 -41817506 - RNLTR23 LTR ERVK 0 642 478 5 1537 396 0 0 0 chrX 124833761 124833805 -41816491 + (TA)n Simple_repeat Simple_repeat 1 44 0 5 1537 288 0 0 0 chrX 124833805 124833836 -41816460 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 1537 279 0 0 0 chrX 124835679 124835710 -41814586 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5 1537 193 267 54 54 chrX 124836297 124836408 -41813888 + L3 LINE CR1 1325 1435 -3054 5 1537 294 29 0 0 chrX 124836736 124836771 -41813525 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1537 277 278 0 10 chrX 124837453 124837551 -41812745 + Lx9 LINE L1 7389 7485 -159 5 1537 444 37 0 0 chrX 124837551 124837605 -41812691 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1537 254 275 0 0 chrX 124838824 124838893 -41811403 + A-rich Low_complexity Low_complexity 1 69 0 5 1537 216 0 0 0 chrX 124838962 124838986 -41811310 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1537 2007 186 84 37 chrX 124839111 124839685 -41810611 + RLTR19-int LTR ERVK 201 801 -4605 5 1537 7444 69 7 1 chrX 124839696 124840953 -41809343 - L1Md_F2 LINE L1 -17 6565 5299 5 1537 948 184 6 0 chrX 124840948 124841127 -41809169 + L1Md_A LINE L1 668 847 -5877 5 1537 391 182 101 11 chrX 124841137 124841226 -41809070 + RLTR19-int LTR ERVK 795 891 -4515 5 1537 1216 96 5 5 chrX 124841226 124841414 -41808882 - MusHAL1 LINE L1 -1976 736 549 5 1537 14083 163 17 7 chrX 124841409 124843993 -41806303 + L1_Mus3 LINE L1 3258 5864 -19 5 1537 471 35 0 0 chrX 124843993 124844050 -41806246 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 5 1537 14083 123 11 1003 chrX 124844050 124844810 -41805486 + L1_Mus3 LINE L1 5865 6634 -4 5 1537 497 102 98 33 chrX 124844826 124844948 -41805348 + RLTR19-int LTR ERVK 1259 1388 -4749 5 1537 2163 166 12 19 chrX 124844932 124845343 -41804953 + RLTR19-int LTR ERVK 3568 3975 -2162 5 1537 27 0 0 0 chrX 124845366 124845393 -41804903 + AT_rich Low_complexity Low_complexity 1 27 0 5 1537 25 108 0 0 chrX 124845482 124845584 -41804712 + AT_rich Low_complexity Low_complexity 1 102 0 5 1537 237 140 62 53 chrX 124845608 124845721 -41804575 + (TTATA)n Simple_repeat Simple_repeat 1 114 0 5 1537 8706 50 2 0 chrX 124845721 124847496 -41802800 - L1Md_F2 LINE L1 -7 6575 4798 5 1537 918 121 35 0 chrX 124847517 124847658 -41802638 + B1_Mus2 SINE Alu 2 147 0 5 1537 366 147 0 0 chrX 124847665 124847733 -41802563 + (TA)n Simple_repeat Simple_repeat 2 69 0 5 1537 21 0 0 0 chrX 124847743 124847764 -41802532 + AT_rich Low_complexity Low_complexity 1 21 0 5 1537 21 0 0 0 chrX 124847815 124847836 -41802460 + AT_rich Low_complexity Low_complexity 1 21 0 5 1537 234 100 11 81 chrX 124847839 124847926 -41802370 + (TATAA)n Simple_repeat Simple_repeat 5 85 0 5 1537 246 32 0 0 chrX 124848032 124848063 -41802233 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 1537 2654 77 9 80 chrX 124848137 124848573 -41801723 - L1Md_F2 LINE L1 0 6582 6178 5 1537 1301 182 7 132 chrX 124848590 124848894 -41801402 + RMER16-int LTR ERVK 3674 3939 -1467 5 1537 898 323 89 70 chrX 124848934 124849396 -41800900 + L1_Rod LINE L1 1373 1843 -4037 5 1537 1068 88 0 26 chrX 124849396 124849547 -41800749 + B1_Mm SINE Alu 1 147 0 5 1537 935 313 122 24 chrX 124849547 124850760 -41799536 + L1_Rod LINE L1 1834 3121 -3022 5 1537 4535 157 149 2 chrX 124850762 124851696 -41798600 - Lx3_Mus LINE L1 -1258 4619 3549 5 1537 8660 123 43 8 chrX 124851688 124854011 -41796285 + Lx3_Mus LINE L1 4592 7004 -5 5 1537 298 331 34 10 chrX 124854070 124854363 -41795933 + L1_Rod LINE L1 3138 3437 -2443 5 1537 1653 194 40 20 chrX 124854386 124854738 -41795558 + RMER6C LTR ERVK 1 359 -331 5 1537 299 269 25 0 chrX 124854747 124854866 -41795430 + (CAGTT)n Simple_repeat Simple_repeat 5 126 0 5 1537 405 0 0 0 chrX 124854886 124854931 -41795365 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1537 2780 253 37 6 chrX 124854931 124855582 -41794714 - Lx5 LINE L1 -9 7041 6371 5 1537 3605 215 33 72 chrX 124855582 124856155 -41794141 - RMER17B LTR ERVK 0 958 436 5 1537 474 18 0 0 chrX 124856155 124856210 -41794086 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1537 3605 215 33 72 chrX 124856210 124856633 -41793663 - RMER17B LTR ERVK -523 435 1 5 1537 3216 226 37 26 chrX 124856633 124857105 -41793191 - Lx5 LINE L1 -674 6376 5890 5 1537 2187 55 14 3 chrX 124857105 124857395 -41792901 + L1_Mus2 LINE L1 6273 6565 -1 5 1537 6942 182 33 53 chrX 124857395 124858668 -41791628 - Lx5 LINE L1 -1161 5889 4630 5 1537 252 0 0 0 chrX 124858668 124858696 -41791600 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1537 6942 181 33 54 chrX 124858696 124859000 -41791296 - Lx5 LINE L1 -1248 4629 4346 5 1537 1032 239 36 18 chrX 124859098 124859375 -41790921 + Lx9 LINE L1 7176 7457 -187 5 1537 570 54 0 0 chrX 124859375 124859449 -41790847 + (TA)n Simple_repeat Simple_repeat 1 74 0 5 1537 366 123 0 0 chrX 124859462 124859519 -41790777 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1537 243 202 17 68 chrX 124859533 124859650 -41790646 + Lx9 LINE L1 7534 7644 0 5 1537 483 286 36 82 chrX 124859688 124859882 -41790414 - B3A SINE B2 -12 186 2 5 1537 345 274 9 9 chrX 124860740 124860847 -41789449 - MLT1A LTR MaLR 0 374 268 5 1537 1341 310 54 67 chrX 124861190 124861396 -41788900 + L1MA7 LINE L1 4837 5033 -814 5 1537 2890 51 11 0 chrX 124861396 124861747 -41788549 + IAPEY2_LTR LTR ERVK 1 355 -2 5 1537 1341 310 54 67 chrX 124861747 124861884 -41788412 + L1MA7 LINE L1 5034 5145 -702 5 1537 185 0 40 0 chrX 124861884 124861909 -41788387 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 1537 1341 300 96 28 chrX 124861909 124862602 -41787694 + L1MA7 LINE L1 5146 5936 -355 5 1537 331 343 127 72 chrX 124863307 124864001 -41786295 + L1M4c LINE L1 1261 1992 -4858 5 1537 237 243 103 0 chrX 124864014 124864121 -41786175 + L1M4c LINE L1 2405 2522 -4327 5 1537 702 229 28 21 chrX 124864135 124864278 -41786018 + B1_Mur4 SINE Alu 6 149 -1 5 1537 369 238 73 24 chrX 124864294 124864458 -41785838 + L1M4c LINE L1 1661 1832 -4552 5 1537 1521 155 123 7 chrX 124864470 124864762 -41785534 + RMER6C LTR ERVK 1 326 -364 5 1537 399 41 0 0 chrX 124864896 124864945 -41785351 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 1537 2359 202 88 66 chrX 124865012 124865663 -41784633 - RMER17B LTR ERVK -293 665 1 5 1537 252 344 146 31 chrX 124865773 124865859 -41784437 + MTEa LTR MaLR 47 145 -234 5 1537 414 0 0 0 chrX 124865859 124865905 -41784391 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1537 378 0 0 0 chrX 124865905 124865946 -41784350 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1537 352 242 62 29 chrX 124865947 124866112 -41784184 + B3A SINE B2 4 176 -19 5 1537 859 287 14 0 chrX 124866130 124866339 -41783957 + MTEa LTR MaLR 168 379 0 5 1537 684 352 63 30 chrX 124866653 124866984 -41783312 - ORR1E LTR MaLR -5 354 13 5 1537 21 0 0 0 chrX 124867908 124867929 -41782367 + AT_rich Low_complexity Low_complexity 1 21 0 5 1537 315 283 75 80 chrX 124868382 124868570 -41781726 + MIR SINE MIR 51 237 -25 5 1537 1660 256 155 8 chrX 124868740 124869231 -41781065 - Lx5 LINE L1 -10 7040 6478 5 1537 180 420 0 10 chrX 124869450 124869551 -41780745 + L2b LINE L2 3055 3154 -221 5 1537 285 29 0 0 chrX 124870094 124870128 -41780168 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1537 418 309 96 17 chrX 124870473 124870651 -41779645 + RMER15 LTR ERVL 372 563 -12 5 1537 21 0 0 0 chrX 124870717 124870738 -41779558 + AT_rich Low_complexity Low_complexity 1 21 0 5 1537 230 322 60 45 chrX 124871039 124871171 -41779125 - ID_B1 SINE B4 -17 207 71 5 1537 24 53 0 0 chrX 124872374 124872412 -41777884 + AT_rich Low_complexity Low_complexity 1 38 0 5 1537 1208 62 0 6 chrX 124872494 124872656 -41777640 + L1Md_T LINE L1 6421 6581 -1 5 1537 189 107 0 0 chrX 124873214 124873242 -41777054 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1537 2154 121 36 19 chrX 124873242 124873269 -41777027 - Lx LINE L1 0 6654 6630 5 1537 453 81 0 0 chrX 124873269 124873331 -41776965 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 1537 2154 121 36 19 chrX 124873331 124873342 -41776954 - Lx LINE L1 -25 6629 6622 5 1537 5770 66 0 1 chrX 124873342 124874081 -41776215 - L1Md_F2 LINE L1 -15 6567 5830 5 1537 2154 121 36 19 chrX 124874081 124874404 -41775892 - Lx LINE L1 -33 6621 6287 5 1537 43 47 0 0 chrX 124875119 124875183 -41775113 + AT_rich Low_complexity Low_complexity 1 64 0 5 1537 557 13 0 13 chrX 124875351 124875429 -41774867 - L1Md_F3 LINE L1 -12 6572 6496 5 1537 4050 174 126 28 chrX 124875566 124876454 -41773842 - RLTR13C1 LTR ERVK 0 983 9 5 1537 251 263 79 0 chrX 124876461 124876537 -41773759 + Lx8 LINE L1 6774 6855 -618 5 1537 646 262 96 7 chrX 124876663 124876809 -41773487 + Lx8 LINE L1 7115 7273 -200 5 1537 276 257 0 14 chrX 124876769 124876840 -41773456 + RMER1C Other Other 1124 1193 -149 5 1537 441 315 95 34 chrX 124877692 124877840 -41772456 - MTD LTR MaLR -262 157 1 5 1537 948 218 91 25 chrX 124877895 124878093 -41772203 - B3 SINE B2 0 216 6 5 1537 481 257 17 26 chrX 124878166 124878282 -41772014 + B1_Mur2 SINE Alu 33 147 -2 5 1537 261 188 47 0 chrX 124878756 124878820 -41771476 - L1MB8 LINE L1 -2 6176 6110 5 1537 41 96 0 0 chrX 124879017 124879142 -41771154 + AT_rich Low_complexity Low_complexity 1 125 0 5 1537 8802 145 9 4 chrX 124879809 124882097 -41768199 - L1_Mus4 LINE L1 -1 6635 4331 5 1537 210 143 0 0 chrX 124882099 124882148 -41768148 + (TTTTTA)n Simple_repeat Simple_repeat 6 54 0 5 1537 29 0 0 0 chrX 124882160 124882189 -41768107 + AT_rich Low_complexity Low_complexity 1 29 0 5 1537 1267 130 5 5 chrX 124882189 124882405 -41767891 - Lx3_Mus LINE L1 0 7009 6794 5 1537 1987 127 3 13 chrX 124882415 124882719 -41767577 + Lx3_Mus LINE L1 6522 6822 -187 5 1537 1787 144 0 0 chrX 124882717 124883008 -41767288 - L1_Mur2 LINE L1 -1535 4342 4052 5 1537 1701 141 13 10 chrX 124883000 124883300 -41766996 + MusHAL1 LINE L1 539 839 -1873 5 1537 1105 131 22 11 chrX 124883300 124883485 -41766811 + B2_Mm2 SINE B2 9 195 0 6 1537 11196 157 14 16 chrX 124883512 124885582 -41764714 + L1_Mm LINE L1 2029 4096 -1787 6 1537 1140 82 0 0 chrX 124885627 124885773 -41764523 - B1_Mus2 SINE Alu 0 147 2 6 1537 24 0 0 0 chrX 124886377 124886401 -41763895 + AT_rich Low_complexity Low_complexity 1 24 0 6 1537 358 395 38 45 chrX 124886778 124887067 -41763229 + LTR75 LTR ERVL 22 308 -254 6 1537 447 19 0 0 chrX 124887370 124887422 -41762874 + (TA)n Simple_repeat Simple_repeat 1 52 0 6 1537 2033 162 56 8 chrX 124887840 124888213 -41762083 + RLTR9D LTR ERVK 5 395 -8 6 1537 239 118 77 19 chrX 124890996 124891048 -41759248 + L1MC3 LINE L1 7377 7431 -354 6 1537 841 189 25 0 chrX 124891329 124891488 -41758808 + URR1A DNA MER1_type 48 210 -16 6 1537 767 193 7 0 chrX 124891514 124891649 -41758647 - Lx8 LINE L1 -377 7096 6961 6 1537 663 332 20 68 chrX 124891693 124891987 -41758309 - Lx8 LINE L1 -681 6792 6513 6 1537 406 344 88 0 chrX 124893705 124893830 -41756466 + ID_B1 SINE B4 78 213 -11 6 1537 807 288 179 26 chrX 124894068 124894233 -41756063 + MTC LTR MaLR 20 189 -232 6 1537 333 0 0 0 chrX 124894233 124894270 -41756026 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1537 531 0 0 0 chrX 124894270 124894328 -41755968 + (TA)n Simple_repeat Simple_repeat 1 59 0 6 1537 807 288 179 26 chrX 124894328 124894507 -41755789 + MTC LTR MaLR 190 416 -5 6 1537 4102 226 55 92 chrX 124894563 124895568 -41754728 + RMER1A Other Other 1 872 -158 6 1537 582 15 0 0 chrX 124895568 124895635 -41754661 + (TC)n Simple_repeat Simple_repeat 1 67 0 6 1537 297 109 0 0 chrX 124895636 124895682 -41754614 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1537 4102 224 56 96 chrX 124895682 124895799 -41754497 + RMER1A Other Other 873 1025 -5 6 1537 486 88 0 0 chrX 124895997 124896065 -41754231 + (TA)n Simple_repeat Simple_repeat 2 69 0 6 1537 11155 29 1 0 chrX 124896153 124897478 -41752818 + L1Md_T LINE L1 4261 5586 -297 6 1537 8931 8 0 0 chrX 124897478 124898474 -41751822 + L1Md_T LINE L1 5587 6582 0 6 1537 450 94 0 0 chrX 124898486 124898550 -41751746 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 1537 955 148 51 11 chrX 124898997 124899175 -41751121 + B2_Mm2 SINE B2 3 187 -8 6 1537 1005 291 135 3 chrX 124899811 124900138 -41750158 + ORR1D2 LTR MaLR 1 370 0 6 1537 1959 214 94 18 chrX 124900138 124900638 -41749658 + ORR1D2-int LTR MaLR 1 538 -832 6 1537 2738 276 104 8 chrX 124901060 124901830 -41748466 + ORR1D2-int LTR MaLR 527 1370 0 6 1537 544 290 47 21 chrX 124901830 124901993 -41748303 + ORR1D2 LTR MaLR 1 167 -207 6 1537 1076 101 6 0 chrX 124901993 124902171 -41748125 + (TTC)n Simple_repeat Simple_repeat 2 180 0 6 1537 544 290 47 21 chrX 124902171 124902197 -41748099 + ORR1D2 LTR MaLR 168 194 -180 6 1537 543 247 55 43 chrX 124902241 124902460 -41747836 + ORR1D2 LTR MaLR 158 374 0 6 1537 1205 290 139 28 chrX 124902469 124902930 -41747366 + RLTR18B LTR ERVK 1 512 0 6 1537 26 82 0 0 chrX 124902979 124903040 -41747256 + AT_rich Low_complexity Low_complexity 1 61 0 6 1537 483 301 11 80 chrX 124903449 124903637 -41746659 - ORR1D2 LTR MaLR -16 354 180 6 1537 753 221 10 73 chrX 124904653 124904858 -41745438 - B2_Mm2 SINE B2 -2 193 2 6 1537 657 0 0 0 chrX 124904974 124905047 -41745249 + (TTTC)n Simple_repeat Simple_repeat 1 73 0 6 1537 23 0 0 0 chrX 124905106 124905129 -41745167 + AT_rich Low_complexity Low_complexity 1 23 0 6 1537 612 50 0 0 chrX 124905337 124905417 -41744879 + (TC)n Simple_repeat Simple_repeat 1 80 0 6 1537 219 36 0 0 chrX 124905417 124905445 -41744851 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1537 448 339 53 78 chrX 124905547 124905790 -41744506 - MamSINE1 SINE tRNA -1 289 53 6 1537 1644 209 63 17 chrX 124906290 124906552 -41743744 - ORR1C2 LTR MaLR 0 384 114 6 1537 2132 47 22 0 chrX 124906552 124906828 -41743468 + L1Md_F2 LINE L1 6300 6581 -1 6 1537 1644 209 63 17 chrX 124906828 124906916 -41743380 - ORR1C2 LTR MaLR -271 113 18 6 1537 271 204 0 0 chrX 124906931 124906980 -41743316 - MERVL_2A-int LTR ERVL -1067 4694 4646 6 1537 437 215 219 18 chrX 124907491 124907787 -41742509 + MT2B LTR ERVL 1 373 -120 6 1537 318 194 0 0 chrX 124907791 124907863 -41742433 + (TG)n Simple_repeat Simple_repeat 2 73 0 6 1537 308 91 0 0 chrX 124907875 124907919 -41742377 + MT2B LTR ERVL 486 529 -4 6 1537 942 130 6 29 chrX 124908245 124908419 -41741877 - Lx LINE L1 -7 6647 6478 6 1537 235 219 16 0 chrX 124908998 124909062 -41741234 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 1538 21 0 0 0 chrX 124911985 124912006 -41738290 + AT_rich Low_complexity Low_complexity 1 21 0 6 1538 330 234 24 83 chrX 124912210 124912294 -41738002 - PB1 SINE Alu -3 124 46 6 1538 531 56 0 0 chrX 124912614 124912685 -41737611 + (TG)n Simple_repeat Simple_repeat 2 72 0 6 1538 302 222 173 48 chrX 124912776 124912984 -41737312 - MER33 DNA MER1_type -22 302 69 6 1538 16988 91 18 1 chrX 124913591 124916671 -41733625 + L1Md_F LINE L1 459 3592 -2291 6 1538 7062 86 11 8 chrX 124916674 124917655 -41732641 + L1Md_F2 LINE L1 5587 6570 -12 6 1538 22 56 0 0 chrX 124917684 124917720 -41732576 + AT_rich Low_complexity Low_complexity 1 36 0 6 1538 486 0 0 0 chrX 124918339 124918393 -41731903 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 1538 22 35 0 0 chrX 124918513 124918542 -41731754 + AT_rich Low_complexity Low_complexity 1 29 0 6 1538 1565 103 8 4 chrX 124918818 124919052 -41731244 - L1_Mus3 LINE L1 0 6638 6404 6 1538 1388 191 108 7 chrX 124919271 124919566 -41730730 - ORR1B2 LTR MaLR 0 367 43 6 1538 226 54 50 75 chrX 124921059 124921099 -41729197 - Arthur1 DNA Tip100 -1337 2610 2572 6 1538 354 23 0 0 chrX 124921788 124921831 -41728465 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1538 671 83 9 0 chrX 124922165 124922273 -41728023 + (TC)n Simple_repeat Simple_repeat 2 110 0 6 1538 773 317 24 47 chrX 124922379 124922677 -41727619 + B4 SINE B4 2 292 0 6 1538 528 333 36 0 chrX 124923012 124923180 -41727116 + B3 SINE B2 5 178 -38 6 1538 19754 201 50 43 chrX 124924168 124925179 -41725117 + Lx5 LINE L1 867 1899 -3978 6 1538 2740 86 28 15 chrX 124925179 124925570 -41724726 + MTA_Mm LTR MaLR 1 396 0 6 1538 19754 186 48 36 chrX 124925570 124926315 -41723981 + Lx5 LINE L1 1900 2788 -3089 6 1538 1776 174 3 34 chrX 124926315 124926636 -41723660 + RLTR10E LTR ERVK 1 311 0 6 1538 19754 197 47 33 chrX 124926636 124930932 -41719364 + Lx5 LINE L1 2789 7050 0 6 1538 24 0 0 0 chrX 124930934 124930958 -41719338 + AT_rich Low_complexity Low_complexity 1 24 0 6 1538 5007 181 53 6 chrX 124930958 124932005 -41718291 + L1_Mur2 LINE L1 3919 5015 -862 6 1538 1327 243 35 3 chrX 124932344 124932711 -41717585 + L1_Mur1 LINE L1 886 1264 -5718 6 1538 282 328 49 78 chrX 124932817 124933022 -41717274 + ORR1D2 LTR MaLR 8 206 -164 6 1538 30 0 0 0 chrX 124933157 124933187 -41717109 + AT_rich Low_complexity Low_complexity 1 30 0 6 1538 243 0 0 0 chrX 124933202 124933229 -41717067 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 6 1538 515 301 0 14 chrX 124933487 124933625 -41716671 - B1_Mur2 SINE Alu -10 139 4 6 1538 193 307 84 42 chrX 124933882 124934001 -41716295 + MER5A DNA MER1_type 38 161 -28 6 1538 798 310 102 40 chrX 124934197 124934397 -41715899 + Lx8 LINE L1 6088 6291 -1182 6 1538 252 0 0 0 chrX 124934397 124934425 -41715871 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 1538 798 310 102 40 chrX 124934425 124934704 -41715592 + Lx8 LINE L1 6292 6597 -876 6 1538 33230 78 2 18 chrX 124934708 124938941 -41711355 - L1Md_F2 LINE L1 -3 6579 2355 6 1538 288 0 0 0 chrX 124938941 124938973 -41711323 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 6 1538 33230 82 1 22 chrX 124938973 124938986 -41711310 - L1Md_F2 LINE L1 -3529 2354 2347 6 1538 225 0 0 0 chrX 124938986 124939011 -41711285 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 6 1538 33230 82 1 22 chrX 124939011 124940224 -41710072 - L1Md_F2 LINE L1 -3537 2346 1218 6 1538 291 275 45 51 chrX 124940230 124940387 -41709909 + Lx7 LINE L1 7145 7300 -396 6 1538 573 42 0 0 chrX 124940576 124940648 -41709648 + (GTTTG)n Simple_repeat Simple_repeat 2 73 0 6 1538 868 268 136 84 chrX 124940972 124941318 -41708978 + ORR1D1 LTR MaLR 3 366 -8 6 1538 27 29 0 0 chrX 124941412 124941446 -41708850 + AT_rich Low_complexity Low_complexity 1 34 0 6 1538 348 43 0 0 chrX 124941854 124941900 -41708396 + (TTTTG)n Simple_repeat Simple_repeat 4 49 0 6 1538 464 171 9 0 chrX 124942297 124942408 -41707888 + (TA)n Simple_repeat Simple_repeat 2 113 0 6 1538 21 0 0 0 chrX 124942783 124942804 -41707492 + AT_rich Low_complexity Low_complexity 1 21 0 6 1538 7388 101 10 33 chrX 124942865 124944469 -41705827 - L1_Mus3 LINE L1 0 6638 5115 6 1538 1218 184 9 5 chrX 124944473 124944697 -41705599 - URR1B DNA MER1_type 0 225 1 6 1538 298 349 102 11 chrX 124944838 124945015 -41705281 + MLT1A1 LTR MaLR 1 193 -172 6 1538 1042 288 68 3 chrX 124945032 124945209 -41705087 - MTE2b LTR MaLR 0 379 190 6 1538 647 227 8 0 chrX 124945209 124945341 -41704955 + B1_Mur3 SINE Alu 1 133 -16 6 1538 1042 288 68 3 chrX 124945341 124945487 -41704809 - MTE2b LTR MaLR -190 189 36 6 1538 885 213 0 36 chrX 124945484 124945679 -41704617 + URR1A DNA MER1_type 38 225 -1 6 1538 9384 147 38 26 chrX 124945744 124948031 -41702265 + L1Md_F LINE L1 409 2722 -3161 6 1538 4164 77 2 35 chrX 124948031 124948610 -41701686 + L1_Mus2 LINE L1 6007 6566 0 6 1538 386 286 97 8 chrX 124948648 124948782 -41701514 + MLT1A1 LTR MaLR 257 402 -6 6 1538 447 35 0 0 chrX 124950531 124950588 -41699708 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1538 13932 226 351 10 chrX 124950949 124951257 -41699039 + L1_Mur2 LINE L1 822 1233 -4644 6 1538 1223 74 11 6 chrX 124951257 124951434 -41698862 + L1Md_F3 LINE L1 6406 6583 -1 6 1538 13932 175 25 29 chrX 124951434 124954391 -41695905 + L1_Mur2 LINE L1 1234 4180 -1697 6 1538 19052 195 30 62 chrX 124954717 124958210 -41692086 + Lx5 LINE L1 704 3978 -1899 6 1538 384 59 0 0 chrX 124958210 124958261 -41692035 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1538 19052 193 24 69 chrX 124958261 124958902 -41691394 + Lx5 LINE L1 3979 4623 -1254 6 1538 360 0 0 0 chrX 124958902 124958942 -41691354 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 6 1538 19052 193 24 69 chrX 124958942 124959144 -41691152 + Lx5 LINE L1 4624 4835 -1042 6 1538 3035 82 0 2 chrX 124959144 124959545 -41690751 - MTB LTR MaLR 0 400 1 6 1538 19052 212 33 42 chrX 124959545 124961546 -41688750 + Lx5 LINE L1 4836 6875 -175 6 1538 776 226 44 80 chrX 124961546 124961727 -41688569 + RMER13B LTR ERVK 1 211 -431 6 1538 2894 32 15 0 chrX 124961727 124962068 -41688228 + ORR1A0 LTR MaLR 1 346 0 6 1538 776 302 174 31 chrX 124962068 124962444 -41687852 + RMER13B LTR ERVK 168 642 0 6 1538 522 208 171 25 chrX 124962453 124962611 -41687685 + Lx5 LINE L1 6870 7050 0 6 1538 300 309 19 93 chrX 124962628 124962735 -41687561 - RSINE1 SINE B4 -64 101 3 6 1538 1096 243 104 23 chrX 124963493 124963839 -41686457 + ORR1D1 LTR MaLR 1 374 0 6 1538 1121 76 0 6 chrX 124964039 124964197 -41686099 + (TTTC)n Simple_repeat Simple_repeat 3 159 0 6 1538 1094 62 14 7 chrX 124964198 124964343 -41685953 - B1_Mus2 SINE Alu -1 146 1 6 1538 692 274 124 0 chrX 124964367 124964553 -41685743 - B3 SINE B2 -6 210 2 6 1538 240 122 0 0 chrX 124965553 124965594 -41684702 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 7 1538 351 44 0 0 chrX 124965606 124965651 -41684645 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 1538 225 132 0 0 chrX 124965652 124965690 -41684606 + (GGGAGA)n Simple_repeat Simple_repeat 3 40 0 7 1538 2326 69 0 7 chrX 124966151 124966459 -41683837 - L1_Mus2 LINE L1 -4 6562 6257 7 1538 2652 204 141 11 chrX 124966548 124967207 -41683089 - Lx2B LINE L1 -4 6996 6252 7 1538 1322 230 88 36 chrX 124968734 124969063 -41681233 - ORR1D1 LTR MaLR 0 374 29 7 1538 2152 42 0 0 chrX 124969478 124969737 -41680559 + L1Md_T LINE L1 6324 6582 0 7 1538 444 333 137 30 chrX 124970008 124970271 -41680025 + B4A SINE B4 2 292 0 7 1538 21 0 0 0 chrX 124970337 124970358 -41679938 + AT_rich Low_complexity Low_complexity 1 21 0 7 1538 3660 81 93 0 chrX 124970728 124971245 -41679051 + L1_Mus1 LINE L1 6001 6565 -2 7 1538 189 74 0 0 chrX 124971256 124971283 -41679013 + (A)n Simple_repeat Simple_repeat 1 27 0 7 1538 285 222 42 0 chrX 124971334 124971406 -41678890 + L1MA4 LINE L1 5844 5918 -382 7 1538 1857 146 13 0 chrX 124971406 124971708 -41678588 - Lx2 LINE L1 -1 6996 6691 7 1538 4645 108 18 1 chrX 124971708 124972423 -41677873 + MusHAL1 LINE L1 1452 2178 -534 7 1538 2127 129 214 32 chrX 124972423 124972896 -41677400 - RLTR6_Mm LTR ERV1 -59 595 37 7 1538 1698 177 10 0 chrX 124973006 124973317 -41676979 + L1_Mur2 LINE L1 3387 3700 -2177 7 1538 23 33 0 0 chrX 124977039 124977069 -41673227 + AT_rich Low_complexity Low_complexity 1 30 0 7 1538 573 310 107 69 chrX 124977190 124977509 -41672787 + MTEa LTR MaLR 1 331 -48 7 1538 354 314 74 36 chrX 124977672 124977852 -41672444 - MLT1H2 LTR MaLR -261 288 60 7 1538 195 396 10 30 chrX 124978635 124978734 -41671562 - L2b LINE L2 -51 3324 3228 7 1538 1332 87 22 0 chrX 124979685 124979869 -41670427 - B2_Mm2 SINE B2 -7 188 1 7 1538 3018 60 0 0 chrX 124980911 124981294 -41669002 - L1Md_A LINE L1 0 6582 6200 7 1538 274 282 0 0 chrX 124982227 124982298 -41667998 + L1M1 LINE L1 5819 5889 -414 7 1538 308 220 750 3 chrX 124982752 124982840 -41667456 + Lx9 LINE L1 7386 7539 -105 7 1538 1894 221 31 14 chrX 124982840 124983253 -41667043 + MTC LTR MaLR 1 420 -1 7 1538 308 222 0 18 chrX 124983253 124983354 -41666942 + Lx9 LINE L1 7540 7639 -5 7 1538 390 285 51 89 chrX 124984148 124984306 -41665990 + B4 SINE B4 70 221 -71 7 1538 691 234 0 14 chrX 124984168 124984311 -41665985 + B1_Mur2 SINE Alu 9 149 0 7 1538 243 293 146 39 chrX 124984810 124984913 -41665383 - PB1D10 SINE Alu -2 115 2 7 1538 1318 257 18 21 chrX 124985008 124985393 -41664903 - Lx2B LINE L1 -11 6989 6606 7 1538 360 250 0 0 chrX 124985396 124985468 -41664828 + Lx2B LINE L1 6534 6605 -395 7 1538 441 137 135 19 chrX 124985984 124986088 -41664208 + URR1A DNA MER1_type 46 161 -65 7 1538 3109 92 0 5 chrX 124986088 124986515 -41663781 - L1_Mus1 LINE L1 -338 6229 5805 7 1538 2369 70 0 22 chrX 124986515 124986835 -41663461 + L1_Mus1 LINE L1 6254 6566 -1 7 1538 497 188 10 0 chrX 124986851 124986947 -41663349 + URR1A DNA MER1_type 129 225 -1 7 1538 441 12 32 75 chrX 124988572 124988665 -41661631 + (TTTTTG)n Simple_repeat Simple_repeat 2 90 0 7 1538 233 28 83 0 chrX 124991112 124991148 -41659148 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 7 1538 3112 46 18 3 chrX 124991814 124992204 -41658092 + MTA_Mm LTR MaLR 1 396 0 7 1538 217 206 15 31 chrX 124992715 124992743 -41657553 + T-rich Low_complexity Low_complexity 38 65 0 7 1538 255 31 0 0 chrX 124992743 124992775 -41657521 + (TTG)n Simple_repeat Simple_repeat 2 33 0 7 1538 217 206 15 31 chrX 124992775 124992811 -41657485 + T-rich Low_complexity Low_complexity 3 37 0 7 1538 23 0 0 0 chrX 124993262 124993285 -41657011 + AT_rich Low_complexity Low_complexity 1 23 0 7 1538 279 0 0 0 chrX 124993311 124993342 -41656954 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 7 1538 892 149 0 0 chrX 124993342 124993476 -41656820 - B1_Mus1 SINE Alu -12 136 3 7 1538 993 97 20 20 chrX 124994243 124994376 -41655920 + B1_Mm SINE Alu 1 136 -11 7 1538 297 0 0 0 chrX 124994376 124994409 -41655887 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 7 1538 993 97 20 20 chrX 124994409 124994422 -41655874 + B1_Mm SINE Alu 137 147 0 7 1538 553 156 31 20 chrX 124994422 124994509 -41655787 - B1_Mur4 SINE Alu -13 137 48 7 1538 752 221 82 39 chrX 124994865 124995072 -41655224 - B3 SINE B2 0 216 1 7 1538 234 156 0 0 chrX 124995851 124995896 -41654400 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1538 453 229 137 10 chrX 124997102 124997226 -41653070 + B3A SINE B2 1 137 -79 7 1538 392 111 14 0 chrX 124997253 124997325 -41652971 + (CA)n Simple_repeat Simple_repeat 1 73 0 7 1538 25 31 0 0 chrX 124997432 124997464 -41652832 + AT_rich Low_complexity Low_complexity 1 32 0 7 1538 1416 88 52 61 chrX 124997468 124997620 -41652676 - L1_Mus1 LINE L1 -1 6566 6419 7 1538 1080 88 0 20 chrX 124997620 124997771 -41652525 + B1_Mus1 SINE Alu 1 148 0 7 1538 1416 88 52 61 chrX 124997771 124997849 -41652447 - L1_Mus1 LINE L1 -149 6418 6338 7 1538 926 101 54 0 chrX 124997849 124997978 -41652318 - L1_Mus1 LINE L1 -384 6183 6048 7 1538 3614 156 6 20 chrX 124997978 124998620 -41651676 - Lx LINE L1 -40 6614 5982 7 1538 7043 97 6 9 chrX 124998595 124999155 -41651141 + L1_Mus2 LINE L1 5281 5831 -52 7 1538 342 0 0 0 chrX 124999155 124999193 -41651103 + (TA)n Simple_repeat Simple_repeat 2 39 0 7 1538 7043 95 6 2 chrX 124999193 124999923 -41650373 + L1_Mus2 LINE L1 5832 6564 -2 7 1538 556 65 39 0 chrX 124999923 125000000 -41650296 - Lx LINE L1 -657 5997 5918 7 1538 1797 88 15 4 chrX 125000001 125000264 -41650032 - Lx LINE L1 -738 5916 5651 1 1538 191 387 21 25 chrX 125000364 125000502 -41649794 + MIRm SINE MIR 12 159 -117 2 1538 405 129 0 0 chrX 125000531 125000601 -41649695 + (TG)n Simple_repeat Simple_repeat 2 71 0 3 1538 283 313 64 98 chrX 125001227 125001461 -41648835 + MIRc SINE MIR 9 234 -34 4 1538 22 0 0 0 chrX 125001483 125001505 -41648791 + AT_rich Low_complexity Low_complexity 1 22 0 5 1538 528 290 142 42 chrX 125001602 125001844 -41648452 - Lx8 LINE L1 -925 6771 6513 6 1538 480 299 7 28 chrX 125001915 125002056 -41648240 - Lx8 LINE L1 -1081 6392 6255 6 1538 606 377 60 13 chrX 125002097 125002481 -41647815 + Lx8 LINE L1 6785 7186 -287 7 1538 538 268 67 15 chrX 125002492 125002844 -41647452 - MTD LTR MaLR -14 405 3 8 1538 577 224 73 26 chrX 125002975 125003126 -41647170 - Lx4B LINE L1 -4 7054 6897 9 1538 536 298 80 93 chrX 125003126 125003588 -41646708 + RLTR12A LTR ERVK 50 505 -63 1 1538 325 358 34 7 chrX 125003665 125003814 -41646482 + Lx8 LINE L1 7241 7393 -80 7 1538 294 360 68 56 chrX 125004038 125004200 -41646096 + RSINE1 SINE B4 2 165 0 1 1538 21 71 0 0 chrX 125004309 125004351 -41645945 + AT_rich Low_complexity Low_complexity 1 42 0 1 1538 21 57 0 0 chrX 125005085 125005120 -41645176 + AT_rich Low_complexity Low_complexity 1 35 0 1 1538 721 269 58 55 chrX 125005546 125005892 -41644404 + RLTR10D LTR ERVK 1 347 -12 1 1538 1884 79 0 22 chrX 125005912 125006184 -41644112 + L1Md_F2 LINE L1 6304 6569 -13 1 1538 34 0 0 0 chrX 125006768 125006802 -41643494 + AT_rich Low_complexity Low_complexity 1 34 0 1 1538 3397 100 6 10 chrX 125006805 125007302 -41642994 - L1_Mus3 LINE L1 -5 6633 6139 1 1538 1118 121 0 0 chrX 125007302 125007468 -41642828 - L1_Mus3 LINE L1 -644 5994 5829 1 1538 2935 171 2 31 chrX 125007470 125008043 -41642253 - L1_Mus3 LINE L1 -312 5571 5016 1 1538 20712 81 5 13 chrX 125008039 125009735 -41640561 - L1Md_F2 LINE L1 -14 6568 4878 1 1538 8313 35 0 0 chrX 125009735 125010714 -41639582 + L1Md_T LINE L1 5600 6578 -4 1 1538 20712 86 3 20 chrX 125010714 125011186 -41639110 - L1Md_F2 LINE L1 -1006 4877 4437 1 1538 1568 36 0 10 chrX 125011186 125011380 -41638916 - B2_Mm1t SINE B2 0 193 2 2 1538 20712 86 3 20 chrX 125011380 125012884 -41637412 - L1Md_F2 LINE L1 -1447 4436 2947 1 1538 3246 102 4 15 chrX 125013152 125013631 -41636665 - L1_Mus3 LINE L1 -8 6630 6157 2 1538 234 263 133 15 chrX 125013702 125013837 -41636459 - L1M2 LINE L1 -2459 3684 3534 2 1538 272 244 39 16 chrX 125013836 125013965 -41636331 - L1M4 LINE L1 -2644 3502 3371 2 1538 295 268 23 11 chrX 125014679 125014766 -41635530 + HERVL74-int LTR ERVL 2894 2981 -2704 2 1538 337 336 35 115 chrX 125014769 125015169 -41635127 + MLT1B LTR MaLR 11 378 -12 2 1538 266 50 25 0 chrX 125015215 125015255 -41635041 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 2 1538 308 159 14 14 chrX 125015596 125015666 -41634630 + L1_Rod LINE L1 3306 3375 -2472 2 1538 609 213 12 35 chrX 125015697 125015867 -41634429 + L1_Rod LINE L1 4700 4865 -982 2 1538 8801 120 18 14 chrX 125015864 125017393 -41632903 + Lx3A LINE L1 5451 6980 -1 2 1538 23 0 0 0 chrX 125017394 125017417 -41632879 + AT_rich Low_complexity Low_complexity 1 23 0 2 1538 234 274 14 14 chrX 125017417 125017491 -41632805 + L1_Rod LINE L1 4882 4955 -892 2 1538 735 310 197 29 chrX 125017561 125018196 -41632100 + Lx9 LINE L1 6730 7471 -173 3 1538 453 50 0 0 chrX 125018200 125018260 -41632036 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1538 1045 118 12 6 chrX 125018296 125018458 -41631838 + B2_Mm2 SINE B2 13 175 -20 3 1538 41 58 0 0 chrX 125018458 125018527 -41631769 + AT_rich Low_complexity Low_complexity 1 69 0 3 1538 7888 43 1 21 chrX 125018599 125019592 -41630704 - L1Md_F2 LINE L1 -1 6581 5609 3 1538 3489 36 0 0 chrX 125019590 125020007 -41630289 + L1_Mm LINE L1 4707 5123 -760 3 1538 237 321 17 86 chrX 125020070 125020186 -41630110 + B1_Mur3 SINE Alu 1 108 -41 3 1538 364 349 89 0 chrX 125020264 125020410 -41629886 + RSINE1 SINE B4 3 161 -4 3 1538 2427 71 12 3 chrX 125021480 125021805 -41628491 + L1Md_F2 LINE L1 5259 5586 -297 3 1538 7206 61 48 0 chrX 125021805 125022751 -41627545 + L1Md_F2 LINE L1 5587 6577 -5 3 1538 1135 249 40 16 chrX 125022751 125022812 -41627484 + L1M1 LINE L1 5616 5683 -617 3 1538 476 94 1 0 chrX 125022826 125022892 -41627404 + L1_Mm LINE L1 5521 5615 -553 4 1538 7433 69 17 1 chrX 125022892 125023867 -41626429 + L1Md_F2 LINE L1 5587 6577 -5 4 1538 280 237 64 19 chrX 125023867 125023928 -41626368 + L1_Mm LINE L1 5616 5683 -608 4 1538 511 77 0 0 chrX 125023942 125024007 -41626289 + L1Md_F2 LINE L1 5521 5585 -298 4 1538 6906 89 13 6 chrX 125024008 125024982 -41625314 + L1Md_F2 LINE L1 5587 6567 -15 4 1538 468 51 0 0 chrX 125025301 125025360 -41624936 + (TG)n Simple_repeat Simple_repeat 1 59 0 4 1538 290 325 145 17 chrX 125025428 125025669 -41624627 - B4A SINE B4 -17 275 4 4 1538 27 73 0 0 chrX 125025935 125025990 -41624306 + AT_rich Low_complexity Low_complexity 1 55 0 4 1538 28520 139 21 33 chrX 125026077 125030524 -41619772 + L1_Mus2 LINE L1 238 4596 -1287 4 1538 3495 52 5 5 chrX 125030524 125030969 -41619327 + L1Md_F2 LINE L1 6125 6569 -13 4 1538 28520 123 18 12 chrX 125030969 125031131 -41619165 + L1_Mus2 LINE L1 4597 4732 -1151 4 1538 252 77 0 0 chrX 125031131 125031170 -41619126 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1538 28520 99 37 33 chrX 125031170 125033011 -41617285 + L1_Mus2 LINE L1 4733 6565 -1 4 1538 1677 188 37 7 chrX 125034473 125034773 -41615523 - MTC LTR MaLR -8 413 105 4 1538 23 54 0 0 chrX 125035871 125035908 -41614388 + AT_rich Low_complexity Low_complexity 1 37 0 5 1538 919 151 0 11 chrX 125036017 125036191 -41614105 + Lx LINE L1 6480 6651 -3 5 1538 183 374 106 42 chrX 125037010 125037247 -41613049 - L2 LINE L2 -366 3053 2802 5 1538 710 124 8 0 chrX 125037700 125037821 -41612475 + (GA)n Simple_repeat Simple_repeat 1 122 0 5 1538 1166 296 10 56 chrX 125038103 125038480 -41611816 + Lx8 LINE L1 5420 5794 -86 5 1538 488 236 227 11 chrX 125038480 125038656 -41611640 + B3 SINE B2 3 216 0 5 1538 1166 296 10 56 chrX 125038656 125038758 -41611538 + Lx8 LINE L1 5795 5877 -3 5 1538 22 0 0 0 chrX 125038788 125038810 -41611486 + AT_rich Low_complexity Low_complexity 1 22 0 5 1538 8400 35 0 0 chrX 125038831 125039893 -41610403 - L1Md_T LINE L1 -2 6580 5519 5 192 28476 33 9 1 chrX 125039891 125043987 -41606309 - L1Md_T LINE L1 -1156 4727 407 5 1539 1896 315 79 23 chrX 125044134 125045180 -41605116 + Lx8 LINE L1 6063 7193 -503 5 1539 201 171 0 0 chrX 125045352 125045387 -41604909 + T-rich Low_complexity Low_complexity 1 35 0 5 1539 1662 132 11 0 chrX 125045399 125045665 -41604631 - L1_Mus3 LINE L1 -6 6632 6364 5 1539 2115 153 8 16 chrX 125045665 125046044 -41604252 + L1_Mm LINE L1 4931 5306 -577 6 1539 956 55 0 0 chrX 125046039 125046166 -41604130 + L1Md_F3 LINE L1 4343 4469 -1414 6 1539 2288 40 0 0 chrX 125046172 125046445 -41603851 - RLTR10-int LTR ERVK -1063 924 652 6 1539 321 111 0 0 chrX 125046448 125046493 -41603803 - RLTR10-int LTR ERVK -6405 137 93 6 1539 518 222 11 17 chrX 125046493 125046672 -41603624 + T-rich Low_complexity Low_complexity 2 179 0 6 1539 1224 107 6 6 chrX 125046722 125046900 -41603396 - RLTR10-int LTR ERVK -7403 178 1 6 1539 2508 88 0 139 chrX 125046900 125047324 -41602972 - RLTR10B2 LTR ERVK 0 365 1 6 1539 9623 24 0 1 chrX 125047324 125048448 -41601848 + L1Md_F3 LINE L1 4464 5586 -297 6 1539 8132 41 5 1 chrX 125048449 125049441 -41600855 + L1Md_F3 LINE L1 5588 6583 -1 6 1539 1001 125 1 18 chrX 125049453 125049642 -41600654 + L1_Mm LINE L1 5262 5453 -430 6 1539 21 0 0 0 chrX 125049642 125049663 -41600633 + AT_rich Low_complexity Low_complexity 1 21 0 6 1539 238 232 18 0 chrX 125050135 125050191 -41600105 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 6 1539 777 98 0 0 chrX 125051272 125051384 -41598912 + (GGAA)n Simple_repeat Simple_repeat 2 113 0 6 1539 201 196 0 0 chrX 125053285 125053331 -41596965 + GA-rich Low_complexity Low_complexity 2 47 0 6 1539 616 259 22 0 chrX 125053774 125053913 -41596383 + B1_Mur1 SINE Alu 3 144 -5 6 1539 2618 122 57 18 chrX 125054007 125054449 -41595847 - Lx LINE L1 0 6654 6196 7 1539 255 284 111 34 chrX 125054945 125055098 -41595198 + MIR SINE MIR 91 255 -7 7 1539 620 273 29 29 chrX 125055285 125055455 -41594841 - MER20 DNA MER1_type -25 194 25 7 1539 838 158 0 12 chrX 125056003 125056169 -41594127 + CT-rich Low_complexity Low_complexity 3 166 0 7 1539 451 351 48 0 chrX 125056174 125056362 -41593934 - B3 SINE B2 -15 201 5 7 1539 4181 27 12 0 chrX 125057111 125057597 -41592699 - MT2_Mm LTR ERVL 0 493 2 7 1539 2674 59 24 0 chrX 125057646 125057984 -41592312 - ORR1A1 LTR MaLR 0 346 1 7 1539 3387 91 0 0 chrX 125058415 125058987 -41591309 - L1_Mus1 LINE L1 -584 5983 5412 7 1539 4236 82 0 0 chrX 125058988 125059540 -41590756 + L1_Mus1 LINE L1 6011 6562 -5 7 1539 431 143 71 0 chrX 125060341 125060411 -41589885 - B1_Mur2 SINE Alu -7 142 68 7 1539 196 324 56 14 chrX 125060484 125060556 -41589740 - L2c LINE L2 -227 3160 3086 7 1539 363 284 89 17 chrX 125060900 125061136 -41589160 - L1ME2 LINE L1 -111 6053 5801 8 1539 221 359 21 11 chrX 125061321 125061375 -41588921 - L2c LINE L2 -844 2575 2520 7 1539 691 280 108 106 chrX 125061375 125061791 -41588505 + MTC LTR MaLR 1 417 -4 8 1539 221 359 21 11 chrX 125061791 125061829 -41588467 - L2c LINE L2 -900 2519 2483 7 1539 21 0 0 0 chrX 125062517 125062538 -41587758 + AT_rich Low_complexity Low_complexity 1 21 0 8 1539 261 0 0 0 chrX 125063918 125063947 -41586349 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 1539 4113 108 56 37 chrX 125063947 125064675 -41585621 - RMER17A LTR ERVK -3 748 7 8 1539 381 22 0 0 chrX 125064677 125064723 -41585573 + (CA)n Simple_repeat Simple_repeat 1 46 0 8 1539 754 111 0 0 chrX 125065771 125065879 -41584417 - L1_Mus2 LINE L1 -461 6105 5998 8 1539 7411 67 6 6 chrX 125065882 125067099 -41583197 - L1Md_F2 LINE L1 0 6582 5367 8 1539 3285 57 7 2 chrX 125067094 125067516 -41582780 - L1_Mus2 LINE L1 -556 6010 5587 8 1539 3077 87 32 5 chrX 125067530 125067970 -41582326 + L1_Mus2 LINE L1 6115 6566 0 8 1539 232 209 75 0 chrX 125068162 125068229 -41582067 + GA-rich Low_complexity Low_complexity 1 72 0 8 1539 226 284 32 128 chrX 125068870 125068942 -41581354 + B4 SINE B4 26 85 -207 9 1539 283 321 54 157 chrX 125068942 125069028 -41581268 + B1F2 SINE Alu 1 80 -69 9 1539 1097 72 0 0 chrX 125069028 125069166 -41581130 + B1_Mm SINE Alu 1 138 -9 9 1539 283 321 54 157 chrX 125069166 125069245 -41581051 + B1F2 SINE Alu 81 149 0 9 1539 306 0 0 0 chrX 125069254 125069288 -41581008 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 9 1539 25 31 0 0 chrX 125069418 125069450 -41580846 + AT_rich Low_complexity Low_complexity 1 32 0 9 1539 276 312 47 26 chrX 125069568 125069759 -41580537 + L1MEd LINE L1 1024 1218 -4918 9 1539 275 318 77 18 chrX 125069843 125070064 -41580232 + L1MEd LINE L1 1349 1582 -4584 9 1539 1088 82 7 0 chrX 125070362 125070508 -41579788 + B1_Mus1 SINE Alu 1 147 -1 9 1539 28744 110 14 6 chrX 125070515 125076030 -41574266 + Lx3_Mus LINE L1 1456 7008 -1 9 1539 15772 177 54 13 chrX 125076059 125079693 -41570603 + Lx5 LINE L1 2453 6246 -804 9 1539 2073 208 64 26 chrX 125079696 125080164 -41570132 + Lx5 LINE L1 6562 7047 -11 9 1539 314 217 131 85 chrX 125080174 125080350 -41569946 + L1MEd LINE L1 2283 2466 -3680 9 1539 584 52 13 0 chrX 125080544 125080621 -41569675 + MERVL-int LTR ERVL 5283 5360 -125 9 1539 385 167 46 35 chrX 125080621 125080708 -41569588 + ORR1A3-int LTR MaLR 553 640 -1323 1 1539 314 0 0 0 chrX 125080708 125080746 -41569550 + MERVL-int LTR ERVL 5448 5485 0 9 1539 2398 115 56 135 chrX 125080746 125081421 -41568875 + MT2_Mm LTR ERVL 1 584 0 9 1539 4322 82 18 2 chrX 125081619 125082219 -41568077 - L1_Mm LINE L1 -750 5133 4524 1 1539 4447 12 0 0 chrX 125082220 125082713 -41567583 - MT2_Mm LTR ERVL 0 493 1 1 1539 314 0 0 0 chrX 125082713 125082751 -41567545 - MERVL-int LTR ERVL 0 5485 5448 1 1539 402 211 10 31 chrX 125082751 125082849 -41567447 - ORR1A3-int LTR MaLR -1323 640 545 1 1539 6307 22 0 0 chrX 125083259 125083977 -41566319 - MERVL-int LTR ERVL -1335 4150 3433 1 1539 3262 31 5 30 chrX 125083977 125084408 -41565888 - MT-int LTR MaLR -609 489 70 1 1539 6152 27 1 0 chrX 125084433 125085147 -41565149 + MERVL-int LTR ERVL 4657 5371 -114 1 1539 400 123 13 40 chrX 125085147 125085223 -41565073 + ORR1A3-int LTR MaLR 567 640 -1323 1 1539 314 0 0 0 chrX 125085223 125085261 -41565035 + MERVL-int LTR ERVL 5448 5485 0 1 1539 2313 28 3 7 chrX 125085261 125085549 -41564747 + MT2_Mm LTR ERVL 1 287 -206 1 1539 1908 60 0 26 chrX 125086112 125086385 -41563911 + L1_Mm LINE L1 1277 1542 -4341 1 1539 1449 161 11 38 chrX 125086417 125086682 -41563614 - RLTR14 LTR ERV1 0 382 125 1 1539 2402 11 4 0 chrX 125086708 125086989 -41563307 - MT2_Mm LTR ERVL -211 282 1 1 1539 314 0 0 0 chrX 125086989 125087027 -41563269 - MERVL-int LTR ERVL 0 5485 5448 1 1539 392 167 46 35 chrX 125087027 125087114 -41563182 - ORR1A3-int LTR MaLR -1323 640 553 1 1539 1054 38 8 0 chrX 125087114 125087246 -41563050 - MERVL-int LTR ERVL -125 5360 5228 1 1539 1112 30 0 0 chrX 125087251 125087384 -41562912 + MT2_Mm LTR ERVL 361 493 0 1 1539 17239 11 1 0 chrX 125087384 125089315 -41560981 + MERVL-int LTR ERVL 1 1933 -3552 1 1539 373 255 64 129 chrX 125089322 125089372 -41560924 + MT2B LTR ERVL 117 155 -446 1 1539 637 208 13 81 chrX 125089372 125089531 -41560765 + B1_Mur3 SINE Alu 3 149 0 1 1539 22 99 0 0 chrX 125089724 125089795 -41560501 + AT_rich Low_complexity Low_complexity 1 71 0 1 1539 381 340 76 13 chrX 125089885 125090043 -41560253 + MLT1H1 LTR MaLR 23 190 -365 1 1539 25 0 0 0 chrX 125090816 125090841 -41559455 + AT_rich Low_complexity Low_complexity 1 25 0 1 1539 326 325 8 0 chrX 125091129 125091246 -41559050 + L1M5 LINE L1 4496 4613 -1533 1 1539 3159 265 86 18 chrX 125091432 125092426 -41557870 + Lx9 LINE L1 6358 7418 -226 1 1539 234 243 34 54 chrX 125092451 125092599 -41557697 + Lx9 LINE L1 7499 7643 -1 1 1539 11007 121 36 61 chrX 125092600 125093727 -41556569 + L1_Mus2 LINE L1 3879 4999 -884 1 1539 979 104 14 20 chrX 125093727 125093874 -41556422 + B1_Mus2 SINE Alu 2 147 0 1 1539 11007 121 36 61 chrX 125093874 125094698 -41555598 + L1_Mus2 LINE L1 5000 5782 -101 1 1539 5319 37 22 0 chrX 125094698 125095346 -41554950 + L1Md_F2 LINE L1 5909 6570 -12 1 1539 5868 76 4 3 chrX 125095344 125096127 -41554169 + L1_Mus2 LINE L1 5783 6566 0 1 1539 29 28 0 0 chrX 125096142 125096178 -41554118 + AT_rich Low_complexity Low_complexity 1 36 0 1 1539 2814 306 92 20 chrX 125096273 125096345 -41553951 + Lx8 LINE L1 6185 6259 -1214 1 1539 306 0 0 0 chrX 125096345 125096379 -41553917 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1539 2814 306 92 20 chrX 125096379 125097479 -41552817 + Lx8 LINE L1 6260 7441 -32 1 1539 23 33 0 0 chrX 125097493 125097523 -41552773 + AT_rich Low_complexity Low_complexity 1 30 0 1 1539 316 293 90 36 chrX 125097574 125097797 -41552499 - L1M1 LINE L1 -544 5756 5522 1 1539 25 90 0 0 chrX 125097829 125097896 -41552400 + AT_rich Low_complexity Low_complexity 1 67 0 1 1539 328 269 53 2 chrX 125097916 125098020 -41552276 - L1M5 LINE L1 -977 5467 5361 1 1539 492 132 0 0 chrX 125098024 125098107 -41552189 + (T)n Simple_repeat Simple_repeat 1 83 0 1 1539 448 318 48 0 chrX 125098107 125098233 -41552063 - B1F SINE Alu 0 149 18 1 1539 405 306 8 40 chrX 125098377 125098503 -41551793 + ID_B1 SINE B4 2 123 -101 1 1539 397 324 43 27 chrX 125098552 125098736 -41551560 + L1ME3B LINE L1 5877 6063 -177 1 1539 520 281 59 26 chrX 125099794 125099991 -41550305 + B3A SINE B2 15 205 -11 1 1539 6939 104 47 4 chrX 125100273 125101997 -41548299 - L1_Mus3 LINE L1 0 6638 4839 1 1539 375 315 0 0 chrX 125102237 125102329 -41547967 + B1_Mur2 SINE Alu 6 97 -52 1 1539 209 30 61 0 chrX 125102331 125102364 -41547932 + (TAAAAA)n Simple_repeat Simple_repeat 4 38 0 1 1539 24 32 0 0 chrX 125102567 125102598 -41547698 + AT_rich Low_complexity Low_complexity 1 31 0 1 1539 226 232 54 0 chrX 125103610 125103666 -41546630 + L1MC LINE L1 5600 5658 -2224 1 1539 486 0 0 0 chrX 125103725 125103779 -41546517 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 1 1539 813 97 81 0 chrX 125103784 125103908 -41546388 - B2_Mm2 SINE B2 -61 134 1 1 1539 752 307 12 68 chrX 125104785 125105033 -41545263 - B4A SINE B4 0 292 59 1 1539 351 0 0 0 chrX 125105037 125105076 -41545220 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 1539 214 179 0 0 chrX 125105750 125105789 -41544507 + A-rich Low_complexity Low_complexity 2 40 0 1 1539 836 322 80 19 chrX 125106292 125106653 -41543643 - RMER5 LTR ERV1 0 534 152 1 1539 294 325 0 0 chrX 125106683 125106766 -41543530 + B2_Mm2 SINE B2 2 84 -111 1 1539 215 143 41 0 chrX 125106767 125106816 -41543480 + (TTTG)n Simple_repeat Simple_repeat 3 53 0 1 1539 2087 171 177 2 chrX 125106829 125107269 -41543027 - Lx3C LINE L1 -1 6975 6459 1 1539 1247 179 21 0 chrX 125107269 125107509 -41542787 + RMER10B LTR ERVL 22 266 -132 1 1539 966 235 0 5 chrX 125107500 125107697 -41542599 + RMER10B LTR ERVL 196 391 -7 1 1539 321 203 0 0 chrX 125107744 125107808 -41542488 + MYSERV6-int LTR ERVK 8719 8782 -177 1 1539 442 207 64 122 chrX 125107811 125108015 -41542281 + RMER17C-int LTR ERVK 2609 2800 -438 1 1539 521 242 31 31 chrX 125108311 125108439 -41541857 + B3 SINE B2 89 216 0 1 1539 299 268 70 26 chrX 125108410 125108525 -41541771 - RMER5 LTR ERV1 -361 173 54 1 1539 391 274 78 166 chrX 125108770 125109041 -41541255 + MLT1A LTR MaLR 63 309 -65 1 1539 465 19 0 0 chrX 125109041 125109095 -41541201 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 1539 574 264 77 36 chrX 125110055 125110275 -41540021 + L1MC1 LINE L1 6081 6309 -24 1 1539 432 0 0 0 chrX 125112561 125112609 -41537687 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1539 279 0 0 0 chrX 125112671 125112702 -41537594 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1539 265 284 11 33 chrX 125113478 125113569 -41536727 + ERVL-int LTR ERVL 711 799 -4958 1 1539 186 306 58 12 chrX 125114034 125114120 -41536176 - L3 LINE CR1 -2308 2181 2092 1 1539 755 75 9 0 chrX 125114936 125115043 -41535253 + (TTTTC)n Simple_repeat Simple_repeat 2 109 0 1 1539 1015 46 0 0 chrX 125115043 125115173 -41535123 - B1_Mus1 SINE Alu -12 136 7 1 1539 259 233 0 17 chrX 125115071 125115189 -41535107 - ORR1B1-int LTR MaLR -755 754 639 1 1539 1679 181 120 0 chrX 125116272 125116614 -41533682 + ORR1C2 LTR MaLR 1 383 -1 1 1539 653 210 36 14 chrX 125116653 125116793 -41533503 - B1_Mur2 SINE Alu -2 147 5 1 1539 3819 207 52 35 chrX 125117010 125117897 -41532399 + RMER13B LTR ERVK 5 906 -2 1 1539 807 165 181 26 chrX 125117979 125118172 -41532124 + URR1A DNA MER1_type 4 226 0 1 1539 33 43 0 0 chrX 125118432 125118479 -41531817 + AT_rich Low_complexity Low_complexity 1 47 0 1 1539 386 346 15 15 chrX 125118505 125118637 -41531659 - RSINE1 SINE B4 -31 134 3 1 1539 5728 138 53 9 chrX 125118763 125119651 -41530645 + Lx3B LINE L1 5941 6848 -125 1 1539 447 35 0 0 chrX 125119651 125119708 -41530588 + (GTGTG)n Simple_repeat Simple_repeat 5 61 0 1 1539 5728 138 53 9 chrX 125119708 125119805 -41530491 + Lx3B LINE L1 6849 6967 -6 1 1539 441 169 0 0 chrX 125119832 125119915 -41530381 + A-rich Low_complexity Low_complexity 1 83 0 1 1539 24 0 0 0 chrX 125119946 125119970 -41530326 + AT_rich Low_complexity Low_complexity 1 24 0 1 1539 204 245 0 0 chrX 125122968 125123017 -41527279 + T-rich Low_complexity Low_complexity 1 49 0 1 1539 2994 248 36 45 chrX 125123255 125124027 -41526269 - RMER1C Other Other 0 1342 578 1 1539 736 241 29 12 chrX 125124030 125124202 -41526094 + B3 SINE B2 33 207 -9 1 1539 225 108 0 0 chrX 125124202 125124239 -41526057 + (CATA)n Simple_repeat Simple_repeat 3 39 0 1 1539 564 15 0 0 chrX 125124638 125124703 -41525593 + (TTTTA)n Simple_repeat Simple_repeat 5 69 0 1 1539 654 270 47 5 chrX 125124703 125124893 -41525403 - B3 SINE B2 -18 198 1 1 1539 1157 94 29 6 chrX 125125012 125125183 -41525113 + B2_Mm2 SINE B2 1 175 -20 1 1539 24 32 0 0 chrX 125125310 125125341 -41524955 + AT_rich Low_complexity Low_complexity 1 31 0 1 1539 1287 219 62 24 chrX 125125426 125125762 -41524534 + MLT2C1 LTR ERVL 1 349 -48 1 1539 261 0 0 0 chrX 125125850 125125879 -41524417 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1539 594 60 0 0 chrX 125126149 125126232 -41524064 + (GA)n Simple_repeat Simple_repeat 1 83 0 1 1539 231 257 229 0 chrX 125126240 125126310 -41523986 + 4.5SRNA scRNA scRNA 5 90 -4 1 1539 401 320 55 16 chrX 125126313 125126440 -41523856 + B1_Mur1 SINE Alu 6 137 -12 1 1539 594 0 0 0 chrX 125126440 125126506 -41523790 + (GGAA)n Simple_repeat Simple_repeat 4 69 0 1 1539 3281 103 11 0 chrX 125127069 125127536 -41522760 + L1_Mus1 LINE L1 6095 6566 -1 1 1539 14691 78 59 2 chrX 125127583 125130406 -41519890 - L1Md_F2 LINE L1 -1 6581 3572 1 1539 422 89 0 0 chrX 125130421 125130500 -41519796 - L1Md_F2 LINE L1 -4397 1486 1408 1 1539 37910 30 0 0 chrX 125130500 125136936 -41513360 - L1Md_T LINE L1 0 6585 107 1 1539 16601 106 11 11 chrX 125136933 125140078 -41510218 - L1Md_A LINE L1 -2311 3572 217 1 1539 1329 56 0 6 chrX 125140107 125140287 -41510009 + L1Md_F2 LINE L1 6400 6578 -4 1 1539 36 0 0 0 chrX 125140287 125140323 -41509973 + AT_rich Low_complexity Low_complexity 1 36 0 1 1539 29 28 0 0 chrX 125140454 125140490 -41509806 + AT_rich Low_complexity Low_complexity 1 36 0 1 1539 2884 53 3 6 chrX 125140583 125140941 -41509355 - IAPEY2_LTR LTR ERVK 0 357 1 1 1539 3403 123 14 28 chrX 125140941 125141674 -41508622 - IAPEY3-int LTR ERVK 0 7581 6907 1 1539 453 68 0 0 chrX 125141674 125141733 -41508563 - IAPEY3-int LTR ERVK -2770 4910 4852 1 1539 3494 70 7 0 chrX 125141726 125142171 -41508125 - IAPEY3-int LTR ERVK -4991 2689 2242 1 1539 3029 102 12 0 chrX 125142151 125142573 -41507723 - IAPEY3-int LTR ERVK -5698 1982 1556 1 1539 3450 185 6 16 chrX 125142546 125143190 -41507106 - IAPLTR4_I LTR ERVK -287 1183 546 1 1539 580 130 0 42 chrX 125143189 125143285 -41507011 - IAPLTR4_I LTR ERVK -1290 180 89 1 1539 938 271 102 12 chrX 125143288 125143542 -41506754 + ORR1D2 LTR MaLR 13 289 -81 1 1539 1089 210 40 88 chrX 125143536 125143833 -41506463 - RMER5 LTR ERV1 -239 295 13 1 1539 30762 95 8 11 chrX 125144327 125149546 -41500750 + L1Md_F2 LINE L1 380 5586 -297 1 1539 6998 93 1 2 chrX 125149546 125150531 -41499765 + L1Md_F2 LINE L1 5587 6570 -12 1 1539 221 354 10 0 chrX 125150735 125150831 -41499465 + MIRc SINE MIR 168 264 -4 1 1539 21 0 0 0 chrX 125151491 125151512 -41498784 + AT_rich Low_complexity Low_complexity 1 21 0 2 1539 4556 159 18 17 chrX 125151741 125152634 -41497662 + L1_Mur2 LINE L1 4523 5416 -461 2 1539 2886 56 61 3 chrX 125152635 125153010 -41497286 - L1Md_F LINE L1 -5624 895 499 2 1539 5550 101 5 2 chrX 125153000 125153826 -41496470 + L1Md_F2 LINE L1 2661 3488 -2395 2 1539 4161 62 0 0 chrX 125153828 125154359 -41495937 + L1Md_F2 LINE L1 5055 5585 -298 2 1539 7038 48 84 3 chrX 125154360 125155279 -41495017 + L1Md_F2 LINE L1 5587 6579 -3 2 1539 1254 157 18 22 chrX 125155300 125155522 -41494774 + L1_Mur2 LINE L1 5416 5636 -250 2 1539 541 255 86 20 chrX 125155521 125155762 -41494534 + Lx7 LINE L1 5368 5657 -643 2 1539 2127 258 89 78 chrX 125155769 125156530 -41493766 - RMER13A LTR ERVK -8 852 83 2 1539 369 322 138 54 chrX 125156422 125156662 -41493634 + RMER13A LTR ERVK 396 655 -205 2 1539 259 204 90 122 chrX 125156606 125156762 -41493534 - RMER13A LTR ERVK -709 151 1 2 1539 283 241 19 13 chrX 125156762 125156847 -41493449 + L1M4 LINE L1 5695 5779 -405 2 1539 522 0 0 0 chrX 125156847 125156905 -41493391 + (TA)n Simple_repeat Simple_repeat 1 58 0 2 1539 263 246 120 23 chrX 125156905 125156952 -41493344 + L1M4 LINE L1 5780 5839 -345 2 1539 294 29 0 0 chrX 125156960 125156995 -41493301 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1539 934 144 13 0 chrX 125157488 125157641 -41492655 + URR1B DNA MER1_type 70 224 -1 2 1539 183 280 20 0 chrX 125158751 125158801 -41491495 - MER5A DNA MER1_type 0 189 139 2 1539 926 279 0 16 chrX 125159053 125159239 -41491057 + B3 SINE B2 3 185 -31 2 1539 235 278 98 49 chrX 125159704 125159806 -41490490 - PB1D7 SINE Alu -9 111 5 2 1539 670 245 0 0 chrX 125159842 125159985 -41490311 + B1_Mus2 SINE Alu 5 147 0 2 1539 387 247 0 12 chrX 125160009 125160095 -41490201 + ID_B1 SINE B4 138 222 -2 2 1539 33 25 0 0 chrX 125160669 125160709 -41489587 + AT_rich Low_complexity Low_complexity 1 40 0 2 1539 564 15 0 0 chrX 125161056 125161121 -41489175 + (TTTTA)n Simple_repeat Simple_repeat 5 69 0 2 1539 2567 123 2 67 chrX 125161126 125161586 -41488710 + RLTR23 LTR ERV1 1 430 0 2 1539 701 339 6 0 chrX 125161595 125161769 -41488527 - B3 SINE B2 -41 175 1 2 1539 1258 312 161 17 chrX 125162225 125163624 -41486672 - L1M2 LINE L1 -1188 4955 3356 2 1539 410 336 0 8 chrX 125164058 125164175 -41486121 - MTEa LTR MaLR -263 116 1 2 1539 264 256 122 0 chrX 125164185 125164267 -41486029 + ORR1D2 LTR MaLR 5 96 -274 2 1539 589 301 54 6 chrX 125164289 125164456 -41485840 + ORR1D2 LTR MaLR 187 361 -9 2 1539 3615 107 0 15 chrX 125164842 125165372 -41484924 + Lx3_Mus LINE L1 5336 5857 -29 2 1539 4081 140 97 0 chrX 125165372 125166084 -41484212 + RMER17B LTR ERVK 1 781 -177 2 1539 1800 113 107 27 chrX 125166088 125166424 -41483872 + Lx3_Mus LINE L1 5849 6211 -798 2 1539 3822 68 0 0 chrX 125166424 125166906 -41483390 + L1_Mus1 LINE L1 6085 6566 -1 2 1539 35 0 0 0 chrX 125167384 125167419 -41482877 + AT_rich Low_complexity Low_complexity 1 35 0 2 1539 281 324 57 9 chrX 125168562 125168668 -41481628 + B1F1 SINE Alu 6 116 -33 2 1539 1094 35 14 0 chrX 125168717 125168859 -41481437 + (GGGAA)n Simple_repeat Simple_repeat 3 146 0 2 1539 21 0 0 0 chrX 125169019 125169040 -41481256 + AT_rich Low_complexity Low_complexity 1 21 0 2 1539 366 80 0 0 chrX 125169040 125169090 -41481206 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 2 1539 200 333 158 0 chrX 125170071 125170191 -41480105 + L2 LINE L2 1155 1293 -2126 2 1539 454 356 111 39 chrX 125170687 125171102 -41479194 + L2 LINE L2 2407 2851 -568 2 1539 261 312 34 34 chrX 125171933 125172079 -41478217 + L1MEc LINE L1 96 241 -6159 2 1539 305 326 52 52 chrX 125172277 125172413 -41477883 - ORR1E LTR MaLR -223 136 1 2 1539 255 273 72 72 chrX 125172413 125172484 -41477812 + MLT1F-int LTR MaLR 547 617 -872 2 1539 1005 338 72 32 chrX 125172562 125173091 -41477205 + Lx9 LINE L1 6923 7472 -172 2 1539 1195 292 24 37 chrX 125173108 125173488 -41476808 - Lx9 LINE L1 -772 6872 6498 2 1539 378 0 0 0 chrX 125173503 125173545 -41476751 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 192 2819 304 27 36 chrX 125173548 125173940 -41476356 + Lx8 LINE L1 6422 6812 -661 2 1540 4092 133 63 42 chrX 125173940 125174732 -41475564 - RMER17D2 LTR ERVK 0 809 1 2 1540 2819 304 27 36 chrX 125174732 125175389 -41474907 + Lx8 LINE L1 6813 7461 -12 2 1540 357 237 163 51 chrX 125175398 125175594 -41474702 + L1MEc LINE L1 1673 1890 -4510 2 1540 889 311 56 6 chrX 125175699 125176019 -41474277 - ORR1D2 LTR MaLR -9 350 8 2 1540 426 20 0 0 chrX 125176197 125176248 -41474048 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1540 2955 82 5 2 chrX 125176295 125176698 -41473598 - Lx LINE L1 -639 6015 5612 2 1540 250 301 112 17 chrX 125176777 125176956 -41473340 + L1MEc LINE L1 2347 2542 -3777 2 1540 377 363 156 0 chrX 125177054 125177343 -41472953 + L1MEc LINE L1 2658 2991 -3328 2 1540 360 0 0 0 chrX 125177345 125177385 -41472911 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1540 449 357 12 60 chrX 125177605 125177772 -41472524 + RSINE1 SINE B4 6 164 -1 2 1540 229 343 28 9 chrX 125178484 125178593 -41471703 - MIR SINE MIR -65 197 87 2 1540 187 380 0 0 chrX 125179464 125179514 -41470782 - L2c LINE L2 -66 3321 3272 2 1540 512 276 173 26 chrX 125179720 125179991 -41470305 - MLT1C LTR MaLR -151 316 6 2 1540 333 307 18 0 chrX 125180017 125180131 -41470165 - MLT1C-int LTR MaLR -19 1352 1237 2 1540 2205 311 85 32 chrX 125180241 125181168 -41469128 + Lx8 LINE L1 6367 7342 -131 2 1540 430 316 8 71 chrX 125181175 125181301 -41468995 + B1_Mur1 SINE Alu 7 124 -25 2 1540 417 39 0 0 chrX 125181304 125181355 -41468941 + (TC)n Simple_repeat Simple_repeat 1 51 0 2 1540 585 40 0 0 chrX 125181355 125181430 -41468866 + (CA)n Simple_repeat Simple_repeat 1 76 0 2 1540 459 0 0 0 chrX 125181430 125181480 -41468816 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 1540 239 231 65 37 chrX 125181544 125181652 -41468644 + Lx8 LINE L1 7362 7472 -1 2 1540 349 287 39 83 chrX 125182042 125182198 -41468098 + MLT2B4 LTR ERVL 5 153 -403 2 1540 699 310 9 18 chrX 125182354 125182571 -41467725 - B3 SINE B2 0 216 2 2 1540 571 295 45 6 chrX 125183000 125183157 -41467139 + MER5A1 DNA MER1_type 2 164 -2 2 1540 196 387 9 19 chrX 125183228 125183336 -41466960 + MER5A DNA MER1_type 82 188 -1 2 1540 249 135 0 0 chrX 125183456 125183508 -41466788 + (T)n Simple_repeat Simple_repeat 1 52 0 2 1540 297 0 0 0 chrX 125184783 125184816 -41465480 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1540 21 71 0 0 chrX 125185230 125185272 -41465024 + AT_rich Low_complexity Low_complexity 1 42 0 2 1540 8894 65 0 1 chrX 125185687 125186911 -41463385 - L1Md_F2 LINE L1 -628 5954 4732 2 1540 8421 29 1 0 chrX 125186953 125188280 -41462016 - L1Md_A LINE L1 0 6582 5255 2 1540 2408 53 0 0 chrX 125188279 125188582 -41461714 - L1Md_F2 LINE L1 -1137 4746 4444 2 1540 4540 79 12 20 chrX 125188582 125189227 -41461069 + L1Md_F2 LINE L1 5939 6578 -4 2 1540 1315 109 0 5 chrX 125189564 125189748 -41460548 + B2_Mm2 SINE B2 4 186 -9 2 1540 280 348 82 16 chrX 125190921 125191105 -41459191 - MLT1A1 LTR MaLR -206 202 7 2 1540 1052 160 75 0 chrX 125191473 125191673 -41458623 - Lx2 LINE L1 0 6997 6783 2 1540 22629 168 19 29 chrX 125191673 125195200 -41455096 - Lx2 LINE L1 -361 6636 3142 2 1540 1492 43 26 11 chrX 125195200 125195389 -41454907 - B2_Mm1a SINE B2 -1 192 1 2 1540 22629 178 26 36 chrX 125195389 125196421 -41453875 - Lx2 LINE L1 -2745 3141 2111 2 1540 1104 90 0 0 chrX 125196421 125196566 -41453730 + B1_Mus2 SINE Alu 1 145 -2 2 1540 22629 165 25 32 chrX 125196566 125197537 -41452759 - Lx2 LINE L1 -3776 2110 1174 2 1540 2173 62 31 0 chrX 125197537 125197825 -41452471 - L1Md_F2 LINE L1 -13 6569 6273 2 1540 4811 109 24 13 chrX 125197825 125198397 -41451899 - Lx2 LINE L1 -5484 1173 585 2 1540 7121 63 13 9 chrX 125198429 125198972 -41451324 - L1Md_F2 LINE L1 -12 6570 6034 2 1540 2178 126 0 0 chrX 125198972 125199281 -41451015 - RLTR27 LTR ERVK 0 309 1 2 1540 7121 63 13 9 chrX 125199281 125199682 -41450614 - L1Md_F2 LINE L1 -549 6033 5623 2 1540 576 42 0 0 chrX 125200047 125200118 -41450178 + (CA)n Simple_repeat Simple_repeat 2 72 0 2 1540 387 0 0 0 chrX 125200118 125200160 -41450136 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 1540 261 0 0 0 chrX 125200503 125200532 -41449764 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2 1540 318 332 124 40 chrX 125200638 125200936 -41449360 + L1M5 LINE L1 4980 5302 -844 2 1540 1287 107 44 0 chrX 125201043 125201249 -41449047 - L1_Mus3 LINE L1 0 6638 6424 2 1540 312 236 0 36 chrX 125201279 125201422 -41448874 + L1M5 LINE L1 5354 5489 -685 2 1540 1614 178 35 1 chrX 125201505 125201872 -41448424 + Lx5 LINE L1 5755 6080 -970 2 1540 3393 219 55 3 chrX 125201874 125202570 -41447726 + Lx5 LINE L1 6319 7050 0 2 1540 549 158 0 0 chrX 125202694 125202795 -41447501 + (TA)n Simple_repeat Simple_repeat 1 101 0 2 1540 334 319 23 74 chrX 125202983 125203159 -41447137 - RMER4B LTR ERVK -409 176 10 2 1540 548 282 65 80 chrX 125203277 125203765 -41446531 + L1ME2 LINE L1 5666 6137 -27 2 1540 320 239 114 14 chrX 125203850 125203990 -41446306 - Zaphod DNA Tip100 -283 3748 3595 2 1540 189 0 0 0 chrX 125204696 125204717 -41445579 + (CAGA)n Simple_repeat Simple_repeat 2 22 0 2 1540 312 262 0 0 chrX 125204747 125204827 -41445469 - L1MA4 LINE L1 -373 5927 5848 2 1540 240 216 20 0 chrX 125205675 125205726 -41444570 + (TATG)n Simple_repeat Simple_repeat 4 55 0 2 1540 4054 67 4 2 chrX 125207037 125207560 -41442736 - L1_Mm LINE L1 -87 5796 5273 2 1540 2792 187 93 23 chrX 125207560 125208504 -41441792 + RLTR13D1 LTR ERVK 1 1023 0 2 1540 682 67 0 0 chrX 125208504 125208594 -41441702 - L1_Mm LINE L1 -605 5278 5189 2 1540 5170 101 4 4 chrX 125208594 125209332 -41440964 + L1_Mus1 LINE L1 5830 6567 0 2 1540 432 0 0 0 chrX 125209677 125209725 -41440571 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1540 360 0 0 0 chrX 125209725 125209764 -41440532 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1540 26 30 0 0 chrX 125210045 125210078 -41440218 + AT_rich Low_complexity Low_complexity 1 33 0 2 1540 7227 81 7 5 chrX 125210187 125211527 -41438769 + L1Md_F LINE L1 301 1648 -4235 2 1540 658 48 0 19 chrX 125211533 125211639 -41438657 + L1Md_F2 LINE L1 6479 6582 0 2 1540 1896 147 114 0 chrX 125211650 125211984 -41438312 + Lx2A1 LINE L1 6632 7003 -5 2 1540 369 0 0 0 chrX 125212738 125212779 -41437517 + (TAA)n Simple_repeat Simple_repeat 1 41 0 2 1540 225 65 0 0 chrX 125212781 125212812 -41437484 + (CTA)n Simple_repeat Simple_repeat 1 31 0 2 1540 22 0 0 0 chrX 125212895 125212917 -41437379 + AT_rich Low_complexity Low_complexity 1 22 0 2 1540 544 313 84 58 chrX 125213159 125213553 -41436743 + RMER10A LTR ERVL 19 422 -20 2 1540 15061 154 18 63 chrX 125214323 125217630 -41432666 + L1Md_F2 LINE L1 256 3475 -2408 2 1540 3196 43 2 2 chrX 125217630 125218025 -41432271 + L1Md_F3 LINE L1 6176 6570 -14 3 1540 15061 126 13 31 chrX 125218025 125218357 -41431939 + L1Md_F2 LINE L1 3476 3745 -2138 2 1540 2718 111 0 10 chrX 125218357 125218757 -41431539 + MTA_Mm LTR MaLR 1 396 0 3 1540 4587 133 140 92 chrX 125218757 125219237 -41431059 + MTA_Mm-int LTR MaLR 3 398 -860 3 1540 2416 54 13 3 chrX 125219237 125219555 -41430741 + L1Md_F2 LINE L1 6262 6582 0 3 1540 4587 125 51 43 chrX 125219555 125220254 -41430042 + MTA_Mm-int LTR MaLR 362 1098 0 3 1540 2749 117 2 5 chrX 125220254 125220651 -41429645 + MTA_Mm LTR MaLR 1 396 0 3 1540 7185 124 3 4 chrX 125221334 125222503 -41427793 + L1Md_F2 LINE L1 4418 5585 -298 2 1540 8206 37 0 1 chrX 125222515 125223486 -41426810 + L1Md_F2 LINE L1 5598 6567 -15 2 1540 21 71 0 0 chrX 125223486 125223528 -41426768 + AT_rich Low_complexity Low_complexity 1 42 0 3 1540 1474 184 80 58 chrX 125223802 125224178 -41426118 - ORR1C2 LTR MaLR 0 384 1 3 1540 226 256 179 0 chrX 125224221 125224299 -41425997 + ID_B1 SINE B4 127 218 -6 3 1540 621 128 0 0 chrX 125224303 125224405 -41425891 + (GA)n Simple_repeat Simple_repeat 2 103 0 3 1540 566 232 29 88 chrX 125224648 125224818 -41425478 - B2_Mm2 SINE B2 -31 164 5 3 1540 355 236 287 16 chrX 125224895 125225024 -41425272 - ORR1D2 LTR MaLR -38 332 169 3 1540 2925 198 40 40 chrX 125225082 125225724 -41424572 + RLTR26 LTR ERVK 1 642 0 3 1540 372 165 0 0 chrX 125226065 125226156 -41424140 + GA-rich Low_complexity Low_complexity 2 92 0 3 1540 607 267 21 58 chrX 125226294 125226485 -41423811 - MTE2b LTR MaLR -28 351 168 3 1540 585 0 0 0 chrX 125226488 125226553 -41423743 + (TA)n Simple_repeat Simple_repeat 2 66 0 3 1540 7175 61 14 3 chrX 125226556 125227731 -41422565 - L1Md_F2 LINE L1 -12 6570 5384 3 1540 347 333 43 22 chrX 125227731 125227869 -41422427 - MTE2b LTR MaLR -238 141 1 3 1540 743 89 18 0 chrX 125227885 125227997 -41422299 + (TTTC)n Simple_repeat Simple_repeat 4 117 0 3 1540 285 235 0 0 chrX 125228007 125228092 -41422204 + GA-rich Low_complexity Low_complexity 2 86 0 3 1540 21629 51 1 12 chrX 125228839 125232338 -41417958 + L1Md_A LINE L1 625 4079 -1804 3 1540 4022 62 2 13 chrX 125232343 125232865 -41417431 + L1Md_F2 LINE L1 6066 6581 -1 3 1540 304 270 0 11 chrX 125232891 125232981 -41417315 + GA-rich Low_complexity Low_complexity 2 90 0 3 1540 1074 89 0 20 chrX 125233642 125233791 -41416505 + B1_Mus2 SINE Alu 2 147 0 3 1540 202 0 29 57 chrX 125233792 125233827 -41416469 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 3 1540 443 335 20 20 chrX 125234483 125234678 -41415618 - Lx8 LINE L1 -231 7242 7048 3 1540 1029 90 14 0 chrX 125234728 125234872 -41415424 + B1_Mus1 SINE Alu 1 146 -2 3 1540 399 55 13 52 chrX 125234876 125234953 -41415343 + (CAAA)n Simple_repeat Simple_repeat 3 76 0 3 1540 309 297 42 17 chrX 125234974 125235094 -41415202 - Lx8 LINE L1 -487 6986 6864 3 1540 644 49 0 0 chrX 125235108 125235189 -41415107 + U6 snRNA snRNA 27 107 0 3 1540 2891 50 0 3 chrX 125235190 125235548 -41414748 + L1_Mus2 LINE L1 6210 6566 0 3 1540 2026 323 56 35 chrX 125235553 125235595 -41414701 - Lx8 LINE L1 -616 6857 6821 3 1540 1270 169 27 0 chrX 125235595 125235814 -41414482 - URR1B DNA MER1_type 0 225 1 3 1540 2026 318 56 29 chrX 125235814 125236938 -41413358 - Lx8 LINE L1 -653 6820 5666 3 1540 1682 173 58 15 chrX 125238053 125238381 -41411915 + ORR1B2 LTR MaLR 1 342 -25 3 1540 3142 167 145 16 chrX 125238381 125239009 -41411287 + RMER6D LTR ERVK 1 709 -11 3 1540 6478 201 37 21 chrX 125239051 125240534 -41409762 + ORR1B2-int LTR MaLR 3 1509 0 3 1540 1660 211 10 7 chrX 125240534 125240844 -41409452 + ORR1B2 LTR MaLR 1 311 -56 3 1540 360 0 0 0 chrX 125241993 125242033 -41408263 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1540 1631 83 4 4 chrX 125242232 125242461 -41407835 + L1_Mus2 LINE L1 6338 6566 0 3 1540 39465 7 0 1 chrX 125242481 125249271 -41401025 - L1Md_A LINE L1 0 6582 1 3 1540 36 40 0 0 chrX 125249318 125249368 -41400928 + AT_rich Low_complexity Low_complexity 1 50 0 3 1540 21 36 0 0 chrX 125249472 125249500 -41400796 + AT_rich Low_complexity Low_complexity 1 28 0 3 1540 21 0 0 0 chrX 125250267 125250288 -41400008 + AT_rich Low_complexity Low_complexity 1 21 0 3 1540 359 310 126 6 chrX 125250434 125250609 -41399687 + MIRb SINE MIR 63 258 -10 3 1540 999 90 15 0 chrX 125250611 125250744 -41399552 + B1_Mus1 SINE Alu 1 135 -13 3 1540 295 352 59 48 chrX 125250807 125250992 -41399304 + MLT1G1 LTR MaLR 26 250 -345 3 1540 478 339 81 25 chrX 125251013 125251210 -41399086 + MLT1G1 LTR MaLR 372 579 0 3 1540 243 0 0 0 chrX 125251461 125251488 -41398808 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1540 629 220 28 14 chrX 125251948 125252091 -41398205 - B1_Mur4 SINE Alu -5 145 1 3 1540 21 0 0 0 chrX 125252118 125252139 -41398157 + AT_rich Low_complexity Low_complexity 1 21 0 3 1540 369 0 0 0 chrX 125256449 125256490 -41393806 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1540 21 0 0 0 chrX 125256670 125256691 -41393605 + AT_rich Low_complexity Low_complexity 1 21 0 3 1540 276 290 14 0 chrX 125257000 125257069 -41393227 - MER112 DNA MER1_type -191 70 1 3 1540 597 250 23 0 chrX 125257090 125257218 -41393078 + B1_Mur2 SINE Alu 17 147 -2 3 1540 783 222 0 14 chrX 125257245 125257391 -41392905 + B1_Mur4 SINE Alu 6 149 -1 3 1540 206 167 0 36 chrX 125257414 125257470 -41392826 + GA-rich Low_complexity Low_complexity 1 54 0 3 1540 235 188 0 20 chrX 125258502 125258551 -41391745 - U5 snRNA snRNA -67 49 2 3 1540 242 300 50 0 chrX 125258857 125258937 -41391359 + MIR SINE MIR 78 161 -101 3 1540 4481 111 38 30 chrX 125259133 125259879 -41390417 - MTB-int LTR MaLR -346 752 1 3 1540 2441 92 114 0 chrX 125259879 125260238 -41390058 - MTB LTR MaLR 0 400 1 3 1540 1097 102 51 11 chrX 125260241 125260485 -41389811 + L1_Mus1 LINE L1 6255 6497 -141 3 1540 2704 39 15 194 chrX 125260485 125260960 -41389336 + RLTR10 LTR ERVK 1 390 0 3 1540 20309 36 30 14 chrX 125260960 125263579 -41386717 + IAPEz-int LTR ERVK 8 2670 -3811 3 1540 8932 23 2 5 chrX 125263560 125264637 -41385659 + IAPEz-int LTR ERVK 5403 6476 -5 3 1540 3011 15 0 0 chrX 125264659 125264996 -41385300 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1540 736 97 9 0 chrX 125264996 125265110 -41385186 + L1_Mus1 LINE L1 6452 6566 -1 3 1540 415 288 6 76 chrX 125265876 125266034 -41384262 + B1F SINE Alu 1 147 -2 3 1540 361 311 0 0 chrX 125266113 125266210 -41384086 - B1_Mur1 SINE Alu -29 120 24 3 1540 464 333 7 0 chrX 125266942 125267083 -41383213 + MIR SINE MIR 53 194 -68 3 1540 750 289 85 26 chrX 125268258 125268564 -41381732 - MLT1B LTR MaLR -23 367 44 3 1540 218 286 25 49 chrX 125268891 125268972 -41381324 - MIRb SINE MIR -125 143 65 3 1540 5859 209 37 30 chrX 125269319 125270707 -41379589 + Lx5 LINE L1 5644 7040 -10 3 1540 425 203 423 7 chrX 125271635 125271784 -41378512 + B3 SINE B2 1 211 -5 3 1540 184 276 26 0 chrX 125272056 125272132 -41378164 - MIR SINE MIR -7 255 178 3 1540 192 345 24 0 chrX 125272279 125272363 -41377933 - MIRb SINE MIR -63 205 120 3 1540 1754 167 21 145 chrX 125272381 125272858 -41377438 + RLTR23 LTR ERV1 10 427 -3 3 1540 189 0 0 0 chrX 125273181 125273202 -41377094 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 1540 775 105 111 16 chrX 125273356 125273482 -41376814 + B1_Mus1 SINE Alu 2 139 -9 3 1540 319 311 98 43 chrX 125274104 125274359 -41375937 + MMERGLN-int LTR ERV1 1448 1716 -6062 3 1540 454 298 30 60 chrX 125274705 125275131 -41375165 + MMERGLN-int LTR ERV1 1812 2447 -5109 3 1540 1069 338 57 52 chrX 125275326 125276563 -41373733 + MMERGLN-int LTR ERV1 2658 3899 -3657 3 1540 684 268 20 6 chrX 125276907 125277126 -41373170 + MMERGLN-int LTR ERV1 4972 5204 -2352 3 1540 391 267 151 75 chrX 125278827 125279066 -41371230 + RLTR6-int LTR ERV1 7330 7586 -192 3 1540 8997 114 33 5 chrX 125279210 125280617 -41369679 - L1_Mm LINE L1 -1438 4445 3000 3 1540 1434 195 4 165 chrX 125280621 125281130 -41369166 + RLTR23 LTR ERV1 4 430 0 3 1540 789 11 0 0 chrX 125281441 125281531 -41368765 + (CA)n Simple_repeat Simple_repeat 1 90 0 3 1540 272 171 26 0 chrX 125281980 125282056 -41368240 + (AATAG)n Simple_repeat Simple_repeat 2 79 0 3 1540 336 164 0 0 chrX 125282871 125282938 -41367358 + CT-rich Low_complexity Low_complexity 4 70 0 3 1540 283 363 99 36 chrX 125282974 125283197 -41367099 + MLT1H1 LTR MaLR 44 283 -308 3 1540 633 248 7 0 chrX 125283236 125283373 -41366923 + B1_Mur1 SINE Alu 1 138 -11 3 1540 4055 138 97 63 chrX 125283809 125284685 -41365611 - RMER17A2 LTR ERVK 0 906 1 3 1540 279 71 0 0 chrX 125285979 125286021 -41364275 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1540 553 295 0 0 chrX 125286022 125286134 -41364162 - RSINE1 SINE B4 -41 124 13 3 1540 213 299 0 27 chrX 125286268 125286283 -41364013 + (TTTG)n Simple_repeat Simple_repeat 4 16 0 3 1540 486 0 0 0 chrX 125286283 125286337 -41363959 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 1540 213 299 0 27 chrX 125286337 125286431 -41363865 + (TTTG)n Simple_repeat Simple_repeat 2 95 0 3 1540 234 274 0 0 chrX 125286338 125286411 -41363885 + (TCTCTG)n Simple_repeat Simple_repeat 6 78 0 3 1540 304 324 92 88 chrX 125286443 125286727 -41363569 - B4A SINE B4 -6 286 2 3 1540 222 37 0 0 chrX 125287704 125287731 -41362565 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 1540 5755 113 5 1 chrX 125287941 125288805 -41361491 + L1_Mm LINE L1 4562 5428 -455 3 1540 459 48 0 0 chrX 125289387 125289449 -41360847 + (TATG)n Simple_repeat Simple_repeat 2 63 0 3 1540 982 298 84 25 chrX 125290366 125290734 -41359562 + MER31A LTR ERV1 1 390 -95 3 1540 1533 251 71 11 chrX 125290755 125291137 -41359159 - MTD LTR MaLR -14 405 1 3 1540 285 240 0 13 chrX 125291137 125291213 -41359083 + MER31A LTR ERV1 407 481 -4 3 1540 436 199 335 43 chrX 125291235 125291393 -41358903 - B3 SINE B2 -7 209 6 3 1540 21 0 0 0 chrX 125292291 125292312 -41357984 + AT_rich Low_complexity Low_complexity 1 21 0 3 1540 29576 138 13 31 chrX 125293822 125300228 -41350068 - L1_Mus1 LINE L1 -14 6553 277 3 1540 637 132 19 0 chrX 125300412 125300518 -41349778 - Lx3A LINE L1 -570 6411 6304 3 1540 3394 131 38 13 chrX 125300518 125301073 -41349223 + Lx3A LINE L1 6410 6978 -3 3 1540 401 229 250 6 chrX 125301222 125301398 -41348898 + Lx9 LINE L1 7418 7636 -8 3 1540 486 0 0 0 chrX 125301475 125301529 -41348767 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 1540 33 43 0 0 chrX 125301732 125301779 -41348517 + AT_rich Low_complexity Low_complexity 1 47 0 3 1540 615 333 0 18 chrX 125301796 125301967 -41348329 - B3 SINE B2 -42 174 7 3 1540 867 268 5 55 chrX 125302095 125302312 -41347984 - MTD LTR MaLR -213 206 1 3 1540 609 124 0 0 chrX 125302451 125302548 -41347748 + (GGGA)n Simple_repeat Simple_repeat 4 100 0 3 1540 330 342 72 54 chrX 125302569 125302736 -41347560 - B4A SINE B4 -23 269 100 3 1540 340 272 21 52 chrX 125302781 125302878 -41347418 - B4A SINE B4 -195 97 4 3 1540 424 267 0 82 chrX 125303903 125304013 -41346283 + MTEa LTR MaLR 3 103 -276 3 1540 358 108 31 0 chrX 125304676 125304741 -41345555 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 192 1307 144 21 45 chrX 125304745 125305035 -41345261 - RMER17C LTR ERVK -3 407 125 4 1541 473 212 9 0 chrX 125305058 125305171 -41345125 + (TA)n Simple_repeat Simple_repeat 1 114 0 4 1541 24 32 0 0 chrX 125305206 125305237 -41345059 + AT_rich Low_complexity Low_complexity 1 31 0 4 1541 424 308 30 37 chrX 125305240 125305375 -41344921 + B1F SINE Alu 9 142 -7 4 1541 516 191 28 37 chrX 125305389 125305498 -41344798 - Lx9 LINE L1 -373 7271 7164 4 1541 226 222 40 27 chrX 125305507 125305524 -41344772 + Lx9 LINE L1 7300 7318 -326 4 1541 243 0 0 0 chrX 125305524 125305551 -41344745 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1541 226 222 40 27 chrX 125305551 125305607 -41344689 + Lx9 LINE L1 7319 7373 -271 4 1541 183 129 0 0 chrX 125305615 125305646 -41344650 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1541 249 200 158 85 chrX 125306311 125306393 -41343903 - Lx9 LINE L1 -307 7337 7250 4 1541 228 241 76 0 chrX 125306401 125306480 -41343816 - L1MA5 LINE L1 -6 6294 6210 4 1541 216 0 0 0 chrX 125306554 125306578 -41343718 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 4 1541 8460 25 1 0 chrX 125306599 125308108 -41342188 - L1Md_T LINE L1 0 6582 5072 4 1541 1974 124 19 0 chrX 125308132 125308447 -41341849 - Lx2A1 LINE L1 -1 7007 6687 4 1541 235 392 118 0 chrX 125308595 125308697 -41341599 + PB1D7 SINE Alu 2 115 -5 4 1541 345 332 79 86 chrX 125309167 125309609 -41340687 + MamRep605 Unknown Unknown 185 623 -253 4 1541 261 0 0 0 chrX 125310177 125310206 -41340090 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1541 25 51 0 0 chrX 125310239 125310278 -41340018 + AT_rich Low_complexity Low_complexity 1 39 0 4 1541 207 69 0 0 chrX 125311916 125311945 -41338351 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 1541 818 319 46 46 chrX 125312124 125312453 -41337843 - MLT1A0 LTR MaLR -25 340 12 4 1541 394 171 0 22 chrX 125312457 125312547 -41337749 - Lx6 LINE L1 -1649 5811 5724 4 1541 1724 302 59 80 chrX 125312554 125313090 -41337206 + Lx5 LINE L1 5945 6462 -588 4 1541 524 77 13 0 chrX 125313090 125313168 -41337128 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 4 1541 1724 302 59 80 chrX 125313168 125313467 -41336829 + Lx5 LINE L1 6463 6762 -288 4 1541 302 80 0 0 chrX 125313473 125313523 -41336773 + Lx2A LINE L1 6956 7005 -3 4 1541 443 244 100 36 chrX 125315639 125315779 -41334517 - B1_Mur3 SINE Alu 0 149 1 4 1541 1417 78 5 0 chrX 125316411 125316602 -41333694 + L1_Mus1 LINE L1 6376 6567 0 4 1541 293 250 24 36 chrX 125316666 125316749 -41333547 + B3 SINE B2 134 215 -1 4 1541 483 240 77 0 chrX 125316926 125317030 -41333266 + B1_Mm SINE Alu 1 112 -35 4 1541 255 253 11 32 chrX 125317193 125317287 -41333009 + CT-rich Low_complexity Low_complexity 4 95 0 4 1541 374 334 94 56 chrX 125318109 125318288 -41332008 - MLT1C LTR MaLR -95 372 200 4 1541 4033 35 0 0 chrX 125318288 125318768 -41331528 - L1Md_F2 LINE L1 0 6582 6103 4 1541 374 334 94 56 chrX 125318768 125318927 -41331369 - MLT1C LTR MaLR -268 199 22 4 1541 189 321 19 0 chrX 125320179 125320232 -41330064 - L3b LINE CR1 0 482 429 4 1541 320 234 112 0 chrX 125321001 125321108 -41329188 - L1MEf LINE L1 -4111 2089 1971 4 1541 397 312 139 33 chrX 125321459 125321674 -41328622 - MLT1J LTR MaLR -17 495 258 4 1541 344 322 82 44 chrX 125321696 125321878 -41328418 - MLT1J LTR MaLR -314 198 10 4 1541 1547 200 53 0 chrX 125322490 125322810 -41327486 + Lx6 LINE L1 6413 6749 -711 4 1541 817 161 0 20 chrX 125323373 125323519 -41326777 + L1_Mur2 LINE L1 5534 5676 -201 4 1541 203 147 0 0 chrX 125324423 125324457 -41325839 + (TTCTCC)n Simple_repeat Simple_repeat 2 35 0 4 1541 251 224 17 17 chrX 125324783 125324842 -41325454 + CT-rich Low_complexity Low_complexity 1 59 0 4 1541 8206 141 17 4 chrX 125325503 125326817 -41323479 + Lx2B LINE L1 5670 7000 0 4 1541 225 140 58 39 chrX 125326826 125326878 -41323418 + L1VL4 LINE L1 116 168 -6351 4 1541 10785 142 25 33 chrX 125326845 125329340 -41320956 + L1VL4 LINE L1 525 2879 -938 4 1541 30082 37 0 2 chrX 125329341 125334580 -41315716 + L1Md_T LINE L1 271 5589 -297 4 1541 8406 34 0 0 chrX 125334580 125335576 -41314720 + L1Md_T LINE L1 5590 6585 0 4 1541 13924 164 26 2 chrX 125335582 125339168 -41311128 + L1_Mus3 LINE L1 2959 6638 0 4 1541 515 296 83 51 chrX 125339641 125339858 -41310438 + ID_B1 SINE B4 1 224 0 4 1541 663 281 203 26 chrX 125340290 125340640 -41309656 + L2 LINE L2 2433 2844 -575 4 1541 1729 166 68 0 chrX 125341005 125341313 -41308983 - Lx2B LINE L1 -8 6992 6664 4 1541 268 284 73 12 chrX 125341584 125341666 -41308630 + LTR16A1 LTR ERVL 250 336 -120 4 1541 260 290 0 0 chrX 125341926 125341988 -41308308 - ID4 SINE ID -19 64 3 4 1541 183 42 0 0 chrX 125342423 125342447 -41307849 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 4 1541 562 307 88 0 chrX 125342573 125342634 -41307662 + B3 SINE B2 3 66 -150 4 1541 278 26 26 0 chrX 125342634 125342673 -41307623 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1541 562 307 88 0 chrX 125342673 125342803 -41307493 + B3 SINE B2 67 210 -6 4 1541 354 80 0 0 chrX 125342840 125342890 -41307406 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1541 182 107 17 51 chrX 125344383 125344442 -41305854 + T-rich Low_complexity Low_complexity 3 59 0 4 1541 462 271 58 58 chrX 125344523 125344660 -41305636 - B3A SINE B2 -56 142 6 4 1541 245 307 13 13 chrX 125344738 125344814 -41305482 + ID4 SINE ID 4 79 -4 4 1541 366 286 79 0 chrX 125344838 125345016 -41305280 + MER53 DNA hAT 2 193 0 4 1541 281 330 41 0 chrX 125345464 125345561 -41304735 + PB1D10 SINE Alu 6 106 -11 4 1541 1275 97 11 0 chrX 125345561 125345737 -41304559 + B2_Mm1t SINE B2 2 179 -14 4 1541 331 156 14 18 chrX 125345784 125345850 -41304446 + B2_Mm2 SINE B2 46 116 -82 4 1541 252 0 0 0 chrX 125345866 125345894 -41304402 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 4 1541 1212 237 89 118 chrX 125345969 125346428 -41303868 - RLTR41 LTR ERV1 0 446 1 4 1541 7215 130 22 16 chrX 125346662 125348278 -41302018 - L1_Mus3 LINE L1 -17 6980 5333 4 1541 21 36 0 0 chrX 125348942 125348970 -41301326 + AT_rich Low_complexity Low_complexity 1 28 0 4 1541 365 250 90 27 chrX 125349750 125349861 -41300435 + L1_Mur3 LINE L1 290 407 -7305 4 1541 1198 263 0 7 chrX 125350649 125350921 -41299375 + Lx9 LINE L1 7131 7400 -244 4 1541 25 0 0 0 chrX 125351884 125351909 -41298387 + AT_rich Low_complexity Low_complexity 1 25 0 4 1541 349 161 53 8 chrX 125352000 125352131 -41298165 + (TA)n Simple_repeat Simple_repeat 2 138 0 4 1541 5893 132 21 6 chrX 125352729 125353673 -41296623 - RMER17B LTR ERVK 0 958 1 4 1541 635 299 7 0 chrX 125353698 125353845 -41296451 - B3 SINE B2 -5 211 64 4 1541 1084 318 59 28 chrX 125353941 125354849 -41295447 - L1MA9 LINE L1 -64 6248 5303 4 1541 425 307 58 41 chrX 125354882 125355423 -41294873 - L1M2c LINE L1 -4534 2634 2083 4 1541 333 0 0 0 chrX 125355423 125355460 -41294836 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 4 1541 425 307 58 41 chrX 125355460 125355533 -41294763 - L1M2c LINE L1 -5086 2082 2009 4 1541 695 117 6 41 chrX 125355533 125355702 -41294594 + T-rich Low_complexity Low_complexity 3 165 0 4 1541 346 315 174 58 chrX 125355925 125356252 -41294044 - L1M2c LINE L1 -6622 546 182 4 1541 2060 61 0 0 chrX 125356253 125356517 -41293779 - L1Md_A LINE L1 0 6582 6319 4 1541 200 313 36 12 chrX 125357250 125357334 -41292962 - L2a LINE L2 -5 3421 3336 4 1541 596 238 40 178 chrX 125357694 125357919 -41292377 + B3 SINE B2 1 214 -2 4 1541 380 326 53 0 chrX 125358176 125358308 -41291988 - MIR3 SINE MIR 0 208 70 4 1541 1216 74 79 11 chrX 125359090 125359268 -41291028 - B2_Mm2 SINE B2 -4 191 2 4 1541 366 325 113 50 chrX 125359298 125359457 -41290839 - B3 SINE B2 -7 209 41 4 1541 21 0 0 0 chrX 125359463 125359484 -41290812 + AT_rich Low_complexity Low_complexity 1 21 0 4 1541 309 352 93 57 chrX 125359920 125360308 -41289988 + MLT1C LTR MaLR 66 467 0 4 1541 296 276 241 28 chrX 125360483 125360591 -41289705 - B3 SINE B2 -85 131 1 4 1541 1258 212 143 12 chrX 125360620 125360949 -41289347 - ORR1D1 LTR MaLR -2 372 1 4 1541 315 0 0 0 chrX 125361195 125361230 -41289066 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1541 1184 74 0 0 chrX 125361230 125361378 -41288918 - B1_Mus1 SINE Alu 0 148 1 4 1541 28 0 0 0 chrX 125361529 125361557 -41288739 + AT_rich Low_complexity Low_complexity 1 28 0 4 1541 3027 74 5 2 chrX 125364659 125365054 -41285242 + MTA_Mm LTR MaLR 1 396 0 4 1541 342 0 0 0 chrX 125366828 125366866 -41283430 + (TA)n Simple_repeat Simple_repeat 1 38 0 4 1541 369 0 0 0 chrX 125366866 125366906 -41283390 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 1541 208 178 22 0 chrX 125367432 125367477 -41282819 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 4 1541 249 33 0 0 chrX 125369214 125369244 -41281052 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1541 3337 60 0 2 chrX 125369263 125369694 -41280602 - L1Md_F2 LINE L1 -12 6570 6141 4 1541 231 367 48 48 chrX 125370235 125370424 -41279872 - L2c LINE L2 -16 3371 3183 4 1541 252 330 56 41 chrX 125370533 125370729 -41279567 + L2c LINE L2 3189 3387 0 4 1541 393 102 0 0 chrX 125370901 125370960 -41279336 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1541 318 67 0 0 chrX 125371301 125371346 -41278950 + (TTA)n Simple_repeat Simple_repeat 1 45 0 4 1541 31842 90 40 3 chrX 125371346 125377129 -41273167 - L1Md_F2 LINE L1 -23 6559 561 4 1541 214 191 71 0 chrX 125377779 125377821 -41272475 + B3A SINE B2 74 118 -80 4 1541 284 132 0 14 chrX 125378756 125378825 -41271471 + Lx LINE L1 6585 6652 -2 4 1541 252 0 0 0 chrX 125379262 125379290 -41271006 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1541 346 148 16 16 chrX 125379320 125379382 -41270914 + MER5A1 DNA MER1_type 101 162 -4 4 1541 405 0 0 0 chrX 125379450 125379495 -41270801 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1541 218 355 63 9 chrX 125379558 125379669 -41270627 + PB1D10 SINE Alu 1 117 0 4 1541 228 279 0 0 chrX 125380437 125380498 -41269798 - MER5A1 DNA MER1_type -20 146 86 5 1541 322 347 84 8 chrX 125381839 125381958 -41268338 - MER5A DNA MER1_type -16 173 46 5 1541 2255 162 16 16 chrX 125382266 125382711 -41267585 + L1_Mur2 LINE L1 2702 3146 -2731 5 1541 2795 126 2 0 chrX 125382703 125383147 -41267149 + L1_Mm LINE L1 2639 3083 -2800 5 1541 4384 192 28 16 chrX 125383139 125384057 -41266239 + Lx4B LINE L1 6101 7029 -29 5 1541 378 0 0 0 chrX 125384057 125384099 -41266197 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1541 243 191 0 0 chrX 125384099 125384141 -41266155 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 5 1541 273 181 28 5 chrX 125384322 125384401 -41265895 + L1MB2 LINE L1 5758 5842 -326 5 1541 509 283 43 63 chrX 125384433 125384686 -41265610 + L1MB2 LINE L1 5819 6066 -105 5 1541 184 219 0 0 chrX 125385070 125385102 -41265194 - MIRb SINE MIR -203 65 34 5 1541 250 379 19 10 chrX 125386293 125386397 -41263899 + MT2A LTR ERVL 134 238 -295 5 1541 215 61 30 0 chrX 125386406 125386439 -41263857 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 5 1541 733 116 0 74 chrX 125386723 125386872 -41263424 - L1Md_F2 LINE L1 -3 6579 6442 5 1541 312 286 223 5 chrX 125386880 125387073 -41263223 + MT2A LTR ERVL 279 513 -20 5 1541 221 172 35 0 chrX 125387084 125387142 -41263154 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 5 1541 809 314 142 23 chrX 125389899 125390209 -41260087 - MTE2a LTR MaLR -32 347 1 5 1541 669 338 11 47 chrX 125390227 125390503 -41259793 + B4A SINE B4 1 266 -26 5 1541 354 61 0 0 chrX 125390504 125390553 -41259743 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 1541 264 170 0 0 chrX 125390554 125390607 -41259689 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1541 14678 171 37 31 chrX 125390898 125392781 -41257515 + L1Md_F LINE L1 279 2218 -3665 5 1541 950 113 42 0 chrX 125392781 125392923 -41257373 + B1_Mus1 SINE Alu 1 148 0 5 1541 711 0 0 0 chrX 125392927 125393006 -41257290 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 5 1541 14678 133 10 13 chrX 125393006 125394522 -41255774 + L1Md_F LINE L1 2219 3714 -2169 5 1541 20307 129 20 101 chrX 125394519 125395324 -41254972 + L1_Mus2 LINE L1 2109 2570 -3313 5 1541 3992 46 2 0 chrX 125395324 125395806 -41254490 + L1Md_T LINE L1 6099 6581 -1 5 1541 20307 129 20 101 chrX 125395806 125397488 -41252808 + L1_Mus2 LINE L1 2571 4196 -1687 5 1541 333 0 0 0 chrX 125397488 125397525 -41252771 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 1541 324 0 0 0 chrX 125397525 125397560 -41252736 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1541 20307 129 20 101 chrX 125397560 125398563 -41251733 + L1_Mus2 LINE L1 4197 5231 -652 5 1541 690 31 10 20 chrX 125398563 125398662 -41251634 + (TA)n Simple_repeat Simple_repeat 2 99 0 5 1541 20307 109 26 30 chrX 125398662 125399934 -41250362 + L1_Mus2 LINE L1 5232 6563 -3 5 1541 317 275 104 22 chrX 125400058 125400192 -41250104 + L1ME3B LINE L1 5328 5472 -768 5 1541 232 244 62 5 chrX 125400217 125400314 -41249982 + L1ME3B LINE L1 5523 5631 -542 5 1541 479 320 102 7 chrX 125400372 125400794 -41249502 + L1ME3B LINE L1 5729 6190 -50 5 1541 234 347 0 0 chrX 125400922 125400994 -41249302 + Lx9 LINE L1 7358 7429 -215 5 1541 342 45 0 0 chrX 125401019 125401063 -41249233 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1541 27838 126 20 23 chrX 125401091 125402568 -41247728 + L1_Mus3 LINE L1 492 1968 -3915 5 1541 366 23 0 0 chrX 125402568 125402611 -41247685 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1541 27838 134 13 20 chrX 125402611 125403792 -41246504 + L1_Mus3 LINE L1 1969 3179 -2704 5 1541 301 22 21 21 chrX 125403792 125403839 -41246457 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 5 1541 27838 134 13 20 chrX 125403839 125405661 -41244635 + L1_Mus3 LINE L1 3180 5008 -875 5 1541 4647 47 54 0 chrX 125405661 125406258 -41244038 - L1_Mus1 LINE L1 0 6567 5939 5 1541 27838 132 7 8 chrX 125406258 125407946 -41242350 + L1_Mus3 LINE L1 5009 6630 -8 5 1541 361 259 17 0 chrX 125408342 125408457 -41241839 + MTEb LTR MaLR 261 379 0 5 1541 447 19 0 0 chrX 125408513 125408565 -41241731 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1541 429 36 0 0 chrX 125409152 125409207 -41241089 + (ACTAG)n Simple_repeat Simple_repeat 5 59 0 5 1541 26 30 0 0 chrX 125409387 125409420 -41240876 + AT_rich Low_complexity Low_complexity 1 33 0 5 1541 401 328 61 61 chrX 125410307 125410521 -41239775 + MER20 DNA MER1_type 1 214 -5 5 1541 273 377 71 86 chrX 125411056 125411477 -41238819 + LTR16A1 LTR ERVL 32 446 -10 5 1541 821 94 71 0 chrX 125411617 125411744 -41238552 + B1_Mus1 SINE Alu 2 137 -11 5 1541 245 51 0 25 chrX 125411744 125411784 -41238512 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1541 1077 209 23 0 chrX 125411820 125412040 -41238256 + URR1B DNA MER1_type 1 225 0 5 1541 35804 50 9 1 chrX 125412173 125417495 -41232801 + L1Md_T LINE L1 284 5586 -297 5 1541 8339 39 0 0 chrX 125417495 125418490 -41231806 + L1Md_T LINE L1 5587 6581 -1 5 1541 27 62 0 0 chrX 125419478 125419526 -41230770 + AT_rich Low_complexity Low_complexity 1 48 0 5 1541 465 336 0 0 chrX 125421516 125421638 -41228658 + RSINE1 SINE B4 3 124 -41 5 1541 281 241 153 24 chrX 125422556 125422641 -41227655 - ORR1A4 LTR MaLR -73 346 251 5 1541 789 225 89 10 chrX 125422626 125422852 -41227444 - RLTR11A LTR ERVK -60 468 227 5 1541 282 87 0 0 chrX 125422852 125422898 -41227398 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 1541 1328 182 24 8 chrX 125422898 125423153 -41227143 - RLTR11A LTR ERVK -269 259 1 5 1541 180 0 0 0 chrX 125423183 125423203 -41227093 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 5 1541 1377 308 21 17 chrX 125424417 125424892 -41225404 - Lx8 LINE L1 -492 6981 6505 5 1541 315 115 19 0 chrX 125424892 125424944 -41225352 + ORR1C2 LTR MaLR 1 53 -331 5 1541 23 33 0 0 chrX 125425206 125425236 -41225060 + AT_rich Low_complexity Low_complexity 1 30 0 5 1541 508 298 95 0 chrX 125425236 125425394 -41224902 - Lx4B LINE L1 -8 7050 6878 5 1541 3656 172 15 7 chrX 125425380 125426262 -41224034 - Lx4B LINE L1 -811 6247 5343 5 1541 3356 148 48 2 chrX 125426268 125426892 -41223404 - Lx4B LINE L1 -1027 4850 4198 5 1541 1751 211 26 18 chrX 125426907 125427589 -41222707 - Lx4B LINE L1 -4175 1711 1013 5 1541 1005 198 11 85 chrX 125427589 125427849 -41222447 - ORR1A4 LTR MaLR -88 241 1 5 1541 282 164 77 64 chrX 125427851 125427929 -41222367 - L1_Mur3 LINE L1 -445 5435 5357 5 1541 4156 148 50 5 chrX 125428000 125428742 -41221554 + L1VL4 LINE L1 194 968 -5334 5 1541 432 0 0 0 chrX 125428785 125428833 -41221463 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1541 396 125 0 0 chrX 125429196 125429260 -41221036 + (TG)n Simple_repeat Simple_repeat 2 65 0 5 1541 361 354 23 38 chrX 125429358 125429490 -41220806 - B4 SINE B4 -82 210 81 5 1541 362 229 188 0 chrX 125429491 125429587 -41220709 - PB1D9 SINE Alu -6 114 1 5 1541 189 107 0 0 chrX 125429604 125429632 -41220664 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 5 1541 1110 82 14 0 chrX 125429632 125429778 -41220518 - B1_Mus1 SINE Alu 0 148 1 5 1541 389 156 112 38 chrX 125429787 125429867 -41220429 - B4 SINE B4 -206 86 1 5 1541 1345 192 0 0 chrX 125430199 125430439 -41219857 + L1Md_F2 LINE L1 344 583 -6033 5 1541 934 226 169 25 chrX 125430452 125430806 -41219490 + RLTR9E LTR ERVK 5 409 0 5 1541 6056 144 41 20 chrX 125430806 125431850 -41218446 + L1Md_F LINE L1 74 1139 -5380 5 192 18020 140 6 96 chrX 125431816 125437083 -41213213 + L1Md_F2 LINE L1 1203 5582 -304 5 1542 8044 45 2 2 chrX 125437087 125438083 -41212213 + L1Md_F2 LINE L1 5587 6582 0 5 1542 4003 92 23 0 chrX 125438109 125438684 -41211612 + L1_Mm LINE L1 2136 2723 -3160 5 1542 1665 108 0 0 chrX 125438672 125438921 -41211375 + L1_Mm LINE L1 3768 4016 -1867 5 1542 945 65 0 0 chrX 125439259 125439397 -41210899 + (CAAAC)n Simple_repeat Simple_repeat 2 139 0 5 1542 39557 6 0 0 chrX 125439454 125445804 -41204492 - L1Md_A LINE L1 0 6582 232 5 1542 7792 72 2 2 chrX 125445824 125446845 -41203451 - L1_Mus1 LINE L1 -1 6566 5572 5 1542 647 221 7 27 chrX 125447853 125448002 -41202294 + B1_Mur4 SINE Alu 5 150 0 5 1542 313 267 169 17 chrX 125448194 125448453 -41201843 + L1MDa LINE L1 1267 1577 -5056 5 1542 1246 251 108 14 chrX 125448453 125448799 -41201497 - ORR1D2 LTR MaLR 0 379 1 5 1542 682 236 68 29 chrX 125448799 125449004 -41201292 - ORR1D2-int LTR MaLR -1157 213 1 5 1542 1150 280 94 15 chrX 125449006 125449347 -41200949 - ORR1D2 LTR MaLR -2 368 1 5 1542 577 272 101 77 chrX 125450634 125450921 -41199375 + Lx8 LINE L1 7155 7448 -25 5 1542 21 36 0 0 chrX 125450925 125450953 -41199343 + AT_rich Low_complexity Low_complexity 1 28 0 5 1542 254 251 75 52 chrX 125452200 125452310 -41197986 + MLT1A1 LTR MaLR 296 397 -11 5 1542 2078 161 8 0 chrX 125452588 125452968 -41197328 + L1_Mur1 LINE L1 4986 5368 -518 5 1542 1124 270 70 38 chrX 125452984 125453611 -41196685 - L1M2 LINE L1 -1962 4181 3535 5 1542 22 0 0 0 chrX 125453621 125453643 -41196653 + AT_rich Low_complexity Low_complexity 1 22 0 5 1542 1262 285 69 78 chrX 125453807 125454681 -41195615 - L1_Mur3 LINE L1 -335 5545 4680 5 1542 362 250 96 32 chrX 125454714 125454871 -41195425 - L1_Rod LINE L1 -2425 3422 3256 5 1542 363 167 0 0 chrX 125454876 125454942 -41195354 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 1542 321 355 38 13 chrX 125454942 125455099 -41195197 - RSINE1 SINE B4 0 165 5 5 1542 180 0 0 0 chrX 125456903 125456923 -41193373 + (ATG)n Simple_repeat Simple_repeat 2 21 0 5 1542 518 259 15 15 chrX 125457033 125457170 -41193126 + MT2A LTR ERVL 87 223 -310 5 1542 183 100 0 0 chrX 125457314 125457344 -41192952 + (TTG)n Simple_repeat Simple_repeat 2 31 0 5 1542 1293 321 51 25 chrX 125457546 125458099 -41192197 - Lx9 LINE L1 -162 7482 6916 5 1542 6592 139 7 8 chrX 125458139 125459159 -41191137 - Lx LINE L1 -7 6647 5629 5 1542 550 66 0 0 chrX 125459171 125459247 -41191049 - L1_Mur1 LINE L1 -853 5033 4958 5 1542 6796 151 19 25 chrX 125459250 125460517 -41189779 + L1_Mur2 LINE L1 3657 4915 -962 5 1542 1043 327 77 45 chrX 125460515 125461050 -41189246 - Lx8 LINE L1 -725 6748 6197 5 1542 216 86 0 0 chrX 125461090 125461125 -41189171 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 5 1542 290 151 14 0 chrX 125461170 125461243 -41189053 + (TATG)n Simple_repeat Simple_repeat 3 76 0 5 1542 4599 206 56 21 chrX 125461243 125461854 -41188442 - Lx4B LINE L1 -19 6981 6335 5 1542 5096 126 60 4 chrX 125461854 125462680 -41187616 + Lx3B LINE L1 6097 6969 -4 5 1542 347 41 0 20 chrX 125462684 125462734 -41187562 + (TAA)n Simple_repeat Simple_repeat 1 49 0 5 1542 4599 195 50 19 chrX 125462734 125463301 -41186995 - Lx4B LINE L1 -724 6334 5745 5 1542 970 119 24 0 chrX 125463301 125463469 -41186827 + (TTTC)n Simple_repeat Simple_repeat 3 174 0 5 1542 922 144 40 0 chrX 125463469 125463486 -41186810 - Lx3_Mus LINE L1 -1265 5744 5726 5 1542 488 122 12 0 chrX 125463487 125463569 -41186727 + (TTCTCC)n Simple_repeat Simple_repeat 3 85 0 5 1542 2830 112 19 0 chrX 125463579 125463999 -41186297 - L1_Mus3 LINE L1 -1 6637 6210 5 1542 877 154 7 0 chrX 125464023 125464166 -41186130 - Lx2B LINE L1 -1248 5752 5609 5 1542 342 300 94 59 chrX 125464200 125464402 -41185894 + HAL1b LINE L1 1798 2006 -3 5 1542 11898 83 9 22 chrX 125465199 125466417 -41183879 + L1Md_F2 LINE L1 3903 5127 -756 6 1542 7140 48 2 1 chrX 125466417 125467302 -41182994 + L1Md_F2 LINE L1 5681 6566 -16 6 1542 11898 83 9 22 chrX 125467302 125467788 -41182508 + L1Md_F2 LINE L1 5128 5585 -298 6 1542 7472 73 0 4 chrX 125467789 125468777 -41181519 + L1Md_F2 LINE L1 5587 6570 -12 6 1542 22 88 0 0 chrX 125469470 125469527 -41180769 + AT_rich Low_complexity Low_complexity 1 57 0 6 1542 451 244 26 0 chrX 125469703 125469818 -41180478 - PB1D9 SINE Alu -2 118 1 6 1542 536 42 0 14 chrX 125470432 125470504 -41179792 + (TC)n Simple_repeat Simple_repeat 2 72 0 6 1542 390 292 44 2 chrX 125471847 125471996 -41178300 + RLTR42-int LTR ERVK 1639 1790 -3732 6 1542 2297 206 96 52 chrX 125472042 125472702 -41177594 - RMER6C LTR ERVK 0 690 2 6 1542 3848 89 27 3 chrX 125472735 125473323 -41176973 - MusHAL1 LINE L1 -281 2431 1830 6 1542 3266 160 20 9 chrX 125473323 125473716 -41176580 + L1_Mur2 LINE L1 3637 4032 -1845 6 1542 3438 65 0 11 chrX 125473716 125474170 -41176126 + L1Md_F2 LINE L1 6132 6580 -2 6 1542 3266 160 20 9 chrX 125474170 125474419 -41175877 + L1_Mur2 LINE L1 4033 4285 -1592 6 1542 549 281 30 0 chrX 125474480 125474615 -41175681 - B1F SINE Alu -6 143 5 6 1542 205 369 113 36 chrX 125475527 125475749 -41174547 - MIR SINE MIR -4 258 20 6 1542 24 0 0 0 chrX 125476070 125476094 -41174202 + AT_rich Low_complexity Low_complexity 1 24 0 6 1542 929 72 0 8 chrX 125476680 125476806 -41173490 + B1_Mm SINE Alu 17 141 -6 6 1542 693 0 0 0 chrX 125476809 125476886 -41173410 + (TAAAA)n Simple_repeat Simple_repeat 5 81 0 6 1542 858 272 102 18 chrX 125477289 125477631 -41172665 + RMER1C Other Other 435 1052 -290 6 1542 10369 168 17 20 chrX 125477633 125480703 -41169593 + Lx2 LINE L1 3924 6985 -12 6 1542 3475 65 0 0 chrX 125480720 125481255 -41169041 - L1Md_F2 LINE L1 -560 6022 5488 6 1542 32198 108 16 5 chrX 125481254 125487832 -41162464 - L1Md_F2 LINE L1 -10 6572 98 6 1542 19130 92 3 10 chrX 125487833 125490608 -41159688 - L1_Mm LINE L1 -381 5502 2748 6 1542 4263 86 10 29 chrX 125490609 125491222 -41159074 + L1Md_F2 LINE L1 5980 6580 -2 6 1542 922 215 50 76 chrX 125491244 125491319 -41158977 + RMER1C Other Other 1048 1124 -218 6 1542 459 92 0 0 chrX 125491319 125491384 -41158912 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 1542 922 215 50 76 chrX 125491384 125491610 -41158686 + RMER1C Other Other 1125 1341 -1 6 1542 455 319 17 81 chrX 125491763 125491937 -41158359 + RSINE1 SINE B4 3 165 0 6 1542 194 174 0 21 chrX 125491938 125491985 -41158311 + (TAA)n Simple_repeat Simple_repeat 2 47 0 6 1542 220 372 13 13 chrX 125492122 125492201 -41158095 - ID4_ SINE ID -3 80 2 6 1542 318 341 30 9 chrX 125492216 125492347 -41157949 - B1F SINE Alu -9 140 7 6 1542 474 302 17 8 chrX 125492988 125493108 -41157188 + B3A SINE B2 1 121 -77 6 1542 690 229 54 6 chrX 125493118 125493285 -41157011 + Lx9 LINE L1 6808 6982 -662 6 1542 7895 54 2 5 chrX 125493299 125494284 -41156012 + L1Md_T LINE L1 5588 6569 -13 6 1542 39305 26 2 7 chrX 125494295 125500000 -41150296 + L1Md_A LINE L1 423 6097 -485 6 1542 4112 33 0 26 chrX 125500000 125500512 -41149784 + L1Md_T LINE L1 6098 6582 0 1 1542 432 216 31 10 chrX 125500513 125500611 -41149685 + MT2A LTR ERVL 4 103 -430 2 1542 550 270 9 24 chrX 125500697 125500845 -41149451 + MT2A LTR ERVL 332 554 -47 2 1542 256 156 0 0 chrX 125500923 125500968 -41149328 + MT2A LTR ERVL 489 533 0 3 1542 852 312 103 15 chrX 125500968 125501375 -41148921 + Lx9 LINE L1 6976 7418 -226 4 1542 432 0 0 0 chrX 125501376 125501424 -41148872 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1542 31 26 0 0 chrX 125501492 125501530 -41148766 + AT_rich Low_complexity Low_complexity 1 38 0 6 1542 472 311 8 0 chrX 125501809 125501928 -41148368 + ID_B1 SINE B4 105 224 0 7 1542 25 31 0 0 chrX 125502219 125502251 -41148045 + AT_rich Low_complexity Low_complexity 1 32 0 8 1542 803 270 0 24 chrX 125502350 125502517 -41147779 - B3 SINE B2 -53 163 1 9 1542 198 0 0 0 chrX 125502525 125502547 -41147749 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 1542 21 0 0 0 chrX 125502597 125502618 -41147678 + AT_rich Low_complexity Low_complexity 1 21 0 1 1542 309 370 0 0 chrX 125502753 125502853 -41147443 + RSINE1 SINE B4 3 102 -63 1 1542 498 70 0 0 chrX 125502946 125503017 -41147279 + (CCA)n Simple_repeat Simple_repeat 1 71 0 1 1542 622 238 58 29 chrX 125503053 125503261 -41147035 + Lx3A LINE L1 4032 4245 -1635 1 1542 862 286 69 7 chrX 125503274 125503549 -41146747 + Lx8 LINE L1 6673 6964 -509 1 1542 983 298 49 15 chrX 125503552 125503879 -41146417 - ORR1E LTR MaLR -21 338 1 1 1542 767 263 14 40 chrX 125503883 125504105 -41146191 + B3 SINE B2 1 216 0 1 1542 981 268 31 40 chrX 125504137 125504460 -41145836 - ORR1E-int LTR MaLR 0 1370 1051 1 1542 306 0 0 0 chrX 125504461 125504495 -41145801 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 1 1542 5771 123 40 38 chrX 125504495 125505468 -41144828 - Lx3A LINE L1 -15 6966 5992 1 1542 4128 182 29 117 chrX 125505470 125505875 -41144421 + Lx3A LINE L1 4904 5322 -555 1 1542 252 257 14 54 chrX 125505875 125505949 -41144347 + RLTR25B LTR ERVK 428 498 -530 2 1542 650 138 0 0 chrX 125505896 125505990 -41144306 + B1_Mm SINE Alu 46 139 -8 2 1542 4128 182 29 117 chrX 125505990 125506019 -41144277 + Lx3A LINE L1 5323 5354 -523 1 1542 900 0 0 0 chrX 125506019 125506119 -41144177 + (GAA)n Simple_repeat Simple_repeat 3 102 0 2 1542 4128 138 12 44 chrX 125506119 125506727 -41143569 + Lx3A LINE L1 5355 5972 -1009 1 1542 1022 355 58 80 chrX 125506747 125507313 -41142983 - ORR1D-int LTR MaLR -321 1049 496 2 1542 1449 233 91 19 chrX 125507304 125507676 -41142620 + MTD LTR MaLR 21 419 0 2 1542 3987 151 134 38 chrX 125507721 125507937 -41142359 - RLTR13C1 LTR ERVK 0 983 718 2 1542 3582 79 2 6 chrX 125507937 125508457 -41141839 + L1_Mus1 LINE L1 6087 6567 0 2 1542 3987 151 134 38 chrX 125508457 125509100 -41141196 - RLTR13C1 LTR ERVK -266 717 42 2 1542 738 23 0 0 chrX 125509265 125509353 -41140943 + (TC)n Simple_repeat Simple_repeat 1 88 0 2 1542 647 294 53 10 chrX 125509487 125509693 -41140603 - ORR1D-int LTR MaLR -878 492 278 2 1542 477 0 0 0 chrX 125510091 125510144 -41140152 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 1542 23 54 0 0 chrX 125511023 125511060 -41139236 + AT_rich Low_complexity Low_complexity 1 37 0 2 1542 5624 148 28 32 chrX 125511555 125511895 -41138401 - L1_Mus3 LINE L1 -8 6630 6296 3 1542 1033 135 0 0 chrX 125511895 125512043 -41138253 - B1_Mus1 SINE Alu 0 148 1 3 1542 17410 131 18 24 chrX 125512043 125515368 -41134928 - L1_Mus3 LINE L1 -343 6295 2988 3 1542 3604 109 39 7 chrX 125515335 125515906 -41134390 - Lx3_Mus LINE L1 -384 6625 6037 3 1542 759 223 152 0 chrX 125516738 125516922 -41133374 - B3 SINE B2 -1 215 4 3 1542 2718 147 45 36 chrX 125517213 125517667 -41132629 - RLTR31_Mm LTR ERVK 0 561 100 3 1542 612 70 0 0 chrX 125517667 125517753 -41132543 + (TC)n Simple_repeat Simple_repeat 1 86 0 3 1542 2718 147 45 36 chrX 125517753 125517854 -41132442 - RLTR31_Mm LTR ERVK -462 99 1 3 1542 31 26 0 0 chrX 125517855 125517893 -41132403 + AT_rich Low_complexity Low_complexity 1 38 0 3 1542 1081 278 77 2 chrX 125518608 125519010 -41131286 - Lx6 LINE L1 -575 6885 6498 3 1542 21 0 0 0 chrX 125519502 125519523 -41130773 + AT_rich Low_complexity Low_complexity 1 21 0 3 1542 21 57 0 0 chrX 125519957 125519992 -41130304 + AT_rich Low_complexity Low_complexity 1 35 0 3 1542 545 304 97 10 chrX 125520004 125520524 -41129772 + L1MD LINE L1 2276 2835 -3311 4 1542 21 0 0 0 chrX 125520823 125520844 -41129452 + AT_rich Low_complexity Low_complexity 1 21 0 4 1542 435 293 121 0 chrX 125520884 125521000 -41129296 + RSINE1 SINE B4 1 130 -35 4 1542 351 0 0 0 chrX 125521029 125521068 -41129228 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1542 261 228 0 48 chrX 125521202 125521285 -41129011 + L1MD LINE L1 3938 4016 -2130 4 1542 366 230 165 38 chrX 125521813 125521971 -41128325 + L1M2 LINE L1 5448 5625 -675 4 1542 228 353 0 0 chrX 125522210 125522278 -41128018 + MLT1L LTR MaLR 182 249 -361 4 1542 24 0 0 0 chrX 125522301 125522325 -41127971 + AT_rich Low_complexity Low_complexity 1 24 0 4 1542 511 328 38 25 chrX 125522363 125522601 -41127695 + MLT1L LTR MaLR 368 608 -2 4 1542 749 321 101 17 chrX 125522808 125523154 -41127142 + MTEb LTR MaLR 5 379 0 4 1542 1389 318 78 13 chrX 125523154 125523689 -41126607 + MTEb-int LTR MaLR 1 570 -1010 4 1542 236 191 33 11 chrX 125524275 125524365 -41125931 + CT-rich Low_complexity Low_complexity 2 93 0 4 1542 6085 109 31 1 chrX 125525032 125526691 -41123605 + L1Md_F LINE L1 364 2075 -3808 4 1542 5177 67 0 5 chrX 125526697 125527368 -41122928 + L1Md_F2 LINE L1 5915 6582 0 5 1542 23 0 0 0 chrX 125527469 125527492 -41122804 + AT_rich Low_complexity Low_complexity 1 23 0 5 1542 1799 32 0 0 chrX 125528736 125528954 -41121342 + L1Md_A LINE L1 6364 6581 -1 5 1542 433 311 57 57 chrX 125529611 125529784 -41120512 + B3 SINE B2 6 178 -38 5 1542 1559 268 50 15 chrX 125529784 125530185 -41120111 - MTD LTR MaLR 0 419 5 5 1542 459 0 0 0 chrX 125530214 125530265 -41120031 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 1542 514 282 122 5 chrX 125530374 125530563 -41119733 - B3 SINE B2 -1 215 5 5 1542 1592 242 178 14 chrX 125530707 125531197 -41119099 + MT2B LTR ERVL 1 570 -31 5 1542 274 138 35 0 chrX 125531207 125531265 -41119031 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 1542 277 116 0 0 chrX 125531296 125531339 -41118957 + MT2B LTR ERVL 542 584 0 5 1542 28449 120 11 10 chrX 125532289 125535847 -41114449 - L1_Mus2 LINE L1 -1 6565 3006 5 1542 229 26 26 26 chrX 125535847 125535886 -41114410 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 1542 1085 109 0 0 chrX 125535892 125536039 -41114257 - B1_Mm SINE Alu 0 147 1 6 1542 28449 134 13 28 chrX 125536039 125538348 -41111948 - L1_Mus2 LINE L1 -2878 3005 724 5 1542 299 307 23 16 chrX 125538354 125538483 -41111813 - L1_Mus2 LINE L1 -5813 803 674 5 1542 355 261 6 140 chrX 125538572 125538750 -41111546 - L1VL1 LINE L1 -6027 395 242 6 1542 234 0 0 0 chrX 125539326 125539352 -41110944 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1542 315 214 141 14 chrX 125539485 125539627 -41110669 - MER53 DNA hAT -31 162 3 6 1542 260 326 11 0 chrX 125540386 125540481 -41109815 + MIR SINE MIR 137 232 -30 6 1542 220 200 28 14 chrX 125540568 125540639 -41109657 + (TTAA)n Simple_repeat Simple_repeat 4 75 0 6 1542 29 70 0 0 chrX 125540655 125540712 -41109584 + AT_rich Low_complexity Low_complexity 1 57 0 6 1542 232 277 15 0 chrX 125541326 125541391 -41108905 + RMER15 LTR ERVL 403 468 -107 6 1542 410 348 94 14 chrX 125543444 125543644 -41106652 - MTEa LTR MaLR 0 379 134 6 1542 516 240 157 20 chrX 125543645 125543849 -41106447 - RLTR21 LTR ERVK 0 1572 1341 7 1542 417 39 0 0 chrX 125543863 125543914 -41106382 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1542 4292 140 51 7 chrX 125543915 125544655 -41105641 - RMER12 LTR ERVK -549 773 1 7 1542 290 290 80 45 chrX 125544656 125544768 -41105528 - MTEa LTR MaLR -222 137 22 6 1542 23 33 0 0 chrX 125544864 125544894 -41105402 + AT_rich Low_complexity Low_complexity 1 30 0 7 1542 547 242 70 0 chrX 125545653 125545781 -41104515 - B1_Mur1 SINE Alu 0 149 13 7 1542 8258 159 32 7 chrX 125545783 125548114 -41102182 + Lx4A LINE L1 4660 7049 -9 7 1542 24 0 0 0 chrX 125548509 125548533 -41101763 + AT_rich Low_complexity Low_complexity 1 24 0 7 1542 1896 173 83 3 chrX 125548550 125548910 -41101386 - ORR1B1 LTR MaLR -5 389 1 7 1542 3457 127 28 23 chrX 125548997 125549130 -41101166 + Lx LINE L1 6086 6218 -436 7 1542 1297 45 101 6 chrX 125549130 125549308 -41100988 + B2_Mm2 SINE B2 1 195 0 7 1542 3457 127 28 23 chrX 125549308 125549740 -41100556 + Lx LINE L1 6219 6654 0 7 1542 22 70 0 0 chrX 125549849 125549892 -41100404 + AT_rich Low_complexity Low_complexity 1 43 0 8 1542 1160 197 89 4 chrX 125550272 125550600 -41099696 - ORR1C2 LTR MaLR -4 380 26 8 1542 2690 186 0 96 chrX 125550600 125550937 -41099359 + L1VL4 LINE L1 393 723 -5579 8 1542 1980 108 0 13 chrX 125550937 125551237 -41099059 - L1Md_F2 LINE L1 -11 6571 6276 8 1542 4339 119 5 20 chrX 125551237 125552078 -41098218 + L1VL4 LINE L1 724 1512 -2047 8 1542 872 134 85 0 chrX 125552068 125552232 -41098064 + L1_Mus3 LINE L1 3421 3598 -2285 8 1542 465 19 0 0 chrX 125552232 125552286 -41098010 + (GAAA)n Simple_repeat Simple_repeat 3 56 0 8 1542 962 175 9 0 chrX 125552292 125552594 -41097702 + GA-rich Low_complexity Low_complexity 1 304 0 8 1542 1132 55 7 0 chrX 125552594 125552739 -41097557 + B1_Mm SINE Alu 2 147 0 8 1542 13558 138 16 19 chrX 125552776 125554098 -41096198 + L1_Mus3 LINE L1 3573 4907 -976 8 1542 2161 146 110 38 chrX 125554098 125554194 -41096102 - RLTR9B2 LTR ERVK 0 420 327 8 1542 1032 45 0 0 chrX 125554194 125554328 -41095968 + (TTC)n Simple_repeat Simple_repeat 2 135 0 8 1542 279 0 0 0 chrX 125554329 125554360 -41095936 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 1542 1114 58 0 0 chrX 125554360 125554497 -41095799 - B1_Mus1 SINE Alu -9 139 3 9 1542 2161 146 110 38 chrX 125554497 125554789 -41095507 - RLTR9B2 LTR ERVK -94 326 2 8 1542 13558 138 16 19 chrX 125554789 125555146 -41095150 + L1_Mus3 LINE L1 4908 5257 -626 8 1542 1019 99 0 14 chrX 125555146 125555290 -41095006 + B1_Mus1 SINE Alu 1 142 -6 9 1542 209 57 0 28 chrX 125555292 125555328 -41094968 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 9 1542 13558 138 16 19 chrX 125555328 125555632 -41094664 + L1_Mus3 LINE L1 5258 5558 -325 8 1542 2152 151 37 104 chrX 125555632 125556149 -41094147 + RLTR45 LTR ERVK 1 482 0 9 1542 13558 110 6 1 chrX 125556149 125557226 -41093070 + L1_Mus3 LINE L1 5559 6635 -3 8 1542 195 42 0 0 chrX 125557436 125557460 -41092836 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 9 1542 1117 89 0 0 chrX 125557462 125557608 -41092688 - B1_Mus1 SINE Alu -2 146 1 9 1542 434 0 54 0 chrX 125557929 125557985 -41092311 + (CATAT)n Simple_repeat Simple_repeat 1 59 0 9 1542 630 316 10 45 chrX 125558660 125558688 -41091608 - B3A SINE B2 -4 194 172 9 1542 294 50 0 0 chrX 125558688 125558728 -41091568 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 1542 630 316 10 45 chrX 125558728 125558898 -41091398 - B3A SINE B2 -27 171 3 9 1542 182 341 96 29 chrX 125560210 125560346 -41089950 - MIRb SINE MIR -40 228 84 1 1542 3780 174 56 10 chrX 125560346 125561064 -41089232 + Lx4A LINE L1 5947 6697 -361 1 1542 23299 88 8 10 chrX 125561063 125564653 -41085643 - L1Md_F LINE L1 -1415 4468 900 1 1542 504 45 0 0 chrX 125564653 125564720 -41085576 + (GTTTG)n Simple_repeat Simple_repeat 4 70 0 1 1542 4392 127 69 82 chrX 125564720 125565209 -41085087 - L1Md_F LINE L1 -5717 899 398 1 1542 2405 103 14 33 chrX 125565209 125565570 -41084726 + IAPEY2_LTR LTR ERVK 1 354 -3 1 1542 4392 127 69 82 chrX 125565570 125565604 -41084692 - L1Md_F LINE L1 -6219 397 370 1 1542 306 0 0 0 chrX 125566016 125566050 -41084246 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1542 938 120 0 0 chrX 125566052 125566185 -41084111 - B1_Mm SINE Alu -14 133 1 1 192 2893 228 75 20 chrX 125566264 125567115 -41083181 - RMER1B Other Other -1 1065 138 1 1543 642 26 0 0 chrX 125567368 125567444 -41082852 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 1543 223 158 0 95 chrX 125568363 125568426 -41081870 + A-rich Low_complexity Low_complexity 1 57 0 1 1543 1957 269 47 75 chrX 125568774 125569480 -41080816 + Lx8 LINE L1 6391 7076 -397 1 1543 1644 182 28 19 chrX 125569480 125569805 -41080491 + Lx LINE L1 6321 6648 -6 1 1543 21 0 0 0 chrX 125570226 125570247 -41080049 + AT_rich Low_complexity Low_complexity 1 21 0 1 1543 806 355 101 0 chrX 125570480 125570728 -41079568 - B4A SINE B4 -11 281 9 1 1543 3104 163 86 50 chrX 125571269 125571908 -41078388 + L1VL2 LINE L1 63 724 -5611 1 1543 2574 62 3 0 chrX 125571908 125572245 -41078051 + ORR1A1 LTR MaLR 1 338 -8 1 1543 3166 72 40 80 chrX 125572246 125572964 -41077332 + L1VL2 LINE L1 717 1421 -2194 1 1543 6421 137 0 10 chrX 125572966 125573974 -41076322 + Lx LINE L1 5652 6649 -5 1 1543 23 68 0 0 chrX 125574165 125574209 -41076087 + AT_rich Low_complexity Low_complexity 1 44 0 1 1543 2320 80 65 0 chrX 125574221 125574557 -41075739 - L1Md_F2 LINE L1 0 6582 6225 1 1543 371 286 35 106 chrX 125574600 125574854 -41075442 + L1M2 LINE L1 3334 3569 -2574 1 1543 209 424 23 23 chrX 125575748 125575835 -41074461 - MIR SINE MIR -85 123 37 1 1543 393 22 0 0 chrX 125576212 125576258 -41074038 + (CACAA)n Simple_repeat Simple_repeat 4 49 0 1 1543 240 229 29 0 chrX 125576258 125576328 -41073968 + (CAGAGA)n Simple_repeat Simple_repeat 1 72 0 1 1543 414 39 0 0 chrX 125576335 125576387 -41073909 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1543 558 79 0 0 chrX 125576822 125576898 -41073398 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 1543 21 0 0 0 chrX 125576898 125576919 -41073377 + AT_rich Low_complexity Low_complexity 1 21 0 1 1543 360 0 0 0 chrX 125577000 125577040 -41073256 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1543 214 171 0 0 chrX 125577040 125577075 -41073221 + (CTA)n Simple_repeat Simple_repeat 1 35 0 1 1543 2554 147 32 19 chrX 125577075 125577162 -41073134 + Lx5 LINE L1 2061 2151 -3726 1 1543 1247 102 16 16 chrX 125577162 125577351 -41072945 + B2_Mm2 SINE B2 1 189 -6 1 1543 2554 147 32 19 chrX 125577351 125577729 -41072567 + Lx5 LINE L1 2152 2532 -3345 1 1543 5408 160 10 7 chrX 125577736 125578858 -41071438 + Lx5 LINE L1 4851 5982 -1068 1 1543 2732 107 5 2 chrX 125578860 125579254 -41071042 - L1_Mus3 LINE L1 0 6638 6244 1 1543 5059 198 37 12 chrX 125579258 125580295 -41070001 + Lx5 LINE L1 5986 7047 -3 1 1543 31 44 0 0 chrX 125580493 125580538 -41069758 + AT_rich Low_complexity Low_complexity 1 45 0 1 1543 314 255 104 58 chrX 125580616 125580770 -41069526 + RMER15 LTR ERVL 1 161 -414 1 1543 532 299 119 14 chrX 125580834 125581044 -41069252 + RMER15 LTR ERVL 344 575 0 1 1543 776 316 10 5 chrX 125581910 125582117 -41068179 - B3 SINE B2 0 216 9 1 1543 4945 127 19 93 chrX 125582548 125583179 -41067117 + RLTR13D6 LTR ERVK 1 595 -307 1 1543 3454 13 13 0 chrX 125583179 125583570 -41066726 + MTA_Mm LTR MaLR 1 396 0 1 1543 4945 127 19 93 chrX 125583570 125583912 -41066384 + RLTR13D6 LTR ERVK 596 902 0 1 1543 22 0 0 0 chrX 125584065 125584087 -41066209 + AT_rich Low_complexity Low_complexity 1 22 0 1 1543 21 36 0 0 chrX 125584332 125584360 -41065936 + AT_rich Low_complexity Low_complexity 1 28 0 1 1543 292 230 61 45 chrX 125584551 125584683 -41065613 - L1M2 LINE L1 -1098 5045 4912 1 1543 1441 220 121 150 chrX 125585112 125585572 -41064724 - RMER6D LTR ERVK 0 720 323 1 1543 5757 70 4 14 chrX 125585572 125585785 -41064511 - L1Md_F2 LINE L1 -1 6581 6378 1 1543 1432 137 48 75 chrX 125585785 125586116 -41064180 - RLTRETN_Mm LTR ERVK 0 322 1 1 1543 5757 70 4 14 chrX 125586116 125586688 -41063608 - L1Md_F2 LINE L1 -205 6377 5804 1 1543 1441 220 121 150 chrX 125586688 125586960 -41063336 - RMER6D LTR ERVK -398 322 9 1 1543 1543 101 13 17 chrX 125586971 125586994 -41063302 + LTRIS2 LTR ERV1 1 23 -541 1 1543 225 0 0 0 chrX 125586994 125587019 -41063277 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 1543 1543 101 13 17 chrX 125587019 125587226 -41063070 + LTRIS2 LTR ERV1 24 230 -334 1 1543 216 67 0 0 chrX 125587646 125587676 -41062620 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 1543 480 326 10 51 chrX 125587949 125588146 -41062150 - B3 SINE B2 -8 208 20 1 1543 257 324 0 0 chrX 125588394 125588462 -41061834 + ID4_ SINE ID 5 72 -11 1 1543 318 80 0 0 chrX 125588462 125588512 -41061784 + (CATA)n Simple_repeat Simple_repeat 2 51 0 1 1543 312 148 0 0 chrX 125588783 125588844 -41061452 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1543 321 387 17 6 chrX 125589086 125589295 -41061001 - L1M2 LINE L1 -2237 3906 3697 1 1543 271 312 36 18 chrX 125589314 125589425 -41060871 + MER5B DNA MER1_type 63 175 -3 1 1543 416 19 0 19 chrX 125589431 125589485 -41060811 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1543 389 299 154 34 chrX 125589996 125590020 -41060276 + RMER5 LTR ERV1 229 252 -282 1 1543 1487 204 21 18 chrX 125590020 125590354 -41059942 + Lx LINE L1 6317 6651 -3 1 1543 389 299 154 34 chrX 125590354 125590537 -41059759 + RMER5 LTR ERV1 253 461 -73 1 1543 6241 206 76 16 chrX 125590950 125591086 -41059210 - Lx5 LINE L1 -3 7047 6884 1 1543 1012 16 16 0 chrX 125591086 125591212 -41059084 + (CCCTAA)n Simple_repeat Simple_repeat 4 131 0 1 1543 15044 193 51 28 chrX 125591212 125593373 -41056923 - Lx5 LINE L1 -167 6883 4624 1 1543 186 43 0 0 chrX 125593373 125593396 -41056900 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1 1543 15044 182 31 38 chrX 125593396 125595500 -41054796 - Lx5 LINE L1 -1254 4623 2599 1 1543 186 43 0 0 chrX 125595505 125595528 -41054768 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1543 470 219 0 30 chrX 125595532 125595631 -41054665 - B1_Mur3 SINE Alu -5 144 49 1 1543 1076 67 13 0 chrX 125595632 125595781 -41054515 + (TTTC)n Simple_repeat Simple_repeat 2 152 0 1 1543 315 184 0 0 chrX 125595871 125595920 -41054376 - B1_Mur4 SINE Alu -98 52 4 1 1543 588 62 0 0 chrX 125596119 125596200 -41054096 + (CA)n Simple_repeat Simple_repeat 1 81 0 1 1543 332 258 63 86 chrX 125596657 125596831 -41053465 + MER34 LTR ERV1 293 462 -80 1 1543 22 0 0 0 chrX 125597435 125597457 -41052839 + AT_rich Low_complexity Low_complexity 1 22 0 1 1543 574 186 38 30 chrX 125598286 125598419 -41051877 + BGLII_B LTR ERVK 1 134 -307 1 1543 563 253 12 37 chrX 125598391 125598555 -41051741 - RLTR16 LTR ERVK -323 182 23 1 1543 921 167 76 0 chrX 125598565 125598775 -41051521 + MYSERV16_I-int LTR ERVK 2099 2324 -2 1 1543 661 154 0 0 chrX 125598777 125598881 -41051415 + BGLII_B LTR ERVK 1 104 -337 1 1543 777 235 51 10 chrX 125598956 125599233 -41051063 + MYSERV16_I-int LTR ERVK 277 544 -1782 1 1543 3651 199 96 54 chrX 125599244 125600705 -41049591 + MYSERV16_I-int LTR ERVK 639 2610 -232 1 1543 687 297 47 66 chrX 125600764 125601127 -41049169 + RLTR16 LTR ERVK 24 435 -257 1 1543 248 202 20 110 chrX 125602321 125602421 -41047875 + MER5A1 DNA MER1_type 47 137 -29 1 1543 29753 23 0 0 chrX 125602706 125606213 -41044083 + L1Md_T LINE L1 2079 5586 -297 1 1543 7972 56 0 0 chrX 125606213 125607208 -41043088 + L1Md_T LINE L1 5587 6581 -1 1 1543 490 128 24 57 chrX 125607643 125607767 -41042529 + Lx3A LINE L1 6852 6971 -10 1 1543 533 15 15 0 chrX 125607767 125607833 -41042463 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 1 1543 237 246 53 40 chrX 125608410 125608486 -41041810 + MIRb SINE MIR 44 120 -148 1 1543 284 262 131 0 chrX 125609231 125609315 -41040981 + L2c LINE L2 3276 3370 -17 1 1543 412 287 41 20 chrX 125610177 125610323 -41039973 - B1F SINE Alu 0 149 1 1 1543 198 320 25 51 chrX 125610743 125610822 -41039474 + L2 LINE L2 223 299 -3120 1 1543 236 318 24 0 chrX 125611236 125611321 -41038975 + PB1D10 SINE Alu 28 114 -3 1 1543 1633 246 39 50 chrX 125612286 125612704 -41037592 - MTD LTR MaLR -15 404 5 1 1543 526 320 60 48 chrX 125612799 125613068 -41037228 + Tigger5 DNA MER2_type 39 310 -2096 1 1543 709 278 35 15 chrX 125613080 125613277 -41037019 + Tigger5 DNA MER2_type 2197 2397 -9 1 1543 3675 127 106 154 chrX 125613582 125614558 -41035738 + RLTR13B3 LTR ERVK 1 929 0 1 1543 30 59 0 0 chrX 125615095 125615146 -41035150 + AT_rich Low_complexity Low_complexity 1 51 0 1 1543 644 271 33 90 chrX 125615482 125615693 -41034603 + B3A SINE B2 5 203 -13 1 1543 189 94 0 0 chrX 125615693 125615725 -41034571 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1543 1509 214 6 19 chrX 125615852 125616175 -41034121 + Lx7 LINE L1 7000 7318 -378 1 1543 2568 156 2 5 chrX 125616232 125616671 -41033625 - L1_Mm LINE L1 -571 5312 4875 1 1543 1372 224 138 17 chrX 125616671 125617001 -41033295 + RLTR20C LTR ERVK 65 432 -102 1 1543 396 0 0 0 chrX 125617001 125617045 -41033251 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1543 1372 224 138 17 chrX 125617045 125617128 -41033168 + RLTR20C LTR ERVK 433 527 -7 1 1543 270 115 0 0 chrX 125617297 125617349 -41032947 + (T)n Simple_repeat Simple_repeat 1 52 0 1 1543 22 56 0 0 chrX 125617421 125617457 -41032839 + AT_rich Low_complexity Low_complexity 1 36 0 1 1543 26 30 0 0 chrX 125617674 125617707 -41032589 + AT_rich Low_complexity Low_complexity 1 33 0 1 1543 220 214 21 43 chrX 125617804 125617897 -41032399 + A-rich Low_complexity Low_complexity 5 95 0 1 1543 25 90 0 0 chrX 125618004 125618071 -41032225 + AT_rich Low_complexity Low_complexity 1 67 0 1 1543 4238 149 60 5 chrX 125618567 125619338 -41030958 + RLTR22_Mur LTR ERVK 1 813 -1035 1 1543 361 347 47 61 chrX 125619541 125619753 -41030543 + RMER12 LTR ERVK 1108 1316 -6 1 1543 253 254 18 0 chrX 125619756 125619811 -41030485 + RMER15-int LTR ERVL 4176 4231 -768 1 1543 761 306 82 19 chrX 125619816 125620086 -41030210 + Lx8 LINE L1 6327 6613 -860 1 1543 1336 296 101 32 chrX 125620102 125620608 -41029688 + Lx8 LINE L1 6735 7275 -198 1 1543 307 234 84 2 chrX 125621331 125621450 -41028846 + L1MD3 LINE L1 7472 7690 -305 1 1543 816 256 59 5 chrX 125621451 125621655 -41028641 + B3 SINE B2 2 216 0 1 1543 8012 113 28 7 chrX 125621749 125623162 -41027134 + Lx3A LINE L1 5448 6892 -89 1 1543 372 22 0 0 chrX 125623194 125623239 -41027057 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2 1543 32 43 0 0 chrX 125623456 125623502 -41026794 + AT_rich Low_complexity Low_complexity 1 46 0 2 1543 23 78 0 0 chrX 125623895 125623946 -41026350 + AT_rich Low_complexity Low_complexity 1 51 0 2 1543 230 216 20 0 chrX 125624348 125624399 -41025897 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1543 275 312 97 10 chrX 125624424 125624571 -41025725 - MIR SINE MIR -107 161 1 2 1543 270 326 36 0 chrX 125624817 125624916 -41025380 + MLT1A0 LTR MaLR 95 197 -211 2 1543 373 326 38 22 chrX 125625010 125625195 -41025101 - B3A SINE B2 -9 189 2 2 1543 7489 54 0 2 chrX 125626313 125627236 -41023060 - L1Md_F2 LINE L1 -13 6569 5649 2 1543 2480 199 66 11 chrX 125627842 125628467 -41021829 + Lx9 LINE L1 6965 7644 0 2 1543 416 104 15 0 chrX 125628485 125628552 -41021744 + (TA)n Simple_repeat Simple_repeat 1 68 0 2 1543 196 77 51 0 chrX 125628557 125628596 -41021700 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1543 446 279 114 8 chrX 125628612 125628735 -41021561 - RSINE1 SINE B4 -19 146 11 2 1543 261 289 118 32 chrX 125629034 125629127 -41021169 + LTR68 LTR ERV1 47 147 -593 2 1543 211 114 68 0 chrX 125629251 125629295 -41021001 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 1543 180 0 0 0 chrX 125629297 125629317 -41020979 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 1543 1174 80 0 22 chrX 125629386 125629566 -41020730 + L1_Mus4 LINE L1 6454 6629 -7 2 1543 4341 155 18 1 chrX 125629733 125630439 -41019857 + RMER19A LTR ERVK 1 718 -19 2 1543 3932 100 9 5 chrX 125630439 125631010 -41019286 + L1_Mus3 LINE L1 6056 6628 -10 2 1543 291 340 19 19 chrX 125631336 125631444 -41018852 + LTR68 LTR ERV1 608 715 -25 2 1543 341 210 16 0 chrX 125631527 125631589 -41018707 + ID_B1 SINE B4 160 222 -2 2 1543 351 105 0 0 chrX 125631631 125631688 -41018608 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1543 728 284 70 60 chrX 125634180 125634465 -41015831 + MTEa LTR MaLR 1 293 -86 2 1543 494 303 0 15 chrX 125634453 125634587 -41015709 + MTEa LTR MaLR 247 378 -1 2 1543 468 77 0 0 chrX 125634947 125635012 -41015284 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 1543 432 383 48 16 chrX 125635099 125635412 -41014884 - Lx8 LINE L1 -320 7153 6831 2 1543 4985 134 7 17 chrX 125635815 125636627 -41013669 + Lx2 LINE L1 5587 6390 -607 2 1543 2287 117 75 26 chrX 125636637 125637023 -41013273 - RLTR44A LTR ERVK 0 405 1 2 1543 1274 169 76 98 chrX 125637023 125637418 -41012878 - RMER17C LTR ERVK -9 401 14 2 1543 2260 145 180 21 chrX 125637427 125638036 -41012260 - RMER17C-int LTR ERVK 0 3238 2533 2 1543 726 199 26 0 chrX 125638031 125638182 -41012114 - RMER17C-int LTR ERVK -893 2345 2191 2 1543 888 198 189 30 chrX 125638186 125638601 -41011695 - RMER17C-int LTR ERVK -1250 1988 1508 2 1543 270 0 0 0 chrX 125638700 125638730 -41011566 + (T)n Simple_repeat Simple_repeat 1 30 0 2 1543 6790 58 0 7 chrX 125639259 125640121 -41010175 + L1Md_F2 LINE L1 5727 6582 0 2 1543 1094 174 0 5 chrX 125640724 125640932 -41009364 + Lx2 LINE L1 6790 6996 -1 2 1543 264 250 36 63 chrX 125641279 125641390 -41008906 - MERVL_2A-int LTR ERVL -5653 108 1 2 1543 1085 310 35 54 chrX 125641494 125641917 -41008379 - MT2A LTR ERVL -113 420 6 2 1543 252 399 95 0 chrX 125642001 125642159 -41008137 + MLT1E1A LTR MaLR 381 553 -127 2 1543 289 294 52 63 chrX 125642514 125642688 -41007608 + L1MA6 LINE L1 5878 6049 -251 2 1543 367 370 0 0 chrX 125642690 125642798 -41007498 + PB1D10 SINE Alu 1 108 -9 2 1543 343 240 107 0 chrX 125642935 125643056 -41007240 + L1MA6 LINE L1 6043 6176 -124 2 1543 233 274 60 45 chrX 125643231 125643365 -41006931 + L1MA6 LINE L1 6165 6300 0 2 1543 6152 192 25 5 chrX 125643390 125644652 -41005644 + L1_Mur2 LINE L1 4153 5439 -438 2 1543 1873 44 0 0 chrX 125644652 125644878 -41005418 + L1Md_T LINE L1 6357 6582 0 2 1543 5939 197 24 53 chrX 125644878 125644894 -41005402 + L1_Mur2 LINE L1 5438 5438 -442 2 1543 3451 137 25 24 chrX 125644894 125645491 -41004805 + Lx3A LINE L1 6375 6972 -9 2 1543 5939 197 24 53 chrX 125645491 125645651 -41004645 + L1_Mur2 LINE L1 5438 5550 -330 2 1543 1206 276 14 85 chrX 125645662 125646026 -41004270 + Lx5 LINE L1 6507 6844 -206 2 1543 226 211 68 27 chrX 125646027 125646100 -41004196 - RLTR9E LTR ERVK 0 409 334 2 1543 14200 47 3 1 chrX 125646100 125647896 -41002400 - L1_Mm LINE L1 -972 4911 3112 2 1543 395 282 66 60 chrX 125647896 125648062 -41002234 - RLTR9E LTR ERVK -57 352 186 2 1543 359 245 0 152 chrX 125648054 125648179 -41002117 - RLTRETN_Mm LTR ERVK -216 106 1 2 1543 562 321 54 11 chrX 125648179 125648365 -41001931 + Lx5 LINE L1 6840 7033 -17 2 1543 964 95 6 16 chrX 125648471 125648653 -41001643 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 2 1543 1532 159 6 137 chrX 125648676 125649033 -41001263 - ORR1A3 LTR MaLR -8 318 9 2 1543 300 405 74 61 chrX 125649229 125649608 -41000688 - LTR16D1 LTR ERVL -23 652 269 2 1543 318 87 0 0 chrX 125650274 125650320 -40999976 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1543 253 329 36 12 chrX 125650349 125650432 -40999864 + B1F SINE Alu 9 93 -56 2 1543 294 342 8 33 chrX 125651160 125651281 -40999015 + B2_Mm2 SINE B2 1 118 -77 2 1543 369 0 0 0 chrX 125651317 125651358 -40998938 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1543 21 71 0 0 chrX 125651360 125651402 -40998894 + AT_rich Low_complexity Low_complexity 1 42 0 2 1543 328 309 19 39 chrX 125651555 125651710 -40998586 - MIRb SINE MIR -28 240 89 2 1543 28 0 0 0 chrX 125651747 125651775 -40998521 + AT_rich Low_complexity Low_complexity 1 28 0 2 1543 423 38 0 0 chrX 125652532 125652585 -40997711 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1543 1134 147 0 0 chrX 125652829 125653013 -40997283 + L1_Mm LINE L1 5069 5252 -631 2 1543 556 108 0 0 chrX 125653013 125653087 -40997209 + L1_Mus2 LINE L1 6328 6401 -165 2 1543 5181 71 3 4 chrX 125653088 125653771 -40996525 + L1_Mus2 LINE L1 5885 6566 0 2 1543 21 0 0 0 chrX 125653793 125653814 -40996482 + AT_rich Low_complexity Low_complexity 1 21 0 2 1543 2650 159 20 5 chrX 125655227 125655674 -40994622 + MERVL_2A-int LTR ERVL 1144 1597 -4164 2 1543 731 188 0 35 chrX 125655672 125655815 -40994481 + MERVL_2A-int LTR ERVL 1978 2115 -3646 2 1543 732 272 61 5 chrX 125655815 125656011 -40994285 + B3 SINE B2 1 207 -9 2 1543 508 269 288 0 chrX 125656111 125656271 -40994025 + MT2A LTR ERVL 243 448 -85 2 1543 572 91 0 11 chrX 125656276 125656365 -40993931 + (TA)n Simple_repeat Simple_repeat 2 89 0 2 1543 287 262 65 9 chrX 125656533 125656641 -40993655 - PB1D10 SINE Alu 0 117 4 2 1543 387 0 0 0 chrX 125656643 125656686 -40993610 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2 1543 1514 257 21 45 chrX 125656732 125657107 -40993189 - ORR1D1 LTR MaLR 0 374 9 2 1543 317 338 0 24 chrX 125657264 125657387 -40992909 - PB1D7 SINE Alu 0 120 1 2 1543 271 303 53 53 chrX 125657825 125657975 -40992321 - MIRc SINE MIR -12 256 104 2 1543 261 182 0 0 chrX 125658029 125658084 -40992212 + CT-rich Low_complexity Low_complexity 2 56 0 2 1543 328 321 27 0 chrX 125658297 125658409 -40991887 - Arthur1A DNA Tip100 -35 142 28 2 1543 1268 243 123 148 chrX 125659026 125659653 -40990643 - RMER19C LTR ERVK 0 611 1 2 1543 776 293 118 14 chrX 125660265 125660621 -40989675 - MARNA DNA Mariner -13 573 181 2 1543 267 321 111 15 chrX 125661088 125661252 -40989044 - MIRb SINE MIR -94 168 3 2 1543 264 333 163 6 chrX 125661274 125661446 -40988850 - L2a LINE L2 0 3426 3228 2 1543 3452 115 45 11 chrX 125661593 125662131 -40988165 + Lx LINE L1 6006 6561 -93 2 1543 295 297 55 0 chrX 125662206 125662297 -40987999 - PB1D10 SINE Alu 0 117 22 2 1543 336 135 0 0 chrX 125662301 125662375 -40987921 + (A)n Simple_repeat Simple_repeat 1 74 0 2 1543 366 318 0 78 chrX 125662426 125662542 -40987754 + RSINE1 SINE B4 2 108 -57 2 1543 432 0 0 0 chrX 125662552 125662600 -40987696 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1543 297 0 0 0 chrX 125662676 125662709 -40987587 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1543 6971 102 31 7 chrX 125662710 125664059 -40986237 - L1_Mus3 LINE L1 -3 6635 5263 2 1543 279 383 0 0 chrX 125664544 125664625 -40985671 + B3A SINE B2 58 138 -60 2 1543 238 249 126 84 chrX 125664775 125665227 -40985069 + L1MC5 LINE L1 7305 7775 -186 2 1543 414 370 98 4 chrX 125665536 125665761 -40984535 - L3 LINE CR1 -498 3991 3746 2 1543 934 132 0 34 chrX 125665888 125666037 -40984259 - B1_Mur4 SINE Alu -4 146 3 2 1543 837 322 90 64 chrX 125667160 125667321 -40982975 + Lx7 LINE L1 1259 1442 -4438 2 1543 375 23 0 0 chrX 125667321 125667365 -40982931 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 1543 837 322 90 64 chrX 125667365 125667957 -40982339 + Lx7 LINE L1 1443 2066 -3814 2 1543 189 74 0 0 chrX 125667957 125667984 -40982312 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 2 1543 837 322 90 64 chrX 125667984 125668070 -40982226 + Lx7 LINE L1 2067 2152 -3728 2 1543 580 322 23 0 chrX 125668070 125668247 -40982049 + B3A SINE B2 2 182 -16 2 1543 837 322 90 64 chrX 125668247 125668519 -40981777 + Lx7 LINE L1 2153 2400 -3480 2 1543 631 270 53 8 chrX 125668537 125668771 -40981525 + Lx4B LINE L1 6782 7054 -4 2 1543 1869 174 70 8 chrX 125668871 125669241 -40981055 - ORR1B1 LTR MaLR 0 394 2 2 1543 937 281 45 76 chrX 125669245 125669784 -40980512 + Lx7 LINE L1 2432 2953 -2927 2 1543 324 0 0 0 chrX 125669862 125669898 -40980398 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2 1543 733 284 71 15 chrX 125669901 125670098 -40980198 - B3 SINE B2 -6 210 3 2 1543 193 29 0 56 chrX 125670269 125670305 -40979991 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1543 258 316 34 8 chrX 125670329 125670382 -40979914 - Lx7 LINE L1 -421 7275 7220 2 1543 226 0 0 56 chrX 125670382 125670418 -40979878 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1543 258 316 34 8 chrX 125670418 125670482 -40979814 - Lx7 LINE L1 -477 7219 7155 2 1543 248 261 29 0 chrX 125670547 125670616 -40979680 + Lx7 LINE L1 7039 7109 -587 2 1543 265 189 57 0 chrX 125670756 125670809 -40979487 - L1_Mm LINE L1 -1086 4797 4742 2 1543 6497 125 55 5 chrX 125670826 125671836 -40978460 + Lx LINE L1 5591 6650 -4 2 1543 403 270 97 21 chrX 125671825 125672063 -40978233 + L1_Rod LINE L1 3114 3369 -2478 2 1543 1209 279 184 71 chrX 125672085 125673022 -40977274 + Lx7 LINE L1 3512 4537 -1343 2 1543 2017 196 29 17 chrX 125673022 125673438 -40976858 - MTC LTR MaLR 0 421 1 2 1543 1209 281 177 67 chrX 125673438 125673838 -40976458 + Lx7 LINE L1 4538 5028 -1112 2 1543 1799 244 35 41 chrX 125673874 125674415 -40975881 - RLTR20B3 LTR ERVK -1 576 30 2 1543 1717 271 71 42 chrX 125674439 125675236 -40975060 + Lx7 LINE L1 5045 5913 -1783 2 1543 1523 231 83 10 chrX 125675307 125675692 -40974604 + MTD LTR MaLR 5 417 -2 2 1543 304 270 68 3 chrX 125675695 125675821 -40974475 + MTD-int LTR MaLR 2 141 -1368 2 1543 2143 141 75 93 chrX 125675846 125676466 -40973830 + L1VL4 LINE L1 421 1025 -2534 2 1543 493 228 119 132 chrX 125676472 125676715 -40973581 + MTD-int LTR MaLR 58 297 -961 2 1543 6219 131 13 7 chrX 125676832 125677828 -40972468 - Lx3A LINE L1 -8 6973 5972 3 1543 2216 57 30 20 chrX 125677845 125678149 -40972147 - IAPLTR2b LTR ERVK -20 307 1 3 1543 4449 82 3 4 chrX 125678149 125678853 -40971443 - Lx3A LINE L1 -1004 5977 5278 3 1543 806 186 299 107 chrX 125678853 125678946 -40971350 - RMER6C LTR ERVK -101 589 501 3 1543 355 0 0 57 chrX 125678946 125678999 -40971297 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 3 1543 806 186 299 107 chrX 125678999 125679380 -40970916 - RMER6C LTR ERVK -190 500 24 3 1543 1315 122 0 45 chrX 125679429 125679652 -40970644 - RMER6-int LTR ERVK -314 2863 2651 3 1543 774 258 61 30 chrX 125679652 125679980 -40970316 + L1_Rod LINE L1 3160 3497 -2350 3 1543 2824 36 0 3 chrX 125680048 125680386 -40969910 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1543 55631 21 15 5 chrX 125680386 125686799 -40963497 - IAPEz-int LTR ERVK 0 6481 8 3 1543 2824 36 0 3 chrX 125686799 125687137 -40963159 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1543 1261 303 52 23 chrX 125687153 125687767 -40962529 + L1M2 LINE L1 4693 5324 -819 3 1543 934 132 0 34 chrX 125687984 125688133 -40962163 + B1_Mur4 SINE Alu 3 146 -4 3 1543 409 208 26 0 chrX 125688176 125688253 -40962043 + Lx8 LINE L1 7163 7241 -232 3 1543 334 307 106 25 chrX 125688270 125688660 -40961636 - L1MC LINE L1 -2370 3776 3354 3 1543 540 142 46 67 chrX 125688909 125689058 -40961238 - B1_Mur3 SINE Alu -7 143 2 3 1543 307 256 253 13 chrX 125689059 125689213 -40961083 + Lx8 LINE L1 7277 7467 -6 3 1543 2197 249 116 123 chrX 125689486 125690332 -40959964 - RMER1B Other Other -16 1050 198 3 1543 1895 151 26 50 chrX 125690332 125690751 -40959545 + RLTR9E LTR ERVK 1 409 0 3 1543 2197 249 116 123 chrX 125690751 125690910 -40959386 - RMER1B Other Other -869 197 52 3 1543 678 120 14 14 chrX 125691430 125691574 -40958722 + (CTTTG)n Simple_repeat Simple_repeat 1 144 0 3 1543 789 11 0 0 chrX 125692100 125692190 -40958106 + (CA)n Simple_repeat Simple_repeat 1 90 0 3 1543 405 0 0 0 chrX 125692190 125692234 -40958062 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 1543 369 109 0 0 chrX 125692234 125692289 -40958007 + (GA)n Simple_repeat Simple_repeat 1 55 0 3 1543 3211 159 11 4 chrX 125692584 125693132 -40957164 + Lx LINE L1 6088 6639 -15 3 1543 1297 101 5 0 chrX 125693132 125693320 -40956976 + B2_Mm1t SINE B2 2 190 -3 3 1543 3211 159 11 4 chrX 125693320 125693332 -40956964 + Lx LINE L1 6640 6651 -3 3 1543 243 88 0 0 chrX 125693394 125693428 -40956868 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1543 601 278 24 0 chrX 125694915 125695041 -40955255 + ID_B1 SINE B4 81 209 -15 3 1543 492 105 0 0 chrX 125695135 125695211 -40955085 + (TA)n Simple_repeat Simple_repeat 2 77 0 3 1543 187 383 44 48 chrX 125695604 125695810 -40954486 - L2 LINE L2 -979 2440 2236 3 1543 296 268 24 24 chrX 125696070 125696154 -40954142 + B1F1 SINE Alu 3 86 -63 3 1543 1028 298 81 12 chrX 125696814 125697134 -40953162 - ORR1E LTR MaLR -17 342 1 3 1543 301 320 89 16 chrX 125697723 125697847 -40952449 - B1F SINE Alu -7 142 10 3 1544 364 316 65 13 chrX 125698084 125698238 -40952058 + RSINE1 SINE B4 4 165 0 3 1544 302 302 151 0 chrX 125698289 125698428 -40951868 - L1M5 LINE L1 -293 5831 5672 3 1544 331 347 20 13 chrX 125698867 125699019 -40951277 + L1MEe LINE L1 919 1071 -3783 3 1544 307 321 65 9 chrX 125699237 125699344 -40950952 - MER20 DNA MER1_type 0 219 107 3 1544 249 151 0 0 chrX 125699575 125699628 -40950668 + (CAAA)n Simple_repeat Simple_repeat 1 53 0 3 1544 313 331 8 75 chrX 125699974 125700108 -40950188 + MLT1A LTR MaLR 9 133 -241 3 1544 494 362 27 22 chrX 125700112 125700335 -40949961 + MER58A DNA MER1_type 1 224 0 3 1544 459 248 8 25 chrX 125700438 125700558 -40949738 - MLT1A1 LTR MaLR 0 408 291 3 1544 278 342 0 75 chrX 125700610 125700720 -40949576 - MLT1A1 LTR MaLR -241 133 33 3 1544 3255 163 113 13 chrX 125700720 125701406 -40948890 + RMER6A LTR ERVK 1 722 -34 3 1544 735 267 93 57 chrX 125701477 125701811 -40948485 + MLT1A0 LTR MaLR 4 349 -16 3 1544 289 290 87 24 chrX 125701997 125702124 -40948172 - MER95 LTR ERV -64 367 233 3 1544 414 127 0 0 chrX 125702124 125702195 -40948101 + (TTTA)n Simple_repeat Simple_repeat 2 72 0 3 1544 1075 296 59 48 chrX 125702786 125703141 -40947155 - ORR1E LTR MaLR 0 359 1 3 1544 1580 243 3 9 chrX 125703141 125703462 -40946834 - ORR1E-int LTR MaLR -53 1527 1209 3 1544 420 40 79 0 chrX 125703462 125703538 -40946758 + (TAGA)n Simple_repeat Simple_repeat 1 82 0 3 1544 417 302 104 57 chrX 125703651 125703982 -40946314 - MLT1A LTR MaLR 0 390 34 3 1544 194 98 0 47 chrX 125704095 125704128 -40946168 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 3 1544 1157 88 0 0 chrX 125704128 125704275 -40946021 - B1_Mus2 SINE Alu 0 147 1 3 1544 194 98 0 47 chrX 125704275 125704284 -40946012 + (TTTTTG)n Simple_repeat Simple_repeat 6 14 0 3 1544 495 0 0 0 chrX 125704289 125704344 -40945952 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1544 1627 254 58 12 chrX 125707499 125707926 -40942370 - Lx7 LINE L1 -498 7198 6752 3 1544 2792 239 59 20 chrX 125707950 125708662 -40941634 - Lx7 LINE L1 -1101 6595 5856 3 1544 1952 216 158 46 chrX 125708679 125709455 -40940841 + RMER6C LTR ERVK 1 715 -5 3 1544 1614 220 13 55 chrX 125709462 125709494 -40940802 - Lx7 LINE L1 -73 5807 5778 3 1544 1041 144 0 11 chrX 125709494 125709676 -40940620 - Lx2 LINE L1 -1 6996 6817 3 1544 1614 220 13 55 chrX 125709676 125710027 -40940269 - Lx7 LINE L1 -103 5777 5440 3 1544 31679 126 30 28 chrX 125710028 125716338 -40933958 - L1_Mus1 LINE L1 -1 6565 260 3 1544 8862 180 49 14 chrX 125716374 125718268 -40932028 - Lx7 LINE L1 -430 5450 3490 3 1544 1786 184 71 54 chrX 125718266 125718730 -40931566 + Lx7 LINE L1 7225 7696 0 3 1544 204 135 0 0 chrX 125719851 125719888 -40930408 + (TAA)n Simple_repeat Simple_repeat 3 39 0 3 1544 34 0 0 0 chrX 125720107 125720141 -40930155 + AT_rich Low_complexity Low_complexity 1 34 0 3 1544 5191 129 1 11 chrX 125720180 125720964 -40929332 + Lx LINE L1 5874 6649 -5 3 1544 683 266 37 27 chrX 125721008 125721346 -40928950 + L1M4 LINE L1 5004 5357 -789 3 1544 249 312 16 0 chrX 125721398 125721462 -40928834 - Tigger7 DNA MER2_type -1 2490 2426 3 1544 270 0 0 0 chrX 125721488 125721518 -40928778 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1544 463 352 77 36 chrX 125721724 125721998 -40928298 + RMER15 LTR ERVL 275 559 -16 3 1544 2127 197 43 31 chrX 125722165 125722681 -40927615 + RLTR26 LTR ERVK 1 546 -96 3 1544 674 221 14 21 chrX 125722676 125722819 -40927477 + RLTR26 LTR ERVK 501 642 0 3 1544 598 262 22 65 chrX 125722857 125723041 -40927255 - RMER30 DNA MER1_type -23 179 4 3 1544 658 295 94 32 chrX 125723042 125723319 -40926977 - Lx8 LINE L1 -1115 6358 6065 3 1544 1722 211 19 10 chrX 125723416 125723789 -40926507 + ORR1B2 LTR MaLR 19 394 0 3 1544 1450 259 286 57 chrX 125723794 125724210 -40926086 - Lx7 LINE L1 -1818 5878 5369 3 1544 735 170 235 6 chrX 125724210 125724393 -40925903 - URR1B DNA MER1_type 0 225 1 3 1544 1450 322 26 30 chrX 125724393 125724888 -40925408 - Lx7 LINE L1 -512 5368 4874 3 1544 239 114 0 22 chrX 125724964 125725009 -40925287 + (CAA)n Simple_repeat Simple_repeat 2 45 0 3 1544 2316 174 16 18 chrX 125725142 125725593 -40924703 + Lx LINE L1 6205 6654 0 3 1544 6172 148 2 8 chrX 125725597 125726669 -40923627 - L1_Mur2 LINE L1 -1633 4244 3180 3 1544 1189 179 31 0 chrX 125726671 125726895 -40923401 + Lx LINE L1 6419 6649 -5 3 1544 1696 328 73 24 chrX 125726926 125727745 -40922551 + Lx8 LINE L1 6615 7473 0 3 1544 304 185 30 30 chrX 125728126 125728140 -40922156 + L1_Mur2 LINE L1 5471 5485 -401 3 1544 294 98 0 0 chrX 125728140 125728191 -40922105 + (TTAG)n Simple_repeat Simple_repeat 2 52 0 3 1544 2785 176 35 11 chrX 125728191 125728738 -40921558 - Lx4B LINE L1 -12 7046 6487 3 1544 355 137 0 0 chrX 125728738 125728789 -40921507 + L1_Mur2 LINE L1 5478 5528 -349 3 1544 1302 261 97 84 chrX 125728801 125729685 -40920611 - RMER17B LTR ERVK -30 878 1 3 1544 5146 154 18 4 chrX 125729685 125730653 -40919643 + Lx4B LINE L1 5523 6516 -542 3 1544 23 0 0 0 chrX 125730766 125730789 -40919507 + AT_rich Low_complexity Low_complexity 1 23 0 3 1544 248 263 0 0 chrX 125731728 125731785 -40918511 - L1M3 LINE L1 -2470 3670 3614 3 1544 207 0 0 0 chrX 125731794 125731817 -40918479 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1544 1083 65 0 14 chrX 125731817 125731958 -40918338 - B1_Mus1 SINE Alu -9 139 1 3 1544 192 77 0 0 chrX 125732056 125732082 -40918214 + (TC)n Simple_repeat Simple_repeat 1 26 0 3 1544 405 0 0 0 chrX 125732082 125732127 -40918169 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1544 333 307 57 66 chrX 125732224 125732451 -40917845 - MLT1E1A LTR MaLR -42 638 414 3 1544 271 167 56 0 chrX 125732464 125732518 -40917778 - MLT1E2 LTR MaLR -518 109 53 3 1544 226 316 53 0 chrX 125733170 125733246 -40917050 + MIRb SINE MIR 59 138 -130 3 1544 1207 254 108 72 chrX 125733715 125734333 -40915963 - L1MA8 LINE L1 -4 6287 5652 3 1544 501 92 0 0 chrX 125734333 125734409 -40915887 + (CA)n Simple_repeat Simple_repeat 1 76 0 3 1544 1207 254 108 72 chrX 125734409 125734528 -40915768 - L1MA8 LINE L1 -640 5651 5524 3 1544 4681 130 38 17 chrX 125734790 125735700 -40914596 + L1VL4 LINE L1 216 1158 -2401 3 1544 5598 106 18 11 chrX 125735699 125737071 -40913225 - L1_Mus3 LINE L1 -356 6282 4898 3 1544 2187 87 62 3 chrX 125737071 125737393 -40912903 + L1_Mus3 LINE L1 6297 6637 -1 3 1544 15450 92 30 6 chrX 125737393 125739740 -40910556 + L1VL4 LINE L1 1149 3553 -6 3 1544 351 0 0 0 chrX 125740189 125740228 -40910068 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 3 1544 189 0 0 0 chrX 125740240 125740261 -40910035 + (CAA)n Simple_repeat Simple_repeat 2 22 0 3 1544 708 12 0 0 chrX 125740580 125740661 -40909635 + (TC)n Simple_repeat Simple_repeat 2 82 0 3 1544 529 276 27 98 chrX 125740733 125740958 -40909338 - B3 SINE B2 -1 215 7 3 1544 362 284 11 22 chrX 125741161 125741341 -40908955 + L1MA8 LINE L1 6106 6283 -8 3 1544 971 164 34 0 chrX 125741404 125741581 -40908715 - B2_Mm2 SINE B2 -12 183 1 3 1544 268 167 182 0 chrX 125742471 125742537 -40907759 + Lx9 LINE L1 7358 7435 -209 3 1544 369 0 0 0 chrX 125742568 125742609 -40907687 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1544 459 0 0 0 chrX 125742609 125742659 -40907637 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 1544 445 148 0 19 chrX 125742690 125742793 -40907503 + Lx9 LINE L1 7544 7644 0 3 1544 313 362 49 19 chrX 125742999 125743171 -40907125 - MIR SINE MIR -66 196 21 3 1544 30472 101 6 16 chrX 125743309 125748658 -40901638 + L1Md_F2 LINE L1 273 5569 -314 3 1544 7225 74 2 10 chrX 125748658 125749317 -40900979 + L1Md_F2 LINE L1 5607 6263 -319 3 1544 3265 31 15 0 chrX 125749317 125749707 -40900589 + MTA_Mm LTR MaLR 1 396 0 3 1544 7225 74 2 10 chrX 125749707 125750020 -40900276 + L1Md_F2 LINE L1 6264 6571 -11 3 1544 324 0 0 0 chrX 125750239 125750275 -40900021 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1544 2948 246 108 23 chrX 125750301 125751535 -40898761 - Lx9 LINE L1 0 7644 6306 3 1544 1503 34 0 0 chrX 125751933 125752109 -40898187 + L1Md_F2 LINE L1 5411 5586 -297 4 1544 7991 49 2 0 chrX 125752109 125753089 -40897207 + L1Md_F2 LINE L1 5587 6568 -14 4 1544 2213 299 72 50 chrX 125753105 125754072 -40896224 - Lx8 LINE L1 -294 7179 6191 4 1544 2410 264 77 115 chrX 125754413 125756054 -40894242 - L1_Mur3 LINE L1 -420 5460 3882 4 1544 216 0 0 0 chrX 125756088 125756112 -40894184 + (TC)n Simple_repeat Simple_repeat 1 24 0 4 1544 405 58 0 0 chrX 125756113 125756165 -40894131 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1544 517 293 16 1 chrX 125756168 125756401 -40893895 - L1_Rod LINE L1 -4439 1408 1172 4 1544 277 227 90 11 chrX 125757327 125757416 -40892880 + L1MC LINE L1 4834 4929 -1217 4 1544 1001 280 67 16 chrX 125757449 125757939 -40892357 + L1_Mur3 LINE L1 4061 4575 -1305 4 1544 562 278 0 16 chrX 125757940 125758068 -40892228 - B1_Mur3 SINE Alu -18 131 6 4 1544 226 271 16 144 chrX 125757968 125758093 -40892203 - MT2B LTR ERVL -343 258 150 4 1544 2233 283 73 88 chrX 125758200 125758487 -40891809 + Lx8 LINE L1 6021 6320 -1153 4 1544 6724 80 13 11 chrX 125758487 125759422 -40890874 + L1Md_F2 LINE L1 5646 6582 0 4 1544 2233 283 73 88 chrX 125759422 125759914 -40890382 + Lx8 LINE L1 6321 6780 -693 4 1544 763 122 13 33 chrX 125759914 125760067 -40890229 + Lx LINE L1 6505 6654 0 4 1544 2233 283 73 88 chrX 125760067 125760259 -40890037 + Lx8 LINE L1 6781 6975 -498 4 1544 4088 74 4 0 chrX 125760259 125760797 -40889499 + L1_Mus1 LINE L1 6024 6563 -4 4 1544 2233 283 73 88 chrX 125760797 125760905 -40889391 + Lx8 LINE L1 6976 7086 -387 4 1544 513 181 29 0 chrX 125760923 125761028 -40889268 - Lx8 LINE L1 -576 6078 5971 4 1544 11035 217 49 71 chrX 125761023 125763277 -40887019 - L1VL2 LINE L1 -1045 4838 2717 4 1544 8313 32 4 0 chrX 125763277 125764268 -40886028 + L1Md_F2 LINE L1 5587 6581 -1 4 1544 11035 214 51 65 chrX 125764268 125765858 -40884438 - L1VL2 LINE L1 -3167 2716 1074 4 1544 381 43 0 0 chrX 125765858 125765905 -40884391 + (CAT)n Simple_repeat Simple_repeat 2 48 0 4 1544 4181 211 65 30 chrX 125765905 125766907 -40883389 - L1VL2 LINE L1 -5561 1073 310 4 1544 204 40 0 0 chrX 125767085 125767110 -40883186 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1544 340 343 68 34 chrX 125767170 125767318 -40882978 - RSINE1 SINE B4 -6 159 7 4 1544 1965 281 99 22 chrX 125767408 125768308 -40881988 + L1MC2 LINE L1 5265 6233 -111 4 1544 1781 228 53 3 chrX 125768359 125768733 -40881563 - MTD LTR MaLR 0 419 27 4 1544 243 0 0 0 chrX 125768744 125768771 -40881525 + (TC)n Simple_repeat Simple_repeat 1 27 0 4 1544 1437 253 85 8 chrX 125768901 125769276 -40881020 - Lx6 LINE L1 -27 7433 7030 4 1544 324 297 19 29 chrX 125769588 125769692 -40880604 - PB1D10 SINE Alu 0 117 15 4 1544 414 0 0 0 chrX 125769998 125770044 -40880252 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1544 1387 265 47 57 chrX 125770344 125770833 -40879463 + RLTR16 LTR ERVK 1 484 -21 4 1544 3351 120 48 13 chrX 125770963 125771505 -40878791 + Lx3B LINE L1 5735 6295 -678 4 1544 810 130 61 18 chrX 125771505 125771670 -40878626 + Lx3B LINE L1 6797 6968 -5 4 1544 600 315 41 29 chrX 125771910 125772259 -40878037 - Lx8 LINE L1 -1567 5906 5510 4 1544 486 361 0 0 chrX 125772307 125772440 -40877856 - B1F2 SINE Alu -16 133 1 4 1544 21 36 0 0 chrX 125773065 125773093 -40877203 + AT_rich Low_complexity Low_complexity 1 28 0 4 1544 638 287 59 91 chrX 125773236 125773543 -40876753 + Lx9 LINE L1 6862 7158 -486 4 1544 312 27 0 0 chrX 125774032 125774069 -40876227 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1544 218 354 0 15 chrX 125774130 125774196 -40876100 + PB1D10 SINE Alu 24 88 -29 4 1544 478 331 8 0 chrX 125774439 125774563 -40875733 + RSINE1 SINE B4 24 148 -17 4 1544 26 0 0 0 chrX 125774575 125774601 -40875695 + AT_rich Low_complexity Low_complexity 1 26 0 4 1544 2257 117 3 0 chrX 125776009 125776335 -40873961 + ORR1A2 LTR MaLR 1 327 0 4 1544 25 0 0 0 chrX 125776557 125776582 -40873714 + AT_rich Low_complexity Low_complexity 1 25 0 4 1544 271 398 8 0 chrX 125776633 125776756 -40873540 - MIR3 SINE MIR -4 204 81 4 1544 591 336 20 50 chrX 125777169 125777467 -40872829 - B4A SINE B4 -1 291 3 4 1544 237 382 25 31 chrX 125778685 125778847 -40871449 + L2c LINE L2 3182 3342 -45 4 1544 217 307 55 164 chrX 125778970 125779153 -40871143 + L2c LINE L2 3225 3387 0 4 1544 211 328 16 0 chrX 125779233 125779297 -40870999 - L2a LINE L2 -5 3421 3357 4 1544 285 29 0 0 chrX 125779719 125779753 -40870543 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1544 956 309 41 24 chrX 125780630 125780974 -40869322 + MTE2b LTR MaLR 12 332 -47 4 1544 276 79 138 0 chrX 125781100 125781252 -40869044 + (TA)n Simple_repeat Simple_repeat 2 174 0 4 1544 434 105 38 0 chrX 125781290 125781395 -40868901 + (TTATA)n Simple_repeat Simple_repeat 5 113 0 4 1544 402 292 18 0 chrX 125781650 125781763 -40868533 + PB1D10 SINE Alu 3 117 0 4 1544 22 35 0 0 chrX 125781798 125781827 -40868469 + AT_rich Low_complexity Low_complexity 1 29 0 4 1544 1635 234 26 28 chrX 125782296 125782718 -40867578 - MTC LTR MaLR 0 421 1 4 1544 1311 306 84 58 chrX 125783692 125783797 -40866499 + Lx8 LINE L1 6817 6905 -568 4 1544 1128 35 7 14 chrX 125783797 125783944 -40866352 + B1_Mus2 SINE Alu 2 147 0 4 1544 1311 306 84 58 chrX 125783944 125784458 -40865838 + Lx8 LINE L1 6906 7452 -21 4 1544 733 339 39 11 chrX 125785572 125786034 -40864262 - L1MB1 LINE L1 0 6168 5694 4 1544 729 292 38 62 chrX 125786066 125786358 -40863938 - MLT2B4 LTR ERVL -269 287 3 4 1544 218 297 104 47 chrX 125787482 125787588 -40862708 - MIRb SINE MIR -9 259 148 4 1544 192 339 83 50 chrX 125787630 125787751 -40862545 - MIRb SINE MIR -114 154 30 4 1544 210 297 0 15 chrX 125788236 125788301 -40861995 + GA-rich Low_complexity Low_complexity 2 65 0 4 1544 498 296 220 24 chrX 125788835 125789381 -40860915 + L1MC4 LINE L1 7259 7911 -131 4 1544 1491 159 4 0 chrX 125790218 125790476 -40859820 - L1_Mur2 LINE L1 -867 5010 4752 4 1544 2492 166 12 37 chrX 125790469 125790982 -40859314 - L1_Mur2 LINE L1 -1285 4592 4093 4 1544 3362 166 2 16 chrX 125790982 125791563 -40858733 + Lx3A LINE L1 5025 5597 -280 4 1544 1701 161 15 33 chrX 125791564 125791897 -40858399 - ORR1A4 LTR MaLR -2 327 1 4 1544 8477 161 49 139 chrX 125791897 125792230 -40858066 - ORR1A4-int LTR MaLR 0 1963 1678 4 1544 5514 59 6 7 chrX 125792230 125792947 -40857349 - L1Md_F2 LINE L1 -12 6570 5855 4 1544 8477 161 49 139 chrX 125792947 125794073 -40856223 - ORR1A4-int LTR MaLR -286 1677 674 4 1544 1129 62 7 0 chrX 125794073 125794218 -40856078 - B1_Mm SINE Alu 0 147 2 4 1544 8477 161 49 139 chrX 125794218 125794916 -40855380 - ORR1A4-int LTR MaLR -1290 673 1 4 1544 646 192 36 60 chrX 125794916 125795061 -40855235 - ORR1A4 LTR MaLR 0 329 189 4 1544 3389 170 31 31 chrX 125795061 125795703 -40854593 - RLTR26 LTR ERVK 0 642 1 4 1544 968 174 55 17 chrX 125795704 125795885 -40854411 - ORR1A4 LTR MaLR -141 188 1 4 1544 1095 193 0 0 chrX 125795888 125796080 -40854216 + Lx3A LINE L1 5606 5797 -1184 4 1544 26571 121 18 117 chrX 125796081 125799793 -40850503 + L1_Mus1 LINE L1 387 3445 -2438 4 1544 8314 25 16 3 chrX 125799793 125800775 -40849521 + L1Md_F2 LINE L1 5588 6582 0 4 1544 26571 107 7 127 chrX 125800775 125802626 -40847670 + L1_Mus1 LINE L1 3446 5293 -590 4 1544 854 146 7 0 chrX 125802626 125802763 -40847533 + B1_Mus1 SINE Alu 1 138 -10 4 1544 252 0 0 0 chrX 125802763 125802791 -40847505 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1544 26571 72 2 31 chrX 125802791 125804069 -40846227 + L1_Mus1 LINE L1 5294 6567 0 4 1544 6159 184 38 45 chrX 125804083 125805364 -40844932 + Lx4B LINE L1 5782 7054 -4 4 1544 450 308 15 44 chrX 125805491 125805627 -40844669 - RSINE1 SINE B4 -15 150 19 4 1544 521 162 9 0 chrX 125805778 125805889 -40844407 + (TA)n Simple_repeat Simple_repeat 1 112 0 4 1544 39 68 0 0 chrX 125805942 125806016 -40844280 + AT_rich Low_complexity Low_complexity 1 74 0 4 1544 270 295 30 37 chrX 125806052 125806186 -40844110 - L1MA5A LINE L1 -1 6296 6164 4 1544 215 203 17 0 chrX 125806457 125806516 -40843780 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1544 2726 164 79 81 chrX 125806592 125807368 -40842928 + RMER6C LTR ERVK 1 705 -51 4 1544 783 273 5 15 chrX 125807559 125807760 -40842536 + B3 SINE B2 2 200 -16 4 1544 4809 263 55 6 chrX 125807999 125809216 -40841080 - Lx6 LINE L1 0 7460 6184 4 1544 537 16 0 0 chrX 125809217 125809279 -40841017 + (TC)n Simple_repeat Simple_repeat 2 63 0 4 1544 387 41 0 0 chrX 125809279 125809327 -40840969 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1544 282 373 33 7 chrX 125809907 125810058 -40840238 - MIR SINE MIR -8 254 100 4 1544 257 330 97 63 chrX 125810177 125810384 -40839912 + MIR SINE MIR 3 216 -46 4 1544 32706 79 4 15 chrX 125810388 125815569 -40834727 + L1Md_F2 LINE L1 469 5586 -297 4 1544 7935 55 1 0 chrX 125815569 125816552 -40833744 + L1Md_F2 LINE L1 5587 6570 -12 4 1544 21 36 0 0 chrX 125817780 125817808 -40832488 + AT_rich Low_complexity Low_complexity 1 28 0 4 1544 375 265 83 57 chrX 125817974 125818202 -40832094 + L1MB4 LINE L1 5788 6021 -159 4 1544 389 276 14 20 chrX 125818597 125818745 -40831551 + L1MB4 LINE L1 6033 6179 -1 4 1544 220 220 17 0 chrX 125819294 125819353 -40830943 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 1544 3412 120 21 2 chrX 125819450 125819984 -40830312 - Lx3_Mus LINE L1 -2 7007 6464 4 1544 1161 163 134 32 chrX 125819988 125820345 -40829951 - LTRIS5 LTR ERV1 -10 437 1 4 1544 6756 88 55 4 chrX 125820345 125821897 -40828399 - Lx3_Mus LINE L1 -539 6470 4826 4 1544 1952 80 0 42 chrX 125821898 125822184 -40828112 + Lx3_Mus LINE L1 4530 4803 -1083 4 1544 660 229 14 14 chrX 125823732 125823878 -40826418 + B1_Mur1 SINE Alu 3 148 -1 4 1544 623 293 52 33 chrX 125824792 125825004 -40825292 - Tigger5 DNA MER2_type -13 2393 2178 4 1544 1045 272 13 4 chrX 125825038 125825271 -40825025 - Tigger5 DNA MER2_type -2159 247 13 4 1544 8455 32 0 0 chrX 125826770 125828062 -40822234 - L1Md_T LINE L1 -2 6580 5289 4 1545 4913 119 1 9 chrX 125829127 125829875 -40820421 + Lx LINE L1 5906 6647 -7 4 1545 519 354 0 6 chrX 125830871 125831030 -40819266 + B4A SINE B4 129 286 -6 4 1545 180 111 0 0 chrX 125831071 125831098 -40819198 + (TAA)n Simple_repeat Simple_repeat 1 27 0 4 1545 3134 179 25 5 chrX 125831218 125831790 -40818506 - Lx4B LINE L1 -405 6653 6071 4 1545 1400 264 50 35 chrX 125831882 125832286 -40818010 - MTD LTR MaLR 0 419 10 4 1545 956 96 19 0 chrX 125833077 125833234 -40817062 - L1_Mus3 LINE L1 -1 6637 6478 4 1545 1020 167 102 10 chrX 125833336 125833542 -40816754 + URR1B DNA MER1_type 1 225 0 4 1545 589 224 74 10 chrX 125833774 125833977 -40816319 - L1MA5 LINE L1 0 6300 6085 4 1545 245 253 17 0 chrX 125833998 125834066 -40816230 + B3A SINE B2 4 75 -120 4 1545 2272 146 2 65 chrX 125834068 125834501 -40815795 - RMER1B Other Other -16 1050 645 4 1545 1004 221 8 59 chrX 125834483 125834738 -40815558 + RMER1B Other Other 344 585 -481 4 1545 438 262 95 71 chrX 125834738 125834948 -40815348 + B3 SINE B2 2 216 0 5 1545 402 326 38 54 chrX 125835523 125835763 -40814533 + L2a LINE L2 3104 3339 -87 5 1545 515 303 39 26 chrX 125836421 125836577 -40813719 - RSINE1 SINE B4 0 165 8 5 1545 231 114 0 0 chrX 125836842 125836886 -40813410 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1545 192 152 0 0 chrX 125837763 125837796 -40812500 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 5 1545 243 0 0 0 chrX 125838416 125838443 -40811853 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 5 1545 437 229 33 1 chrX 125838463 125838569 -40811727 + PB1D10 SINE Alu 6 123 -4 5 1545 304 268 23 132 chrX 125838815 125838944 -40811352 - L2c LINE L2 -1 3386 3272 5 1545 630 283 37 16 chrX 125839404 125839594 -40810702 - 7SK RNA RNA -121 210 17 5 1545 241 366 99 0 chrX 125839658 125839759 -40810537 + MLT2D LTR ERVL 449 559 -1 5 1545 2036 139 6 15 chrX 125839868 125840197 -40810099 - ORR1A3 LTR MaLR 0 326 1 5 1545 447 242 43 25 chrX 125840414 125840612 -40809684 + MTD LTR MaLR 1 295 -124 5 1545 253 355 17 43 chrX 125840649 125840764 -40809532 + MER5A DNA MER1_type 77 188 -1 5 1545 3967 103 28 36 chrX 125842199 125842804 -40807492 + MT2B LTR ERVL 2 601 0 5 1545 207 0 0 0 chrX 125843035 125843058 -40807238 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1545 2978 38 0 45 chrX 125843067 125843449 -40806847 + RLTR10B2 LTR ERVK 1 365 0 5 1545 280 395 64 42 chrX 125843932 125844215 -40806081 + LTR90B LTR LTR 1 289 -507 5 1545 405 138 100 0 chrX 125845920 125846000 -40804296 - B1_Mus2 SINE Alu -2 145 58 5 1545 301 131 131 0 chrX 125846003 125846064 -40804232 + RMER6A LTR ERVK 4 72 -648 5 1545 4293 73 18 0 chrX 125846071 125846630 -40803666 - L1_Mus1 LINE L1 -1 6566 5998 5 1545 7067 98 1 11 chrX 125846637 125847780 -40802516 - L1Md_F2 LINE L1 0 6582 5506 5 1545 1017 82 6 64 chrX 125847780 125847936 -40802360 - B1_Mm SINE Alu 0 147 1 5 1545 6273 90 0 3 chrX 125847936 125848850 -40801446 - L1Md_F2 LINE L1 -381 5505 4595 5 1545 36189 43 0 3 chrX 125848897 125855120 -40795176 - L1Md_T LINE L1 0 6585 285 5 1545 1244 114 15 5 chrX 125855121 125855324 -40794972 - L1Md_F2 LINE L1 -31 6551 6347 5 1545 23140 111 23 19 chrX 125855324 125859782 -40790514 - L1Md_F LINE L1 -1169 4714 238 5 1545 2938 78 24 0 chrX 125859789 125860259 -40790037 - L1_Mus1 LINE L1 -556 6011 5531 5 1545 2947 193 45 13 chrX 125860278 125860903 -40789393 + RMER6A LTR ERVK 110 754 -2 5 1545 344 194 0 0 chrX 125860903 125860960 -40789336 - PB1D9 SINE Alu -55 65 9 5 1545 21 0 0 0 chrX 125861121 125861142 -40789154 + AT_rich Low_complexity Low_complexity 1 21 0 5 1545 888 261 9 168 chrX 125861155 125861381 -40788915 + B3 SINE B2 6 216 0 5 1545 24 77 0 0 chrX 125861387 125861439 -40788857 + AT_rich Low_complexity Low_complexity 1 52 0 5 1545 1063 286 10 38 chrX 125861505 125861898 -40788398 - Lx9 LINE L1 -256 7388 7007 5 1545 342 310 52 114 chrX 125861898 125862109 -40788187 - MTEa LTR MaLR -9 370 173 5 1545 396 108 23 35 chrX 125862128 125862214 -40788082 + CT-rich Low_complexity Low_complexity 1 85 0 5 1545 1197 264 108 19 chrX 125862215 125862734 -40787562 - Lx6 LINE L1 -1 7459 6528 5 1545 432 269 196 67 chrX 125862734 125862886 -40787410 - MTEa LTR MaLR -206 173 1 5 1545 344 376 28 14 chrX 125863779 125863922 -40786374 - MIR3 SINE MIR -24 184 40 5 1545 420 67 0 0 chrX 125864073 125864133 -40786163 + (CAGAGA)n Simple_repeat Simple_repeat 1 60 0 5 1545 635 361 59 4 chrX 125864225 125864495 -40785801 - MER90a LTR ERV1 -27 587 303 5 1545 1029 171 124 136 chrX 125864554 125864885 -40785411 - ORR1A4 LTR MaLR -2 327 1 5 1545 1555 259 47 15 chrX 125865014 125865418 -40784878 - MTD LTR MaLR 0 419 3 5 1545 384 144 163 22 chrX 125865891 125865983 -40784313 + RLTR24 LTR ERV1 177 281 -248 5 1545 258 32 0 0 chrX 125865987 125866018 -40784278 + (GGGAGA)n Simple_repeat Simple_repeat 1 31 0 5 1545 4500 109 40 5 chrX 125866065 125866731 -40783565 + Lx3A LINE L1 6286 6975 -6 5 1545 833 113 7 0 chrX 125866875 125867025 -40783271 + (GAA)n Simple_repeat Simple_repeat 3 153 0 5 1545 435 19 0 0 chrX 125867025 125867077 -40783219 + (CAA)n Simple_repeat Simple_repeat 1 52 0 5 1545 303 49 0 0 chrX 125867077 125867118 -40783178 + (GAA)n Simple_repeat Simple_repeat 2 42 0 5 1545 3649 150 117 35 chrX 125867118 125867671 -40782625 + RLTR13C2 LTR ERVK 1 570 -238 5 1545 396 0 0 0 chrX 125867671 125867715 -40782581 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1545 3649 150 117 35 chrX 125867715 125867908 -40782388 + RLTR13C2 LTR ERVK 571 807 -1 5 1545 819 150 0 0 chrX 125867908 125868048 -40782248 + (GAA)n Simple_repeat Simple_repeat 1 140 0 5 1545 221 354 175 12 chrX 125868694 125868854 -40781442 + MamSINE1 SINE tRNA 1 186 -104 5 1545 243 291 82 0 chrX 125869074 125869232 -40781064 + MER63D DNA AcHobo 64 234 -827 5 1545 688 229 0 0 chrX 125869249 125869380 -40780916 + B1_Mur1 SINE Alu 14 144 -5 5 1545 410 314 131 32 chrX 125869833 125870095 -40780201 - MT2A LTR ERVL -10 546 207 5 1545 425 284 46 0 chrX 125870139 125870248 -40780048 - MTEa LTR MaLR -263 116 3 5 1545 639 171 16 0 chrX 125870631 125870760 -40779536 + Lx2 LINE L1 6866 6996 -1 5 1545 441 0 0 0 chrX 125871336 125871385 -40778911 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 1545 241 355 115 28 chrX 125871469 125871648 -40778648 + MLT1H1 LTR MaLR 139 329 -266 5 1545 7412 88 14 10 chrX 125872155 125873887 -40776409 - L1_Mus2 LINE L1 -2 6564 4818 5 1545 339 245 0 30 chrX 125873943 125874044 -40776252 - L1VL2 LINE L1 -6138 197 100 5 1545 2084 197 149 25 chrX 125874048 125874651 -40775645 - Lx9 LINE L1 -2 7642 6965 5 1545 270 305 174 25 chrX 125874673 125874794 -40775502 + MLT1H1 LTR MaLR 292 430 -125 5 1545 273 303 52 72 chrX 125875126 125875279 -40775017 - MIRc SINE MIR -116 152 3 5 1545 414 0 0 0 chrX 125875663 125875709 -40774587 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 1545 267 103 0 0 chrX 125877480 125877519 -40772777 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1545 1301 255 51 35 chrX 125877940 125878088 -40772208 - Lx9 LINE L1 -43 7601 7447 5 1545 1402 190 175 0 chrX 125878088 125878420 -40771876 + ORR1B1 LTR MaLR 5 394 0 5 1545 6672 182 61 6 chrX 125878421 125879850 -40770446 + ORR1B1-int LTR MaLR 2 1509 0 5 1545 1461 199 130 22 chrX 125879851 125880206 -40770090 + ORR1B1 LTR MaLR 2 394 0 5 1545 1301 255 51 35 chrX 125880206 125880487 -40769809 - Lx9 LINE L1 -198 7446 7161 5 1545 23 0 0 0 chrX 125880522 125880545 -40769751 + AT_rich Low_complexity Low_complexity 1 23 0 5 1545 302 312 86 25 chrX 125880669 125880863 -40769433 - L2c LINE L2 -8 3418 3209 5 1545 570 168 0 0 chrX 125880942 125881055 -40769241 + GA-rich Low_complexity Low_complexity 2 114 0 5 1545 402 285 58 58 chrX 125881228 125881243 -40769053 - B1F SINE Alu 0 149 137 5 1545 207 88 0 0 chrX 125881243 125881277 -40769019 + (ATTG)n Simple_repeat Simple_repeat 2 35 0 5 1545 402 285 58 58 chrX 125881277 125881399 -40768897 - B1F SINE Alu -13 136 12 5 1545 311 353 106 40 chrX 125881715 125882340 -40767956 - L2c LINE L2 -798 2621 1956 5 1545 333 47 0 0 chrX 125882749 125882792 -40767504 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 1545 209 93 70 0 chrX 125882814 125882857 -40767439 + GA-rich Low_complexity Low_complexity 2 47 0 5 1545 180 282 35 93 chrX 125883432 125883518 -40766778 + MIR SINE MIR 65 145 -63 5 1545 412 354 16 0 chrX 125883699 125883826 -40766470 + RSINE1 SINE B4 10 138 -27 5 1545 642 126 0 0 chrX 125883864 125883967 -40766329 + (TC)n Simple_repeat Simple_repeat 2 104 0 5 1545 39 50 0 0 chrX 125883972 125884032 -40766264 + AT_rich Low_complexity Low_complexity 1 60 0 5 1545 2823 104 4 93 chrX 125884040 125884526 -40765770 - Lx2A LINE L1 -1 7007 6565 5 1545 1695 69 8 0 chrX 125884527 125884773 -40765523 + MusHAL1 LINE L1 1667 1914 -798 5 1545 1679 149 98 28 chrX 125884847 125885164 -40765132 + ORR1B2 LTR MaLR 1 339 -28 5 1545 471 18 0 0 chrX 125886824 125886880 -40763416 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1545 593 194 83 0 chrX 125886896 125887004 -40763292 - B3A SINE B2 -81 117 1 5 1545 1097 75 7 0 chrX 125887391 125887538 -40762758 + B1_Mus1 SINE Alu 1 148 0 5 1545 296 317 134 21 chrX 125887769 125887956 -40762340 - MLT1A0 LTR MaLR -14 581 374 5 1545 630 267 143 57 chrX 125887990 125888304 -40761992 - MLT1A0 LTR MaLR 0 365 25 5 1545 898 275 9 5 chrX 125889526 125889738 -40760558 + B3 SINE B2 1 213 -3 5 1545 24 0 0 0 chrX 125889745 125889769 -40760527 + AT_rich Low_complexity Low_complexity 1 24 0 5 1545 188 189 0 36 chrX 125890400 125890455 -40759841 + CT-rich Low_complexity Low_complexity 2 54 0 5 1545 429 276 60 0 chrX 125890502 125890618 -40759678 - B1F SINE Alu -17 132 10 5 1545 225 220 87 71 chrX 125890536 125890663 -40759633 + YREP_Mm Unknown Unknown 224 352 -1460 5 1545 23 0 0 0 chrX 125891323 125891346 -40758950 + AT_rich Low_complexity Low_complexity 1 23 0 5 1545 38548 5 0 0 chrX 125891462 125896818 -40753478 + L1Md_A LINE L1 230 5586 -297 5 1545 9015 2 0 0 chrX 125896818 125897813 -40752483 + L1Md_A LINE L1 5587 6581 -1 5 1545 38548 4 0 1 chrX 125897813 125897825 -40752471 + L1Md_A LINE L1 5587 5597 -286 5 1545 1645 208 50 19 chrX 125898140 125898503 -40751793 - ORR1D1 LTR MaLR 0 374 1 5 1545 981 247 41 17 chrX 125898550 125898842 -40751454 - RMER6B LTR ERVK 0 461 163 5 1545 918 227 82 86 chrX 125898934 125899237 -40751059 + MT2A LTR ERVL 1 302 -231 5 1545 519 17 0 0 chrX 125899256 125899316 -40750980 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 1545 236 59 59 0 chrX 125899318 125899352 -40750944 + MT2_Mm LTR ERVL 458 493 0 5 1545 1922 299 19 21 chrX 125899768 125900349 -40749947 + Lx9 LINE L1 6622 7201 -443 5 1545 383 310 78 0 chrX 125900523 125900639 -40749657 + Lx8 LINE L1 7158 7282 -191 5 1545 540 320 29 72 chrX 125900738 125901017 -40749279 + RMER5 LTR ERV1 218 484 -50 5 1545 363 78 0 0 chrX 125901655 125901706 -40748590 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 1545 2315 167 123 0 chrX 125901764 125902212 -40748084 + RMER6D LTR ERVK 4 506 -214 5 1545 2784 202 81 16 chrX 125902370 125903003 -40747293 + RLTR33 LTR ERVK 1 674 -4 6 1545 1133 157 16 0 chrX 125903004 125903195 -40747101 + RMER6D LTR ERVK 497 690 0 5 1545 201 169 24 72 chrX 125903473 125903556 -40746740 + (TTATA)n Simple_repeat Simple_repeat 1 79 0 6 1545 456 239 54 0 chrX 125903597 125903689 -40746607 + PB1D7 SINE Alu 19 115 -5 6 1545 311 309 63 24 chrX 125903995 125904121 -40746175 - L2a LINE L2 -10 3416 3286 6 1545 322 371 69 11 chrX 125904175 125904363 -40745933 + MIRb SINE MIR 20 218 -50 6 1545 580 272 150 4 chrX 125904852 125905085 -40745211 + RMER20B LTR ERVK 231 497 -130 6 1545 385 299 0 20 chrX 125905276 125905375 -40744921 + RMER20B LTR ERVK 504 600 -27 6 1545 258 107 0 51 chrX 125906120 125906179 -40744117 + (TTTAA)n Simple_repeat Simple_repeat 1 56 0 6 1545 894 313 66 90 chrX 125906985 125907609 -40742687 - Lx8 LINE L1 -7 7466 6858 6 1545 337 310 61 91 chrX 125907822 125908167 -40742129 - MLT1A1 LTR MaLR -21 344 5 6 1545 460 68 27 0 chrX 125908639 125908712 -40741584 + (TC)n Simple_repeat Simple_repeat 1 75 0 6 1545 478 289 45 78 chrX 125908712 125908866 -40741430 - B1F SINE Alu 0 149 1 6 1545 645 49 0 0 chrX 125910066 125910147 -40740149 + (TC)n Simple_repeat Simple_repeat 2 82 0 6 1545 378 292 31 0 chrX 125910981 125911077 -40739219 + RSINE1 SINE B4 61 159 -6 6 1545 276 30 0 0 chrX 125911091 125911124 -40739172 + (TA)n Simple_repeat Simple_repeat 2 34 0 6 1545 220 234 0 0 chrX 125912027 125912074 -40738222 + (TAA)n Simple_repeat Simple_repeat 1 47 0 6 1545 180 111 0 0 chrX 125912246 125912273 -40738023 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 6 1545 543 241 20 27 chrX 125912287 125912436 -40737860 - B3 SINE B2 0 216 69 6 1545 3137 157 17 0 chrX 125912831 125913360 -40736936 - L1Md_F LINE L1 -102 5781 5244 6 1545 4829 152 38 16 chrX 125913360 125914233 -40736063 + Lx LINE L1 5760 6651 -3 6 1545 16316 127 22 17 chrX 125914288 125917676 -40732620 - L1Md_F LINE L1 -2091 3792 387 6 1545 6478 118 3 1 chrX 125917676 125918156 -40732140 + L1_Mus2 LINE L1 4922 5401 -482 6 1545 243 0 0 0 chrX 125918156 125918183 -40732113 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1545 7239 82 7 24 chrX 125918183 125919364 -40730932 + L1_Mus2 LINE L1 5402 6564 -2 6 1545 373 269 11 0 chrX 125919672 125919765 -40730531 - PB1D10 SINE Alu -21 96 3 6 1545 529 328 0 33 chrX 125919914 125920094 -40730202 - MLT1A0 LTR MaLR -191 174 1 6 1545 3518 178 115 82 chrX 125920212 125921074 -40729222 + RMER19B LTR ERVK 1 890 -12 6 1545 248 319 0 94 chrX 125921291 125921440 -40728856 + B1F2 SINE Alu 2 136 -13 6 1545 311 45 0 22 chrX 125921440 125921486 -40728810 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 6 1545 355 260 0 0 chrX 125921572 125921649 -40728647 + RMER1B Other Other 44 120 -946 6 1545 1578 221 197 48 chrX 125921724 125922181 -40728115 + RMER1B Other Other 55 579 -487 6 1545 1784 172 107 23 chrX 125922191 125922536 -40727760 + ORR1B1 LTR MaLR 21 394 0 6 1545 3137 226 75 16 chrX 125922537 125923339 -40726957 + RMER1B Other Other 138 1055 -11 6 1545 21 0 0 0 chrX 125923739 125923760 -40726536 + AT_rich Low_complexity Low_complexity 1 21 0 6 1545 27 0 0 0 chrX 125924036 125924063 -40726233 + AT_rich Low_complexity Low_complexity 1 27 0 6 1545 232 229 0 0 chrX 125924874 125924922 -40725374 + MTD LTR MaLR 1 48 -311 6 1545 675 213 59 0 chrX 125925419 125925555 -40724741 - B1F SINE Alu -5 144 1 6 1545 222 62 0 0 chrX 125926220 125926252 -40724044 + (GTTTG)n Simple_repeat Simple_repeat 2 33 0 6 1545 493 225 19 29 chrX 125926256 125926361 -40723935 - B1_Mur3 SINE Alu -13 136 33 6 1545 1179 246 134 20 chrX 125926402 125926759 -40723537 + MTD LTR MaLR 22 419 0 6 1545 1489 214 59 14 chrX 125926768 125927123 -40723173 + ORR1D1 LTR MaLR 4 374 0 6 1545 732 342 63 45 chrX 125927540 125927932 -40722364 + MLT2B1 LTR ERVL 4 408 -112 6 1545 1935 143 33 51 chrX 125927932 125928264 -40722032 - ORR1A3 LTR MaLR 0 326 1 6 1545 732 342 63 45 chrX 125928264 125928296 -40722000 + MLT2B1 LTR ERVL 409 436 -84 6 1545 280 268 304 0 chrX 125929215 125929363 -40720933 + B3 SINE B2 3 195 -21 6 1545 375 23 0 0 chrX 125929388 125929432 -40720864 + (ATTG)n Simple_repeat Simple_repeat 3 46 0 6 1545 38207 44 1 3 chrX 125931285 125937853 -40712443 - L1Md_T LINE L1 0 6585 2 6 1545 24 0 0 0 chrX 125937959 125937983 -40712313 + AT_rich Low_complexity Low_complexity 1 24 0 6 1545 589 330 76 31 chrX 125938178 125938469 -40711827 - MLT1A0 LTR MaLR -17 348 45 6 1545 6688 124 64 11 chrX 125938743 125940282 -40710014 + Lx LINE L1 5002 6654 0 6 1545 1113 83 0 7 chrX 125940460 125940606 -40709690 + B1_Mm SINE Alu 2 146 -1 6 1545 22 0 0 0 chrX 125940606 125940628 -40709668 + AT_rich Low_complexity Low_complexity 1 22 0 6 1545 592 320 24 49 chrX 125940639 125940803 -40709493 + RSINE1 SINE B4 6 165 0 6 1545 255 61 0 0 chrX 125940803 125940836 -40709460 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1545 597 28 0 0 chrX 125940836 125940907 -40709389 + (GA)n Simple_repeat Simple_repeat 2 72 0 6 1545 615 228 15 7 chrX 125940965 125941102 -40709194 + B1_Mm SINE Alu 5 142 -5 6 1545 624 298 5 59 chrX 125941362 125941565 -40708731 + Lx8 LINE L1 6274 6465 -1008 6 1545 1312 78 0 11 chrX 125941591 125941773 -40708523 - L1_Mus2 LINE L1 0 6566 6387 6 1545 24 0 0 0 chrX 125942245 125942269 -40708027 + AT_rich Low_complexity Low_complexity 1 24 0 6 1545 277 289 3 26 chrX 125942990 125943075 -40707221 + MIRb SINE MIR 39 123 -145 6 1545 1032 248 41 108 chrX 125943135 125943287 -40707009 + MTD LTR MaLR 1 131 -288 6 1545 450 0 0 0 chrX 125943287 125943337 -40706959 + (TTA)n Simple_repeat Simple_repeat 2 51 0 6 1545 1032 248 41 108 chrX 125943337 125943417 -40706879 + MTD LTR MaLR 132 203 -216 6 1545 1183 43 0 0 chrX 125943417 125943558 -40706738 + B1_Mm SINE Alu 1 141 -6 6 1545 432 0 0 0 chrX 125943559 125943607 -40706689 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1545 1052 259 45 101 chrX 125943607 125943747 -40706549 + MTD LTR MaLR 190 335 -65 6 1545 506 340 19 6 chrX 125944253 125944413 -40705883 - MER5A DNA MER1_type -27 162 1 6 1545 591 15 0 0 chrX 125944810 125944878 -40705418 + (TG)n Simple_repeat Simple_repeat 2 69 0 6 1545 542 169 0 42 chrX 125944977 125945097 -40705199 + MTC LTR MaLR 1 113 -283 6 1545 6993 147 49 12 chrX 125945143 125946428 -40703868 - Lx4A LINE L1 0 7058 5727 6 1545 310 241 21 75 chrX 125946428 125946522 -40703774 - MTD LTR MaLR -330 89 1 6 1545 320 247 25 0 chrX 125946540 125946621 -40703675 + L2a LINE L2 3342 3424 -2 6 1545 198 128 0 0 chrX 125946951 125946990 -40703306 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 1545 491 270 24 0 chrX 125947572 125947698 -40702598 - 7SK RNA RNA -199 132 4 6 1545 464 0 18 0 chrX 125948893 125948949 -40701347 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1545 396 328 0 25 chrX 125949208 125949327 -40700969 - PB1D10 SINE Alu -1 116 1 6 1545 306 152 0 0 chrX 125949859 125949918 -40700378 + A-rich Low_complexity Low_complexity 1 59 0 6 1545 180 111 0 0 chrX 125950424 125950451 -40699845 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 6 1545 384 22 0 0 chrX 125950929 125950974 -40699322 + (TC)n Simple_repeat Simple_repeat 2 46 0 6 1545 411 106 0 0 chrX 125950974 125951039 -40699257 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 1545 1086 267 37 106 chrX 125951934 125952340 -40697956 + MTE2b LTR MaLR 1 378 -1 6 1545 383 242 71 24 chrX 125952482 125952609 -40697687 + Ricksha_c DNA MuDR 381 513 -1535 6 1545 194 256 88 55 chrX 125952610 125952701 -40697595 + L2 LINE L2 2288 2381 -1038 6 1545 274 304 0 60 chrX 125952701 125952785 -40697511 + Ricksha_c DNA MuDR 643 721 -1327 6 1545 1312 194 50 108 chrX 125952793 125953134 -40697162 - ORR1A4 LTR MaLR -8 321 1 6 1545 588 162 51 0 chrX 125953153 125953270 -40697026 + Ricksha_c DNA MuDR 755 877 -1171 6 1545 305 123 0 34 chrX 125953424 125953483 -40696813 - ORR1A3 LTR MaLR -170 156 100 6 1545 238 154 0 0 chrX 125953767 125953806 -40696490 + MLT2B5 LTR ERVL 517 555 0 6 1545 523 84 0 0 chrX 125953829 125953912 -40696384 + Lx2 LINE L1 6912 6994 -3 6 1545 330 26 0 0 chrX 125954170 125954209 -40696087 + (TTA)n Simple_repeat Simple_repeat 3 41 0 6 1545 369 0 0 0 chrX 125954776 125954817 -40695479 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1545 421 275 90 34 chrX 125955149 125955326 -40694970 - MER5A DNA MER1_type -2 187 1 6 1545 1824 214 19 17 chrX 125955404 125955822 -40694474 - MTD LTR MaLR 0 419 1 6 1545 387 60 0 0 chrX 125955826 125955876 -40694420 + (TTCC)n Simple_repeat Simple_repeat 4 53 0 6 1545 620 293 45 51 chrX 125955884 125956266 -40694030 + L1MA5A LINE L1 5474 5866 -431 6 1545 297 157 0 0 chrX 125956419 125956470 -40693826 - MTD LTR MaLR -360 59 9 6 1545 387 41 0 0 chrX 125956501 125956550 -40693746 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 6 1545 3001 84 21 7 chrX 125956834 125957265 -40693031 + Lx3_Mus LINE L1 6561 6997 -12 6 1545 546 16 0 0 chrX 125957278 125957341 -40692955 + (GGAA)n Simple_repeat Simple_repeat 4 66 0 6 1545 22 56 0 0 chrX 125957358 125957394 -40692902 + AT_rich Low_complexity Low_complexity 1 36 0 6 1545 246 188 45 45 chrX 125957456 125957523 -40692773 + MTE2b LTR MaLR 6 72 -302 6 1545 2319 72 0 3 chrX 125957583 125957891 -40692405 + L1_Mus4 LINE L1 6327 6633 -3 6 1545 283 239 0 53 chrX 125958026 125958101 -40692195 + MT2A LTR ERVL 58 128 -405 6 1545 288 254 0 15 chrX 125958039 125958107 -40692189 + MTE2b LTR MaLR 67 133 -246 6 1545 1492 103 0 68 chrX 125958145 125958395 -40691901 - L1Md_F2 LINE L1 -11 6571 6339 6 1545 1964 33 0 0 chrX 125958396 125958638 -40691658 + L1Md_F2 LINE L1 6106 6347 -235 6 1545 926 166 6 0 chrX 125959082 125959257 -40691039 + GA-rich Low_complexity Low_complexity 3 178 0 6 1546 1246 262 27 10 chrX 125960717 125961010 -40689286 - ORR1D2 LTR MaLR 0 370 73 6 1546 271 406 54 39 chrX 125961504 125961763 -40688533 - L2a LINE L2 -174 3252 2990 6 1546 533 305 42 9 chrX 125961764 125961979 -40688317 + ORR1E LTR MaLR 1 222 -137 6 1546 234 282 237 0 chrX 125962164 125962295 -40688001 - L2a LINE L2 0 3426 3265 6 1546 338 134 15 0 chrX 125962506 125962573 -40687723 + (TA)n Simple_repeat Simple_repeat 1 68 0 6 1546 534 325 48 6 chrX 125962579 125962746 -40687550 + B3A SINE B2 2 175 -23 7 1546 26 82 0 0 chrX 125962765 125962826 -40687470 + AT_rich Low_complexity Low_complexity 1 61 0 7 1546 20681 56 1 5 chrX 125963173 125967011 -40683285 + L1Md_Gf LINE L1 75 3993 -1893 7 1546 34327 55 8 5 chrX 125967000 125972507 -40677789 + L1Md_T LINE L1 101 5586 -297 7 1546 8421 33 1 0 chrX 125972507 125973502 -40676794 + L1Md_T LINE L1 5587 6582 0 7 1546 15734 22 1 0 chrX 125973590 125975978 -40674318 + L1Md_T LINE L1 3970 6359 -223 7 1546 39412 5 0 0 chrX 125975979 125982541 -40667755 - L1Md_A LINE L1 0 6582 20 7 1546 1824 59 0 0 chrX 125982541 125982778 -40667518 + L1Md_T LINE L1 6346 6582 0 7 1546 732 254 22 8 chrX 125983916 125984278 -40666018 - Lx4B LINE L1 -4 7054 6601 7 1546 5047 112 4 2 chrX 125984269 125985085 -40665211 - L1_Mur1 LINE L1 -471 5415 4599 7 1546 1585 132 4 0 chrX 125985074 125985340 -40664956 + L1_Mur1 LINE L1 4071 4337 -1549 7 1546 26 50 0 0 chrX 125985404 125985444 -40664852 + AT_rich Low_complexity Low_complexity 1 40 0 7 1546 770 327 70 11 chrX 125985741 125986025 -40664271 - RMER15 LTR ERVL 0 575 275 7 1546 225 243 155 14 chrX 125988887 125988958 -40661338 + ID4_ SINE ID 3 83 0 7 1546 1145 60 18 6 chrX 125989148 125989315 -40660981 - L1_Mus3 LINE L1 -8 6630 6462 7 1546 311 255 81 9 chrX 125989689 125989800 -40660496 - MER103 DNA DNA -47 119 1 7 1546 654 293 85 29 chrX 125992556 125992758 -40657538 + Lx8 LINE L1 7083 7301 -172 7 1546 189 0 0 0 chrX 125992758 125992779 -40657517 + (CATATA)n Simple_repeat Simple_repeat 4 24 0 7 1546 654 293 85 29 chrX 125992779 125992857 -40657439 + Lx8 LINE L1 7302 7378 -95 7 1546 23 0 0 0 chrX 125993114 125993137 -40657159 + AT_rich Low_complexity Low_complexity 1 23 0 7 1546 3131 191 129 9 chrX 125993146 125993798 -40656498 + RMER19A LTR ERVK 8 737 0 7 1546 7714 35 16 1 chrX 125994038 125995261 -40655035 - L1Md_F2 LINE L1 -4 6578 5336 7 1546 314 319 54 41 chrX 125995261 125995379 -40654917 + MER5A1 DNA MER1_type 17 141 -25 7 1546 3372 186 39 40 chrX 125995379 125996100 -40654196 + RMER6D LTR ERVK 1 720 0 7 1546 314 319 54 41 chrX 125996100 125996128 -40654168 + MER5A1 DNA MER1_type 142 165 -1 7 1546 665 336 62 45 chrX 125996200 125996536 -40653760 - ORR1E LTR MaLR -17 342 1 7 1546 6943 166 29 39 chrX 125996778 125997607 -40652689 + Lx LINE L1 4442 5234 -649 7 1546 513 0 0 0 chrX 125997607 125997664 -40652632 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 7 1546 6943 127 35 19 chrX 125997664 125998611 -40651685 + Lx LINE L1 5235 6561 -436 7 1546 352 141 39 0 chrX 125999626 125999704 -40650592 + CT-rich Low_complexity Low_complexity 4 84 0 7 1546 283 304 0 14 chrX 125999746 125999816 -40650480 - B1F1 SINE Alu -80 69 1 7 1546 838 292 110 12 chrX 126000153 126000472 -40649824 - MLT1A0 LTR MaLR -3 362 13 1 1546 669 25 0 0 chrX 126000527 126000606 -40649690 + (CA)n Simple_repeat Simple_repeat 2 80 0 2 1546 7251 76 5 17 chrX 126000873 126002072 -40648224 - L1_Mus2 LINE L1 -1 6565 5381 3 1546 483 315 47 43 chrX 126002076 126002475 -40647821 - MLT1C LTR MaLR -28 439 1 4 1546 33 43 0 0 chrX 126003957 126004004 -40646292 + AT_rich Low_complexity Low_complexity 1 47 0 5 1546 1127 258 75 57 chrX 126004081 126004467 -40645829 + RMER13A LTR ERVK 2 394 -466 6 1546 399 319 190 14 chrX 126004523 126004739 -40645557 + RMER13A LTR ERVK 607 860 0 6 1546 556 322 14 9 chrX 126004795 126005005 -40645291 - Lx8 LINE L1 -155 7318 7108 7 1546 319 318 9 52 chrX 126005010 126005126 -40645170 - PB1D10 SINE Alu -6 111 1 8 1546 1254 222 116 9 chrX 126005161 126005497 -40644799 + ORR1D1 LTR MaLR 3 374 0 9 1546 260 221 242 0 chrX 126006010 126006105 -40644191 + PB1D7 SINE Alu 1 118 -2 1 1546 666 278 137 11 chrX 126006121 126006383 -40643913 + MLT1B LTR MaLR 96 390 0 1 1546 237 175 0 0 chrX 126007017 126007057 -40643239 + L1MA5 LINE L1 5893 5932 -368 1 1546 489 170 0 0 chrX 126007081 126007193 -40643103 + CT-rich Low_complexity Low_complexity 1 112 0 1 1546 401 0 20 0 chrX 126007193 126007242 -40643054 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1546 257 373 0 0 chrX 126007464 126007574 -40642722 + Lx8 LINE L1 7033 7142 -331 1 1546 641 323 35 0 chrX 126007695 126007893 -40642403 + RMER15 LTR ERVL 371 575 0 1 1546 243 289 50 30 chrX 126007997 126008097 -40642199 - MLT1A0 LTR MaLR 0 365 264 1 1546 5810 60 1 1 chrX 126009182 126009913 -40640383 - L1_Mus1 LINE L1 0 6567 5837 1 1546 261 0 0 0 chrX 126010224 126010253 -40640043 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1 1546 223 339 39 8 chrX 126010335 126010421 -40639875 - MIR SINE MIR -33 229 145 2 1546 2676 215 87 88 chrX 126010421 126011381 -40638915 + RMER17B LTR ERVK 1 958 0 2 1546 223 339 39 8 chrX 126011381 126011422 -40638874 - MIR SINE MIR -118 144 99 2 1546 471 342 127 35 chrX 126011802 126012530 -40637766 + L2a LINE L2 2614 3414 -12 2 1546 350 235 22 45 chrX 126012548 126012637 -40637659 + PB1D10 SINE Alu 17 103 -14 2 1546 369 0 0 0 chrX 126013178 126013219 -40637077 + (TTAG)n Simple_repeat Simple_repeat 4 44 0 2 1546 267 316 12 50 chrX 126013870 126013950 -40636346 - ID4 SINE ID -4 79 3 2 1546 307 278 28 0 chrX 126014194 126014266 -40636030 + ID SINE ID 9 82 -142 2 1546 692 300 34 13 chrX 126014682 126015082 -40635214 + L1M1 LINE L1 5333 5741 -2044 2 1546 854 230 11 48 chrX 126015221 126015408 -40634888 + B3A SINE B2 8 187 -11 2 1546 259 293 48 8 chrX 126015436 126015560 -40634736 + L1M2 LINE L1 5595 5723 -568 2 1546 210 192 0 0 chrX 126017113 126017165 -40633131 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1546 403 376 6 53 chrX 126019338 126019509 -40630787 - RSINE1 SINE B4 0 165 3 3 1546 567 0 0 0 chrX 126020044 126020107 -40630189 + (GA)n Simple_repeat Simple_repeat 2 64 0 3 1546 212 265 100 92 chrX 126020342 126020461 -40629835 - MIRm SINE MIR -76 132 18 3 1546 320 296 6 68 chrX 126020790 126020953 -40629343 + L1MC5 LINE L1 7758 7910 -51 3 1546 356 288 17 51 chrX 126021162 126021279 -40629017 + PB1D10 SINE Alu 5 117 0 3 1546 231 331 171 29 chrX 126021892 126022032 -40628264 + RSINE1 SINE B4 6 165 0 3 1546 369 0 0 0 chrX 126022178 126022219 -40628077 + (TTG)n Simple_repeat Simple_repeat 1 41 0 3 1546 461 298 0 0 chrX 126022219 126022323 -40627973 - PB1D10 SINE Alu -13 104 1 3 1546 239 222 42 0 chrX 126022439 126022511 -40627785 - L1MC5 LINE L1 -588 7373 7299 3 1546 470 316 85 29 chrX 126022639 126023099 -40627197 - L1MC4 LINE L1 -4562 1749 1248 4 1546 266 360 11 11 chrX 126023170 126023260 -40627036 - L2 LINE L2 -2048 1371 1282 4 1546 309 26 0 0 chrX 126023843 126023881 -40626415 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1546 299 281 24 24 chrX 126023898 126023982 -40626314 - PB1D10 SINE Alu -12 105 22 4 1546 1227 266 71 15 chrX 126024266 126024605 -40625691 + MTEa LTR MaLR 20 377 -2 4 1546 21 0 0 0 chrX 126024788 126024809 -40625487 + AT_rich Low_complexity Low_complexity 1 21 0 4 1546 552 111 0 0 chrX 126024824 126024923 -40625373 + (TG)n Simple_repeat Simple_repeat 1 99 0 4 1546 845 255 21 0 chrX 126024929 126025117 -40625179 - B4A SINE B4 -20 272 81 4 1546 246 299 28 24 chrX 126025255 126025351 -40624945 - PB1D10 SINE Alu -50 99 1 4 1546 192 216 0 0 chrX 126025974 126026025 -40624271 + T-rich Low_complexity Low_complexity 1 51 0 4 1546 4043 88 22 14 chrX 126026029 126026608 -40623688 - L1_Mus1 LINE L1 -1 6566 5983 5 1546 379 290 18 27 chrX 126026903 126027013 -40623283 - ID_B1 SINE B4 -12 212 104 5 1546 754 264 81 41 chrX 126027115 126027312 -40622984 - B3A SINE B2 -11 205 1 5 1546 423 0 0 0 chrX 126029197 126029244 -40621052 + (A)n Simple_repeat Simple_repeat 1 47 0 5 1546 300 359 72 95 chrX 126029619 126029725 -40620571 + MLT1L LTR MaLR 18 118 -492 5 1546 1167 244 44 121 chrX 126029725 126030131 -40620165 + MTE2a LTR MaLR 1 375 -4 5 1546 300 359 72 95 chrX 126030131 126030424 -40619872 + MLT1L LTR MaLR 119 408 -202 5 1546 370 252 13 53 chrX 126030568 126030719 -40619577 + L1MD3 LINE L1 7840 7984 -11 5 1546 234 264 26 70 chrX 126030719 126030833 -40619463 - Charlie1a DNA MER1_type -43 1412 1304 5 1546 1227 285 85 31 chrX 126030922 126031465 -40618831 - Charlie1a DNA MER1_type -185 1270 699 5 1546 3809 171 41 45 chrX 126032038 126032816 -40617480 - RLTR40 LTR ERVK -9 808 34 5 1546 378 0 0 0 chrX 126033354 126033396 -40616900 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1546 551 286 70 55 chrX 126033898 126034298 -40615998 + L1M4 LINE L1 4005 4410 -1736 6 1546 443 300 92 49 chrX 126034328 126034761 -40615535 + L1MA7 LINE L1 1827 2684 -4165 6 1546 1245 67 0 0 chrX 126035062 126035226 -40615070 + (GGGAA)n Simple_repeat Simple_repeat 3 166 0 6 1546 459 287 25 13 chrX 126035324 126035483 -40614813 + L1MA7 LINE L1 4216 4376 -2466 6 1546 1936 161 50 15 chrX 126035491 126035831 -40614465 + ORR1B2 LTR MaLR 1 352 -15 6 1546 1413 189 83 28 chrX 126035847 126036135 -40614161 + ORR1B2-int LTR MaLR 129 432 -1077 6 1546 420 20 0 0 chrX 126036317 126036366 -40613930 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 6 1546 263 281 47 37 chrX 126036370 126036477 -40613819 + L1MA7 LINE L1 5475 5582 -1263 6 1546 1390 292 75 50 chrX 126036558 126037695 -40612601 + L1MA7 LINE L1 5817 6986 -7 6 1546 7609 72 7 11 chrX 126037724 126038790 -40611506 - L1_Mur1 LINE L1 -702 5184 4124 6 1546 820 182 126 36 chrX 126038786 126038990 -40611306 + Lx3A LINE L1 6740 6969 -12 6 1546 582 15 0 0 chrX 126038990 126039057 -40611239 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 6 1546 820 182 126 36 chrX 126039057 126039074 -40611222 + Lx3A LINE L1 6970 6981 0 6 1546 422 269 62 45 chrX 126039328 126039507 -40610789 + L1MB8 LINE L1 4397 4578 -1568 6 1546 1060 287 93 19 chrX 126039513 126039826 -40610470 - ORR1E LTR MaLR -4 355 20 6 1546 543 98 0 42 chrX 126039846 126039942 -40610354 + L1_Mus2 LINE L1 6475 6566 0 7 1546 371 319 0 0 chrX 126039949 126040087 -40610209 + L1MB8 LINE L1 5551 5688 -486 6 1546 2665 212 25 63 chrX 126040088 126040240 -40610056 - RMER15 LTR ERVL 0 575 420 7 1546 2211 40 11 4 chrX 126040240 126040519 -40609777 - L1Md_F3 LINE L1 -14 6570 6290 7 1546 2665 212 25 63 chrX 126040519 126040964 -40609332 - RMER15 LTR ERVL -156 419 1 7 1546 855 279 44 2 chrX 126040970 126041289 -40609007 + L1MB8 LINE L1 5693 6032 -151 6 1546 1079 90 7 0 chrX 126041291 126041436 -40608860 + B1_Mm SINE Alu 2 147 0 7 1546 25 31 0 0 chrX 126041677 126041709 -40608587 + AT_rich Low_complexity Low_complexity 1 32 0 7 1546 364 289 72 102 chrX 126041709 126041875 -40608421 - RSINE1 SINE B4 -2 163 3 7 1546 1017 284 82 31 chrX 126042082 126042434 -40607862 + ORR1D2 LTR MaLR 1 370 0 7 1546 1879 169 76 22 chrX 126042723 126043080 -40607216 + ORR1B1 LTR MaLR 19 394 0 7 1546 331 328 83 30 chrX 126043456 126043588 -40606708 + LTR88b LTR Gypsy? 688 826 -11 7 1546 1693 198 85 0 chrX 126045179 126045533 -40604763 + ORR1C2 LTR MaLR 1 384 0 7 1546 30 69 0 0 chrX 126045658 126045716 -40604580 + AT_rich Low_complexity Low_complexity 1 58 0 8 1546 728 117 27 27 chrX 126046197 126046372 -40603924 - L1Md_A LINE L1 0 6582 6432 8 1546 213 333 65 0 chrX 126046412 126046505 -40603791 - L2a LINE L2 -2 3424 3326 8 1546 312 336 26 0 chrX 126046803 126046919 -40603377 - Lx8 LINE L1 -1096 6377 6259 8 1546 212 231 0 0 chrX 126046982 126047034 -40603262 + (CAGAGA)n Simple_repeat Simple_repeat 3 54 0 8 1546 180 0 0 0 chrX 126047274 126047294 -40603002 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 1546 1734 140 174 23 chrX 126047469 126047574 -40602722 - Lx2 LINE L1 -2 6995 6865 8 1546 201 74 0 0 chrX 126047574 126047601 -40602695 + (CCCA)n Simple_repeat Simple_repeat 2 28 0 8 1546 1734 140 174 23 chrX 126047601 126047846 -40602450 - Lx2 LINE L1 -133 6864 6593 8 1546 233 211 0 0 chrX 126047878 126047916 -40602380 + B1_Mus2 SINE Alu 1 38 -109 8 1546 888 133 0 0 chrX 126048027 126048170 -40602126 + (TTC)n Simple_repeat Simple_repeat 2 144 0 8 1546 387 0 0 0 chrX 126048533 126048576 -40601720 + (T)n Simple_repeat Simple_repeat 1 43 0 9 1546 2356 160 29 8 chrX 126048576 126048794 -40601502 - L1_Mur1 LINE L1 -3974 1912 1688 9 1546 369 0 0 0 chrX 126048794 126048835 -40601461 + (TTG)n Simple_repeat Simple_repeat 2 42 0 9 1546 2356 160 29 8 chrX 126048835 126049102 -40601194 - L1_Mur1 LINE L1 -4199 1687 1419 9 1546 254 29 0 28 chrX 126049102 126049138 -40601158 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 9 1546 1409 228 92 46 chrX 126049138 126049596 -40600700 - L1_Mur1 LINE L1 -632 5215 4724 9 1546 283 0 0 0 chrX 126049655 126049694 -40600602 - L1_Mus2 LINE L1 -1 6565 6527 9 1546 192 305 116 45 chrX 126049715 126049914 -40600382 + L2c LINE L2 3050 3262 -125 9 1546 204 342 0 42 chrX 126050016 126050135 -40600161 + GA-rich Low_complexity Low_complexity 5 118 0 9 1546 24 53 0 0 chrX 126051351 126051389 -40598907 + AT_rich Low_complexity Low_complexity 1 38 0 9 1546 1172 244 154 40 chrX 126051419 126051795 -40598501 - MTD LTR MaLR 0 419 1 9 1546 336 244 68 74 chrX 126053389 126053579 -40596717 + L1_Mur3 LINE L1 902 1090 -6638 9 1546 250 229 43 0 chrX 126053573 126053643 -40596653 + L1_Mur3 LINE L1 1547 1619 -4261 9 1546 4194 53 0 0 chrX 126053643 126054153 -40596143 + L1_Mus1 LINE L1 6057 6566 -1 1 1546 22 0 0 0 chrX 126054153 126054175 -40596121 + AT_rich Low_complexity Low_complexity 1 22 0 1 1546 603 367 71 24 chrX 126054428 126054682 -40595614 + B4A SINE B4 1 266 -26 1 1546 183 80 0 0 chrX 126055190 126055215 -40595081 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1546 461 297 163 8 chrX 126055215 126055344 -40594952 - B3A SINE B2 -48 150 2 1 1546 4575 84 27 2 chrX 126056064 126056696 -40593600 - L1_Mus1 LINE L1 0 6567 5920 1 1546 8835 226 129 22 chrX 126056696 126057588 -40592708 - L1VL1 LINE L1 -951 4935 3954 1 1546 2160 158 52 5 chrX 126057588 126057970 -40592326 + RLTR9D LTR ERVK 1 400 -3 1 1546 11217 114 38 8 chrX 126057970 126061420 -40588876 - L1VL1 LINE L1 -1933 3953 217 1 1546 396 0 0 0 chrX 126061474 126061518 -40588778 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 1 1546 2199 148 16 19 chrX 126061623 126062002 -40588294 + ORR1C1 LTR MaLR 1 378 0 1 1546 380 245 52 169 chrX 126062181 126062353 -40587943 + RSINE1 SINE B4 4 155 -10 1 1546 211 267 62 62 chrX 126063184 126063280 -40587016 - MIRc SINE MIR -13 255 160 1 1546 351 231 0 37 chrX 126064205 126064286 -40586010 + B3A SINE B2 7 84 -114 1 1546 447 264 192 28 chrX 126064327 126064650 -40585646 - L1MA6 LINE L1 -109 6191 5816 1 1546 453 178 19 0 chrX 126064787 126064894 -40585402 - Lx5 LINE L1 0 7050 6942 1 1546 227 264 18 54 chrX 126064939 126064995 -40585301 + PB1D7 SINE Alu 56 109 -11 1 1546 5217 64 0 7 chrX 126065280 126065954 -40584342 - L1Md_F2 LINE L1 -12 6570 5902 1 1546 23 33 0 0 chrX 126066260 126066290 -40584006 + AT_rich Low_complexity Low_complexity 1 30 0 1 1546 299 285 61 26 chrX 126066438 126066596 -40583700 - L1M5 LINE L1 -1147 4999 4836 1 1546 436 297 77 6 chrX 126067110 126067266 -40583030 + ORR1E LTR MaLR 1 167 -192 1 1546 548 242 168 16 chrX 126067521 126067706 -40582590 - B3 SINE B2 -3 213 1 1 1546 424 269 36 22 chrX 126067729 126067866 -40582430 - B1F2 SINE Alu -6 143 5 1 1546 25 0 0 0 chrX 126068039 126068064 -40582232 + AT_rich Low_complexity Low_complexity 1 25 0 1 1546 662 228 51 7 chrX 126068954 126069091 -40581205 - B1_Mur1 SINE Alu -5 144 2 1 1546 22 35 0 0 chrX 126069330 126069359 -40580937 + AT_rich Low_complexity Low_complexity 1 29 0 1 1546 285 282 0 35 chrX 126069615 126069729 -40580567 - L1M5 LINE L1 -3777 2438 2329 1 1546 255 283 0 0 chrX 126069724 126069831 -40580465 - L1MC4 LINE L1 -3943 2291 2171 1 1546 370 278 99 27 chrX 126070187 126070298 -40579998 + RSINE1 SINE B4 43 161 -4 1 1546 29 47 0 0 chrX 126070366 126070409 -40579887 + AT_rich Low_complexity Low_complexity 1 43 0 1 1546 560 14 0 14 chrX 126070629 126070699 -40579597 + (GTTTG)n Simple_repeat Simple_repeat 2 70 0 1 1546 1107 56 7 0 chrX 126070699 126070833 -40579463 - B1_Mm SINE Alu -8 139 5 1 1546 1564 55 0 0 chrX 126071080 126071282 -40579014 - L1_Mus1 LINE L1 -1 6566 6365 1 1546 713 264 29 43 chrX 126071317 126071527 -40578769 - B3 SINE B2 -5 211 5 1 1546 5408 89 25 26 chrX 126072994 126073803 -40576493 + RLTR13C2 LTR ERVK 1 808 0 1 1546 8825 58 4 12 chrX 126074330 126076159 -40574137 - L1Md_F2 LINE L1 0 6582 4769 1 1546 7084 67 3 8 chrX 126076154 126077061 -40573235 + L1_Mus1 LINE L1 5664 6566 -1 1 1546 25 0 0 0 chrX 126077061 126077086 -40573210 + AT_rich Low_complexity Low_complexity 1 25 0 1 1546 360 64 0 0 chrX 126077112 126077159 -40573137 + (CTA)n Simple_repeat Simple_repeat 1 47 0 1 1546 312 70 0 0 chrX 126077159 126077202 -40573094 + (TAA)n Simple_repeat Simple_repeat 3 45 0 1 1546 23 33 0 0 chrX 126078561 126078591 -40571705 + AT_rich Low_complexity Low_complexity 1 30 0 1 1546 37 90 0 0 chrX 126078664 126078764 -40571532 + AT_rich Low_complexity Low_complexity 1 100 0 1 1546 3641 266 17 50 chrX 126078913 126079921 -40570375 + RMER1C Other Other 257 1320 -22 1 1546 221 214 0 0 chrX 126079926 126079968 -40570328 + B3A SINE B2 1 42 -156 1 1546 746 336 29 95 chrX 126081343 126081649 -40568647 + B4 SINE B4 2 287 -5 1 1546 245 292 0 14 chrX 126081978 126082051 -40568245 + GA-rich Low_complexity Low_complexity 2 73 0 1 1546 366 276 79 72 chrX 126082549 126082814 -40567482 + L1MEe LINE L1 2038 2304 -3862 1 1546 261 182 0 0 chrX 126082923 126082978 -40567318 + T-rich Low_complexity Low_complexity 1 55 0 1 1546 4964 42 0 7 chrX 126082982 126083586 -40566710 - L1Md_F2 LINE L1 -3 6579 5980 1 1546 371 392 63 5 chrX 126083604 126083827 -40566469 + L1MEe LINE L1 2435 2670 -3476 1 1546 2675 172 48 6 chrX 126084080 126084576 -40565720 - RMER5 LTR ERV1 -10 524 8 1 1546 372 226 69 109 chrX 126084548 126084722 -40565574 + MT2B LTR ERVL 98 264 -337 1 1546 978 61 0 0 chrX 126084626 126084757 -40565539 + B1_Mus2 SINE Alu 17 147 0 1 1546 445 312 8 31 chrX 126084784 126084913 -40565383 + RSINE1 SINE B4 40 165 0 1 1546 432 0 0 0 chrX 126085888 126085936 -40564360 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 1546 453 369 84 68 chrX 126086090 126086401 -40563895 + LTR40b LTR ERVL 130 445 -17 1 1546 253 301 67 19 chrX 126086689 126086794 -40563502 - PB1D10 SINE Alu -1 116 7 1 1546 276 272 120 0 chrX 126087067 126087159 -40563137 - B1F2 SINE Alu -7 142 40 1 1546 576 0 0 0 chrX 126087374 126087438 -40562858 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 1 1546 640 218 134 69 chrX 126087618 126087915 -40562381 + L1MB8 LINE L1 5877 6178 0 1 1546 227 172 33 44 chrX 126088040 126088131 -40562165 + GA-rich Low_complexity Low_complexity 3 92 0 1 1546 635 271 0 0 chrX 126088676 126088798 -40561498 + RSINE1 SINE B4 3 124 -41 1 1546 435 68 0 0 chrX 126088800 126088859 -40561437 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1546 279 0 0 0 chrX 126088859 126088889 -40561407 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 1546 1360 55 11 37 chrX 126089050 126089078 -40561218 - B2_Mm1t SINE B2 -9 184 161 1 1546 351 0 0 0 chrX 126089078 126089117 -40561179 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1 1546 1360 55 11 37 chrX 126089117 126089277 -40561019 - B2_Mm1t SINE B2 -33 160 1 1 1546 361 237 97 202 chrX 126089311 126089549 -40560747 - B3 SINE B2 -2 214 2 1 1546 347 340 0 10 chrX 126090036 126090140 -40560156 + PB1D10 SINE Alu 15 117 0 1 1546 559 325 36 107 chrX 126090142 126090459 -40559837 + MLT1F2 LTR MaLR 1 443 -117 1 1546 225 221 65 65 chrX 126090440 126090532 -40559764 + MLT1F2 LTR MaLR 557 648 -6 1 1546 199 194 48 0 chrX 126090638 126090700 -40559596 + GA-rich Low_complexity Low_complexity 6 70 0 1 1546 26 0 0 0 chrX 126091037 126091063 -40559233 + AT_rich Low_complexity Low_complexity 1 26 0 1 1546 424 297 18 0 chrX 126091066 126091177 -40559119 - PB1D9 SINE Alu -2 118 6 1 1547 689 250 28 23 chrX 126091340 126091516 -40558780 + B3A SINE B2 4 180 -18 1 1547 26 30 0 0 chrX 126091531 126091564 -40558732 + AT_rich Low_complexity Low_complexity 1 33 0 1 1547 21 0 0 0 chrX 126092195 126092216 -40558080 + AT_rich Low_complexity Low_complexity 1 21 0 1 1547 573 316 6 28 chrX 126093049 126093164 -40557132 + B4A SINE B4 82 196 -96 1 1547 2695 58 6 6 chrX 126093164 126093512 -40556784 + L1_Mus1 LINE L1 6220 6567 0 1 1547 573 316 6 28 chrX 126093512 126093578 -40556718 + B4A SINE B4 197 259 -33 1 1547 232 204 0 18 chrX 126093606 126093661 -40556635 + (CATA)n Simple_repeat Simple_repeat 3 56 0 1 1547 1093 145 130 0 chrX 126094038 126094238 -40556058 + URR1A DNA MER1_type 1 226 0 1 1547 279 0 0 0 chrX 126096412 126096443 -40553853 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1 1547 377 265 41 0 chrX 126096865 126096963 -40553333 - BC1_Mm scRNA scRNA -50 102 1 1 1547 1192 152 9 0 chrX 126097806 126098017 -40552279 - Lx2 LINE L1 -8 6989 6777 1 1547 3957 134 59 0 chrX 126098269 126098909 -40551387 - RLTR33 LTR ERVK 0 678 1 1 1547 4137 117 13 3 chrX 126099006 126099622 -40550674 + Lx LINE L1 5984 6605 -49 1 1547 444 318 23 15 chrX 126101957 126102088 -40548208 + B1F SINE Alu 7 138 -11 1 1547 27 49 0 0 chrX 126102130 126102171 -40548125 + AT_rich Low_complexity Low_complexity 1 41 0 1 1547 786 258 62 68 chrX 126102879 126103233 -40547063 - L1MA4 LINE L1 -365 5935 5584 1 1547 22 35 0 0 chrX 126103301 126103330 -40546966 + AT_rich Low_complexity Low_complexity 1 29 0 1 1547 581 281 106 0 chrX 126103333 126103493 -40546803 - B3 SINE B2 -38 178 2 1 1547 27 29 0 0 chrX 126103554 126103588 -40546708 + AT_rich Low_complexity Low_complexity 1 34 0 1 1547 229 306 48 58 chrX 126103682 126103786 -40546510 + ORSL DNA Tip100 8 110 -165 1 1547 261 319 65 21 chrX 126103910 126104003 -40546293 + MLT1A1 LTR MaLR 1 97 -311 1 1547 963 0 0 0 chrX 126104017 126104124 -40546172 + (GGGAA)n Simple_repeat Simple_repeat 4 110 0 1 1547 1432 11 23 0 chrX 126104126 126104302 -40545994 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 1547 196 300 0 0 chrX 126104487 126104537 -40545759 + L2a LINE L2 3364 3413 -13 1 1547 426 69 0 0 chrX 126106585 126106643 -40543653 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1547 246 336 39 23 chrX 126106735 126106863 -40543433 - B1F1 SINE Alu -8 141 12 1 1547 4516 109 18 3 chrX 126106944 126107613 -40542683 - Lx2 LINE L1 0 6997 6319 1 1547 2002 81 10 21 chrX 126107614 126107838 -40542458 + Lx2 LINE L1 5596 5822 -1175 1 1547 2898 66 49 10 chrX 126107838 126108223 -40542073 + MTB LTR MaLR 1 400 0 1 1547 2002 81 10 21 chrX 126108223 126108289 -40542007 + Lx2 LINE L1 5823 5883 -1114 1 1547 480 125 2 0 chrX 126108291 126108382 -40541914 + Lx2 LINE L1 6200 6293 -683 1 1547 212 259 35 0 chrX 126108463 126108521 -40541775 + MIRc SINE MIR 99 158 -110 1 1547 455 263 8 58 chrX 126108873 126108994 -40541302 - RSINE1 SINE B4 0 165 51 1 1547 23114 131 36 25 chrX 126109176 126115497 -40534799 - L1_Mus2 LINE L1 -3 6563 221 2 1547 243 343 28 19 chrX 126115561 126115668 -40534628 + PB1D9 SINE Alu 2 109 -11 2 1547 212 86 29 0 chrX 126117621 126117656 -40532640 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 1547 366 42 0 0 chrX 126117656 126117704 -40532592 + (GA)n Simple_repeat Simple_repeat 2 49 0 2 1547 4338 40 2 0 chrX 126117979 126118525 -40531771 - L1Md_F2 LINE L1 -355 6227 5681 2 1547 850 309 94 29 chrX 126118616 126119029 -40531267 - Lx8 LINE L1 -4 7469 7030 2 1547 336 225 0 22 chrX 126119015 126119106 -40531190 - L1M2 LINE L1 -482 5809 5721 2 1547 616 274 81 77 chrX 126119213 126119379 -40530917 + Lx9 LINE L1 6900 7058 -586 2 1547 2445 122 29 12 chrX 126119379 126119551 -40530745 - RLTR9F LTR ERVK 0 415 244 2 1547 207 0 0 0 chrX 126119551 126119574 -40530722 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 2 1547 2445 122 29 12 chrX 126119574 126119809 -40530487 - RLTR9F LTR ERVK -172 243 2 2 1547 616 274 81 77 chrX 126119809 126119939 -40530357 + Lx9 LINE L1 7059 7197 -447 2 1547 450 285 71 13 chrX 126120321 126120545 -40529751 + Lx8 LINE L1 6585 6821 -652 2 1547 346 296 119 8 chrX 126120576 126120702 -40529594 + Lx8 LINE L1 7140 7279 -194 2 1547 259 275 14 0 chrX 126121222 126121291 -40529005 - ID4 SINE ID -10 73 4 2 1547 423 0 0 0 chrX 126121308 126121355 -40528941 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1547 2011 214 34 41 chrX 126121462 126122018 -40528278 - Lx7 LINE L1 0 7696 7145 2 1547 3555 183 48 12 chrX 126122020 126122829 -40527467 - L1_Mur3 LINE L1 -600 5280 4443 2 1547 3324 66 0 2 chrX 126122858 126123298 -40526998 + L1_Mus1 LINE L1 6080 6518 -49 2 1547 198 0 0 0 chrX 126123298 126123320 -40526976 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 2 1547 3944 166 13 5 chrX 126123320 126124089 -40526207 - L1_Mur3 LINE L1 -1462 4418 3644 2 1547 1024 286 90 33 chrX 126124089 126124422 -40525874 + ORR1B1 LTR MaLR 1 352 -42 2 1547 26 0 0 0 chrX 126124462 126124488 -40525808 + AT_rich Low_complexity Low_complexity 1 26 0 2 1547 21 0 0 0 chrX 126124520 126124541 -40525755 + AT_rich Low_complexity Low_complexity 1 21 0 2 1547 1257 227 130 19 chrX 126124784 126125161 -40525135 + MTD LTR MaLR 1 419 0 2 1547 985 98 0 0 chrX 126125680 126125812 -40524484 + B1_Mm SINE Alu 9 140 -7 2 1547 26 30 0 0 chrX 126125815 126125848 -40524448 + AT_rich Low_complexity Low_complexity 1 33 0 2 1547 5147 112 36 1 chrX 126125948 126126880 -40523416 - L1_Mus3 LINE L1 -713 5925 4947 2 1547 2829 108 19 15 chrX 126126878 126127290 -40523006 + L1_Mus4 LINE L1 6126 6538 -98 2 1547 994 76 0 14 chrX 126127290 126127437 -40522859 + (GGGGA)n Simple_repeat Simple_repeat 1 145 0 2 1547 2829 108 19 15 chrX 126127437 126127486 -40522810 + L1_Mus4 LINE L1 6539 6589 -47 2 1547 695 53 0 21 chrX 126127491 126127588 -40522708 + (GGAAA)n Simple_repeat Simple_repeat 3 97 0 2 1547 277 221 14 42 chrX 126127590 126127661 -40522635 - ORR1E LTR MaLR -46 313 245 2 1547 21 0 0 0 chrX 126127716 126127737 -40522559 + AT_rich Low_complexity Low_complexity 1 21 0 2 1547 410 348 43 16 chrX 126127851 126128038 -40522258 - ORR1E LTR MaLR -167 192 1 2 1547 22 35 0 0 chrX 126128254 126128283 -40522013 + AT_rich Low_complexity Low_complexity 1 29 0 2 1547 306 372 61 14 chrX 126128389 126128536 -40521760 + HAL1-3A_ME LINE L1 2284 2437 -421 2 1547 306 0 0 0 chrX 126128536 126128570 -40521726 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 2 1547 281 288 27 0 chrX 126128749 126128822 -40521474 + ID2 SINE ID 5 79 -4 2 1547 188 301 35 24 chrX 126128990 126129075 -40521221 + L2a LINE L2 3333 3418 -8 2 1547 248 278 0 0 chrX 126129307 126129402 -40520894 + polypurine Low_complexity Low_complexity 1 95 0 2 1547 7324 92 2 3 chrX 126129953 126131635 -40518661 + L1_Mus1 LINE L1 4889 6567 0 2 1547 931 182 11 16 chrX 126131651 126131835 -40518461 + LTRIS5 LTR ERV1 255 437 -10 2 1547 486 139 0 25 chrX 126131935 126131947 -40518349 - B1_Mus2 SINE Alu 0 147 136 2 1547 1336 125 4 17 chrX 126131947 126132183 -40518113 - Lx LINE L1 -2 6652 6420 2 1547 486 139 0 25 chrX 126132183 126132251 -40518045 - B1_Mus2 SINE Alu -12 135 69 2 1547 2495 79 0 12 chrX 126132252 126132586 -40517710 + L1_Mus1 LINE L1 6238 6567 0 2 1547 347 319 88 51 chrX 126132772 126133046 -40517250 + L1MC4a LINE L1 5740 6023 -1859 2 1547 612 0 0 0 chrX 126133244 126133312 -40516984 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 2 1547 594 220 0 85 chrX 126133447 126133576 -40516720 + B3 SINE B2 1 118 -98 2 1547 24 0 0 0 chrX 126133587 126133611 -40516685 + AT_rich Low_complexity Low_complexity 1 24 0 2 1547 1789 206 77 8 chrX 126134641 126135033 -40515263 + MTD LTR MaLR 1 419 0 2 1547 4840 72 0 2 chrX 126136457 126137082 -40513214 + L1_Mus2 LINE L1 5943 6566 0 2 1547 320 276 65 8 chrX 126137220 126137344 -40512952 + MER5C DNA MER1_type 130 260 -53 2 1547 545 333 56 15 chrX 126137483 126137678 -40512618 - MER58A DNA MER1_type -12 212 10 2 1547 342 197 14 0 chrX 126137903 126137974 -40512322 - MLT1A0 LTR MaLR -5 403 332 2 1547 201 200 22 0 chrX 126138115 126138160 -40512136 + (TAGA)n Simple_repeat Simple_repeat 2 47 0 2 1547 183 80 0 0 chrX 126138352 126138377 -40511919 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1547 531 0 0 0 chrX 126138377 126138436 -40511860 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 2 1547 210 91 0 0 chrX 126138440 126138473 -40511823 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1547 943 153 51 6 chrX 126138577 126138754 -40511542 + B2_Mm2 SINE B2 1 185 -10 2 1547 308 364 44 35 chrX 126138900 126139014 -40511282 - MLT1A0 LTR MaLR -106 259 145 2 1547 611 269 222 0 chrX 126139023 126139194 -40511102 - ID_B1 SINE B4 0 224 16 2 1547 511 220 59 72 chrX 126139210 126139362 -40510934 - MLT1A0 LTR MaLR -215 150 1 2 1547 399 289 116 89 chrX 126139647 126139837 -40510459 - B3A SINE B2 0 198 4 2 1547 180 0 0 0 chrX 126140557 126140577 -40509719 + (CAT)n Simple_repeat Simple_repeat 3 22 0 2 1547 1009 188 52 0 chrX 126141045 126141237 -40509059 + B3 SINE B2 14 215 -1 2 1547 243 302 9 19 chrX 126142320 126142428 -40507868 + GA-rich Low_complexity Low_complexity 1 107 0 2 1547 235 326 50 10 chrX 126142537 126142636 -40507660 - L2 LINE L2 -1001 2418 2316 2 1547 401 323 97 9 chrX 126143571 126143799 -40506497 + MamRep605 Unknown Unknown 92 339 -537 2 1547 2119 160 75 3 chrX 126143976 126144351 -40505945 - Lx4A LINE L1 -5 7053 6652 2 1547 1030 177 140 5 chrX 126144972 126145193 -40505103 + Lx6 LINE L1 5408 5658 -222 2 1547 1496 179 101 4 chrX 126145193 126145604 -40504692 - RMER17C LTR ERVK -519 439 16 2 1547 1093 88 0 7 chrX 126145607 126145756 -40504540 - B1_Mus1 SINE Alu 0 148 1 2 1547 1329 205 78 9 chrX 126145760 126146095 -40504201 + Lx6 LINE L1 5658 6015 -1035 2 1547 2470 53 9 6 chrX 126146630 126146951 -40503345 + L1Md_F2 LINE L1 6247 6568 -14 2 1547 31 0 0 0 chrX 126146951 126146982 -40503314 + AT_rich Low_complexity Low_complexity 1 31 0 2 1547 2014 282 55 123 chrX 126150126 126151175 -40499121 + Lx6 LINE L1 6057 7419 -41 2 1547 908 187 52 6 chrX 126151301 126151473 -40498823 + URR1B DNA MER1_type 12 191 -34 2 1547 1612 289 47 14 chrX 126151547 126152119 -40498177 + Lx9 LINE L1 6459 7049 -595 2 1547 1327 260 29 19 chrX 126152139 126152449 -40497847 - MTD LTR MaLR 0 419 107 2 1547 254 292 112 0 chrX 126152491 126152580 -40497716 + Lx9 LINE L1 7062 7160 -484 2 1547 288 0 0 0 chrX 126152600 126152632 -40497664 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1547 29 0 0 0 chrX 126153011 126153040 -40497256 + AT_rich Low_complexity Low_complexity 1 29 0 2 1547 248 212 24 0 chrX 126153231 126153316 -40496980 + (CATA)n Simple_repeat Simple_repeat 4 90 0 2 1547 284 327 0 20 chrX 126153332 126153485 -40496811 + (CATA)n Simple_repeat Simple_repeat 2 151 0 2 1547 261 0 0 0 chrX 126153486 126153515 -40496781 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1547 21088 161 16 23 chrX 126153702 126156358 -40493938 - Lx LINE L1 -11 6643 3985 2 1547 2840 24 33 3 chrX 126156358 126156694 -40493602 - ORR1A0 LTR MaLR 0 346 1 2 1547 13892 52 10 1 chrX 126156694 126158471 -40491825 - ORR1A0-int LTR MaLR 0 1792 1 2 1547 3080 26 0 0 chrX 126158471 126158817 -40491479 - ORR1A0 LTR MaLR 0 346 1 2 1547 21088 175 29 29 chrX 126158817 126162269 -40488027 - Lx LINE L1 -1899 3984 554 2 1547 643 308 9 9 chrX 126162495 126162708 -40487588 + B3 SINE B2 4 216 0 2 1547 608 314 145 75 chrX 126162719 126163106 -40487190 - MLT1B LTR MaLR -53 414 1 2 1547 1535 179 11 79 chrX 126164215 126164568 -40485728 + ORR1A4 LTR MaLR 1 329 0 2 1547 2837 128 12 0 chrX 126164568 126164998 -40485298 + ORR1A4-int LTR MaLR 1 435 -1528 2 1547 4547 57 2 2 chrX 126165009 126165602 -40484694 - L1_Mm LINE L1 0 5883 5291 2 1547 4057 48 12 0 chrX 126165602 126166104 -40484192 + L1Md_F3 LINE L1 6077 6584 0 2 1547 1646 169 35 94 chrX 126166108 126166512 -40483784 + ORR1A4-int LTR MaLR 421 800 -1163 2 1547 1374 169 56 63 chrX 126166302 126166586 -40483710 + MT2B LTR ERVL 6 287 -314 2 1547 6042 162 28 22 chrX 126166544 126167862 -40482434 + ORR1A4-int LTR MaLR 556 1792 0 2 1547 1634 153 26 78 chrX 126167862 126168209 -40482087 + ORR1A4 LTR MaLR 1 329 0 2 1547 333 255 3 19 chrX 126169157 126169245 -40481051 - B1F2 SINE Alu 0 117 35 2 1547 386 249 118 54 chrX 126169719 126169940 -40480356 - L2a LINE L2 -3 3423 3189 2 1547 410 261 87 0 chrX 126170381 126170496 -40479800 + B1F SINE Alu 25 149 0 2 1547 309 289 31 52 chrX 126170667 126171004 -40479292 + L1MA6 LINE L1 5597 5936 -364 2 1547 794 204 55 5 chrX 126171282 126171546 -40478750 + ORR1B2 LTR MaLR 1 361 -6 2 1547 859 132 0 13 chrX 126173551 126173704 -40476592 + (TTTC)n Simple_repeat Simple_repeat 1 151 0 2 1547 358 211 143 0 chrX 126174184 126174275 -40476021 - B1F2 SINE Alu 0 120 17 2 1547 226 271 0 0 chrX 126174436 126174495 -40475801 + L1ME3 LINE L1 6096 6154 -8 2 1547 913 309 236 38 chrX 126174893 126175398 -40474898 - MLT1E3 LTR MaLR -20 660 56 2 1547 1163 276 20 57 chrX 126176107 126176456 -40473840 + MTEa LTR MaLR 1 336 -43 2 1547 1137 68 7 0 chrX 126176487 126176633 -40473663 + B1_Mus1 SINE Alu 1 147 -1 2 1547 243 0 0 0 chrX 126176896 126176923 -40473373 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1547 24 0 0 0 chrX 126177876 126177900 -40472396 + AT_rich Low_complexity Low_complexity 1 24 0 2 1547 22 35 0 0 chrX 126178125 126178154 -40472142 + AT_rich Low_complexity Low_complexity 1 29 0 2 1547 1027 193 33 33 chrX 126178274 126178326 -40471970 + B3 SINE B2 1 47 -169 2 1547 813 102 0 7 chrX 126178326 126178464 -40471832 + Lx LINE L1 6518 6654 0 2 1547 1027 193 33 33 chrX 126178464 126178625 -40471671 + B3 SINE B2 48 214 -2 2 1547 1456 157 53 47 chrX 126180201 126180541 -40469755 - Lx7 LINE L1 0 7696 7355 2 1547 4378 33 0 0 chrX 126180618 126181129 -40469167 - L1Md_T LINE L1 -1 6581 6071 3 1547 2257 42 7 3 chrX 126181134 126181417 -40468879 + L1Md_F3 LINE L1 6300 6583 -1 3 1547 444 364 7 0 chrX 126182019 126182159 -40468137 + MER5A DNA MER1_type 49 189 0 3 1547 2244 157 30 0 chrX 126182530 126182931 -40467365 + Lx4B LINE L1 5721 6133 -925 3 1547 376 189 42 7 chrX 126182931 126183075 -40467221 + (TA)n Simple_repeat Simple_repeat 1 149 0 3 1547 1213 215 39 14 chrX 126183080 126183359 -40466937 + Lx4B LINE L1 6132 6417 -641 3 1547 24 53 0 0 chrX 126183628 126183666 -40466630 + AT_rich Low_complexity Low_complexity 1 38 0 3 1547 21 0 0 0 chrX 126184516 126184537 -40465759 + AT_rich Low_complexity Low_complexity 1 21 0 3 1547 223 415 12 30 chrX 126184567 126184731 -40465565 - L2 LINE L2 -594 2825 2665 3 1547 250 351 21 0 chrX 126184916 126185010 -40465286 + Lx8 LINE L1 7232 7327 -146 3 1547 25 0 0 0 chrX 126185074 126185099 -40465197 + AT_rich Low_complexity Low_complexity 1 25 0 3 1547 638 265 99 0 chrX 126186277 126186439 -40463857 + MTEb LTR MaLR 1 178 -201 3 1547 363 178 0 0 chrX 126186502 126186603 -40463693 + CT-rich Low_complexity Low_complexity 2 102 0 3 1547 366 23 0 0 chrX 126186616 126186659 -40463637 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 1547 386 228 86 39 chrX 126186659 126186781 -40463515 + MTEb LTR MaLR 251 378 -1 3 1547 550 202 101 0 chrX 126186876 126186995 -40463301 + ID_B1 SINE B4 88 218 -6 3 1547 356 348 99 18 chrX 126187095 126187379 -40462917 - L1ME4a LINE L1 -164 5960 5654 3 1547 499 182 8 8 chrX 126187422 126187549 -40462747 - Lx9 LINE L1 -1 7643 7517 3 1547 3874 123 7 21 chrX 126187723 126188235 -40462061 - L1_Mus4 LINE L1 -6 6630 6127 3 1547 1079 97 0 0 chrX 126188235 126188380 -40461916 + B1_Mus2 SINE Alu 2 146 -1 3 1547 3874 123 7 21 chrX 126188380 126188480 -40461816 - L1_Mus4 LINE L1 -510 6126 6027 3 1547 214 362 43 0 chrX 126188798 126188892 -40461404 + PB1D7 SINE Alu 1 98 -22 3 1547 32 26 0 0 chrX 126188934 126188973 -40461323 + AT_rich Low_complexity Low_complexity 1 39 0 3 1547 376 275 128 0 chrX 126191826 126191935 -40458361 - ID_B1 SINE B4 0 224 102 3 1547 356 273 161 15 chrX 126191935 126191956 -40458340 - B1F1 SINE Alu 0 149 1 3 1547 938 280 19 53 chrX 126191975 126192239 -40458057 - Lx5 LINE L1 -1 7049 6795 3 1547 1550 272 60 0 chrX 126192237 126192667 -40457629 + Lx5 LINE L1 5811 6266 -784 3 1547 972 268 3 50 chrX 126192667 126192940 -40457356 - ORR1B1 LTR MaLR -170 224 1 3 1547 788 203 7 1 chrX 126192945 126193141 -40457155 + ORR1B1 LTR MaLR 251 394 0 3 1547 372 254 113 23 chrX 126193141 126193274 -40457022 + Lx5 LINE L1 6304 6448 -602 3 1547 332 213 33 197 chrX 126193247 126193399 -40456897 + L1VL1 LINE L1 236 362 -6060 3 1547 453 258 167 6 chrX 126193435 126193603 -40456693 + L1_Mus2 LINE L1 609 803 -5813 3 1547 22577 108 104 21 chrX 126193611 126197846 -40452450 + L1_Mus2 LINE L1 725 5303 -580 3 1547 6499 96 38 7 chrX 126198562 126199801 -40450495 + L1_Mus2 LINE L1 5288 6566 0 3 1547 294 95 0 0 chrX 126199846 126199888 -40450408 + (GGA)n Simple_repeat Simple_repeat 3 44 0 3 1547 944 119 0 6 chrX 126199888 126200048 -40450248 + (GAAA)n Simple_repeat Simple_repeat 4 162 0 3 1547 324 312 8 30 chrX 126200055 126200187 -40450109 + Lx6 LINE L1 6601 6729 -731 3 1547 25 31 0 0 chrX 126201199 126201231 -40449065 + AT_rich Low_complexity Low_complexity 1 32 0 3 1547 290 344 0 41 chrX 126201248 126201345 -40448951 - RSINE1 SINE B4 0 165 73 3 1547 4108 157 150 83 chrX 126201488 126201538 -40448758 - RLTR25B LTR ERVK -1 1027 994 3 1547 1122 76 14 0 chrX 126201538 126201683 -40448613 + B1_Mus2 SINE Alu 1 147 0 3 1547 4108 157 150 83 chrX 126201683 126202296 -40448000 - RLTR25B LTR ERVK -35 993 322 3 1547 2001 36 0 12 chrX 126202296 126202551 -40447745 - L1Md_F2 LINE L1 -4 6578 6327 3 1547 4108 157 150 83 chrX 126202551 126202839 -40447457 - RLTR25B LTR ERVK -707 321 13 3 1547 809 181 28 0 chrX 126203066 126203210 -40447086 - B1_Mur3 SINE Alu 0 149 2 3 1547 1142 290 52 21 chrX 126203312 126203856 -40446440 - Lx7 LINE L1 -111 7362 6781 3 1547 2918 68 11 70 chrX 126203867 126204312 -40445984 - BGLII LTR ERVK 0 421 3 3 1547 378 296 6 105 chrX 126204556 126204737 -40445559 + RSINE1 SINE B4 2 164 -1 3 1547 3386 310 66 20 chrX 126205014 126206329 -40443967 - Lx8 LINE L1 -35 7438 6063 3 1547 1950 142 12 3 chrX 126206376 126206700 -40443596 + RMER6D LTR ERVK 20 346 -374 3 1547 711 139 182 0 chrX 126206724 126206861 -40443435 + RMER6D LTR ERVK 555 716 -4 3 1547 1459 253 25 14 chrX 126206872 126207499 -40442797 - Lx7 LINE L1 -1655 5989 5315 3 1547 221 293 39 48 chrX 126207521 126207625 -40442671 + L2 LINE L2 2501 2603 -816 3 1547 15192 160 18 43 chrX 126207687 126208134 -40442162 + Lx LINE L1 2935 3386 -2497 3 1547 2651 82 90 0 chrX 126208134 126208511 -40441785 - RLTR10A LTR ERVK 0 411 1 3 1547 15192 144 18 30 chrX 126208511 126211842 -40438454 + Lx LINE L1 3387 6654 0 3 1547 332 250 0 24 chrX 126211871 126211953 -40438343 - PB1D10 SINE Alu 0 117 38 3 1547 988 256 80 4 chrX 126211977 126212240 -40438056 + ORR1D2 LTR MaLR 87 369 -1 3 1547 521 384 25 41 chrX 126212320 126212714 -40437582 + L2 LINE L2 2612 2999 -420 3 1547 296 283 10 10 chrX 126212751 126212851 -40437445 + (TATATG)n Simple_repeat Simple_repeat 5 104 0 3 1547 469 248 95 0 chrX 126212853 126212958 -40437338 - B4A SINE B4 -8 284 170 3 1547 3768 177 20 31 chrX 126212975 126213279 -40437017 - RMER6D LTR ERVK -13 707 401 3 1547 2793 61 0 3 chrX 126213279 126213626 -40436670 + ORR1A1 LTR MaLR 1 346 0 3 1547 3768 177 20 31 chrX 126213626 126214034 -40436262 - RMER6D LTR ERVK -320 400 3 3 1547 421 274 29 0 chrX 126214153 126214255 -40436041 - ID_B1 SINE B4 -41 183 79 3 1547 541 271 0 81 chrX 126215628 126215801 -40434495 + RSINE1 SINE B4 5 163 -2 3 1547 533 171 34 0 chrX 126215831 126215919 -40434377 + B1_Mur2 SINE Alu 3 93 -56 3 1547 417 206 4 0 chrX 126216331 126216414 -40433882 + B3A SINE B2 1 85 -110 3 1547 4677 109 6 101 chrX 126216445 126217339 -40432957 + RMER17D2 LTR ERVK 1 809 0 3 1547 495 0 0 0 chrX 126218204 126218259 -40432037 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 3 1547 936 146 43 0 chrX 126218261 126218425 -40431871 - B2_Mm2 SINE B2 -23 172 2 3 1547 250 341 62 39 chrX 126218735 126219071 -40431225 - L1ME3A LINE L1 -12 6161 5818 3 1547 558 287 95 21 chrX 126219088 126219394 -40430902 - L1ME3A LINE L1 -394 5768 5450 3 1547 501 299 6 77 chrX 126219520 126219676 -40430620 + ORR1E LTR MaLR 1 145 -214 3 1547 202 189 0 0 chrX 126219695 126219732 -40430564 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 3 1547 322 267 151 29 chrX 126219733 126219872 -40430424 - HAL1-3A_ME LINE L1 -419 2439 2284 3 1547 947 276 52 66 chrX 126220138 126220639 -40429657 + L1Md_F2 LINE L1 4635 5128 -1018 3 1547 250 351 21 0 chrX 126220670 126220764 -40429532 + PB1D10 SINE Alu 2 97 -20 3 1547 682 240 46 5 chrX 126220805 126221023 -40429273 + L1Md_F2 LINE L1 5170 5396 -750 3 1547 1340 68 17 0 chrX 126221024 126221200 -40429096 + B2_Mm1a SINE B2 1 179 -14 3 1547 309 269 232 14 chrX 126221371 126221582 -40428714 + L1MC3 LINE L1 5853 6109 -1676 3 1547 1752 52 0 3 chrX 126221573 126221800 -40428496 + L1Md_F2 LINE L1 5384 5607 -726 3 193 7550 60 18 7 chrX 126221808 126222789 -40427507 + L1Md_F2 LINE L1 5587 6578 -4 3 1548 7157 217 45 11 chrX 126222789 126224872 -40425424 + Lx6 LINE L1 5289 7456 -4 3 1548 594 312 53 127 chrX 126225003 126225568 -40424728 + RLTR26 LTR ERVK 120 642 0 3 1548 358 313 141 13 chrX 126225568 126225705 -40424591 + B3A SINE B2 24 179 -19 3 1548 252 59 0 0 chrX 126225705 126225739 -40424557 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1548 358 313 141 13 chrX 126225739 126225750 -40424546 + B3A SINE B2 180 190 -8 3 1548 382 311 0 10 chrX 126225788 126225892 -40424404 + PB1D10 SINE Alu 2 104 -13 3 1548 616 292 7 0 chrX 126225964 126226118 -40424178 + RSINE1 SINE B4 4 158 -7 3 1548 22 35 0 0 chrX 126226139 126226168 -40424128 + AT_rich Low_complexity Low_complexity 1 29 0 3 1548 720 190 139 39 chrX 126226327 126226535 -40423761 - ORR1C2 LTR MaLR 0 384 156 3 1548 672 211 99 70 chrX 126226527 126226772 -40423524 - ORR1D1 LTR MaLR -113 254 3 3 1548 360 0 0 0 chrX 126226846 126226886 -40423410 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1548 446 248 8 81 chrX 126226931 126227054 -40423242 - B1_Mur1 SINE Alu -5 144 31 3 1548 389 234 124 65 chrX 126227257 126227458 -40422838 - RLTR42-int LTR ERVK -3033 3104 2892 3 1548 369 317 109 33 chrX 126227523 126227882 -40422414 - RLTR42-int LTR ERVK -3243 2894 2509 3 1548 874 206 8 61 chrX 126227905 126228083 -40422213 - RLTR42-int LTR ERVK -3403 2119 1951 3 1548 2738 78 60 8 chrX 126228083 126228483 -40421813 + BGLII LTR ERVK 1 421 0 3 1548 874 206 8 61 chrX 126228483 126228568 -40421728 - RLTR42-int LTR ERVK -3572 1950 1870 3 1548 297 0 0 0 chrX 126229140 126229173 -40421123 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 1548 195 85 42 21 chrX 126229421 126229469 -40420827 + (CCCCCA)n Simple_repeat Simple_repeat 4 52 0 3 1548 2895 184 32 71 chrX 126229566 126229729 -40420567 + RMER6C LTR ERVK 4 137 -553 3 1548 1220 61 0 0 chrX 126229729 126229877 -40420419 - B1_Mus1 SINE Alu 0 148 1 3 1548 2895 184 32 71 chrX 126229877 126230428 -40419868 + RMER6C LTR ERVK 138 690 0 3 1548 246 113 55 27 chrX 126230876 126230949 -40419347 + (CAGA)n Simple_repeat Simple_repeat 2 76 0 3 1548 1068 219 52 102 chrX 126231586 126231987 -40418309 - RMER10A LTR ERVL -1 441 61 3 1548 294 56 0 0 chrX 126231987 126232023 -40418273 + L1Md_F2 LINE L1 5550 5585 -298 3 1548 8169 47 1 1 chrX 126232025 126233020 -40417276 + L1Md_F2 LINE L1 5588 6582 0 3 1548 449 182 13 13 chrX 126233025 126233103 -40417193 - RMER10A LTR ERVL -354 88 11 3 1548 369 0 0 0 chrX 126233241 126233282 -40417014 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1548 824 194 102 5 chrX 126235212 126235409 -40414887 - ORR1D2 LTR MaLR 0 370 155 3 1548 2032 85 81 3 chrX 126235418 126235714 -40414582 + ORR1A2 LTR MaLR 1 319 -8 3 1548 719 275 12 0 chrX 126235711 126235871 -40414425 - ORR1D2 LTR MaLR -192 167 6 3 1548 1273 259 45 59 chrX 126235973 126236413 -40413883 + RMER13B LTR ERVK 472 905 -3 3 1548 438 252 103 37 chrX 126236420 126236527 -40413769 - PB1D9 SINE Alu -1 119 6 3 1548 23 0 0 0 chrX 126236546 126236569 -40413727 + AT_rich Low_complexity Low_complexity 1 23 0 3 1548 318 219 13 40 chrX 126236588 126236664 -40413632 - RSINE1 SINE B4 -40 125 52 3 1548 585 0 0 0 chrX 126236858 126236923 -40413373 + (GA)n Simple_repeat Simple_repeat 1 65 0 3 1548 288 286 39 0 chrX 126237472 126237549 -40412747 - PB1D10 SINE Alu -11 106 27 3 1548 265 348 43 36 chrX 126237678 126237818 -40412478 + L2c LINE L2 3243 3383 -4 3 1548 1225 127 77 0 chrX 126238088 126238308 -40411988 - Lx2 LINE L1 0 6997 6761 3 1548 6436 120 18 12 chrX 126238293 126239684 -40410612 - Lx2 LINE L1 -352 6645 5245 3 1548 6155 101 28 4 chrX 126239683 126241484 -40408812 - L1VL4 LINE L1 -1713 1846 1 3 1548 1046 287 51 4 chrX 126242053 126242326 -40407970 - B4A SINE B4 -2 290 5 3 1548 1222 54 0 0 chrX 126242723 126242870 -40407426 + B1_Mm SINE Alu 1 147 0 3 1548 562 336 84 42 chrX 126243279 126243661 -40406635 + ORR1E LTR MaLR 6 384 0 4 1548 369 0 0 0 chrX 126245631 126245672 -40404624 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 1548 1107 84 0 0 chrX 126245672 126245815 -40404481 - B2_Mm2 SINE B2 -49 146 4 4 1548 398 205 26 0 chrX 126245883 126245961 -40404335 + B1_Mur2 SINE Alu 25 104 -45 4 1548 271 257 0 28 chrX 126245901 126245973 -40404323 + MT2B LTR ERVL 200 269 -332 4 1548 252 175 0 0 chrX 126245981 126246021 -40404275 - MT2A LTR ERVL -71 462 423 4 1548 264 366 32 16 chrX 126246234 126246359 -40403937 - MIR SINE MIR -120 142 16 4 1548 182 350 10 30 chrX 126246363 126246463 -40403833 + MER5B DNA MER1_type 1 98 -80 4 1548 547 246 9 97 chrX 126246755 126246971 -40403325 + B3A SINE B2 2 198 0 4 1548 217 160 0 74 chrX 126247024 126247078 -40403218 + B1_Mur4 SINE Alu 100 149 -1 4 1548 1319 58 0 23 chrX 126247250 126247267 -40403029 - B2_Mm1t SINE B2 -19 174 161 4 1548 207 0 0 0 chrX 126247267 126247290 -40403006 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 4 1548 1319 58 0 23 chrX 126247290 126247449 -40402847 - B2_Mm1t SINE B2 -33 160 2 4 1548 228 207 0 0 chrX 126247570 126247581 -40402715 + polypyrimidine Low_complexity Low_complexity 48 58 0 4 1548 243 0 0 0 chrX 126247581 126247608 -40402688 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 1548 228 207 0 0 chrX 126247608 126247654 -40402642 + CT-rich Low_complexity Low_complexity 2 47 0 4 1548 1047 98 7 0 chrX 126247729 126247872 -40402424 + B1_Mus1 SINE Alu 5 148 0 4 1548 250 30 0 0 chrX 126247872 126247917 -40402379 + L1_Mus2 LINE L1 6528 6565 -1 4 1548 234 329 60 47 chrX 126248072 126248222 -40402074 - MIR SINE MIR -33 229 78 4 1548 342 0 0 0 chrX 126249539 126249577 -40400719 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1548 300 200 0 0 chrX 126249586 126249661 -40400635 + (TA)n Simple_repeat Simple_repeat 1 75 0 4 1548 3204 32 0 0 chrX 126249848 126250226 -40400070 - L1Md_T LINE L1 0 6582 6205 4 1548 286 277 0 0 chrX 126250254 126250319 -40399977 - ID4_ SINE ID -18 65 1 4 1548 207 0 0 0 chrX 126250434 126250457 -40399839 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 1548 1120 81 0 13 chrX 126250457 126250597 -40399699 - B1_Mus1 SINE Alu -8 140 1 4 1548 514 309 155 21 chrX 126250600 126251128 -40399168 - L1ME1 LINE L1 -240 5939 5341 4 1548 21 0 0 0 chrX 126251203 126251224 -40399072 + AT_rich Low_complexity Low_complexity 1 21 0 4 1548 2630 253 38 102 chrX 126251692 126252563 -40397733 + RMER13B LTR ERVK 5 838 -70 4 1548 1196 42 7 0 chrX 126252563 126252707 -40397589 + B1_Mus1 SINE Alu 1 145 -3 4 1548 2630 253 38 102 chrX 126252707 126252800 -40397496 + RMER13B LTR ERVK 839 908 0 4 1548 1271 188 120 8 chrX 126253236 126253494 -40396802 - ORR1C2 LTR MaLR -2 382 96 4 1548 387 259 118 59 chrX 126253514 126253666 -40396630 - ORR1C2-int LTR MaLR -588 782 622 4 1548 424 333 30 30 chrX 126253716 126253849 -40396447 + ID_B1 SINE B4 87 219 -5 4 1548 369 0 0 0 chrX 126254469 126254510 -40395786 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 4 1548 1164 61 7 0 chrX 126254541 126254688 -40395608 - B1_Mus1 SINE Alu 0 148 1 4 1548 334 352 91 20 chrX 126254747 126254999 -40395297 - L2 LINE L2 -940 2479 2210 4 1548 2309 74 0 22 chrX 126255768 126256085 -40394211 - L1_Mus2 LINE L1 0 6566 6257 4 1548 472 215 2 59 chrX 126256217 126256376 -40393920 + Lx7 LINE L1 7559 7692 -4 4 1548 285 296 7 36 chrX 126257095 126257232 -40393064 + GA-rich Low_complexity Low_complexity 3 135 0 4 1548 262 296 56 64 chrX 126257289 126257538 -40392758 + L1M4 LINE L1 4748 4994 -1152 4 1548 763 313 49 58 chrX 126257560 126257987 -40392309 + Lx8 LINE L1 6896 7318 -155 4 1548 246 137 0 0 chrX 126257996 126258032 -40392264 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1548 1251 41 0 0 chrX 126258032 126258179 -40392117 - B1_Mus1 SINE Alu 0 148 2 4 1548 246 137 0 0 chrX 126258179 126258193 -40392103 + (T)n Simple_repeat Simple_repeat 1 14 0 4 1548 466 138 0 12 chrX 126258466 126258547 -40391749 - Lx2B LINE L1 -263 6737 6658 4 1548 2261 171 25 14 chrX 126258556 126258990 -40391306 - Lx2 LINE L1 0 6997 6559 4 1548 417 111 0 27 chrX 126258990 126259064 -40391232 + MusHAL1 LINE L1 1468 1539 -1173 4 1548 376 166 140 33 chrX 126259049 126259199 -40391097 - Lx7 LINE L1 -163 7533 7368 4 1548 1574 32 11 0 chrX 126259242 126259429 -40390867 + B2_Mm1a SINE B2 1 189 -4 4 1548 2546 252 24 99 chrX 126259497 126259635 -40390661 + L1Md_F LINE L1 313 445 -6193 4 1548 3280 46 2 2 chrX 126259635 126260031 -40390265 - MTA_Mm LTR MaLR 0 396 1 4 1548 2546 239 31 73 chrX 126260031 126260145 -40390151 + L1Md_F LINE L1 404 513 -6121 4 1548 286 42 42 0 chrX 126260145 126260193 -40390103 + (CAA)n Simple_repeat Simple_repeat 2 51 0 4 1548 9612 123 16 10 chrX 126260193 126262412 -40387884 + L1Md_F LINE L1 514 2716 -3167 4 1548 4629 87 6 0 chrX 126262418 126263186 -40387110 + L1_Mus3 LINE L1 5476 6247 -391 4 1548 304 292 22 11 chrX 126263573 126263663 -40386633 + B1_Mur4 SINE Alu 8 98 -52 4 1548 454 260 23 61 chrX 126263947 126264078 -40386218 + B1_Mur3 SINE Alu 18 143 -6 4 1548 2116 237 36 53 chrX 126264214 126265093 -40385203 + MYSERV16_I-int LTR ERVK 2 740 -1586 4 1548 343 291 60 54 chrX 126265145 126265294 -40385002 + RMER4A LTR ERVK 270 419 -47 4 1548 1495 216 29 93 chrX 126265298 126265920 -40384376 + MYSERV16_I-int LTR ERVK 1043 1624 -702 4 1548 3167 140 33 49 chrX 126265921 126266383 -40383913 + RLTR20A LTR ERVK 1 439 -102 4 1548 360 0 0 0 chrX 126266383 126266423 -40383873 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1548 3167 140 33 49 chrX 126266423 126266508 -40383788 + RLTR20A LTR ERVK 440 537 -4 4 1548 1939 175 66 10 chrX 126266511 126266996 -40383300 + MYSERV6-int LTR ERVK 8274 8785 -174 4 1548 339 65 0 0 chrX 126266996 126267042 -40383254 - MT2B2 LTR ERVL 0 584 539 4 1548 6861 124 28 12 chrX 126267042 126268131 -40382165 - MERVL_2A-int LTR ERVL -3832 1929 824 4 1548 2289 202 9 73 chrX 126268133 126268709 -40381587 - MERVL_2A-int LTR ERVL -4942 543 5 4 1548 570 93 144 0 chrX 126268709 126268806 -40381490 - MT2B2 LTR ERVL -179 405 295 4 1548 4928 164 82 62 chrX 126268811 126269256 -40381040 - L1_Mur3 LINE L1 -3322 2558 2081 4 1548 584 93 0 10 chrX 126269256 126269354 -40380942 + (TG)n Simple_repeat Simple_repeat 1 97 0 4 1548 4928 164 82 62 chrX 126269354 126270015 -40380281 - L1_Mur3 LINE L1 -3800 2080 1437 4 1548 297 0 0 0 chrX 126270015 126270048 -40380248 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 1548 4928 150 32 37 chrX 126270048 126270285 -40380011 - L1_Mur3 LINE L1 -4444 1436 1187 4 1548 1783 186 31 75 chrX 126270285 126270709 -40379587 + BGLII_A LTR ERVK 1 405 -40 4 1548 279 200 36 0 chrX 126271594 126271649 -40378647 - MER5A DNA MER1_type -5 184 128 4 1548 23 0 0 0 chrX 126271689 126271712 -40378584 + AT_rich Low_complexity Low_complexity 1 23 0 4 1548 763 285 16 21 chrX 126271727 126271917 -40378379 + ID_B1 SINE B4 32 220 -4 4 1548 336 211 0 78 chrX 126271925 126272002 -40378294 + B3 SINE B2 1 71 -145 4 1548 2123 122 46 27 chrX 126272000 126272372 -40377924 - RMER17A2 LTR ERVK -527 379 1 4 1548 253 364 53 91 chrX 126272916 126273179 -40377117 + ORR1E LTR MaLR 66 318 -41 4 1548 207 0 0 0 chrX 126273185 126273208 -40377088 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 1548 729 50 101 0 chrX 126273594 126273693 -40376603 + BC1_Mm scRNA scRNA 1 109 -43 4 1548 300 205 63 13 chrX 126273760 126273839 -40376457 - MARNA DNA Mariner -350 236 154 4 1548 1067 164 113 10 chrX 126274439 126274642 -40375654 + URR1B DNA MER1_type 1 224 -1 4 1548 382 345 8 0 chrX 126274701 126274820 -40375476 - PB1D9 SINE Alu 0 120 1 4 1548 275 283 0 132 chrX 126274735 126274841 -40375455 - MT2B LTR ERVL -361 240 149 4 1548 1588 164 25 7 chrX 126274973 126275255 -40375041 + Lx4B LINE L1 6772 7058 0 4 1548 830 246 12 0 chrX 126275900 126276071 -40374225 - ID_B1 SINE B4 0 224 52 4 1548 182 341 83 23 chrX 126276111 126276243 -40374053 + L2 LINE L2 2799 2938 -481 4 1548 227 326 20 31 chrX 126276803 126276901 -40373395 + Tigger1 DNA MER2_type 803 899 -1519 4 1548 325 268 26 35 chrX 126277038 126277161 -40373135 + PB1D10 SINE Alu 31 148 -1 4 1548 5643 206 38 59 chrX 126277194 126278522 -40371774 + Lx7 LINE L1 6396 7696 0 4 1548 339 330 25 25 chrX 126278669 126278790 -40371506 + RSINE1 SINE B4 2 122 -43 4 1548 387 0 0 0 chrX 126278796 126278839 -40371457 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1548 186 43 0 0 chrX 126279283 126279306 -40370990 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 4 1548 1511 193 165 14 chrX 126279739 126280096 -40370200 - MTD LTR MaLR -8 411 1 4 1548 333 345 26 0 chrX 126280140 126280253 -40370043 - B1F SINE Alu -27 122 7 4 1548 2828 87 14 9 chrX 126280396 126280815 -40369481 - BGLII LTR ERVK 0 421 1 4 1548 518 323 124 28 chrX 126280815 126281169 -40369127 + Tigger9a DNA Tigger 54 441 -291 4 1548 374 237 159 71 chrX 126281224 126281273 -40369023 + Tigger9a DNA Tigger 535 583 -149 4 1548 186 71 0 0 chrX 126281273 126281301 -40368995 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 4 1548 374 237 159 71 chrX 126281301 126281433 -40368863 + Tigger9a DNA Tigger 584 732 0 4 1548 219 125 0 0 chrX 126282129 126282169 -40368127 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 1548 660 144 35 18 chrX 126282169 126282272 -40368024 - B1_Mur1 SINE Alu -8 141 35 4 1548 585 0 0 0 chrX 126283951 126284016 -40366280 + (TC)n Simple_repeat Simple_repeat 2 66 0 4 1548 233 211 0 17 chrX 126284525 126284583 -40365713 + (CGG)n Simple_repeat Simple_repeat 2 58 0 4 1548 592 218 1 0 chrX 126286058 126286194 -40364102 - B1_Mur2 SINE Alu 0 149 13 4 1548 396 0 0 0 chrX 126286792 126286836 -40363460 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 4 1548 1146 70 32 0 chrX 126286837 126286993 -40363303 - B2_Mm2 SINE B2 -34 161 1 4 1548 573 55 0 0 chrX 126287608 126287681 -40362615 + (TCCA)n Simple_repeat Simple_repeat 4 76 0 4 1548 588 308 37 37 chrX 126287957 126288230 -40362066 + B4 SINE B4 2 274 -18 4 1548 291 54 0 0 chrX 126288302 126288339 -40361957 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1548 265 43 0 61 chrX 126288497 126288546 -40361750 + (TTTTTG)n Simple_repeat Simple_repeat 5 50 0 5 1548 1181 48 0 14 chrX 126288546 126288694 -40361602 - B1_Mus2 SINE Alu 0 147 2 5 1548 352 316 84 0 chrX 126288923 126289018 -40361278 + PB1D10 SINE Alu 2 104 -13 5 1548 259 25 0 48 chrX 126289018 126289060 -40361236 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 5 1548 239 280 89 137 chrX 126289060 126289086 -40361210 + B4A SINE B4 173 202 -90 5 1548 666 210 42 0 chrX 126289170 126289313 -40360983 - B1_Mur4 SINE Alu -1 149 1 5 1548 902 83 15 0 chrX 126289333 126289465 -40360831 + (TTTC)n Simple_repeat Simple_repeat 1 134 0 5 1548 865 259 10 5 chrX 126289466 126289668 -40360628 - B3 SINE B2 -10 206 4 5 1548 214 394 44 20 chrX 126289853 126290104 -40360192 - L2 LINE L2 -433 2986 2730 5 1548 1251 156 9 13 chrX 126290315 126290542 -40359754 - URR1A DNA MER1_type 0 226 1 5 1548 832 291 18 0 chrX 126290803 126291023 -40359273 - ID_B1 SINE B4 0 224 1 5 1548 458 272 0 25 chrX 126291575 126291695 -40358601 - PB1 SINE Alu -92 219 24 5 1548 274 345 12 0 chrX 126291815 126291899 -40358397 + BC1_Mm scRNA scRNA 1 85 -67 5 1548 927 226 5 33 chrX 126292135 126292350 -40357946 - B3 SINE B2 -6 210 2 5 1548 5593 54 22 1 chrX 126293326 126294100 -40356196 - MusHAL1 LINE L1 -1922 790 1 5 1548 1355 65 5 61 chrX 126294112 126294308 -40355988 - B2_Mm1t SINE B2 -7 186 2 5 1548 8484 35 0 3 chrX 126294311 126295481 -40354815 - L1Md_F3 LINE L1 0 6584 5418 5 1548 4963 106 109 0 chrX 126295480 126296226 -40354070 - L1VL2 LINE L1 -5444 891 65 5 1548 25 0 0 0 chrX 126296747 126296772 -40353524 + AT_rich Low_complexity Low_complexity 1 25 0 5 1548 556 258 23 0 chrX 126296805 126296933 -40353363 - B3A SINE B2 -66 132 2 5 1548 243 265 42 42 chrX 126298290 126298361 -40351935 + MIR3 SINE MIR 93 163 -45 5 1548 21 36 0 0 chrX 126298476 126298504 -40351792 + AT_rich Low_complexity Low_complexity 1 28 0 5 1548 733 296 86 51 chrX 126298928 126299361 -40350935 - LTR40c LTR ERVL -2 460 5 5 1548 1215 223 118 15 chrX 126300684 126301016 -40349280 - ORR1D2 LTR MaLR -2 368 3 5 1548 613 275 121 5 chrX 126301149 126301339 -40348957 + MER20 DNA MER1_type 1 212 -7 5 1548 525 264 0 0 chrX 126301738 126301848 -40348448 - PB1D10 SINE Alu -1 116 7 5 1548 225 325 180 23 chrX 126302748 126302965 -40347331 - L2c LINE L2 -47 3340 3090 5 1548 447 326 185 24 chrX 126303336 126303634 -40346662 - MLT1A0 LTR MaLR 0 365 20 5 1548 195 222 0 0 chrX 126304752 126304797 -40345499 + (TATATG)n Simple_repeat Simple_repeat 6 50 0 5 1548 28 29 0 0 chrX 126305531 126305566 -40344730 + AT_rich Low_complexity Low_complexity 1 35 0 5 1548 357 24 0 0 chrX 126305769 126305811 -40344485 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1548 486 0 0 0 chrX 126305811 126305864 -40344432 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 1548 357 24 0 0 chrX 126307492 126307534 -40342762 + (TCCC)n Simple_repeat Simple_repeat 3 44 0 5 1548 264 275 21 32 chrX 126308738 126308832 -40341464 + CT-rich Low_complexity Low_complexity 4 96 0 5 1548 529 335 14 32 chrX 126308834 126309053 -40341243 - ID_B1 SINE B4 -8 216 2 5 1548 584 327 135 34 chrX 126309526 126310029 -40340267 + Tigger13a DNA MER2_type 163 716 -55 5 1548 352 277 21 11 chrX 126310579 126310674 -40339622 - PB1D10 SINE Alu -12 105 10 5 1548 396 290 100 0 chrX 126311227 126311327 -40338969 + PB1D10 SINE Alu 8 117 0 5 1548 810 208 174 5 chrX 126311379 126311563 -40338733 + B3 SINE B2 2 216 0 5 1548 225 318 13 26 chrX 126311948 126312100 -40338196 - HAL1 LINE L1 -113 2394 2245 5 1548 264 210 72 24 chrX 126312683 126312766 -40337530 - L1MC2 LINE L1 0 6344 6258 5 1548 383 328 17 8 chrX 126312773 126312890 -40337406 - B4A SINE B4 -173 119 2 5 1548 29 28 0 0 chrX 126312986 126313022 -40337274 + AT_rich Low_complexity Low_complexity 1 36 0 5 1548 201 39 0 0 chrX 126313056 126313082 -40337214 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 5 1548 486 242 53 8 chrX 126313087 126313220 -40337076 - B1_Mur1 SINE Alu -8 141 3 5 1548 1211 27 0 7 chrX 126313230 126313377 -40336919 - B1_Mus2 SINE Alu 0 147 2 5 1548 1383 217 77 41 chrX 126313587 126313930 -40336366 - ORR1D1 LTR MaLR -23 351 7 5 1548 708 243 151 22 chrX 126314093 126314278 -40336018 - B3 SINE B2 -6 210 2 5 1548 23 54 0 0 chrX 126314836 126314873 -40335423 + AT_rich Low_complexity Low_complexity 1 37 0 5 1548 303 161 0 0 chrX 126314926 126314982 -40335314 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 1548 333 0 0 0 chrX 126315723 126315760 -40334536 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1548 306 0 0 0 chrX 126315760 126315793 -40334503 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 1548 786 201 161 0 chrX 126315901 126316075 -40334221 + B3 SINE B2 1 202 -14 5 1548 706 125 14 0 chrX 126317137 126317281 -40333015 + (GA)n Simple_repeat Simple_repeat 2 147 0 5 1548 288 179 0 0 chrX 126317671 126317749 -40332547 + CT-rich Low_complexity Low_complexity 2 79 0 5 1548 24 32 0 0 chrX 126318405 126318436 -40331860 + AT_rich Low_complexity Low_complexity 1 31 0 5 1548 280 221 191 0 chrX 126318980 126319048 -40331248 + MIR SINE MIR 155 235 -27 5 1548 204 246 49 0 chrX 126319217 126319278 -40331018 + CT-rich Low_complexity Low_complexity 1 64 0 5 1548 204 40 0 0 chrX 126319543 126319568 -40330728 + (TGG)n Simple_repeat Simple_repeat 1 25 0 5 1548 233 211 19 19 chrX 126320501 126320554 -40329742 - MamRep1161 DNA TcMar -831 126 74 5 1548 189 0 0 0 chrX 126321027 126321048 -40329248 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1548 240 287 17 100 chrX 126322919 126323039 -40327257 + PB1D10 SINE Alu 3 112 -5 5 1548 223 263 168 20 chrX 126323467 126323568 -40326728 + MIRb SINE MIR 145 260 -8 5 1548 1828 154 12 22 chrX 126323706 126324025 -40326271 - MTC LTR MaLR -2 419 104 5 1548 474 278 50 31 chrX 126324025 126324185 -40326111 + Lx5 LINE L1 6870 7032 -18 5 1548 25 51 0 0 chrX 126324185 126324224 -40326072 + AT_rich Low_complexity Low_complexity 1 39 0 5 1548 720 138 0 0 chrX 126324250 126324359 -40325937 - MTB_Mm LTR MaLR -298 109 1 5 1548 217 245 38 0 chrX 126324461 126324514 -40325782 - PB1 SINE Alu -4 123 69 5 1548 248 386 70 8 chrX 126324536 126324664 -40325632 + MER46C DNA MER2_type 199 334 -4 5 1548 213 121 0 0 chrX 126324688 126324721 -40325575 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 5 1548 23 33 0 0 chrX 126326039 126326069 -40324227 + AT_rich Low_complexity Low_complexity 1 30 0 5 1548 195 129 0 0 chrX 126326111 126326142 -40324154 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 5 1548 228 35 0 0 chrX 126327155 126327184 -40323112 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 5 1548 248 320 12 25 chrX 126328076 126328156 -40322140 - ID4 SINE ID -3 80 2 5 1548 465 276 43 60 chrX 126328593 126328778 -40321518 - B3A SINE B2 -16 182 1 5 1548 524 336 118 68 chrX 126329357 126329493 -40320803 - L2a LINE L2 -2 3424 3280 5 1548 335 257 0 0 chrX 126329493 126329563 -40320733 + ID4_ SINE ID 4 73 -10 5 1548 584 324 133 41 chrX 126329563 126330113 -40320183 - L2a LINE L2 -147 3279 2678 5 1548 302 154 0 19 chrX 126330117 126330170 -40320126 - HAL1-3A_ME LINE L1 -831 2027 1976 5 1548 13919 60 3 3 chrX 126330478 126332960 -40317336 - L1Md_F2 LINE L1 -2 6580 4099 5 1548 1033 100 0 0 chrX 126333383 126333523 -40316773 - B1_Mus1 SINE Alu 0 148 9 5 1548 299 85 21 0 chrX 126333608 126333655 -40316641 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1548 407 328 60 46 chrX 126333674 126333955 -40316341 - B4A SINE B4 -7 285 1 5 1548 4006 103 7 33 chrX 126334181 126334795 -40315501 - L1_Mus3 LINE L1 -3 6635 6038 5 1548 828 69 0 0 chrX 126335490 126335606 -40314690 - L1_Mus2 LINE L1 -1 6565 6450 5 1548 467 265 43 57 chrX 126336197 126336337 -40313959 + B1F1 SINE Alu 1 138 -11 5 1548 185 333 0 23 chrX 126337154 126337240 -40313056 + MIR3 SINE MIR 123 206 -2 5 1548 277 319 8 25 chrX 126339800 126339919 -40310377 - MTD LTR MaLR -297 122 6 5 1548 406 269 106 20 chrX 126339927 126340181 -40310115 + L1MA8 LINE L1 5985 6260 -31 5 1548 37727 14 1 8 chrX 126340635 126345852 -40304444 + L1Md_A LINE L1 408 5586 -297 5 1548 8704 18 0 0 chrX 126345854 126346848 -40303448 + L1Md_A LINE L1 5589 6582 0 5 1548 434 234 132 29 chrX 126347492 126347634 -40302662 + B1_Mur1 SINE Alu 1 146 -3 5 1548 384 161 15 30 chrX 126349054 126349188 -40301108 + (CAGAGA)n Simple_repeat Simple_repeat 1 132 0 5 1548 252 59 0 0 chrX 126349490 126349524 -40300772 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1548 25 0 0 0 chrX 126349792 126349817 -40300479 + AT_rich Low_complexity Low_complexity 1 25 0 5 1548 883 272 0 14 chrX 126349913 126350122 -40300174 + B3 SINE B2 3 208 -8 5 1548 526 287 39 0 chrX 126350825 126350954 -40299342 - B1F SINE Alu -7 142 9 5 1548 1851 296 118 29 chrX 126351044 126352101 -40298195 - Charlie7 DNA MER1_type -1345 1267 117 5 1548 1706 21 0 0 chrX 126352249 126352441 -40297855 + B2_Mm1a SINE B2 1 192 -1 5 1548 387 0 0 0 chrX 126353029 126353072 -40297224 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1549 1041 153 53 0 chrX 126353749 126353938 -40296358 + URR1A DNA MER1_type 27 225 -1 5 1549 1087 112 11 6 chrX 126353962 126354141 -40296155 - L1_Mus3 LINE L1 -4 6634 6455 6 1549 203 244 0 0 chrX 126355195 126355236 -40295060 + CT-rich Low_complexity Low_complexity 2 42 0 6 1549 447 106 0 0 chrX 126355238 126355304 -40294992 + (CA)n Simple_repeat Simple_repeat 2 67 0 6 1549 201 147 0 0 chrX 126355474 126355508 -40294788 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1549 396 57 0 0 chrX 126361337 126361371 -40288925 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 1549 471 35 0 0 chrX 126361371 126361428 -40288868 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1549 396 57 0 0 chrX 126361428 126361446 -40288850 + (TA)n Simple_repeat Simple_repeat 2 19 0 6 1549 180 0 0 0 chrX 126361446 126361466 -40288830 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 1549 548 260 69 23 chrX 126361466 126361596 -40288700 - RSINE1 SINE B4 -26 139 4 6 1549 357 43 0 0 chrX 126363682 126363729 -40286567 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1549 289 237 13 26 chrX 126364109 126364187 -40286109 + MT2B LTR ERVL 160 236 -365 6 1549 422 276 0 20 chrX 126364121 126364221 -40286075 + PB1D9 SINE Alu 18 115 -5 6 1549 235 304 29 19 chrX 126364262 126364366 -40285930 - PB1D10 SINE Alu -12 105 1 6 1549 830 287 87 39 chrX 126364839 126365195 -40285101 - L2a LINE L2 -100 3326 2954 6 1549 26 0 0 0 chrX 126367616 126367642 -40282654 + AT_rich Low_complexity Low_complexity 1 26 0 6 1549 200 212 0 0 chrX 126367645 126367678 -40282618 + L2c LINE L2 3287 3319 -68 6 1549 594 0 0 0 chrX 126368059 126368125 -40282171 + (TTCC)n Simple_repeat Simple_repeat 4 69 0 6 1549 203 337 52 21 chrX 126368659 126368756 -40281540 + MIRb SINE MIR 22 121 -147 6 1549 660 87 0 0 chrX 126369358 126369450 -40280846 + (TTTC)n Simple_repeat Simple_repeat 3 94 0 6 1549 1296 262 44 103 chrX 126369613 126369826 -40280470 + MTD LTR MaLR 2 210 -209 6 1549 3519 60 11 0 chrX 126369826 126370275 -40280021 + L1_Mus1 LINE L1 6112 6565 -2 6 1549 1296 262 44 103 chrX 126370275 126370490 -40279806 + MTD LTR MaLR 211 405 -14 6 1549 32 43 0 0 chrX 126371319 126371365 -40278931 + AT_rich Low_complexity Low_complexity 1 46 0 6 1549 1773 27 14 5 chrX 126371365 126371585 -40278711 - L1Md_F3 LINE L1 -16 6568 6347 6 1549 604 52 0 0 chrX 126371585 126371662 -40278634 + L1Md_F3 LINE L1 6270 6346 -236 6 1549 3155 48 8 5 chrX 126371760 126372155 -40278141 - MTA_Mm LTR MaLR 0 396 1 6 1549 597 290 180 35 chrX 126372398 126372820 -40277476 - L1MC4 LINE L1 -464 7578 7096 6 1549 657 338 84 52 chrX 126372981 126373290 -40277006 + ORR1E LTR MaLR 34 352 -7 6 1549 5977 81 16 11 chrX 126373776 126374093 -40276203 - L1_Mus1 LINE L1 0 6567 6257 6 1549 3341 38 2 2 chrX 126374093 126374489 -40275807 - MTA_Mm LTR MaLR 0 396 1 6 1549 5977 81 16 11 chrX 126374489 126375003 -40275293 - L1_Mus1 LINE L1 -311 6256 5732 6 1549 217 333 0 0 chrX 126375313 126375370 -40274926 + RSINE1 SINE B4 81 137 -28 6 1549 260 160 27 0 chrX 126375378 126375453 -40274843 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 0 6 1549 22 0 0 0 chrX 126377031 126377053 -40273243 + AT_rich Low_complexity Low_complexity 1 22 0 6 1549 420 20 0 0 chrX 126377766 126377815 -40272481 + (ATG)n Simple_repeat Simple_repeat 3 51 0 6 1549 375 190 65 33 chrX 126378742 126378874 -40271422 + Lx5 LINE L1 6909 7053 -5 6 1549 486 0 0 0 chrX 126378929 126378983 -40271313 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 1549 350 357 53 108 chrX 126378983 126379212 -40271084 - MER68 LTR ERVL -125 438 232 6 1549 1265 102 17 0 chrX 126379212 126379389 -40270907 + B2_Mm2 SINE B2 2 181 -14 6 1549 350 357 53 108 chrX 126379389 126379614 -40270682 - MER68 LTR ERVL -332 231 9 6 1549 24 0 0 0 chrX 126380107 126380131 -40270165 + AT_rich Low_complexity Low_complexity 1 24 0 6 1549 463 278 151 17 chrX 126380482 126380720 -40269576 + Tigger15a DNA TcMar 326 595 -120 6 1549 259 362 46 66 chrX 126381323 126381474 -40268822 - MIRb SINE MIR -28 240 93 6 1549 231 281 35 0 chrX 126382151 126382208 -40268088 + Tigger16b DNA Tigger 274 332 -5 6 1549 1005 310 60 40 chrX 126383017 126383387 -40266909 - MTEa LTR MaLR 0 379 3 6 1549 225 210 0 0 chrX 126383593 126383655 -40266641 + (CCA)n Simple_repeat Simple_repeat 3 64 0 6 1549 226 278 0 36 chrX 126383905 126383961 -40266335 + ID_B1 SINE B4 103 156 -68 6 1549 620 307 103 35 chrX 126385070 126385418 -40264878 - MLT1A LTR MaLR -2 372 1 6 1549 661 331 86 21 chrX 126385584 126385921 -40264375 - MLT1A0 LTR MaLR 0 365 1 6 1549 800 182 0 45 chrX 126386006 126386161 -40264135 + B1_Mur3 SINE Alu 2 149 0 6 1549 701 158 16 155 chrX 126386596 126386714 -40263582 - URR1B DNA MER1_type 0 225 108 6 1549 6799 55 3 7 chrX 126386714 126387585 -40262711 + L1Md_F2 LINE L1 5703 6570 -12 6 1549 701 158 16 155 chrX 126387585 126387653 -40262643 - URR1B DNA MER1_type -118 107 65 6 1549 767 282 57 41 chrX 126387804 126388244 -40262052 - L1MEc LINE L1 -5940 460 14 6 1549 1280 57 90 0 chrX 126390146 126390163 -40260133 - B2_Mm1t SINE B2 0 193 177 6 1549 207 0 0 0 chrX 126390163 126390186 -40260110 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 6 1549 1280 57 90 0 chrX 126390186 126390345 -40259951 - B2_Mm1t SINE B2 -17 176 2 6 1549 722 196 7 34 chrX 126390393 126390541 -40259755 - B1_Mur3 SINE Alu -5 144 1 6 1549 2095 88 13 7 chrX 126390962 126391271 -40259025 + L1_Mus4 LINE L1 6313 6623 -13 6 1549 21 71 0 0 chrX 126392180 126392222 -40258074 + AT_rich Low_complexity Low_complexity 1 42 0 6 1549 21 0 0 0 chrX 126393513 126393534 -40256762 + AT_rich Low_complexity Low_complexity 1 21 0 6 1549 672 303 31 67 chrX 126393967 126394222 -40256074 + B4A SINE B4 29 274 -18 6 1549 294 211 228 120 chrX 126395311 126395478 -40254818 + B3 SINE B2 2 186 -9 6 1549 442 301 150 15 chrX 126395765 126396092 -40254204 - L1MB1 LINE L1 -16 6152 5782 6 1549 328 282 53 53 chrX 126396089 126396239 -40254057 - L1MB1 LINE L1 -1232 4908 4759 6 1549 711 292 67 38 chrX 126396976 126397289 -40253007 - MER44A DNA MER2_type -16 323 2 6 1549 368 343 22 29 chrX 126397831 126397969 -40252327 + B1_Mur1 SINE Alu 1 137 -12 6 1549 305 275 43 80 chrX 126398621 126398783 -40251513 + L1ME4a LINE L1 5966 6121 -3 6 1549 23 0 0 0 chrX 126399138 126399161 -40251135 + AT_rich Low_complexity Low_complexity 1 23 0 6 1549 189 0 0 0 chrX 126399669 126399690 -40250606 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1549 616 240 0 16 chrX 126400764 126400891 -40249405 - B1_Mur2 SINE Alu 0 149 25 6 1549 215 169 50 38 chrX 126401458 126401538 -40248758 + CT-rich Low_complexity Low_complexity 3 83 0 6 1549 701 284 171 13 chrX 126402285 126402524 -40247772 - B4 SINE B4 -9 283 7 6 1549 249 312 21 21 chrX 126402971 126403066 -40247230 - Charlie1 DNA MER1_type -2542 239 145 6 1549 206 347 10 30 chrX 126403599 126403700 -40246596 + L2b LINE L2 3055 3153 -222 6 1549 491 303 50 22 chrX 126403818 126404000 -40246296 + MIR SINE MIR 4 190 -72 6 1549 564 238 62 81 chrX 126404012 126404376 -40245920 - MTE2b LTR MaLR 0 379 37 6 1549 338 345 60 20 chrX 126404696 126404873 -40245423 - MLT1I LTR MaLR -239 205 16 6 1549 1317 51 17 11 chrX 126404979 126405153 -40245143 + B2_Mm2 SINE B2 2 177 -18 6 1549 180 0 0 0 chrX 126405153 126405173 -40245123 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 6 1549 21 0 0 0 chrX 126405256 126405277 -40245019 + AT_rich Low_complexity Low_complexity 1 21 0 6 1549 262 302 11 11 chrX 126405829 126405916 -40244380 + (TG)n Simple_repeat Simple_repeat 1 87 0 6 1549 432 0 0 0 chrX 126405978 126406026 -40244270 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1549 206 105 0 26 chrX 126406311 126406350 -40243946 + (GGGAGA)n Simple_repeat Simple_repeat 2 39 0 6 1549 336 222 0 0 chrX 126406351 126406414 -40243882 - ID2 SINE ID -10 73 11 6 1549 24 0 0 0 chrX 126406919 126406943 -40243353 + AT_rich Low_complexity Low_complexity 1 24 0 6 1549 25 0 0 0 chrX 126407052 126407077 -40243219 + AT_rich Low_complexity Low_complexity 1 25 0 6 1549 305 42 0 77 chrX 126407143 126407195 -40243101 + (TAATG)n Simple_repeat Simple_repeat 1 48 0 6 1549 259 352 126 29 chrX 126409175 126409288 -40241008 - Lx8 LINE L1 -2 7471 7344 6 1549 681 76 0 0 chrX 126409288 126409380 -40240916 + (CA)n Simple_repeat Simple_repeat 2 93 0 6 1549 259 352 126 29 chrX 126409380 126409576 -40240720 - Lx8 LINE L1 -130 7343 7132 6 1549 806 244 176 22 chrX 126409642 126409915 -40240381 - Lx8 LINE L1 -110 7363 7049 6 1549 434 49 16 0 chrX 126411426 126411487 -40238809 + (TA)n Simple_repeat Simple_repeat 2 63 0 6 1549 405 0 0 0 chrX 126411487 126411531 -40238765 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1549 1185 272 19 3 chrX 126412280 126412594 -40237702 - MER33 DNA MER1_type -5 319 1 6 1549 233 260 109 50 chrX 126414410 126414511 -40235785 - MIRb SINE MIR -117 151 45 6 1549 600 346 40 18 chrX 126416601 126416878 -40233418 - Lx8 LINE L1 -216 7257 6975 6 1549 4287 55 9 0 chrX 126416944 126417474 -40232822 - L1Md_F2 LINE L1 -106 6476 5942 6 1549 26 30 0 0 chrX 126418761 126418794 -40231502 + AT_rich Low_complexity Low_complexity 1 33 0 6 1549 632 306 37 27 chrX 126419081 126419269 -40231027 + B3A SINE B2 2 191 -7 6 1549 22 0 0 0 chrX 126419358 126419380 -40230916 + AT_rich Low_complexity Low_complexity 1 22 0 6 1549 922 157 61 44 chrX 126419656 126419836 -40230460 - ORR1B2 LTR MaLR 0 367 185 6 1549 22 0 0 0 chrX 126421088 126421110 -40229186 + AT_rich Low_complexity Low_complexity 1 22 0 6 1549 355 326 20 0 chrX 126421553 126421651 -40228645 - L2c LINE L2 -220 3167 3068 6 1549 447 134 0 0 chrX 126423010 126423092 -40227204 + (TA)n Simple_repeat Simple_repeat 2 83 0 6 1549 225 302 24 32 chrX 126423161 126423284 -40227012 - Lx9 LINE L1 -172 7472 7351 6 1549 297 0 0 0 chrX 126423997 126424030 -40226266 + (TA)n Simple_repeat Simple_repeat 2 34 0 6 1549 2050 173 24 37 chrX 126424261 126424644 -40225652 - ORR1C1 LTR MaLR 0 378 1 6 1549 303 336 18 26 chrX 126425068 126425181 -40225115 + PB1D7 SINE Alu 9 120 0 6 1549 208 317 12 47 chrX 126425249 126425335 -40224961 + L2c LINE L2 3291 3373 -14 7 1549 1528 45 15 0 chrX 126425418 126425620 -40224676 + L1Md_F2 LINE L1 6378 6582 0 7 1549 298 279 52 91 chrX 126426150 126426458 -40223838 + Lx9 LINE L1 7349 7644 0 7 1549 366 68 0 0 chrX 126426772 126426831 -40223465 + Lx LINE L1 6592 6650 -4 7 1549 290 328 59 15 chrX 126426916 126427052 -40223244 + MIRb SINE MIR 85 226 -42 7 1549 337 314 0 0 chrX 126427076 126427178 -40223118 + PB1D10 SINE Alu 9 110 -7 7 1549 22 0 0 0 chrX 126429115 126429137 -40221159 + AT_rich Low_complexity Low_complexity 1 22 0 7 1549 634 242 111 20 chrX 126429144 126429342 -40220954 - B3 SINE B2 0 216 1 7 1549 574 281 1 0 chrX 126429355 126429496 -40220800 - B1_Mur1 SINE Alu -8 142 1 7 1549 557 286 107 43 chrX 126429502 126429927 -40220369 - L1MA8 LINE L1 0 6291 5840 7 1549 340 349 59 24 chrX 126430409 126430579 -40219717 + MIRb SINE MIR 3 178 -90 7 1549 183 42 0 0 chrX 126430602 126430626 -40219670 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1549 21 0 0 0 chrX 126432037 126432058 -40218238 + AT_rich Low_complexity Low_complexity 1 21 0 7 1549 4707 131 7 5 chrX 126432855 126433607 -40216689 - Lx2 LINE L1 0 6997 6245 7 1549 4000 183 26 50 chrX 126433607 126433823 -40216473 - L1_Mur1 LINE L1 -734 5152 4946 7 1549 1561 52 28 5 chrX 126433823 126434034 -40216262 + L1_Mus1 LINE L1 6352 6567 0 7 1549 4000 183 26 50 chrX 126434034 126434714 -40215582 - L1_Mur1 LINE L1 -941 4945 4278 7 1549 1147 247 124 21 chrX 126434750 126435122 -40215174 - MTD LTR MaLR -2 417 8 7 1549 528 239 26 0 chrX 126436047 126436164 -40214132 - B1_Mus2 SINE Alu -27 120 1 7 1549 516 273 7 21 chrX 126436382 126436524 -40213772 + B1F SINE Alu 8 147 -2 7 1549 3173 90 2 5 chrX 126436857 126437293 -40213003 - L1_Mur1 LINE L1 -68 5818 5384 7 1549 37840 29 0 0 chrX 126438482 126444979 -40205317 - L1Md_T LINE L1 0 6585 43 7 1549 369 284 165 0 chrX 126445082 126445209 -40205087 - B1F1 SINE Alu 0 149 2 7 1549 503 301 0 68 chrX 126445507 126445714 -40204582 + B3A SINE B2 13 209 -7 7 1549 398 245 34 51 chrX 126445880 126446003 -40204293 - B1_Mm SINE Alu -13 134 15 7 1549 791 271 14 19 chrX 126450693 126450904 -40199392 + B3 SINE B2 1 210 -6 7 1549 318 35 16 65 chrX 126451284 126451346 -40198950 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 7 1549 3235 144 27 13 chrX 126451360 126451908 -40198388 - Lx4A LINE L1 0 7058 6503 7 1549 276 344 77 31 chrX 126452960 126453155 -40197141 - MLT1C LTR MaLR -202 265 62 7 1549 677 271 31 26 chrX 126453708 126453901 -40196395 - B3 SINE B2 -22 194 1 7 1549 344 190 55 47 chrX 126453930 126454037 -40196259 - B1_Mur1 SINE Alu 0 150 43 7 1549 396 0 0 0 chrX 126454230 126454274 -40196022 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1549 24 32 0 0 chrX 126454289 126454320 -40195976 + AT_rich Low_complexity Low_complexity 1 31 0 7 1549 753 12 0 0 chrX 126454866 126454952 -40195344 + (TG)n Simple_repeat Simple_repeat 1 86 0 7 1549 667 201 22 7 chrX 126454956 126455091 -40195205 - B1_Mus2 SINE Alu -6 141 5 7 1549 1387 287 67 7 chrX 126455476 126455922 -40194374 + Lx8 LINE L1 6998 7470 -3 7 1549 440 298 111 25 chrX 126457421 126457665 -40192631 - L4 LINE RTE -509 1520 1256 7 1549 602 285 0 10 chrX 126458577 126458772 -40191524 - L1MA5 LINE L1 0 6300 6108 7 1549 21 0 0 0 chrX 126458786 126458807 -40191489 + AT_rich Low_complexity Low_complexity 1 21 0 7 1549 180 0 0 0 chrX 126458820 126458840 -40191456 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 7 1549 5611 89 3 1 chrX 126458843 126459621 -40190675 - L1_Mus1 LINE L1 -6 6561 5783 7 1549 1490 54 0 10 chrX 126459651 126459855 -40190441 - L1Md_F2 LINE L1 -7 6575 6374 7 1549 3998 60 2 0 chrX 126459856 126460356 -40189940 - L1_Mm LINE L1 -87 5796 5296 7 1549 1497 82 14 0 chrX 126460346 126460566 -40189730 - L1VL1 LINE L1 -5777 645 423 7 1549 776 109 0 59 chrX 126460562 126460698 -40189598 - L1VL1 LINE L1 -6131 291 164 7 1549 448 216 9 0 chrX 126461239 126461355 -40188941 - Lx2B LINE L1 -1 6999 6883 7 1549 24 0 0 0 chrX 126461739 126461763 -40188533 + AT_rich Low_complexity Low_complexity 1 24 0 7 1549 247 326 28 69 chrX 126462171 126462316 -40187980 - ID_B1 SINE B4 -8 216 78 7 1549 23 0 0 0 chrX 126463174 126463197 -40187099 + AT_rich Low_complexity Low_complexity 1 23 0 7 1549 180 103 0 0 chrX 126464316 126464328 -40185968 + (T)n Simple_repeat Simple_repeat 1 12 0 7 1549 1002 95 0 20 chrX 126464328 126464478 -40185818 - B1_Mm SINE Alu 0 147 1 7 1549 180 103 0 0 chrX 126464478 126464494 -40185802 + (T)n Simple_repeat Simple_repeat 1 16 0 7 1549 303 271 0 145 chrX 126465044 126465096 -40185200 - L1MEg LINE L1 -4141 1943 1896 7 1549 1144 68 0 0 chrX 126465096 126465244 -40185052 - B1_Mus1 SINE Alu 0 148 1 7 1549 303 271 0 145 chrX 126465244 126465329 -40184967 - L1MEg LINE L1 -4189 1895 1826 7 1549 21 0 0 0 chrX 126465414 126465435 -40184861 + AT_rich Low_complexity Low_complexity 1 21 0 7 1549 1430 321 82 50 chrX 126465435 126466429 -40183867 - Lx8 LINE L1 -3 7470 6400 7 1549 4646 163 42 5 chrX 126466423 126467343 -40182953 - L1_Mur2 LINE L1 -1827 4050 3097 7 1549 22 35 0 0 chrX 126467388 126467417 -40182879 + AT_rich Low_complexity Low_complexity 1 29 0 7 1549 426 69 0 0 chrX 126467622 126467680 -40182616 + (CA)n Simple_repeat Simple_repeat 2 59 0 7 1549 367 341 32 21 chrX 126468649 126468835 -40181461 - MER5A DNA MER1_type 0 189 2 7 1549 351 0 0 0 chrX 126469280 126469319 -40180977 + (TATG)n Simple_repeat Simple_repeat 2 40 0 7 1549 7911 105 14 31 chrX 126469322 126470569 -40179727 - Lx3A LINE L1 -14 6967 5742 7 1549 1262 245 73 12 chrX 126471321 126471664 -40178632 - ORR1D1 LTR MaLR -8 366 3 7 1549 1637 137 3 11 chrX 126472097 126472384 -40177912 + Lx3A LINE L1 6686 6970 -11 7 1549 235 316 10 31 chrX 126474314 126474412 -40175884 + Lx6 LINE L1 5915 6010 -1450 7 1549 455 304 67 10 chrX 126474762 126474955 -40175341 - B3 SINE B2 -11 205 2 7 1549 683 297 0 19 chrX 126475538 126475696 -40174600 - RSINE1 SINE B4 -8 157 3 7 1549 204 356 98 40 chrX 126475866 126476005 -40174291 + MIRc SINE MIR 4 151 -125 7 1549 26 0 0 0 chrX 126477699 126477725 -40172571 + AT_rich Low_complexity Low_complexity 1 26 0 7 1549 1127 68 0 0 chrX 126479043 126479190 -40171106 + B1_Mm SINE Alu 1 147 0 7 1549 276 152 0 0 chrX 126479236 126479302 -40170994 + GA-rich Low_complexity Low_complexity 2 67 0 7 1549 243 286 28 14 chrX 126481216 126481287 -40169009 - MIR SINE MIR -31 231 160 7 1549 1841 136 66 0 chrX 126481811 126482128 -40168168 + Lx3A LINE L1 6636 6973 -8 7 1549 36 23 0 0 chrX 126482128 126482171 -40168125 + AT_rich Low_complexity Low_complexity 1 43 0 7 1549 231 91 35 35 chrX 126482760 126482817 -40167479 + T-rich Low_complexity Low_complexity 2 58 0 7 1549 23 0 0 0 chrX 126483601 126483624 -40166672 + AT_rich Low_complexity Low_complexity 1 23 0 7 193 1839 215 42 37 chrX 126484380 126485003 -40165293 - RLTR31_Mm LTR ERVK 0 584 1 7 1550 194 0 39 0 chrX 126485101 126485127 -40165169 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1550 4625 2 0 0 chrX 126485211 126485726 -40164570 + L1Md_A LINE L1 6068 6582 0 7 1550 187 402 21 0 chrX 126486232 126486329 -40163967 + MIR SINE MIR 88 186 -76 7 1550 23 92 0 0 chrX 126486634 126486699 -40163597 + AT_rich Low_complexity Low_complexity 1 65 0 7 1550 23 78 0 0 chrX 126487605 126487656 -40162640 + AT_rich Low_complexity Low_complexity 1 51 0 7 1550 307 304 33 0 chrX 126488115 126488207 -40162089 - Lx7 LINE L1 -440 7256 7162 7 1550 21 89 0 0 chrX 126488669 126488725 -40161571 + AT_rich Low_complexity Low_complexity 1 56 0 7 1550 657 119 0 0 chrX 126489704 126489805 -40160491 + (TTTTC)n Simple_repeat Simple_repeat 4 104 0 7 1550 530 203 0 21 chrX 126489796 126489842 -40160454 + polypyrimidine Low_complexity Low_complexity 95 140 0 7 1550 1147 102 14 6 chrX 126489842 126490021 -40160275 + (TTTC)n Simple_repeat Simple_repeat 1 183 -183 7 1550 1147 102 14 6 chrX 126490028 126490205 -40160091 + (TTTC)n Simple_repeat Simple_repeat 184 366 0 7 1550 530 203 0 21 chrX 126490205 126490291 -40160005 + polypyrimidine Low_complexity Low_complexity 4 87 0 7 1550 23 68 0 0 chrX 126492307 126492351 -40157945 + AT_rich Low_complexity Low_complexity 1 44 0 7 1550 989 136 0 0 chrX 126492858 126493005 -40157291 + B1_Mus1 SINE Alu 1 147 -1 7 1550 312 133 0 0 chrX 126493005 126493065 -40157231 + (TAAA)n Simple_repeat Simple_repeat 1 60 0 7 1550 221 291 83 69 chrX 126493289 126493433 -40156863 - ID_B1 SINE B4 -77 147 2 7 1550 314 292 88 17 chrX 126496123 126496304 -40153992 - L1ME1 LINE L1 -283 5896 5703 7 1550 4211 87 3 23 chrX 126496340 126496949 -40153347 - L1_Mus3 LINE L1 -3 6635 6039 7 1550 197 340 48 39 chrX 126498636 126498740 -40151556 + MIRm SINE MIR 61 165 -111 7 1550 469 304 0 26 chrX 126498996 126499148 -40151148 - B1F1 SINE Alu -1 148 1 7 1550 468 77 0 0 chrX 126499807 126499872 -40150424 + (TATG)n Simple_repeat Simple_repeat 4 68 0 7 1550 3142 50 5 0 chrX 126500059 126500455 -40149841 - MTB LTR MaLR -2 398 1 1 1550 22 0 0 0 chrX 126500872 126500894 -40149402 + AT_rich Low_complexity Low_complexity 1 22 0 2 1550 21 0 0 0 chrX 126502696 126502717 -40147579 + AT_rich Low_complexity Low_complexity 1 21 0 3 1550 616 257 0 0 chrX 126502878 126503018 -40147278 - B1_Mur1 SINE Alu -9 140 1 4 1550 243 204 0 0 chrX 126503123 126503177 -40147119 + CT-rich Low_complexity Low_complexity 1 54 0 5 1550 271 250 0 14 chrX 126503181 126503254 -40147042 - B1_Mur1 SINE Alu 0 149 78 6 1550 250 266 0 0 chrX 126503818 126503882 -40146414 + (TA)n Simple_repeat Simple_repeat 1 64 0 7 1550 27 81 0 0 chrX 126503961 126504023 -40146273 + AT_rich Low_complexity Low_complexity 1 62 0 8 1550 234 136 0 0 chrX 126504460 126504504 -40145792 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 9 1550 449 231 8 8 chrX 126504699 126504830 -40145466 - Lx2B LINE L1 0 7000 6870 1 1550 751 184 11 77 chrX 126504831 126505013 -40145283 + Lx2 LINE L1 6621 6790 -207 1 1550 203 250 12 0 chrX 126505045 126505129 -40145167 + (TCTG)n Simple_repeat Simple_repeat 4 88 0 1 1550 241 219 95 14 chrX 126505136 126505210 -40145086 - ID2 SINE ID -1 82 3 1 1550 185 389 8 58 chrX 126505211 126505331 -40144965 + MIRc SINE MIR 104 217 -51 1 1550 210 306 79 53 chrX 126505431 126505507 -40144789 - MamSINE1 SINE tRNA -201 89 12 1 1550 285 297 6 39 chrX 126505838 126506020 -40144276 + (CCA)n Simple_repeat Simple_repeat 2 177 0 1 1550 462 188 0 0 chrX 126506667 126506768 -40143528 + (TA)n Simple_repeat Simple_repeat 1 101 0 1 1550 259 300 88 44 chrX 126508827 126508963 -40141333 + MIR SINE MIR 116 257 -5 1 1550 1456 37 5 21 chrX 126509935 126509966 -40140330 - B2_Mm1a SINE B2 -4 189 161 1 1550 531 0 0 0 chrX 126509966 126510025 -40140271 + (TTTA)n Simple_repeat Simple_repeat 3 61 0 2 1550 1456 37 5 21 chrX 126510025 126510184 -40140112 - B2_Mm1a SINE B2 -33 160 2 1 1550 340 284 138 20 chrX 126510652 126510822 -40139474 - MER57D LTR ERV1 -117 294 94 2 1550 21 36 0 0 chrX 126511703 126511731 -40138565 + AT_rich Low_complexity Low_complexity 1 28 0 2 1550 360 0 0 0 chrX 126513821 126513861 -40136435 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 1550 573 15 0 0 chrX 126514275 126514341 -40135955 + (TTA)n Simple_repeat Simple_repeat 3 68 0 2 1550 249 57 0 0 chrX 126514478 126514513 -40135783 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1550 201 178 0 0 chrX 126514517 126514562 -40135734 + (CACG)n Simple_repeat Simple_repeat 4 48 0 2 1550 27 29 0 0 chrX 126515372 126515406 -40134890 + AT_rich Low_complexity Low_complexity 1 34 0 2 1550 22 56 0 0 chrX 126515428 126515464 -40134832 + AT_rich Low_complexity Low_complexity 1 36 0 2 1550 568 260 105 15 chrX 126515483 126515680 -40134616 - B3 SINE B2 -3 213 1 2 1550 382 278 21 22 chrX 126516017 126516136 -40134160 + B1_Mur4 SINE Alu 5 115 -5 3 1550 237 346 126 15 chrX 126516136 126516152 -40134144 + B4 SINE B4 90 239 -53 3 1550 935 230 82 0 chrX 126516670 126516789 -40133507 - Lx9 LINE L1 -7 7637 7512 3 1550 315 0 0 0 chrX 126516789 126516824 -40133472 + (TC)n Simple_repeat Simple_repeat 2 36 0 3 1550 935 230 82 0 chrX 126516824 126517008 -40133288 - Lx9 LINE L1 -133 7511 7310 3 1550 1453 118 0 9 chrX 126517434 126517665 -40132631 - L1Md_F2 LINE L1 0 6582 6354 3 1550 712 149 9 0 chrX 126517665 126517779 -40132517 - Lx4A LINE L1 -640 6418 6304 3 1550 225 349 28 28 chrX 126518614 126518723 -40131573 - MamSINE1 SINE tRNA -178 112 4 3 1550 191 301 66 28 chrX 126520005 126520111 -40130185 - MIR SINE MIR -13 249 140 3 1550 630 137 15 30 chrX 126521301 126521436 -40128860 - Lx4B LINE L1 -5 7053 6921 3 1550 32 57 0 0 chrX 126521910 126521963 -40128333 + AT_rich Low_complexity Low_complexity 1 53 0 3 1550 555 78 0 4 chrX 126521995 126522085 -40128211 - L1_Mus4 LINE L1 -1083 5914 5827 4 1550 2997 62 0 0 chrX 126522091 126522480 -40127816 - L1Md_F2 LINE L1 0 6582 6194 4 1550 20304 84 18 9 chrX 126522486 126525435 -40124861 - L1_Mm LINE L1 -1501 4382 1410 4 1550 664 103 0 17 chrX 126525439 126525557 -40124739 + (TTTA)n Simple_repeat Simple_repeat 1 116 0 4 1550 2490 101 7 3 chrX 126525557 126525963 -40124333 - L1Md_A LINE L1 -1020 4866 4452 4 1550 1469 76 114 4 chrX 126525964 126526201 -40124095 - L1Md_A LINE L1 -5380 1344 1082 4 1550 241 317 115 16 chrX 126527725 126527847 -40122449 + B1F SINE Alu 1 134 -15 4 1550 7052 76 14 10 chrX 126527867 126528827 -40121469 - L1_Mus1 LINE L1 0 6567 5605 4 1550 1689 97 7 1 chrX 126528812 126529066 -40121230 + L1_Mus1 LINE L1 5386 5665 -679 4 1550 215 194 0 69 chrX 126529112 126529184 -40121112 + A-rich Low_complexity Low_complexity 3 69 0 4 1550 3908 133 31 21 chrX 126529885 126530553 -40119743 - Lx LINE L1 -18 6636 5962 4 1550 221 146 0 20 chrX 126531249 126531298 -40118998 + GA-rich Low_complexity Low_complexity 1 48 0 4 1550 23 0 0 0 chrX 126531740 126531763 -40118533 + AT_rich Low_complexity Low_complexity 1 23 0 5 1550 193 314 67 44 chrX 126532130 126532220 -40118076 + MIR SINE MIR 111 202 -60 5 1550 1221 89 0 0 chrX 126533503 126533671 -40116625 - B2_Mm2 SINE B2 -27 168 1 5 1550 4300 60 21 17 chrX 126533751 126533931 -40116365 - L1Md_F2 LINE L1 -13 6569 6394 5 1550 2389 76 72 50 chrX 126533931 126534333 -40115963 - IAPLTR2a LTR ERVK 0 411 1 5 1550 4300 60 21 17 chrX 126534333 126534729 -40115567 - L1Md_F2 LINE L1 -189 6393 5991 5 1550 737 275 14 10 chrX 126534745 126534954 -40115342 - B3 SINE B2 -5 211 2 5 1550 396 0 0 0 chrX 126536402 126536446 -40113850 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 5 1550 485 328 6 6 chrX 126538120 126538301 -40111995 + B3A SINE B2 2 182 -16 5 1550 386 219 0 9 chrX 126538302 126538408 -40111888 + (TA)n Simple_repeat Simple_repeat 1 105 0 5 1550 294 216 97 18 chrX 126538859 126538972 -40111324 - Tigger15a DNA TcMar -308 407 286 5 1550 209 326 33 46 chrX 126539950 126540101 -40110195 + MIR SINE MIR 19 167 -95 6 1550 291 54 0 0 chrX 126540814 126540851 -40109445 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1550 180 0 0 0 chrX 126541009 126541029 -40109267 + (TA)n Simple_repeat Simple_repeat 1 20 0 6 1550 200 61 61 0 chrX 126541453 126541486 -40108810 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 6 1550 542 40 13 0 chrX 126541998 126542073 -40108223 - B1_Mus2 SINE Alu 0 147 72 6 1550 305 216 0 102 chrX 126542073 126542105 -40108191 - ID_B1 SINE B4 0 223 128 6 1550 580 308 23 53 chrX 126542274 126542538 -40107758 - Lx7 LINE L1 -395 7301 7046 6 1550 1038 249 14 25 chrX 126543279 126543555 -40106741 - Lx2B LINE L1 -1 6999 6727 6 1550 268 282 51 0 chrX 126544904 126544982 -40105314 - ID4 SINE ID 0 83 2 6 1550 11832 27 0 23 chrX 126546354 126548322 -40101974 + L1Md_A LINE L1 738 2651 -3232 6 1550 9326 22 2 1 chrX 126548317 126549399 -40100897 + L1Md_A LINE L1 4505 5586 -297 6 1550 8195 43 0 0 chrX 126549399 126550395 -40099901 + L1Md_T LINE L1 5587 6582 0 7 1550 9326 22 2 1 chrX 126550395 126550407 -40099889 + L1Md_A LINE L1 5587 5600 -283 6 1550 528 247 0 0 chrX 126550835 126550932 -40099364 - B1_Mur1 SINE Alu -8 141 45 7 1550 21 36 0 0 chrX 126551094 126551122 -40099174 + AT_rich Low_complexity Low_complexity 1 28 0 7 1550 22 0 0 0 chrX 126551498 126551520 -40098776 + AT_rich Low_complexity Low_complexity 1 22 0 7 1550 369 58 0 0 chrX 126551994 126552046 -40098250 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 1550 30 49 0 16 chrX 126552965 126552989 -40097307 + AT_rich Low_complexity Low_complexity 1 24 0 7 1550 4130 114 49 3 chrX 126552989 126553647 -40096649 - Lx3_Mus LINE L1 -7 7002 6315 7 1550 30 49 0 16 chrX 126553647 126553684 -40096612 + AT_rich Low_complexity Low_complexity 1 37 0 7 1550 1733 125 133 13 chrX 126553791 126554099 -40096197 - Lx LINE L1 -6 6648 6304 7 1550 1126 333 43 18 chrX 126554904 126555295 -40095001 - Lx5 LINE L1 -33 7017 6617 7 1550 461 294 35 58 chrX 126556154 126556184 -40094112 + B3A SINE B2 30 56 -142 8 1550 1319 95 16 5 chrX 126556184 126556374 -40093922 + B2_Mm2 SINE B2 1 192 -3 8 1550 461 294 35 58 chrX 126556374 126556516 -40093780 + B3A SINE B2 57 198 0 8 1550 291 28 0 0 chrX 126556852 126556888 -40093408 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 8 1550 23 54 0 0 chrX 126557466 126557503 -40092793 + AT_rich Low_complexity Low_complexity 1 37 0 8 1550 493 323 110 19 chrX 126557503 126557929 -40092367 + L1MA6 LINE L1 5669 6133 -167 8 1550 257 128 21 0 chrX 126558103 126558150 -40092146 + (TC)n Simple_repeat Simple_repeat 1 48 0 8 1550 21 0 0 0 chrX 126558929 126558950 -40091346 + AT_rich Low_complexity Low_complexity 1 21 0 8 1550 304 121 0 0 chrX 126559601 126559659 -40090637 + L1Md_T LINE L1 6522 6579 -3 8 1550 28 0 0 0 chrX 126560640 126560668 -40089628 + AT_rich Low_complexity Low_complexity 1 28 0 8 1550 2565 150 26 17 chrX 126560668 126561135 -40089161 - Lx3A LINE L1 -11 6970 6500 8 1550 444 362 53 33 chrX 126561335 126561729 -40088567 + Lx9 LINE L1 7035 7436 -208 9 1550 396 0 0 0 chrX 126561750 126561794 -40088502 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 1550 537 44 0 0 chrX 126563037 126563105 -40087191 + (CA)n Simple_repeat Simple_repeat 2 69 0 9 1550 1472 107 32 28 chrX 126563389 126563638 -40086658 + L1_Mus3 LINE L1 6384 6633 -5 9 1550 207 0 0 0 chrX 126563754 126563777 -40086519 + (TC)n Simple_repeat Simple_repeat 2 24 0 9 1550 288 0 0 0 chrX 126563777 126563808 -40086488 + (TA)n Simple_repeat Simple_repeat 1 32 0 9 1550 345 346 25 119 chrX 126563989 126564154 -40086142 - B3 SINE B2 -5 193 37 9 1550 1077 78 7 0 chrX 126564154 126564296 -40086000 + B1_Mus2 SINE Alu 2 144 -3 9 1550 180 77 0 0 chrX 126564296 126564322 -40085974 + (CAA)n Simple_repeat Simple_repeat 2 27 0 9 1550 345 343 25 117 chrX 126564322 126564364 -40085932 - B3 SINE B2 -178 38 7 9 1550 21 57 0 0 chrX 126564642 126564677 -40085619 + AT_rich Low_complexity Low_complexity 1 35 0 9 1550 446 61 15 0 chrX 126564767 126564833 -40085463 + (TA)n Simple_repeat Simple_repeat 1 67 0 1 1550 37 23 0 0 chrX 126564853 126564897 -40085399 + AT_rich Low_complexity Low_complexity 1 44 0 1 1550 188 182 0 22 chrX 126567165 126567210 -40083086 + CT-rich Low_complexity Low_complexity 2 45 0 1 1550 386 124 0 101 chrX 126567844 126567943 -40082353 - L1Md_F2 LINE L1 -1 6581 6493 1 1550 423 113 0 0 chrX 126568083 126568154 -40082142 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 1550 750 115 45 15 chrX 126568775 126568907 -40081389 + L1Md_F2 LINE L1 6434 6569 -13 1 1550 21 0 0 0 chrX 126569168 126569189 -40081107 + AT_rich Low_complexity Low_complexity 1 21 0 1 1550 360 0 0 0 chrX 126569730 126569770 -40080526 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 1550 218 390 19 48 chrX 126569898 126570003 -40080293 + B2_Mm2 SINE B2 1 102 -93 1 1550 317 208 39 10 chrX 126570796 126570898 -40079398 + (TA)n Simple_repeat Simple_repeat 2 106 0 1 1550 207 218 0 0 chrX 126574198 126574253 -40076043 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1550 25 0 0 0 chrX 126575186 126575211 -40075085 + AT_rich Low_complexity Low_complexity 1 25 0 1 1550 27 29 0 0 chrX 126576487 126576521 -40073775 + AT_rich Low_complexity Low_complexity 1 34 0 1 1550 355 355 65 12 chrX 126576882 126577050 -40073246 + MER58A DNA MER1_type 6 182 -42 1 1550 807 169 96 0 chrX 126577706 126577883 -40072413 - Lx3C LINE L1 -130 6846 6653 1 1550 444 19 0 0 chrX 126579012 126579065 -40071231 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1550 1149 61 0 0 chrX 126582937 126583084 -40067212 + B1_Mus2 SINE Alu 1 147 0 1 1550 401 281 45 195 chrX 126583363 126583717 -40066579 - Tigger7 DNA MER2_type -5 2486 2186 1 1550 307 356 14 14 chrX 126583715 126583863 -40066433 - Tigger7 DNA MER2_type -2112 379 232 1 1550 293 361 81 37 chrX 126584263 126584424 -40065872 - Tigger7 DNA MER2_type -2258 233 66 1 1550 213 132 0 0 chrX 126584807 126584845 -40065451 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 1550 2604 144 5 14 chrX 126585311 126585753 -40064543 + L1_Mm LINE L1 4439 4876 -1007 1 1550 1012 30 0 0 chrX 126585754 126585886 -40064410 - L1Md_T LINE L1 0 6582 6451 1 1550 252 0 0 0 chrX 126585961 126585989 -40064307 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1550 870 294 96 6 chrX 126587393 126587756 -40062540 + Charlie4a DNA MER1_type 25 420 -88 1 1550 207 0 0 0 chrX 126588118 126588141 -40062155 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 1 1550 1266 58 21 16 chrX 126588180 126588371 -40061925 + L1Md_F2 LINE L1 6379 6570 -12 1 1550 351 397 102 6 chrX 126589576 126589733 -40060563 - L3b LINE CR1 -36 446 275 1 1550 21 36 0 0 chrX 126590788 126590816 -40059480 + AT_rich Low_complexity Low_complexity 1 28 0 1 1550 21 0 0 0 chrX 126591987 126592008 -40058288 + AT_rich Low_complexity Low_complexity 1 21 0 1 1550 290 139 47 0 chrX 126592103 126592189 -40058107 + (TA)n Simple_repeat Simple_repeat 2 91 0 1 1550 5666 156 34 70 chrX 126592282 126594076 -40056220 + L1Md_F LINE L1 280 2078 -3805 1 1550 3250 102 8 2 chrX 126594072 126594543 -40055753 + L1Md_F LINE L1 4054 4527 -1356 1 1550 2136 104 9 3 chrX 126594543 126594861 -40055435 - RLTR22_Mus LTR ERVK -1488 320 1 1 1550 411 143 153 0 chrX 126594888 126594986 -40055310 - Lx9 LINE L1 -147 7497 7385 1 1550 292 254 121 47 chrX 126596369 126596518 -40053778 - RLTR25B LTR ERVK -859 169 10 1 1550 385 87 58 0 chrX 126596697 126596766 -40053530 + B1_Mur3 SINE Alu 76 148 -1 1 1550 241 103 17 33 chrX 126596769 126596829 -40053467 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 1 1550 5148 75 7 7 chrX 126596837 126597673 -40052623 + L1_Mus2 LINE L1 5441 6276 -290 1 1550 884 43 0 0 chrX 126597726 126597843 -40052453 + B1_Mm SINE Alu 31 147 0 1 1550 890 183 6 34 chrX 126597865 126598040 -40052256 - MurERV4_19-int LTR ERVK -5606 174 5 1 1550 5607 2 0 0 chrX 126598110 126598735 -40051561 + L1Md_A LINE L1 5953 6577 -5 1 1550 506 107 12 23 chrX 126598790 126598876 -40051420 - MTC LTR MaLR 0 421 337 1 1550 1059 149 15 5 chrX 126598909 126599097 -40051199 - B2_Mm2 SINE B2 -21 195 1 1 1550 1407 249 48 30 chrX 126599097 126599277 -40051019 - MTC LTR MaLR -87 334 140 1 1550 2969 86 0 7 chrX 126599277 126599723 -40050573 + L1_Mus1 LINE L1 6156 6567 0 1 1550 1407 249 48 30 chrX 126599723 126599867 -40050429 - MTC LTR MaLR -282 139 1 1 1550 585 28 0 0 chrX 126600233 126600304 -40049992 + (GAAA)n Simple_repeat Simple_repeat 3 73 0 1 1550 183 42 0 0 chrX 126601081 126601105 -40049191 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 1550 227 151 0 54 chrX 126602245 126602301 -40047995 + T-rich Low_complexity Low_complexity 1 53 0 1 1550 992 105 28 0 chrX 126602301 126602444 -40047852 - B1_Mm SINE Alu 0 147 1 1 1550 316 360 119 42 chrX 126602525 126602693 -40047603 + B3A SINE B2 2 182 -16 1 1550 23 68 0 0 chrX 126602853 126602897 -40047399 + AT_rich Low_complexity Low_complexity 1 44 0 1 1550 2491 76 0 0 chrX 126602905 126603235 -40047061 - L1_Mus1 LINE L1 -1 6566 6237 1 1550 7153 64 0 10 chrX 126603244 126604165 -40046131 - L1Md_F2 LINE L1 -19 6563 5652 1 1550 242 70 209 0 chrX 126604147 126604190 -40046106 + L1Md_F2 LINE L1 5571 5622 -261 1 1550 3581 88 24 31 chrX 126604170 126604709 -40045587 - L1_Mus1 LINE L1 -302 6265 5731 1 1550 3127 148 23 2 chrX 126604704 126605235 -40045061 + Lx8 LINE L1 5232 5770 -1703 1 1550 220 342 41 73 chrX 126605407 126605530 -40044766 - PB1D7 SINE Alu 0 120 2 1 1550 475 274 204 22 chrX 126605541 126606021 -40044275 - L1MB4 LINE L1 0 6183 5636 1 1550 722 247 30 122 chrX 126606202 126606465 -40043831 - RLTR28B LTR ERVL -3 478 240 1 1550 1224 191 73 4 chrX 126606462 126606709 -40043587 + MTC LTR MaLR 158 421 0 1 1550 180 77 0 0 chrX 126606849 126606875 -40043421 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 1550 244 312 88 53 chrX 126607078 126607305 -40042991 - L1M4c LINE L1 -4877 1507 1273 1 1550 371 284 79 16 chrX 126607931 126608185 -40042111 - L1MB4 LINE L1 -2515 3631 3362 1 1550 3250 40 0 15 chrX 126608557 126608965 -40041331 + L1Md_F2 LINE L1 6177 6578 -4 1 1550 1436 72 0 35 chrX 126608966 126609166 -40041130 + B2_Mm1t SINE B2 1 193 0 1 1550 1674 144 4 8 chrX 126609189 126609454 -40040842 + MTC LTR MaLR 104 367 -54 1 1550 432 178 19 9 chrX 126609465 126609573 -40040723 + A-rich Low_complexity Low_complexity 2 110 0 1 1550 26 0 0 0 chrX 126610060 126610086 -40040210 + AT_rich Low_complexity Low_complexity 1 26 0 1 1550 335 279 0 0 chrX 126610534 126610613 -40039683 - BC1_Mm scRNA scRNA -70 82 4 1 1550 333 369 53 8 chrX 126612436 126612567 -40037729 - B4A SINE B4 -153 139 3 1 1550 2160 121 55 13 chrX 126612803 126613187 -40037109 + Lx LINE L1 6247 6646 -8 1 1551 3679 60 13 0 chrX 126617004 126617473 -40032823 - MT2C_Mm LTR ERVL 0 475 1 1 1551 1086 44 15 0 chrX 126617544 126617680 -40032616 + B1_Mm SINE Alu 1 138 -9 1 1551 667 72 52 97 chrX 126617964 126618118 -40032178 + L1_Mus3 LINE L1 6484 6630 -8 1 1551 440 287 68 30 chrX 126618128 126618261 -40032035 - ID_B1 SINE B4 -9 215 78 1 1551 291 71 0 0 chrX 126619008 126619050 -40031246 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 1551 1039 83 21 0 chrX 126619109 126619253 -40031043 + B1_Mm SINE Alu 1 147 0 1 1551 822 288 58 0 chrX 126619840 126620066 -40030230 - ORR1D2 LTR MaLR -131 239 1 1 1551 897 300 62 47 chrX 126620467 126620743 -40029553 + MTEa LTR MaLR 87 366 -13 1 1551 436 276 100 57 chrX 126621650 126621967 -40028329 - ORR1D2 LTR MaLR -9 370 26 1 1551 182 200 73 91 chrX 126622875 126622930 -40027366 - L3 LINE CR1 -2084 2405 2352 1 1551 25 0 0 0 chrX 126623444 126623469 -40026827 + AT_rich Low_complexity Low_complexity 1 25 0 1 1551 507 173 0 21 chrX 126624213 126624355 -40025941 + (TA)n Simple_repeat Simple_repeat 1 139 0 1 1551 680 248 7 7 chrX 126625939 126626085 -40024211 + URR1B DNA MER1_type 2 147 -78 1 1551 7824 55 0 5 chrX 126626248 126627237 -40023059 + L1Md_F2 LINE L1 5587 6570 -12 1 1551 421 57 0 0 chrX 126627240 126627293 -40023003 + ORR1A4 LTR MaLR 274 326 -3 1 1551 450 227 20 30 chrX 126627403 126627503 -40022793 + B3 SINE B2 3 101 -115 1 1551 2203 106 29 3 chrX 126629321 126629662 -40020634 + Lx LINE L1 6300 6649 -5 1 1551 294 232 87 39 chrX 126630219 126630322 -40019974 + B1F1 SINE Alu 42 149 0 1 1551 591 120 0 0 chrX 126630385 126630493 -40019803 + (GA)n Simple_repeat Simple_repeat 1 108 0 1 1551 725 293 43 10 chrX 126632562 126632769 -40017527 - B3 SINE B2 -2 214 1 1 1551 8856 11 0 0 chrX 126632776 126634523 -40015773 - L1Md_T LINE L1 0 6582 4881 1 1551 8719 28 0 0 chrX 126634521 126635564 -40014732 + L1Md_T LINE L1 3834 4876 -1007 1 1551 31 0 0 0 chrX 126635753 126635784 -40014512 + AT_rich Low_complexity Low_complexity 1 31 0 1 1551 495 235 37 61 chrX 126635829 126635992 -40014304 + Lx5 LINE L1 6851 7009 -41 1 1551 341 357 52 88 chrX 126636277 126636661 -40013635 - ORR1D2 LTR MaLR 0 370 1 1 1551 275 257 17 52 chrX 126636785 126636900 -40013396 + L1MB3 LINE L1 6044 6154 -29 1 1551 22 0 0 0 chrX 126638304 126638326 -40011970 + AT_rich Low_complexity Low_complexity 1 22 0 1 1551 236 347 147 20 chrX 126639790 126639940 -40010356 - MER5A DNA MER1_type -2 187 19 1 1551 225 234 219 0 chrX 126639987 126640051 -40010245 - ID2 SINE ID -2 81 4 1 1551 201 279 42 42 chrX 126640425 126640496 -40009800 - L2c LINE L2 -67 3320 3250 1 1551 1738 158 3 58 chrX 126640775 126641118 -40009178 - ORR1A3 LTR MaLR 0 326 3 1 1551 22 35 0 0 chrX 126641500 126641529 -40008767 + AT_rich Low_complexity Low_complexity 1 29 0 1 1551 22 35 0 0 chrX 126642171 126642200 -40008096 + AT_rich Low_complexity Low_complexity 1 29 0 1 1551 23 0 0 0 chrX 126642275 126642298 -40007998 + AT_rich Low_complexity Low_complexity 1 23 0 1 1551 190 328 0 62 chrX 126644798 126644863 -40005433 + MIR SINE MIR 180 240 -22 1 1551 920 215 154 4 chrX 126646227 126646461 -40003835 + Charlie16a DNA MER1_type 74 342 0 2 1551 759 245 235 3 chrX 126646863 126647203 -40003093 + MTD LTR MaLR 1 419 0 2 1551 633 90 0 0 chrX 126647215 126647304 -40002992 + (TG)n Simple_repeat Simple_repeat 2 90 0 2 1551 24 0 0 0 chrX 126647631 126647655 -40002641 + AT_rich Low_complexity Low_complexity 1 24 0 2 1551 221 316 40 10 chrX 126648081 126648180 -40002116 - MIR3 SINE MIR -26 182 81 2 1551 261 297 70 8 chrX 126648868 126648997 -40001299 + L1ME3A LINE L1 6022 6158 -15 2 1551 21 36 0 0 chrX 126650726 126650754 -39999542 + AT_rich Low_complexity Low_complexity 1 28 0 2 1551 499 265 84 104 chrX 126650903 126650919 -39999377 - B3A SINE B2 0 198 186 2 1551 309 118 0 0 chrX 126650919 126650970 -39999326 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1551 499 265 84 104 chrX 126650970 126651155 -39999141 - B3A SINE B2 -13 185 1 2 1551 36 77 0 0 chrX 126651355 126651433 -39998863 + AT_rich Low_complexity Low_complexity 1 78 0 2 1551 33 0 0 0 chrX 126651719 126651752 -39998544 + AT_rich Low_complexity Low_complexity 1 33 0 2 1551 209 179 0 0 chrX 126651832 126651871 -39998425 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1551 589 303 90 21 chrX 126651912 126652101 -39998195 + B3 SINE B2 15 216 0 2 1551 331 241 23 0 chrX 126652473 126652560 -39997736 + MTE2b LTR MaLR 4 92 -287 2 1551 3498 69 0 38 chrX 126652571 126653070 -39997226 - L1Md_F2 LINE L1 -2 6580 6101 2 1551 1722 308 53 18 chrX 126653090 126653803 -39996493 - Lx5 LINE L1 -2 7048 6455 2 1551 783 301 35 56 chrX 126653803 126653839 -39996457 + MTE2b LTR MaLR 96 124 -255 2 1551 973 181 116 0 chrX 126653839 126654038 -39996258 - URR1A DNA MER1_type -4 222 1 2 1551 783 301 35 56 chrX 126654038 126654286 -39996010 + MTE2b LTR MaLR 125 374 -5 2 1551 874 67 0 135 chrX 126655195 126655351 -39994945 + B1_Mus1 SINE Alu 1 135 -13 2 1551 1070 50 18 12 chrX 126655364 126655527 -39994769 + (GGA)n Simple_repeat Simple_repeat 3 166 0 2 1551 21 0 0 0 chrX 126655689 126655710 -39994586 + AT_rich Low_complexity Low_complexity 1 21 0 2 1551 234 200 13 39 chrX 126656749 126656827 -39993469 + (TTG)n Simple_repeat Simple_repeat 1 76 0 2 1551 464 322 20 14 chrX 126656829 126656977 -39993319 - B1F1 SINE Alu 0 149 1 2 1551 205 186 0 0 chrX 126657898 126657941 -39992355 + T-rich Low_complexity Low_complexity 1 43 0 2 1551 184 393 104 6 chrX 126659152 126659316 -39990980 - MIRc SINE MIR -16 252 73 2 1551 825 269 49 8 chrX 126661732 126661979 -39988317 + Lx4B LINE L1 6764 7020 -38 2 1551 24 0 0 0 chrX 126661992 126662016 -39988280 + AT_rich Low_complexity Low_complexity 1 24 0 2 1551 202 205 0 43 chrX 126662085 126662131 -39988165 + T-rich Low_complexity Low_complexity 5 48 0 2 1551 22 56 0 0 chrX 126662534 126662570 -39987726 + AT_rich Low_complexity Low_complexity 1 36 0 2 1551 429 333 142 35 chrX 126662627 126662849 -39987447 + MLT1A1 LTR MaLR 26 275 -133 2 1551 420 20 0 0 chrX 126662849 126662898 -39987398 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1551 429 333 142 35 chrX 126662898 126662964 -39987332 + MLT1A1 LTR MaLR 276 344 -64 2 1551 303 28 0 0 chrX 126663248 126663284 -39987012 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1551 183 217 0 0 chrX 126664425 126664485 -39985811 + T-rich Low_complexity Low_complexity 1 60 0 2 1551 383 106 0 15 chrX 126664610 126664677 -39985619 + (TA)n Simple_repeat Simple_repeat 2 67 0 2 1551 328 134 14 82 chrX 126666298 126666371 -39983925 + HAL1-3A_ME LINE L1 1977 2044 -814 2 1551 316 304 19 47 chrX 126667944 126668051 -39982245 - U6 snRNA snRNA -3 104 1 2 1551 600 14 0 0 chrX 126668826 126668895 -39981401 + (GA)n Simple_repeat Simple_repeat 2 70 0 2 1551 458 285 0 53 chrX 126671973 126672125 -39978171 - B1_Mur2 SINE Alu -5 144 1 2 1551 601 333 113 89 chrX 126672992 126673657 -39976639 + MER44D DNA MER2_type 13 693 -12 2 1551 277 306 0 0 chrX 126674909 126674994 -39975302 + (TA)n Simple_repeat Simple_repeat 1 85 0 2 1551 2141 117 3 50 chrX 126675090 126675431 -39974865 - ORR1A2 LTR MaLR -2 325 1 2 1551 351 0 0 0 chrX 126677041 126677080 -39973216 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1551 3321 54 5 2 chrX 126677162 126677592 -39972704 + L1_Mus1 LINE L1 6136 6566 -1 2 1551 31 26 0 0 chrX 126679805 126679843 -39970453 + AT_rich Low_complexity Low_complexity 1 38 0 2 1551 534 328 14 71 chrX 126679967 126680177 -39970119 + ID_B1 SINE B4 3 200 -24 2 1551 306 276 58 86 chrX 126680056 126680195 -39970101 + B1F SINE Alu 7 141 -8 2 1551 25 31 0 0 chrX 126680841 126680873 -39969423 + AT_rich Low_complexity Low_complexity 1 32 0 2 1551 402 387 28 0 chrX 126681044 126681186 -39969110 + Tigger5 DNA MER2_type 53 198 -2208 2 1551 2774 110 2 0 chrX 126681190 126681589 -39968707 + MTA_Mm LTR MaLR 1 400 0 2 1551 6682 103 25 77 chrX 126681589 126682747 -39967549 + MTA_Mm-int LTR MaLR 1 1098 0 2 1551 2845 104 5 2 chrX 126682747 126683142 -39967154 + MTA_Mm LTR MaLR 1 396 0 2 1551 347 106 15 0 chrX 126683332 126683398 -39966898 + (TA)n Simple_repeat Simple_repeat 2 68 0 2 1551 403 137 40 0 chrX 126684098 126684222 -39966074 + (TA)n Simple_repeat Simple_repeat 2 130 0 2 1551 206 156 0 22 chrX 126684693 126684739 -39965557 + A-rich Low_complexity Low_complexity 2 46 0 2 1551 227 167 22 22 chrX 126685469 126685561 -39964735 + (TA)n Simple_repeat Simple_repeat 2 93 0 2 1551 21209 130 11 10 chrX 126688695 126692637 -39957659 + L1VL4 LINE L1 204 4427 -1456 2 1551 1896 111 39 19 chrX 126692637 126692949 -39957347 + L1_Mus2 LINE L1 6249 6566 0 2 1551 25 0 0 0 chrX 126695328 126695353 -39954943 + AT_rich Low_complexity Low_complexity 1 25 0 2 1551 277 286 18 0 chrX 126695441 126695497 -39954799 + B1_Mus1 SINE Alu 6 62 -86 2 1551 441 131 0 0 chrX 126695501 126695585 -39954711 + (GA)n Simple_repeat Simple_repeat 1 84 0 2 1551 292 176 23 23 chrX 126695977 126696064 -39954232 + (TATG)n Simple_repeat Simple_repeat 4 90 0 2 1551 279 243 33 26 chrX 126696073 126696225 -39954071 + (TA)n Simple_repeat Simple_repeat 2 154 0 2 1551 342 372 69 7 chrX 126696793 126696955 -39953341 + B3 SINE B2 33 203 -13 2 1551 474 18 0 0 chrX 126696982 126697037 -39953259 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 2 1551 873 26 0 0 chrX 126697790 126697905 -39952391 - L1Md_A LINE L1 -1 6581 6467 2 1551 414 0 0 0 chrX 126698552 126698598 -39951698 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1551 21 57 0 0 chrX 126699330 126699365 -39950931 + AT_rich Low_complexity Low_complexity 1 35 0 2 1551 1418 292 119 33 chrX 126699467 126700229 -39950067 - Lx9 LINE L1 -176 7468 6641 2 1551 360 64 0 0 chrX 126700438 126700485 -39949811 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1551 253 380 10 0 chrX 126700503 126700603 -39949693 - MIRc SINE MIR -94 174 74 2 1551 1544 37 11 0 chrX 126701817 126702006 -39948290 - B2_Mm1t SINE B2 -1 192 2 2 1551 237 333 107 0 chrX 126702572 126702656 -39947640 + MIR SINE MIR 3 95 -167 2 1551 662 286 0 12 chrX 126703475 126703645 -39946651 - MER58A DNA MER1_type 0 224 57 2 1551 213 261 44 33 chrX 126704710 126704801 -39945495 + L2 LINE L2 2525 2616 -803 2 1551 209 57 29 0 chrX 126706532 126706567 -39943729 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 2 1551 232 257 176 0 chrX 126706590 126706664 -39943632 - PB1D10 SINE Alu 0 117 31 2 1551 210 357 100 20 chrX 126707409 126707509 -39942787 + PB1D10 SINE Alu 10 117 0 2 1551 351 0 0 0 chrX 126708914 126708953 -39941343 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1551 235 273 197 0 chrX 126709167 126709233 -39941063 - RSINE1 SINE B4 -85 80 2 2 1551 23 33 0 0 chrX 126709533 126709563 -39940733 + AT_rich Low_complexity Low_complexity 1 30 0 2 1551 320 327 93 74 chrX 126710174 126710336 -39939960 - MER45A DNA Tip100 -6 172 8 2 1551 306 160 184 13 chrX 126711447 126711523 -39938773 - LTR48 LTR ERV1 -697 90 2 2 1551 408 171 0 0 chrX 126714166 126714248 -39936048 + (TA)n Simple_repeat Simple_repeat 2 83 0 2 1551 27 0 0 0 chrX 126715286 126715313 -39934983 + AT_rich Low_complexity Low_complexity 1 27 0 2 1551 6272 110 36 17 chrX 126715403 126717494 -39932802 + L1VL1 LINE L1 217 2292 -3591 2 1551 4063 106 16 0 chrX 126717464 126718080 -39932216 + MusHAL1 LINE L1 1340 1965 -747 2 1551 2744 98 0 27 chrX 126718080 126718488 -39931808 + L1_Mus1 LINE L1 6171 6567 0 2 1551 292 330 24 65 chrX 126718551 126718674 -39931622 - B3A SINE B2 -79 119 2 2 1551 227 333 105 29 chrX 126719491 126719596 -39930700 + PB1 SINE Alu 11 123 -4 2 1551 25 0 0 0 chrX 126719598 126719623 -39930673 + AT_rich Low_complexity Low_complexity 1 25 0 2 1551 435 316 141 48 chrX 126720213 126720359 -39929937 + MLT1A0 LTR MaLR 1 159 -206 2 1551 342 0 0 0 chrX 126720359 126720397 -39929899 + (GA)n Simple_repeat Simple_repeat 1 38 0 2 1551 435 316 141 48 chrX 126720397 126720519 -39929777 + MLT1A0 LTR MaLR 160 294 -71 2 1551 450 248 35 17 chrX 126720676 126720791 -39929505 + PB1D10 SINE Alu 1 117 0 2 1551 21 0 0 0 chrX 126720796 126720817 -39929479 + AT_rich Low_complexity Low_complexity 1 21 0 2 1551 404 161 12 0 chrX 126721085 126721166 -39929130 + CT-rich Low_complexity Low_complexity 1 82 0 2 1551 600 14 0 0 chrX 126721166 126721235 -39929061 + (TTTC)n Simple_repeat Simple_repeat 2 70 0 2 1551 325 248 54 39 chrX 126721285 126721404 -39928892 - Lx7 LINE L1 0 7696 7574 2 1551 336 94 0 0 chrX 126721404 126721457 -39928839 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1551 829 256 24 36 chrX 126721474 126721725 -39928571 - Lx7 LINE L1 -289 7407 7160 2 1551 294 322 36 71 chrX 126722149 126722373 -39927923 + RLTR41 LTR ERV1 186 401 -45 2 1551 241 296 127 41 chrX 126722785 126722982 -39927314 - MER34 LTR ERV1 -71 471 258 2 1551 310 196 194 10 chrX 126723360 126723458 -39926838 - B1_Mur2 SINE Alu 0 149 34 2 1551 279 0 0 0 chrX 126723460 126723491 -39926805 + (TAG)n Simple_repeat Simple_repeat 1 31 0 2 1551 822 122 88 0 chrX 126723498 126723646 -39926650 - L1_Mus3 LINE L1 -20 6618 6458 2 1551 236 158 0 17 chrX 126724996 126725054 -39925242 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 1551 270 0 0 0 chrX 126725093 126725123 -39925173 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1551 261 0 0 0 chrX 126725123 126725151 -39925145 + (GA)n Simple_repeat Simple_repeat 1 29 0 3 1551 363 286 216 6 chrX 126725182 126725358 -39924938 + ID_B1 SINE B4 2 214 -10 3 1551 361 289 112 52 chrX 126725366 126725698 -39924598 - RMER10A LTR ERVL -25 417 12 3 1551 226 397 87 32 chrX 126726470 126726655 -39923641 + L2c LINE L2 3134 3328 -59 3 1551 243 0 0 0 chrX 126726713 126726740 -39923556 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1551 1546 268 11 41 chrX 126727836 126728275 -39922021 - Lx8 LINE L1 -814 6659 6234 3 1551 341 226 8 50 chrX 126728351 126728472 -39921824 + Lx8 LINE L1 7353 7468 -5 3 1551 769 268 73 26 chrX 126728493 126728727 -39921569 + B4A SINE B4 5 249 -43 3 1551 22 35 0 0 chrX 126729032 126729061 -39921235 + AT_rich Low_complexity Low_complexity 1 29 0 3 1551 1124 295 67 14 chrX 126729145 126729503 -39920793 - MTE2b LTR MaLR 0 379 3 3 1551 199 324 25 85 chrX 126729839 126730038 -39920258 - L2a LINE L2 -6 3420 3234 3 1551 37936 29 0 0 chrX 126732200 126738679 -39911617 - L1Md_T LINE L1 0 6585 43 3 1551 21 0 0 0 chrX 126738841 126738862 -39911434 + AT_rich Low_complexity Low_complexity 1 21 0 3 1551 336 218 0 0 chrX 126739294 126739381 -39910915 + C-rich Low_complexity Low_complexity 6 92 0 3 1551 347 0 0 23 chrX 126739494 126739538 -39910758 + (TC)n Simple_repeat Simple_repeat 1 43 0 3 1551 189 0 0 0 chrX 126739538 126739558 -39910738 + (CA)n Simple_repeat Simple_repeat 1 21 0 3 1551 207 171 0 0 chrX 126741264 126741299 -39908997 + GA-rich Low_complexity Low_complexity 3 37 0 3 1551 21 0 0 0 chrX 126741905 126741926 -39908370 + AT_rich Low_complexity Low_complexity 1 21 0 3 1551 225 328 136 48 chrX 126742257 126742382 -39907914 + B4A SINE B4 84 219 -73 3 1551 423 0 0 0 chrX 126742656 126742703 -39907593 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 1551 274 291 110 75 chrX 126742781 126743008 -39907288 - MIR SINE MIR -13 249 15 3 1551 637 236 72 57 chrX 126743307 126743500 -39906796 + B3 SINE B2 2 197 -19 3 1551 366 23 0 0 chrX 126743634 126743677 -39906619 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1551 25 65 0 0 chrX 126744531 126744577 -39905719 + AT_rich Low_complexity Low_complexity 1 46 0 3 1551 330 26 0 0 chrX 126745650 126745689 -39904607 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1551 210 191 0 0 chrX 126745748 126745790 -39904506 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1552 221 207 51 17 chrX 126746756 126746815 -39903481 + MIR3 SINE MIR 126 186 -22 3 1552 319 250 23 0 chrX 126746971 126747059 -39903237 - L1MC1 LINE L1 -149 6195 6106 3 1552 391 217 11 11 chrX 126747192 126747285 -39903011 - L1MC1 LINE L1 -358 5975 5883 3 1552 909 295 178 12 chrX 126747348 126747674 -39902622 - MTD LTR MaLR -35 384 5 3 1552 210 37 0 0 chrX 126747792 126747819 -39902477 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1552 7164 52 1 0 chrX 126747822 126748704 -39901592 - L1Md_T LINE L1 -1 6581 5699 3 1552 184 274 0 19 chrX 126749425 126749477 -39900819 + MIR SINE MIR 98 148 -60 3 1552 204 40 0 0 chrX 126752064 126752089 -39898207 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1552 570 248 35 28 chrX 126752954 126753095 -39897201 + B3 SINE B2 2 143 -73 3 1552 328 222 0 16 chrX 126754389 126754453 -39895843 + MER5B DNA MER1_type 32 94 -84 3 1552 297 167 0 0 chrX 126754536 126754590 -39895706 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 1552 1689 174 12 73 chrX 126754669 126755011 -39895285 - ORR1A4 LTR MaLR -8 321 1 3 1552 375 320 0 10 chrX 126755385 126755486 -39894810 + PB1D10 SINE Alu 9 108 -9 3 1552 408 204 99 155 chrX 126755761 126755993 -39894303 - Lx9 LINE L1 -4 7640 7422 3 1552 265 200 0 0 chrX 126755996 126756046 -39894250 + Lx9 LINE L1 7217 7266 -378 3 1552 237 132 0 0 chrX 126756727 126756765 -39893531 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 3 1552 23 0 0 0 chrX 126757056 126757079 -39893217 + AT_rich Low_complexity Low_complexity 1 23 0 3 1552 543 160 31 23 chrX 126757079 126757207 -39893089 - Lx3_Mus LINE L1 -13 6996 6868 3 1552 29 60 0 0 chrX 126757891 126757941 -39892355 + AT_rich Low_complexity Low_complexity 1 50 0 3 1552 279 0 0 0 chrX 126757942 126757973 -39892323 + (TAAAAA)n Simple_repeat Simple_repeat 1 31 0 3 1552 211 72 23 23 chrX 126758536 126758579 -39891717 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 3 1552 498 75 0 0 chrX 126758722 126758789 -39891507 + (CA)n Simple_repeat Simple_repeat 1 67 0 3 1552 25 0 0 0 chrX 126758985 126759010 -39891286 + AT_rich Low_complexity Low_complexity 1 25 0 3 1552 705 201 0 53 chrX 126759067 126759219 -39891077 - B1_Mur3 SINE Alu -5 144 1 3 1552 24 53 0 0 chrX 126759677 126759715 -39890581 + AT_rich Low_complexity Low_complexity 1 38 0 3 1552 393 239 0 0 chrX 126759971 126760042 -39890254 - MamSINE1 SINE tRNA -200 90 20 3 1552 251 219 41 0 chrX 126761647 126761720 -39888576 + (TA)n Simple_repeat Simple_repeat 2 77 0 3 1552 2105 150 3 0 chrX 126761726 126762086 -39888210 - L1_Mur2 LINE L1 -2273 3604 3244 3 1552 521 302 28 14 chrX 126762699 126762840 -39887456 - B1F2 SINE Alu -1 148 6 3 1552 228 337 9 98 chrX 126762743 126762855 -39887441 - MT2B LTR ERVL -345 256 155 3 1552 270 357 91 21 chrX 126765162 126765348 -39884948 + LTR86A1 LTR ERVL 114 312 -201 3 1552 282 56 0 0 chrX 126765495 126765531 -39884765 + (CAGA)n Simple_repeat Simple_repeat 4 39 0 3 1552 258 116 0 0 chrX 126765536 126765579 -39884717 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 1552 3163 38 13 2 chrX 126765580 126765978 -39884318 + L1Md_F2 LINE L1 6181 6582 0 3 1552 1227 199 0 13 chrX 126766287 126766516 -39883780 - URR1A DNA MER1_type 0 226 1 3 1552 282 279 0 0 chrX 126766678 126766739 -39883557 - ID4 SINE ID -22 61 1 3 1552 302 267 13 51 chrX 126767333 126767412 -39882884 + ID SINE ID 2 77 -147 3 1552 266 197 16 47 chrX 126767355 126767419 -39882877 + tRNA-Ala-GCY_ tRNA tRNA 14 75 0 3 1552 232 385 22 11 chrX 126767918 126768010 -39882286 - L2 LINE L2 -676 2743 2651 3 1552 206 336 80 51 chrX 126768093 126768231 -39882065 - L2 LINE L2 -770 2649 2508 3 1552 201 95 78 16 chrX 126768383 126768447 -39881849 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 1552 284 348 0 73 chrX 126768749 126768873 -39881423 - PB1D7 SINE Alu -5 115 1 3 1552 624 50 0 0 chrX 126769323 126769403 -39880893 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 3 1552 1358 123 9 35 chrX 126770228 126770456 -39879840 + Lx3A LINE L1 6752 6973 -8 3 1552 28 0 0 0 chrX 126770470 126770498 -39879798 + AT_rich Low_complexity Low_complexity 1 28 0 3 1552 21 36 0 0 chrX 126770615 126770643 -39879653 + AT_rich Low_complexity Low_complexity 1 28 0 3 1552 183 80 0 0 chrX 126770838 126770863 -39879433 + (TTC)n Simple_repeat Simple_repeat 3 27 0 3 1552 292 138 0 30 chrX 126771092 126771159 -39879137 + T-rich Low_complexity Low_complexity 4 68 0 3 1552 654 319 4 131 chrX 126771161 126771406 -39878890 - ID_B1 SINE B4 -2 222 9 3 1552 368 196 39 67 chrX 126771526 126771547 -39878749 + MT2B LTR ERVL 140 157 -444 3 1552 624 58 0 0 chrX 126771547 126771633 -39878663 + B1_Mus2 SINE Alu 1 86 -61 3 1552 393 168 336 0 chrX 126771633 126771654 -39878642 + ID_B1 SINE B4 82 224 0 3 1552 1846 160 79 11 chrX 126773012 126773378 -39876918 - Lx LINE L1 0 6654 6264 3 1552 640 222 35 0 chrX 126773718 126773862 -39876434 + B1_Mur3 SINE Alu 1 149 0 3 1552 214 140 20 20 chrX 126773885 126773936 -39876360 + A-rich Low_complexity Low_complexity 4 54 0 3 1552 22 0 0 0 chrX 126773984 126774006 -39876290 + AT_rich Low_complexity Low_complexity 1 22 0 3 1552 374 127 56 0 chrX 126774040 126774111 -39876185 - B2_Mm2 SINE B2 -8 187 113 3 1552 4842 144 74 10 chrX 126774112 126775030 -39875266 - MusHAL1 LINE L1 -1336 1376 400 3 1552 293 167 0 0 chrX 126775028 126775076 -39875220 + Lx2B LINE L1 6860 6907 -93 3 1552 36 0 0 0 chrX 126775096 126775132 -39875164 + AT_rich Low_complexity Low_complexity 1 36 0 3 1552 314 282 0 55 chrX 126777023 126777132 -39873164 - PB1D10 SINE Alu 0 117 15 3 1552 649 246 23 28 chrX 126778443 126778619 -39871677 + MTEb LTR MaLR 205 379 0 3 1552 399 319 9 0 chrX 126778793 126778906 -39871390 - PB1D7 SINE Alu -6 114 1 3 1552 366 272 56 37 chrX 126780762 126780794 -39869502 + PB1D9 SINE Alu 12 120 0 3 1552 450 200 0 0 chrX 126780794 126780869 -39869427 + ID_B1 SINE B4 150 224 0 3 1552 246 156 0 0 chrX 126780873 126780918 -39869378 + GA-rich Low_complexity Low_complexity 3 47 0 3 1552 583 257 0 28 chrX 126781340 126781484 -39868812 + B1F SINE Alu 10 149 0 3 1552 563 232 99 7 chrX 126781622 126781774 -39868522 - L1MB1 LINE L1 -76 6092 5927 3 1552 456 91 0 0 chrX 126782009 126782075 -39868221 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 1552 556 218 68 0 chrX 126782399 126782546 -39867750 - L1MB1 LINE L1 -212 5956 5800 3 1552 5282 3 0 0 chrX 126783618 126784204 -39866092 + L1Md_A LINE L1 5997 6582 0 3 1552 422 340 79 5 chrX 126784586 126784775 -39865521 + ID_B1 SINE B4 5 207 -17 3 1552 471 145 0 0 chrX 126784779 126784862 -39865434 + (TG)n Simple_repeat Simple_repeat 2 84 0 3 1552 621 93 1 21 chrX 126785551 126785652 -39864644 + B1_Mus2 SINE Alu 48 148 -1 3 1552 552 209 0 17 chrX 126786173 126786290 -39864006 + PB1D9 SINE Alu 4 118 -2 3 1552 195 42 0 0 chrX 126787470 126787494 -39862802 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1552 1197 34 0 0 chrX 126787945 126788094 -39862202 + L1Md_T LINE L1 6434 6582 0 4 1552 201 94 0 0 chrX 126788981 126789013 -39861283 + (CTATA)n Simple_repeat Simple_repeat 2 33 0 4 1552 399 219 65 45 chrX 126789402 126789522 -39860774 - B1_Mur1 SINE Alu -2 147 2 4 1552 297 0 0 0 chrX 126789550 126789583 -39860713 + (TGG)n Simple_repeat Simple_repeat 1 33 0 4 1552 960 78 19 32 chrX 126789657 126789815 -39860481 - L1Md_F2 LINE L1 -4 6578 6423 4 1552 753 43 0 0 chrX 126789872 126789965 -39860331 + (TC)n Simple_repeat Simple_repeat 1 93 0 4 1552 261 0 0 0 chrX 126790995 126791024 -39859272 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 1552 967 55 94 0 chrX 126791027 126791155 -39859141 - B1_Mm SINE Alu -6 141 2 4 1552 3515 189 49 60 chrX 126791177 126791994 -39858302 + RLTR13C2 LTR ERVK 1 808 0 4 1552 217 118 19 19 chrX 126792088 126792140 -39858156 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 4 1552 369 43 0 0 chrX 126792142 126792189 -39858107 + (CATA)n Simple_repeat Simple_repeat 2 48 0 4 1552 507 177 0 0 chrX 126792650 126792746 -39857550 + (TA)n Simple_repeat Simple_repeat 1 96 0 4 1552 1070 89 7 0 chrX 126792946 126793092 -39857204 + B1_Mus2 SINE Alu 1 147 0 4 1552 345 153 0 0 chrX 126793094 126793166 -39857130 + A-rich Low_complexity Low_complexity 1 72 0 4 1552 925 292 40 21 chrX 126793199 126793524 -39856772 + MLT1B LTR MaLR 60 390 0 4 1552 324 278 112 10 chrX 126794360 126794458 -39855838 + MER44D DNA MER2_type 11 118 -587 4 1552 260 409 13 31 chrX 126794793 126794952 -39855344 - L2b LINE L2 -159 3216 3061 4 1552 180 77 0 0 chrX 126795566 126795592 -39854704 + (TAGA)n Simple_repeat Simple_repeat 4 29 0 4 1552 520 228 85 16 chrX 126796707 126796836 -39853460 - ID_B1 SINE B4 -5 219 82 4 1552 347 270 264 0 chrX 126796997 126797160 -39853136 - B3 SINE B2 -8 208 3 4 1552 320 331 19 78 chrX 126797562 126797716 -39852580 + Tigger14a DNA MER2_type 2 146 -178 4 1552 182 37 0 36 chrX 126798090 126798118 -39852178 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 4 1552 1020 66 0 28 chrX 126798321 126798462 -39851834 + B1_Mm SINE Alu 1 137 -10 4 1552 441 220 73 0 chrX 126798740 126798849 -39851447 + Tigger14a DNA MER2_type 191 307 -17 4 1552 651 278 40 6 chrX 126800442 126800616 -39849680 + MER20 DNA MER1_type 1 180 -39 4 1552 223 192 0 19 chrX 126800632 126800685 -39849611 + (CAAA)n Simple_repeat Simple_repeat 2 53 0 4 1552 25 0 0 0 chrX 126800708 126800733 -39849563 + AT_rich Low_complexity Low_complexity 1 25 0 4 1552 32 26 0 0 chrX 126802429 126802468 -39847828 + AT_rich Low_complexity Low_complexity 1 39 0 4 1552 294 29 0 0 chrX 126802837 126802872 -39847424 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1552 213 94 0 0 chrX 126803121 126803153 -39847143 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4 1552 441 379 23 0 chrX 126804285 126804462 -39845834 + MER58A DNA MER1_type 1 181 -43 4 1552 750 256 11 83 chrX 126805809 126806038 -39844258 - MTD LTR MaLR -209 198 1 4 1552 526 248 7 28 chrX 126806332 126806473 -39843823 - B1F SINE Alu -10 139 2 4 1552 1535 39 16 0 chrX 126808042 126808224 -39842072 + B2_Mm1t SINE B2 2 186 -7 4 1552 578 264 43 0 chrX 126808295 126808435 -39841861 + B1F SINE Alu 1 146 -3 4 1552 2052 144 88 8 chrX 126808729 126809094 -39841202 - ORR1B1 LTR MaLR 0 394 1 4 1552 6298 205 31 43 chrX 126809094 126810621 -39839675 - ORR1B1-int LTR MaLR 0 1509 1 4 1552 1817 160 66 9 chrX 126810621 126810956 -39839340 - ORR1B1 LTR MaLR 0 394 41 4 1552 1094 88 0 13 chrX 126810990 126811139 -39839157 - B1_Mus2 SINE Alu 0 147 1 4 1552 423 0 0 0 chrX 126811291 126811338 -39838958 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1552 217 391 60 8 chrX 126811412 126811546 -39838750 + L3 LINE CR1 3162 3302 -1187 4 1552 324 0 0 0 chrX 126811845 126811881 -39838415 + (TATG)n Simple_repeat Simple_repeat 4 39 0 4 1552 523 307 78 40 chrX 126812258 126812341 -39837955 - MARNA DNA Mariner -42 544 460 4 1552 1513 109 17 4 chrX 126812341 126812572 -39837724 + Lx LINE L1 6416 6649 -5 4 1552 523 307 78 40 chrX 126812572 126812810 -39837486 - MARNA DNA Mariner -127 459 213 4 1552 292 94 30 30 chrX 126813290 126813356 -39836940 + (CAGAGA)n Simple_repeat Simple_repeat 2 67 0 4 1552 1018 100 40 7 chrX 126815528 126815679 -39834617 + B2_Mm2 SINE B2 2 157 -38 4 1552 504 0 0 0 chrX 126815679 126815735 -39834561 + (GA)n Simple_repeat Simple_repeat 1 56 0 4 1552 247 373 0 0 chrX 126817038 126817113 -39833183 + MTEa LTR MaLR 76 150 -229 4 1552 1659 278 148 12 chrX 126817220 126817796 -39832500 - Lx8 LINE L1 -589 6884 6231 4 1552 261 0 0 0 chrX 126817812 126817841 -39832455 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 4 1552 285 318 9 43 chrX 126817879 126817994 -39832302 - Lx8 LINE L1 -739 6734 6624 4 1552 755 48 19 0 chrX 126817997 126818100 -39832196 + (TAGA)n Simple_repeat Simple_repeat 4 108 0 4 1552 368 318 68 0 chrX 126819169 126819301 -39830995 + B1F SINE Alu 2 142 -7 4 1552 342 0 0 0 chrX 126819324 126819362 -39830934 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1552 233 237 0 17 chrX 126819460 126819520 -39830776 + MER53 DNA hAT 78 136 -57 4 1552 222 156 0 0 chrX 126819543 126819588 -39830708 + T-rich Low_complexity Low_complexity 1 45 0 4 1552 1064 50 42 14 chrX 126819589 126819732 -39830564 - B1_Mm SINE Alu 0 147 1 4 1552 270 262 0 0 chrX 126819987 126820071 -39830225 + (TA)n Simple_repeat Simple_repeat 1 84 0 4 1552 655 306 162 49 chrX 126820081 126820507 -39829789 - MER21B LTR ERV1 -3 860 387 4 1552 587 254 39 113 chrX 126820598 126820802 -39829494 + ID_B1 SINE B4 2 190 -34 4 1552 519 17 0 0 chrX 126820809 126820869 -39829427 + (TC)n Simple_repeat Simple_repeat 1 60 0 4 1552 3949 139 89 47 chrX 126821051 126821909 -39828387 + RMER17A2 LTR ERVK 2 895 -11 4 1552 284 354 21 62 chrX 126822653 126822894 -39827402 - Lx8 LINE L1 -2 7471 7241 4 1552 275 322 50 56 chrX 126822902 126823063 -39827233 - Lx8 LINE L1 -417 7056 6897 4 1552 603 257 60 27 chrX 126823074 126823258 -39827038 + MER20 DNA MER1_type 9 198 -21 4 1552 258 311 19 19 chrX 126823936 126824044 -39826252 - MIR SINE MIR -31 231 124 4 1552 25 51 0 0 chrX 126824784 126824823 -39825473 + AT_rich Low_complexity Low_complexity 1 39 0 4 1552 1066 276 105 18 chrX 126826014 126826357 -39823939 - MLT2D LTR ERVL -41 373 1 4 1552 7930 35 0 0 chrX 126826629 126827565 -39822731 - L1Md_T LINE L1 0 6582 5647 4 1552 242 136 83 17 chrX 126827636 126827696 -39822600 - MLT1A0 LTR MaLR -40 325 262 4 1552 580 311 49 18 chrX 126827893 126828057 -39822239 + B3A SINE B2 4 172 -26 4 1552 667 65 0 18 chrX 126828309 126828419 -39821877 + L1Md_F2 LINE L1 6475 6582 0 4 1552 180 0 0 0 chrX 126828627 126828647 -39821649 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 1552 23 54 0 0 chrX 126828755 126828792 -39821504 + AT_rich Low_complexity Low_complexity 1 37 0 4 1552 232 365 43 30 chrX 126829238 126829402 -39820894 + MIRb SINE MIR 59 224 -44 4 1552 2087 133 17 8 chrX 126831156 126831512 -39818784 - RLTR15 LTR ERVK 0 359 1 4 1552 273 294 36 18 chrX 126831678 126831789 -39818507 + PB1D10 SINE Alu 5 117 0 4 1552 645 256 76 49 chrX 126832333 126832596 -39817700 - B4A SINE B4 -19 273 4 4 1552 395 319 168 16 chrX 126832859 126833044 -39817252 + MIRb SINE MIR 39 251 -17 4 1552 25 31 0 0 chrX 126833046 126833078 -39817218 + AT_rich Low_complexity Low_complexity 1 32 0 4 1552 404 241 0 118 chrX 126834711 126834728 -39815568 + MT2B LTR ERVL 153 154 -447 4 1552 1017 89 0 0 chrX 126834728 126834863 -39815433 + B1_Mm SINE Alu 3 137 -10 4 1552 592 204 18 0 chrX 126836348 126836461 -39813835 + PB1D9 SINE Alu 1 115 -5 4 1552 428 301 14 35 chrX 126836499 126836640 -39813656 + ID_B1 SINE B4 81 218 -6 4 1552 369 0 0 0 chrX 126836808 126836849 -39813447 + (TTG)n Simple_repeat Simple_repeat 2 42 0 4 1552 414 0 0 0 chrX 126837332 126837378 -39812918 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 1552 479 229 16 41 chrX 126837573 126837685 -39812611 + B4A SINE B4 172 284 -8 4 1552 618 14 0 0 chrX 126837685 126837756 -39812540 + (TC)n Simple_repeat Simple_repeat 2 72 0 4 1552 414 0 0 0 chrX 126837757 126837803 -39812493 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1552 324 0 0 0 chrX 126837803 126837838 -39812458 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 1552 580 324 28 0 chrX 126837989 126838165 -39812131 + MER5A DNA MER1_type 4 184 -5 4 1552 306 333 62 0 chrX 126839205 126839301 -39810995 - MER45A DNA Tip100 -55 123 22 4 1552 244 48 30 61 chrX 126840000 126840066 -39810230 + (TTTG)n Simple_repeat Simple_repeat 2 65 0 4 1552 2395 256 41 17 chrX 126840640 126841221 -39809075 - Lx6 LINE L1 -27 7433 6839 4 1552 415 167 0 0 chrX 126842605 126842677 -39807619 + MADE2 DNA Mariner 9 80 0 4 1552 441 0 0 0 chrX 126844393 126844442 -39805854 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1552 452 310 39 0 chrX 126844453 126844582 -39805714 + ID_B1 SINE B4 83 216 -8 4 1552 194 128 0 25 chrX 126845168 126845208 -39805088 + GA-rich Low_complexity Low_complexity 4 42 0 4 1552 458 176 74 42 chrX 126845795 126845890 -39804406 + PB1D10 SINE Alu 10 107 -10 4 1552 216 86 0 0 chrX 126846420 126846455 -39803841 + (CCAA)n Simple_repeat Simple_repeat 2 36 0 4 1552 365 226 156 29 chrX 126846597 126846742 -39803554 + B2_Mm2 SINE B2 1 168 -30 4 1552 270 0 0 0 chrX 126846758 126846788 -39803508 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1552 228 298 0 97 chrX 126847094 126847187 -39803109 + RSINE1 SINE B4 65 148 -17 4 1552 21 36 0 0 chrX 126847217 126847245 -39803051 + AT_rich Low_complexity Low_complexity 1 28 0 4 1552 531 0 0 0 chrX 126847944 126848003 -39802293 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 1552 551 341 62 65 chrX 126848219 126848339 -39801957 - MER58B DNA MER1_type 0 341 221 5 1552 3406 66 0 16 chrX 126848339 126848785 -39801511 + L1_Mus1 LINE L1 6129 6567 0 5 1552 551 341 62 65 chrX 126848785 126848971 -39801325 - MER58B DNA MER1_type -121 220 36 5 1552 785 209 44 92 chrX 126851007 126851234 -39799062 + B3 SINE B2 1 216 0 5 1552 12318 144 125 8 chrX 126851372 126854851 -39795445 - L1Md_F3 LINE L1 -3 6581 2650 5 1552 3920 118 51 0 chrX 126854847 126855458 -39794838 - L1Md_F3 LINE L1 -5495 1121 480 5 1552 433 162 0 0 chrX 126855458 126855532 -39794764 - L1VL1 LINE L1 -6348 74 1 5 1552 303 307 13 0 chrX 126856046 126856121 -39794175 + ID4_ SINE ID 6 81 -2 5 1552 1128 186 14 42 chrX 126856145 126856358 -39793938 + B3 SINE B2 10 216 0 5 1552 299 211 38 38 chrX 126856463 126856542 -39793754 + L1ME2 LINE L1 6047 6125 -39 5 1552 21 0 0 0 chrX 126856796 126856817 -39793479 + AT_rich Low_complexity Low_complexity 1 21 0 5 1552 699 352 64 40 chrX 126857301 126857647 -39792649 - LTR40a LTR ERVL -83 436 83 5 1552 457 357 12 6 chrX 126857950 126858122 -39792174 + Charlie26a DNA MER1_type 17 189 -136 5 1552 284 296 89 27 chrX 126858614 126858760 -39791536 + MER106A DNA MER1_type 2 156 -80 5 1552 614 60 0 39 chrX 126858777 126858881 -39791415 + (TTTC)n Simple_repeat Simple_repeat 1 100 0 5 1552 228 163 23 0 chrX 126858886 126858929 -39791367 - B1_Mur4 SINE Alu -5 145 102 5 1552 639 22 0 33 chrX 126858929 126859021 -39791275 + (TTTC)n Simple_repeat Simple_repeat 1 89 0 5 1552 228 163 23 0 chrX 126859026 126859069 -39791227 - B1_Mur4 SINE Alu -5 145 102 5 1552 675 21 0 31 chrX 126859069 126859165 -39791131 + (TTTC)n Simple_repeat Simple_repeat 1 93 0 5 1552 228 163 23 0 chrX 126859170 126859213 -39791083 - B1_Mur4 SINE Alu -5 145 102 5 1552 758 31 0 10 chrX 126859213 126859311 -39790985 + (TTTC)n Simple_repeat Simple_repeat 1 97 0 5 1552 773 199 20 0 chrX 126859331 126859477 -39790819 - B1_Mur4 SINE Alu 0 150 2 5 1552 442 351 37 114 chrX 126859963 126860262 -39790034 + B4 SINE B4 1 276 -16 5 1552 338 273 128 8 chrX 126860372 126860505 -39789791 + MER33 DNA MER1_type 2 150 -174 5 1552 3799 35 7 0 chrX 126860601 126861060 -39789236 - L1Md_F3 LINE L1 -14 6570 6109 5 1552 25 31 0 0 chrX 126862828 126862860 -39787436 + AT_rich Low_complexity Low_complexity 1 32 0 5 1552 250 26 51 0 chrX 126863095 126863134 -39787162 + (TTG)n Simple_repeat Simple_repeat 2 42 0 5 1552 243 0 0 0 chrX 126864550 126864577 -39785719 + (CAA)n Simple_repeat Simple_repeat 1 27 0 5 1552 342 0 0 0 chrX 126865156 126865194 -39785102 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1552 485 265 81 26 chrX 126865290 126865559 -39784737 - MTD LTR MaLR -20 399 18 5 1552 892 255 60 28 chrX 126866471 126866681 -39783615 + B4A SINE B4 1 217 -75 5 1552 436 308 12 30 chrX 126866681 126866845 -39783451 + RSINE1 SINE B4 3 163 -2 5 1552 259 193 17 17 chrX 126866926 126866984 -39783312 + B4A SINE B4 215 272 -20 5 1552 252 349 76 57 chrX 126868327 126868485 -39781811 - LTR88b LTR Gypsy? -372 465 305 5 1552 186 326 42 10 chrX 126868809 126868905 -39781391 - MIRm SINE MIR -1 275 177 5 1552 974 76 86 25 chrX 126868956 126869118 -39781178 - L1Md_F2 LINE L1 -4 6578 6407 5 1552 899 135 11 17 chrX 126872165 126872346 -39777950 + CT-rich Low_complexity Low_complexity 1 180 0 5 1552 1047 77 6 23 chrX 126873860 126874034 -39776262 + (TCTCCC)n Simple_repeat Simple_repeat 5 175 0 5 1552 465 133 0 0 chrX 126874068 126874143 -39776153 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 1552 302 173 0 19 chrX 126874143 126874196 -39776100 + HAL1-3A_ME LINE L1 1975 2026 -832 5 1552 25 31 0 0 chrX 126875772 126875804 -39774492 + AT_rich Low_complexity Low_complexity 1 32 0 5 1552 1154 260 99 10 chrX 126877308 126877693 -39772603 - MTD LTR MaLR 0 419 1 5 1553 568 247 126 11 chrX 126877881 126878159 -39772137 + ORR1D1 LTR MaLR 1 358 -16 5 1553 183 271 0 0 chrX 126879361 126879409 -39770887 + L2a LINE L2 3377 3424 -2 5 1553 379 271 180 33 chrX 126879528 126879890 -39770406 - L1ME4a LINE L1 -12 6112 5698 5 1553 261 250 0 0 chrX 126880027 126880103 -39770193 + (TA)n Simple_repeat Simple_repeat 1 76 0 5 1553 402 21 0 0 chrX 126880146 126880193 -39770103 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 5 1553 272 158 18 0 chrX 126880219 126880276 -39770020 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 5 1553 821 134 34 27 chrX 126880282 126880428 -39769868 - B1_Mur3 SINE Alu -2 147 1 5 1553 21 57 0 0 chrX 126880717 126880752 -39769544 + AT_rich Low_complexity Low_complexity 1 35 0 5 1553 2685 184 26 6 chrX 126881397 126881532 -39768764 - Lx5 LINE L1 -954 6096 5961 5 1553 333 0 0 0 chrX 126881532 126881569 -39768727 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 5 1553 5523 174 8 17 chrX 126881569 126882234 -39768062 - Lx5 LINE L1 -1090 5960 5292 5 1553 2035 73 0 68 chrX 126882234 126882544 -39767752 - L1_Mus2 LINE L1 -1 6565 6277 5 1553 5523 173 6 18 chrX 126882544 126882938 -39767358 - Lx5 LINE L1 -586 5291 4902 5 1553 459 350 57 80 chrX 126882970 126883234 -39767062 - MLT1F1 LTR MaLR 0 569 312 5 1553 271 290 10 61 chrX 126883236 126883335 -39766961 + MLT1A0 LTR MaLR 1 94 -271 5 1553 785 273 33 0 chrX 126883391 126883574 -39766722 + ORR1D1 LTR MaLR 1 189 -185 5 1553 225 0 0 0 chrX 126883704 126883729 -39766567 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 1553 511 300 19 32 chrX 126883823 126883978 -39766318 + RSINE1 SINE B4 3 155 -10 5 1553 603 240 103 32 chrX 126884004 126884189 -39766107 - B3A SINE B2 0 198 1 5 1553 334 232 249 34 chrX 126884403 126884608 -39765688 + Lx8 LINE L1 7200 7448 -25 5 1553 252 143 0 0 chrX 126887283 126887325 -39762971 + (TTG)n Simple_repeat Simple_repeat 2 43 0 5 1553 2131 113 6 12 chrX 126887419 126887750 -39762546 - ORR1A4 LTR MaLR 0 329 1 5 1553 233 291 37 55 chrX 126887751 126887860 -39762436 - MIR SINE MIR -67 195 89 5 1553 3269 153 5 14 chrX 126888527 126889069 -39761227 - L1_Mm LINE L1 -674 5209 4670 5 1553 315 0 0 0 chrX 126889069 126889104 -39761192 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1553 3269 153 5 14 chrX 126889104 126889150 -39761146 - L1_Mm LINE L1 -1214 4669 4626 5 1553 1618 140 0 0 chrX 126889150 126889407 -39760889 + Lx LINE L1 6386 6642 -12 5 1553 216 0 0 0 chrX 126889412 126889436 -39760860 + (CAAAT)n Simple_repeat Simple_repeat 2 25 0 5 1553 1154 107 0 6 chrX 126889462 126889640 -39760656 + (GGAA)n Simple_repeat Simple_repeat 2 178 0 5 1553 30 45 0 0 chrX 126890403 126890447 -39759849 + AT_rich Low_complexity Low_complexity 1 44 0 5 1553 504 301 30 55 chrX 126890456 126890621 -39759675 - RSINE1 SINE B4 -2 163 3 5 1553 235 26 77 0 chrX 126891137 126891176 -39759120 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 5 1553 2985 144 125 21 chrX 126891558 126892183 -39758113 - RMER6C LTR ERVK 0 690 1 5 1553 964 251 14 0 chrX 126892259 126892466 -39757830 - B3 SINE B2 -5 211 2 5 1553 216 0 0 0 chrX 126892478 126892502 -39757794 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1553 198 0 0 0 chrX 126893463 126893485 -39756811 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 5 1553 305 364 93 0 chrX 126893488 126893606 -39756690 - B1F1 SINE Alu -11 138 10 5 1553 700 200 62 0 chrX 126895025 126895155 -39755141 + B1_Mus1 SINE Alu 2 139 -9 5 1553 424 386 56 0 chrX 126895472 126895705 -39754591 - MIRb SINE MIR 0 268 23 5 1553 1726 224 22 11 chrX 126896489 126896855 -39753441 + Lx5 LINE L1 6681 7050 0 5 1553 1150 68 0 0 chrX 126897222 126897369 -39752927 + B1_Mus1 SINE Alu 1 147 -1 5 1553 216 0 0 0 chrX 126897692 126897716 -39752580 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1553 21 0 0 0 chrX 126898341 126898362 -39751934 + AT_rich Low_complexity Low_complexity 1 21 0 5 1553 245 128 0 21 chrX 126898639 126898687 -39751609 + (GAAAA)n Simple_repeat Simple_repeat 2 48 0 5 1553 1116 58 0 0 chrX 126899818 126899955 -39750341 - B1_Mm SINE Alu -9 138 2 5 1553 4055 145 39 16 chrX 126900067 126900805 -39749491 + RMER6A LTR ERVK 1 755 -1 5 1553 605 312 25 79 chrX 126901402 126901604 -39748692 - B3 SINE B2 -4 191 1 5 1553 501 222 9 9 chrX 126902326 126902435 -39747861 + MIR3 SINE MIR 72 180 -28 5 1553 26 0 0 0 chrX 126902490 126902516 -39747780 + AT_rich Low_complexity Low_complexity 1 26 0 5 1553 1094 315 66 46 chrX 126902778 126903234 -39747062 + MLT1C LTR MaLR 3 467 0 5 1553 21 0 0 0 chrX 126903338 126903359 -39746937 + AT_rich Low_complexity Low_complexity 1 21 0 5 1553 327 312 62 22 chrX 126903441 126903552 -39746744 + B1_Mus2 SINE Alu 1 123 -4 5 1553 599 360 25 44 chrX 126904019 126904336 -39745960 - ORR1E LTR MaLR -48 311 1 5 1553 964 316 111 12 chrX 126904401 126904814 -39745482 - MER31B LTR ERV1 -11 455 2 5 1553 504 0 0 0 chrX 126905786 126905842 -39744454 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1553 284 44 44 0 chrX 126907127 126907172 -39743124 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 5 1553 324 0 0 0 chrX 126907286 126907322 -39742974 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1553 295 296 10 10 chrX 126907566 126907665 -39742631 + MIRb SINE MIR 132 230 -38 5 1553 281 263 97 39 chrX 126909335 126909438 -39740858 - ORR1C1 LTR MaLR 0 378 270 5 1553 634 299 32 60 chrX 126909674 126909891 -39740405 - B3A SINE B2 -5 211 1 5 1553 240 277 0 0 chrX 126910043 126910108 -39740188 - L1MD LINE L1 -1800 4346 4282 5 1553 396 0 0 0 chrX 126910111 126910155 -39740141 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1553 855 354 8 4 chrX 126910220 126910464 -39739832 - B4A SINE B4 0 292 48 5 1553 460 281 103 13 chrX 126910605 126910839 -39739457 - L1M3 LINE L1 -2111 4029 3775 6 1553 3230 67 14 2 chrX 126911535 126911969 -39738327 + L1_Mus1 LINE L1 6129 6567 0 6 1553 872 67 0 0 chrX 126912224 126912343 -39737953 - L1_Mus2 LINE L1 0 6566 6448 6 1553 407 19 19 0 chrX 126912480 126912532 -39737764 + (TC)n Simple_repeat Simple_repeat 2 54 0 6 1553 224 219 0 0 chrX 126913513 126913554 -39736742 + (CATA)n Simple_repeat Simple_repeat 2 42 0 6 1553 292 325 46 38 chrX 126915755 126915886 -39734410 - MIR3 SINE MIR -46 162 31 6 1553 578 183 132 8 chrX 126915886 126915900 -39734396 - B2_Mm1t SINE B2 -32 161 149 6 1553 243 0 0 0 chrX 126915900 126915927 -39734369 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1553 706 101 208 0 chrX 126915927 126916048 -39734248 - B2_Mm2 SINE B2 -45 148 1 6 1553 577 119 0 19 chrX 126916135 126916238 -39734058 + (TA)n Simple_repeat Simple_repeat 2 102 0 6 1553 2321 193 46 17 chrX 126916421 126916900 -39733396 + RMER5 LTR ERV1 1 493 -41 6 1553 440 189 65 9 chrX 126916890 126916997 -39733299 + RMER5 LTR ERV1 399 511 -23 6 1553 240 121 0 65 chrX 126917011 126917061 -39733235 + GA-rich Low_complexity Low_complexity 3 49 0 6 1553 1084 99 6 11 chrX 126917061 126917235 -39733061 + (GAGAA)n Simple_repeat Simple_repeat 1 173 0 6 1553 240 121 0 65 chrX 126917235 126917246 -39733050 + polypurine Low_complexity Low_complexity 50 60 0 6 1553 22 0 0 0 chrX 126917356 126917378 -39732918 + AT_rich Low_complexity Low_complexity 1 22 0 6 1553 759 281 28 14 chrX 126917385 126917598 -39732698 + B3 SINE B2 1 216 0 6 1553 329 329 68 31 chrX 126917734 126917897 -39732399 + Tigger14a DNA MER2_type 28 196 -128 6 1553 315 0 0 0 chrX 126917908 126917943 -39732353 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1553 204 135 0 0 chrX 126919761 126919798 -39730498 + (CAT)n Simple_repeat Simple_repeat 3 39 0 6 1553 5835 12 0 0 chrX 126920582 126921238 -39729058 - L1Md_T LINE L1 0 6582 5927 6 1553 6180 82 0 0 chrX 126921238 126922099 -39728197 + L1_Mm LINE L1 1859 2719 -3164 6 1553 663 106 65 0 chrX 126922277 126922400 -39727896 - Lx9 LINE L1 -1 7643 7513 6 1553 234 291 0 37 chrX 126923885 126923967 -39726329 - MER34 LTR ERV1 -64 478 400 6 1553 408 20 0 0 chrX 126924610 126924659 -39725637 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1553 269 360 58 6 chrX 126925039 126925212 -39725084 + LSU-rRNA_Hsa rRNA rRNA 1881 2062 -2973 6 1553 341 279 13 0 chrX 126925286 126925365 -39724931 + LSU-rRNA_Hsa rRNA rRNA 1770 1849 -3186 6 1553 250 250 82 61 chrX 126925474 126925572 -39724724 - PB1D10 SINE Alu -8 109 10 6 1553 420 71 0 0 chrX 126927048 126927104 -39723192 + (CA)n Simple_repeat Simple_repeat 2 57 0 6 1553 311 292 0 0 chrX 126927170 126927242 -39723054 - L4 LINE RTE -179 1850 1779 6 1553 21 57 0 0 chrX 126928715 126928750 -39721546 + AT_rich Low_complexity Low_complexity 1 35 0 6 1553 620 333 17 80 chrX 126928867 126929154 -39721142 + B4A SINE B4 4 272 -20 6 1553 480 18 0 0 chrX 126929202 126929259 -39721037 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1553 477 34 0 0 chrX 126929259 126929317 -39720979 + (GA)n Simple_repeat Simple_repeat 2 60 0 6 1553 238 179 51 13 chrX 126929573 126929652 -39720644 + (TATAA)n Simple_repeat Simple_repeat 4 85 0 6 1553 207 139 0 0 chrX 126929655 126929691 -39720605 + (TTATA)n Simple_repeat Simple_repeat 3 38 0 6 1553 338 32 79 0 chrX 126929886 126929949 -39720347 + (TTTTTG)n Simple_repeat Simple_repeat 6 73 0 6 1553 180 0 0 0 chrX 126930300 126930320 -39719976 + (TTGG)n Simple_repeat Simple_repeat 4 23 0 6 1553 231 300 0 32 chrX 126930775 126930868 -39719428 + RMER16 LTR ERVK 57 146 -387 6 1553 213 65 0 0 chrX 126931569 126931600 -39718696 + (TCTCTG)n Simple_repeat Simple_repeat 2 32 0 6 1553 370 268 119 23 chrX 126932601 126932777 -39717519 + MamRep1161 DNA TcMar 55 247 -710 6 1553 354 286 157 26 chrX 126932602 126932832 -39717464 + MamRep1161 DNA Tigger 233 492 -465 6 1553 420 37 0 0 chrX 126933183 126933237 -39717059 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1553 193 360 32 43 chrX 126933781 126933874 -39716422 - L2c LINE L2 -44 3343 3252 6 1553 227 373 44 26 chrX 126933956 126934069 -39716227 + PB1 SINE Alu 11 125 -2 6 1553 356 311 106 27 chrX 126934283 126934515 -39715781 + L1MEg LINE L1 1328 1543 -5790 6 1553 185 196 0 19 chrX 126934871 126934923 -39715373 + CT-rich Low_complexity Low_complexity 3 53 0 6 1553 794 30 0 10 chrX 126936783 126936885 -39713411 + (GGAA)n Simple_repeat Simple_repeat 2 102 0 6 1553 250 260 18 83 chrX 126938790 126938899 -39711397 + MLT1A1 LTR MaLR 306 407 -1 6 1553 735 286 79 15 chrX 126939233 126939574 -39710722 - L1MC4 LINE L1 -498 7544 7182 6 1553 207 125 0 0 chrX 126939696 126939736 -39710560 + (CCCCCA)n Simple_repeat Simple_repeat 2 41 0 6 1553 28 29 0 0 chrX 126940147 126940182 -39710114 + AT_rich Low_complexity Low_complexity 1 35 0 6 1553 25 0 0 0 chrX 126940241 126940266 -39710030 + AT_rich Low_complexity Low_complexity 1 25 0 6 1553 269 240 0 20 chrX 126940429 126940480 -39709816 - RSINE1 SINE B4 -113 52 3 6 1553 299 288 0 24 chrX 126940684 126940766 -39709530 - B4 SINE B4 -209 83 4 6 1553 702 264 7 50 chrX 126941749 126941946 -39708350 + B3 SINE B2 5 196 -2 6 1553 4040 85 9 3 chrX 126942100 126942666 -39707630 + L1_Mus3 LINE L1 6068 6636 -2 6 1553 322 219 16 58 chrX 126943951 126944072 -39706224 - Lx8 LINE L1 0 7473 7358 6 1553 1903 165 22 72 chrX 126945202 126945606 -39704690 + ORR1C2 LTR MaLR 1 384 0 6 1553 184 270 47 16 chrX 126945621 126945685 -39704611 - L2c LINE L2 -50 3337 3272 6 1553 1373 77 22 0 chrX 126946191 126946372 -39703924 + B2_Mm2 SINE B2 2 186 -9 6 1553 207 0 0 0 chrX 126946433 126946456 -39703840 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 1553 482 57 14 0 chrX 126946461 126946531 -39703765 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 6 1553 1158 112 66 38 chrX 126946588 126946801 -39703495 + Lx3A LINE L1 6758 6976 -5 6 1553 25 0 0 0 chrX 126946802 126946827 -39703469 + AT_rich Low_complexity Low_complexity 1 25 0 6 1553 3681 214 59 34 chrX 126948216 126949098 -39701198 - Lx7 LINE L1 0 7696 6793 6 1553 240 179 0 0 chrX 126949096 126949135 -39701161 + Lx6 LINE L1 6561 6599 -861 6 1553 455 48 16 0 chrX 126949596 126949658 -39700638 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1553 4568 219 31 39 chrX 126949906 126951009 -39699287 - Lx9 LINE L1 -197 7447 6354 6 1553 243 260 62 10 chrX 126952202 126952299 -39697997 - L1MC4 LINE L1 -14 7981 7880 6 1553 576 212 81 38 chrX 126952399 126952585 -39697711 - Tigger7 DNA MER2_type -6 2485 2292 6 1553 430 262 0 0 chrX 126952586 126952670 -39697626 - Tigger7 DNA MER2_type -2324 167 84 6 1553 1171 43 0 0 chrX 126952740 126952881 -39697415 + B1_Mus2 SINE Alu 1 141 -6 6 1553 387 0 0 0 chrX 126952883 126952926 -39697370 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 6 1553 287 291 142 0 chrX 126952946 126953087 -39697209 - L1MC4 LINE L1 -272 7770 7610 6 1553 912 239 25 0 chrX 126953200 126953401 -39696895 + B3 SINE B2 1 206 -10 6 1553 188 163 23 0 chrX 126953452 126953495 -39696801 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1553 299 282 45 45 chrX 126953534 126953623 -39696673 - MLT1C LTR MaLR -357 110 22 6 1553 605 275 101 0 chrX 126954255 126954444 -39695852 + B3 SINE B2 3 210 -6 6 1553 257 368 0 0 chrX 126954966 126955042 -39695254 + B4A SINE B4 71 146 -146 6 1553 2187 135 25 6 chrX 126955119 126955477 -39694819 + ORR1B1 LTR MaLR 28 392 -2 6 1553 350 323 88 12 chrX 126955481 126955641 -39694655 + MIR SINE MIR 4 175 -87 6 1553 711 324 60 74 chrX 126956789 126957142 -39693154 - ORR1E LTR MaLR -4 355 8 6 1553 530 304 61 18 chrX 126957618 126957846 -39692450 - MLT1C LTR MaLR -136 331 94 6 1553 674 224 6 50 chrX 126958602 126958781 -39691515 - MamRep434 DNA TcMar -143 283 113 6 1553 251 327 9 53 chrX 126959758 126959871 -39690425 - ID4 SINE ID -43 109 2 6 1553 225 128 0 0 chrX 126959902 126959949 -39690347 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 6 1553 614 265 97 29 chrX 126959985 126960160 -39690136 - B4A SINE B4 0 292 106 6 1553 253 246 70 0 chrX 126960173 126960230 -39690066 - B4A SINE B4 -231 61 1 6 1553 1121 305 6 33 chrX 126961368 126961734 -39688562 - Lx5 LINE L1 0 7050 6695 6 1553 198 407 30 0 chrX 126962910 126963045 -39687251 - MIRc SINE MIR -113 155 17 6 1553 567 193 59 52 chrX 126963832 126963985 -39686311 + CR1_Mam LINE CR1 1518 1671 -533 6 1553 4831 45 0 19 chrX 126964065 126964659 -39685637 - L1_Mus1 LINE L1 0 6567 5985 6 1553 685 43 0 21 chrX 126964660 126964755 -39685541 + L1_Mm LINE L1 4120 4212 -1671 6 1553 227 342 0 25 chrX 126964777 126964897 -39685399 + CR1_Mam LINE CR1 1736 1852 -352 6 1553 292 287 58 0 chrX 126964987 126965074 -39685222 - MLT1A1 LTR MaLR -316 92 1 6 1553 446 260 15 89 chrX 126965195 126965330 -39684966 + B3A SINE B2 1 125 -73 6 1553 24 32 0 0 chrX 126965363 126965394 -39684902 + AT_rich Low_complexity Low_complexity 1 31 0 6 1553 250 388 81 13 chrX 126965787 126965936 -39684360 + MIRb SINE MIR 81 239 -29 6 1553 731 307 168 21 chrX 126966013 126966694 -39683602 - Kanga2_a DNA Tc2 -74 814 34 6 1553 405 320 101 90 chrX 126968656 126968924 -39681372 + B4 SINE B4 2 272 -20 6 1553 304 296 14 0 chrX 126969044 126969115 -39681181 + ID SINE ID 5 76 -148 6 1553 225 338 12 12 chrX 126969045 126969126 -39681170 + BC1_Mm scRNA scRNA 6 86 -66 6 1553 307 286 16 74 chrX 126970295 126970416 -39679880 + MIR3 SINE MIR 95 208 0 6 1553 305 267 241 32 chrX 126971353 126971535 -39678761 - B3 SINE B2 -1 194 1 6 1553 605 14 14 0 chrX 126972639 126972713 -39677583 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 6 1553 2042 43 12 8 chrX 126972739 126972995 -39677301 + L1Md_F3 LINE L1 6312 6568 -16 7 1553 2962 28 88 3 chrX 126973581 126973946 -39676350 - MTA_Mm LTR MaLR 0 396 1 7 1553 777 110 33 33 chrX 126975127 126975277 -39675019 + Lx3A LINE L1 6825 6974 -7 7 1553 340 303 110 21 chrX 126976066 126976211 -39674085 + RSINE1 SINE B4 2 159 -6 7 1553 333 326 34 0 chrX 126976357 126976446 -39673850 + PB1D10 SINE Alu 24 115 -2 7 1553 24 32 0 0 chrX 126976502 126976533 -39673763 + AT_rich Low_complexity Low_complexity 1 31 0 7 1553 466 344 27 32 chrX 126976550 126976736 -39673560 - MLT1C LTR MaLR 0 467 283 7 1553 294 277 11 46 chrX 126976873 126976960 -39673336 - B1F SINE Alu 0 149 66 7 1553 293 315 90 0 chrX 126976931 126977042 -39673254 - B1F1 SINE Alu -26 123 3 7 1553 574 371 113 38 chrX 126979657 126980365 -39669931 + L2 LINE L2 1892 2652 -767 7 1553 261 0 0 0 chrX 126980467 126980496 -39669800 + (TTG)n Simple_repeat Simple_repeat 2 30 0 7 1553 4220 176 41 14 chrX 126980538 126981346 -39668950 - Lx4B LINE L1 0 7058 6229 7 1553 3341 147 103 34 chrX 126981356 126982085 -39668211 - Lx4B LINE L1 -1080 5970 5192 7 1553 231 286 29 0 chrX 126983362 126983432 -39666864 - MIRb SINE MIR -68 200 129 7 1553 21 36 0 0 chrX 126983434 126983462 -39666834 + AT_rich Low_complexity Low_complexity 1 28 0 7 1553 1218 220 188 12 chrX 126983632 126983986 -39666310 - MTD LTR MaLR -14 405 1 7 1553 1450 249 144 12 chrX 126984126 126984557 -39665739 - Lx6 LINE L1 -26 7434 6947 7 1553 1119 88 0 0 chrX 126985390 126985538 -39664758 + B1_Mus1 SINE Alu 1 148 0 7 1553 269 254 0 69 chrX 126989077 126989149 -39661147 + ID4 SINE ID 1 67 -16 7 1553 464 126 11 0 chrX 126989335 126989422 -39660874 + (TG)n Simple_repeat Simple_repeat 2 89 0 7 1553 265 344 11 21 chrX 126989561 126989656 -39660640 + PB1D10 SINE Alu 15 108 -9 7 1553 3601 8 0 0 chrX 126989758 126990154 -39660142 + MTA_Mm LTR MaLR 1 396 0 7 1553 228 163 0 0 chrX 126990517 126990560 -39659736 + A-rich Low_complexity Low_complexity 1 43 0 7 1553 303 289 101 19 chrX 126990668 126990827 -39659469 + L1M5 LINE L1 5312 5483 -641 7 1553 3334 73 2 2 chrX 126991243 126991685 -39658611 - L1Md_F2 LINE L1 -3 6579 6138 7 1553 195 276 0 93 chrX 126994379 126994487 -39655809 + MIR SINE MIR 127 228 -40 7 1553 242 220 0 0 chrX 126994912 126994971 -39655325 + T-rich Low_complexity Low_complexity 1 59 0 7 1553 462 176 23 15 chrX 126996492 126996625 -39653671 + CT-rich Low_complexity Low_complexity 4 137 0 7 1553 579 53 0 0 chrX 126996647 126996722 -39653574 + (TG)n Simple_repeat Simple_repeat 2 76 0 7 1553 381 301 1 3 chrX 126997937 126998055 -39652241 - MLT1D LTR MaLR -5 500 402 7 1553 281 300 78 56 chrX 126998147 126998327 -39651969 - MLT1D LTR MaLR -270 235 52 7 1553 993 38 15 15 chrX 126998430 126998565 -39651731 + B1_Mus1 SINE Alu 14 148 0 7 1553 207 0 0 0 chrX 126998568 126998591 -39651705 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1553 333 68 0 0 chrX 126998790 126998834 -39651462 + (ATG)n Simple_repeat Simple_repeat 1 44 0 7 1553 804 276 39 43 chrX 126998938 126999347 -39650949 - MLT1D-int LTR MaLR -1086 403 2 7 1553 494 318 165 47 chrX 126999348 126999800 -39650496 - MLT1D LTR MaLR 0 505 1 7 1553 369 58 0 0 chrX 127000662 127000714 -39649582 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1553 209 270 115 39 chrX 127000754 127000858 -39649438 + L3b LINE CR1 291 402 -80 2 1553 418 248 169 87 chrX 127001646 127001818 -39648478 + B3 SINE B2 10 195 0 3 1553 25 0 0 0 chrX 127001977 127002002 -39648294 + AT_rich Low_complexity Low_complexity 1 25 0 4 1553 261 337 10 39 chrX 127002040 127002142 -39648154 - L2a LINE L2 -16 3410 3312 5 1553 1403 238 65 8 chrX 127002259 127002611 -39647685 + ORR1D1 LTR MaLR 3 374 0 6 1553 453 286 9 9 chrX 127002701 127002814 -39647482 + B3A SINE B2 3 115 -83 7 1553 510 46 0 0 chrX 127002839 127002904 -39647392 + (TA)n Simple_repeat Simple_repeat 2 66 0 8 1553 3236 43 5 10 chrX 127002910 127003308 -39646988 - MTA_Mm LTR MaLR 0 396 1 9 1553 210 267 100 0 chrX 127003348 127003408 -39646888 + ID4_ SINE ID 2 67 -16 1 1553 1713 191 59 17 chrX 127003747 127004103 -39646193 + ORR1D1 LTR MaLR 4 374 0 1 1553 1052 215 52 46 chrX 127004103 127004453 -39645843 - MTD LTR MaLR -38 381 1 1 1553 239 0 32 0 chrX 127004582 127004613 -39645683 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 1 1553 450 264 26 35 chrX 127004910 127005024 -39645272 + PB1D7 SINE Alu 1 113 -7 1 1553 185 211 16 109 chrX 127005590 127005654 -39644642 - MIRc SINE MIR -13 255 198 1 1553 472 329 107 36 chrX 127006537 127006789 -39643507 + L2c LINE L2 3100 3369 -18 1 1553 365 365 122 18 chrX 127008075 127008410 -39641886 - ORR1D2 LTR MaLR 0 370 1 1 1553 196 403 0 0 chrX 127008445 127008507 -39641789 - L2b LINE L2 -5 3370 3309 1 1553 191 204 318 0 chrX 127008612 127008700 -39641596 - L2b LINE L2 -128 3259 3144 1 194 274 359 26 0 chrX 127008706 127008784 -39641512 - ID4 SINE ID -2 81 2 1 1554 180 354 24 48 chrX 127008785 127008868 -39641428 - L2b LINE L2 -222 3153 3073 2 1554 296 351 0 0 chrX 127009319 127009393 -39640903 - ID SINE ID -149 75 2 2 1554 202 305 78 71 chrX 127009723 127009864 -39640432 + L2b LINE L2 3229 3370 -5 2 1554 513 0 0 0 chrX 127010095 127010152 -39640144 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1554 376 327 135 22 chrX 127010728 127010950 -39639346 - MIR SINE MIR -1 261 15 2 1554 566 228 0 36 chrX 127011179 127011311 -39638985 + B3 SINE B2 2 128 -67 2 1554 1338 179 29 39 chrX 127011312 127011591 -39638705 - RLTR17 LTR ERVK 0 692 417 2 1554 4730 52 0 0 chrX 127011654 127012232 -39638064 - L1Md_F2 LINE L1 -3 6579 6002 2 1554 1746 32 0 0 chrX 127012232 127012453 -39637843 + L1Md_F2 LINE L1 5767 5987 -595 2 1554 2018 171 63 19 chrX 127012453 127012865 -39637431 - RLTR17 LTR ERVK -258 434 5 2 1554 291 186 86 0 chrX 127012869 127012939 -39637357 + B3 SINE B2 135 210 -6 2 1554 2443 67 70 0 chrX 127012980 127013324 -39636972 - BGLII LTR ERVK 0 421 54 2 1554 1489 99 41 0 chrX 127013325 127013546 -39636750 - L1_Mus3 LINE L1 -203 6435 6206 2 1554 891 69 123 0 chrX 127014129 127014259 -39636037 + B1_Mm SINE Alu 1 146 -1 3 1554 781 292 41 11 chrX 127014655 127014925 -39635371 + B4 SINE B4 1 278 -14 3 1554 238 289 92 10 chrX 127015846 127015944 -39634352 - MIRc SINE MIR -22 246 141 3 1554 748 280 20 6 chrX 127016495 127016696 -39633600 + B3A SINE B2 4 211 -5 3 1554 610 284 78 18 chrX 127018119 127018338 -39631958 + MIRb SINE MIR 37 268 0 3 1554 1156 285 69 26 chrX 127018351 127018697 -39631599 - MLT1A0 LTR MaLR -2 363 3 3 1554 4689 94 68 25 chrX 127018741 127019462 -39630834 - L1_Mus3 LINE L1 -1 6637 5886 3 1554 374 195 24 0 chrX 127019477 127019559 -39630737 + L1Md_F LINE L1 654 737 -5782 3 1554 235 217 0 0 chrX 127019771 127019817 -39630479 + GA-rich Low_complexity Low_complexity 4 49 0 3 1554 891 243 0 5 chrX 127020807 127021014 -39629282 + B3 SINE B2 5 210 -6 3 1554 339 65 0 0 chrX 127021291 127021337 -39628959 + (TGG)n Simple_repeat Simple_repeat 1 46 0 4 1554 183 343 59 115 chrX 127021689 127022045 -39628251 + L2c LINE L2 3040 3375 -12 4 1554 21 0 0 0 chrX 127022228 127022249 -39628047 + AT_rich Low_complexity Low_complexity 1 21 0 4 1554 926 240 39 0 chrX 127022621 127022829 -39627467 - B3 SINE B2 0 216 1 4 1554 1129 280 68 68 chrX 127023848 127024231 -39626065 - MTD LTR MaLR 0 419 37 4 1554 809 222 115 48 chrX 127024440 127024648 -39625648 + B4 SINE B4 2 223 -69 4 1554 297 0 0 0 chrX 127024670 127024703 -39625593 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 1554 369 0 0 0 chrX 127024703 127024743 -39625553 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1554 241 268 27 40 chrX 127025789 127025863 -39624433 + MIRc SINE MIR 106 178 -90 4 1554 246 266 63 28 chrX 127026414 127026557 -39623739 - L1MC5 LINE L1 -47 7914 7767 4 1554 30 0 0 0 chrX 127026591 127026621 -39623675 + AT_rich Low_complexity Low_complexity 1 30 0 5 1554 2096 261 119 67 chrX 127027212 127028160 -39622136 + Lx8 LINE L1 6476 7473 0 5 1554 218 143 119 0 chrX 127028286 127028328 -39621968 - L2a LINE L2 -5 3421 3375 5 1554 23 0 0 0 chrX 127028931 127028954 -39621342 + AT_rich Low_complexity Low_complexity 1 23 0 5 1554 610 290 0 6 chrX 127028957 127028974 -39621322 - RSINE1 SINE B4 -6 159 144 5 1554 234 91 0 0 chrX 127028974 127029007 -39621289 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 1554 610 290 0 6 chrX 127029007 127029145 -39621151 - RSINE1 SINE B4 -22 143 6 5 1554 522 70 0 0 chrX 127029955 127030026 -39620270 + (TG)n Simple_repeat Simple_repeat 1 71 0 5 1554 495 258 54 21 chrX 127031023 127031209 -39619087 + MER53 DNA hAT 2 193 0 5 1554 336 256 67 24 chrX 127031520 127031684 -39618612 + MER5B DNA MER1_type 5 175 -3 5 1554 4495 47 2 7 chrX 127032373 127032930 -39617366 + L1_Mus1 LINE L1 6010 6563 -4 5 1554 398 269 108 0 chrX 127033943 127034036 -39616260 + PB1D7 SINE Alu 3 105 -15 6 1554 189 0 0 0 chrX 127034085 127034106 -39616190 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 6 1554 680 207 64 0 chrX 127034183 127034323 -39615973 + B1_Mur2 SINE Alu 1 149 0 6 1554 305 217 56 42 chrX 127034413 127034485 -39615811 + RSINE1 SINE B4 83 155 -10 6 1554 397 139 9 28 chrX 127034465 127034546 -39615750 + ORR1C1 LTR MaLR 285 378 0 6 1554 200 182 0 0 chrX 127034556 127034589 -39615707 + CT-rich Low_complexity Low_complexity 2 34 0 6 1554 424 291 18 18 chrX 127034589 127034701 -39615595 - B3 SINE B2 -27 189 78 6 1554 1664 110 8 23 chrX 127034737 127034998 -39615298 - L1_Mus3 LINE L1 -1 6637 6381 6 1554 377 167 81 30 chrX 127035006 127035105 -39615191 + ID_B1 SINE B4 121 224 0 6 1554 836 313 30 20 chrX 127035113 127035413 -39614883 - RMER15 LTR ERVL 0 575 273 6 1554 1312 100 16 0 chrX 127036483 127036673 -39613623 - B2_Mm2 SINE B2 -1 194 2 7 1554 414 0 0 0 chrX 127036726 127036772 -39613524 + (GA)n Simple_repeat Simple_repeat 2 47 0 7 1554 306 0 0 0 chrX 127036829 127036863 -39613433 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1554 255 31 0 0 chrX 127038894 127038926 -39611370 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 1554 243 274 211 25 chrX 127040820 127040860 -39609436 + CYRA11_Mm Unknown Y-chromosome 130 199 -418 7 1554 671 182 216 6 chrX 127040860 127041031 -39609265 - URR1A DNA MER1_type -1 225 19 7 1554 1095 95 0 7 chrX 127042473 127042622 -39607674 - B1_Mus1 SINE Alu 0 148 1 7 1554 910 255 5 5 chrX 127043026 127043231 -39607065 + B3 SINE B2 2 206 -10 7 1554 2154 192 88 10 chrX 127043598 127044088 -39606208 + RLTR11A LTR ERVK 1 528 0 7 1554 279 0 0 0 chrX 127045132 127045163 -39605133 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 1554 477 50 0 0 chrX 127045164 127045224 -39605072 + (GA)n Simple_repeat Simple_repeat 1 60 0 8 1554 212 171 0 0 chrX 127045242 127045283 -39605013 + T-rich Low_complexity Low_complexity 1 41 0 8 1554 397 296 51 107 chrX 127045651 127045829 -39604467 - ORR1E LTR MaLR -8 371 204 8 1554 435 316 18 83 chrX 127045866 127046035 -39604261 - ORR1E LTR MaLR -193 166 9 8 1554 380 329 72 145 chrX 127046099 127046444 -39603852 + ORR1E LTR MaLR 34 353 -6 8 1554 271 282 75 28 chrX 127046643 127046749 -39603547 + L2c LINE L2 3275 3385 -2 8 1554 255 191 16 0 chrX 127047543 127047606 -39602690 - L1MA9 LINE L1 -1 6311 6248 8 1554 180 0 0 0 chrX 127048387 127048407 -39601889 + (T)n Simple_repeat Simple_repeat 1 20 0 8 1554 282 29 0 0 chrX 127048414 127048449 -39601847 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 1554 423 0 0 0 chrX 127048449 127048495 -39601801 + (GA)n Simple_repeat Simple_repeat 2 48 0 8 1554 3011 64 0 2 chrX 127048676 127049086 -39601210 - L1_Mus1 LINE L1 -488 6079 5671 8 1554 3869 68 0 4 chrX 127049086 127049575 -39600721 + L1_Mus1 LINE L1 6080 6566 -1 8 1554 1584 243 65 14 chrX 127049684 127050234 -39600062 - L1MA9 LINE L1 -381 5931 5302 8 1554 2303 268 87 72 chrX 127050234 127050501 -39599795 - RMER1C Other Other -45 1297 1034 9 1554 1181 68 0 0 chrX 127050501 127050648 -39599648 + B1_Mus2 SINE Alu 1 147 0 9 1554 2303 271 84 69 chrX 127050648 127051342 -39598954 - RMER1C Other Other -309 1033 223 9 1554 256 286 0 0 chrX 127051629 127051713 -39598583 - RMER1B Other Other -928 138 55 9 1554 1096 223 4 19 chrX 127051710 127051966 -39598330 - RMER1C Other Other -1062 280 29 9 1554 482 214 18 9 chrX 127052132 127052245 -39598051 - RMER1B Other Other -354 712 599 9 1554 688 272 5 67 chrX 127052291 127052500 -39597796 - B3A SINE B2 -2 196 1 9 1554 249 305 111 24 chrX 127052501 127052709 -39597587 - L1M3 LINE L1 -751 5389 5164 9 1554 734 243 62 15 chrX 127052718 127052990 -39597306 - L1M2 LINE L1 -678 5622 5338 9 1554 355 125 0 27 chrX 127053012 127053086 -39597210 + (TA)n Simple_repeat Simple_repeat 1 72 0 9 1554 504 0 0 0 chrX 127053087 127053143 -39597153 + (TTTA)n Simple_repeat Simple_repeat 3 58 0 9 1554 463 280 0 0 chrX 127053222 127053322 -39596974 - PB1D10 SINE Alu 0 117 18 9 1554 484 264 52 0 chrX 127053358 127053551 -39596745 - L1M2 LINE L1 -1374 4769 4567 9 1554 571 348 35 35 chrX 127053565 127053854 -39596442 - Lx8 LINE L1 -91 7382 7094 1 1554 767 256 54 24 chrX 127053871 127054207 -39596089 - L1M2 LINE L1 -939 5204 4859 1 1554 486 259 69 93 chrX 127054353 127054557 -39595739 + MER58C DNA MER1_type 1 199 -16 1 1554 4797 92 9 4 chrX 127055122 127055819 -39594477 - Lx LINE L1 -74 6580 5881 1 1554 231 133 0 0 chrX 127055848 127055893 -39594403 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 1 1554 13306 102 25 27 chrX 127055896 127058923 -39591373 - Lx3A LINE L1 -6 6975 3913 1 1554 342 0 0 0 chrX 127058940 127058978 -39591318 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1554 315 0 0 0 chrX 127058978 127059012 -39591284 + (GA)n Simple_repeat Simple_repeat 1 35 0 1 1554 450 165 0 10 chrX 127059014 127059112 -39591184 - RMER1A Other Other -37 993 897 1 1554 3057 215 23 98 chrX 127060093 127060965 -39589331 - RMER1A Other Other -124 906 100 1 1554 732 225 22 48 chrX 127060965 127061178 -39589118 + MTD LTR MaLR 114 414 -5 1 1554 510 17 0 0 chrX 127061253 127061312 -39588984 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 1554 217 205 0 0 chrX 127061312 127061351 -39588945 - L3 LINE CR1 -83 4406 4368 1 1554 297 0 0 0 chrX 127063513 127063546 -39586750 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1554 366 80 0 0 chrX 127063546 127063596 -39586700 + (CCA)n Simple_repeat Simple_repeat 1 50 0 1 1554 306 0 0 0 chrX 127064980 127065014 -39585282 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1554 1247 274 102 15 chrX 127065161 127065698 -39584598 - L1MB2 LINE L1 -96 6075 5492 1 1554 1229 198 21 25 chrX 127065822 127066102 -39584194 - Lx5 LINE L1 0 7050 6772 1 1554 4462 74 2 8 chrX 127068954 127069552 -39580744 + L1Md_F2 LINE L1 5989 6582 0 1 1554 213 247 78 52 chrX 127069783 127069860 -39580436 - MIRb SINE MIR -8 260 182 1 1554 184 375 0 12 chrX 127069874 127069955 -39580341 - MIR SINE MIR -147 115 36 1 1554 338 362 26 60 chrX 127070778 127071010 -39579286 + L1MEd LINE L1 248 471 -5648 1 1554 629 221 0 65 chrX 127071952 127072107 -39578189 + B1_Mur1 SINE Alu 5 149 0 1 1554 7343 18 0 0 chrX 127072903 127073725 -39576571 - RLTR13B2 LTR ERVK 0 822 1 1 1554 1625 37 5 0 chrX 127073929 127074120 -39576176 - B2_Mm1a SINE B2 -1 192 1 1 1554 1404 243 81 3 chrX 127074196 127074543 -39575753 - ORR1D1 LTR MaLR 0 374 1 1 1554 249 231 12 60 chrX 127075256 127075281 -39575015 + MT2B2 LTR ERVL 143 217 -363 1 1554 361 148 0 0 chrX 127075281 127075335 -39574961 + B1_Mus2 SINE Alu 2 55 -92 1 1554 736 258 60 25 chrX 127075344 127075543 -39574753 - B3 SINE B2 -10 206 1 1 1554 745 160 16 0 chrX 127075609 127075734 -39574562 + B1_Mus1 SINE Alu 10 136 -12 1 1554 450 0 0 0 chrX 127075736 127075786 -39574510 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 1 1554 1196 111 28 0 chrX 127076216 127076397 -39573899 + B2_Mm2 SINE B2 1 186 -9 1 1554 30 83 0 0 chrX 127076400 127076472 -39573824 + AT_rich Low_complexity Low_complexity 1 72 0 1 1554 1050 249 42 57 chrX 127077897 127078301 -39571995 - MamRep434 DNA TcMar -28 398 1 1 1554 330 348 91 6 chrX 127079195 127079360 -39570936 + MLT1J LTR MaLR 38 216 -296 1 1554 276 313 70 39 chrX 127079423 127079579 -39570717 + MLT1J LTR MaLR 352 512 0 1 1554 359 248 64 45 chrX 127081126 127081236 -39569060 - PB1 SINE Alu -2 125 14 1 1554 302 163 32 21 chrX 127081361 127081455 -39568841 + CT-rich Low_complexity Low_complexity 3 97 0 1 1554 210 237 38 38 chrX 127081457 127081536 -39568760 - B1_Mus1 SINE Alu -21 127 49 1 1554 280 236 18 0 chrX 127081494 127081549 -39568747 - 4.5SRNA scRNA scRNA -7 87 32 1 1554 303 347 92 70 chrX 127081716 127082075 -39568221 + ORR1C1 LTR MaLR 6 372 -6 1 1554 797 179 27 7 chrX 127082327 127082473 -39567823 + B1_Mur4 SINE Alu 1 149 -1 1 1554 252 83 0 97 chrX 127082473 127082566 -39567730 + (CAAA)n Simple_repeat Simple_repeat 1 84 0 1 1554 425 294 18 0 chrX 127082756 127082865 -39567431 + PB1D9 SINE Alu 1 111 -9 1 1554 481 342 0 8 chrX 127083184 127083305 -39566991 - RSINE1 SINE B4 0 165 46 1 1554 981 266 19 74 chrX 127083439 127083748 -39566548 - B4A SINE B4 0 292 1 1 1554 514 229 101 114 chrX 127084374 127084601 -39565695 - MER58A DNA MER1_type 0 224 1 1 1554 28 0 0 0 chrX 127084985 127085013 -39565283 + AT_rich Low_complexity Low_complexity 1 28 0 1 1554 1101 52 170 0 chrX 127085069 127085222 -39565074 + B2_Mm1t SINE B2 1 179 -14 1 1554 387 124 13 0 chrX 127085249 127085313 -39564983 + B2_Mm2 SINE B2 46 115 -83 1 1554 216 0 0 0 chrX 127085327 127085351 -39564945 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1 1554 392 311 56 38 chrX 127086635 127086902 -39563394 - L1MC4 LINE L1 -337 7705 7434 1 1554 31 0 0 0 chrX 127087022 127087053 -39563243 + AT_rich Low_complexity Low_complexity 1 31 0 1 1554 270 0 0 0 chrX 127087144 127087174 -39563122 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1554 1378 187 43 148 chrX 127087180 127087625 -39562671 - RMER10B LTR ERVL 0 398 1 1 1554 1036 274 97 9 chrX 127087720 127088176 -39562120 - L1MB5 LINE L1 -8 6166 5671 1 1554 913 179 11 0 chrX 127088177 127088361 -39561935 + L1_Mur3 LINE L1 3902 4087 -1793 1 1554 4448 186 80 18 chrX 127088366 127089224 -39561072 + Lx7 LINE L1 6469 7373 -323 1 1554 2233 103 24 39 chrX 127089224 127089497 -39560799 - ORR1A2 LTR MaLR 0 327 53 1 1554 1296 85 0 74 chrX 127089497 127089700 -39560596 + B2_Mm2 SINE B2 2 189 -6 1 1554 2233 103 24 39 chrX 127089700 127089758 -39560538 - ORR1A2 LTR MaLR -275 52 1 1 1554 4448 196 73 27 chrX 127089758 127089998 -39560298 + Lx7 LINE L1 7374 7694 -2 1 1554 258 292 41 20 chrX 127090459 127090557 -39559739 - L1MB5 LINE L1 -493 5681 5582 1 1554 587 288 64 29 chrX 127090559 127090750 -39559546 - B3 SINE B2 0 195 1 1 1554 483 18 0 0 chrX 127090835 127090891 -39559405 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 1554 625 232 14 34 chrX 127090905 127091052 -39559244 - B1_Mur2 SINE Alu 0 149 6 1 1554 2776 74 124 8 chrX 127091062 127091408 -39558888 - RLTR47_MM LTR ERV1 -1 531 148 1 1554 196 30 61 0 chrX 127091408 127091441 -39558855 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1 1554 2776 74 124 8 chrX 127091441 127091570 -39558726 - RLTR47_MM LTR ERV1 -385 147 1 1 1554 244 262 87 33 chrX 127091597 127091747 -39558549 - L1MB5 LINE L1 -712 5466 5309 1 1554 798 224 218 56 chrX 127091786 127092264 -39558032 - Lx9 LINE L1 -22 7622 7067 1 1554 270 214 89 0 chrX 127092335 127092447 -39557849 - L1MB5 LINE L1 -898 5248 5127 1 1554 701 219 13 11 chrX 127092659 127092841 -39557455 - B3 SINE B2 -12 183 1 1 1554 395 38 19 0 chrX 127092908 127092961 -39557335 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 1554 477 0 0 0 chrX 127092961 127093014 -39557282 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1554 555 253 96 78 chrX 127093078 127093528 -39556768 - L1MB5 LINE L1 -1472 4674 4217 1 1554 22 0 0 0 chrX 127093773 127093795 -39556501 + AT_rich Low_complexity Low_complexity 1 22 0 1 1554 3332 46 2 0 chrX 127093797 127094192 -39556104 - MTA_Mm LTR MaLR 0 396 1 1 1554 882 192 109 15 chrX 127094310 127094511 -39555785 - MTD LTR MaLR 0 419 200 1 1554 21 0 0 0 chrX 127095042 127095063 -39555233 + AT_rich Low_complexity Low_complexity 1 21 0 1 1554 5532 24 0 2 chrX 127095148 127095782 -39554514 - L1Md_F2 LINE L1 -13 6569 5937 1 1554 234 91 0 0 chrX 127095973 127096006 -39554290 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1 1554 23 0 0 0 chrX 127096342 127096365 -39553931 + AT_rich Low_complexity Low_complexity 1 23 0 1 1554 486 315 139 17 chrX 127096597 127096891 -39553405 - L1MC4 LINE L1 -1042 7000 6671 1 1554 7411 86 9 1 chrX 127097316 127098607 -39551689 - L1_Mus3 LINE L1 -1 6637 5336 1 1554 3692 128 0 2 chrX 127098607 127099211 -39551085 + L1_Mus3 LINE L1 4754 5356 -527 1 1554 273 301 72 78 chrX 127099240 127099420 -39550876 - RLTR25B LTR ERVK 0 1028 850 1 1554 1023 54 0 15 chrX 127099776 127099908 -39550388 - B1_Mm SINE Alu -17 130 1 1 1554 369 344 55 98 chrX 127100337 127100663 -39549633 - RLTR25B LTR ERVK -716 312 1 1 1554 840 48 0 0 chrX 127100882 127100987 -39549309 + (GAA)n Simple_repeat Simple_repeat 3 107 0 1 1554 613 300 56 80 chrX 127101006 127101343 -39548953 - ORR1E LTR MaLR -6 353 25 1 1554 880 284 29 57 chrX 127101579 127101859 -39548437 - L3 LINE CR1 -133 4356 4085 1 1554 301 254 25 3 chrX 127102262 127102401 -39547895 + L1M4 LINE L1 5263 5404 -770 1 1554 281 274 12 61 chrX 127102426 127102589 -39547707 + L1M4 LINE L1 5467 5621 -562 1 1554 1155 61 0 26 chrX 127102589 127102740 -39547556 + B1_Mus2 SINE Alu 1 147 0 1 1554 311 82 27 27 chrX 127102743 127102818 -39547478 + (CAAAA)n Simple_repeat Simple_repeat 3 77 0 1 1554 302 282 49 53 chrX 127102818 127103043 -39547253 + L1M4 LINE L1 5601 5824 -350 1 1554 227 261 15 30 chrX 127103289 127103356 -39546940 - MTE2b LTR MaLR -196 183 118 1 1554 420 360 32 59 chrX 127103360 127103733 -39546563 + ORR1E LTR MaLR 1 368 -2 1 1554 287 214 178 30 chrX 127103733 127103832 -39546464 - MTE2b LTR MaLR -259 120 7 1 1554 506 326 51 64 chrX 127104816 127105111 -39545185 + B4 SINE B4 1 291 -1 1 1554 474 179 0 0 chrX 127105778 127105873 -39544423 + GA-rich Low_complexity Low_complexity 4 98 0 1 1554 728 300 97 65 chrX 127105904 127106087 -39544209 + B4 SINE B4 5 191 -101 1 1554 2442 77 9 9 chrX 127106087 127106428 -39543868 + L1_Mus1 LINE L1 6227 6567 0 1 1554 728 300 97 65 chrX 127106428 127106522 -39543774 + B4 SINE B4 192 290 -2 1 1554 1174 55 7 0 chrX 127106620 127106766 -39543530 + B1_Mm SINE Alu 1 147 0 1 1554 227 0 93 0 chrX 127106766 127106809 -39543487 + (CAA)n Simple_repeat Simple_repeat 2 48 0 1 1554 344 304 108 53 chrX 127106968 127107252 -39543044 - MLT1F1 LTR MaLR 0 555 271 1 1554 1197 61 0 0 chrX 127107288 127107436 -39542860 + B1_Mus1 SINE Alu 1 148 0 1 1554 342 0 0 0 chrX 127107554 127107592 -39542704 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1554 10207 161 11 69 chrX 127107592 127109065 -39541231 - L1_Mm LINE L1 -1659 4224 2886 1 1554 1263 125 16 0 chrX 127109065 127109257 -39541039 - B2_Mm2 SINE B2 0 195 1 1 1554 10207 161 11 69 chrX 127109257 127110136 -39540160 - L1_Mm LINE L1 -2998 2885 2010 1 1554 1425 39 50 0 chrX 127110332 127110514 -39539782 + B2_Mm1a SINE B2 2 192 -1 1 1554 1491 249 78 13 chrX 127111689 127112072 -39538224 - MTD LTR MaLR 0 419 12 1 1554 1081 120 96 18 chrX 127112189 127112409 -39537887 - Lx3B LINE L1 -1 6972 6736 1 1554 22 0 0 0 chrX 127112564 127112586 -39537710 + AT_rich Low_complexity Low_complexity 1 22 0 2 1554 3611 121 87 3 chrX 127113881 127114478 -39535818 + Lx4A LINE L1 6357 7003 -55 2 1554 26 30 0 0 chrX 127114478 127114511 -39535785 + AT_rich Low_complexity Low_complexity 1 33 0 2 1554 803 266 45 5 chrX 127114513 127114713 -39535583 - B3 SINE B2 -6 210 3 2 1554 484 301 109 9 chrX 127115920 127116141 -39534155 + HAL1 LINE L1 1121 1363 -1144 2 1554 789 158 277 0 chrX 127116246 127116423 -39533873 + URR1A DNA MER1_type 1 226 0 2 1554 425 325 25 21 chrX 127116443 127116723 -39533573 + HAL1 LINE L1 1538 1818 -689 2 1554 805 188 34 14 chrX 127117028 127117174 -39533122 + B1_Mur2 SINE Alu 1 149 0 2 1554 280 252 88 54 chrX 127117190 127117337 -39532959 + MER33 DNA MER1_type 65 216 -108 2 1554 1355 158 5 0 chrX 127117497 127117718 -39532578 + URR1B DNA MER1_type 4 225 0 2 1554 687 306 94 12 chrX 127118036 127118104 -39532192 - RMER15 LTR ERVL -1 574 497 2 1554 423 0 0 0 chrX 127118104 127118151 -39532145 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2 1554 687 306 94 12 chrX 127118151 127118337 -39531959 - RMER15 LTR ERVL -79 496 299 2 1554 270 263 83 71 chrX 127118354 127118522 -39531774 - RMER15 LTR ERVL -399 176 7 2 1554 28 29 0 0 chrX 127118715 127118750 -39531546 + AT_rich Low_complexity Low_complexity 1 35 0 2 1554 498 46 0 0 chrX 127118900 127118965 -39531331 + (GA)n Simple_repeat Simple_repeat 1 65 0 2 1554 459 0 0 0 chrX 127119196 127119247 -39531049 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1554 227 379 34 8 chrX 127119510 127119627 -39530669 + L3b LINE CR1 269 388 -94 2 1554 1129 71 0 0 chrX 127120097 127120238 -39530058 + B1_Mus1 SINE Alu 1 141 -7 2 1554 279 0 0 0 chrX 127120242 127120273 -39530023 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1554 755 176 37 22 chrX 127120283 127120417 -39529879 + B1_Mur3 SINE Alu 1 136 -13 2 1554 248 0 0 30 chrX 127120420 127120453 -39529843 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 1554 1491 32 26 11 chrX 127121121 127121150 -39529146 - B2_Mm1a SINE B2 0 193 161 2 1554 207 0 0 0 chrX 127121150 127121173 -39529123 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 2 1554 1491 32 26 11 chrX 127121173 127121333 -39528963 - B2_Mm1a SINE B2 -33 160 1 2 1554 2917 91 19 5 chrX 127121345 127121764 -39528532 - L1_Mus4 LINE L1 -8 6630 6206 2 1554 3878 49 82 2 chrX 127121767 127122281 -39528015 + LTRIS2 LTR ERV1 10 564 0 2 1554 17114 123 54 10 chrX 127122281 127123571 -39526725 - L1_Mus4 LINE L1 -426 6210 4895 2 1554 4627 47 28 2 chrX 127123571 127124143 -39526153 + LTRIS_Mus LTR ERV1 1 587 0 2 1554 17114 162 85 12 chrX 127124143 127126681 -39523615 - L1_Mus4 LINE L1 -989 4894 2111 2 1554 1074 90 14 7 chrX 127126681 127126826 -39523470 - B1_Mus2 SINE Alu 0 147 2 2 1554 17114 162 85 12 chrX 127126826 127127053 -39523243 - L1_Mus4 LINE L1 -3773 2110 1887 2 1554 5582 122 23 4 chrX 127127040 127128219 -39522077 - L1VL2 LINE L1 -2317 1298 95 2 1554 186 128 0 0 chrX 127128590 127128629 -39521667 + (T)n Simple_repeat Simple_repeat 1 39 0 2 1554 1197 68 0 0 chrX 127128630 127128776 -39521520 - B1_Mus2 SINE Alu -1 146 1 2 1554 2018 148 35 153 chrX 127129199 127129348 -39520948 - RLTR23 LTR ERV1 -2 428 281 2 1554 4486 70 3 50 chrX 127129348 127129964 -39520332 + LTRIS_Mus LTR ERV1 1 587 0 2 1554 2018 148 35 153 chrX 127129964 127130299 -39519997 - RLTR23 LTR ERV1 -150 280 1 2 1554 1220 273 42 75 chrX 127130682 127131082 -39519214 + MLT1B LTR MaLR 4 390 0 2 1554 237 315 11 32 chrX 127131120 127131215 -39519081 + MIR SINE MIR 147 239 -23 2 1554 297 0 0 0 chrX 127132360 127132393 -39517903 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1554 2444 117 53 80 chrX 127132474 127132911 -39517385 + RLTR23 LTR ERV1 6 430 0 2 1554 25 51 0 0 chrX 127134203 127134242 -39516054 + AT_rich Low_complexity Low_complexity 1 39 0 2 1554 580 274 78 26 chrX 127134281 127134472 -39515824 + Tigger7 DNA MER2_type 2281 2481 -10 2 1554 347 41 20 0 chrX 127134487 127134536 -39515760 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 2 1554 287 308 26 0 chrX 127134977 127135055 -39515241 - MIR3 SINE MIR -19 189 110 2 1554 432 0 0 0 chrX 127136791 127136839 -39513457 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 1554 198 0 0 0 chrX 127136839 127136860 -39513436 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 1554 453 365 32 5 chrX 127138451 127138671 -39511625 + MIRb SINE MIR 7 232 -36 2 1554 206 159 23 0 chrX 127138746 127138790 -39511506 + T-rich Low_complexity Low_complexity 4 48 0 2 194 623 311 72 92 chrX 127139802 127140149 -39510147 + ORR1E LTR MaLR 1 340 -19 2 1555 205 316 38 38 chrX 127140808 127140887 -39509409 - MIRm SINE MIR -111 165 87 2 1555 366 191 239 22 chrX 127141626 127141760 -39508536 - MER5A1 DNA MER1_type -1 165 3 2 1555 259 331 56 28 chrX 127142177 127142320 -39507976 - MIR SINE MIR -56 206 60 2 1555 184 362 60 55 chrX 127142706 127142905 -39507391 + MIRb SINE MIR 30 229 -39 2 1555 519 278 71 6 chrX 127142984 127143154 -39507142 + MER5A DNA MER1_type 2 182 -7 2 1555 22291 4 0 1 chrX 127143874 127147205 -39503091 - L1Md_A LINE L1 0 6582 3256 2 1555 222 128 0 0 chrX 127147943 127147982 -39502314 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1555 387 203 30 38 chrX 127148000 127148110 -39502186 + PB1D10 SINE Alu 14 127 0 2 1555 258 293 0 0 chrX 127148380 127148438 -39501858 + ID4_ SINE ID 9 66 -17 2 1555 360 323 66 8 chrX 127148577 127148836 -39501460 - L1MB5 LINE L1 0 6174 5901 2 1555 217 200 22 0 chrX 127148852 127148897 -39501399 - B4 SINE B4 -245 47 2 2 1555 711 272 59 44 chrX 127148906 127149207 -39501089 - L1MB5 LINE L1 -278 5896 5475 2 1555 243 0 0 0 chrX 127149207 127149234 -39501062 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1555 711 246 77 64 chrX 127149234 127149522 -39500774 - L1MB5 LINE L1 -710 5474 5193 2 1555 500 401 20 0 chrX 127149661 127149858 -39500438 + MLT1I LTR MaLR 211 411 0 2 1555 528 137 0 13 chrX 127149883 127149976 -39500320 - ORR1C2 LTR MaLR 0 384 288 2 1555 385 138 267 105 chrX 127149972 127150077 -39500219 - ORR1C2 LTR MaLR -256 122 1 2 1555 340 225 12 48 chrX 127150214 127150264 -39500032 + ID4_ SINE ID 2 48 -35 2 1555 1290 234 67 36 chrX 127150264 127150623 -39499673 + ORR1D2 LTR MaLR 1 370 0 2 1555 340 244 8 49 chrX 127150623 127150670 -39499626 + ID4_ SINE ID 48 92 -60 2 1555 765 191 0 21 chrX 127150737 127150881 -39499415 + B1_Mur3 SINE Alu 2 142 -7 2 1555 7264 103 18 5 chrX 127151036 127152092 -39498204 - Lx2 LINE L1 0 6997 5928 2 1555 194 315 42 92 chrX 127152996 127153115 -39497181 - L2c LINE L2 -1 3386 3274 2 1555 332 286 12 0 chrX 127154016 127154100 -39496196 + Tigger5 DNA MER2_type 2319 2403 -3 2 1555 1111 240 73 109 chrX 127154376 127154760 -39495536 - MTE2a LTR MaLR 0 379 10 2 1555 4966 143 8 43 chrX 127155381 127155829 -39494467 + Lx3C LINE L1 4997 5412 -474 2 1555 3930 55 2 2 chrX 127155829 127156316 -39493980 - L1_Mus2 LINE L1 -4 6562 6076 2 1555 5763 129 98 29 chrX 127156316 127157586 -39492710 + Lx3C LINE L1 5413 6773 -203 2 1555 187 310 17 0 chrX 127157587 127157645 -39492651 - MIR SINE MIR -99 163 105 2 1555 3407 88 23 0 chrX 127157647 127158124 -39492172 + L1_Mus3 LINE L1 6151 6638 0 2 1555 183 42 0 0 chrX 127158132 127158156 -39492140 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1555 207 88 0 0 chrX 127158170 127158204 -39492092 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 2 1555 2804 117 11 22 chrX 127158233 127158679 -39491617 + BGLII_B LTR ERVK 1 441 0 2 1555 665 274 42 16 chrX 127158784 127159092 -39491204 + Lx9 LINE L1 7329 7644 0 2 1555 225 317 57 24 chrX 127159099 127159222 -39491074 + MER5A1 DNA MER1_type 40 166 0 2 1555 1044 224 10 0 chrX 127159347 127159539 -39490757 + B3 SINE B2 16 209 -7 2 1555 657 331 36 16 chrX 127159743 127159936 -39490360 + B3A SINE B2 1 197 -1 2 1555 327 294 50 42 chrX 127160047 127160288 -39490008 + L1ME4a LINE L1 5621 5863 -261 2 1555 418 302 59 0 chrX 127160395 127160514 -39489782 + MLT1D LTR MaLR 24 149 -356 2 1555 767 313 5 0 chrX 127160560 127160755 -39489541 + B3 SINE B2 11 206 -10 2 1555 186 43 0 0 chrX 127160765 127160788 -39489508 + (GGAA)n Simple_repeat Simple_repeat 3 25 0 2 1555 360 0 0 0 chrX 127160788 127160828 -39489468 + (GA)n Simple_repeat Simple_repeat 2 41 0 2 1555 1059 82 0 0 chrX 127160828 127160975 -39489321 + (GGGAA)n Simple_repeat Simple_repeat 5 151 0 2 1555 213 132 0 0 chrX 127160975 127161013 -39489283 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 2 1555 311 289 56 14 chrX 127161603 127161747 -39488549 - L1M5 LINE L1 -428 5696 5547 2 1555 21 36 0 0 chrX 127161885 127161913 -39488383 + AT_rich Low_complexity Low_complexity 1 28 0 2 1555 1273 91 37 0 chrX 127161989 127162176 -39488120 + B2_Mm2 SINE B2 2 195 0 2 1555 238 238 158 26 chrX 127162189 127162301 -39487995 - Lx9 LINE L1 -31 7613 7482 2 1555 975 231 14 45 chrX 127162301 127162523 -39487773 + B3 SINE B2 1 215 -1 2 1555 238 238 158 26 chrX 127162523 127162600 -39487696 - Lx9 LINE L1 -163 7481 7399 2 1555 201 39 0 0 chrX 127162939 127162965 -39487331 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 2 1555 726 226 0 0 chrX 127162973 127163119 -39487177 - B1_Mus2 SINE Alu -1 146 1 2 1555 221 0 0 33 chrX 127164054 127164084 -39486212 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1555 263 28 0 27 chrX 127164264 127164301 -39485995 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2 1555 418 219 0 12 chrX 127164564 127164647 -39485649 - ID4_ SINE ID -1 82 1 2 1555 822 255 5 74 chrX 127164881 127165084 -39485212 + B3A SINE B2 1 189 -9 2 1555 472 272 56 0 chrX 127165101 127165226 -39485070 - B1_Mur2 SINE Alu -13 136 5 2 1555 21 36 0 0 chrX 127165392 127165420 -39484876 + AT_rich Low_complexity Low_complexity 1 28 0 2 1555 952 137 0 97 chrX 127165420 127165546 -39484750 - URR1B DNA MER1_type -1 224 113 2 1555 1646 75 0 0 chrX 127165546 127165760 -39484536 - L1_Mus2 LINE L1 0 6566 6353 2 1555 952 137 0 97 chrX 127165760 127165819 -39484477 - URR1B DNA MER1_type -113 112 57 2 1555 1155 68 7 0 chrX 127165823 127165969 -39484327 + B1_Mus1 SINE Alu 2 148 0 2 1555 360 212 15 0 chrX 127165996 127166062 -39484234 - URR1B DNA MER1_type -158 67 1 2 1555 544 250 103 0 chrX 127166069 127166185 -39484111 - RSINE1 SINE B4 -33 132 5 2 1555 325 291 0 12 chrX 127166246 127166326 -39483970 + ID4_ SINE ID 2 80 -3 2 1555 714 253 240 50 chrX 127166356 127166656 -39483640 + ORR1A4 LTR MaLR 1 357 -2 3 1555 1143 72 0 0 chrX 127166878 127167017 -39483279 - B1_Mus1 SINE Alu -9 139 1 3 1555 317 309 8 83 chrX 127167363 127167483 -39482813 - L2c LINE L2 -1 3386 3276 3 1555 218 32 0 31 chrX 127167502 127167534 -39482762 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 3 1555 443 371 98 14 chrX 127167626 127168055 -39482241 - L2c LINE L2 -422 2997 2533 3 1555 250 299 0 0 chrX 127168117 127168184 -39482112 + ID4_ SINE ID 4 70 -13 3 1555 252 317 0 0 chrX 127168136 127168196 -39482100 + ID SINE ID 24 83 -141 3 1555 336 329 7 27 chrX 127168280 127168427 -39481869 + MLT1F2 LTR MaLR 417 560 0 3 1555 738 0 0 0 chrX 127168526 127168608 -39481688 + (TTC)n Simple_repeat Simple_repeat 3 84 0 3 1555 1349 69 0 6 chrX 127168612 127168788 -39481508 - B2_Mm2 SINE B2 -19 176 2 3 1555 267 31 0 0 chrX 127168800 127168832 -39481464 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 3 1555 2583 135 5 29 chrX 127168832 127169252 -39481044 - Lx3C LINE L1 -16 6960 6551 3 1555 6105 194 59 90 chrX 127169520 127171445 -39478851 + ORR1A4-int LTR MaLR 1 1771 -192 3 1555 1200 41 7 0 chrX 127171445 127171591 -39478705 - B1_Mm SINE Alu 0 147 1 3 1555 2035 155 68 134 chrX 127171591 127171755 -39478541 + ORR1A4-int LTR MaLR 1332 1509 0 3 1555 1975 131 28 18 chrX 127171755 127171930 -39478366 + ORR1A4 LTR MaLR 1 181 -148 3 1555 2797 62 59 3 chrX 127171930 127172305 -39477991 + MTA_Mm LTR MaLR 1 396 0 3 1555 1975 131 28 18 chrX 127172305 127172455 -39477841 + ORR1A4 LTR MaLR 182 329 0 3 1555 374 350 39 86 chrX 127172588 127172844 -39477452 + ORR1E LTR MaLR 4 247 -112 3 1555 1016 254 72 32 chrX 127173093 127173438 -39476858 + ORR1E LTR MaLR 1 359 0 3 1555 288 402 37 106 chrX 127173440 127173790 -39476506 - MLT2B3 LTR ERVL -199 355 30 3 1555 769 293 26 23 chrX 127173829 127174094 -39476202 + MLT1F-int LTR MaLR 324 589 -900 3 1555 625 289 90 20 chrX 127174101 127174263 -39476033 + B3 SINE B2 2 177 -39 3 1555 396 40 0 0 chrX 127174263 127174313 -39475983 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1555 625 289 90 20 chrX 127174313 127174351 -39475945 + B3 SINE B2 178 215 -1 3 1555 270 345 105 66 chrX 127174407 127174693 -39475603 + MLT1F-int LTR MaLR 1193 1489 0 3 1555 1270 328 124 4 chrX 127174693 127175177 -39475119 + MLT1F LTR MaLR 1 542 -6 3 1555 2802 216 126 11 chrX 127175185 127175997 -39474299 - Arthur1 DNA Tip100 -120 3827 2923 3 1555 1095 336 55 43 chrX 127176008 127176536 -39473760 + MLT2B3 LTR ERVL 1 547 -20 3 1555 184 341 85 0 chrX 127176716 127176798 -39473498 - L2 LINE L2 -906 2513 2425 3 1555 1742 137 8 123 chrX 127176943 127177301 -39472995 + ORR1B1 LTR MaLR 5 321 -8 3 1555 8624 159 66 65 chrX 127177305 127179264 -39471032 + ORR1B1-int LTR MaLR 1 1961 -2 3 1555 1769 194 70 18 chrX 127179265 127179606 -39470690 + ORR1B1 LTR MaLR 34 392 -2 3 1555 335 271 41 20 chrX 127179675 127179773 -39470523 - PB1D7 SINE Alu -1 119 20 3 1555 307 349 49 44 chrX 127179773 127179956 -39470340 - L2 LINE L2 -1068 2351 2168 3 1555 305 317 14 0 chrX 127180354 127180496 -39469800 + L1M3 LINE L1 5592 5735 -454 3 1555 1974 194 27 22 chrX 127180513 127180741 -39469555 + MTC LTR MaLR 1 231 -190 3 1555 2889 28 96 0 chrX 127180741 127181095 -39469201 + RLTR10 LTR ERVK 1 388 -2 3 1555 1974 194 27 22 chrX 127181095 127181267 -39469029 + MTC LTR MaLR 232 403 -18 3 1555 377 252 0 19 chrX 127181372 127181496 -39468800 + MTD LTR MaLR 1 120 -299 3 1555 1377 248 10 0 chrX 127181504 127181803 -39468493 - Lx6 LINE L1 -4 7456 7155 3 1555 734 290 137 33 chrX 127181805 127182076 -39468220 + MTD LTR MaLR 108 406 -13 3 1555 3258 26 37 0 chrX 127182125 127182507 -39467789 - MTA_Mm LTR MaLR 0 396 1 3 1555 9429 24 1 1 chrX 127182509 127183605 -39466691 - MTA_Mm-int LTR MaLR -2 1096 1 3 1555 3258 26 37 0 chrX 127183605 127183987 -39466309 - MTA_Mm LTR MaLR 0 396 1 3 1555 225 0 0 0 chrX 127184281 127184306 -39465990 + (CAAAAA)n Simple_repeat Simple_repeat 3 27 0 3 1555 530 263 37 23 chrX 127184309 127184471 -39465825 + ID_B1 SINE B4 81 247 -45 3 1555 655 335 67 29 chrX 127185837 127186178 -39464118 - MER21B LTR ERV1 -103 760 407 3 1555 210 62 61 20 chrX 127187058 127187107 -39463189 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 3 1555 2013 184 24 51 chrX 127187238 127187651 -39462645 - MTD LTR MaLR -16 403 2 3 1555 197 241 68 17 chrX 127187938 127187997 -39462299 - MIR3 SINE MIR -15 193 132 3 1555 394 216 170 9 chrX 127188529 127188641 -39461655 - Tigger7 DNA MER2_type -230 2261 2132 3 1555 707 298 109 28 chrX 127188641 127188924 -39461372 - Tigger7 DNA MER2_type -2183 308 3 3 1555 24 32 0 0 chrX 127189366 127189397 -39460899 + AT_rich Low_complexity Low_complexity 1 31 0 3 1555 1033 238 0 0 chrX 127189850 127190060 -39460236 + B3 SINE B2 1 210 -6 3 1555 352 237 0 73 chrX 127190347 127190429 -39459867 + B3A SINE B2 2 77 -121 3 1555 1404 203 187 50 chrX 127190430 127190930 -39459366 - RMER4B LTR ERVK 0 585 17 3 1555 328 296 93 25 chrX 127190937 127191055 -39459241 + B3A SINE B2 72 197 -1 3 1555 588 271 0 15 chrX 127191088 127191223 -39459073 + B3 SINE B2 84 216 0 3 1555 1052 235 20 6 chrX 127191372 127191689 -39458607 + Lx9 LINE L1 5599 5955 -1689 3 1555 299 270 0 96 chrX 127191686 127191821 -39458475 + Lx9 LINE L1 6957 7078 -566 3 1555 452 200 10 10 chrX 127191856 127191952 -39458344 + ORR1D1 LTR MaLR 239 334 -40 3 1555 306 0 0 0 chrX 127191973 127192007 -39458289 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1555 395 317 26 46 chrX 127192195 127192347 -39457949 - MLT1A1 LTR MaLR -259 149 1 3 1555 324 0 0 0 chrX 127193185 127193221 -39457075 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1555 468 215 97 24 chrX 127193734 127193858 -39456438 - ID_B1 SINE B4 -1 223 91 3 1555 241 250 32 74 chrX 127193801 127193896 -39456400 + YREP_Mm Unknown Unknown 251 341 -1471 3 1555 587 335 42 101 chrX 127193928 127194214 -39456082 + B4 SINE B4 8 276 -16 3 1555 218 95 0 23 chrX 127194316 127194359 -39455937 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 3 1555 412 286 111 23 chrX 127194371 127194543 -39455753 + B3A SINE B2 1 187 -11 3 1555 380 310 26 0 chrX 127194576 127194689 -39455607 + PB1D10 SINE Alu 1 116 -1 3 1555 287 231 176 0 chrX 127194949 127195040 -39455256 - MIRb SINE MIR -139 129 23 3 1555 413 309 53 7 chrX 127195376 127195526 -39454770 + RCHARR1 DNA MER1_type 1 157 -817 3 1555 809 218 0 152 chrX 127195983 127196194 -39454102 + ID_B1 SINE B4 17 195 -29 3 1555 243 0 0 0 chrX 127196194 127196221 -39454075 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 3 1555 2295 273 93 19 chrX 127196233 127197014 -39453282 + RCHARR1 DNA MER1_type 135 973 -1 3 1555 290 356 219 38 chrX 127197260 127197630 -39452666 + L2c LINE L2 2727 3163 -224 3 1555 402 359 156 10 chrX 127198089 127198405 -39451891 + MLT1J2 LTR MaLR 66 429 -19 3 1555 351 0 0 0 chrX 127198655 127198694 -39451602 + (A)n Simple_repeat Simple_repeat 1 39 0 3 1555 320 237 18 110 chrX 127199370 127199479 -39450817 + PB1D10 SINE Alu 1 99 -18 3 1555 196 314 168 32 chrX 127199853 127199978 -39450318 + MIRb SINE MIR 125 266 -2 3 1555 615 78 0 10 chrX 127200578 127200682 -39449614 - L1_Mus3 LINE L1 -3 6635 6533 3 1555 335 346 110 6 chrX 127200747 127200910 -39449386 + LTR16E2 LTR ERVL 3 182 -386 3 1555 348 278 115 33 chrX 127201015 127201197 -39449099 + LTR16E2 LTR ERVL 367 563 -5 3 1555 1789 165 16 25 chrX 127202030 127202347 -39447949 + ORR1B1 LTR MaLR 41 354 -40 3 1555 1296 85 11 6 chrX 127202348 127202526 -39447770 + B2_Mm1t SINE B2 1 179 -14 3 1555 323 81 12 11 chrX 127202563 127202652 -39447644 + B2_Mm2 SINE B2 47 174 -21 3 1555 714 24 0 0 chrX 127202653 127202737 -39447559 + (GA)n Simple_repeat Simple_repeat 1 84 0 3 1555 306 156 0 0 chrX 127202738 127202783 -39447513 + ORR1B1 LTR MaLR 315 359 -8 3 1555 298 327 46 9 chrX 127202878 127202986 -39447310 + ID_B1 SINE B4 80 191 -33 3 1555 252 232 102 31 chrX 127203016 127203114 -39447182 + B3 SINE B2 97 201 -15 3 1555 207 0 0 0 chrX 127203131 127203154 -39447142 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1555 303 228 50 12 chrX 127203156 127203172 -39447124 + ID_B1 SINE B4 141 223 -1 3 1555 309 156 109 0 chrX 127203172 127203236 -39447060 + B1_Mur1 SINE Alu 78 148 -1 3 1555 751 241 95 16 chrX 127203482 127203672 -39446624 - B3 SINE B2 -9 207 3 3 1555 234 91 0 0 chrX 127204058 127204091 -39446205 + (TTTTC)n Simple_repeat Simple_repeat 4 36 0 3 1555 376 178 11 0 chrX 127204664 127204754 -39445542 - L1Md_F2 LINE L1 -1 6581 6491 3 1555 423 167 26 0 chrX 127205044 127205122 -39445174 - B1_Mur4 SINE Alu 0 150 71 3 1555 973 59 79 36 chrX 127205320 127205448 -39444848 + B1_Mus2 SINE Alu 1 139 -8 3 1555 306 0 0 0 chrX 127205448 127205482 -39444814 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 3 1555 973 59 79 36 chrX 127205482 127205493 -39444803 + B1_Mus2 SINE Alu 140 146 -1 3 1555 883 102 0 0 chrX 127206050 127206178 -39444118 - BGLII LTR ERVK 0 421 294 3 1555 2975 91 39 41 chrX 127206294 127206777 -39443519 + RLTR45 LTR ERVK 1 482 0 3 1555 235 185 54 36 chrX 127206787 127206843 -39443453 + PB1D10 SINE Alu 59 115 -2 3 1555 243 117 31 62 chrX 127206847 127206911 -39443385 + (CAAA)n Simple_repeat Simple_repeat 2 63 0 3 1555 378 0 0 0 chrX 127206923 127206965 -39443331 + (CAAAC)n Simple_repeat Simple_repeat 5 46 0 3 1555 441 0 0 0 chrX 127208378 127208427 -39441869 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 1555 22 0 0 0 chrX 127209373 127209395 -39440901 + GC_rich Low_complexity Low_complexity 1 22 0 3 1555 456 225 187 53 chrX 127210471 127210621 -39439675 + MER58A DNA MER1_type 43 212 -12 3 1555 823 275 38 10 chrX 127211134 127211343 -39438953 + B3 SINE B2 1 215 -1 3 1555 987 73 81 0 chrX 127211349 127211485 -39438811 + B1_Mus1 SINE Alu 2 148 0 3 1555 247 238 16 0 chrX 127211485 127211560 -39438736 + A-rich Low_complexity Low_complexity 1 76 0 3 1555 235 235 0 19 chrX 127211984 127212036 -39438260 - MER5A1 DNA MER1_type -50 116 66 3 1555 21 0 0 0 chrX 127212308 127212329 -39437967 + AT_rich Low_complexity Low_complexity 1 21 0 3 1555 414 221 93 2 chrX 127212341 127212495 -39437801 - Lx3C LINE L1 -1 6999 6823 3 1555 1038 174 9 27 chrX 127212516 127212735 -39437561 + Lx3C LINE L1 6523 6737 -239 3 1555 1250 107 27 0 chrX 127213887 127214074 -39436222 - B2_Mm1t SINE B2 0 193 2 3 1555 253 297 104 35 chrX 127214314 127214429 -39435867 - MER63B DNA AcHobo -5 431 309 3 1555 387 313 60 24 chrX 127214601 127214771 -39435525 - L2c LINE L2 -1 3386 3189 3 1555 25 31 0 0 chrX 127215391 127215423 -39434873 + AT_rich Low_complexity Low_complexity 1 32 0 3 1555 419 342 57 8 chrX 127216211 127216473 -39433823 + Lx8 LINE L1 7165 7439 -34 3 1555 439 381 27 14 chrX 127216858 127217079 -39433217 + L2 LINE L2 2644 2867 -552 3 1555 1698 211 39 6 chrX 127217381 127217715 -39432581 + MTC LTR MaLR 1 345 -76 4 1555 744 125 0 7 chrX 127217722 127217867 -39432429 + Lx3_Mus LINE L1 6866 7009 0 4 1555 24 53 0 0 chrX 127217893 127217931 -39432365 + AT_rich Low_complexity Low_complexity 1 38 0 4 1555 1259 254 43 70 chrX 127218141 127218767 -39431529 - L1ME1 LINE L1 -310 5869 5261 4 1555 243 0 0 0 chrX 127218822 127218849 -39431447 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 1555 824 302 17 47 chrX 127218850 127219083 -39431213 - B4A SINE B4 0 292 67 4 1555 3513 200 75 83 chrX 127219085 127219414 -39430882 + RLTR25A LTR ERVK 2 327 -776 4 1555 243 0 0 0 chrX 127219414 127219441 -39430855 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 4 1555 3513 200 75 83 chrX 127219441 127220062 -39430234 + RLTR25A LTR ERVK 328 944 -159 4 1555 1208 62 0 0 chrX 127220111 127220257 -39430039 - B1_Mm SINE Alu 0 147 2 4 1555 882 174 55 132 chrX 127220286 127220597 -39429699 + RLTR25B LTR ERVK 742 1028 0 4 1555 333 291 85 56 chrX 127220655 127220772 -39429524 - L1MC LINE L1 -756 5390 5276 4 1555 987 220 45 5 chrX 127220772 127220973 -39429323 - B3 SINE B2 -5 211 3 4 1555 333 291 85 56 chrX 127220973 127221161 -39429135 - L1MC LINE L1 -871 5275 5076 4 1555 1048 277 168 28 chrX 127221202 127221559 -39428737 + MTD LTR MaLR 13 419 0 4 1555 306 279 119 38 chrX 127221559 127221714 -39428582 - MLT1B LTR MaLR -16 358 191 4 1555 218 267 0 16 chrX 127222026 127222087 -39428209 + GA-rich Low_complexity Low_complexity 3 62 0 4 1555 378 265 163 12 chrX 127222280 127222452 -39427844 - MLT2B4 LTR ERVL -358 198 1 4 1555 200 265 0 0 chrX 127222454 127222503 -39427793 + CT-rich Low_complexity Low_complexity 2 50 0 4 1555 726 260 77 0 chrX 127222522 127222718 -39427578 - B3 SINE B2 -5 211 1 4 1555 361 359 0 18 chrX 127222718 127222888 -39427408 - MLT1B LTR MaLR -214 176 10 4 1555 492 185 9 44 chrX 127222959 127223072 -39427224 - PB1D9 SINE Alu -10 110 2 4 1555 674 190 8 16 chrX 127223202 127223325 -39426971 + B1F SINE Alu 20 141 -8 4 1555 228 343 34 101 chrX 127223203 127223352 -39426944 + B4A SINE B4 106 244 -48 4 1555 320 302 73 141 chrX 127223529 127223669 -39426627 + L1ME3A LINE L1 5572 5691 -482 4 1555 418 243 162 86 chrX 127223669 127223867 -39426429 + B3 SINE B2 4 216 0 4 1555 320 302 73 141 chrX 127223867 127223954 -39426342 + L1ME3A LINE L1 5692 5768 -405 4 1555 2053 140 35 123 chrX 127223954 127224386 -39425910 + ORR1B1 LTR MaLR 1 394 0 4 1555 320 302 73 141 chrX 127224386 127224512 -39425784 + L1ME3A LINE L1 5769 5901 -272 4 1555 607 285 7 0 chrX 127224539 127224676 -39425620 - B1F2 SINE Alu 0 149 12 4 1555 525 281 22 77 chrX 127224676 127224720 -39425576 - ID_B1 SINE B4 0 224 54 4 1555 25 31 0 0 chrX 127224893 127224925 -39425371 + AT_rich Low_complexity Low_complexity 1 32 0 4 1555 733 184 49 21 chrX 127225019 127225163 -39425133 + B1_Mur4 SINE Alu 2 149 -1 4 1555 1957 187 27 27 chrX 127225242 127225611 -39424685 - ORR1D1 LTR MaLR 0 374 6 4 1555 27 0 0 0 chrX 127226255 127226282 -39424014 + AT_rich Low_complexity Low_complexity 1 27 0 4 1555 809 121 21 7 chrX 127226282 127226424 -39423872 - Lx4A LINE L1 -2 7056 6913 4 1555 1375 60 28 0 chrX 127226457 127226639 -39423657 - B2_Mm1t SINE B2 -4 189 3 4 1555 206 32 32 0 chrX 127226894 127226925 -39423371 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 4 1555 252 0 0 0 chrX 127226930 127226958 -39423338 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1555 644 297 120 65 chrX 127227274 127227598 -39422698 - Tigger5 DNA MER2_type -22 344 3 4 1555 312 70 0 0 chrX 127228158 127228201 -39422095 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1555 477 329 48 65 chrX 127228239 127228675 -39421621 + L1MB7 LINE L1 1256 1586 -5410 4 1555 8299 97 17 4 chrX 127228813 127230059 -39420237 + L1_Mm LINE L1 3899 5166 -717 4 1555 3369 77 139 20 chrX 127230059 127230563 -39419733 - LTRIS2 LTR ERV1 0 564 1 4 1555 8299 97 17 4 chrX 127230563 127230583 -39419713 + L1_Mm LINE L1 5167 5182 -701 4 1555 36805 9 0 7 chrX 127230583 127235749 -39414547 + L1Md_A LINE L1 463 5586 -297 4 1555 9045 4 0 0 chrX 127235749 127236745 -39413551 + L1Md_A LINE L1 5587 6582 0 4 1555 13157 74 12 1 chrX 127236745 127236867 -39413429 + L1Md_F2 LINE L1 3716 3837 -2046 4 1555 184 0 30 61 chrX 127236867 127236900 -39413396 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 1555 13157 74 12 1 chrX 127236900 127238628 -39411668 + L1Md_F2 LINE L1 3838 5584 -299 4 1555 7555 62 10 21 chrX 127238628 127239634 -39410662 + L1Md_F2 LINE L1 5587 6581 -1 4 1555 476 320 43 43 chrX 127239893 127240128 -39410168 + L1MB7 LINE L1 4856 5090 -1916 4 1555 551 241 84 102 chrX 127240175 127240401 -39409895 - ORR1E LTR MaLR 0 370 149 4 1555 241 222 0 0 chrX 127240402 127240447 -39409849 + G-rich Low_complexity Low_complexity 6 50 0 4 1555 577 293 54 14 chrX 127240447 127240630 -39409666 - ORR1E LTR MaLR -190 194 18 4 1555 783 279 93 18 chrX 127240900 127241358 -39408938 + L1MB7 LINE L1 6549 7034 0 4 1555 488 273 87 0 chrX 127241445 127241628 -39408668 + Lx8 LINE L1 6598 6796 -677 4 1555 1024 224 10 35 chrX 127241640 127241698 -39408598 + B3 SINE B2 15 72 -144 4 1555 2889 55 0 29 chrX 127241698 127242074 -39408222 - RLTR10B2 LTR ERVK 0 365 1 4 1555 1024 224 10 35 chrX 127242074 127242214 -39408082 + B3 SINE B2 73 208 -8 4 1555 28 0 0 0 chrX 127242271 127242299 -39407997 + AT_rich Low_complexity Low_complexity 1 28 0 4 1555 310 130 202 25 chrX 127242333 127242412 -39407884 + HAL1-3A_ME LINE L1 1940 2032 -826 4 1555 1191 209 99 62 chrX 127242430 127242551 -39407745 - ORR1D2 LTR MaLR 0 370 252 4 1555 1632 133 86 175 chrX 127242551 127243072 -39407224 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1555 1191 209 99 62 chrX 127243072 127243302 -39406994 - ORR1D2 LTR MaLR -119 251 6 4 1555 204 40 0 0 chrX 127243409 127243434 -39406862 + (CCA)n Simple_repeat Simple_repeat 2 26 0 4 1555 258 116 0 0 chrX 127243438 127243481 -39406815 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1555 1112 292 60 48 chrX 127243484 127243837 -39406459 + MER54B LTR ERVL 122 478 -315 4 1555 662 292 5 52 chrX 127243864 127244077 -39406219 + B3 SINE B2 1 203 -13 4 1555 351 0 0 0 chrX 127244130 127244169 -39406127 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 1555 276 176 0 0 chrX 127244580 127244631 -39405665 + MTD LTR MaLR 48 98 -321 4 1555 16391 136 101 19 chrX 127244632 127246355 -39403941 + Lx LINE L1 424 2551 -3332 4 1555 7642 8 0 0 chrX 127246355 127247203 -39403093 + L1Md_T LINE L1 5735 6582 0 4 1555 16391 152 143 18 chrX 127247203 127251009 -39399287 + Lx LINE L1 2552 6647 -7 4 1555 1194 94 0 0 chrX 127251010 127251180 -39399116 + (GAAA)n Simple_repeat Simple_repeat 3 172 0 4 1555 251 245 0 0 chrX 127251180 127251227 -39399069 + MTD LTR MaLR 84 130 -289 4 1555 778 265 196 28 chrX 127251227 127251358 -39398938 + ORR1D1 LTR MaLR 1 166 -218 4 1555 360 0 0 0 chrX 127251358 127251398 -39398898 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 1555 192 40 0 0 chrX 127251399 127251424 -39398872 + (TCC)n Simple_repeat Simple_repeat 2 26 0 4 1555 937 246 6 0 chrX 127251424 127251616 -39398680 + ORR1D1 LTR MaLR 167 374 0 4 1555 3254 270 23 29 chrX 127251687 127251904 -39398392 + RMER1C Other Other 392 605 -737 4 1555 2380 90 16 0 chrX 127251904 127252226 -39398070 + ORR1A2 LTR MaLR 1 327 0 4 1555 3254 270 23 29 chrX 127252226 127252963 -39397333 + RMER1C Other Other 606 1340 -2 4 1555 844 259 33 62 chrX 127253008 127253108 -39397188 + MTD LTR MaLR 196 284 -135 4 1555 1602 27 21 0 chrX 127253108 127253296 -39397000 - B2_Mm1a SINE B2 -1 192 1 4 1555 844 259 33 62 chrX 127253296 127253405 -39396891 + MTD LTR MaLR 285 399 -20 4 1555 614 270 27 48 chrX 127253532 127253811 -39396485 - ORR1D2 LTR MaLR 0 370 1 4 1555 406 338 12 49 chrX 127253811 127253973 -39396323 + ID_B1 SINE B4 37 192 -32 4 1555 1013 276 47 12 chrX 127254042 127254299 -39395997 + ORR1D2 LTR MaLR 4 269 -101 4 1555 1680 179 52 0 chrX 127254300 127254607 -39395689 + MTC LTR MaLR 1 323 -98 4 1555 981 179 0 97 chrX 127254605 127254821 -39395475 + MTC LTR MaLR 219 413 -8 4 1555 603 206 0 0 chrX 127254829 127254936 -39395360 + ORR1D2 LTR MaLR 264 370 0 4 1555 587 284 172 20 chrX 127255064 127256131 -39394165 + L1MB7 LINE L1 4633 5866 -318 4 1555 1295 246 21 19 chrX 127256135 127256443 -39393853 - ORR1C2 LTR MaLR 0 394 77 4 1555 1165 61 172 0 chrX 127256443 127256606 -39393690 - B2_Mm2 SINE B2 -3 192 2 4 1555 1039 260 71 34 chrX 127256606 127256617 -39393679 - ORR1C2 LTR MaLR -318 76 65 4 1555 1585 59 4 35 chrX 127256617 127256846 -39393450 - L1Md_F2 LINE L1 0 6582 6361 4 1555 1039 260 71 34 chrX 127256846 127256879 -39393417 - ORR1C2 LTR MaLR -330 64 30 4 1555 1112 65 6 6 chrX 127256879 127257035 -39393261 + L1_Mus1 LINE L1 6222 6377 -190 4 1555 537 179 32 0 chrX 127257035 127257130 -39393166 - ORR1D1 LTR MaLR -273 101 4 4 1555 1300 288 65 61 chrX 127257148 127257669 -39392627 + RMER5 LTR ERV1 1 523 -11 4 1555 639 232 36 12 chrX 127257878 127258044 -39392252 + RMER5 LTR ERV1 349 518 -16 4 1555 1033 51 73 0 chrX 127258044 127258181 -39392115 + B1_Mus1 SINE Alu 2 148 0 4 1555 366 335 42 17 chrX 127258227 127258464 -39391832 + L1MB7 LINE L1 5915 6157 -22 4 1555 1528 191 218 31 chrX 127258624 127259046 -39391250 + MT2A LTR ERVL 1 514 -19 4 1555 1071 182 46 14 chrX 127259046 127259263 -39391033 + URR1B DNA MER1_type 1 224 -1 4 1555 1528 191 218 31 chrX 127259263 127259289 -39391007 + MT2A LTR ERVL 515 533 0 4 1555 298 273 77 93 chrX 127259317 127259499 -39390797 - B3A SINE B2 -19 179 1 4 1555 988 141 6 6 chrX 127259559 127259737 -39390559 + CT-rich Low_complexity Low_complexity 1 178 0 4 1555 204 40 0 0 chrX 127259737 127259762 -39390534 + (TC)n Simple_repeat Simple_repeat 2 26 0 4 1555 348 288 13 12 chrX 127260476 127260589 -39389707 - PB1D9 SINE Alu -13 137 28 4 1555 358 226 128 38 chrX 127260604 127260737 -39389559 - B1F1 SINE Alu -4 145 1 4 1555 1005 171 15 45 chrX 127260932 127261134 -39389162 + RLTR25A LTR ERVK 396 591 -437 4 1555 195 42 0 0 chrX 127261162 127261186 -39389110 + (TCC)n Simple_repeat Simple_repeat 2 25 0 4 1555 825 79 0 0 chrX 127261216 127261343 -39388953 + (TTCTC)n Simple_repeat Simple_repeat 3 129 0 4 1555 345 197 0 0 chrX 127261343 127261414 -39388882 + CT-rich Low_complexity Low_complexity 1 71 0 4 1555 1096 103 0 0 chrX 127261414 127261559 -39388737 - B1_Mus2 SINE Alu -2 145 1 4 1555 7511 87 5 3 chrX 127261561 127263114 -39387182 - L1_Mus3 LINE L1 0 6638 5080 4 1555 5399 125 0 19 chrX 127263114 127264519 -39385777 - L1VL4 LINE L1 -2148 1411 37 4 1555 2368 144 62 14 chrX 127264534 127264957 -39385339 + RLTR25A LTR ERVK 661 1103 0 4 1555 2242 174 21 0 chrX 127265193 127265579 -39384717 + ORR1B1 LTR MaLR 1 394 0 4 1555 235 302 118 8 chrX 127265672 127265799 -39384497 + MER77 LTR ERVL 459 599 -8 4 1555 231 36 0 0 chrX 127266076 127266104 -39384192 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 4 1555 1170 176 19 5 chrX 127266415 127266621 -39383675 + URR1B DNA MER1_type 2 210 -15 4 1555 1011 217 5 15 chrX 127267342 127267548 -39382748 - MTC LTR MaLR 0 421 218 4 1555 1711 199 10 0 chrX 127267550 127267847 -39382449 - MTD LTR MaLR -119 300 1 5 1555 401 208 0 0 chrX 127268241 127268313 -39381983 + MTD LTR MaLR 1 72 -347 5 1555 2330 154 51 62 chrX 127268314 127268765 -39381531 + RLTR41 LTR ERV1 1 446 0 5 1555 5257 57 1 0 chrX 127268783 127269446 -39380850 - L1Md_F3 LINE L1 -14 6570 5907 5 1555 2818 65 0 0 chrX 127269446 127269817 -39380479 + L1Md_F3 LINE L1 5513 5883 0 5 1555 306 148 37 0 chrX 127269832 127269886 -39380410 - ORR1C2-int LTR MaLR -185 1324 1269 5 1555 291 299 155 65 chrX 127269912 127270080 -39380216 + RMER13B LTR ERVK 579 761 -147 5 194 3659 227 75 26 chrX 127270209 127271092 -39379204 - ORR1C2-int LTR MaLR -442 928 3 5 1556 1412 209 82 33 chrX 127271092 127271458 -39378838 - ORR1C2 LTR MaLR 0 384 1 5 1556 227 310 0 17 chrX 127271458 127271517 -39378779 - MTE2b LTR MaLR -319 60 3 5 1556 604 364 47 11 chrX 127271624 127271902 -39378394 + MamRep605 Unknown Unknown 531 818 -58 5 1556 1229 50 0 0 chrX 127272194 127272354 -39377942 + L1Md_F2 LINE L1 6175 6334 -248 5 1556 696 107 0 0 chrX 127272646 127272749 -39377547 + (GA)n Simple_repeat Simple_repeat 1 103 0 5 1556 740 280 0 28 chrX 127272974 127273187 -39377109 - B3 SINE B2 -9 207 1 5 1556 1303 210 127 18 chrX 127273382 127273712 -39376584 + ORR1D1 LTR MaLR 1 366 -8 5 1556 907 251 164 12 chrX 127273732 127274055 -39376241 + ORR1D1 LTR MaLR 1 372 -2 5 1556 889 263 86 23 chrX 127274105 127274362 -39375934 - MTD LTR MaLR -146 273 1 5 1556 1916 57 4 8 chrX 127275040 127275289 -39375007 - L1Md_F2 LINE L1 -1 6581 6334 5 1556 2152 46 0 0 chrX 127275289 127275560 -39374736 + L1Md_F2 LINE L1 5784 6054 -528 5 1556 7836 84 2 2 chrX 127276665 127277785 -39372511 + L1Md_F2 LINE L1 4469 5588 -295 5 1556 7115 75 26 6 chrX 127277787 127278748 -39371548 + L1Md_F2 LINE L1 5591 6570 -12 5 1556 1566 151 69 91 chrX 127279125 127279475 -39370821 + ORR1C1 LTR MaLR 37 378 0 5 1556 347 218 71 26 chrX 127279612 127279725 -39370571 + Lx8 LINE L1 7354 7471 -2 5 1556 225 0 0 0 chrX 127280859 127280884 -39369412 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 5 1556 839 280 65 26 chrX 127280894 127281125 -39369171 + B4A SINE B4 5 244 -48 5 1556 299 141 14 72 chrX 127281125 127281183 -39369113 - MTE2a LTR MaLR 0 379 326 5 1556 846 190 0 26 chrX 127281183 127281334 -39368962 + B2_Mm2 SINE B2 2 148 -47 5 1556 477 0 0 0 chrX 127281341 127281394 -39368902 + (TAAA)n Simple_repeat Simple_repeat 1 53 0 5 1556 798 237 122 125 chrX 127281415 127281752 -39368544 - MTE2a LTR MaLR -43 336 1 5 1556 270 0 0 0 chrX 127281788 127281818 -39368478 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 1556 186 127 0 83 chrX 127281862 127281922 -39368374 + GA-rich Low_complexity Low_complexity 4 58 0 5 1556 501 228 3 14 chrX 127282781 127282888 -39367408 - B1F SINE Alu 0 117 12 5 1556 384 373 92 41 chrX 127283105 127283323 -39366973 + B4 SINE B4 48 276 -16 5 1556 495 0 0 0 chrX 127283347 127283402 -39366894 + (TC)n Simple_repeat Simple_repeat 1 55 0 5 1556 454 326 7 0 chrX 127283473 127283608 -39366688 - B1_Mur1 SINE Alu -13 136 1 5 1556 381 123 0 0 chrX 127283661 127283726 -39366570 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1556 629 260 164 35 chrX 127283755 127284151 -39366145 + MER113 DNA MER1_type 33 479 -42 5 1556 9322 86 8 16 chrX 127284441 127286322 -39363974 + Lx3_Mus LINE L1 5149 7005 -4 5 1556 2831 70 67 0 chrX 127286351 127286723 -39363573 - L1_Mus1 LINE L1 0 6567 6171 5 1556 922 51 0 0 chrX 127286723 127286840 -39363456 + L1_Mus1 LINE L1 6045 6161 -406 5 1556 1106 290 99 59 chrX 127287423 127287896 -39362400 + MER34A LTR ERV1 76 567 -4 5 1556 233 300 14 41 chrX 127288641 127288714 -39361582 - MIRb SINE MIR -171 97 27 5 1556 324 364 91 29 chrX 127288699 127288870 -39361426 - MIR SINE MIR -90 186 1 5 1556 221 0 35 0 chrX 127289074 127289103 -39361193 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 5 1556 242 56 28 0 chrX 127290080 127290116 -39360180 + (TGG)n Simple_repeat Simple_repeat 1 37 0 5 1556 37268 55 1 23 chrX 127290484 127297158 -39353138 - L1Md_T LINE L1 0 6582 104 5 1556 33 0 0 0 chrX 127297848 127297881 -39352415 + AT_rich Low_complexity Low_complexity 1 33 0 5 1556 509 296 130 20 chrX 127298288 127298581 -39351715 + Tigger13a DNA MER2_type 152 476 -295 5 1556 4269 119 10 50 chrX 127298701 127299405 -39350891 - Lx2 LINE L1 -2 6995 6320 5 1556 216 184 0 0 chrX 127299489 127299538 -39350758 + (CAT)n Simple_repeat Simple_repeat 2 50 0 5 1556 2793 129 47 13 chrX 127300032 127300496 -39349800 - Lx3A LINE L1 0 6981 6502 5 1556 9355 88 48 11 chrX 127300528 127302059 -39348237 - L1VL2 LINE L1 -633 2982 1395 5 1556 1605 45 5 0 chrX 127302054 127302344 -39347952 - L1VL2 LINE L1 -2467 1148 857 5 1556 529 197 34 8 chrX 127302344 127302454 -39347842 + RLTR13C1 LTR ERVK 887 983 0 5 1556 403 196 0 148 chrX 127302456 127302564 -39347732 - L1VL2 LINE L1 -5944 391 300 5 1556 1187 130 79 5 chrX 127302571 127302787 -39347509 - L1VL2 LINE L1 -5937 398 167 5 1556 2447 239 14 22 chrX 127303328 127303881 -39346415 - RMER15 LTR ERVL 0 575 27 5 1556 223 347 28 0 chrX 127304377 127304449 -39345847 - MIRc SINE MIR -124 144 71 5 1556 1890 196 14 9 chrX 127304789 127305139 -39345157 + ORR1B2 LTR MaLR 1 352 -15 5 1556 213 149 45 0 chrX 127305261 127305328 -39344968 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 5 1556 6747 175 45 53 chrX 127305347 127306866 -39343430 + ORR1B2-int LTR MaLR 2 1509 0 5 1556 2111 157 25 8 chrX 127306866 127307219 -39343077 + ORR1B2 LTR MaLR 1 359 -8 5 1556 567 244 81 86 chrX 127307328 127307525 -39342771 - B3A SINE B2 0 198 3 5 1556 920 268 137 30 chrX 127307694 127307994 -39342302 + MTEb LTR MaLR 1 332 -47 5 1556 1162 141 10 10 chrX 127308836 127309030 -39341266 - B2_Mm2 SINE B2 -1 194 1 5 1556 658 266 117 4 chrX 127309232 127309456 -39340840 - RMER20B LTR ERVK -76 440 199 5 1556 500 289 9 44 chrX 127309639 127309804 -39340492 - RMER20B LTR ERVK -358 158 2 5 1556 1248 280 52 64 chrX 127309805 127310158 -39340138 + MTD LTR MaLR 1 363 -56 5 1556 2347 38 24 0 chrX 127310158 127310448 -39339848 + L1Md_F3 LINE L1 6274 6570 -14 5 1556 1248 280 52 64 chrX 127310448 127310514 -39339782 + MTD LTR MaLR 364 415 -4 5 1556 259 313 72 0 chrX 127311753 127311836 -39338460 + BC1_Mm scRNA scRNA 6 94 -58 5 1556 242 395 84 0 chrX 127312982 127313101 -39337195 + LTR88a LTR Gypsy 11 139 -677 5 1556 189 0 0 0 chrX 127313112 127313133 -39337163 + (GGGA)n Simple_repeat Simple_repeat 1 21 0 5 1556 4662 127 13 24 chrX 127313310 127314768 -39335528 + L1Md_F2 LINE L1 208 1650 -4233 5 1556 9634 62 0 4 chrX 127314783 127316077 -39334219 + L1Md_F3 LINE L1 4298 5586 -297 5 1556 8174 33 4 10 chrX 127316077 127317066 -39333230 + L1Md_F3 LINE L1 5587 6569 -15 5 1556 23840 78 121 5 chrX 127317066 127318803 -39331493 + L1Md_F2 LINE L1 1638 3378 -2505 5 1556 750 75 0 95 chrX 127318803 127318950 -39331346 - L1Md_F2 LINE L1 0 6582 6450 5 1556 23840 78 121 5 chrX 127318950 127318982 -39331314 + L1Md_F2 LINE L1 3379 3846 -2037 5 1556 4447 40 6 0 chrX 127318982 127319514 -39330782 + L1Md_T LINE L1 6047 6581 -1 5 1556 23840 75 80 4 chrX 127319514 127322140 -39328156 + L1Md_F2 LINE L1 3847 6473 -109 5 1556 988 124 6 6 chrX 127322329 127322499 -39327797 + (TCTCCC)n Simple_repeat Simple_repeat 6 175 0 5 1556 553 282 0 8 chrX 127322533 127322665 -39327631 - B1_Mur1 SINE Alu -16 133 3 5 1556 684 350 52 25 chrX 127322778 127323103 -39327193 + MLT1D LTR MaLR 3 336 -169 5 1556 416 317 72 57 chrX 127323108 127323273 -39327023 - MLT1D LTR MaLR 0 505 335 5 1556 698 34 0 11 chrX 127323273 127323363 -39326933 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 5 1556 416 317 72 57 chrX 127323363 127323391 -39326905 - MLT1D LTR MaLR -171 334 309 5 1556 706 272 68 47 chrX 127323671 127324115 -39326181 + L1MA6 LINE L1 4751 5203 -940 5 1556 1249 254 39 84 chrX 127324121 127324504 -39325792 - MTE2a LTR MaLR -2 377 12 5 1556 1387 288 43 47 chrX 127324514 127325245 -39325051 + L1MA6 LINE L1 5202 5940 -360 5 1556 792 236 99 0 chrX 127325245 127325436 -39324860 + B3 SINE B2 1 210 -6 5 1556 1387 295 49 58 chrX 127325436 127325624 -39324672 + L1MA6 LINE L1 5941 6120 -180 5 1556 1853 132 124 12 chrX 127325683 127326006 -39324290 - ORR1B2 LTR MaLR -8 359 1 5 1556 4362 194 65 13 chrX 127326006 127326139 -39324157 - ORR1B2-int LTR MaLR 0 1509 1369 5 1556 212 59 29 0 chrX 127326139 127326173 -39324123 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1556 1062 58 0 41 chrX 127326173 127326318 -39323978 - B1_Mus1 SINE Alu -9 139 1 5 1556 4362 194 65 13 chrX 127326318 127327119 -39323177 - ORR1B2-int LTR MaLR -141 1368 526 5 1556 3655 125 23 25 chrX 127327119 127327773 -39322523 - RMER17D LTR ERVK -2 887 235 5 1556 31551 52 1 2 chrX 127327774 127332634 -39317662 - L1Md_F2 LINE L1 -28 6554 1696 5 1556 1855 100 11 39 chrX 127332634 127332915 -39317381 - RMER17D LTR ERVK -616 273 1 5 1556 2794 190 17 4 chrX 127332915 127333438 -39316858 - ORR1B2-int LTR MaLR -977 532 3 5 1556 1772 199 89 0 chrX 127333441 127333802 -39316494 - ORR1B2 LTR MaLR -1 393 1 5 1556 1237 234 147 9 chrX 127333802 127334136 -39316160 - MTD LTR MaLR -38 381 1 5 1556 313 282 56 8 chrX 127334136 127334261 -39316035 + L1MA6 LINE L1 6112 6242 -58 5 1556 41161 5 0 0 chrX 127334324 127340697 -39309599 - L1Md_A LINE L1 0 6582 208 5 1556 198 0 0 0 chrX 127341558 127341580 -39308716 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1556 793 283 5 22 chrX 127341580 127341764 -39308532 + MTD LTR MaLR 114 294 -125 5 1556 223 132 0 54 chrX 127341808 127341864 -39308432 + CT-rich Low_complexity Low_complexity 3 55 0 5 1556 297 275 128 0 chrX 127341887 127341996 -39308300 - B1_Mur1 SINE Alu -20 129 7 5 1556 1855 267 67 18 chrX 127341996 127342501 -39307795 - RMER15 LTR ERVL 0 575 46 5 1556 1862 176 100 26 chrX 127342501 127342631 -39307665 + MTC LTR MaLR 3 142 -279 5 1556 1525 154 124 42 chrX 127342631 127342822 -39307474 - RMER17C LTR ERVK 0 410 220 5 1556 468 35 0 0 chrX 127342822 127342880 -39307416 + (GA)n Simple_repeat Simple_repeat 1 58 0 5 1556 1525 154 124 42 chrX 127342880 127343067 -39307229 - RMER17C LTR ERVK -191 219 1 5 1556 1862 176 100 26 chrX 127343067 127343326 -39306970 + MTC LTR MaLR 143 421 0 5 1556 28 0 0 0 chrX 127343446 127343474 -39306822 + AT_rich Low_complexity Low_complexity 1 28 0 5 1556 3736 146 75 24 chrX 127343814 127344530 -39305766 - RMER6A LTR ERVK -3 753 1 5 1556 223 283 132 0 chrX 127344589 127344642 -39305654 - B4A SINE B4 -145 147 88 5 1556 594 41 0 0 chrX 127344807 127344880 -39305416 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 5 1556 1040 74 0 0 chrX 127344880 127345015 -39305281 - B1_Mus1 SINE Alu -13 135 1 5 1556 648 276 33 51 chrX 127345067 127345281 -39305015 - B3 SINE B2 -6 210 1 5 1556 1384 122 0 35 chrX 127345797 127346026 -39304270 - Lx2 LINE L1 0 6997 6777 5 1556 6654 127 32 5 chrX 127346027 127347278 -39303018 - Lx2 LINE L1 -353 6644 5358 5 1556 300 250 157 23 chrX 127347282 127347454 -39302842 - L1MC4 LINE L1 -151 7891 7697 5 1556 466 380 6 6 chrX 127347811 127347970 -39302326 - RSINE1 SINE B4 -6 159 1 5 1556 333 335 113 21 chrX 127347977 127348215 -39302081 - L1MC4 LINE L1 -664 7378 7119 5 1556 1935 197 65 16 chrX 127348285 127348672 -39301624 - MTD LTR MaLR -13 406 1 5 1556 378 0 0 0 chrX 127349772 127349814 -39300482 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 5 1556 2278 209 25 23 chrX 127349895 127350374 -39299922 - Lx9 LINE L1 -473 7171 6692 5 1556 1824 188 114 17 chrX 127350354 127350775 -39299521 + Lx9 LINE L1 7175 7636 -8 5 1556 182 333 47 47 chrX 127351012 127351097 -39299199 - MIR3 SINE MIR -34 174 90 6 1556 1676 196 93 6 chrX 127351496 127351840 -39298456 + ORR1D1 LTR MaLR 1 374 0 6 1556 381 75 0 0 chrX 127353151 127353204 -39297092 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1556 207 186 0 0 chrX 127353645 127353687 -39296609 - MIRc SINE MIR -105 157 118 6 1556 357 117 0 0 chrX 127353935 127353995 -39296301 + (TG)n Simple_repeat Simple_repeat 2 61 0 6 1556 361 99 24 36 chrX 127353995 127354079 -39296217 + GA-rich Low_complexity Low_complexity 4 86 0 6 1556 275 366 61 8 chrX 127354117 127354249 -39296047 - MLT1A1 LTR MaLR -269 139 1 6 1556 361 346 142 22 chrX 127354278 127354553 -39295743 - L2 LINE L2 -1144 2275 1968 6 1556 1717 191 37 22 chrX 127355390 127355850 -39294446 - L1MEf LINE L1 -4089 2111 1645 6 1556 180 341 126 56 chrX 127355878 127356235 -39294061 - L2 LINE L2 -1217 2202 1821 6 1556 1556 259 23 0 chrX 127356824 127357167 -39293129 + ORR1D2 LTR MaLR 20 370 0 6 1556 214 339 65 0 chrX 127357246 127357308 -39292988 + MIR SINE MIR 33 98 -164 6 1556 286 327 18 27 chrX 127357495 127357605 -39292691 - MamRep605 Unknown Unknown -362 514 406 6 1556 366 307 0 0 chrX 127357841 127357929 -39292367 - L3 LINE CR1 -3 4486 4399 6 1556 201 39 0 0 chrX 127358680 127358706 -39291590 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 1556 25 31 0 0 chrX 127358902 127358934 -39291362 + AT_rich Low_complexity Low_complexity 1 32 0 6 1556 611 231 25 0 chrX 127358941 127359062 -39291234 + RSINE1 SINE B4 1 124 -41 6 1556 594 39 0 0 chrX 127359063 127359140 -39291156 + (CA)n Simple_repeat Simple_repeat 1 77 0 6 1556 1380 201 58 9 chrX 127359470 127359812 -39290484 + Lx9 LINE L1 7284 7642 -2 6 1556 800 352 17 21 chrX 127359924 127360211 -39290085 + Tigger7 DNA MER2_type 22 307 -2184 6 1556 360 0 0 0 chrX 127360213 127360253 -39290043 + (TAA)n Simple_repeat Simple_repeat 1 40 0 6 1556 333 319 11 0 chrX 127360321 127360415 -39289881 + Tigger7 DNA MER2_type 2397 2491 0 6 1556 441 0 0 0 chrX 127360501 127360550 -39289746 + (TA)n Simple_repeat Simple_repeat 1 49 0 6 1556 1751 229 23 28 chrX 127360559 127360867 -39289429 - ORR1B1 LTR MaLR 0 394 88 6 1556 3026 64 13 5 chrX 127360867 127361260 -39289036 - MTA_Mm LTR MaLR 0 396 1 6 1556 1751 229 23 28 chrX 127361260 127361347 -39288949 - ORR1B1 LTR MaLR -307 87 1 6 1556 1186 257 87 12 chrX 127361435 127361781 -39288515 + ORR1D1 LTR MaLR 1 372 -2 6 1556 269 31 0 0 chrX 127362046 127362078 -39288218 + L1Md_F2 LINE L1 5443 5474 -409 6 1556 8353 34 0 2 chrX 127362094 127363083 -39287213 + L1Md_F2 LINE L1 5588 6574 -8 6 1556 853 237 0 17 chrX 127363090 127363262 -39287034 + B3 SINE B2 48 216 0 6 1556 296 373 91 37 chrX 127365314 127365556 -39284740 - L2c LINE L2 -5 3382 3128 6 1556 348 24 0 0 chrX 127365654 127365695 -39284601 + (TC)n Simple_repeat Simple_repeat 1 41 0 6 1556 184 368 0 0 chrX 127365716 127365773 -39284523 + L2a LINE L2 3104 3160 -266 6 1556 257 367 182 34 chrX 127365905 127366443 -39283853 + L2 LINE L2 2355 2972 -447 6 1556 560 294 132 29 chrX 127366541 127366821 -39283475 - MLT1A0 LTR MaLR -3 362 54 6 1556 3057 108 3 113 chrX 127367609 127368192 -39282104 + MURVY-LTR LTR ERV1 1 519 0 6 1556 1134 205 14 9 chrX 127369398 127369619 -39280677 - URR1B DNA MER1_type -3 222 1 6 1556 378 0 0 0 chrX 127369674 127369716 -39280580 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 6 1556 321 161 0 0 chrX 127371687 127371743 -39278553 + L1M5 LINE L1 5765 5820 -304 6 1556 1728 286 49 44 chrX 127371931 127372687 -39277609 + Lx9 LINE L1 6715 7473 0 6 1556 232 217 43 0 chrX 127373519 127373565 -39276731 - MIRm SINE MIR -5 271 224 6 1556 238 381 69 80 chrX 127374775 127374956 -39275340 - L2 LINE L2 -420 2999 2817 6 1556 1356 208 174 14 chrX 127374956 127375317 -39274979 + MTD LTR MaLR 1 419 0 6 1556 238 381 69 80 chrX 127375317 127375671 -39274625 - L2 LINE L2 -603 2816 2470 6 1556 313 317 8 47 chrX 127375780 127375909 -39274387 - MIR SINE MIR 0 262 139 6 1556 641 260 65 177 chrX 127376350 127376565 -39273731 - B3A SINE B2 0 195 5 6 1556 365 326 71 0 chrX 127376887 127376985 -39273311 + RSINE1 SINE B4 2 106 -59 6 1556 225 0 0 0 chrX 127378577 127378602 -39271694 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 6 1556 511 291 58 15 chrX 127379396 127379602 -39270694 - Lx7 LINE L1 -1848 5848 5634 6 1556 1968 238 62 24 chrX 127379645 127380197 -39270099 + Lx8 LINE L1 6897 7469 -4 6 1556 23 78 0 0 chrX 127380760 127380811 -39269485 + AT_rich Low_complexity Low_complexity 1 51 0 6 1556 302 321 63 119 chrX 127381632 127381918 -39268378 - MLT1M LTR MaLR -320 352 83 6 1556 188 279 16 32 chrX 127383020 127383083 -39267213 + MIRc SINE MIR 82 143 -125 6 1556 543 320 47 23 chrX 127383506 127383848 -39266448 + MER63D DNA AcHobo 181 530 -531 6 1556 28714 67 1 4 chrX 127384870 127391040 -39259256 - L1Md_F2 LINE L1 -1 6584 333 6 1556 1119 69 7 0 chrX 127391164 127391309 -39258987 + B1_Mm SINE Alu 2 147 0 6 1556 235 200 368 23 chrX 127391370 127391457 -39258839 + B1_Mur2 SINE Alu 26 142 -7 6 1556 24 32 0 0 chrX 127392417 127392448 -39257848 + AT_rich Low_complexity Low_complexity 1 31 0 6 1556 210 364 44 35 chrX 127392691 127392805 -39257491 - L2b LINE L2 -10 3365 3251 6 1556 632 290 222 4 chrX 127394042 127394281 -39256015 + B4A SINE B4 1 291 -1 6 1556 471 285 39 0 chrX 127394711 127394841 -39255455 - B1F SINE Alu 0 149 15 6 1556 2305 51 100 49 chrX 127396507 127396836 -39253460 + ORR1A1 LTR MaLR 1 346 0 6 1556 277 325 0 24 chrX 127396989 127397071 -39253225 + ID2 SINE ID 4 83 0 6 1556 476 93 13 0 chrX 127397423 127397498 -39252798 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 6 1556 466 363 50 19 chrX 127397607 127397767 -39252529 + RSINE1 SINE B4 1 165 0 6 1556 1799 277 103 6 chrX 127398151 127398443 -39251853 + MER82 DNA MER2_type 68 383 -270 6 1556 360 0 0 0 chrX 127398443 127398483 -39251813 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1556 1799 277 103 6 chrX 127398483 127398723 -39251573 + MER82 DNA MER2_type 384 652 -1 6 1556 21 0 0 0 chrX 127400084 127400105 -39250191 + AT_rich Low_complexity Low_complexity 1 21 0 6 1556 511 272 41 0 chrX 127400762 127400909 -39249387 - MIR SINE MIR -10 252 100 6 1556 409 290 27 36 chrX 127400910 127401021 -39249275 + PB1D10 SINE Alu 7 116 -1 6 1556 3117 73 2 0 chrX 127401286 127401681 -39248615 - MTA_Mm LTR MaLR 0 396 1 6 1556 427 324 84 19 chrX 127401682 127401876 -39248420 + B3A SINE B2 17 215 -1 6 1557 7714 54 2 2 chrX 127402926 127403895 -39246401 + L1Md_F2 LINE L1 5611 6579 -3 6 1557 189 353 99 64 chrX 127403926 127404243 -39246053 - L2b LINE L2 -69 3318 3004 6 1557 3152 73 2 0 chrX 127404792 127405202 -39245094 + L1_Mus1 LINE L1 6157 6567 0 6 1557 288 301 52 0 chrX 127405266 127405402 -39244894 - L1MA4 LINE L1 -370 5930 5788 6 1557 440 348 91 22 chrX 127405417 127405649 -39244647 - LTR16E1 LTR ERVL -268 270 23 6 1557 192 143 0 0 chrX 127405747 127405789 -39244507 + (T)n Simple_repeat Simple_repeat 1 42 0 6 1557 1928 203 70 5 chrX 127405920 127406306 -39243990 - MTC LTR MaLR -10 411 1 6 1557 197 33 0 32 chrX 127406824 127406855 -39243441 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 6 1557 180 0 0 0 chrX 127409423 127409443 -39240853 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 6 1557 274 284 0 22 chrX 127410725 127410815 -39239481 + MTEb LTR MaLR 268 355 -24 6 1557 50 0 0 0 chrX 127411295 127411345 -39238951 + AT_rich Low_complexity Low_complexity 1 50 0 6 1557 240 260 46 61 chrX 127411384 127411515 -39238781 - MER97b DNA MER1_type? -323 730 602 6 1557 369 346 29 43 chrX 127411550 127411689 -39238607 + RSINE1 SINE B4 16 152 -13 6 1557 675 37 0 0 chrX 127411695 127411777 -39238519 + (TCCC)n Simple_repeat Simple_repeat 3 84 0 6 1557 183 80 0 0 chrX 127411779 127411804 -39238492 + (TCTCTG)n Simple_repeat Simple_repeat 2 26 0 6 1557 370 213 135 171 chrX 127412205 127412375 -39237921 - RSINE1 SINE B4 0 165 2 6 1557 523 284 88 0 chrX 127412551 127412597 -39237699 + MER20 DNA MER1_type 58 115 -104 6 1557 378 0 0 0 chrX 127412597 127412639 -39237657 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1557 523 284 88 0 chrX 127412639 127412740 -39237556 + MER20 DNA MER1_type 116 217 -2 6 1557 473 371 11 23 chrX 127412748 127412922 -39237374 - MER97b DNA MER1_type? -856 197 26 6 1557 580 294 0 7 chrX 127413679 127413816 -39236480 - RSINE1 SINE B4 -29 136 1 6 1557 336 333 187 28 chrX 127413878 127414196 -39236100 + MLT1K LTR MaLR 131 499 -96 6 1557 23 0 0 0 chrX 127414436 127414459 -39235837 + AT_rich Low_complexity Low_complexity 1 23 0 6 1557 859 282 0 5 chrX 127414464 127414671 -39235625 - B3 SINE B2 -2 214 9 6 1557 180 270 96 53 chrX 127414744 127414838 -39235458 + MIRm SINE MIR 163 260 -16 6 1557 692 220 82 12 chrX 127415052 127415222 -39235074 + MER3 DNA MER1_type 18 199 -10 6 1557 180 97 0 0 chrX 127415492 127415523 -39234773 + (T)n Simple_repeat Simple_repeat 1 31 0 6 1557 603 243 87 36 chrX 127415752 127415941 -39234355 + B3 SINE B2 1 200 -16 6 1557 246 128 0 0 chrX 127415941 127415980 -39234316 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 1557 213 356 147 7 chrX 127416659 127416809 -39233487 - L2 LINE L2 -567 2852 2682 6 1557 686 305 90 5 chrX 127416825 127417026 -39233270 - ID_B1 SINE B4 -6 218 1 6 1557 18256 169 9 127 chrX 127417421 127419199 -39231097 + L1VL4 LINE L1 609 2353 -3530 6 1557 1082 108 0 0 chrX 127419199 127419347 -39230949 + B1_Mus1 SINE Alu 1 148 0 6 1557 18256 157 10 186 chrX 127419347 127420693 -39229603 + L1VL4 LINE L1 2354 3265 -2618 6 1557 3615 72 34 8 chrX 127420693 127421198 -39229098 + L1Md_F2 LINE L1 6064 6581 -1 6 1557 18256 157 10 186 chrX 127421198 127421411 -39228885 + L1VL4 LINE L1 3266 3476 -2407 6 1557 222 62 0 0 chrX 127421411 127421443 -39228853 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 7 1557 18256 157 10 186 chrX 127421443 127424025 -39226271 + L1VL4 LINE L1 3477 5572 -311 6 1557 566 126 45 45 chrX 127424027 127424160 -39226136 + L1_Mus4 LINE L1 6497 6629 -7 7 1557 631 257 44 16 chrX 127424453 127424635 -39225661 + B3A SINE B2 3 189 -9 7 1557 483 18 0 0 chrX 127427730 127427786 -39222510 + (TTA)n Simple_repeat Simple_repeat 2 57 0 7 1557 192 77 0 0 chrX 127428019 127428045 -39222251 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 7 1557 251 272 9 28 chrX 127428153 127428259 -39222037 + (TATATG)n Simple_repeat Simple_repeat 1 104 0 7 1557 261 321 41 88 chrX 127428269 127428416 -39221880 - B4 SINE B4 -62 230 91 7 1557 645 38 0 0 chrX 127428424 127428504 -39221792 + (TC)n Simple_repeat Simple_repeat 1 80 0 7 1557 635 255 14 14 chrX 127428506 127428649 -39221647 - B1_Mur1 SINE Alu -5 144 2 7 1557 477 332 12 96 chrX 127428649 127428745 -39221551 - ID_B1 SINE B4 -4 219 1 7 1557 1814 78 54 32 chrX 127428967 127429244 -39221052 + L1_Mus2 LINE L1 6272 6554 -12 7 1557 4505 52 0 0 chrX 127429244 127429803 -39220493 + L1Md_F2 LINE L1 5028 5586 -297 7 1557 8249 34 3 8 chrX 127429804 127430791 -39219505 + L1Md_F2 LINE L1 5588 6569 -13 7 1557 765 0 0 0 chrX 127431143 127431228 -39219068 + (TTC)n Simple_repeat Simple_repeat 3 87 0 7 1557 3530 143 49 48 chrX 127431233 127431692 -39218604 - Lx LINE L1 -7 6647 6174 7 1557 285 118 0 0 chrX 127431692 127431743 -39218553 + (CAGA)n Simple_repeat Simple_repeat 4 54 0 7 1557 3530 143 49 48 chrX 127431743 127431763 -39218533 - Lx LINE L1 -481 6173 6169 7 1557 465 50 0 0 chrX 127431763 127431823 -39218473 + (CA)n Simple_repeat Simple_repeat 1 60 0 7 1557 3530 143 49 48 chrX 127431823 127432030 -39218266 - Lx LINE L1 -486 6168 5959 7 1557 9028 151 62 32 chrX 127432030 127432489 -39217807 - RLTR22_Mur LTR ERVK -38 1810 1341 7 1557 489 124 0 0 chrX 127432489 127432586 -39217710 + (CA)n Simple_repeat Simple_repeat 2 98 0 7 1557 9028 151 62 32 chrX 127432586 127433883 -39216413 - RLTR22_Mur LTR ERVK -508 1340 3 7 1557 209 145 0 52 chrX 127434249 127434307 -39215989 + A-rich Low_complexity Low_complexity 1 55 0 7 1557 1053 220 5 9 chrX 127435529 127435740 -39214556 - B3 SINE B2 -2 214 5 7 1557 1314 294 99 67 chrX 127435988 127436328 -39213968 + Lx9 LINE L1 4849 5226 -654 7 1557 1026 214 13 18 chrX 127436328 127436552 -39213744 - URR1B DNA MER1_type -1 224 2 7 1557 1314 292 86 58 chrX 127436552 127437245 -39213051 + Lx9 LINE L1 5227 5920 -1724 7 1557 1068 206 0 10 chrX 127437554 127437750 -39212546 + MTC LTR MaLR 228 421 0 7 1557 2062 217 34 16 chrX 127437763 127438208 -39212088 + ORR1D1-int LTR MaLR 918 1370 0 7 1557 1303 236 95 9 chrX 127438208 127438545 -39211751 + ORR1D1 LTR MaLR 1 366 -8 7 1557 577 266 95 77 chrX 127438684 127439149 -39211147 - L1MEf LINE L1 -360 5819 5347 7 1557 337 317 0 0 chrX 127439486 127439590 -39210706 - L1MA5 LINE L1 -426 5874 5771 7 1557 358 328 120 23 chrX 127439592 127439892 -39210404 - L1MEf LINE L1 -1120 5026 4698 7 1557 417 325 18 35 chrX 127439897 127440223 -39210073 - L1MEf LINE L1 -3308 2838 2514 7 1557 266 322 0 9 chrX 127440241 127440357 -39209939 - L1MEf LINE L1 -3715 2431 2317 7 1557 267 114 0 0 chrX 127440384 127440428 -39209868 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1557 639 98 0 0 chrX 127440428 127440520 -39209776 + (TA)n Simple_repeat Simple_repeat 2 93 0 7 1557 356 307 44 49 chrX 127440527 127440914 -39209382 - L1MEf LINE L1 -3991 2251 1867 7 1557 245 226 122 137 chrX 127441193 127441455 -39208841 - RMER10A LTR ERVL -61 381 124 7 1557 24 32 0 0 chrX 127442873 127442904 -39207392 + AT_rich Low_complexity Low_complexity 1 31 0 7 1557 497 316 27 43 chrX 127444072 127444257 -39206039 - B3A SINE B2 -16 182 1 7 1557 1510 222 55 3 chrX 127445673 127446038 -39204258 + ORR1C2 LTR MaLR 1 384 0 7 1557 2000 134 0 57 chrX 127446441 127446790 -39203506 + ORR1A4 LTR MaLR 1 329 0 7 1557 2462 250 78 44 chrX 127447456 127448325 -39201971 - RMER1B Other Other -16 1050 2 7 1557 2066 128 3 65 chrX 127448325 127448676 -39201620 - ORR1A4 LTR MaLR 0 329 1 7 1557 1458 246 67 92 chrX 127448676 127449008 -39201288 - RMER1B Other Other -678 388 44 7 1557 315 319 60 11 chrX 127450867 127451051 -39199245 - MER52-int LTR ERV1 -5273 1818 1626 7 1557 22224 76 16 7 chrX 127451231 127454816 -39195480 + L1Md_F3 LINE L1 715 4331 -1552 7 1557 8110 42 5 1 chrX 127454813 127456212 -39194084 + L1Md_F3 LINE L1 5149 6553 -31 7 1557 407 19 19 0 chrX 127456212 127456264 -39194032 + (TA)n Simple_repeat Simple_repeat 1 53 0 7 1557 4418 91 2 13 chrX 127456265 127456899 -39193397 + L1Md_F2 LINE L1 5954 6580 -2 7 1557 366 335 74 52 chrX 127458284 127458525 -39191771 + MurERV4-int LTR ERVK 2778 2986 -2274 7 1557 819 279 122 9 chrX 127458525 127458698 -39191598 - ORR1D1 LTR MaLR 0 374 181 7 1557 585 0 0 0 chrX 127458698 127458763 -39191533 + (GA)n Simple_repeat Simple_repeat 1 65 0 7 1557 819 279 122 9 chrX 127458763 127458925 -39191371 - ORR1D1 LTR MaLR -194 180 1 7 1557 366 330 79 59 chrX 127458925 127459371 -39190925 + MurERV4-int LTR ERVK 2987 3447 -1813 7 1557 288 288 99 56 chrX 127460319 127460713 -39189583 + IAPLTR3-int LTR ERVK 4640 5081 -1740 7 1557 643 238 15 15 chrX 127463404 127463536 -39186760 - B1_Mur2 SINE Alu -8 141 10 7 1557 21 0 0 0 chrX 127463822 127463843 -39186453 + AT_rich Low_complexity Low_complexity 1 21 0 7 1557 23 33 0 0 chrX 127464017 127464047 -39186249 + AT_rich Low_complexity Low_complexity 1 30 0 7 1557 285 292 154 0 chrX 127464240 127464370 -39185926 + MER3 DNA MER1_type 13 162 -47 7 1557 26 30 0 0 chrX 127464554 127464587 -39185709 + AT_rich Low_complexity Low_complexity 1 33 0 7 1557 1990 199 8 25 chrX 127464858 127465223 -39185073 - ORR1B2 LTR MaLR -8 359 1 7 1557 509 259 88 51 chrX 127465247 127465500 -39184796 + LTR48 LTR ERV1 5 314 -473 7 1557 363 252 106 14 chrX 127465618 127465759 -39184537 + LTR48 LTR ERV1 576 729 -58 7 1557 246 125 0 0 chrX 127467572 127467620 -39182676 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1557 1340 209 80 44 chrX 127468163 127468524 -39181772 + ORR1D1 LTR MaLR 1 374 0 7 1557 26 0 0 0 chrX 127468979 127469005 -39181291 + AT_rich Low_complexity Low_complexity 1 26 0 7 1557 276 326 84 0 chrX 127469017 127469112 -39181184 - L2a LINE L2 -20 3406 3304 7 1557 841 301 84 7 chrX 127469175 127469449 -39180847 - MER2 DNA MER2_type -26 319 25 7 1557 715 237 6 13 chrX 127469942 127470100 -39180196 - MTE2b LTR MaLR 0 379 223 7 1557 1013 251 109 3 chrX 127470123 127470407 -39179889 - ORR1D2 LTR MaLR -56 314 1 7 1557 593 221 0 24 chrX 127470410 127470535 -39179761 + B1_Mur2 SINE Alu 7 128 -21 7 1557 306 296 51 0 chrX 127470550 127470648 -39179648 - MTE2b LTR MaLR -154 225 123 7 1557 1558 26 0 0 chrX 127470712 127470901 -39179395 - L1_Mm LINE L1 -1401 4482 4294 7 1557 419 46 0 15 chrX 127470901 127470967 -39179329 + L1Md_F3 LINE L1 6508 6572 -12 7 1557 1910 165 9 0 chrX 127471069 127471385 -39178911 + ORR1A2 LTR MaLR 1 319 -8 7 1557 579 122 0 0 chrX 127471693 127471783 -39178513 + (GA)n Simple_repeat Simple_repeat 2 91 0 7 1557 276 311 19 19 chrX 127472046 127472154 -39178142 + ID_B1 SINE B4 87 194 -30 7 1557 187 301 67 27 chrX 127473107 127473182 -39177114 - MIRb SINE MIR -15 253 176 7 1557 1019 292 7 34 chrX 127473223 127473492 -39176804 + MTE2a LTR MaLR 3 264 -115 7 1557 183 129 0 0 chrX 127473516 127473547 -39176749 + (A)n Simple_repeat Simple_repeat 1 31 0 7 1557 240 221 29 14 chrX 127473873 127473942 -39176354 - L2 LINE L2 -832 2587 2518 7 1557 608 233 55 30 chrX 127474083 127474247 -39176049 - B2_Mm2 SINE B2 -1 194 27 7 1557 2285 78 9 12 chrX 127474256 127474579 -39175717 - L1_Mus1 LINE L1 -13 6554 6233 7 1557 831 184 5 55 chrX 127474586 127474787 -39175509 + Lx7 LINE L1 7506 7696 0 7 1557 529 363 163 25 chrX 127474824 127475395 -39174901 - L1MEe LINE L1 -2822 3324 2656 7 1557 1641 217 173 9 chrX 127475395 127475823 -39174473 - RLTR19 LTR ERVK 0 499 2 7 1557 529 363 163 25 chrX 127475823 127475938 -39174358 - L1MEe LINE L1 -3491 2655 2543 7 1557 1475 31 20 20 chrX 127476220 127476418 -39173878 - L1Md_F3 LINE L1 0 6584 6387 7 1557 232 67 0 0 chrX 127476418 127476448 -39173848 + L1Md_A LINE L1 5967 5996 -586 7 1557 388 293 42 17 chrX 127476453 127476571 -39173725 - RSINE1 SINE B4 -36 129 9 7 1557 257 264 96 0 chrX 127476571 127476696 -39173600 - L1MEe LINE L1 -3948 2218 2082 7 1557 22 0 0 0 chrX 127476740 127476762 -39173534 + AT_rich Low_complexity Low_complexity 1 22 0 7 1557 416 280 56 8 chrX 127477087 127477213 -39173083 + MER117 DNA MER1_type 49 180 -17 7 1557 228 300 86 12 chrX 127479611 127479692 -39170604 + MIR3 SINE MIR 69 155 -53 7 1557 276 351 31 33 chrX 127480123 127480338 -39169958 + MIRb SINE MIR 32 251 -17 7 1557 586 323 5 5 chrX 127480750 127480940 -39169356 + MIR SINE MIR 45 234 -28 7 1557 363 220 31 71 chrX 127481263 127481390 -39168906 - L1MA10 LINE L1 -10 6324 6203 7 1557 1920 272 52 42 chrX 127481393 127481988 -39168308 + Lx8 LINE L1 6302 6902 -571 7 1557 275 288 0 12 chrX 127484264 127484345 -39165951 - ID2 SINE ID -3 80 1 7 1557 1321 253 10 94 chrX 127485213 127485650 -39164646 - RMER19C LTR ERVK 0 611 142 7 1557 802 257 91 16 chrX 127485649 127485902 -39164394 - RMER19C LTR ERVK -332 279 8 7 1557 265 374 121 19 chrX 127486186 127486401 -39163895 + MIRb SINE MIR 21 257 -11 7 1557 432 118 0 0 chrX 127487870 127487938 -39162358 + (TG)n Simple_repeat Simple_repeat 2 69 0 7 1557 3071 16 9 109 chrX 127488117 127488548 -39161748 + RLTR10 LTR ERVK 1 388 -2 7 1557 12935 27 8 1 chrX 127488560 127490418 -39159878 + RLTR10-int LTR ERVK 41 1984 -3 7 1557 3043 18 9 109 chrX 127490420 127490851 -39159445 + RLTR10 LTR ERVK 1 388 -2 7 1557 2189 31 4 0 chrX 127490863 127491123 -39159173 + RLTR10-int LTR ERVK 41 301 -1686 7 1557 270 176 0 0 chrX 127493071 127493122 -39157174 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 7 1557 12333 118 6 2 chrX 127493886 127495797 -39154499 + L1_Mm LINE L1 1949 3867 -2016 7 1557 7353 103 8 6 chrX 127495800 127496863 -39153433 + L1_Mm LINE L1 4808 5872 -11 7 1557 3501 84 2 2 chrX 127496864 127497340 -39152956 + L1_Mus1 LINE L1 6090 6565 -2 7 1557 231 36 0 0 chrX 127497386 127497414 -39152882 + (A)n Simple_repeat Simple_repeat 1 28 0 7 1557 794 237 51 5 chrX 127497481 127497676 -39152620 + B3 SINE B2 1 204 -12 7 1557 273 337 26 106 chrX 127499411 127499525 -39150771 - B1F1 SINE Alu -5 115 11 7 1557 324 291 54 0 chrX 127499642 127499790 -39150506 - L1MA4 LINE L1 -370 5930 5775 7 1557 241 0 0 0 chrX 127499964 127500000 -39150296 - L1_Mus2 LINE L1 0 6566 6531 7 1557 1069 115 0 0 chrX 127500000 127500156 -39150140 - L1_Mus1 LINE L1 -36 6531 6376 1 1557 5060 72 38 4 chrX 127500151 127500859 -39149437 - L1_Mus1 LINE L1 -300 6267 5570 1 1557 32132 104 38 8 chrX 127500859 127505733 -39144563 + RMER16-int LTR ERVK 387 5406 0 2 1557 2314 106 6 0 chrX 127505733 127506063 -39144233 + RMER16 LTR ERVK 1 332 -201 2 1557 2139 155 128 2 chrX 127506063 127506491 -39143805 - RMER17B LTR ERVK 0 958 477 3 1557 426 176 0 0 chrX 127506480 127506554 -39143742 - 4.5SRNA scRNA scRNA -18 76 3 4 1557 612 172 34 17 chrX 127506534 127506652 -39143644 - RLTR26 LTR ERVK -522 120 1 5 1557 868 74 8 8 chrX 127506652 127506774 -39143522 + RMER16 LTR ERVK 327 448 -85 6 1557 26 0 0 0 chrX 127506774 127506800 -39143496 + AT_rich Low_complexity Low_complexity 1 26 0 7 1557 312 276 41 31 chrX 127506907 127507004 -39143292 - MIRb SINE MIR -108 160 63 8 1557 261 319 116 55 chrX 127508170 127508369 -39141927 - LFSINE_Vert SINE SINE -3 456 246 9 1557 3685 45 34 0 chrX 127510468 127510934 -39139362 + RLTR45 LTR ERVK 1 482 0 1 1557 4756 68 2 8 chrX 127511272 127511892 -39138404 - L1_Mus1 LINE L1 -1 6566 5951 1 1557 5941 105 1 51 chrX 127511894 127512215 -39138081 + L1_Mus1 LINE L1 4983 5299 -584 1 1557 1131 75 0 7 chrX 127512215 127512363 -39137933 + B1_Mm SINE Alu 1 147 0 1 1557 5941 84 1 32 chrX 127512363 127513056 -39137240 + L1_Mus1 LINE L1 5300 5945 -622 1 1557 4019 173 62 1 chrX 127513258 127514281 -39136015 - Lx5 LINE L1 -509 6491 5350 1 1557 7918 62 20 6 chrX 127514330 127515661 -39134635 - L1Md_F2 LINE L1 0 6582 5212 1 1557 3010 219 36 0 chrX 127515660 127516239 -39134057 + Lx5 LINE L1 6414 7013 -37 1 1557 2309 87 48 0 chrX 127516388 127516700 -39133596 - ORR1A2 LTR MaLR 0 327 1 1 1557 22 0 0 0 chrX 127517316 127517338 -39132958 + AT_rich Low_complexity Low_complexity 1 22 0 1 1557 528 16 0 0 chrX 127518373 127518434 -39131862 + (TC)n Simple_repeat Simple_repeat 1 61 0 1 1557 1688 216 179 28 chrX 127518589 127519364 -39130932 + RMER6C LTR ERVK 1 718 -38 2 1557 21 36 0 0 chrX 127520348 127520376 -39129920 + AT_rich Low_complexity Low_complexity 1 28 0 2 1557 221 301 12 35 chrX 127521147 127521233 -39129063 - L3 LINE CR1 -110 4379 4296 2 1557 318 329 50 56 chrX 127521246 127521407 -39128889 - MIRb SINE MIR -36 232 73 2 1557 1801 156 3 13 chrX 127521692 127522003 -39128293 + RLTR10E LTR ERVK 1 308 -3 2 1557 187 300 39 20 chrX 127522082 127522133 -39128163 + L2a LINE L2 3345 3396 -30 2 1557 21 36 0 0 chrX 127522140 127522168 -39128128 + AT_rich Low_complexity Low_complexity 1 28 0 2 1557 255 93 0 0 chrX 127522357 127522400 -39127896 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 1557 1103 62 7 7 chrX 127522407 127522554 -39127742 - B1_Mus1 SINE Alu 0 148 2 2 1557 272 359 115 14 chrX 127522567 127522776 -39127520 - L3 LINE CR1 -580 3909 3680 2 1557 453 335 91 12 chrX 127522882 127523136 -39127160 - B4A SINE B4 -14 278 5 2 1557 434 355 44 26 chrX 127523237 127523463 -39126833 - L3 LINE CR1 -909 3580 3351 2 1557 318 324 86 41 chrX 127526138 127526710 -39123586 - L1M4 LINE L1 -857 5289 4674 3 1557 223 274 123 0 chrX 127526758 127526831 -39123465 + ID4_ SINE ID 2 83 0 3 1557 227 321 59 45 chrX 127527048 127527250 -39123046 - L1MA5A LINE L1 -127 6170 5966 3 1557 1051 101 0 0 chrX 127527268 127527416 -39122880 - B1_Mus1 SINE Alu 0 148 1 3 1557 8417 37 0 0 chrX 127527538 127528531 -39121765 + L1Md_F2 LINE L1 5587 6579 -3 3 1557 225 158 0 50 chrX 127528909 127528969 -39121327 + T-rich Low_complexity Low_complexity 4 60 0 3 1557 1141 88 0 0 chrX 127528971 127529118 -39121178 - B1_Mus1 SINE Alu -1 147 1 3 1557 423 0 0 0 chrX 127529510 127529557 -39120739 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 1557 452 273 6 96 chrX 127529774 127529952 -39120344 - RSINE1 SINE B4 0 165 4 3 1557 287 297 47 3 chrX 127530458 127530667 -39119629 - L1MDa LINE L1 -4503 2130 1891 3 1557 9762 95 13 10 chrX 127530665 127532900 -39117396 - L1VL2 LINE L1 -1174 2441 200 4 1558 204 250 14 14 chrX 127533272 127533341 -39116955 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 4 1558 497 316 26 19 chrX 127533633 127533788 -39116508 - B3 SINE B2 -4 212 57 4 1558 5464 215 48 29 chrX 127533807 127535160 -39115136 - Lx5 LINE L1 -1 7049 5672 4 1558 659 313 84 60 chrX 127535551 127535918 -39114378 - RMER13A LTR ERVK -481 379 4 4 1558 14360 165 36 50 chrX 127535923 127536404 -39113892 - L1_Mur2 LINE L1 -172 5705 5281 4 1558 2316 93 31 0 chrX 127536404 127536727 -39113569 - L1_Mus3 LINE L1 -6 6632 6300 4 1558 14360 165 36 50 chrX 127536727 127536977 -39113319 - L1_Mur2 LINE L1 -597 5280 5050 4 1558 4222 141 71 3 chrX 127536977 127537667 -39112629 - RMER19A LTR ERVK 0 737 1 4 1558 14360 165 36 50 chrX 127537667 127539939 -39110357 - L1_Mur2 LINE L1 -828 5049 2744 4 1558 2222 185 7 11 chrX 127539928 127540393 -39109903 + L1_Mur2 LINE L1 1549 2011 -3866 4 1558 418 338 55 0 chrX 127541125 127541200 -39109096 + B4 SINE B4 3 77 -215 4 1558 228 67 0 0 chrX 127541200 127541230 -39109066 + (TTG)n Simple_repeat Simple_repeat 2 31 0 5 1558 418 338 55 0 chrX 127541230 127541299 -39108997 + B4 SINE B4 78 154 -138 4 1558 640 309 39 0 chrX 127541740 127541947 -39108349 + Lx8 LINE L1 6818 7032 -441 5 1558 393 287 113 76 chrX 127541950 127542252 -39108044 + Lx8 LINE L1 7151 7463 -10 5 1558 745 256 177 70 chrX 127542307 127542635 -39107661 + ORR1D1 LTR MaLR 1 363 -11 5 1558 549 224 32 0 chrX 127542637 127542762 -39107534 + ORR1D1-int LTR MaLR 215 343 -1027 5 1558 510 61 0 0 chrX 127542776 127542842 -39107454 + (TTCC)n Simple_repeat Simple_repeat 3 68 0 5 1558 522 0 0 0 chrX 127542902 127542960 -39107336 + (TTTC)n Simple_repeat Simple_repeat 1 58 0 5 1558 21129 173 22 66 chrX 127542960 127545713 -39104583 + Lx LINE L1 1086 3857 -2029 5 1558 351 0 0 0 chrX 127545713 127545752 -39104544 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1558 21129 158 24 48 chrX 127545752 127545831 -39104465 + Lx LINE L1 3858 3937 -2717 5 1558 2247 44 30 20 chrX 127545831 127546135 -39104161 - IAPLTR2b LTR ERVK -20 307 1 5 1558 21129 158 24 48 chrX 127546135 127548794 -39101502 + Lx LINE L1 3938 6654 0 5 1558 558 108 0 0 chrX 127549876 127549959 -39100337 + (TA)n Simple_repeat Simple_repeat 2 84 0 5 1558 486 96 0 0 chrX 127550332 127550405 -39099891 + (TG)n Simple_repeat Simple_repeat 1 73 0 5 1558 243 0 0 0 chrX 127550518 127550545 -39099751 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1558 22 35 0 0 chrX 127550687 127550716 -39099580 + AT_rich Low_complexity Low_complexity 1 29 0 6 1558 285 29 0 0 chrX 127552729 127552763 -39097533 + (TTA)n Simple_repeat Simple_repeat 3 36 0 6 1558 1213 179 9 9 chrX 127554153 127554379 -39095917 - URR1A DNA MER1_type 0 226 1 6 1558 639 232 41 27 chrX 127554650 127554796 -39095500 + B1_Mur1 SINE Alu 2 149 0 6 1558 3876 45 19 0 chrX 127555527 127555993 -39094303 - MT2C_Mm LTR ERVL 0 475 1 6 1558 572 345 40 23 chrX 127556357 127556752 -39093544 - MER20B DNA MER1_type -58 725 324 6 1558 28 29 0 0 chrX 127556752 127556787 -39093509 + AT_rich Low_complexity Low_complexity 1 35 0 6 1558 459 318 61 55 chrX 127556975 127557082 -39093214 - L2a LINE L2 -4 3422 3313 6 1558 682 11 23 0 chrX 127557082 127557169 -39093127 + (CAAAA)n Simple_repeat Simple_repeat 2 90 0 6 1558 459 318 61 55 chrX 127557169 127557354 -39092942 - L2a LINE L2 -114 3312 3128 6 1558 242 321 100 111 chrX 127557426 127557712 -39092584 - L2a LINE L2 -473 2946 2641 6 1558 207 0 0 0 chrX 127557712 127557735 -39092561 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1558 242 321 100 111 chrX 127557735 127557752 -39092544 - L2a LINE L2 -779 2640 2633 6 1558 626 265 37 37 chrX 127557752 127557913 -39092383 - RSINE1 SINE B4 -1 164 4 7 1558 242 321 100 111 chrX 127557913 127558060 -39092236 - L2a LINE L2 -787 2632 2500 6 1558 1335 215 100 3 chrX 127558060 127558400 -39091896 - ORR1D1 LTR MaLR -1 373 1 7 1558 264 395 32 0 chrX 127558451 127558575 -39091721 - MER20B DNA MER1_type -625 158 31 6 1558 609 14 0 0 chrX 127560684 127560754 -39089542 + (TC)n Simple_repeat Simple_repeat 2 71 0 7 1558 653 269 107 40 chrX 127560764 127561139 -39089157 - L1MA4 LINE L1 -383 5917 5518 7 1558 2215 199 44 35 chrX 127561648 127562168 -39088128 + RMER6D LTR ERVK 1 525 -195 7 1558 206 349 14 43 chrX 127562662 127562800 -39087496 - L4 LINE RTE -104 1925 1792 7 1558 6116 138 24 16 chrX 127563086 127564139 -39086157 - Lx2 LINE L1 0 6997 5937 7 1558 312 319 113 51 chrX 127564720 127565090 -39085206 + MER113 DNA MER1_type 50 442 -79 7 1558 6120 87 12 3 chrX 127565090 127565981 -39084315 - MusHAL1 LINE L1 -316 2396 1498 7 1558 7196 114 25 1 chrX 127565978 127567387 -39082909 + L1_Mus4 LINE L1 5194 6628 -8 8 1558 396 0 0 0 chrX 127567481 127567525 -39082771 + (TA)n Simple_repeat Simple_repeat 2 45 0 8 1558 2692 46 0 9 chrX 127568119 127568467 -39081829 - L1Md_F2 LINE L1 -1 6581 6237 8 1558 315 49 0 0 chrX 127569560 127569601 -39080695 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1558 399 225 24 48 chrX 127569709 127569793 -39080503 - B1_Mur4 SINE Alu -65 85 4 8 1558 180 0 0 0 chrX 127571913 127571933 -39078363 + (TG)n Simple_repeat Simple_repeat 1 20 0 8 1558 821 38 9 0 chrX 127571933 127572037 -39078259 + (GA)n Simple_repeat Simple_repeat 1 106 0 8 1558 522 204 11 11 chrX 127572051 127572145 -39078151 - B1_Mur2 SINE Alu -44 105 12 8 1558 297 0 0 0 chrX 127572693 127572726 -39077570 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 8 1558 1390 280 30 54 chrX 127574661 127575291 -39075005 + L1MB7 LINE L1 4413 5027 -1119 8 1558 298 385 6 57 chrX 127575311 127575435 -39074861 + MER58A DNA MER1_type 6 126 -98 9 1558 1968 154 8 19 chrX 127575435 127575798 -39074498 + RLTR15 LTR ERVK 1 359 0 9 1558 298 385 6 57 chrX 127575798 127575849 -39074447 + MER58A DNA MER1_type 127 172 -52 9 1558 255 324 95 7 chrX 127576128 127576265 -39074031 + L1MB7 LINE L1 5402 5550 -624 8 1558 322 256 61 24 chrX 127576278 127576442 -39073854 + L1MB7 LINE L1 5624 5793 -385 8 1558 368 178 8 33 chrX 127576457 127576551 -39073745 + CT-rich Low_complexity Low_complexity 29 119 0 9 1558 1118 117 6 0 chrX 127576551 127576730 -39073566 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 9 1558 368 178 8 33 chrX 127576730 127576757 -39073539 + polypyrimidine Low_complexity Low_complexity 2 28 0 9 1558 451 233 23 9 chrX 127576760 127576870 -39073426 - B1_Mur1 SINE Alu 0 149 5 9 1558 247 302 38 6 chrX 127576879 127577039 -39073257 - L1MA5 LINE L1 -2 6298 6134 9 1558 240 333 78 39 chrX 127577128 127577281 -39073015 + RSINE1 SINE B4 3 161 -4 9 1558 750 283 46 23 chrX 127577354 127577661 -39072635 + L1MB7 LINE L1 5860 6173 -11 8 1558 272 48 24 0 chrX 127577897 127577939 -39072357 + (TA)n Simple_repeat Simple_repeat 2 44 0 9 1558 337 341 68 10 chrX 127577990 127578283 -39072013 + L1ME3 LINE L1 5615 5924 -238 9 1558 702 233 35 40 chrX 127578308 127578517 -39071779 + B3A SINE B2 8 196 -2 1 1558 210 288 51 0 chrX 127578850 127578909 -39071387 - B3 SINE B2 -147 69 8 1 1558 185 214 24 0 chrX 127579339 127579381 -39070915 + MER5B DNA MER1_type 13 55 -123 1 1558 544 223 0 20 chrX 127580844 127580995 -39069301 + CT-rich Low_complexity Low_complexity 2 149 0 1 1558 12035 162 30 50 chrX 127582463 127584401 -39065895 + L1Md_F LINE L1 222 3793 -2093 1 1558 258 32 0 0 chrX 127584401 127584432 -39065864 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1558 13266 87 2 11 chrX 127584432 127586429 -39063867 + L1Md_F LINE L1 3791 5589 -297 1 1558 7509 63 17 2 chrX 127586429 127587409 -39062887 + L1Md_F2 LINE L1 5587 6581 -1 1 1558 23 0 0 0 chrX 127587503 127587526 -39062770 + AT_rich Low_complexity Low_complexity 1 23 0 1 1558 433 270 9 35 chrX 127587690 127587805 -39062491 + B1_Mur1 SINE Alu 32 143 -6 1 1558 666 0 0 0 chrX 127588603 127588677 -39061619 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 1558 1481 225 112 33 chrX 127588791 127589182 -39061114 + RLTR41 LTR ERV1 1 422 -24 1 1558 634 367 60 3 chrX 127589219 127589536 -39060760 - Lx8 LINE L1 -158 7315 6981 1 1558 309 205 34 57 chrX 127589763 127589851 -39060445 - HAL1-3A_ME LINE L1 -798 2060 1975 1 1558 646 370 25 14 chrX 127589863 127590145 -39060151 - B4A SINE B4 0 292 8 1 1558 440 264 62 27 chrX 127590404 127590579 -39059717 - L1MEf LINE L1 -657 5672 5495 1 1558 845 278 43 5 chrX 127590623 127590833 -39059463 + RMER1A Other Other 198 415 -615 1 1558 3841 181 25 9 chrX 127590838 127591513 -39058783 + RMER1A Other Other 341 1026 -4 1 1558 423 278 8 25 chrX 127591589 127591707 -39058589 - B1F SINE Alu 0 149 34 1 1558 498 103 0 10 chrX 127591712 127591810 -39058486 + Lx3_Mus LINE L1 6904 7000 -9 1 1558 872 72 12 50 chrX 127591810 127591971 -39058325 + (GAAAA)n Simple_repeat Simple_repeat 2 156 0 1 1558 3159 250 53 85 chrX 127591971 127592554 -39057742 - RMER1C Other Other -227 1115 501 1 1558 1922 125 69 0 chrX 127592554 127592859 -39057437 + ORR1A3 LTR MaLR 1 326 0 1 1558 3159 258 55 86 chrX 127592859 127593479 -39056817 - RMER1C Other Other -158 908 131 1 1558 1514 291 60 18 chrX 127593680 127594459 -39055837 - L1MEf LINE L1 -1152 5167 4350 1 1558 380 149 27 0 chrX 127594535 127594609 -39055687 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 1 1558 186 43 0 0 chrX 127594690 127594713 -39055583 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1 1558 335 274 111 74 chrX 127594719 127595090 -39055206 - L1MEf LINE L1 -2223 4096 3708 1 1558 192 111 0 0 chrX 127595223 127595259 -39055037 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1558 790 281 66 12 chrX 127595456 127595697 -39054599 - B4A SINE B4 -36 256 3 1 1558 811 201 7 0 chrX 127595717 127595856 -39054440 + B1_Mur4 SINE Alu 9 148 -2 1 1558 776 295 93 0 chrX 127596034 127596271 -39054025 - ORR1D2 LTR MaLR -111 259 1 1 1558 588 14 0 0 chrX 127596296 127596365 -39053931 + (TC)n Simple_repeat Simple_repeat 2 70 0 1 1558 486 0 0 0 chrX 127596365 127596418 -39053878 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1558 279 246 148 31 chrX 127596643 127596899 -39053397 - L1MEf LINE L1 -4821 1579 1294 1 1558 496 345 74 49 chrX 127596942 127597372 -39052924 - L1MEf LINE L1 -5125 1290 850 1 1558 447 19 0 0 chrX 127598014 127598066 -39052230 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1558 822 332 17 38 chrX 127598073 127598361 -39051935 - MTE2a LTR MaLR -59 320 39 1 1558 821 186 163 0 chrX 127598391 127598563 -39051733 + B3 SINE B2 3 202 -14 1 1558 23 0 0 0 chrX 127598563 127598586 -39051710 + AT_rich Low_complexity Low_complexity 1 23 0 1 1558 460 341 102 11 chrX 127599096 127599549 -39050747 - L1MC4 LINE L1 -418 7624 7131 1 1558 568 274 115 21 chrX 127599753 127600040 -39050256 - L1ME2z LINE L1 -385 6059 5746 1 1558 511 355 116 52 chrX 127600069 127600551 -39049745 + MLT1F2 LTR MaLR 46 558 -2 1 1558 438 322 7 0 chrX 127600566 127600709 -39049587 - B1F SINE Alu -5 144 1 1 1558 255 355 73 45 chrX 127601014 127601259 -39049037 - Ricksha_c DNA MuDR -1363 685 434 1 1558 396 264 73 70 chrX 127601341 127601614 -39048682 - L1ME2z LINE L1 -894 5550 5277 1 1558 2235 193 42 2 chrX 127601659 127602110 -39048186 - Lx3C LINE L1 -3 6973 6505 1 1558 409 95 48 0 chrX 127602110 127602173 -39048123 - Lx4B LINE L1 -1183 5875 5810 1 1558 1663 167 14 14 chrX 127602162 127602442 -39047854 - Lx2 LINE L1 -117 6880 6601 1 1558 277 219 27 14 chrX 127602458 127602532 -39047764 + L1MA6 LINE L1 6157 6231 -69 1 1558 822 278 36 13 chrX 127602695 127602998 -39047298 - L1ME2z LINE L1 -1254 4892 4583 1 1558 768 224 6 0 chrX 127603253 127603414 -39046882 - Lx6 LINE L1 -11 7449 7288 1 1558 429 127 0 0 chrX 127603418 127603481 -39046815 - B2_Mm2 SINE B2 -95 100 38 1 1558 2931 115 13 7 chrX 127603481 127603936 -39046360 + Lx3A LINE L1 6517 6974 -7 1 1558 3053 99 11 22 chrX 127603941 127604396 -39045900 + Lx LINE L1 6205 6654 0 1 1558 504 215 0 8 chrX 127604659 127604781 -39045515 - Lx7 LINE L1 -198 7498 7378 1 1558 459 165 0 0 chrX 127604783 127604868 -39045428 + (TA)n Simple_repeat Simple_repeat 2 86 0 1 1558 872 219 16 57 chrX 127604869 127605063 -39045233 - Lx6 LINE L1 -356 7104 6919 1 1558 180 0 0 0 chrX 127605407 127605427 -39044869 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1558 213 39 0 0 chrX 127605456 127605482 -39044814 + (TATG)n Simple_repeat Simple_repeat 1 26 0 1 1558 393 22 0 0 chrX 127605482 127605527 -39044769 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 1558 306 0 0 0 chrX 127605937 127605971 -39044325 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1 1558 841 246 30 5 chrX 127605974 127606174 -39044122 - B3 SINE B2 -9 207 3 1 1558 595 55 0 0 chrX 127606194 127606267 -39044029 + L1Md_F2 LINE L1 5514 5586 -297 1 1558 7975 53 0 9 chrX 127606267 127607269 -39043027 + L1Md_F2 LINE L1 5587 6579 -3 1 1558 623 188 73 29 chrX 127607392 127607529 -39042767 - B1_Mur1 SINE Alu -6 143 1 1 1558 839 141 74 0 chrX 127607857 127607992 -39042304 + B1_Mus2 SINE Alu 3 147 0 1 1558 227 305 12 24 chrX 127608025 127608109 -39042187 + ID_B1 SINE B4 64 146 -78 1 1558 314 177 0 162 chrX 127608128 127608202 -39042094 + B2_Mm2 SINE B2 2 63 -132 1 1558 287 210 16 0 chrX 127608200 127608262 -39042034 + B3 SINE B2 154 216 0 1 1558 202 194 0 0 chrX 127608273 127608309 -39041987 + GA-rich Low_complexity Low_complexity 3 38 0 1 1558 401 211 0 26 chrX 127608353 127608431 -39041865 - Lx7 LINE L1 -694 7002 6927 1 1558 2269 120 3 0 chrX 127608742 127609068 -39041228 + ORR1A2 LTR MaLR 1 327 0 1 1558 1219 54 0 0 chrX 127609754 127609901 -39040395 + B1_Mus2 SINE Alu 1 147 0 1 1558 186 43 0 0 chrX 127609902 127609925 -39040371 + (GAA)n Simple_repeat Simple_repeat 2 24 0 1 1558 270 0 0 0 chrX 127610507 127610537 -39039759 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 1558 180 97 0 0 chrX 127611096 127611127 -39039169 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 1 1558 1897 189 58 30 chrX 127611127 127611543 -39038753 - Lx5 LINE L1 -14 7036 6568 1 1558 313 279 162 0 chrX 127611560 127611714 -39038582 + L1M5 LINE L1 5088 5266 -880 1 1558 826 164 203 0 chrX 127611734 127611911 -39038385 - B3 SINE B2 0 216 4 1 1558 240 289 66 0 chrX 127612122 127612198 -39038098 + B1F2 SINE Alu 14 94 -55 1 1558 203 231 19 37 chrX 127612202 127612256 -39038040 + GA-rich Low_complexity Low_complexity 4 56 0 1 1558 286 302 80 13 chrX 127612324 127612475 -39037821 + L1M5 LINE L1 5550 5710 -530 1 1558 1711 223 85 8 chrX 127612607 127612996 -39037300 + MTD LTR MaLR 1 419 0 1 1558 261 255 50 30 chrX 127613447 127613548 -39036748 - MLT1A1 LTR MaLR -1 407 305 1 1558 1248 249 72 9 chrX 127613646 127613994 -39036302 + ORR1D2 LTR MaLR 1 370 0 1 1558 772 247 28 22 chrX 127614125 127614303 -39035993 + B4 SINE B4 12 190 -102 1 1558 213 39 0 0 chrX 127614441 127614467 -39035829 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1558 222 105 0 0 chrX 127616843 127616881 -39033415 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1558 366 244 0 55 chrX 127616893 127616984 -39033312 - B3A SINE B2 -108 90 5 1 1558 243 0 0 0 chrX 127617560 127617587 -39032709 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1558 1017 106 35 0 chrX 127617590 127617732 -39032564 - B1_Mus1 SINE Alu 0 148 2 1 1558 1025 82 0 0 chrX 127618051 127618186 -39032110 - B1_Mus1 SINE Alu -9 139 5 1 1558 600 212 53 0 chrX 127618191 127618304 -39031992 - B3A SINE B2 -78 120 2 1 1558 554 69 40 0 chrX 127618779 127618880 -39031416 + (CA)n Simple_repeat Simple_repeat 1 105 0 1 1558 1529 206 54 11 chrX 127619064 127619417 -39030879 - ORR1D2 LTR MaLR -2 368 1 1 1558 261 0 0 0 chrX 127620073 127620102 -39030194 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1 1558 375 62 49 24 chrX 127620343 127620425 -39029871 + (TA)n Simple_repeat Simple_repeat 2 85 0 1 1558 25 0 0 0 chrX 127620486 127620511 -39029785 + AT_rich Low_complexity Low_complexity 1 25 0 1 1558 237 390 0 12 chrX 127621178 127621261 -39029035 + ID SINE ID 2 83 -141 1 1558 24 32 0 0 chrX 127621325 127621356 -39028940 + AT_rich Low_complexity Low_complexity 1 31 0 1 1558 230 360 78 23 chrX 127623267 127623395 -39026901 - L2 LINE L2 -1102 2317 2183 1 1558 796 271 83 96 chrX 127623588 127623972 -39026324 - MTE2b LTR MaLR 0 379 1 1 1558 3975 184 54 1 chrX 127624231 127624959 -39025337 + MERVL_2A-int LTR ERVL 1405 2170 -3591 1 1558 465 362 107 20 chrX 127625074 127625421 -39024875 - L2 LINE L2 -1878 1541 1165 1 1558 265 297 64 6 chrX 127625527 127625683 -39024613 - L1M6 LINE L1 -4978 1518 1354 1 1558 1039 130 377 0 chrX 127625914 127626145 -39024151 + ORR1A3 LTR MaLR 1 318 -8 1 1558 222 278 97 0 chrX 127626254 127626326 -39023970 - PB1D9 SINE Alu -15 105 27 1 1558 757 336 68 4 chrX 127626956 127627207 -39023089 + B4A SINE B4 3 269 -23 1 1558 1097 82 0 6 chrX 127627259 127627418 -39022878 + (TCTCCC)n Simple_repeat Simple_repeat 5 162 0 1 1558 1035 256 27 3 chrX 127628398 127628696 -39021600 + L1MB1 LINE L1 5818 6122 -46 1 1558 11009 136 11 1 chrX 127628699 127631327 -39018969 - L1_Mus4 LINE L1 0 6636 3980 1 1558 774 124 0 0 chrX 127632422 127632543 -39017753 + (TCC)n Simple_repeat Simple_repeat 3 123 0 2 1558 204 380 56 78 chrX 127633937 127634168 -39016128 - MIRb SINE MIR -14 254 29 2 1558 3409 152 100 46 chrX 127635581 127636298 -39013998 + RMER6A LTR ERVK 1 756 0 2 1558 300 175 12 36 chrX 127636656 127636739 -39013557 - Lx3C LINE L1 -2 6974 6894 2 1558 1246 103 5 21 chrX 127636739 127636927 -39013369 + MT2C_Mm LTR ERVL 291 475 0 2 1558 5616 170 71 8 chrX 127636937 127638424 -39011872 - Lx3C LINE L1 -107 6869 5273 2 1558 6660 142 13 16 chrX 127638422 127639594 -39010702 + Lx3C LINE L1 4095 5262 -615 2 1558 721 294 132 24 chrX 127641367 127641626 -39008670 + Lx8 LINE L1 7051 7327 -146 2 1558 527 54 0 26 chrX 127641626 127641702 -39008594 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 2 1558 721 294 132 24 chrX 127641702 127641822 -39008474 + Lx8 LINE L1 7328 7470 -3 2 1558 321 89 0 0 chrX 127643207 127643252 -39007044 + (TTTTC)n Simple_repeat Simple_repeat 2 46 0 2 1558 22 0 0 0 chrX 127644114 127644136 -39006160 + AT_rich Low_complexity Low_complexity 1 22 0 2 1558 696 312 24 64 chrX 127645445 127645674 -39004622 - B4A SINE B4 -20 272 52 2 1558 1744 215 146 95 chrX 127645674 127646255 -39004041 - RMER19C LTR ERVK 0 611 1 2 1558 696 312 24 64 chrX 127646255 127646275 -39004021 - B4A SINE B4 -241 51 33 2 1558 1242 282 45 6 chrX 127646926 127647279 -39003017 - ORR1D2 LTR MaLR -3 367 1 2 1558 214 279 0 32 chrX 127647532 127647547 -39002749 + T-rich Low_complexity Low_complexity 47 61 0 2 1558 995 59 7 0 chrX 127647547 127647682 -39002614 + (TTCC)n Simple_repeat Simple_repeat 4 139 0 2 1558 214 279 0 32 chrX 127647682 127647729 -39002567 + T-rich Low_complexity Low_complexity 1 46 0 2 1558 21 0 0 0 chrX 127650313 127650334 -38999962 + AT_rich Low_complexity Low_complexity 1 21 0 2 1558 233 330 41 82 chrX 127652445 127652567 -38997729 - B1F1 SINE Alu 0 149 33 2 1558 440 294 0 0 chrX 127652575 127652684 -38997612 - PB1D10 SINE Alu -8 109 1 2 1558 750 316 0 5 chrX 127652869 127653079 -38997217 + Lx8 LINE L1 6392 6600 -873 2 1558 846 227 31 24 chrX 127653103 127653347 -38996949 - MTC LTR MaLR 0 421 98 2 1558 1074 80 0 0 chrX 127653396 127653533 -38996763 + B1_Mus1 SINE Alu 2 138 -10 2 1558 968 0 9 0 chrX 127653533 127653645 -38996651 + (GAA)n Simple_repeat Simple_repeat 2 114 0 2 1558 2038 197 22 3 chrX 127653659 127654021 -38996275 + ORR1B1 LTR MaLR 26 394 0 2 1558 544 297 53 13 chrX 127654012 127654162 -38996134 + B3 SINE B2 4 159 -57 2 1558 15084 165 164 34 chrX 127654261 127659595 -38990701 - Lx LINE L1 -8 6646 565 2 1558 539 53 13 0 chrX 127659624 127659699 -38990597 + (GGAAA)n Simple_repeat Simple_repeat 3 78 0 2 1558 572 160 20 10 chrX 127659715 127659816 -38990480 - MTC LTR MaLR -299 120 19 2 1558 586 251 97 6 chrX 127659892 127660068 -38990228 + Lx8 LINE L1 6729 6920 -553 2 1558 825 87 0 0 chrX 127660249 127660364 -38989932 + (TA)n Simple_repeat Simple_repeat 2 116 0 2 1558 363 342 388 12 chrX 127660492 127660751 -38989545 + MLT1A0 LTR MaLR 1 356 -52 2 1558 249 323 83 31 chrX 127660727 127660823 -38989473 - LTR33 LTR ERVL -318 197 97 2 1558 541 361 129 34 chrX 127661435 127661900 -38988396 - MLT1H1 LTR MaLR -2 553 45 2 1558 715 366 27 43 chrX 127661917 127662362 -38987934 - L2 LINE L2 -492 2927 2490 2 1558 366 336 15 23 chrX 127662584 127662715 -38987581 - MIR SINE MIR -128 134 5 2 1558 1069 179 57 0 chrX 127663049 127663278 -38987018 + L1Md_A LINE L1 258 499 -6225 2 1558 1663 262 188 11 chrX 127663374 127663971 -38986325 + RMER1A Other Other 15 694 -336 2 194 2438 111 9 52 chrX 127663962 127664381 -38985915 - L1_Mm LINE L1 -2066 3817 3417 2 1559 1329 190 29 48 chrX 127664383 127664693 -38985603 + RMER1B Other Other 761 1064 -2 2 1559 325 329 0 13 chrX 127664831 127664985 -38985311 - L1M4 LINE L1 -1202 4944 4793 2 1559 353 369 25 0 chrX 127665036 127665158 -38985138 - RSINE1 SINE B4 0 165 41 2 1559 1780 251 91 4 chrX 127665207 127665668 -38984628 + Lx6 LINE L1 6949 7449 -11 2 1559 558 314 114 36 chrX 127665687 127665763 -38984533 - L1M4 LINE L1 -1927 4219 4113 2 1559 225 65 0 0 chrX 127665763 127665794 -38984502 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1559 558 314 114 36 chrX 127665794 127666490 -38983806 - L1M4 LINE L1 -2034 4112 3387 2 1559 363 337 11 0 chrX 127666502 127666594 -38983702 - B3 SINE B2 -93 123 31 2 1559 23 68 0 0 chrX 127666608 127666652 -38983644 + AT_rich Low_complexity Low_complexity 1 44 0 2 1559 1423 241 103 5 chrX 127666669 127667049 -38983247 + MTD LTR MaLR 3 419 0 2 1559 3961 70 62 8 chrX 127667227 127667758 -38982538 + LTRIS2 LTR ERV1 5 564 0 2 1559 26 0 0 0 chrX 127667796 127667822 -38982474 + AT_rich Low_complexity Low_complexity 1 26 0 2 1559 603 0 0 0 chrX 127668566 127668633 -38981663 + (TTTC)n Simple_repeat Simple_repeat 1 67 0 2 1559 501 265 1 52 chrX 127668635 127668766 -38981530 - B1_Mur1 SINE Alu -12 137 13 2 1559 257 167 9 56 chrX 127668811 127668919 -38981377 + (TA)n Simple_repeat Simple_repeat 2 104 0 2 1559 437 313 79 20 chrX 127669273 127669527 -38980769 + L1ME4a LINE L1 5620 5888 -236 2 1559 186 71 0 0 chrX 127669607 127669635 -38980661 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 2 1559 14404 99 9 2 chrX 127669637 127672428 -38977868 - L1_Mus1 LINE L1 -8 6559 3758 2 1559 9601 133 28 4 chrX 127672424 127674883 -38975413 - L1_Mus1 LINE L1 -3200 2683 163 2 1559 239 304 42 42 chrX 127675040 127675112 -38975184 - ID4_ SINE ID -11 72 1 2 1559 21 0 0 0 chrX 127675907 127675928 -38974368 + AT_rich Low_complexity Low_complexity 1 21 0 2 1559 462 317 26 41 chrX 127676632 127676826 -38973470 - Lx8 LINE L1 -470 7003 6813 2 1559 389 223 14 65 chrX 127676792 127676931 -38973365 + L1_Rod LINE L1 4238 4369 -1511 2 1559 481 273 165 18 chrX 127677093 127677390 -38972906 + L1_Rod LINE L1 4675 4999 -881 2 1559 246 294 65 0 chrX 127677576 127677668 -38972628 - HAL1 LINE L1 -809 1698 1601 2 1559 270 56 0 0 chrX 127677697 127677733 -38972563 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1559 446 316 121 55 chrX 127677829 127678483 -38971813 - HAL1 LINE L1 -1092 1415 719 2 1559 577 323 69 13 chrX 127678500 127678732 -38971564 - HAL1 LINE L1 -1849 658 414 2 1559 4122 21 29 0 chrX 127678824 127679303 -38970993 + MT2_Mm LTR ERVL 1 493 0 2 1559 876 147 53 0 chrX 127679426 127679576 -38970720 - URR1B DNA MER1_type 0 225 68 2 1559 765 230 65 43 chrX 127680279 127680465 -38969831 + B3A SINE B2 9 198 0 2 1559 370 321 57 79 chrX 127681545 127681772 -38968524 + MLT1A LTR MaLR 1 222 -152 2 1559 562 283 0 0 chrX 127681988 127682133 -38968163 + B1_Mur1 SINE Alu 2 146 -3 2 1559 204 143 17 35 chrX 127682139 127682197 -38968099 + GA-rich Low_complexity Low_complexity 1 57 0 2 1559 363 216 278 59 chrX 127682205 127682374 -38967922 - L1MC4a LINE L1 -146 7849 7569 2 1559 504 0 0 0 chrX 127682374 127682430 -38967866 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1559 336 216 278 59 chrX 127682430 127682539 -38967757 - L1MC4a LINE L1 -314 7568 7398 2 1559 1600 194 94 75 chrX 127682539 127682952 -38967344 - MTC LTR MaLR 0 421 1 2 1559 336 216 278 59 chrX 127682952 127682992 -38967304 - L1MC4a LINE L1 -485 7397 7355 2 1559 251 311 85 0 chrX 127683085 127683191 -38967105 - MLT1F1 LTR MaLR -454 115 1 2 1559 502 304 173 8 chrX 127683314 127683563 -38966733 + ORR1D2 LTR MaLR 1 290 -80 2 1559 449 254 108 45 chrX 127683778 127684025 -38966271 - L1MC4a LINE L1 -1276 6606 6351 2 1559 252 0 0 0 chrX 127684060 127684088 -38966208 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 1559 458 345 56 70 chrX 127684485 127684843 -38965453 - MT2A LTR ERVL -175 358 6 2 1559 831 236 82 51 chrX 127685088 127685343 -38964953 + Lx8 LINE L1 6651 6913 -560 2 1559 1209 243 125 34 chrX 127685344 127685728 -38964568 - MTD LTR MaLR 0 419 1 2 1559 567 330 21 5 chrX 127685744 127685930 -38964366 + Lx8 LINE L1 6961 7149 -324 2 1559 2611 206 41 12 chrX 127685930 127686491 -38963805 + RLTR20B3 LTR ERVK 1 577 0 2 1559 360 382 13 0 chrX 127686516 127686668 -38963628 + Lx8 LINE L1 7177 7330 -143 2 1559 3241 26 37 0 chrX 127688041 127688423 -38961873 + MTA_Mm LTR MaLR 1 396 0 2 1559 9396 25 1 0 chrX 127688423 127689520 -38960776 + MTA_Mm-int LTR MaLR 1 1098 0 2 1559 3241 26 37 0 chrX 127689520 127689902 -38960394 + MTA_Mm LTR MaLR 1 396 0 2 1559 564 334 54 59 chrX 127690466 127690760 -38959536 + B4A SINE B4 2 278 -14 2 1559 456 19 0 0 chrX 127690771 127690824 -38959472 + (GAAA)n Simple_repeat Simple_repeat 4 56 0 2 1559 788 219 6 18 chrX 127691617 127691780 -38958516 - MTE2b LTR MaLR -18 361 201 2 1559 8732 17 0 0 chrX 127691799 127692794 -38957502 + L1Md_A LINE L1 5587 6581 -1 2 1559 705 317 19 5 chrX 127692860 127693069 -38957227 - MTE2b LTR MaLR -163 216 5 2 1559 22 0 0 0 chrX 127693069 127693091 -38957205 + AT_rich Low_complexity Low_complexity 1 22 0 2 1559 1188 347 87 68 chrX 127693124 127693826 -38956470 + MER21B LTR ERV1 48 762 -101 2 1559 541 313 31 67 chrX 127693952 127694370 -38955926 + L1M7 LINE L1 1092 1494 -4724 2 1559 21 36 0 0 chrX 127695480 127695508 -38954788 + AT_rich Low_complexity Low_complexity 1 28 0 2 1559 357 374 24 16 chrX 127695756 127696006 -38954290 + L1M4 LINE L1 629 880 -5662 2 1559 22 35 0 0 chrX 127696019 127696048 -38954248 + AT_rich Low_complexity Low_complexity 1 29 0 2 1559 3001 50 159 0 chrX 127696050 127696466 -38953830 + RLTR45 LTR ERVK 1 482 0 2 1559 312 27 0 0 chrX 127696536 127696573 -38953723 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 2 1559 604 265 86 86 chrX 127696710 127696954 -38953342 - MLT2B1 LTR ERVL -257 263 20 2 1559 882 151 0 0 chrX 127697050 127697189 -38953107 - Lx LINE L1 -936 4947 4809 2 1559 6853 150 10 1 chrX 127697190 127698901 -38951395 + Lx LINE L1 4932 6654 0 2 1559 678 276 137 22 chrX 127699387 127699614 -38950682 + L1M4c LINE L1 2189 2436 -3948 2 1559 3358 46 0 0 chrX 127699614 127700025 -38950271 - L1Md_T LINE L1 -1 6581 6171 2 1559 678 274 181 19 chrX 127700025 127700447 -38949849 + L1M4c LINE L1 2437 2949 -3433 2 1559 324 0 0 0 chrX 127700447 127700483 -38949813 + (TTTTG)n Simple_repeat Simple_repeat 1 36 0 2 1559 678 274 181 19 chrX 127700483 127700607 -38949689 + L1M4c LINE L1 2950 3088 -3294 2 1559 279 224 26 26 chrX 127700743 127700821 -38949475 + Lx7 LINE L1 6769 6846 -850 2 1559 528 325 105 3 chrX 127700912 127701245 -38949051 + L1ME2 LINE L1 5618 5984 -180 2 1559 21 0 0 0 chrX 127701312 127701333 -38948963 + AT_rich Low_complexity Low_complexity 1 21 0 2 1559 21 0 0 0 chrX 127701348 127701369 -38948927 + AT_rich Low_complexity Low_complexity 1 21 0 2 1559 396 318 83 8 chrX 127701437 127701570 -38948726 + B1F1 SINE Alu 7 149 0 2 1559 372 221 11 0 chrX 127701695 127701790 -38948506 + L1MC LINE L1 3841 3936 -2210 2 1559 4177 39 81 0 chrX 127702128 127702646 -38947650 - LTRIS2 LTR ERV1 0 564 5 2 1559 586 290 25 45 chrX 127702940 127703142 -38947154 - B3 SINE B2 -18 198 1 2 1559 863 265 5 5 chrX 127703176 127703381 -38946915 - Lx6 LINE L1 -13 7447 7243 2 1559 1160 212 22 58 chrX 127703524 127703799 -38946497 + MTC LTR MaLR 1 265 -156 3 1559 2097 127 9 0 chrX 127703795 127704111 -38946185 - ORR1A2 LTR MaLR -8 319 1 3 1559 753 277 0 6 chrX 127704111 127704278 -38946018 + MTC LTR MaLR 254 419 0 3 1559 2139 62 51 0 chrX 127704386 127704662 -38945634 + L1_Mus1 LINE L1 6077 6366 -201 3 1559 240 200 0 0 chrX 127704801 127704851 -38945445 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1559 237 108 0 0 chrX 127704844 127704881 -38945415 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 3 1559 625 258 0 0 chrX 127704896 127705016 -38945280 - RSINE1 SINE B4 -44 121 2 3 1559 23 0 0 0 chrX 127706639 127706662 -38943634 + AT_rich Low_complexity Low_complexity 1 23 0 3 1559 241 222 0 85 chrX 127708542 127708601 -38941695 - B1F1 SINE Alu -88 61 8 3 1559 181 0 33 33 chrX 127708618 127708648 -38941648 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 3 1559 941 90 45 0 chrX 127708649 127708782 -38941514 - B1_Mus1 SINE Alu -9 139 1 3 1559 213 119 0 0 chrX 127708785 127708827 -38941469 + (T)n Simple_repeat Simple_repeat 1 42 0 3 1559 694 301 45 7 chrX 127709257 127709548 -38940748 - L1_Mur3 LINE L1 -539 5341 5040 3 1559 765 181 6 11 chrX 127710084 127710263 -38940033 + (TA)n Simple_repeat Simple_repeat 1 178 0 3 1559 877 167 7 0 chrX 127710264 127710408 -38939888 + B2_Mm2 SINE B2 6 150 -45 3 1559 896 77 7 20 chrX 127710418 127710564 -38939732 + (GAA)n Simple_repeat Simple_repeat 3 146 0 3 1559 2299 118 3 0 chrX 127710699 127711021 -38939275 - ORR1A2 LTR MaLR -4 323 1 3 1559 30 45 0 0 chrX 127712130 127712174 -38938122 + AT_rich Low_complexity Low_complexity 1 44 0 3 1559 210 196 0 51 chrX 127712292 127712351 -38937945 + T-rich Low_complexity Low_complexity 4 59 0 3 1559 1679 208 37 8 chrX 127712352 127712706 -38937590 - Lx4B LINE L1 -7 7051 6688 3 1559 2266 153 23 5 chrX 127712707 127713100 -38937196 + L1_Mur2 LINE L1 4799 5198 -679 3 1559 510 283 43 14 chrX 127713110 127713318 -38936978 - L1MCa LINE L1 -5406 1102 889 3 1559 1023 297 68 37 chrX 127713499 127713852 -38936444 - ORR1D2 LTR MaLR -6 364 1 3 1559 308 324 60 7 chrX 127713989 127714138 -38936158 - L1MCa LINE L1 -5779 729 573 3 1559 374 325 142 9 chrX 127714172 127714383 -38935913 - L1MCa LINE L1 -5914 594 356 3 1559 309 303 33 127 chrX 127714413 127714625 -38935671 + B2_Mm2 SINE B2 4 195 0 3 1559 21 0 0 0 chrX 127714629 127714650 -38935646 + AT_rich Low_complexity Low_complexity 1 21 0 3 1559 351 314 58 0 chrX 127714727 127714899 -38935397 - L1MCa LINE L1 -6305 203 22 3 1559 402 115 0 0 chrX 127714982 127715043 -38935253 + (TA)n Simple_repeat Simple_repeat 1 61 0 3 1559 531 345 100 4 chrX 127715107 127715346 -38934950 + MLT1F LTR MaLR 43 304 -244 3 1559 243 307 74 74 chrX 127715401 127715549 -38934747 + MLT1F LTR MaLR 396 543 -5 3 1559 282 347 80 5 chrX 127715977 127716164 -38934132 + MIR SINE MIR 51 247 -21 3 1559 31396 92 3 14 chrX 127716451 127721743 -38928553 + L1Md_F2 LINE L1 212 5507 -1075 3 1559 1094 212 128 36 chrX 127721743 127722047 -38928249 + IAPEY3_LTR LTR ERVK 1 332 0 3 1559 31396 92 3 14 chrX 127722047 127722853 -38927443 + L1Md_F2 LINE L1 5508 6315 -267 3 1559 3224 97 6 6 chrX 127722838 127723313 -38926983 - L1_Mm LINE L1 -485 5398 4924 3 1559 678 288 18 22 chrX 127723417 127723641 -38926655 + ID_B1 SINE B4 2 224 0 3 1559 476 275 105 11 chrX 127724114 127724305 -38925991 + B3 SINE B2 2 210 -6 3 1559 24 96 0 0 chrX 127725134 127725207 -38925089 + AT_rich Low_complexity Low_complexity 1 73 0 3 1559 493 280 187 0 chrX 127725931 127726113 -38924183 - B3 SINE B2 0 216 1 3 1559 396 317 25 52 chrX 127726327 127726502 -38923794 + MER5A DNA MER1_type 18 189 0 3 1559 342 332 37 46 chrX 127726697 127726967 -38923329 + L2a LINE L2 3187 3412 -14 3 1559 27 62 0 0 chrX 127727263 127727311 -38922985 + AT_rich Low_complexity Low_complexity 1 48 0 3 1559 358 344 41 66 chrX 127727320 127727516 -38922780 + B3A SINE B2 1 191 -7 3 1559 656 243 6 63 chrX 127727540 127727698 -38922598 + B1_Mur4 SINE Alu 2 150 0 3 1559 3016 70 0 0 chrX 127727965 127728363 -38921933 + L1Md_F2 LINE L1 6173 6570 -12 3 1559 929 99 0 13 chrX 127728877 127729031 -38921265 - L1_Mus4 LINE L1 -2 6634 6483 3 1559 189 0 0 0 chrX 127730768 127730789 -38919507 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1559 281 298 84 45 chrX 127731358 127731537 -38918759 + Lx8 LINE L1 7217 7402 -71 3 1559 1017 259 122 60 chrX 127732357 127732538 -38917758 - L1M2 LINE L1 -1216 5629 5458 3 1559 531 0 0 0 chrX 127732538 127732597 -38917699 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 1559 1017 259 122 60 chrX 127732597 127733093 -38917203 - L1M2 LINE L1 -1388 5457 4911 3 1559 679 289 63 11 chrX 127733096 127733285 -38917011 + B3 SINE B2 17 215 -1 3 1559 2345 264 86 23 chrX 127733289 127734124 -38916172 - L1M2 LINE L1 -1920 4925 4044 3 1559 303 28 0 0 chrX 127734124 127734160 -38916136 + (TAA)n Simple_repeat Simple_repeat 3 38 0 3 1559 2345 264 86 23 chrX 127734160 127734244 -38916052 - L1M2 LINE L1 -2802 4043 3934 3 1559 955 120 112 24 chrX 127734244 127734414 -38915882 - B2_Mm2 SINE B2 -9 186 2 3 1559 2345 264 86 23 chrX 127734414 127734583 -38915713 - L1M2 LINE L1 -2912 3933 3769 3 1559 321 271 139 58 chrX 127734579 127734873 -38915423 - L1M2 LINE L1 -3492 3353 3036 3 1559 293 333 67 43 chrX 127734989 127735365 -38914931 - L1M2 LINE L1 -3996 2853 2469 3 1559 3464 143 69 2 chrX 127735599 127736192 -38914104 - Lx2 LINE L1 -2 6995 6363 3 1559 4401 109 12 4 chrX 127736202 127736885 -38913411 - MusHAL1 LINE L1 -282 2430 1743 3 1559 7263 91 25 32 chrX 127736879 127738042 -38912254 - L1_Mur1 LINE L1 -1521 4365 3211 3 1559 1397 253 37 5 chrX 127738049 127738453 -38911843 - L1VL2 LINE L1 -5936 399 9 3 1559 375 256 58 75 chrX 127738457 127738736 -38911560 - L1M2 LINE L1 -4613 2236 1957 3 1559 882 252 46 33 chrX 127738857 127739196 -38911100 - Lx3C LINE L1 -19 6981 6614 3 1559 4818 173 15 9 chrX 127739193 127740044 -38910252 + Lx4B LINE L1 5756 6611 -447 3 1559 1416 192 38 87 chrX 127741807 127742200 -38908096 - ORR1D1 LTR MaLR 0 374 1 3 1559 222 235 0 0 chrX 127742502 127742553 -38907743 + T-rich Low_complexity Low_complexity 1 51 0 3 1559 394 134 93 0 chrX 127742557 127742654 -38907642 - Lx3_Mus LINE L1 -8 7001 6896 3 1559 1487 34 6 0 chrX 127742654 127742830 -38907466 + Lx3_Mus LINE L1 6337 6513 -496 3 1559 283 79 0 0 chrX 127744112 127744150 -38906146 + L1_Mm LINE L1 4878 4915 -968 3 1559 4426 94 56 5 chrX 127744914 127745583 -38904713 - L1_Mus2 LINE L1 0 6566 5893 3 1559 251 352 99 0 chrX 127746335 127746426 -38903870 + MIR SINE MIR 49 148 -114 3 1559 230 323 70 10 chrX 127746544 127746644 -38903652 + MIR SINE MIR 157 262 0 3 1559 25 31 0 0 chrX 127746883 127746915 -38903381 + AT_rich Low_complexity Low_complexity 1 32 0 3 1559 214 387 0 0 chrX 127746915 127746990 -38903306 + ID4 SINE ID 8 82 -1 3 1559 208 342 12 25 chrX 127747634 127747715 -38902581 - MIRb SINE MIR -13 255 176 3 1559 22 35 0 0 chrX 127748399 127748428 -38901868 + AT_rich Low_complexity Low_complexity 1 29 0 3 1559 21 0 0 0 chrX 127748569 127748590 -38901706 + AT_rich Low_complexity Low_complexity 1 21 0 3 1559 370 343 78 11 chrX 127748597 127748777 -38901519 - MIRc SINE MIR -1 267 76 3 1559 722 283 61 0 chrX 127748892 127749072 -38901224 - B3 SINE B2 -25 191 1 3 1559 281 331 129 24 chrX 127749155 127749279 -38901017 + MIR3 SINE MIR 45 181 -27 3 1559 306 346 71 0 chrX 127749779 127749906 -38900390 - ID_B1 SINE B4 0 224 89 3 1559 203 0 0 36 chrX 127750142 127750170 -38900126 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1559 249 222 0 0 chrX 127750556 127750619 -38899677 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 1559 486 242 75 9 chrX 127750882 127751050 -38899246 - Lx3C LINE L1 0 7000 6814 3 1559 4078 169 91 46 chrX 127751050 127751912 -38898384 - RMER19B LTR ERVK -2 900 1 3 1559 243 0 0 0 chrX 127753262 127753289 -38897007 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1559 867 274 5 5 chrX 127753300 127753509 -38896787 + B3 SINE B2 1 209 -7 3 1559 263 350 68 0 chrX 127753840 127753943 -38896353 + MIRb SINE MIR 32 141 -127 3 1559 8719 16 0 0 chrX 127753957 127755231 -38895065 - L1Md_A LINE L1 -3 6579 5306 3 1559 1739 195 35 56 chrX 127755397 127755772 -38894524 + ORR1D1 LTR MaLR 6 372 -2 3 1559 27315 137 8 17 chrX 127759944 127766206 -38884090 + L1_Mus3 LINE L1 430 6632 -6 3 1559 21 36 0 0 chrX 127766462 127766490 -38883806 + AT_rich Low_complexity Low_complexity 1 28 0 3 1559 297 245 40 60 chrX 127766505 127766605 -38883691 - RLTR14 LTR ERV1 -5 377 280 3 1559 965 299 7 40 chrX 127767290 127767590 -38882706 + RMER15 LTR ERVL 284 573 -2 3 1559 312 27 0 0 chrX 127767613 127767650 -38882646 + (T)n Simple_repeat Simple_repeat 1 37 0 3 1559 1429 330 15 44 chrX 127767821 127768435 -38881861 - Lx9 LINE L1 -394 7250 6655 3 1559 438 212 0 90 chrX 127768438 127768560 -38881736 + B3A SINE B2 43 143 -52 3 1559 1157 312 87 73 chrX 127768565 127768841 -38881455 - Lx8 LINE L1 -1003 6470 6181 3 1559 883 257 0 50 chrX 127768841 127769062 -38881234 - B3 SINE B2 -5 211 2 3 1559 1157 312 87 73 chrX 127769062 127769646 -38880650 - Lx8 LINE L1 -1293 6180 5599 3 1559 266 29 0 0 chrX 127769659 127769693 -38880603 - RLTR26 LTR ERVK 0 642 609 3 1559 580 90 0 0 chrX 127769688 127769766 -38880530 + B2_Mm2 SINE B2 7 84 -111 3 1559 279 284 11 43 chrX 127769766 127769779 -38880517 + RSINE1 SINE B4 8 95 -70 3 1559 5382 132 35 22 chrX 127769779 127770697 -38879599 - MERVK26-int LTR ERVK -5935 984 3 3 1559 3628 159 33 34 chrX 127770699 127771342 -38878954 - RLTR26 LTR ERVK 0 642 1 3 1559 607 224 45 28 chrX 127771342 127771521 -38878775 - Lx8 LINE L1 -290 5557 5376 3 1559 869 205 0 12 chrX 127771529 127771697 -38878599 - MTC LTR MaLR -255 166 1 3 1559 949 265 78 62 chrX 127771697 127772196 -38878100 - Lx8 LINE L1 -505 5342 4836 3 1559 252 59 0 0 chrX 127772235 127772269 -38878027 + (CAGAGA)n Simple_repeat Simple_repeat 3 36 0 3 1559 23 0 0 0 chrX 127772505 127772528 -38877768 + AT_rich Low_complexity Low_complexity 1 23 0 3 1559 2172 166 37 5 chrX 127773125 127773507 -38876789 - ORR1B1 LTR MaLR 0 394 1 3 1559 306 0 0 0 chrX 127773580 127773614 -38876682 + (TTA)n Simple_repeat Simple_repeat 1 34 0 3 1559 280 319 105 3 chrX 127773685 127773830 -38876466 - MIRc SINE MIR -64 204 40 3 1559 420 158 0 0 chrX 127774594 127774670 -38875626 + (TA)n Simple_repeat Simple_repeat 2 77 0 3 1559 272 48 24 0 chrX 127774878 127774920 -38875376 + (TTTAA)n Simple_repeat Simple_repeat 3 45 0 3 1559 5359 105 11 1 chrX 127774933 127775689 -38874607 - L1_Mus4 LINE L1 -29 6607 5845 4 1559 1711 28 14 22 chrX 127775699 127775921 -38874375 - L1Md_F3 LINE L1 -2 6582 6363 4 1559 414 0 0 0 chrX 127776106 127776152 -38874144 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1559 1813 96 22 7 chrX 127776234 127776544 -38873752 + L1Md_F2 LINE L1 6306 6582 0 4 1559 1180 231 124 6 chrX 127776835 127777166 -38873130 - ORR1D1 LTR MaLR 0 374 5 4 1559 605 243 27 1 chrX 127777341 127777508 -38872788 - MTD LTR MaLR 0 421 250 4 1559 335 374 15 0 chrX 127778091 127778222 -38872074 + Tigger10 DNA Tigger 1571 1703 -140 4 1559 180 0 0 0 chrX 127778226 127778246 -38872050 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1559 348 244 179 0 chrX 127778259 127778382 -38871914 + ORR1D-int LTR MaLR 1187 1331 -39 4 1559 2642 43 3 0 chrX 127779776 127780103 -38870193 - L1Md_T LINE L1 0 6582 6255 4 1559 911 208 106 5 chrX 127780555 127780753 -38869543 - URR1B DNA MER1_type 0 225 8 4 1559 329 401 30 35 chrX 127780831 127780898 -38869398 + MLT1A0 LTR MaLR 74 146 -219 4 1559 2217 117 46 0 chrX 127780898 127781249 -38869047 - Lx LINE L1 -5 6649 6283 4 1559 329 401 30 35 chrX 127781249 127781380 -38868916 + MLT1A0 LTR MaLR 147 270 -95 4 1559 2144 211 64 20 chrX 127781394 127781882 -38868414 + Lx7 LINE L1 6847 7357 -339 4 1559 1058 110 6 0 chrX 127781882 127782046 -38868250 + (TC)n Simple_repeat Simple_repeat 2 166 0 4 1559 950 231 48 48 chrX 127782230 127782567 -38867729 + Lx7 LINE L1 7356 7692 -4 4 1559 408 330 56 0 chrX 127782776 127782955 -38867341 - L1M5 LINE L1 -2869 3277 3089 4 1559 440 311 142 36 chrX 127782992 127783352 -38866944 - L1M5 LINE L1 -3171 2975 2578 4 1559 518 171 298 24 chrX 127783483 127783651 -38866645 - B3 SINE B2 0 216 3 4 1559 242 320 79 70 chrX 127783764 127784080 -38866216 - RMER10A LTR ERVL -123 319 1 4 1559 23 33 0 0 chrX 127784513 127784543 -38865753 + AT_rich Low_complexity Low_complexity 1 30 0 4 1559 328 269 0 0 chrX 127784775 127784842 -38865454 + ID4 SINE ID 1 67 -16 4 1559 1783 297 57 28 chrX 127785694 127786008 -38864288 + L1_Rod LINE L1 1161 1477 -4370 4 1559 2886 86 10 10 chrX 127786008 127786408 -38863888 + MTB LTR MaLR 1 400 0 4 1559 1783 321 70 26 chrX 127786408 127787339 -38862957 + L1_Rod LINE L1 1478 2458 -3389 4 1559 33 43 0 0 chrX 127787691 127787738 -38862558 + AT_rich Low_complexity Low_complexity 1 47 0 4 1559 647 275 0 7 chrX 127788109 127788259 -38862037 - B1_Mur1 SINE Alu 0 149 1 4 1559 640 282 72 72 chrX 127788400 127788733 -38861563 - MLT1A LTR MaLR -38 336 4 4 1559 265 131 33 0 chrX 127789418 127789479 -38860817 + CT-rich Low_complexity Low_complexity 2 64 0 4 1559 258 105 0 0 chrX 127789480 127789518 -38860778 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1559 191 282 35 103 chrX 127791772 127791859 -38858437 + L2a LINE L2 3341 3421 -5 4 1559 713 299 63 29 chrX 127792062 127792300 -38857996 - MLT1B LTR MaLR -1 389 144 4 1559 213 121 0 0 chrX 127792907 127792940 -38857356 + (A)n Simple_repeat Simple_repeat 1 33 0 4 1559 1302 298 16 0 chrX 127792940 127793262 -38857034 - MTE2b LTR MaLR -37 342 16 4 1559 861 74 0 16 chrX 127793572 127793686 -38856610 + B1_Mus1 SINE Alu 26 139 -9 4 1559 252 0 0 0 chrX 127793686 127793714 -38856582 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 4 1559 28 0 0 0 chrX 127793936 127793964 -38856332 + AT_rich Low_complexity Low_complexity 1 28 0 4 194 623 112 9 0 chrX 127795152 127795259 -38855037 + (TG)n Simple_repeat Simple_repeat 1 108 0 4 1560 181 346 52 37 chrX 127795509 127795644 -38854652 + L2 LINE L2 2566 2702 -717 4 1560 7230 91 4 6 chrX 127795969 127797301 -38852995 + L1_Mus2 LINE L1 5237 6564 -2 4 1560 444 82 0 0 chrX 127797309 127797370 -38852926 + (GGGGA)n Simple_repeat Simple_repeat 4 64 0 4 1560 608 0 0 14 chrX 127797371 127797444 -38852852 + (GAAAA)n Simple_repeat Simple_repeat 1 72 0 4 1560 372 289 10 0 chrX 127797560 127797664 -38852632 + Ricksha DNA MuDR 384 488 -2758 4 1560 449 259 96 29 chrX 127797704 127797943 -38852353 + Ricksha DNA MuDR 2311 2565 -681 4 1560 261 0 0 0 chrX 127798101 127798130 -38852166 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1560 430 341 61 0 chrX 127798486 127798618 -38851678 + B3A SINE B2 9 148 -50 4 1560 732 43 0 0 chrX 127798624 127798716 -38851580 + (CA)n Simple_repeat Simple_repeat 1 92 0 4 1560 369 0 0 0 chrX 127798716 127798756 -38851540 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 1560 28 29 0 0 chrX 127799147 127799182 -38851114 + AT_rich Low_complexity Low_complexity 1 35 0 4 1560 6384 48 1 6 chrX 127799188 127799984 -38850312 - L1Md_F3 LINE L1 -63 6521 5730 4 1560 290 263 113 64 chrX 127799984 127800187 -38850109 - L1MA4A LINE L1 -395 5908 5696 4 1560 486 33 0 0 chrX 127800406 127800466 -38849830 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 1560 435 235 67 73 chrX 127800968 127801147 -38849149 + MamRep564 Unknown Unknown 64 241 -116 4 1560 1475 292 11 14 chrX 127802119 127802490 -38847806 - MTE2b LTR MaLR -9 370 1 4 1560 1142 225 66 63 chrX 127802520 127802649 -38847647 - RLTR14 LTR ERV1 -2 380 247 4 1560 222 37 0 0 chrX 127802649 127802676 -38847620 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1560 1142 225 66 63 chrX 127802676 127802925 -38847371 - RLTR14 LTR ERV1 -136 246 1 4 1560 267 197 121 0 chrX 127804474 127804540 -38845756 + MIR SINE MIR 81 154 -108 4 1560 21 0 0 0 chrX 127804694 127804715 -38845581 + AT_rich Low_complexity Low_complexity 1 21 0 4 1560 1443 171 33 118 chrX 127805381 127805474 -38844822 - ORR1B1 LTR MaLR 0 394 306 4 1560 5667 65 1 7 chrX 127805474 127806220 -38844076 - L1Md_F2 LINE L1 0 6582 5841 4 1560 1443 174 39 114 chrX 127806220 127806518 -38843778 - ORR1B1 LTR MaLR -89 305 26 4 1560 1062 288 34 14 chrX 127806518 127806867 -38843429 + Lx6 LINE L1 7099 7454 -6 4 1560 227 217 67 0 chrX 127807066 127807116 -38843180 - Charlie9 DNA MER1_type -34 2723 2670 4 1560 282 29 0 0 chrX 127807116 127807151 -38843145 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 1560 279 54 0 0 chrX 127807511 127807548 -38842748 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1560 1863 146 13 0 chrX 127807619 127807921 -38842375 + ORR1A2 LTR MaLR 22 327 0 4 1560 445 268 72 59 chrX 127808741 127808963 -38841333 + MIR SINE MIR 27 251 -11 4 1560 284 309 12 12 chrX 127810715 127810797 -38839499 - LFSINE_Vert SINE SINE -271 188 107 4 1560 297 200 56 14 chrX 127811201 127811272 -38839024 + MLT1A0 LTR MaLR 4 77 -288 4 1560 432 0 0 0 chrX 127811307 127811355 -38838941 + (CTATA)n Simple_repeat Simple_repeat 3 50 0 4 1560 236 235 0 56 chrX 127811423 127811477 -38838819 + MLT1A0 LTR MaLR 300 350 -58 4 1560 479 264 105 23 chrX 127811492 127811663 -38838633 + Lx8 LINE L1 7168 7352 -121 4 1560 192 40 0 0 chrX 127811750 127811775 -38838521 + (TAA)n Simple_repeat Simple_repeat 2 26 0 4 1560 401 187 2 12 chrX 127813089 127813185 -38837111 - B1_Mur1 SINE Alu -20 129 34 4 1560 693 244 144 11 chrX 127813391 127813565 -38836731 - B3 SINE B2 -8 208 12 4 1560 450 0 0 0 chrX 127813606 127813656 -38836640 + (TC)n Simple_repeat Simple_repeat 2 51 0 4 1560 463 263 56 35 chrX 127813741 127814062 -38836234 - RMER17C LTR ERVK -52 358 1 4 1560 3022 129 61 10 chrX 127814074 127814582 -38835714 + Lx LINE L1 6121 6654 0 4 1560 512 250 9 0 chrX 127814585 127814693 -38835603 - B3A SINE B2 -62 136 28 4 1560 794 35 0 26 chrX 127814894 127815011 -38835285 - L1Md_F3 LINE L1 -14 6570 6457 4 1560 262 225 56 14 chrX 127815222 127815294 -38835002 - L2a LINE L2 0 3426 3352 4 1560 1047 302 58 58 chrX 127815684 127816151 -38834145 + MER34A1 LTR ERV1 55 521 -66 4 1560 333 340 92 41 chrX 127817146 127817545 -38832751 + L1M5 LINE L1 4533 4956 -1190 4 1560 333 320 31 0 chrX 127818293 127818390 -38831906 + PB1D10 SINE Alu 16 115 -2 4 1560 418 377 17 24 chrX 127819031 127819322 -38830974 + B4A SINE B4 2 290 -2 4 1560 314 266 31 52 chrX 127819580 127819774 -38830522 + L1M5 LINE L1 5283 5472 -652 4 1560 244 247 49 49 chrX 127819804 127819885 -38830411 - RLTR1B LTR ERV1 -205 307 227 4 1560 306 335 100 18 chrX 127819885 127820055 -38830241 + L1MC LINE L1 5624 5807 -2075 4 1560 288 304 67 77 chrX 127820250 127820549 -38829747 + L1MA9 LINE L1 5958 6253 -59 4 1560 508 276 37 32 chrX 127820554 127820725 -38829571 + B3A SINE B2 4 180 -18 4 1560 306 0 0 0 chrX 127820725 127820759 -38829537 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1560 508 276 37 32 chrX 127820759 127820774 -38829522 + B3A SINE B2 181 191 -7 4 1560 252 0 0 0 chrX 127822605 127822633 -38827663 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1560 415 287 33 48 chrX 127822695 127822929 -38827367 - MLT2C1 LTR ERVL -57 340 58 4 1560 292 289 207 7 chrX 127823027 127823177 -38827119 + MLT1A LTR MaLR 194 373 -1 4 1560 1310 240 114 0 chrX 127823333 127823779 -38826517 + L1M2 LINE L1 3412 3908 -2235 4 1560 493 272 16 16 chrX 127824079 127824206 -38826090 - RSINE1 SINE B4 -36 129 3 4 1560 22 0 0 0 chrX 127824328 127824350 -38825946 + AT_rich Low_complexity Low_complexity 1 22 0 4 1560 985 296 60 16 chrX 127825143 127825459 -38824837 - ORR1D2 LTR MaLR -1 369 40 4 1560 239 232 56 88 chrX 127827060 127827208 -38823088 - MIRb SINE MIR -24 244 88 4 1560 374 206 14 14 chrX 127827563 127827637 -38822659 + ORR1C2 LTR MaLR 3 76 -308 4 1560 22 88 0 0 chrX 127828440 127828497 -38821799 + AT_rich Low_complexity Low_complexity 1 57 0 4 1560 21 0 0 0 chrX 127829665 127829686 -38820610 + AT_rich Low_complexity Low_complexity 1 21 0 4 1560 301 331 100 22 chrX 127829764 127829945 -38820351 - MIRb SINE MIR -57 211 17 4 1560 473 233 20 88 chrX 127830155 127830365 -38819931 + B3A SINE B2 19 203 -13 4 1560 197 296 0 36 chrX 127830809 127830865 -38819431 - MIRc SINE MIR -171 97 44 4 1560 224 358 83 0 chrX 127831917 127832026 -38818270 - MIR SINE MIR -54 208 91 4 1560 213 132 0 0 chrX 127832239 127832277 -38818019 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1560 258 301 82 27 chrX 127832299 127832446 -38817850 + L2 LINE L2 2229 2383 -1036 5 1560 5895 99 7 2 chrX 127832911 127833744 -38816552 - Lx LINE L1 -8 6646 5810 5 1560 461 200 10 0 chrX 127833746 127833846 -38816450 - L1_Mur1 LINE L1 -806 5080 4980 5 1560 874 88 0 64 chrX 127833859 127834016 -38816280 - L1_Mus1 LINE L1 -3 6564 6418 5 1560 268 103 0 0 chrX 127834016 127834055 -38816241 - Lx2 LINE L1 -1153 5844 5806 5 1560 26861 119 14 10 chrX 127834048 127838905 -38811391 - Lx2 LINE L1 -801 5082 203 5 1560 15615 185 18 19 chrX 127838913 127841863 -38808433 - L1_Mm LINE L1 -901 4982 2049 5 1560 360 0 0 0 chrX 127841863 127841903 -38808393 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1560 15615 185 18 19 chrX 127841903 127842236 -38808060 - L1_Mm LINE L1 -3835 2048 1705 5 1560 8653 98 15 7 chrX 127842254 127844247 -38806049 - L1_Mus3 LINE L1 -6 6632 4629 5 1560 288 0 0 0 chrX 127844247 127844279 -38806017 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 1560 8653 105 17 11 chrX 127844279 127844331 -38805965 - L1_Mus3 LINE L1 -1255 4628 4577 5 1560 2988 103 11 10 chrX 127844328 127844893 -38805403 - L1VL4 LINE L1 -2261 1298 713 5 1560 3334 98 6 19 chrX 127844893 127845379 -38804917 - L1_Mus3 LINE L1 -8 6630 6151 5 1560 2921 170 49 36 chrX 127845379 127845734 -38804562 - L1VL4 LINE L1 -5590 712 372 5 1560 228 323 46 0 chrX 127845753 127845818 -38804478 + MIRc SINE MIR 72 139 -129 5 1560 671 288 44 0 chrX 127845976 127846181 -38804115 + B3 SINE B2 1 214 -2 5 1560 517 318 26 16 chrX 127846714 127846902 -38803394 + B3 SINE B2 1 193 0 5 1560 238 333 127 8 chrX 127847457 127847575 -38802721 + MER5A DNA MER1_type 3 134 -55 5 1560 603 274 32 79 chrX 127847921 127848111 -38802185 - B3A SINE B2 -16 182 2 5 1560 7314 42 2 1 chrX 127849244 127850132 -38800164 - L1Md_F2 LINE L1 -10 6572 5684 5 1560 431 250 11 0 chrX 127850531 127850623 -38799673 + RSINE1 SINE B4 36 128 -37 5 1560 402 85 0 0 chrX 127850635 127850694 -38799602 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1560 195 42 0 0 chrX 127850706 127850730 -38799566 + (CAA)n Simple_repeat Simple_repeat 1 24 0 5 1560 25 0 0 0 chrX 127850765 127850790 -38799506 + AT_rich Low_complexity Low_complexity 1 25 0 5 1560 2534 79 57 0 chrX 127850898 127850933 -38799363 - Lx3_Mus LINE L1 -1049 5960 5926 5 1560 321 26 0 0 chrX 127850933 127850971 -38799325 + (TTA)n Simple_repeat Simple_repeat 2 39 0 5 1560 7007 89 37 8 chrX 127850971 127852030 -38798266 - Lx3_Mus LINE L1 -1084 5925 4837 5 1560 6066 100 42 16 chrX 127852030 127852993 -38797303 + Lx3_Mus LINE L1 6022 7009 0 5 1560 410 283 198 35 chrX 127853310 127853907 -38796389 + L1MEe LINE L1 330 1023 -3831 5 1560 25 51 0 0 chrX 127855371 127855410 -38794886 + AT_rich Low_complexity Low_complexity 1 39 0 5 1560 5967 63 4 0 chrX 127855690 127856451 -38793845 + L1_Mus1 LINE L1 5803 6566 -1 5 1560 339 303 132 6 chrX 127856870 127857036 -38793260 - L1MC1 LINE L1 -18 6315 6129 5 1560 920 155 160 0 chrX 127857118 127857312 -38792984 - URR1B DNA MER1_type 0 225 1 5 1560 1559 239 130 36 chrX 127857326 127857765 -38792531 + RMER15 LTR ERVL 28 507 -68 5 1560 1081 218 275 50 chrX 127857808 127857827 -38792469 - MT2B LTR ERVL -111 490 472 5 1560 1505 36 0 25 chrX 127857827 127858029 -38792267 + L1Md_F2 LINE L1 6384 6580 -2 5 1560 1081 218 275 50 chrX 127858029 127858409 -38791887 - MT2B LTR ERVL -130 471 1 5 1560 1652 297 95 19 chrX 127858883 127859786 -38790510 - L1MC1 LINE L1 -200 6133 5159 5 1560 297 0 0 0 chrX 127861473 127861506 -38788790 + (T)n Simple_repeat Simple_repeat 1 33 0 5 1560 250 121 30 0 chrX 127861622 127861688 -38788608 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 5 1560 271 259 35 0 chrX 127862179 127862264 -38788032 - L1MB8 LINE L1 -3 6175 6088 5 1560 237 22 65 22 chrX 127862281 127862327 -38787969 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 5 1560 1113 75 0 0 chrX 127862327 127862474 -38787822 - B1_Mus1 SINE Alu 0 148 2 5 1560 21 36 0 0 chrX 127862892 127862920 -38787376 + AT_rich Low_complexity Low_complexity 1 28 0 5 1560 574 247 63 0 chrX 127862937 127863095 -38787201 - L1MB8 LINE L1 -248 5930 5763 5 1560 257 333 18 49 chrX 127863696 127863860 -38786436 - MIR SINE MIR 0 262 104 5 1560 648 188 189 24 chrX 127863906 127864070 -38786226 - RMER6A LTR ERVK 0 690 500 5 1560 263 85 0 21 chrX 127864091 127864139 -38786157 + (AACTG)n Simple_repeat Simple_repeat 1 47 0 5 1560 1953 167 44 8 chrX 127864620 127864926 -38785370 - RMER6A LTR ERVK -381 375 57 5 1560 585 76 0 0 chrX 127864926 127865005 -38785291 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 5 1560 1953 167 44 8 chrX 127865005 127865060 -38785236 - RMER6A LTR ERVK -700 56 2 5 1560 242 29 29 0 chrX 127865751 127865786 -38784510 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 5 1560 308 94 19 0 chrX 127865821 127865874 -38784422 + (TTTG)n Simple_repeat Simple_repeat 2 55 0 5 1560 318 26 0 0 chrX 127866718 127866757 -38783539 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1560 1036 200 15 45 chrX 127866786 127867053 -38783243 - Lx5 LINE L1 -937 6113 5855 5 1560 3110 179 50 96 chrX 127867057 127867499 -38782797 - L1_Mur2 LINE L1 -3358 2519 2052 5 1560 309 68 0 0 chrX 127867499 127867543 -38782753 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1560 3110 179 50 96 chrX 127867543 127867695 -38782601 - L1_Mur2 LINE L1 -3826 2051 1959 5 1560 1220 41 7 0 chrX 127867695 127867841 -38782455 - B1_Mm SINE Alu 0 147 1 5 1560 3110 179 50 96 chrX 127867841 127868086 -38782210 - L1_Mur2 LINE L1 -3919 1958 1719 5 1560 2961 320 43 53 chrX 127869096 127870559 -38779737 - Lx8 LINE L1 -5 7468 6021 5 1560 1305 146 0 0 chrX 127870644 127870843 -38779453 + ORR1A2 LTR MaLR 1 199 -128 5 1560 1071 139 12 0 chrX 127870843 127871008 -38779288 + MERVL_2A-int LTR ERVL 1489 1655 -4106 5 1560 6603 170 13 44 chrX 127870998 127872282 -38778014 - MERVL-int LTR ERVL -4165 1320 77 5 1560 261 0 0 0 chrX 127872320 127872349 -38777947 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 5 1560 293 148 0 0 chrX 127872350 127872411 -38777885 - Lx3A LINE L1 -16 6965 6905 5 1560 16585 97 146 38 chrX 127872389 127874945 -38775351 - Lx3A LINE L1 -697 6284 3281 5 1560 2943 118 33 0 chrX 127874945 127875368 -38774928 - RLTR9B LTR ERVK 0 437 1 5 1560 16585 96 148 35 chrX 127875368 127875842 -38774454 - Lx3A LINE L1 -2606 3280 2822 5 1560 562 41 0 0 chrX 127875842 127875915 -38774381 - B1_Mur4 SINE Alu 0 150 78 5 1560 16585 96 148 35 chrX 127875915 127876139 -38774157 - Lx3A LINE L1 -2606 2821 2604 5 1560 2146 121 15 6 chrX 127876145 127876479 -38773817 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 1560 5838 64 13 8 chrX 127876481 127877248 -38773048 - IAPEz-int LTR ERVK -2 6479 5709 5 1560 3102 20 0 0 chrX 127877239 127877596 -38772700 - IAPEz-int LTR ERVK -2124 4357 4001 5 1560 387 89 0 0 chrX 127877594 127877650 -38772646 - IAPEz-int LTR ERVK -3707 2774 2719 5 1560 17245 56 45 23 chrX 127877649 127879936 -38770360 - IAPEz-int LTR ERVK -4136 2345 8 5 1560 2146 121 15 6 chrX 127879936 127880270 -38770026 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 1560 9268 109 65 3 chrX 127880270 127882524 -38767772 - Lx3A LINE L1 -3305 2581 167 5 1560 663 190 16 77 chrX 127882559 127882741 -38767555 - Lx8 LINE L1 -1553 5920 5750 5 1560 212 258 0 0 chrX 127883012 127883074 -38767222 + A-rich Low_complexity Low_complexity 1 62 0 5 1560 3941 167 13 24 chrX 127883493 127884193 -38766103 + RLTR17 LTR ERVK 1 692 0 5 1560 304 271 12 104 chrX 127884214 127884387 -38765909 - L1M5 LINE L1 -2579 3567 3411 5 1560 876 273 0 18 chrX 127885345 127885565 -38764731 - B3 SINE B2 0 216 1 5 1560 250 338 70 19 chrX 127885571 127885728 -38764568 - MIR SINE MIR -10 252 88 5 1560 205 152 0 0 chrX 127886358 127886391 -38763905 + GA-rich Low_complexity Low_complexity 1 33 0 5 1560 375 23 0 0 chrX 127886400 127886444 -38763852 + (TAA)n Simple_repeat Simple_repeat 1 44 0 5 1560 450 322 54 40 chrX 127886468 127886691 -38763605 - MIR SINE MIR -22 240 15 5 1560 189 238 125 16 chrX 127886787 127886851 -38763445 + MIRb SINE MIR 192 262 -6 5 1560 1149 82 0 0 chrX 127888063 127888221 -38762075 + (GAA)n Simple_repeat Simple_repeat 3 160 0 5 1560 30361 108 20 2 chrX 127888229 127894077 -38756219 + L1_Mus1 LINE L1 608 6566 -1 5 1560 809 234 8 41 chrX 127894088 127894130 -38756166 - RMER17C LTR ERVK -170 240 200 5 1560 1391 28 0 17 chrX 127894130 127894311 -38755985 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 5 1560 809 235 21 37 chrX 127894311 127894536 -38755760 - RMER17C LTR ERVK -722 236 4 5 1560 676 209 45 13 chrX 127895144 127895299 -38754997 - MER5A1 DNA MER1_type 0 166 7 5 1560 236 378 5 75 chrX 127895561 127895747 -38754549 + MER5B DNA MER1_type 1 173 -5 5 1560 687 271 164 46 chrX 127896087 127896416 -38753880 - ORR1D2 LTR MaLR -2 368 1 5 1560 226 232 0 51 chrX 127896908 127896967 -38753329 + CT-rich Low_complexity Low_complexity 2 57 0 5 1560 880 128 28 34 chrX 127896967 127897145 -38753151 - Lx LINE L1 0 6654 6478 5 1560 25 31 0 0 chrX 127897293 127897325 -38752971 + AT_rich Low_complexity Low_complexity 1 32 0 5 1560 193 324 28 14 chrX 127897528 127897600 -38752696 - MIRm SINE MIR -8 268 196 5 1560 14447 66 4 2 chrX 127899289 127901863 -38748433 + L1Md_F2 LINE L1 4010 6582 0 5 1560 607 340 102 45 chrX 127901870 127902184 -38748112 + LTR40b LTR ERVL 120 451 -11 5 1560 198 0 0 0 chrX 127902314 127902336 -38747960 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1560 255 293 35 69 chrX 127902420 127902539 -38747757 - MIRc SINE MIR -97 179 62 5 1560 191 75 0 70 chrX 127902909 127902952 -38747344 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 5 1560 929 69 122 0 chrX 127902952 127903083 -38747213 - B1_Mm SINE Alu 0 147 1 5 1560 242 274 10 134 chrX 127903676 127903773 -38746523 - MER63B DNA AcHobo -47 389 305 5 1560 1115 278 62 46 chrX 127904381 127904770 -38745526 - MTD LTR MaLR 0 419 25 5 1560 792 83 0 0 chrX 127906682 127906791 -38743505 + (GAA)n Simple_repeat Simple_repeat 1 109 0 5 1560 648 278 39 14 chrX 127907322 127907530 -38742766 + B3 SINE B2 1 213 -3 5 1560 499 320 15 38 chrX 127908159 127908292 -38742004 + RSINE1 SINE B4 3 132 -33 5 1560 389 281 64 14 chrX 127908502 127908643 -38741653 + B1_Mur1 SINE Alu 2 149 0 5 1560 513 358 83 24 chrX 127908665 127909006 -38741290 + MLT1A0 LTR MaLR 3 406 -2 5 1560 337 188 24 0 chrX 127909657 127909742 -38740554 + (TA)n Simple_repeat Simple_repeat 1 87 0 5 1560 784 327 31 50 chrX 127909790 127910048 -38740248 + B4A SINE B4 39 291 -1 5 1560 360 43 0 0 chrX 127910077 127910123 -38740173 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1560 2803 76 30 22 chrX 127911122 127911527 -38738769 + L1Md_F2 LINE L1 6175 6582 0 5 1560 438 108 0 0 chrX 127911887 127911952 -38738344 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 1560 4662 142 51 13 chrX 127912005 127912825 -38737471 + Lx3C LINE L1 6031 6881 -95 5 1560 182 128 26 0 chrX 127912855 127912894 -38737402 + A-rich Low_complexity Low_complexity 6 45 0 5 1560 510 340 10 83 chrX 127912895 127913100 -38737196 + B4A SINE B4 9 198 -94 5 1560 261 0 0 0 chrX 127913696 127913725 -38736571 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1560 331 223 84 21 chrX 127913741 127913883 -38736413 + L1MD LINE L1 5136 5286 -860 5 1560 412 322 88 21 chrX 127913927 127914165 -38736131 - MLT1A0 LTR MaLR 0 365 112 5 1560 213 261 21 11 chrX 127914938 127915031 -38735265 + (TTA)n Simple_repeat Simple_repeat 2 95 0 6 1560 1214 284 30 8 chrX 127915584 127915957 -38734339 - Lx8 LINE L1 -530 6943 6563 6 1560 313 265 59 0 chrX 127916099 127916167 -38734129 - B1_Mur3 SINE Alu -38 111 40 6 1560 515 277 77 27 chrX 127916248 127916545 -38733751 - L1M4c LINE L1 -1027 5355 5044 6 1560 1008 306 81 30 chrX 127916541 127917371 -38732925 - L1M4c LINE L1 -2122 4260 3389 6 1560 351 0 0 0 chrX 127917478 127917517 -38732779 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 6 1560 790 303 96 7 chrX 127917606 127918022 -38732274 + L1M4 LINE L1 2495 2947 -3199 6 1560 832 293 171 45 chrX 127918020 127918746 -38731550 - L1M4c LINE L1 -4354 2030 1214 6 1560 777 274 84 20 chrX 127918777 127919168 -38731128 - L1M4c LINE L1 -5245 1139 724 6 1560 414 0 0 0 chrX 127919168 127919214 -38731082 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1560 34167 80 4 9 chrX 127919298 127922655 -38727641 - L1Md_F2 LINE L1 -1 6581 3240 6 1560 8324 37 0 1 chrX 127922655 127923652 -38726644 + L1Md_T LINE L1 5587 6582 0 6 24 34167 96 11 39 chrX 127923652 127926590 -38723706 - L1Md_F2 LINE L1 -2644 3239 394 6 1561 203 234 15 15 chrX 127926661 127926726 -38723570 + (TA)n Simple_repeat Simple_repeat 1 65 0 6 1561 972 313 45 62 chrX 127926729 127927291 -38723005 - L1M4c LINE L1 -5814 570 19 6 1561 225 233 0 0 chrX 127927738 127927781 -38722515 + MamRep434 DNA TcMar 1 43 -383 6 1561 428 77 0 15 chrX 127927854 127927920 -38722376 + (CA)n Simple_repeat Simple_repeat 2 66 0 6 1561 195 42 0 0 chrX 127928276 127928300 -38721996 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1561 453 36 0 0 chrX 127929631 127929686 -38720610 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1561 1109 58 0 0 chrX 127930037 127930174 -38720122 + B1_Mus2 SINE Alu 2 138 -9 6 1561 783 0 0 0 chrX 127930174 127930261 -38720035 + (GAA)n Simple_repeat Simple_repeat 2 88 0 6 1561 278 395 24 43 chrX 127930580 127930744 -38719552 + RSINE1 SINE B4 3 163 -2 6 1561 843 301 0 10 chrX 127930774 127930975 -38719321 + B3 SINE B2 6 204 -12 6 1561 252 357 34 25 chrX 127931152 127931270 -38719026 - MIRm SINE MIR -3 273 155 6 1561 856 314 13 9 chrX 127931792 127932020 -38718276 - Tigger5 DNA MER2_type -2083 323 95 6 1561 195 220 0 0 chrX 127932076 127932126 -38718170 + (TATATG)n Simple_repeat Simple_repeat 3 52 0 6 1561 232 339 8 122 chrX 127932129 127932260 -38718036 - B4 SINE B4 -122 170 55 6 1561 8309 119 25 14 chrX 127932314 127933630 -38716666 + Lx3C LINE L1 5666 6974 -2 6 1561 21 0 0 0 chrX 127933972 127933993 -38716303 + AT_rich Low_complexity Low_complexity 1 21 0 6 1561 23 33 0 0 chrX 127934866 127934896 -38715400 + AT_rich Low_complexity Low_complexity 1 30 0 6 1561 626 312 60 0 chrX 127935104 127935303 -38714993 - ID_B1 SINE B4 -12 212 2 6 1561 309 273 70 10 chrX 127935398 127935511 -38714785 - MLT1A LTR MaLR -19 448 261 6 1561 279 0 0 0 chrX 127935579 127935610 -38714686 + (TTA)n Simple_repeat Simple_repeat 3 33 0 6 1561 1168 272 65 14 chrX 127935610 127935961 -38714335 - Lx6 LINE L1 -26 7434 7066 6 1561 376 358 36 7 chrX 127936022 127936160 -38714136 - MLT1A LTR MaLR -230 144 3 6 1561 252 0 0 0 chrX 127936918 127936946 -38713350 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1561 2448 63 42 31 chrX 127936947 127937198 -38713098 + L1_Mus2 LINE L1 6203 6453 -113 6 1561 6125 50 42 4 chrX 127937198 127937976 -38712320 - RLTR13C2 LTR ERVK 0 808 1 6 1561 2448 63 42 31 chrX 127937976 127938083 -38712213 + L1_Mus2 LINE L1 6454 6563 -3 6 1561 552 87 9 46 chrX 127938097 127938206 -38712090 + L1_Mus3 LINE L1 6534 6638 0 6 1561 234 316 61 10 chrX 127938204 127938310 -38711986 + L1ME2z LINE L1 5470 5578 -866 6 1561 386 260 139 33 chrX 127938330 127938481 -38711815 + LTR48 LTR ERV1 1 167 -620 6 1561 277 203 31 0 chrX 127939489 127939553 -38710743 + L1ME2z LINE L1 5630 5695 -749 6 1561 254 316 108 52 chrX 127939644 127940045 -38710251 + L1ME2z LINE L1 5842 6275 -169 6 1561 1054 90 7 0 chrX 127940045 127940190 -38710106 + B1_Mus1 SINE Alu 1 146 -2 6 1561 252 0 0 0 chrX 127940190 127940218 -38710078 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 6 1561 254 316 108 52 chrX 127940218 127940279 -38710017 + L1ME2z LINE L1 6276 6330 -114 6 1561 448 323 44 22 chrX 127940346 127940482 -38709814 + RSINE1 SINE B4 11 149 -16 6 1561 345 330 37 9 chrX 127941678 127941785 -38708511 + PB1D10 SINE Alu 3 112 -5 6 1561 392 312 78 21 chrX 127941867 127942008 -38708288 + B4A SINE B4 10 158 -134 6 1561 238 326 0 0 chrX 127942076 127942125 -38708171 + RSINE1 SINE B4 100 148 -17 6 1561 1208 244 42 22 chrX 127945107 127945468 -38704828 - ORR1D2 LTR MaLR -2 368 1 6 1561 471 18 0 0 chrX 127945754 127945810 -38704486 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 1561 888 188 180 0 chrX 127945810 127946078 -38704218 - Lx9 LINE L1 -156 7488 7173 6 1561 244 125 0 0 chrX 127946267 127946307 -38703989 - MLT1D LTR MaLR -3 624 585 6 1561 590 328 0 48 chrX 127946289 127946478 -38703818 - MLT1D LTR MaLR -59 446 267 6 1561 282 193 5 11 chrX 127946525 127946592 -38703704 - B1_Mus1 SINE Alu -83 66 1 6 1561 288 216 0 0 chrX 127946656 127946707 -38703589 + ID_B1 SINE B4 165 215 -9 6 1561 646 239 58 29 chrX 127946723 127946930 -38703366 + Lx8 LINE L1 7258 7470 -3 6 1561 269 284 52 21 chrX 127947011 127947108 -38703188 - MLT1D LTR MaLR -383 122 23 6 1561 736 207 43 0 chrX 127947191 127947331 -38702965 - B1_Mus2 SINE Alu -1 146 1 6 1561 315 301 44 9 chrX 127948835 127948949 -38701347 - HAL1-3A_ME LINE L1 -70 2788 2671 6 1561 326 204 28 9 chrX 127948949 127949058 -38701238 + CT-rich Low_complexity Low_complexity 4 114 0 6 1561 1702 299 99 21 chrX 127949063 127949833 -38700463 - Lx7 LINE L1 -2 7471 6622 6 1561 405 0 0 0 chrX 127950040 127950085 -38700211 + (TC)n Simple_repeat Simple_repeat 1 45 0 6 1561 306 0 0 0 chrX 127950085 127950118 -38700178 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1561 768 253 100 0 chrX 127950507 127950697 -38699599 + B3 SINE B2 1 209 -7 6 1561 1236 68 0 0 chrX 127951063 127951226 -38699070 + (GAAA)n Simple_repeat Simple_repeat 4 166 0 6 1561 716 291 87 44 chrX 127951453 127951971 -38698325 + L1MB7 LINE L1 5630 6169 -15 6 1561 332 259 25 22 chrX 127952168 127952271 -38698025 - ORR1D2 LTR MaLR 0 378 258 6 1561 186 43 0 0 chrX 127952271 127952294 -38698002 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 6 1561 275 333 81 52 chrX 127952294 127952364 -38697932 - ORR1D2 LTR MaLR -108 270 200 6 1561 312 27 0 0 chrX 127952521 127952558 -38697738 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1561 380 260 41 0 chrX 127952563 127952686 -38697610 - Lx7 LINE L1 -11 7685 7558 6 1561 479 286 24 30 chrX 127952688 127952854 -38697442 - Lx7 LINE L1 -354 7342 7178 6 1561 254 211 92 0 chrX 127952876 127952952 -38697344 - ORR1D2 LTR MaLR -323 96 14 6 1561 23 0 0 0 chrX 127953051 127953074 -38697222 + AT_rich Low_complexity Low_complexity 1 23 0 6 1561 2947 92 51 9 chrX 127953134 127953582 -38696714 - Lx3_Mus LINE L1 0 7009 6543 6 1561 1799 66 4 0 chrX 127953582 127953809 -38696487 + Lx3_Mus LINE L1 6330 6557 -452 6 1561 11301 158 16 8 chrX 127954078 127956111 -38694185 + Lx3_Mus LINE L1 3851 5905 -1104 6 1561 2912 183 31 6 chrX 127956111 127956656 -38693640 + Lx LINE L1 6096 6654 0 6 1561 1631 194 31 0 chrX 127956656 127956670 -38693626 + Lx3_Mus LINE L1 5906 5919 -1090 6 1561 1233 48 0 0 chrX 127957943 127958090 -38692206 - B1_Mus2 SINE Alu 0 147 1 6 1561 645 82 0 0 chrX 127958449 127958546 -38691750 + (TG)n Simple_repeat Simple_repeat 1 97 0 6 1561 1231 221 88 61 chrX 127958709 127959119 -38691177 - MTC LTR MaLR 0 421 1 6 1561 493 338 26 87 chrX 127959298 127959609 -38690687 - B4A SINE B4 0 292 1 6 1561 601 293 61 16 chrX 127959760 127960006 -38690290 + LTR37A LTR ERV1 2 258 -168 6 1561 868 273 20 70 chrX 127960560 127960859 -38689437 + RMER5 LTR ERV1 1 284 -250 6 1561 317 253 71 12 chrX 127960912 127960996 -38689300 + RMER5 LTR ERV1 429 517 -17 6 1561 369 0 0 0 chrX 127960996 127961037 -38689259 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1561 5071 70 6 6 chrX 127961155 127961825 -38688471 + L1Md_F2 LINE L1 5911 6580 -2 6 1561 185 222 138 69 chrX 127963235 127963322 -38686974 - MIR SINE MIR -56 206 114 6 1561 21 0 0 0 chrX 127963446 127963467 -38686829 + AT_rich Low_complexity Low_complexity 1 21 0 6 1561 270 193 0 17 chrX 127963616 127963674 -38686622 - MARNA DNA Mariner -345 241 185 6 1561 411 309 31 8 chrX 127963935 127964062 -38686234 + MER3 DNA MER1_type 1 130 -79 6 1561 180 0 0 0 chrX 127964477 127964497 -38685799 + (A)n Simple_repeat Simple_repeat 1 20 0 6 1561 546 305 87 23 chrX 127964788 127965053 -38685243 - B4A SINE B4 -10 282 1 6 1561 631 299 114 10 chrX 127965238 127965535 -38684761 + L1MCa LINE L1 3 330 -6178 6 1561 984 255 9 0 chrX 127965646 127965858 -38684438 + B3 SINE B2 1 214 -2 6 1561 423 218 5 113 chrX 127965874 127966041 -38684255 + L1MC1 LINE L1 5144 5297 -849 6 1561 602 272 0 13 chrX 127966041 127966190 -38684106 + B1_Mm SINE Alu 1 147 0 6 1561 1706 263 214 20 chrX 127966190 127966900 -38683396 + L1MC1 LINE L1 5298 6148 -185 6 1561 402 21 0 0 chrX 127966954 127967001 -38683295 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 6 1561 1901 158 58 12 chrX 127967042 127967388 -38682908 + ORR1B2 LTR MaLR 1 362 -5 6 1561 344 276 13 0 chrX 127967399 127967475 -38682821 - ID4_ SINE ID 0 83 7 6 1561 280 328 9 47 chrX 127967742 127967883 -38682413 - MER5A DNA MER1_type -44 145 10 6 1561 2120 194 182 17 chrX 127969818 127970410 -38679886 + RMER6C LTR ERVK 1 690 0 6 1561 4807 139 29 40 chrX 127971271 127972176 -38678120 - RMER17A2 LTR ERVK -11 895 1 6 1561 893 257 37 52 chrX 127972377 127972648 -38677648 - RLTR19-int LTR ERVK -1757 4380 4114 6 1561 409 181 13 3 chrX 127972681 127972781 -38677515 - RLTR19-int LTR ERVK -2028 4109 4034 6 1561 397 222 102 53 chrX 127972801 127973007 -38677289 - RLTR19-int LTR ERVK -2175 3962 3863 6 1561 575 284 147 22 chrX 127973196 127973697 -38676599 - RLTR19-int LTR ERVK -3245 2892 2329 6 1561 23 54 0 0 chrX 127973815 127973852 -38676444 + AT_rich Low_complexity Low_complexity 1 37 0 6 1561 1317 246 126 30 chrX 127973863 127974406 -38675890 - RLTR26 LTR ERVK 0 642 11 6 1561 1882 253 154 67 chrX 127974765 127974978 -38675318 - MTC-int LTR MaLR -59 1199 1018 6 1561 513 121 0 0 chrX 127974978 127975061 -38675235 + (TA)n Simple_repeat Simple_repeat 1 83 0 6 1561 1882 253 154 67 chrX 127975061 127975517 -38674779 - MTC-int LTR MaLR -241 1017 472 6 1561 382 195 0 22 chrX 127975525 127975614 -38674682 - RLTR19-int LTR ERVK -4972 1165 1079 6 1561 280 236 0 0 chrX 127975956 127976028 -38674268 - RLTR19-int LTR ERVK -5170 967 896 6 1561 743 229 124 5 chrX 127976116 127976318 -38673978 - RLTR42-int LTR ERVK -4192 1330 1105 6 1561 441 122 0 0 chrX 127977254 127977328 -38672968 + (GA)n Simple_repeat Simple_repeat 2 75 0 6 1561 2292 214 79 24 chrX 127977423 127977968 -38672328 + RMER15 LTR ERVL 1 575 0 6 1561 216 0 0 0 chrX 127978008 127978032 -38672264 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1561 1812 162 66 3 chrX 127978078 127978425 -38671871 - RMER6B LTR ERVK -5 456 88 6 1561 596 162 30 0 chrX 127978660 127978759 -38671537 - RMER6B LTR ERVK -359 102 1 6 1561 756 292 116 38 chrX 127979697 127980017 -38670279 + MLT2C1 LTR ERVL 13 357 -40 7 1561 708 330 67 40 chrX 127980055 127980383 -38669913 + MER2 DNA MER2_type 2 338 -7 7 1561 40 59 0 0 chrX 127980643 127980711 -38669585 + AT_rich Low_complexity Low_complexity 1 68 0 7 1561 400 319 64 29 chrX 127980880 127981161 -38669135 - L1MA6 LINE L1 -32 6268 5978 7 1561 371 371 44 44 chrX 127981366 127981617 -38668679 - L1ME2 LINE L1 -5 6159 5909 7 1561 198 327 0 0 chrX 127981663 127981718 -38668578 - MIRm SINE MIR 0 276 222 7 1561 21 57 0 0 chrX 127981912 127981947 -38668349 + AT_rich Low_complexity Low_complexity 1 35 0 7 1561 508 317 148 40 chrX 127982437 127982762 -38667534 - L2 LINE L2 -465 2954 2595 7 1561 25 0 0 0 chrX 127983110 127983135 -38667161 + AT_rich Low_complexity Low_complexity 1 25 0 7 1561 503 303 98 31 chrX 127983272 127983497 -38666799 - L2 LINE L2 -866 2553 2314 7 1561 642 248 24 0 chrX 127983528 127983653 -38666643 - B1_Mur2 SINE Alu -12 137 10 7 1561 206 200 0 43 chrX 127983712 127983759 -38666537 + GA-rich Low_complexity Low_complexity 3 47 0 7 1561 662 259 20 23 chrX 127983790 127983987 -38666309 + B3A SINE B2 22 215 -1 7 1561 1315 75 0 6 chrX 127983992 127984167 -38666129 + B2_Mm2 SINE B2 2 175 -20 7 1561 710 311 140 47 chrX 127984903 127985475 -38664821 + Lx9 LINE L1 6850 7472 -1 7 1561 316 325 0 0 chrX 127985931 127986014 -38664282 + ID4_ SINE ID 1 83 0 7 1561 228 312 60 60 chrX 127986623 127986756 -38663540 - L2b LINE L2 -219 3156 3024 7 1561 260 227 0 26 chrX 127986862 127986939 -38663357 + L1MEd LINE L1 53 127 -5992 7 1561 433 325 52 36 chrX 127986954 127987206 -38663090 - LTR37B LTR ERV1 0 468 213 7 1561 1885 195 27 39 chrX 127987364 127987774 -38662522 - MTD LTR MaLR -14 405 1 7 1561 247 287 29 19 chrX 127987774 127987863 -38662433 - LTR37B LTR ERV1 -370 98 9 7 1561 239 146 122 0 chrX 127987902 127987943 -38662353 + L2a LINE L2 3312 3357 -69 7 1561 2865 91 8 5 chrX 127987967 127988364 -38661932 + MTB LTR MaLR 3 400 0 7 1561 262 167 0 0 chrX 127988414 127988456 -38661840 - ID4 SINE ID -38 45 4 7 1561 422 331 20 33 chrX 127989168 127989318 -38660978 + B1F SINE Alu 1 148 -1 7 1561 23 0 0 0 chrX 127989586 127989609 -38660687 + AT_rich Low_complexity Low_complexity 1 23 0 7 1561 180 0 0 0 chrX 127990699 127990719 -38659577 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1561 288 28 0 0 chrX 127990958 127990994 -38659302 + ORR1A2 LTR MaLR 1 36 -310 7 1561 566 52 0 105 chrX 127990992 127991078 -38659218 + ORR1A2 LTR MaLR 244 320 -7 7 1561 662 306 55 21 chrX 127991169 127991406 -38658890 + MamRep605 Unknown Unknown 396 640 -236 7 1561 740 309 22 13 chrX 127991606 127991917 -38658379 + L1MA9 LINE L1 5867 6180 -132 7 1561 22 0 0 0 chrX 127992110 127992132 -38658164 + AT_rich Low_complexity Low_complexity 1 22 0 7 1561 1033 164 21 64 chrX 127992225 127992460 -38657836 - MTB_Mm LTR MaLR 0 421 197 7 1561 651 48 0 0 chrX 127992460 127992543 -38657753 + (TTCC)n Simple_repeat Simple_repeat 3 85 0 7 1561 8401 177 21 10 chrX 127992558 127994813 -38655483 - Lx LINE L1 -7 6647 4364 7 1561 2171 105 3 13 chrX 127994814 127995132 -38655164 - ORR1A2 LTR MaLR -8 319 5 7 1561 2002 124 27 0 chrX 127995145 127995475 -38654821 - Lx LINE L1 -1515 4371 4033 7 1561 1150 132 21 21 chrX 127995475 127995668 -38654628 - MTB_Mm LTR MaLR -212 195 3 7 1561 226 121 33 49 chrX 127995739 127995800 -38654496 + (TA)n Simple_repeat Simple_repeat 2 61 0 7 1561 373 297 51 19 chrX 127995913 127996071 -38654225 + MER3 DNA MER1_type 47 209 0 7 1561 21 0 0 0 chrX 127996361 127996382 -38653914 + AT_rich Low_complexity Low_complexity 1 21 0 7 1561 711 236 184 38 chrX 127997224 127997537 -38652759 - MTC LTR MaLR -3 416 46 7 1561 1184 92 58 0 chrX 127997537 127997711 -38652585 + B2_Mm2 SINE B2 2 185 -10 7 1561 711 281 107 73 chrX 127997711 127997757 -38652539 - MTC LTR MaLR -376 45 15 7 1561 224 278 88 11 chrX 127997792 127997883 -38652413 + MIR SINE MIR 3 100 -162 7 1561 326 312 76 28 chrX 127999787 127999932 -38650364 - MER92B LTR ERV1 -290 346 195 7 1561 215 224 0 0 chrX 128000019 128000068 -38650228 + A-rich Low_complexity Low_complexity 4 52 0 1 1561 546 43 0 0 chrX 128000190 128000259 -38650037 + (TG)n Simple_repeat Simple_repeat 1 69 0 2 1561 430 263 97 81 chrX 128000301 128000487 -38649809 - B4 SINE B4 0 292 104 3 1561 234 255 64 152 chrX 128000377 128000502 -38649794 - PB1 SINE Alu -8 119 6 4 1561 4276 68 34 1 chrX 128000502 128001199 -38649097 + Lx3A LINE L1 5253 5967 -1014 5 1561 1200 71 47 6 chrX 128001230 128001400 -38648896 - L1Md_F2 LINE L1 -11 6571 6395 6 1561 2562 202 28 10 chrX 128001573 128002297 -38647999 - Lx7 LINE L1 -1739 5957 5226 7 1561 688 282 28 18 chrX 128002301 128002518 -38647778 - ORR1D1 LTR MaLR -1 373 155 8 1561 192 97 0 0 chrX 128002529 128002560 -38647736 + (TGAG)n Simple_repeat Simple_repeat 2 32 0 9 1561 554 271 52 8 chrX 128002561 128002695 -38647601 - ORR1D1 LTR MaLR -193 181 42 8 1561 189 0 0 0 chrX 128003190 128003211 -38647085 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1561 1251 118 0 0 chrX 128003215 128003393 -38646903 - B2_Mm2 SINE B2 -16 179 2 1 1561 507 278 20 149 chrX 128003587 128003829 -38646467 + MTE2a LTR MaLR 1 231 -188 1 1561 36050 18 3 7 chrX 128003829 128009226 -38641070 + L1Md_A LINE L1 215 5586 -297 1 1561 8739 16 1 0 chrX 128009226 128010221 -38640075 + L1Md_A LINE L1 5587 6582 0 1 1561 672 281 45 77 chrX 128010222 128010442 -38639854 + MTE2a LTR MaLR 167 379 0 1 1561 822 192 165 5 chrX 128011139 128011333 -38638963 - URR1B DNA MER1_type 0 225 1 1 1561 225 0 0 0 chrX 128011474 128011499 -38638797 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1561 826 264 61 45 chrX 128011610 128011920 -38638376 - RLTR15 LTR ERVK -44 315 1 1 1561 495 281 148 0 chrX 128012024 128012159 -38638137 - B3A SINE B2 -43 155 1 1 1561 927 323 58 11 chrX 128012414 128012774 -38637522 + MTD LTR MaLR 43 419 0 1 1561 333 118 0 0 chrX 128013996 128014047 -38636249 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 1 1561 632 248 189 4 chrX 128014120 128014363 -38635933 - RMER5 LTR ERV1 -9 525 238 2 1561 290 310 88 51 chrX 128014827 128015085 -38635211 + MTEa LTR MaLR 91 364 -15 2 1561 757 321 58 17 chrX 128015146 128015491 -38634805 - MLT1A0 LTR MaLR -6 359 1 2 1561 364 391 9 38 chrX 128015509 128015719 -38634577 + MLT1N2 LTR MaLR 359 562 0 2 1561 390 204 0 0 chrX 128016087 128016175 -38634121 + CT-rich Low_complexity Low_complexity 2 89 0 2 1561 327 181 0 0 chrX 128016194 128016266 -38634030 + T-rich Low_complexity Low_complexity 1 72 0 2 1561 806 97 18 143 chrX 128016279 128016366 -38633930 - B1_Mus1 SINE Alu 0 148 66 2 1561 321 23 0 0 chrX 128016366 128016409 -38633887 + L1_Mus2 LINE L1 6520 6562 -4 2 1561 806 97 18 143 chrX 128016409 128016489 -38633807 - B1_Mus1 SINE Alu -83 65 2 2 1561 2302 220 88 106 chrX 128016546 128017495 -38632801 - RMER17B LTR ERVK -64 894 3 2 1561 269 274 176 19 chrX 128017495 128017590 -38632706 - B1F SINE Alu -34 115 4 2 1561 704 377 18 18 chrX 128017744 128018308 -38631988 + ERVL-E-int LTR ERVL 3373 3936 -1731 3 1561 551 142 22 7 chrX 128018363 128018498 -38631798 + (TA)n Simple_repeat Simple_repeat 1 137 0 3 1561 522 61 0 0 chrX 128018498 128018564 -38631732 - B1_Mus1 SINE Alu -81 67 2 3 1561 363 219 0 14 chrX 128018499 128018573 -38631723 - B4A SINE B4 -142 150 78 3 1561 21 0 0 0 chrX 128019921 128019942 -38630354 + AT_rich Low_complexity Low_complexity 1 21 0 3 1561 375 350 132 31 chrX 128020521 128020748 -38629548 + B4A SINE B4 8 257 -35 3 1561 456 19 0 0 chrX 128020892 128020945 -38629351 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1561 495 0 0 0 chrX 128020945 128020999 -38629297 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 1561 315 0 0 0 chrX 128021007 128021042 -38629254 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1561 646 294 52 38 chrX 128021055 128021267 -38629029 + MTD LTR MaLR 205 419 0 3 1561 275 0 29 0 chrX 128021291 128021326 -38628970 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1561 335 301 0 21 chrX 128021654 128021749 -38628547 - RMER15 LTR ERVL -128 447 355 4 1561 459 237 70 56 chrX 128021812 128021955 -38628341 - RMER15 LTR ERVL -416 159 15 4 1561 23 0 0 0 chrX 128023232 128023255 -38627041 + AT_rich Low_complexity Low_complexity 1 23 0 4 1561 21 0 0 0 chrX 128023314 128023335 -38626961 + AT_rich Low_complexity Low_complexity 1 21 0 4 1561 21 0 0 0 chrX 128024323 128024344 -38625952 + AT_rich Low_complexity Low_complexity 1 21 0 4 1561 453 36 0 0 chrX 128024555 128024610 -38625686 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1561 225 0 0 0 chrX 128024610 128024634 -38625662 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 1561 933 79 0 0 chrX 128024762 128024889 -38625407 + (TTTC)n Simple_repeat Simple_repeat 4 130 0 4 1561 26 0 0 0 chrX 128026845 128026871 -38623425 + AT_rich Low_complexity Low_complexity 1 26 0 4 1561 276 307 88 25 chrX 128027967 128028167 -38622129 + B4 SINE B4 2 270 -22 4 1561 423 106 0 0 chrX 128028167 128028233 -38622063 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 1561 276 326 124 28 chrX 128028233 128028254 -38622042 + B4 SINE B4 271 291 -1 4 1561 2113 234 116 92 chrX 128028259 128029179 -38621117 + RMER17B LTR ERVK 1 910 -48 5 1561 333 0 0 0 chrX 128029199 128029236 -38621060 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1561 708 182 194 46 chrX 128029360 128029556 -38620740 - URR1B DNA MER1_type 0 225 1 5 1561 4912 97 1 3 chrX 128029689 128030384 -38619912 + L1_Mus3 LINE L1 5944 6637 -1 5 1561 514 335 33 7 chrX 128030944 128031097 -38619199 + RSINE1 SINE B4 3 159 -6 5 1561 240 315 0 0 chrX 128031198 128031252 -38619044 + L2a LINE L2 3354 3407 -19 5 1561 23343 26 0 0 chrX 128032124 128035024 -38615272 + L1Md_T LINE L1 2688 5586 -297 5 1561 8483 32 0 0 chrX 128035024 128036020 -38614276 + L1Md_T LINE L1 5587 6582 0 5 1561 209 222 49 0 chrX 128036909 128036990 -38613306 + (TTTA)n Simple_repeat Simple_repeat 3 87 0 5 1561 21 0 0 0 chrX 128037643 128037664 -38612632 + GC_rich Low_complexity Low_complexity 1 21 0 5 1561 558 346 40 11 chrX 128038139 128038519 -38611777 + Lx9 LINE L1 7130 7520 -124 6 1561 21 57 0 0 chrX 128038605 128038640 -38611656 + AT_rich Low_complexity Low_complexity 1 35 0 6 1561 435 38 0 0 chrX 128038921 128038974 -38611322 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1561 195 69 0 0 chrX 128039804 128039833 -38610463 + (A)n Simple_repeat Simple_repeat 1 29 0 6 1561 196 85 0 60 chrX 128040264 128040314 -38609982 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 6 1561 661 294 6 12 chrX 128041192 128041354 -38608942 - RSINE1 SINE B4 -2 163 3 6 1561 239 264 83 52 chrX 128041456 128041552 -38608744 + MLT1K LTR MaLR 382 480 -115 6 1561 801 327 24 38 chrX 128041644 128041984 -38608312 + MER58B DNA MER1_type 7 341 0 6 1561 3375 38 2 0 chrX 128043045 128043440 -38606856 - MTA_Mm LTR MaLR 0 396 1 6 1561 361 276 79 24 chrX 128043707 128043833 -38606463 - MER99 DNA hAT? -425 406 274 6 1561 1164 267 48 10 chrX 128043899 128044190 -38606106 - ORR1D2 LTR MaLR -12 358 57 7 1561 307 281 73 7 chrX 128044230 128044366 -38605930 - MER99 DNA hAT? -654 177 33 6 1561 240 0 75 0 chrX 128045578 128045618 -38604678 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 7 1561 1978 30 0 0 chrX 128046750 128046987 -38603309 + L1Md_F2 LINE L1 5350 5586 -297 7 1561 7571 75 0 7 chrX 128046987 128047986 -38602310 + L1Md_F2 LINE L1 5587 6578 -4 7 1561 438 323 76 15 chrX 128049364 128049562 -38600734 + MTD LTR MaLR 2 211 -210 7 1561 1543 196 30 14 chrX 128049572 128049934 -38600362 + Lx4B LINE L1 6670 7037 -21 7 1561 1337 87 16 11 chrX 128049953 128050139 -38600157 + B2_Mm2 SINE B2 1 187 -8 7 1561 457 205 223 23 chrX 128050266 128050441 -38599855 + MTD LTR MaLR 196 405 -14 7 1561 198 0 0 0 chrX 128050443 128050465 -38599831 + (CAAA)n Simple_repeat Simple_repeat 4 25 0 7 1561 781 280 21 109 chrX 128050472 128051069 -38599227 + MTD-int LTR MaLR 1 628 -630 7 1561 1473 269 52 22 chrX 128051085 128051530 -38598766 + RMER20A LTR ERVK 21 478 -38 7 1561 724 308 31 99 chrX 128051555 128051908 -38598388 + MTD-int LTR MaLR 647 975 -283 7 1561 859 182 14 0 chrX 128051905 128052048 -38598248 + B1_Mur4 SINE Alu 6 150 0 7 1561 318 106 0 0 chrX 128052067 128052114 -38598182 + (GGAGAA)n Simple_repeat Simple_repeat 3 49 0 7 1561 183 42 0 0 chrX 128052138 128052162 -38598134 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 8 1561 630 218 202 12 chrX 128052167 128052409 -38597887 + MTD-int LTR MaLR 960 1247 -11 7 1561 845 291 48 20 chrX 128052437 128052689 -38597607 + MTD LTR MaLR 13 271 -148 7 1561 715 246 38 5 chrX 128053369 128053553 -38596743 + Lx5 LINE L1 6858 7047 -3 8 1561 470 320 157 40 chrX 128053844 128054169 -38596127 - MLT1A0 LTR MaLR 0 365 3 8 1561 267 31 0 0 chrX 128054851 128054883 -38595413 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 1561 528 223 0 0 chrX 128054885 128054979 -38595317 - RSINE1 SINE B4 -24 141 48 8 1561 435 340 86 16 chrX 128054974 128055231 -38595065 + MT2A LTR ERVL 257 531 -2 8 1561 1420 130 22 9 chrX 128056563 128056795 -38593501 - Lx2 LINE L1 0 6997 6763 8 195 4404 144 40 13 chrX 128056782 128057542 -38592754 - Lx2 LINE L1 -352 6645 5866 8 1562 331 102 0 0 chrX 128057542 128057601 -38592695 - L1_Mus3 LINE L1 -5 6633 6575 8 1562 25293 133 22 18 chrX 128057604 128062416 -38587880 - L1Md_F LINE L1 -619 5264 416 8 1562 1891 88 33 0 chrX 128062421 128062693 -38587603 - Lx2 LINE L1 -1119 5878 5598 8 1562 7838 115 11 10 chrX 128062739 128062753 -38587543 - Lx3A LINE L1 0 6981 6968 9 1562 1226 83 0 11 chrX 128062753 128062935 -38587361 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 9 1562 7838 115 11 10 chrX 128062935 128063420 -38586876 - Lx3A LINE L1 -14 6967 6489 9 1562 3479 10 5 2 chrX 128063420 128063815 -38586481 + MTA_Mm LTR MaLR 1 396 0 9 1562 9247 26 5 1 chrX 128063815 128064909 -38585387 + MTA_Mm-int LTR MaLR 1 1098 0 9 1562 3444 13 5 2 chrX 128064909 128065304 -38584992 + MTA_Mm LTR MaLR 1 396 0 9 1562 7838 115 11 10 chrX 128065304 128066026 -38584270 - Lx3A LINE L1 -493 6488 5758 9 1562 5031 112 2 24 chrX 128066026 128066390 -38583906 + L1_Mur1 LINE L1 5001 5355 -531 9 1562 3576 74 0 32 chrX 128066390 128066894 -38583402 + L1Md_F2 LINE L1 6095 6582 0 9 1562 5031 112 2 24 chrX 128066894 128067314 -38582982 + L1_Mur1 LINE L1 5356 5768 -118 9 1562 300 232 73 100 chrX 128067331 128067441 -38582855 + MLT1C LTR MaLR 6 112 -355 9 1562 486 316 67 46 chrX 128067453 128067735 -38582561 + MLT1C LTR MaLR 162 449 -18 9 1562 1225 216 158 6 chrX 128068212 128068529 -38581767 + ORR1B2 LTR MaLR 1 365 -2 9 1562 938 255 45 59 chrX 128068680 128069037 -38581259 - Charlie7 DNA MER1_type -143 2469 2118 9 1562 381 316 54 19 chrX 128069037 128069276 -38581020 - MTC LTR MaLR 0 379 49 9 1562 1556 327 89 34 chrX 128069332 128069485 -38580811 - Lx9 LINE L1 -3 7470 7297 9 1562 366 23 0 0 chrX 128069485 128069528 -38580768 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1562 2108 307 40 22 chrX 128069528 128070381 -38579915 - Lx9 LINE L1 -268 7376 6409 9 1562 26 30 0 0 chrX 128070390 128070423 -38579873 + AT_rich Low_complexity Low_complexity 1 33 0 1 1562 365 311 109 27 chrX 128071045 128071458 -38578838 - L1MC4 LINE L1 -812 7230 6784 1 1562 782 280 5 21 chrX 128071621 128071807 -38578489 - B3A SINE B2 0 198 16 1 1562 494 286 104 0 chrX 128071824 128072065 -38578231 - L1MB2 LINE L1 -54 6117 5852 1 1562 225 324 41 41 chrX 128072106 128072251 -38578045 - L1MB2 LINE L1 -418 5771 5627 1 1562 1510 244 52 3 chrX 128072486 128072832 -38577464 - ORR1D1 LTR MaLR -2 372 10 1 1562 225 0 0 0 chrX 128072832 128072857 -38577439 + (TCTA)n Simple_repeat Simple_repeat 1 25 0 1 1562 369 0 0 0 chrX 128072857 128072897 -38577399 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1562 382 236 1 1 chrX 128073037 128073116 -38577180 - RSINE1 SINE B4 -84 81 2 1 1562 200 328 0 0 chrX 128073123 128073181 -38577115 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 1562 25 75 0 0 chrX 128073268 128073321 -38576975 + AT_rich Low_complexity Low_complexity 1 53 0 1 1562 480 284 72 40 chrX 128073440 128073692 -38576604 - L1MC4 LINE L1 -293 5831 5566 1 1562 627 149 0 0 chrX 128073772 128073879 -38576417 + (CA)n Simple_repeat Simple_repeat 2 108 0 1 1562 471 338 69 61 chrX 128073990 128074466 -38575830 - Charlie7 DNA MER1_type -672 1940 1461 9 1562 585 42 0 0 chrX 128074475 128074547 -38575749 + (TA)n Simple_repeat Simple_repeat 1 72 0 1 1562 2997 148 10 18 chrX 128074547 128075056 -38575240 - Lx2B LINE L1 -17 6983 6479 1 1562 3946 161 19 11 chrX 128075059 128075778 -38574518 - Lx2B LINE L1 -734 6266 5539 1 1562 444 68 0 0 chrX 128075766 128075825 -38574471 - L1_Mm LINE L1 -444 5439 5381 1 1562 23 33 0 0 chrX 128075845 128075875 -38574421 + AT_rich Low_complexity Low_complexity 1 30 0 1 1562 8404 135 30 8 chrX 128075884 128078107 -38572189 - L1Md_F LINE L1 -3389 2494 222 1 1562 1436 272 79 8 chrX 128078145 128078523 -38571773 - MTD LTR MaLR -2 417 13 1 1562 1455 264 94 39 chrX 128078718 128079462 -38570834 - L1M4 LINE L1 -1158 4988 4204 1 1562 1154 62 7 0 chrX 128079956 128080101 -38570195 + B1_Mus2 SINE Alu 1 146 -1 1 1562 187 394 43 0 chrX 128081921 128082015 -38568281 - MIRc SINE MIR -150 118 21 1 1562 25 75 0 0 chrX 128082796 128082849 -38567447 + AT_rich Low_complexity Low_complexity 1 53 0 1 1562 499 254 0 21 chrX 128083858 128083999 -38566297 - Lx6 LINE L1 -12 7448 7311 1 1562 1196 258 66 53 chrX 128084177 128084557 -38565739 - MTD LTR MaLR -12 407 23 1 1562 23 0 0 0 chrX 128085488 128085511 -38564785 + AT_rich Low_complexity Low_complexity 1 23 0 1 1562 408 293 143 6 chrX 128085512 128085694 -38564602 - B3 SINE B2 -5 211 5 1 1562 421 258 129 0 chrX 128085801 128085894 -38564402 + RSINE1 SINE B4 37 141 -24 1 1562 558 29 0 0 chrX 128085894 128085962 -38564334 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 1562 662 279 7 0 chrX 128086473 128086609 -38563687 + ID_B1 SINE B4 79 215 -9 1 1562 324 333 116 12 chrX 128086629 128086802 -38563494 - MLT1A0 LTR MaLR -63 302 112 1 1562 1281 254 80 31 chrX 128086876 128087262 -38563034 + MTD LTR MaLR 1 405 -14 1 1562 371 330 19 10 chrX 128087737 128087945 -38562351 + Lx8 LINE L1 2174 2383 -3760 1 1562 21 82 0 0 chrX 128088240 128088289 -38562007 + AT_rich Low_complexity Low_complexity 1 49 0 1 1562 674 280 157 0 chrX 128088383 128088683 -38561613 + Lx8 LINE L1 4001 4347 -1796 1 1562 518 258 134 16 chrX 128088684 128088938 -38561358 + ORR1E LTR MaLR 44 370 0 1 1562 853 275 139 27 chrX 128089052 128089727 -38560569 + Lx8 LINE L1 5125 5879 -1594 1 1562 22 35 0 0 chrX 128090057 128090086 -38560210 + AT_rich Low_complexity Low_complexity 1 29 0 1 1562 733 114 27 23 chrX 128090916 128091183 -38559113 + (TA)n Simple_repeat Simple_repeat 1 268 0 1 1562 875 326 76 54 chrX 128091208 128091669 -38558627 - Lx8 LINE L1 -696 6777 6304 1 1562 991 109 0 0 chrX 128091669 128091806 -38558490 + B1_Mus1 SINE Alu 3 139 -9 1 1562 219 69 0 0 chrX 128091806 128091835 -38558461 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 1562 875 326 76 54 chrX 128091835 128091949 -38558347 - Lx8 LINE L1 -1170 6303 6189 1 1562 1970 237 116 12 chrX 128092179 128092670 -38557626 - Lx5 LINE L1 -24 7026 6485 1 1562 3759 35 7 0 chrX 128093564 128094018 -38556278 - L1Md_F2 LINE L1 0 6582 6126 1 1562 279 0 0 0 chrX 128094352 128094383 -38555913 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1562 299 280 12 47 chrX 128094517 128094603 -38555693 - B1_Mus1 SINE Alu -55 93 11 1 1562 274 309 20 41 chrX 128094611 128094709 -38555587 + MIRb SINE MIR 104 199 -69 1 1562 966 343 84 22 chrX 128094753 128095806 -38554490 + L1_Mur3 LINE L1 1604 2722 -3158 1 1562 1094 309 81 10 chrX 128096040 128096657 -38553639 + L1M2 LINE L1 3774 4434 -1709 1 1562 183 42 0 0 chrX 128096912 128096936 -38553360 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1 1562 720 315 21 24 chrX 128096971 128097309 -38552987 + L1_Mur3 LINE L1 4491 4827 -1053 1 1562 551 310 68 48 chrX 128097334 128097541 -38552755 + B3 SINE B2 6 216 0 1 1562 195 69 0 0 chrX 128097552 128097581 -38552715 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1562 745 338 62 26 chrX 128097587 128098200 -38552096 + L1_Rod LINE L1 4800 5434 -413 1 1562 1203 220 79 0 chrX 128098218 128098459 -38551837 - Lx5 LINE L1 -5 7045 6786 1 1562 3597 134 33 2 chrX 128098483 128099089 -38551207 - Lx2 LINE L1 -697 6300 5676 1 1562 698 314 119 46 chrX 128099194 128099851 -38550445 - L1MEc LINE L1 -5578 822 118 1 1562 198 0 0 0 chrX 128101178 128101200 -38549096 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1 1562 289 307 76 35 chrX 128101997 128102142 -38548154 + MER5A1 DNA MER1_type 7 157 -9 1 1562 261 330 26 18 chrX 128102383 128102497 -38547799 + Tigger5 DNA MER2_type 2291 2405 -1 1 1562 207 0 0 0 chrX 128102522 128102545 -38547751 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 1562 493 167 39 10 chrX 128103067 128103170 -38547126 - Lx9 LINE L1 -602 7042 6937 1 1562 1713 211 55 12 chrX 128103177 128103665 -38546631 + Lx9 LINE L1 7040 7635 -9 1 1562 354 314 65 13 chrX 128103721 128103876 -38546420 + MIR SINE MIR 59 221 -41 1 1562 354 138 0 0 chrX 128104010 128104068 -38546228 + (TCCC)n Simple_repeat Simple_repeat 4 61 0 1 1562 669 25 0 0 chrX 128104478 128104557 -38545739 + (TA)n Simple_repeat Simple_repeat 2 80 0 1 1562 213 261 43 14 chrX 128106211 128106281 -38544015 + MIR SINE MIR 65 136 -72 1 1562 21 0 0 0 chrX 128107355 128107376 -38542920 + AT_rich Low_complexity Low_complexity 1 21 0 1 1562 336 48 0 0 chrX 128107674 128107716 -38542580 + (TAGA)n Simple_repeat Simple_repeat 1 42 0 1 1562 2125 164 75 40 chrX 128107788 128108213 -38542083 + RMER20A LTR ERVK 1 440 -76 1 1562 717 88 0 0 chrX 128108242 128108344 -38541952 + (TTCC)n Simple_repeat Simple_repeat 3 104 0 1 1562 7922 126 38 30 chrX 128108425 128109915 -38540381 - Lx3C LINE L1 -7 6969 5469 1 1562 907 313 171 22 chrX 128109933 128110390 -38539906 - MT2A LTR ERVL -8 525 1 1 1562 466 296 24 16 chrX 128111599 128111726 -38538570 + B1F1 SINE Alu 13 140 -9 1 1562 435 345 130 30 chrX 128111732 128112070 -38538226 - L2 LINE L2 -938 2481 2110 1 1562 494 304 37 65 chrX 128112100 128112315 -38537981 - MER20 DNA MER1_type -5 214 6 1 1562 821 363 81 47 chrX 128112327 128113121 -38537175 - L2 LINE L2 -1360 2059 1239 1 1562 278 301 160 31 chrX 128113134 128113464 -38536832 - MLT1B LTR MaLR -5 369 1 1 1562 292 306 72 67 chrX 128113600 128113793 -38536503 + B3A SINE B2 5 198 0 1 1562 357 43 0 0 chrX 128113827 128113874 -38536422 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1562 229 370 20 0 chrX 128113947 128114047 -38536249 - L2 LINE L2 -2431 988 887 1 1562 263 378 62 28 chrX 128114219 128114396 -38535900 + LTR16A LTR ERVL 247 429 -22 1 1562 391 301 15 96 chrX 128114477 128114613 -38535683 + RSINE1 SINE B4 12 136 -29 1 1562 497 58 14 0 chrX 128114755 128114824 -38535472 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 1 1562 696 182 98 8 chrX 128114836 128114969 -38535327 - B2_Mm2 SINE B2 -49 146 2 1 1562 1725 222 159 53 chrX 128115009 128115182 -38535114 - Lx7 LINE L1 0 7696 7494 1 1562 279 0 0 0 chrX 128115182 128115213 -38535083 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1562 1725 222 159 53 chrX 128115213 128115680 -38534616 - Lx7 LINE L1 -203 7493 6988 1 1562 1765 158 8 47 chrX 128115681 128116046 -38534250 - RMER6C LTR ERVK 0 690 340 1 1562 307 232 15 15 chrX 128116061 128116137 -38534159 - MT2B LTR ERVL -345 239 164 1 1562 645 152 85 0 chrX 128116093 128116211 -38534085 - RMER6C LTR ERVK -562 128 1 1 1562 4046 244 14 13 chrX 128116213 128117166 -38533130 - Lx7 LINE L1 -471 7002 6047 1 1562 324 321 39 52 chrX 128117209 128117442 -38532854 + HERV16-int LTR ERVL 191 420 -4576 1 1562 246 255 75 47 chrX 128117600 128117707 -38532589 + L1MB8 LINE L1 5844 5953 -226 1 1562 251 295 26 26 chrX 128117774 128117889 -38532407 + L1MB8 LINE L1 6049 6163 -15 1 1562 773 317 32 20 chrX 128118418 128118666 -38531630 - MT2A LTR ERVL -72 461 211 1 1562 195 42 0 0 chrX 128118673 128118697 -38531599 + (CAG)n Simple_repeat Simple_repeat 3 26 0 1 1562 3773 72 35 8 chrX 128118767 128119313 -38530983 + L1Md_F2 LINE L1 6027 6582 0 1 1562 24 67 0 0 chrX 128119379 128119424 -38530872 + AT_rich Low_complexity Low_complexity 1 45 0 1 1562 261 319 99 71 chrX 128119431 128119684 -38530612 - Lx8 LINE L1 0 7473 7214 1 1562 378 147 0 0 chrX 128119684 128119752 -38530544 + (TC)n Simple_repeat Simple_repeat 1 68 0 1 1562 1016 324 177 17 chrX 128120074 128120767 -38529529 + MER21B LTR ERV1 49 852 -11 1 1562 317 344 41 105 chrX 128120864 128121036 -38529260 - LTR16A1 LTR ERVL -261 195 35 1 1562 263 377 19 9 chrX 128121447 128121554 -38528742 + LTR16E2 LTR ERVL 308 415 -153 1 1562 206 125 0 0 chrX 128122689 128122721 -38527575 + MIRm SINE MIR 236 267 -9 1 1562 264 356 108 18 chrX 128123222 128123388 -38526908 + MIRb SINE MIR 11 191 -77 1 1562 25 99 0 0 chrX 128123685 128123766 -38526530 + AT_rich Low_complexity Low_complexity 1 81 0 1 1562 277 183 48 0 chrX 128123810 128123914 -38526382 + (TA)n Simple_repeat Simple_repeat 1 109 0 1 1562 855 98 41 0 chrX 128124209 128124332 -38525964 - L1_Mus2 LINE L1 -266 6300 6173 1 1562 320 152 0 0 chrX 128124332 128124425 -38525871 + (CAGAGA)n Simple_repeat Simple_repeat 1 93 0 1 1562 278 98 19 19 chrX 128124431 128124485 -38525811 - L1_Mus3 LINE L1 -408 6230 6173 1 1562 1040 131 0 60 chrX 128124489 128125053 -38525243 + (CAGAGA)n Simple_repeat Simple_repeat 1 529 0 2 1562 1733 73 166 0 chrX 128125057 128125491 -38524805 - L1_Mus3 LINE L1 -437 6201 5696 2 1562 6128 54 34 4 chrX 128125588 128126372 -38523924 + RLTR13C2 LTR ERVK 1 808 0 2 1562 876 219 26 5 chrX 128126447 128126640 -38523656 - MTD LTR MaLR 0 419 223 2 1562 982 31 15 8 chrX 128126643 128126773 -38523523 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 2 1562 9825 93 16 22 chrX 128126803 128128359 -38521937 - Lx3_Mus LINE L1 -5 7004 5461 2 1562 518 217 168 19 chrX 128128360 128128515 -38521781 - MTD LTR MaLR -209 212 35 2 1562 180 0 0 0 chrX 128128516 128128536 -38521760 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1562 3070 72 5 10 chrX 128128542 128128951 -38521345 - L1_Mus1 LINE L1 0 6567 6161 2 1562 875 173 234 62 chrX 128129219 128129509 -38520787 - Lx7 LINE L1 0 7696 7357 2 1562 201 74 0 0 chrX 128129727 128129754 -38520542 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2 1562 183 402 44 66 chrX 128130700 128130836 -38519460 + L2b LINE L2 3238 3370 -5 2 1562 22 0 0 0 chrX 128130886 128130908 -38519388 + AT_rich Low_complexity Low_complexity 1 22 0 2 1562 293 0 27 0 chrX 128130925 128130962 -38519334 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 2 1562 1103 82 7 0 chrX 128130985 128131131 -38519165 - B1_Mus1 SINE Alu -1 147 1 2 1562 203 133 22 0 chrX 128131182 128131227 -38519069 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1562 286 361 80 44 chrX 128131466 128131692 -38518604 + L2b LINE L2 2333 2566 -853 2 1562 232 355 69 28 chrX 128132343 128132488 -38517808 + L2b LINE L2 3225 3375 0 2 1562 532 172 30 0 chrX 128132535 128132634 -38517662 - BC1_Mm scRNA scRNA -49 103 2 2 1562 320 297 206 67 chrX 128134113 128134322 -38515974 - ORR1E LTR MaLR -121 238 1 2 1562 448 246 63 118 chrX 128134322 128134473 -38515823 - MTE-int LTR MaLR -53 1527 1383 2 1562 4461 138 28 4 chrX 128134473 128135193 -38515103 - RMER19A LTR ERVK 0 737 1 2 1562 448 246 63 118 chrX 128135193 128135243 -38515053 - MTE-int LTR MaLR -198 1382 1338 2 1562 217 343 171 34 chrX 128135531 128135706 -38514590 - L2a LINE L2 -264 3162 2964 2 1562 192 77 0 0 chrX 128137846 128137872 -38512424 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1562 708 23 0 0 chrX 128137937 128138023 -38512273 + (TTTC)n Simple_repeat Simple_repeat 2 87 0 2 1562 204 175 50 0 chrX 128138028 128138068 -38512228 + CT-rich Low_complexity Low_complexity 1 42 0 2 1562 21 57 0 0 chrX 128138196 128138231 -38512065 + AT_rich Low_complexity Low_complexity 1 35 0 2 1562 594 281 14 94 chrX 128138231 128138443 -38511853 + B3A SINE B2 1 195 -3 2 1562 558 276 64 37 chrX 128138454 128138642 -38511654 - B3A SINE B2 -5 193 1 2 1562 810 300 39 8 chrX 128138717 128138976 -38511320 - Tigger5 DNA MER2_type -21 2385 2119 2 1562 268 260 39 13 chrX 128140542 128140620 -38509676 + L1MEe LINE L1 142 221 -4633 2 1562 504 325 24 28 chrX 128140721 128140933 -38509363 - Lx8 LINE L1 -877 6596 6386 2 1562 325 316 55 18 chrX 128141511 128141730 -38508566 - L1MD LINE L1 -3340 2806 2580 2 1562 1961 232 38 22 chrX 128142064 128142572 -38507724 + RLTR16 LTR ERVK 1 478 -27 2 1562 306 173 58 58 chrX 128142574 128142660 -38507636 + RLTR16 LTR ERVK 420 505 0 2 1562 413 275 60 16 chrX 128142759 128142975 -38507321 + L1_Mur3 LINE L1 452 628 -7100 2 1562 1505 200 46 59 chrX 128143050 128143758 -38506538 + L1_Mur3 LINE L1 818 1507 -4370 2 1562 29938 96 39 7 chrX 128143765 128148972 -38501324 + L1Md_F2 LINE L1 214 5585 -298 2 1562 7580 67 2 4 chrX 128148973 128149952 -38500344 + L1Md_F2 LINE L1 5587 6563 -19 2 1562 261 0 0 0 chrX 128149954 128149983 -38500313 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2 1562 9600 197 44 84 chrX 128149984 128150518 -38499778 + Lx6 LINE L1 1512 2055 -3825 2 1562 432 0 0 0 chrX 128150518 128150566 -38499730 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1562 9600 197 44 84 chrX 128150566 128152453 -38497843 + Lx6 LINE L1 2056 3971 -1909 2 1562 526 147 71 27 chrX 128152453 128152565 -38497731 - ORR1B1 LTR MaLR -1 393 277 2 1562 245 186 0 23 chrX 128152567 128152611 -38497685 - ORR1B1 LTR MaLR -328 46 4 2 1562 9600 197 44 84 chrX 128152611 128152861 -38497435 + Lx6 LINE L1 3972 4226 -1654 2 1562 7053 179 40 11 chrX 128152875 128155137 -38495159 - Lx5 LINE L1 -8 7042 4692 2 1562 4856 196 24 14 chrX 128155136 128156179 -38494117 + Lx6 LINE L1 4238 5290 -590 2 1562 2040 274 142 9 chrX 128156176 128156860 -38493436 + Lx6 LINE L1 6659 7433 -27 2 1562 3306 202 16 5 chrX 128156858 128157729 -38492567 + Lx6 LINE L1 5284 6166 -1294 2 1562 437 283 70 58 chrX 128158062 128158413 -38491883 - Lx6 LINE L1 -1193 6658 6546 2 1562 369 304 102 29 chrX 128158553 128158797 -38491499 - Lx6 LINE L1 -5285 1255 994 2 1562 549 0 0 0 chrX 128158809 128158870 -38491426 + (GA)n Simple_repeat Simple_repeat 2 62 0 2 1562 321 314 0 69 chrX 128159641 128159771 -38490525 + B3A SINE B2 2 122 -76 2 1562 615 204 40 20 chrX 128159783 128159933 -38490363 - RLTR25B LTR ERVK 0 1103 951 2 1562 3600 178 73 15 chrX 128159935 128160659 -38489637 - RLTR25B LTR ERVK -262 766 1 2 1562 21 36 0 0 chrX 128160738 128160766 -38489530 + AT_rich Low_complexity Low_complexity 1 28 0 2 1562 643 331 29 17 chrX 128160836 128161011 -38489285 + B4A SINE B4 11 187 -105 2 1562 263 267 50 25 chrX 128161215 128161334 -38488962 + L1ME4a LINE L1 5998 6119 -5 2 1562 1393 167 24 20 chrX 128161760 128162011 -38488285 + Lx4A LINE L1 6802 7053 -5 2 1562 721 162 0 8 chrX 128162937 128163055 -38487241 - B1_Mur3 SINE Alu 0 149 33 2 1562 1418 53 21 11 chrX 128163146 128163335 -38486961 + B2_Mm1a SINE B2 1 191 -2 2 1562 436 203 40 7 chrX 128163367 128163474 -38486822 + (TATATG)n Simple_repeat Simple_repeat 2 112 0 2 1562 198 0 0 0 chrX 128163474 128163496 -38486800 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 1562 436 203 40 7 chrX 128163496 128163537 -38486759 + (TATATG)n Simple_repeat Simple_repeat 1 43 0 2 1562 25 51 0 0 chrX 128163955 128163994 -38486302 + AT_rich Low_complexity Low_complexity 1 39 0 2 1562 374 108 15 0 chrX 128164244 128164309 -38485987 + (TA)n Simple_repeat Simple_repeat 1 66 0 2 1562 1187 258 68 18 chrX 128165042 128165437 -38484859 + MTD LTR MaLR 1 415 -4 2 1562 1674 174 9 0 chrX 128165437 128165754 -38484542 - Lx2 LINE L1 -430 5447 5128 2 1562 6191 149 18 8 chrX 128165745 128166920 -38483376 + Lx2 LINE L1 5458 6643 -354 2 1562 1321 139 0 30 chrX 128166920 128167150 -38483146 + Lx2 LINE L1 6775 6997 0 2 1562 592 261 0 7 chrX 128167303 128167442 -38482854 - B1_Mur1 SINE Alu -7 142 5 2 1562 334 333 159 25 chrX 128167777 128167940 -38482356 - B3A SINE B2 -11 187 3 2 1562 815 115 8 0 chrX 128168514 128168644 -38481652 + (GA)n Simple_repeat Simple_repeat 2 132 0 2 1562 4423 137 4 0 chrX 128168762 128169443 -38480853 - Lx LINE L1 0 6654 5971 2 1562 1937 221 115 30 chrX 128169683 128169818 -38480478 - Lx9 LINE L1 -1 7643 7505 2 1562 329 93 19 0 chrX 128169818 128169872 -38480424 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 1562 1937 221 115 30 chrX 128169872 128170172 -38480124 - Lx9 LINE L1 -140 7504 7163 2 1562 353 22 22 0 chrX 128170172 128170218 -38480078 + (CAAA)n Simple_repeat Simple_repeat 4 50 0 2 1562 1937 221 136 30 chrX 128170218 128170772 -38479524 - Lx9 LINE L1 -482 7162 6512 2 1562 1319 306 5 18 chrX 128171033 128171416 -38478880 - Lx6 LINE L1 -26 7434 7057 2 1562 784 174 0 0 chrX 128171830 128171962 -38478334 + Lx7 LINE L1 6836 6967 -729 2 1562 531 264 90 0 chrX 128174386 128174530 -38475766 + MER58A DNA MER1_type 7 163 -61 2 1562 25 31 0 0 chrX 128174793 128174825 -38475471 + AT_rich Low_complexity Low_complexity 1 32 0 2 1562 2404 199 15 15 chrX 128175001 128175541 -38474755 - L1_Mur3 LINE L1 -541 5339 4800 2 1562 7447 227 41 54 chrX 128175544 128176597 -38473699 + Lx7 LINE L1 5546 6570 -1126 2 1562 2403 75 3 0 chrX 128176597 128176915 -38473381 + L1_Mus2 LINE L1 6247 6565 -1 2 1562 7447 236 37 74 chrX 128176915 128178075 -38472221 + Lx7 LINE L1 6571 7680 -16 2 1562 21 71 0 0 chrX 128178824 128178866 -38471430 + AT_rich Low_complexity Low_complexity 1 42 0 2 1562 1019 313 158 46 chrX 128179000 128179633 -38470663 - MER44D DNA MER2_type -1 704 1 2 1562 267 152 0 0 chrX 128181243 128181289 -38469007 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1562 716 284 23 0 chrX 128181293 128181469 -38468827 - B3A SINE B2 -18 180 1 2 1562 311 292 52 59 chrX 128181474 128181627 -38468669 - Cheshire DNA MER1_type -458 1962 1811 2 1562 377 213 119 49 chrX 128181630 128181773 -38468523 - Cheshire DNA MER1_type -804 1616 1464 2 1562 379 232 0 24 chrX 128181830 128181914 -38468382 + MTD LTR MaLR 30 111 -308 2 1562 193 98 49 0 chrX 128181932 128181973 -38468323 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 1562 6646 122 27 0 chrX 128181996 128183225 -38467071 - Lx LINE L1 -81 6573 5305 2 1562 487 315 80 61 chrX 128183302 128183391 -38466905 - Cheshire DNA MER1_type -1121 1299 1202 2 1562 3360 38 2 0 chrX 128183391 128183786 -38466510 - MTA_Mm LTR MaLR 0 396 1 2 1562 487 315 80 61 chrX 128183786 128184007 -38466289 - Cheshire DNA MER1_type -1219 1201 983 2 1562 2355 91 196 0 chrX 128184108 128184505 -38465791 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1562 864 254 236 28 chrX 128184604 128184963 -38465333 - Cheshire DNA MER1_type -1491 929 496 2 1562 1215 249 142 0 chrX 128185111 128185441 -38464855 - MTD LTR MaLR -14 405 29 2 1562 392 278 41 0 chrX 128185660 128185757 -38464539 - B1F SINE Alu -29 120 20 2 1562 772 182 14 14 chrX 128185822 128185961 -38464335 - B1_Mur3 SINE Alu -1 148 10 2 1562 294 324 144 0 chrX 128186027 128186138 -38464158 - Arthur1B DNA Tip100 -1095 130 4 2 1562 623 330 30 5 chrX 128187472 128187673 -38462623 + B3 SINE B2 10 215 -1 2 1562 314 272 189 89 chrX 128187740 128187760 -38462536 - L1MB8 LINE L1 -170 6008 5991 2 1562 2523 183 132 24 chrX 128187760 128188383 -38461913 + RMER6C LTR ERVK 1 690 0 2 195 314 272 189 89 chrX 128188383 128188754 -38461542 - L1MB8 LINE L1 -188 5990 5578 2 1563 442 383 33 50 chrX 128188806 128189205 -38461091 + MLT1C LTR MaLR 66 457 -10 2 1563 380 302 39 51 chrX 128189210 128189465 -38460831 - L1M5 LINE L1 -600 5579 5328 2 1563 309 109 65 0 chrX 128189497 128189543 -38460753 - HAL1-3A_ME LINE L1 -844 2014 1966 2 1563 450 334 178 29 chrX 128189545 128190561 -38459735 - L1MD LINE L1 -867 5279 4096 2 1563 456 19 0 0 chrX 128191103 128191156 -38459140 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 1563 363 23 0 0 chrX 128191520 128191564 -38458732 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1563 1065 286 112 34 chrX 128191665 128191729 -38458567 - MTD LTR MaLR -6 413 351 2 1563 299 0 73 0 chrX 128191729 128191770 -38458526 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2 1563 1065 286 112 34 chrX 128191770 128192088 -38458208 - MTD LTR MaLR -69 350 1 2 1563 1365 281 153 59 chrX 128192088 128192890 -38457406 - MTD-int LTR MaLR 0 1258 296 2 1563 328 346 74 19 chrX 128192897 128193059 -38457237 - Lx8 LINE L1 -860 6613 6443 2 1563 718 333 46 8 chrX 128193118 128193381 -38456915 + Lx8 LINE L1 6214 6486 -987 2 1563 6516 79 16 0 chrX 128193627 128194510 -38455786 + L1Md_F2 LINE L1 4690 5586 -297 2 1563 7054 80 10 32 chrX 128194511 128195529 -38454767 + L1Md_F2 LINE L1 5588 6582 0 2 1563 26 0 0 0 chrX 128196283 128196309 -38453987 + AT_rich Low_complexity Low_complexity 1 26 0 3 1563 328 286 134 14 chrX 128196439 128196648 -38453648 - L1M5 LINE L1 -346 5778 5545 3 1563 441 284 94 5 chrX 128198010 128198212 -38452084 + Cheshire DNA MER1_type 2086 2305 -115 3 1563 529 275 98 53 chrX 128199063 128199401 -38450895 + Cheshire DNA MER1_type 2052 2404 -16 3 1563 2137 77 46 3 chrX 128199729 128200031 -38450265 + L1_Mus1 LINE L1 6253 6567 0 3 1563 2579 56 3 75 chrX 128200262 128200649 -38449647 + RLTR10B2 LTR ERVK 1 359 -6 3 1563 890 73 3 27 chrX 128200649 128200782 -38449514 + RLTR10-int LTR ERVK 88 267 -7314 3 1563 452 80 42 59 chrX 128200871 128200990 -38449306 + GA-rich Low_complexity Low_complexity 3 119 0 3 1563 2725 56 132 3 chrX 128201025 128201426 -38448870 + RLTR10-int LTR ERVK 553 992 -995 3 1563 472 318 28 28 chrX 128201451 128201846 -38448450 + RLTR10-int LTR ERVK 822 1566 -6015 3 1563 1532 108 100 0 chrX 128201856 128202087 -38448209 + RLTR10-int LTR ERVK 5002 5255 -1287 3 1563 4308 123 16 15 chrX 128202091 128202776 -38447520 + IAPEY3-int LTR ERVK 6995 7680 0 3 1563 2775 49 3 35 chrX 128202776 128203153 -38447143 + RLTR10B2 LTR ERVK 1 365 0 3 1563 1668 161 48 63 chrX 128203310 128203641 -38446655 + ORR1A3 LTR MaLR 1 326 0 3 1563 22 56 0 0 chrX 128204164 128204200 -38446096 + AT_rich Low_complexity Low_complexity 1 36 0 3 1563 903 109 0 0 chrX 128204359 128204497 -38445799 + (TC)n Simple_repeat Simple_repeat 1 138 0 3 1563 407 210 0 39 chrX 128204497 128204601 -38445695 - Lx3A LINE L1 -20 6961 6862 3 1563 955 186 21 110 chrX 128204683 128204919 -38445377 + RLTR26 LTR ERVK 428 642 0 3 1563 3772 144 58 15 chrX 128204919 128205569 -38444727 + MERVK26-int LTR ERVK 1 679 -6240 3 1563 396 0 0 0 chrX 128205569 128205613 -38444683 + (TTTTA)n Simple_repeat Simple_repeat 3 46 0 3 1563 3326 33 5 2 chrX 128205628 128206023 -38444273 + MTA_Mm LTR MaLR 1 396 0 3 1563 825 111 15 0 chrX 128206023 128206158 -38444138 + MTA_Mm-int LTR MaLR 1 137 -961 3 1563 1175 192 20 99 chrX 128206121 128206415 -38443881 + RLTR26 LTR ERVK 372 642 0 3 1563 268 317 12 0 chrX 128206708 128206790 -38443506 + L2a LINE L2 3336 3418 -8 3 1563 3093 272 45 23 chrX 128207085 128208015 -38442281 + Charlie1a DNA MER1_type 52 1002 -453 3 1563 5671 123 9 12 chrX 128208550 128209440 -38440856 - Lx3A LINE L1 -10 6971 6085 3 1563 6244 141 18 24 chrX 128209440 128210624 -38439672 - L1_Mus4 LINE L1 -15 6621 5444 3 1563 31926 86 7 20 chrX 128210627 128213922 -38436374 - L1Md_F2 LINE L1 -10 6572 3322 3 1563 350 21 0 21 chrX 128213922 128213970 -38436326 + (TTTTG)n Simple_repeat Simple_repeat 4 50 0 3 1563 31926 142 29 22 chrX 128213970 128217289 -38433007 - L1Md_F2 LINE L1 -2562 3321 1 3 1563 3235 197 6 24 chrX 128217288 128217954 -38432342 - L1_Mus4 LINE L1 -421 5462 4809 3 1563 3003 129 67 33 chrX 128217954 128218933 -38431363 - RMER17D LTR ERVK -2 887 1 3 1563 5187 156 25 1 chrX 128218933 128219869 -38430427 - L1_Mur2 LINE L1 -1066 4811 3854 3 1563 5316 127 16 9 chrX 128219864 128220760 -38429536 - MusHAL1 LINE L1 -1094 1618 717 3 1563 1202 117 17 0 chrX 128220849 128221029 -38429267 + B2_Mm1t SINE B2 2 184 -9 3 1563 27 29 0 0 chrX 128221378 128221412 -38428884 + AT_rich Low_complexity Low_complexity 1 34 0 3 1563 337 324 105 28 chrX 128221588 128221874 -38428422 - L1M4b LINE L1 -1812 5194 4887 3 1563 443 283 86 14 chrX 128222240 128222380 -38427916 + ORR1E LTR MaLR 3 152 -207 3 1563 278 333 0 24 chrX 128222440 128222523 -38427773 - RSINE1 SINE B4 0 165 85 3 1563 435 271 31 47 chrX 128222702 128222830 -38427466 - ID_B1 SINE B4 -34 190 65 3 1563 856 302 15 5 chrX 128223076 128223282 -38427014 - B3 SINE B2 -8 208 1 3 1563 406 205 53 30 chrX 128223328 128223459 -38426837 - MER31-int LTR ERV1 -1137 3799 3666 3 1563 378 248 50 0 chrX 128223579 128223680 -38426616 + L1M4 LINE L1 4763 4868 -1278 3 1563 345 250 60 36 chrX 128223677 128223843 -38426453 - L1M4b LINE L1 -5167 2167 1998 3 1563 227 211 58 0 chrX 128223852 128223904 -38426392 + MTEb LTR MaLR 1 55 -324 3 1563 204 179 0 25 chrX 128224395 128224435 -38425861 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 1563 835 319 43 17 chrX 128224689 128224989 -38425307 + Tigger7 DNA MER2_type 39 346 -2145 3 1563 259 343 0 0 chrX 128225072 128225142 -38425154 + Tigger7 DNA MER2_type 2414 2483 -8 3 1563 4297 140 14 20 chrX 128225754 128225838 -38424458 - Lx2B LINE L1 -4 6996 6916 3 1563 3221 40 25 0 chrX 128225838 128226239 -38424057 - RLTR10A LTR ERVK 0 411 1 3 1563 4297 140 14 20 chrX 128226239 128226867 -38423429 - Lx2B LINE L1 -85 6915 6288 3 1563 31 68 0 0 chrX 128227318 128227377 -38422919 + AT_rich Low_complexity Low_complexity 1 59 0 3 1563 460 250 119 48 chrX 128227584 128227836 -38422460 + L1MC3 LINE L1 2658 2927 -3219 3 1563 2545 54 0 0 chrX 128227890 128228205 -38422091 - L1_Mus1 LINE L1 -644 5923 5609 3 1563 5126 71 1 0 chrX 128228206 128228869 -38421427 + L1_Mus1 LINE L1 5904 6567 0 3 1563 274 279 178 0 chrX 128228922 128228997 -38421299 + L1MC3 LINE L1 3033 3114 -3032 3 1563 243 88 0 0 chrX 128228997 128229031 -38421265 + (TAA)n Simple_repeat Simple_repeat 2 35 0 3 1563 274 279 178 0 chrX 128229031 128229152 -38421144 + L1MC3 LINE L1 3115 3263 -2883 3 1563 324 280 135 46 chrX 128229179 128229518 -38420778 + RLTR12B LTR ERVK 104 505 -23 3 1563 402 21 0 0 chrX 128229613 128229660 -38420636 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 1563 255 79 0 0 chrX 128229851 128229889 -38420407 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 1563 230 336 38 5 chrX 128229909 128230118 -38420178 + L1MC3 LINE L1 3582 3797 -2349 3 1563 347 321 0 0 chrX 128230517 128230601 -38419695 + LTR52 LTR ERVL 69 152 -269 3 1563 6496 54 11 5 chrX 128230933 128231736 -38418560 + RLTR13C2 LTR ERVK 1 808 0 3 1563 1177 193 16 8 chrX 128231785 128232052 -38418244 + RLTR26 LTR ERVK 1 258 -648 3 1563 877 224 71 61 chrX 128232053 128232333 -38417963 + RMER13B LTR ERVK 364 646 -262 3 1563 242 206 161 2 chrX 128232442 128232538 -38417758 + PB1 SINE Alu 16 126 -1 3 1563 1847 310 81 78 chrX 128232577 128233513 -38416783 + L1MC3 LINE L1 5387 6400 -1385 3 1563 3043 74 0 10 chrX 128233513 128233924 -38416372 - L1Md_F2 LINE L1 0 6582 6176 3 1563 1847 310 81 78 chrX 128233924 128234441 -38415855 + L1MC3 LINE L1 6401 6844 -941 3 1563 325 296 24 8 chrX 128234451 128234577 -38415719 + GA-rich Low_complexity Low_complexity 1 128 0 3 1563 1172 61 0 0 chrX 128234615 128234763 -38415533 + B1_Mus1 SINE Alu 1 148 0 3 1563 416 246 58 34 chrX 128234781 128234987 -38415309 + L1MC3 LINE L1 6902 7112 -673 3 1563 664 192 0 0 chrX 128235075 128235195 -38415101 + MTC LTR MaLR 1 120 -301 3 1563 3390 229 36 26 chrX 128235204 128236567 -38413729 - RMER1A Other Other -4 1062 4 3 1563 1563 310 17 14 chrX 128236752 128237268 -38413028 + RMER1B Other Other 1 450 -616 3 1563 332 122 33 14 chrX 128237504 128237602 -38412694 - ORR1A4 LTR MaLR -8 386 267 3 1563 307 189 100 0 chrX 128237663 128237753 -38412543 - Lx2 LINE L1 -66 6931 6833 3 1563 1527 115 59 73 chrX 128237753 128238025 -38412271 - ORR1A4 LTR MaLR -61 268 1 3 1563 5156 179 111 24 chrX 128238025 128239093 -38411203 - ORR1A4-int LTR MaLR 0 1963 803 3 1563 1334 161 15 80 chrX 128239078 128239342 -38410954 - ORR1A4 LTR MaLR -79 247 1 3 1563 1384 209 98 0 chrX 128239342 128239627 -38410669 + MTC LTR MaLR 109 421 0 3 1563 642 269 30 75 chrX 128239734 128239935 -38410361 - B3A SINE B2 0 198 7 3 1563 1042 100 0 53 chrX 128240213 128240403 -38409893 + GA-rich Low_complexity Low_complexity 1 180 0 3 1563 25 0 0 0 chrX 128240416 128240441 -38409855 + AT_rich Low_complexity Low_complexity 1 25 0 3 1563 1060 234 42 13 chrX 128240457 128240764 -38409532 + L1MC3 LINE L1 7414 7729 -56 3 1563 885 269 31 0 chrX 128241609 128241836 -38408460 - Tigger5 DNA MER2_type -5 2401 2168 3 1563 486 249 90 30 chrX 128241816 128241982 -38408314 - Tigger5 DNA MER2_type -2163 243 72 3 1563 19420 84 9 5 chrX 128241986 128244813 -38405483 - L1Md_F2 LINE L1 -12 6570 3728 3 1563 2812 68 5 0 chrX 128244813 128245182 -38405114 - L1Md_F2 LINE L1 -1 6581 6211 3 1563 19420 86 1 7 chrX 128245182 128245720 -38404576 - L1Md_F2 LINE L1 -2156 3727 3198 3 1563 5045 99 38 1 chrX 128245719 128247146 -38403150 - L1Md_F2 LINE L1 -4015 1868 387 3 1563 287 310 69 10 chrX 128247475 128247576 -38402720 - PB1D7 SINE Alu 0 120 14 3 1563 21 36 0 0 chrX 128247589 128247617 -38402679 + AT_rich Low_complexity Low_complexity 1 28 0 3 1563 411 278 36 50 chrX 128248166 128248306 -38401990 - RMER5 LTR ERV1 -224 310 173 3 1563 572 226 44 22 chrX 128248313 128248449 -38401847 - RMER5 LTR ERV1 -337 197 59 3 1563 378 61 0 0 chrX 128248457 128248506 -38401790 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 1563 402 289 24 88 chrX 128249577 128249702 -38400594 + PB1D10 SINE Alu 1 117 0 3 1563 21 0 0 0 chrX 128250011 128250032 -38400264 + AT_rich Low_complexity Low_complexity 1 21 0 3 1563 295 219 0 0 chrX 128250269 128250333 -38399963 + L1_Mur1 LINE L1 682 745 -6237 3 1563 1664 184 50 55 chrX 128250486 128250944 -38399352 + L1_Mur1 LINE L1 813 1288 -5796 3 1563 263 154 0 0 chrX 128250926 128250965 -38399331 - Lx2 LINE L1 -646 6351 6313 3 1563 2706 134 53 0 chrX 128250961 128251393 -38398903 + Lx2B LINE L1 6350 6804 -196 3 1563 751 194 7 0 chrX 128251389 128251533 -38398763 + Lx3C LINE L1 6467 6611 -365 3 1563 874 168 35 6 chrX 128251517 128251691 -38398605 + Lx2B LINE L1 6821 6999 -1 3 1563 1165 150 16 0 chrX 128251688 128251939 -38398357 + L1_Mur1 LINE L1 1174 1428 -4458 3 1563 3433 227 40 9 chrX 128251938 128252712 -38397584 + Lx2B LINE L1 6199 6996 -4 3 1563 1637 188 87 25 chrX 128253807 128254162 -38396134 - Lx2B LINE L1 -5 6995 6619 3 1563 646 251 107 11 chrX 128254319 128254496 -38395800 + B3 SINE B2 18 211 -5 3 1563 741 296 158 34 chrX 128255027 128255408 -38394888 - AmnSINE1 SINE SINE -4 571 144 3 1563 249 57 0 0 chrX 128256691 128256726 -38393570 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1563 392 319 13 60 chrX 128256864 128257014 -38393282 - RSINE1 SINE B4 0 165 23 3 1563 626 238 30 8 chrX 128257019 128257150 -38393146 + B1_Mur1 SINE Alu 7 140 -9 3 1563 273 233 31 87 chrX 128257297 128257424 -38392872 - Lx4B LINE L1 -6 7052 6933 3 1563 5319 199 59 24 chrX 128257445 128257545 -38392751 - Lx5 LINE L1 -35 7015 6906 3 1563 414 0 0 0 chrX 128257545 128257591 -38392705 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1563 5319 199 59 24 chrX 128257591 128258682 -38391614 - Lx5 LINE L1 -145 6905 5783 3 1563 7399 141 37 52 chrX 128258693 128261097 -38389199 - Lx3C LINE L1 -3 6973 4616 3 1563 2803 161 41 0 chrX 128261064 128261578 -38388718 - L1_Mur2 LINE L1 -431 5446 4912 3 1563 7528 35 0 0 chrX 128261591 128262481 -38387815 - L1Md_T LINE L1 -1 6581 5692 3 1563 825 198 19 0 chrX 128262453 128262615 -38387681 - L1_Mur2 LINE L1 -799 5078 4914 3 1563 857 313 75 16 chrX 128262767 128263072 -38387224 + ORR1E LTR MaLR 26 348 -11 3 1563 350 104 0 0 chrX 128263097 128263145 -38387151 + RMER10A LTR ERVL 30 77 -365 3 1563 1381 258 82 10 chrX 128263402 128263793 -38386503 + MTD LTR MaLR 1 419 0 3 1563 569 325 0 0 chrX 128263856 128264016 -38386280 - MTEb-int LTR MaLR -1419 161 2 3 1563 1018 270 121 15 chrX 128264022 128264360 -38385936 - MTEb LTR MaLR -5 374 1 3 1563 237 288 0 0 chrX 128264997 128265063 -38385233 - L3 LINE CR1 -552 3937 3872 3 1563 683 213 29 0 chrX 128266836 128266972 -38383324 + B1_Mus1 SINE Alu 1 140 -8 3 1563 245 62 0 0 chrX 128267052 128267084 -38383212 - L1Md_F2 LINE L1 -480 5403 5372 3 1563 807 52 0 0 chrX 128267080 128267176 -38383120 + L1Md_F2 LINE L1 5491 5586 -297 3 1563 8204 30 13 1 chrX 128267177 128268159 -38382137 + L1Md_F2 LINE L1 5588 6581 -1 3 1563 502 325 120 10 chrX 128268929 128269137 -38381159 + MER2 DNA MER2_type 111 341 -4 3 1563 1275 99 28 0 chrX 128270060 128270241 -38380055 + L1_Mus4 LINE L1 6371 6556 -80 3 1563 25 0 0 0 chrX 128270241 128270266 -38380030 + AT_rich Low_complexity Low_complexity 1 25 0 4 1563 246 189 25 0 chrX 128271395 128271451 -38378845 - BLACKJACK DNA AcHobo 0 2944 2887 4 1563 1017 111 42 47 chrX 128271490 128271651 -38378645 + B2_Mm2 SINE B2 2 167 -28 4 1563 976 71 8 0 chrX 128271651 128271778 -38378518 + B1_Mm SINE Alu 1 128 -19 4 1563 333 0 0 0 chrX 128271778 128271815 -38378481 + (TC)n Simple_repeat Simple_repeat 1 37 0 4 1563 1017 111 42 47 chrX 128271815 128271842 -38378454 + B2_Mm2 SINE B2 168 189 -6 4 1563 901 282 125 53 chrX 128273633 128274049 -38376247 + MLT1C LTR MaLR 1 446 -21 4 1563 3386 178 6 106 chrX 128274670 128274895 -38375401 - L1_Mur2 LINE L1 -291 5586 5364 4 1563 270 73 0 0 chrX 128274895 128274936 -38375360 + (TATG)n Simple_repeat Simple_repeat 2 42 0 4 1563 3386 178 6 106 chrX 128274936 128274948 -38375348 - L1_Mur2 LINE L1 -514 5363 5363 4 1563 1051 125 6 0 chrX 128274948 128275116 -38375180 - L1_Mus1 LINE L1 -1 6566 6398 4 1563 3386 178 6 106 chrX 128275116 128275163 -38375133 - L1_Mur2 LINE L1 -514 5363 5356 4 1563 315 0 0 0 chrX 128275163 128275198 -38375098 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 1563 4387 64 16 7 chrX 128275198 128275777 -38374519 - L1Md_F2 LINE L1 -16 6566 5983 4 1563 3386 178 6 106 chrX 128275777 128276345 -38373951 - L1_Mur2 LINE L1 -522 5355 4818 4 1563 7183 154 23 61 chrX 128276344 128277747 -38372549 + Lx3C LINE L1 5628 6976 0 4 1563 420 236 69 35 chrX 128279100 128279245 -38371051 - Lx9 LINE L1 -132 7512 7363 4 1563 356 32 82 31 chrX 128279309 128279406 -38370890 + (CAAA)n Simple_repeat Simple_repeat 2 103 0 4 1563 2504 92 37 8 chrX 128279529 128279912 -38370384 - Lx2 LINE L1 -1 6996 6603 4 1563 622 222 201 7 chrX 128280131 128280285 -38370011 - B3 SINE B2 -32 184 1 4 1563 981 337 71 36 chrX 128280694 128281143 -38369153 + MLT1C LTR MaLR 3 467 0 4 1563 1319 202 8 19 chrX 128281712 128281974 -38368322 - MTC LTR MaLR -162 259 1 4 1563 214 262 0 47 chrX 128283332 128283396 -38366900 + B4 SINE B4 79 139 -153 4 1563 311 271 131 20 chrX 128283346 128283456 -38366840 + B1F SINE Alu 6 116 -33 4 1563 239 269 104 21 chrX 128283501 128283583 -38366713 + L1M4b LINE L1 3490 3582 -3752 4 1563 2812 107 64 20 chrX 128283583 128284039 -38366257 + L1_Mus4 LINE L1 6154 6629 -7 4 1563 239 265 97 53 chrX 128284039 128284203 -38366093 + L1M4b LINE L1 3583 3645 -3689 4 1563 282 320 39 0 chrX 128284325 128284403 -38365893 - BC1_Mm scRNA scRNA -67 85 5 4 1563 278 340 91 9 chrX 128284414 128284524 -38365772 - PB1 SINE Alu -3 124 6 4 1563 645 225 0 40 chrX 128284587 128284712 -38365584 + B2_Mm2 SINE B2 3 122 -73 4 1563 230 300 200 0 chrX 128284936 128285006 -38365290 - RSINE1 SINE B4 -31 134 51 4 1563 406 329 93 27 chrX 128285212 128285437 -38364859 - MLT1A1 LTR MaLR -164 244 5 4 1563 768 290 64 14 chrX 128285438 128285784 -38364512 + L1M3 LINE L1 2549 2911 -3229 4 1563 33 25 0 0 chrX 128285815 128285855 -38364441 + AT_rich Low_complexity Low_complexity 1 40 0 4 1563 226 254 9 35 chrX 128286806 128286920 -38363376 + L1M2 LINE L1 1842 1952 -4897 4 1563 547 258 37 53 chrX 128286947 128287193 -38363103 - L1_Mur3 LINE L1 -2884 2996 2755 4 1563 1224 272 72 8 chrX 128287241 128287741 -38362555 + L1_Mur3 LINE L1 3235 3766 -2114 4 1563 7149 102 14 7 chrX 128287743 128289008 -38361288 - L1_Mus3 LINE L1 0 6638 5365 4 1563 32379 104 12 3 chrX 128289024 128295358 -38354938 - L1Md_F2 LINE L1 -2 6580 189 4 1563 4435 161 19 4 chrX 128295337 128296165 -38354131 - L1_Mm LINE L1 -495 5388 4548 4 1563 879 316 121 19 chrX 128296264 128296587 -38353709 - ORR1D2 LTR MaLR -11 359 4 4 1563 351 257 9 28 chrX 128296588 128296696 -38353600 + L1_Mur3 LINE L1 3822 3927 -1953 4 1563 290 282 0 0 chrX 128296730 128296801 -38353495 + Lx8 LINE L1 6331 6401 -1072 4 1563 266 293 24 0 chrX 128296800 128296923 -38353373 + L1M3 LINE L1 4279 4404 -1736 4 1563 22 0 0 0 chrX 128297429 128297451 -38352845 + AT_rich Low_complexity Low_complexity 1 22 0 4 1563 255 217 72 0 chrX 128297747 128297816 -38352480 - L1MA7 LINE L1 0 6291 6218 4 1563 215 315 78 42 chrX 128298449 128298641 -38351655 + MIRc SINE MIR 70 268 0 4 1563 317 189 168 0 chrX 128299018 128299113 -38351183 + L2a LINE L2 3226 3336 -90 4 1563 480 18 0 0 chrX 128299115 128299172 -38351124 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1563 254 259 0 0 chrX 128300301 128300359 -38349937 + (TATG)n Simple_repeat Simple_repeat 2 59 0 4 1563 550 51 0 13 chrX 128300973 128301052 -38349244 + L1_Mus1 LINE L1 6490 6567 0 4 1563 183 210 97 0 chrX 128301315 128301377 -38348919 + MIR SINE MIR 128 195 -67 4 1563 262 350 13 40 chrX 128302023 128302172 -38348124 + MIR SINE MIR 92 236 -26 4 1563 338 47 0 0 chrX 128302203 128302246 -38348050 - MTA_Mm LTR MaLR 0 400 358 4 1563 1551 99 4 13 chrX 128302247 128302483 -38347813 - MTA_Mm LTR MaLR -162 234 1 4 1563 8665 145 16 7 chrX 128303379 128305102 -38345194 - Lx2 LINE L1 0 6997 5259 4 1563 336 140 0 0 chrX 128305100 128305157 -38345139 + L1_Mur1 LINE L1 4734 4790 -1096 4 1563 310 320 32 16 chrX 128305157 128305281 -38345015 + B3 SINE B2 91 216 0 4 1563 239 273 124 47 chrX 128306575 128306744 -38343552 + Lx8 LINE L1 6008 6189 -1284 4 1563 495 233 0 0 chrX 128306746 128306875 -38343421 + (TA)n Simple_repeat Simple_repeat 1 129 0 4 1563 1242 14 7 0 chrX 128307018 128307163 -38343133 - B1_Mm SINE Alu 0 147 2 4 1563 3276 290 66 25 chrX 128307171 128308193 -38342103 + Lx7 LINE L1 6298 7361 -335 4 1563 224 174 43 0 chrX 128308248 128308294 -38342002 + GA-rich Low_complexity Low_complexity 4 51 0 4 1563 270 233 27 0 chrX 128308306 128308379 -38341917 + Lx7 LINE L1 7603 7677 -19 4 1563 204 140 60 0 chrX 128308381 128308431 -38341865 + (TTAAA)n Simple_repeat Simple_repeat 4 56 0 4 1563 21 36 0 0 chrX 128309426 128309454 -38340842 + AT_rich Low_complexity Low_complexity 1 28 0 4 1563 22 0 0 0 chrX 128310728 128310750 -38339546 + AT_rich Low_complexity Low_complexity 1 22 0 4 1563 22 0 0 0 chrX 128310828 128310850 -38339446 + AT_rich Low_complexity Low_complexity 1 22 0 4 1563 1709 152 129 6 chrX 128311784 128312101 -38338195 - MTC LTR MaLR -1 420 65 4 1563 354 23 0 0 chrX 128312208 128312251 -38338045 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1563 372 357 22 15 chrX 128312253 128312523 -38337773 - Lx9 LINE L1 -173 7471 7200 4 1563 276 299 27 36 chrX 128312545 128312656 -38337640 - Lx8 LINE L1 -524 6949 6840 4 1563 1127 332 2 13 chrX 128312641 128313035 -38337261 + Lx9 LINE L1 6600 6989 -655 4 1563 23 33 0 0 chrX 128313499 128313529 -38336767 + AT_rich Low_complexity Low_complexity 1 30 0 4 1563 23 0 0 0 chrX 128314585 128314608 -38335688 + AT_rich Low_complexity Low_complexity 1 23 0 4 1563 8360 77 20 2 chrX 128314608 128316352 -38333944 - L1Md_F2 LINE L1 -13 6569 4795 4 1563 2921 166 0 2 chrX 128316349 128316851 -38333445 - L1Md_F LINE L1 -5839 680 180 4 1563 1240 167 68 4 chrX 128316851 128317085 -38333211 - L1VL1 LINE L1 -6156 266 18 4 1563 279 0 0 0 chrX 128317138 128317169 -38333127 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1563 21 57 0 0 chrX 128318511 128318546 -38331750 + AT_rich Low_complexity Low_complexity 1 35 0 4 1563 450 0 0 0 chrX 128318592 128318642 -38331654 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 4 195 2171 79 40 0 chrX 128319209 128319512 -38330784 - L1_Mus1 LINE L1 -424 6143 5829 4 1564 2927 80 35 0 chrX 128319512 128319910 -38330386 + L1_Mus1 LINE L1 6156 6567 0 4 1564 263 140 0 74 chrX 128319910 128319923 -38330373 - L1_Mur2 LINE L1 -54 5823 5813 4 1564 186 43 0 0 chrX 128320172 128320195 -38330101 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 4 1564 22 35 0 0 chrX 128320328 128320357 -38329939 + AT_rich Low_complexity Low_complexity 1 29 0 4 1564 239 332 130 14 chrX 128320635 128320858 -38329438 + MIR SINE MIR 2 250 -12 4 1564 1775 236 25 72 chrX 128320859 128321330 -38328966 + Lx5 LINE L1 6555 7003 -47 4 1564 225 0 0 0 chrX 128321351 128321376 -38328920 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 4 1564 234 0 0 0 chrX 128321706 128321732 -38328564 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4 1564 1472 252 37 14 chrX 128322747 128323101 -38327195 - MTE2b LTR MaLR -2 377 16 4 1564 25 31 0 0 chrX 128323425 128323457 -38326839 + AT_rich Low_complexity Low_complexity 1 32 0 4 1564 216 0 0 0 chrX 128324003 128324027 -38326269 + (TA)n Simple_repeat Simple_repeat 1 24 0 4 1564 186 43 0 0 chrX 128324202 128324225 -38326071 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1564 195 42 0 0 chrX 128324896 128324920 -38325376 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1564 273 29 0 0 chrX 128325560 128325594 -38324702 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1564 270 0 0 0 chrX 128325701 128325731 -38324565 + (TC)n Simple_repeat Simple_repeat 2 31 0 4 1564 393 22 0 0 chrX 128325731 128325776 -38324520 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1564 381 115 90 0 chrX 128326095 128326173 -38324123 + Lx LINE L1 6558 6642 -12 4 1564 3766 176 99 28 chrX 128326291 128327082 -38323214 - RLTR25B LTR ERVK -175 853 7 4 1564 238 250 10 52 chrX 128327102 128327199 -38323097 + (CTAAA)n Simple_repeat Simple_repeat 2 94 0 4 1564 1916 141 37 3 chrX 128327260 128327581 -38322715 - RMER6C LTR ERVK -358 332 1 4 1564 1718 251 58 14 chrX 128327605 128328234 -38322062 - Lx9 LINE L1 -7 7637 6954 4 1564 1597 264 83 60 chrX 128328543 128329023 -38321273 + RLTR18B LTR ERVK 22 512 0 4 1564 670 318 87 74 chrX 128329629 128329952 -38320344 - ORR1E LTR MaLR -2 357 31 4 1564 457 323 67 31 chrX 128329980 128330175 -38320121 - ORR1E-int LTR MaLR -25 1555 1354 4 1564 1574 160 184 3 chrX 128330270 128330602 -38319694 + ORR1B1 LTR MaLR 1 392 -2 4 1564 6389 210 35 14 chrX 128330602 128332078 -38318218 + ORR1B1-int LTR MaLR 1 1509 0 4 1564 1585 209 79 27 chrX 128332078 128332394 -38317902 + ORR1B1 LTR MaLR 1 336 -58 4 1564 306 0 0 0 chrX 128332394 128332428 -38317868 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 1564 1585 209 79 27 chrX 128332428 128332479 -38317817 + ORR1B1 LTR MaLR 337 386 -8 4 1564 1925 298 71 104 chrX 128332486 128333326 -38316970 - ORR1E-int LTR MaLR -226 1354 542 4 1564 193 118 39 0 chrX 128333392 128333443 -38316853 + (CAA)n Simple_repeat Simple_repeat 2 54 0 4 1564 27 29 0 0 chrX 128334031 128334065 -38316231 + AT_rich Low_complexity Low_complexity 1 34 0 4 1564 6202 17 0 0 chrX 128334149 128334856 -38315440 - L1Md_A LINE L1 0 6582 5876 5 1564 24 96 0 0 chrX 128334973 128335046 -38315250 + AT_rich Low_complexity Low_complexity 1 73 0 5 1564 2902 95 2 5 chrX 128335340 128335753 -38314543 - L1_Mus4 LINE L1 -3 6633 6222 5 1564 452 32 16 0 chrX 128335807 128335869 -38314427 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 5 1564 830 42 200 0 chrX 128335869 128335989 -38314307 - B1_Mus2 SINE Alu -3 144 1 5 1564 23 33 0 0 chrX 128336561 128336591 -38313705 + AT_rich Low_complexity Low_complexity 1 30 0 5 1564 7402 68 17 3 chrX 128336591 128338199 -38312097 - L1Md_F2 LINE L1 -2 6580 4960 5 1564 3627 65 0 0 chrX 128338187 128338660 -38311636 + L1_Mm LINE L1 3869 4341 -1542 5 1564 246 333 159 28 chrX 128339524 128339706 -38310590 + B4A SINE B4 75 280 -12 5 1564 877 242 86 50 chrX 128339902 128340000 -38310296 + ORR1B2-int LTR MaLR 1222 1321 -188 5 1564 281 26 26 0 chrX 128340000 128340038 -38310258 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1564 877 242 86 50 chrX 128340038 128340217 -38310079 + ORR1B2-int LTR MaLR 1322 1508 -1 5 1564 1783 205 29 3 chrX 128340219 128340561 -38309735 + ORR1B2 LTR MaLR 3 353 -14 5 1564 655 329 128 41 chrX 128340594 128341053 -38309243 + MLT2B4 LTR ERVL 1 520 0 5 1564 387 92 0 0 chrX 128341058 128341123 -38309173 + (TC)n Simple_repeat Simple_repeat 2 66 0 5 1564 775 108 0 8 chrX 128341263 128341384 -38308912 + Lx LINE L1 6527 6646 -8 5 1564 192 152 0 0 chrX 128341407 128341440 -38308856 + (TAA)n Simple_repeat Simple_repeat 3 35 0 5 1564 277 300 29 20 chrX 128341643 128341745 -38308551 - PB1D10 SINE Alu 0 117 15 5 1564 37140 23 2 7 chrX 128341933 128347137 -38303159 + L1Md_A LINE L1 416 5586 -297 5 1564 8208 42 0 1 chrX 128347137 128348176 -38302120 + L1Md_A LINE L1 5587 6582 0 5 1564 468 168 46 9 chrX 128348320 128348428 -38301868 + Lx LINE L1 6528 6639 -15 5 1564 7446 61 29 3 chrX 128348767 128349725 -38300571 - L1Md_F2 LINE L1 0 6582 5600 5 1564 2318 131 31 10 chrX 128350004 128350389 -38299907 + Lx LINE L1 6261 6653 -1 5 1564 386 301 10 0 chrX 128350686 128350789 -38299507 + PB1D10 SINE Alu 9 112 -5 5 1564 248 91 0 22 chrX 128350861 128350906 -38299390 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 1564 463 304 40 162 chrX 128351166 128351328 -38298968 + B4A SINE B4 13 145 -147 5 1564 738 181 54 0 chrX 128351328 128351477 -38298819 - Lx4A LINE L1 -1 7057 6901 5 1564 463 304 40 162 chrX 128351477 128351561 -38298735 + B4A SINE B4 146 229 -63 5 1564 25 0 0 0 chrX 128351657 128351682 -38298614 + AT_rich Low_complexity Low_complexity 1 25 0 5 1564 810 239 81 2 chrX 128351729 128351977 -38298319 + Lx7 LINE L1 5673 5914 -1782 5 1564 489 62 0 0 chrX 128352596 128352661 -38297635 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1564 26 0 0 0 chrX 128352661 128352687 -38297609 + AT_rich Low_complexity Low_complexity 1 26 0 5 1564 769 315 82 21 chrX 128352974 128353253 -38297043 - MLT2B1 LTR ERVL -213 307 12 5 1564 207 108 27 0 chrX 128353478 128353515 -38296781 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 1564 273 343 10 0 chrX 128354071 128354170 -38296126 + PB1D10 SINE Alu 18 117 0 5 1564 546 16 0 0 chrX 128354743 128354806 -38295490 + (TA)n Simple_repeat Simple_repeat 2 64 0 5 1564 407 385 18 39 chrX 128356005 128356292 -38294004 - MLT1A0 LTR MaLR 0 374 78 5 1564 31816 103 3 3 chrX 128356296 128358678 -38291618 - L1_Mus3 LINE L1 -561 6077 3705 5 1564 2586 78 5 111 chrX 128358678 128359112 -38291184 - RLTR10 LTR ERVK -2 388 1 5 1564 31816 108 9 7 chrX 128359112 128361924 -38288372 - L1_Mus3 LINE L1 -2179 3704 873 5 1564 1007 215 128 36 chrX 128361924 128362228 -38288068 - IAPEY3_LTR LTR ERVK 0 332 1 5 1564 6101 156 50 22 chrX 128362228 128363119 -38287177 - L1_Mus3 LINE L1 -5744 872 98 5 1564 407 307 21 58 chrX 128363150 128363340 -38286956 - Lx9 LINE L1 -1104 6540 6358 5 1564 23 68 0 0 chrX 128363384 128363428 -38286868 + AT_rich Low_complexity Low_complexity 1 44 0 5 1564 621 292 24 1 chrX 128363445 128363604 -38286692 - B3 SINE B2 -35 163 1 5 1564 498 244 0 0 chrX 128363925 128364081 -38286215 + (CA)n Simple_repeat Simple_repeat 1 156 0 5 1564 763 308 10 12 chrX 128364446 128364827 -38285469 - L1MB7 LINE L1 -234 5940 5552 5 1564 21 0 0 0 chrX 128365061 128365082 -38285214 + AT_rich Low_complexity Low_complexity 1 21 0 5 1564 321 376 97 64 chrX 128365125 128365392 -38284904 - B4 SINE B4 -16 276 1 5 1564 22 0 0 0 chrX 128365538 128365560 -38284736 + AT_rich Low_complexity Low_complexity 1 22 0 5 1564 8025 47 1 1 chrX 128365743 128367368 -38282928 - L1Md_F2 LINE L1 -1 6581 4958 5 1564 225 108 0 0 chrX 128369554 128369591 -38280705 + (TCCC)n Simple_repeat Simple_repeat 1 37 0 5 1564 255 93 0 0 chrX 128369620 128369663 -38280633 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1564 997 152 121 5 chrX 128369750 128369948 -38280348 + URR1A DNA MER1_type 1 221 -5 5 1564 412 292 37 18 chrX 128369805 128369969 -38280327 - CYRA11_Mm Unknown Y-chromosome -297 320 154 5 1564 341 321 44 22 chrX 128370105 128370242 -38280054 - B1F SINE Alu 0 149 10 5 1564 24 32 0 0 chrX 128370295 128370326 -38279970 + AT_rich Low_complexity Low_complexity 1 31 0 5 1564 4124 39 2 0 chrX 128370523 128371015 -38279281 - L1Md_F2 LINE L1 -2 6580 6088 5 1564 598 394 3 21 chrX 128371217 128371502 -38278794 - Lx8 LINE L1 -238 7235 6956 5 1564 201 143 0 0 chrX 128371546 128371581 -38278715 + (GTTTG)n Simple_repeat Simple_repeat 2 36 0 5 1564 1735 295 90 82 chrX 128371826 128372201 -38278095 - L1_Mur3 LINE L1 -1522 4358 4003 5 1564 3790 52 2 0 chrX 128372201 128372665 -38277631 - L1_Mus1 LINE L1 -5 6562 6098 5 1564 1735 295 90 82 chrX 128372665 128373191 -38277105 - L1_Mur3 LINE L1 -1878 4002 3426 5 1564 459 0 0 0 chrX 128373191 128373242 -38277054 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1564 1735 295 90 82 chrX 128373242 128373710 -38276586 - L1_Mur3 LINE L1 -2455 3425 3050 5 1564 2478 48 0 6 chrX 128373710 128374024 -38276272 - L1Md_F2 LINE L1 -13 6569 6258 5 1564 1735 295 90 82 chrX 128374024 128374315 -38275981 - L1_Mur3 LINE L1 -2831 3049 2738 5 1564 618 82 0 0 chrX 128374315 128374400 -38275896 + (TA)n Simple_repeat Simple_repeat 2 86 0 5 1564 1735 295 90 82 chrX 128374400 128374520 -38275776 - L1_Mur3 LINE L1 -3143 2737 2574 5 1564 528 122 0 0 chrX 128374520 128374602 -38275694 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 5 1564 1735 295 90 82 chrX 128374602 128375085 -38275211 - L1_Mur3 LINE L1 -3307 2573 2074 5 1564 1603 242 54 3 chrX 128375138 128375506 -38274790 + MTD LTR MaLR 1 387 -32 5 1564 1580 29 4 103 chrX 128376300 128376534 -38273762 - RLTR10B2 LTR ERVK -153 212 2 5 1564 675 0 0 0 chrX 128376534 128376609 -38273687 + (GAAA)n Simple_repeat Simple_repeat 3 77 0 5 1564 231 320 27 0 chrX 128377284 128377359 -38272937 - ID4_ SINE ID -3 80 4 5 1564 355 218 125 10 chrX 128377359 128377466 -38272830 - PB1D9 SINE Alu -28 121 3 5 1564 309 283 21 2 chrX 128377913 128378006 -38272290 + ID4 SINE ID 7 99 -53 5 1564 274 102 33 17 chrX 128378292 128378352 -38271944 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 5 1564 755 192 196 62 chrX 128378968 128379388 -38270908 + RMER17C-int LTR ERVK 1513 1988 -1250 5 1564 824 177 43 0 chrX 128379394 128379558 -38270738 + RMER17C-int LTR ERVK 2172 2342 -896 5 1564 1048 120 143 20 chrX 128379556 128379752 -38270544 + RMER17C-int LTR ERVK 2533 2752 -486 5 1564 1987 179 55 38 chrX 128379768 128380187 -38270109 + RMER17C-int LTR ERVK 2806 3231 -7 5 1564 973 207 31 73 chrX 128380195 128380414 -38269882 + RMER17C LTR ERVK 85 404 -554 5 1564 1266 90 0 0 chrX 128380414 128380592 -38269704 + (TTCTC)n Simple_repeat Simple_repeat 3 180 0 5 1564 973 166 48 88 chrX 128380592 128380878 -38269418 + RMER17C LTR ERVK 114 401 -9 5 1564 896 262 24 5 chrX 128381579 128381790 -38268506 - ID_B1 SINE B4 -9 215 1 5 1564 1164 68 0 0 chrX 128383423 128383570 -38266726 + B1_Mm SINE Alu 1 147 0 5 1564 189 0 0 0 chrX 128383570 128383591 -38266705 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1564 511 273 29 29 chrX 128385589 128385759 -38264537 - Lx9 LINE L1 -648 6996 6827 5 1564 28 48 0 0 chrX 128386501 128386543 -38263753 + AT_rich Low_complexity Low_complexity 1 42 0 5 1564 257 354 0 0 chrX 128386770 128386849 -38263447 - ID4 SINE ID -3 80 2 5 1564 1430 235 75 22 chrX 128386972 128387333 -38262963 - MTD LTR MaLR -16 403 41 5 1564 1834 74 20 0 chrX 128387402 128387646 -38262650 - L1_Mus1 LINE L1 -9 6558 6310 5 1564 363 169 0 58 chrX 128388322 128388391 -38261905 + MT2B LTR ERVL 1 65 -536 5 1564 366 285 185 60 chrX 128388844 128389195 -38261101 + L1MEc LINE L1 2069 2463 -3937 5 1564 329 327 36 71 chrX 128389293 128389461 -38260835 + RSINE1 SINE B4 2 163 -2 5 1564 468 137 0 0 chrX 128389463 128389565 -38260731 + (CA)n Simple_repeat Simple_repeat 1 102 0 5 1564 1838 194 208 23 chrX 128389673 128390160 -38260136 - RLTR20B2 LTR ERVK 0 577 1 5 1564 290 297 16 0 chrX 128390629 128390693 -38259603 - ID4_ SINE ID -13 70 6 5 1564 3295 302 37 15 chrX 128391236 128392288 -38258008 - Lx8 LINE L1 -206 7267 6193 5 1564 24 0 0 0 chrX 128392289 128392313 -38257983 + AT_rich Low_complexity Low_complexity 1 24 0 5 1564 342 61 0 0 chrX 128392451 128392500 -38257796 + (TC)n Simple_repeat Simple_repeat 1 49 0 5 1564 210 118 0 0 chrX 128392514 128392548 -38257748 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 1564 769 273 33 25 chrX 128392649 128393074 -38257222 - Lx7 LINE L1 -1599 6045 5612 5 1564 765 303 51 75 chrX 128393258 128393593 -38256703 + MTE2a LTR MaLR 48 374 -5 5 1564 1132 285 56 22 chrX 128393875 128394230 -38256066 + MTD LTR MaLR 37 403 -16 5 1564 222 62 0 0 chrX 128394240 128394272 -38256024 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1564 267 222 0 48 chrX 128395996 128396020 -38254276 + T-rich Low_complexity Low_complexity 79 100 0 5 1564 1129 63 21 0 chrX 128396020 128396163 -38254133 - B1_Mm SINE Alu -1 146 1 5 1564 267 222 0 48 chrX 128396163 128396242 -38254054 + T-rich Low_complexity Low_complexity 3 78 0 5 1564 33478 91 7 7 chrX 128396422 128402567 -38247729 - L1Md_F2 LINE L1 -12 6570 446 5 1564 243 0 0 0 chrX 128403321 128403348 -38246948 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1564 5270 143 21 0 chrX 128403374 128404235 -38246061 - Lx2 LINE L1 0 6997 6119 5 1564 1149 207 65 25 chrX 128404917 128405194 -38245102 - MurERV4-int LTR ERVK -80 5180 4893 5 1564 4663 216 57 20 chrX 128405194 128406219 -38244077 - Lx5 LINE L1 -91 6959 5898 5 1564 1585 178 81 25 chrX 128406219 128406612 -38243684 - RLTR9F LTR ERVK 0 415 1 5 1564 402 123 40 14 chrX 128406612 128406686 -38243610 - ETnERV2-int LTR ERVK 0 7406 7331 5 1564 4145 176 7 30 chrX 128406902 128407811 -38242485 - ETnERV2-int LTR ERVK -1178 6228 5579 5 1564 443 132 29 0 chrX 128407801 128407869 -38242427 - ETnERV2-int LTR ERVK -2579 4665 4596 5 1564 8046 117 31 8 chrX 128407844 128409144 -38241152 - ETnERV2-int LTR ERVK -3308 4098 2768 5 1564 180 0 0 0 chrX 128409144 128409164 -38241132 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 6 1564 7920 49 4 1 chrX 128409180 128410314 -38239982 - L1Md_F3 LINE L1 -14 6570 5433 6 1564 850 160 64 0 chrX 128410314 128410470 -38239826 - ETnERV2-int LTR ERVK -4745 2661 2496 5 1564 5810 96 68 19 chrX 128410495 128411450 -38238846 - ETnERV2-int LTR ERVK -5321 2085 1083 5 1564 537 44 0 0 chrX 128411450 128411518 -38238778 + (TTTTA)n Simple_repeat Simple_repeat 4 71 0 6 1564 5810 220 55 13395 chrX 128411518 128411574 -38238722 - ETnERV2-int LTR ERVK -6324 1082 1078 5 1564 269 139 0 0 chrX 128411594 128411637 -38238659 - ETnERV2-int LTR ERVK -6293 1113 1071 5 1564 827 225 59 65 chrX 128411640 128411963 -38238333 - ETnERV2-int LTR ERVK -2991 323 3 5 1564 1464 180 81 28 chrX 128411965 128412359 -38237937 - RLTR9F LTR ERVK 0 415 1 5 1564 6281 163 5 16 chrX 128412379 128413530 -38236766 - Lx5 LINE L1 0 5877 4739 5 1564 2375 203 72 8 chrX 128413547 128413662 -38236634 - RMER1A Other Other -11 1019 879 6 1564 201 74 0 0 chrX 128413662 128413689 -38236607 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1564 2375 203 72 8 chrX 128413689 128414085 -38236211 - RMER1A Other Other -152 878 475 6 1564 1587 302 15 6 chrX 128414075 128414661 -38235635 + RMER1A Other Other 23 483 -547 6 1564 374 165 22 187 chrX 128414663 128414683 -38235613 + MTD LTR MaLR 8 25 -396 6 1564 2871 96 2 8 chrX 128414683 128415082 -38235214 - MTB LTR MaLR -3 397 1 6 1564 374 165 22 187 chrX 128415082 128415141 -38235155 + MTD LTR MaLR 26 80 -341 6 1564 1572 52 0 0 chrX 128415141 128415334 -38234962 + B2_Mm1a SINE B2 1 193 0 6 1564 374 165 22 187 chrX 128415334 128415387 -38234909 + MTD LTR MaLR 81 119 -302 6 1564 1530 69 5 0 chrX 128415389 128415592 -38234704 - L1_Mus1 LINE L1 0 6567 6364 6 1564 1463 56 0 0 chrX 128415597 128415776 -38234520 + L1_Mus1 LINE L1 6175 6353 -214 6 1564 1377 229 48 13 chrX 128415776 128416104 -38234192 + MTD LTR MaLR 76 411 -8 6 1564 314 306 122 27 chrX 128416187 128416375 -38233921 + L1MC4a LINE L1 5694 5899 -1983 6 1564 243 0 0 0 chrX 128417568 128417595 -38232701 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1564 453 369 42 42 chrX 128418537 128418800 -38231496 + MLT1F2 LTR MaLR 19 281 -279 6 1564 1814 228 46 8 chrX 128419472 128419865 -38230431 - MTD LTR MaLR 0 419 12 6 1564 287 369 91 32 chrX 128420346 128420500 -38229796 + RSINE1 SINE B4 3 165 0 6 1564 1144 216 17 0 chrX 128420557 128420788 -38229508 - Lx9 LINE L1 -421 7223 6989 6 1564 204 128 0 60 chrX 128420790 128420840 -38229456 + T-rich Low_complexity Low_complexity 3 49 0 6 1564 2410 229 101 11 chrX 128420871 128421484 -38228812 - Lx9 LINE L1 -801 6843 6176 6 1564 889 204 11 23 chrX 128422312 128422488 -38227808 + URR1B DNA MER1_type 1 174 -51 6 1564 397 250 141 0 chrX 128422524 128422652 -38227644 + B1_Mur2 SINE Alu 3 148 -1 6 1564 972 296 30 8 chrX 128422681 128422946 -38227350 + MTEa LTR MaLR 102 372 -7 6 1564 2641 144 27 63 chrX 128424486 128425012 -38225284 - RLTR28 LTR ERVL -16 508 2 6 1564 522 0 0 0 chrX 128425023 128425081 -38225215 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 1564 293 404 22 5 chrX 128428964 128429148 -38221148 + MIRb SINE MIR 23 209 -59 6 1564 236 347 0 14 chrX 128429148 128429221 -38221075 + B2_Mm2 SINE B2 2 73 -122 6 1564 333 0 0 0 chrX 128429230 128429267 -38221029 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 1564 4145 174 58 87 chrX 128429280 128430197 -38220099 - RMER19B LTR ERVK -11 891 2 6 1564 396 0 0 0 chrX 128430203 128430247 -38220049 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1564 561 347 46 46 chrX 128430948 128431253 -38219043 - Lx8 LINE L1 -5 7468 7164 6 1564 243 0 0 0 chrX 128431518 128431545 -38218751 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1564 333 307 10 0 chrX 128431709 128431810 -38218486 + RMER1C Other Other 27 128 -1214 6 1564 3126 261 48 39 chrX 128432044 128432848 -38217448 + RMER1C Other Other 527 1338 -4 6 1564 1596 314 20 38 chrX 128432855 128433467 -38216829 - Lx8 LINE L1 -318 7155 6555 6 1564 472 265 110 68 chrX 128433574 128433720 -38216576 - RSINE1 SINE B4 -3 162 11 6 1564 875 270 10 5 chrX 128433949 128434150 -38216146 + B3 SINE B2 11 212 -4 6 1564 228 254 0 33 chrX 128434176 128434237 -38216059 + MTEb LTR MaLR 318 376 -3 6 1564 423 232 36 53 chrX 128434429 128434464 -38215832 + MT2B LTR ERVL 154 287 -314 6 1564 851 76 8 8 chrX 128434464 128434583 -38215713 + B1_Mm SINE Alu 1 119 -28 6 1564 536 0 16 0 chrX 128434583 128434647 -38215649 + (GA)n Simple_repeat Simple_repeat 2 66 0 6 1564 423 265 7 81 chrX 128434647 128434663 -38215633 + MT2B LTR ERVL 276 290 -311 6 1564 199 109 17 52 chrX 128435352 128435410 -38214886 + A-rich Low_complexity Low_complexity 2 57 0 6 1564 462 36 0 0 chrX 128436990 128437046 -38213250 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1564 21 71 0 0 chrX 128438008 128438050 -38212246 + AT_rich Low_complexity Low_complexity 1 42 0 6 1564 706 283 14 14 chrX 128438138 128438353 -38211943 - B3 SINE B2 0 216 2 6 1564 219 377 14 0 chrX 128439373 128439442 -38210854 + PB1D10 SINE Alu 6 75 -42 6 1564 213 146 0 0 chrX 128439504 128439552 -38210744 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 1564 21 36 0 0 chrX 128440627 128440655 -38209641 + AT_rich Low_complexity Low_complexity 1 28 0 6 1564 504 48 0 0 chrX 128440704 128440767 -38209529 + (TA)n Simple_repeat Simple_repeat 1 63 0 6 1564 27 0 0 0 chrX 128442412 128442439 -38207857 + AT_rich Low_complexity Low_complexity 1 27 0 6 1564 453 279 108 0 chrX 128443483 128443594 -38206702 + RSINE1 SINE B4 2 124 -41 6 1564 333 0 0 0 chrX 128443594 128443631 -38206665 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1564 23 0 0 0 chrX 128444148 128444171 -38206125 + AT_rich Low_complexity Low_complexity 1 23 0 6 1564 690 185 94 22 chrX 128444362 128444500 -38205796 - B1_Mus1 SINE Alu 0 148 1 6 1564 518 346 28 18 chrX 128444881 128445099 -38205197 - Lx8 LINE L1 -444 7029 6810 6 1564 285 210 0 46 chrX 128445191 128445256 -38205040 + RMER15 LTR ERVL 4 65 -510 6 1564 1637 272 124 18 chrX 128445303 128445793 -38204503 + RMER15 LTR ERVL 32 573 -2 6 1564 3410 208 27 19 chrX 128445879 128446575 -38203721 + Lx5 LINE L1 6349 7050 0 6 1564 225 0 0 0 chrX 128446936 128446961 -38203335 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 6 1564 404 333 7 61 chrX 128449108 128449255 -38201041 + ID_B1 SINE B4 86 224 0 6 195 6113 149 28 11 chrX 128449780 128450778 -38199518 + Lx2 LINE L1 5908 6924 -73 6 1565 2567 81 44 5 chrX 128450778 128451163 -38199133 + MTB LTR MaLR 1 400 0 6 1565 7709 90 21 3 chrX 128451163 128452241 -38198055 + MTB-int LTR MaLR 1 1098 0 6 1565 2876 64 18 2 chrX 128452241 128452635 -38197661 + MTB LTR MaLR 1 400 0 6 1565 6113 149 28 11 chrX 128452635 128452706 -38197590 + Lx2 LINE L1 6925 6995 -2 6 1565 2421 120 11 19 chrX 128454901 128455275 -38195021 - Lx LINE L1 -14 6640 6270 6 1565 598 179 0 0 chrX 128455315 128455410 -38194886 - Lx LINE L1 -356 6298 6204 6 1565 245 366 22 11 chrX 128455792 128455905 -38194391 - MIRc SINE MIR -107 161 36 6 1565 356 343 41 55 chrX 128456221 128456349 -38193947 + B3A SINE B2 56 181 -17 6 1565 327 49 0 0 chrX 128456349 128456390 -38193906 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1565 356 343 41 55 chrX 128456390 128456406 -38193890 + B3A SINE B2 182 197 -1 6 1565 23 33 0 0 chrX 128457986 128458016 -38192280 + AT_rich Low_complexity Low_complexity 1 30 0 6 1565 365 356 61 28 chrX 128458832 128459225 -38191071 - L2 LINE L2 -571 2848 2443 6 1565 1150 82 0 0 chrX 128460201 128460348 -38189948 + B1_Mm SINE Alu 1 147 0 6 1565 291 54 0 0 chrX 128460348 128460385 -38189911 + (A)n Simple_repeat Simple_repeat 1 37 0 6 1565 182 65 65 0 chrX 128460841 128460872 -38189424 + (CATA)n Simple_repeat Simple_repeat 4 36 0 6 1565 189 0 0 0 chrX 128460901 128460922 -38189374 + (CTAAA)n Simple_repeat Simple_repeat 5 25 0 6 1565 416 312 58 7 chrX 128460948 128461103 -38189193 + RSINE1 SINE B4 3 165 0 6 1565 5196 140 2 4 chrX 128461621 128462431 -38187865 - Lx2 LINE L1 -4 6993 6185 6 1565 2492 52 0 0 chrX 128462707 128463014 -38187282 - L1Md_T LINE L1 -2 6580 6274 6 1565 3063 20 0 0 chrX 128463030 128463384 -38186912 + L1Md_A LINE L1 5587 5940 -642 6 1565 520 110 0 0 chrX 128464029 128464102 -38186194 - Lx3_Mus LINE L1 -403 6606 6534 6 1565 289 361 37 9 chrX 128464864 128464973 -38185323 + B4 SINE B4 17 128 -164 6 1565 405 0 0 0 chrX 128464984 128465029 -38185267 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1565 252 0 0 0 chrX 128465029 128465056 -38185240 + (TA)n Simple_repeat Simple_repeat 1 28 0 6 1565 419 0 20 0 chrX 128465056 128465107 -38185189 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 6 1565 1080 81 0 0 chrX 128465109 128465245 -38185051 - B1_Mus1 SINE Alu -12 136 1 6 1565 510 346 126 6 chrX 128465326 128465509 -38184787 - B4A SINE B4 -86 206 2 6 1565 225 211 35 0 chrX 128465556 128465613 -38184683 - B1F SINE Alu -6 143 85 6 1565 2532 138 0 15 chrX 128465765 128466169 -38184127 + Lx LINE L1 6237 6634 -20 6 1565 321 26 0 0 chrX 128466173 128466211 -38184085 + (GAAA)n Simple_repeat Simple_repeat 3 40 0 6 1565 693 36 0 0 chrX 128466211 128466294 -38184002 + (GAGAA)n Simple_repeat Simple_repeat 2 85 0 6 1565 3708 80 0 36 chrX 128468096 128468616 -38181680 - L1_Mus2 LINE L1 0 6566 6066 6 1565 24 0 0 0 chrX 128468649 128468673 -38181623 + AT_rich Low_complexity Low_complexity 1 24 0 6 1565 198 71 0 0 chrX 128468744 128468772 -38181524 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1565 247 200 20 0 chrX 128468792 128468842 -38181454 + GA-rich Low_complexity Low_complexity 4 54 0 6 1565 28 0 0 0 chrX 128469128 128469156 -38181140 + AT_rich Low_complexity Low_complexity 1 28 0 6 1565 651 270 77 43 chrX 128469265 128469474 -38180822 - B3 SINE B2 0 216 1 6 1565 414 57 0 0 chrX 128469489 128469542 -38180754 + (TA)n Simple_repeat Simple_repeat 2 54 0 6 1565 409 250 56 7 chrX 128469556 128469699 -38180597 - B3A SINE B2 -46 170 18 6 1565 463 77 0 0 chrX 128469765 128469830 -38180466 - L1_Mus2 LINE L1 -353 5530 5466 6 1565 7491 77 2 0 chrX 128469827 128470846 -38179450 + L1_Mus2 LINE L1 5545 6565 -1 6 1565 283 361 36 27 chrX 128470882 128470993 -38179303 + RSINE1 SINE B4 2 113 -52 6 1565 284 363 22 0 chrX 128471634 128471725 -38178571 + PB1D10 SINE Alu 1 93 -24 6 1565 291 290 0 132 chrX 128471885 128472036 -38178260 + MLT1A0 LTR MaLR 1 131 -234 6 1565 194 58 18 71 chrX 128472794 128472850 -38177446 + (CAAAAA)n Simple_repeat Simple_repeat 3 55 0 6 1565 655 236 263 0 chrX 128473050 128473345 -38176951 + ORR1D1 LTR MaLR 1 370 -4 6 1565 653 234 0 0 chrX 128473515 128473643 -38176653 - B3 SINE B2 -88 128 1 6 1565 23 0 0 0 chrX 128473732 128473755 -38176541 + AT_rich Low_complexity Low_complexity 1 23 0 6 1565 23 33 0 0 chrX 128475393 128475423 -38174873 + AT_rich Low_complexity Low_complexity 1 30 0 6 1565 570 130 0 0 chrX 128475423 128475531 -38174765 + (TG)n Simple_repeat Simple_repeat 1 108 0 6 1565 402 358 26 7 chrX 128475536 128475688 -38174608 - B3A SINE B2 -38 160 6 6 1565 24 32 0 0 chrX 128475773 128475804 -38174492 + AT_rich Low_complexity Low_complexity 1 31 0 7 1565 464 341 81 22 chrX 128477342 128477564 -38172732 - ORR1E LTR MaLR -21 349 115 7 1565 2611 213 22 19 chrX 128477564 128478142 -38172154 + Lx4B LINE L1 6476 7055 -3 7 1565 672 272 0 0 chrX 128478159 128478306 -38171990 - ORR1E LTR MaLR -206 153 7 7 1565 26 30 0 0 chrX 128478332 128478365 -38171931 + AT_rich Low_complexity Low_complexity 1 33 0 7 1565 640 107 259 0 chrX 128478744 128478856 -38171440 + B1_Mus1 SINE Alu 3 143 -5 7 1565 272 70 23 0 chrX 128478859 128478902 -38171394 + (GAAAA)n Simple_repeat Simple_repeat 1 44 0 7 1565 209 284 25 86 chrX 128478966 128479047 -38171249 + L2c LINE L2 3284 3359 -28 7 1565 382 99 0 53 chrX 128479277 128479352 -38170944 + (TA)n Simple_repeat Simple_repeat 2 72 0 7 1565 312 143 0 0 chrX 128479505 128479561 -38170735 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 1565 441 0 0 0 chrX 128479561 128479610 -38170686 + (GA)n Simple_repeat Simple_repeat 2 50 0 7 1565 423 125 0 0 chrX 128479690 128479762 -38170534 + (TG)n Simple_repeat Simple_repeat 2 73 0 7 1565 344 301 70 40 chrX 128479901 128480047 -38170249 + MLT1E3 LTR MaLR 59 270 -410 7 1565 279 246 0 14 chrX 128480047 128480121 -38170175 + ID4_ SINE ID 4 76 -7 7 1565 231 300 47 57 chrX 128480121 128480151 -38170145 + MLT1E3 LTR MaLR 271 301 -379 7 1565 498 96 0 0 chrX 128480161 128480234 -38170062 + (TG)n Simple_repeat Simple_repeat 1 73 0 7 1565 201 39 0 0 chrX 128481227 128481253 -38169043 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 1565 843 59 0 0 chrX 128481253 128481370 -38168926 + (GA)n Simple_repeat Simple_repeat 1 118 0 7 1565 429 20 0 0 chrX 128482636 128482686 -38167610 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1565 591 304 83 0 chrX 128482752 128482920 -38167376 + ID_B1 SINE B4 5 186 -38 7 1565 28 71 0 0 chrX 128485467 128485523 -38164773 + AT_rich Low_complexity Low_complexity 1 56 0 7 1565 243 0 0 0 chrX 128485914 128485941 -38164355 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1565 357 24 0 0 chrX 128488120 128488162 -38162134 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1565 355 322 11 17 chrX 128488895 128489072 -38161224 + CT-rich Low_complexity Low_complexity 1 176 0 7 1565 231 232 5 0 chrX 128489458 128489515 -38160781 + B4A SINE B4 67 126 -166 7 1565 1038 294 18 72 chrX 128489511 128489911 -38160385 + MLT1E1A LTR MaLR 288 665 -15 7 1565 582 305 79 114 chrX 128490245 128490981 -38159315 + Zaphod DNA Tip100 246 955 -3076 7 1565 302 344 99 16 chrX 128490984 128491297 -38158999 + MER58B DNA MER1_type 2 340 -1 7 1565 466 287 209 22 chrX 128491494 128492351 -38157945 - L1MA5A LINE L1 -375 5922 4815 7 1565 700 309 255 35 chrX 128492538 128492974 -38157322 + RMER5 LTR ERV1 3 534 0 7 1565 244 269 88 44 chrX 128493174 128493287 -38157009 + PB1D7 SINE Alu 3 120 0 7 1565 863 165 0 4 chrX 128493652 128493894 -38156402 + (TA)n Simple_repeat Simple_repeat 1 240 0 7 1565 384 357 81 25 chrX 128493941 128494102 -38156194 + ID_B1 SINE B4 9 178 -46 7 1565 315 0 0 0 chrX 128495069 128495104 -38155192 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 7 1565 7223 94 2 5 chrX 128495165 128496372 -38153924 - L1_Mus2 LINE L1 -1 6565 5362 7 1565 5525 166 22 31 chrX 128496374 128497607 -38152689 + L1Md_F LINE L1 99 1205 -5411 7 1565 18704 45 0 0 chrX 128497613 128500000 -38150296 + L1Md_F LINE L1 1170 3557 -2326 7 1565 17534 17 0 0 chrX 128500000 128502029 -38148267 + L1Md_T LINE L1 3558 5586 -297 1 1565 8021 54 0 0 chrX 128502029 128503025 -38147271 + L1Md_T LINE L1 5587 6582 0 1 1565 2572 122 4 64 chrX 128503029 128503130 -38147166 - L1_Mm LINE L1 -507 5376 5296 2 1565 1174 61 0 0 chrX 128503130 128503277 -38147019 - B1_Mm SINE Alu 0 147 1 3 1565 2572 122 4 64 chrX 128503277 128503631 -38146665 - L1_Mm LINE L1 -588 5295 4948 2 1565 904 126 0 14 chrX 128505109 128505254 -38145042 + URR1B DNA MER1_type 83 225 0 4 1565 4532 31 7 0 chrX 128505591 128506133 -38144163 - L1Md_F3 LINE L1 -15 6569 6024 5 1565 330 333 128 23 chrX 128506326 128506531 -38143765 + MIRb SINE MIR 4 224 -44 6 1565 475 294 44 0 chrX 128507853 128507989 -38142307 - B1_Mur1 SINE Alu -5 144 3 7 1565 471 141 0 0 chrX 128508232 128508310 -38141986 + (GGA)n Simple_repeat Simple_repeat 2 79 0 8 1565 1221 106 0 0 chrX 128508310 128508490 -38141806 + (GAA)n Simple_repeat Simple_repeat 1 180 0 9 1565 23 33 0 0 chrX 128510560 128510590 -38139706 + AT_rich Low_complexity Low_complexity 1 30 0 1 1565 35315 46 0 3 chrX 128512283 128517736 -38132560 + L1Md_T LINE L1 57 5588 -298 1 1565 8250 42 0 0 chrX 128517737 128518732 -38131564 + L1Md_T LINE L1 5590 6584 -1 1 1565 647 133 0 17 chrX 128518744 128518859 -38131437 + CT-rich Low_complexity Low_complexity 2 114 0 1 1565 1101 90 0 0 chrX 128518860 128519005 -38131291 - B1_Mm SINE Alu 0 147 3 1 1565 306 0 0 0 chrX 128519368 128519402 -38130894 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1565 660 282 155 19 chrX 128519428 128519912 -38130384 + Lx9 LINE L1 7087 7636 -8 1 1565 247 104 42 0 chrX 128519918 128519966 -38130330 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 1565 241 226 16 16 chrX 128519979 128520042 -38130254 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 1 1565 319 242 76 57 chrX 128521777 128521882 -38128414 + ORR1D1 LTR MaLR 1 107 -267 1 1565 540 56 0 0 chrX 128521887 128521959 -38128337 + (TC)n Simple_repeat Simple_repeat 1 72 0 1 1565 552 290 57 36 chrX 128521970 128522163 -38128133 + ORR1D1 LTR MaLR 175 371 -3 1 1565 4556 62 15 0 chrX 128522658 128523251 -38127045 + L1Md_F2 LINE L1 5980 6581 -1 2 1565 6217 152 7 1 chrX 128523390 128523892 -38126404 - L1_Mm LINE L1 -19 5864 5362 2 1565 2720 89 5 46 chrX 128523892 128524304 -38125992 - L1_Mus3 LINE L1 0 6638 6244 2 1565 6217 152 7 1 chrX 128524304 128524841 -38125455 - L1_Mm LINE L1 -522 5361 4820 2 1565 4390 123 83 16 chrX 128524841 128525476 -38124820 + Lx LINE L1 5854 6518 -136 2 1565 405 0 0 0 chrX 128525476 128525521 -38124775 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1565 4390 123 83 16 chrX 128525521 128525636 -38124660 + Lx LINE L1 6519 6653 -1 2 1565 200 205 0 0 chrX 128525661 128525700 -38124596 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 2 1565 464 340 24 48 chrX 128525705 128525872 -38124424 - RSINE1 SINE B4 0 165 3 2 1565 26 50 0 0 chrX 128526654 128526694 -38123602 + AT_rich Low_complexity Low_complexity 1 40 0 2 1565 606 148 0 0 chrX 128527428 128527543 -38122753 + (TA)n Simple_repeat Simple_repeat 1 115 0 2 1565 2766 93 0 0 chrX 128527619 128528004 -38122292 - L1_Mm LINE L1 -370 5513 5129 2 1565 893 72 0 0 chrX 128528006 128528131 -38122165 + L1_Mus1 LINE L1 6434 6558 -9 3 1565 35304 36 0 0 chrX 128528131 128533361 -38116935 + L1Md_T LINE L1 263 5589 -297 3 1565 8651 8 16 2 chrX 128533361 128534343 -38115953 + L1Md_T LINE L1 5590 6585 0 3 1565 249 215 15 15 chrX 128534715 128534781 -38115515 + CT-rich Low_complexity Low_complexity 2 67 0 3 1565 253 344 0 86 chrX 128534793 128534898 -38115398 - ID_B1 SINE B4 -1 223 128 3 1565 696 35 0 0 chrX 128535167 128535254 -38115042 + (GA)n Simple_repeat Simple_repeat 2 88 0 3 1565 1130 117 0 6 chrX 128535254 128535434 -38114862 + (GAA)n Simple_repeat Simple_repeat 2 180 0 3 1565 248 0 31 0 chrX 128535440 128535472 -38114824 + (GGAGAA)n Simple_repeat Simple_repeat 5 37 0 3 1565 217 151 37 19 chrX 128535809 128535863 -38114433 + T-rich Low_complexity Low_complexity 4 58 0 3 1565 4308 153 17 39 chrX 128538266 128538595 -38111701 - RMER17D2 LTR ERVK 0 809 497 3 1565 3241 61 15 0 chrX 128538595 128539006 -38111290 + L1_Mus1 LINE L1 6151 6567 0 3 1565 4308 153 17 39 chrX 128539006 128539503 -38110793 - RMER17D2 LTR ERVK -313 496 1 3 1565 348 286 10 30 chrX 128540442 128540543 -38109753 + PB1D7 SINE Alu 20 118 -2 4 1565 627 14 0 0 chrX 128541113 128541185 -38109111 + (CA)n Simple_repeat Simple_repeat 2 73 0 4 1565 1825 75 8 8 chrX 128541334 128541590 -38108706 - L1_Mus3 LINE L1 -7 6631 6376 4 1565 601 30 19 29 chrX 128541590 128541693 -38108603 + (TTTTTG)n Simple_repeat Simple_repeat 2 103 0 4 1565 2590 73 6 0 chrX 128541694 128542036 -38108260 - L1_Mus3 LINE L1 -257 6381 6038 4 1565 227 338 0 0 chrX 128542104 128542184 -38108112 + L1MC3 LINE L1 7677 7756 -29 4 1565 408 99 0 0 chrX 128542392 128542463 -38107833 + (T)n Simple_repeat Simple_repeat 1 71 0 4 1565 348 337 47 19 chrX 128543881 128544093 -38106203 + L1MC4a LINE L1 5613 5830 -2052 4 1565 183 42 0 0 chrX 128544199 128544223 -38106073 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1565 695 340 77 24 chrX 128544391 128544731 -38105565 + ORR1E LTR MaLR 2 359 0 4 1565 441 36 0 0 chrX 128544976 128545031 -38105265 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1565 401 314 87 26 chrX 128545256 128545485 -38104811 + L1M5 LINE L1 5147 5389 -757 5 1565 1068 83 0 0 chrX 128545625 128545769 -38104527 + B1_Mus1 SINE Alu 5 148 0 5 1565 354 283 47 0 chrX 128546518 128546624 -38103672 + MIRc SINE MIR 42 152 -116 5 1565 21 0 0 0 chrX 128546731 128546752 -38103544 + AT_rich Low_complexity Low_complexity 1 21 0 5 1565 513 305 50 81 chrX 128547053 128547274 -38103022 + B3 SINE B2 1 214 -2 5 1565 21 36 0 0 chrX 128548532 128548560 -38101736 + AT_rich Low_complexity Low_complexity 1 28 0 5 1565 26 0 0 0 chrX 128548790 128548816 -38101480 + AT_rich Low_complexity Low_complexity 1 26 0 5 1565 27 100 0 0 chrX 128549020 128549110 -38101186 + AT_rich Low_complexity Low_complexity 1 90 0 5 1565 567 188 0 0 chrX 128549617 128549729 -38100567 + (TA)n Simple_repeat Simple_repeat 2 113 0 5 1565 1628 221 90 75 chrX 128549783 128550182 -38100114 + RMER1C Other Other 822 1229 -113 5 1565 1158 112 0 0 chrX 128550182 128550360 -38099936 + (TTC)n Simple_repeat Simple_repeat 3 180 0 6 1565 1628 221 90 75 chrX 128550360 128550469 -38099827 + RMER1C Other Other 1230 1338 -4 5 1565 2839 109 63 0 chrX 128550510 128550940 -38099356 - Lx LINE L1 -200 6454 5998 6 1565 213 178 0 0 chrX 128550941 128550986 -38099310 + (TTA)n Simple_repeat Simple_repeat 1 45 0 6 1565 7276 79 8 0 chrX 128550992 128552215 -38098081 - L1_Mus2 LINE L1 -2 6564 5332 6 1565 204 67 0 0 chrX 128552229 128552259 -38098037 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1565 4170 143 8 0 chrX 128552259 128553139 -38097157 - Lx LINE L1 -638 6016 5130 6 1565 1025 177 5 25 chrX 128553125 128553322 -38096974 - Lx6 LINE L1 -854 6606 6414 6 1565 3877 163 27 3 chrX 128553353 128554012 -38096284 - Lx3B LINE L1 -4 6969 6295 6 1565 733 81 81 0 chrX 128554036 128554147 -38096149 - B1_Mm SINE Alu 0 147 28 6 1565 2985 16 5 136 chrX 128554147 128554596 -38095700 + RLTR10 LTR ERVK 1 390 0 6 1565 247 226 107 0 chrX 128554600 128554684 -38095612 - Lx3B LINE L1 -832 6141 6049 6 1565 310 283 21 11 chrX 128554894 128554987 -38095309 - Lx8 LINE L1 -303 7170 7077 6 1565 24 0 0 0 chrX 128555126 128555150 -38095146 + AT_rich Low_complexity Low_complexity 1 24 0 7 1565 279 190 0 0 chrX 128555244 128555302 -38094994 + T-rich Low_complexity Low_complexity 1 58 0 7 1565 1010 110 14 0 chrX 128555302 128555448 -38094848 - B1_Mus1 SINE Alu 0 148 1 7 1565 263 294 101 38 chrX 128557505 128557653 -38092643 + L1MB7 LINE L1 5711 5877 -301 7 1565 1138 223 205 6 chrX 128557653 128557965 -38092331 - ORR1D1 LTR MaLR 0 374 1 7 1565 534 292 22 131 chrX 128557965 128558301 -38091995 + L1MB7 LINE L1 5878 6175 -9 7 1565 403 336 26 0 chrX 128558353 128558466 -38091830 + PB1D10 SINE Alu 1 116 -1 7 1565 348 0 0 55 chrX 128558471 128558526 -38091770 + (CAAAA)n Simple_repeat Simple_repeat 4 55 0 7 1565 591 228 0 9 chrX 128558530 128558645 -38091651 + B1_Mur1 SINE Alu 1 114 -35 7 1565 39405 27 2 6 chrX 128558763 128564968 -38085328 - L1Md_A LINE L1 0 6582 406 7 1565 934 306 64 18 chrX 128565351 128565681 -38084615 + MTE2a LTR MaLR 34 378 -1 7 1565 198 0 0 0 chrX 128566103 128566125 -38084171 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1565 188 135 27 0 chrX 128566534 128566571 -38083725 + (TA)n Simple_repeat Simple_repeat 2 39 0 8 1565 730 328 70 16 chrX 128566580 128566847 -38083449 + ORR1E LTR MaLR 1 269 -101 8 1565 1169 265 110 13 chrX 128566847 128567229 -38083067 - MTD LTR MaLR 0 419 1 8 1565 729 257 229 9 chrX 128567659 128567870 -38082426 + Lx9 LINE L1 7259 7516 -128 8 1565 199 72 23 23 chrX 128567870 128567913 -38082383 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 1565 255 226 21 83 chrX 128567913 128568047 -38082249 + Lx9 LINE L1 7517 7642 -2 8 1565 444 341 27 27 chrX 128568228 128568261 -38082035 - B3A SINE B2 -3 195 165 8 1565 498 46 0 0 chrX 128568261 128568326 -38081970 + (TG)n Simple_repeat Simple_repeat 2 66 0 8 1565 444 341 27 27 chrX 128568326 128568479 -38081817 - B3A SINE B2 -34 164 9 8 1565 439 288 48 0 chrX 128568531 128568656 -38081640 + ID_B1 SINE B4 88 218 -6 8 1565 387 0 0 0 chrX 128568997 128569040 -38081256 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 1565 312 301 226 20 chrX 128570192 128570338 -38079958 + B3A SINE B2 7 182 -16 9 1565 33558 84 12 5 chrX 128571303 128577246 -38073050 - L1Md_F2 LINE L1 -5 6577 397 9 1565 468 342 20 35 chrX 128577269 128577469 -38072827 - B3A SINE B2 -1 197 1 9 1565 1592 254 107 26 chrX 128577718 128578449 -38071847 - L1MB8 LINE L1 -6 6172 5383 9 1565 24 0 0 0 chrX 128578460 128578484 -38071812 + AT_rich Low_complexity Low_complexity 1 24 0 9 1565 5666 97 6 1 chrX 128578545 128579343 -38070953 - L1_Mus4 LINE L1 -3 6633 5832 9 1565 252 286 18 0 chrX 128579558 128579614 -38070682 - B4A SINE B4 -131 161 105 9 1565 809 263 48 14 chrX 128579943 128580151 -38070145 + B3 SINE B2 2 216 0 9 1565 2001 247 54 20 chrX 128580293 128580905 -38069391 - Lx9 LINE L1 -7 7637 7005 9 1565 392 374 38 8 chrX 128580944 128581211 -38069085 - L1M4b LINE L1 -6279 1055 781 9 195 3553 164 50 32 chrX 128581236 128581979 -38068317 + RMER6A LTR ERVK 1 756 0 1 1566 568 393 21 0 chrX 128582101 128582427 -38067869 - L1M4b LINE L1 -6872 462 130 9 1566 247 203 24 98 chrX 128582815 128582897 -38067399 + ORR1E LTR MaLR 247 322 -37 1 1566 354 23 0 0 chrX 128583390 128583433 -38066863 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1 1566 411 340 84 62 chrX 128583464 128583881 -38066415 + L1MC5 LINE L1 6676 7101 -860 1 1566 528 331 71 50 chrX 128584025 128584403 -38065893 + MT2A LTR ERVL 142 527 -6 1 1566 770 282 51 8 chrX 128584584 128584820 -38065476 - RMER1C Other Other -30 1312 1067 1 1566 338 109 62 15 chrX 128585075 128585140 -38065156 - RLTR9D LTR ERVK 0 409 342 1 1566 755 106 16 16 chrX 128585118 128585243 -38065053 - RLTR9D LTR ERVK -278 125 1 1 1566 349 304 147 17 chrX 128585243 128585420 -38064876 + RMER1B Other Other 223 422 -644 1 1566 897 308 113 22 chrX 128585855 128586307 -38063989 + L1MB4 LINE L1 2625 3116 -3030 1 1566 1960 92 7 0 chrX 128586307 128586588 -38063708 + L1_Mus1 LINE L1 6285 6567 0 1 1566 897 308 113 22 chrX 128586588 128586896 -38063400 + L1MB4 LINE L1 3117 3454 -2692 1 1566 334 366 107 37 chrX 128587267 128587565 -38062731 + L1MB4 LINE L1 3664 3982 -2164 1 1566 1389 349 94 36 chrX 128587785 128588538 -38061758 + MER54A LTR ERVL 4 800 -101 1 1566 413 216 11 7 chrX 128588883 128588976 -38061320 + L1MB4 LINE L1 5516 5606 -568 1 1566 894 217 167 5 chrX 128588976 128589198 -38061098 + Lx9 LINE L1 7119 7376 -268 1 1566 198 0 0 0 chrX 128589234 128589256 -38061040 + (TATAA)n Simple_repeat Simple_repeat 1 22 0 1 1566 818 283 44 34 chrX 128589279 128589609 -38060687 + L1MB4 LINE L1 5596 5930 -250 1 1566 2505 26 69 0 chrX 128589609 128589914 -38060382 + IAPLTR3 LTR ERVK 1 326 0 1 1566 818 283 44 34 chrX 128589914 128589971 -38060325 + L1MB4 LINE L1 5931 5987 -193 1 1566 3766 190 34 39 chrX 128590054 128590710 -38059586 - RMER19B LTR ERVK -8 894 243 1 1566 369 0 53 18 chrX 128590710 128590767 -38059529 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 1 1566 3766 190 34 39 chrX 128590767 128590886 -38059410 - RMER19B LTR ERVK -660 242 124 1 1566 392 370 28 0 chrX 128590966 128591147 -38059149 + RMER30 DNA MER1_type 10 195 -7 1 1566 255 204 27 102 chrX 128591192 128591288 -38059008 - MTEb LTR MaLR -8 371 269 1 1566 228 35 0 0 chrX 128591319 128591348 -38058948 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1566 342 0 0 0 chrX 128591887 128591925 -38058371 + (A)n Simple_repeat Simple_repeat 1 38 0 1 1566 269 338 71 0 chrX 128591929 128592083 -38058213 + L1M5 LINE L1 4781 4945 -1201 1 1566 3815 20 0 0 chrX 128592406 128592850 -38057446 - L1_Mm LINE L1 -302 5581 5138 1 1566 3358 5 0 0 chrX 128592850 128593229 -38057067 + L1Md_T LINE L1 6204 6582 0 1 1566 1037 316 25 56 chrX 128593291 128593646 -38056650 + MTE2b LTR MaLR 32 375 -4 1 1566 971 298 71 9 chrX 128593650 128593843 -38056453 + MTE2b-int LTR MaLR 1 196 -1384 1 1566 474 18 0 0 chrX 128593843 128593898 -38056398 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 1566 971 298 71 9 chrX 128593898 128594043 -38056253 + MTE2b-int LTR MaLR 197 359 -1221 1 1566 2222 227 59 22 chrX 128594043 128594759 -38055537 - L1_Mur3 LINE L1 -1529 4351 3610 1 1566 928 217 43 5 chrX 128594941 128595149 -38055147 + MTEa LTR MaLR 164 379 0 1 1566 388 246 91 6 chrX 128595305 128595481 -38054815 + Charlie1b DNA MER1_type 290 480 -43 1 1566 343 319 149 29 chrX 128595584 128595865 -38054431 + L1M5 LINE L1 5039 5353 -793 1 1566 229 328 94 52 chrX 128596838 128597050 -38053246 - MIR SINE MIR -1 261 41 1 1566 22 70 0 0 chrX 128597054 128597097 -38053199 + AT_rich Low_complexity Low_complexity 1 43 0 1 1566 289 338 36 29 chrX 128597102 128597242 -38053054 - B1_Mur2 SINE Alu -8 141 1 1 1566 313 353 17 0 chrX 128597321 128597437 -38052859 - ID_B1 SINE B4 0 224 107 1 1566 243 352 55 0 chrX 128597466 128597594 -38052702 - B1F SINE Alu -2 147 13 1 1566 28 0 0 0 chrX 128598195 128598223 -38052073 + AT_rich Low_complexity Low_complexity 1 28 0 1 1566 300 347 56 46 chrX 128598387 128598671 -38051625 - L1M5 LINE L1 -442 5682 5396 1 1566 21 0 0 0 chrX 128598839 128598860 -38051436 + AT_rich Low_complexity Low_complexity 1 21 0 1 1566 507 304 158 10 chrX 128598860 128599378 -38050918 + Zaphod DNA Tip100 376 970 -3061 1 1566 182 37 37 0 chrX 128599400 128599427 -38050869 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 1566 28 0 0 0 chrX 128599703 128599731 -38050565 + AT_rich Low_complexity Low_complexity 1 28 0 1 1566 408 300 138 0 chrX 128599948 128600078 -38050218 + B1F2 SINE Alu 1 148 -1 1 1566 405 0 0 0 chrX 128600159 128600204 -38050092 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 1566 3610 202 67 26 chrX 128600466 128601306 -38048990 - RMER13B LTR ERVK -34 874 1 1 1566 531 326 43 43 chrX 128601341 128601642 -38048654 + RMER5 LTR ERV1 111 411 -123 1 1566 348 316 97 23 chrX 128601855 128602030 -38048266 - RMER15 LTR ERVL -14 561 374 1 1566 266 310 0 91 chrX 128602051 128602161 -38048135 - Lx8 LINE L1 -342 7131 7032 1 1566 243 0 0 0 chrX 128602208 128602235 -38048061 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1566 4739 94 29 1 chrX 128602459 128603143 -38047153 + L1_Mus3 LINE L1 5929 6631 -7 1 1566 760 301 88 43 chrX 128603236 128603702 -38046594 - Arthur1 DNA Tip100 -314 3633 3147 1 1566 4197 212 99 14 chrX 128603702 128604753 -38045543 - Lx2B LINE L1 -10 6990 5851 1 1566 29959 112 11 7 chrX 128604753 128610281 -38040015 + L1_Mus1 LINE L1 1006 6567 0 1 1566 21 0 0 0 chrX 128610282 128610303 -38039993 + AT_rich Low_complexity Low_complexity 1 21 0 1 1566 621 318 68 87 chrX 128610415 128610828 -38039468 + Lx8 LINE L1 7060 7464 -9 1 1566 196 30 61 0 chrX 128614193 128614226 -38036070 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 1 1566 240 64 42 21 chrX 128614344 128614392 -38035904 + (TTTC)n Simple_repeat Simple_repeat 4 52 0 1 1566 20185 174 41 53 chrX 128614563 128618819 -38031477 + Lx3_Mus LINE L1 721 5052 -1957 1 1566 948 89 6 131 chrX 128618819 128618987 -38031309 + B1_Mus2 SINE Alu 1 147 0 1 1566 20185 174 41 53 chrX 128618987 128619823 -38030473 + Lx3_Mus LINE L1 5053 5905 -1104 1 1566 306 73 0 0 chrX 128619823 128619864 -38030432 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 1 1566 9141 109 37 6 chrX 128619864 128620934 -38029362 + Lx3_Mus LINE L1 5906 7007 -2 1 1566 181 0 0 65 chrX 128620943 128620974 -38029322 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1566 5795 138 60 3 chrX 128620977 128621987 -38028309 + Lx2 LINE L1 5929 6996 -1 1 1566 241 351 36 51 chrX 128622208 128622346 -38027950 + RMER12 LTR ERVK 736 871 -451 1 1566 306 299 136 11 chrX 128623069 128623245 -38027051 - L2a LINE L2 -3 3423 3226 1 1566 260 334 75 71 chrX 128623558 128623938 -38026358 - MTEb LTR MaLR 0 379 1 1 1566 384 377 74 48 chrX 128623938 128624285 -38026011 + MLT1H LTR MaLR 59 414 -135 1 1566 2046 191 47 5 chrX 128624375 128624776 -38025520 - MTC LTR MaLR -3 418 1 1 1566 258 136 0 0 chrX 128625107 128625151 -38025145 + (TTA)n Simple_repeat Simple_repeat 3 46 0 1 1566 306 0 0 0 chrX 128625151 128625185 -38025111 + (TAG)n Simple_repeat Simple_repeat 1 34 0 1 1566 330 313 0 0 chrX 128625187 128625270 -38025026 - B1_Mur2 SINE Alu -18 131 49 1 1566 219 303 162 70 chrX 128625270 128625329 -38024967 - ID_B1 SINE B4 -18 206 52 1 1566 23 0 0 0 chrX 128626015 128626038 -38024258 + AT_rich Low_complexity Low_complexity 1 23 0 1 1566 598 239 0 90 chrX 128627150 128627316 -38022980 - Lx9 LINE L1 -529 7115 6965 1 1566 303 162 0 0 chrX 128627485 128627565 -38022731 + A-rich Low_complexity Low_complexity 1 80 0 1 1566 2065 186 302 5 chrX 128627915 128628784 -38021512 + L1_Mur2 LINE L1 904 2049 -3828 1 1566 379 35 0 34 chrX 128628784 128628843 -38021453 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1566 2065 183 294 7 chrX 128628843 128628919 -38021377 + L1_Mur2 LINE L1 2050 2129 -3748 1 1566 182 318 51 43 chrX 128628930 128629068 -38021228 + MIRc SINE MIR 126 264 -4 1 1566 22 0 0 0 chrX 128629656 128629678 -38020618 + AT_rich Low_complexity Low_complexity 1 22 0 1 1566 231 188 0 0 chrX 128631551 128631599 -38018697 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1566 2317 70 13 0 chrX 128631838 128632152 -38018144 + L1_Mus3 LINE L1 6318 6635 -3 1 1566 270 81 0 0 chrX 128632189 128632226 -38018070 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 1 1566 564 329 15 16 chrX 128635983 128636194 -38014102 + B3A SINE B2 3 216 0 1 1566 447 19 0 0 chrX 128636553 128636605 -38013691 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 1566 207 0 0 0 chrX 128636757 128636780 -38013516 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 1566 360 176 0 0 chrX 128637266 128637334 -38012962 + A-rich Low_complexity Low_complexity 1 68 0 1 1566 374 283 53 47 chrX 128637609 128637928 -38012368 + L1MD LINE L1 2743 3063 -3083 1 1566 16458 170 26 2 chrX 128638365 128638490 -38011806 + Lx2 LINE L1 2666 2790 -3093 1 1566 288 0 0 0 chrX 128638490 128638522 -38011774 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 1 1566 16458 182 37 12 chrX 128638522 128642621 -38007675 + Lx2 LINE L1 2791 6997 0 1 1566 423 338 82 16 chrX 128642738 128642982 -38007314 + L1MC LINE L1 3769 4028 -2118 1 1566 14900 174 12 11 chrX 128643772 128646933 -38003363 - L1VL4 LINE L1 -1635 4248 1071 1 1566 1321 88 16 11 chrX 128646933 128647117 -38003179 + B2_Mm2 SINE B2 2 186 -9 1 1566 2805 126 12 62 chrX 128647117 128647358 -38002938 - L1VL4 LINE L1 -5587 1070 856 1 1566 2487 147 5 5 chrX 128647358 128647769 -38002527 + Lx LINE L1 6242 6652 -2 1 1566 1570 192 9 29 chrX 128648220 128648536 -38001760 + Lx4A LINE L1 6749 7058 0 1 1566 954 200 75 9 chrX 128648597 128648809 -38001487 + URR1A DNA MER1_type 1 226 0 1 1566 349 314 70 35 chrX 128649067 128649295 -38001001 + L1M2 LINE L1 2588 2823 -3320 1 1566 1026 109 7 0 chrX 128649314 128649461 -38000835 + B1_Mus1 SINE Alu 1 148 0 1 1566 551 306 16 16 chrX 128649746 128649926 -38000370 + MTC LTR MaLR 9 211 -210 1 1566 542 99 0 0 chrX 128649933 128650004 -38000292 + Lx4A LINE L1 6762 6832 -226 1 1566 1723 237 76 25 chrX 128650015 128650461 -37999835 + Lx2B LINE L1 6507 6975 -25 1 1566 330 251 121 58 chrX 128650464 128650618 -37999678 + MTC LTR MaLR 185 385 -34 1 1566 473 302 55 47 chrX 128650618 128650815 -37999481 + L1M2 LINE L1 3905 4103 -2037 1 1566 1868 180 16 18 chrX 128650815 128651195 -37999101 - Lx LINE L1 -8 6646 6268 1 1566 473 302 55 47 chrX 128651195 128651341 -37998955 + L1M2 LINE L1 4104 4251 -1889 1 1566 4906 97 8 19 chrX 128651353 128652072 -37998224 + L1_Mus3 LINE L1 5926 6636 -2 1 1566 786 93 0 0 chrX 128652091 128652198 -37998098 - Lx3_Mus LINE L1 -704 6305 6199 1 1566 4701 98 26 0 chrX 128652198 128652882 -37997414 + Lx3_Mus LINE L1 6308 7009 0 1 1566 281 293 30 0 chrX 128653311 128653410 -37996886 + L1M2 LINE L1 4444 4545 -1598 1 1566 698 203 0 40 chrX 128653431 128653443 -37996853 - B1_Mur3 SINE Alu -2 147 138 1 1566 846 98 0 0 chrX 128653443 128653565 -37996731 + (TTCTC)n Simple_repeat Simple_repeat 4 125 0 2 1566 698 203 0 40 chrX 128653565 128653701 -37996595 - B1_Mur3 SINE Alu -12 137 5 1 1566 2332 113 44 36 chrX 128653800 128654212 -37996084 + RLTR9F LTR ERVK 1 415 0 2 1566 661 302 28 14 chrX 128654290 128654575 -37995721 + L1M2 LINE L1 4693 4981 -1162 1 1566 620 295 61 35 chrX 128654710 128655183 -37995113 + L1M2 LINE L1 5284 5791 -512 1 1566 330 194 0 0 chrX 128655186 128655258 -37995038 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 1566 712 283 75 40 chrX 128655529 128656059 -37994237 + L1MD3 LINE L1 4536 5084 -1062 2 1566 968 270 50 17 chrX 128656276 128656692 -37993604 + L1MD3 LINE L1 5379 5823 -356 2 1566 3954 69 6 0 chrX 128656693 128657198 -37993098 - L1_Mus1 LINE L1 -452 6115 5608 2 1566 3345 87 0 0 chrX 128657198 128657687 -37992609 + L1_Mus1 LINE L1 6117 6567 0 2 1566 314 342 29 26 chrX 128657731 128658101 -37992195 + L1MD3 LINE L1 7866 7981 -14 2 1566 2211 219 137 11 chrX 128658412 128659071 -37991225 + Lx9 LINE L1 6902 7643 -1 2 1566 7390 74 9 1 chrX 128659217 128660193 -37990103 + L1Md_F2 LINE L1 5587 6570 -12 2 1566 212 0 36 0 chrX 128660203 128660231 -37990065 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 1566 554 267 48 5 chrX 128660610 128660798 -37989498 + L1M5 LINE L1 3472 3667 -2479 2 1566 398 299 70 47 chrX 128660807 128661021 -37989275 - MER58B DNA MER1_type -2 339 121 2 1566 911 212 32 51 chrX 128661338 128661591 -37988705 - RMER16 LTR ERVK 0 533 286 2 1566 249 233 10 109 chrX 128661610 128661711 -37988585 - RMER16 LTR ERVK -186 347 257 2 1566 283 228 12 48 chrX 128661700 128661783 -37988513 - RMER16 LTR ERVK -453 80 1 2 1566 245 51 26 0 chrX 128662641 128662680 -37987616 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 2 1566 830 102 8 0 chrX 128662681 128662799 -37987497 - B1_Mus1 SINE Alu 0 148 30 2 1566 21 36 0 0 chrX 128663118 128663146 -37987150 + AT_rich Low_complexity Low_complexity 1 28 0 2 1566 343 272 80 0 chrX 128663766 128663891 -37986405 - L1MA10 LINE L1 -8 6326 6192 2 1566 883 142 11 69 chrX 128663997 128664171 -37986125 - RMER6B LTR ERVK 0 461 298 2 1566 8152 112 17 28 chrX 128664182 128665480 -37984816 - Lx3_Mus LINE L1 -8 7001 5718 2 1566 536 201 99 197 chrX 128665530 128665753 -37984543 - RMER6B LTR ERVK -260 201 1 2 1566 307 336 89 4 chrX 128665837 128666025 -37984271 - L1MD LINE L1 -367 5812 5612 2 1566 600 308 11 29 chrX 128666433 128666585 -37983711 + B3A SINE B2 14 163 -35 2 1566 7082 19 2 23 chrX 128666585 128667424 -37982872 + RLTR13B2 LTR ERVK 1 822 0 2 1566 600 324 13 38 chrX 128667424 128667477 -37982819 + B3A SINE B2 164 212 -4 2 1566 324 277 65 89 chrX 128667535 128667658 -37982638 + RSINE1 SINE B4 2 121 -44 2 1566 735 173 125 25 chrX 128667661 128667821 -37982475 + ORR1B1 LTR MaLR 1 176 -218 2 1566 737 302 37 29 chrX 128667821 128668196 -37982100 + L1M2 LINE L1 4638 5015 -1128 2 1566 379 336 53 46 chrX 128668196 128668477 -37981819 - L1MEd LINE L1 -5245 874 592 2 1566 701 303 48 5 chrX 128668829 128669018 -37981278 - B3 SINE B2 -12 204 8 2 1566 21 0 0 0 chrX 128669492 128669513 -37980783 + AT_rich Low_complexity Low_complexity 1 21 0 2 1566 40 59 0 0 chrX 128670716 128670784 -37979512 + AT_rich Low_complexity Low_complexity 1 68 0 2 1566 305 238 58 18 chrX 128670817 128671030 -37979266 + (CATATA)n Simple_repeat Simple_repeat 1 221 0 2 1566 387 0 0 0 chrX 128671043 128671086 -37979210 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1566 6263 67 92 19 chrX 128671091 128672010 -37978286 - L1_Mus2 LINE L1 0 6654 5587 2 1566 254 250 33 0 chrX 128672042 128672102 -37978194 + B3 SINE B2 68 129 -87 2 1566 3281 40 0 2 chrX 128672149 128672552 -37977744 + L1Md_F2 LINE L1 6169 6570 -12 2 1566 218 303 13 0 chrX 128672899 128672975 -37977321 + (TA)n Simple_repeat Simple_repeat 2 78 0 2 1566 222 225 0 0 chrX 128672930 128672970 -37977326 + (CATATA)n Simple_repeat Simple_repeat 5 44 0 2 1566 252 321 42 21 chrX 128674857 128675000 -37975296 - MIR SINE MIR 0 262 117 2 1566 265 321 0 12 chrX 128675387 128675469 -37974827 + B4A SINE B4 2 82 -210 2 1566 2734 79 0 3 chrX 128675534 128675904 -37974392 + L1_Mus1 LINE L1 6199 6567 0 2 1566 209 33 33 0 chrX 128675909 128675939 -37974357 + (GAA)n Simple_repeat Simple_repeat 1 31 0 2 1566 3767 172 22 53 chrX 128675987 128676719 -37973577 + Lx4A LINE L1 513 1223 -5863 2 1566 243 0 0 0 chrX 128676719 128676746 -37973550 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1566 3767 172 22 53 chrX 128676746 128676791 -37973505 + Lx4A LINE L1 1224 1266 -5820 2 1566 7888 145 22 30 chrX 128676795 128677505 -37972791 + Lx4A LINE L1 5007 5711 -1347 2 1566 189 0 0 0 chrX 128677505 128677526 -37972770 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2 1566 7888 162 33 20 chrX 128677526 128678802 -37971494 + Lx4A LINE L1 5712 7015 -43 2 1566 2992 108 25 19 chrX 128679087 128679559 -37970737 + MT2C_Mm LTR ERVL 1 475 0 2 1566 306 290 0 0 chrX 128680248 128680348 -37969948 - L1ME1 LINE L1 -10 6169 6070 2 1566 572 281 49 49 chrX 128680585 128680873 -37969423 - L1ME1 LINE L1 -571 5591 5304 2 1566 537 315 86 55 chrX 128680886 128681141 -37969155 + MLT1D LTR MaLR 13 275 -230 2 1566 535 291 11 39 chrX 128681466 128681645 -37968651 - Lx8 LINE L1 -112 7361 7188 2 1566 342 164 0 0 chrX 128681658 128681719 -37968577 - MTD LTR MaLR -8 411 351 2 1566 345 211 38 74 chrX 128681724 128681933 -37968363 + HAL1-2a_MD LINE L1 2356 2520 -504 2 1566 1182 276 79 0 chrX 128681938 128682253 -37968043 - MTD LTR MaLR -79 340 1 2 1566 355 335 42 13 chrX 128682438 128682620 -37967676 + Lx8 LINE L1 6774 6971 -502 2 1566 1280 264 66 23 chrX 128682670 128683019 -37967277 - ORR1D2 LTR MaLR -2 368 5 2 1566 337 243 136 0 chrX 128683158 128683261 -37967035 - MER58B DNA MER1_type -112 229 113 2 1566 27 29 0 0 chrX 128683264 128683298 -37966998 + AT_rich Low_complexity Low_complexity 1 34 0 2 1566 278 309 88 27 chrX 128683398 128683661 -37966635 - L1MEf LINE L1 -4479 1721 1443 2 1566 1017 111 14 0 chrX 128683835 128683979 -37966317 + B1_Mm SINE Alu 2 147 0 2 1566 280 60 43 43 chrX 128683980 128684050 -37966246 + (CAAA)n Simple_repeat Simple_repeat 3 72 0 2 1566 607 308 116 38 chrX 128684050 128684472 -37965824 - L1MEf LINE L1 -4895 1305 851 2 1566 3261 293 42 24 chrX 128684597 128685746 -37964550 - Lx8 LINE L1 0 7473 6304 2 1566 401 325 28 36 chrX 128686763 128687057 -37963239 + MTD LTR MaLR 81 399 -20 2 1566 1942 205 26 19 chrX 128687128 128687546 -37962750 + MTC LTR MaLR 1 421 0 2 1566 7454 83 18 29 chrX 128687575 128689414 -37960882 + L1_Mus1 LINE L1 4763 6567 0 2 1566 2991 50 0 10 chrX 128690688 128691072 -37959224 + L1Md_F2 LINE L1 6191 6570 -12 2 1566 396 0 0 0 chrX 128691402 128691446 -37958850 + (TTA)n Simple_repeat Simple_repeat 2 45 0 2 1566 761 345 96 39 chrX 128691446 128691905 -37958391 - MLT1D LTR MaLR -20 485 1 2 1566 247 311 0 63 chrX 128691940 128692019 -37958277 + ID SINE ID 5 78 -146 2 1566 293 299 0 0 chrX 128692142 128692239 -37958057 - L1MA5 LINE L1 -8 6292 6196 2 1566 25733 26 0 1 chrX 128692328 128695655 -37954641 + L1Md_T LINE L1 2835 6158 -424 2 1566 7977 40 1 1 chrX 128695646 128696876 -37953420 - L1Md_F2 LINE L1 -22 6560 5332 2 1566 690 281 0 0 chrX 128696903 128697070 -37953226 - Lx9 LINE L1 -711 6933 6767 2 1566 288 238 54 131 chrX 128697123 128697345 -37952951 - L1MCc LINE L1 -4959 1464 1260 2 1566 305 288 148 13 chrX 128697486 128697641 -37952655 - L1MCc LINE L1 -5210 1213 1038 2 1566 372 43 0 0 chrX 128699390 128699436 -37950860 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1566 1803 36 14 0 chrX 128699476 128699699 -37950597 - L1Md_F2 LINE L1 0 6582 6357 2 1566 21 0 0 0 chrX 128700029 128700050 -37950246 + AT_rich Low_complexity Low_complexity 1 21 0 2 1566 254 344 30 60 chrX 128700231 128700398 -37949898 - MIR SINE MIR -5 257 96 2 1566 2341 101 0 58 chrX 128700541 128700888 -37949408 + ORR1A2 LTR MaLR 1 327 0 2 1566 515 53 0 13 chrX 128701675 128701751 -37948545 + (TTTA)n Simple_repeat Simple_repeat 2 76 0 2 1566 858 60 0 0 chrX 128701753 128701869 -37948427 - B1_Mus1 SINE Alu -6 142 27 2 1566 22 35 0 0 chrX 128702938 128702967 -37947329 + AT_rich Low_complexity Low_complexity 1 29 0 2 1566 180 125 0 0 chrX 128703079 128703111 -37947185 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 2 1566 21 0 0 0 chrX 128705486 128705507 -37944789 + AT_rich Low_complexity Low_complexity 1 21 0 2 1566 297 0 0 0 chrX 128706434 128706467 -37943829 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 2 1566 2918 230 32 47 chrX 128707659 128708380 -37941916 - RMER13A LTR ERVK -54 904 75 2 1566 296 323 37 15 chrX 128708393 128708528 -37941768 + Lx6 LINE L1 7323 7460 0 2 1566 498 46 0 0 chrX 128708913 128708978 -37941318 + (TC)n Simple_repeat Simple_repeat 1 65 0 2 1566 216 0 0 0 chrX 128708978 128709001 -37941295 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 1566 210 139 47 0 chrX 128709096 128709139 -37941157 + (TTAAA)n Simple_repeat Simple_repeat 1 45 0 2 1566 270 106 0 0 chrX 128709347 128709394 -37940902 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 1566 270 438 21 75 chrX 128709415 128709582 -37940714 - MLT-int LTR MaLR -611 1124 969 2 1566 315 0 0 0 chrX 128709582 128709617 -37940679 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 2 1566 270 438 21 75 chrX 128709617 128709728 -37940568 - MLT-int LTR MaLR -767 968 861 2 1566 3144 116 127 16 chrX 128709877 128710120 -37940176 + Lx3C LINE L1 6075 6336 -640 2 1566 4906 46 21 0 chrX 128710120 128710724 -37939572 + L1Md_F2 LINE L1 5965 6581 -1 2 1566 3144 116 127 16 chrX 128710724 128711030 -37939266 + Lx3C LINE L1 6337 6684 -292 2 1566 264 156 188 0 chrX 128711028 128711092 -37939204 + Lx3C LINE L1 6892 6967 -9 2 1566 3871 116 38 95 chrX 128711111 128711826 -37938470 + Lx3A LINE L1 6300 6973 -8 2 1566 22 0 0 0 chrX 128711830 128711852 -37938444 + AT_rich Low_complexity Low_complexity 1 22 0 2 1566 244 156 54 135 chrX 128712125 128712199 -37938097 - RMER15 LTR ERVL -505 70 3 2 1566 409 344 41 15 chrX 128712357 128712552 -37937744 - MLT-int LTR MaLR -1388 347 148 2 1567 21 0 0 0 chrX 128712953 128712974 -37937322 + AT_rich Low_complexity Low_complexity 1 21 0 2 1567 427 387 46 28 chrX 128712974 128713192 -37937104 - MLT1A1 LTR MaLR -65 343 122 2 1567 260 274 94 10 chrX 128713303 128713399 -37936897 - MLT1A1 LTR MaLR -304 104 1 2 1567 1339 296 174 36 chrX 128713472 128714085 -37936211 + Lx8 LINE L1 6777 7473 0 2 1567 305 306 39 66 chrX 128714349 128714531 -37935765 + L1MD3 LINE L1 5227 5403 -743 2 1567 335 271 129 53 chrX 128714556 128714985 -37935311 + L1MD3 LINE L1 5494 5951 -408 2 1567 15432 74 3 17 chrX 128717098 128719235 -37931061 - L1_Mm LINE L1 -331 5552 3446 2 1567 670 328 25 12 chrX 128719235 128719476 -37930820 - MTD LTR MaLR -163 256 13 2 1567 351 0 0 0 chrX 128719738 128719777 -37930519 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1567 4253 149 75 26 chrX 128719777 128720630 -37929666 + RMER17A2 LTR ERVK 1 895 -11 2 1567 360 64 0 0 chrX 128720637 128720684 -37929612 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 1567 868 184 0 15 chrX 128721085 128721289 -37929007 + Lx7 LINE L1 7370 7570 -126 3 1567 2427 227 16 17 chrX 128721302 128721876 -37928420 - Lx4B LINE L1 -7 7051 6130 3 1567 2830 193 74 9 chrX 128722923 128723476 -37926820 - Lx5 LINE L1 -143 6907 6319 3 1567 494 231 0 8 chrX 128723472 128723590 -37926706 + Lx7 LINE L1 7575 7691 -5 3 1567 22 0 0 0 chrX 128723727 128723749 -37926547 + AT_rich Low_complexity Low_complexity 1 22 0 3 1567 1262 134 5 0 chrX 128724497 128724706 -37925590 + L1_Mur2 LINE L1 4081 4290 -1587 3 1567 366 23 0 0 chrX 128724713 128724756 -37925540 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1567 5413 211 151 24 chrX 128724761 128725976 -37924320 + Lx5 LINE L1 5587 6967 -83 3 1567 1322 210 33 0 chrX 128725976 128726252 -37924044 - Lx2B LINE L1 0 7000 6716 3 1567 5413 211 151 24 chrX 128726252 128726335 -37923961 + Lx5 LINE L1 6968 7050 0 3 1567 28 61 0 0 chrX 128726342 128726391 -37923905 + AT_rich Low_complexity Low_complexity 1 49 0 3 1567 217 0 61 0 chrX 128726787 128726820 -37923476 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 3 1567 184 54 0 75 chrX 128727596 128727636 -37922660 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 3 1567 297 0 0 0 chrX 128728045 128728078 -37922218 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1567 3757 186 53 88 chrX 128728308 128729214 -37921082 + RMER19B LTR ERVK 1 874 -28 3 1567 204 192 54 14 chrX 128729214 128729288 -37921008 + (TA)n Simple_repeat Simple_repeat 2 78 0 3 1567 295 261 84 32 chrX 128729547 128729642 -37920654 + Lx8 LINE L1 6359 6458 -1015 3 1567 371 38 19 0 chrX 128730531 128730584 -37919712 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1567 479 306 49 37 chrX 128730615 128731040 -37919256 + Lx8 LINE L1 5706 6172 -1301 3 1567 375 23 0 0 chrX 128731159 128731203 -37919093 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1567 1052 322 18 12 chrX 128731219 128731618 -37918678 + Lx8 LINE L1 6356 6756 -717 3 1567 303 343 39 34 chrX 128732333 128732511 -37917785 - L1ME1 LINE L1 -280 5899 5721 3 1567 22 35 0 0 chrX 128733043 128733072 -37917224 + AT_rich Low_complexity Low_complexity 1 29 0 3 1567 21 0 0 0 chrX 128733256 128733277 -37917019 + AT_rich Low_complexity Low_complexity 1 21 0 3 1567 189 0 0 0 chrX 128733448 128733469 -37916827 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 1567 943 148 22 16 chrX 128733519 128733704 -37916592 + Lx3B LINE L1 6785 6970 -3 3 1567 39 0 0 0 chrX 128733704 128733743 -37916553 + AT_rich Low_complexity Low_complexity 1 39 0 3 1567 186 43 0 0 chrX 128734132 128734155 -37916141 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1567 1595 223 97 6 chrX 128734253 128734614 -37915682 - Lx5 LINE L1 -7 7043 6650 3 1567 4250 55 2 2 chrX 128735371 128735903 -37914393 + L1Md_F2 LINE L1 6046 6577 -5 3 1567 1114 163 16 5 chrX 128736389 128736580 -37913716 - B2_Mm2 SINE B2 -1 194 2 3 1567 3410 158 44 118 chrX 128736638 128737484 -37912812 - RLTR25A LTR ERVK -1 1102 320 3 1567 563 294 74 43 chrX 128737599 128737830 -37912466 - B4A SINE B4 -50 242 5 3 1567 939 57 0 0 chrX 128737855 128737977 -37912319 + (GGAA)n Simple_repeat Simple_repeat 3 124 0 3 1567 189 74 0 0 chrX 128738307 128738334 -37911962 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 3 1567 472 240 96 0 chrX 128738474 128738578 -37911718 - B1_Mur1 SINE Alu -26 123 10 3 1567 210 37 0 0 chrX 128738637 128738664 -37911632 + (TTAAA)n Simple_repeat Simple_repeat 1 27 0 3 1567 25 0 0 0 chrX 128739267 128739292 -37911004 + AT_rich Low_complexity Low_complexity 1 25 0 3 1567 2792 38 6 3 chrX 128739292 128739639 -37910657 - L1Md_F3 LINE L1 -17 6567 6220 3 1567 2705 64 30 67 chrX 128739640 128740043 -37910253 - RLTR10 LTR ERVK -2 388 1 3 1567 8121 42 18 2 chrX 128740043 128740665 -37909631 - RLTR10-int LTR ERVK -1 1986 1366 3 1567 203 0 37 0 chrX 128740665 128740692 -37909604 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 1567 8121 42 18 2 chrX 128740692 128741050 -37909246 - RLTR10-int LTR ERVK -622 1365 991 3 1567 4087 134 110 75 chrX 128741307 128742240 -37908056 - RLTR10-int LTR ERVK -983 1004 39 3 1567 2833 73 18 0 chrX 128742251 128742632 -37907664 - RLTR10 LTR ERVK -2 388 1 3 1567 28451 70 2 0 chrX 128742632 128746767 -37903529 - L1Md_F3 LINE L1 -358 6226 2083 3 1567 3995 164 15 4 chrX 128746762 128747493 -37902803 - L1Md_F3 LINE L1 -5563 1161 423 3 1567 1298 59 6 6 chrX 128747812 128747982 -37902314 - L1_Mus2 LINE L1 -290 6276 6107 3 1567 2006 99 3 10 chrX 128747984 128748279 -37902017 + L1_Mus2 LINE L1 6274 6566 0 3 1567 228 111 0 0 chrX 128748811 128748847 -37901449 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1567 294 227 0 0 chrX 128748866 128748932 -37901364 - Lx7 LINE L1 -354 7342 7277 3 1567 1555 226 84 136 chrX 128748933 128749578 -37900718 + RMER19C LTR ERVK 1 611 0 3 1567 3839 207 25 1 chrX 128749609 128750355 -37899941 - Lx6 LINE L1 -443 7017 6254 3 1567 708 309 23 33 chrX 128750918 128751118 -37899178 + B3 SINE B2 5 205 -11 3 1567 297 0 0 0 chrX 128751118 128751151 -37899145 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1567 708 309 23 33 chrX 128751151 128751164 -37899132 + B3 SINE B2 206 216 0 3 1567 2474 99 124 9 chrX 128751587 128752013 -37898283 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1567 578 133 16 124 chrX 128752014 128752143 -37898153 + IAPEz-int LTR ERVK 9 123 -6358 3 1567 227 267 0 0 chrX 128752143 128752188 -37898108 + RLTR27 LTR ERVK 231 275 -34 3 1567 237 327 0 0 chrX 128752214 128752269 -37898027 + RLTR27 LTR ERVK 221 275 -34 3 1567 3411 59 22 16 chrX 128752269 128752835 -37897461 + IAPEz-int LTR ERVK 168 662 -5819 3 1567 2229 65 0 0 chrX 128752835 128753113 -37897183 + IAPEz-int LTR ERVK 1359 1636 -4845 3 1567 6231 31 4 12 chrX 128753112 128753862 -37896434 + IAPEz-int LTR ERVK 5736 6479 -2 3 1567 2474 98 129 14 chrX 128753864 128754290 -37896006 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1567 287 0 53 0 chrX 128754630 128754668 -37895628 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 3 1567 3397 157 15 20 chrX 128754725 128755359 -37894937 + Lx4A LINE L1 6306 6975 -83 3 1567 402 367 16 32 chrX 128755961 128756200 -37894096 + B4A SINE B4 3 232 -60 3 1567 626 312 83 28 chrX 128756512 128757019 -37893277 - L1MC2 LINE L1 -461 5883 5349 3 1567 525 353 47 17 chrX 128757042 128757372 -37892924 - MTD LTR MaLR -36 383 18 3 1567 244 200 0 0 chrX 128757424 128757469 -37892827 - L1MC2 LINE L1 -848 5298 5254 3 1567 28 29 0 0 chrX 128757581 128757616 -37892680 + AT_rich Low_complexity Low_complexity 1 35 0 3 1567 1250 274 9 3 chrX 128757617 128757939 -37892357 - Lx6 LINE L1 -19 7441 7118 3 1567 266 327 94 19 chrX 128758130 128758236 -37892060 + B1F SINE Alu 24 137 -12 3 1567 879 306 45 37 chrX 128758275 128758406 -37891890 - L1MC2 LINE L1 -1126 5020 4901 3 1567 1378 85 11 0 chrX 128758406 128758594 -37891702 - B2_Mm1t SINE B2 -3 190 1 3 1567 879 306 45 37 chrX 128758594 128758948 -37891348 - L1MC2 LINE L1 -1246 4900 4531 3 1567 256 314 9 0 chrX 128758945 128759050 -37891246 - L1MC2 LINE L1 -3605 2541 2436 3 1567 4024 224 21 25 chrX 128759060 128759896 -37890400 - Lx5 LINE L1 -52 6998 6166 3 1567 257 234 30 50 chrX 128760021 128760120 -37890176 - Lx4B LINE L1 0 7058 6962 3 1567 809 200 29 0 chrX 128760166 128760341 -37889955 - Lx5 LINE L1 -938 6112 5933 3 1567 734 240 133 7 chrX 128760498 128760792 -37889504 - L1MCa LINE L1 -2536 3785 3455 3 1567 3775 224 101 27 chrX 128761061 128761803 -37888493 + RMER12 LTR ERVK 5 763 -559 3 1567 360 0 0 0 chrX 128761803 128761843 -37888453 + (TCCA)n Simple_repeat Simple_repeat 4 43 0 3 1567 3775 212 141 52 chrX 128761843 128762368 -37887928 + RMER12 LTR ERVK 764 1122 -200 3 1567 183 42 0 0 chrX 128762461 128762485 -37887811 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 3 1567 5867 64 4 4 chrX 128762624 128763388 -37886908 - L1Md_F2 LINE L1 0 6582 5819 3 1567 652 361 16 37 chrX 128763626 128764060 -37886236 - L1MCa LINE L1 -5808 700 276 3 1567 959 247 177 16 chrX 128764081 128764227 -37886069 - ORR1D1 LTR MaLR -19 355 176 3 1567 500 0 17 0 chrX 128764227 128764287 -37886009 + (GA)n Simple_repeat Simple_repeat 2 62 0 3 1567 959 247 177 16 chrX 128764287 128764445 -37885851 - ORR1D1 LTR MaLR -199 175 3 3 1567 270 376 33 7 chrX 128764457 128764607 -37885689 - L1MCa LINE L1 -6240 268 115 3 1567 245 406 30 36 chrX 128764724 128764890 -37885406 - MIRb SINE MIR -75 193 29 3 1567 566 310 77 42 chrX 128765341 128765627 -37884669 + Lx8 LINE L1 6944 7239 -234 3 1567 4588 265 47 24 chrX 128765845 128767250 -37883046 + Lx6 LINE L1 5942 7633 -63 3 1567 1497 76 0 0 chrX 128767337 128767535 -37882761 + L1_Mus4 LINE L1 5929 6126 -510 3 1567 3981 166 10 6 chrX 128767793 128768479 -37881817 - Lx2 LINE L1 -2 6995 6307 3 1567 247 305 63 0 chrX 128770557 128770652 -37879644 - MIRb SINE MIR -44 224 124 3 1567 423 239 164 53 chrX 128770652 128770818 -37879478 - MLT1A LTR MaLR -27 478 260 3 1567 394 298 0 0 chrX 128771479 128771563 -37878733 + B3A SINE B2 3 86 -112 3 1567 749 156 156 0 chrX 128771556 128771691 -37878605 - RMER6D LTR ERVK -564 156 1 3 1567 247 291 52 33 chrX 128771691 128771777 -37878519 - B1F2 SINE Alu -61 88 8 3 1567 961 237 62 1 chrX 128775066 128775290 -37875006 - Lx4B LINE L1 -443 6615 6392 3 1567 2203 75 16 13 chrX 128775290 128775600 -37874696 - L1Md_F2 LINE L1 -2 6580 6270 3 1567 605 309 68 25 chrX 128775600 128775614 -37874682 - Lx4B LINE L1 -624 6030 6018 3 1567 240 0 0 0 chrX 128775657 128775683 -37874613 + L1Md_F3 LINE L1 6227 6252 -332 3 1567 541 216 8 8 chrX 128775681 128775807 -37874489 - Lx2B LINE L1 -600 6400 6275 3 1567 943 246 79 35 chrX 128775804 128776094 -37874202 + Lx2B LINE L1 6690 6992 -8 3 1567 32 26 0 0 chrX 128776103 128776142 -37874154 + AT_rich Low_complexity Low_complexity 1 39 0 3 1567 485 185 114 30 chrX 128776158 128776291 -37874005 - Lx7 LINE L1 -73 7623 7476 3 1567 459 0 0 0 chrX 128776291 128776342 -37873954 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1567 485 185 114 30 chrX 128776342 128776375 -37873921 - Lx7 LINE L1 -221 7475 7443 3 1567 2495 130 2 23 chrX 128776495 128776890 -37873406 + Lx LINE L1 6206 6592 -62 3 1567 975 246 43 9 chrX 128776906 128777136 -37873160 - Lx7 LINE L1 -518 7178 6941 3 1567 309 228 0 0 chrX 128777848 128777927 -37872369 + (TG)n Simple_repeat Simple_repeat 1 79 0 3 1567 386 205 48 24 chrX 128777936 128778101 -37872195 + Lx9 LINE L1 7476 7644 0 3 1567 5160 113 3 5 chrX 128778145 128778901 -37871395 + L1Md_F2 LINE L1 5817 6570 -12 3 1567 22 0 0 0 chrX 128779494 128779516 -37870780 + AT_rich Low_complexity Low_complexity 1 22 0 3 1567 501 197 184 0 chrX 128779516 128779663 -37870633 + Lx5 LINE L1 6874 7047 -3 3 1567 1546 239 50 22 chrX 128779671 128780073 -37870223 - Lx9 LINE L1 -277 7367 6955 3 1567 310 197 27 31 chrX 128780068 128780170 -37870126 - L1MA6 LINE L1 -377 5923 5784 3 1567 242 275 75 22 chrX 128781285 128781419 -37868877 + L1M3 LINE L1 4667 4807 -1333 3 1567 345 24 0 0 chrX 128781435 128781477 -37868819 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1567 263 342 35 0 chrX 128783636 128783750 -37866546 - MER3 DNA MER1_type 0 209 92 3 1567 743 271 16 6 chrX 128785138 128785320 -37864976 + B3 SINE B2 33 216 0 3 1567 339 253 0 0 chrX 128786868 128786943 -37863353 - MADE2 DNA Mariner 0 80 6 3 1567 532 298 95 11 chrX 128787296 128787486 -37862810 - MER58C DNA MER1_type -6 209 4 4 1567 23 0 0 0 chrX 128787721 128787744 -37862552 + AT_rich Low_complexity Low_complexity 1 23 0 4 1567 236 136 34 0 chrX 128787838 128787897 -37862399 + (TCTCTG)n Simple_repeat Simple_repeat 3 63 0 4 1567 806 237 30 10 chrX 128787917 128788117 -37862179 + ORR1C2 LTR MaLR 176 379 -5 4 1567 468 232 182 0 chrX 128788124 128788344 -37861952 + Lx9 LINE L1 7368 7627 -17 4 1567 540 297 51 0 chrX 128788465 128788583 -37861713 + RSINE1 SINE B4 11 134 -31 4 1567 2996 96 2 41 chrX 128788683 128789235 -37861061 - Lx3_Mus LINE L1 -1087 5922 5426 4 1567 338 213 0 0 chrX 128789222 128789283 -37861013 + Lx6 LINE L1 7133 7193 -267 4 1567 279 164 68 0 chrX 128789344 128789417 -37860879 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 4 1567 293 224 297 29 chrX 128789515 128789653 -37860643 - Lx8 LINE L1 -2 7471 7297 4 1567 500 154 10 0 chrX 128789712 128789816 -37860480 + (TTA)n Simple_repeat Simple_repeat 1 105 0 4 1567 13528 157 38 30 chrX 128789818 128792063 -37858233 - Lx3C LINE L1 -11 6965 4687 4 1567 1862 134 69 16 chrX 128792063 128792382 -37857914 + Lx LINE L1 6319 6654 0 4 1567 13528 182 41 60 chrX 128792382 128794763 -37855533 - Lx3C LINE L1 -1200 4686 2390 4 1567 1180 187 9 9 chrX 128794745 128794977 -37855319 - Lx3C LINE L1 -3916 1970 1739 4 1567 354 322 146 4 chrX 128795024 128795328 -37854968 + Lx7 LINE L1 5532 5909 -1787 4 1567 412 353 23 0 chrX 128796415 128796548 -37853748 + ID_B1 SINE B4 81 216 -8 4 1567 781 108 0 23 chrX 128796632 128796765 -37853531 + (GAAA)n Simple_repeat Simple_repeat 3 132 0 4 1567 22 0 0 0 chrX 128797342 128797364 -37852932 + AT_rich Low_complexity Low_complexity 1 22 0 4 1567 305 245 178 47 chrX 128797886 128797993 -37852303 + Lx7 LINE L1 7159 7279 -417 4 1567 888 289 27 30 chrX 128797996 128798296 -37852000 + Lx7 LINE L1 7118 7416 -280 4 1567 23 33 0 0 chrX 128798466 128798496 -37851800 + AT_rich Low_complexity Low_complexity 1 30 0 4 1567 572 306 28 0 chrX 128799123 128799303 -37850993 + B3A SINE B2 4 188 -10 4 1567 489 127 0 0 chrX 128799746 128799825 -37850471 + (TA)n Simple_repeat Simple_repeat 1 79 0 4 1567 680 268 14 46 chrX 128800638 128800857 -37849439 - B3 SINE B2 -4 212 1 4 1567 22 0 0 0 chrX 128801153 128801175 -37849121 + AT_rich Low_complexity Low_complexity 1 22 0 4 1567 245 337 60 0 chrX 128802315 128802398 -37847898 - L4 LINE RTE -1199 830 743 4 1567 2538 88 6 6 chrX 128802639 128802992 -37847304 + L1_Mus1 LINE L1 6211 6563 -4 4 1567 315 71 0 0 chrX 128804115 128804157 -37846139 + (TAA)n Simple_repeat Simple_repeat 2 43 0 4 1567 1164 132 0 16 chrX 128804621 128804806 -37845490 - B2_Mm2 SINE B2 -13 182 1 4 1567 21 0 0 0 chrX 128804811 128804832 -37845464 + AT_rich Low_complexity Low_complexity 1 21 0 4 1567 28 86 0 0 chrX 128806022 128806092 -37844204 + AT_rich Low_complexity Low_complexity 1 70 0 4 1567 4119 189 103 33 chrX 128806136 128807081 -37843215 + Lx3A LINE L1 2787 3817 -2069 4 1567 465 19 0 0 chrX 128807081 128807135 -37843161 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 1567 4119 189 103 33 chrX 128807135 128807476 -37842820 + Lx3A LINE L1 3818 4161 -1725 4 1567 12751 21 0 0 chrX 128807473 128808969 -37841327 - L1Md_T LINE L1 -429 5454 3959 4 1567 1048 17 0 0 chrX 128808968 128809086 -37841210 + L1Md_T LINE L1 5469 5586 -297 4 1567 9005 4 0 0 chrX 128809086 128810082 -37840214 + L1Md_T LINE L1 5587 6582 0 4 1567 816 184 7 0 chrX 128810109 128810245 -37840051 + B1_Mur2 SINE Alu 1 137 -12 4 1567 207 0 0 0 chrX 128810245 128810268 -37840028 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 4 1567 11393 114 38 7 chrX 128810278 128813034 -37837262 + Lx3A LINE L1 4128 6973 -8 4 1567 216 0 0 0 chrX 128813053 128813077 -37837219 + (TAA)n Simple_repeat Simple_repeat 2 25 0 4 1567 459 78 0 0 chrX 128813242 128813306 -37836990 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 1567 252 0 0 0 chrX 128813537 128813565 -37836731 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1567 252 234 15 15 chrX 128813565 128813630 -37836666 + RMER15 LTR ERVL 372 436 -139 4 1567 492 271 53 24 chrX 128813641 128813819 -37836477 - B3 SINE B2 -2 214 32 4 1567 505 255 69 38 chrX 128813819 128813978 -37836318 + RMER15 LTR ERVL 412 575 0 4 1567 1808 218 31 22 chrX 128814013 128814430 -37835866 + MTC LTR MaLR 1 421 0 4 1567 4176 221 33 34 chrX 128814430 128815395 -37834901 + MTC-int LTR MaLR 295 1258 0 4 1567 1983 232 17 10 chrX 128815395 128815813 -37834483 + MTC LTR MaLR 1 421 0 4 1567 27 29 0 0 chrX 128815917 128815951 -37834345 + AT_rich Low_complexity Low_complexity 1 34 0 4 1567 842 290 5 24 chrX 128815960 128816165 -37834131 - B3 SINE B2 -10 206 6 4 1567 231 312 128 11 chrX 128816437 128816531 -37833765 - LTR40b LTR ERVL -56 406 302 4 1567 366 304 149 20 chrX 128816688 128816836 -37833460 - LTR40b LTR ERVL -289 173 7 4 1567 3192 116 41 19 chrX 128817024 128817536 -37832760 - Lx3A LINE L1 -814 6167 5645 4 1567 3226 153 28 2 chrX 128817536 128818079 -37832217 + Lx3A LINE L1 6420 6976 -5 4 1567 213 39 0 0 chrX 128818085 128818111 -37832185 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 1567 325 164 137 0 chrX 128818582 128818654 -37831642 - ORR1D1 LTR MaLR -5 369 288 4 1567 1708 210 69 32 chrX 128818654 128819058 -37831238 - MTC LTR MaLR 0 421 3 4 1567 768 286 30 38 chrX 128819066 128819331 -37830965 - ORR1D1 LTR MaLR -111 263 1 4 1567 285 363 8 46 chrX 128819750 128819880 -37830416 - MTE-int LTR MaLR -1126 454 330 4 1567 382 119 0 0 chrX 128819895 128819954 -37830342 + RLTR25A LTR ERVK 12 70 -1033 4 1567 3095 163 34 37 chrX 128819954 128820546 -37829750 + RLTR25A LTR ERVK 514 1103 0 4 1567 380 245 26 26 chrX 128821207 128821320 -37828976 + RLTR23 LTR ERV1 316 428 -2 4 1567 272 295 87 65 chrX 128821337 128821475 -37828821 - MTE-int LTR MaLR -1439 141 1 4 1567 635 304 108 8 chrX 128822231 128822480 -37827816 + B4A SINE B4 3 276 -16 4 1567 509 282 55 37 chrX 128822567 128822784 -37827512 - RLTR45 LTR ERVK 0 482 262 4 1567 271 0 0 49 chrX 128824351 128824392 -37825904 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1567 621 0 0 0 chrX 128825082 128825151 -37825145 + (TC)n Simple_repeat Simple_repeat 2 70 0 4 1567 25 0 0 0 chrX 128825461 128825486 -37824810 + AT_rich Low_complexity Low_complexity 1 25 0 4 1567 272 314 77 6 chrX 128826096 128826266 -37824030 - HERVL40-int LTR ERVL -5345 185 4 4 1567 817 282 81 89 chrX 128826296 128826666 -37823630 - LTR40b LTR ERVL -26 436 70 4 1567 1770 168 6 68 chrX 128826963 128827314 -37822982 + ORR1A4 LTR MaLR 1 329 0 4 1567 483 323 41 91 chrX 128827652 128827894 -37822402 - B4A SINE B4 -62 230 1 4 1567 2671 107 2 2 chrX 128827934 128828338 -37821958 - L1_Mus4 LINE L1 -2 6634 6231 4 1567 23 0 0 0 chrX 128828482 128828505 -37821791 + AT_rich Low_complexity Low_complexity 1 23 0 4 1567 288 0 0 0 chrX 128829057 128829089 -37821207 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1567 369 0 0 0 chrX 128829089 128829129 -37821167 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 1567 21 36 0 0 chrX 128829310 128829338 -37820958 + AT_rich Low_complexity Low_complexity 1 28 0 4 1567 21 71 0 0 chrX 128829387 128829429 -37820867 + AT_rich Low_complexity Low_complexity 1 42 0 4 1567 279 116 0 0 chrX 128830202 128830245 -37820051 - L1ME2z LINE L1 -8 6436 6394 4 1567 519 306 58 47 chrX 128830559 128831136 -37819160 - L1M3 LINE L1 -561 5739 5149 4 1567 275 299 0 0 chrX 128831128 128831225 -37819071 - L1M3 LINE L1 -1468 4672 4576 4 1567 599 256 50 16 chrX 128831307 128831574 -37818722 - L1M3e LINE L1 -4939 2091 1573 4 1567 2352 172 93 88 chrX 128831881 128832567 -37817729 - RMER6C LTR ERVK 0 690 1 4 1567 1372 303 19 24 chrX 128832740 128833021 -37817275 + MTE2b LTR MaLR 1 277 -102 4 1567 3490 166 115 1 chrX 128833021 128833683 -37816613 + RMER19A LTR ERVK 1 737 0 4 1567 1372 303 19 24 chrX 128833683 128833773 -37816523 + MTE2b LTR MaLR 278 370 -9 4 1567 261 282 11 34 chrX 128833912 128834000 -37816296 - L1M3e LINE L1 -6938 92 7 4 1567 451 315 61 66 chrX 128834085 128834282 -37816014 + B3A SINE B2 1 196 -2 4 1567 297 151 0 0 chrX 128834674 128834727 -37815569 + (CTG)n Simple_repeat Simple_repeat 1 53 0 4 1567 795 308 116 20 chrX 128834792 128834805 -37815491 - Lx8 LINE L1 -224 7249 7237 4 1567 252 0 0 0 chrX 128834805 128834833 -37815463 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 4 1567 795 308 116 20 chrX 128834833 128835320 -37814976 - Lx8 LINE L1 -237 7236 6702 4 1567 6259 152 40 21 chrX 128835331 128836493 -37813803 + Lx4A LINE L1 5610 6793 -265 4 1567 348 336 76 0 chrX 128836501 128836632 -37813664 - Lx8 LINE L1 -886 6587 6447 4 1567 365 314 0 10 chrX 128836959 128837062 -37813234 + MTE2b LTR MaLR 7 108 -271 4 1567 996 106 0 40 chrX 128837070 128837218 -37813078 - B1_Mus1 SINE Alu -6 142 1 4 1567 28 61 0 0 chrX 128837433 128837482 -37812814 + AT_rich Low_complexity Low_complexity 1 49 0 4 1567 833 255 125 0 chrX 128837483 128837699 -37812597 - Lx7 LINE L1 -713 6983 6741 4 1567 875 104 0 0 chrX 128837772 128837897 -37812399 - Lx2 LINE L1 -610 6044 5920 4 1567 2478 53 2 152 chrX 128837897 128837962 -37812334 + IAPEY2_LTR LTR ERVK 1 62 -295 4 1567 4673 34 2 0 chrX 128837962 128838516 -37811780 + L1Md_T LINE L1 6026 6580 -2 4 1567 2478 53 2 152 chrX 128838516 128838870 -37811426 + IAPEY2_LTR LTR ERVK 63 357 0 4 1567 5454 167 3 99 chrX 128838871 128840075 -37810221 - Lx2 LINE L1 -1073 5924 4781 4 1567 3299 163 27 10 chrX 128840075 128840665 -37809631 + Lx LINE L1 6048 6647 -7 4 1567 258 195 26 13 chrX 128841385 128841463 -37808833 + (TA)n Simple_repeat Simple_repeat 1 79 0 4 1567 2013 240 67 31 chrX 128841717 128842490 -37807806 + Lx9 LINE L1 2734 3534 -2313 4 1567 692 223 83 0 chrX 128842491 128842684 -37807612 + Lx9 LINE L1 3810 4018 -1829 4 1567 2262 214 60 39 chrX 128842688 128843047 -37807249 + Lx9 LINE L1 4506 4860 -987 4 1567 242 0 61 0 chrX 128843047 128843080 -37807216 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1567 2262 214 60 39 chrX 128843080 128843392 -37806904 + Lx9 LINE L1 4861 5191 -656 4 1567 554 257 47 3 chrX 128843390 128843593 -37806703 + Lx4B LINE L1 6746 7054 -4 4 195 757 249 53 71 chrX 128843750 128844246 -37806050 + Lx9 LINE L1 5906 6502 -1142 4 1568 189 94 0 0 chrX 128844251 128844283 -37806013 + (A)n Simple_repeat Simple_repeat 1 32 0 4 1568 2684 214 158 6 chrX 128844312 128845032 -37805264 + Lx9 LINE L1 6632 7461 -183 4 1568 645 217 17 0 chrX 128845236 128845356 -37804940 + RSINE1 SINE B4 23 144 -21 4 1568 819 292 72 58 chrX 128846956 128847288 -37803008 + ORR1D2 LTR MaLR 18 370 0 4 1568 21 57 0 0 chrX 128847685 128847720 -37802576 + AT_rich Low_complexity Low_complexity 1 35 0 4 1568 419 175 78 0 chrX 128849520 128849623 -37800673 - Lx9 LINE L1 -16 7628 7518 4 1568 774 309 74 15 chrX 128850450 128850719 -37799577 + MamRep137 DNA TcMar? 98 382 -62 4 1568 238 319 95 0 chrX 128851177 128851293 -37799003 + L1M4 LINE L1 17 143 -6399 4 1568 719 317 61 36 chrX 128851425 128851919 -37798377 + L1M4 LINE L1 299 804 -5738 4 1568 1440 305 71 14 chrX 128851984 128852549 -37797747 + Lx8 LINE L1 6595 7191 -282 4 1568 396 0 0 0 chrX 128852722 128852766 -37797530 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1568 4492 181 35 51 chrX 128853091 128854138 -37796158 + L1_Mur2 LINE L1 4554 5584 -293 4 1568 320 111 19 0 chrX 128854202 128854256 -37796040 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1568 207 162 0 0 chrX 128854256 128854293 -37796003 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 1568 1176 351 64 51 chrX 128854697 128855778 -37794518 + ERVL-int LTR ERVL 224 1318 -4439 5 1568 1771 281 50 38 chrX 128855785 128856502 -37793794 - L1_Mur3 LINE L1 -3031 2849 2114 5 1568 788 296 0 5 chrX 128856502 128856719 -37793577 + B3 SINE B2 1 216 0 5 1568 1771 281 50 38 chrX 128856719 128856763 -37793533 - L1_Mur3 LINE L1 -3767 2113 2079 5 1568 263 322 28 75 chrX 128857009 128857178 -37793118 + L1_Mur3 LINE L1 3270 3443 -2443 5 1568 931 148 0 0 chrX 128857178 128857313 -37792983 + B1_Mus1 SINE Alu 2 136 -12 5 1568 346 15 0 83 chrX 128857313 128857385 -37792911 + (CAAA)n Simple_repeat Simple_repeat 3 68 0 5 1568 263 307 46 89 chrX 128857385 128857604 -37792692 + L1_Mur3 LINE L1 3444 3673 -2467 5 1568 1678 309 53 57 chrX 128857613 128858623 -37791673 + L1_Mur3 LINE L1 3801 4821 -1059 5 1568 614 275 88 0 chrX 128858623 128858816 -37791480 - B3 SINE B2 -2 214 5 5 1568 1678 309 53 57 chrX 128858816 128859151 -37791145 + L1_Mur3 LINE L1 4822 5141 -739 5 1568 29 47 0 0 chrX 128859263 128859306 -37790990 + AT_rich Low_complexity Low_complexity 1 43 0 5 1568 721 285 62 37 chrX 128859508 128859912 -37790384 + L1_Mur3 LINE L1 5291 5704 -587 5 1568 232 238 244 8 chrX 128859920 128859993 -37790303 + Lx9 LINE L1 5744 5837 -1807 5 1568 885 50 0 0 chrX 128859993 128860112 -37790184 + (GA)n Simple_repeat Simple_repeat 2 120 0 5 1568 232 238 244 8 chrX 128860112 128860161 -37790135 + Lx9 LINE L1 5838 5895 -1749 5 1568 2773 268 100 16 chrX 128860628 128861455 -37788841 + Lx8 LINE L1 6189 7085 -388 5 1568 705 326 45 11 chrX 128861529 128861796 -37788500 + ERVL-int LTR ERVL 4662 4937 -820 5 1568 1913 232 82 44 chrX 128862239 128862736 -37787560 - RMER2 LTR ERV1 0 567 52 5 1568 2207 169 15 2 chrX 128862738 128863142 -37787154 + Lx2 LINE L1 6511 6919 -78 5 1568 609 293 97 7 chrX 128863482 128863915 -37786381 + ERVL-int LTR ERVL 5234 5705 -9 5 1568 375 352 111 72 chrX 128863925 128864052 -37786244 + MLT2B2 LTR ERVL 3 145 -370 5 1568 405 0 0 0 chrX 128864052 128864097 -37786199 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1568 375 352 111 72 chrX 128864097 128864275 -37786021 + MLT2B2 LTR ERVL 146 320 -195 5 1568 255 141 15 30 chrX 128864359 128864425 -37785871 + (TTG)n Simple_repeat Simple_repeat 2 66 0 5 1568 338 247 0 25 chrX 128864432 128864511 -37785785 + MLT2B2 LTR ERVL 426 502 -60 5 1568 291 71 0 0 chrX 128864677 128864719 -37785577 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1568 2560 87 39 82 chrX 128864746 128864858 -37785438 - BGLII_Mus LTR ERVK 0 422 318 5 1568 6494 41 0 0 chrX 128864858 128865637 -37784659 + L1Md_T LINE L1 5804 6582 0 5 1568 2560 87 39 82 chrX 128865637 128865965 -37784331 - BGLII_Mus LTR ERVK -105 317 1 5 1568 672 206 16 5 chrX 128866017 128866204 -37784092 - Lx9 LINE L1 -1714 5930 5704 5 1568 6443 57 2 2 chrX 128866204 128867025 -37783271 - L1Md_F2 LINE L1 -1 6581 5761 5 1568 791 244 17 29 chrX 128867035 128867208 -37783088 - B3 SINE B2 -45 171 1 5 1568 992 206 87 14 chrX 128869133 128869257 -37781039 - Lx9 LINE L1 -10 7634 7499 5 1568 294 29 0 0 chrX 128869257 128869292 -37781004 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1568 477 0 0 0 chrX 128869292 128869344 -37780952 + (GA)n Simple_repeat Simple_repeat 1 53 0 5 1568 992 206 87 14 chrX 128869344 128869494 -37780802 - Lx9 LINE L1 -146 7498 7340 5 1568 2156 195 14 9 chrX 128869491 128869916 -37780380 - Lx9 LINE L1 -548 7096 6670 5 1568 21 36 0 0 chrX 128870122 128870150 -37780146 + AT_rich Low_complexity Low_complexity 1 28 0 5 1568 224 273 0 0 chrX 128871697 128871763 -37778533 + (CAACT)n Simple_repeat Simple_repeat 2 67 0 5 1568 1175 199 194 42 chrX 128871769 128872079 -37778217 - RMER6C LTR ERVK -332 358 2 5 1568 2755 192 92 1 chrX 128872083 128872766 -37777530 + L1_Mur2 LINE L1 3948 4692 -1185 5 1568 3161 128 94 0 chrX 128872767 128873290 -37777006 + Lx LINE L1 6080 6651 -3 5 1568 3109 266 48 9 chrX 128873338 128874083 -37776213 + Lx5 LINE L1 6257 7030 -20 5 1568 4888 188 55 17 chrX 128874889 128875832 -37774464 - Lx4B LINE L1 -11 7047 6069 5 1568 531 45 0 0 chrX 128875852 128875918 -37774378 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 1568 225 318 0 0 chrX 128876646 128876709 -37773587 - MTE2a LTR MaLR -26 353 291 5 1568 343 290 92 29 chrX 128876863 128877037 -37773259 - Ricksha_c DNA MuDR -1593 455 271 5 1568 655 324 71 4 chrX 128877090 128877329 -37772967 - MTE-int LTR MaLR -124 1456 1202 5 1568 428 258 10 0 chrX 128877929 128878026 -37772270 - RMER2 LTR ERV1 -265 302 205 5 1568 442 335 19 0 chrX 128878027 128878188 -37772108 - RLTR4_MM-int LTR ERV1 -2561 4891 4728 5 1568 489 17 0 0 chrX 128878366 128878424 -37771872 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1568 6374 41 3 3 chrX 128878522 128879305 -37770991 - L1Md_F2 LINE L1 0 6582 5800 5 1568 544 339 56 29 chrX 128879364 128879738 -37770558 - RLTR4_MM-int LTR ERV1 -3163 4438 4055 5 1568 2408 190 96 42 chrX 128880731 128881252 -37769044 - RMER2 LTR ERV1 -18 549 1 5 1568 275 391 62 0 chrX 128881471 128881599 -37768697 + MLT1H LTR MaLR 341 476 -73 5 1568 398 288 92 38 chrX 128881854 128882038 -37768258 - RMER2 LTR ERV1 -4 563 370 5 1568 6583 115 29 8 chrX 128882764 128883753 -37766543 - Lx LINE L1 0 6654 5645 5 1568 221 0 0 33 chrX 128884727 128884757 -37765539 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1568 360 23 0 0 chrX 128885503 128885547 -37764749 - Lx2 LINE L1 -773 6224 6181 5 1568 4906 136 16 3 chrX 128885547 128886309 -37763987 + Lx2 LINE L1 6226 6997 0 5 1568 382 306 127 0 chrX 128886426 128886583 -37763713 - MIRc SINE MIR -18 250 74 5 1568 498 398 8 24 chrX 128886960 128887207 -37763089 - B4A SINE B4 -2 290 48 5 1568 2376 41 87 25 chrX 128887212 128887534 -37762762 + ORR1A1 LTR MaLR 5 346 0 5 1568 12593 67 36 1 chrX 128887534 128889266 -37761030 + ORR1A1-int LTR MaLR 1 1792 0 5 1568 2546 55 58 0 chrX 128889266 128889593 -37760703 + ORR1A1 LTR MaLR 1 346 0 5 1568 994 306 55 12 chrX 128889720 128890209 -37760087 - L1MA5 LINE L1 -366 5934 5425 5 1568 36 23 0 0 chrX 128890297 128890340 -37759956 + AT_rich Low_complexity Low_complexity 1 43 0 5 1568 1416 283 29 34 chrX 128890530 128890976 -37759320 - Lx8 LINE L1 -241 7232 6789 5 1568 935 296 22 24 chrX 128890984 128891445 -37758851 + Lx8 LINE L1 5519 5970 -1674 5 1568 914 323 122 43 chrX 128891742 128892347 -37757949 + Lx8 LINE L1 6109 6761 -712 5 1568 4676 137 25 0 chrX 128893000 128893240 -37757056 + L1_Mus3 LINE L1 5115 5354 -529 5 1568 252 0 0 0 chrX 128893240 128893268 -37757028 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 5 1568 7112 106 25 3 chrX 128893268 128894519 -37755777 + L1_Mus3 LINE L1 5355 6638 0 5 1568 536 311 15 0 chrX 128894675 128894810 -37755486 + B3A SINE B2 2 138 -60 5 1568 60 37 0 0 chrX 128894892 128894973 -37755323 + AT_rich Low_complexity Low_complexity 1 81 0 5 1568 22 35 0 0 chrX 128895262 128895291 -37755005 + AT_rich Low_complexity Low_complexity 1 29 0 5 1568 345 82 0 0 chrX 128897273 128897322 -37752974 + (GA)n Simple_repeat Simple_repeat 1 49 0 5 1568 5366 49 0 0 chrX 128898889 128899547 -37750749 - L1Md_F2 LINE L1 -5 6577 5920 5 1568 524 257 6 57 chrX 128899869 128900026 -37750270 - B3 SINE B2 -4 212 64 5 1568 315 49 0 0 chrX 128900176 128900217 -37750079 + (TCCC)n Simple_repeat Simple_repeat 1 41 0 5 1568 966 100 0 0 chrX 128900217 128900356 -37749940 + (TTTC)n Simple_repeat Simple_repeat 2 141 0 5 1568 945 133 0 0 chrX 128900357 128900492 -37749804 - B1_Mus2 SINE Alu -12 135 1 5 1568 348 358 109 13 chrX 128900513 128900742 -37749554 + L2c LINE L2 2547 2797 -622 5 1568 360 94 0 0 chrX 128901102 128901155 -37749141 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1568 253 382 66 25 chrX 128901458 128901702 -37748594 + L3 LINE CR1 4194 4447 -42 5 1568 268 237 71 0 chrX 128901914 128901988 -37748308 + L2c LINE L2 3317 3425 -1 5 1568 340 350 97 60 chrX 128902261 128902580 -37747716 - MLT1C LTR MaLR -2 465 135 5 1568 207 114 0 0 chrX 128902610 128902645 -37747651 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1568 181 314 100 0 chrX 128902951 128903021 -37747275 - MIR SINE MIR -184 78 2 5 1568 366 80 0 0 chrX 128903035 128903085 -37747211 + (TTTTA)n Simple_repeat Simple_repeat 4 53 0 5 1568 387 325 23 69 chrX 128903264 128903482 -37746814 - MIRb SINE MIR -1 267 60 5 1568 402 39 0 0 chrX 128903850 128903902 -37746394 + (A)n Simple_repeat Simple_repeat 1 52 0 5 1568 236 288 91 0 chrX 128904234 128904300 -37745996 + MER91C DNA Tip100 48 119 -21 5 1568 185 206 0 0 chrX 128905001 128905035 -37745261 - MIRb SINE MIR -9 259 226 5 1568 279 79 0 0 chrX 128905486 128905524 -37744772 + (A)n Simple_repeat Simple_repeat 1 38 0 5 1568 186 43 0 0 chrX 128906934 128906957 -37743339 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 5 1568 198 0 0 0 chrX 128907634 128907656 -37742640 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1568 1321 242 53 7 chrX 128909478 128909782 -37740514 + Lx7 LINE L1 6391 6708 -988 5 1568 1635 210 78 132 chrX 128909770 128909922 -37740374 + Lx7 LINE L1 7073 7224 -472 5 1568 1203 243 116 58 chrX 128909922 128910320 -37739976 - MTC LTR MaLR 0 421 1 5 1568 1635 210 78 132 chrX 128910320 128910820 -37739476 + Lx7 LINE L1 7225 7690 -6 5 1568 6186 157 43 59 chrX 128910846 128912817 -37737479 - Lx2B LINE L1 -35 7023 4957 5 1568 2804 186 19 3 chrX 128912786 128913407 -37736889 - Lx2B LINE L1 -3848 2038 1408 5 1568 16529 85 7 1 chrX 128913409 128916364 -37733932 - L1Md_F2 LINE L1 0 6582 3638 5 1568 576 242 188 50 chrX 128916410 128916649 -37733647 + RLTR10A LTR ERVK 140 411 0 5 1568 784 96 0 0 chrX 128916649 128916764 -37733532 - L1Md_F LINE L1 -2232 3651 3537 5 1568 2521 139 74 2 chrX 128916760 128917193 -37733103 - L1Md_F LINE L1 -5673 943 480 5 1568 1784 182 80 31 chrX 128917194 128917773 -37732523 - L1VL1 LINE L1 -5968 454 1 5 1568 2636 161 6 10 chrX 128917772 128918342 -37731954 - L1VL4 LINE L1 -2487 1072 500 5 1568 1877 133 13 6 chrX 128918596 128918914 -37731382 + L1_Mus4 LINE L1 6309 6628 -8 5 1568 509 307 50 30 chrX 128918971 128919169 -37731127 + B3 SINE B2 1 202 -14 5 1568 269 330 64 0 chrX 128921620 128921714 -37728582 - ID_B1 SINE B4 -15 209 110 5 1568 869 62 76 15 chrX 128921715 128921847 -37728449 + L1_Mus1 LINE L1 6424 6563 -4 5 1568 438 20 0 0 chrX 128922103 128922154 -37728142 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1568 656 112 0 18 chrX 128923159 128923268 -37727028 + (TTTC)n Simple_repeat Simple_repeat 2 108 0 5 1568 298 327 62 0 chrX 128923271 128923433 -37726863 - L1MB1 LINE L1 -19 6149 5978 5 1568 1154 269 50 64 chrX 128923563 128924003 -37726293 - L1MB1 LINE L1 -389 5779 5346 5 1568 1414 188 20 20 chrX 128924217 128924516 -37725780 - Lx4B LINE L1 -4 7054 6756 5 1568 1898 232 66 120 chrX 128924524 128925513 -37724783 - RMER17B LTR ERVK -9 899 41 5 1568 2507 170 74 9 chrX 128925513 128926000 -37724296 - Lx4B LINE L1 -323 6735 6165 5 1568 630 274 75 59 chrX 128926125 128926311 -37723985 - B3 SINE B2 -5 190 2 5 1568 382 330 79 57 chrX 128926352 128926969 -37723327 - L1MEg LINE L1 -4068 2016 1386 5 1568 382 250 19 9 chrX 128926986 128927105 -37723191 + B1F SINE Alu 30 149 0 5 1568 342 98 0 0 chrX 128927180 128927231 -37723065 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 1568 272 325 72 18 chrX 128927407 128927623 -37722673 - L1M3c LINE L1 -4520 2199 1956 6 1568 180 0 0 0 chrX 128927661 128927681 -37722615 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 1568 21 0 0 0 chrX 128927845 128927866 -37722430 + AT_rich Low_complexity Low_complexity 1 21 0 6 1568 234 81 0 0 chrX 128928158 128928195 -37722101 + (A)n Simple_repeat Simple_repeat 1 37 0 6 1568 2515 218 17 8 chrX 128928629 128929151 -37721145 - RLTR11A2 LTR ERVK 0 527 1 6 1568 333 298 160 20 chrX 128930588 128930818 -37719478 + MLT2C2 LTR ERVL 1 260 -154 6 1568 270 0 0 0 chrX 128930828 128930858 -37719438 + (TC)n Simple_repeat Simple_repeat 1 30 0 6 1568 432 0 0 0 chrX 128930858 128930905 -37719391 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1568 454 272 26 19 chrX 128931028 128931202 -37719094 + L1M3 LINE L1 5437 5618 -682 6 1568 4166 107 47 10 chrX 128931229 128931850 -37718446 - L1_Mus3 LINE L1 -10 6628 5985 6 1568 406 169 12 0 chrX 128931867 128931950 -37718346 - L1_Mm LINE L1 -1200 4683 4600 6 1568 2539 142 72 16 chrX 128931950 128932504 -37717792 - L1_Mus2 LINE L1 0 6584 5952 6 1568 4989 130 6 25 chrX 128932503 128933524 -37716772 - L1_Mm LINE L1 -404 5479 4532 6 1568 611 301 114 48 chrX 128933534 128934594 -37715702 - L1M2 LINE L1 -1978 4165 3036 6 1568 30230 105 14 9 chrX 128934895 128940143 -37710153 + L1Md_F2 LINE L1 241 5586 -297 6 1568 6870 102 3 2 chrX 128940143 128941119 -37709177 + L1Md_F2 LINE L1 5587 6563 -19 6 1568 302 0 0 0 chrX 128941140 128941175 -37709121 - U2 snRNA snRNA -153 35 1 6 1568 1175 219 109 0 chrX 128941185 128941441 -37708855 - ORR1B1 LTR MaLR -64 330 47 6 1568 1695 292 116 18 chrX 128941442 128941581 -37708715 - Lx8 LINE L1 -431 7042 6899 6 1568 3537 85 0 16 chrX 128941581 128942070 -37708226 - L1Md_F2 LINE L1 -2 6580 6100 6 1568 1695 292 116 18 chrX 128942070 128942603 -37707693 - Lx8 LINE L1 -575 6898 6304 6 1568 207 114 0 0 chrX 128942603 128942638 -37707658 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1568 1710 258 19 2 chrX 128942790 128943202 -37707094 + MTC LTR MaLR 1 419 -2 6 1568 1186 313 49 18 chrX 128943424 128943974 -37706322 - Lx8 LINE L1 -39 5841 5275 6 1568 303 320 80 35 chrX 128943994 128944195 -37706101 - L1M2 LINE L1 -3127 3016 2807 6 1568 647 194 15 0 chrX 128944902 128945036 -37705260 - URR1A DNA MER1_type -33 193 58 6 1568 325 214 112 46 chrX 128944914 128945066 -37705230 + CYRA11_Mm Unknown Y-chromosome 220 381 -236 6 1568 27 62 0 0 chrX 128945373 128945421 -37704875 + AT_rich Low_complexity Low_complexity 1 48 0 6 1568 421 273 0 10 chrX 128945446 128945546 -37704750 - ID_B1 SINE B4 -4 220 122 6 1568 783 334 101 40 chrX 128945915 128946492 -37703804 - MLT1E1A LTR MaLR 0 680 69 6 1568 696 78 0 0 chrX 128946870 128946960 -37703336 - B1_Mus2 SINE Alu -8 139 50 6 1568 35 0 0 0 chrX 128947464 128947499 -37702797 + AT_rich Low_complexity Low_complexity 1 35 0 6 1568 698 326 49 26 chrX 128948035 128948367 -37701929 + Lx8 LINE L1 6987 7327 -146 6 1568 375 41 0 0 chrX 128948367 128948416 -37701880 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1568 698 326 49 26 chrX 128948416 128948432 -37701864 + Lx8 LINE L1 7328 7343 -130 6 1568 26 30 0 0 chrX 128948549 128948582 -37701714 + AT_rich Low_complexity Low_complexity 1 33 0 6 1568 9935 114 10 24 chrX 128948584 128951227 -37699069 - Lx3A LINE L1 -8 6973 4369 6 1568 1207 40 0 0 chrX 128951610 128951761 -37698535 + L1_Mus1 LINE L1 6417 6567 0 6 1568 492 160 28 28 chrX 128952275 128952384 -37697912 - MYSERV16_I-int LTR ERVK -727 1599 1491 6 1568 5088 142 30 24 chrX 128952385 128953246 -37697050 - Lx LINE L1 -6 6648 5783 6 1568 723 168 68 0 chrX 128953240 128953401 -37696895 - Lx LINE L1 0 6654 6483 6 1568 287 122 0 0 chrX 128953408 128953449 -37696847 - Lx2 LINE L1 -542 6455 6415 6 1568 465 345 0 0 chrX 128954257 128954376 -37695920 + B3A SINE B2 5 123 -75 6 1568 6974 120 30 5 chrX 128954404 128955967 -37694329 - L1_Mus3 LINE L1 -5 6633 5037 6 1568 2085 167 0 0 chrX 128955968 128956333 -37693963 - L1_Mus3 LINE L1 -1482 4401 4037 6 1568 1543 261 46 40 chrX 128956948 128957037 -37693259 - RMER1B Other Other -52 1014 935 6 1568 330 80 0 0 chrX 128957037 128957087 -37693209 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 6 1568 1543 274 38 34 chrX 128957087 128957526 -37692770 - RMER1B Other Other -132 934 334 6 1568 455 297 93 11 chrX 128957817 128958084 -37692212 - MLT2B4 LTR ERVL -39 517 179 6 1568 412 309 95 0 chrX 128958882 128959008 -37691288 + RSINE1 SINE B4 11 148 -17 6 1568 279 79 0 0 chrX 128959020 128959058 -37691238 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1568 306 0 0 0 chrX 128959062 128959096 -37691200 + (GA)n Simple_repeat Simple_repeat 1 34 0 6 1568 349 272 83 39 chrX 128959382 128959562 -37690734 + L1M4b LINE L1 1889 2076 -5258 6 1568 3735 148 51 6 chrX 128959685 128960337 -37689959 + L1ME5 LINE L1 5111 5820 -374 6 1568 3524 195 4 10 chrX 128960337 128961012 -37689284 + Lx LINE L1 5984 6654 0 6 1568 1089 321 43 36 chrX 128961012 128961092 -37689204 + L1ME5 LINE L1 5821 5892 -302 6 1568 4172 128 19 5 chrX 128961274 128961940 -37688356 - L1_Mm LINE L1 -292 5591 4916 6 1568 4754 99 5 6 chrX 128961935 128962606 -37687690 + L1_Mus3 LINE L1 5934 6603 -35 6 1568 320 315 54 33 chrX 128962653 128962745 -37687551 + RSINE1 SINE B4 3 96 -69 6 1568 1949 158 3 10 chrX 128964280 128964593 -37685703 + RLTR10E LTR ERVK 1 311 0 6 1568 1232 66 13 6 chrX 128964593 128964779 -37685517 + RLTR10-int LTR ERVK 1 202 -1785 6 1568 246 283 0 0 chrX 128964779 128964832 -37685464 + RLTR27 LTR ERVK 223 275 -34 6 1568 380 23 0 0 chrX 128964832 128964875 -37685421 + RLTR10-int LTR ERVK 225 267 -7314 6 1568 286 65 114 25 chrX 128964964 128965043 -37685253 + GA-rich Low_complexity Low_complexity 3 88 0 6 1568 3452 56 16 5 chrX 128965043 128965477 -37684819 + RLTR10-int LTR ERVK 566 1004 -983 6 1568 434 329 30 26 chrX 128965608 128965888 -37684408 + IAP-d-int LTR ERVK 822 1061 -5481 6 1568 1454 128 112 0 chrX 128965887 128966137 -37684159 + IAP-d-int LTR ERVK 4977 5254 -1288 6 1568 3839 127 14 8 chrX 128966138 128966812 -37683484 + IAPEY3-int LTR ERVK 6965 7671 -9 6 1568 539 374 6 6 chrX 128967138 128967294 -37683002 - RSINE1 SINE B4 -8 157 2 6 1568 443 161 72 24 chrX 128967779 128967862 -37682434 + B4 SINE B4 5 91 -201 6 1568 2552 27 0 0 chrX 128968332 128968629 -37681667 + L1Md_A LINE L1 6283 6579 -3 6 1568 343 245 121 40 chrX 128969085 128969234 -37681062 - B2_Mm2 SINE B2 -33 162 2 6 1568 24 0 0 0 chrX 128969276 128969300 -37680996 + AT_rich Low_complexity Low_complexity 1 24 0 6 1568 201 232 40 40 chrX 128969479 128969578 -37680718 + A-rich Low_complexity Low_complexity 2 100 0 6 1568 1649 284 82 67 chrX 128969578 128969966 -37680330 - Lx7 LINE L1 -384 7312 6919 6 1568 1016 67 0 7 chrX 128969966 128970101 -37680195 + B1_Mus1 SINE Alu 3 136 -12 6 1568 248 0 31 0 chrX 128970101 128970133 -37680163 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 6 1568 1649 284 82 67 chrX 128970133 128970565 -37679731 - Lx7 LINE L1 -778 6918 6480 6 1568 494 274 165 8 chrX 128970575 128970829 -37679467 - Lx7 LINE L1 -1470 6226 5933 6 1568 188 34 0 33 chrX 128971379 128971409 -37678887 + (TTATA)n Simple_repeat Simple_repeat 5 33 0 6 1568 4034 222 43 39 chrX 128971521 128972506 -37677790 - Lx5 LINE L1 -4 7046 6058 6 1568 28 0 0 0 chrX 128973637 128973665 -37676631 + AT_rich Low_complexity Low_complexity 1 28 0 6 24 1763 176 19 78 chrX 128974452 128974858 -37675438 + ORR1B1 LTR MaLR 3 386 -8 6 1569 1178 229 22 25 chrX 128975595 128975873 -37674423 - Lx6 LINE L1 -5 7455 7179 6 1569 849 142 73 69 chrX 128975870 128976074 -37674222 + Lx2B LINE L1 6784 6988 -12 6 1569 1581 228 144 12 chrX 128976101 128976506 -37673790 - Lx6 LINE L1 -218 7478 6756 6 1569 3830 180 47 4 chrX 128976523 128977230 -37673066 - RMER19A LTR ERVK 0 737 1 6 1569 661 256 26 0 chrX 128977251 128977407 -37672889 - Lx6 LINE L1 -737 6723 6564 6 1569 4160 228 32 21 chrX 128977383 128978666 -37671630 - Lx6 LINE L1 -1271 6189 4880 6 1569 270 81 0 0 chrX 128979087 128979124 -37671172 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 1569 501 32 0 0 chrX 128979124 128979186 -37671110 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1569 692 265 47 19 chrX 128979186 128979401 -37670895 + Lx8 LINE L1 6765 6985 -488 6 1569 646 289 142 41 chrX 128979428 128979746 -37670550 + Lx8 LINE L1 7050 7399 -74 6 1569 188 320 9 74 chrX 128980381 128980489 -37669807 + MIRb SINE MIR 91 191 -77 6 1569 533 265 35 76 chrX 128983063 128983329 -37666967 + L1MA4 LINE L1 5652 5907 -393 6 1569 409 259 127 83 chrX 128983727 128983908 -37666388 + RMER30 DNA MER1_type 10 198 -4 6 1569 1411 251 99 15 chrX 128984095 128984246 -37666050 - Lx6 LINE L1 -11 7449 7269 6 1569 2983 124 7 9 chrX 128984246 128984710 -37665586 + Lx3A LINE L1 6505 6967 -14 6 1569 180 0 0 0 chrX 128984710 128984730 -37665566 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 6 1569 1411 251 99 15 chrX 128984730 128984969 -37665327 - Lx6 LINE L1 -192 7268 7026 6 1569 22 35 0 0 chrX 128984972 128985001 -37665295 + AT_rich Low_complexity Low_complexity 1 29 0 6 1569 31 26 0 0 chrX 128985223 128985261 -37665035 + AT_rich Low_complexity Low_complexity 1 38 0 6 1569 264 260 178 0 chrX 128985288 128985361 -37664935 - RSINE1 SINE B4 -67 98 13 6 1569 26 0 0 0 chrX 128985945 128985971 -37664325 + AT_rich Low_complexity Low_complexity 1 26 0 6 1569 282 356 11 30 chrX 128989154 128989301 -37660995 + MIRb SINE MIR 75 220 -48 6 1569 300 52 16 49 chrX 128989701 128989762 -37660534 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 6 1569 561 30 0 0 chrX 128990869 128990936 -37659360 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 6 1569 240 275 12 24 chrX 128993882 128993964 -37656332 + A-rich Low_complexity Low_complexity 1 81 0 6 1569 248 146 55 0 chrX 128994125 128994180 -37656116 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 6 1569 381 165 32 42 chrX 128995122 128995217 -37655079 - Lx9 LINE L1 -7 7637 7544 6 1569 992 241 150 25 chrX 128996516 128996877 -37653419 - Lx9 LINE L1 -1 7643 7238 6 1569 704 247 28 22 chrX 128996880 128997058 -37653238 + Lx9 LINE L1 7012 7190 -454 6 1569 338 286 12 18 chrX 128997064 128997078 -37653218 - L1_Mm LINE L1 -883 5417 5404 6 1569 4903 52 13 3 chrX 128997078 128997696 -37652600 - L1Md_F2 LINE L1 -12 6570 5947 6 1569 2948 66 3 0 chrX 128997696 128998084 -37652212 - L1_Mm LINE L1 -897 5403 4987 6 1569 6826 136 16 14 chrX 128998361 128999472 -37650824 - Lx LINE L1 -2 6652 5563 6 1569 269 304 25 0 chrX 128999520 128999599 -37650697 - B4A SINE B4 -18 274 194 6 1569 507 246 24 16 chrX 128999594 128999718 -37650578 + MTD LTR MaLR 36 160 -259 6 1569 1369 269 31 8 chrX 129000508 129000864 -37649432 + MTD LTR MaLR 56 419 0 1 1569 255 79 0 0 chrX 129001043 129001081 -37649215 + (T)n Simple_repeat Simple_repeat 1 38 0 2 1569 346 133 50 0 chrX 129001615 129001675 -37648621 + HAL1-3A_ME LINE L1 1950 2012 -846 3 1569 402 21 0 0 chrX 129001676 129001723 -37648573 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 1569 356 345 141 29 chrX 129001739 129001945 -37648351 + L1MEc LINE L1 126 354 -6046 5 1569 1893 210 18 0 chrX 129003045 129003430 -37646866 - ORR1B1 LTR MaLR 0 394 3 6 1569 2878 145 41 2 chrX 129004403 129004894 -37645402 - RLTR25A LTR ERVK -587 516 7 7 1569 501 243 0 9 chrX 129004897 129005009 -37645287 - Lx7 LINE L1 -1391 6305 6195 8 1569 2340 215 56 29 chrX 129005007 129005543 -37644753 + Lx6 LINE L1 6663 7476 -220 9 1569 510 193 0 33 chrX 129005546 129005637 -37644659 - B1_Mur3 SINE Alu -56 93 6 1 1569 320 270 0 92 chrX 129005554 129005652 -37644644 - ID_B1 SINE B4 -58 166 78 1 1569 477 0 0 0 chrX 129006742 129006795 -37643501 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1569 238 304 37 47 chrX 129007495 129007602 -37642694 + L2b LINE L2 3267 3372 -3 1 1569 483 18 0 0 chrX 129008407 129008463 -37641833 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 1569 627 355 74 37 chrX 129009129 129009588 -37640708 - L2a LINE L2 0 3426 2951 1 1569 684 74 0 0 chrX 129009952 129010047 -37640249 + (TG)n Simple_repeat Simple_repeat 2 96 0 1 1569 335 284 29 0 chrX 129010160 129010262 -37640034 - L1MA4A LINE L1 -374 5929 5825 1 1569 325 299 102 34 chrX 129010537 129010976 -37639320 - L1M2 LINE L1 -3231 2912 2444 1 1569 12082 199 42 56 chrX 129011884 129012616 -37637680 + L1_Mur2 LINE L1 889 1937 -3943 1 1569 1390 184 133 25 chrX 129012616 129012940 -37637356 - ORR1B1 LTR MaLR -8 386 28 2 1569 12082 199 42 56 chrX 129012940 129014123 -37636173 + L1_Mur2 LINE L1 1938 3637 -2243 1 1569 378 0 0 0 chrX 129014123 129014165 -37636131 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 2 1569 12082 183 43 13 chrX 129014165 129015685 -37634611 + L1_Mur2 LINE L1 3638 5204 -673 1 1569 3658 60 47 12 chrX 129015698 129016188 -37634108 + L1Md_F2 LINE L1 6064 6570 -12 2 1569 503 219 228 12 chrX 129016331 129016502 -37633794 - B3 SINE B2 -6 210 3 2 1569 5595 230 21 27 chrX 129016658 129017934 -37632362 + Lx5 LINE L1 5783 7050 0 2 1569 21 0 0 0 chrX 129018159 129018180 -37632116 + AT_rich Low_complexity Low_complexity 1 21 0 2 1569 24 32 0 0 chrX 129018405 129018436 -37631860 + AT_rich Low_complexity Low_complexity 1 31 0 2 1569 277 314 8 53 chrX 129018455 129018586 -37631710 - ID_B1 SINE B4 -3 221 97 2 1569 564 253 6 0 chrX 129018739 129018873 -37631423 - ORR1D-int LTR MaLR -1291 218 80 2 1569 456 19 0 0 chrX 129018944 129018997 -37631299 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 1569 301 84 47 24 chrX 129020232 129020317 -37629979 + T-rich Low_complexity Low_complexity 4 90 0 3 1569 1008 116 7 0 chrX 129020317 129020463 -37629833 - B1_Mus1 SINE Alu 0 148 2 3 1569 3327 50 34 7 chrX 129020599 129021037 -37629259 + L1Md_F3 LINE L1 6134 6583 -1 3 1569 381 109 0 0 chrX 129023110 129023174 -37627122 + (TG)n Simple_repeat Simple_repeat 2 65 0 3 1569 21 0 0 0 chrX 129023207 129023228 -37627068 + AT_rich Low_complexity Low_complexity 1 21 0 3 1569 2925 296 30 41 chrX 129023403 129024487 -37625809 + Lx7 LINE L1 6163 7234 -462 3 1569 191 62 62 0 chrX 129024499 129024531 -37625765 + (TATG)n Simple_repeat Simple_repeat 3 36 0 3 1569 636 372 89 23 chrX 129025270 129025868 -37624428 - L2 LINE L2 -601 2818 2182 3 1569 615 357 18 88 chrX 129025982 129026369 -37623927 + MER47B DNA MER2_type 39 398 -20 3 1569 245 269 12 60 chrX 129027053 129027136 -37623160 - MLT1A0 LTR MaLR -286 79 1 3 1569 234 352 18 36 chrX 129027242 129027354 -37622942 - PB1D10 SINE Alu -7 110 1 4 1569 24908 54 5 4 chrX 129027481 129027961 -37622335 - L1_Mm LINE L1 -534 5349 4877 4 1569 4723 50 0 0 chrX 129027961 129028543 -37621753 + L1Md_T LINE L1 6001 6582 0 4 1569 24908 54 5 4 chrX 129028543 129031270 -37619026 - L1_Mm LINE L1 -1007 4876 2140 4 1569 6007 50 4 1 chrX 129031268 129032036 -37618260 + L1Md_F2 LINE L1 5817 6582 0 4 1569 8684 110 26 41 chrX 129032059 129033437 -37616859 - Lx3_Mus LINE L1 0 7009 5662 4 1569 732 91 0 0 chrX 129033437 129033547 -37616749 + (GGAA)n Simple_repeat Simple_repeat 2 111 0 4 1569 3360 110 3 187 chrX 129033547 129033975 -37616321 - Lx3_Mus LINE L1 -218 5668 5302 4 1569 3481 3 0 0 chrX 129033975 129034363 -37615933 - L1Md_A LINE L1 0 6582 6195 4 1569 3360 110 3 187 chrX 129034363 129034381 -37615915 - Lx3_Mus LINE L1 -585 5301 5284 4 1569 13723 66 4 5 chrX 129035330 129037814 -37612482 - L1Md_F2 LINE L1 -9 6573 4091 4 1569 4910 89 4 14 chrX 129037809 129038529 -37611767 + L1Md_F2 LINE L1 3378 4090 -1793 4 1569 456 135 18 9 chrX 129038610 129038722 -37611574 + (TA)n Simple_repeat Simple_repeat 2 114 0 4 1569 1289 285 62 16 chrX 129038848 129039236 -37611060 - MTD LTR MaLR -8 411 6 4 1569 21 36 0 0 chrX 129039747 129039775 -37610521 + AT_rich Low_complexity Low_complexity 1 28 0 5 1569 359 55 0 18 chrX 129040565 129040620 -37609676 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 5 1569 1030 74 0 22 chrX 129040623 129040761 -37609535 - B1_Mus1 SINE Alu -13 135 1 5 1569 503 88 441 0 chrX 129041038 129041140 -37609156 + B1_Mus2 SINE Alu 1 147 0 5 1569 458 249 182 22 chrX 129041442 129041623 -37608673 + B3 SINE B2 1 210 -6 5 1569 1175 290 67 9 chrX 129042025 129042356 -37607940 + RMER1B Other Other 47 396 -670 5 1569 2107 265 70 52 chrX 129042359 129043371 -37606925 + RMER1B Other Other 23 1055 -11 5 1569 315 233 38 151 chrX 129043556 129043662 -37606634 - B1F SINE Alu -1 116 23 5 1569 25 31 0 0 chrX 129044312 129044344 -37605952 + AT_rich Low_complexity Low_complexity 1 32 0 5 1569 27 103 0 0 chrX 129044694 129044791 -37605505 + AT_rich Low_complexity Low_complexity 1 97 0 5 1569 567 249 155 0 chrX 129045121 129045302 -37604994 - ORR1D1 LTR MaLR 0 374 166 6 1569 294 290 0 0 chrX 129045345 129045414 -37604882 - ORR1D1 LTR MaLR -305 69 1 6 1569 22 80 0 0 chrX 129045558 129045608 -37604688 + AT_rich Low_complexity Low_complexity 1 50 0 6 1569 26 0 0 0 chrX 129045738 129045764 -37604532 + AT_rich Low_complexity Low_complexity 1 26 0 6 1569 1737 314 59 26 chrX 129046255 129046946 -37603350 + Lx7 LINE L1 6587 7300 -396 6 1569 522 0 0 0 chrX 129046951 129047009 -37603287 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 1569 1925 212 24 2 chrX 129047204 129047624 -37602672 - L1_Mur3 LINE L1 -782 5098 4670 6 1569 13474 167 38 6 chrX 129047627 129051381 -37598915 - L1Md_F2 LINE L1 -3 6579 2698 6 1569 22 0 0 0 chrX 129052083 129052105 -37598191 + AT_rich Low_complexity Low_complexity 1 22 0 6 1569 35109 59 5 14 chrX 129052169 129058302 -37591994 - L1Md_F2 LINE L1 -7 6575 505 6 1569 2748 236 21 19 chrX 129058426 129059006 -37591290 + Lx5 LINE L1 6470 7050 0 6 1569 201 133 0 0 chrX 129059008 129059038 -37591258 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 7 1569 256 171 0 79 chrX 129059189 129059278 -37591018 + A-rich Low_complexity Low_complexity 1 82 0 7 1569 212 296 0 0 chrX 129059388 129059432 -37590864 + L2 LINE L2 2843 2886 -533 7 1569 185 385 107 35 chrX 129059942 129060373 -37589923 + L3 LINE CR1 3949 4410 -79 7 1569 183 42 0 0 chrX 129061261 129061285 -37589011 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 7 1569 610 204 0 9 chrX 129061724 129061838 -37588458 + L1_Mur2 LINE L1 5099 5211 -666 7 1569 707 224 145 27 chrX 129061838 129062099 -37588197 - L1_Rod LINE L1 -1484 4363 4091 7 1569 2852 145 142 13 chrX 129062475 129063032 -37587264 - Lx2 LINE L1 -6 6991 6363 7 1569 1345 184 59 0 chrX 129063031 129063302 -37586994 + L1_Mur2 LINE L1 4811 5097 -780 7 1569 230 58 75 19 chrX 129063338 129063391 -37586905 + (TTTG)n Simple_repeat Simple_repeat 3 58 0 7 1569 1572 262 44 22 chrX 129063391 129063600 -37586696 + MTD LTR MaLR 1 210 -209 8 1569 1734 135 53 34 chrX 129063600 129063921 -37586375 + ORR1A2 LTR MaLR 1 327 0 8 1569 1572 262 44 22 chrX 129063921 129064121 -37586175 + MTD LTR MaLR 211 419 0 8 1569 1300 94 39 0 chrX 129064305 129064485 -37585811 - B2_Mm2 SINE B2 -8 187 1 8 1569 229 297 101 25 chrX 129064623 129064700 -37585596 - Lx6 LINE L1 -157 7539 7453 8 1569 921 185 37 0 chrX 129064700 129064889 -37585407 + Lx LINE L1 6452 6647 -7 8 1569 363 307 80 15 chrX 129064889 129065027 -37585269 - Lx6 LINE L1 -271 7189 7046 8 1569 229 265 0 0 chrX 129065015 129065064 -37585232 + Lx6 LINE L1 6941 6989 -471 8 1569 887 354 116 26 chrX 129065072 129065535 -37584761 + MTE-int LTR MaLR 833 1342 -238 8 1569 252 0 0 0 chrX 129065535 129065563 -37584733 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 1569 887 354 116 26 chrX 129065563 129065590 -37584706 + MTE-int LTR MaLR 1343 1367 -213 8 1569 293 389 0 34 chrX 129065615 129065732 -37584564 + RSINE1 SINE B4 9 121 -44 8 1569 949 141 48 11 chrX 129065757 129065944 -37584352 - B2_Mm2 SINE B2 -1 194 1 8 1569 479 293 41 0 chrX 129066005 129066128 -37584168 + MTE-int LTR MaLR 1427 1554 -26 8 1569 1310 90 5 0 chrX 129066128 129066316 -37583980 + L1_Mus2 LINE L1 6367 6555 -11 8 1569 22 0 0 0 chrX 129066325 129066347 -37583949 + AT_rich Low_complexity Low_complexity 1 22 0 9 1569 373 286 318 57 chrX 129066419 129066669 -37583627 + MTE2a LTR MaLR 57 372 -7 9 1569 276 77 0 0 chrX 129066694 129066733 -37583563 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 1569 555 43 0 0 chrX 129067243 129067313 -37582983 + (TG)n Simple_repeat Simple_repeat 2 71 0 9 1569 1058 97 7 0 chrX 129067367 129067512 -37582784 + B1_Mus1 SINE Alu 2 147 -1 9 1569 236 91 0 22 chrX 129067512 129067557 -37582739 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 9 1569 309 254 7 51 chrX 129068917 129069054 -37581242 + L1M2 LINE L1 4561 4691 -1449 9 1569 257 333 106 29 chrX 129069103 129069273 -37581023 + L1M2 LINE L1 4797 4979 -1164 9 1569 882 151 36 36 chrX 129069395 129069560 -37580736 + B2_Mm2 SINE B2 3 167 -28 9 1569 7781 15 0 0 chrX 129069561 129070451 -37579845 + L1Md_T LINE L1 4697 5586 -297 9 1569 8885 9 0 0 chrX 129070451 129071447 -37578849 + L1Md_T LINE L1 5587 6582 0 9 1569 385 315 23 5 chrX 129071552 129071769 -37578527 + L1M2 LINE L1 5106 5326 -817 9 1569 180 0 0 0 chrX 129071770 129071790 -37578506 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 9 1569 943 307 131 49 chrX 129071791 129072350 -37577946 - Lx6 LINE L1 -26 7434 6455 1 1569 189 366 0 90 chrX 129074128 129074239 -37576057 - L2c LINE L2 -13 3374 3274 1 1569 279 298 97 45 chrX 129074968 129075353 -37574943 - L1MB7 LINE L1 -258 5926 5509 1 1569 234 0 0 0 chrX 129075535 129075561 -37574735 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1 1569 1455 308 48 29 chrX 129075902 129076692 -37573604 - Lx5 LINE L1 -18 7032 6451 1 1569 2341 188 94 84 chrX 129076791 129077396 -37572900 - RMER19C LTR ERVK 0 611 1 1 1569 6769 174 61 26 chrX 129078283 129078759 -37571537 - Lx4A LINE L1 -42 7016 6496 1 1569 1254 92 0 11 chrX 129078759 129078946 -37571350 + L1Md_F2 LINE L1 6385 6569 -13 1 1569 11646 169 140 28 chrX 129078946 129081764 -37568532 - Lx4A LINE L1 -563 6495 3316 1 1569 204 40 0 0 chrX 129081764 129081789 -37568507 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 1569 11646 167 162 29 chrX 129081789 129082465 -37567831 - Lx4A LINE L1 -2571 3315 2633 1 1569 1652 172 66 0 chrX 129082516 129082835 -37567461 + Lx LINE L1 6307 6646 -8 1 1569 1037 218 143 21 chrX 129082867 129083252 -37567044 + L1MA8 LINE L1 5854 6285 -6 1 1569 1417 34 0 33 chrX 129083512 129083692 -37566604 - B2_Mm1a SINE B2 -19 174 1 1 1569 5188 84 11 3 chrX 129083938 129084652 -37565644 + L1_Mus1 LINE L1 5848 6567 0 1 1569 461 301 155 30 chrX 129084696 129085025 -37565271 + ORR1D2 LTR MaLR 1 370 0 1 1569 472 304 92 52 chrX 129085164 129085393 -37564903 + MT2A LTR ERVL 1 238 -295 1 1569 277 292 74 55 chrX 129085672 129085835 -37564461 + Lx8 LINE L1 6101 6266 -1207 1 1569 1789 318 41 9 chrX 129085958 129086636 -37563660 + Lx8 LINE L1 6328 7027 -446 1 1569 720 318 83 23 chrX 129086666 129087014 -37563282 + Lx8 LINE L1 7099 7467 -6 1 1569 470 92 0 26 chrX 129087224 129087302 -37562994 + (TATG)n Simple_repeat Simple_repeat 3 78 0 1 1569 1322 268 74 56 chrX 129087311 129087815 -37562481 - RMER1B Other Other -552 514 45 1 1569 1778 288 57 19 chrX 129088970 129089655 -37560641 - Lx5 LINE L1 -18 7032 6456 1 1569 1764 248 87 17 chrX 129089664 129090183 -37560113 + Lx5 LINE L1 5877 6423 -627 1 1569 3710 228 34 5 chrX 129090216 129090980 -37559316 - Lx5 LINE L1 -11 7039 6254 1 1569 2568 183 49 24 chrX 129091003 129091551 -37558745 + Lx5 LINE L1 5662 6223 -827 1 1569 23 33 0 0 chrX 129091855 129091885 -37558411 + AT_rich Low_complexity Low_complexity 1 30 0 1 1569 2353 51 0 0 chrX 129091886 129092180 -37558116 - L1Md_A LINE L1 0 6582 6289 1 1569 7222 115 10 1 chrX 129092451 129093654 -37556642 - L1_Mus4 LINE L1 -8 6628 5409 1 1569 1322 267 59 9 chrX 129094086 129094426 -37555870 + ORR1D2 LTR MaLR 6 362 -8 1 1569 26 50 0 0 chrX 129094559 129094599 -37555697 + AT_rich Low_complexity Low_complexity 1 40 0 1 1569 6420 84 19 1 chrX 129095199 129096073 -37554223 - L1_Mus1 LINE L1 0 6567 5678 1 1569 227 290 29 0 chrX 129096535 129096604 -37553692 + MLT1A1 LTR MaLR 322 392 -16 1 1569 1100 137 63 0 chrX 129096705 129096910 -37553386 + Lx2 LINE L1 6778 6995 -2 1 1569 37691 12 0 0 chrX 129097059 129102471 -37547825 + L1Md_A LINE L1 173 5586 -297 1 1569 8979 5 0 0 chrX 129102471 129103467 -37546829 + L1Md_A LINE L1 5587 6582 0 1 1569 412 225 62 1 chrX 129103932 129104098 -37546198 - ORR1D2 LTR MaLR 0 379 221 1 1569 232 280 0 36 chrX 129104592 129104703 -37545593 + Lx5 LINE L1 6941 7047 -3 1 1569 3025 43 43 0 chrX 129105247 129105616 -37544680 - IAPEY_LTR LTR ERVK 0 385 1 1 1569 1416 99 18 18 chrX 129105690 129105916 -37544380 + Lx3_Mus LINE L1 6784 7009 0 1 1570 243 198 240 0 chrX 129106008 129106104 -37544192 - Lx9 LINE L1 -78 7566 7448 1 1570 1961 238 23 110 chrX 129106119 129106220 -37544076 + Lx9 LINE L1 6788 6878 -766 1 1570 894 106 0 0 chrX 129106220 129106352 -37543944 + (TCTCC)n Simple_repeat Simple_repeat 5 136 0 1 1570 1961 238 23 110 chrX 129106352 129106373 -37543923 + Lx9 LINE L1 6879 6879 -765 1 1570 1080 103 0 0 chrX 129106373 129106519 -37543777 - B1_Mus2 SINE Alu -1 146 1 1 1570 1961 238 23 110 chrX 129106519 129107041 -37543255 + Lx9 LINE L1 6879 7377 -267 1 1570 25 75 0 0 chrX 129107110 129107163 -37543133 + AT_rich Low_complexity Low_complexity 1 53 0 1 1570 663 338 134 28 chrX 129107177 129107795 -37542501 + L1M5 LINE L1 2128 2811 -3335 1 1570 588 341 40 52 chrX 129107849 129108273 -37542023 + L1MD LINE L1 3128 3546 -2600 1 1570 532 344 21 21 chrX 129108766 129108959 -37541337 + MER47B DNA MER2_type 78 270 -148 1 1570 756 239 45 41 chrX 129109251 129109517 -37540779 + L1MD LINE L1 3592 3858 -2288 1 1570 2342 294 13 20 chrX 129109510 129110228 -37540068 + Lx7 LINE L1 6616 7327 -369 1 1570 207 0 0 0 chrX 129110228 129110251 -37540045 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1570 2342 294 13 20 chrX 129110251 129110283 -37540013 + Lx7 LINE L1 7328 7360 -336 1 1570 331 228 39 19 chrX 129110315 129110418 -37539878 + Lx7 LINE L1 7565 7669 -27 1 1570 1399 209 92 40 chrX 129110418 129110497 -37539799 + ORR1C1 LTR MaLR 1 83 -295 1 1570 1624 25 0 0 chrX 129110497 129110695 -37539601 + L1Md_F3 LINE L1 6372 6569 -15 1 1570 1399 209 92 40 chrX 129110695 129110963 -37539333 + ORR1C1 LTR MaLR 84 366 -12 1 1570 259 301 26 0 chrX 129111102 129111215 -37539081 + L1MD LINE L1 3972 4087 -2059 1 1570 226 284 0 0 chrX 129111603 129111677 -37538619 + L1M1 LINE L1 5816 5889 -411 1 1570 847 48 0 16 chrX 129111784 129111911 -37538385 + L1Md_F3 LINE L1 6458 6582 -2 1 1570 36523 38 2 7 chrX 129111993 129117381 -37532915 + L1Md_A LINE L1 231 5586 -297 1 1570 8228 40 1 0 chrX 129117381 129118374 -37531922 + L1Md_A LINE L1 5587 6580 -2 1 1570 38 61 0 0 chrX 129118426 129118492 -37531804 + AT_rich Low_complexity Low_complexity 1 66 0 1 1570 345 300 98 30 chrX 129118623 129118972 -37531324 + L1MB8 LINE L1 5613 5998 -181 1 1570 946 284 139 34 chrX 129119153 129119708 -37530588 + Lx7 LINE L1 188 800 -6928 1 1570 4651 55 0 0 chrX 129119706 129120434 -37529862 - L1Md_F2 LINE L1 -420 6162 5435 1 1570 1791 103 30 4 chrX 129120434 129120697 -37529599 + L1_Mus1 LINE L1 6298 6567 0 1 1570 6636 196 72 6 chrX 129120698 129121882 -37528414 + Lx7 LINE L1 787 2056 -3824 1 1570 402 57 0 0 chrX 129121882 129121935 -37528361 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1570 405 0 0 0 chrX 129121935 129121979 -37528317 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 1570 6636 185 66 8 chrX 129121979 129122693 -37527603 + Lx7 LINE L1 2057 2808 -3072 1 1570 246 42 20 40 chrX 129122696 129122746 -37527550 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1 1570 979 191 18 23 chrX 129122800 129123020 -37527276 + Lx LINE L1 6436 6654 0 1 1570 1226 213 97 19 chrX 129123010 129123441 -37526855 + Lx7 LINE L1 2874 3338 -2542 1 1570 4981 72 13 45 chrX 129123445 129124157 -37526139 + L1_Mus2 LINE L1 5878 6566 0 1 1570 262 191 58 14 chrX 129124232 129124301 -37525995 + Lx7 LINE L1 7405 7476 -220 1 1570 13524 55 12 0 chrX 129124334 129126723 -37523573 - L1Md_F2 LINE L1 0 6582 4167 1 1570 3803 66 0 0 chrX 129126723 129127221 -37523075 + L1_Mm LINE L1 3750 4247 -1636 1 1570 10028 184 24 47 chrX 129127324 129127480 -37522816 + Lx7 LINE L1 3687 3835 -2045 1 1570 3679 144 13 7 chrX 129127480 129128088 -37522208 + Lx LINE L1 6041 6652 -2 1 1570 10028 205 32 60 chrX 129128088 129131247 -37519049 + Lx7 LINE L1 3836 6943 -753 1 1570 689 142 175 0 chrX 129131247 129131367 -37518929 + B1_Mus1 SINE Alu 4 144 -4 1 1570 567 0 0 0 chrX 129131367 129131430 -37518866 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 1570 5791 248 48 85 chrX 129131430 129132075 -37518221 + Lx7 LINE L1 6944 7536 -160 1 1570 27 0 0 0 chrX 129132305 129132332 -37517964 + AT_rich Low_complexity Low_complexity 1 27 0 1 1570 244 292 11 11 chrX 129133806 129133896 -37516400 - L1MC LINE L1 -873 5273 5184 1 1570 247 362 82 30 chrX 129133979 129134210 -37516086 - MLT1A1 LTR MaLR -12 396 154 1 1570 468 0 0 0 chrX 129134224 129134276 -37516020 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 1 1570 517 194 97 0 chrX 129134285 129134388 -37515908 - PB1D9 SINE Alu -7 113 1 1 1570 877 176 0 0 chrX 129134406 129134559 -37515737 + RMER19B LTR ERVK 750 902 0 1 1570 384 238 63 0 chrX 129134663 129134789 -37515507 - L1M5 LINE L1 -1501 4645 4512 1 1570 262 279 16 16 chrX 129134839 129134901 -37515395 + MLT-int LTR MaLR 688 749 -986 1 1570 180 0 0 0 chrX 129135090 129135110 -37515186 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1570 1080 242 67 40 chrX 129135244 129135541 -37514755 - MTC LTR MaLR -7 414 110 1 1570 3200 106 11 4 chrX 129135563 129136035 -37514261 + Lx3_Mus LINE L1 6517 6991 -18 1 1570 312 167 0 15 chrX 129136048 129136115 -37514181 + MusHAL1 LINE L1 1594 1659 -1053 1 1570 2198 206 2 7 chrX 129136187 129136727 -37513569 + Lx4B LINE L1 5501 6038 -1020 1 1570 939 28 0 0 chrX 129136710 129136818 -37513478 + L1Md_F2 LINE L1 5479 5586 -297 1 1570 7648 66 10 5 chrX 129136818 129137808 -37512488 + L1Md_F2 LINE L1 5587 6581 -1 1 1570 1069 241 15 11 chrX 129137809 129138069 -37512227 + Lx4B LINE L1 6015 6275 -783 1 1570 6571 191 24 30 chrX 129138065 129139605 -37510691 + L1_Mur1 LINE L1 2303 3833 -2044 1 1570 2900 160 55 19 chrX 129139603 129140169 -37510127 - L1_Mur2 LINE L1 -1329 4548 3963 1 1570 5881 198 41 5 chrX 129140167 129141624 -37508672 + Lx4B LINE L1 5442 6981 -19 1 1570 1747 191 36 19 chrX 129141636 129142052 -37508244 + L1_Mur1 LINE L1 3820 4242 -1635 1 1570 1840 117 84 3 chrX 129142100 129142409 -37507887 + RLTR15 LTR ERVK 26 359 0 1 1570 21 36 0 0 chrX 129142504 129142532 -37507764 + AT_rich Low_complexity Low_complexity 1 28 0 1 1570 7904 132 10 146 chrX 129142609 129143108 -37507188 + L1_Mur1 LINE L1 4275 4726 -1160 1 1570 1107 101 0 0 chrX 129143108 129143256 -37507040 + B1_Mus1 SINE Alu 1 148 0 1 1570 7904 132 10 146 chrX 129143256 129144527 -37505769 + L1_Mur1 LINE L1 4727 5803 -83 1 1570 1210 57 13 0 chrX 129144520 129144678 -37505618 - L1_Mus1 LINE L1 -239 6328 6169 1 1570 1514 48 0 0 chrX 129144678 129144866 -37505430 + L1_Mus1 LINE L1 6379 6566 -1 1 1570 8146 96 25 3 chrX 129144880 129146079 -37504217 + Lx3_Mus LINE L1 5785 7009 0 1 1570 1711 192 12 12 chrX 129146103 129146446 -37503850 + L1_Mur2 LINE L1 5440 5782 -95 1 1570 3935 236 30 11 chrX 129146440 129147298 -37502998 + Lx5 LINE L1 6168 7042 -8 1 1570 2167 68 7 0 chrX 129147305 129147597 -37502699 + L1Md_F2 LINE L1 6289 6582 0 1 1570 389 246 18 0 chrX 129147628 129147738 -37502558 - L1_Rod LINE L1 -440 5407 5296 1 1570 554 304 66 75 chrX 129147747 129148095 -37502201 - L1M4c LINE L1 -5271 1113 769 1 1570 2253 174 160 124 chrX 129149051 129149253 -37501043 + Lx4B LINE L1 5154 5340 -546 1 1570 729 182 14 0 chrX 129149253 129149401 -37500895 + Lx3C LINE L1 6825 6974 -2 1 1570 2578 172 82 56 chrX 129149401 129150254 -37500042 + Lx4B LINE L1 5341 6239 -819 1 1570 23 0 0 0 chrX 129150619 129150642 -37499654 + AT_rich Low_complexity Low_complexity 1 23 0 1 1570 24 0 0 0 chrX 129152041 129152065 -37498231 + AT_rich Low_complexity Low_complexity 1 24 0 1 1570 585 42 0 0 chrX 129152069 129152141 -37498155 + (TC)n Simple_repeat Simple_repeat 1 72 0 1 1570 285 109 0 0 chrX 129152146 129152192 -37498104 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1570 266 161 193 18 chrX 129152245 129152302 -37497994 - B3A SINE B2 -123 75 9 1 1570 321 309 12 58 chrX 129154128 129154214 -37496082 - PB1D10 SINE Alu -33 84 3 1 1570 355 195 18 0 chrX 129154451 129154564 -37495732 + (TA)n Simple_repeat Simple_repeat 1 115 0 2 1570 953 266 87 4 chrX 129154610 129154885 -37495411 + Lx6 LINE L1 7155 7452 -8 2 1570 22 35 0 0 chrX 129155250 129155279 -37495017 + AT_rich Low_complexity Low_complexity 1 29 0 2 1570 2217 113 3 14 chrX 129155528 129155877 -37494419 - Lx LINE L1 -7 6647 6303 2 1570 1333 256 104 24 chrX 129156629 129157050 -37493246 - Lx6 LINE L1 -26 7434 6980 2 1570 766 304 17 2 chrX 129157053 129157293 -37493003 + Lx5 LINE L1 6236 6701 -995 2 1570 4200 149 31 30 chrX 129157609 129157963 -37492333 - RMER17D2 LTR ERVK 0 809 455 2 1570 441 0 0 0 chrX 129157963 129158012 -37492284 + (GA)n Simple_repeat Simple_repeat 1 49 0 2 1570 4200 149 31 30 chrX 129158012 129158461 -37491835 - RMER17D2 LTR ERVK -355 454 5 2 1570 213 0 81 0 chrX 129158614 129158651 -37491645 + (TTG)n Simple_repeat Simple_repeat 2 41 0 2 1570 1044 100 0 0 chrX 129158651 129158791 -37491505 - B1_Mus1 SINE Alu -8 140 1 2 1570 653 300 99 35 chrX 129158938 129158983 -37491313 - MTD LTR MaLR -14 405 343 2 1570 373 48 31 16 chrX 129158983 129159047 -37491249 + (TTTG)n Simple_repeat Simple_repeat 1 65 0 2 1570 653 300 99 35 chrX 129159047 129159130 -37491166 - MTD LTR MaLR -77 342 255 2 1570 1046 82 0 40 chrX 129159130 129159282 -37491014 + B1_Mus2 SINE Alu 1 146 -1 2 1570 867 37 0 0 chrX 129159282 129159389 -37490907 + (GAAA)n Simple_repeat Simple_repeat 2 108 0 2 1570 653 311 115 30 chrX 129159389 129159597 -37490699 - MTD LTR MaLR -162 259 25 2 1570 22 35 0 0 chrX 129160067 129160096 -37490200 + AT_rich Low_complexity Low_complexity 1 29 0 2 1570 7942 155 51 3 chrX 129161111 129163143 -37487153 - Lx LINE L1 0 6654 4526 2 1570 35010 32 1 13 chrX 129163151 129166830 -37483466 - L1VL1 LINE L1 -373 5510 1887 2 1570 4039 25 38 0 chrX 129166830 129167305 -37482991 - MT2_Mm LTR ERVL 0 493 1 2 1570 10738 56 1 34 chrX 129167305 129168059 -37482237 - L1VL1 LINE L1 -3997 1886 1132 2 1570 3391 127 16 18 chrX 129168055 129169053 -37481243 - L1VL4 LINE L1 -2147 1670 676 2 1570 333 263 56 21 chrX 129169075 129169264 -37481032 - L1VL4 LINE L1 -5795 724 385 2 1570 623 300 48 7 chrX 129169754 129170046 -37480250 - L1M2 LINE L1 -675 5625 5322 2 1570 294 413 38 0 chrX 129170309 129170544 -37479752 + Lx8 LINE L1 6522 6765 -708 2 1570 25 0 0 0 chrX 129170698 129170723 -37479573 + AT_rich Low_complexity Low_complexity 1 25 0 2 1570 234 311 11 22 chrX 129171003 129171095 -37479201 - BC1_Mm scRNA scRNA -48 104 14 2 1570 243 0 0 0 chrX 129171152 129171179 -37479117 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 1570 23 33 0 0 chrX 129171203 129171233 -37479063 + AT_rich Low_complexity Low_complexity 1 30 0 2 1570 4573 107 15 5 chrX 129171233 129171900 -37478396 - Lx3_Mus LINE L1 0 7009 6336 2 1570 5315 120 20 19 chrX 129171900 129173049 -37477247 + Lx3_Mus LINE L1 5043 6194 -815 2 1570 1266 192 11 63 chrX 129173070 129173354 -37476942 + Lx4B LINE L1 6784 7052 -6 2 1570 300 176 58 12 chrX 129173353 129173439 -37476857 + Lx4B LINE L1 6965 7054 -4 2 1570 950 145 0 13 chrX 129173457 129173611 -37476685 + Lx3_Mus LINE L1 6178 6329 -680 2 1570 549 44 0 0 chrX 129173750 129173818 -37476478 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 1570 2619 180 7 1 chrX 129173925 129174556 -37475740 - Lx3_Mus LINE L1 -925 6133 5492 2 1570 431 173 0 0 chrX 129174559 129174634 -37475662 - Lx3_Mus LINE L1 -515 5362 5288 2 1570 4024 194 53 12 chrX 129174631 129175405 -37474891 - Lx3_Mus LINE L1 -3019 2858 2068 2 1570 468 0 0 0 chrX 129175405 129175457 -37474839 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 1570 4024 217 145 12 chrX 129175457 129176305 -37473991 - Lx3_Mus LINE L1 -3803 2077 885 2 1570 464 257 91 0 chrX 129176416 129176603 -37473693 - L1MCa LINE L1 -4289 2219 2016 2 1570 502 255 55 10 chrX 129176849 129177051 -37473245 + Lx9 LINE L1 7306 7516 -128 2 1570 216 200 0 0 chrX 129177051 129177111 -37473185 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 1570 21 36 0 0 chrX 129177231 129177259 -37473037 + AT_rich Low_complexity Low_complexity 1 28 0 2 1570 447 35 0 0 chrX 129177394 129177451 -37472845 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1570 306 0 0 0 chrX 129177451 129177484 -37472812 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 1570 2810 190 24 31 chrX 129177567 129178202 -37472094 + L1_Mur3 LINE L1 4043 4672 -1208 2 1570 1512 231 92 0 chrX 129178347 129178771 -37471525 - Lx9 LINE L1 -2 7642 7180 2 1570 634 147 16 0 chrX 129179168 129179297 -37470999 + CT-rich Low_complexity Low_complexity 3 133 0 2 1570 225 0 0 0 chrX 129179793 129179818 -37470478 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2 1570 30 27 0 0 chrX 129180025 129180062 -37470234 + AT_rich Low_complexity Low_complexity 1 37 0 2 1570 565 270 62 53 chrX 129180249 129180605 -37469691 + RLTR10D LTR ERVK 1 359 0 2 1570 21 0 0 0 chrX 129180879 129180900 -37469396 + AT_rich Low_complexity Low_complexity 1 21 0 2 1570 441 0 0 0 chrX 129181245 129181294 -37469002 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1570 243 0 0 0 chrX 129181531 129181558 -37468738 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1570 649 323 5 0 chrX 129181571 129181791 -37468505 + Lx6 LINE L1 218 438 -7290 2 1570 4768 196 18 22 chrX 129181785 129182282 -37468014 + Lx6 LINE L1 4225 4708 -1172 2 1570 688 240 168 20 chrX 129182282 129182478 -37467818 - URR1B DNA MER1_type 0 225 1 2 1570 4768 196 18 22 chrX 129182478 129183026 -37467270 + Lx6 LINE L1 4709 5266 -614 2 1570 2763 74 0 11 chrX 129183033 129183403 -37466893 + L1Md_F2 LINE L1 6199 6564 -18 2 1570 38460 46 1 13 chrX 129183403 129189597 -37460699 - L1Md_A LINE L1 -1 6581 466 2 1570 440 164 0 0 chrX 129189613 129189680 -37460616 - L1Md_A LINE L1 -6287 329 263 2 1570 2069 228 26 91 chrX 129189713 129189897 -37460399 + Lx6 LINE L1 5281 5419 -461 2 1570 3574 149 51 13 chrX 129189897 129190522 -37459774 - Lx3B LINE L1 -4 6969 6321 2 1570 2069 235 41 65 chrX 129190522 129191190 -37459106 + Lx6 LINE L1 5420 6117 -1343 2 1570 1685 238 6 3 chrX 129191186 129191544 -37458752 + Lx6 LINE L1 6301 6659 -801 2 1570 1709 266 84 8 chrX 129191570 129191771 -37458525 + Lx6 LINE L1 6911 7117 -343 2 1570 570 29 0 0 chrX 129191771 129191839 -37458457 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 1570 1709 266 84 8 chrX 129191839 129192138 -37458158 + Lx6 LINE L1 7118 7448 -12 2 1570 644 36 12 0 chrX 129192141 129192224 -37458072 + (TAGA)n Simple_repeat Simple_repeat 4 87 0 2 1570 28 29 0 0 chrX 129192908 129192943 -37457353 + AT_rich Low_complexity Low_complexity 1 35 0 2 1570 441 225 114 17 chrX 129193001 129193177 -37457119 - Lx9 LINE L1 -20 7624 7432 2 1570 344 228 33 0 chrX 129193187 129193279 -37457017 - Lx9 LINE L1 -164 7480 7386 2 1570 943 290 118 18 chrX 129194176 129194776 -37455520 - L1ME1 LINE L1 -189 5990 5331 2 1570 558 0 0 0 chrX 129195057 129195119 -37455177 + (TA)n Simple_repeat Simple_repeat 1 62 0 2 1570 1366 288 119 26 chrX 129195319 129195943 -37454353 + Lx8 LINE L1 6792 7473 0 2 1570 953 325 99 62 chrX 129195974 129196392 -37453904 - Lx8 LINE L1 -743 6730 6269 2 1570 231 88 0 0 chrX 129196392 129196426 -37453870 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 2 1570 953 325 99 62 chrX 129196426 129196967 -37453329 - Lx8 LINE L1 -1205 6268 5736 2 1570 13272 200 193 38 chrX 129197123 129199023 -37451273 - L1_Mur2 LINE L1 -49 5828 3257 2 1570 6854 68 3 21 chrX 129199023 129199943 -37450353 + L1Md_F2 LINE L1 5675 6578 -4 2 1570 13272 200 193 38 chrX 129199943 129200032 -37450264 - L1_Mur2 LINE L1 -2621 3256 3240 2 1570 423 0 0 0 chrX 129200032 129200079 -37450217 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1570 13272 200 193 38 chrX 129200079 129201889 -37448407 - L1_Mur2 LINE L1 -2638 3239 1424 2 1570 281 26 26 0 chrX 129201889 129201927 -37448369 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 1570 1014 94 0 7 chrX 129201927 129202066 -37448230 - B1_Mm SINE Alu -8 139 2 2 1570 13272 200 193 38 chrX 129202066 129202270 -37448026 - L1_Mur2 LINE L1 -4454 1423 1204 2 1570 423 38 0 0 chrX 129202270 129202323 -37447973 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1570 4841 138 29 1 chrX 129202323 129202960 -37447336 - L1VL4 LINE L1 -5455 847 189 2 1570 231 256 128 115 chrX 129202991 129203049 -37447247 - Lx9 LINE L1 0 7644 7600 2 1570 1125 157 9 37 chrX 129203049 129203267 -37447029 - L1_Mus3 LINE L1 -1 6637 6426 2 1570 231 256 128 115 chrX 129203267 129203442 -37446854 - Lx9 LINE L1 -45 7599 7408 2 1570 21 100 0 0 chrX 129203900 129203970 -37446326 + AT_rich Low_complexity Low_complexity 1 70 0 2 1570 817 299 19 45 chrX 129204213 129204591 -37445705 + ORR1D2 LTR MaLR 3 370 0 2 1570 207 171 0 0 chrX 129205014 129205049 -37445247 + CT-rich Low_complexity Low_complexity 2 36 0 2 1570 417 277 26 78 chrX 129205050 129205242 -37445054 - Lx2B LINE L1 -14 6986 6805 2 1570 6423 52 0 5 chrX 129205615 129206423 -37443873 - L1Md_F3 LINE L1 0 6584 5781 2 1570 2711 57 0 0 chrX 129206423 129206756 -37443540 + L1Md_F3 LINE L1 5443 5775 -108 2 1570 288 0 0 0 chrX 129207751 129207783 -37442513 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1570 3197 61 0 6 chrX 129207802 129208292 -37442004 - L1Md_F3 LINE L1 -650 5934 5454 2 1570 185 0 40 0 chrX 129208296 129208321 -37441975 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 1570 1168 132 0 29 chrX 129208359 129208569 -37441727 - L1Md_F2 LINE L1 -12 6570 6367 2 1570 805 239 93 0 chrX 129208569 129208774 -37441522 + Lx6 LINE L1 6830 7053 -407 2 1570 21 36 0 0 chrX 129209887 129209915 -37440381 + AT_rich Low_complexity Low_complexity 1 28 0 2 1570 24 32 0 0 chrX 129209938 129209969 -37440327 + AT_rich Low_complexity Low_complexity 1 31 0 2 1570 387 73 0 0 chrX 129210376 129210431 -37439865 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 1570 252 0 0 0 chrX 129210509 129210537 -37439759 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 1570 25 51 0 0 chrX 129211014 129211053 -37439243 + AT_rich Low_complexity Low_complexity 1 39 0 2 1570 333 0 0 0 chrX 129212681 129212718 -37437578 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 1570 209 33 33 0 chrX 129212852 129212882 -37437414 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1570 641 54 3 0 chrX 129212882 129212972 -37437324 - B1_Mus2 SINE Alu -11 138 47 2 1570 228 272 34 90 chrX 129212906 129212995 -37437301 - MT2B2 LTR ERVL -320 264 181 2 1570 252 86 0 0 chrX 129213156 129213191 -37437105 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 1570 279 0 0 0 chrX 129213191 129213221 -37437075 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1570 376 295 204 31 chrX 129213235 129213588 -37436708 + Lx9 LINE L1 6357 6770 -874 2 1570 227 273 195 0 chrX 129213600 129213677 -37436619 + Lx9 LINE L1 6849 6940 -704 2 1570 4094 190 70 23 chrX 129213775 129214286 -37436010 - RMER17B LTR ERVK -15 943 425 2 1570 2290 67 0 22 chrX 129214286 129214606 -37435690 + L1Md_F2 LINE L1 6269 6581 -1 2 1570 4094 190 70 23 chrX 129214606 129214995 -37435301 - RMER17B LTR ERVK -534 424 1 2 1570 4606 250 50 40 chrX 129214996 129216247 -37434049 - Lx7 LINE L1 -57 7639 6373 2 1570 252 0 0 0 chrX 129216247 129216275 -37434021 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 1570 4606 250 50 40 chrX 129216275 129216350 -37433946 - Lx7 LINE L1 -1324 6372 6300 2 1570 854 311 13 9 chrX 129216363 129216590 -37433706 + 7SK RNA RNA 20 247 -84 2 1570 1116 282 101 25 chrX 129216590 129217077 -37433219 + Lx9 LINE L1 6935 7458 -186 2 1570 276 312 108 33 chrX 129217343 129217555 -37432741 + MLT1C LTR MaLR 1 228 -239 2 1570 1760 260 25 34 chrX 129217583 129218057 -37432239 - ORR1D-int LTR MaLR -13 1357 888 2 1570 9142 172 198 17 chrX 129218057 129220371 -37429925 + L1_Mm LINE L1 1806 4539 -1344 2 1570 356 333 52 17 chrX 129220529 129220645 -37429651 - ORR1D2 LTR MaLR -250 120 1 2 1570 3811 146 25 0 chrX 129220815 129221445 -37428851 + Lx3C LINE L1 6324 6969 -7 3 1570 7242 87 3 7 chrX 129221755 129222988 -37427308 - L1Md_F2 LINE L1 0 6582 5357 3 1570 236 266 13 0 chrX 129223000 129223079 -37427217 - L1ME3B LINE L1 -290 5950 5871 3 1570 2089 198 39 37 chrX 129223882 129224343 -37425953 - Lx5 LINE L1 -798 6252 5791 3 1570 2232 70 0 0 chrX 129224339 129224624 -37425672 - L1Md_F2 LINE L1 -376 6206 5922 3 1570 2692 62 0 17 chrX 129224624 129224986 -37425310 + L1Md_F2 LINE L1 6216 6571 -11 3 1570 17145 212 52 24 chrX 129224986 129226671 -37423625 - Lx5 LINE L1 -82 5795 4122 3 1570 315 85 0 0 chrX 129226671 129226718 -37423578 + (TTG)n Simple_repeat Simple_repeat 2 48 0 3 1570 17145 212 52 24 chrX 129226718 129226856 -37423440 - Lx5 LINE L1 -1756 4121 3955 3 1570 240 59 0 0 chrX 129226856 129226890 -37423406 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 1570 17145 212 52 24 chrX 129226890 129228722 -37421574 - Lx5 LINE L1 -1923 3954 2067 3 1570 456 77 0 0 chrX 129228722 129228787 -37421509 + (TAG)n Simple_repeat Simple_repeat 3 67 0 3 1570 17145 203 49 15 chrX 129228787 129229770 -37420526 - Lx5 LINE L1 -3811 2066 949 3 1570 1199 320 42 7 chrX 129229766 129230219 -37420077 - Lx7 LINE L1 -400 7296 6828 3 1570 24 32 0 0 chrX 129230371 129230402 -37419894 + AT_rich Low_complexity Low_complexity 1 31 0 3 1570 23 33 0 0 chrX 129230703 129230733 -37419563 + AT_rich Low_complexity Low_complexity 1 30 0 3 1570 429 20 0 0 chrX 129231182 129231232 -37419064 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1570 21 36 0 0 chrX 129231508 129231536 -37418760 + AT_rich Low_complexity Low_complexity 1 28 0 3 1570 1602 248 26 9 chrX 129231726 129232076 -37418220 - Lx5 LINE L1 -3 7047 6692 3 1570 3837 251 69 23 chrX 129232067 129233026 -37417270 + Lx5 LINE L1 6045 7047 -3 3 1570 222 208 38 0 chrX 129233239 129233292 -37417004 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 1570 286 103 0 0 chrX 129233615 129233654 -37416642 + U2 snRNA snRNA 1 39 -149 3 1570 8890 108 13 17 chrX 129233660 129235815 -37414481 + Lx3A LINE L1 4824 6965 -16 3 1570 518 338 19 19 chrX 129236091 129236305 -37413991 + ID_B1 SINE B4 3 216 -8 3 1570 790 330 136 17 chrX 129236378 129236902 -37413394 - Lx8 LINE L1 -4 7469 6884 3 196 877 211 81 29 chrX 129236927 129237137 -37413159 - URR1A DNA MER1_type -5 221 1 3 1571 782 345 68 53 chrX 129237148 129237624 -37412672 - L1_Rod LINE L1 -2905 2975 2479 3 1571 1132 158 0 5 chrX 129237624 129237808 -37412488 + B2_Mm2 SINE B2 1 183 -12 3 1571 1045 320 72 57 chrX 129237808 129239096 -37411200 - L1_Rod LINE L1 -3346 2501 1211 3 1571 413 308 80 40 chrX 129239970 129240244 -37410052 + Lx8 LINE L1 7181 7465 -8 3 1571 405 276 103 0 chrX 129240373 129240576 -37409720 + Lx9 LINE L1 7387 7610 -34 3 1571 435 266 0 0 chrX 129241930 129242024 -37408272 + RSINE1 SINE B4 9 102 -63 3 1571 414 57 0 0 chrX 129242081 129242134 -37408162 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 1571 21 0 0 0 chrX 129242134 129242155 -37408141 + AT_rich Low_complexity Low_complexity 1 21 0 3 1571 223 217 22 0 chrX 129242155 129242201 -37408095 + B1_Mur4 SINE Alu 99 145 -5 3 1571 945 49 0 0 chrX 129243038 129243161 -37407135 + (CA)n Simple_repeat Simple_repeat 2 124 0 3 1571 38 22 0 0 chrX 129243993 129244038 -37406258 + AT_rich Low_complexity Low_complexity 1 45 0 3 1571 341 359 19 13 chrX 129244139 129244294 -37406002 - MER57E1 LTR ERV1 -211 161 6 3 1571 276 315 42 65 chrX 129244410 129244624 -37405672 + L1MB5 LINE L1 5957 6165 -9 3 1571 15321 82 5 8 chrX 129245574 129248432 -37401864 - L1Md_F2 LINE L1 0 6582 3733 3 1571 1023 84 28 7 chrX 129248541 129248684 -37401612 + B1_Mm SINE Alu 2 147 0 3 1571 1734 319 98 21 chrX 129248755 129249481 -37400815 + Lx8 LINE L1 6592 7373 -100 3 1571 2177 187 2 0 chrX 129249645 129250047 -37400249 + L1_Mur2 LINE L1 3860 4262 -1615 3 1571 25 31 0 0 chrX 129250386 129250418 -37399878 + AT_rich Low_complexity Low_complexity 1 32 0 3 1571 41 48 0 0 chrX 129250583 129250645 -37399651 + AT_rich Low_complexity Low_complexity 1 62 0 3 1571 4614 215 63 10 chrX 129250779 129251792 -37398504 + Lx5 LINE L1 5979 7045 -5 3 1571 382 295 63 40 chrX 129251842 129252191 -37398105 - L1ME2 LINE L1 -179 5985 5628 3 1571 1104 89 0 0 chrX 129252497 129252677 -37397619 + (TC)n Simple_repeat Simple_repeat 1 180 0 3 1571 581 298 95 40 chrX 129252711 129252963 -37397333 + MLT2B3 LTR ERVL 252 517 -37 3 1571 449 345 39 16 chrX 129253460 129253769 -37396527 + L1MEc LINE L1 496 811 -5589 3 1571 423 0 0 0 chrX 129254071 129254118 -37396178 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 3 1571 4577 138 37 33 chrX 129254128 129254233 -37396063 - Lx2 LINE L1 -5 6992 6885 3 1571 183 80 0 0 chrX 129254233 129254258 -37396038 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 3 1571 4577 138 37 33 chrX 129254258 129254941 -37395355 - Lx2 LINE L1 -113 6884 6202 3 1571 515 303 62 40 chrX 129254996 129255223 -37395073 - MTE-int LTR MaLR -37 1543 1312 3 1571 266 344 10 67 chrX 129255396 129255589 -37394707 - Lx9 LINE L1 -155 7489 7308 3 1571 1704 231 27 36 chrX 129255601 129256014 -37394282 + MTC LTR MaLR 5 413 -8 3 1571 13479 123 19 22 chrX 129256456 129258091 -37392205 + Lx3A LINE L1 3 2089 -3797 3 1571 1125 76 7 0 chrX 129258091 129258236 -37392060 + B1_Mm SINE Alu 1 146 -1 3 1571 13479 107 13 35 chrX 129258236 129259612 -37390684 + Lx3A LINE L1 2090 3412 -2474 3 1571 8337 124 55 8 chrX 129259603 129261723 -37388573 + Lx3A LINE L1 4769 6979 -2 3 1571 378 0 0 0 chrX 129261725 129261767 -37388529 + (TAA)n Simple_repeat Simple_repeat 2 43 0 3 1571 991 377 60 80 chrX 129261780 129262810 -37387486 - MTE-int LTR MaLR -568 1012 3 3 1571 400 357 77 14 chrX 129263182 129263700 -37386596 + L1ME1 LINE L1 5313 5863 -316 3 1571 24 53 0 0 chrX 129263712 129263750 -37386546 + AT_rich Low_complexity Low_complexity 1 38 0 3 1571 297 379 17 8 chrX 129263999 129264116 -37386180 + B4 SINE B4 2 119 -173 3 1571 231 283 108 32 chrX 129264184 129264341 -37385955 - RLTR22_Mur LTR ERVK -381 1467 1299 3 1571 467 94 0 0 chrX 129264797 129264861 -37385435 + PB1D9 SINE Alu 1 64 -56 3 1571 559 62 0 0 chrX 129264957 129265038 -37385258 - L1Md_F2 LINE L1 0 6582 6502 3 1571 4086 67 0 0 chrX 129265040 129265581 -37384715 + L1_Mm LINE L1 2013 2553 -3330 3 1571 26 30 0 0 chrX 129265587 129265620 -37384676 + AT_rich Low_complexity Low_complexity 1 33 0 3 1571 1308 55 86 16 chrX 129265753 129265939 -37384357 + L1Md_F3 LINE L1 6372 6570 -14 3 1571 860 311 117 76 chrX 129265959 129266471 -37383825 - MT2A LTR ERVL 0 533 1 3 1571 303 279 62 72 chrX 129266475 129266561 -37383735 + L1M4 LINE L1 5036 5118 -1028 3 1571 2006 129 29 0 chrX 129266561 129266870 -37383426 + Lx3A LINE L1 6657 6974 -7 3 1571 303 278 76 101 chrX 129266870 129267341 -37382955 + L1M4 LINE L1 5119 5585 -595 3 1571 24 53 0 0 chrX 129267590 129267628 -37382668 + AT_rich Low_complexity Low_complexity 1 38 0 3 1571 899 319 6 52 chrX 129267712 129267743 -37382553 - MT2B LTR ERVL 0 601 571 3 1571 213 39 0 0 chrX 129267743 129267769 -37382527 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 1571 899 305 32 44 chrX 129267769 129268101 -37382195 - MT2B LTR ERVL -31 570 193 3 1571 991 258 116 7 chrX 129268116 129268401 -37381895 + Lx2B LINE L1 6654 6969 -31 3 1571 423 0 0 0 chrX 129268402 129268449 -37381847 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 3 1571 620 234 0 8 chrX 129268449 129268574 -37381722 - MT2B LTR ERVL -409 124 1 3 1571 315 354 57 14 chrX 129268732 129269084 -37381212 + L1MB7 LINE L1 5655 6021 -163 3 1571 2673 101 10 19 chrX 129269279 129269692 -37380604 + Lx2 LINE L1 6588 6996 -1 3 1571 310 290 37 0 chrX 129270087 129270200 -37380096 + Lx7 LINE L1 6771 6899 -797 3 1571 288 0 0 0 chrX 129270482 129270514 -37379782 + (GA)n Simple_repeat Simple_repeat 1 32 0 3 1571 482 225 46 0 chrX 129270722 129270873 -37379423 + Lx9 LINE L1 7486 7643 -1 3 1571 539 335 29 14 chrX 129270898 129271107 -37379189 + B3 SINE B2 1 212 -4 3 1571 11947 69 1 3 chrX 129272014 129273589 -37376707 + L1Md_F2 LINE L1 4016 5586 -297 3 1571 7923 53 1 3 chrX 129273589 129274574 -37375722 + L1Md_F2 LINE L1 5587 6569 -13 3 1571 905 281 136 3 chrX 129275477 129275809 -37374487 + MTE2b LTR MaLR 4 379 0 3 1571 25 65 0 0 chrX 129276821 129276867 -37373429 + AT_rich Low_complexity Low_complexity 1 46 0 3 1571 859 245 173 55 chrX 129276868 129277200 -37373096 - MT2A LTR ERVL -71 462 99 3 1571 6083 110 26 25 chrX 129277221 129278189 -37372107 - Lx3_Mus LINE L1 -5 7004 6036 3 1571 253 195 241 25 chrX 129278196 129278275 -37372021 - MT2A LTR ERVL -437 96 1 3 1571 1914 173 3 78 chrX 129279238 129279621 -37370675 - ORR1B1 LTR MaLR 0 394 41 3 1571 34661 38 3 9 chrX 129279740 129284562 -37365734 + L1Md_T LINE L1 233 5025 -858 3 1571 4383 12 0 12 chrX 129284562 129285061 -37365235 - MT2_Mm LTR ERVL 0 493 1 3 1571 34661 29 1 1 chrX 129285061 129285624 -37364672 + L1Md_T LINE L1 5026 5584 -299 3 1571 8158 40 7 0 chrX 129285626 129286612 -37363684 + L1Md_T LINE L1 5587 6579 -3 3 1571 389 382 7 46 chrX 129286880 129287031 -37363265 + B3A SINE B2 36 180 -18 3 1571 205 273 46 20 chrX 129287034 129287187 -37363109 + (CATATA)n Simple_repeat Simple_repeat 2 158 0 3 1571 918 42 0 0 chrX 129287191 129287310 -37362986 + (TAGA)n Simple_repeat Simple_repeat 3 121 0 3 1571 400 320 30 71 chrX 129287385 129287553 -37362743 - B3A SINE B2 0 198 38 3 1571 5942 109 21 16 chrX 129288583 129288893 -37361403 - L1_Mur1 LINE L1 -215 5671 5370 3 1571 1457 134 23 31 chrX 129288893 129289154 -37361142 - Lx LINE L1 0 6654 6396 3 1571 5942 109 21 16 chrX 129289154 129289808 -37360488 - L1_Mur1 LINE L1 -517 5369 4702 3 1571 6961 125 48 11 chrX 129289807 129291027 -37359269 + Lx3_Mus LINE L1 5735 7000 -9 3 1571 257 202 49 29 chrX 129291654 129291756 -37358540 + L1M2 LINE L1 2739 2842 -4007 3 1571 26 30 0 0 chrX 129291767 129291800 -37358496 + AT_rich Low_complexity Low_complexity 1 33 0 3 1571 313 273 53 0 chrX 129292221 129292353 -37357943 + L1M2 LINE L1 3318 3456 -3389 3 1571 707 318 0 0 chrX 129292393 129292607 -37357689 - B3 SINE B2 -2 214 1 3 1571 332 286 23 23 chrX 129292787 129292898 -37357398 - B3A SINE B2 -101 115 1 3 1571 6039 116 10 11 chrX 129292918 129293842 -37356454 + Lx3_Mus LINE L1 6078 7000 -9 3 1571 303 246 80 40 chrX 129293942 129294141 -37356155 - L1M1 LINE L1 -732 5571 5365 3 1571 1706 236 87 32 chrX 129294363 129294801 -37355495 - Lx5 LINE L1 -14 7036 6575 3 1571 776 152 0 0 chrX 129294801 129294926 -37355370 - Lx5 LINE L1 -663 6387 6263 3 1571 816 170 41 0 chrX 129294923 129295094 -37355202 + Lx5 LINE L1 5817 5994 -1056 3 1571 439 309 41 18 chrX 129295091 129295262 -37355034 - Lx8 LINE L1 -124 7349 7175 3 1571 246 81 0 0 chrX 129295330 129295367 -37354929 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1571 281 253 0 0 chrX 129295387 129295462 -37354834 - Lx8 LINE L1 -517 6956 6882 3 1571 7285 82 27 2 chrX 129295469 129296466 -37353830 + RLTR13D5 LTR ERVK 2 1023 0 4 1571 243 286 71 0 chrX 129296706 129296776 -37353520 - B4A SINE B4 -7 285 211 4 1571 1826 103 50 0 chrX 129296887 129297169 -37353127 - L1_Mus3 LINE L1 0 6638 6343 4 1571 636 261 36 13 chrX 129297686 129297911 -37352385 + L1MA5 LINE L1 5698 5927 -373 4 1571 1476 268 93 27 chrX 129298038 129298521 -37351775 + RLTR17 LTR ERVK 105 619 -73 4 1571 569 124 0 9 chrX 129298631 129298737 -37351559 + L1_Mus3 LINE L1 6533 6637 -1 4 1571 248 61 0 0 chrX 129298949 129298982 -37351314 - L1Md_A LINE L1 -6184 540 508 4 1571 1700 24 0 10 chrX 129298982 129299189 -37351107 + L1Md_F3 LINE L1 6363 6567 -17 4 1571 744 275 45 68 chrX 129299803 129300185 -37350111 + Lx8 LINE L1 6132 6504 -969 4 1571 1777 199 81 16 chrX 129300193 129300576 -37349720 - MTC LTR MaLR 0 421 14 4 1571 381 256 159 31 chrX 129300978 129301268 -37349028 - L1MC4a LINE L1 -2 7880 7554 4 1571 447 387 20 57 chrX 129301332 129301683 -37348613 - MLT1B LTR MaLR -52 338 1 4 1571 3253 244 26 15 chrX 129301734 129302549 -37347747 - Lx5 LINE L1 -7 7043 6220 4 1571 1703 178 53 21 chrX 129302632 129303006 -37347290 - LTRIS4 LTR ERV1 0 507 122 4 1571 22998 83 44 11 chrX 129303014 129307743 -37342553 - MuRRS4-int LTR ERV1 0 5063 180 4 1571 1753 142 50 44 chrX 129307958 129308342 -37341954 - LTRIS4 LTR ERV1 0 507 122 4 1571 546 219 91 6 chrX 129308423 129308588 -37341708 - L1_Mur2 LINE L1 -1107 4770 4592 4 1571 1474 190 68 8 chrX 129308578 129308929 -37341367 - Lx2 LINE L1 -605 6392 6021 4 1571 1223 102 20 15 chrX 129308945 129309144 -37341152 - Lx2 LINE L1 -1056 5941 5742 4 1571 1056 222 1 4 chrX 129309140 129309422 -37340874 - L1_Mur2 LINE L1 -6481 1247 900 4 1571 3413 153 113 2 chrX 129310000 129310610 -37339686 + RLTR33 LTR ERVK 1 678 0 4 1571 276 53 0 0 chrX 129310723 129310761 -37339535 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1571 828 79 0 0 chrX 129310761 129310886 -37339410 + (GA)n Simple_repeat Simple_repeat 1 126 0 4 1571 347 236 22 22 chrX 129310893 129310984 -37339312 - MTD LTR MaLR -14 405 315 4 1571 3629 200 55 42 chrX 129311014 129311753 -37338543 + RLTR25B LTR ERVK 1 772 -256 4 1571 351 0 0 0 chrX 129311753 129311792 -37338504 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 1571 288 0 0 0 chrX 129311792 129311823 -37338473 + (GA)n Simple_repeat Simple_repeat 2 33 0 4 1571 3629 128 51 28 chrX 129311823 129312000 -37338296 + RLTR25B LTR ERVK 773 1101 -2 4 1571 843 197 5 10 chrX 129312001 129312201 -37338095 + Lx5 LINE L1 5730 5928 -1122 4 1571 22 35 0 0 chrX 129312432 129312461 -37337835 + AT_rich Low_complexity Low_complexity 1 29 0 4 1571 183 163 19 93 chrX 129313000 129313054 -37337242 + MIRc SINE MIR 34 83 -185 4 1571 6311 161 26 21 chrX 129314362 129315542 -37334754 - Lx2 LINE L1 -2 6995 5810 4 1571 269 337 25 85 chrX 129315650 129315718 -37334578 - B2_Mm2 SINE B2 -5 190 2 4 1571 630 244 0 45 chrX 129315718 129315851 -37334445 - RSINE1 SINE B4 -36 129 3 4 1571 243 0 0 0 chrX 129317021 129317048 -37333248 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 1571 780 71 0 0 chrX 129317048 129317159 -37333137 + (TG)n Simple_repeat Simple_repeat 1 112 0 4 1571 221 326 36 24 chrX 129318388 129318498 -37331798 + MIRm SINE MIR 3 104 -172 4 1571 409 296 24 50 chrX 129318556 129318722 -37331574 + MLT2C2 LTR ERVL 386 555 -4 4 1571 5623 111 21 70 chrX 129318915 129319647 -37330649 - L1_Mm LINE L1 -1271 4612 3863 4 1571 192 40 0 0 chrX 129319647 129319672 -37330624 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1571 1041 54 39 0 chrX 129319674 129319803 -37330493 - B1_Mm SINE Alu -13 134 1 4 1571 5623 111 21 70 chrX 129319803 129320124 -37330172 - L1_Mm LINE L1 -2021 3862 3608 4 1571 654 254 23 34 chrX 129320444 129320619 -37329677 + Lx5 LINE L1 6168 6340 -710 4 1571 1370 273 68 11 chrX 129320650 129321094 -37329202 + Lx6 LINE L1 6966 7434 -26 4 1571 2008 131 52 6 chrX 129321260 129321605 -37328691 + Lx LINE L1 6294 6654 0 4 1571 186 347 46 46 chrX 129321699 129321829 -37328467 - MIRb SINE MIR -58 210 81 4 1571 180 111 0 0 chrX 129322023 129322050 -37328246 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1571 622 320 92 37 chrX 129322780 129323160 -37327136 + Lx8 LINE L1 7047 7447 -26 4 1571 492 377 10 25 chrX 129323894 129324090 -37326206 + B3A SINE B2 1 193 -5 4 1571 25 65 0 0 chrX 129324323 129324369 -37325927 + AT_rich Low_complexity Low_complexity 1 46 0 4 1571 270 0 0 0 chrX 129325226 129325256 -37325040 + (TC)n Simple_repeat Simple_repeat 1 30 0 4 1571 276 30 0 0 chrX 129325256 129325288 -37325008 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 1571 1721 302 77 27 chrX 129325366 129326245 -37324051 - Lx8 LINE L1 -34 7439 6517 4 1571 34377 53 3 16 chrX 129326264 129331653 -37318643 + L1Md_A LINE L1 268 5586 -297 4 1571 8393 31 2 0 chrX 129331654 129332645 -37317651 + L1Md_A LINE L1 5588 6580 -2 4 1571 344 335 107 17 chrX 129332669 129332958 -37317338 - Lx8 LINE L1 -987 6486 6172 4 1571 1963 268 76 24 chrX 129333032 129333895 -37316401 - Lx8 LINE L1 -1662 5982 5042 4 1571 468 0 0 0 chrX 129333895 129333947 -37316349 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1571 486 0 0 0 chrX 129333947 129334000 -37316296 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 1571 1963 257 53 1780 chrX 129334000 129334341 -37315955 - Lx8 LINE L1 -806 5041 4439 4 1571 301 381 34 45 chrX 129334358 129334534 -37315762 - B3A SINE B2 -8 190 17 4 1571 326 281 92 43 chrX 129334537 129334754 -37315542 - L1M2 LINE L1 -1673 4470 4244 4 1571 714 24 0 0 chrX 129334754 129334838 -37315458 + (TG)n Simple_repeat Simple_repeat 1 84 0 4 1571 435 19 0 0 chrX 129334838 129334889 -37315407 + (GA)n Simple_repeat Simple_repeat 1 52 0 4 1571 296 281 92 43 chrX 129334889 129334975 -37315321 - L1M2 LINE L1 -1897 4243 4149 4 1571 227 297 20 0 chrX 129334988 129335089 -37315207 - L1M2 LINE L1 -1792 4351 4249 4 1571 354 80 0 0 chrX 129335093 129335143 -37315153 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1571 435 19 0 0 chrX 129335143 129335194 -37315102 + (GA)n Simple_repeat Simple_repeat 1 52 0 4 1571 970 262 76 16 chrX 129335198 129335578 -37314718 - Lx8 LINE L1 -1719 4161 3759 4 1571 414 0 0 0 chrX 129335606 129335652 -37314644 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1571 883 336 68 24 chrX 129336179 129336657 -37313639 - Lx6 LINE L1 -66 7394 6520 4 1571 1403 277 67 28 chrX 129336688 129337265 -37313031 - Lx6 LINE L1 -684 6366 5743 4 1571 204 97 0 0 chrX 129337686 129337717 -37312579 + (ATG)n Simple_repeat Simple_repeat 2 32 0 4 1571 1711 75 29 0 chrX 129337751 129337990 -37312306 - Lx2B LINE L1 -7 6993 6748 4 1571 5202 171 1 13 chrX 129337992 129338326 -37311970 + Lx2B LINE L1 4960 5290 -587 4 1571 827 186 11 0 chrX 129338326 129338503 -37311793 + Lx2A1 LINE L1 6827 7005 -3 4 1571 7357 130 19 7 chrX 129338503 129339921 -37310375 + Lx2B LINE L1 5291 6727 -273 4 1571 331 316 30 0 chrX 129340040 129340208 -37310088 + L1MA4A LINE L1 5754 5926 -377 4 1571 185 132 26 0 chrX 129340222 129340260 -37310036 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1571 21 36 0 0 chrX 129340460 129340488 -37309808 + AT_rich Low_complexity Low_complexity 1 28 0 4 1571 263 296 30 10 chrX 129340572 129340671 -37309625 + MLT1D LTR MaLR 386 486 -19 4 1571 407 310 22 37 chrX 129340874 129341008 -37309288 + RSINE1 SINE B4 15 146 -19 4 1571 1976 150 11 3 chrX 129341085 129341433 -37308863 - Lx2 LINE L1 -1 6996 6646 4 1571 1180 61 0 0 chrX 129342002 129342149 -37308147 + B1_Mm SINE Alu 1 147 0 4 1571 206 81 27 0 chrX 129342151 129342188 -37308108 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 4 1571 7705 57 4 5 chrX 129342715 129343769 -37306527 - L1Md_F2 LINE L1 -11 6571 5519 4 1571 386 308 11 1 chrX 129343767 129343944 -37306352 - L1MA5 LINE L1 -468 5832 5653 4 1571 724 303 17 9 chrX 129343951 129344184 -37306112 - Lx7 LINE L1 -1371 6325 6091 4 1571 855 298 25 88 chrX 129344407 129344833 -37305463 - MTE2a LTR MaLR -14 405 1 4 1571 1752 161 14 0 chrX 129345699 129345990 -37304306 - ORR1A3 LTR MaLR 0 326 32 4 1571 422 102 0 14 chrX 129346418 129346488 -37303808 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 1571 25 0 0 0 chrX 129347613 129347638 -37302658 + AT_rich Low_complexity Low_complexity 1 25 0 4 1571 900 262 107 20 chrX 129347929 129348229 -37302067 - MTD LTR MaLR -92 327 2 4 1571 813 21 0 0 chrX 129348291 129348386 -37301910 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 4 1571 1038 80 0 28 chrX 129348386 129348527 -37301769 - B1_Mm SINE Alu -10 137 1 4 1571 234 0 0 0 chrX 129349176 129349202 -37301094 + (TC)n Simple_repeat Simple_repeat 2 27 0 4 1571 289 283 56 72 chrX 129349322 129349774 -37300522 + L1MCb LINE L1 929 1460 -5291 4 1571 458 211 0 22 chrX 129349984 129350120 -37300176 - Lx9 LINE L1 0 7644 7512 4 1571 2705 37 0 0 chrX 129350129 129350452 -37299844 + L1Md_F2 LINE L1 6253 6575 -7 4 1571 32 75 0 0 chrX 129350528 129350595 -37299701 + AT_rich Low_complexity Low_complexity 1 67 0 4 1571 1964 237 57 8 chrX 129350604 129351127 -37299169 - Lx9 LINE L1 -195 7449 6901 4 1571 612 59 20 0 chrX 129351731 129351833 -37298463 + L1Md_F3 LINE L1 6478 6581 -3 4 1571 896 355 36 18 chrX 129351996 129352549 -37297747 + ERVL-E-int LTR ERVL 2193 2755 -2912 4 1571 209 125 25 0 chrX 129352761 129352801 -37297495 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 1571 1250 63 0 22 chrX 129353267 129353446 -37296850 - L1Md_F2 LINE L1 -12 6570 6396 4 1571 3180 64 5 5 chrX 129353446 129353854 -37296442 + L1Md_F2 LINE L1 5950 6357 -225 4 1571 423 184 0 0 chrX 129353970 129354057 -37296239 + (CA)n Simple_repeat Simple_repeat 1 87 0 4 1571 479 221 0 0 chrX 129354077 129354163 -37296133 + B1_Mus1 SINE Alu 1 86 -62 4 1571 350 316 108 0 chrX 129354287 129354445 -37295851 + L1M5 LINE L1 5092 5266 -880 4 1571 495 33 0 0 chrX 129354572 129354633 -37295663 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 1571 201 108 0 0 chrX 129354633 129354669 -37295627 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 1571 294 228 0 37 chrX 129354765 129354847 -37295449 + (TCTG)n Simple_repeat Simple_repeat 2 80 0 4 1571 1806 319 84 42 chrX 129354872 129355398 -37294898 - Lx7 LINE L1 -389 7307 6733 4 1571 342 0 0 0 chrX 129355398 129355436 -37294860 + (TAA)n Simple_repeat Simple_repeat 3 40 0 5 1571 1806 319 84 42 chrX 129355436 129355849 -37294447 - Lx7 LINE L1 -964 6732 6329 4 1571 1149 215 73 11 chrX 129355870 129356143 -37294153 + MTD LTR MaLR 1 290 -129 5 1571 292 0 22 44 chrX 129356151 129356196 -37294100 + (CAT)n Simple_repeat Simple_repeat 2 45 0 5 1571 3576 121 68 12 chrX 129356201 129356772 -37293524 - Lx3B LINE L1 -5 6968 6366 5 1571 560 83 0 0 chrX 129356772 129356844 -37293452 + Lx3C LINE L1 6283 6354 -622 5 1571 311 235 122 0 chrX 129356844 129356942 -37293354 + MTD LTR MaLR 295 404 -15 5 1571 306 292 53 70 chrX 129356956 129357199 -37293097 - Lx8 LINE L1 -1189 6284 6046 5 1571 23 0 0 0 chrX 129358962 129358985 -37291311 + AT_rich Low_complexity Low_complexity 1 23 0 5 1571 207 69 0 0 chrX 129360377 129360406 -37289890 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1571 241 275 12 0 chrX 129360633 129360713 -37289583 - Lx6 LINE L1 0 7460 7380 5 1571 2411 226 116 5 chrX 129360731 129361367 -37288929 + Lx2B LINE L1 6294 7000 0 5 1571 685 299 24 0 chrX 129361361 129361572 -37288724 - Lx6 LINE L1 -138 7322 7107 5 1571 25 51 0 0 chrX 129362107 129362146 -37288150 + AT_rich Low_complexity Low_complexity 1 39 0 5 1571 17381 68 7 1 chrX 129362398 129364691 -37285605 + L1Md_F2 LINE L1 3280 5586 -297 5 1571 7533 69 1 9 chrX 129364692 129365680 -37284616 + L1Md_F2 LINE L1 5588 6567 -15 5 1571 981 102 13 33 chrX 129365703 129365855 -37284441 + B1_Mur4 SINE Alu 1 149 -1 5 1571 441 0 0 0 chrX 129365876 129365925 -37284371 + (GAAAA)n Simple_repeat Simple_repeat 3 51 0 5 1571 2451 71 6 0 chrX 129365943 129366267 -37284029 - IAPEY2_LTR LTR ERVK 0 357 32 5 1571 3388 118 24 28 chrX 129366277 129367004 -37283292 - IAPEY3-int LTR ERVK 0 7581 6908 5 1571 684 111 10 0 chrX 129367006 129367105 -37283191 - IAPEY3-int LTR ERVK -4395 3285 3186 5 1571 1559 57 5 0 chrX 129367097 129367290 -37283006 - IAPEY3-int LTR ERVK -2635 5045 4852 5 1571 4097 67 6 2 chrX 129367283 129367808 -37282488 - IAPEY3-int LTR ERVK -4991 2689 2163 5 196 686 282 62 26 chrX 129368047 129368353 -37281943 - L1_Rod LINE L1 -84 5763 5447 5 1572 243 344 122 20 chrX 129368438 129368684 -37281612 + L1M5 LINE L1 4784 5054 -1092 5 1572 714 323 80 33 chrX 129368780 129369258 -37281038 - L1_Rod LINE L1 -144 5703 5262 5 1572 656 165 54 16 chrX 129369322 129369451 -37280845 + RMER20B LTR ERVK 3 136 -491 5 1572 1615 147 93 7 chrX 129369453 129369754 -37280542 + IAPEY3_LTR LTR ERVK 1 327 -5 5 1572 1607 239 24 121 chrX 129369759 129370303 -37279993 + RMER20B LTR ERVK 137 627 0 5 1572 364 310 79 9 chrX 129370349 129370463 -37279833 - B3A SINE B2 -76 122 1 5 1572 1395 269 6 3 chrX 129370815 129371128 -37279168 - RMER15 LTR ERVL -43 532 219 5 1572 329 255 9 28 chrX 129371849 129371958 -37278338 + L1M5 LINE L1 4595 4701 -1445 5 1572 1979 158 12 6 chrX 129372466 129372791 -37277505 + ORR1A2 LTR MaLR 1 327 0 5 1572 568 42 0 0 chrX 129372791 129372862 -37277434 + L1_Mm LINE L1 3662 3732 -2151 5 1572 3721 141 62 162 chrX 129372862 129373810 -37276486 + ORR1A2-int LTR MaLR 940 1792 0 5 1572 1918 155 6 19 chrX 129373810 129374133 -37276163 + ORR1A2 LTR MaLR 1 319 -8 5 1572 549 0 0 0 chrX 129374300 129374361 -37275935 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 1572 422 349 83 0 chrX 129375039 129375268 -37275028 - Lx8 LINE L1 -237 7236 6989 5 1572 673 311 34 83 chrX 129375360 129375787 -37274509 + MTEa LTR MaLR 15 375 -4 5 1572 811 343 124 50 chrX 129375863 129376538 -37273758 + MTE-int LTR MaLR 83 807 -773 5 1572 1055 67 8 0 chrX 129376555 129376689 -37273607 + B1_Mm SINE Alu 1 135 -12 5 1572 333 47 0 0 chrX 129376689 129376732 -37273564 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 5 1572 1716 165 37 40 chrX 129376948 129377270 -37273026 + ORR1A4 LTR MaLR 1 321 -8 5 1572 24 0 0 0 chrX 129377458 129377482 -37272814 + AT_rich Low_complexity Low_complexity 1 24 0 5 1572 488 138 21 0 chrX 129377489 129377583 -37272713 + Lx3C LINE L1 6871 6966 -10 5 1572 29 28 0 0 chrX 129377594 129377630 -37272666 + AT_rich Low_complexity Low_complexity 1 36 0 5 1572 2907 130 35 6 chrX 129379636 129380117 -37270179 + Lx2B LINE L1 6502 6996 -4 5 1572 2521 192 124 25 chrX 129380119 129380707 -37269589 + Lx2 LINE L1 6352 6997 0 5 1572 637 372 73 56 chrX 129381278 129381745 -37268551 - MLT1E2 LTR MaLR -5 622 148 5 1572 921 37 0 0 chrX 129382016 129382124 -37268172 + L1Md_T LINE L1 5479 5586 -297 5 1572 7897 56 6 0 chrX 129382124 129383142 -37267154 + L1Md_T LINE L1 5587 6582 0 5 1572 218 376 49 10 chrX 129383273 129383375 -37266921 + MIRc SINE MIR 109 214 -54 5 1572 565 269 15 8 chrX 129385021 129385152 -37265144 - B1_Mur2 SINE Alu -1 148 17 5 1572 211 204 0 0 chrX 129385231 129385280 -37265016 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 5 1572 1386 191 162 47 chrX 129385441 129385843 -37264453 - RMER16 LTR ERVK -85 448 1 5 1572 395 336 47 4 chrX 129386164 129386397 -37263899 - Lx8 LINE L1 -1553 5920 5678 5 1572 7869 127 60 10 chrX 129386658 129388206 -37262090 - Lx3B LINE L1 -3 6970 5359 5 1572 3191 105 0 0 chrX 129388224 129388670 -37261626 - L1_Mus1 LINE L1 0 6567 6122 5 1572 7803 122 51 107 chrX 129388670 129389744 -37260552 - Lx3B LINE L1 -528 5358 4381 5 1572 213 146 0 0 chrX 129389747 129389795 -37260501 + (T)n Simple_repeat Simple_repeat 1 48 0 5 1572 1155 75 0 0 chrX 129389796 129389942 -37260354 - B1_Mus1 SINE Alu -1 147 2 5 1572 23 0 0 0 chrX 129390587 129390610 -37259686 + AT_rich Low_complexity Low_complexity 1 23 0 5 1572 815 158 68 0 chrX 129390899 129391032 -37259264 + B1_Mus1 SINE Alu 1 142 -6 5 1572 399 220 0 0 chrX 129391057 129391148 -37259148 + (TATATG)n Simple_repeat Simple_repeat 3 93 0 5 1572 196 245 0 39 chrX 129392874 129392925 -37257371 - MIR SINE MIR 0 262 214 5 1572 384 40 0 0 chrX 129395197 129395247 -37255049 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 1572 584 333 38 10 chrX 129395717 129395760 -37254536 - B3A SINE B2 -1 215 170 5 1572 648 38 0 0 chrX 129395760 129395839 -37254457 + (TG)n Simple_repeat Simple_repeat 1 79 0 5 1572 584 341 23 6 chrX 129395839 129396004 -37254292 - B3A SINE B2 -29 169 1 5 1572 417 20 0 0 chrX 129396200 129396250 -37254046 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1572 28 29 0 0 chrX 129396675 129396710 -37253586 + AT_rich Low_complexity Low_complexity 1 35 0 5 1572 567 66 0 0 chrX 129396807 129396883 -37253413 + (TA)n Simple_repeat Simple_repeat 2 77 0 5 1572 300 53 0 0 chrX 129398125 129398163 -37252133 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1572 25 0 0 0 chrX 129398851 129398876 -37251420 + AT_rich Low_complexity Low_complexity 1 25 0 5 1572 5500 59 18 0 chrX 129398999 129399715 -37250581 - L1Md_F3 LINE L1 -1 6583 5855 5 1572 5911 57 0 0 chrX 129399716 129400455 -37249841 + L1Md_F3 LINE L1 5124 5862 -21 5 1572 407 322 73 76 chrX 129402255 129402571 -37247725 - Lx8 LINE L1 -18 7455 7141 5 1572 237 196 0 0 chrX 129404502 129404553 -37245743 + (CTA)n Simple_repeat Simple_repeat 3 53 0 5 1572 24 0 0 0 chrX 129404662 129404686 -37245610 + AT_rich Low_complexity Low_complexity 1 24 0 5 1572 3110 208 58 42 chrX 129405801 129406578 -37243718 + L1Md_F LINE L1 80 868 -5651 5 1572 1549 28 0 0 chrX 129406573 129406754 -37243542 - L1Md_F2 LINE L1 -773 5809 5629 5 1572 218 191 0 0 chrX 129407712 129407754 -37242542 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1572 291 136 0 0 chrX 129407755 129407814 -37242482 + (GA)n Simple_repeat Simple_repeat 2 60 0 5 1572 306 87 0 0 chrX 129408042 129408088 -37242208 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1572 588 40 0 0 chrX 129408088 129408162 -37242134 + (GA)n Simple_repeat Simple_repeat 1 75 0 5 1572 454 309 50 22 chrX 129408485 129408664 -37241632 + L2 LINE L2 1607 1790 -1629 5 1572 405 0 0 0 chrX 129408833 129408878 -37241418 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 1572 310 295 54 8 chrX 129409379 129409509 -37240787 - Lx7 LINE L1 -1 7695 7560 5 1572 975 274 79 27 chrX 129409537 129409905 -37240391 - Lx7 LINE L1 -242 7454 7068 5 1572 2654 34 61 6 chrX 129410444 129410772 -37239524 + ORR1A0 LTR MaLR 1 346 0 5 1572 244 169 119 0 chrX 129410772 129410831 -37239465 + Lx5 LINE L1 6983 7048 -2 5 1572 583 0 52 0 chrX 129411482 129411559 -37238737 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 5 1572 182 381 78 18 chrX 129411684 129411903 -37238393 - L3 LINE CR1 -11 4478 4247 5 1572 400 292 21 0 chrX 129412254 129412350 -37237946 - B3A SINE B2 -100 98 1 5 1572 28 29 0 0 chrX 129412430 129412465 -37237831 + AT_rich Low_complexity Low_complexity 1 35 0 5 1572 373 291 107 0 chrX 129412737 129412840 -37237456 - B1F SINE Alu -7 142 29 5 1572 841 257 90 12 chrX 129412949 129413292 -37237004 + Lx9 LINE L1 7267 7636 -8 5 1572 294 302 150 7 chrX 129414013 129414149 -37236147 - RMER15 LTR ERVL -5 570 415 5 1572 1735 171 127 63 chrX 129414149 129414523 -37235773 - RMER4A LTR ERVK 0 466 60 5 1572 946 93 7 52 chrX 129414523 129414696 -37235600 + L1_Mus1 LINE L1 6427 6567 0 5 1572 1735 171 127 63 chrX 129414696 129414746 -37235550 - RMER4A LTR ERVK -407 59 15 5 1572 459 0 0 0 chrX 129416299 129416350 -37233946 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 1572 219 114 0 0 chrX 129416350 129416384 -37233912 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1572 1050 284 32 0 chrX 129416958 129417236 -37233060 - Lx6 LINE L1 -709 6751 6465 5 1572 2721 251 53 8 chrX 129417238 129417900 -37232396 + Lx6 LINE L1 6761 7452 -8 5 1572 511 307 0 55 chrX 129417973 129418118 -37232178 - ID_B1 SINE B4 0 224 88 5 1572 629 290 130 12 chrX 129418268 129418572 -37231724 - MTD LTR MaLR -60 361 1 5 1572 587 298 0 0 chrX 129418658 129418816 -37231480 - Lx8 LINE L1 -315 7158 7001 5 1572 1592 248 128 46 chrX 129418826 129419139 -37231157 - Lx6 LINE L1 -13 7447 7118 5 1572 402 115 0 0 chrX 129419139 129419200 -37231096 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1572 1592 248 128 46 chrX 129419200 129419403 -37230893 - Lx6 LINE L1 -343 7117 6889 5 1572 411 133 0 0 chrX 129419386 129419446 -37230850 - Lx6 LINE L1 -937 6523 6464 5 1572 569 198 9 0 chrX 129419451 129419557 -37230739 + Lx6 LINE L1 6452 6558 -902 5 1572 644 197 0 0 chrX 129419558 129419675 -37230621 - Lx6 LINE L1 -1052 6408 6292 5 1572 389 308 24 32 chrX 129419695 129419819 -37230477 + RSINE1 SINE B4 12 134 -31 5 1572 21 0 0 0 chrX 129419849 129419870 -37230426 + AT_rich Low_complexity Low_complexity 1 21 0 5 1572 1853 255 13 18 chrX 129419924 129420324 -37229972 - Lx2B LINE L1 0 6997 6540 5 1572 531 0 0 0 chrX 129420324 129420383 -37229913 + (TAAAA)n Simple_repeat Simple_repeat 2 60 0 5 1572 1853 252 2 17 chrX 129420383 129420502 -37229794 - Lx2B LINE L1 -461 6539 6426 5 1572 28 0 0 0 chrX 129420970 129420998 -37229298 + AT_rich Low_complexity Low_complexity 1 28 0 5 1572 29 28 0 0 chrX 129421262 129421298 -37228998 + AT_rich Low_complexity Low_complexity 1 36 0 5 1572 341 162 0 14 chrX 129421559 129421628 -37228668 + CT-rich Low_complexity Low_complexity 2 69 0 6 1572 226 319 0 14 chrX 129421679 129421752 -37228544 - RMER1C Other Other -175 1167 1096 6 1572 27 49 0 0 chrX 129424644 129424685 -37225611 + AT_rich Low_complexity Low_complexity 1 41 0 6 1572 348 373 108 36 chrX 129425042 129425549 -37224747 - L2a LINE L2 -289 3137 2595 6 1572 270 353 8 25 chrX 129425627 129425749 -37224547 - L2a LINE L2 -1005 2414 2295 6 1572 2886 127 5 0 chrX 129426324 129426878 -37223418 - Lx2A1 LINE L1 -1011 5997 5444 6 1572 5260 165 13 28 chrX 129426886 129427806 -37222490 + Lx2A1 LINE L1 6034 6946 -62 6 1572 6364 66 4 1 chrX 129427806 129428612 -37221684 - RLTR13C2 LTR ERVK 0 808 1 6 1572 5260 165 13 28 chrX 129428612 129428664 -37221632 + Lx2A1 LINE L1 6947 6992 -16 6 1572 6773 60 5 7 chrX 129428656 129429565 -37220731 + L1Md_F2 LINE L1 5699 6582 0 6 1572 28 29 0 0 chrX 129430268 129430303 -37219993 + AT_rich Low_complexity Low_complexity 1 35 0 6 1572 22 0 0 0 chrX 129430875 129430897 -37219399 + AT_rich Low_complexity Low_complexity 1 22 0 6 1572 2518 83 11 0 chrX 129431182 129431532 -37218764 + L1_Mus3 LINE L1 6285 6638 0 6 1572 183 100 0 0 chrX 129431561 129431591 -37218705 + (A)n Simple_repeat Simple_repeat 1 30 0 6 1572 362 299 82 58 chrX 129433164 129433370 -37216926 - RMER15 LTR ERVL -13 562 352 6 1572 768 327 81 12 chrX 129433491 129433813 -37216483 - Lx8 LINE L1 -745 6728 6385 6 1572 299 306 0 0 chrX 129434570 129434642 -37215654 + BC1_Mm scRNA scRNA 13 84 -68 6 1572 2356 314 93 48 chrX 129434935 129435659 -37214637 - RMER15-int LTR ERVL -2775 2224 1477 6 1572 2104 136 13 73 chrX 129435659 129436041 -37214255 - RLTR10D LTR ERVK 0 359 1 6 1572 2356 314 93 48 chrX 129436041 129436539 -37213757 - RMER15-int LTR ERVL -3523 1476 947 6 1572 4849 72 1 29 chrX 129436559 129437217 -37213079 - L1_Mus2 LINE L1 -3 6563 5924 6 1572 708 21 96 0 chrX 129437217 129437311 -37212985 + L1_Mus2 LINE L1 5847 5949 -617 6 1572 1165 362 53 73 chrX 129437311 129437609 -37212687 - RMER15-int LTR ERVL -4040 959 665 6 1572 414 0 0 0 chrX 129437609 129437655 -37212641 + (TTTTG)n Simple_repeat Simple_repeat 3 48 0 6 1572 901 100 8 8 chrX 129437659 129437790 -37212506 - B1_Mus2 SINE Alu -16 131 1 6 1572 1165 362 53 73 chrX 129437790 129438132 -37212164 - RMER15-int LTR ERVL -4335 664 343 6 1572 1700 234 2 69 chrX 129438132 129438581 -37211715 - MTC LTR MaLR -2 419 1 6 1572 1165 362 53 73 chrX 129438581 129438911 -37211385 - RMER15-int LTR ERVL -4657 342 6 6 1572 454 312 65 28 chrX 129438922 129439136 -37211160 - RMER15 LTR ERVL -17 558 337 6 1572 23 97 0 0 chrX 129439471 129439543 -37210753 + AT_rich Low_complexity Low_complexity 1 72 0 6 1572 5099 59 14 5 chrX 129439634 129440295 -37210001 - L1Md_F2 LINE L1 -2 6580 5914 6 1572 725 298 70 52 chrX 129440482 129441024 -37209272 - L1MA6 LINE L1 -27 6273 5722 6 1572 197 222 22 0 chrX 129441051 129441096 -37209200 + MIR SINE MIR 84 129 -133 6 1572 1395 274 45 28 chrX 129441146 129441608 -37208688 - Lx8 LINE L1 -261 7212 6743 6 1572 8020 54 2 0 chrX 129441610 129443240 -37207056 - L1Md_F2 LINE L1 -1 6581 4948 6 1572 950 325 24 9 chrX 129443236 129443568 -37206728 - Lx8 LINE L1 -720 6753 6417 6 1572 857 75 0 0 chrX 129443760 129443866 -37206430 - L1Md_F2 LINE L1 -242 5641 5536 6 1572 7060 69 2 17 chrX 129443866 129444819 -37205477 + L1Md_F2 LINE L1 5640 6578 -4 6 1572 908 318 100 30 chrX 129448387 129448922 -37201374 - Lx8 LINE L1 -5 7468 6897 6 1572 1767 156 7 7 chrX 129448922 129449225 -37201071 - Lx3A LINE L1 -6 6975 6673 6 1572 688 358 23 41 chrX 129449225 129449256 -37201040 - Lx8 LINE L1 -800 6896 6866 6 1572 561 309 75 53 chrX 129449318 129449636 -37200660 - Lx8 LINE L1 -985 6488 6164 6 1572 25 51 0 0 chrX 129450766 129450805 -37199491 + AT_rich Low_complexity Low_complexity 1 39 0 6 1572 699 273 191 24 chrX 129451963 129452266 -37198030 + ORR1D2 LTR MaLR 5 357 -13 6 1572 7958 54 3 1 chrX 129452360 129453413 -37196883 - L1Md_F2 LINE L1 -12 6570 5516 6 1572 3702 58 8 0 chrX 129453415 129453895 -37196401 + L1Md_F2 LINE L1 5017 5500 -383 6 1572 435 53 0 39 chrX 129454317 129454395 -37195901 + (TG)n Simple_repeat Simple_repeat 2 76 0 6 1572 346 357 69 35 chrX 129454398 129454543 -37195753 - RSINE1 SINE B4 -12 153 4 6 1572 1924 183 13 54 chrX 129454653 129455045 -37195251 - ORR1C1 LTR MaLR -2 376 1 6 1572 279 0 0 0 chrX 129455582 129455613 -37194683 + (TA)n Simple_repeat Simple_repeat 2 32 0 6 1572 209 349 0 0 chrX 129457818 129457881 -37192415 + (TATG)n Simple_repeat Simple_repeat 4 66 0 6 1572 3305 38 5 2 chrX 129458974 129459369 -37190927 + MTA_Mm LTR MaLR 1 396 0 6 1572 800 221 0 0 chrX 129460153 129460302 -37189994 + B1_Mur4 SINE Alu 2 150 0 6 1572 6683 200 17 35 chrX 129460498 129460866 -37189430 - Lx2B LINE L1 0 7000 6630 6 1572 5348 79 0 6 chrX 129460866 129461577 -37188719 - L1Md_F2 LINE L1 -12 6570 5864 6 1572 6683 200 17 35 chrX 129461577 129462434 -37187862 - Lx2B LINE L1 -371 6629 5786 6 1572 1123 75 0 20 chrX 129462434 129462446 -37187850 - B1_Mm SINE Alu 0 147 138 6 1572 207 0 0 0 chrX 129462446 129462469 -37187827 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1572 1123 75 0 20 chrX 129462469 129462606 -37187690 - B1_Mm SINE Alu -10 137 1 6 1572 6683 183 4 128 chrX 129462606 129463135 -37187161 - Lx2B LINE L1 -98 5788 5291 6 1572 5483 157 49 15 chrX 129463135 129464160 -37186136 - Lx3B LINE L1 -6 6967 5908 6 1572 1415 176 23 50 chrX 129464153 129464452 -37185844 - Lx3B LINE L1 -1 6972 6682 6 1572 5348 183 4 128 chrX 129464452 129465174 -37185122 - Lx2B LINE L1 -596 5290 4693 6 1572 5949 173 9 138 chrX 129465173 129467137 -37183159 + L1_Mur3 LINE L1 2994 4693 -1184 6 1572 217 151 18 36 chrX 129468028 129468083 -37182213 + T-rich Low_complexity Low_complexity 2 55 0 6 1572 4650 128 37 8 chrX 129468090 129468823 -37181473 - Lx3B LINE L1 -4 6969 6216 6 1572 699 276 51 10 chrX 129470078 129470371 -37179925 - Lx9 LINE L1 -106 7538 7234 6 1572 2056 208 102 8 chrX 129470400 129470908 -37179388 - Lx2B LINE L1 -3838 2039 1484 6 1572 243 61 0 0 chrX 129470919 129470952 -37179344 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 6 1572 3427 122 28 11 chrX 129470952 129471483 -37178813 - Lx3A LINE L1 -13 6968 6429 6 1572 1012 86 0 184 chrX 129471484 129471712 -37178584 + L1_Mur1 LINE L1 4604 4789 -1097 6 1572 1610 180 36 56 chrX 129471711 129472342 -37177954 - Lx2B LINE L1 -4377 1500 868 6 1572 920 233 57 13 chrX 129472575 129472805 -37177491 + Lx5 LINE L1 6673 6912 -138 6 1572 26 0 0 0 chrX 129472946 129472972 -37177324 + AT_rich Low_complexity Low_complexity 1 26 0 6 1572 1734 288 92 43 chrX 129472974 129473015 -37177281 - Lx9 LINE L1 -460 7184 7125 6 1572 342 0 0 0 chrX 129473015 129473053 -37177243 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1572 1734 288 92 43 chrX 129473053 129473166 -37177130 - Lx9 LINE L1 -520 7124 6995 6 1572 2634 89 0 73 chrX 129473166 129473590 -37176706 + L1Md_F2 LINE L1 6178 6570 -12 6 1572 1734 288 92 43 chrX 129473590 129474193 -37176103 - Lx9 LINE L1 -650 6994 6390 6 1572 228 189 19 0 chrX 129474242 129474295 -37176001 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 6 1572 4376 108 14 0 chrX 129474433 129475064 -37175232 - L1_Mus3 LINE L1 -7 6631 5992 6 1572 7922 121 3 31 chrX 129475072 129477173 -37173123 - L1Md_F3 LINE L1 -14 6570 4548 6 1572 6710 47 0 2 chrX 129477174 129478025 -37172271 + L1Md_F3 LINE L1 3688 4536 -1347 6 1572 7185 123 11 8 chrX 129478011 129479287 -37171009 - L1_Mus3 LINE L1 -546 6020 4745 6 1572 1160 198 87 0 chrX 129479351 129479593 -37170703 - Lx5 LINE L1 -32 7018 6756 6 1572 201 290 6 37 chrX 129480845 129480928 -37169368 - MIRm SINE MIR -72 196 119 6 1572 387 0 0 0 chrX 129481471 129481514 -37168782 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1572 440 312 14 51 chrX 129481598 129481995 -37168301 + L1_Mur3 LINE L1 1027 1418 -4462 6 1572 590 320 90 8 chrX 129481993 129482261 -37168035 + Lx7 LINE L1 6159 6448 -1248 6 1572 766 272 157 25 chrX 129482316 129482640 -37167656 + Lx7 LINE L1 6535 6901 -795 6 1572 255 290 56 28 chrX 129482768 129482910 -37167386 - L1MA4 LINE L1 -339 5961 5816 6 1572 470 258 57 53 chrX 129482978 129483187 -37167109 - L1MA4 LINE L1 -462 5838 5629 6 1572 5204 90 1 10 chrX 129483240 129483966 -37166330 - L1Md_F2 LINE L1 -11 6571 5852 6 1572 12685 75 3 1 chrX 129483966 129485648 -37164648 + L1Md_F2 LINE L1 4198 5883 0 6 1572 2707 247 43 23 chrX 129485651 129486620 -37163676 - L1MA4 LINE L1 -722 5575 4579 6 1572 342 0 0 0 chrX 129487448 129487486 -37162810 + (A)n Simple_repeat Simple_repeat 1 38 0 6 1572 480 18 0 0 chrX 129487736 129487793 -37162503 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 1572 3866 40 0 12 chrX 129488033 129488519 -37161777 + L1Md_F2 LINE L1 6102 6581 -1 6 1572 430 362 28 31 chrX 129488616 129488907 -37161389 + L1M3e LINE L1 37 326 -6704 6 1572 7297 43 6 0 chrX 129488939 129490099 -37160197 - L1Md_F2 LINE L1 -432 6150 4986 6 1572 778 110 0 0 chrX 129490097 129490206 -37160090 + L1Md_F2 LINE L1 4856 4964 -919 6 1572 685 295 15 4 chrX 129490284 129490549 -37159747 + L1M2 LINE L1 5345 5612 -679 6 1572 311 349 118 15 chrX 129490560 129490755 -37159541 + ID_B1 SINE B4 10 224 0 6 1572 348 133 0 0 chrX 129490765 129490825 -37159471 + (GGA)n Simple_repeat Simple_repeat 2 61 0 6 1572 228 301 0 12 chrX 129490828 129490912 -37159384 + GA-rich Low_complexity Low_complexity 2 84 0 6 1572 272 123 0 50 chrX 129490936 129490996 -37159300 + GA-rich Low_complexity Low_complexity 3 59 0 6 1572 186 43 0 0 chrX 129491193 129491216 -37159080 + (T)n Simple_repeat Simple_repeat 1 23 0 6 1572 5466 18 0 0 chrX 129491218 129491844 -37158452 - L1Md_A LINE L1 0 6582 5957 6 1572 352 300 98 15 chrX 129491844 129491976 -37158320 + Lx8 LINE L1 7123 7265 -208 6 1572 25 31 0 0 chrX 129493215 129493247 -37157049 + AT_rich Low_complexity Low_complexity 1 32 0 6 1572 2769 204 6 6 chrX 129493445 129493964 -37156332 + RLTR11A2 LTR ERVK 9 527 0 6 1572 395 281 43 16 chrX 129494212 129494336 -37155960 + MIRc SINE MIR 42 163 -45 6 1572 360 0 0 0 chrX 129494341 129494381 -37155915 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1572 315 0 0 0 chrX 129494381 129494415 -37155881 + (TA)n Simple_repeat Simple_repeat 1 35 0 6 1572 333 0 0 0 chrX 129494415 129494451 -37155845 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 1572 450 149 0 53 chrX 129494452 129494565 -37155731 + (CAGAGA)n Simple_repeat Simple_repeat 6 112 0 6 1572 195 380 44 0 chrX 129494798 129494911 -37155385 + MIRb SINE MIR 65 182 -86 6 1572 1019 66 0 0 chrX 129494914 129495086 -37155210 + L1_Mus1 LINE L1 6431 6567 0 6 1572 219 200 0 20 chrX 129495275 129495326 -37154970 + A-rich Low_complexity Low_complexity 1 50 0 6 1572 3789 37 0 2 chrX 129495353 129495812 -37154484 + L1Md_F2 LINE L1 5129 5586 -297 6 1572 7020 79 19 21 chrX 129495813 129496799 -37153497 + L1Md_F2 LINE L1 5588 6571 -11 6 1572 465 269 5 97 chrX 129496800 129496985 -37153311 - Lx7 LINE L1 -231 7465 7298 6 1572 23 0 0 0 chrX 129497007 129497030 -37153266 + AT_rich Low_complexity Low_complexity 1 23 0 6 1572 857 261 142 38 chrX 129497295 129497640 -37152656 - Lx7 LINE L1 -391 7305 6925 6 1572 2169 84 22 9 chrX 129497640 129497963 -37152333 - RMER17A LTR ERVK -424 327 1 6 1572 367 181 0 3 chrX 129497963 129498041 -37152255 + Lx5 LINE L1 5849 5924 -1085 6 1573 3735 40 4 9 chrX 129499275 129499773 -37150523 + L1Md_F2 LINE L1 6105 6582 0 6 1573 1507 109 0 0 chrX 129499779 129500000 -37150296 + L1_Mm LINE L1 4958 5178 -705 6 1573 4071 154 1 5 chrX 129500000 129500665 -37149631 + L1_Mm LINE L1 5179 5841 -42 1 1573 1497 91 16 44 chrX 129500663 129500915 -37149381 + L1_Mus3 LINE L1 6394 6638 0 2 1573 4088 177 54 9 chrX 129500924 129501716 -37148580 + Lx LINE L1 5827 6654 0 3 1573 1167 130 38 0 chrX 129501885 129502070 -37148226 - B2_Mm2 SINE B2 -2 193 2 4 1573 22 0 0 0 chrX 129502072 129502094 -37148202 + AT_rich Low_complexity Low_complexity 1 22 0 5 1573 986 295 22 34 chrX 129503340 129503675 -37146621 + ORR1D1 LTR MaLR 37 378 0 6 1573 21 36 0 0 chrX 129504065 129504093 -37146203 + AT_rich Low_complexity Low_complexity 1 28 0 7 1573 24 0 0 0 chrX 129504680 129504704 -37145592 + AT_rich Low_complexity Low_complexity 1 24 0 8 1573 253 352 88 0 chrX 129505184 129505309 -37144987 - B1F SINE Alu -9 140 5 9 1573 2300 81 59 0 chrX 129505389 129505712 -37144584 + L1_Mus1 LINE L1 6224 6565 -2 1 1573 6057 148 12 9 chrX 129505721 129506706 -37143590 + Lx LINE L1 5660 6647 -7 1 1573 261 0 0 0 chrX 129506707 129506736 -37143560 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1 1573 574 306 47 9 chrX 129507009 129507220 -37143076 - MIR SINE MIR -42 220 2 1 1573 924 9 0 0 chrX 129508132 129508237 -37142059 + (TC)n Simple_repeat Simple_repeat 2 106 0 1 1573 261 0 0 0 chrX 129508237 129508265 -37142031 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1573 21 36 0 0 chrX 129508510 129508538 -37141758 + AT_rich Low_complexity Low_complexity 1 28 0 1 1573 6245 231 33 15 chrX 129508539 129510175 -37140121 - Lx5 LINE L1 -9 7041 5362 1 1573 4892 82 3 8 chrX 129510175 129510883 -37139413 - L1_Mus3 LINE L1 0 6638 5967 1 1573 3139 223 12 24 chrX 129510883 129511116 -37139180 - Lx5 LINE L1 -516 5361 5127 1 1573 309 287 28 0 chrX 129513033 129513141 -37137155 + CT-rich Low_complexity Low_complexity 3 113 0 1 1573 210 91 0 0 chrX 129513995 129514028 -37136268 + (CAA)n Simple_repeat Simple_repeat 1 33 0 2 1573 2366 191 18 79 chrX 129514814 129515360 -37134936 - RMER1A Other Other -18 1012 500 2 1573 3504 233 45 59 chrX 129515366 129516279 -37134017 - RMER13B LTR ERVK -1 907 8 2 1573 824 246 12 18 chrX 129516292 129516462 -37133834 - RMER1A Other Other -530 500 332 2 1573 7243 127 51 29 chrX 129518413 129519641 -37130655 + Lx3B LINE L1 5713 6968 -5 2 1573 910 80 7 7 chrX 129519684 129519822 -37130474 + (GAA)n Simple_repeat Simple_repeat 1 138 0 2 1573 5941 166 14 1 chrX 129519825 129520883 -37129413 - L1_Mur2 LINE L1 -129 5748 4677 2 1573 4683 198 50 7 chrX 129520880 129521884 -37128412 + Lx4B LINE L1 5991 7037 -21 2 1573 206 32 32 0 chrX 129521884 129521915 -37128381 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 2 1573 248 319 65 11 chrX 129523623 129523715 -37126581 + MIR SINE MIR 12 108 -154 2 1573 306 198 32 21 chrX 129524303 129524396 -37125900 - L1MA5 LINE L1 0 6300 6207 2 1573 1378 265 114 35 chrX 129524530 129525364 -37124932 + RMER1B Other Other 36 1051 -15 3 1573 1431 299 103 35 chrX 129525758 129526748 -37123548 + Lx6 LINE L1 5895 7434 -26 3 1573 1070 108 0 0 chrX 129526818 129526966 -37123330 - B1_Mus1 SINE Alu 0 148 1 3 1573 33 43 0 0 chrX 129527314 129527361 -37122935 + AT_rich Low_complexity Low_complexity 1 47 0 3 1573 445 205 26 0 chrX 129529165 129529282 -37121014 - Lx9 LINE L1 -4 7640 7521 3 1573 21 71 0 0 chrX 129529297 129529339 -37120957 + AT_rich Low_complexity Low_complexity 1 42 0 3 1573 271 275 77 0 chrX 129529435 129529526 -37120770 - L1M3 LINE L1 -366 5817 5720 3 1573 389 283 45 30 chrX 129529579 129529845 -37120451 - L1M3 LINE L1 -651 5523 5245 3 1573 2261 246 39 13 chrX 129529841 129530380 -37119916 - Lx6 LINE L1 -782 6678 6126 3 1573 2182 272 92 20 chrX 129530381 129531034 -37119262 + Lx6 LINE L1 6677 7376 -84 3 1573 24 0 0 0 chrX 129531034 129531058 -37119238 + AT_rich Low_complexity Low_complexity 1 24 0 3 1573 262 276 0 0 chrX 129531083 129531141 -37119155 + (TAG)n Simple_repeat Simple_repeat 2 59 0 3 1573 407 337 31 53 chrX 129532383 129532688 -37117608 - HAL1 LINE L1 -417 2090 1793 4 1573 3392 30 2 0 chrX 129532688 129533083 -37117213 + MTA_Mm LTR MaLR 1 396 0 4 1573 407 337 31 53 chrX 129533083 129533097 -37117199 - HAL1 LINE L1 -715 1792 1779 4 1573 1008 342 53 33 chrX 129533171 129533276 -37117020 + Lx8 LINE L1 6175 6278 -1195 4 1573 279 0 0 0 chrX 129533276 129533307 -37116989 + (TTAG)n Simple_repeat Simple_repeat 3 33 0 4 1573 1008 342 53 33 chrX 129533307 129533354 -37116942 + Lx8 LINE L1 6279 6334 -1139 4 1573 486 33 0 0 chrX 129533354 129533414 -37116882 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 1573 1008 342 53 33 chrX 129533414 129533861 -37116435 + Lx8 LINE L1 6335 6786 -687 4 1573 621 0 0 0 chrX 129533885 129533954 -37116342 + (GA)n Simple_repeat Simple_repeat 2 70 0 4 1573 230 260 0 0 chrX 129534020 129534070 -37116226 + Lx7 LINE L1 7040 7089 -607 4 1573 923 189 6 6 chrX 129534294 129534475 -37115821 - B2_Mm2 SINE B2 -14 181 1 4 1573 28696 68 1 0 chrX 129534839 129539342 -37110954 - L1Md_F2 LINE L1 -12 6570 2064 4 1573 1818 65 4 0 chrX 129539329 129539561 -37110735 - L1Md_F2 LINE L1 -5714 902 670 4 1573 1251 215 0 0 chrX 129539553 129539790 -37110506 - L1Md_F2 LINE L1 -6282 334 98 4 1573 780 318 105 10 chrX 129540362 129540753 -37109543 - Lx8 LINE L1 -117 7356 6929 4 1573 1148 285 35 30 chrX 129541096 129541326 -37108970 - MTC-int LTR MaLR -644 614 387 5 1573 3431 66 0 0 chrX 129541326 129541767 -37108529 - L1Md_F2 LINE L1 -12 6570 6130 5 1573 1148 285 35 30 chrX 129541767 129541902 -37108394 - MTC-int LTR MaLR -872 386 247 5 1573 395 305 47 0 chrX 129541904 129542032 -37108264 - MTD LTR MaLR -218 201 68 5 1573 5025 164 27 1 chrX 129542043 129542905 -37107391 - Lx2 LINE L1 -2 6995 6112 5 1573 545 111 44 0 chrX 129542904 129542994 -37107302 + Lx LINE L1 6554 6647 -7 5 1573 6806 209 28 17 chrX 129543136 129544157 -37106139 - Lx5 LINE L1 -11 7039 6005 5 1573 3413 45 2 0 chrX 129544157 129544577 -37105719 - L1Md_T LINE L1 -1 6581 6161 5 1573 6806 202 42 13 chrX 129544577 129545321 -37104975 - Lx5 LINE L1 -1046 6004 5248 5 1573 419 52 17 0 chrX 129545321 129545379 -37104917 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 1573 4824 200 44 12 chrX 129545379 129545838 -37104458 - Lx5 LINE L1 -630 5247 4763 5 1573 2230 215 47 78 chrX 129545838 129546073 -37104223 + RMER19C LTR ERVK 67 275 -336 5 1573 293 0 27 0 chrX 129546073 129546110 -37104186 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 5 1573 2230 215 47 78 chrX 129546110 129546424 -37103872 + RMER19C LTR ERVK 276 599 -12 5 1573 528 259 31 6 chrX 129546440 129546472 -37103824 - Lx5 LINE L1 -1115 4762 4731 5 1573 236 0 91 0 chrX 129546472 129546516 -37103780 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 6 1573 528 259 31 6 chrX 129546516 129546642 -37103654 - Lx5 LINE L1 -1147 4730 4601 5 1573 1179 135 9 33 chrX 129546644 129546858 -37103438 - Lx2 LINE L1 0 6997 6789 6 1573 928 100 0 0 chrX 129546858 129546988 -37103308 + Lx2 LINE L1 6663 6792 -205 6 1573 23 33 0 0 chrX 129547190 129547220 -37103076 + AT_rich Low_complexity Low_complexity 1 30 0 6 1573 370 233 103 19 chrX 129547252 129547363 -37102933 + B1F SINE Alu 8 115 -5 6 1573 1328 297 55 49 chrX 129547928 129548456 -37101840 + MT2A LTR ERVL 1 531 -2 6 1573 22 70 0 0 chrX 129548555 129548598 -37101698 + AT_rich Low_complexity Low_complexity 1 43 0 6 1573 279 338 3 22 chrX 129548629 129548721 -37101575 - PB1D7 SINE Alu -8 112 21 6 1573 267 31 0 0 chrX 129549406 129549438 -37100858 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 1573 1099 96 0 0 chrX 129549766 129549912 -37100384 + B1_Mus2 SINE Alu 2 147 0 6 1573 306 50 0 0 chrX 129549912 129549952 -37100344 + (A)n Simple_repeat Simple_repeat 1 40 0 6 1573 276 380 30 0 chrX 129549977 129550077 -37100219 + PB1D7 SINE Alu 12 114 -6 7 1573 31 0 0 0 chrX 129550941 129550972 -37099324 + AT_rich Low_complexity Low_complexity 1 31 0 7 1573 247 372 75 35 chrX 129551043 129551290 -37099006 - MIR SINE MIR 0 262 17 7 1573 211 146 73 0 chrX 129551336 129551377 -37098919 + MIRc SINE MIR 225 268 0 7 1573 306 305 121 40 chrX 129551836 129551935 -37098361 + RSINE1 SINE B4 37 143 -22 7 1573 420 308 74 37 chrX 129552044 129552233 -37098063 - RMER17B LTR ERVK -9 899 704 7 1573 1810 245 19 108 chrX 129552207 129552758 -37097538 - RMER17B LTR ERVK -116 842 343 7 1573 2920 31 0 6 chrX 129552758 129553109 -37097187 + L1Md_F3 LINE L1 6221 6569 -15 7 1573 1810 234 14 128 chrX 129553109 129553495 -37096801 - RMER17B LTR ERVK -616 342 5 7 1573 498 103 0 0 chrX 129553743 129553821 -37096475 + (GA)n Simple_repeat Simple_repeat 1 78 0 7 1573 497 309 11 32 chrX 129553848 129554035 -37096261 + Lx9 LINE L1 6361 6543 -1101 7 1573 2161 276 56 29 chrX 129554057 129554830 -37095466 + Lx9 LINE L1 6697 7490 -154 7 1573 209 205 38 25 chrX 129555101 129555181 -37095115 + (TATATG)n Simple_repeat Simple_repeat 3 83 0 7 1573 1114 75 7 0 chrX 129555966 129556113 -37094183 - B1_Mus1 SINE Alu 0 148 1 8 1573 27 49 0 0 chrX 129556321 129556362 -37093934 + AT_rich Low_complexity Low_complexity 1 41 0 8 1573 25 31 0 0 chrX 129557225 129557257 -37093039 + AT_rich Low_complexity Low_complexity 1 32 0 8 1573 24 32 0 0 chrX 129557308 129557339 -37092957 + AT_rich Low_complexity Low_complexity 1 31 0 8 1573 741 262 34 10 chrX 129557359 129557563 -37092733 + B3 SINE B2 2 210 -6 8 1573 870 77 0 65 chrX 129557566 129557752 -37092544 + L1Md_F3 LINE L1 6426 6584 0 8 1573 393 372 120 0 chrX 129557881 129558206 -37092090 + Lx8 LINE L1 6981 7344 -129 8 1573 671 316 56 45 chrX 129558787 129559075 -37091221 + B4A SINE B4 2 292 0 8 1573 346 59 0 0 chrX 129559160 129559211 -37091085 - L1_Mus2 LINE L1 0 6566 6516 8 1573 244 367 23 0 chrX 129559218 129559346 -37090950 - L1MA5 LINE L1 -33 6267 6137 8 1573 4854 272 55 18 chrX 129559393 129559734 -37090562 - L1_Mm LINE L1 -780 5517 5138 9 1573 216 0 0 0 chrX 129559734 129559758 -37090538 + (TA)n Simple_repeat Simple_repeat 1 24 0 9 1573 4854 277 44 49 chrX 129559758 129560023 -37090273 - L1_Mm LINE L1 -1006 5137 4889 9 1573 1135 128 33 0 chrX 129560023 129560203 -37090093 + B2_Mm2 SINE B2 2 187 -8 9 1573 9573 140 18 10 chrX 129560203 129561990 -37088306 - L1_Mm LINE L1 -1255 4888 3110 9 1573 1184 306 88 32 chrX 129561989 129562611 -37087685 - Lx9 LINE L1 -126 7518 6862 9 1573 578 289 88 55 chrX 129562991 129563421 -37086875 + L1MEc LINE L1 2230 2731 -4356 9 1573 434 213 19 0 chrX 129563424 129563532 -37086764 + (TATG)n Simple_repeat Simple_repeat 1 110 0 9 1573 21 71 0 0 chrX 129563695 129563737 -37086559 + AT_rich Low_complexity Low_complexity 1 42 0 9 1573 276 30 0 0 chrX 129564108 129564141 -37086155 + (TTA)n Simple_repeat Simple_repeat 3 35 0 9 1573 490 262 0 0 chrX 129564176 129564298 -37085998 + Lx9 LINE L1 7301 7422 -222 9 1573 385 330 64 0 chrX 129564362 129564565 -37085731 + L1MEc LINE L1 2779 2994 -4014 9 1573 1592 30 5 5 chrX 129565563 129565763 -37084533 - L1Md_F3 LINE L1 -14 6570 6371 9 1573 1621 88 2 1 chrX 129565780 129566008 -37084288 - L1Md_F2 LINE L1 -469 5890 5629 1 1573 748 243 0 23 chrX 129566010 129566187 -37084109 - RMER19A LTR ERVK -562 175 3 1 1573 404 340 26 96 chrX 129566819 129567238 -37083058 + MLT1B LTR MaLR 1 390 0 1 1573 418 351 13 39 chrX 129567296 129567485 -37082811 + Lx8 LINE L1 7011 7194 -279 1 1573 1916 196 36 29 chrX 129567485 129567901 -37082395 - MTC LTR MaLR -2 419 1 1 1573 418 351 13 39 chrX 129567901 129567945 -37082351 + Lx8 LINE L1 7195 7238 -235 1 1573 435 324 96 44 chrX 129568318 129568567 -37081729 - ORR1E LTR MaLR 0 359 98 1 1573 410 327 72 15 chrX 129568643 129568978 -37081318 + L1M3 LINE L1 3820 4173 -1967 1 1573 4274 218 17 26 chrX 129569431 129570311 -37079985 + Lx5 LINE L1 6179 7050 0 1 1573 1654 71 0 13 chrX 129570757 129570985 -37079311 + L1Md_F3 LINE L1 6357 6581 -3 1 1573 24030 85 16 5 chrX 129571256 129575261 -37075035 + L1Md_F LINE L1 515 4564 -1319 1 1573 5212 102 9 4 chrX 129575273 129576027 -37074269 + L1Md_F2 LINE L1 5822 6579 -3 1 1573 442 335 106 30 chrX 129576099 129576724 -37073572 + L1M5 LINE L1 3952 4619 -1527 1 1573 237 163 0 44 chrX 129576802 129576892 -37073404 + A-rich Low_complexity Low_complexity 2 87 0 1 1573 587 248 14 14 chrX 129576904 129577043 -37073253 + L1M3a LINE L1 360 498 -5805 1 1573 269 393 61 6 chrX 129577060 129577224 -37073072 + L1M3a LINE L1 587 759 -5544 1 1573 1022 156 110 5 chrX 129577969 129578169 -37072127 - URR1A DNA MER1_type -1 225 5 1 1573 261 301 29 10 chrX 129578269 129578373 -37071923 - RMER15 LTR ERVL -36 539 434 1 1573 1919 119 0 7 chrX 129578534 129578830 -37071466 + ORR1A1 LTR MaLR 1 294 -52 1 1573 501 300 48 12 chrX 129578841 129579091 -37071205 + L1M3a LINE L1 1277 1535 -4778 1 1573 1370 212 127 25 chrX 129579331 129579693 -37070603 - MTB_Mm LTR MaLR -8 399 1 1 1573 359 340 142 9 chrX 129579819 129580030 -37070266 - Tigger2b DNA MER2_type -92 634 396 1 1573 829 61 0 0 chrX 129580191 129580305 -37069991 + L1_Mus1 LINE L1 6452 6565 -2 1 1573 532 88 0 0 chrX 129580308 129580388 -37069908 - L1Md_F2 LINE L1 -3 6579 6500 1 1573 25 0 0 0 chrX 129580389 129580414 -37069882 + AT_rich Low_complexity Low_complexity 1 25 0 1 1573 302 45 23 0 chrX 129580618 129580662 -37069634 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 1 1573 1884 328 37 40 chrX 129580701 129581381 -37068915 + Lx9 LINE L1 6402 7075 -569 1 1573 4189 111 11 87 chrX 129581381 129581828 -37068468 + RMER17A LTR ERVK 1 413 -338 1 1573 1011 17 0 0 chrX 129581828 129581945 -37068351 + (TTC)n Simple_repeat Simple_repeat 3 119 0 1 1573 4189 111 11 87 chrX 129581945 129582310 -37067986 + RMER17A LTR ERVK 414 751 0 1 1573 1884 328 37 40 chrX 129582310 129582607 -37067689 + Lx9 LINE L1 7076 7376 -268 1 1573 337 308 75 6 chrX 129582717 129582890 -37067406 + L1M3a LINE L1 1483 1667 -4717 1 1573 323 362 97 26 chrX 129583145 129583454 -37066842 + MLT1A0 LTR MaLR 10 340 -25 1 1573 22 0 0 0 chrX 129583471 129583493 -37066803 + AT_rich Low_complexity Low_complexity 1 22 0 1 1573 1016 251 42 121 chrX 129583741 129584677 -37065619 + Lx8 LINE L1 5137 5977 -1496 1 1573 1432 208 14 26 chrX 129584693 129585038 -37065258 - L1_Mur2 LINE L1 -3893 1984 1644 1 1573 3923 180 33 19 chrX 129585037 129585643 -37064653 + Lx5 LINE L1 5105 5732 -145 1 1573 3886 122 38 0 chrX 129585643 129586251 -37064045 + Lx LINE L1 6024 6654 0 1 1573 3923 169 65 25 chrX 129586251 129586675 -37063621 + Lx5 LINE L1 5733 6179 -871 1 1573 672 214 23 11 chrX 129586699 129586874 -37063422 + Lx4B LINE L1 6865 7041 -17 1 1573 3512 203 34 12 chrX 129586905 129587766 -37062530 - L1_Mur3 LINE L1 -726 5154 4275 1 1573 1819 51 0 8 chrX 129587878 129588115 -37062181 + L1Md_F2 LINE L1 6336 6570 -12 1 1573 302 286 45 28 chrX 129588431 129588607 -37061689 + L1M2 LINE L1 5447 5625 -675 1 1573 4892 76 1 3 chrX 129588638 129589284 -37061012 - L1_Mus2 LINE L1 0 6566 5922 1 1573 2438 109 0 53 chrX 129589284 129589663 -37060633 - RLTR10D LTR ERVK 0 359 1 1 1573 850 39 0 0 chrX 129589663 129589765 -37060531 - L1_Mus2 LINE L1 -711 5927 5826 1 1573 256 270 64 21 chrX 129589780 129589920 -37060376 + L1M2 LINE L1 5641 5786 -403 1 1573 2083 163 167 2 chrX 129589944 129590394 -37059902 + ORR1A1-int LTR MaLR 13 536 -1256 1 1573 1185 164 106 0 chrX 129590394 129590620 -37059676 + Lx LINE L1 6396 6645 -9 1 1573 473 333 0 0 chrX 129592367 129592505 -37057791 - B1F1 SINE Alu -5 144 7 1 1573 3431 193 43 29 chrX 129594333 129595026 -37055270 + Lx4B LINE L1 6340 7042 -16 1 1573 1059 32 6 31 chrX 129595050 129595211 -37055085 + (GAA)n Simple_repeat Simple_repeat 3 159 0 1 1573 191 170 21 0 chrX 129595452 129595499 -37054797 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1573 273 206 26 40 chrX 129596269 129596345 -37053951 + RMER5 LTR ERV1 318 392 -142 1 1573 24 0 0 0 chrX 129596443 129596467 -37053829 + AT_rich Low_complexity Low_complexity 1 24 0 1 1573 290 329 0 12 chrX 129596506 129596589 -37053707 - RSINE1 SINE B4 -1 164 83 1 1573 612 0 0 0 chrX 129597135 129597203 -37053093 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 1 1573 352 0 0 40 chrX 129597429 129597479 -37052817 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 1 1573 4223 193 76 23 chrX 129597635 129598551 -37051745 - L1_Mur3 LINE L1 -6471 1241 277 1 1573 180 0 0 0 chrX 129598556 129598576 -37051720 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1573 288 0 0 0 chrX 129598576 129598608 -37051688 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1573 863 162 91 0 chrX 129598608 129598762 -37051534 - MTD LTR MaLR -53 366 199 1 1573 629 229 116 17 chrX 129598778 129598951 -37051345 - B3 SINE B2 0 216 27 1 1573 8154 35 0 0 chrX 129598955 129600297 -37049999 - L1Md_T LINE L1 0 6582 5241 1 1573 6493 25 0 0 chrX 129600297 129601053 -37049243 + L1Md_T LINE L1 4481 5236 -647 1 1573 282 56 0 0 chrX 129601211 129601247 -37049049 + (TA)n Simple_repeat Simple_repeat 1 36 0 1 1573 322 302 131 41 chrX 129601254 129601475 -37048821 - L1MEg LINE L1 -4759 1325 1085 1 1573 3167 238 31 32 chrX 129601671 129602132 -37048164 + RMER1B Other Other 354 780 -286 1 1573 3177 76 5 0 chrX 129602132 129602551 -37047745 + BGLII LTR ERVK 1 421 0 1 1573 3167 226 34 24 chrX 129602551 129602837 -37047459 + RMER1B Other Other 781 1062 -4 1 1573 320 345 29 7 chrX 129603018 129603158 -37047138 - B1F SINE Alu -3 146 4 1 1573 270 0 0 0 chrX 129603267 129603297 -37046999 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 1 1573 248 0 0 30 chrX 129603604 129603637 -37046659 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 1573 3156 29 42 0 chrX 129603751 129604131 -37046165 - MTA_Mm LTR MaLR 0 396 1 1 1573 264 414 83 30 chrX 129604526 129604985 -37045311 + MTE-int LTR MaLR 580 1062 -518 1 1573 30 45 0 0 chrX 129605061 129605105 -37045191 + AT_rich Low_complexity Low_complexity 1 44 0 1 1573 317 363 121 64 chrX 129605109 129605498 -37044798 + MTE-int LTR MaLR 1109 1519 -61 1 1573 304 284 68 17 chrX 129605553 129605671 -37044625 - MTEa LTR MaLR -11 368 245 1 1573 3728 198 123 22 chrX 129605731 129606868 -37043428 - Lx5 LINE L1 -7 7043 5780 1 1573 1823 190 27 70 chrX 129606872 129607274 -37043022 - RLTR41 LTR ERV1 0 446 62 1 1573 610 204 19 31 chrX 129607274 129607299 -37042997 - Lx5 LINE L1 -1251 5807 5782 1 1573 1652 88 0 74 chrX 129607299 129607570 -37042726 - L1_Mus2 LINE L1 -2 6564 6314 1 1573 650 184 8 9 chrX 129607570 129607708 -37042588 - Lx5 LINE L1 -1277 5781 5646 1 1573 22 56 0 0 chrX 129607712 129607748 -37042548 + AT_rich Low_complexity Low_complexity 1 36 0 1 1573 1860 241 33 7 chrX 129607789 129608240 -37042056 - Lx9 LINE L1 -190 7454 6992 1 1573 222 169 49 49 chrX 129608242 129608323 -37041973 + T-rich Low_complexity Low_complexity 4 84 0 1 1573 4739 54 2 5 chrX 129608325 129608923 -37041373 - L1Md_F2 LINE L1 -4 6578 5983 1 1573 353 163 32 32 chrX 129608995 129609090 -37041206 - Lx2B LINE L1 -6 6994 6900 1 1573 3470 152 182 53 chrX 129609116 129609929 -37040367 - Lx2B LINE L1 -6 6994 6077 1 1573 2605 255 18 36 chrX 129609926 129610593 -37039703 - Lx7 LINE L1 -685 7011 6357 1 1573 232 273 18 0 chrX 129610688 129610743 -37039553 - Lx9 LINE L1 -1710 5934 5879 1 1573 643 215 79 62 chrX 129610731 129610997 -37039299 + Lx9 LINE L1 5863 6244 -1400 1 1573 421 357 57 6 chrX 129611179 129611337 -37038959 - MTEa LTR MaLR -213 166 1 1 1573 221 139 23 0 chrX 129612053 129612096 -37038200 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1573 247 226 48 0 chrX 129612156 129612240 -37038056 - L1MEe LINE L1 -3737 1117 1030 1 1573 1469 179 253 72 chrX 129612388 129612972 -37037324 - RMER6C LTR ERVK 0 690 1 1 1573 1437 215 9 23 chrX 129613109 129613134 -37037162 - Lx3_Mus LINE L1 -1080 5929 5908 1 1573 2980 73 0 17 chrX 129613134 129613536 -37036760 - L1_Mus1 LINE L1 0 6567 6173 1 1573 6335 115 7 25 chrX 129613536 129614343 -37035953 - Lx3_Mus LINE L1 -1102 5907 5100 1 1573 231 36 0 0 chrX 129614343 129614371 -37035925 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 1 1573 1059 100 0 0 chrX 129614376 129614516 -37035780 - B1_Mm SINE Alu -6 141 2 1 1573 6335 112 7 25 chrX 129614516 129614706 -37035590 - Lx3_Mus LINE L1 -784 5099 4923 1 1573 5475 94 2 2 chrX 129614705 129615507 -37034789 + L1_Mm LINE L1 1659 2460 -3423 1 1573 5321 152 28 15 chrX 129615509 129617141 -37033155 - Lx3_Mus LINE L1 -4229 1654 98 1 1573 1917 329 129 18 chrX 129618063 129619237 -37031059 + Lx8 LINE L1 5847 7151 -322 1 1573 653 24 12 0 chrX 129619281 129619364 -37030932 + (GA)n Simple_repeat Simple_repeat 2 85 0 1 1573 467 163 20 0 chrX 129620103 129620201 -37030095 - Lx5 LINE L1 -11 7039 6940 1 1573 661 229 237 30 chrX 129621163 129621492 -37028804 + Lx8 LINE L1 7077 7473 0 1 1573 246 291 18 68 chrX 129622045 129622169 -37028127 - MIRc SINE MIR -96 180 57 1 1573 2188 238 4 4 chrX 129622348 129622816 -37027480 - Lx5 LINE L1 -1 7049 6582 1 1573 4291 98 43 59 chrX 129622889 129623635 -37026661 - RMER17A LTR ERVK -17 734 1 1 1573 1811 233 61 118 chrX 129623635 129624238 -37026058 + Lx5 LINE L1 5849 6425 -625 1 1573 1717 144 6 56 chrX 129624238 129624577 -37025719 + RLTRETN_Mm LTR ERVK 1 322 0 1 1573 1811 233 61 118 chrX 129624577 129624625 -37025671 + Lx5 LINE L1 6426 6463 -587 1 1573 1512 152 107 57 chrX 129624626 129624926 -37025370 + ORR1A3 LTR MaLR 2 316 -10 1 1573 899 122 0 31 chrX 129624942 129625103 -37025193 + L1Md_F2 LINE L1 6415 6570 -12 1 1573 779 185 0 7 chrX 129625108 129625244 -37025052 + Lx5 LINE L1 6459 6593 -457 1 1573 225 189 0 54 chrX 129625321 129625377 -37024919 + T-rich Low_complexity Low_complexity 2 54 0 1 1573 339 282 72 9 chrX 129626419 129626530 -37023766 + PB1D7 SINE Alu 2 119 -1 1 1573 21 36 0 0 chrX 129626909 129626937 -37023359 + AT_rich Low_complexity Low_complexity 1 28 0 1 1573 279 0 0 0 chrX 129627849 129627880 -37022416 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1573 348 24 0 0 chrX 129628256 129628297 -37021999 + (CAA)n Simple_repeat Simple_repeat 2 42 0 2 1574 2939 9 0 0 chrX 129630961 129631295 -37019001 - L1_Mm LINE L1 -332 5551 5218 2 1574 273 163 0 0 chrX 129632196 129632245 -37018051 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 1574 534 119 0 0 chrX 129632325 129632409 -37017887 + (TA)n Simple_repeat Simple_repeat 2 85 0 2 1574 502 238 107 20 chrX 129632409 129632559 -37017737 + ORR1D2 LTR MaLR 208 370 0 2 1574 523 321 97 0 chrX 129632882 129633078 -37017218 - B3 SINE B2 0 216 2 2 1574 686 272 110 24 chrX 129633881 129634291 -37016005 - L1MA4 LINE L1 -197 5959 5514 2 1574 30550 130 22 18 chrX 129634630 129640923 -37009373 - L1_Mus2 LINE L1 -2 6564 245 2 1574 772 259 0 51 chrX 129641140 129641356 -37008940 + Lx7 LINE L1 7207 7411 -285 2 1574 274 281 0 11 chrX 129641363 129641453 -37008843 + (TG)n Simple_repeat Simple_repeat 2 90 0 2 1574 8482 107 52 39 chrX 129645109 129646506 -37003790 + Lx3_Mus LINE L1 5587 7002 -7 2 1574 25 31 0 0 chrX 129646582 129646614 -37003682 + AT_rich Low_complexity Low_complexity 1 32 0 2 1574 1053 47 0 0 chrX 129646688 129646816 -37003480 - L1Md_F2 LINE L1 -769 5813 5686 2 1574 6091 56 0 17 chrX 129646817 129647597 -37002699 + L1Md_F2 LINE L1 5805 6571 -11 2 1574 704 256 53 14 chrX 129647687 129647925 -37002371 - Lx4B LINE L1 0 7058 6729 2 1574 9002 3 0 0 chrX 129648615 129650024 -37000272 - L1Md_A LINE L1 0 6582 5174 2 1574 3500 251 72 16 chrX 129650507 129651498 -36998798 + Lx9 LINE L1 6597 7642 -2 2 1574 6017 87 6 1 chrX 129651975 129652812 -36997484 + L1_Mus3 LINE L1 5792 6632 -6 2 1574 249 264 33 44 chrX 129653896 129653987 -36996309 + MIRb SINE MIR 117 206 -62 2 1574 304 260 14 14 chrX 129654077 129654151 -36996145 - ID4_ SINE ID -8 75 2 2 1574 24 32 0 0 chrX 129654587 129654618 -36995678 + AT_rich Low_complexity Low_complexity 1 31 0 2 1574 396 40 0 0 chrX 129655107 129655157 -36995139 + (CAGA)n Simple_repeat Simple_repeat 4 53 0 2 1574 192 77 0 0 chrX 129656100 129656126 -36994170 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2 1574 653 265 22 50 chrX 129656559 129656781 -36993515 + B3 SINE B2 1 216 0 2 1574 357 275 18 9 chrX 129658533 129658643 -36991653 - L1M5 LINE L1 -514 5650 5540 2 1574 344 22 0 22 chrX 129658757 129658803 -36991493 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1574 1088 292 115 34 chrX 129659165 129659662 -36990634 - Lx8 LINE L1 0 7473 6937 2 1574 300 346 87 48 chrX 129659676 129659928 -36990368 - L1M5 LINE L1 -995 5151 4890 2 1574 1684 278 129 20 chrX 129659988 129660351 -36989945 + Charlie13a DNA Charlie 127 529 -985 2 1574 815 76 0 16 chrX 129660351 129660472 -36989824 + (TTC)n Simple_repeat Simple_repeat 2 120 0 2 1574 1684 278 129 20 chrX 129660472 129660790 -36989506 + Charlie13a DNA Charlie 530 881 -633 2 1574 22 0 0 0 chrX 129660986 129661008 -36989288 + AT_rich Low_complexity Low_complexity 1 22 0 2 1574 666 267 105 74 chrX 129661170 129661494 -36988802 + LTR40a LTR ERVL 1 334 -185 2 1574 336 75 55 36 chrX 129661518 129661573 -36988723 + HAL1-3A_ME LINE L1 1975 2030 -828 2 1574 1358 265 59 5 chrX 129662112 129662487 -36987809 + Charlie13a DNA Charlie 882 1276 -238 2 1574 593 193 211 34 chrX 129662706 129662828 -36987468 - Lx9 LINE L1 -1 7643 7479 2 1574 579 15 0 0 chrX 129662828 129662896 -36987400 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 1574 378 0 0 0 chrX 129662896 129662937 -36987359 + (GA)n Simple_repeat Simple_repeat 1 42 0 2 1574 593 193 211 34 chrX 129662937 129663022 -36987274 - Lx9 LINE L1 -166 7478 7399 2 1574 576 251 19 12 chrX 129663060 129663221 -36987075 - Lx9 LINE L1 -1673 5971 5810 2 1574 650 260 14 0 chrX 129663319 129663465 -36986831 - B1_Mur4 SINE Alu -1 149 2 2 1574 1438 240 65 3 chrX 129663507 129663874 -36986422 - Lx5 LINE L1 -8 7042 6653 2 1574 333 254 7 160 chrX 129663874 129664024 -36986272 - MT2B LTR ERVL -300 301 175 2 1574 596 232 18 0 chrX 129663922 129664034 -36986262 - B1_Mur4 SINE Alu -35 115 2 2 1574 255 297 144 29 chrX 129664080 129664184 -36986112 + B3A SINE B2 61 176 -22 2 1574 408 165 9 37 chrX 129664188 129664295 -36986001 + Lx5 LINE L1 6947 7050 0 2 1574 445 260 131 11 chrX 129664298 129664481 -36985815 + L1_Rod LINE L1 5019 5223 -624 2 1574 366 161 16 0 chrX 129664481 129664543 -36985753 - MT2B LTR ERVL -527 74 12 2 1574 240 86 0 0 chrX 129664543 129664578 -36985718 + (A)n Simple_repeat Simple_repeat 1 35 0 2 1574 1278 220 35 3 chrX 129664586 129664869 -36985427 - Lx9 LINE L1 -380 7264 6973 2 1574 294 29 0 0 chrX 129664889 129664924 -36985372 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1574 329 350 0 0 chrX 129666387 129666490 -36983806 + PB1D10 SINE Alu 1 103 -14 2 1574 316 252 207 0 chrX 129666537 129666648 -36983648 - L1ME4a LINE L1 -43 6081 5948 2 1574 646 218 0 12 chrX 129666905 129667072 -36983224 + L1Md_T LINE L1 102 266 -6350 2 1574 34711 60 1 23 chrX 129667058 129672849 -36977447 + L1Md_T LINE L1 99 5586 -297 2 1574 8013 55 0 0 chrX 129672849 129673844 -36976452 + L1Md_T LINE L1 5587 6581 -1 2 1574 1245 254 84 14 chrX 129673856 129674215 -36976081 - MTD LTR MaLR -2 417 34 2 1574 723 311 58 17 chrX 129674225 129674692 -36975604 - L1MA6 LINE L1 -122 6178 5693 2 1574 483 18 0 0 chrX 129674694 129674750 -36975546 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1574 686 306 60 25 chrX 129674787 129675072 -36975224 - MT2A LTR ERVL -2 531 237 2 1574 1109 217 19 11 chrX 129675164 129675425 -36974871 - Lx9 LINE L1 -268 7376 7114 2 1574 480 271 87 45 chrX 129676272 129676558 -36973738 - L1MA6 LINE L1 -657 5643 5346 2 1574 281 289 0 49 chrX 129676558 129676660 -36973636 - ID4 SINE ID -51 101 5 2 1574 583 266 143 18 chrX 129676661 129677052 -36973244 - L1MA6 LINE L1 -813 5330 4891 2 1574 530 149 18 0 chrX 129677714 129677828 -36972468 + (TAGA)n Simple_repeat Simple_repeat 2 117 0 2 1574 315 189 0 0 chrX 129677843 129677896 -36972400 + HAL1-3A_ME LINE L1 1975 2027 -831 2 1574 850 321 21 27 chrX 129677915 129678251 -36972045 + Lx9 LINE L1 6376 6709 -935 2 1574 1377 198 104 21 chrX 129678340 129678629 -36971667 + RLTR25B LTR ERVK 7 319 -709 2 1574 1822 190 132 24 chrX 129678622 129679076 -36971220 + RLTR25B LTR ERVK 496 998 -30 2 1574 1047 202 13 8 chrX 129679216 129679476 -36970820 + L1_Mur2 LINE L1 921 1162 -5927 2 1574 1777 216 7 2 chrX 129679557 129679989 -36970307 + L1_Mur2 LINE L1 1587 2020 -3869 2 1574 32255 98 5 23 chrX 129679987 129686779 -36963517 - L1Md_F2 LINE L1 -1 6581 98 2 1574 461 194 99 26 chrX 129686781 129686972 -36963324 + L1_Mur3 LINE L1 2009 2213 -3667 2 1574 4286 165 4 0 chrX 129686976 129687740 -36962556 - L1_Mm LINE L1 -306 5577 4811 2 1574 1921 199 26 26 chrX 129687772 129688385 -36961911 + Lx2B LINE L1 5391 6003 -1055 2 1574 597 270 34 105 chrX 129688672 129688966 -36961330 - RLTR16 LTR ERVK -209 296 24 2 1574 2348 213 16 21 chrX 129688980 129689556 -36960740 + Lx2B LINE L1 6026 6598 -402 2 1574 680 227 13 47 chrX 129689553 129689745 -36960551 + Lx2B LINE L1 6704 7003 -55 2 1574 3890 211 79 17 chrX 129689922 129691424 -36958872 + Lx4B LINE L1 5350 7058 0 2 1574 681 301 57 4 chrX 129691455 129691718 -36958578 + Lx9 LINE L1 6696 6972 -672 2 1574 623 91 0 0 chrX 129691720 129691808 -36958488 - ORR1A4 LTR MaLR 0 329 242 2 1574 298 308 0 0 chrX 129691806 129691871 -36958425 + RLTR18B LTR ERVK 121 185 -327 2 1574 282 259 0 0 chrX 129691867 129691921 -36958375 - RLTR18B LTR ERVK -338 174 121 2 1574 848 261 21 69 chrX 129691924 129692225 -36958071 - RLTR18B LTR ERVK -333 283 1 2 1574 1082 128 0 11 chrX 129692285 129692467 -36957829 + (TATG)n Simple_repeat Simple_repeat 1 180 0 2 1574 386 214 0 19 chrX 129692467 129692572 -36957724 + (TATATG)n Simple_repeat Simple_repeat 2 104 0 2 1574 239 242 76 25 chrX 129692579 129692736 -36957560 + Lx9 LINE L1 7458 7622 -22 2 1574 233 314 101 46 chrX 129692796 129693033 -36957263 - L1M5 LINE L1 -439 5685 5436 2 1574 3532 42 7 0 chrX 129693197 129693625 -36956671 + L1Md_F2 LINE L1 6152 6582 0 2 1574 415 320 32 9 chrX 129693901 129694122 -36956174 - Lx9 LINE L1 -175 7469 7244 2 1574 384 22 0 0 chrX 129694565 129694610 -36955686 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1574 370 169 15 0 chrX 129695063 129695128 -36955168 - HAL1-3A_ME LINE L1 -815 2043 1978 2 1574 201 139 0 0 chrX 129695171 129695214 -36955082 + (TC)n Simple_repeat Simple_repeat 2 44 0 2 1574 234 0 0 0 chrX 129695218 129695244 -36955052 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1574 2937 162 81 12 chrX 129695403 129696173 -36954123 - L1_Mur1 LINE L1 -5821 1161 82 2 1574 5720 106 21 1 chrX 129696193 129697018 -36953278 + Lx3_Mus LINE L1 6164 7004 -5 2 1574 1200 61 0 0 chrX 129697061 129697208 -36953088 + B1_Mm SINE Alu 1 147 0 2 1574 2228 107 16 27 chrX 129697218 129697584 -36952712 + L1_Mus2 LINE L1 6205 6566 0 2 1574 228 35 0 0 chrX 129697613 129697642 -36952654 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2 1574 552 296 95 19 chrX 129698118 129698496 -36951800 - Lx7 LINE L1 -1360 6336 5930 2 1574 306 79 31 16 chrX 129698519 129698583 -36951713 + (CAAAAA)n Simple_repeat Simple_repeat 1 65 0 2 1574 24 32 0 0 chrX 129698833 129698864 -36951432 + AT_rich Low_complexity Low_complexity 1 31 0 2 1574 434 221 51 23 chrX 129699126 129699302 -36950994 + RMER17C LTR ERVK 95 275 -135 2 1574 185 0 40 0 chrX 129699306 129699331 -36950965 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 2 1574 459 0 0 0 chrX 129699340 129699391 -36950905 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1574 330 350 32 77 chrX 129699396 129699551 -36950745 - RSINE1 SINE B4 -6 159 12 2 1574 373 281 63 40 chrX 129700172 129700298 -36949998 - B1F1 SINE Alu 0 149 21 2 1574 284 396 19 19 chrX 129700174 129700336 -36949960 - ID_B1 SINE B4 0 224 63 2 1574 329 346 33 17 chrX 129701069 129701316 -36948980 - L2c LINE L2 -168 3219 2965 2 1574 378 0 0 0 chrX 129701609 129701651 -36948645 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1574 323 310 120 0 chrX 129701657 129701757 -36948539 - RSINE1 SINE B4 -51 114 3 2 1574 3292 47 5 5 chrX 129701827 129702235 -36948061 + L1Md_F2 LINE L1 6173 6580 -2 2 1574 654 105 0 0 chrX 129702323 129702428 -36947868 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 2 1574 22 35 0 0 chrX 129702575 129702604 -36947692 + AT_rich Low_complexity Low_complexity 1 29 0 2 1574 23 0 0 0 chrX 129702754 129702777 -36947519 + AT_rich Low_complexity Low_complexity 1 23 0 2 1574 442 330 58 93 chrX 129702925 129703407 -36946889 + Lx8 LINE L1 7003 7467 -6 2 1574 218 141 40 66 chrX 129703411 129703487 -36946809 + (TTAAA)n Simple_repeat Simple_repeat 2 75 0 2 1574 4409 64 0 2 chrX 129703504 129704068 -36946228 + L1Md_F2 LINE L1 6015 6577 -5 3 1574 37 0 0 0 chrX 129704068 129704105 -36946191 + AT_rich Low_complexity Low_complexity 1 37 0 3 1574 278 391 7 22 chrX 129704130 129704266 -36946030 - L2c LINE L2 -433 2986 2853 2 1574 28 61 0 0 chrX 129705565 129705614 -36944682 + AT_rich Low_complexity Low_complexity 1 49 0 3 1574 420 170 0 11 chrX 129705615 129705710 -36944586 - Lx3A LINE L1 -7 6974 6881 3 1574 596 136 0 20 chrX 129705849 129705947 -36944349 + MTC LTR MaLR 1 96 -325 3 1574 842 282 71 11 chrX 129705947 129706363 -36943933 + Lx6 LINE L1 5903 6363 -687 3 1574 1042 310 82 29 chrX 129706396 129706842 -36943454 + Lx6 LINE L1 6506 7337 -123 3 1574 252 0 0 0 chrX 129706842 129706870 -36943426 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 1574 1042 307 82 27 chrX 129706870 129706956 -36943340 + Lx6 LINE L1 7338 7445 -15 3 1574 7320 60 7 1 chrX 129706949 129707922 -36942374 - L1_Mus1 LINE L1 -1 6566 5588 3 1574 1116 253 69 24 chrX 129707986 129708274 -36942022 + MTC LTR MaLR 115 415 -6 3 1574 2324 121 53 41 chrX 129708628 129709042 -36941254 + Lx LINE L1 6226 6644 -10 3 1574 1254 209 6 44 chrX 129709045 129709366 -36940930 + L1_Mur1 LINE L1 7 315 -6667 3 1574 531 133 0 0 chrX 129709405 129709503 -36940793 + L1_Mus2 LINE L1 6468 6565 -1 3 1574 23 33 0 0 chrX 129709503 129709533 -36940763 + AT_rich Low_complexity Low_complexity 1 30 0 3 1574 403 145 0 0 chrX 129709533 129709602 -36940694 + L1_Mur1 LINE L1 553 621 -6361 3 1574 2272 90 45 0 chrX 129709593 129709927 -36940369 + L1_Mus4 LINE L1 6033 6381 -255 3 1574 644 86 8 30 chrX 129709928 129710060 -36940236 + L1_Mus4 LINE L1 6508 6636 0 3 1574 1433 166 68 23 chrX 129710046 129710205 -36940091 + L1_Mur1 LINE L1 607 782 -6200 3 1574 3417 219 64 61 chrX 129710205 129711160 -36939136 - RMER17B LTR ERVK 0 958 1 3 1574 1433 166 68 23 chrX 129711160 129711309 -36938987 + L1_Mur1 LINE L1 783 929 -6053 3 1574 1389 138 8 29 chrX 129711309 129711555 -36938741 + Lx LINE L1 6409 6649 -5 3 1574 812 317 44 22 chrX 129711555 129711894 -36938402 + Lx8 LINE L1 6443 6791 -682 3 1574 1239 28 14 0 chrX 129712053 129712198 -36938098 + B1_Mus2 SINE Alu 1 147 0 3 1574 203 159 0 45 chrX 129712199 129712265 -36938031 + A-rich Low_complexity Low_complexity 1 63 0 3 1574 525 80 0 0 chrX 129712251 129712326 -36937970 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 3 1574 220 200 0 0 chrX 129712989 129713044 -36937252 + T-rich Low_complexity Low_complexity 1 55 0 3 1574 216 0 0 0 chrX 129713444 129713468 -36936828 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1574 5390 63 6 25 chrX 129713616 129714337 -36935959 - L1Md_F2 LINE L1 -12 6570 5864 3 1574 213 191 30 45 chrX 129715346 129715412 -36934884 + CT-rich Low_complexity Low_complexity 3 67 0 3 1574 440 255 178 0 chrX 129715714 129715871 -36934425 + Lx9 LINE L1 7233 7417 -227 3 1574 483 63 0 0 chrX 129715874 129715937 -36934359 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 1574 685 153 0 26 chrX 129715937 129716091 -36934205 + (TG)n Simple_repeat Simple_repeat 2 151 0 3 1574 396 48 0 46 chrX 129716091 129716156 -36934140 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 1574 243 0 0 0 chrX 129716184 129716211 -36934085 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 1574 22 0 0 0 chrX 129716274 129716296 -36934000 + AT_rich Low_complexity Low_complexity 1 22 0 3 1574 287 341 58 71 chrX 129717484 129717832 -36932464 - MLT1I LTR MaLR -2 442 69 3 1574 343 387 45 32 chrX 129719678 129719924 -36930372 + LTR78 LTR ERV1 156 404 -900 3 1574 222 136 0 0 chrX 129720214 129720258 -36930038 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 1574 324 362 28 14 chrX 129720592 129720735 -36929561 + LTR78 LTR ERV1 1137 1281 -23 3 1574 279 114 0 0 chrX 129720845 129720889 -36929407 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 3 1574 4358 207 68 16 chrX 129720904 129721907 -36928389 - Lx5 LINE L1 -44 7006 5952 3 1574 380 288 8 8 chrX 129721955 129722074 -36928222 + CT-rich Low_complexity Low_complexity 2 120 0 3 1574 918 104 0 0 chrX 129722077 129722240 -36928056 + (TC)n Simple_repeat Simple_repeat 2 164 0 3 1574 312 219 141 0 chrX 129722242 129722306 -36927990 - BC1_Mm scRNA scRNA -79 73 1 3 1574 911 252 0 29 chrX 129722341 129722549 -36927747 + B3 SINE B2 2 203 -13 3 1574 555 208 0 0 chrX 129722549 129722669 -36927627 + (TA)n Simple_repeat Simple_repeat 1 120 0 3 1574 1130 221 144 47 chrX 129722669 129722734 -36927562 + Lx9 LINE L1 7201 7262 -382 3 1574 1999 144 10 0 chrX 129722734 129723040 -36927256 + RLTR27 LTR ERVK 1 309 0 3 1574 1130 221 144 47 chrX 129723040 129723378 -36926918 + Lx9 LINE L1 7263 7643 -1 3 1574 22 35 0 0 chrX 129723401 129723430 -36926866 + AT_rich Low_complexity Low_complexity 1 29 0 3 1574 1067 86 0 14 chrX 129723431 129723572 -36926724 + B1_Mus2 SINE Alu 2 140 -7 3 1574 306 0 0 0 chrX 129723574 129723608 -36926688 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1574 186 43 0 0 chrX 129724526 129724549 -36925747 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 1574 639 250 139 70 chrX 129724913 129725128 -36925168 - Lx8 LINE L1 -899 6574 6345 3 1574 925 219 31 10 chrX 129725430 129725624 -36924672 + URR1A DNA MER1_type 28 225 -1 3 1574 312 305 83 37 chrX 129725624 129725652 -36924644 - CYRA11_Mm Unknown Y-chromosome -434 183 146 3 1574 234 309 60 53 chrX 129725973 129726106 -36924190 - MLT1A LTR MaLR -227 147 14 3 1574 28 29 0 0 chrX 129726323 129726358 -36923938 + AT_rich Low_complexity Low_complexity 1 35 0 3 1574 23 0 0 0 chrX 129726420 129726443 -36923853 + AT_rich Low_complexity Low_complexity 1 23 0 3 1574 5749 198 32 8 chrX 129726446 129727810 -36922486 - Lx4B LINE L1 -266 6792 5453 3 1574 10282 158 9 11 chrX 129727809 129729686 -36920610 + L1_Mur2 LINE L1 3635 5508 -369 3 1574 562 177 6 6 chrX 129729706 129729865 -36920431 + (TA)n Simple_repeat Simple_repeat 2 160 0 3 1574 21 0 0 0 chrX 129730051 129730072 -36920224 + AT_rich Low_complexity Low_complexity 1 21 0 3 1574 546 322 11 50 chrX 129730350 129730530 -36919766 + MTEb LTR MaLR 10 182 -197 3 1574 759 250 1 17 chrX 129730793 129730966 -36919330 + B3A SINE B2 6 164 -52 3 1574 3079 53 5 10 chrX 129731101 129731497 -36918799 - MTA_Mm LTR MaLR 0 396 3 3 1574 230 337 109 0 chrX 129731518 129731619 -36918677 - MLT1A LTR MaLR -4 370 259 3 1574 8533 122 47 12 chrX 129731636 129732989 -36917307 - Lx2A1 LINE L1 0 7008 5609 3 1574 3344 168 22 47 chrX 129732990 129733671 -36916625 + Lx2A1 LINE L1 4922 5585 -292 3 1574 685 267 50 15 chrX 129733705 129733903 -36916393 + MTEb LTR MaLR 175 379 0 3 1574 1986 126 99 26 chrX 129734699 129735082 -36915214 + RLTR10A LTR ERVK 1 411 0 3 1574 261 235 24 12 chrX 129735872 129735954 -36914342 - MLT1B LTR MaLR -219 171 89 3 1574 251 381 43 36 chrX 129736522 129736661 -36913635 + MER63A DNA AcHobo 2 141 -69 3 1574 372 348 144 5 chrX 129737476 129737886 -36912410 - Lx8 LINE L1 -7 7466 7000 3 1574 2738 79 0 33 chrX 129737911 129738304 -36911992 - L1Md_F2 LINE L1 -3 6579 6200 3 1574 15386 88 4 9 chrX 129738316 129741160 -36909136 - L1_Mus2 LINE L1 -1 6565 3735 3 1574 1806 338 43 24 chrX 129741180 129742073 -36908223 - Lx8 LINE L1 -306 7167 6258 3 1574 10054 90 25 7 chrX 129742076 129744435 -36905861 - Lx3_Mus LINE L1 -184 6825 4419 3 1574 1175 269 67 8 chrX 129744457 129744817 -36905479 + Charlie10 DNA MER1_type 2094 2474 -348 3 1574 2306 189 0 12 chrX 129746962 129747386 -36902910 - MTD LTR MaLR 0 419 1 3 1574 369 321 63 24 chrX 129747646 129747732 -36902564 - L1MC4 LINE L1 -275 7767 7676 3 1574 4676 147 58 25 chrX 129747732 129748609 -36901687 - RMER17A2 LTR ERVK 0 906 1 3 1574 369 321 63 24 chrX 129748609 129748854 -36901442 - L1MC4 LINE L1 -367 7675 7423 3 1574 734 360 32 18 chrX 129749300 129749580 -36900716 + B4A SINE B4 1 284 -8 3 1574 180 0 0 0 chrX 129749627 129749647 -36900649 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 1574 591 239 21 60 chrX 129750398 129750680 -36899616 + Lx7 LINE L1 7200 7696 0 3 1574 275 193 0 12 chrX 129753259 129753343 -36896953 + GA-rich Low_complexity Low_complexity 2 84 0 3 1574 737 168 8 0 chrX 129754132 129754251 -36896045 - URR1B DNA MER1_type -103 122 3 3 1574 25 0 0 0 chrX 129754377 129754402 -36895894 + AT_rich Low_complexity Low_complexity 1 25 0 3 1574 2340 117 3 72 chrX 129754891 129755277 -36895019 - RLTR10D LTR ERVK 0 359 1 3 1574 407 283 47 0 chrX 129755403 129755509 -36894787 - B1_Mur1 SINE Alu -5 144 34 3 1574 979 123 14 0 chrX 129755544 129755690 -36894606 - B1_Mus1 SINE Alu 0 148 1 3 1574 6409 77 9 9 chrX 129755998 129756864 -36893432 + L1Md_F2 LINE L1 5704 6569 -13 3 1574 2401 83 97 18 chrX 129756906 129757287 -36893009 + IAPLTR2a LTR ERVK 1 411 0 3 1574 888 123 27 90 chrX 129757312 129757500 -36892796 + IAPEz-int LTR ERVK 18 193 -6288 3 1574 234 308 0 0 chrX 129757500 129757552 -36892744 + RLTR27 LTR ERVK 221 272 -37 3 1574 3530 63 1 16 chrX 129757552 129758133 -36892163 + IAPEz-int LTR ERVK 165 662 -5819 3 1574 2685 67 0 3 chrX 129758133 129758476 -36891820 + IAPEz-int LTR ERVK 1359 1700 -4781 3 1574 6222 70 11 17 chrX 129758469 129759303 -36890993 + IAPEz-int LTR ERVK 5651 6479 -2 3 1574 1208 117 27 0 chrX 129759305 129759493 -36890803 + IAPLTR2a LTR ERVK 1 193 -134 3 1574 609 292 36 41 chrX 129760087 129760308 -36889988 - MLT1B LTR MaLR 0 390 171 3 1574 287 267 78 0 chrX 129760450 129760540 -36889756 - MLT1B LTR MaLR -292 98 2 3 1574 474 18 0 0 chrX 129761051 129761106 -36889190 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1575 13309 112 18 13 chrX 129761875 129764786 -36885510 - L1VL2 LINE L1 -596 3019 98 3 1575 184 54 81 0 chrX 129764867 129764904 -36885392 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 3 1575 4513 94 33 0 chrX 129767056 129767685 -36882611 - L1_Mus2 LINE L1 -1 6565 5916 3 1575 2860 178 44 23 chrX 129767686 129768945 -36881351 - L1VL4 LINE L1 -2387 1430 142 3 1575 192 302 71 54 chrX 129769270 129769438 -36880858 + L2 LINE L2 2842 3012 -407 3 1575 901 284 77 19 chrX 129770140 129770452 -36879844 - Lx8 LINE L1 -5 7468 7139 3 1575 635 366 38 47 chrX 129771069 129771410 -36878886 + MTEa LTR MaLR 1 338 -41 3 1575 283 347 3 36 chrX 129771514 129771656 -36878640 + B3A SINE B2 39 169 -47 3 1575 480 111 0 0 chrX 129771661 129771733 -36878563 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 1575 1099 260 101 46 chrX 129771778 129772234 -36878062 + Lx8 LINE L1 6990 7470 -3 3 1575 246 353 25 25 chrX 129772727 129772846 -36877450 - MIRm SINE MIR 0 276 158 3 1575 23 0 0 0 chrX 129773286 129773309 -36876987 + AT_rich Low_complexity Low_complexity 1 23 0 3 1575 3884 230 75 48 chrX 129773360 129774247 -36876049 - Lx5 LINE L1 -588 6872 5664 3 1575 1853 44 0 0 chrX 129774247 129774472 -36875824 + L1Md_T LINE L1 6358 6582 0 3 1575 3884 195 39 16 chrX 129774472 129775094 -36875202 - Lx5 LINE L1 -208 5669 5030 3 1575 1168 199 20 0 chrX 129775091 129775342 -36874954 + L1_Mur2 LINE L1 4032 4287 -1590 4 1575 595 170 0 0 chrX 129775333 129775433 -36874863 + L1_Mur2 LINE L1 4917 5016 -861 4 1575 2227 70 0 7 chrX 129775615 129775919 -36874377 + L1Md_F2 LINE L1 6281 6582 0 4 1575 3716 65 2 4 chrX 129776602 129777084 -36873212 + L1_Mus2 LINE L1 6086 6566 0 4 1575 996 55 0 0 chrX 129777681 129777808 -36872488 + (TC)n Simple_repeat Simple_repeat 2 128 0 4 1575 512 68 14 0 chrX 129778424 129778497 -36871799 + (GA)n Simple_repeat Simple_repeat 1 74 0 4 1575 4147 105 13 0 chrX 129778594 129779205 -36871091 - L1_Mus3 LINE L1 -3 6635 6017 4 1575 3300 113 14 10 chrX 129779208 129779707 -36870589 - L1_Mus3 LINE L1 -212 6426 5926 4 1575 5975 114 26 10 chrX 129779707 129780698 -36869598 + MusHAL1 LINE L1 1318 2324 -388 4 1575 609 233 20 129 chrX 129780709 129780911 -36869385 - L1VL1 LINE L1 -6024 398 219 4 1575 228 314 14 0 chrX 129781001 129781071 -36869225 + LTR16B LTR ERVL 351 421 -42 4 1575 258 329 14 0 chrX 129781684 129781757 -36868539 + ID4_ SINE ID 8 81 -2 4 1575 704 167 8 8 chrX 129782142 129782275 -36868021 - RMER4B LTR ERVK -430 155 23 4 1575 249 349 37 37 chrX 129782286 129782420 -36867876 + LTR16B LTR ERVL 313 446 -17 4 1575 452 335 20 56 chrX 129782473 129782669 -36867627 + MLT1H LTR MaLR 72 260 -289 4 1575 21 0 0 0 chrX 129783033 129783054 -36867242 + AT_rich Low_complexity Low_complexity 1 21 0 4 1575 337 283 145 43 chrX 129783361 129783616 -36866680 + L1MEg LINE L1 1039 1319 -4765 4 1575 457 310 63 24 chrX 129783644 129783898 -36866398 - L1MA9 LINE L1 -188 6124 5861 4 1575 402 271 85 9 chrX 129783910 129784108 -36866188 + L1M2 LINE L1 5375 5595 -696 4 1575 760 172 229 5 chrX 129784113 129784323 -36865973 - Lx4B LINE L1 -804 6254 5998 4 1575 2551 77 3 6 chrX 129784334 129784686 -36865610 - L1Md_F2 LINE L1 -15 6567 6217 4 1575 3413 148 0 45 chrX 129784686 129785328 -36864968 - Lx4B LINE L1 -517 5360 4748 4 1575 195 69 0 0 chrX 129785515 129785544 -36864752 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1575 397 396 8 34 chrX 129785694 129785929 -36864367 - L3 LINE CR1 -387 4102 3874 4 1575 200 176 0 0 chrX 129786998 129787032 -36863264 + (CACCC)n Simple_repeat Simple_repeat 3 36 0 4 1575 1511 11 6 0 chrX 129787037 129787214 -36863082 + (TCTCCC)n Simple_repeat Simple_repeat 3 180 0 4 1575 384 356 17 69 chrX 129789239 129789414 -36860882 - MIRb SINE MIR -67 201 36 4 1575 266 224 52 0 chrX 129789570 129789628 -36860668 + MIRm SINE MIR 204 264 -12 4 1575 186 250 23 0 chrX 129789589 129789633 -36860663 + L2c LINE L2 3334 3378 -9 4 1575 7598 72 6 1 chrX 129791405 129792730 -36857566 - L1Md_F2 LINE L1 0 6582 5250 4 1575 1909 65 0 0 chrX 129792727 129792974 -36857322 + L1Md_F2 LINE L1 5001 5247 -636 4 1575 2867 189 68 2 chrX 129793198 129793785 -36856511 + Lx3C LINE L1 6349 6974 -2 4 1575 5491 234 45 16 chrX 129793956 129795300 -36854996 + Lx7 LINE L1 5654 7036 -660 4 1575 407 115 0 0 chrX 129795295 129795356 -36854940 - Lx LINE L1 -856 5798 5738 4 1575 1634 186 8 46 chrX 129795379 129795746 -36854550 + L1_Mur1 LINE L1 1 353 -6629 4 1575 1883 127 255 29 chrX 129795746 129796193 -36854103 - RLTR6_Mm LTR ERV1 -70 584 37 4 1575 226 228 200 38 chrX 129796195 129796300 -36853996 - RLTR6_Mm LTR ERV1 -532 122 1 4 1575 265 125 0 0 chrX 129796300 129796340 -36853956 - RLTR6-int LTR ERV1 0 7778 7739 4 1575 58932 35 25 1 chrX 129796336 129803402 -36846894 - RLTR6-int LTR ERV1 -542 7236 1 4 1575 1919 128 252 29 chrX 129803417 129803869 -36846427 - RLTR6_Mm LTR ERV1 -65 589 37 4 1575 226 248 200 38 chrX 129803871 129803976 -36846320 - RLTR6_Mm LTR ERV1 -532 122 1 4 1575 4386 142 46 16 chrX 129803976 129804739 -36845557 + L1_Mur1 LINE L1 400 1185 -5797 4 1575 1173 212 17 20 chrX 129804740 129805039 -36845257 + L1VL1 LINE L1 2 299 -6123 4 1575 447 213 0 0 chrX 129805030 129805124 -36845172 + L1Md_F LINE L1 235 328 -6191 4 1575 609 217 0 0 chrX 129805121 129805241 -36845055 + L1Md_F3 LINE L1 306 425 -6191 4 1575 274 139 0 0 chrX 129805239 129805282 -36845014 + L1Md_F3 LINE L1 587 629 -5987 4 1575 406 51 17 0 chrX 129805280 129805339 -36844957 + L1Md_F3 LINE L1 928 987 -5737 4 1575 19250 55 0 1 chrX 129805316 129807766 -36842530 + L1Md_F3 LINE L1 3139 5586 -297 4 1575 7697 54 13 0 chrX 129807766 129808737 -36841559 + L1Md_F3 LINE L1 5587 6570 -14 4 1575 8467 102 9 14 chrX 129808737 129810078 -36840218 + L1_Mur1 LINE L1 1176 2519 -3367 4 1575 21 0 0 0 chrX 129810631 129810652 -36839644 + AT_rich Low_complexity Low_complexity 1 21 0 4 1575 507 327 42 28 chrX 129810687 129810901 -36839395 - MER2 DNA MER2_type -12 333 117 4 1575 25 51 0 0 chrX 129811043 129811082 -36839214 + AT_rich Low_complexity Low_complexity 1 39 0 4 1575 22 56 0 0 chrX 129811322 129811358 -36838938 + AT_rich Low_complexity Low_complexity 1 36 0 4 1575 52 17 0 0 chrX 129811821 129811880 -36838416 + AT_rich Low_complexity Low_complexity 1 59 0 4 1575 31 0 0 0 chrX 129811932 129811963 -36838333 + AT_rich Low_complexity Low_complexity 1 31 0 4 1575 345 24 0 0 chrX 129812105 129812147 -36838149 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 4 1575 1089 169 0 0 chrX 129812149 129812448 -36837848 + (TA)n Simple_repeat Simple_repeat 1 299 0 4 1575 183 80 0 0 chrX 129812628 129812653 -36837643 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1575 2117 168 80 0 chrX 129812759 129813170 -36837126 - Lx2 LINE L1 -3 6994 6551 4 1575 686 101 36 18 chrX 129813171 129813282 -36837014 + Lx2B LINE L1 6310 6422 -578 4 1575 505 312 54 19 chrX 129813440 129813698 -36836598 - L1_Rod LINE L1 -33 5814 5548 4 1575 497 310 39 44 chrX 129813713 129814115 -36836181 + L1_Rod LINE L1 5152 5590 -574 4 1575 352 267 42 17 chrX 129814128 129814246 -36836050 + Charlie8 DNA MER1_type 71 191 -2237 4 1575 1144 284 99 16 chrX 129814906 129815332 -36834964 + Lx8 LINE L1 7008 7468 -5 4 1575 4067 69 0 0 chrX 129815395 129815918 -36834378 - L1_Mus2 LINE L1 -401 6165 5643 4 1575 2964 73 5 46 chrX 129815929 129816346 -36833950 + L1_Mus2 LINE L1 6166 6565 -1 4 1575 342 295 32 136 chrX 129816371 129816395 -36833901 + B3A SINE B2 2 23 -175 4 1575 4393 205 21 7 chrX 129816395 129817256 -36833040 + Lx5 LINE L1 6175 7047 -3 4 1575 342 295 32 136 chrX 129817256 129817451 -36832845 + B3A SINE B2 24 198 0 4 1575 423 0 0 0 chrX 129817496 129817543 -36832753 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 1575 963 0 0 0 chrX 129818661 129818768 -36831528 + (GAA)n Simple_repeat Simple_repeat 2 108 0 4 1575 471 138 0 0 chrX 129819099 129819186 -36831110 + (CA)n Simple_repeat Simple_repeat 2 88 0 4 1575 188 387 0 19 chrX 129820346 129820454 -36829842 + L3 LINE CR1 3811 3916 -573 4 1575 504 339 81 26 chrX 129821270 129821700 -36828596 + L1M4 LINE L1 67 520 -6022 4 1575 751 216 47 0 chrX 129821696 129821896 -36828400 + Lx8 LINE L1 5633 5877 -1596 4 1575 2821 168 21 65 chrX 129821921 129822393 -36827903 + RLTR20A LTR ERVK 1 448 -93 4 1575 360 0 0 0 chrX 129822393 129822433 -36827863 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1575 2821 168 21 65 chrX 129822433 129822526 -36827770 + RLTR20A LTR ERVK 449 540 -1 4 1575 291 249 134 27 chrX 129822535 129822721 -36827575 + L1M4 LINE L1 5665 5870 -314 4 1575 1484 203 9 26 chrX 129822742 129823086 -36827210 + Lx9 LINE L1 7180 7517 -127 4 1575 320 162 38 0 chrX 129823089 129823194 -36827102 + (TA)n Simple_repeat Simple_repeat 1 109 0 4 1575 486 233 0 15 chrX 129823239 129823374 -36826922 - Lx6 LINE L1 -20 7440 7308 4 1575 2064 181 19 5 chrX 129823391 129823812 -36826484 + L1_Mur2 LINE L1 2658 3084 -2793 4 1575 881 51 0 17 chrX 129823812 129823829 -36826467 + (GAA)n Simple_repeat Simple_repeat 2 18 0 4 1575 1526 6 11 0 chrX 129823829 129824007 -36826289 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 4 1575 881 51 0 17 chrX 129824007 129824109 -36826187 + (GAA)n Simple_repeat Simple_repeat 1 101 0 4 1575 923 112 12 18 chrX 129824109 129824272 -36826024 + L1_Mur2 LINE L1 3046 3207 -2670 4 1575 5320 142 27 2 chrX 129824265 129825192 -36825104 + L1_Mur2 LINE L1 3626 4575 -1302 4 1575 28 0 0 0 chrX 129825326 129825354 -36824942 + AT_rich Low_complexity Low_complexity 1 28 0 4 1575 383 57 0 0 chrX 129825359 129825412 -36824884 + B1_Mur3 SINE Alu 92 144 -5 4 1575 297 0 0 0 chrX 129825423 129825456 -36824840 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 1575 1069 114 17 0 chrX 129825456 129825632 -36824664 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 4 1575 283 362 11 0 chrX 129826305 129826482 -36823814 - L1M5 LINE L1 -394 5730 5552 4 1575 874 177 10 45 chrX 129826719 129826920 -36823376 - Lx2B LINE L1 -1 6999 6806 4 1575 462 143 0 0 chrX 129826961 129827038 -36823258 + (TA)n Simple_repeat Simple_repeat 1 77 0 4 1575 3659 216 52 20 chrX 129827205 129828069 -36822227 - Lx2B LINE L1 -5 6995 6104 4 1575 187 265 61 0 chrX 129828840 129828889 -36821407 + L3 LINE CR1 3387 3438 -1051 4 1575 317 319 108 6 chrX 129829048 129829206 -36821090 + L3 LINE CR1 3431 3604 -885 4 1575 231 194 87 10 chrX 129829650 129829754 -36820542 + (TTATA)n Simple_repeat Simple_repeat 3 114 0 4 1575 319 74 0 53 chrX 129829867 129829924 -36820372 + L1_Mus2 LINE L1 6513 6566 0 4 1575 180 135 0 0 chrX 129830076 129830113 -36820183 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1575 282 106 0 0 chrX 129830181 129830228 -36820068 + (ATTG)n Simple_repeat Simple_repeat 2 48 0 4 1575 352 297 0 181 chrX 129830231 129830375 -36819921 - RSINE1 SINE B4 0 165 48 4 1575 242 120 20 0 chrX 129830429 129830436 -36819860 + (TA)n Simple_repeat Simple_repeat 2 8 0 4 1575 543 31 0 0 chrX 129830436 129830501 -36819795 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1575 242 120 20 0 chrX 129830501 129830543 -36819753 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 1575 24 32 0 0 chrX 129830577 129830608 -36819688 + AT_rich Low_complexity Low_complexity 1 31 0 4 1575 767 210 0 0 chrX 129830772 129830915 -36819381 + B1_Mur4 SINE Alu 1 143 -7 4 1575 33 25 0 0 chrX 129830919 129830959 -36819337 + AT_rich Low_complexity Low_complexity 1 40 0 4 1575 848 254 6 6 chrX 129831632 129831814 -36818482 + MTEb LTR MaLR 1 182 -197 4 1575 654 126 0 0 chrX 129831814 129831917 -36818379 + (GGAA)n Simple_repeat Simple_repeat 3 105 0 4 1575 405 0 0 0 chrX 129831975 129832020 -36818276 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1575 22 0 0 0 chrX 129832219 129832241 -36818055 + AT_rich Low_complexity Low_complexity 1 22 0 4 1575 25 0 0 0 chrX 129833324 129833349 -36816947 + AT_rich Low_complexity Low_complexity 1 25 0 4 1575 714 223 29 0 chrX 129833616 129833822 -36816474 - MYSERV-int LTR ERVK -53 6497 6286 4 1575 1966 114 24 3 chrX 129833849 129834147 -36816149 + Lx3_Mus LINE L1 6695 6998 -11 4 1575 1609 146 119 10 chrX 129834164 129834475 -36815821 - IAPLTR4 LTR ERVK 0 345 1 5 1575 181 206 0 0 chrX 129834597 129834631 -36815665 + MIR3 SINE MIR 153 186 -22 5 1575 26 30 0 0 chrX 129835292 129835325 -36814971 + AT_rich Low_complexity Low_complexity 1 33 0 5 1575 232 273 0 143 chrX 129835556 129835633 -36814663 + B1F SINE Alu 26 91 -58 5 1575 1643 202 73 6 chrX 129836324 129836668 -36813628 + ORR1B2 LTR MaLR 1 367 0 5 1575 477 0 0 0 chrX 129837893 129837946 -36812350 + (TC)n Simple_repeat Simple_repeat 1 53 0 5 1575 2622 210 62 15 chrX 129837962 129838493 -36811803 - Lx5 LINE L1 0 7050 6495 5 1575 1514 216 146 8 chrX 129838493 129838876 -36811420 + Lx5 LINE L1 5794 6229 -821 5 1575 889 303 120 62 chrX 129838882 129839885 -36810411 - L1MC3 LINE L1 -1 7784 6724 5 1575 207 0 0 0 chrX 129840605 129840628 -36809668 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1575 1138 62 0 0 chrX 129840633 129840779 -36809517 + B1_Mus2 SINE Alu 2 147 0 5 1575 700 247 76 57 chrX 129841206 129841499 -36808797 - Lx7 LINE L1 -17 7679 7378 5 1575 798 11 0 0 chrX 129841499 129841590 -36808706 + (TG)n Simple_repeat Simple_repeat 2 92 0 5 1575 700 247 76 57 chrX 129841590 129841610 -36808686 - Lx7 LINE L1 -319 7377 7360 5 1575 247 98 39 19 chrX 129841612 129841664 -36808632 + A-rich Low_complexity Low_complexity 3 55 0 5 1575 13033 61 8 1 chrX 129841721 129843425 -36806871 - L1Md_F2 LINE L1 -604 5279 3564 5 1575 2368 60 0 0 chrX 129843423 129843722 -36806574 + L1Md_F2 LINE L1 5287 5585 -298 5 1575 7590 67 1 10 chrX 129843723 129844716 -36805580 + L1Md_F2 LINE L1 5587 6570 -12 5 1575 1065 261 86 23 chrX 129844746 129845048 -36805248 - Lx7 LINE L1 -444 7252 6932 5 1575 4294 113 18 0 chrX 129845022 129845640 -36804656 + Lx3_Mus LINE L1 6282 6910 -99 5 1575 208 143 0 0 chrX 129846024 129846059 -36804237 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1575 741 12 0 0 chrX 129846137 129846223 -36804073 + (CA)n Simple_repeat Simple_repeat 2 87 0 5 1575 1532 225 26 41 chrX 129846652 129846991 -36803305 + MTD LTR MaLR 1 334 -85 5 1575 9628 153 47 11 chrX 129847945 129850674 -36799622 + L1VL2 LINE L1 452 3284 -2599 5 1575 501 17 0 0 chrX 129850795 129850853 -36799443 + (TGGA)n Simple_repeat Simple_repeat 3 60 0 5 1575 894 323 58 81 chrX 129850863 129851298 -36798998 - MLT2B1 LTR ERVL -35 485 61 5 1575 2057 57 25 0 chrX 129851586 129851868 -36798428 - L1_Mus3 LINE L1 -7 6631 6343 5 1575 723 148 0 8 chrX 129851868 129852011 -36798285 + L1_Mus3 LINE L1 6244 6389 -193 5 1575 431 267 62 62 chrX 129852366 129852377 -36797919 - B3 SINE B2 -5 211 201 5 1575 553 33 54 0 chrX 129852377 129852469 -36797827 + (TA)n Simple_repeat Simple_repeat 2 98 0 5 1575 431 267 62 62 chrX 129852469 129852500 -36797796 - B3 SINE B2 -16 200 174 5 1575 213 94 0 0 chrX 129852500 129852532 -36797764 + (CATA)n Simple_repeat Simple_repeat 1 32 0 5 1575 431 267 62 62 chrX 129852532 129852648 -36797648 - B3 SINE B2 -43 173 53 5 1575 270 0 0 0 chrX 129852678 129852708 -36797588 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 5 1575 4178 216 44 22 chrX 129852708 129853711 -36796585 - Lx4B LINE L1 -31 6969 5923 5 1575 600 14 0 0 chrX 129853711 129853780 -36796516 + (TA)n Simple_repeat Simple_repeat 1 69 0 5 1575 4178 208 40 22 chrX 129853780 129853884 -36796412 - Lx4B LINE L1 -1125 5933 5817 5 1575 3059 156 4 8 chrX 129853878 129854401 -36795895 - Lx4B LINE L1 -445 5432 4912 5 1575 3890 142 36 1 chrX 129854380 129855078 -36795218 - Lx4B LINE L1 -2600 3277 2556 5 1575 660 256 67 54 chrX 129855710 129855950 -36794346 - RMER15 LTR ERVL -2 573 331 5 1575 756 33 0 0 chrX 129856087 129856178 -36794118 + (TC)n Simple_repeat Simple_repeat 1 91 0 5 1575 373 331 209 0 chrX 129856514 129856701 -36793595 - MTEb LTR MaLR 0 379 154 5 1575 413 227 26 52 chrX 129856747 129856863 -36793433 - MTE2b-int LTR MaLR -1120 460 348 5 1575 865 302 63 10 chrX 129857048 129857331 -36792965 - MTE2b-int LTR MaLR -1241 339 11 5 1575 1482 297 22 0 chrX 129857349 129857716 -36792580 - MTE2b LTR MaLR -2 377 3 5 1575 217 250 0 0 chrX 129858418 129858458 -36791838 - MER5A DNA MER1_type -1 188 149 5 1575 719 284 29 24 chrX 129858461 129858667 -36791629 + MER58A DNA MER1_type 3 209 -15 5 1575 239 343 29 57 chrX 129858722 129858827 -36791469 - MER5A DNA MER1_type -62 127 26 5 1575 258 355 104 8 chrX 129858877 129859002 -36791294 + MER5B DNA MER1_type 10 146 -32 5 1575 723 231 14 0 chrX 129859002 129859149 -36791147 + B1_Mur4 SINE Alu 1 149 -1 5 1575 212 0 36 0 chrX 129859702 129859730 -36790566 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 5 1575 808 260 108 32 chrX 129860341 129860607 -36789689 - Lx5 LINE L1 -753 6707 6205 5 1575 831 250 76 27 chrX 129860609 129860872 -36789424 + Lx6 LINE L1 5886 6161 -1299 5 1575 21 36 0 0 chrX 129861035 129861063 -36789233 + AT_rich Low_complexity Low_complexity 1 28 0 5 1575 208 333 122 28 chrX 129861359 129861564 -36788732 - L4 LINE RTE -220 1809 1582 5 1575 468 0 0 0 chrX 129861564 129861616 -36788680 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1575 285 335 132 13 chrX 129863073 129863224 -36787072 - L4 LINE RTE -1474 555 387 5 1575 207 0 0 0 chrX 129863482 129863505 -36786791 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 1575 1150 48 7 0 chrX 129863505 129863644 -36786652 - B1_Mm SINE Alu -6 141 2 5 1575 261 189 53 38 chrX 129864295 129864427 -36785869 + (TTATA)n Simple_repeat Simple_repeat 4 137 0 5 1575 348 24 0 0 chrX 129864740 129864781 -36785515 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1575 369 109 0 0 chrX 129866324 129866379 -36783917 + (T)n Simple_repeat Simple_repeat 1 55 0 5 1575 4492 47 2 0 chrX 129866513 129867066 -36783230 - L1Md_F2 LINE L1 -2 6580 6027 5 1575 4088 259 79 28 chrX 129868646 129868815 -36781481 - Charlie12 DNA MER1_type -3 2870 2674 5 1575 718 229 147 16 chrX 129868815 129869006 -36781290 + B3 SINE B2 1 216 0 5 1575 4088 259 79 28 chrX 129869006 129870239 -36780057 - Charlie12 DNA MER1_type -200 2673 1397 5 1575 2855 195 180 16 chrX 129870251 129870421 -36779875 + Lx2B LINE L1 5090 5258 -882 5 1575 459 0 0 0 chrX 129870421 129870472 -36779824 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1575 5381 141 46 15 chrX 129870472 129871400 -36778896 + RMER17B LTR ERVK 1 957 -1 5 1575 351 0 0 0 chrX 129871400 129871439 -36778857 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1575 5479 205 107 14 chrX 129871439 129872933 -36777363 + Lx2B LINE L1 5240 6916 -84 5 1575 1698 195 8 25 chrX 129872933 129873296 -36777000 - Lx4B LINE L1 -915 6143 5787 5 1575 4313 60 0 16 chrX 129873315 129873875 -36776421 - L1Md_F2 LINE L1 -2 6580 6030 5 1575 37881 30 0 0 chrX 129873876 129880508 -36769788 - L1Md_T LINE L1 0 6585 1 5 1575 34552 73 4 2 chrX 129880509 129886168 -36764128 - L1Md_F2 LINE L1 -539 6043 373 5 1575 13450 152 22 28 chrX 129886170 129888768 -36761528 - Lx4B LINE L1 -77 5800 3218 5 1575 385 231 67 37 chrX 129888773 129888908 -36761388 - Charlie12 DNA MER1_type -2109 764 626 5 1575 508 327 63 45 chrX 129889017 129889238 -36761058 - Charlie12 DNA MER1_type -2247 626 402 5 1575 501 277 107 0 chrX 129889259 129889418 -36760878 + RMER30 DNA MER1_type 20 195 -7 5 1575 188 239 0 0 chrX 129889585 129889631 -36760665 + L3b LINE CR1 436 481 -1 5 1575 830 243 48 5 chrX 129890109 129890316 -36759980 - B3 SINE B2 0 216 1 5 1575 213 368 69 44 chrX 129890981 129891189 -36759107 - MIRc SINE MIR -30 238 25 5 196 2922 191 99 19 chrX 129892162 129892853 -36757443 - Lx4A LINE L1 0 7000 6266 5 1576 1180 231 21 18 chrX 129894030 129894312 -36755984 + Lx4B LINE L1 6752 7034 -24 5 1576 207 0 0 0 chrX 129894312 129894335 -36755961 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 5 1576 24 53 0 0 chrX 129894439 129894477 -36755819 + AT_rich Low_complexity Low_complexity 1 38 0 5 1576 1982 226 46 5 chrX 129895074 129895466 -36754830 - MTD LTR MaLR -8 411 4 5 1576 233 104 56 69 chrX 129895758 129895830 -36754466 + (TTAA)n Simple_repeat Simple_repeat 2 72 0 5 1576 824 203 24 60 chrX 129896109 129896361 -36753935 - Lx9 LINE L1 -1 7643 7401 5 1576 750 243 43 10 chrX 129896360 129896568 -36753728 + Lx9 LINE L1 7210 7424 -220 5 1576 3420 298 70 32 chrX 129896682 129897576 -36752720 - Lx8 LINE L1 -2 7471 6511 5 1576 243 0 0 0 chrX 129897576 129897603 -36752693 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1576 1147 82 0 0 chrX 129897613 129897760 -36752536 - B1_Mus1 SINE Alu 0 148 2 5 1576 3420 298 70 32 chrX 129897760 129898053 -36752243 - Lx8 LINE L1 -963 6510 6227 5 1576 22 0 0 0 chrX 129898122 129898144 -36752152 + AT_rich Low_complexity Low_complexity 1 22 0 5 1576 655 195 41 91 chrX 129898150 129898268 -36752028 - L1_Rod LINE L1 -6460 712 606 5 1576 279 0 0 0 chrX 129898268 129898299 -36751997 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 5 1576 998 90 8 0 chrX 129898299 129898432 -36751864 - B1_Mus2 SINE Alu -13 134 1 5 1576 655 195 41 91 chrX 129898432 129898532 -36751764 - L1_Rod LINE L1 -6567 605 505 5 1576 21 0 0 0 chrX 129898616 129898637 -36751659 + AT_rich Low_complexity Low_complexity 1 21 0 5 1576 37 0 0 0 chrX 129898970 129899007 -36751289 + AT_rich Low_complexity Low_complexity 1 37 0 5 1576 1278 224 62 26 chrX 129899935 129900357 -36749939 + L1_Mur2 LINE L1 895 1268 -5818 5 1576 1842 159 37 11 chrX 129900357 129900707 -36749589 - RLTR15 LTR ERVK 0 359 1 5 1576 1278 186 0 55 chrX 129900707 129900811 -36749485 + L1_Mur2 LINE L1 1269 1370 -4507 5 1576 4648 82 8 3 chrX 129900815 129901460 -36748836 - L1_Mus3 LINE L1 -72 6566 5919 5 1576 307 102 0 0 chrX 129901459 129901508 -36748788 - L1_Mur1 LINE L1 -581 5305 5257 5 1576 1019 75 0 8 chrX 129901508 129901642 -36748654 + Lx3_Mus LINE L1 6742 6874 -135 5 1576 8619 102 60 7 chrX 129901642 129903067 -36747229 + Lx3_Mus LINE L1 5507 7001 -8 5 1576 6746 131 30 11 chrX 129903084 129904639 -36745657 + Lx LINE L1 5065 6642 -12 5 1576 5851 192 51 30 chrX 129904764 129905982 -36744314 + Lx5 LINE L1 5827 7045 -5 5 1576 2436 223 187 11 chrX 129905989 129907137 -36743159 + Lx6 LINE L1 4989 6367 -683 5 1576 1648 267 48 46 chrX 129907129 129907732 -36742564 + Lx6 LINE L1 6479 7457 -3 5 1576 336 62 0 45 chrX 129908067 129908134 -36742162 + (TTTG)n Simple_repeat Simple_repeat 1 64 0 5 1576 743 55 0 60 chrX 129908152 129908268 -36742028 + L1_Mus2 LINE L1 6458 6566 0 5 1576 352 345 162 13 chrX 129908624 129908859 -36741437 - L3 LINE CR1 -45 4444 4175 5 1576 1172 283 19 19 chrX 129909490 129909814 -36740482 - Lx6 LINE L1 -30 7430 7107 5 1576 7158 80 14 4 chrX 129909819 129910790 -36739506 - L1Md_F2 LINE L1 0 6582 5602 5 1576 393 80 0 0 chrX 129910750 129910800 -36739496 + L1Md_F2 LINE L1 5592 5641 -943 5 1576 845 333 16 8 chrX 129910845 129911090 -36739206 - 7SK RNA RNA -75 256 10 5 1576 1906 333 103 19 chrX 129911187 129912161 -36738135 + Lx8 LINE L1 6127 7181 -292 5 1576 388 0 0 0 chrX 129912745 129912797 -36737499 + L1Md_T LINE L1 6531 6582 0 5 1576 22 0 0 0 chrX 129913398 129913420 -36736876 + AT_rich Low_complexity Low_complexity 1 22 0 5 1576 324 133 0 0 chrX 129914233 129914293 -36736003 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 1576 252 368 0 64 chrX 129914309 129914434 -36735862 + MER5B DNA MER1_type 61 177 -1 5 1576 182 250 96 0 chrX 129915327 129915379 -36734917 - MIR3 SINE MIR -147 61 5 6 1576 263 293 13 0 chrX 129915473 129915548 -36734748 + ID4 SINE ID 5 80 -3 6 1576 247 220 91 25 chrX 129915680 129915801 -36734495 - Lx9 LINE L1 -4 7640 7512 6 1576 213 270 43 87 chrX 129916110 129916248 -36734048 + B2_Mm1t SINE B2 50 181 -12 6 1576 810 328 71 25 chrX 129916696 129917116 -36733180 - MLT2B4 LTR ERVL -48 416 6 6 1576 456 291 57 29 chrX 129918522 129918731 -36731565 + L1M5 LINE L1 5450 5664 -460 6 1576 270 0 0 0 chrX 129918842 129918872 -36731424 + (TA)n Simple_repeat Simple_repeat 2 31 0 6 1576 21 110 0 0 chrX 129919079 129919170 -36731126 + AT_rich Low_complexity Low_complexity 1 91 0 6 1576 369 0 0 0 chrX 129919869 129919910 -36730386 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1576 682 343 46 63 chrX 129920091 129920502 -36729794 - MLT1I LTR MaLR -2 409 6 6 1576 24 0 0 0 chrX 129922110 129922134 -36728162 + AT_rich Low_complexity Low_complexity 1 24 0 6 1576 266 351 10 62 chrX 129923342 129923471 -36726825 + MIR SINE MIR 8 130 -138 6 1576 425 338 15 8 chrX 129923510 129923644 -36726652 + ID_B1 SINE B4 82 216 -8 6 1576 204 91 61 0 chrX 129924608 129924641 -36725655 + A-rich Low_complexity Low_complexity 2 36 0 6 1576 1532 70 0 18 chrX 129924658 129924878 -36725418 - L1Md_F2 LINE L1 -3 6579 6364 6 1576 865 72 160 0 chrX 129924886 129925011 -36725285 + B1_Mm SINE Alu 1 145 -2 6 1576 853 306 94 99 chrX 129925032 129925238 -36725058 - Lx8 LINE L1 -43 7430 7234 6 1576 462 224 8 8 chrX 129925238 129925355 -36724941 + Lx4A LINE L1 6942 7058 0 6 1576 853 306 94 99 chrX 129925355 129925693 -36724603 - Lx8 LINE L1 -240 7233 6889 6 1576 1653 109 4 40 chrX 129926024 129926301 -36723995 - L1_Mus3 LINE L1 -3 6635 6369 6 1576 4974 69 0 5 chrX 129926329 129926983 -36723313 - L1_Mus1 LINE L1 0 6567 5917 6 1576 5098 80 99 0 chrX 129926983 129926996 -36723300 - L1_Mus3 LINE L1 -255 6383 6371 6 1576 252 0 0 0 chrX 129926996 129927024 -36723272 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 1576 13034 110 38 4 chrX 129927024 129929473 -36720823 - L1_Mus3 LINE L1 -268 6370 3836 6 1576 987 334 18 9 chrX 129929473 129929799 -36720497 + MLT1A0 LTR MaLR 37 365 0 6 1576 251 365 98 24 chrX 129930456 129930661 -36719635 + L1MEg LINE L1 1 220 -5864 6 1576 1134 207 9 0 chrX 129930966 129931188 -36719108 + URR1B DNA MER1_type 2 225 0 6 1576 246 81 0 0 chrX 129931443 129931480 -36718816 + (CAA)n Simple_repeat Simple_repeat 3 39 0 6 1576 428 117 0 13 chrX 129931712 129931790 -36718506 + (TG)n Simple_repeat Simple_repeat 1 77 0 6 1576 526 286 84 79 chrX 129931920 129932323 -36717973 + L1MEg LINE L1 1207 1611 -4473 6 1576 253 269 0 0 chrX 129932385 129932437 -36717859 - Lx8 LINE L1 -494 6979 6928 6 1576 2473 55 15 6 chrX 129932542 129932869 -36717427 + L1Md_F2 LINE L1 6252 6581 -1 6 1576 2391 189 92 31 chrX 129932946 129933530 -36716766 - Lx9 LINE L1 -1 7643 7024 6 1576 209 176 19 19 chrX 129933552 129933604 -36716692 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1576 505 265 0 0 chrX 129934780 129934882 -36715414 + B1_Mur1 SINE Alu 28 129 -20 6 1576 2044 151 33 0 chrX 129934899 129935231 -36715065 + Lx3C LINE L1 6623 6965 -11 6 1576 597 64 0 0 chrX 129935231 129935309 -36714987 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 6 1576 2606 41 0 0 chrX 129935332 129935648 -36714648 - L1Md_F2 LINE L1 -71 6511 6196 6 1576 846 40 0 0 chrX 129935654 129935754 -36714542 + L1Md_F2 LINE L1 6097 6196 -386 6 1576 612 182 231 0 chrX 129935754 129935897 -36714399 - URR1B DNA MER1_type -49 176 1 6 1576 770 264 134 58 chrX 129936033 129936496 -36713800 + L1MD3 LINE L1 7484 7981 -14 6 1576 461 250 147 73 chrX 129938211 129938407 -36711889 + MIRb SINE MIR 1 204 -64 6 1576 394 132 26 0 chrX 129938605 129938681 -36711615 + (TA)n Simple_repeat Simple_repeat 2 79 0 6 1576 306 0 0 0 chrX 129939065 129939099 -36711197 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1576 214 380 0 0 chrX 129939246 129939317 -36710979 + AmnSINE1 SINE SINE 9 79 -496 6 1576 445 277 182 16 chrX 129939808 129939995 -36710301 + MIR SINE MIR 24 241 -21 6 1576 1095 323 22 10 chrX 129940491 129940891 -36709405 + Lx8 LINE L1 6370 6774 -699 6 1576 207 239 82 27 chrX 129942178 129942251 -36708045 - MIR SINE MIR -105 157 81 6 1576 25 31 0 0 chrX 129943325 129943357 -36706939 + AT_rich Low_complexity Low_complexity 1 32 0 6 1576 21 0 0 0 chrX 129943853 129943874 -36706422 + AT_rich Low_complexity Low_complexity 1 21 0 6 1576 210 315 19 115 chrX 129944070 129944174 -36706122 + PB1D10 SINE Alu 14 107 -10 6 1576 302 342 153 44 chrX 129945396 129945781 -36704515 + L3 LINE CR1 3465 3891 -598 6 1576 215 317 19 9 chrX 129945993 129946098 -36704198 + A-rich Low_complexity Low_complexity 4 109 0 6 1576 5678 225 56 50 chrX 129946375 129947458 -36702838 + Lx7 LINE L1 6147 7248 -448 6 1576 1099 62 7 33 chrX 129947458 129947609 -36702687 - B1_Mm SINE Alu 0 147 1 6 1576 5678 225 56 50 chrX 129947609 129948066 -36702230 + Lx7 LINE L1 7249 7696 0 6 1576 624 14 0 0 chrX 129948880 129948953 -36701343 + (GA)n Simple_repeat Simple_repeat 2 74 0 6 1576 466 267 58 58 chrX 129949540 129949679 -36700617 + RSINE1 SINE B4 1 139 -26 6 1576 329 0 0 24 chrX 129949687 129949729 -36700567 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1576 200 189 0 0 chrX 129949730 129949767 -36700529 + GA-rich Low_complexity Low_complexity 2 38 0 6 1576 33944 82 14 2 chrX 129950606 129956557 -36693739 + L1Md_F2 LINE L1 575 6636 -2 6 1576 1997 267 40 0 chrX 129956788 129957283 -36693013 - Lx6 LINE L1 -6 7454 6940 6 1576 21 0 0 0 chrX 129957547 129957568 -36692728 + AT_rich Low_complexity Low_complexity 1 21 0 6 1576 385 306 62 10 chrX 129957568 129957776 -36692520 + L1M5 LINE L1 5605 5823 -301 6 1576 219 103 0 0 chrX 129958083 129958122 -36692174 + (A)n Simple_repeat Simple_repeat 1 39 0 6 1576 418 339 89 36 chrX 129958921 129959279 -36691017 - MLT1A1 LTR MaLR -11 397 21 6 1576 2046 245 48 36 chrX 129959759 129960328 -36689968 + Lx9 LINE L1 6947 7516 -128 6 1576 234 0 0 0 chrX 129960328 129960354 -36689942 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 1576 2046 245 48 36 chrX 129960354 129960453 -36689843 + Lx9 LINE L1 7517 7623 -21 6 1576 27 0 0 0 chrX 129960465 129960492 -36689804 + AT_rich Low_complexity Low_complexity 1 27 0 6 1576 1211 150 0 0 chrX 129960590 129960783 -36689513 - B2_Mm2 SINE B2 -1 194 2 6 1576 7351 72 17 3 chrX 129960834 129962141 -36688155 - L1Md_F2 LINE L1 -12 6570 5246 6 1576 5870 76 0 5 chrX 129962141 129962917 -36687379 - L1Md_F2 LINE L1 -11 6571 5800 6 1576 37898 30 0 1 chrX 129962921 129969501 -36680795 - L1Md_T LINE L1 0 6585 1 6 1576 28651 84 55 59 chrX 129969491 129971905 -36678391 - L1Md_F LINE L1 -56 5827 3425 6 1576 1870 43 0 0 chrX 129971905 129972136 -36678160 - L1Md_F2 LINE L1 -12 6570 6340 6 1576 28651 94 57 44 chrX 129972136 129975152 -36675144 - L1Md_F LINE L1 -2459 3424 366 6 1576 26 30 0 0 chrX 129975157 129975190 -36675106 + AT_rich Low_complexity Low_complexity 1 33 0 6 1576 298 191 0 43 chrX 129975625 129975718 -36674578 + CT-rich Low_complexity Low_complexity 1 89 0 6 1576 2819 110 52 19 chrX 129977106 129977570 -36672726 - Lx LINE L1 -6 6648 6170 6 1576 630 146 0 0 chrX 129977570 129977673 -36672623 + L1_Mur2 LINE L1 5283 5385 -492 6 1576 346 311 52 58 chrX 129977673 129977847 -36672449 + MLT1E1A LTR MaLR 500 672 -8 6 1576 261 310 137 19 chrX 129977913 129978074 -36672222 + MIRc SINE MIR 4 183 -85 6 1576 492 321 25 56 chrX 129978169 129978367 -36671929 - MIRb SINE MIR -73 195 4 6 1576 571 268 0 0 chrX 129980071 129980198 -36670098 - B1F SINE Alu -1 148 22 6 1576 4384 24 2 0 chrX 129980467 129980976 -36669320 - L1Md_A LINE L1 -1 6581 6072 6 1576 891 289 54 36 chrX 129980979 129981620 -36668676 - Lx9 LINE L1 -1032 6612 5816 6 1576 556 326 53 37 chrX 129981963 129982208 -36668088 + MER102a DNA MER1_type 81 329 -1 6 1576 334 282 56 84 chrX 129983345 129983523 -36666773 + L1MC LINE L1 5622 5794 -2088 6 1576 227 269 0 0 chrX 129983920 129983972 -36666324 - L2 LINE L2 -1421 1998 1947 6 1576 342 140 428 12 chrX 129985783 129985956 -36664340 - Lx9 LINE L1 0 7644 7400 6 1576 1247 242 102 34 chrX 129985948 129986358 -36663938 + Lx9 LINE L1 6990 7427 -217 6 1576 4341 186 26 5 chrX 129986442 129987261 -36663035 - Lx5 LINE L1 0 7050 6215 6 1576 1252 313 80 39 chrX 129987271 129987837 -36662459 - L1_Rod LINE L1 -30 5817 5220 6 1576 237 33 0 0 chrX 129987837 129987867 -36662429 + (TTG)n Simple_repeat Simple_repeat 2 31 0 6 1576 1252 321 69 44 chrX 129987867 129988456 -36661840 - L1_Rod LINE L1 -923 5220 4689 6 1576 406 319 0 89 chrX 129988500 129988624 -36661672 + B3A SINE B2 8 120 -78 6 1576 1276 221 136 41 chrX 129988633 129988841 -36661455 - Lx9 LINE L1 -473 7171 6957 6 1576 450 0 0 0 chrX 129988841 129988891 -36661405 + (TC)n Simple_repeat Simple_repeat 2 51 0 6 1576 279 0 0 0 chrX 129988891 129988921 -36661375 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1576 414 0 0 0 chrX 129988930 129988976 -36661320 + (TAGA)n Simple_repeat Simple_repeat 2 47 0 6 1576 1276 221 136 41 chrX 129988976 129989191 -36661105 - Lx9 LINE L1 -698 6946 6698 6 1576 1308 231 50 47 chrX 129989181 129989562 -36660734 + Lx9 LINE L1 7263 7644 0 6 1576 1665 177 28 12 chrX 129990390 129990716 -36659580 + Lx4B LINE L1 6674 7004 -54 6 1576 420 324 73 25 chrX 129991511 129991813 -36658483 + L1ME1 LINE L1 5135 5456 -903 6 1576 2780 45 0 0 chrX 129991847 129992181 -36658115 + L1Md_F2 LINE L1 5253 5586 -297 6 1576 8022 45 1 4 chrX 129992181 129993176 -36657120 + L1Md_F2 LINE L1 5587 6578 -4 6 1576 339 313 187 32 chrX 129993261 129993515 -36656781 + L1ME1 LINE L1 5567 5886 -293 6 1576 391 312 0 9 chrX 129993515 129993625 -36656671 + PB1D10 SINE Alu 3 111 -6 6 1576 339 313 187 32 chrX 129993625 129993845 -36656451 + L1ME1 LINE L1 5887 6115 -64 6 1576 1030 190 19 23 chrX 129996834 129997049 -36653247 + B3 SINE B2 2 215 -1 6 1576 236 326 193 20 chrX 129997201 129997351 -36652945 - L2b LINE L2 -1 3374 3199 6 1576 300 53 0 0 chrX 129997451 129997489 -36652807 + (CAGAGA)n Simple_repeat Simple_repeat 5 42 0 6 1576 338 293 70 39 chrX 129997671 129997799 -36652497 - L2c LINE L2 -13 3374 3243 7 1576 891 95 0 8 chrX 130000250 130000389 -36649907 - Lx2 LINE L1 -191 6806 6675 1 1576 23 33 0 0 chrX 130000390 130000420 -36649876 + AT_rich Low_complexity Low_complexity 1 30 0 2 1576 21 82 0 0 chrX 130000565 130000614 -36649682 + AT_rich Low_complexity Low_complexity 1 49 0 3 1576 334 270 125 76 chrX 130001053 130001217 -36649079 + MLT1G3 LTR MaLR 15 192 -403 4 1576 3756 116 13 0 chrX 130001665 130002216 -36648080 + Lx LINE L1 6090 6647 -7 5 1576 26 64 0 0 chrX 130002217 130002264 -36648032 + AT_rich Low_complexity Low_complexity 1 47 0 6 1576 3989 90 4 2 chrX 130002805 130003353 -36646943 - L1Md_F2 LINE L1 -3 6579 6031 7 1576 20206 106 9 14 chrX 130003448 130006598 -36643698 + L1Md_F LINE L1 204 3340 -2543 8 1576 194 0 39 0 chrX 130006598 130006624 -36643672 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1576 20206 80 3 0 chrX 130006624 130007413 -36642883 + L1Md_F LINE L1 3341 4132 -1751 8 1576 2388 104 53 3 chrX 130007413 130007751 -36642545 + RLTR10D LTR ERVK 1 355 -4 1 1576 910 110 10 152 chrX 130007758 130007962 -36642334 + IAP-d-int LTR ERVK 3 177 -6365 1 1576 756 183 26 0 chrX 130007956 130008109 -36642187 + IAP-d-int LTR ERVK 347 503 -6039 1 1576 1910 204 0 13 chrX 130008109 130008492 -36641804 + IAP-d-int LTR ERVK 5007 5384 -1158 1 1576 5582 116 0 40 chrX 130008474 130009380 -36640916 + IAP-d-int LTR ERVK 5673 6542 0 1 1576 2323 102 54 0 chrX 130009385 130009720 -36640576 + RLTR10D LTR ERVK 7 359 0 1 1576 10400 72 8 1 chrX 130009720 130011167 -36639129 + L1Md_F2 LINE L1 4129 5585 -298 1 1576 6314 65 106 31 chrX 130011168 130011484 -36638812 + L1Md_F2 LINE L1 5587 5900 -682 1 1576 2674 106 150 0 chrX 130011484 130011917 -36638379 + RLTR44C LTR ERVK 5 502 0 1 1576 6314 65 106 31 chrX 130011917 130012527 -36637769 + L1Md_F2 LINE L1 5901 6582 0 1 1576 30 69 0 0 chrX 130012765 130012823 -36637473 + AT_rich Low_complexity Low_complexity 1 58 0 1 1576 279 0 0 0 chrX 130012971 130013002 -36637294 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1576 1054 66 7 0 chrX 130013002 130013138 -36637158 - B1_Mm SINE Alu -9 138 2 1 1576 24 53 0 0 chrX 130013484 130013522 -36636774 + AT_rich Low_complexity Low_complexity 1 38 0 1 1576 723 55 0 0 chrX 130014478 130014569 -36635727 - B1_Mm SINE Alu 0 147 57 1 1576 2167 59 43 7 chrX 130014569 130014874 -36635422 + L1Md_F2 LINE L1 6212 6527 -55 1 1576 2518 36 10 0 chrX 130014874 130015179 -36635117 + L1Md_F3 LINE L1 6265 6572 -12 1 1576 30 0 0 0 chrX 130015179 130015209 -36635087 + AT_rich Low_complexity Low_complexity 1 30 0 2 1576 470 109 0 0 chrX 130015209 130015273 -36635023 - B1_Mus2 SINE Alu -83 64 1 2 1576 366 287 0 11 chrX 130015273 130015297 -36634999 - B4 SINE B4 -143 149 63 2 1576 539 296 99 16 chrX 130016168 130016350 -36633946 - MLT1D LTR MaLR -11 494 298 2 1576 3556 158 72 2 chrX 130016843 130017485 -36632811 - RMER1A Other Other -1 1029 343 2 1576 1345 24 0 29 chrX 130017507 130017678 -36632618 - MTA_Mm LTR MaLR -230 166 1 2 1576 9464 20 4 0 chrX 130017678 130018772 -36631524 - MTA_Mm-int LTR MaLR 0 1098 1 2 1576 3243 48 2 12 chrX 130018772 130019172 -36631124 - MTA_Mm LTR MaLR 0 396 1 2 1576 1093 300 69 6 chrX 130019198 130019560 -36630736 - RMER1B Other Other -675 391 7 2 1576 354 23 0 0 chrX 130019808 130019851 -36630445 + (ATTTG)n Simple_repeat Simple_repeat 1 43 0 2 1576 475 312 46 85 chrX 130019983 130020187 -36630109 - MLT1D LTR MaLR -414 213 18 2 1576 21 0 0 0 chrX 130020516 130020537 -36629759 + AT_rich Low_complexity Low_complexity 1 21 0 2 1576 256 405 48 24 chrX 130020913 130021080 -36629216 + LTR88a LTR Gypsy 241 411 -405 2 1576 253 302 49 49 chrX 130022147 130022269 -36628027 + ERVL-E-int LTR ERVL 1801 1922 -3745 3 1576 247 333 36 0 chrX 130022772 130022856 -36627440 - L2c LINE L2 -49 3338 3252 3 1577 1904 113 19 31 chrX 130023801 130024069 -36626227 - Lx4A LINE L1 -331 6727 6463 3 1577 2919 91 166 2 chrX 130024069 130024509 -36625787 - RLTR1B LTR ERV1 0 512 1 3 1577 1904 113 19 31 chrX 130024509 130024559 -36625737 - Lx4A LINE L1 -596 6462 6413 3 1577 1583 159 29 14 chrX 130024567 130024847 -36625449 + Lx4A LINE L1 6775 7058 0 3 1577 618 176 330 21 chrX 130026224 130026457 -36623839 + ORR1D1 LTR MaLR 25 324 -50 3 1577 32163 81 8 6 chrX 130026525 130032456 -36617840 - L1Md_F2 LINE L1 -4 6578 221 3 1577 180 246 56 84 chrX 130032585 130032656 -36617640 + MIRc SINE MIR 7 75 -193 3 1577 6040 66 26 18 chrX 130032732 130033533 -36616763 - RLTR13C2 LTR ERVK 0 808 1 3 1577 572 305 52 31 chrX 130034438 130034631 -36615665 - MIRb SINE MIR -27 241 45 3 1577 203 403 26 0 chrX 130035576 130035653 -36614643 + MIRb SINE MIR 53 131 -137 4 1577 278 312 88 0 chrX 130035761 130035841 -36614455 - B4 SINE B4 -4 288 202 4 1577 765 107 0 0 chrX 130035847 130035959 -36614337 - L1Md_F LINE L1 -6125 394 283 4 1577 3232 62 2 0 chrX 130035973 130036379 -36613917 + L1Md_F2 LINE L1 6176 6582 0 4 1577 667 337 5 14 chrX 130036379 130036590 -36613706 - B4 SINE B4 -78 214 6 4 1577 360 0 0 0 chrX 130036757 130036797 -36613499 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1577 231 290 209 33 chrX 130037790 130037972 -36612324 - L2a LINE L2 0 3426 3213 4 1577 231 0 77 0 chrX 130038711 130038750 -36611546 + (CAAAA)n Simple_repeat Simple_repeat 1 42 0 4 1577 2053 188 68 0 chrX 130039238 130039652 -36610644 + RMER1B Other Other 616 1057 -9 4 1577 21 36 0 0 chrX 130039817 130039845 -36610451 + AT_rich Low_complexity Low_complexity 1 28 0 4 1577 243 0 0 0 chrX 130040515 130040542 -36609754 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1577 887 268 148 25 chrX 130041136 130041461 -36608835 + MLT1A0 LTR MaLR 1 365 0 5 1577 217 70 0 65 chrX 130042495 130042541 -36607755 + (CAAA)n Simple_repeat Simple_repeat 3 45 0 5 1577 9123 30 0 2 chrX 130043134 130044263 -36606033 - L1_Mm LINE L1 -276 5607 4481 5 1577 886 19 0 0 chrX 130044258 130044365 -36605931 + L1_Mm LINE L1 5442 5548 -335 5 1577 1915 221 25 61 chrX 130044361 130044769 -36605527 + L1_Mur3 LINE L1 875 1269 -6459 5 1577 794 62 0 9 chrX 130044769 130044883 -36605413 + (GAA)n Simple_repeat Simple_repeat 2 114 0 5 1577 1915 193 11 13 chrX 130044883 130045311 -36604985 + L1_Mur3 LINE L1 1264 1693 -4187 5 1577 1092 118 53 19 chrX 130045309 130045517 -36604779 + L1_Mur3 LINE L1 4093 4307 -1573 5 1577 4989 42 8 2 chrX 130045517 130046134 -36604162 + L1Md_A LINE L1 5962 6582 0 5 1577 430 252 10 0 chrX 130046151 130046250 -36604046 - Lx6 LINE L1 -1126 6334 6235 5 1577 2685 247 93 18 chrX 130046254 130046332 -36603964 + Lx6 LINE L1 6667 6741 -719 5 1577 189 74 0 0 chrX 130046332 130046359 -36603937 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 5 1577 2685 247 93 18 chrX 130046359 130046498 -36603798 + Lx6 LINE L1 6742 6923 -537 5 1577 534 43 0 0 chrX 130046498 130046567 -36603729 + (GA)n Simple_repeat Simple_repeat 1 69 0 6 1577 2685 247 93 18 chrX 130046567 130047086 -36603210 + Lx6 LINE L1 6924 7459 -1 5 1577 28 71 0 0 chrX 130047305 130047361 -36602935 + AT_rich Low_complexity Low_complexity 1 56 0 6 1577 992 300 18 14 chrX 130047616 130047900 -36602396 - MTE2b LTR MaLR -86 293 9 6 1577 319 322 36 102 chrX 130048295 130048461 -36601835 - MIR SINE MIR -88 174 20 6 1577 585 0 0 0 chrX 130048557 130048622 -36601674 + (TC)n Simple_repeat Simple_repeat 2 66 0 6 1577 216 97 0 0 chrX 130048658 130048689 -36601607 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 6 1577 1365 297 39 32 chrX 130048701 130049195 -36601101 - Lx7 LINE L1 -333 7363 6867 6 1577 254 281 12 24 chrX 130049242 130049326 -36600970 + B4 SINE B4 2 84 -208 6 1577 258 106 0 0 chrX 130049390 130049437 -36600859 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1577 199 227 30 0 chrX 130049943 130050009 -36600287 + GA-rich Low_complexity Low_complexity 4 71 0 6 1577 21 36 0 0 chrX 130052474 130052502 -36597794 + AT_rich Low_complexity Low_complexity 1 28 0 7 1577 938 265 22 31 chrX 130053215 130053437 -36596859 - ORR1E LTR MaLR -132 227 8 7 1577 252 59 0 0 chrX 130054388 130054422 -36595874 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 1577 249 33 0 0 chrX 130055594 130055624 -36594672 + (T)n Simple_repeat Simple_repeat 1 30 0 7 1577 240 338 79 66 chrX 130055785 130055937 -36594359 + MIR SINE MIR 35 188 -74 7 1577 377 317 102 32 chrX 130056219 130056405 -36593891 + MIR SINE MIR 3 201 -61 7 1577 212 257 43 0 chrX 130056648 130056718 -36593578 - MIRb SINE MIR -17 251 179 7 1577 287 396 26 22 chrX 130057889 130058121 -36592175 - MIRb SINE MIR -12 256 24 7 1577 212 373 96 28 chrX 130058239 130058457 -36591839 + MIRb SINE MIR 36 268 0 7 1577 886 374 83 16 chrX 130059778 130060322 -36589974 + L3 LINE CR1 3572 4151 -338 7 1577 1381 215 79 66 chrX 130061113 130061424 -36588872 - ORR1C2 LTR MaLR 0 384 78 8 1577 4274 51 0 0 chrX 130061424 130061949 -36588347 - L1Md_F2 LINE L1 -12 6570 6046 8 1577 1381 215 79 66 chrX 130061949 130062016 -36588280 - ORR1C2 LTR MaLR -307 77 1 8 1577 200 300 129 10 chrX 130063458 130063559 -36586737 + MIR SINE MIR 40 152 -56 8 1577 2128 108 24 12 chrX 130063851 130064187 -36586109 + L1_Mus4 LINE L1 6297 6636 0 8 1577 219 246 0 32 chrX 130064222 130064285 -36586011 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 1577 766 232 34 6 chrX 130064288 130064466 -36585830 + MTE2a LTR MaLR 196 378 -1 8 1577 308 312 0 24 chrX 130064467 130064549 -36585747 + B1F SINE Alu 12 91 -58 8 1577 288 277 29 10 chrX 130064771 130064873 -36585423 + Lx8 LINE L1 7370 7473 0 8 1577 525 184 0 0 chrX 130064979 130065137 -36585159 + CT-rich Low_complexity Low_complexity 2 159 0 8 1577 201 94 0 0 chrX 130065137 130065169 -36585127 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 1577 208 261 0 0 chrX 130065606 130065652 -36584644 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 9 1577 1601 290 30 39 chrX 130065692 130066230 -36584066 + Lx8 LINE L1 6939 7471 -2 9 1577 882 242 57 0 chrX 130066423 130066617 -36583679 + B3 SINE B2 5 209 -7 9 1577 1711 159 322 44 chrX 130068689 130069229 -36581067 + RMER6C LTR ERVK 1 690 0 9 1577 441 0 0 0 chrX 130069395 130069444 -36580852 + (TA)n Simple_repeat Simple_repeat 1 49 0 9 1577 842 340 55 48 chrX 130069503 130069901 -36580395 + MLT1D LTR MaLR 6 406 -99 9 1577 270 0 0 0 chrX 130070039 130070069 -36580227 + (TG)n Simple_repeat Simple_repeat 1 30 0 9 1577 29 0 0 0 chrX 130070301 130070330 -36579966 + AT_rich Low_complexity Low_complexity 1 29 0 9 1577 1113 238 96 70 chrX 130070616 130070960 -36579336 - ORR1D2 LTR MaLR -17 353 1 9 1577 217 240 25 62 chrX 130070978 130071058 -36579238 - B1F SINE Alu -2 147 71 9 1577 23 68 0 0 chrX 130071793 130071837 -36578459 + AT_rich Low_complexity Low_complexity 1 44 0 1 1577 355 250 160 0 chrX 130072242 130072430 -36577866 + L1M5 LINE L1 5260 5477 -647 1 1577 1151 68 0 0 chrX 130072510 130072657 -36577639 + B1_Mus2 SINE Alu 1 147 0 1 1577 625 224 6 17 chrX 130072657 130072834 -36577462 + GA-rich Low_complexity Low_complexity 2 176 0 1 1577 688 181 144 17 chrX 130072931 130073111 -36577185 - MTD LTR MaLR -14 405 203 1 1577 345 100 0 0 chrX 130073134 130073184 -36577112 + (TTCC)n Simple_repeat Simple_repeat 3 52 0 1 1577 616 160 14 101 chrX 130073201 130073340 -36576956 - B1_Mus1 SINE Alu 0 148 22 1 1577 568 298 44 59 chrX 130073337 130073540 -36576756 - MTD LTR MaLR -202 217 18 1 1577 22 0 0 0 chrX 130073875 130073897 -36576399 + AT_rich Low_complexity Low_complexity 1 22 0 1 1577 260 336 60 79 chrX 130074619 130074871 -36575425 + MIRb SINE MIR 5 254 -14 1 1577 1084 50 0 7 chrX 130076401 130076541 -36573755 + B1_Mm SINE Alu 9 147 0 1 1577 537 58 0 0 chrX 130076551 130076620 -36573676 + (GGAA)n Simple_repeat Simple_repeat 3 71 0 1 1577 1308 65 11 11 chrX 130076628 130076892 -36573404 + (GAAA)n Simple_repeat Simple_repeat 1 264 0 1 1577 926 279 64 47 chrX 130078766 130079187 -36571109 + L1MA9 LINE L1 4820 5249 -891 1 1577 3406 33 2 0 chrX 130079187 130079582 -36570714 - MTA_Mm LTR MaLR 0 396 1 1 1577 1369 262 116 16 chrX 130079582 130080158 -36570138 + L1MA9 LINE L1 5250 5883 -429 1 1577 24 0 0 0 chrX 130080198 130080222 -36570074 + AT_rich Low_complexity Low_complexity 1 24 0 1 1577 203 303 43 43 chrX 130080325 130080418 -36569878 + L3 LINE CR1 4380 4472 -17 1 1577 1572 68 126 0 chrX 130080482 130080704 -36569592 - L1_Mus1 LINE L1 -1 6566 6317 1 1577 522 0 0 0 chrX 130081334 130081392 -36568904 + (TC)n Simple_repeat Simple_repeat 1 58 0 1 1577 378 121 0 0 chrX 130081392 130081457 -36568839 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 1577 369 147 47 0 chrX 130082452 130082581 -36567715 + (TAGA)n Simple_repeat Simple_repeat 4 138 0 1 1577 213 175 25 0 chrX 130082837 130082877 -36567419 - L2a LINE L2 -8 3418 3378 1 1577 307 330 31 62 chrX 130082918 130083144 -36567152 - L2 LINE L2 -833 2586 2368 1 1577 334 365 87 46 chrX 130083497 130083738 -36566558 - LTR79 LTR ERVL -116 411 161 1 1577 194 314 0 19 chrX 130084520 130084572 -36565724 + L2c LINE L2 3107 3157 -230 1 1577 517 275 14 21 chrX 130086063 130086208 -36564088 - Lx5 LINE L1 -17 7033 6890 1 1577 495 42 56 0 chrX 130086236 130086308 -36563988 - Lx3A LINE L1 -811 6170 6095 1 1577 233 268 17 51 chrX 130086472 130086489 -36563807 - ID_B1 SINE B4 -129 95 39 1 1577 257 191 0 0 chrX 130086489 130086531 -36563765 - ID4_ SINE ID -4 79 38 1 1577 568 326 281 19 chrX 130087144 130087507 -36562789 - LTR40b LTR ERVL -4 458 1 1 1577 22 0 0 0 chrX 130087512 130087534 -36562762 + AT_rich Low_complexity Low_complexity 1 22 0 1 1577 373 422 14 14 chrX 130087864 130088078 -36562218 + MIRb SINE MIR 47 260 -8 1 1577 591 276 118 25 chrX 130088362 130088566 -36561730 + ID_B1 SINE B4 1 223 -1 1 1577 180 0 0 0 chrX 130091992 130092012 -36558284 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1577 404 291 133 5 chrX 130092040 130092251 -36558045 + L1MD2 LINE L1 4695 4932 -1214 1 1577 638 326 98 0 chrX 130092286 130092550 -36557746 + Lx8 LINE L1 7040 7329 -144 1 1577 675 276 27 27 chrX 130092573 130092759 -36557537 + B3 SINE B2 1 186 -30 1 1577 740 11 11 0 chrX 130092767 130092856 -36557440 + (TAGA)n Simple_repeat Simple_repeat 2 91 0 1 1577 710 289 154 8 chrX 130092870 130093254 -36557042 + L1MD2 LINE L1 5686 6125 -234 1 1577 402 21 0 0 chrX 130094512 130094559 -36555737 + (T)n Simple_repeat Simple_repeat 1 47 0 1 1577 371 354 39 34 chrX 130094642 130094847 -36555449 + MIR SINE MIR 41 246 -16 1 1577 766 215 11 50 chrX 130094980 130095161 -36555135 - Lx9 LINE L1 -402 7242 7069 1 1577 347 272 42 62 chrX 130095176 130095203 -36555093 + Lx9 LINE L1 7457 7481 -163 1 1577 213 39 0 0 chrX 130095203 130095229 -36555067 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1577 347 272 42 62 chrX 130095229 130095393 -36554903 + Lx9 LINE L1 7482 7644 0 1 1577 207 0 0 0 chrX 130095588 130095611 -36554685 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1577 721 226 79 0 chrX 130097144 130097308 -36552988 - Lx9 LINE L1 -388 7256 7080 1 1577 3359 234 78 21 chrX 130097407 130098270 -36552026 + Lx6 LINE L1 5816 6727 -733 1 1577 5429 118 68 11 chrX 130098284 130099170 -36551126 - Lx3B LINE L1 0 6973 6038 1 1577 2957 107 3 6 chrX 130099171 130099647 -36550649 + Lx3C LINE L1 5549 6020 -956 1 1577 278 308 146 0 chrX 130100909 130101039 -36549257 + MIR SINE MIR 5 153 -109 1 1577 257 227 173 0 chrX 130101098 130101173 -36549123 + L2a LINE L2 3332 3419 -7 1 1577 297 0 0 0 chrX 130101409 130101442 -36548854 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1 1577 1102 161 288 15 chrX 130101443 130101714 -36548582 - Lx4B LINE L1 -21 7037 6693 1 1577 250 396 52 0 chrX 130101831 130101927 -36548369 - L2b LINE L2 -10 3365 3265 1 1577 206 219 16 0 chrX 130102172 130102236 -36548060 + (TATATG)n Simple_repeat Simple_repeat 3 67 0 1 1577 22 35 0 0 chrX 130103548 130103577 -36546719 + AT_rich Low_complexity Low_complexity 1 29 0 1 1577 1302 252 50 116 chrX 130103739 130104179 -36546117 - MTD LTR MaLR 0 419 9 1 1577 547 124 0 28 chrX 130104182 130104290 -36546006 + L1_Mus2 LINE L1 6462 6566 0 1 1577 303 325 33 0 chrX 130105244 130105364 -36544932 + L2a LINE L2 2635 2758 -661 1 1577 1446 272 67 2 chrX 130105483 130105889 -36544407 + Lx8 LINE L1 6583 7014 -459 1 1577 1564 42 0 0 chrX 130105886 130106078 -36544218 - L1Md_T LINE L1 -531 6051 5860 1 1577 2878 62 0 0 chrX 130106078 130106446 -36543850 + L1Md_T LINE L1 6215 6582 0 1 1577 720 300 76 42 chrX 130106446 130106895 -36543401 + Lx8 LINE L1 7005 7468 -5 1 1577 569 284 76 62 chrX 130106916 130107205 -36543091 + L2a LINE L2 3134 3426 0 1 1577 390 100 0 0 chrX 130107255 130107315 -36542981 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 1577 472 145 0 0 chrX 130107385 130107461 -36542835 - B2_Mm2 SINE B2 -119 76 1 1 1577 686 232 124 6 chrX 130107585 130107763 -36542533 - B3 SINE B2 -13 203 5 1 1577 431 0 0 36 chrX 130107829 130107885 -36542411 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 1 1577 390 164 68 0 chrX 130108792 130108865 -36541431 + MER58B DNA MER1_type 264 341 0 1 1577 274 273 187 0 chrX 130108872 130109011 -36541285 + MER112 DNA MER1_type 96 260 -1 1 1577 536 349 47 23 chrX 130109011 130109269 -36541027 - L2 LINE L2 -513 2906 2643 1 1577 981 168 0 0 chrX 130109368 130109547 -36540749 + GA-rich Low_complexity Low_complexity 2 180 0 1 1577 207 0 0 0 chrX 130109549 130109572 -36540724 + (GAAA)n Simple_repeat Simple_repeat 1 23 0 1 1577 450 345 24 6 chrX 130110644 130110813 -36539483 + MIRb SINE MIR 23 194 -74 1 1577 569 288 7 14 chrX 130110820 130110968 -36539328 + RSINE1 SINE B4 2 148 -17 1 1577 384 22 0 0 chrX 130110978 130111023 -36539273 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1577 233 208 0 0 chrX 130111373 130111421 -36538875 + L1M3 LINE L1 5551 5598 -570 1 1577 775 51 58 0 chrX 130111445 130111583 -36538713 + (TC)n Simple_repeat Simple_repeat 2 147 0 1 1577 306 0 0 0 chrX 130111584 130111618 -36538678 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1577 1235 310 36 25 chrX 130111691 130112055 -36538241 + MTEa LTR MaLR 3 370 -9 1 1577 405 269 111 29 chrX 130112070 130112372 -36537924 + L1MA4A LINE L1 5656 6021 -279 1 1577 588 132 105 0 chrX 130112564 130112678 -36537618 + Lx2 LINE L1 5237 5362 -515 1 1577 4745 112 8 0 chrX 130112676 130113520 -36536776 - Lx LINE L1 -705 5949 5099 1 1577 4160 128 12 25 chrX 130113521 130114115 -36536181 + Lx LINE L1 5980 6568 -86 1 1577 321 26 0 0 chrX 130114121 130114159 -36536137 + (GTTTG)n Simple_repeat Simple_repeat 2 39 0 1 1577 1097 63 0 14 chrX 130114159 130114296 -36536000 - B1_Mus2 SINE Alu -9 138 2 1 1577 4160 128 12 25 chrX 130114296 130114384 -36535912 + Lx LINE L1 6569 6653 -1 1 1577 24 32 0 0 chrX 130114386 130114417 -36535879 + AT_rich Low_complexity Low_complexity 1 31 0 1 1577 714 55 0 0 chrX 130114447 130114538 -36535758 + (GAAA)n Simple_repeat Simple_repeat 2 92 0 1 1577 8807 112 23 8 chrX 130114538 130116042 -36534254 + Lx2 LINE L1 5363 6903 -94 1 1577 405 0 0 0 chrX 130116253 130116298 -36533998 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 1 1577 339 271 55 18 chrX 130119033 130119142 -36531154 + MER5A DNA MER1_type 38 150 -39 1 1577 424 282 81 13 chrX 130119139 130119290 -36531006 - MER5A DNA MER1_type -8 158 1 1 1577 228 111 0 0 chrX 130122127 130122163 -36528133 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1577 414 39 0 0 chrX 130123766 130123818 -36526478 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1577 823 287 74 68 chrX 130123919 130124408 -36525888 + L1MA6 LINE L1 5529 6020 -280 1 1577 272 253 121 44 chrX 130124435 130124617 -36525679 + L1MA6 LINE L1 6104 6299 -1 1 1577 3880 7 0 0 chrX 130125698 130126132 -36524164 + L1Md_T LINE L1 6149 6582 0 1 1577 203 189 0 0 chrX 130126216 130126253 -36524043 + A-rich Low_complexity Low_complexity 1 37 0 1 1577 615 258 97 10 chrX 130126568 130126764 -36523532 - B3 SINE B2 -2 214 2 1 1577 378 0 0 0 chrX 130126868 130126910 -36523386 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1577 189 107 0 0 chrX 130127000 130127028 -36523268 + (GGA)n Simple_repeat Simple_repeat 3 30 0 1 1577 602 302 20 36 chrX 130127918 130128114 -36522182 + B3A SINE B2 2 194 -4 1 1577 185 358 59 59 chrX 130128688 130128789 -36521507 + L2c LINE L2 3107 3207 -180 1 1577 2674 116 39 5 chrX 130129333 130129749 -36520547 + Lx2B LINE L1 6567 6996 -4 1 1577 328 300 0 12 chrX 130132206 130132287 -36518009 + ID4 SINE ID 4 83 0 1 1577 230 216 14 0 chrX 130134490 130134564 -36515732 + (TCTA)n Simple_repeat Simple_repeat 2 76 0 1 1577 210 71 0 0 chrX 130134688 130134716 -36515580 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1577 1538 22 21 21 chrX 130134778 130134967 -36515329 + B2_Mm1a SINE B2 2 190 -3 1 1577 23 0 0 0 chrX 130135428 130135451 -36514845 + AT_rich Low_complexity Low_complexity 1 23 0 2 1577 276 317 12 0 chrX 130135556 130135638 -36514658 + ID_B1 SINE B4 90 172 -52 2 1577 266 336 17 58 chrX 130135651 130135771 -36514525 + PB1D10 SINE Alu 3 117 0 2 1577 324 0 0 0 chrX 130137310 130137346 -36512950 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1577 1550 264 74 15 chrX 130137704 130138161 -36512135 - Lx8 LINE L1 -352 7121 6638 2 1577 252 0 0 0 chrX 130141061 130141089 -36509207 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 2 1577 1083 50 7 0 chrX 130141093 130141234 -36509062 - B1_Mus1 SINE Alu 0 148 7 2 1577 211 353 24 0 chrX 130142468 130142553 -36507743 + B4A SINE B4 69 155 -137 2 1577 684 0 0 0 chrX 130142628 130142704 -36507592 + (GAAA)n Simple_repeat Simple_repeat 4 79 0 2 1577 302 309 69 78 chrX 130144504 130144708 -36505588 - MIRb SINE MIR -40 228 27 2 1577 180 97 0 0 chrX 130145950 130145981 -36504315 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1577 24 0 0 0 chrX 130146018 130146042 -36504254 + AT_rich Low_complexity Low_complexity 1 24 0 2 1577 232 374 141 6 chrX 130146593 130146749 -36503547 - MIRb SINE MIR -83 185 9 2 1577 1143 56 0 0 chrX 130147676 130147819 -36502477 + B1_Mus2 SINE Alu 5 147 0 2 1577 21 0 0 0 chrX 130149225 130149246 -36501050 + AT_rich Low_complexity Low_complexity 1 21 0 2 1577 305 360 83 36 chrX 130150394 130150671 -36499625 - B4A SINE B4 -2 290 1 2 1577 2768 257 87 16 chrX 130151461 130152366 -36497930 + RCHARR1 DNA MER1_type 2 971 -3 2 1577 324 0 0 0 chrX 130152901 130152937 -36497359 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1577 23 0 0 0 chrX 130153423 130153446 -36496850 + AT_rich Low_complexity Low_complexity 1 23 0 2 1577 403 253 0 12 chrX 130153613 130153693 -36496603 + RSINE1 SINE B4 59 137 -28 2 1577 629 76 11 0 chrX 130153707 130153799 -36496497 + (TC)n Simple_repeat Simple_repeat 1 93 0 2 1577 216 185 0 0 chrX 130153798 130153852 -36496444 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1577 24 32 0 0 chrX 130153852 130153883 -36496413 + AT_rich Low_complexity Low_complexity 1 31 0 2 1578 691 68 33 17 chrX 130154704 130154824 -36495472 + L1_Mus3 LINE L1 6507 6628 -10 2 1578 2240 41 31 7 chrX 130155471 130155764 -36494532 + L1Md_F2 LINE L1 6269 6568 -14 2 1578 2665 89 3 13 chrX 130157346 130157733 -36492563 + L1Md_F2 LINE L1 6200 6582 0 2 1578 2317 67 3 6 chrX 130157743 130158058 -36492238 + L1_Mus2 LINE L1 6252 6565 -1 2 1578 299 310 141 31 chrX 130159195 130159358 -36490938 - MamSINE1 SINE tRNA -9 281 101 2 1578 310 324 63 23 chrX 130160319 130160495 -36489801 - MIR SINE MIR -3 259 78 2 1578 189 0 0 0 chrX 130160495 130160516 -36489780 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 2 1578 241 300 67 39 chrX 130160516 130160543 -36489753 - MIRc SINE MIR -191 77 52 2 1578 302 344 7 30 chrX 130160705 130160840 -36489456 - B1F SINE Alu -17 132 1 2 1578 1392 311 62 12 chrX 130160936 130161352 -36488944 + MLT2B1 LTR ERVL 6 442 -78 2 1578 257 398 89 24 chrX 130161772 130162215 -36488081 + L4 LINE RTE 967 1439 -590 2 1578 574 262 138 20 chrX 130162215 130162410 -36487886 - MER20 DNA MER1_type -1 218 1 2 1578 257 398 89 24 chrX 130162410 130162424 -36487872 + L4 LINE RTE 1440 1453 -576 2 1578 197 351 0 41 chrX 130162519 130162617 -36487679 + MIRb SINE MIR 119 212 -56 2 1578 232 365 185 26 chrX 130162684 130162954 -36487342 + L4 LINE RTE 1526 1838 -191 2 1578 204 67 0 0 chrX 130164381 130164411 -36485885 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1578 405 0 0 0 chrX 130165580 130165625 -36484671 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1578 306 0 0 0 chrX 130167356 130167390 -36482906 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 1578 228 237 32 63 chrX 130168581 130168644 -36481652 - L2c LINE L2 -70 3317 3257 2 1578 242 314 44 44 chrX 130169248 130169338 -36480958 + MIR SINE MIR 41 130 -78 2 1578 1154 61 7 0 chrX 130169425 130169572 -36480724 + B1_Mus1 SINE Alu 1 148 0 2 1578 252 378 33 0 chrX 130170382 130170472 -36479824 - MamSINE1 SINE tRNA -196 94 2 2 1578 846 314 47 11 chrX 130170524 130170798 -36479498 + B4A SINE B4 6 289 -3 2 1578 285 324 161 27 chrX 130170975 130171124 -36479172 - MER5B DNA MER1_type -1 177 9 2 1578 307 295 10 40 chrX 130175771 130175870 -36474426 - AmnSINE1 SINE SINE -9 566 471 2 1578 240 43 21 42 chrX 130176640 130176688 -36473608 + (TAAAA)n Simple_repeat Simple_repeat 2 48 0 2 1578 225 0 0 0 chrX 130176914 130176939 -36473357 + (TTGG)n Simple_repeat Simple_repeat 4 28 0 2 1578 315 212 112 0 chrX 130176948 130177028 -36473268 - PB1D10 SINE Alu -1 116 28 2 1578 234 0 0 0 chrX 130177131 130177157 -36473139 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1578 257 340 6 131 chrX 130177347 130177523 -36472773 + MIRc SINE MIR 77 230 -38 2 1578 243 0 0 0 chrX 130177661 130177688 -36472608 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1578 22 0 0 0 chrX 130177688 130177710 -36472586 + AT_rich Low_complexity Low_complexity 1 22 0 2 1578 273 119 0 0 chrX 130177819 130177861 -36472435 + (GA)n Simple_repeat Simple_repeat 1 42 0 2 1578 525 270 57 46 chrX 130178184 130178378 -36471918 - MER3 DNA MER1_type -9 200 5 2 1578 270 0 0 0 chrX 130178747 130178777 -36471519 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1578 212 304 24 89 chrX 130179165 130179288 -36471008 - MIRm SINE MIR -123 153 39 2 1578 329 0 0 24 chrX 130179712 130179754 -36470542 + (TAA)n Simple_repeat Simple_repeat 3 43 0 2 1578 1198 218 139 38 chrX 130180517 130180884 -36469412 + MamRep434 DNA TcMar 21 424 -2 2 1578 1069 297 81 21 chrX 130181330 130181712 -36468584 - MLT1A1 LTR MaLR -1 407 3 2 1578 400 351 96 65 chrX 130183344 130183728 -36466568 - MLT1A1 LTR MaLR -12 396 1 2 1578 401 367 47 28 chrX 130183886 130184099 -36466197 - L3 LINE CR1 -402 4087 3871 2 1578 479 331 86 15 chrX 130185513 130185780 -36464516 + L2a LINE L2 3141 3426 0 2 1578 633 142 0 0 chrX 130186335 130186448 -36463848 + (GA)n Simple_repeat Simple_repeat 1 113 0 2 1578 335 339 0 8 chrX 130186581 130186703 -36463593 + MIR SINE MIR 82 202 -60 2 1578 531 69 0 0 chrX 130187220 130187292 -36463004 + (GA)n Simple_repeat Simple_repeat 1 72 0 2 1578 1022 296 102 10 chrX 130188685 130189095 -36461201 + Lx8 LINE L1 7024 7471 -2 2 1578 494 238 48 0 chrX 130189128 130189233 -36461063 + B1_Mur1 SINE Alu 1 110 -39 2 1578 1095 30 0 0 chrX 130189240 130189371 -36460925 + (TG)n Simple_repeat Simple_repeat 2 132 0 2 1578 840 191 197 0 chrX 130189378 130189556 -36460740 + B3 SINE B2 4 216 0 2 1578 441 36 0 0 chrX 130192339 130192394 -36457902 + (TC)n Simple_repeat Simple_repeat 1 55 0 2 1578 312 262 103 0 chrX 130195470 130195596 -36454700 - L1MC3 LINE L1 -33 7752 7614 2 1578 215 148 18 36 chrX 130195906 130195962 -36454334 + T-rich Low_complexity Low_complexity 4 58 0 2 1578 198 0 0 0 chrX 130196689 130196711 -36453585 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1578 252 272 72 24 chrX 130196722 130196805 -36453491 - MIRc SINE MIR -100 168 82 2 1578 882 135 0 54 chrX 130197612 130197761 -36452535 + B1_Mur3 SINE Alu 9 149 0 2 1578 2999 205 45 18 chrX 130197993 130198534 -36451762 - Lx6 LINE L1 -1 7459 6911 2 1578 414 0 0 0 chrX 130198534 130198580 -36451716 + (TC)n Simple_repeat Simple_repeat 2 47 0 2 1578 225 0 0 0 chrX 130198580 130198604 -36451692 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1578 2999 205 45 18 chrX 130198604 130198687 -36451609 - Lx6 LINE L1 -550 6910 6818 2 1578 198 87 43 21 chrX 130198994 130199041 -36451255 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1578 397 295 9 9 chrX 130199097 130199210 -36451086 - L1MC LINE L1 -2260 5622 5510 2 1578 252 244 12 12 chrX 130199435 130199518 -36450778 + L1M5 LINE L1 5638 5720 -404 2 1578 21 0 0 0 chrX 130199554 130199575 -36450721 + AT_rich Low_complexity Low_complexity 1 21 0 2 1578 633 27 0 0 chrX 130202131 130202206 -36448090 + (GA)n Simple_repeat Simple_repeat 1 75 0 2 1578 424 254 140 34 chrX 130202356 130202649 -36447647 - L1ME4a LINE L1 -237 5887 5564 2 1578 341 299 102 0 chrX 130202971 130203155 -36447141 - L1ME4a LINE L1 -706 5418 5214 2 1578 252 86 0 0 chrX 130203226 130203261 -36447035 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1578 365 349 40 0 chrX 130203261 130203387 -36446909 + L2a LINE L2 3296 3426 0 2 1578 691 298 79 12 chrX 130203406 130203749 -36446547 + L1MA9 LINE L1 5946 6311 -1 2 1578 28 48 0 0 chrX 130203754 130203796 -36446500 + AT_rich Low_complexity Low_complexity 1 42 0 2 1578 246 132 0 0 chrX 130205531 130205584 -36444712 + (T)n Simple_repeat Simple_repeat 1 53 0 2 1578 1150 55 0 7 chrX 130205584 130205732 -36444564 - B1_Mus2 SINE Alu 0 147 1 2 1578 447 19 0 0 chrX 130207313 130207365 -36442931 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 1578 254 351 37 15 chrX 130208800 130208936 -36441360 - B1F SINE Alu -8 141 3 2 1578 963 68 0 0 chrX 130209550 130209682 -36440614 + (TC)n Simple_repeat Simple_repeat 2 133 0 2 1578 534 70 0 0 chrX 130210735 130210806 -36439490 + (T)n Simple_repeat Simple_repeat 1 71 0 2 1578 327 49 0 0 chrX 130210984 130211025 -36439271 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1578 194 91 30 0 chrX 130211074 130211107 -36439189 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1578 381 127 0 0 chrX 130211608 130211687 -36438609 + (TC)n Simple_repeat Simple_repeat 2 80 0 2 1578 291 71 0 0 chrX 130211687 130211729 -36438567 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1578 306 242 0 0 chrX 130212152 130212218 -36438078 + ID2 SINE ID 18 83 0 2 1578 25 0 0 0 chrX 130213200 130213225 -36437071 + AT_rich Low_complexity Low_complexity 1 25 0 2 1578 21 0 0 0 chrX 130218424 130218445 -36431851 + AT_rich Low_complexity Low_complexity 1 21 0 3 1578 725 33 11 0 chrX 130218996 130219088 -36431208 + (TC)n Simple_repeat Simple_repeat 1 93 0 3 1578 210 125 17 51 chrX 130219280 130219339 -36430957 + CT-rich Low_complexity Low_complexity 1 57 0 3 1578 489 84 0 0 chrX 130222937 130223008 -36427288 + (CCG)n Simple_repeat Simple_repeat 2 72 0 3 1578 186 133 0 0 chrX 130223471 130223501 -36426795 + (CTG)n Simple_repeat Simple_repeat 2 31 0 3 1578 243 214 27 41 chrX 130223625 130223698 -36426598 + (CGGGG)n Simple_repeat Simple_repeat 3 74 0 3 1578 630 39 0 0 chrX 130224244 130224321 -36425975 + (GA)n Simple_repeat Simple_repeat 2 78 0 3 1578 180 0 0 0 chrX 130224524 130224544 -36425752 + (CCGCG)n Simple_repeat Simple_repeat 1 20 0 3 1578 405 0 0 0 chrX 130225262 130225307 -36424989 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1578 245 310 110 0 chrX 130227610 130227710 -36422586 - MIRb SINE MIR -66 202 92 3 1578 263 28 0 27 chrX 130229026 130229063 -36421233 + (TTTTTA)n Simple_repeat Simple_repeat 2 37 0 3 1578 683 86 17 0 chrX 130229345 130229461 -36420835 + (TAGA)n Simple_repeat Simple_repeat 1 118 0 3 1578 204 125 0 0 chrX 130229461 130229493 -36420803 + (CATA)n Simple_repeat Simple_repeat 1 32 0 3 1578 9063 9 0 3 chrX 130231440 130232567 -36417729 - L1Md_T LINE L1 0 6582 5460 3 1578 240 376 43 0 chrX 130233013 130233106 -36417190 - PB1D10 SINE Alu -15 102 6 3 1578 2279 59 0 4 chrX 130234820 130235094 -36415202 - L1Md_F2 LINE L1 -12 6570 6298 3 1578 2249 255 37 73 chrX 130235119 130235587 -36414709 + RCHARR1 DNA MER1_type 5 468 -506 3 1578 515 307 7 28 chrX 130235587 130235731 -36414565 - B1F1 SINE Alu -8 141 1 3 1578 2249 255 37 73 chrX 130235731 130236027 -36414269 + RCHARR1 DNA MER1_type 469 741 -233 3 1578 341 250 29 77 chrX 130236050 130236154 -36414142 - ID_B1 SINE B4 -1 223 125 3 1578 663 185 129 79 chrX 130236148 130236339 -36413957 + RCHARR1 DNA MER1_type 720 940 -34 3 1578 1138 62 0 7 chrX 130236339 130236485 -36413811 + L1_Mus1 LINE L1 6423 6567 0 3 1578 663 185 129 79 chrX 130236485 130236534 -36413762 + RCHARR1 DNA MER1_type 941 972 -2 3 1578 230 305 65 92 chrX 130237106 130237290 -36413006 - L2a LINE L2 0 3387 3209 3 1578 261 119 0 0 chrX 130237309 130237351 -36412945 + (TGG)n Simple_repeat Simple_repeat 1 42 0 3 1578 235 360 101 14 chrX 130237394 130237532 -36412764 - MIR SINE MIR -34 228 79 3 1578 249 140 0 85 chrX 130237622 130237669 -36412627 - L2a LINE L2 -257 3169 3127 3 1578 578 357 43 34 chrX 130238349 130238674 -36411622 + MLT1A1 LTR MaLR 81 408 0 3 1578 366 296 145 39 chrX 130239721 130239923 -36410373 + MLT1A0 LTR MaLR 50 273 -92 3 1578 293 276 32 75 chrX 130239923 130240017 -36410279 - RMER30 DNA MER1_type -1 201 112 3 1578 269 209 50 0 chrX 130240114 130240194 -36410102 + MLT1A0 LTR MaLR 374 428 -39 3 1578 430 280 68 0 chrX 130240600 130240732 -36409564 + MIR SINE MIR 88 228 -34 3 1578 1520 195 49 137 chrX 130240771 130240964 -36409332 - ORR1D1 LTR MaLR 0 374 184 3 1578 261 0 0 0 chrX 130240964 130240993 -36409303 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1578 207 0 0 0 chrX 130240993 130241015 -36409281 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 1578 1520 195 49 137 chrX 130241015 130241230 -36409066 - ORR1D1 LTR MaLR -191 183 2 3 1578 460 223 125 10 chrX 130241282 130241386 -36408910 - ID_B1 SINE B4 -6 218 103 3 1578 359 276 81 57 chrX 130241391 130241514 -36408782 - PB1 SINE Alu 0 127 2 3 1578 244 294 130 0 chrX 130241628 130241720 -36408576 - MLT1C LTR MaLR -363 104 1 3 1578 820 327 87 48 chrX 130242472 130242909 -36407387 - MLT1C LTR MaLR -5 462 9 3 1578 788 272 9 49 chrX 130243072 130243296 -36407000 + B3 SINE B2 1 215 -1 3 1578 916 270 98 35 chrX 130244237 130244555 -36405741 - Lx8 LINE L1 -7 7466 7129 3 1578 228 263 54 123 chrX 130246517 130246647 -36403649 + MIRc SINE MIR 60 180 -88 3 1578 750 324 79 8 chrX 130246814 130247054 -36403242 + MLT1A0 LTR MaLR 1 257 -108 3 1578 300 259 181 7 chrX 130247537 130247734 -36402562 - MIR SINE MIR -19 249 2 3 1578 26 30 0 0 chrX 130247803 130247836 -36402460 + AT_rich Low_complexity Low_complexity 1 33 0 3 1578 674 217 13 40 chrX 130247838 130247987 -36402309 - B1_Mur1 SINE Alu 0 149 5 3 1578 2884 124 49 11 chrX 130248976 130249424 -36400872 + L1_Mus4 LINE L1 6166 6630 -6 3 1578 393 213 10 60 chrX 130249484 130249584 -36400712 - B1_Mur1 SINE Alu -1 148 54 3 1578 300 27 0 0 chrX 130250272 130250309 -36399987 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1578 869 307 38 76 chrX 130251145 130251434 -36398862 + B4A SINE B4 15 292 0 3 1578 29 28 0 0 chrX 130251468 130251504 -36398792 + AT_rich Low_complexity Low_complexity 1 36 0 3 1578 253 289 88 11 chrX 130251863 130251954 -36398342 - MIRb SINE MIR -1 267 170 3 1578 886 284 14 0 chrX 130252170 130252378 -36397918 + B3 SINE B2 1 211 -5 3 1578 746 161 157 118 chrX 130252393 130252597 -36397699 + B3 SINE B2 2 213 -3 3 1578 621 271 8 15 chrX 130252626 130252757 -36397539 + B3 SINE B2 1 130 -86 3 1578 429 246 183 28 chrX 130252815 130252995 -36397301 - MIRb SINE MIR -46 222 15 3 1578 7237 118 30 67 chrX 130253044 130255303 -36394993 + Lx LINE L1 4521 6654 0 3 1578 194 91 30 0 chrX 130255649 130255682 -36394614 + (GGA)n Simple_repeat Simple_repeat 3 36 0 3 1578 257 208 0 70 chrX 130255690 130255747 -36394549 + L2a LINE L2 3033 3085 -341 3 1578 489 71 0 0 chrX 130255898 130255968 -36394328 + (TTGG)n Simple_repeat Simple_repeat 2 71 0 3 1578 2362 161 38 49 chrX 130256496 130256922 -36393374 + MTC LTR MaLR 1 421 0 3 1578 768 67 105 0 chrX 130257209 130257314 -36392982 + B1_Mus1 SINE Alu 26 141 -7 3 1578 285 110 41 0 chrX 130257315 130257388 -36392908 + (CAAA)n Simple_repeat Simple_repeat 1 76 0 3 1578 1171 84 6 6 chrX 130257388 130257567 -36392729 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 3 1578 208 282 96 43 chrX 130257840 130257955 -36392341 - MIRb SINE MIR -50 218 98 3 1578 288 130 0 0 chrX 130259611 130259657 -36390639 + (CAT)n Simple_repeat Simple_repeat 2 47 0 3 1578 279 0 0 0 chrX 130260238 130260269 -36390027 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1578 2024 196 48 3 chrX 130260310 130260688 -36389608 + Lx5 LINE L1 6652 7046 -4 3 1578 431 119 30 0 chrX 130260876 130260943 -36389353 + B2_Mm2 SINE B2 2 70 -125 3 1578 23 54 0 0 chrX 130261207 130261244 -36389052 + AT_rich Low_complexity Low_complexity 1 37 0 3 1578 879 201 0 0 chrX 130261257 130261401 -36388895 - B3 SINE B2 -46 170 27 3 1578 452 111 12 0 chrX 130261419 130261500 -36388796 + (TTTTA)n Simple_repeat Simple_repeat 2 83 0 3 1578 4851 105 26 0 chrX 130261790 130262488 -36387808 - Lx4A LINE L1 -493 6565 5850 3 1578 1724 32 0 0 chrX 130262630 130262816 -36387480 + B2_Mm1t SINE B2 2 187 -6 3 1578 267 265 0 29 chrX 130262910 130262980 -36387316 + MLT1A0 LTR MaLR 279 346 -19 3 1578 297 0 0 0 chrX 130263327 130263360 -36386936 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1578 259 311 115 0 chrX 130263475 130263623 -36386673 - L1MC LINE L1 -2058 5824 5660 3 1578 650 244 87 102 chrX 130263644 130263977 -36386319 + L1MB7 LINE L1 5541 5868 -316 3 1578 264 230 58 0 chrX 130264090 130264177 -36386119 + L1MB7 LINE L1 6083 6174 -10 3 1578 379 241 17 85 chrX 130264437 130264555 -36385741 - L1ME4a LINE L1 0 6124 6015 3 1578 292 268 127 28 chrX 130264636 130264729 -36385567 - L1ME4a LINE L1 -430 5694 5585 3 1578 363 23 0 0 chrX 130264729 130264773 -36385523 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 3 1578 292 268 127 28 chrX 130264773 130264821 -36385475 - L1ME4a LINE L1 -540 5584 5539 3 1578 471 293 72 92 chrX 130265802 130266074 -36384222 + MLT1B LTR MaLR 11 278 -112 3 1578 2990 65 73 0 chrX 130266074 130266445 -36383851 + MTB LTR MaLR 3 400 0 3 1578 471 302 68 83 chrX 130266445 130266549 -36383747 + MLT1B LTR MaLR 252 361 -4 3 1578 3659 67 27 0 chrX 130267144 130267594 -36382702 - L1_Mus1 LINE L1 -2 6565 6104 3 1578 248 254 18 66 chrX 130267646 130267763 -36382533 - MIRc SINE MIR -52 210 100 3 1578 736 324 42 75 chrX 130267902 130268262 -36382034 + MTEa LTR MaLR 1 348 -31 3 1578 664 299 49 31 chrX 130268351 130268575 -36381721 + MIRb SINE MIR 26 253 -15 3 1578 264 270 13 13 chrX 130269156 130269231 -36381065 + MIRc SINE MIR 179 253 -15 3 1578 369 358 34 0 chrX 130269348 130269527 -36380769 - Tigger16a DNA Tigger -273 660 476 3 1578 251 362 12 30 chrX 130269961 130270126 -36380170 + L1M5 LINE L1 5577 5738 -456 3 1578 914 158 184 0 chrX 130270705 130270895 -36379401 - URR1B DNA MER1_type 0 225 1 3 1578 1404 81 11 0 chrX 130270931 130271105 -36379191 + B2_Mm2 SINE B2 1 176 -19 3 1578 231 36 0 0 chrX 130271105 130271133 -36379163 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 3 1578 1111 118 16 31 chrX 130271172 130271364 -36378932 - L1_Mus3 LINE L1 -2 6636 6448 3 1578 534 31 0 0 chrX 130271574 130271638 -36378658 + (TCC)n Simple_repeat Simple_repeat 3 66 0 3 1578 1160 91 0 0 chrX 130271638 130271781 -36378515 - B1_Mus1 SINE Alu -5 143 1 3 1578 229 271 17 0 chrX 130272680 130272739 -36377557 + MIR SINE MIR 116 175 -87 3 1578 190 204 91 0 chrX 130272817 130272861 -36377435 - MIR SINE MIR -32 230 183 3 1578 302 326 84 35 chrX 130272869 130273012 -36377284 + ID_B1 SINE B4 72 221 -3 3 1578 231 319 0 0 chrX 130273022 130273091 -36377205 + ID4 SINE ID 2 70 -13 3 1578 242 329 26 13 chrX 130273409 130273486 -36376810 - L2b LINE L2 -2 3373 3296 3 1578 368 71 18 0 chrX 130274024 130274080 -36376216 + (TTTTC)n Simple_repeat Simple_repeat 1 57 0 3 1578 2110 138 0 3 chrX 130274101 130274414 -36375882 - Lx2 LINE L1 0 6997 6686 3 1578 227 323 30 15 chrX 130274526 130274592 -36375704 + MIRb SINE MIR 30 96 -172 3 1578 200 229 21 0 chrX 130274620 130274668 -36375628 + MIR SINE MIR 158 206 -56 3 1578 307 305 69 15 chrX 130274742 130274872 -36375424 + L2 LINE L2 2232 2368 -1051 3 1578 726 298 56 56 chrX 130274976 130275264 -36375032 + B4A SINE B4 5 292 0 3 1578 1050 58 0 0 chrX 130275522 130275660 -36374636 + (GGAA)n Simple_repeat Simple_repeat 2 139 0 4 1578 1263 177 51 0 chrX 130275766 130275981 -36374315 + URR1A DNA MER1_type 1 226 0 4 1578 494 240 47 19 chrX 130276009 130276115 -36374181 + PB1D10 SINE Alu 2 110 -7 4 1578 1760 69 132 16 chrX 130276650 130276901 -36373395 + L1Md_F2 LINE L1 6291 6570 -12 4 1578 946 81 2 2 chrX 130276949 130277077 -36373219 + L1Md_F2 LINE L1 5427 5586 -297 4 1578 7867 69 27 9 chrX 130277077 130278056 -36372240 + L1Md_F2 LINE L1 5587 6582 0 4 1578 376 91 30 0 chrX 130278418 130278484 -36371812 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 1578 916 265 63 137 chrX 130278591 130278985 -36371311 + MTE2b LTR MaLR 1 365 -14 4 1578 572 323 74 5 chrX 130279535 130279902 -36370394 - L1M5 LINE L1 -476 5648 5257 4 1578 2081 278 133 49 chrX 130279902 130281539 -36368757 + L1MA6 LINE L1 4073 5936 -364 4 1578 870 151 0 0 chrX 130282324 130282559 -36367737 + (TG)n Simple_repeat Simple_repeat 1 235 0 4 1578 210 118 0 0 chrX 130282644 130282678 -36367618 + (TAA)n Simple_repeat Simple_repeat 2 35 0 4 1578 21 36 0 0 chrX 130282686 130282714 -36367582 + AT_rich Low_complexity Low_complexity 1 28 0 4 1578 249 208 35 62 chrX 130282714 130282827 -36367469 - Lx6 LINE L1 -43 7417 7308 4 1578 1403 250 12 158 chrX 130282865 130283373 -36366923 + Lx6 LINE L1 6858 7291 -169 4 1578 241 243 184 61 chrX 130283421 130283535 -36366761 + Lx7 LINE L1 7208 7335 -361 4 1578 527 267 161 4 chrX 130283755 130284003 -36366293 - L1M2 LINE L1 -993 5150 4864 4 1578 689 232 12 1 chrX 130284010 130284190 -36366106 - Lx5 LINE L1 -1257 5793 5598 4 1578 403 306 102 16 chrX 130284195 130284381 -36365915 + Lx8 LINE L1 6484 6685 -788 4 1578 1259 227 141 72 chrX 130284383 130284773 -36365523 + MTD LTR MaLR 1 417 -2 4 1578 691 346 56 20 chrX 130284790 130285185 -36365111 + Lx8 LINE L1 6698 7106 -367 4 1578 288 0 0 0 chrX 130285300 130285332 -36364964 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1579 216 0 0 0 chrX 130290212 130290236 -36360060 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1579 294 323 136 39 chrX 130290431 130290689 -36359607 + L2b LINE L2 1981 2263 -1156 4 1579 316 332 136 25 chrX 130290704 130290902 -36359394 + MIR SINE MIR 7 226 -36 4 1579 333 0 0 0 chrX 130291134 130291171 -36359125 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 4 1579 1210 320 77 6 chrX 130291204 130291670 -36358626 - MLT2B3 LTR ERVL -43 511 13 4 1579 212 401 40 49 chrX 130291779 130292143 -36358153 + L2b LINE L2 2782 3137 -238 4 1579 208 384 75 0 chrX 130292578 130292711 -36357585 - L2b LINE L2 -5 3370 3228 4 1579 442 296 85 32 chrX 130292748 130292974 -36357322 + MIR SINE MIR 22 252 -10 4 1579 198 0 0 0 chrX 130293037 130293059 -36357237 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 1579 203 349 15 0 chrX 130294870 130294936 -36355360 - MIRb SINE MIR -17 251 185 4 1579 530 41 14 0 chrX 130295594 130295667 -36354629 + (TC)n Simple_repeat Simple_repeat 1 74 0 4 1579 435 19 0 0 chrX 130295667 130295718 -36354578 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1579 495 78 0 72 chrX 130295773 130295898 -36354398 + (GAAAA)n Simple_repeat Simple_repeat 5 120 0 4 1579 1400 241 48 6 chrX 130295901 130296255 -36354041 - Lx6 LINE L1 -138 7322 6954 4 1579 374 289 217 20 chrX 130296565 130296717 -36353579 - MER5A DNA MER1_type -7 182 1 4 1579 309 236 64 0 chrX 130296766 130296851 -36353445 - MIR SINE MIR -98 170 74 4 1579 301 309 133 81 chrX 130296912 130297123 -36353173 + MIRb SINE MIR 37 258 -10 4 1579 308 323 90 45 chrX 130297391 130297592 -36352704 + LTR79 LTR ERVL 285 494 -33 4 1579 357 125 0 0 chrX 130297620 130297676 -36352620 + (TTG)n Simple_repeat Simple_repeat 2 57 0 4 1579 441 0 0 0 chrX 130298038 130298087 -36352209 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1579 414 242 40 0 chrX 130298136 130298235 -36352061 - L1ME3A LINE L1 -14 6159 6057 4 1579 577 98 0 18 chrX 130298731 130298845 -36351451 + (CA)n Simple_repeat Simple_repeat 1 112 0 4 1579 257 301 0 27 chrX 130298946 130299021 -36351275 + L2a LINE L2 2849 2921 -498 4 1579 217 309 8 47 chrX 130299044 130299173 -36351123 + CT-rich Low_complexity Low_complexity 2 125 0 4 1579 2955 294 34 40 chrX 130299185 130299650 -36350646 - Lx9 LINE L1 -147 7497 7033 4 1579 655 222 241 0 chrX 130299650 130299812 -36350484 - B3 SINE B2 -15 201 1 4 1579 2955 294 34 40 chrX 130299812 130299860 -36350436 - Lx9 LINE L1 -612 7032 6991 4 1579 1264 103 22 0 chrX 130299860 130300045 -36350251 + B2_Mm2 SINE B2 2 190 -5 4 1579 2955 294 34 40 chrX 130300045 130300626 -36349670 - Lx9 LINE L1 -654 6990 6409 4 1579 245 196 0 0 chrX 130300796 130300847 -36349449 - L1ME3A LINE L1 -32 6141 6091 4 1579 245 285 120 16 chrX 130301052 130301177 -36349119 + L2a LINE L2 3261 3398 -28 4 1579 477 0 0 0 chrX 130301758 130301811 -36348485 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 1579 405 0 0 0 chrX 130301811 130301855 -36348441 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1579 346 361 40 16 chrX 130301962 130302144 -36348152 - MIR3 SINE MIR -20 188 2 4 1579 668 233 15 0 chrX 130302213 130302346 -36347950 + B1_Mur3 SINE Alu 1 135 -14 4 1579 491 45 15 0 chrX 130302346 130302412 -36347884 + (TAA)n Simple_repeat Simple_repeat 2 68 0 4 1579 832 296 85 75 chrX 130302421 130303256 -36347040 - Lx8 LINE L1 -934 6539 5730 4 1579 374 217 102 19 chrX 130303272 130303380 -36346916 + Lx8 LINE L1 6580 6696 -777 4 1579 739 186 12 4 chrX 130303385 130303565 -36346731 - MTE2a LTR MaLR 0 379 164 4 1579 1138 251 25 128 chrX 130303559 130303965 -36346331 - MTEa LTR MaLR -8 371 8 4 1579 318 342 99 104 chrX 130304077 130304299 -36345997 - MIRb SINE MIR -21 247 27 4 1579 646 265 114 48 chrX 130305468 130305711 -36344585 - ORR1D2 LTR MaLR -51 319 54 4 1579 692 188 44 22 chrX 130307636 130307772 -36342524 - B1_Mur4 SINE Alu -11 139 1 4 1579 182 118 29 0 chrX 130308726 130308760 -36341536 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 1579 349 328 132 37 chrX 130310751 130311218 -36339078 - L1MCa LINE L1 -966 1716 1018 4 1579 262 343 79 12 chrX 130311220 130311548 -36338748 + L1MEf LINE L1 44 393 -6007 4 1579 227 314 35 0 chrX 130311708 130311794 -36338502 - ORR1D2 LTR MaLR -2 368 280 4 1579 1636 152 82 66 chrX 130311964 130312329 -36337967 - ORR1C1 LTR MaLR -3 375 5 4 1579 310 335 40 68 chrX 130312513 130312763 -36337533 + L1MEf LINE L1 782 1024 -5391 4 1579 232 271 84 10 chrX 130312779 130312928 -36337368 + L1MEf LINE L1 1062 1210 -5099 4 1579 853 273 0 5 chrX 130313292 130313480 -36336816 + MTD LTR MaLR 1 187 -232 4 1579 38 0 0 0 chrX 130313485 130313523 -36336773 + AT_rich Low_complexity Low_complexity 1 38 0 4 1579 2493 108 5 35 chrX 130313523 130313918 -36336378 - RMER16 LTR ERVK -81 452 70 4 1579 842 229 102 72 chrX 130313971 130314206 -36336090 - RMER12 LTR ERVK 0 1322 1081 4 1579 477 0 0 0 chrX 130314206 130314259 -36336037 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 1579 787 292 36 5 chrX 130314286 130314466 -36335830 + MTD LTR MaLR 179 364 -55 4 1579 2292 43 4 0 chrX 130314466 130314744 -36335552 - L1_Mus2 LINE L1 0 6566 6288 4 1579 787 292 36 5 chrX 130314744 130314783 -36335513 + MTD LTR MaLR 365 404 -15 4 1579 243 286 123 25 chrX 130315309 130315431 -36334865 - MIR SINE MIR -98 164 31 4 1579 21 36 0 0 chrX 130315491 130315519 -36334777 + AT_rich Low_complexity Low_complexity 1 28 0 4 1579 872 298 104 100 chrX 130315728 130316344 -36333952 + RLTR18B LTR ERVK 4 512 0 4 1579 4696 56 0 7 chrX 130316453 130317044 -36333252 + L1Md_F2 LINE L1 5983 6569 -13 4 1579 399 374 45 38 chrX 130317195 130317459 -36332837 + L1MC LINE L1 5347 5612 -2270 4 1579 22 0 0 0 chrX 130317734 130317756 -36332540 + AT_rich Low_complexity Low_complexity 1 22 0 4 1579 789 41 0 0 chrX 130318319 130318416 -36331880 + (CA)n Simple_repeat Simple_repeat 2 98 0 4 1579 477 288 52 13 chrX 130319304 130319459 -36330837 + MER5A1 DNA MER1_type 1 161 -5 4 1579 730 277 15 128 chrX 130319800 130320127 -36330169 + B4A SINE B4 3 292 0 4 1579 369 0 0 0 chrX 130320521 130320562 -36329734 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 4 1579 2006 104 32 16 chrX 130320887 130321200 -36329096 - Lx2 LINE L1 -1 6996 6679 4 1579 2833 131 0 0 chrX 130321202 130321638 -36328658 + Lx2 LINE L1 6235 6670 -327 4 1579 258 105 0 0 chrX 130322684 130322722 -36327574 + (GAAAA)n Simple_repeat Simple_repeat 2 39 0 4 1579 183 42 0 0 chrX 130322776 130322800 -36327496 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4 1579 251 238 0 16 chrX 130323157 130323221 -36327075 + L1M3e LINE L1 57 119 -6911 4 1579 910 232 18 62 chrX 130323263 130323488 -36326808 - ORR1D2 LTR MaLR 0 370 156 4 1579 693 289 63 78 chrX 130323488 130323934 -36326362 + Lx9 LINE L1 7203 7641 -3 4 1579 2051 258 9 17 chrX 130323969 130324460 -36325836 - ORR1D2-int LTR MaLR -163 1417 846 4 1579 307 133 0 62 chrX 130324477 130324541 -36325755 + Lx5 LINE L1 5731 5790 -1260 4 1579 828 180 11 33 chrX 130324541 130324729 -36325567 + B3 SINE B2 6 181 -14 4 1579 2334 272 58 76 chrX 130324731 130325335 -36324961 + Lx5 LINE L1 5776 6447 -603 4 1579 807 21 0 0 chrX 130325335 130325432 -36324864 + (TAGA)n Simple_repeat Simple_repeat 4 100 0 4 1579 2334 282 68 90 chrX 130325432 130326017 -36324279 + Lx5 LINE L1 6448 7030 -20 4 1579 747 62 0 0 chrX 130326046 130326143 -36324153 + (GAAA)n Simple_repeat Simple_repeat 1 97 0 4 1579 606 28 0 0 chrX 130326143 130326214 -36324082 + (GGGA)n Simple_repeat Simple_repeat 2 73 0 4 1579 915 244 35 43 chrX 130326216 130326494 -36323802 - ORR1D2-int LTR MaLR -578 792 512 4 1579 1264 304 85 28 chrX 130326512 130327043 -36323253 - Lx5 LINE L1 -21 7029 6469 4 1579 2167 204 65 17 chrX 130327032 130327632 -36322664 - Lx6 LINE L1 -672 6386 5709 4 1579 1763 97 4 11 chrX 130327632 130327893 -36322403 - L1Md_F2 LINE L1 -12 6570 6312 4 1579 4700 61 5 2 chrX 130327893 130328518 -36321778 + L1Md_F2 LINE L1 5691 6317 -265 4 1579 609 151 7 87 chrX 130328519 130328657 -36321639 - ORR1D2-int LTR MaLR -828 542 416 4 1579 619 243 7 21 chrX 130328834 130328977 -36321319 + B1_Mur2 SINE Alu 1 141 -8 4 1579 632 277 45 32 chrX 130329026 130329246 -36321050 + ID_B1 SINE B4 2 224 0 4 1579 1447 253 27 22 chrX 130329271 130329679 -36320617 - ORR1D2-int LTR MaLR -944 426 17 4 1579 1343 257 39 6 chrX 130329682 130330038 -36320258 - ORR1D2 LTR MaLR 0 370 3 4 1579 443 291 118 45 chrX 130330038 130330369 -36319927 - L1M4 LINE L1 -943 5203 4849 4 1579 3034 178 11 0 chrX 130330407 130330953 -36319343 + Lx5 LINE L1 6203 6754 -296 4 1579 815 210 27 5 chrX 130330953 130331140 -36319156 + Lx5 LINE L1 6857 7047 -3 4 1579 267 157 0 0 chrX 130331673 130331724 -36318572 + T-rich Low_complexity Low_complexity 1 51 0 4 1579 799 281 46 28 chrX 130331733 130332059 -36318237 - L1MA6 LINE L1 -376 5924 5593 4 1579 4202 199 32 1 chrX 130332091 130332860 -36317436 - Lx5 LINE L1 -4 7046 6254 4 1579 10036 18 0 0 chrX 130332860 130334011 -36316285 + L1Md_T LINE L1 4431 5581 -302 5 1579 8462 31 0 0 chrX 130334011 130335007 -36315289 + L1Md_T LINE L1 5587 6582 0 5 1579 1771 193 53 19 chrX 130335024 130335587 -36314709 - Lx5 LINE L1 -950 4927 4596 4 1579 2837 39 0 0 chrX 130335587 130335925 -36314371 + L1Md_F2 LINE L1 5248 5585 -298 5 1579 8109 43 4 1 chrX 130335926 130336919 -36313377 + L1Md_F2 LINE L1 5587 6582 0 5 1579 6806 123 99 24 chrX 130336920 130338066 -36312230 - Lx5 LINE L1 -1268 4609 3363 4 1579 1113 95 0 0 chrX 130338066 130338213 -36312083 + B1_Mus1 SINE Alu 2 148 0 5 1579 6806 123 99 24 chrX 130338213 130338345 -36311951 - Lx5 LINE L1 -2515 3362 3235 4 1579 607 133 0 58 chrX 130338338 130338458 -36311838 - Lx5 LINE L1 -3030 2847 2735 4 1579 12004 57 0 3 chrX 130338451 130340039 -36310257 - L1Md_F2 LINE L1 -641 5941 4360 5 1579 2293 187 15 10 chrX 130340039 130340450 -36309846 + Lx5 LINE L1 6638 7050 0 5 1579 4813 169 254 4 chrX 130340471 130340915 -36309381 - Lx5 LINE L1 -3123 2754 2310 4 1579 198 0 0 0 chrX 130340915 130340937 -36309359 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 1579 4813 185 168 10 chrX 130340937 130341977 -36308319 - Lx5 LINE L1 -3568 2309 889 4 1579 1059 51 19 6 chrX 130342235 130342392 -36307904 - L1_Mus3 LINE L1 -6 6632 6474 5 1579 640 276 0 34 chrX 130342663 130342783 -36307513 + Lx8 LINE L1 6777 6892 -581 5 1579 1826 146 17 61 chrX 130342783 130343127 -36307169 + ORR1A4 LTR MaLR 1 329 0 5 1579 640 276 0 34 chrX 130343127 130343182 -36307114 + Lx8 LINE L1 6893 6946 -527 5 1579 1836 239 19 24 chrX 130343187 130343598 -36306698 - MTD LTR MaLR 0 419 11 5 1579 1308 248 102 15 chrX 130343798 130344192 -36306104 + Lx8 LINE L1 7041 7468 -5 5 1579 241 296 93 0 chrX 130344222 130344330 -36305966 + Lx6 LINE L1 7343 7460 0 5 1579 233 364 0 0 chrX 130344505 130344571 -36305725 + LTR40c LTR ERVL 1 66 -453 5 1579 960 347 29 51 chrX 130344643 130345053 -36305243 + LTR53 LTR ERVL 98 498 -21 5 1579 282 160 0 0 chrX 130345071 130345121 -36305175 + (TATG)n Simple_repeat Simple_repeat 1 50 0 5 1579 283 359 70 42 chrX 130345123 130345435 -36304861 + LTR40c LTR ERVL 142 462 0 5 1579 446 277 21 42 chrX 130346276 130346419 -36303877 - B1F1 SINE Alu -7 142 3 5 1579 723 207 76 14 chrX 130346764 130346847 -36303449 + Lx9 LINE L1 7421 7517 -127 5 1579 429 36 0 0 chrX 130346847 130346902 -36303394 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1579 723 207 76 14 chrX 130346902 130347029 -36303267 + Lx9 LINE L1 7518 7644 0 5 1579 2866 61 5 18 chrX 130347047 130347177 -36303119 + L1_Mus3 LINE L1 6258 6387 -251 5 1579 2209 87 126 6 chrX 130347177 130347525 -36302771 + RLTR10 LTR ERVK 1 390 0 5 1579 2866 61 5 18 chrX 130347525 130347780 -36302516 + L1_Mus3 LINE L1 6388 6638 0 5 1579 21 0 0 0 chrX 130347782 130347803 -36302493 + AT_rich Low_complexity Low_complexity 1 21 0 5 1579 1067 119 0 36 chrX 130347857 130348023 -36302273 + Lx2 LINE L1 6484 6643 -354 5 1579 1578 108 0 0 chrX 130348023 130348246 -36302050 + Lx2 LINE L1 6775 6997 0 5 1579 284 248 39 55 chrX 130349319 130349447 -36300849 - L1M3 LINE L1 -1528 4612 4487 5 1579 242 275 126 63 chrX 130349455 130349614 -36300682 - MER113A DNA MER1_type -63 251 83 5 1579 340 336 46 0 chrX 130349618 130349749 -36300547 - MIR SINE MIR -27 235 99 5 1579 425 290 116 31 chrX 130349768 130350060 -36300236 + L1MB3 LINE L1 4252 4568 -1572 5 1579 877 220 115 0 chrX 130350069 130350269 -36300027 - MTD LTR MaLR 0 419 197 5 1579 259 304 57 45 chrX 130350275 130350451 -36299845 + L1M5 LINE L1 5694 5871 -308 5 1579 764 228 58 11 chrX 130350473 130350664 -36299632 - MTD LTR MaLR -217 202 3 5 1579 467 236 153 19 chrX 130350665 130350881 -36299415 + L1MB3 LINE L1 4573 4817 -1323 5 1579 659 244 39 52 chrX 130350889 130351131 -36299165 + B4A SINE B4 1 265 -27 5 1579 285 29 0 0 chrX 130351240 130351274 -36299022 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1579 448 283 76 0 chrX 130351366 130351511 -36298785 + L1MB3 LINE L1 5319 5474 -709 5 1579 4197 299 68 34 chrX 130351510 130352205 -36298091 - Lx8 LINE L1 -7 7466 6750 5 1579 2107 157 67 8 chrX 130352205 130352577 -36297719 + ORR1B1 LTR MaLR 1 394 0 5 1579 4197 294 68 26 chrX 130352577 130353970 -36296326 - Lx8 LINE L1 -724 6749 5273 5 1579 300 53 0 0 chrX 130354045 130354083 -36296213 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1579 225 83 0 0 chrX 130354095 130354131 -36296165 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 5 1579 475 259 29 0 chrX 130354196 130354352 -36295944 + L1M2 LINE L1 5083 5264 -879 5 1579 1175 253 153 19 chrX 130354350 130354931 -36295365 + L1MB3 LINE L1 5463 6121 -62 5 1579 302 270 45 9 chrX 130354972 130355084 -36295212 + Ricksha_0 DNA MuDR 9 124 -1609 5 1579 36 0 0 0 chrX 130355379 130355415 -36294881 + AT_rich Low_complexity Low_complexity 1 36 0 5 1579 1363 260 34 38 chrX 130355500 130355948 -36294348 + Ricksha_0 DNA MuDR 447 892 -841 5 1579 2186 199 51 119 chrX 130355949 130356771 -36293525 + L1_Mur3 LINE L1 4228 4993 -887 5 1579 1351 190 103 6 chrX 130356777 130357126 -36293170 + Lx9 LINE L1 7261 7643 -1 5 1579 1365 225 37 9 chrX 130357148 130357475 -36292821 + L1_Mur3 LINE L1 4975 5310 -570 5 1579 3236 209 59 5 chrX 130357632 130358273 -36292023 + Lx7 LINE L1 6262 6937 -759 5 1579 332 299 0 0 chrX 130358272 130358369 -36291927 + Lx7 LINE L1 7215 7311 -385 5 1579 263 318 28 34 chrX 130358376 130358552 -36291744 + Lx7 LINE L1 7506 7680 -16 5 1579 305 0 0 0 chrX 130358590 130358630 -36291666 + L1_Mus4 LINE L1 6584 6623 -13 5 1579 330 352 62 46 chrX 130358778 130359103 -36291193 - L1M5 LINE L1 -1452 4694 4365 5 1579 240 111 0 0 chrX 130359212 130359248 -36291048 + (CAGA)n Simple_repeat Simple_repeat 3 38 0 5 1579 22 35 0 0 chrX 130359403 130359432 -36290864 + AT_rich Low_complexity Low_complexity 1 29 0 5 1579 290 310 0 0 chrX 130359966 130360024 -36290272 - ID4 SINE ID -14 69 12 5 1579 2048 181 34 32 chrX 130360081 130360282 -36290014 + MTC LTR MaLR 1 200 -221 5 1579 695 106 24 0 chrX 130360282 130360405 -36289891 + L1_Mus3 LINE L1 6508 6633 -5 5 1579 2048 181 34 32 chrX 130360405 130360615 -36289681 + MTC LTR MaLR 201 413 -8 5 1579 335 286 102 11 chrX 130360742 130360929 -36289367 - L1MA9 LINE L1 -219 6093 5890 5 1579 550 372 15 5 chrX 130361529 130361726 -36288570 + ID_B1 SINE B4 6 204 -20 5 1579 279 0 0 0 chrX 130361734 130361765 -36288531 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 5 1579 2026 273 28 11 chrX 130362372 130362988 -36287308 + L1MC1 LINE L1 5705 6330 -3 5 1579 319 319 16 48 chrX 130363093 130363218 -36287078 + HAL1 LINE L1 1251 1371 -1136 5 1579 271 287 23 11 chrX 130363361 130363449 -36286847 + MamSINE1 SINE tRNA 18 106 -184 5 1579 477 0 0 0 chrX 130363465 130363518 -36286778 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 5 1579 273 57 0 0 chrX 130364539 130364574 -36285722 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1579 592 348 5 5 chrX 130364941 130365129 -36285167 + MIR3 SINE MIR 20 207 -1 5 1579 308 322 90 7 chrX 130365409 130365553 -36284743 - MLT1A0 LTR MaLR -15 452 297 5 1579 267 338 12 0 chrX 130365614 130365694 -36284602 - ID4 SINE ID -2 81 1 5 1579 344 329 27 27 chrX 130365694 130365840 -36284456 - MLT1A0 LTR MaLR -209 156 11 5 1579 213 65 0 0 chrX 130365891 130365922 -36284374 + (CAA)n Simple_repeat Simple_repeat 3 33 0 5 1579 1177 55 0 7 chrX 130365923 130366071 -36284225 + B1_Mm SINE Alu 1 147 0 5 1579 582 322 88 105 chrX 130366275 130366674 -36283622 - MTD LTR MaLR -15 404 13 5 1579 1906 47 0 0 chrX 130366682 130366916 -36283380 - L1_Mus1 LINE L1 -736 5902 5669 5 1579 5004 86 7 0 chrX 130366916 130367602 -36282694 + L1_Mus1 LINE L1 5876 6566 -1 5 1579 22 0 0 0 chrX 130367606 130367628 -36282668 + AT_rich Low_complexity Low_complexity 1 22 0 5 1579 747 274 105 8 chrX 130368334 130368591 -36281705 + Lx7 LINE L1 6999 7280 -416 5 1579 1288 237 81 55 chrX 130368600 130368721 -36281575 + L1MB7 LINE L1 5555 5678 -506 5 1579 1032 30 76 0 chrX 130368721 130368852 -36281444 + B1_Mus1 SINE Alu 1 141 -7 5 1579 1288 237 81 55 chrX 130368852 130369222 -36281074 + L1MB7 LINE L1 5679 6059 -125 5 1579 293 222 120 22 chrX 130369260 130369352 -36280944 - MLT2B3 LTR ERVL -434 120 20 5 1579 467 72 0 0 chrX 130369382 130369451 -36280845 + L1Md_F2 LINE L1 6502 6570 -12 5 1579 468 198 70 35 chrX 130369616 130369731 -36280565 - PB1D9 SINE Alu 0 120 2 5 1579 286 255 100 36 chrX 130369635 130369745 -36280551 - B4A SINE B4 -105 187 71 5 1579 3106 68 18 2 chrX 130370008 130370409 -36279887 + MTB_Mm LTR MaLR 1 407 0 5 1579 2234 291 51 35 chrX 130370586 130371484 -36278812 - Lx9 LINE L1 -594 7050 6138 5 1579 599 282 84 68 chrX 130372066 130372357 -36277939 - L1M2 LINE L1 -1193 4947 4652 5 1579 270 0 0 0 chrX 130372357 130372387 -36277909 + (TC)n Simple_repeat Simple_repeat 2 31 0 5 1579 468 0 0 0 chrX 130372387 130372438 -36277858 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1579 599 282 84 68 chrX 130372438 130372658 -36277638 - L1M2 LINE L1 -1489 4651 4428 5 1579 511 264 40 25 chrX 130372759 130372957 -36277339 - L1M2 LINE L1 -1708 4435 4235 5 1579 1070 296 31 21 chrX 130373105 130373530 -36276766 - L1M2 LINE L1 -2292 3851 3423 5 1579 659 75 0 61 chrX 130373604 130373718 -36276578 - L1_Mus1 LINE L1 -1 6566 6460 5 1579 1582 89 0 18 chrX 130373718 130373947 -36276349 + L1Md_F2 LINE L1 4672 4896 -987 5 1579 3626 81 8 0 chrX 130373942 130374425 -36275871 + L1_Mus1 LINE L1 5944 6430 -137 5 1579 4867 48 2 0 chrX 130374471 130375073 -36275223 + L1Md_F2 LINE L1 4984 5586 -297 5 1579 8235 41 2 0 chrX 130375073 130376067 -36274229 + L1Md_F2 LINE L1 5587 6582 0 5 1579 240 282 53 22 chrX 130376341 130376492 -36273804 - L1MCa LINE L1 -4617 1800 1623 5 1579 247 298 117 0 chrX 130376611 130376782 -36273514 - L1_Mur1 LINE L1 -4161 1725 1535 5 1579 187 31 62 0 chrX 130376882 130376914 -36273382 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 5 1579 2197 200 68 12 chrX 130377181 130377536 -36272760 + Lx6 LINE L1 6966 7327 -133 5 1579 524 15 15 0 chrX 130377536 130377601 -36272695 + (GA)n Simple_repeat Simple_repeat 1 66 0 5 1579 2197 199 68 13 chrX 130377601 130377720 -36272576 + Lx6 LINE L1 7328 7455 -5 5 1579 846 294 83 35 chrX 130377979 130378233 -36272063 + B4A SINE B4 7 272 -20 5 1579 507 301 32 0 chrX 130378316 130378472 -36271824 - RCHARR1 DNA MER1_type -650 324 164 5 1579 736 278 43 11 chrX 130378472 130378709 -36271587 - Lx8 LINE L1 -655 7041 6802 5 1579 345 370 0 0 chrX 130378710 130378810 -36271486 + PB1 SINE Alu 6 105 -22 5 1579 266 319 189 25 chrX 130379469 130379749 -36270547 + L2a LINE L2 2574 2899 -520 5 1579 294 338 115 54 chrX 130379755 130380180 -36270116 + MLT1J LTR MaLR 4 454 -58 5 1579 197 355 121 31 chrX 130381191 130381514 -36268782 - L2 LINE L2 -764 2655 2304 5 1579 912 154 220 0 chrX 130381514 130381696 -36268600 - URR1A DNA MER1_type -4 222 1 5 1579 448 292 85 34 chrX 130381887 130382055 -36268241 + MLT1C LTR MaLR 5 178 -289 5 1579 497 269 0 0 chrX 130382055 130382159 -36268137 + PB1D9 SINE Alu 1 104 -16 5 1579 422 291 87 37 chrX 130382159 130382219 -36268077 + MLT1C LTR MaLR 174 244 -146 5 1579 3165 240 86 54 chrX 130382340 130383543 -36266753 + RMER1B Other Other 49 1059 -7 5 1579 948 284 68 22 chrX 130383571 130383892 -36266404 + Lx7 LINE L1 6984 7319 -377 5 1579 495 0 0 0 chrX 130383898 130383953 -36266343 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 1579 438 119 0 0 chrX 130383953 130384037 -36266259 + (GA)n Simple_repeat Simple_repeat 2 85 0 5 1579 243 196 59 0 chrX 130384037 130384088 -36266208 - ORR1C1 LTR MaLR -191 187 134 5 1579 257 158 35 0 chrX 130384401 130384458 -36265838 + GA-rich Low_complexity Low_complexity 3 61 0 5 1579 1120 102 6 11 chrX 130384458 130384637 -36265659 + (GGGA)n Simple_repeat Simple_repeat 1 178 0 5 1579 306 298 21 127 chrX 130384639 130384781 -36265515 + MLT1C LTR MaLR 260 386 -4 5 1579 217 358 97 31 chrX 130384826 130385022 -36265274 - L2 LINE L2 -923 2496 2288 5 1579 237 333 0 0 chrX 130385237 130385312 -36264984 + L2a LINE L2 3344 3418 -8 5 1579 335 69 35 0 chrX 130386490 130386548 -36263748 + (TTTTTG)n Simple_repeat Simple_repeat 1 60 0 6 1579 351 0 0 0 chrX 130388547 130388586 -36261710 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1579 289 269 70 70 chrX 130389972 130390072 -36260224 - MIRc SINE MIR -127 141 42 6 1579 1141 57 29 0 chrX 130390177 130390352 -36259944 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 6 1579 221 324 40 0 chrX 130391651 130391725 -36258571 + MamSINE1 SINE tRNA 15 91 -199 6 1579 204 40 0 0 chrX 130392062 130392087 -36258209 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 6 1579 323 234 160 60 chrX 130394758 130394908 -36255388 - MIRb SINE MIR -29 239 75 6 1579 462 252 252 26 chrX 130395080 130395231 -36255065 + B3A SINE B2 2 186 -12 6 1579 850 218 94 30 chrX 130395279 130395482 -36254814 + B3 SINE B2 1 216 0 6 1579 1901 111 3 54 chrX 130395830 130396145 -36254151 + Lx2 LINE L1 6527 6825 -172 6 1579 509 267 26 0 chrX 130397600 130397716 -36252580 + PB1D7 SINE Alu 2 120 0 6 1579 453 19 0 0 chrX 130398106 130398160 -36252136 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1579 372 43 0 0 chrX 130398403 130398449 -36251847 + (TTG)n Simple_repeat Simple_repeat 2 47 0 6 1579 226 278 148 0 chrX 130398533 130398648 -36251648 + L1MD3 LINE L1 7849 7980 -15 6 1579 1026 252 14 0 chrX 130398674 130398884 -36251412 + B3 SINE B2 4 216 0 6 1579 570 267 104 11 chrX 130402133 130402315 -36247981 - B3 SINE B2 -17 199 1 6 1579 306 0 0 0 chrX 130404780 130404814 -36245482 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1579 1275 55 0 0 chrX 130405089 130405235 -36245061 - B1_Mm SINE Alu 0 147 2 6 1579 190 351 97 39 chrX 130407741 130407895 -36242401 + MER5A DNA MER1_type 1 163 -26 6 1579 1261 198 14 0 chrX 130407925 130408137 -36242159 - B3 SINE B2 -1 215 1 6 1579 2005 137 66 51 chrX 130408437 130408829 -36241467 + RMER10B LTR ERVL 1 398 0 6 1579 223 290 175 66 chrX 130409056 130409089 -36241207 - B2_Mm1a SINE B2 -7 186 3 6 1579 730 248 0 0 chrX 130409089 130409222 -36241074 - RSINE1 SINE B4 -29 136 4 6 1579 434 341 75 51 chrX 130409311 130409685 -36240611 - L1M4 LINE L1 -5581 961 579 6 1579 42163 6 0 1 chrX 130409689 130416473 -36233823 - L1Md_A LINE L1 0 6582 1 6 197 577 287 65 97 chrX 130416585 130416986 -36233310 - L1M4 LINE L1 -6116 426 39 6 1580 289 251 52 66 chrX 130417220 130417402 -36232894 + L1M4 LINE L1 1453 1687 -5217 6 1580 495 269 106 39 chrX 130417555 130417816 -36232480 + L1M4 LINE L1 1680 1969 -5040 6 1580 229 319 52 17 chrX 130417817 130417932 -36232364 + RMER12 LTR ERVK 726 844 -478 6 1580 440 255 160 0 chrX 130417933 130418110 -36232186 + L1M4 LINE L1 2047 2254 -4754 6 1580 1132 189 10 0 chrX 130418114 130418320 -36231976 + B3 SINE B2 9 216 0 6 1580 342 352 40 25 chrX 130418339 130418537 -36231759 + L1M4 LINE L1 2235 2435 -4573 6 1580 331 252 100 31 chrX 130418708 130418868 -36231428 + L1ME2 LINE L1 5777 5947 -217 6 1580 706 199 6 38 chrX 130419116 130419273 -36231023 - MIR SINE MIR -30 232 81 6 1580 234 304 0 55 chrX 130420515 130420588 -36229708 + ID4 SINE ID 2 70 -13 6 1580 492 18 0 0 chrX 130420589 130420646 -36229650 + (CA)n Simple_repeat Simple_repeat 1 57 0 6 1580 234 295 159 23 chrX 130420688 130420820 -36229476 + MIRb SINE MIR 52 201 -67 6 1580 1286 48 0 7 chrX 130421655 130421803 -36228493 + B1_Mus2 SINE Alu 1 147 0 6 1580 202 51 0 71 chrX 130421899 130421941 -36228355 + (CAAAAA)n Simple_repeat Simple_repeat 1 39 0 6 1580 288 0 0 0 chrX 130422463 130422495 -36227801 + (A)n Simple_repeat Simple_repeat 1 32 0 6 1580 189 0 0 0 chrX 130423098 130423119 -36227177 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1580 1127 220 67 97 chrX 130423674 130424076 -36226220 + RMER1C Other Other 935 1324 -18 6 1580 833 179 192 16 chrX 130424151 130424333 -36225963 + B3 SINE B2 1 214 -2 6 1580 1083 261 17 54 chrX 130424614 130424910 -36225386 - B4 SINE B4 0 292 8 6 1580 211 140 40 0 chrX 130424962 130425012 -36225284 + CT-rich Low_complexity Low_complexity 2 53 0 6 1580 212 295 16 0 chrX 130428194 130428255 -36222041 + ID4_ SINE ID 2 63 -20 6 1580 267 75 48 36 chrX 130428360 130428443 -36221853 + T-rich Low_complexity Low_complexity 2 85 0 6 1580 745 221 21 0 chrX 130428454 130428594 -36221702 - B1_Mur4 SINE Alu -7 143 1 6 1580 461 262 22 73 chrX 130428856 130428992 -36221304 + B1_Mur4 SINE Alu 11 139 -11 6 1580 2637 90 3 6 chrX 130430747 130431093 -36219203 + L1_Mus4 LINE L1 6292 6636 0 6 1580 264 30 0 0 chrX 130431498 130431531 -36218765 + (T)n Simple_repeat Simple_repeat 1 33 0 6 1580 1085 64 23 0 chrX 130433078 130433250 -36217046 + (TTC)n Simple_repeat Simple_repeat 2 177 0 6 1580 513 0 0 0 chrX 130434301 130434358 -36215938 + (GAAA)n Simple_repeat Simple_repeat 3 59 0 6 1580 333 266 53 59 chrX 130434722 130434874 -36215422 - MIRb SINE MIR -21 247 97 6 1580 196 102 20 20 chrX 130435922 130435972 -36214324 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 1580 736 166 54 61 chrX 130436389 130436537 -36213759 - B1_Mur1 SINE Alu -2 147 1 6 1580 207 300 85 45 chrX 130437145 130437323 -36212973 - L2b LINE L2 -28 3359 3183 6 1580 378 0 0 0 chrX 130437693 130437735 -36212561 + (GA)n Simple_repeat Simple_repeat 2 43 0 6 1580 1377 65 0 0 chrX 130437799 130437968 -36212328 - L1Md_T LINE L1 0 6582 6414 6 1580 183 42 0 0 chrX 130437999 130438023 -36212273 + (TTG)n Simple_repeat Simple_repeat 1 24 0 6 1580 1257 67 18 0 chrX 130438032 130438197 -36212099 - L1Md_T LINE L1 -1 6581 6414 6 1580 264 30 0 0 chrX 130438223 130438256 -36212040 + (TTG)n Simple_repeat Simple_repeat 1 33 0 6 1580 8384 37 3 1 chrX 130438265 130439257 -36211039 - L1Md_A LINE L1 -2 6580 5587 6 1580 8960 23 0 0 chrX 130439270 130440288 -36210008 + L1Md_A LINE L1 4566 5583 -300 6 1580 51 58 0 0 chrX 130440811 130440897 -36209399 + AT_rich Low_complexity Low_complexity 1 86 0 6 1580 900 129 7 7 chrX 130441148 130441289 -36209007 + B1_Mus2 SINE Alu 6 146 -1 6 1580 833 302 28 25 chrX 130441722 130442004 -36208292 - Lx8 LINE L1 -155 7318 7036 6 1580 364 329 16 16 chrX 130442014 130442158 -36208138 - B1F SINE Alu -5 144 1 6 1580 246 306 51 0 chrX 130442597 130442695 -36207601 + Lx7 LINE L1 7579 7681 -15 6 1580 540 30 0 0 chrX 130443836 130443902 -36206394 + (TC)n Simple_repeat Simple_repeat 2 67 0 6 1580 315 0 0 0 chrX 130443902 130443936 -36206360 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1580 279 0 0 0 chrX 130444060 130444091 -36206205 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 1580 546 16 0 0 chrX 130446813 130446876 -36203420 + (TC)n Simple_repeat Simple_repeat 2 64 0 6 1580 187 361 24 32 chrX 130447937 130448063 -36202233 + MIRm SINE MIR 45 169 -107 6 1580 366 147 34 17 chrX 130448590 130448708 -36201588 + (TCTCTG)n Simple_repeat Simple_repeat 2 121 0 6 1580 197 0 0 67 chrX 130449212 130449242 -36201054 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 6 1580 596 200 0 0 chrX 130450157 130450267 -36200029 - PB1D10 SINE Alu -6 111 2 6 1580 371 240 16 2 chrX 130451378 130451479 -36198817 + RSINE1 SINE B4 1 104 -188 6 1580 252 0 0 0 chrX 130451511 130451539 -36198757 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1580 640 254 0 14 chrX 130452854 130452998 -36197298 - RSINE1 SINE B4 -21 144 3 6 1580 289 243 122 0 chrX 130453237 130453311 -36196985 - ID4 SINE ID 0 83 1 6 1580 311 280 86 35 chrX 130453738 130453912 -36196384 - MIRb SINE MIR -56 212 30 6 1580 351 246 0 0 chrX 130454392 130454461 -36195835 + ID4 SINE ID 12 80 -3 6 1580 287 310 12 12 chrX 130454461 130454477 -36195819 + ID_B1 SINE B4 12 96 -128 6 1580 194 269 0 69 chrX 130454847 130454919 -36195377 + MIRc SINE MIR 165 231 -37 6 1580 392 376 19 24 chrX 130454998 130455205 -36195091 - L3 LINE CR1 -1032 3457 3252 6 1580 342 275 17 17 chrX 130456205 130456219 -36194077 + ID_B1 SINE B4 73 165 -59 6 1580 504 210 40 0 chrX 130456219 130456319 -36193977 + PB1D10 SINE Alu 6 109 -8 6 1580 1464 279 126 43 chrX 130456504 130457790 -36192506 - L1ME1 LINE L1 -25 6154 4765 6 1580 180 77 0 0 chrX 130457791 130457817 -36192479 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 1580 955 228 95 29 chrX 130457817 130458133 -36192163 - Lx9 LINE L1 -3 7641 7305 6 1580 2177 200 149 9 chrX 130460955 130461485 -36188811 - RMER20B LTR ERVK -20 607 4 6 1580 295 349 0 27 chrX 130462177 130462289 -36188007 + PB1D10 SINE Alu 1 109 -8 6 1580 241 195 48 83 chrX 130462330 130462414 -36187882 - L1ME4a LINE L1 -99 6025 5945 6 1580 355 277 71 28 chrX 130462595 130462736 -36187560 + B1F SINE Alu 3 149 0 6 1580 510 17 0 0 chrX 130462846 130462905 -36187391 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1580 627 231 76 11 chrX 130464084 130464268 -36186028 - MIR SINE MIR -56 206 11 6 1580 396 0 0 0 chrX 130464667 130464711 -36185585 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 1580 986 289 24 41 chrX 130466759 130467051 -36183245 + B4 SINE B4 2 288 -4 6 1580 236 30 30 0 chrX 130467394 130467427 -36182869 + (CCA)n Simple_repeat Simple_repeat 1 34 0 6 1580 1054 49 0 20 chrX 130467607 130467754 -36182542 + (TTCC)n Simple_repeat Simple_repeat 3 146 0 6 1580 486 0 0 0 chrX 130467754 130467808 -36182488 + (TTTCC)n Simple_repeat Simple_repeat 5 58 0 6 1580 819 50 25 8 chrX 130467808 130467929 -36182367 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 6 1580 466 310 23 56 chrX 130468246 130468461 -36181835 - MIR SINE MIR -21 241 34 6 1580 4212 88 174 86 chrX 130468927 130469760 -36180536 - RMER17A2 LTR ERVK 0 906 1 6 1580 205 353 17 8 chrX 130470054 130470171 -36180125 + CT-rich Low_complexity Low_complexity 1 118 0 6 1580 306 73 0 0 chrX 130472313 130472354 -36177942 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1580 362 311 0 9 chrX 130473007 130473114 -36177182 - PB1D9 SINE Alu 0 120 15 7 1580 200 299 40 30 chrX 130473194 130473294 -36177002 - L2c LINE L2 0 3387 3287 7 1580 191 379 113 5 chrX 130473316 130473520 -36176776 - L2c LINE L2 -372 3047 2822 7 1580 252 44 0 0 chrX 130473602 130473647 -36176649 + Lx LINE L1 6610 6654 0 7 1580 591 230 23 57 chrX 130473720 130473895 -36176401 - RMER30 DNA MER1_type -32 170 2 7 1580 323 288 73 0 chrX 130474274 130474380 -36175916 + PB1D10 SINE Alu 3 124 -3 7 1580 248 171 0 0 chrX 130474694 130474735 -36175561 + L2a LINE L2 3379 3419 -7 7 1580 258 32 0 0 chrX 130476859 130476890 -36173406 + (TATG)n Simple_repeat Simple_repeat 2 32 0 7 1580 428 282 144 36 chrX 130477129 130477324 -36172972 - ID_B1 SINE B4 -6 218 3 7 1580 528 243 28 14 chrX 130477374 130477516 -36172780 - B1F SINE Alu -5 144 1 7 1580 434 282 0 0 chrX 130478294 130478404 -36171892 + PB1D10 SINE Alu 1 110 -7 7 1580 269 301 0 40 chrX 130479312 130479324 -36170972 - ID4_ SINE ID -1 82 10 7 1580 282 266 0 0 chrX 130479324 130479388 -36170908 - tRNA-Ala-GCA tRNA tRNA -8 67 4 7 1580 31 26 0 0 chrX 130479925 130479963 -36170333 + AT_rich Low_complexity Low_complexity 1 38 0 7 1580 282 288 27 0 chrX 130480539 130480612 -36169684 + ID4 SINE ID 1 75 -8 7 1580 25 0 0 0 chrX 130480684 130480709 -36169587 + AT_rich Low_complexity Low_complexity 1 25 0 7 1580 1852 127 0 7 chrX 130481135 130481421 -36168875 + Lx3A LINE L1 6686 6969 -12 7 1580 234 0 0 0 chrX 130481421 130481447 -36168849 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 7 1580 246 306 66 22 chrX 130481734 130481871 -36168425 - MIRc SINE MIR -122 146 4 7 1580 374 256 11 22 chrX 130482793 130482885 -36167411 - RSINE1 SINE B4 0 165 75 7 1580 558 267 50 0 chrX 130482909 130483070 -36167226 - B3 SINE B2 0 216 48 7 1580 189 107 0 0 chrX 130484880 130484908 -36165388 + (TCC)n Simple_repeat Simple_repeat 3 30 0 7 1580 372 22 0 0 chrX 130485011 130485056 -36165240 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1580 472 300 0 28 chrX 130485241 130485385 -36164911 - RSINE1 SINE B4 -17 148 9 7 1580 382 120 13 13 chrX 130486182 130486258 -36164038 + (GGGA)n Simple_repeat Simple_repeat 3 78 0 7 1580 281 186 300 0 chrX 130487131 130487201 -36163095 - B1F2 SINE Alu -57 92 2 7 1580 731 242 66 15 chrX 130487243 130487440 -36162856 - B3 SINE B2 0 216 10 7 1580 887 306 62 26 chrX 130487440 130487894 -36162402 + L1MB5 LINE L1 5704 6173 -1 7 1580 354 329 128 29 chrX 130488088 130488217 -36162079 + L2a LINE L2 3041 3197 -229 7 1580 279 0 0 0 chrX 130488217 130488248 -36162048 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 1580 354 329 128 29 chrX 130488248 130488469 -36161827 + L2a LINE L2 3198 3425 -1 7 1580 188 296 158 12 chrX 130488925 130489007 -36161289 + MIR3 SINE MIR 82 175 -33 7 1580 256 317 46 75 chrX 130489458 130489632 -36160664 - L1ME1 LINE L1 -104 6075 5907 7 1580 590 191 9 0 chrX 130489703 130489813 -36160483 - B1_Mur1 SINE Alu 0 149 39 7 1580 638 271 84 12 chrX 130489813 130490085 -36160211 - L1ME2z LINE L1 -318 5985 5695 7 1580 1484 266 78 13 chrX 130490078 130490631 -36159665 + L1M2 LINE L1 4223 4811 -1332 7 1580 613 276 22 50 chrX 130490653 130490832 -36159464 + Lx8 LINE L1 6460 6633 -840 7 1580 927 123 204 21 chrX 130490877 130491068 -36159228 + URR1A DNA MER1_type 1 226 0 7 1580 1267 275 48 40 chrX 130491068 130491447 -36158849 + Lx8 LINE L1 6732 7113 -360 7 1580 215 177 0 16 chrX 130491457 130491520 -36158776 + GA-rich Low_complexity Low_complexity 3 64 0 7 1580 820 261 120 17 chrX 130491686 130492087 -36158209 - L1ME2z LINE L1 -488 5691 5246 7 1580 260 287 108 74 chrX 130492616 130492819 -36157477 + B4A SINE B4 83 292 0 7 1580 970 241 0 5 chrX 130492976 130493180 -36157116 + B3 SINE B2 1 203 -13 7 1580 281 273 75 54 chrX 130493325 130493472 -36156824 + L1MA5 LINE L1 6145 6294 -6 7 1580 393 212 25 0 chrX 130493485 130493565 -36156731 + BC1_Mm scRNA scRNA 2 83 -69 7 1580 23 33 0 0 chrX 130493574 130493604 -36156692 + AT_rich Low_complexity Low_complexity 1 30 0 7 1580 378 91 0 0 chrX 130493661 130493716 -36156580 + (TA)n Simple_repeat Simple_repeat 2 56 0 7 1580 964 260 74 61 chrX 130494289 130494764 -36155532 + HAL1b LINE L1 1034 1514 -495 7 1580 612 223 29 55 chrX 130494784 130494970 -36155326 + B3A SINE B2 36 193 -2 7 1580 222 37 0 0 chrX 130495071 130495098 -36155198 + (TCC)n Simple_repeat Simple_repeat 3 29 0 7 1580 2550 138 0 31 chrX 130495693 130496112 -36154184 + MTB_Mm LTR MaLR 1 406 -1 7 1580 322 272 22 0 chrX 130497387 130497479 -36152817 - L2c LINE L2 -7 3380 3287 7 1580 413 307 26 78 chrX 130497687 130497878 -36152418 - B3A SINE B2 -16 182 2 7 1580 521 266 16 50 chrX 130497931 130498113 -36152183 + ID_B1 SINE B4 49 224 0 7 1580 243 320 85 60 chrX 130498120 130498439 -36151857 + L1M5 LINE L1 2589 2915 -3231 7 1580 691 237 136 20 chrX 130499240 130499438 -36150858 - Lx6 LINE L1 0 7460 7240 7 1580 27 29 0 0 chrX 130499455 130499489 -36150807 + AT_rich Low_complexity Low_complexity 1 34 0 7 1580 201 283 57 0 chrX 130499519 130499572 -36150724 + MIRb SINE MIR 47 102 -166 7 1580 386 272 109 23 chrX 130500039 130500167 -36150129 + MIR SINE MIR 3 141 -121 1 1580 1456 297 132 42 chrX 130500940 130502381 -36147915 + L1MEc LINE L1 41 1611 -4789 2 1580 425 317 66 6 chrX 130502422 130502603 -36147693 + B3A SINE B2 1 192 -6 3 1580 280 359 11 0 chrX 130503324 130503416 -36146880 + Lx8 LINE L1 6218 6310 -1163 4 1580 1013 68 8 0 chrX 130503416 130503549 -36146747 + B2_Mm2 SINE B2 23 156 -39 5 1580 180 0 0 0 chrX 130503550 130503570 -36146726 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 6 1580 345 100 0 0 chrX 130503851 130503901 -36146395 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 1580 276 30 0 0 chrX 130504281 130504314 -36145982 + (TG)n Simple_repeat Simple_repeat 1 33 0 8 1580 376 318 116 12 chrX 130504492 130504731 -36145565 + MIRb SINE MIR 1 260 -8 9 1580 506 276 8 39 chrX 130504753 130504881 -36145415 - L4 LINE RTE -754 1275 1152 1 1580 729 261 59 34 chrX 130505456 130505694 -36144602 - MIR SINE MIR -6 256 13 1 1580 212 374 122 0 chrX 130506527 130506557 -36143739 + B4 SINE B4 50 93 -199 1 1580 423 250 21 11 chrX 130506557 130506650 -36143646 + PB1D10 SINE Alu 3 96 -21 1 1580 214 188 19 94 chrX 130506676 130506729 -36143567 + ID4 SINE ID 18 66 -17 1 1580 325 263 31 24 chrX 130507806 130507908 -36142388 + L2a LINE L2 3271 3422 -4 1 1580 21 0 0 0 chrX 130509040 130509061 -36141235 + AT_rich Low_complexity Low_complexity 1 21 0 1 1580 2012 184 32 24 chrX 130509121 130509623 -36140673 - ETnERV2-int LTR ERVK -5503 1903 1398 1 1580 395 221 0 0 chrX 130509705 130509782 -36140514 - B3A SINE B2 -121 77 1 1 1580 326 289 0 0 chrX 130510964 130511040 -36139256 + ID4 SINE ID 7 82 -1 1 1580 433 245 259 60 chrX 130511398 130511638 -36138658 + B4A SINE B4 5 292 0 2 1580 541 158 6 204 chrX 130511650 130511817 -36138479 - RMER13A LTR ERVK -726 134 1 2 1580 704 363 69 23 chrX 130511891 130512370 -36137926 - L2 LINE L2 -718 2701 2201 2 1580 491 304 7 7 chrX 130512924 130513060 -36137236 + B1F SINE Alu 2 137 -12 2 1580 186 43 0 0 chrX 130513139 130513162 -36137134 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2 1580 225 325 116 39 chrX 130513227 130513404 -36136892 - L2a LINE L2 0 3426 3227 2 1580 819 154 278 0 chrX 130513404 130513566 -36136730 + B3 SINE B2 1 207 -9 2 1580 225 325 116 39 chrX 130513566 130513647 -36136649 - L2a LINE L2 -200 3226 3148 2 1580 183 306 15 61 chrX 130513764 130513830 -36136466 - L2b LINE L2 -86 3289 3227 2 1580 21 0 0 0 chrX 130513999 130514020 -36136276 + GC_rich Low_complexity Low_complexity 1 21 0 2 1580 206 327 56 28 chrX 130514496 130514603 -36135693 + MIRb SINE MIR 90 199 -69 2 1580 491 211 138 15 chrX 130515050 130515180 -36135116 + B1F SINE Alu 4 149 0 3 1580 195 42 0 0 chrX 130516684 130516708 -36133588 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1580 223 350 171 62 chrX 130517473 130518006 -36132290 + L2 LINE L2 1908 2498 -921 3 1580 313 321 100 43 chrX 130518258 130518587 -36131709 + L1ME4a LINE L1 5765 6112 -12 3 1580 1076 239 10 0 chrX 130518618 130518823 -36131473 - B3 SINE B2 -9 207 1 3 1580 22 56 0 0 chrX 130518835 130518871 -36131425 + AT_rich Low_complexity Low_complexity 1 36 0 3 1580 2246 284 121 37 chrX 130519562 130520682 -36129614 + Lx9 LINE L1 6120 7334 -310 3 1580 709 196 38 22 chrX 130520682 130520853 -36129443 + ORR1D1 LTR MaLR 216 379 0 3 1580 703 274 21 17 chrX 130521072 130521306 -36128990 + Lx7 LINE L1 7048 7282 -414 3 1580 312 27 0 0 chrX 130521326 130521363 -36128933 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1580 183 42 0 0 chrX 130521420 130521444 -36128852 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1580 694 303 159 16 chrX 130521575 130521833 -36128463 - MLT1C LTR MaLR 0 467 173 4 1580 1248 291 30 30 chrX 130521977 130522444 -36127852 - Lx9 LINE L1 -215 7429 6963 4 1580 655 205 119 0 chrX 130522445 130522596 -36127700 - MLT1C LTR MaLR -297 170 2 4 1580 1083 276 63 9 chrX 130522670 130522973 -36127323 - L1MB8 LINE L1 -351 5827 5516 4 1580 815 0 11 0 chrX 130522973 130523068 -36127228 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 4 1580 1083 276 63 9 chrX 130523068 130523291 -36127005 - L1MB8 LINE L1 -663 5515 5274 4 1580 196 317 59 35 chrX 130523893 130523978 -36126318 - L2b LINE L2 -13 3362 3276 4 1580 272 218 136 19 chrX 130524082 130524185 -36126111 - MIR SINE MIR -60 202 88 4 1580 297 51 0 0 chrX 130524300 130524339 -36125957 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1580 904 41 16 0 chrX 130524591 130524712 -36125584 + (GA)n Simple_repeat Simple_repeat 2 124 0 4 1580 666 75 0 0 chrX 130524715 130524808 -36125488 + (GGGGA)n Simple_repeat Simple_repeat 4 96 0 4 1580 252 0 0 0 chrX 130525093 130525121 -36125175 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 5 1580 237 98 0 0 chrX 130525434 130525475 -36124821 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 5 1580 1047 61 0 0 chrX 130525553 130525701 -36124595 + (TC)n Simple_repeat Simple_repeat 1 148 0 5 1580 229 258 88 22 chrX 130525711 130525802 -36124494 - ORR1E LTR MaLR -196 163 67 5 1580 1279 136 9 52 chrX 130525862 130526095 -36124201 + URR1A DNA MER1_type 1 223 -3 5 1580 396 259 199 48 chrX 130526578 130526829 -36123467 + L2c LINE L2 2920 3208 -179 5 1580 614 285 111 25 chrX 130527049 130527247 -36123049 + MER20 DNA MER1_type 4 218 -1 5 1580 197 273 36 0 chrX 130527607 130527662 -36122634 - MIRb SINE MIR -30 238 182 5 1580 287 285 0 3 chrX 130527877 130527957 -36122339 + ID4_ SINE ID 23 101 -51 5 1580 533 260 44 59 chrX 130528321 130528456 -36121840 + ID_B1 SINE B4 81 213 -11 5 1580 180 0 0 0 chrX 130529342 130529362 -36120934 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 6 1580 544 331 0 25 chrX 130529472 130529630 -36120666 + RSINE1 SINE B4 6 159 -6 6 1580 22 0 0 0 chrX 130529630 130529652 -36120644 + AT_rich Low_complexity Low_complexity 1 22 0 6 1580 22 0 0 0 chrX 130529853 130529875 -36120421 + AT_rich Low_complexity Low_complexity 1 22 0 6 1580 229 277 130 26 chrX 130531213 130531328 -36118968 - LTR33 LTR ERVL -2 513 387 6 1580 753 278 82 76 chrX 130531617 130532012 -36118284 + MTE2a LTR MaLR 11 405 -14 6 1580 569 283 146 5 chrX 130532239 130532445 -36117851 + MER21B LTR ERV1 329 563 -300 6 1580 267 54 0 0 chrX 130532447 130532484 -36117812 + (GTTTG)n Simple_repeat Simple_repeat 3 39 0 6 1580 280 268 0 27 chrX 130532485 130532558 -36117738 - ID4 SINE ID -10 73 3 6 1580 786 306 10 20 chrX 130532558 130532756 -36117540 + MER21B LTR ERV1 547 742 -121 6 1580 442 0 35 0 chrX 130532789 130532847 -36117449 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 1580 2022 297 90 25 chrX 130532994 130533920 -36116376 + MER4B-int LTR ERV1 3084 4069 -2689 7 1580 303 260 39 13 chrX 130533982 130534060 -36116236 + ID SINE ID 4 83 -141 7 1580 1188 296 36 25 chrX 130534194 130534752 -36115544 + MER4B-int LTR ERV1 4124 4687 -2071 7 1580 306 0 0 0 chrX 130534804 130534838 -36115458 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7 1580 1357 131 37 0 chrX 130534912 130535126 -36115170 - Lx4A LINE L1 -5 7053 6832 7 1580 673 263 88 11 chrX 130535128 130535412 -36114884 - L1MB1 LINE L1 -83 6106 5801 7 1580 655 293 19 8 chrX 130535416 130535674 -36114622 - L1M3 LINE L1 -566 5746 5486 7 1580 505 242 133 0 chrX 130535724 130535844 -36114452 - RSINE1 SINE B4 -19 146 11 7 1580 303 28 0 0 chrX 130535902 130535938 -36114358 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 7 1580 444 67 0 0 chrX 130535953 130536013 -36114283 + (TG)n Simple_repeat Simple_repeat 1 60 0 7 1580 615 255 35 45 chrX 130536019 130536190 -36114106 - ID_B1 SINE B4 -54 238 70 7 1580 1085 248 65 20 chrX 130536208 130536663 -36113633 - L1M3 LINE L1 -766 5418 4936 7 1580 3273 269 91 22 chrX 130536687 130537925 -36112371 - Lx8 LINE L1 -9 7464 6141 8 1580 225 260 0 151 chrX 130538014 130538100 -36112196 + ID4 SINE ID 4 76 -7 8 1580 519 282 190 8 chrX 130538205 130538447 -36111849 + B4A SINE B4 7 292 0 8 1580 496 157 156 50 chrX 130538447 130538588 -36111708 + RMER1B Other Other 899 1054 -12 8 1580 1677 29 0 24 chrX 130538713 130538926 -36111370 + L1Md_F3 LINE L1 6363 6570 -14 8 1580 887 121 31 25 chrX 130538928 130539089 -36111207 + L1Md_F2 LINE L1 6409 6570 -12 8 1580 352 306 91 27 chrX 130540519 130540815 -36109481 + L1MC4 LINE L1 6532 6846 -1196 8 1580 270 272 101 31 chrX 130540887 130541016 -36109280 - Lx9 LINE L1 -2 7471 7334 8 1580 42 36 0 0 chrX 130541016 130541072 -36109224 + AT_rich Low_complexity Low_complexity 1 56 0 8 1580 416 332 8 7 chrX 130541166 130541359 -36108937 - Lx9 LINE L1 -206 7438 7133 8 1580 591 76 0 0 chrX 130541415 130541494 -36108802 + L1_Mus2 LINE L1 6169 6247 -319 8 1580 2260 181 78 13 chrX 130541494 130541969 -36108327 - Lx9 LINE L1 -833 6811 6306 9 1580 1366 169 103 166 chrX 130542047 130542494 -36107802 - MTD LTR MaLR 0 419 1 9 1580 22 0 0 0 chrX 130542554 130542576 -36107720 + AT_rich Low_complexity Low_complexity 1 22 0 9 1580 304 319 10 52 chrX 130542617 130542713 -36107583 - MLT2F LTR ERVL -394 269 178 9 1580 466 241 0 0 chrX 130542779 130542862 -36107434 + ID SINE ID 2 84 -140 9 1580 349 83 0 20 chrX 130542868 130542917 -36107379 - ORR1A3-int LTR MaLR -10 1953 1906 9 1580 749 50 0 0 chrX 130542917 130543016 -36107280 + MERVL-int LTR ERVL 5273 5371 -114 9 1580 371 111 26 53 chrX 130543016 130543092 -36107204 + ORR1A3-int LTR MaLR 567 640 -1323 9 1580 302 0 0 0 chrX 130543092 130543130 -36107166 + MERVL-int LTR ERVL 5448 5485 0 9 1580 2274 39 0 3 chrX 130543130 130543415 -36106881 + MT2_Mm LTR ERVL 1 284 -209 9 1580 7549 98 13 8 chrX 130543411 130544524 -36105772 - ORR1A3-int LTR MaLR -55 1908 791 9 1580 403 234 96 0 chrX 130544466 130544560 -36105736 - B1_Mus1 SINE Alu -22 126 24 9 1580 1309 65 18 0 chrX 130544566 130544736 -36105560 - ORR1A2 LTR MaLR -154 173 1 9 1580 1265 34 0 0 chrX 130545274 130545421 -36104875 + B1_Mus2 SINE Alu 1 147 0 1 1580 283 228 74 32 chrX 130545588 130545683 -36104613 + ERVL-int LTR ERVL 2538 2636 -2360 1 1580 276 301 97 80 chrX 130546032 130546313 -36103983 - ORR1D1 LTR MaLR 0 374 69 1 1580 412 411 24 14 chrX 130546365 130546789 -36103507 + ERVL-int LTR ERVL 3055 3482 -2275 1 197 1934 300 119 31 chrX 130546812 130548003 -36102293 + L1M4b LINE L1 69 1364 -5970 1 1581 224 232 0 0 chrX 130548689 130548745 -36101551 + A-rich Low_complexity Low_complexity 1 56 0 1 1581 993 92 28 0 chrX 130548870 130549011 -36101285 + L1_Mus2 LINE L1 6421 6565 -1 1 1581 216 0 0 0 chrX 130549023 130549047 -36101249 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1581 435 268 58 42 chrX 130549156 130549754 -36100542 + Lx9 LINE L1 1216 1741 -4139 1 1581 526 249 148 30 chrX 130549806 130550009 -36100287 + Lx7 LINE L1 6805 7031 -665 1 1581 4113 126 0 6 chrX 130550014 130550638 -36099658 + Lx3A LINE L1 6362 6981 0 1 1581 658 244 37 37 chrX 130550664 130551013 -36099283 + L1_Mur3 LINE L1 3004 3352 -2528 1 1581 978 298 122 37 chrX 130551043 130551667 -36098629 + L1_Rod LINE L1 5044 5720 -127 1 1581 424 288 80 38 chrX 130551669 130551882 -36098414 + L1M4b LINE L1 1348 1569 -5765 1 1581 24 0 0 0 chrX 130551932 130551956 -36098340 + AT_rich Low_complexity Low_complexity 1 24 0 1 1581 531 256 18 6 chrX 130551981 130552150 -36098146 + Lx8 LINE L1 6929 7099 -374 1 1581 343 214 71 0 chrX 130552153 130552237 -36098059 - Lx7 LINE L1 -615 7081 6992 1 1581 646 298 42 27 chrX 130552375 130552511 -36097785 - L1M4c LINE L1 -4696 2154 2073 1 1581 633 291 19 28 chrX 130552511 130552727 -36097569 - ID_B1 SINE B4 -10 214 1 1 1581 646 305 59 55 chrX 130552727 130553246 -36097050 - L1M4c LINE L1 -4778 2072 1544 1 1581 180 111 0 0 chrX 130553403 130553430 -36096866 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 1 1581 315 0 0 0 chrX 130553430 130553465 -36096831 + (CAAT)n Simple_repeat Simple_repeat 2 36 0 1 1581 245 51 0 25 chrX 130553595 130553635 -36096661 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1581 666 264 112 41 chrX 130553863 130554232 -36096064 - L1M4 LINE L1 -487 5697 5304 1 1581 509 296 15 0 chrX 130554232 130554364 -36095932 + ID_B1 SINE B4 82 215 -9 1 1581 474 277 134 116 chrX 130554405 130554815 -36095481 - L1M4 LINE L1 -880 5266 4796 1 1581 491 0 17 0 chrX 130554815 130554874 -36095422 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 1581 474 277 134 116 chrX 130554874 130554899 -36095397 - L1M4 LINE L1 -1351 4795 4795 1 1581 594 266 93 5 chrX 130554899 130555092 -36095204 - ID_B1 SINE B4 -12 212 3 1 1581 474 277 134 116 chrX 130555092 130555317 -36094979 - L1M4 LINE L1 -1351 4795 4593 1 1581 1378 265 112 30 chrX 130555329 130555802 -36094494 - L1M4 LINE L1 -1933 4213 3687 1 1581 884 149 7 39 chrX 130555802 130555956 -36094340 - B1_Mur4 SINE Alu 0 150 2 1 1581 1378 265 112 30 chrX 130555956 130556378 -36093918 - L1M4 LINE L1 -2460 3686 3245 1 1581 476 125 287 16 chrX 130556759 130556881 -36093415 + Lx4B LINE L1 6903 7057 -1 1 1581 240 35 0 0 chrX 130556895 130556924 -36093372 + (GGA)n Simple_repeat Simple_repeat 1 29 0 1 1581 465 286 88 0 chrX 130557062 130557209 -36093087 + Tigger7 DNA MER2_type 2331 2490 -1 1 1581 3198 57 30 92 chrX 130557493 130557958 -36092338 - RLTR10C LTR ERVK 0 436 1 1 1581 2144 229 0 8 chrX 130557959 130558354 -36091942 + MTD LTR MaLR 27 418 -1 1 1581 456 220 19 0 chrX 130558425 130558584 -36091712 + GA-rich Low_complexity Low_complexity 5 166 0 1 1581 964 217 63 0 chrX 130558948 130559137 -36091159 - B3 SINE B2 -1 215 15 1 1581 329 231 29 0 chrX 130560228 130560332 -36089964 - Lx8 LINE L1 -9 7464 7358 1 1581 1748 260 148 14 chrX 130560568 130561196 -36089100 + Lx8 LINE L1 6309 7020 -453 1 1581 409 250 0 0 chrX 130561831 130561911 -36088385 + ID4 SINE ID 3 82 -1 1 1581 506 231 86 71 chrX 130561923 130562063 -36088233 - B1F2 SINE Alu -5 144 3 1 1581 841 287 55 34 chrX 130562094 130562566 -36087730 - Lx8 LINE L1 -2 7471 6990 1 1581 645 209 8 23 chrX 130562573 130562705 -36087591 - B1_Mur2 SINE Alu -15 134 5 1 1581 727 259 26 8 chrX 130562721 130562955 -36087341 - Lx7 LINE L1 -1676 6020 5783 1 1581 438 351 56 47 chrX 130563021 130563254 -36087042 + MT2A LTR ERVL 225 459 -74 1 1581 288 146 21 0 chrX 130563254 130563302 -36086994 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1581 969 172 0 0 chrX 130563304 130563484 -36086812 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 1581 214 262 94 59 chrX 130563958 130564043 -36086253 - MIRb SINE MIR -62 206 119 1 1581 299 111 55 18 chrX 130564278 130564333 -36085963 - PB1D10 SINE Alu -8 109 53 1 1581 806 234 47 40 chrX 130564474 130564795 -36085501 + L1MC3 LINE L1 7460 7782 -3 1 1581 451 318 136 16 chrX 130565412 130565710 -36084586 + L1M4c LINE L1 1281 1611 -5035 1 1581 1145 111 35 0 chrX 130565743 130565914 -36084382 + B2_Mm1t SINE B2 3 179 -14 1 1581 406 106 0 5 chrX 130565946 130566011 -36084285 + B2_Mm2 SINE B2 47 109 -107 1 1581 413 266 43 19 chrX 130566050 130566211 -36084085 + L1M4c LINE L1 1625 1789 -4857 1 1581 288 301 68 20 chrX 130566380 130566526 -36083770 + L1M4c LINE L1 1915 2067 -4673 1 1581 259 247 49 0 chrX 130566710 130566791 -36083505 + L1M2 LINE L1 4282 4366 -1774 1 1581 6310 162 42 16 chrX 130566862 130568017 -36082279 - Lx5 LINE L1 -4 7046 5861 1 1581 1436 127 60 4 chrX 130568017 130568285 -36082011 - L1_Mur2 LINE L1 -4330 1547 1265 1 1581 288 77 0 0 chrX 130568287 130568326 -36081970 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1581 2407 75 6 28 chrX 130568332 130568690 -36081606 - L1Md_F2 LINE L1 -20 6562 6213 1 1581 31995 64 2 43 chrX 130568664 130574046 -36076250 - L1Md_F LINE L1 -136 5747 623 1 1581 504 131 0 0 chrX 130574036 130574135 -36076161 - L1_Mur2 LINE L1 -5813 1273 1175 1 1581 277 241 9 61 chrX 130574156 130574271 -36076025 + RMER1B Other Other 919 1027 -39 1 1581 1115 174 22 9 chrX 130574279 130574511 -36075785 - L1_Mur2 LINE L1 -5964 1122 888 1 1581 292 275 88 28 chrX 130574812 130575029 -36075267 + L1M2 LINE L1 4395 4624 -1519 1 1581 315 0 0 0 chrX 130575052 130575087 -36075209 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1 1581 247 367 11 63 chrX 130575339 130575528 -36074768 - RMER4B LTR ERVK -399 186 8 1 1581 659 283 32 32 chrX 130575605 130575776 -36074520 + Lx8 LINE L1 7187 7355 -118 1 1581 642 201 44 7 chrX 130575776 130575911 -36074385 + B1_Mur1 SINE Alu 2 141 -8 1 1581 659 283 32 32 chrX 130575911 130576020 -36074276 + Lx8 LINE L1 7356 7467 -6 1 1581 691 243 48 29 chrX 130576092 130576300 -36073996 + Lx8 LINE L1 6712 6923 -550 1 1581 750 105 111 15 chrX 130576301 130576436 -36073860 + RMER6A LTR ERVK 1 148 -608 1 1581 579 266 51 111 chrX 130576440 130576656 -36073640 - RLTR23 LTR ERV1 -4 426 224 1 1581 490 236 33 73 chrX 130576755 130576906 -36073390 - RLTR23 LTR ERV1 -278 152 8 1 1581 2188 178 36 48 chrX 130576928 130577462 -36072834 + RMER6A LTR ERVK 145 729 -27 1 1581 2575 172 128 5 chrX 130577462 130578018 -36072278 + RMER12 LTR ERVK 1 624 -698 1 1581 252 29 29 0 chrX 130578032 130578067 -36072229 + RMER12 LTR ERVK 564 599 -723 1 1581 413 95 16 0 chrX 130578069 130578132 -36072164 + RMER12 LTR ERVK 564 627 -695 1 1581 243 57 29 0 chrX 130578143 130578178 -36072118 + RMER12 LTR ERVK 564 599 -723 1 1581 377 143 16 0 chrX 130578180 130578243 -36072053 + RMER12 LTR ERVK 564 627 -695 1 1581 349 172 0 45 chrX 130578254 130578321 -36071975 + RMER12 LTR ERVK 564 627 -695 1 1581 400 111 16 0 chrX 130578373 130578436 -36071860 + RMER12 LTR ERVK 564 627 -695 1 1581 349 172 0 45 chrX 130578447 130578514 -36071782 + RMER12 LTR ERVK 564 627 -695 1 1581 346 127 15 60 chrX 130578488 130578555 -36071741 + RMER12 LTR ERVK 564 627 -695 1 1581 374 141 0 45 chrX 130578525 130578592 -36071704 + RMER12 LTR ERVK 564 627 -695 1 1581 377 143 16 0 chrX 130578603 130578666 -36071630 + RMER12 LTR ERVK 564 627 -695 1 1581 374 143 16 0 chrX 130578640 130578703 -36071593 + RMER12 LTR ERVK 564 627 -695 1 1581 377 143 16 0 chrX 130578714 130578777 -36071519 + RMER12 LTR ERVK 564 627 -695 1 1581 348 172 0 45 chrX 130578788 130578855 -36071441 + RMER12 LTR ERVK 564 627 -695 1 1581 345 127 15 60 chrX 130578829 130578896 -36071400 + RMER12 LTR ERVK 564 627 -695 1 1581 1582 176 20 82 chrX 130578907 130579262 -36071034 + RMER12 LTR ERVK 564 885 -437 1 1581 198 0 0 0 chrX 130579262 130579284 -36071012 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 1581 414 0 0 0 chrX 130579284 130579329 -36070967 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 1581 484 289 221 26 chrX 130579329 130579391 -36070905 + RMER12 LTR ERVK 1293 1357 -215 1 1581 291 149 0 0 chrX 130579391 130579438 -36070858 + L1Md_F3 LINE L1 6077 6123 -461 1 1581 819 51 103 0 chrX 130579438 130579555 -36070741 + B1_Mm SINE Alu 19 147 0 1 1581 197 77 51 0 chrX 130579555 130579594 -36070702 + (CAAAAA)n Simple_repeat Simple_repeat 6 46 0 1 1581 669 226 7 28 chrX 130579667 130579808 -36070488 - RLTR19C LTR ERVK 0 506 369 1 1581 2213 89 2 61 chrX 130579808 130580203 -36070093 + RLTR19-int LTR ERVK 989 1360 -4777 1 1581 6182 48 14 1 chrX 130580210 130580981 -36069315 + L1Md_F2 LINE L1 5792 6572 -10 1 1581 477 333 122 21 chrX 130581869 130582246 -36068050 + MLT1C LTR MaLR 53 467 0 1 1581 2770 107 13 15 chrX 130582838 130583313 -36066983 + RLTR19-int LTR ERVK 1352 1825 -4312 1 1581 2502 178 103 6 chrX 130583316 130583858 -36066438 + RLTR19-int LTR ERVK 5506 6100 -37 1 1581 395 256 47 83 chrX 130583839 130584111 -36066185 + RLTR6-int LTR ERV1 7116 7567 -211 1 1581 433 114 62 109 chrX 130584043 130584171 -36066125 + RLTR19-int LTR ERVK 6016 6137 0 1 1581 3212 162 113 24 chrX 130584172 130584305 -36065991 + RLTR19B LTR ERVK 1 139 -576 1 1581 267 79 0 0 chrX 130584305 130584343 -36065953 + (TTCTG)n Simple_repeat Simple_repeat 1 38 0 1 1581 3212 162 113 24 chrX 130584343 130584865 -36065431 + RLTR19B LTR ERVK 140 713 -2 1 1581 2688 65 3 11 chrX 130584927 130585286 -36065010 + Lx3A LINE L1 6624 6979 -2 1 1581 21 0 0 0 chrX 130585325 130585346 -36064950 + AT_rich Low_complexity Low_complexity 1 21 0 1 1581 1108 217 19 0 chrX 130585511 130585723 -36064573 + B3 SINE B2 1 216 0 1 1581 505 280 17 34 chrX 130585806 130586066 -36064230 + L1MDa LINE L1 2438 2684 -3850 1 1581 2597 63 0 17 chrX 130586312 130586668 -36063628 + L1Md_F2 LINE L1 6221 6570 -12 1 1581 1082 176 260 58 chrX 130589062 130589370 -36060926 - ORR1D1 LTR MaLR -4 370 1 1 1581 258 254 16 0 chrX 130589819 130589882 -36060414 + RLTR19C LTR ERVK 34 97 -409 1 1581 943 216 59 0 chrX 130590981 130591185 -36059111 - B3 SINE B2 0 216 1 1 1581 1224 174 7 128 chrX 130591323 130591627 -36058669 + RMER15 LTR ERVL 1 267 -308 1 1581 406 331 78 124 chrX 130591632 130592047 -36058249 + MLT1E3 LTR MaLR 141 621 -3 1 1581 2672 171 38 14 chrX 130592067 130592564 -36057732 - RLTR18B LTR ERVK -3 509 1 1 1581 288 0 0 0 chrX 130593384 130593416 -36056880 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1581 273 282 0 53 chrX 130593443 130593518 -36056778 - ID4_ SINE ID -11 72 2 1 1581 21 36 0 0 chrX 130593764 130593792 -36056504 + GC_rich Low_complexity Low_complexity 1 28 0 1 1581 261 57 0 0 chrX 130594450 130594485 -36055811 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 1 1581 402 263 141 25 chrX 130594559 130594680 -36055616 + B1F1 SINE Alu 15 149 0 1 1581 360 0 0 0 chrX 130594804 130594844 -36055452 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1581 267 152 0 0 chrX 130596634 130596680 -36053616 + CT-rich Low_complexity Low_complexity 3 48 0 1 1581 307 305 76 0 chrX 130596727 130596832 -36053464 + PB1D7 SINE Alu 1 113 -7 1 1581 252 250 31 0 chrX 130597543 130597607 -36052689 - MIR SINE MIR -57 205 140 2 1581 310 319 83 42 chrX 130597734 130597927 -36052369 + L1ME3B LINE L1 5695 5895 -345 2 1581 720 250 36 56 chrX 130598081 130598276 -36052020 - B3A SINE B2 -6 192 2 2 1581 658 276 14 0 chrX 130598735 130598880 -36051416 + ID_B1 SINE B4 72 218 -6 2 1581 642 271 76 7 chrX 130598890 130599035 -36051261 + RSINE1 SINE B4 2 156 -9 2 1581 660 291 19 44 chrX 130599044 130599202 -36051094 + RSINE1 SINE B4 4 157 -8 2 1581 645 211 44 22 chrX 130599204 130599340 -36050956 - B1_Mur2 SINE Alu -10 139 1 2 1581 292 301 78 71 chrX 130599340 130599450 -36050846 + MT2B LTR ERVL 129 239 -362 2 1581 767 194 22 0 chrX 130599377 130599511 -36050785 + B1_Mus1 SINE Alu 11 147 -1 2 1581 197 291 168 30 chrX 130599552 130599683 -36050613 - MIR SINE MIR -108 168 13 2 1581 295 174 435 0 chrX 130600398 130600513 -36049783 - Lx5 LINE L1 -4 7046 6882 2 1581 407 287 0 47 chrX 130601094 130601200 -36049096 - PB1D10 SINE Alu -7 110 10 2 1581 282 285 159 68 chrX 130601200 130601226 -36049070 - B4A SINE B4 -72 220 77 2 1581 390 367 27 0 chrX 130601238 130601385 -36048911 - MER5C1 DNA MER1_type -112 151 1 2 1581 485 316 96 50 chrX 130601481 130601897 -36048399 + L1MD LINE L1 2674 3108 -3038 2 1581 328 258 0 15 chrX 130601918 130601985 -36048311 + tRNA-Ala-GCY_ tRNA tRNA 2 67 -8 2 1581 325 280 16 47 chrX 130601985 130602057 -36048239 + ID4 SINE ID 8 143 -9 2 1581 1271 104 11 0 chrX 130602345 130602528 -36047768 + B2_Mm1t SINE B2 2 186 -7 2 1581 365 326 40 86 chrX 130602806 130603004 -36047292 - MER5A DNA MER1_type 0 189 1 2 1581 193 283 16 48 chrX 130603018 130603081 -36047215 - MIR SINE MIR -118 144 84 2 1581 1712 315 88 15 chrX 130603381 130604093 -36046203 - MER20B DNA MER1_type -5 778 15 2 1581 650 264 14 88 chrX 130604486 130604702 -36045594 - MER3 DNA MER1_type 0 209 10 2 1581 220 333 39 29 chrX 130605107 130605209 -36045087 - MIR SINE MIR -58 204 102 2 1581 841 193 48 42 chrX 130606478 130606667 -36043629 + B2_Mm2 SINE B2 1 190 -5 2 1581 591 40 0 0 chrX 130606825 130606899 -36043397 + (TG)n Simple_repeat Simple_repeat 2 75 0 2 1581 485 320 72 19 chrX 130608134 130608182 -36042114 - MIR SINE MIR -40 222 167 2 1581 368 247 0 13 chrX 130608182 130608260 -36042036 + ID4 SINE ID 3 79 -4 2 1581 485 320 72 19 chrX 130608260 130608418 -36041878 - MIR SINE MIR -96 166 5 2 1581 868 113 49 0 chrX 130609656 130609798 -36040498 + URR1A DNA MER1_type 78 226 0 2 1581 278 329 68 23 chrX 130610101 130610258 -36040038 - MIR3 SINE MIR -45 231 57 2 1581 286 289 53 0 chrX 130610677 130610753 -36039543 - ID4 SINE ID -2 81 2 2 1581 27 87 0 0 chrX 130610834 130610903 -36039393 + AT_rich Low_complexity Low_complexity 1 69 0 2 1581 499 265 83 0 chrX 130610975 130611107 -36039189 - B1_Mur1 SINE Alu -6 143 1 2 1581 407 274 51 8 chrX 130611255 130611373 -36038923 - MER94 DNA AcHobo -10 124 2 2 1581 2028 162 87 38 chrX 130611652 130612018 -36038278 - ORR1C2 LTR MaLR 0 384 1 2 1581 5209 152 159 12 chrX 130612018 130613079 -36037217 - ORR1C2-int LTR MaLR 0 1509 291 2 1581 1488 115 52 34 chrX 130613079 130613452 -36036844 - ORR1C2 LTR MaLR 0 396 1 2 1581 272 369 67 45 chrX 130613641 130613820 -36036476 - Tigger15a DNA TcMar -370 345 163 2 1581 900 228 18 0 chrX 130614056 130614223 -36036073 + B3 SINE B2 5 174 -42 2 1581 27 49 0 0 chrX 130614223 130614264 -36036032 + AT_rich Low_complexity Low_complexity 1 41 0 2 1581 212 77 26 0 chrX 130614313 130614352 -36035944 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2 1581 424 343 7 56 chrX 130616128 130616270 -36034026 + RSINE1 SINE B4 3 137 -28 2 1581 215 307 143 88 chrX 130616270 130616310 -36033986 + B2_Mm1a SINE B2 2 193 0 2 1581 749 273 71 0 chrX 130616561 130616759 -36033537 - ID_B1 SINE B4 -11 213 2 2 1581 1541 28 45 0 chrX 130616825 130617002 -36033294 - B2_Mm2 SINE B2 -9 186 2 2 1581 234 288 109 33 chrX 130617679 130617862 -36032434 - L1MC4a LINE L1 0 7882 7686 2 1581 845 278 9 114 chrX 130618046 130618371 -36031925 + B4 SINE B4 2 292 0 2 1581 326 296 83 83 chrX 130618383 130618600 -36031696 + MER20 DNA MER1_type 3 219 0 2 1581 395 278 210 42 chrX 130621964 130622178 -36028118 + Lx8 LINE L1 7160 7409 -64 2 1581 539 162 0 43 chrX 130622219 130622335 -36027961 + Lx9 LINE L1 7399 7509 -135 2 1581 244 191 197 17 chrX 130622366 130622483 -36027813 + Lx9 LINE L1 7454 7591 -53 2 1581 4728 42 43 0 chrX 130623421 130623975 -36026321 + L1Md_F2 LINE L1 5991 6568 -14 2 1581 219 301 108 0 chrX 130623987 130624080 -36026216 + MIR SINE MIR 137 239 -23 2 1581 391 262 90 9 chrX 130624218 130624421 -36025875 - L1MB8 LINE L1 0 6184 5959 2 1581 1806 26 0 0 chrX 130624488 130624680 -36025616 + B2_Mm1t SINE B2 2 193 0 2 1581 554 301 56 7 chrX 130624730 130624874 -36025422 - B3A SINE B2 -47 151 1 2 1581 963 264 76 55 chrX 130624876 130625097 -36025199 - L1MB8 LINE L1 -289 5889 5665 2 1581 198 0 0 0 chrX 130625097 130625119 -36025177 + (GA)n Simple_repeat Simple_repeat 1 22 0 2 1581 963 264 76 55 chrX 130625119 130625318 -36024978 - L1MB8 LINE L1 -514 5664 5460 2 1581 204 204 23 0 chrX 130625434 130625478 -36024818 + L2 LINE L2 2102 2146 -1273 2 1581 211 244 0 58 chrX 130625741 130625828 -36024468 + CT-rich Low_complexity Low_complexity 1 82 0 2 1581 278 354 75 50 chrX 130625867 130626108 -36024188 - MIRc SINE MIR -7 261 15 2 1581 491 259 7 92 chrX 130626481 130626634 -36023662 + ID_B1 SINE B4 77 216 -8 2 1581 278 304 31 87 chrX 130626968 130627153 -36023143 - RSINE1 SINE B4 0 165 3 2 1581 205 254 32 0 chrX 130627756 130627819 -36022477 + (TA)n Simple_repeat Simple_repeat 2 66 0 2 1581 28 29 0 0 chrX 130628171 130628206 -36022090 + AT_rich Low_complexity Low_complexity 1 35 0 2 1581 1408 197 125 71 chrX 130628482 130628976 -36021320 + RMER4B LTR ERVK 17 458 -8 2 1581 276 281 189 59 chrX 130629808 130629994 -36020302 - MER102a DNA MER1_type -8 322 115 2 1581 337 175 39 10 chrX 130630064 130630168 -36020128 + (TA)n Simple_repeat Simple_repeat 1 107 0 2 1581 409 235 0 10 chrX 130630339 130630438 -36019858 - L1MA4 LINE L1 -414 5886 5789 2 1581 363 288 117 10 chrX 130630454 130630590 -36019706 - B3 SINE B2 -24 192 55 2 1581 221 339 0 0 chrX 130630668 130630727 -36019569 - ID4 SINE ID -18 65 7 2 1581 242 255 40 145 chrX 130632408 130632532 -36017764 - B4A SINE B4 -157 135 25 2 1581 255 125 0 0 chrX 130632686 130632726 -36017570 + (A)n Simple_repeat Simple_repeat 1 40 0 2 1581 252 0 0 0 chrX 130633511 130633539 -36016757 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1581 1283 307 38 51 chrX 130635505 130635775 -36014521 + L1M2 LINE L1 4508 4769 -1374 2 1581 893 245 72 79 chrX 130635775 130636067 -36014229 + B4A SINE B4 2 291 -1 2 1581 1283 307 38 51 chrX 130636067 130636462 -36013834 + L1M2 LINE L1 4770 5164 -979 2 1581 607 198 9 0 chrX 130636464 130636570 -36013726 + RSINE1 SINE B4 2 108 -57 2 1581 1765 31 0 0 chrX 130636825 130637017 -36013279 + B2_Mm1a SINE B2 1 192 -1 2 1581 340 265 45 22 chrX 130638107 130638279 -36012017 - L1MA4 LINE L1 -238 5918 5767 2 1581 306 317 75 27 chrX 130638319 130638465 -36011831 - MER63D DNA AcHobo -670 391 239 2 1581 1240 153 23 35 chrX 130638819 130639076 -36011220 - Lx7 LINE L1 0 7696 7443 2 1581 286 299 47 0 chrX 130639077 130639184 -36011112 + Lx6 LINE L1 6898 7009 -451 2 1581 525 131 0 0 chrX 130639184 130639268 -36011028 + (GA)n Simple_repeat Simple_repeat 1 84 0 2 1581 1474 207 132 83 chrX 130639268 130639700 -36010596 + Lx7 LINE L1 6976 7428 -268 2 1581 418 234 37 18 chrX 130640488 130640597 -36009699 + Lx7 LINE L1 7101 7211 -485 2 1581 210 292 78 11 chrX 130640671 130640762 -36009534 - MIR SINE MIR -14 254 155 2 1581 2566 90 12 0 chrX 130640762 130641085 -36009211 - ORR1A2 LTR MaLR 0 327 1 2 1581 201 330 83 17 chrX 130641085 130641113 -36009183 - MIRb SINE MIR -111 157 127 2 1581 545 0 15 0 chrX 130641144 130641209 -36009087 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 1581 453 263 70 9 chrX 130641211 130641326 -36008970 - RSINE1 SINE B4 -41 124 3 2 1581 333 264 25 21 chrX 130641352 130641464 -36008832 - ID4 SINE ID -19 133 23 2 1581 320 263 26 13 chrX 130641407 130641484 -36008812 - ID SINE ID -143 81 4 2 1581 240 319 29 0 chrX 130641745 130641814 -36008482 + ID_B1 SINE B4 75 145 -79 2 1581 21 0 0 0 chrX 130641828 130641849 -36008447 + AT_rich Low_complexity Low_complexity 1 21 0 2 1581 255 204 120 20 chrX 130641869 130641969 -36008327 - MER53 DNA hAT -56 137 28 2 1581 285 200 0 32 chrX 130641924 130641986 -36008310 + MER53 DNA hAT 132 191 -2 2 1581 463 265 0 17 chrX 130642073 130642192 -36008104 + PB1D10 SINE Alu 1 117 0 2 1581 431 352 75 8 chrX 130642556 130642635 -36007661 + Cheshire DNA MER1_type 4 82 -2338 2 1581 207 0 0 0 chrX 130642635 130642658 -36007638 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1581 431 352 75 8 chrX 130642658 130642833 -36007463 + Cheshire DNA MER1_type 83 274 -2146 2 1581 589 293 98 13 chrX 130643420 130643655 -36006641 + MIR SINE MIR 2 256 -6 2 1581 219 36 0 0 chrX 130643686 130643714 -36006582 + (CTG)n Simple_repeat Simple_repeat 1 28 0 2 1581 693 0 0 0 chrX 130643714 130643791 -36006505 + (TTC)n Simple_repeat Simple_repeat 3 79 0 2 1581 351 0 0 0 chrX 130643792 130643831 -36006465 + (TCCC)n Simple_repeat Simple_repeat 2 40 0 2 1581 329 281 49 0 chrX 130643921 130644003 -36006293 - PB1 SINE Alu -30 97 12 2 1581 226 349 82 9 chrX 130644689 130644799 -36005497 - MIR SINE MIR -75 133 16 2 1581 491 68 40 0 chrX 130644979 130645053 -36005243 + (GAAAA)n Simple_repeat Simple_repeat 2 78 0 2 1581 333 0 0 0 chrX 130645184 130645221 -36005075 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1581 324 309 135 10 chrX 130645364 130645652 -36004644 + MER33 DNA MER1_type 1 324 0 3 1581 188 245 0 0 chrX 130645657 130645706 -36004590 + MIR3 SINE MIR 157 205 -3 3 1581 954 94 85 8 chrX 130645734 130645863 -36004433 - B1_Mm SINE Alu -8 139 1 3 1581 35 0 0 0 chrX 130646714 130646749 -36003547 + AT_rich Low_complexity Low_complexity 1 35 0 3 1581 665 259 67 103 chrX 130646749 130646973 -36003323 - ID_B1 SINE B4 -4 220 5 3 1581 269 283 113 40 chrX 130647203 130647354 -36002942 - L1ME3B LINE L1 -27 6213 6052 3 1581 456 19 0 0 chrX 130647523 130647576 -36002720 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1581 596 287 72 159 chrX 130648089 130648379 -36001917 - B4A SINE B4 0 292 28 3 1581 516 72 0 0 chrX 130648428 130648497 -36001799 + (TC)n Simple_repeat Simple_repeat 1 69 0 3 1581 463 380 0 0 chrX 130648563 130648705 -36001591 - RSINE1 SINE B4 -18 147 6 3 1581 328 228 141 27 chrX 130648727 130648876 -36001420 - Lx8 LINE L1 -2 7471 7306 3 1581 2400 268 62 56 chrX 130648898 130649684 -36000612 - Lx8 LINE L1 -441 7032 6242 3 1581 325 328 158 3 chrX 130649742 130650039 -36000257 - L1M5 LINE L1 -1161 4985 4643 3 1581 706 200 288 29 chrX 130650171 130650341 -35999955 - B3 SINE B2 0 216 3 3 1581 725 329 36 71 chrX 130650803 130651140 -35999156 - Arthur1B DNA Tip100 -784 441 117 3 1581 232 354 131 15 chrX 130651353 130651551 -35998745 + L3 LINE CR1 4263 4483 -6 3 1581 455 209 23 0 chrX 130652080 130652166 -35998130 - B1_Mur3 SINE Alu 0 149 62 3 1581 253 204 0 85 chrX 130652113 130652172 -35998124 - MT2B LTR ERVL -337 264 211 3 1581 661 173 266 6 chrX 130652325 130652494 -35997802 + Lx6 LINE L1 6531 6743 -717 3 1581 3073 100 8 19 chrX 130652507 130652975 -35997321 - Lx4A LINE L1 -657 6401 5939 3 1581 1367 211 109 0 chrX 130652972 130653275 -35997021 + Lx5 LINE L1 6380 6715 -335 3 1581 2333 122 22 3 chrX 130653275 130653595 -35996701 + ORR1A2 LTR MaLR 2 327 0 3 1581 2468 110 73 18 chrX 130653604 130654001 -35996295 + Lx LINE L1 6231 6649 -5 3 1581 2068 158 34 6 chrX 130653994 130654318 -35995978 + Lx4A LINE L1 6724 7056 -2 3 1581 3932 195 42 6 chrX 130654363 130655048 -35995248 + Lx6 LINE L1 6747 7456 -4 3 1581 800 216 34 73 chrX 130655377 130655501 -35994795 + RMER30 DNA MER1_type 5 119 -83 3 1581 8385 27 13 0 chrX 130655501 130656429 -35993867 + L1Md_F3 LINE L1 5631 6570 -14 3 1581 800 216 34 73 chrX 130656429 130656509 -35993787 + RMER30 DNA MER1_type 120 201 -1 3 1581 418 280 103 20 chrX 130656509 130656651 -35993645 + MLT1D LTR MaLR 344 497 -8 3 1581 232 254 0 0 chrX 130657283 130657350 -35992946 - L1MB4 LINE L1 -2 6178 6112 3 1581 662 290 50 5 chrX 130657350 130657551 -35992745 + B3 SINE B2 1 210 -6 3 1581 1177 295 51 56 chrX 130657556 130658032 -35992264 - L1MB5 LINE L1 -43 6131 5660 3 1581 4271 128 92 7 chrX 130658032 130658727 -35991569 - RMER6A LTR ERVK -2 754 1 3 1581 1177 295 51 56 chrX 130658727 130658835 -35991461 - L1MB5 LINE L1 -515 5659 5550 3 1581 362 321 53 65 chrX 130659059 130659229 -35991067 + LTR40c LTR ERVL 211 378 -87 3 1581 245 235 39 0 chrX 130659242 130659293 -35991003 + LTR40c LTR ERVL 410 462 0 3 1581 1891 88 19 0 chrX 130659370 130659615 -35990681 - L1_Mus2 LINE L1 -126 6441 6192 3 1581 1012 60 0 8 chrX 130659615 130659749 -35990547 + L1_Mus2 LINE L1 6433 6565 -1 3 1581 1891 88 19 0 chrX 130659749 130659764 -35990532 - L1_Mus1 LINE L1 -376 6191 6177 3 1581 835 102 164 8 chrX 130659886 130660014 -35990282 - B1_Mus1 SINE Alu 0 148 1 3 1581 1107 214 24 5 chrX 130660283 130660494 -35989802 + B3 SINE B2 2 216 0 3 1581 437 92 0 38 chrX 130661394 130661473 -35988823 + Lx4A LINE L1 6983 7058 0 3 1581 301 355 130 37 chrX 130662810 130663056 -35987240 - L2a LINE L2 -13 3413 3145 3 1581 2132 198 120 13 chrX 130663097 130663548 -35986748 + RLTR19 LTR ERVK 1 499 0 3 1581 265 208 56 0 chrX 130664060 130664132 -35986164 + MLT1C LTR MaLR 64 139 -328 3 1581 2212 85 42 0 chrX 130664136 130664442 -35985854 - ORR1A2 LTR MaLR -8 319 1 3 1581 394 287 65 22 chrX 130664447 130664586 -35985710 + MLT1C LTR MaLR 152 296 -171 3 1581 873 157 16 0 chrX 130664589 130664837 -35985459 + (CCTG)n Simple_repeat Simple_repeat 1 251 0 3 1581 515 137 0 21 chrX 130664902 130664999 -35985297 + CT-rich Low_complexity Low_complexity 4 98 0 3 1581 2075 278 68 30 chrX 130665078 130665787 -35984509 - Lx8 LINE L1 -24 7449 6714 3 1581 454 267 33 43 chrX 130665870 130666081 -35984215 + L1MA7 LINE L1 6064 6272 -19 3 1581 798 182 79 14 chrX 130666154 130666293 -35984003 + B1_Mur2 SINE Alu 2 149 0 3 1581 234 377 18 30 chrX 130666361 130666528 -35983768 - LTR82B Low_complexity ERVL -602 228 64 3 1581 306 294 62 50 chrX 130666708 130666869 -35983427 - MER104 DNA Tc2 -17 164 2 3 1581 5979 168 40 6 chrX 130667530 130668609 -35981687 + Lx4A LINE L1 5936 7051 -7 3 1581 4609 184 60 28 chrX 130669631 130670560 -35979736 - Lx7 LINE L1 0 7696 6738 3 1581 1811 88 149 27 chrX 130670560 130670889 -35979407 + RLTR23 LTR ERV1 1 369 -61 3 1581 2126 163 0 3 chrX 130670896 130671253 -35979043 - L1_Mm LINE L1 -689 5194 4839 3 1581 1282 121 5 14 chrX 130671253 130671463 -35978833 + L1_Mus4 LINE L1 6429 6636 0 3 1581 415 104 60 0 chrX 130671465 130671532 -35978764 + RLTR23 LTR ERV1 360 430 0 3 1581 1454 169 4 16 chrX 130671532 130671778 -35978518 - Lx6 LINE L1 -730 6730 6488 3 1581 255 250 40 27 chrX 130671954 130672028 -35978268 + L1M4 LINE L1 314 388 -6219 3 1581 321 305 90 69 chrX 130672145 130672434 -35977862 + L1M4 LINE L1 602 896 -5749 3 1581 562 245 49 39 chrX 130672468 130672672 -35977624 + L1MC5 LINE L1 7009 7214 -747 3 1581 724 245 56 24 chrX 130672717 130672930 -35977366 - ID_B1 SINE B4 -3 221 2 3 1581 1098 229 70 15 chrX 130673086 130673357 -35976939 - MTE2b LTR MaLR -20 359 74 3 1581 672 239 0 40 chrX 130673489 130673637 -35976659 + B1_Mur1 SINE Alu 1 142 -7 3 1581 358 267 0 0 chrX 130673962 130674037 -35976259 + ID4_ SINE ID 9 83 0 3 1581 198 324 99 14 chrX 130674776 130674917 -35975379 + L2c LINE L2 2701 2853 -566 3 1581 297 263 140 14 chrX 130674957 130675145 -35975151 + L1MD2 LINE L1 5946 6154 -25 3 1581 255 61 0 0 chrX 130675208 130675241 -35975055 + (TCC)n Simple_repeat Simple_repeat 3 35 0 3 1581 1025 101 7 26 chrX 130675244 130675396 -35974900 - B1_Mur3 SINE Alu 0 149 1 3 1581 322 143 0 0 chrX 130675470 130675519 -35974777 - B1_Mus2 SINE Alu -98 49 1 3 1581 246 356 20 45 chrX 130675667 130675867 -35974429 + L2c LINE L2 3031 3225 -162 3 1581 7767 86 7 31 chrX 130677532 130678478 -35971818 - L1_Mus3 LINE L1 0 6638 5718 3 1581 1223 41 0 0 chrX 130678478 130678625 -35971671 - B1_Mm SINE Alu 0 147 1 3 197 7767 76 10 31 chrX 130678625 130679501 -35970795 - L1_Mus3 LINE L1 -166 5717 4834 3 1582 284 78 59 0 chrX 130680396 130680493 -35969803 - L1MC1 LINE L1 0 6333 6281 3 1582 241 143 20 20 chrX 130680463 130680513 -35969783 - L1MC2 LINE L1 -31 6313 6264 3 1582 448 279 19 0 chrX 130680560 130680664 -35969632 + RSINE1 SINE B4 58 163 -2 3 1582 530 227 23 8 chrX 130680732 130680861 -35969435 + B1F SINE Alu 19 149 0 3 1582 222 313 63 61 chrX 130681185 130681361 -35968935 + MIRb SINE MIR 46 216 -46 3 1582 408 261 78 28 chrX 130681678 130681820 -35968476 + B1F SINE Alu 1 149 0 3 1582 508 239 96 7 chrX 130682991 130683126 -35967170 - Lx8 LINE L1 -148 7325 7179 3 1582 577 277 29 138 chrX 130683787 130684026 -35966270 + ID_B1 SINE B4 1 213 -11 3 1582 1132 70 0 14 chrX 130684251 130684397 -35965899 + B1_Mus1 SINE Alu 1 144 -4 3 1582 1272 72 0 0 chrX 130684598 130684884 -35965412 + (TTAGGG)n Simple_repeat Simple_repeat 1 286 0 3 1582 274 318 28 0 chrX 130686001 130686108 -35964188 + L1MA9 LINE L1 5333 5442 -849 3 1582 1318 285 107 29 chrX 130686145 130686806 -35963490 + L1MA9 LINE L1 5420 6132 -180 3 1582 1630 31 5 10 chrX 130687344 130687538 -35962758 + B2_Mm1t SINE B2 1 193 0 3 1582 553 196 26 26 chrX 130687597 130687712 -35962584 - B1_Mur1 SINE Alu -5 144 30 3 1582 195 320 67 39 chrX 130687844 130687948 -35962348 + L2b LINE L2 3268 3374 -1 3 1582 187 267 181 38 chrX 130688008 130688113 -35962183 + MIRb SINE MIR 96 215 -53 3 1582 305 111 0 36 chrX 130688144 130688200 -35962096 + (TCC)n Simple_repeat Simple_repeat 1 54 0 3 1582 561 293 13 107 chrX 130688372 130688605 -35961691 + B3A SINE B2 1 211 -5 3 1582 798 235 70 15 chrX 130688613 130688812 -35961484 + B3 SINE B2 4 213 -3 3 1582 5842 98 39 14 chrX 130688910 130689751 -35960545 + Lx4A LINE L1 6195 7056 -2 3 1582 24 53 0 0 chrX 130689752 130689790 -35960506 + AT_rich Low_complexity Low_complexity 1 38 0 3 1582 369 0 0 0 chrX 130689861 130689902 -35960394 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1582 267 293 13 0 chrX 130689906 130689981 -35960315 - ID4_ SINE ID -6 77 2 3 1582 23 33 0 0 chrX 130690118 130690148 -35960148 + AT_rich Low_complexity Low_complexity 1 30 0 3 1582 228 130 0 0 chrX 130690245 130690291 -35960005 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 3 1582 447 162 0 0 chrX 130690591 130690671 -35959625 + (TA)n Simple_repeat Simple_repeat 1 80 0 3 1582 181 264 124 22 chrX 130691011 130691100 -35959196 - MER5A DNA MER1_type -37 152 55 3 1582 493 280 42 0 chrX 130691109 130691252 -35959044 + B1F SINE Alu 1 149 0 3 1582 387 141 0 0 chrX 130692414 130692478 -35957818 + (A)n Simple_repeat Simple_repeat 1 64 0 3 1582 1162 58 0 0 chrX 130692479 130692617 -35957679 + B1_Mm SINE Alu 2 139 -8 3 1582 341 256 23 23 chrX 130693360 130693448 -35956848 - RSINE1 SINE B4 0 165 78 3 1582 356 294 128 34 chrX 130693475 130693623 -35956673 - B4A SINE B4 -129 163 2 3 1582 197 65 0 31 chrX 130693796 130693828 -35956468 + (TTATA)n Simple_repeat Simple_repeat 2 32 0 3 1582 346 312 51 25 chrX 130694418 130694576 -35955720 + Charlie8 DNA MER1_type 71 232 -2196 3 1582 227 286 27 41 chrX 130694659 130694732 -35955564 + Charlie8 DNA MER1_type 2352 2423 -5 3 1582 281 133 0 0 chrX 130694738 130694783 -35955513 - MIR3 SINE MIR -49 159 115 3 1582 230 267 40 50 chrX 130694754 130694849 -35955447 - MIRb SINE MIR -119 149 52 4 1582 240 59 0 0 chrX 130695523 130695557 -35954739 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1582 504 0 0 0 chrX 130698059 130698115 -35952181 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 1582 342 253 0 37 chrX 130698359 130698381 -35951915 + B4 SINE B4 72 150 -142 4 1582 398 133 0 0 chrX 130698381 130698441 -35951855 + B1_Mus2 SINE Alu 6 65 -82 4 1582 244 44 67 0 chrX 130698498 130698543 -35951753 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 4 1582 358 153 8 0 chrX 130698553 130698643 -35951653 - PB1D7 SINE Alu 0 120 39 4 1582 1321 214 102 15 chrX 130699819 130700151 -35950145 - MTE2b LTR MaLR -18 361 1 4 1582 326 107 18 0 chrX 130700789 130700845 -35949451 + (TTCC)n Simple_repeat Simple_repeat 4 60 0 4 1582 492 286 66 21 chrX 130701193 130701436 -35948860 - L1MB5 LINE L1 0 6184 5931 4 1582 541 221 50 35 chrX 130701833 130701974 -35948322 - L1MB5 LINE L1 -254 5920 5778 4 1582 919 258 44 41 chrX 130701991 130702310 -35947986 - MLT2D LTR ERVL -87 327 8 4 1582 316 333 47 34 chrX 130702314 130702463 -35947833 + RSINE1 SINE B4 3 153 -12 4 1582 636 14 0 0 chrX 130702469 130702542 -35947754 + (GA)n Simple_repeat Simple_repeat 2 74 0 4 1582 573 15 0 0 chrX 130702542 130702608 -35947688 + (GGA)n Simple_repeat Simple_repeat 3 68 0 4 1582 352 247 11 11 chrX 130702635 130702729 -35947567 - L1MD LINE L1 -491 5751 5658 4 1582 890 261 5 5 chrX 130702733 130702937 -35947359 - B3 SINE B2 -9 207 4 4 1582 354 203 13 13 chrX 130703007 130703082 -35947214 - B4A SINE B4 -2 290 216 4 1582 474 244 87 0 chrX 130703087 130703214 -35947082 - L1MB5 LINE L1 -587 5591 5454 4 1582 510 307 24 0 chrX 130703373 130703500 -35946796 + B1F SINE Alu 18 147 -2 4 1582 446 301 7 43 chrX 130703553 130703692 -35946604 + RSINE1 SINE B4 32 165 0 4 1582 225 356 75 19 chrX 130703838 130703944 -35946352 + LTR16B2 LTR ERVL 11 122 -341 4 1582 752 336 20 17 chrX 130703959 130704256 -35946040 + LTR16B2 LTR ERVL 163 460 -2 4 1582 479 245 43 14 chrX 130704289 130704430 -35945866 + MLT1N2 LTR MaLR 418 562 0 4 1582 1092 210 132 4 chrX 130704559 130704817 -35945479 - MTD LTR MaLR -116 303 13 4 1582 30 0 0 0 chrX 130704817 130704847 -35945449 + AT_rich Low_complexity Low_complexity 1 30 0 4 1582 370 304 99 22 chrX 130705209 130705441 -35944855 - MIR SINE MIR 0 262 13 4 1582 555 273 70 0 chrX 130706021 130706193 -35944103 - MER3 DNA MER1_type -19 190 7 4 1582 195 307 59 42 chrX 130706811 130706930 -35943366 - MIRc SINE MIR -114 154 34 4 1582 3285 114 47 2 chrX 130707583 130708068 -35942228 - Lx4A LINE L1 0 7058 6552 4 1582 247 224 259 0 chrX 130708081 130708139 -35942157 - RSINE1 SINE B4 -85 80 8 4 1582 255 103 0 0 chrX 130708149 130708188 -35942108 + (CCA)n Simple_repeat Simple_repeat 3 41 0 4 1582 302 286 66 9 chrX 130708963 130709069 -35941227 - MIRc SINE MIR -115 153 42 4 1582 794 197 135 11 chrX 130709109 130709231 -35941065 + B3 SINE B2 8 135 -81 4 1582 219 36 0 0 chrX 130709231 130709259 -35941037 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 1582 794 197 135 11 chrX 130709259 130709321 -35940975 + B3 SINE B2 136 214 -2 4 1582 616 237 43 37 chrX 130709486 130709648 -35940648 - RSINE1 SINE B4 0 165 3 4 1582 749 242 72 16 chrX 130709673 130709866 -35940430 - B3 SINE B2 0 216 13 4 1582 370 271 28 18 chrX 130709922 130710031 -35940265 - ID_B1 SINE B4 -15 209 100 4 1582 591 244 7 43 chrX 130710146 130710287 -35940009 + ID_B1 SINE B4 86 221 -3 4 1582 279 296 79 74 chrX 130710395 130710585 -35939711 + Tigger14a DNA MER2_type 43 233 -91 4 1582 483 214 0 10 chrX 130710586 130710685 -35939611 - LTR33 LTR ERVL -3 512 415 4 1582 423 0 0 0 chrX 130710689 130710736 -35939560 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1582 252 385 81 34 chrX 130710741 130711061 -35939235 - LTR33 LTR ERVL -144 371 37 4 1582 319 232 0 52 chrX 130711309 130711397 -35938899 - B4A SINE B4 -79 86 2 4 1582 487 276 71 35 chrX 130711508 130711677 -35938619 - B3 SINE B2 0 216 42 4 1582 642 270 56 51 chrX 130712111 130712326 -35937970 + B3 SINE B2 1 216 0 4 1582 261 0 0 0 chrX 130712795 130712824 -35937472 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1582 604 185 76 0 chrX 130712824 130712943 -35937353 - B1_Mus2 SINE Alu -10 137 10 4 1582 711 257 0 0 chrX 130713141 130713285 -35937011 + B1_Mur2 SINE Alu 1 144 -5 4 1582 623 208 26 59 chrX 130713412 130713548 -35936748 + B1_Mur2 SINE Alu 1 138 -11 4 1582 354 23 0 0 chrX 130713548 130713591 -35936705 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 4 1582 623 208 26 59 chrX 130713591 130713607 -35936689 + B1_Mur2 SINE Alu 139 148 -1 4 1582 3640 37 2 2 chrX 130713655 130714093 -35936203 - L1Md_F2 LINE L1 0 6582 6145 4 1582 1755 179 64 31 chrX 130714097 130714489 -35935807 - MTD LTR MaLR -14 405 1 4 1582 570 29 0 0 chrX 130714506 130714574 -35935722 + (TC)n Simple_repeat Simple_repeat 1 68 0 4 1582 214 310 159 11 chrX 130714574 130714662 -35935634 - PB1D10 SINE Alu -16 101 1 4 1582 1989 25 12 32 chrX 130714691 130714944 -35935352 - L1Md_F3 LINE L1 -1 6583 6336 4 1582 23 33 0 0 chrX 130715051 130715081 -35935215 + AT_rich Low_complexity Low_complexity 1 30 0 4 1582 3559 58 7 2 chrX 130715665 130716112 -35934184 + L1_Mus2 LINE L1 6117 6565 -1 4 1582 418 336 120 21 chrX 130716397 130716631 -35933665 + MTEa LTR MaLR 62 318 -61 4 1582 2216 226 4 21 chrX 130716786 130717264 -35933032 - Lx6 LINE L1 -26 7434 6965 4 1582 395 158 60 12 chrX 130717321 130717404 -35932892 - RSINE1 SINE B4 -75 90 4 4 1582 300 204 73 16 chrX 130717502 130717645 -35932651 + L1M2 LINE L1 5233 5400 -897 4 1582 840 157 7 41 chrX 130717647 130717793 -35932503 - B1_Mur1 SINE Alu -7 142 2 4 1582 1583 229 62 102 chrX 130717960 130718489 -35931807 - RMER19C LTR ERVK 0 611 104 4 1582 547 264 245 42 chrX 130719391 130719502 -35930794 - ORR1E LTR MaLR -10 349 209 4 1582 684 56 0 0 chrX 130719502 130719591 -35930705 + (CA)n Simple_repeat Simple_repeat 2 90 0 4 1582 547 253 78 135 chrX 130719591 130719763 -35930533 - ORR1E LTR MaLR -151 208 6 4 1582 910 299 31 16 chrX 130719834 130720157 -35930139 - Lx8 LINE L1 -313 7160 6833 4 1582 1169 295 46 6 chrX 130720186 130720537 -35929759 - Lx8 LINE L1 -706 6767 6403 4 1582 210 37 0 0 chrX 130720541 130720568 -35929728 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1582 590 281 58 7 chrX 130720590 130720744 -35929552 - B3 SINE B2 -54 162 1 4 1582 577 291 42 0 chrX 130720744 130720909 -35929387 - Lx8 LINE L1 -1075 6398 6227 4 1582 2038 156 48 3 chrX 130721040 130721419 -35928877 - MTC LTR MaLR -25 396 1 4 1582 391 347 72 5 chrX 130721532 130721726 -35928570 + MIR SINE MIR 25 231 -31 4 1582 1296 14 0 0 chrX 130721749 130721896 -35928400 - B1_Mm SINE Alu 0 147 1 4 1582 254 245 0 0 chrX 130722364 130722417 -35927879 + MIR SINE MIR 25 77 -185 4 1582 1069 284 58 5 chrX 130723144 130723555 -35926741 + L1MB7 LINE L1 5396 5828 -356 4 1582 518 206 116 23 chrX 130723560 130723689 -35926607 + B1_Mur1 SINE Alu 9 149 0 4 1582 306 0 0 0 chrX 130723689 130723723 -35926573 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1582 903 186 27 68 chrX 130727101 130727320 -35922976 - B3 SINE B2 -2 214 5 4 1582 501 176 191 5 chrX 130728030 130728151 -35922145 - Lx9 LINE L1 -2 7642 7495 4 1582 249 33 0 0 chrX 130728151 130728181 -35922115 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1582 501 176 191 5 chrX 130728181 130728253 -35922043 - Lx9 LINE L1 -150 7494 7414 4 1582 418 116 0 40 chrX 130728523 130728622 -35921674 + (TCTCTG)n Simple_repeat Simple_repeat 2 96 0 4 1582 2922 179 21 9 chrX 130728634 130729320 -35920976 - Lx5 LINE L1 -11 7039 6268 4 1582 1823 112 156 10 chrX 130729312 130729620 -35920676 - L1_Mus3 LINE L1 -188 5689 5337 4 1582 2785 13 19 0 chrX 130729621 130729937 -35920359 - RLTRETN_Mm LTR ERVK 0 322 1 4 1582 3907 32 43 29 chrX 130729937 130730447 -35919849 - MMETn-int LTR ERVK 0 4844 4328 4 1582 5688 247 81 103 chrX 130730447 130730497 -35919799 - L1_Mus3 LINE L1 -542 5338 5289 4 1582 1508 60 16 0 chrX 130730497 130730680 -35919616 - B2_Mm2 SINE B2 -8 187 2 4 1582 7592 199 61 72 chrX 130730680 130733988 -35916308 - L1_Mus3 LINE L1 -11 6627 2106 4 1582 294 50 0 0 chrX 130733988 130734028 -35916268 + (TGG)n Simple_repeat Simple_repeat 2 41 0 4 1582 5688 247 81 103 chrX 130734028 130734591 -35915705 - L1_Mus3 LINE L1 -3775 2105 1504 4 1582 1268 237 110 16 chrX 130734586 130734951 -35915345 - L1_Mus3 LINE L1 -5972 1114 716 4 1582 195 259 56 0 chrX 130735428 130735482 -35914814 - MIRm SINE MIR -1 275 219 4 1582 667 215 0 29 chrX 130735894 130736033 -35914263 + B1_Mur2 SINE Alu 2 136 -13 4 1582 423 0 0 0 chrX 130736034 130736081 -35914215 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1582 448 191 71 18 chrX 130737339 130737451 -35912845 - PB1D9 SINE Alu -1 119 2 4 1582 1176 68 0 7 chrX 130738462 130738602 -35911694 + B1_Mus1 SINE Alu 1 140 -8 4 1582 735 44 0 0 chrX 130738602 130738693 -35911603 + (CAGAA)n Simple_repeat Simple_repeat 4 94 0 4 1582 425 189 7 10 chrX 130738949 130739054 -35911242 - ORR1B1 LTR MaLR -4 390 277 4 1582 482 183 43 9 chrX 130739056 130739172 -35911124 - Lx4B LINE L1 -46 7012 6893 4 1582 1532 165 14 97 chrX 130739173 130739523 -35910773 - ORR1B1 LTR MaLR -73 321 1 4 1582 302 169 137 27 chrX 130739778 130739851 -35910445 + ID4 SINE ID 3 83 0 4 1582 639 281 65 0 chrX 130740700 130740899 -35909397 + B3 SINE B2 1 212 -4 4 1582 490 58 57 23 chrX 130740990 130741078 -35909218 + L1Md_F2 LINE L1 6492 6582 0 4 1582 452 310 112 66 chrX 130741206 130741431 -35908865 + B4A SINE B4 1 229 -63 4 1582 198 0 0 0 chrX 130741431 130741453 -35908843 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 4 1582 452 310 112 66 chrX 130741453 130741486 -35908810 + B4A SINE B4 230 271 -21 4 1582 452 93 13 0 chrX 130741487 130741562 -35908734 + (CA)n Simple_repeat Simple_repeat 1 76 0 4 1582 297 0 0 0 chrX 130742602 130742635 -35907661 + (GTTTG)n Simple_repeat Simple_repeat 1 33 0 4 1582 197 222 79 0 chrX 130742821 130742884 -35907412 - MIRb SINE MIR -7 261 194 4 1582 514 326 21 0 chrX 130743086 130743276 -35907020 - MIRb SINE MIR -16 252 59 4 1582 637 253 114 37 chrX 130743293 130743564 -35906732 + B4A SINE B4 1 292 0 4 1582 615 175 0 9 chrX 130743789 130743904 -35906392 - B1_Mur3 SINE Alu -25 124 11 4 1582 261 283 0 0 chrX 130744253 130744313 -35905983 + ID4 SINE ID 23 82 -1 5 1582 1209 35 0 7 chrX 130744334 130744477 -35905819 + B1_Mus2 SINE Alu 1 142 -5 5 1582 710 138 16 0 chrX 130744527 130744650 -35905646 - B1_Mur3 SINE Alu -2 147 23 5 1582 357 219 177 28 chrX 130744724 130744865 -35905431 - MTEb LTR MaLR -217 162 1 5 1582 608 273 20 0 chrX 130745055 130745205 -35905091 + ID_B1 SINE B4 70 222 -2 5 1582 261 0 0 0 chrX 130746149 130746178 -35904118 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 1582 297 0 0 0 chrX 130746178 130746210 -35904086 + (GA)n Simple_repeat Simple_repeat 1 33 0 5 1582 307 206 175 0 chrX 130746292 130746389 -35903907 - PB1D9 SINE Alu 0 120 7 5 1582 2420 168 0 2 chrX 130746428 130746835 -35903461 + MTC LTR MaLR 5 410 -11 5 1582 709 264 92 15 chrX 130746835 130747031 -35903265 - ID_B1 SINE B4 -11 213 3 5 1582 358 173 173 0 chrX 130747536 130747617 -35902679 - PB1D10 SINE Alu -10 107 13 5 1582 517 278 28 36 chrX 130747633 130747883 -35902413 - L1MC4a LINE L1 0 7882 7635 5 1582 992 114 0 22 chrX 130748074 130748254 -35902042 + (GGA)n Simple_repeat Simple_repeat 3 178 0 5 1582 354 156 0 0 chrX 130748255 130748319 -35901977 + GA-rich Low_complexity Low_complexity 3 66 0 5 1582 3457 63 31 20 chrX 130748640 130749095 -35901201 - L1Md_F2 LINE L1 -12 6570 6111 5 1582 328 244 24 12 chrX 130749109 130749192 -35901104 + Tigger5 DNA MER2_type 21 104 -2302 5 1582 401 279 57 64 chrX 130749364 130749521 -35900775 - MIRb SINE MIR -111 157 2 5 1582 567 284 0 0 chrX 130749702 130749843 -35900453 + B1F2 SINE Alu 3 143 -6 5 1582 948 249 0 29 chrX 130749974 130750181 -35900115 - B3 SINE B2 -8 208 8 5 1582 836 135 0 0 chrX 130750715 130750848 -35899448 - B1_Mus1 SINE Alu -5 143 11 5 1582 237 192 0 19 chrX 130750973 130751026 -35899270 + MER5B DNA MER1_type 11 62 -116 5 1582 1113 88 6 0 chrX 130751029 130751188 -35899108 + B2_Mm1a SINE B2 1 160 -33 5 1582 180 0 0 0 chrX 130751188 130751208 -35899088 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 5 1582 537 238 110 8 chrX 130752368 130752495 -35897801 + RSINE1 SINE B4 3 142 -23 5 1582 450 261 0 25 chrX 130752620 130752738 -35897558 + PB1D7 SINE Alu 4 118 -2 5 1582 538 269 0 22 chrX 130752834 130752971 -35897325 - RSINE1 SINE B4 -28 137 4 5 1582 914 246 48 27 chrX 130753205 130753498 -35896798 - MTD LTR MaLR -107 312 14 5 1582 363 44 0 0 chrX 130753720 130753765 -35896531 + (CACCC)n Simple_repeat Simple_repeat 4 48 0 5 1582 646 246 0 7 chrX 130753887 130754022 -35896274 + RSINE1 SINE B4 2 135 -30 5 1582 412 302 58 11 chrX 130754120 130754294 -35896002 - MER5A DNA MER1_type -1 188 7 5 1582 1851 53 0 0 chrX 130754300 130754528 -35895768 + L1Md_F2 LINE L1 6347 6574 -8 5 1582 260 278 0 100 chrX 130754562 130754662 -35895634 - MER5B DNA MER1_type 0 178 89 5 1582 260 238 16 0 chrX 130754706 130754769 -35895527 + L1MA5 LINE L1 5866 5929 -371 5 1582 424 269 0 0 chrX 130755100 130755193 -35895103 - B1F SINE Alu -56 93 1 5 1582 377 349 74 65 chrX 130755366 130755719 -35894577 - ORR1E LTR MaLR 0 359 4 5 1582 665 286 76 20 chrX 130755791 130756041 -35894255 + MER74A LTR ERVL 209 472 -86 5 1582 273 247 12 83 chrX 130756166 130756250 -35894046 + ID_B1 SINE B4 147 224 0 5 1582 462 286 21 28 chrX 130756260 130756404 -35893892 + ID_B1 SINE B4 11 153 -71 5 1582 1314 202 121 14 chrX 130756404 130756569 -35893727 + ORR1C2 LTR MaLR 2 197 -187 5 1582 279 0 127 0 chrX 130756569 130756640 -35893656 + (CCTG)n Simple_repeat Simple_repeat 4 83 0 5 1582 1314 202 121 14 chrX 130756640 130756820 -35893476 + ORR1C2 LTR MaLR 198 384 0 5 1582 4087 59 6 4 chrX 130756880 130757408 -35892888 - Lx3_Mus LINE L1 -1 7008 6480 5 1582 768 291 5 5 chrX 130757864 130758061 -35892235 - B3A SINE B2 -1 197 1 5 1582 738 246 101 43 chrX 130758158 130758434 -35891862 - B4A SINE B4 0 292 1 5 1582 924 261 0 9 chrX 130758489 130758701 -35891595 + ID_B1 SINE B4 1 211 -13 5 1582 207 0 0 0 chrX 130758701 130758724 -35891572 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 5 1582 238 260 78 0 chrX 130759420 130759497 -35890799 - Tigger5 DNA MER2_type -1 2405 2323 5 1582 627 275 121 17 chrX 130759498 130759738 -35890558 + B4 SINE B4 2 266 -26 5 1582 249 57 0 0 chrX 130759748 130759783 -35890513 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1582 1137 75 7 0 chrX 130759817 130759963 -35890333 - B1_Mus2 SINE Alu 0 147 1 5 1582 689 128 176 0 chrX 130760156 130760281 -35890015 - B1_Mus2 SINE Alu 0 147 1 5 1582 1133 28 6 76 chrX 130760439 130760596 -35889700 - B1_Mm SINE Alu 0 147 2 5 1582 922 248 5 14 chrX 130760623 130760840 -35889456 - B3 SINE B2 0 216 2 5 1582 4429 8 0 0 chrX 130760969 130761451 -35888845 + LTRIS_Mm LTR ERV1 1 482 0 5 1582 270 136 0 0 chrX 130761766 130761810 -35888486 + (CATG)n Simple_repeat Simple_repeat 1 44 0 5 1582 380 290 63 114 chrX 130761832 130761954 -35888342 - B3A SINE B2 -18 180 63 5 1582 1182 36 0 0 chrX 130761954 130762092 -35888204 + B1_Mus2 SINE Alu 2 139 -8 5 1582 246 95 0 0 chrX 130762092 130762134 -35888162 + (CTAA)n Simple_repeat Simple_repeat 3 44 0 5 1582 380 290 63 114 chrX 130762134 130762185 -35888111 - B3A SINE B2 -136 62 16 5 1582 1082 121 0 0 chrX 130762426 130762575 -35887721 + B1_Mur3 SINE Alu 1 149 0 5 1582 274 221 18 133 chrX 130762588 130762701 -35887595 + ID4 SINE ID 11 110 -42 5 1582 447 281 124 56 chrX 130762744 130763304 -35886992 + L1MB7 LINE L1 5553 6150 -34 5 1582 1336 188 151 2 chrX 130763328 130763608 -35886688 + Lx6 LINE L1 6992 7283 -177 5 1582 565 169 31 31 chrX 130763650 130763778 -35886518 - B1_Mur3 SINE Alu 0 149 22 5 1582 22 35 0 0 chrX 130763898 130763927 -35886369 + AT_rich Low_complexity Low_complexity 1 29 0 5 1582 968 131 0 20 chrX 130763969 130764117 -35886179 - B1_Mur2 SINE Alu 0 149 5 5 1582 439 182 13 0 chrX 130764144 130764221 -35886075 - B3A SINE B2 -118 80 3 5 1582 228 261 0 14 chrX 130764224 130764294 -35886002 + L1MB8 LINE L1 6110 6178 0 5 1582 327 299 98 31 chrX 130764307 130764500 -35885796 - L1MC LINE L1 -2050 5832 5627 5 1582 335 153 40 27 chrX 130764513 130764587 -35885709 + B3 SINE B2 134 208 -8 5 1582 727 246 103 9 chrX 130764793 130765006 -35885290 + Lx8 LINE L1 7232 7464 -9 5 1582 232 196 0 21 chrX 130765012 130765059 -35885237 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 5 1582 703 183 30 0 chrX 130765130 130765261 -35885035 - B1_Mur2 SINE Alu -14 135 1 5 1582 481 328 41 26 chrX 130765499 130765765 -35884531 - L1MB7 LINE L1 -11 6173 5904 5 1582 261 0 0 0 chrX 130765777 130765806 -35884490 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1582 655 240 35 40 chrX 130765843 130766043 -35884253 - B4A SINE B4 -18 274 76 5 1582 646 260 34 45 chrX 130766060 130766326 -35883970 - L1MB7 LINE L1 -882 5264 5002 5 1582 696 229 0 27 chrX 130766343 130766491 -35883805 - ID_B1 SINE B4 0 224 81 5 1582 1238 48 0 0 chrX 130766568 130766715 -35883581 + B1_Mm SINE Alu 1 147 0 5 1582 895 239 28 14 chrX 130766844 130766957 -35883339 + B3 SINE B2 2 112 -104 5 1582 4214 27 2 0 chrX 130766957 130767435 -35882861 + LTRIS_Mm LTR ERV1 4 482 0 5 1582 895 239 28 14 chrX 130767435 130767533 -35882763 + B3 SINE B2 113 216 0 5 1582 632 268 58 49 chrX 130767542 130767766 -35882530 + L1M2 LINE L1 5561 5786 -505 5 1582 436 274 60 54 chrX 130767806 130767961 -35882335 + B4A SINE B4 76 231 -61 5 1582 589 246 40 0 chrX 130767961 130768087 -35882209 + RSINE1 SINE B4 4 134 -31 5 1582 261 301 14 14 chrX 130768121 130768195 -35882101 + B4A SINE B4 219 292 0 5 1582 242 281 72 10 chrX 130768198 130768295 -35882001 + L1_Rod LINE L1 5715 5817 -30 5 1582 406 271 40 24 chrX 130768444 130768569 -35881727 + RSINE1 SINE B4 3 129 -36 5 1582 414 246 28 91 chrX 130769010 130769153 -35881143 - B1F1 SINE Alu -12 137 4 5 1582 227 211 27 18 chrX 130769276 130769387 -35880909 + (TCTA)n Simple_repeat Simple_repeat 3 114 0 5 1582 737 188 21 0 chrX 130769387 130769531 -35880765 - B1_Mus1 SINE Alu -1 147 1 5 1582 767 196 0 7 chrX 130769820 130769964 -35880332 - B1_Mur1 SINE Alu -6 143 1 5 1582 242 265 131 10 chrX 130769982 130770081 -35880215 - PB1D9 SINE Alu -9 111 1 5 1582 1675 214 69 39 chrX 130770116 130770548 -35879748 - Lx8 LINE L1 -5 7468 7024 5 1582 234 211 0 34 chrX 130770652 130770711 -35879585 + L1MA5 LINE L1 5426 5482 -818 5 1582 436 234 282 0 chrX 130770715 130770839 -35879457 + RSINE1 SINE B4 2 160 -5 5 1582 462 215 27 27 chrX 130770891 130771001 -35879295 + PB1D10 SINE Alu 5 114 -3 5 1582 377 289 7 34 chrX 130771007 130771154 -35879142 + RSINE1 SINE B4 4 146 -19 5 1582 21 36 0 0 chrX 130771182 130771210 -35879086 + AT_rich Low_complexity Low_complexity 1 28 0 5 1582 880 277 87 20 chrX 130771230 130771669 -35878627 + L1MA5 LINE L1 5476 5943 -357 5 1582 315 49 0 0 chrX 130771754 130771795 -35878501 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1582 431 311 93 13 chrX 130771806 130771956 -35878340 - B4 SINE B4 -20 272 111 5 1582 309 257 47 19 chrX 130772005 130772112 -35878184 + MER96B DNA hAT 297 406 -11 5 1582 640 293 53 14 chrX 130772150 130772358 -35877938 + B3 SINE B2 1 216 0 5 1582 717 175 80 7 chrX 130772389 130772527 -35877769 + B1_Mur2 SINE Alu 1 148 -1 5 1582 266 340 21 11 chrX 130773415 130773435 -35876861 + ID_B1 SINE B4 63 156 -66 5 1582 283 274 82 0 chrX 130773435 130773508 -35876788 + PB1D10 SINE Alu 1 79 -38 6 1582 1278 97 11 0 chrX 130773558 130773734 -35876562 + B2_Mm1t SINE B2 2 179 -14 6 1582 381 98 293 89 chrX 130773800 130773923 -35876373 + B2_Mm2 SINE B2 47 194 -1 6 1582 638 221 0 97 chrX 130774044 130774209 -35876087 - B1_Mur1 SINE Alu 0 149 1 6 1582 395 247 0 12 chrX 130774487 130774569 -35875727 - ID4_ SINE ID -2 81 1 6 1582 596 200 25 8 chrX 130776092 130776213 -35874083 + RSINE1 SINE B4 5 127 -38 6 1582 276 289 100 65 chrX 130776353 130776523 -35873773 + MIRc SINE MIR 15 190 -78 6 1582 939 258 3 111 chrX 130776606 130776784 -35873512 + MTD LTR MaLR 34 210 -209 6 1582 992 238 25 0 chrX 130776784 130776986 -35873310 + B3 SINE B2 3 209 -7 6 1582 939 258 3 111 chrX 130776986 130777104 -35873192 + MTD LTR MaLR 211 298 -121 6 1582 485 253 22 112 chrX 130777764 130777862 -35872434 + MLT1B LTR MaLR 14 103 -287 6 1582 226 326 53 0 chrX 130777862 130777957 -35872339 + PB1D10 SINE Alu 1 100 -17 6 1582 485 253 22 112 chrX 130777957 130778036 -35872260 + MLT1B LTR MaLR 104 175 -215 6 1582 677 249 128 30 chrX 130778040 130778243 -35872053 + ID_B1 SINE B4 2 224 0 6 1582 459 210 0 4 chrX 130778243 130778489 -35871807 + GA-rich Low_complexity Low_complexity 1 245 0 6 1582 313 309 144 12 chrX 130778520 130778687 -35871609 + MLT1B LTR MaLR 189 377 -13 6 1582 268 245 12 41 chrX 130779245 130779339 -35870957 + ID4 SINE ID 8 97 -55 6 1582 2586 116 32 62 chrX 130779557 130780024 -35870272 + RLTR11B LTR ERVK 1 453 0 6 1582 676 283 24 10 chrX 130780462 130780669 -35869627 + B3 SINE B2 1 210 -6 6 1582 607 254 0 0 chrX 130780724 130780850 -35869446 + ID_B1 SINE B4 99 224 0 6 1582 404 290 13 40 chrX 130781628 130781644 -35868652 + ID_B1 SINE B4 78 224 0 6 1582 722 200 7 0 chrX 130781644 130781779 -35868517 + B1_Mus1 SINE Alu 13 148 0 6 1582 691 286 162 61 chrX 130781796 130782541 -35867755 + L1MA4 LINE L1 5086 5933 -358 6 1582 221 110 65 11 chrX 130782558 130782650 -35867646 + (TA)n Simple_repeat Simple_repeat 1 97 0 6 1582 386 66 33 0 chrX 130782817 130782878 -35867418 + (CAGAGA)n Simple_repeat Simple_repeat 3 65 0 6 1582 384 22 0 0 chrX 130783230 130783275 -35867021 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1582 244 225 97 14 chrX 130783348 130783420 -35866876 + L2 LINE L2 2855 2932 -487 6 1582 186 143 0 0 chrX 130783548 130783583 -35866713 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 6 1582 288 260 55 0 chrX 130783589 130783662 -35866634 + PB1D10 SINE Alu 33 109 -8 6 1582 1558 91 170 7 chrX 130783751 130784027 -35866269 + ORR1A4 LTR MaLR 1 321 -8 6 1582 303 298 105 0 chrX 130784037 130784218 -35866078 + HAL1 LINE L1 1567 1766 -741 6 1582 414 252 37 9 chrX 130784234 130784342 -35865954 + PB1D9 SINE Alu 5 115 -5 6 1582 610 321 9 49 chrX 130784396 130784622 -35865674 + B4A SINE B4 2 218 -74 6 1582 5462 14 2 0 chrX 130784622 130785242 -35865054 + L1Md_T LINE L1 4966 5586 -297 6 1582 8276 39 0 38 chrX 130785242 130786277 -35864019 + L1Md_T LINE L1 5587 6582 0 6 1582 1725 224 16 8 chrX 130786462 130786845 -35863451 + RMER15 LTR ERVL 187 572 -3 6 1582 567 62 0 0 chrX 130786845 130786912 -35863384 + RMER17D2 LTR ERVK 191 257 -552 6 1582 570 91 0 0 chrX 130786912 130786989 -35863307 + Lx7 LINE L1 4817 4893 -987 6 1582 5004 176 36 13 chrX 130786991 130788432 -35861864 + Lx7 LINE L1 5014 6490 -1206 6 1582 2047 99 39 54 chrX 130788433 130788491 -35861805 - ORR1A2 LTR MaLR 0 327 287 6 1582 1201 55 0 0 chrX 130788491 130788637 -35861659 - B1_Mus2 SINE Alu 0 147 2 6 1582 2047 99 39 54 chrX 130788637 130788910 -35861386 - ORR1A2 LTR MaLR -41 286 1 6 1582 776 159 6 43 chrX 130788930 130789094 -35861202 - ORR1A2 LTR MaLR -169 158 1 6 1582 3573 193 17 48 chrX 130789096 130789226 -35861070 + Lx7 LINE L1 6490 6616 -1080 6 1582 705 137 78 31 chrX 130789226 130789354 -35860942 + B1_Mus1 SINE Alu 2 135 -13 6 1582 216 0 0 0 chrX 130789354 130789378 -35860918 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 6 1582 3573 193 17 48 chrX 130789378 130789970 -35860326 + Lx7 LINE L1 6617 7189 -507 6 1582 798 117 31 0 chrX 130789970 130790098 -35860198 + B1_Mur4 SINE Alu 19 150 0 6 1582 1078 213 29 104 chrX 130790109 130790365 -35859931 + Lx7 LINE L1 7185 7418 -278 6 1582 612 0 0 0 chrX 130790365 130790433 -35859863 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 6 1582 1078 213 29 104 chrX 130790433 130790559 -35859737 + Lx7 LINE L1 7419 7538 -158 6 1582 25 31 0 0 chrX 130790973 130791005 -35859291 + AT_rich Low_complexity Low_complexity 1 32 0 6 1582 661 257 64 0 chrX 130791062 130791233 -35859063 + B3A SINE B2 2 183 -15 6 1582 326 204 0 34 chrX 130791498 130791615 -35858681 + GA-rich Low_complexity Low_complexity 3 115 0 6 1582 367 312 46 95 chrX 130791990 130792315 -35857981 + B4 SINE B4 1 279 -13 6 1582 237 119 0 0 chrX 130792334 130792376 -35857920 + (GA)n Simple_repeat Simple_repeat 2 43 0 6 1582 578 260 85 81 chrX 130792439 130792476 -35857820 + B4A SINE B4 45 82 -210 6 1582 243 0 0 0 chrX 130792476 130792503 -35857793 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1582 578 260 85 81 chrX 130792503 130792712 -35857584 + B4A SINE B4 83 291 -1 6 1582 445 274 15 0 chrX 130792781 130792916 -35857380 + B1F SINE Alu 13 149 0 6 1582 573 287 7 7 chrX 130792919 130793070 -35857226 + RSINE1 SINE B4 6 156 -9 6 1582 831 226 38 95 chrX 130793113 130793377 -35856919 + MER2 DNA MER2_type 88 336 -9 6 1582 380 37 19 0 chrX 130793418 130793472 -35856824 + (TAAA)n Simple_repeat Simple_repeat 4 58 0 6 1582 921 147 100 0 chrX 130793475 130793645 -35856651 + B2_Mm2 SINE B2 1 187 -8 6 1582 586 218 117 45 chrX 130794336 130794490 -35855806 + RSINE1 SINE B4 1 165 0 6 1582 217 254 36 0 chrX 130794867 130794922 -35855374 + RSINE1 SINE B4 2 58 -107 6 1582 1067 208 9 0 chrX 130794963 130795175 -35855121 + B3 SINE B2 3 216 0 6 1582 341 305 0 0 chrX 130795647 130795729 -35854567 - ID4 SINE ID 0 83 2 6 1582 569 114 9 19 chrX 130796366 130796473 -35853823 - Lx2 LINE L1 -2 6995 6890 6 1582 207 0 0 0 chrX 130797274 130797297 -35852999 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1582 303 344 122 6 chrX 130798048 130798212 -35852084 + MIR SINE MIR 71 253 -9 6 1582 325 216 68 58 chrX 130798635 130798738 -35851558 + MER3 DNA MER1_type 1 104 -105 6 1582 927 171 113 10 chrX 130799109 130799304 -35850992 - B3 SINE B2 -1 215 1 6 1582 343 213 245 0 chrX 130799308 130799402 -35850894 - B1_Mus2 SINE Alu -23 124 8 6 1582 228 316 0 13 chrX 130799430 130799507 -35850789 + (TG)n Simple_repeat Simple_repeat 1 76 0 6 1582 459 52 0 0 chrX 130799507 130799565 -35850731 + (TA)n Simple_repeat Simple_repeat 1 58 0 6 1582 914 234 28 9 chrX 130799654 130799865 -35850431 + B3 SINE B2 1 215 -1 6 1582 855 309 23 0 chrX 130800012 130800268 -35850028 - Tigger9b DNA MER2_type -361 263 2 6 1582 239 170 0 21 chrX 130800268 130800310 -35849986 + MER3 DNA MER1_type 155 195 -14 6 1582 544 310 83 5 chrX 130800470 130800674 -35849622 + ID_B1 SINE B4 3 222 -2 6 1582 824 150 41 35 chrX 130801273 130801418 -35848878 - B1_Mur1 SINE Alu 0 149 4 6 1582 26 30 0 0 chrX 130801446 130801479 -35848817 + AT_rich Low_complexity Low_complexity 1 33 0 6 1582 406 269 126 0 chrX 130801485 130801604 -35848692 - ID_B1 SINE B4 -7 217 84 6 1582 412 304 21 28 chrX 130802284 130802426 -35847870 + B1F SINE Alu 1 141 -8 6 1582 221 0 0 33 chrX 130802433 130802463 -35847833 + (TAA)n Simple_repeat Simple_repeat 2 30 0 6 1582 774 207 239 27 chrX 130802465 130802649 -35847647 + ID_B1 SINE B4 2 224 0 6 1582 583 254 67 0 chrX 130802662 130802796 -35847500 + B1_Mur1 SINE Alu 5 147 -2 6 1582 298 299 0 0 chrX 130802796 130802873 -35847423 + ID4_ SINE ID 3 79 -4 6 1582 236 240 208 32 chrX 130803373 130803498 -35846798 + B1F2 SINE Alu 2 148 -1 6 1582 189 107 0 0 chrX 130803517 130803545 -35846751 + (GGGA)n Simple_repeat Simple_repeat 1 28 0 6 1582 249 325 79 63 chrX 130803757 130803945 -35846351 + MIRb SINE MIR 20 207 -61 6 1582 260 270 13 13 chrX 130803970 130804045 -35846251 + ID4 SINE ID 8 82 -1 6 1582 963 206 40 36 chrX 130804374 130804621 -35845675 + MTD LTR MaLR 1 248 -171 6 1582 7194 133 47 17 chrX 130804621 130806313 -35843983 + Lx3C LINE L1 5215 6976 0 6 1582 28 0 0 0 chrX 130806313 130806341 -35843955 + AT_rich Low_complexity Low_complexity 1 28 0 6 1582 527 255 21 7 chrX 130806486 130806628 -35843668 - B1F SINE Alu -5 144 1 6 1582 950 183 99 0 chrX 130806891 130807082 -35843214 + B3 SINE B2 1 210 -6 6 1582 862 284 214 13 chrX 130807196 130807279 -35843017 + Lx5 LINE L1 5039 5130 -750 6 1582 342 0 0 0 chrX 130807279 130807317 -35842979 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1582 862 284 214 13 chrX 130807317 130807416 -35842880 + Lx5 LINE L1 5131 5256 -624 6 1582 240 86 0 0 chrX 130807416 130807451 -35842845 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1582 675 118 235 0 chrX 130807454 130807573 -35842723 + B1_Mus2 SINE Alu 1 147 0 6 1582 862 284 214 13 chrX 130807573 130807626 -35842670 + Lx5 LINE L1 5257 5358 -522 6 1582 1041 115 0 20 chrX 130807626 130807777 -35842519 + B1_Mur4 SINE Alu 3 150 0 6 1582 931 279 100 8 chrX 130807777 130808162 -35842134 + Lx5 LINE L1 5359 5822 -478 6 1582 384 236 26 9 chrX 130808167 130808290 -35842006 + Lx5 LINE L1 6262 6410 -648 6 1582 903 176 21 139 chrX 130808413 130808650 -35841646 + B3 SINE B2 7 215 -1 6 1582 731 165 56 28 chrX 130808679 130808822 -35841474 + B1_Mur3 SINE Alu 3 149 0 6 1582 1228 82 35 0 chrX 130808832 130809002 -35841294 + B2_Mm2 SINE B2 1 176 -19 6 1582 324 356 34 0 chrX 130809025 130809174 -35841122 + MIRb SINE MIR 50 203 -65 6 1582 472 217 191 52 chrX 130809563 130809757 -35840539 + ID_B1 SINE B4 4 224 0 6 1583 279 0 0 0 chrX 130810085 130810116 -35840180 + (GA)n Simple_repeat Simple_repeat 1 31 0 6 1583 1464 122 9 13 chrX 130810598 130810823 -35839473 - URR1A DNA MER1_type -2 224 1 6 1583 759 259 50 50 chrX 130810858 130811159 -35839137 + MTE2a LTR MaLR 76 376 -3 6 1583 222 160 39 20 chrX 130811297 130811348 -35838948 + C-rich Low_complexity Low_complexity 3 54 0 6 1583 465 268 15 54 chrX 130811784 130811914 -35838382 - RSINE1 SINE B4 -16 149 25 6 1583 986 242 101 56 chrX 130812093 130812768 -35837528 - Lx6 LINE L1 0 7460 6256 7 1583 213 277 0 86 chrX 130812768 130812838 -35837458 - B1_Mus1 SINE Alu -32 85 22 7 1583 737 221 115 25 chrX 130813184 130813384 -35836912 + ID_B1 SINE B4 2 219 -5 7 1583 26 0 0 0 chrX 130813526 130813552 -35836744 + AT_rich Low_complexity Low_complexity 1 26 0 7 1583 990 224 40 0 chrX 130813781 130813982 -35836314 + B3 SINE B2 1 209 -7 7 1583 570 229 0 0 chrX 130814013 130814118 -35836178 + B3 SINE B2 1 105 -111 7 1583 207 0 0 0 chrX 130814164 130814187 -35836109 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 7 1583 849 186 28 0 chrX 130814193 130814338 -35835958 + B1_Mur2 SINE Alu 1 149 0 7 1583 245 282 33 25 chrX 130814421 130814541 -35835755 + (CATATA)n Simple_repeat Simple_repeat 2 122 0 7 1583 193 283 16 48 chrX 130814857 130814920 -35835376 + L2b LINE L2 3305 3365 -10 7 1583 696 235 63 2 chrX 130815432 130815636 -35834660 + B3A SINE B2 1 214 -2 7 1583 377 198 11 0 chrX 130815638 130815729 -35834567 + (TA)n Simple_repeat Simple_repeat 1 92 0 7 1583 1197 48 0 7 chrX 130816455 130816603 -35833693 + B1_Mm SINE Alu 1 147 0 7 1583 360 328 78 47 chrX 130816699 130816891 -35833405 + B4A SINE B4 8 205 -87 7 1583 341 246 136 34 chrX 130817070 130817084 -35833212 + B1F SINE Alu 1 130 -19 7 1583 433 210 39 39 chrX 130817084 130817188 -35833108 + ID_B1 SINE B4 102 205 -19 7 1583 609 295 0 6 chrX 130817219 130817376 -35832920 + RSINE1 SINE B4 6 161 -4 7 1583 875 204 47 24 chrX 130817410 130817621 -35832675 + B3 SINE B2 1 216 0 7 1583 537 292 86 48 chrX 130817638 130817825 -35832471 + B3A SINE B2 1 194 -4 7 1583 1327 183 33 184 chrX 130817919 130818369 -35831927 + ORR1C2 LTR MaLR 1 382 -2 7 1583 1618 209 22 35 chrX 130818380 130818748 -35831548 - ORR1D2 LTR MaLR -4 366 4 7 1583 296 193 0 0 chrX 130818757 130818814 -35831482 + ORR1D1 LTR MaLR 314 370 -4 7 1583 281 26 0 26 chrX 130819173 130819212 -35831084 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 7 1583 2586 127 89 12 chrX 130819213 130819642 -35830654 - Lx4A LINE L1 -2 7056 6595 7 1583 22 0 0 0 chrX 130819991 130820013 -35830283 + AT_rich Low_complexity Low_complexity 1 22 0 7 1583 1046 36 14 0 chrX 130820965 130821103 -35829193 + B1_Mus1 SINE Alu 6 145 -3 7 1583 411 21 0 0 chrX 130821103 130821151 -35829145 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 7 1583 418 352 0 0 chrX 130821158 130821280 -35829016 - ID_B1 SINE B4 -17 207 86 7 1583 499 269 59 7 chrX 130821306 130821441 -35828855 - B1_Mur1 SINE Alu -7 142 1 7 1583 317 318 134 6 chrX 130821559 130821730 -35828566 - MIR SINE MIR -5 257 65 7 1583 450 0 0 0 chrX 130821949 130821999 -35828297 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 1583 621 286 22 123 chrX 130822016 130822106 -35828190 + B4 SINE B4 21 220 -68 7 1583 753 188 45 0 chrX 130822106 130822239 -35828057 + B1_Mur1 SINE Alu 5 143 -6 7 1583 635 276 123 11 chrX 130822233 130822344 -35827952 + B4 SINE B4 83 207 -85 7 1583 378 0 0 0 chrX 130822344 130822386 -35827910 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 1583 635 276 123 11 chrX 130822386 130822461 -35827835 + B4 SINE B4 208 290 -2 7 1583 308 275 0 12 chrX 130822550 130822631 -35827665 - MER5A DNA MER1_type -109 80 1 7 1583 237 33 0 0 chrX 130823326 130823356 -35826940 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 1583 257 167 0 18 chrX 130823377 130823432 -35826864 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 1583 223 324 29 0 chrX 130823491 130823559 -35826737 + PB1D10 SINE Alu 11 80 -37 7 1583 212 0 36 0 chrX 130823579 130823607 -35826689 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 7 1583 495 346 67 0 chrX 130823715 130823894 -35826402 + B3 SINE B2 2 192 -24 7 1583 340 203 0 42 chrX 130823948 130824020 -35826276 - ID4 SINE ID -2 81 13 7 1583 413 307 113 69 chrX 130824252 130824483 -35825813 + Zaphod DNA Tip100 98 338 -3693 7 1583 1862 174 18 6 chrX 130824483 130824813 -35825483 + Lx5 LINE L1 6694 7027 -23 7 1583 472 269 107 6 chrX 130824818 130824986 -35825310 + Zaphod DNA Tip100 325 509 -3522 7 1583 350 345 0 0 chrX 130825311 130825430 -35824866 + PB1 SINE Alu 1 119 -8 7 1583 496 289 8 0 chrX 130825700 130825828 -35824468 - ORR1E LTR MaLR -228 131 3 7 1583 264 306 0 45 chrX 130825856 130825945 -35824351 + ID SINE ID 1 85 -139 7 1583 492 186 0 0 chrX 130826536 130826622 -35823674 + MTEb LTR MaLR 1 86 -293 7 1583 246 245 19 0 chrX 130826644 130826697 -35823599 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1583 496 294 18 146 chrX 130826702 130827037 -35823259 - B4A SINE B4 0 292 1 7 1583 317 233 407 0 chrX 130827037 130827231 -35823065 + MTEb LTR MaLR 87 379 0 7 1583 607 156 8 15 chrX 130827324 130827387 -35822909 + polypyrimidine Low_complexity Low_complexity 67 129 0 7 1583 1290 69 0 0 chrX 130827387 130827750 -35822546 + (TCC)n Simple_repeat Simple_repeat 1 363 0 7 1583 607 156 8 15 chrX 130827750 130827812 -35822484 + polypyrimidine Low_complexity Low_complexity 5 66 0 7 1583 430 260 69 30 chrX 130827829 130827960 -35822336 - B1F SINE Alu -1 148 13 7 1583 1308 282 57 8 chrX 130828051 130828437 -35821859 + MTD LTR MaLR 1 405 -14 7 1583 231 315 101 7 chrX 130828820 130828963 -35821333 + MIR SINE MIR 105 261 -1 7 1583 225 194 20 16 chrX 130828992 130829060 -35821236 - L2b LINE L2 -199 3176 3113 7 1583 198 0 0 0 chrX 130829074 130829096 -35821200 + (GGAGAA)n Simple_repeat Simple_repeat 5 26 0 7 1583 485 277 51 0 chrX 130829456 130829593 -35820703 - B1F SINE Alu -5 144 1 7 1583 396 0 0 0 chrX 130832145 130832189 -35818107 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 1583 244 341 35 34 chrX 130832934 130833080 -35817216 - MIR3 SINE MIR -71 191 47 7 1583 720 200 54 0 chrX 130833286 130833416 -35816880 + B1_Mur2 SINE Alu 2 138 -11 7 1583 481 30 30 0 chrX 130833416 130833483 -35816813 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 7 1583 387 336 39 0 chrX 130833657 130833785 -35816511 + MIRb SINE MIR 116 248 -20 7 1583 210 223 70 5 chrX 130834567 130834652 -35815644 - MIR SINE MIR -98 170 80 7 1583 262 246 28 28 chrX 130835228 130835299 -35814997 - L1ME3A LINE L1 -168 6005 5935 7 1583 500 326 130 49 chrX 130835338 130835706 -35814590 + Charlie13b DNA Charlie 84 481 -31 7 1583 261 0 0 0 chrX 130835711 130835740 -35814556 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 1583 540 203 0 3 chrX 130836573 130836673 -35813623 - B1_Mur4 SINE Alu -52 97 1 7 1583 402 250 71 0 chrX 130836894 130837006 -35813290 + ID_B1 SINE B4 86 205 -19 7 1583 217 154 26 0 chrX 130837007 130837046 -35813250 + GA-rich Low_complexity Low_complexity 3 42 0 7 1583 303 355 49 14 chrX 130837048 130837191 -35813105 + HAL1-3A_ME LINE L1 2294 2441 -417 7 1583 297 262 39 0 chrX 130837217 130837320 -35812976 + L1MA4 LINE L1 5833 5939 -361 7 1583 324 70 0 0 chrX 130837320 130837363 -35812933 + (TCC)n Simple_repeat Simple_repeat 3 45 0 7 1583 511 253 147 11 chrX 130837369 130837553 -35812743 - ID_B1 SINE B4 -14 210 2 7 1583 378 0 0 0 chrX 130837582 130837624 -35812672 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1583 214 376 97 8 chrX 130838083 130838217 -35812079 + L2a LINE L2 3281 3426 0 7 1583 782 231 45 15 chrX 130838235 130838437 -35811859 - ID_B1 SINE B4 -6 218 11 7 1583 550 252 83 13 chrX 130838737 130838894 -35811402 - MLT1A0 LTR MaLR 0 365 198 7 1583 195 42 0 0 chrX 130839443 130839467 -35810829 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 1583 345 240 40 13 chrX 130840608 130840684 -35809612 - PB1D7 SINE Alu -2 118 41 7 1583 1619 16 0 25 chrX 130840702 130840898 -35809398 + B2_Mm1a SINE B2 2 192 -1 7 1583 500 186 113 0 chrX 130840910 130841007 -35809289 - PB1D9 SINE Alu -12 108 1 7 1583 297 0 0 0 chrX 130841015 130841048 -35809248 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 7 1583 682 95 267 0 chrX 130841686 130841802 -35808494 + B1_Mus1 SINE Alu 2 148 0 7 1583 354 284 154 27 chrX 130843454 130843722 -35806574 + L2a LINE L2 2847 3139 -287 7 1583 601 262 249 35 chrX 130843752 130843827 -35806469 - ORR1D1 LTR MaLR -45 314 246 7 1583 324 0 0 0 chrX 130843827 130843863 -35806433 + (CAGG)n Simple_repeat Simple_repeat 3 38 0 7 1583 687 184 100 19 chrX 130843863 130844044 -35806252 - ORR1D1 LTR MaLR -114 245 1 7 1583 622 245 121 15 chrX 130844968 130845167 -35805129 - ID_B1 SINE B4 -4 220 1 7 1583 735 188 51 0 chrX 130845346 130845484 -35804812 - B1_Mur1 SINE Alu 0 149 5 7 1583 32 26 0 0 chrX 130845572 130845611 -35804685 + AT_rich Low_complexity Low_complexity 1 39 0 7 1583 361 309 32 8 chrX 130845639 130845763 -35804533 - MER5B DNA MER1_type -15 163 37 7 1583 505 336 14 7 chrX 130845796 130845943 -35804353 + B4A SINE B4 77 224 -68 7 1583 288 0 0 0 chrX 130845943 130845975 -35804321 + (A)n Simple_repeat Simple_repeat 1 32 0 7 1583 1194 48 0 14 chrX 130845979 130846127 -35804169 + B1_Mus1 SINE Alu 2 147 -1 7 1583 401 181 48 65 chrX 130846794 130846918 -35803378 - Lx7 LINE L1 -6 7690 7569 7 1583 1135 65 0 0 chrX 130846926 130847065 -35803231 + B1_Mus2 SINE Alu 1 139 -8 7 1583 315 49 0 0 chrX 130847078 130847119 -35803177 + (GAAA)n Simple_repeat Simple_repeat 3 43 0 7 1583 434 303 9 9 chrX 130847223 130847333 -35802963 - B1F2 SINE Alu -39 110 1 7 1583 747 239 69 5 chrX 130847345 130847534 -35802762 - B3 SINE B2 0 216 16 7 1583 352 285 72 65 chrX 130848103 130848242 -35802054 + RSINE1 SINE B4 4 143 -22 8 1583 261 0 0 0 chrX 130848249 130848278 -35802018 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 1583 193 289 178 34 chrX 130848301 130848419 -35801877 - MIR3 SINE MIR -73 135 1 8 1583 347 291 28 37 chrX 130848957 130849064 -35801232 + PB1D10 SINE Alu 7 112 -5 8 1583 192 40 0 0 chrX 130849102 130849127 -35801169 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 8 1583 447 248 150 16 chrX 130849127 130849244 -35801052 - B1_Mur1 SINE Alu -14 135 1 8 1583 820 172 221 6 chrX 130849442 130849623 -35800673 - URR1A DNA MER1_type -2 224 5 8 1583 538 283 48 11 chrX 130850088 130850274 -35800022 - B3A SINE B2 -5 193 1 8 1583 403 151 398 0 chrX 130850314 130850407 -35799889 + B3 SINE B2 1 130 -86 8 1583 692 183 15 15 chrX 130850409 130850542 -35799754 - B1_Mus2 SINE Alu -13 134 2 8 1583 310 260 18 121 chrX 130850684 130850744 -35799552 - L1MB7 LINE L1 -18 6166 6117 8 1583 357 256 0 0 chrX 130850744 130850822 -35799474 + ID4_ SINE ID 3 80 -3 8 1583 310 260 18 121 chrX 130850822 130850927 -35799369 - L1MB7 LINE L1 -68 6116 6018 8 1583 583 218 0 9 chrX 130850932 130851043 -35799253 - PB1D10 SINE Alu -7 110 1 8 1583 792 183 0 22 chrX 130851060 130851194 -35799102 - B1_Mus1 SINE Alu -7 141 11 8 1583 887 274 13 54 chrX 130851262 130851356 -35798940 + B4A SINE B4 2 88 -204 8 1583 794 254 62 10 chrX 130851356 130851551 -35798745 + B3 SINE B2 1 205 -11 8 1583 887 274 13 54 chrX 130851551 130851695 -35798601 + B4A SINE B4 89 230 -62 8 1583 1189 184 15 0 chrX 130851696 130851902 -35798394 + B3 SINE B2 1 209 -7 8 1583 321 26 0 0 chrX 130853264 130853302 -35796994 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 8 1583 1167 36 7 0 chrX 130853304 130853444 -35796852 - B1_Mus2 SINE Alu -6 141 1 8 1583 865 225 72 16 chrX 130853468 130853662 -35796634 - B3 SINE B2 -11 205 1 8 1583 967 185 18 114 chrX 130853750 130853970 -35796326 + B3 SINE B2 8 206 -10 8 1583 496 239 115 0 chrX 130854113 130854243 -35796053 - B1_Mur1 SINE Alu 0 149 5 8 1583 454 312 6 70 chrX 130854488 130854660 -35795636 - RSINE1 SINE B4 -3 162 2 8 1583 376 298 0 0 chrX 130854676 130854760 -35795536 - RSINE1 SINE B4 0 165 82 8 1583 217 217 20 80 chrX 130854924 130855024 -35795272 + (TG)n Simple_repeat Simple_repeat 1 94 0 8 1583 362 198 10 141 chrX 130855035 130855241 -35795055 + (TG)n Simple_repeat Simple_repeat 2 180 0 8 1583 235 241 23 92 chrX 130855359 130855533 -35794763 + (TG)n Simple_repeat Simple_repeat 1 162 0 8 1583 337 199 15 129 chrX 130855544 130855746 -35794550 + (TG)n Simple_repeat Simple_repeat 2 180 0 8 1583 630 279 12 12 chrX 130855764 130855924 -35794372 - RSINE1 SINE B4 0 165 6 8 1583 326 310 40 0 chrX 130855937 130856037 -35794259 - PB1D10 SINE Alu -1 116 13 8 1583 238 262 0 16 chrX 130856531 130856593 -35793703 + (TG)n Simple_repeat Simple_repeat 1 61 0 8 1583 610 208 115 0 chrX 130856754 130856884 -35793412 - B1_Mur2 SINE Alu 0 149 5 8 1583 446 33 17 0 chrX 130857078 130857138 -35793158 + (TCCA)n Simple_repeat Simple_repeat 3 63 0 8 1583 664 278 116 0 chrX 130857147 130857320 -35792976 - ID_B1 SINE B4 -16 208 16 8 1583 754 258 30 5 chrX 130857613 130857812 -35792484 - B3 SINE B2 -12 204 1 8 1583 423 36 18 0 chrX 130857842 130857897 -35792399 - ORR1A4 LTR MaLR 0 329 274 8 1583 1684 21 0 0 chrX 130858080 130858271 -35792025 - B2_Mm1t SINE B2 -1 192 2 8 1583 1821 129 3 24 chrX 130858313 130858606 -35791690 - Lx4A LINE L1 -3 7055 6769 8 1583 753 241 21 0 chrX 130858606 130858751 -35791545 + B3 SINE B2 59 206 -10 8 1583 27182 114 23 12 chrX 130860079 130866238 -35784058 - Lx3C LINE L1 -2 6974 742 8 1583 690 319 18 98 chrX 130866296 130866581 -35783715 - B4 SINE B4 -9 283 22 8 1583 260 241 212 24 chrX 130866625 130866710 -35783586 + PB1D9 SINE Alu 18 118 -2 8 1583 357 254 45 0 chrX 130866803 130866913 -35783383 + L1MA4 LINE L1 5363 5477 -820 8 1583 523 256 50 79 chrX 130867044 130867184 -35783112 - RSINE1 SINE B4 -2 163 28 8 1583 525 324 0 0 chrX 130867573 130867721 -35782575 - B1F2 SINE Alu -1 148 1 8 1583 455 219 119 5 chrX 130867738 130867931 -35782365 - L1MA4 LINE L1 -361 5939 5725 8 1583 571 211 121 8 chrX 130867950 130868074 -35782222 - B3 SINE B2 -6 210 73 8 1583 460 212 9 14 chrX 130868099 130868240 -35782056 - L1MA4 LINE L1 -564 5739 5570 8 1583 779 296 59 23 chrX 130868246 130868633 -35781663 + L1MA4 LINE L1 5514 5914 -386 8 1583 1116 252 10 0 chrX 130868860 130869066 -35781230 + ID_B1 SINE B4 2 209 -15 8 1583 1293 188 179 13 chrX 130869186 130869488 -35780808 - MTD LTR MaLR 0 419 68 8 1583 486 236 56 9 chrX 130869628 130869735 -35780561 - B3 SINE B2 -99 117 6 8 1583 343 195 0 125 chrX 130869719 130869807 -35780489 - MTD LTR MaLR -340 81 5 8 1583 678 245 66 0 chrX 130870085 130870236 -35780060 - RSINE1 SINE B4 -3 162 2 8 1583 411 180 19 152 chrX 130870245 130870350 -35779946 - B4 SINE B4 -72 220 130 8 1583 335 289 82 0 chrX 130870376 130870473 -35779823 - B1F2 SINE Alu -44 105 1 8 1583 420 255 28 19 chrX 130870767 130870875 -35779421 - PB1D10 SINE Alu 0 117 9 8 1583 314 244 231 17 chrX 130871363 130871480 -35778816 - B1_Mur1 SINE Alu -7 142 1 8 1583 248 263 40 0 chrX 130871966 130872042 -35778254 - ID4_ SINE ID -4 79 1 8 1583 28 48 0 0 chrX 130872330 130872372 -35777924 + AT_rich Low_complexity Low_complexity 1 42 0 8 1583 240 352 11 0 chrX 130873499 130873590 -35776706 - ID_B1 SINE B4 -132 92 1 8 1583 276 239 0 62 chrX 130873881 130873954 -35776342 - ID4_ SINE ID -13 70 2 8 1583 387 258 192 0 chrX 130873992 130874112 -35776184 - ID_B1 SINE B4 -14 210 68 8 1583 1013 248 181 7 chrX 130874501 130874810 -35775486 - ORR1D2 LTR MaLR -7 363 1 8 1583 204 40 0 0 chrX 130874953 130874978 -35775318 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 8 1583 261 57 0 0 chrX 130875105 130875140 -35775156 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 1583 243 88 0 0 chrX 130875190 130875224 -35775072 + (TTCC)n Simple_repeat Simple_repeat 2 35 0 8 1583 262 308 62 62 chrX 130875228 130875325 -35774971 - B1F SINE Alu -5 144 48 8 1583 311 306 73 18 chrX 130875555 130875665 -35774631 - RLTR40 LTR ERVK 0 817 702 8 1583 2436 169 51 31 chrX 130875667 130876154 -35774142 - RLTR40 LTR ERVK -318 499 3 8 1583 317 406 0 0 chrX 130876226 130876332 -35773964 - PB1D7 SINE Alu -10 110 5 8 1583 234 350 34 0 chrX 130877226 130877343 -35772953 - ID_B1 SINE B4 -20 204 84 8 1583 3944 75 71 2 chrX 130878212 130878762 -35771534 - Lx3_Mus LINE L1 0 7009 6422 8 1583 4121 177 55 97 chrX 130878911 130879572 -35770724 - RMER19B LTR ERVK 0 902 233 8 1583 225 0 0 0 chrX 130879572 130879597 -35770699 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 1583 4121 177 55 97 chrX 130879597 130879874 -35770422 - RMER19B LTR ERVK -670 232 3 8 1583 297 225 225 0 chrX 130879894 130879983 -35770313 + Lx8 LINE L1 7039 7147 -326 8 1583 404 258 178 26 chrX 130880053 130880244 -35770052 + Lx8 LINE L1 7254 7473 0 8 1583 228 67 0 0 chrX 130880292 130880322 -35769974 + (CA)n Simple_repeat Simple_repeat 1 30 0 8 1583 1006 233 159 20 chrX 130880370 130880672 -35769624 - MTEb LTR MaLR -34 345 2 8 1583 417 288 115 12 chrX 130880756 130880921 -35769375 - B3A SINE B2 -16 182 1 8 1583 524 252 50 29 chrX 130881105 130881244 -35769052 - RSINE1 SINE B4 -22 143 2 8 1583 262 252 182 0 chrX 130881271 130881370 -35768926 - ID_B1 SINE B4 0 224 108 8 1583 571 192 92 8 chrX 130881405 130881536 -35768760 + B1_Mur2 SINE Alu 2 143 -6 8 1583 945 224 141 68 chrX 130882521 130882871 -35767425 - MTD LTR MaLR -8 411 1 8 1583 514 276 67 0 chrX 130882879 130883013 -35767283 - ID_B1 SINE B4 -79 145 3 8 1583 319 278 95 116 chrX 130883074 130883166 -35767130 - MT2B2 LTR ERVL -210 374 276 8 1583 1029 198 73 0 chrX 130883166 130883358 -35766938 - B3 SINE B2 -10 206 1 8 1583 584 240 0 0 chrX 130883368 130883482 -35766814 - PB1D9 SINE Alu -7 113 1 8 1583 319 278 95 116 chrX 130883482 130883497 -35766799 - MT2B2 LTR ERVL -309 230 148 8 1583 22 0 0 0 chrX 130883978 130884000 -35766296 + AT_rich Low_complexity Low_complexity 1 22 0 8 1583 370 298 149 0 chrX 130884501 130884642 -35765654 - RSINE1 SINE B4 0 165 4 8 1583 580 325 6 18 chrX 130884813 130884979 -35765317 - RSINE1 SINE B4 0 165 2 8 1583 420 37 0 0 chrX 130885203 130885257 -35765039 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 1583 683 324 127 4 chrX 130885283 130885528 -35764768 - B4A SINE B4 -4 288 14 8 1583 243 262 80 45 chrX 130886284 130886396 -35763900 + ORR1C1 LTR MaLR 88 203 -175 8 1583 288 0 0 0 chrX 130886493 130886525 -35763771 + (TA)n Simple_repeat Simple_repeat 2 33 0 8 1583 221 167 24 0 chrX 130886936 130886978 -35763318 + GA-rich Low_complexity Low_complexity 3 45 0 8 1583 339 242 68 0 chrX 130887035 130887167 -35763129 - L1M4 LINE L1 -721 5457 5317 8 1583 486 88 0 0 chrX 130887172 130887240 -35763056 + (GA)n Simple_repeat Simple_repeat 1 68 0 8 1583 337 234 65 0 chrX 130887254 130887361 -35762935 - L1MA4 LINE L1 -405 5895 5782 8 1583 346 339 152 35 chrX 130887424 130887595 -35762701 - L1M4b LINE L1 -6745 589 399 8 1583 281 38 53 70 chrX 130887944 130888001 -35762295 - B2_Mm2 SINE B2 -3 192 137 8 1583 1174 92 24 6 chrX 130888055 130888220 -35762076 - B2_Mm2 SINE B2 -26 169 2 8 1583 294 331 62 8 chrX 130888289 130888417 -35761879 + MIRb SINE MIR 126 260 -8 8 1583 446 312 56 12 chrX 130888504 130888666 -35761630 + MER20 DNA MER1_type 2 170 -49 8 1583 27 0 0 0 chrX 130888677 130888704 -35761592 + AT_rich Low_complexity Low_complexity 1 27 0 8 1583 448 261 50 0 chrX 130889370 130889489 -35760807 + B1F SINE Alu 25 149 0 8 1583 283 303 173 8 chrX 130889508 130889524 -35760772 - B4A SINE B4 -55 237 157 9 1583 604 200 0 0 chrX 130889524 130889629 -35760667 - PB1D7 SINE Alu -6 114 10 9 1583 283 303 173 8 chrX 130889629 130889641 -35760655 - B4A SINE B4 -55 156 83 9 1583 536 308 0 7 chrX 130889917 130890064 -35760232 - RSINE1 SINE B4 -16 149 4 9 1583 1525 47 0 0 chrX 130890999 130891190 -35759106 - L1Md_F3 LINE L1 0 6584 6394 9 1583 1260 76 1 0 chrX 130891190 130891414 -35758882 + L1Md_Gf LINE L1 969 1289 -5438 9 1583 241 308 46 46 chrX 130891419 130891528 -35758768 - MER2 DNA MER2_type -23 322 214 9 1583 2382 83 18 0 chrX 130891607 130891694 -35758602 - L1_Mus4 LINE L1 -7 6629 6538 9 1583 180 0 0 0 chrX 130891694 130891714 -35758582 + (CCCCCT)n Simple_repeat Simple_repeat 1 20 0 9 1583 2382 83 18 0 chrX 130891714 130891952 -35758344 - L1_Mus4 LINE L1 -99 6537 6299 9 1583 457 244 0 29 chrX 130892040 130892179 -35758117 - MER2 DNA MER2_type -129 216 82 9 1583 347 333 88 7 chrX 130892254 130892402 -35757894 - MER2B DNA MER2_type -171 165 6 9 1583 339 304 13 0 chrX 130892646 130892725 -35757571 + ID4 SINE ID 2 81 -2 9 1583 678 247 118 72 chrX 130893189 130893468 -35756828 + B4 SINE B4 1 292 0 9 1583 941 297 72 38 chrX 130893471 130893856 -35756440 - Lx8 LINE L1 -1548 5925 5498 9 1583 626 215 65 127 chrX 130893856 130894085 -35756211 - B3 SINE B2 0 216 2 9 1583 941 311 130 34 chrX 130894085 130894644 -35755652 - Lx8 LINE L1 -383 5497 4890 9 1583 492 274 142 13 chrX 130894673 130894899 -35755397 + L1M2 LINE L1 2779 3033 -3110 9 1583 659 249 107 0 chrX 130894908 130895085 -35755211 + B3 SINE B2 1 196 -20 9 1583 468 220 35 7 chrX 130895161 130895303 -35754993 + L1M2 LINE L1 3111 3256 -2887 9 1583 229 186 0 0 chrX 130897089 130897132 -35753164 + (TATG)n Simple_repeat Simple_repeat 2 44 0 9 1583 22 0 0 0 chrX 130897188 130897210 -35753086 + AT_rich Low_complexity Low_complexity 1 22 0 9 1583 2357 227 63 28 chrX 130897296 130897934 -35752362 + L1_Mur3 LINE L1 1758 2417 -3463 9 1583 888 241 141 33 chrX 130897947 130898332 -35751964 - MT2A LTR ERVL 0 533 1 9 1583 640 264 6 6 chrX 130898336 130898496 -35751800 + B3 SINE B2 55 214 -2 9 1583 393 216 8 83 chrX 130898589 130898710 -35751586 + L1MD LINE L1 3743 3854 -2292 9 1583 379 221 189 35 chrX 130898733 130898902 -35751394 + L1M4 LINE L1 4481 4675 -1471 9 1583 486 161 0 0 chrX 130899025 130899106 -35751190 - RLTR14 LTR ERV1 -299 83 3 9 1583 983 218 17 0 chrX 130899126 130899305 -35750991 + B3A SINE B2 2 183 -15 9 1583 618 285 51 121 chrX 130899322 130899737 -35750559 + L1M4 LINE L1 4780 5165 -981 9 1583 3353 153 287 14 chrX 130899741 130900570 -35749726 + RMER1B Other Other 2 1056 -10 9 1583 888 170 0 0 chrX 130900617 130900758 -35749538 + B1_Mus2 SINE Alu 5 145 -2 9 1583 640 218 98 10 chrX 130901616 130901820 -35748476 - ID_B1 SINE B4 -1 223 2 9 1583 311 299 10 0 chrX 130902246 130902343 -35747953 - L1M4 LINE L1 -713 5461 5364 9 1583 1315 204 99 69 chrX 130902859 130903291 -35747005 - Lx7 LINE L1 0 7696 7252 9 1583 6577 118 66 1 chrX 130903298 130904283 -35746013 + Lx LINE L1 5606 6654 0 9 1583 1894 238 55 54 chrX 130904341 130905011 -35745285 - Lx7 LINE L1 -577 7119 6449 9 1583 230 323 92 72 chrX 130905084 130905221 -35745075 - ID_B1 SINE B4 -2 222 12 9 1583 250 329 0 0 chrX 130905221 130905291 -35745005 - ID4_ SINE ID -2 81 12 9 1583 526 304 160 10 chrX 130905299 130905698 -35744598 - L1M4 LINE L1 -5493 1049 591 9 1583 571 224 60 0 chrX 130905710 130905844 -35744452 - B1_Mur1 SINE Alu -7 142 1 9 1583 628 292 18 0 chrX 130906731 130906899 -35743397 - ID_B1 SINE B4 -53 171 1 9 1583 422 179 43 26 chrX 130906902 130907017 -35743279 - L1MC5 LINE L1 -471 7490 7374 9 1583 294 209 58 29 chrX 130908165 130908234 -35742062 + B4 SINE B4 172 242 -50 9 1583 357 243 29 9 chrX 130908422 130908524 -35741772 - B1_Mur2 SINE Alu -10 139 2 9 1583 360 0 0 0 chrX 130908563 130908603 -35741693 + (TC)n Simple_repeat Simple_repeat 1 40 0 9 1583 465 19 0 0 chrX 130908603 130908656 -35741640 + (CA)n Simple_repeat Simple_repeat 1 54 0 9 1583 2569 148 15 53 chrX 130908707 130909236 -35741060 + RLTR28 LTR ERVL 1 509 -15 9 1583 406 330 87 74 chrX 130909640 130909829 -35740467 - L1ME3 LINE L1 -42 6131 5933 9 1583 449 247 142 21 chrX 130909829 130910019 -35740277 - B3 SINE B2 -2 214 2 9 1583 406 345 79 67 chrX 130910019 130910369 -35739927 - L1ME3 LINE L1 -230 5932 5585 9 1583 447 276 56 9 chrX 130910475 130910638 -35739658 + L1M5 LINE L1 4703 4872 -1274 9 1583 3450 88 38 0 chrX 130910703 130911182 -35739114 + Lx LINE L1 6158 6654 0 9 1583 1203 36 0 0 chrX 130911197 130911336 -35738960 + B1_Mus1 SINE Alu 2 140 -8 9 1583 549 0 0 0 chrX 130911336 130911397 -35738899 + (CA)n Simple_repeat Simple_repeat 2 62 0 9 1583 426 258 56 131 chrX 130911408 130911430 -35738866 - B4A SINE B4 -2 290 274 9 1583 549 80 0 0 chrX 130911430 130911505 -35738791 + (TG)n Simple_repeat Simple_repeat 1 75 0 9 1583 426 258 56 131 chrX 130911505 130911573 -35738723 - B4A SINE B4 -19 273 222 9 1583 1389 61 0 0 chrX 130911573 130911753 -35738543 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 9 1583 426 258 56 131 chrX 130911753 130911875 -35738421 - B4A SINE B4 -71 221 93 9 1583 240 274 51 34 chrX 130912024 130912141 -35738155 - L1ME3 LINE L1 -980 5166 5048 9 1583 546 252 93 0 chrX 130912192 130912343 -35737953 + MER58A DNA MER1_type 56 220 -4 9 1583 489 296 158 33 chrX 130912343 130912678 -35737618 - L1ME3 LINE L1 -1124 5022 4646 9 1583 396 258 126 0 chrX 130912778 130912936 -35737360 - L1ME3 LINE L1 -1505 4641 4465 9 1583 781 239 101 5 chrX 130913613 130913802 -35736494 + B3 SINE B2 3 209 -7 9 1583 612 196 0 0 chrX 130914295 130914474 -35735822 + CT-rich Low_complexity Low_complexity 2 180 0 9 1583 4666 129 13 11 chrX 130914499 130915253 -35735043 - L1_Mur2 LINE L1 -629 5248 4493 9 1583 3872 193 28 143 chrX 130915276 130915932 -35734364 - L1_Mur2 LINE L1 -3237 2643 1969 9 1583 1903 127 13 0 chrX 130915932 130916246 -35734050 - ORR1A2 LTR MaLR -8 319 2 9 1583 3872 193 28 143 chrX 130916246 130917330 -35732966 - L1_Mur2 LINE L1 -3237 1968 850 9 1583 354 326 106 7 chrX 130917400 130917542 -35732754 - LTR33A LTR ERVL -360 160 5 9 1583 377 292 0 0 chrX 130917573 130917662 -35732634 + PB1D10 SINE Alu 6 94 -23 9 1583 479 247 44 28 chrX 130917684 130917920 -35732376 + Lx7 LINE L1 5732 5974 -1670 9 1583 1062 71 6 19 chrX 130918091 130918249 -35732047 - B2_Mm1t SINE B2 -8 185 30 9 1583 643 275 10 49 chrX 130918264 130918467 -35731829 + B3A SINE B2 2 196 -2 9 1583 348 73 171 0 chrX 130918479 130918542 -35731754 - Lx LINE L1 -429 5868 5763 9 1583 531 177 97 0 chrX 130919126 130919239 -35731057 - L1_Rod LINE L1 -6675 497 374 9 1583 248 152 0 0 chrX 130919399 130919445 -35730851 + T-rich Low_complexity Low_complexity 1 46 0 9 1583 433 302 96 18 chrX 130919849 130920068 -35730228 - L1_Rod LINE L1 -6865 307 72 9 1583 799 291 142 15 chrX 130920143 130920475 -35729821 + Lx8 LINE L1 7100 7473 0 9 1583 975 94 0 0 chrX 130920492 130920630 -35729666 + B1_Mm SINE Alu 10 147 0 9 1583 517 296 62 0 chrX 130921023 130921199 -35729097 + ID_B1 SINE B4 38 224 0 9 1583 261 0 0 0 chrX 130921260 130921289 -35729007 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 1583 432 236 326 45 chrX 130921296 130921520 -35728776 + B4A SINE B4 6 292 0 9 1583 467 325 36 92 chrX 130921902 130922238 -35728058 - MLT1A LTR MaLR -20 354 38 9 1583 4469 188 79 2 chrX 130922291 130922560 -35727736 + Lx5 LINE L1 6151 6428 -622 9 1583 753 73 0 0 chrX 130922560 130922669 -35727627 + (GA)n Simple_repeat Simple_repeat 1 109 0 9 1583 4469 188 79 2 chrX 130922669 130923232 -35727064 + Lx5 LINE L1 6429 7046 -4 9 1583 204 125 0 0 chrX 130923258 130923290 -35727006 + (GGA)n Simple_repeat Simple_repeat 3 34 0 9 1583 1586 53 401 0 chrX 130924865 130925112 -35725184 + ORR1A0 LTR MaLR 1 346 0 9 1583 1166 240 45 39 chrX 130925205 130925513 -35724783 - Lx9 LINE L1 -555 7089 6780 9 1583 1487 252 107 40 chrX 130925504 130925869 -35724427 + Lx9 LINE L1 7106 7471 -173 9 1583 549 30 0 0 chrX 130925869 130925936 -35724360 + (TG)n Simple_repeat Simple_repeat 2 68 0 9 1583 1487 252 107 40 chrX 130925936 130926075 -35724221 + Lx9 LINE L1 7472 7643 -1 9 1583 198 250 47 0 chrX 130926479 130926543 -35723753 - MIRb SINE MIR -19 249 183 9 1583 332 202 21 60 chrX 130926954 130927061 -35723235 - ID2 SINE ID -45 107 6 9 1583 535 278 0 0 chrX 130927065 130927180 -35723116 - PB1D10 SINE Alu -2 115 1 9 1583 1300 148 0 13 chrX 130927386 130927618 -35722678 + Lx2B LINE L1 6769 6997 -3 9 1583 1203 134 5 46 chrX 130927619 130927838 -35722458 + L1Md_F2 LINE L1 6363 6572 -10 9 1583 1499 58 19 5 chrX 130927870 130928077 -35722219 + L1_Mus3 LINE L1 6422 6631 -7 9 1583 1095 297 53 37 chrX 130928394 130928828 -35721468 + Lx8 LINE L1 6785 7225 -248 9 1583 234 239 0 82 chrX 130928833 130928906 -35721390 + RMER15 LTR ERVL 401 467 -108 9 1583 3507 25 2 0 chrX 130929136 130929531 -35720765 - MTA_Mm LTR MaLR 0 396 1 9 1583 264 127 0 0 chrX 130929815 130929870 -35720426 + (T)n Simple_repeat Simple_repeat 1 55 0 9 1583 658 232 78 12 chrX 130930364 130930530 -35719766 + B3 SINE B2 40 216 0 9 1583 438 20 0 0 chrX 130930690 130930741 -35719555 + (GA)n Simple_repeat Simple_repeat 2 52 0 9 1583 334 267 19 28 chrX 130930798 130930906 -35719390 + L1MB7 LINE L1 5523 5629 -555 9 1583 372 280 19 0 chrX 130930906 130931013 -35719283 - BC1_Mm scRNA scRNA -42 110 2 9 1583 523 216 70 23 chrX 130931033 130931161 -35719135 - B1_Mur1 SINE Alu -6 143 10 9 1583 327 246 110 73 chrX 130931197 130931224 -35719072 + L1MB7 LINE L1 5642 5667 -517 9 1583 478 274 26 0 chrX 130931224 130931337 -35718959 + PB1D10 SINE Alu 2 117 0 9 1583 327 246 110 73 chrX 130931337 130931445 -35718851 + L1MB7 LINE L1 5668 5782 -402 9 1583 942 248 61 7 chrX 130931450 130931868 -35718428 + Lx8 LINE L1 6340 6844 -800 9 1583 616 204 98 0 chrX 130931908 130932040 -35718256 - RSINE1 SINE B4 -19 146 2 9 1583 1103 281 127 23 chrX 130932048 130932529 -35717767 + Lx8 LINE L1 6943 7473 0 9 1583 570 249 95 43 chrX 130932541 130932823 -35717473 + L1MB7 LINE L1 5778 6063 -115 9 1583 320 287 123 87 chrX 130933347 130933599 -35716697 - MIRc SINE MIR -3 265 5 9 1583 915 294 87 4 chrX 130934486 130934752 -35715544 + MTEa LTR MaLR 39 326 -53 9 1583 261 0 0 0 chrX 130934753 130934782 -35715514 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 9 1583 615 301 0 41 chrX 130934782 130934874 -35715422 - RSINE1 SINE B4 -1 164 73 9 1583 2539 161 153 24 chrX 130934874 130935383 -35714913 - RMER15 LTR ERVL 0 575 1 9 1583 615 301 0 41 chrX 130935383 130935460 -35714836 - RSINE1 SINE B4 -93 72 2 9 1583 303 207 0 0 chrX 130935460 130935515 -35714781 + MTEa LTR MaLR 317 371 -8 9 1583 234 0 0 0 chrX 130936222 130936248 -35714048 + (TGG)n Simple_repeat Simple_repeat 1 26 0 9 1583 1511 242 66 18 chrX 130936254 130936650 -35713646 - MTD LTR MaLR 0 419 5 9 1583 180 0 0 0 chrX 130936651 130936671 -35713625 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1583 817 253 48 40 chrX 130936741 130937013 -35713283 - B4 SINE B4 -16 276 3 1 1583 821 284 5 5 chrX 130937051 130937256 -35713040 + B3 SINE B2 12 216 0 1 1583 245 27 0 51 chrX 130937404 130937443 -35712853 + (GTTTG)n Simple_repeat Simple_repeat 2 38 0 1 1583 420 146 0 47 chrX 130937447 130937533 -35712763 - B1_Mur4 SINE Alu 0 150 69 1 1583 414 0 0 0 chrX 130937581 130937627 -35712669 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1583 213 94 0 0 chrX 130937674 130937706 -35712590 + (TAA)n Simple_repeat Simple_repeat 1 32 0 1 1583 286 255 221 6 chrX 130937715 130937873 -35712423 + L1MA7 LINE L1 6097 6288 -3 1 1583 520 266 124 10 chrX 130937892 130938079 -35712217 + ID_B1 SINE B4 2 211 -13 1 1583 270 0 0 0 chrX 130938079 130938109 -35712187 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 1 1583 567 66 0 0 chrX 130939281 130939357 -35710939 + (GGA)n Simple_repeat Simple_repeat 1 76 0 1 1583 404 19 19 0 chrX 130939855 130939908 -35710388 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1584 764 240 0 7 chrX 130941194 130941341 -35708955 - RSINE1 SINE B4 -17 148 3 1 1584 677 329 77 41 chrX 130942120 130942637 -35707659 - L1ME3B LINE L1 -184 6056 5521 1 1584 1395 86 11 0 chrX 130942700 130942886 -35707410 - B2_Mm1t SINE B2 -5 188 1 1 1584 1169 257 134 13 chrX 130943491 130943865 -35706431 + MTD LTR MaLR 1 419 0 1 1584 397 331 35 0 chrX 130944130 130944275 -35706021 - MIR SINE MIR -110 152 3 1 1584 480 99 0 0 chrX 130944622 130944693 -35705603 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 1584 327 193 0 0 chrX 130944707 130944764 -35705532 - Lx9 LINE L1 -610 7034 6978 1 1584 723 237 16 53 chrX 130944764 130944951 -35705345 + Lx9 LINE L1 6801 6980 -664 1 1584 524 280 33 9 chrX 130944944 130945157 -35705139 + Lx9 LINE L1 7304 7521 -123 1 1584 796 196 35 0 chrX 130945418 130945561 -35704735 - B1_Mur3 SINE Alu 0 149 2 1 1584 384 132 0 50 chrX 130945562 130945642 -35704654 - L1Md_F3 LINE L1 -7 6577 6502 1 1584 2136 46 11 8 chrX 130945652 130945913 -35704383 + L1_Mus2 LINE L1 6174 6435 -131 1 1584 306 0 0 0 chrX 130946110 130946144 -35704152 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1584 229 322 72 19 chrX 130946252 130946427 -35703869 + MIR SINE MIR 2 194 -74 1 1584 564 224 0 0 chrX 130946456 130946590 -35703706 + (TA)n Simple_repeat Simple_repeat 2 135 0 1 1584 322 294 55 0 chrX 130946602 130946711 -35703585 - PB1D10 SINE Alu -2 115 1 1 1584 799 264 18 181 chrX 130946790 130946836 -35703460 - MTE2a LTR MaLR 0 379 344 1 1584 844 206 54 0 chrX 130946836 130947020 -35703276 + B3A SINE B2 1 194 -4 1 1584 799 264 18 181 chrX 130947020 130947117 -35703179 - MTE2a LTR MaLR -36 343 274 1 1584 5911 8 0 0 chrX 130947117 130947762 -35702534 + L1Md_T LINE L1 5938 6582 0 1 1584 1603 196 139 19 chrX 130947770 130948145 -35702151 + MTC LTR MaLR 2 421 0 1 1584 799 264 18 181 chrX 130948145 130948444 -35701852 - MTE2a LTR MaLR -106 273 1 1 1584 1010 214 10 5 chrX 130948567 130948774 -35701522 + B3 SINE B2 4 211 -5 1 1584 21 36 0 0 chrX 130949113 130949141 -35701155 + AT_rich Low_complexity Low_complexity 1 28 0 1 1584 403 292 19 9 chrX 130949141 130949248 -35701048 + PB1D10 SINE Alu 1 108 -9 1 1584 279 235 0 0 chrX 130949258 130949309 -35700987 + ID4 SINE ID 4 54 -29 1 1584 423 78 0 0 chrX 130949320 130949384 -35700912 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 1584 261 0 0 0 chrX 130949428 130949457 -35700839 + (TTAA)n Simple_repeat Simple_repeat 1 29 0 1 1584 463 326 7 21 chrX 130949475 130949619 -35700677 - RSINE1 SINE B4 -17 148 7 1 1584 525 16 0 0 chrX 130949623 130949685 -35700611 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 1584 201 138 0 0 chrX 130949821 130949850 -35700446 + (CTTG)n Simple_repeat Simple_repeat 2 30 0 1 1584 324 296 28 0 chrX 130949857 130949965 -35700331 - ID_B1 SINE B4 -1 223 113 1 1584 854 266 153 31 chrX 130950112 130950416 -35699880 + Lx8 LINE L1 7067 7412 -61 1 1584 405 0 0 0 chrX 130950416 130950461 -35699835 + (GA)n Simple_repeat Simple_repeat 1 45 0 1 1584 854 266 153 31 chrX 130950461 130950509 -35699787 + Lx8 LINE L1 7413 7462 -11 1 1584 715 182 0 22 chrX 130950676 130950811 -35699485 - B1_Mur3 SINE Alu -10 139 8 1 1584 416 299 43 14 chrX 130950919 130951058 -35699238 - B1F2 SINE Alu 0 149 7 1 1584 632 143 9 0 chrX 130951093 130951205 -35699091 + T-rich Low_complexity Low_complexity 2 114 0 1 1584 1217 61 0 0 chrX 130951207 130951354 -35698942 - B1_Mus1 SINE Alu 0 148 2 1 1584 379 299 101 6 chrX 130951757 130951935 -35698361 - MIR SINE MIR -54 208 14 1 1584 618 132 104 0 chrX 130952368 130952474 -35697822 - B1_Mur4 SINE Alu 0 150 34 1 1584 362 115 84 60 chrX 130952403 130952486 -35697810 - MT2B LTR ERVL -344 257 173 1 1584 21 36 0 0 chrX 130952486 130952514 -35697782 + AT_rich Low_complexity Low_complexity 1 28 0 1 1584 7381 57 1 40 chrX 130952515 130953241 -35697055 - L1_Mus2 LINE L1 -1 6565 5876 1 1584 1090 59 22 0 chrX 130953241 130953376 -35696920 - B1_Mm SINE Alu -9 138 1 1 1584 7381 57 1 40 chrX 130953376 130953630 -35696666 - L1_Mus2 LINE L1 -691 5875 5623 1 1584 341 345 8 8 chrX 130953791 130953908 -35696388 - RSINE1 SINE B4 -47 118 2 1 1584 252 0 0 0 chrX 130954165 130954193 -35696103 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1 1584 1424 174 129 3 chrX 130954541 130954858 -35695438 - ORR1B1 LTR MaLR -37 357 1 1 1584 278 286 0 0 chrX 130955008 130955071 -35695225 + ID4 SINE ID 16 78 -5 1 1584 304 324 0 0 chrX 130955109 130955183 -35695113 + ID4_ SINE ID 2 75 -8 1 1584 326 191 0 16 chrX 130955266 130955330 -35694966 - PB1D9 SINE Alu -37 83 21 1 1584 251 338 13 0 chrX 130956287 130956364 -35693932 + L2c LINE L2 2814 2891 -528 1 1584 207 361 99 22 chrX 130956420 130956692 -35693604 + L2c LINE L2 3054 3346 -41 1 1584 725 214 0 3 chrX 130956846 130957159 -35693137 + (TG)n Simple_repeat Simple_repeat 1 311 0 1 1584 972 198 2 0 chrX 130957181 130957674 -35692622 + (TG)n Simple_repeat Simple_repeat 1 494 0 1 1584 745 237 147 21 chrX 130957775 130957965 -35692331 - B4 SINE B4 -78 214 1 1 1584 226 48 70 23 chrX 130958789 130958832 -35691464 + (TCTCCC)n Simple_repeat Simple_repeat 3 47 0 1 1584 273 163 0 0 chrX 130958909 130958958 -35691338 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1584 2829 78 39 3 chrX 130958960 130959346 -35690950 - MTB LTR MaLR 0 400 1 1 1584 270 0 0 0 chrX 130959346 130959376 -35690920 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1584 369 58 0 0 chrX 130959720 130959772 -35690524 + (T)n Simple_repeat Simple_repeat 1 52 0 1 1584 198 0 0 0 chrX 130961209 130961231 -35689065 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1584 382 262 18 18 chrX 130963290 130963399 -35686897 - B1_Mus2 SINE Alu -38 109 1 1 1584 187 221 100 44 chrX 130963474 130963564 -35686732 + MIRc SINE MIR 147 241 -27 1 1584 306 0 0 0 chrX 130963647 130963681 -35686615 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 1 1584 706 256 60 5 chrX 130963681 130963881 -35686415 - ID_B1 SINE B4 -12 212 2 1 1584 282 224 75 50 chrX 130965636 130965716 -35684580 - B1F1 SINE Alu 0 149 68 1 1584 510 170 0 0 chrX 130965867 130965961 -35684335 + (TA)n Simple_repeat Simple_repeat 2 95 0 1 1584 518 175 9 0 chrX 130966435 130966549 -35683747 + GA-rich Low_complexity Low_complexity 2 116 0 1 1584 261 75 0 0 chrX 130967289 130967329 -35682967 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1 1584 1255 34 0 0 chrX 130967457 130967603 -35682693 - B1_Mm SINE Alu 0 147 2 1 1584 289 291 162 12 chrX 130967684 130967931 -35682365 + L1MD2 LINE L1 6076 6359 0 1 1584 434 333 20 0 chrX 130967942 130968092 -35682204 + RSINE1 SINE B4 2 154 -11 1 1584 502 320 97 27 chrX 130969958 130970257 -35680039 - L2a LINE L2 -34 3392 3073 1 1584 337 315 202 18 chrX 130970266 130970674 -35679622 - L2a LINE L2 -273 3153 2659 1 1584 182 194 0 0 chrX 130970715 130970751 -35679545 + L2a LINE L2 3374 3409 -17 1 1584 843 218 88 5 chrX 130971267 130971461 -35678835 + B3 SINE B2 2 211 -5 1 1584 396 0 0 0 chrX 130971851 130971895 -35678401 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1584 323 273 89 24 chrX 130972061 130972185 -35678111 + L1MA10 LINE L1 5748 5879 -412 1 1584 528 277 38 71 chrX 130972181 130972469 -35677827 + L1MA10 LINE L1 6007 6283 -51 1 1584 258 271 194 29 chrX 130972764 130972939 -35677357 - L1M5 LINE L1 -420 5820 5617 1 1584 189 0 0 0 chrX 130973332 130973353 -35676943 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1584 180 77 0 0 chrX 130973650 130973676 -35676620 + (TCCG)n Simple_repeat Simple_repeat 4 29 0 1 1584 242 276 53 0 chrX 130974037 130974113 -35676183 + ID4_ SINE ID 2 81 -2 1 1584 415 82 14 14 chrX 130975343 130975417 -35674879 + (TC)n Simple_repeat Simple_repeat 1 74 0 1 1584 942 168 5 46 chrX 130976841 130977035 -35673261 + B2_Mm2 SINE B2 1 186 -9 1 1584 230 315 206 18 chrX 130977169 130977334 -35672962 - RMER30 DNA MER1_type -2 200 5 1 1584 1157 184 19 5 chrX 130978899 130979112 -35671184 - B3 SINE B2 0 216 1 1 1584 514 256 56 0 chrX 130979414 130979539 -35670757 + RSINE1 SINE B4 3 134 -31 1 1584 378 0 0 0 chrX 130979735 130979777 -35670519 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1584 603 188 27 0 chrX 130979798 130979910 -35670386 + B3 SINE B2 2 116 -100 1 1584 662 314 23 4 chrX 130979970 130980229 -35670067 - Lx9 LINE L1 -130 7514 7251 1 1584 276 241 0 0 chrX 130980241 130980295 -35670001 + Lx8 LINE L1 6876 6929 -544 1 1584 399 299 40 20 chrX 130980314 130980464 -35669832 + Lx9 LINE L1 7121 7273 -371 1 1584 399 315 23 28 chrX 130982560 130982774 -35667522 + MIRb SINE MIR 35 259 -3 1 1584 189 0 0 0 chrX 130982888 130982909 -35667387 + (CAAAA)n Simple_repeat Simple_repeat 1 21 0 1 1584 420 20 0 0 chrX 130982961 130983010 -35667286 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1584 237 333 37 30 chrX 130983129 130983293 -35667003 - MER5A1 DNA MER1_type 0 166 2 1 1584 568 299 27 22 chrX 130983335 130983557 -35666739 + Charlie10 DNA MER1_type 35 257 -2565 1 1584 697 240 67 127 chrX 130984785 130984829 -35665467 + B4 SINE B4 42 79 -213 1 1584 354 45 0 0 chrX 130984829 130984873 -35665423 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 1584 697 240 67 127 chrX 130984873 130985095 -35665201 + B4 SINE B4 80 292 0 1 1584 315 288 126 12 chrX 130985246 130985376 -35664920 + MIR SINE MIR 31 159 -103 1 1584 471 289 12 42 chrX 130985390 130985556 -35664740 + B3A SINE B2 38 198 0 1 1584 507 284 12 47 chrX 130985568 130985738 -35664558 + RSINE1 SINE B4 2 165 0 1 1584 901 18 0 0 chrX 130985987 130986098 -35664198 - B1_Mus1 SINE Alu -12 136 26 1 1584 507 17 0 0 chrX 130988097 130988157 -35662139 + (TC)n Simple_repeat Simple_repeat 2 61 0 1 1584 210 191 0 0 chrX 130988624 130988666 -35661630 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 1584 22 0 0 0 chrX 130991542 130991564 -35658732 + AT_rich Low_complexity Low_complexity 1 22 0 1 1584 831 322 116 22 chrX 130991616 130991699 -35658597 - LTR75 LTR ERVL -50 512 424 1 1584 3432 33 2 0 chrX 130991699 130992094 -35658202 - MTA_Mm LTR MaLR 0 396 1 1 1584 831 322 116 22 chrX 130992094 130992458 -35657838 - LTR75 LTR ERVL -139 423 24 1 1584 1219 62 81 38 chrX 130993600 130993785 -35656511 + B2_Mm2 SINE B2 3 195 0 1 1584 598 323 65 53 chrX 130993800 130994140 -35656156 + MLT1A0 LTR MaLR 19 362 -3 1 1584 380 196 42 32 chrX 130994666 130994761 -35655535 - PB1D10 SINE Alu -1 116 21 1 1584 189 0 0 0 chrX 130995956 130995977 -35654319 + (CAA)n Simple_repeat Simple_repeat 2 22 0 1 1584 254 210 77 39 chrX 130996399 130996503 -35653793 - Lx9 LINE L1 -142 7502 7395 1 1584 285 146 0 0 chrX 130996808 130996856 -35653440 + (T)n Simple_repeat Simple_repeat 1 48 0 1 1584 292 293 0 10 chrX 130998193 130998293 -35652003 + L1M4 LINE L1 5684 5782 -396 1 1584 344 257 136 9 chrX 130998391 130998501 -35651795 + RSINE1 SINE B4 4 127 -38 1 1584 180 0 0 0 chrX 130998523 130998543 -35651753 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 1584 24 0 0 0 chrX 130998545 130998569 -35651727 + AT_rich Low_complexity Low_complexity 1 24 0 1 1584 32 0 0 0 chrX 130999547 130999579 -35650717 + AT_rich Low_complexity Low_complexity 1 32 0 1 1584 608 267 15 0 chrX 130999700 130999835 -35650461 - B1_Mur1 SINE Alu -12 137 1 1 1584 198 150 0 0 chrX 131000571 131000611 -35649685 + (CAT)n Simple_repeat Simple_repeat 3 42 0 1 1584 807 256 103 11 chrX 131002637 131002898 -35647398 + L1MD LINE L1 4567 4851 -1295 2 1584 338 272 185 16 chrX 131002941 131003195 -35647101 + L1MD LINE L1 4941 5237 -909 2 1584 556 228 89 6 chrX 131003210 131003378 -35646918 + L1MD LINE L1 5428 5609 -750 2 1584 247 227 76 0 chrX 131003381 131003447 -35646849 + RSINE1 SINE B4 3 73 -219 3 1584 677 270 57 21 chrX 131003541 131003734 -35646562 + ID_B1 SINE B4 18 217 -7 4 1584 228 35 0 0 chrX 131003802 131003831 -35646465 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1584 684 249 142 11 chrX 131003837 131004020 -35646276 + B3 SINE B2 5 211 -5 6 1584 265 208 57 0 chrX 131004045 131004098 -35646198 + L1MD LINE L1 5616 5671 -571 2 1584 700 109 0 26 chrX 131004098 131004211 -35646085 - B1_Mus1 SINE Alu -9 139 30 7 1584 453 241 27 36 chrX 131004420 131004532 -35645764 - PB1D7 SINE Alu -8 112 2 8 1584 207 308 0 0 chrX 131005205 131005257 -35645039 + C-rich Low_complexity Low_complexity 1 52 0 9 1584 764 295 19 0 chrX 131005714 131005924 -35644372 + ID_B1 SINE B4 5 218 -6 1 1584 193 29 29 29 chrX 131006371 131006406 -35643890 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1584 258 154 0 25 chrX 131006407 131006447 -35643849 + Lx4B LINE L1 6871 6909 -149 1 1584 237 179 167 0 chrX 131008158 131008236 -35642060 + Lx8 LINE L1 7383 7473 0 1 1584 210 275 11 21 chrX 131009798 131009891 -35640405 + G-rich Low_complexity Low_complexity 1 92 0 1 1584 569 231 93 17 chrX 131011429 131011601 -35638695 + B3A SINE B2 1 185 -13 1 1584 207 0 0 0 chrX 131011699 131011722 -35638574 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1 1584 1113 90 0 0 chrX 131011722 131011867 -35638429 - B1_Mus1 SINE Alu -3 145 1 1 1584 875 174 172 11 chrX 131012499 131012685 -35637611 - B3 SINE B2 0 216 1 1 1584 1469 261 81 73 chrX 131012723 131013381 -35636915 - L1MA4 LINE L1 -382 5918 5256 1 1584 238 291 120 57 chrX 131013385 131013430 -35636866 - B3 SINE B2 -15 201 16 2 1584 453 331 31 0 chrX 131013430 131013560 -35636736 - RSINE1 SINE B4 -15 150 17 2 1584 350 192 82 0 chrX 131013604 131013677 -35636619 - ID4_ SINE ID -1 82 4 2 1584 611 282 70 54 chrX 131013706 131014161 -35636135 - L1MA8 LINE L1 -349 6644 6191 2 1584 210 37 0 0 chrX 131014164 131014191 -35636105 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1584 241 348 52 42 chrX 131014196 131014292 -35636004 - B1F SINE Alu -8 141 45 2 1584 814 193 0 45 chrX 131014322 131014479 -35635817 - B1_Mur4 SINE Alu 0 150 1 2 1584 268 307 69 0 chrX 131014583 131014684 -35635612 - B1F SINE Alu -6 143 36 2 1584 425 219 177 83 chrX 131014686 131015000 -35635296 - L1MA8 LINE L1 -794 6205 5868 2 1584 1142 55 0 40 chrX 131015000 131015152 -35635144 - B1_Mus2 SINE Alu -1 146 1 2 1584 340 295 91 43 chrX 131015152 131015288 -35635008 - L1MA8 LINE L1 -978 5867 5721 2 1584 940 215 6 0 chrX 131015290 131015467 -35634829 - B3 SINE B2 -38 178 1 2 1584 1471 70 5 0 chrX 131015492 131015677 -35634619 - B2_Mm2 SINE B2 -9 186 1 3 1584 518 322 88 35 chrX 131015755 131016325 -35633971 - L1MA8 LINE L1 -4098 2751 2152 2 1584 451 255 57 123 chrX 131016665 131016798 -35633498 + RMER15 LTR ERVL 329 452 -123 3 1584 504 0 0 0 chrX 131016798 131016854 -35633442 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 1584 451 255 57 123 chrX 131016854 131016948 -35633348 + RMER15 LTR ERVL 453 541 -34 3 1584 749 263 29 24 chrX 131017322 131017532 -35632764 - B3 SINE B2 -5 211 1 3 1584 4174 214 63 10 chrX 131018136 131018686 -35631610 - Lx6 LINE L1 -4 7456 6897 3 1584 1525 0 0 14 chrX 131018686 131018895 -35631401 + (TCTCCC)n Simple_repeat Simple_repeat 1 205 0 3 1584 4174 214 63 10 chrX 131018895 131019222 -35631074 - Lx6 LINE L1 -564 6896 6534 3 1584 958 160 0 0 chrX 131019224 131019368 -35630928 + Lx6 LINE L1 6375 6518 -942 3 1584 276 30 0 0 chrX 131019400 131019433 -35630863 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 3 1584 1945 142 0 22 chrX 131019473 131019796 -35630500 - Lx LINE L1 -4 6650 6335 3 1584 739 193 35 7 chrX 131020823 131020964 -35629332 - B1_Mur1 SINE Alu 0 149 5 3 1584 22 0 0 0 chrX 131021029 131021051 -35629245 + AT_rich Low_complexity Low_complexity 1 22 0 3 1584 1536 273 62 33 chrX 131021222 131021881 -35628415 - L1M2 LINE L1 -1613 5229 4552 4 1584 980 253 114 54 chrX 131021986 131022337 -35627959 - L1M2 LINE L1 -2579 4266 3893 4 1584 1182 47 0 39 chrX 131022337 131022491 -35627805 - B1_Mus1 SINE Alu 0 148 1 4 1584 980 253 114 54 chrX 131022491 131022729 -35627567 - L1M2 LINE L1 -2953 3892 3642 4 1584 1773 145 0 14 chrX 131023172 131023459 -35626837 + Lx2A1 LINE L1 5514 5796 -87 4 1584 6212 106 3 6 chrX 131025549 131026423 -35623873 + Lx LINE L1 5783 6654 0 4 1584 31 44 0 0 chrX 131026424 131026469 -35623827 + AT_rich Low_complexity Low_complexity 1 45 0 4 1584 198 0 0 0 chrX 131026485 131026507 -35623789 + (TA)n Simple_repeat Simple_repeat 2 23 0 4 1584 7150 95 55 21 chrX 131026508 131027643 -35622653 + Lx2A1 LINE L1 5835 7008 0 4 1584 517 71 188 0 chrX 131027647 131027732 -35622564 + B1_Mus2 SINE Alu 47 147 0 4 1584 299 130 19 0 chrX 131027732 131027786 -35622510 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 4 1584 1198 114 23 0 chrX 131027794 131027970 -35622326 + B2_Mm2 SINE B2 2 181 -14 4 1584 351 122 0 5 chrX 131028007 131028072 -35622224 + B2_Mm2 SINE B2 47 109 -107 4 1584 5980 63 13 5 chrX 131028113 131028974 -35621322 - RLTR13A3 LTR ERVK 0 978 111 5 1584 2379 227 87 61 chrX 131028984 131029915 -35620381 - RMER1B Other Other -9 1057 1 5 1584 464 344 13 19 chrX 131030133 131030287 -35620009 - RSINE1 SINE B4 -11 154 2 5 1584 273 316 87 35 chrX 131030304 131030674 -35619622 - L1M2 LINE L1 -4907 1942 1554 4 1584 438 20 0 0 chrX 131031016 131031067 -35619229 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1584 269 299 88 61 chrX 131031223 131031337 -35618959 + PB1D7 SINE Alu 1 117 0 5 1584 481 247 0 0 chrX 131031350 131031443 -35618853 + U6 snRNA snRNA 3 95 -12 5 1584 27 62 0 0 chrX 131031850 131031898 -35618398 + AT_rich Low_complexity Low_complexity 1 48 0 5 1584 1643 32 0 0 chrX 131031903 131032090 -35618206 + B2_Mm1a SINE B2 2 188 -5 5 1584 7396 55 13 14 chrX 131032106 131033051 -35617245 + L1Md_F2 LINE L1 5635 6578 -4 5 1584 710 150 63 0 chrX 131033147 131033274 -35617022 + B1_Mur3 SINE Alu 14 148 -1 5 1584 235 0 57 0 chrX 131033746 131033781 -35616515 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 6 1584 1425 74 10 10 chrX 131033786 131033978 -35616318 + B2_Mm2 SINE B2 2 193 -2 6 1584 876 159 0 0 chrX 131033978 131034135 -35616161 + GA-rich Low_complexity Low_complexity 1 157 0 6 1584 610 200 0 0 chrX 131035043 131035163 -35615133 + MTD LTR MaLR 1 120 -299 6 1584 312 27 0 0 chrX 131035175 131035212 -35615084 + (TCC)n Simple_repeat Simple_repeat 3 39 0 6 1584 4252 35 0 0 chrX 131036253 131036739 -35613557 + L1Md_F2 LINE L1 6078 6563 -19 6 1584 23 0 0 0 chrX 131036739 131036762 -35613534 + AT_rich Low_complexity Low_complexity 1 23 0 6 1584 956 193 207 8 chrX 131037067 131037318 -35612978 + MTD LTR MaLR 119 419 0 6 1584 4337 56 0 4 chrX 131037565 131038104 -35612192 - L1Md_F2 LINE L1 0 6582 6046 6 1584 24 0 0 0 chrX 131038667 131038691 -35611605 + AT_rich Low_complexity Low_complexity 1 24 0 6 1584 1323 77 65 16 chrX 131039516 131039701 -35610595 - B2_Mm2 SINE B2 -1 194 1 6 1584 1063 169 146 0 chrX 131040003 131040216 -35610080 - Lx3C LINE L1 -1 6975 6732 7 1584 5248 135 8 40 chrX 131040214 131040522 -35609774 + Lx3C LINE L1 5045 5350 -536 7 1584 4604 94 2 0 chrX 131040522 131041147 -35609149 + Lx2 LINE L1 6371 6996 -1 7 1584 7132 134 23 16 chrX 131041147 131042535 -35607761 + Lx3C LINE L1 5351 6729 -247 7 1584 821 211 94 87 chrX 131042835 131043100 -35607196 + RMER1C Other Other 1068 1334 -8 7 1584 333 275 199 0 chrX 131043829 131043960 -35606336 - B3 SINE B2 -51 165 9 7 1584 225 0 0 0 chrX 131044100 131044125 -35606171 + (A)n Simple_repeat Simple_repeat 1 25 0 7 1584 468 224 28 9 chrX 131044134 131044242 -35606054 + B3A SINE B2 1 110 -88 7 1584 27 29 0 0 chrX 131044351 131044385 -35605911 + AT_rich Low_complexity Low_complexity 1 34 0 7 1584 266 326 10 0 chrX 131044404 131044502 -35605794 + ID_B1 SINE B4 125 223 -1 7 1584 23 0 0 0 chrX 131044580 131044603 -35605693 + AT_rich Low_complexity Low_complexity 1 23 0 7 1584 435 223 43 65 chrX 131044640 131044779 -35605517 - B1F SINE Alu 0 149 14 8 1584 1136 86 0 0 chrX 131044824 131044975 -35605321 - L1_Mus3 LINE L1 -500 6138 5988 8 1584 3075 86 115 4 chrX 131044976 131045446 -35604850 + L1_Mus3 LINE L1 6116 6637 -1 8 1584 1360 81 0 0 chrX 131045474 131045648 -35604648 - L1_Mm LINE L1 -381 5502 5329 8 1584 500 319 7 28 chrX 131045805 131045947 -35604349 + RSINE1 SINE B4 11 149 -16 8 1584 737 110 8 0 chrX 131045955 131046073 -35604223 + (TCCA)n Simple_repeat Simple_repeat 3 121 0 8 1584 191 36 36 0 chrX 131046124 131046152 -35604144 + (TCTA)n Simple_repeat Simple_repeat 3 31 0 8 1584 425 269 18 27 chrX 131046240 131046351 -35603945 + PB1D10 SINE Alu 1 110 -7 8 1584 234 191 114 29 chrX 131046444 131046514 -35603782 - PB1D10 SINE Alu -21 96 21 8 1584 251 333 0 151 chrX 131046871 131047021 -35603275 - MT2A LTR ERVL -102 431 307 8 1584 534 146 0 0 chrX 131047021 131047110 -35603186 + RLTR14 LTR ERV1 1 89 -293 8 1584 2573 156 57 81 chrX 131047110 131047588 -35602708 + RLTR20D LTR ERVK 3 462 -106 9 1584 540 30 0 0 chrX 131047588 131047654 -35602642 + (TG)n Simple_repeat Simple_repeat 2 67 0 9 1584 2573 156 57 81 chrX 131047654 131047755 -35602541 + RLTR20D LTR ERVK 463 567 -1 9 1584 1147 160 174 12 chrX 131047755 131048014 -35602282 + RLTR14 LTR ERV1 82 382 0 8 1584 237 317 35 104 chrX 131048126 131048327 -35601969 - MTE2b LTR MaLR -188 191 5 9 1584 342 260 0 8 chrX 131048342 131048430 -35601866 - ID4 SINE ID -60 92 8 9 1584 801 200 7 0 chrX 131048664 131048804 -35601492 + B1_Mus2 SINE Alu 1 141 -6 9 1584 966 173 3 19 chrX 131048904 131049100 -35601196 - ORR1C1 LTR MaLR -127 251 33 9 1584 723 155 23 15 chrX 131049130 131049261 -35601035 - RLTR14-int LTR ERV1 -335 4982 4851 9 1584 475 182 22 11 chrX 131049243 131049332 -35600964 + RLTR14-int LTR ERV1 5228 5317 0 9 1584 374 179 0 0 chrX 131049360 131049427 -35600869 + B1_Mus2 SINE Alu 73 139 -8 9 1584 254 150 57 24 chrX 131049427 131049550 -35600746 + (TA)n Simple_repeat Simple_repeat 2 128 0 9 1584 387 185 31 42 chrX 131049562 131049658 -35600638 + B3 SINE B2 122 216 0 1 1584 265 210 97 0 chrX 131049689 131049751 -35600545 - B1F2 SINE Alu -67 82 15 1 1584 1695 31 0 0 chrX 131049753 131049945 -35600351 - B2_Mm1t SINE B2 0 193 2 1 1584 273 308 67 0 chrX 131050026 131050130 -35600166 + MIRb SINE MIR 116 226 -42 1 1584 489 267 25 8 chrX 131050518 131050639 -35599657 + RSINE1 SINE B4 3 125 -40 1 1584 197 65 32 0 chrX 131050639 131050670 -35599626 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1584 201 182 0 0 chrX 131050708 131050741 -35599555 + (TAA)n Simple_repeat Simple_repeat 2 34 0 1 1584 214 186 0 0 chrX 131051077 131051120 -35599176 + T-rich Low_complexity Low_complexity 1 43 0 1 1584 399 239 120 23 chrX 131051120 131051253 -35599043 - B1F SINE Alu 0 149 4 1 1584 272 265 44 97 chrX 131051153 131051266 -35599030 - MT2B2 LTR ERVL -326 258 152 1 1584 443 63 0 16 chrX 131051331 131051395 -35598901 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 1 1584 303 270 112 0 chrX 131051400 131051489 -35598807 - ID_B1 SINE B4 -5 219 121 1 1584 1724 160 6 46 chrX 131051907 131052234 -35598062 - ORR1B1 LTR MaLR -79 315 2 1 1584 381 242 0 124 chrX 131052519 131052656 -35597640 - B4A SINE B4 -50 242 123 1 1584 665 261 7 0 chrX 131052716 131052858 -35597438 + B1_Mur1 SINE Alu 2 144 -5 1 1584 452 193 9 0 chrX 131052862 131052971 -35597325 + GA-rich Low_complexity Low_complexity 2 111 0 1 1584 854 237 40 0 chrX 131052972 131053170 -35597126 + B3 SINE B2 1 206 -10 1 1584 1194 61 0 7 chrX 131053416 131053564 -35596732 + B1_Mus2 SINE Alu 1 147 0 1 1584 201 108 0 0 chrX 131053564 131053601 -35596695 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 1 1584 4574 146 25 11 chrX 131053657 131054488 -35595808 + RMER12 LTR ERVK 48 890 -432 1 1584 666 87 0 0 chrX 131054488 131054591 -35595705 + (TG)n Simple_repeat Simple_repeat 1 103 0 1 1584 326 278 152 111 chrX 131054625 131054941 -35595355 + RMER12 LTR ERVK 994 1322 0 1 1584 429 20 0 0 chrX 131055060 131055110 -35595186 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1584 244 203 169 0 chrX 131055114 131055173 -35595123 - Lx9 LINE L1 -171 7473 7405 1 1584 21 0 0 0 chrX 131055225 131055246 -35595050 + AT_rich Low_complexity Low_complexity 1 21 0 1 1584 3656 148 34 24 chrX 131055257 131056254 -35594042 - RLTR13D1 LTR ERVK 0 1023 1 1 1584 211 262 32 32 chrX 131056585 131056648 -35593648 + B4 SINE B4 87 149 -143 1 1584 684 290 85 19 chrX 131056645 131056856 -35593440 - B4A SINE B4 -66 226 2 1 1584 250 214 57 0 chrX 131056881 131056951 -35593345 + ID4_ SINE ID 9 82 -1 1 1584 23 78 0 0 chrX 131056961 131057012 -35593284 + AT_rich Low_complexity Low_complexity 1 51 0 1 1584 1385 92 5 0 chrX 131057023 131057208 -35593088 + B2_Mm2 SINE B2 1 186 -9 1 1584 894 258 273 3 chrX 131057514 131057844 -35592452 + MTD LTR MaLR 1 419 0 1 1584 287 316 97 42 chrX 131057905 131058143 -35592153 - L1MC LINE L1 -2186 5696 5446 1 1584 548 253 46 40 chrX 131058618 131058674 -35591622 + MLT2B2 LTR ERVL 6 64 -451 1 1584 2900 114 69 11 chrX 131058674 131059152 -35591144 + RLTR19C LTR ERVK 1 506 0 1 1584 548 253 46 40 chrX 131059152 131059268 -35591028 + MLT2B2 LTR ERVL 65 179 -336 1 1584 464 254 21 42 chrX 131059417 131059561 -35590735 - RSINE1 SINE B4 -24 141 1 1 1584 437 246 97 0 chrX 131059562 131059696 -35590600 - B1F2 SINE Alu -2 147 1 1 1584 363 291 0 0 chrX 131060400 131060486 -35589810 + ID_B1 SINE B4 82 167 -57 1 1584 292 277 27 90 chrX 131060486 131060511 -35589785 + PB1D10 SINE Alu 1 104 -13 1 1584 225 0 0 0 chrX 131060511 131060536 -35589760 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1 1584 1087 55 0 27 chrX 131060605 131060774 -35589522 + L1Md_F3 LINE L1 6415 6584 0 1 1584 237 325 0 12 chrX 131060999 131061080 -35589216 - ID2 SINE ID -1 82 3 1 1584 286 297 0 21 chrX 131061089 131061182 -35589114 - PB1D10 SINE Alu -2 115 25 1 1584 6817 65 4 3 chrX 131061351 131062227 -35588069 + L1_Mus2 LINE L1 5702 6565 -1 1 1584 234 0 0 0 chrX 131062229 131062255 -35588041 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 1 1584 347 109 0 0 chrX 131062273 131062328 -35587968 - B2_Mm2 SINE B2 -94 101 47 1 1584 1246 102 11 0 chrX 131062380 131062556 -35587740 - B2_Mm1t SINE B2 -14 179 2 1 1584 603 262 0 14 chrX 131062707 131062850 -35587446 + ID_B1 SINE B4 84 224 0 1 1584 265 277 15 0 chrX 131062891 131062956 -35587340 + Lx8 LINE L1 7253 7318 -155 1 1584 228 182 0 0 chrX 131063061 131063105 -35587191 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1584 306 221 0 0 chrX 131063180 131063248 -35587048 - B3 SINE B2 -7 209 142 1 1584 1119 174 289 93 chrX 131063251 131063980 -35586316 - RMER6C LTR ERVK 0 720 1 1 1584 576 272 0 0 chrX 131063985 131064110 -35586186 - B3 SINE B2 -87 129 5 1 1584 1424 65 16 31 chrX 131064128 131064320 -35585976 + B2_Mm2 SINE B2 1 189 -6 1 1584 207 0 0 0 chrX 131064324 131064347 -35585949 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1 1584 397 224 23 34 chrX 131064349 131064437 -35585859 - B1_Mur4 SINE Alu -13 137 51 1 1584 372 133 176 11 chrX 131064435 131064526 -35585770 + B2_Mm2 SINE B2 75 180 -15 1 1584 2468 123 178 9 chrX 131064558 131064985 -35585311 - RLTR19 LTR ERVK 0 499 1 1 1584 6961 105 49 12 chrX 131065055 131066587 -35583709 + Lx LINE L1 5069 6640 -14 1 1584 1232 41 7 0 chrX 131066587 131066734 -35583562 + B1_Mus1 SINE Alu 1 148 0 1 1584 6961 96 55 18 chrX 131066734 131066747 -35583549 + Lx LINE L1 6641 6653 -1 1 1584 26 30 0 0 chrX 131066758 131066791 -35583505 + AT_rich Low_complexity Low_complexity 1 33 0 1 1584 207 279 74 37 chrX 131066826 131066934 -35583362 - MIRb SINE MIR -48 220 109 1 1584 646 293 112 4 chrX 131066934 131067194 -35583102 + B4A SINE B4 1 288 -4 1 1584 233 311 110 11 chrX 131067234 131067325 -35582971 - MIRb SINE MIR -147 121 22 1 1584 1214 48 7 0 chrX 131067325 131067470 -35582826 + B1_Mus1 SINE Alu 3 148 0 1 1584 733 171 16 0 chrX 131067696 131067825 -35582471 + B1_Mur4 SINE Alu 20 150 0 1 1584 336 315 11 0 chrX 131067861 131067950 -35582346 + B1F SINE Alu 20 109 -40 1 1584 1431 71 11 16 chrX 131067973 131068159 -35582137 + B2_Mm2 SINE B2 1 185 -10 1 1584 198 0 0 0 chrX 131068216 131068238 -35582058 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 1584 446 274 107 36 chrX 131068406 131068423 -35581873 - RSINE1 SINE B4 -13 152 136 1 1584 1712 179 77 6 chrX 131068423 131068776 -35581520 - ORR1C1 LTR MaLR 0 378 1 1 1584 446 274 107 36 chrX 131068776 131068898 -35581398 - RSINE1 SINE B4 -30 135 3 1 1584 24 32 0 0 chrX 131069157 131069188 -35581108 + AT_rich Low_complexity Low_complexity 1 31 0 1 1584 932 260 5 0 chrX 131069949 131070153 -35580143 - B3 SINE B2 -9 207 3 1 1584 295 320 47 39 chrX 131070743 131070870 -35579426 + MT2B LTR ERVL 137 264 -337 1 1584 543 156 156 0 chrX 131070775 131070897 -35579399 + B1_Mus2 SINE Alu 7 147 0 1 1584 210 143 0 0 chrX 131071440 131071475 -35578821 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1 1585 23 0 0 0 chrX 131073106 131073129 -35577167 + AT_rich Low_complexity Low_complexity 1 23 0 1 1585 355 235 47 0 chrX 131073319 131073404 -35576892 + PB1D9 SINE Alu 22 110 -10 1 1585 223 271 57 0 chrX 131073607 131073677 -35576619 - PB1D9 SINE Alu -6 114 41 1 1585 1220 35 0 0 chrX 131073803 131073946 -35576350 + B1_Mus2 SINE Alu 2 144 -3 1 1585 189 0 0 0 chrX 131073946 131073967 -35576329 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1 1585 366 317 129 35 chrX 131073981 131074213 -35576083 - Lx8 LINE L1 -9 7464 7211 1 1585 963 73 60 0 chrX 131074222 131074372 -35575924 - B2_Mm2 SINE B2 -10 185 27 1 1585 1226 42 118 24 chrX 131074406 131074576 -35575720 - B2_Mm1a SINE B2 -7 186 1 1 1585 441 171 77 211 chrX 131074586 131074742 -35575554 - B1_Mur4 SINE Alu -7 143 9 1 1585 398 287 0 92 chrX 131074925 131075067 -35575229 + ID_B1 SINE B4 80 208 -16 1 1585 612 81 0 0 chrX 131075067 131075154 -35575142 + (GA)n Simple_repeat Simple_repeat 1 87 0 1 1585 25 0 0 0 chrX 131076214 131076239 -35574057 + GC_rich Low_complexity Low_complexity 1 25 0 1 1585 751 195 196 28 chrX 131077584 131077763 -35572533 - B3 SINE B2 -6 210 2 1 1585 514 183 107 16 chrX 131077925 131078047 -35572249 - B1_Mus2 SINE Alu -1 146 14 1 1585 1019 102 0 0 chrX 131078049 131078186 -35572110 + B1_Mus1 SINE Alu 2 138 -10 1 1585 315 0 0 0 chrX 131078186 131078221 -35572075 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1585 1181 36 0 0 chrX 131078318 131078455 -35571841 + B1_Mus2 SINE Alu 3 139 -8 1 1585 838 208 0 0 chrX 131078789 131078938 -35571358 - B1_Mur2 SINE Alu 0 149 1 1 1585 538 242 0 16 chrX 131078982 131079108 -35571188 - B1F SINE Alu -2 147 24 1 1585 184 346 0 0 chrX 131079281 131079333 -35570963 + MER5B DNA MER1_type 91 142 -36 1 1585 675 224 35 7 chrX 131079336 131079480 -35570816 + B1_Mur2 SINE Alu 2 149 0 1 1585 264 83 0 0 chrX 131079512 131079548 -35570748 + U2 snRNA snRNA 1 36 -152 1 1585 408 283 49 24 chrX 131079556 131079679 -35570617 + ID_B1 SINE B4 89 214 -10 1 1585 296 256 45 90 chrX 131079657 131079790 -35570506 - ID_B1 SINE B4 -97 127 1 1 1585 1252 20 0 7 chrX 131080270 131080418 -35569878 + B1_Mus2 SINE Alu 1 147 0 1 1585 180 0 0 0 chrX 131080418 131080438 -35569858 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1585 205 355 54 0 chrX 131080562 131080655 -35569641 + L2b LINE L2 3277 3374 -1 1 1585 202 341 79 11 chrX 131080667 131080756 -35569540 + MIRm SINE MIR 148 242 -34 2 1585 198 209 0 0 chrX 131080869 131080912 -35569384 + (CGTG)n Simple_repeat Simple_repeat 1 43 0 2 1585 411 286 67 112 chrX 131080940 131081226 -35569070 - B4 SINE B4 -19 273 2 2 1585 314 327 0 9 chrX 131081649 131081760 -35568536 - PB1D7 SINE Alu -10 110 1 2 1585 315 207 50 83 chrX 131081951 131082072 -35568224 + PB1D10 SINE Alu 1 117 0 2 1585 1056 258 46 21 chrX 131082253 131082491 -35567805 - B4A SINE B4 -2 290 44 2 1585 219 36 0 0 chrX 131082491 131082519 -35567777 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2 1585 1056 258 46 21 chrX 131082519 131082561 -35567735 - B4A SINE B4 -249 43 3 2 1585 1162 96 6 11 chrX 131082580 131082598 -35567698 - B2_Mm2 SINE B2 -15 180 163 2 1585 189 0 0 0 chrX 131082598 131082619 -35567677 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2 1585 1162 96 6 11 chrX 131082619 131082780 -35567516 - B2_Mm2 SINE B2 -33 162 2 2 1585 481 266 56 8 chrX 131082790 131082915 -35567381 - B1F SINE Alu -18 131 1 2 1585 581 306 17 50 chrX 131083144 131083385 -35566911 - MER102a DNA MER1_type -18 312 80 2 1585 778 208 13 0 chrX 131083403 131083468 -35566828 + ID SINE ID 16 82 -142 2 1585 436 248 35 26 chrX 131083468 131083584 -35566712 + PB1D10 SINE Alu 1 117 0 2 1585 1227 35 0 0 chrX 131084508 131084649 -35565647 - B1_Mm SINE Alu -6 141 1 2 1585 550 307 47 0 chrX 131085346 131085496 -35564800 + RSINE1 SINE B4 1 157 -8 2 1585 207 196 0 0 chrX 131085999 131086045 -35564251 + A-rich Low_complexity Low_complexity 1 46 0 2 1585 448 159 32 151 chrX 131086067 131086193 -35564103 + PB1D7 SINE Alu 5 115 -5 2 1585 956 75 0 0 chrX 131086216 131086350 -35563946 + B1_Mus1 SINE Alu 15 148 0 2 1585 525 150 75 0 chrX 131087042 131087163 -35563133 + B3A SINE B2 6 150 -66 2 1585 375 0 55 0 chrX 131087166 131087221 -35563075 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 1585 21 0 0 0 chrX 131087247 131087268 -35563028 + AT_rich Low_complexity Low_complexity 1 21 0 2 1585 532 202 65 0 chrX 131087309 131087433 -35562863 + B1F SINE Alu 18 149 0 2 1585 3083 171 71 32 chrX 131087458 131087763 -35562533 + RMER1B Other Other 420 747 -319 2 1585 1471 63 5 40 chrX 131087763 131087962 -35562334 + B2_Mm1a SINE B2 1 192 -1 2 1585 3083 171 71 32 chrX 131087962 131088273 -35562023 + RMER1B Other Other 748 1060 -6 2 1585 645 172 93 43 chrX 131088292 131088432 -35561864 + B1_Mus2 SINE Alu 1 147 0 2 1585 261 246 122 14 chrX 131088455 131088529 -35561767 + ID4 SINE ID 2 83 0 2 1585 187 109 21 21 chrX 131088568 131088590 -35561706 + A-rich Low_complexity Low_complexity 6 26 0 2 1585 1235 54 0 0 chrX 131088590 131088737 -35561559 + B1_Mus2 SINE Alu 1 147 0 2 1585 187 109 21 21 chrX 131088737 131088761 -35561535 + A-rich Low_complexity Low_complexity 27 51 0 2 1585 2401 121 129 99 chrX 131089352 131089877 -35560419 + RLTR20A LTR ERVK 1 541 0 2 1585 279 0 0 0 chrX 131090673 131090704 -35559592 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1585 442 187 0 32 chrX 131090727 131090821 -35559475 + B1_Mur3 SINE Alu 59 149 0 2 1585 283 350 0 17 chrX 131091704 131091823 -35558473 + MER5B DNA MER1_type 15 131 -47 2 1585 321 109 0 0 chrX 131091958 131092004 -35558292 - HAL1-3A_ME LINE L1 -833 2025 1980 2 1585 601 60 0 0 chrX 131092031 131092115 -35558181 + B1_Mus2 SINE Alu 64 147 0 2 1585 305 284 0 0 chrX 131092124 131092191 -35558105 - RSINE1 SINE B4 -97 68 2 2 1585 240 275 0 101 chrX 131092210 131092299 -35557997 + B4A SINE B4 80 159 -133 2 1585 320 250 80 0 chrX 131092220 131092308 -35557988 + PB1D9 SINE Alu 1 95 -25 2 1585 340 307 11 0 chrX 131092295 131092383 -35557913 + ID_B1 SINE B4 82 170 -54 2 1585 704 194 50 14 chrX 131092529 131092670 -35557626 + B1_Mm SINE Alu 1 146 -1 2 1585 873 100 7 41 chrX 131092846 131092992 -35557304 - B1_Mur4 SINE Alu -2 148 8 2 1585 414 145 217 0 chrX 131093006 131093089 -35557207 - B1_Mur4 SINE Alu -9 141 41 2 1585 259 154 19 37 chrX 131093120 131093174 -35557122 - B1_Mus2 SINE Alu -92 55 3 2 1585 276 30 0 0 chrX 131093629 131093662 -35556634 + (TC)n Simple_repeat Simple_repeat 1 33 0 2 1585 315 0 0 0 chrX 131093662 131093696 -35556600 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1585 456 300 7 21 chrX 131094290 131094433 -35555863 - B1F SINE Alu -6 143 3 2 1585 188 131 0 21 chrX 131094842 131094889 -35555407 + T-rich Low_complexity Low_complexity 2 47 0 2 1585 217 176 0 19 chrX 131095671 131095723 -35554573 + PB1D10 SINE Alu 33 83 -34 2 1585 739 282 66 19 chrX 131095744 131095957 -35554339 + ID_B1 SINE B4 1 223 -1 2 1585 206 108 12 86 chrX 131095963 131096044 -35554252 + A-rich Low_complexity Low_complexity 3 77 0 2 1585 301 211 26 66 chrX 131096100 131096176 -35554120 - ID4 SINE ID -7 76 4 2 1585 911 59 44 7 chrX 131096278 131096414 -35553882 + B2_Mm2 SINE B2 48 188 -7 2 1585 363 273 19 71 chrX 131096720 131096874 -35553422 + B1_Mur1 SINE Alu 3 148 -1 2 1585 947 116 0 34 chrX 131096875 131097054 -35553242 + (GAAAA)n Simple_repeat Simple_repeat 3 175 0 2 1585 540 256 7 15 chrX 131097068 131097203 -35553093 + B1F SINE Alu 14 147 -2 2 1585 742 200 7 0 chrX 131097266 131097406 -35552890 + B3 SINE B2 2 142 -74 2 1585 394 268 0 49 chrX 131097403 131097505 -35552791 + RSINE1 SINE B4 48 144 -21 2 1585 291 220 0 44 chrX 131097533 131097647 -35552649 + GA-rich Low_complexity Low_complexity 1 109 0 2 1585 807 164 0 7 chrX 131097759 131097894 -35552402 - B1_Mur1 SINE Alu -7 142 9 2 1585 503 316 52 16 chrX 131098542 131098735 -35551561 + MIR SINE MIR 41 240 -22 2 1585 305 313 0 0 chrX 131098763 131098846 -35551450 + MIRb SINE MIR 171 253 -15 2 1585 287 290 103 43 chrX 131099312 131099496 -35550800 - MIRc SINE MIR -50 218 24 2 1585 431 315 16 8 chrX 131099674 131099802 -35550494 + RSINE1 SINE B4 8 136 -29 2 1585 202 116 47 0 chrX 131100037 131100080 -35550216 + CT-rich Low_complexity Low_complexity 2 46 0 2 1585 528 252 0 0 chrX 131100871 131100982 -35549314 + PB1D10 SINE Alu 1 111 -6 2 1585 3341 43 2 2 chrX 131101680 131102076 -35548220 - MTA_Mm LTR MaLR 0 396 1 2 1585 351 0 0 0 chrX 131102170 131102209 -35548087 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 2 1585 526 286 44 22 chrX 131102300 131102482 -35547814 + MER67B LTR ERV1 282 467 -194 2 1585 250 217 48 124 chrX 131102669 131102774 -35547522 + PB1D10 SINE Alu 5 101 -48 2 1585 323 255 17 73 chrX 131102785 131102963 -35547333 + GA-rich Low_complexity Low_complexity 4 171 0 2 1585 551 289 140 31 chrX 131103034 131103320 -35546976 + LTR31 LTR ERV1 288 604 -15 2 1585 468 194 10 0 chrX 131103554 131103657 -35546639 + ORR1D1 LTR MaLR 1 104 -270 2 1585 257 70 0 44 chrX 131103657 131103702 -35546594 + (TTTC)n Simple_repeat Simple_repeat 3 45 0 2 1585 1118 83 7 0 chrX 131103716 131103861 -35546435 - B1_Mus1 SINE Alu 0 148 3 2 1585 666 222 131 51 chrX 131103863 131104077 -35546219 + ORR1D1 LTR MaLR 89 319 -55 2 1585 456 67 0 0 chrX 131104077 131104137 -35546159 + (TTTTC)n Simple_repeat Simple_repeat 2 61 0 2 1585 1151 68 7 0 chrX 131104138 131104284 -35546012 - B1_Mus2 SINE Alu 0 147 1 2 1585 1094 113 48 11 chrX 131104284 131104472 -35545824 - B2_Mm2 SINE B2 0 195 1 2 1585 283 39 78 0 chrX 131104584 131104635 -35545661 + (CAAAA)n Simple_repeat Simple_repeat 1 55 0 2 1585 606 237 76 65 chrX 131104659 131104844 -35545452 - B3A SINE B2 -4 191 5 2 1585 350 272 12 0 chrX 131105019 131105100 -35545196 + ID4_ SINE ID 2 83 0 2 1585 325 198 81 45 chrX 131105125 131105236 -35545060 + PB1D7 SINE Alu 5 119 -1 2 1585 1122 58 0 0 chrX 131105242 131105379 -35544917 + B1_Mus1 SINE Alu 3 139 -9 2 1585 22 0 0 0 chrX 131105457 131105479 -35544817 + AT_rich Low_complexity Low_complexity 1 22 0 2 1585 652 271 76 16 chrX 131105487 131105671 -35544625 + B3 SINE B2 1 195 -21 2 1585 227 54 54 0 chrX 131105690 131105727 -35544569 + B3A SINE B2 1 39 -159 2 1585 578 174 42 8 chrX 131105728 131105824 -35544472 + B1_Mur4 SINE Alu 1 99 -21 2 1585 414 0 0 0 chrX 131105824 131105870 -35544426 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1585 527 173 48 9 chrX 131105870 131105890 -35544406 + PB1D9 SINE Alu 100 120 0 2 1585 611 230 27 108 chrX 131105895 131106080 -35544216 + B3 SINE B2 28 197 -19 2 1585 488 220 79 10 chrX 131106119 131106220 -35544076 + B3 SINE B2 5 112 -104 2 1585 611 285 0 7 chrX 131106225 131106377 -35543919 + RSINE1 SINE B4 15 165 0 2 1585 698 248 14 0 chrX 131106402 131106547 -35543749 + B1_Mur1 SINE Alu 1 147 -2 2 1585 207 152 0 0 chrX 131106555 131106601 -35543695 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 2 1585 350 115 16 0 chrX 131106788 131106849 -35543447 + (TA)n Simple_repeat Simple_repeat 1 62 0 2 1585 213 39 0 0 chrX 131106945 131106971 -35543325 + (TGGA)n Simple_repeat Simple_repeat 4 29 0 2 1585 303 322 92 54 chrX 131106990 131107055 -35543241 - B4 SINE B4 -18 274 199 2 1585 447 19 0 0 chrX 131107055 131107107 -35543189 + (TC)n Simple_repeat Simple_repeat 2 53 0 2 1585 1232 48 0 0 chrX 131107107 131107254 -35543042 - B1_Mus1 SINE Alu 0 148 2 2 1585 303 322 92 54 chrX 131107254 131107427 -35542869 - B4 SINE B4 -94 198 27 2 1585 337 262 273 16 chrX 131107484 131107612 -35542684 - RSINE1 SINE B4 -3 162 2 2 1585 451 200 133 0 chrX 131107968 131108073 -35542223 - PB1D9 SINE Alu 0 120 2 2 1585 1131 99 37 32 chrX 131108822 131109009 -35541287 - B2_Mm2 SINE B2 -6 189 2 2 1585 894 220 6 6 chrX 131109550 131109733 -35540563 + B3 SINE B2 13 195 -21 2 1585 1573 48 5 0 chrX 131109733 131109920 -35540376 - B2_Mm1t SINE B2 -5 188 1 3 1585 342 241 41 74 chrX 131110102 131110223 -35540073 - B1F SINE Alu -31 118 2 3 1585 261 0 0 0 chrX 131110244 131110273 -35540023 + (CAGA)n Simple_repeat Simple_repeat 1 29 0 3 1585 1515 53 21 0 chrX 131110836 131111026 -35539270 - B2_Mm2 SINE B2 0 195 2 3 1585 819 196 0 0 chrX 131111657 131111825 -35538471 + CT-rich Low_complexity Low_complexity 3 170 0 3 1585 276 267 0 13 chrX 131112940 131113016 -35537280 - ID4 SINE ID -5 78 4 3 1585 594 250 40 13 chrX 131113190 131113340 -35536956 - ID_B1 SINE B4 -15 209 56 3 1585 733 29 58 0 chrX 131113345 131113449 -35536847 + (TTTTC)n Simple_repeat Simple_repeat 3 112 0 3 1585 693 192 23 8 chrX 131113449 131113580 -35536716 - B1_Mur2 SINE Alu -14 135 3 3 1585 216 0 0 0 chrX 131114049 131114073 -35536223 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 3 1585 644 48 219 0 chrX 131114073 131114178 -35536118 - B1_Mus1 SINE Alu -20 128 1 3 1585 256 214 0 145 chrX 131114178 131114205 -35536091 - MT2B LTR ERVL -455 146 139 3 1585 512 130 0 80 chrX 131114227 131114327 -35535969 + PB1D10 SINE Alu 24 115 -2 3 1585 455 255 51 111 chrX 131114366 131114583 -35535713 + B3A SINE B2 1 203 -13 3 1585 543 31 0 0 chrX 131114586 131114651 -35535645 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 1585 207 237 53 0 chrX 131114680 131114756 -35535540 + (CA)n Simple_repeat Simple_repeat 1 80 0 3 1585 273 256 0 2 chrX 131114781 131114852 -35535444 - L1M5 LINE L1 -2280 5602 5533 3 1585 225 0 0 0 chrX 131115362 131115387 -35534909 + (TCC)n Simple_repeat Simple_repeat 3 27 0 3 1585 536 229 0 0 chrX 131115387 131115496 -35534800 - PB1D7 SINE Alu -11 109 1 3 1585 274 311 111 0 chrX 131115875 131115981 -35534315 + PB1D10 SINE Alu 1 117 -32 3 1585 870 62 0 0 chrX 131116695 131116808 -35533488 + (GGAGA)n Simple_repeat Simple_repeat 3 115 0 3 1585 285 205 131 12 chrX 131118336 131118420 -35531876 + PB1 SINE Alu 24 117 -10 3 1585 245 225 23 91 chrX 131118979 131119067 -35531229 + MIR SINE MIR 56 137 -125 3 1585 289 302 121 45 chrX 131119109 131119241 -35531055 + ID_B1 SINE B4 76 217 -7 3 1585 227 272 34 80 chrX 131120767 131120855 -35529441 - PB1D7 SINE Alu -7 113 30 3 1585 936 90 14 7 chrX 131121323 131121468 -35528828 - B1_Mus1 SINE Alu -2 146 1 3 1585 227 167 10 125 chrX 131122713 131122809 -35527487 - Lx3A LINE L1 -2 6979 6895 3 1585 1074 128 89 0 chrX 131122880 131123059 -35527237 - B2_Mm2 SINE B2 0 195 1 3 1585 994 65 28 48 chrX 131123063 131123208 -35527088 - B1_Mus1 SINE Alu -5 143 2 3 1585 216 240 0 20 chrX 131123299 131123350 -35526946 - B1F SINE Alu -90 59 10 3 1585 382 199 108 2 chrX 131123536 131123640 -35526656 - B1_Mm SINE Alu -4 116 3 3 1585 1046 116 0 0 chrX 131123805 131123952 -35526344 + B1_Mus1 SINE Alu 2 148 0 3 1585 266 194 63 89 chrX 131123960 131124039 -35526257 + B3 SINE B2 129 205 -11 3 1585 725 144 106 0 chrX 131124810 131124942 -35525354 + B1_Mus2 SINE Alu 2 147 0 3 1585 1439 150 7 32 chrX 131124942 131125224 -35525072 + RLTR14 LTR ERV1 106 380 -2 3 1585 325 138 0 20 chrX 131125226 131125292 -35525004 + B1_Mur3 SINE Alu 77 139 -8 3 1585 2759 152 160 22 chrX 131125741 131126279 -35524017 + RLTR18 LTR ERVK 1 612 -4 3 1585 248 320 0 13 chrX 131126335 131126411 -35523885 - B1F1 SINE Alu -71 78 4 3 1585 1144 100 53 6 chrX 131127792 131127963 -35522333 + B2_Mm2 SINE B2 1 179 -16 3 1585 1158 62 7 0 chrX 131128374 131128519 -35521777 + B1_Mus1 SINE Alu 3 148 0 3 1585 392 91 330 0 chrX 131128568 131128656 -35521640 + B2_Mm1t SINE B2 63 179 -14 3 1585 216 167 24 0 chrX 131128664 131128706 -35521590 + B4 SINE B4 41 83 -209 3 1585 336 76 358 0 chrX 131128669 131128778 -35521518 + B2_Mm2 SINE B2 47 194 -1 3 1585 563 130 0 29 chrX 131129036 131129139 -35521157 + B1_Mur4 SINE Alu 30 129 -21 3 1585 203 204 0 18 chrX 131129139 131129167 -35521129 + polypurine Low_complexity Low_complexity 1 28 0 3 1585 1072 119 6 6 chrX 131129167 131129345 -35520951 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 3 1585 203 204 0 18 chrX 131129345 131129371 -35520925 + polypurine Low_complexity Low_complexity 29 54 0 3 1585 607 287 0 7 chrX 131129500 131129644 -35520652 + RSINE1 SINE B4 4 146 -19 3 1585 233 288 0 15 chrX 131131288 131131355 -35518941 + B4A SINE B4 80 145 -147 3 1585 269 231 12 37 chrX 131131302 131131383 -35518913 + PB1D10 SINE Alu 9 87 -30 3 1585 825 121 48 41 chrX 131131866 131132013 -35518283 - B1_Mur3 SINE Alu -1 148 1 3 1585 1229 35 0 0 chrX 131132632 131132774 -35517522 + B1_Mus1 SINE Alu 1 142 -6 3 1585 216 0 0 0 chrX 131132776 131132800 -35517496 + (TAA)n Simple_repeat Simple_repeat 2 25 0 3 1585 258 206 220 30 chrX 131132885 131132985 -35517311 + PB1D9 SINE Alu 2 120 0 3 1585 393 193 291 23 chrX 131133245 131133420 -35516876 - ID_B1 SINE B4 -1 223 2 3 1585 228 306 92 0 chrX 131133441 131133539 -35516757 + PB1D10 SINE Alu 3 109 -8 3 1585 262 208 0 0 chrX 131134203 131134251 -35516045 - Charlie24 DNA MER1_type -3 2447 2400 3 1585 321 174 0 8 chrX 131134252 131134319 -35515977 + B1_Mus2 SINE Alu 2 66 -83 3 1585 665 143 0 9 chrX 131134540 131134653 -35515643 - PB1D9 SINE Alu -7 113 2 3 1585 207 0 0 0 chrX 131137071 131137094 -35513202 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 3 1585 22 35 0 0 chrX 131137351 131137380 -35512916 + AT_rich Low_complexity Low_complexity 1 29 0 3 1585 666 176 237 47 chrX 131137744 131137854 -35512442 - Lx9 LINE L1 -22 7622 7478 3 1585 333 0 0 0 chrX 131137854 131137891 -35512405 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1585 666 176 237 47 chrX 131137891 131138037 -35512259 - Lx9 LINE L1 -167 7477 7318 3 1585 578 196 14 48 chrX 131138067 131138212 -35512084 - B1F2 SINE Alu -5 144 5 3 1585 640 194 30 42 chrX 131138226 131138393 -35511903 - B2_Mm2 SINE B2 -6 189 25 3 1585 289 168 25 151 chrX 131139081 131139200 -35511096 - L1ME4a LINE L1 -22 6102 5999 3 1585 21 0 0 0 chrX 131140952 131140973 -35509323 + AT_rich Low_complexity Low_complexity 1 21 0 3 1585 636 261 33 0 chrX 131141719 131141872 -35508424 - ID_B1 SINE B4 -64 160 3 3 1585 411 284 83 128 chrX 131141883 131142149 -35508147 - B4A SINE B4 -10 282 29 3 1585 669 176 57 71 chrX 131142171 131142312 -35507984 - B1_Mur2 SINE Alu -9 140 2 3 1585 756 128 7 21 chrX 131142316 131142460 -35507836 + CT-rich Low_complexity Low_complexity 3 144 0 3 1585 345 145 0 88 chrX 131142470 131142538 -35507758 - PB1D9 SINE Alu -39 81 20 3 1585 587 80 23 0 chrX 131142547 131142635 -35507661 + B3 SINE B2 2 91 -125 3 1585 485 146 67 0 chrX 131142753 131142842 -35507454 - B1_Mur4 SINE Alu -10 140 46 3 1585 1223 118 21 0 chrX 131143068 131143254 -35507042 - B2_Mm2 SINE B2 -4 191 2 3 1585 291 211 59 162 chrX 131144217 131144353 -35505943 + RSINE1 SINE B4 2 123 -42 3 1585 202 304 177 39 chrX 131144707 131144837 -35505459 + MER5A DNA MER1_type 15 162 -27 3 1585 1140 97 54 43 chrX 131145067 131145251 -35505045 + B2_Mm2 SINE B2 1 186 -9 3 1585 818 161 231 6 chrX 131145254 131145423 -35504873 - B3 SINE B2 -6 210 4 3 1585 447 251 185 49 chrX 131145658 131145842 -35504454 - B3 SINE B2 -7 209 1 3 1585 1349 81 11 5 chrX 131146145 131146331 -35503965 - B2_Mm1a SINE B2 -5 188 2 3 1585 930 85 0 0 chrX 131146354 131146483 -35503813 + (TTTC)n Simple_repeat Simple_repeat 4 132 0 3 1585 226 281 94 0 chrX 131146495 131146559 -35503737 - ID4_ SINE ID -12 71 2 3 1585 198 204 0 58 chrX 131146672 131146724 -35503572 - MIRb SINE MIR -103 165 117 3 1585 1023 109 127 0 chrX 131148029 131148194 -35502102 - B2_Mm2 SINE B2 -8 187 2 3 1585 369 0 0 0 chrX 131148309 131148350 -35501946 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 3 1585 349 252 93 9 chrX 131148533 131148641 -35501655 + MER31B LTR ERV1 243 359 -107 3 1585 774 199 60 101 chrX 131148704 131148748 -35501548 + B3 SINE B2 1 35 -181 3 1585 1110 45 0 29 chrX 131148748 131148887 -35501409 + B1_Mus1 SINE Alu 5 139 -9 3 1585 546 29 0 0 chrX 131148887 131148955 -35501341 + (CAAAC)n Simple_repeat Simple_repeat 2 69 0 3 1585 774 199 60 101 chrX 131148955 131149127 -35501169 + B3 SINE B2 36 208 -8 3 1585 414 258 0 40 chrX 131149279 131149380 -35500916 - B4A SINE B4 -188 104 8 3 1585 609 217 8 8 chrX 131149517 131149638 -35500658 + B1_Mur1 SINE Alu 1 121 -28 3 1585 389 271 54 101 chrX 131149672 131149840 -35500456 - B3A SINE B2 0 198 39 3 1585 216 0 0 0 chrX 131149841 131149865 -35500431 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 1585 518 137 11 0 chrX 131149867 131149962 -35500334 + (GA)n Simple_repeat Simple_repeat 2 97 0 3 1585 583 229 0 16 chrX 131149967 131150091 -35500205 - B1_Mur1 SINE Alu -18 131 10 3 1585 261 278 40 40 chrX 131150114 131150215 -35500081 - MIRm SINE MIR -18 258 158 3 1585 801 281 20 10 chrX 131150330 131150531 -35499765 + B3 SINE B2 8 210 -6 3 1585 1412 75 26 26 chrX 131150601 131150793 -35499503 + B2_Mm2 SINE B2 3 194 -1 3 1585 216 97 0 0 chrX 131150793 131150824 -35499472 + (GAAA)n Simple_repeat Simple_repeat 1 31 0 3 1585 639 264 0 7 chrX 131151136 131151285 -35499011 - B1_Mur1 SINE Alu -1 148 1 3 1585 360 286 35 9 chrX 131151292 131151405 -35498891 - B4A SINE B4 -175 117 2 4 1585 3319 205 74 47 chrX 131151681 131152450 -35497846 - Lx7 LINE L1 0 7696 6907 4 1585 1090 203 322 11 chrX 131152448 131152724 -35497572 + Lx7 LINE L1 6270 6631 -1065 4 1585 916 115 15 0 chrX 131152724 131152854 -35497442 + Lx7 LINE L1 6788 6919 -777 4 1585 279 253 12 25 chrX 131152876 131152957 -35497339 - ID_B1 SINE B4 -12 212 133 4 1585 528 128 0 24 chrX 131152972 131153074 -35497222 - B1_Mur4 SINE Alu 0 150 51 4 1585 1114 68 0 39 chrX 131153104 131153257 -35497039 - B1_Mus2 SINE Alu 0 147 1 4 1585 256 330 44 18 chrX 131153300 131153414 -35496882 + MER21B LTR ERV1 26 142 -721 4 1585 1368 105 16 0 chrX 131153427 131153618 -35496678 - B2_Mm2 SINE B2 -1 194 1 4 1585 540 134 0 0 chrX 131153619 131153716 -35496580 + (TC)n Simple_repeat Simple_repeat 2 98 0 4 1585 506 246 97 0 chrX 131153725 131153859 -35496437 - B1F SINE Alu 0 149 3 4 1585 225 0 0 0 chrX 131154033 131154058 -35496238 + (TTA)n Simple_repeat Simple_repeat 2 26 0 4 1585 361 298 11 0 chrX 131154059 131154153 -35496143 - ID_B1 SINE B4 -16 208 114 4 1585 327 352 56 0 chrX 131154641 131154854 -35495442 - MIR SINE MIR -26 236 12 4 1585 361 261 176 0 chrX 131155471 131155590 -35494706 - B1_Mus2 SINE Alu -1 146 7 4 1585 551 82 24 0 chrX 131155597 131155682 -35494614 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 4 1585 740 243 0 0 chrX 131155682 131155822 -35494474 - B1_Mur2 SINE Alu -9 140 1 4 1585 333 140 0 0 chrX 131155844 131155901 -35494395 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 4 1585 344 346 46 0 chrX 131155905 131156035 -35494261 - RSINE1 SINE B4 -28 137 2 4 1585 470 284 45 0 chrX 131156052 131156186 -35494110 - B1F1 SINE Alu -9 140 1 4 1585 334 236 6 3 chrX 131156284 131156368 -35493928 - B1_Mur4 SINE Alu -16 104 20 4 1585 467 161 136 0 chrX 131156470 131156588 -35493708 + Lx LINE L1 6521 6654 0 4 1585 1185 75 0 0 chrX 131156589 131156735 -35493561 + B1_Mus1 SINE Alu 1 146 -2 4 1585 333 0 0 0 chrX 131156794 131156831 -35493465 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 4 1585 251 328 39 16 chrX 131156936 131157063 -35493233 - MIRb SINE MIR -40 228 99 4 1585 2045 156 17 6 chrX 131157331 131157693 -35492603 - MTC LTR MaLR -4 417 52 4 1585 511 209 0 42 chrX 131157683 131157803 -35492493 - B1_Mur2 SINE Alu -2 147 33 4 1585 386 255 0 54 chrX 131157747 131157859 -35492437 - MTC LTR MaLR -315 106 1 4 1585 966 127 0 0 chrX 131158578 131158728 -35491568 - B2_Mm2 SINE B2 -23 172 23 4 1585 772 133 0 0 chrX 131159035 131159148 -35491148 + B3 SINE B2 1 113 -103 4 1585 638 109 0 10 chrX 131159336 131159438 -35490858 + (TTTC)n Simple_repeat Simple_repeat 2 102 0 4 1585 1141 50 0 21 chrX 131160698 131160841 -35489455 - B1_Mus1 SINE Alu -6 142 3 4 1585 536 266 19 83 chrX 131161381 131161537 -35488759 + ID_B1 SINE B4 79 224 0 4 1585 676 185 14 29 chrX 131161568 131161707 -35488589 + B1_Mus2 SINE Alu 10 146 -1 4 1585 279 203 0 0 chrX 131161714 131161783 -35488513 + GA-rich Low_complexity Low_complexity 3 71 0 4 1585 260 270 0 0 chrX 131161802 131161865 -35488431 + ID_B1 SINE B4 99 161 -63 4 1585 2256 246 4 34 chrX 131161977 131162494 -35487802 + Lx6 LINE L1 6950 7452 -8 4 1585 1101 95 0 7 chrX 131162494 131162643 -35487653 + B1_Mus1 SINE Alu 1 148 0 4 1585 207 88 0 0 chrX 131162643 131162677 -35487619 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 4 1585 221 289 144 0 chrX 131162709 131162799 -35487497 - MIRc SINE MIR -129 139 37 4 1585 320 276 98 45 chrX 131163108 131163241 -35487055 + B1_Mur4 SINE Alu 11 150 0 4 1585 506 250 53 8 chrX 131163235 131163368 -35486928 + ID_B1 SINE B4 78 216 -8 4 1585 354 231 38 13 chrX 131163409 131163488 -35486808 + ID4_ SINE ID 3 83 0 4 1585 412 275 126 22 chrX 131163499 131163681 -35486615 - L1ME3 LINE L1 -14 6148 5948 4 1585 1189 61 0 0 chrX 131163688 131163836 -35486460 + B1_Mus1 SINE Alu 1 148 0 4 1585 21 0 0 0 chrX 131163951 131163972 -35486324 + AT_rich Low_complexity Low_complexity 1 21 0 4 1585 684 82 0 0 chrX 131163997 131164094 -35486202 - B2_Mm2 SINE B2 -98 97 1 4 1585 372 268 88 16 chrX 131164117 131164242 -35486054 - B1F SINE Alu -1 148 15 4 1585 342 338 43 37 chrX 131164253 131164416 -35485880 + Lx8 LINE L1 7143 7306 -167 4 1585 238 244 57 23 chrX 131164515 131164603 -35485693 - L1ME3 LINE L1 -286 5893 5803 4 1585 351 0 0 0 chrX 131164628 131164667 -35485629 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 1585 351 0 0 0 chrX 131164667 131164705 -35485591 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1585 1226 54 0 0 chrX 131164706 131164853 -35485443 - B1_Mus2 SINE Alu 0 147 1 4 1585 316 321 43 74 chrX 131164868 131165102 -35485194 - MTEb LTR MaLR -2 377 142 4 1585 1107 90 7 0 chrX 131165253 131165398 -35484898 + B1_Mus2 SINE Alu 2 147 0 4 1585 531 0 0 0 chrX 131165399 131165458 -35484838 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 1585 289 333 0 0 chrX 131165647 131165722 -35484574 - ID4_ SINE ID -7 76 2 4 1585 235 226 32 16 chrX 131165838 131165901 -35484395 + ID_B1 SINE B4 156 219 -5 4 1585 241 208 21 0 chrX 131165855 131165903 -35484393 + B1F SINE Alu 97 145 -4 4 1585 3099 30 0 24 chrX 131165905 131166283 -35484013 + L1Md_F2 LINE L1 6200 6568 -14 4 1585 237 338 62 91 chrX 131166349 131166525 -35483771 + MER5A DNA MER1_type 1 171 -18 4 1585 1538 174 195 11 chrX 131166737 131167091 -35483205 + MTD LTR MaLR 1 419 0 4 1585 279 79 0 0 chrX 131167235 131167273 -35483023 + B2_Mm2 SINE B2 2 39 -156 4 1585 258 291 48 48 chrX 131167599 131167682 -35482614 - LTR88c LTR Genie? -719 143 61 4 1585 601 82 0 0 chrX 131167995 131168080 -35482216 + B1_Mus1 SINE Alu 29 113 -35 4 1585 275 262 12 24 chrX 131168013 131168095 -35482201 + RLTR25A LTR ERVK 522 602 -501 4 1585 864 236 0 0 chrX 131168089 131168263 -35482033 - B3 SINE B2 -8 208 35 4 1585 797 266 59 0 chrX 131168309 131168512 -35481784 - B3 SINE B2 -1 215 1 4 1585 475 248 10 0 chrX 131168588 131168689 -35481607 - ID_B1 SINE B4 -112 112 11 4 1585 302 255 122 0 chrX 131168710 131168808 -35481488 - PB1D10 SINE Alu -7 110 1 4 1585 293 216 114 0 chrX 131168732 131168820 -35481476 - ID_B1 SINE B4 -58 166 69 4 1585 642 204 34 77 chrX 131169152 131169359 -35480937 - Lx2B LINE L1 0 7000 6803 4 1585 1196 55 0 0 chrX 131169486 131169632 -35480664 + B1_Mus1 SINE Alu 2 147 -1 4 1585 225 0 0 0 chrX 131169716 131169741 -35480555 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1585 492 255 114 12 chrX 131169774 131169941 -35480355 + ORR1D1 LTR MaLR 1 184 -190 4 1585 203 0 0 111 chrX 131170117 131170153 -35480143 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 1585 374 234 164 31 chrX 131170177 131170305 -35479991 + B1F SINE Alu 3 147 -2 4 1585 483 279 39 0 chrX 131170331 131170460 -35479836 + ID_B1 SINE B4 87 220 -4 4 1585 262 282 0 0 chrX 131170980 131171051 -35479245 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 4 1585 693 293 87 55 chrX 131171056 131171630 -35478666 - L1MC4a LINE L1 -146 5978 5374 4 1585 889 217 5 60 chrX 131171677 131171778 -35478518 - B3 SINE B2 -11 205 116 4 1585 2180 157 157 25 chrX 131171778 131172249 -35478047 - RMER16 LTR ERVK 0 533 1 4 1585 889 217 5 60 chrX 131172249 131172363 -35477933 - B3 SINE B2 -101 115 2 4 1585 1420 60 22 0 chrX 131172402 131172584 -35477712 + B2_Mm2 SINE B2 1 186 -9 4 1585 2244 45 0 4 chrX 131172649 131172919 -35477377 - L1_Mus1 LINE L1 -138 6429 6161 4 1585 3691 47 0 0 chrX 131172916 131173359 -35476937 + L1_Mus1 LINE L1 5639 6081 -486 4 1585 272 232 387 24 chrX 131173400 131173511 -35476785 + ID_B1 SINE B4 7 157 -67 4 1585 342 373 80 0 chrX 131173569 131173719 -35476577 + Lx8 LINE L1 7170 7331 -142 4 1585 226 273 52 22 chrX 131173720 131173855 -35476441 + Lx9 LINE L1 7478 7616 -28 4 1585 360 0 0 0 chrX 131173883 131173923 -35476373 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1585 226 340 53 46 chrX 131173948 131174099 -35476197 - L1MC4 LINE L1 -1064 6978 6827 4 1585 197 305 94 50 chrX 131174150 131174309 -35475987 + L2a LINE L2 3230 3395 -31 4 1585 353 267 82 51 chrX 131175402 131175560 -35474736 - RSINE1 SINE B4 -1 164 2 4 1585 638 320 87 30 chrX 131175848 131176215 -35474081 - LTR31 LTR ERV1 -16 603 216 4 1585 432 283 133 0 chrX 131176276 131176396 -35473900 - RSINE1 SINE B4 -27 138 3 4 1585 1745 90 31 15 chrX 131176471 131176730 -35473566 - Lx LINE L1 0 6654 6392 4 1585 825 237 19 24 chrX 131176801 131177013 -35473283 - B3 SINE B2 -5 211 1 4 1585 208 313 86 43 chrX 131177208 131177348 -35472948 - MER5A DNA MER1_type -8 181 36 4 1585 692 253 131 5 chrX 131177351 131177542 -35472754 + B3 SINE B2 2 216 0 4 1585 1835 165 30 49 chrX 131177602 131177972 -35472324 + ORR1C1 LTR MaLR 2 364 -14 4 1585 369 0 0 0 chrX 131178027 131178068 -35472228 + (CAA)n Simple_repeat Simple_repeat 2 42 0 4 1585 3232 291 80 19 chrX 131178210 131179274 -35471022 + Lx8 LINE L1 6192 7320 -153 4 1585 285 156 13 25 chrX 131179291 131179370 -35470926 + (TA)n Simple_repeat Simple_repeat 1 78 0 4 1585 315 65 0 0 chrX 131179357 131179403 -35470893 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 1585 255 198 126 42 chrX 131179403 131179498 -35470798 + Lx8 LINE L1 7356 7458 -15 4 1585 228 250 0 0 chrX 131179599 131179643 -35470653 - L1MC4 LINE L1 -2284 5598 5555 4 1585 2380 113 41 23 chrX 131179676 131180064 -35470232 - Lx4A LINE L1 -8 7050 6656 5 1585 248 188 0 0 chrX 131180065 131180113 -35470183 - B1F1 SINE Alu -7 142 95 5 1585 1184 48 7 0 chrX 131180360 131180505 -35469791 - B1_Mus1 SINE Alu -1 147 2 5 1585 35 88 0 0 chrX 131180658 131180749 -35469547 + AT_rich Low_complexity Low_complexity 1 91 0 5 1585 380 248 229 0 chrX 131180750 131180855 -35469441 + ID_B1 SINE B4 80 208 -16 5 1585 22 0 0 0 chrX 131180860 131180882 -35469414 + AT_rich Low_complexity Low_complexity 1 22 0 5 1585 451 324 14 7 chrX 131181030 131181170 -35469126 + ID_B1 SINE B4 82 222 -2 5 1585 1519 53 0 16 chrX 131181204 131181394 -35468902 - B2_Mm2 SINE B2 -7 188 2 5 1585 1078 216 39 4 chrX 131181862 131182095 -35468201 - RLTR18B LTR ERVK -271 241 1 5 1585 293 241 34 57 chrX 131182095 131182183 -35468113 + RSINE1 SINE B4 73 158 -7 5 1585 1248 27 7 0 chrX 131182246 131182392 -35467904 + B1_Mm SINE Alu 1 147 0 5 1585 206 260 20 0 chrX 131182860 131182910 -35467386 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1585 450 0 0 0 chrX 131183267 131183317 -35466979 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1585 543 101 0 0 chrX 131184007 131184086 -35466210 + (GGAA)n Simple_repeat Simple_repeat 4 82 0 5 1585 1188 127 22 0 chrX 131184545 131184726 -35465570 + B2_Mm2 SINE B2 2 186 -9 5 1585 1058 89 0 0 chrX 131184726 131184860 -35465436 + B1_Mus1 SINE Alu 1 135 -13 5 1585 227 21 20 78 chrX 131184860 131184911 -35465385 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 5 1585 345 167 125 22 chrX 131185321 131185427 -35464869 + B1_Mur4 SINE Alu 31 144 -6 5 1585 482 292 47 26 chrX 131185497 131185687 -35464609 + B3A SINE B2 5 198 0 5 1585 269 259 0 12 chrX 131185725 131185811 -35464485 + L1_Rod LINE L1 5720 5804 -43 5 1585 556 177 0 0 chrX 131185833 131185929 -35464367 + B1_Mur3 SINE Alu 43 138 -11 5 1585 207 0 0 0 chrX 131185929 131185952 -35464344 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1585 446 0 19 0 chrX 131185971 131186025 -35464271 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1585 2105 199 39 31 chrX 131186278 131186766 -35463530 + RLTR19 LTR ERVK 1 492 -7 5 1585 679 217 35 0 chrX 131186961 131187104 -35463192 - B1_Mur2 SINE Alu -1 148 1 5 1585 14607 57 24 3 chrX 131187532 131190053 -35460243 - L1Md_F2 LINE L1 0 6582 4005 5 1585 1129 65 0 0 chrX 131190441 131190579 -35459717 - B1_Mus2 SINE Alu -9 138 1 5 1585 1155 71 0 0 chrX 131191122 131191262 -35459034 - B1_Mus2 SINE Alu -6 141 2 5 1585 989 47 109 0 chrX 131191301 131191429 -35458867 + B1_Mus2 SINE Alu 1 142 -5 5 1585 898 301 47 18 chrX 131191865 131192207 -35458089 - L1ME3A LINE L1 -40 6133 5782 5 1585 395 329 60 9 chrX 131192204 131192535 -35457761 + L1ME1 LINE L1 2533 2880 -3266 5 1585 720 249 65 0 chrX 131192542 131192727 -35457569 - B3 SINE B2 -5 211 15 5 1585 327 250 15 38 chrX 131192729 131192862 -35457434 + L1ME1 LINE L1 2865 2994 -3152 5 1585 978 277 136 36 chrX 131192846 131193463 -35456833 + L1ME1 LINE L1 4601 5279 -867 5 1585 617 284 37 5 chrX 131193464 131193680 -35456616 + ID_B1 SINE B4 1 223 -1 5 1585 651 152 0 0 chrX 131193680 131193792 -35456504 + GA-rich Low_complexity Low_complexity 1 112 0 5 1585 727 262 145 26 chrX 131193803 131194261 -35456035 + L1ME1 LINE L1 5593 6104 -75 5 1585 957 18 0 0 chrX 131194353 131194464 -35455832 + (TTTC)n Simple_repeat Simple_repeat 2 112 0 5 1585 957 24 0 30 chrX 131194464 131194595 -35455701 - B1_Mus2 SINE Alu -10 137 11 5 1585 375 121 0 0 chrX 131194679 131194737 -35455559 + (TGAA)n Simple_repeat Simple_repeat 3 60 0 5 1585 1447 281 50 73 chrX 131195160 131195628 -35454668 + RMER1B Other Other 3 471 -595 5 1585 432 0 0 0 chrX 131195628 131195676 -35454620 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1585 1447 258 44 20 chrX 131195676 131195908 -35454388 + RMER1B Other Other 472 588 -478 5 1585 4108 182 58 126 chrX 131195908 131197008 -35453288 + RMER1A Other Other 1 1026 -4 5 1585 1121 82 0 7 chrX 131197121 131197268 -35453028 + B1_Mus1 SINE Alu 1 146 -2 5 1585 468 268 110 0 chrX 131197297 131197424 -35452872 + B3 SINE B2 8 148 -68 5 1585 24 32 0 0 chrX 131197428 131197459 -35452837 + AT_rich Low_complexity Low_complexity 1 31 0 5 1585 1009 259 74 97 chrX 131197503 131198041 -35452255 + MT2A LTR ERVL 1 526 -7 5 1585 694 226 0 0 chrX 131198413 131198550 -35451746 - B1_Mm SINE Alu -5 142 6 5 1585 396 186 129 26 chrX 131198584 131198700 -35451596 + L1_Rod LINE L1 4711 4838 -1009 5 1585 590 229 43 7 chrX 131198698 131198839 -35451457 + L1_Rod LINE L1 5297 5442 -405 5 1585 241 248 0 8 chrX 131198853 131198868 -35451428 + ORR1B1-int LTR MaLR 634 647 -862 5 1585 855 52 0 0 chrX 131198868 131198984 -35451312 + B1_Mus1 SINE Alu 2 117 -31 5 1585 753 73 0 27 chrX 131198984 131199096 -35451200 + B1_Mus1 SINE Alu 40 148 0 5 1585 782 127 22 36 chrX 131199099 131199238 -35451058 + L1_Rod LINE L1 5455 5591 -256 5 1585 312 176 40 13 chrX 131199259 131199334 -35450962 - MER2 DNA MER2_type -142 203 127 5 1585 453 66 0 0 chrX 131199569 131199630 -35450666 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1585 1221 114 0 20 chrX 131199694 131199920 -35450376 - L1Md_F2 LINE L1 0 6582 6388 5 1585 450 0 0 0 chrX 131200044 131200094 -35450202 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1585 27 29 0 0 chrX 131200680 131200714 -35449582 + AT_rich Low_complexity Low_complexity 1 34 0 5 1585 412 295 66 20 chrX 131200714 131200866 -35449430 - RSINE1 SINE B4 -3 162 4 5 1585 2341 97 53 72 chrX 131200994 131201426 -35448870 + RLTR23 LTR ERV1 1 424 -6 5 1585 259 250 93 28 chrX 131201961 131202068 -35448228 + MMERGLN-int LTR ERV1 649 762 -6794 5 1585 462 313 94 56 chrX 131202522 131202851 -35447445 + MMERGLN-int LTR ERV1 1255 1842 -5936 5 198 1298 315 86 79 chrX 131202899 131203404 -35446892 + MMERGLN-int LTR ERV1 2987 3509 -4047 5 1586 3182 53 2 32 chrX 131203404 131203677 -35446619 - MTB LTR MaLR 0 396 134 5 1586 1741 16 0 0 chrX 131203677 131203869 -35446427 - B2_Mm1a SINE B2 0 193 2 5 1586 3182 53 2 32 chrX 131203869 131204003 -35446293 - MTB LTR MaLR -263 133 1 5 1586 8490 67 6 2 chrX 131204003 131205097 -35445199 - MTB-int LTR MaLR 0 1098 1 5 1586 3262 58 5 0 chrX 131205097 131205493 -35444803 - MTB LTR MaLR 0 400 3 5 1586 1298 315 86 79 chrX 131205493 131206178 -35444118 + MMERGLN-int LTR ERV1 3510 4185 -3371 5 1586 816 81 374 26 chrX 131206179 131206444 -35443852 - RLTR20A1 LTR ERVK -194 357 1 5 1586 385 306 6 43 chrX 131206721 131206885 -35443411 + RLTR14-int LTR ERV1 3721 3878 -1439 5 1586 4306 65 21 16 chrX 131206893 131207454 -35442842 + LTRIS2 LTR ERV1 1 564 0 5 1586 4070 63 64 8 chrX 131207998 131208528 -35441768 - LTRIS2 LTR ERV1 0 564 5 5 1586 2715 131 2 69 chrX 131208677 131209138 -35441158 + RLTR23 LTR ERV1 1 430 0 5 1586 22 0 0 0 chrX 131209295 131209317 -35440979 + AT_rich Low_complexity Low_complexity 1 22 0 5 1586 353 299 37 0 chrX 131209419 131209526 -35440770 - ID_B1 SINE B4 -26 198 88 5 1586 425 312 70 65 chrX 131209931 131210287 -35440009 + HAL1b LINE L1 394 751 -1258 5 1586 260 310 29 20 chrX 131210339 131210441 -35439855 - MER2 DNA MER2_type -33 312 210 5 1586 448 325 0 101 chrX 131210613 131210791 -35439505 - RSINE1 SINE B4 0 165 6 5 1586 242 203 0 0 chrX 131210799 131210858 -35439438 - L1MC4 LINE L1 -988 7054 6996 5 1586 266 239 171 0 chrX 131210875 131210992 -35439304 - MER2 DNA MER2_type -122 223 87 5 1586 589 240 101 48 chrX 131211002 131211044 -35439252 - B3A SINE B2 0 198 160 5 1586 234 0 0 0 chrX 131211044 131211070 -35439226 + (GA)n Simple_repeat Simple_repeat 1 26 0 5 1586 589 240 101 48 chrX 131211070 131211215 -35439081 - B3A SINE B2 -39 159 2 5 1586 613 72 0 0 chrX 131211224 131211307 -35438989 - BC1_Mm scRNA scRNA -69 83 1 5 1586 288 293 0 0 chrX 131211316 131211391 -35438905 - MER2 DNA MER2_type -269 76 2 5 1586 745 174 0 36 chrX 131211445 131211592 -35438704 + B1_Mur1 SINE Alu 9 142 -7 5 1586 22 56 0 0 chrX 131211750 131211786 -35438510 + AT_rich Low_complexity Low_complexity 1 36 0 5 1586 1013 234 20 33 chrX 131212079 131212394 -35437902 - L1M2 LINE L1 -863 5280 4990 5 1586 22 0 0 0 chrX 131212397 131212419 -35437877 + AT_rich Low_complexity Low_complexity 1 22 0 5 1586 606 281 42 21 chrX 131212434 131212674 -35437622 - L1M2 LINE L1 -1235 4908 4664 5 1586 1359 196 170 98 chrX 131212674 131213105 -35437191 + MT2A LTR ERVL 1 567 -34 5 1586 1183 0 7 14 chrX 131213105 131213249 -35437047 + (TCTA)n Simple_repeat Simple_repeat 4 146 0 5 1586 900 250 103 58 chrX 131213249 131213279 -35437017 + MT2A LTR ERVL 568 597 -4 5 1586 1599 179 69 6 chrX 131213335 131213667 -35436629 + MT2A LTR ERVL 1 353 -180 5 1586 792 207 114 32 chrX 131213672 131213786 -35436510 + ORR1D1 LTR MaLR 38 175 -199 5 1586 1320 59 0 0 chrX 131213786 131213956 -35436340 + (TCTCCC)n Simple_repeat Simple_repeat 6 175 0 5 1586 792 207 114 32 chrX 131213956 131214061 -35436235 + ORR1D1 LTR MaLR 176 274 -100 5 1586 367 157 20 58 chrX 131214043 131214152 -35436144 - ORR1C2 LTR MaLR -22 352 249 5 1586 1197 55 0 0 chrX 131214187 131214333 -35435963 + B1_Mus2 SINE Alu 2 147 0 5 1586 1052 216 9 27 chrX 131214426 131214645 -35435651 - B3 SINE B2 0 216 2 5 1586 357 62 0 0 chrX 131214648 131214696 -35435600 + (TATG)n Simple_repeat Simple_repeat 4 51 0 5 1586 1712 186 37 29 chrX 131214707 131215083 -35435213 + RLTR11A2 LTR ERVK 50 428 -99 5 1586 940 125 0 46 chrX 131215146 131215197 -35435099 - B1_Mur4 SINE Alu -6 144 98 5 1586 3421 38 2 0 chrX 131215197 131215591 -35434705 - MTA_Mm LTR MaLR 0 396 2 5 1586 940 125 0 46 chrX 131215591 131215690 -35434606 - B1_Mur4 SINE Alu -53 97 1 5 1586 345 47 0 0 chrX 131215714 131215757 -35434539 + (TATG)n Simple_repeat Simple_repeat 4 46 0 5 1586 761 174 207 6 chrX 131216484 131216663 -35433633 + B3 SINE B2 2 216 0 5 1586 755 249 118 10 chrX 131216773 131216968 -35433328 + B3 SINE B2 1 216 0 5 1586 1451 277 52 46 chrX 131217001 131217613 -35432683 + L1MA6 LINE L1 5592 6207 -93 5 1586 421 193 11 33 chrX 131217631 131217722 -35432574 + PB1D9 SINE Alu 32 120 0 5 1586 469 233 34 8 chrX 131218148 131218265 -35432031 + PB1D7 SINE Alu 1 120 0 5 1586 1188 75 0 0 chrX 131218414 131218561 -35431735 - B1_Mus2 SINE Alu 0 147 1 5 1586 23 0 0 0 chrX 131218598 131218621 -35431675 + AT_rich Low_complexity Low_complexity 1 23 0 5 1586 823 173 201 27 chrX 131218624 131218808 -35431488 - B3 SINE B2 0 216 1 5 1586 602 216 96 57 chrX 131218815 131218992 -35431304 - B3A SINE B2 -10 188 5 5 1586 334 286 142 47 chrX 131219137 131219412 -35430884 - L1M5 LINE L1 -528 5596 5296 5 1586 288 0 0 0 chrX 131220115 131220147 -35430149 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 6 1586 22 35 0 0 chrX 131221180 131221209 -35429087 + GC_rich Low_complexity Low_complexity 1 29 0 6 1586 236 203 0 26 chrX 131221833 131221909 -35428387 + (TATATG)n Simple_repeat Simple_repeat 5 78 0 6 1586 244 289 7 7 chrX 131228930 131229083 -35421213 + (CTGGGG)n Simple_repeat Simple_repeat 4 156 0 6 1586 213 180 0 0 chrX 131229141 131229191 -35421105 + (CTGGGG)n Simple_repeat Simple_repeat 4 53 0 6 1586 216 416 0 0 chrX 131229280 131229357 -35420939 + G-rich Low_complexity Low_complexity 3 79 0 6 1586 237 180 0 0 chrX 131229429 131229479 -35420817 + (CTGGGG)n Simple_repeat Simple_repeat 4 53 0 6 1586 225 180 0 0 chrX 131229549 131229599 -35420697 + (CTGGGG)n Simple_repeat Simple_repeat 4 53 0 6 1586 916 64 0 0 chrX 131231691 131231816 -35418480 + B1_Mm SINE Alu 23 147 0 6 1586 305 200 0 110 chrX 131232050 131232123 -35418173 - PB1D10 SINE Alu -22 95 31 6 1586 1914 134 41 18 chrX 131232412 131232754 -35417542 + Lx LINE L1 6305 6654 0 6 1586 411 21 0 0 chrX 131232843 131232891 -35417405 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1586 793 201 219 0 chrX 131233153 131233322 -35416974 + B3 SINE B2 1 206 -10 6 1586 780 232 0 18 chrX 131233365 131233532 -35416764 - RSINE1 SINE B4 -1 164 1 6 1586 617 267 11 32 chrX 131233793 131233979 -35416317 + B4A SINE B4 22 203 -89 6 1586 464 240 68 99 chrX 131234018 131234149 -35416147 + B3 SINE B2 2 114 -102 6 1586 3458 58 2 7 chrX 131234149 131234580 -35415716 - L1Md_F2 LINE L1 -12 6570 6142 6 1586 464 240 68 99 chrX 131234580 131234670 -35415626 + B3 SINE B2 115 216 0 6 1586 560 261 0 0 chrX 131234946 131235084 -35415212 - B1_Mur2 SINE Alu 0 149 12 6 1586 497 289 121 0 chrX 131235099 131235248 -35415048 - B3 SINE B2 -11 205 39 6 1586 23 33 0 0 chrX 131235280 131235310 -35414986 + AT_rich Low_complexity Low_complexity 1 30 0 6 1586 551 227 7 83 chrX 131235693 131235837 -35414459 + B1_Mm SINE Alu 1 133 -14 6 1586 702 91 0 0 chrX 131235850 131235949 -35414347 + (CAAAG)n Simple_repeat Simple_repeat 1 99 0 6 1586 540 296 46 26 chrX 131235961 131236155 -35414141 + LTR16A LTR ERVL 1 198 -253 6 1586 315 341 37 0 chrX 131236164 131236299 -35413997 + LTR16A LTR ERVL 310 449 -2 6 1586 778 340 84 53 chrX 131236306 131236508 -35413788 + HERV16-int LTR ERVL 6 204 -4792 6 1586 741 203 152 21 chrX 131236508 131236699 -35413597 + B3 SINE B2 1 216 0 6 1586 778 340 84 53 chrX 131236699 131237357 -35412939 + HERV16-int LTR ERVL 205 892 -4104 6 1586 887 209 134 0 chrX 131237582 131237769 -35412527 + B3 SINE B2 1 212 -4 6 1586 485 318 82 15 chrX 131237985 131238180 -35412116 + HERV16-int LTR ERVL 1390 1597 -3399 6 1586 754 64 18 0 chrX 131238239 131238348 -35411948 + (GAAA)n Simple_repeat Simple_repeat 2 112 0 6 1586 486 0 0 0 chrX 131238419 131238473 -35411823 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 1586 855 156 7 41 chrX 131238476 131238623 -35411673 - B1_Mur4 SINE Alu -7 143 2 6 1586 1566 313 90 20 chrX 131238701 131239438 -35410858 + HERV16-int LTR ERVL 1898 2685 -2311 6 1586 699 289 154 46 chrX 131239472 131239777 -35410519 - Zaphod DNA Tip100 -3597 434 97 6 1586 423 0 0 0 chrX 131239777 131239824 -35410472 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 1586 486 91 0 0 chrX 131239824 131239901 -35410395 + (GA)n Simple_repeat Simple_repeat 2 78 0 6 1586 655 231 8 0 chrX 131239903 131240033 -35410263 - RSINE1 SINE B4 -33 132 2 6 1586 1216 288 79 57 chrX 131240211 131240704 -35409592 - Lx8 LINE L1 -6 7467 6964 6 1586 246 196 0 38 chrX 131240730 131240783 -35409513 + PB1D9 SINE Alu 5 55 -65 6 1586 1074 95 0 0 chrX 131240792 131240971 -35409325 + (GA)n Simple_repeat Simple_repeat 2 180 0 6 1586 395 49 33 0 chrX 131240980 131241041 -35409255 + (CAGAGA)n Simple_repeat Simple_repeat 2 64 0 6 1586 269 217 14 0 chrX 131241050 131241119 -35409177 + MTEa LTR MaLR 310 379 0 6 1586 1094 300 153 8 chrX 131241143 131241634 -35408662 - ERVL-int LTR ERVL -51 5706 5167 6 1586 1567 305 63 29 chrX 131241634 131242560 -35407736 - ERVL-int LTR ERVL -694 5020 4063 6 1586 483 90 0 0 chrX 131242623 131242701 -35407595 + (T)n Simple_repeat Simple_repeat 1 78 0 6 1586 814 80 0 0 chrX 131242701 131242814 -35407482 - B1_Mm SINE Alu 0 147 35 6 1586 2636 298 70 42 chrX 131242946 131244053 -35406243 - Lx8 LINE L1 0 7473 6336 6 1586 303 252 68 39 chrX 131244055 131244158 -35406138 - ERVL-int LTR ERVL -1902 3812 3707 6 1586 278 132 18 36 chrX 131244162 131244217 -35406079 - MTE2b LTR MaLR 0 379 326 6 1586 1123 252 22 95 chrX 131244284 131244643 -35405653 - MTE2b LTR MaLR -46 333 1 6 1586 325 336 23 8 chrX 131244643 131244775 -35405521 - ERVL-int LTR ERVL -2010 3704 3571 6 1586 1341 317 55 58 chrX 131244874 131245496 -35404800 - ERVL-int LTR ERVL -2305 3409 2790 6 1586 675 149 26 9 chrX 131245581 131245696 -35404600 + B1_Mur1 SINE Alu 25 141 -8 6 1586 201 61 38 75 chrX 131245722 131245743 -35404553 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 6 1586 2088 197 44 7 chrX 131245743 131246148 -35404148 + MTC LTR MaLR 2 421 0 6 1586 201 61 38 75 chrX 131246148 131246179 -35404117 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1586 1505 292 20 16 chrX 131246181 131246685 -35403611 - ERVL-int LTR ERVL -2918 2796 2291 6 1586 1155 102 6 0 chrX 131246723 131246900 -35403396 - B2_Mm1t SINE B2 0 193 16 6 1586 418 216 33 187 chrX 131247128 131247310 -35402986 - RSINE1 SINE B4 0 165 12 6 1586 638 260 11 39 chrX 131248084 131248264 -35402032 + B3A SINE B2 8 182 -16 6 1586 21 0 0 0 chrX 131248296 131248317 -35401979 + AT_rich Low_complexity Low_complexity 1 21 0 6 1586 530 276 100 68 chrX 131248405 131248845 -35401451 + L1MC4 LINE L1 2049 2502 -3713 6 1586 1412 70 37 0 chrX 131249103 131249290 -35401006 - B2_Mm2 SINE B2 0 195 2 6 1586 946 117 63 23 chrX 131249303 131249478 -35400818 - B2_Mm1t SINE B2 -11 182 1 6 1586 1173 268 152 69 chrX 131249553 131249938 -35400358 - L1MB1 LINE L1 -228 6084 5648 6 1586 459 0 0 0 chrX 131249938 131249989 -35400307 + (TC)n Simple_repeat Simple_repeat 2 52 0 6 1586 207 0 0 0 chrX 131249989 131250011 -35400285 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1586 1173 274 129 45 chrX 131250011 131250032 -35400264 - L1MB1 LINE L1 -542 5647 5621 6 1586 1003 233 155 40 chrX 131250032 131250407 -35399889 + MTD LTR MaLR 1 418 -1 6 1586 1173 268 152 69 chrX 131250407 131250765 -35399531 - L1MB1 LINE L1 -569 5620 5256 6 1586 252 0 0 0 chrX 131251511 131251539 -35398757 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1586 207 0 0 0 chrX 131251995 131252018 -35398278 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1586 333 0 0 0 chrX 131254275 131254312 -35395984 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1586 228 111 0 0 chrX 131254802 131254838 -35395458 + (GGA)n Simple_repeat Simple_repeat 1 36 0 6 1586 815 194 14 0 chrX 131256558 131256702 -35393594 + B1_Mur4 SINE Alu 4 149 -1 6 1586 1177 61 7 0 chrX 131257742 131257889 -35392407 + B1_Mus1 SINE Alu 1 148 0 6 1586 1052 84 0 7 chrX 131258040 131258184 -35392112 - B1_Mus1 SINE Alu -4 144 2 6 1586 39 38 0 0 chrX 131259007 131259060 -35391236 + AT_rich Low_complexity Low_complexity 1 53 0 6 1586 1131 224 9 0 chrX 131259066 131259280 -35391016 + B3 SINE B2 1 216 0 6 1586 1183 56 7 0 chrX 131259537 131259681 -35390615 + B1_Mus1 SINE Alu 4 148 0 6 1586 474 88 0 0 chrX 131259921 131259989 -35390307 + (TG)n Simple_repeat Simple_repeat 2 69 0 6 1586 266 229 67 67 chrX 131259996 131260071 -35390225 - ID2 SINE ID -7 76 2 6 1586 385 244 24 0 chrX 131261173 131261255 -35389041 - B3 SINE B2 -5 211 128 6 1586 333 0 0 0 chrX 131261336 131261373 -35388923 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 6 1586 502 265 8 8 chrX 131261451 131261569 -35388727 - B1F SINE Alu -9 140 23 6 1586 372 290 88 57 chrX 131261572 131262095 -35388201 - L1M4 LINE L1 -4985 1660 1154 6 1586 421 293 32 114 chrX 131262143 131262520 -35387776 - L1M4 LINE L1 -5524 1121 776 6 1586 383 271 23 69 chrX 131262529 131262660 -35387636 - B1_Mur1 SINE Alu -20 129 5 6 1586 421 310 89 62 chrX 131262660 131263188 -35387108 - L1M4 LINE L1 -5909 736 91 6 1586 953 137 13 20 chrX 131263508 131263657 -35386639 - B1_Mur3 SINE Alu 0 149 2 6 1586 392 288 9 0 chrX 131263905 131264016 -35386280 - L1MCb LINE L1 -5761 284 173 6 1586 318 182 0 0 chrX 131265329 131265395 -35384901 + GA-rich Low_complexity Low_complexity 4 69 0 6 1586 504 252 0 0 chrX 131265896 131266003 -35384293 - B1_Mur4 SINE Alu -43 107 1 6 1586 222 156 0 0 chrX 131266061 131266106 -35384190 + A-rich Low_complexity Low_complexity 5 49 0 6 1586 342 0 0 0 chrX 131267095 131267133 -35383163 + (CTG)n Simple_repeat Simple_repeat 2 39 0 6 1586 207 0 0 0 chrX 131268268 131268291 -35382005 + (CTG)n Simple_repeat Simple_repeat 3 25 0 6 1586 867 173 14 0 chrX 131269828 131269967 -35380329 + B1_Mur3 SINE Alu 2 142 -7 6 1586 434 265 38 61 chrX 131270714 131270927 -35379369 - L1M5 LINE L1 -1868 4278 4071 6 1586 2378 219 104 49 chrX 131272156 131272909 -35377387 + Lx8 LINE L1 6680 7473 0 6 1586 358 291 52 47 chrX 131273213 131273292 -35377004 - MER53 DNA hAT -1 192 108 6 1586 312 27 0 0 chrX 131273292 131273329 -35376967 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1586 358 291 52 47 chrX 131273329 131273440 -35376856 - MER53 DNA hAT -86 107 1 6 1586 441 303 34 22 chrX 131273455 131273634 -35376662 + MLT1H LTR MaLR 369 549 0 6 1586 690 13 0 0 chrX 131274232 131274311 -35375985 + (TTTC)n Simple_repeat Simple_repeat 3 81 0 6 1586 354 308 12 12 chrX 131274886 131275049 -35375247 + L1_Mur3 LINE L1 2240 2406 -3474 6 1586 709 296 0 6 chrX 131275057 131275220 -35375076 + B3A SINE B2 1 162 -36 6 1586 741 276 60 34 chrX 131275653 131275919 -35374377 + B4A SINE B4 2 274 -18 6 1586 398 308 0 30 chrX 131276041 131276175 -35374121 - MER20 DNA MER1_type -89 130 1 6 1586 443 316 51 19 chrX 131277240 131277456 -35372840 + L1M7 LINE L1 589 811 -5407 6 1586 234 0 0 0 chrX 131277639 131277665 -35372631 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 1586 700 222 158 26 chrX 131278056 131278246 -35372050 - B3 SINE B2 0 216 2 6 1586 252 0 0 0 chrX 131280197 131280225 -35370071 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1586 342 0 0 0 chrX 131283183 131283221 -35367075 + (CAG)n Simple_repeat Simple_repeat 2 39 0 6 1586 235 288 88 56 chrX 131285437 131285562 -35364734 + RMER10A LTR ERVL 56 184 -258 6 1586 636 38 0 0 chrX 131288521 131288600 -35361696 + (TTCC)n Simple_repeat Simple_repeat 2 80 0 6 1586 860 216 20 44 chrX 131288769 131288972 -35361324 - B3A SINE B2 0 198 1 6 1586 261 305 21 0 chrX 131289182 131289277 -35361019 - MamRep605 Unknown Unknown -126 750 654 6 1586 708 297 88 35 chrX 131289389 131289706 -35360590 - MamRep605 Unknown Unknown -271 605 272 6 1586 795 101 0 0 chrX 131292011 131292130 -35358166 + (TC)n Simple_repeat Simple_repeat 2 120 0 7 1586 212 147 0 0 chrX 131292568 131292602 -35357694 + (TTC)n Simple_repeat Simple_repeat 3 36 0 7 1586 216 217 115 16 chrX 131293987 131294048 -35356248 - L3 LINE CR1 -4273 216 150 7 1586 241 281 153 60 chrX 131295120 131295336 -35354960 + L1M5 LINE L1 5543 5778 -346 7 1586 192 77 0 0 chrX 131295949 131295975 -35354321 + (TAA)n Simple_repeat Simple_repeat 2 27 0 7 1586 36 0 0 0 chrX 131296653 131296689 -35353607 + AT_rich Low_complexity Low_complexity 1 36 0 7 1586 969 88 0 0 chrX 131296878 131297015 -35353281 + (TCCC)n Simple_repeat Simple_repeat 3 139 0 7 1586 2579 223 198 44 chrX 131298748 131299056 -35351240 - Lx9 LINE L1 -947 6697 6383 7 1586 1723 31 5 0 chrX 131299056 131299247 -35351049 - B2_Mm1t SINE B2 0 193 2 7 1586 6283 206 123 92 chrX 131299247 131301781 -35348515 - Lx9 LINE L1 -1262 6382 3672 7 1586 911 226 134 3 chrX 131301775 131302059 -35348237 - Lx9 LINE L1 -6579 1029 709 7 1586 426 85 0 0 chrX 131302223 131302282 -35348014 + (TC)n Simple_repeat Simple_repeat 1 59 0 7 1586 358 330 41 26 chrX 131302296 131302620 -35347676 - L1_Mm LINE L1 -3478 2402 2077 7 1586 227 252 93 99 chrX 131302807 131302979 -35347317 - L1_Mm LINE L1 -3915 1962 1792 7 1586 558 243 206 11 chrX 131302991 131303159 -35347137 - B3A SINE B2 -23 193 1 7 1586 201 324 27 0 chrX 131303682 131303756 -35346540 + CT-rich Low_complexity Low_complexity 2 77 0 7 1586 214 354 79 9 chrX 131303759 131303772 -35346524 - ID_B1 SINE B4 -19 205 160 7 1586 259 296 48 24 chrX 131303772 131303855 -35346441 - B1F SINE Alu -35 114 30 7 1586 214 354 79 9 chrX 131303855 131303873 -35346423 - ID_B1 SINE B4 -19 159 84 7 1586 976 108 0 86 chrX 131305701 131305863 -35344433 - B1_Mus1 SINE Alu 0 148 1 7 1586 21 36 0 0 chrX 131306144 131306172 -35344124 + AT_rich Low_complexity Low_complexity 1 28 0 7 1586 559 291 78 13 chrX 131306194 131306347 -35343949 - RSINE1 SINE B4 0 165 3 7 1586 1655 207 68 14 chrX 131306420 131306773 -35343523 + ORR1D1 LTR MaLR 3 374 0 7 1586 474 197 213 0 chrX 131306950 131307072 -35343224 - ORR1D1 LTR MaLR -224 150 3 7 1586 513 0 0 0 chrX 131307238 131307295 -35343001 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 7 1586 8479 149 18 29 chrX 131307297 131307365 -35342931 - Lx4B LINE L1 -19 7039 6972 7 1586 1303 47 0 0 chrX 131307365 131307513 -35342783 - B1_Mus1 SINE Alu 0 148 1 7 1586 18380 135 23 11 chrX 131307513 131311568 -35338728 - Lx4B LINE L1 -87 6971 2876 7 1586 414 245 36 9 chrX 131311675 131311786 -35338510 + L1MA5 LINE L1 6182 6295 -5 7 1586 413 294 92 61 chrX 131311937 131312133 -35338163 + MLT1E2 LTR MaLR 209 410 -217 7 1586 293 312 64 0 chrX 131312139 131312264 -35338032 - L1MA5 LINE L1 -42 6258 6126 7 1586 335 267 8 25 chrX 131312262 131312381 -35337915 - Lx6 LINE L1 -27 7433 7317 7 1586 666 236 0 0 chrX 131312382 131312547 -35337749 + GA-rich Low_complexity Low_complexity 4 168 0 7 1586 2883 255 104 13 chrX 131312547 131313533 -35336763 - Lx6 LINE L1 -136 7324 6000 7 1586 4457 183 31 26 chrX 131313529 131313756 -35336540 - L1_Mur3 LINE L1 -2997 2883 2654 7 1586 315 0 0 0 chrX 131313756 131313791 -35336505 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1586 4457 191 104 29 chrX 131313791 131314939 -35335357 - L1_Mur3 LINE L1 -3227 2653 1214 7 1586 207 0 0 0 chrX 131314939 131314962 -35335334 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1586 1797 180 117 28 chrX 131314962 131315303 -35334993 - L1_Mur3 LINE L1 -6515 1213 843 7 1586 1259 296 54 61 chrX 131315288 131315880 -35334416 - L1_Mur3 LINE L1 -7052 676 44 7 1586 252 0 0 0 chrX 131315949 131315977 -35334319 + (TA)n Simple_repeat Simple_repeat 1 28 0 7 1586 533 315 21 51 chrX 131316079 131316313 -35333983 - Lx8 LINE L1 -258 7215 6989 7 1586 2250 277 77 13 chrX 131316806 131317486 -35332810 - Lx8 LINE L1 -555 6918 6196 7 1586 433 309 0 0 chrX 131317629 131317723 -35332573 - PB1D9 SINE Alu -24 96 3 7 1586 53 49 0 0 chrX 131317855 131317936 -35332360 + AT_rich Low_complexity Low_complexity 1 81 0 7 1586 1185 134 43 0 chrX 131317993 131318202 -35332094 - Lx9 LINE L1 -1 7643 7426 7 1586 558 314 12 0 chrX 131318503 131318672 -35331624 + MIR SINE MIR 82 252 -10 7 1586 21 82 0 0 chrX 131319079 131319128 -35331168 + AT_rich Low_complexity Low_complexity 1 49 0 7 1586 2548 101 0 9 chrX 131319260 131319590 -35330706 + ORR1A2 LTR MaLR 1 327 0 7 1586 3252 113 8 31 chrX 131320650 131321134 -35329162 - Lx3C LINE L1 -2 6974 6502 7 1586 5009 117 26 42 chrX 131321135 131322025 -35328271 + Lx3B LINE L1 5384 6250 -723 7 1586 357 24 0 0 chrX 131322025 131322067 -35328229 + (GAAA)n Simple_repeat Simple_repeat 2 43 0 7 1586 5009 126 49 56 chrX 131322067 131322295 -35328001 + Lx3B LINE L1 6251 6479 -494 7 1586 241 338 0 12 chrX 131322446 131322527 -35327769 + ID4_ SINE ID 1 80 -3 7 1586 396 0 0 0 chrX 131322761 131322805 -35327491 + (TC)n Simple_repeat Simple_repeat 1 44 0 7 1586 333 82 0 0 chrX 131322805 131322853 -35327443 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 1586 479 237 17 17 chrX 131322853 131322969 -35327327 - RSINE1 SINE B4 -25 140 25 7 1586 653 319 95 20 chrX 131323591 131324033 -35326263 - L1M5 LINE L1 -400 5794 5320 7 1586 180 152 0 0 chrX 131324283 131324316 -35325980 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1586 23 33 0 0 chrX 131324341 131324371 -35325925 + AT_rich Low_complexity Low_complexity 1 30 0 7 1586 288 0 0 0 chrX 131324425 131324457 -35325839 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 1586 1093 275 10 40 chrX 131324461 131324760 -35325536 - B4 SINE B4 -1 291 2 7 1586 21 36 0 0 chrX 131325412 131325440 -35324856 + AT_rich Low_complexity Low_complexity 1 28 0 7 1586 3778 35 9 0 chrX 131325459 131325891 -35324405 - L1Md_F2 LINE L1 0 6582 6147 7 1586 256 337 105 0 chrX 131326394 131326480 -35323816 - PB1D10 SINE Alu -7 110 16 7 1586 615 256 44 0 chrX 131326480 131326617 -35323679 - B3A SINE B2 -55 143 1 7 1586 296 100 242 32 chrX 131327085 131327147 -35323149 + B4 SINE B4 6 80 -212 7 1586 1648 232 20 53 chrX 131327169 131327565 -35322731 - MTD LTR MaLR -36 383 1 7 1586 269 26 0 26 chrX 131327770 131327809 -35322487 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1586 336 211 56 0 chrX 131328341 131328412 -35321884 - PB1D10 SINE Alu -9 108 34 7 1586 366 288 62 9 chrX 131328452 131328564 -35321732 - PB1D7 SINE Alu -2 118 1 7 1586 1809 241 50 28 chrX 131328733 131329194 -35321102 - Lx5 LINE L1 -2 7048 6578 7 1586 3364 65 10 2 chrX 131329276 131329694 -35320602 - BGLII LTR ERVK 0 421 1 7 1586 269 328 7 29 chrX 131329786 131329924 -35320372 - L1MD2 LINE L1 -17 6342 6208 7 1586 1227 56 7 0 chrX 131329924 131330068 -35320228 + B1_Mus2 SINE Alu 2 146 -1 7 1586 679 253 14 0 chrX 131330268 131330414 -35319882 - B1_Mur2 SINE Alu 0 149 2 7 1586 316 242 35 231 chrX 131330464 131330514 -35319782 + B2_Mm2 SINE B2 2 36 -159 7 1586 4669 136 30 24 chrX 131330514 131331255 -35319041 + Lx3C LINE L1 6232 6976 0 7 1586 778 258 27 27 chrX 131331255 131331442 -35318854 + B3 SINE B2 28 214 -2 7 1586 626 228 22 132 chrX 131331469 131331493 -35318803 - RSINE1 SINE B4 0 165 143 7 1586 240 86 0 0 chrX 131331493 131331528 -35318768 + (TCTG)n Simple_repeat Simple_repeat 4 38 0 7 1586 626 228 22 132 chrX 131331528 131331685 -35318611 - RSINE1 SINE B4 -23 142 4 7 1586 808 61 45 36 chrX 131332223 131332444 -35317852 + (TCTCTG)n Simple_repeat Simple_repeat 1 222 0 7 1586 450 53 0 0 chrX 131332449 131332506 -35317790 + (TCTG)n Simple_repeat Simple_repeat 2 58 0 7 1586 506 272 167 25 chrX 131332536 131332698 -35317598 - B4A SINE B4 -87 205 21 7 1586 501 309 12 29 chrX 131332886 131333059 -35317237 - B3A SINE B2 -1 197 28 7 1587 360 210 137 82 chrX 131334314 131334496 -35315800 - L1MA4 LINE L1 -348 5952 5761 7 1587 687 317 146 46 chrX 131334512 131334583 -35315713 - Charlie1a DNA MER1_type -950 505 433 7 1587 1404 123 51 23 chrX 131334583 131334800 -35315496 - URR1B DNA MER1_type 0 225 3 7 1587 687 317 146 46 chrX 131334800 131335187 -35315109 - Charlie1a DNA MER1_type -1023 432 1 7 1587 5357 97 14 3 chrX 131335306 131336063 -35314233 - Lx2 LINE L1 -573 6424 5659 7 1587 4233 78 25 21 chrX 131336063 131336628 -35313668 + Lx2 LINE L1 6427 6993 -4 7 1587 204 125 0 0 chrX 131336935 131336967 -35313329 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 1587 180 0 0 0 chrX 131337331 131337351 -35312945 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 1587 1224 265 21 0 chrX 131337497 131337780 -35312516 - B4 SINE B4 -2 290 2 7 1587 3754 68 7 0 chrX 131338196 131338653 -35311643 - L1_Mus1 LINE L1 -1 6566 6107 7 1587 218 32 32 0 chrX 131342983 131343014 -35307282 + (GGGGA)n Simple_repeat Simple_repeat 2 33 0 7 1587 1610 83 0 5 chrX 131345414 131345633 -35304663 - Lx3_Mus LINE L1 -394 6615 6398 7 1587 1184 107 69 30 chrX 131345633 131345835 -35304461 + Lx3A LINE L1 6765 6974 -7 7 1587 237 65 0 0 chrX 131346318 131346349 -35303947 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 1587 272 352 0 54 chrX 131346350 131346461 -35303835 - B3A SINE B2 -27 171 67 7 1587 6035 113 55 10 chrX 131346704 131347608 -35302688 - Lx2 LINE L1 -4 6993 6049 7 1587 301 266 16 0 chrX 131348558 131348622 -35301674 + ID2 SINE ID 2 66 -17 7 1587 219 361 147 43 chrX 131348780 131348992 -35301304 + L2a LINE L2 2856 3089 -337 7 1587 501 175 12 0 chrX 131349040 131349120 -35301176 + ID4_ SINE ID 2 82 -1 7 1587 381 251 104 35 chrX 131349241 131349414 -35300882 - L1MA4A LINE L1 -275 6025 5841 7 1587 243 177 177 0 chrX 131349426 131349488 -35300808 - L1M1 LINE L1 -435 5868 5796 7 1587 270 207 197 46 chrX 131349751 131349903 -35300393 - Lx8 LINE L1 -1 7472 7298 7 1587 615 93 64 18 chrX 131349915 131350024 -35300272 + B2_Mm2 SINE B2 82 195 0 7 1587 333 0 0 0 chrX 131350294 131350331 -35299965 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1587 818 335 88 14 chrX 131350527 131350945 -35299351 - LTR16A1 LTR ERVL -4 452 4 7 1587 225 323 0 0 chrX 131354060 131354122 -35296174 + ID_B1 SINE B4 79 140 -84 7 1587 217 336 45 27 chrX 131354068 131354178 -35296118 + B1F1 SINE Alu 6 117 0 7 1587 1250 122 16 32 chrX 131354191 131354351 -35295945 + B2_Mm2 SINE B2 2 160 -35 7 1587 333 0 0 0 chrX 131354351 131354388 -35295908 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 8 1587 1250 122 16 32 chrX 131354388 131354414 -35295882 + B2_Mm2 SINE B2 161 185 -10 7 1587 274 187 66 0 chrX 131354442 131354533 -35295763 + (TA)n Simple_repeat Simple_repeat 2 98 0 8 1587 2724 35 0 6 chrX 131354611 131354926 -35295370 + L1Md_F2 LINE L1 6266 6578 -4 8 1587 557 311 67 0 chrX 131354968 131355132 -35295164 + B4A SINE B4 33 207 -85 8 1587 287 202 0 11 chrX 131355142 131355232 -35295064 + GA-rich Low_complexity Low_complexity 2 90 0 8 1587 351 0 0 0 chrX 131355233 131355272 -35295024 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1587 336 24 0 0 chrX 131355272 131355312 -35294984 + (GA)n Simple_repeat Simple_repeat 2 42 0 8 1587 216 385 0 0 chrX 131355597 131355680 -35294616 + ID4_ SINE ID 1 83 0 8 1587 204 40 0 0 chrX 131356154 131356179 -35294117 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 1587 1370 155 14 5 chrX 131356353 131356573 -35293723 - URR1A DNA MER1_type 0 226 5 8 1587 446 286 111 28 chrX 131356966 131356990 -35293306 - RSINE1 SINE B4 -8 157 133 8 1587 444 37 0 0 chrX 131356990 131357044 -35293252 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 1587 446 286 111 28 chrX 131357044 131357163 -35293133 - RSINE1 SINE B4 -33 132 2 8 1587 948 286 89 28 chrX 131357259 131357583 -35292713 - MLT1A0 LTR MaLR -21 344 1 8 1587 888 43 95 0 chrX 131357988 131358104 -35292192 - L1_Mus1 LINE L1 0 6567 6441 8 1587 6644 45 6 1 chrX 131358104 131358892 -35291404 + L1_Mus1 LINE L1 5641 6432 -135 8 1587 276 326 11 0 chrX 131358897 131358986 -35291310 - PB1D10 SINE Alu -5 112 23 8 1587 285 29 0 0 chrX 131359014 131359048 -35291248 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 1587 522 0 0 0 chrX 131359048 131359105 -35291191 + (GA)n Simple_repeat Simple_repeat 2 59 0 8 1587 299 307 51 34 chrX 131359105 131359223 -35291073 - ID_B1 SINE B4 -3 221 102 8 1587 259 240 0 0 chrX 131359404 131359454 -35290842 - PB1 SINE Alu -35 92 43 8 1587 448 301 29 23 chrX 131359586 131359794 -35290502 - L1MD LINE L1 -2372 5623 5419 8 1587 769 284 48 66 chrX 131359809 131360419 -35289877 - L1MD LINE L1 -841 5305 4730 8 1587 193 206 37 171 chrX 131360627 131360709 -35289587 + L2b LINE L2 3305 3375 0 8 1587 292 316 144 59 chrX 131360828 131361148 -35289148 + L2 LINE L2 589 935 -2484 8 1587 2773 91 8 6 chrX 131361179 131361545 -35288751 - Lx3_Mus LINE L1 0 7009 6643 8 1587 7707 71 38 8 chrX 131361545 131362586 -35287710 + Lx3_Mus LINE L1 5588 6660 -349 8 1587 369 0 0 0 chrX 131362634 131362675 -35287621 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 1587 353 259 172 38 chrX 131363736 131364033 -35286263 - MLT1A1 LTR MaLR -12 396 14 8 1587 311 44 22 0 chrX 131364490 131364535 -35285761 + (TTA)n Simple_repeat Simple_repeat 1 46 0 8 1587 361 306 52 104 chrX 131365054 131365137 -35285159 + L1M5 LINE L1 2335 2418 -3728 8 1587 832 227 51 10 chrX 131365137 131365333 -35284963 + B3 SINE B2 1 204 -12 8 1587 361 306 52 104 chrX 131365333 131365519 -35284777 + L1M5 LINE L1 2419 2590 -3556 8 1587 332 302 36 54 chrX 131365528 131365640 -35284656 + PB1D10 SINE Alu 1 110 -7 8 1587 1864 290 54 28 chrX 131365640 131366289 -35284007 + Lx8 LINE L1 6588 7253 -220 8 1587 305 197 0 47 chrX 131366290 131366354 -35283942 + RMER15 LTR ERVL 410 470 -105 8 1587 2121 195 32 5 chrX 131366474 131366882 -35283414 + MTD LTR MaLR 1 419 0 8 1587 365 336 50 60 chrX 131367151 131367468 -35282828 - L2a LINE L2 -4 3422 3109 8 1587 242 278 131 20 chrX 131367633 131367732 -35282564 - ID_B1 SINE B4 -2 222 113 8 1587 633 311 106 53 chrX 131367816 131368081 -35282215 + LTR16A1 LTR ERVL 165 443 -13 8 1587 266 394 12 31 chrX 131368400 131368560 -35281736 - MamGypLTR1b LTR Gypsy 0 784 628 8 1587 839 355 82 48 chrX 131368644 131369106 -35281190 - MamGypLTR1b LTR Gypsy -282 500 23 8 1587 295 177 12 12 chrX 131369108 131369160 -35281136 + (TA)n Simple_repeat Simple_repeat 2 53 0 8 1587 444 82 0 0 chrX 131369160 131369221 -35281075 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 1587 295 177 12 12 chrX 131369221 131369248 -35281048 + (TA)n Simple_repeat Simple_repeat 1 27 0 8 1587 497 210 194 0 chrX 131369277 131369401 -35280895 - B1_Mur2 SINE Alu 0 149 2 8 1587 355 143 0 35 chrX 131369415 131369473 -35280823 - HAL1-3A_ME LINE L1 -828 2030 1975 8 1587 210 288 0 17 chrX 131369474 131369534 -35280762 + (TATATG)n Simple_repeat Simple_repeat 5 63 0 8 1587 711 277 51 122 chrX 131369537 131369751 -35280545 - B4A SINE B4 -16 208 10 8 1587 21 36 0 0 chrX 131371385 131371413 -35278883 + AT_rich Low_complexity Low_complexity 1 28 0 8 1587 1165 66 0 0 chrX 131371414 131371550 -35278746 + B1_Mus1 SINE Alu 1 136 -12 8 1587 315 0 0 0 chrX 131371550 131371585 -35278711 + (TA)n Simple_repeat Simple_repeat 1 35 0 8 1587 21 0 0 0 chrX 131371622 131371643 -35278653 + AT_rich Low_complexity Low_complexity 1 21 0 8 1587 216 376 48 0 chrX 131371658 131371783 -35278513 - MIR SINE MIR -26 236 106 8 1587 1251 75 0 0 chrX 131372059 131372206 -35278090 + B1_Mus2 SINE Alu 1 147 0 8 1587 4559 272 53 15 chrX 131372254 131373489 -35276807 + Lx8 LINE L1 6191 7471 -2 8 1587 984 273 97 44 chrX 131373545 131373935 -35276361 - Lx8 LINE L1 -3 7470 7060 8 1587 1222 266 137 72 chrX 131373982 131374465 -35275831 - Lx8 LINE L1 -685 6788 6275 8 1587 211 175 17 17 chrX 131374484 131374542 -35275754 + (TA)n Simple_repeat Simple_repeat 1 58 0 8 1587 253 292 108 0 chrX 131374783 131374848 -35275448 - ID4_ SINE ID -3 80 9 8 1587 6693 172 34 24 chrX 131374922 131376889 -35273407 + Lx6 LINE L1 4761 6749 -711 8 1587 603 304 86 26 chrX 131376919 131377223 -35273073 - Lx8 LINE L1 -73 7400 7079 8 1587 419 249 147 36 chrX 131377243 131377468 -35272828 - L1MD LINE L1 -2351 3795 3546 8 1587 423 309 146 30 chrX 131378418 131378748 -35271548 + Lx6 LINE L1 6953 7320 -153 8 1587 200 0 100 0 chrX 131379469 131379499 -35270797 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 8 1587 306 0 0 0 chrX 131380474 131380508 -35269788 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 1587 275 298 35 14 chrX 131380555 131380645 -35269651 + ID4_ SINE ID 3 99 -53 8 1587 909 77 17 8 chrX 131380964 131381082 -35269214 + PB1D9 SINE Alu 2 120 0 8 1587 207 0 0 0 chrX 131381088 131381111 -35269185 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 8 1587 222 394 15 0 chrX 131381242 131381308 -35268988 - B4 SINE B4 -161 131 65 8 1587 23 0 0 0 chrX 131381395 131381418 -35268878 + AT_rich Low_complexity Low_complexity 1 23 0 8 1587 600 211 156 0 chrX 131381426 131381554 -35268742 - B1_Mur1 SINE Alu 0 149 2 8 1587 10128 118 25 3 chrX 131381647 131383671 -35266625 + Lx2A LINE L1 4926 6988 -20 8 1587 252 0 0 0 chrX 131383671 131383699 -35266597 + (TAA)n Simple_repeat Simple_repeat 2 29 0 8 1587 3199 40 0 11 chrX 131384451 131384826 -35265470 - L1Md_F2 LINE L1 -6 6576 6206 8 1587 495 205 71 0 chrX 131384861 131384988 -35265308 + Lx7 LINE L1 7544 7679 -17 8 1587 1534 57 17 0 chrX 131384993 131385170 -35265126 + B2_Mm2 SINE B2 2 181 -14 8 1587 1192 58 0 0 chrX 131385171 131385309 -35264987 + B1_Mus2 SINE Alu 2 139 -8 8 1587 190 91 30 0 chrX 131386254 131386287 -35264009 + L3 LINE CR1 879 912 -3577 8 1587 186 316 71 50 chrX 131387637 131387777 -35262519 - MIRb SINE MIR -23 245 103 8 1587 1463 23 6 11 chrX 131387826 131388003 -35262293 + L1Md_F2 LINE L1 6406 6581 -1 8 1587 3116 289 85 40 chrX 131388067 131389256 -35261040 - Lx8 LINE L1 -11 7462 6221 8 1587 3357 38 2 0 chrX 131389258 131389653 -35260643 - MTA_Mm LTR MaLR 0 396 1 8 1587 713 257 122 0 chrX 131389912 131390134 -35260162 - MLT1A LTR MaLR 0 374 126 8 1587 210 37 0 0 chrX 131391897 131391924 -35258372 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 8 1587 401 266 9 9 chrX 131392200 131392310 -35257986 - PB1D7 SINE Alu -8 112 3 8 1587 1557 210 13 6 chrX 131392480 131392796 -35257500 + Lx9 LINE L1 7162 7479 -165 8 1587 290 67 0 22 chrX 131392798 131392844 -35257452 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1587 317 190 13 0 chrX 131392846 131392925 -35257371 + Lx9 LINE L1 7517 7596 -48 8 1587 297 273 89 80 chrX 131393348 131393495 -35256801 + B1_Mur1 SINE Alu 1 148 -1 8 1587 2024 206 22 17 chrX 131393677 131394092 -35256204 + MTD LTR MaLR 1 417 -2 8 1587 1849 139 108 3 chrX 131394118 131394450 -35255846 + ORR1B2 LTR MaLR 1 367 0 8 1587 961 303 94 20 chrX 131394795 131395145 -35255151 + MER21B LTR ERV1 61 436 -427 8 1587 333 291 56 40 chrX 131395145 131395289 -35255007 - MTEb LTR MaLR 0 379 232 8 1587 282 235 0 42 chrX 131395293 131395364 -35254932 + GA-rich Low_complexity Low_complexity 2 69 0 8 1587 208 298 0 0 chrX 131395528 131395585 -35254711 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 1587 187 330 177 61 chrX 131395704 131396014 -35254282 + L2 LINE L2 2344 2689 -730 8 1587 27 0 0 0 chrX 131396286 131396313 -35253983 + AT_rich Low_complexity Low_complexity 1 27 0 8 1587 676 261 136 0 chrX 131396322 131396506 -35253790 + B3 SINE B2 3 211 -5 8 1587 356 345 57 92 chrX 131396889 131397348 -35252948 + L2a LINE L2 1633 2075 -1344 8 1587 23 54 0 0 chrX 131397390 131397427 -35252869 + AT_rich Low_complexity Low_complexity 1 37 0 8 1587 584 283 0 8 chrX 131397721 131397849 -35252447 - RSINE1 SINE B4 -38 127 1 8 1587 1102 264 105 26 chrX 131397982 131398325 -35251971 - ORR1D2 LTR MaLR 0 370 1 8 1587 892 180 0 42 chrX 131398686 131398877 -35251419 + B2_Mm2 SINE B2 2 184 -11 8 1587 221 298 30 50 chrX 131399004 131399103 -35251193 - MIRb SINE MIR -55 213 117 8 1587 450 225 345 21 chrX 131399106 131399347 -35250949 - ORR1D2 LTR MaLR -7 367 1 8 1587 656 242 155 0 chrX 131399457 131399618 -35250678 - B3 SINE B2 -6 210 25 8 1587 703 231 83 52 chrX 131399789 131399981 -35250315 + B3A SINE B2 1 198 0 8 1587 3734 157 46 30 chrX 131400059 131400735 -35249561 + RLTR17 LTR ERVK 1 687 -5 8 1587 488 76 0 0 chrX 131400735 131400801 -35249495 - L1_Mus2 LINE L1 -621 5945 5880 9 1587 1108 33 0 56 chrX 131400801 131400961 -35249335 + L1_Mus2 LINE L1 6416 6566 0 9 1587 185 322 0 78 chrX 131401169 131401233 -35249063 + L2a LINE L2 3347 3405 -21 8 1587 723 259 0 0 chrX 131401685 131401824 -35248472 - RSINE1 SINE B4 -21 144 6 9 1587 3276 283 41 39 chrX 131402033 131402615 -35247681 + Lx8 LINE L1 5501 6156 -1317 9 1587 1191 54 0 0 chrX 131402615 131402763 -35247533 + B1_Mus1 SINE Alu 1 148 0 9 1587 3276 313 73 55 chrX 131402763 131403165 -35247131 + Lx8 LINE L1 6157 6524 -949 9 1587 1095 39 0 0 chrX 131403165 131403295 -35247001 - B1_Mus2 SINE Alu -17 130 1 9 1587 3276 313 73 55 chrX 131403295 131404056 -35246240 + Lx8 LINE L1 6525 7306 -167 9 1587 451 331 65 77 chrX 131404250 131404587 -35245709 + Lx8 LINE L1 7123 7455 -18 9 1587 229 158 0 0 chrX 131404725 131404759 -35245537 - B4 SINE B4 -69 223 190 9 1587 2637 150 96 43 chrX 131404759 131405182 -35245114 + RLTR20A LTR ERVK 1 415 -126 9 1587 432 0 0 0 chrX 131405182 131405230 -35245066 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 1587 2637 150 96 43 chrX 131405230 131405315 -35244981 + RLTR20A LTR ERVK 416 535 -6 9 1587 323 197 0 32 chrX 131405333 131405396 -35244900 - B4 SINE B4 -91 201 141 9 1587 470 231 162 13 chrX 131405484 131405623 -35244673 - B4 SINE B4 -135 157 5 9 1587 24 32 0 0 chrX 131405807 131405838 -35244458 + AT_rich Low_complexity Low_complexity 1 31 0 9 1587 526 221 189 0 chrX 131407541 131407663 -35242633 - B1_Mus2 SINE Alu 0 147 3 9 1587 1178 231 37 48 chrX 131408731 131409026 -35241270 - B4 SINE B4 0 292 1 9 1587 189 107 0 0 chrX 131411881 131411909 -35238387 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 9 1587 363 44 0 0 chrX 131412152 131412197 -35238099 + (TTA)n Simple_repeat Simple_repeat 2 46 0 9 1587 1293 43 0 0 chrX 131412591 131412752 -35237544 - L1_Mus1 LINE L1 -2 6565 6405 9 1587 24 53 0 0 chrX 131412777 131412815 -35237481 + AT_rich Low_complexity Low_complexity 1 38 0 9 1587 1568 237 51 17 chrX 131413537 131413889 -35236407 + ORR1D2 LTR MaLR 6 369 -1 9 1587 21 36 0 0 chrX 131414348 131414376 -35235920 + AT_rich Low_complexity Low_complexity 1 28 0 9 1587 278 26 26 0 chrX 131414470 131414509 -35235787 + (TG)n Simple_repeat Simple_repeat 1 40 0 9 1587 339 25 0 0 chrX 131414509 131414548 -35235748 + (GA)n Simple_repeat Simple_repeat 1 40 0 9 1587 322 359 38 0 chrX 131414548 131414654 -35235642 - RSINE1 SINE B4 -51 114 5 9 1587 3925 63 19 0 chrX 131415460 131415984 -35234312 + Lx3_Mus LINE L1 6476 7009 0 9 1587 505 295 169 27 chrX 131417223 131417525 -35232771 + MLT1G1 LTR MaLR 2 348 -247 9 1587 242 310 56 4 chrX 131417568 131417697 -35232599 + MLT1G1 LTR MaLR 347 576 -3 9 1587 184 122 49 0 chrX 131418584 131418625 -35231671 + (TATATG)n Simple_repeat Simple_repeat 4 46 0 9 1587 546 331 0 24 chrX 131418958 131419122 -35231174 - RSINE1 SINE B4 -1 164 5 9 1587 24 0 0 0 chrX 131419490 131419514 -35230782 + AT_rich Low_complexity Low_complexity 1 24 0 9 1587 1740 195 133 0 chrX 131419596 131419965 -35230331 + MTD LTR MaLR 2 419 0 9 1587 250 320 44 70 chrX 131420031 131420189 -35230107 - MIRb SINE MIR -93 175 22 9 1587 687 194 35 35 chrX 131420492 131420636 -35229660 + B1F1 SINE Alu 6 149 0 9 1587 552 68 0 0 chrX 131420874 131420947 -35229349 + (TG)n Simple_repeat Simple_repeat 2 74 0 9 1587 2902 188 29 22 chrX 131421050 131421595 -35228701 + Lx7 LINE L1 6859 7407 -289 9 1587 705 126 0 0 chrX 131421597 131421708 -35228588 + (TC)n Simple_repeat Simple_repeat 1 111 0 9 1587 284 325 33 25 chrX 131421745 131421865 -35228431 + Lx7 LINE L1 7532 7652 -44 9 1587 249 308 63 26 chrX 131422009 131422150 -35228146 + MIR SINE MIR 103 245 -23 9 1587 7930 61 20 0 chrX 131422732 131424269 -35226027 + L1_Mus1 LINE L1 4990 6566 -1 9 1587 271 339 91 5 chrX 131424309 131424496 -35225800 + L1M5 LINE L1 5564 5766 -428 9 1587 180 0 0 0 chrX 131424556 131424576 -35225720 + (TC)n Simple_repeat Simple_repeat 1 20 0 9 1587 450 0 0 0 chrX 131424577 131424627 -35225669 + (TA)n Simple_repeat Simple_repeat 2 51 0 9 1587 479 261 65 0 chrX 131426122 131426275 -35224021 + L1M5 LINE L1 5544 5706 -418 9 1587 474 65 0 0 chrX 131426395 131426457 -35223839 + (TC)n Simple_repeat Simple_repeat 1 62 0 9 1587 528 59 0 0 chrX 131426527 131426595 -35223701 + (TC)n Simple_repeat Simple_repeat 1 68 0 9 1587 426 39 0 0 chrX 131426666 131426718 -35223578 + (TC)n Simple_repeat Simple_repeat 1 52 0 9 1587 231 146 0 0 chrX 131426718 131426759 -35223537 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 1587 38604 3 0 0 chrX 131427218 131431851 -35218445 + L1Md_A LINE L1 954 5586 -297 9 1587 9008 3 0 0 chrX 131431851 131432847 -35217449 + L1Md_A LINE L1 5587 6582 0 9 1587 246 86 0 0 chrX 131432923 131432958 -35217338 + ORR1D-int LTR MaLR 1258 1292 -78 9 1587 912 257 30 126 chrX 131433001 131433406 -35216890 + ORR1D2 LTR MaLR 1 366 -4 9 1587 1529 47 5 5 chrX 131433406 131433598 -35216698 + B2_Mm1a SINE B2 2 193 0 9 1587 197 140 0 57 chrX 131433685 131433738 -35216558 + T-rich Low_complexity Low_complexity 1 50 0 9 1587 264 77 0 0 chrX 131433980 131434019 -35216277 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 1587 638 197 0 25 chrX 131434079 131434199 -35216097 - PB1D9 SINE Alu -3 117 1 9 1587 694 266 45 113 chrX 131434541 131434596 -35215700 + B4 SINE B4 21 74 -218 9 1587 263 49 0 24 chrX 131434596 131434638 -35215658 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 9 1587 694 266 45 113 chrX 131434638 131434874 -35215422 + B4 SINE B4 75 292 0 9 1587 269 253 21 21 chrX 131435237 131435334 -35214962 + Lx6 LINE L1 7349 7445 -15 9 1587 372 103 0 0 chrX 131436380 131436438 -35213858 + (CCA)n Simple_repeat Simple_repeat 3 60 0 9 1587 556 254 0 0 chrX 131436491 131436601 -35213695 - RSINE1 SINE B4 -53 112 3 9 1587 537 158 25 0 chrX 131437004 131437124 -35213172 + CT-rich Low_complexity Low_complexity 2 124 0 9 1587 565 257 128 41 chrX 131437156 131437351 -35212945 - B3A SINE B2 -2 214 3 9 1587 3524 99 0 2 chrX 131437392 131437889 -35212407 + Lx LINE L1 6158 6653 -1 9 1587 311 387 29 19 chrX 131438061 131438269 -35212027 + MIRb SINE MIR 56 265 -3 9 1587 450 308 106 15 chrX 131439009 131439207 -35211089 - B3 SINE B2 0 216 1 9 1587 623 194 70 31 chrX 131439260 131439388 -35210908 - B1F2 SINE Alu -5 144 12 9 1587 21 0 0 0 chrX 131439712 131439733 -35210563 + AT_rich Low_complexity Low_complexity 1 21 0 9 1587 454 227 98 14 chrX 131439820 131439963 -35210333 + L1MC3 LINE L1 5780 5934 -1851 9 1587 267 247 131 36 chrX 131440077 131440161 -35210135 + B1F2 SINE Alu 53 144 -5 9 1587 272 315 93 7 chrX 131440401 131440442 -35209854 - MER34A1 LTR ERV1 -416 171 128 9 1587 198 0 0 0 chrX 131440442 131440464 -35209832 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 9 1587 272 315 93 7 chrX 131440464 131440572 -35209724 - MER34A1 LTR ERV1 -460 127 10 9 1587 262 201 22 24 chrX 131441504 131441583 -35208713 - MIRc SINE MIR -99 177 99 9 1587 567 285 120 0 chrX 131441972 131442172 -35208124 - MER2 DNA MER2_type -121 224 1 9 1587 835 316 28 23 chrX 131442306 131442740 -35207556 - L1M5 LINE L1 -3501 2645 2210 9 1587 246 260 0 38 chrX 131443043 131443077 -35207219 + A-rich Low_complexity Low_complexity 1 32 0 9 1587 1081 115 0 0 chrX 131443077 131443225 -35207071 + B1_Mus1 SINE Alu 1 148 0 9 1587 246 260 0 38 chrX 131443225 131443270 -35207026 + A-rich Low_complexity Low_complexity 33 77 0 9 1587 238 298 95 0 chrX 131443530 131443614 -35206682 - L1MA4 LINE L1 -347 5953 5862 9 1587 259 192 51 0 chrX 131443628 131443706 -35206590 + (TA)n Simple_repeat Simple_repeat 1 82 0 9 1587 1322 281 120 14 chrX 131443710 131445048 -35205248 - L1MA4 LINE L1 -509 5791 4296 9 1587 215 253 24 37 chrX 131445391 131445427 -35204869 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 9 1587 321 100 0 0 chrX 131445427 131445477 -35204819 + (TCCA)n Simple_repeat Simple_repeat 3 52 0 9 1587 215 253 24 37 chrX 131445477 131445522 -35204774 + (TCTA)n Simple_repeat Simple_repeat 2 44 0 9 1587 1225 249 79 44 chrX 131445614 131445980 -35204316 + MTE2a LTR MaLR 1 379 0 9 1587 2205 92 3 60 chrX 131446593 131446929 -35203367 - ORR1A2 LTR MaLR -10 317 1 9 1587 238 132 19 19 chrX 131447054 131447108 -35203188 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 9 1587 182 360 11 22 chrX 131447791 131447882 -35202414 - L2c LINE L2 -231 3156 3067 9 1587 458 240 186 0 chrX 131448666 131448795 -35201501 - RSINE1 SINE B4 -11 154 2 9 1587 3536 81 6 26 chrX 131449133 131449626 -35200670 - L1_Mus3 LINE L1 -5 6633 6151 9 1587 890 249 53 36 chrX 131449791 131449833 -35200463 - L1MA6 LINE L1 -1 6299 6263 9 1587 3301 29 29 0 chrX 131449833 131450218 -35200078 - MTA_Mm LTR MaLR 0 396 1 9 1587 890 249 53 36 chrX 131450218 131450587 -35199709 - L1MA6 LINE L1 -38 6262 5881 9 1587 23 0 0 0 chrX 131450610 131450633 -35199663 + AT_rich Low_complexity Low_complexity 1 23 0 9 1587 611 285 114 74 chrX 131450640 131450916 -35199380 + L1MB8 LINE L1 5628 5950 -228 9 1587 982 231 10 5 chrX 131450916 131451125 -35199171 + B3 SINE B2 1 210 -6 9 1587 611 285 114 74 chrX 131451125 131451292 -35199004 + L1MB8 LINE L1 5951 6111 -67 9 1587 1221 54 0 0 chrX 131451292 131451439 -35198857 + B1_Mus1 SINE Alu 2 148 0 9 1587 611 285 114 74 chrX 131451439 131451521 -35198775 + L1MB8 LINE L1 6112 6175 -3 9 1587 706 200 111 43 chrX 131452191 131452426 -35197870 + Lx9 LINE L1 7226 7476 -168 9 1587 450 0 0 0 chrX 131452426 131452476 -35197820 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 1587 351 194 21 11 chrX 131452477 131452571 -35197725 + Lx9 LINE L1 7529 7623 -21 9 1587 205 314 40 32 chrX 131452594 131452719 -35197577 - L2a LINE L2 -57 3369 3244 9 1587 1024 234 35 3 chrX 131452795 131453082 -35197214 + L1MA5 LINE L1 5999 6294 -6 9 1587 837 189 0 0 chrX 131453404 131453573 -35196723 + CT-rich Low_complexity Low_complexity 2 170 0 9 1587 369 238 9 0 chrX 131453670 131453775 -35196521 + Lx9 LINE L1 7527 7632 -12 9 1587 2929 223 91 36 chrX 131453778 131454150 -35196146 - Lx7 LINE L1 -915 6781 6391 9 1587 2229 155 85 5 chrX 131454150 131454540 -35195756 + MTC LTR MaLR 1 421 0 9 1587 2929 223 91 36 chrX 131454540 131454963 -35195333 - Lx7 LINE L1 -1306 6390 5943 9 1587 1300 104 83 15 chrX 131454987 131455192 -35195104 + ORR1C1 LTR MaLR 160 378 0 9 1587 2264 182 17 21 chrX 131455192 131455621 -35194675 - Lx7 LINE L1 -6 5874 5445 9 1587 487 0 32 0 chrX 131455621 131455684 -35194612 + (TG)n Simple_repeat Simple_repeat 2 66 0 9 1587 2264 182 17 21 chrX 131455684 131455720 -35194576 - Lx7 LINE L1 -436 5444 5411 9 1587 1170 162 35 17 chrX 131455744 131455976 -35194320 + Lx7 LINE L1 7095 7330 -366 9 1587 1306 136 5 9 chrX 131456033 131456248 -35194048 + Lx3C LINE L1 6754 6967 -9 1 1587 355 312 110 14 chrX 131456383 131456529 -35193767 - B4 SINE B4 -68 224 65 1 1587 225 239 81 49 chrX 131456648 131456771 -35193525 - L1MA7 LINE L1 -29 6262 6136 1 1587 21 36 0 0 chrX 131456777 131456805 -35193491 + AT_rich Low_complexity Low_complexity 1 28 0 1 1587 576 260 30 72 chrX 131456844 131457010 -35193286 - RSINE1 SINE B4 -4 161 3 1 1587 540 0 0 0 chrX 131457273 131457333 -35192963 + (CAAAC)n Simple_repeat Simple_repeat 2 61 0 1 1587 216 0 0 0 chrX 131457845 131457869 -35192427 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1587 180 0 0 0 chrX 131459034 131459054 -35191242 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1587 243 0 0 0 chrX 131459870 131459897 -35190399 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1587 5048 72 0 9 chrX 131459915 131460572 -35189724 - L1Md_F2 LINE L1 -19 6563 5913 1 1587 2538 73 53 73 chrX 131460585 131460997 -35189299 - L1_Mus1 LINE L1 0 6567 6164 1 1587 3682 93 0 0 chrX 131460997 131461552 -35188744 + L1Md_F3 LINE L1 5365 5919 -665 1 1587 476 274 38 33 chrX 131461840 131462051 -35188245 - L1M1 LINE L1 -490 5810 5599 1 1587 1835 146 34 0 chrX 131462965 131463243 -35187053 + RLTR18B LTR ERVK 199 486 -26 1 1587 2214 195 128 6 chrX 131463243 131463718 -35186578 - MT2A LTR ERVL 0 533 1 1 1587 604 249 102 12 chrX 131464747 131464914 -35185382 + MER5A DNA MER1_type 1 182 -7 1 1588 519 321 34 22 chrX 131465395 131465710 -35184586 - B4A SINE B4 0 292 10 1 1588 592 265 21 129 chrX 131466523 131466709 -35183587 - B4 SINE B4 -20 272 107 1 1588 183 80 0 0 chrX 131467321 131467346 -35182950 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1 1588 1192 61 0 0 chrX 131467383 131467530 -35182766 - B1_Mus1 SINE Alu 0 148 2 1 1588 4037 246 28 9 chrX 131468704 131469703 -35180593 + Lx5 LINE L1 6028 7045 -5 1 1588 280 245 0 0 chrX 131470423 131470476 -35179820 - ID4_ SINE ID -29 54 2 1 1588 207 0 0 0 chrX 131470607 131470630 -35179666 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1588 216 304 78 35 chrX 131471436 131471552 -35178744 + MIRb SINE MIR 113 233 -35 1 1588 198 91 0 0 chrX 131471997 131472030 -35178266 + (CCAA)n Simple_repeat Simple_repeat 4 36 0 1 1588 204 107 52 35 chrX 131472171 131472229 -35178067 + (CAAAC)n Simple_repeat Simple_repeat 3 61 0 1 1588 1187 68 0 0 chrX 131472577 131472725 -35177571 + B1_Mus1 SINE Alu 1 148 0 1 1588 603 206 28 0 chrX 131472887 131472994 -35177302 - RSINE1 SINE B4 -33 132 23 1 1588 273 57 0 0 chrX 131473077 131473112 -35177184 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1588 536 320 68 38 chrX 131473127 131473393 -35176903 - B4A SINE B4 -16 276 3 1 1588 916 138 26 0 chrX 131473681 131473833 -35176463 - URR1A DNA MER1_type -9 217 62 1 1588 348 309 84 35 chrX 131473873 131474088 -35176208 - MLT2D LTR ERVL -171 293 65 1 1588 21 0 0 0 chrX 131474390 131474411 -35175885 + AT_rich Low_complexity Low_complexity 1 21 0 1 1588 717 237 260 24 chrX 131476541 131476871 -35173425 + MTD LTR MaLR 3 419 0 1 1588 1517 270 50 14 chrX 131476950 131477393 -35172903 + Lx6 LINE L1 6976 7434 -26 1 1588 878 264 9 0 chrX 131477610 131477822 -35172474 + B3 SINE B2 3 216 0 1 1588 2263 281 91 51 chrX 131479497 131480924 -35169372 + L1_Mur3 LINE L1 3845 5328 -552 1 1588 4726 154 44 5 chrX 131480926 131481796 -35168500 + Lx2B LINE L1 5985 6888 -112 1 1588 1598 244 63 6 chrX 131481804 131482170 -35168126 + RMER15 LTR ERVL 139 525 -50 1 1588 1334 276 81 0 chrX 131482297 131482655 -35167641 + MTD LTR MaLR 33 419 0 1 1588 343 239 56 52 chrX 131482671 131482847 -35167449 - L1M3c LINE L1 -4525 2194 2008 1 1588 432 0 0 0 chrX 131483046 131483094 -35167202 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1588 1337 198 166 9 chrX 131483340 131483672 -35166624 + ORR1C2 LTR MaLR 1 384 0 1 1588 357 270 48 16 chrX 131483856 131484044 -35166252 - L1M4 LINE L1 -1738 4408 4215 1 1588 185 275 142 26 chrX 131485216 131485332 -35164964 - MIRm SINE MIR -112 150 31 1 1588 3478 72 46 0 chrX 131487924 131488385 -35161911 + L1_Mus1 LINE L1 6086 6567 0 1 1588 243 0 0 0 chrX 131488403 131488430 -35161866 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 1 1588 2532 68 0 12 chrX 131488903 131489243 -35161053 + L1Md_F2 LINE L1 6247 6582 0 1 1588 1043 260 25 93 chrX 131489318 131489725 -35160571 + MTE2a LTR MaLR 1 379 0 1 1588 311 250 53 0 chrX 131491384 131491460 -35158836 + URR1A DNA MER1_type 1 80 -146 1 1588 22 0 0 0 chrX 131492605 131492627 -35157669 + AT_rich Low_complexity Low_complexity 1 22 0 1 1588 2527 184 101 39 chrX 131493601 131494312 -35155984 + L1_Mur3 LINE L1 3246 4000 -1880 1 1588 2113 176 41 4 chrX 131494309 131494772 -35155524 + L1_Mur3 LINE L1 4537 5016 -864 1 1588 518 133 11 0 chrX 131494956 131495046 -35155250 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 1 1588 704 261 28 6 chrX 131495224 131495401 -35154895 + Lx9 LINE L1 6628 6808 -836 1 1588 1039 306 2 52 chrX 131495399 131495879 -35154417 + Lx9 LINE L1 7005 7460 -184 1 1588 23 0 0 0 chrX 131496056 131496079 -35154217 + AT_rich Low_complexity Low_complexity 1 23 0 1 1588 1187 62 0 0 chrX 131496084 131496230 -35154066 + B1_Mm SINE Alu 2 147 0 1 1588 180 0 0 0 chrX 131496230 131496250 -35154046 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1588 428 262 145 16 chrX 131496657 131496781 -35153515 - B1F SINE Alu 0 149 10 1 1588 23 33 0 0 chrX 131496878 131496908 -35153388 + AT_rich Low_complexity Low_complexity 1 30 0 1 1588 490 209 17 42 chrX 131497230 131497350 -35152946 + B1_Mur3 SINE Alu 33 149 0 1 1588 205 152 0 0 chrX 131497847 131497880 -35152416 + (CTCCG)n Simple_repeat Simple_repeat 3 35 0 1 1588 325 39 39 0 chrX 131497881 131497932 -35152364 + (CCCCG)n Simple_repeat Simple_repeat 5 57 0 1 1588 356 88 0 17 chrX 131498030 131498088 -35152208 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 1588 186 43 0 0 chrX 131498108 131498131 -35152165 + (CCCCCG)n Simple_repeat Simple_repeat 5 27 0 1 1588 513 208 50 0 chrX 131499544 131499645 -35150651 + PB1D9 SINE Alu 4 109 -11 1 1588 552 100 0 0 chrX 131499645 131499725 -35150571 + (ATGGTG)n Simple_repeat Simple_repeat 5 84 0 1 1588 1193 172 13 38 chrX 131499759 131499995 -35150301 + RLTR42-int LTR ERVK 2719 2948 -2574 1 1588 786 218 83 9 chrX 131500086 131500304 -35149992 + RLTR42-int LTR ERVK 4005 4238 -1284 1 1588 1243 126 11 0 chrX 131500318 131500508 -35149788 - B2_Mm1t SINE B2 -1 192 1 2 1588 507 262 13 32 chrX 131500516 131500670 -35149626 + RLTR42-int LTR ERVK 4288 4438 -1084 1 1588 2704 194 78 78 chrX 131500666 131501025 -35149271 + RLTR42-int LTR ERVK 4707 5061 -461 1 1588 189 0 0 0 chrX 131501025 131501046 -35149250 + (TTA)n Simple_repeat Simple_repeat 1 21 0 3 1588 4837 103 55 1 chrX 131501047 131501779 -35148517 - Lx3A LINE L1 -5 6976 6206 4 1588 2704 194 78 78 chrX 131501779 131502118 -35148178 + RLTR42-int LTR ERVK 5062 5407 -115 1 1588 498 262 140 18 chrX 131502177 131502406 -35147890 + Lx9 LINE L1 7374 7630 -14 5 1588 1000 229 102 35 chrX 131502416 131502840 -35147456 - L1M2 LINE L1 -1598 4545 4070 6 1588 24 85 0 0 chrX 131503024 131503083 -35147213 + AT_rich Low_complexity Low_complexity 1 59 0 7 1588 1805 286 33 61 chrX 131503903 131504902 -35145394 - Lx6 LINE L1 -66 7394 6065 8 1588 450 0 0 0 chrX 131505037 131505087 -35145209 + (TG)n Simple_repeat Simple_repeat 2 51 0 9 1588 21 0 0 0 chrX 131505437 131505458 -35144838 + AT_rich Low_complexity Low_complexity 1 21 0 1 1588 312 231 77 0 chrX 131506204 131506269 -35144027 - 5S rRNA rRNA -51 70 1 1 1588 221 254 14 14 chrX 131506702 131506774 -35143522 + GA-rich Low_complexity Low_complexity 2 73 0 1 1588 207 220 0 0 chrX 131506789 131506839 -35143457 + (CATA)n Simple_repeat Simple_repeat 4 53 0 1 1588 267 31 0 0 chrX 131507089 131507121 -35143175 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1 1588 26 30 0 0 chrX 131508652 131508685 -35141611 + AT_rich Low_complexity Low_complexity 1 33 0 1 1588 371 229 76 0 chrX 131509287 131509392 -35140904 + L1M2 LINE L1 2587 2699 -3444 1 1588 950 354 80 39 chrX 131509439 131510242 -35140054 + Lx8 LINE L1 6637 7472 -1 1 1588 884 295 86 47 chrX 131510269 131510756 -35139540 + L1MA5 LINE L1 5478 5983 -314 1 1588 1367 206 115 15 chrX 131511122 131511462 -35138834 + ORR1D1 LTR MaLR 1 374 0 1 1588 842 65 32 8 chrX 131511696 131511819 -35138477 + B2_Mm2 SINE B2 56 181 -14 2 1588 1218 48 0 0 chrX 131513007 131513153 -35137143 + B1_Mus2 SINE Alu 2 147 0 2 1588 234 91 0 0 chrX 131513153 131513186 -35137110 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1588 441 145 0 0 chrX 131513182 131513258 -35137038 + (GGA)n Simple_repeat Simple_repeat 3 78 0 2 1588 330 248 83 28 chrX 131513577 131513685 -35136611 + L1M2 LINE L1 4889 5002 -1141 1 1588 526 277 29 19 chrX 131513859 131514069 -35136227 + L1M2 LINE L1 5028 5239 -904 1 1588 516 245 0 0 chrX 131514071 131514214 -35136082 + (TA)n Simple_repeat Simple_repeat 1 143 0 2 1588 1177 234 158 0 chrX 131514221 131514688 -35135608 + L1M2 LINE L1 5254 5817 -483 1 1588 1069 92 0 0 chrX 131514840 131514982 -35135314 + B1_Mus2 SINE Alu 1 142 -5 2 1588 4185 77 23 46 chrX 131515237 131515894 -35134402 - Lx3A LINE L1 -2101 3785 3144 2 1588 14328 98 15 11 chrX 131515891 131516637 -35133659 + Lx3A LINE L1 3783 4528 -1358 2 1588 1216 55 0 0 chrX 131516637 131516782 -35133514 + B1_Mus1 SINE Alu 2 146 -2 2 1588 249 57 0 0 chrX 131516782 131516817 -35133479 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1588 14328 98 15 11 chrX 131516817 131517561 -35132735 + Lx3A LINE L1 4529 5268 -618 2 1588 195 42 0 0 chrX 131517561 131517585 -35132711 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 2 1588 14328 105 71 6 chrX 131517585 131519122 -35131174 + Lx3A LINE L1 5269 6947 -34 2 1588 672 160 0 0 chrX 131519122 131519241 -35131055 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 3 1588 193 316 0 17 chrX 131519388 131519446 -35130850 - MIRb SINE MIR -82 186 130 3 1588 651 314 0 0 chrX 131520177 131520336 -35129960 - RSINE1 SINE B4 -4 161 3 3 1588 782 235 19 39 chrX 131521056 131521264 -35129032 - B3 SINE B2 -9 207 4 3 1588 211 28 0 53 chrX 131521279 131521317 -35128979 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 3 1588 542 265 0 58 chrX 131521426 131521582 -35128714 - B1F SINE Alu -2 147 1 3 1588 1470 216 109 3 chrX 131521763 131522139 -35128157 + MTD LTR MaLR 4 419 0 3 1588 570 267 20 27 chrX 131522937 131523087 -35127209 - B3 SINE B2 -66 150 2 3 1588 184 167 71 0 chrX 131523218 131523260 -35127036 + L2a LINE L2 2871 2915 -504 3 1588 255 324 145 64 chrX 131523294 131523591 -35126705 + L2a LINE L2 2987 3307 -119 3 1588 408 363 71 20 chrX 131527355 131527650 -35122646 - Lx8 LINE L1 -11 7462 7153 3 1588 234 359 173 10 chrX 131527836 131528044 -35122252 + MIRc SINE MIR 2 243 -25 4 1588 207 266 8 39 chrX 131529033 131529162 -35121134 + (TATAA)n Simple_repeat Simple_repeat 2 126 0 4 1588 392 374 42 4 chrX 131529306 131529545 -35120751 + L1M3e LINE L1 52 299 -6731 4 1588 601 358 100 65 chrX 131529592 131530375 -35119921 + L1M3e LINE L1 1033 1842 -5188 4 1588 387 281 30 0 chrX 131531200 131531351 -35118945 + L1MA4 LINE L1 5714 5936 -364 4 1588 528 176 0 0 chrX 131531361 131531463 -35118833 + (TA)n Simple_repeat Simple_repeat 1 102 0 4 1588 25 31 0 0 chrX 131531696 131531728 -35118568 + AT_rich Low_complexity Low_complexity 1 32 0 4 1588 23 0 0 0 chrX 131531740 131531763 -35118533 + AT_rich Low_complexity Low_complexity 1 23 0 4 1588 198 0 0 0 chrX 131531904 131531926 -35118370 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 4 1588 416 260 94 35 chrX 131532332 131532535 -35117761 + L1MA5 LINE L1 5677 5891 -409 4 1588 800 201 0 26 chrX 131532617 131532770 -35117526 - B1_Mur4 SINE Alu -1 149 1 4 1588 21 82 0 0 chrX 131532924 131532973 -35117323 + AT_rich Low_complexity Low_complexity 1 49 0 5 1588 1153 34 0 33 chrX 131533512 131533664 -35116632 + B1_Mus2 SINE Alu 1 147 0 5 1588 414 276 34 25 chrX 131533666 131533785 -35116511 - MER5A DNA MER1_type -69 120 1 5 1588 303 240 114 9 chrX 131534022 131534127 -35116169 - PB1D10 SINE Alu -1 116 1 5 1588 727 80 10 0 chrX 131534366 131534466 -35115830 - L1_Mm LINE L1 -895 4988 4888 5 1588 3786 43 0 4 chrX 131534466 131534933 -35115363 + L1_Mus2 LINE L1 6102 6566 0 5 1588 406 319 73 7 chrX 131535058 131535194 -35115102 + RSINE1 SINE B4 2 146 -19 5 1588 369 298 39 0 chrX 131535375 131535479 -35114817 - MIRb SINE MIR -113 155 48 5 1588 2158 71 135 13 chrX 131535523 131535835 -35114461 + Lx2 LINE L1 6647 6996 -1 5 1588 283 180 98 0 chrX 131535921 131535982 -35114314 + Lx8 LINE L1 7184 7250 -223 5 1588 836 184 24 6 chrX 131536269 131536433 -35113863 + B2_Mm2 SINE B2 2 168 -27 6 1588 470 241 103 8 chrX 131536798 131536915 -35113381 + B1_Mur1 SINE Alu 1 128 -21 6 1588 25 0 0 0 chrX 131536969 131536994 -35113302 + AT_rich Low_complexity Low_complexity 1 25 0 6 1588 606 287 76 10 chrX 131537326 131537523 -35112773 - MER20 DNA MER1_type -6 213 4 6 1588 978 284 29 11 chrX 131539579 131539857 -35110439 - B4 SINE B4 -1 291 9 6 1588 830 206 36 31 chrX 131539896 131540091 -35110205 - B3A SINE B2 -1 197 2 6 1588 351 0 0 0 chrX 131541492 131541531 -35108765 + (GA)n Simple_repeat Simple_repeat 1 39 0 6 1588 322 292 58 8 chrX 131541822 131541943 -35108353 + PB1 SINE Alu 1 127 0 6 1588 191 36 0 35 chrX 131543237 131543266 -35107030 + (GGGTG)n Simple_repeat Simple_repeat 4 31 0 6 1588 255 61 0 0 chrX 131543281 131543314 -35106982 + (CGGGG)n Simple_repeat Simple_repeat 4 36 0 6 1588 203 147 0 0 chrX 131543701 131543735 -35106561 + (CCG)n Simple_repeat Simple_repeat 2 35 0 7 1588 22 35 0 0 chrX 131544625 131544654 -35105642 + AT_rich Low_complexity Low_complexity 1 29 0 7 1588 556 240 68 156 chrX 131544742 131544979 -35105317 - B3A SINE B2 0 216 1 7 1588 3334 132 49 18 chrX 131545031 131545579 -35104717 + RLTR12A LTR ERVK 1 565 -3 7 1588 709 158 70 28 chrX 131545670 131545813 -35104483 + B1_Mur4 SINE Alu 1 149 -1 7 1588 2047 248 102 44 chrX 131545830 131546538 -35103758 + Lx8 LINE L1 6667 7415 -58 7 1588 210 37 0 0 chrX 131547204 131547231 -35103065 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1588 852 259 11 11 chrX 131547369 131547556 -35102740 + B3 SINE B2 30 216 0 7 1588 347 251 49 0 chrX 131547815 131547916 -35102380 + B1F SINE Alu 5 117 0 7 1588 24 0 0 0 chrX 131548081 131548105 -35102191 + AT_rich Low_complexity Low_complexity 1 24 0 7 1588 814 243 78 21 chrX 131548105 131548298 -35101998 - B3 SINE B2 -11 205 2 8 1588 282 191 13 55 chrX 131548304 131548380 -35101916 - MLT1A1 LTR MaLR -327 81 1 8 1588 25 0 0 0 chrX 131548619 131548644 -35101652 + AT_rich Low_complexity Low_complexity 1 25 0 8 1588 23 0 0 0 chrX 131548660 131548683 -35101613 + AT_rich Low_complexity Low_complexity 1 23 0 8 1588 781 234 114 5 chrX 131548693 131548886 -35101410 + B3 SINE B2 1 214 -2 8 1588 984 192 16 21 chrX 131548914 131549105 -35101191 + B3 SINE B2 2 191 -25 8 1588 952 225 29 160 chrX 131549129 131549441 -35100855 - B4 SINE B4 0 292 22 8 1588 5024 175 29 14 chrX 131549448 131550430 -35099866 + Lx2B LINE L1 5992 6987 -13 8 1588 1056 235 58 117 chrX 131550614 131550990 -35099306 - MTE2a LTR MaLR -14 365 12 8 1588 355 352 96 20 chrX 131551113 131551467 -35098829 + ERVL-E-int LTR ERVL 2286 2666 -2330 8 1588 430 378 36 39 chrX 131551731 131551827 -35098469 + ERVL-E-int LTR ERVL 2989 3084 -2583 8 1588 1266 149 46 5 chrX 131551827 131552043 -35098253 - URR1A DNA MER1_type -1 225 1 9 1588 430 378 36 39 chrX 131552043 131552304 -35097992 + ERVL-E-int LTR ERVL 3085 3345 -2322 8 1588 324 0 0 0 chrX 131552350 131552386 -35097910 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 9 1588 805 74 25 0 chrX 131554006 131554127 -35096169 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 9 1588 1149 43 0 7 chrX 131554127 131554262 -35096034 - B1_Mus2 SINE Alu -8 139 5 9 1588 588 154 0 0 chrX 131554338 131554442 -35095854 + CT-rich Low_complexity Low_complexity 2 105 0 9 1588 207 0 0 0 chrX 131554445 131554468 -35095828 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 1588 644 245 0 0 chrX 131554468 131554607 -35095689 - B1_Mur2 SINE Alu -10 139 1 9 1588 387 268 0 0 chrX 131554608 131554690 -35095606 - 4.5SRNA scRNA scRNA -3 91 10 9 1588 664 259 156 60 chrX 131555197 131555530 -35094766 + MLT1A0 LTR MaLR 1 365 0 9 1588 291 270 50 133 chrX 131555543 131555649 -35094647 + MLT1A0-int LTR MaLR 33 132 -1239 9 1588 718 212 20 0 chrX 131555649 131555795 -35094501 + B1_Mur2 SINE Alu 1 149 0 9 1588 337 270 50 121 chrX 131555795 131555923 -35094373 + MLT1A0-int LTR MaLR 114 232 -1139 9 1588 290 296 86 0 chrX 131556979 131557060 -35093236 - MIR SINE MIR -155 107 20 1 1588 347 256 0 43 chrX 131558706 131558800 -35091496 - MER57-int LTR ERV1 -293 7244 7155 1 1588 461 296 98 43 chrX 131558838 131559140 -35091156 - LTR68 LTR ERV1 -159 581 274 1 1588 606 234 22 26 chrX 131559538 131559703 -35090593 - ORR1E LTR MaLR -14 405 245 1 1588 865 224 24 29 chrX 131559796 131560003 -35090293 - ORR1E LTR MaLR -122 237 32 1 1588 2148 315 80 118 chrX 131559985 131560200 -35090096 - ORR1E-int LTR MaLR -23 1557 1360 1 1588 912 224 48 5 chrX 131560200 131560406 -35089890 + B3 SINE B2 1 215 -1 1 1588 2148 315 80 118 chrX 131560406 131561807 -35088489 - ORR1E-int LTR MaLR -221 1359 2 1 1588 693 319 91 42 chrX 131561816 131562147 -35088149 - ORR1E LTR MaLR -6 353 7 1 1588 456 111 0 0 chrX 131562858 131562930 -35087366 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 1588 627 112 0 0 chrX 131562930 131563028 -35087268 + (GA)n Simple_repeat Simple_repeat 1 98 0 1 1588 430 252 220 9 chrX 131563040 131563263 -35087033 - Lx7 LINE L1 -369 5931 5677 1 1588 609 219 64 13 chrX 131563276 131563433 -35086863 + L1M2 LINE L1 5443 5607 -693 1 1588 855 193 7 0 chrX 131563433 131563578 -35086718 + B3 SINE B2 1 146 -70 1 1588 781 250 9 22 chrX 131563818 131564047 -35086249 + L1_Rod LINE L1 306 531 -6641 1 1588 540 0 0 0 chrX 131564594 131564654 -35085642 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 1588 1308 93 16 11 chrX 131564988 131565173 -35085123 + B2_Mm2 SINE B2 4 189 -6 1 1588 298 321 26 35 chrX 131565530 131565643 -35084653 + ID_B1 SINE B4 106 217 -7 1 1588 3839 100 14 10 chrX 131566346 131566921 -35083375 + Lx2A LINE L1 6430 7006 -2 1 1588 21 0 0 0 chrX 131567026 131567047 -35083249 + AT_rich Low_complexity Low_complexity 1 21 0 1 1588 1538 43 0 11 chrX 131567849 131568037 -35082259 - B2_Mm1a SINE B2 -6 187 2 1 1588 260 182 0 108 chrX 131568160 131568234 -35082062 + L1M2 LINE L1 4411 4476 -1667 1 1588 371 294 29 0 chrX 131568404 131568514 -35081782 - B1F1 SINE Alu -5 112 1 1 1588 598 292 19 13 chrX 131568883 131569039 -35081257 - RSINE1 SINE B4 -6 159 3 1 1588 231 36 0 0 chrX 131569098 131569126 -35081170 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1588 1891 111 164 20 chrX 131569200 131569541 -35080755 - ORR1B1 LTR MaLR 0 394 5 1 1588 431 262 0 64 chrX 131571060 131571170 -35079126 + RSINE1 SINE B4 2 104 -61 1 1588 322 330 0 31 chrX 131571209 131571306 -35078990 - ID_B1 SINE B4 -8 216 123 1 1588 257 255 0 0 chrX 131571667 131571718 -35078578 - ID2 SINE ID -1 82 32 1 1588 512 293 11 11 chrX 131571884 131572060 -35078236 - L1M5 LINE L1 -394 5770 5595 1 1588 423 221 30 69 chrX 131572142 131572273 -35078023 - B1_Mur2 SINE Alu -1 148 23 1 1588 28 0 0 0 chrX 131572473 131572501 -35077795 + AT_rich Low_complexity Low_complexity 1 28 0 1 1588 273 301 32 11 chrX 131572655 131572749 -35077547 + MER57A-int LTR ERV1 5798 5893 -294 1 1588 308 231 85 49 chrX 131573034 131573116 -35077180 - PB1D9 SINE Alu -34 86 2 1 1588 396 0 0 0 chrX 131573641 131573685 -35076611 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1588 230 303 55 92 chrX 131574171 131574207 -35076089 - B4 SINE B4 -181 111 7 1 1588 296 315 0 0 chrX 131574207 131574280 -35076016 - ID4_ SINE ID -4 79 7 1 1588 342 0 0 0 chrX 131574287 131574325 -35075971 + (GA)n Simple_repeat Simple_repeat 1 38 0 1 1588 295 280 53 0 chrX 131574326 131574401 -35075895 - B1F SINE Alu -19 130 52 1 1588 509 305 59 48 chrX 131574343 131574529 -35075767 - ID_B1 SINE B4 -34 190 3 1 1588 230 292 178 9 chrX 131591099 131591206 -35059090 + Tigger12 DNA MER2_type 1123 1247 -712 1 1588 378 0 0 0 chrX 131593511 131593553 -35056743 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 198 279 212 12 36 chrX 131596211 131596294 -35054002 + (CCCA)n Simple_repeat Simple_repeat 4 84 0 1 1589 203 333 25 8 chrX 131596875 131596996 -35053300 + (TCCA)n Simple_repeat Simple_repeat 1 123 0 1 1589 9211 68 3 2 chrX 131599707 131601572 -35048724 - L1Md_F2 LINE L1 -5 6577 4711 1 1589 375 111 0 0 chrX 131601823 131601877 -35048419 + MTD LTR MaLR 155 208 -211 1 1589 331 273 163 16 chrX 131601956 131602146 -35048150 - L1MDa LINE L1 -5164 1469 1252 1 1589 852 239 85 0 chrX 131602280 131602468 -35047828 - B3 SINE B2 -7 209 6 1 1589 2668 215 92 57 chrX 131603199 131603970 -35046326 + RMER12 LTR ERVK 1 798 -524 1 1589 687 234 48 133 chrX 131603939 131604210 -35046086 + RMER12 LTR ERVK 947 1194 -128 1 1589 974 301 76 23 chrX 131604719 131605113 -35045183 - Lx8 LINE L1 -97 7376 6962 1 1589 21 36 0 0 chrX 131605352 131605380 -35044916 + AT_rich Low_complexity Low_complexity 1 28 0 1 1589 1508 221 16 30 chrX 131605493 131605866 -35044430 - Lx7 LINE L1 -1 7695 7328 1 1589 1219 197 30 17 chrX 131605882 131606119 -35044177 - Lx7 LINE L1 -333 7363 7124 1 1589 953 131 0 6 chrX 131606223 131606400 -35043896 + (TC)n Simple_repeat Simple_repeat 2 177 0 1 1589 701 214 14 20 chrX 131606628 131606776 -35043520 - B1_Mur1 SINE Alu 0 149 3 1 1589 312 130 0 0 chrX 131606813 131606867 -35043429 - Lx8 LINE L1 0 7473 7420 1 1589 544 316 0 0 chrX 131606904 131607040 -35043256 - Lx8 LINE L1 -285 7188 7053 1 1589 231 203 33 17 chrX 131607037 131607097 -35043199 + Lx8 LINE L1 6768 6828 -645 1 1589 237 229 0 0 chrX 131607156 131607217 -35043079 + GA-rich Low_complexity Low_complexity 1 61 0 1 1589 330 26 0 0 chrX 131608469 131608508 -35041788 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 1589 1147 47 29 0 chrX 131608508 131608679 -35041617 + (CCCCCT)n Simple_repeat Simple_repeat 1 176 0 1 1589 557 150 76 144 chrX 131608681 131608813 -35041483 - B1_Mur4 SINE Alu -13 137 15 1 1589 315 273 26 43 chrX 131609041 131609156 -35041140 + PB1D10 SINE Alu 5 117 0 1 1589 327 237 26 13 chrX 131609183 131609260 -35041036 + ID4_ SINE ID 6 83 0 1 1589 348 336 69 35 chrX 131609309 131609540 -35040756 + MIR SINE MIR 23 261 -1 1 1589 234 0 0 0 chrX 131610040 131610066 -35040230 + (GA)n Simple_repeat Simple_repeat 1 26 0 1 1589 2356 270 28 17 chrX 131610462 131611225 -35039071 - Lx5 LINE L1 -17 7033 6455 1 1589 758 323 14 51 chrX 131613632 131613918 -35036378 - MTE2a LTR MaLR 0 379 105 1 1589 1563 132 76 44 chrX 131613918 131614234 -35036062 - ORR1A4 LTR MaLR -3 326 1 1 1589 204 246 0 0 chrX 131615595 131615664 -35034632 + (TGGA)n Simple_repeat Simple_repeat 3 71 0 1 1589 1877 203 13 24 chrX 131616476 131616854 -35033442 + ORR1D1 LTR MaLR 1 374 0 1 1589 1574 251 16 13 chrX 131617053 131617425 -35032871 - MTE2a LTR MaLR -1 378 6 1 1589 279 0 0 0 chrX 131620193 131620224 -35030072 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1589 592 158 0 32 chrX 131620259 131620383 -35029913 - L1Md_F2 LINE L1 0 6582 6463 1 1589 332 260 172 52 chrX 131620815 131620949 -35029347 + Lx8 LINE L1 6960 7109 -364 1 1589 232 312 149 36 chrX 131622507 131622923 -35027373 - MER92B LTR ERV1 -165 471 9 1 1589 1254 229 8 84 chrX 131624047 131624273 -35026023 + Lx9 LINE L1 5509 5716 -131 1 1589 798 194 191 39 chrX 131624273 131624628 -35025668 - RLTR9E LTR ERVK 0 409 1 1 1589 1278 301 70 65 chrX 131624628 131625675 -35024621 + Lx9 LINE L1 5717 7001 -643 1 1589 475 281 14 41 chrX 131625685 131625904 -35024392 + B3 SINE B2 4 216 0 1 1589 527 274 43 73 chrX 131625926 131626158 -35024138 + Lx9 LINE L1 6985 7209 -435 1 1589 371 195 32 0 chrX 131627154 131627277 -35023019 + (TG)n Simple_repeat Simple_repeat 1 127 0 1 1589 198 261 26 19 chrX 131627331 131627487 -35022809 + (TATG)n Simple_repeat Simple_repeat 2 158 0 1 1589 321 189 32 0 chrX 131627463 131627558 -35022738 + (TG)n Simple_repeat Simple_repeat 2 99 0 1 1589 479 141 11 0 chrX 131627622 131627714 -35022582 + GA-rich Low_complexity Low_complexity 1 93 0 1 1589 1000 269 71 8 chrX 131628000 131628378 -35021918 + MTD LTR MaLR 18 419 0 1 1589 519 202 1 24 chrX 131628679 131628811 -35021485 + ORR1B1 LTR MaLR 69 208 -186 1 1589 1674 168 16 75 chrX 131629329 131629702 -35020594 - ORR1B1 LTR MaLR -3 391 41 1 1589 234 0 0 0 chrX 131630412 131630438 -35019858 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1589 707 0 12 0 chrX 131630438 131630520 -35019776 + (GA)n Simple_repeat Simple_repeat 1 84 0 1 1589 634 235 15 8 chrX 131631990 131632123 -35018173 - B1_Mus1 SINE Alu -12 136 3 1 1589 892 247 14 0 chrX 131632294 131632513 -35017783 + MTC LTR MaLR 6 227 -194 1 1589 322 195 90 22 chrX 131632524 131632613 -35017683 - RLTR23 LTR ERV1 -5 425 331 1 1589 607 237 29 23 chrX 131633009 131633182 -35017114 + MTC LTR MaLR 243 416 -3 1 1589 383 279 14 35 chrX 131633665 131633810 -35016486 + RLTR15 LTR ERVK 1 142 -217 1 1589 423 0 0 0 chrX 131635460 131635507 -35014789 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1589 558 41 0 0 chrX 131635784 131635857 -35014439 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 1589 895 89 0 0 chrX 131635913 131636037 -35014259 - B1_Mus1 SINE Alu -2 146 23 1 1589 781 148 32 32 chrX 131637430 131637584 -35012712 + L1_Mus1 LINE L1 6403 6556 -11 1 1589 183 42 0 0 chrX 131637585 131637609 -35012687 + (TAA)n Simple_repeat Simple_repeat 1 24 0 1 1589 312 333 0 0 chrX 131637985 131638090 -35012206 + (CATATA)n Simple_repeat Simple_repeat 4 108 0 1 1589 318 332 62 76 chrX 131638464 131638689 -35011607 - RMER12 LTR ERVK 0 1322 1101 1 1589 3984 143 56 29 chrX 131638879 131639687 -35010609 - RLTR22_Mur LTR ERVK -1018 830 1 1 1589 2309 253 95 29 chrX 131640838 131641467 -35008829 + Lx7 LINE L1 5985 6668 -1028 1 1589 2555 74 3 6 chrX 131641467 131641795 -35008501 + ORR1A2 LTR MaLR 1 327 0 1 1589 2309 253 95 29 chrX 131641795 131641921 -35008375 + Lx7 LINE L1 6669 6790 -906 1 1589 707 243 22 16 chrX 131642001 131642185 -35008111 - B3 SINE B2 -6 210 26 1 1589 365 279 16 16 chrX 131642637 131642761 -35007535 + RSINE1 SINE B4 2 125 -40 1 1589 986 258 79 26 chrX 131642834 131643176 -35007120 + MTD LTR MaLR 9 368 -51 2 1589 627 14 0 0 chrX 131643390 131643462 -35006834 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 1589 1056 253 26 116 chrX 131644768 131645183 -35005113 + RMER5 LTR ERV1 3 380 -154 2 1589 342 0 0 0 chrX 131645188 131645226 -35005070 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1589 462 277 8 0 chrX 131645277 131645407 -35004889 + RMER5 LTR ERV1 395 525 -9 2 1589 324 321 52 7 chrX 131645837 131645972 -35004324 + B1_Mur1 SINE Alu 1 141 -8 2 1589 286 208 51 13 chrX 131648996 131649074 -35001222 + L1M4 LINE L1 5168 5248 -898 2 1589 790 274 59 98 chrX 131649089 131649195 -35001101 + RLTR28B LTR ERVL 4 89 -392 2 1589 1072 145 27 11 chrX 131649195 131649383 -35000913 - B2_Mm2 SINE B2 -1 194 4 2 1589 790 274 59 98 chrX 131649383 131649734 -35000562 + RLTR28B LTR ERVL 90 443 -38 2 1589 297 215 53 7 chrX 131649967 131650058 -35000238 + L1M4 LINE L1 5300 5391 -789 2 1589 463 283 0 0 chrX 131650201 131650360 -34999936 + GA-rich Low_complexity Low_complexity 2 160 0 2 1589 416 239 9 14 chrX 131650558 131650676 -34999620 - B1_Mur2 SINE Alu -6 114 2 2 1589 315 364 20 13 chrX 131650818 131650993 -34999303 - B4A SINE B4 0 292 116 2 1589 2096 138 15 0 chrX 131651104 131651429 -34998867 + L1VL2 LINE L1 21 350 -5985 2 1589 354 314 0 0 chrX 131651429 131651531 -34998765 + RSINE1 SINE B4 35 136 -29 2 1589 309 89 0 0 chrX 131651621 131651666 -34998630 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 1589 247 266 98 29 chrX 131651717 131651833 -34998463 + MTD-int LTR MaLR 1071 1183 -75 2 1589 219 25 75 0 chrX 131651833 131651873 -34998423 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 1589 247 266 98 29 chrX 131651873 131651930 -34998366 + MTD-int LTR MaLR 1184 1255 -3 2 1589 1021 212 193 6 chrX 131651939 131652266 -34998030 + MTD LTR MaLR 9 396 -23 2 1589 515 369 43 18 chrX 131653327 131653603 -34996693 - B4A SINE B4 -8 284 2 2 1589 432 0 0 0 chrX 131653760 131653808 -34996488 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1589 620 145 0 8 chrX 131655150 131655268 -34995028 + CT-rich Low_complexity Low_complexity 4 120 0 2 1589 630 210 51 0 chrX 131655268 131655406 -34994890 - B1_Mur2 SINE Alu 0 149 5 2 1589 1208 104 16 0 chrX 131656009 131656192 -34994104 - B2_Mm1t SINE B2 -6 187 2 2 1589 282 160 0 0 chrX 131658595 131658645 -34991651 + (CAG)n Simple_repeat Simple_repeat 1 50 0 2 1589 1342 171 43 50 chrX 131659530 131659832 -34990464 + L1_Mur2 LINE L1 11 310 -6402 2 1589 1769 205 62 50 chrX 131660009 131660445 -34989851 + Lx2B LINE L1 6542 6982 -18 2 1589 413 332 104 44 chrX 131660463 131660662 -34989634 + L1M5 LINE L1 4671 4875 -1271 2 1589 641 245 93 39 chrX 131660662 131660866 -34989430 + B3 SINE B2 2 216 0 2 1589 413 332 104 44 chrX 131660866 131661079 -34989217 + L1M5 LINE L1 4876 5108 -1038 2 1589 460 101 66 22 chrX 131661226 131661317 -34988979 - L1Md_F2 LINE L1 -1 6581 6487 2 1589 19449 80 3 3 chrX 131661325 131663937 -34986359 - L1Md_F LINE L1 -279 5607 2997 2 1589 1720 186 79 6 chrX 131663927 131664270 -34986026 - L1Md_F LINE L1 -5883 736 383 2 1589 1214 130 31 0 chrX 131664367 131664590 -34985706 + RLTR11B LTR ERVK 224 453 0 2 1589 22739 119 19 3 chrX 131664639 131670645 -34979651 + L1_Mus3 LINE L1 544 6631 -7 2 1589 6658 128 26 13 chrX 131670783 131671867 -34978429 + Lx3B LINE L1 5873 6970 -3 2 1589 2058 182 98 59 chrX 131671944 131672516 -34977780 + Lx7 LINE L1 6907 7500 -196 2 1589 223 236 40 40 chrX 131672536 131672611 -34977685 + MER5B DNA MER1_type 89 163 -15 2 1589 501 227 51 28 chrX 131672761 131672938 -34977358 + Lx7 LINE L1 7516 7696 0 2 1589 214 306 0 65 chrX 131673466 131673517 -34976779 + B1F SINE Alu 3 51 -98 2 1589 1618 176 213 47 chrX 131673517 131673722 -34976574 + RLTR41 LTR ERV1 3 276 -170 2 1589 207 0 0 0 chrX 131673722 131673745 -34976551 + (TA)n Simple_repeat Simple_repeat 2 24 0 2 1589 435 38 0 0 chrX 131673745 131673797 -34976499 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1589 1618 176 213 47 chrX 131673797 131673971 -34976325 + RLTR41 LTR ERV1 277 445 -1 2 1589 214 306 0 65 chrX 131673971 131673996 -34976300 + B1F SINE Alu 52 74 -75 2 1589 585 318 20 22 chrX 131675290 131675717 -34974579 + MuRRS4-int LTR ERV1 1307 1664 -3399 2 1589 301 261 68 7 chrX 131676109 131676376 -34973920 + MuRRS4-int LTR ERV1 3160 3603 -4175 2 1589 910 291 55 57 chrX 131676467 131677184 -34973112 + MuRRS4-int LTR ERV1 2112 3158 -1905 2 1589 281 252 128 16 chrX 131677285 131677410 -34972886 + MURVY-int LTR ERV1 7238 7376 -76 2 1589 1938 205 76 21 chrX 131677533 131677956 -34972340 + RLTR41 LTR ERV1 1 446 0 2 1589 251 341 22 11 chrX 131677956 131678045 -34972251 + ID_B1 SINE B4 129 218 -6 2 1589 228 250 29 59 chrX 131678985 131679121 -34971175 - Lx8 LINE L1 0 7473 7342 2 1589 641 253 49 108 chrX 131679503 131679707 -34970589 + B3 SINE B2 1 192 -3 2 1589 323 265 67 54 chrX 131680172 131680395 -34969901 + L1MEg LINE L1 1197 1422 -4662 2 1589 377 335 84 38 chrX 131680662 131681009 -34969287 + L1M2 LINE L1 2131 2493 -3650 2 1589 1655 181 108 34 chrX 131681131 131681509 -34968787 + MTD LTR MaLR 1 406 -13 2 1589 288 300 86 40 chrX 131681509 131681787 -34968509 + L1M2 LINE L1 2643 2933 -3210 2 1589 448 332 46 0 chrX 131681796 131682013 -34968283 + Lx8 LINE L1 6310 6536 -937 2 1589 1611 197 35 37 chrX 131682034 131682409 -34967887 - ORR1D1 LTR MaLR 0 374 1 2 1589 1591 167 56 69 chrX 131682409 131682769 -34967527 - ORR1D1-int LTR MaLR 0 1370 1016 2 1589 410 261 82 34 chrX 131682804 131682951 -34967345 - ORR1D1-int LTR MaLR -553 817 664 2 1589 1405 184 71 73 chrX 131683129 131683510 -34966786 + ORR1C2 LTR MaLR 3 382 -2 2 1589 1614 217 96 3 chrX 131683510 131683885 -34966411 + ORR1C2-int LTR MaLR 3 412 -958 2 1589 746 311 126 35 chrX 131684044 131684990 -34965306 + L1M2 LINE L1 4700 5768 -532 2 1589 1215 43 0 0 chrX 131685088 131685229 -34965067 + B1_Mus2 SINE Alu 1 141 -6 2 1589 493 236 49 43 chrX 131685602 131685766 -34964530 + Lx8 LINE L1 7297 7461 -12 2 1589 22 0 0 0 chrX 131685774 131685796 -34964500 + AT_rich Low_complexity Low_complexity 1 22 0 2 1589 22 35 0 0 chrX 131686469 131686498 -34963798 + AT_rich Low_complexity Low_complexity 1 29 0 2 1589 202 0 0 83 chrX 131686606 131686642 -34963654 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 2 1589 256 234 63 25 chrX 131686643 131686722 -34963574 - PB1D9 SINE Alu -1 119 38 2 1589 1143 61 7 0 chrX 131687431 131687578 -34962718 + B1_Mus1 SINE Alu 1 148 0 2 1589 288 348 9 35 chrX 131687659 131687775 -34962521 + B3 SINE B2 101 213 -3 2 1589 255 226 0 0 chrX 131687906 131687968 -34962328 - L1MC LINE L1 -2372 3774 3713 2 1589 337 331 79 40 chrX 131687990 131688298 -34961998 - L1MCc LINE L1 -2451 4490 4170 2 1589 309 214 151 23 chrX 131688403 131688575 -34961721 + L1MB4 LINE L1 5282 5475 -696 2 1589 420 248 0 0 chrX 131688657 131688778 -34961518 + Lx9 LINE L1 7502 7622 -22 2 1589 463 332 56 33 chrX 131688819 131689370 -34960926 + L1MB4 LINE L1 5617 6180 0 2 1589 792 125 0 0 chrX 131690527 131690687 -34959609 + (TC)n Simple_repeat Simple_repeat 1 160 0 2 1589 369 0 0 0 chrX 131690687 131690728 -34959568 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1589 303 359 147 52 chrX 131691060 131691172 -34959124 - L1MCc LINE L1 -5977 446 336 2 1589 315 0 0 0 chrX 131691172 131691207 -34959089 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1589 303 359 147 52 chrX 131691207 131691420 -34958876 - L1MCc LINE L1 -6088 335 90 2 1589 483 333 31 25 chrX 131691571 131691731 -34958565 - RSINE1 SINE B4 0 165 5 2 1589 3586 83 2 0 chrX 131691782 131692254 -34958042 + L1_Mus1 LINE L1 6094 6566 -1 2 1589 371 300 7 67 chrX 131692285 131692435 -34957861 + Lx8 LINE L1 6553 6693 -780 2 1589 3851 158 58 54 chrX 131692470 131692599 -34957697 + RMER12 LTR ERVK 59 172 -1150 2 1589 2305 150 0 3 chrX 131692599 131692974 -34957322 + Lx3_Mus LINE L1 6636 7009 0 2 1589 3851 158 58 54 chrX 131692974 131693567 -34956729 + RMER12 LTR ERVK 173 768 -554 2 1589 396 40 0 0 chrX 131693567 131693617 -34956679 + (TCCA)n Simple_repeat Simple_repeat 1 50 0 2 1589 3851 158 58 54 chrX 131693617 131693740 -34956556 + RMER12 LTR ERVK 769 908 -414 2 1589 328 198 207 25 chrX 131693855 131693989 -34956307 - RLTR9E LTR ERVK -262 147 1 2 1589 263 330 66 30 chrX 131694486 131694683 -34955613 + RMER15 LTR ERVL 370 573 -2 2 1589 694 89 0 0 chrX 131694797 131694891 -34955405 + Lx5 LINE L1 5494 5589 -297 2 1589 8007 49 7 0 chrX 131694891 131695879 -34954417 + L1Md_F2 LINE L1 5588 6582 0 2 1589 557 195 0 17 chrX 131695879 131695899 -34954397 + Lx5 LINE L1 5590 5609 -277 2 1589 1725 250 157 10 chrX 131695939 131696514 -34953782 + Lx6 LINE L1 6772 7430 -30 2 1589 1039 190 53 4 chrX 131697691 131697918 -34952378 + RLTR42-int LTR ERVK 4002 4239 -1283 2 1589 550 193 10 0 chrX 131698002 131698124 -34952172 + Lx5 LINE L1 5643 5766 -1242 2 1589 303 83 0 0 chrX 131698267 131698315 -34951981 - MT2A LTR ERVL 0 533 486 2 1589 237 33 0 0 chrX 131698319 131698349 -34951947 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 1589 213 139 0 0 chrX 131698348 131698391 -34951905 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1589 413 146 29 35 chrX 131698390 131698561 -34951735 + CT-rich Low_complexity Low_complexity 2 171 0 2 1589 522 139 0 0 chrX 131698576 131698662 -34951634 + (TATG)n Simple_repeat Simple_repeat 3 88 0 2 1589 1593 252 73 17 chrX 131698662 131699126 -34951170 + Lx6 LINE L1 6970 7459 -1 2 1589 351 0 0 0 chrX 131699138 131699177 -34951119 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1589 477 154 0 0 chrX 131699657 131699748 -34950548 + (CA)n Simple_repeat Simple_repeat 2 92 0 2 1589 858 310 19 19 chrX 131699901 131700164 -34950132 + B4A SINE B4 2 264 -28 2 1589 423 0 0 0 chrX 131700190 131700237 -34950059 + (CATA)n Simple_repeat Simple_repeat 1 47 0 2 1589 2198 233 43 182 chrX 131700829 131702014 -34948282 + RMER1B Other Other 44 1063 -3 2 1589 282 152 0 0 chrX 131705897 131705956 -34944340 + A-rich Low_complexity Low_complexity 2 60 0 2 1589 551 229 76 0 chrX 131706683 131706801 -34943495 - B3 SINE B2 -88 128 2 2 1589 21 36 0 0 chrX 131706898 131706926 -34943370 + AT_rich Low_complexity Low_complexity 1 28 0 2 1589 512 111 11 0 chrX 131708370 131708460 -34941836 + (CA)n Simple_repeat Simple_repeat 2 92 0 2 1589 516 100 0 0 chrX 131708460 131708540 -34941756 + (GA)n Simple_repeat Simple_repeat 1 80 0 2 1589 3169 126 29 8 chrX 131708753 131709266 -34941030 - Lx3_Mus LINE L1 -1 7008 6485 2 1589 21 0 0 0 chrX 131709986 131710007 -34940289 + AT_rich Low_complexity Low_complexity 1 21 0 2 1589 426 292 97 52 chrX 131710406 131711477 -34938819 + L1_Mur2 LINE L1 3873 4999 -881 2 1589 225 0 0 0 chrX 131711620 131711645 -34938651 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 2 1589 501 115 0 63 chrX 131712712 131712823 -34937473 - L1_Mus3 LINE L1 -6 6632 6529 2 1589 495 261 8 0 chrX 131713023 131713142 -34937154 + ORR1D-int LTR MaLR 147 266 -1104 2 1589 439 221 23 47 chrX 131713129 131713257 -34937039 + ORR1D-int LTR MaLR 1145 1269 -101 2 1589 3697 110 0 5 chrX 131713277 131713852 -34936444 - L1_Mus4 LINE L1 -179 6457 5886 2 1589 262 273 16 0 chrX 131713889 131714010 -34936286 - L1_Mur3 LINE L1 -4321 1559 1437 3 1589 306 0 0 0 chrX 131714053 131714087 -34936209 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1589 390 21 0 0 chrX 131714172 131714219 -34936077 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1589 506 263 98 15 chrX 131714715 131714939 -34935357 - ORR1D2 LTR MaLR 0 374 108 3 1589 911 231 83 57 chrX 131714939 131715303 -34934993 + RLTR20C LTR ERVK 1 479 -99 3 1589 396 0 0 0 chrX 131715303 131715347 -34934949 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1589 434 216 147 0 chrX 131715347 131715401 -34934895 + RLTR20C LTR ERVK 480 545 -33 3 1589 362 267 57 45 chrX 131716293 131716450 -34933846 + Lx9 LINE L1 7051 7209 -435 3 1589 505 181 0 68 chrX 131717104 131717294 -34933002 + (TG)n Simple_repeat Simple_repeat 1 177 0 3 1589 365 304 16 57 chrX 131717296 131717418 -34932878 - PB1D10 SINE Alu 0 117 1 3 1589 439 196 7 33 chrX 131717556 131717785 -34932511 + CT-rich Low_complexity Low_complexity 1 223 0 3 1589 503 305 97 17 chrX 131717785 131718085 -34932211 - Lx8 LINE L1 -93 7380 7057 3 1589 447 171 0 0 chrX 131718179 131718284 -34932012 + GA-rich Low_complexity Low_complexity 1 105 0 3 1589 618 109 0 0 chrX 131718504 131718596 -34931700 + (TA)n Simple_repeat Simple_repeat 2 93 0 3 1589 1140 267 71 8 chrX 131718665 131719043 -34931253 + MTD LTR MaLR 18 419 0 3 1589 584 208 8 31 chrX 131719344 131719497 -34930799 + ORR1B1 LTR MaLR 69 225 -159 3 1589 766 249 22 16 chrX 131719713 131719897 -34930399 - B3 SINE B2 -6 210 26 3 1589 407 279 16 16 chrX 131720351 131720475 -34929821 + RSINE1 SINE B4 2 125 -40 3 1589 1064 264 79 26 chrX 131720548 131720890 -34929406 + MTD LTR MaLR 9 368 -51 3 1589 468 0 0 0 chrX 131721112 131721164 -34929132 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1589 594 264 78 15 chrX 131722473 131722677 -34927619 + RMER5 LTR ERV1 3 219 -315 3 1589 900 235 9 23 chrX 131722674 131722892 -34927404 + RMER5 LTR ERV1 166 380 -154 3 1589 488 168 5 53 chrX 131722897 131723086 -34927210 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1589 458 273 24 16 chrX 131723093 131723216 -34927080 + RMER5 LTR ERV1 395 518 -16 3 1589 477 294 36 22 chrX 131723647 131723786 -34926510 + B1_Mur1 SINE Alu 1 141 -8 3 1589 893 261 65 107 chrX 131727033 131727143 -34923153 + RLTR28B LTR ERVL 4 89 -392 3 1589 1107 161 16 5 chrX 131727143 131727330 -34922966 - B2_Mm2 SINE B2 -3 192 4 3 198 893 261 65 107 chrX 131727330 131727678 -34922618 + RLTR28B LTR ERVL 90 443 -38 3 1590 346 249 131 9 chrX 131727911 131728056 -34922240 + L1MA9 LINE L1 5300 5458 -716 3 1590 661 263 68 48 chrX 131728155 131728447 -34921849 + L1MA9 LINE L1 6014 6311 -1 3 1590 231 36 0 0 chrX 131728749 131728777 -34921519 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 3 1590 983 136 92 38 chrX 131728779 131728963 -34921333 - B2_Mm2 SINE B2 0 195 2 3 1590 1119 88 0 0 chrX 131729011 131729159 -34921137 - B2_Mm2 SINE B2 -47 148 1 3 1590 2439 60 0 0 chrX 131729619 131729918 -34920378 - L1Md_F3 LINE L1 -559 6025 5727 3 1590 4851 36 4 5 chrX 131729918 131730469 -34919827 + L1Md_F3 LINE L1 6035 6584 0 3 1590 342 115 0 0 chrX 131731148 131731200 -34919096 + (TTTA)n Simple_repeat Simple_repeat 3 54 0 3 1590 518 259 9 0 chrX 131731289 131731401 -34918895 - B1_Mur1 SINE Alu -32 117 5 3 1590 369 0 0 0 chrX 131731470 131731511 -34918785 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 1590 363 23 0 0 chrX 131731511 131731554 -34918742 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1590 848 314 16 8 chrX 131731579 131731829 -34918467 - B4A SINE B4 -16 276 25 3 1590 322 247 0 0 chrX 131732085 131732170 -34918126 + GA-rich Low_complexity Low_complexity 1 85 0 3 1590 219 269 24 71 chrX 131732272 131732356 -34917940 - PB1D10 SINE Alu -2 115 36 3 1590 44 35 0 0 chrX 131732806 131732864 -34917432 + AT_rich Low_complexity Low_complexity 1 58 0 3 1590 5762 84 11 73 chrX 131732951 131733808 -34916488 - RLTR13B4 LTR ERVK 0 803 1 3 1590 795 259 81 36 chrX 131733981 131734229 -34916067 + RMER20B LTR ERVK 234 492 -135 3 1590 317 338 139 25 chrX 131734489 131734726 -34915570 - HERV16-int LTR ERVL -2160 2836 2573 3 1590 22 56 0 0 chrX 131735663 131735699 -34914597 + AT_rich Low_complexity Low_complexity 1 36 0 3 1590 287 216 0 0 chrX 131735724 131735775 -34914521 - RSINE1 SINE B4 -38 127 77 3 1590 3046 81 39 0 chrX 131736267 131736649 -34913647 - MTB LTR MaLR 0 400 4 3 1590 333 0 0 0 chrX 131736864 131736901 -34913395 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1590 459 0 0 0 chrX 131737181 131737232 -34913064 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 3 1590 909 28 0 0 chrX 131740128 131740236 -34910060 + (CA)n Simple_repeat Simple_repeat 2 109 0 3 1590 695 106 9 0 chrX 131740271 131740384 -34909912 + Lx9 LINE L1 7530 7643 -1 3 1590 340 247 38 123 chrX 131741776 131741882 -34908414 - MER5A1 DNA MER1_type -50 116 20 3 1590 1245 75 0 0 chrX 131742516 131742663 -34907633 - B1_Mm SINE Alu 0 147 1 3 1590 561 256 51 0 chrX 131746047 131746164 -34904132 - B1_Mur1 SINE Alu -1 148 26 3 1590 642 296 68 5 chrX 131746180 131746387 -34903909 - Lx8 LINE L1 -450 7023 6804 3 1590 873 37 0 0 chrX 131746386 131746493 -34903803 + L1_Mm LINE L1 3940 4046 -1837 3 1590 989 259 67 33 chrX 131746484 131746783 -34903513 - Lx8 LINE L1 -666 6807 6499 3 1590 32292 104 36 8 chrX 131747209 131753426 -34896870 - L1Md_F2 LINE L1 -5 6577 177 3 1590 258 95 0 0 chrX 131753622 131753664 -34896632 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1590 1682 302 57 43 chrX 131753667 131754175 -34896121 - Lx9 LINE L1 -190 7454 6950 3 1590 4124 71 0 0 chrX 131754175 131754667 -34895629 + L1_Mus1 LINE L1 6076 6567 0 3 1590 1682 302 57 43 chrX 131754667 131754901 -34895395 - Lx9 LINE L1 -695 6949 6702 3 1590 24 53 0 0 chrX 131754922 131754960 -34895336 + AT_rich Low_complexity Low_complexity 1 38 0 3 1590 286 276 40 51 chrX 131755123 131755299 -34894997 + L1MB3 LINE L1 5931 6104 -79 3 1590 32972 97 12 11 chrX 131755291 131761494 -34888802 - L1Md_F2 LINE L1 -9 6573 372 3 1590 384 342 14 72 chrX 131761781 131761939 -34888357 - MLT1B LTR MaLR -5 385 237 3 1590 441 255 9 52 chrX 131761939 131762055 -34888241 - PB1D9 SINE Alu -8 112 2 3 1590 384 342 14 72 chrX 131762055 131762104 -34888192 - MLT1B LTR MaLR -154 236 190 3 1590 3331 49 26 0 chrX 131762677 131763063 -34887233 - MTA_Mm LTR MaLR 0 396 1 3 1590 8654 73 17 2 chrX 131763063 131764145 -34886151 - MTA_Mm-int LTR MaLR 0 1098 1 3 1590 2011 50 11 0 chrX 131764145 131764405 -34885891 - MTA_Mm LTR MaLR 0 396 134 3 1590 10721 88 7 0 chrX 131764405 131765870 -34884426 - L1Md_F LINE L1 -2013 3870 2396 3 1590 5347 121 20 3 chrX 131765858 131767458 -34882838 - L1Md_F LINE L1 -3890 1993 366 3 1590 733 250 6 6 chrX 131767525 131767682 -34882614 + MTD LTR MaLR 261 417 -2 3 1590 192 40 0 0 chrX 131767928 131767953 -34882343 + (TAAAA)n Simple_repeat Simple_repeat 5 29 0 3 1590 392 242 57 36 chrX 131768290 131768553 -34881743 + L1M4c LINE L1 2786 3051 -3794 3 1590 843 191 105 16 chrX 131768789 131768980 -34881316 + MTD LTR MaLR 204 411 -8 3 1590 526 307 24 0 chrX 131769098 131769225 -34881071 - B3 SINE B2 -5 211 82 3 1590 2129 283 60 14 chrX 131769385 131770037 -34880259 + Lx8 LINE L1 6203 6884 -589 3 1590 955 52 7 0 chrX 131770038 131770173 -34880123 - L1Md_F2 LINE L1 0 6582 6447 3 1590 700 285 78 8 chrX 131770174 131770429 -34879867 + Lx8 LINE L1 6880 7152 -321 3 1590 329 174 14 0 chrX 131770545 131770614 -34879682 + GA-rich Low_complexity Low_complexity 2 71 0 3 1590 369 280 140 0 chrX 131772948 131773041 -34877255 + RSINE1 SINE B4 34 139 -26 3 1590 336 24 0 0 chrX 131773041 131773082 -34877214 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1590 586 301 7 0 chrX 131773804 131773950 -34876346 + B1F2 SINE Alu 2 148 -1 3 1590 2385 201 36 7 chrX 131774246 131774692 -34875604 - Lx5 LINE L1 -3 7047 6589 3 1590 603 196 0 0 chrX 131775442 131775549 -34874747 + Lx5 LINE L1 6477 6583 -467 3 1590 24 32 0 0 chrX 131775904 131775935 -34874361 + AT_rich Low_complexity Low_complexity 1 31 0 3 1590 1235 248 58 38 chrX 131775947 131776312 -34873984 + MTE2a LTR MaLR 1 372 -7 3 1590 4217 224 80 14 chrX 131776555 131777508 -34872788 - RMER1A Other Other -14 1016 1 3 1590 1408 271 53 21 chrX 131777523 131777742 -34872554 - RMER1A Other Other -579 451 234 3 1590 419 0 20 0 chrX 131777742 131777793 -34872503 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 1590 1302 280 41 56 chrX 131777793 131778176 -34872120 - RMER1A Other Other -551 515 3 3 1590 433 181 0 0 chrX 131778851 131778923 -34871373 - RMER1B Other Other -886 180 109 3 1590 544 105 13 0 chrX 131778930 131779006 -34871290 - B1_Mur4 SINE Alu -11 139 63 3 1590 26 30 0 0 chrX 131779239 131779272 -34871024 + AT_rich Low_complexity Low_complexity 1 33 0 3 1590 271 240 0 13 chrX 131779313 131779340 -34870956 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 1590 790 170 35 7 chrX 131779340 131779482 -34870814 - B1_Mus1 SINE Alu -1 147 2 3 1590 271 240 0 13 chrX 131779482 131779530 -34870766 + (TA)n Simple_repeat Simple_repeat 1 48 0 3 1590 247 352 68 40 chrX 131780358 131780387 -34869909 - ID_B1 SINE B4 -1 223 121 3 1590 326 380 0 9 chrX 131780387 131780496 -34869800 - B1F2 SINE Alu -41 108 1 3 1590 247 352 68 40 chrX 131780496 131780507 -34869789 - ID_B1 SINE B4 -1 120 74 3 1590 468 0 0 0 chrX 131780873 131780925 -34869371 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1590 7160 55 5 5 chrX 131780925 131782131 -34868165 - L1Md_F2 LINE L1 -23 6559 5355 3 1590 338 363 59 59 chrX 131782528 131782818 -34867478 - MLT1E3 LTR MaLR -2 622 333 3 1590 38 51 0 0 chrX 131782972 131783031 -34867265 + AT_rich Low_complexity Low_complexity 1 59 0 3 1590 26 30 0 0 chrX 131783106 131783139 -34867157 + AT_rich Low_complexity Low_complexity 1 33 0 3 1590 252 274 65 0 chrX 131783494 131783556 -34866740 + ID4_ SINE ID 1 66 -17 3 1590 222 258 0 75 chrX 131783523 131783590 -34866706 + BC1_Mm scRNA scRNA 34 95 -57 3 1590 1614 200 22 39 chrX 131783720 131784079 -34866217 - ORR1B1-int LTR MaLR -978 531 179 3 1590 6051 238 38 35 chrX 131784079 131785674 -34864622 + Lx6 LINE L1 5859 7459 -1 3 1590 306 352 97 22 chrX 131785679 131785946 -34864350 + L1MEg LINE L1 964 1250 -4992 3 1590 878 291 119 22 chrX 131785950 131786867 -34863429 + L1MEg LINE L1 4167 5156 -990 3 1590 405 0 0 0 chrX 131786867 131786912 -34863384 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1590 878 291 119 22 chrX 131786912 131786972 -34863324 + L1MEg LINE L1 5157 5238 -908 3 1590 470 279 178 21 chrX 131787077 131787319 -34862977 + Lx8 LINE L1 7164 7443 -30 4 1590 24 0 0 0 chrX 131787334 131787358 -34862938 + AT_rich Low_complexity Low_complexity 1 24 0 4 1590 843 10 0 0 chrX 131787524 131787620 -34862676 + (TC)n Simple_repeat Simple_repeat 2 97 0 4 1590 207 0 0 0 chrX 131787620 131787642 -34862654 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1590 227 377 0 0 chrX 131787642 131787711 -34862585 - ID4_ SINE ID -11 72 4 4 1590 309 345 26 34 chrX 131787733 131787850 -34862446 - B1F SINE Alu -13 136 21 4 1590 253 379 0 0 chrX 131787758 131787861 -34862435 - ID_B1 SINE B4 -31 193 91 4 1590 234 297 133 51 chrX 131787925 131788030 -34862266 + Charlie2a DNA MER1_type 1467 1569 -1292 4 1590 918 189 146 202 chrX 131788030 131788593 -34861703 - MT2A LTR ERVL 0 533 3 4 1590 234 297 133 51 chrX 131788593 131788682 -34861614 + Charlie2a DNA MER1_type 1570 1677 -1184 4 1590 216 0 0 0 chrX 131788758 131788782 -34861514 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1590 340 20 41 0 chrX 131788966 131789015 -34861281 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 4 1590 1070 159 41 0 chrX 131789150 131789345 -34860951 + RLTR14 LTR ERV1 24 226 -156 4 1590 364 185 0 0 chrX 131789380 131789445 -34860851 + RLTR19C LTR ERVK 33 97 -409 4 1590 509 222 47 147 chrX 131789709 131789941 -34860355 + RLTR33 LTR ERVK 448 656 -22 4 1590 255 314 0 14 chrX 131789989 131790060 -34860236 - MTC-int LTR MaLR -711 547 478 4 1590 1248 172 11 8 chrX 131790063 131790327 -34859969 - RLTR19-int LTR ERVK -4970 1167 903 4 1590 763 139 38 89 chrX 131790354 131790567 -34859729 - Lx3_Mus LINE L1 -1 7008 6807 4 1590 429 100 0 0 chrX 131790830 131790900 -34859396 - RLTR19-int LTR ERVK -5224 913 844 4 1590 1310 226 96 33 chrX 131790908 131791305 -34858991 - RLTR19-int LTR ERVK -5530 607 186 4 1590 433 161 0 11 chrX 131791315 131791409 -34858887 + RLTR19-int LTR ERVK 1257 1349 -4788 4 1590 29 70 0 0 chrX 131791457 131791514 -34858782 + AT_rich Low_complexity Low_complexity 1 57 0 4 1590 314 216 40 13 chrX 131791788 131791863 -34858433 + URR1B DNA MER1_type 149 225 0 4 1590 624 264 39 50 chrX 131792038 131792317 -34857979 + RLTR19-int LTR ERVK 2220 2495 -3642 4 1590 1119 66 0 0 chrX 131792468 131792605 -34857691 + B1_Mus2 SINE Alu 2 138 -9 4 1590 638 227 23 0 chrX 131792629 131792757 -34857539 + RLTR14 LTR ERV1 252 382 0 4 1590 1470 255 39 0 chrX 131792757 131793081 -34857215 + RLTR14 LTR ERV1 43 379 -3 4 1590 290 224 68 147 chrX 131793081 131793168 -34857128 + B1_Mur2 SINE Alu 29 107 -43 4 1590 1222 104 49 0 chrX 131793374 131793557 -34856739 - B2_Mm1t SINE B2 0 193 2 4 1590 352 271 38 62 chrX 131793709 131793862 -34856434 + B3A SINE B2 5 148 -68 4 1590 211 359 32 32 chrX 131794381 131794476 -34855820 + PB1D7 SINE Alu 11 105 -15 4 1590 198 0 0 0 chrX 131794476 131794498 -34855798 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 4 1590 458 112 11 0 chrX 131794762 131794851 -34855445 - Lx2 LINE L1 -11 6986 6897 4 1590 724 354 82 48 chrX 131795061 131795559 -34854737 - LTR53 LTR ERVL -4 515 1 4 1590 367 304 164 11 chrX 131795575 131795928 -34854368 - L1MC4 LINE L1 -653 7389 6983 4 1590 217 222 22 0 chrX 131795957 131796002 -34854294 + CT-rich Low_complexity Low_complexity 4 49 0 4 1590 1005 114 14 0 chrX 131796004 131796144 -34854152 - B1_Mur4 SINE Alu -7 143 2 4 1590 362 284 140 28 chrX 131796182 131796396 -34853900 - L1MC4 LINE L1 -1002 6880 6643 4 1590 432 104 0 0 chrX 131796403 131796470 -34853826 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 1590 597 114 0 0 chrX 131796470 131796575 -34853721 + (GA)n Simple_repeat Simple_repeat 1 105 0 4 1590 366 328 97 45 chrX 131796791 131797375 -34852921 - L1MC4 LINE L1 -986 5225 4617 4 1590 1063 65 7 0 chrX 131797395 131797533 -34852763 - B1_Mus2 SINE Alu 0 147 9 4 1590 536 254 39 78 chrX 131797397 131797551 -34852745 - B4 SINE B4 -69 223 76 4 1590 243 222 83 0 chrX 131798071 131798143 -34852153 - MLT1A0 LTR MaLR 0 365 288 4 1590 492 18 0 0 chrX 131798452 131798509 -34851787 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 4 1590 374 0 22 0 chrX 131798609 131798655 -34851641 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1590 531 45 0 0 chrX 131798655 131798720 -34851576 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 1590 4756 127 154 2 chrX 131798721 131799341 -34850955 - L1_Mus4 LINE L1 -22 6614 5860 4 1590 447 19 0 0 chrX 131799341 131799393 -34850903 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 1590 26492 142 19 8 chrX 131799393 131804814 -34845482 - L1_Mus4 LINE L1 -777 5859 409 4 1590 333 271 31 43 chrX 131805017 131805179 -34845117 - L1MC4 LINE L1 -6014 201 42 4 1590 2114 224 70 84 chrX 131805848 131806575 -34843721 - Lx7 LINE L1 0 7696 6980 4 1590 517 80 11 11 chrX 131810690 131810779 -34839517 + (CA)n Simple_repeat Simple_repeat 2 90 0 4 1590 27 0 0 0 chrX 131810802 131810829 -34839467 + AT_rich Low_complexity Low_complexity 1 27 0 4 1590 28 29 0 0 chrX 131811152 131811187 -34839109 + AT_rich Low_complexity Low_complexity 1 35 0 4 1590 226 175 88 0 chrX 131811192 131811249 -34839047 + Lx2B LINE L1 6931 6992 -8 4 1590 6439 77 23 11 chrX 131811438 131812309 -34837987 + Lx3_Mus LINE L1 6109 6991 -18 4 1590 189 0 0 0 chrX 131812309 131812330 -34837966 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 4 1590 6439 77 23 11 chrX 131812330 131812343 -34837953 + Lx3_Mus LINE L1 6992 7003 -6 4 1590 408 156 0 15 chrX 131812482 131812547 -34837749 - RLTR14 LTR ERV1 -2 380 317 4 1590 1413 164 81 7 chrX 131812973 131813244 -34837052 - RLTR14 LTR ERV1 -89 293 3 4 1590 8004 175 80 32 chrX 131813265 131815101 -34835195 - RLTR14-int LTR ERV1 -1 5316 3393 4 1590 598 301 70 0 chrX 131815111 131815297 -34834999 + RLTR26 LTR ERVK 444 642 0 4 1590 1060 249 0 24 chrX 131815297 131815548 -34834748 - RLTR14-int LTR ERV1 -2866 2451 2207 4 1590 3711 133 34 7 chrX 131815549 131816119 -34834177 + L1_Mur2 LINE L1 680 1258 -5828 4 1590 351 0 0 0 chrX 131816119 131816158 -34834138 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1590 3711 129 33 13 chrX 131816158 131816793 -34833503 + L1_Mur2 LINE L1 1259 1906 -3971 4 1590 580 132 5 1 chrX 131816795 131816917 -34833379 + L1_Mur2 LINE L1 1843 1966 -3920 4 1590 7884 144 35 5 chrX 131816924 131818676 -34831620 + Lx4A LINE L1 5248 7058 0 4 1590 835 186 12 6 chrX 131818703 131818871 -34831425 - RLTR14-int LTR ERV1 -3115 2202 2034 4 1590 1611 177 13 13 chrX 131818953 131819257 -34831039 - RLTR14-int LTR ERV1 -3268 2049 1746 4 1590 1634 219 16 19 chrX 131819340 131819708 -34830588 - RLTR14-int LTR ERV1 -3588 1729 1363 4 1590 2446 179 154 17 chrX 131819708 131820292 -34830004 + RMER19B LTR ERVK 226 889 -13 4 1590 23 0 0 0 chrX 131820334 131820357 -34829939 + AT_rich Low_complexity Low_complexity 1 23 0 4 1590 5678 146 33 2 chrX 131820357 131821437 -34828859 + L1VL1 LINE L1 1 949 -5473 4 1590 2504 91 5 0 chrX 131821452 131821836 -34828460 + MusHAL1 LINE L1 1020 1405 -1307 4 1590 987 144 0 0 chrX 131821840 131822007 -34828289 + (TA)n Simple_repeat Simple_repeat 1 167 0 4 1590 6922 112 3 76 chrX 131822020 131823028 -34827268 + L1_Mus3 LINE L1 2288 3288 -2595 4 1590 3910 81 0 4 chrX 131823028 131823538 -34826758 + L1_Mus1 LINE L1 6060 6567 0 4 1590 6922 112 3 76 chrX 131823538 131823823 -34826473 + L1_Mus3 LINE L1 3289 3487 -2396 4 1590 5519 105 9 12 chrX 131823813 131824122 -34826174 + L1_Mus3 LINE L1 4989 5295 -588 4 1590 6383 33 4 0 chrX 131824122 131824874 -34825422 + L1Md_F2 LINE L1 5827 6581 -1 4 1590 6295 112 20 7 chrX 131824874 131826190 -34824106 + L1_Mus3 LINE L1 5296 6636 -2 4 1590 25 51 0 0 chrX 131826190 131826229 -34824067 + AT_rich Low_complexity Low_complexity 1 39 0 4 1590 2013 165 45 6 chrX 131826230 131826584 -34823712 + ORR1C1 LTR MaLR 1 368 -10 4 1590 8217 166 26 12 chrX 131826588 131828640 -34821656 + Lx3C LINE L1 4177 6253 -723 4 1590 487 196 129 35 chrX 131828963 131829031 -34821265 - RLTR20C LTR ERVK -21 557 481 4 1590 657 36 0 0 chrX 131829031 131829115 -34821181 + (CA)n Simple_repeat Simple_repeat 2 85 0 4 1590 909 217 107 65 chrX 131829115 131829469 -34820827 - RLTR20C LTR ERVK -98 480 1 4 1590 650 331 60 16 chrX 131829469 131829720 -34820576 + ORR1D2 LTR MaLR 109 370 0 4 1590 477 0 0 0 chrX 131830204 131830257 -34820039 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1590 249 273 16 0 chrX 131830405 131830526 -34819770 + L1_Mur3 LINE L1 1437 1559 -4321 4 1590 3872 101 0 0 chrX 131830563 131831135 -34819161 + L1_Mus4 LINE L1 5886 6457 -179 4 1590 539 170 16 21 chrX 131831150 131831281 -34819015 - ORR1D-int LTR MaLR -101 1269 1145 4 1590 410 288 17 0 chrX 131831268 131831386 -34818910 - ORR1D-int LTR MaLR -1104 266 147 4 1590 433 119 48 29 chrX 131831596 131831700 -34818596 + L1_Mus3 LINE L1 6533 6638 0 4 1590 30757 29 0 0 chrX 131831739 131836346 -34813950 - L1Md_T LINE L1 0 6582 1976 4 1590 284 0 28 0 chrX 131837371 131837407 -34812889 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 4 1590 380 283 119 46 chrX 131837546 131838070 -34812226 - L1_Mur2 LINE L1 -881 4999 4442 4 1590 2210 44 4 0 chrX 131838086 131838360 -34811936 - L1Md_T LINE L1 0 6582 6308 4 1590 230 311 64 32 chrX 131838617 131838836 -34811460 - L1M2 LINE L1 -1941 4202 3977 4 1590 21 0 0 0 chrX 131839292 131839313 -34810983 + AT_rich Low_complexity Low_complexity 1 21 0 4 1590 3266 118 29 8 chrX 131840031 131840544 -34809752 + Lx3_Mus LINE L1 6485 7008 -1 4 1590 663 99 0 0 chrX 131840757 131840858 -34809438 + (TC)n Simple_repeat Simple_repeat 2 102 0 4 1590 915 63 0 0 chrX 131840863 131840990 -34809306 + (TG)n Simple_repeat Simple_repeat 2 128 0 4 1590 555 229 76 0 chrX 131842559 131842677 -34807619 + B3 SINE B2 2 128 -88 4 1590 296 94 19 0 chrX 131843404 131843457 -34806839 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 4 1590 2338 225 43 182 chrX 131847339 131848524 -34801772 - RMER1B Other Other -3 1063 44 4 1590 420 55 0 0 chrX 131849117 131849172 -34801124 + (TATG)n Simple_repeat Simple_repeat 1 55 0 4 1590 850 310 19 11 chrX 131849202 131849463 -34800833 - B4A SINE B4 -28 264 2 4 1590 636 77 0 0 chrX 131849617 131849708 -34800588 + (TG)n Simple_repeat Simple_repeat 2 92 0 4 1590 441 0 0 0 chrX 131850187 131850236 -34800060 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1590 1543 261 73 15 chrX 131850248 131850711 -34799585 - Lx6 LINE L1 -1 7459 6970 4 1590 714 34 0 0 chrX 131850712 131850801 -34799495 + (CA)n Simple_repeat Simple_repeat 2 90 0 4 1590 243 61 0 0 chrX 131850810 131850843 -34799453 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 1590 287 87 0 0 chrX 131850847 131850893 -34799403 + MT2A LTR ERVL 486 531 -2 4 1590 553 203 12 0 chrX 131851036 131851177 -34799119 - Lx5 LINE L1 -493 5798 5621 4 1590 998 187 57 9 chrX 131851242 131851469 -34798827 - RLTR42-int LTR ERVK -1283 4239 4002 4 1590 1638 258 157 10 chrX 131852641 131853216 -34797080 - Lx6 LINE L1 -30 7430 6772 4 1590 216 171 0 0 chrX 131853227 131853268 -34797028 + (TGG)n Simple_repeat Simple_repeat 1 41 0 4 1590 489 62 50 0 chrX 131853269 131853349 -34796947 - L1Md_F2 LINE L1 0 6582 6499 4 1590 1348 53 0 0 chrX 131853355 131853525 -34796771 - L1Md_F2 LINE L1 -190 6392 6223 4 1590 1369 67 0 0 chrX 131853524 131853704 -34796592 + L1Md_F2 LINE L1 6047 6226 -356 4 1590 2200 123 55 0 chrX 131853700 131854097 -34796199 - L1_Mur2 LINE L1 -3549 2328 1910 4 1590 1093 123 29 0 chrX 131854097 131854267 -34796029 + RLTR9C LTR ERVK 1 175 -218 5 1590 1853 82 0 14 chrX 131854267 131854664 -34795632 - L1_Mur2 LINE L1 -4449 1428 1037 4 1590 810 296 59 16 chrX 131854665 131854919 -34795377 - MYSERV6-int LTR ERVK -4566 1984 1720 5 1590 1119 129 0 0 chrX 131855073 131855251 -34795045 + (TCTCC)n Simple_repeat Simple_repeat 1 178 0 5 1590 231 114 0 0 chrX 131855252 131855287 -34795009 + (TCCCC)n Simple_repeat Simple_repeat 4 38 0 5 1590 372 43 0 0 chrX 131855381 131855427 -34794869 + (TTCTC)n Simple_repeat Simple_repeat 3 48 0 5 1590 1262 78 0 11 chrX 131855427 131855608 -34794688 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 5 1590 1870 321 17 19 chrX 131855760 131856743 -34793553 - MYSERV6-int LTR ERVK -7663 1296 200 5 1590 4435 196 89 45 chrX 131857468 131857894 -34792402 - RMER12 LTR ERVK -61 1261 770 5 1590 384 59 0 0 chrX 131857894 131857945 -34792351 + (TGGA)n Simple_repeat Simple_repeat 1 51 0 5 198 4435 196 89 45 chrX 131857945 131858540 -34791756 - RMER12 LTR ERVK -553 769 172 5 1591 2324 144 0 3 chrX 131858540 131858915 -34791381 - Lx3_Mus LINE L1 0 7009 6636 5 1591 4435 196 89 45 chrX 131858915 131859044 -34791252 - RMER12 LTR ERVK -1151 171 59 5 1591 388 261 8 48 chrX 131859079 131859204 -34791092 - Lx8 LINE L1 -780 6693 6574 5 1591 3473 89 4 0 chrX 131859256 131859727 -34790569 - L1_Mus1 LINE L1 -1 6566 6094 5 1591 453 346 31 25 chrX 131859778 131859938 -34790358 + RSINE1 SINE B4 5 165 0 5 1591 331 375 128 45 chrX 131860089 131860304 -34789992 + L1MCc LINE L1 90 335 -6088 5 1591 444 19 0 0 chrX 131860304 131860357 -34789939 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1591 331 375 128 45 chrX 131860357 131860515 -34789781 + L1MCc LINE L1 336 494 -5929 5 1591 423 0 0 0 chrX 131860802 131860849 -34789447 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1591 480 18 0 0 chrX 131860849 131860905 -34789391 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 1591 27 0 0 0 chrX 131861373 131861400 -34788896 + AT_rich Low_complexity Low_complexity 1 27 0 5 1591 455 337 54 40 chrX 131862059 131862615 -34787681 - L1MB4 LINE L1 0 6180 5617 5 1591 436 240 0 0 chrX 131862656 131862777 -34787519 - Lx9 LINE L1 -22 7622 7502 5 1591 276 230 129 20 chrX 131862859 131863048 -34787248 - L1MB4 LINE L1 -708 5475 5265 5 1591 192 77 0 0 chrX 131863432 131863458 -34786838 + (A)n Simple_repeat Simple_repeat 1 26 0 5 1591 255 226 0 0 chrX 131863466 131863528 -34786768 + L1MC LINE L1 3713 3774 -2372 5 1591 288 348 9 35 chrX 131863659 131863775 -34786521 - B3 SINE B2 -3 213 101 5 1591 1153 54 7 0 chrX 131863856 131864003 -34786293 - B1_Mus1 SINE Alu 0 148 1 5 1591 256 234 63 25 chrX 131864713 131864792 -34785504 + PB1D9 SINE Alu 38 119 -1 5 1591 197 0 0 67 chrX 131864800 131864830 -34785466 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1591 25 0 0 0 chrX 131865292 131865317 -34784979 + AT_rich Low_complexity Low_complexity 1 25 0 5 1591 455 244 44 67 chrX 131865667 131865847 -34784449 - Lx8 LINE L1 -1 7472 7297 5 1591 1158 57 0 0 chrX 131866215 131866356 -34783940 - B1_Mus2 SINE Alu -6 141 1 5 1591 634 317 133 27 chrX 131866367 131867400 -34782896 - L1M2 LINE L1 -449 5854 4700 5 1591 1491 223 101 8 chrX 131867559 131867934 -34782362 - ORR1C2-int LTR MaLR -958 412 3 5 1591 1329 201 68 71 chrX 131867934 131868315 -34781981 - ORR1C2 LTR MaLR -2 382 3 5 1591 406 271 66 66 chrX 131868493 131868659 -34781637 + ORR1D1-int LTR MaLR 664 829 -541 5 1591 1558 173 49 105 chrX 131868626 131869034 -34781262 + ORR1D1-int LTR MaLR 986 1370 0 5 1591 1567 199 35 37 chrX 131869034 131869409 -34780887 + ORR1D1 LTR MaLR 1 374 0 5 1591 429 305 80 9 chrX 131869430 131869642 -34780654 - Lx8 LINE L1 -937 6536 6310 5 1591 228 305 90 43 chrX 131869651 131869929 -34780367 - L1M2 LINE L1 -3210 2933 2643 5 1591 1672 178 108 34 chrX 131869929 131870307 -34779989 - MTD LTR MaLR -13 406 1 5 1591 377 335 84 38 chrX 131870429 131870776 -34779520 - L1M2 LINE L1 -3650 2493 2131 5 1591 654 276 27 46 chrX 131871732 131871938 -34778358 - B3 SINE B2 -3 192 1 5 1591 228 250 29 59 chrX 131872323 131872459 -34777837 + Lx8 LINE L1 7342 7473 0 5 1591 251 341 22 11 chrX 131873399 131873488 -34776808 - ID_B1 SINE B4 -6 218 129 5 1591 1928 205 76 21 chrX 131873488 131873911 -34776385 - RLTR41 LTR ERV1 0 446 1 5 1591 296 289 11 27 chrX 131873998 131874185 -34776111 - MuRRS4-int LTR ERV1 -93 7359 7238 5 1591 878 294 55 57 chrX 131874272 131874989 -34775307 - MuRRS4-int LTR ERV1 -1905 3158 2112 5 1591 301 276 73 7 chrX 131874988 131875348 -34774948 - MuRRS4-int LTR ERV1 -4204 3397 3160 5 1591 585 316 30 29 chrX 131875740 131876167 -34774129 - MuRRS4-int LTR ERV1 -3399 1664 1307 5 1591 261 319 54 54 chrX 131876719 131876885 -34773411 - MuRRS4-int LTR ERV1 -6794 762 597 5 1591 214 306 0 65 chrX 131877462 131877487 -34772809 - B1F SINE Alu -75 74 52 5 1591 1739 180 186 39 chrX 131877487 131877662 -34772634 - RLTR41 LTR ERV1 0 446 285 5 1591 408 20 0 0 chrX 131877662 131877711 -34772585 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1591 1739 180 186 39 chrX 131877711 131877922 -34772374 - RLTR41 LTR ERV1 -162 284 4 5 1591 214 306 0 65 chrX 131877922 131877973 -34772323 - B1F SINE Alu -98 51 3 5 1591 264 245 0 19 chrX 131877924 131877978 -34772318 - ID_B1 SINE B4 -92 132 80 5 1591 523 225 45 28 chrX 131878500 131878678 -34771618 - Lx7 LINE L1 0 7696 7516 5 1591 249 235 28 42 chrX 131878825 131878896 -34771400 - MER5B DNA MER1_type -12 166 97 5 1591 2051 179 100 60 chrX 131878923 131879494 -34770802 - Lx7 LINE L1 -196 7500 6907 5 1591 6404 138 29 13 chrX 131879571 131880651 -34769645 - Lx3B LINE L1 -4 6969 5873 5 1591 34 24 0 0 chrX 131880748 131880789 -34769507 + AT_rich Low_complexity Low_complexity 1 41 0 5 1591 5540 129 37 43 chrX 131880792 131882378 -34767918 - L1_Mus2 LINE L1 -1 6565 4989 5 1591 5553 110 10 8 chrX 131882378 131883200 -34767096 - L1Md_F2 LINE L1 -12 6570 5748 5 1591 1116 117 17 0 chrX 131884891 131885071 -34765225 + B2_Mm1t SINE B2 2 184 -9 5 1591 491 253 62 0 chrX 131885676 131885803 -34764493 + B1_Mur2 SINE Alu 5 138 -11 5 1591 785 56 0 9 chrX 131885803 131885911 -34764385 + (GAAA)n Simple_repeat Simple_repeat 2 108 0 5 1591 486 0 0 0 chrX 131887252 131887306 -34762990 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 1591 1109 220 192 6 chrX 131888778 131889112 -34761184 - MTD LTR MaLR -23 396 1 5 1591 282 197 295 13 chrX 131889114 131889174 -34761122 - MTD-int LTR MaLR -2 1256 1176 5 1591 463 31 31 0 chrX 131889174 131889239 -34761057 + (TA)n Simple_repeat Simple_repeat 1 67 0 5 1591 282 202 298 22 chrX 131889239 131889361 -34760935 - MTD-int LTR MaLR -83 1175 1066 5 1591 294 106 0 0 chrX 131889407 131889454 -34760842 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1591 405 310 0 0 chrX 131889544 131889644 -34760652 - RSINE1 SINE B4 -31 134 35 5 1591 1922 142 15 0 chrX 131889644 131889969 -34760327 - L1VL2 LINE L1 -5985 350 21 5 1591 418 361 30 20 chrX 131890057 131890255 -34760041 + B4A SINE B4 93 292 0 5 1591 458 239 9 14 chrX 131890397 131890515 -34759781 + B1_Mur2 SINE Alu 2 114 -6 5 1591 388 302 0 0 chrX 131890712 131890871 -34759425 + CT-rich Low_complexity Low_complexity 2 160 0 5 1591 266 87 22 0 chrX 131890987 131891033 -34759263 + (TTG)n Simple_repeat Simple_repeat 2 48 0 5 1591 408 296 55 30 chrX 131891454 131891725 -34758571 - L1MA9 LINE L1 -1 6311 6034 5 1591 300 246 127 19 chrX 131891813 131891993 -34758303 - L1MA9 LINE L1 -676 5495 5300 5 1591 845 253 73 76 chrX 131892226 131892581 -34757715 - RLTR28B LTR ERVL -38 443 90 5 1591 1110 110 29 6 chrX 131892581 131892755 -34757541 + B2_Mm2 SINE B2 4 181 -14 5 1591 262 227 124 11 chrX 131892787 131892876 -34757420 - RLTR28B LTR ERVL -379 102 4 5 1591 242 211 52 13 chrX 131892891 131892968 -34757328 - L1MA9 LINE L1 -898 5248 5169 5 1591 383 309 36 22 chrX 131896292 131896431 -34753865 - B1_Mur1 SINE Alu -8 141 1 5 1591 476 273 24 16 chrX 131896862 131896985 -34753311 - RMER5 LTR ERV1 -16 518 395 5 1591 524 134 0 82 chrX 131896992 131897187 -34753109 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 1591 875 245 14 19 chrX 131897193 131897409 -34752887 - RMER5 LTR ERV1 -154 380 166 5 1591 577 269 78 15 chrX 131897406 131897610 -34752686 - RMER5 LTR ERV1 -315 219 3 5 1591 324 48 0 0 chrX 131898919 131898961 -34751335 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1591 1081 265 82 29 chrX 131899206 131899548 -34750748 - MTD LTR MaLR -51 368 9 5 1591 418 287 16 16 chrX 131899621 131899745 -34750551 - RSINE1 SINE B4 -40 125 2 5 1591 781 243 22 16 chrX 131900199 131900383 -34749913 + B3 SINE B2 26 210 -6 5 1591 565 210 24 34 chrX 131900595 131900752 -34749544 - ORR1B1 LTR MaLR -122 237 69 5 1591 1110 272 71 8 chrX 131901053 131901431 -34748865 - MTD LTR MaLR 0 419 18 5 1591 243 0 0 0 chrX 131901511 131901538 -34748758 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1591 567 117 0 0 chrX 131901752 131901846 -34748450 + (TC)n Simple_repeat Simple_repeat 1 94 0 5 1591 442 310 72 38 chrX 131901940 131902198 -34748098 + Lx8 LINE L1 7057 7331 -142 5 1591 1163 88 6 0 chrX 131902198 131902368 -34747928 + (GAAA)n Simple_repeat Simple_repeat 4 174 0 5 1591 442 310 72 38 chrX 131902368 131902454 -34747842 + Lx8 LINE L1 7332 7412 -61 5 1591 207 275 0 28 chrX 131902454 131902525 -34747771 + GA-rich Low_complexity Low_complexity 4 72 0 5 1591 219 222 0 22 chrX 131902456 131902502 -34747794 + G-rich Low_complexity Low_complexity 2 46 0 5 1591 350 317 26 55 chrX 131902647 131902789 -34747507 + PB1D10 SINE Alu 1 148 -1 5 1591 320 223 21 7 chrX 131902830 131902970 -34747326 + (CA)n Simple_repeat Simple_repeat 2 143 0 5 1591 345 260 57 51 chrX 131903591 131903749 -34746547 - Lx9 LINE L1 -435 7209 7051 5 1591 445 214 129 35 chrX 131904626 131904694 -34745602 - RLTR20C LTR ERVK -21 557 481 5 1591 342 0 0 0 chrX 131904694 131904732 -34745564 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1591 861 232 103 61 chrX 131904732 131905086 -34745210 - RLTR20C LTR ERVK -98 480 1 5 1591 680 290 174 0 chrX 131905086 131905309 -34744987 + ORR1D2 LTR MaLR 109 370 0 5 1591 342 0 0 0 chrX 131905797 131905835 -34744461 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1591 3768 107 0 3 chrX 131906140 131906714 -34743582 + L1_Mus4 LINE L1 5886 6457 -179 5 1591 535 172 16 21 chrX 131906729 131906860 -34743436 - ORR1D-int LTR MaLR -101 1269 1145 5 1591 509 252 8 0 chrX 131906847 131906966 -34743330 - ORR1D-int LTR MaLR -1104 266 147 5 1591 519 106 0 63 chrX 131907166 131907277 -34743019 + L1_Mus3 LINE L1 6529 6632 -6 5 1591 261 0 0 0 chrX 131908343 131908372 -34741924 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 5 1591 475 297 93 48 chrX 131908515 131909586 -34740710 - L1_Mur2 LINE L1 -881 4999 3873 5 1591 21 0 0 0 chrX 131909981 131910002 -34740294 + AT_rich Low_complexity Low_complexity 1 21 0 5 1591 3347 114 29 0 chrX 131910723 131911233 -34739063 + Lx3_Mus LINE L1 6485 7009 0 5 1591 540 0 0 0 chrX 131911491 131911551 -34738745 + (TC)n Simple_repeat Simple_repeat 2 61 0 5 1591 294 29 0 0 chrX 131911551 131911585 -34738711 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1591 553 247 119 6 chrX 131913151 131913310 -34736986 + B3 SINE B2 2 178 -38 5 1591 282 152 0 0 chrX 131913996 131914055 -34736241 + T-rich Low_complexity Low_complexity 2 60 0 5 1591 2414 226 35 184 chrX 131917926 131919125 -34731171 - RMER1B Other Other -3 1063 44 5 1591 732 71 0 0 chrX 131919715 131919814 -34730482 + (TATG)n Simple_repeat Simple_repeat 1 99 0 6 1591 836 318 19 8 chrX 131919844 131920104 -34730192 - B4A SINE B4 -28 264 2 6 1591 420 82 0 0 chrX 131920259 131920320 -34729976 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 1591 453 36 0 0 chrX 131920799 131920854 -34729442 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1591 1524 257 76 17 chrX 131920864 131921327 -34728969 - Lx6 LINE L1 -1 7459 6970 6 1591 576 162 0 0 chrX 131921330 131921435 -34728861 + (CATA)n Simple_repeat Simple_repeat 4 108 0 6 1591 347 124 28 37 chrX 131921484 131921536 -34728760 + polypurine Low_complexity Low_complexity 1 51 0 6 1591 180 0 0 0 chrX 131921536 131921556 -34728740 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 1591 347 124 28 37 chrX 131921556 131921612 -34728684 + polypurine Low_complexity Low_complexity 52 108 0 6 1591 375 73 0 0 chrX 131921612 131921667 -34728629 + (TG)n Simple_repeat Simple_repeat 1 55 0 6 1591 305 24 24 0 chrX 131921669 131921711 -34728585 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1591 287 106 0 0 chrX 131921711 131921758 -34728538 + MT2A LTR ERVL 487 533 0 6 1591 528 206 10 0 chrX 131921901 131922023 -34728273 - Lx5 LINE L1 -391 5798 5643 6 1591 1096 177 53 4 chrX 131922107 131922334 -34727962 - RLTR42-int LTR ERVK -1283 4239 4002 6 1591 1640 257 157 10 chrX 131923508 131924083 -34726213 - Lx6 LINE L1 -30 7430 6772 6 1591 6918 58 17 0 chrX 131924147 131925075 -34725221 - L1Md_F2 LINE L1 -2 6580 5637 6 1591 609 128 0 0 chrX 131925131 131925256 -34725040 + (GA)n Simple_repeat Simple_repeat 2 126 0 6 1591 32 43 0 0 chrX 131925707 131925753 -34724543 + AT_rich Low_complexity Low_complexity 1 46 0 6 1591 365 307 71 43 chrX 131926420 131926984 -34723312 - L1MB3 LINE L1 -12 6171 5592 6 1591 353 221 48 16 chrX 131926996 131927120 -34723176 - Lx9 LINE L1 -22 7622 7495 6 1591 243 220 144 2 chrX 131927199 131927389 -34722907 - Lx5 LINE L1 -825 5475 5264 6 1591 250 196 0 0 chrX 131927803 131927859 -34722437 + L1MC LINE L1 3713 3768 -2378 6 1591 288 348 9 35 chrX 131927995 131928111 -34722185 - B3 SINE B2 -3 213 101 6 1591 1195 41 7 0 chrX 131928190 131928337 -34721959 - B1_Mus1 SINE Alu 0 148 1 6 1591 34086 48 0 3 chrX 131928632 131934293 -34716003 + L1Md_T LINE L1 1 5589 -297 6 1591 8483 32 0 0 chrX 131934293 131935289 -34715007 + L1Md_T LINE L1 5590 6585 0 6 1591 198 0 0 0 chrX 131935412 131935434 -34714862 + (TTTTC)n Simple_repeat Simple_repeat 3 24 0 6 1591 1053 84 21 0 chrX 131935435 131935578 -34714718 - B1_Mus2 SINE Alu -1 146 1 6 1591 31 0 0 0 chrX 131935603 131935634 -34714662 + AT_rich Low_complexity Low_complexity 1 31 0 6 1591 1245 188 69 31 chrX 131935955 131935998 -34714298 + RLTR1B LTR ERV1 135 176 -336 6 1591 1176 7 0 0 chrX 131935998 131936138 -34714158 + L1Md_A LINE L1 6443 6582 0 6 1591 1245 188 69 31 chrX 131936138 131936385 -34713911 + RLTR1B LTR ERV1 177 436 -76 6 1591 256 234 63 25 chrX 131936843 131936922 -34713374 + PB1D9 SINE Alu 38 119 -1 6 1591 276 148 0 0 chrX 131936923 131936984 -34713312 + (A)n Simple_repeat Simple_repeat 1 61 0 6 1591 25 0 0 0 chrX 131937447 131937472 -34712824 + AT_rich Low_complexity Low_complexity 1 25 0 6 1591 220 374 36 0 chrX 131937569 131937652 -34712644 - B4A SINE B4 -124 168 83 6 1591 23 0 0 0 chrX 131937798 131937821 -34712475 + AT_rich Low_complexity Low_complexity 1 23 0 6 1591 421 277 36 36 chrX 131937828 131937993 -34712303 - Lx8 LINE L1 -12 7461 7297 6 1591 1559 197 193 46 chrX 131938209 131938577 -34711719 - RLTR41 LTR ERV1 -24 422 1 6 1591 220 304 0 18 chrX 131938577 131938626 -34711670 - B1F SINE Alu -99 50 3 6 1591 555 214 45 28 chrX 131939133 131939311 -34710985 - Lx7 LINE L1 0 7696 7516 6 1591 246 200 29 44 chrX 131939461 131939529 -34710767 - MER5B DNA MER1_type -15 163 97 6 1591 238 193 38 108 chrX 131939556 131939742 -34710554 - Lx7 LINE L1 -196 7500 7328 6 1591 231 294 0 38 chrX 131939749 131939855 -34710441 + MER45R DNA Tip100 907 1008 -573 6 1591 1144 175 147 18 chrX 131939855 131940128 -34710168 - Lx7 LINE L1 -481 7215 6908 6 1591 6577 131 29 13 chrX 131940206 131941287 -34709009 - Lx3B LINE L1 -3 6970 5873 6 1591 34 24 0 0 chrX 131941379 131941420 -34708876 + AT_rich Low_complexity Low_complexity 1 41 0 6 1591 8074 113 68 75 chrX 131941425 131943684 -34706612 - L1_Mus2 LINE L1 -1 6565 4319 6 1591 1281 73 6 0 chrX 131943684 131943863 -34706433 + L1_Mm LINE L1 4575 4754 -1129 6 1591 1053 132 0 18 chrX 131943861 131944048 -34706248 - L1Md_F2 LINE L1 -665 5917 5699 6 1591 1171 111 17 0 chrX 131945726 131945907 -34704389 + B2_Mm1t SINE B2 2 185 -8 6 1591 611 209 54 0 chrX 131946512 131946641 -34703655 + B1_Mur2 SINE Alu 5 140 -9 6 1591 1034 136 0 11 chrX 131946641 131946820 -34703476 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 6 1591 651 60 0 0 chrX 131948185 131948269 -34702027 + (TA)n Simple_repeat Simple_repeat 2 85 0 6 1591 474 376 43 18 chrX 131948426 131948702 -34701594 + B4A SINE B4 2 284 -8 6 1591 252 338 39 84 chrX 131949523 131949678 -34700618 - LTR86A2 LTR ERVL -122 386 239 6 1591 1138 217 192 6 chrX 131949766 131950100 -34700196 - MTD LTR MaLR -23 396 1 6 1591 274 240 152 23 chrX 131950102 131950158 -34700138 - MTD-int LTR MaLR -2 1256 1186 6 1591 203 0 0 36 chrX 131950158 131950186 -34700110 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 1591 274 169 13 174 chrX 131950186 131950302 -34699994 - MTD-int LTR MaLR -73 1185 1004 6 1591 381 22 0 0 chrX 131950345 131950391 -34699905 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 1591 2008 128 15 0 chrX 131950581 131950908 -34699388 - L1VL2 LINE L1 -5983 352 21 6 1591 375 350 33 22 chrX 131951009 131951193 -34699103 + B4A SINE B4 107 292 0 6 1591 502 244 84 0 chrX 131951335 131951466 -34698830 + B1_Mur2 SINE Alu 2 143 -6 6 1591 474 271 0 22 chrX 131951663 131951844 -34698452 + CT-rich Low_complexity Low_complexity 2 178 0 6 1591 401 289 66 41 chrX 131952412 131952683 -34697613 - L1MA9 LINE L1 -1 6311 6034 6 1591 311 236 127 13 chrX 131952771 131952951 -34697345 - L1MA9 LINE L1 -685 5495 5300 6 1591 865 249 84 63 chrX 131953184 131953531 -34696765 - RLTR28B LTR ERVL -38 443 90 6 1591 1073 137 17 6 chrX 131953531 131953707 -34696589 + B2_Mm2 SINE B2 4 181 -14 6 1591 282 216 124 11 chrX 131953739 131953828 -34696468 - RLTR28B LTR ERVL -379 102 4 6 1591 251 208 51 13 chrX 131953843 131953921 -34696375 - L1MA9 LINE L1 -898 5248 5168 6 1591 398 301 36 22 chrX 131956817 131956956 -34693340 - B1_Mur1 SINE Alu -8 141 1 6 1591 476 273 24 16 chrX 131957387 131957510 -34692786 - RMER5 LTR ERV1 -16 518 395 6 1591 442 183 11 33 chrX 131957517 131957698 -34692598 + (TG)n Simple_repeat Simple_repeat 2 178 0 6 1591 864 250 14 19 chrX 131957704 131957920 -34692376 - RMER5 LTR ERV1 -154 380 166 6 1591 577 269 78 15 chrX 131957917 131958121 -34692175 - RMER5 LTR ERV1 -315 219 3 6 1591 522 31 0 0 chrX 131959430 131959494 -34690802 + (CA)n Simple_repeat Simple_repeat 1 64 0 6 1591 1103 262 82 29 chrX 131959739 131960081 -34690215 - MTD LTR MaLR -51 368 9 6 1591 418 287 16 16 chrX 131960154 131960278 -34690018 - RSINE1 SINE B4 -40 125 2 6 1591 781 243 22 16 chrX 131960732 131960916 -34689380 + B3 SINE B2 26 210 -6 6 1591 565 210 24 34 chrX 131961128 131961285 -34689011 - ORR1B1 LTR MaLR -122 237 69 6 1591 1110 272 71 8 chrX 131961586 131961964 -34688332 - MTD LTR MaLR 0 419 18 6 1591 215 231 15 0 chrX 131962033 131962046 -34688250 + (TA)n Simple_repeat Simple_repeat 1 13 0 6 1591 207 0 0 0 chrX 131962046 131962069 -34688227 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1591 215 231 15 0 chrX 131962069 131962120 -34688176 + (TA)n Simple_repeat Simple_repeat 1 52 0 6 1591 642 113 0 0 chrX 131962283 131962389 -34687907 + (TC)n Simple_repeat Simple_repeat 1 106 0 6 1591 442 310 72 38 chrX 131962483 131962741 -34687555 + Lx8 LINE L1 7057 7331 -142 6 1591 1166 92 6 0 chrX 131962741 131962915 -34687381 + (GAAA)n Simple_repeat Simple_repeat 4 178 0 6 1591 442 310 72 38 chrX 131962915 131963001 -34687295 + Lx8 LINE L1 7332 7412 -61 6 1591 207 275 0 28 chrX 131963001 131963072 -34687224 + GA-rich Low_complexity Low_complexity 4 72 0 6 1591 219 222 0 22 chrX 131963003 131963049 -34687247 + G-rich Low_complexity Low_complexity 2 46 0 6 1591 350 317 26 55 chrX 131963194 131963336 -34686960 + PB1D10 SINE Alu 1 148 -1 6 1591 302 226 22 7 chrX 131963377 131963515 -34686781 + (CA)n Simple_repeat Simple_repeat 2 141 0 6 1591 345 260 57 51 chrX 131964136 131964294 -34686002 - Lx9 LINE L1 -435 7209 7051 6 1591 445 214 129 35 chrX 131965171 131965239 -34685057 - RLTR20C LTR ERVK -21 557 481 6 1591 378 0 0 0 chrX 131965239 131965281 -34685015 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1591 861 232 103 61 chrX 131965281 131965635 -34684661 - RLTR20C LTR ERVK -98 480 1 6 1591 680 290 174 0 chrX 131965635 131965858 -34684438 + ORR1D2 LTR MaLR 109 370 0 6 1591 360 0 0 0 chrX 131966346 131966386 -34683910 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1591 3768 107 0 3 chrX 131966691 131967265 -34683031 + L1_Mus4 LINE L1 5886 6457 -179 6 1591 535 172 16 21 chrX 131967280 131967411 -34682885 - ORR1D-int LTR MaLR -101 1269 1145 6 1591 509 252 8 0 chrX 131967398 131967517 -34682779 - ORR1D-int LTR MaLR -1104 266 147 6 1591 519 106 0 63 chrX 131967717 131967828 -34682468 + L1_Mus3 LINE L1 6529 6632 -6 6 1591 261 0 0 0 chrX 131968894 131968923 -34681373 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 6 1591 499 295 93 48 chrX 131969067 131970138 -34680158 - L1_Mur2 LINE L1 -881 4999 3873 6 1591 21 0 0 0 chrX 131970533 131970554 -34679742 + AT_rich Low_complexity Low_complexity 1 21 0 6 1591 3347 114 29 0 chrX 131971275 131971785 -34678511 + Lx3_Mus LINE L1 6485 7009 0 6 1591 777 11 0 0 chrX 131972041 131972131 -34678165 + (TC)n Simple_repeat Simple_repeat 2 91 0 6 1591 510 17 0 0 chrX 131972131 131972189 -34678107 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1591 553 247 119 6 chrX 131973755 131973914 -34676382 + B3 SINE B2 2 178 -38 6 1591 282 152 0 0 chrX 131974600 131974659 -34675637 + T-rich Low_complexity Low_complexity 2 60 0 6 1591 2414 226 35 184 chrX 131978530 131979729 -34670567 - RMER1B Other Other -3 1063 44 6 1591 681 66 0 0 chrX 131980319 131980410 -34669886 + (TATG)n Simple_repeat Simple_repeat 1 91 0 6 1591 836 318 19 8 chrX 131980440 131980700 -34669596 - B4A SINE B4 -28 264 2 6 1591 420 82 0 0 chrX 131980855 131980916 -34669380 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 1591 489 34 0 0 chrX 131981395 131981454 -34668842 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1591 1524 257 76 17 chrX 131981464 131981927 -34668369 - Lx6 LINE L1 -1 7459 6970 7 1591 561 158 0 0 chrX 131981930 131982031 -34668265 + (CATA)n Simple_repeat Simple_repeat 4 104 0 7 1591 347 124 28 37 chrX 131982080 131982132 -34668164 + polypurine Low_complexity Low_complexity 1 51 0 7 1591 180 0 0 0 chrX 131982132 131982152 -34668144 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 1591 347 124 28 37 chrX 131982152 131982208 -34668088 + polypurine Low_complexity Low_complexity 52 108 0 7 1591 411 68 0 0 chrX 131982208 131982267 -34668029 + (TG)n Simple_repeat Simple_repeat 1 59 0 7 1591 305 24 24 0 chrX 131982269 131982311 -34667985 + (GA)n Simple_repeat Simple_repeat 2 44 0 7 1591 287 106 0 0 chrX 131982311 131982358 -34667938 + MT2A LTR ERVL 487 533 0 7 1591 528 206 10 0 chrX 131982501 131982623 -34667673 - Lx5 LINE L1 -391 5798 5643 7 1591 1096 177 53 4 chrX 131982707 131982934 -34667362 - RLTR42-int LTR ERVK -1283 4239 4002 7 1591 1640 257 157 10 chrX 131984108 131984683 -34665613 - Lx6 LINE L1 -30 7430 6772 7 1591 6918 58 17 0 chrX 131984747 131985675 -34664621 - L1Md_F2 LINE L1 -2 6580 5637 7 1591 591 130 0 0 chrX 131985731 131985854 -34664442 + (GA)n Simple_repeat Simple_repeat 2 124 0 7 1591 32 43 0 0 chrX 131986305 131986351 -34663945 + AT_rich Low_complexity Low_complexity 1 46 0 7 1591 359 280 82 41 chrX 131987018 131987335 -34662961 - L1MB3 LINE L1 -12 6171 5842 7 1591 353 221 48 16 chrX 131987595 131987719 -34662577 - Lx9 LINE L1 -22 7622 7495 7 1591 243 220 144 2 chrX 131987798 131987988 -34662308 - L1MB3 LINE L1 -825 5475 5264 7 1591 250 196 0 0 chrX 131988402 131988458 -34661838 + L1MC LINE L1 3713 3768 -2378 7 1591 288 348 9 35 chrX 131988594 131988710 -34661586 - B3 SINE B2 -3 213 101 7 1591 1195 41 7 0 chrX 131988789 131988936 -34661360 - B1_Mus1 SINE Alu 0 148 1 7 198 34086 48 0 3 chrX 131989231 131994892 -34655404 + L1Md_T LINE L1 1 5589 -297 7 1592 8483 32 0 0 chrX 131994892 131995888 -34654408 + L1Md_T LINE L1 5590 6585 0 7 1592 198 0 0 0 chrX 131996011 131996033 -34654263 + (TTTTC)n Simple_repeat Simple_repeat 3 24 0 7 1592 1053 84 21 0 chrX 131996034 131996177 -34654119 - B1_Mus2 SINE Alu -1 146 1 7 1592 31 0 0 0 chrX 131996202 131996233 -34654063 + AT_rich Low_complexity Low_complexity 1 31 0 7 1592 1245 188 69 31 chrX 131996554 131996597 -34653699 + RLTR1B LTR ERV1 135 176 -336 7 1592 1176 7 0 0 chrX 131996597 131996737 -34653559 + L1Md_A LINE L1 6443 6582 0 7 1592 1245 188 69 31 chrX 131996737 131996984 -34653312 + RLTR1B LTR ERV1 177 436 -76 7 1592 256 234 63 25 chrX 131997442 131997521 -34652775 + PB1D9 SINE Alu 38 119 -1 7 1592 276 148 0 0 chrX 131997522 131997583 -34652713 + (A)n Simple_repeat Simple_repeat 1 61 0 7 1592 25 0 0 0 chrX 131998046 131998071 -34652225 + AT_rich Low_complexity Low_complexity 1 25 0 7 1592 220 374 36 0 chrX 131998168 131998251 -34652045 - B4A SINE B4 -124 168 83 7 1592 23 0 0 0 chrX 131998397 131998420 -34651876 + AT_rich Low_complexity Low_complexity 1 23 0 7 1592 421 277 36 36 chrX 131998427 131998592 -34651704 - Lx8 LINE L1 -12 7461 7297 7 1592 1559 197 193 46 chrX 131998808 131999176 -34651120 - RLTR41 LTR ERV1 -24 422 1 7 1592 220 304 0 18 chrX 131999176 131999225 -34651071 - B1F SINE Alu -99 50 3 7 1592 555 214 45 28 chrX 131999732 131999910 -34650386 - Lx7 LINE L1 0 7696 7516 7 1592 246 208 40 40 chrX 132000060 132000135 -34650161 - MER5B DNA MER1_type -15 163 89 1 1592 238 193 38 108 chrX 132000155 132000341 -34649955 - Lx7 LINE L1 -196 7500 7328 2 1592 231 294 0 38 chrX 132000348 132000454 -34649842 + MER45R DNA Tip100 907 1008 -573 3 1592 1144 175 147 18 chrX 132000454 132000727 -34649569 - Lx7 LINE L1 -481 7215 6908 2 1592 6577 131 29 13 chrX 132000805 132001886 -34648410 - Lx3B LINE L1 -3 6970 5873 4 1592 34 24 0 0 chrX 132001978 132002019 -34648277 + AT_rich Low_complexity Low_complexity 1 41 0 5 1592 8074 113 68 75 chrX 132002024 132004283 -34646013 - L1_Mus2 LINE L1 -1 6565 4319 6 1592 1281 73 6 0 chrX 132004283 132004462 -34645834 + L1_Mm LINE L1 4575 4754 -1129 7 1592 1053 132 0 18 chrX 132004460 132004647 -34645649 - L1Md_F2 LINE L1 -665 5917 5699 8 1592 1171 111 17 0 chrX 132006325 132006506 -34643790 + B2_Mm1t SINE B2 2 185 -8 9 1592 635 204 53 0 chrX 132007111 132007243 -34643053 + B1_Mur2 SINE Alu 5 143 -6 1 1592 937 139 0 17 chrX 132007243 132007418 -34642878 + GA-rich Low_complexity Low_complexity 1 172 0 1 1592 633 61 0 0 chrX 132008760 132008842 -34641454 + (TA)n Simple_repeat Simple_repeat 2 83 0 1 1592 474 376 43 18 chrX 132008999 132009275 -34641021 + B4A SINE B4 2 284 -8 1 1592 252 338 39 84 chrX 132010099 132010254 -34640042 - LTR86A2 LTR ERVL -122 386 239 1 1592 1138 217 192 6 chrX 132010342 132010676 -34639620 - MTD LTR MaLR -23 396 1 1 1592 274 240 152 23 chrX 132010678 132010734 -34639562 - MTD-int LTR MaLR -2 1256 1186 1 1592 203 0 0 36 chrX 132010734 132010762 -34639534 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 1592 274 169 13 174 chrX 132010762 132010878 -34639418 - MTD-int LTR MaLR -73 1185 1004 1 1592 453 19 0 0 chrX 132010921 132010975 -34639321 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1592 2008 128 15 0 chrX 132011165 132011492 -34638804 - L1VL2 LINE L1 -5983 352 21 1 1592 375 350 33 22 chrX 132011593 132011777 -34638519 + B4A SINE B4 107 292 0 1 1592 502 244 84 0 chrX 132011919 132012050 -34638246 + B1_Mur2 SINE Alu 2 143 -6 2 1592 474 271 0 22 chrX 132012247 132012428 -34637868 + CT-rich Low_complexity Low_complexity 2 178 0 2 1592 401 289 66 41 chrX 132012996 132013267 -34637029 - L1MA9 LINE L1 -1 6311 6034 2 1592 311 236 127 13 chrX 132013355 132013535 -34636761 - L1MA9 LINE L1 -685 5495 5300 2 1592 865 249 84 63 chrX 132013768 132014115 -34636181 - RLTR28B LTR ERVL -38 443 90 2 1592 1073 137 17 6 chrX 132014115 132014291 -34636005 + B2_Mm2 SINE B2 4 181 -14 2 1592 282 216 124 11 chrX 132014323 132014412 -34635884 - RLTR28B LTR ERVL -379 102 4 2 1592 251 208 51 13 chrX 132014427 132014505 -34635791 - L1MA9 LINE L1 -898 5248 5168 2 1592 428 294 36 22 chrX 132017530 132017669 -34632627 - B1_Mur1 SINE Alu -8 141 1 2 1592 462 273 24 16 chrX 132018100 132018223 -34632073 - RMER5 LTR ERV1 -16 518 395 2 1592 464 190 5 32 chrX 132018230 132018415 -34631881 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1592 901 235 9 27 chrX 132018420 132018639 -34631657 - RMER5 LTR ERV1 -154 380 166 2 1592 594 264 78 15 chrX 132018636 132018840 -34631456 - RMER5 LTR ERV1 -315 219 3 2 1592 414 0 0 0 chrX 132020149 132020195 -34630101 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1592 1064 264 79 26 chrX 132020417 132020759 -34629537 - MTD LTR MaLR -51 368 9 3 1592 407 279 16 16 chrX 132020832 132020956 -34629340 - RSINE1 SINE B4 -40 125 2 3 1592 766 249 22 16 chrX 132021410 132021594 -34628702 + B3 SINE B2 26 210 -6 3 1592 584 208 8 31 chrX 132021810 132021963 -34628333 - ORR1B1 LTR MaLR -159 225 69 3 1592 1140 267 71 8 chrX 132022264 132022642 -34627654 - MTD LTR MaLR 0 419 18 3 1592 621 100 0 0 chrX 132022711 132022801 -34627495 + (TA)n Simple_repeat Simple_repeat 2 91 0 3 1592 450 165 0 0 chrX 132023019 132023122 -34627174 + CT-rich Low_complexity Low_complexity 1 103 0 3 1592 503 305 97 17 chrX 132023216 132023516 -34626780 + Lx8 LINE L1 7057 7380 -93 3 1592 439 196 7 33 chrX 132023516 132023745 -34626551 + GA-rich Low_complexity Low_complexity 1 223 0 3 1592 365 304 16 57 chrX 132023883 132024005 -34626291 + PB1D10 SINE Alu 1 117 0 3 1592 523 179 0 68 chrX 132024007 132024199 -34626097 + (CA)n Simple_repeat Simple_repeat 1 179 0 4 1592 363 267 57 45 chrX 132024853 132025010 -34625286 - Lx9 LINE L1 -435 7209 7051 4 1592 434 216 147 0 chrX 132025902 132025956 -34624340 - RLTR20C LTR ERVK -31 547 492 4 1592 414 0 0 0 chrX 132025956 132026002 -34624294 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1592 920 241 73 63 chrX 132026002 132026366 -34623930 - RLTR20C LTR ERVK -87 491 1 4 1592 506 263 98 15 chrX 132026366 132026590 -34623706 + ORR1D2 LTR MaLR 108 374 0 4 1592 318 26 0 0 chrX 132027086 132027125 -34623171 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1592 306 0 0 0 chrX 132027210 132027244 -34623052 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1592 262 273 16 0 chrX 132027287 132027408 -34622888 + L1_Mur3 LINE L1 1437 1559 -4321 4 1592 3726 108 0 5 chrX 132027445 132028020 -34622276 + L1_Mus4 LINE L1 5886 6457 -179 4 1592 444 221 24 39 chrX 132028040 132028167 -34622129 - ORR1D-int LTR MaLR -101 1269 1145 4 1592 481 269 8 0 chrX 132028154 132028273 -34622023 - ORR1D-int LTR MaLR -1104 266 147 4 1592 501 115 0 63 chrX 132028473 132028584 -34621712 + L1_Mus3 LINE L1 6529 6632 -6 5 1592 261 0 0 0 chrX 132029652 132029681 -34620615 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 5 1592 420 294 98 49 chrX 132029824 132030895 -34619401 - L1_Mur2 LINE L1 -881 4999 3873 5 1592 21 0 0 0 chrX 132031294 132031315 -34618981 + AT_rich Low_complexity Low_complexity 1 21 0 5 1592 3169 126 29 8 chrX 132032034 132032547 -34617749 + Lx3_Mus LINE L1 6485 7008 -1 5 1592 426 114 0 0 chrX 132032760 132032830 -34617466 + (TC)n Simple_repeat Simple_repeat 1 70 0 5 1592 548 106 11 0 chrX 132032830 132032924 -34617372 + (TG)n Simple_repeat Simple_repeat 2 96 0 5 1592 21 36 0 0 chrX 132034369 132034397 -34615899 + AT_rich Low_complexity Low_complexity 1 28 0 5 1592 551 229 76 0 chrX 132034494 132034612 -34615684 + B3 SINE B2 2 128 -88 5 1592 282 152 0 0 chrX 132035339 132035398 -34614898 + T-rich Low_complexity Low_complexity 2 60 0 5 1592 2220 232 43 182 chrX 132039281 132040466 -34609830 - RMER1B Other Other -3 1063 44 6 1592 351 0 0 0 chrX 132041058 132041097 -34609199 + (TATG)n Simple_repeat Simple_repeat 1 39 0 6 1592 863 310 19 15 chrX 132041123 132041385 -34608911 - B4A SINE B4 -28 264 2 6 1592 477 154 0 0 chrX 132041538 132041629 -34608667 + (TG)n Simple_repeat Simple_repeat 2 92 0 6 1592 351 0 0 0 chrX 132042109 132042148 -34608148 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1592 1593 253 69 13 chrX 132042160 132042624 -34607672 - Lx6 LINE L1 -1 7459 6970 6 1592 558 133 0 0 chrX 132042624 132042714 -34607582 + (CATA)n Simple_repeat Simple_repeat 3 92 0 6 1592 398 150 29 35 chrX 132042729 132042902 -34607394 + GA-rich Low_complexity Low_complexity 2 173 0 6 1592 213 139 0 0 chrX 132042901 132042944 -34607352 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1592 219 36 0 0 chrX 132042943 132042971 -34607325 + (GA)n Simple_repeat Simple_repeat 1 28 0 6 1592 303 83 0 0 chrX 132042975 132043023 -34607273 + MT2A LTR ERVL 486 533 0 7 1592 550 193 10 0 chrX 132043166 132043288 -34607008 - Lx5 LINE L1 -1242 5766 5643 7 1592 1039 190 53 4 chrX 132043372 132043599 -34606697 - RLTR42-int LTR ERVK -1283 4239 4002 7 1592 1725 250 157 10 chrX 132044777 132045352 -34604944 - Lx6 LINE L1 -30 7430 6772 7 1592 214 158 0 0 chrX 132045363 132045401 -34604895 + (TGG)n Simple_repeat Simple_repeat 1 38 0 7 1592 7661 50 7 0 chrX 132045412 132046494 -34603802 - L1Md_F2 LINE L1 0 6582 5494 7 1592 263 330 66 30 chrX 132046608 132046805 -34603491 - RMER15 LTR ERVL -2 573 370 7 1592 328 198 207 25 chrX 132047302 132047436 -34602860 + RLTR9E LTR ERVK 1 147 -262 7 1592 3835 160 58 54 chrX 132047551 132047674 -34602622 - RMER12 LTR ERVK -414 908 769 7 1592 504 32 0 0 chrX 132047674 132047736 -34602560 + (TGGA)n Simple_repeat Simple_repeat 1 62 0 7 1592 3835 160 58 54 chrX 132047736 132048329 -34601967 - RMER12 LTR ERVK -554 768 173 7 1592 2305 150 0 3 chrX 132048329 132048704 -34601592 - Lx3_Mus LINE L1 0 7009 6636 8 1592 3835 160 58 54 chrX 132048704 132048833 -34601463 - RMER12 LTR ERVK -1150 172 59 7 1592 371 300 7 67 chrX 132048868 132049018 -34601278 - Lx8 LINE L1 -780 6693 6553 8 1592 3586 83 2 0 chrX 132049049 132049521 -34600775 - L1_Mus1 LINE L1 -1 6566 6094 8 1592 483 333 31 25 chrX 132049572 132049732 -34600564 + RSINE1 SINE B4 5 165 0 8 1592 303 359 147 52 chrX 132049883 132050096 -34600200 + L1MCc LINE L1 90 335 -6088 8 1592 315 0 0 0 chrX 132050096 132050131 -34600165 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 1592 303 359 147 52 chrX 132050131 132050243 -34600053 + L1MCc LINE L1 336 446 -5977 8 1592 369 0 0 0 chrX 132050575 132050616 -34599680 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 1592 600 129 0 0 chrX 132050616 132050740 -34599556 + (GA)n Simple_repeat Simple_repeat 1 124 0 8 1592 475 332 57 29 chrX 132051897 132052446 -34597850 - L1MB4 LINE L1 0 6180 5617 8 1592 420 248 0 0 chrX 132052487 132052608 -34597688 - Lx9 LINE L1 -22 7622 7502 8 1592 309 214 151 23 chrX 132052690 132052862 -34597434 - L1MB4 LINE L1 -696 5475 5282 8 1592 337 331 79 40 chrX 132052967 132053275 -34597021 + L1MCc LINE L1 4170 4490 -2451 8 1592 255 226 0 0 chrX 132053297 132053359 -34596937 + L1MC LINE L1 3713 3774 -2372 9 1592 279 357 9 35 chrX 132053490 132053606 -34596690 - B3 SINE B2 -3 213 101 9 1592 1143 61 7 0 chrX 132053687 132053834 -34596462 - B1_Mus1 SINE Alu 0 148 1 9 1592 256 234 63 25 chrX 132054542 132054621 -34595675 + PB1D9 SINE Alu 38 119 -1 9 1592 202 0 0 83 chrX 132054622 132054658 -34595638 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 9 1592 201 94 0 0 chrX 132054764 132054796 -34595500 + (T)n Simple_repeat Simple_repeat 1 32 0 9 1592 22 0 0 0 chrX 132055469 132055491 -34594805 + AT_rich Low_complexity Low_complexity 1 22 0 9 1592 493 236 49 43 chrX 132055499 132055663 -34594633 - Lx8 LINE L1 -12 7461 7297 9 1592 1215 43 0 0 chrX 132056036 132056177 -34594119 - B1_Mus2 SINE Alu -6 141 1 9 1592 931 308 134 45 chrX 132056179 132057223 -34593073 - L1M2 LINE L1 -52 6497 5377 9 1592 252 254 14 0 chrX 132057307 132057378 -34592918 + L1M2 LINE L1 4717 4788 -1355 1 1592 1597 217 96 3 chrX 132057380 132057755 -34592541 - ORR1C2-int LTR MaLR -958 412 3 1 1592 1536 184 71 76 chrX 132057755 132058137 -34592159 - ORR1C2 LTR MaLR -2 382 3 1 1592 403 261 82 34 chrX 132058315 132058462 -34591834 + ORR1D1-int LTR MaLR 664 817 -553 1 1592 1573 157 57 71 chrX 132058507 132058857 -34591439 + ORR1D1-int LTR MaLR 1026 1370 0 1 1592 1767 197 35 37 chrX 132058857 132059232 -34591064 + ORR1D1 LTR MaLR 1 374 0 1 1592 513 332 46 0 chrX 132059253 132059470 -34590826 - Lx8 LINE L1 -937 6536 6310 1 1592 390 300 86 40 chrX 132059479 132059757 -34590539 - L1M2 LINE L1 -3210 3635 3345 9 1592 1672 178 108 34 chrX 132059757 132060135 -34590161 - MTD LTR MaLR -13 406 1 1 1592 360 339 74 27 chrX 132060257 132060515 -34589781 - L1M2 LINE L1 -3650 3195 2926 9 1592 267 291 79 41 chrX 132060804 132061094 -34589202 - L1M2 LINE L1 -4238 2611 2311 9 1592 649 243 16 65 chrX 132061559 132061763 -34588533 - B3 SINE B2 -3 192 1 1 1592 278 250 29 59 chrX 132062145 132062281 -34588015 + Lx8 LINE L1 7342 7473 0 1 1592 244 341 22 11 chrX 132063221 132063310 -34586986 - ID_B1 SINE B4 -6 218 129 1 1592 2116 207 73 19 chrX 132063310 132063733 -34586563 - RLTR41 LTR ERV1 0 446 1 1 1592 335 261 121 17 chrX 132063822 132063981 -34586315 - RLTR4_MM-int LTR ERV1 -78 7528 7238 1 1592 1154 300 60 46 chrX 132064082 132064783 -34585513 - MuRRS4-int LTR ERV1 -1905 3158 2448 1 1592 342 263 70 7 chrX 132064890 132065157 -34585139 - RLTR4_MM-int LTR ERV1 -4204 3397 3160 1 1592 685 327 21 21 chrX 132065549 132065980 -34584316 - MuRRS4-int LTR ERV1 -3399 1664 1234 1 1592 305 338 45 44 chrX 132066452 132066692 -34583604 - MuRRS4-int LTR ERV1 -6802 804 580 1 1592 216 306 0 65 chrX 132067270 132067295 -34583001 - B1F SINE Alu -75 74 52 1 1592 1777 176 213 47 chrX 132067295 132067469 -34582827 - RLTR41 LTR ERV1 0 446 277 1 1592 381 43 0 0 chrX 132067469 132067516 -34582780 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1592 297 0 0 0 chrX 132067516 132067548 -34582748 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 1592 1777 176 213 47 chrX 132067548 132067753 -34582543 - RLTR41 LTR ERV1 -170 276 4 1 1592 216 306 0 65 chrX 132067753 132067804 -34582492 - B1F SINE Alu -98 51 3 1 1592 265 245 0 19 chrX 132067755 132067809 -34582487 - ID_B1 SINE B4 -92 132 80 1 1592 572 227 51 28 chrX 132068333 132068510 -34581786 - Lx7 LINE L1 0 7696 7516 1 1592 223 236 40 40 chrX 132068660 132068735 -34581561 - MER5B DNA MER1_type -15 163 89 1 1592 2301 167 105 66 chrX 132068755 132069327 -34580969 - Lx7 LINE L1 -196 7500 6907 1 1592 7155 127 26 13 chrX 132069404 132070488 -34579808 - Lx3B LINE L1 -3 6970 5873 1 1592 28911 129 19 4 chrX 132070626 132076633 -34573663 - L1_Mus3 LINE L1 -7 6631 544 1 1592 1309 126 31 0 chrX 132076682 132076905 -34573391 - RLTR11B LTR ERVK 0 453 224 1 1592 1697 186 79 6 chrX 132077002 132077345 -34572951 + L1Md_F LINE L1 383 736 -5883 1 1592 19504 80 3 3 chrX 132077335 132079947 -34570349 + L1Md_F LINE L1 2997 5607 -279 1 1592 491 101 66 22 chrX 132079955 132080046 -34570250 + L1Md_F2 LINE L1 6487 6581 -1 1 1592 714 245 93 39 chrX 132080405 132080609 -34569687 - B3 SINE B2 0 216 2 1 1592 228 297 10 29 chrX 132080628 132080732 -34569564 - L1_Mm LINE L1 -1060 4823 4722 1 1592 1752 205 62 50 chrX 132080826 132081262 -34569034 - Lx2B LINE L1 -18 6982 6542 1 1592 1317 171 43 50 chrX 132081439 132081741 -34568555 - L1_Mur2 LINE L1 -6402 310 11 1 1592 282 160 0 0 chrX 132082626 132082676 -34567620 + (CTG)n Simple_repeat Simple_repeat 1 50 0 1 1592 1287 99 17 0 chrX 132085079 132085260 -34565036 + B2_Mm1t SINE B2 2 185 -8 1 1592 694 210 51 0 chrX 132085865 132086003 -34564293 + B1_Mur2 SINE Alu 5 149 0 1 1592 554 143 0 9 chrX 132086003 132086109 -34564187 + GA-rich Low_complexity Low_complexity 4 108 0 1 1592 396 0 0 0 chrX 132087451 132087495 -34562801 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1592 593 369 43 18 chrX 132087652 132087928 -34562368 + B4A SINE B4 2 284 -8 1 1592 1136 217 192 6 chrX 132088990 132089324 -34560972 - MTD LTR MaLR -23 396 1 1 1592 287 266 98 29 chrX 132089326 132089383 -34560913 - MTD-int LTR MaLR -2 1256 1185 1 1592 219 25 75 0 chrX 132089383 132089423 -34560873 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1592 287 266 98 29 chrX 132089423 132089539 -34560757 - MTD-int LTR MaLR -74 1184 1072 1 1592 468 77 0 0 chrX 132089590 132089655 -34560641 + (TG)n Simple_repeat Simple_repeat 1 65 0 1 1592 385 314 0 0 chrX 132089745 132089847 -34560449 - RSINE1 SINE B4 -29 136 35 1 1592 2049 142 15 0 chrX 132089847 132090172 -34560124 - L1VL2 LINE L1 -5985 350 21 1 1592 380 371 30 20 chrX 132090260 132090458 -34559838 + B4A SINE B4 93 292 0 1 1592 457 239 9 14 chrX 132090600 132090718 -34559578 + B1_Mur2 SINE Alu 2 114 -6 1 1592 452 283 0 0 chrX 132090917 132091076 -34559220 + CT-rich Low_complexity Low_complexity 2 160 0 1 1592 304 209 54 4 chrX 132091219 132091302 -34558994 - L1M4 LINE L1 -792 5391 5308 1 1592 901 273 56 106 chrX 132091543 132091894 -34558402 - RLTR28B LTR ERVL -38 443 90 1 1592 1130 138 27 11 chrX 132091894 132092077 -34558219 + B2_Mm2 SINE B2 4 189 -6 1 1592 901 273 56 106 chrX 132092077 132092188 -34558108 - RLTR28B LTR ERVL -392 89 5 1 1592 287 208 51 13 chrX 132092203 132092281 -34558015 - L1M4 LINE L1 -898 5248 5168 1 1592 442 298 37 22 chrX 132095295 132095429 -34554867 - B1_Mur1 SINE Alu -13 136 1 1 1592 459 293 8 0 chrX 132095860 132095983 -34554313 - RMER5 LTR ERV1 -16 518 395 1 1592 324 199 17 34 chrX 132095983 132096160 -34554136 + (TG)n Simple_repeat Simple_repeat 1 174 0 1 1592 1127 261 24 118 chrX 132096165 132096582 -34553714 - RMER5 LTR ERV1 -154 380 3 1 1592 246 32 0 0 chrX 132097888 132097919 -34552377 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1592 1043 273 79 26 chrX 132098170 132098512 -34551784 - MTD LTR MaLR -51 368 9 1 1592 388 279 16 16 chrX 132098585 132098709 -34551587 - RSINE1 SINE B4 -40 125 2 1 1592 769 249 22 16 chrX 132099159 132099343 -34550953 + B3 SINE B2 26 210 -6 1 1592 577 202 8 31 chrX 132099555 132099708 -34550588 - ORR1B1 LTR MaLR -159 225 69 1 1592 1111 272 71 8 chrX 132100009 132100387 -34549909 - MTD LTR MaLR 0 419 18 1 1592 300 292 27 45 chrX 132100441 132100552 -34549744 + RMER12 LTR ERVK 748 856 -466 1 1592 525 105 0 0 chrX 132100757 132100852 -34549444 + (TC)n Simple_repeat Simple_repeat 1 95 0 1 1592 655 291 88 30 chrX 132100966 132101224 -34549072 + Lx8 LINE L1 7057 7331 -142 1 1592 1008 151 0 0 chrX 132101224 132101403 -34548893 + GA-rich Low_complexity Low_complexity 2 180 0 1 1592 655 291 88 30 chrX 132101403 132101449 -34548847 + Lx8 LINE L1 7332 7379 -94 1 1592 1082 128 0 11 chrX 132101449 132101631 -34548665 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 1592 314 219 24 24 chrX 132101633 132101759 -34548537 + GA-rich Low_complexity Low_complexity 4 129 0 1 1592 233 167 20 20 chrX 132101760 132101785 -34548511 + polypurine Low_complexity Low_complexity 2 27 0 1 1592 1184 82 0 0 chrX 132101785 132101932 -34548364 + B1_Mus2 SINE Alu 1 147 0 1 1592 233 167 20 20 chrX 132101932 132101955 -34548341 + polypurine Low_complexity Low_complexity 28 50 0 1 1592 359 304 16 57 chrX 132102104 132102226 -34548070 + PB1D10 SINE Alu 1 117 0 1 1592 362 189 0 113 chrX 132102238 132102441 -34547855 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1592 464 271 64 77 chrX 132103858 132104078 -34546218 - Lx9 LINE L1 -435 7209 6993 1 1592 485 287 18 46 chrX 132104111 132104330 -34545966 - B3 SINE B2 0 216 4 1 1592 1381 293 56 72 chrX 132104340 132105390 -34544906 - Lx9 LINE L1 -643 7001 5717 1 1592 958 193 189 37 chrX 132105390 132105745 -34544551 + RLTR9E LTR ERVK 1 409 0 1 1592 1222 226 8 92 chrX 132105745 132105974 -34544322 - Lx9 LINE L1 -131 5716 5509 1 1592 223 267 0 0 chrX 132106146 132106191 -34544105 - PB1D10 SINE Alu -47 70 26 1 1592 280 313 157 35 chrX 132107108 132107502 -34542794 + MER92B LTR ERV1 30 471 -165 1 1592 1180 81 0 7 chrX 132108005 132108145 -34542151 + B1_Mus1 SINE Alu 1 140 -8 1 1592 183 42 0 0 chrX 132108145 132108169 -34542127 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1592 318 248 180 55 chrX 132109651 132109779 -34540517 - Lx8 LINE L1 -364 7109 6966 1 1592 564 285 8 0 chrX 132110546 132110676 -34539620 + MTE2b LTR MaLR 6 136 -243 1 1592 543 254 56 7 chrX 132110680 132110823 -34539473 + MTE2b LTR MaLR 270 419 0 1 1592 416 345 18 35 chrX 132110830 132111001 -34539295 - MTE-int LTR MaLR -625 955 788 1 1592 508 286 56 21 chrX 132111008 132111151 -34539145 - ORR1E LTR MaLR -133 226 79 1 1592 1484 225 83 60 chrX 132111152 132111726 -34538570 + RMER12 LTR ERVK 1 801 -603 1 1592 303 306 15 113 chrX 132111717 132111982 -34538314 + RMER12B LTR ERVK 564 1008 -396 1 1592 222 37 0 0 chrX 132112025 132112052 -34538244 + (CCTTG)n Simple_repeat Simple_repeat 1 27 0 1 1592 241 224 0 20 chrX 132112105 132112155 -34538141 - ORR1E LTR MaLR -278 81 33 1 1592 2077 268 64 57 chrX 132112167 132112919 -34537377 - ORR1E-int LTR MaLR -7 1363 607 1 1592 872 286 109 37 chrX 132112926 132113441 -34536855 + L1_Mur3 LINE L1 5315 5866 -14 1 1592 541 223 49 28 chrX 132113509 132113652 -34536644 - Lx6 LINE L1 -58 7402 7257 1 1592 1300 167 15 70 chrX 132113670 132113941 -34536355 - ORR1C1 LTR MaLR -122 256 1 1 1592 354 23 0 0 chrX 132114653 132114696 -34535600 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1592 414 0 0 0 chrX 132114696 132114741 -34535555 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 1592 582 244 31 18 chrX 132114864 132115027 -34535269 + RLTR18B LTR ERVK 210 374 -138 1 1592 235 113 19 19 chrX 132115031 132115085 -34535211 + A-rich Low_complexity Low_complexity 2 55 0 1 1592 757 308 81 68 chrX 132115138 132116395 -34533901 - L1MB5 LINE L1 -1 6173 4894 1 1592 259 287 21 20 chrX 132116524 132116632 -34533664 - L1MB5 LINE L1 -1431 4715 4601 1 1592 597 292 15 19 chrX 132116636 132116842 -34533454 - B3 SINE B2 -7 209 5 1 1592 717 273 8 16 chrX 132117193 132117439 -34532857 - L1MB5 LINE L1 -1710 4436 4193 1 1592 194 176 157 0 chrX 132118615 132118666 -34531630 - MIR SINE MIR -123 139 81 1 1593 221 179 0 0 chrX 132126597 132126636 -34523660 + B3A SINE B2 45 83 -115 1 1593 1735 196 39 37 chrX 132127079 132127514 -34522782 + RMER10A LTR ERVL 1 436 -6 1 1593 897 185 10 21 chrX 132128596 132128789 -34521507 + Lx5 LINE L1 6856 7046 -4 1 1593 8623 106 20 7 chrX 132128791 132130066 -34520230 + Lx3_Mus LINE L1 5686 6986 -23 1 1593 396 0 0 0 chrX 132130066 132130110 -34520186 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 1 1593 249 33 0 0 chrX 132130978 132131008 -34519288 + (CACCC)n Simple_repeat Simple_repeat 5 34 0 1 1593 804 194 0 0 chrX 132131629 132131773 -34518523 + B1_Mur4 SINE Alu 1 144 -6 1 1593 222 37 0 0 chrX 132131774 132131801 -34518495 + (TAAAA)n Simple_repeat Simple_repeat 4 30 0 1 1593 282 123 0 0 chrX 132132190 132132247 -34518049 + (A)n Simple_repeat Simple_repeat 1 57 0 1 1593 347 219 109 72 chrX 132132249 132132387 -34517909 - B4A SINE B4 -143 149 7 1 1593 2549 145 56 39 chrX 132133138 132133605 -34516691 - MT2C_Mm LTR ERVL 0 475 1 1 1593 228 88 0 0 chrX 132135053 132135087 -34515209 + ORR1D1 LTR MaLR 1 34 -340 2 1593 2309 125 8 33 chrX 132135148 132135546 -34514750 + RMER2 LTR ERV1 180 567 0 2 1593 210 37 0 0 chrX 132135663 132135690 -34514606 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1593 1092 89 0 27 chrX 132135690 132135830 -34514466 - B1_Mus1 SINE Alu -8 140 1 2 1593 222 37 0 0 chrX 132136571 132136598 -34513698 + (TTG)n Simple_repeat Simple_repeat 1 27 0 2 1593 323 381 47 20 chrX 132137621 132138028 -34512268 + MuRRS4-int LTR ERV1 1554 1971 -5807 2 1593 307 336 68 21 chrX 132138559 132138793 -34511503 + MuRRS4-int LTR ERV1 2758 3002 -2061 2 1593 1026 304 83 56 chrX 132139141 132139671 -34510625 + MuRRS4-int LTR ERV1 3166 3953 -1110 2 1593 3317 103 82 49 chrX 132140115 132140664 -34509632 + RMER2 LTR ERV1 1 567 0 2 1593 703 249 121 9 chrX 132140669 132140900 -34509396 + Lx8 LINE L1 5540 5796 -51 2 1593 1269 269 57 49 chrX 132141171 132141586 -34508710 + MTD LTR MaLR 1 405 -14 2 1593 3589 264 37 47 chrX 132141591 132142857 -34507439 + MTD-int LTR MaLR 6 1258 0 2 1593 1669 199 74 3 chrX 132142857 132143235 -34507061 + MTD LTR MaLR 1 405 -14 2 1593 1393 259 125 29 chrX 132143521 132143621 -34506675 + Lx8 LINE L1 6899 7007 -466 2 1593 200 35 35 0 chrX 132143621 132143650 -34506646 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2 1593 1393 259 125 29 chrX 132143650 132144070 -34506226 + Lx8 LINE L1 7008 7468 -5 2 1593 1338 61 0 32 chrX 132144108 132144294 -34506002 + L1_Mus1 LINE L1 6388 6567 0 2 1593 276 307 0 0 chrX 132144486 132144561 -34505735 - ID_B1 SINE B4 -66 158 84 2 1593 450 49 0 0 chrX 132144747 132144808 -34505488 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1593 342 0 0 0 chrX 132145123 132145161 -34505135 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2 1593 3241 190 9 20 chrX 132145927 132146576 -34503720 + RLTR26 LTR ERVK 1 642 0 2 1593 21 36 0 0 chrX 132149609 132149637 -34500659 + AT_rich Low_complexity Low_complexity 1 28 0 2 1593 22 35 0 0 chrX 132151399 132151428 -34498868 + AT_rich Low_complexity Low_complexity 1 29 0 2 1593 324 0 0 0 chrX 132151587 132151623 -34498673 + (TATG)n Simple_repeat Simple_repeat 3 38 0 2 1593 933 210 23 51 chrX 132153420 132153636 -34496660 + B3 SINE B2 7 216 0 2 1593 789 194 116 35 chrX 132153834 132154032 -34496264 + B3 SINE B2 2 215 -1 2 1593 21 0 0 0 chrX 132154187 132154208 -34496088 + AT_rich Low_complexity Low_complexity 1 21 0 2 1593 783 338 81 28 chrX 132154395 132155116 -34495180 + L1MC4a LINE L1 5416 6167 -1715 2 1593 581 307 24 28 chrX 132155177 132155428 -34494868 + MER2 DNA MER2_type 90 339 -6 2 1593 664 322 13 59 chrX 132155529 132155833 -34494463 - B4A SINE B4 -2 290 1 2 1593 328 226 125 31 chrX 132155936 132156064 -34494232 + L1MC4a LINE L1 6344 6483 -1399 2 1593 526 274 63 5 chrX 132156301 132156484 -34493812 + L1MC4a LINE L1 6925 7123 -759 2 1593 1217 37 0 18 chrX 132156484 132156649 -34493647 + L1Md_F2 LINE L1 6421 6582 0 2 1593 526 291 79 8 chrX 132156649 132156766 -34493530 + L1MC4a LINE L1 7115 7247 -748 2 1593 459 0 0 0 chrX 132156937 132156988 -34493308 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1593 23 0 0 0 chrX 132157002 132157025 -34493271 + AT_rich Low_complexity Low_complexity 1 23 0 2 1593 521 369 50 32 chrX 132157101 132157504 -34492792 + LTR53 LTR ERVL 110 519 0 2 1593 627 258 0 8 chrX 132157620 132157753 -34492543 + ID_B1 SINE B4 76 207 -17 2 1593 656 249 82 15 chrX 132157983 132158179 -34492117 - B3 SINE B2 -5 211 3 2 1593 351 312 0 89 chrX 132159031 132159154 -34491142 + B3 SINE B2 2 113 -103 2 1593 25 0 0 0 chrX 132160114 132160139 -34490157 + AT_rich Low_complexity Low_complexity 1 25 0 2 1593 372 304 63 33 chrX 132160528 132160830 -34489466 + L1M2 LINE L1 3873 4202 -1941 2 1593 337 324 63 34 chrX 132161011 132161279 -34489017 + L1MC4a LINE L1 7487 7762 -120 2 1593 262 123 35 0 chrX 132162082 132162139 -34488157 + T-rich Low_complexity Low_complexity 2 60 0 2 1593 1578 180 16 26 chrX 132162739 132163052 -34487244 + Lx5 LINE L1 6741 7050 0 2 1593 453 236 125 28 chrX 132163455 132163599 -34486697 + RSINE1 SINE B4 3 160 -5 2 1593 871 152 7 0 chrX 132164417 132164555 -34485741 + B1_Mus1 SINE Alu 5 143 -5 2 1593 8699 22 0 1 chrX 132164566 132166164 -34484132 - L1Md_T LINE L1 0 6582 4987 2 1593 37138 33 1 49 chrX 132166166 132172742 -34477554 - L1Md_A LINE L1 0 6585 253 2 1593 22 35 0 0 chrX 132172743 132172772 -34477524 + AT_rich Low_complexity Low_complexity 1 29 0 2 1593 639 254 46 74 chrX 132172777 132172875 -34477421 - B3 SINE B2 -5 211 112 2 1593 377 20 0 20 chrX 132172875 132172926 -34477370 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 2 1593 639 254 46 74 chrX 132172926 132173044 -34477252 - B3 SINE B2 -105 111 1 2 1593 1140 69 35 0 chrX 132173124 132173297 -34476999 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2 1593 635 157 0 8 chrX 132173297 132173526 -34476770 + CT-rich Low_complexity Low_complexity 1 227 0 2 1593 25 0 0 0 chrX 132173630 132173655 -34476641 + AT_rich Low_complexity Low_complexity 1 25 0 2 1593 278 231 0 4 chrX 132173668 132173741 -34476555 + ID4_ SINE ID 31 102 -50 2 1593 657 328 69 25 chrX 132174146 132174552 -34475744 - L1MD2 LINE L1 -4 6355 5932 2 1593 217 269 256 0 chrX 132174815 132174893 -34475403 - B1F SINE Alu -42 107 10 2 1593 1046 299 67 35 chrX 132174919 132175455 -34474841 - L1MD2 LINE L1 -648 5594 5046 2 1593 288 0 0 0 chrX 132175455 132175487 -34474809 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1593 1046 308 99 48 chrX 132175487 132176295 -34474001 - L1MD2 LINE L1 -1101 5045 4188 2 1593 829 258 133 10 chrX 132176307 132176616 -34473680 - Lx8 LINE L1 -2 7471 7125 2 1593 1133 51 0 0 chrX 132176673 132176810 -34473486 - L1_Mus1 LINE L1 -648 5919 5783 2 1593 7578 81 1 2 chrX 132176816 132177982 -34472314 - L1_Mus2 LINE L1 -1 6565 5401 2 1593 5344 49 34 1 chrX 132177982 132178654 -34471642 + L1_Mus1 LINE L1 5874 6567 0 2 1593 25 0 0 0 chrX 132178821 132178846 -34471450 + AT_rich Low_complexity Low_complexity 1 25 0 2 1593 25 0 0 0 chrX 132179014 132179039 -34471257 + AT_rich Low_complexity Low_complexity 1 25 0 2 1593 250 287 96 0 chrX 132179769 132179884 -34470412 - Lx6 LINE L1 -26 7434 7309 2 1593 527 258 78 0 chrX 132179924 132180091 -34470205 + ORR1C2 LTR MaLR 1 180 -198 2 1593 512 77 44 0 chrX 132180091 132180182 -34470114 + (TC)n Simple_repeat Simple_repeat 1 95 0 2 1593 813 159 120 21 chrX 132180184 132180376 -34469920 + ORR1C2 LTR MaLR 174 384 0 2 1593 321 26 0 0 chrX 132180630 132180668 -34469628 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1593 540 30 0 0 chrX 132180668 132180733 -34469563 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 1593 932 301 21 60 chrX 132180737 132181181 -34469115 + Lx8 LINE L1 6590 7040 -604 2 1593 307 202 62 12 chrX 132181260 132181340 -34468956 - Lx7 LINE L1 -4 7692 7609 2 1593 504 274 147 22 chrX 132181801 132182115 -34468181 - L1M2 LINE L1 -3447 2696 2344 2 1593 367 334 54 18 chrX 132182145 132182532 -34467764 + L1MA5 LINE L1 5876 6276 -24 2 1593 3439 99 13 8 chrX 132183385 132183913 -34466383 - RMER2 LTR ERV1 -36 531 1 2 1593 284 322 103 29 chrX 132184728 132184971 -34465325 - RLTR6-int LTR ERV1 -3373 4405 4145 2 1593 356 376 47 20 chrX 132185492 132185899 -34464397 - RLTR6-int LTR ERV1 -5807 1971 1554 2 1593 1084 82 0 27 chrX 132187331 132187471 -34462825 + B1_Mus1 SINE Alu 1 140 -8 2 1593 243 0 0 0 chrX 132187471 132187498 -34462798 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1593 3824 106 16 23 chrX 132187615 132188186 -34462110 - RMER2 LTR ERV1 0 567 1 2 1593 2325 164 56 16 chrX 132188229 132188698 -34461598 + RLTR31A_Mm LTR ERVK 1 584 0 2 1593 2512 56 25 6 chrX 132188760 132189085 -34461211 + L1Md_F2 LINE L1 6252 6582 0 2 1593 1781 189 70 0 chrX 132189755 132190114 -34460182 + ORR1C2 LTR MaLR 1 384 0 2 1593 672 173 2 8 chrX 132190537 132190683 -34459613 + B2_Mm2 SINE B2 24 166 -27 2 1593 370 0 40 0 chrX 132190843 132190893 -34459403 + (TC)n Simple_repeat Simple_repeat 2 53 0 2 1593 737 150 35 35 chrX 132191048 132191185 -34459111 - B1_Mur4 SINE Alu 0 150 13 2 1593 2778 147 113 98 chrX 132191185 132191865 -34458431 - RMER6C LTR ERVK 0 690 1 2 1593 387 0 0 0 chrX 132192591 132192634 -34457662 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 1593 910 277 68 0 chrX 132192860 132193109 -34457187 + B4A SINE B4 4 269 -23 2 1593 405 0 0 0 chrX 132193180 132193225 -34457071 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 2 1593 2277 318 70 8 chrX 132193852 132194825 -34455471 + Lx8 LINE L1 6439 7471 -2 2 1593 265 264 11 11 chrX 132195443 132195535 -34454761 + MLT1A1 LTR MaLR 314 405 -3 2 1593 2523 67 0 18 chrX 132195651 132195987 -34454309 + L1Md_F2 LINE L1 6252 6581 -1 2 1593 998 370 57 70 chrX 132196007 132197030 -34453266 + MLT-int LTR MaLR 111 1119 -616 2 1593 902 310 40 3 chrX 132197670 132197968 -34452328 + Lx8 LINE L1 6819 7127 -346 2 1593 794 249 19 14 chrX 132198090 132198298 -34451998 + B3 SINE B2 3 211 -5 2 1593 28 29 0 0 chrX 132198298 132198333 -34451963 + AT_rich Low_complexity Low_complexity 1 35 0 2 1593 209 232 14 0 chrX 132198664 132198733 -34451563 + CT-rich Low_complexity Low_complexity 3 72 0 2 1593 943 158 0 20 chrX 132199505 132199654 -34450642 - B1_Mus1 SINE Alu 0 148 3 2 1593 213 324 0 0 chrX 132200324 132200398 -34449898 + CT-rich Low_complexity Low_complexity 1 74 0 2 1593 218 29 0 56 chrX 132200406 132200442 -34449854 + (TCTCTG)n Simple_repeat Simple_repeat 3 36 0 2 1593 374 176 27 18 chrX 132200488 132200598 -34449698 + CT-rich Low_complexity Low_complexity 4 114 0 2 1593 223 342 0 12 chrX 132201634 132201714 -34448582 + L2b LINE L2 3297 3375 0 2 1593 487 298 76 44 chrX 132202072 132202230 -34448066 - RSINE1 SINE B4 0 165 3 2 1593 838 272 14 0 chrX 132202414 132202627 -34447669 + B3 SINE B2 1 216 0 2 1593 341 274 144 8 chrX 132202881 132202999 -34447297 - B4A SINE B4 -11 281 148 2 1593 851 195 4 103 chrX 132203086 132203320 -34446976 + RMER16 LTR ERVK 323 533 0 2 1593 378 271 70 63 chrX 132203320 132203443 -34446853 - B4 SINE B4 -135 157 34 2 1593 600 221 75 31 chrX 132203496 132203655 -34446641 - B3 SINE B2 -40 176 11 2 1593 277 224 11 78 chrX 132204106 132204285 -34446011 + (CAGAGA)n Simple_repeat Simple_repeat 2 168 0 2 1593 247 303 6 27 chrX 132204324 132204507 -34445789 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 2 1593 352 210 16 88 chrX 132204653 132204846 -34445450 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 2 1593 371 102 0 33 chrX 132204906 132204967 -34445329 + PB1D9 SINE Alu 1 59 -61 3 1593 276 149 0 0 chrX 132204969 132205016 -34445280 + (CAGAGA)n Simple_repeat Simple_repeat 1 47 0 3 1593 624 220 0 21 chrX 132205016 132205197 -34445099 + (CAGAGA)n Simple_repeat Simple_repeat 1 177 0 3 1593 304 221 7 59 chrX 132205598 132205890 -34444406 + (CAGAGA)n Simple_repeat Simple_repeat 1 276 0 3 1593 367 253 12 49 chrX 132205975 132206137 -34444159 + (CAGAGA)n Simple_repeat Simple_repeat 5 160 0 3 1593 231 103 0 0 chrX 132206181 132206220 -34444076 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 3 1593 358 165 0 42 chrX 132206243 132206338 -34443958 + (CAGAGA)n Simple_repeat Simple_repeat 2 92 0 3 1593 3254 37 0 0 chrX 132206370 132206751 -34443545 + L1Md_F3 LINE L1 6190 6570 -14 3 1593 229 275 0 24 chrX 132206853 132207030 -34443266 + (CAGA)n Simple_repeat Simple_repeat 1 172 0 3 1593 187 145 31 31 chrX 132207040 132207104 -34443192 + (CAGAGA)n Simple_repeat Simple_repeat 2 65 0 3 1593 188 173 0 37 chrX 132207281 132207335 -34442961 + (CAGAGA)n Simple_repeat Simple_repeat 2 53 0 3 1593 455 230 0 52 chrX 132207696 132207870 -34442426 + (CAGAGA)n Simple_repeat Simple_repeat 2 166 0 3 1593 563 104 9 0 chrX 132207879 132207985 -34442311 + (GA)n Simple_repeat Simple_repeat 1 107 0 3 1593 380 246 11 64 chrX 132208126 132208313 -34441983 + (CAGAGA)n Simple_repeat Simple_repeat 3 179 0 3 1593 595 195 6 30 chrX 132208332 132208661 -34441635 + (CAGAGA)n Simple_repeat Simple_repeat 1 320 0 3 1593 354 183 0 46 chrX 132208710 132208868 -34441428 + (CAGAGA)n Simple_repeat Simple_repeat 1 150 0 3 1593 447 158 0 38 chrX 132208900 132209058 -34441238 + (CAGAGA)n Simple_repeat Simple_repeat 4 155 0 3 1593 236 274 6 73 chrX 132209104 132209269 -34441027 + (CAGAGA)n Simple_repeat Simple_repeat 3 156 0 3 1593 279 0 0 0 chrX 132209280 132209311 -34440985 + (CAGAGA)n Simple_repeat Simple_repeat 2 32 0 3 1593 184 156 0 59 chrX 132209408 132209476 -34440820 + (CAGAGA)n Simple_repeat Simple_repeat 4 67 0 3 1593 218 264 5 65 chrX 132209578 132209764 -34440532 + (CAGAGA)n Simple_repeat Simple_repeat 3 177 0 3 1593 273 89 0 0 chrX 132209834 132209879 -34440417 + (CAGAGA)n Simple_repeat Simple_repeat 4 48 0 3 1593 238 242 0 50 chrX 132209924 132210024 -34440272 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 3 1593 382 296 5 48 chrX 132210056 132210244 -34440052 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 3 1593 192 125 0 0 chrX 132210257 132210289 -34440007 + (CAGAGA)n Simple_repeat Simple_repeat 4 35 0 3 1593 199 146 0 35 chrX 132210374 132210431 -34439865 + G-rich Low_complexity Low_complexity 6 60 0 3 1593 354 253 11 63 chrX 132210535 132210725 -34439571 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 3 1593 786 228 4 34 chrX 132210912 132211416 -34438880 + (CAGAGA)n Simple_repeat Simple_repeat 1 488 0 3 1593 303 182 0 75 chrX 132211548 132211708 -34438588 + (CAGAGA)n Simple_repeat Simple_repeat 2 149 0 3 1593 439 244 16 54 chrX 132211905 132212091 -34438205 + (CAGAGA)n Simple_repeat Simple_repeat 1 179 0 3 1593 444 225 5 73 chrX 132212170 132212362 -34437934 + (CAGAGA)n Simple_repeat Simple_repeat 1 179 0 3 1593 186 222 0 0 chrX 132212440 132212494 -34437802 + (CAGAGA)n Simple_repeat Simple_repeat 1 54 0 3 1593 421 207 0 94 chrX 132212507 132212699 -34437597 + (CAGAGA)n Simple_repeat Simple_repeat 1 174 0 3 1593 329 256 0 65 chrX 132212911 132213095 -34437201 + (CAGAGA)n Simple_repeat Simple_repeat 2 173 0 3 1593 209 116 27 80 chrX 132213256 132213331 -34436965 + (CAGAGA)n Simple_repeat Simple_repeat 1 71 0 3 1593 267 287 12 48 chrX 132213460 132213625 -34436671 + (CAGAGA)n Simple_repeat Simple_repeat 2 160 0 3 1593 376 225 14 28 chrX 132213677 132213895 -34436401 + (CAGAGA)n Simple_repeat Simple_repeat 1 214 0 3 1593 292 247 12 64 chrX 132213915 132214088 -34436208 + (CAGAGA)n Simple_repeat Simple_repeat 2 165 0 3 1593 229 258 10 82 chrX 132214122 132214316 -34435980 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 3 1593 238 214 18 18 chrX 132214334 132214448 -34435848 + (CAGAGA)n Simple_repeat Simple_repeat 3 116 0 3 1593 465 258 5 43 chrX 132214715 132214901 -34435395 + (CAGAGA)n Simple_repeat Simple_repeat 1 179 0 3 1593 588 50 0 0 chrX 132215267 132215347 -34434949 + (GA)n Simple_repeat Simple_repeat 1 80 0 3 1593 341 216 16 76 chrX 132215352 132215537 -34434759 + (CAGAGA)n Simple_repeat Simple_repeat 6 179 0 3 1593 468 247 5 43 chrX 132215641 132215827 -34434469 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 3 1593 184 217 15 44 chrX 132215963 132216098 -34434198 + (CAGAGA)n Simple_repeat Simple_repeat 2 132 0 3 1593 417 182 8 109 chrX 132216329 132216715 -34433581 + (CAGAGA)n Simple_repeat Simple_repeat 1 346 0 3 1593 265 242 0 85 chrX 132216757 132216933 -34433363 + (CAGAGA)n Simple_repeat Simple_repeat 2 162 0 3 1593 365 272 5 60 chrX 132217079 132217263 -34433033 + (CAGAGA)n Simple_repeat Simple_repeat 1 174 0 3 1593 206 187 0 75 chrX 132217409 132217542 -34432754 + (CAGAGA)n Simple_repeat Simple_repeat 2 124 0 3 1593 228 144 8 83 chrX 132217644 132217765 -34432531 + (CAGAGA)n Simple_repeat Simple_repeat 3 114 0 3 1593 490 236 0 63 chrX 132217908 132218098 -34432198 + (CAGAGA)n Simple_repeat Simple_repeat 2 179 0 3 1593 270 0 0 0 chrX 132218201 132218231 -34432065 + (CAGAGA)n Simple_repeat Simple_repeat 1 30 0 3 1593 310 279 0 63 chrX 132218294 132218485 -34431811 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 3 1593 265 251 0 87 chrX 132218654 132218850 -34431446 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 3 1593 236 158 18 0 chrX 132218898 132218955 -34431341 + (CAGAGA)n Simple_repeat Simple_repeat 2 59 0 3 1593 4803 73 6 3 chrX 132219202 132219835 -34430461 + L1_Mus3 LINE L1 6004 6638 0 3 1593 962 125 6 17 chrX 132219853 132220032 -34430264 + (GAAA)n Simple_repeat Simple_repeat 1 177 0 3 1593 216 97 0 0 chrX 132220033 132220064 -34430232 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 1593 633 27 0 0 chrX 132220086 132220161 -34430135 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 3 1593 681 107 0 0 chrX 132220341 132220463 -34429833 + (CAGAGA)n Simple_repeat Simple_repeat 3 124 0 3 1593 289 222 20 29 chrX 132220542 132220644 -34429652 + (CAGAGA)n Simple_repeat Simple_repeat 6 106 0 3 1593 365 220 5 83 chrX 132221093 132221286 -34429010 + (CAGAGA)n Simple_repeat Simple_repeat 2 179 0 3 1593 242 237 0 73 chrX 132221313 132221436 -34428860 + (CAGAGA)n Simple_repeat Simple_repeat 1 114 0 3 1593 217 193 0 46 chrX 132221611 132221698 -34428598 + (CAGAGA)n Simple_repeat Simple_repeat 2 84 0 3 1593 263 242 6 75 chrX 132221714 132221888 -34428408 + (CAGAGA)n Simple_repeat Simple_repeat 1 162 0 3 1593 399 198 3 79 chrX 132221921 132222222 -34428074 + (CAGAGA)n Simple_repeat Simple_repeat 1 278 0 3 1593 354 211 5 98 chrX 132222341 132222535 -34427761 + (CAGAGA)n Simple_repeat Simple_repeat 3 178 0 3 1593 258 235 6 93 chrX 132222641 132222772 -34427524 + (CAGAGA)n Simple_repeat Simple_repeat 4 125 0 3 1593 669 47 0 0 chrX 132222772 132222857 -34427439 + (GA)n Simple_repeat Simple_repeat 2 86 0 3 1593 258 235 6 93 chrX 132222857 132222908 -34427388 + (CAGAGA)n Simple_repeat Simple_repeat 6 50 0 3 1593 208 246 0 71 chrX 132223203 132223330 -34426966 + (CAGAGA)n Simple_repeat Simple_repeat 3 120 0 3 1593 206 160 20 0 chrX 132223348 132223398 -34426898 + (CAGAGA)n Simple_repeat Simple_repeat 1 51 0 3 1593 428 160 28 39 chrX 132223734 132223916 -34426380 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 3 1593 271 201 7 54 chrX 132224162 132224309 -34425987 + (CAGAGA)n Simple_repeat Simple_repeat 2 141 0 3 1593 821 192 6 0 chrX 132224355 132224681 -34425615 + GA-rich Low_complexity Low_complexity 1 328 0 3 1593 244 247 26 0 chrX 132224753 132224830 -34425466 - ORR1C1 LTR MaLR -197 181 103 3 1593 244 281 82 66 chrX 132225686 132225808 -34424488 + Lx8 LINE L1 6453 6576 -897 3 1593 1123 255 44 72 chrX 132225811 132226174 -34424122 - ORR1E LTR MaLR -6 353 1 3 1593 1895 289 112 26 chrX 132226181 132226999 -34423297 + Lx8 LINE L1 6573 7461 -12 3 1593 318 342 55 15 chrX 132227021 132227220 -34423076 + L1M2 LINE L1 4327 4533 -1610 3 1593 375 346 8 8 chrX 132227270 132227404 -34422892 - Lx8 LINE L1 -284 7189 7056 3 1593 975 149 0 0 chrX 132228840 132228988 -34421308 + B1_Mur4 SINE Alu 3 150 0 3 1593 276 100 0 0 chrX 132228989 132229029 -34421267 + (GAAA)n Simple_repeat Simple_repeat 2 41 0 3 1593 3307 39 0 0 chrX 132229087 132229477 -34420819 + L1Md_A LINE L1 6193 6582 0 3 1593 254 243 104 28 chrX 132229477 132229583 -34420713 + L1MA6 LINE L1 6166 6279 -21 3 1593 1820 188 35 16 chrX 132229743 132230116 -34420180 + RLTR14 LTR ERV1 3 382 0 3 1593 858 198 85 10 chrX 132230824 132231023 -34419273 - RMER19C LTR ERVK -34 577 364 3 1593 576 180 51 72 chrX 132231019 132231157 -34419139 - RMER19B LTR ERVK -421 481 347 3 1593 532 270 0 16 chrX 132231231 132231359 -34418937 - MurERV4_19-int LTR ERVK -418 5362 5237 3 1593 747 144 0 0 chrX 132231359 132231484 -34418812 + (GAA)n Simple_repeat Simple_repeat 2 126 0 3 1593 205 65 0 31 chrX 132231487 132231519 -34418777 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 3 1593 12850 123 40 25 chrX 132231519 132233653 -34416643 - MurERV4_19-int LTR ERVK -535 5245 3081 3 1593 1582 34 0 0 chrX 132233653 132233858 -34416438 + ORR1A0-int LTR MaLR 1588 1792 0 3 1593 3090 29 0 0 chrX 132233858 132234204 -34416092 + ORR1A0 LTR MaLR 1 346 0 3 1593 3275 197 23 5 chrX 132234222 132234834 -34415462 - MurERV4_19-int LTR ERVK -4907 873 251 3 1593 7139 123 18 9 chrX 132234881 132236677 -34413619 + Lx LINE L1 4843 6654 0 3 1593 507 233 146 0 chrX 132238071 132238270 -34412026 - L1M2 LINE L1 -501 5790 5554 3 1593 635 157 171 30 chrX 132238305 132238469 -34411827 + MTD LTR MaLR 1 187 -232 3 1593 324 0 0 0 chrX 132238469 132238505 -34411791 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 1593 286 258 56 16 chrX 132238575 132238701 -34411595 - L1M2 LINE L1 -909 5234 5104 3 1593 479 321 72 36 chrX 132238933 132239156 -34411140 + MER76-int LTR ERVL 1030 1260 -4929 3 1593 813 222 52 38 chrX 132239360 132239571 -34410725 + B3 SINE B2 2 215 -1 3 1593 454 152 174 0 chrX 132239766 132239858 -34410438 + RLTR14 LTR ERV1 275 382 0 3 1593 442 327 67 4 chrX 132239929 132240199 -34410097 - L1M2 LINE L1 -972 5171 4885 3 1593 974 134 0 0 chrX 132240201 132240343 -34409953 + B1_Mus2 SINE Alu 1 142 -5 3 1593 2735 36 30 0 chrX 132240683 132241018 -34409278 - L1Md_F2 LINE L1 0 6582 6238 3 1593 4025 165 54 50 chrX 132241085 132241972 -34408324 - L1_Mur2 LINE L1 -3034 2843 1953 3 1593 2764 204 10 83 chrX 132241974 132242284 -34408012 + Lx4B LINE L1 5511 5828 -1230 3 1593 1188 63 0 0 chrX 132242284 132242427 -34407869 + B1_Mm SINE Alu 5 147 0 3 1593 2764 285 75 78 chrX 132242427 132243688 -34406608 + Lx4B LINE L1 5829 7432 -28 3 1593 594 79 0 0 chrX 132243688 132243777 -34406519 + (CATA)n Simple_repeat Simple_repeat 2 90 0 3 1593 812 217 31 6 chrX 132244341 132244503 -34405793 + B3 SINE B2 10 175 -41 3 1593 620 262 119 36 chrX 132244624 132244877 -34405419 + RLTR20D LTR ERVK 1 274 -294 3 1593 416 264 53 20 chrX 132244875 132244932 -34405364 + RLTR20D LTR ERVK 423 479 -99 3 1593 468 0 0 0 chrX 132244932 132244984 -34405312 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1593 416 264 53 20 chrX 132244984 132245077 -34405219 + RLTR20D LTR ERVK 480 577 -1 3 1593 22 0 0 0 chrX 132245440 132245462 -34404834 + AT_rich Low_complexity Low_complexity 1 22 0 3 1593 4251 46 6 4 chrX 132246426 132246945 -34403351 + L1Md_F2 LINE L1 6061 6580 -2 3 1593 225 312 160 23 chrX 132246954 132247085 -34403211 + B4A SINE B4 2 150 -142 3 1593 257 156 0 0 chrX 132247167 132247212 -34403084 + RMER19C LTR ERVK 1 45 -566 3 1593 1067 291 34 77 chrX 132247212 132247719 -34402577 + RMER19C LTR ERVK 175 611 0 3 1593 180 0 0 0 chrX 132248040 132248060 -34402236 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1593 332 255 9 56 chrX 132248084 132248192 -34402104 + RLTR14 LTR ERV1 268 370 -12 3 1593 355 342 44 68 chrX 132248204 132248452 -34401844 + RLTR14-int LTR ERV1 2 243 -5074 3 1593 7754 90 16 0 chrX 132248619 132250181 -34400115 + L1_Mus1 LINE L1 4744 6338 -229 3 1593 901 85 0 0 chrX 132250181 132250311 -34399985 + RMER17A LTR ERVK 1 130 -621 3 1593 8241 52 25 2 chrX 132250311 132251366 -34398930 + RMER17A-int LTR ERVK 321 1728 0 3 199 2021 102 359 1 chrX 132251366 132251657 -34398639 + RMER17A LTR ERVK 1 393 -358 3 1594 926 62 44 0 chrX 132251657 132251817 -34398479 + (TC)n Simple_repeat Simple_repeat 1 167 0 3 1594 2021 99 17 31 chrX 132251817 132252162 -34398134 + RMER17A LTR ERVK 394 733 -18 3 1594 1896 67 0 0 chrX 132252188 132252427 -34397869 + L1_Mus1 LINE L1 6329 6567 0 3 1594 301 70 35 0 chrX 132252433 132252490 -34397806 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 3 1594 793 159 0 119 chrX 132252711 132252896 -34397400 + ORR1C1 LTR MaLR 1 163 -215 3 1594 617 194 0 0 chrX 132252970 132253099 -34397197 + ORR1C1 LTR MaLR 188 316 -78 3 1594 465 19 0 0 chrX 132253490 132253544 -34396752 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1594 593 197 44 29 chrX 132255724 132255860 -34394436 + B1_Mur2 SINE Alu 7 144 -5 3 1594 201 264 0 77 chrX 132255884 132255962 -34394334 + G-rich Low_complexity Low_complexity 2 73 0 3 1594 497 184 19 39 chrX 132255964 132256383 -34393913 + GA-rich Low_complexity Low_complexity 1 410 0 3 1594 303 270 120 35 chrX 132256391 132256533 -34393763 + HAL1-3A_ME LINE L1 2285 2438 -420 4 1594 208 137 39 0 chrX 132256585 132256636 -34393660 + GA-rich Low_complexity Low_complexity 1 53 0 4 1594 1287 261 40 48 chrX 132256731 132257102 -34393194 + Lx8 LINE L1 6625 6992 -481 4 1594 242 200 0 32 chrX 132257105 132257167 -34393129 + ORR1C1 LTR MaLR 306 365 -14 3 1594 355 247 75 26 chrX 132257205 132257314 -34392982 + PB1D10 SINE Alu 6 116 -1 4 1594 387 0 0 0 chrX 132257331 132257374 -34392922 + (CATA)n Simple_repeat Simple_repeat 2 44 0 4 1594 461 204 32 110 chrX 132257378 132257532 -34392764 + B1_Mur2 SINE Alu 2 143 -6 4 1594 384 300 137 87 chrX 132257641 132257918 -34392378 - B4A SINE B4 0 292 2 4 1594 21 57 0 0 chrX 132257976 132258011 -34392285 + AT_rich Low_complexity Low_complexity 1 35 0 4 1594 467 340 26 21 chrX 132258452 132258641 -34391655 + B4A SINE B4 53 242 -50 4 1594 827 170 14 7 chrX 132258652 132258800 -34391496 + B1_Mur4 SINE Alu 1 149 -1 4 1594 267 294 0 0 chrX 132258822 132258890 -34391406 + B3 SINE B2 1 68 -148 4 1594 213 224 0 65 chrX 132259754 132259816 -34390480 + (GGGTG)n Simple_repeat Simple_repeat 1 58 0 4 1594 22 0 0 0 chrX 132260044 132260066 -34390230 + AT_rich Low_complexity Low_complexity 1 22 0 4 1594 387 0 0 0 chrX 132261492 132261535 -34388761 + (TAA)n Simple_repeat Simple_repeat 3 45 0 4 1594 185 211 0 19 chrX 132262958 132263011 -34387285 + CT-rich Low_complexity Low_complexity 1 52 0 4 1594 218 200 0 0 chrX 132263225 132263265 -34387031 + T-rich Low_complexity Low_complexity 3 42 0 4 1594 748 46 278 0 chrX 132263546 132263654 -34386642 - B1_Mus1 SINE Alu -10 138 1 4 1594 328 207 24 0 chrX 132264387 132264469 -34385827 + L1M4 LINE L1 4638 4721 -1425 4 1594 485 271 31 8 chrX 132264779 132264908 -34385388 - RSINE1 SINE B4 -12 153 22 4 1594 1355 204 3 46 chrX 132264908 132265231 -34385065 - MTD LTR MaLR 0 419 111 4 1594 635 214 50 0 chrX 132265233 132265373 -34384923 + B1_Mur1 SINE Alu 2 148 -1 4 1594 228 158 32 0 chrX 132265576 132265674 -34384622 + GA-rich Low_complexity Low_complexity 1 101 0 4 1594 434 239 16 209 chrX 132265735 132266122 -34384174 - RLTR22_Mus LTR ERVK -1006 802 491 4 1594 421 189 70 22 chrX 132266111 132266252 -34384044 - RMER12 LTR ERVK -760 644 447 4 1594 8525 25 1 0 chrX 132266252 132267828 -34382468 - L1Md_A LINE L1 -9 6573 4995 4 1594 1796 129 3 55 chrX 132267864 132268191 -34382105 - RMER12 LTR ERVK -1012 310 1 4 1594 270 248 13 127 chrX 132268264 132268329 -34381967 + L1MB7 LINE L1 6032 6091 -93 4 1594 681 56 0 0 chrX 132268329 132268419 -34381877 + (TTTC)n Simple_repeat Simple_repeat 3 92 0 4 1594 1223 55 0 0 chrX 132268420 132268566 -34381730 - B1_Mus1 SINE Alu 0 148 3 4 1594 270 248 13 127 chrX 132268566 132268655 -34381641 + L1MB7 LINE L1 6092 6169 -15 4 1594 22 0 0 0 chrX 132268663 132268685 -34381611 + AT_rich Low_complexity Low_complexity 1 22 0 4 1594 1503 46 0 0 chrX 132270109 132270284 -34380012 - B2_Mm1a SINE B2 -18 175 1 4 1594 1277 129 0 20 chrX 132270421 132270618 -34379678 - B2_Mm2 SINE B2 -1 194 2 4 1594 3124 51 13 3 chrX 132270641 132271031 -34379265 + L1Md_F2 LINE L1 6177 6570 -12 4 1594 248 276 26 0 chrX 132271328 132271404 -34378892 - L1PB4 LINE L1 -226 5930 5853 4 1594 428 361 299 8 chrX 132271403 132271771 -34378525 + Lx8 LINE L1 6745 7219 -254 4 1594 246 181 13 40 chrX 132272000 132272075 -34378221 + (TTTG)n Simple_repeat Simple_repeat 4 76 0 4 1594 300 268 164 47 chrX 132272102 132272272 -34378024 - L1M2 LINE L1 -1186 4957 4784 4 1594 824 319 126 29 chrX 132272452 132272895 -34377401 - Lx8 LINE L1 -137 7336 6851 4 1594 813 73 0 0 chrX 132272907 132273016 -34377280 + (TTTTC)n Simple_repeat Simple_repeat 4 112 0 4 1594 337 109 15 15 chrX 132273016 132273081 -34377215 + (TTCC)n Simple_repeat Simple_repeat 2 66 0 4 1594 730 133 7 59 chrX 132273081 132273217 -34377079 - B1_Mur4 SINE Alu -21 129 1 4 1594 263 146 0 0 chrX 132273221 132273269 -34377027 - Lx8 LINE L1 -636 6837 6790 4 1594 475 226 58 29 chrX 132273275 132273412 -34376884 + B1_Mur1 SINE Alu 9 149 0 4 1594 1221 48 157 0 chrX 132273499 132273665 -34376631 + B2_Mm1a SINE B2 1 192 -1 4 1594 376 36 18 0 chrX 132273665 132273720 -34376576 + B1_Mm SINE Alu 92 147 0 4 1594 1139 336 30 30 chrX 132273732 132274123 -34376173 - Lx8 LINE L1 -712 6761 6382 4 1594 270 0 0 0 chrX 132274123 132274153 -34376143 + (TTG)n Simple_repeat Simple_repeat 1 30 0 4 1594 1139 336 30 30 chrX 132274153 132274255 -34376041 - Lx8 LINE L1 -1092 6381 6268 4 1594 414 0 0 0 chrX 132274255 132274301 -34375995 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1594 807 280 0 77 chrX 132274302 132274600 -34375696 - Lx8 LINE L1 -141 5706 5432 4 1594 5844 77 9 6 chrX 132274790 132275640 -34374656 - L1_Mus2 LINE L1 0 6566 5777 4 1594 269 0 0 0 chrX 132275640 132275670 -34374626 + L1_Mus4 LINE L1 5692 5721 -915 4 1594 619 190 7 7 chrX 132275670 132275813 -34374483 + CT-rich Low_complexity Low_complexity 2 144 0 4 1594 216 0 0 0 chrX 132276658 132276682 -34373614 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1594 195 42 0 0 chrX 132278866 132278890 -34371406 + (GGA)n Simple_repeat Simple_repeat 1 24 0 4 1594 252 0 0 0 chrX 132282864 132282892 -34367404 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 1594 1678 256 67 72 chrX 132283525 132284669 -34365627 - L1MA6 LINE L1 -240 7020 5879 4 1594 1210 61 0 20 chrX 132284669 132284819 -34365477 - B1_Mus2 SINE Alu 0 147 1 4 1594 1678 244 39 82 chrX 132284819 132285083 -34365213 - L1MA6 LINE L1 -1225 5878 5617 4 1594 1594 132 88 42 chrX 132285086 132285371 -34364925 - RLTR14 LTR ERV1 -84 298 1 4 1594 2128 146 11 17 chrX 132285371 132285732 -34364564 - RLTR14-int LTR ERV1 0 5317 4959 4 1594 6789 161 114 101 chrX 132285733 132287359 -34362937 - RLTR14-int LTR ERV1 -2307 3010 1363 4 1594 382 148 16 0 chrX 132287363 132287424 -34362872 - RLTR14-int LTR ERV1 -5255 62 1 4 1594 542 202 87 0 chrX 132287427 132287531 -34362765 - RLTR14 LTR ERV1 -3 379 267 4 1594 240 227 266 25 chrX 132287816 132288015 -34362281 - L1MA6 LINE L1 -3546 3557 3311 4 1594 1145 327 181 8 chrX 132288723 132289343 -34360953 - Lx8 LINE L1 -109 7364 6638 4 1594 977 150 159 80 chrX 132289478 132289717 -34360579 - RLTR22_Mur LTR ERVK 0 1848 1591 4 1594 4616 70 0 2 chrX 132289809 132290363 -34359933 + L1_Mus1 LINE L1 6015 6567 0 4 1594 5374 72 20 68 chrX 132290577 132291088 -34359208 - RLTR22_Mus LTR ERVK -991 817 314 4 1594 1275 55 0 0 chrX 132291088 132291233 -34359063 + B1_Mus2 SINE Alu 3 147 0 4 1594 5374 72 20 68 chrX 132291233 132291579 -34358717 - RLTR22_Mus LTR ERVK -1495 313 1 4 1594 292 212 35 12 chrX 132291579 132291665 -34358631 - L1MA6 LINE L1 -4305 2802 2715 4 1594 1221 61 0 7 chrX 132291682 132291831 -34358465 - B1_Mus1 SINE Alu 0 148 1 4 1594 264 59 0 0 chrX 132291837 132291871 -34358425 + (T)n Simple_repeat Simple_repeat 1 34 0 4 1594 1133 75 7 26 chrX 132291871 132292022 -34358274 - B1_Mus1 SINE Alu 0 148 1 4 1594 1568 44 33 0 chrX 132292059 132292240 -34358056 + B2_Mm2 SINE B2 1 187 -8 4 1594 324 70 0 0 chrX 132292314 132292357 -34357939 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1594 540 293 62 43 chrX 132292507 132293012 -34357284 - L1MA6 LINE L1 -4639 2468 1638 4 1594 243 250 16 0 chrX 132294409 132294473 -34355823 - L1MA6 LINE L1 -6904 126 62 4 1594 247 171 0 0 chrX 132294581 132294622 -34355674 - L1M4 LINE L1 -989 5455 5415 4 1594 644 250 14 35 chrX 132295175 132295320 -34354976 - ID_B1 SINE B4 -2 222 81 4 1594 318 241 12 12 chrX 132295323 132295403 -34354893 - L1M4 LINE L1 -841 5333 5254 4 1594 552 240 41 8 chrX 132295430 132295552 -34354744 - RSINE1 SINE B4 -38 127 2 4 1594 928 294 30 30 chrX 132295554 132295985 -34354311 - L1M4 LINE L1 -981 5165 4735 4 1594 218 122 53 140 chrX 132296004 132296061 -34354235 - PB1 SINE Alu 0 127 76 4 1594 524 258 15 15 chrX 132296011 132296141 -34354155 - ID_B1 SINE B4 -1 223 94 4 1594 260 246 18 0 chrX 132296253 132296310 -34353986 - Lx8 LINE L1 -345 7128 7071 4 1594 628 254 103 22 chrX 132296303 132296488 -34353808 + Lx8 LINE L1 7116 7315 -158 4 1594 2575 215 133 11 chrX 132296518 132297129 -34353167 - Lx6 LINE L1 -8 7452 6768 4 1594 1765 247 128 18 chrX 132297288 132297629 -34352667 - Lx8 LINE L1 -326 7147 6775 4 1594 2552 76 31 0 chrX 132297629 132297946 -34352350 - ORR1A2 LTR MaLR 0 327 1 4 1594 1765 247 128 18 chrX 132297946 132298149 -34352147 - Lx8 LINE L1 -699 6774 6543 4 1594 513 317 18 36 chrX 132298190 132298357 -34351939 + RSINE1 SINE B4 2 165 0 4 1594 312 248 105 44 chrX 132298405 132298519 -34351777 - L1M4 LINE L1 -1526 4620 4500 4 1594 356 314 68 0 chrX 132298539 132298657 -34351639 - B1F SINE Alu -6 143 18 4 1594 553 301 5 35 chrX 132298684 132298884 -34351412 - L1M4 LINE L1 -1778 4368 4175 4 1594 423 300 10 0 chrX 132298886 132298986 -34351310 - PB1D10 SINE Alu -8 109 9 4 1594 672 222 84 30 chrX 132298900 132299067 -34351229 - ID_B1 SINE B4 -48 176 1 4 1594 360 0 0 0 chrX 132299085 132299125 -34351171 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1594 522 188 229 161 chrX 132299142 132299287 -34351009 - B3A SINE B2 -33 160 2 4 1594 636 271 18 54 chrX 132299315 132299592 -34350704 - L1M4 LINE L1 -1986 4160 3894 4 1594 27 0 0 0 chrX 132299904 132299931 -34350365 + AT_rich Low_complexity Low_complexity 1 27 0 4 1594 231 267 0 32 chrX 132299988 132300050 -34350246 + RMER21A LTR ERV1 594 653 -294 4 1594 291 28 0 0 chrX 132300105 132300141 -34350155 + (TTG)n Simple_repeat Simple_repeat 2 37 0 4 1594 363 260 51 20 chrX 132300307 132300405 -34349891 - RSINE1 SINE B4 -45 120 20 4 1594 560 328 66 40 chrX 132301188 132301397 -34348899 - LTR52 LTR ERVL -36 385 176 4 1594 188 0 0 69 chrX 132301397 132301426 -34348870 + (TTGG)n Simple_repeat Simple_repeat 3 29 0 4 1594 560 328 66 40 chrX 132301426 132301518 -34348778 - LTR52 LTR ERVL -246 175 76 4 1594 474 196 0 0 chrX 132302012 132302114 -34348182 + (CATA)n Simple_repeat Simple_repeat 2 103 0 4 1594 286 309 104 21 chrX 132302607 132302686 -34347610 - RSINE1 SINE B4 -59 106 28 4 1594 351 0 0 0 chrX 132302686 132302725 -34347571 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1594 286 309 104 21 chrX 132302725 132302741 -34347555 - RSINE1 SINE B4 -138 27 3 4 1594 460 124 33 11 chrX 132302755 132302845 -34347451 + C-rich Low_complexity Low_complexity 4 95 0 4 1594 395 292 37 12 chrX 132302936 132303099 -34347197 + L1M4 LINE L1 5273 5439 -739 4 1594 340 280 0 0 chrX 132303545 132303638 -34346658 + L1M4 LINE L1 5488 5580 -604 4 1594 620 80 0 0 chrX 132303754 132303842 -34346454 - L1_Mus3 LINE L1 -6 6632 6545 4 1594 259 213 49 0 chrX 132303845 132303906 -34346390 + L1MD LINE L1 5530 5593 -766 4 1594 424 281 62 75 chrX 132303927 132303953 -34346343 - ID_B1 SINE B4 -1 223 207 4 1594 3313 63 5 2 chrX 132303953 132304352 -34345944 - MTB LTR MaLR 0 400 1 4 1594 424 281 62 75 chrX 132304352 132304471 -34345825 - ID_B1 SINE B4 -18 206 80 4 1594 685 214 222 26 chrX 132304945 132305175 -34345121 - MTD LTR MaLR 0 419 145 4 1594 2370 210 113 24 chrX 132305111 132305658 -34344638 - RMER20B LTR ERVK -22 605 10 4 1594 604 221 268 15 chrX 132305653 132305851 -34344445 - MTD LTR MaLR -173 248 1 4 1594 1933 260 106 24 chrX 132306140 132306186 -34344110 - L1MB3 LINE L1 -2 6181 6144 4 1594 3654 28 2 0 chrX 132306186 132306581 -34343715 - MTA_Mm LTR MaLR 0 396 1 4 1594 9995 27 0 1 chrX 132306581 132307680 -34342616 - MTA_Mm-int LTR MaLR 0 1098 1 4 1594 3563 23 23 0 chrX 132307680 132308067 -34342229 - MTA_Mm LTR MaLR 0 396 1 4 1594 1933 260 106 24 chrX 132308067 132308818 -34341478 - L1MB3 LINE L1 -40 6143 5318 4 1594 1138 158 10 52 chrX 132309133 132309405 -34340891 - ORR1A3 LTR MaLR 0 326 1 4 1594 790 266 72 53 chrX 132309407 132309895 -34340401 - L1MB3 LINE L1 -1277 4863 4367 4 1594 330 208 25 25 chrX 132309979 132310058 -34340238 - RSINE1 SINE B4 0 165 87 5 1594 363 301 7 89 chrX 132310090 132310236 -34340060 - B4 SINE B4 -150 142 9 5 1594 722 254 69 36 chrX 132310249 132310612 -34339684 - L1MB3 LINE L1 -1839 4301 3927 4 1594 1159 192 141 0 chrX 132310611 132310902 -34339394 + Lx9 LINE L1 7313 7644 0 5 1594 484 307 93 24 chrX 132311238 132311604 -34338692 - L1MB3 LINE L1 -2229 3917 3550 4 1594 580 205 55 47 chrX 132311624 132311752 -34338544 - B1_Mur3 SINE Alu -15 134 6 5 1594 544 229 86 5 chrX 132311765 132311963 -34338333 - L1MB3 LINE L1 -2629 3511 3298 4 1594 586 318 57 27 chrX 132312006 132312358 -34337938 + RMER10A LTR ERVL 46 417 -25 5 1594 308 276 171 47 chrX 132312374 132312632 -34337664 - L1MD LINE L1 -2840 3306 3017 5 1594 947 37 388 0 chrX 132312676 132312810 -34337486 - B2_Mm1a SINE B2 -7 186 1 5 1594 334 299 44 97 chrX 132312960 132313186 -34337110 - L1MCa LINE L1 -3056 3265 3052 5 1594 511 272 38 34 chrX 132313186 132313422 -34336874 - L1MC LINE L1 -3308 2838 2602 5 1594 249 260 39 37 chrX 132313426 132313514 -34336782 - B1_Mur1 SINE Alu 0 149 29 5 1594 1648 193 17 124 chrX 132313514 132313981 -34336315 + Lx9 LINE L1 7200 7616 -28 5 1594 1640 210 47 42 chrX 132313980 132314523 -34335773 + L1_Rod LINE L1 3114 3689 -2191 5 1594 386 294 149 23 chrX 132314615 132314789 -34335507 - B4A SINE B4 -96 196 1 5 1594 274 224 48 48 chrX 132314789 132314892 -34335404 - L1MCa LINE L1 -3898 2423 2321 5 1594 811 244 40 6 chrX 132314896 132315073 -34335223 + B3A SINE B2 1 183 -15 5 1594 666 304 158 22 chrX 132315110 132315841 -34334455 - L1MCa LINE L1 -4194 2314 1485 5 1594 636 308 64 21 chrX 132315924 132316196 -34334100 + B4 SINE B4 9 284 -8 5 1594 333 0 0 0 chrX 132316199 132316236 -34334060 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1594 363 60 0 0 chrX 132316236 132316286 -34334010 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1594 305 196 0 0 chrX 132316324 132316380 -34333916 + L1MA8 LINE L1 5499 5554 -758 5 1594 2000 221 84 42 chrX 132316403 132316720 -34333576 - RMER15 LTR ERVL -2 573 235 5 1594 2958 63 40 99 chrX 132316720 132316790 -34333506 - MTB LTR MaLR 0 400 348 5 1594 1540 55 16 0 chrX 132316790 132316972 -34333324 + B2_Mm2 SINE B2 4 188 -7 5 1594 2958 63 40 99 chrX 132316972 132316994 -34333302 - MTB LTR MaLR -53 347 347 5 1594 1215 70 0 0 chrX 132316994 132317137 -34333159 + B1_Mus1 SINE Alu 1 143 -5 5 1594 2958 63 40 99 chrX 132317137 132317468 -34332828 - MTB LTR MaLR -53 347 1 5 1594 2000 221 84 42 chrX 132317468 132317675 -34332621 - RMER15 LTR ERVL -341 234 27 5 1594 264 185 103 44 chrX 132317711 132317779 -34332517 - RMER15 LTR ERVL -503 72 1 5 1594 537 252 196 25 chrX 132317779 132318201 -34332095 + L1MA8 LINE L1 5646 6142 -149 5 1594 301 333 9 26 chrX 132318329 132318443 -34331853 + PB1D10 SINE Alu 1 112 -5 5 1594 306 0 0 0 chrX 132318446 132318480 -34331816 + (CAGA)n Simple_repeat Simple_repeat 2 35 0 5 1594 711 0 0 0 chrX 132318506 132318585 -34331711 + (GGAAA)n Simple_repeat Simple_repeat 2 80 0 5 1594 2210 138 79 52 chrX 132320498 132320866 -34329430 - ORR1C1 LTR MaLR 0 378 1 5 1594 6502 147 212 16 chrX 132320866 132322128 -34328168 - ORR1C1-int LTR MaLR 0 1509 1 5 1594 1966 183 28 68 chrX 132322128 132322522 -34327774 - ORR1C1 LTR MaLR 0 378 1 5 1594 387 301 127 20 chrX 132322748 132322992 -34327304 - L2a LINE L2 -23 3403 3134 5 1594 198 0 0 0 chrX 132322993 132323015 -34327281 + (AAATG)n Simple_repeat Simple_repeat 4 25 0 5 1594 237 255 107 88 chrX 132323246 132323405 -34326891 - L2a LINE L2 -488 2931 2770 5 1594 980 199 47 20 chrX 132323405 132323664 -34326632 + ORR1B1 LTR MaLR 1 328 -66 5 1594 3176 132 65 40 chrX 132323684 132324266 -34326030 - RMER6-int LTR ERVK -2 3175 2579 5 1594 307 170 75 0 chrX 132324266 132324319 -34325977 - LSU-rRNA_Hsa rRNA rRNA -3198 1837 1781 5 1594 3681 155 26 10 chrX 132324320 132324938 -34325358 - RMER6-int LTR ERVK -2543 634 7 5 1594 846 149 64 0 chrX 132324966 132325107 -34325189 - RMER6A LTR ERVK 0 756 607 5 1594 237 324 35 35 chrX 132325107 132325248 -34325048 - L2a LINE L2 -1534 1885 1745 5 1594 779 265 93 101 chrX 132325262 132325608 -34324688 - L1MC1 LINE L1 -14 6319 5978 5 1594 479 288 70 97 chrX 132325608 132325835 -34324461 - ID_B1 SINE B4 -2 222 2 5 1594 779 265 93 101 chrX 132325835 132325916 -34324380 - L1MC1 LINE L1 -356 5977 5895 5 1594 1839 169 51 57 chrX 132325951 132326321 -34323975 - ORR1C1 LTR MaLR 0 378 11 5 1594 451 314 33 8 chrX 132326321 132326443 -34323853 - RSINE1 SINE B4 -37 128 4 5 1594 558 240 19 70 chrX 132327501 132327658 -34322638 - B1F2 SINE Alu 0 149 1 5 1594 244 299 112 61 chrX 132327863 132328059 -34322237 - ORR1D1 LTR MaLR -11 363 158 5 1594 306 0 0 0 chrX 132329225 132329259 -34321037 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1594 538 300 118 50 chrX 132329275 132329615 -34320681 - MLT1D LTR MaLR -15 490 128 5 1594 406 150 52 0 chrX 132329825 132329978 -34320318 + (CA)n Simple_repeat Simple_repeat 1 161 0 5 1594 189 0 0 0 chrX 132337515 132337536 -34312760 + (ATG)n Simple_repeat Simple_repeat 3 23 0 5 1594 443 252 145 7 chrX 132338479 132338631 -34311665 + B4A SINE B4 4 176 -116 5 1594 2172 176 85 28 chrX 132338809 132339396 -34310900 + RMER1B Other Other 20 1051 -15 5 1594 1015 130 0 0 chrX 132339512 132339658 -34310638 + B1_Mur4 SINE Alu 5 150 0 5 1594 578 69 0 198 chrX 132339668 132339794 -34310502 + B2_Mm2 SINE B2 2 102 -93 5 1594 195 42 0 0 chrX 132340096 132340120 -34310176 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1594 1045 73 0 7 chrX 132340120 132340257 -34310039 - B1_Mus2 SINE Alu -10 137 2 5 1594 854 299 68 56 chrX 132340842 132341223 -34309073 + L1M4c LINE L1 903 1266 -5118 5 1594 3447 28 2 0 chrX 132341223 132341618 -34308678 + MTA_Mm LTR MaLR 1 396 0 5 1594 854 299 68 56 chrX 132341618 132342113 -34308183 + L1M4c LINE L1 1267 1790 -4594 5 1594 1257 20 0 0 chrX 132342513 132342659 -34307637 + B1_Mm SINE Alu 2 147 0 5 1594 255 93 0 0 chrX 132342659 132342702 -34307594 + (A)n Simple_repeat Simple_repeat 1 43 0 5 1594 456 19 0 0 chrX 132342796 132342849 -34307447 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 1594 469 266 183 19 chrX 132342907 132343874 -34306422 + L1M4c LINE L1 2556 3692 -2684 5 1594 1127 202 150 68 chrX 132343898 132343988 -34306308 + ORR1D2 LTR MaLR 4 81 -289 5 1594 3782 69 57 8 chrX 132343988 132344483 -34305813 - MURVY-LTR LTR ERV1 0 519 1 5 1594 1127 202 150 68 chrX 132344483 132344731 -34305565 + ORR1D2 LTR MaLR 82 370 0 5 1594 659 314 42 12 chrX 132344735 132345052 -34305244 + ORR1D2-int LTR MaLR 977 1224 -356 5 1594 474 292 0 42 chrX 132345046 132345189 -34305107 + ORR1D-int LTR MaLR 171 307 -1063 5 1594 1929 205 105 56 chrX 132345180 132345713 -34304583 + ORR1D-int LTR MaLR 812 1370 0 5 1594 1664 258 20 0 chrX 132345778 132346216 -34304080 + L1_Mur3 LINE L1 5355 5801 -79 5 1594 498 308 98 25 chrX 132346450 132346611 -34303685 + L1M4c LINE L1 3915 4085 -2291 5 1594 1349 92 16 0 chrX 132346611 132346795 -34303501 - B2_Mm2 SINE B2 -6 189 3 5 1594 498 308 98 25 chrX 132346795 132347385 -34302911 + L1M4c LINE L1 4086 4721 -1655 5 1594 554 0 15 0 chrX 132347388 132347454 -34302842 + (GA)n Simple_repeat Simple_repeat 2 68 0 5 1594 496 261 20 28 chrX 132347454 132347636 -34302660 + B3 SINE B2 5 185 -13 5 1594 206 160 20 0 chrX 132347647 132347697 -34302599 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 1594 547 322 4 0 chrX 132347720 132347947 -34302349 - L1MA4 LINE L1 -364 5936 5709 5 1594 676 284 48 11 chrX 132347946 132348320 -34301976 - L1_Mur3 LINE L1 -2340 3540 3153 5 1594 666 133 200 0 chrX 132348408 132348528 -34301768 - B1_Mus1 SINE Alu 0 148 5 5 1594 1008 197 32 5 chrX 132348866 132349085 -34301211 + Lx6 LINE L1 6343 6567 -893 5 1594 228 35 0 0 chrX 132349206 132349235 -34301061 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 1594 225 0 0 0 chrX 132349357 132349382 -34300914 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 1594 27 0 0 0 chrX 132349472 132349499 -34300797 + AT_rich Low_complexity Low_complexity 1 27 0 5 1594 3014 120 66 61 chrX 132349600 132350204 -34300092 + L1_Mus3 LINE L1 6014 6620 -18 5 1594 272 91 23 0 chrX 132350262 132350306 -34299990 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1594 41 21 0 0 chrX 132350310 132350358 -34299938 + AT_rich Low_complexity Low_complexity 1 48 0 5 1594 451 193 32 41 chrX 132350382 132350595 -34299701 + (TA)n Simple_repeat Simple_repeat 1 211 0 5 1594 826 92 0 15 chrX 132350595 132350727 -34299569 + Lx LINE L1 6518 6647 -7 5 1594 326 177 52 15 chrX 132350727 132351018 -34299278 + (TA)n Simple_repeat Simple_repeat 1 301 0 5 1594 297 133 77 18 chrX 132351072 132351241 -34299055 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 1594 363 232 44 12 chrX 132351286 132351634 -34298662 + (TA)n Simple_repeat Simple_repeat 1 359 0 5 1594 405 39 0 0 chrX 132351638 132351689 -34298607 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 5 1594 2319 148 112 39 chrX 132351705 132352252 -34298044 + RLTR25A LTR ERVK 3 679 -424 5 1594 2306 196 82 12 chrX 132352252 132352743 -34297553 + Lx6 LINE L1 6936 7460 0 5 1594 3969 104 7 2 chrX 132353461 132354031 -34296265 + RLTR22_Mur LTR ERVK 3 575 -1273 5 1594 228 360 87 69 chrX 132354153 132354371 -34295925 + RMER12 LTR ERVK 1101 1322 0 5 1594 26 64 0 0 chrX 132355021 132355068 -34295228 + AT_rich Low_complexity Low_complexity 1 47 0 5 1594 460 299 0 41 chrX 132355868 132356039 -34294257 + RSINE1 SINE B4 2 165 0 5 1594 21 0 0 0 chrX 132356074 132356095 -34294201 + AT_rich Low_complexity Low_complexity 1 21 0 5 1594 1208 108 11 0 chrX 132356600 132356776 -34293520 + B2_Mm1t SINE B2 2 179 -14 5 1594 542 310 100 19 chrX 132357430 132357910 -34292386 - L1M2 LINE L1 -2985 3158 2640 5 1594 492 229 112 21 chrX 132357931 132358000 -34292296 - Lx6 LINE L1 -1300 6160 6092 5 1594 318 50 0 0 chrX 132358000 132358040 -34292256 + (TC)n Simple_repeat Simple_repeat 1 40 0 5 1594 492 229 112 21 chrX 132358040 132358157 -34292139 - Lx6 LINE L1 -1369 6091 5957 5 1594 278 276 41 0 chrX 132358156 132358254 -34292042 - L1_Mur3 LINE L1 -3269 2611 2510 5 1594 9725 144 39 105 chrX 132358264 132359329 -34290967 - L1_Mur3 LINE L1 -1144 4736 3696 5 1594 1207 41 0 7 chrX 132359329 132359477 -34290819 - B1_Mus2 SINE Alu 0 147 1 5 1594 9725 144 39 105 chrX 132359477 132359582 -34290714 - L1_Mur3 LINE L1 -2185 3695 3594 5 1594 837 46 0 0 chrX 132359582 132359691 -34290605 + B1_Mus2 SINE Alu 39 147 0 5 1594 9725 144 39 105 chrX 132359691 132360878 -34289418 - L1_Mur3 LINE L1 -2185 3593 2433 5 1594 2098 261 33 18 chrX 132360883 132361557 -34288739 - L1_Mur3 LINE L1 -6993 735 52 5 1594 234 288 8 67 chrX 132361572 132361706 -34288590 + L1MA6 LINE L1 5806 5931 -369 5 1594 243 0 0 0 chrX 132361707 132361734 -34288562 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1594 21 57 0 0 chrX 132362520 132362555 -34287741 + AT_rich Low_complexity Low_complexity 1 35 0 5 1594 209 336 0 51 chrX 132364606 132364744 -34285552 + A-rich Low_complexity Low_complexity 3 133 0 5 1594 415 272 0 42 chrX 132364800 132364896 -34285400 + RSINE1 SINE B4 2 93 -72 5 1594 498 244 40 30 chrX 132365159 132365348 -34284948 + B3A SINE B2 2 195 0 5 1594 1457 181 56 7 chrX 132365479 132365763 -34284533 - ORR1C2 LTR MaLR 0 384 87 5 1594 497 184 5 17 chrX 132365771 132365879 -34284417 - ORR1C2 LTR MaLR -236 134 29 5 1594 300 240 135 40 chrX 132366012 132366138 -34284158 + HAL1-3A_ME LINE L1 1977 2114 -744 5 1594 995 250 0 0 chrX 132366287 132366503 -34283793 + B3 SINE B2 1 216 0 5 1594 336 208 0 47 chrX 132366544 132366650 -34283646 - Lx8 LINE L1 -3 7470 7370 5 1594 889 333 75 85 chrX 132366703 132366831 -34283465 - Lx9 LINE L1 -2 7471 7361 5 1594 899 239 35 5 chrX 132366831 132367033 -34283263 - B3 SINE B2 -7 209 2 6 1594 1831 277 94 41 chrX 132367033 132367556 -34282740 - Lx9 LINE L1 -171 7473 6862 5 1594 234 62 0 0 chrX 132367556 132367588 -34282708 + (TCTG)n Simple_repeat Simple_repeat 1 32 0 6 1594 1831 271 96 35 chrX 132367588 132367663 -34282633 - Lx9 LINE L1 -636 7008 6926 5 1594 200 34 0 33 chrX 132367663 132367693 -34282603 + (TA)n Simple_repeat Simple_repeat 2 30 0 6 1594 636 14 0 0 chrX 132367693 132367765 -34282531 + (TG)n Simple_repeat Simple_repeat 2 74 0 6 1594 1831 271 96 35 chrX 132367765 132368009 -34282287 - Lx9 LINE L1 -719 6925 6639 5 1594 443 291 0 0 chrX 132368009 132368119 -34282177 - Lx9 LINE L1 -1146 6498 6389 5 1594 309 26 0 0 chrX 132368689 132368727 -34281569 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1594 612 234 108 10 chrX 132368830 132369007 -34281289 - B3A SINE B2 -4 191 1 6 1594 5301 210 71 29 chrX 132369104 132369283 -34281013 - Lx7 LINE L1 -5 7691 7512 6 1594 1344 87 5 0 chrX 132369283 132369468 -34280828 + B2_Mm1t SINE B2 2 187 -6 6 1594 5301 205 69 27 chrX 132369468 132370347 -34279949 - Lx7 LINE L1 -185 7511 6598 6 1594 2753 62 69 13 chrX 132370347 132370723 -34279573 - MTB LTR MaLR -1 399 3 6 1594 5301 205 69 27 chrX 132370723 132370995 -34279301 - Lx7 LINE L1 -1099 6597 6326 6 1594 890 238 14 5 chrX 132371455 132371666 -34278630 + B3 SINE B2 1 213 -3 6 1594 480 336 75 71 chrX 132371817 132371854 -34278442 - MLT1D LTR MaLR -21 484 455 6 1594 1180 41 0 14 chrX 132371854 132372002 -34278294 + B1_Mus1 SINE Alu 2 147 -1 6 1594 480 336 75 71 chrX 132372002 132372403 -34277893 - MLT1D LTR MaLR -51 454 45 6 1594 345 207 0 0 chrX 132372891 132372978 -34277318 + CT-rich Low_complexity Low_complexity 2 88 0 6 1594 602 144 245 7 chrX 132379692 132379839 -34270457 + URR1A DNA MER1_type 6 187 -39 6 1594 235 319 78 18 chrX 132379882 132380048 -34270248 - RLTR21 LTR ERVK -315 1257 1082 6 1594 635 185 14 7 chrX 132380382 132380529 -34269767 + L1MB4 LINE L1 6031 6178 -2 6 1594 333 198 0 0 chrX 132381354 132381470 -34268826 + CT-rich Low_complexity Low_complexity 1 116 0 6 1594 3550 42 0 0 chrX 132381785 132382211 -34268085 + L1Md_T LINE L1 6157 6582 0 6 1594 22 0 0 0 chrX 132382298 132382320 -34267976 + AT_rich Low_complexity Low_complexity 1 22 0 6 1595 182 62 31 0 chrX 132383317 132383349 -34266947 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 6 1595 1170 62 7 0 chrX 132383349 132383495 -34266801 - B1_Mm SINE Alu 0 147 1 6 1595 1013 362 71 41 chrX 132383559 132383946 -34266350 - MER21B LTR ERV1 -149 714 329 6 1595 1865 95 4 4 chrX 132383946 132384221 -34266075 - L1_Mus4 LINE L1 0 6636 6362 6 1595 1013 362 71 41 chrX 132384221 132384374 -34265922 - MER21B LTR ERV1 -535 328 164 6 1595 287 25 0 24 chrX 132384374 132384415 -34265881 + (TTTG)n Simple_repeat Simple_repeat 4 43 0 6 1595 1013 362 71 41 chrX 132384415 132384504 -34265792 - MER21B LTR ERV1 -700 163 67 6 1595 4120 33 4 0 chrX 132384852 132385332 -34264964 - LTRIS_Mm LTR ERV1 0 482 1 6 1595 273 253 32 117 chrX 132385346 132385440 -34264856 + MER21B LTR ERV1 18 103 -760 6 1595 1154 43 28 0 chrX 132385620 132385761 -34264535 + B1_Mus2 SINE Alu 1 145 -2 6 1595 266 333 105 53 chrX 132386243 132386414 -34263882 + MER21B LTR ERV1 512 691 -172 6 1595 1531 225 142 33 chrX 132387100 132387137 -34263159 - RLTR20B3 LTR ERVK -56 521 485 6 1595 549 0 0 0 chrX 132387137 132387198 -34263098 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 1595 1531 225 142 33 chrX 132387198 132387588 -34262708 - RLTR20B3 LTR ERVK -93 484 47 6 1595 2748 72 39 24 chrX 132387802 132388213 -34262083 + L1Md_F3 LINE L1 6152 6568 -16 6 1595 8600 102 59 15 chrX 132388424 132388436 -34261860 - Lx3C LINE L1 -7 6969 6962 6 1595 2489 96 32 0 chrX 132388436 132388750 -34261546 - ORR1A2 LTR MaLR -3 324 1 6 1595 8600 96 33 15 chrX 132388750 132390607 -34259689 - Lx3C LINE L1 -15 6961 5055 6 1595 35 54 0 0 chrX 132390676 132390732 -34259564 + AT_rich Low_complexity Low_complexity 1 56 0 6 1595 436 275 18 0 chrX 132390884 132390993 -34259303 - Lx7 LINE L1 -389 7307 7197 6 1595 234 0 0 0 chrX 132391040 132391066 -34259230 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 6 1595 6050 204 69 25 chrX 132391076 132391816 -34258480 - Lx6 LINE L1 -170 7290 6509 6 1595 4432 85 2 16 chrX 132391816 132392391 -34257905 - Lx LINE L1 -2 6652 6086 6 1595 6050 204 69 25 chrX 132392391 132392715 -34257581 - Lx6 LINE L1 -952 6508 6172 6 1595 207 100 0 0 chrX 132392715 132392745 -34257551 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1595 516 45 0 0 chrX 132392745 132392811 -34257485 + (GA)n Simple_repeat Simple_repeat 2 68 0 6 1595 6050 204 69 25 chrX 132392811 132393019 -34257277 - Lx6 LINE L1 -1289 6171 5956 6 1595 3070 75 34 3 chrX 132393019 132393407 -34256889 - MTB LTR MaLR 0 400 1 6 1595 7119 105 26 86 chrX 132393407 132394575 -34255721 - MTB-int LTR MaLR 0 1098 1 6 1595 3236 42 42 0 chrX 132394575 132394959 -34255337 - MTB LTR MaLR 0 400 1 6 1595 6050 204 69 25 chrX 132394959 132394983 -34255313 - Lx6 LINE L1 -1505 5955 5935 6 1595 1917 221 63 10 chrX 132394994 132395405 -34254891 + Lx6 LINE L1 7019 7451 -9 6 1595 769 269 177 33 chrX 132395402 132395533 -34254763 - L1MA6 LINE L1 -365 5935 5793 6 1595 315 71 0 0 chrX 132395533 132395575 -34254721 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 6 1595 769 269 177 33 chrX 132395575 132395866 -34254430 - L1MA6 LINE L1 -508 5792 5452 6 1595 591 214 30 8 chrX 132395874 132396006 -34254290 + MTD LTR MaLR 4 138 -281 6 1595 350 240 86 9 chrX 132396007 132396112 -34254184 - L1MA6 LINE L1 -1140 5003 4891 6 1595 423 0 0 0 chrX 132396149 132396196 -34254100 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1595 1104 258 148 50 chrX 132396318 132396901 -34253395 - Lx9 LINE L1 -48 7596 6957 6 1595 2795 217 83 40 chrX 132396901 132397313 -34252983 - Lx9 LINE L1 -1701 5943 5487 6 1595 2294 139 69 13 chrX 132397313 132397692 -34252604 + RLTR9D LTR ERVK 1 400 -3 6 1595 2795 211 76 44 chrX 132397692 132398074 -34252222 - Lx9 LINE L1 -361 5486 5090 6 1595 1799 47 14 0 chrX 132398095 132398306 -34251990 - L1_Mus2 LINE L1 0 6566 6353 6 1595 2610 72 6 0 chrX 132398306 132398639 -34251657 + L1_Mus2 LINE L1 6017 6351 -215 6 1595 2815 190 29 28 chrX 132398635 132399253 -34251043 - Lx9 LINE L1 -739 5108 4490 6 1595 1618 57 0 0 chrX 132399874 132400067 -34250229 + L1Md_T LINE L1 6390 6582 0 6 1595 2974 51 47 78 chrX 132400918 132400938 -34249358 - MURVY-LTR LTR ERV1 -69 450 435 6 1595 2934 73 143 139 chrX 132400938 132401448 -34248848 + RLTR1B LTR ERV1 1 512 0 6 1595 2974 51 47 78 chrX 132401448 132401891 -34248405 - MURVY-LTR LTR ERV1 -85 434 1 6 1595 282 106 0 0 chrX 132401903 132401950 -34248346 + Lx8 LINE L1 7425 7471 -2 6 1595 1199 275 172 14 chrX 132402041 132402542 -34247754 + L1_Rod LINE L1 1449 2041 -3806 6 1595 563 249 0 199 chrX 132402542 132402778 -34247518 + B3A SINE B2 2 190 -8 6 1595 1199 275 172 14 chrX 132402778 132402944 -34247352 + L1_Rod LINE L1 2042 2221 -3626 6 1595 401 276 14 80 chrX 132402947 132403085 -34247211 - Lx9 LINE L1 -486 7158 7030 6 1595 935 156 0 11 chrX 132403088 132403263 -34247033 + CT-rich Low_complexity Low_complexity 4 176 0 6 1595 274 266 0 30 chrX 132403339 132403405 -34246891 + polypyrimidine Low_complexity Low_complexity 4 67 0 6 1595 13478 82 44 18 chrX 132403546 132405783 -34244513 - L1VL2 LINE L1 -628 2987 692 6 1595 487 89 114 0 chrX 132405776 132405855 -34244441 - L1VL2 LINE L1 -6182 153 66 6 1595 508 242 23 15 chrX 132405859 132405989 -34244307 - Lx9 LINE L1 -610 7034 6904 6 1595 1917 289 79 21 chrX 132406241 132407088 -34243208 - Lx9 LINE L1 -704 6940 5885 6 1595 1930 276 57 13 chrX 132407089 132407614 -34242682 + Lx5 LINE L1 6486 7033 -17 6 1595 679 209 28 1 chrX 132407637 132407801 -34242495 - Lx9 LINE L1 -1569 5904 5704 6 1595 1271 286 112 22 chrX 132407791 132407973 -34242323 - L1M2 LINE L1 -1093 5050 4866 6 1595 1630 54 0 0 chrX 132407973 132408157 -34242139 - B2_Mm1t SINE B2 -8 185 2 6 1595 1271 286 112 22 chrX 132408157 132408646 -34241650 - L1M2 LINE L1 -1278 4865 4321 6 1595 2646 161 19 45 chrX 132408644 132409107 -34241189 + Lx5 LINE L1 6268 6718 -332 6 1595 2536 271 32 186 chrX 132409144 132409247 -34241049 - L1_Rod LINE L1 -1579 4301 4204 6 1595 1298 35 0 0 chrX 132409247 132409391 -34240905 - B1_Mus2 SINE Alu -2 145 2 6 1595 2536 271 32 186 chrX 132409391 132409937 -34240359 - L1_Rod LINE L1 -1677 4203 3662 6 1595 198 71 0 0 chrX 132409937 132409965 -34240331 + (TTG)n Simple_repeat Simple_repeat 2 29 0 6 1595 5203 253 48 148 chrX 132409965 132411026 -34239270 - L1_Rod LINE L1 -2219 3661 2921 6 1595 1547 244 84 43 chrX 132411026 132411511 -34238785 - RLTR16 LTR ERVK 0 505 1 6 1595 5203 234 64 109 chrX 132411511 132412211 -34238085 - L1_Rod LINE L1 -2906 2941 2263 6 1595 660 26 0 0 chrX 132412211 132412289 -34238007 + (TTTC)n Simple_repeat Simple_repeat 3 80 0 6 1595 1203 44 0 0 chrX 132412289 132412424 -34237872 - B1_Mus2 SINE Alu -11 136 2 6 1595 5203 234 64 109 chrX 132412424 132412503 -34237793 - L1_Rod LINE L1 -3585 2262 2208 6 1595 1658 36 0 20 chrX 132412503 132412699 -34237597 - B2_Mm1a SINE B2 0 193 2 6 1595 5203 234 64 109 chrX 132412699 132412784 -34237512 - L1_Rod LINE L1 -3640 2207 2124 6 1595 487 117 0 0 chrX 132412784 132412861 -34237435 - 4.5SRNA scRNA scRNA -3 91 15 6 1595 5203 234 64 109 chrX 132412861 132413639 -34236657 - L1_Rod LINE L1 -3640 2123 1347 6 1595 2074 65 38 8 chrX 132413639 132413902 -34236394 + L1Md_F2 LINE L1 6293 6563 -19 6 1595 207 0 0 0 chrX 132413905 132413928 -34236368 + (TAA)n Simple_repeat Simple_repeat 2 24 0 6 1595 5203 234 64 109 chrX 132413928 132414019 -34236277 - L1_Rod LINE L1 -4501 1346 1257 6 1595 2306 268 63 57 chrX 132414447 132414771 -34235525 - Lx8 LINE L1 -322 7151 6816 6 1595 774 146 80 7 chrX 132414771 132414909 -34235387 + B1_Mur4 SINE Alu 1 148 -2 6 1595 2306 268 63 57 chrX 132414909 132415301 -34234995 - Lx8 LINE L1 -658 6815 6431 6 1595 2697 83 3 0 chrX 132415311 132415637 -34234659 - ORR1A2 LTR MaLR 0 327 1 6 1595 10565 141 54 12 chrX 132415637 132416575 -34233721 - ORR1A2-int LTR MaLR 0 1963 1026 6 1595 5650 84 40 1 chrX 132416575 132417315 -34232981 - L1_Mus3 LINE L1 0 6638 5870 6 1595 10565 141 54 12 chrX 132417315 132418260 -34232036 - ORR1A2-int LTR MaLR -938 1025 1 6 1595 2860 59 3 0 chrX 132418260 132418584 -34231712 - ORR1A2 LTR MaLR 0 327 3 6 1595 608 290 124 50 chrX 132419167 132419249 -34231047 - Lx8 LINE L1 -1057 6416 6325 6 1595 1415 165 37 0 chrX 132419249 132419467 -34230829 - URR1A DNA MER1_type 0 226 1 6 1595 608 290 124 50 chrX 132419467 132419682 -34230614 - Lx8 LINE L1 -1149 6324 6097 6 1595 1284 195 0 54 chrX 132422318 132422557 -34227739 + URR1A DNA MER1_type 1 226 0 6 1595 27 62 0 0 chrX 132425806 132425854 -34224442 + AT_rich Low_complexity Low_complexity 1 48 0 6 1595 4686 145 94 3 chrX 132426618 132427381 -34222915 - Lx5 LINE L1 0 7050 6218 6 1595 5372 48 6 13 chrX 132428132 132428766 -34221530 - L1_Mus1 LINE L1 0 6567 5938 6 1595 645 280 157 38 chrX 132429072 132429759 -34220537 - L1MD2 LINE L1 -61 6103 5320 6 1595 483 264 9 9 chrX 132429825 132429936 -34220360 - PB1D7 SINE Alu -9 111 1 6 1595 311 268 194 16 chrX 132429936 132429954 -34220342 - B4 SINE B4 -75 217 66 6 1595 342 306 71 52 chrX 132430162 132430534 -34219762 - L1MD2 LINE L1 -932 5214 4840 6 1595 7972 52 9 8 chrX 132430789 132432052 -34218244 - L1_Mus1 LINE L1 -1 6566 5306 6 1595 584 306 40 63 chrX 132432108 132432371 -34217925 - B4A SINE B4 -30 262 2 6 1595 593 282 80 7 chrX 132432371 132432657 -34217639 - L1MD2 LINE L1 -1383 4763 4457 6 1595 1676 27 6 0 chrX 132432939 132433122 -34217174 + B2_Mm1t SINE B2 2 185 -8 6 1595 1415 170 124 3 chrX 132433391 132433681 -34216615 - ORR1B1 LTR MaLR -69 325 1 6 1595 2502 297 112 23 chrX 132433730 132434499 -34215797 + Lx8 LINE L1 6253 7109 -364 6 1595 1250 48 0 20 chrX 132434499 132434649 -34215647 + B1_Mus1 SINE Alu 2 148 0 6 1595 2502 297 112 23 chrX 132434649 132434995 -34215301 + Lx8 LINE L1 7110 7467 -6 6 1595 180 0 0 0 chrX 132435176 132435196 -34215100 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 1595 256 279 16 0 chrX 132435541 132435602 -34214694 - ID4_ SINE ID -19 64 3 6 1595 207 0 0 0 chrX 132435650 132435673 -34214623 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 6 1595 670 294 10 91 chrX 132436214 132436412 -34213884 + B3A SINE B2 1 182 -16 6 1595 1836 231 97 12 chrX 132436422 132436843 -34213453 + Lx6 LINE L1 6978 7434 -26 6 1595 5022 158 66 25 chrX 132437098 132438547 -34211749 - L1_Mur3 LINE L1 -4064 1816 298 6 1595 343 250 226 19 chrX 132438909 132439064 -34211232 + L1MEc LINE L1 249 435 -5965 6 1595 303 71 0 0 chrX 132439183 132439225 -34211071 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1595 921 218 93 5 chrX 132439512 132439706 -34210590 + B3 SINE B2 1 211 -5 6 1595 3356 67 0 5 chrX 132440410 132440816 -34209480 - L1Md_F2 LINE L1 -3 6579 6176 6 1595 1456 71 43 11 chrX 132440830 132441016 -34209280 - B2_Mm2 SINE B2 -3 192 1 7 1595 233 306 0 0 chrX 132441046 132441118 -34209178 - L1M3f LINE L1 -4135 1193 1122 7 1595 579 92 0 0 chrX 132441163 132441250 -34209046 + (TG)n Simple_repeat Simple_repeat 2 88 0 7 1595 611 60 12 0 chrX 132443644 132443728 -34206568 + (GA)n Simple_repeat Simple_repeat 1 85 0 7 1595 768 22 0 0 chrX 132443825 132443915 -34206381 + (GA)n Simple_repeat Simple_repeat 1 90 0 7 1595 261 0 0 0 chrX 132444068 132444097 -34206199 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7 1595 356 78 0 30 chrX 132444643 132444709 -34205587 + (CAGA)n Simple_repeat Simple_repeat 1 64 0 7 1595 237 132 0 0 chrX 132444737 132444775 -34205521 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 7 1595 3997 193 108 50 chrX 132445132 132445765 -34204531 + RMER12 LTR ERVK 2 666 -656 7 1595 1087 70 14 0 chrX 132445765 132445908 -34204388 - B1_Mus1 SINE Alu 0 148 4 7 1595 3997 204 107 59 chrX 132445908 132446533 -34203763 + RMER12 LTR ERVK 667 1822 -26 7 1595 757 241 83 26 chrX 132446704 132446896 -34203400 - B3 SINE B2 -3 213 11 7 1595 564 331 84 19 chrX 132446954 132447643 -34202653 - L1M4 LINE L1 -1031 5115 4382 7 1595 350 108 0 15 chrX 132447761 132447827 -34202469 + (TG)n Simple_repeat Simple_repeat 1 65 0 7 1595 245 292 0 0 chrX 132447828 132447893 -34202403 + GA-rich Low_complexity Low_complexity 3 67 0 7 1595 1838 186 63 73 chrX 132447906 132448301 -34201995 - MTC LTR MaLR -8 413 23 7 1595 240 317 170 19 chrX 132448288 132448394 -34201902 - RSINE1 SINE B4 -33 132 11 7 1595 3916 169 8 14 chrX 132448538 132449336 -34200960 - Lx6 LINE L1 -586 5291 4499 7 1595 2786 169 11 62 chrX 132449340 132449953 -34200343 + Lx6 LINE L1 5297 5878 -2 7 1595 1460 143 8 23 chrX 132450001 132450259 -34200037 + ORR1A4 LTR MaLR 76 329 0 7 1595 1510 270 43 18 chrX 132450259 132451361 -34198935 + Lx6 LINE L1 5902 7384 -76 7 1595 228 205 76 13 chrX 132451555 132451634 -34198662 + L1M5 LINE L1 5461 5544 -620 7 1595 297 0 0 0 chrX 132451647 132451680 -34198616 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 1595 297 200 65 19 chrX 132452160 132452267 -34198029 + Lx9 LINE L1 7388 7499 -145 7 1595 21 57 0 0 chrX 132452304 132452339 -34197957 + AT_rich Low_complexity Low_complexity 1 35 0 7 1595 1202 48 0 14 chrX 132452362 132452510 -34197786 + B1_Mus2 SINE Alu 1 146 -1 7 1595 423 0 0 0 chrX 132453843 132453890 -34196406 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 1595 288 327 107 107 chrX 132453927 132454208 -34196088 - B4 SINE B4 -11 281 1 7 1595 733 73 9 9 chrX 132454227 132454337 -34195959 + (TTTC)n Simple_repeat Simple_repeat 3 112 0 7 1595 1215 21 7 0 chrX 132454338 132454480 -34195816 - B1_Mm SINE Alu -4 143 1 7 1595 504 221 0 35 chrX 132455031 132455176 -34195120 - RMER1B Other Other -2 1064 925 7 1595 2142 236 181 18 chrX 132455328 132456056 -34194240 - RMER1B Other Other -156 910 64 7 1595 420 243 21 31 chrX 132456343 132456462 -34193834 + B3 SINE B2 34 149 -67 7 1595 304 280 13 0 chrX 132456459 132456534 -34193762 + PB1D10 SINE Alu 16 91 -26 7 1595 1137 83 0 0 chrX 132457386 132457530 -34192766 - B1_Mus2 SINE Alu -2 145 2 7 1595 345 231 0 37 chrX 132457787 132457868 -34192428 - ID4 SINE ID -4 79 2 7 1595 315 122 0 0 chrX 132458128 132458177 -34192119 + (CATA)n Simple_repeat Simple_repeat 1 49 0 7 1595 1279 44 0 0 chrX 132458216 132458375 -34191921 - L1_Mus1 LINE L1 -193 6374 6216 7 1595 1335 74 0 0 chrX 132458375 132458551 -34191745 + L1_Mus1 LINE L1 6386 6561 -6 7 1595 504 59 0 0 chrX 132458551 132458619 -34191677 + (GA)n Simple_repeat Simple_repeat 2 69 0 7 1595 438 158 110 0 chrX 132458722 132458804 -34191492 - B1_Mur2 SINE Alu 0 149 59 7 1595 199 93 0 44 chrX 132458955 132458979 -34191317 + (TTTTTG)n Simple_repeat Simple_repeat 6 28 0 7 1595 624 27 0 0 chrX 132458979 132459053 -34191243 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 7 1595 199 93 0 44 chrX 132459053 132459073 -34191223 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 7 1595 1006 116 7 0 chrX 132459074 132459220 -34191076 - B1_Mus1 SINE Alu -1 147 1 7 1595 827 152 44 22 chrX 132459259 132459441 -34190855 + RMER17B LTR ERVK 183 368 -590 7 1595 765 291 63 6 chrX 132459499 132459865 -34190431 - L1M4 LINE L1 -579 5712 5326 7 1595 430 222 32 43 chrX 132460292 132460468 -34189828 - L1M4 LINE L1 -1140 5000 4838 7 1595 1112 282 50 35 chrX 132460448 132460624 -34189672 + Lx8 LINE L1 5358 5533 -347 7 1595 1609 189 32 51 chrX 132460624 132460998 -34189298 + ORR1D1 LTR MaLR 4 370 -4 7 1595 2468 275 114 30 chrX 132460998 132462241 -34188055 + Lx8 LINE L1 5534 6871 -602 7 1595 733 326 98 3 chrX 132462597 132462902 -34187394 - Lx8 LINE L1 -237 7236 6903 7 1595 930 274 45 50 chrX 132462921 132463031 -34187265 - L1ME2 LINE L1 -276 5888 5784 7 1595 642 303 140 0 chrX 132463031 132463331 -34186965 - MER2 DNA MER2_type -2 343 2 7 1595 930 297 22 26 chrX 132463331 132463801 -34186495 - L1ME2 LINE L1 -396 5783 5311 7 1595 430 327 56 5 chrX 132463873 132464184 -34186112 - L1MB2 LINE L1 -62 6106 5783 7 1595 3209 256 70 26 chrX 132464263 132465275 -34185021 - Lx9 LINE L1 -176 7468 6412 7 1595 264 91 0 0 chrX 132465275 132465319 -34184977 + (T)n Simple_repeat Simple_repeat 1 44 0 7 1595 207 0 0 0 chrX 132465382 132465405 -34184891 + (TC)n Simple_repeat Simple_repeat 2 24 0 7 1595 1413 222 89 18 chrX 132465425 132465920 -34184376 - L1_Rod LINE L1 -844 5003 4474 7 1595 498 231 32 48 chrX 132466116 132466246 -34184050 - ORR1D2 LTR MaLR -14 365 244 7 1595 836 169 31 12 chrX 132466505 132466667 -34183629 + ORR1D1 LTR MaLR 1 165 -209 7 1595 293 240 55 83 chrX 132466805 132466914 -34183382 + MLT1A1 LTR MaLR 299 404 -4 7 1595 324 120 0 0 chrX 132467119 132467169 -34183127 + (TTG)n Simple_repeat Simple_repeat 2 51 0 7 1595 284 306 0 66 chrX 132467647 132467738 -34182558 + Tigger7 DNA MER2_type 952 1036 -1455 7 1595 287 312 28 123 chrX 132467740 132467846 -34182450 + Tigger7 DNA MER2_type 2391 2486 -5 7 1595 201 74 0 0 chrX 132467855 132467882 -34182414 + (TTG)n Simple_repeat Simple_repeat 1 27 0 7 1595 456 67 0 0 chrX 132467893 132467953 -34182343 + (TG)n Simple_repeat Simple_repeat 2 61 0 7 1595 379 152 0 15 chrX 132468209 132468276 -34182020 + ERVL-B4-int LTR ERVL 2022 2087 -3627 7 1595 673 242 90 5 chrX 132468486 132468698 -34181598 - Lx9 LINE L1 -516 7128 6899 7 1595 2129 102 26 0 chrX 132468709 132469013 -34181283 + ORR1A2 LTR MaLR 1 312 -15 7 1595 953 295 73 3 chrX 132469013 132469343 -34180953 - Lx9 LINE L1 -934 6710 6358 7 1595 615 27 0 0 chrX 132469361 132469434 -34180862 + (TA)n Simple_repeat Simple_repeat 1 73 0 7 1595 289 293 10 0 chrX 132470165 132470264 -34180032 - L1M2 LINE L1 -1192 4948 4849 7 1595 361 283 9 9 chrX 132470285 132470399 -34179897 + PB1D10 SINE Alu 1 114 -3 7 1595 305 333 19 57 chrX 132470399 132470558 -34179738 - L1M2 LINE L1 -1294 4849 4697 7 1595 898 149 197 0 chrX 132470703 132470891 -34179405 + URR1B DNA MER1_type 1 225 0 7 1595 300 339 22 39 chrX 132472192 132472370 -34177926 - L1M5 LINE L1 -3574 2572 2398 7 1595 314 320 0 25 chrX 132472494 132472574 -34177722 + B2_Mm1t SINE B2 2 79 -114 7 1595 518 286 10 92 chrX 132472574 132472770 -34177526 + RMER20B LTR ERVK 1 180 -447 7 1595 320 264 84 15 chrX 132472880 132473011 -34177285 + RMER20B LTR ERVK 377 516 0 7 1595 317 229 208 17 chrX 132473011 132473127 -34177169 + B3A SINE B2 71 209 -7 7 1595 651 258 6 25 chrX 132473159 132473318 -34176978 - ID_B1 SINE B4 0 224 69 7 1595 418 353 69 38 chrX 132473450 132473712 -34176584 - MER74A LTR ERVL -274 284 15 7 1595 26336 72 7 8 chrX 132474885 132476070 -34174226 - L1_Mus3 LINE L1 -7 6631 5431 7 1595 1196 36 0 0 chrX 132476070 132476210 -34174086 - B1_Mm SINE Alu -7 140 1 7 1595 26336 112 49 14 chrX 132476210 132476591 -34173705 - L1_Mus3 LINE L1 -453 5430 4927 7 1595 1093 74 0 0 chrX 132476591 132476726 -34173570 + B1_Mus1 SINE Alu 2 136 -12 7 1595 225 0 0 0 chrX 132476726 132476751 -34173545 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 7 1595 26336 112 49 14 chrX 132476751 132478863 -34171433 - L1_Mus3 LINE L1 -957 4926 2820 7 1595 3695 57 21 6 chrX 132478863 132479338 -34170958 - L1_Mus1 LINE L1 0 6567 6086 7 1595 26336 128 43 15 chrX 132479338 132481517 -34168779 - L1_Mus3 LINE L1 -3064 2819 614 7 1595 444 204 86 0 chrX 132481797 132481890 -34168406 + RSINE1 SINE B4 4 104 -61 7 1595 255 61 0 0 chrX 132481891 132481924 -34168372 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1595 660 86 0 0 chrX 132481924 132482028 -34168268 + (GA)n Simple_repeat Simple_repeat 2 106 0 7 1595 566 284 113 0 chrX 132482043 132482237 -34168059 - B3 SINE B2 0 216 1 7 1595 274 304 86 11 chrX 132482341 132482434 -34167862 - LTR79 LTR ERVL -332 195 96 7 1595 2787 96 31 71 chrX 132482712 132483160 -34167136 + RLTR23 LTR ERV1 1 430 0 7 1595 328 336 128 15 chrX 132483764 132483897 -34166399 - B1F SINE Alu -1 148 1 7 1595 4150 88 9 2 chrX 132484202 132484762 -34165534 - LTRIS2 LTR ERV1 0 564 1 7 1595 3753 176 21 25 chrX 132484795 132485514 -34164782 + Lx3C LINE L1 6259 6974 -2 7 1595 942 112 6 12 chrX 132486480 132486642 -34163654 + (TCTCC)n Simple_repeat Simple_repeat 4 164 0 7 1595 570 29 0 0 chrX 132486659 132486727 -34163569 + (TC)n Simple_repeat Simple_repeat 1 68 0 7 1595 902 231 215 29 chrX 132486773 132487085 -34163211 + ORR1D2 LTR MaLR 1 370 0 7 1595 577 232 199 12 chrX 132487242 132487578 -34162718 - L1M3 LINE L1 -1320 4820 4422 7 1595 724 228 162 69 chrX 132487589 132487938 -34162358 - MTD LTR MaLR -14 365 1 7 1595 1587 244 25 17 chrX 132487938 132488418 -34161878 - L1_Mur3 LINE L1 -1481 4399 3916 7 1595 1244 170 101 4 chrX 132488420 132488668 -34161628 + ORR1D1-int LTR MaLR 1099 1370 0 7 1595 586 238 113 4 chrX 132488668 132488914 -34161382 + ORR1D1 LTR MaLR 1 316 -58 7 1595 931 270 70 85 chrX 132488931 132489268 -34161028 - Lx9 LINE L1 -6 7638 7302 7 1595 1702 160 144 6 chrX 132489268 132489595 -34160701 + ORR1D1 LTR MaLR 1 372 -2 7 1595 931 270 70 85 chrX 132489595 132489718 -34160578 - Lx9 LINE L1 -343 7301 7180 7 1595 1411 69 5 5 chrX 132489718 132489908 -34160388 + B2_Mm1t SINE B2 2 191 -2 7 1595 931 270 70 85 chrX 132489908 132490036 -34160260 - Lx9 LINE L1 -465 7179 7058 7 1595 455 185 26 19 chrX 132490405 132490559 -34159737 + (TA)n Simple_repeat Simple_repeat 1 155 0 7 1595 322 283 11 0 chrX 132490559 132490651 -34159645 - Lx7 LINE L1 -2012 5684 5592 7 1595 553 205 18 9 chrX 132490671 132490784 -34159512 + RLTR40 LTR ERVK 2 115 -702 7 1595 1100 72 0 0 chrX 132490785 132490923 -34159373 + B1_Mm SINE Alu 1 138 -9 7 1595 318 26 0 0 chrX 132490923 132490962 -34159334 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 1595 611 178 35 7 chrX 132491015 132491210 -34159086 + Lx4B LINE L1 6700 6996 -62 8 1595 2824 211 50 59 chrX 132491240 132491947 -34158349 + RLTR40 LTR ERVK 108 807 -10 7 1595 549 186 159 0 chrX 132492466 132492579 -34157717 + RMER21A LTR ERV1 1 131 -816 8 1595 521 158 12 0 chrX 132492578 132492660 -34157636 + RMER21A LTR ERV1 752 834 -8 8 1595 561 198 25 17 chrX 132493125 132493243 -34157053 + RMER5 LTR ERV1 398 516 -18 8 1595 1232 48 0 0 chrX 132493887 132494034 -34156262 + B1_Mus2 SINE Alu 1 147 0 8 1595 770 251 65 5 chrX 132494240 132494440 -34155856 + RLTR18B LTR ERVK 1 212 -300 8 1595 241 295 68 62 chrX 132494607 132494914 -34155382 - L1MD LINE L1 -587 5592 5284 8 1595 372 343 55 35 chrX 132494920 132495177 -34155119 - L1MD LINE L1 -877 5269 5008 8 1595 252 0 0 0 chrX 132495200 132495228 -34155068 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 1595 297 0 0 0 chrX 132495228 132495260 -34155036 + (GA)n Simple_repeat Simple_repeat 1 33 0 8 1595 228 330 219 28 chrX 132495320 132495498 -34154798 - B4A SINE B4 -16 276 65 8 1595 475 274 13 50 chrX 132495533 132495790 -34154506 - L1MD LINE L1 -1120 5026 4774 8 1595 25 0 0 0 chrX 132495933 132495958 -34154338 + AT_rich Low_complexity Low_complexity 1 25 0 8 1595 639 307 31 1 chrX 132496448 132496639 -34153657 - B3A SINE B2 -10 206 2 8 1595 242 280 31 171 chrX 132496706 132496835 -34153461 - LTR78 LTR ERV1 -341 963 853 8 1595 231 266 104 31 chrX 132497203 132497366 -34152930 - L1MC4 LINE L1 -938 7104 6930 8 1595 388 296 69 73 chrX 132498691 132498979 -34151317 - L1MC5 LINE L1 -792 7169 6883 8 1595 980 90 0 0 chrX 132499097 132499230 -34151066 - B1_Mus1 SINE Alu -14 134 2 8 1595 1296 226 40 104 chrX 132499383 132499745 -34150551 + MTE2a LTR MaLR 1 345 -34 8 1595 243 0 0 0 chrX 132499745 132499772 -34150524 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 8 1595 1039 75 0 15 chrX 132499772 132499907 -34150389 - B1_Mus2 SINE Alu -13 134 2 8 1595 1296 226 40 104 chrX 132499907 132499948 -34150348 + MTE2a LTR MaLR 346 378 -1 8 1595 1635 268 63 6 chrX 132500118 132500622 -34149674 + Lx8 LINE L1 6585 7117 -356 1 1595 1451 169 82 40 chrX 132500822 132501205 -34149091 - RMER16 LTR ERVK 0 533 1 2 1595 537 281 93 0 chrX 132501205 132501344 -34148952 + B3 SINE B2 63 214 -2 3 1595 236 262 125 10 chrX 132503299 132503403 -34146893 - MIR SINE MIR -45 217 102 4 1595 953 273 29 0 chrX 132504094 132504299 -34145997 + B3 SINE B2 1 211 -5 5 1595 2651 84 3 0 chrX 132504562 132504907 -34145389 - ORR1A1 LTR MaLR 0 346 1 6 1595 512 267 46 7 chrX 132505104 132505255 -34145041 - B3 SINE B2 -5 211 55 7 1595 1234 28 0 0 chrX 132505255 132505399 -34144897 + B1_Mus2 SINE Alu 2 145 -2 8 1595 226 194 0 0 chrX 132505399 132505435 -34144861 + polypurine Low_complexity Low_complexity 1 36 0 9 1595 373 197 0 15 chrX 132505435 132505502 -34144794 - B3 SINE B2 -147 69 4 7 1595 238 304 54 11 chrX 132505585 132505678 -34144618 - MIR SINE MIR -62 146 50 1 1595 1018 252 4 8 chrX 132505743 132505979 -34144317 + Lx6 LINE L1 7200 7434 -26 1 1595 3327 127 29 18 chrX 132506579 132507126 -34143170 + RLTR1D LTR ERV1 37 589 -16 1 1595 958 228 18 9 chrX 132507386 132507612 -34142684 + Lx6 LINE L1 6843 7070 -390 1 1595 266 137 78 0 chrX 132507612 132507663 -34142633 - RLTR25B LTR ERVK -393 635 581 1 1595 4655 159 142 13 chrX 132508103 132509080 -34141216 - RLTR25A LTR ERVK 0 1103 1 1 1595 1014 221 26 78 chrX 132510698 132510900 -34139396 + MTC LTR MaLR 1 205 -216 1 1595 1394 216 14 18 chrX 132510900 132511183 -34139113 + Lx5 LINE L1 6755 7036 -14 1 1595 198 0 0 0 chrX 132511183 132511205 -34139091 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 1 1595 1014 221 26 78 chrX 132511205 132511218 -34139078 + MTC LTR MaLR 206 206 -215 1 1595 741 102 0 0 chrX 132511218 132511326 -34138970 + (GGAA)n Simple_repeat Simple_repeat 4 111 0 1 1595 1014 221 26 78 chrX 132511326 132511378 -34138918 + MTC LTR MaLR 206 255 -166 1 1595 507 45 0 0 chrX 132511445 132511511 -34138785 + (GA)n Simple_repeat Simple_repeat 2 67 0 2 1595 284 319 66 25 chrX 132511589 132511711 -34138585 - MLT1A1 LTR MaLR -278 130 4 2 1595 1234 54 0 0 chrX 132511855 132512002 -34138294 - B1_Mm SINE Alu 0 147 1 2 1595 929 212 53 56 chrX 132512002 132512294 -34138002 + RMER12 LTR ERVK 639 850 -472 2 1595 231 224 20 65 chrX 132512410 132512563 -34137733 + (TTATA)n Simple_repeat Simple_repeat 4 149 0 2 1595 23 54 0 0 chrX 132512566 132512603 -34137693 + AT_rich Low_complexity Low_complexity 1 37 0 2 1595 1221 55 0 0 chrX 132513332 132513478 -34136818 + B1_Mus2 SINE Alu 2 147 0 2 199 1977 225 39 103 chrX 132513490 132514188 -34136108 - RMER12 LTR ERVK -669 653 1 2 1596 318 158 76 24 chrX 132514188 132514241 -34136055 - ORR1D2 LTR MaLR -305 62 1 2 1596 241 185 55 18 chrX 132515030 132515085 -34135211 - MamGypLTR1b LTR Gypsy -626 156 100 2 1596 270 311 30 90 chrX 132515788 132515827 -34134469 - MLT2C2 LTR ERVL -14 546 515 3 1596 309 118 0 0 chrX 132515827 132515878 -34134418 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 1596 270 311 30 90 chrX 132515878 132515972 -34134324 - MLT2C2 LTR ERVL -46 514 421 3 1596 641 148 0 0 chrX 132516042 132516143 -34134153 + Lx9 LINE L1 7313 7413 -231 3 1596 288 0 0 0 chrX 132516145 132516177 -34134119 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1596 283 300 56 0 chrX 132516327 132516417 -34133879 - MLT2C2 LTR ERVL -236 228 134 3 1596 541 215 0 0 chrX 132516435 132516528 -34133768 - B1_Mur3 SINE Alu -50 99 7 3 1596 1419 225 79 9 chrX 132516745 132517063 -34133233 + ORR1D2 LTR MaLR 19 358 -12 3 1596 4767 137 46 22 chrX 132517100 132517931 -34132365 - RMER13A LTR ERVK -9 851 1 3 1596 285 314 157 60 chrX 132518870 132519036 -34131260 - LTR79 LTR ERVL -338 189 8 3 1596 298 260 134 71 chrX 132519190 132519302 -34130994 - PB1D7 SINE Alu 0 120 2 3 1596 2714 207 58 99 chrX 132520147 132520237 -34130059 + RLTR40 LTR ERVK 1 56 -761 3 1596 1581 37 11 0 chrX 132520237 132520426 -34129870 - B2_Mm1t SINE B2 -2 191 1 4 1596 2714 207 58 99 chrX 132520426 132520671 -34129625 + RLTR40 LTR ERVK 57 298 -519 3 1596 459 0 0 0 chrX 132520671 132520722 -34129574 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1596 2714 207 58 99 chrX 132520722 132521215 -34129081 + RLTR40 LTR ERVK 299 796 -21 3 1596 1121 89 0 0 chrX 132521234 132521380 -34128916 - B1_Mm SINE Alu 0 147 2 4 1596 1094 45 25 0 chrX 132521580 132521737 -34128559 + (TG)n Simple_repeat Simple_repeat 2 162 0 4 1596 267 215 22 30 chrX 132522815 132522949 -34127347 + CT-rich Low_complexity Low_complexity 3 135 0 4 1596 705 85 0 0 chrX 132522967 132523073 -34127223 + (TCC)n Simple_repeat Simple_repeat 3 108 0 4 1596 964 73 7 0 chrX 132524073 132524224 -34126072 - RMER17B LTR ERVK -495 463 312 4 1596 213 121 0 0 chrX 132524346 132524379 -34125917 + (TTA)n Simple_repeat Simple_repeat 2 34 0 4 1596 218 264 0 19 chrX 132524686 132524740 -34125556 + CT-rich Low_complexity Low_complexity 2 54 0 4 1596 21 0 0 0 chrX 132524926 132524947 -34125349 + AT_rich Low_complexity Low_complexity 1 21 0 4 1596 23 68 0 0 chrX 132525155 132525199 -34125097 + AT_rich Low_complexity Low_complexity 1 44 0 5 1596 549 30 0 0 chrX 132525734 132525801 -34124495 + (CA)n Simple_repeat Simple_repeat 1 67 0 5 1596 604 277 34 11 chrX 132525810 132525989 -34124307 - Lx8 LINE L1 -151 7322 7140 5 1596 1055 112 0 0 chrX 132526061 132526204 -34124092 - B1_Mur4 SINE Alu -7 143 1 5 1596 469 312 114 43 chrX 132526224 132526646 -34123650 - L1M5 LINE L1 -828 5318 4867 5 1596 323 310 69 16 chrX 132526652 132526984 -34123312 + L1MD LINE L1 4580 4936 -1210 5 1596 246 32 0 0 chrX 132528418 132528449 -34121847 + (CAGC)n Simple_repeat Simple_repeat 2 32 0 5 1596 889 186 107 77 chrX 132530112 132530449 -34119847 - Lx9 LINE L1 0 7644 7298 5 1596 183 80 0 0 chrX 132530454 132530479 -34119817 + (CCA)n Simple_repeat Simple_repeat 1 25 0 5 1596 428 185 45 36 chrX 132530599 132530711 -34119585 + Lx9 LINE L1 5891 6003 -1641 5 1596 2458 222 86 12 chrX 132530899 132531504 -34118792 + Lx9 LINE L1 6331 6980 -664 5 1596 252 170 0 0 chrX 132531508 132531555 -34118741 - MTD LTR MaLR -8 411 365 6 1596 239 297 0 15 chrX 132532699 132532764 -34117532 + ID4_ SINE ID 5 68 -15 6 1596 612 103 17 8 chrX 132532770 132532887 -34117409 + (TCTA)n Simple_repeat Simple_repeat 2 119 0 6 1596 680 170 290 24 chrX 132532950 132533119 -34117177 - B3 SINE B2 -1 215 2 6 1596 3938 39 4 6 chrX 132534303 132534788 -34115508 + L1Md_F2 LINE L1 6099 6582 0 6 1596 244 158 52 17 chrX 132535380 132535438 -34114858 - MTD LTR MaLR 0 419 360 6 1596 546 16 0 0 chrX 132535465 132535528 -34114768 + (TCCC)n Simple_repeat Simple_repeat 3 65 0 6 1596 1231 78 0 16 chrX 132535531 132535714 -34114582 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 6 1596 588 73 0 0 chrX 132535717 132535799 -34114497 + (TCCC)n Simple_repeat Simple_repeat 4 85 0 6 1596 468 0 0 0 chrX 132535799 132535850 -34114446 + (TTTC)n Simple_repeat Simple_repeat 4 55 0 6 1596 873 245 171 96 chrX 132535854 132536038 -34114258 + MTD LTR MaLR 23 204 -215 7 1596 1080 58 65 0 chrX 132536038 132536176 -34114120 - B1_Mm SINE Alu 0 147 1 7 1596 558 43 0 0 chrX 132536177 132536246 -34114050 + (TTTTC)n Simple_repeat Simple_repeat 2 70 0 7 1596 873 245 171 96 chrX 132536246 132536415 -34113881 + MTD LTR MaLR 205 405 -14 7 1596 319 203 41 55 chrX 132536476 132536549 -34113747 - MTD LTR MaLR -150 269 198 6 1596 385 316 74 20 chrX 132537126 132537329 -34112967 - L1M5 LINE L1 -654 5525 5312 7 1596 216 0 0 0 chrX 132537366 132537390 -34112906 + (TGGG)n Simple_repeat Simple_repeat 4 27 0 7 1596 637 323 24 6 chrX 132537391 132537556 -34112740 - B3A SINE B2 -30 168 1 7 1596 413 320 69 10 chrX 132537568 132537770 -34112526 - L1MD LINE L1 -814 5332 5119 7 1596 409 270 80 0 chrX 132537773 132537873 -34112423 - PB1D10 SINE Alu -9 108 1 7 1596 419 257 17 58 chrX 132537957 132538047 -34112249 + PB1D10 SINE Alu 3 91 -26 7 1596 3922 43 15 4 chrX 132538047 132538517 -34111779 + MT2C_Mm LTR ERVL 1 475 0 7 1596 419 257 17 58 chrX 132538517 132538546 -34111750 + PB1D10 SINE Alu 92 117 0 7 1596 645 273 46 11 chrX 132538561 132538797 -34111499 - L1M5 LINE L1 -1141 5005 4724 7 1596 4116 92 16 15 chrX 132538854 132539460 -34110836 - Lx LINE L1 -7 6647 6041 8 1596 359 294 106 5 chrX 132539511 132539709 -34110587 - L1M5 LINE L1 -1419 4727 4510 7 1596 806 145 20 40 chrX 132539820 132539971 -34110325 - B1_Mur3 SINE Alu 0 149 2 8 1596 423 0 0 0 chrX 132540028 132540075 -34110221 + (TATG)n Simple_repeat Simple_repeat 4 50 0 8 1596 207 0 0 0 chrX 132540119 132540142 -34110154 + (TATG)n Simple_repeat Simple_repeat 4 26 0 8 1596 353 275 0 32 chrX 132540169 132540263 -34110033 - B4A SINE B4 -10 282 192 8 1596 1135 58 136 28 chrX 132540441 132540617 -34109679 - B2_Mm2 SINE B2 0 195 1 8 1596 354 236 83 0 chrX 132540842 132540914 -34109382 + PB1D7 SINE Alu 1 78 -42 8 1596 308 342 25 17 chrX 132540991 132541110 -34109186 - Lx8 LINE L1 -172 7301 7182 8 1596 3112 184 81 131 chrX 132541384 132542305 -34107991 + RMER21A LTR ERV1 1 875 -72 8 1596 4763 214 40 14 chrX 132542318 132542763 -34107533 - Lx6 LINE L1 -108 7352 6886 8 1596 513 0 0 0 chrX 132542763 132542820 -34107476 + (TC)n Simple_repeat Simple_repeat 1 57 0 8 1596 4763 214 40 14 chrX 132542820 132543409 -34106887 - Lx6 LINE L1 -575 6885 6292 8 1596 499 296 52 22 chrX 132543533 132543668 -34106628 + B1F1 SINE Alu 1 139 -10 9 1596 360 0 0 0 chrX 132543671 132543711 -34106585 + (CAA)n Simple_repeat Simple_repeat 2 41 0 9 1596 1592 106 0 4 chrX 132543719 132543955 -34106341 + Lx LINE L1 6420 6654 0 9 1596 275 262 35 88 chrX 132543988 132544101 -34106195 + B4A SINE B4 26 132 -160 9 1596 1278 99 0 40 chrX 132544176 132544376 -34105920 - B2_Mm2 SINE B2 -3 192 1 9 1596 216 0 0 0 chrX 132544463 132544487 -34105809 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 9 1596 4627 176 119 4 chrX 132544604 132545557 -34104739 + RMER1B Other Other 2 1063 -3 9 1596 556 328 30 30 chrX 132545586 132545777 -34104519 + B3 SINE B2 2 192 -24 9 1596 2743 50 102 3 chrX 132545777 132546141 -34104155 + MTB LTR MaLR 1 400 0 9 1596 250 321 13 13 chrX 132546387 132546466 -34103830 - MTEa LTR MaLR -14 365 287 9 1596 579 283 63 71 chrX 132546530 132546575 -34103721 - MTEa LTR MaLR -126 253 209 9 1596 306 0 0 0 chrX 132546575 132546609 -34103687 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1596 579 283 63 71 chrX 132546609 132546818 -34103478 - MTEa LTR MaLR -171 208 1 9 1596 7881 3 0 0 chrX 132547098 132548011 -34102285 - L1Md_A LINE L1 0 6582 5670 1 1596 23 54 0 0 chrX 132548423 132548460 -34101836 + AT_rich Low_complexity Low_complexity 1 37 0 1 1596 405 0 0 0 chrX 132548488 132548533 -34101763 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1596 245 314 123 13 chrX 132549623 132549778 -34100518 + RMER15 LTR ERVL 404 575 0 1 1596 441 0 0 0 chrX 132550741 132550790 -34099506 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1596 247 307 197 38 chrX 132550879 132551092 -34099204 + MLT1C LTR MaLR 136 382 -85 1 1596 1621 130 86 4 chrX 132551142 132551420 -34098876 + Lx3C LINE L1 6673 6973 -3 1 1596 673 180 93 8 chrX 132551445 132551574 -34098722 + B1F SINE Alu 9 148 -1 1 1596 600 216 65 36 chrX 132551733 132551901 -34098395 + RLTR11B LTR ERVK 1 173 -280 1 1596 352 166 130 87 chrX 132551944 132552129 -34098167 + RLTR12A LTR ERVK 376 568 0 1 1596 479 293 40 8 chrX 132552222 132552552 -34097744 - L1M2 LINE L1 -4286 2563 2227 1 1596 4380 177 78 18 chrX 132553047 132553975 -34096321 - RLTR13C1 LTR ERVK 0 983 1 1 1596 1197 276 53 19 chrX 132554134 132554603 -34095693 + L1M2 LINE L1 5293 5777 -523 1 1596 285 29 0 0 chrX 132554603 132554637 -34095659 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 1596 2383 190 60 61 chrX 132555076 132555711 -34094585 - Lx7 LINE L1 0 7696 7063 1 1596 216 0 0 0 chrX 132555731 132555755 -34094541 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1596 678 207 161 6 chrX 132555774 132555954 -34094342 - MTD LTR MaLR 0 419 212 1 1596 1102 219 107 13 chrX 132555981 132556291 -34094005 - Lx7 LINE L1 0 7696 7358 1 1596 992 213 55 13 chrX 132556362 132556600 -34093696 - Lx7 LINE L1 -318 7378 7131 1 1596 760 194 110 62 chrX 132556604 132556813 -34093483 - MTD LTR MaLR -196 223 5 1 1596 4929 169 98 15 chrX 132556840 132557933 -34092363 - L1_Mur3 LINE L1 -4444 1436 265 1 1596 310 282 13 13 chrX 132558039 132558118 -34092178 + B3 SINE B2 13 91 -125 1 1596 303 28 0 0 chrX 132558129 132558165 -34092131 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1 1596 1094 120 19 0 chrX 132558165 132558323 -34091973 - B2_Mm2 SINE B2 -33 162 2 1 1596 544 165 0 32 chrX 132558352 132558446 -34091850 + B3 SINE B2 123 213 -3 1 1596 5159 100 12 13 chrX 132558504 132559262 -34091034 + Lx3A LINE L1 5676 6432 -549 1 1596 492 18 0 0 chrX 132559446 132559503 -34090793 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1596 243 0 0 0 chrX 132559503 132559529 -34090767 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1596 519 258 101 26 chrX 132559980 132560207 -34090089 + L1M2 LINE L1 3507 3750 -2393 1 1596 598 296 165 11 chrX 132560422 132560610 -34089686 + MTB LTR MaLR 140 356 -44 1 1596 884 269 37 148 chrX 132560603 132561009 -34089287 - ORR1D2 LTR MaLR -4 366 6 1 1596 2685 129 66 2 chrX 132561066 132561462 -34088834 - MTC LTR MaLR 0 421 1 1 1596 564 65 0 0 chrX 132561733 132561810 -34088486 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 1596 3033 71 5 25 chrX 132562443 132562847 -34087449 - L1_Mus3 LINE L1 -1 6637 6242 1 1596 638 266 62 17 chrX 132563527 132563703 -34086593 - B3 SINE B2 -30 186 3 1 1596 366 306 87 44 chrX 132564167 132564396 -34085900 - L1M5 LINE L1 -1542 4604 4366 1 1596 315 100 0 0 chrX 132564789 132564818 -34085478 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 1596 387 0 0 0 chrX 132564818 132564861 -34085435 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1596 315 100 0 0 chrX 132564861 132564881 -34085415 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 1596 428 293 35 55 chrX 132565113 132565456 -34084840 - L1MC4 LINE L1 -818 7224 6889 1 1596 957 69 125 0 chrX 132566316 132566460 -34083836 + B2_Mm2 SINE B2 3 164 -31 1 1596 735 44 0 0 chrX 132566461 132566552 -34083744 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 1 1596 246 32 0 0 chrX 132567965 132567996 -34082300 + (CAGC)n Simple_repeat Simple_repeat 2 32 0 1 1596 3912 94 52 2 chrX 132569508 132570041 -34080255 + Lx3A LINE L1 6416 6975 -6 1 1596 1016 273 60 23 chrX 132570047 132570447 -34079849 + Lx9 LINE L1 5489 5967 -189 1 1596 393 194 76 49 chrX 132570779 132570937 -34079359 - RMER17C LTR ERVK -133 277 117 1 1596 234 0 0 0 chrX 132570937 132570963 -34079333 + (GA)n Simple_repeat Simple_repeat 2 27 0 1 1596 393 194 76 49 chrX 132570963 132570988 -34079308 - RMER17C LTR ERVK -294 116 89 1 1596 1358 168 175 42 chrX 132570997 132571357 -34078939 + RMER17C LTR ERVK 3 410 0 1 1596 52 64 0 0 chrX 132571542 132571636 -34078660 + AT_rich Low_complexity Low_complexity 1 94 0 1 1596 469 237 121 8 chrX 132572089 132572221 -34078075 + B4A SINE B4 128 274 -18 1 1596 1598 53 0 0 chrX 132572416 132572605 -34077691 - L1_Mus2 LINE L1 -1 6565 6377 1 1596 1087 224 30 4 chrX 132572655 132572888 -34077408 - Lx9 LINE L1 -339 7305 7067 1 1596 309 109 0 0 chrX 132572969 132573015 -34077281 + (A)n Simple_repeat Simple_repeat 1 46 0 1 1596 1756 204 402 2 chrX 132573042 132573540 -34076756 + Lx9 LINE L1 6364 7060 -584 1 1596 849 196 82 0 chrX 132573549 132573707 -34076589 - MT2A LTR ERVL -362 171 1 1 1596 291 199 86 64 chrX 132573707 132573847 -34076449 + L1M2 LINE L1 4681 4823 -1320 1 1596 4152 61 2 4 chrX 132574019 132574510 -34075786 + L1_Mus2 LINE L1 6077 6566 0 1 1596 267 31 0 0 chrX 132574691 132574723 -34075573 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1596 715 204 68 34 chrX 132574750 132574897 -34075399 - B3A SINE B2 -46 152 1 1 1596 645 224 59 47 chrX 132575377 132575546 -34074750 + B3A SINE B2 26 196 -2 1 1596 762 233 0 20 chrX 132575612 132575761 -34074535 - B1_Mur2 SINE Alu -1 148 3 1 1596 204 40 0 0 chrX 132575789 132575814 -34074482 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 1 1596 1014 160 51 25 chrX 132575837 132576113 -34074183 - MTD LTR MaLR -13 406 1 1 1596 687 283 19 0 chrX 132576113 132576272 -34074024 - B3A SINE B2 -25 173 12 1 1596 1034 32 0 0 chrX 132576796 132576921 -34073375 + L1Md_F2 LINE L1 6444 6568 -14 1 1596 2031 197 117 39 chrX 132577010 132577523 -34072773 + RLTR31_Mur LTR ERVK 1 553 0 1 1596 21 0 0 0 chrX 132578275 132578296 -34072000 + AT_rich Low_complexity Low_complexity 1 21 0 1 1596 1811 189 29 0 chrX 132579288 132579600 -34070696 - ORR1C1 LTR MaLR -57 321 1 1 1596 4268 141 44 19 chrX 132579755 132580430 -34069866 - RLTR17 LTR ERVK 0 692 1 1 1596 5416 180 42 22 chrX 132580445 132581440 -34068856 - Lx5 LINE L1 0 7050 6036 1 1596 1237 101 73 0 chrX 132581440 132581618 -34068678 - B2_Mm2 SINE B2 -3 192 2 1 1596 5416 180 42 22 chrX 132581618 132581699 -34068597 - Lx5 LINE L1 -1015 6035 5953 1 1596 415 328 119 72 chrX 132581699 132582018 -34068278 + MTEa LTR MaLR 39 372 -7 1 1596 1020 164 160 0 chrX 132582975 132583188 -34067108 - Lx4B LINE L1 -4 7054 6808 1 1596 501 255 63 9 chrX 132583352 132583463 -34066833 + PB1 SINE Alu 1 117 -10 1 1596 23 54 0 0 chrX 132583567 132583604 -34066692 + AT_rich Low_complexity Low_complexity 1 37 0 1 1596 610 325 39 63 chrX 132585494 132585701 -34064595 - ID_B1 SINE B4 -21 203 2 1 1596 210 374 96 18 chrX 132585820 132585986 -34064310 - L2 LINE L2 -357 3062 2884 1 1596 213 39 0 0 chrX 132586238 132586264 -34064032 + (TAGA)n Simple_repeat Simple_repeat 4 29 0 1 1596 319 310 29 65 chrX 132587360 132587498 -34062798 + MLT1L LTR MaLR 362 494 -116 1 1596 446 342 0 0 chrX 132587823 132587972 -34062324 + B1F SINE Alu 1 149 0 1 1596 523 339 75 38 chrX 132588073 132588392 -34061904 + MLT1A LTR MaLR 4 334 -40 1 1596 589 171 47 14 chrX 132588800 132588948 -34061348 - Lx9 LINE L1 -1 7643 7491 1 1596 603 0 0 0 chrX 132588948 132589015 -34061281 + (TAGA)n Simple_repeat Simple_repeat 1 67 0 1 1596 867 250 57 3 chrX 132589015 132589312 -34060984 - L1M3 LINE L1 -1416 4724 4412 1 1596 1037 205 57 0 chrX 132589302 132589531 -34060765 - L1_Rod LINE L1 -3649 2198 1957 1 1596 1169 214 40 92 chrX 132589571 132589997 -34060299 - L1_Rod LINE L1 -4239 1608 1205 1 1596 8167 70 9 3 chrX 132589977 132591264 -34059032 - L1Md_F2 LINE L1 0 6582 5348 1 1596 1109 82 56 6 chrX 132591264 132591424 -34058872 + B2_Mm2 SINE B2 1 168 -27 1 1596 365 77 0 30 chrX 132591431 132591498 -34058798 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 1 1596 1525 232 52 13 chrX 132591499 132591884 -34058412 - L1Md_F2 LINE L1 -6503 1105 706 1 1596 3755 228 49 97 chrX 132592272 132592788 -34057508 - L1_Rod LINE L1 -144 5703 5224 1 1596 186 43 0 0 chrX 132592788 132592811 -34057485 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1596 3755 228 49 97 chrX 132592811 132593703 -34056593 - L1_Rod LINE L1 -624 5223 4363 1 1596 704 307 53 5 chrX 132593757 132593963 -34056333 + Lx9 LINE L1 6459 6674 -970 1 1596 1686 283 40 11 chrX 132594027 132594581 -34055715 + Lx6 LINE L1 6498 7434 -26 1 1596 490 241 0 9 chrX 132594658 132594767 -34055529 - MER33 DNA MER1_type -203 121 14 1 1596 1348 113 16 11 chrX 132595071 132595259 -34055037 + B2_Mm2 SINE B2 1 189 -6 1 1596 333 331 14 70 chrX 132595317 132595460 -34054836 - MIRb SINE MIR -121 147 13 1 1596 233 119 24 0 chrX 132595541 132595583 -34054713 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 1 1596 180 0 0 0 chrX 132596499 132596519 -34053777 + (CAT)n Simple_repeat Simple_repeat 1 20 0 1 1596 669 299 14 56 chrX 132597530 132597743 -34052553 + B4 SINE B4 24 227 -65 1 1596 938 246 28 38 chrX 132597746 132597957 -34052339 + B3 SINE B2 1 209 -7 1 1596 777 209 8 0 chrX 132597989 132598118 -34052178 + B3 SINE B2 1 130 -86 1 1596 202 292 0 14 chrX 132598216 132598289 -34052007 + (CATA)n Simple_repeat Simple_repeat 1 72 0 1 1596 352 301 39 4 chrX 132598349 132598461 -34051835 - MLT1F2 LTR MaLR -65 495 395 1 1596 1178 221 30 23 chrX 132598475 132598739 -34051557 + MTD LTR MaLR 146 411 -8 2 1596 212 333 130 10 chrX 132598958 132599058 -34051238 - MER5A DNA MER1_type 0 189 78 2 1596 192 40 0 0 chrX 132599374 132599399 -34050897 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 2 1596 1016 45 8 0 chrX 132599401 132599533 -34050763 - B1_Mm SINE Alu -5 142 10 2 1596 422 303 86 50 chrX 132599882 132600160 -34050136 + MTEb LTR MaLR 75 362 -17 2 1596 321 197 0 0 chrX 132602320 132602386 -34047910 + C-rich Low_complexity Low_complexity 42 107 0 2 1596 369 341 93 0 chrX 132603038 132603167 -34047129 + B1F1 SINE Alu 1 141 -8 2 1596 180 271 62 115 chrX 132603555 132603651 -34046645 + L3 LINE CR1 881 971 -3518 2 1596 476 232 16 22 chrX 132604174 132604314 -34045982 + B1F2 SINE Alu 4 147 -2 2 1596 775 247 67 53 chrX 132604320 132604392 -34045904 + L1MA4 LINE L1 3023 3101 -3042 2 1596 244 0 56 0 chrX 132604392 132604428 -34045868 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 1596 775 246 40 164 chrX 132604428 132604765 -34045531 + L1MA4 LINE L1 3102 3369 -2771 2 1596 701 77 19 0 chrX 132604765 132604869 -34045427 + Lx2 LINE L1 6892 6997 0 2 1596 787 273 48 45 chrX 132604869 132605256 -34045040 + L1MA4 LINE L1 3348 3735 -2408 2 1596 246 297 0 73 chrX 132605301 132605410 -34044886 + Lx8 LINE L1 7246 7346 -127 2 1596 23 0 0 0 chrX 132605425 132605448 -34044848 + AT_rich Low_complexity Low_complexity 1 23 0 2 1596 1261 68 0 0 chrX 132605451 132605599 -34044697 + B1_Mus1 SINE Alu 1 148 0 2 1596 402 21 0 0 chrX 132605681 132605728 -34044568 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 1596 797 278 19 33 chrX 132605796 132606107 -34044189 + L1MA4 LINE L1 3917 4255 -1888 2 1596 402 228 52 11 chrX 132606088 132606200 -34044096 + L1MA4 LINE L1 5795 5931 -369 2 1596 313 271 23 12 chrX 132606484 132606570 -34043726 + MLT1B LTR MaLR 280 366 -24 2 1596 576 314 108 40 chrX 132607182 132607580 -34042716 + Lx8 LINE L1 7047 7471 -2 2 1596 846 164 29 0 chrX 132608754 132608894 -34041402 + B1_Mur4 SINE Alu 1 144 -6 2 1596 249 355 50 0 chrX 132608992 132609113 -34041183 - MIR SINE MIR -133 129 3 2 1596 209 231 206 23 chrX 132609573 132609703 -34040593 - MIRb SINE MIR -92 176 15 2 1596 227 164 0 16 chrX 132612994 132613056 -34037240 + Lx3C LINE L1 6915 6975 -1 2 1596 196 216 37 98 chrX 132614152 132614234 -34036062 + L3 LINE CR1 2835 2911 -1578 2 1596 234 231 15 0 chrX 132614270 132614335 -34035961 + L1ME2 LINE L1 5902 5967 -197 2 1596 773 263 14 28 chrX 132616253 132616464 -34033832 + B3 SINE B2 9 216 0 2 1596 1248 34 0 0 chrX 132616528 132616674 -34033622 + B1_Mm SINE Alu 1 146 -1 2 1596 547 269 34 7 chrX 132616709 132616855 -34033441 + RSINE1 SINE B4 4 153 -12 2 1596 585 228 27 7 chrX 132617374 132617520 -34032776 + B1F SINE Alu 1 149 0 2 1596 387 266 42 42 chrX 132617598 132617763 -34032533 + L1MA6 LINE L1 5916 6080 -220 2 1596 397 333 0 107 chrX 132617791 132618016 -34032280 - B3 SINE B2 -15 201 1 2 1596 1215 55 0 0 chrX 132618167 132618312 -34031984 - B1_Mus2 SINE Alu 0 147 3 2 1596 607 299 76 0 chrX 132618345 132618542 -34031754 + ID_B1 SINE B4 2 213 -11 2 1596 338 313 134 14 chrX 132618581 132618798 -34031498 + L1M5 LINE L1 2390 2632 -3514 2 1596 381 275 0 149 chrX 132618802 132618909 -34031387 + PB1 SINE Alu 4 94 -33 2 1596 570 29 0 0 chrX 132618943 132619011 -34031285 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 1596 180 0 0 0 chrX 132620279 132620299 -34029997 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1596 209 83 0 27 chrX 132620380 132620417 -34029879 + (GGAGA)n Simple_repeat Simple_repeat 2 37 0 2 1596 543 74 0 0 chrX 132620659 132620740 -34029556 + (TC)n Simple_repeat Simple_repeat 1 81 0 2 1596 348 278 16 143 chrX 132620865 132620991 -34029305 - RSINE1 SINE B4 0 165 56 2 1596 362 336 54 20 chrX 132621058 132621207 -34029089 + MLT1A1 LTR MaLR 3 156 -252 2 1596 1201 54 0 0 chrX 132621371 132621518 -34028778 + B1_Mus1 SINE Alu 2 148 0 2 1596 441 0 0 0 chrX 132621928 132621977 -34028319 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 1596 207 69 0 0 chrX 132621977 132622005 -34028291 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1596 1014 252 38 25 chrX 132622423 132622741 -34027555 + Lx9 LINE L1 5399 5720 -127 2 1596 286 95 0 45 chrX 132622781 132622847 -34027449 + (TTTTTG)n Simple_repeat Simple_repeat 1 63 0 2 1596 324 0 0 0 chrX 132622915 132622951 -34027345 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1596 1945 142 72 72 chrX 132622956 132623343 -34026953 - ORR1B1 LTR MaLR -7 387 1 2 1596 1572 271 54 28 chrX 132623347 132623780 -34026516 + Lx9 LINE L1 5746 6189 -1284 2 1596 243 0 0 0 chrX 132623780 132623807 -34026489 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 1596 2374 265 23 14 chrX 132623807 132624474 -34025822 + Lx9 LINE L1 6190 7010 -634 2 1596 257 327 92 18 chrX 132624657 132624766 -34025530 + ORR1E LTR MaLR 4 120 -239 2 1596 434 311 126 11 chrX 132625256 132625438 -34024858 - B3 SINE B2 -13 203 1 2 1596 324 0 0 0 chrX 132625578 132625614 -34024682 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1596 590 313 26 7 chrX 132625614 132625765 -34024531 - B3A SINE B2 -44 154 1 2 1596 324 0 0 0 chrX 132626033 132626069 -34024227 + (TTTTA)n Simple_repeat Simple_repeat 3 38 0 2 1596 696 222 133 16 chrX 132626253 132626441 -34023855 - B3 SINE B2 -5 211 2 2 1596 1119 63 6 19 chrX 132626528 132626690 -34023606 + L1Md_F2 LINE L1 6422 6581 -1 2 1596 445 302 91 38 chrX 132627667 132627877 -34022419 + RMER15 LTR ERVL 342 562 -13 2 1596 582 15 0 0 chrX 132629707 132629774 -34020522 + (GA)n Simple_repeat Simple_repeat 1 67 0 2 1596 1151 75 7 0 chrX 132629883 132630029 -34020267 - B1_Mus1 SINE Alu 0 148 2 2 1596 355 330 123 0 chrX 132631237 132631343 -34018953 + ID_B1 SINE B4 85 203 -21 2 1596 432 0 0 0 chrX 132631985 132632033 -34018263 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1596 398 255 37 26 chrX 132633666 132633782 -34016514 - PB1D10 SINE Alu 0 117 1 2 1596 396 0 0 0 chrX 132633819 132633863 -34016433 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1596 845 324 62 19 chrX 132633864 132634122 -34016174 - B4A SINE B4 -23 269 1 2 1596 226 209 0 0 chrX 132634124 132634167 -34016129 + CT-rich Low_complexity Low_complexity 3 45 0 2 1596 2760 55 0 39 chrX 132634256 132634616 -34015680 - ORR1A1 LTR MaLR 0 346 1 2 1596 13517 57 15 8 chrX 132634616 132636396 -34013900 - ORR1A1-int LTR MaLR 0 1792 1 2 1596 2983 40 0 0 chrX 132636396 132636742 -34013554 - ORR1A1 LTR MaLR 0 346 1 2 1596 891 256 14 33 chrX 132637604 132637779 -34012517 + B3 SINE B2 1 178 -38 2 1596 713 256 189 31 chrX 132637779 132638097 -34012199 + RLTR9A LTR ERVK 1 368 0 2 1596 891 256 14 33 chrX 132638097 132638131 -34012165 + B3 SINE B2 179 206 -10 2 1596 22 0 0 0 chrX 132638131 132638153 -34012143 + AT_rich Low_complexity Low_complexity 1 22 0 2 1596 29 28 0 0 chrX 132638194 132638230 -34012066 + AT_rich Low_complexity Low_complexity 1 36 0 2 1596 194 120 0 57 chrX 132639294 132639347 -34010949 + T-rich Low_complexity Low_complexity 1 50 0 2 1596 266 310 0 0 chrX 132639984 132640055 -34010241 - RSINE1 SINE B4 -93 72 2 2 1596 233 354 12 0 chrX 132641926 132642008 -34008288 - BC1_Mm scRNA scRNA -69 83 1 2 1596 283 289 30 58 chrX 132642123 132642228 -34008068 - PB1 SINE Alu -63 64 1 2 1596 195 302 16 16 chrX 132642270 132642334 -34007962 - MIR SINE MIR -69 193 130 2 1596 30 77 0 0 chrX 132643181 132643246 -34007050 + AT_rich Low_complexity Low_complexity 1 65 0 2 1596 32 26 0 0 chrX 132643266 132643305 -34006991 + AT_rich Low_complexity Low_complexity 1 39 0 2 199 2779 189 15 21 chrX 132644447 132644975 -34005321 - RMER5 LTR ERV1 0 534 10 2 1597 1128 70 7 0 chrX 132645535 132645677 -34004619 + B1_Mus1 SINE Alu 1 143 -5 2 1597 980 110 0 0 chrX 132646104 132646240 -34004056 - B2_Mm2 SINE B2 -52 143 8 2 1597 3037 215 56 87 chrX 132646761 132647684 -34002612 + RMER21B LTR ERV1 3 918 -29 2 1597 394 141 27 40 chrX 132647661 132647735 -34002561 - B1_Mus2 SINE Alu -26 121 49 2 1597 1149 48 0 20 chrX 132647867 132648016 -34002280 + B1_Mus2 SINE Alu 2 147 0 2 1597 180 0 0 0 chrX 132648033 132648053 -34002243 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 1597 286 370 41 35 chrX 132648888 132649059 -34001237 + MER5A DNA MER1_type 18 189 0 2 1597 562 293 40 89 chrX 132649135 132649337 -34000959 + B3 SINE B2 16 207 -9 2 1597 245 231 0 55 chrX 132650895 132650950 -33999346 - B4A SINE B4 -214 78 27 2 1597 390 266 0 31 chrX 132651823 132651920 -33998376 - BC1_Mm scRNA scRNA -58 94 1 2 1597 227 346 38 38 chrX 132651934 132652039 -33998257 - PB1D10 SINE Alu -10 107 3 2 1597 223 160 40 0 chrX 132652051 132652101 -33998195 + T-rich Low_complexity Low_complexity 2 53 0 2 1597 2886 105 109 37 chrX 132653317 132653801 -33996495 - MURVY-LTR LTR ERV1 0 519 1 2 1597 322 262 0 67 chrX 132655145 132655158 -33995138 - PB1D7 SINE Alu 0 120 109 2 1597 195 42 0 0 chrX 132655158 132655182 -33995114 + (TTTC)n Simple_repeat Simple_repeat 3 26 0 2 1597 322 262 0 67 chrX 132655182 132655258 -33995038 - PB1D7 SINE Alu -12 108 37 2 1597 420 20 0 0 chrX 132655258 132655307 -33994989 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1597 2049 163 90 2 chrX 132655427 132655807 -33994489 - ORR1B1 LTR MaLR -7 387 1 2 1597 1514 53 21 0 chrX 132655896 132656083 -33994213 - B2_Mm1t SINE B2 -2 191 1 2 1597 643 278 66 57 chrX 132656173 132656673 -33993623 - L1MB1 LINE L1 -298 5870 5341 2 1597 1077 124 51 0 chrX 132656915 132657093 -33993203 - B2_Mm2 SINE B2 -8 187 1 2 1597 1467 117 165 3 chrX 132657831 132658122 -33992174 - Lx2 LINE L1 -1 6996 6659 2 1597 788 277 48 103 chrX 132658157 132658279 -33992017 - L1_Mur3 LINE L1 -1952 3928 3817 2 1597 656 19 38 28 chrX 132658279 132658385 -33991911 + (TTTTG)n Simple_repeat Simple_repeat 4 110 0 2 1597 1063 66 0 0 chrX 132658385 132658521 -33991775 - B1_Mus1 SINE Alu -12 136 1 3 1597 788 277 48 103 chrX 132658521 132659048 -33991248 - L1_Mur3 LINE L1 -2064 3816 3315 2 1597 756 266 147 48 chrX 132659076 132659463 -33990833 + L1M2 LINE L1 4354 4758 -1385 3 1597 1034 95 0 0 chrX 132659463 132659600 -33990696 + B1_Mus1 SINE Alu 3 139 -9 3 1597 677 63 0 10 chrX 132659600 132659696 -33990600 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 3 1597 756 266 147 48 chrX 132659696 132659931 -33990365 + L1M2 LINE L1 4759 5038 -1105 3 1597 950 184 90 19 chrX 132659932 132660143 -33990153 + URR1A DNA MER1_type 1 226 0 3 1597 334 250 15 95 chrX 132660244 132660258 -33990038 + MT2B LTR ERVL 153 155 -446 3 1597 765 180 0 8 chrX 132660258 132660387 -33989909 + B1_Mur4 SINE Alu 2 129 -21 3 1597 379 283 45 20 chrX 132660387 132660589 -33989707 + L1M2 LINE L1 5158 5364 -779 3 1597 1253 121 0 10 chrX 132660589 132660782 -33989514 + B2_Mm2 SINE B2 2 192 -3 3 1597 427 292 42 0 chrX 132661282 132661402 -33988894 - B1F SINE Alu -1 148 24 3 1597 326 318 88 29 chrX 132661402 132661418 -33988878 - ID_B1 SINE B4 -3 221 78 3 1597 423 0 0 0 chrX 132661439 132661486 -33988810 + (TTG)n Simple_repeat Simple_repeat 2 48 0 3 1597 960 47 84 15 chrX 132661486 132661617 -33988679 - B1_Mus1 SINE Alu -8 140 1 3 1597 218 131 56 28 chrX 132662709 132662780 -33987516 + CT-rich Low_complexity Low_complexity 5 77 0 3 1597 284 333 94 31 chrX 132662780 132662907 -33987389 - B1F SINE Alu -14 135 1 3 1597 1543 42 21 0 chrX 132664088 132664277 -33986019 + B2_Mm2 SINE B2 1 193 -2 3 1597 231 274 63 0 chrX 132664391 132664486 -33985810 - L1MB7 LINE L1 -188 5996 5896 3 1597 700 248 69 29 chrX 132664501 132664705 -33985591 - ID_B1 SINE B4 -8 216 5 3 1597 1055 147 16 5 chrX 132664929 132665114 -33985182 - B2_Mm2 SINE B2 -8 187 1 3 1597 426 333 40 7 chrX 132665130 132665278 -33985018 + MTD LTR MaLR 25 177 -242 3 1597 1939 147 54 23 chrX 132665681 132666141 -33984155 + MT2B LTR ERVL 1 548 -53 3 1597 423 0 0 0 chrX 132666141 132666188 -33984108 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1597 198 0 0 0 chrX 132666188 132666209 -33984087 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 1597 1939 140 12 36 chrX 132666209 132666249 -33984047 + MT2B LTR ERVL 549 581 -20 3 1597 1035 272 88 41 chrX 132666283 132666808 -33983488 + Lx8 LINE L1 5319 5814 -33 3 1597 469 323 121 40 chrX 132667207 132667687 -33982609 + L1_Mur3 LINE L1 1244 1762 -4118 3 1597 542 240 176 0 chrX 132668021 132668146 -33982150 + RSINE1 SINE B4 1 147 -18 3 1597 447 250 30 10 chrX 132668152 132668253 -33982043 + Lx8 LINE L1 6191 6293 -1180 3 1597 558 172 0 0 chrX 132668279 132668436 -33981860 + (CA)n Simple_repeat Simple_repeat 2 158 0 3 1597 700 286 30 75 chrX 132668447 132668647 -33981649 - MTE-int LTR MaLR -778 802 612 3 1597 428 282 60 37 chrX 132668765 132668982 -33981314 + L1MB7 LINE L1 5947 6168 -16 3 1597 1986 219 47 24 chrX 132669058 132669485 -33980811 - Lx5 LINE L1 0 7050 6630 3 1597 421 255 12 15 chrX 132669547 132669670 -33980626 + ID_B1 SINE B4 56 173 -51 3 1597 1091 136 25 61 chrX 132669673 132669869 -33980427 - B2_Mm2 SINE B2 -5 190 2 3 1597 399 41 0 0 chrX 132670101 132670150 -33980146 + (CCCCCT)n Simple_repeat Simple_repeat 2 50 0 3 1597 300 271 23 106 chrX 132670506 132670524 -33979772 + MT2B LTR ERVL 130 147 -454 3 1597 1010 115 155 18 chrX 132670524 132670692 -33979604 + B2_Mm2 SINE B2 5 195 0 3 1597 300 271 23 106 chrX 132670692 132670805 -33979491 + MT2B LTR ERVL 148 249 -352 3 1597 524 191 18 35 chrX 132670713 132670827 -33979469 + PB1D9 SINE Alu 9 120 0 3 1597 2383 109 0 3 chrX 132670893 132671232 -33979064 + ORR1A1 LTR MaLR 1 338 -8 3 1597 330 267 124 22 chrX 132671833 132672059 -33978237 + L1MC5 LINE L1 7406 7654 -307 3 1597 606 183 17 9 chrX 132672726 132672842 -33977454 - PB1D9 SINE Alu -3 117 1 3 1597 799 55 266 0 chrX 132672852 132672961 -33977335 - B1_Mus1 SINE Alu -9 139 2 3 1597 212 308 0 0 chrX 132673158 132673210 -33977086 - B4A SINE B4 -239 53 2 3 1597 21 0 0 0 chrX 132673838 132673859 -33976437 + GC_rich Low_complexity Low_complexity 1 21 0 3 1597 2085 162 107 17 chrX 132675723 132676198 -33974098 + RMER4B LTR ERVK 1 466 0 3 1597 2714 81 19 11 chrX 132676380 132676742 -33973554 + Lx LINE L1 6285 6649 -5 3 1597 300 238 61 24 chrX 132676917 132676999 -33973297 + BC1_Mm scRNA scRNA 15 99 -53 3 1597 1697 142 78 0 chrX 132677015 132677310 -33972986 - ORR1A3 LTR MaLR -8 318 1 3 1597 1275 41 0 0 chrX 132677462 132677607 -33972689 + B1_Mus1 SINE Alu 2 146 -2 3 1597 1095 116 0 0 chrX 132677621 132677767 -33972529 - B1_Mus2 SINE Alu 0 147 2 3 1597 402 74 0 0 chrX 132677800 132677854 -33972442 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 1597 768 275 56 6 chrX 132677854 132678033 -33972263 - B3 SINE B2 -28 188 1 3 1597 21 57 0 0 chrX 132678155 132678190 -33972106 + AT_rich Low_complexity Low_complexity 1 35 0 3 1597 299 292 0 0 chrX 132678328 132678393 -33971903 - ID4 SINE ID -17 66 2 3 1597 410 289 96 7 chrX 132678393 132678529 -33971767 - B1F SINE Alu 0 149 2 3 1597 331 290 172 16 chrX 132678531 132678787 -33971509 - L1M2 LINE L1 -835 5308 5013 3 1597 325 293 81 8 chrX 132678798 132678922 -33971374 - MIR3 SINE MIR -46 162 30 3 1597 501 17 0 0 chrX 132679305 132679363 -33970933 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 1597 369 0 0 0 chrX 132679718 132679759 -33970537 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1597 1098 103 0 0 chrX 132679807 132679952 -33970344 + B1_Mus1 SINE Alu 2 146 -2 3 1597 4636 51 2 0 chrX 132680107 132680640 -33969656 + L1Md_T LINE L1 6049 6582 0 3 1597 423 161 277 11 chrX 132680751 132680845 -33969451 - PB1D9 SINE Alu 0 120 2 3 1597 262 86 0 0 chrX 132681124 132681159 -33969137 - MTEb LTR MaLR -15 364 330 3 1597 1039 103 109 0 chrX 132681419 132681575 -33968721 + B2_Mm1t SINE B2 3 175 -18 3 1597 283 205 58 71 chrX 132682047 132682171 -33968125 + L1M3 LINE L1 5474 5584 -594 3 1597 917 131 0 0 chrX 132682232 132682369 -33967927 + B1_Mus1 SINE Alu 11 147 -1 3 1597 739 206 59 0 chrX 132682459 132682595 -33967701 + RSINE1 SINE B4 3 146 -19 3 1597 24 32 0 0 chrX 132682612 132682643 -33967653 + AT_rich Low_complexity Low_complexity 1 31 0 3 1597 860 293 45 38 chrX 132682673 132682939 -33967357 + B4A SINE B4 12 279 -13 3 1597 1214 61 132 12 chrX 132683448 132683615 -33966681 - B2_Mm2 SINE B2 -8 187 1 3 1597 279 354 20 0 chrX 132684403 132684502 -33965794 - L2a LINE L2 -307 3119 3019 3 1597 392 291 9 43 chrX 132684935 132685050 -33965246 + PB1D7 SINE Alu 1 111 -9 3 1597 437 321 36 0 chrX 132685070 132685210 -33965086 + B1F1 SINE Alu 1 145 -4 3 1597 1297 111 15 36 chrX 132685212 132685408 -33964888 + B2_Mm2 SINE B2 2 193 -2 3 1597 286 407 92 38 chrX 132685489 132685729 -33964567 - LTR78 LTR ERV1 -655 649 397 3 1597 1663 115 74 68 chrX 132686285 132686594 -33963702 - ORR1A4 LTR MaLR -18 311 1 3 1597 1217 124 16 0 chrX 132687495 132687680 -33962616 + L1_Mus3 LINE L1 6451 6638 0 3 1597 208 234 0 0 chrX 132687888 132687935 -33962361 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 3 1597 1646 38 0 21 chrX 132688013 132688203 -33962093 + B2_Mm1t SINE B2 1 186 -7 3 1597 562 272 77 0 chrX 132688340 132688535 -33961761 + L1MC4 LINE L1 6460 6669 -1373 3 1597 2032 79 96 0 chrX 132688967 132689258 -33961038 - ORR1A2 LTR MaLR -8 319 1 3 1597 8182 122 23 20 chrX 132689258 132690599 -33959697 - ORR1A2-int LTR MaLR 0 1963 619 3 1597 332 333 8 0 chrX 132690601 132690718 -33959578 + L1MC4 LINE L1 6727 6844 -1151 3 1597 309 272 159 44 chrX 132690888 132691115 -33959181 + L1MC4 LINE L1 7269 7521 -521 3 1597 232 289 139 36 chrX 132691270 132691464 -33958832 + L1MC4 LINE L1 7562 7775 -267 3 1597 576 381 63 11 chrX 132691565 132691836 -33958460 - MLT1E2 LTR MaLR -24 603 319 3 1597 509 132 176 0 chrX 132691868 132691959 -33958337 + ORR1D1-int LTR MaLR 1264 1370 0 3 1597 1500 250 62 0 chrX 132691959 132692311 -33957985 + ORR1D1 LTR MaLR 1 374 0 3 1597 372 324 92 26 chrX 132692311 132692463 -33957833 - MLT1E2 LTR MaLR -332 295 134 3 1597 417 39 0 0 chrX 132692595 132692646 -33957650 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1597 911 123 204 0 chrX 132692684 132692827 -33957469 + B2_Mm2 SINE B2 1 176 -19 3 1597 201 39 0 0 chrX 132692827 132692853 -33957443 + (CATA)n Simple_repeat Simple_repeat 2 27 0 3 1597 911 123 204 0 chrX 132692853 132692871 -33957425 + B2_Mm2 SINE B2 177 194 -1 3 1597 409 113 0 53 chrX 132693076 132693136 -33957160 + B1_Mur3 SINE Alu 79 138 -11 3 1597 237 65 0 0 chrX 132693136 132693167 -33957129 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1597 409 113 0 53 chrX 132693167 132693181 -33957115 + B1_Mur3 SINE Alu 139 149 0 3 1597 606 282 11 69 chrX 132693237 132693412 -33956884 - B4A SINE B4 -127 165 1 3 1597 333 0 0 0 chrX 132693628 132693665 -33956631 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1597 1369 106 11 11 chrX 132693850 132694041 -33956255 + B2_Mm1t SINE B2 2 192 -1 3 1597 450 139 0 0 chrX 132694207 132694293 -33956003 + (T)n Simple_repeat Simple_repeat 1 86 0 3 1597 2419 60 13 0 chrX 132694740 132695038 -33955258 + L1Md_F2 LINE L1 6281 6582 0 3 1597 24 0 0 0 chrX 132695088 132695112 -33955184 + AT_rich Low_complexity Low_complexity 1 24 0 3 1597 1259 54 7 0 chrX 132695117 132695264 -33955032 + B1_Mus1 SINE Alu 1 148 0 3 1597 230 0 33 0 chrX 132695276 132695306 -33954990 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1597 1432 75 40 0 chrX 132695362 132695535 -33954761 + B2_Mm2 SINE B2 2 181 -14 3 1597 243 0 0 0 chrX 132695667 132695694 -33954602 + (CAAAA)n Simple_repeat Simple_repeat 1 27 0 3 1597 308 222 53 44 chrX 132696051 132696164 -33954132 - L1MC4 LINE L1 -212 7830 7717 3 1597 571 327 36 11 chrX 132696229 132696507 -33953789 + L1M5 LINE L1 5532 5816 -348 3 1597 1211 120 16 0 chrX 132696529 132696713 -33953583 + B2_Mm2 SINE B2 2 188 -7 3 1597 1223 100 0 6 chrX 132696701 132696882 -33953414 - B2_Mm2 SINE B2 -7 188 9 3 1597 21 57 0 0 chrX 132696917 132696952 -33953344 + AT_rich Low_complexity Low_complexity 1 35 0 3 1597 529 61 24 0 chrX 132696965 132697047 -33953249 + (TAGA)n Simple_repeat Simple_repeat 4 87 0 4 1597 230 336 55 46 chrX 132697047 132697156 -33953140 - B1_Mur1 SINE Alu -19 130 21 4 1597 365 274 31 10 chrX 132697235 132697331 -33952965 - PB1D10 SINE Alu -1 116 19 4 1597 24 0 0 0 chrX 132697347 132697371 -33952925 + AT_rich Low_complexity Low_complexity 1 24 0 4 1597 775 281 9 28 chrX 132697544 132697760 -33952536 + B3 SINE B2 3 214 -2 4 1597 699 171 0 9 chrX 132697768 132697880 -33952416 + B1_Mur3 SINE Alu 1 111 -38 4 1597 273 125 0 0 chrX 132697883 132697939 -33952357 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1597 263 344 0 0 chrX 132697941 132698031 -33952265 - L1MA4 LINE L1 -361 5939 5850 4 1597 309 204 16 16 chrX 132698937 132699007 -33951289 - ID4 SINE ID 0 83 6 4 1597 301 232 0 0 chrX 132699111 132699167 -33951129 - B1_Mur3 SINE Alu -33 116 61 4 1597 445 288 7 22 chrX 132699896 132700031 -33950265 - RSINE1 SINE B4 -31 134 2 4 1597 389 258 59 108 chrX 132700101 132700305 -33949991 + B3A SINE B2 1 194 -4 4 1597 550 191 70 42 chrX 132700317 132700459 -33949837 + B1_Mm SINE Alu 1 146 -1 4 1597 206 105 26 0 chrX 132700459 132700497 -33949799 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 4 1597 712 264 25 35 chrX 132700627 132700827 -33949469 - B3A SINE B2 0 198 1 4 1597 567 29 0 0 chrX 132701862 132701931 -33948365 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 1597 988 219 38 0 chrX 132701932 132702115 -33948181 - B3 SINE B2 -26 190 1 4 1597 1010 157 26 36 chrX 132702129 132702321 -33947975 - B2_Mm2 SINE B2 -5 190 1 4 1597 187 387 32 51 chrX 132702375 132702533 -33947763 - MER5B DNA MER1_type 0 178 24 4 1597 422 99 25 0 chrX 132702587 132702668 -33947628 + (TCTG)n Simple_repeat Simple_repeat 2 84 0 4 1597 492 220 126 8 chrX 132702727 132702846 -33947450 + RSINE1 SINE B4 27 159 -6 4 1597 25 51 0 0 chrX 132702846 132702885 -33947411 + AT_rich Low_complexity Low_complexity 1 39 0 4 1597 588 284 116 25 chrX 132703514 132703713 -33946583 + ID_B1 SINE B4 1 217 -7 4 1597 1016 136 13 0 chrX 132703969 132704124 -33946172 + B2_Mm2 SINE B2 1 157 -38 4 1597 294 290 31 31 chrX 132704096 132704192 -33946104 - B3 SINE B2 -30 186 91 4 1597 349 251 63 73 chrX 132704195 132704312 -33945984 + PB1D7 SINE Alu 28 134 -15 4 1597 361 263 76 89 chrX 132704997 132705222 -33945074 + L1MEe LINE L1 2167 2388 -3778 4 1597 218 297 0 0 chrX 132705736 132705800 -33944496 + C-rich Low_complexity Low_complexity 2 65 0 4 1597 225 0 0 0 chrX 132707779 132707804 -33942492 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 4 1597 275 276 26 13 chrX 132707860 132707937 -33942359 + Lx7 LINE L1 5618 5695 -2001 4 1597 388 130 13 25 chrX 132708404 132708483 -33941813 + CT-rich Low_complexity Low_complexity 2 79 0 4 1597 28 71 0 0 chrX 132708620 132708676 -33941620 + AT_rich Low_complexity Low_complexity 1 56 0 4 1597 1181 56 28 0 chrX 132709212 132709354 -33940942 - B1_Mm SINE Alu 0 147 2 4 1597 203 190 17 0 chrX 132709434 132709492 -33940804 + CT-rich Low_complexity Low_complexity 4 62 0 4 1597 853 164 0 43 chrX 132709503 132709643 -33940653 - B1_Mur4 SINE Alu -16 134 1 4 1597 297 336 58 13 chrX 132710059 132710213 -33940083 - L1MD LINE L1 -2150 5845 5685 4 1597 615 48 71 0 chrX 132710533 132710617 -33939679 - B1_Mus2 SINE Alu -12 135 46 4 1597 329 209 0 125 chrX 132710617 132710637 -33939659 - ID_B1 SINE B4 -12 212 122 4 1597 313 294 0 0 chrX 132710982 132711050 -33939246 + ID4_ SINE ID 2 69 -14 4 1597 754 267 10 25 chrX 132711378 132711574 -33938722 + B3A SINE B2 1 193 -5 4 1597 423 0 0 0 chrX 132711681 132711728 -33938568 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1597 1148 198 15 42 chrX 132711937 132712196 -33938100 - L1MA6 LINE L1 -33 6267 6016 4 1597 4522 136 201 27 chrX 132712196 132713107 -33937189 - RLTR25A LTR ERVK 0 1103 42 4 1597 296 23 70 0 chrX 132713107 132713150 -33937146 + (CATAT)n Simple_repeat Simple_repeat 1 46 0 4 1597 4522 136 201 27 chrX 132713150 132713177 -33937119 - RLTR25A LTR ERVK -1062 41 3 4 1597 1410 96 16 5 chrX 132713296 132713484 -33936812 + B2_Mm2 SINE B2 1 190 -5 4 1597 22 35 0 0 chrX 132714593 132714622 -33935674 + AT_rich Low_complexity Low_complexity 1 29 0 4 1597 329 184 0 116 chrX 132714630 132714716 -33935580 - IAP-d-int LTR ERVK -554 2684 2609 4 1597 351 215 0 0 chrX 132714808 132715058 -33935238 + (CTCA)n Simple_repeat Simple_repeat 1 250 0 4 1597 353 205 0 12 chrX 132715087 132715260 -33935036 + (CTCA)n Simple_repeat Simple_repeat 1 171 0 4 1597 345 296 38 43 chrX 132716420 132716604 -33933692 - IAP-d-int LTR ERVK -4611 1931 1749 4 1597 516 180 22 0 chrX 132717378 132717467 -33932829 - RLTR25A LTR ERVK -1007 96 6 4 1597 255 93 0 0 chrX 132718189 132718232 -33932064 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 4 1597 25 0 0 0 chrX 132718360 132718385 -33931911 + AT_rich Low_complexity Low_complexity 1 25 0 4 1597 298 347 48 16 chrX 132718393 132718407 -33931889 - RSINE1 SINE B4 -33 132 3 4 1597 759 153 0 9 chrX 132718407 132718519 -33931777 - B3 SINE B2 -104 112 2 4 1597 442 239 0 114 chrX 132718572 132718695 -33931601 + MT2B LTR ERVL 156 264 -337 4 1597 971 99 0 0 chrX 132718592 132718723 -33931573 + B1_Mm SINE Alu 10 140 -7 4 1597 303 266 97 42 chrX 132718828 132718993 -33931303 - L1MD3 LINE L1 -111 7884 7711 4 1597 1295 122 39 0 chrX 132719071 132719251 -33931045 - B2_Mm2 SINE B2 -8 187 1 4 1597 245 298 73 53 chrX 132719361 132719510 -33930786 - L1MD3 LINE L1 -689 7306 7154 4 1597 891 207 0 7 chrX 132719510 132719656 -33930640 - B1_Mur2 SINE Alu 0 149 5 4 1597 245 298 73 53 chrX 132719656 132719712 -33930584 - L1MD3 LINE L1 -842 7153 7097 4 1597 735 248 0 7 chrX 132719714 132719856 -33930440 + B1_Mur1 SINE Alu 2 142 -7 4 1597 248 289 112 20 chrX 132720101 132720253 -33930043 - Lx8 LINE L1 -238 7235 7070 4 1597 681 152 76 46 chrX 132720305 132720436 -33929860 - B1_Mur2 SINE Alu -5 144 10 4 1597 1759 286 111 26 chrX 132720450 132721100 -33929196 - Lx8 LINE L1 -398 7075 6371 4 1597 325 316 26 45 chrX 132721087 132721243 -33929053 - L1M2 LINE L1 -1213 4930 4778 4 1597 859 124 31 0 chrX 132721262 132721391 -33928905 - B1_Mur4 SINE Alu -6 144 12 4 1597 387 203 88 95 chrX 132721291 132721438 -33928858 - MT2B LTR ERVL -337 264 119 4 1597 531 250 6 57 chrX 132721391 132721419 -33928877 - ID_B1 SINE B4 -6 218 70 4 1597 810 282 73 69 chrX 132721440 132721782 -33928514 - L1M4c LINE L1 -1150 5590 5251 4 1597 216 0 0 0 chrX 132721782 132721806 -33928490 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1597 1186 73 0 0 chrX 132721806 132721943 -33928353 - B1_Mus1 SINE Alu -10 138 2 4 1597 810 262 101 58 chrX 132721943 132722085 -33928211 - L1M4c LINE L1 -1716 5290 5141 4 1597 1155 262 81 76 chrX 132722127 132722705 -33927591 + L1MA5 LINE L1 5358 5938 -362 4 1597 195 42 0 0 chrX 132722953 132722977 -33927319 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4 1597 481 263 368 16 chrX 132723014 132723385 -33926911 - L1M4c LINE L1 -4694 2314 1813 4 1597 1989 268 55 50 chrX 132723389 132723941 -33926355 - Lx5 LINE L1 -5 7045 6485 4 1597 3330 38 2 8 chrX 132723941 132724339 -33925957 - MTA_Mm LTR MaLR 0 396 1 4 1597 1989 268 55 50 chrX 132724339 132724400 -33925896 - Lx5 LINE L1 -566 6484 6429 4 1597 403 194 10 10 chrX 132724404 132724503 -33925793 + CT-rich Low_complexity Low_complexity 4 102 0 4 1597 1314 242 38 14 chrX 132724514 132724865 -33925431 - Lx5 LINE L1 -742 6718 6146 4 1597 1868 104 50 0 chrX 132724859 132725138 -33925158 + L1_Mur2 LINE L1 4292 4584 -1293 4 1597 438 262 65 44 chrX 132725132 132725380 -33924916 - L1M4c LINE L1 -5549 1785 1533 4 1597 338 287 129 0 chrX 132725396 132725497 -33924799 + PB1D9 SINE Alu 2 115 -5 4 1597 344 158 13 0 chrX 132725504 132725580 -33924716 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 1597 294 98 0 0 chrX 132725579 132725630 -33924666 + (GA)n Simple_repeat Simple_repeat 2 52 0 4 1597 297 253 141 20 chrX 132725634 132725783 -33924513 - L1M4c LINE L1 -5824 1510 1344 4 1597 446 271 43 58 chrX 132725958 132726146 -33924150 - L1M4c LINE L1 -6247 1087 903 4 1597 749 193 10 130 chrX 132726291 132726499 -33923797 + B3 SINE B2 1 183 -33 4 1597 3448 212 46 9 chrX 132726537 132726611 -33923685 - Lx6 LINE L1 -10 7450 7353 4 1597 189 0 0 0 chrX 132726611 132726632 -33923664 + (TCCCC)n Simple_repeat Simple_repeat 3 23 0 4 1597 3448 212 46 9 chrX 132726632 132727234 -33923062 - Lx6 LINE L1 -108 7352 6750 4 1597 881 265 46 39 chrX 132727229 132727512 -33922784 - Lx6 LINE L1 -1301 6159 5875 4 1597 323 373 181 19 chrX 132727512 132727989 -33922307 - L1M4c LINE L1 -6609 725 172 4 1597 667 236 0 0 chrX 132728012 132728156 -33922140 - B1_Mur3 SINE Alu -1 148 5 4 1597 6694 209 121 13 chrX 132728201 132729956 -33920340 - Lx9 LINE L1 -7 7637 5693 4 1597 250 154 0 0 chrX 132730212 132730251 -33920045 - Lx3A LINE L1 -193 6788 6750 4 1597 550 96 0 0 chrX 132730270 132730343 -33919953 - tRNA-Lys-AAG tRNA tRNA -3 73 1 4 1597 297 0 0 0 chrX 132731005 132731038 -33919258 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1597 302 86 35 0 chrX 132731043 132731101 -33919195 + (CAGA)n Simple_repeat Simple_repeat 2 61 0 4 1597 216 0 0 0 chrX 132731137 132731161 -33919135 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 1597 756 242 85 10 chrX 132731186 132731386 -33918910 - B3 SINE B2 -1 215 1 4 1597 234 0 0 0 chrX 132731393 132731419 -33918877 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 4 1597 807 188 27 14 chrX 132731419 132731558 -33918738 - B1_Mur4 SINE Alu -6 144 4 4 1597 683 232 56 7 chrX 132731590 132731733 -33918563 - B3A SINE B2 -47 151 2 4 1597 612 286 80 72 chrX 132731733 132731959 -33918337 - B4A SINE B4 -59 233 6 4 1597 710 257 32 37 chrX 132731999 132732189 -33918107 - B3 SINE B2 -5 211 23 4 1597 340 264 19 9 chrX 132732337 132732444 -33917852 + L1MB7 LINE L1 5215 5322 -824 4 1597 328 229 0 0 chrX 132732455 132732516 -33917780 + PB1D9 SINE Alu 1 61 -59 4 1597 696 317 72 13 chrX 132732517 132732824 -33917472 + L1MB7 LINE L1 5343 5667 -517 4 1597 920 276 62 14 chrX 132732864 132733186 -33917110 + L1MB7 LINE L1 5835 6175 -9 4 1597 350 250 183 23 chrX 132733367 132733498 -33916798 + RSINE1 SINE B4 3 154 -11 4 1597 462 296 0 0 chrX 132733791 132733916 -33916380 + ID_B1 SINE B4 90 214 -10 4 1597 654 303 9 35 chrX 132734107 132734336 -33915960 + ID_B1 SINE B4 2 224 0 4 1597 464 263 7 43 chrX 132734943 132735082 -33915214 - B1_Mus2 SINE Alu -12 135 2 4 1597 1125 89 43 43 chrX 132735129 132735316 -33914980 + B2_Mm2 SINE B2 3 189 -6 5 1597 318 267 71 46 chrX 132735351 132735547 -33914749 - L1ME4a LINE L1 -75 6049 5849 5 1597 200 354 0 0 chrX 132736228 132736310 -33913986 + CT-rich Low_complexity Low_complexity 2 83 0 5 1597 248 224 0 15 chrX 132737667 132737735 -33912561 + A-rich Low_complexity Low_complexity 5 71 0 5 1597 211 260 0 0 chrX 132737816 132737866 -33912430 + C-rich Low_complexity Low_complexity 2 51 0 5 1597 4044 116 57 2 chrX 132740010 132740607 -33909689 - Lx4A LINE L1 0 7058 6429 5 1597 1247 217 90 16 chrX 132740633 132740821 -33909475 + Lx9 LINE L1 5501 5685 -162 5 1597 423 0 0 0 chrX 132740821 132740868 -33909428 + (CAAAC)n Simple_repeat Simple_repeat 3 49 0 5 1597 1247 221 101 16 chrX 132740868 132741043 -33909253 + Lx9 LINE L1 5686 5929 -1715 5 1597 884 271 117 25 chrX 132741097 132741239 -33909057 + Lx9 LINE L1 7197 7337 -307 5 1597 1398 163 266 10 chrX 132741239 132741543 -33908753 + ORR1C2 LTR MaLR 1 382 -2 5 1597 884 271 117 25 chrX 132741543 132741793 -33908503 + Lx9 LINE L1 7338 7625 -19 5 1597 408 314 32 95 chrX 132741929 132742098 -33908198 - L1MEc LINE L1 -3225 3094 2930 5 1597 1632 42 0 0 chrX 132742098 132742288 -33908008 - B2_Mm1t SINE B2 -2 191 2 5 1597 408 314 32 95 chrX 132742288 132742466 -33907830 - L1MEc LINE L1 -3390 2929 2769 5 1597 241 32 0 0 chrX 132742648 132742679 -33907617 + B2_Mm2 SINE B2 47 77 -118 5 1597 194 0 39 0 chrX 132742791 132742817 -33907479 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1597 1208 38 0 12 chrX 132742831 132742991 -33907305 - B2_Mm2 SINE B2 -29 166 9 5 1597 259 272 168 23 chrX 132743043 132743216 -33907080 - L1MEc LINE L1 -4242 2158 1961 5 1597 23 33 0 0 chrX 132743552 132743582 -33906714 + AT_rich Low_complexity Low_complexity 1 30 0 5 1597 25 0 0 0 chrX 132743779 132743804 -33906492 + AT_rich Low_complexity Low_complexity 1 25 0 5 1597 2660 113 39 11 chrX 132743804 132744244 -33906052 - Lx2A LINE L1 -2 7006 6555 5 1597 477 286 0 0 chrX 132744277 132744389 -33905907 + PB1D7 SINE Alu 1 112 -8 5 1597 5855 107 27 18 chrX 132744603 132745479 -33904817 - Lx3A LINE L1 0 6981 6098 5 1597 316 280 86 31 chrX 132745869 132746031 -33904265 - MER58B DNA MER1_type -48 293 123 5 1597 2720 117 27 18 chrX 132746166 132746567 -33903729 - Lx4A LINE L1 -2 7056 6652 5 1597 1707 192 76 21 chrX 132747395 132747812 -33902484 + Lx3C LINE L1 6551 6996 -1 5 1597 438 228 159 31 chrX 132747821 132747970 -33902326 - B3 SINE B2 -9 207 35 5 1597 2336 124 55 3 chrX 132747970 132748350 -33901946 - Lx4A LINE L1 -2 6652 6253 5 1597 438 228 159 31 chrX 132748350 132748363 -33901933 - B3 SINE B2 -182 34 24 5 1597 21 0 0 0 chrX 132749721 132749742 -33900554 + GC_rich Low_complexity Low_complexity 1 21 0 5 1597 254 220 34 0 chrX 132750411 132750470 -33899826 + CT-rich Low_complexity Low_complexity 1 61 0 5 1597 899 116 22 0 chrX 132750470 132750608 -33899688 - B1_Mur4 SINE Alu -9 141 1 5 1597 307 291 37 37 chrX 132750813 132750920 -33899376 + PB1D10 SINE Alu 6 112 -5 5 1597 905 183 0 0 chrX 132751496 132751638 -33898658 - B1_Mus1 SINE Alu -6 142 1 5 1597 338 284 12 0 chrX 132751725 132751806 -33898490 - ID4_ SINE ID 0 83 2 5 1597 342 280 60 7 chrX 132751945 132752096 -33898200 - L1ME2 LINE L1 -208 5956 5798 5 1597 447 265 0 68 chrX 132752460 132752606 -33897690 - RSINE1 SINE B4 -28 137 2 5 1597 1181 56 0 0 chrX 132752634 132752776 -33897520 + B1_Mus2 SINE Alu 4 145 -2 5 1597 701 295 4 102 chrX 132752964 132753131 -33897165 + ID_B1 SINE B4 1 150 -74 5 1597 1263 47 0 0 chrX 132753131 132753279 -33897017 + B1_Mus1 SINE Alu 1 148 0 5 1597 701 295 4 102 chrX 132753279 132753356 -33896940 + ID_B1 SINE B4 151 221 -3 5 1597 903 245 37 47 chrX 132753734 132753948 -33896348 - ID_B1 SINE B4 -8 216 5 5 1597 2104 108 33 60 chrX 132753993 132754329 -33895967 - ORR1A2 LTR MaLR 0 327 1 5 1597 611 264 0 0 chrX 132754445 132754574 -33895722 + ID_B1 SINE B4 91 219 -5 5 1597 212 185 19 0 chrX 132755585 132755639 -33894657 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 1597 1181 57 0 0 chrX 132755935 132756075 -33894221 + B1_Mus1 SINE Alu 3 142 -6 5 1597 351 284 92 63 chrX 132756135 132756342 -33893954 - L1ME2 LINE L1 -70 6094 5882 5 1597 897 312 71 38 chrX 132756407 132756703 -33893593 + MTEa LTR MaLR 1 319 -60 5 1597 830 204 0 0 chrX 132756703 132756840 -33893456 + B1_Mur3 SINE Alu 1 137 -12 5 1597 605 69 0 11 chrX 132756845 132756933 -33893363 + (GAAA)n Simple_repeat Simple_repeat 2 88 0 5 1597 897 312 71 38 chrX 132756933 132756997 -33893299 + MTEa LTR MaLR 320 379 0 5 1597 302 305 90 90 chrX 132757048 132757271 -33893025 - MLT1E1A LTR MaLR -51 629 407 5 1597 554 297 19 19 chrX 132758799 132758960 -33891336 - RSINE1 SINE B4 -2 163 3 5 1597 1469 73 16 0 chrX 132760978 132761170 -33889126 - B2_Mm2 SINE B2 0 195 1 5 1597 463 275 122 21 chrX 132761257 132761408 -33888888 - L1M4 LINE L1 -510 5674 5499 5 1597 568 296 107 15 chrX 132761408 132761669 -33888627 - B4A SINE B4 -6 286 2 5 1597 463 275 122 21 chrX 132761669 132761755 -33888541 - L1M4 LINE L1 -686 5498 5413 5 1597 603 126 0 0 chrX 132762167 132762262 -33888034 + (TA)n Simple_repeat Simple_repeat 2 96 0 5 1597 477 0 0 0 chrX 132762368 132762421 -33887875 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1597 2043 278 92 26 chrX 132763953 132764641 -33885655 + MTE2b-int LTR MaLR 848 1580 0 5 1597 314 258 53 11 chrX 132764641 132764735 -33885561 + MTE2b LTR MaLR 1 98 -281 5 1597 953 235 78 95 chrX 132764735 132764986 -33885310 + MTE2b LTR MaLR 58 323 -56 5 1597 897 81 0 0 chrX 132764986 132765109 -33885187 + (TTCC)n Simple_repeat Simple_repeat 4 126 0 5 1597 953 235 78 95 chrX 132765109 132765163 -33885133 + MTE2b LTR MaLR 324 358 -21 5 1597 1248 128 112 15 chrX 132765226 132765432 -33884864 + URR1A DNA MER1_type 1 226 0 5 1597 347 187 54 36 chrX 132765463 132765574 -33884722 - Lx7 LINE L1 -1876 5820 5708 5 1597 890 329 61 18 chrX 132765583 132765876 -33884420 - L1M4c LINE L1 -4494 2514 2208 5 1597 6768 135 7 18 chrX 132765876 132767022 -33883274 - Lx2 LINE L1 0 6997 5864 5 1597 890 322 40 10 chrX 132767022 132767250 -33883046 - L1M4c LINE L1 -4801 2207 1971 5 1597 351 359 19 31 chrX 132767417 132767578 -33882718 + RSINE1 SINE B4 3 161 -4 5 1597 386 245 111 7 chrX 132767641 132767779 -33882517 - L1M4c LINE L1 -5426 1478 1337 5 1597 3727 130 75 11 chrX 132767899 132768473 -33881823 - RMER19C LTR ERVK 0 611 1 5 1597 25 0 0 0 chrX 132768526 132768551 -33881745 + AT_rich Low_complexity Low_complexity 1 25 0 5 1597 374 308 58 17 chrX 132768814 132768986 -33881310 + RLTR41 LTR ERV1 268 446 0 5 1597 226 221 56 34 chrX 132769028 132769117 -33881179 - L1M4 LINE L1 -3111 3035 2945 5 1597 383 273 101 43 chrX 132769204 132769342 -33880954 - B1F2 SINE Alu -1 148 3 5 1597 243 345 26 39 chrX 132769385 132769539 -33880757 + MTD LTR MaLR 18 169 -250 5 1597 804 307 27 49 chrX 132769439 132769806 -33880490 + MT2A LTR ERVL 40 398 -135 5 1597 255 255 9 146 chrX 132769854 132769964 -33880332 + RSINE1 SINE B4 3 97 -68 5 1597 785 181 0 14 chrX 132770142 132770288 -33880008 - B1_Mur1 SINE Alu 0 149 6 5 1597 7536 100 25 12 chrX 132770645 132771763 -33878533 - Lx3A LINE L1 -3 6978 5847 5 1597 1435 56 0 0 chrX 132771763 132771941 -33878355 + Lx3_Mus LINE L1 5694 5871 -1138 5 1597 24 0 0 0 chrX 132771953 132771977 -33878319 + AT_rich Low_complexity Low_complexity 1 24 0 5 1597 1280 27 0 0 chrX 132773043 132773189 -33877107 - B1_Mm SINE Alu 0 147 2 5 1597 605 290 185 25 chrX 132773424 132773700 -33876596 + MTEa LTR MaLR 60 379 0 5 1597 1448 311 88 47 chrX 132773700 132774337 -33875959 + MTEa-int LTR MaLR 1 663 -917 5 1597 834 345 30 14 chrX 132774349 132774713 -33875583 + MTEa-int LTR MaLR 816 1185 -395 5 1597 21 0 0 0 chrX 132774816 132774837 -33875459 + AT_rich Low_complexity Low_complexity 1 21 0 5 1597 809 158 23 0 chrX 132774865 132774998 -33875298 + B1_Mur4 SINE Alu 2 137 -13 5 1597 959 45 15 0 chrX 132774998 132775130 -33875166 + B1_Mus1 SINE Alu 15 148 0 5 1597 215 114 0 22 chrX 132775132 132775177 -33875119 + (CAAAAA)n Simple_repeat Simple_repeat 3 46 0 5 1597 1236 278 53 18 chrX 132775344 132775728 -33874568 - MTC-int LTR MaLR -269 1311 677 5 199 439 246 78 63 chrX 132775872 132776063 -33874233 - B3A SINE B2 -3 195 2 5 1598 313 333 25 0 chrX 132776216 132776336 -33873960 - MLT1A0 LTR MaLR -213 152 30 5 1598 1096 282 55 12 chrX 132777126 132777287 -33873009 + MTEa LTR MaLR 37 197 -182 5 1598 690 13 0 0 chrX 132777287 132777366 -33872930 + (TC)n Simple_repeat Simple_repeat 2 80 0 5 1598 1096 282 55 12 chrX 132777366 132777531 -33872765 + MTEa LTR MaLR 198 377 -2 5 1598 308 242 81 66 chrX 132777899 132778026 -33872270 - ORR1E LTR MaLR -212 147 18 5 1598 355 284 0 10 chrX 132780620 132780716 -33869580 + G-rich Low_complexity Low_complexity 6 100 0 5 1598 342 115 0 0 chrX 132780786 132780838 -33869458 + (TCC)n Simple_repeat Simple_repeat 2 53 0 5 1598 392 299 43 39 chrX 132781194 132781427 -33868869 - L1MEe LINE L1 -3759 2407 2174 5 1598 269 330 8 25 chrX 132783019 132783140 -33867156 + MER113 DNA MER1_type 372 490 -31 5 1598 626 292 267 36 chrX 132783189 132783611 -33866685 - LTR40c LTR ERVL 0 519 1 5 1598 524 291 60 0 chrX 132783689 132783823 -33866473 + ID_B1 SINE B4 80 221 -3 5 1598 578 246 36 26 chrX 132784319 132784511 -33865785 - RLTR42-int LTR ERVK -4129 1393 1200 5 1598 351 0 0 0 chrX 132784785 132784824 -33865472 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1598 753 113 0 158 chrX 132784905 132785063 -33865233 - B1_Mur1 SINE Alu -15 134 2 5 1598 440 305 93 43 chrX 132785652 132785909 -33864387 - RMER5 LTR ERV1 -232 302 33 5 1598 824 159 141 11 chrX 132786165 132786349 -33863947 - B3 SINE B2 -7 209 2 5 1598 30 0 0 0 chrX 132787218 132787248 -33863048 + AT_rich Low_complexity Low_complexity 1 30 0 5 1598 248 325 50 0 chrX 132787371 132787451 -33862845 + MER67B LTR ERV1 337 420 -241 5 1598 184 30 61 0 chrX 132787464 132787497 -33862799 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 5 1598 1209 52 0 0 chrX 132787830 132787985 -33862311 + B2_Mm2 SINE B2 1 155 -40 5 1598 1028 209 73 32 chrX 132787982 132788229 -33862067 + MTD LTR MaLR 163 419 0 5 1598 289 325 68 15 chrX 132788237 132788443 -33861853 - L1MB8 LINE L1 -17 6161 5945 5 1598 472 214 0 10 chrX 132788603 132788707 -33861589 + L1MC LINE L1 5496 5598 -735 5 1598 362 222 14 0 chrX 132788797 132788869 -33861427 - B4 SINE B4 -216 76 4 5 1598 180 156 62 62 chrX 132788932 132788980 -33861316 + L2 LINE L2 2707 2754 -665 6 1598 333 269 43 77 chrX 132789066 132789183 -33861113 - PB1D10 SINE Alu -1 116 4 6 1598 1673 74 14 3 chrX 132789334 132789579 -33860717 - L1_Mus1 LINE L1 -402 6165 5949 6 1598 2045 51 0 4 chrX 132789579 132789834 -33860462 + L1_Mus1 LINE L1 6314 6567 0 6 1598 675 275 168 62 chrX 132790060 132790448 -33859848 - RMER5 LTR ERV1 -36 498 70 6 1598 339 25 0 0 chrX 132790565 132790605 -33859691 + (TAAAA)n Simple_repeat Simple_repeat 4 43 0 6 1598 326 380 14 14 chrX 132790610 132790749 -33859547 - L1M4b LINE L1 -6863 471 333 6 1598 1049 103 115 0 chrX 132790879 132791044 -33859252 - B2_Mm1t SINE B2 -9 184 1 6 1598 890 170 7 13 chrX 132791111 132791260 -33859036 - B1_Mur3 SINE Alu 0 149 2 6 1598 485 284 15 107 chrX 132791655 132791852 -33858444 + B3A SINE B2 1 179 -19 6 1598 471 35 0 0 chrX 132791853 132791910 -33858386 + (CA)n Simple_repeat Simple_repeat 1 57 0 6 1598 452 304 119 12 chrX 132792022 132792241 -33858055 + MIR SINE MIR 8 240 -28 6 1598 296 274 0 106 chrX 132792451 132792545 -33857751 - B4 SINE B4 -207 85 2 6 1598 530 311 94 35 chrX 132793094 132793297 -33856999 + MLT1G LTR MaLR 1 215 -376 6 1598 329 333 113 0 chrX 132793385 132793553 -33856743 + MLT1G LTR MaLR 401 587 -4 6 1598 1332 235 56 48 chrX 132793590 132793948 -33856348 - ORR1D1 LTR MaLR -4 370 10 6 1598 225 0 0 0 chrX 132793954 132793979 -33856317 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1598 351 0 0 0 chrX 132793979 132794018 -33856278 + (CCA)n Simple_repeat Simple_repeat 3 41 0 6 1598 1606 47 0 0 chrX 132794074 132794264 -33856032 + B2_Mm1t SINE B2 1 190 -3 6 1598 520 246 18 0 chrX 132794275 132794389 -33855907 + PB1D10 SINE Alu 1 116 -1 6 1598 782 230 0 0 chrX 132794474 132794622 -33855674 - B1_Mur4 SINE Alu -1 149 2 6 1598 25 31 0 0 chrX 132794905 132794937 -33855359 + AT_rich Low_complexity Low_complexity 1 32 0 6 1598 271 349 0 0 chrX 132795004 132795087 -33855209 - B3A SINE B2 -113 85 3 6 1598 605 305 0 0 chrX 132795146 132795287 -33855009 - RSINE1 SINE B4 -2 163 23 6 1598 1085 62 0 7 chrX 132796061 132796208 -33854088 + (TTC)n Simple_repeat Simple_repeat 3 148 0 6 1598 861 239 21 37 chrX 132797742 132797859 -33852437 + B3 SINE B2 1 118 -98 6 1598 2794 148 75 51 chrX 132797859 132798407 -33851889 + RLTR31_Mm LTR ERVK 1 561 0 6 1598 861 239 21 37 chrX 132798407 132798476 -33851820 + B3 SINE B2 119 184 -32 6 1598 1011 106 0 47 chrX 132798694 132798842 -33851454 + B1_Mus1 SINE Alu 2 142 -6 6 1598 21 36 0 0 chrX 132799006 132799034 -33851262 + AT_rich Low_complexity Low_complexity 1 28 0 6 1598 413 352 8 0 chrX 132799043 132799168 -33851128 + RSINE1 SINE B4 4 129 -36 6 1598 2819 66 48 0 chrX 132800123 132800500 -33849796 - MTB LTR MaLR 0 400 6 6 1598 569 270 30 53 chrX 132801020 132801153 -33849143 - B1F2 SINE Alu -1 148 19 6 1598 25 0 0 0 chrX 132801153 132801178 -33849118 + AT_rich Low_complexity Low_complexity 1 25 0 6 1598 1231 48 0 0 chrX 132801178 132801325 -33848971 - B1_Mm SINE Alu 0 147 1 6 1598 378 230 49 30 chrX 132801435 132801548 -33848748 - MLT1C LTR MaLR -3 502 368 6 1598 311 338 13 13 chrX 132802272 132802422 -33847874 + MER57C2 LTR ERV1 1 150 -284 6 1598 1438 235 101 29 chrX 132802466 132802852 -33847444 - MTD LTR MaLR 0 419 6 6 1598 511 244 75 104 chrX 132802876 132803077 -33847219 + MER57C2 LTR ERV1 236 430 -4 6 1598 316 260 20 20 chrX 132803737 132803835 -33846461 + B1F2 SINE Alu 41 138 -11 6 1598 242 303 10 20 chrX 132804087 132804188 -33846108 + PB1D10 SINE Alu 3 102 -15 6 1598 224 383 0 0 chrX 132804244 132804325 -33845971 + ID4 SINE ID 2 82 -1 6 1598 267 213 0 0 chrX 132804375 132804450 -33845846 + (TG)n Simple_repeat Simple_repeat 2 76 0 6 1598 423 219 0 0 chrX 132805143 132805239 -33845057 + G-rich Low_complexity Low_complexity 42 137 0 6 1598 204 111 0 0 chrX 132805931 132805967 -33844329 + (CAA)n Simple_repeat Simple_repeat 2 37 0 6 1598 24 0 0 0 chrX 132807690 132807714 -33842582 + AT_rich Low_complexity Low_complexity 1 24 0 6 1598 26 0 0 0 chrX 132807966 132807992 -33842304 + AT_rich Low_complexity Low_complexity 1 26 0 6 1598 327 327 38 9 chrX 132808493 132808598 -33841698 + PB1D10 SINE Alu 1 108 -9 6 1598 1036 72 0 7 chrX 132808734 132808873 -33841423 + B1_Mus1 SINE Alu 11 148 0 6 1598 225 0 0 0 chrX 132808873 132808898 -33841398 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1598 1089 238 95 124 chrX 132809983 132810362 -33839934 - MTE2b LTR MaLR -3 376 9 6 1598 207 100 0 0 chrX 132810374 132810404 -33839892 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 6 1598 276 307 65 136 chrX 132810406 132810685 -33839611 - ORR1E LTR MaLR -4 355 97 6 1598 276 277 0 0 chrX 132811812 132811877 -33838419 + ID4 SINE ID 5 69 -14 6 1598 742 171 0 0 chrX 132812043 132812160 -33838136 + 5S rRNA rRNA 1 117 -4 6 1598 327 329 29 0 chrX 132812213 132812353 -33837943 + L1M5 LINE L1 2852 2995 -3151 6 1598 412 349 74 5 chrX 132812398 132812614 -33837682 - MER76 LTR ERVL -31 660 430 6 1598 641 291 48 39 chrX 132814845 132815074 -33835222 - MLT2B4 LTR ERVL -325 231 1 6 1598 289 103 0 0 chrX 132815808 132815847 -33834449 + 5S rRNA rRNA 1 39 -82 6 1598 1003 263 11 23 chrX 132815998 132816352 -33833944 + L1_Mur3 LINE L1 2119 2468 -3412 6 1598 375 252 143 18 chrX 132816408 132816684 -33833612 + L1_Mur3 LINE L1 3256 3596 -2547 6 1598 234 0 0 0 chrX 132816725 132816751 -33833545 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 6 1598 573 119 28 0 chrX 132816761 132816870 -33833426 - L1Md_F3 LINE L1 0 6584 6473 6 1598 22938 100 14 7 chrX 132816871 132818773 -33831523 - L1Md_F LINE L1 -1072 4811 2917 6 1598 4702 65 5 8 chrX 132818773 132819390 -33830906 - L1Md_F2 LINE L1 -1 6581 5967 6 1598 22938 106 34 6 chrX 132819390 132821802 -33828494 - L1Md_F LINE L1 -2967 2916 415 6 1598 585 233 112 5 chrX 132821814 132822034 -33828262 + L1_Mur3 LINE L1 3600 3872 -2271 6 1598 22 88 0 0 chrX 132822109 132822166 -33828130 + AT_rich Low_complexity Low_complexity 1 57 0 6 1598 723 298 32 26 chrX 132822187 132822397 -33827899 - L1M4 LINE L1 -944 5202 4996 6 1598 1299 116 5 0 chrX 132822397 132822586 -33827710 - B2_Mm1t SINE B2 -3 190 1 6 1598 723 298 32 26 chrX 132822586 132822720 -33827576 - L1M4 LINE L1 -1151 4995 4857 6 1598 307 331 14 43 chrX 132822732 132822750 -33827546 + ID_B1 SINE B4 90 224 0 6 1598 475 289 25 0 chrX 132822750 132822871 -33827425 + B1F SINE Alu 26 149 0 6 1598 356 310 85 12 chrX 132822888 132823158 -33827138 + L1_Mur3 LINE L1 3838 4165 -1978 6 1598 485 259 78 89 chrX 132823419 132823672 -33826624 + L1_Mur3 LINE L1 5212 5513 -787 6 1598 1122 73 0 0 chrX 132823672 132823809 -33826487 + B1_Mus2 SINE Alu 2 138 -9 6 1598 485 259 78 92 chrX 132823809 132823945 -33826351 + L1_Mur3 LINE L1 5514 5630 -670 6 1598 681 229 26 0 chrX 132824283 132824436 -33825860 - RMER30 DNA MER1_type -45 157 1 6 1598 552 168 0 0 chrX 132824571 132824672 -33825624 + (CA)n Simple_repeat Simple_repeat 2 102 0 6 1598 26 0 0 0 chrX 132824951 132824977 -33825319 + AT_rich Low_complexity Low_complexity 1 26 0 6 1598 378 0 0 0 chrX 132825743 132825785 -33824511 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1598 585 296 47 12 chrX 132826327 132826498 -33823798 - B3A SINE B2 -13 185 9 6 1598 528 282 82 63 chrX 132826758 132826875 -33823421 - L1ME2 LINE L1 -278 5886 5773 6 1598 894 234 43 19 chrX 132826875 132827084 -33823212 - B3 SINE B2 0 216 3 6 1598 528 295 83 56 chrX 132827084 132827674 -33822622 - L1ME2 LINE L1 -407 5772 5142 6 1598 530 41 14 0 chrX 132829555 132829628 -33820668 + (TG)n Simple_repeat Simple_repeat 1 74 0 6 1598 239 374 51 17 chrX 132830091 132830268 -33820028 + MER5A DNA MER1_type 7 189 0 6 1598 346 205 22 98 chrX 132830268 132830351 -33819945 + MT2B LTR ERVL 182 257 -344 6 1598 873 75 8 0 chrX 132830270 132830390 -33819906 + B1_Mus1 SINE Alu 22 142 -6 6 1598 1495 100 0 9 chrX 132831302 132831514 -33818782 - L1Md_F2 LINE L1 -19 6563 6354 6 1598 409 307 129 44 chrX 132832330 132832671 -33817625 - L1ME3A LINE L1 -276 5897 5528 6 1598 230 225 93 82 chrX 132832674 132832771 -33817525 - L1M2 LINE L1 -734 5566 5469 6 1598 21 0 0 0 chrX 132832782 132832803 -33817493 + AT_rich Low_complexity Low_complexity 1 21 0 6 1598 594 296 0 0 chrX 132833014 132833146 -33817150 - RSINE1 SINE B4 -31 134 3 6 1598 546 172 11 49 chrX 132833263 132833446 -33816850 + CT-rich Low_complexity Low_complexity 5 180 0 6 1598 266 193 35 17 chrX 132833447 132833505 -33816791 + C-rich Low_complexity Low_complexity 3 61 0 6 1598 201 171 0 0 chrX 132833649 132833684 -33816612 + T-rich Low_complexity Low_complexity 1 35 0 6 1598 348 261 75 19 chrX 132833699 132833837 -33816459 - MLT1A0 LTR MaLR -199 209 58 6 1598 489 17 0 0 chrX 132834007 132834065 -33816231 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 6 1598 7554 51 1 4 chrX 132834099 132835166 -33815130 - L1Md_F2 LINE L1 -14 6568 5505 6 1598 10123 84 12 2 chrX 132835166 132836652 -33813644 + L1_Mm LINE L1 3732 5232 -651 6 1598 22 0 0 0 chrX 132836703 132836725 -33813571 + AT_rich Low_complexity Low_complexity 1 22 0 6 1598 2274 191 9 16 chrX 132836752 132837194 -33813102 - Lx4B LINE L1 0 7058 6620 6 1598 240 383 6 13 chrX 132837226 132837382 -33812914 - L1MC LINE L1 -2235 5647 5493 6 1598 284 299 32 49 chrX 132837686 132837809 -33812487 - RMER20B LTR ERVK -29 598 478 6 1598 255 61 0 0 chrX 132838402 132838435 -33811861 + (CAAAA)n Simple_repeat Simple_repeat 5 37 0 6 1598 975 148 0 0 chrX 132839278 132839420 -33810876 - B1_Mur4 SINE Alu -7 143 2 6 1598 402 21 0 0 chrX 132839539 132839586 -33810710 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 1598 529 162 8 114 chrX 132839586 132839712 -33810584 - PB1D9 SINE Alu -6 114 2 6 1598 633 272 24 42 chrX 132840248 132840413 -33809883 + RSINE1 SINE B4 3 164 -1 6 1598 273 362 136 15 chrX 132840678 132840877 -33809419 - MER74A LTR ERVL -130 428 206 6 1598 339 90 0 64 chrX 132840939 132841020 -33809276 - RMER16 LTR ERVK -467 66 1 6 1598 603 273 22 38 chrX 132841082 132841265 -33809031 - MLT2B2 LTR ERVL -272 243 64 7 1598 235 288 27 0 chrX 132841411 132841484 -33808812 + MER53 DNA hAT 1 75 -118 7 1598 1007 263 249 28 chrX 132841707 132841892 -33808404 + RMER15 LTR ERVL 6 219 -356 7 1598 852 39 0 0 chrX 132841892 132841996 -33808300 + (GA)n Simple_repeat Simple_repeat 2 105 0 7 1598 1007 263 249 28 chrX 132841996 132842275 -33808021 + RMER15 LTR ERVL 220 572 -3 7 1598 697 275 54 0 chrX 132843094 132843243 -33807053 - B3A SINE B2 -35 163 7 7 1598 227 143 0 39 chrX 132843244 132843295 -33807001 + CT-rich Low_complexity Low_complexity 4 52 0 7 1598 779 203 7 0 chrX 132843296 132843434 -33806862 - B1_Mur2 SINE Alu -8 141 3 7 1598 328 357 88 12 chrX 132843801 132843971 -33806325 - L1M5 LINE L1 -537 5636 5454 7 1598 789 283 23 19 chrX 132843981 132844197 -33806099 - ID_B1 SINE B4 -6 218 2 7 1598 360 191 133 11 chrX 132844197 132844287 -33806009 - PB1D10 SINE Alu -2 115 15 7 1598 399 244 0 22 chrX 132844214 132844306 -33805990 - ID_B1 SINE B4 -56 168 79 7 1598 403 257 53 0 chrX 132844549 132844662 -33805634 - MLT2B4 LTR ERVL -435 121 3 7 1598 2102 176 24 0 chrX 132844772 132845153 -33805143 - RMER21B LTR ERV1 -451 391 2 7 1598 360 380 42 35 chrX 132845399 132845688 -33804608 - L1MC4a LINE L1 -1978 5904 5614 7 1598 500 319 78 82 chrX 132845761 132846031 -33804265 + B4A SINE B4 1 269 -23 7 1598 1157 55 0 20 chrX 132846527 132846664 -33803632 + B1_Mus2 SINE Alu 2 138 -9 7 1598 350 0 44 0 chrX 132846664 132846709 -33803587 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 7 1598 301 344 108 46 chrX 132846844 132847167 -33803129 - ORR1E LTR MaLR -10 349 7 7 1598 283 224 0 0 chrX 132847371 132847429 -33802867 - RSINE1 SINE B4 -27 138 81 7 1598 296 231 30 0 chrX 132849453 132849536 -33800760 - B1F SINE Alu -223 91 3 7 1598 222 264 13 53 chrX 132849477 132849553 -33800743 - B4 SINE B4 -144 148 76 7 1598 2563 189 55 43 chrX 132849606 132850178 -33800118 + RLTR40 LTR ERVK 2 576 -241 7 1598 348 43 0 0 chrX 132850178 132850224 -33800072 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1598 456 35 0 0 chrX 132850224 132850281 -33800015 + (GA)n Simple_repeat Simple_repeat 2 59 0 7 1598 2563 189 55 43 chrX 132850281 132850310 -33799986 + RLTR40 LTR ERVK 577 610 -207 7 1598 272 282 33 56 chrX 132850327 132850417 -33799879 + RLTR40 LTR ERVK 721 808 -9 7 1598 866 225 52 128 chrX 132850463 132850871 -33799425 - MTE2a LTR MaLR -2 377 1 7 1598 1199 41 0 7 chrX 132850940 132851088 -33799208 + B1_Mus2 SINE Alu 1 147 0 7 1598 403 304 53 61 chrX 132851149 132851394 -33798902 - L1M4 LINE L1 -2487 5508 5266 7 1598 213 287 125 47 chrX 132851612 132851740 -33798556 + ID_B1 SINE B4 82 219 -5 7 1598 344 338 14 35 chrX 132851814 132851955 -33798341 - ID_B1 SINE B4 0 224 87 7 1598 488 276 133 45 chrX 132851983 132852291 -33798005 - L1M4 LINE L1 -1374 4772 4438 7 1598 1004 274 74 54 chrX 132852672 132853008 -33797288 + ORR1E LTR MaLR 1 343 -16 7 1598 532 186 19 29 chrX 132853054 132853159 -33797137 + PB1D9 SINE Alu 14 117 -3 7 1598 450 333 0 21 chrX 132853855 132853996 -33796300 - RSINE1 SINE B4 0 165 28 7 1598 683 24 12 0 chrX 132854517 132854602 -33795694 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 7 1598 601 317 0 7 chrX 132854613 132854759 -33795537 - RSINE1 SINE B4 -14 151 7 7 1598 660 263 36 0 chrX 132854989 132855126 -33795170 + B1F2 SINE Alu 1 142 -7 7 1598 272 295 0 13 chrX 132855183 132855262 -33795034 + (TA)n Simple_repeat Simple_repeat 2 79 0 7 1598 230 297 66 0 chrX 132855332 132855423 -33794873 + MIRb SINE MIR 137 233 -35 7 1598 265 366 108 47 chrX 132855542 132855754 -33794542 + B4A SINE B4 68 292 0 7 1598 510 17 0 0 chrX 132855762 132855821 -33794475 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1598 1664 129 7 0 chrX 132856730 132857002 -33793294 + L1_Mm LINE L1 4930 5203 -680 7 1598 279 71 0 0 chrX 132857504 132857546 -33792750 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1598 1285 103 16 0 chrX 132857636 132857820 -33792476 + B2_Mm2 SINE B2 2 188 -7 7 1598 738 296 131 37 chrX 132857882 132858042 -33792254 + L1MDa LINE L1 1623 1788 -4845 7 1598 279 0 0 0 chrX 132858042 132858073 -33792223 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 1598 738 296 131 37 chrX 132858073 132858425 -33791871 + L1MDa LINE L1 1789 2183 -4450 7 1598 564 209 0 0 chrX 132858451 132858623 -33791673 + (GTGTG)n Simple_repeat Simple_repeat 4 175 0 7 1598 725 267 73 67 chrX 132858715 132859082 -33791214 + RLTR20C LTR ERVK 1 447 -104 7 1598 405 0 0 0 chrX 132859082 132859127 -33791169 + (TC)n Simple_repeat Simple_repeat 2 46 0 7 1598 282 73 0 0 chrX 132859127 132859167 -33791129 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1598 405 271 99 37 chrX 132859167 132859260 -33791036 + RLTR20C LTR ERVK 448 550 -1 7 1598 12152 173 23 11 chrX 132859895 132862490 -33787806 + L1_Mur2 LINE L1 2966 5591 -286 7 1598 232 322 120 38 chrX 132862497 132862681 -33787615 - LTRIS5 LTR ERV1 -10 437 239 7 1598 349 250 0 0 chrX 132865337 132865409 -33784887 + tRNA-Ala-GCA tRNA tRNA 1 72 -3 7 1598 624 176 0 0 chrX 132866239 132866375 -33783921 + CT-rich Low_complexity Low_complexity 1 136 0 7 1598 370 321 92 48 chrX 132866720 132867014 -33783282 - L1M5 LINE L1 -803 5343 5037 7 1598 798 214 11 11 chrX 132867074 132867249 -33783047 - B2_Mm2 SINE B2 -5 190 16 7 1598 322 290 18 91 chrX 132867225 132867335 -33782961 - RSINE1 SINE B4 -63 102 1 7 1598 357 157 46 46 chrX 132867351 132867406 -33782890 - MT2B LTR ERVL 0 601 543 7 1598 361 77 46 0 chrX 132867406 132867471 -33782825 + (CATA)n Simple_repeat Simple_repeat 1 68 0 7 1598 357 157 46 46 chrX 132867471 132867502 -33782794 - MT2B LTR ERVL -59 542 515 7 1598 6145 68 7 0 chrX 132867498 132868345 -33781951 - ORR1A0-int LTR MaLR -939 853 1 7 1598 3064 17 3 0 chrX 132868345 132868690 -33781606 - ORR1A0 LTR MaLR 0 346 1 7 1598 2122 45 4 0 chrX 132868852 132869116 -33781180 - L1Md_F2 LINE L1 -3 6579 6315 7 1598 719 274 0 24 chrX 132869135 132869341 -33780955 + B3 SINE B2 2 202 -14 7 1598 1562 118 4 8 chrX 132870146 132870401 -33779895 - Lx2B LINE L1 -492 6508 6255 7 1598 6506 155 8 5 chrX 132870403 132871608 -33778688 - L1_Mur2 LINE L1 -936 4941 3733 7 1598 423 0 0 0 chrX 132871841 132871888 -33778408 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 1598 232 213 66 0 chrX 132871891 132871952 -33778344 + (CATG)n Simple_repeat Simple_repeat 1 65 0 7 1598 248 340 69 10 chrX 132872396 132872497 -33777799 + ORR1D2 LTR MaLR 77 183 -187 7 1598 396 0 0 0 chrX 132872524 132872568 -33777728 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1598 508 337 57 64 chrX 132876122 132876436 -33773860 + RLTR17 LTR ERVK 115 426 -266 7 1598 310 294 8 22 chrX 132877638 132877801 -33772495 + L1_Mur3 LINE L1 1637 1797 -2117 7 1598 207 0 0 0 chrX 132878095 132878118 -33772178 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1598 829 158 3 5 chrX 132878157 132878321 -33771975 - B2_Mm2 SINE B2 -29 164 2 7 1598 247 304 56 47 chrX 132878322 132878584 -33771712 + L1_Mur3 LINE L1 2100 2362 -3518 7 1598 1023 271 11 148 chrX 132878802 132878872 -33771424 - MTE2b LTR MaLR 0 379 318 7 1598 4189 101 28 0 chrX 132878872 132879474 -33770822 + L1Md_F2 LINE L1 5951 6569 -13 7 1598 1023 271 11 148 chrX 132879474 132879776 -33770520 - MTE2b LTR MaLR -62 317 58 7 1598 342 211 76 22 chrX 132879777 132879869 -33770427 - MTE2b LTR MaLR -282 97 1 7 1598 327 294 52 22 chrX 132879869 132880120 -33770176 + L1_Rod LINE L1 2575 2835 -3308 7 1598 860 242 5 28 chrX 132880232 132880449 -33769847 - B3 SINE B2 -2 214 3 7 1598 1327 241 68 17 chrX 132880542 132880893 -33769403 + ORR1D2 LTR MaLR 2 370 0 7 1598 4369 185 28 36 chrX 132880988 132881855 -33768441 - RMER13A LTR ERVK 0 860 1 7 1598 285 312 96 11 chrX 132882153 132882331 -33767965 + MER2 DNA MER2_type 36 228 -117 7 1598 289 246 0 14 chrX 132884133 132884203 -33766093 + tRNA-Ala-GCY_ tRNA tRNA 4 72 -3 7 1598 390 167 30 0 chrX 132884410 132884476 -33765820 - RLTR12A LTR ERVK -44 524 457 7 1598 2226 40 0 0 chrX 132884476 132884751 -33765545 + L1Md_F2 LINE L1 5945 6219 -363 7 1598 6076 80 29 0 chrX 132885472 132886340 -33763956 - L1_Mus2 LINE L1 0 6566 5674 7 1598 670 336 22 2 chrX 132886495 132886904 -33763392 - L1_Mur3 LINE L1 -1217 4663 4247 7 1598 1243 209 80 17 chrX 132887065 132887415 -33762881 - RLTR22_Mur LTR ERVK -1145 703 332 7 1598 431 257 78 7 chrX 132887423 132887564 -33762732 + Lx6 LINE L1 7100 7250 -210 7 1598 7936 113 11 20 chrX 132887613 132889543 -33760753 + L1_Mus2 LINE L1 4668 6565 -1 7 1598 2301 60 3 7 chrX 132889551 132889834 -33760462 + L1Md_F2 LINE L1 6301 6582 0 7 1598 5606 213 66 19 chrX 132889866 132891202 -33759094 + Lx3C LINE L1 5594 6999 -1 7 1598 576 111 0 0 chrX 132892140 132892212 -33758084 + tRNA-Ala-GCA tRNA tRNA 1 72 -3 7 1598 956 145 58 48 chrX 132892625 132892813 -33757483 - B2_Mm2 SINE B2 -4 191 2 7 1598 283 306 107 25 chrX 132892990 132893271 -33757025 - L1M5 LINE L1 -1350 4796 4493 7 1598 2346 42 0 0 chrX 132893379 132893642 -33756654 - L1Md_T LINE L1 -2 6580 6318 7 1598 955 236 81 104 chrX 132894070 132894514 -33755782 + RMER5 LTR ERV1 13 446 -88 7 1598 5372 120 5 2 chrX 132894540 132895350 -33754946 - L1_Mm LINE L1 -1015 4868 4057 7 1598 1197 274 28 17 chrX 132895696 132896049 -33754247 - Lx6 LINE L1 -4 7456 7100 7 1598 1250 200 29 22 chrX 132896057 132896369 -33753927 + RLTR22_Mur LTR ERVK 332 645 -1203 7 1598 835 314 29 12 chrX 132896567 132896977 -33753319 + L1_Mur3 LINE L1 4247 4663 -1217 7 1598 551 138 0 0 chrX 132897160 132897247 -33753049 + MusHAL1 LINE L1 1051 1137 -1575 7 1598 246 250 12 0 chrX 132897906 132897988 -33752308 + RLTR22_Mur LTR ERVK 655 743 -1065 7 1598 3660 128 32 7 chrX 132898011 132899031 -33751265 + L1VL4 LINE L1 138 1389 -2170 7 1598 1061 132 10 156 chrX 132899341 132899655 -33750641 + Lx3_Mus LINE L1 6742 7009 0 7 1598 407 262 103 0 chrX 132899858 132899965 -33750331 + PB1 SINE Alu 10 127 0 7 1598 183 80 0 0 chrX 132900014 132900039 -33750257 + (CAA)n Simple_repeat Simple_repeat 3 27 0 8 1598 288 259 67 11 chrX 132901006 132901096 -33749200 + Lx6 LINE L1 7061 7155 -305 8 1598 271 365 9 0 chrX 132902128 132902235 -33748061 - Lx6 LINE L1 -305 7155 7048 8 1598 543 97 0 0 chrX 132902259 132902331 -33747965 + tRNA-Ala-GCA tRNA tRNA 1 72 -3 8 1598 6383 8 0 0 chrX 132902559 132903286 -33747010 - L1Md_T LINE L1 0 6582 5917 8 1598 210 37 0 0 chrX 132903286 132903313 -33746983 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 8 1598 726 173 98 12 chrX 132903492 132903656 -33746640 - B2_Mm2 SINE B2 -9 186 9 8 1598 1207 255 92 71 chrX 132904729 132905252 -33745044 + RMER5 LTR ERV1 1 534 0 8 1598 525 32 0 0 chrX 132906519 132906582 -33743714 + (CA)n Simple_repeat Simple_repeat 2 64 0 8 1598 486 0 0 0 chrX 132906582 132906635 -33743661 + (GA)n Simple_repeat Simple_repeat 2 55 0 8 1599 2207 121 12 15 chrX 132907685 132908013 -33742283 + ORR1A2 LTR MaLR 1 327 0 8 1599 1064 209 18 0 chrX 132908507 132908732 -33741564 - Lx6 LINE L1 -689 6771 6543 8 1599 314 246 14 110 chrX 132908733 132908879 -33741417 + RLTR22_Mur LTR ERVK 1463 1594 -254 8 1599 249 169 0 0 chrX 132909539 132909598 -33740698 + (TG)n Simple_repeat Simple_repeat 2 60 0 8 1599 291 194 66 75 chrX 132909602 132909708 -33740588 + RLTR20A1 LTR ERVK 447 551 0 8 1599 7128 57 3 3 chrX 132910811 132911691 -33738605 - L1Md_F2 LINE L1 -3 6579 5700 8 1599 1168 233 100 96 chrX 132911788 132912320 -33737976 - RMER5 LTR ERV1 0 534 1 8 1599 230 286 88 0 chrX 132912841 132912932 -33737364 + L1M5 LINE L1 4493 4591 -1555 8 1599 874 163 59 48 chrX 132913292 132913479 -33736817 + B2_Mm2 SINE B2 2 190 -5 8 1599 200 31 62 0 chrX 132913673 132913705 -33736591 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 1599 542 111 0 0 chrX 132913904 132913976 -33736320 - tRNA-Ala-GCG tRNA tRNA -3 72 1 8 1599 233 383 9 0 chrX 132914000 132914107 -33736189 + Lx6 LINE L1 7048 7155 -305 8 1599 258 351 11 0 chrX 132915154 132915248 -33735048 - Lx6 LINE L1 -305 7155 7061 8 1599 586 96 0 0 chrX 132915285 132915358 -33734938 + tRNA-Ala-GCA tRNA tRNA 1 73 -2 8 1599 188 35 35 0 chrX 132915567 132915596 -33734700 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 8 1599 35157 76 12 5 chrX 132915661 132921787 -33728509 - L1Md_F2 LINE L1 -12 6570 441 8 1599 4375 101 4 0 chrX 132921801 132922602 -33727694 - L1_Mus1 LINE L1 -546 6021 5215 8 1599 6216 111 3 10 chrX 132922595 132923506 -33726790 + L1_Mus1 LINE L1 4299 5203 -680 8 1599 346 305 54 54 chrX 132923887 132923998 -33726298 + B1F2 SINE Alu 3 113 -36 8 1599 1633 206 103 28 chrX 132924067 132924226 -33726070 + MTC LTR MaLR 1 196 -225 8 1599 2109 41 16 0 chrX 132924226 132924470 -33725826 + L1Md_F3 LINE L1 6323 6570 -14 8 1599 1633 206 103 28 chrX 132924470 132924699 -33725597 + MTC LTR MaLR 197 418 -3 8 1599 516 130 0 0 chrX 132924857 132924949 -33725347 + (TG)n Simple_repeat Simple_repeat 1 92 0 8 1599 1326 104 22 11 chrX 132925039 132925224 -33725072 + B2_Mm2 SINE B2 2 188 -7 8 1599 418 327 81 87 chrX 132925277 132925746 -33724550 + L1MDa LINE L1 1623 2088 -4545 8 1599 236 154 19 0 chrX 132925819 132925871 -33724425 + (GTGTG)n Simple_repeat Simple_repeat 2 54 0 8 1599 443 222 0 7 chrX 132925895 132926049 -33724247 + (GTGTG)n Simple_repeat Simple_repeat 5 157 0 8 1599 579 272 299 42 chrX 132926135 132926507 -33723789 + RLTR20A2 LTR ERVK 1 446 -105 8 1599 363 60 0 0 chrX 132926507 132926557 -33723739 + (TG)n Simple_repeat Simple_repeat 2 51 0 8 1599 340 296 103 19 chrX 132926557 132926649 -33723647 + RLTR20A2 LTR ERVK 447 550 -1 8 1599 789 40 0 0 chrX 132927804 132927905 -33722391 + (CA)n Simple_repeat Simple_repeat 2 102 0 8 1599 1115 244 88 93 chrX 132927933 132928470 -33721826 - RMER5 LTR ERV1 0 534 1 8 1599 301 290 19 0 chrX 132928990 132929097 -33721199 + L1MDa LINE L1 4884 4992 -1545 8 1599 888 157 59 48 chrX 132929447 132929634 -33720662 + B2_Mm2 SINE B2 2 190 -5 8 1599 201 108 0 0 chrX 132929825 132929862 -33720434 + (A)n Simple_repeat Simple_repeat 1 37 0 8 1599 542 111 0 0 chrX 132930060 132930132 -33720164 - tRNA-Ala-GCG tRNA tRNA -3 72 1 8 1599 233 383 9 0 chrX 132930156 132930263 -33720033 + Lx6 LINE L1 7048 7155 -305 8 1599 586 96 0 0 chrX 132931442 132931515 -33718781 + tRNA-Ala-GCA tRNA tRNA 1 73 -2 8 1599 18881 63 1 15 chrX 132931741 132934893 -33715403 - L1Md_F2 LINE L1 -12 6570 3463 8 1599 8607 81 2 15 chrX 132934892 132936071 -33714225 + L1_Mm LINE L1 4374 5536 -347 8 1599 249 383 9 0 chrX 132936275 132936382 -33713914 - Lx6 LINE L1 -305 7155 7048 8 1599 542 111 0 0 chrX 132936406 132936478 -33713818 + tRNA-Ala-GCG tRNA tRNA 1 72 -3 8 1599 200 31 62 0 chrX 132936677 132936709 -33713587 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1599 874 163 59 48 chrX 132936903 132937090 -33713206 - B2_Mm2 SINE B2 -5 190 2 8 1599 230 286 88 0 chrX 132937450 132937541 -33712755 - L1M5 LINE L1 -1555 4591 4493 8 1599 1168 233 100 96 chrX 132938062 132938594 -33711702 + RMER5 LTR ERV1 1 534 0 8 1599 7441 57 3 3 chrX 132938691 132939571 -33710725 + L1Md_F2 LINE L1 5700 6579 -3 8 1599 291 194 66 75 chrX 132940674 132940780 -33709516 - RLTR20A1 LTR ERVK 0 551 447 8 1599 249 169 0 0 chrX 132940784 132940843 -33709453 + (CA)n Simple_repeat Simple_repeat 2 60 0 8 1599 314 246 14 110 chrX 132941503 132941649 -33708647 - RLTR22_Mur LTR ERVK -254 1594 1463 8 1599 1064 209 18 0 chrX 132941650 132941875 -33708421 + Lx6 LINE L1 6543 6771 -689 8 1599 2207 121 12 15 chrX 132942369 132942697 -33707599 - ORR1A2 LTR MaLR 0 327 1 8 1599 432 0 0 0 chrX 132943747 132943795 -33706501 + (TC)n Simple_repeat Simple_repeat 2 49 0 8 1599 417 39 0 0 chrX 132943795 132943845 -33706451 + (TG)n Simple_repeat Simple_repeat 2 52 0 8 1599 9233 171 25 19 chrX 132944572 132946386 -33703910 + L1_Mur2 LINE L1 2966 4791 -1086 8 1599 3498 89 6 4 chrX 132946389 132946875 -33703421 + RLTR1C LTR ERV1 1 487 -16 8 1599 3427 169 9 20 chrX 132946895 132947552 -33702744 + L1_Mur2 LINE L1 4804 5453 -433 8 1599 359 82 0 20 chrX 132947798 132947841 -33702455 + L1_Mm LINE L1 5544 5586 -297 8 1599 8394 54 0 7 chrX 132947841 132948831 -33701465 + L1Md_F2 LINE L1 5587 6569 -13 8 1599 251 299 23 11 chrX 132948881 132948969 -33701327 - Lx6 LINE L1 -305 7155 7067 8 1599 394 250 0 0 chrX 132949012 132949084 -33701212 + tRNA-Ala-GCA tRNA tRNA 1 72 -3 8 1599 4332 82 11 16 chrX 132949661 132950308 -33699988 - L1VL4 LINE L1 -1417 2142 1499 8 1599 5396 95 9 2 chrX 132951087 132952365 -33697931 - L1VL4 LINE L1 -2056 1503 217 8 1599 247 194 0 40 chrX 132952375 132952450 -33697846 + (TTTA)n Simple_repeat Simple_repeat 2 73 0 8 1599 1623 242 103 70 chrX 132952488 132952921 -33697375 - RMER21B LTR ERV1 -209 633 185 8 1599 2939 51 3 0 chrX 132952921 132953252 -33697044 - IAPEY3_LTR LTR ERVK 0 332 1 8 1599 1623 242 103 70 chrX 132953252 132953431 -33696865 - RMER21B LTR ERV1 -658 184 1 8 1599 27532 52 138 2 chrX 132953989 132958555 -33691741 + L1Md_A LINE L1 440 5585 -298 8 1599 8955 35 0 0 chrX 132958555 132959549 -33690747 + L1Md_T LINE L1 5587 6580 -2 8 1599 15240 217 20 68 chrX 132959549 132960380 -33689916 + L1Md_A LINE L1 4737 5581 -299 8 1599 8437 51 2 0 chrX 132960380 132961362 -33688934 + L1Md_F3 LINE L1 5587 6570 -14 8 1599 271 393 58 22 chrX 132961949 132962087 -33688209 - MIRc SINE MIR -63 205 63 8 1599 486 83 0 0 chrX 132962279 132962351 -33687945 + (CATA)n Simple_repeat Simple_repeat 3 74 0 8 1599 250 332 11 0 chrX 132963101 132963208 -33687088 + L1M4 LINE L1 4849 4956 -1190 8 1599 851 177 47 47 chrX 132963208 132963398 -33686898 + B2_Mm2 SINE B2 2 191 -4 8 1599 372 311 100 53 chrX 132963401 132963740 -33686556 + L1MD LINE L1 4982 5336 -810 8 1599 215 159 85 64 chrX 132963934 132963981 -33686315 + PB1D10 SINE Alu 18 65 -52 8 1599 218 81 0 26 chrX 132964016 132964054 -33686242 + (GAAAA)n Simple_repeat Simple_repeat 1 37 0 8 1599 583 97 0 0 chrX 132964903 132964975 -33685321 - tRNA-Ala-GCA tRNA tRNA -3 72 1 8 1599 272 333 28 19 chrX 132964999 132965106 -33685190 + Lx6 LINE L1 7048 7155 -305 8 1599 1279 264 92 46 chrX 132965767 132966204 -33684092 - RMER21B LTR ERV1 -166 676 220 8 1599 363 211 0 0 chrX 132966212 132966288 -33684008 - RMER21B LTR ERV1 -565 277 202 8 1599 512 196 9 18 chrX 132966290 132966404 -33683892 - RMER21B LTR ERV1 -539 303 191 8 1599 482 219 0 9 chrX 132966408 132966514 -33683782 - RMER21B LTR ERV1 -550 292 188 8 1599 525 247 84 26 chrX 132966501 132966655 -33683641 - RMER21B LTR ERV1 -489 353 191 8 1599 370 200 12 0 chrX 132966658 132966738 -33683558 - RMER21B LTR ERV1 -554 288 208 8 1599 542 133 37 19 chrX 132966753 132966860 -33683436 - RMER21B LTR ERV1 -546 296 188 8 1599 379 219 0 0 chrX 132966866 132966948 -33683348 - RMER21B LTR ERV1 -556 286 205 8 1599 397 255 99 94 chrX 132967549 132967574 -33682722 - RMER21B LTR ERV1 -442 400 375 8 1599 194 0 39 0 chrX 132967574 132967600 -33682696 + (TGGG)n Simple_repeat Simple_repeat 1 27 0 8 1599 397 255 99 94 chrX 132967600 132967786 -33682510 - RMER21B LTR ERV1 -468 374 188 8 1599 839 245 51 42 chrX 132967786 132968003 -33682293 + RMER21B LTR ERV1 624 842 0 8 1599 900 229 27 0 chrX 132968761 132968949 -33681347 - B3 SINE B2 0 216 24 8 1599 747 273 77 0 chrX 132968992 132969186 -33681110 + B3 SINE B2 1 209 -7 8 1599 4602 237 49 24 chrX 132970446 132970925 -33679371 - Lx6 LINE L1 -582 6878 6396 8 1599 261 0 0 0 chrX 132970925 132970954 -33679342 + (TC)n Simple_repeat Simple_repeat 2 30 0 8 1599 297 0 0 0 chrX 132970954 132970986 -33679310 + (TG)n Simple_repeat Simple_repeat 2 34 0 8 1599 4602 237 49 24 chrX 132970986 132971164 -33679132 - Lx6 LINE L1 -1065 6395 6219 8 1599 504 32 0 0 chrX 132971164 132971226 -33679070 + (TC)n Simple_repeat Simple_repeat 2 63 0 8 1599 4602 235 44 22 chrX 132971226 132971848 -33678448 - Lx6 LINE L1 -1242 6218 5563 8 1599 1182 289 84 13 chrX 132971863 132971929 -33678367 + Lx6 LINE L1 7036 7116 -344 8 1599 633 27 0 0 chrX 132971929 132972004 -33678292 + (TA)n Simple_repeat Simple_repeat 2 76 0 8 1599 1182 289 84 13 chrX 132972004 132972330 -33677966 + Lx6 LINE L1 7117 7455 -5 8 1599 203 261 14 28 chrX 132973933 132973956 -33676340 + T-rich Low_complexity Low_complexity 48 70 0 8 1599 354 80 0 0 chrX 132973956 132974006 -33676290 + (TTG)n Simple_repeat Simple_repeat 2 51 0 8 1599 3754 88 4 4 chrX 132974006 132974542 -33675754 - L1_Mus2 LINE L1 0 6566 6077 9 1599 7480 115 14 3 chrX 132974543 132975689 -33674607 + MusHAL1 LINE L1 1114 2272 -440 9 1599 393 255 30 30 chrX 132975705 132975806 -33674490 - PB1D10 SINE Alu -5 112 12 9 1599 375 288 113 70 chrX 132976013 132976315 -33673981 - L1MD LINE L1 -813 5333 5019 9 1599 685 161 42 8 chrX 132976359 132976528 -33673768 - B2_Mm2 SINE B2 -6 187 3 9 1599 338 324 125 26 chrX 132976788 132977140 -33673156 - L1M5 LINE L1 -1296 4850 4464 9 1599 293 232 23 125 chrX 132977857 132977985 -33672311 - RLTR22_Mur LTR ERVK -251 1597 1483 9 1599 1027 233 28 0 chrX 132977985 132978234 -33672062 + Lx6 LINE L1 6516 6771 -689 9 1599 1188 147 0 10 chrX 132978253 132978453 -33671843 + MusHAL1 LINE L1 866 1063 -1649 9 1599 1931 97 97 9 chrX 132978453 132978794 -33671502 - MERVK26-int LTR ERVK -1358 5561 5191 9 1599 10546 106 8 3 chrX 132978783 132980227 -33670069 - MERVK26-int LTR ERVK -3792 3127 1677 9 1599 470 263 62 60 chrX 132980229 132980467 -33669829 - RMER1A Other Other -865 165 4 9 1599 629 236 423 0 chrX 132980536 132980846 -33669450 - RMER1B Other Other -544 522 82 9 1599 456 143 0 26 chrX 132980887 132981002 -33669294 + (TG)n Simple_repeat Simple_repeat 1 112 0 9 1599 891 59 0 0 chrX 132981005 132981123 -33669173 + (CCTG)n Simple_repeat Simple_repeat 1 118 0 9 1599 575 298 14 70 chrX 132981221 132981434 -33668862 - MLT1C LTR MaLR -260 207 7 9 1599 487 244 48 24 chrX 132981506 132981632 -33668664 - B1F SINE Alu 0 149 21 9 1599 637 213 8 0 chrX 132981520 132981642 -33668654 - ID_B1 SINE B4 -11 213 91 9 1599 778 194 28 28 chrX 132981735 132981763 -33668533 - L1_Mur3 LINE L1 -4463 1414 1389 9 1599 444 19 0 0 chrX 132981763 132981816 -33668480 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 9 1599 1096 244 30 25 chrX 132981816 132982302 -33667994 - L1_Mur3 LINE L1 -4489 1388 898 9 1599 441 0 0 0 chrX 132982569 132982618 -33667678 + (CA)n Simple_repeat Simple_repeat 2 50 0 9 1599 702 0 0 0 chrX 132983591 132983669 -33666627 + (TC)n Simple_repeat Simple_repeat 1 78 0 9 1599 416 19 19 0 chrX 132983669 132983721 -33666575 + (CA)n Simple_repeat Simple_repeat 1 54 0 9 1599 39 38 0 0 chrX 132984211 132984264 -33666032 + AT_rich Low_complexity Low_complexity 1 53 0 9 1599 822 358 54 10 chrX 132984272 132984788 -33665508 + Lx8 LINE L1 6768 7306 -167 9 1599 3967 107 16 7 chrX 132985166 132985583 -33664713 - L1_Mm LINE L1 -221 5662 5240 9 1599 399 41 0 0 chrX 132985583 132985632 -33664664 + (TG)n Simple_repeat Simple_repeat 2 50 0 9 1599 3967 107 16 7 chrX 132985632 132985787 -33664509 - L1_Mm LINE L1 -644 5239 5085 9 1599 6773 94 3 11 chrX 132985785 132986724 -33663572 + L1_Mus1 LINE L1 5636 6567 0 9 1599 378 191 40 20 chrX 132987545 132987695 -33662601 + (TATATG)n Simple_repeat Simple_repeat 4 156 0 9 1599 919 229 17 86 chrX 132988280 132988581 -33661715 - RMER1C Other Other -32 1310 1031 9 1599 22 35 0 0 chrX 132988956 132988985 -33661311 + AT_rich Low_complexity Low_complexity 1 29 0 9 1599 186 43 0 0 chrX 132988994 132989017 -33661279 + (TGG)n Simple_repeat Simple_repeat 1 23 0 9 1599 698 155 6 0 chrX 132989756 132989924 -33660372 + CT-rich Low_complexity Low_complexity 1 169 0 9 1599 331 294 141 42 chrX 132991454 132991667 -33658629 - MLT1D LTR MaLR -2 503 270 9 1599 263 325 61 18 chrX 132992705 132992868 -33657428 + RMER15 LTR ERVL 389 558 -17 9 1599 279 0 0 0 chrX 132993461 132993492 -33656804 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 1599 1988 195 5 3 chrX 132993678 132994059 -33656237 + L1_Mur1 LINE L1 5020 5401 -485 9 1599 38940 40 1 3 chrX 132994059 133000000 -33650296 + L1Md_T LINE L1 289 6319 -266 9 1599 2247 41 0 0 chrX 133000000 133000266 -33650030 + L1Md_T LINE L1 6317 6582 0 1 1599 6339 192 37 6 chrX 133000281 133001794 -33648502 + Lx3C LINE L1 5387 6958 -18 2 1599 567 0 0 0 chrX 133001798 133001861 -33648435 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 3 1599 604 254 0 0 chrX 133002893 133003023 -33647273 + B1_Mus2 SINE Alu 6 135 -12 4 1599 522 213 51 3 chrX 133003699 133003823 -33646473 - B1_Mus1 SINE Alu -6 142 14 5 1599 251 366 27 59 chrX 133004302 133004488 -33645808 - B3A SINE B2 -16 182 3 6 1599 1909 249 67 18 chrX 133004937 133005445 -33644851 - Lx5 LINE L1 -3 7047 6515 7 1599 1411 224 21 35 chrX 133005454 133005792 -33644504 - L1_Mur2 LINE L1 -3483 2394 2062 8 1599 444 19 0 0 chrX 133005797 133005850 -33644446 + (TG)n Simple_repeat Simple_repeat 2 54 0 9 1599 377 250 0 0 chrX 133006110 133006202 -33644094 - Lx9 LINE L1 -149 7495 7404 1 1599 436 284 23 79 chrX 133006201 133006415 -33643881 - Lx9 LINE L1 -450 7194 6993 1 1599 734 299 11 30 chrX 133006455 133006717 -33643579 - Lx9 LINE L1 -676 6968 6712 1 1599 336 236 56 11 chrX 133006836 133006926 -33643370 - Lx7 LINE L1 -390 7306 7213 1 1599 22595 73 14 1 chrX 133006957 133010605 -33639691 - L1Md_F2 LINE L1 0 6582 2912 1 1599 1689 127 12 0 chrX 133010603 133010856 -33639440 - L1Md_F2 LINE L1 -5981 635 380 1 1599 515 286 69 93 chrX 133011192 133011396 -33638900 - Lx6 LINE L1 -4 7456 7258 1 1599 439 235 12 0 chrX 133011409 133011575 -33638721 + (CA)n Simple_repeat Simple_repeat 1 168 0 1 1599 639 269 12 18 chrX 133011661 133011824 -33638472 + URR1A DNA MER1_type 1 162 -64 1 1599 407 216 0 0 chrX 133011824 133011912 -33638384 - L1_Mm LINE L1 -611 5272 5185 1 1599 36928 46 1 18 chrX 133011911 133017083 -33633213 + L1Md_A LINE L1 511 5586 -297 1 1599 8957 35 1 0 chrX 133017083 133018078 -33632218 + L1Md_A LINE L1 5587 6582 0 1 1599 6194 186 23 29 chrX 133018078 133018947 -33631349 - L1_Mur2 LINE L1 -686 5191 4338 1 1599 1173 102 0 0 chrX 133018947 133019094 -33631202 - B1_Mus1 SINE Alu -1 147 1 1 1599 6194 186 23 29 chrX 133019094 133019516 -33630780 - L1_Mur2 LINE L1 -1540 4337 3907 1 1599 4062 183 6 7 chrX 133019516 133020200 -33630096 + Lx4A LINE L1 6374 7056 -2 2 1599 2443 302 38 16 chrX 133020204 133021130 -33629166 + Lx7 LINE L1 5780 6725 -971 2 1599 260 261 31 0 chrX 133022733 133022798 -33627498 + U6 snRNA snRNA 15 81 -26 2 1599 414 39 0 0 chrX 133023545 133023597 -33626699 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1599 2883 123 111 31 chrX 133024058 133024593 -33625703 - RLTR1D LTR ERV1 -16 589 1 2 1599 630 206 8 0 chrX 133024594 133024720 -33625576 + Lx2 LINE L1 5474 5600 -286 2 1599 3550 138 21 7 chrX 133024713 133025290 -33625006 + Lx2 LINE L1 5904 6488 -509 2 1599 360 185 34 0 chrX 133025283 133025379 -33624917 + Lx2B LINE L1 5918 6022 -1036 2 1599 3124 24 0 0 chrX 133025381 133025716 -33624580 + IAPLTR1a_Mm LTR ERVK 1 335 -2 2 1599 4931 31 7 0 chrX 133025716 133026295 -33624001 + IAPEz-int LTR ERVK 9 591 -5890 2 1599 446 66 0 32 chrX 133026327 133026390 -33623906 + IAPEz-int LTR ERVK 1359 1419 -5062 2 1599 1855 119 4 4 chrX 133026379 133026641 -33623655 + IAPEz-int LTR ERVK 2236 2497 -5183 2 1599 937 88 24 0 chrX 133026636 133026761 -33623535 + IAPEz-int LTR ERVK 4783 4910 -2770 2 1599 21597 11 2 0 chrX 133026763 133029116 -33621180 + IAPEz-int LTR ERVK 4123 6481 0 2 1599 3155 18 3 0 chrX 133029116 133029452 -33620844 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1599 3177 254 29 19 chrX 133029458 133030382 -33619914 + Lx2B LINE L1 6025 6981 -16 2 1599 2278 243 27 11 chrX 133030370 133030920 -33619376 + Lx5 LINE L1 5267 5825 -52 2 1599 607 122 0 0 chrX 133030914 133031004 -33619292 + Lx2 LINE L1 6556 6645 -352 3 1599 1250 134 10 10 chrX 133031007 133031210 -33619086 + Lx2 LINE L1 6789 6991 -6 3 1599 221 83 0 27 chrX 133031263 133031300 -33618996 + (GGGAA)n Simple_repeat Simple_repeat 1 36 0 3 1599 701 341 69 0 chrX 133031302 133031677 -33618619 + Lx5 LINE L1 5836 6236 -814 2 1599 38449 17 2 7 chrX 133031675 133037463 -33612833 + L1Md_A LINE L1 1 5586 -297 3 199 9190 16 9 1 chrX 133037463 133038451 -33611845 + L1Md_A LINE L1 5587 6582 0 3 1600 1751 320 27 5 chrX 133038451 133039038 -33611258 + Lx5 LINE L1 6224 6823 -227 2 1600 446 362 48 14 chrX 133039290 133039500 -33610796 + Lx5 LINE L1 6831 7047 -3 2 1600 229 309 75 68 chrX 133039921 133040067 -33610229 + B1F SINE Alu 1 147 -2 3 1600 2243 101 3 62 chrX 133040412 133040750 -33609546 + L1_Mus2 LINE L1 6247 6564 -2 3 1600 270 0 0 0 chrX 133040857 133040887 -33609409 + (TAAAA)n Simple_repeat Simple_repeat 5 34 0 3 1600 746 225 0 7 chrX 133041353 133041496 -33608800 + B1_Mus1 SINE Alu 2 143 -5 3 1600 312 182 62 16 chrX 133041567 133041695 -33608601 + (TAGA)n Simple_repeat Simple_repeat 3 136 0 3 1600 3351 203 72 31 chrX 133041708 133042649 -33607647 + L1_Mur3 LINE L1 2902 3881 -1999 3 1600 1038 272 61 16 chrX 133042669 133042991 -33607305 + RMER19B LTR ERVK 167 664 -238 3 1600 25 31 0 0 chrX 133043001 133043033 -33607263 + AT_rich Low_complexity Low_complexity 1 32 0 4 1600 539 274 79 75 chrX 133043036 133043435 -33606861 - RMER2 LTR ERV1 -63 504 3 4 1600 802 223 16 42 chrX 133043444 133043636 -33606660 + RMER19C LTR ERVK 423 609 -2 4 1600 1555 225 16 18 chrX 133043648 133044033 -33606263 + L1_Mur3 LINE L1 3843 4226 -1654 3 1600 296 0 0 49 chrX 133044337 133044378 -33605918 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1600 1358 248 47 17 chrX 133044429 133044851 -33605445 + L1_Mur3 LINE L1 4227 4661 -1219 3 1600 1466 258 56 2 chrX 133044864 133045272 -33605024 - L1_Mur3 LINE L1 -14 5866 5437 4 1600 2757 236 186 5 chrX 133045296 133046223 -33604073 + L1_Mur3 LINE L1 4720 5813 -67 3 1600 1409 246 23 20 chrX 133046225 133046573 -33603723 + Lx6 LINE L1 6463 6811 -649 4 1600 402 277 15 50 chrX 133046570 133046695 -33603601 + Lx7 LINE L1 6917 7037 -659 4 1600 1073 256 0 0 chrX 133046695 133046918 -33603378 - URR1A DNA MER1_type -3 223 1 4 1600 402 277 15 50 chrX 133046918 133046990 -33603306 + Lx7 LINE L1 7038 7107 -589 4 1600 334 61 20 20 chrX 133046991 133047041 -33603255 - HAL1-3A_ME LINE L1 -832 2026 1977 4 1600 559 224 11 0 chrX 133047042 133047216 -33603080 + (TG)n Simple_repeat Simple_repeat 2 177 0 4 1600 504 253 0 0 chrX 133047235 133047401 -33602895 + (TG)n Simple_repeat Simple_repeat 1 166 0 4 1600 777 271 46 54 chrX 133047401 133047731 -33602565 + Lx6 LINE L1 7115 7680 -16 4 1600 763 285 15 34 chrX 133048164 133048426 -33601870 + Lx9 LINE L1 6712 6968 -676 5 1600 419 278 38 81 chrX 133048470 133048681 -33601615 + Lx9 LINE L1 6993 7194 -450 5 1600 435 217 0 0 chrX 133048680 133048772 -33601524 + Lx9 LINE L1 7404 7495 -149 5 1600 1444 223 22 47 chrX 133049027 133049389 -33600907 + L1_Mur2 LINE L1 2042 2394 -3483 5 1600 2001 240 57 18 chrX 133049398 133049911 -33600385 + Lx5 LINE L1 6515 7047 -3 5 1600 229 354 26 79 chrX 133050362 133050552 -33599744 + B3A SINE B2 3 182 -16 5 1600 4812 22 0 0 chrX 133050946 133051653 -33598643 - L1Md_A LINE L1 -534 6048 5342 5 1600 4781 32 0 0 chrX 133051653 133052225 -33598071 + L1Md_T LINE L1 6056 6582 0 5 1600 510 221 51 3 chrX 133052321 133052445 -33597851 + B1_Mus1 SINE Alu 14 142 -6 5 1600 634 261 0 0 chrX 133053109 133053251 -33597045 - B1_Mus2 SINE Alu 0 147 6 5 1600 7981 36 2 8 chrX 133054083 133055456 -33594840 - L1Md_T LINE L1 0 6582 5247 5 1600 6398 195 28 5 chrX 133055648 133057561 -33592735 - Lx3C LINE L1 0 6976 5008 5 1600 1637 40 10 0 chrX 133057785 133057985 -33592311 - L1Md_F2 LINE L1 -1 6581 6380 6 1600 2798 61 0 0 chrX 133057985 133058327 -33591969 + L1Md_F2 LINE L1 6031 6372 -210 6 1600 351 0 0 0 chrX 133058342 133058381 -33591915 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1600 597 311 51 23 chrX 133058945 133059202 -33591094 - RMER15 LTR ERVL -17 558 295 6 1600 284 309 117 24 chrX 133060165 133060371 -33589925 + MLT1D LTR MaLR 279 503 -2 6 1600 680 115 8 0 chrX 133061901 133062023 -33588273 + (GA)n Simple_repeat Simple_repeat 1 123 0 6 1600 327 49 0 0 chrX 133062770 133062811 -33587485 + (CCA)n Simple_repeat Simple_repeat 1 41 0 6 1600 865 224 16 111 chrX 133063334 133063356 -33586940 + RMER1C Other Other 1031 1045 -297 6 1600 4441 60 2 18 chrX 133063356 133063904 -33586392 + L1Md_F2 LINE L1 6042 6580 -2 6 1600 865 224 16 111 chrX 133063904 133064187 -33586109 + RMER1C Other Other 1046 1307 -35 6 1600 402 185 39 19 chrX 133064772 133064926 -33585370 + (CATATA)n Simple_repeat Simple_repeat 4 160 0 6 1600 3577 5 0 0 chrX 133065062 133065438 -33584858 + L1Md_A LINE L1 6207 6582 0 6 1600 204 40 0 0 chrX 133065451 133065476 -33584820 + (A)n Simple_repeat Simple_repeat 1 25 0 7 1600 739 358 53 25 chrX 133066537 133067019 -33583277 - Lx8 LINE L1 -167 7306 6808 7 1600 2976 84 39 39 chrX 133067019 133067430 -33582866 - RLTR9F LTR ERVK -4 411 1 7 1600 739 358 53 25 chrX 133067430 133067457 -33582839 - Lx8 LINE L1 -666 6807 6783 7 1600 378 0 0 0 chrX 133067994 133068036 -33582260 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1600 573 15 0 0 chrX 133068036 133068101 -33582195 + (GA)n Simple_repeat Simple_repeat 1 66 0 7 1600 315 0 0 0 chrX 133069131 133069166 -33581130 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1600 1018 248 28 28 chrX 133069443 133069959 -33580337 + L1_Mur3 LINE L1 900 1414 -4463 7 1600 712 256 9 14 chrX 133070046 133070216 -33580080 + ID_B1 SINE B4 80 248 -44 7 1600 572 318 39 25 chrX 133070267 133070470 -33579826 + MLT1C LTR MaLR 7 212 -255 7 1600 266 133 65 32 chrX 133070489 133070582 -33579714 + (CA)n Simple_repeat Simple_repeat 1 96 0 7 1600 1431 60 0 0 chrX 133070582 133070832 -33579464 + (CAGG)n Simple_repeat Simple_repeat 1 250 0 8 1600 527 136 13 33 chrX 133070829 133070981 -33579315 + (CA)n Simple_repeat Simple_repeat 2 150 0 8 1600 589 259 174 46 chrX 133070994 133071612 -33578684 + RMER1B Other Other 4 522 -544 8 1600 10646 102 8 3 chrX 133071614 133073058 -33577238 + MERVK26-int LTR ERVK 1677 3127 -3792 8 1600 1895 97 100 9 chrX 133073047 133073387 -33576909 + MERVK26-int LTR ERVK 5191 5561 -1358 8 1600 1188 147 0 10 chrX 133073387 133073587 -33576709 - MusHAL1 LINE L1 -1649 1063 866 8 1600 1027 233 28 0 chrX 133073606 133073855 -33576441 - Lx6 LINE L1 -689 6771 6516 8 1600 284 207 31 133 chrX 133073855 133073983 -33576313 + RLTR22_Mur LTR ERVK 1483 1597 -251 8 1600 362 320 131 31 chrX 133074689 133075041 -33575255 + L1M5 LINE L1 4464 4850 -1296 8 1600 271 370 44 15 chrX 133075049 133075186 -33575110 - B1F2 SINE Alu -8 141 1 8 1600 623 191 42 8 chrX 133075301 133075470 -33574826 + B2_Mm2 SINE B2 3 187 -6 8 1600 376 277 151 72 chrX 133075514 133075806 -33574490 + L1MD LINE L1 5019 5333 -813 9 1600 405 245 30 30 chrX 133076013 133076114 -33574182 + PB1D10 SINE Alu 12 112 -5 9 1600 7769 112 11 2 chrX 133076130 133077276 -33573020 - L1_Mm LINE L1 -2408 3475 2319 9 1600 3881 74 4 14 chrX 133077278 133077378 -33572918 + L1_Mus2 LINE L1 6077 6176 -390 9 1600 1251 195 132 40 chrX 133077378 133077682 -33572614 + IAPEY3_LTR LTR ERVK 1 332 0 9 1600 3881 74 4 14 chrX 133077682 133078075 -33572221 + L1_Mus2 LINE L1 6177 6565 -1 9 1600 354 107 0 0 chrX 133078116 133078172 -33572124 + (CAA)n Simple_repeat Simple_repeat 2 57 0 9 1600 290 235 14 29 chrX 133079014 133079084 -33571212 - tRNA-Ala-GCY_ tRNA tRNA -3 72 4 9 1600 1410 279 46 8 chrX 133080899 133081289 -33569007 - Lx6 LINE L1 -4 7456 7052 9 1600 4360 233 27 70 chrX 133081315 133082214 -33568082 + Lx6 LINE L1 5563 6395 -1065 9 1600 369 0 0 0 chrX 133082214 133082255 -33568041 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 1600 405 0 0 0 chrX 133082255 133082299 -33567997 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 1600 4360 238 30 80 chrX 133082299 133082777 -33567519 + Lx6 LINE L1 6396 6877 -583 9 1600 750 278 53 5 chrX 133084037 133084243 -33566053 - B3 SINE B2 0 216 1 1 1600 897 229 27 0 chrX 133084286 133084474 -33565822 + B3 SINE B2 24 216 0 1 1600 862 240 51 42 chrX 133085232 133085449 -33564847 - RMER21B LTR ERV1 0 842 624 1 1600 439 236 56 24 chrX 133085449 133085575 -33564721 + RMER21B LTR ERV1 188 317 -525 1 1600 194 0 39 0 chrX 133085637 133085663 -33564633 + (CCCA)n Simple_repeat Simple_repeat 1 27 0 1 1600 340 244 0 0 chrX 133086290 133086372 -33563924 + RMER21B LTR ERV1 205 286 -556 1 1600 524 115 47 19 chrX 133086378 133086484 -33563812 + RMER21B LTR ERV1 188 296 -546 1 1600 409 224 16 65 chrX 133086455 133086579 -33563717 + RMER21B LTR ERV1 171 288 -554 1 1600 516 216 8 96 chrX 133086582 133086829 -33563467 + RMER21B LTR ERV1 188 355 -487 1 1600 512 196 9 18 chrX 133086833 133086947 -33563349 + RMER21B LTR ERV1 191 303 -539 1 1600 363 211 0 0 chrX 133086949 133087025 -33563271 + RMER21B LTR ERV1 202 277 -565 1 1600 1346 266 89 43 chrX 133087033 133087470 -33562826 + RMER21B LTR ERV1 220 676 -166 1 1600 246 343 28 19 chrX 133088132 133088239 -33562057 - Lx6 LINE L1 -305 7155 7048 1 1600 583 97 0 0 chrX 133088263 133088335 -33561961 + tRNA-Ala-GCA tRNA tRNA 1 72 -3 1 1600 236 177 0 46 chrX 133089189 133089254 -33561042 + T-rich Low_complexity Low_complexity 2 63 0 1 1600 226 234 21 0 chrX 133089265 133089312 -33560984 - PB1D10 SINE Alu -52 65 18 1 1600 324 313 122 37 chrX 133089506 133089801 -33560495 - L1MDa LINE L1 -810 5727 5408 1 1600 853 214 16 16 chrX 133089849 133090039 -33560257 - B2_Mm2 SINE B2 -4 191 2 1 1600 237 326 11 0 chrX 133090056 133090145 -33560151 - L1MD LINE L1 -1208 4938 4849 1 1600 240 100 0 0 chrX 133090903 133090943 -33559353 + (TATG)n Simple_repeat Simple_repeat 3 42 0 1 1600 271 393 60 22 chrX 133091134 133091318 -33558978 + MIRc SINE MIR 58 249 -13 1 1600 1602 147 51 128 chrX 133091918 133092309 -33557987 + RMER1B Other Other 702 1062 -4 1 1600 262 320 81 19 chrX 133093028 133093238 -33557058 - L1MDa LINE L1 -1556 4981 4759 1 1600 1155 238 88 93 chrX 133093642 133094179 -33556117 + RMER5 LTR ERV1 1 534 0 1 1600 186 43 0 0 chrX 133094207 133094230 -33556066 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1600 340 296 103 19 chrX 133095389 133095481 -33554815 - RLTR20A1 LTR ERVK 0 551 448 1 1600 366 42 0 0 chrX 133095481 133095529 -33554767 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1600 535 256 196 58 chrX 133095529 133095900 -33554396 - RLTR20A1 LTR ERVK -104 447 1 1 1600 464 216 0 7 chrX 133095986 133096140 -33554156 + (CACAC)n Simple_repeat Simple_repeat 5 157 0 1 1600 238 145 16 31 chrX 133096152 133096216 -33554080 + (CACAC)n Simple_repeat Simple_repeat 2 64 0 1 1600 371 334 81 87 chrX 133096289 133096758 -33553538 - L1MDa LINE L1 -4545 2088 1623 1 1600 1338 109 16 11 chrX 133096811 133096997 -33553299 - B2_Mm2 SINE B2 -7 188 2 1 1600 513 125 0 0 chrX 133097087 133097175 -33553121 + (CA)n Simple_repeat Simple_repeat 1 88 0 1 1600 1637 204 101 43 chrX 133097341 133097574 -33552722 - MTC LTR MaLR -3 418 197 1 1600 2065 49 4 0 chrX 133097574 133097818 -33552478 - L1Md_F3 LINE L1 -14 6570 6326 1 1600 1637 204 101 43 chrX 133097818 133097979 -33552317 - MTC LTR MaLR -225 196 1 1 1600 359 333 27 27 chrX 133098048 133098159 -33552137 - B1F2 SINE Alu -36 113 3 1 1600 3819 96 9 0 chrX 133098499 133099028 -33551268 - L1_Mm LINE L1 -135 5748 5215 1 1600 10462 49 1 17 chrX 133099021 133100330 -33549966 + L1Md_T LINE L1 4299 5586 -297 1 1600 9528 8 0 0 chrX 133100330 133101326 -33548970 + L1Md_T LINE L1 5587 6582 0 1 1600 6385 74 1 2 chrX 133101324 133102113 -33548183 + L1Md_F2 LINE L1 5783 6570 -12 1 1600 225 0 0 0 chrX 133102175 133102200 -33548096 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1600 534 125 0 0 chrX 133102403 133102475 -33547821 - tRNA-Ala-GCG tRNA tRNA -3 72 1 1 1600 577 97 0 0 chrX 133103784 133103856 -33546440 + tRNA-Ala-GCA tRNA tRNA 1 72 -3 1 1600 540 83 0 14 chrX 133104301 133104374 -33545922 + tRNA-Ala-GCG tRNA tRNA 1 72 -3 1 1600 189 0 0 0 chrX 133104570 133104591 -33545705 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 1 1600 841 169 59 48 chrX 133104778 133104965 -33545331 - B2_Mm2 SINE B2 -5 190 2 1 1600 275 296 81 7 chrX 133105326 133105462 -33544834 - L1M5 LINE L1 -1555 4591 4446 1 1600 258 213 0 0 chrX 133105955 133106002 -33544294 + RMER5 LTR ERV1 13 59 -475 1 1600 465 320 87 70 chrX 133106221 133106463 -33543833 - B4A SINE B4 -23 269 24 1 1600 2532 175 83 58 chrX 133106467 133107363 -33542933 - RLTR13D1 LTR ERVK 0 855 1 1 1600 1743 237 98 51 chrX 133108002 133108607 -33541689 + RMER21B LTR ERV1 1 633 -209 1 1600 239 189 26 26 chrX 133108645 133108721 -33541575 + (TAAA)n Simple_repeat Simple_repeat 2 77 0 1 1600 5543 88 7 0 chrX 133108731 133110009 -33540287 + L1VL4 LINE L1 217 1503 -2056 1 1600 5918 180 72 13 chrX 133110787 133112043 -33538253 + L1_Mur2 LINE L1 1855 3184 -2693 1 1600 1034 121 4 0 chrX 133112046 133112321 -33537975 + (TTTC)n Simple_repeat Simple_repeat 1 276 0 1 1600 450 274 200 61 chrX 133112339 133112619 -33537677 + MTB_Mm LTR MaLR 35 353 -54 1 1600 252 0 0 0 chrX 133112674 133112702 -33537594 + (TTAA)n Simple_repeat Simple_repeat 2 29 0 1 1600 233 322 181 11 chrX 133112928 133113022 -33537274 - B3 SINE B2 -66 150 41 1 1600 1029 258 127 12 chrX 133113075 133113405 -33536891 + ORR1D2 LTR MaLR 1 368 -2 1 1600 736 321 23 33 chrX 133113407 133113710 -33536586 + ORR1D2-int LTR MaLR 1 300 -1070 1 1600 1491 207 18 22 chrX 133113711 133114083 -33536213 - Lx6 LINE L1 -1525 5935 5563 1 1600 918 260 37 22 chrX 133114152 133114423 -33535873 + Lx6 LINE L1 7182 7456 -4 1 1600 2505 116 13 0 chrX 133114781 133115160 -33535136 + L1_Mm LINE L1 4057 4440 -1443 1 1600 6955 59 2 3 chrX 133115158 133116499 -33533797 + L1Md_F LINE L1 390 1729 -4154 1 1600 2772 56 0 0 chrX 133116494 133116831 -33533465 + L1Md_F3 LINE L1 5250 5586 -297 1 1600 8572 40 12 0 chrX 133116832 133117804 -33532492 + L1Md_F3 LINE L1 5588 6571 -13 1 1600 2677 197 80 20 chrX 133117804 133118413 -33531883 + Lx3C LINE L1 6348 7000 0 1 1600 280 307 11 0 chrX 133119225 133119313 -33530983 - Lx6 LINE L1 -305 7155 7067 1 1600 275 324 0 0 chrX 133119357 133119428 -33530868 + tRNA-Ala-GCG tRNA tRNA 2 72 -3 1 1600 195 42 0 0 chrX 133119822 133119846 -33530450 + (TTC)n Simple_repeat Simple_repeat 2 25 0 1 1600 6093 72 30 5 chrX 133119846 133120666 -33529630 - L1_Mus2 LINE L1 0 6566 5726 1 1600 270 333 0 0 chrX 133120649 133120742 -33529554 - L1_Mur3 LINE L1 -1541 4339 4247 1 1600 1341 180 35 19 chrX 133120939 133121250 -33529046 - RLTR22_Mur LTR ERVK -1201 647 332 1 1600 1247 263 31 17 chrX 133121258 133121610 -33528686 + Lx6 LINE L1 7100 7456 -4 1 1600 9943 88 2 10 chrX 133122010 133124143 -33526153 + L1_Mus1 LINE L1 4452 6567 0 1 1600 349 292 88 0 chrX 133124776 133124889 -33525407 - Lx6 LINE L1 -300 7160 7038 1 1600 607 83 0 0 chrX 133124903 133124975 -33525321 + tRNA-Ala-GCA tRNA tRNA 1 72 -3 1 1600 215 61 30 0 chrX 133125816 133125849 -33524447 + (TTTC)n Simple_repeat Simple_repeat 2 35 0 1 1600 389 255 28 19 chrX 133125859 133125967 -33524329 - PB1D7 SINE Alu -1 119 11 1 1600 976 261 80 93 chrX 133126115 133126575 -33523721 + RMER5 LTR ERV1 81 534 0 1 1600 306 0 0 0 chrX 133126602 133126636 -33523660 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1600 302 280 148 10 chrX 133126854 133127063 -33523233 - L1MC4 LINE L1 -840 7202 6965 1 1600 337 196 31 18 chrX 133127400 133127497 -33522799 - MT2B2 LTR ERVL -246 355 258 1 1600 1414 248 19 9 chrX 133127539 133127905 -33522391 - MT2A LTR ERVL -128 405 1 1 1600 582 317 29 10 chrX 133128487 133128694 -33521602 - B3 SINE B2 -5 211 1 1 1600 924 243 0 24 chrX 133128953 133129160 -33521136 + B3 SINE B2 1 202 -14 1 1600 317 202 0 35 chrX 133131372 133131459 -33518837 - Lx3C LINE L1 -2 6974 6891 1 1600 202 343 47 50 chrX 133131976 133132234 -33518062 - L2 LINE L2 -581 2838 2582 1 1600 3498 40 34 43 chrX 133132499 133132939 -33517357 + RLTR10C LTR ERVK 1 436 0 1 1600 336 48 0 0 chrX 133133752 133133794 -33516502 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1600 294 234 0 0 chrX 133134697 133134804 -33515492 + (TG)n Simple_repeat Simple_repeat 2 108 0 1 1600 284 345 130 34 chrX 133134828 133135005 -33515291 - B4A SINE B4 -18 274 81 1 1600 399 338 87 70 chrX 133135646 133135888 -33514408 - B4A SINE B4 -23 269 24 1 1600 2533 155 80 46 chrX 133135892 133136625 -33513671 - RLTR13D1 LTR ERVK 0 855 190 1 1600 7394 48 1 0 chrX 133136625 133137522 -33512774 - L1_Mm LINE L1 -385 5498 4601 1 1600 4564 47 2 2 chrX 133137523 133138051 -33512245 + L1Md_F3 LINE L1 6054 6581 -3 1 1600 640 191 29 29 chrX 133138079 133138219 -33512077 - RLTR13D1 LTR ERVK -610 193 54 1 1600 522 202 120 110 chrX 133138221 133138421 -33511875 + RMER21B LTR ERV1 515 716 -126 1 1600 2847 215 35 22 chrX 133138709 133139183 -33511113 - Lx6 LINE L1 -582 6878 6407 1 1600 189 94 0 0 chrX 133139183 133139215 -33511081 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1600 2847 215 35 22 chrX 133139215 133139387 -33510909 - Lx6 LINE L1 -1054 6406 6223 1 1600 342 0 0 0 chrX 133139392 133139430 -33510866 + (TC)n Simple_repeat Simple_repeat 2 39 0 1 1600 234 0 0 0 chrX 133139430 133139455 -33510841 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1600 945 272 96 39 chrX 133139458 133139634 -33510662 - Lx6 LINE L1 -1068 6392 6218 1 1600 414 39 0 0 chrX 133139634 133139686 -33510610 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 1600 945 272 96 39 chrX 133139686 133139925 -33510371 - Lx6 LINE L1 -1243 6217 5955 1 1600 911 198 5 11 chrX 133139896 133140080 -33510216 - Lx6 LINE L1 -135 5745 5563 1 1600 1389 258 65 10 chrX 133140106 133140162 -33510134 + Lx6 LINE L1 7052 7117 -343 1 1600 432 0 0 0 chrX 133140162 133140210 -33510086 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1600 1389 258 65 10 chrX 133140210 133140537 -33509759 + Lx6 LINE L1 7118 7455 -5 1 1600 360 262 58 10 chrX 133141549 133141653 -33508643 - Lx6 LINE L1 -300 7160 7052 1 1600 390 159 0 0 chrX 133141681 133141744 -33508552 + tRNA-Ala-GCA tRNA tRNA 1 63 -12 1 1600 378 0 0 0 chrX 133142511 133142553 -33507743 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 1600 396 252 28 18 chrX 133142566 133142675 -33507621 - PB1D7 SINE Alu 0 120 11 2 1600 974 264 81 89 chrX 133142823 133143281 -33507015 + RMER5 LTR ERV1 81 534 0 2 1600 234 0 0 0 chrX 133143308 133143334 -33506962 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1600 236 267 38 9 chrX 133143659 133143765 -33506531 - L1MC4 LINE L1 -969 7073 6965 2 1600 275 271 34 34 chrX 133144469 133144618 -33505678 - L1MDa LINE L1 -4397 2236 2088 2 1600 2136 138 6 15 chrX 133144674 133145004 -33505292 - ORR1A2 LTR MaLR 0 327 1 2 1600 399 331 106 38 chrX 133145424 133145688 -33504608 + MER89 LTR ERV1 268 549 -10 2 1600 232 329 57 57 chrX 133145705 133145882 -33504414 + LTR41B LTR ERVL 403 579 -179 2 1600 21 0 0 0 chrX 133146256 133146277 -33504019 + AT_rich Low_complexity Low_complexity 1 21 0 2 1600 773 245 24 7 chrX 133146413 133146640 -33503656 - L1_Mur3 LINE L1 -1894 4246 3987 2 1600 2408 174 22 2 chrX 133146641 133147045 -33503251 - MTC LTR MaLR -8 413 2 2 1600 1350 258 60 74 chrX 133147047 133147562 -33502734 - L1_Mur3 LINE L1 -1887 3993 3486 2 1600 423 248 30 53 chrX 133147603 133147735 -33502561 - L1M4 LINE L1 -391 5789 5661 2 1600 1200 75 0 0 chrX 133147762 133147909 -33502387 + B1_Mus1 SINE Alu 1 147 -1 2 1600 270 0 0 0 chrX 133147950 133147980 -33502316 + (TC)n Simple_repeat Simple_repeat 2 31 0 2 1600 342 0 0 0 chrX 133147980 133148017 -33502279 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1600 243 61 0 0 chrX 133148017 133148050 -33502246 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 1600 806 224 39 39 chrX 133148051 133148232 -33502064 - B3 SINE B2 -32 184 4 2 1600 602 292 21 50 chrX 133148244 133148482 -33501814 - L1M4 LINE L1 -581 5602 5372 2 1600 269 295 169 0 chrX 133148614 133148780 -33501516 - L1M4 LINE L1 -1944 4202 4009 2 1600 772 287 20 78 chrX 133149249 133149544 -33500752 + B4A SINE B4 1 278 -14 2 1600 1507 209 139 14 chrX 133149914 133150273 -33500023 + MTD LTR MaLR 14 417 -2 2 1600 22 0 0 0 chrX 133150373 133150395 -33499901 + AT_rich Low_complexity Low_complexity 1 22 0 2 1600 328 267 33 0 chrX 133150636 133150726 -33499570 + LTR75 LTR ERVL 216 308 -254 2 1600 530 309 59 88 chrX 133152154 133152306 -33497990 + B4 SINE B4 7 144 -148 2 1600 4499 135 90 8 chrX 133152306 133153054 -33497242 + RMER17D2 LTR ERVK 1 809 0 2 1600 530 309 59 88 chrX 133153054 133153174 -33497122 + B4 SINE B4 145 271 -21 2 1600 439 294 28 3 chrX 133153264 133153530 -33496766 + L1MA4 LINE L1 5531 5875 -428 2 1600 689 273 0 7 chrX 133153997 133154148 -33496148 - B3A SINE B2 -48 150 1 2 1600 200 114 0 28 chrX 133155080 133155116 -33495180 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2 1600 701 196 71 14 chrX 133155117 133155257 -33495039 - B1_Mur2 SINE Alu -1 148 1 2 1600 183 156 0 0 chrX 133155276 133155308 -33494988 + CT-rich Low_complexity Low_complexity 1 32 0 2 1600 183 42 0 0 chrX 133155522 133155546 -33494750 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 1600 278 361 57 18 chrX 133155586 133155865 -33494431 - L1M3 LINE L1 -3428 2712 2423 2 1600 378 321 65 12 chrX 133156654 133156824 -33493472 + L1MD3 LINE L1 7416 7594 -401 2 1600 851 270 59 14 chrX 133156881 133157238 -33493058 + L1MB7 LINE L1 5585 5957 -227 2 1600 229 306 17 155 chrX 133157269 133157385 -33492911 + B1F SINE Alu 22 121 -28 2 1600 610 82 20 0 chrX 133157405 133157503 -33492793 + (TA)n Simple_repeat Simple_repeat 2 101 0 2 1600 538 288 17 0 chrX 133157680 133157798 -33492498 - PB1D7 SINE Alu 0 120 1 2 1600 6101 156 52 5 chrX 133157848 133158857 -33491439 + Lx9 LINE L1 6587 7643 -1 2 1600 328 304 21 8 chrX 133160227 133160240 -33490056 + ID_B1 SINE B4 82 126 -98 2 1600 419 276 28 9 chrX 133160240 133160346 -33489950 + B1F1 SINE Alu 10 117 -32 2 1600 328 304 21 8 chrX 133160346 133160370 -33489926 + ID_B1 SINE B4 127 223 -1 2 1600 189 361 34 58 chrX 133161619 133161825 -33488471 + MIR SINE MIR 31 231 -31 2 1600 818 200 36 56 chrX 133162952 133163148 -33487148 - B2_Mm2 SINE B2 -3 192 1 2 1600 1953 136 107 28 chrX 133163305 133163661 -33486635 - ORR1C2 LTR MaLR 0 384 1 2 1600 443 216 11 0 chrX 133163744 133163832 -33486464 + B3A SINE B2 6 94 -104 2 1600 1514 105 0 0 chrX 133163832 133164032 -33486264 - Lx4A LINE L1 -533 6525 6326 2 1600 21 71 0 0 chrX 133164040 133164082 -33486214 + AT_rich Low_complexity Low_complexity 1 42 0 2 1600 225 338 0 0 chrX 133164089 133164157 -33486139 + ID4_ SINE ID 2 69 -14 2 1600 870 107 0 0 chrX 133166102 133166223 -33484073 - MTB LTR MaLR 0 400 280 2 1600 229 30 0 0 chrX 133166436 133166469 -33483827 - L1Md_F2 LINE L1 -14 6568 6536 2 1600 5199 36 2 0 chrX 133166469 133167049 -33483247 - L1Md_T LINE L1 -1 6581 6001 2 1600 6042 52 0 1 chrX 133167056 133167826 -33482470 - L1Md_F2 LINE L1 -31 6551 5783 2 1600 7984 35 7 0 chrX 133167822 133169052 -33481244 - L1Md_F3 LINE L1 -14 6570 5335 2 1601 467 299 134 38 chrX 133169212 133169473 -33480823 + L1M2 LINE L1 2795 3080 -3063 2 1601 319 298 8 0 chrX 133169708 133169829 -33480467 + L1MC4 LINE L1 7104 7225 -817 2 1601 219 114 0 0 chrX 133170024 133170059 -33480237 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 2 1601 845 267 81 46 chrX 133170294 133170708 -33479588 + MLT2B4 LTR ERVL 1 424 -40 2 1601 493 15 30 0 chrX 133170708 133170774 -33479522 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 2 1601 749 275 107 94 chrX 133170774 133170817 -33479479 + MLT2B4 LTR ERVL 425 464 0 2 1601 207 161 0 0 chrX 133171592 133171648 -33478648 + T-rich Low_complexity Low_complexity 1 56 0 2 1601 832 185 14 7 chrX 133171648 133171795 -33478501 - B1_Mur4 SINE Alu 0 150 3 2 1601 680 347 75 36 chrX 133172075 133172353 -33477943 - MER21B LTR ERV1 -302 561 273 2 1601 237 263 182 0 chrX 133173299 133173425 -33476871 + L1M1 LINE L1 5739 5888 -415 2 1601 1159 49 7 0 chrX 133173425 133173567 -33476729 + B1_Mus1 SINE Alu 1 143 -5 2 1601 218 156 22 0 chrX 133173586 133173631 -33476665 + GA-rich Low_complexity Low_complexity 4 49 0 2 1601 216 67 0 0 chrX 133173675 133173705 -33476591 + (TAA)n Simple_repeat Simple_repeat 2 31 0 2 1601 237 251 55 4 chrX 133174104 133174197 -33476099 - MIRb SINE MIR -54 208 109 2 1601 189 74 0 0 chrX 133174394 133174421 -33475875 + (G)n Simple_repeat Simple_repeat 1 27 0 2 1601 423 320 26 39 chrX 133175425 133175578 -33474718 + RSINE1 SINE B4 2 152 -13 2 1601 600 14 0 0 chrX 133175582 133175651 -33474645 + (TC)n Simple_repeat Simple_repeat 2 70 0 2 1601 222 105 0 0 chrX 133175667 133175705 -33474591 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1601 3254 88 13 40 chrX 133175870 133176346 -33473950 + L1_Mus2 LINE L1 6090 6552 -14 2 1601 648 280 0 20 chrX 133177120 133177273 -33473023 + B3A SINE B2 1 150 -48 2 1601 353 277 58 11 chrX 133177680 133177923 -33472373 - L1MA4 LINE L1 -348 5964 5708 2 1601 533 310 48 84 chrX 133178137 133178234 -33472062 - B4A SINE B4 -45 247 149 2 1601 4220 139 84 9 chrX 133178234 133178987 -33471309 - RMER17D2 LTR ERVK 0 809 1 2 1601 533 310 48 84 chrX 133178987 133179139 -33471157 - B4A SINE B4 -144 148 7 2 1601 330 307 26 0 chrX 133180529 133180643 -33469653 - LTR75 LTR ERVL -230 332 216 2 1601 277 250 14 0 chrX 133181751 133181823 -33468473 + L1M4 LINE L1 4011 4083 -2063 2 1601 225 299 15 0 chrX 133182024 133182091 -33468205 + B2_Mm2 SINE B2 20 87 -108 2 1601 408 88 0 0 chrX 133182123 133182180 -33468116 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 2 1601 592 248 51 7 chrX 133182213 133182351 -33467945 + B3A SINE B2 4 147 -51 2 1601 1410 254 81 90 chrX 133182378 133182958 -33467338 - RMER15 LTR ERVL 0 575 1 2 1601 4220 64 11 7 chrX 133182976 133183528 -33466768 - L1_Mus1 LINE L1 0 6567 6014 2 1601 370 125 0 0 chrX 133183528 133183584 -33466712 + L1Md_F2 LINE L1 5531 5586 -297 2 1601 8130 40 1 2 chrX 133183585 133184564 -33465732 + L1Md_F2 LINE L1 5588 6565 -17 2 1601 25 0 0 0 chrX 133184566 133184591 -33465705 + AT_rich Low_complexity Low_complexity 1 25 0 2 1601 37 39 0 0 chrX 133184617 133184668 -33465628 + AT_rich Low_complexity Low_complexity 1 51 0 2 1601 28475 59 0 2 chrX 133184694 133189275 -33461021 - L1Md_F2 LINE L1 -1 6581 2009 2 1601 670 197 22 128 chrX 133189297 133189477 -33460819 - B3A SINE B2 0 198 38 2 1601 1017 277 76 43 chrX 133189496 133190126 -33460170 - L1MCa LINE L1 -3023 3298 2648 2 1601 198 0 0 0 chrX 133190130 133190152 -33460144 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 1601 1229 225 60 99 chrX 133190173 133190558 -33459738 + MTE2a LTR MaLR 1 370 -9 2 1601 630 65 0 0 chrX 133190571 133190663 -33459633 + (TG)n Simple_repeat Simple_repeat 2 93 0 2 1601 497 314 12 19 chrX 133190745 133190907 -33459389 - RSINE1 SINE B4 0 165 5 2 1601 908 271 14 5 chrX 133190910 133191132 -33459164 - B4 SINE B4 -66 226 3 2 1601 356 223 184 14 chrX 133191487 133191628 -33458668 - L1MCa LINE L1 -4608 1900 1736 2 1601 512 320 0 26 chrX 133191683 133191837 -33458459 - RSINE1 SINE B4 -13 152 3 2 1601 359 246 74 30 chrX 133191837 133192079 -33458217 - L1MCa LINE L1 -4574 1843 1522 2 1601 453 240 188 29 chrX 133192175 133192415 -33457881 - L1MCa LINE L1 -5143 1365 1088 2 1601 319 286 50 0 chrX 133192618 133192804 -33457492 - L1MA4 LINE L1 -382 5918 5713 2 1601 234 271 45 45 chrX 133192937 133193049 -33457247 + (CATG)n Simple_repeat Simple_repeat 3 114 0 2 1601 266 0 29 0 chrX 133193477 133193511 -33456785 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 2 1601 40 0 0 0 chrX 133193647 133193687 -33456609 + AT_rich Low_complexity Low_complexity 1 40 0 2 1601 276 268 0 53 chrX 133193723 133193798 -33456498 - PB1D10 SINE Alu 0 117 47 2 1601 2196 70 10 10 chrX 133193835 133194140 -33456156 + L1_Mus1 LINE L1 6263 6567 0 2 1601 267 292 6 77 chrX 133194142 133194298 -33455998 + L1MB7 LINE L1 5988 6132 -52 2 1601 287 380 26 0 chrX 133194304 133194417 -33455879 + PB1D10 SINE Alu 1 116 -1 2 1601 789 319 94 95 chrX 133194453 133194696 -33455600 - L1MEg LINE L1 -1812 4334 4089 2 1601 1119 233 42 117 chrX 133194696 133195105 -33455191 + MTE2a LTR MaLR 1 378 -1 3 1601 789 319 94 95 chrX 133195105 133195503 -33454793 - L1MEg LINE L1 -2058 4088 3649 2 1601 842 226 113 0 chrX 133195503 133195689 -33454607 + B3 SINE B2 1 207 -9 3 1601 789 319 94 95 chrX 133195689 133195932 -33454364 - L1MEg LINE L1 -2498 3648 3450 2 1601 259 330 105 11 chrX 133195940 133196035 -33454261 + PB1D10 SINE Alu 9 112 -5 3 1601 293 273 25 38 chrX 133196048 133196128 -33454168 + ID4_ SINE ID 5 83 0 3 1601 677 290 98 90 chrX 133196134 133196665 -33453631 - L1MEg LINE L1 -2691 3455 2921 2 1601 1507 192 97 20 chrX 133196665 133197006 -33453290 + ORR1D1 LTR MaLR 6 372 -2 3 1601 23 33 0 0 chrX 133197361 133197391 -33452905 + AT_rich Low_complexity Low_complexity 1 30 0 3 1601 739 196 28 0 chrX 133197499 133197642 -33452654 - B1_Mur2 SINE Alu 0 149 3 3 1601 922 212 61 0 chrX 133197666 133197864 -33452432 - B3 SINE B2 -6 210 1 3 1601 1319 279 20 28 chrX 133198339 133198696 -33451600 - MTE2b LTR MaLR 0 379 26 3 1601 236 269 139 35 chrX 133198724 133199063 -33451233 - L1MEg LINE L1 -4515 1727 1354 2 1601 1775 182 77 28 chrX 133199100 133199334 -33450962 + RLTR14 LTR ERV1 3 229 -153 3 1601 432 0 0 0 chrX 133199334 133199382 -33450914 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1601 1775 182 77 28 chrX 133199382 133199509 -33450787 + RLTR14 LTR ERV1 230 381 -1 3 1601 514 309 43 125 chrX 133199518 133199983 -33450313 - MER44C DNA MER2_type -9 724 293 3 1601 1059 58 0 0 chrX 133200191 133200329 -33449967 + L1Md_F2 LINE L1 6432 6569 -13 3 1601 265 283 156 16 chrX 133200329 133200451 -33449845 - L2 LINE L2 -1057 2362 2224 3 1601 434 282 102 8 chrX 133200512 133200630 -33449666 - ID_B1 SINE B4 -17 207 79 3 1601 307 311 40 24 chrX 133200537 133200662 -33449634 - MT2B LTR ERVL -344 257 131 3 1601 196 265 61 0 chrX 133203377 133203426 -33446870 + MIRb SINE MIR 127 178 -90 3 1601 2198 171 111 23 chrX 133204281 133204760 -33445536 + RMER5 LTR ERV1 14 534 0 3 1601 719 252 76 72 chrX 133204926 133205358 -33444938 - L1MB8 LINE L1 -55 6123 5690 3 1601 25 31 0 0 chrX 133205953 133205985 -33444311 + AT_rich Low_complexity Low_complexity 1 32 0 3 1601 768 161 6 12 chrX 133206675 133206839 -33443457 + (TA)n Simple_repeat Simple_repeat 2 164 0 3 1601 33 0 0 0 chrX 133206845 133206878 -33443418 + AT_rich Low_complexity Low_complexity 1 33 0 3 1601 1168 68 0 0 chrX 133207167 133207314 -33442982 + B1_Mm SINE Alu 1 147 0 3 1601 270 0 0 0 chrX 133207314 133207344 -33442952 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1601 8289 17 0 3 chrX 133207425 133208357 -33441939 - RLTR13B3 LTR ERVK 0 929 1 3 1601 212 0 36 0 chrX 133208511 133208539 -33441757 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1601 1198 214 50 85 chrX 133208557 133208955 -33441341 + ORR1C2 LTR MaLR 1 384 0 3 1601 1166 272 91 6 chrX 133209695 133210024 -33440272 - MTE2b LTR MaLR 0 379 23 3 1601 2660 276 125 40 chrX 133210050 133210935 -33439361 - MTE2b-int LTR MaLR -5 1575 615 3 1601 4156 240 58 6 chrX 133210935 133211917 -33438379 - MERVL_2A-int LTR ERVL -1659 4102 3068 3 1601 1132 283 14 108 chrX 133211917 133212333 -33437963 + MTE2b LTR MaLR 1 377 -2 3 1601 4156 240 58 6 chrX 133212333 133212413 -33437883 - MERVL_2A-int LTR ERVL -2694 3067 2985 3 1601 391 188 0 0 chrX 133212423 133212492 -33437804 + MERVL_2A-int LTR ERVL 4034 4102 -1659 3 1601 372 306 0 90 chrX 133212492 133212614 -33437682 + MTE-int LTR MaLR 615 725 -855 3 1601 392 284 8 8 chrX 133212618 133212735 -33437561 - MERVL_2A-int LTR ERVL -2825 2936 2820 3 1601 414 242 0 10 chrX 133212744 133212844 -33437452 + MERVL_2A-int LTR ERVL 4420 4518 -1243 3 1601 1173 239 67 5 chrX 133212853 133213228 -33437068 + L1MB8 LINE L1 5375 5772 -412 3 1601 354 275 18 18 chrX 133213362 133213473 -33436823 + L1MB8 LINE L1 5944 6054 -124 3 1601 312 247 71 10 chrX 133213513 133213611 -33436685 - LTR48 LTR ERV1 0 787 684 3 1601 183 80 0 0 chrX 133213989 133214014 -33436282 + (TTTTTG)n Simple_repeat Simple_repeat 5 29 0 3 1601 192 77 0 0 chrX 133214133 133214159 -33436137 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 3 1601 620 223 0 0 chrX 133214161 133214273 -33436023 - PB1D9 SINE Alu -6 114 3 3 1601 747 248 97 0 chrX 133214669 133214875 -33435421 - Lx8 LINE L1 -905 6568 6343 3 1601 2275 161 113 13 chrX 133214878 133215331 -33434965 - RMER4B LTR ERVK -3 582 85 3 1601 661 95 11 0 chrX 133215327 133215422 -33434874 - B1_Mus1 SINE Alu -50 98 3 3 1601 696 239 7 0 chrX 133215818 133215960 -33434336 - B1_Mur4 SINE Alu -7 143 1 3 1601 368 231 438 0 chrX 133216160 133216311 -33433985 + L1M4b LINE L1 858 1074 -6260 3 1601 465 299 0 0 chrX 133216532 133216649 -33433647 + PB1D10 SINE Alu 1 117 0 3 1601 305 205 48 0 chrX 133216703 133216786 -33433510 + L1M4b LINE L1 1429 1515 -5819 3 1601 1850 167 12 51 chrX 133216876 133217087 -33433209 - RMER17C LTR ERVK 0 410 207 3 1601 2810 50 0 17 chrX 133217087 133217449 -33432847 + L1Md_F3 LINE L1 6229 6584 0 3 1601 1850 174 17 54 chrX 133217449 133217713 -33432583 - RMER17C LTR ERVK -532 426 16 3 1601 252 0 0 0 chrX 133218113 133218141 -33432155 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 3 1601 432 37 0 0 chrX 133218395 133218449 -33431847 + (TTGG)n Simple_repeat Simple_repeat 2 55 0 3 1601 1138 50 0 7 chrX 133218449 133218589 -33431707 - B1_Mus2 SINE Alu -8 139 1 3 1601 231 185 0 18 chrX 133218740 133218759 -33431537 + (CCA)n Simple_repeat Simple_repeat 2 20 0 3 1601 1404 75 0 26 chrX 133218759 133218951 -33431345 - B2_Mm2 SINE B2 -8 187 1 3 1601 231 185 0 18 chrX 133218951 133218971 -33431325 + (CCA)n Simple_repeat Simple_repeat 3 22 0 3 1601 2402 47 3 0 chrX 133218971 133219271 -33431025 - L1Md_F3 LINE L1 -1 6583 6283 3 1601 231 185 0 18 chrX 133219271 133219285 -33431011 + (CCA)n Simple_repeat Simple_repeat 1 14 0 3 1601 3289 18 2 37 chrX 133219550 133219952 -33430344 - RLTR10 LTR ERVK -2 388 1 3 1601 8270 23 2 2 chrX 133219954 133220949 -33429347 - RLTR10-int LTR ERVK -3 1984 990 3 1601 307 253 161 20 chrX 133221031 133221180 -33429116 - RLTR10-int LTR ERVK -5987 1594 1462 3 1601 6714 49 60 2 chrX 133221225 133222131 -33428165 - RLTR10-int LTR ERVK -989 998 41 3 1601 3276 21 2 37 chrX 133222143 133222545 -33427751 - RLTR10 LTR ERVK -2 388 1 3 1601 648 268 40 85 chrX 133223161 133223361 -33426935 - MLT1A0 LTR MaLR -7 358 168 3 1601 25 31 0 0 chrX 133223469 133223501 -33426795 + AT_rich Low_complexity Low_complexity 1 32 0 3 1601 316 320 48 19 chrX 133223501 133223606 -33426690 - MLT1A0 LTR MaLR -249 116 9 3 1601 436 237 32 26 chrX 133223615 133223771 -33426525 + L1M4 LINE L1 4203 4359 -1787 3 1601 249 385 89 0 chrX 133223799 133223934 -33426362 - MER63A DNA AcHobo -62 148 2 3 1601 387 200 148 28 chrX 133223969 133224077 -33426219 + B1_Mur2 SINE Alu 3 123 -26 3 1601 317 227 139 22 chrX 133224108 133224309 -33425987 + L1M5 LINE L1 3504 3738 -2408 3 1601 248 230 216 12 chrX 133224437 133224604 -33425692 + L1M5 LINE L1 3725 3925 -2221 3 1601 251 206 15 73 chrX 133224706 133224774 -33425522 - RMER10A LTR ERVL -361 81 18 3 1601 289 279 31 5 chrX 133224834 133224967 -33425329 + B1_Mur4 SINE Alu 3 145 -5 3 1601 521 263 32 0 chrX 133224970 133225126 -33425170 + L1MC3 LINE L1 7275 7435 -350 3 1601 282 270 0 0 chrX 133225254 133225328 -33424968 + L1MC3 LINE L1 7668 7741 -44 3 1601 1272 27 0 0 chrX 133225423 133225570 -33424726 + B1_Mus2 SINE Alu 1 147 0 3 1601 240 86 0 0 chrX 133225570 133225605 -33424691 + (A)n Simple_repeat Simple_repeat 1 35 0 3 1601 234 177 48 0 chrX 133226956 133227018 -33423278 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 3 1601 293 290 0 0 chrX 133227019 133227088 -33423208 + (TATG)n Simple_repeat Simple_repeat 4 72 0 3 1601 242 103 13 5 chrX 133227452 133227508 -33422788 - L1Md_T LINE L1 0 7696 7655 3 1601 3996 184 110 47 chrX 133227580 133228472 -33421824 + RMER1B Other Other 5 957 -109 3 1601 396 0 0 0 chrX 133228472 133228516 -33421780 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 3 1601 3996 184 110 47 chrX 133228516 133228619 -33421677 + RMER1B Other Other 958 1062 -4 3 1601 4157 187 65 71 chrX 133228620 133228912 -33421384 - L1Md_T LINE L1 -26 7670 7374 3 1601 342 0 0 0 chrX 133228912 133228950 -33421346 + (GGGAGA)n Simple_repeat Simple_repeat 4 41 0 3 1601 4157 187 65 71 chrX 133228950 133229453 -33420843 - L1Md_T LINE L1 -323 7373 6904 3 1601 198 91 0 0 chrX 133229453 133229486 -33420810 + (TCTCTG)n Simple_repeat Simple_repeat 2 34 0 3 1601 12876 114 34 69 chrX 133229486 133232055 -33418241 - L1Md_T LINE L1 -793 6903 4454 3 1601 471 35 0 0 chrX 133232062 133232119 -33418177 + (TTTTC)n Simple_repeat Simple_repeat 3 59 0 3 1601 919 34 0 8 chrX 133232119 133232229 -33418067 - B1_Mus1 SINE Alu -12 136 27 3 1601 12876 152 28 116 chrX 133232229 133233838 -33416458 - L1Md_T LINE L1 -1427 4453 2838 3 1601 2060 179 223 6 chrX 133234203 133234737 -33415559 - RMER1B Other Other -7 1059 410 3 1601 22 0 0 0 chrX 133234757 133234779 -33415517 + AT_rich Low_complexity Low_complexity 1 22 0 3 1601 324 0 0 0 chrX 133235579 133235615 -33414681 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 1601 261 252 18 18 chrX 133236387 133236496 -33413800 - Lx7 LINE L1 -29 7667 7559 3 1601 228 67 0 0 chrX 133236559 133236589 -33413707 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1601 960 205 29 24 chrX 133236595 133236805 -33413491 - Lx7 LINE L1 -281 7415 7205 3 1601 448 157 48 0 chrX 133237271 133237354 -33412942 + Lx7 LINE L1 7172 7258 -438 3 1601 2102 100 21 15 chrX 133237357 133237692 -33412604 - Lx LINE L1 -7 6647 6311 3 1601 710 63 0 0 chrX 133237709 133237820 -33412476 - L1Md_T LINE L1 0 6582 6472 3 1601 2318 66 7 0 chrX 133237816 133238121 -33412175 - Lx LINE L1 -337 6317 6011 3 1601 1225 240 25 72 chrX 133238124 133238596 -33411700 + Lx7 LINE L1 7247 7696 0 3 1601 818 308 48 4 chrX 133238735 133238963 -33411333 + 7SK RNA RNA 26 263 -68 3 1601 216 0 0 0 chrX 133239623 133239647 -33410649 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 1601 245 349 64 84 chrX 133239651 133239854 -33410442 - LTR31 LTR ERV1 -358 261 63 3 1601 460 225 13 127 chrX 133239954 133240112 -33410184 - B1_Mur1 SINE Alu -9 140 1 3 1601 308 368 27 70 chrX 133240184 133240371 -33409925 - MIRb SINE MIR -1 267 89 3 1601 417 282 96 40 chrX 133241764 133241941 -33408355 - B3A SINE B2 -6 192 6 3 1601 371 275 28 193 chrX 133241956 133242132 -33408164 - B1F2 SINE Alu -1 148 2 3 1601 186 43 0 0 chrX 133244000 133244023 -33406273 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 3 1601 262 246 122 38 chrX 133244056 133244293 -33406003 + L1ME4a LINE L1 5849 6105 -19 3 1601 800 176 183 21 chrX 133244444 133244630 -33405666 - B3 SINE B2 0 216 1 3 1601 656 181 43 0 chrX 133245457 133245573 -33404723 + B1F1 SINE Alu 21 141 -8 3 1601 228 323 21 0 chrX 133245734 133245830 -33404466 + (CATA)n Simple_repeat Simple_repeat 3 100 0 3 1601 3116 86 170 15 chrX 133246069 133246610 -33403686 - Lx LINE L1 -6 6648 6024 3 1601 341 312 7 40 chrX 133246934 133247084 -33403212 - Lx8 LINE L1 -292 7181 7037 3 1601 201 239 0 0 chrX 133247146 133247192 -33403104 + CT-rich Low_complexity Low_complexity 1 46 0 3 1601 730 288 6 0 chrX 133247192 133247369 -33402927 - B3A SINE B2 -20 178 1 3 1601 445 214 54 0 chrX 133247378 133247490 -33402806 - Lx8 LINE L1 -466 7007 6890 3 1601 504 0 0 0 chrX 133247885 133247941 -33402355 + (TAG)n Simple_repeat Simple_repeat 3 58 0 4 1601 188 91 121 0 chrX 133248315 133248348 -33401948 - L4 LINE RTE -14 2015 1979 4 1601 899 246 29 5 chrX 133248507 133248715 -33401581 - B3 SINE B2 -3 213 1 4 1601 195 239 85 155 chrX 133251037 133251166 -33399130 + L4 LINE RTE 1489 1608 -421 4 1601 261 0 0 0 chrX 133251374 133251403 -33398893 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1601 299 269 71 36 chrX 133251897 133252009 -33398287 + Arthur1 DNA Tip100 232 347 -3600 4 1601 424 198 7 147 chrX 133252268 133252291 -33398005 + MT2B LTR ERVL 148 151 -450 4 1601 895 177 0 0 chrX 133252291 133252432 -33397864 + B1_Mur2 SINE Alu 2 142 -7 4 1601 272 330 10 0 chrX 133252510 133252610 -33397686 + Arthur1 DNA Tip100 3269 3369 -578 4 1601 464 254 98 162 chrX 133252740 133253294 -33397002 + Arthur1 DNA Tip100 3389 3906 -41 4 1601 1370 272 61 20 chrX 133253443 133253834 -33396462 + MTD LTR MaLR 13 419 0 4 1601 1402 267 63 23 chrX 133253834 133254309 -33395987 + RMER5 LTR ERV1 41 534 0 4 1601 531 0 0 0 chrX 133254684 133254743 -33395553 + (TC)n Simple_repeat Simple_repeat 1 59 0 4 1601 25 0 0 0 chrX 133255310 133255335 -33394961 + AT_rich Low_complexity Low_complexity 1 25 0 4 1601 606 14 0 0 chrX 133255844 133255915 -33394381 + (CA)n Simple_repeat Simple_repeat 2 72 0 4 1601 294 29 0 0 chrX 133255915 133255949 -33394347 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 1601 366 322 98 33 chrX 133257683 133257866 -33392430 + LTR16B LTR ERVL 261 455 -8 4 1601 245 319 14 0 chrX 133258051 133258120 -33392176 - ID SINE ID -149 75 6 4 1601 1355 133 5 23 chrX 133258550 133258766 -33391530 + URR1B DNA MER1_type 12 223 -2 4 1601 2413 98 3 0 chrX 133259814 133260140 -33390156 - ORR1A2 LTR MaLR 0 327 1 4 1601 482 326 132 29 chrX 133260166 133260447 -33389849 + LTR78 LTR ERV1 861 1170 -134 4 1601 24 0 0 29 chrX 133261196 133261211 -33389085 + AT_rich Low_complexity Low_complexity 1 15 0 4 1601 1171 128 28 0 chrX 133261211 133261390 -33388906 - B2_Mm1t SINE B2 -8 185 2 4 1601 24 0 0 29 chrX 133261390 133261409 -33388887 + AT_rich Low_complexity Low_complexity 1 19 0 4 1601 651 217 50 7 chrX 133261410 133261549 -33388747 - B1_Mur1 SINE Alu -4 145 1 4 1601 754 293 5 35 chrX 133261551 133261749 -33388547 - B3A SINE B2 0 198 7 4 1601 1409 187 107 163 chrX 133261955 133262422 -33387874 - RMER4B LTR ERVK -9 457 17 4 1601 1032 78 20 0 chrX 133262570 133262723 -33387573 + L1Md_F2 LINE L1 6427 6582 0 4 1601 668 117 10 10 chrX 133262849 133262953 -33387343 + ORR1B1 LTR MaLR 16 119 -275 4 1601 801 110 30 30 chrX 133263137 133263268 -33387028 + B1_Mur4 SINE Alu 20 150 0 4 1601 1169 169 14 0 chrX 133263406 133263613 -33386683 + ORR1B1 LTR MaLR 124 333 -61 4 1601 1509 48 5 0 chrX 133263613 133263802 -33386494 - L1Md_T LINE L1 -1 6581 6392 4 1601 2267 32 0 0 chrX 133263802 133264081 -33386215 + L1Md_T LINE L1 6093 6371 -211 4 1601 545 83 0 0 chrX 133264081 133264153 -33386143 + ORR1B1 LTR MaLR 296 367 0 4 1601 397 188 0 68 chrX 133264389 133264445 -33385851 + PB1D9 SINE Alu 22 72 -48 4 1601 1308 156 13 9 chrX 133264445 133264672 -33385624 - MTC LTR MaLR 0 421 194 4 1601 524 220 26 26 chrX 133264683 133264837 -33385459 - Lx6 LINE L1 -21 7439 7286 4 1601 944 187 55 92 chrX 133264837 133265055 -33385241 - MTC LTR MaLR -211 210 1 4 1601 414 174 0 0 chrX 133265056 133265125 -33385171 + B1_Mur3 SINE Alu 74 142 -7 4 1601 585 234 0 0 chrX 133265760 133265871 -33384425 - B3 SINE B2 -105 111 1 4 1601 257 111 45 45 chrX 133265942 133266008 -33384288 + Lx9 LINE L1 7527 7592 -52 4 1601 409 228 206 39 chrX 133267223 133267378 -33382918 - B3A SINE B2 -16 182 2 4 1601 1314 77 28 6 chrX 133271883 133272065 -33378231 + B2_Mm2 SINE B2 1 186 -9 4 1601 288 243 86 0 chrX 133272405 133272475 -33377821 - B1F SINE Alu -69 80 5 4 1601 661 283 38 28 chrX 133273470 133273681 -33376615 - ID_B1 SINE B4 -10 214 2 4 1601 22 0 0 0 chrX 133273898 133273920 -33376376 + AT_rich Low_complexity Low_complexity 1 22 0 4 1601 183 281 100 0 chrX 133274025 133274110 -33376186 - MIR SINE MIR -130 132 40 4 1601 317 261 15 30 chrX 133274642 133274776 -33375520 - L1MC5 LINE L1 -47 7914 7783 4 1601 304 307 131 30 chrX 133275494 133275662 -33374634 - MIRb SINE MIR -39 229 45 4 1601 336 24 0 0 chrX 133276686 133276727 -33373569 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1601 525 165 25 57 chrX 133276917 133277039 -33373257 - PB1D9 SINE Alu 0 120 3 4 1601 198 0 0 0 chrX 133277682 133277704 -33372592 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1601 269 278 82 10 chrX 133277787 133277885 -33372411 + PB1D10 SINE Alu 12 116 -1 4 1601 600 307 49 62 chrX 133278547 133278835 -33371461 - B4A SINE B4 -6 286 3 4 1601 493 289 46 7 chrX 133279013 133279166 -33371130 - B3A SINE B2 0 198 40 4 1601 393 362 12 6 chrX 133279221 133279385 -33370911 + MER5A DNA MER1_type 25 189 0 4 1601 374 239 185 11 chrX 133280468 133280646 -33369650 - MER3 DNA MER1_type 0 209 1 4 1601 355 313 76 25 chrX 133281047 133281165 -33369131 - MIRb SINE MIR -140 128 5 4 1601 231 250 0 0 chrX 133281430 133281474 -33368822 - MER91A DNA Tip100 0 196 153 4 1601 366 290 0 0 chrX 133281840 133281933 -33368363 - B3 SINE B2 -1 215 123 4 1601 1013 228 9 14 chrX 133281966 133282180 -33368116 + B3 SINE B2 4 216 0 4 1601 698 226 8 0 chrX 133284549 133284682 -33365614 - ID_B1 SINE B4 0 224 91 4 1601 250 360 7 41 chrX 133284558 133284703 -33365593 + YREP_Mm Unknown Unknown 186 325 -1487 4 1601 274 340 11 11 chrX 133284946 133285041 -33365255 + L2c LINE L2 3113 3207 -180 4 1601 345 100 0 0 chrX 133285150 133285200 -33365096 + (TCC)n Simple_repeat Simple_repeat 3 52 0 4 1601 579 154 27 0 chrX 133285258 133285368 -33364928 + B1_Mur4 SINE Alu 38 150 0 4 1601 9119 75 0 0 chrX 133286698 133287879 -33362417 - L1_Mm LINE L1 -417 5466 4286 4 1601 194 322 0 0 chrX 133287880 133287939 -33362357 - MIR SINE MIR -126 136 78 4 1601 515 289 35 0 chrX 133290524 133290666 -33359630 + B1F SINE Alu 3 149 0 4 1601 250 152 34 0 chrX 133292551 133292610 -33357686 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 1601 247 289 103 0 chrX 133293227 133293324 -33356972 - MER81 DNA AcHobo -7 107 1 4 1601 196 361 0 0 chrX 133293633 133293705 -33356591 + L2a LINE L2 3347 3418 -8 4 1601 873 161 141 26 chrX 133293937 133294128 -33356168 - B3 SINE B2 -1 215 3 4 1601 318 106 0 0 chrX 133296040 133296087 -33354209 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1601 274 299 0 13 chrX 133296113 133296191 -33354105 - ID4 SINE ID -6 77 1 4 1601 794 188 27 34 chrX 133296842 133296991 -33353305 - B1F2 SINE Alu 0 149 2 4 1601 239 239 29 43 chrX 133298512 133298582 -33351714 - BC1_Mm scRNA scRNA -83 69 1 4 1601 337 331 39 7 chrX 133298591 133298746 -33351550 + MER20 DNA MER1_type 4 163 -56 4 1601 241 310 123 0 chrX 133299423 133299544 -33350752 + L2b LINE L2 3246 3372 -15 4 1602 519 273 116 25 chrX 133300641 133300840 -33349456 - MIRb SINE MIR -8 260 44 4 1602 226 191 43 0 chrX 133301029 133301076 -33349220 + L2c LINE L2 3334 3382 -5 4 1602 249 356 11 22 chrX 133302180 133302269 -33348027 + MIR SINE MIR 20 107 -155 4 1602 238 274 55 0 chrX 133302294 133302367 -33347929 - PB1D10 SINE Alu 0 117 41 4 1602 1345 169 0 4 chrX 133302711 133302937 -33347359 + URR1B DNA MER1_type 1 225 0 4 1602 630 276 0 19 chrX 133303147 133303306 -33346990 - MER2B DNA MER2_type -1 335 180 4 1602 365 265 12 0 chrX 133303338 133303421 -33346875 - RSINE1 SINE B4 -31 134 51 4 1602 3303 24 39 0 chrX 133303429 133303810 -33346486 - MTA_Mm LTR MaLR 0 396 1 4 1602 9251 32 6 2 chrX 133303810 133304903 -33345393 - MTA_Mm-int LTR MaLR 0 1098 1 4 1602 3303 24 39 0 chrX 133304903 133305284 -33345012 - MTA_Mm LTR MaLR 0 396 1 4 1602 3818 60 8 4 chrX 133305393 133305877 -33344419 - L1_Mus3 LINE L1 -2 6636 6151 4 1602 227 364 18 74 chrX 133306184 133306347 -33343949 + MER5A DNA MER1_type 4 157 -32 4 1602 538 254 116 0 chrX 133306940 133307078 -33343218 - RSINE1 SINE B4 -1 164 11 4 1602 250 301 166 14 chrX 133308054 133308199 -33342097 + MIRc SINE MIR 82 248 -20 4 1602 180 319 0 14 chrX 133308726 133308799 -33341497 + MIR SINE MIR 30 101 -107 4 1602 278 261 31 0 chrX 133309565 133309630 -33340666 - ID4_ SINE ID -15 68 2 4 1602 308 359 36 52 chrX 133309630 133309824 -33340472 - MIRb SINE MIR -51 217 27 4 1602 229 191 60 0 chrX 133310788 133310872 -33339424 + Lx6 LINE L1 7329 7417 -43 4 1602 185 273 36 0 chrX 133310906 133310961 -33339335 - MIRc SINE MIR -152 116 60 4 1602 198 0 0 0 chrX 133311181 133311203 -33339093 + (CCTG)n Simple_repeat Simple_repeat 2 23 0 4 1602 839 148 7 0 chrX 133311214 133311363 -33338933 + CT-rich Low_complexity Low_complexity 2 151 0 4 1602 577 306 141 16 chrX 133311599 133311855 -33338441 + B4A SINE B4 5 292 0 4 1602 666 286 197 10 chrX 133312055 133312345 -33337951 - MER2 DNA MER2_type -1 344 1 4 1602 239 277 64 73 chrX 133312348 133312457 -33337839 - MIRb SINE MIR -125 143 36 4 1602 315 49 0 0 chrX 133312740 133312781 -33337515 + (CTG)n Simple_repeat Simple_repeat 1 41 0 4 1602 193 330 20 20 chrX 133313133 133313232 -33337064 + MIR3 SINE MIR 89 187 -21 4 1602 351 0 0 0 chrX 133315503 133315542 -33334754 + (TCC)n Simple_repeat Simple_repeat 2 40 0 4 1602 208 340 0 21 chrX 133315562 133315658 -33334638 + CT-rich Low_complexity Low_complexity 5 98 0 4 1602 323 309 82 0 chrX 133318955 133319065 -33331231 - L2a LINE L2 -9 3417 3299 4 1602 252 258 0 15 chrX 133319367 133319434 -33330862 + CT-rich Low_complexity Low_complexity 3 68 0 5 1602 394 244 112 16 chrX 133320707 133320782 -33329514 + B1F2 SINE Alu 13 88 -61 5 1602 180 0 0 0 chrX 133320782 133320802 -33329494 + (GA)n Simple_repeat Simple_repeat 2 21 0 5 1602 394 244 112 16 chrX 133320802 133320851 -33329445 + B1F2 SINE Alu 89 148 -1 5 1602 216 0 0 0 chrX 133322803 133322827 -33327469 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 1602 1471 204 48 31 chrX 133322858 133323212 -33327084 + ORR1D1 LTR MaLR 1 360 -14 5 1602 23 0 0 0 chrX 133323217 133323240 -33327056 + AT_rich Low_complexity Low_complexity 1 23 0 5 1602 254 167 17 0 chrX 133323280 133323340 -33326956 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1602 609 259 59 15 chrX 133323361 133323565 -33326731 - B4A SINE B4 -77 215 3 5 1602 650 264 7 0 chrX 133323841 133323981 -33326315 + ID_B1 SINE B4 83 223 -1 5 1602 1182 238 67 32 chrX 133324022 133324498 -33325798 + RMER20B LTR ERVK 1 512 -4 5 1602 450 0 0 0 chrX 133324935 133324985 -33325311 + (TGG)n Simple_repeat Simple_repeat 1 50 0 5 1602 199 229 139 28 chrX 133325125 133325197 -33325099 + MIRb SINE MIR 20 99 -169 5 1602 612 200 67 0 chrX 133325257 133325392 -33324904 - B1F SINE Alu -1 148 5 5 1602 3772 129 28 0 chrX 133326560 133327134 -33323162 + Lx LINE L1 6058 6647 -7 5 1602 367 356 4 66 chrX 133327910 133328166 -33322130 - MLT1A LTR MaLR -122 252 13 5 1602 712 284 35 28 chrX 133328169 133328459 -33321837 + B4A SINE B4 1 292 0 5 1602 446 0 0 18 chrX 133329885 133329940 -33320356 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1602 404 323 113 22 chrX 133330165 133330387 -33319909 + MIRb SINE MIR 17 258 -10 5 1602 851 174 101 12 chrX 133331139 133331308 -33318988 + URR1A DNA MER1_type 3 186 -40 5 1602 413 310 97 29 chrX 133333410 133333862 -33316434 + L1M5 LINE L1 5293 5775 -387 5 1602 451 277 144 31 chrX 133334352 133334609 -33315687 - MLT1A1 LTR MaLR -3 405 120 5 1602 576 24 24 24 chrX 133334869 133334953 -33315343 + B1_Mus2 SINE Alu 64 147 0 5 1602 417 39 0 0 chrX 133335110 133335161 -33315135 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1602 216 86 0 0 chrX 133335164 133335199 -33315097 + (GA)n Simple_repeat Simple_repeat 1 35 0 5 1602 191 328 108 27 chrX 133336319 133336504 -33313792 - MIRb SINE MIR -29 239 40 5 1602 22 70 0 0 chrX 133338206 133338249 -33312047 + AT_rich Low_complexity Low_complexity 1 43 0 5 1602 180 279 49 0 chrX 133338266 133338327 -33311969 - MIR SINE MIR -79 183 120 5 1602 516 72 0 0 chrX 133339026 133339095 -33311201 + (TCCC)n Simple_repeat Simple_repeat 4 72 0 5 1602 279 0 0 0 chrX 133340011 133340042 -33310254 + (TC)n Simple_repeat Simple_repeat 2 32 0 5 1602 270 0 0 0 chrX 133340042 133340071 -33310225 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1602 272 308 39 0 chrX 133340087 133340165 -33310131 + ID4 SINE ID 2 82 -1 5 1602 2007 148 25 23 chrX 133341064 133341417 -33308879 - RMER1C Other Other -16 1326 973 5 1602 426 263 45 32 chrX 133341449 133341606 -33308690 - MTD LTR MaLR -260 159 1 5 1602 929 177 192 6 chrX 133341897 133342079 -33308217 - B3 SINE B2 0 216 1 5 1602 618 188 78 8 chrX 133342092 133342221 -33308075 - B1_Mur2 SINE Alu -6 143 6 5 1602 902 248 27 27 chrX 133342251 133342471 -33307825 + Lx8 LINE L1 7113 7332 -141 5 1602 21 0 0 0 chrX 133342578 133342599 -33307697 + AT_rich Low_complexity Low_complexity 1 21 0 5 1602 360 0 0 0 chrX 133344165 133344205 -33306091 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1602 1129 49 21 0 chrX 133344260 133344404 -33305892 - B1_Mus1 SINE Alu 0 148 2 5 1602 346 277 186 0 chrX 133344455 133344632 -33305664 - L1MA4 LINE L1 -368 5932 5723 5 1602 613 301 5 25 chrX 133344726 133344927 -33305369 - B3A SINE B2 0 198 2 5 1602 331 265 162 7 chrX 133345230 133345378 -33304918 - MER90a LTR ERV1 -60 554 384 5 1602 1153 253 18 7 chrX 133345423 133345698 -33304598 - B4A SINE B4 -13 279 2 5 1602 431 261 0 0 chrX 133345703 133345791 -33304505 - B4A SINE B4 -73 219 132 5 1602 638 274 102 5 chrX 133345867 133346108 -33304188 - MER90a LTR ERV1 -310 304 1 5 1602 626 217 26 83 chrX 133346785 133346941 -33303355 + B1_Mur1 SINE Alu 3 149 0 5 1602 455 230 55 8 chrX 133347973 133348100 -33302196 - ORR1D2 LTR MaLR 0 370 238 5 1602 207 0 0 0 chrX 133349786 133349809 -33300487 + (TAA)n Simple_repeat Simple_repeat 2 24 0 5 1602 316 289 10 40 chrX 133349884 133349985 -33300311 + LTR85b LTR Gypsy? 666 763 -21 5 1602 469 250 87 43 chrX 133350511 133350695 -33299601 + MER53 DNA hAT 1 192 -1 5 1602 753 150 19 64 chrX 133351312 133351469 -33298827 + B1_Mur4 SINE Alu 1 150 0 5 1602 201 278 14 14 chrX 133351786 133351859 -33298437 - L3b LINE CR1 -207 275 203 5 1602 233 269 63 21 chrX 133353303 133353398 -33296898 - L1MC5 LINE L1 -53 7908 7810 5 1602 213 185 36 18 chrX 133357202 133357257 -33293039 + GA-rich Low_complexity Low_complexity 3 58 0 5 1602 276 353 94 13 chrX 133358481 133358705 -33291591 + MIRc SINE MIR 3 244 -24 5 1602 252 303 100 10 chrX 133359286 133359386 -33290910 + PB1D9 SINE Alu 7 115 -5 5 1602 219 322 46 0 chrX 133359402 133359489 -33290807 - L3 LINE CR1 -62 4427 4337 5 1602 372 43 0 0 chrX 133360202 133360248 -33290048 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 5 1602 495 199 14 21 chrX 133360259 133360403 -33289893 + GA-rich Low_complexity Low_complexity 3 145 0 5 1602 1020 122 0 0 chrX 133360407 133360571 -33289725 + (GA)n Simple_repeat Simple_repeat 1 164 0 5 1602 207 100 0 0 chrX 133361070 133361100 -33289196 + (TGG)n Simple_repeat Simple_repeat 2 31 0 5 1602 213 207 35 0 chrX 133364241 133364328 -33285968 + (TA)n Simple_repeat Simple_repeat 2 91 0 5 1602 1291 58 11 0 chrX 133368178 133368440 -33281856 + (TCC)n Simple_repeat Simple_repeat 1 265 0 5 1602 375 23 0 0 chrX 133369214 133369258 -33281038 + (GAAAA)n Simple_repeat Simple_repeat 1 44 0 5 1602 28 0 0 0 chrX 133370422 133370450 -33279846 + AT_rich Low_complexity Low_complexity 1 28 0 5 1602 1442 28 11 0 chrX 133372202 133372380 -33277916 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 1602 258 105 0 0 chrX 133372688 133372726 -33277570 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1602 24 32 0 0 chrX 133372827 133372858 -33277438 + AT_rich Low_complexity Low_complexity 1 31 0 5 1602 762 211 0 0 chrX 133373151 133373298 -33276998 - B1_Mur2 SINE Alu 0 149 3 5 1602 332 268 56 118 chrX 133375426 133375587 -33274709 + RSINE1 SINE B4 15 165 0 5 1602 450 79 0 0 chrX 133375668 133375731 -33274565 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 1602 733 222 83 29 chrX 133376126 133376330 -33273966 - ORR1D2 LTR MaLR -131 239 25 5 1602 1094 97 14 0 chrX 133376592 133376737 -33273559 + B1_Mus2 SINE Alu 1 147 0 5 1602 413 102 111 22 chrX 133376737 133376827 -33273469 + L1Md_F2 LINE L1 6477 6574 -8 5 1602 863 202 144 26 chrX 133377546 133377775 -33272521 - RMER1C Other Other -17 1325 1070 5 1602 783 308 51 54 chrX 133377789 133378104 -33272192 - RMER1B Other Other -659 683 163 5 1602 309 277 10 29 chrX 133378299 133378403 -33271893 - RMER1B Other Other -913 153 52 5 1602 198 0 0 0 chrX 133378455 133378477 -33271819 + (ATTG)n Simple_repeat Simple_repeat 3 24 0 5 1602 1345 80 0 11 chrX 133378483 133378661 -33271635 - B2_Mm2 SINE B2 -18 177 2 5 1602 601 146 8 24 chrX 133378723 133378849 -33271447 - Lx6 LINE L1 -4 7456 7333 5 1602 496 35 0 0 chrX 133378849 133378906 -33271390 + L1Md_F2 LINE L1 5530 5586 -297 5 1602 7938 63 0 6 chrX 133378907 133379906 -33270390 + L1Md_F2 LINE L1 5588 6580 -2 5 1602 787 209 75 71 chrX 133379906 133380132 -33270164 - Lx6 LINE L1 -145 7315 7089 5 1602 227 318 38 31 chrX 133380126 133380285 -33270011 - L1M3 LINE L1 -1830 4310 4151 5 1602 1385 206 58 4 chrX 133380301 133380694 -33269602 - MT2A LTR ERVL -70 463 1 5 1602 533 269 28 7 chrX 133381309 133381451 -33268845 + B1F SINE Alu 1 145 -4 5 1602 227 264 57 0 chrX 133381756 133381809 -33268487 - ID4_ SINE ID -20 63 8 5 1602 877 246 9 14 chrX 133382353 133382576 -33267720 + ID_B1 SINE B4 2 223 -1 5 1602 22 56 0 0 chrX 133382786 133382822 -33267474 + AT_rich Low_complexity Low_complexity 1 36 0 5 1602 279 0 0 0 chrX 133383046 133383077 -33267219 + (CATA)n Simple_repeat Simple_repeat 1 31 0 5 1602 240 179 143 0 chrX 133383766 133383822 -33266474 + RMER21A LTR ERV1 401 464 -483 5 1602 357 24 0 0 chrX 133384079 133384121 -33266175 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 5 1602 1398 77 0 15 chrX 133384133 133384331 -33265965 + B2_Mm2 SINE B2 1 195 0 5 1602 403 320 0 0 chrX 133384331 133384428 -33265868 - PB1D10 SINE Alu -20 97 1 5 1602 238 115 16 16 chrX 133384833 133384895 -33265401 + (TTTTG)n Simple_repeat Simple_repeat 4 65 0 5 1602 492 18 0 0 chrX 133385683 133385740 -33264556 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 5 1602 25 0 0 0 chrX 133385904 133385929 -33264367 + AT_rich Low_complexity Low_complexity 1 25 0 5 1602 409 307 35 21 chrX 133387125 133387268 -33263028 - B3A SINE B2 -18 180 36 5 1602 1244 85 55 5 chrX 133387296 133387498 -33262798 - L1_Mus3 LINE L1 -6 6632 6421 5 1602 452 38 127 0 chrX 133387521 133387600 -33262696 + RLTR47_MM LTR ERV1 1 89 -443 5 1602 825 80 0 8 chrX 133387729 133387855 -33262441 + L1_Mus2 LINE L1 6440 6564 -2 5 1602 1765 274 62 72 chrX 133387897 133389326 -33260970 + MuRRS4-int LTR ERV1 2929 5547 -2009 5 1602 250 273 79 47 chrX 133389434 133389561 -33260735 + MuRRS4-int LTR ERV1 5639 5769 -1787 5 1602 383 342 42 19 chrX 133389825 133390090 -33260206 + MuRRS4-int LTR ERV1 4663 4933 -130 5 1602 2917 99 120 0 chrX 133390187 133390662 -33259634 + RLTR47_MM LTR ERV1 1 532 0 5 1602 25 0 0 0 chrX 133390696 133390721 -33259575 + AT_rich Low_complexity Low_complexity 1 25 0 6 1602 892 211 215 45 chrX 133390898 133391210 -33259086 + MLT1A0 LTR MaLR 1 365 0 6 1602 254 297 31 0 chrX 133391678 133391742 -33258554 - ID4_ SINE ID 0 83 18 6 1602 378 222 0 0 chrX 133391992 133392055 -33258241 + RSINE1 SINE B4 3 65 -100 6 1602 399 41 0 0 chrX 133392088 133392137 -33258159 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1602 252 0 0 0 chrX 133392137 133392164 -33258132 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 6 1602 26 30 0 0 chrX 133392348 133392381 -33257915 + AT_rich Low_complexity Low_complexity 1 33 0 6 1602 180 0 0 0 chrX 133392456 133392476 -33257820 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 6 1602 22 35 0 0 chrX 133392927 133392956 -33257340 + AT_rich Low_complexity Low_complexity 1 29 0 6 1602 336 311 217 0 chrX 133394239 133394400 -33255896 - L3 LINE CR1 -26 4463 4268 6 1602 359 155 0 17 chrX 133395303 133395362 -33254934 - HAL1-3A_ME LINE L1 -825 2033 1976 6 1602 372 94 0 0 chrX 133395451 133395504 -33254792 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1602 498 288 0 36 chrX 133397957 133398094 -33252202 - ID_B1 SINE B4 -2 222 91 6 1602 211 316 26 0 chrX 133398557 133398633 -33251663 - ID4 SINE ID 0 83 6 6 1602 434 297 17 110 chrX 133399129 133399428 -33250868 + CYRA11_Mm Unknown Y-chromosome 114 384 -233 6 1602 1211 169 9 44 chrX 133399200 133399429 -33250867 - URR1A DNA MER1_type -4 222 2 6 1602 316 342 0 73 chrX 133399579 133399702 -33250594 - PB1 SINE Alu -7 120 7 6 1602 21 0 0 0 chrX 133400032 133400053 -33250243 + AT_rich Low_complexity Low_complexity 1 21 0 6 1602 570 326 78 21 chrX 133400058 133400249 -33250047 + ID_B1 SINE B4 7 208 -16 6 1602 358 227 75 34 chrX 133400433 133400579 -33249717 + L1MA5 LINE L1 6143 6294 -6 6 1602 22 0 0 0 chrX 133400985 133401007 -33249289 + AT_rich Low_complexity Low_complexity 1 22 0 6 1602 659 46 0 11 chrX 133401329 133401417 -33248879 + (TTTTC)n Simple_repeat Simple_repeat 4 90 0 6 1602 343 221 88 0 chrX 133401423 133401491 -33248805 - ID4 SINE ID -8 75 2 6 1602 26 50 0 0 chrX 133403134 133403174 -33247122 + GC_rich Low_complexity Low_complexity 1 40 0 6 1602 1179 117 0 0 chrX 133403478 133403658 -33246638 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 6 1602 223 225 0 0 chrX 133404035 133404075 -33246221 + (CG)n Simple_repeat Simple_repeat 1 40 0 6 1602 441 0 0 0 chrX 133404075 133404124 -33246172 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1602 390 355 34 105 chrX 133404844 133405253 -33245043 + MLT1A1 LTR MaLR 26 405 -3 6 1602 33 90 0 0 chrX 133405273 133405362 -33244934 + AT_rich Low_complexity Low_complexity 1 89 0 6 1602 272 236 14 0 chrX 133405775 133405847 -33244449 + L1M4 LINE L1 5035 5107 -1039 6 1602 836 308 18 25 chrX 133406208 133406488 -33243808 + B4A SINE B4 1 278 -14 6 1602 585 105 0 0 chrX 133406544 133406630 -33243666 + (TAA)n Simple_repeat Simple_repeat 2 87 0 6 1602 692 230 7 28 chrX 133406639 133406782 -33243514 + B1_Mur1 SINE Alu 2 141 -8 6 1602 305 312 35 6 chrX 133406803 133406974 -33243322 + L1M4 LINE L1 5304 5479 -710 6 1602 621 202 18 0 chrX 133406984 133407098 -33243198 + B3 SINE B2 1 116 -100 6 1602 667 283 81 11 chrX 133407113 133407485 -33242811 + L1MB8 LINE L1 5773 6170 -8 6 1602 437 238 75 68 chrX 133407696 133407948 -33242348 + L1MC5 LINE L1 7560 7813 -148 6 1602 193 241 60 60 chrX 133408623 133408707 -33241589 - L3 LINE CR1 -188 4301 4218 6 1602 476 256 188 37 chrX 133408916 133409294 -33241002 - L1MA5 LINE L1 -460 5840 5406 6 1602 440 293 9 0 chrX 133409822 133409938 -33240358 + PB1D9 SINE Alu 3 119 -1 6 1602 1497 105 31 0 chrX 133409961 133410189 -33240107 + L1Md_F2 LINE L1 6348 6582 0 6 1602 219 368 61 27 chrX 133410451 133410599 -33239697 - L3 LINE CR1 -265 4224 4072 6 1602 232 297 66 25 chrX 133412002 133412123 -33238173 + MIRc SINE MIR 84 209 -59 6 1602 2036 278 52 15 chrX 133412155 133412764 -33237532 + Lx8 LINE L1 6360 6991 -482 6 1602 2144 246 83 12 chrX 133412851 133413201 -33237095 + Lx7 LINE L1 6557 6909 -787 6 1602 1116 82 0 0 chrX 133413201 133413348 -33236948 - B1_Mus2 SINE Alu 0 147 1 6 1602 2144 246 83 12 chrX 133413348 133413578 -33236718 + Lx7 LINE L1 6910 7178 -518 6 1602 22 0 0 0 chrX 133413613 133413635 -33236661 + AT_rich Low_complexity Low_complexity 1 22 0 6 1602 241 182 66 33 chrX 133413746 133413837 -33236459 + Lx7 LINE L1 7603 7696 0 6 1602 706 257 15 0 chrX 133414088 133414224 -33236072 + RSINE1 SINE B4 14 151 -14 6 1602 219 36 0 0 chrX 133414224 133414252 -33236044 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1602 890 95 0 42 chrX 133414662 133414827 -33235469 + (TTTTC)n Simple_repeat Simple_repeat 2 159 0 6 1602 1051 111 0 0 chrX 133414829 133414973 -33235323 - B1_Mus1 SINE Alu -3 145 2 6 1602 314 287 79 48 chrX 133415155 133415320 -33234976 + L1M4 LINE L1 3893 4062 -2084 6 1602 334 400 6 31 chrX 133415365 133415525 -33234771 - ID_B1 SINE B4 -67 157 2 6 1602 395 231 187 65 chrX 133415592 133415731 -33234565 + B4A SINE B4 137 292 0 6 1602 359 125 0 35 chrX 133415830 133415888 -33234408 + HAL1-3A_ME LINE L1 1976 2031 -827 6 1602 212 386 47 6 chrX 133415902 133416074 -33234222 + L2 LINE L2 1320 1498 -1921 6 1602 1182 68 0 0 chrX 133416119 133416266 -33234030 - B1_Mm SINE Alu 0 147 1 6 1602 211 344 109 53 chrX 133416302 133416640 -33233656 + L2 LINE L2 1546 1902 -1517 6 1602 7155 65 17 0 chrX 133416643 133417764 -33232532 + L1_Mus1 LINE L1 5479 6567 0 6 1602 605 268 21 47 chrX 133417989 133418181 -33232115 - MLT1A LTR MaLR -12 362 176 6 1602 345 293 32 24 chrX 133418347 133418473 -33231823 - MLT1A LTR MaLR -216 174 48 6 1602 225 0 0 0 chrX 133418961 133418986 -33231310 + (TA)n Simple_repeat Simple_repeat 2 26 0 6 1602 229 339 79 59 chrX 133419228 133419532 -33230764 + L2 LINE L2 2212 2521 -898 6 1602 477 0 0 0 chrX 133419799 133419852 -33230444 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1602 3621 108 0 23 chrX 133419889 133420008 -33230288 + L1_Mus3 LINE L1 5338 5456 -427 6 1602 1127 75 0 0 chrX 133420008 133420145 -33230151 + B1_Mus1 SINE Alu 2 138 -10 6 1602 227 31 31 0 chrX 133420145 133420177 -33230119 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 6 1602 7624 63 14 12 chrX 133420185 133421368 -33228928 + L1_Mus3 LINE L1 5457 6632 -6 6 1602 5667 69 11 1 chrX 133421974 133422702 -33227594 - Lx3_Mus LINE L1 0 7009 6275 6 1602 1053 127 35 6 chrX 133422755 133422929 -33227367 - B2_Mm1t SINE B2 -14 179 1 6 1602 191 88 29 0 chrX 133423098 133423132 -33227164 + (CAA)n Simple_repeat Simple_repeat 2 36 0 6 1602 213 211 0 0 chrX 133424063 133424120 -33226176 + (TA)n Simple_repeat Simple_repeat 1 57 0 6 1602 27 0 0 0 chrX 133424282 133424309 -33225987 + AT_rich Low_complexity Low_complexity 1 27 0 6 1602 23 0 0 0 chrX 133426067 133426090 -33224206 + AT_rich Low_complexity Low_complexity 1 23 0 6 1602 222 37 0 0 chrX 133426506 133426533 -33223763 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1602 2532 79 5 0 chrX 133427236 133427640 -33222656 - Lx LINE L1 -710 5926 5511 6 1602 4301 129 9 1 chrX 133427640 133428323 -33221973 + Lx LINE L1 5935 6622 -32 6 1602 752 194 7 0 chrX 133428386 133428525 -33221771 + B1_Mus1 SINE Alu 1 140 -8 6 1602 1673 184 3 10 chrX 133428738 133429034 -33221262 - MTC LTR MaLR -20 401 108 6 1602 649 154 0 35 chrX 133429036 133429150 -33221146 + B1_Mur4 SINE Alu 3 112 -38 6 1602 779 308 85 94 chrX 133429655 133429995 -33220301 - MTEa LTR MaLR -42 337 1 6 1602 393 294 73 0 chrX 133430076 133430185 -33220111 - PB1 SINE Alu -8 119 3 6 1602 257 381 20 50 chrX 133430212 133430411 -33219885 + MER102a DNA MER1_type 91 283 -47 6 1602 809 212 0 21 chrX 133430754 133430894 -33219402 + B1_Mur2 SINE Alu 1 137 -12 6 1602 619 259 52 13 chrX 133430924 133431155 -33219141 + L1M4 LINE L1 5047 5286 -860 6 200 733 275 13 0 chrX 133431191 133431340 -33218956 + RSINE1 SINE B4 15 165 0 6 1603 366 184 0 0 chrX 133431340 133431416 -33218880 + (CA)n Simple_repeat Simple_repeat 1 76 0 6 1603 514 254 46 23 chrX 133431432 133431677 -33218619 + L1M4 LINE L1 5270 5524 -650 6 1603 234 155 0 49 chrX 133431814 133431875 -33218421 + (CAGAGA)n Simple_repeat Simple_repeat 3 60 0 6 1603 526 265 8 0 chrX 133432101 133432218 -33218078 + B1F SINE Alu 27 144 -5 6 1603 10663 59 0 0 chrX 133432224 133433654 -33216642 - L1_Mm LINE L1 -1024 4859 3430 6 1603 3701 33 0 0 chrX 133433657 133434115 -33216181 + L1Md_F2 LINE L1 5129 5586 -297 6 1603 7997 48 8 2 chrX 133434115 133435104 -33215192 + L1Md_F2 LINE L1 5587 6581 -1 6 1603 309 218 184 0 chrX 133435378 133435465 -33214831 - PB1D9 SINE Alu -5 115 13 6 1603 1451 343 44 25 chrX 133437189 133438078 -33212218 + HERVL40-int LTR ERVL 310 1215 -4315 6 1603 803 114 9 9 chrX 133438173 133438288 -33212008 - B1_Mur4 SINE Alu -11 139 25 6 1603 196 148 0 32 chrX 133439334 133439397 -33210899 + (TTG)n Simple_repeat Simple_repeat 2 62 0 6 1603 320 0 25 0 chrX 133440422 133440462 -33209834 + (CAA)n Simple_repeat Simple_repeat 2 42 0 6 1603 185 292 154 36 chrX 133440529 133440639 -33209657 - L3 LINE CR1 -3541 948 826 6 1603 369 0 0 0 chrX 133441187 133441228 -33209068 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 6 1603 372 328 27 33 chrX 133442254 133442437 -33207859 + MuLV-int LTR ERV1 2977 3158 -4448 6 1603 275 371 8 12 chrX 133442860 133443116 -33207180 + MuLV-int LTR ERV1 3509 3763 -3689 6 1603 270 322 18 49 chrX 133443417 133443460 -33206836 + RLTR14-int LTR ERV1 2484 2523 -2794 6 1603 461 53 0 78 chrX 133443460 133443562 -33206734 + (TCTCTG)n Simple_repeat Simple_repeat 3 96 0 6 1603 344 313 22 49 chrX 133443562 133443743 -33206553 + RLTR14-int LTR ERV1 2524 2701 -2616 6 1603 2894 86 30 0 chrX 133443921 133444327 -33205969 + L1Md_F2 LINE L1 5045 5462 -421 6 1603 29527 48 3 2 chrX 133444323 133448640 -33201656 + L1Md_F2 LINE L1 2232 6557 -25 6 1603 198 0 0 0 chrX 133448643 133448665 -33201631 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 6 1603 7008 70 0 0 chrX 133448666 133449543 -33200753 + L1_Mm LINE L1 4781 5657 -226 6 1603 3510 23 0 0 chrX 133449539 133449935 -33200361 - L1Md_A LINE L1 -173 6409 6014 6 1603 1652 0 0 0 chrX 133449935 133450113 -33200183 + L1Md_A LINE L1 6405 6582 0 6 1603 7854 56 8 0 chrX 133450109 133451031 -33199265 + L1Md_F2 LINE L1 5642 6570 -12 6 1603 6400 128 35 13 chrX 133451036 133451199 -33199097 + L1_Mus1 LINE L1 5445 5607 -276 7 1603 3680 18 5 0 chrX 133451199 133451593 -33198703 - MTA_Mm LTR MaLR 0 396 1 7 1603 6400 81 19 9 chrX 133451593 133452419 -33197877 + L1_Mus1 LINE L1 5608 6442 -125 7 1603 188 135 27 0 chrX 133452504 133452541 -33197755 + CT-rich Low_complexity Low_complexity 2 39 0 7 1603 523 294 42 42 chrX 133452829 133453111 -33197185 - RLTR18B LTR ERVK -111 401 140 7 1603 197 128 21 0 chrX 133453493 133453540 -33196756 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 7 1603 6195 35 0 0 chrX 133453548 133454234 -33196062 - L1Md_T LINE L1 0 6582 5897 7 1603 2379 32 7 0 chrX 133454234 133454515 -33195781 + L1Md_T LINE L1 5610 5892 -690 7 1603 306 281 22 33 chrX 133455280 133455372 -33194924 + ID_B1 SINE B4 2 92 -132 7 1603 260 369 80 18 chrX 133455729 133455892 -33194404 + LTR16A LTR ERVL 33 205 -246 7 1603 459 215 0 0 chrX 133456117 133456238 -33194058 + (TA)n Simple_repeat Simple_repeat 2 122 0 7 1603 25 0 0 0 chrX 133456253 133456278 -33194018 + AT_rich Low_complexity Low_complexity 1 25 0 7 1603 247 200 31 0 chrX 133456291 133456488 -33193808 + (TA)n Simple_repeat Simple_repeat 1 203 0 7 1603 23 0 0 0 chrX 133456508 133456531 -33193765 + AT_rich Low_complexity Low_complexity 1 23 0 7 1603 181 83 56 0 chrX 133456534 133456570 -33193726 + (TA)n Simple_repeat Simple_repeat 2 39 0 7 1603 267 267 48 0 chrX 133456590 133456755 -33193541 + (TA)n Simple_repeat Simple_repeat 1 173 0 7 1603 304 109 43 43 chrX 133456756 133456871 -33193425 + (TTATA)n Simple_repeat Simple_repeat 4 118 0 7 1603 4509 102 50 7 chrX 133456880 133457499 -33192797 - Lx4A LINE L1 -1 7057 6412 7 1603 231 178 66 25 chrX 133457509 133457630 -33192666 + (TTATA)n Simple_repeat Simple_repeat 4 129 0 7 1603 5405 106 44 31 chrX 133457699 133458499 -33191797 - Lx2 LINE L1 0 6997 6188 7 1603 3459 108 10 6 chrX 133458499 133458995 -33191301 + Lx2 LINE L1 5595 6092 -905 7 1603 22 80 0 0 chrX 133459035 133459085 -33191211 + AT_rich Low_complexity Low_complexity 1 50 0 7 1603 298 136 45 15 chrX 133459095 133459229 -33191067 + (TA)n Simple_repeat Simple_repeat 2 139 0 7 1603 495 0 0 0 chrX 133459247 133459302 -33190994 + (TAA)n Simple_repeat Simple_repeat 3 57 0 7 1603 305 151 65 12 chrX 133459352 133459520 -33190776 + (TA)n Simple_repeat Simple_repeat 1 177 0 7 1603 35 83 0 0 chrX 133459531 133459615 -33190681 + AT_rich Low_complexity Low_complexity 1 84 0 7 1603 473 113 50 12 chrX 133459627 133459788 -33190508 + (TA)n Simple_repeat Simple_repeat 1 167 0 7 1603 204 149 70 14 chrX 133459848 133459991 -33190305 + (TA)n Simple_repeat Simple_repeat 1 151 0 7 1603 354 170 65 29 chrX 133460011 133460181 -33190115 + (TATAA)n Simple_repeat Simple_repeat 5 180 0 7 1603 364 202 48 12 chrX 133460108 133460273 -33190023 + (TA)n Simple_repeat Simple_repeat 1 171 0 7 1603 334 205 16 39 chrX 133460311 133460438 -33189858 + (TTATA)n Simple_repeat Simple_repeat 1 124 0 7 1603 1125 173 132 4 chrX 133460451 133460678 -33189618 - Lx4A LINE L1 0 7058 6803 7 1603 257 199 61 18 chrX 133460678 133460842 -33189454 + (TA)n Simple_repeat Simple_repeat 1 171 0 7 1603 239 275 0 68 chrX 133460859 133460898 -33189398 + Lx9 LINE L1 7476 7514 -130 7 1603 369 0 0 0 chrX 133460898 133460939 -33189357 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1603 239 275 0 68 chrX 133460939 133460966 -33189330 + Lx9 LINE L1 7515 7537 -107 7 1603 485 125 227 0 chrX 133460966 133461054 -33189242 + PB1D9 SINE Alu 2 109 -11 7 1603 495 48 0 0 chrX 133461054 133461116 -33189180 + (GAAA)n Simple_repeat Simple_repeat 2 63 0 7 1603 239 275 0 68 chrX 133461116 133461195 -33189101 + Lx9 LINE L1 7538 7612 -32 7 1603 28 0 0 0 chrX 133461413 133461441 -33188855 + AT_rich Low_complexity Low_complexity 1 28 0 7 1603 356 338 0 0 chrX 133462027 133462175 -33188121 + GA-rich Low_complexity Low_complexity 1 148 0 7 1603 789 230 0 22 chrX 133463021 133463199 -33187097 - Lx7 LINE L1 -30 7666 7493 7 1603 215 129 27 54 chrX 133463202 133463276 -33187020 + (TATAA)n Simple_repeat Simple_repeat 4 75 0 7 1603 1910 47 93 15 chrX 133463282 133463541 -33186755 - L1_Mus1 LINE L1 -393 6174 5896 7 1603 2799 80 3 8 chrX 133463542 133463906 -33186390 + L1_Mus1 LINE L1 6206 6567 0 7 1603 23 0 0 0 chrX 133464152 133464175 -33186121 + GC_rich Low_complexity Low_complexity 1 23 0 7 1603 276 215 172 0 chrX 133466033 133466126 -33184170 - Lx7 LINE L1 -216 7480 7372 7 1603 252 122 0 0 chrX 133466150 133466191 -33184105 + (TA)n Simple_repeat Simple_repeat 1 41 0 7 1603 204 185 60 24 chrX 133466191 133466274 -33184022 + (TTATA)n Simple_repeat Simple_repeat 3 88 0 7 1603 21 0 0 0 chrX 133466278 133466299 -33183997 + AT_rich Low_complexity Low_complexity 1 21 0 7 1603 3143 209 73 30 chrX 133466299 133467026 -33183270 - Lx7 LINE L1 -335 7361 6604 7 1603 1089 210 62 21 chrX 133467042 133467285 -33183011 - Lx5 LINE L1 0 7050 6798 7 1603 207 0 0 0 chrX 133467335 133467358 -33182938 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1603 1093 280 30 25 chrX 133467923 133468286 -33182010 + Lx8 LINE L1 7107 7471 -2 7 1603 7686 43 23 0 chrX 133468335 133469289 -33181007 - L1Md_F3 LINE L1 0 6584 5614 7 1603 7564 82 3 13 chrX 133469616 133471030 -33179266 - L1_Mus2 LINE L1 0 6566 5168 7 1603 314 347 17 8 chrX 133471040 133471159 -33179137 + LTR16A LTR ERVL 240 359 -92 7 1603 789 242 7 7 chrX 133471295 133471449 -33178847 - B3 SINE B2 -57 159 6 7 1603 4180 68 24 2 chrX 133471775 133472361 -33177935 - MusHAL1 LINE L1 -633 2079 1481 7 1603 244 333 152 22 chrX 133472958 133473096 -33177200 - MIRb SINE MIR -81 187 32 7 1603 1927 183 6 43 chrX 133473273 133473621 -33176675 + Lx5 LINE L1 6595 6929 -121 7 1603 5759 139 21 102 chrX 133473621 133474030 -33176266 - L1_Mur2 LINE L1 -162 5715 5320 7 1603 680 89 0 0 chrX 133474030 133474120 -33176176 + B1_Mus2 SINE Alu 44 133 -14 7 1603 548 29 14 0 chrX 133474121 133474191 -33176105 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 7 1603 5759 139 21 102 chrX 133474191 133474870 -33175426 - L1_Mur2 LINE L1 -559 5318 4632 7 1603 647 235 0 0 chrX 133474976 133475095 -33175201 - B1_Mur2 SINE Alu -28 121 3 7 1603 965 180 164 5 chrX 133475649 133475844 -33174452 - URR1A DNA MER1_type 0 226 1 7 1603 225 0 0 0 chrX 133476702 133476727 -33173569 + (CAA)n Simple_repeat Simple_repeat 2 26 0 7 1603 2501 130 52 52 chrX 133477224 133477645 -33172651 - MTC LTR MaLR 0 421 1 7 1603 791 152 32 0 chrX 133477645 133477803 -33172493 - MTC-int LTR MaLR 0 1258 1096 7 1603 1097 269 110 16 chrX 133477806 133478123 -33172173 + Lx5 LINE L1 6692 7038 -12 7 1603 5626 160 35 27 chrX 133478139 133479228 -33171068 - MTC-int LTR MaLR -159 1099 2 7 1603 2113 130 43 18 chrX 133479227 133479556 -33170740 - MTC LTR MaLR 0 421 85 7 1603 577 285 18 96 chrX 133480127 133480356 -33169940 + B3A SINE B2 1 211 -5 7 1603 789 127 36 0 chrX 133480799 133480965 -33169331 + CT-rich Low_complexity Low_complexity 2 173 0 7 1603 201 128 0 49 chrX 133480970 133481041 -33169255 + (TCTCTG)n Simple_repeat Simple_repeat 1 67 0 7 1603 267 140 0 0 chrX 133481041 133481091 -33169205 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 1603 1067 251 27 46 chrX 133481507 133481702 -33168594 + L1_Mur3 LINE L1 980 1174 -6554 7 1603 192 40 0 0 chrX 133481702 133481727 -33168569 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 1603 3780 174 52 70 chrX 133481727 133482893 -33167403 + L1_Mur3 LINE L1 1175 2269 -3611 7 1603 3035 241 35 35 chrX 133482883 133483570 -33166726 + Lx5 LINE L1 6360 7046 -4 7 1603 567 257 19 103 chrX 133483641 133483683 -33166613 - RSINE1 SINE B4 -21 144 113 7 1603 1815 195 21 31 chrX 133483683 133484069 -33166227 - Lx4B LINE L1 -2 7056 6675 7 1603 567 257 19 103 chrX 133484069 133484182 -33166114 - RSINE1 SINE B4 -53 112 2 7 1603 255 346 53 99 chrX 133484182 133484332 -33165964 - B4 SINE B4 -83 209 67 7 1603 25 0 0 0 chrX 133484955 133484980 -33165316 + AT_rich Low_complexity Low_complexity 1 25 0 7 1603 377 307 44 0 chrX 133484983 133485120 -33165176 + B1F SINE Alu 1 143 -6 7 1603 2750 82 8 60 chrX 133485253 133485654 -33164642 + L1_Mus3 LINE L1 6258 6637 -1 7 1603 3064 70 3 0 chrX 133485692 133486063 -33164233 + L1_Mus1 LINE L1 6196 6567 0 7 1603 2149 155 26 0 chrX 133486697 133487045 -33163251 - Lx2A1 LINE L1 0 7008 6652 7 1603 4412 117 21 20 chrX 133487045 133487744 -33162552 + Lx2A1 LINE L1 5819 6518 -490 7 1603 4692 122 37 4 chrX 133487860 133488562 -33161734 - L1_Mus3 LINE L1 -8 6630 5906 7 1603 912 122 21 7 chrX 133490059 133490199 -33160097 + B1_Mus1 SINE Alu 1 142 -6 7 1603 777 90 0 0 chrX 133490202 133490313 -33159983 + (CATATA)n Simple_repeat Simple_repeat 2 112 0 7 1603 217 116 0 44 chrX 133490966 133491011 -33159285 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 7 1603 312 120 0 0 chrX 133492926 133492976 -33157320 + (TTG)n Simple_repeat Simple_repeat 2 51 0 7 1603 250 261 14 14 chrX 133493221 133493291 -33157005 + Lx7 LINE L1 6948 7017 -679 7 1603 568 260 8 0 chrX 133493374 133493497 -33156799 + Lx8 LINE L1 7182 7305 -168 7 1603 1299 187 69 11 chrX 133493495 133493771 -33156525 - Lx5 LINE L1 -676 6374 6083 7 1603 294 169 220 0 chrX 133493989 133494048 -33156248 - ID4_ SINE ID -11 72 1 7 1603 586 346 58 11 chrX 133494197 133494574 -33155722 + L1M5 LINE L1 5270 5664 -576 7 1603 461 70 26 53 chrX 133495060 133495136 -33155160 + B1_Mm SINE Alu 71 144 -3 7 1603 1247 61 0 18 chrX 133495170 133495338 -33154958 + B2_Mm2 SINE B2 2 166 -29 7 1603 401 64 298 27 chrX 133495403 133495512 -33154784 + B2_Mm2 SINE B2 47 188 -7 7 1603 416 314 75 17 chrX 133495579 133495699 -33154597 - B3A SINE B2 -26 172 46 7 1603 271 295 11 11 chrX 133495857 133495946 -33154350 + (TG)n Simple_repeat Simple_repeat 1 89 0 7 1603 946 312 18 44 chrX 133495959 133496234 -33154062 - B4A SINE B4 -19 273 6 7 1603 213 39 0 0 chrX 133496254 133496280 -33154016 + (TTG)n Simple_repeat Simple_repeat 2 27 0 7 1603 361 328 0 0 chrX 133496547 133496669 -33153627 - MER20 DNA MER1_type 0 219 98 7 1603 685 298 30 40 chrX 133496717 133496880 -33153416 + ID_B1 SINE B4 7 172 -52 7 1603 3066 92 123 77 chrX 133496880 133497376 -33152920 - MURVY-LTR LTR ERV1 0 519 1 7 1603 685 298 30 40 chrX 133497376 133497411 -33152885 + ID_B1 SINE B4 173 203 -21 7 1603 289 343 39 0 chrX 133497533 133497635 -33152661 + PB1 SINE Alu 9 114 -13 7 1603 591 78 19 19 chrX 133497636 133497740 -33152556 + (GGGA)n Simple_repeat Simple_repeat 2 105 0 7 1603 3565 170 45 25 chrX 133497741 133498460 -33151836 - MTC-int LTR MaLR -524 734 2 7 1603 2157 133 43 9 chrX 133498459 133498785 -33151511 - MTC LTR MaLR 0 421 85 7 1603 2138 156 29 0 chrX 133499550 133499897 -33150399 - Lx2A1 LINE L1 0 7008 6652 7 1603 700 87 19 0 chrX 133499897 133500000 -33150296 + Lx2A LINE L1 5819 5923 -1085 7 1603 3596 131 22 24 chrX 133500000 133500596 -33149700 + Lx2A1 LINE L1 5924 6518 -490 1 1603 4632 116 34 3 chrX 133500712 133501415 -33148881 - L1_Mus3 LINE L1 -8 6630 5906 2 1603 33642 75 2 15 chrX 133501785 133506967 -33143329 + L1Md_F2 LINE L1 478 5586 -297 3 1603 8158 51 2 1 chrX 133506967 133507950 -33142346 + L1Md_F2 LINE L1 5587 6570 -12 3 1603 909 133 14 7 chrX 133508817 133508961 -33141335 + B1_Mus1 SINE Alu 1 145 -3 4 1603 261 119 0 0 chrX 133508961 133509003 -33141293 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 1603 273 57 0 0 chrX 133511113 133511148 -33139148 + (CCA)n Simple_repeat Simple_repeat 1 35 0 6 1603 456 117 0 0 chrX 133511786 133511863 -33138433 + (TTG)n Simple_repeat Simple_repeat 2 78 0 7 1603 231 275 14 14 chrX 133512107 133512177 -33138119 + Lx7 LINE L1 6948 7017 -679 8 1603 704 324 5 23 chrX 133512195 133512416 -33137880 + Lx8 LINE L1 7089 7305 -168 9 1603 1305 201 69 11 chrX 133512414 133512690 -33137606 - Lx5 LINE L1 -676 6374 6083 1 1603 265 250 27 14 chrX 133512908 133512981 -33137315 - ID4_ SINE ID -4 79 6 1 1603 505 320 65 8 chrX 133513121 133513382 -33136914 + L1M5 LINE L1 5270 5545 -695 1 1603 729 183 34 27 chrX 133513484 133513630 -33136666 - B1_Mus1 SINE Alu -1 147 1 1 1603 364 176 0 0 chrX 133513630 133513698 -33136598 + B1_Mur4 SINE Alu 77 144 -6 1 1603 246 81 0 0 chrX 133513703 133513740 -33136556 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1603 214 231 0 0 chrX 133513740 133513779 -33136517 + (CG)n Simple_repeat Simple_repeat 1 39 0 1 1603 401 301 30 0 chrX 133514259 133514392 -33135904 - ID_B1 SINE B4 -10 214 78 1 1603 445 254 29 15 chrX 133514391 133514527 -33135769 - MER2 DNA MER2_type -122 223 86 1 1603 975 113 14 0 chrX 133514565 133514706 -33135590 + B1_Mus1 SINE Alu 1 143 -5 1 1603 330 115 0 0 chrX 133514711 133514763 -33135533 + (TAA)n Simple_repeat Simple_repeat 1 52 0 2 1603 4264 29 0 0 chrX 133514983 133515465 -33134831 - LTRIS_Mm LTR ERV1 0 482 1 2 1603 298 293 0 83 chrX 133515707 133515815 -33134481 + MamSINE1 SINE tRNA 191 289 -1 2 1603 263 204 140 20 chrX 133515853 133515953 -33134343 - L2c LINE L2 -1 3386 3275 2 1603 516 32 0 0 chrX 133516440 133516502 -33133794 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 1603 23 0 0 0 chrX 133516544 133516567 -33133729 + AT_rich Low_complexity Low_complexity 1 23 0 2 1603 1063 98 0 0 chrX 133518424 133518567 -33131729 + B1_Mus2 SINE Alu 3 145 -2 2 1603 1110 101 0 12 chrX 133518602 133518773 -33131523 + B2_Mm2 SINE B2 2 170 -25 2 1603 366 94 11 15 chrX 133518837 133518903 -33131393 + B2_Mm2 SINE B2 46 116 -82 2 1603 356 322 75 17 chrX 133519012 133519132 -33131164 - B3A SINE B2 -26 172 46 2 1603 275 192 13 0 chrX 133519290 133519368 -33130928 + (TG)n Simple_repeat Simple_repeat 1 79 0 3 1603 874 331 10 44 chrX 133519382 133519679 -33130617 - B4A SINE B4 0 292 6 3 1603 314 322 8 0 chrX 133519944 133520065 -33130231 - MER20 DNA MER1_type 0 219 98 3 1603 605 319 32 11 chrX 133520117 133520307 -33129989 + ID_B1 SINE B4 11 204 -20 3 1603 319 303 45 18 chrX 133520413 133520524 -33129772 + PB1 SINE Alu 1 114 -13 3 1603 673 101 34 0 chrX 133520525 133520644 -33129652 + (GGGA)n Simple_repeat Simple_repeat 2 124 0 3 1603 275 352 29 65 chrX 133521982 133522152 -33128144 + MIRb SINE MIR 37 200 -68 3 1603 935 310 29 41 chrX 133522802 133523266 -33127030 + L1MA4 LINE L1 5476 5932 -368 3 1603 195 42 0 0 chrX 133523266 133523290 -33127006 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3 1603 917 324 25 45 chrX 133523290 133523327 -33126969 + L1MA4 LINE L1 5933 5969 -331 3 1603 1116 174 42 0 chrX 133523699 133523912 -33126384 + URR1A DNA MER1_type 5 226 0 3 1603 297 0 0 0 chrX 133524148 133524181 -33126115 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 4 1603 192 300 121 11 chrX 133524264 133524355 -33125941 + MIRb SINE MIR 39 139 -129 4 1603 415 281 47 0 chrX 133524404 133524532 -33125764 - RSINE1 SINE B4 -31 134 1 4 1603 211 380 0 37 chrX 133524717 133524799 -33125497 - ID4_ SINE ID 0 83 5 4 1603 497 295 37 37 chrX 133524828 133525043 -33125253 + MIRb SINE MIR 9 223 -45 4 1603 226 292 93 9 chrX 133526150 133526257 -33124039 - Charlie4z DNA MER1_type -1 166 51 4 1603 182 270 124 18 chrX 133527237 133527350 -33122946 + MIRb SINE MIR 133 257 -11 4 1603 243 224 0 0 chrX 133528626 133528675 -33121621 + G-rich Low_complexity Low_complexity 1 49 0 4 1603 195 42 0 0 chrX 133529023 133529047 -33121249 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1603 406 349 55 76 chrX 133529317 133529841 -33120455 + MamGyp-int LTR Gypsy 605 1117 -3945 4 1603 413 250 189 22 chrX 133531297 133531477 -33118819 - B3 SINE B2 -3 213 4 4 1603 808 195 0 13 chrX 133533006 133533157 -33117139 + B1_Mur3 SINE Alu 1 149 0 5 1603 572 186 31 8 chrX 133534078 133534208 -33116088 - RMER5 LTR ERV1 -39 495 363 5 1603 383 248 89 0 chrX 133534333 133534434 -33115862 - RSINE1 SINE B4 -53 112 3 5 1603 289 260 0 0 chrX 133534823 133534896 -33115400 - L1MC5 LINE L1 -54 7907 7835 5 1603 561 200 0 0 chrX 133534940 133535040 -33115256 - B1_Mus2 SINE Alu -5 142 43 5 1603 394 253 47 2 chrX 133535994 133536105 -33114191 + B1F1 SINE Alu 7 121 -28 5 1603 1281 111 16 0 chrX 133536105 133536294 -33114002 - Lx4A LINE L1 -667 6391 6200 5 1603 5181 107 3 4 chrX 133536342 133537062 -33113234 + Lx4A LINE L1 6340 7058 0 5 1603 520 291 69 7 chrX 133537177 133537454 -33112842 + L1MD LINE L1 4573 4866 -1280 5 1603 715 306 34 0 chrX 133537461 133537670 -33112626 - MTEa LTR MaLR -163 216 1 5 1603 2558 294 54 19 chrX 133537670 133538536 -33111760 - MTEa-int LTR MaLR 0 1580 684 5 1603 616 201 135 80 chrX 133538530 133538730 -33111566 - MTEa-int LTR MaLR -1079 501 291 5 1603 876 261 151 22 chrX 133538890 133539264 -33111032 + L1M2 LINE L1 4571 4998 -1142 6 1603 349 275 147 32 chrX 133539524 133539776 -33110520 + L1M2 LINE L1 5077 5357 -786 6 1603 230 324 69 0 chrX 133539796 133539898 -33110398 + Lx8 LINE L1 7160 7268 -205 6 1603 632 261 39 0 chrX 133540344 133540474 -33109822 + RSINE1 SINE B4 2 136 -29 6 1603 858 154 0 45 chrX 133540565 133540721 -33109575 + B1_Mur4 SINE Alu 2 150 0 6 1603 1556 173 80 20 chrX 133540928 133541277 -33109019 + ORR1D1 LTR MaLR 1 370 -4 6 1603 252 0 0 0 chrX 133541321 133541349 -33108947 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1603 222 179 0 0 chrX 133541351 133541407 -33108889 + GA-rich Low_complexity Low_complexity 1 56 0 6 1603 1031 300 141 3 chrX 133541557 133541948 -33108348 + MER82 DNA MER2_type 208 652 -1 6 1603 336 252 107 0 chrX 133542006 133542109 -33108187 - B1F SINE Alu 0 149 36 6 1603 3519 28 2 0 chrX 133542290 133542685 -33107611 + MTA_Mm LTR MaLR 1 396 0 6 1603 1064 210 4 82 chrX 133543277 133543319 -33106977 + B3 SINE B2 1 33 -183 7 1603 1702 11 11 0 chrX 133543319 133543510 -33106786 + B2_Mm1a SINE B2 1 193 0 7 1603 1064 210 4 82 chrX 133543510 133543700 -33106596 + B3 SINE B2 34 215 -1 7 1603 322 292 141 68 chrX 133543822 133544013 -33106283 - MLT1H1 LTR MaLR -150 405 201 7 1603 674 283 44 142 chrX 133544166 133544470 -33105826 - Lx9 LINE L1 -267 7377 7081 7 1603 1075 89 7 0 chrX 133544470 133544616 -33105680 + B1_Mus1 SINE Alu 2 148 0 7 1603 674 283 44 142 chrX 133544616 133544747 -33105549 - Lx9 LINE L1 -564 7080 6985 7 1603 192 97 0 0 chrX 133544754 133544785 -33105511 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 7 1603 655 204 15 29 chrX 133544807 133544943 -33105353 - B1_Mur1 SINE Alu -15 134 1 7 1603 209 346 150 10 chrX 133545406 133545613 -33104683 + L2 LINE L2 2257 2492 -927 7 1603 2187 129 127 16 chrX 133546129 133546508 -33103788 - MTC LTR MaLR 0 421 1 7 1603 666 332 55 69 chrX 133546625 133547382 -33102914 + L1MEb LINE L1 56 802 -5268 7 1603 297 222 55 14 chrX 133547644 133547717 -33102579 - MLT1K LTR MaLR -4 591 516 8 1603 456 19 0 0 chrX 133547905 133547958 -33102338 + (GA)n Simple_repeat Simple_repeat 2 54 0 8 1603 376 176 41 191 chrX 133548186 133548333 -33101963 + RSINE1 SINE B4 4 128 -37 8 1603 1376 105 16 0 chrX 133548618 133548809 -33101487 + B2_Mm2 SINE B2 2 195 0 8 1603 353 310 50 9 chrX 133548909 133549053 -33101243 + B1F SINE Alu 1 149 0 8 1603 21 0 0 0 chrX 133551122 133551143 -33099153 + AT_rich Low_complexity Low_complexity 1 21 0 8 1603 253 295 105 0 chrX 133551152 133551247 -33099049 + PB1D10 SINE Alu 1 105 -12 8 1603 267 31 0 0 chrX 133551249 133551281 -33099015 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 1603 306 0 0 0 chrX 133551647 133551681 -33098615 + (GA)n Simple_repeat Simple_repeat 2 35 0 8 1603 309 298 0 28 chrX 133551946 133552057 -33098239 + ID4_ SINE ID 2 105 -47 8 1603 318 209 0 133 chrX 133553130 133553235 -33097061 + MT2B LTR ERVL 150 240 -361 9 1603 853 127 0 0 chrX 133553156 133553290 -33097006 + B1_Mus1 SINE Alu 6 139 -9 9 1603 370 217 55 36 chrX 133553295 133553405 -33096891 + L1M2 LINE L1 5282 5393 -750 9 1603 1343 79 23 0 chrX 133554718 133554895 -33095401 + B2_Mm2 SINE B2 1 181 -14 9 1603 1197 48 0 0 chrX 133554932 133555079 -33095217 + B1_Mm SINE Alu 1 147 0 9 1603 189 0 0 0 chrX 133555079 133555100 -33095196 + (A)n Simple_repeat Simple_repeat 1 21 0 9 1603 345 250 111 22 chrX 133555138 133555273 -33095023 + B4A SINE B4 136 282 -10 9 1603 393 205 120 24 chrX 133555336 133555461 -33094835 - B4A SINE B4 -20 272 136 9 1603 1357 73 23 0 chrX 133555525 133555702 -33094594 - B2_Mm2 SINE B2 -14 181 1 9 1603 219 114 0 0 chrX 133556537 133556572 -33093724 + (T)n Simple_repeat Simple_repeat 1 35 0 9 1603 1045 65 0 0 chrX 133556576 133556714 -33093582 - B1_Mus1 SINE Alu 0 148 11 1 1603 60 15 0 0 chrX 133557970 133558037 -33092259 + AT_rich Low_complexity Low_complexity 1 67 0 1 1603 474 287 0 7 chrX 133558108 133558245 -33092051 + B1_Mur1 SINE Alu 5 140 -9 1 1603 325 298 40 117 chrX 133558289 133558505 -33091791 + L1MA7 LINE L1 5868 6074 -217 1 1603 703 243 63 5 chrX 133558505 133558695 -33091601 - B3 SINE B2 -15 201 1 1 1603 325 298 40 117 chrX 133558695 133558854 -33091442 + L1MA7 LINE L1 6075 6214 -77 1 1603 822 262 25 10 chrX 133559783 133559987 -33090309 + B3 SINE B2 1 207 -9 1 1603 631 250 8 0 chrX 133560318 133560442 -33089854 + ID_B1 SINE B4 93 217 -7 1 1603 216 122 73 0 chrX 133560407 133560448 -33089848 + PB1D7 SINE Alu 76 119 -1 1 1603 2411 159 28 16 chrX 133560527 133561025 -33089271 + L1_Mur3 LINE L1 4772 5275 -605 1 1603 204 40 0 0 chrX 133561438 133561463 -33088833 + (ACCG)n Simple_repeat Simple_repeat 2 26 0 1 200 984 100 88 6 chrX 133562275 133562446 -33087850 + URR1A DNA MER1_type 37 221 -5 1 1604 405 327 18 60 chrX 133562886 133563052 -33087244 + RSINE1 SINE B4 3 161 -4 1 1604 287 229 98 0 chrX 133564835 133564896 -33085400 - ID4 SINE ID -14 69 3 1 1604 673 301 46 32 chrX 133565200 133565485 -33084811 + B4A SINE B4 2 290 -2 1 1604 336 218 0 0 chrX 133565487 133565574 -33084722 + (CA)n Simple_repeat Simple_repeat 1 87 0 1 1604 307 229 221 33 chrX 133566046 133566168 -33084128 + B3 SINE B2 65 209 -7 1 1604 360 236 120 75 chrX 133566172 133566305 -33083991 + B4 SINE B4 108 246 -46 1 1604 896 232 56 24 chrX 133566365 133566617 -33083679 - RMER15 LTR ERVL -16 559 300 1 1604 505 282 116 44 chrX 133566902 133567291 -33083005 + L1MA7 LINE L1 5816 6232 -59 1 1604 830 221 16 25 chrX 133567801 133567998 -33082298 + B3A SINE B2 17 215 -1 1 1604 387 0 0 0 chrX 133568037 133568080 -33082216 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1604 231 232 0 35 chrX 133569552 133569610 -33080686 - PB1D9 SINE Alu -2 118 63 1 1604 311 274 126 24 chrX 133569695 133569949 -33080347 + L1M2 LINE L1 5062 5341 -802 1 1604 1164 196 94 108 chrX 133569952 133570324 -33079972 + RLTR14 LTR ERV1 3 369 -13 1 1604 308 254 2 5 chrX 133570403 133570420 -33079876 - B1F2 SINE Alu -228 86 36 1 1604 285 270 32 0 chrX 133570420 133570483 -33079813 - ID_B1 SINE B4 -69 155 91 1 1604 576 299 133 10 chrX 133570514 133570710 -33079586 + B4 SINE B4 4 223 -69 1 1604 605 202 9 17 chrX 133570744 133570860 -33079436 + PB1D9 SINE Alu 5 119 -1 1 1604 227 288 25 119 chrX 133571559 133571677 -33078619 + MER5A DNA MER1_type 47 153 -36 1 1604 189 0 0 0 chrX 133572102 133572123 -33078173 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 1 1604 834 71 0 0 chrX 133573206 133573318 -33076978 - B1_Mus1 SINE Alu -2 146 35 1 1604 362 294 94 20 chrX 133573435 133573584 -33076712 - RSINE1 SINE B4 -4 161 2 1 1604 189 250 16 48 chrX 133573669 133573732 -33076564 + MIR SINE MIR 123 183 -79 1 1604 23 0 0 0 chrX 133573772 133573795 -33076501 + AT_rich Low_complexity Low_complexity 1 23 0 1 1604 936 219 30 0 chrX 133573806 133574007 -33076289 - B3 SINE B2 -9 207 1 1 1604 225 218 67 133 chrX 133574108 133574121 -33076175 - B4 SINE B4 -203 89 6 1 1604 492 143 13 0 chrX 133574121 133574198 -33076098 - B3A SINE B2 -115 83 6 1 1604 579 129 17 25 chrX 133574220 133574339 -33075957 - B1_Mur4 SINE Alu 0 150 33 1 1604 907 102 68 11 chrX 133574263 133574437 -33075859 + ORR1A2 LTR MaLR 129 305 -22 1 1604 2701 100 18 0 chrX 133574432 133574823 -33075473 + ORR1A2-int LTR MaLR 12 409 -1554 1 1604 241 56 0 27 chrX 133574808 133574845 -33075451 + ORR1A2-int LTR MaLR 1928 1963 0 1 1604 2330 98 6 12 chrX 133574845 133575174 -33075122 + ORR1A2 LTR MaLR 1 327 0 1 1604 936 109 29 0 chrX 133575366 133575503 -33074793 + B1_Mus1 SINE Alu 1 141 -7 1 1604 189 0 0 0 chrX 133575504 133575525 -33074771 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 1604 411 183 24 35 chrX 133575562 133575647 -33074649 + B4A SINE B4 3 86 -206 1 1604 222 37 0 0 chrX 133576208 133576235 -33074061 + (CAAAA)n Simple_repeat Simple_repeat 1 27 0 1 1604 315 71 0 0 chrX 133576269 133576311 -33073985 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1604 230 296 35 69 chrX 133576322 133576409 -33073887 + PB1D10 SINE Alu 14 97 -20 1 1604 23 33 0 0 chrX 133576700 133576730 -33073566 + AT_rich Low_complexity Low_complexity 1 30 0 1 1604 2114 91 101 0 chrX 133576782 133577079 -33073217 - ORR1A2 LTR MaLR 0 327 1 1 1604 9796 133 58 4 chrX 133577079 133578780 -33071516 - ORR1A2-int LTR MaLR 0 1792 1 1 1604 2502 57 28 0 chrX 133578780 133579098 -33071198 - ORR1A2 LTR MaLR 0 327 1 1 1604 26 0 0 0 chrX 133579617 133579643 -33070653 + AT_rich Low_complexity Low_complexity 1 26 0 1 1604 245 338 0 0 chrX 133579927 133579998 -33070298 + ID4_ SINE ID 2 72 -11 1 1604 21 71 0 0 chrX 133580023 133580065 -33070231 + AT_rich Low_complexity Low_complexity 1 42 0 1 1604 354 310 10 0 chrX 133580069 133580169 -33070127 - ID_B1 SINE B4 -7 217 117 1 1604 304 295 60 43 chrX 133580169 133580186 -33070110 - B1_Mur1 SINE Alu -7 142 24 1 1604 306 271 0 28 chrX 133580359 133580410 -33069886 + tRNA-Ala-GCA tRNA tRNA 6 55 -20 1 1604 213 94 0 0 chrX 133580410 133580442 -33069854 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 1604 306 271 0 28 chrX 133580442 133580462 -33069834 + tRNA-Ala-GCA tRNA tRNA 56 75 0 1 1604 1153 62 14 0 chrX 133580649 133580793 -33069503 - B1_Mus1 SINE Alu 0 148 3 1 1604 556 293 138 46 chrX 133580937 133581198 -33069098 + MLT1C LTR MaLR 179 463 -4 1 1604 1208 68 0 0 chrX 133581639 133581785 -33068511 + B1_Mus1 SINE Alu 1 146 -2 1 1604 293 272 25 34 chrX 133581847 133581965 -33068331 - PB1D10 SINE Alu 0 117 1 1 1604 2385 77 3 60 chrX 133582288 133582635 -33067661 - ORR1A2 LTR MaLR 0 327 1 1 1604 248 246 28 42 chrX 133582963 133583035 -33067261 + ID4 SINE ID 2 72 -11 1 1604 372 234 176 35 chrX 133583059 133583201 -33067095 + MER2 DNA MER2_type 121 282 -63 1 1604 232 317 163 37 chrX 133583380 133583570 -33066726 - L2c LINE L2 -154 3233 3020 1 1604 210 71 0 0 chrX 133583881 133583909 -33066387 + (GGA)n Simple_repeat Simple_repeat 2 29 0 1 1604 33 0 0 0 chrX 133584135 133584168 -33066128 + GC_rich Low_complexity Low_complexity 1 33 0 1 1604 389 299 30 91 chrX 133585130 133585307 -33064989 - ID_B1 SINE B4 -63 229 2 1 1604 335 275 12 12 chrX 133585307 133585388 -33064908 - ID4 SINE ID -1 82 2 1 1604 539 254 79 63 chrX 133585694 133585883 -33064413 - B3A SINE B2 -6 192 1 1 1604 360 64 0 0 chrX 133585887 133585934 -33064362 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1604 243 0 0 0 chrX 133586697 133586724 -33063572 + (TTAG)n Simple_repeat Simple_repeat 3 29 0 1 1604 487 223 41 54 chrX 133586724 133586871 -33063425 - B1F SINE Alu -2 147 3 1 1604 873 141 14 21 chrX 133587004 133587149 -33063147 - B1_Mur3 SINE Alu -5 144 1 1 1604 234 281 47 0 chrX 133587181 133587245 -33063051 - PB1D10 SINE Alu -9 108 42 1 1604 441 0 0 0 chrX 133587410 133587459 -33062837 + (TTTC)n Simple_repeat Simple_repeat 4 52 0 1 1604 410 94 0 15 chrX 133587500 133587565 -33062731 + (TTTC)n Simple_repeat Simple_repeat 1 64 0 1 1604 339 244 197 31 chrX 133587565 133587692 -33062604 - B1F1 SINE Alu -1 148 1 1 1604 277 269 116 36 chrX 133588914 133589026 -33061270 - PB1 SINE Alu -2 125 5 1 1604 243 0 0 0 chrX 133589314 133589341 -33060955 + (TTGG)n Simple_repeat Simple_repeat 2 28 0 1 1604 517 326 0 21 chrX 133589357 133589498 -33060798 - B1F2 SINE Alu 0 149 12 1 1604 24 0 0 0 chrX 133589521 133589545 -33060751 + AT_rich Low_complexity Low_complexity 1 24 0 1 1604 1186 56 0 0 chrX 133589545 133589689 -33060607 - B1_Mm SINE Alu -2 145 2 1 1604 290 259 0 0 chrX 133589710 133589768 -33060528 - B1F SINE Alu -9 140 83 1 1604 287 254 0 78 chrX 133589768 133589780 -33060516 - ID_B1 SINE B4 -2 200 152 1 1604 989 153 76 41 chrX 133590021 133590218 -33060078 + B3 SINE B2 1 204 -12 1 1604 506 319 36 29 chrX 133590932 133591213 -33059083 - B4A SINE B4 -8 284 2 1 1604 22 70 0 0 chrX 133591311 133591354 -33058942 + AT_rich Low_complexity Low_complexity 1 43 0 1 1604 1217 48 0 0 chrX 133591488 133591635 -33058661 + B1_Mus1 SINE Alu 2 148 0 1 1604 297 0 0 0 chrX 133591850 133591883 -33058413 + (GA)n Simple_repeat Simple_repeat 1 33 0 1 1604 261 274 39 64 chrX 133592321 133592399 -33057897 - B4A SINE B4 0 292 217 1 1604 941 167 167 0 chrX 133592416 133592596 -33057700 - B3 SINE B2 -6 210 1 1 1604 571 323 19 19 chrX 133592605 133592766 -33057530 - B4A SINE B4 -65 227 67 1 1604 683 255 171 8 chrX 133592879 133593124 -33057172 + B4 SINE B4 1 285 -7 1 1604 784 211 7 0 chrX 133593790 133593937 -33056359 - B1_Mur1 SINE Alu 0 149 2 1 1604 447 269 96 51 chrX 133594034 133594191 -33056105 - RSINE1 SINE B4 0 165 2 1 1604 258 283 84 9 chrX 133594344 133594451 -33055845 + B1F SINE Alu 32 146 -3 1 1604 408 40 0 0 chrX 133594542 133594592 -33055704 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1604 180 0 0 0 chrX 133594592 133594612 -33055684 + (GGGA)n Simple_repeat Simple_repeat 2 21 0 1 1604 702 171 41 41 chrX 133594871 133595017 -33055279 + B1_Mus1 SINE Alu 2 147 -1 1 1604 612 219 0 24 chrX 133595043 133595169 -33055127 + RSINE1 SINE B4 14 136 -29 1 1604 812 205 22 45 chrX 133595245 133595424 -33054872 - B3 SINE B2 -6 210 36 1 1604 334 299 9 78 chrX 133595442 133595558 -33054738 + RMER12 LTR ERVK 743 850 -472 1 1604 181 185 18 36 chrX 133595558 133595614 -33054682 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 1 1604 972 161 43 11 chrX 133595832 133596020 -33054276 - B2_Mm2 SINE B2 0 195 2 1 1604 768 213 22 51 chrX 133596086 133596264 -33054032 + B3A SINE B2 2 174 -24 2 1604 23 54 0 0 chrX 133596359 133596396 -33053900 + AT_rich Low_complexity Low_complexity 1 37 0 2 1604 3918 28 2 0 chrX 133596515 133596974 -33053322 - L1Md_A LINE L1 -1 6581 6122 2 1604 651 173 48 30 chrX 133598926 133599093 -33051203 + Lx4B LINE L1 6887 7056 -2 2 1604 281 294 52 22 chrX 133599236 133599437 -33050859 - L1MB4 LINE L1 -31 6149 5941 2 1604 370 371 0 24 chrX 133599460 133599587 -33050709 - RSINE1 SINE B4 -1 164 41 2 1604 318 226 91 31 chrX 133599610 133599721 -33050575 - L1MB8 LINE L1 -231 5947 5831 2 1604 468 212 103 31 chrX 133599721 133599916 -33050380 - L1M4 LINE L1 -654 5526 5318 2 1604 309 275 99 0 chrX 133600056 133600147 -33050149 - PB1D10 SINE Alu -10 107 8 2 1604 198 143 0 0 chrX 133600304 133600339 -33049957 + (T)n Simple_repeat Simple_repeat 1 35 0 2 1604 989 118 211 6 chrX 133600519 133600690 -33049606 - B3 SINE B2 -10 206 1 2 1604 312 232 39 32 chrX 133600752 133600908 -33049388 - L1M4 LINE L1 -1313 4833 4677 2 1604 730 221 37 0 chrX 133600914 133601050 -33049246 - B1_Mur1 SINE Alu -7 142 2 2 1604 471 244 186 33 chrX 133601055 133601420 -33048876 - L1M4 LINE L1 -1440 4706 4286 2 1604 310 255 148 0 chrX 133601576 133601672 -33048624 + PB1D10 SINE Alu 2 110 -38 2 1604 383 283 32 117 chrX 133601716 133602152 -33048144 - L1M4 LINE L1 -2059 4087 3689 2 1604 852 232 262 14 chrX 133602159 133602513 -33047783 - MT2A LTR ERVL 0 533 90 2 1604 832 42 246 0 chrX 133602513 133602631 -33047665 + B1_Mm SINE Alu 1 147 0 2 1604 255 238 0 0 chrX 133602650 133602713 -33047583 - MT2A LTR ERVL -432 101 39 2 1604 716 227 0 30 chrX 133602791 133602923 -33047373 + B1_Mur2 SINE Alu 8 135 -14 2 1604 657 36 0 0 chrX 133602937 133603021 -33047275 + (GAAA)n Simple_repeat Simple_repeat 2 85 0 2 1604 547 276 91 32 chrX 133604371 133604544 -33045752 - B4 SINE B4 0 292 131 2 1604 594 125 83 0 chrX 133604570 133604690 -33045606 - L1_Mus3 LINE L1 -1 6637 6508 2 1604 410 193 48 48 chrX 133605051 133605198 -33045098 + L1MA10 LINE L1 6184 6330 -4 2 1604 359 296 42 62 chrX 133605794 133605938 -33044358 - ID_B1 SINE B4 -2 222 82 2 1604 235 312 74 12 chrX 133606859 133606940 -33043356 + BC1_Mm scRNA scRNA 2 87 -65 2 1604 460 268 80 0 chrX 133607122 133607234 -33043062 + ID_B1 SINE B4 87 207 -17 2 1604 265 256 20 177 chrX 133607124 133607271 -33043025 + B1_Mus1 SINE Alu 9 132 -16 2 1604 27 0 0 0 chrX 133607684 133607711 -33042585 + AT_rich Low_complexity Low_complexity 1 27 0 2 1604 2767 49 84 11 chrX 133607810 133608179 -33042117 - MTB LTR MaLR 0 400 5 2 1604 233 273 30 0 chrX 133608192 133608258 -33042038 - B1F SINE Alu -5 144 77 2 1604 333 0 0 0 chrX 133609043 133609080 -33041216 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1604 239 93 23 0 chrX 133609340 133609383 -33040913 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2 1604 216 0 0 0 chrX 133609829 133609853 -33040443 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1604 315 287 105 6 chrX 133610301 133610473 -33039823 + MER5A DNA MER1_type 1 189 0 2 1604 448 233 44 0 chrX 133611605 133611695 -33038601 + B1F1 SINE Alu 3 96 -53 2 1604 24 0 0 0 chrX 133611715 133611739 -33038557 + AT_rich Low_complexity Low_complexity 1 24 0 2 1604 240 111 0 0 chrX 133612532 133612568 -33037728 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1604 991 279 99 57 chrX 133612816 133613461 -33036835 + L1MA5A LINE L1 5410 6064 -236 2 1604 198 0 0 0 chrX 133613847 133613869 -33036427 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1604 454 284 31 0 chrX 133614419 133614546 -33035750 - B1F SINE Alu -1 148 18 2 1604 227 200 0 24 chrX 133616694 133616767 -33033529 + T-rich Low_complexity Low_complexity 1 71 0 2 1604 507 263 119 6 chrX 133617225 133617401 -33032895 - L1MA5 LINE L1 -415 5885 5690 2 1604 268 293 60 10 chrX 133617530 133617630 -33032666 - MER5A1 DNA MER1_type -43 123 19 2 1604 690 65 0 0 chrX 133617868 133617960 -33032336 + (CA)n Simple_repeat Simple_repeat 2 93 0 2 1604 327 186 49 205 chrX 133617962 133618084 -33032212 + PB1D10 SINE Alu 15 117 0 2 1604 267 293 24 12 chrX 133618178 133618261 -33032035 - L2a LINE L2 -2 3424 3341 2 1604 1270 96 26 5 chrX 133618737 133618926 -33031370 - B2_Mm2 SINE B2 0 195 3 2 1604 261 226 0 31 chrX 133619632 133619696 -33030600 - B1F1 SINE Alu -87 62 1 2 1604 180 77 0 0 chrX 133619731 133619757 -33030539 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1604 200 217 0 0 chrX 133620068 133620114 -33030182 + A-rich Low_complexity Low_complexity 1 46 0 2 1604 265 293 8 121 chrX 133620114 133620246 -33030050 - Lx8 LINE L1 -141 7332 7216 2 1604 648 174 37 29 chrX 133620246 133620382 -33029914 - B3A SINE B2 -60 138 2 2 1604 771 188 0 0 chrX 133620625 133620763 -33029533 + B1_Mus1 SINE Alu 10 147 -1 2 1604 2549 97 82 14 chrX 133620779 133621206 -33029090 + Lx LINE L1 6199 6654 0 2 1604 25 0 0 0 chrX 133621446 133621471 -33028825 + AT_rich Low_complexity Low_complexity 1 25 0 2 1604 846 41 195 16 chrX 133621765 133621888 -33028408 + B1_Mm SINE Alu 1 145 -2 2 1604 630 221 13 46 chrX 133622048 133622200 -33028096 + B1_Mur1 SINE Alu 2 148 -1 2 1604 189 0 0 0 chrX 133622907 133622928 -33027368 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1604 531 0 0 0 chrX 133622928 133622986 -33027310 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 1604 26 82 0 0 chrX 133622989 133623050 -33027246 + AT_rich Low_complexity Low_complexity 1 61 0 2 1604 633 202 12 81 chrX 133623113 133623147 -33027149 - B3A SINE B2 0 198 173 2 1604 189 0 0 0 chrX 133623147 133623168 -33027128 + (GA)n Simple_repeat Simple_repeat 1 21 0 2 1604 270 0 0 0 chrX 133623168 133623197 -33027099 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1604 670 202 1 17 chrX 133623197 133623340 -33026956 - B3 SINE B2 -26 172 32 2 1604 1239 93 0 0 chrX 133623536 133623783 -33026513 + (TG)n Simple_repeat Simple_repeat 1 247 0 2 1604 21 0 0 0 chrX 133623786 133623807 -33026489 + AT_rich Low_complexity Low_complexity 1 21 0 2 1604 525 124 305 0 chrX 133623807 133623912 -33026384 - B1_Mus1 SINE Alu -11 137 1 2 1604 219 69 0 0 chrX 133624054 133624083 -33026213 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2 1604 411 277 36 21 chrX 133624098 133624238 -33026058 + B1F SINE Alu 1 142 -7 2 1604 398 240 16 0 chrX 133624247 133624349 -33025947 + ID4_ SINE ID 2 106 -46 2 1604 180 0 0 0 chrX 133624457 133624477 -33025819 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1604 198 208 0 0 chrX 133624555 133624603 -33025693 + CT-rich Low_complexity Low_complexity 3 50 0 2 1604 288 304 118 0 chrX 133624604 133624706 -33025590 - B1F SINE Alu -10 139 26 2 1604 452 270 84 68 chrX 133624830 133625021 -33025275 + B3A SINE B2 4 197 -1 2 1604 3401 59 96 41 chrX 133625028 133625520 -33024776 - L1_Mus2 LINE L1 0 6566 6048 2 1604 544 243 150 0 chrX 133625948 133626121 -33024175 - Lx8 LINE L1 -106 7367 7169 2 1604 1143 82 0 0 chrX 133626122 133626269 -33024027 + B1_Mus1 SINE Alu 2 148 0 2 1604 204 64 42 21 chrX 133626271 133626319 -33023977 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 2 1604 258 32 0 0 chrX 133626635 133626666 -33023630 + (CATA)n Simple_repeat Simple_repeat 4 34 0 2 1604 1080 260 137 65 chrX 133626961 133627723 -33022573 - RMER1A Other Other -561 505 1 2 1604 1213 41 0 20 chrX 133628391 133628541 -33021755 - B1_Mus2 SINE Alu 0 147 1 2 1604 345 257 38 0 chrX 133629120 133629225 -33021071 + MurSatRep1 Unknown Unknown 175 283 -1854 2 1604 25 0 0 0 chrX 133629814 133629839 -33020457 + AT_rich Low_complexity Low_complexity 1 25 0 2 1604 250 162 27 0 chrX 133630308 133630382 -33019914 + T-rich Low_complexity Low_complexity 4 79 0 2 1604 1203 34 7 0 chrX 133630730 133630876 -33019420 + B1_Mm SINE Alu 1 147 0 2 1604 315 0 0 0 chrX 133630877 133630912 -33019384 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 2 1604 219 69 0 0 chrX 133632348 133632377 -33017919 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 2 1604 314 98 20 0 chrX 133632389 133632440 -33017856 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1604 351 0 0 0 chrX 133632440 133632478 -33017818 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 1604 404 232 107 47 chrX 133632478 133632627 -33017669 - RSINE1 SINE B4 -5 160 3 2 1604 541 199 53 60 chrX 133632695 133632845 -33017451 + RLTR45-int LTR ERVK 1176 1324 -5920 2 1604 324 257 29 0 chrX 133632936 133633006 -33017290 + RSINE1 SINE B4 81 152 -13 2 1604 358 276 69 32 chrX 133633267 133633288 -33017008 + L1_Mur2 LINE L1 5099 5118 -1025 2 1604 1318 112 0 30 chrX 133633288 133633519 -33016777 - Lx LINE L1 -17 6637 6414 2 1604 627 205 55 16 chrX 133633519 133633715 -33016581 + L1_Mur2 LINE L1 5119 5323 -820 2 1604 1208 42 0 0 chrX 133633719 133633863 -33016433 + B1_Mus1 SINE Alu 3 146 -2 2 1604 222 133 26 26 chrX 133633864 133633941 -33016355 + (CAAA)n Simple_repeat Simple_repeat 1 77 0 2 1604 438 149 0 0 chrX 133633943 133634017 -33016279 + L1_Mur2 LINE L1 5288 5361 -516 2 1604 716 0 12 0 chrX 133634672 133634756 -33015540 + (GAAA)n Simple_repeat Simple_repeat 3 87 0 2 1604 542 199 53 60 chrX 133634904 133635054 -33015242 + RLTR45-int LTR ERVK 1176 1324 -5920 2 1604 21 0 0 0 chrX 133635403 133635424 -33014872 + AT_rich Low_complexity Low_complexity 1 21 0 2 1604 499 53 27 0 chrX 133635515 133635590 -33014706 - L1_Mus1 LINE L1 0 6567 6491 2 1604 407 60 0 0 chrX 133635591 133635641 -33014655 + L1_Mus1 LINE L1 6416 6465 -102 2 1604 486 0 0 0 chrX 133635847 133635901 -33014395 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 1604 369 242 162 0 chrX 133639673 133639772 -33010524 + PB1D9 SINE Alu 6 120 0 2 1604 606 287 38 0 chrX 133639778 133639935 -33010361 + RSINE1 SINE B4 3 165 0 2 1604 570 67 0 0 chrX 133640639 133640714 -33009582 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 2 1604 1308 101 15 36 chrX 133640716 133640912 -33009384 - B2_Mm1t SINE B2 0 193 2 3 1604 213 39 0 0 chrX 133641078 133641104 -33009192 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 1604 237 83 0 0 chrX 133642106 133642142 -33008154 + (G)n Simple_repeat Simple_repeat 1 36 0 3 1604 276 91 0 0 chrX 133643465 133643509 -33006787 + (G)n Simple_repeat Simple_repeat 1 44 0 3 1604 276 91 0 0 chrX 133644833 133644877 -33005419 + (G)n Simple_repeat Simple_repeat 1 44 0 3 1604 219 88 0 0 chrX 133646200 133646234 -33004062 + (G)n Simple_repeat Simple_repeat 1 34 0 3 1604 21 36 0 0 chrX 133647441 133647469 -33002827 + AT_rich Low_complexity Low_complexity 1 28 0 3 1604 635 228 97 0 chrX 133647546 133647691 -33002605 - B3 SINE B2 -1 215 57 3 1604 444 111 0 0 chrX 133647837 133647918 -33002378 + (TTCC)n Simple_repeat Simple_repeat 4 84 0 3 1604 531 0 0 0 chrX 133647920 133647979 -33002317 + (TC)n Simple_repeat Simple_repeat 1 59 0 3 1604 22 35 0 0 chrX 133648639 133648668 -33001628 + AT_rich Low_complexity Low_complexity 1 29 0 3 1604 539 209 20 80 chrX 133648690 133648841 -33001455 - RSINE1 SINE B4 -13 152 11 3 1604 3657 105 50 16 chrX 133649323 133649886 -33000410 - Lx2A1 LINE L1 -7 7001 6420 3 1604 492 59 0 0 chrX 133650120 133650188 -33000108 + (TTGGGG)n Simple_repeat Simple_repeat 1 68 0 3 1604 217 200 0 0 chrX 133650189 133650224 -33000072 + G-rich Low_complexity Low_complexity 1 35 0 3 1604 1550 25 0 43 chrX 133651283 133651505 -32998791 - L1Md_F2 LINE L1 0 6582 6382 3 1604 237 61 0 0 chrX 133651505 133651525 -32998771 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1604 746 56 0 0 chrX 133651525 133651632 -32998664 - L1Md_T LINE L1 0 6582 6476 3 1604 25 0 0 0 chrX 133651976 133652001 -32998295 + AT_rich Low_complexity Low_complexity 1 25 0 3 1604 225 119 0 0 chrX 133653018 133653060 -32997236 + (TCC)n Simple_repeat Simple_repeat 2 43 0 3 1604 288 341 6 11 chrX 133653827 133654002 -32996294 + C-rich Low_complexity Low_complexity 3 176 0 3 1604 198 103 0 0 chrX 133654248 133654277 -32996019 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1604 198 71 0 0 chrX 133654894 133654922 -32995374 + (CG)n Simple_repeat Simple_repeat 1 28 0 3 1604 594 185 0 48 chrX 133655334 133655459 -32994837 - B1_Mus1 SINE Alu 0 148 30 3 1604 894 68 0 0 chrX 133656259 133656377 -32993919 + (TG)n Simple_repeat Simple_repeat 2 119 0 3 1604 541 328 95 20 chrX 133656657 133657005 -32993291 + Tigger7 DNA MER2_type 28 401 -2090 3 1604 1183 68 7 0 chrX 133657017 133657164 -32993132 + B1_Mus1 SINE Alu 1 148 0 3 1604 309 348 42 0 chrX 133657317 133657435 -32992861 + ID_B1 SINE B4 88 210 -14 3 1604 486 0 0 0 chrX 133657459 133657513 -32992783 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 1604 436 242 116 8 chrX 133658422 133658551 -32991745 - B1F1 SINE Alu -5 144 2 3 1604 334 301 52 26 chrX 133658561 133658677 -32991619 - PB1D7 SINE Alu 0 120 2 3 1604 22 80 0 0 chrX 133659047 133659097 -32991199 + AT_rich Low_complexity Low_complexity 1 50 0 3 1604 819 238 15 20 chrX 133659110 133659307 -32990989 - B3 SINE B2 -19 197 2 3 1604 474 323 21 26 chrX 133659328 133659519 -32990777 + Tigger7 DNA MER2_type 429 618 -1873 3 1604 324 224 102 17 chrX 133659548 133659663 -32990633 + Tigger7 DNA MER2_type 742 866 -1625 3 1604 472 312 36 54 chrX 133659663 133659794 -32990502 + RSINE1 SINE B4 3 128 -37 3 1604 450 0 0 0 chrX 133659794 133659844 -32990452 + (TATAA)n Simple_repeat Simple_repeat 5 54 0 3 1604 472 312 36 54 chrX 133659844 133659878 -32990418 + RSINE1 SINE B4 129 165 0 3 1604 251 200 0 0 chrX 133659927 133659977 -32990319 + Tigger7 DNA MER2_type 863 912 -1579 3 1604 433 249 42 68 chrX 133659960 133660150 -32990146 + MER44A DNA MER2_type 55 239 -100 3 1604 299 242 137 0 chrX 133660207 133660302 -32989994 - L1M4 LINE L1 -543 5631 5524 3 1604 906 218 68 19 chrX 133660368 133660574 -32989722 + B3 SINE B2 1 216 0 3 1604 396 0 0 0 chrX 133660749 133660793 -32989503 + (TTA)n Simple_repeat Simple_repeat 3 46 0 3 1604 288 0 0 0 chrX 133660793 133660824 -32989472 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1604 306 303 20 10 chrX 133660845 133660945 -32989351 - RSINE1 SINE B4 -62 103 3 3 1604 485 299 75 72 chrX 133661023 133661301 -32988995 - B4 SINE B4 -7 285 7 3 1604 195 161 35 18 chrX 133661639 133661696 -32988600 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 3 1604 504 187 16 8 chrX 133661755 133661879 -32988417 + (CATA)n Simple_repeat Simple_repeat 2 126 0 3 1604 288 0 0 0 chrX 133661924 133661956 -32988340 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1604 246 148 0 0 chrX 133662726 133662780 -32987516 + (G)n Simple_repeat Simple_repeat 1 54 0 3 1604 192 143 0 0 chrX 133663077 133663119 -32987177 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 3 1604 1125 102 0 0 chrX 133663123 133663270 -32987026 - B1_Mus1 SINE Alu 0 148 2 3 1604 1886 60 0 0 chrX 133663288 133663521 -32986775 - L1_Mus1 LINE L1 -1 6566 6334 3 1604 546 108 333 0 chrX 133665237 133665348 -32984948 + B1_Mus1 SINE Alu 1 148 0 3 1604 294 148 0 0 chrX 133665348 133665402 -32984894 + (A)n Simple_repeat Simple_repeat 1 54 0 3 1604 378 0 0 0 chrX 133665684 133665726 -32984570 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 3 1604 288 0 0 0 chrX 133667008 133667040 -32983256 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 3 1604 1305 34 0 0 chrX 133667042 133667189 -32983107 - B1_Mus1 SINE Alu -1 147 1 3 1604 285 100 0 0 chrX 133667262 133667312 -32982984 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1604 678 254 0 0 chrX 133667312 133667434 -32982862 - RSINE1 SINE B4 -41 124 3 3 1604 384 22 0 0 chrX 133667517 133667562 -32982734 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 1604 905 216 103 0 chrX 133667570 133667755 -32982541 + B3 SINE B2 9 212 -4 3 1604 845 223 0 7 chrX 133667856 133668005 -32982291 - B1_Mur4 SINE Alu -1 149 2 3 1604 872 195 147 7 chrX 133668045 133668324 -32981972 - Lx9 LINE L1 0 7644 7327 3 1604 579 225 58 121 chrX 133668336 133668431 -32981865 + Lx9 LINE L1 6898 6999 -645 3 1604 1259 43 0 0 chrX 133668431 133668571 -32981725 + B1_Mus2 SINE Alu 2 141 -6 3 1604 441 0 0 0 chrX 133668573 133668622 -32981674 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 1604 579 225 58 121 chrX 133668622 133668730 -32981566 + Lx9 LINE L1 7000 7091 -553 3 1604 1872 92 123 0 chrX 133668740 133669024 -32981272 - ORR1A2 LTR MaLR -8 319 1 3 1604 805 211 16 32 chrX 133669050 133669236 -32981060 + Lx9 LINE L1 7106 7288 -356 3 1604 231 33 0 0 chrX 133669334 133669356 -32980940 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1604 1075 86 58 0 chrX 133669356 133669495 -32980801 - B1_Mm SINE Alu 0 147 1 3 1604 231 33 0 0 chrX 133669495 133669502 -32980794 + (T)n Simple_repeat Simple_repeat 1 7 0 3 1604 7427 62 0 4 chrX 133669508 133670431 -32979865 - L1_Mus2 LINE L1 0 6566 5648 3 1604 453 298 0 55 chrX 133670936 133671064 -32979232 - RSINE1 SINE B4 -44 121 1 3 1604 362 218 103 0 chrX 133671502 133671589 -32978707 + PB1D10 SINE Alu 1 96 -21 3 1604 1552 38 5 31 chrX 133671823 133671853 -32978443 - B2_Mm1t SINE B2 -7 186 161 3 1604 186 43 0 0 chrX 133671853 133671876 -32978420 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 3 1604 1552 38 5 31 chrX 133671876 133672036 -32978260 - B2_Mm1t SINE B2 -33 160 1 3 1604 4566 42 2 26 chrX 133672046 133672588 -32977708 - L1Md_F2 LINE L1 -13 6569 6041 3 1604 916 327 65 30 chrX 133672848 133673352 -32976944 - Lx8 LINE L1 -158 7315 6794 3 1604 851 263 42 106 chrX 133673373 133673654 -32976642 + B4A SINE B4 2 269 -23 3 1604 948 53 53 0 chrX 133673654 133673823 -32976473 + (CA)n Simple_repeat Simple_repeat 1 178 0 3 1604 851 263 42 106 chrX 133673823 133673852 -32976444 + B4A SINE B4 270 292 0 3 1604 315 85 81 46 chrX 133673852 133674025 -32976271 + (CA)n Simple_repeat Simple_repeat 1 179 0 3 1604 468 0 0 0 chrX 133674058 133674110 -32976186 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1604 309 235 103 0 chrX 133674250 133674318 -32975978 - ID_B1 SINE B4 -4 220 146 3 1604 2420 245 68 49 chrX 133674322 133675057 -32975239 - RMER13A LTR ERVK 0 860 112 3 1604 1090 141 125 0 chrX 133675089 133675281 -32975015 - Lx9 LINE L1 -630 7014 6799 3 1604 487 315 14 14 chrX 133675356 133675501 -32974795 - RSINE1 SINE B4 -10 155 11 3 1604 855 78 0 0 chrX 133675555 133675671 -32974625 + (TTC)n Simple_repeat Simple_repeat 2 117 0 3 1604 286 235 162 29 chrX 133675735 133675840 -32974456 - RSINE1 SINE B4 -44 121 3 3 1604 2080 147 5 76 chrX 133677147 133677537 -32972759 + ORR1B1 LTR MaLR 1 394 0 3 1604 415 297 78 21 chrX 133677689 133677830 -32972466 - B1F1 SINE Alu 0 149 1 3 1604 724 267 14 24 chrX 133678210 133678421 -32971875 - B3 SINE B2 -3 213 5 3 1604 4503 116 24 2 chrX 133678742 133679375 -32970921 + Lx LINE L1 6007 6653 -1 3 1604 6384 158 37 3 chrX 133679441 133680986 -32969310 - Lx2B LINE L1 0 7058 5357 3 1604 606 93 0 0 chrX 133680986 133681072 -32969224 + (TTTC)n Simple_repeat Simple_repeat 1 86 0 3 1604 5585 94 5 11 chrX 133681081 133681843 -32968453 - L1_Mus3 LINE L1 -5 6633 5876 3 1604 2222 117 53 6 chrX 133681843 133682204 -32968092 - Lx2B LINE L1 -525 5352 4975 3 1604 7070 125 13 7 chrX 133682195 133683320 -32966976 + L1_Mur2 LINE L1 3672 4803 -1074 3 1604 272 275 20 90 chrX 133683320 133683420 -32966876 - RLTR31_Mur LTR ERVK 0 553 461 3 1604 765 274 54 127 chrX 133683459 133683957 -32966339 - RLTR17 LTR ERVK -126 566 105 3 1604 1320 118 42 5 chrX 133683960 133684173 -32966123 + L1_Mur2 LINE L1 4794 5014 -863 3 1604 482 252 270 0 chrX 133684198 133684309 -32965987 - B1_Mur1 SINE Alu -7 142 2 3 1604 1399 89 5 37 chrX 133684508 133684695 -32965601 - B2_Mm2 SINE B2 -14 181 1 3 1604 708 250 118 44 chrX 133684768 133685107 -32965189 - L1MC4 LINE L1 -13 8029 7666 3 1604 36 0 0 0 chrX 133685228 133685264 -32965032 + AT_rich Low_complexity Low_complexity 1 36 0 3 1604 1071 227 24 10 chrX 133685556 133685765 -32964531 + B3 SINE B2 2 213 -3 3 1604 310 254 58 25 chrX 133685975 133686096 -32964200 - L1MC4 LINE L1 -484 7558 7434 3 1604 352 216 20 0 chrX 133686111 133686213 -32964083 + (TA)n Simple_repeat Simple_repeat 1 104 0 3 1604 1062 208 69 0 chrX 133686222 133686424 -32963872 - B3 SINE B2 0 216 1 4 1604 368 262 0 29 chrX 133686435 133686538 -32963758 - PB1D7 SINE Alu -6 114 15 4 1604 3092 52 0 11 chrX 133687048 133687418 -32962878 - L1_Mus2 LINE L1 0 6566 6201 4 1604 246 213 218 39 chrX 133687774 133687852 -32962444 + RSINE1 SINE B4 4 95 -70 4 1604 225 0 0 0 chrX 133687856 133687881 -32962415 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 1604 321 26 0 0 chrX 133688395 133688433 -32961863 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 4 1604 741 203 31 0 chrX 133688433 133688561 -32961735 - B1_Mus1 SINE Alu -12 136 5 4 1604 737 332 47 9 chrX 133688570 133688892 -32961404 + MER2 DNA MER2_type 11 344 -1 4 1604 28 0 0 0 chrX 133688892 133688920 -32961376 + AT_rich Low_complexity Low_complexity 1 28 0 4 1604 609 173 259 12 chrX 133689207 133689377 -32960919 - B3 SINE B2 -4 212 1 4 1604 860 204 43 0 chrX 133689382 133689544 -32960752 - ID_B1 SINE B4 -4 220 52 4 1604 184 362 0 0 chrX 133689668 133689737 -32960559 + L2a LINE L2 3298 3366 -60 4 1604 201 74 0 0 chrX 133690112 133690139 -32960157 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 4 1604 482 246 118 7 chrX 133690164 133690299 -32959997 - B3A SINE B2 -46 152 3 4 1604 208 358 24 31 chrX 133690368 133690495 -32959801 - L2b LINE L2 -237 3138 3013 4 1604 189 346 129 25 chrX 133690708 133690871 -32959425 + L2b LINE L2 2975 3154 -221 4 1604 249 292 97 9 chrX 133690887 133691001 -32959295 - MLT1A LTR MaLR -12 362 239 4 1604 278 292 18 36 chrX 133691192 133691206 -32959090 + polypyrimidine Low_complexity Low_complexity 98 109 0 4 1604 1057 101 0 17 chrX 133691206 133691387 -32958909 + (TCTCC)n Simple_repeat Simple_repeat 3 180 0 4 1604 278 292 18 36 chrX 133691387 133691482 -32958814 + CT-rich Low_complexity Low_complexity 2 97 0 4 1604 300 319 4 44 chrX 133691641 133691799 -32958497 - PB1D10 SINE Alu -1 148 2 4 1604 194 321 24 12 chrX 133692339 133692421 -32957875 - MIRb SINE MIR -138 130 48 4 1604 2333 162 21 29 chrX 133692921 133693341 -32956955 - Lx4B LINE L1 -4 7054 6638 4 1605 2860 59 0 9 chrX 133694213 133694555 -32955741 - L1_Mus1 LINE L1 0 6567 6229 4 1605 218 367 111 0 chrX 133694713 133694893 -32955403 - MIR SINE MIR -37 225 26 4 1605 360 0 0 0 chrX 133694897 133694937 -32955359 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1605 765 291 80 17 chrX 133694943 133694996 -32955300 - B4A SINE B4 -13 279 214 4 1605 609 14 0 0 chrX 133694996 133695066 -32955230 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 4 1605 765 291 80 17 chrX 133695066 133695250 -32955046 - B4A SINE B4 -79 213 27 4 1605 827 257 23 45 chrX 133695606 133695826 -32954470 + B3 SINE B2 2 216 0 4 1605 368 292 22 0 chrX 133696057 133696146 -32954150 - PB1D10 SINE Alu -26 91 1 4 1605 1373 203 48 45 chrX 133696162 133696471 -32953825 - Lx5 LINE L1 -15 7035 6726 4 1605 27 29 0 0 chrX 133698012 133698046 -32952250 + AT_rich Low_complexity Low_complexity 1 34 0 4 1605 1171 71 0 56 chrX 133698114 133698294 -32952002 - B2_Mm2 SINE B2 -25 170 1 4 1605 3184 223 103 94 chrX 133699199 133700434 -32949862 + RMER1A Other Other 6 917 -113 4 1605 288 0 0 0 chrX 133700434 133700466 -32949830 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1605 3184 206 105 116 chrX 133700466 133700577 -32949719 + RMER1A Other Other 918 1029 -1 4 1605 249 270 149 50 chrX 133702092 133702213 -32948083 + LTR33 LTR ERVL 52 184 -331 4 1605 180 27 53 26 chrX 133702214 133702252 -32948044 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1605 441 316 94 30 chrX 133702307 133702509 -32947787 + MER58A DNA MER1_type 4 218 -6 4 1605 584 91 0 11 chrX 133702721 133702758 -32947538 + (TC)n Simple_repeat Simple_repeat 1 37 0 4 1605 996 124 11 11 chrX 133702758 133702937 -32947359 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 4 1605 584 91 0 11 chrX 133702937 133702988 -32947308 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 1605 573 256 202 64 chrX 133703006 133703194 -32947102 - ID_B1 SINE B4 -8 216 3 4 1605 322 252 213 37 chrX 133703436 133703704 -32946592 - L1MD LINE L1 -2416 5579 5265 4 1605 1747 36 0 0 chrX 133704005 133704198 -32946098 - B2_Mm1t SINE B2 0 193 1 4 1605 342 175 0 0 chrX 133704477 133704534 -32945762 + B3A SINE B2 3 59 -139 4 1605 530 203 7 104 chrX 133704535 133704689 -32945607 - ID_B1 SINE B4 -2 222 84 4 1605 1000 67 8 0 chrX 133704556 133704690 -32945606 - B1_Mus1 SINE Alu -12 136 2 4 1605 722 210 14 27 chrX 133704698 133704845 -32945451 + B3 SINE B2 58 202 -14 4 1605 766 163 19 13 chrX 133704876 133705031 -32945265 + RMER1C Other Other 1183 1338 -4 4 1605 406 219 41 60 chrX 133705036 133705188 -32945108 + Lx2B LINE L1 6872 7054 -4 4 1605 1457 187 45 111 chrX 133705285 133705689 -32944607 - ORR1C2 LTR MaLR -2 382 6 4 1605 451 187 0 0 chrX 133705893 133705968 -32944328 + MTEb LTR MaLR 6 80 -299 4 1605 269 319 21 0 chrX 133705968 133705987 -32944309 + MT2A LTR ERVL 6 101 -432 4 1605 323 317 0 0 chrX 133705980 133706062 -32944234 + MTEb LTR MaLR 135 216 -163 4 1605 7654 22 1 6 chrX 133706062 133706943 -32943353 - L1Md_F3 LINE L1 0 6584 5708 4 1605 603 220 120 0 chrX 133706943 133707093 -32943203 + MTEb LTR MaLR 212 379 0 4 1605 3584 244 73 82 chrX 133707328 133707987 -32942309 - Lx5 LINE L1 -29 7431 6506 4 1605 192 27 81 0 chrX 133707987 133708024 -32942272 + (ATG)n Simple_repeat Simple_repeat 2 41 0 4 1605 3584 240 54 82 chrX 133708024 133708754 -32941542 - Lx5 LINE L1 -545 6505 5794 4 1605 1705 42 0 0 chrX 133708754 133708946 -32941350 - B2_Mm1t SINE B2 0 193 2 4 1605 3584 240 54 82 chrX 133708946 133709087 -32941209 - Lx5 LINE L1 -1257 5793 5662 4 1605 922 226 91 0 chrX 133709201 133709400 -32940896 - Lx6 LINE L1 -15 7445 7229 4 1605 360 94 0 0 chrX 133709499 133709552 -32940744 + (TATG)n Simple_repeat Simple_repeat 2 54 0 4 1605 761 306 6 0 chrX 133709571 133709744 -32940552 - B3A SINE B2 -22 176 3 4 1605 293 309 0 12 chrX 133709754 133709836 -32940460 - PB1D10 SINE Alu -6 111 31 4 1605 755 214 113 16 chrX 133710582 133710767 -32939529 - MTE2a LTR MaLR -2 377 175 4 1605 1246 185 24 9 chrX 133711589 133711802 -32938494 - B3 SINE B2 0 216 1 4 1605 270 56 0 0 chrX 133711805 133711841 -32938455 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 1605 724 277 66 25 chrX 133713703 133713947 -32936349 - MER2 DNA MER2_type -1 344 91 4 1605 554 0 15 0 chrX 133714262 133714328 -32935968 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 4 1605 228 303 203 8 chrX 133715129 133715252 -32935044 - MIRb SINE MIR -7 261 115 4 1605 378 0 0 0 chrX 133715413 133715455 -32934841 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1605 462 61 0 0 chrX 133715455 133715521 -32934775 + (GA)n Simple_repeat Simple_repeat 2 67 0 4 1605 273 299 13 0 chrX 133715521 133715598 -32934698 - MER113A DNA MER1_type -235 79 2 4 1605 489 221 176 24 chrX 133715817 133715942 -32934354 - ID_B1 SINE B4 -11 213 70 4 1605 23 68 0 0 chrX 133715962 133716006 -32934290 + AT_rich Low_complexity Low_complexity 1 44 0 4 1605 837 261 43 0 chrX 133716007 133716214 -32934082 - B3 SINE B2 0 216 1 4 1605 244 395 66 40 chrX 133716975 133717400 -32932896 + L2 LINE L2 2330 2765 -654 4 1605 264 164 90 0 chrX 133718049 133718116 -32932180 - L1M2 LINE L1 -3321 2822 2750 4 1605 31 44 0 0 chrX 133718223 133718268 -32932028 + AT_rich Low_complexity Low_complexity 1 45 0 4 1605 354 281 0 0 chrX 133719111 133719200 -32931096 + PB1D10 SINE Alu 27 115 -2 4 1605 6203 97 22 52 chrX 133719344 133720501 -32929795 - L1VL1 LINE L1 -1789 1909 906 4 1605 1308 54 0 0 chrX 133720501 133720648 -32929648 - B1_Mm SINE Alu 0 147 1 4 1605 3662 81 26 0 chrX 133720648 133721145 -32929151 - L1VL2 LINE L1 -5512 823 314 4 1605 1015 252 71 16 chrX 133721416 133721727 -32928569 + MER2 DNA MER2_type 11 338 -7 4 1605 191 326 0 0 chrX 133722037 133722083 -32928213 - MIR SINE MIR -204 58 13 4 1605 228 311 14 0 chrX 133722126 133722200 -32928096 + MIR3 SINE MIR 111 185 -23 4 1605 2020 197 96 77 chrX 133722366 133722927 -32927369 + RMER4B LTR ERVK 14 585 0 4 1605 745 152 0 0 chrX 133722927 133723041 -32927255 - URR1B DNA MER1_type -26 199 86 4 1605 2749 145 2 2 chrX 133723702 133724123 -32926173 + MTC LTR MaLR 1 421 0 4 1605 275 238 15 31 chrX 133724268 133724328 -32925968 - ID2 SINE ID -19 64 5 4 1605 645 14 0 0 chrX 133724328 133724402 -32925894 + (TC)n Simple_repeat Simple_repeat 1 74 0 4 1605 410 325 0 9 chrX 133724408 133724523 -32925773 - PB1D10 SINE Alu -1 116 3 4 1605 259 363 63 6 chrX 133724532 133724745 -32925551 + MIRc SINE MIR 34 267 -1 4 1605 226 349 16 198 chrX 133726250 133726432 -32923864 - MLT1A LTR MaLR -122 252 104 4 1605 351 0 0 0 chrX 133726473 133726512 -32923784 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1605 251 298 174 36 chrX 133726762 133726929 -32923367 - MIRb SINE MIR -5 263 74 4 1605 411 272 15 17 chrX 133727213 133727345 -32922951 + MLT1B LTR MaLR 61 187 -187 4 1605 516 314 52 7 chrX 133727632 133727786 -32922510 + MER5A1 DNA MER1_type 3 163 -3 4 1605 1066 201 28 23 chrX 133728204 133728418 -32921878 + B3 SINE B2 1 215 -1 4 1605 678 234 7 14 chrX 133729380 133729527 -32920769 + B1F SINE Alu 4 149 0 4 1605 454 226 0 47 chrX 133729584 133729691 -32920605 + B1F2 SINE Alu 46 147 -2 4 1605 393 270 165 9 chrX 133729840 133730044 -32920252 - MIR SINE MIR -5 257 23 4 1605 256 263 0 0 chrX 133730131 133730207 -32920089 - L1MA7 LINE L1 -50 6241 6166 4 1605 2142 172 17 36 chrX 133730281 133730692 -32919604 - MTC LTR MaLR -3 418 16 4 1605 1012 148 212 31 chrX 133730692 133730754 -32919542 - Lx9 LINE L1 -79 7565 7477 5 1605 291 54 0 0 chrX 133730754 133730791 -32919505 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1605 1012 148 212 31 chrX 133730791 133731021 -32919275 - Lx9 LINE L1 -168 7476 7220 5 1605 303 28 0 0 chrX 133731027 133731063 -32919233 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1605 1077 279 32 7 chrX 133731090 133731372 -32918924 - B4A SINE B4 0 292 4 5 1605 275 211 325 0 chrX 133731410 133731533 -32918763 - L1MA7 LINE L1 -235 6056 5894 4 1605 446 333 11 22 chrX 133731586 133731770 -32918526 - MIR SINE MIR -3 259 78 5 1605 1204 68 0 0 chrX 133731938 133732086 -32918210 - B1_Mus1 SINE Alu 0 148 1 5 1605 441 0 0 0 chrX 133732599 133732648 -32917648 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1605 617 281 11 39 chrX 133733035 133733213 -32917083 - MER5B DNA MER1_type 0 178 6 5 1605 1224 324 16 94 chrX 133733455 133734030 -32916266 + MLT1F2 LTR MaLR 5 534 -26 5 1605 204 146 91 0 chrX 133734032 133734087 -32916209 + (ATATG)n Simple_repeat Simple_repeat 4 63 0 5 1605 361 341 43 43 chrX 133734128 133734312 -32915984 - MER5A DNA MER1_type -4 185 2 5 1605 9944 20 2 0 chrX 133734422 133736306 -32913990 - L1Md_A LINE L1 0 6582 4696 5 1605 245 0 0 0 chrX 133736305 133736334 -32913962 + L1_Mm LINE L1 2680 2708 -3175 5 1605 7767 37 11 6 chrX 133736688 133737629 -32912667 + L1Md_F2 LINE L1 5637 6581 -1 5 1605 8107 29 4 3 chrX 133739234 133740353 -32909943 - L1Md_F3 LINE L1 -1 6583 5464 5 1605 2291 52 3 0 chrX 133740348 133740658 -32909638 + L1Md_F3 LINE L1 5160 5470 -413 5 1605 186 43 0 0 chrX 133741420 133741443 -32908853 + (TTAGGG)n Simple_repeat Simple_repeat 4 26 0 5 1605 1523 34 17 0 chrX 133742812 133742991 -32907305 + B2_Mm2 SINE B2 2 183 -12 5 1605 1120 95 0 7 chrX 133742991 133743139 -32907157 + B1_Mus1 SINE Alu 1 148 0 5 1605 473 198 0 0 chrX 133743227 133743314 -32906982 - Lx6 LINE L1 -82 7378 7293 5 1605 507 136 0 0 chrX 133743314 133743402 -32906894 + Lx6 LINE L1 7373 7460 0 5 1605 1841 68 0 4 chrX 133744031 133744284 -32906012 - Lx3C LINE L1 -402 6574 6323 5 1605 1561 137 118 57 chrX 133744281 133744630 -32905666 + Lx3C LINE L1 6604 6973 -3 5 1605 1161 68 7 0 chrX 133744755 133744901 -32905395 + B1_Mus2 SINE Alu 1 147 0 5 1605 378 94 0 0 chrX 133744901 133744965 -32905331 + (A)n Simple_repeat Simple_repeat 1 64 0 5 1605 182 350 90 14 chrX 133745211 133745356 -32904940 + L2 LINE L2 781 936 -2483 5 1605 734 328 6 0 chrX 133745828 133746005 -32904291 - B4A SINE B4 -112 180 3 5 1605 192 380 50 17 chrX 133746081 133746319 -32903977 + L2 LINE L2 1714 1959 -1460 5 1605 315 321 43 35 chrX 133746442 133746558 -32903738 - MIRb SINE MIR -132 136 20 5 1605 246 211 0 37 chrX 133746675 133746729 -32903567 + L2b LINE L2 3323 3374 -1 5 1605 261 293 207 9 chrX 133746806 133746976 -32903320 - MIR3 SINE MIR -2 206 3 5 1605 282 373 88 17 chrX 133747502 133747653 -32902643 + MIR SINE MIR 43 200 -68 5 1605 1635 82 13 0 chrX 133747673 133747904 -32902392 + Lx2 LINE L1 6412 6645 -352 5 1605 1117 118 98 0 chrX 133747902 133747994 -32902302 + Lx2 LINE L1 6775 6866 -131 5 1605 204 40 0 0 chrX 133747994 133748019 -32902277 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 5 1605 1117 118 98 0 chrX 133748019 133748129 -32902167 + Lx2 LINE L1 6867 6995 -2 5 1605 362 288 72 43 chrX 133748272 133748410 -32901886 - MLT1H LTR MaLR -15 534 393 5 1605 191 269 77 0 chrX 133748723 133748775 -32901521 + MIRb SINE MIR 157 212 -56 5 1605 782 204 204 0 chrX 133749121 133749297 -32900999 - B3 SINE B2 -4 212 1 5 1605 686 264 42 54 chrX 133749297 133749557 -32900739 + Lx8 LINE L1 7039 7295 -178 5 1605 387 202 0 0 chrX 133749594 133749693 -32900603 + (CAA)n Simple_repeat Simple_repeat 1 99 0 5 1605 21 36 0 0 chrX 133750151 133750179 -32900117 + AT_rich Low_complexity Low_complexity 1 28 0 5 1605 337 250 98 24 chrX 133750366 133750428 -32899868 - L1MA4 LINE L1 -412 5888 5828 5 1605 347 0 23 0 chrX 133750428 133750471 -32899825 + (TC)n Simple_repeat Simple_repeat 2 45 0 5 1605 337 250 98 24 chrX 133750471 133750572 -32899724 - L1MA4 LINE L1 -473 5827 5713 5 1605 27 0 0 0 chrX 133750610 133750637 -32899659 + AT_rich Low_complexity Low_complexity 1 27 0 5 1605 343 292 103 7 chrX 133750823 133750978 -32899318 - Charlie1 DNA MER1_type -2527 254 85 5 1605 239 323 34 117 chrX 133751076 133751255 -32899041 + MIRb SINE MIR 88 251 -17 5 1605 236 277 166 62 chrX 133751567 133751805 -32898491 - L2a LINE L2 -6 3381 3121 5 1605 1033 315 216 34 chrX 133751827 133752972 -32897324 - L2a LINE L2 -516 2903 1551 5 1605 1409 241 85 42 chrX 133753018 133753420 -32896876 - MTD LTR MaLR 0 419 1 5 1605 234 351 170 19 chrX 133753603 133753809 -32896487 - L2a LINE L2 -2734 685 449 5 1605 221 326 179 31 chrX 133753837 133754128 -32896168 - L2a LINE L2 -2886 533 200 5 1605 1677 186 160 3 chrX 133754225 133754587 -32895709 - MTD LTR MaLR 0 419 1 5 1605 4071 118 199 0 chrX 133754589 133755141 -32895155 + L1VL4 LINE L1 69 701 -5601 5 1605 1011 105 0 47 chrX 133755141 133755311 -32894985 + L1Md_F2 LINE L1 6421 6582 0 5 1605 8384 79 10 1 chrX 133755311 133756647 -32893649 + L1VL4 LINE L1 702 2090 -1469 5 1605 6498 80 20 0 chrX 133756646 133757809 -32892487 + L1_Mus1 LINE L1 5314 6499 -68 5 1605 1028 285 78 16 chrX 133757853 133758238 -32892058 - MER68-int LTR ERVL -1448 1542 1134 5 1605 516 306 69 0 chrX 133758284 133758428 -32891868 - RSINE1 SINE B4 -8 157 4 5 1605 393 255 228 12 chrX 133758584 133758838 -32891458 - MER68-int LTR ERVL -2000 990 682 5 1605 674 296 212 31 chrX 133759402 133759789 -32890507 - L3 LINE CR1 -461 4028 3572 5 1605 229 402 30 25 chrX 133760420 133760619 -32889677 + MIR SINE MIR 6 205 -57 5 1605 318 289 150 11 chrX 133760764 133761044 -32889252 - L1MC4a LINE L1 -292 7590 7272 5 1605 513 0 0 0 chrX 133761149 133761206 -32889090 + (TTCC)n Simple_repeat Simple_repeat 3 59 0 5 1605 6320 163 95 39 chrX 133761215 133762199 -32888097 - Lx5 LINE L1 -2 7048 5971 5 1605 2271 103 25 0 chrX 133762199 133762518 -32887778 + ORR1A2 LTR MaLR 1 327 0 5 1605 6320 163 95 39 chrX 133762518 133762906 -32887390 - Lx5 LINE L1 -1080 5970 5599 5 1605 835 235 91 10 chrX 133762912 133763110 -32887186 - B3 SINE B2 0 216 3 5 1605 1664 249 144 14 chrX 133763488 133763974 -32886322 - RMER15 LTR ERVL 0 575 27 5 1605 424 264 7 33 chrX 133764046 133764199 -32886097 - L1MC4a LINE L1 -1314 6568 6420 5 1605 309 274 253 32 chrX 133765004 133765162 -32885134 + L2c LINE L2 3183 3387 0 5 1605 481 328 29 84 chrX 133765415 133765758 -32884538 - L2 LINE L2 -493 2926 2603 5 1605 807 11 0 0 chrX 133766531 133766623 -32883673 + (CAG)n Simple_repeat Simple_repeat 2 93 0 5 1605 3409 20 10 0 chrX 133766646 133767038 -32883258 - MTA_Mm LTR MaLR 0 396 1 5 1605 8072 8 1 1 chrX 133768130 133769097 -32881199 - L1Md_A LINE L1 0 6582 5608 5 1605 462 18 0 0 chrX 133769126 133769181 -32881115 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1605 654 290 0 21 chrX 133769456 133769643 -32880653 - B3A SINE B2 -14 184 2 5 1605 1168 256 25 111 chrX 133769643 133770131 -32880165 - RMER4A LTR ERVK 0 466 21 5 1605 234 0 0 0 chrX 133770283 133770309 -32879987 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 5 1605 209 294 58 12 chrX 133770349 133770435 -32879861 - MIR SINE MIR -29 233 144 5 1605 230 242 0 0 chrX 133770814 133770880 -32879416 + Lx9 LINE L1 7422 7487 -157 5 1605 706 269 6 24 chrX 133770922 133771086 -32879210 - B3 SINE B2 -5 211 51 5 1605 486 331 93 40 chrX 133771084 133771235 -32879061 - B4 SINE B4 -131 161 3 5 1605 33 56 0 0 chrX 133771237 133771291 -32879005 + AT_rich Low_complexity Low_complexity 1 54 0 5 1605 375 23 0 0 chrX 133771291 133771335 -32878961 + (TC)n Simple_repeat Simple_repeat 1 44 0 5 1605 426 20 0 0 chrX 133771335 133771385 -32878911 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1605 534 100 240 0 chrX 133771418 133771518 -32878778 - B2_Mm2 SINE B2 -70 125 2 5 1605 1090 45 15 0 chrX 133772268 133772409 -32877887 + B2_Mm2 SINE B2 15 158 -35 5 1605 249 33 0 0 chrX 133772409 133772439 -32877857 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 5 1605 1013 101 38 6 chrX 133772439 133772457 -32877839 + B2_Mm1t SINE B2 159 179 -14 5 1605 340 299 164 14 chrX 133772971 133773185 -32877111 - L1M3e LINE L1 -6775 255 10 5 1605 232 256 22 55 chrX 133773674 133773765 -32876531 - Tigger16a DNA Tigger -33 900 813 5 1605 214 103 128 0 chrX 133773906 133773945 -32876351 - MIRc SINE MIR -116 152 109 5 1605 1133 113 0 6 chrX 133774081 133774259 -32876037 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 5 1605 402 185 0 0 chrX 133774259 133774340 -32875956 + CT-rich Low_complexity Low_complexity 3 83 0 5 1605 1101 118 0 0 chrX 133774340 133774509 -32875787 + (TTTC)n Simple_repeat Simple_repeat 1 169 0 5 1605 2013 173 16 48 chrX 133774509 133774848 -32875448 - Lx4B LINE L1 -20 7038 6710 5 1605 2720 151 60 4 chrX 133774848 133775347 -32874949 - RLTR11A2 LTR ERVK 0 527 1 5 1605 2013 173 16 48 chrX 133775347 133775445 -32874851 - Lx4B LINE L1 -349 6709 6615 5 1605 204 236 0 65 chrX 133775530 133775607 -32874689 + A-rich Low_complexity Low_complexity 4 75 0 5 1605 180 0 0 0 chrX 133775621 133775641 -32874655 + (CAACC)n Simple_repeat Simple_repeat 5 24 0 5 1605 402 293 102 0 chrX 133775680 133775837 -32874459 - Lx7 LINE L1 -393 7303 7131 5 1605 248 278 0 0 chrX 133775885 133775939 -32874357 - MER94 DNA AcHobo 0 134 81 5 1605 1487 271 29 44 chrX 133775940 133776462 -32873834 - Lx7 LINE L1 -963 6733 6220 5 1605 477 0 0 0 chrX 133776527 133776580 -32873716 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1605 405 0 0 0 chrX 133776580 133776624 -32873672 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 1605 33 43 0 0 chrX 133776673 133776720 -32873576 + AT_rich Low_complexity Low_complexity 1 47 0 5 1605 337 353 53 121 chrX 133776827 133776904 -32873392 + B3 SINE B2 4 77 -139 5 1605 1262 194 102 102 chrX 133776904 133777288 -32873008 + ORR1C2 LTR MaLR 1 384 0 5 1605 337 270 23 184 chrX 133777288 133777428 -32872868 + B3 SINE B2 78 186 -9 5 1605 24 0 0 0 chrX 133777627 133777651 -32872645 + AT_rich Low_complexity Low_complexity 1 24 0 5 1605 1053 227 30 4 chrX 133777651 133777916 -32872380 - Lx4B LINE L1 -20 7038 6767 5 1605 356 298 149 48 chrX 133777919 133778127 -32872169 - Tigger13a DNA MER2_type -175 596 368 5 1605 864 211 108 0 chrX 133778284 133778478 -32871818 - B3 SINE B2 0 216 2 5 1605 244 380 29 24 chrX 133778515 133778685 -32871611 - Tigger13a DNA MER2_type -564 207 37 5 1605 264 281 22 0 chrX 133778806 133778895 -32871401 - Lx7 LINE L1 -867 6829 6739 5 1605 350 219 48 12 chrX 133778873 133778956 -32871340 + Lx7 LINE L1 6839 6924 -772 5 1605 1540 81 0 55 chrX 133778959 133779195 -32871101 - L1Md_F2 LINE L1 -12 6570 6348 5 1605 1174 228 75 17 chrX 133779307 133779601 -32870695 - ORR1D2 LTR MaLR -59 311 1 5 1605 438 378 26 18 chrX 133779787 133780016 -32870280 + L2a LINE L2 3196 3426 0 6 1605 243 0 0 0 chrX 133780052 133780079 -32870217 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1605 355 314 51 60 chrX 133780132 133780240 -32870056 + MIR SINE MIR 44 154 -122 6 1605 4956 52 2 6 chrX 133780240 133780862 -32869434 + L1Md_F2 LINE L1 5950 6568 -14 6 1605 355 309 50 67 chrX 133780862 133780944 -32869352 + MIR SINE MIR 151 230 -32 6 1605 332 275 0 0 chrX 133781006 133781086 -32869210 - ID4 SINE ID -2 81 2 6 1605 370 298 19 0 chrX 133781091 133781195 -32869101 - PB1D10 SINE Alu -11 106 1 6 1605 792 352 69 32 chrX 133781196 133781630 -32868666 - LTR33A_ LTR ERVL -49 482 33 6 1605 21 0 0 0 chrX 133782212 133782233 -32868063 + AT_rich Low_complexity Low_complexity 1 21 0 6 1605 385 271 10 10 chrX 133782869 133782966 -32867330 + Lx8 LINE L1 6880 6976 -497 6 1605 727 328 16 4 chrX 133783027 133783284 -32867012 + Lx8 LINE L1 6996 7255 -218 6 1605 240 261 59 7 chrX 133783973 133784108 -32866188 - L1ME4a LINE L1 -2 6122 5981 6 1605 1303 224 113 15 chrX 133784285 133784620 -32865676 - ORR1D1 LTR MaLR -5 369 2 6 1605 21 36 0 0 chrX 133785228 133785256 -32865040 + AT_rich Low_complexity Low_complexity 1 28 0 6 1605 202 254 0 17 chrX 133785428 133785488 -32864808 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 6 1605 553 282 58 0 chrX 133785531 133785693 -32864603 - B3 SINE B2 0 198 27 6 1605 210 150 0 0 chrX 133785693 133785733 -32864563 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1605 1181 55 0 7 chrX 133785734 133785881 -32864415 - B1_Mus2 SINE Alu -1 146 1 6 1605 238 162 0 0 chrX 133785882 133785919 -32864377 - B3A SINE B2 -161 37 1 6 1605 1490 314 41 39 chrX 133785988 133786421 -32863875 + L1_Mur3 LINE L1 4675 5108 -772 6 1605 3288 50 2 12 chrX 133786421 133786830 -32863466 + MTB_Mm LTR MaLR 1 405 -2 6 1605 1490 314 41 39 chrX 133786830 133787355 -32862941 + L1_Mur3 LINE L1 5109 5635 -245 6 1605 1437 166 19 42 chrX 133787358 133787622 -32862674 - MTC LTR MaLR -71 348 91 6 1605 201 206 0 31 chrX 133787748 133787813 -32862483 + A-rich Low_complexity Low_complexity 2 64 0 6 1605 2479 255 66 49 chrX 133787821 133788636 -32861660 - Lx7 LINE L1 -333 7363 6535 6 1605 764 278 22 0 chrX 133788843 133789070 -32861226 + L1_Rod LINE L1 5592 5823 -24 6 1605 237 33 0 0 chrX 133789073 133789103 -32861193 + (CAA)n Simple_repeat Simple_repeat 2 31 0 6 1605 307 253 38 81 chrX 133789137 133789322 -32860974 + Lx9 LINE L1 7453 7629 -15 6 1605 1949 205 53 10 chrX 133790798 133791192 -32859104 + MTD LTR MaLR 1 411 -8 6 1605 289 172 11 84 chrX 133791195 133791290 -32859006 + L1MB8 LINE L1 5884 5971 -207 6 1605 3811 80 30 2 chrX 133791480 133792009 -32858287 - L1_Mus3 LINE L1 -8 6630 6087 6 1605 4511 77 115 11 chrX 133792009 133792821 -32857475 + L1_Mus3 LINE L1 5145 6031 -607 6 1605 314 260 13 0 chrX 133792824 133792901 -32857395 - ID_B1 SINE B4 -2 222 145 6 1605 298 321 91 9 chrX 133792901 133792934 -32857362 - B1F SINE Alu -2 147 29 6 1605 628 286 85 45 chrX 133793036 133793237 -32857059 + B4 SINE B4 2 210 -82 6 1605 495 0 0 0 chrX 133793240 133793295 -32857001 + (GA)n Simple_repeat Simple_repeat 1 55 0 6 1605 598 310 54 5 chrX 133793366 133793536 -32856760 + MER2 DNA MER2_type 126 305 -40 6 1605 315 0 0 0 chrX 133793536 133793571 -32856725 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1605 598 310 54 5 chrX 133793571 133793604 -32856692 + MER2 DNA MER2_type 306 339 -6 6 1605 261 255 51 136 chrX 133793636 133793648 -32856648 + MT2A LTR ERVL 1 2 -531 6 1605 466 224 178 31 chrX 133793648 133793777 -32856519 + MTE2b LTR MaLR 4 151 -228 6 1605 575 62 0 12 chrX 133793786 133793867 -32856429 + (TCC)n Simple_repeat Simple_repeat 3 82 0 6 1605 730 192 7 44 chrX 133793867 133794003 -32856293 - B1_Mus1 SINE Alu -10 138 8 6 1605 544 281 102 25 chrX 133794019 133794176 -32856120 + MTE2b LTR MaLR 211 379 0 6 1605 207 270 147 20 chrX 133794278 133794380 -32855916 + MIRb SINE MIR 105 219 -49 6 1605 242 179 54 0 chrX 133794404 133794460 -32855836 + L1MA4 LINE L1 5870 5928 -372 6 1605 573 15 0 0 chrX 133794897 133794963 -32855333 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 1605 844 210 118 0 chrX 133795907 133796093 -32854203 - B3 SINE B2 -8 208 1 6 1605 318 296 82 0 chrX 133797127 133797225 -32853071 - MLT1H2 LTR MaLR -304 185 80 6 1605 4008 172 50 5 chrX 133797360 133798118 -32852178 - Lx3C LINE L1 -6 6970 6179 6 1605 571 199 75 7 chrX 133798252 133798399 -32851897 - Lx7 LINE L1 -1906 5790 5634 6 1605 222 118 0 0 chrX 133798401 133798435 -32851861 + (CATA)n Simple_repeat Simple_repeat 3 36 0 6 1605 398 320 20 32 chrX 133798458 133798710 -32851586 - Lx7 LINE L1 -544 5336 5088 6 1605 2019 146 57 18 chrX 133798733 133799068 -32851228 + Lx4A LINE L1 6711 7058 0 6 1605 747 144 0 0 chrX 133799103 133799228 -32851068 + (GAAA)n Simple_repeat Simple_repeat 1 125 0 6 1605 523 221 18 37 chrX 133799229 133799393 -32850903 - L1_Rod LINE L1 -817 5030 4870 6 1605 2298 250 56 42 chrX 133800997 133801716 -32848580 - Lx8 LINE L1 -341 7132 6404 6 1605 344 302 50 0 chrX 133801819 133801978 -32848318 + (TATG)n Simple_repeat Simple_repeat 4 170 0 6 1605 667 276 7 20 chrX 133802086 133802234 -32848062 - RSINE1 SINE B4 -17 148 3 6 1605 389 313 30 10 chrX 133803421 133803521 -32846775 + PB1D10 SINE Alu 6 107 -10 6 1605 516 32 0 0 chrX 133803521 133803583 -32846713 + (CAA)n Simple_repeat Simple_repeat 2 63 0 6 1605 349 211 42 0 chrX 133803586 133803657 -32846639 + B1_Mur2 SINE Alu 68 141 -8 6 1605 794 172 20 27 chrX 133803756 133803905 -32846391 - B1_Mur4 SINE Alu -1 149 2 6 1605 270 337 52 64 chrX 133803905 133804083 -32846213 + L1M5 LINE L1 3668 3846 -2300 6 1605 3591 39 5 0 chrX 133804083 133804518 -32845778 + L1Md_F2 LINE L1 6144 6580 -2 6 1605 463 293 53 44 chrX 133804518 133804840 -32845456 + L1M5 LINE L1 3839 4162 -1984 6 1605 564 328 33 29 chrX 133804967 133805240 -32845056 + B4A SINE B4 1 274 -18 6 1605 450 0 0 0 chrX 133805654 133805704 -32844592 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1605 387 297 68 0 chrX 133805704 133805852 -32844444 + Lx8 LINE L1 6711 6868 -605 6 1605 429 367 56 25 chrX 133805879 133806041 -32844255 - B4A SINE B4 -113 179 13 6 1605 186 325 26 13 chrX 133806734 133806812 -32843484 + MIR SINE MIR 107 185 -77 6 1605 396 0 0 0 chrX 133806916 133806960 -32843336 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1605 438 36 0 0 chrX 133807071 133807127 -32843169 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 1605 1348 263 15 9 chrX 133807150 133807488 -32842808 - MER58B DNA MER1_type -1 340 1 6 1605 249 316 0 0 chrX 133807504 133807580 -32842716 - 7SK RNA RNA -105 226 151 6 1605 322 328 16 16 chrX 133807858 133807979 -32842317 - L2a LINE L2 -17 3409 3289 6 1605 850 322 19 15 chrX 133808122 133808390 -32841906 - B4A SINE B4 -14 278 10 6 1605 259 379 117 60 chrX 133808443 133809082 -32841214 + L2 LINE L2 2399 3074 -345 6 1605 830 214 332 0 chrX 133809271 133809494 -32840802 - MTD LTR MaLR -122 297 1 6 1605 210 91 0 0 chrX 133809802 133809835 -32840461 + (CAT)n Simple_repeat Simple_repeat 3 35 0 6 1605 423 0 0 0 chrX 133809982 133810029 -32840267 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 6 1605 3700 71 21 16 chrX 133810122 133810639 -32839657 + L1_Mus3 LINE L1 6117 6636 -2 6 1605 831 215 98 4 chrX 133810721 133810955 -32839341 + Lx6 LINE L1 7179 7434 -26 6 1605 21 71 0 0 chrX 133810955 133810997 -32839299 + AT_rich Low_complexity Low_complexity 1 42 0 6 1605 1230 254 237 4 chrX 133811636 133811867 -32838429 - MT2A LTR ERVL -1 532 246 6 1605 2205 83 30 0 chrX 133811867 133812168 -32838128 - L1_Mus1 LINE L1 0 6567 6258 6 1605 212 86 0 28 chrX 133812170 133812206 -32838090 + (CAG)n Simple_repeat Simple_repeat 3 37 0 6 1605 1230 294 84 5 chrX 133812206 133812430 -32837866 - MT2A LTR ERVL -288 245 6 6 1605 202 258 75 15 chrX 133812981 133813048 -32837248 + L2 LINE L2 1465 1535 -1884 6 1605 1239 215 174 70 chrX 133814153 133814694 -32835602 - MT2B LTR ERVL -2 599 3 6 1605 5559 82 11 0 chrX 133814697 133815538 -32834758 + L1VL4 LINE L1 195 1046 -2513 6 1605 335 123 0 34 chrX 133815538 133815597 -32834699 + B1_Mus2 SINE Alu 3 59 -88 6 1605 794 57 9 0 chrX 133815685 133815790 -32834506 + B1_Mus2 SINE Alu 42 147 0 6 1605 284 0 28 0 chrX 133815806 133815842 -32834454 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 6 1605 9788 77 13 3 chrX 133815842 133817315 -32832981 + L1VL4 LINE L1 1039 2527 -1032 6 1605 1297 232 88 34 chrX 133817346 133817699 -32832597 + ORR1D1 LTR MaLR 3 374 0 6 1605 369 0 0 0 chrX 133817731 133817772 -32832524 + (CAA)n Simple_repeat Simple_repeat 2 42 0 6 1605 184 380 120 0 chrX 133818313 133818421 -32831875 - MIRb SINE MIR -40 228 108 6 1605 404 344 151 17 chrX 133818509 133818974 -32831322 - L2 LINE L2 -1019 2400 1874 6 1605 306 254 208 47 chrX 133819987 133820136 -32830160 - MER5B DNA MER1_type 0 178 6 6 1605 3439 106 37 4 chrX 133820309 133820820 -32829476 - Lx2A LINE L1 0 7008 6481 6 1605 475 391 72 36 chrX 133823536 133824184 -32826112 - L2a LINE L2 -121 3305 2634 6 1605 384 22 0 0 chrX 133824188 133824233 -32826063 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 200 9184 89 14 1 chrX 133824238 133826331 -32823965 - L1_Mus1 LINE L1 -1 6566 4444 6 1606 8589 5 0 0 chrX 133826321 133827616 -32822680 - L1Md_A LINE L1 0 6582 5288 6 1606 37422 8 0 1 chrX 133827678 133832856 -32817440 - L1Md_T LINE L1 0 6582 1408 6 1606 23583 126 25 64 chrX 133832850 133839475 -32810821 - L1Md_T LINE L1 0 6582 232 6 1606 298 286 0 28 chrX 133839803 133839875 -32810421 + B3 SINE B2 70 139 -77 6 1606 189 0 0 0 chrX 133839880 133839901 -32810395 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 1606 325 182 39 48 chrX 133839906 133840010 -32810286 - Lx9 LINE L1 -135 7509 7407 6 1606 276 149 0 0 chrX 133840012 133840059 -32810237 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1606 7666 46 4 1 chrX 133840079 133841520 -32808776 - L1Md_F2 LINE L1 -11 6571 5129 7 1606 460 258 7 99 chrX 133841638 133841688 -32808608 - B3A SINE B2 0 198 161 7 1606 620 59 67 0 chrX 133841688 133841807 -32808489 + (TCTG)n Simple_repeat Simple_repeat 2 128 0 7 1606 460 258 7 99 chrX 133841807 133841898 -32808398 - B3A SINE B2 -38 160 70 7 1606 363 295 90 0 chrX 133841898 133842054 -32808242 - L1M2 LINE L1 -3864 2981 2812 7 1606 516 288 44 5 chrX 133842478 133842731 -32807565 - L1M2 LINE L1 -4220 2629 2169 7 1606 1331 251 60 24 chrX 133842949 133843283 -32807013 - MTEa LTR MaLR -33 346 1 7 1606 333 300 77 10 chrX 133843409 133843719 -32806577 - L1M2 LINE L1 -4187 1661 1331 7 1606 803 150 21 7 chrX 133843747 133843888 -32806408 - B1_Mur3 SINE Alu -6 143 1 7 1606 454 307 80 0 chrX 133844898 133845035 -32805261 - MER2 DNA MER2_type -195 150 3 7 1606 299 296 10 0 chrX 133845781 133845879 -32804417 + L1MA4 LINE L1 5838 5936 -364 7 1606 1107 259 75 11 chrX 133846055 133846320 -32803976 + B4 SINE B4 11 292 0 7 1606 433 305 93 24 chrX 133846865 133847070 -32803226 - MIR SINE MIR -29 233 15 7 1606 405 0 0 0 chrX 133847592 133847637 -32802659 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1606 414 266 124 8 chrX 133848071 133848200 -32802096 + B1F SINE Alu 6 149 0 7 1606 601 301 42 12 chrX 133848203 133848368 -32801928 + B3 SINE B2 47 216 0 7 1606 192 77 0 0 chrX 133848385 133848411 -32801885 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 7 1606 216 258 182 0 chrX 133848468 133848534 -32801762 + ID4 SINE ID 4 81 -2 7 1606 381 333 29 7 chrX 133849111 133849247 -32801049 - MIR SINE MIR -123 139 1 7 1606 20819 77 9 8 chrX 133849759 133853444 -32796852 + L1Md_A LINE L1 422 4109 -1774 7 1606 5474 53 76 76 chrX 133853446 133853929 -32796367 - L1_Mm LINE L1 -468 5415 4895 7 1606 227 191 44 73 chrX 133853929 133853997 -32796299 + RMER20A LTR ERVK 186 251 -265 7 1606 5474 53 76 76 chrX 133853997 133854346 -32795950 - L1_Mm LINE L1 -468 4894 4516 7 1606 528 295 49 29 chrX 133854369 133854718 -32795578 - L1M5 LINE L1 -2336 3810 3455 7 1606 341 368 70 13 chrX 133854724 133854881 -32795415 - LTR16A LTR ERVL -283 168 3 7 1606 2429 30 10 10 chrX 133854987 133855289 -32795007 - L1Md_F3 LINE L1 -3 6581 6280 7 1606 470 246 138 27 chrX 133855320 133855508 -32794788 - B3 SINE B2 -6 210 2 7 1606 1259 126 11 0 chrX 133855510 133855700 -32794596 - B2_Mm1t SINE B2 0 193 2 7 1606 342 283 69 29 chrX 133856348 133856450 -32793846 + PB1D10 SINE Alu 6 111 -6 7 1606 269 388 52 13 chrX 133857004 133857158 -32793138 + MIR SINE MIR 20 179 -83 7 1606 183 349 35 24 chrX 133858629 133858714 -32791582 + L2c LINE L2 3268 3353 -34 7 1606 543 203 178 5 chrX 133859961 133860169 -32790127 + Lx9 LINE L1 7398 7641 -3 7 1606 244 273 158 129 chrX 133860516 133860617 -32789679 + PB1D10 SINE Alu 13 116 -1 7 1606 802 292 52 13 chrX 133861438 133861600 -32788696 + ORR1D2 LTR MaLR 1 163 -207 7 1606 360 0 0 0 chrX 133861600 133861640 -32788656 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 7 1606 802 307 90 25 chrX 133861640 133861807 -32788489 + ORR1D2 LTR MaLR 164 356 -3 7 1606 614 58 11 0 chrX 133861816 133861903 -32788393 + (CA)n Simple_repeat Simple_repeat 1 88 0 7 1606 333 371 64 29 chrX 133861974 133862146 -32788150 - L1MEd LINE L1 -5492 627 450 7 1606 291 161 0 0 chrX 133862321 133862377 -32787919 + (TATAG)n Simple_repeat Simple_repeat 2 57 0 7 1606 794 159 200 49 chrX 133862593 133862778 -32787518 + B3 SINE B2 1 213 -3 7 1606 195 316 0 0 chrX 133864085 133864142 -32786154 + L2 LINE L2 1957 2013 -1406 7 1606 2375 322 40 42 chrX 133865395 133865972 -32784324 - Lx9 LINE L1 -157 7487 6934 7 1606 639 0 0 0 chrX 133865972 133866043 -32784253 + (GAA)n Simple_repeat Simple_repeat 3 73 0 7 1606 2375 304 44 40 chrX 133866043 133867284 -32783012 - Lx9 LINE L1 -711 6933 5498 7 1606 2199 191 17 60 chrX 133867289 133867606 -32782690 + RMER6B LTR ERVK 3 307 -154 7 1606 2017 44 16 4 chrX 133867606 133867859 -32782437 + L1Md_F3 LINE L1 6329 6584 0 7 1606 2199 191 17 60 chrX 133867859 133868010 -32782286 + RMER6B LTR ERVK 308 451 -10 7 1606 396 0 0 0 chrX 133868010 133868054 -32782242 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1606 819 192 141 5 chrX 133868058 133868257 -32782039 - Lx9 LINE L1 -349 5498 5273 7 1606 387 0 0 0 chrX 133868781 133868824 -32781472 + (TC)n Simple_repeat Simple_repeat 2 44 0 7 1606 424 189 18 26 chrX 133868925 133869039 -32781257 + L1_Mus3 LINE L1 709 821 -5795 7 1606 20348 113 8 3 chrX 133869108 133873165 -32777131 + L1_Mus3 LINE L1 2554 6631 -7 7 1606 301 316 0 0 chrX 133873481 133873560 -32776736 + ID4_ SINE ID 3 81 -2 7 1606 187 224 88 15 chrX 133873644 133873712 -32776584 - MIR SINE MIR -56 206 134 7 1606 2317 127 22 17 chrX 133873906 133874267 -32776029 - ORR1B2 LTR MaLR 0 367 5 7 1606 323 369 58 61 chrX 133875097 133875443 -32774853 + L2c LINE L2 3041 3385 -2 7 1606 452 336 54 22 chrX 133875475 133875697 -32774599 + MIR SINE MIR 31 259 -3 7 1606 492 333 75 0 chrX 133876523 133876724 -32773572 + MIRb SINE MIR 38 253 -15 7 1606 291 213 0 16 chrX 133876834 133876896 -32773400 + Lx8 LINE L1 6916 6976 -497 7 1606 334 287 19 29 chrX 133876900 133877004 -32773292 - MIR SINE MIR -93 169 67 7 1606 450 0 0 0 chrX 133877336 133877386 -32772910 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 1606 1303 224 210 52 chrX 133877386 133877866 -32772430 + RMER2 LTR ERV1 12 567 0 7 1606 21 0 0 0 chrX 133877900 133877921 -32772375 + AT_rich Low_complexity Low_complexity 1 21 0 7 1606 348 261 126 0 chrX 133878076 133878187 -32772109 - Lx7 LINE L1 -181 7292 7168 7 1606 490 87 0 0 chrX 133878183 133878252 -32772044 - L1_Mus3 LINE L1 -322 6316 6248 7 1606 606 326 62 24 chrX 133878291 133878480 -32771816 - Lx7 LINE L1 -321 7152 6938 7 1606 288 53 0 0 chrX 133878480 133878518 -32771778 + (TGG)n Simple_repeat Simple_repeat 1 38 0 7 1606 606 324 64 25 chrX 133878518 133878679 -32771617 - Lx7 LINE L1 -522 6951 6793 7 1606 417 325 0 24 chrX 133878866 133878992 -32771304 - B4 SINE B4 0 292 170 7 1606 612 282 0 0 chrX 133879016 133879165 -32771131 + Charlie1 DNA MER1_type 79 227 -2554 7 1606 2844 205 18 21 chrX 133879278 133879846 -32770450 - Lx5 LINE L1 -8 7042 6477 7 1606 196 357 31 8 chrX 133879953 133880061 -32770235 + MIR SINE MIR 150 258 -10 7 1606 1169 116 5 35 chrX 133880075 133880272 -32770024 + B2_Mm2 SINE B2 1 191 -4 7 1606 1231 274 123 3 chrX 133880376 133880742 -32769554 + MTD LTR MaLR 8 417 -2 7 1606 347 330 43 67 chrX 133881128 133881336 -32768960 + MIRc SINE MIR 49 251 -17 7 1606 182 359 136 40 chrX 133881913 133882090 -32768206 + MIRb SINE MIR 67 260 -8 7 1606 37 39 0 0 chrX 133882965 133883016 -32767280 + AT_rich Low_complexity Low_complexity 1 51 0 7 1606 243 311 154 10 chrX 133883062 133883166 -32767130 - MIR SINE MIR -108 154 36 7 1606 593 260 86 23 chrX 133886455 133886504 -32763792 - MER58B DNA MER1_type 0 341 294 7 1606 991 136 15 61 chrX 133886504 133886700 -32763596 + B2_Mm2 SINE B2 2 188 -7 7 1606 593 260 86 23 chrX 133886700 133886845 -32763451 - MER58B DNA MER1_type -48 293 130 7 1606 2520 44 85 0 chrX 133886845 133887164 -32763132 - ORR1A1 LTR MaLR 0 346 1 7 1606 13159 71 14 3 chrX 133887164 133888938 -32761358 - ORR1A1-int LTR MaLR 0 1792 1 7 1606 2529 44 85 0 chrX 133888938 133889257 -32761039 - ORR1A1 LTR MaLR 0 346 1 7 1606 277 350 27 62 chrX 133889369 133889515 -32760781 - MER5B DNA MER1_type -14 164 24 7 1606 348 103 0 0 chrX 133889755 133889813 -32760483 + (TCTCTG)n Simple_repeat Simple_repeat 4 61 0 7 1606 341 176 0 0 chrX 133890451 133890502 -32759794 + RSINE1 SINE B4 74 124 -41 7 1606 256 318 31 75 chrX 133890964 133891124 -32759172 + MIRb SINE MIR 52 204 -64 7 1606 299 270 14 0 chrX 133892014 133892088 -32758208 + MER3 DNA MER1_type 28 102 -107 7 1606 1184 268 42 38 chrX 133892137 133892547 -32757749 + MTE2a LTR MaLR 3 419 0 7 1606 307 338 86 25 chrX 133894203 133894420 -32755876 - MIRb SINE MIR -17 251 21 7 1606 736 228 91 10 chrX 133894920 133895119 -32755177 + MIR SINE MIR 48 262 0 7 1606 268 315 118 34 chrX 133895883 133896020 -32754276 - MIR SINE MIR -55 153 1 7 1606 1189 276 41 18 chrX 133896534 133896861 -32753435 - ORR1E LTR MaLR 0 384 27 7 1606 3118 71 2 0 chrX 133896874 133897269 -32753027 - MTA_Mm LTR MaLR 0 396 1 7 1606 1179 257 61 55 chrX 133897379 133897708 -32752588 - MTE2b LTR MaLR -48 331 1 7 1606 187 313 30 129 chrX 133897741 133897873 -32752423 + L2a LINE L2 3293 3411 -15 7 1606 385 267 81 47 chrX 133898360 133898596 -32751700 + L1MB7 LINE L1 4614 4857 -1289 7 1606 858 231 55 5 chrX 133898636 133898836 -32751460 - B3 SINE B2 -6 210 1 7 1606 40 37 0 0 chrX 133898842 133898896 -32751400 + AT_rich Low_complexity Low_complexity 1 54 0 7 1606 4264 178 72 68 chrX 133898948 133899846 -32750450 - RMER19B LTR ERVK 0 902 1 7 1606 2092 186 47 9 chrX 133899846 133900269 -32750027 - Lx2B LINE L1 -82 6918 6480 7 1606 502 328 0 0 chrX 133900272 133900400 -32749896 - ID_B1 SINE B4 -11 213 86 7 1606 489 279 6 12 chrX 133900425 133900592 -32749704 + L1MB7 LINE L1 4869 5034 -1112 7 1606 262 323 0 30 chrX 133900770 133900869 -32749427 + (CAGAGA)n Simple_repeat Simple_repeat 3 98 0 7 1606 386 242 121 0 chrX 133900869 133900960 -32749336 + B1_Mur1 SINE Alu 42 143 -6 7 1606 1159 302 45 27 chrX 133901071 133901723 -32748573 + L1MB7 LINE L1 5312 5980 -200 7 1606 22 0 0 0 chrX 133901818 133901840 -32748456 + AT_rich Low_complexity Low_complexity 1 22 0 7 1606 524 239 7 7 chrX 133901947 133902086 -32748210 + L1MB7 LINE L1 6028 6166 -12 7 1606 438 20 0 0 chrX 133902128 133902179 -32748117 + (TTA)n Simple_repeat Simple_repeat 3 53 0 7 1606 414 0 0 0 chrX 133903585 133903631 -32746665 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1606 355 328 0 48 chrX 133903677 133903802 -32746494 - B1_Mus1 SINE Alu -12 136 18 7 1606 350 341 0 75 chrX 133903802 133903823 -32746473 - ID_B1 SINE B4 -12 212 78 7 1606 14041 119 8 26 chrX 133904321 133906093 -32744203 + L1_Mus4 LINE L1 3549 5335 -548 7 1606 3256 43 8 0 chrX 133906093 133906486 -32743810 + MTA_Mm LTR MaLR 1 396 0 7 1606 14041 127 59 43 chrX 133906486 133907638 -32742658 + L1_Mus4 LINE L1 5336 6531 -105 7 1606 2038 68 7 7 chrX 133907621 133907902 -32742394 + L1_Mus1 LINE L1 6284 6564 -3 7 1606 634 65 28 0 chrX 133907914 133908045 -32742251 + L1_Mus3 LINE L1 6517 6638 0 7 1606 4886 139 43 7 chrX 133908045 133908974 -32741322 + MusHAL1 LINE L1 1007 1969 -743 8 1606 1409 212 189 12 chrX 133908974 133909317 -32740979 - RMER13B LTR ERVK -144 764 361 8 1606 5688 83 20 1 chrX 133909319 133910182 -32740114 - MusHAL1 LINE L1 -1132 1580 702 8 1606 1124 52 0 0 chrX 133910179 133910333 -32739963 + MusHAL1 LINE L1 1616 1769 -943 8 1606 660 60 0 0 chrX 133910332 133910416 -32739880 + L1_Mus4 LINE L1 5602 5685 -951 8 1606 25 0 0 0 chrX 133910416 133910441 -32739855 + AT_rich Low_complexity Low_complexity 1 25 0 8 1606 8090 28 0 0 chrX 133910441 133911537 -32738759 - L1Md_T LINE L1 0 6582 5487 8 1606 5950 131 31 1 chrX 133911536 133912490 -32737806 + Lx LINE L1 5670 6652 -2 8 1606 240 35 0 0 chrX 133912500 133912529 -32737767 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 8 1606 2160 183 17 34 chrX 133912529 133912942 -32737354 - RMER13B LTR ERVK -502 406 1 8 1606 4692 135 57 2 chrX 133912942 133913805 -32736491 + L1_Mur2 LINE L1 3560 4469 -1408 8 1606 871 306 72 26 chrX 133913838 133914089 -32736207 - L1M2 LINE L1 -1745 4398 4148 8 1606 1057 88 0 13 chrX 133914089 133914238 -32736058 - B1_Mm SINE Alu 0 147 1 8 1606 871 306 72 26 chrX 133914238 133914557 -32735739 - L1M2 LINE L1 -1996 4147 3803 8 1606 315 113 28 14 chrX 133914849 133914921 -32735375 + (TA)n Simple_repeat Simple_repeat 2 74 0 8 1606 738 212 18 18 chrX 133914921 133915089 -32735207 - MT2A LTR ERVL -55 478 311 8 1606 354 222 14 0 chrX 133915082 133915154 -32735142 - MT2A LTR ERVL -367 166 94 8 1606 5448 178 23 19 chrX 133915165 133916565 -32733731 - Lx4B LINE L1 -311 6747 5325 8 1606 324 309 121 27 chrX 133916678 133916879 -32733417 + MLT2B1 LTR ERVL 8 225 -295 8 1606 512 316 81 12 chrX 133916918 133917091 -32733205 + MLT2B1 LTR ERVL 345 529 -38 8 1606 347 276 49 49 chrX 133917374 133917496 -32732800 + MER20 DNA MER1_type 97 218 -1 8 1606 260 279 123 0 chrX 133917554 133917676 -32732620 + Charlie16a DNA MER1_type 65 201 -141 8 1606 746 318 16 49 chrX 133918015 133918382 -32731914 + Lx7 LINE L1 6946 7300 -396 8 1606 275 187 21 21 chrX 133918468 133918561 -32731735 - Lx9 LINE L1 -20 7624 7532 8 1606 2443 108 27 3 chrX 133918632 133918884 -32731412 - L1_Mus3 LINE L1 0 6638 6386 8 1606 318 26 0 0 chrX 133918884 133918923 -32731373 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 1606 2443 108 27 3 chrX 133918923 133919041 -32731255 - L1_Mus3 LINE L1 -253 6385 6260 8 1606 766 235 22 0 chrX 133919110 133919293 -32731003 + Lx9 LINE L1 7206 7392 -252 8 1606 43 0 0 0 chrX 133919293 133919336 -32730960 + AT_rich Low_complexity Low_complexity 1 43 0 8 1606 33966 67 2 4 chrX 133919338 133925295 -32725001 - L1Md_F3 LINE L1 -14 6570 631 8 1606 4457 164 63 32 chrX 133925409 133926337 -32723959 - RMER17B LTR ERVK -10 948 1 8 1606 493 234 21 7 chrX 133926340 133926482 -32723814 - L1MB3 LINE L1 -21 6162 6019 8 1606 9064 208 32 38 chrX 133926485 133926635 -32723661 - Lx7 LINE L1 0 7696 7546 8 1606 1099 88 0 7 chrX 133926635 133926783 -32723513 + B1_Mus2 SINE Alu 1 147 0 8 1606 9064 204 27 29 chrX 133926783 133929045 -32721251 - Lx7 LINE L1 -151 7545 5289 8 1606 925 273 36 3 chrX 133929046 133929380 -32720916 - L1MB3 LINE L1 -245 5938 5594 8 1606 353 258 23 16 chrX 133929398 133929602 -32720694 - L1M4 LINE L1 -955 5489 5281 8 1606 279 314 102 28 chrX 133930680 133930857 -32719439 + MER115 DNA Tip100 496 685 -8 8 1606 277 342 26 9 chrX 133931031 133931146 -32719150 + MIR SINE MIR 25 141 -121 8 1606 297 0 0 0 chrX 133931446 133931479 -32718817 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 8 1606 6232 68 11 7 chrX 133932017 133932837 -32717459 + L1Md_F2 LINE L1 5744 6566 -16 8 1606 1938 85 46 0 chrX 133934357 133934664 -32715632 + Lx LINE L1 5654 5974 -680 8 1606 2084 111 3 67 chrX 133934664 133935022 -32715274 + IAPLTR1a_Mm LTR ERVK 1 335 -2 8 1606 3313 69 6 54 chrX 133935022 133935791 -32714505 + IAPEz-int LTR ERVK 9 662 -5819 8 1606 416 57 0 0 chrX 133935791 133935844 -32714452 + IAPEz-int LTR ERVK 1359 1411 -5070 8 1606 1716 119 4 4 chrX 133935843 133936105 -32714191 + IAPEz-int LTR ERVK 2236 2497 -5183 8 1606 886 73 24 0 chrX 133936102 133936225 -32714071 + IAPEz-int LTR ERVK 4785 4910 -2770 8 1606 25327 11 2 0 chrX 133936225 133939161 -32711135 + IAPEz-int LTR ERVK 3525 6466 -15 8 1606 4142 120 11 6 chrX 133939161 133939176 -32711120 + Lx LINE L1 5956 5969 -685 8 1606 2124 104 3 67 chrX 133939176 133939535 -32710761 + IAPLTR1a_Mm LTR ERVK 1 336 -1 8 1606 4142 120 11 6 chrX 133939535 133940166 -32710130 + Lx LINE L1 5970 6604 -50 8 1606 453 163 6 111 chrX 133940516 133940616 -32709680 - RMER17C LTR ERVK -140 270 187 8 1606 990 87 0 0 chrX 133940616 133940754 -32709542 + (GAA)n Simple_repeat Simple_repeat 3 140 0 8 1606 453 163 6 111 chrX 133940754 133940825 -32709471 - RMER17C LTR ERVK -224 186 117 8 1606 1570 186 7 17 chrX 133940849 133941150 -32709146 - RLTR10E LTR ERVK -13 298 1 8 1606 381 317 47 29 chrX 133941190 133941362 -32708934 - MIR SINE MIR -42 220 46 8 1606 233 353 87 31 chrX 133942085 133942246 -32708050 - MIR SINE MIR -29 233 64 8 1606 191 356 135 45 chrX 133942465 133942753 -32707543 - L2 LINE L2 -1968 1451 1138 8 1606 2757 174 92 35 chrX 133942864 133943140 -32707156 - RMER6C LTR ERVK -2 688 367 8 1606 342 0 0 0 chrX 133943140 133943178 -32707118 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 1606 2757 174 92 35 chrX 133943178 133943552 -32706744 - RMER6C LTR ERVK -324 366 1 8 1606 459 337 140 29 chrX 133943701 133944043 -32706253 - L2 LINE L2 -2561 858 479 8 1606 315 0 0 0 chrX 133944128 133944163 -32706133 + (TG)n Simple_repeat Simple_repeat 1 35 0 8 1606 198 0 0 0 chrX 133944506 133944528 -32705768 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1606 787 215 73 87 chrX 133944971 133944994 -32705302 - B3 SINE B2 0 216 199 8 1606 1883 175 45 6 chrX 133944994 133945350 -32704946 - ORR1D1 LTR MaLR -4 370 1 8 1606 787 215 73 87 chrX 133945350 133945385 -32704911 - B3 SINE B2 -18 198 152 8 1606 444 82 0 0 chrX 133945385 133945446 -32704850 + (CATA)n Simple_repeat Simple_repeat 3 63 0 8 1606 787 215 73 87 chrX 133945446 133945605 -32704691 - B3 SINE B2 -65 151 2 8 1606 185 332 12 19 chrX 133946367 133946461 -32703835 - L2a LINE L2 -207 3180 3086 8 1606 31673 77 1 15 chrX 133946469 133951737 -32698559 + L1Md_F2 LINE L1 406 5585 -298 8 1606 8130 46 1 2 chrX 133951738 133952735 -32697561 + L1Md_F2 LINE L1 5587 6582 0 8 1606 6890 69 1 0 chrX 133952735 133953672 -32696624 + L1Md_F2 LINE L1 4649 5586 -297 8 1606 7891 52 6 2 chrX 133953672 133954664 -32695632 + L1Md_F2 LINE L1 5587 6582 0 8 1606 3042 33 0 6 chrX 133954836 133955201 -32695095 + L1Md_F2 LINE L1 6216 6578 -4 8 200 400 367 74 55 chrX 133955403 133955674 -32694622 - B4A SINE B4 -13 279 4 8 1607 1224 101 0 0 chrX 133955801 133955979 -32694317 + (TTTCC)n Simple_repeat Simple_repeat 3 180 0 8 1607 245 239 209 0 chrX 133956119 133956186 -32694110 - ID4 SINE ID -2 81 1 8 1607 1269 75 81 0 chrX 133956975 133957161 -32693135 - L1_Mus2 LINE L1 0 6566 6366 8 1607 1204 82 0 0 chrX 133957161 133957331 -32692965 - L1_Mm LINE L1 -820 5063 4894 8 1607 486 266 87 121 chrX 133957553 133957784 -32692512 - B4A SINE B4 -68 224 2 8 1607 283 293 103 6 chrX 133958037 133958208 -32692088 - L1MEg LINE L1 -4649 2295 2135 8 1607 423 0 0 0 chrX 133960638 133960685 -32689611 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1607 33796 35 1 0 chrX 133961272 133967125 -32683171 + L1Md_T LINE L1 1 5589 -297 8 1607 9002 6 0 0 chrX 133967125 133968121 -32682175 + L1Md_T LINE L1 5590 6585 0 8 1607 269 238 157 28 chrX 133968814 133968922 -32681374 + MIR SINE MIR 31 152 -110 8 1607 414 0 0 0 chrX 133969691 133969737 -32680559 + (TC)n Simple_repeat Simple_repeat 2 47 0 8 1607 279 0 0 0 chrX 133969737 133969767 -32680529 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 1607 710 286 8 74 chrX 133969842 133970084 -32680212 - B4A SINE B4 -66 226 1 8 1607 657 336 128 8 chrX 133970085 133970451 -32679845 + MLT1J1 LTR MaLR 28 437 -7 8 1607 506 223 16 16 chrX 133971472 133971595 -32678701 + B3 SINE B2 94 216 0 8 1607 24 24 0 24 chrX 133972433 133972453 -32677843 + AT_rich Low_complexity Low_complexity 1 20 0 8 1607 365 221 15 0 chrX 133972453 133972521 -32677775 + ID4_ SINE ID 5 73 -10 8 1607 24 24 0 24 chrX 133972521 133972542 -32677754 + AT_rich Low_complexity Low_complexity 1 21 0 8 1607 22 0 0 0 chrX 133972601 133972623 -32677673 + AT_rich Low_complexity Low_complexity 1 22 0 8 1607 669 193 12 81 chrX 133974135 133974394 -32675902 - Lx9 LINE L1 0 7644 7404 8 1607 3231 263 68 32 chrX 133974394 133975731 -32674565 - Lx9 LINE L1 -418 7226 5745 8 1607 25 0 0 0 chrX 133975915 133975940 -32674356 + AT_rich Low_complexity Low_complexity 1 25 0 8 1607 327 340 59 11 chrX 133975951 133976138 -32674158 - MIR SINE MIR 0 262 67 8 1607 22 0 0 0 chrX 133977715 133977737 -32672559 + AT_rich Low_complexity Low_complexity 1 22 0 8 1607 807 283 52 52 chrX 133978013 133978319 -32671977 - Lx6 LINE L1 -78 7382 7077 8 1607 187 325 50 93 chrX 133978960 133979099 -32671197 + L2c LINE L2 3239 3371 -16 8 1607 264 322 136 71 chrX 133979522 133979676 -32670620 + RSINE1 SINE B4 2 165 0 8 1607 459 92 0 0 chrX 133980956 133981021 -32669275 + (TG)n Simple_repeat Simple_repeat 2 66 0 8 1607 585 305 79 21 chrX 133981084 133981325 -32668971 + MIR SINE MIR 5 259 -3 8 1607 454 268 152 21 chrX 133981502 133981647 -32668649 + ID_B1 SINE B4 54 217 -7 8 1607 602 247 40 31 chrX 133981844 133982001 -32668295 + ID_B1 SINE B4 83 246 -46 8 1607 238 390 0 0 chrX 133982087 133982187 -32668109 + L3 LINE CR1 4233 4332 -157 8 1607 538 320 75 0 chrX 133982513 133982713 -32667583 + ID_B1 SINE B4 2 216 -8 8 1607 420 314 106 70 chrX 133982747 133983076 -32667220 - Charlie18a DNA MER1_type 0 342 2 8 1607 396 88 0 0 chrX 133984179 133984236 -32666060 + (CCA)n Simple_repeat Simple_repeat 3 59 0 8 1607 6952 93 22 3 chrX 133984421 133985655 -32664641 - L1_Mus3 LINE L1 -7 6631 5375 8 1607 1272 141 4 31 chrX 133985654 133985910 -32664386 + L1_Mur2 LINE L1 5109 5357 -520 8 1607 4077 45 4 6 chrX 133985914 133986427 -32663869 - L1Md_F2 LINE L1 0 6582 6071 8 1607 180 269 181 23 chrX 133986505 133986638 -32663658 - L2a LINE L2 -75 3351 3198 8 1607 296 277 245 45 chrX 133986909 133987064 -32663232 - RMER15 LTR ERVL -91 484 299 8 1607 223 355 9 9 chrX 133989404 133989512 -32660784 + L3 LINE CR1 4229 4336 -153 8 1607 431 277 70 37 chrX 133989911 133990125 -32660171 - L1MA4 LINE L1 -371 5929 5709 8 1607 503 318 0 0 chrX 133990230 133990340 -32659956 + PB1D10 SINE Alu 1 110 -7 8 1607 240 349 0 0 chrX 133990344 133990410 -32659886 + ID4 SINE ID 2 67 -16 8 1607 338 258 48 16 chrX 133990412 133990538 -32659758 + HAL1-2a_MD LINE L1 2372 2501 -523 8 1607 621 288 109 8 chrX 133990697 133991065 -32659231 - L1MD2 LINE L1 -218 6141 5737 8 1607 583 120 218 18 chrX 133991065 133991175 -32659121 - B1_Mus2 SINE Alu 0 147 16 8 1607 2188 191 104 38 chrX 133991179 133991681 -32658615 + RMER2 LTR ERV1 1 535 -32 9 1607 189 0 0 0 chrX 133991697 133991718 -32658578 + (GGGTG)n Simple_repeat Simple_repeat 5 25 0 9 1607 851 247 77 0 chrX 133991785 133991967 -32658329 - B3 SINE B2 -8 208 13 9 1607 423 0 0 0 chrX 133992389 133992436 -32657860 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 1607 690 288 97 97 chrX 133992466 133992754 -32657542 - B4 SINE B4 -4 288 1 9 1607 307 302 49 21 chrX 133992756 133992898 -32657398 - L1MD2 LINE L1 -551 5691 5546 8 1607 334 306 231 0 chrX 133992950 133993110 -32657186 - MIRb SINE MIR -47 221 25 9 1607 1050 91 28 0 chrX 133993128 133993271 -32657025 - B1_Mus2 SINE Alu 0 147 1 9 1607 367 359 71 35 chrX 133993532 133993786 -32656510 + MIRc SINE MIR 5 267 -1 9 1607 268 358 134 38 chrX 133994853 133995062 -32655234 - LTR81B LTR ERV1? -922 471 243 9 1607 231 217 0 0 chrX 133995077 133995137 -32655159 + CT-rich Low_complexity Low_complexity 2 61 0 9 1607 556 292 78 49 chrX 133995207 133995412 -32654884 - B4A SINE B4 -80 212 2 9 1607 288 389 28 7 chrX 133995902 133996047 -32654249 + MIR SINE MIR 14 161 -101 9 1607 21 95 0 0 chrX 133997970 133998033 -32652263 + AT_rich Low_complexity Low_complexity 1 63 0 9 1607 498 33 0 0 chrX 133998037 133998097 -32652199 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 9 1607 708 231 37 27 chrX 133998829 133999016 -32651280 + MER5A DNA MER1_type 1 189 0 9 1607 195 364 0 43 chrX 133999438 133999507 -32650789 + L3 LINE CR1 2943 3008 -1481 9 1607 420 0 0 0 chrX 133999952 134000000 -32650296 + L1Md_T LINE L1 6179 6226 -356 9 1607 2471 48 0 79 chrX 134000002 134000382 -32649914 + L1Md_A LINE L1 6229 6578 -4 1 1607 1460 35 15 15 chrX 134000382 134000583 -32649713 + L1Md_F2 LINE L1 6382 6582 0 2 1607 181 324 113 33 chrX 134001157 134001307 -32648989 + MIRc SINE MIR 17 178 -90 3 1607 273 109 0 0 chrX 134001390 134001436 -32648860 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1607 377 292 165 8 chrX 134001437 134001558 -32648738 - B3 SINE B2 -69 147 8 5 1607 187 286 18 117 chrX 134001877 134001988 -32648308 + MIRc SINE MIR 107 206 -62 6 1607 2455 140 0 0 chrX 134001993 134002400 -32647896 - L1_Mus3 LINE L1 -445 5438 5032 7 1607 7504 81 3 3 chrX 134002397 134003588 -32646708 + L1_Mus3 LINE L1 5441 6632 -6 7 1607 226 263 39 13 chrX 134003743 134003820 -32646476 - MLT1J1 LTR MaLR -299 145 67 8 1607 467 244 92 38 chrX 134003946 134004160 -32646136 - L1MEf LINE L1 -4560 1640 1425 9 1607 272 324 147 7 chrX 134004169 134004312 -32645984 + MER20B DNA MER1_type 432 594 -189 1 1607 3982 62 8 4 chrX 134004689 134005194 -32645102 - L1Md_F2 LINE L1 -2 6580 6074 1 1607 273 222 0 0 chrX 134005370 134005433 -32644863 - MLT1F2 LTR MaLR -3 557 495 1 1607 1571 261 26 50 chrX 134005435 134005931 -32644365 + Lx7 LINE L1 6831 7314 -382 1 1607 423 38 0 0 chrX 134005931 134005984 -32644312 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1607 213 236 14 14 chrX 134005992 134006065 -32644231 + T-rich Low_complexity Low_complexity 2 74 0 1 1607 21 0 0 0 chrX 134006493 134006514 -32643782 + AT_rich Low_complexity Low_complexity 1 21 0 1 1607 1043 90 0 20 chrX 134006515 134006663 -32643633 + B1_Mus1 SINE Alu 4 148 0 1 1607 2324 272 127 29 chrX 134006699 134007603 -32642693 - Lx9 LINE L1 -20 7624 6632 1 1607 789 158 0 0 chrX 134008954 134009093 -32641203 + GA-rich Low_complexity Low_complexity 1 139 0 1 1607 275 361 37 49 chrX 134009224 134009387 -32640909 - L2c LINE L2 -204 3183 3023 2 1607 277 314 16 31 chrX 134009625 134009753 -32640543 + L2a LINE L2 3261 3386 -40 2 1607 397 300 25 38 chrX 134009812 134010051 -32640245 - L1MA10 LINE L1 -59 6275 6040 2 1607 490 316 36 84 chrX 134011441 134011761 -32638535 - MLT1A LTR MaLR -1 407 91 2 1607 2680 89 45 10 chrX 134011761 134012158 -32638138 - RLTR10A LTR ERVK 0 411 1 2 1607 261 301 65 124 chrX 134012158 134012256 -32638040 - MLT1A LTR MaLR -318 90 2 2 1607 229 333 22 0 chrX 134012380 134012470 -32637826 - MTD LTR MaLR 0 359 268 2 1607 522 0 0 0 chrX 134012639 134012697 -32637599 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 2 1607 2565 95 0 26 chrX 134012705 134013085 -32637211 - L1Md_F2 LINE L1 -11 6571 6202 2 1607 225 323 15 0 chrX 134013184 134013249 -32637047 - ORR1E LTR MaLR -292 67 2 2 1607 423 313 134 9 chrX 134013272 134013488 -32636808 + MIR SINE MIR 18 260 -2 2 1607 367 260 13 0 chrX 134013573 134013650 -32636646 + ID4 SINE ID 2 79 -4 3 1607 833 341 28 63 chrX 134014351 134014777 -32635519 - MTD LTR MaLR -8 411 1 3 1607 242 330 18 9 chrX 134014969 134015082 -32635214 - PB1D10 SINE Alu -3 114 1 3 1607 1351 287 80 15 chrX 134015083 134015744 -32634552 - L1MA6 LINE L1 -126 6174 5471 3 1607 2165 116 36 30 chrX 134015751 134016116 -32634180 - Lx LINE L1 -1 6653 6287 3 1607 371 129 16 0 chrX 134016117 134016179 -32634117 + Lx LINE L1 6221 6283 -371 3 1607 268 228 51 26 chrX 134016176 134016293 -32634003 - L1M1 LINE L1 -824 5476 5357 3 1607 552 15 0 0 chrX 134016336 134016401 -32633895 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 1607 552 326 99 61 chrX 134016458 134016771 -32633525 - MT2A LTR ERVL -134 399 75 3 1607 281 344 30 60 chrX 134016699 134016832 -32633464 - MTD LTR MaLR -241 178 50 2 1607 231 271 203 33 chrX 134016865 134017170 -32633126 - L1M2 LINE L1 -837 5306 4950 3 1607 2097 199 60 5 chrX 134017171 134017555 -32632741 - MTC LTR MaLR -14 407 3 3 1607 318 301 8 8 chrX 134017561 134017685 -32632611 - L1M2 LINE L1 -1179 4964 4841 3 1607 4287 221 36 18 chrX 134017686 134018593 -32631703 + ORR1D1-int LTR MaLR 447 1370 0 4 1607 1090 220 123 90 chrX 134018593 134018927 -32631369 + ORR1D1 LTR MaLR 1 345 -29 4 1607 1196 179 14 18 chrX 134019123 134019345 -32630951 - URR1A DNA MER1_type -5 221 1 4 1607 268 178 13 64 chrX 134019720 134019798 -32630498 - L1MB4 LINE L1 -2 6178 6105 4 1607 313 298 0 19 chrX 134019792 134019898 -32630398 - Lx9 LINE L1 -370 7274 7171 4 1607 378 189 0 32 chrX 134019907 134020000 -32630296 - Lx9 LINE L1 -846 6798 6709 4 1607 668 290 105 39 chrX 134020010 134020598 -32629698 - L1M2 LINE L1 -3351 2792 2166 3 1607 5892 136 34 5 chrX 134021020 134022544 -32627752 + L1_Mus3 LINE L1 675 2242 -3641 4 1607 6599 114 3 10 chrX 134022522 134023671 -32626625 + L1_Mus3 LINE L1 5483 6622 -16 4 1607 263 382 21 0 chrX 134023685 134023876 -32626420 + Lx8 LINE L1 7012 7206 -267 4 1607 808 93 0 0 chrX 134024067 134024185 -32626111 + Lx3B LINE L1 6168 6285 -688 4 1607 7371 59 19 31 chrX 134024186 134025189 -32625107 + L1Md_F2 LINE L1 5590 6580 -2 4 1607 495 0 0 0 chrX 134025201 134025256 -32625040 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1607 21 0 0 0 chrX 134025295 134025316 -32624980 + AT_rich Low_complexity Low_complexity 1 21 0 4 1607 460 297 30 38 chrX 134025319 134025774 -32624522 - L1MDb LINE L1 -2075 4462 4017 5 1607 314 307 97 57 chrX 134025794 134026198 -32624098 - L1MDb LINE L1 -4600 2033 1614 5 1607 38 22 0 0 chrX 134026204 134026249 -32624047 + AT_rich Low_complexity Low_complexity 1 45 0 5 1607 494 302 29 32 chrX 134026263 134026444 -32623852 - B3A SINE B2 0 198 1 5 1607 517 271 60 10 chrX 134026501 134026803 -32623493 - L1MDb LINE L1 -5024 1516 1200 5 1607 479 269 17 8 chrX 134026841 134026961 -32623335 + ID_B1 SINE B4 104 224 0 5 1607 496 333 117 52 chrX 134027009 134027507 -32622789 - L1MDb LINE L1 -5460 1173 644 5 1607 4658 83 17 3 chrX 134027914 134028552 -32621744 - L1_Mus4 LINE L1 0 6636 5990 5 1607 243 303 141 0 chrX 134028739 134028838 -32621458 - L2a LINE L2 -268 3158 3046 5 1607 496 284 20 41 chrX 134028944 134029091 -32621205 + RSINE1 SINE B4 6 149 -16 5 1607 530 274 59 0 chrX 134029355 134029592 -32620704 - L1_Rod LINE L1 -6851 321 71 5 1607 315 223 19 0 chrX 134029626 134029729 -32620567 - Lx9 LINE L1 -19 7625 7521 5 1607 336 48 0 0 chrX 134029729 134029771 -32620525 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 5 1607 450 96 0 0 chrX 134029837 134029910 -32620386 + (CA)n Simple_repeat Simple_repeat 2 74 0 6 1607 216 143 0 0 chrX 134029938 134029980 -32620316 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1607 802 202 87 13 chrX 134030005 134030236 -32620060 - Lx9 LINE L1 -130 7514 7267 5 1607 351 295 51 62 chrX 134030989 134031166 -32619130 + RMER15-int LTR ERVL 224 398 -4601 6 1607 519 266 14 0 chrX 134031143 134031286 -32619010 + RMER15-int LTR ERVL 500 644 -4355 6 1607 843 29 0 0 chrX 134031286 134031388 -32618908 + (TG)n Simple_repeat Simple_repeat 1 102 0 6 1607 2512 281 40 8 chrX 134031492 134032251 -32618045 + RMER15-int LTR ERVL 771 1553 -3446 6 1607 977 274 36 11 chrX 134032324 134032601 -32617695 + RMER15-int LTR ERVL 2275 2558 -2441 6 1607 1484 294 73 5 chrX 134032608 134033166 -32617130 + RMER15-int LTR ERVL 4146 4741 -258 6 1607 2576 108 34 70 chrX 134033298 134033744 -32616552 - RLTR23 LTR ERV1 0 430 1 6 1607 231 268 11 34 chrX 134033781 134033857 -32616439 + PB1D10 SINE Alu 2 78 -71 6 1607 403 241 26 0 chrX 134034371 134034487 -32615809 + L1MA4 LINE L1 5814 5932 -368 6 1607 4697 118 44 0 chrX 134034686 134035442 -32614854 + L1Md_F LINE L1 370 1158 -5458 6 1607 1706 108 0 17 chrX 134035436 134035727 -32614569 + L1Md_F LINE L1 1785 2070 -3813 6 1607 904 55 16 0 chrX 134035828 134035955 -32614341 + (TTCTCC)n Simple_repeat Simple_repeat 5 133 0 6 1607 285 29 0 0 chrX 134035977 134036011 -32614285 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1607 21623 18 0 0 chrX 134036091 134039433 -32610863 - L1Md_T LINE L1 0 6582 3241 6 1607 23643 107 8 39 chrX 134039427 134044382 -32605914 + L1Md_F2 LINE L1 828 5589 -297 7 1607 7450 71 14 3 chrX 134044383 134045367 -32604929 + L1Md_F2 LINE L1 5591 6585 0 7 1607 207 162 0 0 chrX 134045650 134045687 -32604609 + (CATA)n Simple_repeat Simple_repeat 3 39 0 7 1607 258 320 36 122 chrX 134046120 134046259 -32604037 - LTR33B LTR ERVL -331 172 46 7 1607 24 0 0 0 chrX 134046542 134046566 -32603730 + AT_rich Low_complexity Low_complexity 1 24 0 7 1607 412 267 24 87 chrX 134046568 134046675 -32603621 - PB1D7 SINE Alu 0 120 18 7 1607 1916 191 170 28 chrX 134046675 134047175 -32603121 - RMER15 LTR ERVL 0 575 5 7 1607 412 267 24 87 chrX 134047175 134047194 -32603102 - PB1D7 SINE Alu -103 17 2 7 1607 425 225 0 0 chrX 134047261 134047350 -32602946 + B1F SINE Alu 61 149 0 7 1607 713 238 58 0 chrX 134047709 134047881 -32602415 + RLTR40 LTR ERVK 2 183 -634 7 1607 2623 229 41 27 chrX 134048056 134048688 -32601608 + RLTR40 LTR ERVK 174 814 -3 7 1607 307 307 51 39 chrX 134048987 134049143 -32601153 + L1MEd LINE L1 839 996 -5123 7 1607 310 332 70 25 chrX 134049399 134050010 -32600286 + L1M2 LINE L1 2138 2776 -4073 7 1607 993 334 82 23 chrX 134050141 134051293 -32599003 + L1M2 LINE L1 2906 4125 -2720 7 1607 2031 151 6 16 chrX 134051287 134051651 -32598645 + Lx LINE L1 6153 6512 -142 8 1607 231 114 0 0 chrX 134051655 134051690 -32598606 + (TGAG)n Simple_repeat Simple_repeat 2 36 0 8 1607 273 322 91 25 chrX 134051690 134051811 -32598485 + B4A SINE B4 71 199 -93 8 1607 696 82 0 103 chrX 134051720 134051856 -32598440 + B1_Mus1 SINE Alu 27 148 0 8 1607 27 0 0 0 chrX 134051933 134051960 -32598336 + AT_rich Low_complexity Low_complexity 1 27 0 8 1607 3198 272 70 15 chrX 134052020 134053067 -32597229 + Lx9 LINE L1 6365 7468 -176 8 1607 303 93 0 0 chrX 134053070 134053113 -32597183 + (TA)n Simple_repeat Simple_repeat 2 44 0 8 1607 252 258 0 0 chrX 134053298 134053364 -32596932 + L1M2 LINE L1 4197 4262 -2580 7 1607 1966 269 88 30 chrX 134053533 134054745 -32595551 + L1M2 LINE L1 5337 6546 -3 7 1607 561 64 0 0 chrX 134054784 134054862 -32595434 + (CA)n Simple_repeat Simple_repeat 1 78 0 8 1607 441 0 0 0 chrX 134054862 134054910 -32595386 + (GA)n Simple_repeat Simple_repeat 2 50 0 8 1607 33 0 0 0 chrX 134055253 134055286 -32595010 + AT_rich Low_complexity Low_complexity 1 33 0 8 1607 354 45 0 0 chrX 134055715 134055759 -32594537 + B1_Mus1 SINE Alu 1 44 -104 9 1607 3383 74 69 13 chrX 134055764 134056240 -32594056 + L1_Mus2 LINE L1 6064 6566 0 9 1607 21 82 0 0 chrX 134056325 134056374 -32593922 + AT_rich Low_complexity Low_complexity 1 49 0 9 1607 372 313 13 20 chrX 134056496 134056649 -32593647 - L1MEg LINE L1 -522 5718 5567 9 1607 866 99 0 8 chrX 134056778 134056910 -32593386 + (TTCC)n Simple_repeat Simple_repeat 3 133 0 9 1607 419 123 12 0 chrX 134056910 134056970 -32593326 + (TTTTC)n Simple_repeat Simple_repeat 3 63 0 9 1607 329 293 62 41 chrX 134056970 134057116 -32593180 - B1F SINE Alu 0 149 1 9 1607 419 123 12 0 chrX 134057116 134057131 -32593165 + (TTTTC)n Simple_repeat Simple_repeat 3 17 0 9 1607 433 290 127 49 chrX 134057696 134058146 -32592150 - L1MEg LINE L1 -1565 4581 4097 9 1607 1111 52 0 0 chrX 134058149 134058285 -32592011 + B1_Mus2 SINE Alu 1 136 -11 9 1607 368 20 0 20 chrX 134058285 134058335 -32591961 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 9 1607 1484 241 88 20 chrX 134058410 134058796 -32591500 + MTD LTR MaLR 3 405 -14 1 1607 7410 197 44 41 chrX 134058797 134061010 -32589286 - Lx6 LINE L1 -169 7291 5046 1 1607 11606 181 45 84 chrX 134061001 134062085 -32588211 - Lx6 LINE L1 -1535 4345 3320 1 1607 7599 89 12 1 chrX 134062085 134063172 -32587124 - Lx3_Mus LINE L1 -7 7002 5904 1 1607 11606 181 45 84 chrX 134063172 134064617 -32585679 - Lx6 LINE L1 -2561 3319 1953 1 1607 213 94 0 0 chrX 134064617 134064649 -32585647 + (TGG)n Simple_repeat Simple_repeat 1 32 0 1 1607 204 125 0 0 chrX 134064655 134064687 -32585609 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1607 11606 225 69 75 chrX 134064687 134066251 -32584045 - Lx6 LINE L1 -3928 1952 346 1 1607 2125 48 45 0 chrX 134066309 134066577 -32583719 - L1Md_F2 LINE L1 -13 6569 6290 1 1607 26752 69 2 2 chrX 134066592 134071028 -32579268 - L1Md_F LINE L1 -1082 4801 366 1 1607 295 276 27 0 chrX 134071527 134071648 -32578648 - L1MEg LINE L1 -3116 3030 2907 9 1607 259 298 28 19 chrX 134071661 134071767 -32578529 - ERVL-E-int LTR ERVL -2597 3070 2964 1 1607 741 273 0 53 chrX 134071801 134072010 -32578286 + B3A SINE B2 1 198 0 1 1607 417 329 57 51 chrX 134072449 134072802 -32577494 - ERVL-E-int LTR ERVL -3170 2544 2130 1 1607 6518 117 10 65 chrX 134072802 134073931 -32576365 + Lx2 LINE L1 5930 6995 -2 1 1607 363 359 68 54 chrX 134073931 134074313 -32575983 - ERVL-E-int LTR ERVL -3524 2190 1799 1 1607 24 96 0 0 chrX 134074475 134074548 -32575748 + AT_rich Low_complexity Low_complexity 1 73 0 1 1607 33452 84 16 6 chrX 134075334 134081458 -32568838 - L1Md_F2 LINE L1 -12 6570 382 1 1607 26 50 0 0 chrX 134081480 134081520 -32568776 + AT_rich Low_complexity Low_complexity 1 40 0 1 1607 563 288 119 81 chrX 134081728 134082098 -32568198 + MLT1A1 LTR MaLR 21 404 -4 1 1607 275 271 68 34 chrX 134082110 134082198 -32568098 - MLT1A0 LTR MaLR -272 93 3 1 1607 249 348 66 97 chrX 134082489 134082839 -32567457 - L1MEg LINE L1 -5379 863 525 9 1607 904 264 9 14 chrX 134083075 134083290 -32567006 + B3 SINE B2 2 215 -1 1 1607 547 282 62 33 chrX 134083671 134083913 -32566383 - L1MA7 LINE L1 -75 6216 5968 1 1607 333 179 0 0 chrX 134083968 134084040 -32566256 + L1MA9 LINE L1 5877 5948 -352 1 1607 263 333 34 67 chrX 134084058 134084267 -32566029 + L2a LINE L2 3158 3359 -67 1 1607 1276 159 4 62 chrX 134085319 134085594 -32564702 - L1Md_F3 LINE L1 0 6584 6326 1 1607 451 174 130 16 chrX 134085597 134085720 -32564576 - Lx9 LINE L1 -3 7641 7505 1 1607 478 355 55 14 chrX 134085725 134085945 -32564351 + B4A SINE B4 2 230 -62 1 1607 330 235 103 56 chrX 134086149 134086275 -32564021 - B1F2 SINE Alu 0 149 18 1 200 3863 26 37 0 chrX 134086537 134086996 -32563300 + L1Md_F3 LINE L1 6078 6553 -31 1 1608 315 0 0 0 chrX 134086996 134087031 -32563265 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 1608 195 100 0 0 chrX 134088009 134088039 -32562257 + (CATA)n Simple_repeat Simple_repeat 2 31 0 1 1608 6850 78 88 0 chrX 134088180 134089140 -32561156 - L1_Mus3 LINE L1 -5 6633 5589 1 1608 1864 66 12 0 chrX 134089140 134089382 -32560914 - L1Md_F2 LINE L1 -12 6570 6326 1 1608 3022 131 10 21 chrX 134089382 134089569 -32560727 - L1_Mus3 LINE L1 -295 5588 5406 1 1608 9136 125 22 1 chrX 134089558 134090844 -32559452 + L1_Mm LINE L1 3941 5232 -651 1 1608 763 50 16 24 chrX 134090844 134090968 -32559328 + (TA)n Simple_repeat Simple_repeat 1 123 0 1 1608 9136 125 22 1 chrX 134090968 134091130 -32559166 + L1_Mm LINE L1 5233 5418 -465 1 1608 663 196 142 0 chrX 134091486 134091634 -32558662 - B3 SINE B2 -9 207 39 1 1608 21 0 0 0 chrX 134093476 134093497 -32556799 + AT_rich Low_complexity Low_complexity 1 21 0 1 1608 861 199 56 40 chrX 134094902 134095153 -32555143 - RCHARR1 DNA MER1_type 0 974 720 1 1608 1845 257 48 8 chrX 134095153 134095628 -32554668 + Lx9 LINE L1 6389 6882 -762 1 1608 605 170 10 0 chrX 134095660 134095760 -32554536 - URR1B DNA MER1_type -99 126 26 1 1608 1961 239 66 44 chrX 134095765 134096352 -32553944 + Lx9 LINE L1 6872 7471 -173 1 1608 279 54 0 0 chrX 134096352 134096389 -32553907 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1608 29 94 0 0 chrX 134096457 134096542 -32553754 + AT_rich Low_complexity Low_complexity 1 85 0 1 1608 681 278 28 28 chrX 134096542 134096720 -32553576 + B3A SINE B2 20 197 -1 1 1608 1275 173 16 4 chrX 134096737 134096986 -32553310 - RCHARR1 DNA MER1_type -233 741 490 1 1608 944 300 4 29 chrX 134096977 134097221 -32553075 - RCHARR1 DNA MER1_type -734 240 3 1 1608 22 0 0 0 chrX 134097743 134097765 -32552531 + AT_rich Low_complexity Low_complexity 1 22 0 1 1608 382 381 71 17 chrX 134098402 134098696 -32551600 + L2a LINE L2 2956 3265 -161 1 1608 278 278 34 89 chrX 134098736 134098882 -32551414 + L2a LINE L2 3259 3396 -30 1 1608 223 257 176 28 chrX 134098908 134099016 -32551280 + L2c LINE L2 3048 3171 -216 1 1608 259 235 193 34 chrX 134099135 134099254 -32551042 + L1M4b LINE L1 23 160 -7174 1 1608 529 176 296 5 chrX 134099258 134099447 -32550849 + Lx9 LINE L1 7325 7568 -76 1 1608 1334 307 103 21 chrX 134099476 134100197 -32550099 + L1M4b LINE L1 641 1420 -5914 1 1608 180 182 0 0 chrX 134100206 134100250 -32550046 + (CTA)n Simple_repeat Simple_repeat 1 44 0 1 1608 330 274 137 14 chrX 134100322 134100458 -32549838 + L1M4b LINE L1 1436 1585 -5749 1 1608 450 0 0 0 chrX 134100458 134100508 -32549788 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 1608 330 274 137 14 chrX 134100508 134100582 -32549714 + L1M4b LINE L1 1586 1671 -5663 1 1608 322 252 316 0 chrX 134100612 134100767 -32549529 + L1M4b LINE L1 1742 1945 -5389 1 1608 224 214 0 0 chrX 134100920 134100962 -32549334 + (CCA)n Simple_repeat Simple_repeat 1 42 0 1 1608 549 110 0 0 chrX 134101229 134101311 -32548985 + (TCCC)n Simple_repeat Simple_repeat 4 85 0 1 1608 183 42 0 0 chrX 134101659 134101683 -32548613 + (CAT)n Simple_repeat Simple_repeat 1 24 0 1 1608 335 291 110 45 chrX 134101700 134101855 -32548441 - RSINE1 SINE B4 0 165 1 1 1608 324 0 0 0 chrX 134103023 134103059 -32547237 + (TTA)n Simple_repeat Simple_repeat 1 36 0 1 1608 1130 78 0 0 chrX 134103061 134103203 -32547093 - B1_Mus1 SINE Alu -6 142 1 1 1608 376 307 0 58 chrX 134103204 134103325 -32546971 - PB1D10 SINE Alu -1 116 3 1 1608 396 59 0 0 chrX 134104836 134104887 -32545409 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 1 1608 201 74 0 0 chrX 134106312 134106339 -32543957 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 1 1608 21 0 0 0 chrX 134107171 134107192 -32543104 + AT_rich Low_complexity Low_complexity 1 21 0 1 1608 775 240 40 20 chrX 134109199 134109399 -32540897 - MER2 DNA MER2_type -51 294 91 1 1608 369 0 0 0 chrX 134109401 134109442 -32540854 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1608 459 52 0 0 chrX 134109442 134109499 -32540797 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 1608 22 0 0 0 chrX 134110044 134110066 -32540230 + AT_rich Low_complexity Low_complexity 1 22 0 1 1608 799 261 17 0 chrX 134110408 134110588 -32539708 - B3 SINE B2 -31 185 3 1 1608 336 135 0 0 chrX 134110714 134110788 -32539508 + (T)n Simple_repeat Simple_repeat 1 74 0 1 1608 1110 56 28 0 chrX 134110805 134110948 -32539348 - B1_Mus1 SINE Alu 0 148 2 1 1608 364 319 9 0 chrX 134111881 134111994 -32538302 - MER3 DNA MER1_type -86 123 10 1 1608 3919 73 2 2 chrX 134113140 134113658 -32536638 + L1_Mus2 LINE L1 6048 6565 -1 1 1608 252 209 0 81 chrX 134113724 134113823 -32536473 + A-rich Low_complexity Low_complexity 1 91 0 1 1608 208 311 0 0 chrX 134114103 134114164 -32536132 - MIR SINE MIR -27 235 175 1 1608 333 289 0 0 chrX 134114197 134114273 -32536023 - ID4_ SINE ID -2 81 6 1 1608 2207 198 202 42 chrX 134114393 134114958 -32535338 + RMER1B Other Other 410 1064 -2 1 1608 368 183 18 71 chrX 134114953 134115065 -32535231 + Lx9 LINE L1 7532 7637 -7 1 1608 555 16 0 0 chrX 134115152 134115216 -32535080 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 1608 300 158 0 0 chrX 134115216 134115273 -32535023 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1608 21 0 0 0 chrX 134115297 134115318 -32534978 + AT_rich Low_complexity Low_complexity 1 21 0 1 1608 279 0 0 0 chrX 134116151 134116182 -32534114 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1608 429 355 0 27 chrX 134117854 134118042 -32532254 - MER5A DNA MER1_type 0 189 7 1 1608 579 284 27 0 chrX 134118303 134118451 -32531845 + RSINE1 SINE B4 2 153 -12 1 1608 706 256 19 15 chrX 134118575 134118781 -32531515 + B3 SINE B2 1 207 -9 1 1608 348 323 78 36 chrX 134118924 134119232 -32531064 + L1MB8 LINE L1 5815 6135 -43 1 1608 338 268 14 0 chrX 134119368 134119439 -32530857 + ID4_ SINE ID 3 74 -9 1 1608 8759 136 19 13 chrX 134119787 134121520 -32528776 + Lx2B LINE L1 5264 7000 0 1 1608 1504 234 74 13 chrX 134122643 134123037 -32527259 - MTD LTR MaLR -1 418 1 1 1608 5474 158 52 5 chrX 134124033 134125224 -32525072 - Lx5 LINE L1 -927 6123 4865 1 1608 4159 199 18 18 chrX 134125224 134126051 -32524245 + Lx5 LINE L1 6217 7043 -7 1 1608 180 0 0 0 chrX 134126286 134126306 -32523990 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1608 241 306 108 54 chrX 134126627 134126793 -32523503 + MIR SINE MIR 76 250 -12 1 1608 355 71 59 12 chrX 134126877 134126962 -32523334 + (CAAAAA)n Simple_repeat Simple_repeat 2 90 0 1 1608 217 200 0 0 chrX 134127167 134127202 -32523094 - B1F1 SINE Alu -56 93 59 1 1608 268 360 56 112 chrX 134127401 134127686 -32522610 - MamSINE1 SINE tRNA -16 274 6 1 1608 2007 254 38 6 chrX 134128548 134129046 -32521250 - Lx8 LINE L1 -320 7153 6640 1 1608 193 75 0 48 chrX 134129206 134129248 -32521048 + (TTTTTA)n Simple_repeat Simple_repeat 1 40 0 1 1608 2631 273 114 28 chrX 134129248 134130477 -32519819 - Lx6 LINE L1 -29 7431 5873 1 1608 1601 176 50 17 chrX 134130476 134130835 -32519461 - L1_Mur3 LINE L1 -1490 4390 4020 1 1608 7405 79 14 14 chrX 134131091 134132154 -32518142 - Lx3_Mus LINE L1 0 7009 5947 1 1608 646 317 101 91 chrX 134132172 134132372 -32517924 + Lx8 LINE L1 6200 6404 -1069 1 1608 1106 68 0 7 chrX 134132372 134132521 -32517775 + B1_Mus1 SINE Alu 1 148 0 1 1608 646 317 101 91 chrX 134132521 134132535 -32517761 + Lx8 LINE L1 6405 6414 -1059 1 1608 354 74 0 0 chrX 134132535 134132589 -32517707 + (CCAA)n Simple_repeat Simple_repeat 2 55 0 1 1608 646 317 101 91 chrX 134132589 134132800 -32517496 + Lx8 LINE L1 6415 6630 -843 1 1608 722 241 44 15 chrX 134133347 134133553 -32516743 - B3 SINE B2 -3 213 2 1 1608 231 346 13 0 chrX 134134493 134134571 -32515725 + MIR3 SINE MIR 14 92 -116 1 1608 1053 126 0 6 chrX 134134850 134135018 -32515278 - B2_Mm2 SINE B2 -2 193 27 1 1608 7880 54 2 5 chrX 134135020 134136219 -32514077 - L1Md_F2 LINE L1 0 6582 5390 1 1608 689 304 38 70 chrX 134138379 134139069 -32511227 - L1M2 LINE L1 -1141 4999 4363 1 1608 684 252 8 0 chrX 134139115 134139246 -32511050 - RSINE1 SINE B4 -19 146 15 2 1608 662 323 6 0 chrX 134139290 134139457 -32510839 - B3 SINE B2 -46 170 3 2 1608 296 346 130 50 chrX 134140123 134140445 -32509851 - L2a LINE L2 0 3426 3079 2 1608 4684 31 0 0 chrX 134140460 134141010 -32509286 + L1Md_T LINE L1 6031 6580 -2 2 1608 192 387 89 4 chrX 134141088 134141324 -32508972 - L2a LINE L2 -459 2960 2705 2 1608 221 214 69 35 chrX 134141782 134141840 -32508456 + B1F1 SINE Alu 3 62 -87 2 1608 222 200 0 0 chrX 134141891 134141924 -32508372 + polypurine Low_complexity Low_complexity 1 33 0 2 1608 432 0 0 0 chrX 134141924 134141972 -32508324 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 1608 222 200 0 0 chrX 134141972 134141983 -32508313 + polypurine Low_complexity Low_complexity 34 44 0 2 1608 1502 241 35 24 chrX 134142229 134142680 -32507616 - Charlie4a DNA MER1_type -6 502 47 2 1608 964 271 57 21 chrX 134143068 134143347 -32506949 - B4A SINE B4 -3 289 1 2 1608 1883 287 44 30 chrX 134143681 134144316 -32505980 - Lx8 LINE L1 -36 7437 6794 2 1608 588 73 0 0 chrX 134144324 134144406 -32505890 + (TG)n Simple_repeat Simple_repeat 1 82 0 2 1608 735 12 0 0 chrX 134144406 134144489 -32505807 + (GA)n Simple_repeat Simple_repeat 1 84 0 2 1608 2852 311 93 12 chrX 134145847 134147008 -32503288 + Lx8 LINE L1 6190 7444 -29 2 1608 315 71 0 0 chrX 134147044 134147086 -32503210 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1608 336 24 0 0 chrX 134147175 134147216 -32503080 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1608 28 0 0 0 chrX 134147244 134147272 -32503024 + AT_rich Low_complexity Low_complexity 1 28 0 2 1608 360 0 0 0 chrX 134147530 134147570 -32502726 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1608 342 143 100 0 chrX 134147741 134147811 -32502485 - Lx6 LINE L1 -9 7451 7375 2 1608 2930 78 2 2 chrX 134147822 134148218 -32502078 - L1_Mus2 LINE L1 0 6566 6171 2 1608 6596 226 138 18 chrX 134148219 134149538 -32500758 - Lx7 LINE L1 -104 7592 6101 2 1608 2782 75 36 3 chrX 134149538 134149925 -32500371 - MTB LTR MaLR 0 400 1 2 1608 6596 187 104 6 chrX 134149925 134150573 -32499723 - Lx7 LINE L1 -1596 6100 5406 2 1608 494 286 7 39 chrX 134151222 134151375 -32498921 + B1_Mur1 SINE Alu 2 149 0 2 1608 190 355 108 26 chrX 134151636 134151867 -32498429 - L2c LINE L2 -228 3159 2910 2 1608 295 282 39 0 chrX 134152025 134152103 -32498193 + ID2 SINE ID 3 83 0 2 1608 361 315 21 93 chrX 134152207 134152276 -32498020 - B1F1 SINE Alu -7 142 85 2 1608 1308 138 18 5 chrX 134152276 134152494 -32497802 + URR1B DNA MER1_type 5 225 0 2 1608 361 315 21 93 chrX 134152494 134152564 -32497732 - B1F1 SINE Alu -65 84 13 2 1608 319 309 7 14 chrX 134152586 134152727 -32497569 - L1MA6 LINE L1 -126 6174 6035 2 1608 342 0 0 0 chrX 134152945 134152983 -32497313 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1608 277 331 58 29 chrX 134153856 134153993 -32496303 - B1F SINE Alu -5 144 4 2 1608 3441 234 94 64 chrX 134154520 134154756 -32495540 - Lx6 LINE L1 0 7460 7244 2 1608 1196 68 0 0 chrX 134154756 134154904 -32495392 + B1_Mus1 SINE Alu 1 148 0 2 1608 3441 234 94 64 chrX 134154904 134155658 -32494638 - Lx6 LINE L1 -217 7243 6440 2 1608 286 208 0 0 chrX 134155659 134155712 -32494584 - Lx6 LINE L1 -936 6524 6472 2 1608 21 0 0 0 chrX 134155727 134155748 -32494548 + AT_rich Low_complexity Low_complexity 1 21 0 2 1608 551 325 6 24 chrX 134155751 134155915 -32494381 - RSINE1 SINE B4 -2 163 3 2 1608 4509 67 5 0 chrX 134156417 134157000 -32493296 - L1_Mm LINE L1 -949 4934 4349 2 1608 3085 56 20 0 chrX 134156999 134157048 -32493248 + L1Md_F2 LINE L1 5186 5234 -649 2 1608 261 0 0 0 chrX 134157048 134157077 -32493219 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 1608 3085 56 20 0 chrX 134157077 134157419 -32492877 + L1Md_F2 LINE L1 5235 5583 -300 2 1608 7253 82 3 27 chrX 134157420 134158436 -32491860 + L1Md_F2 LINE L1 5587 6578 -4 2 1608 459 0 0 0 chrX 134158847 134158898 -32491398 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1608 323 275 42 37 chrX 134159152 134159306 -32490990 + L1MA6 LINE L1 6115 6283 -17 2 1608 1675 55 0 9 chrX 134160134 134160354 -32489942 - L1Md_F2 LINE L1 -6 6576 6359 2 1608 1273 51 0 6 chrX 134160405 134160581 -32489715 + L1Md_F2 LINE L1 6407 6581 -1 2 1608 21 0 0 0 chrX 134160582 134160603 -32489693 + AT_rich Low_complexity Low_complexity 1 21 0 2 1608 1382 181 34 47 chrX 134160854 134161235 -32489061 - Lx7 LINE L1 -22 7674 7064 2 1608 219 402 35 1 chrX 134161487 134161648 -32488648 + MIRb SINE MIR 14 170 -92 2 1608 273 358 65 0 chrX 134161729 134161852 -32488444 - MIR SINE MIR -102 160 30 2 1608 1340 149 88 0 chrX 134162198 134162413 -32487883 + L1VL4 LINE L1 8 241 -6061 2 1608 382 123 138 0 chrX 134162407 134162472 -32487824 + MusHAL1 LINE L1 4 77 -3277 2 1608 8016 67 9 9 chrX 134162450 134163584 -32486712 + MusHAL1 LINE L1 734 1867 -1486 2 1608 4925 114 17 4 chrX 134163584 134164308 -32485988 + Lx LINE L1 5922 6654 0 2 1608 536 325 6 34 chrX 134164308 134164350 -32485946 + L1M4 LINE L1 2460 2492 -3654 2 1608 675 281 77 10 chrX 134164414 134164726 -32485570 - L1M2 LINE L1 -1293 4850 4518 2 1608 204 40 0 0 chrX 134164915 134164940 -32485356 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2 1608 601 268 8 0 chrX 134164947 134165074 -32485222 - B1_Mur1 SINE Alu -21 128 1 2 1608 296 224 57 137 chrX 134164969 134165093 -32485203 - MT2B LTR ERVL -336 265 152 2 1608 963 101 13 0 chrX 134165683 134165832 -32484464 + L1Md_F2 LINE L1 6432 6582 0 2 1608 200 398 92 13 chrX 134165874 134166151 -32484145 + L2b LINE L2 3108 3374 -1 2 1608 495 331 24 24 chrX 134166296 134166463 -32483833 + Lx8 LINE L1 7127 7293 -180 2 1608 414 0 0 0 chrX 134166891 134166937 -32483359 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1608 29 28 0 0 chrX 134167093 134167129 -32483167 + AT_rich Low_complexity Low_complexity 1 36 0 2 1608 261 339 50 0 chrX 134167269 134167390 -32482906 - Lx8 LINE L1 -379 7094 6968 2 1608 1028 297 123 7 chrX 134167427 134167874 -32482422 - Lx8 LINE L1 -583 6890 6392 2 1608 724 238 135 18 chrX 134167894 134168326 -32481970 + L1_Mur3 LINE L1 5195 5705 -607 2 1608 26 74 0 0 chrX 134168419 134168473 -32481823 + AT_rich Low_complexity Low_complexity 1 54 0 2 1608 2182 180 64 11 chrX 134168610 134169064 -32481232 + Lx9 LINE L1 7145 7622 -22 2 1608 37 0 0 0 chrX 134169076 134169113 -32481183 + AT_rich Low_complexity Low_complexity 1 37 0 2 1608 1841 151 139 29 chrX 134169141 134169516 -32480780 + MTC LTR MaLR 6 421 0 2 1608 5971 161 67 30 chrX 134169536 134170496 -32479800 + MTC-int LTR MaLR 30 1006 -252 2 1608 450 0 0 0 chrX 134170496 134170546 -32479750 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 2 1608 5971 161 67 30 chrX 134170546 134170770 -32479526 + MTC-int LTR MaLR 1007 1257 -1 2 1608 1454 175 271 3 chrX 134170770 134171102 -32479194 + MTC LTR MaLR 1 421 0 2 1608 24 0 0 0 chrX 134171104 134171128 -32479168 + AT_rich Low_complexity Low_complexity 1 24 0 2 1608 6096 51 1 1 chrX 134171130 134171875 -32478421 + L1_Mus1 LINE L1 5820 6564 -3 2 1608 227 294 67 19 chrX 134171884 134171988 -32478308 - Lx7 LINE L1 -22 7674 7566 2 1608 270 138 34 11 chrX 134172038 134172080 -32478216 + (CAAA)n Simple_repeat Simple_repeat 4 47 0 2 1608 1170 62 0 0 chrX 134172080 134172225 -32478071 + B1_Mus2 SINE Alu 1 145 -2 2 1608 270 138 34 11 chrX 134172225 134172270 -32478026 + (CAAA)n Simple_repeat Simple_repeat 4 48 0 2 1608 216 86 0 0 chrX 134172279 134172314 -32477982 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 2 1608 237 33 0 0 chrX 134172521 134172551 -32477745 + (CAA)n Simple_repeat Simple_repeat 3 32 0 2 1608 3456 279 78 52 chrX 134172684 134172838 -32477458 - Tigger1 DNA MER2_type 0 2418 2281 2 1608 2859 187 2 2 chrX 134172838 134173336 -32476960 - Lx4A LINE L1 0 7058 6561 2 1608 3456 279 78 52 chrX 134173336 134174528 -32475768 - Tigger1 DNA MER2_type -138 2280 1037 2 1608 323 274 167 0 chrX 134174544 134174646 -32475650 + MTD LTR MaLR 2 120 -299 2 1608 5645 210 55 11 chrX 134174666 134175845 -32474451 - Lx5 LINE L1 -5 7045 5815 2 1608 739 174 0 125 chrX 134175850 134176034 -32474262 + Lx5 LINE L1 5615 5775 -1275 2 1608 766 260 164 11 chrX 134176036 134176311 -32473985 + MTD LTR MaLR 64 404 -15 2 1608 663 13 0 0 chrX 134176315 134176391 -32473905 + (CAGAA)n Simple_repeat Simple_repeat 5 80 0 2 1608 3492 239 103 14 chrX 134176403 134177350 -32472946 - Tigger1 DNA MER2_type -1385 1033 2 2 1608 1780 119 0 23 chrX 134178196 134178497 -32471799 - L1_Mus4 LINE L1 -6 6630 6337 2 1608 3673 143 6 17 chrX 134178497 134179144 -32471152 + L1_Mm LINE L1 4716 5355 -528 2 1608 2187 138 11 17 chrX 134179510 134179916 -32470380 - Lx5 LINE L1 -1246 5804 5399 2 1608 450 0 0 0 chrX 134180612 134180662 -32469634 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 2 1608 209 381 112 25 chrX 134181812 134182054 -32468242 + MIRb SINE MIR 1 263 -5 2 1608 28 79 0 0 chrX 134183297 134183360 -32466936 + AT_rich Low_complexity Low_complexity 1 63 0 2 1608 1638 73 0 9 chrX 134183446 134183667 -32466629 + L1Md_F2 LINE L1 6340 6558 -24 2 1608 360 0 0 0 chrX 134183667 134183707 -32466589 + (TAA)n Simple_repeat Simple_repeat 3 42 0 2 1608 428 105 343 40 chrX 134184737 134184836 -32465460 + B1_Mus2 SINE Alu 17 145 -2 2 1608 215 364 40 40 chrX 134185764 134185890 -32464406 - L2 LINE L2 -453 2966 2841 2 1608 192 111 0 0 chrX 134186388 134186424 -32463872 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 2 1608 235 153 0 48 chrX 134188984 134189046 -32461250 + CT-rich Low_complexity Low_complexity 3 61 0 2 1608 307 300 0 0 chrX 134189055 134189125 -32461171 - ID4 SINE ID 0 83 14 2 1608 200 34 0 33 chrX 134189512 134189542 -32460754 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1608 1822 198 168 16 chrX 134189553 134189999 -32460297 - Lx5 LINE L1 -4 7046 6533 2 1608 817 262 18 41 chrX 134191601 134191820 -32458476 + B3 SINE B2 3 216 0 2 1608 2932 131 15 2 chrX 134192072 134192548 -32457748 + Lx LINE L1 6173 6654 0 2 1608 1216 282 46 19 chrX 134192609 134192978 -32457318 - MTEa LTR MaLR 0 379 1 2 1608 415 325 47 100 chrX 134193269 134193649 -32456647 - L1M5 LINE L1 -2164 3982 3623 2 1608 1454 112 174 16 chrX 134193687 134193940 -32456356 - Lx3B LINE L1 0 6973 6681 2 1608 805 98 30 0 chrX 134193964 134194096 -32456200 + (TTTC)n Simple_repeat Simple_repeat 2 137 0 3 1608 914 58 0 0 chrX 134194104 134194224 -32456072 - B1_Mm SINE Alu -7 140 21 3 1608 345 308 77 53 chrX 134194242 134194451 -32455845 - L1M5 LINE L1 -2567 3579 3366 2 1608 245 256 37 0 chrX 134194476 134194558 -32455738 - L1MA6 LINE L1 -111 6189 6105 3 1608 2191 164 69 3 chrX 134194685 134195076 -32455220 + MTC LTR MaLR 5 421 0 3 1608 235 319 80 0 chrX 134195230 134195393 -32454903 - L1M5 LINE L1 -3595 2551 2376 2 1608 229 233 54 32 chrX 134195462 134195555 -32454741 - L1MEf LINE L1 -3995 3108 3014 3 1608 2865 57 68 63 chrX 134195566 134195994 -32454302 - L1_Mus2 LINE L1 0 6566 6137 3 1608 465 303 35 46 chrX 134196212 134196409 -32453887 + MER58A DNA MER1_type 3 197 -27 3 1608 416 321 123 47 chrX 134196563 134197055 -32453241 - L1MEf LINE L1 -4324 2778 2198 3 1608 1996 28 23 16 chrX 134197055 134197313 -32452983 - L1Md_F2 LINE L1 -12 6570 6311 3 1608 338 332 84 48 chrX 134197313 134197533 -32452763 - L1MEf LINE L1 -4792 2310 2075 3 1608 240 324 16 54 chrX 134197718 134197904 -32452392 + L1M2 LINE L1 2801 2979 -3164 3 1608 1056 273 109 56 chrX 134197909 134198397 -32451899 + L1_Rod LINE L1 4800 5271 -576 3 1608 3370 33 5 0 chrX 134198397 134198791 -32451505 + MTA_Mm LTR MaLR 1 396 0 3 1608 1056 296 138 44 chrX 134198791 134199281 -32451015 + L1_Rod LINE L1 5272 5846 -1 3 1608 320 111 19 0 chrX 134199393 134199447 -32450849 + (GA)n Simple_repeat Simple_repeat 1 55 0 3 1608 185 290 100 64 chrX 134200553 134200693 -32449603 - L2c LINE L2 -1 3374 3230 3 1608 308 371 38 8 chrX 134200794 134200927 -32449369 - MIRb SINE MIR -131 137 1 3 1608 209 284 76 47 chrX 134201150 134201275 -32449021 - L2c LINE L2 -208 3167 3038 3 1608 692 113 23 61 chrX 134201994 134202126 -32448170 + L1_Mus1 LINE L1 6439 6565 -2 3 1608 28 0 0 0 chrX 134202823 134202851 -32447445 + AT_rich Low_complexity Low_complexity 1 28 0 3 1608 277 300 25 0 chrX 134202891 134202971 -32447325 - Tigger5 DNA MER2_type 0 2406 2325 3 1608 387 376 143 18 chrX 134202984 134203201 -32447095 - Tigger5 DNA MER2_type -2163 243 1 3 1608 459 0 0 0 chrX 134203893 134203944 -32446352 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 1608 367 295 26 35 chrX 134204913 134205029 -32445267 - PB1D10 SINE Alu -2 115 1 3 1608 183 363 96 54 chrX 134205109 134205275 -32445021 - L3 LINE CR1 -126 4363 4191 3 1608 454 182 41 16 chrX 134205693 134205816 -32444480 - Lx9 LINE L1 -3 7641 7516 3 1608 198 0 0 0 chrX 134205907 134205929 -32444367 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1608 1690 286 61 13 chrX 134206087 134206625 -32443671 - Lx7 LINE L1 -328 7368 6805 3 1608 21 0 0 0 chrX 134207073 134207094 -32443202 + AT_rich Low_complexity Low_complexity 1 21 0 3 1608 196 333 13 13 chrX 134207283 134207362 -32442934 + L3b LINE CR1 63 141 -341 3 1608 232 326 88 68 chrX 134207724 134207872 -32442424 + MARNA DNA Mariner 57 207 -379 3 1608 601 252 0 0 chrX 134209056 134209167 -32441129 - B1F SINE Alu -28 121 11 3 1608 210 373 92 31 chrX 134209095 134209225 -32441071 - B4 SINE B4 -125 167 30 3 1608 1291 268 22 16 chrX 134209609 134209977 -32440319 - ORR1D2 LTR MaLR 0 370 1 3 1608 734 313 86 8 chrX 134211507 134211752 -32438544 - MTE-int LTR MaLR -492 1088 825 3 1608 533 344 78 5 chrX 134211811 134212004 -32438292 - MTE2b LTR MaLR -160 219 13 3 1608 232 370 0 0 chrX 134212991 134213064 -32437232 + ID4_ SINE ID 3 75 -8 3 1608 465 296 186 8 chrX 134213198 134213262 -32437034 + RMER15 LTR ERVL 291 371 -204 3 1608 240 35 0 0 chrX 134213262 134213291 -32437005 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 1608 465 296 186 8 chrX 134213291 134213468 -32436828 + RMER15 LTR ERVL 372 575 0 3 1608 191 379 145 21 chrX 134213553 134213739 -32436557 + L2 LINE L2 2682 2890 -529 3 1608 646 231 17 0 chrX 134214505 134214622 -32435674 - B1_Mur1 SINE Alu -27 122 4 3 1608 25 31 0 0 chrX 134214651 134214683 -32435613 + AT_rich Low_complexity Low_complexity 1 32 0 3 1608 916 221 43 14 chrX 134214726 134214933 -32435363 + B3 SINE B2 2 214 -2 3 1608 1079 53 0 0 chrX 134215260 134215393 -32434903 - L1_Mus2 LINE L1 -355 6211 6079 3 1608 3014 67 0 3 chrX 134215393 134215783 -32434513 + L1_Mus2 LINE L1 6178 6566 0 3 1608 1082 251 95 74 chrX 134216917 134217282 -32433014 - Lx8 LINE L1 -17 7456 7063 3 1608 2774 189 15 11 chrX 134217282 134217720 -32432576 + Lx4B LINE L1 6508 6945 -113 3 0 186 43 0 0 chrX 134217720 134217743 -32432553 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 1609 2774 189 15 11 chrX 134217743 134217849 -32432447 + Lx4B LINE L1 6946 7053 -5 3 1609 1082 251 95 74 chrX 134217849 134217956 -32432340 - Lx8 LINE L1 -411 7062 6974 3 1609 369 0 0 0 chrX 134218215 134218256 -32432040 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1609 540 0 0 0 chrX 134218256 134218315 -32431981 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 1609 429 20 0 0 chrX 134219446 134219496 -32430800 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1609 180 0 0 0 chrX 134220821 134220841 -32429455 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 3 1609 993 116 0 20 chrX 134220841 134220981 -32429315 - B1_Mus1 SINE Alu -8 140 2 3 1609 275 96 0 19 chrX 134221290 134221343 -32428953 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 3 1609 1141 63 0 14 chrX 134221343 134221488 -32428808 - B1_Mus2 SINE Alu 0 147 5 3 1609 1094 133 33 6 chrX 134221676 134221858 -32428438 + B2_Mm2 SINE B2 1 187 -8 3 1609 1243 77 5 22 chrX 134223073 134223525 -32426771 + (TTTC)n Simple_repeat Simple_repeat 1 443 0 3 1609 660 227 0 0 chrX 134223538 134223670 -32426626 - B1_Mur2 SINE Alu -5 144 13 3 1609 456 164 333 7 chrX 134223753 134223888 -32426408 - MTD LTR MaLR -8 411 233 3 1609 3183 19 0 3 chrX 134223888 134224256 -32426040 - IAPLTR1_Mm LTR ERVK 0 367 1 3 1609 55512 21 17 2 chrX 134224256 134230637 -32419659 - IAPEz-int LTR ERVK 0 6481 8 3 1609 3173 22 0 3 chrX 134230637 134231005 -32419291 - IAPLTR1_Mm LTR ERVK 0 367 1 3 1609 912 291 40 0 chrX 134231005 134231232 -32419064 - MTD LTR MaLR -181 238 3 3 1609 421 239 168 24 chrX 134231431 134231598 -32418698 - MIR SINE MIR -5 257 67 3 1609 1052 245 146 26 chrX 134231610 134231988 -32418308 - Lx6 LINE L1 -1099 6361 5939 3 1609 5397 208 16 49 chrX 134231985 134232853 -32417443 + Lx6 LINE L1 6350 7203 -257 3 1609 1966 40 4 19 chrX 134232853 134233109 -32417187 - L1_Mus2 LINE L1 0 6566 6315 3 1609 5397 208 16 49 chrX 134233109 134233379 -32416917 + Lx6 LINE L1 7204 7450 -10 3 1609 357 255 176 16 chrX 134234318 134234505 -32415791 + Lx8 LINE L1 7252 7468 -5 3 1609 23 0 0 0 chrX 134234505 134234528 -32415768 + AT_rich Low_complexity Low_complexity 1 23 0 3 1609 222 271 0 0 chrX 134234903 134234951 -32415345 + (TCCA)n Simple_repeat Simple_repeat 1 48 0 3 1609 969 338 68 53 chrX 134235175 134235687 -32414609 - MLT1F2 LTR MaLR -3 557 38 3 1609 1106 76 12 6 chrX 134235698 134235870 -32414426 - L1_Mus3 LINE L1 -12 6626 6454 3 1609 475 237 8 0 chrX 134235872 134235990 -32414306 - ORR1A1 LTR MaLR -221 125 7 3 1609 244 340 113 0 chrX 134236160 134236266 -32414030 - MLT1J LTR MaLR -318 194 77 3 1609 27 73 0 0 chrX 134236497 134236552 -32413744 + AT_rich Low_complexity Low_complexity 1 55 0 3 1609 645 346 92 15 chrX 134236552 134236945 -32413351 + Lx8 LINE L1 7010 7432 -41 3 1609 302 358 58 35 chrX 134237886 134238057 -32412239 - MIRb SINE MIR -28 240 66 3 1609 184 385 0 0 chrX 134240402 134240467 -32409829 - MIRb SINE MIR -148 120 56 3 1609 1758 228 54 26 chrX 134240842 134241233 -32409063 + MTD LTR MaLR 6 407 -12 3 1609 753 147 8 8 chrX 134242366 134242483 -32407813 + RLTR20C LTR ERVK 1 117 -417 3 1609 1577 186 14 68 chrX 134242521 134242873 -32407423 + MYSERV16_I-int LTR ERVK 609 941 -1385 3 1609 6123 133 64 14 chrX 134242863 134244066 -32406230 + MYSERV16_I-int LTR ERVK 1062 2324 -2 3 1609 2429 161 33 16 chrX 134244068 134244492 -32405804 + RLTR20C LTR ERVK 1 431 -103 3 1609 249 109 0 0 chrX 134244494 134244540 -32405756 + (TCTG)n Simple_repeat Simple_repeat 1 46 0 3 1609 389 307 57 144 chrX 134244581 134244844 -32405452 - MTEa LTR MaLR -133 246 7 3 1609 37 39 0 0 chrX 134245279 134245330 -32404966 + AT_rich Low_complexity Low_complexity 1 51 0 3 1609 630 177 52 84 chrX 134245330 134245484 -32404812 - B1_Mur3 SINE Alu 0 149 1 3 1609 220 179 0 0 chrX 134245614 134245653 -32404643 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1609 5028 277 56 50 chrX 134245675 134248506 -32401790 - Lx7 LINE L1 -396 7300 4466 3 1609 350 273 48 54 chrX 134248730 134248877 -32401419 + MIR3 SINE MIR 4 149 -59 3 1609 358 266 145 26 chrX 134249141 134249334 -32400962 - MamRep434 DNA TcMar -205 221 6 3 1609 4847 69 0 0 chrX 134250345 134250966 -32399330 - L1_Mus1 LINE L1 0 6567 5947 3 1609 26 0 0 0 chrX 134250977 134251003 -32399293 + AT_rich Low_complexity Low_complexity 1 26 0 3 1609 342 316 0 0 chrX 134251021 134251100 -32399196 - RSINE1 SINE B4 -9 156 78 3 1609 216 0 0 0 chrX 134251302 134251326 -32398970 + (TTTTTG)n Simple_repeat Simple_repeat 5 28 0 3 1609 6239 115 8 11 chrX 134252125 134253086 -32397210 - RMER17B LTR ERVK 0 958 1 3 1609 23 0 0 0 chrX 134253198 134253221 -32397075 + AT_rich Low_complexity Low_complexity 1 23 0 3 1609 382 230 11 11 chrX 134254059 134254147 -32396149 + RSINE1 SINE B4 78 165 0 3 1609 260 230 40 9 chrX 134254185 134254302 -32395994 + L1M2 LINE L1 5152 5275 -871 3 1609 494 302 67 8 chrX 134254372 134254612 -32395684 + L1M4 LINE L1 5354 5607 -577 3 1609 479 308 53 0 chrX 134254691 134254899 -32395397 + L1M4 LINE L1 5602 5820 -354 3 1609 531 335 40 0 chrX 134255145 134255321 -32394975 - MER58A DNA MER1_type 0 224 42 3 1609 1255 251 130 132 chrX 134255340 134256061 -32394235 - RMER6D LTR ERVK 0 720 1 3 1609 332 319 0 52 chrX 134256264 134256360 -32393936 - ID_B1 SINE B4 -53 171 81 3 1609 7511 68 1 0 chrX 134256383 134257349 -32392947 + L1Md_F2 LINE L1 4686 5652 -231 3 1609 2932 26 0 0 chrX 134257348 134257688 -32392608 + L1Md_F2 LINE L1 5807 6146 -436 3 1609 1521 12 0 0 chrX 134257685 134257855 -32392441 + L1Md_A LINE L1 5417 5586 -297 3 1609 8985 4 0 0 chrX 134257855 134258850 -32391446 + L1Md_A LINE L1 5587 6581 -1 3 1609 1810 77 11 8 chrX 134258839 134259100 -32391196 + L1Md_F2 LINE L1 6321 6582 0 3 1609 305 415 74 30 chrX 134259665 134259961 -32390335 + L1MEd LINE L1 242 550 -5569 3 1609 1957 137 3 65 chrX 134260041 134260392 -32389904 - ORR1A4 LTR MaLR 0 329 1 3 1609 180 0 0 0 chrX 134260430 134260450 -32389846 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 1609 506 300 103 50 chrX 134260893 134261251 -32389045 + L1ME1 LINE L1 5495 5871 -308 3 1609 591 135 0 0 chrX 134261252 134261348 -32388948 + (GGGAGA)n Simple_repeat Simple_repeat 2 97 0 3 1609 332 231 121 57 chrX 134261393 134261517 -32388779 + MT2A LTR ERVL 1 132 -401 3 1609 966 249 196 13 chrX 134261520 134261867 -32388429 + MT2A LTR ERVL 85 568 -33 3 1609 29 0 0 0 chrX 134261867 134261896 -32388400 + AT_rich Low_complexity Low_complexity 1 29 0 3 1609 7795 199 50 30 chrX 134261898 134264895 -32385401 + Lx7 LINE L1 4617 7696 0 4 1609 1069 269 178 35 chrX 134265532 134266298 -32383998 - L1MB8 LINE L1 -6 6172 5298 4 1609 9802 88 12 17 chrX 134266303 134268504 -32381792 - Lx3_Mus LINE L1 0 7009 4823 4 1609 1135 72 0 0 chrX 134268539 134268678 -32381618 + B1_Mus1 SINE Alu 2 140 -8 4 1609 189 0 0 0 chrX 134268678 134268699 -32381597 + (CAAAC)n Simple_repeat Simple_repeat 2 22 0 4 1609 395 272 128 21 chrX 134268758 134268946 -32381350 - L1MB8 LINE L1 -902 5244 5037 4 1609 499 296 65 13 chrX 134269062 134269216 -32381080 - RSINE1 SINE B4 -2 163 2 4 1609 1165 73 0 0 chrX 134269461 134269611 -32380685 - L1_Mus2 LINE L1 -160 6406 6257 4 1609 825 276 81 14 chrX 134269689 134269972 -32380324 - Lx6 LINE L1 -4 7456 7155 4 1609 2940 208 56 10 chrX 134270115 134270718 -32379578 - Lx6 LINE L1 -312 7148 6518 4 1609 252 0 0 0 chrX 134270745 134270773 -32379523 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1609 769 179 39 16 chrX 134270773 134270955 -32379341 + Lx6 LINE L1 5780 5965 -1495 4 1609 1040 298 98 76 chrX 134271172 134272197 -32378099 - L1MB8 LINE L1 -1371 4775 3728 4 1609 6669 176 38 25 chrX 134273685 134274992 -32375304 - Lx2B LINE L1 -5 6995 5671 4 1609 1020 78 43 0 chrX 134274992 134275133 -32375163 + B1_Mus1 SINE Alu 2 148 0 4 1609 203 79 26 0 chrX 134275143 134275181 -32375115 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1609 420 152 0 0 chrX 134275228 134275287 -32375009 - Lx3B LINE L1 -1291 5682 5624 4 1609 1046 80 0 0 chrX 134275280 134275418 -32374878 + L1_Mm LINE L1 5370 5507 -376 4 1609 998 256 67 18 chrX 134277299 134277581 -32372715 - Lx8 LINE L1 -478 6995 6700 4 1609 1077 213 114 17 chrX 134277597 134277925 -32372371 + Lx7 LINE L1 5553 5913 -1783 4 1609 33 25 0 0 chrX 134278586 134278626 -32371670 + AT_rich Low_complexity Low_complexity 1 40 0 4 1609 23 0 0 0 chrX 134278658 134278681 -32371615 + AT_rich Low_complexity Low_complexity 1 23 0 4 1609 312 207 15 104 chrX 134278699 134278834 -32371462 - Lx9 LINE L1 -42 7602 7480 4 1609 1171 305 113 36 chrX 134278878 134279409 -32370887 - Lx9 LINE L1 -267 7377 6806 4 1609 1210 272 25 12 chrX 134279570 134279890 -32370406 - Lx9 LINE L1 -850 6794 6471 4 1609 580 215 14 29 chrX 134280010 134280149 -32370147 - Lx9 LINE L1 -1660 5984 5848 4 1609 1226 176 44 31 chrX 134280164 134280393 -32369903 + RMER19B LTR ERVK 665 896 -6 4 1609 2330 257 76 90 chrX 134280402 134281268 -32369028 - Lx9 LINE L1 -1357 4490 3590 4 1609 2230 78 30 36 chrX 134281268 134281600 -32368696 - L1Md_F2 LINE L1 -6 6576 6247 4 1609 2330 257 76 90 chrX 134281600 134282003 -32368293 - Lx9 LINE L1 -2258 3589 3240 4 1609 6051 98 12 5 chrX 134282064 134282928 -32367368 - L1_Mus4 LINE L1 -24 6612 5743 4 1609 3496 161 48 10 chrX 134282926 134283858 -32366438 - L1VL4 LINE L1 -2393 1166 204 4 1609 2602 263 50 22 chrX 134283870 134284348 -32365948 - Lx9 LINE L1 -2595 3252 2755 4 1609 189 0 0 0 chrX 134284348 134284369 -32365927 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 4 1609 2602 263 50 22 chrX 134284369 134284452 -32365844 - Lx9 LINE L1 -3093 2754 2674 4 1609 396 0 0 0 chrX 134284452 134284496 -32365800 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1609 2602 263 50 22 chrX 134284496 134284960 -32365336 - Lx9 LINE L1 -3174 2673 2199 4 1609 1446 235 44 33 chrX 134284968 134285652 -32364644 - Lx9 LINE L1 -4251 1596 903 4 1609 441 0 0 0 chrX 134286107 134286156 -32364140 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1609 2022 169 51 0 chrX 134286159 134286513 -32363783 - ORR1C2 LTR MaLR -12 372 1 4 1609 21 36 0 0 chrX 134286995 134287023 -32363273 + AT_rich Low_complexity Low_complexity 1 28 0 4 1609 25 31 0 0 chrX 134288105 134288137 -32362159 + AT_rich Low_complexity Low_complexity 1 32 0 4 1609 246 345 69 113 chrX 134290222 134290513 -32359783 - MamSINE1 SINE tRNA -10 280 3 4 1609 220 136 22 22 chrX 134291124 134291169 -32359127 - L2a LINE L2 0 3426 3382 4 1609 2308 166 78 27 chrX 134291384 134291872 -32358424 - Lx LINE L1 -8 6646 6134 4 1609 404 244 5 0 chrX 134291890 134291979 -32358317 - ID_B1 SINE B4 -191 101 9 4 1609 4485 56 0 7 chrX 134292065 134292638 -32357658 - L1_Mus1 LINE L1 -1 6566 5998 4 1609 4335 64 4 0 chrX 134292640 134293314 -32356982 + L1_Mus1 LINE L1 5312 5988 -579 4 1609 4429 147 16 12 chrX 134293314 134294076 -32356220 - Lx2 LINE L1 -3 6994 6230 4 1609 679 304 16 0 chrX 134294085 134294269 -32356027 + B3 SINE B2 3 189 -27 4 1609 552 15 0 0 chrX 134295175 134295240 -32355056 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1609 200 352 0 0 chrX 134295368 134295430 -32354866 + MIRm SINE MIR 190 261 -15 4 1609 913 162 201 27 chrX 134295453 134295637 -32354659 - B3 SINE B2 0 216 1 4 1609 742 28 18 0 chrX 134295792 134295901 -32354395 - L1Md_F3 LINE L1 -2 6582 6472 4 1609 232 284 37 61 chrX 134295945 134296060 -32354236 - MIRm SINE MIR -23 245 113 4 1609 252 0 0 0 chrX 134296337 134296365 -32353931 + (TC)n Simple_repeat Simple_repeat 1 28 0 4 1609 411 113 0 0 chrX 134296365 134296426 -32353870 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 1609 1028 316 135 17 chrX 134296847 134297440 -32352856 - Lx8 LINE L1 -2 7471 6809 4 1609 241 338 37 12 chrX 134297997 134298078 -32352218 - L2b LINE L2 -218 3157 3075 4 1609 568 163 0 11 chrX 134299037 134299130 -32351166 - ORR1D1 LTR MaLR -93 281 190 4 1609 587 204 128 13 chrX 134299148 134299297 -32350999 - Lx6 LINE L1 -56 7404 7239 4 1609 2559 130 53 7 chrX 134299599 134300017 -32350279 + Lx3C LINE L1 6538 6974 -2 4 1609 396 0 0 0 chrX 134300024 134300068 -32350228 + (CTA)n Simple_repeat Simple_repeat 1 44 0 4 1609 31 58 0 0 chrX 134300594 134300646 -32349650 + AT_rich Low_complexity Low_complexity 1 52 0 4 1609 1299 79 0 0 chrX 134301255 134301432 -32348864 + (TTTTC)n Simple_repeat Simple_repeat 3 179 0 4 1609 360 327 12 44 chrX 134302189 134302349 -32347947 - L2a LINE L2 -8 3418 3264 4 1609 4485 67 11 33 chrX 134302821 134303435 -32346861 - L1_Mus2 LINE L1 0 6566 5966 4 1609 1109 36 36 0 chrX 134304217 134304357 -32345939 - B1_Mm SINE Alu -1 146 2 4 1609 1020 333 85 44 chrX 134304367 134304826 -32345470 + RCHARR1 DNA MER1_type 5 482 -492 4 1609 572 185 80 100 chrX 134304843 134304993 -32345303 - B1_Mur1 SINE Alu -2 147 1 4 1609 1473 264 45 8 chrX 134305037 134305525 -32344771 + L1M2 LINE L1 3603 4108 -2035 4 1609 556 296 32 7 chrX 134305555 134305774 -32344522 + L1_Rod LINE L1 4624 4879 -998 4 1609 1135 306 74 75 chrX 134305779 134306388 -32343908 - RLTR18 LTR ERVK 0 616 9 4 1609 381 219 73 33 chrX 134306407 134306558 -32343738 + L1M2 LINE L1 5145 5301 -842 4 1609 616 256 76 66 chrX 134306609 134306916 -32343380 + L1M2 LINE L1 5440 5782 -518 4 1609 2864 301 68 38 chrX 134307000 134308065 -32342231 + Lx8 LINE L1 6142 7238 -235 4 1609 30 45 0 0 chrX 134309841 134309885 -32340411 + AT_rich Low_complexity Low_complexity 1 44 0 4 1609 2039 47 4 0 chrX 134309885 134310138 -32340158 - L1Md_F2 LINE L1 -14 6568 6315 4 1609 284 328 89 40 chrX 134310827 134310951 -32339345 + MIRc SINE MIR 33 162 -106 4 1609 2903 57 42 12 chrX 134311109 134311518 -32338778 - BGLII LTR ERVK 0 421 1 4 1609 204 220 40 0 chrX 134311639 134311689 -32338607 + (TATATG)n Simple_repeat Simple_repeat 6 57 0 4 1609 723 177 24 65 chrX 134313668 134313837 -32336459 - B2_Mm2 SINE B2 -31 164 3 4 1609 463 266 146 0 chrX 134314609 134314835 -32335461 - L1MA8 LINE L1 -1 6290 6032 4 1609 1286 70 0 0 chrX 134315262 134315433 -32334863 + L1_Mus2 LINE L1 6396 6566 0 4 1609 3247 48 2 2 chrX 134315795 134316191 -32334105 + MTA_Mm LTR MaLR 1 396 0 4 1609 202 314 0 0 chrX 134316542 134316593 -32333703 + MIR3 SINE MIR 130 180 -28 4 1609 287 306 53 68 chrX 134318086 134318219 -32332077 + LTR86B2 LTR ERVL 102 232 -255 4 1609 4180 76 25 18 chrX 134318261 134318866 -32331430 - L1_Mus4 LINE L1 -5 6631 6023 4 1609 241 419 54 7 chrX 134318887 134319036 -32331260 + LTR86B2 LTR ERVL 251 406 -81 4 1609 414 364 14 33 chrX 134319786 134320012 -32330284 - MIR SINE MIR -34 234 12 4 1609 456 308 24 36 chrX 134320190 134320355 -32329941 + RSINE1 SINE B4 3 165 0 4 1609 201 154 0 0 chrX 134320355 134320394 -32329902 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1609 22 0 0 0 chrX 134320410 134320432 -32329864 + AT_rich Low_complexity Low_complexity 1 22 0 4 1609 281 270 101 83 chrX 134320480 134320589 -32329707 + RSINE1 SINE B4 55 165 0 4 1609 497 16 16 0 chrX 134323545 134323607 -32326689 + (TG)n Simple_repeat Simple_repeat 1 63 0 4 1609 25 51 0 0 chrX 134323915 134323954 -32326342 + AT_rich Low_complexity Low_complexity 1 39 0 4 1609 185 206 119 60 chrX 134324615 134324682 -32325614 - L2b LINE L2 -1 3374 3304 4 1609 422 390 11 73 chrX 134324950 134325141 -32325155 - B4A SINE B4 -112 180 2 4 1609 1541 118 36 4 chrX 134325255 134325502 -32324794 - L1_Mus4 LINE L1 -4 6632 6378 4 1609 7722 122 12 1 chrX 134325503 134327112 -32323184 - L1_Mus4 LINE L1 -443 6193 4564 4 1609 466 252 27 23 chrX 134327180 134327402 -32322894 - L1M3 LINE L1 -741 5430 5203 4 1609 852 225 55 0 chrX 134328282 134328482 -32321814 + Lx7 LINE L1 7153 7363 -333 4 1609 239 271 23 46 chrX 134328485 134328659 -32321637 + (TTTG)n Simple_repeat Simple_repeat 2 171 0 4 1609 26 50 0 0 chrX 134328974 134329014 -32321282 + AT_rich Low_complexity Low_complexity 1 40 0 4 1609 7170 104 32 1 chrX 134330242 134330709 -32319587 + L1_Mus3 LINE L1 5306 5783 -100 4 1609 269 26 26 0 chrX 134330709 134330747 -32319549 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1609 7170 87 49 2 chrX 134330747 134331564 -32318732 + L1_Mus3 LINE L1 5784 6636 -2 4 1609 283 271 139 29 chrX 134331624 134331761 -32318535 - Lx9 LINE L1 -178 7466 7315 4 1609 661 303 24 9 chrX 134332100 134332313 -32317983 + B3 SINE B2 1 216 0 4 1609 608 294 12 6 chrX 134335528 134335696 -32314600 - Tigger7 DNA MER2_type -2321 170 2 4 1609 405 0 0 0 chrX 134335929 134335974 -32314322 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1609 249 312 168 14 chrX 134336055 134336144 -32314152 - L2a LINE L2 0 3426 3329 4 1609 389 54 18 0 chrX 134336144 134336200 -32314096 + (CAA)n Simple_repeat Simple_repeat 2 58 0 4 1609 249 312 168 14 chrX 134336200 134336253 -32314043 - L2a LINE L2 -98 3328 3262 4 1609 216 0 0 0 chrX 134337130 134337154 -32313142 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1609 3665 62 25 10 chrX 134337487 134337636 -32312660 + L1Md_F2 LINE L1 5091 5234 -649 4 1609 444 19 0 0 chrX 134337636 134337689 -32312607 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 1609 3665 62 25 10 chrX 134337689 134338028 -32312268 + L1Md_F2 LINE L1 5235 5585 -298 4 1609 7692 62 3 4 chrX 134338028 134339021 -32311275 + L1Md_F2 LINE L1 5587 6578 -4 4 1609 468 0 0 0 chrX 134339211 134339263 -32311033 + (TC)n Simple_repeat Simple_repeat 2 53 0 4 1609 204 40 0 0 chrX 134339263 134339287 -32311009 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1609 221 294 121 43 chrX 134339427 134339602 -32310694 + MIR SINE MIR 69 252 -16 5 1609 310 176 12 12 chrX 134341250 134341336 -32308960 + CT-rich Low_complexity Low_complexity 2 87 0 5 1609 399 56 0 0 chrX 134341336 134341390 -32308906 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1609 202 367 31 15 chrX 134341512 134341642 -32308654 - MIRb SINE MIR -25 243 112 5 1609 444 37 0 0 chrX 134341917 134341971 -32308325 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 1609 287 262 0 0 chrX 134341972 134342052 -32308244 + (TAGA)n Simple_repeat Simple_repeat 1 80 0 5 1609 3937 39 0 22 chrX 134342122 134342645 -32307651 - L1Md_F2 LINE L1 0 6582 6100 5 1609 4164 62 9 11 chrX 134342974 134343525 -32306771 - L1Md_F2 LINE L1 -8 6574 6025 5 1609 192 380 45 18 chrX 134343791 134343901 -32306395 - MIR SINE MIR -64 144 32 5 1609 614 315 32 18 chrX 134344124 134344344 -32305952 - MIR SINE MIR -32 230 8 5 1609 21 36 0 0 chrX 134344732 134344760 -32305536 + AT_rich Low_complexity Low_complexity 1 28 0 5 1609 191 32 0 61 chrX 134345058 134345091 -32305205 + (CAAAAA)n Simple_repeat Simple_repeat 4 34 0 5 1609 513 0 0 0 chrX 134346228 134346285 -32304011 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 1609 23 33 0 0 chrX 134347624 134347654 -32302642 + AT_rich Low_complexity Low_complexity 1 30 0 5 1609 251 312 12 0 chrX 134348619 134348699 -32301597 + ID4 SINE ID 2 82 -1 5 1609 229 217 33 16 chrX 134348736 134348797 -32301499 + L1_Rod LINE L1 5563 5624 -223 5 1610 500 347 30 5 chrX 134349246 134349446 -32300850 - MIR SINE MIR 0 262 58 5 1610 262 238 139 122 chrX 134349606 134349721 -32300575 - MER5A DNA MER1_type -14 175 59 5 1610 992 260 50 50 chrX 134349700 134349979 -32300317 - 7SK RNA RNA -52 279 1 5 1610 208 349 22 34 chrX 134350311 134350400 -32299896 + MIRb SINE MIR 5 92 -176 5 1610 483 205 44 9 chrX 134352504 134352617 -32297679 - B3 SINE B2 -9 207 91 5 1610 509 257 138 0 chrX 134352841 134352993 -32297303 + B3 SINE B2 44 216 0 5 1610 200 250 0 19 chrX 134353011 134353064 -32297232 + CT-rich Low_complexity Low_complexity 1 52 0 5 1610 1118 253 110 24 chrX 134353534 134353862 -32296434 - ORR1D2 LTR MaLR 0 370 15 5 1610 359 370 79 64 chrX 134353956 134354158 -32296138 - B4 SINE B4 -16 276 72 5 1610 7052 31 5 0 chrX 134354427 134355264 -32295032 + L1Md_F2 LINE L1 5740 6580 -2 5 1610 181 273 0 0 chrX 134355288 134355332 -32294964 - MIRm SINE MIR 0 276 233 5 1610 258 340 116 12 chrX 134356141 134356305 -32293991 - MIR SINE MIR -3 259 79 5 1610 318 352 0 9 chrX 134356432 134356538 -32293758 - MER5B DNA MER1_type -73 105 1 5 1610 251 71 24 0 chrX 134356884 134356926 -32293370 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 5 1610 701 309 86 20 chrX 134356935 134357285 -32293011 - Lx8 LINE L1 -241 7232 6860 5 1610 520 214 0 10 chrX 134357287 134357391 -32292905 - ORR1D2 LTR MaLR 0 370 268 5 1610 1702 288 63 51 chrX 134357391 134358225 -32292071 - L1_Mur3 LINE L1 -1573 4307 3477 5 1610 942 169 0 7 chrX 134358225 134358374 -32291922 - B1_Mur3 SINE Alu -1 148 1 5 1610 1418 304 62 33 chrX 134358374 134358461 -32291835 - L1_Mur3 LINE L1 -2646 3494 3411 5 1610 656 234 41 34 chrX 134358482 134358628 -32291668 + B1_Mur1 SINE Alu 3 149 0 5 1610 543 172 24 8 chrX 134358644 134358767 -32291529 - L1_Mur3 LINE L1 -2537 3343 3219 5 1610 487 279 39 116 chrX 134358802 134358965 -32291331 - Lx5 LINE L1 0 7050 6904 5 1610 203 0 37 0 chrX 134358965 134358992 -32291304 + (CCA)n Simple_repeat Simple_repeat 2 29 0 5 1610 487 279 39 116 chrX 134358992 134359087 -32291209 - Lx5 LINE L1 -147 6903 6812 5 1610 309 109 0 0 chrX 134359089 134359135 -32291161 + (CAGA)n Simple_repeat Simple_repeat 1 46 0 5 1610 5899 174 57 19 chrX 134359168 134360450 -32289846 - Lx5 LINE L1 -213 6837 5490 5 1610 1090 95 0 0 chrX 134360450 134360597 -32289699 + B1_Mus1 SINE Alu 2 148 0 5 1610 399 89 0 0 chrX 134360597 134360653 -32289643 + (A)n Simple_repeat Simple_repeat 1 56 0 5 1610 2488 100 59 0 chrX 134360732 134361071 -32289225 - RLTR10D LTR ERVK 0 359 1 5 1610 6137 96 3 37 chrX 134361073 134361973 -32288323 - IAP-d-int LTR ERVK 0 6542 5673 5 1610 1974 202 0 33 chrX 134361960 134362349 -32287947 - IAP-d-int LTR ERVK -1160 5382 5007 5 1610 694 196 20 0 chrX 134362359 134362507 -32287789 - IAP-d-int LTR ERVK -6045 497 347 5 1610 1245 69 5 84 chrX 134362501 134362691 -32287605 - IAP-d-int LTR ERVK -6365 177 3 5 1610 2596 77 59 0 chrX 134362693 134363032 -32287264 - RLTR10D LTR ERVK 0 359 1 5 1610 538 351 116 22 chrX 134364874 134365288 -32285008 - LTR86B1 LTR ERVL -36 457 5 5 1610 238 174 45 27 chrX 134365571 134365683 -32284613 + (TA)n Simple_repeat Simple_repeat 2 115 0 5 1610 314 289 92 10 chrX 134365778 134365876 -32284420 - Lx9 LINE L1 -1149 6495 6390 5 1610 924 238 93 8 chrX 134366018 134366255 -32284041 + Lx5 LINE L1 6791 7047 -3 5 1610 4123 246 85 86 chrX 134366322 134367943 -32282353 - Lx9 LINE L1 -1670 5974 4397 5 1610 2310 169 31 22 chrX 134367943 134368360 -32281936 + MTC LTR MaLR 1 421 0 5 1610 4123 244 84 88 chrX 134368360 134368424 -32281872 - Lx9 LINE L1 -1451 4396 4300 5 1610 405 0 0 0 chrX 134368424 134368469 -32281827 + (TTTTG)n Simple_repeat Simple_repeat 3 47 0 5 1610 4123 244 84 88 chrX 134368469 134368928 -32281368 - Lx9 LINE L1 -1548 4299 3794 5 1610 1910 232 24 78 chrX 134369872 134370410 -32279886 + Lx6 LINE L1 6952 7460 0 5 1610 439 326 78 44 chrX 134370424 134370629 -32279667 + B4A SINE B4 81 292 0 5 1610 585 0 0 0 chrX 134371330 134371395 -32278901 + (GA)n Simple_repeat Simple_repeat 2 66 0 5 1610 1075 196 63 5 chrX 134374276 134374481 -32275815 + Lx5 LINE L1 6816 7032 -18 5 1610 210 37 0 0 chrX 134374481 134374508 -32275788 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 5 1610 813 286 19 50 chrX 134375168 134375368 -32274928 - MLT1D LTR MaLR 0 505 312 5 1610 842 161 214 5 chrX 134375368 134375555 -32274741 + URR1A DNA MER1_type 1 226 0 5 1610 813 286 19 50 chrX 134375555 134375615 -32274681 - MLT1D LTR MaLR -194 311 253 5 1610 229 350 38 8 chrX 134376658 134376783 -32273513 + MIRc SINE MIR 5 138 -130 5 1610 288 130 0 0 chrX 134376786 134376832 -32273464 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1610 1357 152 63 0 chrX 134376933 134377170 -32273126 - L1_Mur2 LINE L1 -1893 3984 3733 5 1610 1067 193 10 10 chrX 134377170 134377374 -32272922 - ORR1B1 LTR MaLR -180 214 11 5 1610 8910 98 55 7 chrX 134377558 134379090 -32271206 - Lx3_Mus LINE L1 0 7009 5409 5 1610 223 322 173 37 chrX 134379117 134379388 -32270908 - L2 LINE L2 -1034 2385 2078 5 1610 273 342 0 0 chrX 134379442 134379518 -32270778 + B3A SINE B2 1 76 -122 5 1610 857 147 29 0 chrX 134379570 134379706 -32270590 - Lx5 LINE L1 -485 6565 6426 5 1610 198 361 69 0 chrX 134379887 134379959 -32270337 + MIRc SINE MIR 76 152 -116 5 1610 573 204 0 84 chrX 134380532 134380698 -32269598 - Lx7 LINE L1 -251 7445 7294 5 1610 270 189 0 19 chrX 134380859 134380913 -32269383 - L1_Mur1 LINE L1 -312 5574 5522 5 1610 315 0 0 0 chrX 134380957 134380992 -32269304 + (TTAA)n Simple_repeat Simple_repeat 4 38 0 5 1610 814 199 90 6 chrX 134380993 134381160 -32269136 - Lx4A LINE L1 -4 7054 6874 5 1610 370 262 46 9 chrX 134381189 134381297 -32268999 - Lx6 LINE L1 -81 7379 7268 5 1610 273 57 0 0 chrX 134381332 134381367 -32268929 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1610 331 356 162 8 chrX 134382113 134382198 -32268098 - LTR16A1 LTR ERVL -14 442 345 5 1610 210 37 0 0 chrX 134382198 134382225 -32268071 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 5 1610 331 356 162 8 chrX 134382225 134382374 -32267922 - LTR16A1 LTR ERVL -112 344 173 5 1610 207 337 103 22 chrX 134384630 134384779 -32265517 + MIRb SINE MIR 8 170 -92 5 1610 965 129 0 24 chrX 134384800 134384967 -32265329 + Lx3B LINE L1 6808 6970 -3 5 1610 1589 84 0 0 chrX 134384986 134385200 -32265096 + L1_Mus1 LINE L1 6354 6567 0 5 1610 266 0 29 0 chrX 134385210 134385244 -32265052 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1610 3325 30 15 10 chrX 134385751 134386161 -32264135 + L1Md_F3 LINE L1 6172 6583 -1 5 1610 552 30 0 0 chrX 134386943 134387009 -32263287 + (TG)n Simple_repeat Simple_repeat 2 67 0 5 1610 462 219 0 0 chrX 134387141 134387246 -32263050 + T-rich Low_complexity Low_complexity 1 105 0 5 1610 595 321 36 0 chrX 134387246 134387414 -32262882 - B4A SINE B4 -105 187 14 5 1610 243 0 0 0 chrX 134387484 134387511 -32262785 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1610 808 342 47 22 chrX 134387656 134387876 -32262420 + B4 SINE B4 8 230 -62 5 1610 2659 71 3 0 chrX 134387876 134388230 -32262066 + L1Md_T LINE L1 6226 6580 -2 5 1610 808 342 47 22 chrX 134388230 134388287 -32262009 + B4 SINE B4 231 291 -1 5 1610 1411 34 0 0 chrX 134390998 134391174 -32259122 - L1Md_A LINE L1 -1 6581 6406 5 1610 886 166 207 5 chrX 134391226 134391414 -32258882 + URR1A DNA MER1_type 1 226 0 5 1610 193 209 47 0 chrX 134392317 134392360 -32257936 - L2a LINE L2 -4 3422 3378 5 1610 311 297 240 6 chrX 134392699 134392874 -32257422 + B3A SINE B2 1 216 0 5 1610 2328 183 143 24 chrX 134392927 134393544 -32256752 + RMER6C LTR ERVK 1 690 0 5 1610 357 274 85 8 chrX 134393587 134393705 -32256591 + MLT1B LTR MaLR 25 151 -239 5 1610 309 267 88 44 chrX 134394179 134394316 -32255980 - LTR79 LTR ERVL -18 509 367 5 1610 216 97 0 0 chrX 134395666 134395697 -32254599 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 5 1610 332 344 65 8 chrX 134395761 134396007 -32254289 + MER112 DNA MER1_type 1 260 -1 5 1610 239 303 30 0 chrX 134396065 134396131 -32254165 + MER58B DNA MER1_type 262 329 -12 5 1610 4376 107 40 0 chrX 134398105 134398222 -32252074 - Lx LINE L1 0 6654 6538 5 1610 213 39 0 0 chrX 134398222 134398248 -32252048 + (CCCA)n Simple_repeat Simple_repeat 4 29 0 5 1610 4376 107 40 0 chrX 134398248 134398773 -32251523 - Lx LINE L1 -117 6537 5987 5 1610 469 236 122 5 chrX 134399116 134399312 -32250984 - L1MA7 LINE L1 0 6291 6073 5 1610 246 303 109 9 chrX 134399368 134399478 -32250818 - MIRb SINE MIR 0 268 148 5 1610 462 79 0 0 chrX 134399947 134400010 -32250286 + (TCTG)n Simple_repeat Simple_repeat 4 66 0 5 1610 198 0 0 0 chrX 134400976 134400998 -32249298 + (GTTTG)n Simple_repeat Simple_repeat 1 22 0 5 1610 403 145 24 0 chrX 134401915 134401998 -32248298 + (TA)n Simple_repeat Simple_repeat 2 86 0 5 1610 973 313 49 68 chrX 134402013 134402424 -32247872 + MER47B DNA MER2_type 7 409 -9 6 1610 224 211 35 0 chrX 134402426 134402483 -32247813 + (TA)n Simple_repeat Simple_repeat 1 59 0 6 1610 491 301 17 51 chrX 134402602 134402777 -32247519 - MLT1A0 LTR MaLR -196 169 1 6 1610 567 308 66 109 chrX 134402814 134403208 -32247088 + MTEa LTR MaLR 1 377 -2 6 1610 387 268 12 0 chrX 134403243 134403325 -32246971 - BC1_Mm scRNA scRNA -64 88 6 6 1610 410 116 0 14 chrX 134403873 134403943 -32246353 + Lx7 LINE L1 7628 7696 0 6 1610 1095 107 6 0 chrX 134404753 134404912 -32245384 - B2_Mm1t SINE B2 -28 165 6 6 1610 974 109 6 28 chrX 134404912 134405091 -32245205 + Lx LINE L1 6478 6652 -2 6 1610 197 278 19 0 chrX 134405530 134405584 -32244712 - L2c LINE L2 -89 3298 3244 6 1610 24 77 0 0 chrX 134405774 134405826 -32244470 + AT_rich Low_complexity Low_complexity 1 52 0 6 1610 248 126 63 49 chrX 134405831 134405973 -32244323 + (TATAA)n Simple_repeat Simple_repeat 1 144 0 6 1610 339 106 65 61 chrX 134406097 134406368 -32243928 + (TA)n Simple_repeat Simple_repeat 1 272 0 6 1610 186 68 53 74 chrX 134406395 134406490 -32243806 + (TA)n Simple_repeat Simple_repeat 1 93 0 6 1610 3997 208 61 2 chrX 134407398 134408204 -32242092 - Lx5 LINE L1 -2 7048 6196 6 1610 7747 38 0 5 chrX 134408218 134409155 -32241141 - L1Md_F2 LINE L1 0 6582 5651 6 1610 3649 175 31 9 chrX 134409283 134410141 -32240155 - Lx2B LINE L1 -677 6323 5444 6 1610 248 0 31 0 chrX 134410141 134410173 -32240123 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 1610 3196 173 35 2 chrX 134410173 134410355 -32239941 - Lx2B LINE L1 -434 5443 5257 6 1610 4830 197 209 12 chrX 134410348 134411070 -32239226 - Lx2B LINE L1 -3061 2819 2053 6 1610 198 0 0 0 chrX 134411070 134411092 -32239204 + (TTG)n Simple_repeat Simple_repeat 2 23 0 6 1610 4830 185 147 8 chrX 134411092 134411783 -32238513 - Lx2B LINE L1 -3828 2052 1140 6 1610 1036 248 78 7 chrX 134411778 134412062 -32238234 + Lx2B LINE L1 6687 6990 -10 6 1610 2170 196 62 76 chrX 134412071 134412689 -32237607 - Lx2B LINE L1 -5937 1149 541 6 1610 7478 40 0 0 chrX 134413385 134414279 -32236017 - L1Md_T LINE L1 0 6582 5689 6 1610 21 36 0 0 chrX 134414442 134414470 -32235826 + AT_rich Low_complexity Low_complexity 1 28 0 6 1610 387 305 61 30 chrX 134414526 134414658 -32235638 + ID_B1 SINE B4 80 215 -9 6 1610 286 246 31 0 chrX 134414670 134414735 -32235561 + ID4_ SINE ID 3 69 -14 6 1610 183 42 0 0 chrX 134416049 134416073 -32234223 + (TTG)n Simple_repeat Simple_repeat 1 24 0 6 1610 393 75 0 0 chrX 134416487 134416540 -32233756 + (A)n Simple_repeat Simple_repeat 1 53 0 6 1610 754 188 150 0 chrX 134418569 134418779 -32231517 - Lx3C LINE L1 -5 6995 6736 6 1610 1277 133 0 0 chrX 134418832 134419035 -32231261 + L1_Mur2 LINE L1 4726 4928 -949 6 1610 458 284 0 29 chrX 134420231 134420369 -32229927 + MER94 DNA AcHobo 1 134 0 6 1610 773 208 0 7 chrX 134420675 134420820 -32229476 + B1_Mur4 SINE Alu 1 144 -6 6 1610 21 0 0 0 chrX 134420942 134420963 -32229333 + AT_rich Low_complexity Low_complexity 1 21 0 6 1610 1007 230 47 40 chrX 134421066 134421328 -32228968 + ORR1D1 LTR MaLR 1 273 -86 6 1610 21 0 0 0 chrX 134421415 134421436 -32228860 + GC_rich Low_complexity Low_complexity 1 21 0 6 1610 961 245 53 26 chrX 134421674 134421950 -32228346 + Lx6 LINE L1 7180 7433 -27 6 1610 3387 28 5 0 chrX 134422072 134422466 -32227830 - MTA_Mm LTR MaLR 0 396 1 6 1610 668 307 5 29 chrX 134422485 134422690 -32227606 - B3 SINE B2 -16 200 1 6 1610 888 129 6 28 chrX 134422741 134422917 -32227379 - Lx3A LINE L1 -1 6980 6809 6 1610 360 280 75 29 chrX 134424391 134424564 -32225732 - Kanga1 DNA Tc2 -3 1742 1562 6 1610 1580 209 33 46 chrX 134424723 134425090 -32225206 - ORR1D2 LTR MaLR 0 370 9 6 1610 201 255 0 21 chrX 134425110 134425158 -32225138 + MIRc SINE MIR 117 163 -105 6 1610 27 0 0 0 chrX 134425402 134425429 -32224867 + AT_rich Low_complexity Low_complexity 1 27 0 6 1610 358 304 34 25 chrX 134425870 134425988 -32224308 - MIRm SINE MIR -115 161 43 6 1610 265 305 38 50 chrX 134426737 134426870 -32223426 + MIRb SINE MIR 68 208 -60 6 1610 1564 47 19 14 chrX 134426944 134427158 -32223138 - L1Md_F3 LINE L1 0 6584 6370 6 1610 210 143 0 0 chrX 134427195 134427230 -32223066 + (TA)n Simple_repeat Simple_repeat 1 35 0 6 1610 495 145 0 0 chrX 134427541 134427624 -32222672 + (TTC)n Simple_repeat Simple_repeat 3 85 0 6 1610 23 0 0 0 chrX 134428000 134428023 -32222273 + AT_rich Low_complexity Low_complexity 1 23 0 6 1610 657 304 41 44 chrX 134429226 134429591 -32220705 + L1M5 LINE L1 3364 3727 -2419 6 1610 235 167 30 0 chrX 134429622 134429688 -32220608 + CT-rich Low_complexity Low_complexity 2 69 0 6 1610 342 138 0 0 chrX 134429678 134429736 -32220560 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 6 1610 937 205 3 9 chrX 134429740 134430055 -32220241 + CT-rich Low_complexity Low_complexity 1 313 0 6 1610 384 167 0 0 chrX 134430086 134430158 -32220138 + CT-rich Low_complexity Low_complexity 2 73 0 6 1610 356 271 45 8 chrX 134430210 134430344 -32219952 - B1F SINE Alu -8 141 3 6 1610 191 313 119 27 chrX 134430827 134430937 -32219359 + L2a LINE L2 3239 3386 -40 6 1610 201 171 0 0 chrX 134432736 134432771 -32217525 + T-rich Low_complexity Low_complexity 1 35 0 6 1610 9066 71 3 4 chrX 134432793 134434722 -32215574 - L1Md_F2 LINE L1 0 6582 4656 6 1610 459 254 29 14 chrX 134434813 134434953 -32215343 + Lx6 LINE L1 7293 7434 -26 6 1610 332 321 9 0 chrX 134435140 134435252 -32215044 + PB1D7 SINE Alu 1 113 -7 6 1610 317 211 51 26 chrX 134436148 134436226 -32214070 - ID4_ SINE ID -3 80 1 6 1610 409 347 94 0 chrX 134436349 134436519 -32213777 + MER5A DNA MER1_type 4 189 0 6 1610 517 308 112 7 chrX 134436733 134437018 -32213278 - L1MA4 LINE L1 -382 5918 5604 6 1610 6094 135 20 10 chrX 134437007 134437025 -32213271 - Lx2 LINE L1 -327 6670 6652 6 1610 1375 127 14 0 chrX 134437025 134437245 -32213051 - Lx2 LINE L1 0 6997 6775 6 1610 6094 139 20 63 chrX 134437245 134438837 -32211459 - Lx2 LINE L1 -346 6651 5160 6 1610 550 313 69 14 chrX 134439019 134439456 -32210840 - L1MA4 LINE L1 -744 5399 4939 6 1610 471 274 59 8 chrX 134439545 134439663 -32210633 + B1_Mur4 SINE Alu 2 125 -25 6 1610 4852 24 0 0 chrX 134440873 134441570 -32208726 - L1Md_T LINE L1 -428 6154 5458 6 1610 1493 57 0 0 chrX 134441570 134441763 -32208533 + L1Md_A LINE L1 6390 6582 0 6 1610 343 395 22 22 chrX 134441851 134442035 -32208261 - MLT1E1 LTR MaLR -9 671 488 6 1610 569 310 91 9 chrX 134442034 134442265 -32208031 - MLT1E1 LTR MaLR -308 346 97 6 1610 225 24 71 0 chrX 134442979 134443021 -32207275 + (TTTG)n Simple_repeat Simple_repeat 1 45 0 6 1610 464 248 59 8 chrX 134443739 134443857 -32206439 + RSINE1 SINE B4 11 134 -31 6 1610 237 239 15 0 chrX 134444102 134444169 -32206127 + Lx6 LINE L1 7354 7421 -39 6 1610 549 0 0 0 chrX 134444209 134444270 -32206026 + (TC)n Simple_repeat Simple_repeat 2 62 0 6 1610 920 92 30 8 chrX 134444270 134444402 -32205894 - B1_Mus2 SINE Alu -12 135 1 6 1610 288 53 0 0 chrX 134445724 134445762 -32204534 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1610 273 57 0 0 chrX 134445809 134445844 -32204452 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1610 324 284 10 93 chrX 134445849 134445917 -32204379 - PB1D7 SINE Alu -26 94 27 6 1610 2768 76 0 13 chrX 134445917 134446302 -32203994 + L1Md_F2 LINE L1 6201 6580 -2 6 1610 324 284 10 93 chrX 134446302 134446330 -32203966 - PB1D7 SINE Alu -94 26 6 6 1610 357 302 109 50 chrX 134446888 134447109 -32203187 + L1ME2 LINE L1 2188 2425 -3741 6 1610 357 353 145 40 chrX 134447454 134447805 -32202491 + L1ME2 LINE L1 5517 5904 -260 6 1610 544 312 67 34 chrX 134448013 134448222 -32202074 - Lx8 LINE L1 -68 7405 7190 6 1610 377 222 0 10 chrX 134448361 134448461 -32201835 + (TATATG)n Simple_repeat Simple_repeat 4 102 0 6 1610 827 61 9 0 chrX 134448461 134448575 -32201721 + (TAGA)n Simple_repeat Simple_repeat 4 118 0 6 1610 588 29 0 0 chrX 134449432 134449502 -32200794 + (TTA)n Simple_repeat Simple_repeat 3 72 0 6 1610 2681 288 39 39 chrX 134449719 134450484 -32199812 - Lx8 LINE L1 -140 7333 6568 6 1610 3340 37 4 128 chrX 134450484 134450982 -32199314 - RLTR10C LTR ERVK 0 436 1 6 1610 2681 288 39 39 chrX 134450982 134451058 -32199238 - Lx8 LINE L1 -906 6567 6492 6 1610 1178 223 165 31 chrX 134451086 134451415 -32198881 - MTD LTR MaLR -15 404 49 6 1610 452 314 78 7 chrX 134451416 134451557 -32198739 + B3 SINE B2 53 203 -13 6 1610 474 132 0 0 chrX 134451648 134451724 -32198572 + (TA)n Simple_repeat Simple_repeat 2 77 0 6 1610 23 0 0 0 chrX 134452682 134452705 -32197591 + AT_rich Low_complexity Low_complexity 1 23 0 6 1610 279 0 0 0 chrX 134453799 134453830 -32196466 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1610 228 335 161 40 chrX 134454031 134454205 -32196091 - MIRb SINE MIR -9 259 65 6 1610 261 0 0 0 chrX 134454600 134454629 -32195667 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 6 1610 285 51 0 0 chrX 134455036 134455075 -32195221 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1610 426 250 29 9 chrX 134455482 134455587 -32194709 + L1M6 LINE L1 1 107 -6389 6 1610 349 312 38 38 chrX 134456534 134456694 -32193602 - Charlie4z DNA MER1_type -7 160 1 6 1610 456 19 0 0 chrX 134456791 134456844 -32193452 + (CAAGA)n Simple_repeat Simple_repeat 1 53 0 6 1610 412 101 0 25 chrX 134457192 134457273 -32193023 + L1_Mus2 LINE L1 6488 6566 0 6 1610 1198 75 0 17 chrX 134457308 134457485 -32192811 + (GAAA)n Simple_repeat Simple_repeat 2 175 0 6 1610 3145 75 5 5 chrX 134457625 134458043 -32192253 + L1_Mus2 LINE L1 6143 6560 -6 6 1610 926 251 32 0 chrX 134458139 134458326 -32191970 + B3 SINE B2 1 193 -23 6 1610 6449 143 32 11 chrX 134458378 134459487 -32190809 - Lx2B LINE L1 0 7000 5869 6 1610 340 111 63 0 chrX 134459488 134459551 -32190745 - L1_Mur2 LINE L1 -511 5366 5300 6 1610 4051 137 70 15 chrX 134459551 134459793 -32190503 + L1_Mur2 LINE L1 4484 4723 -1154 6 1610 257 0 30 0 chrX 134459793 134459826 -32190470 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 6 1610 4051 137 70 15 chrX 134459826 134460316 -32189980 + L1_Mur2 LINE L1 4724 5256 -621 6 1610 1699 176 6 12 chrX 134461934 134462256 -32188040 - Lx4A LINE L1 0 7058 6739 6 1610 478 268 92 0 chrX 134462321 134462463 -32187833 + MER112 DNA MER1_type 4 158 -103 7 1610 547 342 6 31 chrX 134463028 134463191 -32187105 + RSINE1 SINE B4 3 161 -4 7 1610 673 199 69 0 chrX 134463707 134463838 -32186458 + B1_Mur1 SINE Alu 3 142 -7 7 1610 3425 66 49 2 chrX 134465280 134465733 -32184563 + L1_Mus2 LINE L1 6093 6566 0 7 1610 21 0 0 0 chrX 134466606 134466627 -32183669 + AT_rich Low_complexity Low_complexity 1 21 0 7 1610 608 283 36 16 chrX 134466843 134467037 -32183259 - B3A SINE B2 0 198 1 7 1610 369 0 0 0 chrX 134467756 134467797 -32182499 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1610 246 128 0 0 chrX 134467899 134467938 -32182358 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 1610 990 101 17 35 chrX 134467991 134468165 -32182131 + L1_Mus3 LINE L1 6468 6638 0 7 1610 224 120 0 20 chrX 134469126 134469177 -32181119 + (CAAAAA)n Simple_repeat Simple_repeat 3 52 0 7 1610 204 40 0 0 chrX 134469606 134469631 -32180665 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 7 1610 466 268 109 8 chrX 134470236 134470364 -32179932 - ID_B1 SINE B4 -4 220 80 7 1610 532 62 12 12 chrX 134470374 134470456 -32179840 + (TG)n Simple_repeat Simple_repeat 2 83 0 7 1610 617 331 45 34 chrX 134470508 134470777 -32179519 - B4 SINE B4 -18 274 3 7 1610 7644 59 10 1 chrX 134470811 134472328 -32177968 - L1Md_F2 LINE L1 -1 6581 5047 7 1610 34 42 0 0 chrX 134472514 134472562 -32177734 + AT_rich Low_complexity Low_complexity 1 48 0 7 1610 288 0 0 0 chrX 134474652 134474684 -32175612 + (A)n Simple_repeat Simple_repeat 1 32 0 7 1610 243 0 0 0 chrX 134474684 134474711 -32175585 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1610 397 262 40 47 chrX 134474952 134475100 -32175196 + B1F SINE Alu 3 149 0 7 1610 1464 202 157 168 chrX 134475157 134475283 -32175013 + Lx7 LINE L1 6076 6194 -1502 7 1610 1115 72 0 0 chrX 134475283 134475421 -32174875 + B1_Mus1 SINE Alu 2 139 -9 7 1610 252 0 0 0 chrX 134475421 134475449 -32174847 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 7 1610 180 0 0 0 chrX 134475449 134475469 -32174827 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 7 1610 1464 202 157 168 chrX 134475469 134475646 -32174650 + Lx7 LINE L1 6195 6409 -1287 7 1610 233 296 48 36 chrX 134475646 134475730 -32174566 - LTR41 LTR ERVL -212 556 472 7 1610 1464 202 157 168 chrX 134475730 134475940 -32174356 + Lx7 LINE L1 6410 6666 -1030 7 1610 1062 210 5 169 chrX 134475938 134476311 -32173985 + RMER1B Other Other 378 689 -377 7 1610 1647 212 13 3 chrX 134476320 134476623 -32173673 - RMER1B Other Other -715 351 46 7 1610 1863 182 29 90 chrX 134476652 134476753 -32173543 + Lx7 LINE L1 7249 7347 -349 7 1610 219 114 0 0 chrX 134476753 134476788 -32173508 + (TA)n Simple_repeat Simple_repeat 2 36 0 7 1610 1863 182 29 90 chrX 134476788 134477163 -32173133 + Lx7 LINE L1 7348 7696 0 7 1610 228 246 35 0 chrX 134477211 134477268 -32173028 + Tigger5 DNA MER2_type 2211 2269 -137 7 1610 1182 169 0 49 chrX 134477312 134477555 -32172741 - L1Md_A LINE L1 0 6582 6352 7 1610 297 327 96 0 chrX 134477629 134477733 -32172563 + RSINE1 SINE B4 12 125 -40 7 1610 387 0 0 0 chrX 134477734 134477777 -32172519 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1610 477 0 0 0 chrX 134477777 134477829 -32172467 + (GA)n Simple_repeat Simple_repeat 2 54 0 7 1610 452 290 20 7 chrX 134477946 134478092 -32172204 + RSINE1 SINE B4 1 148 -17 7 1610 1116 62 0 0 chrX 134478112 134478257 -32172039 + (TAGA)n Simple_repeat Simple_repeat 1 145 0 7 1610 391 419 4 22 chrX 134478377 134478604 -32171692 + MER47B DNA MER2_type 24 246 -172 7 1610 221 0 35 0 chrX 134478692 134478721 -32171575 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 7 1610 356 139 14 14 chrX 134479090 134479163 -32171133 + Lx2 LINE L1 6924 6996 -1 7 1610 189 0 0 0 chrX 134479263 134479284 -32171012 + (A)n Simple_repeat Simple_repeat 1 21 0 7 1610 285 203 13 40 chrX 134479653 134479787 -32170509 + T-rich Low_complexity Low_complexity 1 130 0 7 1611 564 235 65 43 chrX 134480120 134480258 -32170038 - B1_Mur2 SINE Alu -8 141 1 7 1611 689 246 8 0 chrX 134480409 134480543 -32169753 - B1F SINE Alu -12 137 3 7 1611 438 310 7 52 chrX 134480543 134480562 -32169734 - ID_B1 SINE B4 -12 212 67 7 1611 610 302 31 11 chrX 134481631 134481822 -32168474 - B3A SINE B2 0 198 4 7 1611 504 0 0 0 chrX 134482110 134482166 -32168130 + (GA)n Simple_repeat Simple_repeat 1 56 0 7 1611 25 75 0 0 chrX 134482229 134482282 -32168014 + AT_rich Low_complexity Low_complexity 1 53 0 7 1611 857 254 117 19 chrX 134482477 134482800 -32167496 - MTEa LTR MaLR 0 379 6 7 1611 201 205 49 37 chrX 134483180 134483261 -32167035 + CT-rich Low_complexity Low_complexity 6 87 0 7 1611 237 65 0 0 chrX 134484307 134484338 -32165958 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 7 1611 8963 124 15 11 chrX 134485740 134487121 -32163175 - Lx2 LINE L1 -1 6996 5610 7 1611 25 0 0 0 chrX 134487180 134487205 -32163091 + AT_rich Low_complexity Low_complexity 1 25 0 7 1611 369 0 0 0 chrX 134487254 134487295 -32163001 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1611 21 36 0 0 chrX 134487791 134487819 -32162477 + AT_rich Low_complexity Low_complexity 1 28 0 7 1611 255 290 141 11 chrX 134487885 134488070 -32162226 + L1MEd LINE L1 1005 1213 -4923 7 1611 222 211 0 0 chrX 134488085 134488123 -32162173 + (CATA)n Simple_repeat Simple_repeat 3 40 0 7 1611 571 252 50 50 chrX 134488364 134488523 -32161773 - ORR1D1 LTR MaLR -193 181 23 7 1611 1461 262 55 20 chrX 134488931 134489278 -32161018 - Lx6 LINE L1 -176 7284 6926 7 1611 508 282 151 11 chrX 134489387 134489499 -32160797 + B3 SINE B2 5 122 -94 7 1611 188 0 74 0 chrX 134489499 134489526 -32160770 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 7 1611 508 282 151 11 chrX 134489526 134489542 -32160754 + B3 SINE B2 123 140 -76 7 1611 186 103 0 0 chrX 134489542 134489571 -32160725 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1611 508 282 151 11 chrX 134489571 134489620 -32160676 + B3 SINE B2 141 207 -9 7 1611 314 319 108 37 chrX 134489685 134489981 -32160315 + L1MEd LINE L1 3106 3422 -2724 7 1611 1575 43 0 0 chrX 134490281 134490469 -32159827 + B2_Mm1t SINE B2 1 188 -5 7 1611 5001 77 45 6 chrX 134490598 134491281 -32159015 + L1Md_F2 LINE L1 5850 6559 -23 7 1611 420 77 0 0 chrX 134491282 134491347 -32158949 + (TAA)n Simple_repeat Simple_repeat 2 66 0 7 1611 30 69 0 0 chrX 134491459 134491517 -32158779 + AT_rich Low_complexity Low_complexity 1 58 0 7 1611 395 279 111 7 chrX 134492304 134492436 -32157860 - PB1D9 SINE Alu -8 141 1 7 1611 237 274 40 14 chrX 134493151 134493225 -32157071 - MER5B DNA MER1_type 0 178 103 7 1611 23 0 0 0 chrX 134493264 134493287 -32157009 + AT_rich Low_complexity Low_complexity 1 23 0 7 1611 621 284 47 5 chrX 134493687 134493878 -32156418 + MER20 DNA MER1_type 1 199 -20 7 1611 216 0 0 0 chrX 134494802 134494826 -32155470 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1611 189 344 0 45 chrX 134496917 134496984 -32153312 + L2c LINE L2 3099 3162 -225 7 1611 991 163 33 0 chrX 134497145 134497329 -32152967 - L1_Mur1 LINE L1 -785 5101 4912 7 1611 3383 102 84 8 chrX 134497329 134497862 -32152434 + Lx2 LINE L1 6423 6996 -1 7 1611 360 0 0 0 chrX 134497989 134498029 -32152267 + (TAA)n Simple_repeat Simple_repeat 3 42 0 7 1611 197 350 25 0 chrX 134498045 134498125 -32152171 + MIR SINE MIR 180 261 -1 7 1611 2974 17 46 0 chrX 134498132 134498483 -32151813 - IAPLTR1_Mm LTR ERVK 0 367 1 7 1611 13161 25 3 4 chrX 134498483 134500000 -32150296 - IAPEz-int LTR ERVK 0 6481 4966 7 1611 1383 19 0 0 chrX 134500000 134500162 -32150134 - IAPEz-int LTR ERVK -1516 4965 4804 1 1611 19057 29 44 0 chrX 134500162 134502539 -32147757 - IAPEz-int LTR ERVK -3993 2488 8 1 1611 3005 17 46 0 chrX 134502539 134502890 -32147406 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1611 242 303 32 53 chrX 134503670 134503764 -32146532 + Tigger11a DNA MER2_type 226 317 -418 2 1611 952 162 0 0 chrX 134504786 134504928 -32145368 - B1_Mur4 SINE Alu -8 142 1 3 1611 502 301 12 49 chrX 134505222 134505386 -32144910 + RSINE1 SINE B4 8 165 0 4 1611 245 326 122 74 chrX 134505386 134505411 -32144885 + B3 SINE B2 3 200 -16 5 1611 441 0 0 0 chrX 134505420 134505469 -32144827 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1611 1645 157 74 17 chrX 134505872 134506093 -32144203 + MTC LTR MaLR 1 240 -181 7 1611 1654 251 126 56 chrX 134506093 134506988 -32143308 - RMER17B LTR ERVK 0 958 1 8 1611 1645 157 74 17 chrX 134506988 134507064 -32143232 + MTC LTR MaLR 241 315 -106 7 1611 7181 8 0 0 chrX 134507162 134508000 -32142296 - L1Md_T LINE L1 0 6582 5745 9 1611 3517 40 2 0 chrX 134508000 134508420 -32141876 - L1Md_F2 LINE L1 -5 6577 6157 1 1611 347 298 0 21 chrX 134508437 134508533 -32141763 + MTC LTR MaLR 320 413 -8 7 1611 855 93 37 0 chrX 134509597 134509759 -32140537 + (GA)n Simple_repeat Simple_repeat 1 168 0 1 1611 378 0 0 0 chrX 134510448 134510490 -32139806 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1611 245 188 35 12 chrX 134510491 134510577 -32139719 + (TA)n Simple_repeat Simple_repeat 2 89 0 1 1611 301 272 0 0 chrX 134510633 134510714 -32139582 - ID4 SINE ID 0 83 3 1 1611 209 310 14 14 chrX 134511079 134511151 -32139145 + CT-rich Low_complexity Low_complexity 2 73 0 1 1611 317 305 20 50 chrX 134511152 134511252 -32139044 - B1F SINE Alu -51 98 2 1 1611 328 315 55 80 chrX 134511918 134512118 -32138178 - L2b LINE L2 -14 3373 3179 1 1611 423 343 71 17 chrX 134513683 134513923 -32136373 - MIR SINE MIR -9 253 1 1 1611 687 280 156 2 chrX 134514035 134514497 -32135799 + L1ME2 LINE L1 5615 6151 -13 1 1611 21 0 0 0 chrX 134514532 134514553 -32135743 + AT_rich Low_complexity Low_complexity 1 21 0 2 1611 463 270 0 26 chrX 134514559 134514673 -32135623 + RSINE1 SINE B4 26 136 -29 2 1611 227 188 41 20 chrX 134515400 134515449 -32134847 - RSINE1 SINE B4 -3 162 113 2 1611 628 156 0 32 chrX 134515546 134515672 -32134624 - L1Md_F2 LINE L1 0 6582 6461 2 1611 227 93 0 23 chrX 134515749 134515793 -32134503 + (CAAAAA)n Simple_repeat Simple_repeat 2 44 0 2 1611 280 268 0 14 chrX 134515793 134515865 -32134431 - B4 SINE B4 -216 76 6 2 1611 1959 126 19 3 chrX 134516164 134516474 -32133822 - ORR1A4 LTR MaLR -14 315 1 2 1611 265 325 122 5 chrX 134516519 134516708 -32133588 + L2a LINE L2 3207 3417 -9 2 1611 782 300 65 18 chrX 134516775 134517050 -32133246 + B4 SINE B4 5 292 0 2 1611 549 0 0 0 chrX 134517135 134517196 -32133100 + (GA)n Simple_repeat Simple_repeat 1 61 0 2 1611 1464 245 24 35 chrX 134517201 134517573 -32132723 - ORR1D2 LTR MaLR -2 368 1 3 1611 522 31 0 0 chrX 134517577 134517641 -32132655 + (CA)n Simple_repeat Simple_repeat 1 64 0 3 1611 435 19 0 0 chrX 134518398 134518450 -32131846 + (TTTA)n Simple_repeat Simple_repeat 4 55 0 3 1611 634 280 21 42 chrX 134518610 134518800 -32131496 + B3A SINE B2 1 186 -12 3 1611 528 322 56 22 chrX 134519829 134520061 -32130235 + RMER15 LTR ERVL 336 575 0 3 1611 189 227 23 0 chrX 134520061 134520105 -32130191 - L2 LINE L2 -1055 2364 2320 3 1611 882 296 29 55 chrX 134520195 134520470 -32129826 + B4A SINE B4 2 269 -23 3 1611 458 321 96 56 chrX 134520709 134520988 -32129308 + ORR1E LTR MaLR 1 281 -86 3 1611 191 363 102 28 chrX 134521065 134521194 -32129102 - L2 LINE L2 -1415 2004 1863 3 1611 1370 186 86 145 chrX 134521194 134521374 -32128922 - ORR1C2 LTR MaLR 0 384 196 3 1611 405 0 0 0 chrX 134521374 134521419 -32128877 + (GA)n Simple_repeat Simple_repeat 2 46 0 3 1611 1370 186 86 145 chrX 134521419 134521646 -32128650 - ORR1C2 LTR MaLR -189 195 1 3 1611 191 363 102 28 chrX 134521646 134521692 -32128604 - L2 LINE L2 -1557 1862 1816 3 1611 647 280 11 74 chrX 134521740 134521929 -32128367 + B3 SINE B2 40 216 0 4 1611 1348 112 0 27 chrX 134521953 134522173 -32128123 - Lx3A LINE L1 -4 6977 6764 4 1611 296 328 119 17 chrX 134522416 134522593 -32127703 - L2 LINE L2 -1947 1472 1278 3 1611 1472 68 0 0 chrX 134522651 134522842 -32127454 - L1Md_T LINE L1 0 6582 6392 4 1611 374 94 0 15 chrX 134523273 134523338 -32126958 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 4 1611 438 133 24 12 chrX 134523515 134523599 -32126697 - RMER15 LTR ERVL -453 122 38 4 1611 478 40 0 3 chrX 134523644 134523712 -32126584 + L1Md_T LINE L1 5243 5311 -575 4 1611 7924 31 44 0 chrX 134523714 134524667 -32125629 + L1Md_T LINE L1 5587 6581 -1 4 1611 233 299 13 0 chrX 134524788 134524865 -32125431 + Lx8 LINE L1 6695 6772 -701 4 1611 1502 175 55 120 chrX 134524893 134525078 -32125218 - RMER10B LTR ERVL -8 390 221 4 1611 1649 164 45 65 chrX 134525078 134525496 -32124800 - RMER17C LTR ERVK 0 410 1 4 1611 732 67 25 0 chrX 134525497 134525617 -32124679 + (GA)n Simple_repeat Simple_repeat 2 124 0 4 1611 1502 175 55 120 chrX 134525617 134525845 -32124451 - RMER10B LTR ERVL -178 220 2 4 1611 917 297 82 23 chrX 134525848 134526237 -32124059 + Lx8 LINE L1 6825 7236 -237 4 1611 831 87 158 0 chrX 134526316 134526443 -32123853 + B1_Mus1 SINE Alu 2 148 0 5 1611 563 302 63 29 chrX 134526612 134526786 -32123510 + B3A SINE B2 1 180 -36 5 1611 24 32 0 0 chrX 134526827 134526858 -32123438 + AT_rich Low_complexity Low_complexity 1 31 0 5 1611 1075 57 0 28 chrX 134529099 134529243 -32121053 - B1_Mus2 SINE Alu -5 142 3 5 1611 202 264 135 22 chrX 134529867 134529956 -32120340 - L4 LINE RTE -1534 495 397 5 1611 383 246 9 43 chrX 134530078 134530193 -32120103 + MLT1A1 LTR MaLR 298 408 0 5 1611 416 35 17 0 chrX 134530248 134530306 -32119990 + (TC)n Simple_repeat Simple_repeat 2 60 0 5 1611 306 0 0 0 chrX 134530306 134530340 -32119956 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1611 599 103 0 10 chrX 134530557 134530655 -32119641 + (TCCC)n Simple_repeat Simple_repeat 1 97 0 5 1611 952 107 56 14 chrX 134530902 134531044 -32119252 - B1_Mus1 SINE Alu 0 148 1 5 1611 406 298 29 9 chrX 134531275 134531380 -32118916 + B4A SINE B4 10 116 -176 6 1611 9889 159 36 2 chrX 134531393 134532712 -32117584 - Lx3C LINE L1 -7 6969 5614 6 1611 2618 52 43 0 chrX 134532712 134533040 -32117256 - ORR1A1 LTR MaLR -4 342 1 6 1611 9889 181 326 25 chrX 134533040 134533343 -32116953 - Lx3C LINE L1 -267 5616 5311 6 1611 4925 38 0 0 chrX 134533343 134533923 -32116373 - L1Md_T LINE L1 0 6582 6003 6 1611 9889 181 326 25 chrX 134533923 134534491 -32115805 - Lx3C LINE L1 -573 5310 4738 6 1611 247 25 0 48 chrX 134534491 134534533 -32115763 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 6 1611 12049 149 204 29 chrX 134534533 134535111 -32115185 - Lx3C LINE L1 -628 3286 3053 6 1611 319 83 33 0 chrX 134535111 134535171 -32115125 + (TTG)n Simple_repeat Simple_repeat 2 63 0 6 1611 12049 100 20 33 chrX 134535171 134536111 -32114185 - Lx3C LINE L1 -862 3052 2114 6 1611 1071 102 0 7 chrX 134536111 134536259 -32114037 + B1_Mm SINE Alu 1 147 0 6 1611 12049 103 17 20 chrX 134536259 134538026 -32112270 - Lx3C LINE L1 -1801 2113 364 6 1611 297 283 0 0 chrX 134538162 134538222 -32112074 + PB1D10 SINE Alu 17 76 -41 6 1611 845 118 0 0 chrX 134538226 134538345 -32111951 - ORR1A2 LTR MaLR -87 240 122 6 1611 2620 161 6 2 chrX 134538367 134538883 -32111413 - L1_Mur1 LINE L1 -4165 1721 1204 6 1611 3277 80 29 119 chrX 134538895 134539141 -32111155 + Lx3_Mus LINE L1 5552 5797 -89 7 1611 1079 109 0 0 chrX 134539141 134539288 -32111008 + B1_Mm SINE Alu 1 147 0 7 1611 3277 79 35 129 chrX 134539288 134539715 -32110581 + Lx3_Mus LINE L1 5795 6162 -847 7 1611 1500 163 33 3 chrX 134539713 134540020 -32110276 - L1_Mur1 LINE L1 -5800 1184 869 6 1611 21 36 0 0 chrX 134541260 134541288 -32109008 + AT_rich Low_complexity Low_complexity 1 28 0 7 1611 180 231 0 0 chrX 134542533 134542585 -32107711 + (TA)n Simple_repeat Simple_repeat 2 53 0 7 1611 372 43 0 0 chrX 134542897 134542943 -32107353 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1611 256 122 40 30 chrX 134543944 134544045 -32106251 + T-rich Low_complexity Low_complexity 1 102 0 7 1611 683 62 18 9 chrX 134544969 134545083 -32105213 + L1_Mus3 LINE L1 6524 6638 0 7 1611 450 36 0 0 chrX 134545484 134545540 -32104756 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1611 2275 115 33 38 chrX 134545671 134546068 -32104228 - Lx LINE L1 0 6654 6260 7 1611 180 399 52 48 chrX 134546732 134546982 -32103314 + L2c LINE L2 3107 3357 -30 7 1611 387 0 0 0 chrX 134548265 134548308 -32101988 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 1611 255 327 54 6 chrX 134548387 134548504 -32101792 + MIR SINE MIR 108 235 -33 8 1611 1401 277 55 2 chrX 134550402 134550800 -32099496 + MTD LTR MaLR 1 419 0 8 1611 681 191 111 0 chrX 134551254 134551380 -32098916 + B1_Mur4 SINE Alu 10 149 -1 8 1611 300 53 0 0 chrX 134552175 134552213 -32098083 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 1611 1000 196 62 5 chrX 134552278 134552488 -32097808 - URR1A DNA MER1_type 0 226 5 8 1611 611 26 13 0 chrX 134552564 134552641 -32097655 + (TG)n Simple_repeat Simple_repeat 1 78 0 8 1611 411 304 31 23 chrX 134553184 134553312 -32096984 - B4A SINE B4 -163 129 1 8 1611 256 319 29 0 chrX 134553505 134553574 -32096722 - B1_Mus2 SINE Alu -74 73 3 8 1611 543 295 0 24 chrX 134553574 134553652 -32096644 - ID SINE ID -141 83 9 8 1611 347 337 108 31 chrX 134553659 134553947 -32096349 + L2a LINE L2 3108 3417 -9 9 1611 682 304 0 24 chrX 134554831 134554996 -32095300 + RSINE1 SINE B4 3 163 -2 9 1611 2263 91 3 59 chrX 134555360 134555698 -32094598 - ORR1A2 LTR MaLR -8 319 1 9 1611 836 243 97 5 chrX 134556485 134556671 -32093625 - B3 SINE B2 -10 206 4 9 1611 348 161 0 0 chrX 134556771 134556833 -32093463 + (TATG)n Simple_repeat Simple_repeat 2 63 0 9 1611 397 281 81 20 chrX 134557021 134557170 -32093126 + LTR85c LTR Gypsy? 84 241 -582 9 1611 282 338 53 110 chrX 134557267 134557530 -32092766 + LTR85c LTR Gypsy? 402 649 -174 9 1611 3335 171 26 9 chrX 134557634 134558675 -32091621 + L1VL4 LINE L1 206 1266 -2293 9 1611 250 170 0 0 chrX 134558675 134558722 -32091574 + L1_Mm LINE L1 2090 2136 -3747 9 1611 3975 114 11 2 chrX 134558717 134559342 -32090954 + L1VL4 LINE L1 2117 2747 -812 9 1611 9256 138 21 1 chrX 134559334 134559703 -32090593 + L1_Mus3 LINE L1 4360 4731 -1152 9 1611 216 0 0 0 chrX 134559703 134559727 -32090569 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 9 1611 9256 127 14 1 chrX 134559727 134561595 -32088701 + L1_Mus3 LINE L1 4732 6631 -7 9 1611 185 154 0 37 chrX 134561600 134561654 -32088642 + A-rich Low_complexity Low_complexity 2 53 0 1 1611 213 406 15 22 chrX 134563799 134563935 -32086361 + L2 LINE L2 1573 1707 -1712 1 1611 535 174 45 15 chrX 134564228 134564362 -32085934 + Lx7 LINE L1 7559 7696 0 1 1611 377 296 19 0 chrX 134564472 134564580 -32085716 + PB1D10 SINE Alu 2 111 -6 1 1611 839 316 30 77 chrX 134564653 134565019 -32085277 - MT2A LTR ERVL -71 462 114 1 1611 396 243 14 48 chrX 134565075 134565222 -32085074 + HAL1 LINE L1 1982 2123 -384 1 1611 259 248 119 44 chrX 134565279 134565439 -32084857 + HAL1 LINE L1 2227 2398 -109 1 1611 22 0 0 0 chrX 134565694 134565716 -32084580 + AT_rich Low_complexity Low_complexity 1 22 0 1 1611 803 169 241 11 chrX 134566187 134566361 -32083935 - B3 SINE B2 -1 215 2 1 1611 463 320 93 25 chrX 134567296 134567617 -32082679 + RLTR6-int LTR ERV1 7175 7519 -259 1 1611 185 59 59 0 chrX 134567617 134567651 -32082645 + (CAGAGA)n Simple_repeat Simple_repeat 2 37 0 1 1611 463 320 93 25 chrX 134567651 134567694 -32082602 + RLTR6-int LTR ERV1 7520 7563 -215 1 1611 3103 166 5 70 chrX 134567891 134568495 -32081801 + RMER2 LTR ERV1 1 565 -2 1 1611 1011 282 26 9 chrX 134568511 134568832 -32081464 - L1_Mur3 LINE L1 -268 5612 5312 1 1611 708 309 110 12 chrX 134568848 134569094 -32081202 - RCHARR1 DNA MER1_type -656 318 49 1 1611 585 252 19 44 chrX 134569860 134570018 -32080278 - ID_B1 SINE B4 0 224 71 1 1611 249 196 0 0 chrX 134570358 134570414 -32079882 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1611 899 9 27 0 chrX 134571209 134571319 -32078977 + (TATATG)n Simple_repeat Simple_repeat 2 114 0 1 1611 236 312 37 12 chrX 134571444 134571458 -32078838 - ID4_ SINE ID 0 83 32 1 1611 256 328 0 0 chrX 134571458 134571519 -32078777 - tRNA-Ala-GCY_ tRNA tRNA -13 62 2 1 1611 586 302 83 11 chrX 134571960 134572238 -32078058 - MER33 DNA MER1_type -15 309 12 1 1611 309 252 49 29 chrX 134572827 134572929 -32077367 - MER3 DNA MER1_type -23 186 83 1 1611 298 186 34 0 chrX 134573549 134573608 -32076688 - RMER5 LTR ERV1 0 534 474 1 1611 330 183 0 0 chrX 134573627 134573687 -32076609 - RMER5 LTR ERV1 -444 90 31 1 1611 2800 160 21 35 chrX 134573700 134574211 -32076085 + RLTR24 LTR ERV1 19 522 -7 1 1611 906 191 131 0 chrX 134575311 134575510 -32074786 - URR1B DNA MER1_type 0 225 1 1 1611 1036 136 6 6 chrX 134575614 134575777 -32074519 - RMER5 LTR ERV1 -7 527 365 1 1611 848 247 11 133 chrX 134575778 134576063 -32074233 - RMER5 LTR ERV1 -284 250 1 1 1611 6857 83 73 3 chrX 134576246 134577297 -32072999 + L1_Mus3 LINE L1 5517 6638 0 1 1611 559 283 48 48 chrX 134577809 134577976 -32072320 + B3 SINE B2 2 168 -48 1 1611 282 29 0 0 chrX 134577990 134578025 -32072271 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1611 400 355 67 62 chrX 134578430 134578670 -32071626 - MIRb SINE MIR -1 267 27 1 1611 417 243 154 28 chrX 134578723 134578905 -32071391 - MER3 DNA MER1_type -4 205 1 1 1611 267 103 0 0 chrX 134579944 134579983 -32070313 + (GGA)n Simple_repeat Simple_repeat 2 40 0 1 1611 246 32 0 0 chrX 134580177 134580208 -32070088 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1611 874 162 463 0 chrX 134580355 134580560 -32069736 - RMER19B LTR ERVK -7 895 596 1 1611 813 136 17 114 chrX 134580823 134580998 -32069298 - B2_Mm2 SINE B2 -2 193 36 1 1611 1096 209 59 17 chrX 134581210 134581449 -32068847 - RMER19B LTR ERVK -301 601 353 1 1611 919 182 19 0 chrX 134581477 134581636 -32068660 - RMER19B LTR ERVK -681 221 60 1 1611 630 180 70 8 chrX 134581618 134581747 -32068549 - RMER19B LTR ERVK -765 137 1 1 1611 839 161 25 13 chrX 134582644 134582819 -32067477 - B3 SINE B2 -5 188 2 1 1611 207 0 0 0 chrX 134583040 134583063 -32067233 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1 1611 418 248 178 62 chrX 134583731 134583860 -32066436 + B1_Mur1 SINE Alu 1 144 -5 1 1611 23 33 0 0 chrX 134584092 134584122 -32066174 + AT_rich Low_complexity Low_complexity 1 30 0 1 1611 1680 225 97 26 chrX 134584438 134584903 -32065393 + RMER5 LTR ERV1 28 525 -9 1 1611 225 0 0 0 chrX 134584924 134584949 -32065347 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1 1611 1501 186 96 11 chrX 134585003 134585357 -32064939 + ORR1C2 LTR MaLR 1 384 0 1 1611 1332 19 0 0 chrX 134585386 134585545 -32064751 - L1Md_A LINE L1 0 6582 6424 1 1611 454 267 34 157 chrX 134586692 134586877 -32063419 + RMER10A LTR ERVL 105 256 -186 1 1611 1299 101 0 16 chrX 134586877 134587068 -32063228 - B2_Mm2 SINE B2 -6 189 2 1 1611 454 267 34 157 chrX 134587068 134587238 -32063058 + RMER10A LTR ERVL 257 416 -26 1 1611 567 96 0 0 chrX 134587669 134587752 -32062544 + (TTCTC)n Simple_repeat Simple_repeat 5 87 0 1 1611 5689 206 103 64 chrX 134587816 134589394 -32060902 + Lx7 LINE L1 5951 7606 -90 1 1611 360 0 0 0 chrX 134589394 134589434 -32060862 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1611 471 35 0 0 chrX 134589434 134589490 -32060806 + (GA)n Simple_repeat Simple_repeat 2 58 0 1 1611 5689 206 103 64 chrX 134589490 134589587 -32060709 + Lx7 LINE L1 7607 7691 -5 1 1611 3550 158 96 54 chrX 134589621 134590328 -32059968 - RMER19A LTR ERVK 0 737 1 1 1611 1475 83 41 0 chrX 134591275 134591493 -32058803 - L1_Mus3 LINE L1 -3 6635 6409 1 1611 615 152 29 7 chrX 134591626 134591765 -32058531 + CT-rich Low_complexity Low_complexity 2 143 0 1 1611 659 171 92 8 chrX 134591779 134591909 -32058387 - B1_Mus1 SINE Alu -7 141 1 1 1611 373 179 64 0 chrX 134593587 134593665 -32056631 - MIR SINE MIR -28 234 152 1 1611 629 273 73 28 chrX 134593806 134593983 -32056313 + B3 SINE B2 25 209 -7 1 1611 555 16 0 0 chrX 134594390 134594454 -32055842 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 1611 7350 111 14 3 chrX 134594628 134595752 -32054544 - Lx LINE L1 -2 6652 5517 1 1611 244 305 0 50 chrX 134595970 134596070 -32054226 + MIR3 SINE MIR 109 203 -5 1 1611 387 273 72 62 chrX 134597840 134598035 -32052261 + B3A SINE B2 2 198 0 1 1611 383 290 50 22 chrX 134598069 134598291 -32052005 + L1_Mur3 LINE L1 3509 3736 -2144 1 1611 485 68 132 0 chrX 134598292 134598368 -32051928 + B1_Mm SINE Alu 52 136 -13 1 1611 396 0 0 0 chrX 134598368 134598412 -32051884 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 1 1611 1527 282 60 30 chrX 134598412 134598607 -32051689 + L1_Mur3 LINE L1 3747 3933 -1947 1 1611 2267 164 20 13 chrX 134598607 134598997 -32051299 + ORR1B1 LTR MaLR 2 394 0 1 1611 1527 282 60 30 chrX 134598997 134599440 -32050856 + L1_Mur3 LINE L1 3934 4404 -1476 1 1611 284 263 70 133 chrX 134599634 134599792 -32050504 + MIR SINE MIR 51 205 -63 1 1611 180 0 0 0 chrX 134599819 134599839 -32050457 + (CTG)n Simple_repeat Simple_repeat 2 21 0 1 1611 1840 114 12 10 chrX 134600632 134600910 -32049386 - Lx2 LINE L1 -84 6913 6667 1 1611 843 255 61 15 chrX 134600980 134601243 -32049053 - MamRep434 DNA TcMar -139 287 13 1 1611 468 273 271 6 chrX 134602433 134602610 -32047686 - MIRb SINE MIR -28 240 17 1 1611 467 258 22 52 chrX 134602887 134603022 -32047274 + B1F2 SINE Alu 13 143 -6 1 1611 489 147 12 12 chrX 134603193 134603351 -32046945 + (TCTA)n Simple_repeat Simple_repeat 1 158 0 1 1611 1253 277 47 50 chrX 134603416 134603989 -32046307 + L1MA4 LINE L1 5344 5880 -1816 1 1611 1506 237 26 87 chrX 134604239 134604665 -32045631 - RMER19C LTR ERVK 0 611 212 1 1611 1121 226 14 58 chrX 134604796 134605087 -32045209 - RMER19C LTR ERVK -332 279 2 1 1611 570 271 69 8 chrX 134605103 134605233 -32045063 - RSINE1 SINE B4 -22 143 6 1 1611 237 261 0 55 chrX 134605405 134605478 -32044818 - MamRep137 DNA TcMar? -280 164 96 1 1611 1517 261 74 9 chrX 134606350 134606810 -32043486 - Lx8 LINE L1 -2 7471 6982 1 1611 195 354 161 34 chrX 134608982 134609187 -32041109 + MIR SINE MIR 20 250 -12 1 1611 306 0 0 0 chrX 134609262 134609296 -32041000 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 1611 234 415 26 13 chrX 134609441 134609595 -32040701 + MIRb SINE MIR 17 172 -96 1 1611 231 197 27 80 chrX 134609678 134609866 -32040430 + (TATAA)n Simple_repeat Simple_repeat 3 180 0 1 1611 299 223 46 8 chrX 134609697 134609828 -32040468 + (TA)n Simple_repeat Simple_repeat 1 136 0 1 1611 517 311 10 44 chrX 134609923 134610216 -32040080 - L1M4 LINE L1 -1233 4913 4631 1 1611 204 245 0 0 chrX 134610256 134610309 -32039987 + (TATG)n Simple_repeat Simple_repeat 4 56 0 1 1611 402 273 100 0 chrX 134610320 134610430 -32039866 - ID_B1 SINE B4 -11 213 93 1 201 2431 322 89 29 chrX 134610565 134611840 -32038456 - Lx8 LINE L1 -9 7464 6114 1 1612 2623 25 71 0 chrX 134612039 134612362 -32037934 + ORR1A0 LTR MaLR 1 346 0 1 1612 22 0 0 0 chrX 134612897 134612919 -32037377 + AT_rich Low_complexity Low_complexity 1 22 0 1 1612 561 263 131 5 chrX 134612933 134613124 -32037172 - B3 SINE B2 0 216 2 1 1612 21 57 0 0 chrX 134614352 134614387 -32035909 + AT_rich Low_complexity Low_complexity 1 35 0 1 1612 1016 97 127 0 chrX 134614456 134614621 -32035675 - B2_Mm2 SINE B2 -9 186 1 1 1612 496 281 62 8 chrX 134614670 134614799 -32035497 + B1_Mur1 SINE Alu 2 137 -12 1 1612 32 57 0 0 chrX 134614801 134614854 -32035442 + AT_rich Low_complexity Low_complexity 1 53 0 1 1612 6070 197 37 12 chrX 134614854 134616125 -32034171 - Lx9 LINE L1 -19 7625 6323 1 1612 1072 20 33 0 chrX 134617559 134617710 -32032586 + (GA)n Simple_repeat Simple_repeat 1 156 0 1 1612 1880 249 163 33 chrX 134617970 134618760 -32031536 - Lx9 LINE L1 -26 7618 6726 1 1612 1873 252 27 115 chrX 134619212 134619804 -32030492 + RMER15 LTR ERVL 27 566 -9 1 1612 283 33 82 0 chrX 134620017 134620078 -32030218 + (TTTG)n Simple_repeat Simple_repeat 2 67 0 1 1612 2638 61 6 6 chrX 134620396 134620741 -32029555 + L1Md_F2 LINE L1 5242 5586 -297 1 1612 7252 86 0 16 chrX 134620741 134621743 -32028553 + L1Md_F2 LINE L1 5587 6572 -10 1 1612 534 145 5 0 chrX 134621764 134621859 -32028437 - L1_Mus2 LINE L1 -1769 5927 5831 1 1612 534 332 70 19 chrX 134621892 134622150 -32028146 - L2 LINE L2 -576 2843 2573 1 1612 247 244 0 0 chrX 134622281 134622326 -32027970 + B3A SINE B2 4 48 -150 1 1612 368 240 35 6 chrX 134622507 134622679 -32027617 + (TA)n Simple_repeat Simple_repeat 2 178 0 1 1612 879 206 29 0 chrX 134623048 134623218 -32027078 - B3 SINE B2 0 216 42 2 1612 402 21 0 0 chrX 134623226 134623273 -32027023 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 1612 2056 93 7 26 chrX 134623283 134623593 -32026703 - L1_Mus2 LINE L1 0 6566 6263 2 1612 2070 100 3 0 chrX 134623593 134623894 -32026402 + L1_Mm LINE L1 4626 4927 -956 2 1612 246 95 0 0 chrX 134624680 134624722 -32025574 + (T)n Simple_repeat Simple_repeat 1 42 0 2 1612 810 0 0 0 chrX 134625005 134625095 -32025201 + (GAAA)n Simple_repeat Simple_repeat 3 92 0 2 1612 324 351 52 15 chrX 134625489 134625508 -32024788 + B4 SINE B4 64 87 -205 2 1612 554 279 7 45 chrX 134625508 134625662 -32024634 + B1F2 SINE Alu 1 148 -1 2 1612 253 295 0 37 chrX 134625874 134625955 -32024341 - MIR3 SINE MIR -44 164 87 2 1612 206 333 64 18 chrX 134626128 134626238 -32024058 - MIR SINE MIR -78 130 16 2 1612 198 0 0 0 chrX 134626648 134626670 -32023626 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 1612 274 346 19 0 chrX 134627071 134627175 -32023121 + MIRc SINE MIR 7 112 -156 2 1612 234 125 0 0 chrX 134627512 134627552 -32022744 - Lx8 LINE L1 -21 7452 7413 2 1612 416 296 136 42 chrX 134627573 134627765 -32022531 - L1MA4A LINE L1 -310 5993 5798 2 1612 441 0 0 0 chrX 134627765 134627814 -32022482 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 1612 222 37 0 0 chrX 134627814 134627840 -32022456 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 1612 416 296 136 42 chrX 134627840 134627932 -32022364 - L1MA4A LINE L1 -506 5797 5682 2 1612 323 196 7 176 chrX 134627942 134628078 -32022218 - RLTR9B LTR ERVK 0 437 325 2 1612 420 264 90 45 chrX 134628131 134628411 -32021885 - L1MA4A LINE L1 -643 5657 5351 2 1612 243 277 65 14 chrX 134628466 134628605 -32021691 + L1_Mur3 LINE L1 5171 5316 -564 2 1612 32 26 0 0 chrX 134628905 134628944 -32021352 + AT_rich Low_complexity Low_complexity 1 39 0 2 1612 719 297 29 18 chrX 134628988 134629269 -32021027 + L1MB7 LINE L1 5756 6039 -145 2 1612 2073 171 46 3 chrX 134629326 134629695 -32020601 + ORR1B1 LTR MaLR 1 385 -9 2 1612 22 0 0 0 chrX 134631066 134631088 -32019208 + AT_rich Low_complexity Low_complexity 1 22 0 2 1612 25 0 0 0 chrX 134632429 134632454 -32017842 + AT_rich Low_complexity Low_complexity 1 25 0 2 1612 414 0 0 0 chrX 134632558 134632604 -32017692 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 1612 6965 56 37 3 chrX 134633371 134634270 -32016026 - RLTR13B3 LTR ERVK 0 929 1 2 1612 884 230 34 192 chrX 134634884 134635147 -32015149 - ORR1D1 LTR MaLR 0 374 161 2 1612 234 0 0 0 chrX 134635147 134635173 -32015123 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 1612 1138 76 7 0 chrX 134635175 134635320 -32014976 - B1_Mus2 SINE Alu -1 146 1 2 1612 884 230 34 192 chrX 134635320 134635495 -32014801 - ORR1D1 LTR MaLR -214 160 3 2 1612 410 334 22 154 chrX 134635611 134635968 -32014328 + MLT-int LTR MaLR 251 560 -1175 2 1612 270 0 0 0 chrX 134636019 134636049 -32014247 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 1612 293 303 96 26 chrX 134636825 134636981 -32013315 - Lx8 LINE L1 0 7473 7307 2 1612 343 349 99 11 chrX 134637996 134638187 -32012109 - MIR SINE MIR -39 223 16 2 1612 285 346 53 30 chrX 134640763 134640894 -32009402 - L2a LINE L2 -15 3411 3278 2 1612 822 73 0 0 chrX 134641898 134642008 -32008288 + (TTTTG)n Simple_repeat Simple_repeat 2 111 0 2 1612 381 250 124 41 chrX 134642008 134642129 -32008167 - B1_Mus2 SINE Alu -9 138 8 2 1612 300 253 152 33 chrX 134642055 134642206 -32008090 - MT2B LTR ERVL -351 250 82 2 1612 871 53 119 8 chrX 134643155 134643289 -32007007 - L1Md_F2 LINE L1 -1 6581 6433 2 1612 21 36 0 0 chrX 134643650 134643678 -32006618 + AT_rich Low_complexity Low_complexity 1 28 0 2 1612 254 254 42 14 chrX 134644326 134644398 -32005898 + MLT1A1 LTR MaLR 1 74 -334 2 1612 263 215 85 37 chrX 134644627 134644709 -32005587 - MER5A1 DNA MER1_type -67 99 14 2 1612 1899 217 25 2 chrX 134644761 134645167 -32005129 - MTD LTR MaLR 0 419 5 2 1612 405 102 0 0 chrX 134645229 134645288 -32005008 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 1612 393 22 0 0 chrX 134645698 134645744 -32004552 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1612 303 93 0 0 chrX 134645982 134646025 -32004271 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 1612 1659 254 10 19 chrX 134646061 134646479 -32003817 - Lx7 LINE L1 -319 7377 6964 2 1612 267 31 0 0 chrX 134646485 134646517 -32003779 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 2 1612 7379 193 15 11 chrX 134646517 134647878 -32002418 - Lx5 LINE L1 -16 7034 5668 2 1612 1375 183 12 4 chrX 134647878 134648119 -32002177 - RLTR17 LTR ERVK 0 692 450 2 1612 387 0 0 0 chrX 134648141 134648184 -32002112 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1612 230 330 32 32 chrX 134648219 134648313 -32001983 - Lx8 LINE L1 -236 7237 7144 2 1612 189 0 0 0 chrX 134648793 134648814 -32001482 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1612 2545 304 70 37 chrX 134648836 134650071 -32000225 - Lx9 LINE L1 -213 7431 6157 2 1612 263 279 87 41 chrX 134650155 134650268 -32000028 - Lx9 LINE L1 -1682 5962 5843 2 1612 893 168 0 39 chrX 134650268 134650423 -31999873 - B1_Mur4 SINE Alu 0 150 2 2 1612 308 155 0 0 chrX 134650423 134650481 -31999815 - Lx9 LINE L1 -42 5805 5748 2 1612 1845 308 19 54 chrX 134650546 134651304 -31998992 - Lx9 LINE L1 -594 7050 6320 2 1612 249 250 0 0 chrX 134651484 134651540 -31998756 + Lx9 LINE L1 7069 7124 -520 2 1612 477 0 0 0 chrX 134651764 134651817 -31998479 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 1612 522 0 0 0 chrX 134652785 134652843 -31997453 + (TA)n Simple_repeat Simple_repeat 2 59 0 2 1612 439 319 9 0 chrX 134653632 134653745 -31996551 + RSINE1 SINE B4 11 124 -41 2 1612 431 48 16 0 chrX 134653746 134653808 -31996488 + (CA)n Simple_repeat Simple_repeat 1 63 0 2 1612 1055 296 56 16 chrX 134653864 134654207 -31996089 - MLT1A0 LTR MaLR -11 354 1 2 1612 239 382 45 18 chrX 134654648 134654760 -31995536 - L2b LINE L2 -2 3373 3259 2 1612 1062 263 18 37 chrX 134655495 134655767 -31994529 - MTEb LTR MaLR -112 267 1 2 1612 347 279 45 23 chrX 134655833 134655965 -31994331 - RLTR23 LTR ERV1 -31 399 265 2 1612 586 57 11 0 chrX 134656294 134656382 -31993914 + L1Md_F2 LINE L1 6491 6579 -3 2 1612 318 167 0 0 chrX 134656592 134656652 -31993644 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 1612 279 0 0 0 chrX 134656710 134656741 -31993555 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1612 1853 171 80 52 chrX 134656912 134657389 -31992907 - BGLII_B LTR ERVK -5 436 4 2 1612 1035 75 0 0 chrX 134657389 134657548 -31992748 + (CATATA)n Simple_repeat Simple_repeat 6 164 0 2 1612 438 20 0 0 chrX 134657555 134657606 -31992690 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 1612 1261 344 66 13 chrX 134657606 134658301 -31991995 + Lx8 LINE L1 6709 7440 -33 2 1612 279 0 0 0 chrX 134659565 134659596 -31990700 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1612 343 306 130 0 chrX 134660096 134660204 -31990092 - MER3 DNA MER1_type -87 122 1 2 1612 2149 124 12 3 chrX 134660613 134660937 -31989359 + Lx3C LINE L1 5518 5844 -42 2 1612 37034 25 1 8 chrX 134660936 134666141 -31984155 + L1Md_A LINE L1 421 5586 -297 2 1612 8309 36 1 0 chrX 134666142 134667136 -31983160 + L1Md_A LINE L1 5588 6582 0 2 1612 2029 95 44 3 chrX 134667136 134667453 -31982843 + Lx3C LINE L1 5828 6157 -819 2 1612 5785 111 4 5 chrX 134667447 134668287 -31982009 + L1_Mm LINE L1 5030 5868 -15 2 1612 818 251 51 0 chrX 134668288 134668483 -31981813 + ORR1D1 LTR MaLR 170 374 0 2 1612 185 154 0 25 chrX 134669147 134669187 -31981109 + GA-rich Low_complexity Low_complexity 2 40 0 2 1612 340 297 0 0 chrX 134669249 134669323 -31980973 - ID4_ SINE ID -7 76 3 2 1612 510 333 38 6 chrX 134671283 134671440 -31978856 - RSINE1 SINE B4 -2 163 2 2 1612 549 0 0 0 chrX 134671882 134671943 -31978353 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 1612 210 71 0 0 chrX 134671943 134671970 -31978326 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1612 561 141 0 0 chrX 134672221 134672320 -31977976 + (TA)n Simple_repeat Simple_repeat 1 99 0 2 1612 510 329 425 12 chrX 134672795 134673035 -31977261 + MLT1A0 LTR MaLR 11 349 -59 2 1612 252 0 0 0 chrX 134673035 134673063 -31977233 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 1612 631 235 0 39 chrX 134673412 134673567 -31976729 + B1F2 SINE Alu 1 149 0 2 1612 341 311 157 43 chrX 134673653 134674144 -31976152 - L1MB8 LINE L1 -14 6164 5618 2 1612 707 353 42 28 chrX 134674945 134675298 -31974998 + MLT1A0 LTR MaLR 1 358 -7 2 1612 227 267 0 0 chrX 134675298 134675343 -31974953 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1612 318 224 26 13 chrX 134675861 134675938 -31974358 + B4 SINE B4 1 78 -214 2 1612 9547 60 11 4 chrX 134676123 134678068 -31972228 - L1Md_F2 LINE L1 0 6582 4623 2 1612 3144 104 11 2 chrX 134678301 134678761 -31971535 - L1_Mus3 LINE L1 -6 6632 6169 2 1612 645 210 32 0 chrX 134678835 134678959 -31971337 + B1_Mur3 SINE Alu 4 131 -18 2 1612 990 97 0 0 chrX 134678966 134679110 -31971186 + (GAA)n Simple_repeat Simple_repeat 3 146 0 2 1612 782 238 105 38 chrX 134679969 134680179 -31970117 - 7SK RNA RNA -107 224 1 2 1612 344 225 0 0 chrX 134680351 134680418 -31969878 - ID4 SINE ID -13 70 4 2 1612 352 323 39 31 chrX 134680436 134680564 -31969732 - ID_B1 SINE B4 -9 215 87 2 1612 212 364 75 48 chrX 134680699 134680993 -31969303 + L2 LINE L2 2480 2781 -638 2 1612 241 378 7 0 chrX 134681381 134681532 -31968764 - L2 LINE L2 -584 2835 2684 2 1612 189 269 58 0 chrX 134681904 134681956 -31968340 - MIRc SINE MIR -136 132 78 2 1612 400 322 128 55 chrX 134683284 134683557 -31966739 - L1MC1 LINE L1 -2 6331 6039 2 1612 1208 321 44 38 chrX 134683729 134684314 -31965982 - Lx9 LINE L1 -150 7494 6906 3 1612 594 0 0 0 chrX 134684501 134684567 -31965729 + (TC)n Simple_repeat Simple_repeat 1 66 0 3 1612 236 304 12 48 chrX 134684633 134684716 -31965580 - MLT1M LTR MaLR -461 211 132 3 1612 8480 31 1 0 chrX 134685041 134686036 -31964260 - L1Md_T LINE L1 0 6582 5587 3 1612 304 289 70 30 chrX 134687652 134687752 -31962544 - MIR3 SINE MIR -28 180 77 3 1612 495 130 40 8 chrX 134688342 134688466 -31961830 + (TA)n Simple_repeat Simple_repeat 1 128 0 3 1612 360 315 0 67 chrX 134690334 134690453 -31959843 + PB1D10 SINE Alu 2 112 -5 3 1612 248 324 0 0 chrX 134691740 134691808 -31958488 + MER81 DNA AcHobo 2 69 -45 3 1612 1359 73 5 30 chrX 134692036 134692235 -31958061 - B2_Mm2 SINE B2 0 195 2 3 1612 359 337 41 33 chrX 134692319 134692546 -31957750 + MIR SINE MIR 37 267 -1 3 1612 523 310 0 7 chrX 134692961 134693107 -31957189 - B1F1 SINE Alu -2 147 3 3 1612 239 331 112 39 chrX 134693610 134693789 -31956507 + MIR SINE MIR 45 236 -26 3 1612 251 93 23 0 chrX 134694282 134694325 -31955971 + (GAAAA)n Simple_repeat Simple_repeat 3 46 0 3 1612 210 314 0 75 chrX 134695555 134695648 -31954648 - MIR SINE MIR -119 143 58 3 1612 222 306 59 35 chrX 134695907 134696019 -31954277 + MIRb SINE MIR 91 209 -59 3 1612 234 0 0 0 chrX 134696039 134696065 -31954231 + (TA)n Simple_repeat Simple_repeat 1 26 0 3 1612 252 0 0 0 chrX 134696065 134696092 -31954204 + (GA)n Simple_repeat Simple_repeat 2 29 0 3 1612 1152 253 195 46 chrX 134696093 134696362 -31953934 - MLT2B4 LTR ERVL -32 524 199 3 1612 477 0 0 0 chrX 134696362 134696415 -31953881 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1612 1152 253 195 46 chrX 134696415 134696601 -31953695 - MLT2B4 LTR ERVL -358 198 3 3 1612 492 72 0 0 chrX 134696975 134697044 -31953252 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 1612 21 36 0 0 chrX 134698477 134698505 -31951791 + AT_rich Low_complexity Low_complexity 1 28 0 3 1612 616 12 25 0 chrX 134699268 134699349 -31950947 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 3 1612 2199 58 0 0 chrX 134699574 134699848 -31950448 + L1_Mus1 LINE L1 6294 6567 0 3 1612 353 75 19 0 chrX 134699906 134699959 -31950337 + (GAAA)n Simple_repeat Simple_repeat 2 55 0 3 1612 1615 204 85 92 chrX 134700566 134700988 -31949308 + MTC LTR MaLR 1 419 -2 3 1612 435 226 125 117 chrX 134701370 134701626 -31948670 + L1M2 LINE L1 5106 5363 -780 3 1612 1111 81 0 0 chrX 134701626 134701774 -31948522 + B1_Mus1 SINE Alu 1 148 0 3 1612 1459 266 89 37 chrX 134701790 134702289 -31948007 + L1MA8 LINE L1 5281 5780 -511 3 1612 183 80 0 0 chrX 134702289 134702314 -31947982 + (TATG)n Simple_repeat Simple_repeat 4 28 0 3 1612 1459 289 57 67 chrX 134702314 134702789 -31947507 + L1MA8 LINE L1 5781 6267 -24 3 1612 202 288 0 33 chrX 134702966 134703027 -31947269 - L2 LINE L2 -832 2587 2529 3 1612 238 309 109 87 chrX 134704440 134704578 -31945718 + MIRb SINE MIR 89 229 -39 3 1612 21 36 0 0 chrX 134704987 134705015 -31945281 + AT_rich Low_complexity Low_complexity 1 28 0 3 1612 180 0 0 0 chrX 134706851 134706871 -31943425 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 3 1612 242 329 14 14 chrX 134707408 134707482 -31942814 + ID4 SINE ID 4 77 -6 3 1612 407 303 24 16 chrX 134707700 134707824 -31942472 - L4 LINE RTE -179 1850 1726 3 1612 243 88 0 0 chrX 134707832 134707866 -31942430 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1612 507 82 0 0 chrX 134708234 134708307 -31941989 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 1612 265 283 98 56 chrX 134708416 134708574 -31941722 + MIRb SINE MIR 27 190 -86 3 1612 225 83 0 0 chrX 134709384 134709420 -31940876 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 1612 427 219 47 9 chrX 134710787 134710893 -31939403 - L1MC3 LINE L1 -462 7323 7214 3 1612 441 339 25 0 chrX 134710901 134711022 -31939274 - B1_Mur2 SINE Alu -25 124 1 3 1612 875 289 89 35 chrX 134711025 134711517 -31938779 - L1MC3 LINE L1 -600 7185 6667 3 1612 258 325 0 0 chrX 134711555 134711635 -31938661 - ID4_ SINE ID -1 82 3 3 1612 405 0 0 0 chrX 134712043 134712088 -31938208 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1612 5613 105 15 45 chrX 134712324 134713268 -31937028 - MusHAL1 LINE L1 -5 2707 1792 3 1612 29519 95 11 53 chrX 134713264 134719547 -31930749 - L1Md_F2 LINE L1 0 6582 568 3 1612 21 57 0 0 chrX 134721374 134721409 -31928887 + AT_rich Low_complexity Low_complexity 1 35 0 3 1612 281 211 60 16 chrX 134721697 134721880 -31928416 - RMER17C LTR ERVK -135 275 85 3 1612 398 204 11 0 chrX 134721882 134721975 -31928321 + GA-rich Low_complexity Low_complexity 2 95 0 3 1612 334 349 22 60 chrX 134722136 134722319 -31927977 + L2 LINE L2 1099 1274 -2145 3 1612 4592 116 76 43 chrX 134722362 134723444 -31926852 - L1_Mus4 LINE L1 -20 6616 5448 3 1612 514 354 170 3 chrX 134723466 134723837 -31926459 + L2 LINE L2 1303 1735 -1684 3 1612 203 239 22 0 chrX 134723943 134723989 -31926307 + L2 LINE L2 1965 2011 -1408 3 1612 1595 161 100 26 chrX 134723993 134724053 -31926243 - RMER16 LTR ERVK 0 533 473 3 1612 507 45 0 0 chrX 134724053 134724119 -31926177 + (GAAAA)n Simple_repeat Simple_repeat 2 67 0 3 1612 1595 161 76 17 chrX 134724119 134724435 -31925861 - RMER16 LTR ERVK -61 472 1 3 1612 297 386 21 55 chrX 134725663 134725934 -31924362 - L2a LINE L2 -111 3264 3016 3 1612 1158 304 41 11 chrX 134726267 134726899 -31923397 + L1MA4A LINE L1 4404 5050 -830 3 1612 30 0 0 0 chrX 134727020 134727050 -31923246 + AT_rich Low_complexity Low_complexity 1 30 0 3 1612 351 291 70 51 chrX 134727074 134727351 -31922945 + L1MA4A LINE L1 5367 5614 -266 3 1612 207 0 0 0 chrX 134727369 134727392 -31922904 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1612 201 39 0 0 chrX 134727400 134727426 -31922870 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 1612 230 250 151 11 chrX 134727428 134727521 -31922775 + L1MA4A LINE L1 5720 5825 -472 3 1612 706 270 27 13 chrX 134727519 134727744 -31922552 + L1Md_F3 LINE L1 240 467 -6260 3 1612 33996 60 3 1 chrX 134727752 134732579 -31917717 + L1Md_F3 LINE L1 657 5588 -298 3 1612 7897 50 5 0 chrX 134732580 134733559 -31916737 + L1Md_F3 LINE L1 5590 6573 -14 3 1612 406 250 35 11 chrX 134733569 134733701 -31916595 + L1MA4A LINE L1 5814 5946 -354 3 1612 243 97 0 0 chrX 134733739 134733770 -31916526 - L1_Mus3 LINE L1 -408 6230 6200 3 1612 2756 88 13 3 chrX 134733771 134734157 -31916139 + L1_Mus3 LINE L1 6246 6635 -3 3 1612 1126 58 0 0 chrX 134734538 134734676 -31915620 + B1_Mus1 SINE Alu 5 142 -6 3 1612 547 141 0 0 chrX 134734880 134734965 -31915331 - URR1B DNA MER1_type -4 221 137 3 1612 243 0 0 0 chrX 134734965 134734992 -31915304 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 3 1612 950 129 26 0 chrX 134734993 134735148 -31915148 - B2_Mm2 SINE B2 -36 159 1 3 1612 512 179 53 0 chrX 134735148 134735243 -31915053 - URR1B DNA MER1_type -82 143 44 3 1612 207 329 29 99 chrX 134735487 134735659 -31914637 - MIRb SINE MIR -69 199 40 3 1612 716 259 0 0 chrX 134736068 134736215 -31914081 - B1_Mur1 SINE Alu 0 149 3 3 1612 518 336 14 0 chrX 134736835 134736981 -31913315 - B3A SINE B2 -50 148 1 3 1612 198 0 0 0 chrX 134737822 134737844 -31912452 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1612 215 130 65 0 chrX 134738084 134738114 -31912182 + T-rich Low_complexity Low_complexity 20 52 0 3 1612 201 94 0 0 chrX 134738114 134738146 -31912150 + (TTGG)n Simple_repeat Simple_repeat 1 32 0 3 1612 215 130 65 0 chrX 134738146 134738161 -31912135 + T-rich Low_complexity Low_complexity 5 19 0 3 1612 523 259 17 17 chrX 134738161 134738279 -31912017 - ID_B1 SINE B4 -26 198 81 3 1612 180 0 0 0 chrX 134738441 134738461 -31911835 + (TAA)n Simple_repeat Simple_repeat 2 21 0 3 1612 294 335 132 13 chrX 134738919 134738936 -31911360 - B3A SINE B2 -28 170 2 3 1612 715 241 8 8 chrX 134738936 134739070 -31911226 - RSINE1 SINE B4 -29 136 3 3 1612 504 326 14 0 chrX 134739242 134739383 -31910913 - B1F1 SINE Alu 0 149 7 3 1612 553 312 26 36 chrX 134740514 134740707 -31909589 + MER20 DNA MER1_type 5 195 -24 3 1612 483 366 0 0 chrX 134741768 134741902 -31908394 + ID_B1 SINE B4 84 217 -7 3 1613 446 103 13 0 chrX 134742421 134742499 -31907797 + (CA)n Simple_repeat Simple_repeat 2 80 0 3 1613 215 186 0 41 chrX 134744100 134744173 -31906123 + C-rich Low_complexity Low_complexity 2 71 0 3 1613 911 70 8 0 chrX 134744535 134744663 -31905633 + (CA)n Simple_repeat Simple_repeat 2 130 0 3 1613 222 37 0 0 chrX 134744886 134744913 -31905383 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1613 447 304 128 22 chrX 134744941 134745308 -31904988 - MER57D LTR ERV1 -2 409 4 3 1613 572 359 16 22 chrX 134745616 134745801 -31904495 + B3A SINE B2 13 196 -2 3 1613 1085 89 7 0 chrX 134745902 134746048 -31904248 + B1_Mus1 SINE Alu 2 148 0 3 1613 180 0 0 0 chrX 134746110 134746130 -31904166 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 3 1613 240 191 233 67 chrX 134746142 134746232 -31904064 + LTR40b LTR ERVL 358 462 0 3 1613 222 327 47 19 chrX 134746293 134746399 -31903897 - MIR3 SINE MIR -90 118 10 3 1613 462 36 0 0 chrX 134746621 134746677 -31903619 + (CAAAG)n Simple_repeat Simple_repeat 2 57 0 3 1613 207 0 0 0 chrX 134746677 134746699 -31903597 + (CAAAA)n Simple_repeat Simple_repeat 5 27 0 3 1613 788 274 0 64 chrX 134747048 134747235 -31903061 + B3 SINE B2 2 176 -40 3 1613 659 305 39 0 chrX 134747398 134747601 -31902695 - B3 SINE B2 -5 211 1 3 1613 3748 70 4 2 chrX 134747625 134748113 -31902183 - L1_Mus3 LINE L1 0 6638 6150 3 1613 923 289 48 60 chrX 134748905 134749237 -31901059 + MER2 DNA MER2_type 17 344 -1 3 1613 21 0 0 0 chrX 134750545 134750566 -31899730 + AT_rich Low_complexity Low_complexity 1 21 0 3 1613 1964 345 67 33 chrX 134750568 134750692 -31899604 - Lx9 LINE L1 -9 7464 7329 3 1613 243 79 0 0 chrX 134750692 134750730 -31899566 + (TCTG)n Simple_repeat Simple_repeat 2 39 0 3 1613 312 120 0 0 chrX 134750732 134750782 -31899514 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1613 2725 311 40 21 chrX 134750782 134751823 -31898473 - Lx9 LINE L1 -188 7456 6257 3 1613 204 125 0 0 chrX 134751987 134752019 -31898277 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1613 917 223 17 30 chrX 134752019 134752250 -31898046 - Lx7 LINE L1 -243 7453 7226 3 1613 4214 68 2 204 chrX 134752247 134752575 -31897721 - MusHAL1 LINE L1 -1780 932 637 3 1613 261 0 0 0 chrX 134752575 134752604 -31897692 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1613 970 102 0 28 chrX 134752604 134752745 -31897551 - B1_Mus1 SINE Alu -10 138 2 4 1613 4214 68 2 204 chrX 134752745 134753364 -31896932 - MusHAL1 LINE L1 -2076 636 177 3 1613 614 202 35 0 chrX 134753364 134753478 -31896818 - B3 SINE B2 -98 118 1 4 1613 264 290 14 0 chrX 134754104 134754173 -31896123 - MTE2b LTR MaLR -309 70 1 4 1613 205 246 123 0 chrX 134754599 134754656 -31895640 - L3b LINE CR1 -140 342 279 4 1613 206 191 15 45 chrX 134755323 134755389 -31894907 + A-rich Low_complexity Low_complexity 1 64 0 4 1613 185 418 37 0 chrX 134756382 134756516 -31893780 - MIRb SINE MIR -14 254 116 4 1613 1134 96 6 29 chrX 134756530 134756701 -31893595 - B2_Mm2 SINE B2 -26 169 3 4 1613 794 272 108 58 chrX 134757174 134757690 -31892606 - L1MA6 LINE L1 -43 6257 5716 4 1613 196 328 15 15 chrX 134757774 134757839 -31892457 - MIRb SINE MIR -95 173 109 4 1613 5966 173 20 124 chrX 134759434 134759836 -31890460 + L1_Mur2 LINE L1 4466 4867 -1010 4 1613 258 32 0 0 chrX 134759836 134759867 -31890429 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 4 1613 5966 173 20 124 chrX 134759867 134760449 -31889847 + L1_Mur2 LINE L1 4868 5420 -457 4 1613 509 193 0 125 chrX 134760415 134760449 -31889847 + MT2B LTR ERVL 139 155 -446 4 1613 973 103 0 52 chrX 134760449 134760583 -31889713 + B1_Mm SINE Alu 1 134 -13 4 1613 1955 34 13 0 chrX 134760583 134760822 -31889474 + L1Md_F2 LINE L1 6338 6579 -3 4 1613 300 91 0 0 chrX 134760822 134760866 -31889430 + (CTAAA)n Simple_repeat Simple_repeat 3 46 0 4 1613 973 103 0 52 chrX 134760866 134760884 -31889412 + B1_Mm SINE Alu 135 145 -2 4 1613 5966 173 20 124 chrX 134760884 134761273 -31889023 + L1_Mur2 LINE L1 5421 5833 -44 4 1613 16279 140 5 8 chrX 134761275 134764665 -31885631 + L1VL2 LINE L1 395 4072 -1811 4 1613 597 28 0 0 chrX 134764913 134764984 -31885312 + (TC)n Simple_repeat Simple_repeat 2 72 0 4 1613 183 80 0 0 chrX 134764984 134765008 -31885288 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1613 291 277 0 24 chrX 134765356 134765441 -31884855 - ID2 SINE ID 0 83 1 4 1613 356 377 14 0 chrX 134766190 134766336 -31883960 - RSINE1 SINE B4 -16 149 2 4 1613 309 305 51 46 chrX 134766347 134766543 -31883753 - L1MCb LINE L1 -5346 699 503 4 1613 183 273 48 72 chrX 134766915 134766998 -31883298 - MIRc SINE MIR 0 268 188 4 1613 450 0 0 0 chrX 134771354 134771404 -31878892 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 1613 4392 104 29 21 chrX 134773205 134773933 -31876363 + RMER17A LTR ERVK 1 734 -17 4 1613 369 0 0 0 chrX 134774263 134774304 -31875992 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 1613 822 141 0 0 chrX 134774389 134774531 -31875765 + (TA)n Simple_repeat Simple_repeat 1 142 0 4 1613 189 0 0 0 chrX 134775681 134775702 -31874594 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 4 1613 459 0 0 0 chrX 134775740 134775791 -31874505 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 4 1613 565 285 28 7 chrX 134776164 134776309 -31873987 - B1_Mur1 SINE Alu 0 149 2 4 1613 237 108 81 0 chrX 134776779 134776816 -31873480 - LTR90A LTR LTR -432 544 505 4 1613 3162 31 0 20 chrX 134777012 134777409 -31872887 - L1Md_F2 LINE L1 -2 6580 6192 4 1613 211 309 49 98 chrX 134778551 134778734 -31871562 - MIRb SINE MIR -70 198 25 4 1613 632 48 12 0 chrX 134778982 134779066 -31871230 + (TTTTC)n Simple_repeat Simple_repeat 2 86 0 4 1613 1037 96 0 0 chrX 134779069 134779204 -31871092 - B1_Mus1 SINE Alu -12 136 2 4 1613 387 0 0 0 chrX 134779653 134779696 -31870600 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1613 297 0 0 0 chrX 134779696 134779728 -31870568 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 1613 428 172 79 87 chrX 134780020 134780147 -31870149 + MT2B LTR ERVL 153 278 -323 4 1613 960 75 2 2 chrX 134780035 134780174 -31870122 + B1_Mus1 SINE Alu 11 148 0 4 1613 245 29 29 0 chrX 134780176 134780210 -31870086 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 4 1613 219 139 0 0 chrX 134781121 134781157 -31869139 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 4 1613 505 258 267 29 chrX 134781187 134781359 -31868937 + ID_B1 SINE B4 4 216 -8 4 1613 475 304 35 21 chrX 134781657 134781798 -31868498 - B4A SINE B4 -45 247 105 4 1613 651 26 0 0 chrX 134781802 134781879 -31868417 + (TC)n Simple_repeat Simple_repeat 1 77 0 4 1613 189 0 0 0 chrX 134782190 134782211 -31868085 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1613 693 244 33 22 chrX 134782264 134782448 -31867848 - L2 LINE L2 -908 2511 2326 4 1613 206 232 42 42 chrX 134782818 134782890 -31867406 - MIRc SINE MIR -119 149 78 4 1613 232 378 65 30 chrX 134783274 134783443 -31866853 - MIRb SINE MIR -68 200 26 4 1613 397 273 138 56 chrX 134784078 134784346 -31865950 - B4 SINE B4 -2 290 1 4 1613 637 220 54 34 chrX 134785074 134785278 -31865018 - Lx2B LINE L1 -17 6983 6788 4 1613 3417 167 10 26 chrX 134786056 134786659 -31863637 + RLTR17 LTR ERVK 100 692 0 4 1613 378 426 14 0 chrX 134786686 134786834 -31863462 - RSINE1 SINE B4 -13 152 3 4 1613 188 318 48 0 chrX 134786927 134786990 -31863306 - MIRm SINE MIR -3 273 208 4 1613 252 0 0 0 chrX 134786992 134787020 -31863276 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 4 1613 423 0 0 0 chrX 134787025 134787072 -31863224 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1613 601 334 64 22 chrX 134787506 134787916 -31862380 - L2a LINE L2 -271 3155 2732 4 1613 28 29 0 0 chrX 134788371 134788406 -31861890 + AT_rich Low_complexity Low_complexity 1 35 0 4 1613 568 152 78 179 chrX 134788406 134788663 -31861633 - Lx9 LINE L1 -8 7636 7406 4 1613 1285 213 96 37 chrX 134788665 134789041 -31861255 - RMER16 LTR ERVK -2 531 1 4 1613 1380 203 35 3 chrX 134789042 134789329 -31860967 - Lx9 LINE L1 -234 7410 7115 4 1613 39 38 0 0 chrX 134789333 134789386 -31860910 + AT_rich Low_complexity Low_complexity 1 53 0 4 1613 181 384 155 11 chrX 134789386 134789573 -31860723 - L2a LINE L2 -824 2595 2382 4 1613 1327 272 118 26 chrX 134791457 134792069 -31858227 + Charlie1a DNA MER1_type 745 1412 -43 4 1613 980 188 43 0 chrX 134792097 134792283 -31858013 - Lx4A LINE L1 -4 7054 6861 4 1613 349 356 0 81 chrX 134792325 134792499 -31857797 - RSINE1 SINE B4 -2 163 4 4 1613 341 332 70 4 chrX 134792594 134792821 -31857475 - L1M2 LINE L1 -864 5279 5038 4 1613 21 0 0 0 chrX 134792850 134792871 -31857425 + AT_rich Low_complexity Low_complexity 1 21 0 4 1613 509 297 47 26 chrX 134792965 134793206 -31857090 - L1MA4 LINE L1 -430 5870 5593 4 1613 2406 192 18 18 chrX 134793419 134793912 -31856384 - RLTR16 LTR ERVK -12 493 1 4 1613 30 59 0 0 chrX 134794017 134794068 -31856228 + AT_rich Low_complexity Low_complexity 1 51 0 4 1613 782 238 0 0 chrX 134794127 134794270 -31856026 + B1_Mur2 SINE Alu 6 148 -1 4 1613 396 0 0 0 chrX 134794544 134794588 -31855708 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1613 21 0 0 0 chrX 134794681 134794702 -31855594 + AT_rich Low_complexity Low_complexity 1 21 0 4 1613 624 122 0 0 chrX 134795933 134796056 -31854240 + (TC)n Simple_repeat Simple_repeat 2 124 0 4 1613 252 368 11 22 chrX 134796278 134796367 -31853929 - B1F1 SINE Alu -52 97 10 4 1613 1567 282 93 15 chrX 134797038 134797564 -31852732 - Lx8 LINE L1 -1 7472 6906 4 1613 269 338 59 27 chrX 134797657 134797876 -31852420 + MER112 DNA MER1_type 23 248 -13 4 1613 400 297 13 7 chrX 134798308 134798457 -31851839 - Lx6 LINE L1 -26 7434 7285 4 1613 747 296 108 0 chrX 134798438 134798688 -31851608 + Lx6 LINE L1 7007 7283 -177 4 1613 24 0 0 0 chrX 134798694 134798718 -31851578 + AT_rich Low_complexity Low_complexity 1 24 0 4 1613 1054 227 111 36 chrX 134798729 134799121 -31851175 + Lx2B LINE L1 6210 6931 -45 4 1613 2741 96 52 75 chrX 134799180 134799662 -31850634 - L1_Mus3 LINE L1 -20 6618 6148 4 1613 228 408 18 65 chrX 134800019 134800187 -31850109 + MIR3 SINE MIR 21 180 -28 4 1613 183 306 69 0 chrX 134800249 134800321 -31849975 - L2a LINE L2 -71 3355 3279 4 1613 375 73 0 0 chrX 134800339 134800394 -31849902 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1613 226 345 26 52 chrX 134800542 134800695 -31849601 - L2a LINE L2 -1354 2065 1917 4 1613 690 154 16 16 chrX 134800719 134800844 -31849452 + B1_Mur4 SINE Alu 26 150 0 4 1613 239 88 28 42 chrX 134800844 134800915 -31849381 + (CAAA)n Simple_repeat Simple_repeat 1 70 0 4 1613 32 43 0 0 chrX 134801095 134801141 -31849155 + AT_rich Low_complexity Low_complexity 1 46 0 4 1613 216 0 24 71 chrX 134801190 134801232 -31849064 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 4 1613 449 253 26 20 chrX 134801241 134801394 -31848902 + L1MB1 LINE L1 6011 6164 -25 4 1613 6714 121 66 3 chrX 134801479 134802568 -31847728 - Lx2A1 LINE L1 -11 6997 5840 4 1613 2969 178 13 4 chrX 134802570 134803116 -31847180 + Lx2A1 LINE L1 5309 5859 -27 4 1613 201 154 0 0 chrX 134803172 134803211 -31847085 + T-rich Low_complexity Low_complexity 1 39 0 4 1613 24 0 0 0 chrX 134803960 134803984 -31846312 + AT_rich Low_complexity Low_complexity 1 24 0 4 1613 372 317 62 46 chrX 134804069 134804373 -31845923 - L1MC4 LINE L1 -30 8012 7704 4 1613 2175 115 25 0 chrX 134804483 134804804 -31845492 + ORR1A4 LTR MaLR 1 329 0 4 1613 327 204 64 0 chrX 134805297 134805395 -31844901 + L1M4 LINE L1 2365 2465 -3681 4 1613 918 309 63 3 chrX 134805405 134805736 -31844560 - Lx9 LINE L1 -610 7034 6684 4 1613 596 305 18 26 chrX 134805751 134806088 -31844208 + Lx9 LINE L1 7055 7425 -219 4 1613 186 43 0 0 chrX 134806088 134806111 -31844185 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1613 322 237 40 0 chrX 134806338 134806414 -31843882 - PB1D10 SINE Alu -21 96 18 4 1613 25 0 0 0 chrX 134806508 134806533 -31843763 + AT_rich Low_complexity Low_complexity 1 25 0 4 1613 23 0 0 0 chrX 134806706 134806729 -31843567 + AT_rich Low_complexity Low_complexity 1 23 0 4 1613 7435 40 0 0 chrX 134806771 134807658 -31842638 + L1Md_F2 LINE L1 5679 6565 -17 4 1613 540 343 28 0 chrX 134808784 134808927 -31841369 - RSINE1 SINE B4 -10 155 9 4 1613 333 68 0 0 chrX 134809043 134809087 -31841209 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 5 1613 422 176 28 0 chrX 134809301 134809409 -31840887 - L1_Mus3 LINE L1 0 6638 6528 5 1613 7050 90 5 2 chrX 134809419 134810652 -31839644 + L1_Mus3 LINE L1 5275 6511 -127 5 1613 5164 51 3 0 chrX 134810824 134811466 -31838830 + L1Md_F2 LINE L1 5937 6580 -2 5 1613 1130 313 95 28 chrX 134811466 134811963 -31838333 - Lx8 LINE L1 -12 7461 6932 5 1613 954 97 20 34 chrX 134812683 134812832 -31837464 - B1_Mus2 SINE Alu 0 147 1 5 1613 570 326 40 48 chrX 134813888 134814242 -31836054 - RLTR23 LTR ERV1 0 430 80 5 1613 377 226 37 19 chrX 134814292 134814400 -31835896 - RLTR23 LTR ERV1 -318 112 3 5 1613 302 42 0 41 chrX 134814741 134814790 -31835506 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 5 1613 1161 30 0 0 chrX 134814790 134814925 -31835371 - B1_Mus2 SINE Alu -10 137 3 5 1613 383 56 19 0 chrX 134814942 134814996 -31835300 + (CTA)n Simple_repeat Simple_repeat 1 55 0 5 1613 288 0 0 0 chrX 134814996 134815028 -31835268 + (TAA)n Simple_repeat Simple_repeat 3 34 0 5 1613 234 164 0 0 chrX 134815136 134815191 -31835105 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 1613 237 369 36 0 chrX 134817082 134817166 -31833130 - Lx8 LINE L1 -200 7273 7187 5 1613 270 266 29 82 chrX 134817161 134817308 -31832988 + L1_Mur3 LINE L1 5096 5268 -612 5 1613 306 356 22 15 chrX 134817331 134817465 -31832831 + RMER15 LTR ERVL 336 470 -105 5 1613 1067 285 20 69 chrX 134817473 134817880 -31832416 + L1_Mur3 LINE L1 5285 5671 -209 5 1613 1517 257 40 16 chrX 134817925 134818301 -31831995 - MTD LTR MaLR -30 389 5 5 1613 2893 34 9 117 chrX 134818465 134818902 -31831394 - RLTR10 LTR ERVK 0 390 1 5 1613 180 77 0 0 chrX 134819540 134819566 -31830730 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 5 1613 1383 275 145 9 chrX 134819569 134820141 -31830155 - L1MA6 LINE L1 -303 5997 5348 5 1613 295 355 87 42 chrX 134820291 134820579 -31829717 - L1M3e LINE L1 -6702 328 28 5 1613 206 221 84 95 chrX 134820636 134820731 -31829565 - MIR SINE MIR -94 168 75 5 1613 753 112 0 18 chrX 134820833 134820942 -31829354 - B1_Mus2 SINE Alu -39 108 2 5 1613 398 242 34 140 chrX 134820942 134821016 -31829280 - MT2B LTR ERVL -447 154 100 5 1613 261 0 0 0 chrX 134822911 134822940 -31827356 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 1613 726 60 0 0 chrX 134822940 134823039 -31827257 + (GA)n Simple_repeat Simple_repeat 1 100 0 5 1613 486 331 11 23 chrX 134824184 134824360 -31825936 - MER45A DNA Tip100 0 178 5 5 1613 2972 161 4 2 chrX 134824579 134825090 -31825206 - Lx LINE L1 0 6654 6143 5 1613 355 295 25 59 chrX 134825524 134825643 -31824653 - MLT1E1A LTR MaLR 0 680 566 5 1613 483 0 45 0 chrX 134825682 134825749 -31824547 + (TA)n Simple_repeat Simple_repeat 1 70 0 5 1613 7169 109 27 22 chrX 134825757 134826860 -31823436 - Lx3_Mus LINE L1 -305 6704 5596 5 1613 1127 136 56 0 chrX 134826868 134827082 -31823214 + L1_Mur1 LINE L1 1492 1717 -4169 5 1613 4464 65 30 2 chrX 134827079 134827678 -31822618 - L1_Mm LINE L1 -1316 4567 3952 5 1613 230 272 0 12 chrX 134827675 134827757 -31822539 + Lx2 LINE L1 6906 6986 -11 5 1613 7967 66 8 11 chrX 134827761 134828831 -31821465 + L1Md_F2 LINE L1 4520 5586 -297 5 1613 7613 67 7 11 chrX 134828832 134829831 -31820465 + L1Md_F2 LINE L1 5588 6582 0 5 1613 7308 96 6 2 chrX 134829831 134830908 -31819388 + L1_Mur1 LINE L1 1705 2785 -3101 5 1613 1484 292 55 35 chrX 134830913 134831573 -31818723 - Lx8 LINE L1 -72 7401 6759 5 1613 1009 231 113 61 chrX 134831579 134831767 -31818529 + ORR1C2 LTR MaLR 1 172 -212 5 1613 624 14 0 0 chrX 134831767 134831840 -31818456 + (TC)n Simple_repeat Simple_repeat 2 74 0 5 1613 1009 231 113 61 chrX 134831840 134831978 -31818318 + ORR1C2 LTR MaLR 173 344 -40 5 1613 983 64 0 0 chrX 134831978 134832103 -31818193 + B1_Mus1 SINE Alu 14 138 -10 5 1613 1005 92 0 0 chrX 134832103 134832245 -31818051 + (CAAAG)n Simple_repeat Simple_repeat 2 143 0 5 1613 1605 299 19 10 chrX 134832307 134832793 -31817503 - Lx8 LINE L1 -760 6713 6224 5 1613 32170 64 7 1 chrX 134832864 134837844 -31812452 - L1Md_F2 LINE L1 -12 6570 1559 5 1613 933 37 0 0 chrX 134837845 134837952 -31812344 - U6 snRNA snRNA 0 107 1 5 1613 249 128 0 0 chrX 134838176 134838223 -31812073 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1613 555 202 158 11 chrX 134838243 134838433 -31811863 - Lx9 LINE L1 -66 7578 7361 5 1613 447 68 0 0 chrX 134838522 134838581 -31811715 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 1613 216 0 0 0 chrX 134838581 134838604 -31811692 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1613 414 0 0 0 chrX 134838604 134838650 -31811646 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1613 1180 62 0 0 chrX 134838720 134838866 -31811430 + B1_Mus2 SINE Alu 2 147 0 5 1613 553 309 26 39 chrX 134838884 134839113 -31811183 - L1M4 LINE L1 -474 5704 5479 5 1613 361 315 0 0 chrX 134839183 134839272 -31811024 + PB1D10 SINE Alu 20 108 -9 5 1613 231 221 88 0 chrX 134839420 134839488 -31810808 + L1MA6 LINE L1 6091 6164 -136 5 1613 578 252 17 0 chrX 134839619 134839738 -31810558 + B3 SINE B2 54 174 -42 5 1613 266 290 10 20 chrX 134839747 134839849 -31810447 - L1M4 LINE L1 -1363 4783 4683 5 1613 189 0 0 0 chrX 134840255 134840276 -31810020 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 1613 639 385 68 59 chrX 134840296 134840751 -31809545 - LTR16B2 LTR ERVL 0 462 4 5 1613 5213 132 1 10 chrX 134841133 134841946 -31808350 - Lx LINE L1 -10 6644 5839 5 1613 2341 153 11 0 chrX 134841950 134842330 -31807966 + Lx LINE L1 5482 5865 -18 5 1613 1091 82 0 0 chrX 134843099 134843245 -31807051 + B1_Mus1 SINE Alu 2 147 -1 5 1613 190 51 0 71 chrX 134843247 134843289 -31807007 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1613 324 19 57 0 chrX 134843672 134843725 -31806571 + (TTTTG)n Simple_repeat Simple_repeat 1 56 0 5 1613 239 292 0 27 chrX 134844068 134844142 -31806154 - MIR3 SINE MIR -14 194 123 5 1613 307 315 86 33 chrX 134844789 134844940 -31805356 + MER5A1 DNA MER1_type 8 166 0 5 1613 964 191 0 0 chrX 134846631 134846804 -31803492 + Lx4A LINE L1 6175 6347 -711 5 1613 3044 124 52 8 chrX 134846832 134846948 -31803348 - Lx LINE L1 -6 6648 6519 5 1613 225 0 0 0 chrX 134846948 134846973 -31803323 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 5 1613 3044 124 52 8 chrX 134846973 134847336 -31802960 - Lx LINE L1 -136 6518 6148 5 1613 4150 67 18 16 chrX 134847336 134847956 -31802340 + MusHAL1 LINE L1 276 896 -1816 5 1613 4248 145 45 9 chrX 134847956 134848653 -31801643 + Lx4A LINE L1 6337 7058 0 5 1613 909 69 8 0 chrX 134848673 134848803 -31801493 + L1_Mus2 LINE L1 6436 6566 0 5 1613 692 172 52 7 chrX 134848858 134848993 -31801303 + B1_Mur2 SINE Alu 9 149 0 5 1613 656 25 0 0 chrX 134848995 134849075 -31801221 + B1_Mus2 SINE Alu 68 147 0 5 1613 190 83 0 77 chrX 134849082 134849134 -31801162 + A-rich Low_complexity Low_complexity 4 51 0 5 1613 230 264 65 136 chrX 134849767 134849951 -31800345 + MER67B LTR ERV1 63 233 -428 5 1613 3356 240 50 28 chrX 134849966 134850896 -31799400 - Lx2B LINE L1 -6 6994 6044 5 1613 8785 140 37 8 chrX 134850895 134852568 -31797728 + Lx2B LINE L1 4319 6044 -956 5 1613 1160 104 60 16 chrX 134852954 134853139 -31797157 - B2_Mm2 SINE B2 -2 193 1 5 1613 37520 17 1 7 chrX 134853276 134858231 -31792065 + L1Md_A LINE L1 666 5586 -297 5 1613 8611 19 2 0 chrX 134858233 134859225 -31791071 + L1Md_A LINE L1 5589 6582 0 5 1613 350 147 0 14 chrX 134859262 134859331 -31790965 + GA-rich Low_complexity Low_complexity 6 73 0 5 1613 3898 55 4 4 chrX 134859347 134859839 -31790457 + L1Md_F2 LINE L1 6090 6581 -1 5 1613 36 40 0 0 chrX 134860240 134860290 -31790006 + AT_rich Low_complexity Low_complexity 1 50 0 5 1613 1523 227 42 24 chrX 134860290 134860731 -31789565 - Lx2B LINE L1 -2 6974 6505 5 1613 530 296 16 0 chrX 134861190 134861315 -31788981 - B1_Mur1 SINE Alu -20 129 3 5 1613 312 245 56 39 chrX 134862352 134862512 -31787784 + L1M3 LINE L1 4917 5081 -766 5 1613 1143 294 28 81 chrX 134862619 134863289 -31787007 + L1MA4A LINE L1 5290 5924 -379 5 1613 243 152 0 0 chrX 134863320 134863366 -31786930 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1613 225 65 0 0 chrX 134863629 134863660 -31786636 + (CATATA)n Simple_repeat Simple_repeat 5 35 0 5 1613 393 221 0 44 chrX 134863685 134863775 -31786521 - Lx9 LINE L1 -327 7317 7232 5 1613 549 0 0 0 chrX 134864395 134864456 -31785840 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 1613 498 326 42 7 chrX 134864466 134864608 -31785688 - B3 SINE B2 -69 147 1 5 1613 213 39 0 0 chrX 134865204 134865230 -31785066 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 1613 2573 217 31 38 chrX 134865498 134865975 -31784321 + RLTR20B3 LTR ERVK 2 471 -106 5 1613 420 20 0 0 chrX 134865975 134866024 -31784272 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1613 2573 217 31 38 chrX 134866024 134866126 -31784170 + RLTR20B3 LTR ERVK 472 576 -1 5 1613 316 364 56 21 chrX 134866534 134866677 -31783619 + MER97c DNA MER1_type? 20 167 -923 5 1613 201 74 0 0 chrX 134866758 134866785 -31783511 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1613 614 348 30 15 chrX 134867048 134867381 -31782915 + L2a LINE L2 2387 2724 -695 5 1613 278 257 13 13 chrX 134867391 134867466 -31782830 + L2a LINE L2 3084 3158 -268 5 1613 825 254 12 0 chrX 134867759 134867932 -31782364 + Lx8 LINE L1 6960 7134 -339 5 1613 872 298 84 19 chrX 134868012 134868320 -31781976 + Lx8 LINE L1 7142 7469 -4 5 1613 12567 97 18 10 chrX 134868885 134871494 -31778802 - L1_Mus2 LINE L1 0 6566 3935 5 1613 3270 96 8 6 chrX 134871521 134871936 -31778360 - MusHAL1 LINE L1 -759 1953 1536 5 1613 224 30 30 0 chrX 134871936 134871969 -31778327 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 5 1613 3270 96 8 6 chrX 134871969 134872047 -31778249 - MusHAL1 LINE L1 -1177 1535 1459 5 1613 2539 188 104 24 chrX 134872106 134872743 -31777553 + RMER6C LTR ERVK 3 690 0 5 1614 1802 232 7 68 chrX 134874156 134874595 -31775701 + MTD LTR MaLR 6 417 -2 5 1614 253 293 53 0 chrX 134874999 134875074 -31775222 + MIR SINE MIR 173 251 -11 5 1614 444 67 0 0 chrX 134875897 134875957 -31774339 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1614 1421 178 11 11 chrX 134876866 134877145 -31773151 + Lx2B LINE L1 6721 6999 -1 5 1614 3184 233 83 35 chrX 134877454 134878383 -31771913 + RCHARR1 DNA MER1_type 2 974 0 5 1614 369 306 59 71 chrX 134878499 134878668 -31771628 - MER20 DNA MER1_type -20 199 33 6 1614 234 0 0 0 chrX 134878701 134878727 -31771569 + (ATTG)n Simple_repeat Simple_repeat 1 26 0 6 1614 1096 163 22 35 chrX 134878975 134879204 -31771092 + URR1A DNA MER1_type 1 226 0 6 1614 734 22 11 0 chrX 134879821 134879913 -31770383 + (CA)n Simple_repeat Simple_repeat 1 93 0 6 1614 211 178 0 22 chrX 134880626 134880672 -31769624 - MIR3 SINE MIR 0 208 164 6 1614 215 361 76 8 chrX 134881246 134881377 -31768919 + L2 LINE L2 2506 2645 -774 6 1614 205 89 0 43 chrX 134882107 134882154 -31768142 + (TATAA)n Simple_repeat Simple_repeat 5 49 0 6 1614 556 301 80 0 chrX 134882370 134882569 -31767727 - ID_B1 SINE B4 -8 216 2 6 1614 396 0 0 0 chrX 134882753 134882797 -31767499 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1614 6551 50 6 4 chrX 134883495 134884334 -31765962 + L1Md_F2 LINE L1 5742 6582 0 6 1614 778 97 15 22 chrX 134884693 134884830 -31765466 + Lx LINE L1 6509 6644 -10 6 1614 1392 217 10 42 chrX 134884954 134885262 -31765034 - ORR1D1 LTR MaLR 0 374 84 6 1614 1499 266 62 73 chrX 134886415 134886561 -31763735 - MER34A LTR ERV1 -7 564 426 6 1614 234 116 0 0 chrX 134886561 134886604 -31763692 + (CAAG)n Simple_repeat Simple_repeat 2 44 0 6 1614 1499 266 62 73 chrX 134886604 134887021 -31763275 - MER34A LTR ERV1 -146 425 7 6 1614 601 335 75 31 chrX 134887051 134887344 -31762952 + MLT1A0 LTR MaLR 10 315 -50 6 1614 23 0 0 0 chrX 134887580 134887603 -31762693 + AT_rich Low_complexity Low_complexity 1 23 0 6 1614 498 271 115 8 chrX 134887739 134887869 -31762427 - MTEa LTR MaLR -12 367 224 6 1614 4084 87 16 0 chrX 134888070 134888621 -31761675 - L1_Mus4 LINE L1 -441 6195 5636 6 1614 2202 120 70 45 chrX 134888621 134889022 -31761274 - IAPLTR2a LTR ERVK 0 411 1 6 1614 6813 41 4 6 chrX 134889022 134889853 -31760443 - IAPEz-int LTR ERVK 0 6481 5653 6 1614 2633 76 0 3 chrX 134889848 134890191 -31760105 - IAPEz-int LTR ERVK -4781 1700 1359 6 1614 3784 67 2 18 chrX 134890191 134890694 -31759602 - IAPEz-int LTR ERVK -5819 662 168 6 1614 237 302 0 0 chrX 134890694 134890747 -31759549 - RLTR27 LTR ERVK -34 275 223 6 1614 227 267 0 0 chrX 134890775 134890820 -31759476 - RLTR27 LTR ERVK -34 275 231 6 1614 528 117 105 97 chrX 134890820 134890934 -31759362 - IAPEz-int LTR ERVK -6358 123 9 6 1614 2212 118 70 45 chrX 134890935 134891336 -31758960 - IAPLTR2a LTR ERVK 0 411 1 6 1614 256 94 0 0 chrX 134891336 134891368 -31758928 - L1_Mus4 LINE L1 -995 5641 5610 6 1614 2904 103 7 2 chrX 134891368 134891787 -31758509 + L1_Mus4 LINE L1 6209 6629 -7 6 1614 2571 97 74 0 chrX 134892683 134892859 -31757437 - BGLII_Mus LTR ERVK -2 420 222 6 1614 1362 40 0 0 chrX 134892859 134893036 -31757260 + (TC)n Simple_repeat Simple_repeat 2 178 0 6 1614 2571 97 74 0 chrX 134893036 134893250 -31757046 - BGLII_Mus LTR ERVK -201 221 2 6 1614 3100 173 93 44 chrX 134893251 134893428 -31756868 - RMER3D-int LTR ERVK -1 2325 2157 6 1614 5138 81 28 0 chrX 134893428 134894110 -31756186 - L1_Mus2 LINE L1 -1 6565 5865 6 1614 4378 194 76 52 chrX 134894110 134895309 -31754987 - RMER3D-int LTR ERVK -184 2658 1438 6 1614 1598 146 38 35 chrX 134895309 134895628 -31754668 + RLTR46 LTR ERVK 1 320 0 6 1614 4378 203 158 50 chrX 134895628 134896074 -31754222 - RMER3D-int LTR ERVK -1344 1498 1014 6 1614 600 148 61 0 chrX 134896095 134896210 -31754086 - RMER3D-int LTR ERVK -2232 610 489 6 1614 571 188 0 27 chrX 134896343 134896491 -31753805 - RMER3D-int LTR ERVK -1991 851 708 6 1614 2600 93 89 10 chrX 134896901 134897098 -31753198 - BGLII_Mus LTR ERVK 0 422 192 6 1614 540 0 0 0 chrX 134897098 134897158 -31753138 + (TC)n Simple_repeat Simple_repeat 1 60 0 6 1614 2600 93 89 10 chrX 134897158 134897351 -31752945 - BGLII_Mus LTR ERVK -231 191 2 6 1614 196 276 17 0 chrX 134897621 134897679 -31752617 + MIRc SINE MIR 80 138 -130 6 1614 4121 192 76 88 chrX 134898242 134899337 -31750959 + Lx2B LINE L1 5900 6981 -19 6 1614 2898 276 51 24 chrX 134899583 134900524 -31749772 - Lx8 LINE L1 -29 7444 6479 6 1614 644 309 56 13 chrX 134900579 134900881 -31749415 - L1M2 LINE L1 -1030 5113 4799 6 1614 1303 269 60 8 chrX 134900947 134901300 -31748996 - MTEb LTR MaLR -8 371 1 6 1614 230 286 89 67 chrX 134901511 134901646 -31748650 - L3 LINE CR1 -311 4178 4041 6 1614 30 27 0 0 chrX 134901686 134901723 -31748573 + AT_rich Low_complexity Low_complexity 1 37 0 6 1614 5166 36 12 3 chrX 134903809 134904447 -31745849 + L1Md_F3 LINE L1 5925 6568 -16 6 1614 242 290 81 68 chrX 134905628 134905776 -31744520 + MIR SINE MIR 65 214 -48 6 1614 203 307 40 81 chrX 134905756 134905880 -31744416 - MIRc SINE MIR -36 232 114 6 1614 1162 224 26 11 chrX 134905962 134906233 -31744063 + Charlie19a DNA Charlie 29 303 -83 6 1614 284 83 0 0 chrX 134906518 134906554 -31743742 - 7SK RNA RNA -275 56 21 6 1614 1553 131 62 0 chrX 134906554 134906696 -31743600 + Lx2A1 LINE L1 6717 6858 -150 6 1614 279 0 0 0 chrX 134906696 134906727 -31743569 + (TGAG)n Simple_repeat Simple_repeat 2 32 0 6 1614 1553 131 62 0 chrX 134906727 134906859 -31743437 + Lx2A1 LINE L1 6859 7007 -1 6 1614 257 380 30 0 chrX 134907324 134907424 -31742872 - L2a LINE L2 -19 3407 3305 6 1614 626 290 67 14 chrX 134907787 134907997 -31742299 - ID_B1 SINE B4 -1 223 3 6 1614 1078 98 8 0 chrX 134908032 134908303 -31741993 + (TTCC)n Simple_repeat Simple_repeat 1 273 0 6 1614 523 309 57 26 chrX 134908305 134908498 -31741798 - B3 SINE B2 -14 202 4 6 1614 1194 304 52 44 chrX 134909553 134909662 -31740634 - Lx6 LINE L1 -30 7430 7321 6 1614 281 26 26 0 chrX 134909662 134909700 -31740596 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1614 1194 312 53 49 chrX 134909700 134910170 -31740126 - Lx6 LINE L1 -140 7320 6471 6 1614 596 347 18 0 chrX 134910167 134910386 -31739910 - Lx6 LINE L1 -693 6357 6135 6 1614 409 200 21 21 chrX 134910558 134910701 -31739595 + GA-rich Low_complexity Low_complexity 4 146 0 6 1614 507 294 113 47 chrX 134910852 134911320 -31738976 - Lx8 LINE L1 -16 7457 6959 6 1614 1666 299 8 36 chrX 134911353 134911873 -31738423 + Lx8 LINE L1 6230 6734 -739 6 1614 364 269 83 9 chrX 134912147 134912256 -31738040 + PB1D10 SINE Alu 1 117 0 6 1614 4874 49 0 11 chrX 134912338 134912955 -31737341 - L1Md_F2 LINE L1 0 6582 5973 6 1614 21 0 0 0 chrX 134913072 134913093 -31737203 + AT_rich Low_complexity Low_complexity 1 21 0 6 1614 222 291 140 107 chrX 134913379 134913529 -31736767 + RSINE1 SINE B4 11 165 0 6 1614 252 0 0 0 chrX 134913544 134913572 -31736724 + (TTAA)n Simple_repeat Simple_repeat 4 31 0 6 1614 23 0 0 0 chrX 134913633 134913656 -31736640 + AT_rich Low_complexity Low_complexity 1 23 0 6 1614 889 267 57 103 chrX 134914232 134914533 -31735763 + B4 SINE B4 6 292 0 6 1614 772 253 64 61 chrX 134914593 134914904 -31735392 + L1_Rod LINE L1 5536 5847 0 6 1614 35 41 0 0 chrX 134915210 134915259 -31735037 + AT_rich Low_complexity Low_complexity 1 49 0 6 1614 4782 237 58 20 chrX 134915299 134916445 -31733851 + Lx5 LINE L1 5854 7043 -7 6 1614 26 0 0 0 chrX 134917454 134917480 -31732816 + AT_rich Low_complexity Low_complexity 1 26 0 6 1614 42 57 0 0 chrX 134918446 134918516 -31731780 + AT_rich Low_complexity Low_complexity 1 70 0 6 1614 3956 211 32 62 chrX 134918516 134919442 -31730854 + RMER13B LTR ERVK 1 899 -9 6 1614 360 152 0 0 chrX 134919531 134919597 -31730699 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 1614 24 53 0 0 chrX 134919698 134919736 -31730560 + AT_rich Low_complexity Low_complexity 1 38 0 6 1614 306 291 25 0 chrX 134919747 134919826 -31730470 + MTE2b LTR MaLR 1 81 -298 6 1614 262 342 0 0 chrX 134919855 134919931 -31730365 + MTE2b LTR MaLR 69 144 -235 6 1614 2161 160 107 31 chrX 134919965 134920449 -31729847 - RMER6C LTR ERVK 0 690 170 6 1614 2660 293 91 39 chrX 134920452 134921900 -31728396 - Lx8 LINE L1 -409 7064 5647 6 1614 840 111 0 0 chrX 134921900 134922026 -31728270 + (TA)n Simple_repeat Simple_repeat 1 126 0 6 1614 815 231 124 44 chrX 134922026 134922206 -31728090 - Lx8 LINE L1 -201 5646 5457 6 1614 14218 91 20 30 chrX 134923509 134924388 -31725908 + L1VL4 LINE L1 1037 1907 -2007 6 1614 207 0 0 0 chrX 134924388 134924411 -31725885 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1614 14218 121 28 15 chrX 134924411 134926514 -31723782 + L1VL4 LINE L1 1908 4046 -1837 6 1614 6788 104 24 10 chrX 134926513 134927521 -31722775 + Lx LINE L1 5627 6648 -6 6 1614 193 286 99 14 chrX 134927591 134927662 -31722634 + MER5A DNA MER1_type 52 128 -61 6 1614 5601 42 3 6 chrX 134927665 134928355 -31721941 - L1Md_F3 LINE L1 -1 6583 5896 6 1614 1127 50 24 18 chrX 134928355 134928519 -31721777 - IAPEY2_LTR LTR ERVK -2 355 191 6 1614 933 59 0 0 chrX 134928510 134928629 -31721667 - IAPEY3_LTR LTR ERVK -213 119 1 6 1614 3471 61 56 0 chrX 134928629 134929361 -31720935 - IAPEY3-int LTR ERVK 0 7680 6908 6 1614 1240 110 16 0 chrX 134929363 134929545 -31720751 - IAPEY3-int LTR ERVK -4395 3285 3101 6 1614 3793 46 2 0 chrX 134929540 134929997 -31720299 - IAPEY3-int LTR ERVK -2438 5242 4785 6 1614 13352 110 12 27 chrX 134929994 134931999 -31718297 - IAPEY3-int LTR ERVK -5183 2497 524 6 1614 792 135 55 43 chrX 134931998 134932161 -31718135 - IAPLTR4_I LTR ERVK -1290 180 16 6 1614 2335 69 6 6 chrX 134932162 134932483 -31717813 - IAPEY2_LTR LTR ERVK -5 352 32 6 1614 35669 72 3 14 chrX 134932513 134938101 -31712195 - L1Md_F3 LINE L1 0 5883 395 6 1614 576 394 0 0 chrX 134938275 134938435 -31711861 + RSINE1 SINE B4 4 163 -2 6 1614 22 0 0 0 chrX 134939172 134939194 -31711102 + AT_rich Low_complexity Low_complexity 1 22 0 6 1614 287 151 0 0 chrX 134939354 134939407 -31710889 - Lx9 LINE L1 -5 7639 7587 6 1614 387 280 45 15 chrX 134939880 134940014 -31710282 + B1F SINE Alu 3 140 -9 6 1614 261 297 26 50 chrX 134940895 134940983 -31709313 - ID4 SINE ID -2 150 17 6 1614 298 250 0 0 chrX 134940983 134941043 -31709253 - tRNA-Ala-GCY_ tRNA tRNA -11 64 5 6 1614 205 143 48 0 chrX 134941069 134941111 -31709185 + GA-rich Low_complexity Low_complexity 2 45 0 6 1614 235 361 8 92 chrX 134941275 134941406 -31708890 - B3A SINE B2 -78 120 1 6 1614 231 271 0 77 chrX 134941446 134941498 -31708798 - PB1 SINE Alu -53 74 27 6 1614 22 35 0 0 chrX 134941506 134941535 -31708761 + AT_rich Low_complexity Low_complexity 1 29 0 6 1614 401 175 28 37 chrX 134941646 134941753 -31708543 - L1Md_F3 LINE L1 -1 6583 6478 6 1614 788 51 0 0 chrX 134941756 134941854 -31708442 + L1_Mus2 LINE L1 6229 6326 -240 6 1614 367 0 0 70 chrX 134941881 134941938 -31708358 + (TTTA)n Simple_repeat Simple_repeat 1 53 0 6 1614 2329 80 0 12 chrX 134941938 134942266 -31708030 - L1Md_F2 LINE L1 -40 6542 6219 6 1614 513 274 118 0 chrX 134942266 134942401 -31707895 - RSINE1 SINE B4 -14 151 1 6 1614 5148 94 14 4 chrX 134942779 134943505 -31706791 + L1_Mus1 LINE L1 5835 6567 0 6 1614 441 0 0 0 chrX 134944295 134944344 -31705952 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1614 391 336 130 0 chrX 134944776 134944922 -31705374 - MLT1A1 LTR MaLR 0 408 244 6 1614 576 77 0 0 chrX 134944981 134945059 -31705237 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 7 1614 359 256 16 49 chrX 134945068 134945191 -31705105 - HAL1-2a_MD LINE L1 -561 2463 2345 7 1614 219 36 0 0 chrX 134945744 134945772 -31704524 + (A)n Simple_repeat Simple_repeat 1 28 0 7 1614 267 292 0 0 chrX 134945827 134945892 -31704404 - ORR1D1 LTR MaLR -309 65 1 7 1614 889 182 76 40 chrX 134945893 134946116 -31704180 - ORR1D1-int LTR MaLR -1 1369 1139 7 1614 1273 245 120 12 chrX 134946138 134946472 -31703824 - ORR1D1 LTR MaLR 0 374 5 7 1614 1104 289 49 5 chrX 134946662 134947309 -31702987 - Lx6 LINE L1 -565 6895 6112 7 1614 2008 224 16 7 chrX 134947324 134947770 -31702526 + Lx6 LINE L1 5614 6063 -1397 7 1614 249 33 0 0 chrX 134948707 134948737 -31701559 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 7 1614 1448 278 67 39 chrX 134948782 134949275 -31701021 - Lx8 LINE L1 0 7473 6967 7 1614 692 247 88 0 chrX 134949288 134949470 -31700826 + Lx8 LINE L1 6337 6534 -939 7 1614 738 232 193 0 chrX 134950317 134950498 -31699798 - B3 SINE B2 0 216 1 7 1614 554 274 49 38 chrX 134950504 134950792 -31699504 - L1MA5 LINE L1 -2 6298 6008 7 1614 755 257 37 28 chrX 134951874 134952090 -31698206 - Lx6 LINE L1 -3 7457 7240 7 1614 378 164 14 14 chrX 134952089 134952163 -31698133 - Lx2 LINE L1 -95 6902 6829 7 1614 656 243 142 0 chrX 134952160 134952386 -31697910 - L1M2 LINE L1 -1457 4686 4429 7 1614 3216 138 22 17 chrX 134952386 134952925 -31697371 + Lx4A LINE L1 5695 6236 -822 7 1614 461 190 0 0 chrX 134952928 134953007 -31697289 + Lx4A LINE L1 6344 6422 -636 7 1614 1989 221 29 71 chrX 134953005 134953712 -31696584 - Lx5 LINE L1 -568 6408 5745 7 1614 330 214 122 11 chrX 134953712 134953802 -31696494 - MTE2b LTR MaLR -13 366 267 7 1614 1870 92 92 0 chrX 134953904 134954198 -31696098 + ORR1A4 LTR MaLR 1 321 -8 7 1614 278 0 54 0 chrX 134954209 134954246 -31696050 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 7 1614 1160 43 0 0 chrX 134954246 134954386 -31695910 - B1_Mus1 SINE Alu -7 141 2 7 1614 32 81 0 0 chrX 134955308 134955382 -31694914 + AT_rich Low_complexity Low_complexity 1 74 0 7 1614 27 0 0 0 chrX 134955438 134955465 -31694831 + AT_rich Low_complexity Low_complexity 1 27 0 7 1614 230 180 16 0 chrX 134955499 134955560 -31694736 + (TA)n Simple_repeat Simple_repeat 1 62 0 7 1614 7396 165 22 6 chrX 134955632 134957117 -31693179 - Lx3C LINE L1 -2 6974 5468 7 1614 419 272 0 42 chrX 134957126 134957245 -31693051 - Lx8 LINE L1 -129 7344 7231 7 1614 498 211 19 0 chrX 134957253 134957357 -31692939 - U6 snRNA snRNA 0 107 2 7 1614 630 343 92 21 chrX 134957526 134957965 -31692331 + MLT1D LTR MaLR 36 505 0 7 1614 320 297 112 43 chrX 134958094 134958326 -31691970 + Charlie5 DNA MER1_type 2375 2622 -2 7 1614 646 279 86 0 chrX 134958726 134958923 -31691373 + B3 SINE B2 1 214 -2 7 1614 238 282 0 25 chrX 134959247 134959327 -31690969 + GA-rich Low_complexity Low_complexity 3 80 0 7 1614 1005 226 76 14 chrX 134959385 134959665 -31690631 + MTD LTR MaLR 115 419 0 7 1614 6750 187 53 21 chrX 134959951 134961625 -31688671 - Lx5 LINE L1 -1 7049 5337 7 1614 479 79 0 0 chrX 134961761 134961824 -31688472 + L1_Mus2 LINE L1 6401 6463 -103 7 1614 4164 68 2 23 chrX 134961822 134962382 -31687914 - L1_Mus2 LINE L1 -53 6513 5966 7 1614 830 231 75 5 chrX 134962465 134962665 -31687631 - B3 SINE B2 -2 214 1 7 1614 327 292 110 45 chrX 134962680 134962834 -31687462 + MLT1A0 LTR MaLR 201 364 -1 7 1614 240 364 134 13 chrX 134962941 134963180 -31687116 - Lx8 LINE L1 -301 7172 6905 7 1614 189 0 0 0 chrX 134963542 134963563 -31686733 + (CA)n Simple_repeat Simple_repeat 2 22 0 7 1614 732 43 0 0 chrX 134965264 134965356 -31684940 + (TA)n Simple_repeat Simple_repeat 1 92 0 7 1614 7648 56 20 3 chrX 134965369 134966383 -31683913 - L1Md_F2 LINE L1 -4 6578 5541 7 1614 570 235 22 111 chrX 134966378 134966603 -31683693 + Lx4B LINE L1 6854 7058 0 7 1614 713 321 6 0 chrX 134966874 134967036 -31683260 + B3A SINE B2 6 168 -30 7 1614 252 0 0 0 chrX 134968660 134968688 -31681608 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1614 772 280 119 63 chrX 134968880 134969258 -31681038 - Lx8 LINE L1 -7 7466 7068 7 1614 444 82 0 0 chrX 134969269 134969330 -31680966 + (TA)n Simple_repeat Simple_repeat 2 62 0 7 1614 2022 135 6 6 chrX 134969866 134970194 -31680102 + Lx3B LINE L1 6645 6972 -1 7 1614 656 254 27 33 chrX 134970466 134970641 -31679655 - B3A SINE B2 0 198 27 7 1614 4858 50 2 0 chrX 134970641 134971239 -31679057 - L1Md_F2 LINE L1 -12 6570 5972 7 1614 4461 45 2 0 chrX 134971246 134971884 -31678412 + L1Md_F2 LINE L1 5330 5968 -614 7 1614 216 189 0 0 chrX 134973647 134973684 -31676612 + (TATG)n Simple_repeat Simple_repeat 2 38 0 7 1614 464 264 125 4 chrX 134973978 134974130 -31676166 + Lx9 LINE L1 6227 6365 -1108 7 1614 530 265 103 142 chrX 134974122 134974509 -31675787 + Lx9 LINE L1 7100 7471 -173 7 1614 414 307 19 13 chrX 134974741 134974896 -31675400 + L2a LINE L2 3266 3421 -5 7 1614 581 93 0 10 chrX 134975756 134975854 -31674442 - L1_Mus2 LINE L1 -1 6565 6469 7 1614 567 273 7 7 chrX 134976477 134976621 -31673675 - B1F SINE Alu -2 147 4 7 1614 22 35 0 0 chrX 134976787 134976816 -31673480 + AT_rich Low_complexity Low_complexity 1 29 0 7 1614 236 232 17 35 chrX 134976982 134977040 -31673256 - RLTR14 LTR ERV1 -29 353 297 7 1614 3212 39 3 0 chrX 134978077 134978467 -31671829 - L1Md_F3 LINE L1 -14 6570 6180 7 1614 558 283 65 13 chrX 134978975 134979129 -31671167 - RSINE1 SINE B4 -1 164 3 7 1614 641 310 31 57 chrX 134979594 134979823 -31670473 - MER58A DNA MER1_type 0 224 2 7 1614 1010 318 51 73 chrX 134979950 134980437 -31669859 - MT2A LTR ERVL -6 509 1 7 1614 39 0 0 0 chrX 134980509 134980548 -31669748 + AT_rich Low_complexity Low_complexity 1 39 0 7 1614 442 290 10 0 chrX 134980598 134980698 -31669598 - B3A SINE B2 -69 129 29 7 1614 838 40 0 0 chrX 134980698 134980798 -31669498 - L1Md_F2 LINE L1 -383 6201 6102 7 1614 1823 75 45 0 chrX 134980798 134981065 -31669231 + L1Md_F2 LINE L1 6301 6579 -3 7 1614 1218 239 112 18 chrX 134981215 134981615 -31668681 + RMER10A LTR ERVL 1 438 -4 7 1614 917 246 116 23 chrX 134984265 134985111 -31665185 + L1MC3 LINE L1 5070 6029 -150 7 1614 344 273 39 26 chrX 134985770 134985924 -31664372 - Lx9 LINE L1 -174 7470 7315 7 1614 450 261 0 84 chrX 134985955 134986110 -31664186 + Lx9 LINE L1 6994 7135 -509 7 1614 333 237 13 13 chrX 134986630 134986707 -31663589 - MTE2b LTR MaLR -20 359 283 7 1614 260 167 227 0 chrX 134986709 134986775 -31663521 - RMER19C LTR ERVK 0 611 531 7 1614 617 117 10 0 chrX 134986856 134986931 -31663365 + (GA)n Simple_repeat Simple_repeat 2 77 0 7 1614 890 103 0 7 chrX 134986931 134987068 -31663228 + (GGAA)n Simple_repeat Simple_repeat 4 139 0 7 1614 617 117 10 0 chrX 134987068 134987095 -31663201 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 1614 700 303 14 36 chrX 134987095 134987314 -31662982 - MTE2b LTR MaLR -163 216 3 7 1614 201 184 41 0 chrX 134990978 134991027 -31659269 + GA-rich Low_complexity Low_complexity 4 54 0 7 1614 28 0 0 0 chrX 134991808 134991836 -31658460 + AT_rich Low_complexity Low_complexity 1 28 0 7 1614 345 158 0 0 chrX 134991837 134991919 -31658377 + CT-rich Low_complexity Low_complexity 1 82 0 7 1614 273 75 0 0 chrX 134991919 134991959 -31658337 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1614 626 311 40 0 chrX 134991973 134992124 -31658172 - B3A SINE B2 -38 160 4 7 1614 3570 59 8 40 chrX 134994262 134994756 -31655540 - L1_Mus2 LINE L1 -4 6562 6085 7 1614 216 0 0 0 chrX 134995290 134995314 -31654982 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 1614 276 77 0 0 chrX 134995423 134995462 -31654834 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1614 360 117 78 0 chrX 134995855 134995932 -31654364 - Lx LINE L1 0 6654 6572 7 1614 1223 34 7 0 chrX 134995970 134996116 -31654180 + B1_Mm SINE Alu 1 147 0 7 1614 30 69 0 0 chrX 134996122 134996180 -31654116 + AT_rich Low_complexity Low_complexity 1 58 0 7 1614 270 357 70 22 chrX 134996468 134996823 -31653473 - L1M4 LINE L1 -5282 1365 994 7 1614 279 278 83 49 chrX 134996826 134997030 -31653266 + L1M4 LINE L1 5657 5867 -311 7 1614 406 328 67 80 chrX 134997377 134997778 -31652518 - L1M4 LINE L1 -6130 412 17 7 1614 27 29 0 0 chrX 134997927 134997961 -31652335 + AT_rich Low_complexity Low_complexity 1 34 0 7 1614 258 81 0 0 chrX 134998142 134998179 -31652117 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1614 547 315 102 15 chrX 134998270 134998534 -31651762 + Lx8 LINE L1 6932 7218 -255 7 1614 928 271 20 70 chrX 134998545 134998890 -31651406 + Lx5 LINE L1 6719 7046 -4 7 1614 327 25 0 0 chrX 135000177 135000217 -31650079 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 1 1614 1046 88 0 0 chrX 135000217 135000354 -31649942 - B1_Mus1 SINE Alu -11 137 1 2 1614 1819 186 21 34 chrX 135001193 135001571 -31648725 - ORR1D1 LTR MaLR 0 374 2 3 1614 287 277 49 11 chrX 135003495 135003627 -31646669 - B4 SINE B4 -146 146 4 4 201 1287 279 63 14 chrX 135003643 135004169 -31646127 - L1MA6 LINE L1 -343 5957 5375 5 1615 1021 283 73 14 chrX 135004336 135004762 -31645534 - L1MA6 LINE L1 -1193 4950 4500 5 1615 270 0 0 0 chrX 135004994 135005024 -31645272 + (A)n Simple_repeat Simple_repeat 1 30 0 6 1615 1333 275 71 14 chrX 135005034 135005470 -31644826 - Lx7 LINE L1 -398 7298 6830 7 1615 3048 59 0 0 chrX 135005454 135005829 -31644467 - L1Md_F2 LINE L1 -331 6251 5877 8 1615 2311 81 3 9 chrX 135005832 135006158 -31644138 + L1Md_F2 LINE L1 6259 6582 0 8 1615 3711 274 39 25 chrX 135006176 135007354 -31642942 - Lx7 LINE L1 -916 6780 5587 7 1615 649 309 80 28 chrX 135007358 135007584 -31642712 - L1MA6 LINE L1 -1636 4507 4261 5 1615 461 32 16 0 chrX 135007584 135007647 -31642649 + (TG)n Simple_repeat Simple_repeat 2 65 0 9 1615 649 309 80 28 chrX 135007647 135007930 -31642366 - L1MA6 LINE L1 -1883 4260 3972 5 1615 250 322 149 34 chrX 135008671 135008819 -31641477 - MIRb SINE MIR -59 209 45 1 1615 248 309 40 20 chrX 135011076 135011175 -31639121 + MTEb LTR MaLR 279 379 0 1 1615 1648 164 21 49 chrX 135011478 135011664 -31638632 - ORR1A4 LTR MaLR -9 320 143 1 1615 4527 59 13 20 chrX 135011664 135012266 -31638030 - L1_Mus2 LINE L1 0 6566 5969 1 1615 1648 164 21 49 chrX 135012266 135012406 -31637890 - ORR1A4 LTR MaLR -187 142 3 1 1615 24 32 0 0 chrX 135012659 135012690 -31637606 + AT_rich Low_complexity Low_complexity 1 31 0 1 1615 181 297 0 98 chrX 135012777 135012859 -31637437 - MER5A DNA MER1_type -24 165 92 1 1615 813 322 44 61 chrX 135013017 135013314 -31636982 - MLT1J1 LTR MaLR -146 298 7 1 1615 453 377 13 19 chrX 135013349 135013506 -31636790 + MER45A DNA Tip100 19 174 -4 1 1615 1022 328 126 37 chrX 135013628 135014201 -31636095 + L3 LINE CR1 3531 4154 -335 1 1615 276 30 0 0 chrX 135014369 135014402 -31635894 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 1615 527 299 65 97 chrX 135014538 135014786 -31635510 + MIR SINE MIR 23 262 0 2 1615 198 278 68 14 chrX 135015084 135015157 -31635139 - MIRc SINE MIR -62 206 130 2 1615 455 335 58 21 chrX 135015815 135016056 -31634240 - MIR SINE MIR -8 254 5 2 1615 393 22 0 0 chrX 135016543 135016589 -31633707 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1615 255 329 86 58 chrX 135017625 135017799 -31632497 + MIR SINE MIR 13 191 -71 2 1615 248 294 37 56 chrX 135017822 135017930 -31632366 + MIRc SINE MIR 41 146 -122 2 1615 329 0 24 0 chrX 135017931 135017972 -31632324 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 2 1615 318 301 0 24 chrX 135018002 135018087 -31632209 - PB1D10 SINE Alu 0 117 35 2 1615 498 306 113 5 chrX 135019356 135019550 -31630746 + ID_B1 SINE B4 2 216 -8 2 1615 1081 277 102 27 chrX 135019765 135020099 -31630197 - MTE2b LTR MaLR -16 363 5 2 1615 1643 195 189 91 chrX 135020201 135020453 -31629843 + RMER6D LTR ERVK 1 358 -362 3 1615 297 140 0 0 chrX 135020453 135020510 -31629786 + (CAGTT)n Simple_repeat Simple_repeat 4 60 0 3 1615 1643 195 189 91 chrX 135020510 135020907 -31629389 + RMER6D LTR ERVK 359 714 -6 3 1615 330 343 73 0 chrX 135021076 135021213 -31629083 - B1F1 SINE Alu -2 147 1 3 1615 439 332 50 25 chrX 135021283 135021484 -31628812 + MIR SINE MIR 1 206 -56 3 1615 189 319 131 49 chrX 135021534 135021656 -31628640 + MIRc SINE MIR 13 144 -124 3 1615 1619 124 14 71 chrX 135023034 135023328 -31626968 - ORR1A4 LTR MaLR -52 277 1 3 1615 2699 160 20 141 chrX 135023318 135023972 -31626324 - ORR1A4-int LTR MaLR 0 1963 1389 3 1615 3508 84 6 16 chrX 135023987 135024493 -31625803 + Lx3_Mus LINE L1 4855 5355 -531 3 1615 4087 70 28 4 chrX 135024491 135025034 -31625262 + L1Md_F2 LINE L1 6004 6559 -23 3 1615 4209 70 4 3 chrX 135025074 135025866 -31624430 + Lx3_Mus LINE L1 5359 6147 -862 3 1615 4904 86 11 16 chrX 135025866 135026567 -31623729 + Lx3_Mus LINE L1 6311 7008 -1 3 1615 1072 294 45 25 chrX 135026580 135026978 -31623318 + Lx9 LINE L1 6544 6949 -695 3 1615 1721 149 66 0 chrX 135026978 135027279 -31623017 + ORR1A4 LTR MaLR 1 321 -8 3 1615 1917 149 37 93 chrX 135027284 135027690 -31622606 + ORR1A4-int LTR MaLR 1 383 -1580 3 1615 260 141 104 45 chrX 135027690 135027722 -31622574 + RMER17A2 LTR ERVK 1 36 -870 4 1615 2688 48 0 0 chrX 135027722 135028054 -31622242 - IAPEY3_LTR LTR ERVK 0 332 1 4 1615 4278 149 27 92 chrX 135028054 135028997 -31621299 + RMER17A2 LTR ERVK 22 902 -4 4 1615 1874 198 39 59 chrX 135028993 135029454 -31620842 + ORR1A4-int LTR MaLR 370 821 -1142 3 1615 285 200 61 15 chrX 135029398 135029464 -31620832 + RLTR25B LTR ERVK 442 510 -518 4 1615 1441 192 44 0 chrX 135029461 135029805 -31620491 + ORR1A4-int LTR MaLR 718 1050 -913 3 1615 285 0 0 62 chrX 135030033 135030081 -31620215 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 4 1615 9157 82 10 1 chrX 135030740 135032773 -31617523 + L1_Mus1 LINE L1 4511 6566 -1 4 1615 24 53 0 0 chrX 135032776 135032814 -31617482 + AT_rich Low_complexity Low_complexity 1 38 0 4 1615 310 325 60 60 chrX 135032954 135033045 -31617251 + MER20 DNA MER1_type 86 183 -36 4 1615 1080 193 61 0 chrX 135033045 135033257 -31617039 - URR1B DNA MER1_type 0 225 1 4 1615 310 325 60 60 chrX 135033257 135033299 -31616997 + MER20 DNA MER1_type 184 219 0 4 1615 1894 203 8 8 chrX 135034134 135034512 -31615784 - ORR1C1 LTR MaLR 0 378 1 4 1615 357 154 34 17 chrX 135035568 135035602 -31614694 + polypurine Low_complexity Low_complexity 2 35 0 5 1615 324 0 0 0 chrX 135035602 135035638 -31614658 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1615 357 154 34 17 chrX 135035638 135035722 -31614574 + GA-rich Low_complexity Low_complexity 36 121 0 5 1615 301 25 50 0 chrX 135035722 135035762 -31614534 + (GGGGA)n Simple_repeat Simple_repeat 5 46 0 5 1615 949 144 11 0 chrX 135035762 135035936 -31614360 + GA-rich Low_complexity Low_complexity 1 176 0 5 1615 686 175 91 10 chrX 135037009 135037217 -31613079 - Lx9 LINE L1 -1 7643 7419 5 1615 355 209 19 0 chrX 135037295 135037400 -31612896 + (TA)n Simple_repeat Simple_repeat 2 108 0 5 1615 21 82 0 0 chrX 135037441 135037490 -31612806 + AT_rich Low_complexity Low_complexity 1 49 0 5 1615 1044 64 29 0 chrX 135038249 135038389 -31611907 - B1_Mus2 SINE Alu -3 144 1 5 1615 360 0 0 0 chrX 135040162 135040202 -31610094 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1615 2215 75 0 7 chrX 135042444 135042741 -31607555 - L1Md_F2 LINE L1 -12 6570 6276 6 1615 1966 54 0 0 chrX 135042741 135042982 -31607314 + L1Md_F2 LINE L1 6039 6279 -303 6 1615 4300 18 4 0 chrX 135043364 135043855 -31606441 + MT2_Mm LTR ERVL 1 493 0 6 1615 40591 16 14 0 chrX 135043855 135049146 -31601150 + MERVL-int LTR ERVL 1 5364 -121 6 1615 373 132 12 50 chrX 135049146 135049226 -31601070 + ORR1A3-int LTR MaLR 564 640 -1323 6 1615 314 0 0 0 chrX 135049226 135049264 -31601032 + MERVL-int LTR ERVL 5448 5485 0 6 1615 4300 18 4 0 chrX 135049264 135049755 -31600541 + MT2_Mm LTR ERVL 1 493 0 6 1615 576 144 47 19 chrX 135050305 135050411 -31599885 + B1_Mus1 SINE Alu 40 148 0 6 1615 217 405 71 0 chrX 135050645 135050771 -31599525 - L2b LINE L2 -17 3358 3224 6 1615 699 329 57 30 chrX 135051000 135051263 -31599033 + B4A SINE B4 17 286 -6 6 1615 230 81 27 0 chrX 135051625 135051662 -31598634 + (ATG)n Simple_repeat Simple_repeat 2 39 0 6 1615 1426 75 0 11 chrX 135051791 135051979 -31598317 - B2_Mm1a SINE B2 -7 186 1 6 1615 246 312 138 0 chrX 135051983 135052063 -31598233 - B1F SINE Alu -44 105 15 6 1615 253 191 33 0 chrX 135053128 135053213 -31597083 + L1M LINE L1 5341 5427 -757 6 1615 195 42 0 0 chrX 135054146 135054170 -31596126 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 7 1615 21 0 0 0 chrX 135054608 135054629 -31595667 + AT_rich Low_complexity Low_complexity 1 21 0 7 1615 1129 259 97 14 chrX 135054958 135055248 -31595048 + ORR1D2 LTR MaLR 54 367 -3 7 1615 470 50 0 0 chrX 135055325 135055385 -31594911 - L1Md_F2 LINE L1 -72 5811 5752 7 1615 6085 53 3 1 chrX 135055385 135056147 -31594149 + L1Md_F2 LINE L1 5808 6570 -12 7 1615 246 293 37 0 chrX 135056155 135056237 -31594059 + L1M LINE L1 5603 5687 -625 6 1615 467 315 134 3 chrX 135059225 135059531 -31590765 + L1M3 LINE L1 2258 2603 -3537 7 1615 240 358 34 101 chrX 135059559 135059631 -31590665 - ID_B1 SINE B4 -84 140 2 7 1615 283 312 13 0 chrX 135059631 135059708 -31590588 - ID4 SINE ID -4 79 2 7 1615 531 31 0 0 chrX 135059999 135060064 -31590232 + (CA)n Simple_repeat Simple_repeat 2 66 0 7 1615 408 20 0 0 chrX 135060064 135060112 -31590184 + (GA)n Simple_repeat Simple_repeat 2 50 0 7 1615 941 242 50 58 chrX 135060116 135060498 -31589798 + L1M3 LINE L1 2617 2995 -3145 7 1615 300 318 158 32 chrX 135060665 135060912 -31589384 + L1MD LINE L1 2966 3243 -2903 7 1615 257 239 42 69 chrX 135060941 135061013 -31589283 + BC1_Mm scRNA scRNA 14 83 -69 8 1615 186 43 0 0 chrX 135061018 135061041 -31589255 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 8 1615 2103 274 98 26 chrX 135061121 135062168 -31588128 + L1M3 LINE L1 3370 4492 -1648 7 1615 627 292 7 0 chrX 135062179 135062323 -31587973 + B3 SINE B2 58 202 -14 8 1615 340 246 75 27 chrX 135062326 135062472 -31587824 + L1M3 LINE L1 4478 4630 -1510 7 1615 863 345 49 47 chrX 135062541 135062906 -31587390 + MT2A LTR ERVL 89 454 -79 8 1615 348 24 0 0 chrX 135062920 135062961 -31587335 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 1615 4412 175 28 9 chrX 135062976 135063819 -31586477 - Lx7 LINE L1 -1643 6053 5194 8 1615 276 100 0 0 chrX 135063819 135063859 -31586437 + (TA)n Simple_repeat Simple_repeat 2 41 0 8 1615 4412 166 29 7 chrX 135063859 135064006 -31586290 - Lx7 LINE L1 -687 5193 5037 8 1615 362 325 73 61 chrX 135064770 135064934 -31585362 + ID_B1 SINE B4 3 168 -56 8 1615 3665 73 4 0 chrX 135065021 135065497 -31584799 + L1_Mus1 LINE L1 6086 6563 -4 8 1615 21 57 0 0 chrX 135065497 135065532 -31584764 + AT_rich Low_complexity Low_complexity 1 35 0 8 1615 1046 281 21 114 chrX 135065751 135066124 -31584172 + RMER15 LTR ERVL 127 464 -111 9 1615 302 67 22 0 chrX 135066124 135066169 -31584127 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 1615 241 333 86 25 chrX 135066225 135066388 -31583908 - L3 LINE CR1 -64 4425 4253 9 1615 481 267 25 16 chrX 135066650 135066772 -31583524 - L3 LINE CR1 -567 3922 3800 9 1615 31 44 0 0 chrX 135068641 135068686 -31581610 + AT_rich Low_complexity Low_complexity 1 45 0 9 1615 211 331 52 11 chrX 135069338 135069456 -31580840 - L2a LINE L2 -6 3420 3241 9 1615 190 407 42 83 chrX 135069591 135069808 -31580488 - L2a LINE L2 -270 3117 2910 9 1615 386 209 0 21 chrX 135069867 135069960 -31580336 - L1MC4a LINE L1 -1 7881 7791 9 1615 278 385 42 0 chrX 135070515 135070658 -31579638 - MLT1H1 LTR MaLR -371 184 36 9 1615 354 374 6 37 chrX 135071479 135071502 -31578794 + ID_B1 SINE B4 67 222 -2 9 1615 450 348 22 0 chrX 135071502 135071640 -31578656 + B1F2 SINE Alu 7 147 -2 9 1615 347 224 189 22 chrX 135071795 135071975 -31578321 + Lx9 LINE L1 7399 7608 -36 9 1615 213 39 0 0 chrX 135071975 135072001 -31578295 + (TTATA)n Simple_repeat Simple_repeat 1 26 0 1 1615 607 276 12 0 chrX 135072042 135072212 -31578084 - Lx6 LINE L1 -33 7427 7256 1 1615 264 347 27 0 chrX 135072536 135072611 -31577685 + PB1D10 SINE Alu 1 77 -40 1 1615 548 306 12 18 chrX 135072805 135072968 -31577328 - B4A SINE B4 -128 164 3 1 1615 335 247 13 0 chrX 135073254 135073331 -31576965 - ID4_ SINE ID -1 82 5 1 1615 503 287 43 70 chrX 135074002 135074189 -31576107 - L2a LINE L2 0 3426 3245 1 1615 941 276 21 0 chrX 135074762 135075005 -31575291 - Lx8 LINE L1 -561 6912 6665 1 1615 5930 126 30 1 chrX 135075293 135076186 -31574110 - Lx LINE L1 -17 6637 5719 1 1615 4037 77 35 0 chrX 135076181 135076491 -31573805 + MusHAL1 LINE L1 1535 1849 -863 1 1615 207 69 0 0 chrX 135076491 135076520 -31573776 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 1615 4037 77 35 0 chrX 135076520 135076809 -31573487 + MusHAL1 LINE L1 1850 2153 -559 1 1615 243 0 0 0 chrX 135076865 135076892 -31573404 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 1 1615 1369 329 22 11 chrX 135076910 135077451 -31572845 - Lx7 LINE L1 -376 7320 6774 1 1615 2508 135 130 37 chrX 135077561 135078075 -31572221 - Lx4B LINE L1 -103 5774 5213 1 1615 302 157 0 0 chrX 135078048 135078099 -31572197 - L1_Mur2 LINE L1 -2345 3535 3485 1 1615 6226 134 91 11 chrX 135078094 135079151 -31571145 + Lx4B LINE L1 5745 6885 -173 1 1615 1172 283 56 39 chrX 135079151 135079511 -31570785 - MTD LTR MaLR -53 366 1 1 1615 1888 233 191 8 chrX 135079512 135080165 -31570131 - L1_Mur3 LINE L1 -46 5834 5062 1 1615 495 286 34 0 chrX 135080178 135080325 -31569971 - L1_Mur3 LINE L1 -3649 2231 2080 1 1615 3213 253 37 18 chrX 135080333 135081560 -31568736 - L1_Mur3 LINE L1 -3712 2168 913 1 1615 222 192 0 0 chrX 135082655 135082707 -31567589 + (TATATG)n Simple_repeat Simple_repeat 6 57 0 1 1615 580 309 213 20 chrX 135082836 135083245 -31567051 + MLT1D LTR MaLR 12 499 -6 1 1615 358 259 37 0 chrX 135083651 135083732 -31566564 + PB1D10 SINE Alu 22 105 -12 1 1615 326 358 83 87 chrX 135083933 135084187 -31566109 - MamSINE1 SINE tRNA 0 290 38 1 1615 673 230 57 32 chrX 135084224 135084471 -31565825 + Lx9 LINE L1 7391 7643 -1 1 1615 34 65 0 0 chrX 135084601 135084663 -31565633 + AT_rich Low_complexity Low_complexity 1 62 0 1 1615 414 0 0 0 chrX 135087793 135087839 -31562457 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 1615 238 154 62 0 chrX 135088355 135088420 -31561876 + T-rich Low_complexity Low_complexity 2 70 0 1 1615 440 87 29 0 chrX 135088667 135088736 -31561560 + (TATATG)n Simple_repeat Simple_repeat 4 74 0 1 1615 859 243 29 143 chrX 135089166 135089473 -31560823 - MTE2b LTR MaLR -107 272 1 1 1615 670 285 0 46 chrX 135089678 135089851 -31560445 + B3A SINE B2 34 198 0 1 1615 843 161 23 0 chrX 135089874 135090048 -31560248 + GA-rich Low_complexity Low_complexity 1 178 0 1 1615 201 178 0 22 chrX 135090171 135090217 -31560079 + T-rich Low_complexity Low_complexity 4 48 0 1 1615 261 235 132 38 chrX 135090229 135090335 -31559961 - MER110A LTR ERV1 -90 378 263 1 1615 1837 163 31 31 chrX 135091041 135091396 -31558900 + ORR1B1 LTR MaLR 38 392 -2 1 1615 6115 68 18 26 chrX 135091536 135092380 -31557916 + L1Md_F2 LINE L1 5741 6577 -5 1 1615 501 261 0 126 chrX 135092674 135092880 -31557416 + B3A SINE B2 3 182 -16 1 1615 697 272 19 6 chrX 135093181 135093340 -31556956 + RSINE1 SINE B4 3 163 -2 1 1615 232 258 32 0 chrX 135094638 135094700 -31555596 - MER5B DNA MER1_type -1 177 114 1 1615 272 363 0 19 chrX 135094919 135095023 -31555273 - MER5B DNA MER1_type -57 121 20 1 1615 231 253 34 0 chrX 135095475 135095544 -31554752 + MIRm SINE MIR 72 153 -123 1 1615 183 333 0 32 chrX 135096674 135096736 -31553560 + L4 LINE RTE 1587 1646 -383 1 1615 226 246 0 0 chrX 135096892 135096949 -31553347 + T-rich Low_complexity Low_complexity 3 59 0 1 1615 2466 134 142 30 chrX 135097815 135098309 -31551987 - Lx2 LINE L1 0 6997 6449 1 1615 311 0 26 0 chrX 135099055 135099094 -31551202 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 1615 243 0 0 0 chrX 135099094 135099120 -31551176 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1615 204 129 86 0 chrX 135099124 135099194 -31551102 + (TATAA)n Simple_repeat Simple_repeat 4 79 0 1 1615 428 294 0 40 chrX 135100299 135100451 -31549845 - MIRc SINE MIR 0 268 123 1 1615 245 321 59 7 chrX 135101072 135101207 -31549089 - L1MC4a LINE L1 -462 7580 7439 1 1615 665 238 136 11 chrX 135101194 135101458 -31548838 - L1MB3 LINE L1 -204 5979 5683 1 1615 21 0 0 0 chrX 135101509 135101530 -31548766 + AT_rich Low_complexity Low_complexity 1 21 0 1 1615 2554 246 91 8 chrX 135101530 135102115 -31548181 - Lx5 LINE L1 -17 7033 6401 1 1615 216 0 0 0 chrX 135102123 135102147 -31548149 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 1615 420 274 61 6 chrX 135102162 135102357 -31547939 - L1MB3 LINE L1 -735 5436 5232 1 1615 696 236 77 4 chrX 135102410 135102657 -31547639 - L1MB3 LINE L1 -1489 4651 4387 1 1615 445 319 39 10 chrX 135102755 135102958 -31547338 - L1ME3 LINE L1 -61 6101 5893 1 1615 327 312 66 36 chrX 135103599 135103765 -31546531 - L1MC4a LINE L1 -896 6986 6816 1 1615 3658 137 2 23 chrX 135104033 135104048 -31546248 - Lx LINE L1 -17 6637 6624 1 1615 350 0 0 43 chrX 135104048 135104095 -31546201 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 1 1615 3658 137 2 23 chrX 135104095 135104683 -31545613 - Lx LINE L1 -31 6623 6047 1 1615 4888 146 53 33 chrX 135104683 135105112 -31545184 - L1_Mm LINE L1 -84 5799 5356 1 1615 432 0 0 0 chrX 135105112 135105160 -31545136 + (GTTTG)n Simple_repeat Simple_repeat 2 49 0 1 1615 1115 80 0 0 chrX 135105160 135105298 -31544998 - B1_Mus2 SINE Alu -9 138 1 1 1615 4888 146 53 33 chrX 135105298 135105786 -31544510 - L1_Mm LINE L1 -528 5355 4863 1 1615 1705 62 0 0 chrX 135105808 135106017 -31544279 + L1_Mus2 LINE L1 6090 6298 -268 1 1615 7272 86 8 12 chrX 135106023 135106181 -31544115 - RLTR13D5 LTR ERVK -7 1016 858 1 1615 2543 44 0 6 chrX 135106181 135106503 -31543793 + L1Md_F3 LINE L1 6265 6584 0 1 1615 7272 86 8 12 chrX 135106503 135107364 -31542932 - RLTR13D5 LTR ERVK -166 857 3 1 1615 2164 60 0 0 chrX 135107364 135107633 -31542663 + L1_Mus2 LINE L1 6292 6560 -6 1 1615 2475 162 8 17 chrX 135107667 135108139 -31542157 - L1_Mm LINE L1 -1007 4876 4409 1 1615 9102 159 3 38 chrX 135108135 135109914 -31540382 + L1_Mur1 LINE L1 2710 4426 -1460 1 1615 210 204 0 20 chrX 135110010 135110060 -31540236 + T-rich Low_complexity Low_complexity 3 51 0 1 1615 289 310 0 0 chrX 135110114 135110185 -31540111 - RSINE1 SINE B4 -91 74 4 1 1615 24 0 0 0 chrX 135110242 135110266 -31540030 + AT_rich Low_complexity Low_complexity 1 24 0 1 1615 712 232 0 7 chrX 135110293 135110432 -31539864 + B1_Mus1 SINE Alu 2 139 -9 1 1615 279 0 0 0 chrX 135110432 135110463 -31539833 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1615 258 274 62 10 chrX 135110778 135110874 -31539422 - L1MD2 LINE L1 -185 6174 6074 1 1615 710 333 44 11 chrX 135111057 135111320 -31538976 - B4A SINE B4 -16 276 2 1 1615 26 64 0 0 chrX 135111346 135111393 -31538903 + AT_rich Low_complexity Low_complexity 1 47 0 1 1615 392 37 19 0 chrX 135111483 135111537 -31538759 + (TAA)n Simple_repeat Simple_repeat 1 55 0 1 1615 843 39 0 0 chrX 135111538 135111641 -31538655 + (GAA)n Simple_repeat Simple_repeat 3 105 0 1 1615 404 219 66 30 chrX 135111641 135111811 -31538485 - Lx7 LINE L1 -176 7520 7349 1 1615 883 108 64 7 chrX 135111811 135111951 -31538345 + B1_Mus1 SINE Alu 1 148 0 1 1615 404 219 66 30 chrX 135111951 135111978 -31538318 - Lx7 LINE L1 -348 7348 7317 1 1615 310 154 67 9 chrX 135111991 135112096 -31538200 - Lx7 LINE L1 -284 7412 7302 1 1615 1164 90 33 22 chrX 135112096 135112277 -31538019 - MTA_Mm LTR MaLR 0 396 214 1 1615 247 250 16 0 chrX 135112277 135112341 -31537955 - L1_Mur3 LINE L1 -1160 4720 4656 1 1615 243 103 0 0 chrX 135112361 135112400 -31537896 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1615 433 296 52 36 chrX 135112405 135112598 -31537698 + MER63C DNA AcHobo 92 287 -643 1 1615 331 344 17 94 chrX 135112569 135112749 -31537547 + MER63A DNA AcHobo 34 199 -11 1 1615 244 333 71 0 chrX 135112787 135112913 -31537383 - L1MC LINE L1 -2343 5539 5405 1 1615 1530 199 78 62 chrX 135113131 135113554 -31536742 - RMER16 LTR ERVK 0 533 104 1 1615 14670 106 29 26 chrX 135113584 135114586 -31535710 - RMER16-int LTR ERVK 0 5406 4412 1 1615 2506 29 10 3 chrX 135114586 135114896 -31535400 + L1Md_F2 LINE L1 6270 6581 -1 1 1615 14670 106 29 26 chrX 135114896 135116194 -31534102 - RMER16-int LTR ERVK -995 4411 3101 1 1615 34023 97 29 29 chrX 135116195 135119799 -31530497 + ETnERV3-int LTR ERVK 415 3976 -1832 1 1615 234 0 0 0 chrX 135119799 135119825 -31530471 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 1 1615 34023 97 29 29 chrX 135119825 135121583 -31528713 + ETnERV3-int LTR ERVK 3977 5779 -29 1 1615 5229 81 7 102 chrX 135121597 135122465 -31527831 + RLTR13B1 LTR ERVK 1 785 -108 1 1615 189 0 0 0 chrX 135122465 135122486 -31527810 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 1615 6187 104 20 9 chrX 135122491 135122929 -31527367 - RMER16-int LTR ERVK -2291 3115 2678 1 1615 4413 136 41 99 chrX 135122929 135123887 -31526409 - RLTR13D6 LTR ERVK 0 902 1 1 1615 6187 104 20 9 chrX 135123887 135124351 -31525945 - RMER16-int LTR ERVK -2729 2677 2203 1 1615 3208 144 72 66 chrX 135124353 135124990 -31525306 - RLTR26 LTR ERVK 0 642 2 1 1615 5998 116 10 17 chrX 135124990 135125120 -31525176 - RMER16-int LTR ERVK -3212 2194 2067 1 1615 3337 188 54 11 chrX 135125120 135125783 -31524513 - RLTR17 LTR ERVK 0 692 1 1 1615 5998 116 10 17 chrX 135125783 135126592 -31523704 - RMER16-int LTR ERVK -3340 2066 1262 1 1615 500 210 73 95 chrX 135126592 135126771 -31523525 - RMER16 LTR ERVK -358 175 1 1 1615 266 343 125 36 chrX 135126972 135127332 -31522964 + L2b LINE L2 2929 3321 -105 1 1615 960 152 49 95 chrX 135127504 135127749 -31522547 + ORR1B1 LTR MaLR 1 253 -141 1 1615 1013 282 157 22 chrX 135127753 135128251 -31522045 - L1M2 LINE L1 -1043 5100 4554 1 1615 1005 290 105 23 chrX 135128251 135128593 -31521703 + ORR1D2 LTR MaLR 1 370 0 1 1615 1013 282 157 22 chrX 135128593 135128787 -31521509 - L1M2 LINE L1 -1590 4553 4314 1 1615 464 290 52 5 chrX 135128817 135129011 -31521285 + L1M2 LINE L1 5153 5355 -788 1 1615 3459 160 34 67 chrX 135129101 135130033 -31520263 - RLTR13D6 LTR ERVK -95 888 2 1 1615 183 42 0 0 chrX 135130033 135130057 -31520239 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 1615 21 57 0 0 chrX 135130096 135130131 -31520165 + AT_rich Low_complexity Low_complexity 1 35 0 1 1615 23 0 0 0 chrX 135131421 135131444 -31518852 + AT_rich Low_complexity Low_complexity 1 23 0 1 1615 903 282 68 42 chrX 135131655 135131962 -31518334 - ORR1D2 LTR MaLR -53 317 3 1 1615 393 22 0 0 chrX 135132094 135132140 -31518156 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1615 381 255 38 0 chrX 135132165 135132271 -31518025 + Lx2B LINE L1 6879 6988 -12 1 1615 558 175 12 146 chrX 135133052 135133306 -31516990 - Lx9 LINE L1 -18 7626 7407 1 1615 884 240 6 0 chrX 135133302 135133485 -31516811 + Lx9 LINE L1 7209 7392 -252 1 1615 2454 212 25 14 chrX 135133987 135134475 -31515821 - RMER15 LTR ERVL -20 555 63 1 1615 378 159 0 0 chrX 135134476 135134545 -31515751 + CT-rich Low_complexity Low_complexity 2 70 0 1 1615 510 139 0 0 chrX 135134560 135134639 -31515657 + MERVL_2A-int LTR ERVL 5683 5761 0 2 1615 299 196 0 0 chrX 135134641 135134697 -31515599 + MT2A LTR ERVL 3 58 -475 2 1615 247 258 165 41 chrX 135134811 135134908 -31515388 + B4 SINE B4 53 161 -131 2 1616 348 152 0 0 chrX 135135308 135135374 -31514922 + (TTA)n Simple_repeat Simple_repeat 2 67 0 2 1616 8864 120 17 15 chrX 135135377 135137079 -31513217 - Lx3B LINE L1 -3 6970 5284 2 1616 278 26 0 25 chrX 135137079 135137119 -31513177 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 2 1616 4889 108 25 3 chrX 135137119 135137238 -31513058 - Lx3B LINE L1 -603 5283 5148 2 1616 4065 159 26 7 chrX 135137559 135138238 -31512058 - RLTR17 LTR ERVK 0 692 1 2 1616 434 281 156 72 chrX 135138361 135138541 -31511755 - B3A SINE B2 -2 196 2 2 1616 441 0 0 0 chrX 135139227 135139276 -31511020 + (T)n Simple_repeat Simple_repeat 1 49 0 2 1616 3452 20 5 0 chrX 135139390 135139783 -31510513 - MTA_Mm LTR MaLR 0 396 2 2 1616 486 274 45 61 chrX 135139859 135140057 -31510239 - B3A SINE B2 -3 195 1 2 1616 702 301 5 40 chrX 135140607 135140829 -31509467 + ID_B1 SINE B4 2 215 -9 2 1616 365 265 62 97 chrX 135141256 135141566 -31508730 - MTE2b LTR MaLR -15 404 7 2 1616 652 317 8 47 chrX 135141620 135141855 -31508441 + MLT1J1 LTR MaLR 49 274 -170 2 1616 499 263 75 38 chrX 135142235 135142448 -31507848 - Lx8 LINE L1 0 7473 7253 2 1616 456 51 0 0 chrX 135142763 135142822 -31507474 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1616 1164 271 73 92 chrX 135142851 135143351 -31506945 - MT2A LTR ERVL -31 553 1 2 1616 23 33 0 0 chrX 135145409 135145439 -31504857 + AT_rich Low_complexity Low_complexity 1 30 0 2 1616 270 0 0 0 chrX 135146717 135146747 -31503549 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1616 360 0 0 0 chrX 135147226 135147266 -31503030 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 2 1616 825 241 23 6 chrX 135147521 135147696 -31502600 + MTE2b LTR MaLR 1 178 -201 2 1616 933 87 0 0 chrX 135147700 135147827 -31502469 + B1_Mus1 SINE Alu 1 127 -21 2 1616 683 266 43 10 chrX 135147830 135148039 -31502257 + MTE2b LTR MaLR 164 379 0 2 1616 21 36 0 0 chrX 135148450 135148478 -31501818 + AT_rich Low_complexity Low_complexity 1 28 0 2 1616 222 345 52 0 chrX 135148911 135148969 -31501327 + MamSINE1 SINE tRNA 8 68 -222 2 1616 263 26 51 0 chrX 135149093 135149132 -31501164 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 2 1616 566 337 54 12 chrX 135149227 135149485 -31500811 - Lx9 LINE L1 -255 7389 7121 2 1616 3645 141 106 71 chrX 135149494 135150258 -31500038 + RMER21B LTR ERV1 52 842 0 2 1616 374 179 77 0 chrX 135150505 135150583 -31499713 + MTC LTR MaLR 330 413 -8 2 1616 2001 214 99 13 chrX 135150638 135151102 -31499194 - Lx5 LINE L1 0 7050 6547 2 1616 1592 192 8 36 chrX 135151137 135151494 -31498802 - Lx4B LINE L1 -691 6367 6021 2 1616 299 232 29 0 chrX 135151631 135151714 -31498582 - L1MA8 LINE L1 -357 5934 5850 2 1616 352 318 79 50 chrX 135151758 135151897 -31498399 + B1F SINE Alu 6 148 -1 2 1616 808 84 0 0 chrX 135152087 135152194 -31498102 - L1_Mus3 LINE L1 -543 6095 5989 2 1616 3969 75 6 0 chrX 135152195 135152727 -31497569 + L1_Mus3 LINE L1 6088 6622 -16 2 1616 198 333 32 0 chrX 135153118 135153181 -31497115 - L2c LINE L2 -8 3379 3315 2 1616 302 328 92 0 chrX 135153431 135153550 -31496746 - MIR SINE MIR -123 139 10 2 1616 25 0 0 0 chrX 135153749 135153774 -31496522 + AT_rich Low_complexity Low_complexity 1 25 0 2 1616 285 378 59 5 chrX 135153777 135153963 -31496333 - MIRb SINE MIR -69 199 4 2 1616 410 328 142 49 chrX 135154065 135154389 -31495907 - MLT1A0 LTR MaLR -2 363 10 2 1616 8101 139 23 6 chrX 135155162 135156627 -31493669 + Lx LINE L1 4428 5920 -734 2 1616 2542 127 7 26 chrX 135156628 135157057 -31493239 + Lx LINE L1 6231 6651 -3 2 1616 335 231 185 17 chrX 135157062 135157181 -31493115 + L1M2 LINE L1 5487 5625 -675 2 1616 7534 58 4 0 chrX 135157731 135158672 -31491624 - L1_Mus1 LINE L1 0 6567 5623 2 1616 6359 107 1 10 chrX 135158670 135159594 -31490702 + L1_Mus1 LINE L1 4714 5629 -254 2 1616 36 40 0 0 chrX 135160555 135160605 -31489691 + AT_rich Low_complexity Low_complexity 1 50 0 2 1616 513 96 10 21 chrX 135161824 135161920 -31488376 + (TTTC)n Simple_repeat Simple_repeat 3 97 0 2 1616 931 128 0 0 chrX 135161989 135162130 -31488166 + B1_Mus1 SINE Alu 1 141 -7 2 1616 528 93 0 0 chrX 135162133 135162208 -31488088 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 2 1616 706 303 75 48 chrX 135162424 135162861 -31487435 + L1VL4 LINE L1 158 606 -5696 2 1616 2883 55 3 0 chrX 135162861 135163225 -31487071 + L1Md_F3 LINE L1 6219 6583 -1 2 1616 10928 109 12 10 chrX 135163234 135164870 -31485426 + L1_Mm LINE L1 4144 5782 -101 2 1616 18536 21 0 1 chrX 135164876 135167735 -31482561 - L1Md_T LINE L1 -2 6580 3724 2 1616 5745 97 19 35 chrX 135167733 135168612 -31481684 + L1_Mus3 LINE L1 5771 6635 -3 2 1616 343 305 69 28 chrX 135169857 135170002 -31480294 + MLT1I LTR MaLR 5 155 -256 2 1616 22 35 0 0 chrX 135171520 135171549 -31478747 + AT_rich Low_complexity Low_complexity 1 29 0 2 1616 1487 164 0 0 chrX 135171631 135171856 -31478440 + URR1B DNA MER1_type 1 225 0 2 1616 1838 317 55 32 chrX 135171856 135172819 -31477477 + Lx9 LINE L1 6469 7444 -200 2 1616 567 40 0 0 chrX 135172819 135172893 -31477403 + (TG)n Simple_repeat Simple_repeat 2 75 0 2 1616 1838 317 55 32 chrX 135172893 135173036 -31477260 + Lx9 LINE L1 7445 7600 -44 2 1616 468 266 178 7 chrX 135173082 135173228 -31477068 - MTD LTR MaLR -42 377 223 2 1616 1531 279 64 28 chrX 135173745 135174324 -31475972 + Lx8 LINE L1 6844 7443 -30 2 1616 411 171 0 0 chrX 135174392 135174468 -31475828 + (TA)n Simple_repeat Simple_repeat 2 77 0 2 1616 203 229 20 20 chrX 135174616 135174665 -31475631 - L2 LINE L2 -1388 2031 1983 2 1616 31 26 0 0 chrX 135175022 135175060 -31475236 + AT_rich Low_complexity Low_complexity 1 38 0 2 1616 4295 59 5 33 chrX 135175589 135176167 -31474129 - L1_Mus2 LINE L1 -1 6565 6004 2 1616 706 305 70 3 chrX 135176443 135176742 -31473554 + MER44A DNA MER2_type 18 336 -3 2 1616 480 303 53 0 chrX 135176804 135176936 -31473360 - ID_B1 SINE B4 -7 217 79 2 1616 32927 82 9 4 chrX 135177019 135183127 -31467169 - L1Md_F2 LINE L1 0 6582 452 2 1616 26 64 0 0 chrX 135184209 135184256 -31466040 + AT_rich Low_complexity Low_complexity 1 47 0 2 1616 31755 66 8 5 chrX 135186141 135191186 -31459110 + L1Md_F2 LINE L1 523 5585 -298 2 1616 8343 34 0 0 chrX 135191187 135192169 -31458127 + L1Md_F2 LINE L1 5587 6568 -14 2 1616 4281 162 12 28 chrX 135193926 135194746 -31455550 + L1VL2 LINE L1 65 871 -5464 2 1616 1440 211 81 6 chrX 135194737 135195094 -31455202 - L1VL2 LINE L1 -5862 473 90 2 1616 584 257 118 12 chrX 135195171 135195362 -31454934 - MTD LTR MaLR -13 406 196 2 1616 1856 206 56 58 chrX 135195388 135195817 -31454479 - RLTR41 LTR ERV1 -18 428 1 2 1616 772 258 45 6 chrX 135195817 135195996 -31454300 - MTD LTR MaLR -231 188 3 2 1616 6814 101 25 2 chrX 135196188 135197525 -31452771 - L1_Mus3 LINE L1 -5 6633 5266 2 1616 2854 135 13 38 chrX 135197522 135198076 -31452220 - L1_Mus3 LINE L1 -2090 3793 3254 2 1616 39443 9 0 2 chrX 135198067 135205476 -31444820 - L1Md_A LINE L1 0 6582 1 2 1616 12744 116 26 16 chrX 135205475 135208313 -31441983 - L1VL1 LINE L1 -634 3064 194 2 1616 309 376 18 44 chrX 135208437 135208544 -31441752 + B3A SINE B2 62 167 -49 2 1616 607 57 0 22 chrX 135208544 135208634 -31441662 + (TA)n Simple_repeat Simple_repeat 2 89 0 2 1616 489 76 0 0 chrX 135208704 135208770 -31441526 + (GAAA)n Simple_repeat Simple_repeat 3 68 0 2 1616 1617 54 0 0 chrX 135209216 135209420 -31440876 - L1_Mus2 LINE L1 0 6566 6363 2 1616 312 286 80 40 chrX 135209611 135209786 -31440510 - L1MEf LINE L1 -5210 990 809 2 1616 308 258 99 73 chrX 135209818 135210132 -31440164 - L1M2 LINE L1 -2696 3444 3123 2 1616 269 184 54 41 chrX 135210261 135210408 -31439888 + (TTATA)n Simple_repeat Simple_repeat 5 153 0 2 1616 938 118 65 0 chrX 135210465 135210618 -31439678 - B2_Mm2 SINE B2 -10 185 23 2 1616 387 252 14 21 chrX 135210629 135210774 -31439522 - L1M2 LINE L1 -3349 2791 2648 2 1616 3449 97 70 2 chrX 135211024 135211629 -31438667 - Lx2A1 LINE L1 -869 6139 5492 2 1616 237 33 0 0 chrX 135211629 135211659 -31438637 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2 1616 2576 181 99 4 chrX 135211659 135211832 -31438464 - Lx2A1 LINE L1 -386 5497 5285 2 1616 1651 65 5 0 chrX 135211832 135212048 -31438248 - L1_Mus2 LINE L1 0 6566 6350 2 1616 2508 183 89 50 chrX 135212048 135212097 -31438199 - Lx2A1 LINE L1 -590 5293 5258 2 1616 1720 179 93 32 chrX 135212097 135212538 -31437758 - BGLII_B LTR ERVK -6 435 1 2 1616 427 260 0 51 chrX 135212538 135212676 -31437620 - L1M2 LINE L1 -3467 2676 2546 2 1616 821 266 108 23 chrX 135212674 135213263 -31437033 + L1M3 LINE L1 4941 5586 -714 2 1616 205 229 21 0 chrX 135213266 135213314 -31436982 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 2 1616 767 230 11 11 chrX 135213397 135213586 -31436710 + Lx7 LINE L1 6845 7033 -663 2 1616 18587 61 2 1 chrX 135213584 135216812 -31433484 - L1Md_A LINE L1 -2185 3698 465 2 1616 382 241 60 36 chrX 135216984 135217152 -31433144 - Lx6 LINE L1 -1 7459 7288 2 1616 1021 95 0 0 chrX 135217356 135217493 -31432803 + B1_Mus1 SINE Alu 5 141 -7 2 1616 340 55 36 0 chrX 135217496 135217551 -31432745 + (CATA)n Simple_repeat Simple_repeat 2 58 0 2 1616 1023 284 134 49 chrX 135217886 135218336 -31431960 + L1M2 LINE L1 4433 4899 -1244 2 1616 3068 48 40 3 chrX 135218336 135218716 -31431580 - MTA_Mm LTR MaLR -2 394 1 2 1616 1023 292 146 46 chrX 135218716 135219540 -31430756 + L1M2 LINE L1 4870 5825 -55 2 1616 306 0 0 0 chrX 135219577 135219611 -31430685 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 1616 240 308 13 13 chrX 135219805 135219884 -31430412 + ID4 SINE ID 2 80 -3 2 1616 606 188 112 20 chrX 135219938 135220056 -31430240 - Lx3B LINE L1 -1 6972 6854 2 1616 207 0 0 0 chrX 135220056 135220079 -31430217 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 2 1616 606 188 112 20 chrX 135220079 135220112 -31430184 - Lx3B LINE L1 -120 6853 6807 2 1616 306 0 0 0 chrX 135220825 135220859 -31429437 + (TTA)n Simple_repeat Simple_repeat 2 35 0 2 1616 589 306 22 27 chrX 135221021 135221206 -31429090 + B4 SINE B4 3 186 -106 2 1616 204 67 0 0 chrX 135221215 135221245 -31429051 + (TTAG)n Simple_repeat Simple_repeat 3 32 0 2 1616 567 0 0 0 chrX 135221542 135221605 -31428691 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 1616 2231 213 142 96 chrX 135222449 135222802 -31427494 + RMER1C Other Other 566 891 -451 3 1616 1930 100 10 7 chrX 135222802 135223095 -31427201 - Lx2 LINE L1 -8 6989 6696 3 1616 2231 213 142 96 chrX 135223095 135223482 -31426814 + RMER1C Other Other 892 1340 -2 3 1616 977 129 0 0 chrX 135223495 135223642 -31426654 + B1_Mus1 SINE Alu 1 147 -1 3 1616 894 201 27 31 chrX 135223771 135223982 -31426314 + B3A SINE B2 2 205 -11 3 1616 252 189 0 0 chrX 135223990 135224064 -31426232 + (CA)n Simple_repeat Simple_repeat 2 75 0 3 1616 510 207 7 0 chrX 135224228 135224363 -31425933 + Lx9 LINE L1 7502 7637 -7 3 1616 319 272 25 0 chrX 135224424 135224505 -31425791 + ID4_ SINE ID 1 83 0 3 1616 1014 256 0 18 chrX 135225088 135225307 -31424989 - B3 SINE B2 0 216 2 3 1616 32 0 0 0 chrX 135225368 135225400 -31424896 + AT_rich Low_complexity Low_complexity 1 32 0 3 1616 388 271 12 0 chrX 135225414 135225584 -31424712 + (TA)n Simple_repeat Simple_repeat 2 173 0 3 1616 326 284 91 14 chrX 135225614 135225757 -31424539 - L1M5 LINE L1 -496 5683 5530 3 1616 1931 275 78 21 chrX 135225799 135226412 -31423884 - Lx8 LINE L1 -403 7070 6423 3 1616 5584 53 0 0 chrX 135227117 135227801 -31422495 + L1Md_F2 LINE L1 5880 6563 -19 3 1616 34 24 0 0 chrX 135227878 135227919 -31422377 + AT_rich Low_complexity Low_complexity 1 41 0 3 1616 203 352 42 21 chrX 135227985 135228127 -31422169 - L2 LINE L2 -661 2758 2614 3 1616 187 326 41 21 chrX 135228171 135228268 -31422028 - L2 LINE L2 -950 2469 2371 3 1616 371 298 101 37 chrX 135228446 135228634 -31421662 + Lx9 LINE L1 7112 7311 -333 3 1616 1026 152 45 0 chrX 135228721 135228898 -31421398 + B2_Mm2 SINE B2 3 187 -8 3 1616 36 40 0 0 chrX 135228974 135229024 -31421272 + AT_rich Low_complexity Low_complexity 1 50 0 3 1616 23 33 0 0 chrX 135229056 135229086 -31421210 + AT_rich Low_complexity Low_complexity 1 30 0 3 1616 33823 82 10 21 chrX 135229087 135235510 -31414786 - L1Md_A LINE L1 -1 6581 238 3 1616 243 292 0 14 chrX 135235646 135235719 -31414577 + (ATGGTG)n Simple_repeat Simple_repeat 6 77 0 3 1616 314 357 35 21 chrX 135235960 135236103 -31414193 - L3 LINE CR1 -40 4449 4305 3 1616 515 296 32 19 chrX 135237850 135238011 -31412285 - RSINE1 SINE B4 0 165 2 3 1616 388 299 14 142 chrX 135238426 135238574 -31411722 - B3 SINE B2 -86 130 2 3 1616 806 231 118 43 chrX 135238939 135239219 -31411077 - Lx9 LINE L1 -561 7083 6783 3 1616 22741 34 1 1 chrX 135239217 135241988 -31408308 + L1Md_F2 LINE L1 2814 5585 -298 3 1616 8019 49 1 2 chrX 135241989 135242976 -31407320 + L1Md_F2 LINE L1 5587 6572 -10 3 1616 3769 264 47 65 chrX 135242982 135244355 -31405941 - Lx9 LINE L1 -848 6796 5268 3 1616 1270 109 16 5 chrX 135244355 135244548 -31405748 + B2_Mm2 SINE B2 1 195 0 3 1616 3769 225 56 95 chrX 135244548 135245330 -31404966 - Lx9 LINE L1 -580 5267 4518 3 1616 2786 187 41 32 chrX 135245340 135245897 -31404399 - RMER15 LTR ERVL 0 575 14 3 1616 1185 212 28 25 chrX 135245958 135246277 -31404019 - Lx9 LINE L1 -1403 4444 4125 3 1616 620 273 66 10 chrX 135247119 135247315 -31402981 + B3 SINE B2 3 209 -7 3 1616 492 254 72 58 chrX 135247378 135247516 -31402780 + RSINE1 SINE B4 4 143 -22 3 1616 1075 129 6 6 chrX 135248134 135248298 -31401998 + B2_Mm2 SINE B2 1 164 -31 3 1616 366 311 124 30 chrX 135249292 135249663 -31400633 - LTR37A LTR ERV1 -20 406 1 3 1616 222 274 0 0 chrX 135250137 135250188 -31400108 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1616 195 129 0 0 chrX 135250253 135250284 -31400012 + (TATATG)n Simple_repeat Simple_repeat 6 36 0 3 1616 918 176 67 5 chrX 135250399 135250593 -31399703 + B3 SINE B2 9 214 -2 3 1616 600 53 0 0 chrX 135251017 135251093 -31399203 + (TA)n Simple_repeat Simple_repeat 2 77 0 3 1616 331 331 42 35 chrX 135251137 135251281 -31399015 - MIRc SINE MIR -121 147 3 3 1616 220 341 34 55 chrX 135251517 135251668 -31398628 + MIRc SINE MIR 49 205 -3 3 1616 223 279 21 31 chrX 135255616 135255712 -31394584 - MIRb SINE MIR -31 237 143 3 1616 660 227 64 16 chrX 135255728 135255916 -31394380 - B3A SINE B2 0 198 2 3 1616 256 320 53 46 chrX 135255924 135256055 -31394241 - MIR SINE MIR -118 144 13 3 1616 248 221 43 29 chrX 135256998 135257068 -31393228 - L2c LINE L2 -203 3184 3114 3 1616 3997 129 37 16 chrX 135258284 135258930 -31391366 - Lx3B LINE L1 -3 6970 6311 3 1616 1644 75 0 0 chrX 135258948 135259161 -31391135 - L1_Mus1 LINE L1 -4 6563 6351 3 1616 309 51 0 0 chrX 135259338 135259377 -31390919 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 1616 607 67 29 0 chrX 135259472 135259577 -31390719 - L1Md_F2 LINE L1 0 6582 6475 3 1616 27 62 0 0 chrX 135259890 135259938 -31390358 + AT_rich Low_complexity Low_complexity 1 48 0 3 1616 265 245 0 0 chrX 135260210 135260263 -31390033 + ID4_ SINE ID 3 55 -28 3 1616 375 119 0 0 chrX 135260500 135260567 -31389729 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 1616 369 0 0 0 chrX 135260568 135260609 -31389687 + (GA)n Simple_repeat Simple_repeat 1 41 0 3 1616 229 271 0 0 chrX 135260776 135260824 -31389472 + polypyrimidine Low_complexity Low_complexity 4 51 0 3 1616 800 292 16 65 chrX 135261630 135261993 -31388303 - ORR1E LTR MaLR -12 367 1 3 1616 576 273 14 0 chrX 135262004 135262143 -31388153 + B1F1 SINE Alu 1 141 -8 3 1616 22 35 0 0 chrX 135262150 135262179 -31388117 + AT_rich Low_complexity Low_complexity 1 29 0 3 1616 21 0 0 0 chrX 135262327 135262348 -31387948 + AT_rich Low_complexity Low_complexity 1 21 0 3 1616 453 340 69 69 chrX 135262541 135262708 -31387588 + B4A SINE B4 5 183 -109 3 1616 1140 112 60 27 chrX 135262708 135262891 -31387405 - B2_Mm2 SINE B2 -6 189 1 3 1616 453 340 69 69 chrX 135262891 135263011 -31387285 + B4A SINE B4 184 292 0 3 1616 251 250 96 14 chrX 135263133 135263206 -31387090 - Lx8 LINE L1 -1580 5893 5815 3 1616 252 0 0 0 chrX 135263211 135263239 -31387057 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 1616 314 347 69 87 chrX 135263302 135263577 -31386719 - L2c LINE L2 -12 3375 3106 3 1616 532 240 87 16 chrX 135263984 135264111 -31386185 + ID_B1 SINE B4 81 216 -8 3 1616 1122 75 0 13 chrX 135264548 135264697 -31385599 + B1_Mus1 SINE Alu 2 148 0 3 1616 348 371 51 11 chrX 135265322 135265499 -31384797 - MIR3 SINE MIR -23 185 2 3 1616 303 28 0 0 chrX 135266201 135266237 -31384059 + (CAGA)n Simple_repeat Simple_repeat 3 38 0 3 1617 1881 149 18 24 chrX 135266531 135266862 -31383434 - ORR1A4 LTR MaLR 0 329 1 3 1617 206 105 26 0 chrX 135266885 135266923 -31383373 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1617 236 360 138 16 chrX 135267406 135267595 -31382701 + MIRb SINE MIR 52 263 -5 3 1617 426 314 49 14 chrX 135268233 135268375 -31381921 - RSINE1 SINE B4 -16 149 3 3 1617 676 369 81 14 chrX 135268706 135269126 -31381170 + LTR16B2 LTR ERVL 3 463 0 3 1617 810 0 0 0 chrX 135270774 135270864 -31379432 + (GGAAA)n Simple_repeat Simple_repeat 3 92 0 3 1617 530 345 107 11 chrX 135270874 135271135 -31379161 + B4 SINE B4 1 286 -6 3 1617 530 93 0 11 chrX 135272259 135272346 -31377950 + (TC)n Simple_repeat Simple_repeat 1 86 0 3 1617 494 330 117 47 chrX 135272495 135272880 -31377416 + L3b LINE CR1 62 473 -9 3 1617 286 175 0 24 chrX 135274049 135274131 -31376165 + CT-rich Low_complexity Low_complexity 1 80 0 3 1617 21 36 0 0 chrX 135275835 135275863 -31374433 + AT_rich Low_complexity Low_complexity 1 28 0 3 1617 279 0 0 0 chrX 135276074 135276105 -31374191 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1617 3940 95 23 28 chrX 135276438 135277047 -31373249 - Lx LINE L1 -6 6648 6043 3 1617 1217 34 7 0 chrX 135277189 135277335 -31372961 + B1_Mm SINE Alu 1 147 0 3 1617 296 309 136 29 chrX 135279110 135279250 -31371046 + MTE2a LTR MaLR 218 372 -7 3 1617 291 256 92 11 chrX 135279342 135279429 -31370867 + MTEa LTR MaLR 1 94 -285 3 1617 878 193 100 22 chrX 135279429 135279699 -31370597 + Lx9 LINE L1 7354 7644 0 3 1617 22 80 0 0 chrX 135279936 135279986 -31370310 + AT_rich Low_complexity Low_complexity 1 50 0 3 1617 1066 86 0 0 chrX 135280244 135280384 -31369912 - B1_Mus1 SINE Alu -7 141 2 3 1617 396 362 42 7 chrX 135280775 135280917 -31369379 + RSINE1 SINE B4 4 150 -15 3 1617 29 70 0 0 chrX 135280979 135281036 -31369260 + AT_rich Low_complexity Low_complexity 1 57 0 3 1617 559 328 114 27 chrX 135281179 135281583 -31368713 - L1MD1 LINE L1 -191 6051 5613 3 1617 3600 285 44 34 chrX 135281683 135282738 -31367558 - Lx8 LINE L1 -124 7349 6285 3 1617 454 311 167 17 chrX 135282744 135282924 -31367372 - MTD LTR MaLR -15 404 179 3 1617 700 224 73 18 chrX 135282951 135283171 -31367125 - Lx8 LINE L1 -1785 5911 5648 3 1617 409 315 25 30 chrX 135283171 135283350 -31366946 - ORR1D2 LTR MaLR -200 184 1 3 1617 1153 83 0 0 chrX 135283977 135284122 -31366174 + B1_Mus2 SINE Alu 2 146 -1 3 1617 32 57 0 0 chrX 135284189 135284242 -31366054 + AT_rich Low_complexity Low_complexity 1 53 0 3 1617 234 310 39 8 chrX 135284432 135284562 -31365734 - Lx7 LINE L1 0 7696 7563 3 1617 462 329 14 14 chrX 135284591 135284798 -31365498 - Lx7 LINE L1 -330 7366 7160 3 1617 311 326 78 0 chrX 135284902 135285043 -31365253 - Lx9 LINE L1 -209 7435 7284 3 1617 780 188 131 70 chrX 135286059 135286288 -31364008 + Lx5 LINE L1 6808 7050 0 3 1617 302 216 0 0 chrX 135286295 135286346 -31363950 - HAL1-3A_ME LINE L1 -832 2026 1976 3 1617 318 232 79 18 chrX 135286522 135286636 -31363660 - Lx9 LINE L1 -198 7446 7326 3 1617 462 83 0 0 chrX 135286724 135286796 -31363500 + (TG)n Simple_repeat Simple_repeat 2 73 0 3 1617 225 309 138 0 chrX 135287276 135287399 -31362897 - MER34A1 LTR ERV1 -22 565 426 3 1617 505 337 80 31 chrX 135287453 135287825 -31362471 - LTR48 LTR ERV1 -302 485 17 3 1617 231 208 0 38 chrX 135287910 135287990 -31362306 - Lx6 LINE L1 -56 7404 7328 3 1617 250 323 0 0 chrX 135288077 135288142 -31362154 - Ricksha_c DNA MuDR -1238 810 746 4 1617 2034 180 42 3 chrX 135288197 135288576 -31361720 + Lx9 LINE L1 6954 7347 -297 4 1617 440 136 11 11 chrX 135288579 135288668 -31361628 + Lx9 LINE L1 7555 7643 -1 4 1617 551 335 18 107 chrX 135288680 135289017 -31361279 - Ricksha_c DNA MuDR -1313 735 429 4 1617 207 69 0 0 chrX 135289257 135289286 -31361010 + (CAA)n Simple_repeat Simple_repeat 2 30 0 4 1617 29 47 0 0 chrX 135289415 135289458 -31360838 + AT_rich Low_complexity Low_complexity 1 43 0 4 1617 297 364 7 7 chrX 135289680 135289832 -31360464 - Lx9 LINE L1 -267 7377 7226 4 1617 2749 66 0 27 chrX 135290001 135290373 -31359923 - L1_Mus1 LINE L1 -1 6566 6205 4 1617 617 329 11 34 chrX 135290375 135290554 -31359742 - B3 SINE B2 -9 207 33 4 1617 604 312 26 0 chrX 135290597 135290789 -31359507 - B3A SINE B2 0 198 2 4 1617 435 247 45 70 chrX 135290994 135291225 -31359071 - MER31-int LTR ERV1 -1330 4026 3650 3 1617 21 82 0 0 chrX 135291462 135291511 -31358785 + AT_rich Low_complexity Low_complexity 1 49 0 4 1617 653 324 8 59 chrX 135291864 135292033 -31358263 - Lx8 LINE L1 -531 6942 6778 4 1617 1155 192 121 123 chrX 135292033 135292218 -31358078 - ORR1C2 LTR MaLR -4 380 170 4 1617 195 129 0 0 chrX 135292218 135292249 -31358047 + (CAGG)n Simple_repeat Simple_repeat 1 31 0 4 1617 1155 192 121 123 chrX 135292249 135292444 -31357852 - ORR1C2 LTR MaLR -215 169 2 4 1617 653 324 8 59 chrX 135292444 135292527 -31357769 - Lx8 LINE L1 -696 6777 6703 4 1617 219 139 0 0 chrX 135292706 135292742 -31357554 + (TCC)n Simple_repeat Simple_repeat 2 37 0 4 1617 320 0 25 0 chrX 135292783 135292823 -31357473 + (TC)n Simple_repeat Simple_repeat 2 42 0 4 1617 208 212 0 29 chrX 135293069 135293137 -31357159 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 1617 21 57 0 0 chrX 135293562 135293597 -31356699 + AT_rich Low_complexity Low_complexity 1 35 0 4 1617 1016 226 124 10 chrX 135293862 135294153 -31356143 - Lx8 LINE L1 -1559 5914 5591 4 1617 253 298 74 11 chrX 135294776 135294871 -31355425 + MLT1D LTR MaLR 12 112 -393 4 1617 495 0 0 0 chrX 135295050 135295105 -31355191 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 1617 303 93 0 0 chrX 135295105 135295147 -31355149 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1617 26 50 0 0 chrX 135295279 135295319 -31354977 + AT_rich Low_complexity Low_complexity 1 40 0 4 1617 450 298 30 60 chrX 135295389 135295589 -31354707 + B3A SINE B2 5 198 0 4 1617 278 385 35 97 chrX 135295608 135295835 -31354461 + MLT1D LTR MaLR 170 382 -123 4 1617 605 292 42 65 chrX 135296579 135296887 -31353409 + Lx9 LINE L1 7175 7475 -169 4 1617 21 36 0 0 chrX 135297140 135297168 -31353128 + AT_rich Low_complexity Low_complexity 1 28 0 4 1617 323 281 73 34 chrX 135297813 135297990 -31352306 - L1MA8 LINE L1 -106 6185 6002 4 1617 386 355 61 48 chrX 135298112 135298343 -31351953 - MIRb SINE MIR -6 262 29 4 1617 227 342 61 35 chrX 135298461 135298576 -31351720 - L2c LINE L2 -17 3370 3253 4 1617 319 284 47 54 chrX 135299605 135299754 -31350542 + Charlie23a DNA MER1_type 111 258 -81 4 1617 910 326 29 14 chrX 135299769 135300046 -31350250 + B4A SINE B4 9 289 -3 4 1617 302 214 0 12 chrX 135300106 135300191 -31350105 + T-rich Low_complexity Low_complexity 2 85 0 4 1617 439 184 0 0 chrX 135300212 135300288 -31350008 - B1_Mus2 SINE Alu -10 137 62 4 1617 261 260 233 17 chrX 135300314 135300486 -31349810 - ORR1D1 LTR MaLR 0 374 166 4 1617 464 83 0 0 chrX 135300486 135300546 -31349750 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 1617 1278 85 0 0 chrX 135300546 135300723 -31349573 + (GGGAA)n Simple_repeat Simple_repeat 4 180 0 4 1617 974 107 0 7 chrX 135300726 135300877 -31349419 + (GAA)n Simple_repeat Simple_repeat 3 152 0 4 1617 353 148 0 16 chrX 135301089 135301151 -31349145 + HAL1-3A_ME LINE L1 1958 2018 -840 4 1617 372 178 0 0 chrX 135301156 135301229 -31349067 + (TA)n Simple_repeat Simple_repeat 1 73 0 4 1617 502 197 16 0 chrX 135301267 135301389 -31348907 + (TA)n Simple_repeat Simple_repeat 1 124 0 4 1617 363 320 0 10 chrX 135301745 135301849 -31348447 + Arthur1 DNA Tip100 207 309 -3638 4 1617 326 297 140 71 chrX 135302089 135302397 -31347899 + Arthur1 DNA Tip100 3457 3785 -162 4 1617 1173 61 0 0 chrX 135302398 135302545 -31347751 + B1_Mus1 SINE Alu 1 147 -1 4 1617 259 277 46 85 chrX 135302816 135302946 -31347350 - L2a LINE L2 0 3426 3302 4 1617 228 67 0 0 chrX 135303411 135303441 -31346855 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1617 243 300 0 0 chrX 135303526 135303586 -31346710 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 1617 435 139 109 18 chrX 135303705 135303815 -31346481 + Lx9 LINE L1 7518 7637 -7 4 1617 690 13 0 0 chrX 135305272 135305351 -31344945 + (TC)n Simple_repeat Simple_repeat 2 80 0 4 1617 404 299 64 40 chrX 135306147 135306349 -31343947 - MIRc SINE MIR 0 268 62 4 1617 254 321 105 99 chrX 135306723 135306875 -31343421 - MER20 DNA MER1_type -53 166 14 4 1617 194 356 90 36 chrX 135307106 135307272 -31343024 + MIR3 SINE MIR 20 194 -14 4 1617 243 0 0 0 chrX 135307475 135307502 -31342794 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 1617 489 348 19 12 chrX 135307509 135307669 -31342627 - RSINE1 SINE B4 -2 163 3 4 1617 22 56 0 0 chrX 135307836 135307872 -31342424 + AT_rich Low_complexity Low_complexity 1 36 0 4 1617 602 298 61 28 chrX 135307936 135308327 -31341969 + L1MA4 LINE L1 5536 5930 -370 4 1617 351 223 0 31 chrX 135309150 135309247 -31341049 + Lx8 LINE L1 7380 7473 0 4 1617 3169 55 5 2 chrX 135309465 135309864 -31340432 - MTB LTR MaLR 0 400 1 4 1617 766 186 7 21 chrX 135310441 135310575 -31339721 + B1_Mur3 SINE Alu 3 137 -12 4 1617 183 42 0 0 chrX 135310575 135310599 -31339697 + (TTAA)n Simple_repeat Simple_repeat 4 27 0 4 1617 201 218 0 35 chrX 135310875 135310932 -31339364 + A-rich Low_complexity Low_complexity 1 55 0 4 1617 772 338 46 36 chrX 135313132 135313546 -31336750 + Lx8 LINE L1 7039 7456 -17 4 1617 486 0 0 0 chrX 135313808 135313862 -31336434 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 1617 231 318 0 70 chrX 135313897 135313968 -31336328 + RSINE1 SINE B4 92 157 -8 4 1617 603 133 0 0 chrX 135314021 135314149 -31336147 + (GA)n Simple_repeat Simple_repeat 1 128 0 4 1617 255 301 42 0 chrX 135314274 135314363 -31335933 + MIR SINE MIR 84 192 -76 4 1617 221 163 0 0 chrX 135315967 135316010 -31334286 + T-rich Low_complexity Low_complexity 2 44 0 4 1617 324 0 0 0 chrX 135316715 135316751 -31333545 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1617 32 26 0 0 chrX 135316851 135316890 -31333406 + AT_rich Low_complexity Low_complexity 1 39 0 4 1617 2252 109 8 17 chrX 135317437 135317792 -31332504 + L1_Mus4 LINE L1 6209 6560 -76 4 1617 1140 37 0 0 chrX 135318410 135318545 -31331751 + B1_Mus1 SINE Alu 2 136 -12 4 1617 270 0 0 0 chrX 135318547 135318577 -31331719 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 4 1617 348 156 0 0 chrX 135319059 135319149 -31331147 + (TA)n Simple_repeat Simple_repeat 2 91 0 4 1617 1613 139 34 4 chrX 135319160 135319427 -31330869 - Lx3B LINE L1 -6 6967 6693 4 1617 459 20 0 0 chrX 135320112 135320163 -31330133 + L1Md_F2 LINE L1 5536 5586 -297 4 1617 7968 49 3 2 chrX 135320163 135321153 -31329143 + L1Md_F2 LINE L1 5587 6577 -5 4 1617 756 262 72 36 chrX 135321302 135321674 -31328622 + MER63D DNA AcHobo 530 1061 0 4 1617 603 0 0 0 chrX 135322303 135322370 -31327926 + (CAAAC)n Simple_repeat Simple_repeat 2 68 0 4 1617 22 0 0 0 chrX 135323757 135323779 -31326517 + AT_rich Low_complexity Low_complexity 1 22 0 4 1617 25 90 0 0 chrX 135323871 135323938 -31326358 + AT_rich Low_complexity Low_complexity 1 67 0 4 1617 576 0 0 0 chrX 135324624 135324688 -31325608 + (TAG)n Simple_repeat Simple_repeat 3 66 0 4 1617 3125 186 82 4 chrX 135324865 135325546 -31324750 - Lx9 LINE L1 -1 7643 6910 4 1617 1817 170 16 88 chrX 135325549 135325924 -31324372 - ORR1B1 LTR MaLR -8 386 39 4 1617 495 306 0 39 chrX 135326099 135326228 -31324068 - PB1 SINE Alu -3 124 1 4 1617 2152 115 16 0 chrX 135326301 135326623 -31323673 + ORR1A2 LTR MaLR 1 327 0 4 1617 3739 40 31 0 chrX 135326733 135327189 -31323107 + L1Md_F2 LINE L1 5832 6301 -281 4 1617 979 298 33 8 chrX 135327193 135327585 -31322711 + L1MB8 LINE L1 5588 5989 -189 4 1617 315 300 0 9 chrX 135327667 135327778 -31322518 - L1ME1 LINE L1 -41 6133 6024 4 1617 642 216 34 46 chrX 135327819 135328006 -31322290 + B3 SINE B2 5 184 -11 4 1617 283 292 108 27 chrX 135328798 135328946 -31321350 - L1MA10 LINE L1 -6 6328 6169 4 1617 411 310 82 31 chrX 135328962 135329318 -31320978 - L1ME1 LINE L1 -206 5973 5600 4 1617 21 0 0 0 chrX 135329753 135329774 -31320522 + AT_rich Low_complexity Low_complexity 1 21 0 4 1617 341 286 14 95 chrX 135329947 135330066 -31320230 + MER67D LTR ERV1 58 170 -491 4 1617 351 0 0 0 chrX 135330066 135330105 -31320191 + (TAG)n Simple_repeat Simple_repeat 3 41 0 4 1617 341 286 14 95 chrX 135330105 135330132 -31320164 + MER67D LTR ERV1 171 192 -469 4 1617 900 136 7 20 chrX 135330139 135330289 -31320007 + B1_Mur4 SINE Alu 1 148 -2 4 1617 405 264 72 24 chrX 135330307 135330459 -31319837 + MER67D LTR ERV1 67 339 -322 4 1617 492 267 44 0 chrX 135330454 135330589 -31319707 - B1_Mus2 SINE Alu 0 147 7 4 1617 1282 203 99 12 chrX 135330619 135330963 -31319333 - Lx9 LINE L1 -21 7623 7250 4 1617 350 298 78 14 chrX 135331095 135331313 -31318983 - L1MC3 LINE L1 -7 7778 7547 4 1617 342 61 0 0 chrX 135331558 135331607 -31318689 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 4 1617 880 317 43 11 chrX 135332143 135332494 -31317802 - MLT1A0 LTR MaLR 0 365 4 4 1617 23 54 0 0 chrX 135332969 135333006 -31317290 + AT_rich Low_complexity Low_complexity 1 37 0 4 1617 43 35 0 0 chrX 135333725 135333782 -31316514 + AT_rich Low_complexity Low_complexity 1 57 0 4 1617 21 0 0 0 chrX 135334303 135334324 -31315972 + AT_rich Low_complexity Low_complexity 1 21 0 4 1617 344 302 35 0 chrX 135334421 135334507 -31315789 + RSINE1 SINE B4 73 161 -4 4 1617 735 187 25 18 chrX 135335640 135335803 -31314493 + LTR65 LTR ERV1 7 170 -499 4 1617 248 342 100 31 chrX 135335775 135335935 -31314361 + MER90a LTR ERV1 285 455 -159 4 1617 308 292 33 11 chrX 135336018 135336108 -31314188 + LTR65 LTR ERV1 572 663 -6 4 1617 448 148 0 0 chrX 135336668 135336756 -31313540 + L1_Mus3 LINE L1 6549 6636 -2 4 1617 1079 93 0 0 chrX 135336926 135337066 -31313230 + B1_Mus2 SINE Alu 2 141 -6 5 1617 257 51 26 0 chrX 135337070 135337109 -31313187 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 5 1617 215 103 26 0 chrX 135337314 135337353 -31312943 + (CAA)n Simple_repeat Simple_repeat 2 41 0 5 1617 390 314 29 0 chrX 135337380 135337485 -31312811 + Tigger5 DNA MER2_type 101 208 -2198 5 1617 293 376 91 94 chrX 135337524 135337800 -31312496 - B4A SINE B4 -17 275 1 5 1617 262 364 25 25 chrX 135337986 135338186 -31312110 - MER2 DNA MER2_type 0 345 146 5 1617 278 300 179 25 chrX 135338187 135338461 -31311835 - L1MA6 LINE L1 -42 6258 5943 5 1617 932 222 10 19 chrX 135338468 135338675 -31311621 + B3 SINE B2 2 206 -10 5 1617 504 269 105 15 chrX 135338708 135338908 -31311388 - MER2 DNA MER2_type -117 228 11 5 1617 403 350 83 7 chrX 135339198 135339486 -31310810 - L1MC1 LINE L1 -129 6204 5895 5 1617 275 312 31 0 chrX 135339974 135340070 -31310226 - B1F2 SINE Alu -47 102 4 5 1617 584 282 25 25 chrX 135340184 135340384 -31309912 - L1MC2 LINE L1 -45 6299 6100 5 1617 629 215 30 37 chrX 135340428 135340592 -31309704 - Lx4A LINE L1 0 7058 6896 5 1617 453 285 73 8 chrX 135340764 135340888 -31309408 - ID_B1 SINE B4 -11 213 82 5 1617 2185 109 0 0 chrX 135341076 135341387 -31308909 + ORR1A2 LTR MaLR 9 319 -8 5 1617 9890 148 25 16 chrX 135341391 135343166 -31307130 + ORR1A2-int LTR MaLR 1 1792 0 5 1617 1552 118 0 0 chrX 135343169 135343390 -31306906 + ORR1A2 LTR MaLR 5 225 -102 5 1617 1068 141 0 0 chrX 135343413 135343590 -31306706 + (GAA)n Simple_repeat Simple_repeat 2 178 0 5 1617 195 42 0 0 chrX 135343590 135343614 -31306682 + (GGA)n Simple_repeat Simple_repeat 2 25 0 5 1617 7729 65 9 7 chrX 135343652 135344964 -31305332 - L1Md_F2 LINE L1 -16 6566 5242 5 1617 269 311 87 43 chrX 135344972 135345157 -31305139 - L1MCa LINE L1 -6071 437 245 5 1617 205 250 0 0 chrX 135345369 135345421 -31304875 + CT-rich Low_complexity Low_complexity 1 52 0 5 1617 206 219 0 0 chrX 135345424 135345465 -31304831 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1617 1719 268 52 29 chrX 135345632 135346185 -31304111 - Lx8 LINE L1 -3 7470 6905 5 1617 921 34 0 0 chrX 135346253 135346370 -31303926 + B1_Mus1 SINE Alu 1 117 -31 5 1617 706 79 0 10 chrX 135346361 135346463 -31303833 + B1_Mus1 SINE Alu 32 132 -16 5 1617 468 0 0 0 chrX 135346463 135346515 -31303781 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 1617 710 315 24 16 chrX 135346629 135346884 -31303412 - Lx8 LINE L1 -805 6668 6412 5 1617 375 23 0 0 chrX 135346895 135346939 -31303357 + (TTA)n Simple_repeat Simple_repeat 2 45 0 5 1617 642 333 14 58 chrX 135346939 135347162 -31303134 - B4A SINE B4 -77 215 3 5 1617 961 259 128 45 chrX 135347288 135347640 -31302656 + MTD LTR MaLR 1 381 -38 5 1617 267 103 0 0 chrX 135347645 135347684 -31302612 + (CAA)n Simple_repeat Simple_repeat 1 39 0 5 1617 806 184 0 14 chrX 135350027 135350170 -31300126 - B1_Mus1 SINE Alu -7 141 1 5 1617 25 31 0 0 chrX 135350181 135350213 -31300083 + AT_rich Low_complexity Low_complexity 1 32 0 5 1617 849 179 213 6 chrX 135350244 135350418 -31299878 - B3 SINE B2 -6 210 1 5 1617 3482 124 58 3 chrX 135351139 135351711 -31298585 - Lx3C LINE L1 -2 6974 6372 5 1617 3484 185 42 7 chrX 135351721 135352439 -31297857 - Lx3C LINE L1 -2 6974 6232 5 1617 1439 152 29 7 chrX 135352441 135352713 -31297583 + L1_Mur1 LINE L1 986 1263 -5719 5 1617 189 0 0 0 chrX 135353531 135353552 -31296744 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1617 200 349 46 31 chrX 135353660 135353790 -31296506 + MIRb SINE MIR 41 172 -96 5 1617 353 331 120 38 chrX 135354613 135354905 -31295391 + L2a LINE L2 2366 2681 -738 5 1617 459 337 145 32 chrX 135354982 135355417 -31294879 + L2a LINE L2 2938 3421 -5 5 1617 21 57 0 0 chrX 135355745 135355780 -31294516 + AT_rich Low_complexity Low_complexity 1 35 0 5 1617 26 0 0 0 chrX 135355785 135355811 -31294485 + AT_rich Low_complexity Low_complexity 1 26 0 5 1617 283 312 0 20 chrX 135356635 135356733 -31293563 - MLT1A1 LTR MaLR -14 394 299 5 1617 638 268 99 52 chrX 135356726 135356978 -31293318 - MLT-int LTR MaLR -1451 284 21 5 1617 401 0 20 0 chrX 135357416 135357465 -31292831 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1617 300 358 0 0 chrX 135358177 135358272 -31292024 + GA-rich Low_complexity Low_complexity 2 96 0 5 1617 237 139 0 0 chrX 135359428 135359471 -31290825 + (TTTTC)n Simple_repeat Simple_repeat 3 45 0 5 1617 276 51 0 0 chrX 135359472 135359511 -31290785 - B1_Mur4 SINE Alu -1 149 111 5 1617 1140 62 0 0 chrX 135359511 135359655 -31290641 - B1_Mm SINE Alu -3 144 1 5 1617 238 203 28 48 chrX 135360654 135360799 -31289497 + (TAA)n Simple_repeat Simple_repeat 1 142 0 5 1617 319 314 184 9 chrX 135361271 135361483 -31288813 + L1MC4 LINE L1 7794 8042 0 5 1617 491 296 147 54 chrX 135361758 135362072 -31288224 + ORR1E LTR MaLR 8 350 -9 5 1617 773 150 0 15 chrX 135362237 135362372 -31287924 - BC1_Mm scRNA scRNA -19 133 1 5 1617 23 54 0 0 chrX 135363518 135363555 -31286741 + AT_rich Low_complexity Low_complexity 1 37 0 5 1617 377 300 75 0 chrX 135363632 135363752 -31286544 - B4A SINE B4 -41 251 123 5 1617 398 154 13 0 chrX 135363973 135364051 -31286245 + (TA)n Simple_repeat Simple_repeat 2 80 0 5 1617 1626 246 24 106 chrX 135364057 135364268 -31286028 - MTD LTR MaLR 0 419 212 5 1617 1968 133 62 0 chrX 135364268 135364576 -31285720 - ORR1A2 LTR MaLR 0 327 1 5 1617 1626 246 24 106 chrX 135364576 135364677 -31285619 - MTD LTR MaLR -208 211 110 5 1617 5889 29 0 25 chrX 135364677 135365393 -31284903 + L1Md_F2 LINE L1 5872 6569 -13 5 1617 1626 246 24 106 chrX 135365393 135365534 -31284762 - MTD LTR MaLR -310 109 2 5 1617 252 218 0 35 chrX 135365765 135365822 -31284474 - B4 SINE B4 -207 85 31 5 1617 183 100 0 0 chrX 135365845 135365875 -31284421 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1617 341 336 0 70 chrX 135368644 135368772 -31281524 - MamSINE1 SINE tRNA -171 119 1 5 1617 225 0 0 0 chrX 135370145 135370170 -31280126 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1617 336 24 0 0 chrX 135370174 135370215 -31280081 + (GA)n Simple_repeat Simple_repeat 1 41 0 5 1617 207 333 160 17 chrX 135370225 135370344 -31279952 - MIR3 SINE MIR -63 145 10 5 1617 21 0 0 0 chrX 135370829 135370850 -31279446 + AT_rich Low_complexity Low_complexity 1 21 0 5 1617 380 82 0 16 chrX 135371347 135371409 -31278887 + (GAAAA)n Simple_repeat Simple_repeat 4 64 0 5 1617 242 324 55 9 chrX 135371505 135371614 -31278682 + L4 LINE RTE 167 280 -1749 5 1617 394 271 10 0 chrX 135376620 135376716 -31273580 - MER58C DNA MER1_type 0 215 119 5 1617 225 0 0 0 chrX 135376750 135376775 -31273521 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1617 180 77 0 0 chrX 135378620 135378646 -31271650 + (TTTTG)n Simple_repeat Simple_repeat 4 29 0 5 1617 26 64 0 0 chrX 135379070 135379117 -31271179 + AT_rich Low_complexity Low_complexity 1 47 0 5 1617 186 133 0 0 chrX 135380329 135380359 -31269937 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1617 26 0 0 0 chrX 135381300 135381326 -31268970 + AT_rich Low_complexity Low_complexity 1 26 0 5 1617 1296 40 17 11 chrX 135381533 135381712 -31268584 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 1617 282 56 0 0 chrX 135381712 135381748 -31268548 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 5 1617 546 16 0 0 chrX 135384373 135384436 -31265860 + (GA)n Simple_repeat Simple_repeat 2 64 0 5 1617 549 135 0 0 chrX 135384434 135384523 -31265773 + (GGA)n Simple_repeat Simple_repeat 2 90 0 5 1617 772 181 271 0 chrX 135384530 135384696 -31265600 + B3 SINE B2 1 211 -5 5 1617 323 338 113 44 chrX 135384849 135385078 -31265218 + B4A SINE B4 6 250 -42 5 1617 207 225 48 144 chrX 135385973 135386077 -31264219 - L2 LINE L2 -639 2780 2687 5 1617 512 214 10 10 chrX 135386513 135386617 -31263679 + RSINE1 SINE B4 4 107 -58 5 1617 248 274 0 0 chrX 135386651 135386724 -31263572 + GA-rich Low_complexity Low_complexity 2 74 0 5 1617 597 261 7 22 chrX 135387729 135387866 -31262430 - MamSINE1 SINE tRNA -130 160 26 5 1617 282 308 115 0 chrX 135388732 135388836 -31261460 - MIR3 SINE MIR 0 208 93 5 1617 6161 44 1 1 chrX 135388930 135389686 -31260610 + L1Md_F3 LINE L1 5829 6584 0 5 1617 27 62 0 0 chrX 135389686 135389734 -31260562 + AT_rich Low_complexity Low_complexity 1 48 0 5 1617 180 0 0 0 chrX 135390930 135390950 -31259346 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1617 308 303 160 14 chrX 135391674 135391818 -31258478 - MIR3 SINE MIR -3 205 41 5 1617 257 355 0 0 chrX 135391899 135391975 -31258321 + ID4 SINE ID 8 83 0 5 1617 261 373 88 0 chrX 135392471 135392688 -31257608 + MIR SINE MIR 23 258 -4 5 1617 240 243 106 53 chrX 135392751 135392864 -31257432 + MamRep434 DNA TcMar 169 287 -139 5 1617 688 345 135 17 chrX 135393162 135393636 -31256660 + L3 LINE CR1 3825 4354 -135 5 1617 236 30 30 0 chrX 135393949 135393982 -31256314 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1617 1006 95 0 0 chrX 135393982 135394119 -31256177 - B1_Mus2 SINE Alu -10 137 1 5 1617 229 347 53 0 chrX 135394613 135394708 -31255588 - L2a LINE L2 -22 3404 3305 5 1618 406 220 33 0 chrX 135397447 135397538 -31252758 + PB1D10 SINE Alu 19 112 -5 5 1618 734 287 14 34 chrX 135397556 135397765 -31252531 + ID_B1 SINE B4 20 224 0 5 1618 247 171 39 26 chrX 135397766 135397844 -31252452 + GA-rich Low_complexity Low_complexity 2 80 0 5 1618 570 67 0 0 chrX 135397984 135398059 -31252237 + (GA)n Simple_repeat Simple_repeat 2 76 0 5 1618 444 174 11 34 chrX 135398518 135398607 -31251689 + B4A SINE B4 2 88 -204 5 1618 557 229 189 39 chrX 135398639 135398755 -31251541 + Lx9 LINE L1 7352 7478 -166 5 1618 405 0 0 0 chrX 135398755 135398800 -31251496 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1618 393 22 0 0 chrX 135398800 135398845 -31251451 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 1618 557 229 189 39 chrX 135398845 135398981 -31251315 + Lx9 LINE L1 7479 7642 -2 5 1618 700 291 68 25 chrX 135399724 135400287 -31250009 - L1_Rod LINE L1 -673 5627 4960 6 1618 649 316 22 6 chrX 135400327 135400505 -31249791 - B3A SINE B2 -7 191 11 6 1618 257 258 174 61 chrX 135401143 135401275 -31249021 - B1F SINE Alu -1 148 2 6 1618 1623 250 123 53 chrX 135401348 135402021 -31248275 - Lx9 LINE L1 0 7644 6925 6 1618 294 365 83 21 chrX 135402335 135402528 -31247768 - MIRb SINE MIR -1 267 63 6 1618 1089 175 24 0 chrX 135402817 135403023 -31247273 + MTC LTR MaLR 1 211 -210 6 1618 201 147 0 0 chrX 135403211 135403245 -31247051 + (GGAA)n Simple_repeat Simple_repeat 2 35 0 6 1618 772 274 18 22 chrX 135403252 135403280 -31247016 + MTC LTR MaLR 181 206 -201 6 1618 1088 128 6 0 chrX 135403280 135403459 -31246837 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 6 1618 865 235 15 15 chrX 135403459 135403658 -31246638 + MTC LTR MaLR 223 421 0 6 1618 22 103 0 0 chrX 135403748 135403826 -31246470 + AT_rich Low_complexity Low_complexity 1 78 0 6 1618 188 111 31 31 chrX 135403826 135403891 -31246405 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 6 1618 242 373 96 36 chrX 135404129 135404296 -31246000 - MLT1F2 LTR MaLR -84 476 300 6 1618 219 258 88 5 chrX 135404489 135404583 -31245713 - MIRb SINE MIR -61 201 101 6 1618 431 261 162 17 chrX 135404773 135405076 -31245220 + L1M2 LINE L1 5132 5474 -829 6 1618 333 0 0 0 chrX 135405076 135405113 -31245183 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1618 431 256 201 11 chrX 135405113 135405197 -31245099 + L1M2 LINE L1 5475 5581 -722 6 1618 1485 198 41 95 chrX 135405262 135405630 -31244666 - ORR1C2 LTR MaLR 0 384 37 6 1618 235 292 0 0 chrX 135405629 135405677 -31244619 - ID_B1 SINE B4 -78 146 99 6 1618 32192 91 7 7 chrX 135406215 135411357 -31238939 + L1Md_A LINE L1 446 5616 -684 6 1618 7580 72 4 0 chrX 135411357 135412345 -31237951 + L1Md_F2 LINE L1 5588 6579 -3 6 1618 1215 249 24 22 chrX 135412345 135412390 -31237906 + L1Md_A LINE L1 5617 5665 -635 6 1618 32 0 0 0 chrX 135412829 135412861 -31237435 + AT_rich Low_complexity Low_complexity 1 32 0 6 1618 810 198 39 22 chrX 135413220 135413401 -31236895 - B2_Mm2 SINE B2 -8 187 4 6 1618 1361 58 35 0 chrX 135413791 135413964 -31236332 - B2_Mm2 SINE B2 -14 181 3 6 1618 2192 115 3 9 chrX 135414088 135414404 -31235892 + Lx2A LINE L1 6655 6968 -40 6 1618 345 167 0 77 chrX 135414375 135414479 -31235817 + Lx2A LINE L1 6902 6997 -11 6 1618 441 0 0 0 chrX 135414513 135414562 -31235734 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1618 378 0 0 0 chrX 135414562 135414603 -31235693 + (GA)n Simple_repeat Simple_repeat 2 43 0 6 1618 2451 191 73 42 chrX 135414863 135415312 -31234984 - RLTR20D LTR ERVK 0 568 102 6 1618 3419 85 8 17 chrX 135415312 135415789 -31234507 - L1Md_F2 LINE L1 -12 6570 6098 6 1618 2451 191 73 42 chrX 135415789 135415890 -31234406 - RLTR20D LTR ERVK -467 101 1 6 1618 6127 142 57 7 chrX 135415896 135417090 -31233206 - MYSERV16_I-int LTR ERVK -6 2320 1067 6 1618 2608 195 80 41 chrX 135417080 135417732 -31232564 - MYSERV16_I-int LTR ERVK -1373 953 277 6 1618 691 272 11 57 chrX 135417740 135418021 -31232275 - RMER3D-int LTR ERVK -1463 1379 1112 6 1618 192 244 0 24 chrX 135418744 135418786 -31231510 + L4 LINE RTE 1083 1123 -906 6 1618 2546 184 65 31 chrX 135418899 135419438 -31230858 - RLTR20D LTR ERVK -11 557 1 6 1618 468 162 0 9 chrX 135419708 135419814 -31230482 - L1_Mus3 LINE L1 -1 6637 6533 6 1618 11424 104 21 3 chrX 135419816 135421584 -31228712 - MusHAL1 LINE L1 -910 1802 4 6 1618 2704 197 5 30 chrX 135421553 135421686 -31228610 - L1Md_F LINE L1 -5380 1139 1014 6 1618 1029 95 0 45 chrX 135421686 135421700 -31228596 - B1_Mus1 SINE Alu -1 147 139 6 1618 216 0 0 0 chrX 135421700 135421724 -31228572 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1618 1029 95 0 45 chrX 135421724 135421863 -31228433 - B1_Mus1 SINE Alu -10 138 1 6 1618 2704 197 5 30 chrX 135421863 135422305 -31227991 - L1Md_F LINE L1 -5506 1013 578 6 1618 364 263 19 39 chrX 135422522 135422625 -31227671 - B1_Mur4 SINE Alu 0 150 50 6 1618 28 0 0 0 chrX 135422659 135422687 -31227609 + AT_rich Low_complexity Low_complexity 1 28 0 6 1618 1045 80 0 0 chrX 135422688 135422825 -31227471 + B1_Mus1 SINE Alu 1 137 -11 6 1618 243 0 0 0 chrX 135422825 135422852 -31227444 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1618 6954 122 34 5 chrX 135423439 135424538 -31225758 + Lx3C LINE L1 5838 6968 -8 6 1618 423 0 0 0 chrX 135424569 135424616 -31225680 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1618 28 29 0 0 chrX 135424708 135424743 -31225553 + AT_rich Low_complexity Low_complexity 1 35 0 6 1618 945 276 46 3 chrX 135425500 135425827 -31224469 + MER58B DNA MER1_type 1 341 0 6 1618 1204 261 67 32 chrX 135426022 135426363 -31223933 - Lx6 LINE L1 -169 7291 6939 6 1618 479 31 15 0 chrX 135426380 135426445 -31223851 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 1618 2611 208 130 15 chrX 135426445 135426566 -31223730 - Lx6 LINE L1 -596 6864 6748 6 1618 252 86 0 0 chrX 135426566 135426601 -31223695 + (CTG)n Simple_repeat Simple_repeat 1 35 0 6 1618 2611 208 130 15 chrX 135426601 135427064 -31223232 - Lx6 LINE L1 -713 6747 6213 6 1618 1003 31 108 0 chrX 135427208 135427338 -31222958 + B1_Mm SINE Alu 2 145 -2 6 1618 198 0 0 0 chrX 135427346 135427368 -31222928 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 6 1618 536 0 16 0 chrX 135427581 135427645 -31222651 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 6 1618 782 237 65 74 chrX 135427649 135427962 -31222334 + L1_Rod LINE L1 4970 5283 -564 6 1618 1060 107 11 11 chrX 135427962 135428141 -31222155 + L1_Mus3 LINE L1 6459 6637 -1 6 1618 782 237 65 74 chrX 135428141 135428164 -31222132 + L1_Rod LINE L1 5284 5303 -544 6 1618 2187 303 78 16 chrX 135428247 135429062 -31221234 + Lx9 LINE L1 6405 7270 -374 6 1618 2113 166 20 46 chrX 135429062 135429372 -31220924 + ORR1C2 LTR MaLR 1 307 -77 6 1618 1840 169 137 2 chrX 135429372 135429541 -31220755 - RMER4A LTR ERVK -2 464 291 6 1618 258 81 0 0 chrX 135429541 135429578 -31220718 + (CCA)n Simple_repeat Simple_repeat 1 37 0 6 1618 1840 169 137 2 chrX 135429578 135429817 -31220479 - RMER4A LTR ERVK -176 290 3 6 1618 2113 166 20 46 chrX 135429817 135429898 -31220398 + ORR1C2 LTR MaLR 308 382 -2 6 1618 480 308 92 0 chrX 135429945 135430172 -31220124 + Lx9 LINE L1 7307 7554 -90 6 1618 225 326 61 0 chrX 135431398 135431496 -31218800 - L3 LINE CR1 -706 3783 3680 6 1618 249 356 62 22 chrX 135432136 135432314 -31217982 - MER3 DNA MER1_type -23 186 2 6 1618 661 210 91 107 chrX 135432347 135432534 -31217762 - B3A SINE B2 -10 185 2 6 1618 201 195 0 0 chrX 135432684 135432725 -31217571 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1618 5316 97 22 4 chrX 135432851 135434314 -31215982 - Lx3A LINE L1 0 6981 5401 6 1618 7493 45 10 3 chrX 135434708 135435647 -31214649 + L1Md_F2 LINE L1 5637 6581 -1 6 1618 465 99 0 0 chrX 135436096 135436177 -31214119 + (GA)n Simple_repeat Simple_repeat 2 82 0 6 1618 207 0 0 0 chrX 135436214 135436237 -31214059 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 6 1618 1116 255 42 19 chrX 135436237 135436501 -31213795 - Lx5 LINE L1 -18 7032 6763 6 1618 3472 148 34 42 chrX 135436505 135437118 -31213178 - RLTR26 LTR ERVK 0 642 35 6 1618 4459 146 37 5 chrX 135437118 135437931 -31212365 - L1_Mur2 LINE L1 -1489 4388 3550 6 1618 5481 140 27 3 chrX 135437897 135438867 -31211429 - L1_Mur1 LINE L1 -1828 4058 3066 6 1618 1744 187 49 8 chrX 135439542 135439928 -31210368 + L1_Mur1 LINE L1 670 1184 -5798 6 1618 286 152 0 0 chrX 135439917 135439963 -31210333 - Lx2 LINE L1 -635 6362 6317 6 1618 3615 160 43 6 chrX 135439963 135440585 -31209711 + Lx2 LINE L1 6351 6995 -2 6 1618 1773 148 17 17 chrX 135440588 135440771 -31209525 - L1_Mur2 LINE L1 -2354 3523 3347 6 1618 5523 72 3 8 chrX 135440771 135441498 -31208798 - Lx3_Mus LINE L1 0 7009 6287 6 1618 1773 148 17 17 chrX 135441498 135441664 -31208632 - L1_Mur2 LINE L1 -2531 3346 3176 6 1618 216 0 0 0 chrX 135441917 135441941 -31208355 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1618 933 120 42 7 chrX 135441946 135442089 -31208207 - B1_Mus1 SINE Alu 0 148 1 6 1618 201 162 27 0 chrX 135442115 135442152 -31208144 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1618 3887 123 43 8 chrX 135443328 135443886 -31206410 - Lx3B LINE L1 0 6973 6402 6 1618 651 71 0 0 chrX 135443886 135443984 -31206312 + (TC)n Simple_repeat Simple_repeat 2 99 0 6 1618 3887 123 43 8 chrX 135443984 135444057 -31206239 - Lx3B LINE L1 -572 6401 6321 6 1618 1683 139 25 110 chrX 135444057 135444131 -31206165 - ORR1A2 LTR MaLR -4 325 278 6 1618 2171 109 16 3 chrX 135444131 135444454 -31205842 - L1_Mus4 LINE L1 -5 6631 6305 6 1618 1889 111 25 0 chrX 135444454 135444734 -31205562 - ORR1A2 LTR MaLR -40 287 1 6 1618 2758 98 5 28 chrX 135444734 135445166 -31205130 - Lx3B LINE L1 -645 6328 5907 6 1618 899 291 89 0 chrX 135445525 135445827 -31204469 - Lx8 LINE L1 -2 7471 7143 6 1618 293 304 0 47 chrX 135446194 135446301 -31203995 + MIR SINE MIR 28 129 -133 6 1618 180 97 0 0 chrX 135446855 135446886 -31203410 + (A)n Simple_repeat Simple_repeat 1 31 0 6 1618 25 0 0 0 chrX 135448716 135448741 -31201555 + GC_rich Low_complexity Low_complexity 1 25 0 6 1618 204 336 0 52 chrX 135449085 135449201 -31201095 + C-rich Low_complexity Low_complexity 2 111 0 6 1618 226 209 28 56 chrX 135451735 135451806 -31198490 + ID4_ SINE ID 1 69 -14 6 1618 31 26 0 0 chrX 135452143 135452181 -31198115 + AT_rich Low_complexity Low_complexity 1 38 0 6 1618 255 61 0 0 chrX 135452673 135452706 -31197590 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 6 1618 21 0 0 0 chrX 135453512 135453533 -31196763 + AT_rich Low_complexity Low_complexity 1 21 0 6 1618 189 0 0 0 chrX 135453839 135453860 -31196436 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1618 574 271 62 7 chrX 135454586 135454731 -31195565 + RSINE1 SINE B4 9 161 -4 6 1618 405 0 0 0 chrX 135454731 135454776 -31195520 + (TGAA)n Simple_repeat Simple_repeat 2 46 0 6 1618 273 371 34 32 chrX 135455164 135455303 -31194993 - MIR3 SINE MIR -35 173 46 6 1618 32 0 0 0 chrX 135456079 135456111 -31194185 + AT_rich Low_complexity Low_complexity 1 32 0 6 1618 1137 98 0 3 chrX 135456901 135457257 -31193039 + (GA)n Simple_repeat Simple_repeat 1 355 0 6 1618 203 146 0 18 chrX 135457258 135457314 -31192982 + GA-rich Low_complexity Low_complexity 2 56 0 6 1618 690 24 0 0 chrX 135458233 135458317 -31191979 + (TG)n Simple_repeat Simple_repeat 2 85 0 6 1618 366 317 35 14 chrX 135460511 135460652 -31189644 + RSINE1 SINE B4 4 147 -18 6 1618 186 329 26 52 chrX 135462433 135462510 -31187786 - MIRm SINE MIR -12 264 190 6 1618 1096 90 0 0 chrX 135462515 135462659 -31187637 - B1_Mus2 SINE Alu -3 144 1 6 1618 258 81 0 0 chrX 135462779 135462816 -31187480 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 6 1618 749 158 7 0 chrX 135463984 135464123 -31186173 + GA-rich Low_complexity Low_complexity 2 141 0 6 1618 225 0 0 0 chrX 135464584 135464609 -31185687 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 6 1618 423 0 0 0 chrX 135464914 135464961 -31185335 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 7 1618 940 131 38 49 chrX 135464961 135465145 -31185151 - B2_Mm2 SINE B2 -12 183 2 7 1618 1030 168 11 5 chrX 135465182 135465368 -31184928 - B2_Mm2 SINE B2 -7 188 2 7 1618 508 119 236 9 chrX 135465405 135465515 -31184781 - B2_Mm2 SINE B2 -14 181 47 7 1618 258 42 20 40 chrX 135465608 135465658 -31184638 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 7 1618 199 315 0 82 chrX 135465984 135466081 -31184215 + L2a LINE L2 3308 3396 -30 7 1618 294 255 68 10 chrX 135466894 135466997 -31183299 + CT-rich Low_complexity Low_complexity 1 109 0 7 1618 281 201 249 0 chrX 135467674 135467853 -31182443 - Lx9 LINE L1 0 7644 7423 7 1618 195 69 0 0 chrX 135467898 135467927 -31182369 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 1618 405 0 0 0 chrX 135467927 135467971 -31182325 + (GA)n Simple_repeat Simple_repeat 1 45 0 7 1618 390 263 96 17 chrX 135468416 135468594 -31181702 + MER53 DNA hAT 2 193 0 7 1618 461 324 84 0 chrX 135469817 135469959 -31180337 - RSINE1 SINE B4 -11 154 1 7 1618 261 347 66 25 chrX 135469963 135470084 -31180212 - MIRb SINE MIR -109 159 34 7 1618 261 0 0 0 chrX 135470834 135470863 -31179433 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1618 960 206 137 11 chrX 135471100 135471384 -31178912 + Lx9 LINE L1 7318 7637 -7 7 1618 185 0 40 0 chrX 135471584 135471609 -31178687 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 1618 338 288 91 86 chrX 135474381 135474567 -31175729 + MER5A DNA MER1_type 3 189 0 7 1618 684 0 0 0 chrX 135476475 135476551 -31173745 + (AATAG)n Simple_repeat Simple_repeat 5 80 0 7 1618 218 118 84 42 chrX 135476664 135476735 -31173561 + (CATATA)n Simple_repeat Simple_repeat 6 79 0 7 1618 22 35 0 0 chrX 135476952 135476981 -31173315 + AT_rich Low_complexity Low_complexity 1 29 0 7 1618 414 0 0 0 chrX 135477039 135477085 -31173211 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 7 1618 186 106 20 41 chrX 135477439 135477488 -31172808 + (TATAA)n Simple_repeat Simple_repeat 1 48 0 7 1618 310 247 32 0 chrX 135477510 135477603 -31172693 + L1ME1 LINE L1 6072 6167 -12 7 1618 231 301 50 70 chrX 135477656 135477756 -31172540 + PB1D7 SINE Alu 7 104 -16 7 1618 726 287 176 22 chrX 135477759 135478169 -31172127 + Lx9 LINE L1 7143 7615 -29 7 1618 310 314 23 55 chrX 135478271 135478399 -31171897 + PB1 SINE Alu 1 124 -3 7 1618 2056 95 17 3 chrX 135479486 135479782 -31170514 + MTB LTR MaLR 101 400 0 7 1618 266 333 130 0 chrX 135480167 135480290 -31170006 + B1F SINE Alu 6 144 -5 7 1618 21 0 0 0 chrX 135481825 135481846 -31168450 + AT_rich Low_complexity Low_complexity 1 21 0 7 1618 217 184 41 0 chrX 135482373 135482422 -31167874 + CT-rich Low_complexity Low_complexity 1 51 0 7 1618 321 364 54 27 chrX 135483857 135484117 -31166179 + L1M5 LINE L1 2666 2932 -3214 7 1618 857 142 7 0 chrX 135485273 135485428 -31164868 + (GAAA)n Simple_repeat Simple_repeat 2 157 0 7 1618 4263 57 18 4 chrX 135485437 135485981 -31164315 + L1Md_F2 LINE L1 6012 6563 -19 7 1618 270 0 0 0 chrX 135486276 135486306 -31163990 + (TC)n Simple_repeat Simple_repeat 2 31 0 7 1618 722 251 5 48 chrX 135486315 135486503 -31163793 - B3A SINE B2 -16 182 3 7 1618 21 0 0 0 chrX 135487705 135487726 -31162570 + AT_rich Low_complexity Low_complexity 1 21 0 7 1618 707 120 0 8 chrX 135488185 135488303 -31161993 + (GGA)n Simple_repeat Simple_repeat 2 118 0 7 1618 25 0 0 0 chrX 135490750 135490775 -31159521 + AT_rich Low_complexity Low_complexity 1 25 0 7 1618 376 279 94 25 chrX 135491208 135491410 -31158886 + L1MD3 LINE L1 7427 7642 -353 7 1618 22 70 0 0 chrX 135492265 135492308 -31157988 + AT_rich Low_complexity Low_complexity 1 43 0 7 1618 22 56 0 0 chrX 135495012 135495048 -31155248 + AT_rich Low_complexity Low_complexity 1 36 0 7 1618 275 327 26 26 chrX 135496015 135496128 -31154168 + L2 LINE L2 2282 2394 -1025 7 1618 664 250 60 13 chrX 135496594 135496829 -31153467 + L1M4 LINE L1 4992 5237 -909 7 1618 678 85 0 0 chrX 135496829 135496923 -31153373 + (TA)n Simple_repeat Simple_repeat 2 95 0 7 1618 189 0 0 0 chrX 135496923 135496943 -31153353 + (TG)n Simple_repeat Simple_repeat 2 22 0 7 1618 252 0 0 0 chrX 135496954 135496982 -31153314 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 1618 254 306 185 9 chrX 135497050 135497261 -31153035 + L1M4 LINE L1 5478 5725 -449 7 1618 180 242 77 46 chrX 135497595 135497660 -31152636 - MER5A DNA MER1_type -122 67 1 7 1618 398 335 42 30 chrX 135498663 135498829 -31151467 - MER5A DNA MER1_type -9 180 13 7 1618 485 341 88 4 chrX 135500107 135500334 -31149962 + MIR SINE MIR 15 260 -2 1 1618 616 239 21 139 chrX 135502392 135502630 -31147666 - B3 SINE B2 -6 210 1 2 1618 338 250 124 10 chrX 135502913 135503010 -31147286 + B1F SINE Alu 2 109 -40 3 1618 22 0 0 0 chrX 135503147 135503169 -31147127 + AT_rich Low_complexity Low_complexity 1 22 0 4 1618 303 96 0 0 chrX 135503530 135503582 -31146714 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 5 1618 617 52 62 0 chrX 135503587 135503683 -31146613 - B1_Mur4 SINE Alu 0 150 49 6 1618 633 291 20 0 chrX 135504058 135504209 -31146087 - RSINE1 SINE B4 -10 155 2 7 1618 286 263 39 13 chrX 135504352 135504506 -31145790 + (TA)n Simple_repeat Simple_repeat 2 159 0 8 1618 261 309 46 0 chrX 135504506 135504619 -31145677 - MIR SINE MIR -84 184 61 9 1618 225 297 13 63 chrX 135505481 135505560 -31144736 - Tigger13a DNA MER2_type -282 489 415 1 1618 25 0 0 0 chrX 135506034 135506059 -31144237 + AT_rich Low_complexity Low_complexity 1 25 0 1 1618 219 311 0 0 chrX 135507667 135507728 -31142568 + B3A SINE B2 49 109 -89 1 1618 22 0 0 0 chrX 135508620 135508642 -31141654 + AT_rich Low_complexity Low_complexity 1 22 0 1 1618 243 0 0 0 chrX 135509349 135509376 -31140920 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1618 396 284 68 45 chrX 135511198 135511375 -31138921 + B3A SINE B2 1 181 -14 1 1618 498 326 126 0 chrX 135511501 135511676 -31138620 + B3 SINE B2 2 198 0 1 1618 345 265 75 50 chrX 135512913 135513072 -31137224 + Charlie4z DNA MER1_type 5 167 0 1 1618 26 0 0 0 chrX 135513163 135513189 -31137107 + AT_rich Low_complexity Low_complexity 1 26 0 1 1618 1461 291 122 35 chrX 135513345 135514195 -31136101 - Charlie1 DNA MER1_type -1 2780 1857 1 1618 393 115 416 5 chrX 135515183 135515293 -31135003 - B1_Mm SINE Alu -1 147 2 2 1618 462 79 0 0 chrX 135516126 135516189 -31134107 + (TA)n Simple_repeat Simple_repeat 1 63 0 2 1618 260 62 0 0 chrX 135516291 135516339 -31133957 - L1_Mus4 LINE L1 0 6636 6589 2 1618 492 350 0 27 chrX 135516567 135516714 -31133582 + RSINE1 SINE B4 1 143 -22 2 1618 180 0 0 0 chrX 135516738 135516758 -31133538 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 1618 192 40 0 0 chrX 135517211 135517236 -31133060 + (CAG)n Simple_repeat Simple_repeat 1 25 0 2 1618 629 295 56 15 chrX 135518567 135518763 -31131533 + B3 SINE B2 2 205 -11 2 1618 392 235 12 0 chrX 135518916 135518997 -31131299 + ID4_ SINE ID 1 82 -1 2 1618 221 333 0 0 chrX 135519849 135519966 -31130330 + (ATG)n Simple_repeat Simple_repeat 3 119 0 2 1618 26 0 0 0 chrX 135520247 135520273 -31130023 + AT_rich Low_complexity Low_complexity 1 26 0 2 1618 405 0 0 0 chrX 135521085 135521130 -31129166 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1618 375 198 21 42 chrX 135522202 135522297 -31127999 - L1MA5A LINE L1 -465 5832 5740 3 1618 186 43 0 0 chrX 135522483 135522506 -31127790 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 3 1618 284 296 96 75 chrX 135522614 135522760 -31127536 - B1F SINE Alu 0 149 1 3 1618 327 322 52 26 chrX 135522852 135523005 -31127291 + MIRb SINE MIR 73 229 -39 3 1618 195 100 0 0 chrX 135523128 135523158 -31127138 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 1618 268 293 120 0 chrX 135523528 135523603 -31126693 + RSINE1 SINE B4 18 101 -64 3 1618 1115 70 0 0 chrX 135523964 135524106 -31126190 - L1Md_F2 LINE L1 -245 6337 6196 3 1618 1477 101 35 0 chrX 135524108 135524335 -31125961 + L1Md_F2 LINE L1 6348 6582 0 3 1618 186 71 0 0 chrX 135524654 135524682 -31125614 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 3 1618 306 236 265 17 chrX 135524683 135524864 -31125432 - Lx5 LINE L1 -13 7037 6812 3 1618 295 276 108 29 chrX 135526153 135526400 -31123896 + L1MA6 LINE L1 5751 6015 -285 4 1618 746 151 135 72 chrX 135527245 135527452 -31122844 - RMER10A LTR ERVL 0 442 223 4 1618 417 283 0 10 chrX 135527665 135527765 -31122531 + B1_Mm SINE Alu 2 100 -47 4 1618 674 174 101 0 chrX 135527926 135528104 -31122192 + Lx9 LINE L1 7448 7643 -1 4 1618 577 274 109 26 chrX 135528118 135528421 -31121875 + L1MA6 LINE L1 5947 6274 -26 4 1619 383 0 21 0 chrX 135529530 135529577 -31120719 + (TTA)n Simple_repeat Simple_repeat 1 48 0 4 1619 2016 70 0 0 chrX 135529577 135529834 -31120462 - L1_Mus1 LINE L1 -10 6557 6301 4 1619 751 249 48 66 chrX 135529862 135530197 -31120099 - L1M4 LINE L1 -947 5199 4871 4 1619 409 204 86 50 chrX 135531279 135531418 -31118878 - MER5A DNA MER1_type -19 170 27 4 1619 435 345 0 7 chrX 135533759 135533899 -31116397 + ID_B1 SINE B4 85 223 -1 4 1619 384 119 0 0 chrX 135535581 135535640 -31114656 + (A)n Simple_repeat Simple_repeat 1 59 0 4 1619 588 143 0 0 chrX 135535946 135536072 -31114224 + (TC)n Simple_repeat Simple_repeat 1 126 0 5 1619 387 0 0 0 chrX 135536072 135536115 -31114181 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1619 228 250 31 0 chrX 135536557 135536621 -31113675 + ID4_ SINE ID 16 81 -2 5 1619 578 269 90 38 chrX 135539240 135539402 -31110894 - L1M2 LINE L1 -529 5771 5592 5 1619 243 88 0 0 chrX 135539402 135539436 -31110860 + (TCTG)n Simple_repeat Simple_repeat 4 37 0 5 1619 578 269 90 38 chrX 135539436 135539540 -31110756 - L1M2 LINE L1 -709 5591 5492 5 1619 240 304 107 77 chrX 135539604 135539800 -31110496 - MIRb SINE MIR -14 254 53 5 1619 205 299 39 13 chrX 135539957 135540035 -31110261 + MIRc SINE MIR 13 92 -176 5 1619 276 247 0 27 chrX 135540075 135540150 -31110146 - ID4_ SINE ID -9 74 2 5 1619 820 294 19 42 chrX 135540668 135541009 -31109287 - Lx9 LINE L1 -195 7449 7121 5 1619 569 248 126 69 chrX 135541079 135541326 -31108970 + Lx8 LINE L1 7196 7456 -17 5 1619 27 73 0 0 chrX 135542549 135542604 -31107692 + AT_rich Low_complexity Low_complexity 1 55 0 6 1619 435 317 52 21 chrX 135544465 135544690 -31105606 + B4 SINE B4 4 271 -21 6 1619 251 146 0 18 chrX 135544692 135544748 -31105548 + CT-rich Low_complexity Low_complexity 3 57 0 6 1619 429 66 0 0 chrX 135544784 135544845 -31105451 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 1619 198 302 59 59 chrX 135545847 135545949 -31104347 - MIR SINE MIR -130 132 31 6 1619 742 294 104 24 chrX 135546107 135546358 -31103938 + B4A SINE B4 2 272 -20 6 1619 180 259 134 87 chrX 135546504 135546631 -31103665 - L3 LINE CR1 -2322 2167 2035 6 1619 187 192 0 71 chrX 135546598 135546654 -31103642 + L3 LINE CR1 730 781 -3708 6 1619 442 294 23 23 chrX 135547216 135547345 -31102951 - RSINE1 SINE B4 -36 129 1 6 1619 641 230 63 21 chrX 135547352 135547494 -31102802 - B1_Mur2 SINE Alu 0 149 2 6 1619 287 265 26 121 chrX 135547393 135547509 -31102787 - MT2B LTR ERVL -341 260 156 7 1619 621 124 0 0 chrX 135547509 135547606 -31102690 + (TTTC)n Simple_repeat Simple_repeat 1 97 0 7 1619 45 0 0 0 chrX 135547608 135547653 -31102643 + AT_rich Low_complexity Low_complexity 1 45 0 7 1619 561 218 16 49 chrX 135547655 135547838 -31102458 - Lx7 LINE L1 -36 7660 7484 7 1619 877 107 29 0 chrX 135548078 135548218 -31102078 + URR1A DNA MER1_type 81 224 -2 7 1619 384 310 61 71 chrX 135548239 135548451 -31101845 - Lx8 LINE L1 -341 7132 6923 7 1619 489 247 52 69 chrX 135548451 135548625 -31101671 - RMER15-int LTR ERVL -130 4869 4699 7 1619 1699 221 155 39 chrX 135548627 135549117 -31101179 - RMER12 LTR ERVK -2 1320 774 7 1619 542 15 15 0 chrX 135549703 135549770 -31100526 + (TC)n Simple_repeat Simple_repeat 2 69 0 7 1619 344 22 22 0 chrX 135549938 135549983 -31100313 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1619 363 358 67 0 chrX 135550285 135550419 -31099877 - ID_B1 SINE B4 -1 223 81 8 1619 41 0 0 0 chrX 135551705 135551746 -31098550 + AT_rich Low_complexity Low_complexity 1 41 0 8 1619 229 254 34 0 chrX 135551804 135551863 -31098433 + MER20 DNA MER1_type 23 83 -136 8 1619 1017 72 0 41 chrX 135551990 135552135 -31098161 - B1_Mus1 SINE Alu 0 148 10 8 1619 627 251 5 134 chrX 135551995 135552211 -31098085 - ID_B1 SINE B4 -2 222 35 8 1619 6250 35 0 0 chrX 135552303 135553040 -31097256 + L1Md_T LINE L1 5846 6582 0 8 1619 200 200 0 20 chrX 135553138 135553189 -31097107 + GA-rich Low_complexity Low_complexity 6 55 0 8 1619 1021 272 150 45 chrX 135553351 135553770 -31096526 + RMER13A LTR ERVK 398 860 0 8 1619 1221 122 0 21 chrX 135553958 135554150 -31096146 + B2_Mm2 SINE B2 1 188 -7 8 1619 211 138 52 0 chrX 135554182 135554240 -31096056 + (TTATA)n Simple_repeat Simple_repeat 4 64 0 8 1619 559 228 51 14 chrX 135554307 135554445 -31095851 - B1_Mur2 SINE Alu -5 144 2 9 1619 317 263 62 16 chrX 135554621 135554814 -31095482 - L1MCa LINE L1 -3138 3183 2982 9 1619 550 306 52 26 chrX 135554864 135555169 -31095127 - L1MCa LINE L1 -3498 2823 2511 9 1619 387 0 0 0 chrX 135555719 135555762 -31094534 + (CA)n Simple_repeat Simple_repeat 1 43 0 9 1619 399 356 8 0 chrX 135555867 135555985 -31094311 + PB1 SINE Alu 1 119 -8 9 1619 6217 36 5 1 chrX 135556105 135556847 -31093449 + L1Md_F2 LINE L1 5836 6580 -2 9 1619 317 286 36 24 chrX 135557129 135557294 -31093002 - L1MCa LINE L1 -4616 1892 1726 9 1619 1329 136 32 9 chrX 135557314 135557530 -31092766 - URR1B DNA MER1_type 0 225 5 9 1619 241 211 19 37 chrX 135557585 135557639 -31092657 - RLTR9E LTR ERVK -109 300 248 9 1619 248 303 13 0 chrX 135557671 135557747 -31092549 - ID4_ SINE ID -6 77 1 9 1619 362 338 72 0 chrX 135557748 135557887 -31092409 - B1_Mur4 SINE Alu 0 150 2 9 1619 4557 140 20 7 chrX 135557961 135558768 -31091528 - Lx4B LINE L1 -119 5758 4942 9 1619 5667 175 63 13 chrX 135558765 135559984 -31090312 + Lx4B LINE L1 5762 7041 -17 9 1619 804 158 42 32 chrX 135560113 135560287 -31090009 + B3 SINE B2 3 190 -3 1 1619 1019 262 10 35 chrX 135560337 135560650 -31089646 + Lx7 LINE L1 6976 7280 -416 1 1619 797 145 14 0 chrX 135560698 135560843 -31089453 + CT-rich Low_complexity Low_complexity 2 148 0 1 1619 180 0 0 0 chrX 135560841 135560861 -31089435 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1 1619 227 75 75 0 chrX 135560959 135560999 -31089297 + (GGGAGA)n Simple_repeat Simple_repeat 1 43 0 1 1619 22 0 0 0 chrX 135561065 135561087 -31089209 + AT_rich Low_complexity Low_complexity 1 22 0 1 1619 452 62 16 0 chrX 135561115 135561179 -31089117 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 1619 281 26 0 26 chrX 135561622 135561661 -31088635 + (TTA)n Simple_repeat Simple_repeat 3 40 0 1 1619 345 75 0 0 chrX 135561838 135561891 -31088405 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1619 288 0 0 0 chrX 135561933 135561965 -31088331 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1619 734 251 25 42 chrX 135561973 135562214 -31088082 - L1MB1 LINE L1 -97 6071 5835 1 1619 548 342 47 31 chrX 135562263 135562677 -31087619 - L2a LINE L2 -243 3183 2767 1 1619 430 341 38 38 chrX 135563049 135563235 -31087061 + MER58A DNA MER1_type 6 191 -33 1 1619 375 272 0 34 chrX 135563252 135563370 -31086926 + L1M5 LINE L1 3102 3215 -2931 1 1619 249 304 51 0 chrX 135563514 135563593 -31086703 + MLT2C1 LTR ERVL 11 93 -304 1 1619 482 349 13 13 chrX 135563640 135563794 -31086502 - RSINE1 SINE B4 -11 154 1 1 1619 1404 216 82 40 chrX 135563865 135564266 -31086030 - MTD LTR MaLR 0 419 2 1 1619 326 219 81 14 chrX 135564314 135564388 -31085908 - B4A SINE B4 -208 84 6 1 1619 222 246 0 0 chrX 135564436 135564497 -31085799 + (CACG)n Simple_repeat Simple_repeat 2 62 0 1 1619 229 145 16 16 chrX 135564693 135564756 -31085540 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 1619 400 266 37 73 chrX 135564760 135565032 -31085264 + L1MB2 LINE L1 5906 6167 -4 1 1619 816 272 133 49 chrX 135565226 135565863 -31084433 + L1MC2 LINE L1 5542 6232 -112 1 1619 248 325 0 0 chrX 135565912 135565992 -31084304 - ID4 SINE ID -3 80 1 1 1619 2096 284 112 13 chrX 135566085 135566910 -31083386 + Lx8 LINE L1 6395 7300 -173 1 1619 465 19 0 0 chrX 135566957 135567011 -31083285 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 1619 596 323 20 14 chrX 135567208 135567500 -31082796 + L1ME2 LINE L1 5552 5845 -319 1 1619 882 338 28 33 chrX 135567523 135567915 -31082381 + MTD LTR MaLR 30 419 0 1 1619 745 344 45 43 chrX 135567969 135568223 -31082073 - LTR53 LTR ERVL -33 486 232 1 1619 237 33 0 0 chrX 135568223 135568253 -31082043 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 1619 745 344 45 43 chrX 135568253 135568417 -31081879 - LTR53 LTR ERVL -288 231 67 1 1619 264 296 44 15 chrX 135568572 135568709 -31081587 + L1ME2 LINE L1 6008 6148 -14 1 1619 828 111 73 81 chrX 135568861 135569079 -31081217 + L1_Mus2 LINE L1 6298 6534 -104 1 1619 3089 55 18 0 chrX 135569865 135570264 -31080032 - L1Md_F2 LINE L1 -1 6581 6176 1 1619 656 307 15 29 chrX 135570467 135570672 -31079624 + B3 SINE B2 1 202 -14 1 1619 1499 193 33 57 chrX 135570676 135571065 -31079231 - ORR1C2 LTR MaLR -4 380 1 1 1619 1735 234 105 22 chrX 135571094 135571600 -31078696 + ORR1B1-int LTR MaLR 75 622 -887 1 1619 2421 196 121 19 chrX 135571661 135572182 -31078114 - RMER19A LTR ERVK 0 737 164 1 1619 1959 234 95 16 chrX 135572167 135572663 -31077633 + ORR1B1-int LTR MaLR 809 1343 -166 1 1619 695 335 48 72 chrX 135572672 135572896 -31077400 + B4A SINE B4 4 229 -63 1 1619 412 221 98 38 chrX 135572896 135573028 -31077268 + B1_Mur2 SINE Alu 1 140 -9 1 1619 186 43 0 0 chrX 135573029 135573052 -31077244 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 1 1619 695 335 48 72 chrX 135573052 135573118 -31077178 + B4A SINE B4 230 289 -3 1 1619 222 356 14 0 chrX 135573735 135573808 -31076488 - MIRm SINE MIR -162 114 41 1 1619 464 0 0 18 chrX 135574174 135574231 -31076065 + (GA)n Simple_repeat Simple_repeat 2 57 0 1 1619 7754 35 28 0 chrX 135574298 135575309 -31074987 - L1Md_F2 LINE L1 -2 6580 5572 1 1619 503 318 13 7 chrX 135575377 135575526 -31074770 - Lx9 LINE L1 -139 7334 7185 1 1619 270 266 10 69 chrX 135575997 135576098 -31074198 + MIR SINE MIR 92 186 -76 1 1619 231 344 84 46 chrX 135576572 135576703 -31073593 - MLT1J2 LTR MaLR -126 322 187 1 1619 384 22 0 0 chrX 135577071 135577116 -31073180 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1619 409 253 32 0 chrX 135577158 135577253 -31073043 - B4A SINE B4 -6 286 189 1 1619 339 382 16 0 chrX 135577274 135577397 -31072899 - B4A SINE B4 -166 126 2 1 1619 863 167 0 32 chrX 135577702 135577888 -31072408 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1619 571 259 48 5 chrX 135577889 135578072 -31072224 - Lx9 LINE L1 -594 7050 6782 1 1619 246 171 0 0 chrX 135578152 135578193 -31072103 - Lx9 LINE L1 -724 6920 6880 1 1619 16188 92 9 9 chrX 135578252 135580049 -31070247 - L1_Mus2 LINE L1 -2 6564 4732 1 1619 222 62 0 0 chrX 135580049 135580081 -31070215 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 1619 16188 112 18 19 chrX 135580081 135581644 -31068652 - L1_Mus2 LINE L1 -1152 4731 3204 1 1619 1148 82 0 0 chrX 135581719 135581865 -31068431 - B1_Mus1 SINE Alu -1 147 2 1 1619 500 274 67 15 chrX 135581866 135582133 -31068163 - L1M4 LINE L1 -1584 5060 4780 1 1619 31 26 0 0 chrX 135582463 135582501 -31067795 + AT_rich Low_complexity Low_complexity 1 38 0 1 1619 236 344 48 27 chrX 135582689 135583060 -31067236 - L1M4 LINE L1 -4710 1936 1558 1 1619 420 284 60 25 chrX 135583282 135583567 -31066729 - L1M4 LINE L1 -5302 1240 946 1 1619 259 350 24 32 chrX 135583569 135583693 -31066603 - ORR1D2 LTR MaLR -8 371 249 1 1619 526 331 18 24 chrX 135583789 135583956 -31066340 - ORR1D2 LTR MaLR -187 183 18 1 1619 714 120 0 0 chrX 135584192 135584317 -31065979 + (TG)n Simple_repeat Simple_repeat 2 126 0 1 1619 1147 94 6 0 chrX 135584705 135584876 -31065420 - L1_Mus3 LINE L1 -188 6450 6279 1 1619 2532 83 8 3 chrX 135585032 135585384 -31064912 - L1_Mus3 LINE L1 -6 6632 6279 1 1619 282 87 0 0 chrX 135585398 135585444 -31064852 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 1 1619 1174 63 0 0 chrX 135585449 135585591 -31064705 - B1_Mus2 SINE Alu -5 142 1 1 1619 1779 236 48 11 chrX 135585672 135586075 -31064221 + MTD LTR MaLR 1 404 -15 1 1619 2492 233 179 68 chrX 135586075 135587207 -31063089 + MTD-int LTR MaLR 1 1258 0 1 1619 433 229 41 10 chrX 135587227 135587324 -31062972 + MTD LTR MaLR 3 102 -317 1 1619 206 62 0 30 chrX 135587593 135587626 -31062670 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1 1619 878 260 62 100 chrX 135587646 135587937 -31062359 + B4 SINE B4 10 289 -3 1 1619 612 318 138 24 chrX 135588149 135588600 -31061696 - MLT1D LTR MaLR -3 502 1 1 1619 203 298 55 16 chrX 135588687 135588819 -31061477 + MIRb SINE MIR 125 262 0 1 1619 573 287 63 60 chrX 135588905 135589239 -31061057 - Charlie7 DNA MER1_type -1971 641 307 1 1619 572 81 23 0 chrX 135589630 135589716 -31060580 + (TTTTC)n Simple_repeat Simple_repeat 3 90 0 1 1619 417 39 0 0 chrX 135589729 135589780 -31060516 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 1619 953 140 0 14 chrX 135589780 135589925 -31060371 - B2_Mm2 SINE B2 -51 144 2 1 1619 438 339 16 27 chrX 135590850 135591035 -31059261 + RMER15 LTR ERVL 337 519 -56 1 1619 3507 36 0 2 chrX 135591273 135591694 -31058602 - L1Md_T LINE L1 0 6582 6163 1 1619 292 330 9 37 chrX 135591776 135591883 -31058413 + RMER15-int LTR ERVL 1738 1841 -3158 1 1619 451 399 0 0 chrX 135592034 135592182 -31058114 + RSINE1 SINE B4 6 153 -12 1 1619 204 179 0 0 chrX 135592188 135592227 -31058069 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1619 227 266 29 97 chrX 135592249 135592424 -31057872 - RLTR21 LTR ERVK -332 1240 1078 1 1619 840 208 43 5 chrX 135592487 135592695 -31057601 - Lx2B LINE L1 -4 6996 6781 1 1619 1480 317 36 87 chrX 135592818 135593136 -31057160 + Lx8 LINE L1 6212 6519 -954 1 1619 3823 146 50 5 chrX 135593136 135593798 -31056498 - RLTR17 LTR ERVK 0 692 1 1 1619 1480 317 36 87 chrX 135593798 135594398 -31055898 + Lx8 LINE L1 6520 7083 -390 1 1619 654 274 55 36 chrX 135594568 135594788 -31055508 + RMER15 LTR ERVL 335 558 -17 1 1619 1223 61 0 0 chrX 135594908 135595055 -31055241 + B1_Mus1 SINE Alu 2 148 0 1 1619 180 0 0 0 chrX 135595056 135595076 -31055220 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1 1619 238 360 111 28 chrX 135595386 135595566 -31054730 - MLT2D LTR ERVL -17 397 203 1 1619 268 299 47 0 chrX 135595621 135595728 -31054568 - MLT2D LTR ERVL -302 112 1 1 1619 209 33 0 32 chrX 135596089 135596120 -31054176 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 1619 225 0 0 0 chrX 135596203 135596228 -31054068 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1619 432 146 109 0 chrX 135596841 135596951 -31053345 - Lx9 LINE L1 -1 7643 7522 1 1619 216 0 0 0 chrX 135596955 135596979 -31053317 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1619 387 105 0 0 chrX 135596980 135597037 -31053259 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 1619 4663 211 36 4 chrX 135597037 135598077 -31052219 - Lx9 LINE L1 -188 7456 6383 1 1619 736 238 31 80 chrX 135598088 135598183 -31052113 - L1_Rod LINE L1 -2189 3658 3577 1 1619 234 0 0 0 chrX 135598183 135598209 -31052087 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1619 736 238 31 80 chrX 135598209 135598437 -31051859 - L1_Rod LINE L1 -2271 3576 3351 1 1619 829 291 60 45 chrX 135598534 135598869 -31051427 - MT2A LTR ERVL 0 533 194 1 1619 232 367 0 135 chrX 135599014 135599140 -31051156 - MTEa LTR MaLR -270 109 1 1 1619 272 155 0 53 chrX 135599154 135599229 -31051067 - Lx9 LINE L1 -2 7642 7572 1 1619 329 320 88 24 chrX 135599483 135599688 -31050608 - L1ME3B LINE L1 -372 5868 5651 1 1619 310 279 53 35 chrX 135600550 135600652 -31049644 - Lx7 LINE L1 -12 7684 7584 1 1619 309 68 0 0 chrX 135600652 135600696 -31049600 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 1 1619 310 279 53 35 chrX 135600696 135600764 -31049532 - Lx7 LINE L1 -113 7583 7511 1 1619 678 270 88 40 chrX 135600734 135601008 -31049288 - Lx7 LINE L1 -345 7351 7065 1 1619 312 237 51 9 chrX 135601239 135601346 -31048950 + ORR1E LTR MaLR 264 379 0 1 1619 708 281 6 0 chrX 135601884 135602051 -31048245 + ORR1D1 LTR MaLR 9 176 -198 1 1619 324 167 0 0 chrX 135602040 135602094 -31048202 + ORR1D1 LTR MaLR 305 358 -12 1 1619 462 340 50 6 chrX 135602198 135602358 -31047938 - LTR52 LTR ERVL -253 168 2 1 1619 1735 56 5 0 chrX 135602492 135602707 -31047589 + L1_Mus1 LINE L1 6352 6567 0 1 1619 226 210 0 31 chrX 135602790 135602807 -31047489 + (TA)n Simple_repeat Simple_repeat 1 17 0 1 1619 410 96 0 14 chrX 135602807 135602881 -31047415 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 1 1619 226 210 0 31 chrX 135602881 135602927 -31047369 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 1619 192 77 0 0 chrX 135602928 135602954 -31047342 + (CATA)n Simple_repeat Simple_repeat 3 28 0 1 1619 606 327 31 59 chrX 135603187 135603473 -31046823 + MLT1A0 LTR MaLR 28 305 -60 2 1619 2509 207 36 44 chrX 135603492 135604125 -31046171 + Lx2B LINE L1 6281 7023 -35 2 1619 433 217 8 17 chrX 135604161 135604278 -31046018 + Lx2B LINE L1 6866 6981 -19 2 1619 239 250 14 14 chrX 135604305 135604378 -31045918 + MLT1A0 LTR MaLR 293 365 0 2 1619 375 273 6 0 chrX 135604446 135604534 -31045762 - ID4 SINE ID -47 105 16 2 1619 227 259 168 0 chrX 135604554 135604697 -31045599 - L1MB1 LINE L1 -30 6159 5993 2 1619 7491 119 57 2 chrX 135604692 135605719 -31044577 - L1_Mus4 LINE L1 -255 6381 5304 2 1619 1056 68 7 40 chrX 135605719 135605871 -31044425 - B1_Mm SINE Alu 0 147 1 2 1619 7491 159 23 9 chrX 135605871 135606719 -31043577 - L1_Mus4 LINE L1 -580 5303 4446 2 1619 11665 71 10 10 chrX 135606713 135608452 -31041844 - L1VL2 LINE L1 -676 2939 1201 2 1619 8537 7 0 1 chrX 135608452 135609449 -31040847 - L1Md_T LINE L1 0 6582 5587 2 1619 5088 123 44 2 chrX 135609464 135610632 -31039664 - L1VL2 LINE L1 -2398 1217 112 2 1619 3426 96 6 2 chrX 135610854 135611324 -31038972 - L1_Mus3 LINE L1 -4 6634 6163 2 1619 227 236 0 0 chrX 135611325 135611380 -31038916 + L1VL1 LINE L1 346 400 -6022 2 1619 251 155 52 0 chrX 135611351 135611409 -31038887 + L1VL2 LINE L1 49 109 -6226 2 1619 418 259 133 1 chrX 135611433 135611567 -31038729 - MTD LTR MaLR -14 405 239 2 1619 2960 58 20 0 chrX 135611567 135611961 -31038335 - L1_Mus4 LINE L1 -475 6161 5760 2 1619 722 170 78 0 chrX 135611961 135612102 -31038194 + ORR1E-int LTR MaLR 1219 1370 0 2 1619 1148 293 31 48 chrX 135612102 135612460 -31037836 + ORR1E LTR MaLR 1 352 -7 2 1619 180 77 0 0 chrX 135612460 135612486 -31037810 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 1619 2014 311 63 20 chrX 135612546 135613457 -31036839 - Lx9 LINE L1 -234 7410 6461 2 1619 282 304 29 19 chrX 135613501 135613605 -31036691 - MIR SINE MIR -101 161 57 2 1619 198 366 12 0 chrX 135613664 135613746 -31036550 + MIR3 SINE MIR 98 180 -28 2 1619 870 249 0 47 chrX 135615334 135615549 -31034747 - B3 SINE B2 -11 205 1 2 1619 208 244 0 0 chrX 135617249 135617290 -31033006 + MIRm SINE MIR 222 262 -14 2 1619 190 333 13 40 chrX 135619049 135619124 -31031172 + L2 LINE L2 20 92 -3327 2 1619 951 110 23 0 chrX 135621035 135621208 -31029088 + (CATA)n Simple_repeat Simple_repeat 4 180 0 2 1619 244 269 30 40 chrX 135621208 135621293 -31029003 + B1F1 SINE Alu 37 118 -2 2 1619 4394 135 33 49 chrX 135621656 135622414 -31027882 - Lx3B LINE L1 0 6973 6228 2 1619 25 31 0 0 chrX 135622580 135622612 -31027684 + AT_rich Low_complexity Low_complexity 1 32 0 2 1619 219 36 0 0 chrX 135622930 135622958 -31027338 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 1619 533 250 73 68 chrX 135623215 135623267 -31027029 + MTE2a LTR MaLR 154 211 -168 2 1619 369 0 0 0 chrX 135623267 135623308 -31026988 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1619 3640 72 2 2 chrX 135623308 135623782 -31026514 - L1_Mus2 LINE L1 -3 6563 6090 2 1619 533 250 73 68 chrX 135623782 135623934 -31026362 + MTE2a LTR MaLR 212 359 -20 2 1619 365 329 102 23 chrX 135623953 135624345 -31025951 + ERVL-int LTR ERVL 4442 4932 -829 2 1619 21 0 0 0 chrX 135624765 135624786 -31025510 + AT_rich Low_complexity Low_complexity 1 21 0 2 1619 457 315 8 0 chrX 135624874 135624999 -31025297 - MLT1A0 LTR MaLR -3 362 237 2 1619 394 253 52 64 chrX 135624999 135625172 -31025124 - MTE2a LTR MaLR 0 379 209 2 1619 505 341 49 36 chrX 135626676 135626901 -31023395 - B4A SINE B4 -63 229 2 2 1619 428 299 34 0 chrX 135627345 135627462 -31022834 - B1F2 SINE Alu -28 121 1 2 1619 241 333 51 51 chrX 135627383 135627481 -31022815 - B4A SINE B4 -125 167 70 2 1619 347 356 27 7 chrX 135628204 135628351 -31021945 + MER5A DNA MER1_type 39 188 -1 2 1619 350 294 65 22 chrX 135628789 135628928 -31021368 - MLT1C LTR MaLR -32 435 291 2 1619 498 279 15 7 chrX 135629302 135629439 -31020857 + RMER15 LTR ERVL 422 559 -16 2 1619 24 85 0 0 chrX 135629798 135629857 -31020439 + AT_rich Low_complexity Low_complexity 1 59 0 2 1619 3999 28 0 15 chrX 135629896 135630375 -31019921 - L1Md_F2 LINE L1 -2 6580 6109 2 1619 1038 105 0 14 chrX 135630768 135630913 -31019383 + B1_Mus1 SINE Alu 1 143 -5 2 1619 1062 70 6 13 chrX 135630914 135631073 -31019223 + (GGAA)n Simple_repeat Simple_repeat 3 160 0 2 1619 1554 196 71 0 chrX 135632922 135633233 -31017063 + RMER4B LTR ERVK 1 333 -252 2 1619 18208 58 1 2 chrX 135633233 135635462 -31014834 + L1VL4 LINE L1 1100 3326 -2557 2 1619 945 27 0 0 chrX 135635462 135635574 -31014722 + (GGGAA)n Simple_repeat Simple_repeat 4 115 0 2 1619 18208 153 4 150 chrX 135635574 135638703 -31011593 + L1VL4 LINE L1 3327 5589 -297 2 1619 8188 42 0 15 chrX 135638703 135639716 -31010580 + L1Md_F3 LINE L1 5587 6584 0 2 1619 1019 169 192 5 chrX 135639718 135639932 -31010364 + RMER4B LTR ERVK 332 585 0 2 1619 2076 307 20 24 chrX 135640061 135640808 -31009488 + Lx9 LINE L1 6443 7186 -458 2 1619 618 319 39 7 chrX 135641321 135641627 -31008669 + Lx9 LINE L1 7178 7493 -151 2 1619 229 279 22 44 chrX 135642342 135642432 -31007864 + MTE2b LTR MaLR 288 375 -4 2 1619 362 339 55 55 chrX 135642638 135642838 -31007458 + MER115 DNA Tip100 359 558 -135 2 1619 2166 36 0 14 chrX 135642843 135643122 -31007174 + L1Md_F2 LINE L1 5312 5586 -297 2 1619 8002 48 2 1 chrX 135643123 135644103 -31006193 + L1Md_F2 LINE L1 5588 6568 -14 2 1619 239 29 57 0 chrX 135644612 135644647 -31005649 + (GGGGA)n Simple_repeat Simple_repeat 4 40 0 2 1619 304 288 16 83 chrX 135645547 135645668 -31004628 + MER115 DNA Tip100 577 689 -4 2 1619 1615 200 39 36 chrX 135645984 135646347 -31003949 + ORR1D2 LTR MaLR 5 368 -2 2 1619 655 334 18 49 chrX 135646698 135647005 -31003291 - B4 SINE B4 0 292 1 2 1619 296 372 87 0 chrX 135647006 135647224 -31003072 + L1M4b LINE L1 77 313 -7021 2 1619 479 291 95 11 chrX 135648383 135648647 -31001649 + L1M4b LINE L1 740 1025 -6309 2 1619 404 336 67 18 chrX 135648680 135648965 -31001331 + L1M4b LINE L1 1120 1418 -5916 2 1619 247 351 78 26 chrX 135649032 135649225 -31001071 - LTR53 LTR ERVL -72 447 245 2 1619 226 308 0 33 chrX 135652135 135652256 -30998040 + Lx7 LINE L1 7578 7694 -2 2 1619 2112 308 34 18 chrX 135652724 135653598 -30996698 - Lx8 LINE L1 -186 7287 6400 2 1619 3277 80 0 11 chrX 135653598 135654040 -30996256 + L1Md_F2 LINE L1 6134 6570 -12 2 1619 551 254 107 15 chrX 135654221 135654417 -30995879 + B3 SINE B2 3 216 0 2 1619 279 0 0 0 chrX 135654655 135654686 -30995610 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1619 214 278 14 14 chrX 135654780 135654853 -30995443 + (CATA)n Simple_repeat Simple_repeat 1 73 0 2 1619 315 0 0 0 chrX 135654993 135655028 -30995268 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1619 252 0 0 0 chrX 135655028 135655055 -30995241 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 1619 291 324 0 29 chrX 135655090 135655230 -30995066 + L1M4b LINE L1 2670 2805 -4529 2 1619 26 30 0 0 chrX 135655369 135655402 -30994894 + AT_rich Low_complexity Low_complexity 1 33 0 2 1619 956 217 25 15 chrX 135655482 135655683 -30994613 + ORR1D1 LTR MaLR 1 203 -171 2 1619 551 351 4 27 chrX 135655724 135655982 -30994314 - Lx8 LINE L1 -117 7356 7105 2 1619 207 0 0 0 chrX 135656753 135656776 -30993520 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1619 2867 75 44 0 chrX 135656810 135657199 -30993097 - MTB_Mm LTR MaLR 0 407 2 2 1619 2025 138 6 58 chrX 135657290 135657637 -30992659 + ORR1A4 LTR MaLR 1 329 0 2 1619 8710 155 48 111 chrX 135657637 135659383 -30990913 + ORR1A4-int LTR MaLR 1 1670 -293 2 1619 306 20 39 19 chrX 135659383 135659435 -30990861 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 2 202 8710 155 48 111 chrX 135659435 135659782 -30990514 + ORR1A4-int LTR MaLR 1671 1963 0 2 1620 273 100 0 0 chrX 135659782 135659822 -30990474 + ORR1A4 LTR MaLR 1 40 -289 2 1620 683 81 20 0 chrX 135659821 135659920 -30990376 + ORR1A4 LTR MaLR 229 329 0 2 1620 8890 72 1 0 chrX 135660120 135661335 -30988961 + L1Md_F3 LINE L1 4370 5585 -298 2 1620 8382 32 0 3 chrX 135661336 135662337 -30987959 + L1Md_F3 LINE L1 5587 6584 0 2 1620 6477 41 4 6 chrX 135662329 135663131 -30987165 + L1Md_F2 LINE L1 5783 6582 0 2 1620 30 0 0 0 chrX 135663234 135663264 -30987032 + AT_rich Low_complexity Low_complexity 1 30 0 2 1620 6888 138 25 73 chrX 135663404 135663970 -30986326 - L1_Mm LINE L1 -139 5744 5270 2 1620 2814 111 5 7 chrX 135663970 135664398 -30985898 - L1_Mus3 LINE L1 -5 6633 6207 2 1620 6888 138 25 73 chrX 135664398 135665219 -30985077 - L1_Mm LINE L1 -614 5269 4424 2 1620 6158 87 30 2 chrX 135665215 135666106 -30984190 + L1_Mus4 LINE L1 5714 6629 -7 2 1620 258 245 58 10 chrX 135666476 135666579 -30983717 + L1M4b LINE L1 3017 3124 -4210 2 1620 609 341 14 0 chrX 135666590 135666804 -30983492 + ID_B1 SINE B4 1 217 -7 2 1620 205 172 15 15 chrX 135667227 135667292 -30983004 + GA-rich Low_complexity Low_complexity 2 66 0 2 1620 556 360 52 73 chrX 135667311 135667570 -30982726 + MER76 LTR ERVL 5 273 -418 2 1620 190 0 67 0 chrX 135667570 135667600 -30982696 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 1620 669 304 200 68 chrX 135667600 135667961 -30982335 + MER76 LTR ERVL 274 667 -24 2 1620 590 287 44 10 chrX 135669265 135669469 -30980827 + MER76-int LTR ERVL 3445 3655 -2534 2 1620 331 269 80 58 chrX 135669555 135669693 -30980603 - Lx8 LINE L1 -1070 6403 6263 2 1620 924 288 87 68 chrX 135669687 135670145 -30980151 + Lx8 LINE L1 6823 7289 -184 2 1620 654 173 60 8 chrX 135670392 135670526 -30979770 + B2_Mm1t SINE B2 52 192 -1 2 1620 29667 105 10 22 chrX 135670550 135676782 -30973514 + L1_Mus1 LINE L1 423 6654 0 2 1620 378 306 54 0 chrX 135676896 135677007 -30973289 + MER76 LTR ERVL 67 183 -508 2 1620 276 379 48 10 chrX 135677190 135677294 -30973002 + MER76 LTR ERVL 430 537 -154 2 1620 381 253 22 0 chrX 135677314 135677405 -30972891 + MER76 LTR ERVL 599 691 0 2 1620 351 271 96 0 chrX 135677498 135677697 -30972599 + L1M4b LINE L1 3410 3627 -3707 2 1620 1412 202 44 54 chrX 135678245 135678989 -30971307 + L1_Mur3 LINE L1 859 1603 -4277 2 1620 2459 170 34 72 chrX 135679295 135679935 -30970361 + L1_Mur3 LINE L1 1601 2216 -3664 2 1620 2132 144 132 19 chrX 135679930 135680363 -30969933 + L1_Mur2 LINE L1 539 1020 -6066 2 1620 7369 48 1 15 chrX 135680361 135681030 -30969266 - L1Md_F2 LINE L1 0 6582 5928 2 1620 4466 12 0 0 chrX 135681030 135681523 -30968773 + MT2_Mm LTR ERVL 1 493 0 2 1620 7369 48 1 15 chrX 135681523 135681838 -30968458 - L1Md_F2 LINE L1 -655 5927 5612 2 1620 19534 105 27 15 chrX 135681836 135681863 -30968433 + L1_Mur2 LINE L1 1518 1544 -4333 2 1620 189 0 0 0 chrX 135681863 135681884 -30968412 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2 1620 19534 105 27 15 chrX 135681884 135685180 -30965116 + L1_Mur2 LINE L1 1545 4880 -997 2 1620 952 84 0 0 chrX 135685180 135685322 -30964974 + L1_Mur2 LINE L1 3981 4122 -1755 2 1620 536 245 60 13 chrX 135685322 135685471 -30964825 + B4A SINE B4 132 287 -5 2 1620 10464 117 12 8 chrX 135685487 135686264 -30964032 + L1_Mm LINE L1 4123 4904 -979 2 1620 2446 135 23 5 chrX 135686264 135686659 -30963637 - RLTR9D LTR ERVK -1 402 1 2 1620 10464 117 12 8 chrX 135686659 135687599 -30962697 + L1_Mm LINE L1 4905 5846 -37 2 1620 3434 119 56 35 chrX 135687625 135688216 -30962080 + L1_Mus4 LINE L1 6026 6628 -8 2 1620 29 0 0 0 chrX 135688217 135688246 -30962050 + AT_rich Low_complexity Low_complexity 1 29 0 3 1620 5892 140 14 14 chrX 135688269 135689202 -30961094 + Lx4A LINE L1 6126 7058 0 3 1620 3515 168 41 24 chrX 135689226 135689255 -30961041 + Lx6 LINE L1 2209 2237 -3643 3 1620 1961 184 68 5 chrX 135689255 135689638 -30960658 + MTB_Mm LTR MaLR 1 407 0 3 1620 3515 168 41 24 chrX 135689638 135690394 -30959902 + Lx6 LINE L1 2238 3007 -2873 3 1620 30664 77 1 3 chrX 135690393 135695811 -30954485 + L1Md_F2 LINE L1 178 5586 -297 3 1620 7723 54 9 8 chrX 135695811 135696598 -30953698 + L1Md_F2 LINE L1 5587 6372 -210 3 1620 432 0 0 0 chrX 135696598 135696646 -30953650 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1620 7723 54 9 8 chrX 135696646 135696850 -30953446 + L1Md_F2 LINE L1 6373 6578 -4 3 1620 12048 162 27 30 chrX 135696851 135699446 -30950850 + Lx6 LINE L1 3001 5586 -294 3 1620 5352 238 80 15 chrX 135699443 135700217 -30950079 + Lx6 LINE L1 5908 6754 -706 3 1620 384 59 0 0 chrX 135700217 135700268 -30950028 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 3 1620 5352 238 80 15 chrX 135700268 135700941 -30949355 + Lx6 LINE L1 6755 7448 -12 3 1620 336 299 52 45 chrX 135700944 135701087 -30949209 + L1M4 LINE L1 2476 2620 -3526 3 1620 701 265 63 11 chrX 135701087 135701278 -30949018 + B3 SINE B2 1 201 -15 3 1620 774 302 42 23 chrX 135701345 135701820 -30948476 + L1M4 LINE L1 2629 3112 -3034 3 1620 276 343 119 37 chrX 135701854 135701963 -30948333 + B4 SINE B4 6 123 -169 3 1620 270 81 0 0 chrX 135701967 135702004 -30948292 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1620 2284 149 13 29 chrX 135702526 135702905 -30947391 + Lx4A LINE L1 6672 7044 -14 3 1620 312 27 0 0 chrX 135702906 135702943 -30947353 + (TAA)n Simple_repeat Simple_repeat 3 39 0 3 1620 6004 139 29 9 chrX 135703216 135705830 -30944466 + L1VL2 LINE L1 354 3865 -2021 3 1620 505 96 149 0 chrX 135705847 135705941 -30944355 + Lx LINE L1 6293 6400 -254 3 1620 3143 89 0 2 chrX 135705934 135706467 -30943829 - L1_Mus4 LINE L1 -613 6023 5492 3 1620 3487 138 65 0 chrX 135706469 135707042 -30943254 + Lx2 LINE L1 6388 6997 0 3 1620 23 68 0 0 chrX 135707461 135707505 -30942791 + AT_rich Low_complexity Low_complexity 1 44 0 3 1620 965 99 42 7 chrX 135708085 135708228 -30942068 - B1_Mus1 SINE Alu 0 148 1 3 1620 264 79 26 0 chrX 135708501 135708539 -30941757 + URR1B DNA MER1_type 187 225 0 3 1620 666 228 17 6 chrX 135708638 135708810 -30941486 + Lx9 LINE L1 7248 7421 -223 3 1620 281 77 0 0 chrX 135708992 135709031 -30941265 - L1_Mm LINE L1 -3413 2470 2432 3 1620 4330 51 3 0 chrX 135709031 135709597 -30940699 + L1Md_F2 LINE L1 5019 5586 -297 3 1620 8460 26 2 1 chrX 135709597 135710589 -30939707 + L1Md_F2 LINE L1 5587 6579 -3 3 1620 737 333 52 18 chrX 135710715 135711042 -30939254 - MLT1A0 LTR MaLR -19 346 9 3 1620 358 304 304 22 chrX 135711764 135712077 -30938219 - MLT1A1 LTR MaLR -7 401 1 3 1620 274 214 291 23 chrX 135712221 135712393 -30937903 - Lx9 LINE L1 -3 7641 7424 3 1620 288 208 0 14 chrX 135712392 135712465 -30937831 + Lx9 LINE L1 7305 7376 -268 3 1620 734 216 126 4 chrX 135713244 135713428 -30936868 - B3 SINE B2 0 198 1 3 1620 294 229 0 0 chrX 135714428 135714550 -30935746 + (ATG)n Simple_repeat Simple_repeat 3 124 0 3 1620 295 288 25 0 chrX 135715828 135715908 -30934388 + MER5A DNA MER1_type 30 111 -78 3 1620 536 165 9 0 chrX 135716249 135716364 -30933932 + (TA)n Simple_repeat Simple_repeat 1 116 0 3 1620 295 288 48 48 chrX 135717066 135717296 -30933000 + L1MA5 LINE L1 6048 6277 -23 3 1620 240 252 153 15 chrX 135717461 135717598 -30932698 - L1_Rod LINE L1 -3343 2504 2349 3 1620 5289 209 92 29 chrX 135717597 135719002 -30931294 + Lx7 LINE L1 5527 7014 -682 3 1620 1725 218 91 30 chrX 135719015 135719540 -30930756 + Lx7 LINE L1 7124 7680 -16 3 1620 397 268 41 0 chrX 135719543 135719666 -30930630 - L1_Rod LINE L1 -3576 2271 2144 3 1620 450 0 0 0 chrX 135719667 135719717 -30930579 + (TTA)n Simple_repeat Simple_repeat 3 52 0 3 1620 495 33 0 0 chrX 135719948 135720009 -30930287 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 3 1620 1361 265 104 18 chrX 135720019 135720548 -30929748 - Lx6 LINE L1 -225 7235 6567 3 1620 277 82 20 20 chrX 135720869 135720919 -30929377 + (TTTG)n Simple_repeat Simple_repeat 4 53 0 3 1620 665 252 0 0 chrX 135720919 135721062 -30929234 - ID_B1 SINE B4 0 224 82 3 1620 468 0 0 0 chrX 135721328 135721380 -30928916 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 1620 1334 102 32 0 chrX 135721463 135721650 -30928646 + B2_Mm2 SINE B2 2 194 -1 3 1620 21 0 0 0 chrX 135722511 135722532 -30927764 + AT_rich Low_complexity Low_complexity 1 21 0 3 1620 324 256 103 0 chrX 135722668 135722746 -30927550 + B1F SINE Alu 19 104 -45 3 1620 492 300 83 15 chrX 135722734 135722866 -30927430 + RSINE1 SINE B4 21 161 -4 3 1620 623 330 46 72 chrX 135723027 135723219 -30927077 - ERVL-E-int LTR ERVL -2570 3097 2905 3 1620 4142 64 2 0 chrX 135723219 135723747 -30926549 + L1_Mus1 LINE L1 6038 6566 -1 3 1620 623 330 46 72 chrX 135723747 135723985 -30926311 - ERVL-E-int LTR ERVL -2763 2904 2678 3 1620 980 259 150 14 chrX 135724191 135724618 -30925678 + L1MA6 LINE L1 5785 6269 -31 3 1620 732 312 108 32 chrX 135724716 135725479 -30924817 + L1ME1 LINE L1 5363 6178 -1 3 1620 349 225 192 187 chrX 135725597 135725816 -30924480 + ID_B1 SINE B4 1 220 -4 3 1620 654 235 0 56 chrX 135725841 135725985 -30924311 + B1_Mur2 SINE Alu 2 137 -12 3 1620 594 109 0 0 chrX 135725987 135726097 -30924199 + (TC)n Simple_repeat Simple_repeat 1 110 0 3 1620 369 0 0 0 chrX 135726097 135726138 -30924158 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1620 853 193 87 20 chrX 135726171 135726367 -30923929 - B3 SINE B2 -6 210 2 3 1620 535 284 37 0 chrX 135726385 135726547 -30923749 - Lx8 LINE L1 -489 6984 6817 3 1620 350 301 19 64 chrX 135726559 135726715 -30923581 - MLT1A1 LTR MaLR -251 157 9 3 1620 1945 168 63 73 chrX 135726981 135727406 -30922890 + MTC LTR MaLR 1 421 0 3 1620 495 0 0 0 chrX 135727482 135727537 -30922759 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 1620 381 259 93 0 chrX 135727767 135727875 -30922421 - MLT2D LTR ERVL -277 137 20 3 1620 595 297 44 48 chrX 135728018 135728266 -30922030 + MTEb-int LTR MaLR 1332 1578 -2 3 1620 812 296 37 45 chrX 135728271 135728649 -30921647 + MTEb LTR MaLR 4 378 -1 3 1620 1206 147 12 128 chrX 135728739 135728989 -30921307 + URR1A DNA MER1_type 6 226 0 3 1620 295 121 0 33 chrX 135729055 135729115 -30921181 + (CTG)n Simple_repeat Simple_repeat 2 59 0 3 1620 303 274 82 31 chrX 135729442 135729540 -30920756 + LTR33B LTR ERVL 93 195 -308 3 1620 1799 194 68 33 chrX 135730353 135730780 -30919516 - RMER10A LTR ERVL 0 442 1 3 1620 22 0 0 0 chrX 135731504 135731526 -30918770 + AT_rich Low_complexity Low_complexity 1 22 0 3 1620 261 57 0 0 chrX 135731862 135731897 -30918399 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1620 276 186 0 0 chrX 135732503 135732562 -30917734 + (TA)n Simple_repeat Simple_repeat 2 60 0 3 1620 404 188 29 67 chrX 135732762 135732867 -30917429 + L1M5 LINE L1 5243 5334 -906 3 1620 1016 146 0 6 chrX 135732867 135733046 -30917250 + GA-rich Low_complexity Low_complexity 3 180 0 3 1620 404 286 60 60 chrX 135733046 135733271 -30917025 + L1M5 LINE L1 5335 5572 -668 3 1620 1146 159 51 32 chrX 135733413 135733666 -30916630 - Lx7 LINE L1 0 7696 7439 3 1620 456 319 0 0 chrX 135733703 135733819 -30916477 + B1F SINE Alu 14 129 -20 3 1620 5622 38 6 0 chrX 135734877 135735592 -30914704 - L1Md_F3 LINE L1 -144 6440 5722 3 1620 851 71 121 7 chrX 135735592 135735733 -30914563 + L1Md_F3 LINE L1 6414 6570 -14 3 1620 1753 194 6 28 chrX 135736653 135737009 -30913287 + Lx4A LINE L1 6711 7058 0 3 1620 288 275 125 0 chrX 135738146 135738226 -30912070 + 5S rRNA rRNA 1 90 -31 3 1620 11187 75 26 1 chrX 135738433 135740710 -30909586 + L1_Mus2 LINE L1 4225 6566 0 3 1620 21 36 0 0 chrX 135740797 135740825 -30909471 + AT_rich Low_complexity Low_complexity 1 28 0 3 1620 921 169 117 21 chrX 135740909 135741097 -30909199 - B3 SINE B2 -10 206 1 3 1620 25 95 0 0 chrX 135741769 135741843 -30908453 + AT_rich Low_complexity Low_complexity 1 74 0 3 1620 294 132 19 0 chrX 135742489 135742542 -30907754 + L1MA9 LINE L1 6106 6159 -153 3 1620 261 167 0 0 chrX 135742626 135742668 -30907628 + L1M4 LINE L1 3995 4036 -2110 3 1620 359 314 151 40 chrX 135742706 135742832 -30907464 + RSINE1 SINE B4 2 141 -24 3 1620 279 0 0 0 chrX 135742842 135742873 -30907423 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 3 1620 456 104 0 0 chrX 135742932 135742999 -30907297 + (TG)n Simple_repeat Simple_repeat 1 67 0 3 1620 223 224 69 69 chrX 135742999 135743066 -30907230 - RSINE1 SINE B4 -12 153 86 3 1620 474 207 20 41 chrX 135743330 135743476 -30906820 - Lx6 LINE L1 -9 7451 7309 3 1620 243 301 35 88 chrX 135743573 135743686 -30906610 + PB1D10 SINE Alu 11 117 0 3 1620 226 148 18 18 chrX 135743690 135743745 -30906551 + GA-rich Low_complexity Low_complexity 3 57 0 3 1620 234 0 0 0 chrX 135743792 135743818 -30906478 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1620 2557 86 0 32 chrX 135743916 135744289 -30906007 + L1Md_F2 LINE L1 6220 6580 -2 3 1620 225 65 0 0 chrX 135744660 135744691 -30905605 + (CGG)n Simple_repeat Simple_repeat 2 32 0 3 1620 217 358 16 39 chrX 135745365 135745493 -30904803 + ID_B1 SINE B4 92 216 -8 3 1620 477 250 57 69 chrX 135746166 135746325 -30903971 + RSINE1 SINE B4 8 164 -1 3 1620 566 180 0 7 chrX 135746918 135747058 -30903238 + GA-rich Low_complexity Low_complexity 2 140 0 3 1620 387 256 88 29 chrX 135750547 135750684 -30899612 - B1F SINE Alu 0 149 5 3 1620 510 186 23 4 chrX 135750918 135751189 -30899107 + (CA)n Simple_repeat Simple_repeat 1 276 0 3 1620 285 29 0 0 chrX 135752434 135752468 -30897828 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1620 195 42 0 0 chrX 135753024 135753048 -30897248 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 3 1620 305 270 109 16 chrX 135753048 135753171 -30897125 - B1F SINE Alu -9 140 5 3 1620 510 297 72 7 chrX 135753298 135753437 -30896859 + B1F SINE Alu 2 149 0 3 1620 381 347 43 43 chrX 135754452 135754636 -30895660 + Tigger5 DNA MER2_type 1 184 -2222 3 1620 562 254 110 11 chrX 135754905 135755096 -30895200 - B3 SINE B2 -6 210 1 3 1620 643 241 5 0 chrX 135755102 135755240 -30895056 - B1_Mur1 SINE Alu -1 149 6 3 1620 452 316 38 50 chrX 135755240 135755262 -30895034 - ID_B1 SINE B4 -1 223 66 4 1620 307 135 0 19 chrX 135755279 135755332 -30894964 - HAL1-3A_ME LINE L1 -831 2027 1976 4 1620 483 63 0 0 chrX 135755979 135756042 -30894254 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1620 674 273 7 13 chrX 135756044 135756196 -30894100 - B3A SINE B2 -47 151 1 4 1620 453 274 81 39 chrX 135756269 135756494 -30893802 - B4A SINE B4 -6 286 2 4 1620 180 0 0 0 chrX 135756959 135756979 -30893317 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1620 5650 37 7 3 chrX 135757352 135758035 -30892261 - L1Md_F2 LINE L1 -1 6581 5896 4 1620 278 54 0 0 chrX 135758035 135758072 -30892224 + L1Md_F2 LINE L1 5911 5947 -635 4 1620 318 115 0 0 chrX 135758212 135758273 -30892023 + (T)n Simple_repeat Simple_repeat 1 61 0 4 1620 1108 62 21 0 chrX 135758294 135758439 -30891857 - B1_Mus1 SINE Alu 0 148 1 4 1620 462 321 94 60 chrX 135759205 135759983 -30890313 - L1ME1 LINE L1 0 6974 6171 4 1620 395 290 179 31 chrX 135760020 135760759 -30889537 - L1ME1 LINE L1 -850 6091 5244 4 1620 839 298 14 22 chrX 135760777 135761000 -30889296 - B4 SINE B4 -69 223 3 4 1620 619 296 62 80 chrX 135761148 135761407 -30888889 - L1ME1 LINE L1 -1946 4995 4756 4 1620 1186 61 0 0 chrX 135761407 135761554 -30888742 - B1_Mus1 SINE Alu 0 148 2 4 1620 619 296 62 80 chrX 135761554 135761871 -30888425 - L1ME1 LINE L1 -2186 4755 4429 4 1620 427 304 110 32 chrX 135761939 135762221 -30888075 - L1ME1 LINE L1 -5332 1091 788 4 1620 539 142 17 0 chrX 135762281 135762402 -30887894 - ORR1C1 LTR MaLR -196 178 51 4 1620 340 287 111 32 chrX 135762907 135763033 -30887263 + MIR SINE MIR 12 147 -115 4 1620 394 264 90 37 chrX 135763048 135763182 -30887114 - MLT1A1 LTR MaLR 0 408 268 4 1620 249 346 0 36 chrX 135763331 135763415 -30886881 - MLT1A1 LTR MaLR -269 105 25 4 1620 22 0 0 0 chrX 135763565 135763587 -30886709 + AT_rich Low_complexity Low_complexity 1 22 0 4 1620 31 0 0 0 chrX 135763801 135763832 -30886464 + AT_rich Low_complexity Low_complexity 1 31 0 4 1620 652 347 98 7 chrX 135764267 135764572 -30885724 + MLT1J2 LTR MaLR 2 334 -114 4 1620 240 228 0 52 chrX 135765280 135765377 -30884919 - L1M2 LINE L1 -2385 3758 3667 4 1620 21 36 0 0 chrX 135767007 135767035 -30883261 + AT_rich Low_complexity Low_complexity 1 28 0 4 1620 314 278 14 0 chrX 135767512 135767584 -30882712 - ID2 SINE ID -9 74 2 4 1620 188 418 13 25 chrX 135768583 135768740 -30881556 + MER5A DNA MER1_type 34 188 -1 4 1620 228 274 117 123 chrX 135772798 135772952 -30877344 + Arthur1 DNA Tip100 3791 3943 -4 4 1620 804 99 141 0 chrX 135773208 135773329 -30876967 - B1_Mur4 SINE Alu -8 142 5 4 1620 390 305 22 37 chrX 135773887 135774023 -30876273 - ID_B1 SINE B4 -7 217 84 4 1620 963 277 127 12 chrX 135775444 135775846 -30874450 + Lx8 LINE L1 7009 7456 -17 4 1620 658 250 33 33 chrX 135775866 135776048 -30874248 + B3A SINE B2 2 183 -15 4 1620 692 311 69 100 chrX 135776117 135776656 -30873640 + Lx8 LINE L1 6943 7464 -9 4 1620 1216 41 7 0 chrX 135776676 135776822 -30873474 + B1_Mm SINE Alu 1 147 0 4 1620 351 245 39 58 chrX 135776895 135776999 -30873297 + ORR1D-int LTR MaLR 1 102 -1268 4 1620 912 241 15 0 chrX 135777839 135778034 -30872262 + B3A SINE B2 1 198 0 4 1620 459 48 0 0 chrX 135778319 135778381 -30871915 + (TTGG)n Simple_repeat Simple_repeat 2 63 0 4 1620 1148 58 0 0 chrX 135778381 135778520 -30871776 - B1_Mm SINE Alu -8 139 1 4 1620 189 74 0 0 chrX 135778623 135778650 -30871646 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1620 1069 237 173 29 chrX 135778840 135779187 -30871109 + MTD LTR MaLR 5 401 -18 4 1620 570 209 155 0 chrX 135779802 135779931 -30870365 - B1_Mur2 SINE Alu 0 149 1 4 1620 916 164 56 90 chrX 135780115 135780349 -30869947 - URR1A DNA MER1_type 0 226 1 4 1620 1222 47 0 0 chrX 135780353 135780501 -30869795 + B1_Mus1 SINE Alu 1 148 0 4 1620 23 54 0 0 chrX 135780794 135780831 -30869465 + AT_rich Low_complexity Low_complexity 1 37 0 4 1620 575 248 7 29 chrX 135781311 135781448 -30868848 - RSINE1 SINE B4 -13 152 19 4 1620 364 232 27 0 chrX 135781463 135781575 -30868721 + L1MB2 LINE L1 6017 6131 -40 4 1620 720 251 35 5 chrX 135781911 135782111 -30868185 + B3 SINE B2 1 206 -10 4 1620 324 0 0 0 chrX 135782281 135782317 -30867979 + (TC)n Simple_repeat Simple_repeat 1 36 0 4 1620 465 19 0 0 chrX 135782317 135782370 -30867926 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1620 194 0 0 37 chrX 135782760 135782787 -30867509 + (TTTTG)n Simple_repeat Simple_repeat 4 29 0 4 1620 320 291 35 35 chrX 135783112 135783226 -30867070 - Tigger5 DNA MER2_type -2 2404 2291 4 1620 600 316 71 29 chrX 135783213 135783451 -30866845 - Tigger5 DNA MER2_type -2163 243 1 4 1620 1126 130 23 0 chrX 135783486 135783663 -30866633 + B2_Mm2 SINE B2 1 181 -14 4 1620 28 0 0 0 chrX 135784229 135784257 -30866039 + AT_rich Low_complexity Low_complexity 1 28 0 4 1620 182 35 35 0 chrX 135784513 135784524 -30865772 + (CA)n Simple_repeat Simple_repeat 1 11 0 4 1620 615 92 0 0 chrX 135784524 135784611 -30865685 + (TA)n Simple_repeat Simple_repeat 1 87 0 4 1620 182 35 35 0 chrX 135784611 135784628 -30865668 + (CA)n Simple_repeat Simple_repeat 2 19 0 4 1620 468 268 133 22 chrX 135784705 135784930 -30865366 + L1MA9 LINE L1 5477 5726 -586 4 1620 1087 211 0 37 chrX 135784955 135785172 -30865124 + B3 SINE B2 1 209 -7 4 1620 405 90 0 0 chrX 135785239 135785306 -30864990 + (TG)n Simple_repeat Simple_repeat 1 67 0 4 1620 513 47 0 0 chrX 135785306 135785369 -30864927 + (GA)n Simple_repeat Simple_repeat 1 64 0 4 1620 321 238 16 24 chrX 135785381 135785506 -30864790 + (TGAG)n Simple_repeat Simple_repeat 4 127 0 4 1620 239 0 0 31 chrX 135785506 135785538 -30864758 + (GGAGA)n Simple_repeat Simple_repeat 2 32 0 4 1620 320 316 58 88 chrX 135785586 135785916 -30864380 + L1MA9 LINE L1 5799 6118 -194 4 1620 348 301 20 27 chrX 135786165 135786312 -30863984 + MLT1D LTR MaLR 308 453 -52 4 1620 307 311 49 25 chrX 135786323 135786445 -30863851 + L1M4 LINE L1 3961 4085 -2061 4 1620 237 372 27 20 chrX 135786445 135786593 -30863703 + RSINE1 SINE B4 2 150 -15 4 1620 1252 242 61 61 chrX 135786878 135787239 -30863057 - MTE2b LTR MaLR -18 361 1 4 1620 2593 93 51 8 chrX 135788161 135788550 -30861746 + Lx3B LINE L1 6561 6966 -7 4 1620 392 0 21 0 chrX 135788561 135788609 -30861687 + (TAA)n Simple_repeat Simple_repeat 3 51 0 4 1620 387 0 0 0 chrX 135788949 135788992 -30861304 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 1620 420 228 0 0 chrX 135789177 135789256 -30861040 + PB1D10 SINE Alu 36 114 -3 4 1620 755 291 50 88 chrX 135789364 135789647 -30860649 + B4A SINE B4 1 272 -20 4 1620 256 281 10 10 chrX 135789700 135789797 -30860499 + L1MA6 LINE L1 5891 5987 -313 4 1620 887 259 16 77 chrX 135789845 135790155 -30860141 + Lx6 LINE L1 7143 7433 -27 4 1620 266 227 40 0 chrX 135790327 135790402 -30859894 + L1MB7 LINE L1 6060 6137 -47 4 202 1891 182 58 8 chrX 135790495 135790893 -30859403 - MTD LTR MaLR 0 419 2 4 1621 888 245 23 23 chrX 135790931 135791152 -30859144 - MTD LTR MaLR -2 417 197 4 1621 706 236 14 14 chrX 135791155 135791297 -30858999 - B1_Mur1 SINE Alu -6 143 2 4 1621 718 114 0 24 chrX 135791305 135791431 -30858865 + (TTTTC)n Simple_repeat Simple_repeat 2 124 0 4 1621 240 111 0 0 chrX 135791828 135791864 -30858432 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1621 990 53 0 0 chrX 135791868 135792001 -30858295 - L1_Mus1 LINE L1 0 6567 6435 4 1621 1432 38 5 5 chrX 135792205 135792392 -30857904 - L1Md_F3 LINE L1 -14 6570 6384 4 1621 803 245 50 10 chrX 135792397 135792595 -30857701 - MTD LTR MaLR -213 206 1 4 1621 243 306 99 0 chrX 135793026 135793147 -30857149 + L1MD2 LINE L1 32 164 -6383 4 1621 385 323 130 12 chrX 135793159 135793413 -30856883 - L1M4 LINE L1 -898 5248 4965 4 1621 2514 228 61 90 chrX 135793491 135793681 -30856615 + Lx7 LINE L1 5813 5992 -1704 4 1621 1153 74 0 0 chrX 135793681 135793829 -30856467 + B1_Mus1 SINE Alu 1 148 0 4 1621 2514 228 61 90 chrX 135793829 135793929 -30856367 + Lx7 LINE L1 5993 6042 -1654 4 1621 231 36 0 0 chrX 135793929 135793957 -30856339 + (TGGA)n Simple_repeat Simple_repeat 4 31 0 4 1621 2514 228 61 90 chrX 135793957 135794546 -30855750 + Lx7 LINE L1 6043 6668 -1028 4 1621 426 165 58 12 chrX 135794559 135794645 -30855651 + Lx7 LINE L1 6778 6867 -829 4 1621 2122 217 18 7 chrX 135794845 135795291 -30855005 + Lx7 LINE L1 6859 7309 -387 4 1621 1172 259 68 11 chrX 135795305 135795586 -30854710 + MTD LTR MaLR 73 369 -50 4 1621 604 226 112 51 chrX 135795624 135795937 -30854359 + Lx7 LINE L1 7365 7696 0 4 1621 27 0 0 0 chrX 135796057 135796084 -30854212 + AT_rich Low_complexity Low_complexity 1 27 0 4 1621 231 157 0 0 chrX 135796153 135796204 -30854092 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 4 1621 26 0 0 0 chrX 135796969 135796995 -30853301 + AT_rich Low_complexity Low_complexity 1 26 0 4 1621 707 311 149 6 chrX 135797030 135797353 -30852943 - Lx8 LINE L1 -149 7324 6956 4 1621 235 241 17 0 chrX 135797390 135797448 -30852848 - MER53 DNA hAT -126 67 9 4 1621 1112 261 47 19 chrX 135797559 135797817 -30852479 + B4 SINE B4 18 282 -10 4 1621 8274 65 4 7 chrX 135798058 135799167 -30851129 + L1Md_F2 LINE L1 4446 5557 -326 4 1621 3093 14 0 9 chrX 135799167 135799516 -30850780 - ORR1A0 LTR MaLR 0 346 1 4 1621 8274 65 4 7 chrX 135799516 135799550 -30850746 + L1Md_F2 LINE L1 5558 5586 -297 4 1621 7350 51 47 3 chrX 135799551 135800430 -30849866 + L1Md_F2 LINE L1 5588 6481 -101 4 1621 204 40 0 0 chrX 135800430 135800455 -30849841 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 4 1621 7350 51 47 3 chrX 135800455 135800518 -30849778 + L1Md_F2 LINE L1 6482 6569 -13 4 1621 479 262 75 21 chrX 135800803 135800990 -30849306 - L1MA9 LINE L1 -245 6067 5871 4 1621 237 360 34 42 chrX 135801047 135801166 -30849130 - PB1D7 SINE Alu -2 118 1 4 1621 289 308 74 23 chrX 135801170 135801386 -30848910 - L1MDa LINE L1 -5445 1095 869 4 1621 379 346 70 58 chrX 135801474 135801787 -30848509 - L1MDa LINE L1 -6314 319 3 4 1621 819 135 19 0 chrX 135802673 135802829 -30847467 + GA-rich Low_complexity Low_complexity 2 160 0 4 1621 547 296 106 29 chrX 135803329 135803651 -30846645 - MER34 LTR ERV1 -219 352 12 4 1621 591 202 128 49 chrX 135804062 135804075 -30846221 + Lx4B LINE L1 6835 6845 -213 4 1621 482 103 13 0 chrX 135804075 135804153 -30846143 + (CCTG)n Simple_repeat Simple_repeat 4 82 0 4 1621 591 202 128 49 chrX 135804153 135804342 -30845954 + Lx4B LINE L1 6846 7053 -5 4 1621 1751 171 18 85 chrX 135804698 135805088 -30845208 - ORR1C1 LTR MaLR -10 368 5 4 1621 254 250 41 8 chrX 135806266 135806387 -30843909 + Lx9 LINE L1 7519 7643 -1 4 1621 191 136 0 43 chrX 135806532 135806578 -30843718 + CT-rich Low_complexity Low_complexity 3 46 0 5 1621 644 227 16 0 chrX 135806633 135806761 -30843535 - B1F SINE Alu -13 136 7 5 1621 277 363 0 10 chrX 135806815 135806918 -30843378 - ID_B1 SINE B4 -17 207 106 5 1621 237 262 82 0 chrX 135808270 135808331 -30841965 + ID4_ SINE ID 4 69 -14 5 1621 218 333 80 0 chrX 135808331 135808345 -30841951 + ID SINE ID 4 84 -140 5 1621 549 165 62 23 chrX 135809985 135810115 -30840181 + Lx4B LINE L1 6919 7053 -5 5 1621 1737 319 65 28 chrX 135810335 135811510 -30838786 + Lx9 LINE L1 5633 7024 -620 5 1621 39 38 0 0 chrX 135811695 135811748 -30838548 + AT_rich Low_complexity Low_complexity 1 53 0 5 1621 4345 31 0 10 chrX 135811761 135812280 -30838016 + L1Md_F2 LINE L1 6066 6579 -3 5 1621 265 356 29 9 chrX 135812280 135812385 -30837911 - PB1D10 SINE Alu -10 107 1 5 1621 24 0 0 0 chrX 135812529 135812553 -30837743 + AT_rich Low_complexity Low_complexity 1 24 0 5 1621 828 286 115 104 chrX 135813077 135813443 -30836853 - MTE2a LTR MaLR 0 379 10 5 1621 500 243 55 22 chrX 135813464 135813645 -30836651 - Lx9 LINE L1 -1676 5968 5782 5 1621 611 243 21 28 chrX 135813847 135813991 -30836305 + B1F SINE Alu 7 149 0 5 1621 1886 184 99 2 chrX 135814201 135814615 -30835681 + Lx9 LINE L1 6505 6958 -686 5 1621 1393 260 34 58 chrX 135814654 135814952 -30835344 + Lx9 LINE L1 7120 7417 -227 5 1621 495 0 0 0 chrX 135814952 135815007 -30835289 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1621 1393 260 34 58 chrX 135815007 135815246 -30835050 + Lx9 LINE L1 7418 7644 0 5 1621 21 36 0 0 chrX 135815249 135815277 -30835019 + AT_rich Low_complexity Low_complexity 1 28 0 5 1621 423 0 0 0 chrX 135815620 135815667 -30834629 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1621 4564 60 24 24 chrX 135815829 135816171 -30834125 - Lx3_Mus LINE L1 -761 6248 5907 5 1621 317 0 70 0 chrX 135816171 135816214 -30834082 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 5 1621 4564 63 18 17 chrX 135816214 135816668 -30833628 - Lx3_Mus LINE L1 -1103 5906 5455 5 1621 8493 109 24 8 chrX 135816672 135817358 -30832938 + Lx3B LINE L1 5622 6328 -645 5 1621 2421 98 3 0 chrX 135817358 135817684 -30832612 + ORR1A2 LTR MaLR 1 327 0 5 1621 8493 109 24 8 chrX 135817684 135818327 -30831969 + Lx3B LINE L1 6329 6973 0 5 1621 657 287 58 0 chrX 135818754 135818928 -30831368 + B3A SINE B2 15 198 0 5 1621 499 188 152 26 chrX 135819323 135819514 -30830782 + Lx9 LINE L1 7404 7618 -26 5 1621 539 214 10 0 chrX 135819516 135819619 -30830677 + PB1D9 SINE Alu 2 105 -15 5 1621 525 105 11 23 chrX 135820272 135820360 -30829936 - ORR1C1 LTR MaLR -226 152 66 5 1621 509 167 10 0 chrX 135820375 135820477 -30829819 + (TA)n Simple_repeat Simple_repeat 1 103 0 5 1621 737 254 70 38 chrX 135820680 135821009 -30829287 + Lx9 LINE L1 5599 5973 -1671 5 1621 326 282 67 25 chrX 135821694 135821814 -30828482 + RSINE1 SINE B4 37 161 -4 5 1621 198 0 0 0 chrX 135822765 135822787 -30827509 + (TGAA)n Simple_repeat Simple_repeat 4 25 0 5 1621 390 340 21 14 chrX 135823615 135823758 -30826538 + ORR1E LTR MaLR 1 144 -215 5 1621 330 26 0 0 chrX 135825747 135825786 -30824510 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1621 2046 302 93 16 chrX 135825971 135826915 -30823381 - Lx9 LINE L1 -174 7470 6454 5 1621 473 246 0 123 chrX 135826924 135827009 -30823287 + Lx9 LINE L1 5723 5827 -1817 5 1621 1400 74 15 26 chrX 135827009 135827204 -30823092 + B2_Mm2 SINE B2 2 194 -1 5 1621 473 268 14 82 chrX 135827204 135827345 -30822951 + Lx9 LINE L1 5828 5970 -1674 5 1621 2359 170 31 37 chrX 135827429 135827937 -30822359 + RLTR16 LTR ERVK 1 505 0 5 1621 190 143 53 18 chrX 135828021 135828078 -30822218 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 5 1621 1594 194 133 5 chrX 135828193 135828623 -30821673 - Lx9 LINE L1 0 7644 7160 5 1621 1002 158 158 0 chrX 135828805 135828995 -30821301 - URR1A DNA MER1_type 0 226 7 5 1621 693 181 0 0 chrX 135829124 135829257 -30821039 + (TG)n Simple_repeat Simple_repeat 2 134 0 5 1621 212 163 0 0 chrX 135829778 135829821 -30820475 + T-rich Low_complexity Low_complexity 2 44 0 5 1621 1019 269 120 16 chrX 135829822 135830188 -30820108 + MTD LTR MaLR 1 404 -15 5 1621 230 285 87 106 chrX 135830500 135830519 -30819777 - LTR50 LTR ERVL -571 224 205 5 1621 321 82 0 0 chrX 135830519 135830568 -30819728 + (CATA)n Simple_repeat Simple_repeat 2 50 0 5 1621 230 285 87 106 chrX 135830568 135830709 -30819587 - LTR50 LTR ERVL -591 204 67 5 1621 301 309 0 0 chrX 135831259 135831343 -30818953 + Lx8 LINE L1 6198 6281 -1192 5 1621 420 339 104 0 chrX 135831368 135831551 -30818745 + Lx8 LINE L1 7027 7228 -245 5 1621 24 0 0 0 chrX 135831909 135831933 -30818363 + AT_rich Low_complexity Low_complexity 1 24 0 5 1621 228 346 0 0 chrX 135831934 135832038 -30818258 - Lx7 LINE L1 -30 7666 7563 5 1621 21 89 0 0 chrX 135832221 135832277 -30818019 + AT_rich Low_complexity Low_complexity 1 56 0 5 1621 222 297 25 63 chrX 135832420 135832434 -30817862 - ID SINE ID -140 84 9 5 1621 264 217 15 77 chrX 135832434 135832499 -30817797 - ID4_ SINE ID -14 69 9 5 1621 1319 196 286 6 chrX 135833171 135833489 -30816807 + MTB_Mm LTR MaLR 1 407 0 5 1621 609 14 0 0 chrX 135834123 135834193 -30816103 + (TG)n Simple_repeat Simple_repeat 1 70 0 5 1621 270 0 0 0 chrX 135834193 135834222 -30816074 + (GA)n Simple_repeat Simple_repeat 1 30 0 5 1621 252 324 42 68 chrX 135834597 135834789 -30815507 + MTEb LTR MaLR 1 187 -192 5 1621 304 343 0 9 chrX 135834805 135834914 -30815382 + ID_B1 SINE B4 106 213 -11 5 1621 657 219 16 0 chrX 135834962 135835090 -30815206 + B1F SINE Alu 7 136 -13 5 1621 212 149 0 21 chrX 135835145 135835193 -30815103 + GA-rich Low_complexity Low_complexity 3 49 0 5 1621 314 242 41 8 chrX 135835338 135835459 -30814837 - Lx9 LINE L1 -1 7643 7519 5 1621 495 264 120 33 chrX 135836274 135836458 -30813838 + B3 SINE B2 3 202 -14 5 1621 6441 72 3 191 chrX 135836770 135837432 -30812864 - L1_Mm LINE L1 -2982 2901 2337 5 1621 890 19 19 0 chrX 135837432 135837540 -30812756 - MTA_Mm LTR MaLR 0 396 287 5 1621 1214 7 0 0 chrX 135837533 135837672 -30812624 - MTA_Mm LTR MaLR -257 139 1 5 1621 10258 19 0 0 chrX 135837672 135838770 -30811526 - MTA_Mm-int LTR MaLR 0 1098 1 5 1621 3504 21 39 0 chrX 135838770 135839151 -30811145 - MTA_Mm LTR MaLR 0 396 1 5 1621 6441 72 3 191 chrX 135839151 135839541 -30810755 - L1_Mm LINE L1 -3648 2235 1852 5 1621 2145 91 30 54 chrX 135839542 135839912 -30810384 - RLTR9F LTR ERVK -54 361 1 5 1621 1832 189 67 6 chrX 135839912 135840269 -30810027 + RMER1C Other Other 963 1341 -1 5 1621 771 183 0 0 chrX 135840751 135840931 -30809365 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1621 1320 41 0 0 chrX 135841211 135841357 -30808939 + B1_Mm SINE Alu 2 147 0 5 1621 218 106 42 21 chrX 135841357 135841405 -30808891 + A-rich Low_complexity Low_complexity 5 53 0 5 1621 327 104 0 0 chrX 135842576 135842624 -30807672 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1621 391 338 34 38 chrX 135842671 135842963 -30807333 - MER21-int LTR ERV1 -1748 2443 2153 5 1621 869 110 7 0 chrX 135843706 135843842 -30806454 + (GAA)n Simple_repeat Simple_repeat 1 137 0 5 1621 455 283 120 0 chrX 135843928 135844119 -30806177 + Lx8 LINE L1 6881 7094 -379 5 1621 917 175 185 2 chrX 135844121 135844376 -30805920 + RLTR16 LTR ERVK 124 411 -94 5 1621 464 247 6 0 chrX 135844393 135844563 -30805733 + (TG)n Simple_repeat Simple_repeat 1 171 0 5 1621 371 205 26 0 chrX 135844570 135844648 -30805648 + RLTR16 LTR ERVK 402 481 -24 5 1621 359 135 26 39 chrX 135844649 135844726 -30805570 + RLTR16 LTR ERVK 430 505 0 5 1621 371 323 114 15 chrX 135844728 135844929 -30805367 + Lx8 LINE L1 7116 7336 -137 5 1621 618 321 45 36 chrX 135845459 135845818 -30804478 - MER4B-int LTR ERV1 -2530 4228 3867 5 1621 974 243 20 0 chrX 135845856 135846058 -30804238 - B3 SINE B2 -6 210 5 5 1621 300 296 30 22 chrX 135846281 135846416 -30803880 - MER21-int LTR ERV1 -3653 538 403 5 1621 420 286 94 39 chrX 135846475 135846736 -30803560 - MER4B-int LTR ERV1 -3412 3346 3108 5 1621 512 265 231 45 chrX 135846769 135847171 -30803125 - Lx9 LINE L1 0 7644 7168 5 1621 1051 333 92 48 chrX 135847221 135847783 -30802513 - MER77 LTR ERVL -11 596 10 5 1621 1118 78 35 0 chrX 135847972 135848113 -30802183 + B1_Mm SINE Alu 2 147 0 5 1621 234 150 0 0 chrX 135848113 135848153 -30802143 + (A)n Simple_repeat Simple_repeat 1 40 0 5 1621 893 329 39 8 chrX 135849193 135849450 -30800846 + B4A SINE B4 27 291 -1 5 1621 3905 92 12 8 chrX 135850321 135850836 -30799460 - L1Md_F2 LINE L1 -1 6581 6065 5 1621 804 260 95 7 chrX 135851005 135851299 -30798997 - L1MA8 LINE L1 -17 6274 5955 5 1621 265 111 56 0 chrX 135851309 135851363 -30798933 + CT-rich Low_complexity Low_complexity 1 57 0 5 1621 550 337 6 47 chrX 135851366 135851537 -30798759 - RSINE1 SINE B4 0 165 2 5 1621 309 281 72 0 chrX 135851622 135851756 -30798540 - L1MA8 LINE L1 -359 5941 5798 5 1621 1727 128 173 67 chrX 135851968 135852327 -30797969 + RLTR9D LTR ERVK 1 397 -6 5 1621 692 210 77 68 chrX 135852338 135852558 -30797738 + ETnERV-int LTR ERVK 3 224 -3090 5 1621 608 62 73 0 chrX 135852575 135852671 -30797625 + L1Md_F2 LINE L1 6457 6559 -23 5 1621 351 0 0 0 chrX 135852671 135852710 -30797586 + (TAA)n Simple_repeat Simple_repeat 1 39 0 5 1621 6113 235 34 17 chrX 135852725 135854139 -30796157 + ETnERV-int LTR ERVK 328 2394 -5012 5 1621 4158 306 48 35 chrX 135854181 135856031 -30794265 + SRV_MM-int LTR ERVK 1729 3602 -2565 5 1621 257 179 0 0 chrX 135856027 135856066 -30794230 + ETnERV-int LTR ERVK 3133 3171 -1673 5 1621 11951 126 5 10 chrX 135856056 135857762 -30792534 + ETnERV2-int LTR ERVK 4530 6227 -1179 5 1621 904 215 85 20 chrX 135857753 135858026 -30792270 + ETnERV2-int LTR ERVK 6222 6422 -984 5 1621 366 137 27 27 chrX 135858241 135858316 -30791980 + ETnERV2-int LTR ERVK 7331 7405 -1 5 1621 2577 124 40 25 chrX 135858317 135858714 -30791582 + RLTR9D LTR ERVK 1 403 0 5 1621 459 285 14 7 chrX 135858721 135858866 -30791430 + L1M2 LINE L1 3439 3584 -2559 5 1621 2623 311 75 35 chrX 135858880 135860784 -30789512 + Lx8 LINE L1 3933 5902 -1571 5 1621 329 260 52 0 chrX 135861244 135861330 -30788966 - B4 SINE B4 -106 186 97 5 1621 217 176 0 19 chrX 135861425 135861477 -30788819 + T-rich Low_complexity Low_complexity 6 56 0 5 1621 879 272 49 31 chrX 135861495 135861783 -30788513 + Lx9 LINE L1 7225 7517 -127 5 1621 234 215 86 149 chrX 135861797 135861972 -30788324 + Lx9 LINE L1 7464 7627 -17 5 1621 209 122 39 58 chrX 135861986 135862038 -30788258 + A-rich Low_complexity Low_complexity 6 56 0 5 1621 332 313 56 78 chrX 135862071 135862251 -30788045 + MLT1A1 LTR MaLR 5 180 -228 5 1621 1218 62 7 0 chrX 135862521 135862667 -30787629 + B1_Mus2 SINE Alu 1 147 0 5 1621 547 298 47 0 chrX 135862880 135863051 -30787245 + B3A SINE B2 2 180 -18 6 1621 457 278 275 42 chrX 135863100 135863336 -30786960 + B4 SINE B4 2 292 0 6 1621 2466 175 70 10 chrX 135863358 135863872 -30786424 + RMER20B LTR ERVK 4 548 -79 6 1621 797 191 0 90 chrX 135863909 135864087 -30786209 + RMER20B LTR ERVK 461 622 -5 6 1621 237 33 0 0 chrX 135864087 135864117 -30786179 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1621 207 258 0 0 chrX 135864118 135864180 -30786116 + (CATG)n Simple_repeat Simple_repeat 3 64 0 6 1621 772 302 53 38 chrX 135864831 135865096 -30785200 + B4 SINE B4 10 278 -14 6 1621 207 0 0 0 chrX 135865105 135865128 -30785168 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 1621 272 310 132 24 chrX 135865449 135865654 -30784642 + L1M3e LINE L1 582 808 -6222 6 1621 705 211 21 0 chrX 135866304 135866446 -30783850 - B1_Mur4 SINE Alu -1 149 5 6 1621 269 324 62 99 chrX 135866637 135866652 -30783644 + B4 SINE B4 73 224 -65 6 1621 603 255 0 14 chrX 135866652 135866795 -30783501 + B1_Mur4 SINE Alu 9 149 -1 6 1621 221 26 0 174 chrX 135866802 135866828 -30783468 + A-rich Low_complexity Low_complexity 1 19 0 6 1621 1271 41 0 7 chrX 135866828 135866977 -30783319 + B1_Mus1 SINE Alu 1 148 0 6 1621 221 26 0 174 chrX 135866977 135866996 -30783300 + A-rich Low_complexity Low_complexity 20 38 0 6 1621 534 16 0 0 chrX 135867045 135867108 -30783188 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 1621 397 17 0 62 chrX 135867613 135867677 -30782619 + (TTTG)n Simple_repeat Simple_repeat 2 61 0 6 1621 1175 30 30 0 chrX 135867677 135867811 -30782485 - B1_Mus2 SINE Alu -9 138 1 6 1621 237 197 0 0 chrX 135868737 135868803 -30781493 + (CGA)n Simple_repeat Simple_repeat 1 66 0 6 1621 334 324 11 54 chrX 135869278 135869557 -30780739 + C-rich Low_complexity Low_complexity 1 267 0 6 1621 1159 76 0 0 chrX 135869569 135869713 -30780583 - B1_Mus1 SINE Alu 0 148 5 6 1621 210 370 12 12 chrX 135869803 135869970 -30780326 + CT-rich Low_complexity Low_complexity 5 171 0 6 1621 216 0 0 0 chrX 135870007 135870031 -30780265 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1621 299 274 0 21 chrX 135870049 135870146 -30780150 + CT-rich Low_complexity Low_complexity 6 100 0 6 1621 343 340 21 0 chrX 135870226 135870367 -30779929 + CT-rich Low_complexity Low_complexity 4 147 0 6 1621 305 319 7 34 chrX 135870447 135870596 -30779700 + CT-rich Low_complexity Low_complexity 1 145 0 6 1621 313 293 22 36 chrX 135870583 135870793 -30779503 + CT-rich Low_complexity Low_complexity 1 206 0 6 1621 252 143 0 0 chrX 135871508 135871550 -30778746 + (GGA)n Simple_repeat Simple_repeat 1 42 0 6 1621 471 273 12 24 chrX 135872826 135872972 -30777324 + MER5A DNA MER1_type 24 164 -2 6 1621 518 285 48 42 chrX 135873299 135873464 -30776832 - MLT1C LTR MaLR -8 459 294 6 1621 2780 88 23 23 chrX 135873597 135873994 -30776302 - L1_Mus3 LINE L1 0 6638 6242 6 1621 403 255 77 45 chrX 135874079 135874235 -30776061 - RLTR14 LTR ERV1 0 382 222 6 1621 1311 34 0 0 chrX 135874422 135874568 -30775728 + B1_Mm SINE Alu 2 147 0 6 1621 189 171 0 0 chrX 135874568 135874603 -30775693 + A-rich Low_complexity Low_complexity 1 35 0 6 1621 267 273 50 10 chrX 135875478 135875578 -30774718 - MLT1C-int LTR MaLR -962 527 424 6 1621 433 225 0 0 chrX 135876487 135876567 -30773729 + B3 SINE B2 4 83 -133 6 1621 433 224 0 34 chrX 135876628 135876716 -30773580 - B3A SINE B2 -106 92 8 6 1621 315 0 0 0 chrX 135876720 135876755 -30773541 + (TAAAA)n Simple_repeat Simple_repeat 5 39 0 6 1621 426 339 72 41 chrX 135876964 135877158 -30773138 - MER74A LTR ERVL -305 253 54 6 1621 263 286 30 10 chrX 135877421 135877520 -30772776 - HERVL74-int LTR ERVL -434 5251 5151 6 1621 322 235 99 16 chrX 135877699 135877820 -30772476 - B1F1 SINE Alu -16 133 3 6 1621 230 364 64 46 chrX 135877927 135878100 -30772196 - MER34 LTR ERV1 -68 474 299 6 1621 365 238 0 0 chrX 135878155 135878218 -30772078 - ID2 SINE ID -18 65 3 6 1621 288 309 0 146 chrX 135878224 135878368 -30771928 - PB1 SINE Alu -2 125 3 6 1621 975 206 9 42 chrX 135878616 135878829 -30771467 - B3 SINE B2 -10 206 1 6 1621 756 104 47 31 chrX 135879396 135879525 -30770771 - B2_Mm2 SINE B2 -2 193 63 6 1621 3115 139 31 24 chrX 135879525 135880064 -30770232 + RLTR13D1 LTR ERVK 1 543 -359 6 1621 3915 80 30 9 chrX 135880037 135880605 -30769691 + RLTR13D1 LTR ERVK 227 806 0 6 1621 562 40 0 39 chrX 135880605 135880672 -30769624 - B2_Mm2 SINE B2 -130 65 2 6 1621 619 241 51 0 chrX 135880809 135880946 -30769350 - B1F SINE Alu -5 144 1 6 1621 225 119 116 23 chrX 135880977 135881020 -30769276 - PB1D10 SINE Alu -7 110 64 6 1621 513 258 70 35 chrX 135881539 135881768 -30768528 - RLTR42-int LTR ERVK -4122 1400 1164 6 1621 231 283 0 0 chrX 135881790 135881843 -30768453 - B1F SINE Alu -64 85 33 6 1621 1289 48 0 0 chrX 135881867 135882014 -30768282 - B1_Mus2 SINE Alu 0 147 1 6 1621 569 152 337 6 chrX 135882610 135882776 -30767520 + URR1A DNA MER1_type 1 221 -5 6 1621 1188 270 111 46 chrX 135884434 135884938 -30765358 - LTR55 LTR ERV -11 537 1 6 1621 694 274 75 10 chrX 135886023 135886222 -30764074 + B3 SINE B2 4 215 -1 6 1621 1576 164 71 7 chrX 135887910 135888204 -30762092 - MTD LTR MaLR -106 313 1 6 1621 701 243 6 173 chrX 135888223 135888546 -30761750 - MTD-int LTR MaLR -12 1246 978 6 1621 382 290 25 49 chrX 135888978 135889141 -30761155 - RLTR14 LTR ERV1 0 382 224 6 1621 1691 236 171 69 chrX 135889440 135890233 -30760063 - MTD-int LTR MaLR -294 964 91 6 1621 28 29 0 0 chrX 135891680 135891715 -30758581 + AT_rich Low_complexity Low_complexity 1 35 0 6 1621 934 281 25 18 chrX 135891725 135892001 -30758295 + B4A SINE B4 1 278 -14 6 1621 323 105 0 17 chrX 135892024 135892082 -30758214 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1621 1730 206 95 47 chrX 135892168 135892739 -30757557 + RMER20B LTR ERVK 26 623 -4 6 1621 352 234 13 0 chrX 135892743 135892820 -30757476 - MTE2b LTR MaLR -38 341 264 6 1621 3335 41 177 2 chrX 135893246 135893682 -30756614 + RLTR1B LTR ERV1 1 512 0 6 1621 216 0 0 0 chrX 135893859 135893883 -30756413 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1621 2308 162 5 22 chrX 135894181 135894586 -30755710 - RMER10B LTR ERVL 0 398 1 6 1621 267 207 35 0 chrX 135894634 135894692 -30755604 - MER82 DNA MER2_type -396 257 198 6 1621 550 289 20 7 chrX 135894747 135894897 -30755399 - B3A SINE B2 -15 183 32 6 1621 275 0 0 28 chrX 135894900 135894936 -30755360 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1621 276 53 0 0 chrX 135894982 135895020 -30755276 + (T)n Simple_repeat Simple_repeat 1 38 0 6 1621 609 183 51 44 chrX 135895057 135895194 -30755102 - B1_Mur4 SINE Alu -7 143 6 6 1621 546 296 53 28 chrX 135895471 135895753 -30754543 - LTR52-int LTR ERVL -3320 2365 2077 6 1621 1665 306 112 22 chrX 135895899 135896746 -30753550 - LTR52-int LTR ERVL -1551 2005 1083 6 1621 2524 90 120 0 chrX 135897215 135897582 -30752714 + RLTR10A LTR ERVK 1 411 0 6 1621 373 295 151 19 chrX 135898010 135898169 -30752127 + B3A SINE B2 1 180 -18 6 1621 857 214 75 16 chrX 135898222 135898440 -30751856 + B3 SINE B2 2 210 -6 6 1621 644 104 10 0 chrX 135898743 135898839 -30751457 - ORR1B2 LTR MaLR -8 359 263 6 1621 607 277 53 0 chrX 135898829 135899035 -30751261 - LTR53 LTR ERVL -272 247 31 6 1621 984 66 5 126 chrX 135899431 135899530 -30750766 + URR1A DNA MER1_type 60 157 -69 6 1621 3255 88 5 5 chrX 135899530 135899973 -30750323 + L1_Mus3 LINE L1 6194 6636 -2 6 1621 984 66 5 126 chrX 135899973 135900063 -30750233 + URR1A DNA MER1_type 158 226 0 6 1621 882 209 109 123 chrX 135900097 135900430 -30749866 - MT2A LTR ERVL -145 456 1 6 1621 628 235 159 18 chrX 135901892 135902120 -30748176 + Lx8 LINE L1 7208 7467 -6 6 1621 189 121 0 0 chrX 135902470 135902503 -30747793 + (TTG)n Simple_repeat Simple_repeat 1 33 0 6 1621 655 283 20 40 chrX 135902800 135902999 -30747297 + B3A SINE B2 2 196 -2 6 1621 788 281 55 81 chrX 135903031 135903341 -30746955 + MTEa LTR MaLR 63 364 -15 6 1621 1432 93 0 15 chrX 135904514 135904710 -30745586 - B2_Mm2 SINE B2 -1 194 2 6 1621 262 268 74 27 chrX 135904970 135905085 -30745211 + L1MEg2 LINE L1 198 250 -6202 6 1621 211 308 215 0 chrX 135905271 135905378 -30744918 + RSINE1 SINE B4 16 145 -20 6 1621 894 19 0 0 chrX 135905383 135905487 -30744809 + (CA)n Simple_repeat Simple_repeat 2 105 0 6 1621 285 349 0 0 chrX 135905487 135905570 -30744726 - PB1D10 SINE Alu -34 83 1 6 1621 185 329 25 12 chrX 135905788 135905868 -30744428 + L3 LINE CR1 4312 4392 -97 6 1621 228 86 0 0 chrX 135906055 135906090 -30744206 + (CAA)n Simple_repeat Simple_repeat 2 36 0 6 1621 242 257 12 108 chrX 135906125 135906208 -30744088 + RSINE1 SINE B4 91 165 0 6 1621 414 0 0 0 chrX 135906349 135906395 -30743901 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1621 1689 175 84 54 chrX 135906454 135906882 -30743414 - RMER10A LTR ERVL 0 442 2 6 1621 344 227 52 52 chrX 135907812 135907947 -30742349 - L1MA6 LINE L1 -1 6299 6165 6 1621 513 296 68 19 chrX 135907991 135908153 -30742143 - B3A SINE B2 -15 183 14 6 1621 921 300 82 54 chrX 135908263 135908851 -30741445 - L1M2 LINE L1 -1206 4937 4334 6 1621 821 177 14 7 chrX 135908938 135909086 -30741210 - B1_Mur3 SINE Alu 0 149 1 6 1621 633 260 7 7 chrX 135909178 135909325 -30740971 + MTEa LTR MaLR 56 202 -177 6 1621 1146 75 7 0 chrX 135909340 135909486 -30740810 + B1_Mus1 SINE Alu 2 148 0 6 1621 601 319 11 0 chrX 135909531 135909713 -30740583 + B3A SINE B2 1 184 -14 6 1621 233 302 0 0 chrX 135911040 135911103 -30739193 - RMER15 LTR ERVL -110 465 403 6 1621 836 257 82 9 chrX 135911103 135911323 -30738973 - Lx8 LINE L1 -207 7266 7031 6 1621 1161 68 7 0 chrX 135911897 135912043 -30738253 - B1_Mus1 SINE Alu 0 148 2 7 1621 459 281 43 50 chrX 135912483 135912644 -30737652 - MIR SINE MIR -102 160 1 7 1621 1138 75 7 0 chrX 135913498 135913645 -30736651 - B1_Mus1 SINE Alu 0 148 1 7 1621 241 286 18 0 chrX 135913911 135913967 -30736329 + B1F SINE Alu 13 69 -80 7 1621 225 0 0 0 chrX 135913975 135914000 -30736296 + (TG)n Simple_repeat Simple_repeat 1 25 0 7 1621 700 31 10 10 chrX 135914000 135914095 -30736201 + (GA)n Simple_repeat Simple_repeat 1 96 0 7 1621 326 307 11 0 chrX 135915620 135915708 -30734588 - B1F SINE Alu -17 132 44 7 1621 1691 180 83 23 chrX 135915997 135916383 -30733913 - MTD LTR MaLR 0 419 11 7 1621 275 390 58 17 chrX 135916637 135916809 -30733487 - MLT2F LTR ERVL -299 364 186 7 1621 1601 208 2 48 chrX 135917062 135917476 -30732820 - RCHARR1 DNA MER1_type -48 926 532 7 202 36123 35 0 0 chrX 135917493 135922892 -30727404 + L1Md_T LINE L1 94 5589 -297 7 1622 9123 7 0 0 chrX 135922892 135923888 -30726408 + L1Md_T LINE L1 5590 6585 0 7 1622 1107 251 34 150 chrX 135923901 135924435 -30725861 - RCHARR1 DNA MER1_type -457 517 46 7 1622 478 355 64 0 chrX 135924475 135924726 -30725570 + Lx8 LINE L1 6963 7229 -244 7 1622 459 0 0 0 chrX 135924874 135924925 -30725371 + (TC)n Simple_repeat Simple_repeat 2 52 0 7 1622 306 0 0 0 chrX 135924925 135924958 -30725338 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1622 347 71 0 91 chrX 135925107 135925119 -30725177 - L1_Mus3 LINE L1 0 6638 6627 7 1622 1084 95 0 20 chrX 135925119 135925270 -30725026 - B1_Mus1 SINE Alu 0 148 1 7 1622 369 0 0 0 chrX 135925272 135925313 -30724983 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 1622 347 71 0 91 chrX 135925313 135925374 -30724922 - L1_Mus3 LINE L1 -12 6626 6569 7 1622 207 0 0 0 chrX 135926940 135926963 -30723333 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1622 655 236 27 14 chrX 135928590 135928736 -30721560 + B1_Mur1 SINE Alu 2 149 0 7 1622 297 68 0 0 chrX 135929004 135929048 -30721248 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 7 1622 1126 51 7 0 chrX 135929048 135929185 -30721111 - B1_Mus2 SINE Alu -9 138 1 7 1622 402 21 0 0 chrX 135929270 135929317 -30720979 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 1622 384 276 98 0 chrX 135929534 135929657 -30720639 - MER5A DNA MER1_type -27 162 28 7 1622 301 189 89 0 chrX 135931573 135931652 -30718644 + PB1 SINE Alu 42 120 0 7 1622 790 305 15 37 chrX 135931654 135931926 -30718370 + B4 SINE B4 3 268 -24 7 1622 253 185 15 15 chrX 135932038 135932104 -30718192 + GA-rich Low_complexity Low_complexity 4 69 0 7 1622 7937 60 9 1 chrX 135932115 135933434 -30716862 + L1_Mus1 LINE L1 5240 6567 0 7 1622 192 243 0 0 chrX 135934083 135934157 -30716139 + (TCG)n Simple_repeat Simple_repeat 2 75 0 7 1622 249 108 0 0 chrX 135934155 135934192 -30716104 + (TCC)n Simple_repeat Simple_repeat 3 39 0 7 1622 1003 72 0 0 chrX 135935205 135935343 -30714953 - L1_Mus2 LINE L1 -11 6555 6418 7 1622 260 263 60 0 chrX 135935712 135935851 -30714445 - L1MA4 LINE L1 -85 6215 6062 7 1622 3274 176 96 16 chrX 135936003 135936703 -30713593 + RMER19B LTR ERVK 147 902 0 7 1622 276 111 0 0 chrX 135936734 135936779 -30713517 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1622 319 301 74 55 chrX 135936938 135937307 -30712989 - L1MA4 LINE L1 -428 5872 5495 7 1622 249 0 73 0 chrX 135937532 135937573 -30712723 + (TTG)n Simple_repeat Simple_repeat 2 45 0 7 1622 5448 48 24 3 chrX 135937581 135938255 -30712041 - L1Md_F2 LINE L1 0 6582 5895 7 1622 225 0 0 0 chrX 135938341 135938366 -30711930 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 7 1622 970 75 0 0 chrX 135938366 135938500 -30711796 - B1_Mus1 SINE Alu -9 139 6 7 1622 262 289 0 0 chrX 135938504 135938587 -30711709 - L1M2 LINE L1 -1981 4165 4083 7 1622 285 275 26 35 chrX 135938628 135938741 -30711555 - B3A SINE B2 -15 183 72 7 1622 21 36 0 0 chrX 135938788 135938816 -30711480 + AT_rich Low_complexity Low_complexity 1 28 0 7 1622 232 182 29 29 chrX 135938836 135938904 -30711392 + Lx7 LINE L1 7613 7680 -16 7 1622 698 182 66 0 chrX 135939122 135939259 -30711037 - B1_Mus2 SINE Alu 0 147 2 7 1622 360 340 117 18 chrX 135939272 135939811 -30710485 - L1M2 LINE L1 -2277 3863 3275 7 1622 1393 77 6 0 chrX 135940055 135940237 -30710059 - B2_Mm1a SINE B2 -9 184 2 7 1622 646 294 133 0 chrX 135940314 135940562 -30709734 - B4 SINE B4 -10 282 2 7 1622 2048 174 105 3 chrX 135940602 135940982 -30709314 + MTC LTR MaLR 1 419 -2 7 1622 1310 128 64 0 chrX 135940984 135941203 -30709093 - MTC LTR MaLR -48 373 141 7 1622 1965 171 106 19 chrX 135941196 135941720 -30708576 - MTC-int LTR MaLR -227 1031 104 7 1622 410 273 125 43 chrX 135941725 135941909 -30708387 - Lx6 LINE L1 -2 7458 7260 7 1622 477 133 16 167 chrX 135941910 135942036 -30708260 - MTC LTR MaLR -314 107 1 7 1622 326 93 18 18 chrX 135942036 135942091 -30708205 + MTC LTR MaLR 362 416 -5 7 1622 5177 151 113 48 chrX 135942092 135942684 -30707612 + MTC-int LTR MaLR 5 616 -642 7 1622 2900 93 38 0 chrX 135942684 135943101 -30707195 + Lx3B LINE L1 6537 6969 -4 7 1622 5177 151 113 48 chrX 135943101 135943685 -30706611 + MTC-int LTR MaLR 617 1258 0 7 1622 2415 121 99 10 chrX 135943685 135944070 -30706226 + MTC LTR MaLR 1 419 -2 7 1622 2284 199 68 7 chrX 135944071 135944576 -30705720 - Lx9 LINE L1 -18 7626 7092 7 1622 360 43 0 0 chrX 135944576 135944622 -30705674 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1622 2284 199 68 7 chrX 135944622 135944677 -30705619 - Lx9 LINE L1 -553 7091 7033 7 1622 293 0 0 0 chrX 135944820 135944855 -30705441 - Lx2 LINE L1 -188 6809 6775 7 1622 2082 62 0 0 chrX 135944853 135945126 -30705170 - Lx2 LINE L1 -352 6645 6373 7 1622 7136 129 8 20 chrX 135945127 135945748 -30704548 - L1_Mm LINE L1 -7 5876 5252 7 1622 1631 26 0 20 chrX 135945748 135945944 -30704352 - B2_Mm1t SINE B2 0 193 2 7 1622 7136 129 8 20 chrX 135945944 135946541 -30703755 - L1_Mm LINE L1 -632 5251 4672 7 1622 6334 113 24 0 chrX 135946541 135947488 -30702808 + Lx2 LINE L1 6027 6996 -1 7 1622 368 147 73 0 chrX 135947505 135947573 -30702723 + MTD LTR MaLR 337 409 -10 7 1622 280 378 9 9 chrX 135947663 135947775 -30702521 - PB1D10 SINE Alu -1 116 5 7 1622 305 299 128 17 chrX 135947878 135948058 -30702238 - L1M4 LINE L1 -5314 1228 1029 7 1622 342 267 87 38 chrX 135948158 135948341 -30701955 - L1M4 LINE L1 -5634 908 717 7 1622 1201 48 0 0 chrX 135948416 135948561 -30701735 - B1_Mm SINE Alu -2 145 1 7 1622 23 54 0 0 chrX 135948567 135948604 -30701692 + AT_rich Low_complexity Low_complexity 1 37 0 7 1622 261 265 106 24 chrX 135949263 135949348 -30700948 - BC1_Mm scRNA scRNA -56 96 5 7 1622 2623 43 0 0 chrX 135951531 135951858 -30698438 - L1_Mm LINE L1 -145 5738 5412 7 1622 2030 58 0 4 chrX 135951858 135952116 -30698180 + L1_Mus1 LINE L1 6311 6567 0 7 1622 864 314 43 49 chrX 135952171 135952499 -30697797 - ORR1E LTR MaLR -19 340 15 7 1622 513 32 0 0 chrX 135953386 135953449 -30696847 + (TG)n Simple_repeat Simple_repeat 1 63 0 7 1622 216 0 0 0 chrX 135953449 135953472 -30696824 + (GA)n Simple_repeat Simple_repeat 1 24 0 7 1622 635 252 0 0 chrX 135953472 135953595 -30696701 - B1F SINE Alu -26 123 1 7 1622 451 219 50 58 chrX 135953757 135953878 -30696418 - PB1D7 SINE Alu 0 120 1 7 1622 481 291 58 29 chrX 135954463 135954704 -30695592 - LTR40c LTR ERVL -70 395 148 7 1622 522 0 0 0 chrX 135954844 135954902 -30695394 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 1622 652 262 128 12 chrX 135955534 135955878 -30694418 - L1ME3A LINE L1 -180 5993 5610 7 1622 1014 261 48 11 chrX 135956398 135956669 -30693627 - B4 SINE B4 -10 282 2 7 1622 227 241 0 0 chrX 135957024 135957082 -30693214 - L1M2 LINE L1 -363 5937 5880 7 1622 846 78 0 0 chrX 135957153 135957268 -30693028 + (TC)n Simple_repeat Simple_repeat 2 116 0 7 1622 378 299 0 0 chrX 135957718 135957795 -30692501 + ID4 SINE ID 6 82 -1 7 1622 229 284 49 0 chrX 135958390 135958492 -30691804 - L1MB8 LINE L1 -170 6008 5902 7 1622 24 0 0 0 chrX 135958532 135958556 -30691740 + AT_rich Low_complexity Low_complexity 1 24 0 7 1622 2780 73 17 17 chrX 135958556 135958971 -30691325 + L1_Mur1 LINE L1 3668 4082 -1804 7 1622 965 206 19 24 chrX 135958971 135959180 -30691116 - B3 SINE B2 -8 208 1 7 1622 871 264 72 47 chrX 135959226 135959887 -30690409 - L1MB8 LINE L1 -360 5818 5144 7 1622 404 278 138 79 chrX 135959898 135960120 -30690176 - L1M2 LINE L1 -743 5400 5173 7 1622 231 36 0 0 chrX 135960120 135960148 -30690148 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 7 1622 404 278 138 79 chrX 135960148 135960230 -30690066 - L1M2 LINE L1 -971 5172 5078 7 1622 1052 214 24 9 chrX 135960231 135960443 -30689853 + B3 SINE B2 2 216 0 7 1622 929 296 16 16 chrX 135960469 135960837 -30689459 - L1M2 LINE L1 -1053 5090 4723 7 1622 650 274 101 18 chrX 135960843 135961016 -30689280 + L1M2 LINE L1 5424 5605 -695 7 1622 2949 70 22 5 chrX 135961016 135961418 -30688878 - L1_Mus3 LINE L1 -7 6631 6223 7 1622 650 274 101 18 chrX 135961418 135961571 -30688725 + L1M2 LINE L1 5606 5777 -523 7 1622 231 313 12 0 chrX 135961847 135961930 -30688366 - Lx9 LINE L1 -203 7441 7358 7 1622 345 299 72 38 chrX 135961933 135962169 -30688127 - L1M4 LINE L1 -1032 5114 4871 7 1622 211 200 0 0 chrX 135962245 135962280 -30688016 + polypyrimidine Low_complexity Low_complexity 2 36 0 7 1622 1350 67 0 0 chrX 135962280 135962458 -30687838 + (TCTCC)n Simple_repeat Simple_repeat 1 178 0 7 1622 792 103 0 0 chrX 135962462 135962578 -30687718 + (TTTC)n Simple_repeat Simple_repeat 2 117 0 7 1622 601 241 97 41 chrX 135962578 135962898 -30687398 - L1M4 LINE L1 -2197 3949 3612 7 1622 534 54 0 0 chrX 135962922 135962996 -30687300 + (TATG)n Simple_repeat Simple_repeat 2 75 0 7 1622 1147 65 0 0 chrX 135962996 135963134 -30687162 - B1_Mus1 SINE Alu -9 139 2 7 1622 24 67 0 0 chrX 135963262 135963307 -30686989 + AT_rich Low_complexity Low_complexity 1 45 0 7 1622 279 267 66 11 chrX 135963546 135963728 -30686568 - L1M4 LINE L1 -2884 3262 3071 7 1622 528 273 42 28 chrX 135964130 135964408 -30685888 + L1MB8 LINE L1 5719 6006 -306 7 1622 229 158 0 0 chrX 135964457 135964495 -30685801 + ID4 SINE ID 5 42 -41 7 1622 5207 201 67 19 chrX 135964662 135965797 -30684499 + Lx5 LINE L1 5854 7042 -8 7 1622 336 376 45 32 chrX 135965972 135966127 -30684169 - LTR50 LTR ERVL -237 558 385 7 1622 201 267 0 0 chrX 135966345 135966390 -30683906 + GA-rich Low_complexity Low_complexity 3 47 0 7 1622 225 278 0 122 chrX 135966391 135966481 -30683815 - MLT2C1 LTR ERVL -49 514 436 7 1622 198 250 0 0 chrX 135966666 135966722 -30683574 + (TATATG)n Simple_repeat Simple_repeat 5 60 0 7 1622 323 184 11 0 chrX 135966813 135966900 -30683396 + (TA)n Simple_repeat Simple_repeat 1 88 0 8 1622 945 50 8 0 chrX 135968206 135968327 -30681969 - B1_Mus1 SINE Alu -26 122 1 8 1622 516 203 14 61 chrX 135968327 135968352 -30681944 - ID_B1 SINE B4 -22 201 63 8 1622 222 171 0 0 chrX 135969619 135969660 -30680636 + (TATG)n Simple_repeat Simple_repeat 2 42 0 8 1622 1575 132 27 24 chrX 135969807 135970101 -30680195 + RLTR11B LTR ERVK 159 453 0 8 1622 698 259 112 32 chrX 135970102 135970477 -30679819 - L1MB8 LINE L1 -80 6098 5694 8 1622 440 280 11 0 chrX 135970510 135970603 -30679693 + B3 SINE B2 1 94 -122 8 1622 941 220 137 8 chrX 135970633 135970766 -30679530 - Lx9 LINE L1 -44 7600 7431 8 1622 393 22 0 0 chrX 135970766 135970812 -30679484 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1622 941 220 137 8 chrX 135970812 135971036 -30679260 - Lx9 LINE L1 -214 7430 7198 8 1622 213 276 0 26 chrX 135971037 135971115 -30679181 + (CCCCG)n Simple_repeat Simple_repeat 3 78 0 8 1622 216 162 0 0 chrX 135971045 135971082 -30679214 + C-rich Low_complexity Low_complexity 1 37 0 8 1622 775 89 0 0 chrX 135971164 135971276 -30679020 - L1_Mus2 LINE L1 0 6566 6455 8 1622 1963 132 115 3 chrX 135971276 135971649 -30678647 + RLTR9F LTR ERVK 1 415 0 8 1622 585 209 316 25 chrX 135971650 135971846 -30678450 - Lx9 LINE L1 -447 7197 6945 8 1622 4005 227 63 104 chrX 135971846 135972949 -30677347 - ORR1D1-int LTR MaLR -309 1061 5 8 1622 1614 216 33 8 chrX 135972953 135973318 -30676978 - ORR1D1 LTR MaLR 0 374 1 8 1622 334 289 27 41 chrX 135973320 135973428 -30676868 + B4 SINE B4 114 224 -68 8 1622 412 194 0 0 chrX 135973475 135973537 -30676759 + B4 SINE B4 226 287 -5 8 1622 601 168 204 0 chrX 135973642 135973755 -30676541 + B1_Mus1 SINE Alu 1 136 -12 8 1622 386 335 82 4 chrX 135973876 135974077 -30676219 - L1MEf LINE L1 -4804 2298 2050 8 1622 371 311 63 63 chrX 135974109 135974709 -30675587 - L1MEf LINE L1 -5495 1839 1240 8 1622 376 298 70 118 chrX 135975350 135975620 -30674676 + B4 SINE B4 1 257 -35 8 1622 234 91 0 0 chrX 135975625 135975658 -30674638 + (CG)n Simple_repeat Simple_repeat 2 34 0 8 1622 519 107 0 0 chrX 135975658 135975742 -30674554 + (TG)n Simple_repeat Simple_repeat 2 85 0 8 1622 1103 62 7 40 chrX 135975797 135975949 -30674347 + B1_Mus1 SINE Alu 2 148 0 8 1622 216 0 0 0 chrX 135975950 135975974 -30674322 + (TAAAAA)n Simple_repeat Simple_repeat 5 28 0 8 1622 621 311 7 7 chrX 135975983 135976106 -30674190 + B3A SINE B2 2 124 -74 8 1622 1439 104 29 34 chrX 135976106 135976344 -30673952 - RLTR13D5 LTR ERVK 0 1023 787 8 1622 1038 61 0 13 chrX 135976362 135976537 -30673759 - L1Md_F2 LINE L1 0 6582 6413 8 1622 5385 54 65 10 chrX 135976538 135977265 -30673031 - RLTR13D5 LTR ERVK -256 767 1 8 1622 380 283 84 7 chrX 135977265 135977358 -30672938 + B3A SINE B2 109 216 0 8 1622 316 270 112 26 chrX 135977461 135977765 -30672531 - L1MA9 LINE L1 -188 6124 5795 8 1622 280 250 71 0 chrX 135977914 135978026 -30672270 + L1M3 LINE L1 4760 4879 -1261 8 1622 1154 252 126 0 chrX 135978026 135978328 -30671968 + MTE2b LTR MaLR 40 379 0 8 1622 233 281 15 15 chrX 135978336 135978473 -30671823 - L1M2 LINE L1 -3098 3042 2906 8 1622 676 198 72 6 chrX 135978704 135978865 -30671431 + B3 SINE B2 1 176 -22 8 1622 22 56 0 0 chrX 135979289 135979325 -30670971 + AT_rich Low_complexity Low_complexity 1 36 0 8 1622 370 287 79 43 chrX 135980025 135980152 -30670144 + L1ME2 LINE L1 5736 5862 -302 8 1622 251 0 59 0 chrX 135980152 135980186 -30670110 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 8 1622 370 287 79 43 chrX 135980186 135980222 -30670074 + L1ME2 LINE L1 5863 5904 -260 8 1622 1176 269 130 3 chrX 135981191 135981560 -30668736 - MTD LTR MaLR 0 419 4 8 1622 359 268 89 44 chrX 135981709 135981889 -30668407 + B3A SINE B2 5 192 -6 8 1622 429 226 103 0 chrX 135981902 135982048 -30668248 + L1MA4 LINE L1 5738 5898 -402 8 1622 875 280 50 131 chrX 135982081 135982577 -30667719 + L1M2 LINE L1 3007 3510 -2633 8 1622 3737 117 20 7 chrX 135982577 135983130 -30667166 - Lx4A LINE L1 0 7058 6499 8 1622 875 280 50 131 chrX 135983130 135983154 -30667142 + L1M2 LINE L1 3511 3532 -2611 8 1622 288 0 0 0 chrX 135983154 135983186 -30667110 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 1622 570 15 0 0 chrX 135983186 135983252 -30667044 + (GA)n Simple_repeat Simple_repeat 2 68 0 8 1622 439 108 0 0 chrX 135983252 135983317 -30666979 - B2_Mm2 SINE B2 -130 65 1 8 1622 875 280 50 131 chrX 135983317 135983666 -30666630 + L1M2 LINE L1 3533 3866 -2277 8 1622 357 335 138 5 chrX 135983697 135983782 -30666514 - L1M5 LINE L1 -425 5739 5651 8 1622 528 59 0 0 chrX 135983782 135983850 -30666446 + (CTG)n Simple_repeat Simple_repeat 1 68 0 8 1622 357 336 133 8 chrX 135983850 135984021 -30666275 - L1M5 LINE L1 -534 5650 5457 8 1622 603 295 0 0 chrX 135984533 135984662 -30665634 + RSINE1 SINE B4 2 130 -35 8 1622 311 299 95 27 chrX 135984662 135984810 -30665486 - L1MEc LINE L1 -5627 773 616 8 1622 324 0 0 0 chrX 135984848 135984884 -30665412 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 1622 530 257 13 32 chrX 135986572 135986729 -30663567 - Lx9 LINE L1 -664 6980 6827 8 1622 418 165 0 81 chrX 135986697 135986796 -30663500 + Lx9 LINE L1 6609 6699 -945 8 1622 474 18 0 0 chrX 135986815 135986870 -30663426 + (CTA)n Simple_repeat Simple_repeat 2 56 0 8 1622 204 40 0 0 chrX 135986870 135986894 -30663402 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 1622 568 307 0 7 chrX 135986896 135987047 -30663249 - RSINE1 SINE B4 -6 159 10 8 1622 2432 89 78 10 chrX 135987242 135987627 -30662669 - IAPLTR2a LTR ERVK 0 411 1 8 1622 601 258 0 0 chrX 135987680 135987800 -30662496 - B3A SINE B2 -78 120 1 8 1622 410 335 39 22 chrX 135988244 135988424 -30661872 - MLT1J-int LTR MaLR -931 456 274 8 1622 6443 69 3 13 chrX 135988440 135989293 -30661003 - Lx3_Mus LINE L1 0 7009 6165 8 1622 1407 79 9 0 chrX 135989293 135989508 -30660788 + Lx3_Mus LINE L1 5955 6171 -838 8 1622 721 340 29 45 chrX 135991310 135991618 -30658678 + RLTR18 LTR ERVK 5 307 -309 8 1622 709 283 50 133 chrX 135991596 135991988 -30658308 + RLTR18 LTR ERVK 140 604 -12 8 1622 39098 11 1 6 chrX 135992293 135998703 -30651593 - L1Md_A LINE L1 0 6582 208 8 1622 421 254 116 53 chrX 135998698 135998923 -30651373 - L1MEg LINE L1 -5337 747 509 8 1622 326 285 9 17 chrX 135999194 135999296 -30651000 - B1_Mur1 SINE Alu -2 147 13 8 1622 5784 28 0 0 chrX 135999297 136000000 -30650296 + L1Md_A LINE L1 5835 6537 -45 8 1622 293 22 0 0 chrX 136000000 136000045 -30650251 + L1Md_T LINE L1 6538 6582 0 1 1622 351 136 0 0 chrX 136000165 136000224 -30650072 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 1622 375 105 0 0 chrX 136000223 136000280 -30650016 + (GGGAGA)n Simple_repeat Simple_repeat 4 60 0 3 1622 198 348 78 0 chrX 136000360 136000475 -30649821 - MIRb SINE MIR -71 197 74 4 1622 468 0 0 0 chrX 136000566 136000618 -30649678 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1622 1154 81 0 0 chrX 136000911 136001059 -30649237 + B1_Mus1 SINE Alu 1 148 0 6 1622 201 139 0 0 chrX 136001059 136001102 -30649194 + (TAAAA)n Simple_repeat Simple_repeat 4 46 0 7 1622 745 281 23 69 chrX 136001284 136001590 -30648706 + B4A SINE B4 1 292 0 8 1622 227 221 162 0 chrX 136001977 136002045 -30648251 - L1M5 LINE L1 -671 5773 5695 9 1622 285 98 0 0 chrX 136002266 136002307 -30647989 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 1622 345 332 71 88 chrX 136002368 136002665 -30647631 + ORR1D2 LTR MaLR 11 302 -68 1 1622 745 191 80 53 chrX 136002960 136003148 -30647148 + MTD LTR MaLR 220 412 -7 1 1622 267 342 51 21 chrX 136003208 136003369 -30646927 + RSINE1 SINE B4 3 172 -120 1 1622 402 21 0 0 chrX 136003489 136003536 -30646760 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 1 1622 198 0 0 0 chrX 136003787 136003809 -30646487 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1622 648 268 0 16 chrX 136003826 136003955 -30646341 - RSINE1 SINE B4 -36 129 3 1 1622 557 300 134 10 chrX 136003956 136004158 -30646138 - B4 SINE B4 -65 227 1 1 1622 26 0 0 0 chrX 136004205 136004231 -30646065 + AT_rich Low_complexity Low_complexity 1 26 0 1 1622 516 321 30 7 chrX 136004233 136004368 -30645928 + RSINE1 SINE B4 18 155 -10 1 1622 1917 118 15 43 chrX 136004561 136004888 -30645408 + ORR1A3 LTR MaLR 1 318 -8 2 1622 366 132 60 0 chrX 136005273 136005356 -30644940 + Lx4A LINE L1 6971 7058 0 2 1622 1800 231 78 89 chrX 136005463 136005868 -30644428 + Lx9 LINE L1 6176 6579 -1065 2 1622 1907 110 124 3 chrX 136005868 136006159 -30644137 - ORR1A3 LTR MaLR 0 326 1 2 1622 1800 231 78 89 chrX 136006159 136006381 -30643915 + Lx9 LINE L1 6580 6796 -848 2 1622 2616 197 52 5 chrX 136006382 136006944 -30643352 + Lx9 LINE L1 7026 7613 -31 2 1622 231 250 64 106 chrX 136007000 136007094 -30643202 + ID_B1 SINE B4 134 223 -1 2 1622 225 65 0 0 chrX 136007145 136007176 -30643120 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1622 245 295 144 30 chrX 136007253 136007391 -30642905 + MIRm SINE MIR 21 159 -117 2 1622 691 217 16 0 chrX 136007502 136007631 -30642665 - B3 SINE B2 -2 214 84 2 1622 2953 53 25 0 chrX 136007631 136008101 -30642195 - L1_Mus2 LINE L1 -639 5927 5449 2 1622 4023 65 2 37 chrX 136008101 136008646 -30641650 + L1_Mus2 LINE L1 6035 6560 -6 2 1622 544 216 0 0 chrX 136008647 136008744 -30641552 - B3 SINE B2 -114 102 6 2 1622 23 0 0 0 chrX 136008748 136008771 -30641525 + AT_rich Low_complexity Low_complexity 1 23 0 2 1622 819 281 14 5 chrX 136009209 136009420 -30640876 + B3 SINE B2 2 214 -2 3 1622 540 274 44 0 chrX 136009910 136010045 -30640251 - B1_Mur3 SINE Alu -8 141 1 3 1622 243 0 0 0 chrX 136010224 136010251 -30640045 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1622 604 264 67 40 chrX 136010260 136010410 -30639886 - B4 SINE B4 -20 272 119 3 1622 22 0 0 0 chrX 136010416 136010438 -30639858 + AT_rich Low_complexity Low_complexity 1 22 0 3 1622 1464 6 0 0 chrX 136010595 136010760 -30639536 + (TCTCCC)n Simple_repeat Simple_repeat 4 168 0 3 1622 351 0 0 0 chrX 136010773 136010812 -30639484 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 3 1622 1252 57 0 0 chrX 136010813 136010970 -30639326 - B2_Mm2 SINE B2 -37 158 2 3 1622 1722 94 0 4 chrX 136011349 136011584 -30638712 - ORR1A2 LTR MaLR -93 234 1 3 1622 588 29 0 0 chrX 136011612 136011682 -30638614 + (TC)n Simple_repeat Simple_repeat 1 70 0 3 1622 351 0 0 0 chrX 136011682 136011720 -30638576 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1622 5049 98 101 1 chrX 136011924 136012667 -30637629 - Lx LINE L1 -1 6653 5837 4 1622 984 171 0 12 chrX 136012822 136012994 -30637302 - MTC LTR MaLR -7 414 245 4 1622 619 257 63 24 chrX 136013040 136013247 -30637049 + ID_B1 SINE B4 3 217 -7 4 1622 1476 199 98 3 chrX 136013262 136013609 -30636687 + Lx5 LINE L1 6671 7050 0 4 1622 1176 48 7 0 chrX 136013856 136014002 -30636294 - B1_Mus1 SINE Alu 0 148 2 4 1622 196 289 39 26 chrX 136014360 136014438 -30635858 - MIRb SINE MIR 0 268 190 4 1622 207 0 0 0 chrX 136014981 136015004 -30635292 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1622 320 277 17 26 chrX 136015726 136015841 -30634455 + PB1D7 SINE Alu 6 119 -1 4 1622 378 0 0 0 chrX 136016100 136016142 -30634154 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1622 246 319 0 0 chrX 136016736 136016805 -30633491 - ID SINE ID -153 71 3 5 1622 339 269 26 52 chrX 136017651 136017804 -30632492 - L1M5 LINE L1 -471 5653 5505 5 1622 252 303 0 43 chrX 136017855 136017924 -30632372 - tRNA-Ala-GCY_ tRNA tRNA -7 68 3 5 1622 331 159 32 0 chrX 136018320 136018383 -30631913 - ID_B1 SINE B4 -58 166 102 5 1622 245 279 14 14 chrX 136018502 136018571 -30631725 - RSINE1 SINE B4 -29 136 68 5 1622 272 244 167 24 chrX 136018618 136018702 -30631594 - PB1D10 SINE Alu -21 96 1 5 1622 819 243 44 11 chrX 136018739 136018922 -30631374 - B3 SINE B2 -1 215 27 5 1622 2141 246 63 18 chrX 136018962 136019248 -30631048 - Lx5 LINE L1 -3 7047 6745 5 1622 450 0 0 0 chrX 136019248 136019298 -30630998 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 1622 2141 238 36 10 chrX 136019298 136019593 -30630703 - Lx5 LINE L1 -578 6882 6455 5 1622 1405 246 91 16 chrX 136019605 136020128 -30630168 + Lx5 LINE L1 5960 6736 -724 5 1622 312 305 29 19 chrX 136020133 136020251 -30630045 - B3A SINE B2 -74 121 1 6 1622 395 288 48 43 chrX 136020251 136020410 -30629886 - MER58A DNA MER1_type -74 267 46 6 1622 339 310 92 55 chrX 136020379 136020471 -30629825 - ID_B1 SINE B4 -54 170 72 6 1622 387 0 0 0 chrX 136020471 136020514 -30629782 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1622 486 0 0 0 chrX 136020514 136020567 -30629729 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 1622 339 310 92 55 chrX 136020567 136020637 -30629659 - ID SINE ID -153 71 2 6 1622 389 269 8 65 chrX 136020648 136020771 -30629525 - PB1 SINE Alu -7 120 5 6 1622 3490 187 56 4 chrX 136020815 136021491 -30628805 + Lx5 LINE L1 6332 7042 -8 6 1622 25 0 0 0 chrX 136021491 136021516 -30628780 + AT_rich Low_complexity Low_complexity 1 25 0 6 1622 355 252 132 78 chrX 136021525 136021654 -30628642 + B4 SINE B4 4 139 -153 6 1622 441 0 0 0 chrX 136021997 136022046 -30628250 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1622 843 309 60 34 chrX 136022047 136022312 -30627984 - B4 SINE B4 -20 272 1 7 1622 7256 94 20 1 chrX 136022453 136023775 -30626521 - Lx LINE L1 -6 6648 5301 7 1622 2566 103 36 44 chrX 136023910 136024421 -30625875 + Lx2 LINE L1 6062 6997 0 7 1622 242 283 0 0 chrX 136024479 136024532 -30625764 - B4 SINE B4 -4 288 236 7 1622 743 246 134 0 chrX 136024535 136024714 -30625582 - B3 SINE B2 -13 203 1 7 1622 315 303 0 0 chrX 136024774 136024850 -30625446 - ID4_ SINE ID -6 77 2 7 1622 264 234 180 142 chrX 136024931 136025103 -30625193 + Charlie1 DNA MER1_type 2526 2730 -51 7 1622 761 189 23 0 chrX 136025103 136025235 -30625061 + B1_Mus2 SINE Alu 4 138 -9 7 1622 264 234 180 142 chrX 136025235 136025301 -30624995 + Charlie1 DNA MER1_type 2731 2773 -8 7 1622 279 340 129 5 chrX 136026085 136026286 -30624010 - L2a LINE L2 -155 3271 3046 7 1622 186 43 0 0 chrX 136026497 136026520 -30623776 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1622 538 292 34 13 chrX 136026609 136026758 -30623538 - B4 SINE B4 -44 248 97 7 1622 302 67 22 0 chrX 136026988 136027033 -30623263 + (TA)n Simple_repeat Simple_repeat 2 47 0 8 1622 1202 61 0 7 chrX 136027407 136027555 -30622741 + B1_Mus2 SINE Alu 1 147 0 8 1622 233 67 66 16 chrX 136027617 136027678 -30622618 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 8 1622 343 251 0 80 chrX 136027723 136027831 -30622465 + ID4 SINE ID 1 95 -57 8 1622 477 50 0 0 chrX 136028168 136028228 -30622068 + (TA)n Simple_repeat Simple_repeat 2 61 0 8 1622 199 382 63 26 chrX 136028564 136028755 -30621541 + MIR SINE MIR 48 245 -17 8 1622 26 0 0 0 chrX 136030102 136030128 -30620168 + AT_rich Low_complexity Low_complexity 1 26 0 8 1622 482 275 79 20 chrX 136030194 136030346 -30619950 - RSINE1 SINE B4 -2 163 3 8 1622 22 0 0 0 chrX 136030771 136030793 -30619503 + AT_rich Low_complexity Low_complexity 1 22 0 8 1622 324 304 43 0 chrX 136030937 136031029 -30619267 + PB1D10 SINE Alu 9 104 -13 8 1622 986 96 18 6 chrX 136031029 136031196 -30619100 + (GAAA)n Simple_repeat Simple_repeat 3 171 0 9 1622 192 77 0 0 chrX 136031196 136031222 -30619074 + (GGGA)n Simple_repeat Simple_repeat 1 26 0 9 1622 480 35 0 0 chrX 136031227 136031285 -30619011 + (GGAA)n Simple_repeat Simple_repeat 3 60 0 9 1622 309 289 0 10 chrX 136031288 136031386 -30618910 - L1MC4 LINE L1 -231 7811 7715 9 1622 396 287 15 44 chrX 136031399 136031421 -30618875 - ID_B1 SINE B4 0 224 136 9 1622 459 319 0 0 chrX 136031421 136031540 -30618756 - B1F1 SINE Alu -29 120 2 9 1622 396 287 15 44 chrX 136031540 136031551 -30618745 - ID_B1 SINE B4 0 135 81 9 1622 490 121 0 53 chrX 136031740 136031853 -30618443 + T-rich Low_complexity Low_complexity 1 107 0 9 1622 1119 95 0 0 chrX 136031853 136032001 -30618295 - B1_Mus1 SINE Alu 0 148 1 9 1622 823 101 253 0 chrX 136032148 136032326 -30617970 - Lx2 LINE L1 0 6997 6775 9 1622 1835 99 0 14 chrX 136032324 136032601 -30617695 - Lx2 LINE L1 -352 6645 6373 9 1622 3116 122 39 0 chrX 136032602 136033111 -30617185 - L1_Mm LINE L1 -9 5874 5346 9 1622 5612 75 17 21 chrX 136033131 136034439 -30615857 - L1VL4 LINE L1 -1850 1709 420 1 1622 1233 92 40 0 chrX 136034847 136035020 -30615276 - B2_Mm2 SINE B2 -14 181 2 1 1622 259 202 115 35 chrX 136035092 136035205 -30615091 - Lx9 LINE L1 -44 7600 7479 1 1622 1161 301 72 14 chrX 136035229 136035715 -30614581 - Lx9 LINE L1 -220 7424 6911 1 1622 239 0 32 0 chrX 136035901 136035932 -30614364 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1622 3359 36 3 0 chrX 136035932 136036324 -30613972 - MTA_Mm LTR MaLR -3 393 1 1 1622 9333 27 1 2 chrX 136036324 136037423 -30612873 - MTA_Mm-int LTR MaLR 0 1098 1 1 1622 3556 20 0 0 chrX 136037423 136037819 -30612477 - MTA_Mm LTR MaLR 0 396 1 1 1622 1669 232 7 46 chrX 136038179 136038613 -30611683 + Lx6 LINE L1 7018 7434 -26 1 1622 41 21 0 0 chrX 136038613 136038661 -30611635 + AT_rich Low_complexity Low_complexity 1 48 0 1 1622 495 341 23 6 chrX 136039078 136039255 -30611041 - MER58A DNA MER1_type 0 224 45 1 1622 419 288 48 48 chrX 136039300 136039468 -30610828 - MER5B DNA MER1_type -7 171 4 1 1622 3365 23 5 8 chrX 136039983 136040380 -30609916 + MTA_Mm LTR MaLR 1 396 0 1 1622 590 232 13 96 chrX 136040557 136040591 -30609705 + B1_Mur2 SINE Alu 1 24 -125 1 1622 2595 73 2 109 chrX 136040591 136041023 -30609273 - L1_Mus2 LINE L1 0 6566 6181 1 1622 590 232 13 96 chrX 136041023 136041145 -30609151 + B1_Mur2 SINE Alu 25 144 -5 1 1622 901 252 5 0 chrX 136041916 136042126 -30608170 + B3 SINE B2 1 211 -5 1 1622 814 281 78 54 chrX 136042402 136042513 -30607783 - L1MA4 LINE L1 -398 5902 5783 1 1622 225 0 0 0 chrX 136042513 136042538 -30607758 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1622 814 281 78 54 chrX 136042538 136042942 -30607354 - L1MA4 LINE L1 -518 5782 5375 1 1622 519 31 0 0 chrX 136042950 136043015 -30607281 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1622 339 299 11 0 chrX 136043033 136043120 -30607176 - ID SINE ID -136 88 1 1 1622 818 287 48 5 chrX 136043120 136043495 -30606801 - L1MA4 LINE L1 -776 5367 4977 1 1622 1098 285 59 32 chrX 136043630 136044069 -30606227 - RMER15-int LTR ERVL -3637 1362 912 1 1622 424 197 67 17 chrX 136044169 136044288 -30606008 - L1MA4 LINE L1 -1656 4487 4363 1 1622 36 0 0 0 chrX 136044507 136044543 -30605753 + AT_rich Low_complexity Low_complexity 1 36 0 1 1622 3399 180 57 4 chrX 136044665 136045406 -30604890 - L1_Mur3 LINE L1 -6430 1282 503 1 1622 225 69 0 0 chrX 136046542 136046571 -30603725 - U2 snRNA snRNA -157 31 3 1 1622 334 293 71 31 chrX 136046684 136046811 -30603485 + MER2 DNA MER2_type 4 135 -210 1 1622 674 271 33 37 chrX 136046812 136047027 -30603269 + MER2 DNA MER2_type 79 292 -53 1 1622 26 50 0 0 chrX 136048426 136048466 -30601830 + AT_rich Low_complexity Low_complexity 1 40 0 1 1622 830 218 121 0 chrX 136049893 136050067 -30600229 - B3 SINE B2 -7 209 15 1 1622 337 260 13 0 chrX 136050067 136050144 -30600152 - MLT1C LTR MaLR -278 189 112 1 1622 364 298 74 37 chrX 136050142 136050250 -30600046 - PB1D10 SINE Alu -5 112 1 1 1622 255 236 0 0 chrX 136050250 136050304 -30599992 - MLT1C LTR MaLR -343 124 71 1 1622 573 356 112 29 chrX 136050380 136050765 -30599531 - MLT1C-int LTR MaLR -15 1356 940 1 1622 1094 161 29 24 chrX 136050857 136051067 -30599229 + ORR1B2 LTR MaLR 1 211 -156 1 1622 22 56 0 0 chrX 136051084 136051120 -30599176 + AT_rich Low_complexity Low_complexity 1 36 0 1 1622 1303 88 0 32 chrX 136051127 136051316 -30598980 + B2_Mm2 SINE B2 2 184 -11 1 1622 1319 325 94 12 chrX 136051391 136052136 -30598160 - Lx8 LINE L1 -37 7436 6631 1 1622 523 265 68 0 chrX 136052137 136052269 -30598027 + B1_Mur1 SINE Alu 1 141 -8 1 202 905 272 78 53 chrX 136052526 136053053 -30597243 - Lx8 LINE L1 -1793 5903 5332 1 1623 353 288 0 0 chrX 136053057 136053188 -30597108 - Lx8 LINE L1 -932 5211 5050 1 1623 21 0 0 0 chrX 136053598 136053619 -30596677 + AT_rich Low_complexity Low_complexity 1 21 0 1 1623 484 331 21 0 chrX 136053623 136053765 -30596531 - RSINE1 SINE B4 -4 161 17 1 1623 456 19 0 0 chrX 136054449 136054502 -30595794 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1623 225 0 0 0 chrX 136054502 136054526 -30595770 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 1623 364 37 18 18 chrX 136054614 136054669 -30595627 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1623 561 296 46 7 chrX 136054692 136054845 -30595451 - B4 SINE B4 -2 290 132 1 1623 287 309 0 12 chrX 136054833 136054915 -30595381 - B4 SINE B4 -80 212 132 1 1623 287 309 0 12 chrX 136054903 136054985 -30595311 - B4 SINE B4 -80 212 132 1 1623 690 305 10 25 chrX 136054973 136055175 -30595121 - B4 SINE B4 -80 212 14 1 1623 1469 322 68 2 chrX 136055207 136055813 -30594483 - MLT1C-int LTR MaLR -712 659 14 1 1623 5933 204 72 19 chrX 136056001 136058391 -30591905 - Lx5 LINE L1 -26 7434 4651 1 1623 1323 139 83 18 chrX 136058721 136058999 -30591297 - Lx9 LINE L1 -22 7622 7327 1 1623 3317 150 48 24 chrX 136058999 136059588 -30590708 - RMER20B LTR ERVK -24 603 1 1 1623 3918 173 14 7 chrX 136059588 136060320 -30589976 - Lx9 LINE L1 -323 7321 6585 1 1623 315 274 52 10 chrX 136060321 136060417 -30589879 - RMER15 LTR ERVL -51 524 425 1 1623 1996 141 40 83 chrX 136060413 136060808 -30589488 - RMER4B LTR ERVK -191 394 17 1 1623 251 292 11 11 chrX 136060939 136061029 -30589267 - Lx8 LINE L1 -384 7089 7000 1 1623 981 286 103 56 chrX 136061033 136061644 -30588652 - Lx9 LINE L1 -4 7640 7001 1 1623 411 256 179 0 chrX 136062059 136062227 -30588069 - Lx8 LINE L1 -459 7014 6817 1 1623 1500 279 108 2 chrX 136062280 136062754 -30587542 - Lx8 LINE L1 -742 6731 6208 1 1623 33 25 0 0 chrX 136062851 136062891 -30587405 + AT_rich Low_complexity Low_complexity 1 40 0 1 1623 1518 52 0 5 chrX 136062891 136063084 -30587212 - L1_Mus2 LINE L1 0 6566 6375 1 1623 476 276 45 0 chrX 136063141 136063275 -30587021 - RMER15-int LTR ERVL -2562 2437 2298 1 1623 2019 230 74 15 chrX 136063556 136064081 -30586215 - RMER15-int LTR ERVL -3393 1606 1051 1 1623 1650 314 78 42 chrX 136064138 136064185 -30586111 - RMER15-int LTR ERVL -4136 863 817 1 1623 2174 101 6 71 chrX 136064185 136064537 -30585759 - ORR1A4 LTR MaLR 0 329 1 1 1623 1650 314 78 42 chrX 136064537 136065302 -30584994 - RMER15-int LTR ERVL -4183 816 22 1 1623 429 345 38 35 chrX 136065424 136065685 -30584611 - Lx8 LINE L1 -180 7293 7032 1 1623 193 375 45 0 chrX 136065740 136065828 -30584468 - L2c LINE L2 -228 3159 3068 1 1623 22 56 0 0 chrX 136066136 136066172 -30584124 + AT_rich Low_complexity Low_complexity 1 36 0 1 1623 527 245 98 12 chrX 136066507 136066799 -30583497 + L1MA5 LINE L1 5965 6283 -17 1 1623 850 344 78 0 chrX 136066872 136067230 -30583066 - MER99 DNA hAT? -141 690 305 1 1623 243 170 0 0 chrX 136067760 136067807 -30582489 - Lx5 LINE L1 -3 7047 7001 1 1623 306 0 0 0 chrX 136068079 136068113 -30582183 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 1623 255 291 11 55 chrX 136068118 136068209 -30582087 - RSINE1 SINE B4 0 165 79 1 1623 1104 236 120 13 chrX 136068338 136068685 -30581611 - MTC LTR MaLR -18 401 3 1 1623 704 303 86 33 chrX 136068743 136069057 -30581239 - MTD LTR MaLR -1 420 81 1 1623 2296 149 16 5 chrX 136069390 136069767 -30580529 - RLTR14 LTR ERV1 -1 381 1 1 1623 236 333 31 31 chrX 136070053 136070149 -30580147 + MER115 DNA Tip100 418 513 -180 1 1623 508 264 90 24 chrX 136070164 136070331 -30579965 - MLT1B LTR MaLR 0 390 213 1 1623 286 219 177 15 chrX 136070343 136070473 -30579823 - L1M3 LINE L1 -562 5627 5477 1 1623 25 0 0 0 chrX 136070473 136070498 -30579798 + AT_rich Low_complexity Low_complexity 1 25 0 1 1623 304 320 55 73 chrX 136070799 136071018 -30579278 - L1MB4 LINE L1 -5234 1515 1301 1 1623 240 229 41 41 chrX 136071177 136071250 -30579046 - L1MB4 LINE L1 -5590 1159 1087 1 1623 513 286 125 41 chrX 136071367 136071830 -30578466 - L1MB4 LINE L1 -5751 856 355 1 1623 598 315 43 52 chrX 136071843 136072074 -30578222 + B4A SINE B4 8 236 -56 1 1623 235 226 0 0 chrX 136072091 136072153 -30578143 + T-rich Low_complexity Low_complexity 1 62 0 1 1623 327 229 14 0 chrX 136072265 136072335 -30577961 + B4A SINE B4 222 292 0 1 1623 471 283 86 9 chrX 136072399 136072620 -30577676 - L1MB4 LINE L1 -6303 304 67 1 1623 243 88 0 0 chrX 136072737 136072771 -30577525 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1623 5050 95 25 30 chrX 136074030 136074045 -30576251 - Lx3A LINE L1 -4 6977 6967 1 1623 225 0 0 0 chrX 136074045 136074070 -30576226 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1 1623 5050 95 25 30 chrX 136074070 136074760 -30575536 - Lx3A LINE L1 -15 6966 6262 1 1623 1205 47 0 20 chrX 136074760 136074911 -30575385 + B1_Mus1 SINE Alu 1 148 0 1 1623 5050 95 25 30 chrX 136074911 136075000 -30575296 - Lx3A LINE L1 -720 6261 6186 1 1623 1739 71 0 0 chrX 136075000 136075238 -30575058 - Lx3A LINE L1 -1003 5978 5741 1 1623 413 39 0 0 chrX 136075238 136075290 -30575006 + Lx3_Mus LINE L1 5701 5752 -1257 1 1623 721 199 283 0 chrX 136075574 136075740 -30574556 - B3 SINE B2 -2 214 2 1 1623 231 203 0 0 chrX 136076139 136076203 -30574093 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 1623 1164 82 0 0 chrX 136076595 136076741 -30573555 + B1_Mus2 SINE Alu 2 147 0 1 1623 309 109 0 0 chrX 136076741 136076787 -30573509 + (A)n Simple_repeat Simple_repeat 1 46 0 1 1623 4449 37 2 11 chrX 136076841 136077388 -30572908 - L1Md_F2 LINE L1 0 6582 6041 1 1623 1155 130 16 5 chrX 136078872 136079058 -30571238 + B2_Mm2 SINE B2 2 189 -6 1 1623 252 0 0 0 chrX 136079742 136079770 -30570526 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1 1623 242 325 158 30 chrX 136080711 136080876 -30569420 - MIRb SINE MIR -45 223 38 1 1623 21 57 0 0 chrX 136081168 136081203 -30569093 + AT_rich Low_complexity Low_complexity 1 35 0 1 1623 537 258 58 0 chrX 136081375 136081495 -30568801 + B1_Mur1 SINE Alu 13 139 -10 1 1623 438 345 58 25 chrX 136081495 136081551 -30568745 - L1M5 LINE L1 -378 5746 5694 1 1623 378 0 0 0 chrX 136081551 136081593 -30568703 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1623 438 345 58 25 chrX 136081593 136081810 -30568486 - L1M5 LINE L1 -431 5693 5464 1 1623 517 312 22 0 chrX 136081887 136082025 -30568271 - RSINE1 SINE B4 -20 145 5 1 1623 724 190 245 30 chrX 136082398 136082631 -30567665 + B4 SINE B4 8 290 -2 1 1623 1126 219 48 16 chrX 136082732 136083047 -30567249 - L1MB5 LINE L1 -154 6020 5696 1 1623 266 164 0 18 chrX 136083048 136083104 -30567192 + (CATATA)n Simple_repeat Simple_repeat 6 60 0 1 1623 1053 110 7 0 chrX 136083178 136083323 -30566973 - B1_Mus1 SINE Alu -2 146 1 1 1623 5563 128 64 1 chrX 136083332 136084195 -30566101 - Lx4A LINE L1 -2 7056 6140 1 1623 353 233 22 52 chrX 136084198 136084350 -30565946 - L1MB5 LINE L1 -563 5617 5471 1 1623 385 309 75 0 chrX 136084428 136084522 -30565774 - RSINE1 SINE B4 -21 144 44 1 1623 361 209 183 17 chrX 136084522 136084697 -30565599 - L1MB5 LINE L1 -664 5516 5313 1 1623 360 38 0 0 chrX 136084963 136085016 -30565280 + L1_Mus3 LINE L1 6578 6630 -8 1 1623 2146 33 25 7 chrX 136086031 136086308 -30563988 - L1Md_F2 LINE L1 -3 6579 6298 1 1623 255 311 41 102 chrX 136086628 136086872 -30563424 - L1M4 LINE L1 -5773 872 628 1 1623 431 131 55 18 chrX 136089451 136089560 -30560736 - Lx4A LINE L1 -1 7057 6945 1 1623 832 235 107 0 chrX 136089610 136089797 -30560499 + B3 SINE B2 2 208 -8 1 1623 290 293 9 124 chrX 136090155 136090268 -30560028 - B3A SINE B2 0 198 99 1 1623 204 40 0 0 chrX 136090691 136090716 -30559580 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1623 1094 325 84 4 chrX 136090735 136091416 -30558880 - L1MB1 LINE L1 -241 5927 5162 1 1623 14714 78 2 10 chrX 136091424 136093479 -30556817 - L1_Mus2 LINE L1 0 6566 4528 2 1623 5627 35 7 4 chrX 136093479 136094165 -30556131 + L1Md_F3 LINE L1 5896 6583 -1 2 1623 14714 88 0 11 chrX 136094165 136094974 -30555322 - L1_Mus2 LINE L1 -1356 4527 3731 2 1623 505 194 12 0 chrX 136095382 136095552 -30554744 + CT-rich Low_complexity Low_complexity 1 172 0 2 1623 288 0 0 0 chrX 136095552 136095584 -30554712 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1623 219 327 38 38 chrX 136095584 136095689 -30554607 + MIR SINE MIR 38 142 -66 2 1623 25 51 0 0 chrX 136096708 136096747 -30553549 + AT_rich Low_complexity Low_complexity 1 39 0 2 1623 360 0 0 0 chrX 136097766 136097806 -30552490 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1623 261 309 115 21 chrX 136100009 136100105 -30550191 + PB1 SINE Alu 18 122 -5 2 1623 436 278 18 18 chrX 136100149 136100259 -30550037 + PB1D10 SINE Alu 1 110 -7 2 1623 271 136 85 0 chrX 136101119 136101178 -30549118 + Lx9 LINE L1 7573 7636 -8 2 1623 435 304 0 0 chrX 136101312 136101414 -30548882 - MER81 DNA AcHobo -5 109 8 2 1623 1019 282 88 3 chrX 136101436 136101777 -30548519 - MER90 LTR ERV1 -205 370 1 2 1623 517 303 98 38 chrX 136102138 136102552 -30547744 - Lx9 LINE L1 -25 7619 7089 2 1623 432 0 0 0 chrX 136102769 136102817 -30547479 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 1623 240 35 0 0 chrX 136102819 136102848 -30547448 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1623 435 150 170 0 chrX 136102848 136102948 -30547348 - Lx9 LINE L1 -152 7492 7376 2 1623 25 0 0 0 chrX 136102956 136102981 -30547315 + AT_rich Low_complexity Low_complexity 1 25 0 2 1623 572 233 52 2 chrX 136103011 136103248 -30547048 - L1M2 LINE L1 -834 5466 5209 2 1623 630 291 28 13 chrX 136103287 136103499 -30546797 - RSINE1 SINE B4 -4 220 3 2 1623 183 42 0 0 chrX 136103651 136103675 -30546621 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1623 477 279 178 32 chrX 136104469 136104654 -30545642 - ID_B1 SINE B4 -12 212 1 2 1623 210 307 117 47 chrX 136104750 136105045 -30545251 + L2c LINE L2 2482 3041 -346 2 1623 369 0 0 0 chrX 136105089 136105130 -30545166 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1623 246 312 0 0 chrX 136105243 136105307 -30544989 - B4A SINE B4 -6 286 223 2 1623 635 332 12 44 chrX 136105396 136105412 -30544884 - B4A SINE B4 -47 245 231 2 1623 1899 116 9 59 chrX 136105412 136105751 -30544545 - RLTRETN_Mm LTR ERVK 0 322 1 2 1623 635 332 12 44 chrX 136105751 136105986 -30544310 - B4A SINE B4 -62 230 2 2 1623 293 185 0 15 chrX 136106064 136106130 -30544166 + CT-rich Low_complexity Low_complexity 2 66 0 2 1623 404 346 67 53 chrX 136106155 136106515 -30543781 + L2a LINE L2 2670 3034 -385 2 1623 205 274 0 61 chrX 136106616 136106682 -30543614 + L2a LINE L2 3271 3332 -94 2 1623 1215 179 9 0 chrX 136106756 136106979 -30543317 + URR1B DNA MER1_type 1 225 0 2 1623 189 0 0 0 chrX 136107725 136107746 -30542550 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2 1623 25 0 0 0 chrX 136108066 136108091 -30542205 + AT_rich Low_complexity Low_complexity 1 25 0 2 1623 1274 226 49 0 chrX 136108123 136108411 -30541885 - Lx6 LINE L1 -8 7452 7151 2 1623 33 43 0 0 chrX 136108969 136109016 -30541280 + AT_rich Low_complexity Low_complexity 1 47 0 2 1623 1193 34 7 0 chrX 136109090 136109236 -30541060 - B1_Mus2 SINE Alu 0 147 1 2 1623 259 361 34 40 chrX 136109598 136109774 -30540522 - MIRb SINE MIR -78 190 16 2 1623 365 306 159 7 chrX 136109990 136110128 -30540168 + RSINE1 SINE B4 3 161 -4 2 1623 225 265 0 0 chrX 136110152 136110201 -30540095 + (ATG)n Simple_repeat Simple_repeat 3 51 0 2 1623 486 289 117 0 chrX 136110384 136110512 -30539784 + RSINE1 SINE B4 3 145 -20 2 1623 342 0 0 0 chrX 136110517 136110555 -30539741 + (TC)n Simple_repeat Simple_repeat 1 38 0 2 1623 216 0 0 0 chrX 136110555 136110578 -30539718 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 1623 7281 89 6 6 chrX 136110586 136111812 -30538484 - L1_Mus4 LINE L1 -6 6630 5405 2 1623 468 0 0 0 chrX 136111822 136111874 -30538422 + (TC)n Simple_repeat Simple_repeat 1 52 0 2 1623 369 0 0 0 chrX 136111874 136111914 -30538382 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1623 327 248 241 26 chrX 136113526 136113642 -30536654 + ID_B1 SINE B4 84 224 0 2 1623 551 133 48 48 chrX 136113644 136113747 -30536549 + B3 SINE B2 1 103 -113 2 1623 417 39 0 0 chrX 136113747 136113798 -30536498 + (TC)n Simple_repeat Simple_repeat 1 51 0 2 1623 29 0 0 0 chrX 136113839 136113868 -30536428 + AT_rich Low_complexity Low_complexity 1 29 0 2 1623 216 254 18 0 chrX 136113900 136113955 -30536341 - L2a LINE L2 0 3426 3371 2 1623 194 300 0 20 chrX 136114126 136114177 -30536119 + MIRb SINE MIR 83 132 -136 2 1623 8064 31 0 1 chrX 136114214 136115268 -30535028 - L1Md_F2 LINE L1 -8 6574 5522 2 1623 230 282 50 25 chrX 136115737 136115817 -30534479 - ID SINE ID -141 83 2 2 1623 839 204 47 28 chrX 136115974 136116186 -30534110 - B3 SINE B2 0 216 1 2 1623 5804 133 102 9 chrX 136116265 136117267 -30533029 - RLTR25A LTR ERVK -2 1101 7 2 1623 685 252 2 44 chrX 136117273 136117465 -30532831 + B3A SINE B2 26 210 -6 2 1623 271 299 45 27 chrX 136118664 136118774 -30531522 + MamRep434 DNA TcMar 230 341 -85 2 1623 722 252 23 83 chrX 136118795 136119011 -30531285 + B3 SINE B2 1 203 -13 2 1623 21 0 0 0 chrX 136119149 136119170 -30531126 + AT_rich Low_complexity Low_complexity 1 21 0 2 1623 411 192 12 49 chrX 136119513 136119595 -30530701 - ID2 SINE ID 0 83 5 2 1623 301 281 193 28 chrX 136119625 136119874 -30530422 + B4A SINE B4 2 291 -1 2 1623 236 298 45 45 chrX 136120334 136120422 -30529874 - ORR1E LTR MaLR -248 111 24 2 1623 5403 127 133 18 chrX 136121267 136122255 -30528041 + RLTR25A LTR ERVK 1 1101 -2 2 1623 270 0 0 0 chrX 136122455 136122485 -30527811 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 1623 213 39 0 0 chrX 136122485 136122510 -30527786 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1623 758 80 0 0 chrX 136123709 136123821 -30526475 - L1_Mus2 LINE L1 -2 6564 6453 2 1623 22 70 0 0 chrX 136123853 136123896 -30526400 + AT_rich Low_complexity Low_complexity 1 43 0 2 1623 333 264 0 0 chrX 136123906 136123993 -30526303 + (TG)n Simple_repeat Simple_repeat 2 88 0 2 1623 628 291 0 47 chrX 136124029 136124177 -30526119 - RSINE1 SINE B4 -23 142 2 2 1623 1297 159 16 8 chrX 136124396 136124644 -30525652 - L1Md_F2 LINE L1 -6 6576 6327 2 1623 2172 164 8 73 chrX 136125063 136125542 -30524754 - Lx4B LINE L1 -5 7053 6606 2 1623 659 273 130 10 chrX 136125780 136126080 -30524216 - L1MD2 LINE L1 -15 6344 6009 2 1623 314 271 5 1 chrX 136126195 136126257 -30524039 + B1F1 SINE Alu 5 67 -60 2 1623 967 88 70 12 chrX 136126257 136126429 -30523867 - L1_Mus3 LINE L1 -5 6633 6452 2 1623 308 278 109 18 chrX 136126429 136126467 -30523829 + PB1 SINE Alu 68 116 -11 2 1623 231 61 0 0 chrX 136126467 136126500 -30523796 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 2 1623 264 246 75 116 chrX 136126520 136126667 -30523629 - L1MD2 LINE L1 -313 5929 5789 2 1623 321 292 53 68 chrX 136126879 136127085 -30523211 - L1MD2 LINE L1 -697 5662 5460 2 1623 893 230 66 17 chrX 136127116 136127297 -30522999 - B3 SINE B2 -25 191 2 2 1623 379 244 0 0 chrX 136127317 136127415 -30522881 - L1MD2 LINE L1 -811 5431 5334 2 1623 261 0 0 0 chrX 136127741 136127770 -30522526 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1623 373 265 0 35 chrX 136127779 136127865 -30522431 - B3A SINE B2 -34 164 82 2 1623 1172 96 68 0 chrX 136128049 136128226 -30522070 + B2_Mm2 SINE B2 1 189 -6 2 1623 369 0 0 0 chrX 136128241 136128282 -30522014 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1623 818 252 82 23 chrX 136128903 136129208 -30521088 + L1ME1 LINE L1 5839 6161 -18 2 1623 249 33 0 0 chrX 136129217 136129247 -30521049 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 1623 401 279 279 0 chrX 136129358 136129523 -30520773 - B3 SINE B2 -5 211 1 2 1623 200 122 0 39 chrX 136129574 136129625 -30520671 + (TCTCTG)n Simple_repeat Simple_repeat 2 50 0 2 1623 404 324 18 63 chrX 136129626 136129847 -30520449 - ID_B1 SINE B4 -13 211 1 2 1623 391 257 64 7 chrX 136131450 136131591 -30518705 - Lx8 LINE L1 -60 7413 7265 2 1623 595 246 22 62 chrX 136131611 136131789 -30518507 - Lx9 LINE L1 -498 7146 6976 2 1623 2468 65 6 50 chrX 136131789 136132131 -30518165 + ORR1A2 LTR MaLR 1 327 0 2 1623 345 316 29 12 chrX 136132169 136132342 -30517954 - Lx8 LINE L1 -334 7139 6964 2 1623 2265 245 103 27 chrX 136132347 136133339 -30516957 - L1MA7 LINE L1 0 6291 5218 2 1623 800 264 74 5 chrX 136133386 136133588 -30516708 - ID_B1 SINE B4 -6 218 3 2 1623 1046 276 57 9 chrX 136133594 136134048 -30516248 - L1MA7 LINE L1 -1448 4695 4220 2 1623 699 249 0 16 chrX 136134295 136134479 -30515817 - L1MA7 LINE L1 -1951 4189 4009 2 1623 1004 98 28 0 chrX 136135037 136135180 -30515116 + B1_Mus1 SINE Alu 2 148 0 2 1623 753 144 94 0 chrX 136135198 136135379 -30514917 + Lx9 LINE L1 7446 7643 -1 2 1623 24 67 0 0 chrX 136135679 136135724 -30514572 + AT_rich Low_complexity Low_complexity 1 45 0 2 1623 286 288 68 42 chrX 136135760 136135879 -30514417 + B1F SINE Alu 25 147 -1 2 1623 708 103 7 46 chrX 136135879 136136031 -30514265 + GA-rich Low_complexity Low_complexity 1 146 0 2 1623 27 73 0 0 chrX 136136045 136136100 -30514196 + AT_rich Low_complexity Low_complexity 1 55 0 2 1623 390 42 0 0 chrX 136136150 136136198 -30514098 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1623 3414 172 65 1 chrX 136137081 136137732 -30512564 - RLTR17 LTR ERVK 0 692 1 2 1623 559 39 0 25 chrX 136137841 136137921 -30512375 + (CA)n Simple_repeat Simple_repeat 2 79 0 2 1623 416 359 79 35 chrX 136138585 136138740 -30511556 + MIRb SINE MIR 1 153 -115 2 1623 2381 43 52 7 chrX 136138740 136139045 -30511251 - L1Md_F2 LINE L1 -4 6578 6260 2 1623 416 359 79 35 chrX 136139045 136139143 -30511153 + MIRb SINE MIR 154 265 -3 2 1623 1363 265 64 6 chrX 136140790 136141150 -30509146 - MamRep605 Unknown Unknown -124 752 372 2 1623 833 264 0 0 chrX 136141312 136141479 -30508817 + B3 SINE B2 40 206 -10 2 1623 249 345 147 0 chrX 136141929 136142045 -30508251 + L2b LINE L2 3222 3354 -21 3 1623 400 342 121 27 chrX 136142055 136142428 -30507868 + L2 LINE L2 2393 2800 -619 3 1623 314 231 25 25 chrX 136142580 136142660 -30507636 - ID4_ SINE ID -3 80 1 3 1623 1287 112 37 0 chrX 136142951 136143138 -30507158 - B2_Mm2 SINE B2 0 195 2 3 1623 277 302 98 23 chrX 136143921 136144053 -30506243 - MIR SINE MIR -35 227 86 3 1623 364 280 59 29 chrX 136144066 136144202 -30506094 + B1F1 SINE Alu 1 140 -9 3 1623 208 121 0 0 chrX 136145051 136145084 -30505212 + (CTCG)n Simple_repeat Simple_repeat 2 34 0 3 1623 297 0 0 0 chrX 136146470 136146503 -30503793 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 3 1623 414 43 43 0 chrX 136146639 136146708 -30503588 + (TG)n Simple_repeat Simple_repeat 2 73 0 3 1623 388 299 55 40 chrX 136146744 136146963 -30503333 + MIRc SINE MIR 7 221 -41 3 1623 226 252 62 116 chrX 136147101 136147213 -30503083 + MIRc SINE MIR 2 107 -161 3 1623 21 0 0 0 chrX 136147668 136147689 -30502607 + AT_rich Low_complexity Low_complexity 1 21 0 3 1623 438 303 53 40 chrX 136147690 136147841 -30502455 + MIRc SINE MIR 3 155 -113 3 1623 285 295 135 85 chrX 136148568 136148709 -30501587 - B1F SINE Alu 0 149 2 3 1623 366 23 0 0 chrX 136148715 136148758 -30501538 + (TTCA)n Simple_repeat Simple_repeat 2 44 0 3 1623 451 198 54 45 chrX 136148841 136148952 -30501344 + PB1D9 SINE Alu 3 114 -6 3 1623 420 133 20 40 chrX 136149113 136149249 -30501047 + (TA)n Simple_repeat Simple_repeat 2 135 0 3 1623 261 0 0 0 chrX 136149249 136149278 -30501018 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 1623 420 133 20 40 chrX 136149278 136149290 -30501006 + (TA)n Simple_repeat Simple_repeat 2 13 0 3 1623 554 170 38 0 chrX 136150299 136150405 -30499891 - PB1D9 SINE Alu -9 111 2 3 1623 303 261 62 97 chrX 136150405 136150453 -30499843 - MT2B LTR ERVL -446 155 113 3 1623 333 239 85 8 chrX 136150999 136151117 -30499179 - RSINE1 SINE B4 -12 153 27 3 1623 539 102 169 132 chrX 136151122 136151258 -30499038 - B1_Mus1 SINE Alu -7 141 1 3 1623 246 325 8 73 chrX 136151264 136151387 -30498909 + L2b LINE L2 3032 3146 -229 3 1623 466 266 59 52 chrX 136151422 136151557 -30498739 - B1F2 SINE Alu -1 148 13 3 1623 257 128 12 93 chrX 136152837 136152891 -30497405 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 3 1623 1987 198 20 18 chrX 136152891 136153286 -30497010 - Lx4B LINE L1 -11 7047 6652 3 1623 257 128 12 93 chrX 136153286 136153317 -30496979 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 3 1623 279 0 0 0 chrX 136153318 136153349 -30496947 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1623 977 70 78 0 chrX 136153349 136153477 -30496819 - B1_Mus1 SINE Alu -9 139 2 3 1623 580 159 182 13 chrX 136153540 136153665 -30496631 + ORR1B1 LTR MaLR 183 340 -54 3 1623 785 227 9 92 chrX 136153914 136154031 -30496265 - ID_B1 SINE B4 -1 223 107 3 1623 365 0 22 0 chrX 136154031 136154076 -30496220 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1623 785 227 9 92 chrX 136154076 136154105 -30496191 - ID_B1 SINE B4 -118 106 95 3 1623 206 32 32 0 chrX 136154105 136154136 -30496160 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1623 785 227 9 92 chrX 136154136 136154216 -30496080 - ID_B1 SINE B4 -130 94 15 3 1623 679 118 45 7 chrX 136154464 136154618 -30495678 + (TA)n Simple_repeat Simple_repeat 1 160 0 3 1623 324 238 161 16 chrX 136155366 136155490 -30494806 + L1ME4a LINE L1 5980 6121 -3 3 1623 204 325 0 12 chrX 136156342 136156423 -30493873 + CT-rich Low_complexity Low_complexity 3 82 0 3 1623 564 29 0 0 chrX 136156442 136156512 -30493784 + (CTG)n Simple_repeat Simple_repeat 2 71 0 3 1623 1107 134 0 0 chrX 136156512 136156690 -30493606 + (TTC)n Simple_repeat Simple_repeat 2 180 0 3 1623 1046 110 0 0 chrX 136156690 136156836 -30493460 - B1_Mus1 SINE Alu -2 146 1 3 1623 363 303 87 89 chrX 136156850 136157266 -30493030 - MamRep1161 DNA TcMar -525 432 18 3 1623 1124 203 19 0 chrX 136157502 136157714 -30492582 - B3 SINE B2 0 216 1 3 1623 525 293 7 15 chrX 136158145 136158280 -30492016 - RMER15 LTR ERVL -156 419 286 3 1623 187 331 87 24 chrX 136158870 136158997 -30491299 + MIR SINE MIR 6 140 -122 3 1623 236 280 20 0 chrX 136159271 136159321 -30490975 + B1F1 SINE Alu 3 53 -96 3 1623 402 264 0 55 chrX 136159365 136159493 -30490803 + ID4 SINE ID 9 129 -23 3 1623 245 385 21 38 chrX 136159598 136159784 -30490512 + MIR SINE MIR 7 189 -73 3 1623 232 319 50 50 chrX 136159857 136159976 -30490320 - MER103 DNA DNA -44 122 4 3 1623 2190 64 7 0 chrX 136160189 136160484 -30489812 + L1_Mus2 LINE L1 5968 6264 -302 3 1623 3897 60 2 10 chrX 136160484 136160989 -30489307 + L1Md_F2 LINE L1 6082 6582 0 3 1623 429 20 0 0 chrX 136161045 136161095 -30489201 + (GA)n Simple_repeat Simple_repeat 2 51 0 3 1623 2245 49 18 0 chrX 136161095 136161379 -30488917 + L1_Mus2 LINE L1 6278 6566 0 3 1623 1136 51 13 6 chrX 136161893 136162051 -30488245 - L1_Mus3 LINE L1 -6 6632 6474 3 1623 591 222 38 126 chrX 136162152 136162454 -30487842 - MER44A DNA MER2_type -34 305 6 3 1623 355 356 19 12 chrX 136163036 136163198 -30487098 + MER5A1 DNA MER1_type 4 166 0 3 1623 475 17 0 0 chrX 136163276 136163334 -30486962 - L1Md_A LINE L1 -696 5886 5829 3 1623 5908 18 0 0 chrX 136163334 136164003 -30486293 + L1Md_A LINE L1 5913 6581 -1 3 1623 301 299 124 0 chrX 136164003 136164100 -30486196 + Charlie1a DNA MER1_type 66 174 -1281 3 1623 749 145 137 0 chrX 136164113 136164244 -30486052 - B1_Mur4 SINE Alu 0 150 2 3 1623 1035 263 27 21 chrX 136164385 136164715 -30485581 + Lx8 LINE L1 6922 7253 -220 3 1623 811 157 57 7 chrX 136164811 136164952 -30485344 - B1_Mur4 SINE Alu 0 150 3 3 1623 1646 249 66 36 chrX 136165090 136165669 -30484627 + Charlie1a DNA MER1_type 242 837 -618 3 1623 1057 335 7 7 chrX 136165682 136165974 -30484322 + B4 SINE B4 1 292 0 3 1623 736 248 188 12 chrX 136166065 136166537 -30483759 + Charlie1b DNA MER1_type 342 520 -3 3 1623 230 0 0 32 chrX 136166981 136167012 -30483284 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 3 1623 561 263 49 32 chrX 136167741 136167926 -30482370 + B3A SINE B2 1 188 -10 3 1623 204 333 49 12 chrX 136167961 136168043 -30482253 + MIRm SINE MIR 174 258 -18 3 1623 221 329 65 13 chrX 136168088 136168165 -30482131 - MamSINE1 SINE tRNA -206 84 4 3 1623 881 161 0 13 chrX 136168227 136168378 -30481918 + B1_Mur3 SINE Alu 1 149 0 3 1623 280 284 85 9 chrX 136168751 136168867 -30481429 + B1F1 SINE Alu 1 132 -17 3 1623 430 282 153 0 chrX 136168869 136169000 -30481296 + RSINE1 SINE B4 3 153 -12 3 1623 214 286 109 16 chrX 136169222 136169286 -30481010 + B3A SINE B2 5 74 -124 3 1623 293 274 62 10 chrX 136169231 136169327 -30480969 + ID4 SINE ID 14 114 -38 3 1623 288 137 0 0 chrX 136169706 136169757 -30480539 + (CAAA)n Simple_repeat Simple_repeat 3 53 0 3 1623 324 0 0 0 chrX 136169797 136169833 -30480463 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1623 238 325 231 21 chrX 136170078 136170320 -30479976 + Tigger15a DNA TcMar 4 296 -419 3 1623 21 0 0 0 chrX 136171085 136171106 -30479190 + AT_rich Low_complexity Low_complexity 1 21 0 3 1623 232 222 61 12 chrX 136171119 136171201 -30479095 - Lx4B LINE L1 -51 7007 6922 3 1623 516 307 73 87 chrX 136171295 136171570 -30478726 + B4 SINE B4 4 274 -18 3 1623 515 296 70 38 chrX 136171883 136172041 -30478255 + RSINE1 SINE B4 2 164 -1 3 1623 213 222 0 0 chrX 136172402 136172456 -30477840 + A-rich Low_complexity Low_complexity 1 54 0 3 1623 1039 248 64 3 chrX 136172677 136172972 -30477324 - Lx6 LINE L1 -573 6887 6575 3 1623 614 227 174 52 chrX 136172979 136173282 -30477014 + Lx6 LINE L1 7093 7397 -63 3 1623 677 297 21 42 chrX 136173511 136173704 -30476592 + B4A SINE B4 90 278 -14 3 1623 312 83 0 0 chrX 136173720 136173768 -30476528 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1623 21 0 0 0 chrX 136173804 136173825 -30476471 + AT_rich Low_complexity Low_complexity 1 21 0 3 1623 451 282 61 43 chrX 136174692 136174855 -30475441 + B3 SINE B2 46 211 -5 3 1623 1116 133 0 0 chrX 136175678 136175858 -30474438 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1623 370 216 78 10 chrX 136176267 136176370 -30473926 + B1F SINE Alu 16 125 -24 3 1623 971 145 6 17 chrX 136176433 136176608 -30473688 + URR1A DNA MER1_type 54 226 0 3 1623 217 323 42 31 chrX 136176614 136176710 -30473586 + L2c LINE L2 3285 3381 -6 3 1623 228 111 0 0 chrX 136177474 136177510 -30472786 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 3 1623 516 208 31 0 chrX 136177519 136177615 -30472681 - RSINE1 SINE B4 -63 102 4 3 1623 192 330 22 11 chrX 136177790 136177879 -30472417 + L2 LINE L2 1055 1144 -2275 3 1623 186 43 0 0 chrX 136177900 136177923 -30472373 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1623 1220 48 0 0 chrX 136177923 136178070 -30472226 - B1_Mus2 SINE Alu 0 147 1 3 1623 964 304 65 10 chrX 136178094 136178403 -30471893 - MER2 DNA MER2_type -1 344 19 3 1623 307 263 141 25 chrX 136178405 136178526 -30471770 + L2 LINE L2 1200 1334 -2085 3 1623 197 368 103 26 chrX 136178528 136178762 -30471534 + L2 LINE L2 1550 1801 -1618 3 1623 342 67 0 0 chrX 136178809 136178854 -30471442 + (TCCC)n Simple_repeat Simple_repeat 4 48 0 3 1623 261 118 78 0 chrX 136179639 136179690 -30470606 - MLT1C LTR MaLR -41 426 372 3 1623 291 54 0 0 chrX 136180047 136180084 -30470212 + (T)n Simple_repeat Simple_repeat 1 37 0 3 1623 1211 54 0 0 chrX 136180084 136180232 -30470064 - B1_Mus1 SINE Alu 0 148 1 3 1623 627 160 113 0 chrX 136180345 136180451 -30469845 + PB1D9 SINE Alu 2 119 -1 3 1623 1243 175 184 0 chrX 136181034 136181366 -30468930 - Lx9 LINE L1 -7 7637 7245 3 1623 438 20 0 0 chrX 136182005 136182056 -30468240 + (TC)n Simple_repeat Simple_repeat 1 51 0 3 1623 369 0 0 0 chrX 136182056 136182096 -30468200 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1623 694 320 26 4 chrX 136182101 136182330 -30467966 + B4A SINE B4 3 236 -56 4 1623 756 225 37 5 chrX 136182331 136182545 -30467751 + Lx9 LINE L1 7265 7485 -159 4 1623 22 0 0 0 chrX 136183106 136183128 -30467168 + AT_rich Low_complexity Low_complexity 1 22 0 4 1624 688 199 22 14 chrX 136183833 136183971 -30466325 + B1F SINE Alu 3 141 -8 4 1624 268 230 66 12 chrX 136184419 136184501 -30465795 - MTEa LTR MaLR -15 364 279 4 1624 418 258 62 31 chrX 136184886 136185078 -30465218 - L1MA9 LINE L1 -5 6307 6110 4 1624 246 259 35 11 chrX 136185121 136185232 -30465064 + L1MA9 LINE L1 5935 6047 -253 4 1624 24 32 0 0 chrX 136186063 136186094 -30464202 + AT_rich Low_complexity Low_complexity 1 31 0 4 1624 610 177 11 0 chrX 136186288 136186562 -30463734 + (CA)n Simple_repeat Simple_repeat 1 277 0 4 1624 285 140 0 0 chrX 136186576 136186633 -30463663 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1624 532 297 76 21 chrX 136186896 136187133 -30463163 + MIRb SINE MIR 5 254 -14 4 1624 609 52 0 0 chrX 136187477 136187554 -30462742 + (TC)n Simple_repeat Simple_repeat 1 77 0 4 1624 27 29 0 0 chrX 136187579 136187613 -30462683 + AT_rich Low_complexity Low_complexity 1 34 0 4 1624 897 268 140 35 chrX 136187621 136187645 -30462651 - Lx8 LINE L1 -179 7294 7277 4 1624 868 173 137 0 chrX 136187645 136187842 -30462454 + URR1B DNA MER1_type 2 225 0 4 1624 897 268 140 35 chrX 136187842 136188246 -30462050 - Lx8 LINE L1 -197 7276 6821 4 1624 593 140 68 113 chrX 136188350 136188527 -30461769 - Lx2B LINE L1 -5 6995 6827 4 1624 204 40 0 0 chrX 136188543 136188568 -30461728 + (CG)n Simple_repeat Simple_repeat 1 25 0 4 1624 369 0 0 0 chrX 136188568 136188608 -30461688 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1624 429 20 0 0 chrX 136188608 136188657 -30461639 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 1624 1306 212 0 4 chrX 136188910 136189151 -30461145 - 7SK RNA RNA -83 248 9 4 1624 1114 62 7 0 chrX 136189658 136189804 -30460492 - B1_Mus2 SINE Alu 0 147 1 4 1624 234 309 44 0 chrX 136190105 136190173 -30460123 - MIRb SINE MIR -16 252 182 4 1624 239 360 45 3 chrX 136190837 136190967 -30459329 - MIRb SINE MIR -107 161 22 4 1624 1746 268 92 31 chrX 136191166 136191744 -30458552 + Lx8 LINE L1 6648 7268 -205 4 1624 831 153 193 16 chrX 136191744 136191936 -30458360 + URR1A DNA MER1_type 1 226 0 4 1624 1746 268 92 31 chrX 136191936 136192008 -30458288 + Lx8 LINE L1 7269 7338 -135 4 1624 796 144 303 21 chrX 136192011 136192245 -30458051 + Lx4B LINE L1 6752 7051 -7 4 1624 1523 33 28 0 chrX 136192246 136192427 -30457869 - B2_Mm1a SINE B2 -7 186 1 4 1624 288 0 0 0 chrX 136192517 136192549 -30457747 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1624 590 260 99 9 chrX 136192549 136192770 -30457526 + Lx7 LINE L1 7172 7412 -284 4 1624 334 157 67 0 chrX 136192802 136192891 -30457405 + Lx8 LINE L1 7353 7447 -26 4 1624 201 39 0 0 chrX 136192916 136192942 -30457354 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 1624 966 248 54 11 chrX 136192971 136193232 -30457064 - B4A SINE B4 -18 274 3 4 1624 289 293 122 65 chrX 136193553 136193989 -30456307 + MLT1D LTR MaLR 6 505 0 4 1624 1755 117 29 7 chrX 136194267 136194542 -30455754 + Lx2 LINE L1 6716 6996 -1 4 1624 303 350 40 8 chrX 136194557 136194681 -30455615 + L1ME1 LINE L1 4486 4613 -1533 4 1624 296 348 24 97 chrX 136194869 136195076 -30455220 - RMER4A LTR ERVK -253 213 22 4 1624 530 252 0 10 chrX 136195155 136195259 -30455037 + PB1D10 SINE Alu 5 107 -10 4 1624 1552 177 171 3 chrX 136195470 136195804 -30454492 - MTD LTR MaLR -29 390 1 4 1624 948 209 43 24 chrX 136196015 136196226 -30454070 + B3 SINE B2 1 215 -1 4 1624 644 191 58 7 chrX 136196252 136196389 -30453907 + B1_Mur2 SINE Alu 5 148 -1 4 1624 360 0 0 0 chrX 136196400 136196440 -30453856 + (TAA)n Simple_repeat Simple_repeat 2 41 0 4 1624 356 256 66 12 chrX 136196443 136196605 -30453691 + L1ME1 LINE L1 5163 5330 -816 4 1624 1266 159 34 0 chrX 136196725 136196933 -30453363 + B3 SINE B2 1 215 -1 4 1624 404 197 26 0 chrX 136196996 136197072 -30453224 + B2_Mm2 SINE B2 2 79 -116 4 1624 724 303 151 31 chrX 136197117 136197850 -30452446 + L1ME1 LINE L1 5336 6156 -23 4 1624 577 61 0 0 chrX 136197895 136197977 -30452319 - L1_Mus2 LINE L1 -1 6565 6484 4 1624 450 0 0 0 chrX 136198401 136198451 -30451845 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1624 489 268 25 25 chrX 136200777 136200934 -30449362 + L1MB8 LINE L1 5630 5786 -398 4 1624 778 182 22 14 chrX 136200950 136201089 -30449207 + B1_Mur2 SINE Alu 2 141 -8 4 1624 407 287 10 19 chrX 136201135 136201238 -30449058 + PB1D10 SINE Alu 10 111 -6 4 1624 575 280 25 0 chrX 136201248 136201405 -30448891 + RSINE1 SINE B4 5 165 0 4 1624 526 231 182 0 chrX 136201517 136201638 -30448658 - ID_B1 SINE B4 -1 223 81 4 1624 353 326 29 0 chrX 136201641 136201779 -30448517 + L1MB8 LINE L1 5914 6055 -123 4 1624 724 262 73 26 chrX 136201820 136202012 -30448284 + B3 SINE B2 10 210 -6 4 1624 388 129 42 28 chrX 136202305 136202377 -30447919 - PB1D10 SINE Alu 0 117 45 4 1624 262 176 20 0 chrX 136203566 136203617 -30446679 + MER5B DNA MER1_type 4 55 -123 4 1624 372 191 42 25 chrX 136203632 136203750 -30446546 + Lx4A LINE L1 6927 7046 -12 4 1624 1213 289 91 22 chrX 136203852 136204621 -30445675 - L1MC4a LINE L1 -1 7881 7060 4 1624 756 216 65 22 chrX 136204937 136205176 -30445120 - Lx4B LINE L1 -8 7050 6724 4 1624 417 312 95 46 chrX 136205247 136205657 -30444639 - L1MC4a LINE L1 -1027 6855 6426 4 1624 482 325 10 2 chrX 136205990 136206135 -30444161 - B1F SINE Alu 0 149 3 4 1624 21 36 0 0 chrX 136207640 136207668 -30442628 + AT_rich Low_complexity Low_complexity 1 28 0 4 1624 866 241 50 31 chrX 136208322 136208549 -30441747 - Lx6 LINE L1 -179 7281 7069 4 1624 1169 68 0 0 chrX 136208576 136208723 -30441573 - B1_Mus1 SINE Alu 0 148 2 4 1624 315 366 0 90 chrX 136208773 136208917 -30441379 - B3A SINE B2 -18 180 50 4 1624 293 314 0 83 chrX 136208834 136208966 -30441330 - B4 SINE B4 -163 129 9 4 1624 810 284 48 28 chrX 136208977 136209332 -30440964 - L1MB8 LINE L1 -189 5989 5628 4 1624 351 157 0 5 chrX 136209765 136209830 -30440466 - B2_Mm2 SINE B2 -107 109 47 4 1624 1266 70 35 0 chrX 136209862 136210034 -30440262 - B2_Mm1t SINE B2 -14 179 2 4 1624 353 22 22 0 chrX 136210190 136210236 -30440060 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1624 476 286 158 18 chrX 136210253 136210417 -30439879 - B4A SINE B4 -23 269 83 4 1624 3274 36 10 0 chrX 136211160 136211552 -30438744 + MTA_Mm LTR MaLR 1 396 0 4 1624 536 250 38 0 chrX 136212524 136212684 -30437612 - MER5A1 DNA MER1_type 0 166 1 4 1624 3116 67 12 7 chrX 136213008 136213427 -30436869 - BGLII LTR ERVK 0 421 1 4 1624 194 345 126 28 chrX 136213583 136213765 -30436531 - L2 LINE L2 -808 2611 2412 4 1624 2216 93 3 61 chrX 136213908 136214253 -30436043 + ORR1A4 LTR MaLR 5 329 0 4 1624 2394 150 5 22 chrX 136214253 136214661 -30435635 + ORR1A4-int LTR MaLR 1 401 -1562 4 1624 4515 121 19 10 chrX 136214720 136215412 -30434884 - Lx3C LINE L1 -1 6975 6278 4 1624 8198 144 22 123 chrX 136215412 136217162 -30433134 + ORR1A4-int LTR MaLR 389 1961 -2 4 1624 1884 122 0 65 chrX 136217164 136217471 -30432825 + ORR1A4 LTR MaLR 1 287 -42 4 1624 961 211 64 4 chrX 136217471 136217704 -30432592 + Lx3C LINE L1 6728 6974 -2 4 1624 404 125 0 0 chrX 136217715 136217771 -30432525 + ORR1A4 LTR MaLR 274 329 0 4 1624 905 148 5 52 chrX 136220921 136221113 -30429183 - Lx2B LINE L1 0 7000 6818 4 1624 349 175 62 12 chrX 136221654 136221735 -30428561 - Lx4B LINE L1 -17 7041 6957 4 1624 923 155 14 0 chrX 136223626 136223774 -30426522 + B1_Mur4 SINE Alu 1 150 0 4 1624 627 108 0 0 chrX 136223775 136223868 -30426428 + (GAAAA)n Simple_repeat Simple_repeat 3 95 0 4 1624 964 205 70 20 chrX 136223988 136224187 -30426109 + B3 SINE B2 2 210 -6 4 1624 381 75 0 0 chrX 136224672 136224725 -30425571 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1624 24 0 0 0 chrX 136224948 136224972 -30425324 + AT_rich Low_complexity Low_complexity 1 24 0 4 1624 214 288 92 40 chrX 136224973 136225049 -30425247 + MIRc SINE MIR 123 202 -66 4 1624 280 290 74 121 chrX 136225782 136225836 -30424460 - L2a LINE L2 -4 3422 3384 4 1624 1084 202 34 5 chrX 136225836 136226045 -30424251 - B3 SINE B2 -1 215 1 4 1624 280 290 74 121 chrX 136226045 136226139 -30424157 - L2a LINE L2 -43 3383 3281 4 1624 184 259 115 49 chrX 136226361 136226422 -30423874 - L2c LINE L2 -65 3322 3258 4 1624 1182 68 0 0 chrX 136226566 136226713 -30423583 + B1_Mm SINE Alu 1 147 0 4 1624 242 138 0 44 chrX 136226713 136226781 -30423515 + A-rich Low_complexity Low_complexity 1 65 0 4 1624 1444 232 119 19 chrX 136227920 136228297 -30421999 - MTD LTR MaLR -2 417 3 4 1624 459 233 77 10 chrX 136228498 136228602 -30421694 - RSINE1 SINE B4 -35 130 20 4 1624 190 309 0 18 chrX 136228607 136228663 -30421633 - MER5B DNA MER1_type -5 173 119 4 1624 208 337 41 52 chrX 136228820 136228917 -30421379 + MER5B DNA MER1_type 79 174 -4 4 1624 1961 174 222 18 chrX 136229000 136229504 -30420792 + Lx9 LINE L1 7030 7636 -8 4 1624 641 168 84 35 chrX 136229605 136229747 -30420549 - B1_Mur2 SINE Alu 0 149 1 4 1624 273 236 0 11 chrX 136229906 136229970 -30420326 + ID4_ SINE ID 1 59 -93 4 1624 549 321 7 0 chrX 136230060 136230197 -30420099 - ID_B1 SINE B4 -8 216 79 4 1624 308 322 123 0 chrX 136230234 136230393 -30419903 - MER45A DNA Tip100 0 178 1 4 1624 238 0 0 75 chrX 136231786 136231826 -30418470 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 4 1624 1129 68 7 0 chrX 136231826 136231973 -30418323 - B1_Mus1 SINE Alu 0 148 1 4 1624 260 282 51 13 chrX 136232450 136232529 -30417767 - ID4_ SINE ID 0 83 2 4 1624 25 0 0 0 chrX 136232595 136232620 -30417676 + AT_rich Low_complexity Low_complexity 1 25 0 4 1624 700 157 268 0 chrX 136232813 136233011 -30417285 - Lx9 LINE L1 -2 7642 7392 4 1624 234 242 15 0 chrX 136233050 136233116 -30417180 - Lx7 LINE L1 -24 7672 7606 4 1624 281 335 16 169 chrX 136233167 136233279 -30417017 - B3 SINE B2 -6 210 105 5 1624 207 0 0 0 chrX 136233279 136233302 -30416994 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 5 1624 281 335 16 169 chrX 136233302 136233315 -30416981 - B3 SINE B2 -112 104 98 5 1624 587 82 31 0 chrX 136233315 136233413 -30416883 - L1_Mus3 LINE L1 0 6638 6538 5 1624 281 335 16 169 chrX 136233413 136233534 -30416762 - B3 SINE B2 -119 97 2 5 1624 311 333 112 36 chrX 136234516 136234568 -30415728 - MIR SINE MIR -3 259 201 5 1624 961 160 181 0 chrX 136234568 136234756 -30415540 + URR1A DNA MER1_type 5 226 0 5 1624 311 333 112 36 chrX 136234756 136234899 -30415397 - MIR SINE MIR -62 200 49 5 1624 852 271 128 26 chrX 136235126 136235391 -30414905 - B4 SINE B4 0 292 1 5 1624 3543 109 4 18 chrX 136236535 136237078 -30413218 - L1_Mus4 LINE L1 0 6636 6102 5 1624 790 235 38 27 chrX 136237080 136237264 -30413032 - B3 SINE B2 -30 186 1 5 1624 4772 90 3 3 chrX 136237778 136238439 -30411857 - Lx LINE L1 -4 6650 5990 5 1624 313 306 88 0 chrX 136239267 136239437 -30410859 + L1MA4A LINE L1 5754 5938 -365 5 1624 360 0 0 0 chrX 136239672 136239712 -30410584 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 1624 1118 82 0 0 chrX 136240965 136241112 -30409184 + B1_Mm SINE Alu 1 147 0 5 1624 293 268 0 0 chrX 136241413 136241469 -30408827 + tRNA-Ala-GCY_ tRNA tRNA 6 61 -14 5 1624 258 333 10 0 chrX 136241469 136241505 -30408791 + BC1_Mm scRNA scRNA 19 104 -48 5 1624 502 237 98 15 chrX 136241961 136242094 -30408202 - RSINE1 SINE B4 -20 145 2 5 1624 2216 183 10 10 chrX 136242335 136242748 -30407548 - MTC LTR MaLR -8 413 1 5 1624 353 289 0 37 chrX 136243099 136243207 -30407089 + PB1D10 SINE Alu 1 104 -13 5 1624 820 193 56 25 chrX 136243675 136243872 -30406424 + B3 SINE B2 9 211 -5 5 1624 2410 71 31 3 chrX 136243909 136244235 -30406061 - L1Md_F2 LINE L1 -13 6569 6235 5 1624 4843 33 2 0 chrX 136244235 136244806 -30405490 + L1Md_F2 LINE L1 5718 6289 -293 5 1624 535 270 14 0 chrX 136244833 136244981 -30405315 + Lx9 LINE L1 7324 7473 -171 5 1624 276 30 0 0 chrX 136245015 136245048 -30405248 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1624 942 216 30 0 chrX 136245120 136245288 -30405008 + B3 SINE B2 2 181 -17 5 1624 375 60 0 0 chrX 136245288 136245338 -30404958 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1624 804 243 65 5 chrX 136245338 136245355 -30404941 + B3A SINE B2 182 198 0 5 1624 23 54 0 0 chrX 136245356 136245393 -30404903 + AT_rich Low_complexity Low_complexity 1 37 0 5 1624 613 121 30 8 chrX 136245586 136245719 -30404577 - L1_Mus3 LINE L1 -2 6636 6501 5 1624 201 74 0 0 chrX 136246757 136246784 -30403512 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 5 1624 1180 128 123 0 chrX 136247227 136247422 -30402874 - URR1A DNA MER1_type 0 226 8 5 1624 933 208 43 14 chrX 136249202 136249412 -30400884 + B3 SINE B2 1 216 0 5 1624 416 313 72 20 chrX 136249543 136249696 -30400600 + RSINE1 SINE B4 3 163 -2 5 1624 216 0 0 0 chrX 136250334 136250358 -30399938 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1624 318 322 16 25 chrX 136250674 136250795 -30399501 - RSINE1 SINE B4 -1 164 45 5 1624 1361 147 14 0 chrX 136251585 136251803 -30398493 + URR1B DNA MER1_type 5 225 0 5 1624 300 186 151 75 chrX 136252015 136252108 -30398188 + PB1D7 SINE Alu 21 120 0 5 1624 230 312 0 0 chrX 136252109 136252173 -30398123 + ID4 SINE ID 2 65 -18 5 1624 1329 235 143 13 chrX 136252298 136252689 -30397607 - Lx8 LINE L1 -96 7377 6936 5 1624 255 61 0 0 chrX 136252689 136252722 -30397574 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1624 216 0 0 0 chrX 136252753 136252777 -30397519 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1624 189 0 0 0 chrX 136252856 136252877 -30397419 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1624 277 252 10 48 chrX 136253225 136253329 -30396967 + (CATATA)n Simple_repeat Simple_repeat 3 102 0 5 1624 458 255 104 0 chrX 136254435 136254541 -30395755 + PB1D10 SINE Alu 1 117 0 5 1624 468 291 93 53 chrX 136254562 136254810 -30395486 + L1MB7 LINE L1 4709 4978 -1168 5 1624 3516 114 65 0 chrX 136254810 136255346 -30394950 + Lx LINE L1 6081 6651 -3 5 1624 6183 53 0 3 chrX 136255342 136256114 -30394182 + L1Md_F2 LINE L1 5800 6569 -13 5 1624 468 291 93 53 chrX 136256114 136256220 -30394076 + L1MB7 LINE L1 4979 5077 -1069 5 1624 967 336 53 21 chrX 136256226 136256807 -30393489 + L1MB7 LINE L1 5331 5930 -254 5 1624 468 220 211 52 chrX 136256994 136257232 -30393064 - L1MC LINE L1 -695 5649 5366 5 1624 481 325 91 81 chrX 136257272 136257707 -30392589 - MLT1F-int LTR MaLR -603 806 387 5 1624 257 291 25 0 chrX 136257772 136257851 -30392445 + ID2 SINE ID 2 82 -1 5 1624 21 0 0 0 chrX 136258108 136258129 -30392167 + AT_rich Low_complexity Low_complexity 1 21 0 5 1624 246 222 75 25 chrX 136258168 136258288 -30392008 - Lx6 LINE L1 -5 7455 7330 5 1624 210 200 0 30 chrX 136258302 136258369 -30391927 + (TTG)n Simple_repeat Simple_repeat 2 66 0 5 1624 1303 171 5 0 chrX 136258663 136258885 -30391411 - URR1B DNA MER1_type -2 223 1 5 1624 873 96 0 0 chrX 136258958 136259083 -30391213 + (TTTTC)n Simple_repeat Simple_repeat 3 127 0 5 1624 1131 50 0 0 chrX 136259085 136259225 -30391071 - B1_Mus2 SINE Alu -6 141 2 5 1624 583 298 73 73 chrX 136260595 136260801 -30389495 - B3A SINE B2 0 216 11 5 1624 351 203 0 0 chrX 136260819 136260893 -30389403 + (TA)n Simple_repeat Simple_repeat 2 75 0 5 1624 347 250 11 45 chrX 136260987 136261075 -30389221 + B4A SINE B4 2 86 -206 5 1624 2498 83 3 0 chrX 136261589 136261915 -30388381 - ORR1A2 LTR MaLR 0 327 1 5 1624 2002 245 103 42 chrX 136261930 136262681 -30387615 - Lx6 LINE L1 -20 7440 6373 5 1624 878 116 14 0 chrX 136262697 136262835 -30387461 + B1_Mur4 SINE Alu 6 145 -5 5 1624 867 289 59 34 chrX 136262892 136263397 -30386899 - L1M4 LINE L1 -1526 4620 4103 5 1624 301 296 0 0 chrX 136263434 136263515 -30386781 - PB1 SINE Alu -28 99 19 5 1624 254 173 105 58 chrX 136263529 136263615 -30386681 - L1M4 LINE L1 -2093 4053 3964 5 1624 189 0 0 0 chrX 136263631 136263652 -30386644 + (GA)n Simple_repeat Simple_repeat 1 21 0 5 1624 495 271 19 9 chrX 136263658 136263766 -30386530 + PB1D10 SINE Alu 1 109 -8 5 1624 1185 242 102 33 chrX 136263795 136264649 -30385647 - Lx9 LINE L1 0 8142 7795 5 1624 1789 316 88 26 chrX 136264853 136265695 -30384601 - Lx8 LINE L1 -61 7412 6519 5 1624 751 328 70 12 chrX 136265881 136266211 -30384085 - Lx9 LINE L1 -5907 635 287 5 1624 180 200 0 0 chrX 136266936 136266976 -30383320 + (CATA)n Simple_repeat Simple_repeat 1 40 0 5 1624 556 312 75 98 chrX 136266981 136267368 -30382928 - MLT1A1 LTR MaLR 0 408 31 5 1624 476 211 45 27 chrX 136267465 136267577 -30382719 - PB1D7 SINE Alu -6 114 1 5 1624 295 292 28 0 chrX 136268132 136268204 -30382092 + ID4 SINE ID 9 82 -1 5 1624 460 292 173 13 chrX 136268820 136268976 -30381320 + B3 SINE B2 1 181 -35 5 1624 373 98 158 39 chrX 136268996 136269110 -30381186 - B2_Mm2 SINE B2 -6 189 47 5 1624 1034 95 27 0 chrX 136269132 136269280 -30381016 - B2_Mm2 SINE B2 -41 154 3 5 1624 226 414 47 0 chrX 136269305 136269433 -30380863 - MIR3 SINE MIR -33 175 42 5 1624 213 39 0 0 chrX 136269851 136269877 -30380419 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 1624 642 121 0 92 chrX 136269878 136269987 -30380309 - B1_Mus1 SINE Alu -12 136 38 5 1624 2668 138 26 20 chrX 136270124 136270582 -30379714 - RMER4A LTR ERVK 0 466 6 5 1624 611 253 64 12 chrX 136271891 136272063 -30378233 + B3A SINE B2 2 182 -16 5 1624 30 59 0 0 chrX 136272482 136272533 -30377763 + AT_rich Low_complexity Low_complexity 1 51 0 5 1624 1439 311 98 10 chrX 136272784 136273408 -30376888 - Lx8 LINE L1 -7 7466 6788 5 1624 492 239 177 0 chrX 136273406 136273536 -30376760 - Lx8 LINE L1 -788 6685 6533 5 1624 2201 162 60 12 chrX 136274283 136274684 -30375612 - MTC LTR MaLR 0 421 2 5 1624 355 314 153 43 chrX 136274685 136275130 -30375166 - L1MC LINE L1 -1697 4449 3956 5 1624 24 0 0 0 chrX 136275184 136275208 -30375088 + AT_rich Low_complexity Low_complexity 1 24 0 5 1624 343 330 93 54 chrX 136275257 136275427 -30374869 - L1M5 LINE L1 -2268 3878 3694 5 1624 724 235 0 7 chrX 136275427 136275577 -30374719 - B1_Mur1 SINE Alu 0 149 1 5 1624 343 330 93 54 chrX 136275577 136275685 -30374611 - L1M5 LINE L1 -2453 3693 3589 5 1624 546 312 56 7 chrX 136275965 136276107 -30374189 - RSINE1 SINE B4 -11 154 6 5 1624 726 204 194 22 chrX 136277132 136277312 -30372984 - B3 SINE B2 -5 211 1 5 1624 26 50 0 0 chrX 136279202 136279242 -30371054 + AT_rich Low_complexity Low_complexity 1 40 0 5 1624 319 271 204 27 chrX 136279428 136279614 -30370682 + Lx8 LINE L1 7255 7473 0 5 1624 324 324 0 37 chrX 136279865 136279974 -30370322 - PB1 SINE Alu -4 123 19 5 1624 207 354 40 0 chrX 136280445 136280544 -30369752 - MIR3 SINE MIR -48 160 58 5 1624 23 33 0 0 chrX 136281169 136281199 -30369097 + AT_rich Low_complexity Low_complexity 1 30 0 5 1624 306 326 73 61 chrX 136281267 136281679 -30368617 - L1ME4a LINE L1 -102 6022 5606 5 1624 21 36 0 0 chrX 136281730 136281758 -30368538 + AT_rich Low_complexity Low_complexity 1 28 0 5 1624 1575 171 52 80 chrX 136282136 136282498 -30367798 + ORR1B1 LTR MaLR 41 392 -2 5 1624 3391 163 14 14 chrX 136282500 136283140 -30367156 + ORR1B1-int LTR MaLR 1 640 -1323 5 1624 1187 172 67 60 chrX 136283178 136283435 -30366861 + MT2B LTR ERVL 1 259 -342 5 1624 400 177 0 0 chrX 136283435 136283497 -30366799 + PB1D9 SINE Alu 3 64 -56 5 1624 812 155 123 18 chrX 136283515 136283686 -30366610 + ORR1B1 LTR MaLR 122 310 -19 5 1624 534 80 0 0 chrX 136283694 136283769 -30366527 - URR1B DNA MER1_type -20 205 131 5 1624 1975 120 0 65 chrX 136283771 136284109 -30366187 + ORR1A3 LTR MaLR 3 318 -8 5 1624 828 142 0 22 chrX 136284114 136284251 -30366045 - URR1B DNA MER1_type -91 134 1 5 1624 231 0 50 25 chrX 136284385 136284425 -30365871 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 5 1624 1344 68 88 0 chrX 136287814 136288006 -30362290 + L1Md_F2 LINE L1 6374 6582 0 5 1624 305 83 0 0 chrX 136288015 136288063 -30362233 + L1_Mur1 LINE L1 3814 3861 -2025 5 1624 326 371 81 63 chrX 136289372 136289867 -30360429 - MLT1F2 LTR MaLR -55 505 2 5 1624 250 256 100 55 chrX 136290324 136290480 -30359816 - L1MC2 LINE L1 -1658 6127 5958 6 1624 527 290 41 71 chrX 136291041 136291238 -30359058 - B3A SINE B2 0 198 8 6 1624 1003 170 40 10 chrX 136291272 136291474 -30358822 - B3 SINE B2 -2 214 7 6 1624 701 238 83 21 chrX 136291552 136291737 -30358559 - B3 SINE B2 -5 211 14 6 1624 5301 97 11 67 chrX 136291737 136292588 -30357708 - RLTR13B4 LTR ERVK 0 803 1 6 1624 1683 128 4 4 chrX 136292599 136292849 -30357447 - ETnERV3-int LTR ERVK -30 5778 5529 6 1624 9264 96 47 19 chrX 136292862 136294144 -30356152 - RLTR45-int LTR ERVK -1172 6072 4762 6 1624 576 29 0 0 chrX 136294144 136294214 -30356082 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 6 1624 9264 127 55 24 chrX 136294214 136294496 -30355800 - RLTR45-int LTR ERVK -2483 4761 4598 6 1624 540 217 0 27 chrX 136294511 136294658 -30355638 - L1Md_T LINE L1 0 6582 6440 6 1624 452 289 69 64 chrX 136294722 136294825 -30355471 + MLT1A0 LTR MaLR 1 100 -265 6 1624 821 199 199 0 chrX 136294825 136295001 -30355295 + B3 SINE B2 1 211 -5 6 1624 452 258 265 38 chrX 136295001 136295206 -30355090 + MLT1A0 LTR MaLR 101 355 -10 6 1624 545 257 108 12 chrX 136295218 136295458 -30354838 - L1M3 LINE L1 -826 5314 5052 6 1624 23 54 0 0 chrX 136295482 136295519 -30354777 + AT_rich Low_complexity Low_complexity 1 37 0 6 1624 804 151 0 14 chrX 136295613 136295754 -30354542 + B1_Mur3 SINE Alu 11 149 0 6 1624 268 276 25 22 chrX 136295995 136296134 -30354162 + L1MC2 LINE L1 5919 6059 -120 6 1624 224 30 0 29 chrX 136296213 136296247 -30354049 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 6 1624 295 328 97 40 chrX 136296305 136296429 -30353867 - RSINE1 SINE B4 -34 131 1 6 1624 986 249 110 33 chrX 136296433 136296890 -30353406 - Lx7 LINE L1 0 7696 7144 6 1624 1046 117 5 50 chrX 136296891 136297090 -30353206 + Lx LINE L1 6465 6654 0 6 1624 1052 290 59 44 chrX 136297311 136297928 -30352368 - L1MB7 LINE L1 -175 5998 5375 6 1624 338 270 45 0 chrX 136297931 136298042 -30352254 + MLT1B LTR MaLR 1 116 -274 6 1624 231 111 28 0 chrX 136298118 136298154 -30352142 + (GGGAGA)n Simple_repeat Simple_repeat 6 42 0 6 1624 524 133 116 10 chrX 136298178 136298376 -30351920 + RMER17D LTR ERVK 280 498 -391 6 1624 3118 48 23 5 chrX 136298447 136298840 -30351456 - MTB LTR MaLR 0 400 1 6 1624 327 49 0 0 chrX 136298909 136298950 -30351346 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 1624 594 297 66 22 chrX 136298986 136299218 -30351078 + Lx8 LINE L1 7140 7386 -87 6 1624 1425 41 0 0 chrX 136299218 136299514 -30350782 + (GAA)n Simple_repeat Simple_repeat 1 296 0 6 1624 594 297 66 22 chrX 136299514 136299549 -30350747 + Lx8 LINE L1 7387 7423 -50 6 1624 393 263 135 0 chrX 136299745 136299834 -30350462 + MLT1B LTR MaLR 222 328 -62 6 1624 351 0 0 0 chrX 136299834 136299873 -30350423 + (TTA)n Simple_repeat Simple_repeat 1 39 0 6 1624 393 263 135 0 chrX 136299873 136299916 -30350380 + MLT1B LTR MaLR 329 371 -19 6 1624 283 247 206 73 chrX 136299950 136300265 -30350031 - L1MEg LINE L1 -753 5393 5037 6 1624 295 348 181 0 chrX 136300310 136300448 -30349848 - RSINE1 SINE B4 0 165 3 6 1624 22 35 0 0 chrX 136300477 136300506 -30349790 + AT_rich Low_complexity Low_complexity 1 29 0 6 1624 489 17 0 0 chrX 136300511 136300569 -30349727 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 1624 269 308 9 9 chrX 136301081 136301186 -30349110 - L1MA8 LINE L1 -49 6242 6138 6 1624 270 261 142 63 chrX 136301209 136301336 -30348960 - B1F SINE Alu -12 137 1 6 1624 775 230 157 19 chrX 136301603 136301865 -30348431 + L1MA7 LINE L1 5654 5951 -340 6 1624 237 265 108 0 chrX 136301960 136302062 -30348234 - L1MEg LINE L1 -4730 1512 1400 6 1624 345 24 0 0 chrX 136302073 136302115 -30348181 + (GTTTG)n Simple_repeat Simple_repeat 2 43 0 6 1624 312 289 10 10 chrX 136302300 136302398 -30347898 - PB1D10 SINE Alu -14 103 6 6 1624 607 308 0 0 chrX 136302452 136302611 -30347685 - B3A SINE B2 -38 160 2 6 1624 294 287 42 11 chrX 136302700 136302795 -30347501 + B1F SINE Alu 51 148 -1 6 1624 270 56 0 0 chrX 136302825 136302861 -30347435 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1624 335 286 82 0 chrX 136302940 136303038 -30347258 + RSINE1 SINE B4 11 116 -49 6 1624 231 329 0 40 chrX 136303447 136303523 -30346773 + ID_B1 SINE B4 146 218 -6 6 1624 313 330 73 19 chrX 136303827 136304130 -30346166 + L1MA4 LINE L1 5978 6295 -5 6 1624 517 253 38 21 chrX 136305914 136306100 -30344196 - RCHARR1 DNA MER1_type 0 974 786 6 1624 1946 279 49 19 chrX 136306302 136306971 -30343325 - RCHARR1 DNA MER1_type -175 799 111 6 1624 312 132 29 0 chrX 136306989 136307057 -30343239 - Lx7 LINE L1 -17 7679 7610 6 1624 504 0 0 0 chrX 136307065 136307121 -30343175 + (TC)n Simple_repeat Simple_repeat 1 56 0 6 1624 361 213 35 69 chrX 136307249 136307365 -30342931 - RCHARR1 DNA MER1_type -847 127 16 6 1624 460 229 83 25 chrX 136307515 136307636 -30342660 + ID_B1 SINE B4 84 211 -13 6 1624 287 254 32 0 chrX 136307683 136307746 -30342550 + polypurine Low_complexity Low_complexity 4 68 0 6 1624 2474 57 0 12 chrX 136307801 136308120 -30342176 + L1Md_F2 LINE L1 6267 6581 -1 6 1624 183 42 0 0 chrX 136308715 136308739 -30341557 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1624 1171 36 0 0 chrX 136308739 136308877 -30341419 - B1_Mus2 SINE Alu -9 138 1 6 1624 282 303 14 70 chrX 136309952 136310094 -30340202 + MIRb SINE MIR 78 211 -57 6 1624 546 293 47 16 chrX 136310377 136310568 -30339728 + B3 SINE B2 1 197 -19 6 1624 238 265 0 24 chrX 136310594 136310679 -30339617 - Lx7 LINE L1 -12 7684 7602 6 1624 237 293 50 20 chrX 136311535 136311636 -30338660 + Charlie15a DNA MER1_type 121 224 0 6 1624 353 330 31 18 chrX 136311933 136312096 -30338200 - MIRb SINE MIR -31 237 67 6 1624 498 250 70 0 chrX 136312773 136312901 -30337395 + B1F1 SINE Alu 4 140 -9 6 1624 396 0 0 0 chrX 136312901 136312945 -30337351 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 6 1624 476 111 11 0 chrX 136313813 136313903 -30336393 + (TTCCC)n Simple_repeat Simple_repeat 5 95 0 6 1624 339 154 0 0 chrX 136314365 136314430 -30335866 + CT-rich Low_complexity Low_complexity 2 66 0 6 1625 645 14 0 0 chrX 136316419 136316493 -30333803 + (TC)n Simple_repeat Simple_repeat 1 74 0 6 1625 231 212 0 0 chrX 136316761 136316841 -30333455 + (CAG)n Simple_repeat Simple_repeat 3 82 0 6 1625 376 300 8 30 chrX 136317946 136318080 -30332216 + L1ME4a LINE L1 5698 5828 -296 6 1625 185 94 31 0 chrX 136318289 136318321 -30331975 + (GAAA)n Simple_repeat Simple_repeat 4 36 0 6 1625 1618 48 14 9 chrX 136318891 136319101 -30331195 - L1_Mus2 LINE L1 0 6566 6356 6 1625 247 320 39 10 chrX 136319271 136319375 -30330921 + L3 LINE CR1 4196 4302 -187 6 1625 255 275 41 16 chrX 136320942 136321064 -30329232 + L2 LINE L2 1917 2041 -1378 6 1625 248 258 0 0 chrX 136321237 136321299 -30328997 + (TTA)n Simple_repeat Simple_repeat 2 63 0 6 1625 381 245 78 0 chrX 136321332 136321434 -30328862 - PB1D10 SINE Alu -7 110 1 6 1625 607 286 40 12 chrX 136321509 136321757 -30328539 + Charlie18a DNA MER1_type 47 301 -41 6 1625 2610 254 64 80 chrX 136322021 136322125 -30328171 + MMAR1 DNA Mariner 1 100 -1186 6 1625 795 97 0 0 chrX 136322125 136322239 -30328057 + (TTTC)n Simple_repeat Simple_repeat 2 115 0 6 1625 2610 254 64 80 chrX 136322239 136322306 -30327990 + MMAR1 DNA Mariner 101 152 -1134 6 1625 919 144 14 0 chrX 136322306 136322452 -30327844 - B1_Mur3 SINE Alu -1 148 1 6 1625 2610 254 64 80 chrX 136322452 136322477 -30327819 + MMAR1 DNA Mariner 153 165 -1121 6 1625 977 179 70 20 chrX 136322477 136322677 -30327619 - B3 SINE B2 -5 211 2 6 1625 2610 254 64 80 chrX 136322677 136323425 -30326871 + MMAR1 DNA Mariner 166 932 -354 6 1625 1062 218 83 14 chrX 136323682 136323970 -30326326 + MMAR1 DNA Mariner 978 1285 -1 6 1625 633 248 8 0 chrX 136324400 136324529 -30325767 + B1_Mur2 SINE Alu 3 132 -17 6 1625 432 0 0 0 chrX 136324601 136324649 -30325647 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 6 1625 224 250 33 0 chrX 136325007 136325067 -30325229 - MIR SINE MIR -151 111 50 6 1625 273 292 86 33 chrX 136326017 136326169 -30324127 - MIR SINE MIR -24 238 79 6 1625 234 0 0 0 chrX 136327518 136327544 -30322752 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 6 1625 285 249 54 26 chrX 136327685 136327801 -30322495 + PB1D10 SINE Alu 1 123 -26 6 1625 770 101 0 37 chrX 136327803 136327937 -30322359 + Lx2 LINE L1 6867 6995 -2 6 1625 25 31 0 0 chrX 136327937 136327969 -30322327 + AT_rich Low_complexity Low_complexity 1 32 0 6 1625 549 135 0 0 chrX 136328053 136328142 -30322154 + (GAA)n Simple_repeat Simple_repeat 1 89 0 6 1625 828 111 0 0 chrX 136328144 136328270 -30322026 + (GAAA)n Simple_repeat Simple_repeat 4 129 0 6 1625 227 196 0 164 chrX 136328272 136328339 -30321957 + RSINE1 SINE B4 104 159 -6 6 1625 1826 267 30 13 chrX 136328540 136329075 -30321221 + Charlie1a DNA MER1_type 456 999 -456 6 1625 1426 280 47 0 chrX 136329086 136329468 -30320828 - MLT1E2 LTR MaLR -3 624 225 6 1625 301 309 9 18 chrX 136330739 136330851 -30319445 + PB1D10 SINE Alu 2 112 -5 6 1625 356 267 0 0 chrX 136331264 136331350 -30318946 - L1MA6 LINE L1 -37 6263 6178 6 1625 576 188 102 20 chrX 136331364 136331515 -30318781 - B3 SINE B2 -4 212 49 6 1625 464 322 16 11 chrX 136331519 136331707 -30318589 - L1MA6 LINE L1 -165 6135 5947 6 1625 451 327 85 33 chrX 136332021 136332233 -30318063 - ID_B1 SINE B4 0 224 2 6 1625 25 31 0 0 chrX 136333620 136333652 -30316644 + AT_rich Low_complexity Low_complexity 1 32 0 6 1625 206 121 0 0 chrX 136333709 136333742 -30316554 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 6 1625 237 108 0 0 chrX 136334343 136334380 -30315916 + (GGAA)n Simple_repeat Simple_repeat 1 37 0 6 1625 243 88 0 0 chrX 136334415 136334449 -30315847 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 6 1625 473 221 57 29 chrX 136337311 136337451 -30312845 - B1F2 SINE Alu -5 144 1 6 1625 240 324 66 96 chrX 136337902 136338146 -30312150 - L2 LINE L2 -587 2832 2592 6 1625 541 224 8 33 chrX 136338146 136338266 -30312030 + PB1D10 SINE Alu 1 117 0 6 1625 240 324 66 96 chrX 136338266 136338509 -30311787 - L2 LINE L2 -828 2591 2360 6 1625 356 268 4 0 chrX 136338537 136338629 -30311667 + B1F SINE Alu 17 111 -38 6 1625 222 195 0 0 chrX 136339321 136339362 -30310934 + GA-rich Low_complexity Low_complexity 1 41 0 6 1625 394 290 93 39 chrX 136339546 136339675 -30310621 + B1F1 SINE Alu 2 137 -12 7 1625 212 362 0 15 chrX 136339704 136339836 -30310460 - L2c LINE L2 -16 3371 3242 7 1625 491 259 41 14 chrX 136339967 136340112 -30310184 + B1F SINE Alu 1 149 0 7 1625 457 284 17 103 chrX 136340219 136340451 -30309845 + B3 SINE B2 5 216 0 7 1625 306 330 84 11 chrX 136340723 136340913 -30309383 + B4A SINE B4 33 236 -56 7 1625 529 265 0 17 chrX 136340920 136341039 -30309257 + RSINE1 SINE B4 15 131 -34 7 1625 326 61 20 0 chrX 136341039 136341088 -30309208 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 1625 237 379 42 42 chrX 136341278 136341562 -30308734 - L2c LINE L2 -592 2827 2544 7 1625 797 195 119 11 chrX 136341881 136342057 -30308239 - B3 SINE B2 -6 210 16 7 1625 288 0 0 0 chrX 136342059 136342091 -30308205 + (TC)n Simple_repeat Simple_repeat 2 33 0 7 1625 211 311 9 75 chrX 136345740 136345925 -30304371 + L2a LINE L2 3222 3424 -2 7 1625 206 32 0 31 chrX 136346094 136346126 -30304170 + (TTTTTG)n Simple_repeat Simple_repeat 5 35 0 7 1625 561 179 100 43 chrX 136346130 136346270 -30304026 - B1_Mur3 SINE Alu 0 149 2 7 1625 206 279 32 52 chrX 136346338 136346438 -30303858 - MIRc SINE MIR -96 166 72 7 1625 493 38 12 60 chrX 136347867 136347951 -30302345 - L1_Mus3 LINE L1 0 6638 6559 7 1625 270 0 0 0 chrX 136350446 136350476 -30299820 + (TC)n Simple_repeat Simple_repeat 1 30 0 7 1625 324 0 0 0 chrX 136350476 136350511 -30299785 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1625 540 0 0 0 chrX 136350511 136350570 -30299726 + (GA)n Simple_repeat Simple_repeat 2 61 0 7 1625 313 209 19 142 chrX 136350572 136350678 -30299618 - ID_B1 SINE B4 -28 196 104 7 1625 473 265 98 0 chrX 136350708 136350840 -30299456 - RSINE1 SINE B4 -18 147 3 7 1625 420 245 11 0 chrX 136351767 136351861 -30298435 - PB1D10 SINE Alu -8 109 15 7 1625 1241 58 69 23 chrX 136351865 136352040 -30298256 - B2_Mm2 SINE B2 -11 184 2 7 1625 628 240 67 62 chrX 136352065 136352260 -30298036 - B3A SINE B2 0 198 3 7 1625 456 19 0 0 chrX 136352778 136352831 -30297465 + (TA)n Simple_repeat Simple_repeat 2 54 0 7 1625 227 306 35 0 chrX 136353175 136353260 -30297036 - L2a LINE L2 -3 3423 3336 7 1625 276 192 82 0 chrX 136353290 136353374 -30296922 + L2c LINE L2 3275 3386 -1 7 1625 825 329 128 22 chrX 136353543 136354184 -30296112 - L2a LINE L2 -337 3082 2374 7 1625 1373 151 0 18 chrX 136358215 136358444 -30291852 + URR1B DNA MER1_type 1 225 0 7 1625 378 0 0 0 chrX 136359871 136359913 -30290383 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1625 437 240 80 32 chrX 136360764 136360889 -30289407 + B1F1 SINE Alu 18 148 -1 7 1625 1173 48 0 7 chrX 136360948 136361095 -30289201 + B1_Mus2 SINE Alu 2 147 0 7 1625 825 242 57 50 chrX 136361967 136362249 -30288047 - B4A SINE B4 -7 285 2 7 1625 227 167 0 0 chrX 136362539 136362593 -30287703 - MLT1A LTR MaLR -252 122 69 7 1625 311 280 32 11 chrX 136362673 136362767 -30287529 + L1MB8 LINE L1 5806 5901 -277 7 1625 934 250 97 52 chrX 136362839 136363325 -30286971 - L1M4b LINE L1 -1288 5718 5196 7 1625 635 306 19 0 chrX 136363555 136363712 -30286584 + RSINE1 SINE B4 5 164 -1 7 1625 1374 266 162 27 chrX 136364168 136364946 -30285350 - L1M4b LINE L1 -5132 2202 1320 7 1625 413 336 0 0 chrX 136365012 136365119 -30285177 - RSINE1 SINE B4 -2 163 57 7 1625 240 35 0 0 chrX 136365343 136365372 -30284924 + (CATA)n Simple_repeat Simple_repeat 4 32 0 7 1625 391 352 175 14 chrX 136365726 136366075 -30284221 - L1M4b LINE L1 -6482 852 448 7 1625 300 286 36 0 chrX 136366891 136366975 -30283321 - PB1 SINE Alu -12 115 29 7 1625 546 208 104 0 chrX 136368192 136368317 -30281979 - B1_Mur1 SINE Alu 0 149 12 7 1625 260 329 0 0 chrX 136368711 136368722 -30281574 + B4 SINE B4 77 87 -205 7 1625 347 256 0 25 chrX 136368722 136368802 -30281494 + PB1D9 SINE Alu 3 80 -40 7 1625 321 26 0 0 chrX 136368803 136368841 -30281455 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1625 267 31 0 0 chrX 136369329 136369361 -30280935 + (CGAG)n Simple_repeat Simple_repeat 4 35 0 7 1625 335 237 41 10 chrX 136370555 136370653 -30279643 + B1F SINE Alu 41 141 -8 7 1625 396 0 0 0 chrX 136370758 136370802 -30279494 + (TC)n Simple_repeat Simple_repeat 1 44 0 7 1625 396 0 0 0 chrX 136370813 136370857 -30279439 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 1625 255 307 40 0 chrX 136372995 136373070 -30277226 + ID4_ SINE ID 6 83 0 7 1625 304 353 50 18 chrX 136374091 136374313 -30275983 + MIR SINE MIR 20 248 -14 7 1625 263 303 0 33 chrX 136374890 136374982 -30275314 - MIRb SINE MIR -141 127 39 7 1625 1337 279 154 75 chrX 136376485 136377320 -30272976 + L1M4c LINE L1 165 1065 -5319 7 1625 416 282 129 14 chrX 136377354 136377563 -30272733 + L1M4c LINE L1 2166 2398 -3986 7 1625 229 240 0 0 chrX 136377609 136377659 -30272637 + RSINE1 SINE B4 11 60 -105 7 1625 219 69 0 0 chrX 136377663 136377692 -30272604 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 1625 369 0 0 0 chrX 136377692 136377732 -30272564 + (TC)n Simple_repeat Simple_repeat 1 41 0 7 1625 468 0 0 0 chrX 136377732 136377783 -30272513 + (CA)n Simple_repeat Simple_repeat 1 52 0 7 1625 1159 320 65 94 chrX 136378014 136378842 -30271454 + MLT1D-int LTR MaLR 79 882 -489 7 1625 1059 121 24 104 chrX 136378856 136379106 -30271190 + Lx9 LINE L1 7414 7643 -1 7 1625 327 350 48 65 chrX 136379107 136379416 -30270880 + MLT1D-int LTR MaLR 934 1237 -252 7 1625 180 0 0 0 chrX 136379423 136379443 -30270853 + (TG)n Simple_repeat Simple_repeat 2 21 0 7 1625 974 306 43 60 chrX 136379593 136380079 -30270217 + MLT1D LTR MaLR 8 485 -20 7 1625 22 35 0 0 chrX 136380454 136380483 -30269813 + AT_rich Low_complexity Low_complexity 1 29 0 7 1625 660 126 9 0 chrX 136380515 136380626 -30269670 - Lx LINE L1 -1 6653 6542 7 1625 843 212 11 23 chrX 136380640 136380814 -30269482 - B3 SINE B2 -44 172 1 7 1625 653 75 11 0 chrX 136380869 136380963 -30269333 - B1_Mur4 SINE Alu -2 148 54 7 1625 302 312 13 113 chrX 136381458 136381488 -30268808 - ID_B1 SINE B4 -3 221 82 7 1625 384 325 40 0 chrX 136381488 136381614 -30268682 - B1F SINE Alu -18 131 1 7 1625 554 308 13 57 chrX 136381675 136381902 -30268394 + ID_B1 SINE B4 3 219 -5 7 1625 457 30 0 0 chrX 136381903 136381970 -30268326 + L1_Mus3 LINE L1 6571 6637 -1 7 1625 829 241 43 10 chrX 136381993 136382202 -30268094 + B3 SINE B2 1 216 0 7 1625 1518 58 0 11 chrX 136382420 136382611 -30267685 + B2_Mm2 SINE B2 2 190 -5 7 1625 682 217 7 7 chrX 136383341 136383485 -30266811 + B1_Mur4 SINE Alu 1 144 -6 7 1625 215 355 73 42 chrX 136385146 136385337 -30264959 - MIRc SINE MIR -17 251 55 7 1625 1126 119 53 21 chrX 136385350 136385538 -30264758 - B2_Mm2 SINE B2 -1 194 1 7 1625 5698 50 17 1 chrX 136385562 136386261 -30264035 - L1Md_F2 LINE L1 -11 6571 5862 7 1625 243 0 0 0 chrX 136386745 136386772 -30263524 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1625 615 222 0 36 chrX 136386866 136387006 -30263290 - B1_Mus2 SINE Alu -12 135 1 7 1625 24 32 0 0 chrX 136388529 136388560 -30261736 + AT_rich Low_complexity Low_complexity 1 31 0 7 1625 610 236 71 0 chrX 136388563 136388690 -30261606 + B1F1 SINE Alu 1 136 -13 7 1625 21 36 0 0 chrX 136388699 136388727 -30261569 + AT_rich Low_complexity Low_complexity 1 28 0 7 1625 372 97 0 0 chrX 136390032 136390094 -30260202 + (TC)n Simple_repeat Simple_repeat 2 63 0 7 1625 252 122 0 0 chrX 136390095 136390136 -30260160 + (TA)n Simple_repeat Simple_repeat 2 42 0 7 1625 336 190 0 0 chrX 136390136 136390194 -30260102 - PB1D9 SINE Alu -62 58 1 7 1625 279 0 0 0 chrX 136390332 136390363 -30259933 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 7 1625 21 0 0 0 chrX 136390475 136390496 -30259800 + AT_rich Low_complexity Low_complexity 1 21 0 7 1625 268 280 144 0 chrX 136390905 136391037 -30259259 - MER103 DNA DNA -15 151 1 7 1625 302 208 0 94 chrX 136391223 136391237 -30259059 + MT2B LTR ERVL 182 194 -407 7 1625 207 0 0 0 chrX 136391237 136391260 -30259036 + (TA)n Simple_repeat Simple_repeat 2 24 0 7 1625 302 208 0 94 chrX 136391260 136391330 -30258966 + MT2B LTR ERVL 195 258 -343 7 1625 643 119 0 38 chrX 136391273 136391378 -30258918 + B1_Mur4 SINE Alu 50 150 0 7 1625 1285 97 0 11 chrX 136392033 136392221 -30258075 + B2_Mm2 SINE B2 9 194 -1 7 1625 27 0 0 0 chrX 136393145 136393172 -30257124 + AT_rich Low_complexity Low_complexity 1 27 0 7 1625 198 366 73 0 chrX 136394445 136394527 -30255769 - MIRm SINE MIR -30 246 159 7 1625 382 155 14 14 chrX 136396951 136397023 -30253273 - B3 SINE B2 -144 72 1 7 1625 929 311 11 0 chrX 136397199 136397472 -30252824 + B4A SINE B4 1 276 -16 7 1625 813 60 6 17 chrX 136397505 136397641 -30252655 + B1_Mus2 SINE Alu 15 148 -1 7 1625 189 94 0 0 chrX 136397646 136397678 -30252618 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 7 1625 251 200 0 0 chrX 136397810 136397855 -30252441 - B4A SINE B4 -164 128 84 7 1625 616 259 13 18 chrX 136397892 136398077 -30252219 + B3 SINE B2 2 189 -4 7 1625 226 361 76 13 chrX 136398780 136398937 -30251359 + L2c LINE L2 3217 3383 -4 7 1625 244 301 0 98 chrX 136399646 136399738 -30250558 + MT2B LTR ERVL 153 235 -366 7 1625 626 202 0 0 chrX 136399663 136399772 -30250524 + PB1D9 SINE Alu 6 114 -6 7 1625 349 242 187 24 chrX 136399772 136399786 -30250510 + B4A SINE B4 91 233 -59 7 1625 320 243 68 59 chrX 136400553 136400671 -30249625 + MLT1A1 LTR MaLR 290 408 0 7 1625 626 91 45 0 chrX 136401216 136401326 -30248970 - Lx LINE L1 -9 6645 6531 7 1625 396 0 0 0 chrX 136401645 136401689 -30248607 + (TC)n Simple_repeat Simple_repeat 1 44 0 7 1625 336 305 56 84 chrX 136402435 136402578 -30247718 - LTR75 LTR ERVL -304 258 120 8 1625 252 122 0 0 chrX 136402693 136402734 -30247562 + (GA)n Simple_repeat Simple_repeat 2 42 0 8 1625 258 288 45 0 chrX 136402795 136402861 -30247435 + ID4 SINE ID 1 69 -14 8 1625 1003 225 14 14 chrX 136402880 136403092 -30247204 + B3 SINE B2 1 212 -4 8 1625 293 331 35 28 chrX 136403405 136403548 -30246748 + MIRb SINE MIR 34 177 -91 8 1625 466 313 78 87 chrX 136403656 136404013 -30246283 + L2c LINE L2 3032 3385 -2 8 1625 588 272 14 0 chrX 136404239 136404386 -30245910 + B1_Mur1 SINE Alu 1 149 0 8 1625 456 19 0 0 chrX 136404386 136404439 -30245857 + (GGAA)n Simple_repeat Simple_repeat 3 55 0 8 1625 183 80 0 0 chrX 136404916 136404941 -30245355 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1625 372 94 0 0 chrX 136405391 136405444 -30244852 + (CACCC)n Simple_repeat Simple_repeat 3 55 0 8 1625 397 237 106 21 chrX 136406785 136406927 -30243369 - RSINE1 SINE B4 -10 155 2 8 1625 463 274 77 0 chrX 136407065 136407182 -30243114 - B4A SINE B4 -166 126 1 8 1625 707 263 48 150 chrX 136407216 136407529 -30242767 - B4 SINE B4 -1 291 11 8 1625 258 262 117 0 chrX 136407526 136407629 -30242667 - PB1D10 SINE Alu -1 116 2 8 1625 805 213 31 66 chrX 136407845 136408132 -30242164 - L1M2 LINE L1 -601 5699 5423 8 1625 388 288 21 57 chrX 136408227 136408367 -30241929 - ID_B1 SINE B4 -4 220 86 8 1625 413 302 64 78 chrX 136408527 136408746 -30241550 + RMER15 LTR ERVL 307 522 -53 8 1625 842 264 15 0 chrX 136408857 136409054 -30241242 - MER2 DNA MER2_type -9 336 137 8 1625 292 254 32 8 chrX 136409105 136409228 -30241068 + (TA)n Simple_repeat Simple_repeat 1 126 0 8 1625 186 294 126 18 chrX 136410946 136411057 -30239239 + MIR SINE MIR 22 150 -118 8 1625 181 276 151 9 chrX 136411801 136411907 -30238389 + MER5A DNA MER1_type 5 125 -64 8 1625 576 277 0 35 chrX 136412002 136412144 -30238152 - ID_B1 SINE B4 -9 215 79 8 1625 223 283 83 0 chrX 136413225 136413285 -30237011 - ID4 SINE ID -4 79 15 8 1625 267 372 44 0 chrX 136413297 136413410 -30236886 - B1F1 SINE Alu -31 118 1 8 1625 284 291 50 54 chrX 136413410 136413450 -30236846 - ID SINE ID -141 83 51 8 1625 180 0 0 0 chrX 136414171 136414191 -30236105 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 8 1625 263 238 73 16 chrX 136414203 136414327 -30235969 + L1ME2z LINE L1 6158 6288 -156 8 1625 2196 87 12 58 chrX 136414662 136415004 -30235292 + ORR1A2 LTR MaLR 2 327 0 8 1625 334 295 0 13 chrX 136415146 136415225 -30235071 - ID4_ SINE ID 0 83 6 8 1625 310 319 25 0 chrX 136415344 136415463 -30234833 + HERV16-int LTR ERVL 2759 2880 -2116 8 1625 227 409 68 19 chrX 136416165 136416327 -30233969 + LTR16A LTR ERVL 280 449 -2 8 1625 1074 266 105 35 chrX 136416422 136416730 -30233566 + Lx8 LINE L1 7014 7355 -118 8 1625 456 152 0 59 chrX 136416730 136416849 -30233447 + L1Md_F2 LINE L1 6471 6582 0 8 1625 1074 266 105 35 chrX 136416849 136416968 -30233328 + Lx8 LINE L1 7356 7471 -2 8 1625 1179 56 0 0 chrX 136417104 136417248 -30233048 + B1_Mus1 SINE Alu 3 146 -2 8 1625 450 49 0 0 chrX 136417248 136417309 -30232987 + (TAAA)n Simple_repeat Simple_repeat 2 62 0 8 1625 569 233 6 12 chrX 136418088 136418249 -30232047 - L1ME4a LINE L1 -4 6120 5961 8 1625 861 225 0 45 chrX 136418477 136418677 -30231619 + B3A SINE B2 1 191 -7 8 1625 310 108 106 24 chrX 136419280 136419365 -30230931 - Lx9 LINE L1 0 7644 7553 8 1625 207 88 0 0 chrX 136420049 136420083 -30230213 + (C)n Simple_repeat Simple_repeat 1 34 0 8 1625 197 364 0 66 chrX 136420373 136420479 -30229817 + MIRc SINE MIR 132 230 -38 8 1625 197 344 0 0 chrX 136420545 136420606 -30229690 + MIRb SINE MIR 173 233 -35 8 1625 217 324 0 18 chrX 136420957 136421067 -30229229 + (TATATG)n Simple_repeat Simple_repeat 2 109 0 8 1625 252 143 0 0 chrX 136422189 136422231 -30228065 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 8 1625 645 222 0 27 chrX 136422240 136422349 -30227947 - B1_Mur3 SINE Alu -4 145 39 8 1625 618 82 0 0 chrX 136422349 136422434 -30227862 + (TC)n Simple_repeat Simple_repeat 1 85 0 8 1625 645 222 0 27 chrX 136422434 136422472 -30227824 - B1_Mur3 SINE Alu -111 38 2 8 1625 26 50 0 0 chrX 136422853 136422893 -30227403 + AT_rich Low_complexity Low_complexity 1 40 0 8 1625 632 242 81 40 chrX 136422904 136423102 -30227194 - B3 SINE B2 -9 207 2 8 1625 196 286 57 34 chrX 136423240 136423333 -30226963 - MIR SINE MIR -60 208 114 8 1625 207 162 0 0 chrX 136423639 136423676 -30226620 + (CA)n Simple_repeat Simple_repeat 1 37 0 8 1625 547 303 65 12 chrX 136423976 136424297 -30225999 + L1ME3B LINE L1 5669 6006 -234 8 1625 400 217 11 21 chrX 136424424 136424518 -30225778 - PB1D10 SINE Alu -7 110 18 8 1625 702 333 54 59 chrX 136425078 136425588 -30224708 + L1MB8 LINE L1 371 875 -6029 8 1625 288 0 0 0 chrX 136425588 136425620 -30224676 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 8 1625 702 333 54 59 chrX 136425620 136425686 -30224610 + L1MB8 LINE L1 876 943 -5961 8 1625 366 33 16 32 chrX 136425687 136425749 -30224547 + (TTTTG)n Simple_repeat Simple_repeat 5 65 0 8 1625 896 304 28 46 chrX 136426596 136427141 -30223155 + L1MB8 LINE L1 1009 1543 -5361 8 1625 1117 140 0 41 chrX 136427165 136427359 -30222937 + B2_Mm2 SINE B2 7 192 -3 8 1625 369 0 0 0 chrX 136428227 136428268 -30222028 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 1625 730 256 185 45 chrX 136429567 136429956 -30220340 + L1MB8 LINE L1 1532 1981 -5027 8 1625 3656 99 23 2 chrX 136429956 136430473 -30219823 - Lx LINE L1 -5 6649 6122 8 1625 730 269 167 33 chrX 136430473 136430791 -30219505 + L1MB8 LINE L1 1982 2356 -4652 8 1625 679 267 87 0 chrX 136430802 136430974 -30219322 + B3 SINE B2 24 210 -6 8 1625 22 35 0 0 chrX 136431386 136431415 -30218881 + AT_rich Low_complexity Low_complexity 1 29 0 8 1625 3448 217 114 26 chrX 136431518 136432123 -30218173 + RMER1C Other Other 379 1054 -288 8 1625 3121 19 3 0 chrX 136432123 136432483 -30217813 + L1Md_F3 LINE L1 6209 6569 -15 8 1625 3448 217 114 26 chrX 136432483 136432759 -30217537 + RMER1C Other Other 1055 1338 -4 8 1625 318 50 0 0 chrX 136432819 136432859 -30217437 + (TA)n Simple_repeat Simple_repeat 2 41 0 8 1625 230 234 13 13 chrX 136432914 136432992 -30217304 + L1MB8 LINE L1 6152 6229 -805 8 1625 940 133 0 0 chrX 136433080 136433215 -30217081 + B1_Mur4 SINE Alu 1 135 -15 8 1625 287 152 13 0 chrX 136433225 136433304 -30216992 + (CCAA)n Simple_repeat Simple_repeat 4 83 0 8 1625 1014 296 82 30 chrX 136433309 136433958 -30216338 + L1MB8 LINE L1 6292 7028 -16 8 1625 3453 178 17 5 chrX 136434461 136435106 -30215190 + Lx7 LINE L1 6673 7325 -371 8 1625 591 15 0 0 chrX 136435106 136435174 -30215122 + (TG)n Simple_repeat Simple_repeat 2 69 0 8 1625 228 182 0 0 chrX 136435214 136435258 -30215038 + (TAA)n Simple_repeat Simple_repeat 2 45 0 8 1625 831 304 68 65 chrX 136435518 136435902 -30214394 + MLT1B LTR MaLR 4 388 -2 8 1625 1215 262 71 84 chrX 136436247 136437106 -30213190 - L1MB3 LINE L1 -15 6168 5321 8 1625 21 82 0 0 chrX 136437111 136437160 -30213136 + AT_rich Low_complexity Low_complexity 1 49 0 8 1625 1550 220 36 68 chrX 136437160 136437604 -30212692 - Lx6 LINE L1 -26 7434 7005 8 1625 894 260 111 44 chrX 136437666 136438117 -30212179 - L1M2 LINE L1 -863 5280 4800 8 1625 369 0 0 0 chrX 136438237 136438278 -30212018 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 1625 300 308 46 89 chrX 136438564 136438956 -30211340 + L1M5 LINE L1 5356 5730 -510 8 1625 247 355 11 11 chrX 136439170 136439264 -30211032 - B4A SINE B4 -179 113 20 8 1625 200 59 0 29 chrX 136439590 136439625 -30210671 + (TTTTTA)n Simple_repeat Simple_repeat 3 36 0 8 1625 6026 97 22 52 chrX 136439706 136440674 -30209622 + Lx3A LINE L1 6043 6981 0 8 1625 521 190 268 0 chrX 136440701 136440843 -30209453 - B3A SINE B2 -18 180 1 8 1625 288 0 0 0 chrX 136442561 136442593 -30207703 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 8 1625 2188 175 47 5 chrX 136443021 136443423 -30206873 - MTD LTR MaLR 0 419 1 8 1625 22 35 0 0 chrX 136444013 136444042 -30206254 + AT_rich Low_complexity Low_complexity 1 29 0 8 1625 200 29 114 0 chrX 136444042 136444077 -30206219 + (TTAA)n Simple_repeat Simple_repeat 3 41 0 8 1625 869 125 7 22 chrX 136444087 136444226 -30206070 - B1_Mur2 SINE Alu -1 148 12 8 1625 426 241 47 107 chrX 136444094 136444243 -30206053 - B4 SINE B4 -74 218 79 8 1625 391 271 80 88 chrX 136444266 136444517 -30205779 - L1M4 LINE L1 -546 6492 6244 8 1625 186 43 0 0 chrX 136444581 136444604 -30205692 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 1625 662 250 97 45 chrX 136444937 136445184 -30205112 + Lx8 LINE L1 7184 7443 -30 8 1625 312 302 22 117 chrX 136445254 136445328 -30204968 - L1M4 LINE L1 -795 6211 6149 8 1625 1190 54 7 0 chrX 136445328 136445475 -30204821 - B1_Mus1 SINE Alu 0 148 1 8 1625 312 302 22 117 chrX 136445475 136445580 -30204716 - L1M4 LINE L1 -858 6148 6049 8 1625 560 235 26 82 chrX 136445580 136445747 -30204549 - B1_Mur1 SINE Alu 0 149 1 8 1625 458 136 0 12 chrX 136445764 136445846 -30204450 + (TTCC)n Simple_repeat Simple_repeat 4 84 0 8 1625 633 115 62 0 chrX 136445846 136445942 -30204354 - B1_Mus2 SINE Alu 0 147 46 8 1626 240 86 0 0 chrX 136446017 136446052 -30204244 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 8 1626 5045 142 23 3 chrX 136446118 136446901 -30203395 + Lx5 LINE L1 6248 7046 -4 8 1626 271 250 33 0 chrX 136447019 136447111 -30203185 - L1M4 LINE L1 -1115 5891 5797 8 1626 884 207 7 0 chrX 136447140 136447285 -30203011 - B1_Mur2 SINE Alu -3 146 1 8 1626 228 135 0 0 chrX 136447291 136447328 -30202968 + (T)n Simple_repeat Simple_repeat 1 37 0 8 1626 450 0 0 0 chrX 136447337 136447387 -30202909 + (TA)n Simple_repeat Simple_repeat 2 51 0 8 1626 1424 112 34 13 chrX 136447388 136447624 -30202672 - Lx3_Mus LINE L1 -12 6997 6757 8 1626 234 227 10 40 chrX 136447908 136448009 -30202287 - L1M4 LINE L1 -4508 2826 2729 8 1626 446 285 111 29 chrX 136448191 136448282 -30202014 - L1M4 LINE L1 -4807 2201 2102 8 1626 3311 18 34 0 chrX 136448282 136448665 -30201631 - MTA_Mm LTR MaLR 0 396 1 8 1626 8992 40 4 1 chrX 136448665 136449760 -30200536 - MTA_Mm-int LTR MaLR 0 1098 1 8 1626 3311 18 34 0 chrX 136449760 136450143 -30200153 - MTA_Mm LTR MaLR 0 396 1 8 1626 446 288 125 22 chrX 136450143 136450498 -30199798 - L1M4 LINE L1 -4907 2101 1702 8 1626 1244 287 138 50 chrX 136450805 136451651 -30198645 - L1M4 LINE L1 -5552 1352 432 8 1626 826 201 14 0 chrX 136451940 136452084 -30198212 + B1_Mur1 SINE Alu 2 147 -2 8 1626 2312 134 86 5 chrX 136452125 136452507 -30197789 + MTC LTR MaLR 1 413 -8 8 1626 969 131 128 13 chrX 136452752 136452945 -30197351 - B2_Mm1a SINE B2 0 195 1 9 1626 4045 203 14 4 chrX 136452971 136453728 -30196568 - Lx5 LINE L1 -5 7045 6281 9 1626 832 283 144 13 chrX 136453761 136454212 -30196084 - L1_Mur3 LINE L1 -87 5793 5284 9 1626 218 22 20 80 chrX 136454221 136454271 -30196025 + (TTAA)n Simple_repeat Simple_repeat 3 49 0 9 1626 3939 166 51 48 chrX 136454278 136455118 -30195178 - Lx5 LINE L1 -3 7047 6205 9 1626 316 245 30 50 chrX 136455176 136455275 -30195021 - B2_Mm1t SINE B2 -85 108 12 9 1626 2750 136 62 12 chrX 136455275 136455976 -30194320 + Lx5 LINE L1 5378 6110 -940 9 1626 408 293 99 24 chrX 136456067 136456280 -30194016 - Lx8 LINE L1 -6 7467 7239 9 1626 8036 32 2 4 chrX 136456280 136457427 -30192869 - L1Md_F2 LINE L1 0 6582 5439 9 1626 1054 325 53 20 chrX 136457469 136457974 -30192322 - Lx8 LINE L1 -249 7224 6703 9 1626 1044 111 21 0 chrX 136458259 136458403 -30191893 + B1_Mus2 SINE Alu 1 147 0 9 1626 355 245 167 0 chrX 136459008 136459110 -30191186 - PB1D9 SINE Alu 0 120 2 9 1626 257 268 0 14 chrX 136459487 136459559 -30190737 + ID4 SINE ID 2 72 -11 9 1626 387 211 10 31 chrX 136459757 136459855 -30190441 + L1M4 LINE L1 4849 4944 -1202 9 1626 442 305 128 29 chrX 136460402 136460574 -30189722 + B3 SINE B2 1 189 -27 9 1626 339 320 72 28 chrX 136460602 136460782 -30189514 + B3A SINE B2 11 198 0 9 1626 4732 77 120 1 chrX 136461606 136462272 -30188024 - L1_Mus3 LINE L1 -12 6626 5882 9 1626 250 306 16 0 chrX 136462610 136462672 -30187624 + ID4_ SINE ID 21 83 0 9 1626 1454 229 20 91 chrX 136462979 136463387 -30186909 + MTE2a LTR MaLR 1 379 0 9 1626 376 286 43 61 chrX 136463418 136463582 -30186714 - MTEa LTR MaLR -15 364 204 9 1626 1713 146 90 84 chrX 136463553 136463898 -30186398 + ORR1C1 LTR MaLR 32 378 0 9 1626 872 244 95 43 chrX 136463898 136464124 -30186172 - MTEa LTR MaLR -139 240 3 9 1626 446 289 50 59 chrX 136464134 136464373 -30185923 - L1M1 LINE L1 -583 5720 5484 9 1626 333 333 126 32 chrX 136464373 136464701 -30185595 - L1M5 LINE L1 -1120 5026 4663 9 1626 1342 221 113 9 chrX 136464708 136465036 -30185260 - MTC LTR MaLR -26 395 34 9 1626 350 253 153 51 chrX 136465058 136465146 -30185150 - L1M5 LINE L1 -1473 4673 4581 9 1626 332 22 22 0 chrX 136465146 136465191 -30185105 + (TA)n Simple_repeat Simple_repeat 1 46 0 9 1626 350 253 153 51 chrX 136465191 136465298 -30184998 - L1M5 LINE L1 -1566 4580 4458 9 1626 22 35 0 0 chrX 136465299 136465328 -30184968 + AT_rich Low_complexity Low_complexity 1 29 0 9 1626 617 335 6 18 chrX 136465351 136465515 -30184781 - RSINE1 SINE B4 -1 164 3 9 1626 25 51 0 0 chrX 136465591 136465630 -30184666 + AT_rich Low_complexity Low_complexity 1 39 0 9 1626 491 298 18 0 chrX 136465742 136465910 -30184386 - Tigger7 DNA MER2_type -28 2463 2293 9 1626 663 224 79 36 chrX 136465916 136466055 -30184241 - B1_Mur2 SINE Alu -2 145 1 9 1626 402 21 0 0 chrX 136466173 136466220 -30184076 + (TA)n Simple_repeat Simple_repeat 2 48 0 9 1626 1238 286 56 6 chrX 136466405 136466764 -30183532 - Tigger7 DNA MER2_type -2082 409 33 9 1626 312 91 0 0 chrX 136467691 136467735 -30182561 + (GGA)n Simple_repeat Simple_repeat 2 45 0 9 1626 249 336 9 26 chrX 136467744 136467860 -30182436 + GA-rich Low_complexity Low_complexity 1 114 0 9 1626 1905 223 159 4 chrX 136468033 136468401 -30181895 - RMER15 LTR ERVL -2 573 147 9 1626 429 20 0 0 chrX 136468401 136468451 -30181845 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 1626 1905 223 159 4 chrX 136468451 136468560 -30181736 - RMER15 LTR ERVL -429 146 23 9 1626 2738 305 47 15 chrX 136468720 136469767 -30180529 - Lx8 LINE L1 -138 7335 6256 9 1626 873 277 120 32 chrX 136469869 136470906 -30179390 + L1MEc LINE L1 551 1733 -4682 9 1626 257 259 18 114 chrX 136470980 136471146 -30179150 + L1MB4 LINE L1 10 159 -6448 9 1626 234 234 0 0 chrX 136471541 136471588 -30178708 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 1626 1147 335 32 20 chrX 136471588 136472340 -30177956 - L1_Mur3 LINE L1 -124 5756 4996 9 1626 327 298 140 57 chrX 136472432 136472505 -30177791 - L1MEf LINE L1 -4217 2198 2121 9 1626 1304 161 9 39 chrX 136472505 136472737 -30177559 - URR1B DNA MER1_type 0 225 1 9 1626 383 293 65 51 chrX 136472745 136472961 -30177335 + MER20 DNA MER1_type 1 219 0 9 1626 333 274 179 43 chrX 136472961 136473273 -30177023 - L1MEf LINE L1 -4299 2116 1715 9 1626 387 301 129 8 chrX 136473558 136473682 -30176614 - RSINE1 SINE B4 -25 140 2 9 1626 265 305 121 16 chrX 136474005 136474195 -30176101 - L1M2 LINE L1 -4252 2597 2388 9 1626 329 315 64 153 chrX 136474486 136474846 -30175450 + MTEb LTR MaLR 52 379 0 9 1626 1094 308 41 73 chrX 136474847 136475187 -30175109 + Tigger7 DNA MER2_type 7 335 -2156 9 1626 353 368 17 8 chrX 136475388 136475506 -30174790 - B1F SINE Alu -11 138 20 9 1626 247 364 26 0 chrX 136475497 136475574 -30174722 - ID4_ SINE ID -1 82 4 9 1626 1213 243 75 12 chrX 136475583 136475929 -30174367 + ORR1D1 LTR MaLR 3 370 -4 9 1626 607 273 68 35 chrX 136476103 136476483 -30173813 - L1ME1 LINE L1 -22 6142 5723 9 1626 21 36 0 0 chrX 136476757 136476785 -30173511 + AT_rich Low_complexity Low_complexity 1 28 0 9 1626 303 49 0 0 chrX 136476984 136477025 -30173271 + (CATA)n Simple_repeat Simple_repeat 3 43 0 9 1626 291 213 54 54 chrX 136477351 136477480 -30172816 - L1MB3 LINE L1 -243 5940 5812 9 1626 231 330 77 13 chrX 136477604 136477837 -30172459 - L1M4 LINE L1 -2669 3471 3224 9 1626 555 198 0 67 chrX 136478010 136478129 -30172167 - B3A SINE B2 -84 111 1 9 1626 636 293 64 31 chrX 136478161 136478584 -30171712 - L1M4 LINE L1 -3281 2865 2429 9 1626 392 292 0 30 chrX 136478835 136478934 -30171362 - RSINE1 SINE B4 -66 99 4 9 1626 243 0 0 0 chrX 136479037 136479064 -30171232 + (TATAA)n Simple_repeat Simple_repeat 1 27 0 9 1626 333 233 172 45 chrX 136479075 136479251 -30171045 - MIRb SINE MIR -67 201 4 9 1626 1449 68 0 5 chrX 136479890 136480081 -30170215 + B2_Mm2 SINE B2 3 192 -3 9 1626 31126 147 16 6 chrX 136480631 136481498 -30168798 + L1Md_F2 LINE L1 446 1304 -5420 9 1626 8121 44 6 0 chrX 136481498 136482488 -30167808 + L1Md_F2 LINE L1 5587 6582 0 9 1626 31126 68 3 11 chrX 136482488 136486785 -30163511 + L1Md_F2 LINE L1 1305 5586 -297 9 1626 7983 58 1 2 chrX 136486786 136487778 -30162518 + L1Md_F2 LINE L1 5588 6578 -4 9 1626 638 300 106 15 chrX 136488290 136488554 -30161742 + B4A SINE B4 1 288 -4 9 1626 229 259 0 49 chrX 136488558 136488619 -30161677 + (CA)n Simple_repeat Simple_repeat 1 58 0 9 1626 601 270 18 25 chrX 136489894 136490107 -30160189 + B4A SINE B4 3 261 -31 9 1626 1107 119 0 0 chrX 136490123 136490334 -30159962 + (CA)n Simple_repeat Simple_repeat 1 211 0 9 1626 298 255 228 30 chrX 136490371 136490472 -30159824 + PB1 SINE Alu 7 127 0 9 1626 22 0 0 0 chrX 136490472 136490494 -30159802 + AT_rich Low_complexity Low_complexity 1 22 0 9 1626 358 224 116 28 chrX 136490942 136491049 -30159247 - PB1D10 SINE Alu -20 129 11 9 1626 436 291 105 55 chrX 136491071 136491271 -30159025 + HAL1 LINE L1 781 990 -1517 9 1626 1651 249 60 56 chrX 136491497 136492013 -30158283 + RMER5 LTR ERV1 1 518 -16 9 1626 588 177 127 54 chrX 136492565 136492786 -30157510 + Lx7 LINE L1 7256 7492 -204 9 1626 519 60 0 0 chrX 136492815 136492882 -30157414 + (GA)n Simple_repeat Simple_repeat 2 68 0 9 1626 257 190 25 12 chrX 136492902 136492982 -30157314 + Lx7 LINE L1 7616 7696 0 9 1626 26 53 0 17 chrX 136493070 136493105 -30157191 + AT_rich Low_complexity Low_complexity 1 35 0 9 1626 1012 194 61 5 chrX 136493105 136493302 -30156994 - B3 SINE B2 -7 209 2 9 1626 26 53 0 17 chrX 136493302 136493324 -30156972 + AT_rich Low_complexity Low_complexity 1 22 0 9 1626 369 145 0 0 chrX 136493785 136493847 -30156449 + (TA)n Simple_repeat Simple_repeat 2 63 0 9 1626 24 0 0 0 chrX 136494145 136494169 -30156127 + AT_rich Low_complexity Low_complexity 1 24 0 9 1626 292 235 12 12 chrX 136494222 136494304 -30155992 + (TA)n Simple_repeat Simple_repeat 2 83 0 9 1626 1039 283 54 26 chrX 136494321 136494818 -30155478 - L1MC3 LINE L1 -78 7882 7372 9 1626 4633 132 70 77 chrX 136494818 136495726 -30154570 + RMER19B LTR ERVK 1 902 0 9 1626 3116 280 111 32 chrX 136495868 136498874 -30151422 - L1MC3 LINE L1 -793 7167 3916 9 1626 265 253 101 67 chrX 136498987 136499165 -30151131 - L1MC3 LINE L1 -2372 3949 3766 9 1626 671 239 177 31 chrX 136499274 136499659 -30150637 - L1MC3 LINE L1 -4821 1687 1247 9 1626 28 48 0 0 chrX 136499696 136499738 -30150558 + AT_rich Low_complexity Low_complexity 1 42 0 9 1626 341 113 18 2 chrX 136499938 136500000 -30150296 + B1_Mur4 SINE Alu 1 62 -87 9 1626 434 58 174 0 chrX 136500000 136500069 -30150227 + B1_Mur4 SINE Alu 64 144 -6 1 1626 540 140 0 0 chrX 136500069 136500162 -30150134 + (GA)n Simple_repeat Simple_repeat 1 93 0 2 1626 353 138 11 33 chrX 136500141 136500208 -30150088 + GA-rich Low_complexity Low_complexity 2 65 0 3 1626 1181 68 17 6 chrX 136500208 136500386 -30149910 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 4 1626 353 138 11 33 chrX 136500386 136500408 -30149888 + polypurine Low_complexity Low_complexity 66 88 0 5 1626 729 294 6 0 chrX 136500522 136500685 -30149611 + MER5A DNA MER1_type 21 184 -5 6 1626 270 305 82 52 chrX 136500989 136501124 -30149172 + B1F SINE Alu 1 139 -10 7 1626 287 316 26 13 chrX 136501145 136501222 -30149074 + ID4_ SINE ID 5 82 -1 8 1626 327 237 123 0 chrX 136501222 136501336 -30148960 + L1M5 LINE L1 5682 5809 -353 9 1626 21 0 0 0 chrX 136501352 136501373 -30148923 + AT_rich Low_complexity Low_complexity 1 21 0 1 1626 437 192 133 23 chrX 136501502 136501630 -30148666 + Lx4B LINE L1 6917 7058 0 1 1626 474 235 52 9 chrX 136501644 136501760 -30148536 - Tigger5 DNA MER2_type -19 2387 2267 1 1626 589 288 56 25 chrX 136501737 136501933 -30148363 - Tigger5 DNA MER2_type -2168 238 37 1 1626 1895 34 0 8 chrX 136501942 136502180 -30148116 + L1Md_F3 LINE L1 6348 6583 -1 1 1626 198 143 0 0 chrX 136502229 136502264 -30148032 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1626 27 0 0 0 chrX 136503190 136503217 -30147079 + AT_rich Low_complexity Low_complexity 1 27 0 1 1626 253 319 0 0 chrX 136503270 136503339 -30146957 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 1626 367 283 130 12 chrX 136504153 136504314 -30145982 - L1MC4a LINE L1 -743 7218 7039 1 1626 210 71 0 0 chrX 136504487 136504515 -30145781 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1626 868 43 0 9 chrX 136504515 136504631 -30145665 - B1_Mus1 SINE Alu 0 148 34 1 1626 398 250 188 0 chrX 136504635 136504763 -30145533 - L1MC4a LINE L1 -1186 6856 6705 1 1626 351 284 0 12 chrX 136504889 136504971 -30145325 - ID2 SINE ID -2 81 1 2 1626 203 176 0 50 chrX 136505059 136505119 -30145177 + A-rich Low_complexity Low_complexity 4 60 0 2 1626 233 216 62 86 chrX 136505309 136505390 -30144906 - ID SINE ID -145 79 1 2 1626 579 321 45 62 chrX 136505641 136505882 -30144414 - L1MC4a LINE L1 -1976 5906 5680 1 1626 234 0 0 0 chrX 136505882 136505908 -30144388 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1626 579 321 45 62 chrX 136505908 136506068 -30144228 - L1MC4a LINE L1 -2203 5679 5512 1 1626 456 51 0 0 chrX 136506110 136506169 -30144127 + (GA)n Simple_repeat Simple_repeat 1 59 0 2 1626 32 43 0 0 chrX 136506215 136506261 -30144035 + AT_rich Low_complexity Low_complexity 1 46 0 2 1626 663 200 22 15 chrX 136506364 136506501 -30143795 + RSINE1 SINE B4 7 144 -21 2 1626 386 308 104 19 chrX 136506516 136506728 -30143568 + L1M5 LINE L1 5174 5403 -743 2 1626 217 289 0 0 chrX 136506871 136506923 -30143373 - L2a LINE L2 -32 3394 3343 2 1626 466 224 40 10 chrX 136506956 136507055 -30143241 + B1_Mur1 SINE Alu 47 148 -1 2 1626 264 314 12 0 chrX 136507375 136507461 -30142835 + L1M4 LINE L1 3476 3562 -2584 3 1626 408 293 0 3 chrX 136507474 136507593 -30142703 + MLT1D LTR MaLR 348 502 -3 3 1626 218 283 0 0 chrX 136507666 136507712 -30142584 + B3 SINE B2 28 73 -143 3 1626 555 288 70 60 chrX 136507741 136508125 -30142171 + L1M4 LINE L1 4068 4455 -1691 3 1626 239 83 48 48 chrX 136508125 136508188 -30142108 + (TATAA)n Simple_repeat Simple_repeat 2 64 0 3 1626 273 301 198 20 chrX 136508189 136508487 -30141809 + L1M4 LINE L1 4463 4813 -1333 3 1626 505 258 127 30 chrX 136508603 136508871 -30141425 + L1M4 LINE L1 5039 5332 -814 3 1626 7949 94 5 9 chrX 136509079 136510697 -30139599 + L1_Mus2 LINE L1 4975 6566 0 3 1626 442 318 15 31 chrX 136510700 136510830 -30139466 - Lx8 LINE L1 -237 7236 7109 3 1626 4429 107 35 7 chrX 136510832 136511510 -30138786 + Lx3A LINE L1 6285 6981 0 3 1626 244 291 34 0 chrX 136511896 136512013 -30138283 + L1ME3B LINE L1 5319 5439 -734 3 1626 673 245 28 0 chrX 136512256 136512399 -30137897 + B3 SINE B2 60 206 -10 3 1626 794 288 93 22 chrX 136512618 136513194 -30137102 + L1ME3B LINE L1 5511 6130 -110 3 1626 1150 36 0 0 chrX 136513217 136513357 -30136939 + B1_Mus1 SINE Alu 1 140 -8 3 1626 617 313 111 24 chrX 136513488 136513822 -30136474 + MLT1C LTR MaLR 53 415 -52 4 1626 1816 314 59 49 chrX 136513854 136514706 -30135590 + MLT1C-int LTR MaLR 61 920 -451 4 1626 732 300 33 88 chrX 136514762 136514943 -30135353 + MLT1C-int LTR MaLR 1081 1256 -115 4 1626 719 191 21 35 chrX 136514943 136515084 -30135212 - B1_Mur4 SINE Alu -8 142 4 4 1626 732 300 33 88 chrX 136515084 136515209 -30135087 + MLT1C-int LTR MaLR 1257 1370 -1 4 1626 366 363 66 19 chrX 136515311 136515567 -30134729 + MLT1C LTR MaLR 115 382 -85 4 1626 234 250 48 36 chrX 136515555 136515638 -30134658 + MLT1A LTR MaLR 287 370 -4 4 1626 542 289 38 84 chrX 136515680 136515967 -30134329 + L1ME2z LINE L1 5816 6089 -355 4 1626 342 311 56 19 chrX 136515991 136516099 -30134197 + MER63A DNA AcHobo 43 154 -56 4 1626 479 266 123 11 chrX 136516177 136516454 -30133842 + L1ME2z LINE L1 6113 6420 -24 4 1626 396 0 0 0 chrX 136517165 136517209 -30133087 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 4 1626 253 273 77 93 chrX 136517296 136517372 -30132924 + MT2B LTR ERVL 82 154 -447 4 1626 520 305 8 0 chrX 136517372 136517500 -30132796 + B1F1 SINE Alu 1 129 -20 4 1626 333 0 0 0 chrX 136517502 136517539 -30132757 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 4 1626 434 348 21 27 chrX 136517859 136518045 -30132251 + MIRb SINE MIR 76 260 -8 4 1626 260 280 0 39 chrX 136518047 136518125 -30132171 + L1MD2 LINE L1 23 97 -6450 5 1626 264 302 33 16 chrX 136518125 136518246 -30132050 + L1MD2 LINE L1 62 184 -6363 5 1626 198 167 0 0 chrX 136518476 136518512 -30131784 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 1626 252 175 31 61 chrX 136518529 136518611 -30131685 + L1ME1 LINE L1 4961 5043 -1103 5 1626 803 327 114 74 chrX 136518738 136519520 -30130776 + L1M4 LINE L1 5 817 -5725 5 1626 678 262 137 22 chrX 136519551 136519828 -30130468 + L1MB7 LINE L1 5859 6169 -15 5 1626 543 315 87 84 chrX 136519930 136520415 -30129881 + L1MB3 LINE L1 379 864 -6040 5 1626 990 259 22 61 chrX 136520459 136520771 -30129525 + Lx8 LINE L1 7114 7413 -60 5 1626 448 280 155 50 chrX 136521167 136521908 -30128388 + L1MB3 LINE L1 1335 2064 -4840 5 1626 318 233 0 0 chrX 136521931 136522017 -30128279 + (TG)n Simple_repeat Simple_repeat 1 86 0 5 1626 1031 259 90 4 chrX 136522062 136522239 -30128057 - B4 SINE B4 -13 279 85 5 1626 216 0 0 0 chrX 136522239 136522263 -30128033 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1626 1031 259 90 4 chrX 136522263 136522341 -30127955 - B4 SINE B4 -208 84 3 5 1626 233 280 214 0 chrX 136522639 136522807 -30127489 + L1MB3 LINE L1 2254 2457 -4551 5 1626 389 241 0 0 chrX 136523232 136523315 -30126981 + Lx9 LINE L1 7196 7278 -366 6 1626 345 47 0 0 chrX 136523363 136523406 -30126890 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 6 1626 951 278 80 11 chrX 136523407 136523753 -30126543 + L1MB3 LINE L1 5621 5985 -1015 5 1626 983 142 14 0 chrX 136523753 136523901 -30126395 + B1_Mur4 SINE Alu 1 150 0 6 1626 2659 243 142 14 chrX 136523901 136524832 -30125464 + L1MB3 LINE L1 5986 7041 -2 5 1626 1966 254 100 13 chrX 136524836 136525713 -30124583 + L1ME1 LINE L1 5183 6151 -28 5 1626 538 307 73 5 chrX 136526205 136526411 -30123885 - MIR SINE MIR -34 228 9 6 1626 206 362 0 0 chrX 136528814 136528872 -30121424 - MIRm SINE MIR -6 270 213 6 1626 208 143 0 87 chrX 136528885 136528900 -30121396 + A-rich Low_complexity Low_complexity 1 12 0 6 1626 1033 84 28 0 chrX 136528900 136529043 -30121253 + B1_Mus1 SINE Alu 2 148 0 6 1626 208 143 0 87 chrX 136529043 136529073 -30121223 + A-rich Low_complexity Low_complexity 13 42 0 6 1626 743 226 36 6 chrX 136529078 136529243 -30121053 + B3 SINE B2 1 170 -46 6 1626 2403 172 2 21 chrX 136529954 136530381 -30119915 + MTD LTR MaLR 1 419 0 6 1626 234 138 0 65 chrX 136531837 136531875 -30118421 + A-rich Low_complexity Low_complexity 1 35 0 7 1626 1105 90 0 0 chrX 136531875 136532019 -30118277 + B1_Mus1 SINE Alu 1 144 -4 7 1626 219 195 47 35 chrX 136532019 136532065 -30118231 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 7 1626 368 230 274 0 chrX 136533565 136533678 -30116618 + B3 SINE B2 51 194 -22 7 1626 315 277 136 48 chrX 136533744 136533869 -30116427 + ID_B1 SINE B4 1 136 -88 7 1626 270 184 0 0 chrX 136534070 136534146 -30116150 + A-rich Low_complexity Low_complexity 1 76 0 7 1626 425 281 155 4 chrX 136534183 136534447 -30115849 + L1MC3 LINE L1 7466 7769 -16 7 1626 2157 81 0 32 chrX 136534452 136534760 -30115536 - Lx3A LINE L1 -1029 5952 5655 7 1626 6622 85 48 32 chrX 136534760 136535760 -30114536 + Lx3A LINE L1 5958 6973 -8 7 1626 22 0 0 0 chrX 136535763 136535785 -30114511 + AT_rich Low_complexity Low_complexity 1 22 0 7 1626 4263 52 0 0 chrX 136535785 136536306 -30113990 + L1Md_F2 LINE L1 6050 6570 -12 7 1626 326 283 35 17 chrX 136536360 136536475 -30113821 + L1M5 LINE L1 5466 5582 -542 8 1626 520 194 21 0 chrX 136536890 136536983 -30113313 - PB1D10 SINE Alu -10 107 13 8 1626 183 312 16 0 chrX 136537219 136537283 -30113013 + MIRc SINE MIR 88 152 -116 8 1626 762 170 47 7 chrX 136537285 136537433 -30112863 + URR1A DNA MER1_type 4 157 -69 8 1626 1675 207 94 34 chrX 136537433 136537899 -30112397 - RMER20A LTR ERVK 0 516 23 8 1626 447 158 0 0 chrX 136537900 136537976 -30112320 + URR1A DNA MER1_type 150 225 -1 8 1626 1038 67 37 0 chrX 136538882 136539016 -30111280 + B1_Mus2 SINE Alu 1 139 -8 8 1626 282 29 0 0 chrX 136539016 136539051 -30111245 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 1626 2235 71 32 0 chrX 136539101 136539409 -30110887 + ORR1A2 LTR MaLR 1 318 -9 8 1626 1279 179 89 7 chrX 136539571 136539853 -30110443 - Lx3C LINE L1 -4 6972 6668 8 1626 1093 77 0 0 chrX 136540108 136540251 -30110045 + B1_Mus2 SINE Alu 5 147 0 8 1626 353 296 16 50 chrX 136540999 136541120 -30109176 - PB1D10 SINE Alu 0 117 1 9 1626 21 0 0 0 chrX 136541255 136541276 -30109020 + AT_rich Low_complexity Low_complexity 1 21 0 9 1626 344 253 51 0 chrX 136541525 136541604 -30108692 + PB1D10 SINE Alu 34 116 -1 9 1626 282 343 35 35 chrX 136543797 136543942 -30106354 + L1MB7 LINE L1 5947 6091 -93 9 1626 285 312 0 0 chrX 136544017 136544081 -30106215 - B1F SINE Alu -82 67 4 9 1626 313 264 44 52 chrX 136544886 136545022 -30105274 + HAL1 LINE L1 589 723 -1784 9 1626 360 336 120 7 chrX 136545315 136545863 -30104433 + HAL1 LINE L1 1086 1695 -812 9 1626 270 208 40 40 chrX 136546011 136546086 -30104210 + tRNA-Ala-GCY_ tRNA tRNA 1 75 0 9 1626 330 296 174 25 chrX 136546178 136546379 -30103917 + HAL1 LINE L1 1975 2205 -302 9 1626 1147 276 102 65 chrX 136546573 136547607 -30102689 + L1MD LINE L1 3014 4086 -2060 9 1626 486 239 0 4 chrX 136547736 136547849 -30102447 + B1F SINE Alu 2 112 -8 9 1626 296 268 68 27 chrX 136547899 136547972 -30102324 + RSINE1 SINE B4 90 165 0 9 1626 404 239 41 48 chrX 136548229 136548374 -30101922 + L1MD1 LINE L1 6078 6221 -21 1 1626 275 254 40 53 chrX 136548430 136548505 -30101791 - PB1D7 SINE Alu -10 110 37 1 1626 264 247 47 58 chrX 136548857 136548868 -30101428 - B3A SINE B2 -113 85 1 1 1626 301 216 13 13 chrX 136548868 136548943 -30101353 - B4A SINE B4 -217 75 1 1 1626 253 232 14 0 chrX 136549164 136549233 -30101063 + L1MA5 LINE L1 6230 6299 -1 1 1626 380 333 108 8 chrX 136549245 136549375 -30100921 + RSINE1 SINE B4 6 148 -17 1 1626 428 270 18 0 chrX 136549433 136549544 -30100752 + PB1D7 SINE Alu 1 113 -7 1 1626 573 88 0 0 chrX 136549760 136549840 -30100456 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 1626 422 350 0 25 chrX 136550683 136550803 -30099493 - ID_B1 SINE B4 -29 195 79 1 1626 583 228 29 29 chrX 136550818 136550958 -30099338 - B1_Mur1 SINE Alu -9 140 1 1 1626 180 0 0 0 chrX 136551725 136551745 -30098551 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 1626 927 271 113 69 chrX 136552099 136552551 -30097745 - L1MC1 LINE L1 0 6333 5862 1 1626 779 128 75 0 chrX 136553092 136553225 -30097071 - URR1B DNA MER1_type 0 225 83 1 1626 328 294 10 61 chrX 136553524 136553649 -30096647 + MIRm SINE MIR 26 147 -121 1 1626 294 289 61 40 chrX 136554081 136554229 -30096067 - MIRb SINE MIR -10 258 108 1 1626 1136 61 0 7 chrX 136554366 136554514 -30095782 - B1_Mm SINE Alu 0 147 1 1 1626 392 320 123 30 chrX 136554843 136555044 -30095252 - L1MC4 LINE L1 -878 7164 6942 1 1626 1954 184 148 24 chrX 136555044 136555511 -30094785 - RLTR12B LTR ERVK 0 528 4 1 1626 392 320 123 30 chrX 136555511 136555738 -30094558 - L1MC4 LINE L1 -1101 6941 6696 1 1626 327 279 70 38 chrX 136555996 136556149 -30094147 + B4A SINE B4 2 286 -6 1 1626 325 218 231 29 chrX 136556983 136557087 -30093209 - B1F SINE Alu -7 142 18 1 1626 21 0 0 0 chrX 136557094 136557115 -30093181 + AT_rich Low_complexity Low_complexity 1 21 0 1 1626 192 163 0 0 chrX 136557334 136557377 -30092919 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 1626 277 291 25 0 chrX 136558775 136558854 -30091442 - MIR3 SINE MIR -26 182 102 1 1626 234 0 0 0 chrX 136560414 136560440 -30089856 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 1 1626 292 307 120 26 chrX 136560721 136560838 -30089458 + ID_B1 SINE B4 78 205 -19 1 1626 231 159 0 0 chrX 136560863 136560869 -30089427 + (TG)n Simple_repeat Simple_repeat 2 7 0 1 1626 497 226 0 189 chrX 136560869 136561049 -30089247 + B1_Mur1 SINE Alu 2 147 -2 1 1626 231 159 0 0 chrX 136561049 136561086 -30089210 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1626 424 308 0 8 chrX 136561283 136561404 -30088892 + PB1 SINE Alu 1 120 -7 1 1626 312 281 132 22 chrX 136562944 136563126 -30087170 + L1MD1 LINE L1 63 264 -7070 1 1626 921 287 87 39 chrX 136564083 136564812 -30085484 + L1MD1 LINE L1 1452 2192 -4910 1 1626 252 0 0 0 chrX 136564812 136564840 -30085456 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1626 594 309 113 54 chrX 136564840 136565926 -30084370 + L1MD1 LINE L1 2193 3374 -3632 1 1626 760 271 193 42 chrX 136566091 136567091 -30083205 + L1MD1 LINE L1 3349 4499 -2507 1 1626 566 314 163 15 chrX 136567299 136567642 -30082654 + Lx8 LINE L1 7055 7448 -25 1 1626 918 280 112 49 chrX 136567664 136568086 -30082210 + L1MD1 LINE L1 6247 6696 -406 1 1626 1200 48 0 0 chrX 136568086 136568233 -30082063 - B1_Mm SINE Alu 0 147 1 1 1626 918 280 112 49 chrX 136568233 136568459 -30081837 + L1MD1 LINE L1 6697 6936 -166 1 1626 44 20 0 0 chrX 136568480 136568531 -30081765 + AT_rich Low_complexity Low_complexity 1 51 0 1 1626 665 281 9 67 chrX 136568538 136568748 -30081548 - B3A SINE B2 0 198 1 1 1626 374 226 65 19 chrX 136568750 136568858 -30081438 + L1MD1 LINE L1 6924 7036 -66 1 1626 383 369 55 9 chrX 136568883 136569102 -30081194 + MIR SINE MIR 32 260 -2 1 1626 219 276 0 0 chrX 136569395 136569453 -30080843 + (TGG)n Simple_repeat Simple_repeat 3 60 0 1 1626 497 250 1 37 chrX 136569681 136569844 -30080452 + L1M3 LINE L1 3429 3591 -2555 1 1626 275 0 0 28 chrX 136570716 136570752 -30079544 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1 1626 571 307 28 33 chrX 136571585 136571600 -30078696 + MTD LTR MaLR 6 18 -401 1 1626 260 53 0 26 chrX 136571600 136571639 -30078657 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1 1626 571 268 169 84 chrX 136571639 136571884 -30078412 + MTD LTR MaLR 19 288 -119 1 1626 363 44 0 0 chrX 136572393 136572438 -30077858 + (TTC)n Simple_repeat Simple_repeat 2 46 0 1 1626 1027 71 0 14 chrX 136572442 136572584 -30077712 - B1_Mus1 SINE Alu -7 141 2 1 1626 1544 204 24 18 chrX 136572813 136573143 -30077153 + ORR1D1 LTR MaLR 1 332 -42 1 1626 1101 50 0 0 chrX 136573165 136573305 -30076991 + (TG)n Simple_repeat Simple_repeat 1 140 0 1 1626 325 172 0 30 chrX 136573315 136573381 -30076915 + ORR1D1 LTR MaLR 311 374 0 1 1626 772 82 14 63 chrX 136573871 136574014 -30076282 - L1_Mus3 LINE L1 -5 6633 6498 1 1626 1135 322 123 41 chrX 136574149 136574883 -30075413 + L1M4b LINE L1 71 864 -6470 1 1626 1340 217 24 32 chrX 136574911 136575287 -30075009 + L1MB7 LINE L1 5812 6184 0 1 1626 444 207 0 18 chrX 136575282 136575395 -30074901 + L1M4b LINE L1 4743 4853 -2153 1 1626 180 0 0 0 chrX 136575725 136575745 -30074551 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1626 833 146 51 7 chrX 136575991 136576129 -30074167 - B1_Mus1 SINE Alu 0 148 5 1 1626 289 386 19 0 chrX 136576215 136576373 -30073923 + RSINE1 SINE B4 1 161 -4 1 1626 351 327 60 64 chrX 136576376 136576641 -30073655 + L1MC4a LINE L1 5674 5937 -1945 1 1626 476 301 34 27 chrX 136576645 136576792 -30073504 + RSINE1 SINE B4 2 149 -16 1 1626 296 119 17 0 chrX 136576801 136576860 -30073436 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 1627 408 331 102 29 chrX 136577592 136577934 -30072362 - L1M5 LINE L1 -1522 4624 4258 1 1627 228 283 17 0 chrX 136578142 136578202 -30072094 - MER20 DNA MER1_type -1 218 158 1 1627 842 226 64 25 chrX 136578232 136578328 -30071968 + Lx7 LINE L1 5617 5718 -1978 1 1627 2102 135 76 6 chrX 136578328 136578671 -30071625 - ORR1B2 LTR MaLR 0 367 1 1 1627 842 226 64 25 chrX 136578671 136578810 -30071486 + Lx7 LINE L1 5719 5861 -1835 1 1627 447 19 0 0 chrX 136578810 136578862 -30071434 + (GA)n Simple_repeat Simple_repeat 2 53 0 1 1627 300 286 0 28 chrX 136578862 136578960 -30071336 + Lx8 LINE L1 7365 7459 -14 1 1627 26 0 0 0 chrX 136578960 136578986 -30071310 + AT_rich Low_complexity Low_complexity 1 26 0 1 1627 995 323 84 57 chrX 136579004 136579755 -30070541 + Lx8 LINE L1 6694 7464 -9 1 1627 675 170 13 26 chrX 136579766 136579917 -30070379 + Lx5 LINE L1 6902 7050 0 1 1627 752 236 8 6 chrX 136580086 136580248 -30070048 + ID_B1 SINE B4 70 233 -59 1 1627 308 258 53 42 chrX 136580304 136580330 -30069966 + L1MD1 LINE L1 2450 2477 -4156 1 1627 262 299 124 0 chrX 136580330 136580427 -30069869 + PB1D10 SINE Alu 1 109 -8 1 1627 1055 272 58 30 chrX 136580427 136580979 -30069317 + L1MD1 LINE L1 2478 3049 -3488 1 1627 215 61 30 0 chrX 136580983 136581016 -30069280 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 1 1627 225 0 0 0 chrX 136581066 136581091 -30069205 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1627 522 99 0 0 chrX 136581091 136581182 -30069114 + (GA)n Simple_repeat Simple_repeat 1 91 0 1 1627 812 244 121 20 chrX 136581450 136581840 -30068456 + L1MD1 LINE L1 3190 3618 -2919 1 1627 285 281 162 70 chrX 136581859 136582100 -30068196 + B4 SINE B4 17 279 -13 1 1627 21 0 0 0 chrX 136582223 136582244 -30068052 + AT_rich Low_complexity Low_complexity 1 21 0 1 1627 1458 201 81 6 chrX 136582385 136582730 -30067566 + L1MD1 LINE L1 5748 6118 -632 1 1627 350 295 63 101 chrX 136582999 136583343 -30066953 + L1MD1 LINE L1 6144 6456 -294 1 1627 388 254 17 60 chrX 136583447 136583564 -30066732 + PB1D10 SINE Alu 1 112 -5 1 1627 459 0 0 0 chrX 136583627 136583678 -30066618 + (TTA)n Simple_repeat Simple_repeat 1 51 0 1 1627 1187 55 0 7 chrX 136583679 136583827 -30066469 - B1_Mus1 SINE Alu -1 147 1 1 1627 197 120 0 39 chrX 136584926 136584978 -30065318 + (CAGAGA)n Simple_repeat Simple_repeat 3 52 0 1 1627 219 222 36 18 chrX 136585300 136585355 -30064941 + ID4 SINE ID 26 81 -2 1 1627 242 191 0 0 chrX 136585663 136585710 -30064586 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1627 482 263 0 0 chrX 136586163 136586277 -30064019 + PB1D10 SINE Alu 4 117 0 1 1627 278 229 35 24 chrX 136586277 136586362 -30063934 + GA-rich Low_complexity Low_complexity 2 87 0 1 1627 213 293 24 12 chrX 136586478 136586561 -30063735 + CT-rich Low_complexity Low_complexity 1 84 0 1 1627 474 257 9 0 chrX 136586570 136586675 -30063621 - PB1D10 SINE Alu -11 106 1 1 1627 455 310 111 24 chrX 136587340 136587637 -30062659 - Kanga1b DNA Tc2 -360 419 97 1 1627 528 250 0 9 chrX 136588123 136588236 -30062060 - PB1D7 SINE Alu -8 112 1 1 1627 393 293 71 55 chrX 136588618 136588871 -30061425 - L1MEe LINE L1 -3620 2526 2270 1 1627 492 179 143 0 chrX 136588917 136589029 -30061267 - Lx9 LINE L1 -701 6943 6816 1 1627 30 0 0 0 chrX 136589068 136589098 -30061198 + AT_rich Low_complexity Low_complexity 1 30 0 1 1627 398 283 95 45 chrX 136589107 136589329 -30060967 - L1MEe LINE L1 -3969 2197 1965 1 1627 207 151 18 54 chrX 136591355 136591411 -30058885 + A-rich Low_complexity Low_complexity 3 56 0 1 1627 447 19 0 0 chrX 136591740 136591792 -30058504 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 1627 301 291 0 19 chrX 136592130 136592235 -30058061 + GA-rich Low_complexity Low_complexity 4 106 0 1 1627 23 33 0 0 chrX 136592251 136592281 -30058015 + AT_rich Low_complexity Low_complexity 1 30 0 1 1627 1035 184 15 10 chrX 136592343 136592541 -30057755 - B3 SINE B2 -13 203 5 1 1627 394 285 81 8 chrX 136592566 136592690 -30057606 - ID_B1 SINE B4 -15 209 77 1 1627 744 247 91 45 chrX 136592690 136592889 -30057407 - B3 SINE B2 -6 210 3 1 1627 597 262 63 21 chrX 136593071 136593250 -30057046 + B3A SINE B2 1 169 -26 1 1627 25 0 0 0 chrX 136593491 136593516 -30056780 + AT_rich Low_complexity Low_complexity 1 25 0 1 1627 436 274 35 26 chrX 136594821 136594937 -30055359 - PB1D10 SINE Alu 0 117 1 1 1627 259 143 20 21 chrX 136598474 136598536 -30051760 - B1F SINE Alu -66 83 19 1 1627 387 258 0 20 chrX 136598626 136598725 -30051571 + PB1 SINE Alu 31 127 0 1 1627 1162 62 0 7 chrX 136598840 136598987 -30051309 - B1_Mm SINE Alu -1 146 1 1 1627 189 0 0 0 chrX 136599018 136599039 -30051257 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1627 363 233 42 62 chrX 136599118 136599214 -30051082 - PB1 SINE Alu -2 125 32 2 1627 470 248 57 0 chrX 136599603 136599708 -30050588 - B3A SINE B2 -87 111 1 2 1627 222 328 0 0 chrX 136599957 136600021 -30050275 - ID4 SINE ID -16 67 4 2 1627 312 105 40 0 chrX 136600154 136600230 -30050066 + (GA)n Simple_repeat Simple_repeat 2 80 0 2 1627 21 0 0 0 chrX 136601436 136601457 -30048839 + AT_rich Low_complexity Low_complexity 1 21 0 2 1627 21 0 0 0 chrX 136601784 136601805 -30048491 + AT_rich Low_complexity Low_complexity 1 21 0 2 1627 661 301 175 26 chrX 136601812 136602233 -30048063 - MARNA DNA Mariner -33 553 70 2 1627 626 348 19 12 chrX 136603340 136603599 -30046697 - MIR SINE MIR 0 262 2 2 1627 1634 73 17 4 chrX 136604358 136604593 -30045703 + L1Md_F3 LINE L1 6347 6584 0 2 1627 326 308 0 3 chrX 136604681 136604775 -30045521 - ID4_ SINE ID -50 102 10 2 1627 4323 44 22 4 chrX 136604846 136605393 -30044903 - L1Md_F3 LINE L1 -14 6570 6014 2 1627 235 294 28 11 chrX 136610015 136610103 -30040193 - L2a LINE L2 -9 3417 3276 2 1627 1917 193 39 7 chrX 136612627 136613034 -30037262 - MTC LTR MaLR 0 421 2 2 1627 1111 177 117 29 chrX 136613355 136613663 -30036633 - Lx7 LINE L1 -4 7692 7358 2 1627 326 309 9 0 chrX 136613710 136613820 -30036476 - Lx7 LINE L1 -333 7363 7253 2 1627 7114 43 0 0 chrX 136614741 136615600 -30034696 + L1Md_T LINE L1 5723 6581 -1 2 1627 486 176 53 24 chrX 136615612 136615631 -30034665 + RMER17C LTR ERVK 104 122 -288 2 1627 477 0 0 0 chrX 136615631 136615684 -30034612 + (TTCTC)n Simple_repeat Simple_repeat 3 55 0 2 1627 486 176 53 24 chrX 136615684 136615833 -30034463 + RMER17C LTR ERVK 123 277 -133 2 1627 307 247 34 0 chrX 136615925 136616014 -30034282 + GA-rich Low_complexity Low_complexity 2 93 0 2 1627 225 0 0 0 chrX 136618309 136618334 -30031962 + (TC)n Simple_repeat Simple_repeat 2 26 0 2 1627 369 0 0 0 chrX 136618334 136618374 -30031922 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1627 1064 251 15 51 chrX 136618380 136618653 -30031643 - B4 SINE B4 -29 263 1 2 1627 1122 236 122 10 chrX 136620601 136620896 -30029400 + MTD LTR MaLR 1 328 -91 2 1627 630 175 9 0 chrX 136620892 136621006 -30029290 - ORR1D1 LTR MaLR -255 119 5 2 1627 832 213 0 20 chrX 136621063 136621216 -30029080 - B1_Mur4 SINE Alu 0 150 1 2 1627 230 216 40 3 chrX 136621330 136621389 -30028907 - L2c LINE L2 0 3387 3316 2 1627 336 102 0 0 chrX 136621754 136621803 -30028493 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1627 209 119 27 82 chrX 136621821 136621894 -30028402 + (TA)n Simple_repeat Simple_repeat 2 70 0 2 1627 755 373 19 65 chrX 136621895 136622202 -30028094 - LTR75 LTR ERVL -269 293 1 2 1627 427 339 63 0 chrX 136622274 136622448 -30027848 - MIR SINE MIR -21 241 57 2 1627 1136 78 0 0 chrX 136622624 136622765 -30027531 + B1_Mm SINE Alu 1 141 -6 2 1627 564 89 0 0 chrX 136622770 136622849 -30027447 + (GGAA)n Simple_repeat Simple_repeat 3 81 0 2 1627 508 140 35 9 chrX 136622908 136623023 -30027273 - Lx9 LINE L1 0 7644 7527 2 1627 694 305 92 47 chrX 136623171 136623522 -30026774 + MLT1A LTR MaLR 1 406 -2 2 1627 774 149 49 21 chrX 136623771 136623915 -30026381 + B1_Mur4 SINE Alu 2 149 -1 2 1627 380 55 18 0 chrX 136624484 136624539 -30025757 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 1627 438 291 134 79 chrX 136625386 136625640 -30024656 - LTR90A LTR LTR -708 268 1 2 1627 785 307 13 3 chrX 136626126 136626430 -30023866 + L1MA6 LINE L1 5961 6267 -33 2 1627 234 0 0 0 chrX 136626449 136626475 -30023821 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1627 300 262 204 43 chrX 136626534 136626769 -30023527 - B4A SINE B4 -18 274 2 2 1627 1601 271 77 42 chrX 136626876 136627458 -30022838 - Lx7 LINE L1 -332 7364 6754 2 1627 1385 88 107 10 chrX 136627458 136627664 -30022632 + URR1A DNA MER1_type 1 226 0 2 1627 1601 271 77 42 chrX 136627664 136627721 -30022575 - Lx7 LINE L1 -943 6753 6703 2 1627 24 0 0 0 chrX 136627893 136627917 -30022379 + AT_rich Low_complexity Low_complexity 1 24 0 2 1627 229 277 48 36 chrX 136627969 136628134 -30022162 + Lx9 LINE L1 7477 7643 -1 2 1627 285 29 0 0 chrX 136628436 136628470 -30021826 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 2 1627 485 296 0 36 chrX 136628765 136628877 -30021419 + PB1D10 SINE Alu 3 110 -7 2 1627 320 338 71 112 chrX 136629121 136629364 -30020932 + L2 LINE L2 2424 2646 -773 2 1627 2659 56 0 20 chrX 136629364 136629709 -30020587 - L1_Mus2 LINE L1 -1 6565 6228 2 1627 320 338 71 112 chrX 136629709 136629875 -30020421 + L2 LINE L2 2647 2815 -604 2 1627 441 305 25 0 chrX 136629877 136629995 -30020301 + B1F SINE Alu 27 147 -2 2 1627 220 342 138 72 chrX 136630012 136630207 -30020089 + L2 LINE L2 2814 3021 -398 2 1627 227 237 0 0 chrX 136630385 136630461 -30019835 - Lx9 LINE L1 -3 7641 7566 2 1627 1110 246 128 3 chrX 136630470 136630837 -30019459 + Lx9 LINE L1 7120 7532 -112 2 1627 266 348 74 10 chrX 136630865 136631107 -30019189 - L2a LINE L2 -2569 850 642 2 1627 667 258 119 23 chrX 136631129 136631474 -30018822 - L1MA9 LINE L1 -66 6246 5869 2 1627 365 355 139 12 chrX 136631559 136631898 -30018398 - L2a LINE L2 -2891 528 147 2 1627 362 261 36 0 chrX 136631964 136632075 -30018221 - PB1D10 SINE Alu 0 117 3 2 1627 41 21 0 0 chrX 136632690 136632738 -30017558 + AT_rich Low_complexity Low_complexity 1 48 0 2 1627 587 256 157 29 chrX 136632741 136633091 -30017205 - Lx9 LINE L1 -23 7621 7227 2 1627 1579 209 105 18 chrX 136634423 136634803 -30015493 + MTD LTR MaLR 7 419 0 2 1627 1037 299 16 25 chrX 136634854 136635131 -30015165 - L1MB5 LINE L1 -62 6112 5835 2 1627 732 258 82 0 chrX 136635131 136635325 -30014971 + B3 SINE B2 3 212 -4 2 1627 1037 299 16 25 chrX 136635325 136635486 -30014810 - L1MB5 LINE L1 -340 5834 5678 2 1627 279 320 0 0 chrX 136635534 136635612 -30014684 - ID_B1 SINE B4 -5 219 142 2 1627 271 273 15 15 chrX 136636404 136636471 -30013825 + ID4_ SINE ID 1 67 -16 2 1627 1888 115 82 3 chrX 136637137 136637443 -30012853 + Lx LINE L1 6317 6646 -8 2 1627 342 0 0 0 chrX 136637540 136637578 -30012718 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1627 1742 195 39 63 chrX 136638006 136638421 -30011875 - MTD LTR MaLR -14 405 1 2 1627 267 240 107 5 chrX 136639048 136639144 -30011152 + B4A SINE B4 1 102 -63 2 1627 675 0 0 0 chrX 136639237 136639312 -30010984 + (GAAA)n Simple_repeat Simple_repeat 4 78 0 2 1627 256 193 18 0 chrX 136639312 136639369 -30010927 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1627 191 103 26 0 chrX 136640010 136640049 -30010247 + (TTTTTG)n Simple_repeat Simple_repeat 1 40 0 2 1627 915 56 128 0 chrX 136640049 136640174 -30010122 - B1_Mus1 SINE Alu -6 142 2 2 1627 274 330 22 11 chrX 136640200 136640289 -30010007 - PB1D10 SINE Alu -11 106 17 2 1627 532 129 10 10 chrX 136641550 136641652 -30008644 + (GGGA)n Simple_repeat Simple_repeat 3 104 0 2 1627 496 248 8 0 chrX 136641677 136641794 -30008502 + PB1D9 SINE Alu 2 119 -1 2 1627 946 155 213 0 chrX 136642222 136642396 -30007900 - B3 SINE B2 -5 211 1 2 1627 1462 222 120 14 chrX 136642561 136642927 -30007369 - MTD LTR MaLR -14 405 1 2 1627 2323 132 93 0 chrX 136643412 136643820 -30006476 + L1_Mur3 LINE L1 5287 5732 -148 2 1627 3866 239 147 17 chrX 136643816 136644956 -30005340 + Lx6 LINE L1 6084 7351 -109 2 1627 237 33 0 0 chrX 136644956 136644986 -30005310 + (GGGGA)n Simple_repeat Simple_repeat 3 32 0 2 1627 3866 239 147 17 chrX 136644986 136645064 -30005232 + Lx6 LINE L1 7352 7459 -1 2 1627 234 0 0 0 chrX 136645546 136645572 -30004724 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 1627 881 155 42 24 chrX 136645588 136645753 -30004543 + ORR1D1 LTR MaLR 166 333 -41 2 1627 216 97 0 0 chrX 136646328 136646359 -30003937 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1627 21 36 0 0 chrX 136646505 136646533 -30003763 + AT_rich Low_complexity Low_complexity 1 28 0 2 1627 486 0 0 0 chrX 136646589 136646643 -30003653 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 1627 225 0 0 0 chrX 136646643 136646667 -30003629 + (TTCC)n Simple_repeat Simple_repeat 3 27 0 2 1627 377 298 41 0 chrX 136646892 136647063 -30003233 + L1MC4a LINE L1 7688 7865 -17 2 1627 450 0 0 0 chrX 136647217 136647267 -30003029 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 2 1627 1169 57 0 0 chrX 136647269 136647409 -30002887 - B1_Mus2 SINE Alu -7 140 1 2 1627 277 277 89 37 chrX 136647626 136647761 -30002535 + L1M4 LINE L1 22 163 -6379 2 1627 275 113 0 19 chrX 136647763 136647817 -30002479 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2 1627 395 153 30 30 chrX 136648020 136648121 -30002175 + L1M4 LINE L1 5102 5202 -944 2 1627 1143 96 0 0 chrX 136648126 136648272 -30002024 + B1_Mus1 SINE Alu 3 148 0 2 1627 457 211 18 8 chrX 136648274 136648411 -30001885 + Lx4A LINE L1 5138 5289 -857 2 1627 2126 169 22 0 chrX 136648408 136648816 -30001480 + Lx9 LINE L1 6995 7411 -233 2 1627 9023 128 22 6 chrX 136648874 136650344 -29999952 + Lx4A LINE L1 5587 7058 0 2 1627 584 77 8 49 chrX 136650533 136650656 -29999640 + (TA)n Simple_repeat Simple_repeat 1 118 0 2 1627 228 35 0 0 chrX 136650656 136650684 -29999612 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1627 836 232 63 8 chrX 136651472 136651711 -29998585 - Tigger7 DNA MER2_type 0 2491 2240 2 1627 434 265 0 25 chrX 136651711 136651831 -29998465 - Tigger7 DNA MER2_type -2318 173 57 2 1627 553 359 12 43 chrX 136652059 136652222 -29998074 + RSINE1 SINE B4 2 159 -6 2 1627 2230 227 85 37 chrX 136652529 136653224 -29997072 - L1_Mur3 LINE L1 -1235 4645 3918 2 1627 282 241 12 12 chrX 136653873 136653953 -29996343 + L1M4 LINE L1 1 80 -6462 2 1627 234 300 14 0 chrX 136653981 136654051 -29996245 + L1M4 LINE L1 168 238 -6304 2 1627 723 260 32 4 chrX 136654223 136654404 -29995892 + L1MA9 LINE L1 5229 5416 -896 2 1627 210 37 0 0 chrX 136654404 136654431 -29995865 + (G)n Simple_repeat Simple_repeat 1 27 0 2 1627 723 249 33 4 chrX 136654431 136654514 -29995782 + L1MA9 LINE L1 5417 5501 -811 2 1627 2261 246 21 17 chrX 136654515 136655281 -29995015 + Lx6 LINE L1 6455 7450 -10 2 1627 1439 196 20 62 chrX 136655289 136655643 -29994653 + L1MA9 LINE L1 5478 5816 -496 2 1627 498 271 36 6 chrX 136655665 136655832 -29994464 + L1MA9 LINE L1 5961 6132 -180 2 1627 513 0 0 0 chrX 136655850 136655907 -29994389 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1627 936 247 14 18 chrX 136656120 136656343 -29993953 + ID_B1 SINE B4 3 224 0 3 1627 342 188 37 127 chrX 136656593 136656727 -29993569 + L1MA9 LINE L1 6190 6311 -1 2 1627 396 206 49 0 chrX 136656773 136656875 -29993421 + L1M4 LINE L1 4142 4248 -1898 3 1627 5618 53 12 15 chrX 136656877 136657219 -29993077 - MusHAL1 LINE L1 -571 2141 1805 3 1627 2519 75 8 17 chrX 136657219 136657570 -29992726 - L1Md_F2 LINE L1 -1 6581 6234 3 1627 5618 53 12 15 chrX 136657570 136658032 -29992264 - MusHAL1 LINE L1 -908 1804 1339 3 1627 294 285 43 26 chrX 136658031 136658147 -29992149 + L1M4 LINE L1 4239 4356 -1790 3 1627 508 248 12 6 chrX 136658146 136658308 -29991988 + L1M4 LINE L1 4441 4603 -1540 3 1627 1646 286 24 7 chrX 136658423 136658965 -29991331 - Lx8 LINE L1 -247 7226 6676 3 1627 1246 186 169 11 chrX 136658981 136659253 -29991043 + MTC LTR MaLR 4 318 -103 3 1627 2744 166 17 0 chrX 136659253 136659790 -29990506 - Lx3C LINE L1 -621 6355 5810 3 1627 3004 112 121 10 chrX 136659791 136660294 -29990002 + Lx3C LINE L1 6417 6975 -1 3 1627 1108 162 60 1 chrX 136660313 136660524 -29989772 + MTC LTR MaLR 184 421 0 3 1627 382 295 107 90 chrX 136660576 136660709 -29989587 + L1M4 LINE L1 4607 4722 -1418 3 1627 591 234 61 50 chrX 136660709 136660907 -29989389 + B3 SINE B2 4 203 -13 3 1627 786 254 131 24 chrX 136660907 136661473 -29988823 + L1M4 LINE L1 4723 5324 -822 3 1627 7383 210 80 25 chrX 136661941 136663339 -29986957 - Lx6 LINE L1 -33 7427 5958 3 1627 2052 127 56 9 chrX 136663339 136663680 -29986616 - L1_Mus4 LINE L1 -10 6626 6270 3 1627 16477 152 53 17 chrX 136663680 136664401 -29985895 - Lx6 LINE L1 -1503 5957 5195 3 1627 216 0 0 0 chrX 136664401 136664425 -29985871 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1627 16477 146 50 16 chrX 136664425 136666120 -29984176 - Lx6 LINE L1 -686 5194 3478 3 1627 798 11 0 0 chrX 136666120 136666211 -29984085 + (TG)n Simple_repeat Simple_repeat 2 92 0 3 1627 16477 146 50 16 chrX 136666211 136667155 -29983141 - Lx6 LINE L1 -2403 3477 2469 3 1627 365 202 20 29 chrX 136667154 136667256 -29983040 - Lx6 LINE L1 -7519 209 109 3 1627 356 204 23 25 chrX 136667585 136667698 -29982598 - L1M5 LINE L1 -559 5615 5510 3 1627 240 319 68 8 chrX 136669050 136669167 -29981129 - L2a LINE L2 -17 3409 3286 3 1627 333 299 0 0 chrX 136669231 136669308 -29980988 + ID4 SINE ID 4 80 -3 3 1627 315 329 123 44 chrX 136669647 136670150 -29980146 - L2a LINE L2 -581 2838 2296 3 1627 751 260 24 19 chrX 136670296 136670504 -29979792 + B3 SINE B2 2 210 -6 3 1627 536 234 18 0 chrX 136670594 136670705 -29979591 + B1_Mur4 SINE Alu 13 125 -25 3 1627 404 212 136 75 chrX 136671185 136671384 -29978912 - L1MD2 LINE L1 -10 6349 6139 3 1627 559 284 119 23 chrX 136671491 136671799 -29978497 - MLT1A0 LTR MaLR -26 382 2 3 1627 400 252 87 0 chrX 136671799 136671914 -29978382 - L1MD2 LINE L1 -521 5721 5597 3 1627 180 0 0 0 chrX 136671920 136671940 -29978356 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1627 493 200 64 0 chrX 136672068 136672193 -29978103 - L1MD2 LINE L1 -667 5575 5443 3 1627 266 0 0 29 chrX 136672506 136672541 -29977755 + (TTA)n Simple_repeat Simple_repeat 2 35 0 3 1627 6744 103 23 7 chrX 136672546 136673530 -29976766 - Lx3A LINE L1 -56 6925 5926 3 1627 3301 95 6 11 chrX 136673524 136673990 -29976306 - Lx3B LINE L1 -886 6087 5624 3 1627 479 294 42 30 chrX 136674147 136674312 -29975984 + MER63A DNA AcHobo 44 210 0 3 1627 1329 246 56 0 chrX 136674349 136674589 -29975707 + Lx9 LINE L1 7239 7485 -159 3 1627 315 71 0 0 chrX 136674589 136674631 -29975665 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1627 1329 246 56 0 chrX 136674631 136674764 -29975532 + Lx9 LINE L1 7486 7632 -12 3 1627 227 318 59 0 chrX 136674801 136674886 -29975410 - MIRb SINE MIR -60 208 119 3 1627 725 240 11 0 chrX 136675446 136675621 -29974675 + Lx9 LINE L1 7239 7415 -229 3 1627 330 241 56 25 chrX 136675931 136676093 -29974203 - Charlie5 DNA MER1_type -1 2623 2457 3 1627 272 169 51 0 chrX 136676249 136676308 -29973988 - B1F1 SINE Alu -47 102 41 3 1627 326 286 159 39 chrX 136676449 136676631 -29973665 + B3 SINE B2 1 204 -12 3 1627 222 37 0 0 chrX 136676633 136676660 -29973636 + (TAA)n Simple_repeat Simple_repeat 1 27 0 3 1627 993 205 261 28 chrX 136676668 136677055 -29973241 - MER31A LTR ERV1 -8 477 1 3 1627 585 52 0 0 chrX 136677812 136677889 -29972407 + (TG)n Simple_repeat Simple_repeat 2 78 0 3 1627 551 244 8 0 chrX 136678422 136678541 -29971755 + MER5A DNA MER1_type 1 120 -69 3 1627 462 244 125 8 chrX 136678551 136678671 -29971625 + RSINE1 SINE B4 3 136 -29 3 1627 200 150 24 24 chrX 136678686 136678727 -29971569 + CT-rich Low_complexity Low_complexity 3 43 0 3 1627 441 0 0 0 chrX 136678733 136678782 -29971514 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1627 202 254 0 53 chrX 136678949 136679024 -29971272 + (TATATG)n Simple_repeat Simple_repeat 3 73 0 3 1627 477 0 0 0 chrX 136679660 136679713 -29970583 + (TC)n Simple_repeat Simple_repeat 1 53 0 3 1627 899 269 88 20 chrX 136680527 136680721 -29969575 + MTEb LTR MaLR 6 217 -162 3 1627 4450 79 3 0 chrX 136680721 136681292 -29969004 - L1_Mus1 LINE L1 0 6567 5995 3 1627 899 269 88 20 chrX 136681292 136681438 -29968858 + MTEb LTR MaLR 218 369 -10 3 1627 29 28 0 0 chrX 136682241 136682277 -29968019 + AT_rich Low_complexity Low_complexity 1 36 0 3 1627 365 262 62 54 chrX 136682293 136682422 -29967874 - B1F SINE Alu 0 149 20 3 1627 35 24 0 0 chrX 136682447 136682489 -29967807 + AT_rich Low_complexity Low_complexity 1 42 0 3 1627 354 297 102 13 chrX 136682829 136682986 -29967310 + L1M4c LINE L1 714 884 -5500 3 1627 2756 91 10 12 chrX 136683044 136683445 -29966851 + L1_Mus3 LINE L1 6239 6638 0 3 1627 228 263 105 0 chrX 136683504 136683561 -29966735 + L1M3c LINE L1 2 64 -6077 3 1627 300 53 0 0 chrX 136683570 136683608 -29966688 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1627 271 231 0 173 chrX 136683636 136683746 -29966550 + PB1D10 SINE Alu 27 117 0 3 1627 723 10 31 0 chrX 136683976 136684072 -29966224 + (CA)n Simple_repeat Simple_repeat 2 100 0 3 1627 549 319 41 18 chrX 136684094 136684404 -29965892 + L1MB8 LINE L1 5842 6150 -21 3 1627 243 0 0 0 chrX 136684835 136684862 -29965434 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 1627 213 43 20 61 chrX 136686091 136686140 -29964156 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 3 1627 234 0 0 0 chrX 136686777 136686803 -29963493 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1627 344 0 65 0 chrX 136686969 136687015 -29963281 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 3 1627 3762 66 40 4 chrX 136687260 136687765 -29962531 - L1_Mus1 LINE L1 0 6567 6045 3 1627 468 343 52 107 chrX 136687994 136688490 -29961806 + L2a LINE L2 2919 3426 0 3 1627 286 353 83 48 chrX 136688638 136688867 -29961429 - L2c LINE L2 -1 3386 3150 3 1627 558 300 129 25 chrX 136689365 136689645 -29960651 + MamRep605 Unknown Unknown 308 616 -260 3 1627 546 119 0 0 chrX 136689722 136689806 -29960490 + (TA)n Simple_repeat Simple_repeat 2 85 0 3 1627 198 0 0 0 chrX 136690088 136690110 -29960186 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 3 1627 356 276 119 58 chrX 136690498 136690759 -29959537 + L1M5 LINE L1 5312 5588 -536 3 1627 821 192 7 0 chrX 136690945 136691091 -29959205 - B1_Mur4 SINE Alu -1 149 3 3 1627 1932 256 88 62 chrX 136691094 136691917 -29958379 - Kanga11a DNA Tc2 -76 894 51 3 1627 25 0 0 28 chrX 136692317 136692331 -29957965 + AT_rich Low_complexity Low_complexity 1 14 0 3 1627 987 210 108 0 chrX 136692331 136692526 -29957770 - B3 SINE B2 0 216 1 3 1627 25 0 0 28 chrX 136692526 136692547 -29957749 + AT_rich Low_complexity Low_complexity 1 21 0 3 1627 510 161 127 0 chrX 136693693 136693811 -29956485 + B1F1 SINE Alu 17 149 0 3 1627 3897 292 76 61 chrX 136695221 136695516 -29954780 + Lx8 LINE L1 5650 5946 -1527 3 1627 426 20 0 0 chrX 136695516 136695567 -29954729 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1627 3897 292 76 61 chrX 136695567 136695711 -29954585 + Lx8 LINE L1 5947 6099 -1374 3 1627 396 148 0 0 chrX 136695711 136695772 -29954524 + RMER6B LTR ERVK 345 405 -56 3 1627 3897 292 76 61 chrX 136695772 136696925 -29953371 + Lx8 LINE L1 6100 7327 -146 3 1627 448 247 21 0 chrX 136696929 136697022 -29953274 + B3A SINE B2 1 95 -103 3 1627 396 0 0 0 chrX 136697083 136697127 -29953169 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1627 459 0 0 0 chrX 136697127 136697177 -29953119 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 1627 548 248 0 0 chrX 136697447 136697568 -29952728 + B3 SINE B2 1 121 -95 3 1627 619 294 36 6 chrX 136697569 136697737 -29952559 - B3A SINE B2 -25 173 1 3 1627 198 0 0 0 chrX 136697910 136697932 -29952364 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1627 183 80 0 0 chrX 136697967 136697992 -29952304 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1627 424 257 107 49 chrX 136699182 136699401 -29950895 - RMER10A LTR ERVL -76 366 135 3 1627 2283 131 69 71 chrX 136699401 136699910 -29950386 + RLTR28 LTR ERVL 1 508 -16 3 1627 718 156 0 32 chrX 136699927 136700053 -29950243 - RMER10A LTR ERVL -319 123 2 3 1627 196 282 11 23 chrX 136700739 136700826 -29949470 + MER5A DNA MER1_type 8 93 -96 3 1627 507 285 0 21 chrX 136700950 136701090 -29949206 - ID_B1 SINE B4 -9 215 79 3 1627 440 317 165 19 chrX 136701784 136702032 -29948264 + MER44B DNA MER2_type 1 283 -267 3 1627 238 368 0 11 chrX 136702036 136702124 -29948172 + MER44B DNA MER2_type 464 550 0 3 1627 195 295 115 0 chrX 136702201 136702279 -29948017 + MIRc SINE MIR 109 195 -73 3 1627 1191 264 28 58 chrX 136703501 136703899 -29946397 + MLT1B LTR MaLR 1 386 -4 3 1627 1501 164 44 159 chrX 136703908 136704342 -29945954 - ORR1C2 LTR MaLR 0 384 1 3 1627 1126 64 14 0 chrX 136704708 136704848 -29945448 + B1_Mus1 SINE Alu 1 142 -6 3 1627 414 0 0 0 chrX 136704850 136704896 -29945400 + (GA)n Simple_repeat Simple_repeat 1 46 0 3 1627 256 289 120 69 chrX 136704915 136705131 -29945165 + MIR SINE MIR 2 228 -34 3 1627 279 0 0 0 chrX 136705422 136705453 -29944843 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1627 426 241 155 0 chrX 136705759 136705875 -29944421 + RSINE1 SINE B4 1 134 -31 3 1627 478 326 0 22 chrX 136706142 136706277 -29944019 + B1F SINE Alu 2 133 -16 3 1627 292 298 15 95 chrX 136706270 136706407 -29943889 + ID_B1 SINE B4 51 176 -48 3 1627 364 204 74 21 chrX 136706323 136706418 -29943878 + PB1D7 SINE Alu 10 109 -11 3 1627 239 114 0 22 chrX 136707211 136707256 -29943040 + (TC)n Simple_repeat Simple_repeat 2 45 0 3 1627 192 279 65 65 chrX 136707355 136707447 -29942849 - L2c LINE L2 -7 3380 3289 3 1627 621 275 7 7 chrX 136707862 136708005 -29942291 - B1_Mur1 SINE Alu -5 144 2 3 203 205 279 131 0 chrX 136708086 136708147 -29942149 - L2c LINE L2 -671 2748 2680 3 1628 269 244 88 11 chrX 136708737 136708828 -29941468 + MLT1M LTR MaLR 226 323 -349 4 1628 735 22 0 0 chrX 136709196 136709285 -29941011 + (TC)n Simple_repeat Simple_repeat 2 90 0 4 1628 387 0 0 0 chrX 136709285 136709327 -29940969 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1628 187 157 19 19 chrX 136709738 136709790 -29940506 + GA-rich Low_complexity Low_complexity 3 54 0 4 1628 221 289 114 36 chrX 136710072 136710212 -29940084 + MIR SINE MIR 48 203 -65 4 1628 3570 216 59 97 chrX 136711393 136712813 -29937483 + RMER1A Other Other 7 1026 -4 4 1628 599 300 63 49 chrX 136712849 136713226 -29937070 + MLT1B LTR MaLR 1 365 -25 4 1628 22 35 0 0 chrX 136713665 136713694 -29936602 + AT_rich Low_complexity Low_complexity 1 29 0 4 1628 387 219 7 117 chrX 136713709 136713854 -29936442 + B3A SINE B2 70 198 0 4 1628 382 130 174 0 chrX 136714580 136714649 -29935647 + ID4 SINE ID 3 83 0 4 1628 547 241 15 15 chrX 136715028 136715163 -29935133 + MTE2b LTR MaLR 81 215 -164 4 1628 476 258 24 16 chrX 136715189 136715315 -29934981 + MTE2b LTR MaLR 201 327 -52 4 1628 225 0 0 0 chrX 136715315 136715340 -29934956 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 4 1628 608 311 33 120 chrX 136715342 136715675 -29934621 + ORR1E LTR MaLR 54 357 -2 4 1628 519 351 84 55 chrX 136715871 136716323 -29933973 - MLT1J LTR MaLR -3 509 45 4 1628 506 277 57 13 chrX 136716457 136716684 -29933612 + L2 LINE L2 1852 2088 -1331 4 1628 838 201 0 0 chrX 136717075 136717224 -29933072 + B1_Mur1 SINE Alu 1 149 0 4 1628 560 251 101 30 chrX 136717246 136717414 -29932882 + B4 SINE B4 43 222 -70 4 1628 452 222 82 41 chrX 136717411 136717533 -29932763 - MTEb LTR MaLR -252 127 1 4 1628 816 260 11 6 chrX 136717600 136717774 -29932522 + B3 SINE B2 2 176 -40 4 1628 4197 60 5 14 chrX 136718076 136718630 -29931666 + L1_Mus3 LINE L1 6087 6635 -3 4 1628 342 278 17 17 chrX 136719273 136719390 -29930906 + PB1D9 SINE Alu 3 119 -1 4 1628 1199 57 0 0 chrX 136720114 136720255 -29930041 + B1_Mm SINE Alu 1 141 -6 4 1628 216 0 0 0 chrX 136720257 136720281 -29930015 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1628 655 328 35 13 chrX 136720375 136720607 -29929689 - LTR16C LTR ERVL -7 482 246 4 1628 339 202 0 0 chrX 136721294 136721388 -29928908 + (TG)n Simple_repeat Simple_repeat 2 95 0 4 1628 444 326 55 27 chrX 136721388 136721571 -29928725 - LTR16C LTR ERVL -4 485 298 4 1628 288 0 0 0 chrX 136721573 136721605 -29928691 + (TGG)n Simple_repeat Simple_repeat 1 32 0 4 1628 640 264 131 41 chrX 136721605 136721873 -29928423 - B4A SINE B4 0 292 1 4 1628 252 328 251 5 chrX 136722198 136722385 -29927911 + MIR SINE MIR 20 252 -10 4 1628 486 214 0 0 chrX 136722412 136722515 -29927781 - L1MC5 LINE L1 -867 7094 6992 4 1628 21 0 0 0 chrX 136722763 136722784 -29927512 + AT_rich Low_complexity Low_complexity 1 21 0 4 1628 268 186 132 3 chrX 136722892 136722980 -29927316 + B1_Mur1 SINE Alu 43 148 -1 4 1628 261 250 83 0 chrX 136722992 136723064 -29927232 + MER45A DNA Tip100 70 147 -31 4 1628 1077 104 0 0 chrX 136723190 136723353 -29926943 - L1_Mus3 LINE L1 -692 5946 5784 4 1628 1202 56 0 0 chrX 136723354 136723514 -29926782 - L1_Mus1 LINE L1 -1 6566 6407 4 1628 1711 78 0 0 chrX 136723511 136723741 -29926555 - L1_Mus3 LINE L1 -116 5767 5538 4 1628 5402 67 4 0 chrX 136723742 136724439 -29925857 + L1_Mus3 LINE L1 5939 6638 0 4 1628 794 202 160 5 chrX 136724460 136724654 -29925642 + URR1B DNA MER1_type 2 225 0 4 1628 180 111 0 0 chrX 136724934 136724961 -29925335 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1628 240 35 0 0 chrX 136725516 136725545 -29924751 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1628 306 0 0 0 chrX 136725545 136725578 -29924718 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 1628 183 156 0 0 chrX 136725589 136725621 -29924675 + (CATA)n Simple_repeat Simple_repeat 2 33 0 4 1628 221 347 115 60 chrX 136726914 136727079 -29923217 + L2a LINE L2 2409 2599 -820 4 1628 3068 12 3 0 chrX 136727079 136727424 -29922872 + ORR1A0 LTR MaLR 1 346 0 4 1628 221 347 115 60 chrX 136727424 136727589 -29922707 + L2a LINE L2 2600 2757 -662 4 1628 337 263 120 26 chrX 136727995 136728112 -29922184 - B4A SINE B4 -155 137 10 4 1628 471 346 150 21 chrX 136728119 136728715 -29921581 + L2a LINE L2 2747 3424 -2 4 1628 365 374 27 0 chrX 136728741 136728888 -29921408 + LTR88c LTR Genie? 23 173 -689 4 1628 1713 258 8 11 chrX 136729077 136729442 -29920854 + MTEa LTR MaLR 16 379 0 4 1628 508 322 43 37 chrX 136729676 136729863 -29920433 + LTR88c LTR Genie? 234 421 -441 4 1628 198 71 0 0 chrX 136729873 136729901 -29920395 + (CAG)n Simple_repeat Simple_repeat 1 28 0 4 1628 209 308 26 0 chrX 136730815 136730893 -29919403 - L3b LINE CR1 -139 343 264 4 1628 555 364 104 35 chrX 136731322 136732019 -29918277 + L2a LINE L2 2673 3416 -10 4 1628 339 294 19 38 chrX 136732023 136732129 -29918167 - PB1D10 SINE Alu 0 117 14 4 1628 1300 284 138 40 chrX 136732206 136732322 -29917974 + L1MC LINE L1 3315 3446 -2700 4 1628 189 0 0 0 chrX 136732322 136732343 -29917953 + (CAA)n Simple_repeat Simple_repeat 1 21 0 4 1628 1300 284 138 40 chrX 136732343 136732862 -29917434 + L1MC LINE L1 3447 4047 -2099 4 1628 342 80 0 0 chrX 136732862 136732912 -29917384 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1628 1300 284 138 40 chrX 136732912 136733067 -29917229 + L1MC LINE L1 4048 4225 -1921 4 1628 945 187 101 29 chrX 136733067 136733276 -29917020 - URR1B DNA MER1_type -1 224 1 4 1628 1300 284 138 40 chrX 136733276 136733584 -29916712 + L1MC LINE L1 4226 4523 -1623 4 1628 464 355 19 13 chrX 136733585 136733739 -29916557 + RSINE1 SINE B4 11 165 0 4 1628 222 136 0 22 chrX 136733786 136733831 -29916465 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1628 275 301 126 0 chrX 136733890 136733993 -29916303 - PB1 SINE Alu -9 118 3 4 1628 229 209 0 0 chrX 136733996 136734039 -29916257 + MLT1A1 LTR MaLR 366 408 0 4 1628 261 270 0 16 chrX 136734051 136734115 -29916181 + G-rich Low_complexity Low_complexity 4 66 0 4 1628 1414 253 47 7 chrX 136734743 136735149 -29915147 + Lx6 LINE L1 7013 7434 -26 4 1628 303 273 0 0 chrX 136735748 136735825 -29914471 + ID4_ SINE ID 1 77 -6 4 1628 618 191 7 87 chrX 136735884 136736033 -29914263 + B1_Mur1 SINE Alu 1 137 -12 4 1628 185 0 0 39 chrX 136736033 136736059 -29914237 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 4 1628 234 351 25 49 chrX 136737051 136737083 -29913213 - B4A SINE B4 -127 165 87 4 1628 246 286 0 0 chrX 136737083 136737132 -29913164 - B1F1 SINE Alu -99 50 2 4 1628 1722 223 54 21 chrX 136737767 136738156 -29912140 + MTD LTR MaLR 18 419 0 4 1628 226 302 0 100 chrX 136739656 136739726 -29910570 + ID2 SINE ID 1 63 -20 4 1628 425 50 17 0 chrX 136739727 136739787 -29910509 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 1628 240 250 41 20 chrX 136739788 136739886 -29910410 + (CAGAGA)n Simple_repeat Simple_repeat 3 102 0 4 1628 357 24 0 0 chrX 136740374 136740416 -29909880 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 4 1628 323 197 42 14 chrX 136740416 136740488 -29909808 - ID4_ SINE ID -8 75 2 4 1628 761 298 75 52 chrX 136743063 136743653 -29906643 - L2a LINE L2 -3 3423 2814 4 1628 450 322 81 11 chrX 136744445 136744630 -29905666 - MIR SINE MIR -61 201 4 4 1628 584 298 47 28 chrX 136744686 136745160 -29905136 - L1M5 LINE L1 -605 5519 5037 4 1628 456 299 35 7 chrX 136745162 136745307 -29904989 - B1F1 SINE Alu 0 149 1 4 1628 518 329 101 83 chrX 136745688 136746026 -29904270 - L2c LINE L2 -1 3386 3043 4 1628 892 255 38 10 chrX 136746321 136746610 -29903686 + L1MA5 LINE L1 6002 6298 -2 4 1628 545 229 0 9 chrX 136748179 136748285 -29902011 + B1F SINE Alu 38 142 -7 4 1628 290 342 26 17 chrX 136749347 136749463 -29900833 + L2c LINE L2 3262 3378 -9 4 1628 299 311 25 12 chrX 136749744 136749843 -29900453 - MIR SINE MIR -149 119 19 4 1628 450 273 0 0 chrX 136750605 136750726 -29899570 + L1M4 LINE L1 4830 4950 -1196 4 1628 419 330 84 42 chrX 136750734 136750924 -29899372 + B4A SINE B4 2 199 -93 4 1628 348 196 14 1 chrX 136750980 136751078 -29899218 + L1M4 LINE L1 4935 5033 -1113 4 1628 26 0 0 0 chrX 136751375 136751401 -29898895 + AT_rich Low_complexity Low_complexity 1 26 0 4 1628 1213 41 7 0 chrX 136751401 136751547 -29898749 - B1_Mus1 SINE Alu 0 148 2 4 1628 1540 239 16 83 chrX 136751590 136751766 -29898530 + MTE2a LTR MaLR 15 180 -199 4 1628 866 201 89 6 chrX 136751766 136751946 -29898350 - B3 SINE B2 -19 197 3 4 1628 1540 239 16 83 chrX 136751946 136752153 -29898143 + MTE2a LTR MaLR 181 372 -7 4 1628 1006 325 96 17 chrX 136752271 136752856 -29897440 + Lx8 LINE L1 6834 7464 -9 4 1628 676 281 6 6 chrX 136753579 136753740 -29896556 + RSINE1 SINE B4 1 161 -4 4 1628 593 328 102 100 chrX 136753802 136754157 -29896139 - L2 LINE L2 -874 2545 2182 4 1628 1046 139 28 17 chrX 136754157 136754333 -29895963 + B2_Mm2 SINE B2 1 178 -17 4 1628 593 328 102 100 chrX 136754333 136754396 -29895900 - L2 LINE L2 -1238 2181 2157 4 1628 450 0 0 0 chrX 136754396 136754446 -29895850 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 1628 593 328 102 100 chrX 136754446 136754561 -29895735 - L2 LINE L2 -1263 2156 2041 4 1628 381 58 0 0 chrX 136754561 136754613 -29895683 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1628 593 328 102 100 chrX 136754613 136754819 -29895477 - L2 LINE L2 -1379 2040 1802 4 1628 825 272 81 31 chrX 136754835 136755269 -29895027 - L1ME3A LINE L1 -1 6172 5683 4 1628 702 131 0 0 chrX 136755355 136755477 -29894819 + (TC)n Simple_repeat Simple_repeat 2 123 0 4 1628 651 252 8 8 chrX 136755487 136755615 -29894681 - B1F SINE Alu -9 140 13 4 1628 218 267 24 107 chrX 136755671 136755755 -29894541 - PB1D10 SINE Alu -38 79 3 4 1628 212 56 54 36 chrX 136756075 136756131 -29894165 + (TTTTTA)n Simple_repeat Simple_repeat 2 58 0 4 1628 1247 41 0 0 chrX 136756133 136756279 -29894017 - B1_Mm SINE Alu 0 147 2 4 1628 577 259 20 34 chrX 136756314 136756462 -29893834 - RSINE1 SINE B4 -2 163 18 4 1628 493 219 8 74 chrX 136756588 136756711 -29893585 + PB1D7 SINE Alu 5 126 -1 4 1628 655 308 0 5 chrX 136756842 136757044 -29893252 + Lx7 LINE L1 7106 7306 -390 4 1628 232 295 0 11 chrX 136757133 136757222 -29893074 + Lx7 LINE L1 7586 7673 -23 4 1628 717 299 48 26 chrX 136757468 136757691 -29892605 + B4A SINE B4 3 230 -62 5 1628 672 303 85 53 chrX 136757691 136757973 -29892323 + B4 SINE B4 2 292 0 5 1628 351 0 0 0 chrX 136758007 136758046 -29892250 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1628 268 212 47 0 chrX 136758080 136758165 -29892131 - Lx9 LINE L1 -1 7643 7555 5 1628 1937 269 122 14 chrX 136758313 136759355 -29890941 - L1MA6 LINE L1 0 6300 5142 5 1628 351 300 58 8 chrX 136759382 136759503 -29890793 - PB1 SINE Alu 0 127 1 5 1628 606 200 139 31 chrX 136759536 136759665 -29890631 + B1_Mur3 SINE Alu 6 148 -1 5 1628 1841 252 86 40 chrX 136759685 136760545 -29889751 - L1MB5 LINE L1 -57 6117 5217 5 1628 586 275 41 5 chrX 136760552 136760771 -29889525 - L1MB5 LINE L1 -2217 3923 3697 5 1628 473 241 35 18 chrX 136760792 136760906 -29889390 - PB1D10 SINE Alu -1 116 1 5 1628 185 361 58 16 chrX 136761329 136761450 -29888846 - L3b LINE CR1 -207 275 150 5 1628 40 21 0 0 chrX 136762211 136762258 -29888038 + AT_rich Low_complexity Low_complexity 1 47 0 5 1628 1083 251 42 6 chrX 136762268 136762605 -29887691 - L1MC4a LINE L1 -449 7433 7085 5 1628 868 184 143 14 chrX 136762645 136762854 -29887442 - Lx5 LINE L1 -3 7047 6812 5 1628 281 276 48 0 chrX 136762861 136762966 -29887330 - L1MC4a LINE L1 -821 7061 6952 5 1628 693 0 0 0 chrX 136763028 136763105 -29887191 + (TC)n Simple_repeat Simple_repeat 2 78 0 5 1628 1171 56 0 0 chrX 136763105 136763248 -29887048 - B1_Mus2 SINE Alu -4 143 1 5 1628 262 320 168 40 chrX 136763257 136763579 -29886717 - L1M5 LINE L1 -1113 5033 4671 5 1628 33232 70 16 3 chrX 136763572 136769497 -29880799 - L1Md_F2 LINE L1 -5 6577 570 5 1628 5022 40 14 3 chrX 136769527 136770146 -29880150 - L1Md_F3 LINE L1 -12 6572 5947 5 1628 1021 259 139 15 chrX 136770169 136770506 -29879790 + MTEa LTR MaLR 1 379 0 5 1628 339 248 41 81 chrX 136770506 136770629 -29879667 - L1M5 LINE L1 -1491 4655 4538 5 1628 775 225 154 30 chrX 136770740 136771006 -29879290 + Looper DNA PiggyBac 506 804 -754 5 1628 1217 246 38 46 chrX 136771197 136771568 -29878728 + ORR1D2 LTR MaLR 3 370 0 5 1628 694 281 5 67 chrX 136771578 136771788 -29878508 - ID_B1 SINE B4 -5 219 23 5 1628 366 245 139 12 chrX 136771741 136771906 -29878390 + Looper DNA PiggyBac 1370 1555 -3 5 1628 1312 256 44 63 chrX 136772539 136772650 -29877646 + ORR1E LTR MaLR 1 102 -257 5 1628 1029 114 0 7 chrX 136772650 136772791 -29877505 + B1_Mur4 SINE Alu 1 140 -10 5 1628 1312 256 44 63 chrX 136772791 136773045 -29877251 + ORR1E LTR MaLR 103 359 0 5 1628 1090 256 34 16 chrX 136773246 136773627 -29876669 - L1MA4A LINE L1 -400 5903 5516 5 1628 300 296 111 0 chrX 136773630 136773738 -29876558 - L1M4 LINE L1 -852 5294 5175 5 1628 390 284 42 0 chrX 136773738 136773833 -29876463 - PB1D10 SINE Alu 0 117 19 5 1628 683 309 15 25 chrX 136774098 136774297 -29875999 - B3A SINE B2 0 198 2 5 1628 890 238 20 5 chrX 136774349 136774552 -29875744 - B3 SINE B2 -8 208 3 5 1628 26 0 0 0 chrX 136774681 136774707 -29875589 + AT_rich Low_complexity Low_complexity 1 26 0 5 1628 326 266 50 92 chrX 136774729 136774870 -29875426 - L1M4 LINE L1 -1350 4796 4662 5 1628 288 0 0 0 chrX 136774878 136774910 -29875386 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 1628 283 197 0 15 chrX 136774981 136775048 -29875248 - L1M4 LINE L1 -1809 4337 4272 5 1628 1214 201 14 4 chrX 136775492 136775771 -29874525 - Lx9 LINE L1 -94 7550 7269 5 1628 381 314 59 0 chrX 136775932 136776050 -29874246 + PB1 SINE Alu 1 125 -2 5 1628 523 286 0 18 chrX 136776505 136776619 -29873677 + PB1D10 SINE Alu 6 117 0 5 1628 681 266 80 27 chrX 136776711 136777259 -29873037 - HAL1 LINE L1 -1008 1499 923 5 1628 368 111 16 0 chrX 136777269 136777332 -29872964 + (TCTCCC)n Simple_repeat Simple_repeat 3 66 0 5 1628 375 23 0 0 chrX 136777332 136777376 -29872920 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1628 351 290 93 0 chrX 136777438 136777545 -29872751 - PB1D10 SINE Alu 0 117 1 5 1628 4676 221 112 32 chrX 136777688 136779102 -29871194 + Tigger6b DNA MER2_type 65 1591 -6 5 1628 309 346 116 32 chrX 136779103 136779354 -29870942 - HAL1 LINE L1 -1814 693 422 5 1628 356 246 122 104 chrX 136779449 136779671 -29870625 - HAL1 LINE L1 -2221 286 61 5 1628 262 345 26 34 chrX 136779780 136779897 -29870399 + PB1D10 SINE Alu 1 116 -1 5 1628 218 250 0 0 chrX 136779998 136780046 -29870250 + G-rich Low_complexity Low_complexity 1 48 0 5 1628 273 312 13 13 chrX 136780048 136780126 -29870170 + ID4 SINE ID 2 79 -4 5 1628 678 258 159 11 chrX 136780466 136780737 -29869559 - ORR1E LTR MaLR -48 311 1 5 1628 524 342 69 65 chrX 136780775 136781253 -29869043 - MLT1J LTR MaLR 0 512 33 5 1628 1166 247 92 28 chrX 136781785 136782161 -29868135 - MTD LTR MaLR -14 405 18 5 1628 481 318 28 17 chrX 136782177 136782350 -29867946 - LTR53 LTR ERVL -76 443 269 5 1628 1778 188 52 28 chrX 136782350 136782750 -29867546 + MTD LTR MaLR 2 411 -8 5 1628 261 286 0 28 chrX 136782748 136782820 -29867476 - LTR53 LTR ERVL -240 279 210 5 1628 908 279 75 30 chrX 136782989 136783351 -29866945 + MLT1D LTR MaLR 128 505 0 5 1628 487 331 22 11 chrX 136783351 136783531 -29866765 - MIRb SINE MIR -9 259 78 5 1628 685 269 124 35 chrX 136784606 136784960 -29865336 + L1ME4a LINE L1 5516 5901 -223 5 1628 330 336 9 0 chrX 136785256 136785366 -29864930 + PB1D10 SINE Alu 6 116 -1 5 1628 216 158 0 0 chrX 136786699 136786737 -29863559 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 1628 738 298 23 66 chrX 136786997 136787302 -29862994 + Lx8 LINE L1 7172 7463 -10 5 1628 468 0 0 0 chrX 136787400 136787452 -29862844 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1628 1011 113 0 0 chrX 136787616 136787758 -29862538 - B1_Mus1 SINE Alu -5 143 2 5 1628 613 246 28 14 chrX 136787967 136788111 -29862185 + RSINE1 SINE B4 3 148 -17 5 1628 690 156 206 39 chrX 136788491 136788671 -29861625 + B3 SINE B2 1 210 -6 5 1628 24 0 0 0 chrX 136788871 136788895 -29861401 + AT_rich Low_complexity Low_complexity 1 24 0 5 1628 750 326 64 102 chrX 136789072 136789653 -29860643 - MLT1E1 LTR MaLR 0 654 96 5 1628 1030 232 27 0 chrX 136789678 136789898 -29860398 + Lx6 LINE L1 7235 7460 0 5 1628 742 228 196 80 chrX 136790051 136790482 -29859814 + L1ME1 LINE L1 5107 5587 -592 5 1628 587 204 256 19 chrX 136790482 136790642 -29859654 + B3A SINE B2 1 198 0 5 1628 742 244 111 81 chrX 136790642 136790767 -29859529 + L1ME1 LINE L1 5588 5727 -452 5 1628 689 253 118 69 chrX 136791072 136791474 -29858822 + L1ME1 LINE L1 5733 6177 -2 5 1628 570 191 108 31 chrX 136791548 136791742 -29858554 + ORSL DNA Tip100 67 275 0 5 1628 325 107 18 0 chrX 136791840 136791896 -29858400 + HAL1b LINE L1 1402 1458 -551 5 1628 766 301 52 8 chrX 136791933 136792201 -29858095 + Tigger7 DNA MER2_type 24 303 -2188 5 1628 254 189 544 0 chrX 136792209 136792323 -29857973 + Tigger7 DNA MER2_type 2135 2310 -181 5 1628 657 226 22 0 chrX 136792456 136792593 -29857703 - B1_Mur1 SINE Alu -5 144 5 5 1628 447 63 0 0 chrX 136792703 136792766 -29857530 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 1628 559 226 135 0 chrX 136792773 136792906 -29857390 - B3A SINE B2 -47 151 1 5 1628 471 328 5 27 chrX 136792933 136793104 -29857192 - Tigger7 DNA MER2_type 0 2491 2323 5 1628 302 289 0 46 chrX 136793104 136793191 -29857105 + ID4 SINE ID 1 83 0 5 1628 471 328 5 27 chrX 136793191 136793204 -29857092 - Tigger7 DNA MER2_type -169 2322 2311 5 1628 845 252 81 52 chrX 136793229 136793434 -29856862 + L1MA6 LINE L1 5819 6036 -264 5 1628 628 286 181 19 chrX 136793434 136793542 -29856754 + MTE2b LTR MaLR 3 110 -269 5 1628 249 33 0 0 chrX 136793542 136793572 -29856724 + (TAA)n Simple_repeat Simple_repeat 2 31 0 5 1628 628 286 181 19 chrX 136793572 136793784 -29856512 + MTE2b LTR MaLR 111 374 -5 5 1628 845 252 81 52 chrX 136793784 136793925 -29856371 + L1MA6 LINE L1 6037 6175 -125 5 1628 924 131 109 15 chrX 136795171 136795372 -29854924 - Lx9 LINE L1 -5 7639 7420 5 1628 258 325 65 0 chrX 136795446 136795569 -29854727 + MIR SINE MIR 61 191 -71 5 1628 669 171 17 0 chrX 136795580 136795697 -29854599 + B1_Mur2 SINE Alu 15 133 -16 5 1628 374 94 16 0 chrX 136796215 136796279 -29854017 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 5 1628 206 335 148 55 chrX 136796531 136796715 -29853581 + L2 LINE L2 2401 2573 -846 5 1628 1217 123 16 11 chrX 136796715 136796904 -29853392 - B2_Mm2 SINE B2 -5 190 1 5 1628 206 335 148 55 chrX 136796904 136797010 -29853286 + L2 LINE L2 2574 2717 -702 5 1628 1196 266 20 97 chrX 136797374 136797777 -29852519 - MTE2a LTR MaLR -2 377 6 5 1628 272 158 34 34 chrX 136797802 136797860 -29852436 - ID_B1 SINE B4 -1 223 166 5 1628 770 285 14 10 chrX 136797860 136798069 -29852227 + B3 SINE B2 1 210 -6 5 1628 455 286 0 0 chrX 136798103 136798201 -29852095 - ID_B1 SINE B4 -46 178 81 5 1628 284 158 18 0 chrX 136798358 136798415 -29851881 + CT-rich Low_complexity Low_complexity 3 60 0 5 1628 429 256 66 110 chrX 136798418 136798554 -29851742 - B1_Mur2 SINE Alu -7 142 13 5 1628 183 74 0 0 chrX 136798588 136798594 -29851702 + (A)n Simple_repeat Simple_repeat 1 6 0 5 1628 1255 41 0 0 chrX 136798594 136798740 -29851556 + B1_Mm SINE Alu 2 147 0 5 1628 183 74 0 0 chrX 136798740 136798760 -29851536 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1628 458 255 69 13 chrX 136798760 136798919 -29851377 - L1MB3 LINE L1 -11 6172 6005 5 1628 381 296 93 12 chrX 136798930 136799091 -29851205 + MT2A LTR ERVL 353 526 -7 5 1628 1457 262 136 30 chrX 136799094 136799394 -29850902 - L1MB3 LINE L1 -256 5927 5562 5 1628 450 0 0 0 chrX 136799394 136799444 -29850852 + (TTTA)n Simple_repeat Simple_repeat 4 53 0 5 1628 1457 245 96 23 chrX 136799444 136799845 -29850451 - L1MB3 LINE L1 -622 5561 5152 5 1628 24 0 0 0 chrX 136799846 136799870 -29850426 + AT_rich Low_complexity Low_complexity 1 24 0 5 1628 481 308 35 25 chrX 136799998 136800238 -29850058 - MIR SINE MIR -27 241 2 5 1628 395 256 12 23 chrX 136800433 136800576 -29849720 + MIR SINE MIR 37 175 -101 5 1628 488 248 113 0 chrX 136801787 136801920 -29848376 + RSINE1 SINE B4 3 150 -15 5 1628 255 202 12 23 chrX 136801931 136802017 -29848279 + CT-rich Low_complexity Low_complexity 1 85 0 5 1628 1187 37 0 0 chrX 136802066 136802202 -29848094 + B1_Mus1 SINE Alu 4 139 -9 5 1628 188 35 35 0 chrX 136802202 136802231 -29848065 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 5 1628 228 231 127 47 chrX 136802568 136802718 -29847578 - L2 LINE L2 -521 2898 2737 5 1628 311 60 0 20 chrX 136804037 136804088 -29846208 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1628 216 0 0 0 chrX 136804566 136804590 -29845706 + (TC)n Simple_repeat Simple_repeat 1 24 0 6 1628 256 221 0 25 chrX 136804635 136804714 -29845582 + GA-rich Low_complexity Low_complexity 2 78 0 6 1628 198 268 17 62 chrX 136804860 136804956 -29845340 + MER5A DNA MER1_type 82 175 -3 6 1628 242 329 45 19 chrX 136805552 136805707 -29844589 + Charlie16a DNA MER1_type 85 243 -99 6 1628 282 391 26 0 chrX 136805907 136806022 -29844274 + B1F2 SINE Alu 1 118 -31 6 1628 525 270 130 34 chrX 136806077 136806284 -29844012 + B4A SINE B4 11 237 -55 6 1628 499 237 25 17 chrX 136806286 136806406 -29843890 + RSINE1 SINE B4 10 130 -35 6 1628 526 234 9 0 chrX 136806476 136806583 -29843713 + B1_Mur1 SINE Alu 36 143 -6 6 1628 354 318 68 81 chrX 136806481 136806642 -29843654 + B4 SINE B4 126 284 -8 6 1628 3135 30 0 16 chrX 136806714 136807090 -29843206 - L1Md_F2 LINE L1 -3 6579 6210 6 1628 266 73 24 0 chrX 136807091 136807132 -29843164 + L1_Mus2 LINE L1 6068 6109 -457 6 1628 810 56 0 0 chrX 136807230 136807338 -29842958 + (TG)n Simple_repeat Simple_repeat 2 109 0 6 1628 456 284 80 35 chrX 136808409 136808610 -29841686 + MIRb SINE MIR 43 252 -16 6 1628 777 160 0 0 chrX 136808699 136808843 -29841453 + CT-rich Low_complexity Low_complexity 2 145 0 6 1628 186 43 0 0 chrX 136810330 136810353 -29839943 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 1628 387 17 50 0 chrX 136810595 136810655 -29839641 + (CA)n Simple_repeat Simple_repeat 1 63 0 6 1628 180 0 0 0 chrX 136811511 136811531 -29838765 + (CA)n Simple_repeat Simple_repeat 2 21 0 6 1628 227 133 22 0 chrX 136812194 136812239 -29838057 + C-rich Low_complexity Low_complexity 3 48 0 6 1628 208 111 44 0 chrX 136812530 136812575 -29837721 + (CCG)n Simple_repeat Simple_repeat 2 48 0 6 1628 206 211 0 0 chrX 136812576 136812614 -29837682 + GA-rich Low_complexity Low_complexity 3 40 0 6 1628 310 80 20 0 chrX 136813186 136813236 -29837060 + HAL1-3A_ME LINE L1 1977 2027 -831 6 1628 441 0 0 0 chrX 136813387 136813436 -29836860 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1628 586 152 16 0 chrX 136813548 136813673 -29836623 + GA-rich Low_complexity Low_complexity 2 128 0 6 1628 774 0 0 0 chrX 136814326 136814412 -29835884 + (GA)n Simple_repeat Simple_repeat 2 87 0 6 1628 207 170 0 0 chrX 136815979 136816026 -29834270 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1628 352 96 55 0 chrX 136816061 136816134 -29834162 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 0 6 1628 629 83 21 0 chrX 136816661 136816757 -29833539 + (TAGA)n Simple_repeat Simple_repeat 4 101 0 6 1628 356 264 117 23 chrX 136817506 136817634 -29832662 - MER5A DNA MER1_type 0 189 50 6 1628 236 347 0 0 chrX 136819114 136819189 -29831107 - L2 LINE L2 -829 2590 2516 6 1628 639 0 0 0 chrX 136819889 136819960 -29830336 + (TC)n Simple_repeat Simple_repeat 1 71 0 6 1628 28 29 0 0 chrX 136822286 136822321 -29827975 + AT_rich Low_complexity Low_complexity 1 35 0 6 1628 189 245 0 0 chrX 136822837 136822886 -29827410 + (CATA)n Simple_repeat Simple_repeat 2 50 0 6 1628 297 75 0 0 chrX 136822915 136822955 -29827341 + (CTTA)n Simple_repeat Simple_repeat 4 43 0 6 1628 648 297 0 0 chrX 136822959 136823107 -29827189 - RSINE1 SINE B4 -15 150 3 6 1628 478 0 32 0 chrX 136823785 136823847 -29826449 + (CA)n Simple_repeat Simple_repeat 2 65 0 6 1628 322 151 14 14 chrX 136824265 136824339 -29825957 + CT-rich Low_complexity Low_complexity 3 76 0 6 1628 476 141 125 62 chrX 136824818 136825017 -29825279 - Lx9 LINE L1 -1 7643 7401 6 1628 800 177 227 6 chrX 136825031 136825207 -29825089 - B3 SINE B2 0 216 2 6 1628 243 0 0 0 chrX 136825750 136825777 -29824519 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 1628 441 0 0 0 chrX 136825777 136825825 -29824471 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1628 552 162 61 0 chrX 136825825 136825924 -29824372 - B1_Mur4 SINE Alu -32 118 14 6 1628 295 207 40 130 chrX 136825837 136825937 -29824359 - MT2B LTR ERVL -343 258 168 6 1628 249 310 25 107 chrX 136826326 136826485 -29823811 + MER104 DNA Tc2 36 181 0 6 1628 374 243 119 21 chrX 136826488 136826631 -29823665 + MIRb SINE MIR 103 259 -9 6 1628 247 220 20 0 chrX 136827330 136827380 -29822916 - PB1 SINE Alu -7 120 70 6 1628 1877 134 3 67 chrX 136827415 136827758 -29822538 + ORR1A4 LTR MaLR 1 321 -8 6 1628 347 245 9 61 chrX 136828330 136828479 -29821817 - MTEa LTR MaLR -42 337 180 6 1628 585 214 117 55 chrX 136828526 136828689 -29821607 - B3A SINE B2 -25 173 1 6 1628 232 330 42 89 chrX 136828691 136828881 -29821415 - MTEa LTR MaLR -171 188 8 6 1628 396 252 75 0 chrX 136829629 136829736 -29820560 - MER103 DNA DNA -3 163 49 6 1628 636 106 6 47 chrX 136830611 136830780 -29819516 + GA-rich Low_complexity Low_complexity 1 162 0 6 1628 243 329 0 14 chrX 136831304 136831378 -29818918 + CT-rich Low_complexity Low_complexity 1 73 0 6 1628 258 321 12 0 chrX 136831954 136832035 -29818261 - L2a LINE L2 -11 3415 3334 6 1628 306 227 136 0 chrX 136832073 136832161 -29818135 + RSINE1 SINE B4 3 102 -63 6 1628 1230 48 0 0 chrX 136832243 136832390 -29817906 - B1_Mm SINE Alu 0 147 1 6 1628 511 250 56 16 chrX 136832488 136832614 -29817682 + ID_B1 SINE B4 88 218 -6 6 1628 219 139 0 0 chrX 136832629 136832665 -29817631 + (ATG)n Simple_repeat Simple_repeat 3 38 0 6 1628 288 265 24 0 chrX 136833216 136833299 -29816997 + MIR SINE MIR 47 131 -131 6 1628 911 110 68 47 chrX 136833487 136833678 -29816618 - B2_Mm2 SINE B2 0 195 1 6 1628 737 305 63 99 chrX 136833865 136834341 -29815955 - MLT1F2 LTR MaLR -2 558 100 6 1628 215 0 0 62 chrX 136834517 136834549 -29815747 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 6 1628 660 221 6 70 chrX 136834886 136835042 -29815254 + B1_Mur1 SINE Alu 2 147 -2 6 1628 281 365 9 0 chrX 136835066 136835173 -29815123 - MLT1F2 LTR MaLR -452 108 1 6 1628 513 165 194 129 chrX 136835221 136835360 -29814936 + B1_Mur4 SINE Alu 2 149 -1 6 1628 349 309 48 0 chrX 136835986 136836112 -29814184 + MIR SINE MIR 44 175 -87 6 1628 288 0 0 0 chrX 136836215 136836247 -29814049 + (TC)n Simple_repeat Simple_repeat 1 32 0 6 1628 277 165 22 11 chrX 136836330 136836422 -29813874 + (TCTG)n Simple_repeat Simple_repeat 4 96 0 6 1628 374 0 22 0 chrX 136836424 136836470 -29813826 + (GA)n Simple_repeat Simple_repeat 1 47 0 6 1628 315 318 20 27 chrX 136836511 136836661 -29813635 - MIRc SINE MIR -97 165 22 6 1628 279 0 0 0 chrX 136836876 136836907 -29813389 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1628 546 118 0 0 chrX 136836907 136837009 -29813287 + (GA)n Simple_repeat Simple_repeat 1 102 0 6 1628 383 321 38 62 chrX 136837491 136837700 -29812596 + MamRep1879 DNA hAT? 12 215 -1 6 1628 697 124 31 0 chrX 136838002 136838163 -29812133 + (TG)n Simple_repeat Simple_repeat 1 166 0 6 1628 247 268 41 0 chrX 136838881 136838975 -29811321 + MIRc SINE MIR 55 152 -56 6 1629 296 344 16 13 chrX 136840988 136841123 -29809173 - MIR SINE MIR -57 151 25 6 1629 205 258 0 61 chrX 136841226 136841292 -29809004 + MIRm SINE MIR 204 265 -11 6 1629 324 0 0 0 chrX 136841434 136841470 -29808826 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 1629 216 91 0 64 chrX 136842383 136842430 -29807866 + T-rich Low_complexity Low_complexity 2 45 0 6 1629 22 35 0 0 chrX 136842674 136842703 -29807593 + AT_rich Low_complexity Low_complexity 1 29 0 6 1629 477 62 0 0 chrX 136843674 136843739 -29806557 + (GA)n Simple_repeat Simple_repeat 1 65 0 6 1629 638 278 0 0 chrX 136844171 136844315 -29805981 - ID_B1 SINE B4 -11 213 70 6 1629 405 0 0 0 chrX 136844363 136844408 -29805888 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1629 185 166 0 0 chrX 136844923 136844958 -29805338 - MIR SINE MIR -116 152 118 6 1629 387 60 0 0 chrX 136845203 136845253 -29805043 + (GAAA)n Simple_repeat Simple_repeat 3 52 0 6 1629 264 312 0 15 chrX 136845536 136845601 -29804695 - MER91A DNA Tip100 -85 111 48 6 1629 191 183 0 48 chrX 136846394 136846457 -29803839 + CT-rich Low_complexity Low_complexity 2 61 0 6 1629 571 223 77 0 chrX 136846997 136847127 -29803169 + B1_Mur4 SINE Alu 11 150 0 6 1629 261 57 0 0 chrX 136847139 136847174 -29803122 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 6 1629 843 180 196 6 chrX 136847693 136847872 -29802424 + B3 SINE B2 4 216 0 6 1629 25 0 0 0 chrX 136847872 136847897 -29802399 + AT_rich Low_complexity Low_complexity 1 25 0 6 1629 244 312 0 0 chrX 136847957 136848021 -29802275 + ID4_ SINE ID 20 83 0 6 1629 839 224 172 20 chrX 136848071 136848321 -29801975 + Lx8 LINE L1 7056 7343 -130 6 1629 310 267 0 49 chrX 136848669 136848791 -29801505 + Lx8 LINE L1 7358 7473 0 6 1629 468 312 13 13 chrX 136848860 136849016 -29801280 + RSINE1 SINE B4 4 159 -6 6 1629 1257 179 31 66 chrX 136850005 136850263 -29800033 + MT2A LTR ERVL 1 409 -192 6 1629 369 317 0 99 chrX 136850615 136850797 -29799499 + MER5B DNA MER1_type 4 167 -11 6 1629 369 351 35 6 chrX 136850920 136851089 -29799207 - LTR85a LTR Gypsy? -328 374 201 6 1629 273 209 0 0 chrX 136851100 136851167 -29799129 + CT-rich Low_complexity Low_complexity 1 67 0 6 1629 591 254 21 0 chrX 136852054 136852196 -29798100 - B1F SINE Alu 0 149 5 6 1629 223 336 70 31 chrX 136852207 136852336 -29797960 - MIRb SINE MIR -118 150 17 6 1629 401 220 80 0 chrX 136853228 136853328 -29796968 + MER103 DNA DNA 12 119 -47 6 1629 514 289 0 7 chrX 136853350 136853503 -29796793 + MER5A1 DNA MER1_type 13 164 -2 6 1629 180 0 0 0 chrX 136854212 136854232 -29796064 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 6 1629 2208 97 51 0 chrX 136854923 136855234 -29795062 - ORR1A2 LTR MaLR 0 327 1 7 1629 11497 119 56 24 chrX 136855234 136856178 -29794118 - ORR1A2-int LTR MaLR 0 1963 1034 7 1629 1225 48 0 0 chrX 136856178 136856325 -29793971 - B1_Mm SINE Alu 0 147 1 7 1629 11497 119 56 24 chrX 136856325 136857282 -29793014 - ORR1A2-int LTR MaLR -930 1033 1 7 1629 2266 72 23 75 chrX 136857282 136857627 -29792669 - ORR1A2 LTR MaLR 0 327 1 7 1629 296 340 80 28 chrX 136857746 136857958 -29792338 - MIRb SINE MIR -20 248 26 7 1629 734 287 36 62 chrX 136858231 136858588 -29791708 + L2a LINE L2 3079 3426 0 7 1629 430 262 48 0 chrX 136858857 136858960 -29791336 - PB1D10 SINE Alu -1 116 9 7 1629 500 284 31 31 chrX 136859090 136859286 -29791010 + MIR SINE MIR 46 241 -21 7 1629 433 246 175 0 chrX 136859467 136859581 -29790715 + B1F1 SINE Alu 2 135 -14 7 1629 16943 130 130 7 chrX 136859749 136861747 -29788549 - Lx LINE L1 0 6654 4644 7 1629 195 100 0 0 chrX 136861747 136861777 -29788519 + (TTG)n Simple_repeat Simple_repeat 2 31 0 7 1629 16943 139 211 6 chrX 136861777 136865001 -29785295 - Lx LINE L1 -1243 4643 422 7 1629 1029 238 5 9 chrX 136867436 136867648 -29782648 + B3 SINE B2 1 211 -5 7 1629 21 36 0 0 chrX 136867648 136867676 -29782620 + AT_rich Low_complexity Low_complexity 1 28 0 7 1629 570 219 29 0 chrX 136867686 136867823 -29782473 + B1F SINE Alu 1 141 -8 7 1629 552 68 0 0 chrX 136867823 136867896 -29782400 + (TC)n Simple_repeat Simple_repeat 2 74 0 7 1629 221 0 35 0 chrX 136867908 136867937 -29782359 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 1629 238 224 36 84 chrX 136867941 136868024 -29782272 - L2c LINE L2 -38 3349 3271 7 1629 405 0 0 0 chrX 136868312 136868357 -29781939 + (TA)n Simple_repeat Simple_repeat 1 45 0 7 1629 255 297 58 136 chrX 136868908 136869032 -29781264 - Charlie8 DNA MER1_type -2165 263 145 7 1629 1545 138 76 4 chrX 136869032 136869309 -29780987 - Lx4A LINE L1 -2 7056 6760 7 1629 255 297 58 136 chrX 136869309 136869375 -29780921 - Charlie8 DNA MER1_type -2284 144 88 7 1629 369 0 0 0 chrX 136869408 136869449 -29780847 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 1629 252 0 0 0 chrX 136869449 136869476 -29780820 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 1629 518 252 18 0 chrX 136869488 136869599 -29780697 - RSINE1 SINE B4 -50 115 3 7 1629 772 242 0 32 chrX 136869633 136869821 -29780475 + B3 SINE B2 1 182 -34 7 1629 258 241 48 111 chrX 136869863 136869989 -29780307 + Lx7 LINE L1 7578 7695 -1 7 1629 340 264 138 31 chrX 136870044 136870204 -29780092 + MIRb SINE MIR 84 260 -8 7 1629 281 319 8 25 chrX 136870574 136870696 -29779600 + CT-rich Low_complexity Low_complexity 1 120 0 7 1629 273 238 24 36 chrX 136870717 136870800 -29779496 - MER5B DNA MER1_type -3 175 94 7 1629 573 55 0 0 chrX 136870956 136871029 -29779267 + (CA)n Simple_repeat Simple_repeat 2 74 0 7 1629 809 115 0 15 chrX 136871778 136871910 -29778386 + URR1B DNA MER1_type 90 219 -6 7 1629 836 161 0 31 chrX 136872087 136872247 -29778049 + URR1B DNA MER1_type 1 155 -70 7 1629 189 0 0 0 chrX 136872385 136872406 -29777890 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 7 1629 505 130 11 0 chrX 136872627 136872719 -29777577 + URR1B DNA MER1_type 132 224 -1 7 1629 305 346 51 32 chrX 136872983 136873141 -29777155 - MIR3 SINE MIR -29 179 19 7 1629 1023 260 19 71 chrX 136874246 136874610 -29775686 + MER2 DNA MER2_type 1 345 0 7 1629 551 336 21 8 chrX 136875161 136875401 -29774895 - MIRc SINE MIR -8 260 18 7 1629 207 224 41 0 chrX 136875442 136875491 -29774805 + MIRm SINE MIR 217 267 -9 7 1629 379 303 8 16 chrX 136875533 136875657 -29774639 - PB1 SINE Alu -4 123 1 7 1629 24 0 0 0 chrX 136876257 136876281 -29774015 + GC_rich Low_complexity Low_complexity 1 24 0 7 1629 471 18 0 0 chrX 136876281 136876337 -29773959 + (GA)n Simple_repeat Simple_repeat 1 56 0 7 1629 199 261 100 14 chrX 136876521 136876591 -29773705 + MIRb SINE MIR 192 267 -1 7 1629 690 274 40 25 chrX 136877939 136878141 -29772155 - MIRb SINE MIR -8 260 56 7 1629 633 61 0 0 chrX 136878904 136878986 -29771310 + (TA)n Simple_repeat Simple_repeat 2 83 0 7 1629 222 288 108 39 chrX 136879705 136879835 -29770461 + L2b LINE L2 3177 3315 -72 7 1629 6931 194 124 32 chrX 136880140 136881263 -29769033 - Lx7 LINE L1 0 7696 6412 7 1629 1229 47 0 0 chrX 136881263 136881411 -29768885 + B1_Mus1 SINE Alu 1 148 0 7 1629 6931 194 124 32 chrX 136881411 136881893 -29768403 - Lx7 LINE L1 -1285 6411 5943 7 1629 2101 102 72 3 chrX 136884707 136885012 -29765284 - ORR1A3 LTR MaLR 0 326 1 7 1629 247 306 36 18 chrX 136885322 136885432 -29764864 - L2a LINE L2 -268 3158 3047 7 1629 323 329 33 0 chrX 136885848 136886000 -29764296 - L2a LINE L2 -267 3159 3003 7 1629 919 324 104 49 chrX 136886107 136887121 -29763175 - L2a LINE L2 -556 2863 1795 7 1629 291 121 0 0 chrX 136887641 136887699 -29762597 + (GA)n Simple_repeat Simple_repeat 1 58 0 7 1629 232 273 0 93 chrX 136887914 136888011 -29762285 + L1M2 LINE L1 5552 5639 -652 7 1629 1008 213 74 16 chrX 136888442 136888685 -29761611 + L1MB3 LINE L1 5638 5894 -289 7 1629 629 200 0 27 chrX 136888689 136888838 -29761458 + L1MB3 LINE L1 6032 6176 -7 7 1629 364 269 42 14 chrX 136889454 136889597 -29760699 - L2a LINE L2 -2913 506 360 7 1629 360 283 0 9 chrX 136889635 136889742 -29760554 + Tigger7 DNA MER2_type 1 106 -2385 7 1629 1389 189 108 29 chrX 136889775 136890118 -29760178 - ORR1D1 LTR MaLR -4 370 1 7 1629 229 261 123 57 chrX 136890147 136890269 -29760027 - ID_B1 SINE B4 -1 223 94 7 1629 1248 63 101 22 chrX 136890290 136890468 -29759828 - B2_Mm1t SINE B2 -1 192 1 7 1629 575 206 28 66 chrX 136890468 136890639 -29759657 + Tigger7 DNA MER2_type 2318 2481 -10 7 1629 283 353 39 19 chrX 136890826 136890982 -29759314 + MIRb SINE MIR 49 207 -61 7 1629 5240 44 12 0 chrX 136891027 136891666 -29758630 - L1Md_F3 LINE L1 -1 6583 5937 7 1629 346 260 108 16 chrX 136891946 136892075 -29758221 - ID_B1 SINE B4 0 224 84 7 1629 296 303 40 0 chrX 136892220 136892319 -29757977 + MER5A1 DNA MER1_type 61 163 -3 7 1629 180 0 0 0 chrX 136897036 136897056 -29753240 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 7 1629 232 241 75 75 chrX 136897115 136897209 -29753087 - L2c LINE L2 0 3387 3294 7 1629 601 225 0 32 chrX 136897213 136897337 -29752959 + RSINE1 SINE B4 2 121 -44 7 1629 432 0 0 0 chrX 136897341 136897389 -29752907 + (GA)n Simple_repeat Simple_repeat 1 48 0 7 1629 224 286 32 42 chrX 136897559 136897654 -29752642 - MIRb SINE MIR -71 197 104 7 1629 409 250 74 16 chrX 136898332 136898454 -29751842 - B1F1 SINE Alu -1 148 20 7 1629 353 282 33 72 chrX 136898634 136898787 -29751509 - B1_Mus1 SINE Alu -1 147 1 7 1629 508 293 0 22 chrX 136898652 136898788 -29751508 - ID_B1 SINE B4 -11 213 81 7 1629 354 290 72 28 chrX 136898794 136898975 -29751321 - MIR SINE MIR -43 219 31 7 1629 475 228 39 16 chrX 136899251 136899380 -29750916 - B1F1 SINE Alu -15 134 3 7 1629 198 0 0 0 chrX 136899397 136899419 -29750877 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 7 1629 276 30 0 0 chrX 136899541 136899574 -29750722 + (GA)n Simple_repeat Simple_repeat 2 34 0 7 1629 421 17 35 0 chrX 136900743 136900801 -29749495 + (GA)n Simple_repeat Simple_repeat 1 60 0 7 1629 216 0 0 0 chrX 136900954 136900978 -29749318 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 1629 557 28 14 0 chrX 136901093 136901164 -29749132 + (TC)n Simple_repeat Simple_repeat 1 72 0 7 1629 489 328 189 29 chrX 136901710 136902239 -29748057 - L2a LINE L2 0 3426 2814 7 1629 294 29 0 0 chrX 136902316 136902351 -29747945 + (ATTG)n Simple_repeat Simple_repeat 3 37 0 7 1629 558 236 0 0 chrX 136902465 136902571 -29747725 - PB1D10 SINE Alu -10 107 2 7 1629 296 274 0 170 chrX 136903699 136903840 -29746456 - ID_B1 SINE B4 -85 139 23 7 1629 263 282 28 0 chrX 136903780 136903851 -29746445 - ID4 SINE ID -2 81 9 7 1629 303 211 18 0 chrX 136903996 136904053 -29746243 + B1_Mur1 SINE Alu 72 129 -20 7 1629 211 279 0 16 chrX 136904628 136904690 -29745606 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1629 469 248 83 0 chrX 136904943 136905064 -29745232 + ID_B1 SINE B4 82 212 -12 7 1629 189 239 43 0 chrX 136905111 136905157 -29745139 + L2a LINE L2 3118 3165 -261 7 1629 759 163 0 81 chrX 136905166 136905326 -29744970 - B1_Mus2 SINE Alu 0 147 1 7 1629 1524 68 5 0 chrX 136905339 136905529 -29744767 - B2_Mm1a SINE B2 -1 192 2 7 1629 379 261 21 14 chrX 136905621 136905765 -29744531 - L1MC4a LINE L1 0 7882 7738 7 1629 957 197 136 33 chrX 136905845 136906214 -29744082 - MT2A LTR ERVL 0 533 1 7 1629 1969 238 68 37 chrX 136906296 136906868 -29743428 - L1MD2 LINE L1 -227 6132 5543 7 1629 331 329 54 20 chrX 136906879 136907028 -29743268 + L2a LINE L2 3272 3425 -1 7 1629 210 254 0 100 chrX 136907415 136907485 -29742811 - L2a LINE L2 -62 3364 3302 7 1629 483 318 33 26 chrX 136907842 136907994 -29742302 - MER82 DNA MER2_type -57 596 444 7 1629 369 306 73 0 chrX 136908009 136908133 -29742163 + B1F1 SINE Alu 1 133 -16 7 1629 221 388 37 21 chrX 136908195 136908382 -29741914 + MIRb SINE MIR 12 201 -67 7 1629 1074 57 50 0 chrX 136908391 136908531 -29741765 + B1_Mus2 SINE Alu 1 147 0 7 1629 192 147 0 0 chrX 136908921 136908955 -29741341 + MIR3 SINE MIR 151 184 -24 7 1629 378 356 20 20 chrX 136909000 136909152 -29741144 + MER5B DNA MER1_type 2 153 -25 7 1629 209 140 0 23 chrX 136909867 136909911 -29740385 + T-rich Low_complexity Low_complexity 2 44 0 7 1629 434 249 0 26 chrX 136909915 136910041 -29740255 - B1F1 SINE Alu 0 120 1 7 1629 584 196 150 0 chrX 136910608 136910781 -29739515 + L1MA6 LINE L1 6045 6243 -57 7 1629 581 89 0 29 chrX 136910783 136910887 -29739409 - RMER19A LTR ERVK -636 101 1 7 1629 216 263 19 66 chrX 136911471 136911577 -29738719 - MER5B DNA MER1_type -52 126 26 7 1629 317 262 176 55 chrX 136911642 136911824 -29738472 - MER58A DNA MER1_type -19 205 2 7 1629 1085 71 0 0 chrX 136912060 136912215 -29738081 - RMER19A LTR ERVK -582 155 1 7 1629 2123 133 77 19 chrX 136912372 136912748 -29737548 - Lx2 LINE L1 0 6997 6600 7 1629 361 289 49 98 chrX 136913805 136913882 -29736414 - MER5B DNA MER1_type -3 175 98 8 1629 360 0 0 0 chrX 136913882 136913922 -29736374 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 1629 361 289 49 98 chrX 136913922 136914028 -29736268 - MER5B DNA MER1_type -81 97 1 8 1629 532 343 143 21 chrX 136914428 136914860 -29735436 + L2 LINE L2 2575 3059 -360 8 1629 387 0 0 0 chrX 136914971 136915014 -29735282 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 1629 1125 243 33 133 chrX 136915037 136915483 -29734813 + L1MA6 LINE L1 5643 6044 -256 8 1629 1437 81 16 0 chrX 136915483 136915668 -29734628 - B2_Mm2 SINE B2 -7 188 1 8 1629 1125 243 33 133 chrX 136915668 136915771 -29734525 + L1MA6 LINE L1 6045 6137 -163 8 1629 258 81 0 0 chrX 136915893 136915930 -29734366 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 1629 249 108 0 0 chrX 136915921 136915958 -29734338 + (TA)n Simple_repeat Simple_repeat 1 37 0 8 1629 316 192 67 0 chrX 136915997 136916101 -29734195 - Tigger7 DNA MER2_type -79 2412 2302 8 1629 549 205 33 0 chrX 136916118 136916240 -29734056 + B1_Mur3 SINE Alu 18 143 -6 8 1629 1140 63 0 0 chrX 136916249 136916391 -29733905 + B1_Mus1 SINE Alu 1 142 -6 8 1629 207 0 0 0 chrX 136916394 136916417 -29733879 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 1629 368 40 0 20 chrX 136916427 136916478 -29733818 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 8 1629 259 77 26 0 chrX 136916478 136916517 -29733779 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 8 1629 25 31 0 0 chrX 136916531 136916563 -29733733 + AT_rich Low_complexity Low_complexity 1 32 0 8 1629 619 215 66 7 chrX 136916636 136916772 -29733524 + ID_B1 SINE B4 81 224 0 8 1629 953 103 76 13 chrX 136916843 136917001 -29733295 + B2_Mm2 SINE B2 2 169 -26 8 1629 532 244 0 9 chrX 136917024 136917140 -29733156 + PB1D10 SINE Alu 1 115 -2 8 1629 1097 259 23 55 chrX 136917368 136917715 -29732581 - MER2 DNA MER2_type -9 336 1 8 1629 189 0 0 0 chrX 136917878 136917899 -29732397 + (TC)n Simple_repeat Simple_repeat 2 22 0 8 1629 495 179 37 19 chrX 136918352 136918460 -29731836 - PB1D7 SINE Alu -1 119 10 8 1629 289 216 248 41 chrX 136918460 136918473 -29731823 - ID_B1 SINE B4 -1 223 78 8 1629 219 261 0 0 chrX 136920084 136920130 -29730166 + CT-rich Low_complexity Low_complexity 1 46 0 8 1629 288 77 0 0 chrX 136920940 136920979 -29729317 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 8 1629 494 272 69 4 chrX 136920979 136921110 -29729186 - B1_Mur2 SINE Alu -12 137 1 8 1629 203 266 0 16 chrX 136921317 136921398 -29728898 - L2c LINE L2 -1 3425 3342 8 1629 288 320 19 37 chrX 136921535 136921642 -29728654 + PB1D10 SINE Alu 11 115 -2 8 1629 1056 116 7 0 chrX 136921656 136921803 -29728493 + B1_Mur4 SINE Alu 2 149 -1 8 1629 485 16 0 16 chrX 136921818 136921881 -29728415 + (GA)n Simple_repeat Simple_repeat 1 62 0 8 1629 180 308 225 0 chrX 136921889 136922009 -29728287 - L2c LINE L2 -168 3219 3073 8 1629 242 262 12 59 chrX 136922152 136922237 -29728059 + MER20B DNA MER1_type 2 82 -701 8 1629 225 0 0 0 chrX 136922237 136922262 -29728034 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 1629 697 224 35 0 chrX 136922417 136922560 -29727736 + B1_Mur2 SINE Alu 1 148 -1 8 1629 231 324 42 0 chrX 136922580 136922651 -29727645 + ID4_ SINE ID 1 74 -9 8 1629 272 304 33 0 chrX 136923972 136924064 -29726232 + B1F1 SINE Alu 4 98 -51 8 1629 262 314 36 10 chrX 136924248 136924345 -29725951 + MER20B DNA MER1_type 91 193 -26 8 1629 540 182 13 26 chrX 136926103 136926255 -29724041 + (TATG)n Simple_repeat Simple_repeat 4 153 0 8 1629 1117 56 0 7 chrX 136926781 136926917 -29723379 + B1_Mm SINE Alu 1 136 -11 8 1629 213 65 0 0 chrX 136926917 136926948 -29723348 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 1629 714 245 60 33 chrX 136927066 136927281 -29723015 + ID_B1 SINE B4 3 223 -1 8 1629 243 252 34 25 chrX 136927454 136927572 -29722724 - L1MC5 LINE L1 -44 7917 7799 8 1629 227 258 197 0 chrX 136927743 136927809 -29722487 - B1F SINE Alu -62 87 9 8 1629 549 269 28 0 chrX 136927870 136928015 -29722281 + B1_Mur1 SINE Alu 1 149 0 8 1629 226 304 14 0 chrX 136928088 136928157 -29722139 - Tigger7 DNA MER2_type -2411 80 11 8 1629 204 125 0 0 chrX 136929076 136929108 -29721188 + (A)n Simple_repeat Simple_repeat 1 32 0 8 1629 395 224 35 0 chrX 136929237 136929322 -29720974 + MER5A DNA MER1_type 1 88 -101 8 1629 276 301 140 9 chrX 136929375 136929489 -29720807 - ID_B1 SINE B4 -13 211 83 8 1629 245 100 0 24 chrX 136929551 136929592 -29720704 + MER5B DNA MER1_type 1 40 -138 8 1629 621 219 32 8 chrX 136929595 136929719 -29720577 + B3 SINE B2 1 127 -89 8 1629 1739 253 131 18 chrX 136930356 136930926 -29719370 - L1ME1 LINE L1 -1 6163 5479 8 1629 1260 114 11 0 chrX 136930926 136931102 -29719194 - B2_Mm1t SINE B2 -14 179 2 8 1629 1866 269 119 23 chrX 136931102 136931528 -29718768 - L1ME1 LINE L1 -701 5478 5014 8 1629 558 41 0 0 chrX 136931528 136931601 -29718695 + (TG)n Simple_repeat Simple_repeat 2 74 0 8 1629 1866 289 117 26 chrX 136931601 136932195 -29718101 - L1ME1 LINE L1 -1133 5013 4356 8 1629 535 246 49 35 chrX 136932195 136932338 -29717958 - B1F1 SINE Alu -3 146 2 8 1629 1866 289 117 26 chrX 136932338 136932477 -29717819 - L1ME1 LINE L1 -1791 4355 4215 8 1629 433 254 100 0 chrX 136932499 136932629 -29717667 - B1F SINE Alu -6 143 1 8 1629 407 78 16 0 chrX 136932638 136932702 -29717594 + (TG)n Simple_repeat Simple_repeat 2 66 0 8 1629 784 30 0 0 chrX 136935719 136935819 -29714477 - B1_Mm SINE Alu 0 147 48 8 1629 292 183 16 32 chrX 136935764 136935826 -29714470 - MT2B LTR ERVL -344 257 197 8 1629 388 159 165 6 chrX 136935832 136935996 -29714300 - RMER17C LTR ERVK -133 277 88 8 1629 1107 73 0 0 chrX 136935997 136936134 -29714162 + B1_Mus2 SINE Alu 1 137 -10 8 1629 1207 251 29 29 chrX 136936704 136936924 -29713372 + MER2 DNA MER2_type 1 221 -124 8 1629 403 266 34 50 chrX 136936924 136937043 -29713253 + PB1D10 SINE Alu 1 117 0 8 1629 1207 251 29 29 chrX 136937043 136937166 -29713130 + MER2 DNA MER2_type 222 344 -1 8 1629 894 281 45 42 chrX 136937226 136937560 -29712736 - MER58B DNA MER1_type -6 335 1 8 1629 3304 43 5 5 chrX 136938188 136938582 -29711714 - MTA_Mm LTR MaLR -2 394 1 8 1629 1734 170 47 44 chrX 136939384 136939747 -29710549 - ORR1D1 LTR MaLR -9 365 2 8 1629 245 260 35 88 chrX 136939962 136940076 -29710220 + PB1D10 SINE Alu 1 108 -9 8 1629 884 202 226 8 chrX 136940102 136940341 -29709955 - B4A SINE B4 0 292 2 8 1629 322 262 0 0 chrX 136940343 136940423 -29709873 + ID4 SINE ID 1 80 -3 8 1629 201 121 0 0 chrX 136941562 136941595 -29708701 + (A)n Simple_repeat Simple_repeat 1 33 0 8 1629 745 163 29 29 chrX 136941595 136941734 -29708562 - B1_Mur4 SINE Alu -9 141 3 8 1629 186 43 0 0 chrX 136942064 136942087 -29708209 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 1629 189 276 62 17 chrX 136942199 136942295 -29708001 - L2c LINE L2 -237 3150 3045 8 1629 197 363 7 52 chrX 136942343 136942497 -29707799 - L2c LINE L2 -452 2967 2821 8 1629 1214 281 68 43 chrX 136942966 136943453 -29706843 + MLT1D LTR MaLR 6 504 -1 8 1629 711 243 39 87 chrX 136943517 136943747 -29706549 - ID_B1 SINE B4 -2 222 4 8 1629 1053 107 0 138 chrX 136943963 136944159 -29706137 + B2_Mm2 SINE B2 1 169 -26 8 1629 240 61 0 0 chrX 136944191 136944224 -29706072 + B2_Mm2 SINE B2 47 79 -116 8 1629 384 283 0 54 chrX 136944333 136944445 -29705851 + PB1D10 SINE Alu 7 112 -5 8 1629 561 262 18 36 chrX 136944453 136944619 -29705677 + RSINE1 SINE B4 3 165 0 8 1629 494 196 148 9 chrX 136944872 136944980 -29705316 - ID_B1 SINE B4 -4 220 98 8 1629 316 248 24 142 chrX 136944873 136945000 -29705296 - PB1D10 SINE Alu -5 112 1 8 1629 280 329 80 25 chrX 136945000 136945146 -29705150 + MER5B DNA MER1_type 23 177 -1 8 1629 901 132 48 48 chrX 136945883 136946050 -29704246 - B2_Mm2 SINE B2 -28 167 1 8 1629 202 246 30 90 chrX 136946227 136946294 -29704002 - L2 LINE L2 -623 2796 2734 8 1629 390 91 0 0 chrX 136946344 136946399 -29703897 + (GA)n Simple_repeat Simple_repeat 2 56 0 8 1629 1392 56 0 0 chrX 136946399 136946577 -29703719 + (GAA)n Simple_repeat Simple_repeat 2 179 0 8 1629 267 103 0 0 chrX 136946577 136946616 -29703680 + (GGA)n Simple_repeat Simple_repeat 1 39 0 8 1629 210 328 37 111 chrX 136946698 136946968 -29703328 + L2a LINE L2 3103 3349 -77 8 1629 1269 41 0 0 chrX 136947116 136947263 -29703033 + B1_Mus2 SINE Alu 1 147 0 8 1629 198 0 0 0 chrX 136947263 136947285 -29703011 + (A)n Simple_repeat Simple_repeat 1 22 0 8 1629 5167 201 77 25 chrX 136948007 136948147 -29702149 - Lx4B LINE L1 -88 6912 6746 8 1629 180 0 0 0 chrX 136948147 136948167 -29702129 + (G)n Simple_repeat Simple_repeat 1 20 0 8 1629 5167 130 62 21 chrX 136948167 136949061 -29701235 - Lx4B LINE L1 -310 6748 5823 8 1629 404 269 51 25 chrX 136949278 136949396 -29700900 + B1F SINE Alu 24 144 -5 8 1629 643 256 66 71 chrX 136949601 136949799 -29700497 + B3A SINE B2 2 198 0 8 1629 356 288 0 0 chrX 136949911 136949984 -29700312 + PB1D10 SINE Alu 37 109 -8 8 1629 581 198 0 28 chrX 136950021 136950130 -29700166 + PB1D10 SINE Alu 12 117 0 8 1629 297 274 62 89 chrX 136950161 136950273 -29700023 + MER58A DNA MER1_type 11 119 -105 8 1629 334 274 78 10 chrX 136950377 136950480 -29699816 + PB1D10 SINE Alu 5 114 -3 8 1629 993 227 5 5 chrX 136950488 136950696 -29699600 + B3 SINE B2 3 210 -6 8 1629 422 247 0 0 chrX 136950989 136951066 -29699230 - ID4 SINE ID 0 83 7 8 1629 289 296 12 0 chrX 136951068 136951149 -29699147 - ID_B1 SINE B4 -9 215 134 8 1629 795 78 0 0 chrX 136951459 136951561 -29698735 + B2_Mm2 SINE B2 1 102 -93 8 1629 1180 58 0 0 chrX 136951585 136951723 -29698573 + B1_Mm SINE Alu 1 138 -9 8 1629 198 118 0 0 chrX 136951734 136951768 -29698528 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 8 1629 665 214 0 48 chrX 136952043 136952190 -29698106 + B1_Mus1 SINE Alu 3 142 -6 8 1629 638 215 66 0 chrX 136952249 136952370 -29697926 + B2_Mm2 SINE B2 1 129 -66 9 1629 282 29 0 0 chrX 136952403 136952438 -29697858 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 1629 234 0 0 0 chrX 136952438 136952463 -29697833 + (CATA)n Simple_repeat Simple_repeat 3 28 0 9 1629 217 323 32 0 chrX 136952484 136952546 -29697750 + ID_B1 SINE B4 78 141 -83 9 1629 301 376 50 0 chrX 136952491 136952592 -29697704 + PB1D7 SINE Alu 6 111 -9 9 1629 1021 195 163 5 chrX 136952628 136952872 -29697424 + Lx5 LINE L1 6819 7047 -3 9 1629 268 277 116 11 chrX 136953991 136954086 -29696210 + B1F SINE Alu 8 112 -37 9 1629 297 287 0 105 chrX 136956010 136956115 -29694181 + PB1D10 SINE Alu 1 94 -23 9 1629 321 155 0 0 chrX 136956221 136956279 -29694017 + (TA)n Simple_repeat Simple_repeat 2 59 0 9 1629 196 316 118 87 chrX 136956471 136956609 -29693687 - L2a LINE L2 -1 3425 3261 9 1629 459 132 0 0 chrX 136956683 136956774 -29693522 + (CA)n Simple_repeat Simple_repeat 2 92 0 9 1629 314 339 57 72 chrX 136956903 136957025 -29693271 - Tigger14a DNA MER2_type -4 320 204 9 1629 507 276 0 0 chrX 136957025 136957130 -29693166 + PB1D10 SINE Alu 1 105 -12 9 1629 314 339 57 72 chrX 136957130 136957271 -29693025 - Tigger14a DNA MER2_type -121 203 61 9 1629 1237 266 112 14 chrX 136957273 136957780 -29692516 - L1MB8 LINE L1 -320 5858 5302 9 1629 1270 253 44 29 chrX 136957781 136958232 -29692064 - L1MB8 LINE L1 -1300 4846 4389 9 1629 351 223 99 86 chrX 136958303 136958455 -29691841 + MT2B LTR ERVL 119 272 -329 9 1629 703 248 0 0 chrX 136958343 136958480 -29691816 + B1_Mur1 SINE Alu 8 144 -5 9 1629 522 290 14 28 chrX 136958592 136958734 -29691562 + ID_B1 SINE B4 81 220 -4 9 1629 682 238 14 7 chrX 136958918 136959062 -29691234 + B1_Mur2 SINE Alu 2 146 -3 9 1629 542 233 14 95 chrX 136959090 136959237 -29691059 - ID_B1 SINE B4 -9 215 81 9 1629 1482 49 38 0 chrX 136959262 136959446 -29690850 - B2_Mm2 SINE B2 -4 191 1 9 1629 294 273 62 38 chrX 136959460 136959540 -29690756 - ID4 SINE ID 0 83 2 9 1629 359 206 14 56 chrX 136959540 136959612 -29690684 - L1MB8 LINE L1 -2337 3809 3756 9 1629 1556 52 0 15 chrX 136959612 136959807 -29690489 - B2_Mm2 SINE B2 -1 194 3 9 1629 359 274 135 32 chrX 136959807 136959938 -29690358 - L1MB8 LINE L1 -2391 3755 3606 9 1629 240 258 39 136 chrX 136959943 136959956 -29690340 - PB1D7 SINE Alu 0 120 109 9 1629 225 0 0 0 chrX 136959956 136959981 -29690315 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 9 1629 240 258 39 136 chrX 136959981 136959992 -29690304 - PB1D7 SINE Alu -12 108 98 9 1629 1187 56 21 0 chrX 136959992 136960136 -29690160 + B1_Mus1 SINE Alu 2 148 0 9 1629 189 0 0 0 chrX 136960138 136960159 -29690137 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 9 1629 265 251 50 83 chrX 136960159 136960246 -29690050 - B1F SINE Alu -23 97 16 9 1629 350 276 79 24 chrX 136960197 136960323 -29689973 + B1F SINE Alu 8 140 -9 9 1629 463 267 0 0 chrX 136960228 136960329 -29689967 + ID_B1 SINE B4 121 221 -3 9 1629 461 346 7 0 chrX 136960342 136960478 -29689818 + B1F1 SINE Alu 1 137 -12 9 1629 236 284 48 10 chrX 136960481 136960584 -29689712 - L1MB8 LINE L1 -3585 2561 2455 9 1629 275 143 0 23 chrX 136960738 136960781 -29689515 + B1_Mus1 SINE Alu 2 43 -105 9 1629 236 284 66 99 chrX 136960782 136960903 -29689393 + MIRc SINE MIR 101 217 -51 9 1629 585 255 57 0 chrX 136960937 136961078 -29689218 - ID_B1 SINE B4 0 224 76 9 1629 426 269 56 0 chrX 136961534 136961642 -29688654 - B1F SINE Alu -1 148 35 9 1629 306 0 0 0 chrX 136963169 136963203 -29687093 + (CTATT)n Simple_repeat Simple_repeat 3 36 0 9 1629 777 119 74 74 chrX 136963429 136963592 -29686704 - B2_Mm2 SINE B2 -6 189 27 9 1629 245 29 29 0 chrX 136963623 136963657 -29686639 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 9 1629 1102 57 28 7 chrX 136963658 136963800 -29686496 - B1_Mus1 SINE Alu 0 148 4 9 1629 1625 37 11 0 chrX 136963817 136964008 -29686288 - B2_Mm1a SINE B2 0 193 1 9 1629 300 73 0 0 chrX 136964010 136964051 -29686245 - B2_Mm2 SINE B2 -154 41 1 9 1629 298 355 55 16 chrX 136964087 136964270 -29686026 + MIRb SINE MIR 78 267 -1 9 1629 414 0 0 0 chrX 136964677 136964723 -29685573 + (T)n Simple_repeat Simple_repeat 1 46 0 9 1629 360 94 0 0 chrX 136967986 136968039 -29682257 + (CAG)n Simple_repeat Simple_repeat 1 53 0 9 1629 205 162 0 0 chrX 136969016 136969053 -29681243 + G-rich Low_complexity Low_complexity 1 37 0 9 1629 288 325 0 0 chrX 136969265 136969342 -29680954 + (CCA)n Simple_repeat Simple_repeat 2 78 0 9 1629 28 29 0 0 chrX 136969906 136969941 -29680355 + AT_rich Low_complexity Low_complexity 1 35 0 9 1630 201 269 39 0 chrX 136971128 136971180 -29679116 + L2b LINE L2 3322 3375 0 9 1630 1332 102 38 0 chrX 136971217 136971403 -29678893 - B2_Mm2 SINE B2 -2 193 1 9 1630 431 227 11 54 chrX 136971503 136971596 -29678700 + ID_B1 SINE B4 3 91 -133 9 1630 831 253 0 17 chrX 136971598 136971775 -29678521 + B3A SINE B2 1 174 -24 9 1630 216 170 0 86 chrX 136971837 136971879 -29678417 + G-rich Low_complexity Low_complexity 1 38 0 9 1630 189 0 0 0 chrX 136971879 136971900 -29678396 + (CA)n Simple_repeat Simple_repeat 1 21 0 9 1630 216 170 0 86 chrX 136971900 136971915 -29678381 + G-rich Low_complexity Low_complexity 39 53 0 9 1630 473 250 63 49 chrX 136971945 136972088 -29678208 + ID_B1 SINE B4 80 224 0 9 1630 864 97 0 0 chrX 136972089 136972213 -29678083 + (GGGGA)n Simple_repeat Simple_repeat 4 127 0 9 1630 332 270 124 0 chrX 136972220 136972309 -29677987 + B1F SINE Alu 1 100 -49 9 1630 270 0 0 0 chrX 136973169 136973199 -29677097 + (CA)n Simple_repeat Simple_repeat 2 31 0 9 1630 450 0 0 0 chrX 136973336 136973386 -29676910 + (TTGG)n Simple_repeat Simple_repeat 2 51 0 9 1630 1121 43 65 0 chrX 136973390 136973529 -29676767 - B1_Mus1 SINE Alu 0 148 1 9 1630 286 298 0 50 chrX 136973529 136973628 -29676668 - MIRb SINE MIR -65 203 110 9 1630 428 222 22 45 chrX 136973628 136973807 -29676489 + RMER17C LTR ERVK 98 272 -138 9 1630 402 21 0 0 chrX 136973809 136973856 -29676440 + (GA)n Simple_repeat Simple_repeat 1 47 0 9 1630 246 294 43 29 chrX 136974500 136974518 -29675778 + B4 SINE B4 70 88 -204 9 1630 253 239 211 0 chrX 136974518 136974589 -29675707 + PB1D10 SINE Alu 1 86 -31 9 1630 1339 160 0 26 chrX 136975056 136975287 -29675009 - URR1B DNA MER1_type 0 225 1 9 1630 365 291 0 104 chrX 136975309 136975424 -29674872 - PB1D10 SINE Alu -8 109 7 9 1630 280 237 167 34 chrX 136975545 136975715 -29674581 + MIR SINE MIR 46 236 -32 9 1630 2351 121 0 3 chrX 136976183 136976532 -29673764 + Lx LINE L1 6306 6653 -1 9 1630 211 219 106 30 chrX 136976539 136976605 -29673691 + ID2 SINE ID 13 83 0 9 1630 327 270 65 82 chrX 136976651 136976818 -29673478 - B3A SINE B2 -11 182 1 9 1630 435 19 0 0 chrX 136976842 136976894 -29673402 + (TG)n Simple_repeat Simple_repeat 1 52 0 9 1630 288 305 0 0 chrX 136976951 136977010 -29673286 - RSINE1 SINE B4 -2 163 105 9 1630 1996 162 19 41 chrX 136977019 136977438 -29672858 - RMER17C LTR ERVK 0 410 1 9 1630 1257 288 26 42 chrX 136977510 136977798 -29672498 - L1MA9 LINE L1 -205 6107 5831 9 1630 2868 36 90 5 chrX 136977798 136978165 -29672131 - MTB LTR MaLR 0 400 3 9 1630 1257 288 26 42 chrX 136978165 136978376 -29671920 - L1MA9 LINE L1 -482 5830 5616 9 1630 543 49 0 12 chrX 136978430 136978513 -29671783 - L1Md_F2 LINE L1 0 6582 6501 9 1630 259 272 115 10 chrX 136978513 136978617 -29671679 - PB1D7 SINE Alu -1 119 5 9 1630 462 255 0 123 chrX 136979083 136979253 -29671043 - B1_Mur1 SINE Alu 0 149 1 9 1630 279 0 0 0 chrX 136979746 136979777 -29670519 + (TTG)n Simple_repeat Simple_repeat 3 33 0 9 1630 332 226 8 6 chrX 136979946 136980027 -29670269 - B3A SINE B2 -76 119 38 9 1630 21 36 0 0 chrX 136980034 136980062 -29670234 + AT_rich Low_complexity Low_complexity 1 28 0 9 1630 180 329 13 27 chrX 136981048 136981123 -29669173 + MIR SINE MIR 63 136 -72 9 1630 489 211 221 33 chrX 136981155 136981336 -29668960 - B3 SINE B2 -1 215 1 9 1630 1016 40 0 0 chrX 136981398 136981522 -29668774 + B1_Mus1 SINE Alu 25 148 0 9 1630 384 247 65 89 chrX 136981400 136981528 -29668768 + B4A SINE B4 111 236 -56 9 1630 231 36 0 0 chrX 136981528 136981556 -29668740 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 9 1630 384 247 65 89 chrX 136981556 136981596 -29668700 + B4A SINE B4 237 274 -18 9 1630 502 336 8 0 chrX 136981573 136981707 -29668589 - ID_B1 SINE B4 -78 146 12 9 1630 1061 103 0 0 chrX 136981795 136981940 -29668356 + B2_Mm2 SINE B2 3 147 -48 9 1630 1329 82 50 0 chrX 136981972 136982154 -29668142 + B2_Mm2 SINE B2 2 192 -3 9 1630 210 71 0 0 chrX 136982287 136982315 -29667981 + (A)n Simple_repeat Simple_repeat 1 28 0 9 1630 1409 66 44 0 chrX 136982316 136982499 -29667797 - B2_Mm1a SINE B2 -2 191 1 9 1630 671 151 42 8 chrX 136982507 136982607 -29667689 - B1_Mur4 SINE Alu -5 145 42 9 1630 271 350 70 0 chrX 136982607 136982707 -29667589 + PB1D10 SINE Alu 3 109 -8 9 1630 523 246 48 32 chrX 136982773 136982899 -29667397 - B1F SINE Alu -3 146 19 9 1630 254 257 43 95 chrX 136982797 136982913 -29667383 - MT2B LTR ERVL -323 278 169 9 1630 806 244 83 0 chrX 136982947 136983152 -29667144 + ID_B1 SINE B4 1 222 -2 9 1630 318 50 0 0 chrX 136983277 136983317 -29666979 + (TATG)n Simple_repeat Simple_repeat 2 41 0 9 1630 621 243 7 35 chrX 136983320 136983461 -29666835 - B1_Mur1 SINE Alu -11 138 2 9 1630 324 0 0 0 chrX 136983693 136983729 -29666567 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 1630 651 203 15 0 chrX 136984032 136984165 -29666131 - Lx7 LINE L1 -30 7666 7532 9 1630 889 258 14 0 chrX 136984165 136984374 -29665922 + Lx7 LINE L1 7125 7336 -360 9 1630 813 206 7 7 chrX 136984451 136984598 -29665698 - B1_Mur2 SINE Alu -2 147 1 9 1630 293 253 215 65 chrX 136984875 136985061 -29665235 - ID_B1 SINE B4 -7 217 4 9 1630 333 362 71 78 chrX 136985273 136985567 -29664729 - B4A SINE B4 0 292 1 1 1630 282 197 96 27 chrX 136985594 136985667 -29664629 - ID4 SINE ID -4 79 2 1 1630 276 30 0 0 chrX 136985710 136985743 -29664553 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1630 263 294 139 52 chrX 136985743 136985847 -29664449 - PB1 SINE Alu -12 115 1 1 1630 373 231 52 52 chrX 136985752 136985848 -29664448 - ID_B1 SINE B4 -48 176 81 1 1630 626 222 37 90 chrX 136985925 136986113 -29664183 + B3A SINE B2 8 185 -13 1 1630 587 280 16 0 chrX 136986161 136986286 -29664010 + B1_Mur1 SINE Alu 3 129 -20 1 1630 222 62 0 0 chrX 136986794 136986826 -29663470 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 1630 411 268 44 9 chrX 136986826 136986931 -29663365 - PB1D9 SINE Alu -9 111 3 1 1630 938 101 36 7 chrX 136987140 136987280 -29663016 - B1_Mur4 SINE Alu -1 149 6 1 1630 1409 87 16 11 chrX 136987287 136987473 -29662823 - B2_Mm2 SINE B2 -8 187 1 1 1630 27 0 0 0 chrX 136987473 136987500 -29662796 + AT_rich Low_complexity Low_complexity 1 27 0 1 1630 586 271 84 6 chrX 136987500 136987667 -29662629 + B3A SINE B2 1 180 -18 1 1630 285 294 119 76 chrX 136987683 136987753 -29662543 - RSINE1 SINE B4 -37 128 54 1 1630 3251 86 192 14 chrX 136987753 136988248 -29662048 - MT2B2 LTR ERVL 0 584 2 1 1630 285 294 119 76 chrX 136988248 136988295 -29662001 - RSINE1 SINE B4 -112 53 7 1 1630 222 118 0 0 chrX 136988298 136988332 -29661964 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1630 705 109 0 0 chrX 136988374 136988475 -29661821 - B1_Mus1 SINE Alu -20 128 28 1 1630 1404 71 16 21 chrX 136988604 136988791 -29661505 - B2_Mm2 SINE B2 -8 187 2 1 1630 417 209 105 0 chrX 136988798 136988884 -29661412 - ID_B1 SINE B4 -1 223 129 1 1630 322 213 269 0 chrX 136988884 136988906 -29661390 - B1_Mur1 SINE Alu -1 148 12 1 1630 331 225 149 53 chrX 136988972 136989066 -29661230 - PB1D10 SINE Alu -8 109 7 1 1630 219 303 61 0 chrX 136989302 136989368 -29660928 - ID_B1 SINE B4 -68 156 87 1 1630 610 209 301 0 chrX 136989566 136989729 -29660567 - B3 SINE B2 -4 212 1 1 1630 630 225 19 45 chrX 136989731 136989914 -29660382 - B3A SINE B2 -8 187 1 1 1630 444 199 68 20 chrX 136989976 136990101 -29660195 - B1_Mur4 SINE Alu -18 132 1 1 1630 214 182 0 0 chrX 136990098 136990131 -29660165 + B1_Mus1 SINE Alu 2 34 -114 1 1630 404 204 161 0 chrX 136990131 136990224 -29660072 - PB1D9 SINE Alu -12 108 1 1 1630 258 333 110 10 chrX 136990224 136990324 -29659972 - PB1 SINE Alu -15 112 3 1 1630 689 213 7 7 chrX 136990351 136990488 -29659808 - B1_Mur1 SINE Alu -2 147 11 1 1630 278 298 41 109 chrX 136990358 136990505 -29659791 - B4 SINE B4 -75 217 81 1 1630 412 271 65 14 chrX 136992348 136992464 -29657832 + B1F2 SINE Alu 6 144 -5 1 1630 210 271 108 59 chrX 136992652 136992685 -29657611 - PB1D10 SINE Alu -2 115 9 1 1630 217 254 14 87 chrX 136992685 136992754 -29657542 - ID_B1 SINE B4 -71 153 90 1 1630 973 219 40 15 chrX 136993368 136993567 -29656729 - B3 SINE B2 -7 209 6 1 1630 1240 48 0 0 chrX 136993605 136993752 -29656544 + B1_Mus2 SINE Alu 1 147 0 1 1630 180 111 0 0 chrX 136993753 136993780 -29656516 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1 1630 411 295 44 18 chrX 136993868 136993982 -29656314 - B1_Mus2 SINE Alu -30 117 1 1 1630 402 160 26 39 chrX 136994054 136994067 -29656229 - B1_Mur4 SINE Alu 0 150 139 1 1630 1180 55 7 0 chrX 136994067 136994212 -29656084 - B1_Mus1 SINE Alu -1 147 2 1 1630 402 160 26 39 chrX 136994212 136994276 -29656020 - B1_Mur4 SINE Alu -12 138 74 1 1630 238 140 172 17 chrX 136994286 136994316 -29655980 + MT2C_Mm LTR ERVL 170 208 -267 1 1630 547 223 81 16 chrX 136994316 136994439 -29655857 + B1_Mur1 SINE Alu 4 134 -15 1 1630 242 282 64 98 chrX 136994451 136994624 -29655672 + ORR1A3-int LTR MaLR 1647 1813 -150 1 1630 505 244 73 0 chrX 136995164 136995287 -29655009 + B1_Mur1 SINE Alu 18 149 0 1 1630 690 119 187 0 chrX 136995323 136995457 -29654839 + Lx4A LINE L1 6899 7057 -1 1 1630 288 0 0 0 chrX 136995625 136995657 -29654639 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1630 180 0 0 0 chrX 136995711 136995731 -29654565 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1630 1015 96 134 0 chrX 136995785 136995942 -29654354 - B2_Mm1t SINE B2 -14 179 2 1 1630 280 250 256 8 chrX 136996081 136996198 -29654098 - ID_B1 SINE B4 -70 154 9 1 1630 1209 55 7 0 chrX 136996401 136996547 -29653749 - B1_Mus2 SINE Alu 0 147 1 1 1630 21 0 0 0 chrX 136996554 136996575 -29653721 + AT_rich Low_complexity Low_complexity 1 21 0 1 1630 324 238 30 12 chrX 136996960 136997070 -29653226 - B1F SINE Alu -1 148 10 1 1630 382 272 0 64 chrX 136997105 136997215 -29653081 + ID_B1 SINE B4 122 224 0 1 1630 210 302 45 45 chrX 136997235 136997301 -29652995 + ID SINE ID 6 71 -153 1 1630 676 196 7 43 chrX 136997482 136997621 -29652675 + B1_Mus1 SINE Alu 2 135 -13 1 1630 258 106 0 0 chrX 136997735 136997782 -29652514 + (T)n Simple_repeat Simple_repeat 1 47 0 1 1630 857 55 15 53 chrX 136997782 136997915 -29652381 - B1_Mm SINE Alu 0 147 20 1 1630 283 189 30 172 chrX 136997815 136997949 -29652347 - MT2B LTR ERVL -337 264 150 1 1630 465 225 34 47 chrX 136997949 136998098 -29652198 - L1MD LINE L1 -2458 3688 3542 1 1630 1244 34 0 7 chrX 136998188 136998336 -29651960 - B1_Mus1 SINE Alu -1 147 1 1 1630 261 203 16 0 chrX 136998336 136998400 -29651896 - Lx7 LINE L1 -21 7675 7611 1 1630 278 296 0 92 chrX 136998503 136998549 -29651747 - PB1D10 SINE Alu 0 117 81 1 1630 1234 66 59 32 chrX 136998549 136998736 -29651560 - B2_Mm1a SINE B2 0 193 2 1 1630 278 296 0 92 chrX 136998736 136998808 -29651488 - PB1D10 SINE Alu -37 80 10 1 1630 771 141 102 15 chrX 136998838 136998975 -29651321 - B1_Mur3 SINE Alu 0 149 1 1 1630 245 371 71 33 chrX 136999309 136999428 -29650868 + Charlie17a DNA MER1_type 10 128 -91 1 1630 1254 77 31 62 chrX 136999428 136999623 -29650673 - B2_Mm2 SINE B2 -5 190 2 1 1630 245 371 71 33 chrX 136999623 136999687 -29650609 + Charlie17a DNA MER1_type 129 200 -19 1 1630 342 0 0 0 chrX 136999962 137000000 -29650296 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1630 2998 186 111 6 chrX 137000403 137001027 -29649269 - Lx2B LINE L1 -4 6996 6308 1 1630 671 188 72 0 chrX 137001047 137001185 -29649111 - B1_Mus1 SINE Alu 0 148 1 2 1630 667 178 73 15 chrX 137001195 137001332 -29648964 - B1_Mus1 SINE Alu 0 148 4 3 1630 1147 153 21 0 chrX 137001353 137001543 -29648753 - B2_Mm2 SINE B2 0 195 2 4 1630 230 329 0 40 chrX 137003222 137003298 -29646998 - RSINE1 SINE B4 -86 79 7 5 1630 858 172 7 7 chrX 137003540 137003686 -29646610 + B1_Mus1 SINE Alu 2 147 -1 6 1630 267 146 18 18 chrX 137003815 137003871 -29646425 - Lx2A1 LINE L1 -280 6728 6673 7 1630 384 142 105 8 chrX 137003891 137003986 -29646310 + Lx2A1 LINE L1 6828 6936 -64 8 1630 1385 77 39 0 chrX 137004124 137004306 -29645990 - B2_Mm2 SINE B2 -5 190 2 9 1630 1102 95 0 13 chrX 137005304 137005453 -29644843 - B1_Mus1 SINE Alu 0 148 2 1 1630 317 136 231 48 chrX 137005558 137005612 -29644684 - RMER17C LTR ERVK -135 275 224 1 1630 522 0 0 0 chrX 137005612 137005670 -29644626 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 1630 317 136 231 48 chrX 137005670 137005762 -29644534 - RMER17C LTR ERVK -187 223 102 1 1630 1317 84 45 0 chrX 137006864 137007043 -29643253 - B2_Mm2 SINE B2 -7 188 2 1 1630 451 306 184 0 chrX 137007159 137007355 -29642941 - Tigger5 DNA MER2_type -2164 242 11 1 1630 1377 75 17 0 chrX 137007384 137007557 -29642739 - B2_Mm2 SINE B2 -19 176 1 1 1630 490 273 18 0 chrX 137007658 137007768 -29642528 - RSINE1 SINE B4 -18 147 36 1 1630 432 201 82 7 chrX 137007999 137008134 -29642162 + MLT1A LTR MaLR 19 163 -211 1 1630 279 236 13 89 chrX 137008583 137008662 -29641634 - ID2 SINE ID -10 73 1 1 1630 244 265 44 0 chrX 137008722 137008790 -29641506 - ID_B1 SINE B4 -31 193 123 1 1630 224 215 200 0 chrX 137008739 137008804 -29641492 - PB1 SINE Alu -21 106 29 2 1630 473 275 42 14 chrX 137008831 137008975 -29641321 - B1_Mur1 SINE Alu -1 148 1 2 1630 965 61 0 0 chrX 137008995 137009126 -29641170 - B1_Mus1 SINE Alu 0 148 18 2 1630 968 133 7 0 chrX 137009149 137009292 -29641004 - B1_Mur4 SINE Alu -6 144 1 2 1630 604 218 77 52 chrX 137009296 137009487 -29640809 - B3A SINE B2 -15 201 6 2 1630 678 110 141 8 chrX 137011201 137011329 -29638967 - B1_Mm SINE Alu -1 146 2 2 1630 395 271 82 19 chrX 137011540 137011698 -29638598 - Tigger7 DNA MER2_type -12 2479 2312 2 1630 426 307 88 0 chrX 137011880 137012017 -29638279 - RSINE1 SINE B4 -2 163 15 2 1630 336 132 269 21 chrX 137012044 137012137 -29638159 - B1_Mur1 SINE Alu -9 140 25 2 1630 447 52 0 0 chrX 137012137 137012195 -29638101 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1630 436 254 92 8 chrX 137012341 137012472 -29637824 - B1F SINE Alu -7 142 1 3 1630 211 269 39 0 chrX 137012721 137012773 -29637523 + B1F SINE Alu 30 83 -66 3 1630 188 34 0 33 chrX 137012784 137012814 -29637482 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1630 220 27 26 26 chrX 137013678 137013716 -29636580 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 3 1630 517 158 183 0 chrX 137013724 137013844 -29636452 - B1_Mur4 SINE Alu 0 150 9 3 1630 242 238 21 97 chrX 137013762 137013855 -29636441 - MT2B LTR ERVL -356 245 160 3 1630 323 247 9 126 chrX 137013855 137013966 -29636330 - B3A SINE B2 -3 195 98 3 1630 1068 88 0 0 chrX 137014054 137014191 -29636105 - B1_Mus2 SINE Alu -10 137 1 3 1630 244 291 50 12 chrX 137014302 137014382 -29635914 - B1F1 SINE Alu -66 83 1 3 1630 555 221 96 0 chrX 137014414 137014550 -29635746 + B1_Mur2 SINE Alu 1 149 0 3 1630 44 35 0 0 chrX 137014687 137014745 -29635551 + AT_rich Low_complexity Low_complexity 1 58 0 4 1630 299 228 0 0 chrX 137014828 137014885 -29635411 + ID SINE ID 3 59 -165 4 1630 610 198 31 23 chrX 137014976 137015105 -29635191 + B1_Mur4 SINE Alu 2 131 -19 4 1630 348 169 0 0 chrX 137015132 137015191 -29635105 - B1_Mur1 SINE Alu -38 111 53 4 1630 236 270 40 13 chrX 137015197 137015272 -29635024 - L1MCa LINE L1 -4383 2125 2049 4 1630 775 333 46 31 chrX 137015277 137015733 -29634563 - Lx8 LINE L1 -184 7289 6827 4 1630 344 152 196 19 chrX 137015825 137015932 -29634364 - RCHARR1 DNA MER1_type -39 935 810 4 1630 569 173 136 0 chrX 137015939 137016049 -29634247 - B1_Mur2 SINE Alu -7 142 18 4 1630 2388 258 65 47 chrX 137016053 137016380 -29633916 - RCHARR1 DNA MER1_type -171 803 481 4 1630 1104 202 14 0 chrX 137016380 137016588 -29633708 - B3 SINE B2 -5 211 1 4 1630 2388 258 65 47 chrX 137016588 137017048 -29633248 - RCHARR1 DNA MER1_type -494 480 2 4 1630 206 321 107 0 chrX 137017086 137017170 -29633126 - L2c LINE L2 -148 3239 3147 4 1630 1378 30 6 0 chrX 137017172 137017337 -29632959 + MERVL-int LTR ERVL 5195 5360 -125 5 1630 344 179 46 35 chrX 137017337 137017424 -29632872 + ORR1A3-int LTR MaLR 553 640 -1323 5 1630 284 0 27 0 chrX 137017424 137017461 -29632835 + MERVL-int LTR ERVL 5448 5485 0 5 1630 1487 26 14 6 chrX 137017461 137017679 -29632617 + MT2_Mm LTR ERVL 1 228 -247 5 1630 3787 36 7 0 chrX 137017709 137018156 -29632140 - L1Md_F2 LINE L1 -3 6579 6130 5 1630 532 129 12 0 chrX 137018360 137018445 -29631851 + B1_Mus2 SINE Alu 61 146 -1 5 1630 1410 195 90 13 chrX 137018442 137018743 -29631553 - MTD LTR MaLR -46 373 50 5 1630 619 175 57 28 chrX 137018748 137018889 -29631407 - RMER10B LTR ERVL -51 347 203 5 1630 1068 112 0 29 chrX 137018893 137018904 -29631392 - L1Md_F3 LINE L1 0 6584 6574 5 1630 1671 32 0 0 chrX 137018904 137019093 -29631203 - B2_Mm1a SINE B2 -3 190 2 5 1630 1068 112 0 29 chrX 137019093 137019256 -29631040 - L1Md_F3 LINE L1 -11 6573 6415 5 1630 887 224 102 0 chrX 137019295 137019491 -29630805 - B3 SINE B2 0 216 1 5 1630 340 175 0 16 chrX 137019491 137019555 -29630741 - MTD LTR MaLR -358 63 1 5 1630 269 320 13 0 chrX 137019557 137019632 -29630664 - RSINE1 SINE B4 -87 78 3 5 1630 650 150 16 0 chrX 137019680 137019807 -29630489 - RMER15 LTR ERVL -65 510 382 6 1630 272 273 140 77 chrX 137019842 137019983 -29630313 - RMER15 LTR ERVL -336 239 80 6 1630 1172 54 0 0 chrX 137019983 137020130 -29630166 - B1_Mus2 SINE Alu 0 147 1 6 1630 272 273 140 77 chrX 137020130 137020210 -29630086 - RMER15 LTR ERVL -496 79 4 6 1630 323 256 43 3 chrX 137020274 137020370 -29629926 - PB1D7 SINE Alu -18 102 5 6 1630 278 290 0 0 chrX 137020468 137020530 -29629766 + PB1D10 SINE Alu 7 68 -49 6 1630 1187 54 0 0 chrX 137020558 137020705 -29629591 + B1_Mus2 SINE Alu 1 147 0 6 1630 766 271 0 39 chrX 137020939 137021146 -29629150 - B3 SINE B2 -11 205 7 6 1630 335 239 45 11 chrX 137021161 137021250 -29629046 - ID_B1 SINE B4 -6 218 127 6 1630 692 233 99 9 chrX 137021730 137021951 -29628345 - L1MA5 LINE L1 -5 6295 6055 6 1630 426 244 106 8 chrX 137022076 137022208 -29628088 - B1F SINE Alu 0 149 5 6 1630 300 244 44 11 chrX 137022236 137022301 -29627995 - L1MEg LINE L1 -4139 1945 1882 6 1630 1162 82 0 0 chrX 137022301 137022447 -29627849 - B1_Mus2 SINE Alu 0 147 2 7 1630 300 244 44 11 chrX 137022447 137022472 -29627824 - L1MEg LINE L1 -4203 1881 1853 6 1630 659 232 47 75 chrX 137022556 137022688 -29627608 + B3 SINE B2 2 124 -92 7 1630 1318 91 32 0 chrX 137022688 137022874 -29627422 - B2_Mm1t SINE B2 -1 192 1 7 1630 659 232 47 75 chrX 137022874 137022955 -29627341 + B3 SINE B2 125 209 -7 7 1630 597 200 31 31 chrX 137022978 137023107 -29627189 + B1_Mur4 SINE Alu 1 129 -21 7 1630 293 0 27 0 chrX 137023107 137023144 -29627152 + (TC)n Simple_repeat Simple_repeat 1 38 0 7 1630 385 208 10 3 chrX 137023256 137023357 -29626939 - ID4 SINE ID -45 107 8 7 1630 489 274 81 43 chrX 137023363 137023573 -29626723 - L1MD1 LINE L1 -350 5892 5675 7 1630 1215 225 151 9 chrX 137023652 137024002 -29626294 - MTD LTR MaLR -14 405 6 7 1630 22 56 0 0 chrX 137024108 137024144 -29626152 + AT_rich Low_complexity Low_complexity 1 36 0 7 1630 377 20 20 0 chrX 137024144 137024194 -29626102 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 1630 352 263 0 0 chrX 137024206 137024282 -29626014 - B3A SINE B2 -57 141 66 8 1630 263 255 41 21 chrX 137024282 137024364 -29625932 - L1MA5 LINE L1 -529 5771 5687 6 1630 827 190 207 0 chrX 137024364 137024538 -29625758 + B3 SINE B2 1 210 -6 8 1630 244 263 15 79 chrX 137024538 137024653 -29625643 - L1MA5 LINE L1 -482 5692 5535 6 1630 739 158 120 0 chrX 137024656 137024789 -29625507 - B1_Mur4 SINE Alu 0 150 2 8 1630 542 271 170 24 chrX 137024894 137025147 -29625149 + B4A SINE B4 1 290 -2 8 1630 504 304 143 43 chrX 137025205 137025487 -29624809 + L1MDa LINE L1 648 1028 -5605 8 1630 180 0 0 0 chrX 137026698 137026718 -29623578 + (A)n Simple_repeat Simple_repeat 1 20 0 8 1630 626 311 92 16 chrX 137026952 137027266 -29623030 + L1MDa LINE L1 188 525 -6108 8 1630 337 153 14 14 chrX 137027959 137028032 -29622264 + CT-rich Low_complexity Low_complexity 1 73 0 8 1630 254 348 0 0 chrX 137028061 137028130 -29622166 - PB1D10 SINE Alu -32 85 17 8 1630 569 359 25 14 chrX 137028559 137028836 -29621460 + L4 LINE RTE 1557 1836 -193 8 1630 1177 196 15 0 chrX 137029305 137029504 -29620792 - B3 SINE B2 -14 202 1 9 1630 238 287 0 54 chrX 137029681 137029756 -29620540 + PB1D10 SINE Alu 31 104 -13 9 1630 1188 47 13 13 chrX 137029756 137029906 -29620390 + B1_Mur4 SINE Alu 1 150 0 9 1630 238 287 0 54 chrX 137029906 137029922 -29620374 + PB1D10 SINE Alu 105 117 0 9 1630 1488 50 0 27 chrX 137029936 137030121 -29620175 - B2_Mm2 SINE B2 -14 181 2 9 1630 257 122 24 0 chrX 137030247 137030288 -29620008 - ID_B1 SINE B4 -7 217 176 9 1630 222 151 77 18 chrX 137030288 137030309 -29619987 - B1F SINE Alu -1 130 49 9 1630 428 197 0 176 chrX 137030757 137030899 -29619397 - RSINE1 SINE B4 0 165 49 9 1630 578 254 0 16 chrX 137030954 137031082 -29619214 + ID_B1 SINE B4 86 211 -13 9 1630 1199 49 0 0 chrX 137031100 137031242 -29619054 - B1_Mm SINE Alu -4 143 2 9 1630 225 0 0 0 chrX 137031263 137031288 -29619008 + (GA)n Simple_repeat Simple_repeat 2 26 0 9 1630 783 303 100 31 chrX 137031288 137031552 -29618744 + L1MA5 LINE L1 5489 5778 -522 1 1630 324 0 0 0 chrX 137031552 137031588 -29618708 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 1630 783 299 96 33 chrX 137031588 137031812 -29618484 + L1MA5 LINE L1 5779 6022 -278 1 1630 369 75 0 0 chrX 137032335 137032388 -29617908 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1630 275 263 101 85 chrX 137032411 137032540 -29617756 - B3A SINE B2 -67 131 1 1 1630 700 127 16 23 chrX 137032567 137032696 -29617600 - B1_Mur3 SINE Alu 0 149 22 1 1630 186 43 0 0 chrX 137032696 137032719 -29617577 + (CCA)n Simple_repeat Simple_repeat 1 23 0 1 1630 217 321 24 12 chrX 137032735 137032820 -29617476 - PB1D10 SINE Alu -8 109 24 9 1630 1214 61 0 0 chrX 137033252 137033399 -29616897 - B1_Mus2 SINE Alu 0 147 1 1 1630 1114 170 48 14 chrX 137033411 137033620 -29616676 - B3 SINE B2 0 216 1 1 1630 199 262 116 23 chrX 137033939 137034025 -29616271 + L2 LINE L2 1963 2056 -1363 1 1630 353 234 13 0 chrX 137034110 137034187 -29616109 - ID4_ SINE ID -4 79 2 1 1630 182 91 30 0 chrX 137034200 137034233 -29616063 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1630 920 206 34 25 chrX 137034246 137034450 -29615846 - B3 SINE B2 -10 206 1 1 1630 288 333 0 39 chrX 137034486 137034589 -29615707 - PB1D10 SINE Alu -17 100 2 1 1630 243 180 0 0 chrX 137034647 137034697 -29615599 + T-rich Low_complexity Low_complexity 1 50 0 1 1630 1134 21 0 0 chrX 137034698 137034839 -29615457 - B1_Mus1 SINE Alu -1 147 7 1 1630 523 252 34 99 chrX 137034699 137034932 -29615364 - B4 SINE B4 -69 223 6 1 1630 468 296 0 66 chrX 137035160 137035312 -29614984 + B1F SINE Alu 1 142 -7 1 1630 869 264 0 32 chrX 137035467 137035686 -29614610 - B3 SINE B2 -4 212 1 1 1630 336 273 0 0 chrX 137035816 137035893 -29614403 - ID4 SINE ID -3 80 4 1 1630 204 125 0 0 chrX 137036455 137036487 -29613809 + (TGGGGG)n Simple_repeat Simple_repeat 2 33 0 1 1630 260 329 0 12 chrX 137036522 137036608 -29613688 + L2c LINE L2 3295 3379 -8 1 1630 252 324 44 32 chrX 137037168 137037336 -29612960 - MIR SINE MIR -9 259 82 1 1630 1325 262 80 7 chrX 137037708 137038146 -29612150 + L1MB3 LINE L1 5626 6095 -88 1 1630 246 167 65 32 chrX 137038153 137038215 -29612081 - MER2B DNA MER2_type -57 279 216 1 1630 222 37 0 0 chrX 137038244 137038271 -29612025 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1630 1208 41 14 0 chrX 137038273 137038418 -29611878 - B1_Mus1 SINE Alu 0 148 2 1 1630 525 163 28 75 chrX 137038418 137038524 -29611772 + B1_Mur2 SINE Alu 12 112 -37 1 1630 318 275 34 76 chrX 137038524 137038536 -29611760 + ID_B1 SINE B4 93 205 -19 1 1630 232 211 0 3 chrX 137039029 137039087 -29611209 + MIR SINE MIR 111 174 -94 1 1630 253 240 105 13 chrX 137039141 137039217 -29611079 + B1F SINE Alu 21 103 -46 1 1630 876 263 28 0 chrX 137039251 137039468 -29610828 + ID_B1 SINE B4 2 224 0 1 1630 711 270 83 5 chrX 137039492 137039697 -29610599 + ID_B1 SINE B4 4 224 0 1 1630 850 254 0 79 chrX 137039707 137039934 -29610362 + B3 SINE B2 2 210 -6 1 1630 261 368 68 0 chrX 137041488 137041605 -29608691 + MIRc SINE MIR 44 168 -100 1 1630 630 0 0 0 chrX 137041645 137041715 -29608581 + (TTTC)n Simple_repeat Simple_repeat 2 71 0 1 1630 802 159 0 7 chrX 137041720 137041859 -29608437 - B1_Mus2 SINE Alu -1 146 9 1 1630 732 157 13 103 chrX 137041879 137042035 -29608261 - B1_Mur1 SINE Alu -5 144 3 1 1630 374 244 50 50 chrX 137042297 137042418 -29607878 + MER102b DNA MER1_type 1 121 -220 1 1630 281 268 0 0 chrX 137042848 137042904 -29607392 + B4A SINE B4 88 143 -149 1 1630 458 261 0 0 chrX 137042854 137042946 -29607350 + PB1D10 SINE Alu 9 100 -17 1 1630 189 0 0 0 chrX 137042967 137042988 -29607308 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1630 3448 73 67 2 chrX 137043179 137043657 -29606639 + Lx3_Mus LINE L1 6485 6993 -16 1 1630 21 36 0 0 chrX 137043669 137043697 -29606599 + AT_rich Low_complexity Low_complexity 1 28 0 1 1630 411 296 80 22 chrX 137043803 137044028 -29606268 + L1MB8 LINE L1 5922 6159 -19 1 1630 1279 40 0 0 chrX 137044064 137044212 -29606084 - B1_Mus1 SINE Alu 0 148 1 1 1630 1543 43 0 36 chrX 137044242 137044436 -29605860 + B2_Mm1a SINE B2 1 187 -6 1 1630 303 122 0 0 chrX 137044456 137044505 -29605791 + (T)n Simple_repeat Simple_repeat 1 49 0 1 1630 400 308 56 71 chrX 137047076 137047328 -29602968 - MIRb SINE MIR -8 260 13 1 1630 261 83 0 0 chrX 137047615 137047651 -29602645 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 1 1630 1140 95 0 0 chrX 137047653 137047800 -29602496 - B1_Mus2 SINE Alu 0 147 1 1 1630 1165 222 198 12 chrX 137048843 137049162 -29601134 - MTEa LTR MaLR -1 378 1 1 1630 1064 220 5 9 chrX 137049931 137050142 -29600154 + B3 SINE B2 1 210 -6 1 1630 443 321 30 0 chrX 137050168 137050333 -29599963 + L1MB7 LINE L1 5879 6048 -136 1 1630 333 0 0 0 chrX 137050335 137050372 -29599924 + (TTTTG)n Simple_repeat Simple_repeat 5 41 0 1 1630 585 249 132 31 chrX 137050454 137050682 -29599614 + B4A SINE B4 3 253 -39 1 1630 201 338 14 0 chrX 137050714 137050785 -29599511 + (CA)n Simple_repeat Simple_repeat 2 73 0 1 1630 384 211 10 39 chrX 137050803 137050920 -29599376 + L1MB7 LINE L1 6058 6171 -13 1 1630 833 242 4 44 chrX 137050942 137051167 -29599129 + B3 SINE B2 1 216 0 1 1630 2236 118 30 64 chrX 137051173 137051352 -29598944 + MTC LTR MaLR 1 187 -234 1 1630 1959 145 9 130 chrX 137051352 137051805 -29598491 + RMER10B LTR ERVL 1 398 0 1 1630 2236 118 30 64 chrX 137051805 137052061 -29598235 + MTC LTR MaLR 188 421 0 1 1630 418 224 20 30 chrX 137052090 137052191 -29598105 + PB1D10 SINE Alu 12 111 -6 1 1630 184 371 0 22 chrX 137052226 137052317 -29597979 - L2 LINE L2 -626 2793 2705 1 1630 190 300 0 16 chrX 137053237 137053298 -29596998 + L2b LINE L2 3312 3371 -4 1 1630 420 328 0 0 chrX 137053564 137053680 -29596616 + ID_B1 SINE B4 92 207 -17 1 1630 275 0 0 28 chrX 137054231 137054267 -29596029 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1 1630 330 217 0 0 chrX 137054442 137054511 -29595785 - MIR3 SINE MIR -53 155 87 1 1630 206 0 0 65 chrX 137055654 137055685 -29594611 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1630 829 134 48 34 chrX 137055793 137055940 -29594356 - B1_Mur4 SINE Alu -1 149 1 1 1630 833 161 7 0 chrX 137055963 137056106 -29594190 + B1_Mur3 SINE Alu 6 149 0 1 1630 21 0 0 0 chrX 137056109 137056130 -29594166 + AT_rich Low_complexity Low_complexity 1 21 0 1 1630 365 262 79 39 chrX 137056193 137056320 -29593976 - B1F SINE Alu -2 147 16 1 1630 255 191 4 36 chrX 137057306 137057371 -29592925 + MIRc SINE MIR 180 243 -25 1 1630 204 214 24 0 chrX 137057488 137057530 -29592766 + CT-rich Low_complexity Low_complexity 2 44 0 1 1630 579 288 64 108 chrX 137057854 137058197 -29592099 + L1MC4a LINE L1 5534 5861 -2021 1 1630 482 209 11 0 chrX 137058220 137058311 -29591985 - PB1D10 SINE Alu -8 109 18 1 1630 920 126 29 7 chrX 137058329 137058465 -29591831 - B1_Mur4 SINE Alu -10 140 2 1 1630 228 285 94 50 chrX 137058466 137058494 -29591802 + L1MC4a LINE L1 5861 5885 -1997 1 1630 398 219 12 24 chrX 137058494 137058578 -29591718 + ID4_ SINE ID 1 83 0 1 1630 228 285 94 50 chrX 137058578 137058708 -29591588 + L1MC4a LINE L1 5886 6026 -1856 1 1630 200 292 44 62 chrX 137058825 137058938 -29591358 - L2c LINE L2 -267 3120 3010 1 1630 229 226 93 41 chrX 137059451 137059548 -29590748 + L1MA5 LINE L1 6182 6283 -17 1 1630 1022 159 20 55 chrX 137059548 137059748 -29590548 - B2_Mm2 SINE B2 0 195 3 1 1630 186 133 0 0 chrX 137059906 137059936 -29590360 + (CAG)n Simple_repeat Simple_repeat 3 32 0 1 1630 1466 74 5 0 chrX 137059949 137060139 -29590157 - B2_Mm1a SINE B2 -2 191 1 1 1630 181 384 15 15 chrX 137060332 137060467 -29589829 + MIR3 SINE MIR 66 200 -8 1 1630 1260 314 24 65 chrX 137060492 137060976 -29589320 - L1MC1 LINE L1 -20 6313 5848 1 1630 1160 151 78 55 chrX 137060976 137061194 -29589102 - URR1A DNA MER1_type -3 223 1 1 1630 1260 314 24 65 chrX 137061194 137061413 -29588883 - L1MC1 LINE L1 -486 5847 5639 1 1630 275 287 23 0 chrX 137061502 137061589 -29588707 - L1MCa LINE L1 -5858 650 562 1 1630 216 0 0 0 chrX 137061609 137061633 -29588663 + (CCCA)n Simple_repeat Simple_repeat 3 26 0 1 1630 720 121 0 0 chrX 137061637 137061769 -29588527 + (CA)n Simple_repeat Simple_repeat 2 133 0 1 1630 1209 244 62 30 chrX 137061786 137062154 -29588142 - L1MCa LINE L1 -5916 592 213 1 1630 230 227 238 40 chrX 137062234 137062335 -29587961 + ID_B1 SINE B4 95 215 -9 1 1630 308 349 0 9 chrX 137062449 137062559 -29587737 - B4A SINE B4 -8 284 176 1 1630 285 327 6 110 chrX 137062597 137062779 -29587517 - B4A SINE B4 -118 174 12 1 1630 216 228 0 0 chrX 137062809 137062866 -29587430 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1630 280 205 3 0 chrX 137062910 137062975 -29587321 - B1_Mur2 SINE Alu -1 148 51 1 1630 240 35 0 0 chrX 137063081 137063110 -29587186 + (CCA)n Simple_repeat Simple_repeat 3 31 0 1 1630 786 22 0 0 chrX 137063231 137063323 -29586973 + (TTTC)n Simple_repeat Simple_repeat 4 95 0 1 1630 180 0 0 0 chrX 137064208 137064228 -29586068 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 1630 394 281 0 156 chrX 137064377 137064550 -29585746 - B1F1 SINE Alu -2 147 2 1 1630 323 310 0 66 chrX 137064829 137064887 -29585409 + PB1D10 SINE Alu 2 57 -60 1 1630 2312 86 38 3 chrX 137064887 137065203 -29585093 + ORR1A2 LTR MaLR 1 327 0 1 1630 323 310 0 66 chrX 137065203 137065265 -29585031 + PB1D10 SINE Alu 58 114 -3 1 1630 433 313 89 17 chrX 137065930 137066109 -29584187 + MLT1J LTR MaLR 116 307 -205 1 1630 346 225 0 59 chrX 137066129 137066214 -29584082 + MLT1J LTR MaLR 361 440 -72 1 1630 412 315 52 41 chrX 137066941 137067209 -29583087 - L2 LINE L2 -410 3009 2739 1 1630 448 0 65 0 chrX 137067263 137067325 -29582971 + (TCTCC)n Simple_repeat Simple_repeat 2 67 0 1 1630 387 0 0 0 chrX 137067338 137067381 -29582915 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 1630 474 18 0 0 chrX 137067381 137067435 -29582861 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1630 313 200 0 32 chrX 137067671 137067733 -29582563 + PB1D9 SINE Alu 1 60 -60 2 1630 325 336 43 14 chrX 137067750 137067889 -29582407 - B1F SINE Alu 0 149 7 2 1630 1185 68 0 0 chrX 137068068 137068214 -29582082 + B1_Mus2 SINE Alu 1 146 -1 2 1630 273 57 0 0 chrX 137068214 137068249 -29582047 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1630 338 322 8 61 chrX 137068283 137068415 -29581881 + ID_B1 SINE B4 37 161 -63 2 1630 362 267 43 29 chrX 137069169 137069308 -29580988 + L1MB3 LINE L1 5999 6139 -44 2 1630 295 282 0 13 chrX 137069312 137069391 -29580905 + PB1 SINE Alu 1 78 -49 2 1630 792 251 52 5 chrX 137069436 137069628 -29580668 + B3 SINE B2 10 210 -6 2 1630 222 355 0 0 chrX 137069646 137069708 -29580588 + B1F2 SINE Alu 1 62 -87 2 1630 265 233 10 72 chrX 137070619 137070716 -29579580 + MIR SINE MIR 44 134 -128 2 1630 333 0 0 0 chrX 137070894 137070931 -29579365 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1630 246 171 16 31 chrX 137070931 137071058 -29579238 + (TA)n Simple_repeat Simple_repeat 2 126 0 2 1630 405 0 0 0 chrX 137071430 137071475 -29578821 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1630 219 211 0 0 chrX 137071586 137071624 -29578672 + polypyrimidine Low_complexity Low_complexity 3 40 0 2 1630 225 65 0 0 chrX 137071963 137071994 -29578302 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2 1630 927 92 76 0 chrX 137071999 137072130 -29578166 - B1_Mus2 SINE Alu -6 141 1 2 1630 443 218 58 29 chrX 137072555 137072659 -29577637 - PB1D10 SINE Alu -6 111 5 2 1630 258 281 81 25 chrX 137073791 137073927 -29576369 + MIRc SINE MIR 22 167 -109 2 1630 245 51 0 25 chrX 137074327 137074367 -29575929 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1630 625 174 250 0 chrX 137078472 137078644 -29571652 - B3 SINE B2 0 216 2 2 1630 310 202 190 0 chrX 137078677 137078756 -29571540 - PB1D10 SINE Alu -3 114 21 2 1630 275 211 42 14 chrX 137080010 137080082 -29570214 + 4.5SRNA scRNA scRNA 19 92 -2 2 1630 347 157 58 46 chrX 137080044 137080131 -29570165 + B1_Mus2 SINE Alu 58 145 -2 2 1630 184 268 54 0 chrX 137080653 137080709 -29569587 - MIRb SINE MIR -85 183 125 2 1630 450 246 136 0 chrX 137081246 137081364 -29568932 + B1_Mur3 SINE Alu 2 135 -14 2 1630 239 79 0 26 chrX 137081370 137081409 -29568887 + (GGAA)n Simple_repeat Simple_repeat 2 39 0 2 1630 363 60 0 0 chrX 137085145 137085195 -29565101 + (TC)n Simple_repeat Simple_repeat 2 51 0 2 1630 540 0 0 0 chrX 137085195 137085255 -29565041 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 1630 465 268 38 30 chrX 137086724 137086855 -29563441 - B1F2 SINE Alu -8 141 10 2 1630 224 242 0 70 chrX 137086795 137086866 -29563430 - B4A SINE B4 -142 150 85 2 1630 319 345 72 25 chrX 137087690 137087925 -29562371 + ORR1D2 LTR MaLR 6 251 -119 2 1630 221 0 0 33 chrX 137089520 137089550 -29560746 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1630 1042 101 0 0 chrX 137089550 137089688 -29560608 - B1_Mus1 SINE Alu -10 138 1 2 1630 194 321 25 13 chrX 137091120 137091199 -29559097 - MIRb SINE MIR -153 115 36 2 1630 183 290 129 0 chrX 137092357 137092419 -29557877 + L2a LINE L2 3357 3426 0 2 1630 6050 71 19 0 chrX 137094751 137095528 -29554768 + L1_Mus3 LINE L1 5834 6625 -13 2 1630 1026 109 0 20 chrX 137095528 137095678 -29554618 + B1_Mus1 SINE Alu 2 148 0 2 1630 253 349 128 0 chrX 137095846 137095995 -29554301 - MIRb SINE MIR -5 263 96 2 1630 665 225 206 33 chrX 137096385 137096569 -29553727 + ID_B1 SINE B4 2 217 -7 2 1630 348 338 67 30 chrX 137096953 137097118 -29553178 - MIR3 SINE MIR -23 185 15 2 1630 229 339 0 0 chrX 137097201 137097263 -29553033 - MIR SINE MIR -101 107 46 2 1630 1662 32 0 0 chrX 137097973 137098163 -29552133 - B2_Mm1a SINE B2 -2 191 2 2 1630 241 256 3 24 chrX 137099456 137099561 -29550735 - MIR SINE MIR -161 107 4 2 1630 255 324 86 77 chrX 137100922 137101143 -29549153 - MIRb SINE MIR -8 260 38 2 1631 208 359 0 0 chrX 137107576 137107640 -29542656 - MIRm SINE MIR 0 276 213 2 1631 226 220 17 0 chrX 137108023 137108067 -29542229 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1631 600 14 0 0 chrX 137108067 137108136 -29542160 + (TC)n Simple_repeat Simple_repeat 1 69 0 2 1631 226 220 17 0 chrX 137108136 137108150 -29542146 + (CA)n Simple_repeat Simple_repeat 1 14 0 2 1631 193 238 15 31 chrX 137108187 137108252 -29542044 + MIR SINE MIR 85 148 -60 2 1631 559 238 21 14 chrX 137108615 137108760 -29541536 + MIRc SINE MIR 121 266 -2 2 1631 254 327 0 84 chrX 137109008 137109115 -29541181 - Charlie15a DNA MER1_type -27 197 100 2 1631 409 209 132 9 chrX 137113774 137113880 -29536416 + Lx8 LINE L1 6688 6806 -667 2 1631 1292 262 95 52 chrX 137113884 137114347 -29535949 + Lx8 LINE L1 6984 7466 -7 2 1631 403 287 70 0 chrX 137115393 137115550 -29534746 - MER113A DNA MER1_type -146 168 1 2 1631 233 140 19 39 chrX 137117321 137117373 -29532923 + (TCTA)n Simple_repeat Simple_repeat 2 52 0 2 1631 380 322 11 33 chrX 137117869 137118049 -29532247 - MIR3 SINE MIR -17 191 16 2 1631 252 348 48 24 chrX 137118869 137119034 -29531262 + MIR3 SINE MIR 35 203 -5 2 1631 860 122 0 33 chrX 137119175 137119328 -29530968 + Lx2A1 LINE L1 6770 6917 -91 2 1631 528 279 0 30 chrX 137119900 137120033 -29530263 - ID_B1 SINE B4 -16 208 80 2 1631 481 340 25 12 chrX 137120825 137120986 -29529310 - B3A SINE B2 -33 165 3 2 1631 444 288 43 70 chrX 137121210 137121468 -29528828 - L3b LINE CR1 -196 286 36 2 1631 216 164 43 29 chrX 137121809 137121878 -29528418 + T-rich Low_complexity Low_complexity 5 74 0 2 1631 197 323 47 75 chrX 137122340 137122447 -29527849 + L2a LINE L2 3319 3422 -4 2 1631 291 54 0 0 chrX 137123956 137123993 -29526303 + (A)n Simple_repeat Simple_repeat 1 37 0 2 1631 1429 255 41 18 chrX 137126679 137127070 -29523226 + L1MB5 LINE L1 5628 6027 -147 2 1631 370 325 44 38 chrX 137127198 137127358 -29522938 - Tigger12c DNA MER2_type -560 174 14 2 1631 24 53 0 0 chrX 137127691 137127729 -29522567 + AT_rich Low_complexity Low_complexity 1 38 0 2 1631 521 250 17 0 chrX 137127957 137128073 -29522223 + B1F SINE Alu 1 118 -31 2 1631 729 91 41 0 chrX 137128542 137128663 -29521633 - B1_Mur4 SINE Alu -1 149 24 2 1631 22 0 0 0 chrX 137128691 137128713 -29521583 + AT_rich Low_complexity Low_complexity 1 22 0 2 1631 998 69 124 0 chrX 137128878 137129023 -29521273 - B2_Mm2 SINE B2 -31 164 2 2 1631 754 138 55 55 chrX 137129048 137129194 -29521102 + B1_Mus2 SINE Alu 1 146 -1 2 1631 1079 65 0 14 chrX 137129490 137129631 -29520665 + B1_Mm SINE Alu 1 139 -8 2 1631 822 199 40 0 chrX 137129713 137129864 -29520432 + B3A SINE B2 1 157 -41 2 1631 182 301 47 24 chrX 137130396 137130481 -29519815 + L3b LINE CR1 79 165 -317 2 1631 222 286 0 0 chrX 137131557 137131627 -29518669 - MIR SINE MIR -96 112 43 2 1631 387 0 0 0 chrX 137131757 137131800 -29518496 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1631 441 95 0 0 chrX 137133128 137133191 -29517105 + (A)n Simple_repeat Simple_repeat 1 63 0 2 1631 189 74 0 0 chrX 137133297 137133324 -29516972 + (TCC)n Simple_repeat Simple_repeat 1 27 0 2 1631 204 234 0 86 chrX 137133338 137133408 -29516888 + C-rich Low_complexity Low_complexity 1 64 0 2 1631 24 0 0 0 chrX 137133589 137133613 -29516683 + GC_rich Low_complexity Low_complexity 1 24 0 2 1631 305 82 0 20 chrX 137133711 137133761 -29516535 + (CCG)n Simple_repeat Simple_repeat 2 50 0 2 1631 216 143 40 20 chrX 137133812 137133862 -29516434 + (CCCG)n Simple_repeat Simple_repeat 1 51 0 2 1631 209 171 0 0 chrX 137134151 137134186 -29516110 + (CCG)n Simple_repeat Simple_repeat 3 37 0 2 1631 21 0 0 0 chrX 137134280 137134301 -29515995 + GC_rich Low_complexity Low_complexity 1 21 0 2 1631 273 119 0 0 chrX 137134313 137134355 -29515941 + (T)n Simple_repeat Simple_repeat 1 42 0 2 1631 276 190 90 23 chrX 137135651 137135748 -29514548 + PB1D9 SINE Alu 15 118 -2 2 1631 21 71 0 0 chrX 137136207 137136249 -29514047 + AT_rich Low_complexity Low_complexity 1 42 0 2 1631 340 354 41 0 chrX 137136807 137136954 -29513342 - L2b LINE L2 -8 3367 3215 2 1631 234 343 29 0 chrX 137137066 137137136 -29513160 + tRNA-Ala-GCY_ tRNA tRNA 1 72 -3 2 1631 878 91 6 106 chrX 137137320 137137480 -29512816 - L1_Mus2 LINE L1 -1 6565 6422 2 1631 1119 81 6 24 chrX 137137480 137137639 -29512657 + L1_Mus2 LINE L1 6202 6357 -209 2 1631 250 310 22 44 chrX 137137645 137137736 -29512560 - Tigger5 DNA MER2_type -27 2379 2291 2 1631 360 252 10 20 chrX 137137826 137137927 -29512369 - Tigger5 DNA MER2_type -2301 105 6 2 1631 313 356 94 39 chrX 137138245 137138479 -29511817 - MIR SINE MIR -4 258 12 2 1631 207 0 0 0 chrX 137138696 137138719 -29511577 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1631 1096 58 7 0 chrX 137138719 137138856 -29511440 - B1_Mm SINE Alu -9 138 1 2 1631 332 323 0 8 chrX 137138856 137138981 -29511315 - MIR SINE MIR -30 232 109 2 1631 489 304 107 10 chrX 137139224 137139513 -29510783 - Charlie4a DNA MER1_type -13 495 179 2 1631 231 294 178 67 chrX 137139730 137139837 -29510459 + B4A SINE B4 142 271 -21 2 1631 261 0 0 0 chrX 137139837 137139866 -29510430 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1631 231 294 178 67 chrX 137139866 137139893 -29510403 + B4A SINE B4 272 291 -1 2 1631 293 281 74 20 chrX 137139911 137140060 -29510236 - Charlie4a DNA MER1_type -300 208 52 2 1631 413 344 24 48 chrX 137140110 137140278 -29510018 + RSINE1 SINE B4 2 165 0 2 1631 240 263 0 0 chrX 137140284 137140341 -29509955 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 1631 605 281 52 19 chrX 137140345 137140555 -29509741 - ID_B1 SINE B4 -6 218 2 3 1631 235 184 0 20 chrX 137140556 137140606 -29509690 - L1M3 LINE L1 -402 5778 5730 3 1631 724 261 21 11 chrX 137140941 137141127 -29509169 + B3 SINE B2 4 191 -25 3 1631 245 119 81 48 chrX 137141372 137141434 -29508862 + MTC LTR MaLR 25 88 -333 3 1631 203 203 17 0 chrX 137141451 137141510 -29508786 + G-rich Low_complexity Low_complexity 3 62 0 3 1631 266 76 44 29 chrX 137141972 137142040 -29508256 + (TTTG)n Simple_repeat Simple_repeat 2 70 0 3 1631 252 195 101 22 chrX 137142673 137142762 -29507534 - L1MA9 LINE L1 0 6312 6217 3 1631 414 0 0 0 chrX 137142816 137142862 -29507434 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1631 188 308 100 27 chrX 137142977 137143087 -29507209 - L2c LINE L2 -168 3219 3102 3 1631 354 343 0 0 chrX 137143185 137143284 -29507012 - ID_B1 SINE B4 -123 101 3 3 1631 219 167 0 0 chrX 137143411 137143453 -29506843 + CT-rich Low_complexity Low_complexity 3 44 0 3 1631 1142 88 0 0 chrX 137143486 137143633 -29506663 - B1_Mus1 SINE Alu 0 148 2 3 1631 908 276 82 51 chrX 137143633 137144265 -29506031 - L1PB4 LINE L1 -327 5829 5092 3 1631 340 321 101 0 chrX 137144276 137144385 -29505911 - PB1 SINE Alu -5 122 3 3 1631 217 239 0 21 chrX 137144408 137144469 -29505827 + MIRb SINE MIR 206 267 -1 3 1631 348 143 0 0 chrX 137145748 137145818 -29504478 + (TG)n Simple_repeat Simple_repeat 2 71 0 3 1631 309 266 0 0 chrX 137145831 137145895 -29504401 - B4 SINE B4 -4 288 225 3 1631 1362 196 43 25 chrX 137145903 137146181 -29504115 - Lx6 LINE L1 -99 7361 7079 3 1631 2536 199 16 29 chrX 137146182 137146727 -29503569 + Lx6 LINE L1 5587 6095 -1365 3 1631 281 317 323 6 chrX 137146734 137146907 -29503389 - B4A SINE B4 -63 229 2 3 1631 520 304 15 49 chrX 137146966 137147170 -29503126 - Tigger16a DNA Tigger -3 930 734 3 1631 483 18 0 0 chrX 137147318 137147374 -29502922 + (TTTTG)n Simple_repeat Simple_repeat 3 58 0 3 1631 971 32 98 0 chrX 137147374 137147497 -29502799 - B1_Mus2 SINE Alu -12 135 1 3 1631 312 257 49 56 chrX 137147514 137147658 -29502638 - MIRb SINE MIR 0 268 126 3 1631 590 231 36 48 chrX 137147671 137147839 -29502457 - MER5A1 DNA MER1_type 0 166 1 3 1631 242 258 48 0 chrX 137148916 137148978 -29501318 - ID4 SINE ID -18 65 1 3 1631 222 118 0 0 chrX 137149670 137149704 -29500592 + (TCCA)n Simple_repeat Simple_repeat 4 37 0 3 1631 531 254 16 0 chrX 137149709 137149831 -29500465 - B3 SINE B2 -16 200 77 3 1631 447 210 0 0 chrX 137149949 137150049 -29500247 + (TA)n Simple_repeat Simple_repeat 1 100 0 3 1631 230 51 51 0 chrX 137150072 137150111 -29500185 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 3 1631 180 0 0 0 chrX 137150716 137150736 -29499560 + (CAGT)n Simple_repeat Simple_repeat 4 23 0 3 1631 582 180 47 0 chrX 137151484 137151612 -29498684 + L1_Mur3 LINE L1 1444 1577 -4303 3 1631 4038 220 51 1 chrX 137151589 137152511 -29497785 + L1_Mur3 LINE L1 3221 4188 -1692 3 1631 414 0 0 0 chrX 137152511 137152557 -29497739 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1631 2309 192 59 34 chrX 137152563 137153122 -29497174 + L1_Mur3 LINE L1 4647 5219 -661 3 1631 557 152 89 24 chrX 137153130 137153273 -29497023 + ORR1B2 LTR MaLR 1 162 -167 3 1631 884 91 42 0 chrX 137153273 137153416 -29496880 - L1_Mur2 LINE L1 -4241 1636 1488 3 1631 5176 196 49 50 chrX 137153407 137154883 -29495413 - Lx2 LINE L1 0 6997 5524 3 1631 2224 70 16 2 chrX 137154878 137155286 -29495010 - L1_Mur2 LINE L1 -4352 1525 1108 3 1631 1178 68 0 0 chrX 137155296 137155442 -29494854 - B1_Mus1 SINE Alu -2 146 1 3 1631 645 96 0 0 chrX 137155448 137155542 -29494754 + (TTTC)n Simple_repeat Simple_repeat 4 97 0 3 1631 386 228 176 42 chrX 137155809 137155928 -29494368 - B1_Mur1 SINE Alu -13 136 2 3 1631 294 0 0 0 chrX 137156716 137156752 -29493544 - L1_Mur2 LINE L1 -5969 743 708 3 1631 960 70 0 0 chrX 137156752 137156881 -29493415 + B1_Mus1 SINE Alu 9 137 -11 3 1631 216 0 0 0 chrX 137156881 137156905 -29493391 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 3 1631 3037 131 18 18 chrX 137156905 137157402 -29492894 - L1_Mur2 LINE L1 -6007 705 209 3 1631 230 231 92 0 chrX 137157753 137157818 -29492478 - ORR1E LTR MaLR -19 340 270 3 1631 907 294 111 46 chrX 137157914 137158385 -29491911 - L1MB1 LINE L1 -2 6166 5680 3 1631 4232 107 16 13 chrX 137158385 137159019 -29491277 - Lx LINE L1 0 6654 6019 3 1631 907 294 111 46 chrX 137159019 137159271 -29491025 - L1MB1 LINE L1 -489 5679 5396 3 1631 1103 278 52 37 chrX 137159357 137159750 -29490546 + MTD LTR MaLR 13 403 -16 3 1631 306 292 9 36 chrX 137159760 137159870 -29490426 - RLTR14 LTR ERV1 0 382 276 3 1631 2728 164 77 28 chrX 137160063 137160607 -29489689 + Lx5 LINE L1 6467 7037 -13 3 1631 847 98 15 0 chrX 137160607 137160740 -29489556 - B1_Mus1 SINE Alu -1 147 13 3 1631 444 335 20 20 chrX 137160761 137160913 -29489383 + B3A SINE B2 1 152 -46 3 1631 329 0 24 0 chrX 137160914 137160955 -29489341 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1631 775 236 40 5 chrX 137160984 137161184 -29489112 - L1MB1 LINE L1 -1137 5003 4797 3 1631 206 0 0 65 chrX 137161207 137161238 -29489058 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1631 362 192 11 7 chrX 137161273 137161374 -29488922 - L1MB1 LINE L1 -2198 3948 3847 3 1631 3631 276 75 35 chrX 137161375 137162731 -29487565 + Lx7 LINE L1 6039 7470 -3 3 1631 525 285 134 5 chrX 137162964 137163151 -29487145 - B3 SINE B2 -4 212 2 3 1631 530 285 0 35 chrX 137163441 137163583 -29486713 - RSINE1 SINE B4 -21 144 8 3 1631 217 346 56 51 chrX 137163732 137163816 -29486480 - MIR SINE MIR -14 248 165 3 1631 1374 66 27 5 chrX 137163816 137164000 -29486296 - B2_Mm2 SINE B2 -6 189 2 3 1631 298 331 28 28 chrX 137164000 137164125 -29486171 - MIRb SINE MIR -103 165 46 3 1631 489 292 0 0 chrX 137164125 137164269 -29486027 - B1F SINE Alu -1 148 5 3 1631 298 331 27 27 chrX 137164269 137164296 -29486000 - MIRb SINE MIR -223 45 17 3 1631 224 339 34 8 chrX 137164367 137164486 -29485810 - L3 LINE CR1 -101 4388 4267 3 1631 576 70 0 0 chrX 137164559 137164645 -29485651 + (TTCC)n Simple_repeat Simple_repeat 1 86 0 3 1631 3590 126 11 16 chrX 137164647 137165221 -29485075 - Lx3A LINE L1 -16 6965 6395 3 1631 186 281 0 0 chrX 137165276 137165340 -29484956 + (TATG)n Simple_repeat Simple_repeat 4 67 0 3 1631 1572 226 50 44 chrX 137165414 137165873 -29484423 - RLTR17 LTR ERVK -126 566 105 3 1631 1497 233 24 14 chrX 137165954 137166283 -29484013 + ORR1D1 LTR MaLR 1 328 -46 3 1631 1901 131 41 9 chrX 137166283 137166599 -29483697 + ORR1A3 LTR MaLR 1 326 0 3 1631 1497 233 24 14 chrX 137166599 137166639 -29483657 + ORR1D1 LTR MaLR 329 373 -1 3 1631 216 219 0 3 chrX 137167032 137167081 -29483215 - L2a LINE L2 0 3426 3340 3 1631 465 19 0 0 chrX 137167275 137167329 -29482967 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1631 510 263 0 0 chrX 137167760 137167874 -29482422 - PB1D10 SINE Alu -1 116 3 3 1631 525 124 0 20 chrX 137168212 137168311 -29481985 + Lx LINE L1 6542 6638 -16 3 1631 1168 94 82 0 chrX 137168405 137168576 -29481720 - B2_Mm1t SINE B2 -7 186 2 3 1631 238 286 330 0 chrX 137168652 137168764 -29481532 - RSINE1 SINE B4 -16 149 1 3 1631 352 217 14 0 chrX 137168870 137168939 -29481357 + ID4 SINE ID 2 71 -12 3 1631 427 273 120 8 chrX 137169438 137169571 -29480725 + B1F1 SINE Alu 1 148 -1 3 1631 1676 21 0 10 chrX 137170414 137170609 -29479687 - B2_Mm1t SINE B2 0 193 1 3 1631 1676 21 0 10 chrX 137170626 137170821 -29479475 - B2_Mm1t SINE B2 0 193 1 3 1631 1676 21 0 10 chrX 137170826 137171021 -29479275 - B2_Mm1t SINE B2 0 193 1 3 1631 1238 44 0 12 chrX 137171022 137171184 -29479112 - B2_Mm1t SINE B2 -1 192 33 3 1631 29 47 0 0 chrX 137171405 137171448 -29478848 + AT_rich Low_complexity Low_complexity 1 43 0 3 1631 410 266 67 26 chrX 137171498 137171691 -29478605 - L1M4 LINE L1 -1401 4745 4545 3 1631 1933 147 24 84 chrX 137171788 137172167 -29478129 - ORR1B1 LTR MaLR 0 394 39 3 1631 483 188 149 6 chrX 137172172 137172333 -29477963 - Lx9 LINE L1 -73 7571 7388 3 1631 229 345 0 11 chrX 137172503 137172591 -29477705 - Lx9 LINE L1 -171 7473 7387 3 1631 1798 154 205 116 chrX 137172591 137173098 -29477198 + RMER15 LTR ERVL 23 574 -1 3 1631 1055 282 89 24 chrX 137173099 137173177 -29477119 - Lx9 LINE L1 -947 6697 6610 3 1631 228 35 0 0 chrX 137173177 137173206 -29477090 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 3 1631 1055 282 89 24 chrX 137173206 137173635 -29476661 - Lx9 LINE L1 -1035 6609 6157 3 1631 915 248 94 91 chrX 137173654 137174173 -29476123 - L1M4 LINE L1 -1769 4377 3857 3 1631 23 78 0 0 chrX 137174389 137174440 -29475856 + AT_rich Low_complexity Low_complexity 1 51 0 3 1631 247 316 67 42 chrX 137174738 137174857 -29475439 + MIR SINE MIR 15 136 -126 3 1631 493 282 25 25 chrX 137174966 137175126 -29475170 + RSINE1 SINE B4 4 163 -2 3 1631 497 248 0 9 chrX 137175321 137175427 -29474869 + ID_B1 SINE B4 118 222 -2 3 1631 1136 69 14 0 chrX 137175752 137175897 -29474399 + B1_Mus1 SINE Alu 1 147 -1 3 1631 1017 58 7 0 chrX 137176065 137176203 -29474093 - L1Md_F2 LINE L1 -9 6573 6435 3 1631 268 375 51 15 chrX 137176238 137176424 -29473872 - MLT1L LTR MaLR -59 551 359 3 1631 465 31 31 0 chrX 137176424 137176489 -29473807 + B1_Mus1 SINE Alu 1 67 -81 3 1631 1159 97 60 99 chrX 137176547 137176799 -29473497 - 7SK RNA RNA -88 243 2 3 1631 463 268 134 0 chrX 137176805 137176917 -29473379 - B1_Mus2 SINE Alu -20 127 1 3 1631 517 202 67 8 chrX 137177427 137177547 -29472749 + MER20 DNA MER1_type 92 218 -1 3 1631 320 344 191 31 chrX 137177668 137177893 -29472403 + MLT1I LTR MaLR 71 331 -80 3 1631 967 225 26 11 chrX 137177925 137178114 -29472182 - B3 SINE B2 -2 214 23 3 1631 567 282 41 5 chrX 137178175 137178396 -29471900 + L1M4 LINE L1 4891 5119 -1027 3 1631 681 340 79 34 chrX 137178544 137179137 -29471159 - L2 LINE L2 -1111 2308 1689 4 1631 293 330 160 38 chrX 137179184 137179685 -29470611 - L2 LINE L2 -2074 1345 784 4 1631 328 253 68 11 chrX 137179736 137179824 -29470472 - PB1D10 SINE Alu -1 116 24 4 1631 213 39 0 0 chrX 137179842 137179868 -29470428 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 4 1631 520 149 212 34 chrX 137179871 137179989 -29470307 - B1_Mus2 SINE Alu -8 139 1 4 1631 1405 127 18 22 chrX 137180195 137180421 -29469875 - URR1A DNA MER1_type -1 225 1 4 1631 439 292 62 75 chrX 137180421 137180502 -29469794 + CYRA11_Mm Unknown Y-chromosome 170 472 -145 4 1631 302 216 55 33 chrX 137180747 137180838 -29469458 - L1MC4 LINE L1 -7 8035 7943 4 1631 260 252 87 56 chrX 137181012 137181138 -29469158 - L1MC4 LINE L1 -217 7825 7696 4 1631 249 279 0 0 chrX 137181165 137181233 -29469063 - L1MC4 LINE L1 -458 7584 7517 4 1631 302 293 0 0 chrX 137181358 137181457 -29468839 - L1MC4 LINE L1 -757 7285 7187 4 1631 278 264 14 0 chrX 137181648 137181720 -29468576 - L1MC4 LINE L1 -1190 6852 6780 4 1631 392 196 18 18 chrX 137181741 137181850 -29468446 - Lx9 LINE L1 0 7644 7536 4 1631 2180 138 36 11 chrX 137181850 137182210 -29468086 - ORR1C1 LTR MaLR -1 377 9 4 1631 229 244 47 0 chrX 137182220 137182306 -29467990 - Lx5 LINE L1 -11 7039 6950 4 1631 1873 73 21 35 chrX 137182512 137182794 -29467502 - L1_Mus2 LINE L1 0 6566 6289 4 1631 261 32 0 0 chrX 137182794 137182825 -29467471 - ORR1C2 LTR MaLR -353 31 1 4 1631 4269 199 74 11 chrX 137182861 137183301 -29466995 - Lx9 LINE L1 -168 7476 7025 4 1631 2045 124 33 56 chrX 137183301 137183661 -29466635 - Lx LINE L1 0 6654 6303 4 1631 4269 199 74 11 chrX 137183661 137184174 -29466122 - Lx9 LINE L1 -620 7024 6464 4 1631 226 224 68 93 chrX 137184181 137184299 -29465997 - Zaphod2 DNA Tip100 -1909 1615 1501 4 1631 298 273 77 47 chrX 137184688 137184857 -29465439 - L1MC4 LINE L1 -1392 6650 6477 4 1631 1135 68 0 20 chrX 137184861 137184874 -29465422 - B1_Mm SINE Alu 0 147 138 4 1631 805 66 6 44 chrX 137184874 137185032 -29465264 + (TTC)n Simple_repeat Simple_repeat 2 153 0 4 1631 1135 68 0 20 chrX 137185032 137185168 -29465128 - B1_Mm SINE Alu -10 137 2 4 1631 635 385 50 20 chrX 137185342 137185685 -29464611 + MLT1D LTR MaLR 1 369 -258 4 1631 8406 118 28 3 chrX 137185685 137187159 -29463137 + Lx2 LINE L1 5488 6996 -1 4 1631 709 302 28 9 chrX 137187177 137187391 -29462905 + MLT1D LTR MaLR 288 505 0 4 1631 27 0 0 0 chrX 137188277 137188304 -29461992 + AT_rich Low_complexity Low_complexity 1 27 0 4 1631 195 273 55 0 chrX 137188461 137188516 -29461780 + L2c LINE L2 3251 3308 -79 4 1631 297 321 26 35 chrX 137189053 137189166 -29461130 - PB1D10 SINE Alu 0 117 6 4 1631 1299 259 36 21 chrX 137189239 137189626 -29460670 - Lx9 LINE L1 -791 6853 6461 4 1631 488 344 21 4 chrX 137189665 137189907 -29460389 + Lx9 LINE L1 7204 7449 -195 4 1631 303 28 0 0 chrX 137189909 137189945 -29460351 + (TATG)n Simple_repeat Simple_repeat 2 37 0 4 1631 366 264 63 18 chrX 137190207 137190320 -29459976 - B1F1 SINE Alu -10 140 6 4 1631 408 344 32 8 chrX 137190361 137190487 -29459809 + RSINE1 SINE B4 7 135 -30 4 1631 359 41 0 20 chrX 137190493 137190543 -29459753 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1631 198 291 126 11 chrX 137190966 137191053 -29459243 - L2b LINE L2 -23 3403 3307 4 1631 437 345 37 37 chrX 137191081 137191298 -29458998 + MIR SINE MIR 46 262 0 4 1631 386 279 38 23 chrX 137191575 137191707 -29458589 + MER58B DNA MER1_type 208 341 0 4 1631 220 339 15 0 chrX 137191707 137191772 -29458524 - L2b LINE L2 -308 3067 3002 4 1631 605 216 13 67 chrX 137191963 137192112 -29458184 - B1_Mur1 SINE Alu -4 145 5 4 1631 209 284 15 0 chrX 137192194 137192261 -29458035 + (TATG)n Simple_repeat Simple_repeat 3 70 0 4 1631 1037 302 25 32 chrX 137192263 137192547 -29457749 - B4 SINE B4 0 292 11 4 1631 831 163 74 23 chrX 137192673 137192849 -29457447 - B2_Mm2 SINE B2 -10 185 1 4 1631 261 0 0 0 chrX 137192981 137193010 -29457286 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 1631 380 252 98 65 chrX 137193193 137193346 -29456950 + MER103 DNA DNA 2 159 -7 4 1631 341 325 145 17 chrX 137193621 137193856 -29456440 - L2a LINE L2 -27 3399 3135 4 1631 1105 85 0 7 chrX 137193973 137194127 -29456169 - B2_Mm1t SINE B2 -1 192 40 4 1631 260 352 45 45 chrX 137194162 137194364 -29455932 - L2a LINE L2 -421 2998 2797 4 1631 649 330 102 48 chrX 137194406 137194865 -29455431 - L2a LINE L2 -816 2603 2120 4 1631 862 159 15 0 chrX 137196411 137196543 -29453753 - B1_Mus2 SINE Alu -9 138 5 4 1631 466 257 106 5 chrX 137196720 137196908 -29453388 - L1MB4 LINE L1 -25 6155 5949 4 1631 273 256 75 32 chrX 137197378 137197471 -29452825 + MTE2a LTR MaLR 269 365 -14 4 1631 436 230 301 8 chrX 137197883 137198145 -29452151 - L1M3 LINE L1 -880 5432 5095 4 1631 378 0 0 0 chrX 137198454 137198496 -29451800 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1631 414 0 0 0 chrX 137199048 137199094 -29451202 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1631 346 145 0 57 chrX 137199624 137199712 -29450584 + (CGG)n Simple_repeat Simple_repeat 3 85 0 4 1631 241 362 80 18 chrX 137201283 137201446 -29448850 + MIRb SINE MIR 17 189 -79 4 1631 403 380 0 24 chrX 137202888 137203055 -29447241 - RSINE1 SINE B4 0 165 3 4 1631 411 21 0 0 chrX 137203887 137203935 -29446361 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1631 22 0 0 0 chrX 137204441 137204463 -29445833 + AT_rich Low_complexity Low_complexity 1 22 0 4 1631 596 119 428 7 chrX 137204792 137204944 -29445352 + B3 SINE B2 1 216 0 4 1631 187 396 52 23 chrX 137205205 137205378 -29444918 - MIRc SINE MIR -37 231 54 4 1631 214 143 0 39 chrX 137205406 137205457 -29444839 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1631 537 235 53 8 chrX 137205576 137205709 -29444587 - B1F1 SINE Alu -1 148 10 4 1631 262 298 23 35 chrX 137205635 137205722 -29444574 - B4A SINE B4 -125 167 82 4 1631 181 283 19 124 chrX 137206082 137206187 -29444109 - MIR3 SINE MIR -6 202 109 4 1631 349 291 87 0 chrX 137206706 137206809 -29443487 + PB1D10 SINE Alu 1 112 -5 4 1631 533 249 113 13 chrX 137207517 137207700 -29442596 + ID_B1 SINE B4 81 284 -8 4 1631 2746 244 40 26 chrX 137207779 137208582 -29441714 - L1MB7 LINE L1 -21 6163 5350 4 1631 330 265 36 67 chrX 137208589 137208709 -29441587 - L1MB7 LINE L1 -941 5205 5085 4 1631 228 35 0 0 chrX 137208709 137208738 -29441558 + (CAA)n Simple_repeat Simple_repeat 2 30 0 4 1631 330 265 36 67 chrX 137208738 137208811 -29441485 - L1MB7 LINE L1 -1062 5084 5018 4 1631 464 311 52 22 chrX 137208841 137208976 -29441320 - B1F1 SINE Alu -10 139 1 4 1631 456 264 40 30 chrX 137208984 137209183 -29441113 - L1MB7 LINE L1 -1159 4984 4784 4 1631 240 259 98 12 chrX 137209460 137209542 -29440754 + B4A SINE B4 84 172 -120 4 1631 249 310 58 39 chrX 137209675 137209779 -29440517 - Charlie4z DNA MER1_type -23 144 39 4 1631 411 284 164 28 chrX 137210236 137210450 -29439846 + MIRb SINE MIR 15 257 -11 4 1631 359 73 0 18 chrX 137212278 137212334 -29437962 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 4 1631 355 235 0 12 chrX 137213699 137213781 -29436515 + ID2 SINE ID 2 82 -1 4 1631 573 164 19 19 chrX 137214234 137214340 -29435956 + U6 snRNA snRNA 1 106 -1 4 1631 378 0 0 0 chrX 137215846 137215888 -29434408 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1631 232 241 0 33 chrX 137215913 137215973 -29434323 + GA-rich Low_complexity Low_complexity 3 60 0 4 1631 498 17 0 0 chrX 137216233 137216292 -29434004 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 1631 378 255 85 0 chrX 137217202 137217308 -29432988 - PB1D10 SINE Alu 0 117 3 4 1631 414 0 0 0 chrX 137217805 137217851 -29432445 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1631 216 297 0 0 chrX 137217893 137217957 -29432339 + L3b LINE CR1 3 66 -416 4 1631 580 263 7 21 chrX 137218892 137219023 -29431273 + ID_B1 SINE B4 79 210 -14 4 1631 198 0 0 0 chrX 137219023 137219045 -29431251 + (CAAA)n Simple_repeat Simple_repeat 4 25 0 4 1631 560 224 20 27 chrX 137219087 137219234 -29431062 + B1F2 SINE Alu 4 149 0 4 1631 264 323 79 64 chrX 137219653 137219855 -29430441 + L3b LINE CR1 61 265 -217 4 1631 315 319 65 52 chrX 137219861 137220074 -29430222 - L2c LINE L2 -1 3374 3187 4 1631 238 354 73 40 chrX 137220327 137220477 -29429819 - L2c LINE L2 -3 3384 3230 4 1631 278 194 0 15 chrX 137221415 137221483 -29428813 + GA-rich Low_complexity Low_complexity 2 68 0 4 1631 358 172 130 49 chrX 137221591 137221701 -29428595 - PB1D7 SINE Alu -30 119 20 4 1631 363 44 0 0 chrX 137221707 137221752 -29428544 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1631 218 241 17 0 chrX 137221759 137221817 -29428479 + (TA)n Simple_repeat Simple_repeat 2 60 0 4 1631 312 279 0 0 chrX 137221861 137221929 -29428367 - ID4 SINE ID -14 69 2 4 1631 207 0 0 0 chrX 137222465 137222488 -29427808 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 1631 582 321 0 0 chrX 137224752 137224889 -29425407 - B1_Mur1 SINE Alu -11 138 2 4 1631 193 300 0 0 chrX 137224905 137224955 -29425341 + L2b LINE L2 2951 3000 -387 4 1631 473 246 7 119 chrX 137224970 137225113 -29425183 - PB1 SINE Alu 0 127 1 4 1631 205 302 36 36 chrX 137225127 137225237 -29425059 + L2b LINE L2 3039 3148 -227 4 1631 1000 234 38 8 chrX 137225518 137225755 -29424541 - ORR1D2 LTR MaLR 0 370 127 4 1631 1544 158 142 16 chrX 137225759 137226075 -29424221 - ORR1B2 LTR MaLR -8 359 4 4 1631 359 238 208 9 chrX 137226075 137226181 -29424115 - ORR1D2 LTR MaLR -243 127 1 4 1631 793 174 246 6 chrX 137227159 137227338 -29422958 - ORR1B2 LTR MaLR -131 236 15 4 1631 226 330 190 0 chrX 137227339 137227439 -29422857 + ID_B1 SINE B4 30 148 -76 4 1631 235 263 224 0 chrX 137227386 137227462 -29422834 + B1F1 SINE Alu 14 106 -11 4 1631 5412 105 85 5 chrX 137228391 137229271 -29421025 - L1_Mus4 LINE L1 -1 6635 5685 4 1631 900 71 0 0 chrX 137229311 137229437 -29420859 - L1_Mus3 LINE L1 -507 6131 6006 4 1631 192 276 109 59 chrX 137229861 137230026 -29420270 + MIRc SINE MIR 4 177 -91 4 1631 1707 242 53 4 chrX 137230583 137231051 -29419245 - Lx6 LINE L1 -25 7435 6945 4 1632 257 410 43 20 chrX 137233766 137234020 -29416276 - L2c LINE L2 -49 3338 3079 4 1632 2048 81 0 7 chrX 137234269 137234555 -29415741 + Lx LINE L1 6362 6645 -9 4 1632 311 327 133 51 chrX 137234688 137235078 -29415218 - L2c LINE L2 -700 2719 2298 4 1632 187 339 187 16 chrX 137235536 137235659 -29414637 + MIRb SINE MIR 117 260 -8 4 1632 367 137 27 0 chrX 137235666 137235739 -29414557 + GA-rich Low_complexity Low_complexity 3 77 0 4 1632 2020 118 16 13 chrX 137236961 137237278 -29413018 - ORR1A3 LTR MaLR -8 318 1 4 1632 390 327 113 19 chrX 137237722 137237881 -29412415 - MIRb SINE MIR -89 179 6 5 1632 480 62 0 0 chrX 137238479 137238543 -29411753 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 1632 288 0 0 0 chrX 137238543 137238575 -29411721 + (GA)n Simple_repeat Simple_repeat 1 32 0 5 1632 550 241 50 28 chrX 137239727 137239868 -29410428 - B1F SINE Alu 0 149 6 5 1632 276 302 92 54 chrX 137239954 137240129 -29410167 - L2b LINE L2 -10 3416 3203 5 1632 542 267 56 6 chrX 137240165 137240327 -29409969 - MIR SINE MIR -3 259 90 5 1632 258 308 38 19 chrX 137240333 137240439 -29409857 - L2b LINE L2 -462 2957 2850 5 1632 362 250 15 0 chrX 137240550 137240618 -29409678 + ID4_ SINE ID 2 70 -13 5 1632 202 331 106 63 chrX 137240796 137241080 -29409216 - L2b LINE L2 -757 2662 2367 5 1632 761 211 10 122 chrX 137241151 137241356 -29408940 + B3A SINE B2 2 183 -15 5 1632 229 301 0 0 chrX 137241393 137241486 -29408810 + L1MB8 LINE L1 6074 6166 -12 5 1632 1445 101 9 0 chrX 137241942 137242161 -29408135 - L1_Mm LINE L1 -963 4920 4700 5 1632 2820 129 16 38 chrX 137242155 137242272 -29408024 + L1_Mm LINE L1 5246 5359 -524 5 1632 1090 88 7 0 chrX 137242272 137242419 -29407877 + B1_Mus1 SINE Alu 1 148 0 5 1632 2820 129 16 38 chrX 137242419 137242799 -29407497 + L1_Mm LINE L1 5360 5732 -151 5 1632 1711 163 12 89 chrX 137242799 137243280 -29407016 - RMER17C LTR ERVK -519 439 16 5 1632 6347 94 2 1 chrX 137243280 137244187 -29406109 + L1_Mus4 LINE L1 5729 6636 0 5 1632 423 184 0 0 chrX 137244682 137244769 -29405527 + CT-rich Low_complexity Low_complexity 2 88 0 5 1632 660 225 102 68 chrX 137244778 137244983 -29405313 - ID_B1 SINE B4 -11 213 2 5 1632 328 268 141 8 chrX 137245294 137245422 -29404874 + B1F1 SINE Alu 1 145 -4 5 1632 24 32 0 0 chrX 137245610 137245641 -29404655 + AT_rich Low_complexity Low_complexity 1 31 0 5 1632 276 100 0 0 chrX 137245685 137245725 -29404571 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1632 436 337 169 41 chrX 137245900 137246510 -29403786 - L1MD LINE L1 -1942 4204 3517 5 1632 21 0 0 0 chrX 137246558 137246579 -29403717 + AT_rich Low_complexity Low_complexity 1 21 0 5 1632 375 276 167 29 chrX 137246668 137246806 -29403490 + MER63A DNA AcHobo 1 157 -53 5 1632 303 49 0 0 chrX 137246873 137246914 -29403382 + (CCTG)n Simple_repeat Simple_repeat 2 42 0 5 1632 453 243 9 19 chrX 137246932 137247037 -29403259 - B1_Mur1 SINE Alu 0 149 46 5 1632 809 294 7 43 chrX 137247598 137247900 -29402396 - B4A SINE B4 0 292 2 5 1632 260 326 82 21 chrX 137248757 137248854 -29401442 - PB1D10 SINE Alu -10 107 5 5 1632 595 343 38 59 chrX 137250019 137250307 -29399989 + B4A SINE B4 3 284 -8 5 1632 1933 130 6 9 chrX 137250396 137250715 -29399581 - Lx LINE L1 -2 6652 6335 5 1632 380 293 70 30 chrX 137250921 137251124 -29399172 - MIRb SINE MIR -15 253 1 5 1632 211 289 19 0 chrX 137251347 137251399 -29398897 + B1_Mus1 SINE Alu 30 82 -66 5 1632 348 24 0 0 chrX 137251422 137251463 -29398833 + (GGGA)n Simple_repeat Simple_repeat 4 44 0 5 1632 297 0 0 0 chrX 137251890 137251923 -29398373 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1632 220 234 0 0 chrX 137251923 137251970 -29398326 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 1632 651 78 0 0 chrX 137252025 137252115 -29398181 + (TATATG)n Simple_repeat Simple_repeat 5 94 0 5 1632 414 0 0 0 chrX 137253455 137253501 -29396795 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1632 506 30 30 0 chrX 137253827 137253894 -29396402 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 5 1632 213 370 115 45 chrX 137254493 137254762 -29395534 + L2 LINE L2 2737 3024 -395 5 1632 202 351 52 21 chrX 137254712 137254808 -29395488 - L2c LINE L2 -1 3386 3288 5 1632 3241 248 59 24 chrX 137255049 137256463 -29393833 - Lx6 LINE L1 -26 7434 5751 5 1632 2776 179 7 58 chrX 137256464 137257063 -29393233 + Lx6 LINE L1 5182 5749 -131 5 1632 1047 239 116 3 chrX 137257425 137257735 -29392561 - MER2 DNA MER2_type 0 345 1 5 1632 344 312 53 23 chrX 137257791 137257922 -29392374 - L2a LINE L2 -1 3425 3291 5 1632 1149 48 14 0 chrX 137257936 137258081 -29392215 - B1_Mus1 SINE Alu 0 148 2 5 1632 938 233 48 10 chrX 137258467 137258675 -29391621 - B3 SINE B2 0 216 1 5 1632 412 282 54 35 chrX 137258712 137258973 -29391323 - L1MD2 LINE L1 -377 5982 5717 5 1632 401 19 38 0 chrX 137259285 137259338 -29390958 + (TATG)n Simple_repeat Simple_repeat 2 56 0 5 1632 207 0 0 0 chrX 137259375 137259398 -29390898 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1632 1257 34 0 0 chrX 137259400 137259548 -29390748 - B1_Mus1 SINE Alu 0 148 1 5 1632 5036 126 14 9 chrX 137259559 137260336 -29389960 - Lx4A LINE L1 -2 7056 6276 5 1632 1203 234 36 11 chrX 137260493 137260769 -29389527 + Lx5 LINE L1 6527 6809 -241 5 1632 387 41 0 0 chrX 137260770 137260819 -29389477 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 5 1632 2140 40 0 4 chrX 137260819 137261096 -29389200 - L1Md_F3 LINE L1 -33 6551 6276 5 1632 755 281 12 47 chrX 137261096 137261350 -29388946 + Lx5 LINE L1 6797 7041 -9 5 1632 378 143 0 0 chrX 137261699 137261762 -29388534 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 1632 458 318 77 9 chrX 137261762 137261984 -29388312 + MIR SINE MIR 10 246 -16 5 1632 249 40 19 57 chrX 137262160 137262213 -29388083 + (CAAA)n Simple_repeat Simple_repeat 3 53 0 5 1632 761 347 3 10 chrX 137263067 137263361 -29386935 - B4A SINE B4 0 292 1 5 1632 283 333 0 0 chrX 137263375 137263477 -29386819 - PB1D10 SINE Alu -11 106 5 5 1632 518 0 16 0 chrX 137263506 137263568 -29386728 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 1632 793 281 13 53 chrX 137263583 137263884 -29386412 - B4A SINE B4 -2 290 2 5 1632 441 336 75 34 chrX 137264038 137264075 -29386221 + L2c LINE L2 3058 3096 -291 5 1632 3252 14 0 0 chrX 137264075 137264443 -29385853 - L1Md_A LINE L1 0 6582 6215 5 1632 441 336 75 34 chrX 137264443 137264698 -29385598 + L2c LINE L2 3097 3362 -25 5 1632 1190 289 52 16 chrX 137265088 137265454 -29384842 + MTE2b LTR MaLR 1 379 0 5 1632 297 273 52 0 chrX 137265683 137265760 -29384536 + ID4_ SINE ID 1 81 -2 5 1632 357 24 0 0 chrX 137266568 137266610 -29383686 + (TATG)n Simple_repeat Simple_repeat 2 43 0 5 1632 239 343 78 0 chrX 137266622 137266724 -29383572 - MIRm SINE MIR -2 274 165 5 1632 612 228 154 0 chrX 137266756 137266905 -29383391 - MTEb LTR MaLR 0 379 208 5 1632 236 204 18 18 chrX 137267085 137267140 -29383156 - LTR9 LTR ERV1 -524 88 34 5 1632 575 289 51 18 chrX 137267163 137267352 -29382944 + B3A SINE B2 6 206 -10 5 1632 378 0 0 0 chrX 137267563 137267605 -29382691 + (TC)n Simple_repeat Simple_repeat 1 42 0 5 1632 243 0 0 0 chrX 137267605 137267631 -29382665 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 1632 905 169 251 0 chrX 137267949 137268192 -29382104 + Lx9 LINE L1 7162 7465 -179 5 1632 387 0 0 0 chrX 137268195 137268238 -29382058 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1632 497 129 56 8 chrX 137268241 137268366 -29381930 + Lx9 LINE L1 7513 7643 -1 5 1632 562 323 33 9 chrX 137269072 137269304 -29380992 + MIRb SINE MIR 17 261 -7 5 1632 371 235 143 34 chrX 137269680 137269799 -29380497 + B3A SINE B2 1 132 -66 5 1632 337 333 68 54 chrX 137269962 137270184 -29380112 + MIRb SINE MIR 37 261 -7 5 1632 408 40 0 0 chrX 137271307 137271357 -29378939 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1632 681 261 120 0 chrX 137271404 137271588 -29378708 - B3 SINE B2 -10 206 1 5 1632 753 12 0 0 chrX 137271943 137272029 -29378267 + (TC)n Simple_repeat Simple_repeat 1 86 0 5 1632 222 37 0 0 chrX 137272030 137272057 -29378239 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1632 896 104 44 22 chrX 137272057 137272194 -29378102 - B1_Mur3 SINE Alu -9 140 1 5 1632 411 113 0 0 chrX 137273447 137273509 -29376787 + (TC)n Simple_repeat Simple_repeat 2 63 0 5 1632 195 306 155 48 chrX 137273816 137273984 -29376312 + L2 LINE L2 712 897 -2522 5 1632 270 81 0 0 chrX 137273990 137274027 -29376269 + (CAT)n Simple_repeat Simple_repeat 2 38 0 5 1632 807 260 124 6 chrX 137274392 137274740 -29375556 - L1M2 LINE L1 -556 5741 5353 5 1632 981 251 9 39 chrX 137274812 137275044 -29375252 - B4 SINE B4 -4 288 64 5 1632 384 275 22 7 chrX 137275044 137275183 -29375113 - L1M2 LINE L1 -879 5264 5124 5 1632 756 263 21 48 chrX 137275199 137275513 -29374783 + L1M2 LINE L1 4676 4991 -856 5 1632 495 274 20 0 chrX 137275547 137275693 -29374603 - B1F SINE Alu 0 149 1 5 1632 1095 298 70 21 chrX 137275782 137276300 -29373996 - Lx8 LINE L1 -2 7471 6929 5 1632 521 245 0 9 chrX 137276394 137276505 -29373791 + Lx7 LINE L1 6306 6415 -1058 5 1632 635 290 19 62 chrX 137276509 137276817 -29373479 + Lx7 LINE L1 6558 6854 -619 5 1632 1095 87 0 0 chrX 137276967 137277105 -29373191 + B1_Mus2 SINE Alu 1 138 -9 5 1632 318 26 0 0 chrX 137277105 137277144 -29373152 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1632 201 39 0 0 chrX 137277247 137277273 -29373023 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 5 1632 1117 96 0 0 chrX 137277273 137277419 -29372877 - B1_Mus1 SINE Alu -2 146 1 5 1632 334 328 33 28 chrX 137277741 137277923 -29372373 - HAL1 LINE L1 -1691 816 634 5 1632 236 286 187 0 chrX 137278064 137278155 -29372141 - HAL1 LINE L1 -2053 454 347 5 1632 325 255 91 96 chrX 137278194 137278402 -29371894 - HAL1 LINE L1 -2294 213 7 5 1632 274 265 12 35 chrX 137278635 137278721 -29371575 + CT-rich Low_complexity Low_complexity 1 84 0 5 1632 2647 51 0 9 chrX 137279442 137279780 -29370516 - L1Md_F3 LINE L1 -1 6583 6249 5 1632 1147 56 0 0 chrX 137279780 137279918 -29370378 + L1Md_T LINE L1 5946 6083 -499 5 1632 456 19 0 0 chrX 137279968 137280021 -29370275 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1632 308 260 44 88 chrX 137280144 137280258 -29370038 + B3A SINE B2 10 118 -80 5 1632 304 372 33 13 chrX 137280258 137280294 -29370002 + B4A SINE B4 10 162 -130 5 1632 257 301 126 0 chrX 137280328 137280431 -29369865 - PB1D7 SINE Alu -4 116 1 5 1632 336 315 46 8 chrX 137280492 137280623 -29369673 - RSINE1 SINE B4 -19 146 11 6 1632 378 0 0 0 chrX 137280664 137280706 -29369590 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1632 794 183 28 0 chrX 137281687 137281829 -29368467 + B1_Mus2 SINE Alu 1 146 -1 6 1632 1258 57 101 17 chrX 137282248 137282426 -29367870 + B2_Mm2 SINE B2 2 194 -1 6 1632 455 274 24 0 chrX 137282450 137282574 -29367722 + ID_B1 SINE B4 98 224 0 6 1632 353 284 56 55 chrX 137282996 137283237 -29367059 + MIR SINE MIR 22 267 -1 6 1632 779 304 39 0 chrX 137283383 137283590 -29366706 + ID_B1 SINE B4 5 219 -5 6 1632 22 35 0 0 chrX 137283667 137283696 -29366600 + AT_rich Low_complexity Low_complexity 1 29 0 6 1632 235 257 171 0 chrX 137285213 137285283 -29365013 + ID4_ SINE ID 2 83 0 6 1632 681 13 0 0 chrX 137285852 137285930 -29364366 + (TC)n Simple_repeat Simple_repeat 1 78 0 6 1632 306 288 27 0 chrX 137286091 137286164 -29364132 + PB1D10 SINE Alu 1 75 -42 6 1632 288 77 0 0 chrX 137286172 137286211 -29364085 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1632 186 71 0 0 chrX 137286589 137286617 -29363679 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 6 1632 243 0 0 0 chrX 137286657 137286684 -29363612 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1632 183 281 0 34 chrX 137286959 137287018 -29363278 + L4 LINE RTE 676 732 -1297 6 1632 216 329 77 44 chrX 137287184 137287399 -29362897 - MIRb SINE MIR -31 237 16 6 1632 295 390 16 11 chrX 137287429 137287618 -29362678 - L3 LINE CR1 -295 4194 4005 6 1632 845 280 18 0 chrX 137287687 137287905 -29362391 - ID_B1 SINE B4 0 224 3 6 1632 202 297 68 0 chrX 137288146 137288220 -29362076 - L3 LINE CR1 -892 3597 3519 6 1632 601 222 32 2 chrX 137288242 137288380 -29361916 - B1_Mur1 SINE Alu -1 148 9 6 1632 1147 17 16 44 chrX 137288547 137288730 -29361566 + (TCTCCC)n Simple_repeat Simple_repeat 3 180 0 6 1632 420 259 34 25 chrX 137288772 137288891 -29361405 - PB1D9 SINE Alu 0 120 1 6 1632 1251 48 0 0 chrX 137289167 137289314 -29360982 - B1_Mus2 SINE Alu 0 147 1 6 1632 475 243 0 18 chrX 137289518 137289627 -29360669 + B4 SINE B4 152 258 -34 6 1632 348 64 0 0 chrX 137289627 137289674 -29360622 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1632 248 277 154 0 chrX 137289739 137289804 -29360492 - B3 SINE B2 -36 180 106 6 1632 389 298 101 6 chrX 137289813 137289972 -29360324 - Lx8 LINE L1 -331 7142 6969 6 1632 415 137 0 52 chrX 137290004 137290081 -29360215 + PB1D9 SINE Alu 46 118 -2 6 1632 396 287 20 0 chrX 137290290 137290391 -29359905 + PB1D10 SINE Alu 3 105 -12 6 1632 847 302 59 65 chrX 137290512 137291185 -29359111 - L1MC4 LINE L1 -599 7443 6775 6 1632 765 233 68 23 chrX 137291214 137291434 -29358862 - ORR1D2 LTR MaLR 0 370 141 6 1632 189 0 0 0 chrX 137291440 137291461 -29358835 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 6 1632 1118 70 0 0 chrX 137291461 137291617 -29358679 - B2_Mm2 SINE B2 -38 157 2 6 1632 332 200 0 0 chrX 137291640 137291700 -29358596 - ORR1D2 LTR MaLR -246 124 65 6 1632 1277 20 0 0 chrX 137291700 137291846 -29358450 + B1_Mm SINE Alu 1 146 -1 6 1632 193 89 44 0 chrX 137291848 137291893 -29358403 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 6 1632 471 105 13 0 chrX 137291893 137291969 -29358327 - ORR1D2 LTR MaLR -297 77 1 6 1632 857 239 15 5 chrX 137292026 137292232 -29358064 - MER2 DNA MER2_type -10 335 128 6 1632 382 262 36 0 chrX 137292223 137292307 -29357989 + B1F SINE Alu 54 140 -9 6 1632 1045 231 39 0 chrX 137292328 137292536 -29357760 + B3 SINE B2 1 216 0 6 1632 226 299 0 25 chrX 137292538 137292617 -29357679 - MER2 DNA MER2_type -268 77 1 6 1632 829 269 48 26 chrX 137292640 137292682 -29357614 - RMER15 LTR ERVL 0 575 533 6 1632 180 77 0 0 chrX 137292682 137292708 -29357588 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1632 829 269 48 26 chrX 137292708 137292936 -29357360 - RMER15 LTR ERVL -43 532 299 6 1632 294 267 134 20 chrX 137293171 137293320 -29356976 - L1MC4 LINE L1 -1457 6585 6420 6 1632 297 267 128 10 chrX 137293773 137293875 -29356421 - L1MC4 LINE L1 -1976 5906 5793 6 1632 233 296 93 36 chrX 137294245 137294385 -29355911 + YREP_Mm Unknown Unknown 149 296 -1516 6 1632 497 267 0 8 chrX 137294289 137294410 -29355886 - ID_B1 SINE B4 -28 196 77 6 1632 207 45 0 83 chrX 137294926 137294974 -29355322 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 6 1632 369 0 0 0 chrX 137295145 137295186 -29355110 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1632 204 232 176 29 chrX 137295243 137295345 -29354951 + MIR3 SINE MIR 85 201 -7 6 1632 414 314 47 50 chrX 137299243 137299541 -29350755 - MamRep434 DNA TcMar -31 395 99 6 1632 311 230 125 31 chrX 137300168 137300330 -29349966 + MIRb SINE MIR 61 243 -25 6 1632 180 365 57 9 chrX 137300635 137300740 -29349556 + MER5A DNA MER1_type 71 180 -9 6 1632 277 322 66 0 chrX 137300754 137300875 -29349421 + L2a LINE L2 3298 3426 0 6 1632 2272 44 69 3 chrX 137303009 137303326 -29346970 - ORR1A1 LTR MaLR -8 338 1 6 1632 566 102 31 0 chrX 137303782 137303880 -29346416 + RMER19A LTR ERVK 637 737 0 6 1632 827 132 0 0 chrX 137303905 137304034 -29346262 - B2_Mm2 SINE B2 -65 130 2 6 1632 1061 281 63 26 chrX 137304142 137304234 -29346062 + MTE2b LTR MaLR 12 111 -268 6 1632 4686 142 108 22 chrX 137304234 137305064 -29345232 - RMER19B LTR ERVK 0 902 1 6 1632 1061 281 63 26 chrX 137305064 137305322 -29344974 + MTE2b LTR MaLR 112 375 -4 6 1632 400 263 101 0 chrX 137305411 137305510 -29344786 + ID_B1 SINE B4 82 190 -34 6 1632 905 333 114 25 chrX 137305838 137306347 -29343949 - LTR75 LTR ERVL 0 562 9 6 1632 411 22 0 0 chrX 137306386 137306431 -29343865 + L1Md_F2 LINE L1 5542 5586 -297 6 1632 8239 40 1 3 chrX 137306431 137307414 -29342882 + L1Md_F2 LINE L1 5587 6567 -15 6 1632 594 262 41 6 chrX 137307659 137307674 -29342622 - B3A SINE B2 -20 178 164 6 1632 657 69 0 0 chrX 137307674 137307761 -29342535 + (GGGA)n Simple_repeat Simple_repeat 3 89 0 6 1632 594 262 41 6 chrX 137307761 137307914 -29342382 - B3A SINE B2 -35 163 4 6 1632 270 0 0 0 chrX 137307949 137307979 -29342317 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1632 610 266 0 40 chrX 137307987 137308136 -29342160 - RSINE1 SINE B4 -21 144 2 6 1632 342 271 82 27 chrX 137308144 137308254 -29342042 - PB1D10 SINE Alu -4 116 1 6 1632 350 252 74 9 chrX 137308543 137308651 -29341645 - PB1D10 SINE Alu -2 115 1 6 1632 291 54 0 0 chrX 137308975 137309012 -29341284 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 6 1632 238 383 0 9 chrX 137309148 137309264 -29341032 - MIRb SINE MIR 0 268 154 6 1632 4048 128 12 34 chrX 137309450 137309600 -29340696 + Lx4A LINE L1 6419 6571 -487 6 1632 2312 117 134 64 chrX 137309600 137310085 -29340211 - MURVY-LTR LTR ERV1 0 519 1 6 1632 4048 128 12 34 chrX 137310085 137310587 -29339709 + Lx4A LINE L1 6572 7057 -1 6 1632 47 0 0 0 chrX 137311347 137311394 -29338902 + AT_rich Low_complexity Low_complexity 1 47 0 6 1632 1667 138 91 30 chrX 137311396 137311726 -29338570 - Lx LINE L1 -6 6648 6299 6 1632 1209 61 0 0 chrX 137311821 137311969 -29338327 + B1_Mus1 SINE Alu 1 148 0 6 1632 306 0 0 0 chrX 137312090 137312124 -29338172 + (TC)n Simple_repeat Simple_repeat 2 35 0 6 1632 270 0 0 0 chrX 137312124 137312153 -29338143 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1632 380 260 28 19 chrX 137312474 137312580 -29337716 + PB1D10 SINE Alu 2 108 -9 6 1632 620 237 29 0 chrX 137312723 137312862 -29337434 + B1F2 SINE Alu 2 144 -5 6 1632 467 229 31 0 chrX 137312921 137313017 -29337279 + PB1D10 SINE Alu 14 112 -5 6 1632 312 251 65 121 chrX 137313062 137313261 -29337035 - MT2A LTR ERVL -2 531 344 6 1632 1639 190 105 24 chrX 137313386 137313443 -29336853 - MTC LTR MaLR -8 413 358 6 1632 2150 115 12 58 chrX 137313443 137313786 -29336510 + ORR1A2 LTR MaLR 1 327 0 6 1632 1639 190 105 24 chrX 137313786 137314110 -29336186 - MTC LTR MaLR -64 357 1 6 1632 274 247 20 61 chrX 137314235 137314334 -29335962 - MTD LTR MaLR -318 101 7 6 1632 5615 135 22 29 chrX 137314629 137315536 -29334760 + RMER19B LTR ERVK 2 902 0 6 1632 1357 179 0 0 chrX 137315611 137315835 -29334461 + URR1B DNA MER1_type 2 225 0 6 1632 204 40 0 0 chrX 137316284 137316309 -29333987 + (TG)n Simple_repeat Simple_repeat 1 25 0 6 1632 335 320 29 10 chrX 137316309 137316413 -29333883 - RSINE1 SINE B4 -24 141 36 6 1632 411 21 0 0 chrX 137316452 137316500 -29333796 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1632 4703 90 13 0 chrX 137316558 137317183 -29333113 + L1_Mm LINE L1 5106 5738 -145 6 1632 2816 94 45 21 chrX 137317182 137317791 -29332505 - L1VL4 LINE L1 -1725 2189 1724 6 1632 3374 158 35 19 chrX 137317791 137318423 -29331873 + RLTR26 LTR ERVK 1 642 0 6 1632 593 65 0 21 chrX 137318423 137318518 -29331778 - L1VL4 LINE L1 -2185 1729 1637 6 1632 8116 33 5 2 chrX 137318522 137319482 -29330814 - L1Md_F2 LINE L1 -4 6578 5616 6 1632 5861 90 17 2 chrX 137319477 137320580 -29329716 - L1VL4 LINE L1 -2253 1661 543 6 1632 244 315 0 0 chrX 137320581 137320656 -29329640 - B1F2 SINE Alu -41 76 2 6 1632 438 209 139 28 chrX 137320927 137321035 -29329261 - B1F1 SINE Alu 0 149 1 6 1632 459 259 76 35 chrX 137321307 137321451 -29328845 - Lx5 LINE L1 0 7050 6901 6 1632 273 118 0 0 chrX 137321528 137321579 -29328717 + (TC)n Simple_repeat Simple_repeat 2 52 0 6 1632 678 311 30 60 chrX 137321590 137321891 -29328405 - B4A SINE B4 0 292 1 6 1632 29 0 0 0 chrX 137321972 137322001 -29328295 + AT_rich Low_complexity Low_complexity 1 29 0 6 1632 21 0 0 0 chrX 137322151 137322172 -29328124 + AT_rich Low_complexity Low_complexity 1 21 0 6 1632 1164 62 7 0 chrX 137322193 137322338 -29327958 - B1_Mus2 SINE Alu 0 147 2 6 1632 1258 178 0 14 chrX 137322431 137322647 -29327649 - B3 SINE B2 -3 213 1 6 1632 22 56 0 0 chrX 137323236 137323272 -29327024 + AT_rich Low_complexity Low_complexity 1 36 0 6 1632 3763 40 9 0 chrX 137323329 137323775 -29326521 - L1Md_T LINE L1 0 6582 6133 6 1632 342 213 94 21 chrX 137323966 137324062 -29326234 - MurSatRep1 Unknown Unknown -1862 275 173 6 1632 3545 144 103 71 chrX 137324066 137324890 -29325406 - RMER19B LTR ERVK 0 902 19 6 1632 312 83 0 0 chrX 137324890 137324938 -29325358 + (GA)n Simple_repeat Simple_repeat 1 48 0 7 1632 1099 89 7 0 chrX 137325004 137325150 -29325146 + B1_Mm SINE Alu 1 147 0 7 1632 297 242 131 46 chrX 137325183 137325313 -29324983 - L1M5 LINE L1 -2425 3721 3581 7 1632 677 223 8 0 chrX 137325666 137325796 -29324500 + B1_Mus1 SINE Alu 2 132 -16 7 1632 234 0 0 0 chrX 137325797 137325823 -29324473 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 1632 741 257 33 5 chrX 137325841 137326025 -29324271 + B3 SINE B2 4 192 -24 7 1632 449 34 17 0 chrX 137326026 137326085 -29324211 + (TA)n Simple_repeat Simple_repeat 1 60 0 7 1632 193 246 35 0 chrX 137326581 137326638 -29323658 - MIRb SINE MIR -34 234 176 7 1632 1438 156 70 96 chrX 137326806 137327161 -29323135 + ORR1B1 LTR MaLR 41 386 -8 7 1632 786 82 20 0 chrX 137327167 137327313 -29322983 + RMER17B LTR ERVK 313 461 -497 7 1632 322 286 38 9 chrX 137327355 137327461 -29322835 - MER5B DNA MER1_type -5 173 65 7 1632 1107 264 128 26 chrX 137327472 137327861 -29322435 - RLTR26 LTR ERVK -213 429 1 7 1632 925 40 0 8 chrX 137328093 137328220 -29322076 + B1_Mus2 SINE Alu 1 126 -21 7 1632 1640 246 135 89 chrX 137328219 137329079 -29321217 - RMER13B LTR ERVK -9 899 1 7 1632 2788 163 11 58 chrX 137329473 137330028 -29320268 + MT2A LTR ERVL 1 529 -4 7 1632 252 185 0 0 chrX 137330166 137330220 -29320076 + CT-rich Low_complexity Low_complexity 3 56 0 7 1632 746 97 9 0 chrX 137330230 137330343 -29319953 + (TTTC)n Simple_repeat Simple_repeat 4 117 0 7 1632 501 244 0 25 chrX 137330369 137330487 -29319809 - PB1D9 SINE Alu -5 115 1 7 1632 201 74 0 0 chrX 137330936 137330963 -29319333 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1632 740 280 108 39 chrX 137331131 137331429 -29318867 + ORR1E LTR MaLR 1 339 -40 7 1632 397 342 5 87 chrX 137331437 137331645 -29318651 + MTEa LTR MaLR 31 221 -158 7 1632 193 0 61 30 chrX 137334741 137334774 -29315522 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 1632 326 207 63 84 chrX 137335144 137335239 -29315057 + RLTR25B LTR ERVK 417 509 -519 7 1632 851 46 0 0 chrX 137335174 137335282 -29315014 + B1_Mus2 SINE Alu 40 147 0 7 1632 459 118 0 0 chrX 137335282 137335367 -29314929 + (A)n Simple_repeat Simple_repeat 1 85 0 7 1632 1376 251 55 25 chrX 137335583 137335947 -29314349 - MTE2b LTR MaLR -4 375 1 7 1632 218 306 80 20 chrX 137335976 137336076 -29314220 - B1F1 SINE Alu -32 117 12 7 1632 634 304 11 11 chrX 137335989 137336172 -29314124 - B4A SINE B4 -109 183 1 7 1632 1831 288 34 74 chrX 137336172 137336406 -29313890 - MTC-int LTR MaLR -34 1546 1328 7 1632 1182 50 0 0 chrX 137336406 137336545 -29313751 + B1_Mus2 SINE Alu 5 143 -4 7 1632 252 0 0 0 chrX 137336545 137336573 -29313723 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 1632 1831 249 31 63 chrX 137336573 137337045 -29313251 - MTC-int LTR MaLR -253 1327 997 7 1632 2208 151 15 28 chrX 137337045 137337439 -29312857 + ORR1B1 LTR MaLR 3 391 -3 7 1632 1528 178 24 45 chrX 137337439 137337557 -29312739 - MTC LTR MaLR -235 186 74 7 1632 1433 157 73 18 chrX 137337613 137337885 -29312411 - Lx5 LINE L1 -4 7046 6760 7 1632 380 211 0 0 chrX 137337892 137337963 -29312333 - MTC LTR MaLR -350 71 1 7 1632 1128 295 25 34 chrX 137338571 137338925 -29311371 - RMER15-int LTR ERVL -3416 1583 1233 7 1632 453 19 0 0 chrX 137339123 137339177 -29311119 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 1632 570 289 7 29 chrX 137339244 137339383 -29310913 + B4A SINE B4 84 219 -73 7 1632 724 212 97 10 chrX 137339398 137339593 -29310703 + B3 SINE B2 5 216 0 7 1632 2885 192 112 172 chrX 137339645 137340766 -29309530 + RMER1B Other Other 3 1055 -11 7 1632 180 314 75 75 chrX 137341020 137341113 -29309183 + MIRc SINE MIR 57 149 -119 7 1632 3960 200 20 94 chrX 137341343 137342317 -29307979 - RMER13B LTR ERVK -1 907 6 7 1632 4235 21 4 6 chrX 137342862 137343377 -29306919 - RLTR44-int LTR ERVK -810 2002 1489 7 1632 911 170 147 20 chrX 137343483 137343681 -29306615 + URR1B DNA MER1_type 3 225 0 7 1632 372 177 24 48 chrX 137343910 137343993 -29306303 + MER20 DNA MER1_type 139 219 0 7 1632 496 208 134 10 chrX 137344962 137345059 -29305237 + ID_B1 SINE B4 103 211 -13 7 1632 915 42 0 8 chrX 137345226 137345347 -29304949 + B1_Mus2 SINE Alu 27 146 -1 7 1632 276 182 0 0 chrX 137345348 137345436 -29304860 + A-rich Low_complexity Low_complexity 1 88 0 7 1632 363 194 0 0 chrX 137346632 137346725 -29303571 + (CAG)n Simple_repeat Simple_repeat 1 93 0 7 1632 201 213 20 60 chrX 137346821 137346921 -29303375 + (GGGTG)n Simple_repeat Simple_repeat 1 96 0 7 1632 331 185 56 56 chrX 137346879 137347119 -29303177 + (TTGGGG)n Simple_repeat Simple_repeat 1 240 0 7 1632 397 312 49 81 chrX 137348646 137348869 -29301427 + B3 SINE B2 1 216 0 7 1632 283 261 0 69 chrX 137349003 137349048 -29301248 + ORR1B1-int LTR MaLR 614 648 -861 7 1632 739 198 0 0 chrX 137349048 137349174 -29301122 + B1_Mus2 SINE Alu 2 127 -20 7 1632 369 0 0 0 chrX 137349184 137349225 -29301071 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 1632 1456 182 51 42 chrX 137349326 137349658 -29300638 - Lx4A LINE L1 0 7058 6724 7 1632 264 30 0 0 chrX 137349773 137349806 -29300490 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 1632 372 22 0 0 chrX 137349806 137349850 -29300446 + (GA)n Simple_repeat Simple_repeat 1 45 0 7 1632 687 188 7 86 chrX 137349859 137349999 -29300297 - B1_Mur1 SINE Alu -20 129 1 7 1632 592 57 0 33 chrX 137350018 137350109 -29300187 + (TTTC)n Simple_repeat Simple_repeat 3 90 0 7 1632 956 66 0 0 chrX 137350109 137350231 -29300065 - B1_Mm SINE Alu 0 147 26 7 1632 336 302 130 105 chrX 137350286 137350571 -29299725 + B4A SINE B4 1 292 0 7 1632 364 202 73 21 chrX 137350822 137350918 -29299378 - L1MCa LINE L1 -4518 1990 1890 7 1632 297 0 0 0 chrX 137350929 137350962 -29299334 + (TA)n Simple_repeat Simple_repeat 1 33 0 7 1632 455 260 104 85 chrX 137350974 137351244 -29299052 - L1MA5A LINE L1 -469 5828 5554 7 1632 1491 301 104 26 chrX 137351280 137351721 -29298575 - L1MA5A LINE L1 -471 5406 4925 7 1632 195 42 0 0 chrX 137351721 137351745 -29298551 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 7 1632 1491 292 103 27 chrX 137351745 137352390 -29297906 - L1MA5A LINE L1 -1193 4950 4253 7 1632 2691 245 136 13 chrX 137352386 137353731 -29296565 - RMER1B Other Other -5 1061 1 7 1632 1102 279 153 9 chrX 137353957 137354283 -29296013 - MTEa LTR MaLR -6 373 1 7 1632 568 292 146 13 chrX 137354303 137354605 -29295691 - L1MA5A LINE L1 -1924 4219 3878 7 1632 208 108 54 0 chrX 137354646 137354683 -29295613 + T-rich Low_complexity Low_complexity 3 41 0 7 1632 4552 87 17 6 chrX 137354695 137355331 -29294965 - L1_Mus4 LINE L1 -6 6630 5988 7 1632 1227 186 0 71 chrX 137355335 137355590 -29294706 - L1VL4 LINE L1 -6037 265 29 7 1632 379 251 191 91 chrX 137355675 137356257 -29294039 - L1MA5A LINE L1 -3232 2911 2272 7 1632 342 0 0 0 chrX 137356280 137356318 -29293978 + (CTG)n Simple_repeat Simple_repeat 1 38 0 7 1632 752 62 0 26 chrX 137356318 137356434 -29293862 + (TTCTCC)n Simple_repeat Simple_repeat 3 115 0 7 1632 311 309 24 24 chrX 137357120 137357246 -29293050 - L1_Rod LINE L1 -3609 2238 2113 7 1632 33 43 0 0 chrX 137357268 137357315 -29292981 + AT_rich Low_complexity Low_complexity 1 47 0 7 1632 907 227 19 15 chrX 137357315 137357521 -29292775 - B3 SINE B2 -9 207 1 7 1632 192 40 0 0 chrX 137357589 137357614 -29292682 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 7 1632 225 203 0 0 chrX 137357917 137357941 -29292355 + T-rich Low_complexity Low_complexity 41 64 0 7 1632 1146 62 0 7 chrX 137357941 137358087 -29292209 - B1_Mus2 SINE Alu 0 147 3 7 1632 225 203 0 0 chrX 137358087 137358126 -29292170 + T-rich Low_complexity Low_complexity 2 40 0 7 1632 867 78 0 0 chrX 137358126 137358242 -29292054 - B1_Mus1 SINE Alu 0 148 33 7 1632 4974 44 0 3 chrX 137358247 137358843 -29291453 - L1Md_F2 LINE L1 -2 6580 5987 7 1632 309 242 74 99 chrX 137359029 137359101 -29291195 + L1MEg LINE L1 1752 1819 -4265 7 1632 1352 191 115 86 chrX 137359101 137359474 -29290822 - ORR1C2 LTR MaLR 0 384 1 7 1632 309 242 74 99 chrX 137359474 137359603 -29290693 + L1MEg LINE L1 1820 1948 -4136 7 1632 1904 150 67 9 chrX 137359679 137360031 -29290265 - MTC LTR MaLR -6 394 1 7 1632 319 311 186 5 chrX 137360031 137360225 -29290071 + MIRb SINE MIR 26 254 -14 7 1632 2638 157 31 7 chrX 137360371 137360819 -29289477 + RMER19B LTR ERVK 444 902 0 7 1632 5068 166 65 23 chrX 137360886 137362180 -29288116 - Lx2A LINE L1 -1442 6254 4876 7 1632 278 267 17 0 chrX 137362332 137362448 -29287848 + T-rich Low_complexity Low_complexity 3 120 0 7 1632 2654 204 127 43 chrX 137362503 137363183 -29287113 - RMER19A LTR ERVK 0 737 1 7 1632 30 45 0 0 chrX 137363205 137363249 -29287047 + AT_rich Low_complexity Low_complexity 1 44 0 7 1633 594 0 0 0 chrX 137364090 137364156 -29286140 + (TC)n Simple_repeat Simple_repeat 1 66 0 7 1633 5759 152 31 4 chrX 137364157 137365098 -29285198 - Lx LINE L1 -16 6638 5706 7 1633 289 361 20 10 chrX 137365428 137365526 -29284770 - B1F2 SINE Alu -48 101 3 7 1633 338 295 73 63 chrX 137365971 137366166 -29284130 + MIRc SINE MIR 47 240 -22 7 1633 924 48 16 0 chrX 137366783 137366907 -29283389 - L1Md_F2 LINE L1 -12 6570 6445 7 1633 240 297 80 90 chrX 137367560 137367578 -29282718 + MT2B2 LTR ERVL 143 159 -425 7 1633 495 280 9 0 chrX 137367578 137367685 -29282611 + PB1D10 SINE Alu 1 108 -9 7 1633 433 287 219 31 chrX 137367705 137367993 -29282303 + Lx8 LINE L1 7132 7473 0 7 1633 441 0 0 0 chrX 137368860 137368909 -29281387 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1633 947 252 42 68 chrX 137368934 137369158 -29281138 - L1_Mur3 LINE L1 -2033 3847 3644 7 1633 378 0 0 0 chrX 137369158 137369200 -29281096 + (TGG)n Simple_repeat Simple_repeat 3 44 0 7 1633 947 252 42 68 chrX 137369200 137369384 -29280912 - L1_Mur3 LINE L1 -2237 3643 3450 7 1633 2502 217 36 33 chrX 137369391 137370035 -29280261 - L1_Rod LINE L1 -3005 2842 2197 8 1633 3808 183 136 8 chrX 137370035 137370828 -29279468 - RMER19B LTR ERVK -7 895 1 8 1633 1533 91 91 49 chrX 137370863 137371072 -29279224 - Lx4A LINE L1 -20 7038 6818 8 1633 3871 188 127 21 chrX 137371072 137371938 -29278358 - RMER17B LTR ERVK 0 958 1 8 1633 1533 91 91 49 chrX 137371938 137371993 -29278303 - Lx4A LINE L1 -241 6817 6763 8 1633 728 257 1 9 chrX 137371993 137372183 -29278113 - RMER19B LTR ERVK -566 171 1 8 1633 467 316 17 55 chrX 137372752 137372933 -29277363 - B3A SINE B2 -11 187 14 8 1633 218 184 0 210 chrX 137378265 137378288 -29272008 + B3A SINE B2 15 36 -162 8 1633 3383 50 9 0 chrX 137378288 137378708 -29271588 + L1_Mus1 LINE L1 6144 6567 0 8 1633 218 184 0 210 chrX 137378708 137378746 -29271550 + B3A SINE B2 37 63 -135 8 1633 313 301 57 0 chrX 137378746 137378869 -29271427 + MusHAL1 LINE L1 1466 1595 -1117 8 1633 1734 239 81 3 chrX 137378871 137379252 -29271044 + MTD LTR MaLR 1 411 -8 8 1633 610 320 95 11 chrX 137379328 137379802 -29270494 + L1_Mur3 LINE L1 2913 3426 -2454 8 1633 1198 74 0 0 chrX 137379836 137379984 -29270312 + B1_Mus1 SINE Alu 1 148 0 8 1633 1006 135 24 25 chrX 137380018 137380203 -29270093 + B2_Mm2 SINE B2 2 185 -8 8 1633 3311 183 66 25 chrX 137380203 137380911 -29269385 + RMER19A LTR ERVK 1 737 0 8 1633 506 282 24 152 chrX 137380920 137381209 -29269087 + L1M2 LINE L1 3515 3766 -2377 8 1633 2025 115 72 0 chrX 137381209 137381513 -29268783 - ORR1A2 LTR MaLR -1 326 1 8 1633 229 184 20 0 chrX 137381748 137381797 -29268499 + L1_Rod LINE L1 3831 3880 -1967 8 1633 490 309 111 7 chrX 137381801 137382081 -29268215 + L1M2 LINE L1 3974 4282 -1861 8 1633 1185 41 0 0 chrX 137382098 137382243 -29268053 - B1_Mm SINE Alu 0 147 3 8 1633 484 262 6 92 chrX 137382243 137382289 -29268007 - MT2B LTR ERVL -443 158 127 8 1633 437 176 54 21 chrX 137382304 137382397 -29267899 - B1_Mus1 SINE Alu -52 96 1 8 1633 762 303 103 11 chrX 137382400 137383331 -29266965 + L1ME2 LINE L1 4546 5550 -612 8 1633 367 279 0 44 chrX 137383401 137383491 -29266805 - RSINE1 SINE B4 -70 95 10 8 1633 414 248 44 79 chrX 137383494 137383568 -29266728 - PB1D10 SINE Alu -2 115 42 8 1633 4292 108 135 1 chrX 137383568 137384218 -29266078 - RMER19A LTR ERVK 0 737 1 8 1633 414 248 44 79 chrX 137384218 137384257 -29266039 - PB1D10 SINE Alu -76 41 6 8 1633 537 317 131 21 chrX 137384257 137384776 -29265520 + L1ME2 LINE L1 5587 6162 -17 8 1633 636 274 15 64 chrX 137384836 137385039 -29265257 - B3A SINE B2 -5 193 1 8 1633 291 54 0 0 chrX 137385157 137385194 -29265102 + (T)n Simple_repeat Simple_repeat 1 37 0 8 1633 620 297 0 0 chrX 137385194 137385342 -29264954 + B1F2 SINE Alu 2 149 0 8 1633 358 267 79 107 chrX 137385506 137385758 -29264538 + MER63B DNA AcHobo 1 245 -191 8 1633 328 321 61 43 chrX 137385817 137386004 -29264292 - B4A SINE B4 -29 195 1 8 1633 290 333 9 37 chrX 137386018 137386127 -29264169 + MER63B DNA AcHobo 298 403 -33 8 1633 198 0 0 0 chrX 137386138 137386160 -29264136 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 8 1633 744 42 0 40 chrX 137386160 137386259 -29264037 - B1_Mus2 SINE Alu -11 136 42 8 1633 343 116 0 104 chrX 137386262 137386377 -29263919 + C-rich Low_complexity Low_complexity 6 108 0 8 1633 262 176 0 63 chrX 137386377 137386456 -29263840 - ID_B1 SINE B4 -67 157 84 8 1633 352 56 0 36 chrX 137386401 137386457 -29263839 - B1_Mus2 SINE Alu -92 55 2 8 1633 1726 213 139 82 chrX 137386572 137387386 -29262910 + RMER17B LTR ERVK 1 904 -4 8 1633 999 277 47 18 chrX 137387397 137387673 -29262623 + RCHARR1 DNA MER1_type 6 289 -685 8 1633 742 263 34 6 chrX 137387697 137387873 -29262423 - RMER12 LTR ERVK 0 1322 1142 8 1633 1498 215 196 67 chrX 137388028 137388537 -29261759 - RMER12 LTR ERVK -86 1236 662 8 1633 917 192 48 68 chrX 137388537 137388744 -29261552 + Lx2B LINE L1 6669 6871 -129 8 1633 2871 167 70 16 chrX 137388744 137389359 -29260937 - RMER12 LTR ERVK -674 648 1 8 1633 302 152 0 17 chrX 137389781 137389809 -29260487 + polypyrimidine Low_complexity Low_complexity 33 60 0 8 1633 1035 152 0 0 chrX 137389809 137389987 -29260309 + CT-rich Low_complexity Low_complexity 1 178 0 8 1633 302 152 0 17 chrX 137389987 137390018 -29260278 + polypyrimidine Low_complexity Low_complexity 2 32 0 8 1633 6087 82 41 15 chrX 137390019 137390890 -29259406 - Lx3_Mus LINE L1 -25 6984 6091 8 1633 3886 89 27 23 chrX 137390956 137391519 -29258777 + RMER2 LTR ERV1 3 567 0 8 1633 424 340 65 39 chrX 137392587 137393000 -29257296 + MuRRS4-int LTR ERV1 1301 1724 -3339 8 1633 291 214 33 67 chrX 137393120 137393210 -29257086 + MuRRS4-int LTR ERV1 1939 2025 -2665 8 1633 426 361 48 0 chrX 137393621 137393851 -29256445 + RLTR4_MM-int LTR ERV1 4005 4245 -3356 8 1633 1274 301 67 34 chrX 137394207 137394730 -29255566 + MuRRS4-int LTR ERV1 3470 4009 -1054 8 1633 1135 52 0 0 chrX 137394940 137395093 -29255203 + RMER2 LTR ERV1 1 153 -414 8 1633 333 275 74 56 chrX 137395303 137395465 -29254831 - RNERVK23-int LTR ERVK -2797 5420 5256 8 1633 3440 41 2 14 chrX 137395623 137396047 -29254249 + L1Md_F2 LINE L1 6163 6581 -1 8 1633 1833 85 16 12 chrX 137396219 137396470 -29253826 - L1_Mus2 LINE L1 -194 6372 6121 8 1633 892 79 7 48 chrX 137396471 137396617 -29253679 + L1_Mus2 LINE L1 6427 6566 0 8 1633 254 219 47 0 chrX 137396704 137396768 -29253528 - IAP-d-int LTR ERVK -4575 1967 1901 8 1633 1050 225 14 5 chrX 137399099 137399313 -29250983 - B3 SINE B2 0 216 1 8 1633 4280 57 2 24 chrX 137399614 137400157 -29250139 + L1_Mus1 LINE L1 6037 6567 0 8 1633 235 323 92 20 chrX 137400238 137400336 -29249960 - MIRb SINE MIR -138 130 26 8 1633 195 345 35 26 chrX 137400405 137400521 -29249775 - L2c LINE L2 -2 3385 3269 8 1633 181 313 75 0 chrX 137400582 137400649 -29249647 - MIR SINE MIR -1 261 190 8 1633 7013 133 44 3 chrX 137401207 137403067 -29247229 + Lx2 LINE L1 4990 7000 0 8 1633 1420 213 23 10 chrX 137403378 137403681 -29246615 - Lx7 LINE L1 -506 7190 6884 8 1633 213 365 32 91 chrX 137404073 137404281 -29246015 - L2 LINE L2 -2540 879 671 8 1633 4638 55 8 41 chrX 137404281 137404892 -29245404 + L1_Mus2 LINE L1 5976 6566 0 8 1633 213 365 32 91 chrX 137404892 137405057 -29245239 - L2 LINE L2 -2749 670 528 8 1633 586 239 42 14 chrX 137405596 137405740 -29244556 + B1F1 SINE Alu 1 148 -1 8 1633 528 160 0 0 chrX 137406304 137406404 -29243892 + (CA)n Simple_repeat Simple_repeat 1 100 0 8 1633 558 0 0 0 chrX 137406407 137406469 -29243827 + (GA)n Simple_repeat Simple_repeat 1 62 0 8 1633 227 297 0 26 chrX 137406617 137406693 -29243603 + GA-rich Low_complexity Low_complexity 3 76 0 8 1633 798 164 218 11 chrX 137406820 137406999 -29243297 - B3 SINE B2 0 216 1 8 1633 10083 100 19 14 chrX 137407213 137407968 -29242328 + Lx4A LINE L1 5473 6235 -823 8 1633 459 0 0 0 chrX 137407968 137408019 -29242277 + (TG)n Simple_repeat Simple_repeat 1 51 0 8 1633 414 0 0 0 chrX 137408019 137408064 -29242232 + (GA)n Simple_repeat Simple_repeat 1 46 0 8 1633 10083 98 21 16 chrX 137408064 137408084 -29242212 + Lx4A LINE L1 6236 6254 -804 8 1633 4194 167 105 31 chrX 137408084 137408924 -29241372 + RMER19B LTR ERVK 1 902 0 8 1633 10083 98 21 16 chrX 137408924 137409188 -29241108 + Lx4A LINE L1 6255 6520 -538 8 1633 2813 167 224 120 chrX 137409188 137410005 -29240291 - RMER19B LTR ERVK 0 902 1 8 1633 10083 98 21 16 chrX 137410005 137410535 -29239761 + Lx4A LINE L1 6521 7056 -2 8 1633 245 220 85 0 chrX 137410557 137410616 -29239680 + L1MC1 LINE L1 6270 6333 0 8 1633 1319 31 0 0 chrX 137410980 137411143 -29239153 - L1Md_F3 LINE L1 -14 6570 6408 8 1633 314 229 0 0 chrX 137411179 137411249 -29239047 + Lx6 LINE L1 7364 7433 -27 8 1633 353 22 0 21 chrX 137411384 137411431 -29238865 + (GAAAA)n Simple_repeat Simple_repeat 2 47 0 8 1633 3370 143 24 7 chrX 137411436 137411980 -29238316 + Lx7 LINE L1 6796 7348 -348 8 1633 339 179 0 0 chrX 137411986 137412053 -29238243 + CT-rich Low_complexity Low_complexity 3 69 0 8 1633 1300 217 18 28 chrX 137412114 137412441 -29237855 + Lx7 LINE L1 7357 7680 -16 8 1633 275 175 79 0 chrX 137412447 137412510 -29237786 - L1M2 LINE L1 -3331 2812 2745 8 1633 47 67 0 0 chrX 137412750 137412839 -29237457 + AT_rich Low_complexity Low_complexity 1 89 0 8 1633 278 0 54 0 chrX 137412860 137412897 -29237399 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 8 1633 6302 67 44 6 chrX 137413353 137414280 -29236016 - L1VL2 LINE L1 -2517 1098 144 8 1633 5073 132 42 13 chrX 137414339 137415170 -29235126 + Lx LINE L1 5800 6654 0 8 1633 541 148 28 0 chrX 137415183 137415291 -29235005 + GA-rich Low_complexity Low_complexity 3 113 0 8 1633 193 49 0 89 chrX 137415289 137415334 -29234962 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 8 1633 198 0 0 0 chrX 137415540 137415562 -29234734 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 8 1633 377 353 36 31 chrX 137415682 137415878 -29234418 + MIRb SINE MIR 47 243 -25 8 1633 277 288 88 132 chrX 137416127 137416355 -29233941 + MER20 DNA MER1_type 2 219 0 8 1633 373 286 18 0 chrX 137416470 137416582 -29233714 + PB1D10 SINE Alu 1 114 -3 8 1633 6791 107 56 12 chrX 137416658 137417738 -29232558 + Lx3C LINE L1 5843 6969 -7 8 1633 422 191 140 35 chrX 137417950 137418064 -29232232 + RSINE1 SINE B4 37 162 -3 8 1633 329 262 107 32 chrX 137418091 137418343 -29231953 + L1MB7 LINE L1 5814 6084 -100 8 1633 377 257 111 0 chrX 137418860 137419031 -29231265 - MER53 DNA hAT -3 190 1 8 1633 720 149 16 0 chrX 137419046 137419167 -29231129 + B1_Mur1 SINE Alu 17 139 -10 8 1633 373 248 15 88 chrX 137419167 137419183 -29231113 + ID_B1 SINE B4 98 224 0 8 1633 708 235 0 22 chrX 137420631 137420770 -29229526 + B1_Mur1 SINE Alu 2 137 -12 8 1633 2753 93 115 51 chrX 137421099 137421587 -29228709 - MURVY-LTR LTR ERV1 0 519 1 8 1633 390 255 92 0 chrX 137422494 137422592 -29227704 + PB1D7 SINE Alu 1 107 -13 8 1633 310 323 6 6 chrX 137422592 137422760 -29227536 + (TG)n Simple_repeat Simple_repeat 1 168 0 8 1633 255 170 0 0 chrX 137422814 137422861 -29227435 + GA-rich Low_complexity Low_complexity 1 47 0 8 1633 269 305 122 41 chrX 137423256 137423379 -29226917 - B4A SINE B4 -156 136 4 8 1633 231 353 17 8 chrX 137423566 137423683 -29226613 + MER44D DNA MER2_type 1 118 -587 9 1633 296 156 91 0 chrX 137423693 137423770 -29226526 + MER44D DNA MER2_type 503 586 -119 9 1633 569 235 50 65 chrX 137423779 137423979 -29226317 - B3A SINE B2 -1 197 1 9 1633 299 223 20 2 chrX 137424054 137424135 -29226161 - MTE2a LTR MaLR -20 359 276 9 1633 227 384 35 11 chrX 137424523 137424610 -29225686 + MER44D DNA MER2_type 610 698 -7 9 1633 398 265 23 35 chrX 137425322 137425494 -29224802 - L2b LINE L2 -296 3079 2910 9 1633 475 246 61 0 chrX 137427134 137427248 -29223048 - ID_B1 SINE B4 -23 201 81 9 1633 240 264 59 44 chrX 137427279 137427414 -29222882 + RMER12 LTR ERVK 710 846 -476 9 1633 2586 289 68 12 chrX 137427488 137428339 -29221957 + Lx8 LINE L1 6400 7298 -175 9 1633 2146 97 18 30 chrX 137428367 137428696 -29221600 - IAPLTR2b LTR ERVK -2 325 1 9 1633 6256 40 24 12 chrX 137428698 137429460 -29220836 - IAPEz-int LTR ERVK -2 6479 5709 9 1633 3177 30 0 8 chrX 137429434 137429808 -29220488 - IAPEz-int LTR ERVK -2110 4371 4001 9 1633 396 89 0 0 chrX 137429806 137429862 -29220434 - IAPEz-int LTR ERVK -3707 2774 2719 9 1633 16556 59 76 28 chrX 137429861 137432125 -29218171 - IAPEz-int LTR ERVK -4136 2345 3 9 1633 2146 97 18 30 chrX 137432132 137432461 -29217835 - IAPLTR2b LTR ERVK -2 325 1 9 1633 4347 86 44 10 chrX 137432600 137432822 -29217474 + Lx4A LINE L1 6428 6653 -405 9 1633 3047 57 42 0 chrX 137432822 137433206 -29217090 - MTB LTR MaLR 0 400 1 9 1633 4347 86 44 10 chrX 137433206 137433591 -29216705 + Lx4A LINE L1 6654 7056 -2 9 1633 215 298 182 10 chrX 137434158 137434375 -29215921 - MIR SINE MIR -1 261 5 9 1633 1227 132 13 80 chrX 137434487 137434726 -29215570 - MTC LTR MaLR 0 421 199 9 1633 2477 250 41 2 chrX 137434743 137435252 -29215044 - Lx6 LINE L1 -8 7452 6924 9 1633 1294 143 0 5 chrX 137435255 137435466 -29214830 - MTC LTR MaLR -210 211 2 9 1633 591 336 35 44 chrX 137435466 137435614 -29214682 + B4 SINE B4 75 219 -73 9 1633 186 43 0 0 chrX 137435614 137435637 -29214659 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 1633 591 336 35 44 chrX 137435637 137435708 -29214588 + B4 SINE B4 220 291 -1 9 1633 342 0 0 0 chrX 137435735 137435773 -29214523 + (CA)n Simple_repeat Simple_repeat 2 39 0 9 1633 518 59 39 29 chrX 137435835 137435939 -29214357 + (CAAAA)n Simple_repeat Simple_repeat 3 107 0 9 1633 283 247 21 31 chrX 137436172 137436268 -29214028 + L1MA5 LINE L1 6204 6298 -2 9 1633 1593 28 0 0 chrX 137436825 137437005 -29213291 + L1Md_F2 LINE L1 5407 5586 -297 9 1633 7417 60 53 2 chrX 137437005 137437953 -29212343 + L1Md_F2 LINE L1 5587 6582 0 9 1633 204 67 0 0 chrX 137439931 137439961 -29210335 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 9 1633 445 220 0 0 chrX 137439961 137440054 -29210242 - B1F SINE Alu -13 107 15 9 1633 269 250 48 39 chrX 137440020 137440124 -29210172 - MTD LTR MaLR -314 105 1 9 1633 24 53 0 0 chrX 137443002 137443040 -29207256 + AT_rich Low_complexity Low_complexity 1 38 0 9 1633 23 0 0 0 chrX 137443550 137443573 -29206723 + AT_rich Low_complexity Low_complexity 1 23 0 9 1633 47 33 0 0 chrX 137444871 137444932 -29205364 + AT_rich Low_complexity Low_complexity 1 61 0 9 1633 318 295 16 24 chrX 137444934 137445059 -29205237 + Lx5 LINE L1 6924 7047 -3 9 1633 196 214 247 12 chrX 137445212 137445297 -29204999 - MIRb SINE MIR -73 195 91 9 1633 225 214 0 0 chrX 137445389 137445431 -29204865 + (TA)n Simple_repeat Simple_repeat 2 43 0 9 1633 1534 89 264 0 chrX 137445596 137445854 -29204442 - ORR1A3 LTR MaLR 0 326 1 9 1633 711 264 37 37 chrX 137446057 137446273 -29204023 - B3 SINE B2 0 216 1 9 1633 26 30 0 0 chrX 137446309 137446342 -29203954 + AT_rich Low_complexity Low_complexity 1 33 0 9 1633 705 148 123 15 chrX 137447279 137447409 -29202887 - ORR1C2 LTR MaLR -87 297 154 9 1633 236 354 25 0 chrX 137447803 137447882 -29202414 + L2b LINE L2 3245 3325 -50 9 1633 330 237 82 0 chrX 137447885 137447982 -29202314 + L1MA7 LINE L1 6011 6115 -176 9 1633 305 151 174 0 chrX 137447997 137448083 -29202213 - Lx9 LINE L1 -8 7636 7536 9 1633 2496 45 0 6 chrX 137448103 137448416 -29201880 - L1_Mus1 LINE L1 0 6567 6257 9 1633 1087 237 124 45 chrX 137448455 137448809 -29201487 - Lx6 LINE L1 -8 7452 7071 9 1633 369 192 9 28 chrX 137449169 137449276 -29201020 + L1MDa LINE L1 1298 1402 -5138 9 1633 410 313 103 26 chrX 137449267 137449654 -29200642 + L1MDa LINE L1 1890 2306 -4327 9 1633 226 280 117 17 chrX 137449760 137449880 -29200416 + L1MDa LINE L1 3043 3174 -3363 9 1633 263 316 40 0 chrX 137449905 137449981 -29200315 + ID4_ SINE ID 1 79 -4 9 1633 487 296 17 40 chrX 137449985 137450232 -29200064 - Charlie1 DNA MER1_type -2515 266 62 9 1633 235 321 0 0 chrX 137450286 137450339 -29199957 + MER81 DNA AcHobo 1 53 -61 9 1633 363 373 57 0 chrX 137453056 137453249 -29197047 + MIRb SINE MIR 64 267 -1 9 1633 738 282 50 0 chrX 137453668 137453870 -29196426 + ID_B1 SINE B4 3 214 -10 9 1633 458 171 12 12 chrX 137454321 137454404 -29195892 - PB1D10 SINE Alu -7 110 28 9 1633 661 278 28 6 chrX 137454440 137454617 -29195679 + B3A SINE B2 2 182 -16 9 1633 277 358 51 32 chrX 137455391 137455547 -29194749 + MER20B DNA MER1_type 9 167 -616 9 1633 342 308 76 8 chrX 137456351 137456469 -29193827 + MIR3 SINE MIR 34 159 -49 9 1633 211 306 114 16 chrX 137458248 137458291 -29192005 - ID_B1 SINE B4 -89 135 1 9 1633 212 211 100 50 chrX 137458291 137458371 -29191925 - BC1_Mm scRNA scRNA -68 84 1 9 1633 221 307 88 0 chrX 137458373 137458482 -29191814 + MIR3 SINE MIR 79 197 -11 9 1633 337 335 9 83 chrX 137458630 137458733 -29191563 - MER113A DNA MER1_type -1 313 215 9 1633 1148 56 7 0 chrX 137458733 137458877 -29191419 + B1_Mus1 SINE Alu 3 147 -1 9 1633 337 335 9 83 chrX 137458877 137458991 -29191305 - MER113A DNA MER1_type -100 214 112 9 1633 24 0 0 0 chrX 137459350 137459374 -29190922 + AT_rich Low_complexity Low_complexity 1 24 0 9 1633 461 260 48 0 chrX 137459519 137459665 -29190631 - Lx9 LINE L1 -161 7483 7331 9 1633 627 288 84 13 chrX 137459677 137459976 -29190320 - Lx8 LINE L1 -35 7438 7119 9 1633 322 290 21 31 chrX 137460631 137460727 -29189569 + MIRc SINE MIR 108 202 -66 9 1633 242 279 35 81 chrX 137461547 137461633 -29188663 - B1F1 SINE Alu 0 149 68 9 1633 338 259 12 0 chrX 137461557 137461638 -29188658 - ID_B1 SINE B4 -3 221 140 9 1633 1249 56 0 0 chrX 137462347 137462507 -29187789 - L1_Mus2 LINE L1 0 6566 6407 9 1633 188 231 0 25 chrX 137462672 137462712 -29187584 + MIR SINE MIR 21 59 -149 9 1633 25 31 0 0 chrX 137463184 137463216 -29187080 + AT_rich Low_complexity Low_complexity 1 32 0 9 1633 284 349 70 64 chrX 137463951 137464263 -29186033 - L2b LINE L2 -24 3351 3038 9 1633 238 292 33 33 chrX 137465229 137465321 -29184975 - MIRm SINE MIR -117 159 68 9 1633 598 286 45 8 chrX 137465620 137465754 -29184542 + ID_B1 SINE B4 80 218 -6 9 1633 186 298 74 58 chrX 137466063 137466184 -29184112 + MIRm SINE MIR 28 150 -126 9 1633 203 333 0 16 chrX 137466363 137466427 -29183869 + L2a LINE L2 3358 3420 -6 9 1633 478 323 53 29 chrX 137467996 137468419 -29181877 + L1M2 LINE L1 5040 5440 -440 9 1633 474 18 0 0 chrX 137468727 137468782 -29181514 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 9 1633 221 233 50 0 chrX 137468782 137468842 -29181454 + CT-rich Low_complexity Low_complexity 2 64 0 9 1633 207 0 0 0 chrX 137469011 137469034 -29181262 + (A)n Simple_repeat Simple_repeat 1 23 0 9 1633 23 54 0 0 chrX 137469182 137469219 -29181077 + AT_rich Low_complexity Low_complexity 1 37 0 9 1633 1000 329 57 25 chrX 137469456 137469979 -29180317 - Lx8 LINE L1 0 7473 6934 9 1633 525 220 9 35 chrX 137469981 137470094 -29180202 - PB1D10 SINE Alu -7 110 1 9 1633 258 206 132 0 chrX 137471117 137471185 -29179111 - MIR SINE MIR -14 248 172 9 1633 567 241 69 0 chrX 137471188 137471333 -29178963 + ORSL DNA Tip100 112 266 -9 9 1633 951 179 89 8 chrX 137471393 137471641 -29178655 - Lx9 LINE L1 -11 7633 7366 9 1633 972 143 168 5 chrX 137471913 137472103 -29178193 + URR1B DNA MER1_type 5 225 0 9 1633 288 186 0 0 chrX 137472470 137472529 -29177767 + (GCCTAA)n Simple_repeat Simple_repeat 3 61 0 9 1633 545 316 21 18 chrX 137473706 137473990 -29176306 - L1ME2 LINE L1 -2 6162 5878 9 1633 262 320 9 28 chrX 137474584 137474690 -29175606 - Charlie4z DNA MER1_type -6 161 58 9 1633 1471 262 77 30 chrX 137474712 137475216 -29175080 - Lx8 LINE L1 0 7473 6946 9 1633 1404 75 0 0 chrX 137475361 137475547 -29174749 - L1Md_F2 LINE L1 -12 6570 6385 9 1633 302 377 66 0 chrX 137476189 137476295 -29174001 - PB1D10 SINE Alu 0 117 5 9 1633 1709 132 0 8 chrX 137476362 137476629 -29173667 - ORR1A3 LTR MaLR 0 326 62 9 1633 938 74 0 0 chrX 137476609 137476730 -29173566 - B1_Mus1 SINE Alu -7 141 21 9 1633 573 256 45 8 chrX 137476726 137476860 -29173436 + B1F1 SINE Alu 11 149 0 9 1633 1191 335 78 68 chrX 137477111 137477834 -29172462 - MER21B LTR ERV1 -86 777 48 9 1633 252 77 0 0 chrX 137478002 137478041 -29172255 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 1633 237 309 101 22 chrX 137478249 137478388 -29171908 - Charlie4z DNA MER1_type -11 156 7 9 1633 593 267 92 14 chrX 137478661 137478856 -29171440 + B3A SINE B2 2 211 -5 9 1633 1889 153 52 26 chrX 137479224 137479612 -29170684 - L1_Mur2 LINE L1 -699 5178 4781 9 1633 1074 112 76 0 chrX 137479607 137479804 -29170492 + L1_Mur2 LINE L1 5190 5401 -476 9 1633 538 238 153 58 chrX 137480007 137480248 -29170048 + RMER20B LTR ERVK 234 497 -130 9 1633 287 328 107 16 chrX 137480422 137480543 -29169753 + RMER20B LTR ERVK 482 613 -14 9 1633 234 312 0 30 chrX 137480531 137480597 -29169699 + RMER20B LTR ERVK 504 567 -60 9 1633 2508 102 11 3 chrX 137480615 137480990 -29169306 + L1_Mm LINE L1 5410 5787 -96 9 1633 3602 95 12 107 chrX 137480982 137481355 -29168941 + Lx LINE L1 5272 5622 -261 9 1633 240 35 0 0 chrX 137481355 137481384 -29168912 + (TA)n Simple_repeat Simple_repeat 1 29 0 9 1633 6359 82 40 17 chrX 137481384 137482412 -29167884 + Lx LINE L1 5623 6633 -21 9 1633 348 266 42 34 chrX 137484377 137484530 -29165766 - MIRb SINE MIR -6 256 102 9 1633 1836 248 57 12 chrX 137484762 137485272 -29165024 + Lx6 LINE L1 6922 7454 -6 9 1633 522 243 86 22 chrX 137485278 137485417 -29164879 - B1_Mur2 SINE Alu 0 149 2 9 1633 765 167 65 0 chrX 137485429 137485567 -29164729 - B1_Mur1 SINE Alu -1 148 2 9 1633 597 293 108 33 chrX 137486082 137486658 -29163638 + L1ME4a LINE L1 5499 6117 -7 1 1633 550 211 174 22 chrX 137487268 137487452 -29162844 + B3 SINE B2 5 216 0 1 1633 671 251 108 81 chrX 137487808 137487994 -29162302 - B3A SINE B2 -4 191 1 1 1633 247 298 118 37 chrX 137488725 137488861 -29161435 - MIRb SINE MIR -36 232 86 1 1633 302 272 174 0 chrX 137488942 137489034 -29161262 - PB1D10 SINE Alu 0 117 10 1 1633 182 219 16 0 chrX 137489235 137489299 -29160997 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1633 268 264 35 70 chrX 137489568 137489682 -29160614 - B3A SINE B2 0 198 89 1 1633 415 233 57 19 chrX 137489882 137489987 -29160309 + PB1D10 SINE Alu 9 117 0 1 1633 787 229 160 84 chrX 137492199 137492369 -29157927 - Cheshire DNA MER1_type 0 2420 2250 1 1633 747 201 190 0 chrX 137492369 137492543 -29157753 - B3 SINE B2 -9 207 1 1 1633 787 229 160 84 chrX 137492543 137492754 -29157542 - Cheshire DNA MER1_type -171 2249 2010 1 1633 307 313 20 20 chrX 137492790 137492891 -29157405 - HAL1-3A_ME LINE L1 -465 2393 2293 1 1633 342 0 0 0 chrX 137492895 137492933 -29157363 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1633 405 255 20 0 chrX 137492949 137493047 -29157249 - RSINE1 SINE B4 -22 143 44 1 1633 270 154 26 167 chrX 137493119 137493145 -29157151 - L1MC3 LINE L1 -31 7754 7732 1 1633 726 196 21 14 chrX 137493145 137493285 -29157011 + B1_Mur2 SINE Alu 1 141 -8 1 1633 270 143 30 222 chrX 137493285 137493358 -29156938 - L1MC3 LINE L1 -54 7731 7688 1 1633 415 212 38 0 chrX 137493396 137493476 -29156820 + ID4 SINE ID 1 83 0 1 1633 1432 259 64 15 chrX 137493505 137494131 -29156165 - L1MB7 LINE L1 -41 6143 5478 1 1633 431 298 0 0 chrX 137494131 137494235 -29156061 - PB1D10 SINE Alu 0 117 14 1 1633 272 249 107 0 chrX 137494396 137494518 -29155778 - L1MB7 LINE L1 -811 5335 5199 1 1634 368 262 39 10 chrX 137494563 137494667 -29155629 - PB1D10 SINE Alu -10 107 1 1 1634 420 311 104 0 chrX 137494712 137494847 -29155449 - B1F SINE Alu 0 149 1 1 1634 408 247 102 17 chrX 137495166 137495343 -29154953 - L1MC3 LINE L1 -233 7552 7361 1 1634 816 260 34 25 chrX 137495371 137495608 -29154688 - Cheshire DNA MER1_type -456 1964 1726 1 1634 350 328 19 39 chrX 137495624 137495830 -29154466 - L1ME1 LINE L1 -23 6156 5955 1 1634 7468 1 0 0 chrX 137495938 137496800 -29153496 - L1Md_A LINE L1 0 6582 5721 1 1634 1078 284 44 2 chrX 137496923 137497375 -29152921 - L1MB7 LINE L1 -276 5908 5438 1 1634 654 274 83 13 chrX 137497375 137497604 -29152692 - Cheshire DNA MER1_type -681 1739 1495 1 1634 450 0 0 0 chrX 137497900 137497950 -29152346 + (TTTTA)n Simple_repeat Simple_repeat 3 52 0 1 1634 338 267 165 15 chrX 137498627 137498760 -29151536 + MER3 DNA MER1_type 41 193 -16 1 1634 247 302 11 65 chrX 137499515 137499607 -29150689 + ORR1E LTR MaLR 1 87 -272 1 1634 186 43 0 0 chrX 137499914 137499937 -29150359 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 1634 911 196 150 28 chrX 137500003 137500250 -29150046 - B4A SINE B4 -12 280 4 1 1634 776 254 153 0 chrX 137500443 137500718 -29149578 - L1MDa LINE L1 -3216 3321 3005 2 1634 417 202 29 0 chrX 137500746 137500850 -29149446 + L1MA8 LINE L1 6185 6291 0 3 1634 406 281 80 7 chrX 137500854 137501122 -29149174 - L1MDa LINE L1 -5013 1620 1314 2 1634 359 186 0 0 chrX 137501148 137501218 -29149078 + B1_Mur4 SINE Alu 81 150 0 4 1634 704 269 44 20 chrX 137501272 137501568 -29148728 - L1MDa LINE L1 -5360 1273 971 2 1634 811 309 97 67 chrX 137501625 137501885 -29148411 - L1MDa LINE L1 -5985 648 372 2 1634 4202 80 5 2 chrX 137501885 137502436 -29147860 + L1_Mus3 LINE L1 6079 6631 -7 5 1634 811 309 97 67 chrX 137502436 137502785 -29147511 - L1MDa LINE L1 -6262 371 22 2 1634 285 75 0 0 chrX 137502999 137503039 -29147257 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1634 509 206 28 18 chrX 137503134 137503243 -29147053 - PB1D7 SINE Alu -1 119 10 7 1634 257 276 81 0 chrX 137503170 137503257 -29147039 - B4 SINE B4 -118 174 81 8 1634 1360 146 22 14 chrX 137503274 137503497 -29146799 - URR1B DNA MER1_type 0 225 1 9 1634 854 298 24 41 chrX 137503663 137503692 -29146604 - B4A SINE B4 -2 290 268 1 1634 330 67 0 0 chrX 137503692 137503737 -29146559 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1634 854 298 24 41 chrX 137503737 137503998 -29146298 - B4A SINE B4 -25 267 5 1 1634 1723 26 0 0 chrX 137505013 137505205 -29145091 - B2_Mm1a SINE B2 -1 192 1 1 1634 402 283 17 0 chrX 137505337 137505457 -29144839 - MER57E2 LTR ERV1 -2 400 279 1 1634 358 260 89 8 chrX 137505508 137505632 -29144664 - MER57E2 LTR ERV1 -209 163 30 1 1634 237 180 0 0 chrX 137505650 137505700 -29144596 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1634 923 268 39 85 chrX 137505700 137506006 -29144290 - B4 SINE B4 0 292 1 1 1634 703 173 102 19 chrX 137506422 137506583 -29143713 - Lx6 LINE L1 -4 7456 7305 1 1634 5094 181 19 60 chrX 137506600 137507624 -29142672 - Lx6 LINE L1 -363 7097 6116 1 1634 228 262 30 15 chrX 137507630 137507696 -29142600 - B1_Mur2 SINE Alu -6 143 77 1 1634 739 265 137 16 chrX 137507717 137508190 -29142106 - L1ME2 LINE L1 -32 6130 5587 1 1634 217 284 0 26 chrX 137509221 137509297 -29140999 + CT-rich Low_complexity Low_complexity 5 78 0 1 1634 492 18 0 0 chrX 137509306 137509363 -29140933 + (TC)n Simple_repeat Simple_repeat 2 58 0 2 1634 278 50 25 0 chrX 137509363 137509402 -29140894 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1634 991 276 33 4 chrX 137509464 137509737 -29140559 - B4A SINE B4 -4 288 8 2 1634 461 315 20 20 chrX 137510044 137510190 -29140106 - ID_B1 SINE B4 0 224 79 2 1634 299 325 75 40 chrX 137511330 137511529 -29138767 + MIRc SINE MIR 5 210 -58 2 1634 346 273 47 8 chrX 137512124 137512253 -29138043 + MER3 DNA MER1_type 17 150 -59 2 1634 714 224 14 0 chrX 137512244 137512387 -29137909 - B1_Mur4 SINE Alu 0 150 6 2 1634 311 270 0 51 chrX 137512416 137512494 -29137802 - ID4_ SINE ID -9 74 1 2 1634 585 290 65 103 chrX 137512730 137513022 -29137274 - B4A SINE B4 -10 282 2 2 1634 185 0 40 0 chrX 137515041 137515066 -29135230 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 1634 1046 69 0 0 chrX 137515744 137515874 -29134422 - L1_Mus1 LINE L1 -346 6220 6091 3 1634 2851 70 0 0 chrX 137515874 137516232 -29134064 + L1_Mus1 LINE L1 6210 6567 0 3 1634 192 40 0 0 chrX 137516412 137516437 -29133859 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1634 880 313 171 50 chrX 137516533 137517319 -29132977 + L1M4 LINE L1 14 894 -5648 3 1634 245 29 29 0 chrX 137517568 137517602 -29132694 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 3 1634 1283 303 128 44 chrX 137519291 137520040 -29130256 - MER21B LTR ERV1 -32 831 20 3 1634 383 233 0 88 chrX 137520044 137520157 -29130139 - MER21B LTR ERV1 -760 103 1 3 1634 21 57 0 0 chrX 137520652 137520687 -29129609 + AT_rich Low_complexity Low_complexity 1 35 0 3 1634 262 263 39 69 chrX 137521076 137521178 -29129118 + Arthur1B DNA Tip100 49 147 -1078 3 1634 569 240 13 58 chrX 137521863 137522018 -29128278 - B1F SINE Alu -1 148 1 3 1634 377 327 53 0 chrX 137522220 137522370 -29127926 - MIRb SINE MIR -58 210 53 3 1634 219 304 0 0 chrX 137522390 137522446 -29127850 - PB1D10 SINE Alu -39 78 23 4 1634 192 40 0 0 chrX 137524595 137524620 -29125676 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1634 642 229 20 27 chrX 137525077 137525225 -29125071 + B1_Mur1 SINE Alu 3 149 0 4 1634 653 252 14 0 chrX 137525236 137525379 -29124917 + B1F SINE Alu 5 149 0 4 1634 262 274 0 0 chrX 137525901 137525963 -29124333 - MIRc SINE MIR -114 154 93 4 1634 323 299 31 79 chrX 137526148 137526275 -29124021 - B1F SINE Alu -21 128 8 4 1634 501 17 0 0 chrX 137526298 137526356 -29123940 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1634 999 237 51 20 chrX 137526356 137526610 -29123686 - B4A SINE B4 -23 269 8 4 1634 484 234 28 18 chrX 137526633 137526742 -29123554 - B1F SINE Alu -17 132 23 4 1634 216 0 0 0 chrX 137527049 137527073 -29123223 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 4 1634 375 78 0 0 chrX 137527279 137527330 -29122966 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 5 1634 626 164 103 0 chrX 137528058 137528174 -29122122 + RSINE1 SINE B4 3 130 -35 5 1634 279 297 68 19 chrX 137528229 137528332 -29121964 - L2c LINE L2 -4 3383 3276 5 1634 495 0 0 0 chrX 137528399 137528454 -29121842 + (TA)n Simple_repeat Simple_repeat 1 55 0 5 1634 382 271 92 14 chrX 137528477 137528619 -29121677 + B4A SINE B4 2 154 -138 5 1634 402 21 0 0 chrX 137528619 137528666 -29121630 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 1634 268 134 0 118 chrX 137530552 137530679 -29119617 + (CAGAGA)n Simple_repeat Simple_repeat 1 112 0 5 1634 347 160 0 128 chrX 137530877 137531049 -29119247 + GA-rich Low_complexity Low_complexity 4 153 0 5 1634 235 232 4 79 chrX 137531051 137531328 -29118968 + (CAGAGA)n Simple_repeat Simple_repeat 1 256 0 5 1634 196 150 0 112 chrX 137531328 137531471 -29118825 + GA-rich Low_complexity Low_complexity 3 129 0 5 1634 198 190 23 55 chrX 137531475 137531603 -29118693 + (CAGAGA)n Simple_repeat Simple_repeat 1 124 0 6 1634 421 196 0 114 chrX 137531752 137531954 -29118342 + (CAGAGA)n Simple_repeat Simple_repeat 1 179 0 6 1634 375 233 5 75 chrX 137531998 137532184 -29118112 + GA-rich Low_complexity Low_complexity 3 175 0 6 1634 253 179 27 67 chrX 137532187 137532337 -29117959 + (CAGAGA)n Simple_repeat Simple_repeat 1 144 0 6 1634 404 218 0 117 chrX 137532432 137532629 -29117667 + (CAGAGA)n Simple_repeat Simple_repeat 2 175 0 6 1634 234 269 0 81 chrX 137532568 137532742 -29117554 + GA-rich Low_complexity Low_complexity 4 163 0 6 1634 342 152 0 0 chrX 137532785 137532844 -29117452 + (CAGAGA)n Simple_repeat Simple_repeat 1 59 0 6 1634 197 172 0 94 chrX 137532984 137533112 -29117184 + GA-rich Low_complexity Low_complexity 3 118 0 6 1634 458 222 11 78 chrX 137533115 137533306 -29116990 + (CAGAGA)n Simple_repeat Simple_repeat 2 179 0 6 1634 495 220 5 103 chrX 137533380 137533959 -29116337 + (CAGAGA)n Simple_repeat Simple_repeat 1 522 0 6 1634 413 225 0 66 chrX 137533886 137534067 -29116229 + GA-rich Low_complexity Low_complexity 3 171 0 7 1634 189 168 0 115 chrX 137584095 137584243 -29066053 + (CAGAGA)n Simple_repeat Simple_repeat 1 131 0 7 1634 384 227 10 102 chrX 137584303 137584499 -29065797 + (CAGAGA)n Simple_repeat Simple_repeat 2 179 0 7 1634 273 244 0 83 chrX 137584425 137584617 -29065679 + GA-rich Low_complexity Low_complexity 1 176 0 7 1634 410 243 0 92 chrX 137584554 137584749 -29065547 + (CAGAGA)n Simple_repeat Simple_repeat 2 178 0 7 1634 224 186 0 105 chrX 137584666 137584780 -29065516 + GA-rich Low_complexity Low_complexity 4 105 0 7 1634 427 185 16 108 chrX 137584912 137585106 -29065190 + (CAGAGA)n Simple_repeat Simple_repeat 4 179 0 7 1634 218 193 0 82 chrX 137585138 137585285 -29065011 + (CAGAGA)n Simple_repeat Simple_repeat 2 136 0 7 1634 237 258 12 85 chrX 137585301 137585516 -29064780 + GA-rich Low_complexity Low_complexity 1 199 0 7 1634 338 251 16 79 chrX 137585540 137585730 -29064566 + (CAGAGA)n Simple_repeat Simple_repeat 2 179 0 7 1634 297 196 0 91 chrX 137585850 137586047 -29064249 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 7 1634 377 230 0 110 chrX 137586070 137586270 -29064026 + (CAGAGA)n Simple_repeat Simple_repeat 1 178 0 7 1634 215 287 0 65 chrX 137586184 137586352 -29063944 + GA-rich Low_complexity Low_complexity 2 158 0 7 1634 211 172 0 59 chrX 137586501 137586569 -29063727 + (CAGAGA)n Simple_repeat Simple_repeat 2 65 0 8 1634 250 215 23 79 chrX 137586581 137586799 -29063497 + GA-rich Low_complexity Low_complexity 1 205 0 8 1634 307 239 0 94 chrX 137586751 137586922 -29063374 + (CAGAGA)n Simple_repeat Simple_repeat 1 155 0 8 1634 444 214 0 96 chrX 137586934 137587131 -29063165 + (CAGAGA)n Simple_repeat Simple_repeat 2 179 0 8 1634 368 236 26 79 chrX 137587232 137587421 -29062875 + (CAGAGA)n Simple_repeat Simple_repeat 1 179 0 8 1634 270 162 0 70 chrX 137587506 137587592 -29062704 + (CAGAGA)n Simple_repeat Simple_repeat 5 84 0 8 1634 425 213 0 114 chrX 137587596 137587908 -29062388 + (CAGAGA)n Simple_repeat Simple_repeat 1 276 0 8 1634 401 233 0 100 chrX 137587947 137588147 -29062149 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 8 1634 332 225 0 79 chrX 137588063 137588227 -29062069 + GA-rich Low_complexity Low_complexity 3 153 0 8 1634 388 268 3 61 chrX 137588253 137588630 -29061666 + GA-rich Low_complexity Low_complexity 1 355 0 8 1634 368 267 3 85 chrX 137588554 137588949 -29061347 + (CAGAGA)n Simple_repeat Simple_repeat 1 362 0 8 1634 292 236 0 94 chrX 137588980 137589172 -29061124 + GA-rich Low_complexity Low_complexity 4 177 0 8 1634 375 213 0 104 chrX 137589091 137589264 -29061032 + (CAGAGA)n Simple_repeat Simple_repeat 2 156 0 8 1634 241 244 0 77 chrX 137589207 137589376 -29060920 + GA-rich Low_complexity Low_complexity 4 159 0 8 1634 192 186 0 107 chrX 137589444 137589631 -29060665 + (CAGAGA)n Simple_repeat Simple_repeat 6 172 0 9 1634 186 159 10 93 chrX 137589657 137589754 -29060542 + (CAGAGA)n Simple_repeat Simple_repeat 1 89 0 9 1634 266 248 0 76 chrX 137589773 137589917 -29060379 + GA-rich Low_complexity Low_complexity 3 135 0 9 1634 206 165 0 102 chrX 137589921 137590049 -29060247 + (CAGAGA)n Simple_repeat Simple_repeat 4 118 0 9 1634 394 217 0 112 chrX 137590081 137590278 -29060018 + (CAGAGA)n Simple_repeat Simple_repeat 5 179 0 9 1634 393 354 0 0 chrX 137590330 137590505 -29059791 + GA-rich Low_complexity Low_complexity 3 177 0 9 1634 473 245 37 28 chrX 137590524 137590633 -29059663 + B1_Mur2 SINE Alu 40 149 0 9 1634 342 261 148 0 chrX 137590830 137590945 -29059351 - MER5A DNA MER1_type -54 135 4 9 1634 356 310 106 0 chrX 137591668 137591781 -29058515 + MER2 DNA MER2_type 14 138 -207 9 1634 336 316 72 23 chrX 137591796 137591961 -29058335 - MIRb SINE MIR -96 172 8 9 1634 190 319 39 84 chrX 137592381 137592542 -29057754 - L3 LINE CR1 -696 3793 3641 9 1634 351 0 0 0 chrX 137592542 137592581 -29057715 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 1634 190 319 39 84 chrX 137592581 137592597 -29057699 - L3 LINE CR1 -849 3640 3625 9 1634 433 339 93 6 chrX 137593520 137593769 -29056527 + MIR SINE MIR 5 267 -1 1 1634 198 0 0 0 chrX 137594169 137594191 -29056105 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 1634 374 287 15 23 chrX 137594261 137594393 -29055903 + GA-rich Low_complexity Low_complexity 3 133 0 1 1634 502 291 43 0 chrX 137595542 137595683 -29054613 - B1F SINE Alu -2 147 1 1 1634 302 279 0 0 chrX 137595715 137595783 -29054513 - ID4_ SINE ID -14 69 2 1 1634 315 0 0 0 chrX 137595960 137595995 -29054301 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 1 1634 262 286 124 16 chrX 137596194 137596315 -29053981 - B3A SINE B2 -7 191 58 1 1634 777 164 70 119 chrX 137596391 137596439 -29053857 - B2_Mm2 SINE B2 -1 194 165 1 1634 336 48 0 0 chrX 137596439 137596481 -29053815 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 1634 777 164 70 119 chrX 137596481 137596633 -29053663 - B2_Mm2 SINE B2 -31 164 4 1 1634 415 240 73 0 chrX 137597425 137597521 -29052775 + PB1D10 SINE Alu 9 111 -6 1 1634 720 244 125 0 chrX 137598496 137598672 -29051624 - MER58A DNA MER1_type 0 224 27 1 1634 727 296 15 18 chrX 137599385 137599657 -29050639 - B4A SINE B4 -19 273 3 1 1634 456 19 0 0 chrX 137601810 137601863 -29048433 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1634 361 358 53 24 chrX 137603827 137603996 -29046300 - MIRc SINE MIR -58 210 37 1 1634 195 184 26 0 chrX 137604412 137604450 -29045846 - MIR SINE MIR -58 150 112 1 1634 308 303 56 0 chrX 137604826 137604915 -29045381 + B1F SINE Alu 40 133 -16 1 1634 1029 60 0 0 chrX 137604916 137605049 -29045247 + (TAGA)n Simple_repeat Simple_repeat 3 135 0 1 1634 1929 156 67 32 chrX 137605152 137605206 -29045090 + ORR1C2 LTR MaLR 1 53 -331 1 1634 2181 101 65 0 chrX 137605206 137605513 -29044783 + ORR1A2 LTR MaLR 1 327 0 1 1634 1929 156 67 32 chrX 137605513 137605626 -29044670 + ORR1C2 LTR MaLR 54 173 -211 1 1634 225 0 0 0 chrX 137605626 137605651 -29044645 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 1634 474 75 0 0 chrX 137605651 137605717 -29044579 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1634 1929 156 67 32 chrX 137605717 137605918 -29044378 + ORR1C2 LTR MaLR 174 383 -1 1 1634 2741 194 33 28 chrX 137605934 137606505 -29043791 - ORR1B1-int LTR MaLR -927 582 9 1 1634 472 113 0 34 chrX 137606484 137606573 -29043723 + ORR1C2 LTR MaLR 299 378 0 1 1634 201 224 50 33 chrX 137606860 137606920 -29043376 - MIRc SINE MIR -193 75 15 1 1634 224 309 124 86 chrX 137607816 137608050 -29042246 - L2c LINE L2 -4 3422 3180 1 1634 772 276 126 9 chrX 137608176 137608494 -29041802 + L1MA4 LINE L1 5530 5884 -416 1 1634 202 355 45 27 chrX 137608747 137608857 -29041439 - L2c LINE L2 -710 2709 2598 1 1634 207 100 0 0 chrX 137610496 137610526 -29039770 + (CAA)n Simple_repeat Simple_repeat 2 31 0 1 1634 429 62 0 0 chrX 137610881 137610946 -29039350 + L1Md_F2 LINE L1 6518 6582 0 1 1634 213 39 0 0 chrX 137611590 137611616 -29038680 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1634 424 316 21 49 chrX 137611616 137611759 -29038537 - RSINE1 SINE B4 -24 141 3 1 1634 425 264 74 33 chrX 137612179 137612394 -29037902 - L1ME3B LINE L1 -181 6059 5836 1 1634 224 289 27 154 chrX 137612803 137613024 -29037272 - MIRb SINE MIR -36 232 40 1 1634 869 267 27 18 chrX 137614668 137614889 -29035407 - ID_B1 SINE B4 -1 223 1 1 1634 1174 266 46 84 chrX 137615032 137615426 -29034870 - MTE2b LTR MaLR 0 379 1 1 1634 207 0 0 0 chrX 137615663 137615686 -29034610 + (TCC)n Simple_repeat Simple_repeat 2 24 0 1 1634 500 68 14 0 chrX 137615686 137615759 -29034537 + (TC)n Simple_repeat Simple_repeat 2 75 0 1 1634 1118 117 0 0 chrX 137616023 137616168 -29034128 - B1_Mus1 SINE Alu -2 146 2 1 1634 1117 201 55 5 chrX 137616243 137616443 -29033853 - B3 SINE B2 -5 211 2 1 1634 228 250 36 36 chrX 137618497 137618580 -29031716 + Charlie8 DNA MER1_type 313 395 -2033 1 1634 257 350 50 105 chrX 137619227 137619466 -29030830 - MIRb SINE MIR -16 252 27 1 1634 3275 198 77 33 chrX 137619521 137620227 -29030069 + RMER19A LTR ERVK 1 737 0 1 1634 208 229 0 24 chrX 137620234 137620319 -29029977 + GA-rich Low_complexity Low_complexity 5 87 0 1 1634 592 203 181 0 chrX 137620332 137620465 -29029831 - B3A SINE B2 -41 157 1 1 1634 232 286 0 146 chrX 137620575 137620603 -29029693 + ID4_ SINE ID 3 29 -54 1 1634 3852 144 110 150 chrX 137620603 137621543 -29028753 + RMER19B LTR ERVK 1 902 0 1 1634 232 286 0 146 chrX 137621543 137621596 -29028700 + ID4_ SINE ID 30 72 -11 1 1634 381 302 0 36 chrX 137621626 137621736 -29028560 + PB1D10 SINE Alu 5 110 -7 1 1634 27 29 0 0 chrX 137623485 137623519 -29026777 + AT_rich Low_complexity Low_complexity 1 34 0 1 1634 651 65 0 0 chrX 137623736 137623829 -29026467 + (TC)n Simple_repeat Simple_repeat 2 94 0 1 1634 426 299 14 42 chrX 137624058 137624201 -29026095 - MIRb SINE MIR -108 160 22 1 1635 279 0 0 0 chrX 137626062 137626093 -29024203 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1635 410 286 45 0 chrX 137627782 137627915 -29022381 - MER5A DNA MER1_type -50 139 1 1 1635 1069 216 33 14 chrX 137629200 137629411 -29020885 - B3 SINE B2 0 216 2 1 1635 366 23 0 0 chrX 137630575 137630618 -29019678 + (GGAA)n Simple_repeat Simple_repeat 1 43 0 1 1635 706 235 0 7 chrX 137631870 137632007 -29018289 + B1_Mur2 SINE Alu 3 138 -11 1 1635 477 0 0 0 chrX 137632007 137632060 -29018236 + (CCAA)n Simple_repeat Simple_repeat 2 54 0 1 1635 278 324 84 7 chrX 137633438 137633581 -29016715 - L3 LINE CR1 -102 4387 4234 1 1635 1037 139 202 31 chrX 137634151 137634344 -29015952 + URR1A DNA MER1_type 1 226 0 1 1635 556 203 102 0 chrX 137635952 137636070 -29014226 - ID_B1 SINE B4 -13 211 82 1 1635 180 77 0 0 chrX 137636835 137636861 -29013435 + (G)n Simple_repeat Simple_repeat 1 26 0 1 1635 182 320 39 0 chrX 137637154 137637232 -29013064 - L2a LINE L2 -1 3425 3345 1 1635 369 0 0 0 chrX 137637425 137637466 -29012830 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 1 1635 985 153 29 165 chrX 137637910 137638183 -29012113 + ORR1A4 LTR MaLR 1 236 -93 1 1635 622 11 42 10 chrX 137639010 137639106 -29011190 + (TCTA)n Simple_repeat Simple_repeat 1 99 0 1 1635 267 310 28 0 chrX 137639142 137639213 -29011083 - ID SINE ID -151 73 1 1 1635 255 328 0 0 chrX 137639867 137639931 -29010365 - PB1D10 SINE Alu -44 73 10 1 1635 513 0 0 0 chrX 137640413 137640470 -29009826 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1635 228 171 0 0 chrX 137641215 137641256 -29009040 + MER97c DNA MER1_type? 47 87 -1003 1 1635 556 282 0 78 chrX 137643210 137643364 -29006932 + B1F1 SINE Alu 6 147 -2 1 1635 288 111 0 0 chrX 137643365 137643410 -29006886 + (CAAT)n Simple_repeat Simple_repeat 1 45 0 1 1635 1251 48 7 0 chrX 137644216 137644362 -29005934 + B1_Mus2 SINE Alu 1 147 0 1 1635 207 0 0 0 chrX 137644362 137644385 -29005911 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1635 2240 99 76 0 chrX 137644725 137645029 -29005267 + ORR1A2 LTR MaLR 1 327 0 1 1635 240 261 19 148 chrX 137645094 137645126 -29005170 + RMER1C Other Other 1198 1227 -115 1 1635 812 135 159 0 chrX 137645126 137645252 -29005044 - B1_Mm SINE Alu 0 147 2 1 1635 322 194 119 55 chrX 137645259 137645368 -29004928 + Lx8 LINE L1 7358 7473 0 1 1635 240 261 19 148 chrX 137645368 137645381 -29004915 + RMER1C Other Other 1260 1338 -4 1 1635 619 176 97 11 chrX 137645437 137645552 -29004744 + B1_Mur3 SINE Alu 1 117 -32 1 1635 477 0 0 0 chrX 137645552 137645605 -29004691 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1635 619 173 102 8 chrX 137645605 137645629 -29004667 + B1_Mur3 SINE Alu 118 149 0 1 1635 258 32 0 0 chrX 137645949 137645980 -29004316 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1 1635 491 101 13 0 chrX 137646158 137646237 -29004059 + (TTTTC)n Simple_repeat Simple_repeat 3 82 0 1 1635 1170 205 48 74 chrX 137647653 137647990 -29002306 + Lx7 LINE L1 7369 7696 0 1 1635 395 288 24 48 chrX 137648398 137648522 -29001774 - MER33 DNA MER1_type -178 146 26 1 1635 364 330 0 0 chrX 137649261 137649355 -29000941 + B4A SINE B4 193 286 -6 1 1635 423 292 0 0 chrX 137649536 137649649 -29000647 - PB1D7 SINE Alu -7 113 1 1 1635 334 372 37 19 chrX 137649660 137649871 -29000425 + L2a LINE L2 2993 3207 -168 1 1635 2976 88 5 8 chrX 137649879 137650279 -29000017 - L1_Mus3 LINE L1 -6 6632 6234 1 1635 274 284 25 0 chrX 137650329 137650410 -28999886 - ID4 SINE ID 0 83 1 1 1635 263 320 106 8 chrX 137650442 137650565 -28999731 + L2a LINE L2 3285 3419 -7 1 1635 210 286 0 20 chrX 137650743 137650793 -28999503 - MIRb SINE MIR -194 74 26 1 1635 376 242 0 128 chrX 137652799 137652908 -28997388 - RMER30 DNA MER1_type -3 199 105 1 1635 841 199 32 24 chrX 137652985 137653181 -28997115 + B3A SINE B2 6 195 0 1 1635 195 42 0 0 chrX 137653818 137653842 -28996454 + (GAAA)n Simple_repeat Simple_repeat 1 24 0 1 1635 276 91 0 0 chrX 137653981 137654025 -28996271 + (CCAA)n Simple_repeat Simple_repeat 4 47 0 1 1635 630 247 5 68 chrX 137654194 137654385 -28995911 - B3A SINE B2 -19 179 1 1 1635 719 214 13 60 chrX 137654929 137655078 -28995218 + B1_Mur2 SINE Alu 1 142 -7 1 1635 225 65 0 0 chrX 137655084 137655115 -28995181 + (GGGA)n Simple_repeat Simple_repeat 2 32 0 1 1635 1275 269 108 59 chrX 137655376 137656124 -28994172 + L1ME2z LINE L1 5657 6441 -3 1 1635 634 257 89 81 chrX 137656115 137656745 -28993551 + L1MD LINE L1 2315 2949 -3197 1 1635 403 232 108 31 chrX 137656907 137657036 -28993260 + L1ME2z LINE L1 5947 6085 -359 1 1635 966 288 39 0 chrX 137657936 137658245 -28992051 + Tigger7 DNA MER2_type 2132 2452 -39 1 1635 360 0 0 0 chrX 137660270 137660310 -28989986 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1635 1487 51 22 6 chrX 137661812 137661991 -28988305 - B2_Mm2 SINE B2 -12 183 2 1 1635 186 43 0 0 chrX 137662267 137662290 -28988006 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1635 1486 271 41 41 chrX 137663369 137663835 -28986461 + Tigger7 DNA MER2_type 97 562 -1929 2 1635 1083 164 6 0 chrX 137664145 137664322 -28985974 - Lx4A LINE L1 -297 6761 6584 2 1635 1086 56 0 127 chrX 137666579 137666744 -28983552 - B1_Mm SINE Alu -1 146 3 2 1635 459 0 0 0 chrX 137666861 137666912 -28983384 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1635 1269 301 58 63 chrX 137667255 137667777 -28982519 + LTR53 LTR ERVL 1 519 0 2 1635 375 352 21 14 chrX 137668113 137668254 -28982042 - B1F SINE Alu 0 149 8 2 1635 561 68 0 0 chrX 137668254 137668328 -28981968 + (TCCC)n Simple_repeat Simple_repeat 2 75 0 2 1635 590 0 0 14 chrX 137668328 137668398 -28981898 + (TTTC)n Simple_repeat Simple_repeat 4 73 0 2 1635 309 276 100 56 chrX 137671364 137671544 -28978752 - MIR3 SINE MIR -3 205 18 2 1635 221 325 146 43 chrX 137672435 137672599 -28977697 + MIRb SINE MIR 54 234 -34 2 1635 207 69 0 0 chrX 137673206 137673235 -28977061 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 2 1635 264 333 0 0 chrX 137673278 137673347 -28976949 + L2b LINE L2 3088 3156 -219 2 1635 189 256 133 44 chrX 137673427 137673517 -28976779 + L2b LINE L2 3289 3386 -1 2 1635 221 224 117 33 chrX 137673875 137673935 -28976361 - L2a LINE L2 -19 3407 3343 2 1635 4398 41 0 0 chrX 137674518 137675008 -28975288 + L1Md_T LINE L1 6093 6582 0 2 1635 401 320 81 11 chrX 137675168 137675342 -28974954 - MER5A DNA MER1_type -3 186 1 2 1635 182 273 68 0 chrX 137676422 137676466 -28973830 - MIR SINE MIR -106 102 56 2 1635 545 264 14 48 chrX 137676614 137676761 -28973535 + ID_B1 SINE B4 82 223 -1 2 1635 243 319 66 18 chrX 137676634 137676800 -28973496 - YREP_Mm Unknown Unknown -1516 296 123 2 1635 1632 87 0 0 chrX 137677555 137677762 -28972534 + L1_Mus1 LINE L1 6350 6556 -11 2 1635 306 0 0 0 chrX 137677762 137677796 -28972500 + (TAA)n Simple_repeat Simple_repeat 3 36 0 2 1635 308 323 87 0 chrX 137678463 137678624 -28971672 + MIRc SINE MIR 53 227 -41 2 1635 661 282 4 68 chrX 137679573 137679833 -28970463 - Lx5 LINE L1 0 7050 6839 2 1635 3342 25 0 0 chrX 137680090 137680447 -28969849 - IAPEY2_LTR LTR ERVK 0 357 1 2 1635 3694 18 5 0 chrX 137680639 137681033 -28969263 - MTA_Mm LTR MaLR 0 396 1 2 1635 629 182 0 47 chrX 137681326 137681453 -28968843 + ORR1D1 LTR MaLR 1 121 -253 2 1635 896 208 12 27 chrX 137681455 137681658 -28968638 - ORR1D1 LTR MaLR -3 375 174 2 1635 6665 35 21 0 chrX 137681658 137682634 -28967662 + L1Md_F3 LINE L1 5391 6387 -197 2 1635 3368 37 0 3 chrX 137682634 137683015 -28967281 + L1Md_T LINE L1 6203 6582 0 2 1635 1722 39 0 5 chrX 137683011 137683216 -28967080 + L1Md_F3 LINE L1 6381 6584 0 2 1635 2476 53 0 0 chrX 137683233 137683535 -28966761 - L1_Mus3 LINE L1 -499 6139 5838 2 1635 3890 48 21 8 chrX 137683535 137684013 -28966283 + L1_Mus3 LINE L1 6154 6637 -1 2 1635 1360 195 0 0 chrX 137684470 137684696 -28965600 + URR1A DNA MER1_type 1 226 0 2 1635 495 0 0 0 chrX 137684708 137684763 -28965533 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 1635 411 73 0 0 chrX 137684763 137684817 -28965479 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1635 479 122 0 11 chrX 137686197 137686288 -28964008 + (CCAA)n Simple_repeat Simple_repeat 2 91 0 2 1635 199 391 31 61 chrX 137687032 137687228 -28963068 + L2c LINE L2 2969 3158 -229 2 1635 614 320 14 38 chrX 137687788 137688080 -28962216 - L1M5 LINE L1 -650 5544 5260 2 1635 192 111 0 0 chrX 137688523 137688559 -28961737 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1635 1174 76 14 0 chrX 137688560 137688704 -28961592 - B1_Mus1 SINE Alu -1 147 2 2 1635 36 0 0 0 chrX 137689005 137689041 -28961255 + AT_rich Low_complexity Low_complexity 1 36 0 2 1635 238 289 0 24 chrX 137689051 137689136 -28961160 + (CATA)n Simple_repeat Simple_repeat 1 83 0 2 1635 601 288 92 6 chrX 137689387 137689551 -28960745 - B3A SINE B2 -19 179 2 2 1635 9222 78 51 3 chrX 137689609 137690806 -28959490 - Lx3_Mus LINE L1 0 7009 5756 2 1635 4410 87 12 2 chrX 137690806 137691391 -28958905 + Lx3_Mus LINE L1 5184 5774 -112 2 1635 2152 132 19 17 chrX 137691387 137691748 -28958548 - Lx2B LINE L1 -21 6979 6618 2 1635 290 122 0 0 chrX 137691739 137691788 -28958508 - L1_Mur1 LINE L1 -823 5063 5015 2 1635 437 261 107 15 chrX 137692094 137692300 -28957996 - L1MD3 LINE L1 -25 7970 7746 2 1635 504 182 109 0 chrX 137692331 137692468 -28957828 - L1MB3 LINE L1 -2 6181 6030 2 1635 225 0 0 0 chrX 137692677 137692702 -28957594 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 1635 628 303 6 6 chrX 137693162 137693328 -28956968 - MER5A1 DNA MER1_type 0 166 1 2 1635 375 217 24 12 chrX 137693346 137693430 -28956866 - MER5B DNA MER1_type -11 167 83 2 1635 446 263 43 9 chrX 137693445 137693560 -28956736 + MLT1A LTR MaLR 1 119 -255 2 1635 3362 26 45 0 chrX 137693749 137694128 -28956168 - MTA_Mm LTR MaLR 0 396 1 2 1635 190 271 208 0 chrX 137694147 137694195 -28956101 - MER5B DNA MER1_type -100 78 21 2 1635 547 216 46 39 chrX 137694332 137694462 -28955834 - ID_B1 SINE B4 -10 214 84 2 1635 216 97 0 0 chrX 137696520 137696551 -28953745 + (TTC)n Simple_repeat Simple_repeat 3 33 0 2 1635 237 320 61 53 chrX 137696732 137696864 -28953432 + MIRc SINE MIR 75 207 -61 2 1635 291 196 0 0 chrX 137696869 137696915 -28953381 - MLT1N2 LTR MaLR 0 562 517 2 1635 369 0 0 0 chrX 137696923 137696964 -28953332 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 1635 660 309 5 5 chrX 137696968 137697163 -28953133 - MER58A DNA MER1_type 0 224 30 2 1635 395 335 45 99 chrX 137697287 137697509 -28952787 - MLT1N2 LTR MaLR -348 214 5 2 1635 378 316 7 63 chrX 137698074 137698216 -28952080 + Charlie4z DNA MER1_type 15 148 -19 2 1635 236 88 214 101 chrX 137698247 137698336 -28951960 + Charlie7 DNA MER1_type 2464 2562 -50 2 1635 860 202 48 57 chrX 137698455 137698665 -28951631 - B3 SINE B2 -6 210 3 2 1635 350 294 65 22 chrX 137701324 137701484 -28948812 - L2a LINE L2 0 3426 3239 2 1635 198 367 93 17 chrX 137701709 137701881 -28948415 + L2c LINE L2 3198 3382 -5 2 1635 204 188 0 0 chrX 137703146 137703178 -28947118 + polypurine Low_complexity Low_complexity 1 32 0 2 1635 239 287 67 50 chrX 137703892 137704017 -28946279 + MIR3 SINE MIR 74 197 -79 2 1635 22 0 0 0 chrX 137704085 137704107 -28946189 + AT_rich Low_complexity Low_complexity 1 22 0 2 1635 1190 263 117 8 chrX 137704181 137704607 -28945689 + MTD LTR MaLR 12 416 -3 2 1635 324 308 139 23 chrX 137704607 137704686 -28945610 + MT2A LTR ERVL 145 248 -285 2 1635 406 318 15 60 chrX 137704675 137704809 -28945487 + MT2A LTR ERVL 299 426 -107 2 1635 342 0 0 0 chrX 137704832 137704870 -28945426 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1635 6067 103 33 1 chrX 137705298 137706271 -28944025 - Lx3A LINE L1 -1017 5964 4950 2 1635 433 33 0 16 chrX 137706270 137706331 -28943965 + Lx3B LINE L1 6121 6180 -793 2 1635 2731 94 47 16 chrX 137706341 137706728 -28943568 + Lx3_Mus LINE L1 6595 6993 -16 2 1635 727 39 29 0 chrX 137706732 137706834 -28943462 + (GAAA)n Simple_repeat Simple_repeat 2 106 0 2 1635 291 85 0 0 chrX 137706841 137706888 -28943408 + (TGGA)n Simple_repeat Simple_repeat 2 48 0 2 1635 323 194 91 10 chrX 137708252 137708351 -28941945 + L1M5 LINE L1 4117 4223 -1923 2 1635 407 125 0 0 chrX 137708350 137708414 -28941882 + Lx3A LINE L1 5107 5170 -716 2 1635 2280 85 19 13 chrX 137708414 137708725 -28941571 + L1_Mus4 LINE L1 6307 6619 -17 2 1635 21 36 0 0 chrX 137708787 137708815 -28941481 + AT_rich Low_complexity Low_complexity 1 28 0 2 1635 9124 117 21 3 chrX 137709123 137710794 -28939502 + Lx3A LINE L1 5270 6973 -8 2 1635 214 160 40 0 chrX 137710801 137710851 -28939445 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 2 1635 948 93 0 0 chrX 137711071 137711221 -28939075 + (CCCTAA)n Simple_repeat Simple_repeat 6 155 0 2 1635 273 241 76 0 chrX 137711222 137711301 -28938995 - MER3 DNA MER1_type -112 97 13 2 1635 368 289 171 8 chrX 137711392 137711521 -28938775 - MIR3 SINE MIR -21 187 38 2 1635 519 297 36 0 chrX 137712584 137712722 -28937574 + B1F SINE Alu 1 143 -6 2 1635 189 147 0 0 chrX 137712737 137712771 -28937525 + (CCAA)n Simple_repeat Simple_repeat 1 34 0 2 1635 1277 194 0 18 chrX 137713140 137713360 -28936936 + B3 SINE B2 1 216 0 2 1635 312 324 19 29 chrX 137713741 137713846 -28936450 - MER5B DNA MER1_type -64 114 11 2 1635 1168 83 0 7 chrX 137714062 137714207 -28936089 - B1_Mus1 SINE Alu -3 145 2 2 1635 2253 53 28 3 chrX 137714220 137714503 -28935793 - L1_Mus3 LINE L1 -3 6635 6346 2 1635 546 82 0 0 chrX 137714504 137714577 -28935719 - Lx LINE L1 -527 6127 6055 2 1635 1226 114 0 0 chrX 137714575 137714751 -28935545 - L1_Mm LINE L1 -681 5202 5027 2 1635 3461 95 22 0 chrX 137714756 137715220 -28935076 + L1_Mus3 LINE L1 6165 6638 0 2 1635 207 0 0 0 chrX 137715226 137715249 -28935047 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1635 727 35 0 0 chrX 137715250 137715337 -28934959 + L1_Mus3 LINE L1 5860 5946 -692 2 1635 292 296 233 44 chrX 137715337 137715517 -28934779 - B4A SINE B4 -78 214 1 2 1635 288 0 0 0 chrX 137715527 137715559 -28934737 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1635 540 19 0 1 chrX 137715624 137715684 -28934612 + L1_Mm LINE L1 5528 5589 -297 2 1635 8668 45 1 4 chrX 137715684 137716681 -28933615 + L1Md_F2 LINE L1 5588 6581 -1 2 1635 378 0 0 0 chrX 137716853 137716895 -28933401 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 1635 276 30 0 0 chrX 137716895 137716927 -28933369 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1635 275 122 0 0 chrX 137716952 137716993 -28933303 - Lx8 LINE L1 -1585 5888 5848 3 1635 3205 56 3 0 chrX 137717036 137717413 -28932883 + L1_Mus1 LINE L1 6188 6565 -2 3 1635 243 246 43 58 chrX 137717638 137717707 -28932589 + MER5B DNA MER1_type 111 178 0 3 1635 253 293 12 24 chrX 137717739 137717823 -28932473 - MER117 DNA MER1_type -40 157 75 3 1635 363 284 0 79 chrX 137718076 137718202 -28932094 - PB1D10 SINE Alu 0 117 2 3 1635 8898 66 1 1 chrX 137718498 137719634 -28930662 - L1Md_F2 LINE L1 -884 4999 3864 3 1635 4854 65 3 0 chrX 137719629 137720245 -28930051 + L1Md_F2 LINE L1 4969 5586 -297 3 1635 8216 67 3 3 chrX 137720246 137721241 -28929055 + L1Md_F2 LINE L1 5588 6582 0 3 1635 399 21 0 0 chrX 137721779 137721827 -28928469 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1635 289 377 29 23 chrX 137721831 137722002 -28928294 + MER5A DNA MER1_type 17 188 -1 3 1635 240 188 12 48 chrX 137722030 137722114 -28928182 + (TATAA)n Simple_repeat Simple_repeat 2 82 0 3 1635 217 248 95 36 chrX 137722192 137722283 -28928013 - L2a LINE L2 -55 3371 3238 3 1635 533 341 22 22 chrX 137722942 137723167 -28927129 - Tigger13a DNA MER2_type -542 229 5 3 1635 369 295 95 12 chrX 137723279 137723447 -28926849 - MIR SINE MIR 0 262 81 3 1635 1379 21 10 38 chrX 137724672 137725181 -28925115 + (TTCTC)n Simple_repeat Simple_repeat 1 494 0 3 1635 186 43 0 0 chrX 137725185 137725208 -28925088 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1635 1116 84 0 0 chrX 137725208 137725345 -28924951 - B1_Mus2 SINE Alu -4 143 7 3 1635 390 139 0 0 chrX 137725513 137725599 -28924697 + (TC)n Simple_repeat Simple_repeat 1 86 0 3 1635 252 0 0 0 chrX 137725599 137725627 -28924669 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 1635 2960 62 17 24 chrX 137725735 137726152 -28924144 + Lx3_Mus LINE L1 6596 7009 0 3 1635 208 345 91 41 chrX 137726284 137726405 -28923891 + MIRc SINE MIR 48 174 -94 3 1635 378 306 24 16 chrX 137726469 137726595 -28923701 + MLT1H LTR MaLR 81 207 -342 3 1635 842 65 0 8 chrX 137726832 137726955 -28923341 + (TC)n Simple_repeat Simple_repeat 1 122 0 3 1635 737 139 29 7 chrX 137727978 137728116 -28922180 + URR1A DNA MER1_type 85 225 -1 3 1635 4647 53 3 26 chrX 137728300 137728904 -28921392 - L1_Mus1 LINE L1 0 6567 5978 3 1635 213 39 0 0 chrX 137729106 137729132 -28921164 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 3 1635 564 15 0 0 chrX 137729236 137729301 -28920995 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 1635 774 133 8 15 chrX 137729305 137729435 -28920861 - B1_Mus2 SINE Alu -7 140 12 3 1635 25 31 0 0 chrX 137729613 137729645 -28920651 + AT_rich Low_complexity Low_complexity 1 32 0 3 1635 202 301 152 76 chrX 137729856 137730014 -28920282 + MER5B DNA MER1_type 9 178 0 3 1635 277 301 122 17 chrX 137730228 137730343 -28919953 - MLT1E1A LTR MaLR -7 647 521 3 1635 1112 329 70 42 chrX 137730348 137730891 -28919405 - MER74A LTR ERVL 0 558 1 3 1635 390 281 102 0 chrX 137730930 137731058 -28919238 - MLT1E1A LTR MaLR -196 484 344 3 1635 296 278 164 16 chrX 137731147 137731275 -28919021 - MLT1E1A LTR MaLR -501 153 7 3 1635 258 32 0 0 chrX 137731326 137731357 -28918939 + (GA)n Simple_repeat Simple_repeat 1 31 0 3 1635 24 53 0 0 chrX 137731400 137731438 -28918858 + AT_rich Low_complexity Low_complexity 1 38 0 3 1635 517 216 136 0 chrX 137733413 137733538 -28916758 + B1_Mur1 SINE Alu 2 143 -6 3 1635 477 0 0 0 chrX 137733541 137733594 -28916702 + (GAAA)n Simple_repeat Simple_repeat 1 53 0 3 1635 5789 49 3 1 chrX 137734430 137735143 -28915153 + L1Md_F2 LINE L1 5867 6580 -2 3 1635 210 91 0 0 chrX 137735157 137735190 -28915106 + (TAAAAA)n Simple_repeat Simple_repeat 2 34 0 3 1635 277 254 0 27 chrX 137736455 137736528 -28913768 + MLT1J LTR MaLR 37 107 -405 3 1635 225 0 0 0 chrX 137736542 137736567 -28913729 + (TATG)n Simple_repeat Simple_repeat 4 28 0 3 1635 378 225 0 36 chrX 137736576 137736659 -28913637 - RSINE1 SINE B4 -24 141 62 3 1635 1400 254 73 16 chrX 137737544 137737916 -28912380 + MTD LTR MaLR 10 402 -17 3 1635 584 233 105 33 chrX 137738137 137738443 -28911853 - L1MEc LINE L1 -5332 1068 741 3 1635 912 309 63 40 chrX 137738509 137739082 -28911214 - L1MEc LINE L1 -5778 622 37 3 1635 318 299 0 0 chrX 137739083 137739170 -28911126 + MLT1J LTR MaLR 419 505 -7 3 1635 234 197 32 32 chrX 137739517 137739580 -28910716 + L1MEc LINE L1 431 493 -5907 3 1635 418 241 145 52 chrX 137739859 137740148 -28910148 + L1MC4 LINE L1 7331 7646 -396 3 1635 402 39 0 0 chrX 137740310 137740362 -28909934 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1635 423 0 0 0 chrX 137740363 137740410 -28909886 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 1635 1786 188 9 9 chrX 137740558 137740885 -28909411 + RMER15 LTR ERVL 1 327 -248 3 1635 365 248 8 8 chrX 137740910 137741032 -28909264 - L1M2 LINE L1 -790 5353 5232 3 1635 1383 25 0 0 chrX 137741079 137741242 -28909054 + (TCTCCC)n Simple_repeat Simple_repeat 6 168 0 3 1635 684 275 15 0 chrX 137741263 137741394 -28908902 - B3A SINE B2 -41 157 25 3 1635 1102 90 0 0 chrX 137741964 137742108 -28908188 - B1_Mm SINE Alu -3 144 1 3 1635 187 373 0 15 chrX 137742571 137742639 -28907657 + MIR SINE MIR 15 81 -181 3 1635 216 0 0 0 chrX 137743263 137743287 -28907009 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 1635 259 143 0 0 chrX 137743288 137743330 -28906966 - Lx2B LINE L1 -509 6491 6450 3 1635 1313 224 7 0 chrX 137743330 137743607 -28906689 - Lx2A1 LINE L1 -617 6391 6113 3 1635 257 276 34 25 chrX 137743601 137743720 -28906576 - L1_Mur2 LINE L1 -2988 2889 2770 3 1635 474 65 0 0 chrX 137743739 137743801 -28906495 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 1635 5383 198 87 13 chrX 137744119 137745367 -28904929 + Lx9 LINE L1 6303 7643 -1 3 1635 195 100 0 0 chrX 137745378 137745408 -28904888 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 3 1635 244 207 107 41 chrX 137745415 137745536 -28904760 + Charlie5 DNA MER1_type 2388 2516 -108 3 1635 466 288 9 0 chrX 137745662 137745773 -28904523 + PB1D7 SINE Alu 9 120 0 3 1635 4082 96 3 17 chrX 137745801 137746376 -28903920 + RMER2 LTR ERV1 1 567 0 3 1635 180 0 0 0 chrX 137746471 137746491 -28903805 + (CTA)n Simple_repeat Simple_repeat 3 22 0 3 1635 312 319 0 0 chrX 137746823 137746939 -28903357 + L1MB7 LINE L1 6053 6168 -16 3 1635 870 140 0 0 chrX 137747250 137747429 -28902867 + (TCTA)n Simple_repeat Simple_repeat 1 179 0 3 1635 208 258 194 0 chrX 137748848 137748910 -28901386 - MIRb SINE MIR -13 255 182 3 1635 558 0 0 0 chrX 137749115 137749177 -28901119 + (TTTTC)n Simple_repeat Simple_repeat 4 65 0 3 1635 818 232 80 91 chrX 137749179 137749378 -28900918 - B3 SINE B2 -19 197 1 3 1635 230 370 30 0 chrX 137749601 137749701 -28900595 - MIRb SINE MIR -56 212 110 3 1635 402 294 209 11 chrX 137749715 137749897 -28900399 - MER20 DNA MER1_type 0 219 2 3 1635 190 303 35 106 chrX 137749901 137749986 -28900310 - MIRb SINE MIR -175 93 8 3 1635 282 206 0 0 chrX 137750169 137750232 -28900064 + CT-rich Low_complexity Low_complexity 3 65 0 3 1635 190 360 27 0 chrX 137750336 137750411 -28899885 + MIR3 SINE MIR 115 191 -17 3 1635 1432 236 52 41 chrX 137753820 137754208 -28896088 - Lx5 LINE L1 -44 7006 6615 3 1635 1844 173 116 10 chrX 137754208 137754622 -28895674 + RCHARR1 DNA MER1_type 243 700 -274 3 1635 708 280 249 5 chrX 137754625 137754881 -28895415 - MTEb LTR MaLR -3 376 60 3 1635 693 174 70 25 chrX 137754897 137755098 -28895198 + RCHARR1 DNA MER1_type 699 908 -66 3 1635 2014 163 73 8 chrX 137755159 137755530 -28894766 - MTC LTR MaLR -26 395 1 3 1635 262 338 0 27 chrX 137756519 137756592 -28893704 + ID4 SINE ID 4 74 -9 3 1635 360 0 0 0 chrX 137756594 137756634 -28893662 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 3 1636 25 0 0 0 chrX 137758523 137758548 -28891748 + AT_rich Low_complexity Low_complexity 1 25 0 3 1636 288 0 0 0 chrX 137760255 137760287 -28890009 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1636 678 259 0 0 chrX 137760530 137760669 -28889627 + RSINE1 SINE B4 2 140 -25 3 1636 313 287 123 0 chrX 137760809 137760931 -28889365 + MIR3 SINE MIR 65 201 -7 3 1636 3244 253 36 12 chrX 137762918 137763730 -28886566 + RCHARR1 DNA MER1_type 22 852 -122 3 1636 2853 125 0 18 chrX 137763757 137764198 -28886098 - Lx3A LINE L1 -4 6977 6545 3 1636 1731 43 35 4 chrX 137764729 137764960 -28885336 - L1Md_F3 LINE L1 0 6584 6347 3 1636 971 62 0 0 chrX 137764960 137765089 -28885207 + L1Md_F3 LINE L1 6205 6333 -251 3 1636 2652 60 9 0 chrX 137765933 137766268 -28884028 + L1_Mus1 LINE L1 6229 6566 -1 3 1636 2048 253 53 112 chrX 137766575 137767558 -28882738 + RMER17B LTR ERVK 2 926 -32 3 1636 314 263 53 0 chrX 137767906 137767982 -28882314 + ID4_ SINE ID 3 82 -1 3 1636 252 287 94 17 chrX 137768029 137768146 -28882150 - MER20B DNA MER1_type -169 614 489 3 1636 323 226 83 0 chrX 137768269 137768353 -28881943 - MER20B DNA MER1_type -483 300 210 3 1636 7460 236 42 36 chrX 137769033 137769392 -28880904 + L1_Mur3 LINE L1 885 1245 -6483 3 1636 419 52 0 0 chrX 137769392 137769450 -28880846 + L1_Mus2 LINE L1 6509 6566 0 3 1636 7460 179 81 12 chrX 137769450 137771127 -28879169 + L1_Mur3 LINE L1 1246 3041 -2836 3 1636 1135 31 0 0 chrX 137771128 137771258 -28879038 + B1_Mus2 SINE Alu 5 134 -13 3 1636 225 0 0 0 chrX 137771258 137771283 -28879013 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 3 1636 2995 54 10 8 chrX 137771307 137771701 -28878595 - MTA_Mm LTR MaLR 0 396 2 3 1636 1291 175 74 19 chrX 137771701 137772079 -28878217 + L1_Mur3 LINE L1 3103 3501 -2379 3 1636 2033 71 10 3 chrX 137772071 137772380 -28877916 + MusHAL1 LINE L1 1966 2276 -436 3 1636 5147 98 44 30 chrX 137772376 137773608 -28876688 + L1_Mus2 LINE L1 5310 6566 0 3 1636 2857 61 37 14 chrX 137773623 137774054 -28876242 + MusHAL1 LINE L1 2268 2708 -4 3 1636 216 333 18 73 chrX 137774057 137774078 -28876218 + B1F SINE Alu 42 78 -71 3 1636 256 278 0 0 chrX 137774078 137774132 -28876164 + ID_B1 SINE B4 142 195 -29 3 1636 216 333 18 73 chrX 137774132 137774167 -28876129 + B1F SINE Alu 79 145 -4 3 1636 2320 150 57 200 chrX 137774180 137774515 -28875781 + L1_Mur2 LINE L1 3738 4080 -1797 3 1636 1048 77 0 7 chrX 137774515 137774658 -28875638 - B1_Mm SINE Alu 0 147 6 3 1636 2320 150 57 200 chrX 137774658 137775045 -28875251 + L1_Mur2 LINE L1 4081 4478 -1399 3 1636 1084 65 7 0 chrX 137775043 137775196 -28875100 - L1_Mm LINE L1 -1539 4344 4191 3 1636 257 312 148 7 chrX 137775719 137775874 -28874422 - MIRc SINE MIR -89 179 3 4 1636 382 236 159 37 chrX 137776516 137776679 -28873617 + MER53 DNA hAT 11 193 0 4 1636 933 137 231 0 chrX 137776847 137777029 -28873267 + URR1B DNA MER1_type 2 225 0 4 1636 460 308 55 20 chrX 137777468 137777614 -28872682 + B4A SINE B4 2 152 -140 4 1636 1071 89 16 27 chrX 137777698 137777882 -28872414 + L1_Mus3 LINE L1 6456 6637 -1 4 1636 459 224 0 0 chrX 137778000 137778107 -28872189 + (TA)n Simple_repeat Simple_repeat 1 107 0 4 1636 1182 118 19 33 chrX 137778434 137778644 -28871652 + Lx2A LINE L1 6801 7007 -1 4 1636 422 211 181 14 chrX 137778661 137778812 -28871484 + B3 SINE B2 27 191 -4 4 1636 1276 259 76 9 chrX 137779016 137779359 -28870937 + ORR1D2 LTR MaLR 1 366 -4 4 1636 275 300 207 19 chrX 137780272 137780581 -28869715 + L1MA4A LINE L1 5525 5891 -412 4 1636 4635 78 149 7 chrX 137780633 137781330 -28868966 - L1_Mus3 LINE L1 -2 6636 5841 4 1636 7203 76 1 2 chrX 137781326 137782278 -28868018 + L1Md_F2 LINE L1 5632 6582 0 4 1636 811 169 87 6 chrX 137782286 137782459 -28867837 + B2_Mm2 SINE B2 2 188 -7 4 1636 4813 197 55 29 chrX 137782483 137783100 -28867196 + Lx6 LINE L1 4638 5233 -647 4 1636 6556 30 10 6 chrX 137783100 137783900 -28866396 + L1Md_F3 LINE L1 5781 6583 -1 4 1636 4813 201 90 16 chrX 137783900 137785255 -28865041 + Lx6 LINE L1 5234 6707 -753 4 1636 2035 232 102 67 chrX 137785261 137785889 -28864407 + Lx6 LINE L1 6810 7459 -1 4 1636 576 0 0 0 chrX 137786165 137786229 -28864067 + (TC)n Simple_repeat Simple_repeat 1 64 0 4 1636 372 293 43 22 chrX 137786459 137786644 -28863652 + L1M5 LINE L1 3411 3599 -2547 4 1636 364 298 7 30 chrX 137786984 137787119 -28863177 + L1M5 LINE L1 3756 3887 -2259 4 1636 198 0 0 0 chrX 137787211 137787233 -28863063 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 1636 327 333 50 38 chrX 137787344 137787677 -28862619 + L1M5 LINE L1 4771 5109 -1037 4 1636 1613 230 26 32 chrX 137787744 137787885 -28862411 + MTEb LTR MaLR 3 148 -231 4 1636 1403 189 178 11 chrX 137787885 137788244 -28862052 + MTD LTR MaLR 1 419 0 4 1636 1613 230 26 32 chrX 137788244 137788479 -28861817 + MTEb LTR MaLR 149 377 -2 4 1636 25 0 0 0 chrX 137788636 137788661 -28861635 + AT_rich Low_complexity Low_complexity 1 25 0 4 1636 1121 126 0 3 chrX 137788983 137789351 -28860945 + (CA)n Simple_repeat Simple_repeat 1 366 0 4 1636 244 253 120 54 chrX 137789445 137789629 -28860667 + L1MC5 LINE L1 7039 7234 -727 4 1636 315 340 105 59 chrX 137789833 137789986 -28860310 - RSINE1 SINE B4 -4 161 2 4 1636 578 280 82 42 chrX 137790292 137790646 -28859650 - L1_Rod LINE L1 -19 5828 5461 4 1636 1564 209 23 6 chrX 137791788 137792134 -28858162 + Lx LINE L1 6466 6817 -827 4 1636 7128 101 7 1 chrX 137792116 137793481 -28856815 + Lx LINE L1 5280 6654 0 4 1636 408 343 83 73 chrX 137793518 137793807 -28856489 - B4 SINE B4 0 292 1 4 1636 487 272 41 53 chrX 137793829 137794000 -28856296 - MLT2D LTR ERVL -218 196 28 4 1636 198 268 11 99 chrX 137794833 137794924 -28855372 - MIRb SINE MIR -68 200 118 4 1636 3282 122 44 4 chrX 137795195 137795746 -28854550 - Lx4A LINE L1 -622 6436 5864 4 1636 3793 128 16 23 chrX 137795747 137796352 -28853944 + Lx4A LINE L1 6448 7050 -8 4 1636 234 0 0 0 chrX 137796352 137796378 -28853918 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 4 1636 465 154 0 0 chrX 137796647 137796757 -28853539 + (CCTA)n Simple_repeat Simple_repeat 4 113 0 4 1636 303 93 0 0 chrX 137796971 137797014 -28853282 + (CG)n Simple_repeat Simple_repeat 2 44 0 4 1636 227 209 0 0 chrX 137797063 137797106 -28853190 - L1M4 LINE L1 -546 5628 5586 4 1636 24 32 0 0 chrX 137798592 137798623 -28851673 + AT_rich Low_complexity Low_complexity 1 31 0 4 1636 740 11 11 0 chrX 137799102 137799191 -28851105 + (TC)n Simple_repeat Simple_repeat 2 91 0 4 1636 823 19 0 0 chrX 137799491 137799599 -28850697 - L1Md_T LINE L1 0 6582 6475 4 1636 204 188 0 0 chrX 137799941 137799973 -28850323 + (TCCA)n Simple_repeat Simple_repeat 2 33 0 4 1636 567 220 12 85 chrX 137800050 137800190 -28850106 + MER3 DNA MER1_type 8 137 -72 4 1636 424 262 0 0 chrX 137800190 137800270 -28850026 - ID4_ SINE ID -2 81 2 4 1636 567 220 12 85 chrX 137800270 137800293 -28850003 + MER3 DNA MER1_type 138 159 -50 4 1636 396 287 83 39 chrX 137800317 137800481 -28849815 - L1M2 LINE L1 -954 4893 4725 4 1636 267 31 0 0 chrX 137800481 137800513 -28849783 + (TTG)n Simple_repeat Simple_repeat 2 33 0 4 1636 454 224 65 8 chrX 137800513 137800660 -28849636 - L1M2 LINE L1 -1372 4771 4569 4 1636 449 92 30 10 chrX 137800863 137800962 -28849334 + (TA)n Simple_repeat Simple_repeat 1 101 0 4 1636 1527 304 89 35 chrX 137801026 137802593 -28847703 - L1M2 LINE L1 -192 5688 4033 4 1636 628 285 13 7 chrX 137802639 137802791 -28847505 - RSINE1 SINE B4 -7 158 6 4 1636 743 300 22 4 chrX 137802794 137803068 -28847228 - L1M2 LINE L1 -2065 4078 3800 4 1636 299 274 8 109 chrX 137803089 137803208 -28847088 - PB1D10 SINE Alu -10 107 1 4 1636 374 186 34 95 chrX 137803278 137803426 -28846870 + Lx4B LINE L1 6916 7054 -4 4 1636 1672 87 47 8 chrX 137803532 137803788 -28846508 + L1Md_F2 LINE L1 6317 6582 0 4 1636 274 275 17 76 chrX 137804515 137804633 -28845663 + MamRep605 Unknown Unknown 90 200 -676 4 1636 431 357 87 41 chrX 137804784 137805175 -28845121 + MamRep605 Unknown Unknown 238 646 -230 4 1636 22 35 0 0 chrX 137805187 137805216 -28845080 + AT_rich Low_complexity Low_complexity 1 29 0 4 1636 1068 266 74 55 chrX 137805220 137805826 -28844470 - Lx9 LINE L1 0 7644 6885 4 1636 791 249 98 0 chrX 137805845 137806038 -28844258 - B3 SINE B2 -4 212 1 4 1636 285 75 0 0 chrX 137806094 137806134 -28844162 + (CAA)n Simple_repeat Simple_repeat 2 41 0 4 1636 288 0 0 0 chrX 137806697 137806729 -28843567 + (TC)n Simple_repeat Simple_repeat 1 32 0 4 1636 374 356 85 37 chrX 137807429 137807728 -28842568 + L2a LINE L2 2820 3145 -281 4 1636 708 279 14 59 chrX 137807728 137807949 -28842347 - ID_B1 SINE B4 -13 211 1 4 1636 343 382 112 34 chrX 137807949 137808211 -28842085 + L2a LINE L2 3146 3419 -7 4 1636 490 274 64 25 chrX 137808796 137808953 -28841343 + RSINE1 SINE B4 3 165 0 4 1636 462 18 0 0 chrX 137809106 137809161 -28841135 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1636 355 289 0 0 chrX 137809923 137810006 -28840290 - L2a LINE L2 -6 3420 3338 4 1636 222 347 94 66 chrX 137810132 137810213 -28840083 + MIRb SINE MIR 4 87 -181 4 1636 1293 118 108 0 chrX 137810213 137810417 -28839879 - URR1A DNA MER1_type 0 226 1 4 1636 222 347 94 66 chrX 137810417 137810548 -28839748 + MIRb SINE MIR 88 222 -46 4 1636 229 259 17 0 chrX 137810611 137810669 -28839627 + MIRc SINE MIR 97 155 -113 4 1636 402 338 25 31 chrX 137810779 137810938 -28839358 + B3 SINE B2 42 199 -17 4 1636 258 315 18 97 chrX 137811236 137811401 -28838895 - RMER4B LTR ERVK -399 186 35 4 1636 239 226 143 16 chrX 137812158 137812221 -28838075 - ID4 SINE ID -9 74 4 4 1636 3535 217 48 40 chrX 137812998 137814003 -28836293 + Lx9 LINE L1 6632 7644 0 4 1636 222 318 11 42 chrX 137814008 137814123 -28836173 + MIRb SINE MIR 146 253 -9 4 1636 431 293 92 43 chrX 137814256 137814420 -28835876 - MER5B DNA MER1_type -6 172 1 4 1636 787 151 78 21 chrX 137815103 137815245 -28835051 - B1_Mur4 SINE Alu 0 150 1 4 1636 761 164 48 35 chrX 137815593 137815722 -28834574 + B1_Mur2 SINE Alu 3 137 -12 4 1636 207 0 0 0 chrX 137815722 137815745 -28834551 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 1636 761 164 48 35 chrX 137815745 137815760 -28834536 + B1_Mur2 SINE Alu 138 149 0 4 1636 24 0 0 0 chrX 137815927 137815951 -28834345 + AT_rich Low_complexity Low_complexity 1 24 0 4 1636 533 264 0 9 chrX 137815963 137816074 -28834222 + B1_Mur1 SINE Alu 38 147 -2 4 1636 481 128 0 0 chrX 137817341 137817419 -28832877 - Lx9 LINE L1 -176 7468 7391 4 1636 2163 232 52 35 chrX 137817415 137817668 -28832628 - Lx9 LINE L1 -697 6947 6695 4 1636 1232 233 128 18 chrX 137817668 137818005 -28832291 + ORR1D1 LTR MaLR 1 374 0 4 1636 2163 232 52 35 chrX 137818005 137818322 -28831974 - Lx9 LINE L1 -950 6694 6367 4 1636 490 297 65 7 chrX 137818422 137818561 -28831735 - RSINE1 SINE B4 -17 148 2 4 1636 190 240 40 0 chrX 137818576 137818626 -28831670 - MIR SINE MIR -122 140 89 4 1636 423 336 14 14 chrX 137820370 137820518 -28829778 + MER63B DNA AcHobo 287 434 -2 4 1636 680 246 143 14 chrX 137820764 137820987 -28829309 + MIR SINE MIR 11 262 0 4 1636 254 306 0 96 chrX 137821297 137821391 -28828905 - MIRc SINE MIR -124 144 60 4 1636 474 18 0 0 chrX 137821518 137821573 -28828723 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1636 261 300 9 57 chrX 137821581 137821687 -28828609 + B1_Mur3 SINE Alu 48 148 -1 4 1636 325 309 42 0 chrX 137821878 137821991 -28828305 + B1F1 SINE Alu 1 117 0 4 1636 4853 105 27 22 chrX 137822148 137822881 -28827415 + Lx3A LINE L1 6242 6978 -3 4 1636 371 225 11 22 chrX 137822978 137823069 -28827227 + MER5A DNA MER1_type 18 107 -82 4 1636 414 0 0 0 chrX 137824825 137824871 -28825425 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 1636 195 350 0 0 chrX 137826451 137826511 -28823785 - MIRb SINE MIR -4 264 205 4 1636 491 187 22 0 chrX 137826567 137826658 -28823638 + Lx9 LINE L1 6554 6646 -998 4 1636 2272 72 0 13 chrX 137826667 137826978 -28823318 + L1Md_F2 LINE L1 6276 6582 0 4 1636 23 0 0 0 chrX 137826978 137827001 -28823295 + AT_rich Low_complexity Low_complexity 1 23 0 4 1636 231 88 0 0 chrX 137827146 137827180 -28823116 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1636 472 174 8 17 chrX 137827194 137827311 -28822985 + GA-rich Low_complexity Low_complexity 3 118 0 4 1636 410 271 9 36 chrX 137827341 137827452 -28822844 + PB1D9 SINE Alu 3 110 -10 4 1636 442 281 27 61 chrX 137827522 137827670 -28822626 + B1F SINE Alu 7 149 0 4 1636 262 308 15 15 chrX 137827778 137827844 -28822452 + ID4_ SINE ID 16 81 -2 4 1636 290 235 52 63 chrX 137827880 137828071 -28822225 - RMER17D LTR ERVK -476 413 225 4 1636 480 99 0 0 chrX 137828630 137828701 -28821595 + (CA)n Simple_repeat Simple_repeat 2 72 0 4 1636 422 347 15 35 chrX 137830177 137830380 -28819916 - MIRb SINE MIR -65 203 5 4 1636 306 107 0 0 chrX 137830619 137830675 -28819621 + (T)n Simple_repeat Simple_repeat 1 56 0 4 1636 228 218 18 0 chrX 137832099 137832154 -28818142 - AmnSINE1 SINE SINE -1 574 519 4 1636 245 250 0 0 chrX 137832671 137832731 -28817565 + GA-rich Low_complexity Low_complexity 1 60 0 4 1636 608 323 48 14 chrX 137833017 137833306 -28816990 - L3 LINE CR1 -104 4385 4087 5 1636 1059 108 0 0 chrX 137833402 137833560 -28816736 - Lx LINE L1 -580 6074 5917 5 1636 3623 117 34 4 chrX 137833561 137834117 -28816179 + Lx LINE L1 6076 6648 -6 5 1636 629 126 9 0 chrX 137834283 137834394 -28815902 + (GGA)n Simple_repeat Simple_repeat 3 114 0 5 1636 1114 230 55 45 chrX 137834745 137835067 -28815229 - MTC LTR MaLR -23 398 92 5 1636 5066 199 87 5 chrX 137835078 137836161 -28814135 - Lx9 LINE L1 0 7644 6473 5 1636 226 256 0 0 chrX 137836161 137836204 -28814092 + LTR83 LTR ERVL 8 50 -730 5 1636 433 218 19 38 chrX 137836222 137836327 -28813969 - Lx9 LINE L1 -1234 6410 6308 5 1636 457 211 0 0 chrX 137836381 137836471 -28813825 - MTC LTR MaLR -319 102 13 5 1636 270 286 24 0 chrX 137837912 137837996 -28812300 - MER5A1 DNA MER1_type -4 162 77 5 1636 607 212 100 0 chrX 137839076 137839236 -28811060 - B2_Mm2 SINE B2 -19 176 1 5 1636 31837 100 16 1 chrX 137839550 137845483 -28804813 + L1_Mus1 LINE L1 542 6567 0 5 1636 6378 85 93 28 chrX 137845715 137846493 -28803803 - L1_Mus3 LINE L1 0 6638 5774 5 1636 1168 42 7 0 chrX 137846493 137846637 -28803659 + B1_Mm SINE Alu 1 145 -2 5 1636 6378 95 45 34 chrX 137846637 137847188 -28803108 - L1_Mus3 LINE L1 -110 5773 5234 5 1636 242 29 0 28 chrX 137847188 137847224 -28803072 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 1636 4702 101 16 37 chrX 137847224 137847306 -28802990 - L1_Mus3 LINE L1 -650 5233 5152 5 1636 211 342 12 12 chrX 137847426 137847459 -28802837 - RSINE1 SINE B4 0 165 132 5 1636 405 0 0 0 chrX 137847459 137847504 -28802792 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1636 211 342 12 12 chrX 137847504 137847550 -28802746 - RSINE1 SINE B4 -34 131 86 5 1636 930 174 0 0 chrX 137847967 137848116 -28802180 - B1_Mur4 SINE Alu -1 149 1 5 1636 234 0 0 0 chrX 137849222 137849248 -28801048 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 1636 357 24 0 0 chrX 137849248 137849289 -28801007 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1636 246 387 63 16 chrX 137849603 137849729 -28800567 - L1MC LINE L1 -2257 5625 5494 5 1636 250 314 35 93 chrX 137850963 137851135 -28799161 + RMER4A LTR ERVK 25 186 -280 5 1636 3727 273 90 24 chrX 137851910 137852473 -28797823 - Tigger1 DNA MER2_type -13 2405 1805 5 1636 1348 65 33 0 chrX 137852473 137852657 -28797639 + B2_Mm1a SINE B2 4 193 0 5 1636 3727 273 90 24 chrX 137852657 137853285 -28797011 - Tigger1 DNA MER2_type -614 1804 1135 5 1636 926 114 32 102 chrX 137853285 137853471 -28796825 + ORR1D1 LTR MaLR 1 173 -201 5 1636 306 0 0 0 chrX 137853521 137853555 -28796741 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1636 265 155 86 0 chrX 137853560 137853618 -28796678 + ORR1D1 LTR MaLR 254 316 -13 5 1636 2895 197 43 24 chrX 137853621 137854258 -28796038 + RMER19A LTR ERVK 46 737 0 5 1636 2439 275 122 47 chrX 137854292 137854600 -28795696 - Tigger1 DNA MER2_type -1279 1139 848 5 1636 951 240 19 10 chrX 137854600 137854806 -28795490 + B3 SINE B2 1 208 -8 5 1636 2439 275 122 47 chrX 137854806 137855487 -28794809 - Tigger1 DNA MER2_type -1571 847 75 5 1636 181 420 59 0 chrX 137855528 137855647 -28794649 - MIRb SINE MIR -132 136 11 5 1636 203 219 43 118 chrX 137856271 137856364 -28793932 - MIR SINE MIR -157 105 20 5 1636 181 303 108 43 chrX 137857387 137857480 -28792816 - MIRc SINE MIR -146 122 24 5 1636 21 0 0 0 chrX 137859254 137859275 -28791021 + AT_rich Low_complexity Low_complexity 1 21 0 5 1636 269 235 108 24 chrX 137859318 137859401 -28790895 + PB1D10 SINE Alu 19 108 -9 5 1636 218 321 19 0 chrX 137859407 137859460 -28790836 + ID4_ SINE ID 15 68 -15 5 1636 381 43 0 0 chrX 137859472 137859519 -28790777 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1636 332 345 109 0 chrX 137859520 137859639 -28790657 - MLT1F LTR MaLR -81 467 336 5 1636 252 283 33 0 chrX 137859646 137859738 -28790558 - L1MA6 LINE L1 -5 6295 6201 5 1636 510 315 224 25 chrX 137859745 137860031 -28790265 - MLT1F LTR MaLR -205 343 1 5 1636 245 167 0 67 chrX 137860281 137860326 -28789970 - tRNA-Gly-GGA tRNA tRNA -31 44 3 5 1636 514 287 23 23 chrX 137860651 137860783 -28789513 - B1_Mur2 SINE Alu -16 133 2 5 1636 799 286 97 65 chrX 137860876 137861441 -28788855 + L1M2 LINE L1 4688 5270 -873 5 1636 1737 205 41 3 chrX 137861474 137861816 -28788480 - MTC LTR MaLR -62 359 5 5 1636 420 343 49 0 chrX 137861915 137862058 -28788238 + MER58A DNA MER1_type 4 153 -71 5 1636 2629 150 83 22 chrX 137862070 137862573 -28787723 + RLTR20C LTR ERVK 1 534 0 5 1636 277 310 40 0 chrX 137862937 137863037 -28787259 + PB1D10 SINE Alu 6 109 -8 5 1636 365 221 52 0 chrX 137863203 137863280 -28787016 - ID4 SINE ID -2 81 1 5 1636 198 208 0 0 chrX 137863458 137863506 -28786790 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 1636 2413 198 39 8 chrX 137863697 137864185 -28786111 + Lx5 LINE L1 6548 7050 0 5 1636 328 302 60 41 chrX 137864802 137864984 -28785312 + MIRb SINE MIR 22 216 -52 5 1636 274 372 97 36 chrX 137865255 137865503 -28784793 - MER102a DNA MER1_type -33 297 35 5 1636 400 292 47 13 chrX 137865531 137865680 -28784616 + MIR SINE MIR 71 224 -38 5 1636 2179 91 7 3 chrX 137865936 137866246 -28784050 - L1_Mus3 LINE L1 0 6638 6328 5 1636 849 150 0 0 chrX 137866441 137866588 -28783708 - Lx LINE L1 -8 6646 6500 5 1636 1132 246 65 5 chrX 137866930 137867236 -28783060 - ORR1D1 LTR MaLR -66 318 1 5 1636 3072 117 44 9 chrX 137867369 137867838 -28782458 + Lx4A LINE L1 6515 6982 -76 5 1636 435 95 0 0 chrX 137867950 137868024 -28782272 + (TC)n Simple_repeat Simple_repeat 1 74 0 5 1636 331 271 29 68 chrX 137868024 137868127 -28782169 - PB1D10 SINE Alu -5 112 14 5 1636 279 347 47 29 chrX 137868048 137868184 -28782112 - ID_B1 SINE B4 -55 169 34 5 1636 316 282 73 37 chrX 137868656 137868792 -28781504 + MLT1A1 LTR MaLR 268 408 0 5 1636 350 207 23 11 chrX 137869250 137869338 -28780958 - L1ME2 LINE L1 -196 5968 5880 5 1636 225 161 0 139 chrX 137869396 137869468 -28780828 + Lx4A LINE L1 6986 7047 -11 5 1636 240 35 0 0 chrX 137869468 137869497 -28780799 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 5 1636 510 329 35 0 chrX 137870135 137870278 -28780018 - ID_B1 SINE B4 -65 159 12 5 1636 183 80 0 0 chrX 137870282 137870307 -28779989 + (TTA)n Simple_repeat Simple_repeat 3 27 0 5 1636 606 279 0 29 chrX 137870475 137870615 -28779681 + B1_Mur1 SINE Alu 5 140 -9 5 1636 447 279 40 54 chrX 137870641 137870789 -28779507 - RSINE1 SINE B4 -18 147 2 5 1636 495 0 0 0 chrX 137871076 137871131 -28779165 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 1636 1156 30 0 0 chrX 137871131 137871265 -28779031 - B1_Mus1 SINE Alu -10 138 5 5 1636 26 0 0 0 chrX 137871406 137871432 -28778864 + AT_rich Low_complexity Low_complexity 1 26 0 5 1636 311 288 46 110 chrX 137872143 137872360 -28777936 + MTEb LTR MaLR 152 379 0 5 1636 42 65 0 0 chrX 137873042 137873119 -28777177 + AT_rich Low_complexity Low_complexity 1 77 0 5 1636 513 261 0 35 chrX 137873143 137873286 -28777010 - B3 SINE B2 0 216 79 5 1636 387 188 100 0 chrX 137873308 137873388 -28776908 - BC1_Mm scRNA scRNA -64 88 1 5 1636 241 206 56 102 chrX 137874300 137874408 -28775888 - Charlie4a DNA MER1_type -29 479 377 5 1636 829 169 21 7 chrX 137874622 137874765 -28775531 + B1_Mus2 SINE Alu 2 146 -1 5 1636 599 287 0 8 chrX 137875319 137875442 -28774854 + RSINE1 SINE B4 6 127 -38 5 1636 360 0 0 0 chrX 137875450 137875490 -28774806 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1636 387 0 0 0 chrX 137876125 137876168 -28774128 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1636 486 33 0 0 chrX 137876941 137877001 -28773295 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 1636 226 250 0 0 chrX 137877497 137877545 -28772751 + B3 SINE B2 73 120 -96 5 1636 399 21 0 0 chrX 137877547 137877595 -28772701 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1636 457 245 10 0 chrX 137878087 137878189 -28772107 - RMER15 LTR ERVL -103 472 370 5 1636 1529 241 45 28 chrX 137878470 137878892 -28771404 + Lx7 LINE L1 6818 7246 -450 5 1636 329 277 25 65 chrX 137878970 137879171 -28771125 + Lx7 LINE L1 7491 7683 -13 5 1636 360 265 48 0 chrX 137879661 137879808 -28770488 - L1M5 LINE L1 -2731 3415 3262 5 1636 310 320 71 25 chrX 137879830 137880025 -28770271 - L1M5 LINE L1 -2869 3277 3083 5 1636 780 203 0 35 chrX 137880171 137880314 -28769982 + B1_Mus2 SINE Alu 4 141 -6 5 1636 432 267 46 93 chrX 137880314 137880350 -28769946 + ID_B1 SINE B4 100 251 -41 5 1636 263 336 27 27 chrX 137880401 137880548 -28769748 - L1M5 LINE L1 -3337 2809 2663 5 1636 432 0 0 0 chrX 137881241 137881289 -28769007 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 1636 181 163 41 0 chrX 137882401 137882450 -28767846 + GA-rich Low_complexity Low_complexity 2 52 0 5 1636 182 333 89 70 chrX 137882679 137882837 -28767459 - MIRc SINE MIR -21 247 87 5 1636 239 275 0 92 chrX 137882847 137882923 -28767373 - ID4 SINE ID -4 79 11 5 1636 309 334 50 71 chrX 137884147 137884356 -28765940 - MIRb SINE MIR -39 229 10 5 1636 186 211 193 0 chrX 137884383 137884440 -28765856 - L3 LINE CR1 -2807 1682 1615 5 1637 343 291 0 44 chrX 137887784 137887874 -28762422 + ID_B1 SINE B4 131 216 -8 5 1637 1285 32 6 0 chrX 137887964 137888122 -28762174 + L1_Mus1 LINE L1 6409 6567 0 5 1637 435 83 0 0 chrX 137889643 137889703 -28760593 + (TA)n Simple_repeat Simple_repeat 1 60 0 5 1637 24 85 0 0 chrX 137889771 137889830 -28760466 + AT_rich Low_complexity Low_complexity 1 59 0 5 1637 249 196 0 0 chrX 137890311 137890362 -28759934 + CT-rich Low_complexity Low_complexity 3 53 0 5 1637 387 266 53 9 chrX 137890363 137890477 -28759819 - PB1D9 SINE Alu 0 120 2 5 1637 330 360 8 37 chrX 137890837 137890982 -28759314 + MIR SINE MIR 39 176 -92 5 1637 210 143 0 0 chrX 137891137 137891172 -28759124 + (GAAA)n Simple_repeat Simple_repeat 4 38 0 5 1637 1075 45 30 0 chrX 137891354 137891487 -28758809 + B1_Mus1 SINE Alu 3 139 -9 5 1637 578 165 8 0 chrX 137891508 137891635 -28758661 + CT-rich Low_complexity Low_complexity 2 129 0 5 1637 279 257 85 9 chrX 137892053 137892159 -28758137 + L1MC5 LINE L1 7820 7933 -28 5 1637 333 0 0 0 chrX 137893748 137893785 -28756511 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1637 301 235 0 29 chrX 137893920 137893990 -28756306 + MLT1I LTR MaLR 1 68 -343 6 1637 364 290 206 30 chrX 137894511 137894710 -28755586 + LFSINE_Vert SINE SINE 1 234 -225 6 1637 360 0 0 0 chrX 137894835 137894875 -28755421 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1637 351 0 0 0 chrX 137894875 137894913 -28755383 + (GA)n Simple_repeat Simple_repeat 2 40 0 6 1637 3844 70 27 15 chrX 137896089 137896614 -28753682 + L1Md_F2 LINE L1 6040 6570 -12 6 1637 241 229 0 16 chrX 137896617 137896679 -28753617 - Lx7 LINE L1 -17 7679 7619 6 1637 221 327 118 0 chrX 137896950 137897060 -28753236 - MIR SINE MIR -50 212 90 6 1637 281 406 30 8 chrX 137897609 137897743 -28752553 + MER91A DNA Tip100 18 154 -42 6 1637 313 267 7 124 chrX 137897743 137897880 -28752416 - MT2B LTR ERVL -313 288 168 6 1637 554 282 0 0 chrX 137897766 137897883 -28752413 - B1_Mur1 SINE Alu -32 117 1 6 1637 664 234 0 0 chrX 137897899 137898040 -28752256 + Lx2B LINE L1 6158 6298 -699 6 1637 622 148 41 0 chrX 137898044 137898166 -28752130 + L1_Mus1 LINE L1 6438 6564 -3 6 1637 3762 152 32 16 chrX 137898181 137898828 -28751468 + Lx2B LINE L1 6330 6987 -13 6 1637 21 0 0 0 chrX 137898926 137898947 -28751349 + AT_rich Low_complexity Low_complexity 1 21 0 6 1637 233 211 68 111 chrX 137899892 137900009 -28750287 - RLTR22_Mus LTR ERVK -531 1277 1166 6 1637 630 81 12 0 chrX 137901499 137901585 -28748711 - L1_Mus2 LINE L1 -379 6187 6101 6 1637 2846 36 5 27 chrX 137901585 137901956 -28748340 + L1_Mus2 LINE L1 6196 6558 -8 6 1637 357 24 0 0 chrX 137901956 137901998 -28748298 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1637 206 354 0 0 chrX 137902065 137902130 -28748166 + MIRm SINE MIR 209 273 -3 6 1637 243 244 60 24 chrX 137902640 137902724 -28747572 + MIRc SINE MIR 150 236 -32 6 1637 203 254 116 83 chrX 137902974 137903122 -28747174 - MIR SINE MIR -66 202 56 6 1637 22 0 0 0 chrX 137903161 137903183 -28747113 + AT_rich Low_complexity Low_complexity 1 22 0 6 1637 317 24 0 23 chrX 137903185 137903228 -28747068 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1637 260 288 27 0 chrX 137903240 137903313 -28746983 - RSINE1 SINE B4 -32 133 59 6 1637 21 0 0 0 chrX 137904757 137904778 -28745518 + AT_rich Low_complexity Low_complexity 1 21 0 6 1637 778 246 95 20 chrX 137905182 137905435 -28744861 - Lx8 LINE L1 -3 7470 7199 6 1637 22 0 0 0 chrX 137905899 137905921 -28744375 + AT_rich Low_complexity Low_complexity 1 22 0 6 1637 264 91 0 0 chrX 137906776 137906820 -28743476 + (CAAA)n Simple_repeat Simple_repeat 3 46 0 6 1637 198 0 0 0 chrX 137906872 137906894 -28743402 + (CAA)n Simple_repeat Simple_repeat 2 23 0 6 1637 24 32 0 0 chrX 137911965 137911996 -28738300 + AT_rich Low_complexity Low_complexity 1 31 0 6 1637 270 0 0 0 chrX 137913024 137913054 -28737242 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1637 292 319 36 34 chrX 137913081 137913205 -28737091 - MIRb SINE MIR -131 145 25 6 1637 770 310 69 52 chrX 137913921 137914592 -28735704 - L1MC4 LINE L1 -663 7379 6698 6 1637 486 0 0 0 chrX 137914620 137914674 -28735622 + (CA)n Simple_repeat Simple_repeat 1 54 0 6 1637 276 282 0 14 chrX 137914874 137914946 -28735350 - tRNA-Ala-GCY_ tRNA tRNA -4 71 1 6 1637 546 16 0 0 chrX 137915262 137915325 -28734971 + (TC)n Simple_repeat Simple_repeat 2 64 0 6 1637 303 298 0 31 chrX 137915890 137915987 -28734309 - PB1D10 SINE Alu 0 117 24 6 1637 1154 116 17 6 chrX 137916083 137916256 -28734040 - B2_Mm2 SINE B2 -19 176 2 6 1637 1381 262 58 38 chrX 137916484 137916932 -28733364 + Lx6 LINE L1 6968 7424 -36 6 1637 1037 290 66 10 chrX 137917062 137917547 -28732749 - L1MA6 LINE L1 -303 5997 5486 6 1637 219 167 0 0 chrX 137917549 137917591 -28732705 + (CATG)n Simple_repeat Simple_repeat 4 45 0 6 1637 465 19 0 0 chrX 137917595 137917649 -28732647 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1637 680 302 46 11 chrX 137917651 137917932 -28732364 - B4A SINE B4 -1 291 1 6 1637 5087 50 8 2 chrX 137917950 137918592 -28731704 - L1Md_F3 LINE L1 -14 6570 5925 6 1637 374 290 20 13 chrX 137918592 137918697 -28731599 - PB1D7 SINE Alu -12 108 3 6 1637 286 259 30 22 chrX 137918697 137918831 -28731465 - L1MA6 LINE L1 -836 5307 5173 6 1637 232 403 16 16 chrX 137919651 137919777 -28730519 - Tigger12A DNA MER2_type -626 165 40 6 1637 1442 77 0 10 chrX 137920717 137920913 -28729383 + B2_Mm2 SINE B2 1 194 -1 6 1637 351 157 59 136 chrX 137920931 137921049 -28729247 + B1_Mus2 SINE Alu 8 116 -33 6 1637 414 197 0 0 chrX 137921363 137921429 -28728867 + B1_Mur4 SINE Alu 74 139 -11 6 1637 384 241 0 12 chrX 137921772 137921852 -28728444 - B3A SINE B2 -116 82 4 6 1637 1395 198 53 69 chrX 137921902 137922281 -28728015 - ORR1D1 LTR MaLR -1 373 1 6 1637 349 277 131 33 chrX 137923214 137923367 -28726929 - L1M4 LINE L1 -1787 4359 4192 6 1637 368 301 221 0 chrX 137923652 137923884 -28726412 - B4A SINE B4 -4 288 6 6 1637 294 182 0 0 chrX 137923955 137924021 -28726275 + (TATG)n Simple_repeat Simple_repeat 2 67 0 6 1637 477 0 0 0 chrX 137924291 137924344 -28725952 + (TTA)n Simple_repeat Simple_repeat 2 54 0 6 1637 588 65 0 0 chrX 137925773 137925850 -28724446 + (CA)n Simple_repeat Simple_repeat 1 77 0 6 1637 1162 201 168 45 chrX 137925888 137926221 -28724075 - ORR1D1 LTR MaLR 0 374 1 6 1637 306 197 106 0 chrX 137926221 137926287 -28724009 - ORR1D1-int LTR MaLR 0 1370 1298 6 1637 251 335 54 72 chrX 137926758 137926925 -28723371 + Lx8 LINE L1 6919 7082 -391 6 1637 652 226 0 0 chrX 137927592 137927707 -28722589 + B1F SINE Alu 3 117 -32 6 1637 1801 85 0 0 chrX 137927764 137928012 -28722284 - L1_Mm LINE L1 -1711 4172 3925 6 1637 1151 61 0 0 chrX 137928012 137928159 -28722137 + L1_Mus1 LINE L1 6421 6567 0 6 1637 686 245 0 28 chrX 137928370 137928513 -28721783 - B1_Mus2 SINE Alu -8 139 1 6 1637 243 326 0 0 chrX 137930491 137930589 -28719707 - L1ME1 LINE L1 0 6179 6082 6 1637 584 254 35 12 chrX 137930695 137930866 -28719430 - L1M4c LINE L1 -460 6305 6131 6 1637 6437 89 45 19 chrX 137930954 137931903 -28718393 - Lx LINE L1 -4 6650 5677 6 1637 720 218 0 0 chrX 137931905 137932038 -28718258 - B1_Mur1 SINE Alu -16 133 1 6 1637 230 210 128 68 chrX 137932049 137932182 -28718114 - L1M4c LINE L1 -702 6083 5943 6 1637 226 295 31 10 chrX 137932627 137932723 -28717573 - L1MB8 LINE L1 -173 6005 5908 6 1637 385 232 76 22 chrX 137932857 137933042 -28717254 - L1M4c LINE L1 -777 5970 5776 6 1637 361 311 105 8 chrX 137933051 137933184 -28717112 - ID_B1 SINE B4 0 224 79 6 1637 820 296 92 88 chrX 137933222 137933938 -28716358 - L1M4c LINE L1 -1012 5735 5017 6 1637 799 221 148 11 chrX 137933987 137934127 -28716169 - B3 SINE B2 -7 209 45 6 1637 4295 32 0 0 chrX 137934127 137934632 -28715664 + L1Md_A LINE L1 6078 6582 0 6 1637 799 221 148 11 chrX 137934632 137934674 -28715622 - B3 SINE B2 -172 44 3 6 1637 342 0 0 0 chrX 137934867 137934905 -28715391 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1637 514 301 93 23 chrX 137934913 137935310 -28714986 - L1M4c LINE L1 -4923 1826 1402 6 1637 241 287 19 38 chrX 137935459 137935564 -28714732 - L1M4c LINE L1 -5314 1331 1229 6 1637 248 344 0 0 chrX 137935800 137935864 -28714432 - ID SINE ID -141 83 20 6 1637 281 295 186 21 chrX 137936252 137936446 -28713850 - L1M4c LINE L1 -6179 428 203 6 1637 305 278 18 18 chrX 137936680 137936790 -28713506 - L1M4 LINE L1 -1298 4848 4739 6 1637 1216 62 0 0 chrX 137937050 137937196 -28713100 - B1_Mm SINE Alu -1 146 1 6 1637 305 193 22 33 chrX 137937687 137937778 -28712518 - Lx8 LINE L1 -1 7472 7383 6 1637 352 258 166 79 chrX 137937792 137937931 -28712365 + MER20 DNA MER1_type 40 190 -29 6 1637 183 42 0 0 chrX 137938433 137938457 -28711839 + (CAA)n Simple_repeat Simple_repeat 2 25 0 6 1637 252 211 0 0 chrX 137938457 137938495 -28711801 + B3 SINE B2 27 64 -152 6 1637 434 275 125 101 chrX 137938626 137938994 -28711302 - MTEa LTR MaLR -2 377 1 6 1637 226 271 43 0 chrX 137939100 137939170 -28711126 - ID2 SINE ID -9 74 2 6 1637 239 380 50 0 chrX 137939180 137939280 -28711016 - B1F SINE Alu -8 141 37 6 1637 362 204 35 17 chrX 137939285 137939400 -28710896 - Lx9 LINE L1 -111 7533 7417 6 1637 22 0 0 0 chrX 137939498 137939520 -28710776 + AT_rich Low_complexity Low_complexity 1 22 0 6 1637 1201 88 0 6 chrX 137939691 137939852 -28710444 - L1_Mus1 LINE L1 -341 6226 6067 6 1637 2952 83 5 0 chrX 137939852 137940247 -28710049 + L1_Mus1 LINE L1 6168 6564 -3 6 1637 640 205 57 12 chrX 137940548 137940713 -28709583 + ORR1D1 LTR MaLR 193 376 -8 6 1637 1051 177 51 121 chrX 137940884 137941141 -28709155 - ORR1C2 LTR MaLR -2 382 144 6 1637 329 307 98 104 chrX 137941587 137941922 -28708374 - MLT1B LTR MaLR -52 338 6 6 1637 243 0 0 0 chrX 137941942 137941969 -28708327 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 6 1637 22 0 0 0 chrX 137942215 137942237 -28708059 + AT_rich Low_complexity Low_complexity 1 22 0 6 1637 217 337 22 65 chrX 137942477 137942569 -28707727 + L2c LINE L2 3215 3302 -85 6 1637 333 356 40 40 chrX 137942584 137942736 -28707560 + ID_B1 SINE B4 65 216 -8 6 1637 301 313 167 19 chrX 137942764 137943178 -28707118 + L1MD2 LINE L1 5883 6357 -2 6 1637 561 305 42 4 chrX 137943334 137943594 -28706702 - L1MD LINE L1 -431 5811 5542 6 1637 802 274 49 36 chrX 137943654 137944118 -28706178 - L1MD LINE L1 -909 5450 4980 6 1637 405 102 0 0 chrX 137944205 137944264 -28706032 + (TTA)n Simple_repeat Simple_repeat 2 60 0 6 1637 572 223 45 30 chrX 137944267 137944401 -28705895 - B1_Mur3 SINE Alu -13 136 1 6 1637 348 317 74 62 chrX 137944846 137945102 -28705194 + L1M4 LINE L1 9 267 -6275 6 1637 389 323 32 14 chrX 137945550 137945770 -28704526 + L1M4 LINE L1 823 1046 -5496 6 1637 725 281 78 26 chrX 137946045 137946389 -28703907 - L1M2 LINE L1 -506 5677 5316 6 1637 365 320 6 10 chrX 137947086 137947243 -28703053 + MLT1B LTR MaLR 245 403 -5 6 1637 506 251 50 25 chrX 137947519 137947746 -28702550 - L1M2 LINE L1 -843 5303 5076 6 1637 571 307 0 7 chrX 137947792 137947946 -28702350 - RSINE1 SINE B4 -10 155 3 6 1637 1135 175 18 5 chrX 137947982 137948200 -28702096 - URR1B DNA MER1_type -2 223 3 6 1637 2044 304 91 52 chrX 137948235 137949212 -28701084 - Lx8 LINE L1 -3 7470 6456 6 1637 271 318 18 2 chrX 137949279 137949408 -28700888 - L1M2 LINE L1 -1199 4944 4801 6 1637 302 354 10 10 chrX 137949484 137949584 -28700712 - L1M2 LINE L1 -1394 4749 4650 6 1637 866 261 98 31 chrX 137949666 137950067 -28700229 - L1M2 LINE L1 -1656 4487 4049 6 1637 2488 137 47 5 chrX 137950067 137950493 -28699803 - Lx3B LINE L1 0 6973 6530 6 1637 866 261 98 31 chrX 137950493 137950609 -28699687 - L1M2 LINE L1 -2095 4048 3936 6 1637 304 169 15 30 chrX 137950649 137950716 -28699580 - B1_Mur4 SINE Alu -2 148 83 7 1637 1043 262 111 44 chrX 137950744 137951073 -28699223 - Lx8 LINE L1 -952 6521 6168 7 1637 389 37 37 0 chrX 137951073 137951127 -28699169 + (TATG)n Simple_repeat Simple_repeat 1 56 0 7 1637 1043 262 111 44 chrX 137951127 137951184 -28699112 - Lx8 LINE L1 -1306 6167 6110 7 1637 327 284 75 61 chrX 137951200 137951414 -28698882 + RLTR15 LTR ERVK 7 223 -136 7 1637 21 36 0 0 chrX 137951452 137951480 -28698816 + AT_rich Low_complexity Low_complexity 1 28 0 7 1637 21 0 0 0 chrX 137951517 137951538 -28698758 + AT_rich Low_complexity Low_complexity 1 21 0 7 1637 455 247 99 12 chrX 137951800 137951972 -28698324 + L1M2 LINE L1 5268 5454 -843 7 1637 24 53 0 0 chrX 137952104 137952142 -28698154 + AT_rich Low_complexity Low_complexity 1 38 0 7 1637 407 36 0 0 chrX 137952190 137952245 -28698051 - L1_Mus2 LINE L1 -3 6563 6509 7 1637 302 294 83 0 chrX 137952330 137952439 -28697857 - L1M4 LINE L1 -1173 4973 4856 7 1637 1403 39 6 0 chrX 137952478 137952656 -28697640 + (TTC)n Simple_repeat Simple_repeat 2 180 0 7 1637 1094 166 82 5 chrX 137952695 137952901 -28697395 - URR1A DNA MER1_type 0 226 5 7 1637 2398 45 104 9 chrX 137953353 137953669 -28696627 - ORR1A1 LTR MaLR 0 346 1 7 1637 8581 154 51 13 chrX 137954347 137956107 -28694189 - Lx4A LINE L1 0 7058 5214 7 1637 2330 66 119 11 chrX 137956107 137956459 -28693837 - RLTR10 LTR ERVK 0 390 1 7 1637 8581 142 29 24 chrX 137956459 137957339 -28692957 - Lx4A LINE L1 -664 5213 4333 7 1637 456 19 0 0 chrX 137957619 137957672 -28692624 + (TA)n Simple_repeat Simple_repeat 1 53 0 7 1637 2332 222 60 2 chrX 137958322 137958818 -28691478 - MT2A LTR ERVL -8 525 1 7 1637 762 184 69 29 chrX 137958818 137958992 -28691304 - MERVL_2A-int LTR ERVL 0 5761 5581 7 1637 468 276 353 0 chrX 137959032 137959196 -28691100 - MTE2b LTR MaLR -157 222 1 7 1637 21 0 0 0 chrX 137959256 137959277 -28691019 + AT_rich Low_complexity Low_complexity 1 21 0 7 1637 306 333 32 24 chrX 137959410 137959536 -28690760 + B1F1 SINE Alu 17 143 -6 7 1637 495 273 188 0 chrX 137959556 137959587 -28690709 - B3 SINE B2 -5 211 181 7 1637 315 0 0 0 chrX 137959587 137959622 -28690674 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1637 495 273 188 0 chrX 137959622 137959766 -28690530 - B3 SINE B2 -36 180 4 7 1637 23 78 0 0 chrX 137959954 137960005 -28690291 + AT_rich Low_complexity Low_complexity 1 51 0 7 1637 297 0 0 0 chrX 137960058 137960091 -28690205 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 1637 243 0 0 0 chrX 137960091 137960117 -28690179 + (TA)n Simple_repeat Simple_repeat 2 28 0 7 1637 603 294 22 0 chrX 137960177 137960313 -28689983 + ID_B1 SINE B4 81 219 -5 7 1637 498 291 78 13 chrX 137960526 137960679 -28689617 + B3 SINE B2 49 211 -5 7 1637 254 194 14 0 chrX 137961204 137961276 -28689020 + CT-rich Low_complexity Low_complexity 1 73 0 7 1637 212 338 0 14 chrX 137961742 137961814 -28688482 + MIR3 SINE MIR 115 185 -23 7 1637 599 184 169 13 chrX 137961981 137962135 -28688161 + B3 SINE B2 39 216 0 7 1637 774 250 110 54 chrX 137962995 137963477 -28686819 - L1M5 LINE L1 -3417 2729 2221 7 1637 23 0 0 0 chrX 137963784 137963807 -28686489 + AT_rich Low_complexity Low_complexity 1 23 0 7 1637 279 408 77 22 chrX 137963878 137964201 -28686095 + LTR40a LTR ERVL 1 341 -178 7 1637 1364 297 69 40 chrX 137964377 137965219 -28685077 - L1MB8 LINE L1 -1 6177 5312 7 1637 297 179 24 12 chrX 137965249 137965334 -28684962 + (TA)n Simple_repeat Simple_repeat 1 86 0 7 1637 28 29 0 0 chrX 137965423 137965458 -28684838 + AT_rich Low_complexity Low_complexity 1 35 0 7 1637 4276 231 109 12 chrX 137965458 137966527 -28683769 - Lx5 LINE L1 -48 7002 5830 7 1637 538 282 34 6 chrX 137966601 137966776 -28683520 - B3A SINE B2 -17 181 2 7 1637 611 201 13 26 chrX 137966962 137967115 -28683181 + L1_Rod LINE L1 4725 4875 -972 7 1637 274 291 10 0 chrX 137967113 137967216 -28683080 + Lx9 LINE L1 7541 7644 0 7 1637 3394 211 83 33 chrX 137967234 137967484 -28682812 + L1_Rod LINE L1 4862 5125 -722 7 1637 2265 47 70 0 chrX 137967484 137967785 -28682511 + L1_Mus3 LINE L1 6313 6634 -4 7 1637 3394 211 83 33 chrX 137967785 137968473 -28681823 + L1_Rod LINE L1 5126 5846 -1 7 1637 26 30 0 0 chrX 137968491 137968524 -28681772 + AT_rich Low_complexity Low_complexity 1 33 0 7 1637 343 303 11 0 chrX 137968596 137968685 -28681611 + ORR1E LTR MaLR 3 92 -267 7 1637 44 63 0 0 chrX 137969995 137970074 -28680222 + AT_rich Low_complexity Low_complexity 1 79 0 7 1637 626 207 0 0 chrX 137970088 137970204 -28680092 - B3 SINE B2 -99 117 2 7 1637 22 35 0 0 chrX 137970423 137970452 -28679844 + AT_rich Low_complexity Low_complexity 1 29 0 7 1637 287 76 29 0 chrX 137970754 137970803 -28679493 - B1_Mm SINE Alu 0 147 68 7 1637 1772 193 81 33 chrX 137971097 137971493 -28678803 - MTD LTR MaLR -4 415 1 7 1637 834 153 6 12 chrX 137972189 137972342 -28677954 + GA-rich Low_complexity Low_complexity 1 152 0 7 1637 1214 95 6 0 chrX 137972342 137972521 -28677775 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 7 1637 834 153 6 12 chrX 137972521 137972539 -28677757 + polypurine Low_complexity Low_complexity 153 170 0 7 1637 288 211 0 0 chrX 137972635 137972695 -28677601 + B1_Mus2 SINE Alu 1 60 -89 7 1637 340 198 119 50 chrX 137972736 137972837 -28677459 + B1_Mur2 SINE Alu 42 149 0 7 1637 321 118 0 0 chrX 137972950 137973001 -28677295 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1637 332 250 0 0 chrX 137973547 137973615 -28676681 - ID4_ SINE ID -11 72 5 7 1637 7818 60 0 5 chrX 137973649 137974645 -28675651 + L1Md_F2 LINE L1 5587 6577 -5 7 1637 599 225 72 7 chrX 137974810 137974949 -28675347 - B1_Mur1 SINE Alu 0 149 2 7 1637 303 28 0 0 chrX 137974962 137974998 -28675298 + (TAA)n Simple_repeat Simple_repeat 1 36 0 7 1637 2669 61 9 95 chrX 137975409 137975607 -28674689 + MTA_Mm LTR MaLR 1 166 -230 7 1637 1746 65 0 36 chrX 137975607 137975860 -28674436 - L1Md_F2 LINE L1 -1 6581 6338 7 1637 2669 61 9 95 chrX 137975860 137976094 -28674202 + MTA_Mm LTR MaLR 167 396 0 7 1637 344 375 101 46 chrX 137976231 137976947 -28673349 + L1MEb LINE L1 119 873 -5197 7 1637 232 358 37 15 chrX 137976983 137977119 -28673177 + MER5A DNA MER1_type 48 186 -3 7 1637 232 362 0 0 chrX 137977420 137977489 -28672807 + ID_B1 SINE B4 93 161 -63 7 1637 2297 79 6 3 chrX 137977865 137978181 -28672115 - L1_Mus3 LINE L1 0 6638 6322 7 1637 457 106 0 0 chrX 137978181 137978247 -28672049 + L1_Mus3 LINE L1 6265 6330 -308 7 1637 188 317 71 47 chrX 137978405 137978574 -28671722 + MIR SINE MIR 90 262 0 7 1637 372 181 65 43 chrX 137979218 137979357 -28670939 + Lx9 LINE L1 7488 7629 -15 7 1637 22 35 0 0 chrX 137979371 137979400 -28670896 + AT_rich Low_complexity Low_complexity 1 29 0 7 1637 405 262 67 60 chrX 137979464 137979614 -28670682 - RSINE1 SINE B4 -2 163 13 7 1637 614 296 22 39 chrX 137980931 137981163 -28669133 - RMER15 LTR ERVL -12 563 336 7 1637 274 273 79 7 chrX 137983180 137983320 -28666976 - L1MC LINE L1 -2415 5467 5318 7 1637 6349 97 24 11 chrX 137983622 137985387 -28664909 + L1VL2 LINE L1 119 1909 -1706 7 1637 4337 71 2 0 chrX 137985383 137985944 -28664352 + L1Md_F2 LINE L1 5025 5586 -297 7 1637 7833 48 12 9 chrX 137985945 137986926 -28663370 + L1Md_F2 LINE L1 5588 6571 -11 7 1637 20054 149 25 27 chrX 137986965 137989451 -28660845 + Lx LINE L1 2205 4627 -1256 7 1637 222 37 0 0 chrX 137989451 137989478 -28660818 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 7 1637 20054 123 43 24 chrX 137989478 137991428 -28658868 + Lx LINE L1 4628 6647 -7 7 1637 312 327 56 0 chrX 137991475 137991582 -28658714 + Tigger7 DNA MER2_type 2 114 -2377 7 1637 275 307 85 35 chrX 137991589 137991788 -28658508 + Tigger7 DNA MER2_type 2283 2491 0 7 1637 378 327 72 47 chrX 137991855 137992218 -28658078 - L1MC LINE L1 -1373 4773 4402 7 1637 250 315 0 14 chrX 137992345 137992419 -28657877 - B1F SINE Alu -55 94 22 7 1637 415 281 40 68 chrX 137993484 137993732 -28656564 - Lx9 LINE L1 -142 7502 7262 7 1637 1210 271 27 14 chrX 137993737 137994032 -28656264 - MTE2b LTR MaLR -78 301 3 7 1637 1772 299 27 52 chrX 137994038 137994634 -28655662 - MTE2b-int LTR MaLR -6 1574 927 7 1637 207 0 0 0 chrX 137994634 137994657 -28655639 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1637 1772 298 47 53 chrX 137994657 137995164 -28655132 - MTE2b-int LTR MaLR -654 926 105 7 1637 1085 135 10 45 chrX 137995164 137995366 -28654930 - B2_Mm2 SINE B2 0 195 1 7 1637 1516 273 16 21 chrX 137995366 137995488 -28654808 - MTE2b-int LTR MaLR -1456 124 1 7 1637 546 269 6 77 chrX 137995488 137995657 -28654639 - MTE2b LTR MaLR 0 379 223 7 1637 30318 30 0 0 chrX 137995657 138000000 -28650296 - L1Md_T LINE L1 0 6582 2269 7 1637 8609 88 2 8 chrX 138000000 138003234 -28647062 - L1Md_Gf LINE L1 -3615 2271 1 1 1637 835 254 52 52 chrX 138003234 138003463 -28646833 - MTE2b LTR MaLR -145 234 6 2 1637 26 50 0 0 chrX 138003693 138003733 -28646563 + AT_rich Low_complexity Low_complexity 1 40 0 3 1637 1070 128 40 6 chrX 138003956 138004129 -28646167 - B2_Mm2 SINE B2 -15 180 2 4 1637 253 247 224 0 chrX 138004823 138004908 -28645388 - PB1D10 SINE Alu -7 110 7 5 1637 228 282 64 0 chrX 138005156 138005234 -28645062 - L1MC LINE L1 -2229 5653 5571 6 1637 558 43 0 0 chrX 138005457 138005526 -28644770 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 7 1637 2081 32 0 0 chrX 138005527 138005774 -28644522 - L1_Mus1 LINE L1 -7 6560 6314 8 1637 3123 63 2 0 chrX 138005774 138006171 -28644125 + L1_Mus1 LINE L1 5920 6317 -250 8 1637 545 280 30 22 chrX 138006952 138007087 -28643209 - RSINE1 SINE B4 -19 146 11 9 1637 537 198 19 19 chrX 138007593 138007701 -28642595 - PB1D9 SINE Alu 0 120 13 1 1637 1164 51 0 0 chrX 138007729 138007867 -28642429 - B1_Mm SINE Alu -8 139 2 1 1637 1606 62 39 13 chrX 138007897 138008127 -28642169 - L1_Mus2 LINE L1 -1 6565 6330 1 1637 4150 53 58 0 chrX 138008130 138008660 -28641636 + L1_Mus2 LINE L1 5751 6311 -255 1 1637 521 88 12 0 chrX 138008925 138009005 -28641291 + (TG)n Simple_repeat Simple_repeat 2 82 0 1 1637 3978 65 0 0 chrX 138009314 138009807 -28640489 - L1Md_F2 LINE L1 -13 6569 6077 1 1637 349 170 17 26 chrX 138011518 138011633 -28638663 + (TA)n Simple_repeat Simple_repeat 1 114 0 1 1637 1864 312 67 40 chrX 138011727 138012531 -28637765 - Lx8 LINE L1 -87 7386 6561 1 1637 21 36 0 0 chrX 138012600 138012628 -28637668 + AT_rich Low_complexity Low_complexity 1 28 0 1 1637 234 256 0 0 chrX 138012630 138012673 -28637623 - ID4_ SINE ID -27 56 14 1 1637 221 392 61 0 chrX 138012845 138012993 -28637303 + L2a LINE L2 3270 3426 0 1 1637 262 260 82 0 chrX 138015382 138015455 -28634841 + ID4_ SINE ID 1 79 -4 2 1637 3503 279 62 11 chrX 138016084 138017141 -28633155 - Lx8 LINE L1 -7 7466 6357 2 1637 453 213 46 0 chrX 138018067 138018175 -28632121 + L1MA9 LINE L1 6184 6296 -16 2 1637 24 32 0 0 chrX 138018183 138018214 -28632082 + AT_rich Low_complexity Low_complexity 1 31 0 2 204 597 222 111 0 chrX 138018815 138018950 -28631346 + B1_Mur4 SINE Alu 1 150 0 2 1638 29 28 0 0 chrX 138018950 138018986 -28631310 + AT_rich Low_complexity Low_complexity 1 36 0 2 1638 395 226 102 12 chrX 138019365 138019516 -28630780 - MTEb LTR MaLR -11 368 197 2 1638 228 163 0 0 chrX 138019525 138019568 -28630728 + CT-rich Low_complexity Low_complexity 2 44 0 2 1638 791 328 33 43 chrX 138019853 138020276 -28630020 - Lx8 LINE L1 -419 7054 6636 2 1638 1709 150 29 68 chrX 138020277 138020738 -28629558 + RMER17C LTR ERVK 16 439 -519 2 1638 615 288 128 11 chrX 138020928 138021321 -28628975 - L1_Rod LINE L1 -199 5648 5267 3 1638 378 0 0 0 chrX 138021343 138021385 -28628911 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1638 501 204 48 0 chrX 138021393 138021496 -28628800 - B3A SINE B2 -90 108 1 3 1638 965 288 29 95 chrX 138021535 138021652 -28628644 - L1_Mur3 LINE L1 -552 5328 5232 3 1638 5796 130 30 5 chrX 138021652 138022532 -28627764 - Lx4A LINE L1 -1 7057 6156 3 1638 965 288 29 95 chrX 138022532 138022681 -28627615 - L1_Mur3 LINE L1 -649 5231 5096 3 1638 1593 225 42 20 chrX 138022681 138023039 -28627257 - ORR1D2 LTR MaLR -4 366 1 3 1638 965 292 35 86 chrX 138023039 138023359 -28626937 - L1_Mur3 LINE L1 -785 5095 4799 3 1638 1028 136 11 6 chrX 138026840 138027018 -28623278 - Lx LINE L1 -2 6652 6474 3 1638 1995 48 3 94 chrX 138027022 138027319 -28622977 + Lx LINE L1 5587 5856 -798 3 1638 344 317 72 36 chrX 138027498 138027665 -28622631 - B4 SINE B4 -105 187 15 3 1638 1144 51 0 0 chrX 138027804 138027941 -28622355 + B1_Mus1 SINE Alu 2 138 -10 3 1638 1708 65 4 4 chrX 138028202 138028434 -28621862 + L1Md_F2 LINE L1 6349 6580 -2 4 1638 468 0 0 0 chrX 138028953 138029005 -28621291 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 1638 210 154 0 0 chrX 138029142 138029181 -28621115 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1638 225 304 28 28 chrX 138029669 138029740 -28620556 + RSINE1 SINE B4 11 81 -84 4 1638 382 308 109 93 chrX 138029822 138030033 -28620263 + L1MEe LINE L1 632 855 -3999 4 1638 4654 104 3 1 chrX 138030033 138030697 -28619599 + L1_Mus3 LINE L1 5972 6636 -2 4 1638 382 308 109 93 chrX 138030697 138030926 -28619370 + L1MEe LINE L1 856 1079 -3775 4 1638 713 271 24 29 chrX 138032314 138032523 -28617773 + B3 SINE B2 1 208 -8 4 1638 23 70 0 27 chrX 138032690 138032738 -28617558 + AT_rich Low_complexity Low_complexity 1 47 0 4 1638 1255 108 21 5 chrX 138032738 138032925 -28617371 + B2_Mm2 SINE B2 1 190 -5 4 1638 23 70 0 27 chrX 138032925 138032949 -28617347 + AT_rich Low_complexity Low_complexity 1 24 0 4 1638 467 338 70 9 chrX 138033192 138033407 -28616889 - Lx8 LINE L1 -218 7255 7028 5 1638 702 173 71 14 chrX 138033575 138033716 -28616580 - B1_Mur4 SINE Alu -1 149 1 5 1638 303 28 0 0 chrX 138035149 138035185 -28615111 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 1638 1041 113 0 0 chrX 138035187 138035329 -28614967 - B1_Mus1 SINE Alu -5 143 2 5 1638 219 349 106 13 chrX 138035358 138035509 -28614787 + L2a LINE L2 1469 1633 -1786 5 1638 219 36 0 0 chrX 138036103 138036131 -28614165 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 5 1638 30232 94 9 24 chrX 138036320 138038317 -28611979 + L1Md_F2 LINE L1 363 2310 -3573 5 1638 3914 38 4 2 chrX 138038317 138038794 -28611502 - L1Md_F3 LINE L1 -2 6582 6105 5 1638 30232 91 3 28 chrX 138038794 138042155 -28608141 + L1Md_F2 LINE L1 2311 5597 -286 5 1638 7045 81 11 4 chrX 138042157 138043120 -28607176 + L1Md_F2 LINE L1 5600 6569 -13 5 1638 899 129 50 0 chrX 138043252 138043391 -28606905 + B1_Mus2 SINE Alu 1 146 -1 5 1638 316 332 21 154 chrX 138043884 138044222 -28606074 + L2a LINE L2 3112 3404 -22 5 1638 629 41 20 10 chrX 138045267 138045365 -28604931 + L1Md_F3 LINE L1 6483 6581 -3 5 1638 28 29 0 0 chrX 138045870 138045905 -28604391 + AT_rich Low_complexity Low_complexity 1 35 0 6 1638 6341 79 2 45 chrX 138045932 138046873 -28603423 - L1_Mus2 LINE L1 -1 6565 5703 6 1638 330 26 0 0 chrX 138047585 138047624 -28602672 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1638 237 289 53 43 chrX 138047765 138047859 -28602437 + L2c LINE L2 3287 3381 -6 6 1638 219 114 0 0 chrX 138048237 138048272 -28602024 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 6 1638 527 221 12 105 chrX 138048482 138048730 -28601566 - Lx9 LINE L1 -7 7637 7413 6 1638 423 236 0 11 chrX 138048743 138048833 -28601463 - B4A SINE B4 -64 228 140 6 1638 883 270 13 103 chrX 138048923 138049224 -28601072 - MLT2B3 LTR ERVL -278 276 3 6 1638 1212 106 0 0 chrX 138049257 138049436 -28600860 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 6 1638 228 242 16 0 chrX 138049436 138049498 -28600798 + CT-rich Low_complexity Low_complexity 4 66 0 6 1638 693 249 36 68 chrX 138050000 138050220 -28600076 + B3 SINE B2 1 213 -3 7 1638 329 89 0 0 chrX 138050258 138050303 -28599993 - B4A SINE B4 -64 228 184 7 1638 240 343 0 10 chrX 138050379 138050479 -28599817 + L2a LINE L2 3328 3426 0 7 1638 986 176 51 42 chrX 138051214 138051428 -28598868 - B3 SINE B2 0 216 1 7 1638 304 40 40 0 chrX 138053354 138053404 -28596892 + (CAAAAA)n Simple_repeat Simple_repeat 3 54 0 7 1638 1179 61 0 0 chrX 138053467 138053614 -28596682 + B1_Mm SINE Alu 1 147 0 7 1638 195 69 0 0 chrX 138053614 138053643 -28596653 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1638 251 325 0 11 chrX 138053674 138053761 -28596535 - L1ME2z LINE L1 -24 6420 6335 7 1638 229 355 0 0 chrX 138053806 138053882 -28596414 + ID4_ SINE ID 4 79 -4 7 1638 250 283 62 50 chrX 138053930 138053966 -28596330 - L1ME2z LINE L1 -72 6372 6340 7 1638 1635 39 0 0 chrX 138053966 138054169 -28596127 - L1Md_A LINE L1 0 6582 6380 8 1638 250 283 62 50 chrX 138054169 138054292 -28596004 - L1ME2z LINE L1 -105 6339 6211 7 1638 396 0 0 0 chrX 138054447 138054491 -28595805 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1638 341 314 132 9 chrX 138054658 138054886 -28595410 - L1ME2z LINE L1 -694 5750 5495 7 1638 192 77 0 0 chrX 138055425 138055451 -28594845 + (TA)n Simple_repeat Simple_repeat 2 27 0 8 1638 1143 82 0 14 chrX 138055679 138055827 -28594469 - B1_Mus1 SINE Alu 0 148 3 8 1638 29 0 0 0 chrX 138055985 138056014 -28594282 + AT_rich Low_complexity Low_complexity 1 29 0 8 1638 2890 40 6 0 chrX 138056286 138056640 -28593656 - L1Md_F2 LINE L1 0 6582 6227 8 1638 463 281 72 111 chrX 138056767 138057236 -28593060 + L1MD LINE L1 3536 3986 -2160 8 1638 216 333 78 0 chrX 138057244 138057334 -28592962 + PB1D10 SINE Alu 21 117 0 8 1638 438 313 125 17 chrX 138057433 138057953 -28592343 + L1M5 LINE L1 4037 4612 -1534 8 1638 1259 291 64 0 chrX 138058517 138058861 -28591435 - MTE2b LTR MaLR -11 368 3 8 1638 280 272 47 16 chrX 138058935 138059062 -28591234 + L1MD LINE L1 5036 5166 -980 8 1638 22 0 0 0 chrX 138059175 138059197 -28591099 + AT_rich Low_complexity Low_complexity 1 22 0 9 1638 398 133 11 0 chrX 138059282 138059372 -28590924 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 9 1638 619 281 43 4 chrX 138059508 138059740 -28590556 + L1ME1 LINE L1 5563 5803 -376 9 1638 301 308 13 0 chrX 138059743 138059821 -28590475 - ID SINE ID -144 80 2 9 1638 492 302 33 24 chrX 138059910 138060187 -28590109 + L1ME1 LINE L1 5834 6115 -64 9 1638 1072 264 106 9 chrX 138060338 138060494 -28589802 - Lx8 LINE L1 -141 7332 7163 9 1638 1163 28 7 0 chrX 138060494 138060637 -28589659 + (CA)n Simple_repeat Simple_repeat 2 145 0 9 1638 1072 264 106 9 chrX 138060637 138060809 -28589487 - Lx8 LINE L1 -311 7162 6973 9 1638 710 225 92 11 chrX 138061148 138061332 -28588964 + Lx6 LINE L1 7261 7459 -1 9 1638 282 29 0 0 chrX 138063058 138063093 -28587203 + (CAAAAA)n Simple_repeat Simple_repeat 3 37 0 9 1638 27 29 0 0 chrX 138063322 138063356 -28586940 + AT_rich Low_complexity Low_complexity 1 34 0 9 1638 205 233 11 43 chrX 138063784 138063878 -28586418 + A-rich Low_complexity Low_complexity 2 92 0 9 1638 253 265 73 49 chrX 138064088 138064211 -28586085 + MER5C DNA MER1_type 52 177 -136 1 1638 265 336 95 85 chrX 138064868 138065174 -28585122 - MLT1H2 LTR MaLR -5 484 176 1 1638 949 215 14 19 chrX 138065184 138065397 -28584899 + B3 SINE B2 5 216 0 1 1638 314 354 18 60 chrX 138065408 138065576 -28584720 + HAL1-3A_ME LINE L1 2293 2453 -405 1 1638 42 71 0 0 chrX 138066079 138066163 -28584133 + AT_rich Low_complexity Low_complexity 1 84 0 1 1638 1981 201 163 4 chrX 138066224 138066747 -28583549 - Lx3C LINE L1 -2 6974 6305 1 1638 349 49 0 0 chrX 138066745 138066786 -28583510 + Lx3_Mus LINE L1 5661 5701 -1308 1 1638 342 0 0 0 chrX 138067424 138067462 -28582834 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1638 536 286 42 0 chrX 138067463 138067582 -28582714 - RSINE1 SINE B4 -34 131 8 1 1638 374 284 185 21 chrX 138067779 138068011 -28582285 + B4A SINE B4 1 270 -22 1 1638 246 231 15 0 chrX 138068057 138068122 -28582174 + (CATA)n Simple_repeat Simple_repeat 3 68 0 1 1638 342 45 0 0 chrX 138068354 138068398 -28581898 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1638 231 125 0 0 chrX 138068671 138068711 -28581585 + (ATTG)n Simple_repeat Simple_repeat 3 42 0 1 1638 457 392 46 0 chrX 138068714 138068867 -28581429 - RSINE1 SINE B4 -4 161 2 1 1638 4980 34 0 0 chrX 138069259 138069845 -28580451 + L1Md_T LINE L1 5997 6582 0 1 1638 282 216 0 0 chrX 138070165 138070239 -28580057 + (CA)n Simple_repeat Simple_repeat 2 75 0 1 1638 24 0 0 0 chrX 138070883 138070907 -28579389 + AT_rich Low_complexity Low_complexity 1 24 0 1 1638 576 0 0 0 chrX 138071332 138071396 -28578900 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 1638 515 321 109 0 chrX 138071919 138072112 -28578184 - ID_B1 SINE B4 -10 214 1 1 1638 2246 113 33 22 chrX 138072140 138072503 -28577793 - Lx3_Mus LINE L1 0 7009 6643 1 1638 5315 77 64 13 chrX 138072503 138073271 -28577025 - Lx3_Mus LINE L1 -567 6442 5636 1 1638 1172 48 14 0 chrX 138073990 138074135 -28576161 + B1_Mus1 SINE Alu 2 148 0 1 1638 310 270 71 9 chrX 138074365 138074477 -28575819 + L1MB1 LINE L1 6011 6129 -60 1 1638 525 257 34 27 chrX 138074523 138074671 -28575625 - B1F SINE Alu 0 149 1 1 1638 348 127 73 0 chrX 138074740 138074795 -28575501 + HAL1-3A_ME LINE L1 1976 2034 -824 1 1638 21 0 0 0 chrX 138074961 138074982 -28575314 + AT_rich Low_complexity Low_complexity 1 21 0 1 1638 701 297 4 76 chrX 138075145 138075422 -28574874 - Lx8 LINE L1 -175 7298 7042 1 1638 394 312 204 0 chrX 138075614 138075864 -28574432 - L1MA9 LINE L1 -409 5903 5603 1 1638 5797 86 6 6 chrX 138077400 138078203 -28572093 - L1_Mus3 LINE L1 -1 6637 5835 1 1638 3705 65 4 0 chrX 138078200 138078676 -28571620 + L1_Mus3 LINE L1 6154 6631 -7 1 1638 238 217 0 48 chrX 138078683 138078746 -28571550 + L1M5 LINE L1 5389 5448 -996 1 1638 298 245 0 0 chrX 138078746 138078799 -28571497 + RMER30 DNA MER1_type 133 185 -17 1 1638 328 365 80 0 chrX 138079094 138079231 -28571065 + MIRb SINE MIR 24 171 -97 1 1638 570 109 0 0 chrX 138079986 138080087 -28570209 + (TC)n Simple_repeat Simple_repeat 2 102 0 1 1638 3828 109 14 11 chrX 138080124 138080682 -28569614 - Lx LINE L1 -3 6651 6092 1 1638 3392 80 0 33 chrX 138080682 138081162 -28569134 + L1_Mus4 LINE L1 5628 6091 -545 1 1638 241 204 0 0 chrX 138081167 138081221 -28569075 - L1ME3A LINE L1 0 6173 6120 1 1638 393 293 0 0 chrX 138081675 138081774 -28568522 - ORR1D1 LTR MaLR -274 100 2 1 1638 429 288 119 31 chrX 138081835 138082061 -28568235 - L1MEc LINE L1 -4211 2189 1944 1 1638 299 325 0 0 chrX 138082063 138082140 -28568156 - ID2 SINE ID -3 80 4 1 1638 240 345 59 15 chrX 138082183 138082386 -28567910 - L1MEc LINE L1 -4506 1909 1698 1 1638 250 250 31 15 chrX 138082424 138082489 -28567807 - ID4_ SINE ID -14 69 4 1 1638 411 21 0 0 chrX 138082649 138082697 -28567599 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1638 318 248 28 132 chrX 138082718 138082862 -28567434 - B2_Mm2 SINE B2 -63 132 4 1 1638 221 0 35 0 chrX 138082907 138082936 -28567360 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1 1638 615 133 0 0 chrX 138083084 138083189 -28567107 + (TTTC)n Simple_repeat Simple_repeat 1 105 0 1 1638 495 307 51 19 chrX 138083216 138083372 -28566924 - RSINE1 SINE B4 0 165 5 1 1638 450 0 0 0 chrX 138083533 138083583 -28566713 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1638 1148 227 67 42 chrX 138083891 138083952 -28566344 - ORR1D1 LTR MaLR 0 374 313 1 1638 1199 65 0 0 chrX 138083952 138084107 -28566189 - L1_Mus2 LINE L1 0 6566 6412 1 1638 1148 227 67 42 chrX 138084107 138084376 -28565920 - ORR1D1 LTR MaLR -62 312 36 1 1638 405 370 66 86 chrX 138084727 138084895 -28565401 + MLT1E2 LTR MaLR 29 200 -424 1 1638 795 292 14 0 chrX 138084895 138085107 -28565189 - B3 SINE B2 0 216 2 1 1638 541 360 105 43 chrX 138085107 138085546 -28564750 + MLT1E2 LTR MaLR 162 627 0 1 1638 740 263 56 0 chrX 138085792 138085990 -28564306 + B3 SINE B2 1 209 -7 1 1638 542 281 102 56 chrX 138086330 138086694 -28563602 + L1M5 LINE L1 5084 5459 -703 1 1638 3243 105 6 12 chrX 138086694 138087186 -28563110 - Lx2A1 LINE L1 0 7008 6520 1 1638 542 270 113 81 chrX 138087186 138087473 -28562823 + L1M5 LINE L1 5460 5768 -394 1 1638 1105 47 0 0 chrX 138087730 138087879 -28562417 - L1Md_F2 LINE L1 -1 6581 6433 1 1638 560 234 24 0 chrX 138088497 138088621 -28561675 - B3A SINE B2 -70 128 2 1 1638 276 282 98 18 chrX 138089168 138089280 -28561016 - RSINE1 SINE B4 -168 124 4 1 1638 460 261 110 103 chrX 138089361 138089506 -28560790 - B3 SINE B2 -14 179 34 1 1638 225 233 0 0 chrX 138090254 138090297 -28559999 + PB1D10 SINE Alu 42 84 -33 1 1638 285 51 0 0 chrX 138090405 138090444 -28559852 + (T)n Simple_repeat Simple_repeat 1 39 0 1 1638 1206 61 0 0 chrX 138090446 138090593 -28559703 - B1_Mus2 SINE Alu 0 147 1 1 1638 255 292 0 0 chrX 138093135 138093200 -28557096 + (TATG)n Simple_repeat Simple_repeat 3 67 0 1 1638 252 0 0 0 chrX 138093502 138093530 -28556766 + (TAA)n Simple_repeat Simple_repeat 1 28 0 1 1638 363 23 0 0 chrX 138093556 138093600 -28556696 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1638 3297 147 2 14 chrX 138093741 138094302 -28555994 - L1_Mm LINE L1 -629 5254 4701 1 1638 5822 88 12 1 chrX 138094305 138095113 -28555183 + L1_Mus3 LINE L1 5817 6633 -5 1 1638 676 233 0 0 chrX 138095119 138095239 -28555057 - B3A SINE B2 -78 120 1 1 1638 2795 98 88 5 chrX 138095609 138096041 -28554255 - Lx LINE L1 -2 6652 6185 1 1638 785 305 91 48 chrX 138096219 138096550 -28553746 - MER31B LTR ERV1 -39 427 83 1 1638 261 0 0 0 chrX 138096550 138096579 -28553717 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1638 592 169 8 8 chrX 138096860 138096991 -28553305 + CT-rich Low_complexity Low_complexity 3 133 0 1 1638 1226 41 0 0 chrX 138097271 138097418 -28552878 - B1_Mus2 SINE Alu 0 147 1 1 1638 229 286 73 52 chrX 138098122 138098218 -28552078 - MIRc SINE MIR -148 120 23 1 1638 23 97 0 0 chrX 138100146 138100218 -28550078 + AT_rich Low_complexity Low_complexity 1 72 0 1 1638 579 285 79 15 chrX 138101029 138101232 -28549064 + ID_B1 SINE B4 2 217 -7 1 1638 448 290 67 20 chrX 138101875 138102128 -28548168 - L1MC4 LINE L1 -233 7809 7545 1 1638 965 171 114 0 chrX 138102142 138102353 -28547943 + Lx2 LINE L1 6761 6995 -2 1 1638 644 275 83 47 chrX 138102451 138102813 -28547483 - L1MC4 LINE L1 -790 7252 6878 1 1638 438 324 70 59 chrX 138103098 138103270 -28547026 - MIR SINE MIR -2 260 86 1 1638 997 76 45 0 chrX 138103270 138103427 -28546869 + L1_Mus3 LINE L1 6470 6633 -5 1 1638 438 324 70 59 chrX 138103427 138103510 -28546786 - MIR SINE MIR -177 85 2 1 1638 251 264 123 0 chrX 138103693 138103799 -28546497 - Lx8 LINE L1 -2 7471 7353 1 1638 573 55 0 0 chrX 138103860 138103933 -28546363 + (TAG)n Simple_repeat Simple_repeat 1 73 0 1 1638 450 53 0 0 chrX 138104018 138104075 -28546221 + (CTTTG)n Simple_repeat Simple_repeat 3 59 0 1 1638 1840 260 102 50 chrX 138104410 138105434 -28544862 - Lx8 LINE L1 -971 6502 5437 1 1638 201 94 0 0 chrX 138105434 138105466 -28544830 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 1638 1376 239 93 48 chrX 138105466 138105563 -28544733 - Lx8 LINE L1 -444 5436 5341 1 1638 2818 260 73 35 chrX 138105567 138106754 -28543542 - Lx8 LINE L1 -3437 2443 1211 1 1638 198 0 0 0 chrX 138107696 138107718 -28542578 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 1 1638 222 37 0 0 chrX 138108559 138108586 -28541710 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 1 1638 305 239 11 11 chrX 138108728 138108817 -28541479 - Tigger12A DNA MER2_type -69 722 634 1 1638 422 336 0 0 chrX 138108927 138109046 -28541250 - B1F1 SINE Alu -2 147 29 1 1638 889 184 0 7 chrX 138109143 138109291 -28541005 + B1_Mus1 SINE Alu 1 147 -1 1 1638 1237 84 0 6 chrX 138109611 138109778 -28540518 + B2_Mm2 SINE B2 4 169 -26 1 1638 636 165 0 0 chrX 138110930 138111045 -28539251 + T-rich Low_complexity Low_complexity 5 119 0 1 1638 1318 77 14 0 chrX 138111022 138111383 -28538913 + (TTCCC)n Simple_repeat Simple_repeat 1 366 0 1 1638 844 123 29 17 chrX 138111387 138111560 -28538736 + CT-rich Low_complexity Low_complexity 4 178 0 1 1638 267 31 0 0 chrX 138111562 138111594 -28538702 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 1 1638 216 86 0 0 chrX 138111808 138111843 -28538453 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1638 6746 40 0 1 chrX 138111847 138112654 -28537642 - L1Md_T LINE L1 -1 6581 5776 1 1638 667 203 64 14 chrX 138112675 138112815 -28537481 + B3 SINE B2 70 216 0 1 1638 180 0 0 0 chrX 138112883 138112903 -28537393 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1 1638 1046 47 47 0 chrX 138112903 138113031 -28537265 - B1_Mus2 SINE Alu -13 134 1 1 1638 574 149 91 0 chrX 138113496 138113617 -28536679 - Lx9 LINE L1 -154 7490 7359 1 1638 1158 80 0 11 chrX 138113898 138114075 -28536221 + L1_Mus4 LINE L1 6455 6629 -7 1 1638 207 333 106 12 chrX 138114099 138114269 -28536027 - MIRc SINE MIR -30 238 53 1 1638 2718 201 54 2 chrX 138114297 138114851 -28535445 - Lx5 LINE L1 0 7050 6468 2 1638 245 344 0 0 chrX 138115557 138115621 -28534675 - ID4_ SINE ID -8 75 12 2 1638 1155 81 0 0 chrX 138115733 138115881 -28534415 - B1_Mus1 SINE Alu 0 148 1 2 1638 651 264 111 84 chrX 138116051 138116205 -28534091 + B3A SINE B2 1 152 -43 2 1638 303 130 0 0 chrX 138116205 138116259 -28534037 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1638 401 264 111 84 chrX 138116259 138116294 -28534002 + B2_Mm2 SINE B2 153 195 0 2 1638 238 316 92 0 chrX 138116306 138116382 -28533914 + ID2 SINE ID 1 83 0 2 1638 303 268 11 23 chrX 138116573 138116661 -28533635 - MTEb LTR MaLR -15 364 278 2 1638 347 345 38 71 chrX 138116696 138116872 -28533424 - MTEb LTR MaLR -109 270 107 2 1638 3905 104 5 12 chrX 138116872 138117439 -28532857 - L1_Mus4 LINE L1 0 6636 6074 2 1638 347 345 38 71 chrX 138117439 138117474 -28532822 - MTEb LTR MaLR -273 106 67 2 1638 3260 28 5 8 chrX 138119117 138119509 -28530787 + L1Md_F3 LINE L1 6193 6583 -1 2 1638 405 0 0 0 chrX 138119745 138119790 -28530506 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 1638 234 0 0 0 chrX 138119790 138119815 -28530481 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1638 537 16 0 0 chrX 138119815 138119876 -28530420 + (GA)n Simple_repeat Simple_repeat 1 62 0 2 1638 474 318 45 19 chrX 138122258 138122412 -28527884 + RSINE1 SINE B4 3 160 -5 2 1638 4419 53 4 0 chrX 138124290 138124837 -28525459 - L1Md_F2 LINE L1 -3 6579 6031 2 1638 7596 67 18 20 chrX 138125711 138127472 -28522824 - L1Md_F2 LINE L1 -2 6636 4887 2 1638 750 68 0 0 chrX 138127470 138127573 -28522723 + L1_Mm LINE L1 4059 4161 -1722 2 1638 222 116 0 0 chrX 138127786 138127829 -28522467 + (TTTTTG)n Simple_repeat Simple_repeat 1 43 0 2 1638 212 100 25 0 chrX 138130073 138130113 -28520183 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 2 1638 330 271 38 99 chrX 138130938 138130979 -28519317 - L1M4b LINE L1 -3633 3701 3662 2 1638 2743 135 7 31 chrX 138130979 138131437 -28518859 - Lx2 LINE L1 -6 6991 6545 2 1638 213 94 0 0 chrX 138131438 138131470 -28518826 + (TTAA)n Simple_repeat Simple_repeat 4 35 0 2 1638 330 271 38 99 chrX 138131470 138131639 -28518657 - L1M4b LINE L1 -3673 3661 3502 2 1638 391 292 9 28 chrX 138131654 138131763 -28518533 - PB1D10 SINE Alu -10 107 1 2 1638 347 325 0 40 chrX 138131662 138131787 -28518509 - ID_B1 SINE B4 -45 179 60 2 1638 26 0 0 0 chrX 138131903 138131929 -28518367 + AT_rich Low_complexity Low_complexity 1 26 0 2 1638 983 94 7 7 chrX 138131929 138132068 -28518228 - B1_Mm SINE Alu 0 147 9 2 1638 580 275 29 37 chrX 138132310 138132552 -28517744 - L1MB8 LINE L1 -59 6119 5880 2 1638 1269 277 108 19 chrX 138132594 138132926 -28517370 - L1MB5 LINE L1 0 6174 5820 2 1638 333 0 0 0 chrX 138132926 138132963 -28517333 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1638 1269 277 108 19 chrX 138132963 138133249 -28517047 - L1MB5 LINE L1 -355 5819 5503 2 1638 1131 124 0 0 chrX 138133263 138133440 -28516856 + (TCTCC)n Simple_repeat Simple_repeat 4 180 0 2 1638 443 18 0 18 chrX 138133442 138133499 -28516797 + (TTCCC)n Simple_repeat Simple_repeat 5 60 0 2 1638 543 144 8 25 chrX 138133589 138133710 -28516586 - Lx4A LINE L1 -12 7046 6928 2 1638 298 239 64 28 chrX 138133737 138133881 -28516415 - L1MB5 LINE L1 -922 5390 5240 2 1638 640 62 10 0 chrX 138134019 138134116 -28516180 + L1_Mus3 LINE L1 6535 6632 -6 2 1638 6502 63 12 34 chrX 138134288 138135235 -28515061 - L1Md_F2 LINE L1 -3 6579 5654 2 1638 7656 67 4 6 chrX 138135236 138136295 -28514001 + L1Md_F2 LINE L1 4599 5655 -228 2 1638 1389 284 50 49 chrX 138136311 138137148 -28513148 - L1MB5 LINE L1 -1122 5024 4187 2 1638 234 0 0 0 chrX 138137153 138137179 -28513117 + (TTATA)n Simple_repeat Simple_repeat 4 29 0 2 1638 292 302 116 16 chrX 138137320 138137623 -28512673 - L1MB5 LINE L1 -2530 3616 3284 2 1638 1158 276 40 3 chrX 138137820 138138144 -28512152 - Lx6 LINE L1 -100 7360 7025 2 1638 309 89 0 0 chrX 138138144 138138189 -28512107 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2 1638 7436 109 63 35 chrX 138138191 138139514 -28510782 - Lx3A LINE L1 -7 6974 5615 2 1638 267 203 0 0 chrX 138139568 138139627 -28510669 + CT-rich Low_complexity Low_complexity 2 60 0 2 1638 319 106 0 0 chrX 138139646 138139693 -28510603 + U2 snRNA snRNA 1 47 -141 2 1638 2039 121 71 0 chrX 138139703 138140026 -28510270 - Lx2 LINE L1 0 6997 6652 2 1638 369 0 0 0 chrX 138140105 138140146 -28510150 + (TTA)n Simple_repeat Simple_repeat 3 43 0 2 1638 591 232 95 66 chrX 138140149 138140316 -28509980 - B3 SINE B2 -40 176 3 2 1638 620 266 13 25 chrX 138140350 138140508 -28509788 - RSINE1 SINE B4 -2 163 8 2 1638 970 289 37 20 chrX 138140819 138141168 -28509128 + Lx8 LINE L1 6905 7259 -214 2 1638 227 56 148 0 chrX 138141188 138141242 -28509054 + Lx9 LINE L1 7582 7643 -1 2 1638 657 236 12 128 chrX 138141324 138141567 -28508729 - B3 SINE B2 -1 215 1 2 1638 364 202 11 0 chrX 138141567 138141656 -28508640 - L1MB5 LINE L1 -3537 2609 2520 2 1638 357 254 60 99 chrX 138141678 138141910 -28508386 - L1MB5 LINE L1 -3734 2412 2190 2 1638 331 285 22 0 chrX 138143691 138143828 -28506468 - L1MA4 LINE L1 -451 5849 5710 2 1638 218 315 8 16 chrX 138144262 138144391 -28505905 + (TA)n Simple_repeat Simple_repeat 2 129 0 2 1638 2150 92 10 0 chrX 138145017 138145310 -28504986 - L1_Mus3 LINE L1 -7 6631 6336 2 1638 208 365 0 0 chrX 138146684 138146788 -28503508 + (CA)n Simple_repeat Simple_repeat 1 104 0 2 1638 234 0 0 0 chrX 138148709 138148735 -28501561 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 1639 307 231 220 8 chrX 138149891 138150009 -28500287 + MamRep1161 DNA TcMar 5 147 -810 2 1639 270 0 0 0 chrX 138151414 138151444 -28498852 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 1639 324 143 0 0 chrX 138151708 138151764 -28498532 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 1639 229 358 100 0 chrX 138152006 138152126 -28498170 + MIRb SINE MIR 3 134 -134 2 1639 234 0 0 0 chrX 138152317 138152343 -28497953 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 1639 279 0 0 0 chrX 138154315 138154346 -28495950 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1639 516 32 0 0 chrX 138161313 138161375 -28488921 + (TCTCC)n Simple_repeat Simple_repeat 2 63 0 2 1639 25 0 0 0 chrX 138162671 138162696 -28487600 + AT_rich Low_complexity Low_complexity 1 25 0 2 1639 413 271 20 13 chrX 138164834 138164950 -28485346 - PB1 SINE Alu -2 125 14 2 1639 193 324 14 27 chrX 138166138 138166211 -28484085 + L2b LINE L2 3304 3375 0 2 1639 913 132 0 0 chrX 138166575 138166711 -28483585 + L1_Mus4 LINE L1 6364 6499 -137 2 1639 443 180 184 83 chrX 138166711 138166820 -28483476 - B3 SINE B2 -75 120 1 2 1639 32 0 0 0 chrX 138166983 138167015 -28483281 + AT_rich Low_complexity Low_complexity 1 32 0 2 1639 535 274 0 0 chrX 138167230 138167354 -28482942 + Lx8 LINE L1 6804 6927 -546 2 1639 480 313 164 16 chrX 138167362 138167612 -28482684 + Lx8 LINE L1 7111 7397 -76 2 1639 198 0 0 0 chrX 138167666 138167688 -28482608 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 1639 315 0 0 0 chrX 138167688 138167722 -28482574 + (GA)n Simple_repeat Simple_repeat 1 35 0 2 1639 21 0 0 0 chrX 138167862 138167883 -28482413 + AT_rich Low_complexity Low_complexity 1 21 0 2 1639 1036 194 41 79 chrX 138167887 138167994 -28482302 - Lx9 LINE L1 -3 7641 7528 2 1639 297 0 0 0 chrX 138167994 138168027 -28482269 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 1639 1036 194 41 79 chrX 138168027 138168261 -28482035 - Lx9 LINE L1 -117 7527 7313 2 1639 972 181 0 17 chrX 138168282 138168456 -28481840 - Lx9 LINE L1 -309 7335 7165 2 1639 217 336 143 21 chrX 138168746 138168886 -28481410 - MIRb SINE MIR -92 176 20 2 1639 342 0 0 0 chrX 138169092 138169130 -28481166 + (T)n Simple_repeat Simple_repeat 1 38 0 2 1639 444 322 46 26 chrX 138169970 138170123 -28480173 + MLT1K LTR MaLR 92 247 -348 2 1639 266 356 0 14 chrX 138170090 138170164 -28480132 + MLT1K LTR MaLR 147 219 -376 2 1639 347 365 35 17 chrX 138170359 138170532 -28479764 + MLT1K LTR MaLR 410 585 -10 2 1639 487 312 107 15 chrX 138172658 138172863 -28477433 - MER2 DNA MER2_type -47 298 75 2 1639 4540 103 6 1 chrX 138173206 138173856 -28476440 + L1_Mus3 LINE L1 5930 6582 -56 2 1639 5726 140 74 10 chrX 138173859 138175340 -28474956 - Lx3C LINE L1 -65 6911 5307 2 1639 1715 81 7 55 chrX 138175340 138175614 -28474682 - L1Md_F2 LINE L1 0 6582 6322 2 1639 5726 112 20 8 chrX 138175614 138175907 -28474389 - Lx3C LINE L1 -580 5306 5016 2 1639 37863 31 0 0 chrX 138175924 138182407 -28467889 - L1Md_T LINE L1 0 6585 8 2 1639 545 179 0 0 chrX 138182409 138182504 -28467792 - Lx3C LINE L1 -858 5028 4934 2 1639 1050 97 7 0 chrX 138182879 138183023 -28467273 + B1_Mus1 SINE Alu 1 145 -3 2 1639 296 37 0 116 chrX 138183031 138183152 -28467144 + A-rich Low_complexity Low_complexity 1 107 0 2 1639 236 302 175 0 chrX 138183215 138183278 -28467018 + B1F SINE Alu 46 119 -1 2 1639 21 0 0 0 chrX 138184187 138184208 -28466088 + AT_rich Low_complexity Low_complexity 1 21 0 2 1639 263 244 149 16 chrX 138184514 138184635 -28465661 - L1MD3 LINE L1 -62 6297 6161 2 1639 291 332 18 20 chrX 138184660 138184824 -28465472 - L1MD3 LINE L1 -1981 6014 5851 2 1639 417 162 0 20 chrX 138184860 138184961 -28465335 - L1Md_F3 LINE L1 -2 6582 6484 2 1639 420 252 80 19 chrX 138186686 138186848 -28463448 + L1MC LINE L1 5003 5174 -972 2 1639 327 232 84 12 chrX 138186919 138187002 -28463294 + B3A SINE B2 80 168 -30 2 1639 368 271 0 0 chrX 138187184 138187269 -28463027 + Lx8 LINE L1 7048 7132 -341 2 1639 716 238 21 106 chrX 138187571 138187806 -28462490 + B3 SINE B2 2 216 0 2 1639 685 362 17 103 chrX 138188262 138188385 -28461911 - B4A SINE B4 -2 290 186 2 1639 1863 150 49 18 chrX 138188385 138188711 -28461585 - Lx2B LINE L1 -9 6991 6656 2 1639 685 362 17 103 chrX 138188711 138188889 -28461407 - B4A SINE B4 -107 185 15 2 1639 477 205 0 0 chrX 138189025 138189142 -28461154 + (TA)n Simple_repeat Simple_repeat 1 117 0 2 1639 842 173 0 26 chrX 138189182 138189336 -28460960 + B1_Mur4 SINE Alu 1 150 0 2 1639 206 224 0 0 chrX 138189338 138189396 -28460900 + A-rich Low_complexity Low_complexity 1 58 0 2 1639 259 316 49 37 chrX 138189420 138189584 -28460712 - L1M5 LINE L1 -544 5618 5453 2 1639 292 360 29 0 chrX 138189686 138189822 -28460474 + B1F SINE Alu 3 142 -7 2 1639 289 263 65 13 chrX 138189835 138189912 -28460384 + ID4_ SINE ID 1 81 -2 2 1639 285 136 30 15 chrX 138189981 138190048 -28460248 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 1639 1339 283 75 42 chrX 138190193 138190820 -28459476 - L1MB7 LINE L1 -133 6051 5404 2 1639 549 0 0 0 chrX 138191383 138191444 -28458852 + (CA)n Simple_repeat Simple_repeat 1 61 0 2 1639 679 168 8 16 chrX 138191496 138191617 -28458679 - PB1D9 SINE Alu 0 120 1 2 1639 646 245 7 20 chrX 138192202 138192352 -28457944 - B1_Mur4 SINE Alu 0 150 3 3 1639 446 293 16 8 chrX 138192858 138192982 -28457314 - B1F SINE Alu -8 141 17 3 1639 378 0 0 0 chrX 138192982 138193024 -28457272 + (TAA)n Simple_repeat Simple_repeat 2 43 0 3 1639 21 0 0 0 chrX 138193269 138193290 -28457006 + AT_rich Low_complexity Low_complexity 1 21 0 3 1639 189 0 0 0 chrX 138193290 138193311 -28456985 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 1639 484 298 88 50 chrX 138193334 138193595 -28456701 + B4 SINE B4 2 272 -20 3 1639 322 359 74 7 chrX 138193718 138194015 -28456281 - L1M5 LINE L1 -1316 4830 4514 3 1639 250 281 56 72 chrX 138194267 138194516 -28455780 - L1M5 LINE L1 -1942 4204 3960 3 1639 263 251 82 20 chrX 138194559 138194754 -28455542 - L1M5 LINE L1 -3155 2991 2785 3 1639 276 158 0 0 chrX 138194849 138194906 -28455390 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1639 227 246 58 58 chrX 138195022 138195091 -28455205 - ID4 SINE ID -3 80 12 3 1639 650 195 0 0 chrX 138195207 138195320 -28454976 + B3 SINE B2 2 114 -102 3 1639 16250 142 15 32 chrX 138195549 138199193 -28451103 - Lx LINE L1 -1 6653 3070 3 1639 5394 105 18 18 chrX 138199181 138200018 -28450278 + MusHAL1 LINE L1 1035 1871 -841 3 1639 349 212 131 0 chrX 138200146 138200245 -28450051 - MER2 DNA MER2_type -148 197 86 3 1639 1275 292 88 43 chrX 138200261 138201118 -28449178 - L1MA4 LINE L1 -1542 6102 5207 3 1639 1463 324 24 16 chrX 138201109 138201743 -28448553 - L1MA4 LINE L1 -1139 5004 4366 3 1639 718 191 0 22 chrX 138201779 138201913 -28448383 - B1_Mus1 SINE Alu -5 143 13 3 1639 288 263 119 0 chrX 138201926 138202044 -28448252 - L1MA4 LINE L1 -1818 4325 4191 3 1639 324 348 19 6 chrX 138202060 138202219 -28448077 - L1MA4 LINE L1 -3117 3026 2866 3 1639 861 223 290 20 chrX 138202224 138202672 -28447624 + Lx9 LINE L1 5829 6397 -1247 3 1639 3889 192 24 14 chrX 138202747 138203507 -28446789 + Lx9 LINE L1 6525 7291 -353 3 1639 1634 76 53 0 chrX 138203615 138203840 -28446456 - L1_Mus1 LINE L1 0 6567 6331 3 1639 4285 68 2 5 chrX 138204252 138204815 -28445481 + L1Md_F2 LINE L1 5026 5586 -297 3 1639 7914 56 0 5 chrX 138204815 138205804 -28444492 + L1Md_F2 LINE L1 5587 6570 -12 3 1639 1073 56 0 14 chrX 138206099 138206245 -28444051 + (TTTC)n Simple_repeat Simple_repeat 2 145 0 3 1639 1958 187 27 5 chrX 138206254 138206721 -28443575 - Lx4B LINE L1 -38 6962 6470 3 1639 420 356 53 25 chrX 138206730 138206975 -28443321 - MLT1J-int LTR MaLR -647 740 489 3 1639 459 0 0 0 chrX 138207260 138207311 -28442985 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1639 207 0 0 0 chrX 138207311 138207333 -28442963 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1639 559 258 77 0 chrX 138207362 138207517 -28442779 - RMER15 LTR ERVL -72 503 337 3 1639 281 279 34 34 chrX 138207600 138207689 -28442607 - RMER15 LTR ERVL -448 127 39 3 1639 595 275 150 60 chrX 138207761 138208028 -28442268 - B4A SINE B4 0 292 2 3 1639 263 275 68 12 chrX 138208231 138208393 -28441903 + HAL1 LINE L1 935 1105 -1402 3 1639 429 20 0 0 chrX 138208654 138208704 -28441592 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1639 234 345 0 0 chrX 138208871 138208955 -28441341 - BC1_Mm scRNA scRNA -63 89 6 3 1639 469 291 0 0 chrX 138209724 138209834 -28440462 + PB1D10 SINE Alu 3 112 -5 3 1639 567 0 0 0 chrX 138210317 138210380 -28439916 + (GA)n Simple_repeat Simple_repeat 1 63 0 3 1639 265 224 0 29 chrX 138210644 138210713 -28439583 + CT-rich Low_complexity Low_complexity 2 68 0 3 1639 254 293 54 106 chrX 138210718 138210833 -28439463 - B1F SINE Alu -8 141 5 3 1639 394 302 46 0 chrX 138210986 138211095 -28439201 - PB1D10 SINE Alu -3 124 1 3 1639 25 75 0 0 chrX 138211170 138211223 -28439073 + AT_rich Low_complexity Low_complexity 1 53 0 3 1639 495 232 79 5 chrX 138211389 138211540 -28438756 + MTD LTR MaLR 228 405 -14 3 1639 243 0 0 0 chrX 138211850 138211877 -28438419 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1639 655 107 8 6 chrX 138211884 138212002 -28438294 - B1_Mus1 SINE Alu 0 120 2 3 1639 2361 144 46 31 chrX 138212220 138212635 -28437661 - MTC LTR MaLR 0 421 1 3 1639 893 281 51 13 chrX 138213259 138213632 -28436664 + L1MDa LINE L1 1264 1701 -4932 3 1639 403 152 40 28 chrX 138213632 138213718 -28436578 + (CAGAGA)n Simple_repeat Simple_repeat 2 85 0 3 1639 203 0 37 0 chrX 138213718 138213745 -28436551 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1639 403 152 40 28 chrX 138213745 138213834 -28436462 + (CAGAGA)n Simple_repeat Simple_repeat 2 94 0 3 1639 228 100 0 0 chrX 138213861 138213901 -28436395 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1639 1571 67 40 22 chrX 138214120 138214348 -28435948 + L1Md_F2 LINE L1 6339 6570 -12 3 1639 1167 55 0 0 chrX 138214754 138214899 -28435397 + B1_Mus1 SINE Alu 1 145 -3 3 1639 423 0 0 0 chrX 138214899 138214946 -28435350 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 3 1639 310 333 19 0 chrX 138215464 138215572 -28434724 + PB1D10 SINE Alu 1 110 -7 3 1639 256 250 0 0 chrX 138215574 138215630 -28434666 + GA-rich Low_complexity Low_complexity 1 56 0 3 1639 2109 76 0 10 chrX 138215693 138216000 -28434296 - L1_Mm LINE L1 -4356 1527 1224 3 1639 2906 60 26 5 chrX 138216000 138216382 -28433914 + L1Md_F2 LINE L1 6182 6571 -11 3 1639 621 301 53 27 chrX 138216392 138216692 -28433604 + L1ME1 LINE L1 5731 6038 -141 3 1639 493 316 168 41 chrX 138217122 138217491 -28432805 - Charlie1b DNA MER1_type -87 436 21 3 1639 640 219 0 8 chrX 138217495 138217615 -28432681 + B3 SINE B2 3 121 -95 3 1639 32 0 0 0 chrX 138217966 138217998 -28432298 + AT_rich Low_complexity Low_complexity 1 32 0 3 1639 317 214 0 106 chrX 138218269 138218363 -28431933 + L2c LINE L2 3293 3376 -11 3 1639 7302 29 0 2 chrX 138220848 138221703 -28428593 - L1Md_F2 LINE L1 -16 6566 5714 3 1639 2545 284 67 77 chrX 138221708 138222676 -28427620 - Lx5 LINE L1 0 7050 6096 3 1639 294 29 0 0 chrX 138222676 138222711 -28427585 + (TC)n Simple_repeat Simple_repeat 1 35 0 3 1639 2545 289 67 47 chrX 138222711 138222775 -28427521 - Lx5 LINE L1 -955 6095 6004 3 1639 318 349 45 32 chrX 138223126 138223280 -28427016 + MER96 DNA hAT 20 175 0 3 1639 269 253 13 26 chrX 138224510 138224587 -28425709 + ID4_ SINE ID 4 79 -4 3 1639 4316 189 74 2 chrX 138224767 138225590 -28424706 - Lx5 LINE L1 -4 7046 6165 3 1639 282 328 50 28 chrX 138225635 138225776 -28424520 + B1F SINE Alu 4 147 -2 3 1639 201 39 0 0 chrX 138225783 138225809 -28424487 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 3 1639 1466 25 5 0 chrX 138225955 138226158 -28424138 + (TTTC)n Simple_repeat Simple_repeat 1 203 0 3 1639 189 171 0 0 chrX 138226158 138226193 -28424103 + CT-rich Low_complexity Low_complexity 1 35 0 3 1639 1376 50 0 11 chrX 138226193 138226375 -28423921 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 1639 257 152 30 0 chrX 138226897 138226963 -28423333 + (TCTCTG)n Simple_repeat Simple_repeat 2 69 0 3 1639 570 241 177 25 chrX 138227435 138227712 -28422584 - MamRep434 DNA TcMar -35 391 73 3 1639 4290 167 48 78 chrX 138228546 138229421 -28420875 - RMER19B LTR ERVK -53 849 1 3 1639 404 293 22 102 chrX 138229423 138229560 -28420736 - RSINE1 SINE B4 -38 127 2 3 1639 303 307 69 47 chrX 138229634 138229742 -28420554 + MT2B LTR ERVL 52 158 -426 3 1639 696 159 62 8 chrX 138229742 138229884 -28420412 + B1_Mur4 SINE Alu 1 147 0 3 1639 15290 68 2 7 chrX 138230183 138232922 -28417374 - L1Md_F2 LINE L1 0 6582 3859 3 1639 742 78 9 9 chrX 138232978 138233094 -28417202 + (GGA)n Simple_repeat Simple_repeat 3 118 0 3 1639 305 261 112 43 chrX 138233101 138233217 -28417079 + B2_Mm2 SINE B2 2 125 -70 3 1639 297 0 0 0 chrX 138233226 138233259 -28417037 + (TC)n Simple_repeat Simple_repeat 1 33 0 3 1639 549 64 0 0 chrX 138233259 138233336 -28416960 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 1639 1464 284 107 21 chrX 138233951 138234598 -28415698 + Tigger7 DNA MER2_type 2 785 -1706 3 1639 243 315 13 27 chrX 138234632 138234707 -28415589 + Tigger7 DNA MER2_type 2416 2489 -2 3 1639 21 36 0 0 chrX 138235164 138235192 -28415104 + AT_rich Low_complexity Low_complexity 1 28 0 3 1639 234 291 114 0 chrX 138236459 138236617 -28413679 + L1MEf LINE L1 1133 1308 -4892 3 1639 595 310 78 31 chrX 138236649 138236997 -28413299 - MLT1A1 LTR MaLR 0 365 3 3 1639 686 323 31 108 chrX 138237012 138237401 -28412895 - MLT1A1-int LTR MaLR -16 1719 1361 3 1639 302 303 37 59 chrX 138237429 138237699 -28412597 + L1M3 LINE L1 4128 4391 -1749 3 1639 261 0 0 0 chrX 138237719 138237748 -28412548 + (CAA)n Simple_repeat Simple_repeat 1 29 0 3 1639 513 236 50 21 chrX 138237957 138238157 -28412139 + L1M3 LINE L1 4895 5094 -1046 3 1639 985 309 63 48 chrX 138238160 138238744 -28411552 + Lx8 LINE L1 6850 7442 -31 3 1639 242 278 14 14 chrX 138238841 138238914 -28411382 + Lx8 LINE L1 7095 7167 -306 3 1639 618 272 171 50 chrX 138238929 138239168 -28411128 + MLT2B2 LTR ERVL 1 271 -244 3 1639 916 86 14 0 chrX 138239168 138239308 -28410988 + (TC)n Simple_repeat Simple_repeat 1 142 0 3 1639 302 247 11 129 chrX 138239308 138239324 -28410972 + MLT2B2 LTR ERVL 272 283 -232 3 1639 635 123 38 26 chrX 138239325 138239451 -28410845 - Lx7 LINE L1 -826 6870 6738 3 1639 14040 153 73 35 chrX 138239451 138240812 -28409484 - L1_Mur3 LINE L1 -1488 4392 2957 3 1639 3374 53 7 0 chrX 138240812 138241230 -28409066 - L1_Mus1 LINE L1 -1 6566 6146 3 1639 14040 157 58 30 chrX 138241230 138243710 -28406586 - L1_Mur3 LINE L1 -2924 2956 432 3 1639 389 321 38 17 chrX 138243755 138243992 -28406304 + L1MA4 LINE L1 5680 5921 -379 3 1639 363 23 0 0 chrX 138244104 138244148 -28406148 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1639 286 271 0 0 chrX 138244782 138244841 -28405455 + ID4 SINE ID 2 60 -23 3 1639 1116 203 84 109 chrX 138245056 138245256 -28405040 + ORR1C2 LTR MaLR 1 189 -195 3 1639 414 0 0 0 chrX 138245256 138245302 -28404994 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1639 1116 203 84 109 chrX 138245302 138245494 -28404802 + ORR1C2 LTR MaLR 190 383 -1 3 1639 1448 286 54 29 chrX 138246038 138246575 -28403721 - Lx6 LINE L1 -27 7433 6506 3 1639 625 261 8 7 chrX 138246593 138246748 -28403548 + Lx5 LINE L1 6223 6401 -657 3 1639 318 362 56 28 chrX 138247147 138247289 -28403007 - L1MDa LINE L1 -5942 691 546 3 1639 296 271 143 0 chrX 138247979 138248049 -28402247 - ID4_ SINE ID -69 83 4 3 1639 182 378 45 83 chrX 138248141 138248383 -28401913 + L2c LINE L2 3110 3342 -45 3 1639 315 161 0 0 chrX 138248475 138248531 -28401765 + (TATG)n Simple_repeat Simple_repeat 2 57 0 4 1639 571 288 0 0 chrX 138248896 138249035 -28401261 - B1_Mur1 SINE Alu -8 141 3 4 1639 28 0 0 0 chrX 138249042 138249070 -28401226 + AT_rich Low_complexity Low_complexity 1 28 0 4 1639 376 329 31 31 chrX 138249308 138249468 -28400828 + MER5A DNA MER1_type 2 161 -28 4 1639 325 247 71 25 chrX 138250027 138250232 -28400064 + L1ME2z LINE L1 6168 6414 -30 4 1639 242 346 0 47 chrX 138250621 138250706 -28399590 - L3 LINE CR1 -97 4392 4312 4 1639 555 56 0 0 chrX 138250727 138250798 -28399498 + (TCC)n Simple_repeat Simple_repeat 3 73 0 4 1639 522 316 10 10 chrX 138251677 138251869 -28398427 - B3A SINE B2 -6 192 1 4 1639 698 190 96 14 chrX 138251945 138252164 -28398132 + Lx9 LINE L1 7401 7637 -7 4 1639 405 105 299 11 chrX 138252245 138252332 -28397964 + L1_Mur3 LINE L1 4214 4325 -1555 4 1639 544 274 137 0 chrX 138253062 138253252 -28397044 + ID_B1 SINE B4 2 217 -7 4 1639 37769 31 0 0 chrX 138255303 138261564 -28388732 - L1Md_T LINE L1 0 6585 253 4 1639 339 25 0 0 chrX 138262596 138262636 -28387660 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1639 3262 66 0 2 chrX 138262706 138263130 -28387166 - L1_Mus2 LINE L1 0 6566 6144 4 1639 1034 285 6 43 chrX 138263130 138263478 -28386818 - Lx7 LINE L1 -820 6876 6542 4 1639 379 60 58 29 chrX 138263505 138263608 -28386688 + (TTTTG)n Simple_repeat Simple_repeat 1 106 0 4 1639 1056 43 36 0 chrX 138263608 138263747 -28386549 - B1_Mm SINE Alu 0 147 4 4 1639 311 335 52 69 chrX 138263778 138263951 -28386345 - MamRep1879 DNA hAT? -45 171 2 4 1639 22 0 0 0 chrX 138264153 138264175 -28386121 + AT_rich Low_complexity Low_complexity 1 22 0 4 1639 24 32 0 0 chrX 138264526 138264557 -28385739 + AT_rich Low_complexity Low_complexity 1 31 0 4 1639 446 269 101 0 chrX 138265006 138265125 -28385171 + Lx9 LINE L1 6858 6988 -656 4 1639 980 112 150 0 chrX 138265619 138265779 -28384517 - B2_Mm2 SINE B2 -10 185 2 4 1639 33195 72 0 17 chrX 138265975 138271095 -28379201 + L1Md_F2 LINE L1 557 5586 -297 4 1639 8035 49 2 3 chrX 138271095 138272080 -28378216 + L1Md_F2 LINE L1 5587 6570 -12 4 1639 5652 81 1 1 chrX 138272106 138272887 -28377409 - L1_Mus2 LINE L1 0 6566 5814 4 1639 1760 79 116 1 chrX 138272887 138273163 -28377133 - Lx4A LINE L1 -1035 6023 5734 4 1639 762 180 7 28 chrX 138273304 138273447 -28376849 - B1_Mus1 SINE Alu -6 142 3 4 1639 22 0 0 0 chrX 138273512 138273534 -28376762 + AT_rich Low_complexity Low_complexity 1 22 0 4 1639 212 387 43 55 chrX 138273565 138273654 -28376642 - ID_B1 SINE B4 -54 170 9 4 1639 223 413 0 0 chrX 138273654 138273729 -28376567 - ID4 SINE ID 0 83 9 4 1639 641 299 107 16 chrX 138273882 138274413 -28375883 + L1M5 LINE L1 5195 5776 -397 4 1639 310 300 0 0 chrX 138274830 138274890 -28375406 + ID4_ SINE ID 10 69 -14 4 1639 240 283 91 17 chrX 138275025 138275201 -28375095 + L1MA9 LINE L1 6084 6272 -40 4 1639 489 97 0 0 chrX 138275243 138275315 -28374981 + (TA)n Simple_repeat Simple_repeat 2 73 0 4 1639 286 100 0 0 chrX 138275356 138275396 -28374900 + B3 SINE B2 2 41 -175 4 1639 1073 101 0 0 chrX 138275396 138275544 -28374752 + B1_Mus1 SINE Alu 1 148 0 4 1639 220 0 27 54 chrX 138275544 138275581 -28374715 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 4 1639 694 241 116 17 chrX 138275585 138275758 -28374538 + B3 SINE B2 27 216 0 4 1639 21 0 0 0 chrX 138276030 138276051 -28374245 + AT_rich Low_complexity Low_complexity 1 21 0 4 1639 696 220 203 0 chrX 138276407 138276584 -28373712 - B3 SINE B2 -3 213 1 4 1639 1095 56 28 7 chrX 138276876 138277020 -28373276 - B1_Mus1 SINE Alu 0 148 2 4 1639 208 246 23 47 chrX 138277103 138277231 -28373065 + CT-rich Low_complexity Low_complexity 1 125 0 4 1639 190 226 18 54 chrX 138277279 138277335 -28372961 - L3 LINE CR1 -2705 1784 1731 4 1639 565 339 26 135 chrX 138277385 138277651 -28372645 + MER45B DNA Tip100 2 238 -802 4 1639 22 0 0 0 chrX 138277653 138277675 -28372621 + AT_rich Low_complexity Low_complexity 1 22 0 4 1639 339 187 27 0 chrX 138277724 138277799 -28372497 - L1_Rod LINE L1 -3923 1924 1848 4 1639 3542 42 2 2 chrX 138277805 138278236 -28372060 - L1Md_F2 LINE L1 -12 6570 6140 4 1639 761 302 78 7 chrX 138278323 138278630 -28371666 + MER45B DNA Tip100 365 693 -347 4 1639 1096 130 6 33 chrX 138278640 138278801 -28371495 + B2_Mm2 SINE B2 2 162 -33 4 1639 189 0 0 0 chrX 138278801 138278822 -28371474 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 4 1639 1096 130 6 33 chrX 138278822 138278843 -28371453 + B2_Mm2 SINE B2 163 179 -16 4 1639 334 293 49 80 chrX 138278874 138279100 -28371196 + MER45B DNA Tip100 727 945 -95 4 1639 1269 51 11 6 chrX 138279375 138279552 -28370744 + L1_Mus3 LINE L1 6459 6636 -2 4 1639 954 269 20 5 chrX 138279924 138280126 -28370170 + B3 SINE B2 4 208 -8 4 1639 24 32 0 0 chrX 138280166 138280197 -28370099 + AT_rich Low_complexity Low_complexity 1 31 0 4 1639 607 281 83 6 chrX 138280208 138280401 -28369895 - B3A SINE B2 -8 208 5 4 1640 488 334 56 77 chrX 138281863 138282200 -28368096 - Lx8 LINE L1 -9 7464 7135 4 1640 633 377 35 70 chrX 138282294 138282691 -28367605 + MLT1N2 LTR MaLR 38 420 -142 4 1640 1288 63 0 10 chrX 138282738 138282949 -28367347 + (TCC)n Simple_repeat Simple_repeat 1 208 0 4 1640 457 331 29 0 chrX 138283809 138284054 -28366242 - L1MC LINE L1 -2314 5568 5317 4 1640 21 0 0 0 chrX 138284200 138284221 -28366075 + AT_rich Low_complexity Low_complexity 1 21 0 4 1640 528 16 0 0 chrX 138284320 138284381 -28365915 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1640 306 0 0 0 chrX 138284471 138284505 -28365791 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 4 1640 229 331 46 46 chrX 138284563 138284693 -28365603 - ID_B1 SINE B4 -92 132 3 4 1640 483 155 0 0 chrX 138284723 138284807 -28365489 + T-rich Low_complexity Low_complexity 1 84 0 4 1640 1159 82 0 0 chrX 138284807 138284953 -28365343 - B1_Mus2 SINE Alu 0 147 2 4 1640 443 246 0 0 chrX 138285022 138285136 -28365160 + (TA)n Simple_repeat Simple_repeat 2 115 0 4 1640 22 35 0 0 chrX 138285160 138285189 -28365107 + AT_rich Low_complexity Low_complexity 1 29 0 4 1640 192 40 0 0 chrX 138286391 138286416 -28363880 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 1640 471 100 0 0 chrX 138287286 138287356 -28362940 + L1_Mus2 LINE L1 6488 6557 -9 4 1640 3095 43 28 18 chrX 138287351 138287750 -28362546 + L1Md_F3 LINE L1 6180 6582 -2 4 1640 26 0 0 0 chrX 138287750 138287776 -28362520 + AT_rich Low_complexity Low_complexity 1 26 0 4 1640 595 301 108 4 chrX 138288976 138289204 -28361092 + MIR SINE MIR 2 247 -21 4 1640 1757 55 0 0 chrX 138289259 138289479 -28360817 + L1_Mus1 LINE L1 6342 6561 -6 4 1640 425 273 35 14 chrX 138289590 138289735 -28360561 + MamRep434 DNA TcMar 279 426 0 4 1640 1042 277 118 52 chrX 138291572 138292144 -28358152 - L1ME1 LINE L1 -2 6177 5593 4 1640 2719 55 3 22 chrX 138292144 138292500 -28357796 + L1_Mus2 LINE L1 6218 6566 0 4 1640 1042 275 78 33 chrX 138292500 138292916 -28357380 - L1ME1 LINE L1 -587 5592 5128 4 1640 306 260 0 52 chrX 138293147 138293223 -28357073 - MER63D DNA AcHobo -787 274 203 4 1640 1022 122 0 0 chrX 138293223 138293371 -28356925 + B1_Mus1 SINE Alu 1 148 0 4 1640 362 228 41 51 chrX 138293536 138293759 -28356537 + L1M1 LINE L1 5259 5486 -811 4 1640 680 151 53 38 chrX 138293772 138293903 -28356393 + B1_Mm SINE Alu 14 146 -1 4 1640 441 0 0 0 chrX 138293903 138293952 -28356344 + (GA)n Simple_repeat Simple_repeat 1 49 0 4 1640 549 0 0 0 chrX 138293952 138294013 -28356283 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 4 1640 1509 23 0 0 chrX 138294013 138294190 -28356106 + (GGGAA)n Simple_repeat Simple_repeat 2 178 0 4 1640 791 93 0 8 chrX 138294191 138294310 -28355986 + (GAA)n Simple_repeat Simple_repeat 3 120 0 4 1640 725 292 27 27 chrX 138294310 138294609 -28355687 + L1M1 LINE L1 5497 5795 -508 4 1640 423 0 0 0 chrX 138294663 138294710 -28355586 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 1640 389 145 13 0 chrX 138294710 138294786 -28355510 + (TG)n Simple_repeat Simple_repeat 1 77 0 4 1640 369 259 104 22 chrX 138295194 138295328 -28354968 + B1F SINE Alu 5 149 0 4 1640 572 275 12 24 chrX 138295330 138295494 -28354802 + RSINE1 SINE B4 2 163 -2 4 1640 22 0 0 0 chrX 138295510 138295532 -28354764 + AT_rich Low_complexity Low_complexity 1 22 0 4 1640 953 270 54 36 chrX 138295626 138295906 -28354390 + B4A SINE B4 2 286 -6 4 1640 245 29 29 0 chrX 138296387 138296421 -28353875 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1640 354 353 40 13 chrX 138297073 138297225 -28353071 + MIRb SINE MIR 7 162 -106 4 1640 218 136 0 22 chrX 138297428 138297473 -28352823 + (TTAA)n Simple_repeat Simple_repeat 2 45 0 4 1640 633 292 23 28 chrX 138297478 138297693 -28352603 - ID_B1 SINE B4 -9 215 2 4 1640 1463 53 15 45 chrX 138297952 138298150 -28352146 - B2_Mm2 SINE B2 -2 193 2 4 1640 2627 176 79 11 chrX 138298322 138298852 -28351444 + RMER1B Other Other 500 1065 -1 4 1640 1598 191 192 81 chrX 138299139 138299619 -28350677 - MT2A LTR ERVL 0 533 1 4 1640 819 239 66 5 chrX 138299832 138300030 -28350266 + Lx9 LINE L1 7183 7392 -252 4 1640 648 59 0 0 chrX 138300067 138300152 -28350144 + (GA)n Simple_repeat Simple_repeat 1 85 0 4 1640 252 275 0 52 chrX 138300684 138300780 -28349516 - MIR3 SINE MIR -15 193 103 4 1640 207 0 0 0 chrX 138303391 138303414 -28346882 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1640 628 319 25 25 chrX 138303496 138303779 -28346517 - B4A SINE B4 -9 283 1 4 1640 243 0 0 0 chrX 138305481 138305508 -28344788 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1640 1103 64 7 0 chrX 138305511 138305651 -28344645 - B1_Mus2 SINE Alu -6 141 1 5 1640 1393 108 19 5 chrX 138305683 138305898 -28344398 + Lx LINE L1 6426 6643 -11 5 1640 261 0 0 0 chrX 138305898 138305927 -28344369 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1640 303 293 0 42 chrX 138305946 138306042 -28344254 - HAL1b LINE L1 -516 1493 1402 5 1640 704 276 52 14 chrX 138306312 138306525 -28343771 - MER97c DNA MER1_type? -856 234 14 5 1640 349 278 56 37 chrX 138306718 138306945 -28343351 - L1MEe LINE L1 -861 1646 1425 5 1640 819 158 99 22 chrX 138306990 138307112 -28343184 + B2_Mm2 SINE B2 1 122 -73 5 1640 198 0 0 0 chrX 138307112 138307134 -28343162 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 1640 819 158 99 22 chrX 138307134 138307192 -28343104 + B2_Mm2 SINE B2 123 194 -1 5 1640 1077 57 21 14 chrX 138307358 138307493 -28342803 + B1_Mus1 SINE Alu 1 138 -10 5 1640 198 0 0 0 chrX 138307493 138307515 -28342781 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 5 1640 453 103 0 0 chrX 138307666 138307734 -28342562 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 1640 4287 105 96 54 chrX 138308062 138308899 -28341397 + RMER17A2 LTR ERVK 31 902 -4 5 1640 239 0 0 31 chrX 138310535 138310567 -28339729 + (CCCCCA)n Simple_repeat Simple_repeat 3 33 0 5 1640 342 324 36 9 chrX 138311039 138311151 -28339145 + PB1D10 SINE Alu 1 115 -2 5 1640 336 343 92 16 chrX 138311168 138311352 -28338944 - HAL1 LINE L1 -66 2441 2244 5 1640 332 328 80 0 chrX 138311657 138311782 -28338514 - HAL1 LINE L1 -702 1805 1671 5 1640 330 80 0 0 chrX 138312132 138312182 -28338114 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 1640 352 317 116 0 chrX 138312285 138312484 -28337812 - L1MEg LINE L1 -3373 3633 3412 5 1640 188 321 0 18 chrX 138312522 138312579 -28337717 + MIRm SINE MIR 16 71 -205 5 1640 1439 24 0 0 chrX 138312739 138312908 -28337388 + L1_Mus1 LINE L1 6399 6567 0 5 1640 395 231 13 0 chrX 138313188 138313266 -28337030 - PB1D7 SINE Alu -41 79 1 5 1640 237 348 22 22 chrX 138313266 138313293 -28337003 - B4 SINE B4 -206 86 60 5 1640 402 147 0 0 chrX 138313416 138313484 -28336812 + (TA)n Simple_repeat Simple_repeat 2 69 0 5 1640 8251 14 8 0 chrX 138313570 138314677 -28335619 - L1Md_A LINE L1 0 6582 5467 5 1640 231 282 83 33 chrX 138315125 138315152 -28335144 - L1MEg LINE L1 -5155 2179 2153 5 1640 430 206 349 0 chrX 138315152 138315298 -28334998 + B3A SINE B2 2 198 0 5 1640 382 294 56 30 chrX 138315298 138315463 -28334833 - L1MEg LINE L1 -4846 2256 2053 5 1640 1375 91 16 0 chrX 138315463 138315650 -28334646 - B2_Mm2 SINE B2 -4 191 2 5 1640 382 304 84 35 chrX 138315650 138315939 -28334357 - L1MEg LINE L1 -4981 2121 1768 5 1640 21 0 0 0 chrX 138316022 138316043 -28334253 + AT_rich Low_complexity Low_complexity 1 21 0 5 1640 463 279 30 11 chrX 138317100 138317363 -28332933 + L1MA4A LINE L1 5662 5936 -364 5 1640 1184 199 130 40 chrX 138317890 138318001 -28332295 + RMER17C LTR ERVK 1 123 -287 5 1640 684 11 21 11 chrX 138318001 138318095 -28332201 + (TTCTC)n Simple_repeat Simple_repeat 5 99 0 5 1640 1184 199 130 40 chrX 138318095 138318359 -28331937 + RMER17C LTR ERVK 124 409 -1 5 1640 288 0 0 0 chrX 138319681 138319713 -28330583 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 1640 449 219 0 47 chrX 138319953 138320039 -28330257 - ID4_ SINE ID -1 82 1 5 1640 408 370 19 19 chrX 138320083 138320298 -28329998 + MIR SINE MIR 6 220 -42 5 1640 41 58 0 0 chrX 138320298 138320367 -28329929 + AT_rich Low_complexity Low_complexity 1 69 0 5 1640 742 262 58 65 chrX 138320659 138320969 -28329327 + Lx9 LINE L1 7260 7567 -77 5 1640 210 143 0 0 chrX 138321011 138321046 -28329250 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 1640 740 125 0 24 chrX 138321381 138321504 -28328792 + B1_Mur4 SINE Alu 31 150 0 5 1640 302 201 31 0 chrX 138321504 138321640 -28328656 + GA-rich Low_complexity Low_complexity 1 140 0 5 1640 548 29 14 0 chrX 138323230 138323300 -28326996 + (GA)n Simple_repeat Simple_repeat 2 72 0 5 1640 279 0 0 0 chrX 138323362 138323393 -28326903 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1640 450 0 0 0 chrX 138324079 138324129 -28326167 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 1640 2327 102 117 11 chrX 138325902 138326269 -28324027 - Lx4A LINE L1 -4 7054 6649 5 1640 1666 121 5 196 chrX 138326334 138326875 -28323421 + RMER17C LTR ERVK 16 439 -519 5 1640 230 0 33 0 chrX 138326884 138326914 -28323382 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1640 36189 30 0 0 chrX 138326964 138333627 -28316669 - L1Md_T LINE L1 0 6585 1 5 1640 533 332 117 21 chrX 138333836 138334076 -28316220 - MTE2b LTR MaLR -36 343 81 5 1640 1759 27 0 0 chrX 138334076 138334297 -28315999 + L1_Mm LINE L1 4200 4420 -1463 5 1640 2706 28 2 216 chrX 138334297 138334793 -28315503 - RLTR10 LTR ERVK 0 390 1 5 1640 15827 32 9 10 chrX 138334795 138336800 -28313496 - RLTR10-int LTR ERVK -3 1984 5 5 1640 2593 34 2 218 chrX 138336803 138337295 -28313001 - RLTR10 LTR ERVK -4 386 1 5 1640 8851 61 0 1 chrX 138337295 138338468 -28311828 + L1Md_F2 LINE L1 4415 5586 -297 5 1640 8164 48 0 0 chrX 138338468 138339454 -28310842 + L1Md_F2 LINE L1 5587 6572 -10 5 1640 387 244 47 0 chrX 138339457 138339543 -28310753 - MTE2b LTR MaLR -289 90 1 5 1640 208 219 12 12 chrX 138339754 138339837 -28310459 + (TA)n Simple_repeat Simple_repeat 1 83 0 5 1640 255 227 5 185 chrX 138339848 138340059 -28310237 - Lx9 LINE L1 -1359 6285 6113 5 1640 390 323 12 19 chrX 138340093 138340254 -28310042 - Lx9 LINE L1 -1677 5967 5808 5 1640 1331 314 51 6 chrX 138340251 138340761 -28309535 + Lx9 LINE L1 6499 7031 -613 5 1640 2170 86 0 16 chrX 138340774 138341081 -28309215 + L1Md_F2 LINE L1 6269 6570 -12 5 1640 321 287 28 41 chrX 138341143 138341361 -28308935 + Lx9 LINE L1 7298 7512 -132 5 1640 216 135 0 0 chrX 138341378 138341415 -28308881 + (TATG)n Simple_repeat Simple_repeat 3 39 0 5 1640 226 250 59 0 chrX 138341629 138341697 -28308599 - MER113A DNA MER1_type -208 106 35 5 1640 380 194 312 0 chrX 138341954 138342047 -28308249 + B1_Mus1 SINE Alu 4 125 -23 5 1640 200 152 0 42 chrX 138342053 138342101 -28308195 + GA-rich Low_complexity Low_complexity 4 49 0 5 1640 234 0 0 0 chrX 138342110 138342136 -28308160 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 5 1640 587 196 122 11 chrX 138343531 138343695 -28306601 - B3 SINE B2 -24 171 1 5 1640 1436 230 0 17 chrX 138343864 138344160 -28306136 - Lx5 LINE L1 -102 6948 6658 5 1640 587 334 54 54 chrX 138344273 138344659 -28305637 - MARNA DNA Mariner -21 565 180 5 1640 320 280 20 10 chrX 138344699 138344800 -28305496 - Tigger16b DNA Tigger -67 270 169 5 1640 236 310 101 0 chrX 138345362 138345491 -28304805 - L2 LINE L2 -1447 1972 1831 5 1640 282 148 0 0 chrX 138345716 138345770 -28304526 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 1640 834 289 74 42 chrX 138345770 138345906 -28304390 - MLT2B4 LTR ERVL -162 394 266 5 1640 1149 88 0 0 chrX 138345906 138346053 -28304243 + B1_Mus2 SINE Alu 1 147 0 5 1640 834 289 74 42 chrX 138346053 138346200 -28304096 - MLT2B4 LTR ERVL -291 265 102 5 1640 380 333 0 10 chrX 138346200 138346297 -28303999 + PB1D10 SINE Alu 1 96 -21 5 1640 957 83 0 0 chrX 138346299 138346432 -28303864 + L1_Mus1 LINE L1 6435 6567 0 5 1640 22 35 0 0 chrX 138346538 138346567 -28303729 + AT_rich Low_complexity Low_complexity 1 29 0 5 1640 31067 86 3 3 chrX 138346992 138352181 -28298115 + L1Md_F2 LINE L1 218 5585 -298 5 1640 7516 78 2 2 chrX 138352182 138353176 -28297120 + L1Md_F2 LINE L1 5587 6580 -2 5 1640 498 196 0 0 chrX 138355495 138355597 -28294699 + GA-rich Low_complexity Low_complexity 3 104 0 5 1640 417 283 168 12 chrX 138356896 138357229 -28293067 + L1M4 LINE L1 3100 3484 -2662 5 1640 414 0 0 0 chrX 138357360 138357406 -28292890 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1640 9137 121 15 7 chrX 138357493 138359061 -28291235 - Lx4A LINE L1 0 7058 5472 5 1640 262 286 47 18 chrX 138359084 138359255 -28291041 + L1M4 LINE L1 3572 3747 -2399 5 1640 1279 223 110 12 chrX 138359424 138359769 -28290527 + MTEb LTR MaLR 1 379 0 5 1640 280 262 11 15 chrX 138360773 138360897 -28289399 + L1M4 LINE L1 3762 3882 -2264 5 1640 272 299 26 53 chrX 138360925 138361038 -28289258 + B1F SINE Alu 39 148 -1 5 1640 239 235 111 0 chrX 138361090 138361171 -28289125 + L1M4 LINE L1 3901 3990 -2156 5 1640 1289 279 18 41 chrX 138361255 138361820 -28288476 + L1M4 LINE L1 3972 4523 -1623 5 1640 403 277 196 65 chrX 138361874 138362276 -28288020 + L1M4 LINE L1 4633 5087 -1059 5 1640 228 224 42 115 chrX 138362554 138362650 -28287646 - MER3 DNA MER1_type 0 209 121 5 1640 291 368 0 0 chrX 138362652 138362720 -28287576 + PB1D10 SINE Alu 1 68 -49 5 1640 758 250 36 0 chrX 138362882 138363050 -28287246 - B3A SINE B2 -24 174 1 5 1640 23 0 0 0 chrX 138363116 138363139 -28287157 + AT_rich Low_complexity Low_complexity 1 23 0 5 1640 227 344 0 21 chrX 138363214 138363309 -28286987 - BC1_Mm scRNA scRNA -57 95 3 5 1640 760 281 132 53 chrX 138364652 138364956 -28285340 - MER58B DNA MER1_type -13 328 1 5 1640 427 261 11 0 chrX 138364991 138365079 -28285217 + PB1D10 SINE Alu 9 97 -20 5 1640 340 339 48 32 chrX 138365079 138365116 -28285180 + ID_B1 SINE B4 90 216 -8 5 1640 334 248 162 0 chrX 138365179 138365296 -28285000 - B1F SINE Alu -13 136 1 5 1640 201 279 0 0 chrX 138365914 138365982 -28284314 + (TCTCTG)n Simple_repeat Simple_repeat 3 70 0 5 1640 668 291 77 59 chrX 138368258 138368598 -28281698 + MamRep434 DNA TcMar 80 425 -1 5 1640 243 312 0 0 chrX 138369590 138369654 -28280642 - ID4_ SINE ID -18 65 2 5 1640 275 311 48 70 chrX 138369656 138369756 -28280540 - PB1D10 SINE Alu -35 114 11 5 1640 617 280 143 13 chrX 138369938 138370246 -28280050 - Lx7 LINE L1 -395 7301 6954 5 1640 2318 280 50 32 chrX 138370239 138371092 -28279204 - Lx7 LINE L1 -938 6758 5890 5 1640 43 20 0 0 chrX 138371124 138371174 -28279122 + AT_rich Low_complexity Low_complexity 1 50 0 5 1640 595 307 77 5 chrX 138371188 138371692 -28278604 - L1ME2 LINE L1 -29 7171 6618 5 1640 280 306 80 12 chrX 138372059 138372221 -28278075 - L1ME2 LINE L1 -620 6580 6408 5 1640 366 23 0 0 chrX 138372221 138372264 -28278032 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 1640 318 26 0 0 chrX 138372264 138372302 -28277994 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1640 700 300 63 29 chrX 138372315 138372573 -28277723 - B4A SINE B4 -2 290 21 5 1640 420 320 94 38 chrX 138372641 138373127 -28277169 - L1ME2 LINE L1 -1048 6119 5604 5 1640 265 290 290 0 chrX 138373174 138373274 -28277022 - B1F2 SINE Alu -17 132 4 5 1640 978 90 200 0 chrX 138373356 138373511 -28276785 + B2_Mm1t SINE B2 3 188 -5 5 1640 415 252 60 25 chrX 138373514 138373799 -28276497 - L1ME2 LINE L1 -1701 5460 5166 5 1640 1255 63 6 6 chrX 138373827 138374002 -28276294 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 5 1640 720 209 0 57 chrX 138374038 138374195 -28276101 - B1_Mur3 SINE Alu 0 149 2 5 1640 514 284 19 9 chrX 138374380 138374593 -28275703 - L1ME2 LINE L1 -2115 5046 4832 5 1640 419 368 51 31 chrX 138374771 138374967 -28275329 - ORR1E LTR MaLR -159 200 1 5 1640 684 294 67 69 chrX 138374973 138375012 -28275284 - L1ME2 LINE L1 -2375 4786 4740 5 1640 4377 36 8 8 chrX 138375012 138375542 -28274754 + L1Md_T LINE L1 6053 6582 0 5 1640 684 294 67 69 chrX 138375542 138375641 -28274655 - L1ME2 LINE L1 -2422 4739 4651 5 1640 579 273 116 20 chrX 138375641 138375839 -28274457 + ID_B1 SINE B4 2 218 -6 6 1640 684 294 67 69 chrX 138375839 138376266 -28274030 - L1ME2 LINE L1 -2511 4650 4221 5 1640 334 276 72 56 chrX 138376394 138376643 -28273653 + L1M2 LINE L1 5111 5363 -780 6 1640 544 192 0 0 chrX 138376781 138376901 -28273395 - Lx9 LINE L1 -7 7637 7518 6 1640 231 114 0 0 chrX 138376915 138376959 -28273337 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1640 1494 216 111 29 chrX 138376979 138377438 -28272858 + RMER19C LTR ERVK 183 664 -238 6 1640 369 0 0 0 chrX 138377438 138377479 -28272817 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1640 263 158 53 0 chrX 138377484 138377541 -28272755 - Lx9 LINE L1 -190 7454 7395 6 1640 1934 154 102 8 chrX 138377546 138377763 -28272533 - ORR1B1 LTR MaLR -8 386 155 6 1640 1044 100 0 12 chrX 138377763 138377925 -28272371 + L1Md_F2 LINE L1 6411 6570 -12 6 1640 1934 154 102 8 chrX 138377925 138378060 -28272236 - ORR1B1 LTR MaLR -240 154 1 6 1640 480 179 42 0 chrX 138378060 138378155 -28272141 - Lx9 LINE L1 -245 7399 7301 6 1640 238 265 0 0 chrX 138379303 138379371 -28270925 - L1ME2 LINE L1 -3963 3198 3131 5 1640 356 312 35 28 chrX 138379755 138380061 -28270235 - L1ME2 LINE L1 -4161 3007 2776 5 1640 1592 204 57 32 chrX 138380110 138380480 -28269816 - MTD LTR MaLR 0 419 41 6 1640 1566 193 70 20 chrX 138380483 138380827 -28269469 + ORR1D1 LTR MaLR 14 374 0 6 1640 507 273 21 28 chrX 138381025 138381168 -28269128 - ID_B1 SINE B4 -2 222 81 6 1640 245 295 0 120 chrX 138381269 138381377 -28268919 - PB1D7 SINE Alu -7 113 19 6 1640 573 15 0 0 chrX 138381422 138381488 -28268808 + (TC)n Simple_repeat Simple_repeat 2 67 0 6 1640 272 354 8 16 chrX 138381607 138381736 -28268560 - Tigger5 DNA MER2_type -3 2403 2276 6 1640 657 316 59 14 chrX 138381708 138381848 -28268448 - Tigger5 DNA MER2_type -2163 243 97 6 1640 375 23 0 0 chrX 138381848 138381892 -28268404 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 1640 657 316 59 14 chrX 138381892 138381972 -28268324 - Tigger5 DNA MER2_type -2310 96 19 6 1640 256 299 0 15 chrX 138382207 138382337 -28267959 - L1ME2 LINE L1 -5137 2031 1907 5 1640 1494 228 33 92 chrX 138383365 138383910 -28266386 - Lx7 LINE L1 0 7696 7184 6 1640 1568 186 38 9 chrX 138384269 138384589 -28265707 + Lx5 LINE L1 6722 7050 0 6 1640 705 24 0 0 chrX 138384625 138384708 -28265588 + (TA)n Simple_repeat Simple_repeat 1 83 0 6 1640 22 56 0 0 chrX 138385164 138385200 -28265096 + AT_rich Low_complexity Low_complexity 1 36 0 6 1640 1901 122 91 18 chrX 138385299 138385693 -28264603 - Lx4B LINE L1 -812 6246 5824 6 1640 767 203 268 32 chrX 138385694 138386104 -28264192 + Lx4B LINE L1 6551 7057 -1 6 1640 210 37 0 0 chrX 138386501 138386528 -28263768 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1640 362 126 9 55 chrX 138387765 138387874 -28262422 + C-rich Low_complexity Low_complexity 4 107 0 6 1640 850 342 48 22 chrX 138388614 138388792 -28261504 + L1MA9 LINE L1 1 188 -5953 6 1640 324 0 0 0 chrX 138388792 138388828 -28261468 + (TTA)n Simple_repeat Simple_repeat 2 37 0 6 1640 850 342 48 22 chrX 138388828 138389061 -28261235 + L1MA9 LINE L1 189 422 -5719 6 1640 392 256 127 8 chrX 138389333 138389459 -28260837 + RMER5 LTR ERV1 40 180 -354 6 1640 357 139 36 18 chrX 138389546 138389656 -28260640 + (TA)n Simple_repeat Simple_repeat 1 112 0 6 1640 487 116 0 0 chrX 138389683 138389752 -28260544 - B1_Mus1 SINE Alu -78 70 2 6 1640 3922 79 62 2 chrX 138389752 138390299 -28259997 - L1VL2 LINE L1 -5472 863 284 6 1640 483 277 36 0 chrX 138390309 138390446 -28259850 + RMER5 LTR ERV1 163 304 -230 6 1640 221 75 0 24 chrX 138390446 138390487 -28259809 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 6 1640 1050 56 0 27 chrX 138390491 138390637 -28259659 - B1_Mm SINE Alu 0 147 6 6 1640 948 225 113 17 chrX 138390825 138391169 -28259127 + L1MA9 LINE L1 3333 3709 -2495 6 1640 457 269 119 45 chrX 138391200 138391469 -28258827 + L1MA9 LINE L1 5567 5855 -500 6 1640 355 368 0 0 chrX 138391544 138391639 -28258657 + PB1D10 SINE Alu 8 102 -15 6 1640 827 267 118 10 chrX 138391667 138391932 -28258364 + L1MA9 LINE L1 5879 6156 -220 6 1640 408 40 0 0 chrX 138391932 138391982 -28258314 + (TA)n Simple_repeat Simple_repeat 1 50 0 6 1640 827 267 118 10 chrX 138391982 138392106 -28258190 + L1MA9 LINE L1 6157 6309 -67 6 1640 310 298 109 23 chrX 138392200 138392375 -28257921 + L1MEc LINE L1 717 906 -5494 6 1640 218 305 0 17 chrX 138392480 138392600 -28257696 + A-rich Low_complexity Low_complexity 2 119 0 6 1640 393 22 0 0 chrX 138393115 138393161 -28257135 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 1640 297 171 57 0 chrX 138393173 138393243 -28257053 + Lx9 LINE L1 7569 7642 -2 6 1640 2820 56 58 13 chrX 138393320 138393699 -28256597 - MTA_Mm LTR MaLR 0 396 1 6 1640 1486 189 18 56 chrX 138394109 138394451 -28255845 - ORR1A4 LTR MaLR 0 329 1 6 1640 1463 124 27 19 chrX 138394703 138394715 -28255581 - Lx3C LINE L1 -2 6974 6964 6 1640 928 54 139 0 chrX 138394715 138394844 -28255452 - B1_Mm SINE Alu 0 147 1 6 1640 1463 124 27 19 chrX 138394844 138395094 -28255202 - Lx3C LINE L1 -13 6963 6710 6 1640 1715 274 89 21 chrX 138395740 138396024 -28254272 - Lx9 LINE L1 -235 7409 7093 6 1640 983 75 0 36 chrX 138396024 138396162 -28254134 + B1_Mus2 SINE Alu 1 133 -14 6 1640 1715 274 89 21 chrX 138396162 138396452 -28253844 - Lx9 LINE L1 -552 7092 6796 6 1640 6769 196 65 42 chrX 138398048 138399623 -28250673 - Lx7 LINE L1 0 7696 6087 6 1640 2663 167 42 39 chrX 138399645 138400186 -28250110 - L1_Mur3 LINE L1 -767 5113 4571 6 1640 855 270 22 18 chrX 138400182 138400457 -28249839 - L1M2 LINE L1 -1210 4933 4658 6 1640 398 330 51 46 chrX 138400913 138401110 -28249186 - MIR SINE MIR -52 210 13 6 1640 2425 306 53 71 chrX 138401272 138402466 -28247830 + L1MDa LINE L1 19 1190 -5443 6 1640 419 239 9 0 chrX 138402682 138402791 -28247505 + L1M2 LINE L1 5677 5786 -505 6 1640 1172 81 0 0 chrX 138402831 138402979 -28247317 + B1_Mus1 SINE Alu 1 148 0 6 1640 245 53 53 0 chrX 138402979 138403017 -28247279 + (GAAA)n Simple_repeat Simple_repeat 3 42 0 6 1640 623 290 123 26 chrX 138403046 138403548 -28246748 + L1MDa LINE L1 1643 2193 -4440 6 1640 482 235 152 42 chrX 138403555 138403764 -28246532 + L1MDa LINE L1 2427 2667 -3870 6 1640 3177 135 8 0 chrX 138403764 138404254 -28246042 + Lx2 LINE L1 6504 6997 0 6 1640 482 268 120 25 chrX 138404254 138404392 -28245904 + L1MDa LINE L1 2668 2813 -3724 6 1640 474 297 84 36 chrX 138404390 138404493 -28245803 + L1MDa LINE L1 2952 3061 -3476 6 1640 415 74 14 14 chrX 138404493 138404562 -28245734 + (TA)n Simple_repeat Simple_repeat 1 69 0 6 1640 474 297 84 36 chrX 138404562 138404814 -28245482 + L1MDa LINE L1 3062 3324 -3213 6 1640 1977 247 44 2 chrX 138404825 138405389 -28244907 + Lx8 LINE L1 4003 4590 -1290 6 1640 392 115 65 16 chrX 138405403 138405527 -28244769 + (TA)n Simple_repeat Simple_repeat 1 130 0 6 1640 3878 280 109 42 chrX 138405537 138407370 -28242926 + Lx8 LINE L1 5379 7334 -139 6 1640 324 241 168 0 chrX 138407377 138407568 -28242728 + L1MDa LINE L1 3309 3531 -3006 6 1640 2907 315 66 30 chrX 138407652 138408804 -28241492 - Lx8 LINE L1 -11 7462 6270 6 1640 360 278 125 12 chrX 138408817 138409065 -28241231 + L1MDa LINE L1 3890 4165 -2372 6 1640 390 254 0 0 chrX 138409065 138409175 -28241121 + (TA)n Simple_repeat Simple_repeat 1 110 0 6 1640 805 249 174 32 chrX 138409180 138409681 -28240615 + L1MDa LINE L1 4159 4730 -1807 6 1640 236 197 16 32 chrX 138409734 138409797 -28240499 + GA-rich Low_complexity Low_complexity 5 66 0 6 1640 230 291 90 0 chrX 138409851 138409985 -28240311 + L1MA6 LINE L1 6041 6186 -114 6 1640 291 257 0 0 chrX 138410061 138410135 -28240161 + Lx9 LINE L1 7246 7319 -325 6 1640 233 154 19 0 chrX 138410133 138410185 -28240111 + Lx9 LINE L1 7590 7642 -2 6 1640 301 257 18 35 chrX 138411079 138411192 -28239104 + GA-rich Low_complexity Low_complexity 3 113 0 6 1640 24 0 0 0 chrX 138411369 138411393 -28238903 + AT_rich Low_complexity Low_complexity 1 24 0 6 1640 438 20 0 0 chrX 138411485 138411536 -28238760 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1640 335 396 34 68 chrX 138411622 138411915 -28238381 + MTE-int LTR MaLR 752 1034 -546 6 1640 213 39 0 0 chrX 138411998 138412024 -28238272 + (TA)n Simple_repeat Simple_repeat 2 27 0 6 25 197 33 33 0 chrX 138412026 138412056 -28238240 + (TGGG)n Simple_repeat Simple_repeat 3 33 0 6 1641 294 240 85 90 chrX 138412056 138412257 -28238039 - L1M2 LINE L1 -3680 2463 2264 6 1641 228 203 62 0 chrX 138412257 138412321 -28237975 + CT-rich Low_complexity Low_complexity 3 70 0 6 1641 291 368 0 0 chrX 138412329 138412424 -28237872 - PB1D10 SINE Alu -11 106 12 6 1641 214 351 0 0 chrX 138413118 138413175 -28237121 + MIRm SINE MIR 220 276 0 6 1641 402 115 0 0 chrX 138413804 138413865 -28236431 + (TAA)n Simple_repeat Simple_repeat 3 63 0 6 1641 657 38 0 0 chrX 138413999 138414079 -28236217 + (TA)n Simple_repeat Simple_repeat 2 81 0 6 1641 429 20 0 0 chrX 138414079 138414128 -28236168 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1641 275 71 24 0 chrX 138414333 138414375 -28235921 + (CATA)n Simple_repeat Simple_repeat 2 44 0 6 1641 370 282 16 16 chrX 138414493 138414619 -28235677 + Lx7 LINE L1 7562 7687 -9 6 1641 186 43 0 0 chrX 138415344 138415367 -28234929 + (GGAGAA)n Simple_repeat Simple_repeat 1 23 0 6 1641 224 308 7 22 chrX 138415383 138415519 -28234777 + GA-rich Low_complexity Low_complexity 3 136 0 6 1641 547 327 160 18 chrX 138417111 138417612 -28232684 + L1MD LINE L1 4005 4576 -1570 6 1641 310 86 36 24 chrX 138417632 138417715 -28232581 + (CAAAA)n Simple_repeat Simple_repeat 2 85 0 6 1641 3656 271 60 30 chrX 138417719 138417820 -28232476 - Lx7 LINE L1 -859 6837 6739 6 1641 3830 53 0 11 chrX 138417820 138418296 -28232000 - L1Md_F2 LINE L1 -16 6566 6096 6 1641 3656 263 71 28 chrX 138418296 138419643 -28230653 - Lx7 LINE L1 -958 6738 5339 6 1641 971 164 0 6 chrX 138419643 138419821 -28230475 - Lx3A LINE L1 -3 6978 6802 6 1641 2918 251 88 24 chrX 138419821 138420289 -28230007 - Lx7 LINE L1 -542 5338 4844 6 1641 346 164 0 0 chrX 138420606 138420661 -28229635 - B2_Mm2 SINE B2 -94 101 47 6 1641 1188 83 60 0 chrX 138420693 138420861 -28229435 - B2_Mm1t SINE B2 -14 179 2 6 1641 381 290 45 161 chrX 138420915 138421218 -28229078 - L1M3 LINE L1 -2184 3962 3730 6 1641 2664 174 58 56 chrX 138421218 138421789 -28228507 - RMER15 LTR ERVL -3 572 1 6 1641 381 286 68 64 chrX 138421789 138422031 -28228265 - L1M3 LINE L1 -2411 3735 3482 6 1641 207 0 0 0 chrX 138422082 138422105 -28228191 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 1641 204 40 0 0 chrX 138422105 138422129 -28228167 + (TA)n Simple_repeat Simple_repeat 1 25 0 6 1641 885 212 108 0 chrX 138422177 138422389 -28227907 + L1_Mur3 LINE L1 2546 2780 -3100 6 1641 244 366 39 54 chrX 138422861 138422991 -28227305 - MER21B LTR ERV1 -198 665 538 6 1641 571 356 171 23 chrX 138423025 138423376 -28226920 - MER21B LTR ERV1 -396 467 65 6 1641 269 303 0 0 chrX 138423560 138423636 -28226660 + GA-rich Low_complexity Low_complexity 3 78 0 6 1641 1935 97 22 126 chrX 138423833 138424116 -28226180 + ORR1A2 LTR MaLR 1 269 -58 6 1641 1225 34 7 0 chrX 138424116 138424262 -28226034 + B1_Mm SINE Alu 1 147 0 6 1641 1935 97 22 126 chrX 138424262 138424343 -28225953 + ORR1A2 LTR MaLR 270 327 0 6 1641 202 290 241 9 chrX 138425274 138425382 -28224914 + MIR SINE MIR 11 143 -119 6 1641 263 229 97 28 chrX 138425546 138425618 -28224678 + ID4_ SINE ID 6 82 -1 6 1641 24 67 0 0 chrX 138425774 138425819 -28224477 + AT_rich Low_complexity Low_complexity 1 45 0 6 1641 206 319 77 0 chrX 138425926 138426018 -28224278 - MIR SINE MIR -8 260 156 6 1641 511 250 128 36 chrX 138426018 138426213 -28224083 + MER2 DNA MER2_type 5 217 -128 6 1641 225 208 0 0 chrX 138426213 138426266 -28224030 - Lx9 LINE L1 -8 7636 7584 6 1641 471 326 15 8 chrX 138426291 138426424 -28223872 + MER2 DNA MER2_type 204 337 -8 6 1641 329 229 23 46 chrX 138426430 138426517 -28223779 - MIRc SINE MIR -108 160 76 7 1641 295 348 106 0 chrX 138427391 138427532 -28222764 - MIRb SINE MIR -6 262 107 7 1641 360 77 0 0 chrX 138428087 138428139 -28222157 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 1641 414 0 0 0 chrX 138428139 138428185 -28222111 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1641 452 296 84 0 chrX 138428187 138428329 -28221967 - RSINE1 SINE B4 -8 157 4 7 1641 842 231 72 9 chrX 138428665 138428888 -28221408 - MER2 DNA MER2_type -28 317 81 7 1641 381 22 0 0 chrX 138429169 138429215 -28221081 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1641 194 143 20 0 chrX 138429253 138429302 -28220994 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1641 999 194 93 37 chrX 138429412 138429445 -28220851 - URR1A DNA MER1_type 0 226 194 7 1641 1306 106 21 0 chrX 138429445 138429633 -28220663 - B2_Mm2 SINE B2 -3 192 1 7 1641 999 194 93 37 chrX 138429633 138429813 -28220483 - URR1A DNA MER1_type -33 193 1 7 1641 429 375 35 63 chrX 138429902 138430187 -28220109 + ORR1E LTR MaLR 83 359 0 7 1641 229 224 33 66 chrX 138431143 138431234 -28219062 + CT-rich Low_complexity Low_complexity 1 88 0 7 1641 21 0 0 0 chrX 138431381 138431402 -28218894 + AT_rich Low_complexity Low_complexity 1 21 0 7 1641 8681 91 17 11 chrX 138431420 138432681 -28217615 + Lx3A LINE L1 5704 6971 -10 7 1641 245 29 29 0 chrX 138432688 138432722 -28217574 + (GA)n Simple_repeat Simple_repeat 2 36 0 7 1641 691 255 132 66 chrX 138432879 138433152 -28217144 - B4A SINE B4 0 292 2 7 1641 1173 61 0 0 chrX 138436184 138436331 -28213965 + B1_Mm SINE Alu 1 147 0 7 1641 3827 88 41 11 chrX 138436340 138436900 -28213396 + L1_Mus3 LINE L1 6059 6635 -3 7 1641 27 29 0 0 chrX 138436900 138436934 -28213362 + AT_rich Low_complexity Low_complexity 1 34 0 7 1641 203 356 17 0 chrX 138437592 138437651 -28212645 + MER5A DNA MER1_type 130 189 0 7 1641 236 234 59 47 chrX 138437662 138437747 -28212549 + MLT1A1 LTR MaLR 27 112 -296 7 1641 703 311 86 8 chrX 138437892 138438135 -28212161 + MLT1A1 LTR MaLR 147 408 0 7 1641 347 271 0 14 chrX 138438178 138438249 -28212047 + MER2B DNA MER2_type 2 71 -265 7 1641 3496 142 76 5 chrX 138438426 138439322 -28210974 + L1_Mur2 LINE L1 830 1815 -4062 7 1641 365 225 128 0 chrX 138439325 138439441 -28210855 + MLT1B LTR MaLR 257 406 -2 7 1641 207 0 0 0 chrX 138439736 138439759 -28210537 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1641 306 0 0 0 chrX 138440001 138440035 -28210261 + (TAA)n Simple_repeat Simple_repeat 3 36 0 7 1641 21 0 0 0 chrX 138440036 138440057 -28210239 + AT_rich Low_complexity Low_complexity 1 21 0 7 1641 355 317 29 40 chrX 138440613 138440787 -28209509 - L1MB7 LINE L1 -17 6167 5996 7 1641 1550 251 45 40 chrX 138441000 138441233 -28209063 - Lx6 LINE L1 -45 7415 7187 7 1641 495 0 0 0 chrX 138441233 138441288 -28209008 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 7 1641 1550 231 34 34 chrX 138441288 138441568 -28208728 - Lx6 LINE L1 -274 7186 6837 7 1641 464 373 33 43 chrX 138441861 138442166 -28208130 - MER102b DNA MER1_type -36 305 4 7 1641 311 332 22 33 chrX 138442424 138442569 -28207727 - ID_B1 SINE B4 -148 144 3 7 1641 299 368 71 8 chrX 138442590 138442716 -28207580 - B1F1 SINE Alu -9 140 7 7 1641 1152 238 18 166 chrX 138442768 138443207 -28207089 + MTE2a LTR MaLR 1 374 -5 7 1641 288 0 0 0 chrX 138444350 138444382 -28205914 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 7 1641 312 91 0 0 chrX 138444526 138444570 -28205726 + (A)n Simple_repeat Simple_repeat 1 44 0 7 1641 212 309 83 0 chrX 138444957 138445041 -28205255 + MIRc SINE MIR 40 130 -138 7 1641 1138 283 65 11 chrX 138445068 138445626 -28204670 - Lx6 LINE L1 -117 7343 6455 7 1641 516 239 126 48 chrX 138445633 138445800 -28204496 - B3A SINE B2 -16 182 3 7 1641 192 234 0 0 chrX 138445802 138445849 -28204447 + MIR SINE MIR 123 169 -93 7 1641 24 53 0 0 chrX 138446026 138446064 -28204232 + AT_rich Low_complexity Low_complexity 1 38 0 7 1641 1565 42 16 0 chrX 138446277 138446468 -28203828 - B2_Mm2 SINE B2 0 195 2 7 1641 1163 68 0 13 chrX 138446890 138447033 -28203263 + B1_Mus1 SINE Alu 1 142 -6 7 1641 369 58 0 0 chrX 138447033 138447085 -28203211 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 7 1641 212 0 36 0 chrX 138448702 138448730 -28201566 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 7 1641 603 313 47 31 chrX 138449304 138449558 -28200738 + MIR SINE MIR 4 261 -1 7 1641 581 277 128 102 chrX 138449618 138449650 -28200646 - B4A SINE B4 -18 274 243 7 1641 336 48 0 0 chrX 138449650 138449692 -28200604 + (CTA)n Simple_repeat Simple_repeat 1 42 0 7 1641 581 277 128 102 chrX 138449692 138449924 -28200372 - B4A SINE B4 -50 242 5 7 1641 565 337 64 0 chrX 138451380 138451567 -28198729 + MER63A DNA AcHobo 1 199 -11 7 1641 423 38 0 0 chrX 138452332 138452385 -28197911 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1641 300 324 28 9 chrX 138453481 138453587 -28196709 + MIR SINE MIR 33 140 -122 7 1641 215 386 19 19 chrX 138453941 138454044 -28196252 + MIR3 SINE MIR 89 191 -17 7 1641 337 266 205 27 chrX 138454344 138454456 -28195840 - MER20 DNA MER1_type -57 162 31 7 1641 250 261 178 22 chrX 138454548 138454638 -28195658 + MER5A DNA MER1_type 4 107 -82 7 1641 241 303 81 22 chrX 138456039 138456262 -28194034 + Lx7 LINE L1 902 1137 -6591 7 1641 2075 261 46 49 chrX 138456303 138456977 -28193319 + Lx7 LINE L1 6275 6946 -750 7 1641 541 192 301 10 chrX 138457410 138457581 -28192715 - ID_B1 SINE B4 -3 221 1 7 1641 195 42 0 0 chrX 138457584 138457608 -28192688 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 7 1641 1096 302 44 5 chrX 138458210 138458596 -28191700 + Lx7 LINE L1 6914 7314 -382 7 1641 192 152 0 0 chrX 138458759 138458792 -28191504 + CT-rich Low_complexity Low_complexity 5 37 0 7 1641 283 260 36 55 chrX 138459987 138460097 -28190199 - L2a LINE L2 -3 3423 3316 7 1641 572 271 85 25 chrX 138460413 138460731 -28189565 + L5 LINE RTE 1914 2250 -15 7 1641 238 322 68 50 chrX 138462445 138462664 -28187632 + L1M5 LINE L1 5422 5644 -480 7 1641 322 322 78 10 chrX 138462890 138463011 -28187285 - MLT2B4 LTR ERVL -140 416 253 7 1641 1839 177 67 20 chrX 138464217 138464575 -28185721 + ORR1C1 LTR MaLR 1 375 -3 7 1641 436 318 68 40 chrX 138464602 138465074 -28185222 + L1M3c LINE L1 1118 1602 -4539 7 1641 356 356 120 0 chrX 138465107 138465323 -28184973 + L1M4c LINE L1 2024 2265 -4743 7 1641 1792 205 141 32 chrX 138465328 138465379 -28184917 + Lx6 LINE L1 6120 6176 -1284 7 1641 180 0 0 0 chrX 138465379 138465399 -28184897 + (TA)n Simple_repeat Simple_repeat 2 21 0 7 1641 1792 205 141 32 chrX 138465399 138465842 -28184454 + Lx6 LINE L1 6177 6668 -792 7 1641 374 162 12 0 chrX 138465838 138465918 -28184378 + Lx6 LINE L1 7332 7412 -48 7 1641 775 108 16 0 chrX 138465918 138466047 -28184249 + (TA)n Simple_repeat Simple_repeat 1 131 0 7 1641 297 0 0 0 chrX 138466048 138466081 -28184215 + (GA)n Simple_repeat Simple_repeat 2 34 0 7 1641 32665 87 4 9 chrX 138466085 138472267 -28178029 - L1Md_F2 LINE L1 -10 6572 420 7 1641 318 252 101 59 chrX 138472269 138472439 -28177857 + L1M4c LINE L1 2296 2482 -4852 7 1641 1947 285 87 59 chrX 138472748 138473336 -28176960 + L1M4c LINE L1 2977 3552 -3448 7 1641 1092 115 0 0 chrX 138473336 138473484 -28176812 - B1_Mus1 SINE Alu 0 148 1 7 1641 1947 285 87 59 chrX 138473484 138474448 -28175848 + L1M4c LINE L1 3553 4572 -2428 7 1641 378 0 0 0 chrX 138474486 138474528 -28175768 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1641 475 288 94 33 chrX 138474582 138474929 -28175367 + L1M4c LINE L1 4851 5216 -1787 7 1641 636 284 17 66 chrX 138474957 138475198 -28175098 + Lx6 LINE L1 7224 7452 -8 7 1641 589 243 93 34 chrX 138475202 138475470 -28174826 + L1M4c LINE L1 5252 5535 -1465 7 1641 461 278 46 16 chrX 138475460 138475590 -28174706 + L1_Rod LINE L1 2315 2453 -3394 7 1641 414 0 0 0 chrX 138475590 138475636 -28174660 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1641 461 278 46 16 chrX 138475636 138475699 -28174597 + L1_Rod LINE L1 2454 2514 -3333 7 1641 589 250 10 25 chrX 138475738 138475935 -28174361 - L1_Mur3 LINE L1 -3144 2736 2543 7 1641 1702 273 65 40 chrX 138475937 138476566 -28173730 + Lx8 LINE L1 6827 7471 -2 7 1641 2652 290 49 31 chrX 138476577 138478076 -28172220 + Lx8 LINE L1 5259 6814 -659 7 1641 4726 200 73 5 chrX 138478074 138479482 -28170814 + Lx5 LINE L1 5543 7050 0 7 1641 7593 62 2 1 chrX 138479947 138481443 -28168853 - L1Md_F2 LINE L1 -10 6572 5075 7 1641 6832 116 4 12 chrX 138481441 138483227 -28167069 - L1Md_F2 LINE L1 -3683 2200 446 7 1641 675 304 152 33 chrX 138483421 138483751 -28166545 - MLT1A1 LTR MaLR -39 369 1 7 1641 684 297 31 47 chrX 138483846 138484037 -28166259 - B3A SINE B2 -5 193 6 7 1641 410 244 0 0 chrX 138484065 138484155 -28166141 - MLT2B4 LTR ERVL -466 90 1 7 1641 522 293 0 41 chrX 138484177 138484323 -28165973 - B1_Mur1 SINE Alu -7 142 3 7 1641 441 0 0 0 chrX 138486107 138486156 -28164140 + (TA)n Simple_repeat Simple_repeat 1 49 0 7 1641 306 0 0 0 chrX 138487424 138487458 -28162838 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1641 312 27 0 0 chrX 138487459 138487496 -28162800 + (TAG)n Simple_repeat Simple_repeat 3 39 0 7 1641 278 318 9 0 chrX 138487511 138487621 -28162675 + (TA)n Simple_repeat Simple_repeat 1 111 0 7 1641 2355 175 2 33 chrX 138487756 138488176 -28162120 - MTC LTR MaLR 0 421 15 7 1641 929 263 98 23 chrX 138488481 138488788 -28161508 - Lx9 LINE L1 -15 7629 7295 7 1641 1829 64 4 39 chrX 138488788 138489048 -28161248 + L1Md_F2 LINE L1 6320 6570 -12 7 1641 929 263 98 23 chrX 138489048 138489087 -28161209 - Lx9 LINE L1 -350 7294 7257 7 1641 318 26 0 0 chrX 138489226 138489265 -28161031 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1641 656 214 29 18 chrX 138489265 138489436 -28160860 - Lx7 LINE L1 -299 7397 7225 7 1641 197 289 143 10 chrX 138489655 138489753 -28160543 - L2b LINE L2 -14 3361 3251 7 1641 1278 232 18 54 chrX 138489989 138490321 -28159975 - MARNA DNA Mariner -2 584 265 7 1641 286 167 169 34 chrX 138490680 138490798 -28159498 - Lx7 LINE L1 0 7696 7563 7 1641 2536 218 37 10 chrX 138490825 138491414 -28158882 - Lx7 LINE L1 -288 7408 6804 7 1641 1235 114 27 0 chrX 138493113 138493332 -28156964 + L1_Mur2 LINE L1 5241 5465 -412 7 1641 270 0 0 0 chrX 138493961 138493991 -28156305 + (TG)n Simple_repeat Simple_repeat 2 31 0 7 1641 206 163 23 0 chrX 138494266 138494309 -28155987 + T-rich Low_complexity Low_complexity 2 45 0 7 1641 1526 135 35 196 chrX 138494710 138494989 -28155307 + RMER17C LTR ERVK 1 223 -187 7 1641 225 0 0 0 chrX 138494989 138495014 -28155282 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 1641 1526 135 35 196 chrX 138495014 138495223 -28155073 + RMER17C LTR ERVK 224 410 0 7 1641 256 323 82 51 chrX 138496095 138496193 -28154103 - PB1D7 SINE Alu -17 103 3 7 1641 418 261 44 33 chrX 138496363 138496454 -28153842 + B1F1 SINE Alu 1 92 -57 8 1641 207 0 0 0 chrX 138496467 138496490 -28153806 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 8 1641 255 250 11 35 chrX 138497045 138497132 -28153164 + CT-rich Low_complexity Low_complexity 2 86 0 8 1641 4738 63 0 12 chrX 138498104 138498710 -28151586 + L1_Mus1 LINE L1 5969 6567 0 8 1641 1160 227 50 40 chrX 138498715 138499036 -28151260 + ORR1C2 LTR MaLR 24 347 -37 8 1641 291 28 0 0 chrX 138500015 138500051 -28150245 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1641 406 274 157 4 chrX 138500873 138501086 -28149210 - L1MA4 LINE L1 -198 5958 5722 2 1641 284 230 129 10 chrX 138501066 138501167 -28149129 - L1M3 LINE L1 -479 5692 5580 3 1641 744 253 13 7 chrX 138501174 138501329 -28148967 - B3A SINE B2 -42 156 1 4 1641 1242 273 58 16 chrX 138501477 138502403 -28147893 - L1MA5 LINE L1 -305 5995 5029 5 1641 529 325 45 28 chrX 138502469 138502760 -28147536 + Lx8 LINE L1 7178 7473 0 6 1641 346 312 7 28 chrX 138502798 138502943 -28147353 - L1MA5 LINE L1 -1199 4944 4803 5 1641 1271 153 5 19 chrX 138503466 138503679 -28146617 - B3 SINE B2 -6 210 1 7 1641 635 242 197 6 chrX 138503995 138504178 -28146118 - ID_B1 SINE B4 -3 221 4 8 1641 1071 249 108 12 chrX 138504288 138504621 -28145675 - ORR1D1 LTR MaLR -8 366 2 9 1641 306 347 27 20 chrX 138506080 138506227 -28144069 - MIR SINE MIR -114 148 1 1 1641 195 214 49 82 chrX 138506468 138506529 -28143767 - L2a LINE L2 -262 3164 3106 1 1641 828 0 0 0 chrX 138506560 138506652 -28143644 + (CATATA)n Simple_repeat Simple_repeat 4 95 0 1 1641 188 34 0 33 chrX 138507325 138507355 -28142941 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1641 581 180 22 36 chrX 138507356 138507373 -28142923 + ID_B1 SINE B4 80 215 -9 1 1641 998 33 0 0 chrX 138507373 138507494 -28142802 + B1_Mus1 SINE Alu 19 139 -9 1 1641 262 0 53 0 chrX 138507494 138507532 -28142764 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1 1641 301 344 11 9 chrX 138507937 138508092 -28142204 + MIRc SINE MIR 13 165 -97 1 1641 226 292 0 0 chrX 138508195 138508260 -28142036 + (ATG)n Simple_repeat Simple_repeat 2 66 0 1 1641 293 336 111 7 chrX 138508818 138508962 -28141334 + MLT1C LTR MaLR 263 421 -46 1 1641 260 268 12 112 chrX 138509227 138509307 -28140989 + 5S rRNA rRNA 1 72 -49 2 1641 248 82 0 0 chrX 138509681 138509730 -28140566 + Lx LINE L1 6605 6653 -1 2 1641 280 350 33 8 chrX 138509888 138510009 -28140287 + MIRm SINE MIR 25 148 -128 2 1641 665 125 122 24 chrX 138510777 138510900 -28139396 + B1_Mur4 SINE Alu 3 137 -13 2 1641 204 40 0 0 chrX 138510901 138510926 -28139370 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 2 1641 1563 122 0 24 chrX 138511727 138511980 -28138316 + Lx3B LINE L1 6722 6968 -5 2 1641 2755 204 78 16 chrX 138512225 138512913 -28137383 - Lx2B LINE L1 -2 6998 6268 2 1641 432 0 0 0 chrX 138513075 138513123 -28137173 + (TCC)n Simple_repeat Simple_repeat 1 48 0 2 1641 1131 85 0 0 chrX 138513147 138513288 -28137008 - B1_Mm SINE Alu -6 141 1 2 1641 240 293 176 13 chrX 138513453 138513612 -28136684 - L3 LINE CR1 -100 4389 4205 2 1641 390 361 55 98 chrX 138513985 138514443 -28135853 - L2c LINE L2 0 3387 2950 3 1641 756 237 60 42 chrX 138516163 138516379 -28133917 - ID_B1 SINE B4 -2 222 3 3 1641 188 299 92 10 chrX 138516759 138516857 -28133439 - L2c LINE L2 -1295 2124 2019 3 1641 1076 282 38 28 chrX 138517425 138517819 -28132477 + Lx6 LINE L1 7037 7434 -26 3 1641 1181 185 14 5 chrX 138518325 138518548 -28131748 - URR1B DNA MER1_type 0 225 1 3 1641 273 128 0 0 chrX 138520542 138520589 -28129707 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1641 218 264 0 19 chrX 138521829 138521883 -28128413 + GA-rich Low_complexity Low_complexity 3 55 0 3 1641 792 316 29 26 chrX 138522422 138522695 -28127601 + B4A SINE B4 1 274 -18 3 1641 273 29 0 0 chrX 138524417 138524451 -28125845 + (T)n Simple_repeat Simple_repeat 1 34 0 3 1641 441 0 0 0 chrX 138525886 138525935 -28124361 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1641 192 389 60 22 chrX 138527846 138527980 -28122316 + MIR3 SINE MIR 50 188 -20 3 1641 381 43 0 0 chrX 138528168 138528215 -28122081 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1641 279 119 29 15 chrX 138528471 138528539 -28121757 + GA-rich Low_complexity Low_complexity 3 71 0 4 1641 432 82 0 0 chrX 138528526 138528587 -28121709 + (GGAA)n Simple_repeat Simple_repeat 1 61 0 4 1641 282 73 0 0 chrX 138530058 138530099 -28120197 + (TTG)n Simple_repeat Simple_repeat 2 42 0 4 1641 381 162 0 0 chrX 138532733 138532801 -28117495 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 1641 198 309 133 26 chrX 138532822 138532935 -28117361 - L2c LINE L2 -6 3381 3257 4 1641 432 264 186 0 chrX 138533937 138534066 -28116230 + RSINE1 SINE B4 2 154 -11 4 1641 888 104 0 0 chrX 138534066 138534200 -28116096 + (GAAAA)n Simple_repeat Simple_repeat 2 135 0 4 1641 291 297 42 24 chrX 138535211 138535312 -28114984 - MER5B DNA MER1_type 0 178 87 4 1641 1954 170 3 80 chrX 138535673 138536050 -28114246 + ORR1B1 LTR MaLR 47 394 0 4 1641 2422 59 28 0 chrX 138536310 138536631 -28113665 + L1Md_F3 LINE L1 6255 6584 0 5 1641 339 294 30 45 chrX 138536654 138536786 -28113510 + MIR SINE MIR 88 217 -45 5 1641 279 190 0 0 chrX 138536826 138536884 -28113412 + (CACCAT)n Simple_repeat Simple_repeat 2 59 0 5 1641 180 234 42 21 chrX 138536937 138536985 -28113311 - L2 LINE L2 -1376 2043 1995 5 1641 261 0 0 0 chrX 138539181 138539210 -28111086 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1641 993 118 7 0 chrX 138540197 138540350 -28109946 - Lx LINE L1 -341 6313 6160 5 1641 2771 96 59 0 chrX 138540344 138540770 -28109526 + Lx LINE L1 5695 6145 -509 5 1641 791 318 25 21 chrX 138541464 138541789 -28108507 - MamGyp-int LTR Gypsy -4090 972 647 5 205 456 355 51 23 chrX 138543050 138543266 -28107030 - MIR SINE MIR -23 239 18 5 1642 335 253 158 10 chrX 138544406 138544602 -28105694 - L1MC4a LINE L1 -138 7744 7520 5 1642 437 261 0 0 chrX 138544609 138544697 -28105599 - PB1D10 SINE Alu -27 90 3 5 1642 843 229 27 154 chrX 138544697 138545100 -28105196 - L1MC4a LINE L1 -346 7536 7185 5 1642 223 229 0 0 chrX 138546183 138546231 -28104065 - L2b LINE L2 -9 3417 3370 6 1642 366 23 0 0 chrX 138546573 138546616 -28103680 + (TTG)n Simple_repeat Simple_repeat 1 43 0 6 1642 2902 42 18 45 chrX 138546636 138547035 -28103261 + RLTR10 LTR ERVK 1 388 -2 6 1642 264 333 34 64 chrX 138547101 138547367 -28102929 - L2c LINE L2 -206 3181 2924 6 1642 248 303 14 43 chrX 138548624 138548693 -28101603 + MIR SINE MIR 19 85 -123 6 1642 204 403 14 0 chrX 138548701 138548773 -28101523 + L3b LINE CR1 401 473 -9 6 1642 362 362 99 36 chrX 138548867 138549404 -28100892 - L2c LINE L2 -64 3323 2751 6 1642 279 263 19 75 chrX 138550449 138550556 -28099740 - L2b LINE L2 -1 3374 3274 6 1642 300 353 66 34 chrX 138551264 138551584 -28098712 + L1M5 LINE L1 5522 5851 -273 6 1642 255 276 52 13 chrX 138552404 138552481 -28097815 - Charlie4z DNA MER1_type -69 98 19 6 1642 1657 99 122 0 chrX 138553814 138554076 -28096220 - ORR1A4 LTR MaLR -35 294 1 6 1642 710 271 54 18 chrX 138554076 138554298 -28095998 + MER2 DNA MER2_type 93 322 -23 7 1642 406 401 108 22 chrX 138554816 138555132 -28095164 + MLT1J2 LTR MaLR 51 393 -55 7 1642 672 231 28 0 chrX 138555145 138555288 -28095008 + B1_Mur1 SINE Alu 3 149 0 7 1642 22 0 0 0 chrX 138556024 138556046 -28094250 + AT_rich Low_complexity Low_complexity 1 22 0 7 1642 380 247 206 62 chrX 138556064 138556079 -28094217 - B3A SINE B2 -15 183 171 7 1642 180 0 0 0 chrX 138556079 138556099 -28094197 + (CATG)n Simple_repeat Simple_repeat 1 20 0 7 1642 380 247 206 62 chrX 138556099 138556243 -28094053 - B3A SINE B2 -28 170 1 7 1642 408 55 0 0 chrX 138556319 138556374 -28093922 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1642 24919 69 14 3 chrX 138556388 138559883 -28090413 + L1Md_F2 LINE L1 2050 5584 -299 7 1642 7813 62 1 2 chrX 138559885 138560872 -28089424 + L1Md_F2 LINE L1 5587 6572 -10 7 1642 456 321 68 25 chrX 138560874 138561037 -28089259 - B3 SINE B2 -41 175 6 7 1642 290 336 36 32 chrX 138561110 138561387 -28088909 + L1MEf LINE L1 1616 1893 -4307 7 1642 578 303 0 0 chrX 138561738 138561870 -28088426 + B1F SINE Alu 3 134 -15 8 1642 412 295 85 15 chrX 138561958 138562230 -28088066 + L1MC4a LINE L1 7346 7636 -246 8 1642 360 0 0 0 chrX 138562412 138562452 -28087844 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 1642 273 109 164 0 chrX 138564263 138564318 -28085978 - L1MA5 LINE L1 -42 6258 6195 8 1642 333 326 28 21 chrX 138564975 138565116 -28085180 + MER5A DNA MER1_type 10 151 -38 8 1642 336 256 12 25 chrX 138566013 138566093 -28084203 - Zaphod2 DNA Tip100 -3445 79 1 8 1642 612 40 0 0 chrX 138566144 138566219 -28084077 + (CATATA)n Simple_repeat Simple_repeat 1 75 0 8 1642 495 33 0 0 chrX 138567433 138567494 -28082802 + (TG)n Simple_repeat Simple_repeat 1 61 0 8 1642 995 288 25 11 chrX 138567510 138567787 -28082509 - B4A SINE B4 -7 285 5 8 1642 378 325 48 0 chrX 138567790 138567916 -28082380 - B1F1 SINE Alu -17 132 1 8 1642 2331 74 3 6 chrX 138567971 138568283 -28082013 - L1Md_F2 LINE L1 -4 6578 6268 9 1642 207 0 0 0 chrX 138568329 138568352 -28081944 + (TTC)n Simple_repeat Simple_repeat 3 25 0 9 1642 908 169 0 6 chrX 138568352 138568531 -28081765 + CT-rich Low_complexity Low_complexity 3 180 0 9 1642 886 219 28 19 chrX 138568682 138568896 -28081400 + B3 SINE B2 1 216 0 9 1642 32789 77 2 1 chrX 138569324 138572599 -28077697 - L1Md_F2 LINE L1 -344 6238 2959 9 1642 4383 77 43 5 chrX 138572599 138573209 -28077087 + L1Md_F2 LINE L1 5942 6574 -8 9 1642 32789 89 22 1 chrX 138573209 138575728 -28074568 - L1Md_F2 LINE L1 -2925 2958 385 9 1642 404 208 123 19 chrX 138577226 138577388 -28072908 - Lx9 LINE L1 -20 7624 7446 9 1642 458 234 12 20 chrX 138577463 138577575 -28072721 - PB1D10 SINE Alu 0 120 1 9 1642 28 0 0 0 chrX 138578069 138578097 -28072199 + AT_rich Low_complexity Low_complexity 1 28 0 9 1642 4862 59 3 27 chrX 138578261 138578962 -28071334 + L1_Mm LINE L1 4119 4802 -1081 9 1642 34347 51 8 4 chrX 138578963 138584331 -28065965 + L1Md_T LINE L1 238 5586 -297 1 1642 8403 33 0 0 chrX 138584331 138585344 -28064952 + L1Md_T LINE L1 5587 6582 0 1 1642 6042 61 4 0 chrX 138585356 138586161 -28064135 + L1Md_F2 LINE L1 4778 5585 -298 1 1642 8156 31 18 1 chrX 138586162 138587141 -28063155 + L1Md_F2 LINE L1 5587 6582 0 1 1642 414 108 0 0 chrX 138589144 138589209 -28061087 + (TTA)n Simple_repeat Simple_repeat 1 65 0 1 1642 640 234 29 0 chrX 138589267 138589442 -28060854 - L1MA6 LINE L1 -11 6289 6110 1 1642 28 48 0 0 chrX 138590195 138590237 -28060059 + AT_rich Low_complexity Low_complexity 1 42 0 1 1642 535 279 58 11 chrX 138590286 138590460 -28059836 - B3A SINE B2 -16 182 1 1 1642 421 278 101 20 chrX 138590535 138590733 -28059563 - L1MA6 LINE L1 -194 6106 5885 1 1642 902 130 17 6 chrX 138591899 138592077 -28058219 + CT-rich Low_complexity Low_complexity 1 180 0 1 1642 725 299 28 36 chrX 138592542 138592795 -28057501 + MIRc SINE MIR 17 267 -1 1 1642 588 216 132 159 chrX 138593916 138594098 -28056198 - B3A SINE B2 0 198 1 1 1642 496 300 64 7 chrX 138594152 138594293 -28056003 - RSINE1 SINE B4 -16 149 1 1 1642 261 0 0 0 chrX 138597883 138597912 -28052384 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1642 493 316 6 6 chrX 138598082 138598238 -28052058 + L2 LINE L2 2269 2424 -995 1 1642 1182 176 171 63 chrX 138599364 138599698 -28050598 + ORR1D1 LTR MaLR 5 374 0 1 1642 1247 64 58 0 chrX 138600418 138600589 -28049707 + B2_Mm2 SINE B2 1 181 -14 1 1642 1047 130 0 0 chrX 138600592 138600761 -28049535 + (GGAA)n Simple_repeat Simple_repeat 3 171 0 1 1642 3223 53 5 0 chrX 138600784 138601178 -28049118 + MTA_Mm LTR MaLR 1 396 0 1 1642 8906 44 6 1 chrX 138601178 138602270 -28048026 + MTA_Mm-int LTR MaLR 1 1098 0 1 1642 3383 38 2 0 chrX 138602270 138602665 -28047631 + MTA_Mm LTR MaLR 1 396 0 1 1642 408 316 108 0 chrX 138603186 138603344 -28046952 + MIRb SINE MIR 49 223 -45 1 1642 261 311 126 0 chrX 138603606 138603741 -28046555 - MIR SINE MIR 0 262 111 1 1642 254 276 32 57 chrX 138604613 138604736 -28045560 + HAL1 LINE L1 794 913 -1594 1 1642 853 312 29 120 chrX 138604806 138605181 -28045115 + MER2 DNA MER2_type 5 345 0 1 1642 754 285 49 29 chrX 138605381 138605723 -28044573 + L1MA5 LINE L1 5653 6011 -289 1 1642 641 216 16 8 chrX 138605943 138606069 -28044227 - ID_B1 SINE B4 0 224 98 1 1642 339 282 43 51 chrX 138605947 138606085 -28044211 + YREP_Mm Unknown Unknown 181 317 -1495 1 1642 238 269 30 0 chrX 138606401 138606468 -28043828 + ID2 SINE ID 4 72 -11 1 1642 242 296 41 59 chrX 138606566 138606735 -28043561 + HAL1 LINE L1 1620 1785 -722 1 1642 1633 270 33 42 chrX 138607098 138607671 -28042625 + Lx5 LINE L1 6478 7045 -5 1 1642 230 356 21 32 chrX 138607725 138607818 -28042478 + ID_B1 SINE B4 127 218 -6 1 1642 428 251 107 35 chrX 138608003 138608172 -28042124 + B3A SINE B2 2 182 -16 1 1642 377 58 19 0 chrX 138608211 138608263 -28042033 + HAL1-3A_ME LINE L1 1978 2030 -828 1 1642 430 267 11 0 chrX 138608323 138608413 -28041883 - B3 SINE B2 -46 170 80 1 1642 185 328 16 0 chrX 138608526 138608590 -28041706 + L2a LINE L2 3267 3331 -95 1 1642 313 305 194 6 chrX 138608590 138608755 -28041541 - MER63A DNA AcHobo -14 196 1 1 1642 214 275 40 99 chrX 138608757 138608858 -28041438 + L2a LINE L2 3327 3421 -5 1 1642 1994 130 11 0 chrX 138608901 138609263 -28041033 + L1_Mur1 LINE L1 3138 3503 -2383 1 1642 2840 149 0 0 chrX 138609259 138609756 -28040540 + L1_Mm LINE L1 4641 5137 -746 1 1642 748 184 14 16 chrX 138609756 138609927 -28040369 + RMER17C LTR ERVK 1 143 -267 1 1642 351 113 32 16 chrX 138609927 138609990 -28040306 + RMER17C-int LTR ERVK 121 184 -3054 1 1642 2020 101 54 54 chrX 138610018 138610428 -28039868 - RMER17C LTR ERVK 0 410 1 1 1642 1171 148 19 5 chrX 138610428 138610639 -28039657 + L1_Mur1 LINE L1 5136 5349 -537 1 1642 2854 148 51 2 chrX 138610639 138611146 -28039150 + Lx3C LINE L1 6443 6974 -2 1 1642 362 205 12 0 chrX 138611307 138611406 -28038890 - L1MA5 LINE L1 -474 5826 5710 1 1642 370 292 61 15 chrX 138611732 138611864 -28038432 - MIRb SINE MIR -34 234 97 1 1642 189 382 15 0 chrX 138612121 138612189 -28038107 - MIRb SINE MIR -193 75 7 1 1642 315 0 0 0 chrX 138612441 138612476 -28037820 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 1642 411 56 0 0 chrX 138612602 138612656 -28037640 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1642 324 0 0 0 chrX 138612866 138612902 -28037394 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1642 545 352 43 71 chrX 138613205 138613529 -28036767 + MLT1L LTR MaLR 152 466 -144 1 1642 196 170 19 19 chrX 138613830 138613884 -28036412 + GA-rich Low_complexity Low_complexity 4 57 0 1 1642 369 0 0 0 chrX 138614042 138614083 -28036213 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1642 556 218 38 0 chrX 138614084 138614217 -28036079 - Lx9 LINE L1 -188 7456 7319 1 1642 286 219 14 0 chrX 138614358 138614431 -28035865 + L1_Rod LINE L1 5129 5202 -645 1 1642 202 371 0 0 chrX 138615135 138615205 -28035091 + MIR SINE MIR 52 121 -141 1 1642 236 314 29 10 chrX 138615697 138615800 -28034496 + MIRb SINE MIR 111 215 -53 1 1642 230 312 73 119 chrX 138616045 138616263 -28034033 + MARNA DNA Mariner 33 240 -346 1 1642 425 286 77 21 chrX 138616669 138616812 -28033484 + LTR16A LTR ERVL 13 163 -288 1 1642 474 337 40 30 chrX 138616812 138617014 -28033282 + MER63A DNA AcHobo 2 205 -5 1 1642 243 348 33 0 chrX 138617153 138617245 -28033051 + LTR16A LTR ERVL 322 416 -35 1 1642 194 350 17 0 chrX 138617332 138617392 -28032904 + L2c LINE L2 3274 3334 -53 1 1642 354 23 0 0 chrX 138617405 138617448 -28032848 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1642 206 311 16 32 chrX 138617728 138617791 -28032505 - L3b LINE CR1 -13 469 408 1 1642 283 250 29 188 chrX 138618482 138618620 -28031676 + PB1D10 SINE Alu 2 117 0 1 1642 1385 98 0 5 chrX 138619012 138619207 -28031089 + B2_Mm2 SINE B2 1 194 -1 1 1642 774 256 40 0 chrX 138619323 138619499 -28030797 + MER5A DNA MER1_type 6 188 -1 1 1642 557 287 94 29 chrX 138619502 138619713 -28030583 + MIR SINE MIR 45 259 -3 1 1642 245 262 0 0 chrX 138620473 138620534 -28029762 + MIRc SINE MIR 195 255 -13 1 1642 1186 67 11 58 chrX 138621608 138621799 -28028497 + L1_Mus3 LINE L1 6457 6638 0 1 1642 26 30 0 0 chrX 138621821 138621854 -28028442 + AT_rich Low_complexity Low_complexity 1 33 0 1 1642 1305 90 0 4 chrX 138622179 138622424 -28027872 + (GAAA)n Simple_repeat Simple_repeat 1 243 0 1 1642 216 331 87 73 chrX 138622489 138622639 -28027657 - B4A SINE B4 -76 216 65 1 1642 379 0 39 0 chrX 138623277 138623328 -28026968 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 1 1642 244 288 20 92 chrX 138624591 138624786 -28025510 + L2 LINE L2 2475 2655 -764 1 1642 231 266 31 0 chrX 138625114 138625178 -28025118 + GA-rich Low_complexity Low_complexity 6 71 0 1 1642 603 0 0 0 chrX 138625209 138625276 -28025020 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 1 1642 546 195 16 48 chrX 138625397 138625521 -28024775 + PB1D9 SINE Alu 1 120 0 1 1642 582 289 30 44 chrX 138625621 138625824 -28024472 + RMER30 DNA MER1_type 2 201 -1 1 1642 750 169 103 30 chrX 138625895 138626085 -28024211 + B3 SINE B2 1 195 0 1 1642 303 325 25 0 chrX 138627016 138627096 -28023200 + PB1D7 SINE Alu 23 104 -16 1 1642 21 0 0 0 chrX 138627265 138627286 -28023010 + AT_rich Low_complexity Low_complexity 1 21 0 1 1642 189 0 0 0 chrX 138627616 138627637 -28022659 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1 1642 432 270 111 99 chrX 138628012 138628345 -28021951 + MLT1A1 LTR MaLR 72 408 0 1 1642 258 281 56 11 chrX 138628430 138628520 -28021776 - MIRb SINE MIR 0 268 175 1 1642 186 179 145 29 chrX 138628988 138629057 -28021239 + MIR SINE MIR 79 155 -107 1 1642 223 309 12 36 chrX 138629162 138629246 -28021050 + MIR SINE MIR 33 114 -94 1 1642 336 172 0 0 chrX 138629621 138629679 -28020617 + L2a LINE L2 3360 3417 -9 1 1642 296 150 0 32 chrX 138631113 138631175 -28019121 + CT-rich Low_complexity Low_complexity 4 63 0 1 1642 1027 301 11 11 chrX 138632144 138632524 -28017772 - L1MB7 LINE L1 -10 6174 5795 1 1642 888 289 70 22 chrX 138632918 138633190 -28017106 - B4A SINE B4 -4 288 4 1 1642 880 135 8 8 chrX 138633224 138633358 -28016938 + B1_Mur4 SINE Alu 5 138 -12 1 1642 207 0 0 0 chrX 138633360 138633383 -28016913 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1 1642 287 298 10 60 chrX 138633478 138633578 -28016718 - RSINE1 SINE B4 -69 96 2 1 1642 1141 201 16 0 chrX 138634056 138634245 -28016051 - B3 SINE B2 -10 206 15 1 1642 24 0 0 0 chrX 138634349 138634373 -28015923 + AT_rich Low_complexity Low_complexity 1 24 0 1 1642 615 109 22 0 chrX 138634392 138634484 -28015812 + B1_Mus1 SINE Alu 35 128 -20 1 1642 323 245 68 10 chrX 138634484 138634495 -28015801 + ID_B1 SINE B4 115 223 -1 1 1642 216 0 0 0 chrX 138634499 138634523 -28015773 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 1642 504 0 0 0 chrX 138634523 138634578 -28015718 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 1642 402 369 10 14 chrX 138634635 138634844 -28015452 - MIR SINE MIR -52 210 3 1 1642 308 319 11 0 chrX 138635211 138635302 -28014994 - PB1D7 SINE Alu -7 113 22 1 1642 360 324 39 0 chrX 138635304 138635406 -28014890 - B1_Mur3 SINE Alu -40 109 4 1 1642 248 218 0 18 chrX 138635733 138635789 -28014507 + B3A SINE B2 1 55 -143 1 1642 385 347 45 42 chrX 138635852 138635909 -28014387 - ORSL-2b DNA Tip100 -204 304 246 1 1642 2376 224 49 97 chrX 138635909 138636807 -28013489 + RLTR13A LTR ERVK 1 855 0 1 1642 385 347 45 42 chrX 138636807 138637035 -28013261 - ORSL-2b DNA Tip100 -263 245 19 1 1642 237 305 52 36 chrX 138637073 138637267 -28013029 - L1M5 LINE L1 -296 5828 5632 1 1642 32381 72 5 2 chrX 138637324 138642601 -28007695 - L1Md_F2 LINE L1 -1 6581 1288 1 1642 4763 87 1 6 chrX 138642601 138643250 -28007046 - L1Md_F2 LINE L1 -12 6570 5925 1 1642 180 333 40 10 chrX 138643630 138643730 -28006566 + L3 LINE CR1 1254 1356 -3133 2 1642 385 315 71 36 chrX 138643734 138643958 -28006338 + L1MEg LINE L1 774 1005 -5237 2 1642 3494 96 17 14 chrX 138644034 138644554 -28005742 - Lx2 LINE L1 -2 6995 6474 2 1642 332 276 141 43 chrX 138644571 138644897 -28005399 + L1M2 LINE L1 4093 4450 -1693 2 1642 427 314 74 51 chrX 138644900 138645115 -28005181 + B4A SINE B4 24 243 -49 2 1642 1904 164 16 88 chrX 138646728 138647241 -28003055 + L1_Mur3 LINE L1 1408 1883 -3997 2 1642 5358 120 36 21 chrX 138647241 138648217 -28002079 - MYSERV6-int LTR ERVK -5584 3375 2386 2 1642 905 60 0 0 chrX 138648217 138648333 -28001963 + MTB_Mm LTR MaLR 1 116 -291 2 1642 6873 68 8 39 chrX 138648333 138649402 -28000894 - L1_Mus2 LINE L1 -11 6555 5513 2 1642 1412 180 65 143 chrX 138649401 138649875 -28000421 + Lx7 LINE L1 7260 7696 0 2 1642 553 312 102 27 chrX 138649956 138650672 -27999624 + L1MEg LINE L1 2559 3334 -2812 2 1642 583 225 0 169 chrX 138650677 138650843 -27999453 + RSINE1 SINE B4 13 150 -15 2 1642 270 136 0 0 chrX 138650843 138650887 -27999409 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1642 324 0 0 0 chrX 138650887 138650923 -27999373 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1642 26 82 0 0 chrX 138650930 138650991 -27999305 + AT_rich Low_complexity Low_complexity 1 61 0 2 1642 514 292 56 49 chrX 138651395 138651557 -27998739 + RSINE1 SINE B4 3 165 0 2 1642 250 299 39 8 chrX 138651612 138651740 -27998556 + L1MEg LINE L1 3449 3580 -2560 2 1642 292 223 88 18 chrX 138651957 138652071 -27998225 + L1M4 LINE L1 5695 5816 -358 2 1642 419 323 32 0 chrX 138652171 138652329 -27997967 + Lx8 LINE L1 6224 6386 -1087 2 1642 301 305 35 58 chrX 138652457 138652481 -27997815 + B4A SINE B4 68 135 -157 2 1642 362 266 0 0 chrX 138652481 138652545 -27997751 + B1F1 SINE Alu 3 66 -83 2 1642 367 299 74 32 chrX 138652591 138652781 -27997515 + L1MD LINE L1 5012 5209 -937 2 1642 208 26 103 0 chrX 138653010 138653049 -27997247 + (CAAAA)n Simple_repeat Simple_repeat 5 47 0 2 1642 795 162 35 7 chrX 138653069 138653212 -27997084 + B1_Mur3 SINE Alu 2 148 -1 2 1642 312 183 24 32 chrX 138653226 138653350 -27996946 + (TTA)n Simple_repeat Simple_repeat 2 124 0 2 1642 327 244 121 98 chrX 138653509 138653641 -27996655 - MER47B DNA MER2_type -166 252 118 2 1642 523 258 44 22 chrX 138653717 138653852 -27996444 + B1F1 SINE Alu 6 143 -6 2 1642 312 91 0 0 chrX 138654091 138654135 -27996161 + (TCTCCC)n Simple_repeat Simple_repeat 6 49 0 2 1642 665 134 160 0 chrX 138654243 138654362 -27995934 - B1F2 SINE Alu -8 141 4 2 1642 307 328 158 16 chrX 138654395 138654578 -27995718 + L1ME3 LINE L1 5322 5530 -634 2 1642 852 189 7 13 chrX 138654589 138654739 -27995557 + B1_Mur3 SINE Alu 1 149 0 2 1642 230 324 56 0 chrX 138654873 138654981 -27995315 + L1ME3 LINE L1 5681 5794 -368 2 1642 296 350 89 0 chrX 138655306 138655543 -27994753 + L1ME3 LINE L1 5880 6137 -25 2 1642 742 235 90 34 chrX 138655545 138655914 -27994382 + MT2A LTR ERVL 1 463 -138 2 1642 242 132 0 128 chrX 138655920 138655998 -27994298 - Lx9 LINE L1 -68 7576 7509 2 1642 275 352 0 0 chrX 138656096 138656167 -27994129 + ID4_ SINE ID 10 80 -3 2 1642 405 261 200 0 chrX 138657151 138657396 -27992900 - L1MA8 LINE L1 -181 6110 5817 2 1642 550 214 0 0 chrX 138657435 138657538 -27992758 + ORR1C2 LTR MaLR 1 103 -281 2 1642 465 287 85 2 chrX 138657538 138657801 -27992495 + L1MB5 LINE L1 5859 6159 -19 2 1642 201 244 0 0 chrX 138658043 138658084 -27992212 + (CACG)n Simple_repeat Simple_repeat 2 42 0 2 1642 531 0 0 0 chrX 138658084 138658143 -27992153 + (CCA)n Simple_repeat Simple_repeat 1 59 0 2 1642 598 304 14 7 chrX 138658385 138658531 -27991765 - RSINE1 SINE B4 -17 148 2 2 1642 374 382 0 0 chrX 138658531 138658662 -27991634 - MIR SINE MIR -86 176 46 2 1642 654 13 0 0 chrX 138659297 138659372 -27990924 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 2 1642 1432 197 50 14 chrX 138659375 138659658 -27990638 - RMER19B LTR ERVK -608 294 2 2 1642 28 61 0 0 chrX 138659658 138659707 -27990589 + AT_rich Low_complexity Low_complexity 1 49 0 2 1642 517 281 86 17 chrX 138659752 138659926 -27990370 - B3A SINE B2 -11 187 2 2 1642 207 0 0 0 chrX 138660026 138660049 -27990247 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 2 1642 653 139 248 0 chrX 138660049 138660178 -27990118 - B2_Mm2 SINE B2 -34 161 1 2 1642 198 236 18 0 chrX 138660187 138660242 -27990054 + MIR SINE MIR 136 191 -71 2 1642 205 320 20 10 chrX 138660444 138660542 -27989754 + GA-rich Low_complexity Low_complexity 4 102 0 2 1642 248 316 13 0 chrX 138660674 138660753 -27989543 + L2b LINE L2 3295 3374 -1 2 1642 1150 68 0 0 chrX 138661067 138661214 -27989082 + B1_Mus2 SINE Alu 1 147 0 2 1642 270 0 0 0 chrX 138661248 138661278 -27989018 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1642 573 12 163 0 chrX 138661568 138661654 -27988642 + L1Md_F3 LINE L1 6471 6570 -14 2 1642 1178 47 0 13 chrX 138661683 138661833 -27988463 + B1_Mus1 SINE Alu 1 148 0 2 1642 229 64 42 21 chrX 138661837 138661885 -27988411 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 2 1642 711 88 22 14 chrX 138662992 138663131 -27987165 + (GGGGA)n Simple_repeat Simple_repeat 3 142 0 2 1642 734 0 12 0 chrX 138663313 138663399 -27986897 + (TAGA)n Simple_repeat Simple_repeat 2 88 0 2 1642 195 125 0 0 chrX 138663633 138663673 -27986623 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2 1642 22 0 0 0 chrX 138664182 138664204 -27986092 + AT_rich Low_complexity Low_complexity 1 22 0 2 1642 236 208 10 77 chrX 138664287 138664391 -27985905 + T-rich Low_complexity Low_complexity 4 100 0 2 1642 30 45 0 0 chrX 138664460 138664504 -27985792 + AT_rich Low_complexity Low_complexity 1 44 0 2 1642 360 263 13 0 chrX 138664648 138664724 -27985572 - ID4_ SINE ID -5 78 2 2 1642 686 148 28 0 chrX 138665037 138665145 -27985151 - B3 SINE B2 -105 111 1 2 1642 593 240 72 0 chrX 138665397 138665522 -27984774 + B1_Mur2 SINE Alu 10 143 -6 2 1642 1391 6 0 22 chrX 138665526 138665706 -27984590 + (TAGA)n Simple_repeat Simple_repeat 1 176 0 2 1642 21 0 0 0 chrX 138666029 138666050 -27984246 + AT_rich Low_complexity Low_complexity 1 21 0 2 1642 6860 72 32 1 chrX 138666472 138667833 -27982463 - L1_Mus2 LINE L1 0 6566 5162 2 1642 16133 126 15 54 chrX 138667840 138671252 -27979044 - L1_Mus2 LINE L1 -2191 3692 431 2 1642 22 0 0 0 chrX 138672056 138672078 -27978218 + AT_rich Low_complexity Low_complexity 1 22 0 2 1642 28 29 0 0 chrX 138673820 138673855 -27976441 + AT_rich Low_complexity Low_complexity 1 35 0 2 1643 8789 108 28 6 chrX 138674326 138674436 -27975860 - Lx2 LINE L1 -2 6995 6885 2 1643 204 40 0 0 chrX 138674436 138674461 -27975835 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 2 1643 11921 123 31 4 chrX 138674461 138676550 -27973746 - Lx2 LINE L1 -113 6884 4736 2 1643 330 26 0 0 chrX 138676550 138676589 -27973707 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 1643 11921 146 36 2 chrX 138676589 138677652 -27972644 - Lx2 LINE L1 -1148 4735 3628 2 1643 1195 208 196 6 chrX 138677983 138678336 -27971960 - Lx2B LINE L1 -11 6989 6570 2 1643 1243 151 0 0 chrX 138678338 138678543 -27971753 + Lx3C LINE L1 6401 6605 -371 2 1643 261 83 0 0 chrX 138678563 138678599 -27971697 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 2 1643 616 190 0 8 chrX 138678602 138678724 -27971572 - B2_Mm2 SINE B2 -39 156 36 2 1643 383 291 161 80 chrX 138678811 138678976 -27971320 - RLTR40 LTR ERVK -247 570 402 2 1643 333 0 0 0 chrX 138678976 138679013 -27971283 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1643 383 291 161 80 chrX 138679013 138679262 -27971034 - RLTR40 LTR ERVK -416 401 123 2 1643 696 264 22 22 chrX 138679399 138679581 -27970715 + B3 SINE B2 27 208 -8 2 1643 367 315 26 61 chrX 138679603 138679718 -27970578 + PB1D10 SINE Alu 1 111 -6 2 1643 306 304 54 20 chrX 138679782 138679930 -27970366 + MER104 DNA Tc2 15 167 -14 2 1643 886 168 93 10 chrX 138679973 138680166 -27970130 + B3 SINE B2 1 209 -7 2 1643 1600 257 55 10 chrX 138680255 138680656 -27969640 + MTD LTR MaLR 1 419 0 2 1643 738 256 72 24 chrX 138680844 138681052 -27969244 + B4A SINE B4 1 218 -74 2 1643 262 319 93 9 chrX 138681054 138681269 -27969027 + Lx8 LINE L1 7221 7453 -20 2 1643 832 259 19 5 chrX 138681312 138681525 -27968771 + B3 SINE B2 1 216 0 2 1643 273 29 0 0 chrX 138681650 138681684 -27968612 + (GA)n Simple_repeat Simple_repeat 2 35 0 2 1643 766 226 131 5 chrX 138681974 138682165 -27968131 + B3 SINE B2 2 216 0 2 1643 3718 82 0 0 chrX 138682177 138682663 -27967633 + L1_Mus1 LINE L1 6082 6567 0 2 1643 1043 254 83 4 chrX 138683035 138683312 -27966984 - ORR1D2 LTR MaLR 0 370 72 2 1643 211 209 0 0 chrX 138683370 138683413 -27966883 + T-rich Low_complexity Low_complexity 3 45 0 2 1643 1489 212 90 23 chrX 138683429 138683772 -27966524 + ORR1D1 LTR MaLR 1 366 -8 2 1643 5650 187 61 11 chrX 138683832 138684963 -27965333 + ORR1D1-int LTR MaLR 50 1236 -134 2 1643 272 374 37 89 chrX 138684990 138685150 -27965146 - B4A SINE B4 -36 256 100 2 1643 267 31 0 0 chrX 138685150 138685182 -27965114 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1643 272 374 37 89 chrX 138685182 138685291 -27965005 - B4A SINE B4 -193 99 1 2 1643 522 0 0 0 chrX 138685309 138685367 -27964929 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1643 1495 163 169 23 chrX 138685367 138685675 -27964621 + ORR1B2 LTR MaLR 10 362 -5 2 1643 2083 195 10 10 chrX 138685678 138686061 -27964235 + MTD LTR MaLR 37 419 0 2 1643 736 239 117 0 chrX 138686125 138686313 -27963983 + B3 SINE B2 1 210 -6 2 1643 23 0 0 0 chrX 138686582 138686605 -27963691 + AT_rich Low_complexity Low_complexity 1 23 0 2 1643 487 144 206 0 chrX 138686608 138686717 -27963579 - Lx9 LINE L1 -20 7624 7511 2 1643 243 88 0 0 chrX 138686717 138686751 -27963545 + (TAGA)n Simple_repeat Simple_repeat 2 35 0 2 1643 487 144 206 0 chrX 138686751 138686787 -27963509 - Lx9 LINE L1 -134 7510 7450 2 1643 535 198 99 0 chrX 138686785 138686906 -27963390 + Lx9 LINE L1 7067 7199 -445 2 1643 1448 42 26 0 chrX 138686926 138687115 -27963181 + L1Md_F3 LINE L1 6391 6584 0 3 1643 473 210 0 173 chrX 138687195 138687345 -27962951 - B1_Mur2 SINE Alu 0 149 26 3 1643 536 240 231 12 chrX 138687348 138687521 -27962775 - B3 SINE B2 -5 211 1 3 1643 2009 64 82 57 chrX 138687540 138687906 -27962390 + MusHAL1 LINE L1 1706 2080 -632 3 1643 877 43 0 0 chrX 138688234 138688351 -27961945 - L1_Mus1 LINE L1 0 6567 6451 3 1643 23 0 0 0 chrX 138688594 138688617 -27961679 + AT_rich Low_complexity Low_complexity 1 23 0 3 1643 608 245 14 0 chrX 138688667 138688810 -27961486 + L2a LINE L2 3282 3426 0 3 1643 1270 172 14 9 chrX 138688932 138689155 -27961141 + URR1B DNA MER1_type 2 225 0 3 1643 1998 202 29 12 chrX 138689296 138689717 -27960579 + RMER10A LTR ERVL 1 428 -14 3 1643 209 197 16 0 chrX 138689761 138689822 -27960474 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 3 1643 733 208 30 17 chrX 138690165 138690395 -27959901 + L1Md_F LINE L1 570 802 -5717 3 1643 1207 275 93 16 chrX 138691007 138691450 -27958846 - MER82 DNA MER2_type -176 477 1 3 1643 358 304 50 36 chrX 138691451 138691591 -27958705 + L2a LINE L2 2657 2798 -621 3 1643 541 252 15 30 chrX 138691641 138691772 -27958524 - RSINE1 SINE B4 -35 130 2 3 1643 918 316 104 72 chrX 138691897 138692384 -27957912 - MLT2B2 LTR ERVL -15 541 1 3 1643 283 380 0 49 chrX 138692390 138692534 -27957762 + L2a LINE L2 2915 3051 -375 3 1643 510 17 0 0 chrX 138692748 138692807 -27957489 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 1643 24 0 0 0 chrX 138692837 138692861 -27957435 + AT_rich Low_complexity Low_complexity 1 24 0 3 1643 590 234 29 7 chrX 138694330 138694468 -27955828 - B1_Mus1 SINE Alu -6 142 2 3 1643 34464 66 6 8 chrX 138694563 138700766 -27949530 - L1Md_F3 LINE L1 -2 6582 400 3 1643 1136 240 0 0 chrX 138700920 138701116 -27949180 + B3 SINE B2 1 196 -20 3 1643 430 321 106 20 chrX 138701488 138701733 -27948563 - MER20B DNA MER1_type -370 413 148 3 1643 916 267 93 67 chrX 138701859 138702290 -27948006 + RMER15 LTR ERVL 1 531 -44 3 1643 414 0 0 0 chrX 138702290 138702336 -27947960 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1643 916 269 91 23 chrX 138702336 138702373 -27947923 + RMER15 LTR ERVL 532 574 -1 3 1643 244 312 108 0 chrX 138702700 138702793 -27947503 + MIRb SINE MIR 1 110 -158 3 1643 207 69 0 0 chrX 138702837 138702866 -27947430 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1643 247 312 108 0 chrX 138703587 138703680 -27946616 + MIRb SINE MIR 1 110 -158 3 1643 180 111 0 0 chrX 138703682 138703709 -27946587 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1643 351 0 0 0 chrX 138703725 138703764 -27946532 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1643 700 76 50 25 chrX 138703904 138704025 -27946271 - Lx2B LINE L1 -13 6987 6864 3 1643 550 327 71 73 chrX 138704263 138704797 -27945499 + MamGyp-int LTR Gypsy 4451 4983 -79 3 1643 615 273 20 7 chrX 138706314 138706465 -27943831 + MER5A DNA MER1_type 13 165 -24 3 1643 254 308 57 50 chrX 138706345 138706485 -27943811 - MER5B DNA MER1_type -32 146 6 3 1643 235 395 29 6 chrX 138707398 138707571 -27942725 - Lx8 LINE L1 -267 7206 7030 3 1643 408 40 0 0 chrX 138707584 138707634 -27942662 + (TC)n Simple_repeat Simple_repeat 2 51 0 3 1643 771 304 50 25 chrX 138707778 138708099 -27942197 + Lx8 LINE L1 7105 7433 -40 3 1643 236 324 14 0 chrX 138708210 138708284 -27942012 + (CACG)n Simple_repeat Simple_repeat 2 76 0 3 1643 235 86 0 0 chrX 138708305 138708340 -27941956 - MusHAL1 LINE L1 -569 2143 2109 3 1643 628 278 90 27 chrX 138708803 138709136 -27941160 + L1MA7 LINE L1 5851 6204 -87 3 1643 351 0 0 0 chrX 138709148 138709187 -27941109 + (TTA)n Simple_repeat Simple_repeat 3 41 0 3 1643 599 233 108 0 chrX 138709188 138709317 -27940979 - B1_Mur3 SINE Alu -6 143 1 3 1643 256 352 19 65 chrX 138709441 138709596 -27940700 + MT2B2 LTR ERVL 116 263 -321 3 1643 548 220 37 10 chrX 138709500 138709628 -27940668 + B1F SINE Alu 12 150 0 3 1643 531 332 40 73 chrX 138709976 138710278 -27940018 + B4A SINE B4 1 292 0 3 1643 464 48 16 0 chrX 138710285 138710348 -27939948 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 1643 600 268 55 10 chrX 138710535 138710735 -27939561 + B3 SINE B2 1 209 -7 3 1643 278 297 97 52 chrX 138711904 138712116 -27938180 + MIRc SINE MIR 17 253 -15 3 1643 7580 67 1 1 chrX 138713119 138714685 -27935611 - L1_Mus1 LINE L1 0 6654 5010 3 1643 780 301 47 34 chrX 138714745 138715088 -27935208 + L1MC3 LINE L1 7376 7724 -61 3 1643 1064 216 29 0 chrX 138715088 138715296 -27935000 - B3 SINE B2 -2 214 1 3 1643 780 301 47 34 chrX 138715296 138715337 -27934959 + L1MC3 LINE L1 7725 7765 -20 3 1643 250 276 40 0 chrX 138715415 138715491 -27934805 + ID4_ SINE ID 2 80 -3 3 1643 458 368 100 58 chrX 138716850 138717179 -27933117 - MER2 DNA MER2_type -2 343 1 3 1643 447 267 142 24 chrX 138717848 138718017 -27932279 - ORR1E LTR MaLR -168 191 3 3 1643 207 338 118 22 chrX 138718312 138718448 -27931848 + MIR SINE MIR 2 150 -112 3 1643 351 0 0 0 chrX 138718673 138718712 -27931584 + (TC)n Simple_repeat Simple_repeat 1 39 0 3 1643 321 135 0 0 chrX 138718901 138718953 -27931343 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1643 227 321 36 27 chrX 138719120 138719232 -27931064 + L2 LINE L2 2646 2758 -661 3 1643 183 346 62 53 chrX 138719222 138719335 -27930961 - MER5A DNA MER1_type -67 122 9 3 1643 346 324 136 17 chrX 138719487 138719663 -27930633 + MIRb SINE MIR 21 217 -51 3 1643 330 300 136 0 chrX 138719827 138719937 -27930359 + PB1 SINE Alu 1 125 -2 3 1643 238 291 139 0 chrX 138719950 138720036 -27930260 - MER2 DNA MER2_type -223 122 25 3 1643 678 200 43 0 chrX 138720088 138720228 -27930068 + B1_Mur2 SINE Alu 2 147 -2 3 1643 396 0 0 0 chrX 138720262 138720306 -27929990 + (TAA)n Simple_repeat Simple_repeat 2 45 0 3 1643 285 330 35 25 chrX 138720529 138720728 -27929568 - L2 LINE L2 -1880 1539 1339 3 1643 302 285 96 45 chrX 138721025 138721359 -27928937 + L1ME1 LINE L1 5666 6021 -157 3 1643 245 357 123 12 chrX 138721661 138721831 -27928465 - L2b LINE L2 -235 3140 2952 3 1643 332 290 119 18 chrX 138721956 138722065 -27928231 - PB1 SINE Alu -2 125 6 3 1643 851 317 140 31 chrX 138722110 138722505 -27927791 - Lx8 LINE L1 -2 7471 7010 3 1643 650 113 0 53 chrX 138722500 138722631 -27927665 - Lx9 LINE L1 -5 7639 7516 3 1643 595 330 29 29 chrX 138722598 138722841 -27927455 - Lx8 LINE L1 -431 7042 6800 3 1643 1181 271 75 139 chrX 138722845 138722979 -27927317 - Tigger7 DNA MER2_type -1914 577 444 3 1643 1962 111 11 14 chrX 138722979 138723262 -27927034 - L1Md_F2 LINE L1 -1 6581 6300 3 1643 1181 271 75 139 chrX 138723262 138723731 -27926565 - Tigger7 DNA MER2_type -2048 443 14 3 1643 193 347 57 23 chrX 138723902 138724079 -27926217 - L2b LINE L2 -678 2741 2559 3 1643 453 358 63 35 chrX 138724165 138724512 -27925784 - MER90a LTR ERV1 -257 357 1 3 1643 31 34 0 33 chrX 138724538 138724556 -27925740 + AT_rich Low_complexity Low_complexity 1 17 0 3 1643 1459 79 0 6 chrX 138724556 138724734 -27925562 + B2_Mm2 SINE B2 1 177 -18 3 1643 31 34 0 33 chrX 138724734 138724775 -27925521 + AT_rich Low_complexity Low_complexity 1 41 0 3 1643 201 333 91 23 chrX 138724776 138724908 -27925388 - L2b LINE L2 -965 2454 2314 3 1643 24 0 0 0 chrX 138725175 138725199 -27925097 + AT_rich Low_complexity Low_complexity 1 24 0 3 1643 183 266 11 102 chrX 138725239 138725327 -27924969 - L2b LINE L2 -1514 1905 1826 3 1643 335 321 96 88 chrX 138725475 138725714 -27924582 - MIRb SINE MIR -3 265 25 3 1643 595 202 151 0 chrX 138725995 138726114 -27924182 - B1_Mm SINE Alu -8 139 3 3 1643 359 358 13 0 chrX 138726149 138726300 -27923996 - Lx5 LINE L1 -23 7027 6875 3 1643 32793 107 14 5 chrX 138726284 138732047 -27918249 + L1_Mus1 LINE L1 206 6011 -556 3 1643 312 369 0 0 chrX 138732715 138732883 -27917413 + (TGG)n Simple_repeat Simple_repeat 1 168 0 3 1643 4477 70 18 18 chrX 138733789 138734359 -27915937 + L1_Mus1 LINE L1 5998 6567 0 3 1643 2869 252 105 47 chrX 138734415 138735468 -27914828 - Lx6 LINE L1 -179 7281 5911 3 1643 345 282 35 0 chrX 138738595 138738680 -27911616 + B1F SINE Alu 52 139 -10 3 1643 474 191 2 21 chrX 138739030 138739122 -27911174 - PB1 SINE Alu -20 107 15 3 1643 209 256 0 60 chrX 138740839 138740922 -27909374 + G-rich Low_complexity Low_complexity 1 78 0 3 1643 939 216 76 15 chrX 138742054 138742251 -27908045 - B3 SINE B2 -5 211 3 3 1643 702 246 7 7 chrX 138742725 138742868 -27907428 + B1_Mur1 SINE Alu 2 144 -5 3 1643 374 326 132 16 chrX 138742967 138743353 -27906943 + L2 LINE L2 1974 2404 -1015 3 1643 264 164 4 38 chrX 138743721 138743780 -27906516 + PB1D10 SINE Alu 62 120 0 3 1643 581 150 96 40 chrX 138744868 138745032 -27905264 + Lx3C LINE L1 6821 6999 -1 3 1643 385 288 160 26 chrX 138745718 138746035 -27904261 - L1ME1 LINE L1 -206 6238 5880 3 1643 218 281 261 6 chrX 138746400 138746561 -27903735 - L2a LINE L2 -9 3417 3216 3 1643 192 152 0 0 chrX 138746569 138746602 -27903694 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 3 1643 703 114 71 24 chrX 138746602 138746728 -27903568 - B1_Mur3 SINE Alu -1 148 17 3 1643 200 170 0 41 chrX 138746819 138746868 -27903428 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 3 1643 480 255 21 0 chrX 138746868 138746962 -27903334 - B4 SINE B4 -193 99 4 3 1643 1955 175 50 17 chrX 138747142 138747502 -27902794 + ORR1D1 LTR MaLR 3 374 0 3 1643 763 268 59 37 chrX 138747502 138747773 -27902523 - L1M2 LINE L1 -508 5792 5516 3 1643 549 314 223 7 chrX 138747779 138748080 -27902216 - L1ME1 LINE L1 -292 5887 5522 3 1643 284 358 65 18 chrX 138748291 138748459 -27901837 - MIRb SINE MIR -42 226 51 3 1643 2266 171 125 40 chrX 138749066 138749571 -27900725 + Lx4B LINE L1 6504 7051 -7 3 1643 397 168 107 116 chrX 138749810 138749931 -27900365 + B1_Mm SINE Alu 1 120 -27 4 1643 296 331 69 43 chrX 138750172 138750377 -27899919 - MIR SINE MIR -58 210 8 4 1643 226 309 43 14 chrX 138751249 138751318 -27898978 + Charlie17a DNA MER1_type 123 193 -26 4 1643 436 186 204 10 chrX 138751775 138751878 -27898418 + B1_Mus2 SINE Alu 25 147 0 4 1643 337 324 44 0 chrX 138751884 138752011 -27898285 + PB1D10 SINE Alu 1 136 -13 4 1643 21 0 0 0 chrX 138752025 138752046 -27898250 + AT_rich Low_complexity Low_complexity 1 21 0 4 1643 246 233 0 0 chrX 138752099 138752159 -27898137 + (CGTG)n Simple_repeat Simple_repeat 4 63 0 4 1643 284 274 0 78 chrX 138752159 138752274 -27898022 + RMER12 LTR ERVK 736 841 -481 4 1643 21 0 0 0 chrX 138753419 138753440 -27896856 + AT_rich Low_complexity Low_complexity 1 21 0 4 1643 22 35 0 0 chrX 138753685 138753714 -27896582 + AT_rich Low_complexity Low_complexity 1 29 0 4 1643 188 241 17 0 chrX 138753777 138753835 -27896461 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 1643 247 254 0 31 chrX 138755384 138755449 -27894847 + GA-rich Low_complexity Low_complexity 4 66 0 4 1643 1545 70 5 0 chrX 138755932 138756118 -27894178 + B2_Mm1a SINE B2 1 187 -6 4 1643 681 181 35 0 chrX 138756302 138756418 -27893878 + PB1D9 SINE Alu 1 120 0 4 1643 7706 93 4 3 chrX 138756548 138757865 -27892431 - L1_Mus4 LINE L1 -4 6632 5314 4 1643 9085 90 29 1 chrX 138757864 138759841 -27890455 - L1VL4 LINE L1 -1469 2090 50 4 1643 21 57 0 0 chrX 138759844 138759879 -27890417 + AT_rich Low_complexity Low_complexity 1 35 0 4 1643 615 75 0 0 chrX 138760537 138760631 -27889665 + (TG)n Simple_repeat Simple_repeat 2 95 0 4 1643 21 0 0 0 chrX 138760698 138760719 -27889577 + AT_rich Low_complexity Low_complexity 1 21 0 4 1643 22 0 0 0 chrX 138761000 138761022 -27889274 + AT_rich Low_complexity Low_complexity 1 22 0 4 1643 424 277 161 0 chrX 138761403 138761533 -27888763 + B4 SINE B4 3 153 -139 4 1643 302 143 0 41 chrX 138761995 138762035 -27888261 + A-rich Low_complexity Low_complexity 1 38 0 4 1643 1022 95 73 0 chrX 138762035 138762172 -27888124 + B1_Mus2 SINE Alu 1 147 0 4 1643 302 143 0 41 chrX 138762172 138762204 -27888092 + A-rich Low_complexity Low_complexity 39 70 0 4 1643 379 214 155 0 chrX 138763187 138763271 -27887025 + RSINE1 SINE B4 38 134 -31 4 1643 441 169 0 0 chrX 138763296 138763379 -27886917 + (TAGA)n Simple_repeat Simple_repeat 3 85 0 4 1643 852 82 3 44 chrX 138763639 138763791 -27886505 + B1_Mm SINE Alu 5 149 0 4 1643 290 286 9 0 chrX 138763922 138764034 -27886262 + (TA)n Simple_repeat Simple_repeat 1 113 0 4 1643 260 253 147 0 chrX 138764082 138764177 -27886119 + B1F SINE Alu 32 140 -9 4 1643 262 304 13 0 chrX 138764177 138764256 -27886040 + Lx7 LINE L1 7215 7294 -402 4 1643 438 75 0 0 chrX 138764256 138764323 -27885973 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 1643 307 209 70 0 chrX 138764433 138764519 -27885777 + Lx7 LINE L1 7605 7696 0 4 1643 1009 232 33 21 chrX 138765289 138765531 -27884765 + B4A SINE B4 43 287 -5 4 1643 394 287 18 5 chrX 138765589 138765726 -27884570 + PB1D10 SINE Alu 1 142 -7 4 1643 27 0 0 0 chrX 138766154 138766181 -27884115 + AT_rich Low_complexity Low_complexity 1 27 0 4 1643 389 284 86 0 chrX 138766495 138766611 -27883685 - MIR SINE MIR -37 225 100 4 1643 575 294 25 44 chrX 138767007 138767167 -27883129 - RSINE1 SINE B4 -6 159 3 4 1643 187 287 242 23 chrX 138768551 138768683 -27881613 + MIRc SINE MIR 60 220 -48 4 1643 246 62 0 0 chrX 138768766 138768798 -27881498 + (CACCAT)n Simple_repeat Simple_repeat 4 35 0 4 1643 21 0 0 0 chrX 138769308 138769329 -27880967 + AT_rich Low_complexity Low_complexity 1 21 0 4 1643 404 171 0 14 chrX 138769412 138769483 -27880813 + L1_Mus3 LINE L1 6361 6430 -208 4 1643 764 283 0 36 chrX 138770321 138770482 -27879814 + B3A SINE B2 3 158 -40 4 1643 297 0 0 0 chrX 138770482 138770515 -27879781 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1643 764 283 0 36 chrX 138770515 138770547 -27879749 + B3A SINE B2 159 189 -9 4 1643 292 185 304 0 chrX 138770706 138770798 -27879498 - Lx7 LINE L1 -390 7306 7187 4 1643 314 245 30 3 chrX 138770785 138770864 -27879432 + Lx7 LINE L1 7029 7112 -584 4 1643 254 287 61 41 chrX 138770904 138771002 -27879294 + MER20 DNA MER1_type 2 101 -118 4 1643 383 238 214 0 chrX 138771209 138771335 -27878961 + Lx8 LINE L1 6780 6932 -541 4 1643 728 185 171 21 chrX 138771362 138771555 -27878741 + URR1B DNA MER1_type 1 222 -3 4 1643 263 285 26 59 chrX 138771419 138771572 -27878724 - CYRA11_Mm Unknown Y-chromosome -310 307 160 4 1643 1101 267 87 3 chrX 138771604 138771890 -27878406 + Lx8 LINE L1 7004 7313 -160 4 1643 4300 180 128 18 chrX 138772166 138772972 -27877324 + Lx9 LINE L1 6529 7414 -230 4 1643 1049 111 14 14 chrX 138772972 138773118 -27877178 + B1_Mus2 SINE Alu 2 147 0 4 1643 4300 180 128 18 chrX 138773118 138773186 -27877110 + Lx9 LINE L1 7415 7495 -149 4 1643 468 0 0 0 chrX 138773186 138773238 -27877058 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 1643 4300 180 128 18 chrX 138773238 138773361 -27876935 + Lx9 LINE L1 7496 7636 -8 4 1643 244 397 25 13 chrX 138774318 138774397 -27875899 + AluG_3 SINE Alu 141 220 -91 4 1643 1237 119 111 34 chrX 138774728 138774936 -27875360 - URR1A DNA MER1_type 0 226 3 4 1643 29 0 0 0 chrX 138775080 138775109 -27875187 + AT_rich Low_complexity Low_complexity 1 29 0 4 1643 1100 131 91 0 chrX 138776573 138776749 -27873547 + B2_Mm2 SINE B2 2 193 -2 4 1643 313 330 19 9 chrX 138776978 138777085 -27873211 + MER3 DNA MER1_type 1 108 -101 4 1643 584 208 58 58 chrX 138777117 138777255 -27873041 + B1_Mur4 SINE Alu 5 142 -8 4 1643 345 24 0 0 chrX 138777255 138777297 -27872999 + (CATA)n Simple_repeat Simple_repeat 2 43 0 4 1643 910 145 0 0 chrX 138778298 138778429 -27871867 + B1_Mus2 SINE Alu 4 134 -13 4 1643 2446 164 128 6 chrX 138779181 138779672 -27870624 - RMER4B LTR ERVK 0 585 35 4 1643 392 317 104 11 chrX 138780526 138780794 -27869502 + L1MA6 LINE L1 2177 2469 -3915 4 1643 327 203 0 0 chrX 138780814 138780888 -27869408 + L1MA6 LINE L1 2577 2650 -3729 4 1643 544 273 25 0 chrX 138780891 138781012 -27869284 + RSINE1 SINE B4 2 125 -40 4 1643 555 56 0 0 chrX 138781124 138781195 -27869101 + (GA)n Simple_repeat Simple_repeat 2 72 0 4 1643 423 282 95 69 chrX 138781195 138781427 -27868869 + L1MA6 LINE L1 2694 2931 -3448 4 1643 995 239 95 43 chrX 138781581 138781808 -27868488 + L1MA6 LINE L1 2922 3164 -3215 4 1643 1434 44 0 16 chrX 138781808 138781992 -27868304 + B2_Mm2 SINE B2 1 181 -14 4 1643 995 239 95 43 chrX 138781992 138782271 -27868025 + L1MA6 LINE L1 3165 3454 -2925 4 1643 386 281 23 1 chrX 138782369 138782526 -27867770 + L1MA6 LINE L1 5319 5481 -898 4 1643 1647 272 68 59 chrX 138782574 138783487 -27866809 + L1MA6 LINE L1 5592 6512 -24 4 1643 640 185 153 26 chrX 138784367 138784556 -27865740 + B3 SINE B2 1 213 -3 4 1643 433 294 178 59 chrX 138784981 138785234 -27865062 - B4A SINE B4 -5 287 5 4 1643 423 0 0 0 chrX 138785288 138785335 -27864961 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1643 212 0 0 35 chrX 138786489 138786518 -27863778 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1643 2007 167 19 8 chrX 138787246 138787609 -27862687 - ORR1B2 LTR MaLR 0 367 1 4 1643 647 244 22 7 chrX 138787725 138787861 -27862435 + B1F2 SINE Alu 6 143 -6 4 1643 234 301 34 16 chrX 138788370 138788455 -27861841 - MIR SINE MIR -164 104 13 4 1643 192 310 100 33 chrX 138788850 138788940 -27861356 + MIRc SINE MIR 86 181 -87 4 1643 286 355 223 3 chrX 138788986 138789362 -27860934 + L2a LINE L2 1177 1635 -1784 4 1643 755 178 82 0 chrX 138789499 138789634 -27860662 + B1_Mus2 SINE Alu 1 146 -1 4 1643 638 354 140 12 chrX 138789659 138790253 -27860043 + L2a LINE L2 1806 2475 -944 4 1643 270 314 92 46 chrX 138790257 138790639 -27859657 + L2a LINE L2 2892 3341 -85 4 1643 1223 150 87 5 chrX 138791670 138791878 -27858418 + URR1B DNA MER1_type 1 225 0 4 1643 525 80 0 0 chrX 138792428 138792503 -27857793 + (TA)n Simple_repeat Simple_repeat 2 76 0 4 1643 203 79 26 0 chrX 138793364 138793402 -27856894 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1643 435 119 0 0 chrX 138795331 138795398 -27854898 + (TATG)n Simple_repeat Simple_repeat 2 68 0 4 1643 1281 85 17 6 chrX 138796619 138796797 -27853499 + B2_Mm2 SINE B2 2 181 -14 4 1643 776 236 6 47 chrX 138796989 138797158 -27853138 + B3A SINE B2 1 162 -36 4 1643 23 0 0 0 chrX 138797243 138797266 -27853030 + AT_rich Low_complexity Low_complexity 1 23 0 4 1643 368 204 319 0 chrX 138797282 138797395 -27852901 + B1_Mur1 SINE Alu 1 149 0 4 1643 185 281 35 0 chrX 138797675 138797732 -27852564 + L2c LINE L2 3296 3354 -33 4 1643 219 272 145 24 chrX 138798349 138798432 -27851864 - PB1D10 SINE Alu -4 113 21 4 1643 455 299 60 36 chrX 138798492 138798794 -27851502 + L1MA10 LINE L1 5949 6257 -77 4 1643 778 196 14 7 chrX 138798799 138798938 -27851358 + B1_Mur3 SINE Alu 2 141 -8 4 1643 201 39 0 0 chrX 138798963 138798989 -27851307 + (TC)n Simple_repeat Simple_repeat 1 26 0 4 1643 2862 90 10 0 chrX 138799571 138799973 -27850323 + L1_Mus2 LINE L1 6161 6566 0 4 1643 4312 52 2 2 chrX 138800129 138800666 -27849630 + L1Md_F3 LINE L1 6045 6581 -3 4 1643 649 179 104 0 chrX 138800932 138801066 -27849230 + B1_Mur3 SINE Alu 2 149 0 4 1643 1318 86 32 11 chrX 138801126 138801315 -27848981 + B2_Mm2 SINE B2 2 194 -1 4 1643 3646 63 26 2 chrX 138801340 138801804 -27848492 + MT2C_Mm LTR ERVL 1 475 0 4 1643 5694 45 8 5 chrX 138801804 138802539 -27847757 + MERVL-int LTR ERVL 1 737 -4748 4 1643 5384 30 0 0 chrX 138802539 138803194 -27847102 + MERVL-int LTR ERVL 3806 4460 -1025 4 1643 1048 82 0 45 chrX 138803195 138803349 -27846947 + B1_Mus2 SINE Alu 1 147 0 4 1643 877 169 0 0 chrX 138803754 138803890 -27846406 - B1_Mus1 SINE Alu -9 139 4 4 1644 1076 101 75 23 chrX 138805325 138805498 -27844798 - B2_Mm2 SINE B2 -12 183 2 4 1644 432 55 0 0 chrX 138805752 138805807 -27844489 + (CATAA)n Simple_repeat Simple_repeat 2 56 0 4 1644 193 261 59 66 chrX 138806106 138806197 -27844099 + MIR SINE MIR 37 153 -115 4 1644 238 372 112 52 chrX 138806266 138806595 -27843701 + L2b LINE L2 3023 3371 -4 4 1644 1055 100 49 12 chrX 138808152 138808314 -27841982 + B2_Mm2 SINE B2 2 169 -26 4 1644 333 0 0 0 chrX 138808408 138808445 -27841851 + (CATA)n Simple_repeat Simple_repeat 4 40 0 4 1644 227 237 61 73 chrX 138808535 138808617 -27841679 + Charlie24 DNA MER1_type 806 886 -1564 5 1644 1379 51 67 0 chrX 138809187 138809365 -27840931 + B2_Mm2 SINE B2 1 190 -5 5 1644 1154 56 0 7 chrX 138809370 138809514 -27840782 + B1_Mus2 SINE Alu 4 146 -1 5 1644 37 0 0 0 chrX 138809514 138809551 -27840745 + AT_rich Low_complexity Low_complexity 1 37 0 5 1644 246 95 0 0 chrX 138809688 138809730 -27840566 + (T)n Simple_repeat Simple_repeat 1 42 0 5 1644 227 205 0 43 chrX 138809792 138809838 -27840458 + ID4 SINE ID 2 45 -38 5 1644 853 267 0 0 chrX 138810423 138810599 -27839697 - B3 SINE B2 -12 204 29 5 1644 645 267 61 22 chrX 138810826 138811006 -27839290 - RMER30 DNA MER1_type -11 191 5 5 1644 797 141 285 12 chrX 138811072 138811237 -27839059 - B3 SINE B2 -6 210 1 5 1644 1483 213 109 0 chrX 138811675 138812023 -27838273 - MTD LTR MaLR -19 400 15 5 1644 341 326 58 7 chrX 138812721 138812860 -27837436 + RSINE1 SINE B4 1 146 -19 5 1644 513 329 98 23 chrX 138813065 138813370 -27836926 - MER44A DNA MER2_type -1 338 11 5 1644 270 0 0 0 chrX 138813452 138813482 -27836814 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 1644 829 220 284 17 chrX 138813767 138814059 -27836237 + ORR1D2 LTR MaLR 1 370 0 5 1644 1134 49 21 0 chrX 138814084 138814228 -27836068 + B1_Mm SINE Alu 1 147 0 5 1644 207 139 0 0 chrX 138815197 138815233 -27835063 + (A)n Simple_repeat Simple_repeat 1 36 0 5 1644 991 100 7 7 chrX 138815311 138815452 -27834844 - B1_Mus2 SINE Alu -1 146 6 5 1644 501 228 47 24 chrX 138815887 138816023 -27834273 - B1_Mur1 SINE Alu -2 147 2 5 1644 275 356 74 0 chrX 138816589 138816738 -27833558 - Tigger13a DNA MER2_type -287 484 325 5 1644 1497 54 0 5 chrX 138816956 138817143 -27833153 + B2_Mm2 SINE B2 1 186 -9 5 1644 285 275 72 0 chrX 138817175 138817244 -27833052 + ID4 SINE ID 6 79 -4 5 1644 490 277 206 0 chrX 138818058 138818242 -27832054 - MER58A DNA MER1_type -2 222 1 5 1644 299 284 0 15 chrX 138818485 138818553 -27831743 + ID4 SINE ID 3 69 -14 5 1644 1641 5 0 11 chrX 138818716 138818904 -27831392 + B2_Mm2 SINE B2 2 187 -8 5 1644 429 20 0 0 chrX 138819183 138819233 -27831063 + (GAAA)n Simple_repeat Simple_repeat 4 53 0 5 1644 302 316 38 12 chrX 138819378 138819538 -27830758 + L1MD1 LINE L1 5169 5332 -814 5 1644 293 233 140 32 chrX 138819573 138819666 -27830630 + Lx8 LINE L1 7252 7354 -119 5 1644 901 222 128 15 chrX 138819751 138820025 -27830271 - Lx9 LINE L1 -221 7423 7119 5 1644 234 0 0 0 chrX 138820072 138820098 -27830198 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1644 1187 80 1 6 chrX 138820224 138820411 -27829885 + B2_Mm2 SINE B2 1 182 -11 5 1644 315 237 141 20 chrX 138820490 138820589 -27829707 + L1MD1 LINE L1 5535 5645 -597 5 1644 397 294 121 19 chrX 138820631 138820988 -27829308 + L1MD1 LINE L1 5782 6176 -183 5 1644 586 267 36 25 chrX 138820991 138821187 -27829109 + B3A SINE B2 1 198 0 5 1644 258 281 36 24 chrX 138821484 138821498 -27828798 + B4 SINE B4 70 84 -208 5 1644 378 214 106 24 chrX 138821498 138821604 -27828692 + PB1D9 SINE Alu 1 112 -37 5 1644 255 31 0 0 chrX 138821909 138821941 -27828355 + (T)n Simple_repeat Simple_repeat 1 32 0 5 1644 1166 74 0 0 chrX 138821941 138822089 -27828207 - B1_Mus1 SINE Alu 0 148 1 5 1644 28 0 0 0 chrX 138822098 138822126 -27828170 + AT_rich Low_complexity Low_complexity 1 28 0 5 1644 635 204 59 29 chrX 138822127 138822263 -27828033 - B1_Mur2 SINE Alu -9 140 1 5 1644 1035 225 5 5 chrX 138822266 138822480 -27827816 - B3 SINE B2 -2 214 1 5 1644 441 206 6 144 chrX 138822710 138822872 -27827424 - B1_Mur4 SINE Alu 0 150 3 5 1644 225 239 10 111 chrX 138822915 138823014 -27827282 - PB1D9 SINE Alu -31 89 1 5 1644 261 294 76 119 chrX 138823202 138823387 -27826909 - MIR3 SINE MIR -29 179 3 5 1644 1162 41 0 7 chrX 138826123 138826270 -27824026 + B1_Mus2 SINE Alu 2 147 0 5 1644 246 128 0 0 chrX 138826272 138826311 -27823985 + (GAA)n Simple_repeat Simple_repeat 2 40 0 5 1644 486 33 0 0 chrX 138826915 138826975 -27823321 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 1644 947 144 0 14 chrX 138827152 138827300 -27822996 + B1_Mus2 SINE Alu 1 146 -1 5 1644 344 250 70 0 chrX 138827349 138827449 -27822847 + PB1D10 SINE Alu 1 107 -10 5 1644 213 293 175 2 chrX 138827634 138827760 -27822536 - MIR SINE MIR -91 171 29 5 1644 358 260 121 50 chrX 138828881 138828900 -27821396 - Lx8 LINE L1 -40 7433 7415 5 1644 183 42 0 0 chrX 138828900 138828924 -27821372 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1644 358 260 121 50 chrX 138828924 138829086 -27821210 - Lx8 LINE L1 -59 7414 7239 5 1644 1187 61 0 13 chrX 138829103 138829252 -27821044 - B1_Mus2 SINE Alu 0 147 1 5 1644 263 227 33 25 chrX 138829550 138829672 -27820624 + GA-rich Low_complexity Low_complexity 5 127 0 5 1644 238 291 0 8 chrX 138829755 138829873 -27820423 + ORR1E-int LTR MaLR 623 739 -770 5 1644 396 208 0 94 chrX 138829770 138829876 -27820420 + MT2B LTR ERVL 155 250 -351 5 1644 670 96 6 1 chrX 138829781 138829889 -27820407 + B1_Mus1 SINE Alu 2 112 -8 5 1644 207 0 0 0 chrX 138829889 138829912 -27820384 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1644 1028 136 58 0 chrX 138829917 138830071 -27820225 - B2_Mm2 SINE B2 -31 164 2 5 1644 234 0 0 0 chrX 138830150 138830176 -27820120 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 1644 1222 15 0 0 chrX 138830176 138830313 -27819983 - B1_Mm SINE Alu -9 138 2 5 1644 249 311 100 39 chrX 138830396 138830573 -27819723 + MIRb SINE MIR 16 210 -58 5 1644 478 327 69 58 chrX 138830626 138830973 -27819323 + ORR1E LTR MaLR 1 351 -8 5 1644 234 329 98 1 chrX 138831348 138831462 -27818834 - MIR SINE MIR 0 268 146 5 1644 558 149 32 0 chrX 138831485 138831589 -27818707 + MTD LTR MaLR 8 113 -308 5 1644 342 0 0 0 chrX 138831594 138831632 -27818664 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 5 1644 1434 156 67 62 chrX 138831764 138832219 -27818077 - RMER17C LTR ERVK -519 439 16 5 1644 1031 227 121 4 chrX 138832203 138832468 -27817828 + MTD LTR MaLR 124 419 0 5 1644 262 288 15 0 chrX 138832627 138832693 -27817603 - B3A SINE B2 -131 67 1 5 1644 660 306 0 43 chrX 138832925 138833113 -27817183 + B3 SINE B2 37 216 0 5 1644 278 209 45 0 chrX 138833135 138833202 -27817094 - L1M5 LINE L1 -392 5732 5663 5 1644 211 342 62 12 chrX 138833218 138833298 -27816998 + ID SINE ID 4 87 -137 5 1644 755 116 91 0 chrX 138833582 138833703 -27816593 - B1_Mus1 SINE Alu 0 148 17 5 1644 297 262 0 70 chrX 138833761 138833847 -27816449 - B1_Mur2 SINE Alu 0 149 70 5 1644 201 139 0 0 chrX 138833893 138833936 -27816360 + (T)n Simple_repeat Simple_repeat 1 43 0 5 1644 285 222 16 0 chrX 138834444 138834507 -27815789 - RLTR19C LTR ERVK -409 97 34 5 1644 505 324 22 22 chrX 138834513 138834652 -27815644 - B1_Mur3 SINE Alu -10 139 1 5 1644 419 246 8 25 chrX 138834918 138835039 -27815257 + PB1D9 SINE Alu 2 120 0 5 1644 1205 28 0 14 chrX 138835054 138835201 -27815095 + B1_Mm SINE Alu 1 145 -2 5 1644 1228 94 27 11 chrX 138835249 138835432 -27814864 - B2_Mm2 SINE B2 -8 187 2 5 1644 2832 149 27 12 chrX 138835481 138835997 -27814299 + RLTR28 LTR ERVL 1 524 0 5 1644 219 111 0 43 chrX 138836068 138836115 -27814181 + A-rich Low_complexity Low_complexity 2 46 0 5 1644 1307 108 15 10 chrX 138836123 138836329 -27813967 + Lx3B LINE L1 6654 6860 -113 5 1644 1119 88 0 0 chrX 138836398 138836545 -27813751 + B1_Mm SINE Alu 1 147 0 5 1644 186 43 0 0 chrX 138836555 138836578 -27813718 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1644 850 182 13 7 chrX 138836587 138836736 -27813560 + B1_Mur4 SINE Alu 1 150 0 5 1644 184 277 14 84 chrX 138838088 138838159 -27812137 - MIR3 SINE MIR -14 194 129 5 1644 750 188 0 34 chrX 138838447 138838596 -27811700 - B1_Mur2 SINE Alu -1 148 5 5 1644 22 35 0 0 chrX 138838606 138838635 -27811661 + AT_rich Low_complexity Low_complexity 1 29 0 5 1644 1307 272 42 67 chrX 138839109 138839724 -27810572 + L1MB5 LINE L1 5386 5985 -189 5 1644 28 0 0 0 chrX 138839814 138839842 -27810454 + AT_rich Low_complexity Low_complexity 1 28 0 5 1644 409 257 57 83 chrX 138839919 138839948 -27810348 + ID_B1 SINE B4 65 217 -7 5 1644 444 200 86 62 chrX 138839948 138840076 -27810220 + B1F SINE Alu 12 142 -7 5 1644 209 191 43 0 chrX 138840233 138840280 -27810016 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 5 1644 212 167 24 0 chrX 138841014 138841056 -27809240 - B3A SINE B2 -155 43 1 5 1644 416 228 0 60 chrX 138841195 138841279 -27809017 + RSINE1 SINE B4 36 114 -51 5 1644 261 0 0 0 chrX 138841281 138841310 -27808986 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1644 384 22 0 0 chrX 138841310 138841354 -27808942 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 1644 339 159 290 89 chrX 138841484 138841526 -27808770 - B2_Mm2 SINE B2 0 195 162 5 1644 300 27 0 0 chrX 138841526 138841563 -27808733 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 5 1644 339 159 290 89 chrX 138841563 138841644 -27808652 - B2_Mm2 SINE B2 -34 161 47 5 1644 1170 123 6 0 chrX 138841714 138841884 -27808412 - B2_Mm1t SINE B2 -22 171 1 5 1644 1296 44 0 0 chrX 138841972 138842132 -27808164 - L1_Mus1 LINE L1 -1 6566 6407 5 1644 403 21 0 0 chrX 138842132 138842179 -27808117 + L1_Mus1 LINE L1 6353 6399 -168 5 1644 1365 250 43 6 chrX 138842317 138842639 -27807657 - MTD LTR MaLR -85 334 1 5 1644 2513 140 16 62 chrX 138843353 138843841 -27806455 - RMER4A LTR ERVK 0 466 1 5 1644 234 0 0 0 chrX 138843845 138843871 -27806425 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1644 446 281 0 58 chrX 138844304 138844425 -27805871 + PB1D9 SINE Alu 2 115 -5 6 1644 471 113 0 0 chrX 138844425 138844496 -27805800 + (GGA)n Simple_repeat Simple_repeat 3 73 0 6 1644 1872 163 47 3 chrX 138844910 138845248 -27805048 - Lx4A LINE L1 -3 7055 6703 6 1644 6388 98 17 21 chrX 138845407 138846382 -27803914 - Lx4A LINE L1 -344 6714 5744 6 1644 5497 28 0 0 chrX 138846586 138847223 -27803073 + L1Md_T LINE L1 5946 6582 0 6 1644 1948 175 54 3 chrX 138847568 138847917 -27802379 + ORR1C1 LTR MaLR 12 378 0 6 1644 1125 284 102 21 chrX 138849176 138849694 -27800602 + L1MCa LINE L1 379 938 -5570 6 1644 1587 154 87 71 chrX 138849716 138849961 -27800335 - ORR1C2 LTR MaLR 0 384 120 6 1644 2489 184 212 10 chrX 138849961 138850574 -27799722 + RMER19A LTR ERVK 1 737 0 6 1644 1587 154 87 71 chrX 138850574 138850706 -27799590 - ORR1C2 LTR MaLR -265 119 1 6 1644 739 270 198 90 chrX 138850856 138850883 -27799413 - MT2B2 LTR ERVL -20 564 529 6 1644 327 25 0 0 chrX 138850883 138850923 -27799373 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1644 739 270 198 90 chrX 138850923 138851404 -27798892 - MT2B2 LTR ERVL -56 528 2 6 1644 426 283 0 14 chrX 138851406 138851553 -27798743 + L1MCa LINE L1 1072 1216 -5292 6 1644 230 261 200 7 chrX 138851725 138851860 -27798436 + L1MCa LINE L1 1316 1476 -5032 6 1644 415 279 49 8 chrX 138851860 138851983 -27798313 - B1F1 SINE Alu -12 137 10 6 1644 543 258 26 17 chrX 138851987 138852220 -27798076 + L1MCa LINE L1 1499 1733 -4775 6 1644 794 302 10 24 chrX 138852225 138852420 -27797876 + B3 SINE B2 6 202 -14 6 1644 204 40 0 0 chrX 138852420 138852445 -27797851 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 6 1644 794 302 10 24 chrX 138852445 138852456 -27797840 + B3 SINE B2 203 209 -7 6 1644 402 122 122 0 chrX 138852465 138852547 -27797749 - Lx2 LINE L1 -103 6894 6803 6 1644 3063 233 41 12 chrX 138853010 138853758 -27796538 + RMER1C Other Other 530 1299 -43 6 1644 1212 48 7 0 chrX 138853758 138853904 -27796392 + B1_Mm SINE Alu 1 147 0 6 1644 255 235 74 16 chrX 138853952 138854073 -27796223 + L1MCa LINE L1 1796 1923 -4585 6 1644 312 324 44 18 chrX 138854166 138854279 -27796017 + PB1D10 SINE Alu 1 116 -1 6 1644 789 260 88 0 chrX 138854443 138854635 -27795661 + B3 SINE B2 1 209 -7 6 1644 21 57 0 0 chrX 138854635 138854670 -27795626 + AT_rich Low_complexity Low_complexity 1 35 0 6 1644 431 194 113 0 chrX 138854673 138854797 -27795499 + L1MCa LINE L1 2217 2354 -4154 6 1644 231 33 0 0 chrX 138854806 138854814 -27795482 + (A)n Simple_repeat Simple_repeat 1 8 0 6 1644 1195 61 0 0 chrX 138854814 138854961 -27795335 + B1_Mus2 SINE Alu 1 147 0 6 1644 231 33 0 0 chrX 138854961 138854982 -27795314 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1644 27 0 0 0 chrX 138855087 138855114 -27795182 + AT_rich Low_complexity Low_complexity 1 27 0 6 1644 735 181 60 0 chrX 138855124 138855257 -27795039 + B1_Mur3 SINE Alu 2 142 -7 6 1644 1195 69 0 0 chrX 138855269 138855414 -27794882 + B1_Mm SINE Alu 1 145 -2 6 1644 647 84 11 0 chrX 138855414 138855509 -27794787 + (TA)n Simple_repeat Simple_repeat 2 97 0 6 1644 368 263 66 74 chrX 138855552 138855794 -27794502 + L1MCa LINE L1 2396 2635 -3686 6 1644 859 245 83 20 chrX 138855820 138856074 -27794222 + Lx6 LINE L1 7133 7402 -58 6 1644 272 154 62 0 chrX 138856100 138856165 -27794131 + Lx5 LINE L1 6982 7050 0 6 1644 2097 269 102 67 chrX 138856239 138856385 -27793911 + L1MCa LINE L1 2685 2826 -3495 6 1644 310 295 67 0 chrX 138856385 138856490 -27793806 + PB1D10 SINE Alu 1 112 -5 6 1644 2097 269 102 67 chrX 138856490 138857748 -27792548 + L1MCa LINE L1 2827 4139 -2182 6 1644 411 289 53 13 chrX 138857786 138857937 -27792359 + L1MC1 LINE L1 6125 6281 -52 6 1644 224 345 166 0 chrX 138858273 138858412 -27791884 - L2a LINE L2 -2 3424 3263 6 1644 301 302 12 0 chrX 138858718 138858804 -27791492 + B1F SINE Alu 56 142 -7 6 1644 227 163 41 0 chrX 138859000 138859049 -27791247 + (TTG)n Simple_repeat Simple_repeat 1 51 0 6 1644 838 196 0 0 chrX 138859049 138859197 -27791099 - B1_Mur4 SINE Alu -2 148 1 6 1644 217 325 138 62 chrX 138860215 138860504 -27789792 - L2a LINE L2 -608 2811 2501 6 1644 190 261 42 28 chrX 138861396 138861467 -27788829 + MIRc SINE MIR 158 229 -39 6 1644 192 77 0 0 chrX 138862004 138862030 -27788266 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 1644 384 22 0 0 chrX 138862063 138862108 -27788188 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1644 317 257 9 65 chrX 138862249 138862357 -27787939 + L2a LINE L2 3305 3406 -20 6 1644 382 308 39 0 chrX 138862488 138862592 -27787704 + RSINE1 SINE B4 2 109 -56 6 1644 871 158 48 12 chrX 138862931 138863098 -27787198 + B2_Mm1t SINE B2 3 175 -18 6 1644 267 31 0 0 chrX 138863366 138863398 -27786898 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 6 1644 220 348 47 70 chrX 138864097 138864310 -27785986 + MIR SINE MIR 9 216 -46 6 1644 185 211 0 19 chrX 138864398 138864451 -27785845 + GA-rich Low_complexity Low_complexity 4 55 0 6 1644 215 61 0 29 chrX 138864459 138864493 -27785803 + (GAAA)n Simple_repeat Simple_repeat 1 33 0 6 1644 449 274 9 9 chrX 138864762 138864869 -27785427 + ID_B1 SINE B4 112 218 -6 6 1644 206 323 120 84 chrX 138865160 138865302 -27784994 - L2b LINE L2 -5 3370 3224 6 1644 425 295 21 102 chrX 138865396 138865679 -27784617 + L1MA4 LINE L1 5665 5924 -376 6 1644 447 19 0 0 chrX 138865852 138865904 -27784392 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1644 26 0 0 0 chrX 138866265 138866291 -27784005 + AT_rich Low_complexity Low_complexity 1 26 0 6 1644 248 243 202 95 chrX 138866376 138866544 -27783752 + B2_Mm2 SINE B2 3 188 -7 6 1644 279 0 0 0 chrX 138866715 138866746 -27783550 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 1644 392 181 12 0 chrX 138867395 138867478 -27782818 + GA-rich Low_complexity Low_complexity 1 84 0 6 1644 434 325 43 132 chrX 138867617 138868011 -27782285 + MTEa LTR MaLR 21 379 0 6 1644 470 204 53 9 chrX 138868795 138868909 -27781387 + PB1D9 SINE Alu 1 119 -1 6 1644 3493 15 5 0 chrX 138868945 138869339 -27780957 + MTA_Mm LTR MaLR 1 396 0 6 1644 754 211 116 0 chrX 138869339 138869571 -27780725 + Lx9 LINE L1 7327 7585 -59 6 1644 261 252 43 35 chrX 138870700 138870815 -27779481 + L1M2 LINE L1 2197 2312 -3831 6 1644 865 310 22 13 chrX 138871132 138871358 -27778938 + B4A SINE B4 2 229 -63 6 1644 720 200 50 0 chrX 138871358 138871498 -27778798 + B1_Mur2 SINE Alu 1 147 -2 6 1644 305 294 48 63 chrX 138871622 138871811 -27778485 + L1M2 LINE L1 2572 2757 -3386 6 1644 416 220 176 29 chrX 138871907 138872043 -27778253 - B3 SINE B2 -4 212 57 6 1644 1242 293 46 44 chrX 138872035 138872488 -27777808 - MTEa-int LTR MaLR -1126 454 1 6 1644 953 270 23 50 chrX 138872490 138872792 -27777504 - MTEa LTR MaLR 0 370 87 6 1644 491 209 96 18 chrX 138872795 138872961 -27777335 + Lx5 LINE L1 6869 7047 -3 6 1644 255 250 130 0 chrX 138873170 138873262 -27777034 + L1MA4 LINE L1 5836 5939 -361 6 1644 233 298 22 97 chrX 138875707 138875887 -27774409 - MLT1A1 LTR MaLR -13 395 175 6 1644 495 263 14 112 chrX 138876031 138876196 -27774100 + LTR37A LTR ERV1 197 359 -67 6 1644 299 291 0 25 chrX 138876196 138876277 -27774019 - ID4 SINE ID -4 79 1 6 1644 495 263 14 112 chrX 138876277 138876334 -27773962 + LTR37A LTR ERV1 360 397 -29 6 1644 181 342 101 17 chrX 138876414 138876533 -27773763 + MIRc SINE MIR 110 238 -30 6 1644 1130 56 0 37 chrX 138876601 138876788 -27773508 + (TTC)n Simple_repeat Simple_repeat 1 180 0 6 1644 590 99 0 11 chrX 138876788 138876797 -27773499 + (TTCTCC)n Simple_repeat Simple_repeat 1 9 0 6 1644 2375 63 119 11 chrX 138876797 138877149 -27773147 - RLTR10 LTR ERVK 0 390 1 6 1644 590 99 0 11 chrX 138877149 138877231 -27773065 + (TTCTCC)n Simple_repeat Simple_repeat 3 84 0 6 1644 1178 75 0 0 chrX 138877236 138877383 -27772913 - B1_Mus2 SINE Alu 0 147 1 6 1644 225 0 0 0 chrX 138877953 138877978 -27772318 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 6 1644 3015 161 91 22 chrX 138878270 138878494 -27771802 + ORR1C2-int LTR MaLR 864 1127 -382 6 1644 726 44 0 0 chrX 138878494 138878584 -27771712 + (GGGA)n Simple_repeat Simple_repeat 3 92 0 6 1644 3015 161 91 22 chrX 138878584 138878962 -27771334 + ORR1C2-int LTR MaLR 1128 1507 -2 6 1644 609 158 166 0 chrX 138878968 138879107 -27771189 + ORR1C2 LTR MaLR 33 194 -190 6 1644 300 70 0 0 chrX 138879109 138879152 -27771144 + (TC)n Simple_repeat Simple_repeat 1 43 0 6 1644 902 206 94 8 chrX 138879161 138879375 -27770921 + ORR1C2 LTR MaLR 149 384 0 6 1644 576 244 14 22 chrX 138879445 138879583 -27770713 + B1_Mur1 SINE Alu 5 141 -8 6 1644 508 320 39 30 chrX 138879590 138879819 -27770477 - LTR40c LTR ERVL -121 341 105 6 1644 7838 46 2 1 chrX 138879822 138880850 -27769446 - L1Md_F2 LINE L1 0 6582 5549 6 1644 598 232 0 53 chrX 138880859 138880924 -27769372 - B3 SINE B2 -90 126 64 6 1644 1880 161 130 11 chrX 138880924 138881300 -27768996 + MTC LTR MaLR 1 421 0 6 1644 598 232 0 53 chrX 138881300 138881366 -27768930 - B3 SINE B2 -153 63 2 6 1644 377 297 33 33 chrX 138881366 138881498 -27768798 - LTR40c LTR ERVL -333 132 1 6 1644 680 61 0 0 chrX 138881828 138881927 -27768369 - L1Md_F2 LINE L1 -14 6568 6470 6 1644 690 218 213 0 chrX 138882048 138882222 -27768074 - B3 SINE B2 -4 212 2 6 1644 227 279 16 0 chrX 138882753 138882814 -27767482 + ORR1E LTR MaLR 77 138 -221 6 1644 816 336 58 31 chrX 138883930 138884518 -27765778 - MLT-int LTR MaLR -925 655 41 6 1644 588 283 104 10 chrX 138885860 138886053 -27764243 - MLT1D LTR MaLR -18 487 277 6 1644 628 238 63 0 chrX 138886117 138886260 -27764036 - MLT1D LTR MaLR -353 152 1 6 1644 968 208 66 0 chrX 138886288 138886485 -27763811 + B3 SINE B2 1 210 -6 6 1644 270 380 53 0 chrX 138886510 138886623 -27763673 + PB1D7 SINE Alu 2 120 0 6 1644 460 318 104 31 chrX 138886650 138887033 -27763263 + L1MD1 LINE L1 4763 5173 -973 6 1644 299 253 45 100 chrX 138887037 138887049 -27763247 + MT2B LTR ERVL 154 159 -442 6 1644 596 225 54 0 chrX 138887049 138887160 -27763136 + B1_Mur2 SINE Alu 1 117 -32 6 1644 424 242 8 0 chrX 138887178 138887298 -27762998 + L1MD1 LINE L1 5182 5302 -844 6 1644 923 238 34 15 chrX 138887303 138887508 -27762788 + B3 SINE B2 1 209 -7 6 1644 1303 260 62 37 chrX 138887528 138888034 -27762262 + L1MD1 LINE L1 5322 5847 -395 6 1644 264 30 0 0 chrX 138888034 138888067 -27762229 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 6 1644 1303 260 62 37 chrX 138888067 138888158 -27762138 + L1MD1 LINE L1 5848 5934 -308 6 1644 335 247 0 11 chrX 138888173 138888255 -27762041 - PB1D10 SINE Alu 0 120 44 6 1644 2039 74 37 0 chrX 138888400 138888670 -27761626 + L1_Mus1 LINE L1 6288 6567 0 6 1644 204 48 47 23 chrX 138888802 138888845 -27761451 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 6 1644 334 277 26 18 chrX 138889207 138889321 -27760975 + L1MB7 LINE L1 5328 5442 -736 6 1644 394 324 21 21 chrX 138889321 138889466 -27760830 + B1F SINE Alu 1 145 -4 6 1644 1181 315 91 21 chrX 138889575 138890200 -27760096 + L1MB7 LINE L1 5439 6107 -77 6 1644 371 321 0 0 chrX 138890220 138890329 -27759967 + PB1D10 SINE Alu 1 109 -8 6 1644 261 0 0 0 chrX 138891577 138891606 -27758690 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 6 1644 1235 54 0 0 chrX 138891806 138891954 -27758342 + B1_Mus1 SINE Alu 1 148 0 7 1644 221 0 35 0 chrX 138891954 138891983 -27758313 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 7 1644 930 41 8 0 chrX 138892278 138892401 -27757895 - B2_Mm2 SINE B2 -67 128 5 7 1644 1130 64 0 6 chrX 138892833 138892991 -27757305 - B2_Mm2 SINE B2 -11 184 28 7 1644 1196 62 0 0 chrX 138893015 138893161 -27757135 - B1_Mus2 SINE Alu 0 147 2 7 1644 366 123 0 0 chrX 138893578 138893635 -27756661 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1644 324 304 29 0 chrX 138893641 138893743 -27756553 - RSINE1 SINE B4 -23 142 38 7 1644 216 0 0 0 chrX 138895364 138895388 -27754908 + (CAG)n Simple_repeat Simple_repeat 2 25 0 7 1644 1207 68 0 0 chrX 138896135 138896282 -27754014 + B1_Mus1 SINE Alu 1 147 -1 7 1644 204 111 0 0 chrX 138896283 138896319 -27753977 + (A)n Simple_repeat Simple_repeat 1 36 0 7 1644 255 336 37 9 chrX 138896541 138896649 -27753647 + MIR SINE MIR 18 128 -134 7 1644 806 279 37 0 chrX 138896893 138897108 -27753188 + B4A SINE B4 5 227 -65 7 1644 252 0 0 0 chrX 138897161 138897189 -27753107 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 1644 553 125 75 133 chrX 138898467 138898587 -27751709 - B1_Mus2 SINE Alu -21 126 14 7 1644 253 237 0 67 chrX 138898595 138898699 -27751597 + C-rich Low_complexity Low_complexity 2 98 0 7 1644 631 53 105 0 chrX 138899064 138899159 -27751137 + L1_Mus1 LINE L1 6463 6567 0 7 1644 243 190 0 108 chrX 138899890 138899955 -27750341 + MIR SINE MIR 100 157 -105 7 1644 278 165 88 108 chrX 138900791 138900893 -27749403 + L1MB4 LINE L1 5876 5975 -205 7 1644 2769 105 85 9 chrX 138901189 138901375 -27748921 + Lx4A LINE L1 6562 6766 -292 7 1644 261 0 0 0 chrX 138901375 138901404 -27748892 + (TA)n Simple_repeat Simple_repeat 1 29 0 7 1644 2769 105 85 9 chrX 138901404 138901677 -27748619 + Lx4A LINE L1 6767 7055 -3 7 1644 24 0 0 0 chrX 138901678 138901702 -27748594 + AT_rich Low_complexity Low_complexity 1 24 0 7 1644 293 241 0 71 chrX 138902062 138902147 -27748149 - ID_B1 SINE B4 -127 97 19 7 1644 2663 147 7 70 chrX 138902400 138902942 -27747354 + RLTR28 LTR ERVL 1 508 -16 7 1644 525 263 7 21 chrX 138903345 138903485 -27746811 + ID_B1 SINE B4 86 223 -1 7 1644 965 159 0 0 chrX 138904962 138905107 -27745189 + B1_Mus2 SINE Alu 1 145 -2 7 1644 224 401 7 0 chrX 138905362 138905499 -27744797 - MER5A DNA MER1_type -51 138 1 7 1644 430 249 175 55 chrX 138905858 138906025 -27744271 + MTD LTR MaLR 182 380 -39 7 1644 1564 58 0 5 chrX 138906025 138906217 -27744079 - B2_Mm1t SINE B2 -2 191 1 7 1644 430 249 175 55 chrX 138906217 138906249 -27744047 + MTD LTR MaLR 381 405 -14 7 1644 230 156 0 0 chrX 138906568 138906613 -27743683 + A-rich Low_complexity Low_complexity 1 45 0 7 1644 558 128 0 0 chrX 138907099 138907193 -27743103 + (GGAA)n Simple_repeat Simple_repeat 3 96 0 7 1644 817 180 0 14 chrX 138907239 138907380 -27742916 - B1_Mur2 SINE Alu -6 143 5 7 1644 316 224 13 38 chrX 138907916 138907995 -27742301 - ID4 SINE ID -1 82 6 7 1644 311 212 131 0 chrX 138908000 138908099 -27742197 - MER2 DNA MER2_type -140 205 94 7 1644 2100 121 74 16 chrX 138908100 138908597 -27741699 - MT2B LTR ERVL -1 600 4 7 1644 568 261 14 34 chrX 138910116 138910263 -27740033 - RSINE1 SINE B4 -19 146 3 7 1644 327 343 62 78 chrX 138910285 138910478 -27739818 - MIRb SINE MIR -22 246 57 7 1644 21 0 0 0 chrX 138910545 138910566 -27739730 + AT_rich Low_complexity Low_complexity 1 21 0 7 1644 262 187 4 0 chrX 138910660 138910718 -27739578 - MIRc SINE MIR -146 122 61 7 1644 659 256 18 48 chrX 138910735 138910903 -27739393 + RSINE1 SINE B4 3 165 0 7 1644 369 309 14 56 chrX 138911071 138911215 -27739081 - MER58B DNA MER1_type -30 311 174 7 1644 1212 218 114 66 chrX 138911469 138911891 -27738405 - RMER10A LTR ERVL 0 442 1 7 1644 225 0 0 0 chrX 138911932 138911957 -27738339 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 7 1644 286 383 19 0 chrX 138912783 138912890 -27737406 + L2c LINE L2 3060 3168 -219 7 1644 290 224 26 0 chrX 138913339 138913415 -27736881 + RMER15 LTR ERVL 408 485 -90 7 1644 324 64 0 0 chrX 138914277 138914324 -27735972 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 7 1644 540 0 0 0 chrX 138914464 138914524 -27735772 + (GA)n Simple_repeat Simple_repeat 2 61 0 7 1644 1265 146 0 0 chrX 138914658 138914864 -27735432 - MTC LTR MaLR -213 208 3 7 1644 548 211 120 38 chrX 138914864 138915022 -27735274 + B3 SINE B2 45 215 -1 7 1644 450 238 233 90 chrX 138915063 138915252 -27735044 - B3A SINE B2 0 216 1 7 1644 24 0 0 0 chrX 138915328 138915352 -27734944 + AT_rich Low_complexity Low_complexity 1 24 0 7 1644 812 158 283 6 chrX 138915352 138915518 -27734778 - B3 SINE B2 -4 212 1 7 1644 227 250 40 80 chrX 138915567 138915667 -27734629 - MIR SINE MIR -152 110 15 7 1644 921 159 14 0 chrX 138916859 138917004 -27733292 + B1_Mur3 SINE Alu 2 148 -1 7 1644 23 0 0 0 chrX 138917009 138917032 -27733264 + AT_rich Low_complexity Low_complexity 1 23 0 7 1644 1241 48 0 0 chrX 138917684 138917831 -27732465 - B1_Mus2 SINE Alu 0 147 1 7 1644 3452 226 140 18 chrX 138917831 138918967 -27731329 - RMER1A Other Other -10 1020 1 7 1644 1320 178 182 23 chrX 138919062 138919431 -27730865 - RMER1B Other Other -651 415 53 7 1644 643 233 24 36 chrX 138920020 138920185 -27730111 - RSINE1 SINE B4 0 165 3 7 1644 641 225 29 14 chrX 138921030 138921170 -27729126 - B1_Mur1 SINE Alu -7 142 1 7 1644 675 70 0 0 chrX 138921263 138921349 -27728947 - L1_Mm LINE L1 -3424 2459 2374 7 1644 5736 61 1 0 chrX 138921349 138922057 -27728239 + L1_Mus2 LINE L1 5857 6565 -1 7 1644 229 313 24 0 chrX 138922601 138922684 -27727612 + PB1D10 SINE Alu 7 91 -26 7 1644 819 143 206 0 chrX 138922692 138922867 -27727429 - URR1A DNA MER1_type -15 211 1 7 1644 351 0 0 0 chrX 138923023 138923062 -27727234 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1644 22 0 0 0 chrX 138923175 138923197 -27727099 + AT_rich Low_complexity Low_complexity 1 22 0 7 1644 771 126 0 0 chrX 138924053 138924180 -27726116 + (TTTC)n Simple_repeat Simple_repeat 4 130 0 7 1644 2111 193 97 0 chrX 138924181 138924574 -27725722 - Lx5 LINE L1 -12 7038 6608 7 1644 333 0 0 0 chrX 138924998 138925035 -27725261 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1644 346 289 0 102 chrX 138926408 138926516 -27723780 - ID_B1 SINE B4 -31 193 97 7 1644 1121 60 7 0 chrX 138926539 138926689 -27723607 + (TTTC)n Simple_repeat Simple_repeat 4 154 0 7 1644 209 217 0 0 chrX 138927280 138927326 -27722970 + T-rich Low_complexity Low_complexity 1 46 0 7 1644 1163 61 7 0 chrX 138927326 138927473 -27722823 - B1_Mus1 SINE Alu 0 148 1 7 1644 222 37 0 0 chrX 138927748 138927775 -27722521 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1644 189 74 0 0 chrX 138927775 138927802 -27722494 + (TA)n Simple_repeat Simple_repeat 2 28 0 7 1644 180 0 0 0 chrX 138927898 138927918 -27722378 + (TC)n Simple_repeat Simple_repeat 2 21 0 7 1644 396 0 0 0 chrX 138927918 138927961 -27722335 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1644 630 284 60 27 chrX 138927968 138928268 -27722028 - L1M2 LINE L1 -521 5779 5470 7 1644 6503 178 104 47 chrX 138928283 138929991 -27720305 - Lx4B LINE L1 -37 7021 5166 7 1644 480 188 72 4 chrX 138930021 138930128 -27720168 - B1_Mur4 SINE Alu 0 150 39 7 1644 761 305 7 20 chrX 138930128 138930429 -27719867 - L1M2 LINE L1 -994 5149 4853 7 1644 289 281 194 24 chrX 138930432 138930445 -27719851 + ID_B1 SINE B4 80 224 0 7 1644 307 250 27 63 chrX 138930445 138930556 -27719740 + PB1D10 SINE Alu 10 116 -1 7 1644 911 269 34 12 chrX 138930582 138930909 -27719387 - L1M2 LINE L1 -1327 4816 4433 7 1644 457 273 102 0 chrX 138930937 138931065 -27719231 + RSINE1 SINE B4 3 143 -22 7 1644 279 54 0 0 chrX 138931073 138931110 -27719186 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1644 505 273 153 0 chrX 138931227 138931403 -27718893 - B3A SINE B2 -13 203 1 7 1644 180 0 0 0 chrX 138931603 138931623 -27718673 + (TTTTA)n Simple_repeat Simple_repeat 5 24 0 7 1644 1133 94 0 0 chrX 138931623 138931782 -27718514 - B2_Mm2 SINE B2 -36 159 1 7 1644 548 194 0 37 chrX 138931882 138932016 -27718280 - Lx4B LINE L1 -4 7054 6926 7 1644 1062 229 87 98 chrX 138932113 138932481 -27717815 + MTEb LTR MaLR 5 368 -11 7 1644 866 301 119 9 chrX 138932491 138932810 -27717486 + MTEb-int LTR MaLR 1 354 -1226 7 1644 423 0 0 0 chrX 138932834 138932881 -27717415 + (TA)n Simple_repeat Simple_repeat 1 47 0 7 1644 270 0 0 0 chrX 138933538 138933568 -27716728 + (TC)n Simple_repeat Simple_repeat 2 31 0 7 1644 253 219 0 123 chrX 138933685 138933758 -27716538 - PB1D7 SINE Alu -51 69 6 7 1644 413 81 0 16 chrX 138933832 138933895 -27716401 + (TCC)n Simple_repeat Simple_repeat 3 64 0 7 1644 3216 167 74 85 chrX 138935078 138935432 -27714864 - RLTR40 LTR ERVK -15 802 469 7 1644 441 0 0 0 chrX 138935432 138935481 -27714815 + (TA)n Simple_repeat Simple_repeat 2 50 0 7 1644 3216 167 74 85 chrX 138935481 138935937 -27714359 - RLTR40 LTR ERVK -349 468 1 7 1644 577 204 76 0 chrX 138936096 138936221 -27714075 - MTC LTR MaLR 0 421 287 7 205 1167 62 0 14 chrX 138936221 138936369 -27713927 + B1_Mus1 SINE Alu 1 146 -2 7 1645 195 69 0 0 chrX 138936375 138936404 -27713892 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1645 255 103 0 0 chrX 138936407 138936446 -27713850 - MTC LTR MaLR -120 301 263 7 1645 4941 125 12 50 chrX 138936553 138937413 -27712883 - MusHAL1 LINE L1 -597 2115 1289 7 1645 6473 141 93 23 chrX 138937406 138938831 -27711465 + Lx2B LINE L1 5460 6998 -2 7 1645 24 67 0 0 chrX 138939241 138939286 -27711010 + AT_rich Low_complexity Low_complexity 1 45 0 7 1645 1331 236 78 11 chrX 138940162 138940509 -27709787 + ORR1D2 LTR MaLR 1 370 0 8 1645 268 243 68 0 chrX 138940772 138940846 -27709450 + ID4 SINE ID 1 79 -4 8 1645 357 329 30 24 chrX 138940935 138941100 -27709196 - Tigger16b DNA Tigger -3 334 169 8 1645 392 313 81 16 chrX 138941870 138942055 -27708241 + Charlie21a DNA MER1_type 258 454 -759 8 1645 1240 267 29 26 chrX 138942061 138942446 -27707850 + MLT1B LTR MaLR 3 388 -2 8 1645 1040 91 28 0 chrX 138942465 138942608 -27707688 - B1_Mus1 SINE Alu 0 148 2 8 1645 226 119 48 0 chrX 138942642 138942684 -27707612 - PB1D10 SINE Alu -1 116 73 8 1645 573 179 0 19 chrX 138942741 138942849 -27707447 - B1_Mur2 SINE Alu 0 149 44 8 1645 606 312 101 19 chrX 138942850 138943337 -27706959 + Charlie21a DNA MER1_type 470 996 -217 8 1645 785 20 0 10 chrX 138943360 138943462 -27706834 - B1_Mm SINE Alu 0 147 47 8 1645 264 154 0 37 chrX 138943419 138943473 -27706823 - 4.5SRNA scRNA scRNA -8 86 35 8 1645 313 357 44 9 chrX 138943538 138943651 -27706645 + MLT1F2 LTR MaLR 16 132 -428 8 1645 381 294 64 75 chrX 138943775 138943897 -27706399 + MLT1F2 LTR MaLR 194 315 -245 8 1645 212 0 0 35 chrX 138943897 138943926 -27706370 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 8 1645 381 294 64 75 chrX 138943926 138943976 -27706320 + MLT1F2 LTR MaLR 316 364 -196 8 1645 1570 221 57 62 chrX 138943979 138944206 -27706090 - MTC LTR MaLR -4 417 211 8 1645 1454 139 50 11 chrX 138944206 138944468 -27705828 - Lx2 LINE L1 -4 6993 6722 8 1645 1570 221 57 62 chrX 138944468 138944659 -27705637 - MTC LTR MaLR -211 210 1 8 1645 390 282 83 8 chrX 138944681 138944813 -27705483 + MLT1F2 LTR MaLR 410 551 -9 8 1645 312 278 40 45 chrX 138944803 138944980 -27705316 + Charlie21a DNA MER1_type 1038 1213 0 8 1645 396 0 0 0 chrX 138945399 138945443 -27704853 + (T)n Simple_repeat Simple_repeat 1 44 0 8 1645 185 327 0 0 chrX 138946039 138946091 -27704205 - MIR SINE MIR -113 149 98 8 1645 443 248 37 19 chrX 138946106 138946213 -27704083 - B1_Mur1 SINE Alu -37 112 4 8 1645 1201 255 31 64 chrX 138946663 138946832 -27703464 + MTEb LTR MaLR 1 171 -208 8 1645 405 102 0 0 chrX 138946832 138946891 -27703405 + (CAAG)n Simple_repeat Simple_repeat 1 59 0 8 1645 1201 255 31 64 chrX 138946891 138947111 -27703185 + MTEb LTR MaLR 172 377 -2 8 1645 276 30 0 0 chrX 138947538 138947571 -27702725 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 8 1645 777 216 55 6 chrX 138947735 138947917 -27702379 - B2_Mm2 SINE B2 -1 194 4 8 1645 243 0 0 0 chrX 138948717 138948744 -27701552 + (A)n Simple_repeat Simple_repeat 1 27 0 8 1645 717 185 39 0 chrX 138948995 138949125 -27701171 - B1_Mus1 SINE Alu -13 135 1 8 1645 1734 330 34 12 chrX 138949470 138950049 -27700247 + MTE-int LTR MaLR 936 1527 -53 8 1645 390 339 43 54 chrX 138950049 138950372 -27699924 + ORR1E LTR MaLR 1 319 -55 8 1645 317 260 0 0 chrX 138950743 138950820 -27699476 - ID4 SINE ID -3 80 4 8 1645 268 270 229 3 chrX 138951417 138951549 -27698747 + MIR SINE MIR 46 201 -67 8 1645 581 291 92 76 chrX 138952438 138952754 -27697542 - ORR1E LTR MaLR 0 359 39 8 1645 961 241 5 24 chrX 138952852 138953060 -27697236 - B3 SINE B2 -12 204 1 8 1645 572 157 0 53 chrX 138953166 138953280 -27697016 - B1_Mur2 SINE Alu 0 149 42 8 1645 323 184 26 0 chrX 138953369 138953445 -27696851 + CT-rich Low_complexity Low_complexity 2 79 0 8 1645 1082 48 0 7 chrX 138954364 138954511 -27695785 + B1_Mus2 SINE Alu 2 147 0 8 1645 230 346 0 0 chrX 138954687 138954768 -27695528 - ID4 SINE ID -1 82 2 8 1645 334 256 176 0 chrX 138954787 138954912 -27695384 - B1F2 SINE Alu -2 147 1 8 1645 724 225 103 15 chrX 138955710 138955913 -27694383 - ID_B1 SINE B4 -3 221 1 8 1645 709 261 53 15 chrX 138956321 138956529 -27693767 - Lx8 LINE L1 -1128 6516 6200 8 1645 369 257 0 0 chrX 138956534 138956643 -27693653 + GA-rich Low_complexity Low_complexity 3 111 0 8 1645 2679 44 11 181 chrX 138956644 138957114 -27693182 + RLTR10 LTR ERVK 1 390 0 8 1645 1420 41 0 0 chrX 138957123 138957292 -27693004 + RLTR10-int LTR ERVK 39 207 -1780 8 1645 675 52 10 10 chrX 138957292 138957390 -27692906 + RLTR10 LTR ERVK 314 411 0 8 1645 5864 18 36 0 chrX 138957390 138958053 -27692243 + RLTR10-int LTR ERVK 302 988 -999 8 1645 8898 18 4 0 chrX 138958130 138959121 -27691175 + RLTR10-int LTR ERVK 990 1984 -3 8 1645 2632 42 13 182 chrX 138959123 138959590 -27690706 + RLTR10 LTR ERVK 1 388 -2 8 1645 258 231 0 0 chrX 138959592 138959657 -27690639 + GA-rich Low_complexity Low_complexity 3 67 0 8 1645 471 219 14 105 chrX 138959659 138959802 -27690494 - B3A SINE B2 -62 136 7 8 1645 1643 219 11 22 chrX 138959970 138960161 -27690135 - ORR1D1 LTR MaLR -5 369 179 8 1645 849 103 0 0 chrX 138960161 138960287 -27690009 + (GA)n Simple_repeat Simple_repeat 1 126 0 8 1645 1643 219 11 22 chrX 138960287 138960464 -27689832 - ORR1D1 LTR MaLR -196 178 6 8 1645 1009 285 67 20 chrX 138960619 138961010 -27689286 - Lx8 LINE L1 -3 5844 5436 8 1645 782 247 11 11 chrX 138961125 138961309 -27688987 - ORR1E LTR MaLR -175 184 1 8 1645 482 155 10 0 chrX 138961369 138961466 -27688830 + GA-rich Low_complexity Low_complexity 1 98 0 8 1645 601 255 122 20 chrX 138961592 138961788 -27688508 + B3 SINE B2 1 216 0 8 1645 230 358 0 0 chrX 138961815 138961896 -27688400 + ID4 SINE ID 3 83 0 8 1645 1013 270 92 38 chrX 138962307 138962653 -27687643 - ORR1D2 LTR MaLR -5 365 1 8 1645 869 164 7 14 chrX 138962753 138962887 -27687409 + B1_Mus2 SINE Alu 1 135 -12 8 1645 468 0 0 0 chrX 138962887 138962939 -27687357 + (CAAAA)n Simple_repeat Simple_repeat 3 54 0 8 1645 869 164 7 14 chrX 138962939 138962952 -27687344 + B1_Mus2 SINE Alu 136 147 0 8 1645 378 265 0 39 chrX 138963096 138963198 -27687098 + RSINE1 SINE B4 33 130 -35 8 1645 560 235 53 0 chrX 138964177 138964309 -27685987 + B1_Mus1 SINE Alu 1 139 -9 8 1645 617 224 3 99 chrX 138964518 138964715 -27685581 + B3A SINE B2 27 198 0 8 1645 830 270 19 5 chrX 138964725 138964930 -27685366 + B3 SINE B2 1 208 -8 8 1645 275 361 105 36 chrX 138964948 138965522 -27684774 + L2a LINE L2 2517 3130 -245 8 1645 243 171 146 0 chrX 138965571 138965653 -27684643 - L1MB7 LINE L1 -24 6160 6067 8 1645 311 291 0 64 chrX 138965710 138965836 -27684460 - L1M5 LINE L1 -439 5735 5617 8 1645 274 367 43 19 chrX 138965942 138966055 -27684241 + L2a LINE L2 3211 3332 -94 8 1645 3300 38 15 2 chrX 138966055 138966449 -27683847 - MTB LTR MaLR 0 400 2 8 1645 274 367 43 19 chrX 138966449 138966546 -27683750 + L2a LINE L2 3333 3425 -1 8 1645 1229 125 15 20 chrX 138968548 138968744 -27681552 + B2_Mm2 SINE B2 1 195 0 8 1645 1145 62 0 0 chrX 138968753 138968897 -27681399 + B1_Mus2 SINE Alu 2 145 -2 8 1645 306 0 0 0 chrX 138969099 138969133 -27681163 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 1645 510 210 56 56 chrX 138969145 138969271 -27681025 - RSINE1 SINE B4 -38 127 2 8 1645 183 42 0 0 chrX 138969714 138969738 -27680558 + (T)n Simple_repeat Simple_repeat 1 24 0 8 1645 21 0 0 0 chrX 138970840 138970861 -27679435 + AT_rich Low_complexity Low_complexity 1 21 0 8 1645 560 246 198 54 chrX 138971142 138971456 -27678840 + ORR1E LTR MaLR 1 359 0 8 1645 273 363 24 0 chrX 138971520 138971644 -27678652 - MIR SINE MIR -87 175 49 8 1645 417 272 22 22 chrX 138971658 138971797 -27678499 + L1MB3 LINE L1 6031 6169 -14 8 1645 1097 72 0 0 chrX 138972630 138972768 -27677528 + B1_Mus1 SINE Alu 1 138 -10 8 1645 324 0 0 0 chrX 138972768 138972804 -27677492 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 8 1645 3491 3 0 0 chrX 138972972 138973355 -27676941 + L1Md_T LINE L1 6200 6582 0 8 1645 281 155 0 17 chrX 138973772 138973831 -27676465 + CT-rich Low_complexity Low_complexity 3 60 0 8 1645 679 136 23 10 chrX 138973885 138974028 -27676268 - B1_Mur3 SINE Alu -1 148 6 8 1645 197 246 135 14 chrX 138974386 138974460 -27675836 - L2 LINE L2 -3166 253 171 8 1645 740 262 0 6 chrX 138974498 138974659 -27675637 + B3A SINE B2 1 160 -38 8 1645 21 0 0 0 chrX 138975183 138975204 -27675092 + AT_rich Low_complexity Low_complexity 1 21 0 8 1645 24 32 0 0 chrX 138975227 138975258 -27675038 + AT_rich Low_complexity Low_complexity 1 31 0 8 1645 374 247 0 0 chrX 138975542 138975615 -27674681 - ID2 SINE ID -9 74 2 8 1645 441 181 0 0 chrX 138975660 138975798 -27674498 + (TG)n Simple_repeat Simple_repeat 2 139 0 8 1645 342 0 0 0 chrX 138975798 138975836 -27674460 + (GA)n Simple_repeat Simple_repeat 1 38 0 8 1645 433 222 71 0 chrX 138976257 138976356 -27673940 - ID_B1 SINE B4 -15 209 104 8 1645 243 237 130 13 chrX 138976290 138976367 -27673929 - PB1D9 SINE Alu -22 98 13 8 1645 31 26 0 0 chrX 138976425 138976463 -27673833 + AT_rich Low_complexity Low_complexity 1 38 0 8 1645 600 14 0 0 chrX 138976491 138976560 -27673736 + (GA)n Simple_repeat Simple_repeat 2 70 0 8 1645 6917 57 56 12 chrX 138976605 138977522 -27672774 - L1_Mus3 LINE L1 -90 6548 5592 8 1645 540 111 0 0 chrX 138977587 138977668 -27672628 + (TTTC)n Simple_repeat Simple_repeat 4 84 0 8 1645 380 229 27 67 chrX 138977747 138977911 -27672385 - L1MD LINE L1 -1255 4891 4740 8 1645 3017 191 48 147 chrX 138978579 138979548 -27670748 + RMER19B LTR ERVK 29 902 0 8 1645 189 0 0 0 chrX 138979591 138979612 -27670684 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 8 1645 423 408 61 45 chrX 138979644 138980070 -27670226 + LTR16B1 LTR ERVL 41 473 -7 8 1645 194 394 22 56 chrX 138980303 138980483 -27669813 + MIR3 SINE MIR 31 204 -4 8 1645 729 192 13 33 chrX 138980546 138980697 -27669599 + B1_Mur1 SINE Alu 2 149 0 8 1645 222 393 20 20 chrX 138981304 138981457 -27668839 + MIRb SINE MIR 97 249 -19 8 1645 204 291 24 60 chrX 138982023 138982107 -27668189 - MER5A DNA MER1_type -28 161 81 8 1645 404 0 0 0 chrX 138982164 138982213 -27668083 + B2_Mm2 SINE B2 49 97 -98 8 1645 2629 110 12 12 chrX 138982216 138982622 -27667674 + Lx LINE L1 6249 6654 0 8 1645 486 29 129 0 chrX 138982734 138982804 -27667492 + B2_Mm2 SINE B2 1 79 -116 8 1645 289 265 98 0 chrX 138982922 138983024 -27667272 + MTEb LTR MaLR 264 375 -4 8 1645 207 0 0 0 chrX 138983120 138983143 -27667153 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 8 1645 526 301 13 19 chrX 138983384 138983543 -27666753 + RSINE1 SINE B4 1 158 -7 8 1645 300 27 0 0 chrX 138983553 138983590 -27666706 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 1645 477 262 146 14 chrX 138983677 138983890 -27666406 - L1MB2 LINE L1 -24 6147 5907 8 1645 230 312 125 0 chrX 138983952 138984048 -27666248 + PB1D10 SINE Alu 5 112 -5 9 1645 679 275 95 0 chrX 138984063 138984263 -27666033 + ID_B1 SINE B4 6 224 0 9 1645 228 175 0 17 chrX 138984272 138984330 -27665966 + A-rich Low_complexity Low_complexity 4 60 0 9 1645 254 337 44 11 chrX 138984334 138984424 -27665872 - B1F1 SINE Alu -55 94 2 9 1645 360 288 127 8 chrX 138984653 138984779 -27665517 - B1F SINE Alu -1 148 8 9 1645 303 336 39 0 chrX 138984864 138984968 -27665328 - MIR SINE MIR -119 143 36 9 1645 552 100 0 0 chrX 138985095 138985175 -27665121 + (TTG)n Simple_repeat Simple_repeat 2 81 0 9 1645 201 133 0 0 chrX 138985275 138985305 -27664991 + (CAAAT)n Simple_repeat Simple_repeat 2 31 0 9 1645 4437 204 53 53 chrX 138985443 138986767 -27663529 + RMER1A Other Other 19 1030 0 9 1645 422 262 65 16 chrX 138987233 138987357 -27662939 + Lx8 LINE L1 5780 5909 -1564 9 1645 717 249 17 109 chrX 138987676 138987770 -27662526 + B4A SINE B4 5 95 -197 9 1645 829 179 14 0 chrX 138987770 138987910 -27662386 + B1_Mur2 SINE Alu 2 143 -6 9 1645 360 0 0 0 chrX 138987919 138987959 -27662337 + (GA)n Simple_repeat Simple_repeat 1 40 0 9 1645 717 249 17 109 chrX 138987959 138988093 -27662203 + B4A SINE B4 96 221 -71 9 1645 378 61 0 0 chrX 138988094 138988143 -27662153 + (CAAGA)n Simple_repeat Simple_repeat 5 53 0 9 1645 835 190 22 0 chrX 138988180 138988317 -27661979 + B1_Mur2 SINE Alu 2 141 -8 9 1645 702 112 8 8 chrX 138988318 138988444 -27661852 - ORR1D1 LTR MaLR -248 126 1 9 1645 228 67 0 0 chrX 138988595 138988625 -27661671 + (A)n Simple_repeat Simple_repeat 1 30 0 9 1645 786 253 76 57 chrX 138989177 138989521 -27660775 - ORR1E LTR MaLR 0 379 1 9 1645 387 270 0 75 chrX 138989720 138989840 -27660456 - PB1D10 SINE Alu 0 117 7 9 1645 423 38 0 0 chrX 138990254 138990307 -27659989 + (GGA)n Simple_repeat Simple_repeat 2 54 0 9 1645 1074 67 0 0 chrX 138990412 138990547 -27659749 + B1_Mus2 SINE Alu 2 136 -11 9 1645 1262 40 0 38 chrX 138990547 138990887 -27659409 + (GAAA)n Simple_repeat Simple_repeat 1 326 0 9 1645 279 0 0 0 chrX 138990889 138990920 -27659376 + (GGAA)n Simple_repeat Simple_repeat 3 33 0 9 1645 1017 168 0 20 chrX 138990922 138991117 -27659179 + B2_Mm2 SINE B2 5 195 0 9 1645 609 128 0 0 chrX 138991117 138991219 -27659077 + (GGGA)n Simple_repeat Simple_repeat 4 105 0 9 1645 471 274 9 9 chrX 138991234 138991341 -27658955 + RSINE1 SINE B4 29 135 -30 9 1645 325 289 124 27 chrX 138991445 138991630 -27658666 - MER46C DNA MER2_type -40 298 96 9 1645 611 250 37 0 chrX 138991664 138991800 -27658496 + B1_Mur1 SINE Alu 1 141 -8 9 1645 321 26 0 0 chrX 138991922 138991960 -27658336 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 9 1645 1160 63 6 0 chrX 138991960 138992118 -27658178 - B2_Mm1a SINE B2 -33 160 2 9 1645 870 140 41 14 chrX 138992521 138992539 -27657757 + B1_Mur4 SINE Alu 1 18 -132 9 1645 387 0 0 0 chrX 138992539 138992582 -27657714 + (CA)n Simple_repeat Simple_repeat 1 43 0 9 1645 870 140 41 14 chrX 138992582 138992708 -27657588 + B1_Mur4 SINE Alu 19 147 -3 9 1645 932 126 21 14 chrX 138992729 138992874 -27657422 + B1_Mus2 SINE Alu 1 146 -1 9 1645 465 66 0 0 chrX 138992959 138993020 -27657276 + (GA)n Simple_repeat Simple_repeat 2 62 0 9 1645 883 154 52 44 chrX 138993055 138993264 -27657032 + RLTR26 LTR ERVK 1 245 -397 9 1645 1005 52 208 0 chrX 138993264 138993455 -27656841 - MERVK26-int LTR ERVK -1498 5421 5191 9 1645 13425 104 49 6 chrX 138993444 138996441 -27653855 - MERVK26-int LTR ERVK -3792 3127 1 9 1645 6890 86 47 15 chrX 138996441 138997381 -27652915 - MERVK26-int LTR ERVK -511 6408 5438 9 1645 23 0 0 0 chrX 138998120 138998143 -27652153 + AT_rich Low_complexity Low_complexity 1 23 0 9 1645 843 122 0 0 chrX 138998167 138998298 -27651998 + (TC)n Simple_repeat Simple_repeat 2 132 0 9 1645 1239 41 0 0 chrX 138998304 138998451 -27651845 - B1_Mus1 SINE Alu 0 148 2 9 1645 253 282 61 61 chrX 138998768 138998900 -27651396 - MLT1A1 LTR MaLR -271 137 6 9 1645 266 328 51 17 chrX 138999429 138999547 -27650749 + L2 LINE L2 2322 2443 -976 9 1645 228 226 108 46 chrX 138999793 138999858 -27650438 + ID4_ SINE ID 1 69 -14 9 1645 183 80 0 0 chrX 138999861 138999886 -27650410 + (CA)n Simple_repeat Simple_repeat 2 26 0 9 1645 301 225 106 53 chrX 139000083 139000177 -27650119 + MLT1F1 LTR MaLR 435 520 -49 1 1645 498 261 0 9 chrX 139000187 139000299 -27649997 + RSINE1 SINE B4 2 112 -53 2 1645 416 261 54 0 chrX 139000355 139000403 -27649893 + PB1D9 SINE Alu 2 49 -71 3 1645 234 62 0 0 chrX 139000403 139000435 -27649861 + (TGG)n Simple_repeat Simple_repeat 2 33 0 4 1645 416 261 54 0 chrX 139000435 139000497 -27649799 + PB1D9 SINE Alu 50 116 -4 3 1645 440 177 13 0 chrX 139001093 139001172 -27649124 + PB1D10 SINE Alu 33 112 -5 5 1645 682 177 28 7 chrX 139001349 139001491 -27648805 - B1_Mur3 SINE Alu 0 149 5 6 1645 353 303 84 12 chrX 139002753 139002920 -27647376 + MIRb SINE MIR 54 232 -36 7 1645 580 251 47 17 chrX 139002946 139003118 -27647178 + B3A SINE B2 1 178 -20 8 1645 246 242 0 31 chrX 139003280 139003344 -27646952 - L1_Mur3 LINE L1 -811 5066 5005 9 1645 417 39 0 0 chrX 139003347 139003398 -27646898 + (TTCTCC)n Simple_repeat Simple_repeat 5 55 0 1 1645 1205 61 0 0 chrX 139003398 139003546 -27646750 - B1_Mus1 SINE Alu 0 148 1 1 1645 3960 159 50 11 chrX 139003546 139004253 -27646043 - L1_Mur3 LINE L1 -858 5022 4288 9 1645 441 0 0 0 chrX 139004253 139004302 -27645994 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 1645 3960 159 50 11 chrX 139004302 139004331 -27645965 - L1_Mur3 LINE L1 -1593 4287 4258 9 1645 236 273 35 115 chrX 139004564 139004651 -27645645 + ID4_ SINE ID 2 81 -2 1 1645 794 78 0 8 chrX 139004690 139004819 -27645477 + (GAAA)n Simple_repeat Simple_repeat 1 128 0 1 1645 1161 114 11 38 chrX 139004843 139005026 -27645270 + B2_Mm1t SINE B2 2 179 -14 1 1645 2738 19 56 0 chrX 139005031 139005353 -27644943 - L1Md_F3 LINE L1 -19 6565 6226 1 1645 181 371 0 0 chrX 139005450 139005512 -27644784 - L4 LINE RTE -202 1827 1766 1 1645 506 264 27 14 chrX 139005851 139005997 -27644299 + MIR SINE MIR 115 262 0 1 1645 295 294 181 5 chrX 139006138 139006343 -27643953 + L2a LINE L2 3106 3346 -80 1 1645 364 254 32 21 chrX 139006437 139006556 -27643740 + Lx7 LINE L1 7108 7234 -239 2 1645 625 251 30 6 chrX 139007102 139007266 -27643030 - B3 SINE B2 -11 205 38 2 1645 283 282 64 36 chrX 139007311 139007462 -27642834 - MIR SINE MIR -88 180 23 2 1645 957 184 20 55 chrX 139007482 139007683 -27642613 - B3A SINE B2 -1 197 4 2 1645 201 39 0 0 chrX 139007690 139007716 -27642580 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 1645 748 222 0 7 chrX 139007735 139007880 -27642416 + B1F2 SINE Alu 6 149 0 2 1645 445 154 104 19 chrX 139008506 139008612 -27641684 + PB1D9 SINE Alu 6 120 0 2 1645 922 198 56 5 chrX 139008627 139008825 -27641471 - B3 SINE B2 0 216 9 2 1645 915 306 27 19 chrX 139008876 139009302 -27640994 + L1MA6 LINE L1 5837 6276 -24 2 1645 378 344 51 41 chrX 139009420 139009714 -27640582 + MER102b DNA MER1_type 26 322 -19 2 1645 806 270 56 14 chrX 139010058 139010272 -27640024 + ID_B1 SINE B4 2 224 0 3 1645 23 54 0 0 chrX 139010565 139010602 -27639694 + AT_rich Low_complexity Low_complexity 1 37 0 3 1645 261 0 0 0 chrX 139011022 139011051 -27639245 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1645 243 61 0 0 chrX 139011283 139011316 -27638980 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 3 1645 387 0 0 0 chrX 139011333 139011376 -27638920 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1645 378 192 14 0 chrX 139011443 139011516 -27638780 - PB1D9 SINE Alu -6 114 41 3 1645 357 248 6 161 chrX 139011532 139011597 -27638699 - B1_Mur1 SINE Alu -7 142 89 3 1645 234 0 0 0 chrX 139011597 139011623 -27638673 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 3 1645 357 248 6 161 chrX 139011623 139011725 -27638571 - B1_Mur1 SINE Alu -61 88 1 3 1645 581 297 125 0 chrX 139011742 139011934 -27638362 - B4A SINE B4 -76 216 1 3 1645 246 296 89 59 chrX 139013065 139013183 -27637113 - MIRb SINE MIR -13 255 135 3 1645 1599 6 0 0 chrX 139013183 139013363 -27636933 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 1645 246 296 89 59 chrX 139013363 139013413 -27636883 - MIRb SINE MIR -134 134 82 3 1645 333 325 55 83 chrX 139013486 139013704 -27636592 - MLT1G LTR MaLR 0 595 384 4 1645 409 218 0 127 chrX 139013843 139013865 -27636431 + MT2B LTR ERVL 148 153 -448 4 1645 835 168 0 63 chrX 139013865 139014024 -27636272 + B1_Mur3 SINE Alu 1 149 0 4 1645 629 190 0 8 chrX 139014736 139014858 -27635438 + B1_Mur1 SINE Alu 21 141 -8 4 1645 225 94 0 0 chrX 139014867 139014899 -27635397 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 4 1645 512 301 22 8 chrX 139014931 139015065 -27635231 + B1F1 SINE Alu 6 141 -8 4 1645 427 70 42 0 chrX 139015065 139015136 -27635160 + (GGAAA)n Simple_repeat Simple_repeat 1 74 0 4 1645 966 73 0 0 chrX 139015171 139015308 -27634988 + B1_Mm SINE Alu 9 145 -2 4 1645 201 132 0 50 chrX 139015309 139015349 -27634947 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 4 1645 254 361 65 0 chrX 139015509 139015617 -27634679 + MLT1H2 LTR MaLR 72 186 -303 5 1645 469 303 35 63 chrX 139015842 139016096 -27634200 - L2 LINE L2 -698 2721 2475 5 1645 273 293 53 0 chrX 139016131 139016206 -27634090 + ID4_ SINE ID 5 83 0 5 1645 518 301 120 30 chrX 139016774 139016931 -27633365 + MLT1I LTR MaLR 52 220 -191 5 1645 1474 59 43 0 chrX 139016931 139017118 -27633178 - B2_Mm2 SINE B2 0 195 1 5 1645 518 301 120 30 chrX 139017118 139017227 -27633069 + MLT1I LTR MaLR 221 341 -70 5 1645 642 125 0 0 chrX 139017595 139017691 -27632605 + PB1D9 SINE Alu 24 119 -1 5 1645 1207 49 0 0 chrX 139017723 139017867 -27632429 + B1_Mus2 SINE Alu 4 147 0 5 1645 216 0 0 0 chrX 139018687 139018711 -27631585 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1645 625 164 153 23 chrX 139018721 139018852 -27631444 - B1_Mus1 SINE Alu 0 148 1 5 1645 611 309 17 30 chrX 139018852 139019082 -27631214 - B4A SINE B4 -64 228 2 5 1645 185 139 111 44 chrX 139019897 139019942 -27630354 + MIRb SINE MIR 65 112 -156 6 1645 205 274 167 10 chrX 139020530 139020626 -27629670 + MIRb SINE MIR 124 234 -28 6 1645 328 308 98 43 chrX 139020871 139021034 -27629262 + Charlie8 DNA MER1_type 31 202 -2226 6 1645 1210 41 7 0 chrX 139021187 139021332 -27628964 - B1_Mus1 SINE Alu 0 148 3 6 1645 703 203 0 42 chrX 139021692 139021703 -27628593 - B1_Mus2 SINE Alu 0 147 139 6 1645 366 23 0 0 chrX 139021703 139021746 -27628550 + (GTTTG)n Simple_repeat Simple_repeat 2 44 0 6 1645 703 203 0 42 chrX 139021746 139021878 -27628418 - B1_Mus2 SINE Alu -9 138 10 6 1645 274 238 0 16 chrX 139021888 139021952 -27628344 + MLT1A1 LTR MaLR 344 406 -2 6 1645 636 241 0 22 chrX 139022473 139022609 -27627687 + B1_Mur1 SINE Alu 3 135 -14 6 1645 4372 48 0 9 chrX 139022784 139023342 -27626954 - L1Md_F2 LINE L1 0 6582 6044 6 1645 769 160 13 34 chrX 139023628 139023777 -27626519 + B1_Mur3 SINE Alu 4 149 0 6 1645 3474 105 112 14 chrX 139023783 139023867 -27626429 - Lx3B LINE L1 -782 6191 6086 7 1645 351 44 0 0 chrX 139023867 139023912 -27626384 + (CCCCCT)n Simple_repeat Simple_repeat 3 47 0 7 1645 3474 105 112 14 chrX 139023912 139024046 -27626250 - Lx3B LINE L1 -888 6085 5916 7 1645 764 88 0 9 chrX 139024046 139024161 -27626135 + (TTCC)n Simple_repeat Simple_repeat 3 116 0 7 1645 1067 134 0 6 chrX 139024161 139024341 -27625955 + (TCC)n Simple_repeat Simple_repeat 2 180 0 7 1645 3793 95 7 1 chrX 139024341 139024871 -27625425 - Lx3B LINE L1 -1058 5915 5390 7 1645 5565 84 4 9 chrX 139024873 139025640 -27624656 + Lx3A LINE L1 6204 6966 -15 7 1645 594 0 0 0 chrX 139025640 139025706 -27624590 + (GAAA)n Simple_repeat Simple_repeat 1 66 0 7 1645 336 232 73 0 chrX 139025716 139025798 -27624498 + RSINE1 SINE B4 12 99 -66 7 1645 797 87 150 0 chrX 139025798 139025925 -27624371 + B1_Mus1 SINE Alu 2 147 -1 7 1645 826 112 0 47 chrX 139025926 139026095 -27624201 + A-rich Low_complexity Low_complexity 5 165 0 7 1645 247 303 0 0 chrX 139026098 139026164 -27624132 + RSINE1 SINE B4 89 154 -11 7 1645 267 79 0 0 chrX 139026164 139026202 -27624094 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1645 22 70 0 0 chrX 139026206 139026249 -27624047 + AT_rich Low_complexity Low_complexity 1 43 0 8 1645 365 339 11 60 chrX 139026323 139026381 -27623915 + ID_B1 SINE B4 41 216 -8 8 1645 638 194 0 24 chrX 139026381 139026508 -27623788 + B1_Mur1 SINE Alu 18 141 -8 8 1645 547 279 27 13 chrX 139026515 139026664 -27623632 + RSINE1 SINE B4 3 153 -12 8 1645 23 0 0 0 chrX 139026680 139026703 -27623593 + AT_rich Low_complexity Low_complexity 1 23 0 8 1645 230 61 0 0 chrX 139027101 139027134 -27623162 - RLTR10E LTR ERVK -268 43 11 8 1645 365 109 0 0 chrX 139027130 139027185 -27623111 + RLTR10E LTR ERVK 257 311 0 8 1645 544 338 45 78 chrX 139027381 139027689 -27622607 - MLT1F2 LTR MaLR -6 554 257 8 1645 378 0 0 0 chrX 139027784 139027826 -27622470 + (GA)n Simple_repeat Simple_repeat 2 43 0 8 1645 709 211 189 27 chrX 139027979 139028164 -27622132 + B3 SINE B2 2 216 0 8 1645 1550 32 0 26 chrX 139028171 139028361 -27621935 - B2_Mm2 SINE B2 -9 186 2 9 1645 297 329 46 52 chrX 139028378 139028551 -27621745 + B3A SINE B2 27 198 0 9 1645 2038 103 20 3 chrX 139029008 139029301 -27620995 + Lx4A LINE L1 6760 7057 -1 9 1645 24 0 0 0 chrX 139029302 139029326 -27620970 + AT_rich Low_complexity Low_complexity 1 24 0 9 1645 827 224 125 0 chrX 139029372 139029564 -27620732 + B3 SINE B2 1 216 0 9 1645 488 374 68 36 chrX 139029971 139030415 -27619881 - MLT1J LTR MaLR -18 494 37 9 1645 420 260 173 13 chrX 139030606 139030762 -27619534 + B3 SINE B2 35 215 -1 9 1645 366 207 111 0 chrX 139030873 139030974 -27619322 + PB1D10 SINE Alu 1 111 -6 9 1645 181 180 20 20 chrX 139030974 139031025 -27619271 + GA-rich Low_complexity Low_complexity 3 53 0 9 1645 292 252 60 10 chrX 139031076 139031176 -27619120 - MIR SINE MIR -66 196 92 9 1645 981 206 73 41 chrX 139031495 139031713 -27618583 + URR1B DNA MER1_type 1 225 0 1 1645 309 251 105 37 chrX 139031782 139031972 -27618324 - L1MC5 LINE L1 -76 7885 7683 1 1645 526 198 0 0 chrX 139031979 139032075 -27618221 + PB1D10 SINE Alu 7 102 -15 1 1645 889 170 0 33 chrX 139032136 139032288 -27618008 + B1_Mus2 SINE Alu 1 147 0 1 1645 276 30 0 0 chrX 139032288 139032321 -27617975 + (TAAAAA)n Simple_repeat Simple_repeat 2 34 0 1 1645 350 327 119 0 chrX 139032960 139033128 -27617168 - MLT1N2 LTR MaLR 0 562 375 1 1645 560 259 22 39 chrX 139033408 139033589 -27616707 + B3A SINE B2 5 182 -16 1 1645 462 243 84 0 chrX 139034099 139034206 -27616090 + RSINE1 SINE B4 10 125 -40 1 1645 279 315 137 47 chrX 139034936 139035126 -27615170 + LTR16A LTR ERVL 161 367 -84 1 1645 789 170 0 39 chrX 139035190 139035343 -27614953 - B1_Mur3 SINE Alu -1 148 2 1 1645 544 326 54 42 chrX 139035623 139035909 -27614387 - MLT1F2 LTR MaLR -42 506 195 1 1645 611 250 0 9 chrX 139036234 139036384 -27613912 + B1_Mur2 SINE Alu 1 148 -1 1 1645 28 48 0 0 chrX 139036471 139036513 -27613783 + AT_rich Low_complexity Low_complexity 1 42 0 1 1645 783 196 0 65 chrX 139036514 139036667 -27613629 - B1_Mur1 SINE Alu -5 144 2 1 1645 726 274 22 20 chrX 139036713 139037085 -27613211 + L1M2 LINE L1 5096 5445 -402 1 1645 699 175 0 25 chrX 139037309 139037457 -27612839 + B1_Mus2 SINE Alu 1 135 -13 1 1645 444 19 0 0 chrX 139037457 139037510 -27612786 + (TAAA)n Simple_repeat Simple_repeat 4 56 0 1 1645 328 194 69 0 chrX 139037880 139037952 -27612344 + B1_Mus2 SINE Alu 71 147 0 1 1645 820 275 4 21 chrX 139038234 139038475 -27611821 - Lx7 LINE L1 -1293 6403 6167 1 1645 1504 60 0 5 chrX 139038619 139038804 -27611492 - B2_Mm2 SINE B2 -9 186 3 1 1645 215 212 45 45 chrX 139038804 139038860 -27611436 + T-rich Low_complexity Low_complexity 34 91 0 1 1645 192 77 0 0 chrX 139038860 139038886 -27611410 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 1645 215 212 45 45 chrX 139038886 139038918 -27611378 + T-rich Low_complexity Low_complexity 3 33 0 1 1645 468 150 0 0 chrX 139038918 139038998 -27611298 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 1645 25 31 0 0 chrX 139039046 139039078 -27611218 + AT_rich Low_complexity Low_complexity 1 32 0 1 1645 936 241 5 5 chrX 139039253 139039445 -27610851 + ID_B1 SINE B4 2 193 -31 1 1645 339 181 0 0 chrX 139039463 139039535 -27610761 + (CA)n Simple_repeat Simple_repeat 2 73 0 1 1645 188 0 74 0 chrX 139040099 139040126 -27610170 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1645 475 253 0 0 chrX 139040240 139040331 -27609965 + PB1D7 SINE Alu 24 114 -6 1 1645 879 275 95 34 chrX 139042407 139042764 -27607532 - MTEa LTR MaLR 0 379 1 1 1645 1423 169 101 11 chrX 139042995 139043282 -27607014 + MTC LTR MaLR 1 313 -108 1 1645 252 0 0 0 chrX 139043925 139043953 -27606343 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 1645 261 0 0 0 chrX 139043953 139043981 -27606315 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1645 285 29 0 0 chrX 139044456 139044490 -27605806 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1645 674 287 56 19 chrX 139044879 139045092 -27605204 + ID_B1 SINE B4 2 222 -2 1 1645 211 211 0 0 chrX 139045293 139045331 -27604965 + T-rich Low_complexity Low_complexity 2 39 0 1 1645 441 0 0 0 chrX 139046086 139046135 -27604161 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1645 355 331 23 53 chrX 139046135 139046266 -27604030 - B3A SINE B2 -9 189 63 1 1645 251 288 92 46 chrX 139046666 139046819 -27603477 - MER117 DNA MER1_type -34 163 4 1 1645 482 184 6 0 chrX 139047302 139047476 -27602820 + (CA)n Simple_repeat Simple_repeat 2 176 0 1 1645 219 36 0 0 chrX 139047494 139047522 -27602774 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1645 283 300 25 12 chrX 139048673 139048754 -27601542 - ID4_ SINE ID -1 82 1 1 1645 1258 27 7 0 chrX 139048911 139049057 -27601239 + B1_Mus2 SINE Alu 1 147 0 1 1645 186 71 0 0 chrX 139049059 139049087 -27601209 + (CTAAA)n Simple_repeat Simple_repeat 3 30 0 1 1645 1160 70 0 0 chrX 139049225 139049382 -27600914 + B2_Mm2 SINE B2 2 158 -37 1 1645 207 0 0 0 chrX 139049383 139049406 -27600890 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 1 1645 446 270 106 41 chrX 139049499 139049669 -27600627 - B3A SINE B2 -17 181 1 1 1645 332 109 0 18 chrX 139049696 139049752 -27600544 + B1F1 SINE Alu 95 149 0 1 1645 995 222 39 5 chrX 139049826 139050034 -27600262 - B3 SINE B2 0 216 2 1 1645 1633 157 85 12 chrX 139050116 139050457 -27599839 - ORR1D1 LTR MaLR -8 366 1 1 1645 727 202 133 12 chrX 139050457 139050622 -27599674 - B3 SINE B2 -31 185 1 1 1645 440 77 0 15 chrX 139051289 139051355 -27598941 + (TTTTC)n Simple_repeat Simple_repeat 4 68 0 1 1645 1043 27 0 169 chrX 139051355 139051532 -27598764 - B1_Mm SINE Alu 0 147 1 1 1645 237 349 14 87 chrX 139051605 139051743 -27598553 + MER58A DNA MER1_type 19 146 -78 1 1645 335 335 49 6 chrX 139051914 139052076 -27598220 - MIR SINE MIR -10 252 84 1 1645 226 375 0 0 chrX 139052106 139052170 -27598126 + B4A SINE B4 89 152 -140 1 1645 252 330 66 0 chrX 139052121 139052212 -27598084 + PB1D9 SINE Alu 19 115 -5 1 1645 462 220 0 9 chrX 139052230 139052340 -27597956 + ID_B1 SINE B4 116 224 0 1 1645 1022 117 23 0 chrX 139052554 139052725 -27597571 - URR1B DNA MER1_type -5 220 46 1 1645 237 98 0 0 chrX 139053628 139053669 -27596627 + (CAAAC)n Simple_repeat Simple_repeat 1 41 0 1 1645 226 274 64 106 chrX 139053825 139053919 -27596377 + MIR SINE MIR 2 91 -171 1 1645 687 247 76 57 chrX 139054068 139054278 -27596018 - B3 SINE B2 -2 214 1 1 1645 738 220 113 0 chrX 139054632 139054800 -27595496 + ID_B1 SINE B4 7 193 -31 1 1645 1831 172 39 22 chrX 139054800 139055162 -27595134 + ORR1D1 LTR MaLR 1 368 -6 1 1645 1490 54 21 0 chrX 139055162 139055348 -27594948 + B2_Mm1a SINE B2 1 190 -3 1 1645 575 268 14 21 chrX 139055779 139055924 -27594372 + B1_Mur2 SINE Alu 3 146 -3 1 1645 236 371 42 14 chrX 139056255 139056397 -27593899 - MIR3 SINE MIR -62 146 1 1 1645 1167 61 0 7 chrX 139056503 139056651 -27593645 + B1_Mus2 SINE Alu 1 147 0 1 1645 199 71 48 0 chrX 139056651 139056693 -27593603 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 1 1645 232 185 185 0 chrX 139056753 139056807 -27593489 + ID4_ SINE ID 1 64 -19 1 1645 369 247 271 0 chrX 139056807 139056914 -27593382 + ID_B1 SINE B4 1 204 -20 1 1645 573 15 0 0 chrX 139056921 139056987 -27593309 + (TC)n Simple_repeat Simple_repeat 1 66 0 1 1645 308 140 0 0 chrX 139057754 139057804 -27592492 - MTD LTR MaLR -344 75 26 1 1645 912 126 0 0 chrX 139057821 139057972 -27592324 + (GAAA)n Simple_repeat Simple_repeat 2 152 0 1 1645 436 198 9 143 chrX 139058052 139058164 -27592132 - ID_B1 SINE B4 -47 177 81 1 1645 233 190 67 33 chrX 139058260 139058320 -27591976 - L1M7 LINE L1 -4751 1467 1406 1 1645 326 250 101 70 chrX 139058766 139058895 -27591401 + MER5A DNA MER1_type 7 139 -50 1 1645 508 254 134 17 chrX 139058981 139059153 -27591143 - ID_B1 SINE B4 -1 223 32 1 1645 211 304 0 0 chrX 139059241 139059287 -27591009 - MIRb SINE MIR -15 253 208 1 1645 825 230 30 103 chrX 139060457 139060690 -27589606 + B3 SINE B2 1 216 0 1 1645 915 148 0 0 chrX 139060709 139060851 -27589445 - B1_Mus2 SINE Alu -1 146 5 1 1645 189 107 0 0 chrX 139061097 139061125 -27589171 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1645 376 256 67 67 chrX 139061234 139061312 -27588984 + MLT1J LTR MaLR 28 106 -406 1 1645 1432 63 0 0 chrX 139061312 139061487 -27588809 + B2_Mm1a SINE B2 1 175 -18 1 1645 376 256 67 67 chrX 139061487 139061542 -27588754 + MLT1J LTR MaLR 107 161 -351 1 1645 267 298 73 37 chrX 139061591 139061727 -27588569 - B1F SINE Alu -8 141 1 1 1645 794 191 237 0 chrX 139061744 139061917 -27588379 - B3 SINE B2 0 216 3 1 1645 606 140 0 0 chrX 139061924 139062024 -27588272 + (TCC)n Simple_repeat Simple_repeat 2 101 0 1 1645 21 0 0 0 chrX 139062024 139062045 -27588251 + AT_rich Low_complexity Low_complexity 1 21 0 1 1645 583 273 93 0 chrX 139062396 139062590 -27587706 - ID_B1 SINE B4 -10 214 3 1 1645 640 246 79 74 chrX 139063204 139063375 -27586921 - B3 SINE B2 0 216 42 1 1645 189 0 0 0 chrX 139063375 139063396 -27586900 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1645 1036 87 0 0 chrX 139063396 139063534 -27586762 - B1_Mus1 SINE Alu -9 139 2 1 1645 640 246 79 74 chrX 139063534 139063576 -27586720 - B3 SINE B2 -175 41 2 1 1645 648 274 25 34 chrX 139063654 139063858 -27586438 + MIRb SINE MIR 59 260 -8 1 1645 792 252 81 48 chrX 139064805 139065114 -27585182 - MTD LTR MaLR 0 419 101 1 1645 410 208 65 9 chrX 139065134 139065241 -27585055 + B1_Mus2 SINE Alu 22 134 -13 1 1645 189 237 0 0 chrX 139066920 139066979 -27583317 + CT-rich Low_complexity Low_complexity 2 60 0 1 1646 224 111 22 0 chrX 139067769 139067814 -27582482 + (CGGG)n Simple_repeat Simple_repeat 2 47 0 1 1646 207 179 0 0 chrX 139067859 139067898 -27582398 + GA-rich Low_complexity Low_complexity 2 40 0 1 1646 2346 180 45 6 chrX 139067953 139068423 -27581873 - RMER5 LTR ERV1 -46 488 1 1 1646 228 67 0 0 chrX 139068606 139068636 -27581660 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 1 1646 423 0 0 0 chrX 139068643 139068690 -27581606 + (AAATG)n Simple_repeat Simple_repeat 2 48 0 1 1646 384 119 0 0 chrX 139068736 139068795 -27581501 + (T)n Simple_repeat Simple_repeat 1 59 0 2 1646 1222 48 0 0 chrX 139068805 139068952 -27581344 - B1_Mus1 SINE Alu 0 148 2 2 1646 498 269 18 18 chrX 139069543 139069713 -27580583 - L1MA4 LINE L1 -233 5947 5778 2 1646 541 263 42 5 chrX 139069715 139069926 -27580370 - L1ME1 LINE L1 -219 5954 5736 2 1646 236 200 18 0 chrX 139069944 139069999 -27580297 + MLT1E3 LTR MaLR 76 131 -493 2 1646 231 229 71 0 chrX 139069999 139070013 -27580283 + MLT2C2 LTR ERVL 55 128 -336 2 1646 394 282 68 8 chrX 139070019 139070137 -27580159 - ID_B1 SINE B4 -21 203 79 2 1646 360 111 0 0 chrX 139070144 139070198 -27580098 + (TTC)n Simple_repeat Simple_repeat 2 55 0 2 1646 1188 48 12 23 chrX 139070219 139070390 -27579906 - B2_Mm2 SINE B2 -26 169 1 2 1646 390 250 136 23 chrX 139070495 139070671 -27579625 - L1ME1 LINE L1 -671 5773 5578 2 1646 28 29 0 0 chrX 139070753 139070788 -27579508 + AT_rich Low_complexity Low_complexity 1 35 0 2 1646 292 216 134 0 chrX 139070903 139071000 -27579296 - Lx5 LINE L1 -5 7045 6936 2 1646 414 270 34 17 chrX 139071027 139071144 -27579152 - PB1D7 SINE Alu -1 119 1 2 1646 1014 281 79 40 chrX 139071156 139071750 -27578546 - L1MDa LINE L1 -3073 3464 2848 2 1646 622 242 95 48 chrX 139071756 139071827 -27578469 - L1MDa LINE L1 -5142 1491 1423 2 1646 423 0 0 0 chrX 139071827 139071874 -27578422 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1646 622 242 95 48 chrX 139071874 139072118 -27578178 - L1MDa LINE L1 -5211 1422 1161 2 1646 1972 211 132 17 chrX 139072158 139072675 -27577621 - Lx9 LINE L1 0 7644 7069 2 1646 950 363 137 41 chrX 139072663 139073719 -27576577 - L1MDa LINE L1 -5467 1166 9 2 1646 1206 216 123 25 chrX 139073704 139074166 -27576130 - L1MEc LINE L1 -4574 1765 1144 2 1646 503 256 16 8 chrX 139074166 139074292 -27576004 + MLT1F2 LTR MaLR 1 127 -433 2 1646 287 318 0 12 chrX 139074314 139074400 -27575896 + MLT1F2 LTR MaLR 239 323 -237 2 1646 1082 108 71 6 chrX 139074458 139074626 -27575670 + B2_Mm2 SINE B2 3 181 -14 2 1646 1090 68 0 0 chrX 139074627 139074774 -27575522 + B1_Mus1 SINE Alu 2 148 0 2 1646 1465 84 5 0 chrX 139074879 139075070 -27575226 - B2_Mm1t SINE B2 0 193 2 2 1646 1211 184 14 10 chrX 139075315 139075524 -27574772 - L1VL2 LINE L1 -5931 404 195 2 1646 380 286 104 28 chrX 139075524 139075668 -27574628 - ID_B1 SINE B4 -67 157 3 2 1646 892 331 65 40 chrX 139075764 139076184 -27574112 + MT2A LTR ERVL 1 430 -103 2 1646 1332 232 101 3 chrX 139076184 139076521 -27573775 + ORR1D2 LTR MaLR 1 370 0 2 1646 892 331 65 40 chrX 139076521 139076620 -27573676 + MT2A LTR ERVL 431 533 0 2 1646 462 308 8 0 chrX 139076621 139076741 -27573555 + B1F2 SINE Alu 13 133 -16 2 1646 902 58 0 8 chrX 139076762 139076884 -27573412 + (GAAA)n Simple_repeat Simple_repeat 4 124 0 2 1646 875 52 0 0 chrX 139076971 139077086 -27573210 + B2_Mm2 SINE B2 2 116 -79 2 1646 241 362 18 41 chrX 139077094 139077264 -27573032 + MLT1F2-int LTR MaLR 622 787 -702 2 1646 4825 66 5 0 chrX 139077264 139078066 -27572230 + L1_Mus2 LINE L1 5199 6007 -559 2 1646 227 317 17 0 chrX 139078067 139078127 -27572169 + MER20 DNA MER1_type 143 203 -16 2 1646 1069 131 118 102 chrX 139078275 139078530 -27571766 + ORR1A3 LTR MaLR 1 259 -67 2 1646 4001 141 12 21 chrX 139078530 139079203 -27571093 + Lx LINE L1 5988 6654 0 2 1646 970 206 9 29 chrX 139079234 139079444 -27570852 + B3 SINE B2 2 207 -9 2 1646 324 64 0 0 chrX 139079626 139079673 -27570623 + (T)n Simple_repeat Simple_repeat 1 47 0 2 1646 694 325 137 52 chrX 139079679 139080124 -27570172 + MLT1F2-int LTR MaLR 1007 1489 0 2 1646 252 302 20 40 chrX 139080137 139080237 -27570059 + MLT1F2 LTR MaLR 42 139 -421 2 1646 820 176 0 0 chrX 139080237 139080373 -27569923 + B1_Mur1 SINE Alu 1 136 -13 2 1646 708 12 0 0 chrX 139080374 139080455 -27569841 + (GAAA)n Simple_repeat Simple_repeat 1 81 0 2 1646 214 135 0 55 chrX 139080463 139080518 -27569778 + A-rich Low_complexity Low_complexity 1 52 0 2 1646 546 16 0 0 chrX 139080566 139080629 -27569667 + (TC)n Simple_repeat Simple_repeat 1 63 0 2 1646 619 335 14 52 chrX 139080631 139080921 -27569375 + MLT1F2 LTR MaLR 211 489 -71 2 1646 269 328 31 31 chrX 139080935 139081064 -27569232 + ID_B1 SINE B4 87 215 -9 2 1646 855 73 0 0 chrX 139081080 139081189 -27569107 - L1_Mus2 LINE L1 -329 6237 6129 2 1646 246 55 0 0 chrX 139081179 139081222 -27569074 + L1_Mus2 LINE L1 6529 6566 0 2 1646 648 302 105 34 chrX 139081324 139081762 -27568534 - L1M2 LINE L1 -2404 4441 3973 2 1646 728 221 39 0 chrX 139081906 139082031 -27568265 - B3A SINE B2 -36 162 32 2 1646 2483 174 0 56 chrX 139082031 139082080 -27568216 + MTC LTR MaLR 2 46 -375 2 1646 1129 115 60 6 chrX 139082080 139082263 -27568033 + B2_Mm2 SINE B2 1 193 -2 2 1646 2483 174 0 56 chrX 139082263 139082657 -27567639 + MTC LTR MaLR 47 420 -1 2 1646 728 221 39 0 chrX 139082657 139082685 -27567611 - B3A SINE B2 -167 31 4 2 1646 850 287 73 45 chrX 139082694 139083763 -27566533 - L1M2 LINE L1 -3534 3311 2281 2 1646 417 296 15 101 chrX 139083860 139084059 -27566237 + B4A SINE B4 107 288 -4 2 1646 852 10 0 0 chrX 139084169 139084266 -27566030 + (TC)n Simple_repeat Simple_repeat 1 97 0 2 1646 912 129 14 0 chrX 139084325 139084464 -27565832 + B1_Mus1 SINE Alu 1 141 -7 2 1646 417 39 0 0 chrX 139084468 139084519 -27565777 + (CTA)n Simple_repeat Simple_repeat 3 53 0 2 1646 944 137 203 0 chrX 139085440 139085622 -27564674 + URR1A DNA MER1_type 5 223 -3 2 1646 29 0 0 0 chrX 139086027 139086056 -27564240 + AT_rich Low_complexity Low_complexity 1 29 0 2 1646 317 292 11 0 chrX 139086167 139086256 -27564040 - L1MD3 LINE L1 -1417 6578 6489 2 1646 225 304 14 55 chrX 139086574 139086647 -27563649 - B4 SINE B4 -1 291 222 2 1646 611 319 22 16 chrX 139086709 139086891 -27563405 - B4 SINE B4 -101 191 9 2 1646 545 224 122 56 chrX 139086947 139087127 -27563169 - B3A SINE B2 -2 196 5 2 1646 261 213 0 0 chrX 139087276 139087323 -27562973 + ID4_ SINE ID 5 51 -32 2 1646 628 235 274 4 chrX 139087778 139088056 -27562240 + L1MB7 LINE L1 5320 5672 -502 2 1646 561 210 287 0 chrX 139088065 139088222 -27562074 + B3 SINE B2 15 216 0 2 1646 4504 67 0 0 chrX 139088372 139089000 -27561296 - L1_Mus2 LINE L1 -425 6141 5514 2 1646 2816 74 11 112 chrX 139089000 139089456 -27560840 + L1_Mus2 LINE L1 6156 6565 -1 2 1646 352 291 77 16 chrX 139089475 139089657 -27560639 + L1MB7 LINE L1 5761 5953 -231 2 1646 752 233 179 10 chrX 139090196 139090505 -27559791 - MTEb LTR MaLR -14 365 3 2 1646 790 208 0 14 chrX 139090735 139090881 -27559415 + B1_Mur4 SINE Alu 2 145 -5 2 1646 432 0 0 0 chrX 139091031 139091079 -27559217 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1646 283 316 68 0 chrX 139091307 139091440 -27558856 - MIR SINE MIR -10 252 111 2 1646 644 230 115 0 chrX 139092293 139092441 -27557855 + B3 SINE B2 3 167 -49 2 1646 225 266 191 0 chrX 139092713 139092807 -27557489 + MER5A1 DNA MER1_type 14 125 -41 2 1646 452 290 38 0 chrX 139092883 139093014 -27557282 + ID_B1 SINE B4 82 217 -7 2 1646 396 0 0 0 chrX 139093730 139093774 -27556522 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 2 1646 318 270 34 0 chrX 139094144 139094233 -27556063 + RSINE1 SINE B4 41 132 -33 2 1646 543 31 0 0 chrX 139094251 139094316 -27555980 + (TG)n Simple_repeat Simple_repeat 2 66 0 2 1646 470 318 91 7 chrX 139094320 139094596 -27555700 - L2 LINE L2 -1320 2099 1801 2 1646 21 36 0 0 chrX 139094626 139094654 -27555642 + AT_rich Low_complexity Low_complexity 1 28 0 2 1646 236 210 274 0 chrX 139094674 139094736 -27555560 - ID2 SINE ID -1 82 4 2 1646 237 311 178 9 chrX 139094837 139094944 -27555352 + PB1 SINE Alu 2 126 -1 2 1646 2622 169 11 50 chrX 139095517 139095785 -27554511 - L1_Mur3 LINE L1 -458 5422 5154 2 1646 898 31 15 30 chrX 139095785 139095917 -27554379 + L1Md_F3 LINE L1 6455 6584 0 2 1646 2622 169 11 50 chrX 139095917 139095975 -27554321 - L1_Mur3 LINE L1 -727 5153 5115 2 1646 4141 80 36 2 chrX 139095975 139096528 -27553768 - Lx LINE L1 -7 6647 6076 2 1646 2622 169 11 50 chrX 139096528 139096742 -27553554 - L1_Mur3 LINE L1 -766 5114 4902 2 1646 3554 153 14 19 chrX 139096741 139097135 -27553161 + Lx5 LINE L1 5398 5796 -1254 2 1646 842 92 224 19 chrX 139097135 139097291 -27553005 + B2_Mm2 SINE B2 2 189 -6 2 1646 3554 211 64 26 chrX 139097291 139097982 -27552314 + Lx5 LINE L1 5797 6477 -581 2 1646 225 0 0 0 chrX 139097982 139098007 -27552289 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 1646 3210 255 54 38 chrX 139098007 139098617 -27551679 + Lx5 LINE L1 6478 7434 -26 2 1646 632 247 17 40 chrX 139098654 139098827 -27551469 - RMER15 LTR ERVL -101 474 306 2 1646 905 283 26 97 chrX 139099496 139099876 -27550420 - ORR1E LTR MaLR -6 353 1 2 1646 627 318 47 53 chrX 139099975 139100334 -27549962 - ORR1E LTR MaLR 0 359 3 2 1646 275 295 96 97 chrX 139100346 139100647 -27549649 + B4 SINE B4 1 292 0 2 1646 231 341 0 0 chrX 139101342 139101424 -27548872 + ID4_ SINE ID 2 83 0 2 1646 495 257 28 0 chrX 139101494 139101603 -27548693 + B1_Mur1 SINE Alu 22 133 -16 2 1646 524 180 103 51 chrX 139101645 139101762 -27548534 + RSINE1 SINE B4 3 125 -40 2 1646 879 135 0 39 chrX 139101795 139101934 -27548362 + B1_Mur3 SINE Alu 1 136 -13 2 1646 243 0 0 0 chrX 139101934 139101961 -27548335 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 2 1646 879 135 0 39 chrX 139101961 139101975 -27548321 + B1_Mur3 SINE Alu 137 148 -1 2 1646 26 30 0 0 chrX 139102095 139102128 -27548168 + AT_rich Low_complexity Low_complexity 1 33 0 2 1646 358 229 29 0 chrX 139102198 139102268 -27548028 - ID4 SINE ID -6 77 6 2 1646 230 291 0 0 chrX 139102312 139102367 -27547929 + ID_B1 SINE B4 93 147 -77 2 1646 480 314 64 45 chrX 139102527 139102562 -27547734 + B4A SINE B4 63 96 -196 2 1646 1691 137 62 14 chrX 139102562 139102850 -27547446 + Lx4A LINE L1 6757 7058 0 2 1646 480 314 64 45 chrX 139102850 139103034 -27547262 + B4A SINE B4 97 286 -6 2 1646 204 97 0 0 chrX 139103598 139103629 -27546667 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1646 185 164 29 43 chrX 139104171 139104241 -27546055 + CT-rich Low_complexity Low_complexity 5 73 0 2 1646 325 305 51 35 chrX 139105120 139105317 -27544979 - MIRb SINE MIR -6 262 63 2 1646 296 319 44 0 chrX 139105475 139105566 -27544730 - B4 SINE B4 -144 148 54 2 1646 645 299 133 108 chrX 139106189 139106518 -27543778 + MER44C DNA MER2_type 4 349 -384 2 1646 576 224 16 115 chrX 139106518 139106700 -27543596 - RSINE1 SINE B4 0 165 2 2 1646 645 299 133 108 chrX 139106700 139106760 -27543536 + MER44C DNA MER2_type 350 403 -330 2 1646 279 321 54 0 chrX 139106774 139106886 -27543410 - PB1D7 SINE Alu -2 118 1 2 1646 890 234 130 7 chrX 139106940 139107216 -27543080 + MER44C DNA MER2_type 424 733 0 2 1646 611 202 24 16 chrX 139107842 139107968 -27542328 + B1_Mur2 SINE Alu 2 128 -21 2 1646 225 0 0 0 chrX 139107977 139108002 -27542294 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 1646 923 116 0 14 chrX 139108006 139108146 -27542150 + B1_Mus2 SINE Alu 9 146 -1 3 1646 216 179 29 43 chrX 139108147 139108217 -27542079 + A-rich Low_complexity Low_complexity 5 73 0 3 1646 255 93 0 0 chrX 139108256 139108299 -27541997 + (T)n Simple_repeat Simple_repeat 1 43 0 3 1646 1193 54 7 0 chrX 139108299 139108446 -27541850 - B1_Mus1 SINE Alu 0 148 1 3 1646 1744 42 0 5 chrX 139108481 139108694 -27541602 + L1_Mus1 LINE L1 6354 6565 -2 3 1646 642 277 61 141 chrX 139108852 139109227 -27541069 - MTEa LTR MaLR 0 379 34 3 1646 766 231 0 0 chrX 139109227 139109370 -27540926 + B1_Mur2 SINE Alu 2 144 -5 3 1646 642 277 61 141 chrX 139109370 139109406 -27540890 - MTEa LTR MaLR -346 33 1 3 1646 337 250 0 0 chrX 139109595 139109663 -27540633 + ID4 SINE ID 12 79 -4 3 1646 255 193 93 36 chrX 139109682 139109769 -27540527 + PB1 SINE Alu 5 96 -31 3 1646 331 318 9 52 chrX 139109841 139109957 -27540339 + PB1D10 SINE Alu 5 115 -2 3 1646 464 277 84 0 chrX 139110025 139110144 -27540152 + B1F SINE Alu 12 140 -9 3 1646 396 0 0 0 chrX 139110180 139110224 -27540072 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 1646 703 237 200 16 chrX 139110231 139110476 -27539820 + L1ME3 LINE L1 5850 6139 -23 3 1646 426 85 0 0 chrX 139110749 139110808 -27539488 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 1646 506 287 41 77 chrX 139110942 139111112 -27539184 - RSINE1 SINE B4 0 165 2 3 1646 666 257 14 7 chrX 139111388 139111533 -27538763 - RSINE1 SINE B4 -17 148 3 3 1646 450 0 0 0 chrX 139111692 139111742 -27538554 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1646 207 0 0 0 chrX 139111926 139111949 -27538347 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1646 353 345 49 14 chrX 139112127 139112271 -27538025 - B1F1 SINE Alu 0 149 1 3 1646 452 280 148 39 chrX 139112650 139112832 -27537464 - RMER15 LTR ERVL -15 560 359 3 1646 624 208 15 8 chrX 139112865 139112996 -27537300 + B1_Mur2 SINE Alu 17 148 -1 3 1646 623 222 52 7 chrX 139113338 139113474 -27536822 + RSINE1 SINE B4 3 144 -21 3 1646 279 79 0 0 chrX 139113497 139113535 -27536761 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 3 1646 1061 43 0 0 chrX 139114019 139114157 -27536139 - B1_Mus1 SINE Alu -1 147 10 3 1646 219 276 92 0 chrX 139114233 139114320 -27535976 - MIR SINE MIR -51 211 117 3 1646 180 0 0 0 chrX 139114391 139114411 -27535885 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3 1646 189 0 0 0 chrX 139114421 139114442 -27535854 + (CAA)n Simple_repeat Simple_repeat 1 21 0 3 1646 255 130 0 0 chrX 139114923 139114977 -27535319 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 1646 235 319 0 31 chrX 139115066 139115163 -27535133 + GA-rich Low_complexity Low_complexity 1 94 0 3 1646 216 0 0 0 chrX 139115623 139115647 -27534649 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 3 1646 318 50 0 0 chrX 139115743 139115783 -27534513 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1646 266 299 0 61 chrX 139115783 139115810 -27534486 + polypurine Low_complexity Low_complexity 4 27 0 3 1646 216 0 0 0 chrX 139115810 139115834 -27534462 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1646 266 299 0 61 chrX 139115834 139115970 -27534326 + GA-rich Low_complexity Low_complexity 28 157 0 3 1646 299 259 151 25 chrX 139119227 139119346 -27530950 + MIR3 SINE MIR 75 208 0 3 1646 228 67 0 0 chrX 139119403 139119433 -27530863 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1646 448 250 26 18 chrX 139120945 139121059 -27529237 + PB1D10 SINE Alu 3 117 0 3 1646 424 60 45 0 chrX 139121117 139121184 -27529112 + (TTTC)n Simple_repeat Simple_repeat 2 71 0 3 1646 192 97 0 0 chrX 139121514 139121545 -27528751 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1646 514 305 14 28 chrX 139121547 139121692 -27528604 - RSINE1 SINE B4 -12 153 11 3 1646 356 70 69 11 chrX 139121870 139121957 -27528339 + CT-rich Low_complexity Low_complexity 2 93 0 3 1646 461 222 102 8 chrX 139121957 139122084 -27528212 - B1_Mur1 SINE Alu -6 143 5 3 1646 818 260 13 27 chrX 139122134 139122359 -27527937 + ID_B1 SINE B4 2 223 -1 3 1646 21 0 0 0 chrX 139122486 139122507 -27527789 + GC_rich Low_complexity Low_complexity 1 21 0 3 1646 729 129 0 0 chrX 139123406 139123522 -27526774 + (CA)n Simple_repeat Simple_repeat 1 116 0 3 1646 23 0 0 0 chrX 139123820 139123843 -27526453 + AT_rich Low_complexity Low_complexity 1 23 0 3 1646 23 0 0 0 chrX 139124238 139124261 -27526035 + AT_rich Low_complexity Low_complexity 1 23 0 3 1646 1181 50 0 0 chrX 139125122 139125261 -27525035 + B1_Mus1 SINE Alu 1 139 -9 3 1646 792 172 63 104 chrX 139125412 139125633 -27524663 - B3 SINE B2 -3 213 2 3 1646 282 372 38 23 chrX 139125652 139125784 -27524512 - L2b LINE L2 -4 3371 3238 3 1646 187 196 0 61 chrX 139125925 139125974 -27524322 + L2a LINE L2 3308 3353 -73 3 1646 570 229 14 35 chrX 139126029 139126174 -27524122 + B1_Mur1 SINE Alu 2 143 -6 3 1646 834 26 26 0 chrX 139126178 139126291 -27524005 + (GGAA)n Simple_repeat Simple_repeat 2 117 0 3 1646 220 271 0 78 chrX 139126313 139126377 -27523919 + ID4 SINE ID 24 82 -1 3 1646 255 103 0 0 chrX 139126667 139126706 -27523590 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 3 1646 322 203 0 0 chrX 139126889 139126948 -27523348 + RSINE1 SINE B4 65 123 -42 3 1646 21 0 0 0 chrX 139127106 139127127 -27523169 + AT_rich Low_complexity Low_complexity 1 21 0 3 1646 247 277 98 0 chrX 139127212 139127324 -27522972 - RSINE1 SINE B4 0 165 43 3 1646 558 245 14 0 chrX 139127356 139127495 -27522801 + B1_Mur1 SINE Alu 1 141 -8 3 1646 584 187 14 50 chrX 139127955 139128096 -27522200 + B1_Mur4 SINE Alu 9 144 -6 3 1646 231 61 0 0 chrX 139128124 139128157 -27522139 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 3 1646 648 192 23 39 chrX 139128158 139128288 -27522008 + B1_Mm SINE Alu 3 130 -19 3 1646 356 337 32 17 chrX 139129186 139129389 -27520907 + MIR SINE MIR 66 268 0 3 1646 302 221 14 56 chrX 139130257 139130329 -27519967 - ID4 SINE ID -14 69 1 3 1646 390 21 0 0 chrX 139130462 139130509 -27519787 + (CAG)n Simple_repeat Simple_repeat 1 47 0 3 1646 761 191 8 0 chrX 139130887 139131018 -27519278 + B1_Mur4 SINE Alu 1 132 -18 3 1646 186 103 0 0 chrX 139131020 139131049 -27519247 + (G)n Simple_repeat Simple_repeat 1 29 0 3 1646 1075 74 0 69 chrX 139131083 139131242 -27519054 + B1_Mus1 SINE Alu 1 148 0 3 1646 322 257 26 52 chrX 139133189 139133304 -27516992 - PB1D10 SINE Alu -1 116 5 3 1646 276 201 65 9 chrX 139133551 139133640 -27516656 - MIR SINE MIR -105 171 84 3 1646 238 305 30 78 chrX 139134601 139134768 -27515528 + MIR3 SINE MIR 17 175 -33 3 1646 263 316 95 0 chrX 139134748 139134843 -27515453 + MIR SINE MIR 15 118 -144 3 1646 573 171 109 58 chrX 139135028 139135165 -27515131 - B1_Mus1 SINE Alu -3 145 2 3 1646 364 192 289 25 chrX 139135178 139135337 -27514959 - B3 SINE B2 -6 210 10 3 1646 229 323 75 19 chrX 139136081 139136242 -27514054 - MER117 DNA MER1_type 0 197 28 3 1646 182 359 109 0 chrX 139136393 139136549 -27513747 + L2c LINE L2 3013 3185 -202 3 1646 240 163 0 0 chrX 139136668 139136711 -27513585 + CT-rich Low_complexity Low_complexity 2 44 0 3 1646 303 336 7 105 chrX 139136711 139136864 -27513432 - ID_B1 SINE B4 -20 204 67 3 1646 243 114 0 0 chrX 139137441 139137485 -27512811 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1646 513 115 0 0 chrX 139137693 139137771 -27512525 + (TTCC)n Simple_repeat Simple_repeat 1 78 0 3 1646 248 267 0 32 chrX 139137963 139138025 -27512271 + ID4 SINE ID 24 83 0 3 1646 312 48 0 0 chrX 139138443 139138485 -27511811 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 1646 238 253 11 0 chrX 139138487 139138574 -27511722 + (CA)n Simple_repeat Simple_repeat 2 89 0 3 1646 246 156 31 15 chrX 139138507 139138572 -27511724 + (CAGA)n Simple_repeat Simple_repeat 4 69 0 3 1646 1281 80 0 0 chrX 139138884 139139059 -27511237 + (TCTCC)n Simple_repeat Simple_repeat 2 176 0 3 1646 462 228 6 12 chrX 139139062 139139230 -27511066 + CT-rich Low_complexity Low_complexity 1 166 0 3 1646 641 212 36 14 chrX 139139230 139139369 -27510927 - B1_Mus2 SINE Alu -5 142 1 3 1646 343 261 59 0 chrX 139140169 139140288 -27510008 - MIR3 SINE MIR -17 191 66 3 1646 242 232 0 0 chrX 139140622 139140678 -27509618 - RMER15 LTR ERVL -117 458 403 3 1646 689 243 52 6 chrX 139141861 139142035 -27508261 - ID_B1 SINE B4 -10 214 33 3 1646 544 230 30 117 chrX 139142437 139142668 -27507628 - B3A SINE B2 -3 213 3 3 1646 266 183 0 32 chrX 139143204 139143266 -27507030 - MIR SINE MIR -25 237 178 3 1646 38779 29 0 0 chrX 139143396 139149674 -27500622 - L1Md_T LINE L1 0 6585 211 3 1646 821 289 63 74 chrX 139149681 139149919 -27500377 - L1M5 LINE L1 -1768 4378 4160 3 1646 776 186 156 11 chrX 139149919 139150098 -27500198 - B3 SINE B2 -11 205 1 3 1646 821 289 63 74 chrX 139150098 139150536 -27499760 - L1M5 LINE L1 -1987 4159 3709 3 1646 788 117 0 81 chrX 139150538 139150687 -27499609 - B1_Mur3 SINE Alu -5 144 8 3 1646 355 210 9 65 chrX 139150692 139150845 -27499451 - L1M5 LINE L1 -2449 3694 3556 3 1646 24 0 0 0 chrX 139153221 139153245 -27497051 + AT_rich Low_complexity Low_complexity 1 24 0 3 1646 394 324 63 68 chrX 139154318 139154540 -27495756 - MER58A DNA MER1_type -1 223 3 3 1646 255 125 0 121 chrX 139155012 139155103 -27495193 + A-rich Low_complexity Low_complexity 2 81 0 3 1646 1009 98 7 0 chrX 139155120 139155263 -27495033 - B1_Mus1 SINE Alu 0 148 5 4 1646 198 0 0 0 chrX 139155563 139155585 -27494711 + (TC)n Simple_repeat Simple_repeat 1 22 0 4 1646 360 257 58 29 chrX 139156322 139156426 -27493870 - PB1D9 SINE Alu -11 109 3 4 1646 815 244 23 9 chrX 139157085 139157304 -27492992 + ID_B1 SINE B4 2 223 -1 4 1646 260 300 20 20 chrX 139157554 139157656 -27492640 + MIRb SINE MIR 80 181 -87 4 1646 669 94 38 0 chrX 139157708 139157814 -27492482 + URR1B DNA MER1_type 116 225 0 4 1646 296 239 74 41 chrX 139158769 139158891 -27491405 - L1ME4a LINE L1 -2 6122 5997 4 1646 270 292 78 17 chrX 139159211 139159326 -27490970 + Lx8 LINE L1 7151 7272 -201 4 1646 468 150 0 0 chrX 139159361 139159441 -27490855 + (GA)n Simple_repeat Simple_repeat 2 81 0 4 1646 449 235 80 93 chrX 139159728 139159878 -27490418 - ID_B1 SINE B4 -10 214 67 4 1646 210 222 0 0 chrX 139159871 139159907 -27490389 - PB1D10 SINE Alu -81 36 1 4 1646 226 47 70 0 chrX 139159918 139159961 -27490335 + (TTTG)n Simple_repeat Simple_repeat 4 49 0 4 1646 281 309 0 0 chrX 139160675 139160743 -27489553 + ID4_ SINE ID 10 77 -6 4 1646 268 313 12 0 chrX 139160743 139160758 -27489538 + ID_B1 SINE B4 10 93 -131 4 1646 396 143 0 0 chrX 139160771 139160855 -27489441 + (GA)n Simple_repeat Simple_repeat 1 84 0 4 1646 311 310 117 36 chrX 139160975 139161256 -27489040 + MLT1M LTR MaLR 18 321 -351 4 1646 260 337 11 0 chrX 139162368 139162457 -27487839 - B1F SINE Alu -58 91 2 4 1646 231 232 0 0 chrX 139162969 139163025 -27487271 + T-rich Low_complexity Low_complexity 1 56 0 4 1646 759 165 5 0 chrX 139163030 139163167 -27487129 - B1_Mus2 SINE Alu -7 140 1 4 1646 447 19 0 0 chrX 139163171 139163223 -27487073 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 1646 478 209 41 41 chrX 139163271 139163416 -27486880 + MamRep1161 DNA TcMar 1 145 -812 4 1646 646 236 121 6 chrX 139164109 139164275 -27486021 - RMER5 LTR ERV1 -11 523 339 4 1646 244 319 0 0 chrX 139164262 139164331 -27485965 - RMER30 DNA MER1_type -132 70 2 4 1646 281 247 68 0 chrX 139164964 139165037 -27485259 + U6 snRNA snRNA 1 78 -29 4 1646 295 221 0 105 chrX 139165037 139165123 -27485173 + RSINE1 SINE B4 2 78 -87 4 1646 369 0 0 0 chrX 139165132 139165173 -27485123 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 1646 341 270 10 10 chrX 139165258 139165359 -27484937 + L1MA5 LINE L1 6119 6219 -81 4 1646 428 200 21 241 chrX 139165433 139165624 -27484672 + B1_Mur1 SINE Alu 1 149 0 4 1646 185 159 23 0 chrX 139166719 139166763 -27483533 + T-rich Low_complexity Low_complexity 2 46 0 4 1646 290 115 0 19 chrX 139166885 139166938 -27483358 + (GGA)n Simple_repeat Simple_repeat 2 53 0 4 1646 243 257 182 39 chrX 139167501 139167655 -27482641 - Lx8 LINE L1 0 7473 7298 4 1646 235 242 108 46 chrX 139167671 139167736 -27482560 - Lx8 LINE L1 -240 7233 7165 4 1646 258 339 70 41 chrX 139167810 139167982 -27482314 + MER5B DNA MER1_type 2 178 0 4 1646 197 33 33 0 chrX 139168050 139168080 -27482216 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 1646 4644 115 44 27 chrX 139168351 139169094 -27481202 - RMER6A LTR ERVK 0 756 1 4 1646 353 283 26 26 chrX 139169202 139169318 -27480978 - PB1D10 SINE Alu -1 116 1 4 1646 225 329 0 0 chrX 139169859 139169929 -27480367 + (TATG)n Simple_repeat Simple_repeat 1 70 0 4 1646 248 268 36 12 chrX 139170182 139170265 -27480031 - ID SINE ID -139 85 1 4 1646 284 102 20 0 chrX 139170691 139170740 -27479556 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1646 680 253 64 39 chrX 139170744 139170900 -27479396 - B3A SINE B2 -38 160 1 4 1646 752 293 57 33 chrX 139171041 139171253 -27479043 + ID_B1 SINE B4 6 222 -2 4 1646 504 0 0 0 chrX 139171362 139171418 -27478878 + (CAAAA)n Simple_repeat Simple_repeat 2 57 0 4 1646 189 0 0 0 chrX 139171418 139171439 -27478857 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 1646 183 80 0 0 chrX 139171440 139171465 -27478831 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 4 1646 355 225 0 59 chrX 139171930 139172015 -27478281 - ID_B1 SINE B4 -6 218 139 4 1646 205 314 16 63 chrX 139172659 139172785 -27477511 + MIRb SINE MIR 149 268 0 4 1646 566 323 77 5 chrX 139172815 139173036 -27477260 + MER44D DNA MER2_type 5 241 -464 4 1646 231 310 72 66 chrX 139173006 139173172 -27477124 + MER44D DNA MER2_type 510 676 -29 4 1646 615 224 42 0 chrX 139173288 139173431 -27476865 - B1F1 SINE Alu 0 149 1 4 1646 540 177 118 24 chrX 139173533 139173660 -27476636 - MER91C DNA Tip100 -1 139 1 4 1646 535 113 31 0 chrX 139173791 139173888 -27476408 + (GGGAGA)n Simple_repeat Simple_repeat 3 102 0 4 1646 228 226 19 0 chrX 139174336 139174389 -27475907 - L1MB8 LINE L1 -9 6169 6116 4 1646 436 260 0 48 chrX 139174408 139174513 -27475783 + PB1D10 SINE Alu 9 108 -9 4 1646 259 289 175 56 chrX 139174513 139174551 -27475745 + B4A SINE B4 94 253 -39 4 1646 1128 291 31 108 chrX 139174551 139174807 -27475489 - L1MB8 LINE L1 -69 6109 5878 4 1646 275 282 25 13 chrX 139174807 139174886 -27475410 - ID4 SINE ID -2 81 2 4 1646 1128 291 31 108 chrX 139174886 139175124 -27475172 - L1MB8 LINE L1 -301 5877 5638 4 1646 1209 192 5 5 chrX 139175124 139175333 -27474963 + B3 SINE B2 1 209 -7 4 1646 1128 291 31 108 chrX 139175333 139175511 -27474785 - L1MB8 LINE L1 -541 5637 5490 4 1646 253 264 0 14 chrX 139175527 139175600 -27474696 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 1646 461 320 78 51 chrX 139175602 139175894 -27474402 - B4 SINE B4 -1 291 2 4 1646 517 228 2 25 chrX 139175936 139176086 -27474210 - L1MB8 LINE L1 -740 5444 5297 4 1646 561 241 45 0 chrX 139176244 139176377 -27473919 - RSINE1 SINE B4 0 165 27 4 1646 733 254 35 0 chrX 139176561 139176703 -27473593 + B3 SINE B2 2 148 -68 4 1646 587 276 121 15 chrX 139176821 139176924 -27473372 - Lx8 LINE L1 -13 7460 7356 4 1646 766 235 0 13 chrX 139176924 139177075 -27473221 - B1_Mur1 SINE Alu 0 149 1 4 1646 587 276 121 15 chrX 139177075 139177177 -27473119 - Lx8 LINE L1 -118 7355 7234 4 1646 449 17 50 0 chrX 139177238 139177298 -27472998 + (CATAT)n Simple_repeat Simple_repeat 2 64 0 4 1646 620 254 140 21 chrX 139177408 139177694 -27472602 - L1MB8 LINE L1 -1250 4896 4577 4 1646 922 85 14 7 chrX 139177997 139178139 -27472157 + (TCCCC)n Simple_repeat Simple_repeat 5 147 0 4 1646 711 224 0 27 chrX 139178174 139178321 -27471975 - B1_Mur2 SINE Alu -1 148 6 4 1646 924 279 166 14 chrX 139178324 139178830 -27471466 - L1MC4a LINE L1 -2 7880 7298 4 1646 362 301 1 4 chrX 139178842 139178977 -27471319 - L1MC4a LINE L1 -780 7215 7083 4 1646 304 206 16 0 chrX 139179590 139179653 -27470643 - MIR SINE MIR -72 190 127 4 1646 238 330 37 19 chrX 139179654 139179762 -27470534 - MamRep605 Unknown Unknown -312 564 455 4 1646 340 357 57 26 chrX 139179827 139180054 -27470242 - MIRb SINE MIR -5 263 30 4 1646 387 253 167 0 chrX 139180063 139180147 -27470149 + PB1D10 SINE Alu 28 125 -2 4 1646 189 74 0 0 chrX 139180147 139180174 -27470122 + (CAA)n Simple_repeat Simple_repeat 2 28 0 4 1646 228 0 44 67 chrX 139180423 139180468 -27469828 + (TTTTTG)n Simple_repeat Simple_repeat 4 47 0 4 1646 1272 42 7 0 chrX 139180478 139180622 -27469674 - B1_Mus2 SINE Alu 0 147 3 4 1646 534 31 0 0 chrX 139180622 139180686 -27469610 + (TTTTC)n Simple_repeat Simple_repeat 3 66 0 4 1646 1633 201 134 12 chrX 139180956 139181284 -27469012 - ORR1D2 LTR MaLR 0 370 3 4 1646 283 313 121 9 chrX 139181291 139181407 -27468889 - B1F SINE Alu -20 129 1 4 1646 189 107 0 0 chrX 139181535 139181563 -27468733 + (TA)n Simple_repeat Simple_repeat 1 28 0 4 1646 287 177 0 0 chrX 139181574 139181636 -27468660 + MER2 DNA MER2_type 157 218 -127 4 1646 1233 30 0 0 chrX 139181640 139181775 -27468521 + B1_Mus2 SINE Alu 1 135 -12 4 1646 988 211 21 16 chrX 139182054 139182242 -27468054 + B3 SINE B2 1 189 -27 4 1646 189 74 0 0 chrX 139182284 139182311 -27467985 + (TATG)n Simple_repeat Simple_repeat 2 28 0 4 1646 204 222 61 45 chrX 139183494 139183560 -27466736 + MIRc SINE MIR 122 188 -80 4 1646 243 0 0 0 chrX 139184048 139184075 -27466221 + (TTG)n Simple_repeat Simple_repeat 1 27 0 4 1646 561 289 131 26 chrX 139184770 139185076 -27465220 - MER46C DNA MER2_type 0 338 1 4 1646 723 274 11 0 chrX 139185892 139186082 -27464214 - MER53 DNA hAT 0 193 2 4 1646 222 37 0 0 chrX 139186235 139186262 -27464034 + (TC)n Simple_repeat Simple_repeat 1 27 0 4 1646 375 121 0 0 chrX 139186263 139186321 -27463975 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 1646 204 40 0 0 chrX 139186351 139186376 -27463920 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1646 246 362 35 0 chrX 139189313 139189487 -27460809 - L1M5 LINE L1 -2263 3883 3704 4 1646 228 327 73 18 chrX 139190339 139190448 -27459848 - LTR41 LTR ERVL -447 321 207 4 1646 501 265 107 149 chrX 139190785 139191113 -27459183 + MER2 DNA MER2_type 1 314 -31 4 1646 428 291 9 0 chrX 139191233 139191343 -27458953 - PB1D9 SINE Alu -8 112 2 4 1646 5107 102 57 3 chrX 139191691 139192390 -27457906 - RMER19A LTR ERVK 0 737 1 4 1646 551 250 0 0 chrX 139192391 139192507 -27457789 - B3A SINE B2 -78 120 5 4 1646 503 261 77 0 chrX 139192521 139192651 -27457645 - B1F1 SINE Alu -9 140 1 4 1646 441 0 0 0 chrX 139192658 139192707 -27457589 + (TTA)n Simple_repeat Simple_repeat 2 50 0 4 1646 411 240 18 80 chrX 139192707 139192820 -27457476 - PB1D9 SINE Alu -10 110 5 4 1646 278 256 0 128 chrX 139192745 139192839 -27457457 - MT2B LTR ERVL -367 234 153 4 1646 424 260 31 0 chrX 139192945 139193041 -27457255 - B1F SINE Alu -11 138 40 4 1646 250 350 0 0 chrX 139193202 139193262 -27457034 - ID_B1 SINE B4 -81 143 84 4 1646 1041 259 0 9 chrX 139193412 139193630 -27456666 - B3 SINE B2 0 216 1 4 1646 287 65 22 0 chrX 139194498 139194544 -27455752 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 4 1646 252 238 23 70 chrX 139194544 139194624 -27455672 - ID SINE ID -144 80 4 5 1646 704 287 98 57 chrX 139194801 139195293 -27455003 - L1M6 LINE L1 -5300 1196 685 5 1646 397 348 97 29 chrX 139195532 139195881 -27454415 - L1M6 LINE L1 -6120 376 4 5 1646 234 291 46 11 chrX 139195999 139196086 -27454210 - Cheshire DNA MER1_type -2164 256 167 5 1646 713 242 7 32 chrX 139196560 139196714 -27453582 + RSINE1 SINE B4 2 151 -14 5 1646 234 0 0 0 chrX 139197453 139197479 -27452817 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 5 1646 24 0 0 0 chrX 139197950 139197974 -27452322 + GC_rich Low_complexity Low_complexity 1 24 0 5 1647 696 109 39 0 chrX 139198492 139198620 -27451676 + (TTTCC)n Simple_repeat Simple_repeat 2 134 0 5 1647 264 216 0 0 chrX 139198651 139198753 -27451543 + CT-rich Low_complexity Low_complexity 2 103 0 5 1647 257 356 0 0 chrX 139198753 139198826 -27451470 - ID4_ SINE ID -10 73 1 5 1647 408 40 0 0 chrX 139199631 139199681 -27450615 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 5 1647 296 272 22 110 chrX 139199861 139199952 -27450344 + ID_B1 SINE B4 81 163 -61 5 1647 216 0 0 0 chrX 139199954 139199978 -27450318 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 5 1647 2554 59 0 0 chrX 139201045 139201352 -27448944 - L1Md_F2 LINE L1 -8 6574 6268 5 1647 433 319 83 57 chrX 139201934 139202163 -27448133 - MER74A LTR ERVL -123 435 201 5 1647 236 322 63 47 chrX 139202146 139202273 -27448023 - MER74A LTR ERVL -382 240 112 5 1647 201 39 0 0 chrX 139202288 139202314 -27447982 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1647 25 0 0 0 chrX 139202341 139202366 -27447930 + AT_rich Low_complexity Low_complexity 1 25 0 5 1647 684 240 56 0 chrX 139202589 139202714 -27447582 + B1_Mur2 SINE Alu 5 136 -13 5 1647 261 0 0 0 chrX 139202718 139202747 -27447549 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1647 435 337 36 16 chrX 139203824 139204017 -27446279 + RMER30 DNA MER1_type 4 200 -2 5 1647 384 40 0 0 chrX 139204054 139204104 -27446192 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1647 1043 280 40 27 chrX 139204717 139205018 -27445278 - MTE2b LTR MaLR -12 367 63 5 1647 1220 65 0 0 chrX 139206061 139206214 -27444082 + B2_Mm2 SINE B2 1 153 -42 5 1647 387 0 0 0 chrX 139206214 139206257 -27444039 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 5 1647 470 17 0 17 chrX 139206700 139206760 -27443536 + (TC)n Simple_repeat Simple_repeat 2 60 0 5 1647 225 0 0 0 chrX 139206776 139206801 -27443495 + (GA)n Simple_repeat Simple_repeat 1 25 0 5 1647 294 29 0 0 chrX 139206801 139206836 -27443460 + (TAGG)n Simple_repeat Simple_repeat 2 36 0 5 1647 189 280 60 0 chrX 139207083 139207133 -27443163 + L2 LINE L2 352 404 -3015 5 1647 296 300 25 0 chrX 139207135 139207215 -27443081 + ID4_ SINE ID 2 83 0 5 1647 258 253 111 33 chrX 139207371 139207461 -27442835 + MER5A1 DNA MER1_type 12 108 -58 5 1647 251 274 32 0 chrX 139207740 139207802 -27442494 + tRNA-Ala-GCY_ tRNA tRNA 4 67 -8 5 1647 742 266 103 63 chrX 139208533 139208834 -27441462 - MLT1B LTR MaLR -63 327 15 5 1647 245 352 22 0 chrX 139208918 139209009 -27441287 + CT-rich Low_complexity Low_complexity 1 93 0 5 1647 210 171 0 0 chrX 139209816 139209857 -27440439 + CT-rich Low_complexity Low_complexity 4 44 0 5 1647 29 0 0 0 chrX 139209980 139210009 -27440287 + AT_rich Low_complexity Low_complexity 1 29 0 5 1647 369 266 58 28 chrX 139212255 139212383 -27437913 + B1F SINE Alu 3 144 -5 5 1647 293 0 27 0 chrX 139212456 139212493 -27437803 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 5 1647 21 57 0 0 chrX 139212567 139212602 -27437694 + AT_rich Low_complexity Low_complexity 1 35 0 5 1647 195 129 0 0 chrX 139212879 139212910 -27437386 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1647 316 313 10 10 chrX 139213011 139213111 -27437185 - PB1D10 SINE Alu 0 117 18 5 1647 226 224 85 17 chrX 139213065 139213124 -27437172 - B4A SINE B4 -145 147 85 5 1647 210 333 50 25 chrX 139213289 139213409 -27436887 + MIR SINE MIR 16 138 -124 5 1647 25 0 0 0 chrX 139213683 139213708 -27436588 + AT_rich Low_complexity Low_complexity 1 25 0 5 1647 441 0 0 0 chrX 139213708 139213757 -27436539 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1647 258 160 0 0 chrX 139213841 139213891 -27436405 + (TCTG)n Simple_repeat Simple_repeat 2 51 0 5 1647 257 330 172 33 chrX 139214148 139214270 -27436026 - B1F SINE Alu -10 139 1 5 1647 494 298 40 53 chrX 139214400 139214627 -27435669 + ID_B1 SINE B4 1 224 0 5 1647 1563 283 114 19 chrX 139214915 139215800 -27434496 - L1MB7 LINE L1 -16 6168 5197 5 1647 260 287 118 26 chrX 139216049 139216342 -27433954 - L1MB7 LINE L1 -964 5182 4852 5 1647 268 336 75 0 chrX 139216472 139216579 -27433717 - PB1D10 SINE Alu 0 117 3 5 1647 584 212 145 6 chrX 139216611 139216777 -27433519 - L1MB7 LINE L1 -1449 4697 4509 5 1647 1190 95 0 0 chrX 139216834 139216981 -27433315 - B1_Mus1 SINE Alu 0 148 2 5 1647 886 196 7 20 chrX 139216993 139217144 -27433152 - B1_Mur3 SINE Alu 0 149 1 5 1647 809 159 80 0 chrX 139217160 139217298 -27432998 - B1_Mur4 SINE Alu 0 150 2 5 1647 246 32 0 0 chrX 139217323 139217354 -27432942 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5 1647 1218 40 0 13 chrX 139217357 139217510 -27432786 - B2_Mm2 SINE B2 -44 151 1 5 1647 888 280 44 69 chrX 139217510 139217917 -27432379 - L1MB7 LINE L1 -1776 4370 3974 5 1647 511 267 0 0 chrX 139218085 139218186 -27432110 + PB1D10 SINE Alu 10 110 -7 5 1647 975 164 222 0 chrX 139218198 139218369 -27431927 + B3 SINE B2 1 209 -7 5 1647 252 253 114 0 chrX 139218549 139218628 -27431668 - MLT1B LTR MaLR 0 390 303 5 1647 207 311 0 16 chrX 139218974 139219036 -27431260 + GA-rich Low_complexity Low_complexity 1 61 0 5 1647 1350 166 9 18 chrX 139219095 139219322 -27430974 - URR1A DNA MER1_type 0 226 2 5 1647 270 300 70 0 chrX 139219329 139219429 -27430867 - ORR1E LTR MaLR -250 109 3 5 1647 800 192 7 58 chrX 139219916 139220071 -27430225 + B1_Mur3 SINE Alu 3 149 0 5 1647 229 240 113 100 chrX 139220199 139220500 -27429796 - L1MC5 LINE L1 -35 7926 7622 5 1647 282 319 58 63 chrX 139222477 139222758 -27427538 - MTEa LTR MaLR -7 372 92 5 1647 258 265 14 14 chrX 139222835 139222904 -27427392 - MTEa LTR MaLR -290 69 1 5 1647 558 246 31 16 chrX 139222982 139223110 -27427186 - Lx8 LINE L1 -389 7084 6955 5 1647 324 120 0 0 chrX 139223180 139223230 -27427066 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1647 797 338 55 11 chrX 139223236 139223508 -27426788 - B4A SINE B4 -7 285 2 5 1647 281 300 122 0 chrX 139223563 139223653 -27426643 - Lx8 LINE L1 -571 6902 6802 5 1647 435 38 0 0 chrX 139223655 139223708 -27426588 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1647 386 270 26 82 chrX 139223745 139223875 -27426421 + B3A SINE B2 5 157 -41 5 1647 988 104 28 0 chrX 139223927 139224071 -27426225 - B1_Mus1 SINE Alu 0 148 1 5 1647 237 245 27 117 chrX 139224248 139224264 -27426032 - B2_Mm2 SINE B2 -93 102 2 5 1647 458 209 0 95 chrX 139224264 139224359 -27425937 - RSINE1 SINE B4 -77 88 3 5 1647 656 288 75 58 chrX 139224382 139224939 -27425357 - L1MB7 LINE L1 -14 6170 5633 5 1647 264 276 49 43 chrX 139225546 139225709 -27424587 - L1MEg LINE L1 -4441 1708 1545 5 1647 201 171 0 0 chrX 139225712 139225747 -27424549 + T-rich Low_complexity Low_complexity 1 35 0 5 1647 1167 82 0 0 chrX 139225753 139225899 -27424397 - B1_Mus1 SINE Alu 0 148 3 5 1647 354 340 124 10 chrX 139225974 139226176 -27424120 - L1MEg LINE L1 -4628 1521 1297 5 1647 405 313 117 14 chrX 139226410 139226584 -27423712 - L1MEg LINE L1 -5099 1126 913 5 1647 233 234 0 0 chrX 139227589 139227636 -27422660 + L2a LINE L2 3376 3422 -4 5 1647 240 322 100 27 chrX 139227821 139227971 -27422325 + MIR SINE MIR 15 175 -87 5 1647 1418 73 0 11 chrX 139229332 139229513 -27420783 - B2_Mm2 SINE B2 -14 181 3 5 1647 1141 93 25 6 chrX 139229550 139229712 -27420584 - B2_Mm2 SINE B2 -14 181 17 5 1647 1188 279 96 18 chrX 139230285 139230682 -27419614 + Lx8 LINE L1 7040 7467 -6 5 1647 434 302 98 47 chrX 139230724 139230978 -27419318 - L1ME3B LINE L1 -261 5979 5713 5 1647 799 250 42 47 chrX 139231033 139231247 -27419049 - MTEb LTR MaLR -118 261 49 5 1647 791 136 6 72 chrX 139231261 139231427 -27418869 + URR1B DNA MER1_type 71 225 0 5 1647 327 238 0 0 chrX 139231431 139231494 -27418802 - MTEb LTR MaLR -316 63 1 5 1647 333 342 102 19 chrX 139231582 139231788 -27418508 - MLT1B LTR MaLR -163 227 5 5 1647 808 270 40 20 chrX 139232674 139232874 -27417422 + Lx8 LINE L1 7169 7372 -101 5 1647 366 292 33 74 chrX 139233016 139233046 -27417250 + B1_Mur2 SINE Alu 1 30 -119 5 1647 1188 128 112 10 chrX 139233046 139233251 -27417045 - URR1A DNA MER1_type 0 226 1 5 1647 366 292 33 74 chrX 139233251 139233342 -27416954 + B1_Mur2 SINE Alu 31 117 -32 5 1647 448 267 0 0 chrX 139233607 139233708 -27416588 - L1MA6 LINE L1 -386 5914 5814 5 1647 964 240 38 55 chrX 139233712 139234003 -27416293 - Lx8 LINE L1 -1 7472 7187 5 1647 689 249 28 164 chrX 139234042 139234243 -27416053 - B3A SINE B2 -1 194 22 5 1647 533 191 54 31 chrX 139234243 139234373 -27415923 - L1MA6 LINE L1 -514 5786 5654 5 1647 1093 189 23 19 chrX 139234857 139235072 -27415224 + B3 SINE B2 1 216 0 5 1647 1745 16 0 0 chrX 139235148 139235339 -27414957 - B2_Mm1a SINE B2 -2 191 1 5 1647 3682 61 7 4 chrX 139235764 139236227 -27414069 + L1Md_F2 LINE L1 6116 6579 -3 5 1647 759 278 45 101 chrX 139236234 139236522 -27413774 + B4A SINE B4 4 275 -17 5 1647 228 163 0 0 chrX 139236572 139236615 -27413681 + CT-rich Low_complexity Low_complexity 3 45 0 5 1647 319 225 0 14 chrX 139237205 139237277 -27413019 - B4 SINE B4 -218 74 4 5 1647 687 334 78 21 chrX 139237846 139238228 -27412068 - L2 LINE L2 -2902 517 114 5 1647 23 33 0 0 chrX 139238923 139238953 -27411343 + AT_rich Low_complexity Low_complexity 1 30 0 5 1647 300 91 0 0 chrX 139239546 139239590 -27410706 + (CCTA)n Simple_repeat Simple_repeat 3 46 0 5 1647 26 30 0 0 chrX 139240102 139240135 -27410161 + AT_rich Low_complexity Low_complexity 1 33 0 5 1647 216 149 0 0 chrX 139240654 139240701 -27409595 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 5 1647 301 45 0 22 chrX 139242010 139242056 -27408240 - B2_Mm2 SINE B2 -14 181 137 6 1647 1257 87 46 0 chrX 139242118 139242291 -27408005 - B2_Mm2 SINE B2 -14 181 1 6 1647 181 306 31 46 chrX 139242694 139242759 -27407537 - L2a LINE L2 -4 3422 3359 6 1647 219 203 0 0 chrX 139243663 139243727 -27406569 + T-rich Low_complexity Low_complexity 2 65 0 6 1647 368 346 73 0 chrX 139244033 139244169 -27406127 - ID_B1 SINE B4 -77 147 2 6 1647 234 174 0 0 chrX 139244377 139244423 -27405873 + (TCG)n Simple_repeat Simple_repeat 2 47 0 6 1647 330 26 0 0 chrX 139244574 139244613 -27405683 + (TATATG)n Simple_repeat Simple_repeat 4 42 0 6 1647 1435 84 16 0 chrX 139244982 139245173 -27405123 - B2_Mm2 SINE B2 0 195 2 6 1647 653 183 122 0 chrX 139245680 139245811 -27404485 - B1_Mus1 SINE Alu 0 148 2 6 1647 601 235 0 11 chrX 139245818 139245839 -27404457 + polypyrimidine Low_complexity Low_complexity 160 180 0 6 1647 1059 139 0 0 chrX 139245839 139246019 -27404277 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 6 1647 847 198 3 8 chrX 139246019 139246357 -27403939 + CT-rich Low_complexity Low_complexity 1 336 0 6 1647 1110 102 0 0 chrX 139246358 139246525 -27403771 + (TCCC)n Simple_repeat Simple_repeat 2 168 0 6 1647 470 228 152 16 chrX 139246619 139246744 -27403552 - RMER30 DNA MER1_type -60 142 1 6 1647 429 289 21 62 chrX 139247488 139247632 -27402664 - RSINE1 SINE B4 -23 142 5 6 1647 220 158 17 17 chrX 139248022 139248061 -27402235 + GA-rich Low_complexity Low_complexity 1 40 0 6 1647 375 23 0 0 chrX 139248061 139248105 -27402191 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1647 220 158 17 17 chrX 139248105 139248123 -27402173 + polypurine Low_complexity Low_complexity 41 58 0 6 1647 205 347 14 14 chrX 139248125 139248198 -27402098 - L2b LINE L2 -216 3159 3087 6 1647 485 271 129 0 chrX 139248658 139248798 -27401498 - RSINE1 SINE B4 -6 159 2 6 1647 1064 244 20 4 chrX 139248868 139249119 -27401177 + MER2 DNA MER2_type 90 344 -1 6 1647 493 234 137 60 chrX 139250106 139250274 -27400022 - Tigger7 DNA MER2_type 0 2491 2311 6 1647 377 329 51 28 chrX 139251027 139251243 -27399053 + Charlie4a DNA MER1_type 39 259 -249 6 1647 725 269 17 17 chrX 139251350 139251524 -27398772 + ID_B1 SINE B4 5 178 -46 6 1647 294 29 0 0 chrX 139251546 139251581 -27398715 + (TC)n Simple_repeat Simple_repeat 2 36 0 6 1647 213 39 0 0 chrX 139251759 139251785 -27398511 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1647 202 251 98 47 chrX 139251953 139252092 -27398204 + L2c LINE L2 3182 3299 -76 6 1647 189 0 0 0 chrX 139252819 139252840 -27397456 + (CA)n Simple_repeat Simple_repeat 1 21 0 6 1647 686 274 181 23 chrX 139253284 139253549 -27396747 - MLT1A0 LTR MaLR -58 307 1 6 1647 480 245 20 0 chrX 139254331 139254433 -27395863 - B4 SINE B4 -10 282 179 6 1647 1520 137 0 22 chrX 139254442 139254674 -27395622 - Lx7 LINE L1 -740 6956 6730 6 1647 580 244 148 37 chrX 139254742 139254904 -27395392 - B3 SINE B2 -3 213 34 6 1647 219 318 34 11 chrX 139255059 139255148 -27395148 + MIRm SINE MIR 38 128 -148 6 1647 585 64 0 0 chrX 139255668 139255746 -27394550 + (TG)n Simple_repeat Simple_repeat 1 78 0 6 1647 475 342 63 22 chrX 139256159 139256428 -27393868 + Charlie4a DNA MER1_type 149 428 -80 6 1647 413 296 28 90 chrX 139257303 139257481 -27392815 + MER5A DNA MER1_type 14 180 -9 6 1647 267 289 75 45 chrX 139257872 139258006 -27392290 + MER5A1 DNA MER1_type 2 139 -27 6 1647 788 337 40 50 chrX 139258144 139258644 -27391652 - L2a LINE L2 -3 3423 2929 6 1647 519 322 53 40 chrX 139258747 139258973 -27391323 - L2a LINE L2 -698 2721 2493 6 1647 261 0 0 0 chrX 139259004 139259033 -27391263 + (TGG)n Simple_repeat Simple_repeat 3 31 0 6 1647 786 292 98 64 chrX 139259159 139259518 -27390778 + MLT1A LTR MaLR 4 374 0 6 1647 196 308 0 0 chrX 139259685 139259750 -27390546 - L2a LINE L2 -1458 1961 1897 6 1647 444 282 56 39 chrX 139259756 139260038 -27390258 - MER33 DNA MER1_type -6 318 1 6 1647 1006 321 117 118 chrX 139260133 139260809 -27389487 - L2a LINE L2 -1608 1811 1075 6 1647 702 134 17 35 chrX 139260809 139260925 -27389371 + B1_Mur3 SINE Alu 27 140 -9 6 1647 1006 321 117 118 chrX 139260925 139261497 -27388799 - L2a LINE L2 -1608 1074 449 6 1647 395 184 114 67 chrX 139261504 139261609 -27388687 + PB1D10 SINE Alu 1 110 -7 6 1647 182 370 37 0 chrX 139261771 139261852 -27388444 + L2 LINE L2 1973 2056 -1363 6 1647 547 318 65 0 chrX 139261890 139262060 -27388236 + MER3 DNA MER1_type 11 191 -18 6 1647 931 156 0 11 chrX 139262106 139262287 -27388009 + CT-rich Low_complexity Low_complexity 1 179 0 6 1647 694 181 46 13 chrX 139262296 139262447 -27387849 - B2_Mm2 SINE B2 -39 156 1 6 1647 224 340 60 80 chrX 139262900 139263101 -27387195 + L2 LINE L2 2746 2942 -477 6 1647 252 100 0 0 chrX 139263997 139264037 -27386259 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1647 387 0 0 0 chrX 139265009 139265052 -27385244 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1647 351 211 99 0 chrX 139265390 139265461 -27384835 - RMER30 DNA MER1_type -2 200 123 6 1647 311 349 65 34 chrX 139265723 139265930 -27384366 - MIRb SINE MIR -38 230 8 6 1647 286 356 29 65 chrX 139266434 139266572 -27383724 - MIR SINE MIR -129 133 1 6 1647 354 61 45 0 chrX 139268946 139269012 -27381284 + (TTTTTG)n Simple_repeat Simple_repeat 3 71 0 6 1647 222 211 0 66 chrX 139269105 139269166 -27381130 + C-rich Low_complexity Low_complexity 4 60 0 6 1647 557 300 141 32 chrX 139273186 139273434 -27376862 + B4A SINE B4 4 278 -14 6 1647 237 83 0 0 chrX 139273441 139273477 -27376819 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1647 610 258 101 43 chrX 139274122 139274329 -27375967 + B4A SINE B4 2 220 -72 6 1647 249 280 146 36 chrX 139275452 139275589 -27374707 + MER104 DNA Tc2 30 181 0 6 1647 419 192 0 147 chrX 139275707 139275823 -27374473 + PB1D10 SINE Alu 1 99 -18 6 1647 279 0 0 0 chrX 139276080 139276111 -27374185 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 1647 267 262 80 31 chrX 139277016 139277151 -27373145 + MIR SINE MIR 43 182 -86 6 1647 188 179 0 51 chrX 139277222 139277281 -27373015 + (CACCAT)n Simple_repeat Simple_repeat 4 59 0 6 1647 865 276 19 14 chrX 139277497 139277809 -27372487 + L1MC1 LINE L1 6003 6249 -84 6 1647 508 263 40 11 chrX 139277837 139278014 -27372282 + L1M4c LINE L1 2165 2346 -4038 6 1647 977 257 55 48 chrX 139278116 139278406 -27371890 + B4 SINE B4 1 292 0 6 1647 424 286 49 35 chrX 139278457 139278660 -27371636 + L1M4c LINE L1 4489 4694 -1682 6 1647 597 264 56 59 chrX 139278882 139279297 -27370999 + L1M4c LINE L1 5037 5546 -830 6 1647 4682 51 15 16 chrX 139279297 139279915 -27370381 + L1Md_F2 LINE L1 5966 6582 0 6 1647 257 231 106 109 chrX 139279915 139280014 -27370282 + L1M4c LINE L1 5547 5675 -741 6 1647 272 305 106 63 chrX 139280231 139280420 -27369876 - ORR1E LTR MaLR -162 197 1 6 1647 429 281 79 67 chrX 139281221 139281385 -27368911 + B3A SINE B2 2 167 -31 6 1647 246 62 0 0 chrX 139281386 139281418 -27368878 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1647 1248 278 70 20 chrX 139283465 139283905 -27366391 + MER44B DNA MER2_type 25 486 -64 6 1647 357 269 0 25 chrX 139283958 139284038 -27366258 - ID4_ SINE ID 0 83 6 6 1647 1198 34 0 39 chrX 139284048 139284201 -27366095 - B1_Mm SINE Alu 0 147 1 6 1647 240 356 28 19 chrX 139284747 139284853 -27365443 - AmnSINE1 SINE SINE -197 378 272 6 1647 219 150 0 0 chrX 139286181 139286221 -27364075 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1647 240 35 0 0 chrX 139286784 139286813 -27363483 + (GGGGA)n Simple_repeat Simple_repeat 3 31 0 6 1647 228 67 0 0 chrX 139287058 139287088 -27363208 + (A)n Simple_repeat Simple_repeat 1 30 0 6 1647 209 296 0 0 chrX 139287740 139287813 -27362483 + (TATATG)n Simple_repeat Simple_repeat 1 73 0 6 1647 394 181 19 0 chrX 139287985 139288090 -27362206 + CT-rich Low_complexity Low_complexity 2 108 0 6 1647 182 139 0 44 chrX 139289726 139289771 -27360525 + GA-rich Low_complexity Low_complexity 2 44 0 6 1647 344 278 209 13 chrX 139290247 139290400 -27359896 - MIR3 SINE MIR -19 189 7 6 1647 219 359 83 32 chrX 139291163 139291416 -27358880 + L2c LINE L2 3066 3331 -56 6 1647 560 152 0 11 chrX 139293607 139293700 -27356596 - BC1_Mm scRNA scRNA -59 93 2 6 1647 641 55 0 0 chrX 139294025 139294116 -27356180 + Lx LINE L1 6564 6654 0 6 1647 303 135 77 0 chrX 139294182 139294234 -27356062 + B1F SINE Alu 86 141 -8 6 1647 21 0 0 0 chrX 139295796 139295817 -27354479 + AT_rich Low_complexity Low_complexity 1 21 0 6 1647 631 276 133 52 chrX 139296388 139296621 -27353675 + ORR1E LTR MaLR 89 340 -19 6 1647 33846 35 0 0 chrX 139297400 139302631 -27347665 + L1Md_T LINE L1 262 5589 -297 6 1647 8985 6 0 3 chrX 139302631 139303630 -27346666 + L1Md_T LINE L1 5590 6585 0 6 1647 438 108 0 0 chrX 139303638 139303712 -27346584 + (A)n Simple_repeat Simple_repeat 1 74 0 6 1647 180 0 0 0 chrX 139304317 139304337 -27345959 + (T)n Simple_repeat Simple_repeat 1 20 0 6 1647 223 276 35 0 chrX 139306897 139306955 -27343341 - MIR3 SINE MIR -41 167 108 6 1647 24 0 0 0 chrX 139309130 139309154 -27341142 + AT_rich Low_complexity Low_complexity 1 24 0 6 1647 192 174 0 0 chrX 139309469 139309490 -27340806 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1647 681 82 0 0 chrX 139309490 139309587 -27340709 + (GA)n Simple_repeat Simple_repeat 1 97 0 6 1647 192 174 0 0 chrX 139309587 139309611 -27340685 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 1647 777 243 154 5 chrX 139309646 139309994 -27340302 - L1MB5 LINE L1 -123 6051 5627 6 1647 885 93 187 24 chrX 139310373 139310539 -27339757 + B2_Mm2 SINE B2 2 194 -1 6 1647 447 257 0 9 chrX 139311190 139311296 -27339000 + PB1D10 SINE Alu 12 116 -1 6 1647 416 288 35 15 chrX 139314394 139314595 -27335701 - L1MB3 LINE L1 -4 6179 5975 6 1647 223 361 27 21 chrX 139315896 139316022 -27334274 - MIRc SINE MIR -77 131 8 6 1647 1227 34 7 0 chrX 139316250 139316396 -27333900 - B1_Mus2 SINE Alu 0 147 1 6 1647 486 208 6 191 chrX 139318596 139318774 -27331522 - B1_Mur1 SINE Alu 0 149 5 7 1647 465 288 0 0 chrX 139318785 139318896 -27331400 - PB1D10 SINE Alu -6 111 1 7 1647 268 270 171 38 chrX 139319061 139319212 -27331084 + MIRc SINE MIR 11 178 -90 7 1647 21 0 0 0 chrX 139319958 139319979 -27330317 + AT_rich Low_complexity Low_complexity 1 21 0 7 1647 451 355 49 4 chrX 139320729 139320995 -27329301 - Charlie7 DNA MER1_type -2273 339 62 7 1647 249 307 232 11 chrX 139321117 139321298 -27328998 - MIRb SINE MIR -15 253 33 7 1647 231 337 11 11 chrX 139322747 139322834 -27327462 - MIRc SINE MIR -25 243 157 7 1647 252 0 0 0 chrX 139325291 139325319 -27324977 + (TC)n Simple_repeat Simple_repeat 1 28 0 7 1647 198 0 0 0 chrX 139325319 139325340 -27324956 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 1647 333 0 0 0 chrX 139325340 139325376 -27324920 + (GA)n Simple_repeat Simple_repeat 2 38 0 7 1647 228 284 32 0 chrX 139325523 139325618 -27324678 + Lx6 LINE L1 7340 7437 -23 7 1647 186 43 0 0 chrX 139325628 139325651 -27324645 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 7 1647 621 274 54 18 chrX 139326087 139326310 -27323986 + MamRep434 DNA TcMar 2 232 -194 7 1647 23 0 0 0 chrX 139326399 139326422 -27323874 + AT_rich Low_complexity Low_complexity 1 23 0 7 1647 397 304 0 35 chrX 139328512 139328628 -27321668 - RSINE1 SINE B4 -52 113 2 7 1647 760 173 150 27 chrX 139328677 139328897 -27321399 - Lx9 LINE L1 -9 7635 7389 7 1647 27 0 0 0 chrX 139328912 139328939 -27321357 + AT_rich Low_complexity Low_complexity 1 27 0 7 1647 699 261 49 5 chrX 139328972 139329157 -27321139 + B3A SINE B2 2 194 -4 7 1648 443 262 0 53 chrX 139333118 139333231 -27317065 + PB1D10 SINE Alu 3 109 -8 7 1648 26 64 0 0 chrX 139334264 139334311 -27315985 + AT_rich Low_complexity Low_complexity 1 47 0 7 1648 21 0 0 0 chrX 139334376 139334397 -27315899 + AT_rich Low_complexity Low_complexity 1 21 0 7 1648 360 239 0 0 chrX 139335050 139335121 -27315175 + Lx8 LINE L1 7172 7242 -231 7 1648 219 275 56 28 chrX 139335235 139335306 -27314990 + L3 LINE CR1 927 999 -3490 7 1648 314 349 102 49 chrX 139335364 139335590 -27314706 + MIRb SINE MIR 3 240 -28 7 1648 259 336 17 0 chrX 139335747 139335866 -27314430 - Lx8 LINE L1 -181 7292 7172 7 1648 748 236 34 7 chrX 139336006 139336155 -27314141 - RSINE1 SINE B4 -10 155 3 7 1648 380 281 155 14 chrX 139336773 139336921 -27313375 + L3 LINE CR1 4302 4470 -19 7 1648 577 283 75 39 chrX 139337264 139337518 -27312778 - L2c LINE L2 -104 3283 3021 7 1648 378 0 0 0 chrX 139337847 139337889 -27312407 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1648 181 365 108 34 chrX 139338090 139338266 -27312030 - MIR SINE MIR -56 206 18 7 1648 445 339 102 24 chrX 139338374 139338630 -27311666 - L2a LINE L2 -291 3135 2860 7 1648 649 189 184 25 chrX 139340033 139340196 -27310100 + B3A SINE B2 5 193 -5 7 1648 234 105 0 0 chrX 139340768 139340806 -27309490 + (CCA)n Simple_repeat Simple_repeat 1 38 0 7 1648 1374 247 89 9 chrX 139343210 139343671 -27306625 + L1MB3 LINE L1 5678 6175 -8 7 1648 326 326 49 21 chrX 139344249 139344393 -27305903 + MIRb SINE MIR 19 166 -102 7 1648 267 337 40 50 chrX 139344465 139344665 -27305631 + Lx8 LINE L1 7146 7343 -130 7 1648 279 173 0 0 chrX 139345085 139345137 -27305159 + (TA)n Simple_repeat Simple_repeat 2 53 0 7 1648 244 239 89 89 chrX 139346860 139346961 -27303335 - L2c LINE L2 -8 3379 3279 7 1648 7671 6 0 0 chrX 139346995 139347875 -27302421 - L1Md_T LINE L1 0 6582 5731 7 1648 740 183 8 8 chrX 139348679 139348811 -27301485 + B1_Mur4 SINE Alu 19 150 0 7 1648 1861 161 41 12 chrX 139348834 139349179 -27301117 + RMER1B Other Other 712 1066 0 7 1648 218 136 23 0 chrX 139352153 139352197 -27298099 + CT-rich Low_complexity Low_complexity 1 45 0 7 1648 1148 176 15 5 chrX 139352223 139352428 -27297868 - URR1B DNA MER1_type -12 213 7 7 1648 444 308 81 30 chrX 139352428 139352457 -27297839 + CYRA11_Mm Unknown Y-chromosome 183 428 -189 7 1648 1213 48 0 0 chrX 139352854 139353000 -27297296 - B1_Mus2 SINE Alu -1 146 1 7 1648 354 242 0 0 chrX 139354625 139354691 -27295605 - ID4_ SINE ID -6 77 12 7 1648 953 296 70 9 chrX 139354728 139355154 -27295142 - L1ME1 LINE L1 -1 6178 5727 7 1648 1090 262 178 28 chrX 139355282 139355722 -27294574 - L1MA10 LINE L1 -58 6276 5796 7 1648 234 0 0 0 chrX 139355722 139355748 -27294548 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 7 1648 1090 262 178 28 chrX 139355748 139355952 -27294344 - L1MA10 LINE L1 -539 5795 5535 7 1648 1029 318 125 49 chrX 139355966 139356687 -27293609 - L1MEf LINE L1 -2501 3818 3054 7 1648 631 276 14 0 chrX 139356687 139356832 -27293464 + B1F SINE Alu 1 147 -2 7 1648 1029 318 125 49 chrX 139356832 139357538 -27292758 - L1MEf LINE L1 -3266 3053 2283 7 1648 264 213 25 62 chrX 139357639 139357719 -27292577 - B4A SINE B4 -90 202 126 7 1648 524 319 99 59 chrX 139357726 139358486 -27291810 - L1MEf LINE L1 -4606 1809 1020 7 1648 373 319 86 46 chrX 139358504 139358855 -27291441 - L1MEf LINE L1 -5485 915 551 7 1648 1163 55 0 0 chrX 139358992 139359138 -27291158 - B1_Mm SINE Alu 0 147 2 7 1648 236 245 75 62 chrX 139359234 139359395 -27290901 - L1MEf LINE L1 -6207 193 31 7 1648 197 210 0 114 chrX 139360316 139360386 -27289910 - L3 LINE CR1 -1134 3355 3294 7 1648 369 0 0 0 chrX 139360479 139360520 -27289776 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1648 3550 46 7 2 chrX 139360582 139361022 -27289274 + L1Md_F2 LINE L1 6128 6569 -13 7 1648 357 226 22 67 chrX 139361147 139361237 -27289059 + PB1D10 SINE Alu 10 95 -22 7 1648 234 281 16 0 chrX 139361180 139361244 -27289052 + MT2B LTR ERVL 194 258 -343 7 1648 283 254 0 17 chrX 139361852 139361912 -27288384 - ID4_ SINE ID -7 76 18 7 1648 240 250 13 40 chrX 139362290 139362365 -27287931 + ID4_ SINE ID 3 75 -8 7 1648 699 299 47 61 chrX 139363951 139364335 -27285961 + ORR1E LTR MaLR 8 370 0 7 1648 400 300 46 33 chrX 139365369 139365634 -27284662 - MLT1A0 LTR MaLR -57 308 3 7 1648 390 250 49 18 chrX 139365860 139366023 -27284273 + L1M3 LINE L1 2781 2948 -3195 7 1648 467 224 14 28 chrX 139366024 139366157 -27284139 + PB1D7 SINE Alu 1 128 -21 7 1648 536 230 94 40 chrX 139366226 139366621 -27283675 + L1M3 LINE L1 3081 3496 -2647 7 1648 22690 160 68 1 chrX 139366751 139371827 -27278469 + L1Md_F LINE L1 371 5790 -96 7 1648 342 170 0 0 chrX 139371830 139371883 -27278413 + L1Md_F3 LINE L1 6406 6458 -126 7 1648 1359 282 14 34 chrX 139371908 139372407 -27277889 + L1M3 LINE L1 4491 4979 -1161 7 1648 881 221 6 6 chrX 139372415 139372583 -27277713 + Lx8 LINE L1 6967 7134 -339 7 1648 1015 280 88 25 chrX 139372659 139372738 -27277558 + L1MA7 LINE L1 5681 5760 -531 7 1648 588 29 0 0 chrX 139372738 139372808 -27277488 + (TGGA)n Simple_repeat Simple_repeat 3 72 0 7 1648 1015 280 88 25 chrX 139372808 139373161 -27277135 + L1MA7 LINE L1 5761 6139 -152 7 1648 830 258 14 72 chrX 139373749 139373958 -27276338 + B3A SINE B2 2 198 0 7 1648 2834 76 5 0 chrX 139374241 139374624 -27275672 - L1Md_F2 LINE L1 0 6582 6198 7 1648 1705 20 0 0 chrX 139374624 139374825 -27275471 + L1Md_F2 LINE L1 5948 6148 -436 7 1648 225 0 0 0 chrX 139376050 139376075 -27274221 + (TAGA)n Simple_repeat Simple_repeat 4 28 0 7 1648 189 147 0 0 chrX 139377131 139377165 -27273131 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 1648 385 241 58 14 chrX 139378372 139378511 -27271785 + L1MC4a LINE L1 7735 7879 -3 7 1648 1653 250 122 57 chrX 139378600 139379335 -27270961 + L1MC1 LINE L1 5540 6322 -11 7 1648 607 234 39 0 chrX 139381474 139381602 -27268694 - B1F1 SINE Alu -13 136 4 7 1648 728 273 32 27 chrX 139381790 139382124 -27268172 - MER47B DNA MER2_type -13 405 8 7 1648 339 252 77 54 chrX 139382138 139382306 -27267990 - L1MEf LINE L1 -4604 1596 1425 7 1648 596 293 35 87 chrX 139382352 139382524 -27267772 - RSINE1 SINE B4 0 165 3 7 1648 271 349 95 30 chrX 139383919 139384223 -27266073 + Tigger12 DNA MER2_type 106 448 -1511 7 1648 587 295 24 106 chrX 139384403 139384649 -27265647 + B4 SINE B4 63 288 -4 7 1648 207 0 0 0 chrX 139384665 139384688 -27265608 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1648 666 37 0 0 chrX 139384688 139384768 -27265528 + (GA)n Simple_repeat Simple_repeat 2 82 0 7 1648 756 218 0 0 chrX 139384822 139384955 -27265341 + B1_Mus2 SINE Alu 1 133 -14 7 1648 1061 262 148 33 chrX 139385047 139385718 -27264578 - L1MA9 LINE L1 -231 6081 5334 7 1648 330 304 64 57 chrX 139385976 139386273 -27264023 - MTEb LTR MaLR -7 372 67 7 1648 1242 54 0 0 chrX 139386901 139387049 -27263247 + B1_Mus1 SINE Alu 1 148 0 7 1648 22 0 0 0 chrX 139387313 139387335 -27262961 + AT_rich Low_complexity Low_complexity 1 22 0 7 1648 797 265 54 0 chrX 139387769 139387973 -27262323 + ID_B1 SINE B4 2 216 -8 7 1648 446 285 34 27 chrX 139390349 139390497 -27259799 + B1F SINE Alu 1 149 0 7 1648 674 291 56 36 chrX 139390514 139390764 -27259532 + B4A SINE B4 36 290 -2 7 1648 197 77 51 0 chrX 139390767 139390806 -27259490 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 7 1648 186 133 0 0 chrX 139391244 139391274 -27259022 + (GGGAGA)n Simple_repeat Simple_repeat 1 30 0 7 1648 305 244 11 109 chrX 139393327 139393419 -27256877 + RSINE1 SINE B4 11 93 -72 7 1648 416 35 17 0 chrX 139393431 139393489 -27256807 + (TAAAA)n Simple_repeat Simple_repeat 3 61 0 7 1648 26 0 0 0 chrX 139393521 139393547 -27256749 + AT_rich Low_complexity Low_complexity 1 26 0 7 1648 267 54 0 0 chrX 139394721 139394758 -27255538 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1648 510 17 0 0 chrX 139394758 139394816 -27255480 + (GA)n Simple_repeat Simple_repeat 2 60 0 7 1648 22 0 0 0 chrX 139396089 139396111 -27254185 + AT_rich Low_complexity Low_complexity 1 22 0 7 1648 712 250 23 6 chrX 139397149 139397322 -27252974 + MER5A DNA MER1_type 9 184 -5 7 1648 747 173 71 7 chrX 139397333 139397473 -27252823 - MER5A1 DNA MER1_type -11 155 7 8 1648 621 256 48 18 chrX 139397587 139397754 -27252542 + MER5B DNA MER1_type 1 172 -6 8 1648 357 24 0 0 chrX 139398740 139398782 -27251514 + (TAA)n Simple_repeat Simple_repeat 1 42 0 8 1648 432 67 0 0 chrX 139400965 139401025 -27249271 + (CCG)n Simple_repeat Simple_repeat 2 61 0 8 1648 246 62 0 0 chrX 139401046 139401078 -27249218 + (CCG)n Simple_repeat Simple_repeat 3 34 0 8 1648 32 0 0 0 chrX 139401329 139401361 -27248935 + GC_rich Low_complexity Low_complexity 1 32 0 8 1648 204 40 0 0 chrX 139401562 139401587 -27248709 + (A)n Simple_repeat Simple_repeat 1 25 0 8 1648 311 335 24 72 chrX 139402800 139403009 -27247287 - MIRb SINE MIR -39 229 31 8 1648 227 260 38 94 chrX 139403014 139403120 -27247176 + BC1_Mm scRNA scRNA 2 101 -51 8 1648 387 0 0 0 chrX 139403288 139403331 -27246965 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 1648 393 284 8 57 chrX 139403334 139403457 -27246839 + PB1D10 SINE Alu 1 117 0 8 1648 192 77 0 0 chrX 139403487 139403513 -27246783 + (GGA)n Simple_repeat Simple_repeat 2 27 0 8 1648 758 262 80 9 chrX 139404120 139404332 -27245964 - AmnSINE1 SINE SINE -204 371 145 8 1648 270 0 0 0 chrX 139406463 139406493 -27243803 + (CA)n Simple_repeat Simple_repeat 1 30 0 8 1648 453 279 58 79 chrX 139406719 139407061 -27243235 - L1MB8 LINE L1 -11 6167 5833 8 1648 2437 220 31 71 chrX 139407099 139407775 -27242521 - Lx8 LINE L1 -66 7407 6759 8 1648 422 306 10 15 chrX 139407788 139407984 -27242312 - L1MB8 LINE L1 -502 5682 5488 8 1648 325 293 0 8 chrX 139407989 139408113 -27242183 - L1MB8 LINE L1 -1002 5144 5022 8 1648 434 324 45 28 chrX 139408113 139408291 -27242005 + B4 SINE B4 106 286 -6 8 1648 249 33 0 0 chrX 139408295 139408325 -27241971 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 1648 533 349 73 11 chrX 139408440 139408727 -27241569 - L2 LINE L2 -1309 2110 1806 8 1648 231 190 0 0 chrX 139409361 139409419 -27240877 + GA-rich Low_complexity Low_complexity 1 58 0 8 1648 4692 51 5 3 chrX 139409706 139410314 -27239982 - L1Md_F2 LINE L1 -125 6457 5849 8 1648 346 284 21 21 chrX 139410314 139410411 -27239885 - MLT1J1 LTR MaLR -310 134 38 8 1648 363 329 34 27 chrX 139410488 139410502 -27239794 - B1_Mus1 SINE Alu 0 148 136 8 1648 243 88 0 0 chrX 139410502 139410536 -27239760 + (ATTG)n Simple_repeat Simple_repeat 2 35 0 8 1648 363 329 34 27 chrX 139410536 139410668 -27239628 - B1_Mus1 SINE Alu -13 135 1 8 1648 617 296 2 2 chrX 139410668 139410702 -27239594 - ID SINE ID -143 81 52 8 1648 213 139 28 0 chrX 139410723 139410759 -27239537 + L2c LINE L2 3339 3375 -12 8 1648 267 359 41 59 chrX 139410847 139411016 -27239280 - MIRb SINE MIR -12 256 91 8 1648 231 301 96 0 chrX 139411334 139411407 -27238889 + MTEb LTR MaLR 277 356 -23 8 1648 332 272 105 14 chrX 139411704 139411913 -27238383 - L1MB8 LINE L1 -3231 2915 2688 8 1648 478 305 47 58 chrX 139411925 139412287 -27238009 - L1MB8 LINE L1 -3505 2641 2284 8 1648 278 346 0 10 chrX 139412357 139412459 -27237837 - PB1D10 SINE Alu -12 105 5 8 1648 25 51 0 0 chrX 139412501 139412540 -27237756 + AT_rich Low_complexity Low_complexity 1 39 0 8 1648 319 330 104 0 chrX 139412564 139412670 -27237626 + PB1D9 SINE Alu 1 117 -3 8 1648 369 0 0 0 chrX 139412808 139412849 -27237447 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 8 1648 217 244 0 0 chrX 139412853 139412894 -27237402 + (CATA)n Simple_repeat Simple_repeat 2 42 0 8 1648 643 324 49 14 chrX 139414202 139414490 -27235806 + MER5C DNA MER1_type 1 298 -15 8 1648 388 241 152 45 chrX 139414559 139414802 -27235494 - Lx9 LINE L1 -5 7639 7371 8 1648 6408 173 49 5 chrX 139415513 139416691 -27233605 + Lx5 LINE L1 5805 7034 -16 8 1648 222 62 0 0 chrX 139416691 139416723 -27233573 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 8 1648 287 25 0 24 chrX 139416803 139416844 -27233452 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 8 1648 1087 67 0 0 chrX 139416844 139416978 -27233318 - B1_Mus2 SINE Alu -13 134 1 8 1648 1997 20 20 8 chrX 139417042 139417288 -27233008 - L1Md_F3 LINE L1 -2 6582 6334 8 1648 244 187 37 74 chrX 139417599 139417680 -27232616 + CT-rich Low_complexity Low_complexity 3 80 0 8 1648 457 304 204 4 chrX 139417819 139418083 -27232213 - Lx8 LINE L1 -232 7241 6925 8 1648 212 405 8 16 chrX 139418110 139418164 -27232132 - ID_B1 SINE B4 0 224 98 8 1648 222 347 0 27 chrX 139418164 139418238 -27232058 - PB1D10 SINE Alu -29 88 17 8 1648 317 343 131 88 chrX 139418706 139419295 -27231001 + MamGypLTR1b LTR Gypsy 169 782 0 8 1648 913 307 62 3 chrX 139419733 139420019 -27230277 + Tigger7 DNA MER2_type 1 319 -2172 8 1648 244 295 0 0 chrX 139420237 139420298 -27229998 + MIRc SINE MIR 96 156 -112 8 1648 185 327 0 0 chrX 139420509 139420561 -27229735 + MIRb SINE MIR 213 264 -4 8 1648 180 344 47 47 chrX 139420712 139420776 -27229520 - MIRm SINE MIR -2 274 211 8 1648 191 316 18 0 chrX 139420894 139420951 -27229345 - L2a LINE L2 -244 3182 3125 8 1648 485 309 7 35 chrX 139421350 139421494 -27228802 + ID_B1 SINE B4 73 212 -12 8 1648 2919 267 35 60 chrX 139421906 139422279 -27228017 - Lx9 LINE L1 -76 7568 7211 8 1648 824 171 0 46 chrX 139422279 139422432 -27227864 + B1_Mus1 SINE Alu 3 148 0 8 1648 2919 267 35 60 chrX 139422432 139423117 -27227179 - Lx9 LINE L1 -434 7210 6536 8 1648 506 275 123 38 chrX 139423162 139423374 -27226922 + MIRb SINE MIR 38 267 -1 8 1648 1333 221 70 10 chrX 139423591 139423989 -27226307 + L1MB3 LINE L1 5460 5881 -302 8 1648 252 0 0 0 chrX 139423996 139424024 -27226272 + (TC)n Simple_repeat Simple_repeat 1 28 0 8 1648 369 0 0 0 chrX 139424024 139424064 -27226232 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 1648 601 245 242 29 chrX 139424092 139424332 -27225964 + B4A SINE B4 2 292 0 8 1648 803 277 11 46 chrX 139424379 139424663 -27225633 + L1MB3 LINE L1 5893 6166 -17 8 1648 598 174 9 0 chrX 139425534 139425643 -27224653 + ID_B1 SINE B4 115 224 0 8 1648 848 163 65 38 chrX 139426152 139426337 -27223959 + B2_Mm2 SINE B2 1 190 -5 8 1648 182 333 14 14 chrX 139426421 139426491 -27223805 + MIRc SINE MIR 56 125 -143 8 1648 478 277 0 57 chrX 139426768 139426925 -27223371 + RSINE1 SINE B4 3 150 -15 8 1648 360 0 0 0 chrX 139426942 139426982 -27223314 + (TC)n Simple_repeat Simple_repeat 1 40 0 8 1648 207 0 0 0 chrX 139426982 139427004 -27223292 + (CA)n Simple_repeat Simple_repeat 1 23 0 8 1648 285 23 0 0 chrX 139427029 139427078 -27223218 - L1_Mus1 LINE L1 -7 6560 6523 8 1648 1773 79 12 0 chrX 139427075 139427316 -27222980 - L1_Mus3 LINE L1 -111 6527 6284 8 1648 275 325 103 40 chrX 139427345 139427543 -27222753 + MIRc SINE MIR 23 245 -23 8 1648 342 0 0 0 chrX 139427731 139427769 -27222527 + (T)n Simple_repeat Simple_repeat 1 38 0 8 1648 185 265 0 39 chrX 139430603 139430654 -27219642 - MIRc SINE MIR -52 216 168 8 1648 526 316 75 28 chrX 139431161 139431373 -27218923 + MTEa LTR MaLR 1 222 -157 8 1648 235 246 0 32 chrX 139431498 139431561 -27218735 - MIR SINE MIR -37 225 165 8 1648 220 320 38 25 chrX 139432101 139432181 -27218115 - PB1D9 SINE Alu -11 109 29 8 1648 238 259 44 11 chrX 139432183 139432273 -27218023 + L1M3 LINE L1 5230 5322 -818 8 1648 974 259 62 83 chrX 139432308 139432940 -27217356 + L1MA7 LINE L1 5452 6017 -283 8 1648 22 35 0 0 chrX 139433198 139433227 -27217069 + AT_rich Low_complexity Low_complexity 1 29 0 8 1648 559 183 0 0 chrX 139433243 139433336 -27216960 + B1_Mur2 SINE Alu 37 129 -20 8 1648 250 273 123 35 chrX 139434620 139434734 -27215562 - MIRb SINE MIR -6 262 139 8 1648 267 282 26 26 chrX 139435029 139435142 -27215154 - MIR SINE MIR -46 216 104 8 1648 473 149 262 0 chrX 139435484 139435591 -27214705 - ORR1C1 LTR MaLR 0 378 244 8 1648 505 136 101 11 chrX 139435579 139435668 -27214628 + B1_Mur3 SINE Alu 47 143 -6 8 1648 190 343 36 81 chrX 139435721 139435832 -27214464 - MIRm SINE MIR -157 119 14 8 1648 230 364 48 24 chrX 139436175 139436299 -27213997 + Charlie17a DNA MER1_type 1 127 -92 8 1648 554 306 0 7 chrX 139436755 139436903 -27213393 + RSINE1 SINE B4 2 148 -17 8 1648 351 0 0 0 chrX 139436912 139436951 -27213345 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 1648 580 288 0 8 chrX 139437091 139437224 -27213072 - RSINE1 SINE B4 -31 134 3 8 1648 199 438 12 0 chrX 139437299 139437461 -27212835 - L2 LINE L2 -679 2740 2577 8 1648 1174 310 82 38 chrX 139437498 139438081 -27212215 + L2a LINE L2 2294 2902 -517 8 1648 288 77 0 0 chrX 139438090 139438129 -27212167 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 1648 258 395 9 0 chrX 139438416 139438525 -27211771 - Cheshire DNA MER1_type -2139 281 172 8 1648 278 323 99 50 chrX 139438597 139438698 -27211598 + L2a LINE L2 3299 3404 -22 8 1648 276 410 6 17 chrX 139439402 139439583 -27210713 - MIRb SINE MIR -9 259 81 8 1648 434 241 64 50 chrX 139440199 139440339 -27209957 - MIRb SINE MIR -52 216 75 8 1648 417 303 60 52 chrX 139440346 139440568 -27209728 - MLT1C LTR MaLR 0 467 261 8 1648 363 285 12 168 chrX 139441487 139441612 -27208684 + MER5A DNA MER1_type 44 162 -27 8 1648 429 20 0 0 chrX 139441612 139441662 -27208634 + (TA)n Simple_repeat Simple_repeat 2 51 0 8 1648 363 285 12 168 chrX 139441662 139441709 -27208587 + MER5A DNA MER1_type 163 189 0 8 1648 180 320 13 26 chrX 139442928 139443005 -27207291 + L2a LINE L2 1080 1155 -2264 8 1648 695 348 195 5 chrX 139443009 139443618 -27206678 + L2a LINE L2 1437 2161 -1258 8 1648 2531 63 0 12 chrX 139443756 139444091 -27206205 - L1Md_F2 LINE L1 0 6582 6252 8 1648 728 271 69 20 chrX 139444109 139444312 -27205984 + Lx8 LINE L1 7252 7464 -9 8 1648 286 353 140 6 chrX 139444417 139444588 -27205708 + L2a LINE L2 2526 2719 -700 8 1648 536 311 156 41 chrX 139444613 139445166 -27205130 + L2a LINE L2 2821 3425 -1 8 1648 516 298 0 7 chrX 139446223 139446375 -27203921 - L3 LINE CR1 -613 3876 3726 8 1648 274 312 15 138 chrX 139447083 139447213 -27203083 + L2b LINE L2 3262 3375 0 8 1648 278 328 61 8 chrX 139447618 139447750 -27202546 - MIRc SINE MIR -102 166 28 8 1648 962 157 170 45 chrX 139448044 139448244 -27202052 - URR1A DNA MER1_type -1 225 1 8 1648 183 42 0 0 chrX 139448708 139448732 -27201564 + (CAATA)n Simple_repeat Simple_repeat 4 27 0 9 1648 235 321 44 18 chrX 139450023 139450137 -27200159 + L2 LINE L2 2672 2788 -631 9 1648 932 26 9 0 chrX 139450378 139450493 -27199803 + (TTCCC)n Simple_repeat Simple_repeat 2 117 0 9 1648 213 65 0 0 chrX 139450493 139450524 -27199772 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 9 1648 795 255 88 34 chrX 139450935 139451320 -27198976 - Charlie1b DNA MER1_type -34 489 84 9 1648 531 264 0 89 chrX 139451355 139451534 -27198762 - RSINE1 SINE B4 0 165 3 9 1648 495 160 32 0 chrX 139452052 139452146 -27198150 - PB1D9 SINE Alu -6 114 18 9 1648 316 239 32 21 chrX 139452155 139452249 -27198047 + MIRb SINE MIR 111 205 -63 9 1648 186 43 0 0 chrX 139453230 139453253 -27197043 + (TTG)n Simple_repeat Simple_repeat 2 24 0 9 1648 200 308 58 93 chrX 139453610 139453782 -27196514 - MIRb SINE MIR -23 245 80 9 1648 294 29 0 0 chrX 139454123 139454158 -27196138 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 9 1648 378 108 0 0 chrX 139454291 139454356 -27195940 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 9 1648 305 317 70 37 chrX 139456391 139456613 -27193683 + MIR SINE MIR 4 243 -25 9 1648 406 294 87 27 chrX 139456669 139456854 -27193442 + B4A SINE B4 1 196 -96 9 1648 383 0 0 21 chrX 139456860 139456908 -27193388 + (TAA)n Simple_repeat Simple_repeat 2 48 0 9 1648 315 0 0 0 chrX 139456965 139457000 -27193296 + (CA)n Simple_repeat Simple_repeat 1 35 0 9 1648 221 371 48 8 chrX 139457570 139457695 -27192601 + MIR SINE MIR 2 131 -131 9 1648 845 273 60 71 chrX 139457798 139458260 -27192036 - L1MB8 LINE L1 -45 6139 5678 9 1648 574 162 30 0 chrX 139458260 139458359 -27191937 - B1_Mur2 SINE Alu -2 147 46 9 1648 1859 206 28 31 chrX 139458393 139458924 -27191372 - L1MB8 LINE L1 -495 5689 5161 9 1648 208 271 122 103 chrX 139459064 139459171 -27191125 - L2b LINE L2 -49 3326 3218 9 25 7842 33 2 0 chrX 139459904 139460810 -27189486 - L1Md_T LINE L1 0 6582 5675 9 1649 12263 19 3 0 chrX 139460807 139462200 -27188096 + L1Md_T LINE L1 4297 5693 -190 9 1649 850 161 14 7 chrX 139462229 139462373 -27187923 - B1_Mur3 SINE Alu -4 145 1 9 1649 419 278 57 44 chrX 139462578 139462736 -27187560 - MER5A DNA MER1_type -24 165 6 9 1649 31 0 0 0 chrX 139462910 139462941 -27187355 + AT_rich Low_complexity Low_complexity 1 31 0 9 1649 1203 68 0 0 chrX 139462941 139463089 -27187207 - B1_Mus1 SINE Alu 0 148 1 9 1649 227 213 21 0 chrX 139463331 139463378 -27186918 + GA-rich Low_complexity Low_complexity 4 51 0 9 1649 651 296 234 12 chrX 139464093 139464435 -27185861 - MER47B DNA MER2_type 0 418 1 9 1649 289 279 174 19 chrX 139464435 139464596 -27185700 - Charlie26a DNA MER1_type -122 203 18 9 1649 405 220 11 11 chrX 139464868 139464960 -27185336 + PB1D10 SINE Alu 25 116 -1 9 1649 380 303 125 47 chrX 139467026 139467304 -27182992 + B4 SINE B4 6 274 -18 9 1649 218 254 186 23 chrX 139467493 139467680 -27182616 - MIR SINE MIR -38 230 4 9 1649 456 19 0 0 chrX 139468203 139468256 -27182040 + (TG)n Simple_repeat Simple_repeat 2 54 0 9 1649 287 340 0 28 chrX 139468257 139468363 -27181933 - PB1D7 SINE Alu 0 120 18 9 1649 376 218 38 13 chrX 139468437 139468516 -27181780 - ID4_ SINE ID -2 81 1 9 1649 249 209 0 0 chrX 139469506 139469573 -27180723 + CT-rich Low_complexity Low_complexity 2 68 0 9 1649 226 288 0 0 chrX 139469584 139469643 -27180653 - PB1D10 SINE Alu -19 98 40 9 1649 302 255 140 40 chrX 139469821 139470021 -27180275 - L1MC5 LINE L1 -50 7911 7692 9 1649 196 281 42 34 chrX 139470249 139470378 -27179918 - MIR SINE MIR -118 144 11 9 1649 387 60 0 0 chrX 139470794 139470844 -27179452 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 1649 7669 53 34 2 chrX 139472179 139473309 -27176987 - L1_Mus2 LINE L1 -1 6565 5405 9 1649 228 270 0 0 chrX 139473329 139473392 -27176904 - MIRc SINE MIR -123 145 83 9 1649 344 299 23 23 chrX 139473604 139473734 -27176562 + MER117 DNA MER1_type 2 131 -66 9 1649 392 296 63 8 chrX 139475166 139475292 -27175004 + RSINE1 SINE B4 9 141 -24 9 1649 297 0 0 0 chrX 139475306 139475339 -27174957 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 9 1649 215 350 0 48 chrX 139475350 139475434 -27174862 + ID4 SINE ID 4 83 0 9 1649 995 112 9 15 chrX 139475434 139475765 -27174531 + (GGA)n Simple_repeat Simple_repeat 1 328 0 9 1649 236 267 136 19 chrX 139476366 139476469 -27173827 + MLT1A0 LTR MaLR 248 362 -3 9 1649 423 264 14 72 chrX 139476622 139476761 -27173535 + B1F SINE Alu 3 133 -16 9 1649 371 365 13 40 chrX 139476824 139476975 -27173321 + MLT-int LTR MaLR 1106 1252 -483 9 1649 919 334 68 25 chrX 139477101 139477619 -27172677 + MLT-int LTR MaLR 149 735 -1000 9 1649 592 182 7 7 chrX 139477687 139477825 -27172471 + CT-rich Low_complexity Low_complexity 1 138 0 9 1649 1633 175 108 6 chrX 139477832 139478183 -27172113 + MTD LTR MaLR 30 416 -3 9 1649 366 389 39 56 chrX 139478308 139478542 -27171754 + MLT-int LTR MaLR 1184 1413 -322 9 1649 207 100 0 0 chrX 139478595 139478625 -27171671 + (TTTTC)n Simple_repeat Simple_repeat 5 34 0 9 1649 986 65 0 21 chrX 139478625 139478767 -27171529 - B1_Mus1 SINE Alu 0 148 10 9 1649 305 301 11 0 chrX 139478771 139478864 -27171432 + MLT-int LTR MaLR 1427 1520 -215 9 1649 667 134 0 0 chrX 139479205 139479317 -27170979 - B1_Mur4 SINE Alu -37 113 2 9 1649 324 261 94 17 chrX 139479387 139479406 -27170890 - PB1 SINE Alu -1 126 108 9 1649 186 43 0 0 chrX 139479406 139479429 -27170867 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 9 1649 417 261 94 17 chrX 139479429 139479526 -27170770 - PB1D10 SINE Alu -20 107 1 9 1649 405 345 79 17 chrX 139479543 139479720 -27170576 - MER58A DNA MER1_type -28 196 9 9 1649 287 371 35 0 chrX 139479774 139479890 -27170406 - B1F1 SINE Alu -29 120 1 9 1649 212 294 88 0 chrX 139479832 139479900 -27170396 - B4A SINE B4 -146 146 73 9 1649 230 282 0 25 chrX 139480154 139480234 -27170062 + PB1D10 SINE Alu 40 117 0 9 1649 200 386 0 0 chrX 139481854 139481924 -27168372 + (TG)n Simple_repeat Simple_repeat 2 71 0 9 1649 227 306 0 0 chrX 139481895 139481957 -27168339 + (CA)n Simple_repeat Simple_repeat 1 62 0 9 1649 252 115 50 25 chrX 139481959 139482039 -27168257 + (CAGAGA)n Simple_repeat Simple_repeat 2 83 0 9 1649 576 322 39 9 chrX 139482137 139482366 -27167930 + MER46C DNA MER2_type 13 248 -90 9 1649 872 154 12 0 chrX 139483059 139483228 -27167068 + CT-rich Low_complexity Low_complexity 3 173 0 9 1649 210 342 33 41 chrX 139484140 139484262 -27166034 - MIRb SINE MIR -70 198 78 9 1649 284 297 8 99 chrX 139484516 139484647 -27165649 + L2c LINE L2 3269 3387 0 9 1649 201 39 0 0 chrX 139485041 139485067 -27165229 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 9 1649 444 62 0 0 chrX 139485446 139485510 -27164786 + (TC)n Simple_repeat Simple_repeat 2 65 0 9 1649 453 19 0 0 chrX 139485510 139485564 -27164732 + (CA)n Simple_repeat Simple_repeat 1 54 0 9 1649 551 138 107 27 chrX 139485564 139485676 -27164620 - B1_Mus1 SINE Alu -19 129 9 9 1649 285 262 0 15 chrX 139486212 139486278 -27164018 + MER20B DNA MER1_type 1 65 -718 9 1649 363 324 62 23 chrX 139486525 139486702 -27163594 + MER20B DNA MER1_type 446 629 -154 9 1649 201 39 0 0 chrX 139486816 139486842 -27163454 + (TG)n Simple_repeat Simple_repeat 1 26 0 9 1649 943 123 12 6 chrX 139487574 139487737 -27162559 + (TTCC)n Simple_repeat Simple_repeat 1 164 0 9 1649 284 254 0 0 chrX 139487771 139487826 -27162470 - ID4_ SINE ID -27 56 2 9 1649 348 259 12 0 chrX 139488397 139488482 -27161814 + RSINE1 SINE B4 37 122 -43 9 1649 234 218 0 35 chrX 139488483 139488540 -27161756 + C-rich Low_complexity Low_complexity 2 56 0 9 1649 1136 101 0 0 chrX 139489292 139489441 -27160855 - B1_Mur4 SINE Alu 0 150 2 9 1649 4553 124 83 14 chrX 139489951 139490815 -27159481 + MTB_Mm-int LTR MaLR 335 1258 0 9 1649 1510 173 86 21 chrX 139490815 139491152 -27159144 + MTB_Mm LTR MaLR 1 359 -48 9 1649 255 69 16 49 chrX 139491196 139491257 -27159039 + (CAAAAA)n Simple_repeat Simple_repeat 1 59 0 9 1649 629 284 49 34 chrX 139491299 139491627 -27158669 - MER47B DNA MER2_type -11 407 11 9 1649 216 336 83 9 chrX 139491716 139491824 -27158472 + L2a LINE L2 3271 3386 -40 9 1649 328 263 39 95 chrX 139491960 139492168 -27158128 + L1M5 LINE L1 5380 5579 -545 9 1649 1221 48 0 0 chrX 139492257 139492403 -27157893 + B1_Mus2 SINE Alu 2 147 0 9 1649 459 92 0 0 chrX 139492403 139492468 -27157828 + (A)n Simple_repeat Simple_repeat 1 65 0 9 1649 354 250 0 12 chrX 139492568 139492653 -27157643 + B4A SINE B4 1 84 -208 9 1649 447 286 63 39 chrX 139493507 139493842 -27156454 + L2 LINE L2 460 802 -2617 9 1649 415 281 49 63 chrX 139494076 139494280 -27156016 - MIRb SINE MIR -31 237 39 9 1649 379 321 29 23 chrX 139494619 139494791 -27155505 - MIRb SINE MIR 0 268 96 9 1649 301 338 14 60 chrX 139495131 139495348 -27154948 + L2c LINE L2 3179 3385 -2 9 1649 381 58 0 0 chrX 139495969 139496021 -27154275 + (TGG)n Simple_repeat Simple_repeat 2 53 0 9 1649 490 323 57 4 chrX 139496536 139496766 -27153530 - MIR SINE MIR -5 257 16 9 1649 392 265 45 22 chrX 139497603 139497781 -27152515 - MIRc SINE MIR -70 198 19 9 1649 185 125 0 0 chrX 139499192 139499224 -27151072 - MIRb SINE MIR -18 250 219 9 1649 355 336 118 37 chrX 139499323 139499703 -27150593 + L2a LINE L2 2986 3396 -30 9 1649 202 154 0 0 chrX 139499960 139499999 -27150297 - MIR SINE MIR -14 248 210 9 1649 519 252 0 27 chrX 139500010 139500157 -27150139 - MIRb SINE MIR -67 201 59 1 1649 240 294 0 0 chrX 139500253 139500321 -27149975 - ID4_ SINE ID -1 82 15 2 1649 252 139 23 0 chrX 139502165 139502208 -27148088 + MIRb SINE MIR 217 260 -8 3 1649 662 60 10 0 chrX 139502910 139503010 -27147286 + (CA)n Simple_repeat Simple_repeat 2 102 0 4 1649 242 220 53 62 chrX 139503676 139503757 -27146539 - PB1D10 SINE Alu -56 93 18 5 1649 675 179 73 15 chrX 139503780 139503916 -27146380 - ID_B1 SINE B4 0 224 81 6 1649 444 306 63 34 chrX 139504041 139504247 -27146049 - MIRb SINE MIR -15 253 42 7 1649 275 233 33 13 chrX 139504371 139504523 -27145773 + CT-rich Low_complexity Low_complexity 3 157 0 8 1649 331 279 26 18 chrX 139504948 139505054 -27145242 + B1F2 SINE Alu 34 140 -9 9 1649 249 33 0 0 chrX 139505054 139505084 -27145212 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 1649 495 87 0 0 chrX 139505802 139505871 -27144425 + (CA)n Simple_repeat Simple_repeat 1 69 0 1 1649 218 198 22 0 chrX 139505873 139505964 -27144332 + (CAGAGA)n Simple_repeat Simple_repeat 2 94 0 1 1649 375 313 47 52 chrX 139505970 139506162 -27144134 + HAL1-3A_ME LINE L1 1975 2165 -693 1 1649 598 212 6 136 chrX 139506700 139506869 -27143427 - B1_Mur1 SINE Alu -2 147 1 1 1649 1368 67 0 0 chrX 139507338 139507518 -27142778 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 1 1649 735 95 0 0 chrX 139507519 139507624 -27142672 + (TTCCC)n Simple_repeat Simple_repeat 1 105 0 1 1649 1095 244 14 0 chrX 139507634 139507851 -27142445 - ID_B1 SINE B4 0 224 5 1 1649 264 77 0 0 chrX 139507862 139507901 -27142395 + (CAA)n Simple_repeat Simple_repeat 2 40 0 1 1649 586 319 19 0 chrX 139507924 139508084 -27142212 - RSINE1 SINE B4 0 165 3 1 1649 1129 268 43 24 chrX 139508396 139508725 -27141571 - Lx8 LINE L1 -45 7428 7094 2 1649 1286 131 49 5 chrX 139508945 139509168 -27141128 - L1_Mus3 LINE L1 -4 6634 6402 2 1649 1967 51 4 0 chrX 139509168 139509402 -27140894 + L1_Mus2 LINE L1 6148 6382 -184 2 1649 291 241 253 33 chrX 139509447 139509597 -27140699 + MER5A DNA MER1_type 2 184 -5 2 1649 577 235 58 19 chrX 139509614 139509770 -27140526 + MER5B DNA MER1_type 17 178 0 2 1649 324 0 0 0 chrX 139510344 139510380 -27139916 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1649 533 347 0 6 chrX 139510380 139510551 -27139745 - B4A SINE B4 -23 269 100 2 1649 310 352 91 20 chrX 139510863 139511063 -27139233 - L2b LINE L2 -2 3385 3185 2 1649 704 328 16 8 chrX 139511067 139511316 -27138980 + B4A SINE B4 6 256 -36 2 1649 318 341 52 29 chrX 139511308 139511444 -27138852 - MER45A DNA Tip100 -26 152 14 2 1649 748 247 13 0 chrX 139512055 139512213 -27138083 - L1MEd LINE L1 -5397 722 563 3 1649 659 253 13 0 chrX 139512442 139512596 -27137700 - B3 SINE B2 0 216 61 3 1649 318 50 0 0 chrX 139512727 139512767 -27137529 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1649 383 259 47 67 chrX 139512768 139512917 -27137379 - RSINE1 SINE B4 -15 150 5 3 1649 1740 211 78 25 chrX 139513496 139513894 -27136402 + MTD LTR MaLR 1 419 0 3 1649 213 293 13 0 chrX 139515784 139515859 -27134437 - MIR SINE MIR -65 143 68 3 1649 408 20 0 0 chrX 139516402 139516451 -27133845 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1649 36 0 0 0 chrX 139517864 139517900 -27132396 + AT_rich Low_complexity Low_complexity 1 36 0 3 1649 222 37 0 0 chrX 139518279 139518306 -27131990 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1649 280 306 0 0 chrX 139518384 139518456 -27131840 + ID2 SINE ID 2 73 -10 3 1649 295 286 23 70 chrX 139518529 139518657 -27131639 - MIR SINE MIR -15 247 126 4 1649 252 298 0 0 chrX 139519047 139519104 -27131192 + (CGTG)n Simple_repeat Simple_repeat 1 57 0 4 1649 375 60 0 0 chrX 139519216 139519266 -27131030 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1649 452 312 74 21 chrX 139520331 139520521 -27129775 - MIRb SINE MIR -16 252 53 4 1649 189 121 0 0 chrX 139521979 139522012 -27128284 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 1649 528 16 0 0 chrX 139523072 139523133 -27127163 + (GA)n Simple_repeat Simple_repeat 1 61 0 4 1649 353 292 8 34 chrX 139523984 139524101 -27126195 + MIRc SINE MIR 57 170 -98 4 1649 407 284 190 47 chrX 139524406 139524664 -27125632 - MER46C DNA MER2_type -41 297 3 4 1649 234 280 11 99 chrX 139524684 139524775 -27125521 + PB1D10 SINE Alu 2 84 -33 4 1649 414 0 0 0 chrX 139524807 139524853 -27125443 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1649 477 308 21 21 chrX 139524905 139525094 -27125202 - MIR SINE MIR -61 201 13 5 1649 407 327 0 0 chrX 139525146 139525259 -27125037 + RSINE1 SINE B4 2 114 -51 5 1649 928 293 69 7 chrX 139525274 139525580 -27124716 - MER102b DNA MER1_type -16 325 1 5 1649 838 255 17 118 chrX 139525823 139526179 -27124117 + MLT1M LTR MaLR 1 320 -352 5 1649 454 269 0 0 chrX 139526410 139526514 -27123782 + PB1D7 SINE Alu 17 120 0 5 1649 21 0 0 0 chrX 139527741 139527762 -27122534 + GC_rich Low_complexity Low_complexity 1 21 0 5 1649 464 238 64 64 chrX 139527774 139527994 -27122302 + Charlie18a DNA MER1_type 74 293 -49 5 1649 369 339 34 45 chrX 139528089 139528268 -27122028 - L3 LINE CR1 -1281 3208 3032 5 1649 314 273 0 0 chrX 139528416 139528493 -27121803 - L3 LINE CR1 -255 4234 4158 5 1649 389 310 92 62 chrX 139528514 139528741 -27121555 + MIRb SINE MIR 26 259 -9 5 1649 189 0 0 0 chrX 139528811 139528832 -27121464 + (TG)n Simple_repeat Simple_repeat 1 21 0 6 1649 238 270 59 20 chrX 139529885 139529987 -27120309 - L1ME4a LINE L1 -38 6086 5981 6 1649 25 51 0 0 chrX 139530007 139530046 -27120250 + AT_rich Low_complexity Low_complexity 1 39 0 6 1649 243 294 83 0 chrX 139530067 139530176 -27120120 - PB1D7 SINE Alu 0 120 3 6 1649 428 263 45 13 chrX 139530370 139530524 -27119772 + MIR SINE MIR 78 236 -26 6 1649 192 77 0 0 chrX 139530614 139530640 -27119656 + (TTA)n Simple_repeat Simple_repeat 2 27 0 6 1649 274 333 23 91 chrX 139530644 139530776 -27119520 - RSINE1 SINE B4 0 165 43 6 1649 613 269 127 55 chrX 139530956 139531286 -27119010 - ORR1E LTR MaLR -5 354 1 6 1649 199 371 21 14 chrX 139531292 139531437 -27118859 + MIRb SINE MIR 122 267 -1 6 1649 573 61 0 0 chrX 139538418 139538500 -27111796 + (GA)n Simple_repeat Simple_repeat 1 82 0 6 1649 552 203 39 0 chrX 139539724 139539852 -27110444 + L1ME4a LINE L1 5992 6124 0 7 1649 451 271 65 59 chrX 139539936 139540089 -27110207 - RSINE1 SINE B4 0 165 12 7 1649 372 381 7 0 chrX 139541184 139541323 -27108973 - LTR88a LTR Gypsy -10 806 667 7 1649 430 317 101 101 chrX 139541501 139541753 -27108543 + ORR1E LTR MaLR 2 256 -103 7 1649 1925 129 29 73 chrX 139541753 139542096 -27108200 - ORR1A4 LTR MaLR -1 328 1 7 1649 430 317 101 101 chrX 139542096 139542201 -27108095 + ORR1E LTR MaLR 257 359 0 7 1649 233 235 0 0 chrX 139542293 139542344 -27107952 - MIR SINE MIR -118 144 94 7 1649 1250 181 23 86 chrX 139542365 139542413 -27107883 - ORR1C1 LTR MaLR -14 364 324 7 1649 1128 82 0 0 chrX 139542413 139542559 -27107737 - B1_Mus1 SINE Alu 0 148 3 7 1649 1250 181 23 86 chrX 139542559 139542812 -27107484 - ORR1C1 LTR MaLR -55 323 82 7 1649 8072 56 0 7 chrX 139543549 139544540 -27105756 + L1Md_F2 LINE L1 5587 6570 -12 7 1649 456 295 50 7 chrX 139544844 139544984 -27105312 + RSINE1 SINE B4 4 149 -16 7 1649 299 340 10 0 chrX 139545021 139545121 -27105175 - U6 snRNA snRNA -1 106 6 8 1649 3300 36 8 0 chrX 139545384 139545775 -27104521 - L1_Mus1 LINE L1 -532 6035 5642 8 1649 4213 50 29 2 chrX 139545775 139546292 -27104004 + L1_Mus1 LINE L1 6037 6567 0 8 1649 1301 198 4 23 chrX 139546292 139546324 -27103972 - L1_Mur3 LINE L1 -241 5639 5610 8 1649 885 253 26 0 chrX 139546344 139546577 -27103719 - L1MB8 LINE L1 -189 5989 5751 8 1649 357 218 0 22 chrX 139547042 139547131 -27103165 + MIRb SINE MIR 46 132 -136 8 1649 843 287 41 30 chrX 139547733 139548002 -27102294 + Lx5 LINE L1 6776 7047 -3 8 1649 352 172 11 11 chrX 139548018 139548106 -27102190 + GA-rich Low_complexity Low_complexity 4 91 0 8 1649 414 0 0 0 chrX 139548210 139548256 -27102040 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1649 449 276 191 25 chrX 139548600 139548804 -27101492 + Tigger5 DNA MER2_type 1 238 -2168 8 1649 848 238 49 61 chrX 139549223 139549550 -27100746 + MER33 DNA MER1_type 2 324 0 8 1649 378 0 0 0 chrX 139550144 139550186 -27100110 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 9 1649 300 237 12 31 chrX 139550393 139550554 -27099742 + GA-rich Low_complexity Low_complexity 2 159 0 9 1649 474 49 0 0 chrX 139550591 139550652 -27099644 + (CA)n Simple_repeat Simple_repeat 2 62 0 9 1649 279 354 0 10 chrX 139550989 139551089 -27099207 - Lx8 LINE L1 -848 6625 6527 9 1649 2063 233 73 34 chrX 139551078 139551363 -27098933 + Lx8 LINE L1 6591 6874 -599 9 1649 374 114 14 0 chrX 139551363 139551433 -27098863 + (CA)n Simple_repeat Simple_repeat 2 72 0 9 1649 2063 251 285 24 chrX 139551433 139551871 -27098425 + Lx8 LINE L1 6875 7440 -33 9 1649 441 151 0 0 chrX 139552290 139552376 -27097920 + T-rich Low_complexity Low_complexity 1 86 0 9 1649 1230 34 7 0 chrX 139552378 139552524 -27097772 - B1_Mus1 SINE Alu 0 148 2 9 1649 471 246 83 15 chrX 139553308 139553440 -27096856 - B1F1 SINE Alu 0 149 9 9 1649 856 293 27 74 chrX 139553912 139554290 -27096006 + ORR1E LTR MaLR 3 379 0 9 1649 487 351 28 28 chrX 139554750 139554929 -27095367 + B3A SINE B2 4 182 -16 1 1649 25 0 0 0 chrX 139555603 139555628 -27094668 + AT_rich Low_complexity Low_complexity 1 25 0 1 1649 3172 71 2 0 chrX 139555660 139556067 -27094229 - L1_Mus2 LINE L1 0 6566 6159 1 1649 279 54 0 0 chrX 139556206 139556243 -27094053 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 1 1649 294 269 76 138 chrX 139556386 139556610 -27093686 + MLT1A LTR MaLR 4 213 -195 1 1649 227 250 12 24 chrX 139556680 139556762 -27093534 + CT-rich Low_complexity Low_complexity 1 81 0 1 1649 273 289 93 0 chrX 139556763 139556860 -27093436 - ID_B1 SINE B4 -3 221 116 1 1649 249 304 16 104 chrX 139557045 139557170 -27093126 + MLT1D LTR MaLR 30 143 -362 1 1649 37 39 0 0 chrX 139557321 139557372 -27092924 + AT_rich Low_complexity Low_complexity 1 51 0 1 1649 492 62 0 0 chrX 139557490 139557554 -27092742 + (TG)n Simple_repeat Simple_repeat 2 65 0 1 1649 267 218 181 44 chrX 139558868 139559050 -27091246 - L1M3e LINE L1 -2119 4984 4778 1 1649 3437 223 48 9 chrX 139559162 139560273 -27090023 - L1M3e LINE L1 -2334 4769 3616 1 1649 579 29 0 0 chrX 139560273 139560342 -27089954 + (TC)n Simple_repeat Simple_repeat 2 70 0 1 1649 265 253 13 13 chrX 139560343 139560419 -27089877 + (TA)n Simple_repeat Simple_repeat 1 76 0 1 1649 282 295 43 19 chrX 139560504 139560600 -27089696 - B1F2 SINE Alu -1 116 26 1 1649 262 250 58 0 chrX 139560637 139560741 -27089555 - L1M3e LINE L1 -3772 3331 3222 1 1649 642 303 105 35 chrX 139560859 139561232 -27089064 - L1M3e LINE L1 -5051 1979 1581 1 1649 529 360 145 12 chrX 139561239 139561481 -27088815 - MTD LTR MaLR -145 274 1 1 1649 462 124 0 58 chrX 139561783 139561886 -27088410 - L1_Mus3 LINE L1 -6 6632 6536 1 1649 192 77 0 0 chrX 139561907 139561933 -27088363 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1649 918 127 40 13 chrX 139561943 139562095 -27088201 - B2_Mm2 SINE B2 -37 158 3 1 1649 1156 256 52 50 chrX 139562189 139562419 -27087877 + L1_Rod LINE L1 2593 2825 -3022 1 1649 3840 61 14 4 chrX 139562419 139562916 -27087380 + L1Md_F2 LINE L1 6081 6582 0 1 1649 1156 256 52 50 chrX 139562916 139563190 -27087106 + L1_Rod LINE L1 2826 3098 -2749 1 1649 3440 32 0 0 chrX 139563315 139563719 -27086577 + L1Md_T LINE L1 6177 6580 -2 1 1649 234 0 0 0 chrX 139563761 139563787 -27086509 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 1 1649 292 152 15 15 chrX 139563959 139564026 -27086270 + CT-rich Low_complexity Low_complexity 3 69 0 1 1649 4710 29 0 0 chrX 139565219 139565764 -27084532 + L1Md_T LINE L1 6038 6582 0 1 1649 310 124 310 34 chrX 139566120 139566236 -27084060 - B2_Mm2 SINE B2 0 195 48 1 1649 1347 80 11 0 chrX 139566282 139566458 -27083838 - B2_Mm1t SINE B2 -14 179 2 1 1649 952 156 6 0 chrX 139566466 139566626 -27083670 - Lx9 LINE L1 -324 7320 7160 1 1649 1179 196 41 16 chrX 139566625 139566941 -27083355 + Lx9 LINE L1 7314 7637 -7 1 1649 537 16 0 0 chrX 139567549 139567611 -27082685 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 1649 582 99 0 0 chrX 139568205 139568296 -27082000 + (CA)n Simple_repeat Simple_repeat 2 92 0 1 1649 485 213 382 16 chrX 139568816 139568935 -27081361 - MLT1A0 LTR MaLR -51 323 159 1 1649 987 135 84 0 chrX 139568935 139569113 -27081183 - B2_Mm2 SINE B2 0 195 3 1 1649 485 302 49 39 chrX 139569113 139569270 -27081026 - MLT1A0 LTR MaLR -207 158 6 1 1649 843 229 43 34 chrX 139569394 139569602 -27080694 - B3 SINE B2 0 216 7 1 1649 1352 74 23 0 chrX 139569736 139569912 -27080384 - B2_Mm2 SINE B2 -15 180 1 1 1649 236 372 67 2 chrX 139570460 139570565 -27079731 + L2a LINE L2 3254 3395 -31 1 1649 35872 46 2 6 chrX 139571353 139576776 -27073520 - L1Md_F2 LINE L1 -3 6579 1170 1 1649 5092 176 22 28 chrX 139576782 139578094 -27072202 - L1Md_F2 LINE L1 -5411 1205 99 1 1649 1168 69 0 0 chrX 139578203 139578347 -27071949 + B1_Mus1 SINE Alu 2 145 -3 1 1649 315 0 0 0 chrX 139578347 139578382 -27071914 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1 1649 3228 32 5 66 chrX 139579685 139580123 -27070173 - IAPLTR2a LTR ERVK 0 411 1 1 1649 378 0 0 0 chrX 139580182 139580224 -27070072 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1649 1369 211 109 9 chrX 139580372 139580712 -27069584 - ORR1D1 LTR MaLR 0 374 1 1 1649 8222 127 35 5 chrX 139580722 139582211 -27068085 - Lx2B LINE L1 0 7000 5470 1 1649 395 241 69 75 chrX 139582210 139582398 -27067898 - Lx7 LINE L1 -518 5773 5587 1 1649 227 313 15 30 chrX 139582404 139582605 -27067691 + L1M2 LINE L1 5102 5299 -844 1 1649 2100 307 79 26 chrX 139582620 139583590 -27066706 + Lx8 LINE L1 6442 7463 -10 1 1649 5618 61 32 3 chrX 139584843 139585568 -27064728 + L1Md_F2 LINE L1 5825 6570 -12 1 1649 931 269 71 0 chrX 139585683 139585966 -27064330 - Lx9 LINE L1 -1001 6643 6341 1 1649 227 31 31 0 chrX 139585966 139585998 -27064298 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 1649 364 167 64 88 chrX 139585999 139586081 -27064215 + Tigger7 DNA MER2_type 2232 2317 -174 1 1649 3378 128 69 0 chrX 139586081 139586620 -27063676 - Lx2 LINE L1 0 6997 6422 1 1649 364 247 536 42 chrX 139586620 139586733 -27063563 + Tigger7 DNA MER2_type 2318 2475 -16 1 1649 356 304 59 7 chrX 139586987 139587123 -27063173 - MLT1A0 LTR MaLR -222 143 1 1 1649 982 298 22 18 chrX 139588576 139588853 -27061443 + LTR33 LTR ERVL 9 286 -229 1 1649 369 43 0 0 chrX 139588853 139588900 -27061396 + (TTCC)n Simple_repeat Simple_repeat 1 47 0 1 1649 864 130 0 0 chrX 139588900 139589038 -27061258 + (TTC)n Simple_repeat Simple_repeat 2 139 0 1 1649 4565 97 5 0 chrX 139589040 139589681 -27060615 - L1_Mus3 LINE L1 -6 6632 5989 1 1649 225 0 0 0 chrX 139589681 139589707 -27060589 - L1_Mus3 LINE L1 -719 5919 5894 1 1649 3720 125 6 10 chrX 139589708 139590331 -27059965 + L1_Mm LINE L1 5065 5685 -198 1 1649 8037 29 0 1 chrX 139590334 139591588 -27058708 - L1Md_T LINE L1 -2 6580 5328 1 206 1949 65 0 0 chrX 139591583 139591844 -27058452 + L1Md_F2 LINE L1 5606 5866 -716 1 1650 4287 70 11 2 chrX 139592311 139592873 -27057423 - RMER2 LTR ERV1 0 567 1 1 1650 336 248 111 34 chrX 139592972 139593089 -27057207 + MIRb SINE MIR 69 194 -74 1 1650 350 308 16 24 chrX 139593320 139593443 -27056853 + MIR SINE MIR 83 204 -58 1 1650 1375 219 36 11 chrX 139593758 139594119 -27056177 - Lx6 LINE L1 -9 7451 7082 1 1650 3700 178 109 79 chrX 139594341 139595206 -27055090 - RMER19B LTR ERVK -11 891 1 1 1650 189 175 0 0 chrX 139595560 139595600 -27054696 + GA-rich Low_complexity Low_complexity 1 40 0 1 1650 347 141 0 40 chrX 139596386 139596460 -27053836 + C-rich Low_complexity Low_complexity 3 73 0 1 1650 227 196 20 61 chrX 139597072 139597129 -27053167 + T-rich Low_complexity Low_complexity 40 96 0 1 1650 1211 48 0 0 chrX 139597129 139597276 -27053020 - B1_Mm SINE Alu 0 147 1 1 1650 227 196 20 61 chrX 139597276 139597316 -27052980 + T-rich Low_complexity Low_complexity 3 39 0 1 1650 545 373 0 40 chrX 139597409 139597635 -27052661 + MER58A DNA MER1_type 8 224 0 1 1650 1483 274 52 63 chrX 139597744 139598397 -27051899 + RLTR18B LTR ERVK 1 616 0 1 1650 932 138 0 33 chrX 139598728 139598740 -27051556 - B1_Mur4 SINE Alu -5 145 138 1 1650 212 0 36 0 chrX 139598740 139598768 -27051528 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 1 1650 932 138 0 33 chrX 139598768 139598905 -27051391 - B1_Mur4 SINE Alu -13 137 1 1 1650 555 16 0 0 chrX 139601698 139601762 -27048534 + (TA)n Simple_repeat Simple_repeat 1 64 0 1 1650 1859 249 68 2 chrX 139602033 139602533 -27047763 - MT2A LTR ERVL 0 533 1 1 1650 1362 246 36 67 chrX 139602544 139603066 -27047230 - MERVL_2A-int LTR ERVL -26 5735 5230 1 1650 3011 177 25 42 chrX 139603082 139603112 -27047184 - Lx9 LINE L1 -10 7634 7606 1 1650 3960 163 27 16 chrX 139603112 139603451 -27046845 - RMER6D LTR ERVK 0 720 370 1 1650 717 34 0 0 chrX 139603451 139603539 -27046757 + (CA)n Simple_repeat Simple_repeat 1 88 0 1 1650 3960 163 27 16 chrX 139603539 139603909 -27046387 - RMER6D LTR ERVK -351 369 3 1 1650 3011 177 25 42 chrX 139603909 139604545 -27045751 - Lx9 LINE L1 -39 7605 6979 1 1650 2939 40 181 2 chrX 139604577 139604980 -27045316 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1650 5141 59 13 20 chrX 139604982 139605692 -27044604 - IAPEz-int LTR ERVK -2 6479 5775 1 1650 2979 19 0 0 chrX 139605692 139606052 -27044244 - IAPEz-int LTR ERVK -2121 4360 4001 1 1650 6512 39 93 4 chrX 139606050 139607147 -27043149 - IAPEz-int LTR ERVK -3707 2774 1580 1 1650 2746 15 95 6 chrX 139607147 139607484 -27042812 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1650 43835 25 7 2 chrX 139607484 139613874 -27036422 - IAPEz-int LTR ERVK 0 6481 8 1 1650 2746 15 95 6 chrX 139613874 139614211 -27036085 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1650 1700 66 0 0 chrX 139614211 139614438 -27035858 - IAPEz-int LTR ERVK -4896 1585 1359 1 1650 3289 53 22 16 chrX 139614438 139615004 -27035292 - IAPEz-int LTR ERVK -5819 662 168 1 1650 226 321 0 0 chrX 139615004 139615057 -27035239 - RLTR27 LTR ERVK -34 275 223 1 1650 933 126 25 81 chrX 139615057 139615255 -27035041 - IAPEz-int LTR ERVK -6286 195 9 1 1650 2961 45 175 2 chrX 139615256 139615661 -27034635 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1650 3236 250 83 60 chrX 139615661 139615819 -27034477 - MERVL_2A-int LTR ERVL -545 5216 5096 1 1650 4573 46 0 0 chrX 139615819 139616364 -27033932 - L1_Mus1 LINE L1 -4 6563 6019 1 1650 3236 250 83 60 chrX 139616364 139617096 -27033200 - MERVL_2A-int LTR ERVL -666 5095 4312 1 1650 240 35 0 0 chrX 139617096 139617125 -27033171 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1 1650 3236 250 83 60 chrX 139617125 139617259 -27033037 - MERVL_2A-int LTR ERVL -1450 4311 4168 1 1650 189 94 0 0 chrX 139617646 139617678 -27032618 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1650 207 0 0 0 chrX 139617833 139617856 -27032440 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1650 204 122 0 0 chrX 139617881 139617922 -27032374 + (T)n Simple_repeat Simple_repeat 1 41 0 1 1650 620 198 11 112 chrX 139619147 139619335 -27030961 - MERVL_2A-int LTR ERVL -1585 4176 4008 1 1650 317 217 122 78 chrX 139619359 139619449 -27030847 - MTD-int LTR MaLR -1159 99 1 1 1650 1630 205 129 0 chrX 139619449 139619820 -27030476 - MTD LTR MaLR 0 419 1 1 1650 1092 84 14 0 chrX 139619994 139620136 -27030160 + B1_Mm SINE Alu 3 146 -1 1 1650 519 60 0 0 chrX 139620800 139620867 -27029429 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 1650 492 18 0 0 chrX 139622209 139622266 -27028030 + (TTTTC)n Simple_repeat Simple_repeat 3 59 0 1 1650 1012 134 0 16 chrX 139622271 139622453 -27027843 + CT-rich Low_complexity Low_complexity 2 180 0 1 1650 519 280 14 20 chrX 139622461 139622607 -27027689 - ID_B1 SINE B4 0 224 80 1 1650 273 336 124 26 chrX 139623225 139623378 -27026918 + MER96 DNA hAT 7 174 -1 1 1650 225 333 36 0 chrX 139623556 139623640 -27026656 + MLT1H LTR MaLR 460 546 -3 1 1650 25 31 0 0 chrX 139623846 139623878 -27026418 + AT_rich Low_complexity Low_complexity 1 32 0 1 1650 2290 120 13 13 chrX 139625000 139625373 -27024923 + Lx2A1 LINE L1 6631 7003 -5 1 1650 220 199 0 6 chrX 139625705 139625746 -27024550 + MIR SINE MIR 82 124 -144 1 1650 369 262 71 32 chrX 139626153 139626279 -27024017 + MARNA DNA Mariner 79 209 -377 1 1650 459 0 0 0 chrX 139626669 139626720 -27023576 + (CAAAAA)n Simple_repeat Simple_repeat 2 52 0 1 1650 426 250 127 55 chrX 139626726 139626836 -27023460 + RSINE1 SINE B4 1 118 -47 1 1650 22 56 0 0 chrX 139627159 139627195 -27023101 + AT_rich Low_complexity Low_complexity 1 36 0 1 1650 468 0 0 0 chrX 139627229 139627281 -27023015 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1650 1027 82 120 0 chrX 139627344 139627502 -27022794 + B2_Mm2 SINE B2 1 177 -18 2 1650 631 84 0 0 chrX 139627927 139628105 -27022191 - L1_Mus2 LINE L1 0 6566 6466 2 1650 369 260 88 20 chrX 139629302 139629454 -27020842 + MIRc SINE MIR 16 173 -35 2 1650 264 361 41 0 chrX 139630544 139630641 -27019655 - MLT1J1 LTR MaLR -175 269 169 2 1650 886 246 20 10 chrX 139630668 139630869 -27019427 - B3 SINE B2 -12 204 2 2 1650 595 303 7 13 chrX 139630884 139631038 -27019258 - MLT1J1 LTR MaLR -271 173 21 2 1650 253 324 87 32 chrX 139633240 139633425 -27016871 + MIRb SINE MIR 42 236 -26 2 1650 362 187 40 13 chrX 139633498 139633574 -27016722 + B4A SINE B4 4 81 -211 2 1650 243 0 0 0 chrX 139633661 139633688 -27016608 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1650 333 62 0 0 chrX 139633688 139633736 -27016560 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 1650 299 296 81 30 chrX 139633785 139634119 -27016177 + L1MD LINE L1 4557 4907 -1239 2 1650 355 282 65 114 chrX 139634396 139634748 -27015548 + L1MD LINE L1 5272 5606 -636 2 1650 439 343 19 50 chrX 139634897 139635155 -27015141 + MLT1B LTR MaLR 129 378 -12 2 1650 1338 9 5 27 chrX 139635252 139635474 -27014822 + (CA)n Simple_repeat Simple_repeat 1 216 0 2 1650 309 333 40 7 chrX 139635664 139635815 -27014481 - L1MC4 LINE L1 -580 7462 7307 2 1650 210 305 75 43 chrX 139636218 139636379 -27013917 + L2c LINE L2 3107 3272 -115 2 1650 1644 159 168 21 chrX 139636670 139637010 -27013286 - RMER19A LTR ERVK -347 390 1 2 1650 242 360 61 9 chrX 139637029 139637144 -27013152 + MLT1I LTR MaLR 289 409 -2 2 1650 246 105 0 0 chrX 139637670 139637708 -27012588 + (TCC)n Simple_repeat Simple_repeat 3 40 0 2 1650 395 311 109 55 chrX 139638432 139638804 -27011492 + L2c LINE L2 3048 3426 0 2 1650 333 333 12 47 chrX 139638871 139639041 -27011255 - MIRc SINE MIR -2 266 103 2 1650 377 220 90 15 chrX 139639260 139639394 -27010902 + Lx9 LINE L1 7488 7631 -13 2 1650 707 187 110 49 chrX 139639397 139639560 -27010736 + B2_Mm2 SINE B2 1 173 -22 2 1650 2667 67 75 0 chrX 139639755 139640113 -27010183 + MTB LTR MaLR 16 400 0 2 1650 2363 149 47 25 chrX 139640163 139640611 -27009685 - Lx5 LINE L1 -228 6822 6365 2 1650 291 347 172 8 chrX 139640605 139640843 -27009453 + Lx8 LINE L1 7047 7323 -150 2 1650 199 0 65 0 chrX 139640846 139640877 -27009419 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 2 1650 310 261 0 0 chrX 139641010 139641075 -27009221 - PB1D10 SINE Alu -5 112 48 2 1650 736 241 244 20 chrX 139641279 139641673 -27008623 - L1MC1 LINE L1 -10 6323 5842 2 1650 1212 248 36 33 chrX 139641672 139642122 -27008174 + L1MA7 LINE L1 4779 5229 -914 2 1650 1256 263 102 34 chrX 139642115 139642725 -27007571 + L1MA7 LINE L1 5333 5983 -308 2 1650 262 221 213 7 chrX 139642868 139643023 -27007273 + L1MA7 LINE L1 6090 6276 -15 2 1650 460 319 25 25 chrX 139643179 139643298 -27006998 - MTE2b LTR MaLR -52 327 209 2 1650 303 324 19 0 chrX 139643301 139643406 -27006890 - L1M4 LINE L1 -2645 3501 3395 2 1650 245 128 48 0 chrX 139643457 139643503 -27006793 - B1_Mur2 SINE Alu -9 140 93 2 1650 225 259 37 0 chrX 139643578 139643632 -27006664 - 4.5SRNA scRNA scRNA -6 88 33 2 1650 290 260 13 52 chrX 139643749 139643826 -27006470 - ID_B1 SINE B4 -73 151 78 2 1650 243 0 0 0 chrX 139643842 139643869 -27006427 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1650 521 267 75 0 chrX 139643869 139644056 -27006240 + MER63D DNA AcHobo 12 212 -849 2 1650 357 197 0 0 chrX 139644056 139644132 -27006164 + (TA)n Simple_repeat Simple_repeat 2 77 0 2 1650 397 281 138 15 chrX 139644169 139644364 -27005932 + MER63D DNA AcHobo 365 583 -478 2 1650 537 258 61 22 chrX 139644578 139644808 -27005488 - L1MC1 LINE L1 -164 6169 5931 2 1650 267 79 0 0 chrX 139644929 139644967 -27005329 + L1_Mm LINE L1 3687 3724 -2159 2 1650 14753 95 17 7 chrX 139644990 139647963 -27002333 - L1_Mus1 LINE L1 -4 6563 3559 2 1650 1133 96 0 0 chrX 139648018 139648164 -27002132 - B1_Mus2 SINE Alu -1 146 1 2 1650 5149 156 33 21 chrX 139648165 139649037 -27001259 - RMER19B LTR ERVK -19 883 1 2 1650 908 170 0 0 chrX 139649150 139649291 -27001005 + B1_Mus1 SINE Alu 1 141 -7 2 1650 180 0 0 0 chrX 139649292 139649312 -27000984 + (CCAA)n Simple_repeat Simple_repeat 4 23 0 2 1650 615 337 28 57 chrX 139649343 139649554 -27000742 + B4A SINE B4 4 208 -84 2 1650 570 256 28 35 chrX 139649534 139649676 -27000620 - B3 SINE B2 -74 142 2 2 1650 615 62 0 0 chrX 139649906 139649986 -27000310 + (TA)n Simple_repeat Simple_repeat 2 81 0 2 1650 232 140 0 85 chrX 139650873 139650920 -26999376 + MIR3 SINE MIR 150 192 -16 2 1650 199 191 0 0 chrX 139651328 139651370 -26998926 - L2c LINE L2 0 3387 3346 2 1650 1130 293 77 12 chrX 139651716 139652314 -26997982 - L1MB8 LINE L1 -34 6144 5508 2 1650 458 322 129 10 chrX 139652389 139652590 -26997706 - MIR SINE MIR -21 241 17 2 1650 2175 130 221 8 chrX 139652610 139652994 -26997302 - RMER4A LTR ERVK 0 466 1 2 1650 279 71 0 0 chrX 139653212 139653254 -26997042 + (CAAAAA)n Simple_repeat Simple_repeat 3 44 0 2 1650 891 26 0 0 chrX 139653276 139653392 -26996904 + L1Md_T LINE L1 6466 6581 -1 2 1650 267 100 39 39 chrX 139654162 139654214 -26996082 - B1_Mur2 SINE Alu -1 148 97 2 1650 4365 97 115 7 chrX 139654215 139654891 -26995405 + RMER17A LTR ERVK 1 749 -2 2 1650 362 198 37 0 chrX 139654904 139654985 -26995311 + MTD LTR MaLR 336 419 0 2 1650 654 237 56 20 chrX 139655269 139655467 -26994829 - B3 SINE B2 -11 205 1 2 1650 38 22 0 0 chrX 139656080 139656125 -26994171 + AT_rich Low_complexity Low_complexity 1 45 0 2 1650 380 233 303 12 chrX 139656405 139656570 -26993726 - L2a LINE L2 -4 3422 3210 2 1650 1990 183 31 24 chrX 139657574 139657671 -26992625 + ORR1C2 LTR MaLR 1 98 -286 2 1650 1990 215 152 77 chrX 139657671 139658357 -26991939 + RMER19A LTR ERVK 1 737 0 2 1650 1990 183 31 24 chrX 139658357 139658640 -26991656 + ORR1C2 LTR MaLR 99 383 -1 2 1650 194 337 23 23 chrX 139658683 139658771 -26991525 + MIR SINE MIR 165 252 -10 2 1650 466 288 57 7 chrX 139658817 139658957 -26991339 + MER5A1 DNA MER1_type 20 166 0 2 1650 222 62 0 0 chrX 139659622 139659654 -26990642 + (T)n Simple_repeat Simple_repeat 1 32 0 2 1650 8166 31 4 4 chrX 139659985 139660957 -26989339 + L1Md_F2 LINE L1 5597 6568 -14 2 1650 470 266 0 63 chrX 139661259 139661402 -26988894 + RSINE1 SINE B4 35 165 0 2 1650 735 273 60 32 chrX 139661427 139661677 -26988619 + MER2 DNA MER2_type 84 340 -5 2 1650 375 271 101 34 chrX 139661756 139661905 -26988391 - Charlie4a DNA MER1_type 0 508 350 2 1650 530 260 0 0 chrX 139661910 139662014 -26988282 + B1F2 SINE Alu 2 105 -44 2 1650 681 247 162 96 chrX 139662016 139662361 -26987935 - RLTR9A LTR ERVK 0 368 1 2 1650 386 252 90 22 chrX 139662471 139662605 -26987691 - Charlie4a DNA MER1_type -250 258 116 2 1650 1193 126 5 26 chrX 139662823 139663018 -26987278 + Lx4A LINE L1 6868 7058 0 2 1650 23 0 0 0 chrX 139663018 139663041 -26987255 + AT_rich Low_complexity Low_complexity 1 23 0 2 1650 275 301 93 50 chrX 139663069 139663209 -26987087 + L2c LINE L2 3221 3366 -21 2 1650 768 272 63 0 chrX 139663692 139663898 -26986398 + ID_B1 SINE B4 3 221 -3 2 1650 30354 47 0 2 chrX 139663908 139669864 -26980432 + L1Md_T LINE L1 1 5589 -297 2 1650 8428 34 0 2 chrX 139669864 139670891 -26979405 + L1Md_T LINE L1 5590 6585 0 2 1650 438 53 0 0 chrX 139670946 139671003 -26979293 + (A)n Simple_repeat Simple_repeat 1 57 0 2 1650 311 354 78 141 chrX 139671089 139671523 -26978773 + MLT1I LTR MaLR 1 407 -4 2 1650 333 0 0 0 chrX 139671776 139671813 -26978483 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1650 594 204 56 30 chrX 139671813 139671951 -26978345 - B1_Mur4 SINE Alu -9 141 1 2 1650 255 211 28 128 chrX 139671853 139671962 -26978334 - RLTR25B LTR ERVK -527 501 404 2 1650 884 36 9 0 chrX 139671971 139672083 -26978213 + (GA)n Simple_repeat Simple_repeat 2 114 0 2 1650 190 360 82 31 chrX 139672513 139672708 -26977588 + MIRc SINE MIR 42 246 -22 2 1650 394 257 67 28 chrX 139673071 139673251 -26977045 - L1MB3 LINE L1 -1 6182 5996 2 1650 484 276 99 20 chrX 139673418 139673921 -26976375 - L1M4 LINE L1 -825 5321 4766 2 1650 930 163 0 0 chrX 139674195 139674342 -26975954 - B1_Mus1 SINE Alu 0 148 2 2 1650 262 254 80 22 chrX 139674358 139674495 -26975801 - RMER1C Other Other -1 1341 1197 2 1650 2055 263 27 23 chrX 139674509 139675109 -26975187 - RMER1C Other Other -119 1223 622 2 1650 219 437 0 0 chrX 139675345 139675448 -26974848 + L2b LINE L2 3273 3375 0 2 1650 1365 243 19 55 chrX 139676018 139676147 -26974149 + MTE2b LTR MaLR 8 126 -253 2 1650 2199 91 48 3 chrX 139676147 139676456 -26973840 - ORR1A2 LTR MaLR -4 323 1 2 1650 1365 243 19 55 chrX 139676456 139676691 -26973605 + MTE2b LTR MaLR 127 358 -21 2 1650 476 72 14 0 chrX 139677309 139677378 -26972918 + (GAGAA)n Simple_repeat Simple_repeat 4 73 0 2 1650 735 229 0 0 chrX 139677374 139677549 -26972747 + GA-rich Low_complexity Low_complexity 4 178 0 2 1650 434 237 8 0 chrX 139677585 139677703 -26972593 + GA-rich Low_complexity Low_complexity 5 123 0 2 1650 226 340 19 19 chrX 139678020 139678128 -26972168 - L2a LINE L2 -264 3162 3055 2 1650 429 20 0 0 chrX 139678460 139678510 -26971786 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 1650 245 317 115 40 chrX 139678510 139678649 -26971647 - L2a LINE L2 -625 2794 2642 2 1650 436 278 120 8 chrX 139678710 139678957 -26971339 - L1MA7 LINE L1 -220 6071 5796 2 1650 3622 86 6 41 chrX 139678960 139679496 -26970800 - RMER2 LTR ERV1 -50 517 1 2 1650 3974 128 41 46 chrX 139679522 139680277 -26970019 + RMER6A LTR ERVK 1 751 -5 2 1650 200 94 0 30 chrX 139680520 139680553 -26969743 + (TTTTC)n Simple_repeat Simple_repeat 5 36 0 2 1650 342 0 0 0 chrX 139681428 139681466 -26968830 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 1650 227 352 0 22 chrX 139681586 139681676 -26968620 + MTEa LTR MaLR 233 320 -59 2 1650 199 173 0 37 chrX 139681746 139681800 -26968496 + GA-rich Low_complexity Low_complexity 4 55 0 2 1650 262 249 16 29 chrX 139681826 139681904 -26968392 + MTEa LTR MaLR 281 376 -3 2 1650 25 31 0 0 chrX 139682074 139682106 -26968190 + AT_rich Low_complexity Low_complexity 1 32 0 3 1650 587 212 104 15 chrX 139682146 139682347 -26967949 - L1MA8 LINE L1 -16 6275 6057 3 1650 335 223 75 28 chrX 139682362 139682468 -26967828 + MER113A DNA MER1_type 204 314 0 3 1650 480 159 505 0 chrX 139682628 139682830 -26967466 + Lx9 LINE L1 7270 7573 -71 3 1650 2150 81 7 3 chrX 139683235 139683531 -26966765 - L1_Mus3 LINE L1 -6 6632 6336 3 1650 282 368 121 56 chrX 139683690 139683995 -26966301 - MLT1I LTR MaLR -29 382 58 3 1650 1394 202 10 36 chrX 139683956 139684264 -26966032 - RLTR16 LTR ERVK -18 487 188 3 1650 21 0 0 0 chrX 139684814 139684835 -26965461 + AT_rich Low_complexity Low_complexity 1 21 0 3 1650 928 292 39 5 chrX 139684942 139685327 -26964969 + MERVK26-int LTR ERVK 4459 4856 -2063 3 1650 1223 181 70 7 chrX 139685536 139685626 -26964670 + RMER17C LTR ERVK 1 90 -320 3 1650 321 26 0 0 chrX 139685626 139685664 -26964632 + (TC)n Simple_repeat Simple_repeat 2 39 0 3 1650 1223 181 70 7 chrX 139685664 139685857 -26964439 + RMER17C LTR ERVK 91 301 -109 3 1650 5537 217 42 16 chrX 139685946 139687646 -26962650 + MERVK26-int LTR ERVK 5091 6917 -2 3 1650 783 323 69 14 chrX 139687744 139688090 -26962206 + RMER20A LTR ERVK 152 516 0 3 1650 477 111 80 10 chrX 139688171 139688271 -26962025 - RMER17C LTR ERVK -118 292 186 3 1650 288 0 0 0 chrX 139688766 139688798 -26961498 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 3 1650 1942 34 0 0 chrX 139688955 139689192 -26961104 + L1Md_T LINE L1 5350 5586 -297 3 1650 8458 31 0 4 chrX 139689192 139690192 -26960104 + L1Md_T LINE L1 5587 6582 0 3 1650 1025 206 19 31 chrX 139690192 139690220 -26960076 + L1MD LINE L1 5616 5641 -601 3 1650 36537 43 0 3 chrX 139691006 139697504 -26952792 - L1Md_T LINE L1 0 6585 49 3 1650 283 159 200 27 chrX 139697921 139698031 -26952265 + L1M5 LINE L1 5387 5515 -679 3 1650 180 0 0 0 chrX 139698144 139698164 -26952132 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1650 383 291 70 58 chrX 139698164 139698405 -26951891 - L2a LINE L2 -52 3374 3131 3 1650 186 43 0 0 chrX 139698468 139698491 -26951805 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 1650 264 278 164 18 chrX 139698601 139698766 -26951530 + L1ME5 LINE L1 5765 5953 -241 3 1650 48 32 0 0 chrX 139698778 139698840 -26951456 + AT_rich Low_complexity Low_complexity 1 62 0 3 1650 324 0 0 0 chrX 139698946 139698982 -26951314 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 1650 297 0 0 0 chrX 139698982 139699014 -26951282 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1650 244 343 63 72 chrX 139699695 139699918 -26950378 + MLT1K LTR MaLR 217 437 -158 3 1650 321 318 196 23 chrX 139701141 139701360 -26948936 - MIR SINE MIR -5 257 1 3 1650 935 173 142 43 chrX 139701599 139701901 -26948395 - Lx9 LINE L1 0 7644 7313 3 1650 278 305 22 71 chrX 139701977 139702044 -26948252 + L1M5 LINE L1 2172 2231 -3915 3 1650 1978 173 32 40 chrX 139702044 139702423 -26947873 - ORR1C1 LTR MaLR -2 376 1 3 1650 278 305 22 71 chrX 139702423 139702581 -26947715 + L1M5 LINE L1 2232 2386 -3760 3 1650 1126 65 0 0 chrX 139702586 139702724 -26947572 + B1_Mus1 SINE Alu 1 138 -10 3 1650 333 0 0 0 chrX 139702724 139702761 -26947535 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 1650 1915 18 0 0 chrX 139702784 139703012 -26947284 + L1Md_T LINE L1 5358 5585 -298 3 1650 8521 31 0 0 chrX 139703013 139704007 -26946289 + L1Md_T LINE L1 5587 6580 -2 3 1650 289 327 74 32 chrX 139704023 139704361 -26945935 + L1M5 LINE L1 2391 2742 -3404 3 1650 3185 93 48 23 chrX 139704376 139704860 -26945436 - Lx LINE L1 -1 6653 6158 3 1650 388 267 79 0 chrX 139704864 139704965 -26945331 + PB1D10 SINE Alu 1 109 -8 3 1650 351 136 0 0 chrX 139704978 139705037 -26945259 + (TA)n Simple_repeat Simple_repeat 1 59 0 3 1650 21 36 0 0 chrX 139705142 139705170 -26945126 + AT_rich Low_complexity Low_complexity 1 28 0 3 1650 225 270 0 22 chrX 139705187 139705278 -26945018 + L1MD LINE L1 2870 2958 -3188 3 1650 228 242 15 29 chrX 139705304 139705372 -26944924 + RMER1B Other Other 1 67 -999 3 1650 894 227 22 29 chrX 139705367 139705608 -26944688 + RMER1B Other Other 48 520 -546 3 1650 1262 176 61 24 chrX 139705604 139705900 -26944396 + RMER1B Other Other 757 1063 -3 3 1650 573 260 74 20 chrX 139706179 139706477 -26943819 + L1MD LINE L1 2995 3308 -2838 3 1650 1003 193 61 5 chrX 139706770 139706968 -26943328 - B3 SINE B2 -6 210 2 3 1650 351 314 62 22 chrX 139706986 139707165 -26943131 + LTR82A LTR ERVL 257 442 -430 3 1650 615 303 95 17 chrX 139707236 139707468 -26942828 + LTR82A LTR ERVL 572 821 -51 3 1650 305 326 163 0 chrX 139707515 139707705 -26942591 - MIR SINE MIR -39 223 3 3 1650 321 233 0 22 chrX 139707911 139708003 -26942293 - L1MB7 LINE L1 -9 6175 6086 3 1650 470 281 99 12 chrX 139709955 139710117 -26940179 + MER97c DNA MER1_type? 2 177 -913 3 1650 292 276 26 0 chrX 139710491 139710567 -26939729 + MTEa LTR MaLR 288 365 -14 3 1650 1366 171 149 18 chrX 139710568 139710896 -26939400 - ORR1D1 LTR MaLR 0 374 4 3 1650 318 328 137 56 chrX 139711411 139711695 -26938601 - ORR1C2 LTR MaLR -72 312 6 3 1650 408 257 6 77 chrX 139712604 139712760 -26937536 + Lx8 LINE L1 7007 7151 -322 3 1650 937 110 12 0 chrX 139712786 139712949 -26937347 + (GA)n Simple_repeat Simple_repeat 2 166 0 3 1650 4199 116 118 40 chrX 139713458 139714607 -26935689 - Lx3C LINE L1 -1 6975 5737 3 1650 222 91 0 0 chrX 139714735 139714768 -26935528 + (TTTC)n Simple_repeat Simple_repeat 4 36 0 3 1650 256 268 45 29 chrX 139715204 139715328 -26934968 + MIR SINE MIR 116 245 -23 3 1650 417 39 0 0 chrX 139715908 139715959 -26934337 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 3 1650 2056 201 18 33 chrX 139715959 139716408 -26933888 - Lx5 LINE L1 -19 7031 6590 3 1650 2875 84 44 0 chrX 139716497 139716880 -26933416 - MTB LTR MaLR 0 400 1 3 1650 667 197 0 0 chrX 139717064 139717186 -26933110 + Lx4A LINE L1 6498 6619 -439 3 1650 1938 129 7 7 chrX 139717204 139717509 -26932787 - Lx2 LINE L1 -8 6989 6685 3 1650 1043 299 83 33 chrX 139717845 139718385 -26931911 - MER34A LTR ERV1 -4 567 1 3 1650 580 268 137 0 chrX 139718397 139718587 -26931709 + B3 SINE B2 1 216 0 3 1650 458 238 48 63 chrX 139719173 139719379 -26930917 - RMER17C LTR ERVK -149 261 59 3 1650 220 352 36 77 chrX 139719432 139719626 -26930670 + L2 LINE L2 1820 2005 -1414 3 1650 25 31 0 0 chrX 139720221 139720253 -26930043 + AT_rich Low_complexity Low_complexity 1 32 0 3 1650 325 296 0 36 chrX 139721956 139722040 -26928256 - ID4 SINE ID 0 83 3 3 1651 535 288 90 13 chrX 139722887 139723042 -26927254 - B3A SINE B2 -31 167 1 3 1651 181 402 54 27 chrX 139726803 139726987 -26923309 + MER5A DNA MER1_type 1 189 0 3 1651 667 245 28 0 chrX 139726997 139727140 -26923156 - B1_Mur1 SINE Alu -2 147 1 3 1651 501 259 67 67 chrX 139727425 139727440 -26922856 - RSINE1 SINE B4 -1 164 151 3 1651 321 89 0 0 chrX 139727440 139727485 -26922811 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1651 501 259 67 67 chrX 139727485 139727618 -26922678 - RSINE1 SINE B4 -15 150 16 3 1651 312 298 65 73 chrX 139727767 139727890 -26922406 + MER5B DNA MER1_type 1 122 -56 3 1651 351 44 0 0 chrX 139728188 139728233 -26922063 + (CTAA)n Simple_repeat Simple_repeat 3 47 0 3 1651 228 356 108 10 chrX 139731195 139731399 -26918897 + L2a LINE L2 3193 3416 -10 3 1651 490 305 118 21 chrX 139731739 139732164 -26918132 - L1ME4a LINE L1 -5 6119 5654 3 1651 376 238 128 40 chrX 139732705 139732854 -26917442 - MER5A1 DNA MER1_type -3 163 2 3 1651 412 308 50 66 chrX 139732879 139733060 -26917236 + MER5B DNA MER1_type 1 178 0 3 1651 219 373 9 18 chrX 139733286 139733398 -26916898 - MIRm SINE MIR -106 170 60 3 1651 219 343 123 22 chrX 139733476 139733622 -26916674 + MIRm SINE MIR 2 158 -110 3 1651 422 239 170 26 chrX 139733643 139733914 -26916382 + L1MA5 LINE L1 5990 6299 -1 3 1651 21 36 0 0 chrX 139736895 139736923 -26913373 + AT_rich Low_complexity Low_complexity 1 28 0 3 1651 291 348 86 35 chrX 139738872 139738988 -26911308 + L2a LINE L2 3304 3425 -1 3 1651 494 317 94 82 chrX 139739946 139740286 -26910010 + ORR1E LTR MaLR 10 353 -6 3 1651 539 231 41 53 chrX 139740524 139740693 -26909603 - MER5B DNA MER1_type -8 170 4 3 1651 346 173 132 19 chrX 139740755 139740861 -26909435 - Lx9 LINE L1 0 7644 7527 3 1651 306 297 122 8 chrX 139741348 139741586 -26908710 + L1MA6 LINE L1 5997 6261 -39 3 1651 556 310 47 75 chrX 139741643 139741812 -26908484 + B3 SINE B2 1 158 -58 3 1651 282 56 0 0 chrX 139741812 139741848 -26908448 + (TATG)n Simple_repeat Simple_repeat 3 38 0 3 1651 556 310 47 75 chrX 139741848 139741891 -26908405 + B3 SINE B2 159 207 -9 3 1651 497 188 59 0 chrX 139741990 139742091 -26908205 + L1MD1 LINE L1 6123 6229 -13 3 1651 2218 173 22 14 chrX 139742751 139743168 -26907128 + MTC LTR MaLR 2 421 0 3 1651 215 213 0 78 chrX 139743261 139743312 -26906984 - L2a LINE L2 -3 3423 3377 3 1651 232 245 106 62 chrX 139743659 139743772 -26906524 + L1M6 LINE L1 9 126 -6370 3 1651 21 36 0 0 chrX 139744249 139744277 -26906019 + AT_rich Low_complexity Low_complexity 1 28 0 3 1651 207 0 0 0 chrX 139744519 139744542 -26905754 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1651 536 242 136 30 chrX 139744545 139744677 -26905619 - RSINE1 SINE B4 -16 149 4 3 1651 420 20 0 0 chrX 139745107 139745156 -26905140 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1651 405 0 0 0 chrX 139746328 139746373 -26903923 + (TC)n Simple_repeat Simple_repeat 1 45 0 3 1651 270 0 0 0 chrX 139746373 139746402 -26903894 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1651 294 225 1 23 chrX 139746474 139746567 -26903729 + L1_Rod LINE L1 4629 4744 -1136 3 1651 446 299 64 21 chrX 139746662 139746802 -26903494 - B1F1 SINE Alu -3 146 1 3 1651 293 365 64 0 chrX 139747555 139747711 -26902585 + L2a LINE L2 3261 3426 0 3 1651 540 303 21 0 chrX 139747852 139747997 -26902299 + MER5A DNA MER1_type 42 189 0 3 1651 387 0 0 0 chrX 139749686 139749729 -26900567 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1651 540 106 0 0 chrX 139749729 139749823 -26900473 + (GA)n Simple_repeat Simple_repeat 1 94 0 4 1651 540 0 0 0 chrX 139749844 139749904 -26900392 + (TTCC)n Simple_repeat Simple_repeat 1 60 0 4 1651 191 35 85 34 chrX 139751276 139751335 -26898961 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 1651 645 302 49 18 chrX 139751444 139751670 -26898626 + MIR SINE MIR 13 245 -17 4 1651 263 247 0 36 chrX 139751924 139752008 -26898288 + (CATA)n Simple_repeat Simple_repeat 4 84 0 4 1651 324 237 13 13 chrX 139752988 139753065 -26897231 - ID4 SINE ID -5 78 2 4 1651 731 83 9 0 chrX 139753161 139753269 -26897027 + (TTTTG)n Simple_repeat Simple_repeat 2 110 0 4 1651 564 165 0 92 chrX 139753269 139753389 -26896907 - PB1D9 SINE Alu -11 109 1 4 1651 8030 26 8 0 chrX 139753663 139754699 -26895597 - L1Md_T LINE L1 0 6582 5542 4 1651 353 247 31 10 chrX 139754929 139755027 -26895269 + MLT1A1 LTR MaLR 304 403 -5 4 1651 398 245 82 36 chrX 139755530 139755640 -26894656 + PB1D7 SINE Alu 6 120 0 4 1651 229 329 24 12 chrX 139756341 139756424 -26893872 - L2a LINE L2 -1 3425 3342 4 1651 395 314 112 45 chrX 139756529 139756752 -26893544 + MIR SINE MIR 12 249 -13 4 1651 264 389 60 0 chrX 139757539 139757706 -26892590 + L3b LINE CR1 75 251 -231 4 1651 401 372 73 16 chrX 139757839 139758085 -26892211 - MIRb SINE MIR -8 260 1 4 1651 363 343 122 38 chrX 139759422 139759963 -26890333 + L2c LINE L2 2726 3318 -69 4 1651 183 194 56 0 chrX 139760157 139760193 -26890103 + MIRm SINE MIR 234 271 -5 4 1651 451 276 112 30 chrX 139761543 139761775 -26888521 - Lx8 LINE L1 -11 7462 7212 4 1651 216 0 0 0 chrX 139762633 139762657 -26887639 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 4 1651 249 302 5 46 chrX 139762804 139762911 -26887385 - L2a LINE L2 -19 3407 3270 4 1651 241 217 33 0 chrX 139763674 139763734 -26886562 + (TCTCTG)n Simple_repeat Simple_repeat 5 66 0 4 1651 336 315 87 22 chrX 139764052 139764237 -26886059 - MIRb SINE MIR 0 268 72 4 1651 238 321 71 12 chrX 139764281 139764366 -26885930 - MIRb SINE MIR -161 107 18 4 1651 393 39 0 0 chrX 139764920 139764971 -26885325 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1651 802 328 19 77 chrX 139766234 139766597 -26883699 + RMER15 LTR ERVL 222 563 -12 4 1651 3870 49 0 4 chrX 139766847 139767317 -26882979 - L1_Mus1 LINE L1 0 6567 6100 4 1651 495 171 0 0 chrX 139767823 139767928 -26882368 + (TA)n Simple_repeat Simple_repeat 1 105 0 4 1651 687 290 113 19 chrX 139768477 139768734 -26881562 - B4A SINE B4 -6 286 6 4 1651 1025 251 92 26 chrX 139769268 139769615 -26880681 + Lx8 LINE L1 6628 6997 -476 4 1651 356 295 0 11 chrX 139769713 139769802 -26880494 + B1F SINE Alu 26 113 -36 4 1651 622 291 50 20 chrX 139769846 139770144 -26880152 + L1MB7 LINE L1 5862 6168 -16 4 1651 180 97 0 0 chrX 139772514 139772545 -26877751 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1651 235 183 225 0 chrX 139773105 139773176 -26877120 + Charlie14a DNA MER1_type 1 87 -1077 4 1651 674 186 89 0 chrX 139774128 139774252 -26876044 + B1_Mur3 SINE Alu 9 143 -6 4 1651 284 148 0 0 chrX 139775247 139775301 -26874995 + Lx8 LINE L1 7420 7473 0 4 1651 1052 250 5 0 chrX 139775362 139775550 -26874746 + ID_B1 SINE B4 2 190 -34 4 1651 213 219 0 0 chrX 139775567 139775608 -26874688 + (TATATG)n Simple_repeat Simple_repeat 1 41 0 4 1651 519 245 90 26 chrX 139775838 139775993 -26874303 + MER5A1 DNA MER1_type 1 165 -1 4 1651 1089 258 38 7 chrX 139776288 139776581 -26873715 + Lx8 LINE L1 7171 7472 -1 4 1651 489 335 34 6 chrX 139776689 139776866 -26873430 + MER20 DNA MER1_type 10 191 -28 4 1651 251 280 127 40 chrX 139777361 139777466 -26872830 - B3A SINE B2 0 216 106 4 1651 431 373 91 30 chrX 139777473 139777769 -26872527 + MLT1J2 LTR MaLR 21 334 -114 4 1651 624 208 101 0 chrX 139778727 139778876 -26871420 + MER58A DNA MER1_type 24 187 -37 4 1651 782 228 134 5 chrX 139780363 139780557 -26869739 - URR1B DNA MER1_type 0 225 7 4 1651 771 50 41 0 chrX 139780825 139780946 -26869350 - L1Md_F2 LINE L1 -1 6581 6456 4 1651 318 329 14 42 chrX 139781146 139781289 -26869007 - MER3 DNA MER1_type -14 195 57 4 1651 404 345 34 34 chrX 139782737 139782884 -26867412 - B1F SINE Alu 0 149 3 4 1651 241 328 110 72 chrX 139783167 139783459 -26866837 + L2c LINE L2 3081 3383 -4 4 1651 375 23 0 0 chrX 139783468 139783512 -26866784 + (GGAA)n Simple_repeat Simple_repeat 1 44 0 4 1651 394 324 77 92 chrX 139784498 139784824 -26865472 + ORR1D2 LTR MaLR 48 368 -2 4 1651 300 276 47 19 chrX 139785912 139786019 -26864277 - L3b LINE CR1 -329 153 44 4 1651 2215 109 6 15 chrX 139786495 139786829 -26863467 + L1_Mus3 LINE L1 6303 6633 -5 4 1651 346 220 11 35 chrX 139786894 139787068 -26863228 + GA-rich Low_complexity Low_complexity 2 171 0 4 1651 572 291 43 40 chrX 139787074 139787400 -26862896 + L1MB3 LINE L1 5843 6169 -14 4 1651 362 225 0 43 chrX 139788262 139788355 -26861941 + B4A SINE B4 204 292 0 4 1651 267 157 0 0 chrX 139788380 139788431 -26861865 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1651 383 326 21 28 chrX 139789445 139789590 -26860706 + B1F SINE Alu 1 144 -5 4 1651 962 270 10 0 chrX 139789621 139789821 -26860475 - ID_B1 SINE B4 -22 202 1 4 1651 484 301 51 0 chrX 139789934 139790090 -26860206 - MER103 DNA DNA 0 166 3 4 1651 39 22 0 0 chrX 139790184 139790230 -26860066 + AT_rich Low_complexity Low_complexity 1 46 0 4 1651 351 0 0 0 chrX 139790230 139790269 -26860027 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1651 680 295 36 0 chrX 139790298 139790464 -26859832 - B3A SINE B2 -26 172 1 4 1651 720 89 0 0 chrX 139791000 139791101 -26859195 + (TTCC)n Simple_repeat Simple_repeat 4 104 0 4 1651 783 199 7 0 chrX 139791134 139791275 -26859021 - B1_Mur3 SINE Alu -6 143 2 4 1651 437 259 74 0 chrX 139791339 139791447 -26858849 - PB1D10 SINE Alu 0 117 2 4 1651 1336 230 100 10 chrX 139791615 139792014 -26858282 + Lx9 LINE L1 7195 7629 -15 4 1651 918 66 0 0 chrX 139792037 139792159 -26858137 + (GGAGA)n Simple_repeat Simple_repeat 5 126 0 4 1651 722 360 18 22 chrX 139792392 139792665 -26857631 + B4A SINE B4 1 272 -20 4 1651 549 44 0 0 chrX 139792702 139792770 -26857526 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 1651 270 0 0 0 chrX 139792802 139792832 -26857464 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 1651 761 243 81 39 chrX 139792890 139793041 -26857255 + L1MB7 LINE L1 5628 5780 -404 4 1651 1117 209 132 80 chrX 139793041 139793405 -26856891 + ORR1C2 LTR MaLR 1 383 -1 4 1651 761 243 81 39 chrX 139793405 139793634 -26856662 + L1MB7 LINE L1 5781 6024 -160 4 1651 308 216 0 0 chrX 139793645 139793719 -26856577 + L1MB7 LINE L1 6086 6159 -15 4 1651 225 0 0 0 chrX 139793726 139793751 -26856545 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 4 1651 228 319 22 11 chrX 139794432 139794524 -26855772 + Tigger9a DNA Tigger 574 666 -66 4 1651 400 303 13 38 chrX 139794496 139794654 -26855642 + Tigger9a DNA Tigger 579 732 0 4 1651 1163 62 7 0 chrX 139795563 139795709 -26854587 - B1_Mus1 SINE Alu -1 147 1 4 1651 512 293 65 4 chrX 139796212 139796382 -26853914 - Lx9 LINE L1 -1766 5930 5726 4 1651 447 19 0 0 chrX 139796382 139796434 -26853862 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 1651 512 291 65 3 chrX 139796434 139796541 -26853755 - Lx9 LINE L1 -1895 5749 5635 4 1651 578 14 14 0 chrX 139797307 139797378 -26852918 + (TC)n Simple_repeat Simple_repeat 1 72 0 4 1651 324 263 40 0 chrX 139798258 139798334 -26851962 + PB1D10 SINE Alu 33 111 -6 4 1651 590 263 0 29 chrX 139798469 139798606 -26851690 + B1_Mur3 SINE Alu 2 134 -15 4 1651 303 214 35 12 chrX 139798790 139798875 -26851421 + HAL1 LINE L1 1523 1609 -898 4 1651 192 183 29 118 chrX 139802040 139802108 -26848188 - MIRc SINE MIR -134 134 73 4 1651 916 244 19 0 chrX 139803515 139803724 -26846572 + B3 SINE B2 2 214 -2 4 1651 828 291 5 0 chrX 139803728 139803938 -26846358 - B3 SINE B2 -5 211 1 4 1651 1187 265 68 29 chrX 139804084 139804566 -26845730 + Lx7 LINE L1 5613 6113 -1583 4 1651 1217 288 16 39 chrX 139804575 139804958 -26845338 + Lx7 LINE L1 6221 6594 -1102 4 1651 401 285 52 89 chrX 139804954 139805281 -26845015 + L1M5 LINE L1 3751 4065 -2081 4 1651 236 376 79 0 chrX 139805537 139805638 -26844658 + PB1D7 SINE Alu 5 113 -7 4 1651 303 312 31 23 chrX 139805758 139805886 -26844410 + L1M5 LINE L1 4441 4569 -1577 4 1651 481 280 0 0 chrX 139805904 139806004 -26844292 + B1_Mur1 SINE Alu 45 144 -5 4 1651 351 239 0 156 chrX 139806341 139806450 -26843846 + PB1D10 SINE Alu 18 109 -8 4 1651 895 217 5 18 chrX 139806513 139806734 -26843562 + L1_Rod LINE L1 4805 5022 -825 4 1651 266 281 0 0 chrX 139806727 139806816 -26843480 + Lx6 LINE L1 7326 7414 -46 4 1651 662 143 0 0 chrX 139806838 139806936 -26843360 + B2_Mm2 SINE B2 8 105 -90 4 1651 1068 87 0 0 chrX 139806943 139807092 -26843204 + (TTTCC)n Simple_repeat Simple_repeat 1 149 0 4 1651 246 95 0 0 chrX 139807096 139807138 -26843158 + (TCCCC)n Simple_repeat Simple_repeat 1 42 0 4 1651 795 11 0 0 chrX 139807146 139807238 -26843058 + (TTCTC)n Simple_repeat Simple_repeat 4 95 0 4 1651 2361 62 104 30 chrX 139807238 139807595 -26842701 - Lx LINE L1 -15 6639 6254 4 1651 1518 72 0 0 chrX 139807595 139807789 -26842507 + Lx LINE L1 6068 6261 -393 4 1651 24 77 0 0 chrX 139807830 139807882 -26842414 + AT_rich Low_complexity Low_complexity 1 52 0 4 1651 365 229 127 48 chrX 139808176 139808341 -26841955 - L1MC2 LINE L1 -20 6324 6147 4 1651 796 278 46 58 chrX 139808412 139808843 -26841453 - L1MC2 LINE L1 -378 5966 5541 4 1651 1546 230 63 5 chrX 139808857 139809237 -26841059 + MTD LTR MaLR 18 419 0 4 1651 2211 239 53 71 chrX 139809237 139809614 -26840682 + MTD-int LTR MaLR 1 389 -869 4 1651 3759 51 0 0 chrX 139809614 139810081 -26840215 + L1Md_F2 LINE L1 6115 6581 -1 5 1651 2211 242 62 74 chrX 139810081 139810442 -26839854 + MTD-int LTR MaLR 387 742 -356 4 1651 334 264 141 138 chrX 139810482 139810604 -26839692 - L1MC2 LINE L1 -2240 5545 5438 4 1651 633 237 14 0 chrX 139810604 139810743 -26839553 - B1_Mur1 SINE Alu -6 143 3 5 1651 334 264 141 138 chrX 139810743 139810765 -26839531 - L1MC2 LINE L1 -2348 5437 5427 4 1651 1337 79 16 16 chrX 139810765 139810958 -26839338 - B2_Mm2 SINE B2 -2 193 1 5 1651 510 303 138 64 chrX 139810958 139811322 -26838974 - L1MC2 LINE L1 -2359 5426 5015 4 1651 1859 268 138 44 chrX 139811372 139811925 -26838371 - L1MC2 LINE L1 -1286 4860 4245 4 1651 783 275 42 5 chrX 139811925 139812115 -26838181 - B3A SINE B2 0 198 2 5 1651 1859 268 138 44 chrX 139812115 139812549 -26837747 - L1MC2 LINE L1 -1902 4244 3760 4 1651 512 274 98 22 chrX 139812549 139812732 -26837564 - B3A SINE B2 -1 197 1 5 1651 1859 268 138 44 chrX 139812732 139812953 -26837343 - L1MC2 LINE L1 -2387 3759 3537 4 1651 473 295 150 41 chrX 139813035 139813502 -26836794 - L1MC LINE L1 -984 5162 4645 5 1651 227 188 109 0 chrX 139813725 139813789 -26836507 - L1M4 LINE L1 -1774 4372 4302 5 1651 342 0 0 0 chrX 139813987 139814025 -26836271 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 1651 389 326 7 0 chrX 139814220 139814355 -26835941 - L1M5 LINE L1 -455 5669 5534 5 1651 436 296 50 29 chrX 139815270 139815409 -26834887 + RSINE1 SINE B4 3 144 -21 5 1651 214 363 131 23 chrX 139815409 139815445 -26834851 + B3 SINE B2 2 195 -21 5 1651 288 0 0 0 chrX 139817077 139817109 -26833187 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1651 199 390 24 8 chrX 139817360 139817484 -26832812 + L4 LINE RTE 938 1063 -966 5 1651 228 100 0 0 chrX 139817506 139817546 -26832750 + (A)n Simple_repeat Simple_repeat 1 40 0 5 1651 188 369 91 48 chrX 139817603 139817768 -26832528 + L4 LINE RTE 1174 1345 -684 5 1651 358 114 14 14 chrX 139818858 139818929 -26831367 + (TG)n Simple_repeat Simple_repeat 2 72 0 5 1651 525 308 183 25 chrX 139818958 139819198 -26831098 - B4A SINE B4 -14 278 1 5 1651 204 339 75 45 chrX 139819471 139819604 -26830692 + MIRc SINE MIR 2 138 -130 5 1651 1445 265 25 19 chrX 139819714 139820079 -26830217 + MTEa LTR MaLR 3 369 -10 5 1651 1373 149 14 0 chrX 139820137 139820359 -26829937 - URR1A DNA MER1_type -1 225 1 5 1651 365 225 138 0 chrX 139820501 139820581 -26829715 - PB1D10 SINE Alu -17 100 10 5 1651 253 261 103 93 chrX 139820512 139820609 -26829687 - ID_B1 SINE B4 -57 167 70 5 1651 267 54 0 0 chrX 139825676 139825713 -26824583 + (TCTCTG)n Simple_repeat Simple_repeat 4 40 0 5 1651 212 202 132 77 chrX 139825818 139825909 -26824387 + PB1D10 SINE Alu 21 116 -1 5 1651 26 50 0 0 chrX 139828566 139828606 -26821690 + GC_rich Low_complexity Low_complexity 1 40 0 5 1651 246 358 66 8 chrX 139829699 139829820 -26820476 - MIR3 SINE MIR -53 155 28 5 1651 255 180 0 39 chrX 139830461 139830513 -26819783 - MLT1H2 LTR MaLR -9 480 431 5 1651 465 298 127 28 chrX 139830822 139831209 -26819087 - L1MD2 LINE L1 -508 5851 5427 5 1651 258 198 78 19 chrX 139831215 139831318 -26818978 + L1MD LINE L1 4608 4716 -1430 5 1651 249 209 30 0 chrX 139831563 139831630 -26818666 - L1MC LINE L1 -914 5232 5164 5 1651 519 286 78 60 chrX 139831711 139831994 -26818302 - B4A SINE B4 -4 288 1 5 1651 802 297 97 28 chrX 139832007 139832617 -26817679 - L1MD2 LINE L1 -1007 5139 4488 5 1651 858 234 69 33 chrX 139832965 139833239 -26817057 - Lx9 LINE L1 -451 7193 6910 5 1651 380 302 5 106 chrX 139833239 139833428 -26816868 - L1MD2 LINE L1 -1654 4492 4323 5 1651 333 153 49 203 chrX 139833444 139833567 -26816729 + RLTR25B LTR ERVK 406 509 -519 5 1651 894 36 0 0 chrX 139833499 139833609 -26816687 + B1_Mus1 SINE Alu 38 147 -1 5 1651 336 244 0 0 chrX 139833622 139833712 -26816584 + GA-rich Low_complexity Low_complexity 3 92 0 5 1651 225 0 0 0 chrX 139833712 139833737 -26816559 + (GGAA)n Simple_repeat Simple_repeat 1 25 0 5 1651 1458 237 65 0 chrX 139833744 139834098 -26816198 + Lx9 LINE L1 7089 7465 -179 5 1651 411 38 0 0 chrX 139834108 139834161 -26816135 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1651 846 239 65 10 chrX 139834391 139834590 -26815706 - B3 SINE B2 -6 210 1 5 1651 286 363 120 73 chrX 139834931 139835314 -26814982 + MLT1I LTR MaLR 9 409 -2 5 1651 344 326 37 79 chrX 139837178 139837368 -26812928 + MER102c DNA MER1_type 145 326 -5 5 1651 524 279 23 75 chrX 139837390 139837564 -26812732 - MER63A DNA AcHobo -26 184 20 5 1651 183 114 0 0 chrX 139837656 139837691 -26812605 + (T)n Simple_repeat Simple_repeat 1 35 0 5 1651 299 252 150 36 chrX 139838681 139838821 -26811475 + MIR3 SINE MIR 33 188 -20 5 1651 483 18 0 0 chrX 139840037 139840093 -26810203 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1651 1725 254 61 8 chrX 139840844 139841237 -26809059 + MTD LTR MaLR 6 419 0 5 1651 262 234 20 41 chrX 139842009 139842107 -26808189 - Lx8 LINE L1 -22 7451 7356 5 1651 3464 239 37 6 chrX 139842142 139843012 -26807284 - Lx8 LINE L1 -186 7287 6391 5 1651 3136 159 9 30 chrX 139843121 139843691 -26806605 - RMER6A LTR ERVK -14 742 185 5 1651 484 152 0 0 chrX 139843660 139843739 -26806557 - RMER6A LTR ERVK -379 82 4 5 1651 306 0 0 0 chrX 139844142 139844176 -26806120 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 1651 358 331 53 81 chrX 139844209 139844492 -26805804 - L1ME3B LINE L1 -230 6010 5736 5 1651 225 309 43 14 chrX 139844672 139844741 -26805555 + B2_Mm2 SINE B2 3 73 -122 5 1651 530 273 33 53 chrX 139844886 139845037 -26805259 + B3A SINE B2 47 194 -4 5 1651 23 33 0 0 chrX 139845837 139845867 -26804429 + AT_rich Low_complexity Low_complexity 1 30 0 5 1651 266 292 119 32 chrX 139845992 139846211 -26804085 - L1MD3 LINE L1 -28 7967 7730 5 1651 1520 287 62 21 chrX 139846391 139847410 -26802886 - Lx8 LINE L1 -1011 6462 5386 5 1651 1907 317 112 8 chrX 139847395 139848298 -26801998 + Lx8 LINE L1 6476 7472 -1 5 1651 1329 209 81 106 chrX 139848931 139849338 -26800958 + RMER1B Other Other 53 449 -617 5 1651 2705 264 182 6 chrX 139849407 139850276 -26800020 + RMER1A Other Other 8 1029 -1 5 1651 4447 38 2 0 chrX 139850279 139850836 -26799460 - L1Md_F2 LINE L1 -57 5826 5269 5 1651 5823 58 16 1 chrX 139850836 139851582 -26798714 + L1Md_F2 LINE L1 5825 6581 -1 5 1651 211 269 124 78 chrX 139851583 139851736 -26798560 + MIRc SINE MIR 42 201 -67 5 1651 993 309 67 53 chrX 139852819 139853342 -26796954 - Lx8 LINE L1 -931 6542 6013 5 206 6629 152 14 5 chrX 139853399 139854521 -26795775 + Lx2B LINE L1 5868 6999 -1 5 1652 13077 122 24 5 chrX 139854525 139857408 -26792888 + L1Md_F LINE L1 387 3326 -2557 5 1652 6013 72 20 4 chrX 139857408 139858242 -26792054 + L1_Mus1 LINE L1 5720 6567 0 5 1652 213 171 0 24 chrX 139858322 139858364 -26791932 + A-rich Low_complexity Low_complexity 4 44 0 5 1652 598 183 23 8 chrX 139858497 139858629 -26791667 - Lx7 LINE L1 -388 7308 7175 5 1652 376 278 28 125 chrX 139858623 139858817 -26791479 - L1_Mur3 LINE L1 -3128 2752 2590 5 1652 2803 203 41 5 chrX 139858817 139859400 -26790896 - Lx5 LINE L1 -1 7049 6446 5 1652 376 278 28 125 chrX 139859400 139859526 -26790770 - L1_Mur3 LINE L1 -3291 2589 2463 5 1652 23 0 0 0 chrX 139859663 139859686 -26790610 + AT_rich Low_complexity Low_complexity 1 23 0 5 1652 377 286 121 17 chrX 139859686 139859860 -26790436 - Lx8 LINE L1 -2 7471 7280 5 1652 719 301 166 34 chrX 139859983 139860430 -26789866 - L2 LINE L2 -1171 2248 1743 5 1652 238 307 128 73 chrX 139860493 139860602 -26789694 + MER5B DNA MER1_type 4 118 -60 5 1652 300 27 0 0 chrX 139860602 139860639 -26789657 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 1652 789 11 0 0 chrX 139860639 139860728 -26789568 + (GA)n Simple_repeat Simple_repeat 1 90 0 5 1652 276 379 29 0 chrX 139861424 139861527 -26788769 + MLT1H2 LTR MaLR 79 184 -305 5 1652 726 293 9 1 chrX 139861708 139861912 -26788384 - MTE2b LTR MaLR -2 377 169 5 1652 226 143 161 0 chrX 139862094 139862150 -26788146 - Lx9 LINE L1 -484 7160 7096 5 1652 303 270 123 53 chrX 139862165 139862392 -26787904 + L1M5 LINE L1 2527 2769 -3377 5 1652 547 307 117 24 chrX 139862406 139862823 -26787473 + MLT1C LTR MaLR 13 467 0 5 1652 273 262 92 0 chrX 139862826 139862967 -26787329 + L1M5 LINE L1 2773 2926 -3220 5 1652 533 272 51 7 chrX 139863180 139863317 -26786979 + B3A SINE B2 1 143 -55 5 1652 324 70 0 0 chrX 139863341 139863384 -26786912 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 1652 367 337 62 15 chrX 139863403 139863792 -26786504 + L1M5 LINE L1 3418 3824 -2322 5 1652 239 282 12 0 chrX 139863868 139863953 -26786343 + L1MC LINE L1 3961 4046 -2100 5 1652 25 0 0 0 chrX 139863955 139863980 -26786316 + AT_rich Low_complexity Low_complexity 1 25 0 5 1652 1230 54 0 0 chrX 139863980 139864128 -26786168 - B1_Mus1 SINE Alu 0 148 1 5 1652 7851 49 20 1 chrX 139864234 139865931 -26784365 - L1Md_F2 LINE L1 -2 6580 4838 5 1652 286 275 14 42 chrX 139866004 139866076 -26784220 + B4A SINE B4 41 110 -182 5 1652 349 316 58 0 chrX 139866208 139866363 -26783933 + L1M5 LINE L1 4231 4394 -1752 5 1652 535 339 44 22 chrX 139866388 139866569 -26783727 - MLT1A0 LTR MaLR -109 256 72 5 1652 1695 116 11 22 chrX 139866769 139867043 -26783253 + L1_Mus3 LINE L1 6365 6635 -3 5 1652 399 179 36 0 chrX 139867330 139867414 -26782882 - Lx3B LINE L1 -12 6961 6875 5 1652 192 77 0 0 chrX 139867588 139867614 -26782682 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1652 629 52 2 6 chrX 139867614 139867705 -26782591 - B1_Mm SINE Alu 0 147 33 5 1652 427 313 110 53 chrX 139867902 139868111 -26782185 + Tigger5 DNA MER2_type 1 221 -2185 5 1652 202 300 111 12 chrX 139868292 139868373 -26781923 + MIR3 SINE MIR 72 160 -48 5 1652 345 333 64 14 chrX 139869604 139869622 -26780674 + B1_Mur4 SINE Alu 3 149 -1 5 1652 600 221 25 0 chrX 139869622 139869744 -26780552 + ID_B1 SINE B4 99 223 -1 5 1652 2318 72 110 39 chrX 139869955 139870319 -26779977 - RLTR10 LTR ERVK 0 390 1 5 1652 268 360 45 0 chrX 139870807 139870896 -26779400 + PB1D9 SINE Alu 2 94 -26 5 1652 380 264 60 10 chrX 139871054 139871185 -26779111 - B3A SINE B2 -13 203 70 5 1652 371 302 8 79 chrX 139871217 139871343 -26778953 - MTEa LTR MaLR -258 121 5 5 1652 292 295 0 11 chrX 139871552 139871641 -26778655 - MIRb SINE MIR 0 268 181 5 1652 369 366 129 35 chrX 139871681 139871967 -26778329 - MER102b DNA MER1_type -28 313 1 5 1652 943 132 7 13 chrX 139872368 139872522 -26777774 + URR1A DNA MER1_type 71 223 -3 5 1652 393 188 0 0 chrX 139872575 139872660 -26777636 + CT-rich Low_complexity Low_complexity 2 86 0 6 1652 776 221 0 13 chrX 139873204 139873355 -26776941 - B1_Mur2 SINE Alu 0 149 1 6 1652 245 350 32 8 chrX 139873747 139873871 -26776425 + MamRep4096 DNA hAT? 162 288 -138 6 1652 874 345 94 39 chrX 139874312 139874662 -26775634 - MLT1G LTR MaLR -64 527 164 6 1652 360 0 0 0 chrX 139874662 139874702 -26775594 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1652 874 345 94 39 chrX 139874702 139874842 -26775454 - MLT1G LTR MaLR -428 163 11 6 1652 318 300 58 29 chrX 139874965 139875068 -26775228 + RMER1B Other Other 34 139 -927 6 1652 996 267 169 34 chrX 139875279 139876155 -26774141 + RMER1B Other Other 166 1338 -4 6 1652 383 337 50 17 chrX 139878072 139878253 -26772043 + MIR SINE MIR 52 238 -24 6 1652 279 173 0 0 chrX 139878253 139878305 -26771991 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 6 1652 268 344 88 19 chrX 139878371 139878565 -26771731 + MIRb SINE MIR 59 264 -12 6 1652 367 251 107 78 chrX 139879938 139880101 -26770195 + MIR SINE MIR 38 192 -76 6 1652 426 355 60 5 chrX 139881242 139881460 -26768836 + MIR SINE MIR 1 230 -32 6 1652 283 231 0 71 chrX 139881460 139881530 -26768766 - RLTR17 LTR ERVK 0 692 628 6 1652 2220 203 8 43 chrX 139881505 139881989 -26768307 - RLTR31A_Mm LTR ERVK -116 468 2 6 1652 225 0 0 0 chrX 139882431 139882456 -26767840 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1652 248 283 32 32 chrX 139883976 139884071 -26766225 - BC1_Mm scRNA scRNA -53 99 5 6 1652 1080 174 75 63 chrX 139884132 139884451 -26765845 - Lx7 LINE L1 0 7696 7374 6 1652 567 112 0 0 chrX 139884467 139884574 -26765722 + (TA)n Simple_repeat Simple_repeat 1 107 0 6 1652 4000 189 71 21 chrX 139884623 139885442 -26764854 + RMER13A LTR ERVK 1 860 0 6 1652 1865 198 62 7 chrX 139885564 139886001 -26764295 - Lx7 LINE L1 -411 7285 6825 6 1652 1532 128 6 138 chrX 139886307 139886634 -26763662 - ORR1A3 LTR MaLR -42 284 1 6 1652 7359 116 33 2 chrX 139886634 139887761 -26762535 - ORR1A3-int LTR MaLR 0 1963 802 6 1652 2127 199 23 169 chrX 139887761 139888576 -26761720 - ORR1A0-int LTR MaLR -932 1031 336 6 1652 27 0 0 0 chrX 139888641 139888668 -26761628 + AT_rich Low_complexity Low_complexity 1 27 0 6 1652 9414 71 9 5 chrX 139888668 139890667 -26759629 - L1Md_F2 LINE L1 -5 6577 4573 6 1652 11318 84 3 1 chrX 139890671 139891603 -26758693 - L1Md_F2 LINE L1 -2988 2895 1965 6 1652 189 0 0 0 chrX 139891603 139891624 -26758672 + (TC)n Simple_repeat Simple_repeat 2 22 0 6 1652 11318 106 21 12 chrX 139891624 139893143 -26757153 - L1Md_F2 LINE L1 -3919 1964 427 6 1652 2050 161 11 22 chrX 139893143 139893556 -26756740 - ORR1A0-int LTR MaLR -1376 416 1 6 1652 2083 154 3 9 chrX 139893556 139893904 -26756392 - ORR1A0 LTR MaLR 0 346 1 6 1652 5268 162 62 16 chrX 139893904 139895335 -26754961 - L1_Mur3 LINE L1 -4297 1583 81 6 1652 5079 70 0 0 chrX 139895335 139895988 -26754308 + L1Md_T LINE L1 5930 6582 0 6 1652 1364 206 88 114 chrX 139895988 139896226 -26754070 - L1_Mur3 LINE L1 -7405 307 129 6 1652 604 152 10 0 chrX 139896695 139896794 -26753502 - L1_Mur3 LINE L1 -7083 629 530 6 1652 553 303 42 33 chrX 139896804 139897019 -26753277 - Charlie4a DNA MER1_type -210 298 82 6 1652 681 278 59 18 chrX 139898126 139898346 -26751950 + MIR SINE MIR 33 261 -1 6 1652 384 274 69 13 chrX 139898427 139898561 -26751735 + MIRb SINE MIR 85 229 -33 6 1652 214 296 99 0 chrX 139899114 139899185 -26751111 + MER5A DNA MER1_type 59 136 -53 6 1652 2800 114 11 14 chrX 139899408 139899843 -26750453 + Lx2 LINE L1 6562 6995 -2 6 1652 221 214 24 0 chrX 139899892 139899934 -26750362 + PB1 SINE Alu 78 120 -7 6 1652 252 86 0 0 chrX 139899935 139899970 -26750326 + (TA)n Simple_repeat Simple_repeat 2 36 0 6 1652 243 0 0 0 chrX 139899971 139899998 -26750298 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1652 387 225 288 23 chrX 139900046 139900178 -26750118 + MER5A DNA MER1_type 23 189 0 6 1652 575 267 197 5 chrX 139900712 139900900 -26749396 - MIRb SINE MIR -16 252 29 6 1652 462 365 86 57 chrX 139900984 139901333 -26748963 - L2a LINE L2 -53 3373 3015 6 1652 23 86 0 0 chrX 139901428 139901486 -26748810 + AT_rich Low_complexity Low_complexity 1 58 0 6 1652 1397 194 118 36 chrX 139901557 139901921 -26748375 + ORR1B1 LTR MaLR 1 394 0 6 1652 1146 292 3 18 chrX 139902015 139902301 -26747995 + MTEa LTR MaLR 83 364 -15 6 1652 379 264 86 23 chrX 139902898 139903026 -26747270 - RMER15 LTR ERVL -26 549 414 6 1652 1114 185 104 4 chrX 139903039 139903288 -26747008 + RLTR46 LTR ERVK 42 315 -5 6 1652 1235 39 0 0 chrX 139903547 139903702 -26746594 + L1_Mm LINE L1 2327 2481 -3402 6 1652 1833 267 33 19 chrX 139903703 139904280 -26746016 + Lx8 LINE L1 6207 6791 -682 6 1652 793 49 89 0 chrX 139904300 139904423 -26745873 - L1Md_F3 LINE L1 -2 6582 6449 6 1652 2468 101 58 25 chrX 139904423 139904821 -26745475 + IAPLTR2_Mm LTR ERVK 1 411 0 6 1652 892 99 31 95 chrX 139904823 139905038 -26745258 + IAPEz-int LTR ERVK 3 204 -1783 6 1652 240 250 0 0 chrX 139905045 139905089 -26745207 + RLTR27 LTR ERVK 232 275 -34 6 1652 3631 65 2 18 chrX 139905089 139905592 -26744704 + IAPEz-int LTR ERVK 168 662 -5819 6 1652 2049 75 0 0 chrX 139905592 139905870 -26744426 + IAPEz-int LTR ERVK 1359 1636 -4845 6 1652 5874 38 4 12 chrX 139905869 139906619 -26743677 + IAPEz-int LTR ERVK 5736 6479 -2 6 1652 3004 73 49 76 chrX 139906621 139907109 -26743187 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1652 2045 75 14 7 chrX 139907110 139907397 -26742899 - IAPLTR2_Mm LTR ERVK -211 264 1 6 1652 2725 79 28 2 chrX 139907397 139907792 -26742504 + IAPEz-int LTR ERVK 6075 6479 -2 6 1652 2611 98 133 7 chrX 139907794 139908216 -26742080 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1652 1417 58 26 0 chrX 139908216 139908406 -26741890 - L1Md_F3 LINE L1 -130 6454 6260 6 1652 6875 74 2 23 chrX 139908389 139909983 -26740313 - L1Md_F3 LINE L1 -3725 2158 607 6 1652 1128 320 81 6 chrX 139909992 139910388 -26739908 + Lx8 LINE L1 6800 7215 -258 6 1652 525 44 0 0 chrX 139910388 139910456 -26739840 + (GA)n Simple_repeat Simple_repeat 1 68 0 6 1652 1128 320 81 6 chrX 139910456 139910593 -26739703 + Lx8 LINE L1 7216 7372 -101 6 1652 3377 111 54 22 chrX 139910628 139911163 -26739133 + Lx LINE L1 6103 6654 0 6 1652 242 303 11 83 chrX 139911261 139911441 -26738855 + MER112 DNA MER1_type 87 253 -8 6 1652 258 310 25 58 chrX 139911448 139911568 -26738728 - L2 LINE L2 -502 2917 2802 6 1652 299 374 48 75 chrX 139911710 139912183 -26738113 - L2a LINE L2 -3 3423 2958 6 1652 1422 220 149 3 chrX 139912703 139913058 -26737238 - MTD LTR MaLR -8 411 5 6 1652 230 338 15 0 chrX 139913452 139913520 -26736776 + MER20 DNA MER1_type 2 70 -149 6 1652 3391 71 0 0 chrX 139914262 139914686 -26735610 - L1_Mus1 LINE L1 0 6567 6144 6 1652 902 300 78 21 chrX 139914741 139915088 -26735208 + MLT1A0 LTR MaLR 1 408 0 6 1652 3125 86 5 5 chrX 139915091 139915521 -26734775 - L1Md_F2 LINE L1 -2 6580 6151 6 1652 8287 75 1 5 chrX 139915521 139917338 -26732958 - L1Md_F2 LINE L1 -7 6575 4769 6 1652 776 48 0 0 chrX 139917547 139917652 -26732644 - SYNREP_MM Satellite Satellite -53 213 109 6 1652 4226 108 3 37 chrX 139917676 139918331 -26731965 + L1Md_F2 LINE L1 5939 6571 -11 6 1652 1261 276 21 67 chrX 139918410 139918798 -26731498 - MTEb LTR MaLR -9 370 1 6 1652 596 300 34 17 chrX 139918803 139919152 -26731144 + L1M4 LINE L1 4415 4769 -1377 6 1652 689 273 78 19 chrX 139919158 139919416 -26730880 + Lx8 LINE L1 7199 7471 -2 6 1652 444 302 78 5 chrX 139919445 139919651 -26730645 + L1M4 LINE L1 4773 4993 -1153 6 1652 635 222 6 7 chrX 139919650 139919797 -26730499 + L1_Rod LINE L1 4690 4869 -1014 6 1652 204 213 0 0 chrX 139919799 139919860 -26730436 + GA-rich Low_complexity Low_complexity 4 64 0 6 1652 575 143 19 9 chrX 139919864 139919970 -26730326 + L1_Rod LINE L1 4806 4912 -935 6 1652 987 141 73 0 chrX 139920261 139920438 -26729858 + Lx3C LINE L1 6773 6962 -14 6 1652 342 0 0 0 chrX 139920440 139920478 -26729818 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 6 1652 1129 258 53 28 chrX 139920648 139921082 -26729214 + L1M4 LINE L1 5347 5791 -389 6 1652 217 51 51 0 chrX 139921190 139921229 -26729067 + (CAAAC)n Simple_repeat Simple_repeat 2 42 0 6 1652 479 321 107 14 chrX 139921452 139921667 -26728629 - MIRb SINE MIR -8 260 26 6 1652 232 224 20 0 chrX 139921953 139922002 -26728294 - L2 LINE L2 -556 2863 2814 6 1652 1424 84 5 0 chrX 139922529 139922719 -26727577 - B2_Mm1t SINE B2 -2 191 1 6 1652 192 369 36 29 chrX 139923531 139923668 -26726628 - MIR3 SINE MIR -50 158 21 6 1652 477 90 0 0 chrX 139924395 139924462 -26725834 + (CTG)n Simple_repeat Simple_repeat 2 68 0 6 1652 289 355 48 0 chrX 139924560 139924684 -26725612 - MIR SINE MIR -121 141 12 6 1652 414 350 0 60 chrX 139924892 139925041 -26725255 - RSINE1 SINE B4 -14 151 12 6 1652 300 326 7 44 chrX 139925108 139925243 -26725053 + L2a LINE L2 3253 3382 -44 6 1652 444 283 92 52 chrX 139925244 139925455 -26724841 + B4A SINE B4 1 229 -63 6 1652 881 330 63 66 chrX 139925876 139926301 -26723995 - MER63B DNA AcHobo -11 425 2 6 1652 500 333 70 0 chrX 139926693 139926906 -26723390 + MIR SINE MIR 2 229 -33 6 1652 410 395 5 11 chrX 139927432 139927619 -26722677 - MER63A DNA AcHobo 0 210 25 6 1652 333 0 0 0 chrX 139928770 139928807 -26721489 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1652 197 33 0 32 chrX 139929822 139929853 -26720443 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 6 1652 869 82 25 0 chrX 139929865 139929987 -26720309 + B2_Mm2 SINE B2 8 132 -63 6 1652 207 0 0 0 chrX 139930011 139930034 -26720262 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 6 1652 409 355 54 69 chrX 139930043 139930474 -26719822 + L1M4c LINE L1 1603 2154 -4790 6 1652 413 250 0 8 chrX 139930497 139930626 -26719670 + L1M4c LINE L1 2095 2209 -4641 6 1652 1874 188 125 3 chrX 139930793 139931161 -26719135 + MTC LTR MaLR 1 413 -8 6 1652 3233 174 4 79 chrX 139931233 139931351 -26718945 + L1_Mur1 LINE L1 3731 3814 -2066 6 1652 4198 75 76 7 chrX 139931351 139931959 -26718337 + L1_Mus3 LINE L1 5989 6638 0 6 1652 4395 77 5 2 chrX 139931959 139932605 -26717691 + L1_Mur1 LINE L1 3813 4446 -1440 6 1652 306 339 112 40 chrX 139932788 139933037 -26717259 - L2 LINE L2 -778 2641 2375 6 1652 337 242 205 21 chrX 139933283 139933473 -26716823 + L1MB5 LINE L1 5914 6138 -36 6 1652 802 182 7 20 chrX 139933478 139933624 -26716672 + B1_Mur3 SINE Alu 1 144 -5 6 1652 333 203 21 76 chrX 139934772 139934876 -26715420 - L1MA7 LINE L1 -36 6276 6175 6 1652 867 181 228 0 chrX 139934939 139935110 -26715186 - B3 SINE B2 -6 210 1 6 1652 897 276 34 39 chrX 139935173 139935584 -26714712 - L1MA7 LINE L1 -202 6089 5681 6 1652 212 319 121 26 chrX 139936280 139936396 -26713900 + MIRb SINE MIR 86 212 -56 6 1652 222 174 0 0 chrX 139936808 139936854 -26713442 + GA-rich Low_complexity Low_complexity 3 48 0 6 1652 342 0 0 0 chrX 139937227 139937265 -26713031 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 1652 257 389 7 14 chrX 139937336 139937477 -26712819 - MIRb SINE MIR -8 260 121 7 1652 562 294 7 14 chrX 139937632 139937780 -26712516 - ID_B1 SINE B4 0 224 78 7 1652 403 336 14 20 chrX 139937944 139938090 -26712206 + MER63B DNA AcHobo 278 422 -14 7 1652 396 347 63 26 chrX 139938133 139938334 -26711962 - MIRc SINE MIR -32 230 34 7 1652 557 320 6 61 chrX 139939001 139939164 -26711132 + RSINE1 SINE B4 12 165 0 7 1652 763 68 159 0 chrX 139939187 139939319 -26710977 + L1_Mus3 LINE L1 6481 6633 -5 7 1652 4712 110 46 8 chrX 139939423 139940136 -26710160 - Lx2 LINE L1 0 6997 6258 7 1652 773 152 43 7 chrX 139940152 139940291 -26710005 - B1_Mur4 SINE Alu -6 144 1 7 1652 22 0 0 0 chrX 139940890 139940912 -26709384 + AT_rich Low_complexity Low_complexity 1 22 0 7 1652 948 158 35 5 chrX 139940920 139941099 -26709197 + B2_Mm2 SINE B2 1 175 -18 7 1652 373 306 80 40 chrX 139941110 139941311 -26708985 + L1MEc LINE L1 1295 1503 -4897 7 1652 891 281 85 10 chrX 139941369 139941944 -26708352 + L1MEc LINE L1 1720 2337 -4063 7 1652 302 327 37 9 chrX 139941945 139942053 -26708243 + PB1D10 SINE Alu 5 115 -2 7 1652 275 288 0 27 chrX 139942097 139942172 -26708124 + BC1_Mm scRNA scRNA 14 86 -66 7 1652 298 53 0 0 chrX 139942210 139942248 -26708048 - B2_Mm2 SINE B2 -80 115 78 7 1652 467 17 17 0 chrX 139942263 139942323 -26707973 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 7 1652 2636 205 55 2 chrX 139942323 139942900 -26707396 - Lx9 LINE L1 -588 7056 6449 7 1652 1414 230 82 38 chrX 139942898 139943372 -26706924 + Lx9 LINE L1 7147 7641 -3 7 1652 310 264 68 23 chrX 139943441 139943573 -26706723 + L1MEc LINE L1 3018 3155 -3164 7 1652 234 221 29 0 chrX 139943704 139943772 -26706524 + L1MEc LINE L1 3397 3466 -2853 7 1652 967 261 106 28 chrX 139943963 139944528 -26705768 + L1MEc LINE L1 3682 4290 -2029 7 1652 466 181 12 12 chrX 139944530 139944614 -26705682 - B3 SINE B2 -131 85 2 7 1652 381 296 101 17 chrX 139944684 139944980 -26705316 - L1M5 LINE L1 -2138 4008 3688 7 1652 336 270 60 27 chrX 139945380 139945510 -26704786 + RMER1C Other Other 748 865 -477 7 1652 452 191 0 11 chrX 139945618 139945713 -26704583 + RMER1C Other Other 882 975 -367 7 1652 464 347 113 42 chrX 139945739 139946121 -26704175 - L1M5 LINE L1 -2705 3441 3033 7 1652 23 0 0 0 chrX 139946324 139946347 -26703949 + AT_rich Low_complexity Low_complexity 1 23 0 7 1652 348 24 0 0 chrX 139946362 139946403 -26703893 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 7 1652 518 240 0 40 chrX 139946424 139946524 -26703772 - RSINE1 SINE B4 -68 97 2 7 1652 22 0 0 0 chrX 139946524 139946546 -26703750 + AT_rich Low_complexity Low_complexity 1 22 0 7 1652 411 182 36 0 chrX 139946551 139946688 -26703608 - Lx9 LINE L1 -8 7636 7495 7 1652 526 182 16 16 chrX 139946706 139946829 -26703467 - Lx9 LINE L1 -282 7362 7240 7 1652 548 287 95 5 chrX 139946840 139947029 -26703267 - B3 SINE B2 -10 206 1 7 1652 209 208 0 70 chrX 139947262 139947319 -26702977 + T-rich Low_complexity Low_complexity 3 55 0 7 1652 2469 231 75 5 chrX 139947728 139948486 -26701810 - L1MA5 LINE L1 -11 6289 5479 7 1652 255 280 13 13 chrX 139948663 139948739 -26701557 - ID4 SINE ID -6 77 2 7 1652 326 325 70 9 chrX 139948739 139948854 -26701442 - B1F SINE Alu -10 139 18 7 1652 23 0 0 0 chrX 139949025 139949048 -26701248 + AT_rich Low_complexity Low_complexity 1 23 0 7 1652 780 204 72 5 chrX 139949049 139949200 -26701096 - Lx9 LINE L1 -1 7643 7478 7 1652 264 91 0 0 chrX 139949200 139949244 -26701052 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1652 780 204 72 5 chrX 139949244 139949299 -26700997 - Lx9 LINE L1 -167 7477 7423 7 1652 1329 165 8 28 chrX 139950062 139950317 -26699979 + Lx4A LINE L1 6808 7057 -1 7 1652 653 239 15 0 chrX 139950992 139951126 -26699170 + B1_Mur1 SINE Alu 6 141 -8 7 1652 1469 123 27 5 chrX 139951126 139951346 -26698950 + URR1B DNA MER1_type 1 225 0 7 1652 442 306 63 37 chrX 139952051 139952241 -26698055 + MIRc SINE MIR 60 254 -14 7 1652 215 333 0 17 chrX 139953120 139953236 -26697060 + CT-rich Low_complexity Low_complexity 3 116 0 7 1652 1428 34 0 0 chrX 139953902 139954080 -26696216 + (TC)n Simple_repeat Simple_repeat 2 179 0 7 1652 372 59 0 0 chrX 139954080 139954130 -26696166 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 1652 600 313 116 91 chrX 139954774 139955136 -26695160 - L2b LINE L2 -16 3371 3001 7 1652 21 0 0 0 chrX 139955397 139955418 -26694878 + AT_rich Low_complexity Low_complexity 1 21 0 7 1652 636 14 0 0 chrX 139956699 139956772 -26693524 + (TCC)n Simple_repeat Simple_repeat 2 74 0 7 1652 259 154 0 0 chrX 139956772 139956811 -26693485 - ORR1C2 LTR MaLR 0 384 346 7 1652 241 213 0 62 chrX 139957063 139957128 -26693168 - ORR1C2 LTR MaLR -95 289 229 7 1652 180 77 0 0 chrX 139957128 139957154 -26693142 + (TCC)n Simple_repeat Simple_repeat 3 28 0 7 1652 566 262 61 45 chrX 139958299 139958431 -26691865 - RSINE1 SINE B4 -28 137 4 7 1652 522 351 56 18 chrX 139958787 139959179 -26691117 + Lx9 LINE L1 7119 7525 -119 7 1652 627 216 25 6 chrX 139959287 139959450 -26690846 + Lx7 LINE L1 7251 7416 -280 7 1652 510 17 0 0 chrX 139959513 139959572 -26690724 + (GA)n Simple_repeat Simple_repeat 1 59 0 7 1652 275 364 37 30 chrX 139959996 139960296 -26690000 - L1MC LINE L1 -2051 5831 5530 7 1652 393 206 152 14 chrX 139960348 139960486 -26689810 - Lx6 LINE L1 -27 7433 7277 7 1652 1394 65 16 11 chrX 139960899 139961085 -26689211 - B2_Mm2 SINE B2 -7 188 2 7 1652 234 347 17 67 chrX 139961310 139961489 -26688807 + Lx7 LINE L1 7121 7290 -406 7 1652 1206 53 0 0 chrX 139961575 139961754 -26688542 + L1_Mus1 LINE L1 6414 6567 0 7 1652 378 42 0 0 chrX 139962916 139962964 -26687332 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 1652 474 296 71 158 chrX 139962986 139963261 -26687035 - B4 SINE B4 -16 276 19 7 1652 217 240 0 0 chrX 139963509 139963559 -26686737 + GA-rich Low_complexity Low_complexity 3 52 0 7 1652 256 318 97 60 chrX 139963594 139963728 -26686568 + MIR3 SINE MIR 30 168 -40 7 1652 220 280 108 31 chrX 139963779 139963908 -26686388 + MER5B DNA MER1_type 11 149 -29 7 1652 498 318 52 6 chrX 139964624 139964798 -26685498 - MIR SINE MIR -13 249 68 7 1652 506 355 29 88 chrX 139965804 139966115 -26684181 + B4A SINE B4 1 281 -11 7 1652 761 231 25 19 chrX 139966240 139966399 -26683897 + RSINE1 SINE B4 2 161 -4 7 1652 360 0 0 0 chrX 139966399 139966439 -26683857 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 1652 397 296 84 7 chrX 139966456 139966599 -26683697 - Tigger5 DNA MER2_type -81 2325 2172 7 1652 22 0 0 0 chrX 139966683 139966705 -26683591 + AT_rich Low_complexity Low_complexity 1 22 0 7 1652 1244 41 0 0 chrX 139966705 139966851 -26683445 - B1_Mm SINE Alu 0 147 2 7 1652 1470 229 44 58 chrX 139966996 139967339 -26682957 - ORR1C1 LTR MaLR -35 343 6 7 1652 188 297 86 92 chrX 139967541 139967704 -26682592 + MIR SINE MIR 64 225 -37 7 1652 656 375 112 42 chrX 139968799 139969549 -26680747 - L2b LINE L2 -15 3360 2562 7 1652 186 286 0 20 chrX 139970363 139970413 -26679883 - MER5A DNA MER1_type -78 111 63 7 1652 342 328 104 52 chrX 139971170 139971382 -26678914 - L2 LINE L2 -375 3044 2822 7 1652 1724 244 13 19 chrX 139971642 139972014 -26678282 - ORR1D2 LTR MaLR 0 370 1 7 1652 476 290 129 62 chrX 139972014 139972281 -26678015 + ORR1E LTR MaLR 68 352 -7 7 1652 228 290 86 48 chrX 139972303 139972408 -26677888 + MER5A DNA MER1_type 81 189 0 7 1652 198 0 0 0 chrX 139973456 139973478 -26676818 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 7 1652 708 308 64 9 chrX 139974241 139974585 -26675711 - Lx8 LINE L1 0 7473 7111 7 1652 564 193 55 7 chrX 139974599 139974725 -26675571 - B1_Mur3 SINE Alu -21 126 1 7 1652 7783 48 0 0 chrX 139974906 139975902 -26674394 - L1Md_T LINE L1 0 6582 5587 7 1652 1225 58 0 0 chrX 139976481 139976635 -26673661 + B2_Mm2 SINE B2 1 154 -41 7 1652 450 0 0 0 chrX 139976636 139976686 -26673610 + (TAAA)n Simple_repeat Simple_repeat 4 53 0 7 1652 225 178 0 0 chrX 139976836 139976881 -26673415 + (TAA)n Simple_repeat Simple_repeat 3 47 0 7 1652 584 270 24 0 chrX 139976893 139977019 -26673277 + B1F SINE Alu 19 147 -2 7 1652 303 385 45 10 chrX 139977021 139977223 -26673073 - MIRb SINE MIR 0 268 60 7 1652 370 289 42 49 chrX 139977307 139977449 -26672847 - MER5A1 DNA MER1_type -1 165 25 7 1652 203 103 0 25 chrX 139977788 139977828 -26672468 + (GCTG)n Simple_repeat Simple_repeat 1 39 0 7 1652 393 198 0 40 chrX 139978665 139978765 -26671531 - PB1D10 SINE Alu -51 97 5 7 1652 338 289 64 36 chrX 139978765 139978905 -26671391 - MIRb SINE MIR -109 159 16 7 1652 188 170 0 41 chrX 139979334 139979383 -26670913 + GA-rich Low_complexity Low_complexity 3 49 0 7 1652 354 256 152 24 chrX 139979416 139979580 -26670716 + L1ME4a LINE L1 5811 5995 -129 7 1652 320 94 19 0 chrX 139979602 139979655 -26670641 + (TA)n Simple_repeat Simple_repeat 1 54 0 7 1652 222 272 43 21 chrX 139979941 139979957 -26670339 - B4 SINE B4 -195 97 2 7 1652 438 205 0 0 chrX 139979957 139980035 -26670261 - B3A SINE B2 -119 79 2 7 1652 236 283 142 0 chrX 139980046 139980166 -26670130 - L1M4 LINE L1 -310 5864 5728 7 1652 1074 281 96 18 chrX 139980219 139980824 -26669472 - L1M4 LINE L1 -901 5245 4594 7 1652 238 246 14 0 chrX 139980854 139980923 -26669373 - L1M4 LINE L1 -1623 4523 4454 7 1652 2133 320 42 25 chrX 139981087 139982055 -26668241 - Lx7 LINE L1 -385 7311 6327 7 1652 279 256 0 24 chrX 139982384 139982468 -26667828 - L1M4 LINE L1 -1987 4159 4078 7 1652 695 315 26 52 chrX 139982499 139982730 -26667566 + Tigger5 DNA MER2_type 30 254 -2152 7 1652 335 200 43 0 chrX 139982847 139982917 -26667379 - MTD LTR MaLR -67 352 280 7 1652 1205 228 24 21 chrX 139982937 139983277 -26667019 - RLTR15 LTR ERVK -18 341 1 7 1652 876 284 49 4 chrX 139983281 139983525 -26666771 - MTD LTR MaLR -164 255 1 7 1652 415 295 20 57 chrX 139983534 139983782 -26666514 - L1M4 LINE L1 -2157 3989 3751 7 1652 520 265 68 109 chrX 139983824 139984337 -26665959 - L1MD LINE L1 -2121 4025 3534 7 206 1492 260 52 3 chrX 139984549 139984935 -26665361 + Lx9 LINE L1 6435 6839 -805 7 1653 568 272 101 37 chrX 139985358 139985686 -26664610 + L1MC4 LINE L1 7550 7898 -144 7 1653 398 256 66 8 chrX 139985694 139985816 -26664480 + Lx6 LINE L1 7278 7406 -54 7 1653 21 36 0 0 chrX 139985828 139985856 -26664440 + AT_rich Low_complexity Low_complexity 1 28 0 8 1653 273 266 21 0 chrX 139985856 139985950 -26664346 + L1MC4 LINE L1 7897 7992 -50 7 1653 364 360 0 0 chrX 139986429 139986543 -26663753 + MIRb SINE MIR 40 153 -115 8 1653 423 0 0 0 chrX 139986670 139986717 -26663579 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 8 1653 254 374 72 0 chrX 139988003 139988169 -26662127 + L2b LINE L2 2582 2759 -660 8 1653 286 177 274 0 chrX 139988172 139988234 -26662062 + Zaphod2 DNA Tip100 4 82 -3442 8 1653 207 316 100 76 chrX 139988741 139988991 -26661305 + L2b LINE L2 2765 3020 -399 8 1653 255 397 0 0 chrX 139989075 139989148 -26661148 + L2b LINE L2 3293 3365 -10 8 1653 378 0 0 0 chrX 139990099 139990141 -26660155 + (TAA)n Simple_repeat Simple_repeat 2 43 0 8 1653 702 274 80 15 chrX 139990193 139990393 -26659903 + ID_B1 SINE B4 1 213 -11 8 1653 459 0 0 0 chrX 139990393 139990444 -26659852 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1653 411 38 0 0 chrX 139990444 139990496 -26659800 + (GA)n Simple_repeat Simple_repeat 2 54 0 8 1653 186 323 15 15 chrX 139990558 139990624 -26659672 - MIR3 SINE MIR -30 178 113 8 1653 444 51 0 0 chrX 139990653 139990712 -26659584 + (TG)n Simple_repeat Simple_repeat 1 59 0 8 1653 215 350 19 19 chrX 139991740 139991845 -26658451 + MIRm SINE MIR 82 186 -90 8 1653 351 0 0 0 chrX 139991963 139992002 -26658294 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 1653 234 314 29 0 chrX 139992086 139992156 -26658140 + ID2 SINE ID 1 72 -11 8 1653 259 327 104 15 chrX 139992241 139992443 -26657853 + MER112 DNA MER1_type 7 226 -35 8 1653 208 162 27 0 chrX 139992443 139992480 -26657816 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 8 1653 1131 262 32 4 chrX 139993116 139993369 -26656927 - B4A SINE B4 -28 264 5 8 1653 392 260 31 0 chrX 139993791 139993887 -26656409 - PB1D10 SINE Alu -9 108 10 8 1653 244 327 62 18 chrX 139994147 139994259 -26656037 - MIRc SINE MIR -149 119 3 8 1653 485 358 94 4 chrX 139994542 139994775 -26655521 + MIRc SINE MIR 2 255 -13 8 1653 183 281 139 9 chrX 139994794 139994909 -26655387 - L2a LINE L2 -10 3416 3287 8 1653 443 18 0 18 chrX 139994975 139995032 -26655264 + (GGGAGA)n Simple_repeat Simple_repeat 3 58 0 8 1653 1247 95 94 5 chrX 139995417 139995618 -26654678 - L1_Mus3 LINE L1 -5 6633 6415 8 1653 2029 64 0 0 chrX 139995618 139995884 -26654412 + L1_Mus3 LINE L1 6112 6377 -189 8 1653 323 346 23 0 chrX 139995886 139996019 -26654277 + MIR SINE MIR 126 261 -1 8 1653 375 23 0 0 chrX 139996344 139996388 -26653908 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1653 198 156 0 0 chrX 139996525 139996570 -26653726 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1653 336 253 42 10 chrX 139996595 139996691 -26653605 - L2a LINE L2 -252 3174 3076 8 1653 207 146 20 20 chrX 139996762 139996811 -26653485 + (TTG)n Simple_repeat Simple_repeat 2 50 0 8 1653 594 378 74 75 chrX 139997409 139998124 -26652172 - L3 LINE CR1 -438 4051 3338 8 1653 513 316 32 45 chrX 139998999 139999307 -26650989 - Lx8 LINE L1 -233 7240 6937 8 1653 287 376 48 82 chrX 140000487 140000871 -26649425 + L2b LINE L2 2797 3156 -270 1 1653 423 296 61 25 chrX 140000921 140001084 -26649212 + MER5B DNA MER1_type 1 169 -9 2 1653 408 329 14 14 chrX 140001162 140001310 -26648986 - L2a LINE L2 0 3426 3279 3 1653 963 310 13 79 chrX 140001395 140001787 -26648509 + MLT1A LTR MaLR 9 374 0 4 1653 293 47 0 23 chrX 140001813 140001857 -26648439 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 5 1653 453 353 122 9 chrX 140001995 140002207 -26648089 - L2a LINE L2 -359 3060 2832 3 1653 1831 212 18 62 chrX 140002207 140002645 -26647651 - MTD LTR MaLR 0 419 1 6 1653 453 353 122 9 chrX 140002645 140002775 -26647521 - L2a LINE L2 -588 2831 2680 3 1653 214 349 127 36 chrX 140003391 140003611 -26646685 - L2a LINE L2 -1292 2127 1888 3 1653 598 251 60 20 chrX 140003619 140003925 -26646371 - ORR1E LTR MaLR -18 361 4 7 1653 643 263 109 9 chrX 140003925 140004134 -26646162 - ORR1E-int LTR MaLR -50 1530 1299 7 1653 4746 224 55 26 chrX 140004134 140004990 -26645306 + Lx7 LINE L1 6396 7293 -403 8 1653 423 0 0 0 chrX 140004990 140005037 -26645259 + (CA)n Simple_repeat Simple_repeat 2 48 0 9 1653 4746 224 55 26 chrX 140005037 140005425 -26644871 + Lx7 LINE L1 7294 7675 -21 8 1653 3656 285 88 72 chrX 140005425 140005754 -26644542 - ORR1E-int LTR MaLR -279 1301 1003 7 1653 1032 209 50 0 chrX 140005754 140005955 -26644341 + B3 SINE B2 1 211 -5 1 1653 3656 283 92 73 chrX 140005955 140006925 -26643371 - ORR1E-int LTR MaLR -578 1002 1 7 1653 1246 255 98 27 chrX 140006927 140007262 -26643034 - ORR1E LTR MaLR 0 359 1 7 1653 958 207 42 14 chrX 140007458 140007674 -26642622 - Lx4A LINE L1 -7 7051 6830 1 1653 823 181 29 24 chrX 140007748 140007918 -26642378 + B2_Mm2 SINE B2 1 171 -24 1 1653 288 243 29 0 chrX 140008882 140008952 -26641344 - MIRb SINE MIR -14 254 183 1 1653 3551 60 2 43 chrX 140009109 140009599 -26640697 + L1_Mus2 LINE L1 6096 6565 -1 1 1653 23 0 0 0 chrX 140009636 140009659 -26640637 + AT_rich Low_complexity Low_complexity 1 23 0 1 1653 228 335 101 15 chrX 140010187 140010381 -26639915 + MIRb SINE MIR 16 236 -32 1 1653 295 318 60 38 chrX 140010396 140010561 -26639735 - MIRb SINE MIR -23 245 74 1 1653 337 320 54 13 chrX 140011606 140011755 -26638541 - MIRb SINE MIR -9 259 105 1 1653 498 33 0 0 chrX 140012168 140012228 -26638068 + (TTA)n Simple_repeat Simple_repeat 1 60 0 1 1653 4018 64 2 4 chrX 140012231 140012746 -26637550 - L1_Mus2 LINE L1 -14 6552 6039 2 1653 2753 39 3 11 chrX 140012746 140013106 -26637190 + L1_Mus2 LINE L1 5689 6045 -521 2 1653 286 324 0 0 chrX 140013496 140013567 -26636729 + MER5A DNA MER1_type 119 189 0 2 1653 214 194 30 0 chrX 140014800 140014867 -26635429 + GA-rich Low_complexity Low_complexity 2 70 0 2 1653 186 43 0 0 chrX 140015111 140015134 -26635162 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 1653 538 45 22 22 chrX 140016562 140016652 -26633644 - L1Md_F2 LINE L1 0 6582 6493 2 1653 1330 175 71 11 chrX 140016761 140017027 -26633269 + L1M2 LINE L1 5486 5767 -533 2 1653 405 0 0 0 chrX 140017038 140017083 -26633213 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1653 392 139 13 0 chrX 140017089 140017168 -26633128 + GA-rich Low_complexity Low_complexity 2 81 0 2 1653 1528 279 22 3 chrX 140017172 140017532 -26632764 + ORR1D2 LTR MaLR 1 367 -3 2 1653 387 265 105 33 chrX 140017707 140018016 -26632280 + L1MC4 LINE L1 7727 8042 0 2 1653 248 340 0 76 chrX 140018224 140018342 -26631954 - ID4 SINE ID -42 110 2 3 1653 230 373 0 13 chrX 140018342 140018418 -26631878 - MER5A1 DNA MER1_type -91 75 1 3 1653 419 343 40 23 chrX 140019141 140019314 -26630982 + MIRb SINE MIR 42 217 -51 3 1653 303 315 86 8 chrX 140019826 140019954 -26630342 + MIRb SINE MIR 55 192 -76 3 1653 278 304 0 0 chrX 140020252 140020344 -26629952 - L1MB5 LINE L1 -10 6164 6073 3 1653 1890 213 57 20 chrX 140020344 140020746 -26629550 - MTD LTR MaLR -2 417 1 3 1653 792 87 0 0 chrX 140020918 140021045 -26629251 + (CA)n Simple_repeat Simple_repeat 2 128 0 3 1653 330 341 45 45 chrX 140021443 140021621 -26628675 - MIRb SINE MIR -2 266 89 3 1653 270 273 28 117 chrX 140021621 140021766 -26628530 - RLTR25B LTR ERVK -456 572 441 3 1653 597 205 0 6 chrX 140021654 140021777 -26628519 - B1_Mur1 SINE Alu -2 147 29 3 1653 280 301 91 24 chrX 140021882 140022067 -26628229 + MIRc SINE MIR 47 248 -20 4 1653 234 274 11 45 chrX 140022383 140022471 -26627825 + MIR SINE MIR 139 223 -39 4 1653 633 296 32 72 chrX 140023479 140023730 -26626566 + B4A SINE B4 1 241 -51 4 1653 252 342 27 0 chrX 140023874 140023947 -26626349 + B4A SINE B4 218 292 0 4 1653 15151 129 246 15 chrX 140025351 140030268 -26620028 + L1_Mus3 LINE L1 536 6630 -8 4 1653 317 317 117 0 chrX 140030308 140030453 -26619843 - L1MEc LINE L1 -4519 1881 1720 4 1653 500 287 62 86 chrX 140030490 140030727 -26619569 - L1MEc LINE L1 -4883 1517 1280 4 1653 916 123 85 12 chrX 140030727 140030892 -26619404 - B2_Mm2 SINE B2 -18 177 1 4 1653 500 287 62 86 chrX 140030892 140030990 -26619306 - L1MEc LINE L1 -5121 1279 1190 4 1653 338 254 0 33 chrX 140030998 140031120 -26619176 - L1M3 LINE L1 -832 5308 5191 4 1653 390 91 0 0 chrX 140031691 140031746 -26618550 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 1653 848 287 61 4 chrX 140032221 140032745 -26617551 + L1M4 LINE L1 2900 3453 -2693 4 1653 1048 209 29 60 chrX 140032784 140033123 -26617173 + BGLII_B LTR ERVK 60 441 0 4 1653 571 275 116 16 chrX 140033470 140033773 -26616523 + L1M4 LINE L1 3541 3873 -2267 4 1653 269 105 798 47 chrX 140033799 140033883 -26616413 + MTC LTR MaLR 62 208 -213 5 1653 33272 85 5 1 chrX 140033887 140039308 -26610988 + L1Md_A LINE L1 446 5826 -57 5 1653 576 0 0 0 chrX 140040254 140040318 -26609978 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 1653 215 319 56 0 chrX 140040346 140040418 -26609878 + PB1D10 SINE Alu 2 77 -40 5 1653 457 305 228 17 chrX 140040476 140040713 -26609583 + Charlie4 DNA MER1_type 15 301 -1660 5 1653 241 246 130 43 chrX 140040720 140040835 -26609461 + Charlie4 DNA MER1_type 1770 1894 -67 5 1653 386 328 23 30 chrX 140040842 140040974 -26609322 + RSINE1 SINE B4 12 142 -23 5 1653 237 65 0 0 chrX 140041068 140041099 -26609197 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 5 1653 233 217 100 0 chrX 140042226 140042286 -26608010 + Charlie4a DNA MER1_type 37 102 -406 5 1653 591 275 7 21 chrX 140042402 140042547 -26607749 + B1_Mur1 SINE Alu 7 149 0 5 1653 384 40 0 0 chrX 140043451 140043501 -26606795 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1653 302 329 63 35 chrX 140043504 140043587 -26606709 - RSINE1 SINE B4 -17 148 68 6 1653 390 42 0 0 chrX 140043587 140043635 -26606661 + (ATG)n Simple_repeat Simple_repeat 2 49 0 6 1653 302 329 63 35 chrX 140043635 140043693 -26606603 - RSINE1 SINE B4 -98 67 4 6 1653 444 298 57 21 chrX 140043703 140043895 -26606401 - MLT1F2 LTR MaLR -11 549 351 6 1653 3890 208 117 33 chrX 140043928 140044990 -26605306 - Lx7 LINE L1 -92 7604 6454 6 1653 358 167 0 0 chrX 140044998 140045064 -26605232 - L1_Mur3 LINE L1 -1049 4831 4766 6 1653 3061 156 39 9 chrX 140045056 140045692 -26604604 - L1_Mur3 LINE L1 -2006 3874 3220 6 1653 405 0 0 0 chrX 140045783 140045828 -26604468 + (TTA)n Simple_repeat Simple_repeat 2 46 0 6 1653 314 333 165 25 chrX 140045855 140046098 -26604198 - MLT1F2 LTR MaLR -280 280 4 6 1653 324 333 78 27 chrX 140046328 140046555 -26603741 + MIRb SINE MIR 26 262 0 6 1653 461 102 11 0 chrX 140046852 140046863 -26603433 + (GA)n Simple_repeat Simple_repeat 2 13 0 6 1653 189 0 0 0 chrX 140046863 140046884 -26603412 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 1653 461 102 11 0 chrX 140046884 140046960 -26603336 + (GA)n Simple_repeat Simple_repeat 2 77 0 6 1653 5826 60 0 25 chrX 140047347 140048131 -26602165 - L1Md_F2 LINE L1 0 6582 5819 7 1653 244 358 73 23 chrX 140048145 140048244 -26602052 + MIRc SINE MIR 17 126 -142 7 1653 1506 241 38 50 chrX 140048244 140048668 -26601628 - MTD LTR MaLR 0 419 1 7 1653 244 358 73 23 chrX 140048668 140048745 -26601551 + MIRc SINE MIR 127 202 -66 7 1653 243 374 106 24 chrX 140049209 140049379 -26600917 - MIRb SINE MIR -34 234 51 7 1653 220 225 0 101 chrX 140050917 140050996 -26599300 + L3 LINE CR1 4213 4283 -206 7 1653 608 346 35 4 chrX 140051005 140051234 -26599062 + MIR SINE MIR 5 240 -22 7 1653 264 347 98 53 chrX 140052478 140052703 -26597593 + MIRb SINE MIR 25 259 -9 7 1653 24 32 0 0 chrX 140052756 140052787 -26597509 + AT_rich Low_complexity Low_complexity 1 31 0 7 1653 843 10 0 0 chrX 140054408 140054511 -26595785 - L1_Mm LINE L1 -436 5447 5345 7 1653 343 333 0 28 chrX 140054679 140054787 -26595509 - MER45R DNA Tip100 -1475 106 2 7 1653 803 55 0 9 chrX 140055072 140055182 -26595114 + (TTTC)n Simple_repeat Simple_repeat 3 111 0 8 1653 306 176 33 11 chrX 140055352 140055444 -26594852 + L1MA5 LINE L1 6202 6295 -5 8 1653 525 128 0 0 chrX 140055741 140055843 -26594453 + (GA)n Simple_repeat Simple_repeat 1 102 0 8 1653 302 45 23 0 chrX 140056563 140056607 -26593689 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1653 491 326 48 45 chrX 140056652 140056941 -26593355 - B4A SINE B4 0 292 3 8 1653 486 0 0 0 chrX 140057832 140057886 -26592410 + (TA)n Simple_repeat Simple_repeat 2 55 0 8 1653 214 348 71 30 chrX 140059371 140059540 -26590756 - L2c LINE L2 -20 3367 3192 8 1653 180 331 78 24 chrX 140060342 140060509 -26589787 + L2a LINE L2 1878 2053 -1366 8 1653 21 0 0 0 chrX 140060730 140060751 -26589545 + AT_rich Low_complexity Low_complexity 1 21 0 8 1653 253 364 69 46 chrX 140060778 140061040 -26589256 + L2a LINE L2 2765 3032 -387 8 1653 282 289 154 0 chrX 140061244 140061348 -26588948 + L2a LINE L2 3302 3421 -5 8 1653 247 289 29 49 chrX 140063046 140063148 -26587148 + L2a LINE L2 3321 3420 -6 8 1653 360 0 0 0 chrX 140063522 140063562 -26586734 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 1653 215 217 0 0 chrX 140063672 140063718 -26586578 + (CATG)n Simple_repeat Simple_repeat 1 46 0 9 1653 323 360 0 0 chrX 140063723 140063823 -26586473 - ID_B1 SINE B4 0 224 125 9 1653 382 316 13 97 chrX 140064435 140064676 -26585620 - MIRb SINE MIR 0 268 45 9 1653 238 0 0 0 chrX 140065050 140065080 -26585216 + B3A SINE B2 3 32 -166 9 1653 322 154 185 0 chrX 140065078 140065143 -26585153 + B2_Mm2 SINE B2 85 161 -34 9 1653 276 30 0 0 chrX 140065143 140065176 -26585120 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 9 1653 1301 66 0 0 chrX 140066833 140067000 -26583296 - L1_Mus2 LINE L1 -2 6564 6398 9 1653 1987 207 60 4 chrX 140067302 140067700 -26582596 + MTD LTR MaLR 1 405 -14 9 1653 1022 40 0 0 chrX 140067834 140067960 -26582336 - B1_Mus2 SINE Alu -10 137 12 9 1653 446 202 45 0 chrX 140068284 140068373 -26581923 - MTEa LTR MaLR 0 379 287 1 1653 1179 276 32 32 chrX 140068603 140068887 -26581409 - MTEa LTR MaLR -90 289 6 1 1653 395 36 36 0 chrX 140070108 140070164 -26580132 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 1 1653 281 273 0 0 chrX 140070164 140070252 -26580044 + (CATATA)n Simple_repeat Simple_repeat 1 88 0 1 1653 378 0 0 0 chrX 140071124 140071166 -26579130 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 1 1653 321 289 0 0 chrX 140071219 140071295 -26579001 - ID4_ SINE ID -3 80 5 1 1653 395 300 0 52 chrX 140071619 140071735 -26578561 - PB1D10 SINE Alu 0 117 8 1 1653 389 315 37 38 chrX 140072029 140072359 -26577937 - L1MB7 LINE L1 -270 5894 5567 1 1653 645 289 7 0 chrX 140072389 140072524 -26577772 + RSINE1 SINE B4 11 146 -19 1 1653 255 250 102 74 chrX 140072790 140073075 -26577221 - L1MB7 LINE L1 -743 5403 5111 1 1653 893 275 167 34 chrX 140073077 140073939 -26576357 - L1MB7 LINE L1 -1540 4606 3630 1 1653 470 348 0 29 chrX 140073941 140074080 -26576216 + ID_B1 SINE B4 87 221 -3 1 1653 321 171 105 0 chrX 140074154 140074230 -26576066 - L1M4 LINE L1 -2636 3510 3427 1 1653 300 313 76 29 chrX 140074454 140074730 -26575566 - L1M5 LINE L1 -1339 4807 4519 1 1653 23 0 0 0 chrX 140074966 140074989 -26575307 + AT_rich Low_complexity Low_complexity 1 23 0 1 1653 193 347 26 78 chrX 140076750 140076941 -26573355 - MIRb SINE MIR 0 268 88 1 1653 308 314 127 40 chrX 140077003 140077255 -26573041 - L1M5 LINE L1 -1797 4349 4076 1 1653 446 314 72 42 chrX 140077285 140077521 -26572775 - MIRb SINE MIR -1 267 25 1 1653 362 359 47 33 chrX 140077557 140077587 -26572709 - L1M5 LINE L1 -2154 3992 3959 1 1653 188 0 74 0 chrX 140077587 140077614 -26572682 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1653 362 359 47 33 chrX 140077614 140077796 -26572500 - L1M5 LINE L1 -2188 3958 3777 1 1653 407 319 16 16 chrX 140078136 140078378 -26571918 - L1M5 LINE L1 -2966 3180 2939 1 1653 300 175 0 0 chrX 140078948 140079011 -26571285 + T-rich Low_complexity Low_complexity 1 63 0 1 1653 276 111 0 0 chrX 140079181 140079226 -26571070 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1653 571 269 150 0 chrX 140080288 140080448 -26569848 + B3A SINE B2 2 185 -13 1 1653 279 0 0 0 chrX 140080460 140080491 -26569805 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 1653 369 0 0 0 chrX 140080491 140080531 -26569765 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1653 203 283 0 0 chrX 140080589 140080642 -26569654 - MIRc SINE MIR -102 166 114 1 1653 634 335 86 68 chrX 140081464 140081976 -26568320 - MT2A LTR ERVL -12 521 1 1 1653 351 299 0 0 chrX 140082050 140082147 -26568149 + MIRc SINE MIR 74 170 -98 1 1653 4173 127 27 9 chrX 140082305 140082973 -26567323 - Lx3C LINE L1 -5 6971 6292 1 1653 2836 105 18 4 chrX 140082977 140083428 -26566868 + Lx3B LINE L1 5831 6287 -686 1 1653 309 231 87 54 chrX 140084023 140084265 -26566031 + L1M2 LINE L1 2936 3185 -2955 1 1653 34 0 0 0 chrX 140084267 140084301 -26565995 + AT_rich Low_complexity Low_complexity 1 34 0 1 1653 236 77 26 0 chrX 140084331 140084370 -26565926 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1653 317 26 0 0 chrX 140084476 140084515 -26565781 + ORR1C2 LTR MaLR 346 384 0 1 1653 820 274 71 49 chrX 140084520 140084888 -26565408 + L1M2 LINE L1 4951 5326 -817 1 1653 2836 284 60 32 chrX 140084868 140085897 -26564399 - Lx8 LINE L1 -194 7279 6222 1 1653 302 277 39 19 chrX 140085949 140086052 -26564244 - PB1D10 SINE Alu -12 105 1 1 1653 247 25 24 24 chrX 140086563 140086604 -26563692 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1653 329 247 12 0 chrX 140087524 140087609 -26562687 - PB1D10 SINE Alu 0 117 32 1 1653 393 22 0 0 chrX 140088005 140088051 -26562245 + (GA)n Simple_repeat Simple_repeat 2 47 0 1 1653 1172 234 89 13 chrX 140088778 140089150 -26561146 - Lx9 LINE L1 -1 7643 7244 1 1653 632 278 103 65 chrX 140089640 140089991 -26560305 - MamRep434 DNA TcMar -2 424 61 1 1653 373 242 73 96 chrX 140090774 140090952 -26559344 + MER5B DNA MER1_type 2 175 -3 1 1653 273 348 120 18 chrX 140090972 140091139 -26559157 - MIR SINE MIR -56 206 23 1 1653 330 288 46 46 chrX 140091467 140091620 -26558676 - LTR65 LTR ERV1 -499 170 18 1 1653 339 315 99 0 chrX 140091810 140091972 -26558324 + L1MD3 LINE L1 7798 7975 -20 1 1653 566 289 106 5 chrX 140092027 140092225 -26558071 + ID_B1 SINE B4 1 218 -6 1 1653 200 217 0 0 chrX 140093542 140093588 -26556708 + T-rich Low_complexity Low_complexity 1 46 0 1 1653 218 173 40 13 chrX 140093601 140093677 -26556619 + CT-rich Low_complexity Low_complexity 1 78 0 1 1653 204 190 66 49 chrX 140094246 140094307 -26555989 + L3 LINE CR1 1627 1688 -2801 1 1653 1008 176 32 16 chrX 140094678 140094868 -26555428 + B3 SINE B2 23 215 -1 1 1653 572 298 14 0 chrX 140095240 140095381 -26554915 + ID_B1 SINE B4 78 220 -4 1 1653 411 309 128 115 chrX 140095487 140095721 -26554575 - Tigger5 DNA MER2_type -2168 238 2 1 1653 317 333 26 9 chrX 140096021 140096136 -26554160 - L1MC LINE L1 -2180 5702 5586 1 1653 372 133 0 0 chrX 140096414 140096474 -26553822 + (A)n Simple_repeat Simple_repeat 1 60 0 1 1653 180 0 0 0 chrX 140096805 140096825 -26553471 + (TTAG)n Simple_repeat Simple_repeat 3 22 0 1 1653 207 222 18 18 chrX 140098720 140098775 -26551521 + CT-rich Low_complexity Low_complexity 6 60 0 1 1653 306 148 0 0 chrX 140101410 140101464 -26548832 + (GAAA)n Simple_repeat Simple_repeat 3 56 0 1 1653 483 18 0 0 chrX 140105137 140105193 -26545103 + (GA)n Simple_repeat Simple_repeat 2 57 0 1 1653 339 256 67 137 chrX 140105619 140105977 -26544319 + RMER17A LTR ERVK 77 409 -342 1 1653 279 0 0 0 chrX 140105977 140106008 -26544288 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1653 409 306 161 9 chrX 140111097 140111308 -26538988 + MIRb SINE MIR 26 268 0 1 1653 1147 75 0 0 chrX 140111870 140112016 -26538280 + B1_Mus2 SINE Alu 2 147 0 1 1653 272 284 15 0 chrX 140112041 140112108 -26538188 + ID4 SINE ID 1 68 -15 1 1653 393 359 48 43 chrX 140112150 140112380 -26537916 + MIRb SINE MIR 35 265 -3 1 1653 303 28 0 0 chrX 140114723 140114759 -26535537 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 1 1653 1146 74 0 0 chrX 140114759 140114907 -26535389 - B1_Mus1 SINE Alu 0 148 1 1 1654 2957 44 0 0 chrX 140116188 140116551 -26533745 - L1_Mus2 LINE L1 -495 6071 5709 1 1654 3452 74 25 0 chrX 140116551 140116999 -26533297 + L1_Mus2 LINE L1 6108 6566 0 1 1654 246 95 0 0 chrX 140117365 140117407 -26532889 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 1 1654 1083 90 7 0 chrX 140117426 140117571 -26532725 - B1_Mus2 SINE Alu -1 146 1 1 1654 309 262 108 36 chrX 140117616 140117727 -26532569 - PB1D7 SINE Alu -1 119 1 1 1654 562 252 26 0 chrX 140117982 140118097 -26532199 - B3 SINE B2 -96 120 3 1 1654 22 35 0 0 chrX 140118103 140118132 -26532164 + AT_rich Low_complexity Low_complexity 1 29 0 1 1654 216 0 0 0 chrX 140119155 140119179 -26531117 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1654 360 0 0 0 chrX 140120052 140120092 -26530204 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 1654 225 0 0 0 chrX 140120092 140120116 -26530180 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 1654 330 80 0 0 chrX 140121402 140121452 -26528844 + (CTAGT)n Simple_repeat Simple_repeat 4 53 0 1 1654 1955 56 0 4 chrX 140122151 140122401 -26527895 - L1_Mus1 LINE L1 0 6567 6319 1 1654 515 120 9 0 chrX 140123637 140123745 -26526551 + (TCTA)n Simple_repeat Simple_repeat 4 112 0 1 1654 6765 86 65 1 chrX 140124267 140125445 -26524851 - L1_Mus3 LINE L1 -6 6632 5379 1 1654 376 263 0 74 chrX 140125727 140125875 -26524421 - Lx5 LINE L1 -1 7049 6913 1 1654 210 37 0 0 chrX 140126343 140126370 -26523926 + (TCCC)n Simple_repeat Simple_repeat 2 28 0 1 1654 1101 94 0 0 chrX 140126370 140126529 -26523767 + (TTTC)n Simple_repeat Simple_repeat 2 161 0 1 1654 725 216 8 0 chrX 140126531 140126665 -26523631 - B1_Mur4 SINE Alu -14 136 2 1 1654 237 132 0 0 chrX 140130116 140130154 -26520142 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 1654 22 0 0 0 chrX 140131012 140131034 -26519262 + AT_rich Low_complexity Low_complexity 1 22 0 1 1654 376 296 70 43 chrX 140131512 140131840 -26518456 - L1ME4a LINE L1 -75 6049 5713 1 1654 263 291 54 93 chrX 140132199 140132457 -26517839 + L4 LINE RTE 1780 2027 -2 1 1654 1983 111 88 0 chrX 140134125 140134422 -26515874 + Lx4A LINE L1 6735 7057 -1 1 1654 183 267 0 0 chrX 140134589 140134664 -26515632 + (CA)n Simple_repeat Simple_repeat 1 75 0 1 1654 341 97 14 18 chrX 140135627 140135691 -26514605 + B3 SINE B2 21 83 -133 1 1654 3266 52 12 7 chrX 140135857 140136279 -26514017 + L1Md_F3 LINE L1 6160 6583 -1 1 1654 537 99 0 0 chrX 140136327 140136408 -26513888 + (GA)n Simple_repeat Simple_repeat 2 82 0 1 1654 1157 74 0 0 chrX 140137345 140137493 -26512803 + B1_Mus1 SINE Alu 1 148 0 1 1654 224 324 89 113 chrX 140138084 140138509 -26511787 - L2c LINE L2 -46 3341 2927 1 1654 29 0 0 0 chrX 140139798 140139827 -26510469 + AT_rich Low_complexity Low_complexity 1 29 0 1 1654 898 75 0 15 chrX 140139921 140140056 -26510240 + L1Md_F2 LINE L1 6438 6570 -12 1 1654 856 208 72 17 chrX 140142217 140142452 -26507844 - Lx7 LINE L1 0 7696 7449 1 1654 319 338 7 37 chrX 140142943 140143078 -26507218 + Charlie4z DNA MER1_type 3 133 -34 1 1654 862 122 30 60 chrX 140143614 140143780 -26506516 + B2_Mm2 SINE B2 34 194 -1 1 1654 708 12 0 0 chrX 140143966 140144047 -26506249 + (TATATG)n Simple_repeat Simple_repeat 2 82 0 1 1654 189 171 0 0 chrX 140148958 140148993 -26501303 + GA-rich Low_complexity Low_complexity 4 38 0 1 1654 216 0 0 0 chrX 140149254 140149278 -26501018 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 1 1654 23 92 0 0 chrX 140150830 140150895 -26499401 + AT_rich Low_complexity Low_complexity 1 65 0 1 1654 846 179 14 20 chrX 140150991 140151139 -26499157 + B1_Mur3 SINE Alu 3 149 0 1 1654 248 190 35 12 chrX 140151142 140151227 -26499069 + (TA)n Simple_repeat Simple_repeat 1 87 0 1 1654 4832 181 33 7 chrX 140151858 140152714 -26497582 - Lx5 LINE L1 -4 7046 6169 2 1654 1662 52 0 5 chrX 140152826 140153037 -26497259 - L1_Mus1 LINE L1 -1 6566 6357 2 1654 479 96 27 14 chrX 140153037 140153111 -26497185 + L1_Mus1 LINE L1 6295 6369 -198 2 1654 866 190 0 0 chrX 140153155 140153297 -26496999 + B3 SINE B2 7 148 -68 2 1654 244 238 0 16 chrX 140153708 140153772 -26496524 + B3 SINE B2 154 216 0 2 1654 194 353 0 34 chrX 140153937 140154025 -26496271 - MIRc SINE MIR -96 172 88 2 1654 206 259 207 14 chrX 140154000 140154145 -26496151 - MIR SINE MIR -65 197 25 2 1654 981 308 83 19 chrX 140154414 140154983 -26495313 + L1MB2 LINE L1 5565 6169 -2 2 1654 298 254 14 0 chrX 140154994 140155065 -26495231 + ID4_ SINE ID 2 73 -10 2 1654 198 103 0 0 chrX 140155088 140155117 -26495179 + (CATG)n Simple_repeat Simple_repeat 1 29 0 2 1654 261 319 67 34 chrX 140155243 140155392 -26494904 + MIRc SINE MIR 115 268 0 2 1654 226 302 102 20 chrX 140155703 140155801 -26494495 - RMER1C Other Other -14 1328 1223 2 1654 1888 263 40 33 chrX 140155717 140156298 -26493998 - Lx8 LINE L1 -6 7467 6883 2 1654 266 387 69 46 chrX 140156901 140157291 -26493005 - L2 LINE L2 -385 3034 2636 2 1654 3723 219 20 1 chrX 140158083 140158798 -26491498 - Lx7 LINE L1 -779 6917 6190 2 1654 8208 46 0 0 chrX 140158796 140159933 -26490363 - L1Md_F2 LINE L1 0 6582 5446 2 1654 1633 200 62 32 chrX 140159933 140160082 -26490214 - Lx7 LINE L1 -1496 6200 6031 2 1654 219 69 0 0 chrX 140160082 140160111 -26490185 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1654 1633 200 62 32 chrX 140160111 140160395 -26489901 - Lx7 LINE L1 -1666 6030 5754 2 1654 371 56 19 0 chrX 140160410 140160464 -26489832 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 1654 432 0 0 0 chrX 140160464 140160511 -26489785 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 1654 229 279 93 37 chrX 140160512 140160620 -26489676 - B4 SINE B4 -16 276 163 2 1654 1149 237 4 0 chrX 140160625 140160853 -26489443 + Lx7 LINE L1 6570 6798 -898 2 1654 545 301 7 27 chrX 140160855 140161002 -26489294 - B4 SINE B4 -148 144 1 2 1654 565 234 60 68 chrX 140161137 140161389 -26488907 + Lx9 LINE L1 5762 6011 -1633 2 1654 287 254 51 0 chrX 140161956 140162074 -26488222 - Charlie5 DNA MER1_type -1 2623 2500 2 1654 510 279 117 22 chrX 140162095 140162271 -26488025 + Lx8 LINE L1 7137 7342 -131 2 1654 432 0 0 0 chrX 140162271 140162319 -26487977 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 1654 510 277 127 25 chrX 140162319 140162408 -26487888 + Lx8 LINE L1 7343 7438 -35 2 1654 8640 104 25 30 chrX 140162413 140164055 -26486241 - Lx4A LINE L1 -654 6404 4734 2 1654 387 0 0 0 chrX 140164055 140164098 -26486198 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2 1654 8640 104 13 34 chrX 140164098 140164301 -26485995 - Lx4A LINE L1 -1144 4733 4559 2 1654 1879 130 17 3 chrX 140164301 140164594 -26485702 + Lx4A LINE L1 6762 7058 0 2 1654 535 307 95 41 chrX 140165180 140165401 -26484895 + B4A SINE B4 14 246 -46 2 1654 2041 236 86 18 chrX 140165402 140165414 -26484882 - RMER15 LTR ERVL 0 575 564 2 1654 3537 79 2 2 chrX 140165414 140165885 -26484411 + L1_Mus1 LINE L1 6096 6566 -1 2 1654 2041 236 86 18 chrX 140165885 140166386 -26483910 - RMER15 LTR ERVL -12 563 28 2 1654 233 176 39 0 chrX 140166463 140166514 -26483782 + B4A SINE B4 230 282 -10 2 1654 276 254 50 83 chrX 140166616 140166736 -26483560 - Charlie5 DNA MER1_type -157 2467 2352 2 1654 573 283 69 0 chrX 140166803 140166962 -26483334 - MER5A DNA MER1_type -16 173 4 2 1654 219 114 0 0 chrX 140167659 140167694 -26482602 + (GAA)n Simple_repeat Simple_repeat 1 35 0 2 1654 238 176 40 26 chrX 140167797 140167873 -26482423 + (TA)n Simple_repeat Simple_repeat 2 78 0 2 1654 1185 143 113 0 chrX 140167896 140168099 -26482197 + URR1A DNA MER1_type 1 226 0 2 1654 192 125 0 0 chrX 140168222 140168254 -26482042 + (TA)n Simple_repeat Simple_repeat 1 32 0 2 1654 381 43 0 0 chrX 140168277 140168324 -26481972 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 2 1654 219 368 40 0 chrX 140168505 140168581 -26481715 + B4A SINE B4 89 167 -125 2 1654 451 280 0 0 chrX 140168514 140168614 -26481682 + PB1D10 SINE Alu 13 112 -5 2 1654 734 332 111 8 chrX 140168646 140168907 -26481389 + B4A SINE B4 3 290 -2 2 1654 523 289 37 7 chrX 140169057 140169193 -26481103 + B3 SINE B2 1 140 -76 2 1654 372 77 0 0 chrX 140169212 140169264 -26481032 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1654 276 255 121 10 chrX 140170777 140170876 -26479420 + MER20 DNA MER1_type 54 163 -56 2 1654 339 345 97 11 chrX 140171157 140171333 -26478963 - MIRb SINE MIR -55 213 23 2 1654 206 281 31 15 chrX 140172053 140172118 -26478178 + MIRc SINE MIR 97 162 -100 2 1654 249 303 108 50 chrX 140172151 140172290 -26478006 + MIRb SINE MIR 20 166 -96 2 1654 194 315 157 0 chrX 140172343 140172432 -26477864 + MIRb SINE MIR 26 128 -140 2 1654 222 91 0 0 chrX 140173261 140173294 -26477002 + (ATG)n Simple_repeat Simple_repeat 2 34 0 2 1654 580 195 85 8 chrX 140173312 140173441 -26476855 + B1_Mus2 SINE Alu 9 147 0 2 1654 232 48 48 0 chrX 140173451 140173493 -26476803 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 2 1654 402 269 70 35 chrX 140174086 140174286 -26476010 + MamRep434 DNA TcMar 4 210 -216 2 1654 293 404 75 45 chrX 140174528 140174860 -26475436 - L2b LINE L2 -5 3370 3029 2 1654 559 324 7 7 chrX 140174891 140175040 -26475256 + B3A SINE B2 7 155 -43 2 1654 441 0 0 0 chrX 140175104 140175153 -26475143 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1654 636 288 19 6 chrX 140175924 140176085 -26474211 + ID_B1 SINE B4 2 164 -60 2 1654 421 337 49 28 chrX 140177169 140177453 -26472843 - B4A SINE B4 -2 290 1 2 1654 234 250 0 62 chrX 140177463 140177527 -26472769 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 2 1654 775 320 63 0 chrX 140177566 140177835 -26472461 + B4A SINE B4 1 286 -6 2 1654 272 241 0 25 chrX 140177879 140177960 -26472336 + L1MB8 LINE L1 6091 6169 -9 2 1654 378 0 0 0 chrX 140178436 140178478 -26471818 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 1654 285 266 113 31 chrX 140179058 140179155 -26471141 + MER5A DNA MER1_type 54 158 -31 2 1654 423 220 2 7 chrX 140179842 140179940 -26470356 + URR1B DNA MER1_type 1 96 -129 2 1654 361 313 20 10 chrX 140179980 140180080 -26470216 + RSINE1 SINE B4 4 104 -61 2 1654 450 0 0 0 chrX 140180094 140180144 -26470152 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1654 33 0 0 0 chrX 140180163 140180196 -26470100 + AT_rich Low_complexity Low_complexity 1 33 0 2 1654 229 293 156 26 chrX 140180227 140180381 -26469915 - L1MA6 LINE L1 -132 6168 5995 2 1654 443 250 0 59 chrX 140180381 140180517 -26469779 - L1MA6 LINE L1 -763 5534 5407 2 1654 381 43 0 0 chrX 140180575 140180622 -26469674 + (TTA)n Simple_repeat Simple_repeat 2 48 0 2 1654 378 267 181 0 chrX 140181180 140181296 -26469000 + ID_B1 SINE B4 85 221 -3 2 1654 28 48 0 0 chrX 140182010 140182052 -26468244 + AT_rich Low_complexity Low_complexity 1 42 0 2 1654 221 255 0 19 chrX 140182661 140182713 -26467583 + GA-rich Low_complexity Low_complexity 5 55 0 2 1654 480 198 135 0 chrX 140183200 140183311 -26466985 + B1_Mus1 SINE Alu 13 138 -10 2 1654 3718 70 10 0 chrX 140183496 140183989 -26466307 - Lx8 LINE L1 -1559 5914 5420 2 1654 981 0 8 38 chrX 140183989 140184122 -26466174 + L1Md_F2 LINE L1 6440 6568 -14 2 1654 881 19 0 9 chrX 140184140 140184248 -26466048 + (GAAA)n Simple_repeat Simple_repeat 2 108 0 2 1654 298 219 50 50 chrX 140185115 140185216 -26465080 - MTEb LTR MaLR 0 379 279 2 1654 1180 55 0 0 chrX 140185274 140185420 -26464876 + B1_Mm SINE Alu 2 147 0 2 1654 10211 21 0 0 chrX 140185593 140187459 -26462837 - L1Md_T LINE L1 0 6582 4717 2 1654 10968 26 11 1 chrX 140187455 140188775 -26461521 + L1Md_T LINE L1 3376 4709 -1174 2 1654 22 0 0 0 chrX 140189140 140189162 -26461134 + AT_rich Low_complexity Low_complexity 1 22 0 2 1654 441 322 106 25 chrX 140189290 140189564 -26460732 - Kanga2_a DNA Tc2 -229 659 364 2 1654 267 195 157 12 chrX 140189938 140190021 -26460275 - L1MC5 LINE L1 -595 7366 7272 2 1654 490 291 117 55 chrX 140190134 140190497 -26459799 - L1MC5 LINE L1 -792 7250 6864 2 1654 442 323 142 4 chrX 140190501 140190762 -26459534 - Kanga2_a DNA Tc2 -531 357 61 2 1654 237 290 88 31 chrX 140190920 140191080 -26459216 - L1MC LINE L1 -2121 5761 5593 2 1654 595 354 45 42 chrX 140192211 140192497 -26457799 - MamSINE1 SINE tRNA 0 290 4 2 1654 183 42 0 0 chrX 140192741 140192765 -26457531 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 1654 415 265 34 0 chrX 140193318 140193435 -26456861 + L1MA4A LINE L1 5809 5929 -374 2 1654 450 116 0 11 chrX 140193504 140193591 -26456705 - Lx4A LINE L1 -1 7057 6972 2 1654 182 360 57 23 chrX 140193878 140193966 -26456330 + MIR3 SINE MIR 64 154 -54 2 1654 201 108 0 0 chrX 140194203 140194240 -26456056 + (C)n Simple_repeat Simple_repeat 1 37 0 2 1654 194 312 85 39 chrX 140194723 140194853 -26455443 + MIR3 SINE MIR 64 199 -9 2 1654 21 36 0 0 chrX 140195563 140195591 -26454705 + AT_rich Low_complexity Low_complexity 1 28 0 2 1654 207 250 13 89 chrX 140195697 140195776 -26454520 - MIR SINE MIR 0 262 190 2 1654 867 98 28 34 chrX 140195934 140195947 -26454349 + polypurine Low_complexity Low_complexity 3 15 0 2 1654 1379 6 0 43 chrX 140195947 140196135 -26454161 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 2 1654 867 98 28 34 chrX 140196135 140196300 -26453996 + GA-rich Low_complexity Low_complexity 16 179 0 2 1654 182 108 46 87 chrX 140197789 140197848 -26452448 - L2a LINE L2 0 3426 3327 2 1654 357 386 7 13 chrX 140198012 140198167 -26452129 + MIRb SINE MIR 97 250 -18 2 1654 211 324 42 0 chrX 140198209 140198280 -26452016 - MIRc SINE MIR -140 128 55 2 1654 369 244 34 34 chrX 140198418 140198507 -26451789 + PB1D10 SINE Alu 9 97 -20 2 1654 189 0 0 0 chrX 140198525 140198546 -26451750 + (CAGA)n Simple_repeat Simple_repeat 4 24 0 2 1654 252 189 19 0 chrX 140199301 140199354 -26450942 + L1MB1 LINE L1 6102 6155 -34 2 1654 359 331 36 14 chrX 140200892 140200911 -26449385 - ID_B1 SINE B4 -3 221 82 2 1654 407 293 34 17 chrX 140200911 140201029 -26449267 - B1F1 SINE Alu -29 120 1 2 1654 261 0 0 0 chrX 140201295 140201324 -26448972 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 3 1654 557 325 0 6 chrX 140201892 140202056 -26448240 - RSINE1 SINE B4 0 165 3 3 1654 30642 70 5 6 chrX 140202386 140207175 -26443121 - L1Md_F2 LINE L1 -16 6566 1783 3 1654 3329 200 37 11 chrX 140207171 140207909 -26442387 - L1Md_F2 LINE L1 -5600 1124 368 3 1654 231 103 0 0 chrX 140208089 140208128 -26442168 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 1654 2151 98 48 12 chrX 140208132 140208463 -26441833 - L1_Mus4 LINE L1 -16 6620 6278 3 1654 180 0 0 0 chrX 140208596 140208616 -26441680 + (CAGAG)n Simple_repeat Simple_repeat 2 21 0 3 1654 2955 69 10 27 chrX 140210693 140211107 -26439189 - L1_Mus2 LINE L1 -1 6565 6159 3 1654 559 75 0 7 chrX 140211107 140211192 -26439104 + L1_Mus2 LINE L1 6098 6184 -398 3 1654 357 321 70 16 chrX 140212589 140212776 -26437520 + MIRb SINE MIR 43 239 -29 3 1654 279 0 0 0 chrX 140213022 140213053 -26437243 + (TTG)n Simple_repeat Simple_repeat 3 33 0 3 1654 761 322 57 73 chrX 140214217 140214602 -26435694 - MTE2a LTR MaLR 0 379 1 3 1654 1039 174 58 58 chrX 140216041 140216203 -26434093 - URR1A DNA MER1_type 0 226 69 3 1654 1101 71 0 0 chrX 140216203 140216343 -26433953 - B1_Mus1 SINE Alu -7 141 2 3 1654 1039 174 58 58 chrX 140216343 140216406 -26433890 - URR1A DNA MER1_type -158 68 1 3 1654 180 245 0 0 chrX 140218542 140218595 -26431701 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 1654 249 33 0 0 chrX 140218746 140218776 -26431520 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1654 8976 11 0 0 chrX 140218807 140220471 -26429825 - L1Md_T LINE L1 0 6582 4919 3 1654 405 353 25 55 chrX 140220531 140220732 -26429564 + MIR SINE MIR 4 198 -64 3 1654 430 313 0 44 chrX 140220848 140220985 -26429311 + Tigger16a DNA Tigger 787 917 -16 3 1654 197 120 40 0 chrX 140222549 140222599 -26427697 + A-rich Low_complexity Low_complexity 2 53 0 3 1654 1145 234 58 29 chrX 140222695 140223008 -26427288 + MamRep1161 DNA TcMar 2 323 -634 3 1654 225 0 0 0 chrX 140223412 140223437 -26426859 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 1654 228 125 50 0 chrX 140223454 140223494 -26426802 - Lx8 LINE L1 -1584 5889 5848 3 1654 219 288 0 22 chrX 140224680 140224723 -26425573 + polypurine Low_complexity Low_complexity 1 42 0 3 1654 2409 44 3 0 chrX 140224723 140225050 -26425246 + L1Md_F2 LINE L1 6273 6582 0 3 1654 200 329 0 25 chrX 140225020 140225057 -26425239 + polypurine Low_complexity Low_complexity 43 79 0 3 1654 1049 126 123 61 chrX 140225511 140225723 -26424573 + URR1A DNA MER1_type 1 225 -1 3 1654 282 171 0 0 chrX 140226341 140226411 -26423885 + A-rich Low_complexity Low_complexity 1 70 0 3 1654 21 36 0 0 chrX 140227339 140227367 -26422929 + AT_rich Low_complexity Low_complexity 1 28 0 3 1654 240 149 0 0 chrX 140228094 140228141 -26422155 + (TTG)n Simple_repeat Simple_repeat 2 48 0 3 1654 452 287 82 20 chrX 140230929 140231075 -26419221 + MIR3 SINE MIR 42 196 -12 3 1654 729 291 0 37 chrX 140232742 140232931 -26417365 - B3A SINE B2 -16 182 1 3 1654 465 327 79 13 chrX 140233114 140233266 -26417030 + RSINE1 SINE B4 4 165 0 3 1654 402 21 0 0 chrX 140233362 140233409 -26416887 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 1654 336 48 0 0 chrX 140233409 140233450 -26416846 + (GA)n Simple_repeat Simple_repeat 2 43 0 3 1654 842 244 189 9 chrX 140233635 140233958 -26416338 - Lx8 LINE L1 -1 7472 7092 3 1654 856 211 5 74 chrX 140234526 140234741 -26415555 - ORR1D1 LTR MaLR -174 200 1 3 1654 246 236 0 0 chrX 140234811 140234866 -26415430 + GA-rich Low_complexity Low_complexity 1 55 0 3 1654 232 294 47 0 chrX 140235308 140235393 -26414903 - L1M2 LINE L1 -551 5740 5652 3 1654 208 245 0 0 chrX 140237425 140237474 -26412822 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1654 723 81 0 0 chrX 140239433 140239532 -26410764 + (AATAG)n Simple_repeat Simple_repeat 2 100 0 3 1654 563 367 47 25 chrX 140244375 140244652 -26405644 + B4A SINE B4 2 284 -8 3 1655 381 131 0 0 chrX 140248000 140248061 -26402235 + (GAAAA)n Simple_repeat Simple_repeat 1 61 0 3 1655 636 199 88 7 chrX 140249083 140249220 -26401076 + B1_Mus1 SINE Alu 1 148 0 3 1655 270 276 108 10 chrX 140249360 140249554 -26400742 + L1MB8 LINE L1 5782 5994 -190 3 1655 812 168 260 4 chrX 140249604 140249665 -26400631 - Lx9 LINE L1 -8 7636 7575 3 1655 504 0 0 0 chrX 140249665 140249721 -26400575 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 1655 812 168 260 4 chrX 140249721 140249940 -26400356 - Lx9 LINE L1 -70 7574 7285 3 1655 317 281 0 10 chrX 140249983 140250087 -26400209 + L1MB8 LINE L1 6064 6166 -12 3 1655 444 257 18 9 chrX 140251036 140251146 -26399150 + PB1D10 SINE Alu 1 111 -6 3 1655 353 333 8 60 chrX 140251329 140251463 -26398833 + ID_B1 SINE B4 23 149 -75 3 1655 212 277 138 32 chrX 140252137 140252260 -26398036 + MIRb SINE MIR 31 166 -102 3 1655 252 0 0 0 chrX 140252296 140252324 -26397972 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1655 586 304 14 7 chrX 140252333 140252472 -26397824 - RSINE1 SINE B4 -24 141 2 3 1655 879 140 15 0 chrX 140252507 140252643 -26397653 - B1_Mur3 SINE Alu -7 142 5 3 1655 264 30 0 0 chrX 140253330 140253363 -26396933 + (TC)n Simple_repeat Simple_repeat 1 33 0 3 1655 194 0 39 0 chrX 140253772 140253798 -26396498 + (CAA)n Simple_repeat Simple_repeat 1 27 0 3 1655 561 14 0 0 chrX 140254505 140254576 -26395720 + L1Md_T LINE L1 6510 6580 -2 3 1655 456 19 0 0 chrX 140254607 140254660 -26395636 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 3 1655 184 333 15 15 chrX 140255176 140255243 -26395053 + MIRc SINE MIR 82 148 -120 3 1655 180 0 0 0 chrX 140255763 140255783 -26394513 + (GAA)n Simple_repeat Simple_repeat 2 21 0 3 1655 821 145 82 7 chrX 140257254 140257400 -26392896 + RSINE1 SINE B4 3 159 -6 3 1655 459 0 0 0 chrX 140257711 140257762 -26392534 + (TTTTG)n Simple_repeat Simple_repeat 3 53 0 3 1655 536 63 31 31 chrX 140258964 140259062 -26391234 - L1Md_F2 LINE L1 -1 6581 6484 3 1655 188 276 0 112 chrX 140259576 140259674 -26390622 + L3 LINE CR1 2816 2902 -1587 3 1655 323 304 8 34 chrX 140259754 140259873 -26390423 + MIRc SINE MIR 109 224 -44 3 1655 205 232 347 0 chrX 140260155 140260250 -26390046 - MIR3 SINE MIR -27 181 54 3 1655 414 0 0 0 chrX 140260705 140260751 -26389545 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1655 612 0 0 0 chrX 140261770 140261838 -26388458 + (CTG)n Simple_repeat Simple_repeat 2 69 0 3 1655 242 221 0 38 chrX 140262869 140262949 -26387347 + GA-rich Low_complexity Low_complexity 6 82 0 3 1655 186 295 16 16 chrX 140263387 140263449 -26386847 - L3 LINE CR1 -155 4334 4273 3 1655 189 0 0 0 chrX 140263597 140263618 -26386678 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1655 465 76 0 0 chrX 140263916 140263982 -26386314 + (TG)n Simple_repeat Simple_repeat 2 67 0 3 1655 689 341 39 80 chrX 140264156 140264720 -26385576 - L3 LINE CR1 -1050 3439 2899 3 1655 378 239 48 71 chrX 140264707 140264862 -26385434 - MIR SINE MIR -54 154 4 3 1655 378 282 40 53 chrX 140265207 140265357 -26384939 + MIR SINE MIR 57 204 -58 3 1655 252 339 58 25 chrX 140265434 140265555 -26384741 - L2b LINE L2 0 3375 3251 3 1655 2038 213 45 21 chrX 140265626 140266092 -26384204 - Lx9 LINE L1 -367 7277 6801 3 1655 1359 184 23 70 chrX 140266082 140266467 -26383829 + Lx9 LINE L1 7277 7643 -1 3 1655 621 308 89 18 chrX 140266740 140267210 -26383086 - Lx9 LINE L1 -292 7181 6651 3 1655 1122 285 26 3 chrX 140267235 140267545 -26382751 - Lx9 LINE L1 -987 6657 6341 3 1655 555 16 0 0 chrX 140267547 140267611 -26382685 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 1655 423 0 0 0 chrX 140267818 140267865 -26382431 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 1655 447 52 0 0 chrX 140268827 140268885 -26381411 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 1655 328 300 0 0 chrX 140268893 140268973 -26381323 - RMER30 DNA MER1_type -116 86 7 3 1655 292 261 11 11 chrX 140269485 140269574 -26380722 + GA-rich Low_complexity Low_complexity 2 90 0 3 1655 242 320 90 0 chrX 140270062 140270162 -26380134 + MamRep434 DNA TcMar 310 418 -8 3 1655 468 0 0 0 chrX 140270206 140270258 -26380038 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1655 21 36 0 0 chrX 140270463 140270491 -26379805 + AT_rich Low_complexity Low_complexity 1 28 0 3 1655 240 277 0 0 chrX 140270899 140270964 -26379332 + L1MD1 LINE L1 6107 6171 -71 3 1655 392 343 43 0 chrX 140271383 140271523 -26378773 - MER45A DNA Tip100 -18 160 15 3 1655 510 152 0 0 chrX 140271667 140271759 -26378537 + (TTTAG)n Simple_repeat Simple_repeat 5 96 0 3 1655 785 286 10 20 chrX 140271772 140271972 -26378324 + B3 SINE B2 16 213 -3 3 1655 676 244 79 13 chrX 140272009 140272237 -26378059 + Lx7 LINE L1 7166 7408 -288 3 1655 482 393 36 21 chrX 140272462 140272792 -26377504 + L1MDa LINE L1 78 412 -6221 3 1655 810 217 61 6 chrX 140272975 140273156 -26377140 + Lx7 LINE L1 7034 7224 -472 3 1655 849 188 0 0 chrX 140273156 140273300 -26376996 + B1_Mur4 SINE Alu 2 145 -5 3 1655 943 129 23 11 chrX 140273300 140273660 -26376636 + GA-rich Low_complexity Low_complexity 1 364 0 3 1655 500 244 15 0 chrX 140273667 140273798 -26376498 + Lx7 LINE L1 7205 7337 -359 3 1655 24 32 0 0 chrX 140273819 140273850 -26376446 + AT_rich Low_complexity Low_complexity 1 31 0 3 1655 30 27 0 0 chrX 140274327 140274364 -26375932 + AT_rich Low_complexity Low_complexity 1 37 0 3 1655 498 88 0 0 chrX 140274420 140274500 -26375796 - MusHAL1 LINE L1 -627 2085 2006 3 1655 808 78 9 0 chrX 140274496 140274612 -26375684 - L1VL2 LINE L1 -5728 607 491 3 1655 13755 4 0 0 chrX 140274639 140276252 -26374044 + L1Md_A LINE L1 3974 5586 -297 3 1655 9093 1 0 0 chrX 140276252 140277248 -26373048 + L1Md_A LINE L1 5587 6582 0 3 1655 877 169 0 0 chrX 140277259 140277401 -26372895 + B1_Mus1 SINE Alu 1 142 -6 3 1655 441 0 0 0 chrX 140277403 140277452 -26372844 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 3 1655 1261 214 49 21 chrX 140277484 140277813 -26372483 + Lx7 LINE L1 7358 7695 -1 3 1655 26 0 0 0 chrX 140277875 140277901 -26372395 + AT_rich Low_complexity Low_complexity 1 26 0 3 1655 251 311 170 13 chrX 140278002 140278155 -26372141 - ORR1D2 LTR MaLR -37 333 157 3 1655 638 312 6 23 chrX 140278582 140278759 -26371537 - B3A SINE B2 -16 182 9 4 1655 450 119 0 0 chrX 140278776 140278860 -26371436 + (TTTA)n Simple_repeat Simple_repeat 3 86 0 4 1655 462 292 29 21 chrX 140278860 140279000 -26371296 - RSINE1 SINE B4 -22 143 3 4 1655 259 171 0 0 chrX 140279451 140279492 -26370804 + L2c LINE L2 3297 3337 -50 4 1655 274 307 228 0 chrX 140281821 140281922 -26368374 - L2b LINE L2 0 3375 3252 4 1655 844 271 117 37 chrX 140282486 140282812 -26367484 + Charlie19a DNA Charlie 34 385 -1 4 1655 232 203 169 39 chrX 140282832 140282909 -26367387 + RLTR13D3 LTR ERVK 40 126 -988 4 1655 639 231 67 28 chrX 140282939 140283117 -26367179 + Tigger10 DNA Tigger 830 1014 -829 4 1655 318 50 0 0 chrX 140283506 140283546 -26366750 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1655 256 205 77 0 chrX 140283559 140283637 -26366659 - L1MA7 LINE L1 -65 6226 6143 4 1655 328 226 178 117 chrX 140283651 140283683 -26366613 - B2_Mm2 SINE B2 -4 191 165 4 1655 420 20 0 0 chrX 140283683 140283732 -26366564 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1655 557 226 178 117 chrX 140283732 140283879 -26366417 - B3A SINE B2 -31 164 1 4 1655 192 293 40 13 chrX 140284367 140284443 -26365853 + MIRb SINE MIR 89 166 -102 4 1655 411 376 76 52 chrX 140284699 140285401 -26364895 + L2b LINE L2 2476 3199 -176 4 1655 457 325 24 43 chrX 140285607 140285816 -26364480 + L2b LINE L2 2952 3156 -219 4 1655 236 360 63 16 chrX 140286306 140286433 -26363863 + MIR3 SINE MIR 3 135 -73 4 1655 391 313 39 20 chrX 140286450 140286603 -26363693 + MER5A1 DNA MER1_type 3 158 -8 4 1655 189 74 0 0 chrX 140287978 140288005 -26362291 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1655 28 29 0 0 chrX 140288052 140288087 -26362209 + AT_rich Low_complexity Low_complexity 1 35 0 4 1655 259 339 34 34 chrX 140288181 140288300 -26361996 - MER5A DNA MER1_type -40 149 31 4 1655 6871 48 4 0 chrX 140288380 140289218 -26361078 + L1Md_F3 LINE L1 5730 6570 -14 4 1655 390 321 35 73 chrX 140289324 140289583 -26360713 - Charlie18a DNA MER1_type -41 301 53 4 1655 417 250 0 0 chrX 140290250 140290342 -26359954 + MIR3 SINE MIR 115 206 -2 4 1655 203 200 0 0 chrX 140293543 140293578 -26356718 + A-rich Low_complexity Low_complexity 1 35 0 4 1655 423 0 0 0 chrX 140294163 140294210 -26356086 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1655 527 333 26 41 chrX 140294896 140295090 -26355206 + MIR3 SINE MIR 10 200 -8 4 1655 234 0 0 0 chrX 140295327 140295353 -26354943 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 1655 405 136 0 0 chrX 140295353 140295419 -26354877 + (GA)n Simple_repeat Simple_repeat 2 67 0 4 1655 360 0 0 0 chrX 140296458 140296498 -26353798 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1655 26 0 0 0 chrX 140298243 140298269 -26352027 + AT_rich Low_complexity Low_complexity 1 26 0 4 1655 387 0 0 0 chrX 140298390 140298433 -26351863 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 1655 288 320 25 32 chrX 140298446 140298604 -26351692 + L1M4 LINE L1 511 667 -5875 4 1655 446 367 0 9 chrX 140298614 140298826 -26351470 + L1M4 LINE L1 582 791 -5751 4 1655 462 229 0 90 chrX 140299325 140299469 -26350827 - L1MA9 LINE L1 -305 6007 5877 4 1655 338 293 69 15 chrX 140299903 140300163 -26350133 - L1M4 LINE L1 -3543 2603 2330 4 1655 347 287 39 39 chrX 140300247 140300425 -26349871 - L1M4 LINE L1 -3859 2287 2110 4 1655 192 77 0 0 chrX 140301068 140301094 -26349202 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1655 191 302 33 44 chrX 140301666 140301756 -26348540 + MIRc SINE MIR 130 218 -50 4 1655 465 297 127 20 chrX 140302303 140302595 -26347701 + L1MC4 LINE L1 7576 7898 -144 4 1655 21 57 0 0 chrX 140302776 140302811 -26347485 + AT_rich Low_complexity Low_complexity 1 35 0 4 1655 363 73 0 0 chrX 140303616 140303671 -26346625 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1655 630 259 0 92 chrX 140303683 140303836 -26346460 - RSINE1 SINE B4 -24 141 3 4 1655 383 146 148 50 chrX 140303980 140304081 -26346215 - Lx9 LINE L1 -170 7474 7364 4 1655 739 306 11 16 chrX 140304563 140304752 -26345544 - B3A SINE B2 -10 188 1 4 1655 283 310 35 17 chrX 140305508 140305623 -26344673 - MIRc SINE MIR -38 230 114 4 1655 206 264 0 86 chrX 140305792 140305908 -26344388 + A-rich Low_complexity Low_complexity 4 109 0 4 1655 780 11 0 0 chrX 140307088 140307177 -26343119 + (GA)n Simple_repeat Simple_repeat 1 89 0 4 1655 239 317 48 12 chrX 140308749 140308832 -26341464 - ID SINE ID -136 88 3 4 1655 231 194 32 0 chrX 140309353 140309415 -26340881 + T-rich Low_complexity Low_complexity 3 66 0 4 1655 253 223 304 39 chrX 140309516 140309742 -26340554 + MER33 DNA MER1_type 18 303 -21 4 1655 499 307 36 24 chrX 140309974 140310141 -26340155 + B4A SINE B4 81 249 -43 4 1655 772 268 26 37 chrX 140310559 140310749 -26339547 - B3 SINE B2 -27 189 2 4 1655 262 293 93 50 chrX 140313164 140313304 -26336992 - MIRb SINE MIR -5 263 118 4 1655 242 333 43 0 chrX 140314621 140314714 -26335582 - MIR SINE MIR -75 133 37 4 1655 234 254 0 60 chrX 140314907 140314974 -26335322 + A-rich Low_complexity Low_complexity 3 65 0 4 1655 285 355 13 19 chrX 140317123 140317281 -26333015 + L2 LINE L2 1897 2053 -1366 4 1655 189 0 0 0 chrX 140317281 140317302 -26332994 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1655 1341 65 0 0 chrX 140317608 140317778 -26332518 - L1_Mus1 LINE L1 0 6567 6398 4 1655 185 301 57 57 chrX 140318493 140318581 -26331715 - MIRc SINE MIR -108 160 73 4 1655 209 238 62 16 chrX 140319350 140319414 -26330882 + MIR3 SINE MIR 90 156 -52 4 1655 237 293 26 39 chrX 140319427 140319505 -26330791 - Charlie24 DNA MER1_type -13 2437 2361 4 1655 211 229 0 20 chrX 140319583 140319632 -26330664 + MIR3 SINE MIR 142 189 -19 4 1655 269 373 92 37 chrX 140320203 140320651 -26329645 - LTR33 LTR ERVL -4 511 23 4 1655 216 0 0 0 chrX 140321743 140321767 -26328529 + (CAGA)n Simple_repeat Simple_repeat 2 25 0 4 1655 26 30 0 0 chrX 140322471 140322504 -26327792 + AT_rich Low_complexity Low_complexity 1 33 0 4 1655 202 182 36 0 chrX 140324154 140324209 -26326087 + (TATAA)n Simple_repeat Simple_repeat 4 60 0 4 1655 222 128 0 0 chrX 140324783 140324822 -26325474 + (A)n Simple_repeat Simple_repeat 1 39 0 4 1655 3222 67 0 0 chrX 140325307 140325723 -26324573 + L1Md_F2 LINE L1 6167 6582 0 4 1655 224 121 0 94 chrX 140325881 140325945 -26324351 + A-rich Low_complexity Low_complexity 1 58 0 4 1655 199 410 17 8 chrX 140326358 140326476 -26323820 + MIR3 SINE MIR 3 121 -87 4 1655 299 380 68 34 chrX 140326802 140327036 -26323260 + L3 LINE CR1 4004 4245 -244 4 1655 1001 59 66 7 chrX 140327125 140327261 -26323035 + B1_Mm SINE Alu 3 146 -1 4 1655 1616 70 4 9 chrX 140328109 140328341 -26321955 - L1Md_F2 LINE L1 -2 6580 6350 4 1655 326 347 33 25 chrX 140329783 140329904 -26320392 - ID_B1 SINE B4 -25 199 78 4 1655 333 335 48 27 chrX 140330492 140330679 -26319617 + L1M5 LINE L1 5330 5520 -604 4 1655 446 356 58 11 chrX 140331219 140331409 -26318887 - MER20 DNA MER1_type -20 199 1 4 1655 303 252 45 9 chrX 140333811 140333923 -26316373 - L1MB8 LINE L1 -6 6172 6057 4 1655 234 0 0 0 chrX 140333938 140333964 -26316332 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1655 260 339 0 0 chrX 140334142 140334204 -26316092 - tRNA-Ala-GCY_ tRNA tRNA -13 62 1 4 1655 306 377 12 30 chrX 140335179 140335346 -26314950 + MER5A1 DNA MER1_type 1 164 -2 4 1655 204 321 18 0 chrX 140335610 140335666 -26314630 - MER5B DNA MER1_type 0 178 122 4 1655 200 114 29 0 chrX 140335750 140335785 -26314511 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 4 1655 493 257 55 23 chrX 140335906 140336125 -26314171 - L1ME2z LINE L1 -165 6279 6054 4 1655 218 282 50 76 chrX 140336237 140336356 -26313940 + MIR SINE MIR 78 193 -69 4 1655 185 301 118 65 chrX 140336452 140336605 -26313691 - MIRb SINE MIR -107 161 1 4 1655 351 0 0 0 chrX 140336748 140336787 -26313509 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1655 185 389 0 0 chrX 140338474 140338546 -26311750 - MIRc SINE MIR -109 159 88 4 1655 345 352 0 18 chrX 140338745 140338855 -26311441 + B1F SINE Alu 1 108 -41 4 1655 267 31 0 0 chrX 140339895 140339927 -26310369 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 1655 367 328 44 22 chrX 140340097 140340278 -26310018 - MER5A DNA MER1_type -1 188 4 4 1655 234 286 26 0 chrX 140340571 140340648 -26309648 - ID4_ SINE ID -2 81 3 4 1655 349 288 18 18 chrX 140340836 140340949 -26309347 - PB1D7 SINE Alu -7 113 1 4 1655 697 121 13 32 chrX 140341775 140341929 -26308367 + CT-rich Low_complexity Low_complexity 1 151 0 4 1655 282 29 0 0 chrX 140341997 140342032 -26308264 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1655 702 192 13 82 chrX 140343170 140343329 -26306967 - B1_Mur1 SINE Alu 0 149 2 4 1655 402 240 20 2 chrX 140343515 140343635 -26306661 - L1M4 LINE L1 -1480 4666 4546 4 1655 279 0 0 0 chrX 140343699 140343730 -26306566 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1655 248 347 48 14 chrX 140343783 140343929 -26306367 - MIRc SINE MIR -115 153 3 4 1655 303 318 68 8 chrX 140343989 140344122 -26306174 - B1F1 SINE Alu -8 141 1 4 1655 25 65 0 0 chrX 140344641 140344687 -26305609 + AT_rich Low_complexity Low_complexity 1 46 0 4 1655 280 328 74 63 chrX 140345233 140345422 -26304874 + MIRc SINE MIR 20 210 -58 4 1655 597 40 0 0 chrX 140345672 140345748 -26304548 + (GA)n Simple_repeat Simple_repeat 1 76 0 4 1655 194 214 34 51 chrX 140345835 140345894 -26304402 - MIR SINE MIR -104 158 101 4 1655 185 94 31 0 chrX 140346759 140346791 -26303505 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 1655 843 138 8 8 chrX 140347481 140347612 -26302684 - B1_Mus1 SINE Alu 0 148 18 5 1655 326 228 44 114 chrX 140347515 140347629 -26302667 - MT2B LTR ERVL -337 264 159 5 1655 579 298 40 28 chrX 140347629 140347805 -26302491 + MLT2D LTR ERVL 383 560 0 5 1655 452 227 64 32 chrX 140347858 140348045 -26302251 + L1MA6 LINE L1 6101 6293 -7 5 1655 5686 113 53 0 chrX 140349191 140349327 -26300969 + L1_Mus1 LINE L1 4912 5050 -833 5 1655 204 40 0 0 chrX 140349327 140349352 -26300944 + (G)n Simple_repeat Simple_repeat 1 25 0 5 1655 7276 77 20 1 chrX 140349352 140350822 -26299474 + L1_Mus1 LINE L1 5051 6567 0 5 1655 852 242 30 10 chrX 140351166 140351366 -26298930 + ID_B1 SINE B4 3 206 -18 5 1655 418 243 126 44 chrX 140351391 140351550 -26298746 + ORSL DNA Tip100 97 268 -7 5 1655 282 246 238 0 chrX 140352622 140352748 -26297548 + MER103 DNA DNA 8 163 -3 5 1655 224 366 0 10 chrX 140353467 140353569 -26296727 + L2 LINE L2 2288 2388 -1031 5 1655 338 294 104 51 chrX 140353977 140354438 -26295858 + L1M4 LINE L1 3192 3725 -2421 5 1655 639 0 0 0 chrX 140354564 140354635 -26295661 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 5 1655 216 0 0 0 chrX 140354649 140354673 -26295623 + (GAAA)n Simple_repeat Simple_repeat 1 24 0 5 1655 993 82 6 28 chrX 140354682 140354858 -26295438 + (GGAA)n Simple_repeat Simple_repeat 1 172 0 5 1655 23 0 0 0 chrX 140354987 140355010 -26295286 + AT_rich Low_complexity Low_complexity 1 23 0 5 1655 473 211 17 68 chrX 140355319 140355436 -26294860 + PB1D9 SINE Alu 9 119 -1 5 1655 242 186 28 14 chrX 140356039 140356110 -26294186 + (TG)n Simple_repeat Simple_repeat 2 73 0 5 1655 266 73 24 0 chrX 140356110 140356151 -26294145 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1655 322 328 8 16 chrX 140356236 140356357 -26293939 - B4A SINE B4 -4 288 169 5 1655 1156 62 0 0 chrX 140357365 140357510 -26292786 + B1_Mus2 SINE Alu 1 145 -2 5 1655 504 105 0 0 chrX 140358582 140358658 -26291638 + (TG)n Simple_repeat Simple_repeat 1 76 0 5 1655 189 0 0 0 chrX 140359337 140359358 -26290938 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1655 228 35 0 0 chrX 140359855 140359884 -26290412 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1655 499 310 76 68 chrX 140360323 140360572 -26289724 + MIRb SINE MIR 18 268 0 5 1655 234 350 0 115 chrX 140360745 140360797 -26289499 + ID SINE ID 43 81 -143 5 1655 493 291 8 8 chrX 140360797 140360925 -26289371 + B1F2 SINE Alu 2 129 -20 5 1655 468 81 0 0 chrX 140360940 140361014 -26289282 + (GA)n Simple_repeat Simple_repeat 2 75 0 5 1655 485 317 0 8 chrX 140361166 140361290 -26289006 + ID_B1 SINE B4 82 204 -20 5 1655 305 272 48 24 chrX 140361323 140361406 -26288890 + PB1D9 SINE Alu 1 85 -35 5 1655 247 385 0 0 chrX 140361406 140361484 -26288812 + MIRc SINE MIR 75 152 -116 5 1655 418 303 0 42 chrX 140368227 140368381 -26281915 - B1_Mur2 SINE Alu -2 147 2 5 1655 1084 222 36 30 chrX 140368435 140368737 -26281559 + Lx7 LINE L1 5601 5904 -1792 5 1655 468 0 0 0 chrX 140368741 140368793 -26281503 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1655 1463 256 98 48 chrX 140368843 140369402 -26280894 + Lx8 LINE L1 6644 7230 -243 5 1655 21 0 0 0 chrX 140369490 140369511 -26280785 + AT_rich Low_complexity Low_complexity 1 21 0 5 1655 235 318 15 0 chrX 140369721 140369787 -26280509 + MIR SINE MIR 28 94 -168 5 1655 250 250 48 48 chrX 140369787 140369871 -26280425 + MLT1A LTR MaLR 61 144 -221 5 1655 551 316 7 7 chrX 140369871 140370011 -26280285 - B1F SINE Alu -1 148 9 5 1655 270 287 50 0 chrX 140370081 140370182 -26280114 + MLT1A LTR MaLR 267 372 -2 5 1655 31739 85 6 11 chrX 140370290 140376492 -26273804 - L1Md_F2 LINE L1 -2 6580 420 5 1655 289 247 27 0 chrX 140377064 140377137 -26273159 + CT-rich Low_complexity Low_complexity 3 77 0 5 1655 324 0 0 0 chrX 140377181 140377217 -26273079 + (TCTA)n Simple_repeat Simple_repeat 4 39 0 5 206 4703 117 35 11 chrX 140377951 140378667 -26271629 - Lx4A LINE L1 0 7058 6326 5 1656 367 291 101 44 chrX 140378864 140379158 -26271138 + HAL1-3A_ME LINE L1 2284 2439 -419 5 1656 314 329 67 40 chrX 140379165 140379314 -26270982 + HAL1-3A_ME LINE L1 2287 2439 -419 5 1656 410 286 14 14 chrX 140379315 140379457 -26270839 + GA-rich Low_complexity Low_complexity 1 142 0 5 1656 319 331 71 26 chrX 140379461 140379616 -26270680 + HAL1-3A_ME LINE L1 2284 2445 -413 5 1656 351 297 58 51 chrX 140379611 140379767 -26270529 + HAL1-3A_ME LINE L1 2282 2438 -420 5 1656 346 276 141 7 chrX 140379791 140379926 -26270370 + HAL1-3A_ME LINE L1 2284 2436 -422 5 1656 494 288 3 46 chrX 140379950 140380206 -26270090 + GA-rich Low_complexity Low_complexity 1 244 0 5 1656 506 272 85 58 chrX 140380211 140380258 -26270038 - L1MA5 LINE L1 -133 6167 6119 5 1656 3862 157 83 7 chrX 140380258 140380943 -26269353 + RMER19A LTR ERVK 1 737 0 5 1656 506 272 85 58 chrX 140380943 140381058 -26269238 - L1MA5 LINE L1 -182 6118 6006 5 1656 453 50 0 0 chrX 140381058 140381118 -26269178 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1656 506 272 85 58 chrX 140381118 140381352 -26268944 - L1MA5 LINE L1 -295 6005 5760 5 1656 1442 298 26 13 chrX 140381675 140382144 -26268152 - Tigger1 DNA MER2_type -1943 475 1 5 1656 1368 269 153 39 chrX 140382178 140382905 -26267391 - L1MA5 LINE L1 -1674 4469 3675 5 1656 477 0 0 0 chrX 140382905 140382958 -26267338 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1656 437 0 19 0 chrX 140382958 140383010 -26267286 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 1656 1368 269 153 39 chrX 140383010 140383367 -26266929 - L1MA5 LINE L1 -2469 3674 3261 5 1656 4070 81 4 1 chrX 140383392 140384113 -26266183 + L1_Mus2 LINE L1 5279 6000 -566 5 1656 559 304 6 30 chrX 140384194 140384360 -26265936 - RSINE1 SINE B4 -2 163 2 5 1656 461 352 20 20 chrX 140384652 140384800 -26265496 + RSINE1 SINE B4 8 155 -10 5 1656 217 312 68 11 chrX 140385047 140385167 -26265129 + MIRc SINE MIR 75 211 -57 5 1656 373 311 101 0 chrX 140385286 140385405 -26264891 - MLT1G3 LTR MaLR -29 566 436 5 1656 254 320 129 50 chrX 140385535 140385775 -26264521 - LTR48 LTR ERV1 0 787 529 5 1656 274 383 21 0 chrX 140386016 140386110 -26264186 - MLT1G3 LTR MaLR -428 127 32 5 1656 325 304 35 17 chrX 140386112 140386286 -26264010 + L1MA4A LINE L1 5741 5917 -386 5 1656 471 113 0 0 chrX 140386319 140386390 -26263906 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 5 1656 186 43 0 0 chrX 140386719 140386742 -26263554 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1656 284 150 50 0 chrX 140386796 140386856 -26263440 - RMER19B LTR ERVK -9 893 831 5 1656 9381 79 8 2 chrX 140386856 140388773 -26261523 - L1Md_F2 LINE L1 -3 6579 4654 5 1656 427 102 0 0 chrX 140388770 140388829 -26261467 - L1_Mm LINE L1 -259 5624 5566 5 1656 12541 100 4 7 chrX 140388826 140390837 -26259459 - L1Md_F2 LINE L1 -2837 3046 1072 5 1656 8185 48 0 0 chrX 140391214 140392356 -26257940 - L1Md_T LINE L1 0 6582 5441 5 1656 195 125 0 0 chrX 140392357 140392397 -26257899 + (T)n Simple_repeat Simple_repeat 1 40 0 5 1656 39944 25 0 0 chrX 140392399 140397812 -26252484 - L1Md_A LINE L1 0 6582 1170 5 1656 4769 142 48 34 chrX 140397818 140398751 -26251545 - L1Md_A LINE L1 -5411 1205 260 5 1656 1880 241 70 35 chrX 140398743 140399580 -26250716 - L1Md_F2 LINE L1 -5493 1123 261 5 1656 373 243 179 46 chrX 140399667 140399818 -26250478 + L1MB8 LINE L1 6008 6178 0 5 1656 308 302 14 21 chrX 140400116 140400219 -26250077 + PB1D10 SINE Alu 6 109 -40 5 1656 212 103 0 0 chrX 140400305 140400334 -26249962 - B3 SINE B2 -168 48 20 5 1656 2935 52 0 3 chrX 140400334 140400682 -26249614 + L1Md_F2 LINE L1 6235 6581 -1 5 1656 498 309 49 9 chrX 140401302 140401592 -26248704 + L1ME2 LINE L1 5572 5870 -489 5 1656 557 302 25 55 chrX 140401673 140401873 -26248423 + Lx9 LINE L1 6334 6527 -1117 5 1656 636 269 19 13 chrX 140401882 140402040 -26248256 - Lx9 LINE L1 -418 7226 7068 5 1656 828 314 59 29 chrX 140402126 140402467 -26247829 + Lx8 LINE L1 7030 7380 -93 5 1656 3327 139 71 61 chrX 140402583 140403219 -26247077 - RLTR26 LTR ERVK 0 642 1 5 1656 299 239 67 22 chrX 140403400 140403490 -26246806 - MER34 LTR ERV1 -73 469 376 5 1656 1256 49 0 0 chrX 140403707 140403850 -26246446 - B1_Mus1 SINE Alu -4 144 2 5 1656 727 259 128 45 chrX 140404029 140404313 -26245983 - MTC LTR MaLR -14 393 89 5 1656 1576 248 0 6 chrX 140404313 140404633 -26245663 + Lx6 LINE L1 7007 7324 -136 5 1656 688 191 417 23 chrX 140404638 140404854 -26245442 - Lx4B LINE L1 -1 7057 6757 5 1656 1381 146 25 78 chrX 140404858 140405260 -26245036 + RMER17C LTR ERVK 16 439 -519 5 1656 1865 166 82 5 chrX 140405304 140405718 -26244578 - Lx4B LINE L1 -260 6740 6274 5 1656 964 206 113 87 chrX 140405718 140406111 -26244185 + RMER17C LTR ERVK 1 439 -519 5 1656 266 132 0 0 chrX 140406114 140406160 -26244136 - Lx4B LINE L1 -760 6248 6203 5 1656 1442 205 46 17 chrX 140406164 140406592 -26243704 + Lx4B LINE L1 5936 6281 -716 5 1656 236 136 231 33 chrX 140406596 140406666 -26243630 - MTC LTR MaLR -336 85 4 5 1656 313 337 32 11 chrX 140406697 140406790 -26243506 + RSINE1 SINE B4 2 96 -69 5 1656 528 30 0 0 chrX 140406826 140406892 -26243404 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 1656 41466 14 3 6 chrX 140407149 140413547 -26236749 - L1Md_A LINE L1 -1 6581 208 5 1656 252 0 0 0 chrX 140413984 140414012 -26236284 + (CCA)n Simple_repeat Simple_repeat 3 30 0 5 1656 440 242 106 0 chrX 140414508 140414640 -26235656 - B3A SINE B2 -50 148 3 5 1656 280 264 35 0 chrX 140414864 140414951 -26235345 - L1MD LINE L1 -2645 3501 3412 5 1656 270 222 149 17 chrX 140415054 140415228 -26235068 - L1MD LINE L1 -2718 3428 3232 5 1656 317 249 296 0 chrX 140415306 140415408 -26234888 - L1MD LINE L1 -2833 3313 3179 5 1656 396 55 0 0 chrX 140415408 140415463 -26234833 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1656 317 249 296 0 chrX 140415463 140415529 -26234767 - L1MD LINE L1 -2968 3178 3096 5 1656 225 291 197 14 chrX 140415605 140415828 -26234468 - L1MD LINE L1 -3509 2637 2374 5 1656 1909 163 19 3 chrX 140415906 140416214 -26234082 - Lx5 LINE L1 0 7050 6738 5 1656 1453 242 79 34 chrX 140416476 140416812 -26233484 - MTD LTR MaLR -4 415 62 5 1656 2821 179 92 9 chrX 140416812 140417343 -26232953 + RMER15 LTR ERVL 1 575 0 5 1656 1453 242 79 34 chrX 140417343 140417387 -26232909 - MTD LTR MaLR -358 61 18 5 1656 278 368 36 24 chrX 140417723 140417971 -26232325 + MIR SINE MIR 11 261 -1 5 1656 334 362 68 16 chrX 140418155 140418346 -26231950 + MIRb SINE MIR 33 233 -35 5 1656 261 338 25 0 chrX 140418458 140418538 -26231758 + RSINE1 SINE B4 74 155 -10 5 1656 1248 29 0 0 chrX 140418592 140418731 -26231565 + B1_Mus2 SINE Alu 1 139 -8 5 1656 722 283 101 5 chrX 140418785 140418973 -26231323 + ID_B1 SINE B4 2 207 -17 5 1656 389 231 130 11 chrX 140419327 140419419 -26230877 + PB1D10 SINE Alu 9 111 -6 5 1656 597 350 112 30 chrX 140419813 140420247 -26230049 + MLT1H1 LTR MaLR 5 474 -81 5 1656 819 352 138 24 chrX 140420320 140420602 -26229694 + MER21B LTR ERV1 1 313 -550 6 1656 333 0 0 0 chrX 140420602 140420639 -26229657 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1656 819 352 138 24 chrX 140420639 140420769 -26229527 + MER21B LTR ERV1 314 460 -403 6 1656 1025 226 55 0 chrX 140420796 140420995 -26229301 - B3 SINE B2 -6 210 1 6 1656 423 38 0 0 chrX 140421123 140421176 -26229120 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1656 570 340 6 0 chrX 140421181 140421343 -26228953 - RSINE1 SINE B4 0 165 3 6 1656 4867 220 35 22 chrX 140421433 140422521 -26227775 - Lx7 LINE L1 -24 7672 6571 6 1656 633 284 48 21 chrX 140422521 140422708 -26227588 + MER21B LTR ERV1 561 752 -111 6 1656 3422 46 5 5 chrX 140422756 140423152 -26227144 - MTA_Mm LTR MaLR 0 396 1 6 1656 16698 51 7 9 chrX 140423247 140425390 -26224906 - L1Md_F2 LINE L1 -12 6570 4443 6 1656 1680 47 5 0 chrX 140425390 140425581 -26224715 - B2_Mm1a SINE B2 0 193 2 6 1656 16698 52 6 16 chrX 140425581 140426232 -26224064 - L1Md_F2 LINE L1 -1441 4442 3792 6 1656 276 336 57 44 chrX 140426857 140427016 -26223280 + MIR3 SINE MIR 42 202 -6 6 1656 375 293 33 118 chrX 140427040 140427305 -26222991 - ORR1E LTR MaLR -61 298 46 6 1656 3668 144 36 18 chrX 140427404 140428011 -26222285 - RLTR17 LTR ERVK -74 618 1 6 1656 360 0 0 0 chrX 140428151 140428191 -26222105 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1656 659 249 115 16 chrX 140429160 140429352 -26220944 + ID_B1 SINE B4 3 213 -11 6 1656 554 152 0 152 chrX 140429709 140429841 -26220455 - RLTR14-int LTR ERV1 -638 4679 4568 6 1656 699 132 0 0 chrX 140430280 140430394 -26219902 + (GAA)n Simple_repeat Simple_repeat 3 116 0 6 1656 240 111 0 0 chrX 140430391 140430436 -26219860 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 1656 21 0 0 0 chrX 140430760 140430781 -26219515 + AT_rich Low_complexity Low_complexity 1 21 0 6 1656 241 158 35 17 chrX 140430982 140431040 -26219256 + T-rich Low_complexity Low_complexity 2 60 0 6 1656 1155 277 65 42 chrX 140431083 140431483 -26218813 + MTD LTR MaLR 11 419 0 6 1656 385 250 53 16 chrX 140431667 140431822 -26218474 + L1ME3A LINE L1 5818 5978 -262 6 1656 180 143 0 0 chrX 140431874 140431916 -26218380 + (GA)n Simple_repeat Simple_repeat 1 42 0 6 1656 329 270 87 29 chrX 140431936 140432039 -26218257 - PB1D10 SINE Alu -8 109 1 6 1656 258 300 27 18 chrX 140432234 140432346 -26217950 - L1ME3 LINE L1 -164 5998 5886 6 1656 291 177 0 16 chrX 140432348 140432411 -26217885 + Lx8 LINE L1 5151 5212 -635 6 1656 340 205 80 9 chrX 140432434 140432547 -26217749 + Lx9 LINE L1 7516 7636 -8 6 1656 486 0 0 0 chrX 140432549 140432603 -26217693 + (TAAAA)n Simple_repeat Simple_repeat 2 55 0 6 1656 667 254 31 43 chrX 140432613 140432868 -26217428 + Lx8 LINE L1 5279 5530 -317 6 1656 36127 64 14 14 chrX 140432877 140434518 -26215778 - L1Md_F3 LINE L1 -20 6564 4917 6 1656 232 161 59 88 chrX 140434518 140434586 -26215710 + RMER20A LTR ERVK 186 251 -265 6 1656 36127 64 14 14 chrX 140434586 140439035 -26211261 - L1Md_F3 LINE L1 -20 4916 446 6 1656 688 233 108 17 chrX 140439045 140439256 -26211040 + Lx8 LINE L1 5509 5768 -1705 6 1656 2655 71 12 0 chrX 140439256 140439592 -26210704 + Lx3_Mus LINE L1 6670 7009 0 6 1656 313 265 132 47 chrX 140439592 140439613 -26210683 + Lx8 LINE L1 5769 5792 -1681 6 1656 969 193 40 40 chrX 140439720 140439968 -26210328 + L1_Rod LINE L1 3799 4046 -1801 6 1656 437 0 19 0 chrX 140440627 140440680 -26209616 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1656 228 283 0 0 chrX 140440916 140440976 -26209320 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 1656 620 309 55 17 chrX 140441110 140441291 -26209005 + ID_B1 SINE B4 3 190 -34 6 1656 852 176 20 36 chrX 140441293 140441488 -26208808 + Lx6 LINE L1 2992 3183 -2697 6 1656 1890 194 18 6 chrX 140441656 140441998 -26208298 + Lx6 LINE L1 5535 5880 0 6 1656 565 115 23 0 chrX 140442036 140442123 -26208173 + MTC LTR MaLR 13 101 -320 6 1656 2367 51 3 0 chrX 140442123 140442415 -26207881 + L1VL1 LINE L1 451 743 -5679 6 1656 6154 88 1 6 chrX 140442415 140443205 -26207091 + L1_Mus1 LINE L1 5782 6567 0 6 1656 1566 221 33 12 chrX 140443219 140443554 -26206742 + MTC LTR MaLR 80 421 0 6 1656 3643 242 42 18 chrX 140443578 140444464 -26205832 + Lx6 LINE L1 5909 6815 -645 6 1656 1583 280 52 14 chrX 140444459 140444897 -26205399 + Lx6 LINE L1 6991 7445 -15 6 1656 4641 51 5 23 chrX 140444928 140445528 -26204768 - L1Md_F3 LINE L1 -1 6583 5995 6 1656 2362 63 0 0 chrX 140445528 140445815 -26204481 + L1Md_F2 LINE L1 5300 5586 -297 6 1656 8128 51 0 1 chrX 140445816 140446800 -26203496 + L1Md_F2 LINE L1 5588 6570 -12 6 1656 1439 207 15 27 chrX 140447183 140447511 -26202785 + RLTR21 LTR ERVK 1 324 -1248 6 1656 2247 194 39 47 chrX 140447550 140448187 -26202109 + RLTR21 LTR ERVK 551 1182 -390 6 1656 606 218 85 34 chrX 140448262 140448438 -26201858 - ORR1B2 LTR MaLR -182 185 1 6 1656 244 235 14 14 chrX 140448473 140448542 -26201754 + GA-rich Low_complexity Low_complexity 1 69 0 6 1656 192 167 0 0 chrX 140448545 140448593 -26201703 + (CATA)n Simple_repeat Simple_repeat 1 48 0 6 1656 405 0 0 0 chrX 140448661 140448706 -26201590 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1656 1521 32 0 5 chrX 140448933 140449120 -26201176 + L1Md_A LINE L1 6395 6580 -2 6 1656 33497 68 0 6 chrX 140449120 140453631 -26196665 + L1Md_F3 LINE L1 483 5069 -817 6 1656 2396 115 110 25 chrX 140453631 140454069 -26196227 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1656 33497 71 1 3 chrX 140454069 140454594 -26195702 + L1Md_F3 LINE L1 5070 5589 -297 6 1656 8591 27 6 3 chrX 140454594 140455588 -26194708 + L1Md_F3 LINE L1 5590 6586 -1 6 1656 339 312 13 9 chrX 140456245 140456439 -26193857 + MurSAT1 Satellite Satellite 1 194 -2 6 1656 312 258 19 6 chrX 140456824 140456926 -26193370 + MurSAT1 Satellite Satellite 1 103 0 6 1656 411 270 24 6 chrX 140457391 140457572 -26192724 + MurSAT1 Satellite Satellite 1 184 -2 6 1656 230 303 0 0 chrX 140457598 140457664 -26192632 + MurSAT1 Satellite Satellite 8 73 -47 6 1656 349 354 5 5 chrX 140458581 140458879 -26191417 + MurSAT1 Satellite Satellite 1 298 -1 6 1656 261 286 36 0 chrX 140459015 140459099 -26191197 + MurSAT1 Satellite Satellite 15 101 -19 6 1656 38671 31 1 0 chrX 140459398 140466026 -26184270 - L1Md_T LINE L1 0 6585 2 6 1656 435 318 0 0 chrX 140466091 140466241 -26184055 + MurSAT1 Satellite Satellite 1 150 -4 6 1656 372 336 0 0 chrX 140466412 140466531 -26183765 + MurSAT1 Satellite Satellite 1 119 -1 6 1656 376 281 41 41 chrX 140466563 140466721 -26183575 + MurSAT1 Satellite Satellite 1 158 0 6 1656 293 357 0 0 chrX 140466797 140466909 -26183387 + MurSAT1 Satellite Satellite 8 119 -1 6 1656 403 322 4 4 chrX 140467091 140467266 -26183030 + MurSAT1 Satellite Satellite 1 175 -1 6 1656 267 280 27 27 chrX 140467683 140467793 -26182503 + MurSAT1 Satellite Satellite 1 110 -10 6 1656 347 297 15 15 chrX 140467895 140468093 -26182203 + MurSAT1 Satellite Satellite 1 198 0 6 1656 305 325 5 5 chrX 140468195 140468341 -26181955 + MurSAT1 Satellite Satellite 1 146 -2 6 1656 300 252 7 0 chrX 140468816 140468926 -26181370 + MurSAT1 Satellite Satellite 1 110 -31 6 1656 300 311 0 0 chrX 140469605 140469733 -26180563 + MurSAT1 Satellite Satellite 1 128 -4 6 1656 318 311 116 6 chrX 140471598 140471779 -26178517 - MER2 DNA MER2_type -119 226 26 6 1656 188 341 34 68 chrX 140472467 140472615 -26177681 + L2b LINE L2 3028 3170 -205 6 1656 327 249 73 58 chrX 140472979 140473239 -26177057 - ORSL-2b DNA Tip100 -124 384 121 6 1656 390 42 0 0 chrX 140473643 140473691 -26176605 + (TC)n Simple_repeat Simple_repeat 2 49 0 6 1656 209 278 0 40 chrX 140473759 140473834 -26176462 + (TATATG)n Simple_repeat Simple_repeat 4 75 0 6 1656 30738 93 19 1 chrX 140474010 140476717 -26173579 - L1_Mus1 LINE L1 0 6567 3845 6 1656 483 18 0 0 chrX 140476717 140476773 -26173523 + (TA)n Simple_repeat Simple_repeat 2 57 0 6 1656 30738 125 27 19 chrX 140476773 140480037 -26170259 - L1_Mus1 LINE L1 -2039 3844 508 6 1656 521 274 60 47 chrX 140480109 140480343 -26169953 - L1_Mur3 LINE L1 -1509 4371 4135 6 1656 2510 88 158 0 chrX 140480355 140480765 -26169531 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1656 1267 124 40 62 chrX 140480766 140481052 -26169244 + IAPEz-int LTR ERVK 9 258 -7323 6 1656 226 267 0 0 chrX 140481054 140481099 -26169197 + RLTR27 LTR ERVK 231 275 -34 6 1656 3930 61 2 18 chrX 140481099 140481602 -26168694 + IAPEz-int LTR ERVK 168 662 -5819 6 1656 2242 72 0 0 chrX 140481602 140481880 -26168416 + IAPEz-int LTR ERVK 1359 1636 -4845 6 1656 6300 36 4 12 chrX 140481879 140482629 -26167667 + IAPEz-int LTR ERVK 5736 6479 -2 6 1656 2510 88 158 0 chrX 140482631 140483041 -26167255 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1656 310 289 54 3 chrX 140483044 140483207 -26167089 + Lx7 LINE L1 5514 5695 -2001 6 1656 223 106 64 0 chrX 140483240 140483287 -26167009 + (CATA)n Simple_repeat Simple_repeat 2 51 0 6 1656 497 237 44 8 chrX 140483529 140483679 -26166617 - ORR1D2 LTR MaLR 0 378 217 6 1656 598 265 53 35 chrX 140483694 140484024 -26166272 + L1VL2 LINE L1 317 656 -5702 6 1656 4038 137 13 3 chrX 140484022 140484730 -26165566 + MusHAL1 LINE L1 123 837 -1875 6 1656 3106 59 13 3 chrX 140484911 140485302 -26164994 - MTA_Mm LTR MaLR 0 396 2 6 1656 949 62 27 0 chrX 140485767 140485913 -26164383 - MusHAL1 LINE L1 -5 2707 2558 6 1656 16428 119 100 8 chrX 140485908 140490391 -26159905 - L1Md_F2 LINE L1 0 6582 1206 6 1656 3439 150 0 15 chrX 140490366 140490895 -26159401 - L1VL4 LINE L1 -5752 550 30 6 1656 2018 306 115 9 chrX 140491362 140492138 -26158158 - Lx6 LINE L1 -26 7434 6577 6 1656 1274 236 47 66 chrX 140493378 140493944 -26156352 + RMER12 LTR ERVK 9 583 -1265 6 1656 270 305 0 35 chrX 140494371 140494456 -26155840 + GA-rich Low_complexity Low_complexity 5 86 0 6 1656 275 294 17 137 chrX 140494541 140494774 -26155522 + RLTR22_Mus LTR ERVK 598 802 -1006 6 1656 4995 166 80 16 chrX 140494884 140495837 -26154459 - Lx4A LINE L1 0 7058 6045 6 1656 11847 77 25 1 chrX 140495858 140498303 -26151993 - L1Md_F2 LINE L1 -1 6581 3965 6 1656 8559 36 1 2 chrX 140498303 140500000 -26150296 - L1Md_A LINE L1 0 6582 4889 6 1656 3859 142 222 1 chrX 140500000 140500752 -26149544 - L1_Mur2 LINE L1 -995 4882 3965 1 1656 31837 88 39 3 chrX 140500753 140506730 -26143566 - L1Md_A LINE L1 0 6582 380 2 1656 6497 109 14 25 chrX 140506750 140507182 -26143114 - L1_Mur2 LINE L1 -3403 2474 2049 1 1656 270 81 0 0 chrX 140507182 140507219 -26143077 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1656 6497 109 14 25 chrX 140507219 140507843 -26142453 - L1_Mur2 LINE L1 -3829 2048 1430 1 1656 293 0 36 55 chrX 140507843 140507898 -26142398 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 4 1656 835 47 9 0 chrX 140507898 140508004 -26142292 - B1_Mm SINE Alu -10 137 31 5 1656 4718 162 62 22 chrX 140508004 140508873 -26141423 - L1_Mur2 LINE L1 -4447 1433 513 1 1656 759 204 72 94 chrX 140508873 140509110 -26141186 + RMER12 LTR ERVK 999 1279 -43 6 1657 349 260 0 3 chrX 140509421 140509509 -26140787 + IAPLTR3-int LTR ERVK 4880 5050 -1771 7 1657 2065 119 0 70 chrX 140511152 140511496 -26138800 - ORR1A4 LTR MaLR -9 320 1 8 1657 694 319 55 0 chrX 140511576 140511830 -26138466 + L1MB5 LINE L1 5824 6091 -83 9 1657 274 0 48 24 chrX 140511835 140511877 -26138419 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1 1657 1151 95 0 0 chrX 140511877 140512019 -26138277 - B1_Mus1 SINE Alu -5 143 2 1 1657 25 51 0 0 chrX 140512028 140512067 -26138229 + AT_rich Low_complexity Low_complexity 1 39 0 1 1657 7780 42 1 1 chrX 140512100 140513022 -26137274 - L1Md_F2 LINE L1 -11 6571 5650 1 1657 7059 126 81 21 chrX 140513031 140514672 -26135624 - Lx3C LINE L1 0 6976 5227 1 1657 1097 121 127 0 chrX 140514967 140515140 -26135156 - Lx2 LINE L1 -1 6996 6802 1 1657 225 0 0 0 chrX 140515476 140515501 -26134795 + (GTTTG)n Simple_repeat Simple_repeat 1 25 0 1 1657 436 298 59 30 chrX 140515503 140515638 -26134658 - B1F SINE Alu -3 146 8 1 1657 201 39 0 0 chrX 140515836 140515862 -26134434 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1657 242 29 0 28 chrX 140516780 140516816 -26133480 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1 1657 664 278 31 6 chrX 140517203 140517383 -26132913 - B3A SINE B2 -14 181 7 2 1657 11269 148 62 68 chrX 140517489 140519972 -26130324 + L1VL2 LINE L1 310 2650 -3236 2 1657 4172 86 20 20 chrX 140519972 140520531 -26129765 + L1_Mus3 LINE L1 6080 6638 0 2 1657 11269 78 18 0 chrX 140520531 140521758 -26128538 + L1VL2 LINE L1 2645 3893 -21 2 1657 440 287 37 0 chrX 140521819 140521927 -26128369 - B3A SINE B2 -81 117 6 2 1657 410 312 119 0 chrX 140522488 140522597 -26127699 - B1F SINE Alu -26 123 2 2 1657 180 274 126 10 chrX 140522663 140522766 -26127530 - MIRb SINE MIR -50 218 104 2 1657 474 18 0 0 chrX 140523976 140524031 -26126265 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1657 1447 94 0 6 chrX 140524330 140524512 -26125784 + B2_Mm2 SINE B2 1 181 -14 2 1657 210 368 50 44 chrX 140525366 140525548 -26124748 - MIRb SINE MIR -48 220 38 2 1657 455 309 162 39 chrX 140526826 140527101 -26123195 - MLT1D LTR MaLR 0 610 302 2 1657 2059 131 16 13 chrX 140527233 140527542 -26122754 - Lx4A LINE L1 0 7058 6749 3 1657 1170 128 22 0 chrX 140527542 140527722 -26122574 + Lx4A LINE L1 6566 6749 -309 3 1657 312 274 60 50 chrX 140527722 140527822 -26122474 - MLT1D LTR MaLR -381 124 24 2 1657 587 298 12 42 chrX 140527956 140528124 -26122172 + RSINE1 SINE B4 3 165 0 3 1657 1342 291 81 59 chrX 140528140 140529035 -26121261 + L1MB3 LINE L1 5305 6183 -1 3 1657 1428 170 31 54 chrX 140529496 140529830 -26120466 - Lx7 LINE L1 -1 7695 7370 3 1657 2076 107 14 3 chrX 140529830 140530120 -26120176 + Lx4A LINE L1 6764 7056 -2 3 1657 1428 170 31 54 chrX 140530120 140530134 -26120162 - Lx7 LINE L1 -327 7369 7356 3 1657 223 362 20 78 chrX 140530578 140530731 -26119565 - L2b LINE L2 -271 3104 2961 3 1657 3488 46 2 0 chrX 140530791 140531185 -26119111 + L1_Mus1 LINE L1 6173 6567 0 3 1657 360 0 0 0 chrX 140531277 140531317 -26118979 + (TC)n Simple_repeat Simple_repeat 2 41 0 3 1657 613 165 0 10 chrX 140531835 140531933 -26118363 + B2_Mm2 SINE B2 4 100 -95 3 1657 426 39 0 0 chrX 140531978 140532030 -26118266 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1657 197 339 85 0 chrX 140532838 140532956 -26117340 - L3b LINE CR1 -151 331 204 4 1657 32 0 0 0 chrX 140533850 140533882 -26116414 + AT_rich Low_complexity Low_complexity 1 32 0 4 1657 327 35 35 17 chrX 140533979 140534037 -26116259 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 4 1657 1885 55 0 0 chrX 140534238 140534458 -26115838 - L1Md_T LINE L1 -2 6580 6361 4 1657 1066 88 12 0 chrX 140534484 140534644 -26115652 + (TCC)n Simple_repeat Simple_repeat 2 163 0 4 1657 890 134 0 7 chrX 140534671 140534814 -26115482 - B1_Mus1 SINE Alu 0 148 7 4 1657 355 195 164 79 chrX 140534717 140534906 -26115390 - MT2B LTR ERVL -344 257 53 4 1657 386 259 0 0 chrX 140534913 140534994 -26115302 - Lx8 LINE L1 -211 7262 7182 4 1657 487 346 7 7 chrX 140535019 140535173 -26115123 - RSINE1 SINE B4 -10 155 2 4 1657 481 273 3 0 chrX 140535256 140535351 -26114945 + ID_B1 SINE B4 80 173 -51 4 1657 327 245 50 10 chrX 140535421 140535520 -26114776 - L1MB7 LINE L1 -78 6106 6004 5 1657 1319 116 9 24 chrX 140535631 140535843 -26114453 + RMER19A LTR ERVK 1 209 -528 5 1657 725 216 225 25 chrX 140536125 140536460 -26113836 - RLTR28B LTR ERVL -129 395 3 5 1657 295 289 112 17 chrX 140537184 140537300 -26112996 - B1F1 SINE Alu -20 127 1 5 1657 614 25 25 0 chrX 140537348 140537427 -26112869 + (TTTTC)n Simple_repeat Simple_repeat 2 82 0 5 1657 219 69 0 0 chrX 140537429 140537458 -26112838 + (TCCC)n Simple_repeat Simple_repeat 1 29 0 5 1657 333 274 27 30 chrX 140537824 140537935 -26112361 + PB1D7 SINE Alu 9 119 -1 5 1657 1082 50 0 7 chrX 140537936 140538078 -26112218 + (GAAA)n Simple_repeat Simple_repeat 4 144 0 5 1657 452 262 105 14 chrX 140538275 140538418 -26111878 + MER58A DNA MER1_type 35 190 -34 5 1657 495 306 88 20 chrX 140539931 140540228 -26110068 - L1M5 LINE L1 -990 5156 4840 5 1657 195 42 0 0 chrX 140540325 140540349 -26109947 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 6 1657 1085 207 53 24 chrX 140540357 140540565 -26109731 - B3 SINE B2 -2 214 1 6 1657 198 367 12 12 chrX 140540908 140540988 -26109308 - MIR3 SINE MIR -36 172 93 6 1657 302 335 86 61 chrX 140541543 140541740 -26108556 - L1ME3B LINE L1 -35 6205 6004 6 1657 329 321 0 45 chrX 140541975 140542086 -26108210 - MTE2a LTR MaLR -214 165 60 6 1657 7758 78 9 0 chrX 140542087 140543819 -26106477 + L1_Mus1 LINE L1 4820 6565 -2 6 1657 231 286 57 0 chrX 140543863 140543933 -26106363 - MTE2a LTR MaLR -305 74 1 6 1657 321 197 92 0 chrX 140544022 140544098 -26106198 - L1MA5 LINE L1 -344 5956 5874 6 1657 575 285 0 0 chrX 140544236 140544366 -26105930 + ID_B1 SINE B4 84 213 -11 6 1657 454 282 41 27 chrX 140544366 140544381 -26105915 + B1F SINE Alu 3 149 0 6 1657 1056 240 18 0 chrX 140544450 140544675 -26105621 + Lx6 LINE L1 7063 7291 -169 6 1657 293 319 29 22 chrX 140544767 140544905 -26105391 + Lx7 LINE L1 7209 7347 -349 7 1657 51 51 0 0 chrX 140545052 140545131 -26105165 + AT_rich Low_complexity Low_complexity 1 79 0 7 1657 676 325 53 43 chrX 140545476 140545750 -26104546 + B4 SINE B4 11 280 -12 7 1657 378 0 0 0 chrX 140545756 140545798 -26104498 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1657 1146 144 54 26 chrX 140546516 140546796 -26103500 + ORR1C1 LTR MaLR 1 293 -81 7 1657 2908 267 54 33 chrX 140546796 140547688 -26102608 + RMER1C Other Other 360 1135 -207 7 1657 355 259 15 121 chrX 140547688 140547820 -26102476 + MT2B LTR ERVL 147 264 -337 7 1657 1017 99 0 21 chrX 140547714 140547858 -26102438 + B1_Mus1 SINE Alu 8 148 0 7 1657 398 227 137 50 chrX 140547874 140548013 -26102283 + RMER1C Other Other 1180 1330 -12 7 1657 1331 161 62 4 chrX 140548026 140548269 -26102027 + ORR1C1 LTR MaLR 122 378 0 7 1657 6692 192 120 12 chrX 140548269 140549631 -26100665 + ORR1C1-int LTR MaLR 1 1509 0 7 1657 422 152 0 0 chrX 140549631 140549697 -26100599 + ORR1C1 LTR MaLR 1 66 -318 7 1657 252 310 116 24 chrX 140549866 140550025 -26100271 - MIRm SINE MIR -67 201 25 7 1657 11770 22 1 5 chrX 140550386 140552354 -26097942 + L1Md_A LINE L1 1 1344 -5380 8 1657 10853 2 0 0 chrX 140555333 140556596 -26093700 + L1Md_A LINE L1 4324 5586 -297 8 1657 8982 7 0 0 chrX 140556596 140557592 -26092704 + L1Md_A LINE L1 5587 6582 0 8 1657 22 35 0 0 chrX 140557608 140557637 -26092659 + AT_rich Low_complexity Low_complexity 1 29 0 8 1657 5491 130 11 17 chrX 140558432 140559314 -26090982 - Lx4A LINE L1 0 7058 6182 8 1657 492 81 0 0 chrX 140559314 140559388 -26090908 - L1_Mur2 LINE L1 -1212 4665 4592 8 1657 231 61 0 0 chrX 140560297 140560330 -26089966 + (CA)n Simple_repeat Simple_repeat 1 33 0 8 1657 467 256 25 25 chrX 140560339 140560459 -26089837 - RSINE1 SINE B4 -44 121 2 8 1657 879 175 0 0 chrX 140561233 140561376 -26088920 - B1_Mur4 SINE Alu -2 148 6 8 1657 1228 74 5 50 chrX 140561422 140561629 -26088667 - L1Md_F3 LINE L1 0 6584 6381 8 1657 201 69 0 0 chrX 140561629 140561649 -26088647 + (T)n Simple_repeat Simple_repeat 1 20 0 8 1657 21529 51 4 60 chrX 140561668 140563297 -26086999 - L1Md_A LINE L1 0 6582 5033 9 1657 2309 75 119 11 chrX 140563297 140563649 -26086647 - RLTR10 LTR ERVK 0 390 1 9 1657 21529 127 10 155 chrX 140563649 140564473 -26085823 - L1Md_A LINE L1 -851 5032 4940 9 1657 5648 100 20 44 chrX 140564473 140565354 -26084942 - Lx LINE L1 -6 6648 5789 9 1657 21529 136 12 134 chrX 140565354 140570176 -26080120 - L1Md_A LINE L1 -944 4939 308 9 1657 7205 62 4 29 chrX 140571822 140572905 -26077391 - L1_Mus2 LINE L1 0 6566 5505 9 1657 300 319 11 11 chrX 140573381 140573476 -26076820 - RMER30 DNA MER1_type -103 99 5 9 1657 2913 205 63 2 chrX 140573529 140574165 -26076131 - Lx5 LINE L1 -8 7042 6368 9 1657 2055 316 109 24 chrX 140574211 140575305 -26074991 - Lx8 LINE L1 -122 7351 6165 9 1657 255 79 0 0 chrX 140575332 140575370 -26074926 + (TAAAAA)n Simple_repeat Simple_repeat 5 42 0 9 1657 239 288 6 0 chrX 140575399 140575476 -26074820 - Lx8 LINE L1 -1307 6166 6088 9 1657 4699 196 102 30 chrX 140575476 140576489 -26073807 + ORR1D1-int LTR MaLR 274 1359 -11 9 1657 344 232 10 0 chrX 140576525 140576624 -26073672 + CT-rich Low_complexity Low_complexity 2 101 0 9 1657 848 232 25 20 chrX 140576624 140576822 -26073474 + ORR1D1 LTR MaLR 166 364 -10 9 1657 205 200 0 0 chrX 140576823 140576863 -26073433 + T-rich Low_complexity Low_complexity 1 40 0 1 1657 11574 22 1 0 chrX 140576958 140578368 -26071928 + L1Md_T LINE L1 4176 5586 -297 1 1657 8395 34 1 0 chrX 140578368 140579361 -26070935 + L1Md_T LINE L1 5587 6580 -2 1 1657 235 265 35 35 chrX 140579620 140579706 -26070590 - MLT1A1 LTR MaLR -1 407 322 1 1657 689 218 75 0 chrX 140580498 140580631 -26069665 + B1_Mur2 SINE Alu 1 143 -6 1 1657 223 241 16 49 chrX 140581339 140581400 -26068896 + MIRb SINE MIR 8 66 -202 1 1657 192 77 0 0 chrX 140581540 140581566 -26068730 + (GA)n Simple_repeat Simple_repeat 1 26 0 1 1657 184 313 140 10 chrX 140581599 140581699 -26068597 + L2b LINE L2 3051 3163 -212 1 1657 2239 58 3 20 chrX 140582148 140582445 -26067851 - L1_Mus2 LINE L1 0 6566 6275 1 1657 4413 67 4 0 chrX 140582484 140583040 -26067256 - L1_Mus1 LINE L1 0 6567 6010 1 1657 505 266 105 0 chrX 140584276 140584400 -26065896 - B1F SINE Alu 0 149 13 1 1657 607 266 0 27 chrX 140584436 140584583 -26065713 + B1F2 SINE Alu 1 143 -6 1 1657 201 74 0 0 chrX 140584680 140584707 -26065589 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1657 369 185 31 150 chrX 140585071 140585190 -26065106 + B1F1 SINE Alu 3 108 -41 1 1657 342 0 0 0 chrX 140585190 140585228 -26065068 + (GA)n Simple_repeat Simple_repeat 2 39 0 1 1657 794 80 3 80 chrX 140585235 140585563 -26064733 + G-rich Low_complexity Low_complexity 1 302 0 1 1657 306 0 0 0 chrX 140585674 140585708 -26064588 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1 1657 312 27 0 0 chrX 140585708 140585744 -26064552 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1657 634 152 0 28 chrX 140585744 140585852 -26064444 - RMER17C LTR ERVK -21 389 285 1 1657 1912 251 9 35 chrX 140586256 140586787 -26063509 + Lx6 LINE L1 6559 7434 -26 1 1657 201 171 0 0 chrX 140586787 140586822 -26063474 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1 1657 255 260 52 52 chrX 140586848 140586925 -26063371 - ID2 SINE ID -5 78 2 1 1657 212 200 0 0 chrX 140587154 140587189 -26063107 + PB1D10 SINE Alu 47 81 -36 1 1657 266 160 39 20 chrX 140587259 140587310 -26062986 - Charlie4z DNA MER1_type 0 167 116 1 1657 2295 61 3 3 chrX 140587584 140587880 -26062416 - L1_Mus1 LINE L1 -1 6566 6271 1 1657 318 50 0 0 chrX 140589029 140589069 -26061227 + (TTGG)n Simple_repeat Simple_repeat 1 40 0 1 1657 244 300 0 0 chrX 140589237 140589307 -26060989 + L2a LINE L2 3354 3423 -3 1 1657 303 267 16 70 chrX 140589682 140589811 -26060485 + CT-rich Low_complexity Low_complexity 3 124 0 1 1657 209 210 15 61 chrX 140589872 140589938 -26060358 + T-rich Low_complexity Low_complexity 2 64 0 1 1657 699 269 81 42 chrX 140590935 140591218 -26059078 + MER2 DNA MER2_type 3 296 -49 1 1657 405 39 0 0 chrX 140591861 140591912 -26058384 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1657 186 118 0 0 chrX 140591913 140591947 -26058349 + (TCTG)n Simple_repeat Simple_repeat 1 34 0 1 1657 276 306 20 20 chrX 140591984 140592134 -26058162 - L1MA4 LINE L1 -382 5918 5769 1 1657 413 299 70 8 chrX 140592646 140592774 -26057522 - ID_B1 SINE B4 -10 214 79 1 1657 283 314 28 19 chrX 140592947 140593054 -26057242 + MER5B DNA MER1_type 3 110 -68 1 1657 219 358 24 32 chrX 140593143 140593267 -26057029 - MER5A DNA MER1_type -22 167 45 1 1657 235 336 33 74 chrX 140593158 140593280 -26057016 + MER5A DNA MER1_type 49 165 -24 1 1657 4945 99 48 11 chrX 140593419 140594173 -26056123 - RLTR13C2 LTR ERVK -26 782 1 1 1657 671 215 0 12 chrX 140594195 140594335 -26055961 + B1F2 SINE Alu 9 140 -9 1 1657 864 221 189 11 chrX 140594386 140594656 -26055640 - MLT1C LTR MaLR -106 361 44 1 1657 635 275 14 23 chrX 140594659 140594875 -26055421 + Lx7 LINE L1 7095 7308 -388 1 1657 450 0 0 0 chrX 140594883 140594933 -26055363 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1657 227 227 26 26 chrX 140594934 140595011 -26055285 + T-rich Low_complexity Low_complexity 4 80 0 1 1657 450 279 0 9 chrX 140595970 140596075 -26054221 + MER5B DNA MER1_type 1 104 -74 1 1657 221 274 58 23 chrX 140596094 140596180 -26054116 + MER5A DNA MER1_type 100 188 -1 1 1657 261 83 0 0 chrX 140596491 140596527 -26053769 + (TCC)n Simple_repeat Simple_repeat 3 38 0 1 1657 23 0 0 0 chrX 140598684 140598707 -26051589 + AT_rich Low_complexity Low_complexity 1 23 0 1 1657 246 62 0 0 chrX 140598823 140598855 -26051441 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1657 498 114 0 0 chrX 140600994 140601073 -26049223 + (CA)n Simple_repeat Simple_repeat 1 79 0 1 1657 1507 62 16 0 chrX 140601093 140601285 -26049011 - B2_Mm2 SINE B2 0 195 1 1 1657 831 230 45 10 chrX 140601317 140601519 -26048777 - B3 SINE B2 -5 211 3 1 1657 627 297 9 37 chrX 140601864 140602081 -26048215 - ID_B1 SINE B4 -13 211 1 1 1657 246 391 33 0 chrX 140602561 140602653 -26047643 + MLT1J-int LTR MaLR 811 905 -482 1 1657 433 274 128 26 chrX 140602825 140603020 -26047276 + ID_B1 SINE B4 2 216 -8 1 1657 231 36 0 0 chrX 140603151 140603179 -26047117 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 1 1657 182 395 18 18 chrX 140603186 140603297 -26046999 - L2 LINE L2 -608 2811 2701 1 1657 278 362 55 0 chrX 140603385 140603512 -26046784 - L2 LINE L2 -924 2495 2362 1 1657 633 237 45 8 chrX 140603794 140603926 -26046370 + B4A SINE B4 4 140 -152 1 1657 537 227 39 0 chrX 140603959 140604087 -26046209 + Lx9 LINE L1 7055 7187 -457 1 1657 751 71 0 0 chrX 140604105 140604204 -26046092 + B1_Mm SINE Alu 8 106 -41 1 1657 242 214 26 162 chrX 140604143 140604260 -26046036 + RLTR25A LTR ERVK 522 622 -481 1 1657 444 243 9 26 chrX 140604204 140604219 -26046077 + ID_B1 SINE B4 89 200 -24 1 1657 351 229 272 48 chrX 140604266 140604527 -26045769 + Lx9 LINE L1 7322 7641 -3 1 1657 6247 158 26 43 chrX 140604599 140605827 -26044469 + Lx2 LINE L1 5789 6995 -2 1 1657 2359 87 21 0 chrX 140605855 140606187 -26044109 + L1_Mus4 LINE L1 6287 6625 -11 1 1657 2910 146 23 0 chrX 140606206 140606693 -26043603 + Lx2 LINE L1 6354 6851 -146 1 1657 555 313 33 0 chrX 140606693 140606843 -26043453 + B3A SINE B2 28 182 -16 1 1657 291 300 30 38 chrX 140606952 140607095 -26043201 - MIRb SINE MIR -88 180 34 1 1657 810 176 100 6 chrX 140607161 140607321 -26042975 + B2_Mm2 SINE B2 2 176 -19 1 1657 307 313 18 12 chrX 140607364 140607532 -26042764 + (TA)n Simple_repeat Simple_repeat 2 170 0 1 1657 294 220 21 52 chrX 140607880 140607976 -26042320 + (TATATG)n Simple_repeat Simple_repeat 2 94 0 1 1657 189 0 0 0 chrX 140608163 140608184 -26042112 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 1657 1100 242 106 74 chrX 140608217 140608556 -26041740 - MTD LTR MaLR -68 351 2 1 1657 2206 137 111 3 chrX 140608633 140608915 -26041381 - MTC LTR MaLR 0 421 119 1 1657 180 0 0 0 chrX 140608915 140608935 -26041361 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1657 2206 137 111 3 chrX 140608935 140609032 -26041264 - MTC LTR MaLR -303 118 1 1 1657 239 365 0 0 chrX 140609085 140609159 -26041137 + MER110A LTR ERV1 268 341 -127 1 1657 1663 130 82 18 chrX 140609798 140610080 -26040216 + ORR1B2 LTR MaLR 1 300 -67 1 1657 345 190 0 0 chrX 140610079 140610137 -26040159 - B3A SINE B2 -59 139 82 1 1657 542 277 108 0 chrX 140610578 140610726 -26039570 - ID_B1 SINE B4 -54 170 7 1 1657 212 222 0 31 chrX 140610824 140610889 -26039407 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 1 1657 274 200 0 0 chrX 140610936 140610986 -26039310 - Lx9 LINE L1 -251 7393 7344 1 1657 27 49 0 0 chrX 140611048 140611089 -26039207 + AT_rich Low_complexity Low_complexity 1 41 0 1 1657 267 353 35 23 chrX 140611125 140611212 -26039084 - RSINE1 SINE B4 -74 91 4 1 1657 564 187 21 47 chrX 140611356 140611547 -26038749 - RMER17C LTR ERVK -133 277 92 1 1657 314 165 40 20 chrX 140611604 140611703 -26038593 + MER33 DNA MER1_type 120 220 -104 1 1657 394 261 57 0 chrX 140611840 140611928 -26038368 + ID_B1 SINE B4 91 183 -41 1 1657 385 68 0 0 chrX 140612096 140612155 -26038141 - Lx3_Mus LINE L1 -1 7008 6950 1 1657 881 122 0 0 chrX 140612156 140612279 -26038017 - B1_Mur4 SINE Alu -27 123 1 1 1657 434 245 0 0 chrX 140612946 140612965 -26037331 + ID_B1 SINE B4 121 139 -85 1 1657 1257 90 0 0 chrX 140612965 140613142 -26037154 + (GAGAA)n Simple_repeat Simple_repeat 1 177 0 1 1657 434 245 0 0 chrX 140613142 140613224 -26037072 + ID_B1 SINE B4 140 221 -3 1 1657 761 269 46 0 chrX 140613494 140613691 -26036605 + B3 SINE B2 1 206 -10 1 1657 240 211 0 0 chrX 140613992 140614044 -26036252 + (TTG)n Simple_repeat Simple_repeat 1 52 0 1 1657 233 297 0 10 chrX 140614044 140614132 -26036164 - ID4_ SINE ID -50 102 17 1 1657 329 283 20 20 chrX 140614128 140614229 -26036067 - PB1D10 SINE Alu -11 106 6 1 1657 399 276 19 124 chrX 140614487 140614648 -26035648 + B1F SINE Alu 1 144 -5 1 1657 358 321 14 28 chrX 140614704 140614848 -26035448 + B1F2 SINE Alu 3 144 -5 1 1657 288 281 120 33 chrX 140616115 140616207 -26034089 + ID_B1 SINE B4 2 101 -123 1 1657 1819 191 93 5 chrX 140616207 140616283 -26034013 - MTD LTR MaLR 0 419 334 1 1657 1033 49 7 20 chrX 140616283 140616429 -26033867 - L1Md_F2 LINE L1 -12 6570 6427 1 1657 1819 191 93 5 chrX 140616429 140616737 -26033559 - MTD LTR MaLR -86 333 1 1 1657 313 276 202 58 chrX 140616737 140616837 -26033459 + ID_B1 SINE B4 101 215 -9 1 1657 686 241 21 0 chrX 140616845 140616990 -26033306 + B1_Mur1 SINE Alu 2 149 0 1 1657 231 146 0 0 chrX 140617037 140617078 -26033218 + (TCTCCC)n Simple_repeat Simple_repeat 3 43 0 1 1657 423 374 89 22 chrX 140617078 140617349 -26032947 + L2 LINE L2 2575 2863 -556 1 1657 2530 223 53 24 chrX 140617372 140617959 -26032337 - RLTR18 LTR ERVK -11 605 2 1 1657 274 326 95 0 chrX 140618151 140618246 -26032050 + PB1D10 SINE Alu 9 112 -5 1 1657 569 324 58 5 chrX 140618292 140618497 -26031799 + MER89 LTR ERV1 132 347 -212 1 1657 555 296 104 23 chrX 140618990 140619006 -26031290 - B3A SINE B2 -11 187 173 2 1657 204 125 0 0 chrX 140619006 140619038 -26031258 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1657 555 296 104 23 chrX 140619038 140619194 -26031102 - B3A SINE B2 -26 172 1 2 1657 825 236 102 10 chrX 140619366 140619666 -26030630 + MTD LTR MaLR 18 405 -14 2 1657 344 22 22 0 chrX 140619733 140619778 -26030518 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1657 360 221 0 13 chrX 140619882 140619960 -26030336 - ID4_ SINE ID -2 81 5 2 1657 266 329 82 84 chrX 140619963 140620318 -26029978 + MER110A LTR ERV1 81 434 -34 2 1657 716 263 36 40 chrX 140620399 140620621 -26029675 - RMER15 LTR ERVL -15 560 340 2 1657 619 281 14 0 chrX 140620933 140621072 -26029224 - B1_Mur2 SINE Alu -8 141 1 2 1657 688 269 107 126 chrX 140621182 140621564 -26028732 + MTE2b LTR MaLR 1 375 -4 2 1657 227 279 38 0 chrX 140621620 140621699 -26028597 + CT-rich Low_complexity Low_complexity 1 82 0 2 1657 220 53 53 0 chrX 140621702 140621740 -26028556 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1657 191 297 182 56 chrX 140622406 140622620 -26027676 - L2 LINE L2 -1215 2204 1964 2 1657 345 47 0 0 chrX 140622993 140623036 -26027260 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1657 1560 263 25 14 chrX 140623065 140623211 -26027085 + ORR1D2 LTR MaLR 3 148 -222 2 1657 844 186 37 21 chrX 140623211 140623398 -26026898 + B2_Mm2 SINE B2 3 192 -3 2 1657 1560 263 25 14 chrX 140623398 140623606 -26026690 + ORR1D2 LTR MaLR 149 361 -9 2 1657 382 304 65 48 chrX 140623653 140624009 -26026287 - L1MD2 LINE L1 -144 6215 5854 2 1657 477 311 0 165 chrX 140624009 140624221 -26026075 + MTE2b LTR MaLR 1 177 -202 2 1657 425 333 65 13 chrX 140624226 140624381 -26025915 + RSINE1 SINE B4 3 165 0 2 1657 1092 233 10 0 chrX 140624544 140624746 -26025550 - B3 SINE B2 -6 210 7 2 1657 248 140 0 39 chrX 140624958 140625010 -26025286 + Lx4B LINE L1 7002 7051 -7 2 1657 1438 274 52 20 chrX 140625032 140625531 -26024765 - Lx8 LINE L1 -253 7220 6706 2 1657 729 281 86 62 chrX 140625593 140625812 -26024484 - L1MB4 LINE L1 -158 6022 5803 2 1657 1222 105 5 22 chrX 140625812 140625997 -26024299 + B2_Mm2 SINE B2 1 182 -13 2 1657 729 281 86 62 chrX 140625997 140626210 -26024086 - L1MB4 LINE L1 -378 5802 5580 2 1657 420 20 0 0 chrX 140626212 140626261 -26024035 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 1657 216 0 0 0 chrX 140626261 140626285 -26024011 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1657 367 142 22 56 chrX 140626290 140626469 -26023827 + (TCTG)n Simple_repeat Simple_repeat 2 174 0 2 1657 824 141 6 0 chrX 140626456 140626633 -26023663 + (TC)n Simple_repeat Simple_repeat 1 178 0 2 1657 7238 100 2 2 chrX 140626806 140627862 -26022434 + Lx2 LINE L1 5587 6642 -355 2 1657 1049 131 56 0 chrX 140627865 140628063 -26022233 + Lx2 LINE L1 6777 6985 -12 2 1657 263 242 88 36 chrX 140629454 140629591 -26020705 + L1ME2z LINE L1 6295 6438 -6 2 1657 369 164 0 0 chrX 140629785 140629858 -26020438 + (CAT)n Simple_repeat Simple_repeat 3 75 0 2 1657 627 305 42 18 chrX 140629905 140630122 -26020174 + ID_B1 SINE B4 3 224 0 2 1657 2948 103 54 15 chrX 140630366 140630829 -26019467 + L1_Mus4 LINE L1 6156 6636 0 2 1657 324 321 45 18 chrX 140630829 140630940 -26019356 + L2a LINE L2 3313 3426 0 2 1657 875 328 21 85 chrX 140631033 140631410 -26018886 + MLT1A LTR MaLR 22 374 0 2 1657 7127 152 34 13 chrX 140631809 140633302 -26016994 + Lx3C LINE L1 5437 6974 -2 2 1657 42 0 0 0 chrX 140633432 140633474 -26016822 + AT_rich Low_complexity Low_complexity 1 42 0 2 1657 271 333 13 0 chrX 140633849 140633927 -26016369 - ID4 SINE ID -1 82 4 2 1657 588 14 0 0 chrX 140634160 140634229 -26016067 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 2 1657 467 338 13 19 chrX 140634669 140634823 -26015473 + ID_B1 SINE B4 70 222 -2 2 1657 201 167 0 0 chrX 140635066 140635102 -26015194 + (TAA)n Simple_repeat Simple_repeat 2 37 0 2 1657 936 57 0 0 chrX 140635566 140635688 -26014608 + B1_Mm SINE Alu 26 147 0 2 1657 202 169 111 63 chrX 140635831 140635894 -26014402 + L2 LINE L2 2399 2464 -955 2 1657 238 231 14 58 chrX 140636067 140636136 -26014160 + MamGypLTR1c LTR Gypsy 729 794 -9 2 1657 752 273 14 9 chrX 140636167 140636378 -26013918 + B3 SINE B2 5 216 0 2 1657 1254 99 11 0 chrX 140636476 140636658 -26013638 - B2_Mm1t SINE B2 -7 186 3 2 1657 758 270 6 11 chrX 140637200 140637380 -26012916 + B3A SINE B2 1 179 -19 2 1657 593 213 76 87 chrX 140637432 140637617 -26012679 + B3A SINE B2 1 183 -15 2 1657 473 283 27 27 chrX 140637665 140637814 -26012482 + B1_Mur1 SINE Alu 1 149 0 2 1657 1386 71 22 0 chrX 140638185 140638367 -26011929 + B2_Mm2 SINE B2 2 187 -8 2 1657 526 278 109 18 chrX 140638428 140638581 -26011715 + B3 SINE B2 37 204 -12 2 1657 2115 176 8 13 chrX 140638581 140638962 -26011334 + RLTR14 LTR ERV1 4 382 0 2 1657 526 278 109 18 chrX 140638962 140638973 -26011323 + B3 SINE B2 205 215 -1 2 1657 4355 53 0 0 chrX 140639031 140639560 -26010736 + L1_Mus1 LINE L1 6039 6567 0 2 1657 385 307 41 48 chrX 140640156 140640171 -26010125 + ID_B1 SINE B4 78 218 -1 2 207 555 262 0 8 chrX 140640171 140640298 -26009998 + B1_Mur2 SINE Alu 18 143 -6 2 1658 1297 106 16 0 chrX 140641292 140641481 -26008815 + B2_Mm2 SINE B2 1 192 -3 2 1658 279 0 0 0 chrX 140643232 140643263 -26007033 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1658 393 102 0 0 chrX 140643263 140643322 -26006974 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 1658 7287 101 5 0 chrX 140643556 140644641 -26005655 + L1_Mm LINE L1 4792 5881 -2 2 1658 7391 61 2 3 chrX 140644652 140645832 -26004464 + L1_Mus1 LINE L1 5388 6566 -1 2 1658 364 290 39 39 chrX 140645832 140645936 -26004360 - B1F2 SINE Alu -13 136 33 2 1658 3028 63 18 5 chrX 140646658 140647059 -26003237 - L1Md_F2 LINE L1 -3 6579 6174 2 1658 1589 71 0 5 chrX 140647059 140647272 -26003024 + L1_Mm LINE L1 5520 5731 -152 2 1658 2681 196 18 6 chrX 140647297 140647799 -26002497 - RMER5 LTR ERV1 -26 508 1 2 1658 263 372 25 0 chrX 140648259 140648380 -26001916 + B1F2 SINE Alu 19 142 -7 2 1658 267 323 94 8 chrX 140648474 140648602 -26001694 - MLT1A1 LTR MaLR -27 381 243 2 1658 802 165 6 6 chrX 140649195 140649366 -26000930 + CT-rich Low_complexity Low_complexity 1 171 0 2 1658 340 322 99 57 chrX 140649971 140650182 -26000114 - Lx9 LINE L1 -453 7191 6972 2 1658 593 131 9 0 chrX 140650344 140650451 -25999845 + (TAGA)n Simple_repeat Simple_repeat 1 108 0 2 1658 355 130 40 10 chrX 140650463 140650564 -25999732 + (TATG)n Simple_repeat Simple_repeat 4 107 0 2 1658 1034 290 0 7 chrX 140650571 140650876 -25999420 - Lx9 LINE L1 -706 6938 6636 2 1658 23 68 0 0 chrX 140651277 140651321 -25998975 + AT_rich Low_complexity Low_complexity 1 44 0 2 1658 453 296 11 32 chrX 140651322 140651507 -25998789 - B3A SINE B2 -16 182 2 2 1658 334 90 319 26 chrX 140651522 140651635 -25998661 - B2_Mm2 SINE B2 -3 192 47 2 1658 1100 106 0 0 chrX 140651682 140651833 -25998463 - B2_Mm2 SINE B2 -44 151 1 2 1658 244 172 88 59 chrX 140652023 140652091 -25998205 + RLTR25A LTR ERVK 507 576 -527 2 1658 245 182 0 98 chrX 140652039 140652100 -25998196 + MT2B LTR ERVL 210 264 -337 2 1658 725 45 0 0 chrX 140652047 140652135 -25998161 + B1_Mur4 SINE Alu 63 150 0 2 1658 36 40 0 0 chrX 140652135 140652185 -25998111 + AT_rich Low_complexity Low_complexity 1 50 0 2 1658 29 60 0 0 chrX 140652286 140652336 -25997960 + AT_rich Low_complexity Low_complexity 1 50 0 2 1658 36 23 0 0 chrX 140653128 140653171 -25997125 + AT_rich Low_complexity Low_complexity 1 43 0 2 1658 330 308 0 0 chrX 140653215 140653306 -25996990 + PB1D10 SINE Alu 27 117 0 2 1658 4646 97 27 6 chrX 140653428 140654208 -25996088 - MusHAL1 LINE L1 -1772 940 145 2 1658 878 104 0 0 chrX 140654260 140654385 -25995911 + B1_Mus1 SINE Alu 24 148 0 2 1658 575 265 26 0 chrX 140654414 140654531 -25995765 + ID_B1 SINE B4 93 212 -12 2 1658 395 300 45 30 chrX 140654531 140654548 -25995748 + B1F2 SINE Alu 12 147 -2 2 1658 603 265 48 10 chrX 140654564 140654737 -25995559 + B3A SINE B2 36 211 -5 2 1658 487 329 7 0 chrX 140655160 140655306 -25994990 - B1F1 SINE Alu -1 148 2 2 1658 875 96 15 0 chrX 140655415 140655551 -25994745 - Lx2A LINE L1 0 7008 6871 2 1658 343 336 0 0 chrX 140655585 140655689 -25994607 - ID_B1 SINE B4 -7 217 114 2 1658 295 261 78 0 chrX 140655707 140655822 -25994474 - L1M3 LINE L1 -1784 4359 4236 2 1658 301 282 0 0 chrX 140655930 140656015 -25994281 - L1M3 LINE L1 -1910 4230 4146 2 1658 1293 101 16 5 chrX 140656139 140656328 -25993968 - B2_Mm2 SINE B2 -4 191 1 2 1658 229 191 0 0 chrX 140656443 140656490 -25993806 + (CATTT)n Simple_repeat Simple_repeat 3 49 0 2 1658 806 289 33 8 chrX 140656527 140656768 -25993528 - RMER5 LTR ERV1 0 534 288 2 1658 36311 29 0 0 chrX 140656787 140663018 -25987278 - L1Md_T LINE L1 0 6585 259 2 1658 627 264 54 25 chrX 140663018 140663259 -25987037 - RMER5 LTR ERV1 -242 292 45 2 1658 453 281 39 0 chrX 140663318 140663471 -25986825 - L1M3 LINE L1 -2364 3776 3618 2 1658 259 218 126 19 chrX 140663485 140663588 -25986708 + MER112 DNA MER1_type 61 174 -87 2 1658 423 0 0 0 chrX 140663613 140663660 -25986636 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 1658 363 44 0 0 chrX 140663660 140663704 -25986592 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1658 591 314 112 6 chrX 140663763 140663933 -25986363 + ID_B1 SINE B4 2 189 -35 2 1658 5569 70 1 0 chrX 140664173 140664884 -25985412 + L1_Mus1 LINE L1 5855 6566 -1 2 1658 768 265 0 62 chrX 140664895 140665072 -25985224 + B3 SINE B2 48 213 -3 2 1658 232 227 71 57 chrX 140665273 140665343 -25984953 + L2a LINE L2 3341 3411 -15 2 1658 1108 98 0 0 chrX 140665346 140665489 -25984807 + B1_Mus1 SINE Alu 2 144 -4 3 1658 855 102 0 0 chrX 140666476 140666604 -25983692 + (CATA)n Simple_repeat Simple_repeat 1 128 0 3 1658 1134 171 13 31 chrX 140666654 140666883 -25983413 - URR1B DNA MER1_type 0 225 1 3 1658 722 295 96 10 chrX 140668393 140668587 -25981709 + B4A SINE B4 5 216 -76 3 1658 731 210 65 0 chrX 140668587 140668725 -25981571 + B1_Mur4 SINE Alu 4 150 0 3 1658 233 259 86 0 chrX 140668744 140668802 -25981494 + B4A SINE B4 210 272 -20 3 1658 201 250 0 20 chrX 140668891 140668940 -25981356 + (CAGA)n Simple_repeat Simple_repeat 1 48 0 3 1658 36 40 0 0 chrX 140669435 140669485 -25980811 + AT_rich Low_complexity Low_complexity 1 50 0 3 1658 357 75 0 0 chrX 140669506 140669559 -25980737 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1658 985 256 23 9 chrX 140669630 140669847 -25980449 - ID_B1 SINE B4 -1 223 4 3 1658 631 249 203 17 chrX 140669905 140670146 -25980150 - MTEa LTR MaLR -1 378 93 3 1658 818 267 35 39 chrX 140670166 140670423 -25979873 + Lx6 LINE L1 7189 7444 -16 3 1658 1430 87 11 0 chrX 140671823 140672008 -25978288 - B2_Mm1t SINE B2 -6 187 1 3 1658 522 252 8 22 chrX 140672805 140672939 -25977357 - MTEa LTR MaLR -241 138 7 3 1658 2265 294 73 16 chrX 140672945 140673081 -25977215 - MTEa-int LTR MaLR 0 1580 1432 3 1658 1302 85 85 0 chrX 140673081 140673257 -25977039 - B2_Mm2 SINE B2 -4 191 1 3 1658 2265 294 73 16 chrX 140673257 140673856 -25976440 - MTEa-int LTR MaLR -149 1431 804 3 1658 1139 84 7 0 chrX 140674043 140674198 -25976098 + B2_Mm1a SINE B2 3 158 -35 3 1658 342 0 0 0 chrX 140674198 140674236 -25976060 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 3 1658 189 107 0 0 chrX 140674264 140674292 -25976004 + (CATATA)n Simple_repeat Simple_repeat 3 30 0 3 1658 1031 128 127 6 chrX 140674481 140674646 -25975650 + B2_Mm2 SINE B2 1 185 -10 3 1658 336 159 101 0 chrX 140674721 140674790 -25975506 - HAL1-3A_ME LINE L1 -795 2063 1988 3 1658 329 265 76 117 chrX 140674794 140674965 -25975331 - RSINE1 SINE B4 0 165 2 3 1658 996 188 98 10 chrX 140675019 140675213 -25975083 + B3 SINE B2 1 211 -5 3 1658 393 291 45 80 chrX 140675242 140675466 -25974830 - L1M4 LINE L1 -1073 5073 4858 3 1658 438 20 0 0 chrX 140675596 140675647 -25974649 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1658 337 359 48 0 chrX 140675737 140675882 -25974414 + Lx8 LINE L1 7130 7281 -192 3 1658 1238 49 14 0 chrX 140675995 140676139 -25974157 - B1_Mm SINE Alu 0 147 2 3 1658 400 294 45 137 chrX 140676173 140676324 -25973972 - L1M4 LINE L1 -1306 4840 4689 3 1658 1280 119 0 31 chrX 140676324 140676515 -25973781 + B2_Mm2 SINE B2 2 186 -9 3 1658 400 294 45 137 chrX 140676515 140676742 -25973554 - L1M4 LINE L1 -1458 4688 4497 3 1658 750 23 0 0 chrX 140676780 140676868 -25973428 + (TTC)n Simple_repeat Simple_repeat 2 89 0 3 1658 1226 83 0 0 chrX 140676868 140677013 -25973283 - B1_Mus2 SINE Alu -2 145 1 3 1658 284 343 0 10 chrX 140677096 140677199 -25973097 - L1M4 LINE L1 -1982 4164 4063 3 1658 439 288 67 15 chrX 140677200 140677334 -25972962 - MLT1A1 LTR MaLR 0 408 268 3 1658 3503 158 58 0 chrX 140677443 140678077 -25972219 + L1_Mur2 LINE L1 4778 5448 -429 3 1658 1618 27 49 0 chrX 140678103 140678287 -25972009 + B2_Mm1a SINE B2 1 193 0 3 1658 247 203 29 14 chrX 140678589 140678659 -25971637 + (TA)n Simple_repeat Simple_repeat 2 72 0 3 1658 2911 135 0 7 chrX 140678671 140679110 -25971186 + L1_Mur2 LINE L1 5435 5870 -7 3 1658 2389 202 90 2 chrX 140679115 140679626 -25970670 + Lx5 LINE L1 6495 7050 0 3 1658 289 317 90 18 chrX 140679631 140679798 -25970498 - MLT1A1 LTR MaLR -229 179 1 3 1658 641 190 124 0 chrX 140679880 140680001 -25970295 + B1_Mur4 SINE Alu 2 137 -13 3 1658 660 13 0 0 chrX 140680016 140680093 -25970203 + (GAAAA)n Simple_repeat Simple_repeat 4 80 0 3 1658 258 105 0 0 chrX 140680129 140680167 -25970129 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 3 1658 272 320 0 37 chrX 140680320 140680427 -25969869 - PB1 SINE Alu -2 125 23 3 1658 316 254 0 0 chrX 140680641 140680696 -25969600 + ID4_ SINE ID 20 74 -9 3 1658 310 321 129 0 chrX 140680739 140680879 -25969417 - Tigger7 DNA MER2_type -6 2485 2328 3 1658 388 126 316 26 chrX 140680947 140681061 -25969235 - B2_Mm2 SINE B2 -2 193 47 3 1658 1394 63 34 11 chrX 140681174 140681350 -25968946 - B2_Mm2 SINE B2 -14 181 2 3 1658 310 344 0 0 chrX 140681361 140681457 -25968839 - B2_Mm2 SINE B2 -96 99 4 3 1658 378 298 24 88 chrX 140681457 140681570 -25968726 - PB1D10 SINE Alu -34 115 3 3 1658 1085 282 100 0 chrX 140681573 140681882 -25968414 - Tigger7 DNA MER2_type -2054 437 98 3 1658 1726 42 0 0 chrX 140681882 140682072 -25968224 + B2_Mm1t SINE B2 1 190 -3 3 1658 329 270 90 0 chrX 140682091 140682191 -25968105 + B1F1 SINE Alu 9 117 -32 3 1658 323 298 69 46 chrX 140682330 140682460 -25967836 - L1M5 LINE L1 -2478 3668 3536 3 1658 22 0 0 0 chrX 140682466 140682488 -25967808 + AT_rich Low_complexity Low_complexity 1 22 0 3 1658 788 269 39 20 chrX 140682626 140682880 -25967416 - L1MB7 LINE L1 -10 6174 5916 3 1658 2069 146 9 0 chrX 140682897 140683212 -25967084 - ORR1A3 LTR MaLR 0 326 9 3 1658 377 264 23 31 chrX 140683218 140683347 -25966949 - L1MB7 LINE L1 -279 5899 5772 3 1658 1069 176 43 22 chrX 140683622 140683854 -25966442 + Lx9 LINE L1 7402 7638 -6 3 1658 1560 55 28 0 chrX 140683891 140684073 -25966223 + B2_Mm1a SINE B2 3 189 -4 3 1658 279 329 45 90 chrX 140684076 140684253 -25966043 + B4A SINE B4 1 169 -123 3 1658 325 312 13 0 chrX 140684305 140684382 -25965914 + RSINE1 SINE B4 78 155 -10 3 1658 21 36 0 0 chrX 140684393 140684421 -25965875 + AT_rich Low_complexity Low_complexity 1 28 0 3 1658 1165 118 6 0 chrX 140684422 140684591 -25965705 + B2_Mm2 SINE B2 1 170 -25 3 1658 397 86 305 10 chrX 140684643 140684744 -25965552 + B2_Mm2 SINE B2 46 181 -14 3 1658 202 210 32 16 chrX 140684747 140684759 -25965537 + (TAAA)n Simple_repeat Simple_repeat 1 12 0 3 1658 909 143 56 14 chrX 140684759 140684901 -25965395 + B1_Mus1 SINE Alu 1 148 0 3 1658 202 210 32 16 chrX 140684901 140684951 -25965345 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 3 1658 801 104 0 39 chrX 140685031 140685161 -25965135 + ORR1B1 LTR MaLR 213 337 -57 3 1658 1324 34 0 0 chrX 140685161 140685308 -25964988 + B1_Mus2 SINE Alu 1 147 0 3 1658 1245 120 17 11 chrX 140685335 140685512 -25964784 + B2_Mm1t SINE B2 2 179 -14 3 1658 352 146 0 0 chrX 140685550 140685605 -25964691 + B2_Mm2 SINE B2 47 101 -94 3 1658 200 31 0 59 chrX 140685630 140685664 -25964632 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 3 1658 340 51 0 145 chrX 140685664 140685689 -25964607 + ORR1B1 LTR MaLR 328 352 -42 3 1658 1121 73 0 0 chrX 140685689 140685825 -25964471 + B1_Mm SINE Alu 2 137 -10 3 1658 486 0 0 0 chrX 140685825 140685879 -25964417 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 3 1658 340 51 0 145 chrX 140685879 140685921 -25964375 + ORR1B1 LTR MaLR 353 385 -9 3 1658 2492 198 94 13 chrX 140685924 140686826 -25963470 + Lx6 LINE L1 5920 6894 -566 3 1658 1441 82 0 26 chrX 140686860 140687049 -25963247 - B2_Mm2 SINE B2 -8 187 4 3 1658 1359 239 31 0 chrX 140687049 140687342 -25962954 + Lx6 LINE L1 7132 7433 -27 3 1658 1252 93 0 6 chrX 140687398 140687571 -25962725 + B2_Mm2 SINE B2 3 174 -21 3 1658 1341 20 0 0 chrX 140687571 140687718 -25962578 + B1_Mus2 SINE Alu 1 147 0 3 1658 387 0 0 0 chrX 140687718 140687761 -25962535 + (TAAAA)n Simple_repeat Simple_repeat 2 44 0 3 1658 1246 75 0 0 chrX 140687931 140688078 -25962218 + B1_Mm SINE Alu 1 147 0 3 1658 195 42 0 0 chrX 140688078 140688102 -25962194 + (GAAA)n Simple_repeat Simple_repeat 3 26 0 3 1658 672 13 0 0 chrX 140688098 140688175 -25962121 + (GAGAA)n Simple_repeat Simple_repeat 4 80 0 3 1658 1489 68 5 54 chrX 140688533 140688736 -25961560 + B2_Mm1a SINE B2 1 193 0 3 1658 276 343 87 39 chrX 140688951 140689157 -25961139 - MLT1E1A LTR MaLR -31 649 434 3 1658 473 276 77 44 chrX 140689158 140689340 -25960956 - MLT1E1A LTR MaLR -353 327 140 3 1658 441 0 0 0 chrX 140690319 140690368 -25959928 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 1658 387 0 0 0 chrX 140690716 140690759 -25959537 + (TC)n Simple_repeat Simple_repeat 1 43 0 3 1658 231 36 0 0 chrX 140690769 140690797 -25959499 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 1658 263 242 16 104 chrX 140690857 140690978 -25959318 - PB1D10 SINE Alu -1 119 10 3 1658 1189 254 84 19 chrX 140690984 140691365 -25958931 + MTD LTR MaLR 3 405 -14 3 1658 591 283 7 21 chrX 140691682 140691823 -25958473 + ID_B1 SINE B4 81 219 -5 3 1658 252 0 0 0 chrX 140691841 140691869 -25958427 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1658 1336 82 21 21 chrX 140691886 140692074 -25958222 + B2_Mm1a SINE B2 2 189 -4 3 1658 1014 161 0 0 chrX 140692176 140692325 -25957971 + B1_Mur4 SINE Alu 1 149 -1 3 1658 451 340 57 28 chrX 140692445 140692657 -25957639 - MT2A LTR ERVL -71 462 245 3 1658 238 316 104 0 chrX 140692913 140693071 -25957225 - MER34A LTR ERV1 -3 568 409 3 1658 309 82 0 0 chrX 140693149 140693198 -25957098 + (T)n Simple_repeat Simple_repeat 1 49 0 3 1658 282 267 22 55 chrX 140693393 140693484 -25956812 - MER34A LTR ERV1 -441 130 43 3 1658 788 110 178 0 chrX 140693542 140693660 -25956636 + B1_Mus1 SINE Alu 2 140 -8 3 1658 266 200 50 0 chrX 140693769 140693829 -25956467 + MER110 LTR ERV1 3 65 -426 3 1658 286 83 0 0 chrX 140693825 140693861 -25956435 - ID_B1 SINE B4 -6 218 183 3 1658 249 204 93 0 chrX 140693861 140693879 -25956417 - PB1D10 SINE Alu -6 111 53 3 1658 2671 112 2 40 chrX 140693976 140694375 -25955921 - L1_Mus4 LINE L1 -3 6633 6250 3 1658 994 85 0 0 chrX 140694375 140694504 -25955792 + L1_Mus4 LINE L1 6098 6226 -412 3 1658 355 299 155 45 chrX 140694702 140694947 -25955349 + MER110 LTR ERV1 171 442 -49 3 1658 1242 42 7 0 chrX 140695365 140695507 -25954789 - B1_Mm SINE Alu -2 145 3 3 1658 519 200 17 0 chrX 140695519 140695639 -25954657 - Lx9 LINE L1 -7 7637 7516 3 1658 23 68 0 0 chrX 140695656 140695700 -25954596 + AT_rich Low_complexity Low_complexity 1 44 0 3 1658 1127 97 14 0 chrX 140695883 140696027 -25954269 + B1_Mus2 SINE Alu 2 147 0 3 1658 566 155 146 0 chrX 140696058 140696161 -25954135 - B1_Mur4 SINE Alu 0 150 33 3 1658 506 278 173 0 chrX 140696740 140696873 -25953423 + B3A SINE B2 10 165 -33 3 1658 258 32 0 0 chrX 140696882 140696913 -25953383 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1658 785 350 77 10 chrX 140696926 140697316 -25952980 + Lx8 LINE L1 6830 7245 -228 3 1658 524 270 61 42 chrX 140697841 140698054 -25952242 + ID_B1 SINE B4 1 217 -7 4 1658 1128 229 96 130 chrX 140698265 140698539 -25951757 - ORR1D1 LTR MaLR -11 363 94 4 1658 3788 103 40 2 chrX 140698539 140699062 -25951234 - Lx3A LINE L1 -7 6974 6432 4 1658 1128 229 96 130 chrX 140699062 140699163 -25951133 - ORR1D1 LTR MaLR -281 93 1 4 1658 886 95 0 0 chrX 140699360 140699486 -25950810 + B1_Mm SINE Alu 1 126 -21 4 1658 843 206 0 0 chrX 140699486 140699666 -25950630 + GA-rich Low_complexity Low_complexity 1 180 0 4 1658 1459 62 17 17 chrX 140699675 140699855 -25950441 + B2_Mm2 SINE B2 2 181 -14 4 1658 488 309 96 106 chrX 140699974 140700162 -25950134 - L1MB8 LINE L1 -194 5984 5773 4 1658 1215 49 7 27 chrX 140700162 140700310 -25949986 + B1_Mm SINE Alu 2 146 -1 4 1658 488 309 96 106 chrX 140700310 140700610 -25949686 - L1MB8 LINE L1 -406 5772 5501 4 1658 472 268 16 0 chrX 140700695 140700822 -25949474 - RSINE1 SINE B4 -35 130 2 4 1658 1210 62 7 0 chrX 140701357 140701501 -25948795 - B1_Mus1 SINE Alu -3 145 1 4 1658 217 125 0 0 chrX 140701711 140701743 -25948553 + B2_Mm2 SINE B2 10 41 -154 4 1658 736 97 152 40 chrX 140702046 140702197 -25948099 + B2_Mm2 SINE B2 27 194 -1 4 1658 872 174 22 0 chrX 140702212 140702350 -25947946 + B1_Mur4 SINE Alu 1 141 -9 4 1658 198 0 0 0 chrX 140702351 140702373 -25947923 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 4 1658 185 35 69 0 chrX 140702414 140702443 -25947853 + (TTTTC)n Simple_repeat Simple_repeat 4 34 0 4 1658 257 261 90 90 chrX 140702857 140702888 -25947408 - B4 SINE B4 -69 223 102 4 1658 429 264 0 0 chrX 140702888 140702979 -25947317 - PB1D10 SINE Alu -10 107 17 4 1658 1674 226 56 14 chrX 140703225 140703669 -25946627 + RLTR11A2 LTR ERVK 7 469 -58 4 1658 879 191 46 25 chrX 140703702 140703980 -25946316 + RMER17C LTR ERVK 1 477 -429 4 1658 351 0 0 0 chrX 140704036 140704075 -25946221 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 4 1658 1322 38 0 0 chrX 140704075 140704235 -25946061 - B2_Mm1a SINE B2 -33 160 1 4 1658 480 150 63 191 chrX 140704235 140704412 -25945884 + RMER17C LTR ERVK 253 405 -5 4 1658 1377 85 23 0 chrX 140704471 140704647 -25945649 + B2_Mm2 SINE B2 2 181 -14 4 1658 314 113 343 19 chrX 140704679 140704784 -25945512 + B2_Mm2 SINE B2 47 185 -10 4 1658 991 242 75 42 chrX 140704813 140704917 -25945379 + Lx7 LINE L1 7271 7375 -321 4 1658 210 118 0 0 chrX 140704917 140704951 -25945345 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 1658 991 242 75 42 chrX 140704951 140705076 -25945220 + Lx7 LINE L1 7376 7499 -197 4 1658 1537 55 28 0 chrX 140705076 140705257 -25945039 - B2_Mm2 SINE B2 -8 187 2 4 1658 991 242 75 42 chrX 140705257 140705410 -25944886 + Lx7 LINE L1 7500 7666 -30 4 1658 390 126 41 31 chrX 140705428 140705526 -25944770 - Lx7 LINE L1 -162 7534 7436 4 1658 1380 178 68 0 chrX 140705524 140705760 -25944536 - Lx7 LINE L1 -683 7013 6762 4 1658 1672 105 15 190 chrX 140705784 140706077 -25944219 + ORR1B1 LTR MaLR 1 334 -60 4 1658 905 34 193 0 chrX 140706077 140706196 -25944100 + B1_Mus2 SINE Alu 1 142 -5 4 1658 1672 138 54 57 chrX 140706196 140706223 -25944073 + ORR1B1 LTR MaLR 335 353 -41 4 1658 1293 41 7 0 chrX 140706223 140706368 -25943928 + B1_Mm SINE Alu 2 147 0 4 1658 279 0 0 0 chrX 140706371 140706402 -25943894 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1658 1639 105 15 190 chrX 140706402 140706414 -25943882 + ORR1B1 LTR MaLR 288 288 -41 4 1658 1361 84 39 17 chrX 140706414 140706595 -25943701 + B2_Mm2 SINE B2 2 186 -9 4 1658 1639 105 15 190 chrX 140706595 140706645 -25943651 + ORR1B1 LTR MaLR 288 321 -8 4 1658 1550 182 19 15 chrX 140706647 140706915 -25943381 - Lx6 LINE L1 -725 6735 6467 4 1658 498 246 117 34 chrX 140706918 140707124 -25943172 - Lx7 LINE L1 -1612 6084 5862 4 1658 5907 73 12 4 chrX 140707125 140707963 -25942333 + ORR1A1-int LTR MaLR 288 1132 -660 4 1658 3699 97 10 71 chrX 140707957 140708579 -25941717 - RLTR6_Mm LTR ERV1 -70 584 1 4 1658 12961 40 23 10 chrX 140708579 140711349 -25938947 - MMVL30-int LTR ERV1 0 3698 772 4 1658 390 179 118 40 chrX 140711697 140711849 -25938447 - MMVL30-int LTR ERV1 -7023 533 280 4 1658 6591 24 46 15 chrX 140711843 140712647 -25937649 - RLTR6-int LTR ERV1 -6949 829 1 4 1658 3826 99 9 68 chrX 140712648 140713290 -25937006 - RLTR6_Mm LTR ERV1 -50 604 1 4 1658 5448 25 3 1 chrX 140713290 140713957 -25936339 + ORR1A0-int LTR MaLR 1125 1792 0 4 1658 825 109 0 49 chrX 140713957 140714089 -25936207 + ORR1A0 LTR MaLR 1 127 -219 4 1658 210 91 0 0 chrX 140714089 140714122 -25936174 + (TTGG)n Simple_repeat Simple_repeat 2 34 0 4 1658 825 109 0 49 chrX 140714122 140714133 -25936163 + ORR1A0 LTR MaLR 128 137 -209 4 1658 441 224 100 13 chrX 140714139 140714304 -25935992 - L1M2 LINE L1 -1483 4660 4469 4 1658 1426 77 22 0 chrX 140714306 140714488 -25935808 - B2_Mm1t SINE B2 -7 186 1 4 1658 1688 41 0 10 chrX 140714506 140714701 -25935595 - B2_Mm1a SINE B2 0 193 1 4 1658 234 189 0 19 chrX 140714706 140714760 -25935536 - Lx7 LINE L1 -46 5834 5782 4 1658 402 71 0 0 chrX 140714785 140714828 -25935468 + (T)n Simple_repeat Simple_repeat 1 43 0 4 1658 1270 54 0 0 chrX 140714828 140714975 -25935321 - B1_Mus2 SINE Alu 0 147 1 4 1658 402 71 0 0 chrX 140714975 140714987 -25935309 + (T)n Simple_repeat Simple_repeat 1 12 0 4 1658 772 178 8 8 chrX 140714987 140715117 -25935179 - B1_Mus1 SINE Alu 0 148 19 4 1658 1222 151 22 84 chrX 140715117 140715392 -25934904 - Lx7 LINE L1 -677 5203 4946 4 1658 1343 114 49 170 chrX 140715390 140715696 -25934600 - L1_Mus1 LINE L1 0 6567 6299 4 1658 735 124 0 34 chrX 140715691 140715808 -25934488 - Lx7 LINE L1 -921 4959 4847 4 1658 999 87 65 0 chrX 140716116 140716254 -25934042 - B1_Mus2 SINE Alu 0 147 1 4 1658 211 123 60 30 chrX 140716775 140716842 -25933454 + (TTATA)n Simple_repeat Simple_repeat 2 70 0 4 1658 1059 82 0 33 chrX 140716868 140717019 -25933277 + B1_Mus1 SINE Alu 3 148 0 4 1658 315 0 0 0 chrX 140717607 140717642 -25932654 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1658 1214 43 0 0 chrX 140717642 140717780 -25932516 - B1_Mus2 SINE Alu -9 138 1 4 1658 2956 88 51 29 chrX 140717972 140718426 -25931870 - RMER16 LTR ERVK 0 533 70 4 1658 1223 74 0 0 chrX 140718706 140718854 -25931442 - B1_Mus1 SINE Alu 0 148 1 4 1658 383 297 102 13 chrX 140718921 140719078 -25931218 + B4A SINE B4 118 288 -4 4 1658 313 22 43 0 chrX 140719123 140719169 -25931127 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1658 1042 117 0 20 chrX 140719226 140719374 -25930922 + B1_Mus1 SINE Alu 4 148 0 4 1658 369 86 0 0 chrX 140719404 140719462 -25930834 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 1658 213 218 0 18 chrX 140719591 140719604 -25930692 + polypurine Low_complexity Low_complexity 4 16 0 4 1658 1053 119 107 0 chrX 140719604 140719763 -25930533 + B2_Mm2 SINE B2 1 176 -19 4 1658 213 218 0 18 chrX 140719763 140719805 -25930491 + polypurine Low_complexity Low_complexity 17 57 0 4 1658 1490 67 6 0 chrX 140721256 140721434 -25928862 + B2_Mm1t SINE B2 1 179 -14 4 1658 1324 34 0 0 chrX 140722980 140723126 -25927170 - B1_Mus2 SINE Alu 0 147 2 4 1658 1259 68 0 0 chrX 140723276 140723422 -25926874 - B1_Mus2 SINE Alu 0 147 2 4 1658 1767 21 5 0 chrX 140723434 140723624 -25926672 - B2_Mm1t SINE B2 -2 191 1 4 1658 335 274 60 26 chrX 140723718 140723834 -25926462 + L1MD LINE L1 4784 4903 -1243 4 1658 21 36 0 0 chrX 140723834 140723862 -25926434 + AT_rich Low_complexity Low_complexity 1 28 0 4 1658 1308 34 0 0 chrX 140723862 140724008 -25926288 - B1_Mus2 SINE Alu 0 147 2 4 1658 562 269 29 106 chrX 140724009 140724283 -25926013 + L1MD LINE L1 4892 5144 -1002 4 1658 991 123 7 0 chrX 140724398 140724544 -25925752 + B2_Mm1t SINE B2 1 147 -46 4 1658 310 109 15 15 chrX 140724578 140724643 -25925653 + B2_Mm1a SINE B2 127 191 -2 4 1658 1029 240 5 0 chrX 140724656 140724856 -25925440 + B3 SINE B2 16 216 0 4 1658 805 68 0 0 chrX 140724869 140724972 -25925324 + B1_Mus2 SINE Alu 45 147 0 4 1658 359 297 11 21 chrX 140725017 140725110 -25925186 + PB1D10 SINE Alu 5 96 -21 4 1658 1104 280 68 106 chrX 140725182 140725429 -25924867 + L1ME1 LINE L1 5364 5600 -579 4 1658 1523 65 43 0 chrX 140725429 140725615 -25924681 + B2_Mm2 SINE B2 1 194 -1 4 1658 1257 61 0 0 chrX 140725615 140725762 -25924534 + B1_Mus1 SINE Alu 1 148 0 4 1658 279 0 0 0 chrX 140725772 140725803 -25924493 + (TTA)n Simple_repeat Simple_repeat 3 33 0 4 1658 1230 50 0 0 chrX 140725806 140725946 -25924350 - B1_Mus2 SINE Alu -7 140 1 4 1658 1104 282 71 100 chrX 140725946 140726313 -25923983 + L1ME1 LINE L1 5601 5992 -367 4 1658 189 0 0 0 chrX 140726313 140726334 -25923962 + (GGGA)n Simple_repeat Simple_repeat 1 21 0 4 1658 462 300 118 26 chrX 140726334 140726358 -25923938 + L1ME1 LINE L1 5993 6013 -346 4 1658 317 319 6 59 chrX 140726409 140726579 -25923717 + L1ME1 LINE L1 6144 6304 -55 4 1658 671 306 15 25 chrX 140726857 140727055 -25923241 + ID_B1 SINE B4 25 220 -4 4 1658 1193 162 308 35 chrX 140727092 140727430 -25922866 + RMER10A LTR ERVL 13 442 0 4 1658 842 161 7 0 chrX 140727430 140727564 -25922732 - MTC LTR MaLR -93 328 194 4 1658 237 121 0 17 chrX 140727559 140727618 -25922678 - B2_Mm2 SINE B2 -1 194 137 4 1658 1245 66 36 0 chrX 140727695 140727862 -25922434 - B2_Mm1t SINE B2 -14 179 7 4 1658 415 238 19 9 chrX 140727856 140727962 -25922334 - MTC LTR MaLR -210 211 105 4 1658 639 170 101 94 chrX 140727962 140728051 -25922245 + B1_Mur4 SINE Alu 1 103 -47 4 1658 1448 93 0 20 chrX 140728051 140728248 -25922048 - B2_Mm2 SINE B2 -2 193 1 4 1658 639 170 101 94 chrX 140728248 140728307 -25921989 + B1_Mur4 SINE Alu 104 150 0 4 1658 673 68 19 10 chrX 140728307 140728411 -25921885 + (GAAAA)n Simple_repeat Simple_repeat 5 109 0 4 1658 22 35 0 0 chrX 140728442 140728471 -25921825 + AT_rich Low_complexity Low_complexity 1 29 0 4 1658 244 81 0 26 chrX 140728476 140728514 -25921782 - B2_Mm2 SINE B2 -112 83 47 4 1658 1185 121 28 11 chrX 140728545 140728721 -25921575 - B2_Mm1t SINE B2 -13 180 2 4 1658 565 165 0 10 chrX 140728724 140728822 -25921474 - MTC LTR MaLR -324 97 1 4 1658 744 225 98 30 chrX 140728864 140729098 -25921198 - Lx7 LINE L1 0 7696 7447 4 1658 1254 130 11 0 chrX 140729105 140729282 -25921014 + B2_Mm1t SINE B2 1 179 -14 4 1658 397 91 0 0 chrX 140729314 140729369 -25920927 + B2_Mm2 SINE B2 47 101 -94 4 1658 1538 201 47 69 chrX 140729389 140729506 -25920790 - Lx7 LINE L1 -205 7491 7375 4 1658 1435 63 5 78 chrX 140729506 140729712 -25920584 + B2_Mm1t SINE B2 1 191 -2 4 1658 1538 201 47 69 chrX 140729712 140730000 -25920296 - Lx7 LINE L1 -322 7374 7095 4 1658 836 160 14 20 chrX 140729994 140730141 -25920155 - Lx7 LINE L1 -890 6806 6661 4 1658 2102 176 36 40 chrX 140730200 140730644 -25919652 + RMER10A LTR ERVL 1 442 0 4 1658 947 140 15 0 chrX 140730692 140730828 -25919468 + B1_Mur3 SINE Alu 1 138 -11 4 1658 252 86 0 0 chrX 140730828 140730863 -25919433 + (GA)n Simple_repeat Simple_repeat 1 35 0 4 1658 286 137 0 19 chrX 140731275 140731327 -25918969 + B3A SINE B2 6 56 -142 4 1658 369 229 12 35 chrX 140731351 140731437 -25918859 + B3 SINE B2 133 216 0 4 1658 1500 243 26 111 chrX 140731449 140731990 -25918306 - RMER5 LTR ERV1 -39 495 1 4 1658 241 208 0 0 chrX 140731991 140732039 -25918257 - L1P5 LINE L1 -315 5841 5794 4 1658 560 99 0 12 chrX 140732039 140732121 -25918175 + B2_Mm2 SINE B2 1 81 -114 5 1658 456 282 50 25 chrX 140732496 140732616 -25917680 - ETnERV2-int LTR ERVK -204 7202 7080 5 1658 745 90 37 9 chrX 140732616 140732743 -25917553 + B2_Mm2 SINE B2 63 192 -3 5 1658 1260 68 0 0 chrX 140732746 140732893 -25917403 + B1_Mm SINE Alu 1 147 0 5 1658 358 127 0 0 chrX 140732909 140732964 -25917332 + ORR1C2 LTR MaLR 330 384 0 5 1658 492 234 54 0 chrX 140732965 140733076 -25917220 - L1M2 LINE L1 -608 5683 5567 5 1658 3779 18 0 0 chrX 140733161 140733557 -25916739 - MTA_Mm LTR MaLR 0 396 1 5 1658 319 323 30 0 chrX 140733760 140733893 -25916403 - L1M2 LINE L1 -755 5429 5293 5 1658 1434 68 23 0 chrX 140734037 140734214 -25916082 + B2_Mm2 SINE B2 1 181 -14 5 1658 501 17 0 0 chrX 140734216 140734274 -25916022 + (GAAA)n Simple_repeat Simple_repeat 2 59 0 5 1658 1247 68 0 0 chrX 140734280 140734427 -25915869 + B1_Mus1 SINE Alu 2 148 0 5 1658 785 169 6 0 chrX 140734428 140734588 -25915708 + GA-rich Low_complexity Low_complexity 2 162 0 5 1658 421 283 0 19 chrX 140734588 140734696 -25915600 - B1_Mus2 SINE Alu -41 106 1 5 1658 246 310 17 0 chrX 140734874 140734932 -25915364 - RSINE1 SINE B4 -12 153 95 5 1658 410 190 9 74 chrX 140734932 140735040 -25915256 - U6 snRNA snRNA -5 102 2 5 1658 442 248 12 222 chrX 140735182 140735273 -25915023 - ID_B1 SINE B4 -10 214 157 5 1658 1294 48 0 0 chrX 140735273 140735420 -25914876 - B1_Mus1 SINE Alu 0 148 2 5 1658 442 248 12 222 chrX 140735420 140735499 -25914797 - ID_B1 SINE B4 -68 156 80 5 1658 385 262 0 0 chrX 140736733 140736813 -25913483 + ID4 SINE ID 2 81 -2 5 1658 240 35 0 0 chrX 140736986 140737015 -25913281 + (TAG)n Simple_repeat Simple_repeat 2 30 0 5 1658 234 200 80 0 chrX 140737036 140737086 -25913210 + B3 SINE B2 56 109 -107 5 1658 1075 75 30 0 chrX 140737140 140737274 -25913022 + B1_Mus1 SINE Alu 1 138 -10 5 1658 21 0 0 0 chrX 140737305 140737326 -25912970 + AT_rich Low_complexity Low_complexity 1 21 0 5 1658 246 32 0 0 chrX 140737453 140737484 -25912812 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1658 369 43 0 0 chrX 140737570 140737617 -25912679 + (CATA)n Simple_repeat Simple_repeat 2 48 0 5 1658 4701 80 0 18 chrX 140737617 140738214 -25912082 + LTRIS_Mus LTR ERV1 1 586 -1 5 1658 324 0 0 0 chrX 140738214 140738250 -25912046 + (CATA)n Simple_repeat Simple_repeat 4 39 0 5 1658 1986 154 73 44 chrX 140738309 140738785 -25911511 + RMER16 LTR ERVK 7 456 -77 5 1658 207 0 0 0 chrX 140738785 140738808 -25911488 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1658 1112 74 0 0 chrX 140738808 140738943 -25911353 - B1_Mus1 SINE Alu -11 137 3 5 1658 1140 231 78 117 chrX 140738943 140739013 -25911283 + RMER16 LTR ERVK 457 532 -1 5 1658 246 156 0 0 chrX 140739013 140739058 -25911238 + CT-rich Low_complexity Low_complexity 2 46 0 5 1658 682 224 14 14 chrX 140739064 140739209 -25911087 - B1_Mm SINE Alu 0 147 3 5 1658 991 33 0 0 chrX 140739228 140739350 -25910946 - B1_Mm SINE Alu -2 145 24 5 1658 1129 98 30 30 chrX 140739385 140739553 -25910743 - B2_Mm2 SINE B2 -27 168 1 5 1658 1224 78 66 152 chrX 140739587 140739779 -25910517 + B2_Mm1t SINE B2 1 160 -33 5 1658 351 0 0 0 chrX 140739779 140739818 -25910478 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 5 1658 1224 78 66 152 chrX 140739818 140739836 -25910460 + B2_Mm1t SINE B2 161 192 -1 5 1658 207 0 0 0 chrX 140739861 140739884 -25910412 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1658 654 108 189 47 chrX 140739884 140739933 -25910363 - B1_Mm SINE Alu -2 145 100 5 1658 1254 62 0 0 chrX 140739933 140740079 -25910217 + B1_Mus2 SINE Alu 2 147 0 5 1658 654 108 189 47 chrX 140740079 140740156 -25910140 - B1_Mm SINE Alu -48 99 1 5 1658 397 284 127 68 chrX 140740312 140740509 -25909787 - B3A SINE B2 -14 202 3 5 1658 514 336 5 75 chrX 140740550 140740696 -25909600 - B3A SINE B2 -30 186 58 5 1658 1414 66 66 0 chrX 140740696 140740878 -25909418 - B2_Mm2 SINE B2 -1 194 1 5 1658 514 333 5 76 chrX 140740878 140740939 -25909357 - B3A SINE B2 -141 57 2 5 1658 31 58 0 0 chrX 140741100 140741152 -25909144 + AT_rich Low_complexity Low_complexity 1 52 0 5 1658 641 221 55 35 chrX 140741182 140741327 -25908969 + B1_Mur3 SINE Alu 1 148 -1 5 1658 1030 110 14 0 chrX 140741329 140741474 -25908822 + B1_Mus1 SINE Alu 2 148 0 5 1658 25 0 0 0 chrX 140741475 140741500 -25908796 + AT_rich Low_complexity Low_complexity 1 25 0 5 1658 994 90 8 0 chrX 140741509 140741642 -25908654 + B2_Mm2 SINE B2 1 134 -61 5 1658 216 0 0 0 chrX 140741642 140741666 -25908630 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 1658 351 0 0 0 chrX 140741666 140741704 -25908592 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1658 820 178 56 33 chrX 140741704 140741749 -25908547 + B2_Mm1t SINE B2 136 183 -10 5 1658 234 297 35 83 chrX 140741750 140741835 -25908461 + L1ME3A LINE L1 5802 5880 -293 5 1658 1280 105 28 0 chrX 140741835 140742016 -25908280 + B2_Mm2 SINE B2 3 188 -7 5 1658 234 297 35 83 chrX 140742016 140742099 -25908197 + L1ME3A LINE L1 5881 5962 -211 5 1658 771 290 33 14 chrX 140742221 140742431 -25907865 + Lx5 LINE L1 6820 7033 -17 5 1658 773 262 79 60 chrX 140742550 140742867 -25907429 - Lx7 LINE L1 -327 7369 7047 5 1658 2147 254 61 36 chrX 140742866 140743622 -25906674 - Lx5 LINE L1 -17 7033 6459 5 1658 1448 81 16 0 chrX 140743665 140743851 -25906445 - B2_Mm2 SINE B2 -5 190 2 5 1658 180 0 0 0 chrX 140743866 140743886 -25906410 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5 1658 853 119 4 59 chrX 140743887 140744043 -25906253 - B2_Mm2 SINE B2 -34 161 11 5 1658 844 55 0 0 chrX 140744099 140744209 -25906087 - B1_Mus2 SINE Alu 0 147 38 5 1658 348 225 0 59 chrX 140744134 140744219 -25906077 - MT2B LTR ERVL -337 264 185 5 1658 183 42 0 0 chrX 140744371 140744395 -25905901 + (ATATG)n Simple_repeat Simple_repeat 1 24 0 5 1658 1464 67 28 0 chrX 140744439 140744619 -25905677 - B2_Mm2 SINE B2 -10 185 1 5 1658 1205 74 0 7 chrX 140744727 140744876 -25905420 + B1_Mus1 SINE Alu 1 148 0 5 1658 948 17 0 48 chrX 140745008 140745134 -25905162 - B1_Mus2 SINE Alu 0 147 28 5 1658 781 299 0 0 chrX 140745140 140745337 -25904959 - B3 SINE B2 -6 210 14 5 1658 431 225 183 0 chrX 140745374 140745494 -25904802 - B1_Mur2 SINE Alu -2 147 6 5 1658 1266 35 0 7 chrX 140745740 140745885 -25904411 + B1_Mus2 SINE Alu 2 145 -2 5 1658 3053 9 0 0 chrX 140745894 140746216 -25904080 + RLTRETN_Mm LTR ERVK 1 322 0 5 1658 240 333 27 54 chrX 140746261 140746372 -25903924 + ID_B1 SINE B4 75 182 -42 5 1658 23 0 0 0 chrX 140746398 140746421 -25903875 + AT_rich Low_complexity Low_complexity 1 23 0 5 1658 1201 51 0 0 chrX 140746431 140746568 -25903728 + B1_Mus1 SINE Alu 1 137 -11 5 1658 200 59 29 0 chrX 140746568 140746602 -25903694 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1658 629 262 33 20 chrX 140746603 140746755 -25903541 + RSINE1 SINE B4 1 154 -11 5 1658 405 0 0 0 chrX 140747091 140747136 -25903160 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1658 1754 212 60 10 chrX 140747286 140747672 -25902624 - MTD LTR MaLR -14 405 1 5 1658 37 76 0 0 chrX 140747855 140747934 -25902362 + AT_rich Low_complexity Low_complexity 1 79 0 5 1658 600 14 0 0 chrX 140748162 140748231 -25902065 + (GA)n Simple_repeat Simple_repeat 1 69 0 5 1658 605 168 161 0 chrX 140748238 140748393 -25901903 - RMER17C LTR ERVK -230 180 1 5 1658 2408 149 61 33 chrX 140748393 140748851 -25901445 + RMER17C-int LTR ERVK 1755 2225 -1013 5 1658 234 143 0 0 chrX 140749062 140749104 -25901192 - ID_B1 SINE B4 -1 223 182 5 1658 1573 148 104 24 chrX 140749106 140749444 -25900852 + RMER10A LTR ERVL 1 365 -77 5 1658 426 329 25 19 chrX 140751158 140751316 -25898980 - RSINE1 SINE B4 -4 161 3 5 1658 195 190 0 0 chrX 140751636 140751694 -25898602 + A-rich Low_complexity Low_complexity 1 58 0 5 1658 304 281 34 0 chrX 140751726 140751740 -25898556 + B1_Mus2 SINE Alu 52 142 -4 5 1658 391 203 0 0 chrX 140751740 140751814 -25898482 + ID_B1 SINE B4 146 219 -5 5 1658 455 0 18 0 chrX 140751943 140751998 -25898298 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 5 1658 36 0 0 0 chrX 140752677 140752713 -25897583 + GC_rich Low_complexity Low_complexity 1 36 0 5 1658 248 209 0 0 chrX 140754675 140754708 -25895588 + ID4_ SINE ID 2 34 -49 5 1658 240 179 410 0 chrX 140754708 140754786 -25895510 + PB1D7 SINE Alu 2 111 -9 5 1658 1431 78 39 0 chrX 140755080 140755259 -25895037 + B2_Mm2 SINE B2 2 187 -8 5 1658 27 29 0 0 chrX 140755340 140755374 -25894922 + AT_rich Low_complexity Low_complexity 1 34 0 5 1658 21 36 0 0 chrX 140755858 140755886 -25894410 + AT_rich Low_complexity Low_complexity 1 28 0 5 1658 474 171 170 128 chrX 140756079 140756220 -25894076 + B1_Mur4 SINE Alu 3 149 -1 5 1658 307 300 32 25 chrX 140756293 140756405 -25893891 - PB1D10 SINE Alu -31 118 2 5 1658 185 305 264 40 chrX 140757370 140757544 -25892752 - L2 LINE L2 -375 3044 2832 5 1658 844 186 204 0 chrX 140757923 140758095 -25892201 + B3 SINE B2 2 208 -8 5 1658 281 225 122 24 chrX 140758283 140758365 -25891931 + RLTR25A LTR ERVK 493 582 -521 5 1658 771 31 10 0 chrX 140758311 140758408 -25891888 + B1_Mus2 SINE Alu 50 147 0 5 1658 491 231 24 49 chrX 140758937 140759060 -25891236 + PB1D9 SINE Alu 1 120 0 5 1658 264 256 184 11 chrX 140759309 140759391 -25890905 - ID_B1 SINE B4 -72 152 56 5 1658 412 331 76 70 chrX 140759391 140759563 -25890733 + B4A SINE B4 2 174 -118 5 1658 391 214 0 72 chrX 140759749 140759776 -25890520 - BC1_Mm scRNA scRNA -43 109 83 5 1658 385 285 153 0 chrX 140759776 140759913 -25890383 - RSINE1 SINE B4 -6 159 2 6 1658 448 214 0 68 chrX 140759913 140760001 -25890295 - ID4_ SINE ID -70 82 2 5 1658 5704 108 79 4 chrX 140760016 140761142 -25889154 - Lx4B LINE L1 -832 6226 5018 6 1658 277 164 14 14 chrX 140761130 140761199 -25889097 - L1_Mur1 LINE L1 -388 5498 5425 6 1658 1509 40 79 0 chrX 140761206 140761222 -25889074 - B2_Mm1t SINE B2 -2 191 176 6 1658 243 0 0 0 chrX 140761222 140761249 -25889047 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 6 1658 1509 40 79 0 chrX 140761249 140761409 -25888887 - B2_Mm1t SINE B2 -18 175 2 6 1658 1252 117 28 0 chrX 140761418 140761597 -25888699 - B2_Mm2 SINE B2 -9 186 3 6 1658 226 273 0 0 chrX 140761678 140761722 -25888574 + PB1D10 SINE Alu 1 44 -73 6 1658 233 238 0 0 chrX 140761684 140761726 -25888570 + ID_B1 SINE B4 88 129 -95 6 1658 606 341 51 21 chrX 140762069 140762303 -25887993 - B4 SINE B4 0 292 52 6 1658 316 105 0 0 chrX 140762393 140762450 -25887846 - L1Md_F2 LINE L1 0 6582 6526 6 1658 550 30 0 0 chrX 140762450 140762516 -25887780 + L1Md_F2 LINE L1 6208 6273 -309 6 1658 891 174 0 32 chrX 140762640 140762794 -25887502 - B1_Mur4 SINE Alu 0 150 2 6 1658 1031 121 108 0 chrX 140763232 140763398 -25886898 - B2_Mm2 SINE B2 -10 185 2 6 1658 204 67 0 0 chrX 140763451 140763481 -25886815 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 6 1658 1097 108 0 6 chrX 140763482 140763641 -25886655 - B2_Mm2 SINE B2 -37 158 1 6 1658 321 47 0 0 chrX 140763903 140763946 -25886350 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 6 1658 1174 37 15 0 chrX 140763946 140764080 -25886216 - B1_Mus1 SINE Alu -11 137 2 6 1658 665 262 174 43 chrX 140764088 140764575 -25885721 - L1MA7 LINE L1 -3 6288 5738 6 1658 221 103 0 0 chrX 140764599 140764628 -25885668 - ID4_ SINE ID -6 77 49 6 1658 731 245 81 33 chrX 140764895 140765106 -25885190 - ID_B1 SINE B4 -2 222 2 6 1658 507 159 43 0 chrX 140765732 140765821 -25884475 - B1_Mm SINE Alu -3 146 51 6 1658 321 218 53 160 chrX 140765828 140765893 -25884403 - L1ME1 LINE L1 -1799 5986 5929 6 1658 531 197 148 47 chrX 140765893 140766021 -25884275 - B1_Mur2 SINE Alu -8 141 1 6 1658 321 230 50 106 chrX 140766021 140766140 -25884156 - L1ME1 LINE L1 -251 5928 5814 6 1658 1260 49 0 0 chrX 140766154 140766297 -25883999 + B1_Mus2 SINE Alu 5 147 0 6 1658 183 80 0 0 chrX 140766297 140766322 -25883974 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1658 322 157 0 22 chrX 140766348 140766414 -25883882 - B2_Mm2 SINE B2 -107 109 47 6 1658 33 0 0 0 chrX 140766483 140766516 -25883780 + AT_rich Low_complexity Low_complexity 1 33 0 6 1658 1368 91 10 31 chrX 140766585 140766777 -25883519 + B2_Mm1t SINE B2 2 189 -4 6 1658 1293 48 0 0 chrX 140767057 140767203 -25883093 + B1_Mus2 SINE Alu 2 147 0 6 1658 644 168 26 34 chrX 140767230 140767347 -25882949 + B1_Mus1 SINE Alu 33 148 0 6 1658 333 211 67 53 chrX 140767440 140767583 -25882713 - L1MB5 LINE L1 -187 5991 5844 6 1658 387 209 133 0 chrX 140767581 140767686 -25882610 - L1MB5 LINE L1 -693 5481 5363 6 1658 262 314 98 0 chrX 140767698 140767800 -25882496 - ID_B1 SINE B4 -4 220 109 6 1658 607 306 28 0 chrX 140767939 140768119 -25882177 - ID_B1 SINE B4 -38 186 2 6 1658 909 89 69 46 chrX 140768149 140768279 -25882017 - B1_Mus2 SINE Alu -13 134 2 6 1658 275 299 84 29 chrX 140768598 140768836 -25881460 - L1MC LINE L1 -1115 5031 4781 6 1658 1172 75 7 0 chrX 140769228 140769374 -25880922 + B1_Mus1 SINE Alu 2 148 0 6 1658 225 0 0 0 chrX 140771213 140771238 -25879058 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1659 366 302 35 14 chrX 140772544 140772685 -25877611 - MER5A1 DNA MER1_type -20 146 3 6 1659 833 215 65 81 chrX 140773005 140773382 -25876914 - RMER10B LTR ERVL -43 399 3 6 1659 261 0 0 0 chrX 140773810 140773839 -25876457 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 6 1659 999 99 30 0 chrX 140773840 140773971 -25876325 - B1_Mus1 SINE Alu -13 135 1 6 1659 658 117 225 0 chrX 140774545 140774665 -25875631 - B1_Mus2 SINE Alu 0 147 1 6 1659 847 159 7 42 chrX 140774938 140775082 -25875214 - B1_Mur3 SINE Alu -9 140 2 6 1659 1382 72 27 16 chrX 140775543 140775728 -25874568 - B2_Mm2 SINE B2 -8 187 1 6 1659 401 48 0 46 chrX 140775735 140775800 -25874496 + (T)n Simple_repeat Simple_repeat 1 62 0 6 1659 1236 56 0 0 chrX 140775804 140775947 -25874349 - B1_Mus2 SINE Alu -4 143 1 6 1659 239 365 0 0 chrX 140775974 140776048 -25874248 - ID4 SINE ID -6 77 4 6 1659 1265 54 0 0 chrX 140776266 140776413 -25873883 - B1_Mus1 SINE Alu 0 148 2 6 1659 21 71 0 0 chrX 140776774 140776816 -25873480 + AT_rich Low_complexity Low_complexity 1 42 0 6 1659 23 0 0 0 chrX 140777447 140777470 -25872826 + AT_rich Low_complexity Low_complexity 1 23 0 6 1659 897 51 0 8 chrX 140777470 140777588 -25872708 - B1_Mus2 SINE Alu -1 146 30 6 1659 556 49 96 10 chrX 140777791 140777895 -25872401 + L1_Mus3 LINE L1 6520 6632 -6 6 1659 217 276 0 17 chrX 140777913 140777972 -25872324 - RSINE1 SINE B4 -104 61 4 6 1659 322 339 92 44 chrX 140778116 140778366 -25871930 - MLT1E1A LTR MaLR -23 657 396 6 1659 507 45 0 0 chrX 140778452 140778518 -25871778 + (TG)n Simple_repeat Simple_repeat 2 67 0 6 1659 1128 56 7 0 chrX 140778940 140779082 -25871214 + B1_Mus1 SINE Alu 3 145 -3 6 1659 1251 109 16 10 chrX 140779243 140779437 -25870859 - B2_Mm2 SINE B2 0 195 1 6 1659 1084 83 0 0 chrX 140779442 140779586 -25870710 - B2_Mm2 SINE B2 -51 144 1 6 1659 933 126 36 0 chrX 140779887 140780061 -25870235 - B2_Mm2 SINE B2 -20 196 1 6 1659 587 206 40 0 chrX 140780543 140780669 -25869627 - B1_Mur3 SINE Alu 0 149 19 6 1659 299 321 0 0 chrX 140781483 140781564 -25868732 + BC1_Mm scRNA scRNA 4 84 -68 6 1659 5835 18 0 0 chrX 140781724 140782391 -25867905 + L1Md_A LINE L1 5916 6582 0 6 1659 682 180 179 5 chrX 140782797 140782987 -25867309 - Lx9 LINE L1 -1 7643 7421 6 1659 1328 93 28 0 chrX 140782994 140783176 -25867120 - B2_Mm2 SINE B2 -7 188 2 6 1659 650 248 14 14 chrX 140783586 140783733 -25866563 + B1_Mur1 SINE Alu 3 149 0 6 1659 579 153 0 289 chrX 140784040 140784251 -25866045 + B1_Mur3 SINE Alu 1 150 0 6 1659 315 280 158 10 chrX 140784348 140784449 -25865847 - MER20 DNA MER1_type -56 163 48 6 1659 1160 54 7 0 chrX 140785132 140785279 -25865017 - B1_Mus1 SINE Alu 0 148 1 6 1659 1221 54 0 0 chrX 140785628 140785776 -25864520 - B1_Mus1 SINE Alu 0 148 1 6 1659 860 225 87 25 chrX 140786019 140786215 -25864081 + B3 SINE B2 3 210 -6 6 1659 420 130 0 0 chrX 140786514 140786583 -25863713 + (TA)n Simple_repeat Simple_repeat 2 70 0 6 1659 276 197 66 0 chrX 140786612 140786673 -25863623 - ID4_ SINE ID -17 66 2 6 1659 1204 41 0 0 chrX 140786858 140787005 -25863291 - B1_Mus2 SINE Alu 0 147 1 6 1659 302 244 12 24 chrX 140787424 140787508 -25862788 + B4 SINE B4 3 85 -207 6 1659 22 56 0 0 chrX 140787861 140787897 -25862399 + AT_rich Low_complexity Low_complexity 1 36 0 6 1659 598 268 14 14 chrX 140788568 140788712 -25861584 - B1_Mur2 SINE Alu 0 149 6 6 1659 272 27 27 0 chrX 140788869 140788906 -25861390 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 6 1659 1131 71 0 0 chrX 140788908 140789049 -25861247 - B1_Mus2 SINE Alu -6 141 1 6 1659 1218 234 21 18 chrX 140789313 140789589 -25860707 - Lx7 LINE L1 -841 6803 6375 6 1659 508 259 96 40 chrX 140789825 140790074 -25860222 - Lx7 LINE L1 -6891 837 575 6 1659 893 71 47 0 chrX 140791868 140791995 -25858301 - B1_Mus1 SINE Alu 0 148 16 6 1659 639 213 56 7 chrX 140792002 140792144 -25858152 - B1_Mur3 SINE Alu 0 149 1 6 1659 352 175 127 47 chrX 140792193 140792343 -25857953 - L1M5 LINE L1 -464 5709 5548 6 1659 259 155 0 49 chrX 140792408 140792469 -25857827 + (GTTTG)n Simple_repeat Simple_repeat 2 59 0 6 1659 1168 61 0 0 chrX 140792471 140792618 -25857678 - B1_Mus2 SINE Alu 0 147 1 6 1659 252 341 22 45 chrX 140792622 140792711 -25857585 - RSINE1 SINE B4 -77 88 2 6 1659 188 250 0 0 chrX 140792869 140792905 -25857391 + MIRc SINE MIR 61 96 -172 6 1659 573 147 86 29 chrX 140793180 140793320 -25856976 + B1_Mur3 SINE Alu 2 149 0 6 1659 590 215 7 56 chrX 140793354 140793497 -25856799 + B1_Mur4 SINE Alu 6 141 -9 6 1659 1346 77 44 0 chrX 140794262 140794444 -25855852 + B2_Mm2 SINE B2 2 191 -4 6 1659 488 250 92 64 chrX 140794798 140794824 -25855472 + RSINE1 SINE B4 1 23 -142 6 1659 5064 76 21 32 chrX 140794824 140795545 -25854751 - L1Md_F2 LINE L1 0 6582 5870 6 1659 488 250 92 64 chrX 140795545 140795659 -25854637 + RSINE1 SINE B4 24 145 -20 6 1659 315 241 75 12 chrX 140795877 140795957 -25854339 - MER3 DNA MER1_type -110 99 15 6 1659 978 207 58 0 chrX 140795968 140796142 -25854154 + B3 SINE B2 5 188 -28 6 1659 242 211 70 0 chrX 140796187 140796244 -25854052 - ID4_ SINE ID -19 64 4 6 1659 324 313 8 34 chrX 140796256 140796270 -25854026 - ID_B1 SINE B4 -3 221 106 6 1659 406 252 38 19 chrX 140796270 140796375 -25853921 - B1F SINE Alu -18 131 25 6 1659 210 143 0 45 chrX 140796624 140796659 -25853637 + T-rich Low_complexity Low_complexity 9 42 0 6 1659 1182 62 0 0 chrX 140796659 140796805 -25853491 - B1_Mus1 SINE Alu -2 146 1 6 1659 1044 52 74 0 chrX 140796814 140796949 -25853347 - B1_Mus2 SINE Alu -1 146 2 6 1659 1542 33 5 5 chrX 140797368 140797553 -25852743 - B2_Mm1a SINE B2 -7 186 2 6 1659 1223 86 29 0 chrX 140798007 140798182 -25852114 + B2_Mm2 SINE B2 2 181 -14 7 1659 396 135 0 0 chrX 140798422 140798496 -25851800 + (CAG)n Simple_repeat Simple_repeat 1 74 0 7 1659 216 158 0 0 chrX 140798574 140798612 -25851684 + (CCA)n Simple_repeat Simple_repeat 2 39 0 7 1659 21 57 0 0 chrX 140798936 140798971 -25851325 + AT_rich Low_complexity Low_complexity 1 35 0 7 1659 234 311 15 29 chrX 140799708 140799844 -25850452 - L1ME2z LINE L1 -89 6355 6222 7 1659 1205 229 85 68 chrX 140799850 140800332 -25849964 + L1MA6 LINE L1 5762 6251 -49 7 1659 358 305 70 25 chrX 140800459 140800617 -25849679 - Lx8 LINE L1 -199 7274 7110 7 1659 977 108 7 26 chrX 140800962 140801114 -25849182 + B1_Mur3 SINE Alu 1 149 0 7 1659 609 259 102 0 chrX 140801147 140801352 -25848944 - L1MA4 LINE L1 -364 5936 5711 7 1659 634 214 79 0 chrX 140801361 140801539 -25848757 - L1MB8 LINE L1 -311 5867 5676 7 1659 231 263 53 0 chrX 140802583 140802640 -25847656 + ZP3AR Satellite Satellite 23 82 -130 7 1659 696 56 0 0 chrX 140802601 140802690 -25847606 + BC1_Mm scRNA scRNA 2 90 -62 7 1659 364 190 70 23 chrX 140803633 140803719 -25846577 - B2_Mm2 SINE B2 -19 176 87 7 1659 366 209 0 0 chrX 140804150 140804279 -25846017 + (CAG)n Simple_repeat Simple_repeat 3 131 0 7 1659 242 380 18 36 chrX 140804507 140804619 -25845677 + Charlie1a DNA MER1_type 4 113 -1342 7 1659 328 251 48 0 chrX 140804604 140804691 -25845605 - ID4 SINE ID -55 97 7 7 1659 352 157 345 18 chrX 140804718 140804828 -25845468 - B2_Mm2 SINE B2 -3 192 47 7 1659 1071 125 65 0 chrX 140804896 140805064 -25845232 - B2_Mm1t SINE B2 -14 179 1 7 1659 1055 147 5 75 chrX 140805064 140805277 -25845019 - ORR1D1 LTR MaLR -2 372 175 7 1659 219 114 0 0 chrX 140805292 140805327 -25844969 + (GA)n Simple_repeat Simple_repeat 1 35 0 7 1659 807 204 71 36 chrX 140805372 140805540 -25844756 - ORR1D1 LTR MaLR -188 186 13 7 1659 537 147 37 56 chrX 140805540 140805648 -25844648 + B1_Mm SINE Alu 41 146 -1 7 1659 291 258 22 124 chrX 140805551 140805688 -25844608 + MT2B LTR ERVL 206 328 -273 7 1659 849 191 17 35 chrX 140805665 140805839 -25844457 + B2_Mm2 SINE B2 15 185 -10 7 1659 1300 103 5 0 chrX 140805935 140806120 -25844176 + B2_Mm1a SINE B2 2 187 -6 7 1659 499 263 21 21 chrX 140806140 140806280 -25844016 - B1_Mur4 SINE Alu -6 144 5 7 1659 269 300 57 0 chrX 140806479 140806549 -25843747 - 4.5SRNA scRNA scRNA -20 74 1 7 1659 498 287 129 44 chrX 140806549 140806844 -25843452 + Charlie1a DNA MER1_type 398 717 -738 7 1659 1133 63 0 0 chrX 140806880 140807022 -25843274 - B1_Mus2 SINE Alu -5 142 1 7 1659 28 61 0 0 chrX 140807220 140807269 -25843027 + AT_rich Low_complexity Low_complexity 1 49 0 7 1659 905 99 13 7 chrX 140807269 140807422 -25842874 - L1_Mus3 LINE L1 -2 6636 6483 7 1659 815 188 0 0 chrX 140807423 140807556 -25842740 + B1_Mus2 SINE Alu 13 145 -2 7 1659 552 240 93 87 chrX 140807604 140807765 -25842531 - B3 SINE B2 -7 186 25 7 1659 224 30 30 0 chrX 140807801 140807834 -25842462 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1659 26 0 0 0 chrX 140809218 140809244 -25841052 + AT_rich Low_complexity Low_complexity 1 26 0 7 1659 742 259 95 27 chrX 140810419 140810681 -25839615 - B4 SINE B4 -10 282 3 7 1659 233 309 44 0 chrX 140813537 140813605 -25836691 + MARNA DNA Mariner 83 153 -433 7 1659 512 241 35 28 chrX 140814044 140814189 -25836107 - B3 SINE B2 -70 146 1 7 1659 186 189 0 0 chrX 140814756 140814793 -25835503 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 7 1659 488 128 298 0 chrX 140814798 140814892 -25835404 - B1_Mur4 SINE Alu -28 122 1 7 1659 1371 96 5 0 chrX 140814901 140815088 -25835208 - B2_Mm2 SINE B2 -7 188 1 7 1659 450 0 0 0 chrX 140816894 140816944 -25833352 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 1659 264 30 0 0 chrX 140817738 140817771 -25832525 + (GA)n Simple_repeat Simple_repeat 2 34 0 7 1659 791 192 4 134 chrX 140818019 140818266 -25832030 + B3 SINE B2 2 216 0 7 1659 197 378 11 63 chrX 140818632 140818807 -25831489 + L2 LINE L2 2799 2964 -455 7 1659 522 293 149 0 chrX 140818979 140819167 -25831129 - MER20 DNA MER1_type -2 217 2 7 1659 317 290 90 40 chrX 140819565 140819766 -25830530 + Lx9 LINE L1 7381 7591 -53 7 1659 435 214 267 0 chrX 140819896 140820027 -25830269 + B3 SINE B2 50 215 -1 7 1659 855 168 35 0 chrX 140820073 140820216 -25830080 - B1_Mus1 SINE Alu 0 148 1 7 1659 23 0 0 0 chrX 140820221 140820244 -25830052 + AT_rich Low_complexity Low_complexity 1 23 0 7 1659 183 319 0 0 chrX 140820675 140820722 -25829574 - L3b LINE CR1 -106 376 330 7 1659 213 159 0 0 chrX 140820749 140820793 -25829503 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1659 441 312 128 28 chrX 140821038 140821249 -25829047 - MIRb SINE MIR -8 260 29 7 1659 527 228 268 6 chrX 140821570 140821738 -25828558 - ID_B1 SINE B4 -6 218 7 7 1659 480 18 0 0 chrX 140822624 140822681 -25827615 + (CA)n Simple_repeat Simple_repeat 2 58 0 7 1659 467 282 91 0 chrX 140823084 140823194 -25827102 + PB1 SINE Alu 6 125 -2 7 1659 278 298 0 87 chrX 140823212 140823304 -25826992 + BC1_Mm scRNA scRNA 14 97 -55 7 1659 617 126 26 35 chrX 140823961 140824076 -25826220 - B1_Mur3 SINE Alu -1 148 35 7 1659 788 203 0 0 chrX 140824100 140824238 -25826058 - B1_Mus2 SINE Alu -5 142 5 7 1659 27 73 0 0 chrX 140824248 140824303 -25825993 + AT_rich Low_complexity Low_complexity 1 55 0 7 1659 284 0 28 0 chrX 140824420 140824456 -25825840 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 7 1659 1233 68 0 0 chrX 140824456 140824617 -25825679 - B2_Mm2 SINE B2 -34 161 1 7 1659 345 296 26 44 chrX 140824627 140824740 -25825556 - B1F1 SINE Alu -8 141 31 7 1659 799 299 109 42 chrX 140824763 140825242 -25825054 - L1ME1 LINE L1 -87 6092 5582 7 1659 306 271 95 20 chrX 140825268 140825415 -25824881 - L1ME1 LINE L1 -721 5463 5306 7 1659 562 280 49 0 chrX 140825642 140825785 -25824511 + RSINE1 SINE B4 2 151 -14 7 1659 617 141 0 15 chrX 140826530 140826642 -25823654 + (CACAC)n Simple_repeat Simple_repeat 4 115 0 7 1659 1150 73 0 11 chrX 140826642 140826823 -25823473 + (CAAAC)n Simple_repeat Simple_repeat 1 179 0 7 1659 617 141 0 15 chrX 140826823 140826847 -25823449 + (CACAC)n Simple_repeat Simple_repeat 1 23 0 7 1659 990 102 0 0 chrX 140826847 140827023 -25823273 + (CAAAC)n Simple_repeat Simple_repeat 4 179 0 7 1659 758 181 28 0 chrX 140827076 140827220 -25823076 - B1F2 SINE Alu -1 148 1 7 1659 437 271 9 0 chrX 140827226 140827378 -25822918 - L1MA8 LINE L1 -6 6306 6150 7 1659 440 287 148 83 chrX 140827380 140827718 -25822578 + MLT1D LTR MaLR 29 388 -117 7 1659 323 287 49 98 chrX 140827738 140827881 -25822415 - MLT1F2 LTR MaLR -204 356 221 7 1659 428 223 161 43 chrX 140827882 140828093 -25822203 - L1MA9 LINE L1 -5 6307 6072 7 1659 432 0 0 0 chrX 140828232 140828280 -25822016 + (TC)n Simple_repeat Simple_repeat 1 48 0 7 1659 3208 48 2 8 chrX 140828309 140828707 -25821589 + MTA_Mm LTR MaLR 1 396 0 7 1659 558 260 102 27 chrX 140828712 140828898 -25821398 - B4A SINE B4 -28 264 65 7 1659 237 224 0 0 chrX 140828961 140829019 -25821277 - Lx6 LINE L1 -27 7433 7376 7 1659 1519 148 0 56 chrX 140829017 140829200 -25821096 + L1_Mur2 LINE L1 4460 4630 -1247 7 1659 237 33 0 0 chrX 140829200 140829230 -25821066 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 7 1659 1519 148 0 56 chrX 140829230 140829332 -25820964 + L1_Mur2 LINE L1 4631 4729 -1148 7 1659 474 302 50 27 chrX 140829334 140829722 -25820574 + Charlie2b DNA MER1_type 1826 2254 -528 7 1659 1594 101 13 0 chrX 140829725 140829963 -25820333 - L1_Mus3 LINE L1 0 6638 6398 7 1659 378 107 0 0 chrX 140829990 140830046 -25820250 + (T)n Simple_repeat Simple_repeat 1 56 0 7 1659 1167 48 7 0 chrX 140830046 140830193 -25820103 - B1_Mus1 SINE Alu 0 148 1 7 1659 234 236 61 78 chrX 140830369 140830484 -25819812 - MER97c DNA MER1_type? -977 113 1 7 1659 281 292 112 0 chrX 140830485 140830574 -25819722 - Lx6 LINE L1 -123 7337 7239 7 1659 204 159 23 0 chrX 140830918 140830962 -25819334 + GA-rich Low_complexity Low_complexity 1 45 0 7 1659 291 295 63 0 chrX 140831186 140831281 -25819015 - PB1D10 SINE Alu -4 116 16 7 1659 589 92 8 56 chrX 140831318 140831444 -25818852 + Lx9 LINE L1 7525 7644 0 7 1659 246 32 0 0 chrX 140832078 140832109 -25818187 + (T)n Simple_repeat Simple_repeat 1 31 0 7 1659 843 39 0 0 chrX 140832877 140832980 -25817316 + (TTCC)n Simple_repeat Simple_repeat 3 105 0 7 1659 571 144 26 79 chrX 140832995 140833184 -25817112 - RMER17C LTR ERVK -135 275 97 7 1659 440 308 45 15 chrX 140833529 140833661 -25816635 - B1F SINE Alu -7 142 7 7 1659 434 243 35 53 chrX 140834160 140834273 -25816023 - PB1D10 SINE Alu -4 113 3 7 1659 433 352 60 26 chrX 140834295 140834378 -25815918 - Lx8 LINE L1 -2 7471 7385 7 1659 2747 139 100 11 chrX 140834378 140834681 -25815615 + RLTR19 LTR ERVK 1 313 -186 7 1659 459 0 0 0 chrX 140834681 140834732 -25815564 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 1659 2747 139 100 11 chrX 140834732 140834886 -25815410 + RLTR19 LTR ERVK 314 498 -1 7 1659 433 352 60 26 chrX 140834886 140835035 -25815261 - Lx8 LINE L1 -89 7384 7232 7 1659 21 36 0 0 chrX 140835232 140835260 -25815036 + AT_rich Low_complexity Low_complexity 1 28 0 7 1659 224 227 141 20 chrX 140835457 140835556 -25814740 - L2a LINE L2 -4 3422 3312 7 1659 23 0 0 0 chrX 140835710 140835733 -25814563 + AT_rich Low_complexity Low_complexity 1 23 0 7 1659 1247 75 0 0 chrX 140835782 140835928 -25814368 + B1_Mus2 SINE Alu 2 147 0 7 1659 1443 72 33 0 chrX 140836150 140836330 -25813966 + B2_Mm2 SINE B2 2 187 -8 7 1659 245 227 0 0 chrX 140836548 140836592 -25813704 + polypurine Low_complexity Low_complexity 1 44 0 7 1659 582 230 0 90 chrX 140836644 140836821 -25813475 + Lx6 LINE L1 7274 7434 -26 8 1659 700 278 35 0 chrX 140837038 140837207 -25813089 - B3A SINE B2 -23 175 1 8 1659 791 185 7 0 chrX 140838535 140838670 -25811626 - B1_Mur1 SINE Alu -1 148 13 8 1659 485 269 187 0 chrX 140838673 140838844 -25811452 + B3 SINE B2 4 206 -10 8 1659 548 200 172 0 chrX 140838858 140839003 -25811293 + Lx6 LINE L1 7265 7434 -26 8 1659 405 0 0 0 chrX 140839133 140839178 -25811118 + (GA)n Simple_repeat Simple_repeat 1 45 0 8 1659 1685 224 10 56 chrX 140839429 140839912 -25810384 + L1MA4 LINE L1 5465 5925 -375 8 1659 374 343 22 14 chrX 140840089 140840228 -25810068 + MIRb SINE MIR 104 243 -25 8 1659 495 377 17 17 chrX 140840903 140841143 -25809153 - LTR33A LTR ERVL -24 496 257 8 1659 537 222 74 0 chrX 140841859 140841967 -25808329 - B3 SINE B2 -97 119 4 8 1659 22 0 0 0 chrX 140842266 140842288 -25808008 + AT_rich Low_complexity Low_complexity 1 22 0 8 1659 277 344 25 90 chrX 140843647 140843848 -25806448 - MIR3 SINE MIR -13 195 8 8 1659 1513 83 0 30 chrX 140844029 140844228 -25806068 - B2_Mm2 SINE B2 -2 193 1 8 1659 407 346 42 36 chrX 140844294 140844486 -25805810 - ORR1E LTR MaLR -163 196 4 8 1659 211 325 0 36 chrX 140844529 140844612 -25805684 - L3b LINE CR1 -231 251 172 8 1659 315 0 0 0 chrX 140844976 140845011 -25805285 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 8 1659 223 237 0 0 chrX 140845016 140845075 -25805221 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 8 1659 554 217 38 0 chrX 140845188 140845294 -25805002 + PB1D9 SINE Alu 2 111 -9 8 1659 306 301 0 12 chrX 140845618 140845702 -25804594 + ID_B1 SINE B4 140 222 -2 8 1659 3080 52 3 0 chrX 140846375 140846741 -25803555 + L1Md_F2 LINE L1 6216 6582 0 8 1659 326 177 32 0 chrX 140846936 140846998 -25803298 - B3A SINE B2 -133 65 2 8 1659 743 228 91 9 chrX 140847157 140847316 -25802980 + B3A SINE B2 2 169 -29 8 1659 498 33 0 0 chrX 140847316 140847376 -25802920 + (CA)n Simple_repeat Simple_repeat 2 61 0 8 1659 420 239 101 116 chrX 140847376 140847405 -25802891 + B2_Mm2 SINE B2 164 187 -8 8 1659 506 250 0 10 chrX 140847759 140847860 -25802436 - B1_Mur2 SINE Alu -48 101 2 8 1659 332 289 0 156 chrX 140847860 140847919 -25802377 - MT2B LTR ERVL -347 254 120 8 1659 244 274 13 40 chrX 140848149 140848225 -25802071 - MIRb SINE MIR -159 109 33 8 1659 433 275 0 35 chrX 140848446 140848559 -25801737 + ID_B1 SINE B4 116 224 0 8 1659 314 259 12 47 chrX 140848577 140848662 -25801634 - ID4 SINE ID 0 83 2 8 1659 855 268 65 13 chrX 140848715 140849021 -25801275 - L1MA6 LINE L1 -2 6298 5977 8 1659 466 302 17 0 chrX 140849218 140849337 -25800959 - ID_B1 SINE B4 -103 121 1 8 1659 405 332 45 41 chrX 140849548 140849768 -25800528 + MIR SINE MIR 20 240 -22 8 1659 689 263 64 26 chrX 140849936 140850092 -25800204 + RSINE1 SINE B4 4 165 0 8 1659 336 206 40 20 chrX 140850233 140850332 -25799964 + L3 LINE CR1 3572 3672 -817 8 1659 278 302 187 0 chrX 140850408 140850590 -25799706 + L3 LINE CR1 3660 3875 -614 8 1659 372 344 27 27 chrX 140850692 140850877 -25799419 + L1MD2 LINE L1 6161 6345 -14 8 1659 1500 82 5 0 chrX 140850887 140851071 -25799225 + B2_Mm1t SINE B2 1 185 -8 8 1659 1624 243 45 22 chrX 140851348 140851752 -25798544 + MTD LTR MaLR 1 413 -6 8 1659 244 281 0 0 chrX 140852030 140852087 -25798209 - L2 LINE L2 -649 2770 2714 8 1659 801 146 0 0 chrX 140852118 140852283 -25798013 + (TC)n Simple_repeat Simple_repeat 2 166 0 8 1659 1401 277 28 5 chrX 140852546 140852981 -25797315 + L1MA6 LINE L1 5845 6289 -11 8 1659 888 147 0 0 chrX 140853099 140853249 -25797047 + (TTCC)n Simple_repeat Simple_repeat 2 151 0 8 1659 337 323 79 16 chrX 140855836 140855962 -25794334 - MIRc SINE MIR -116 152 19 8 1659 463 274 47 0 chrX 140856314 140856454 -25793842 - MER58B DNA MER1_type -25 316 168 8 1659 292 72 18 18 chrX 140857267 140857324 -25792972 + (CAAAAA)n Simple_repeat Simple_repeat 2 58 0 8 1659 705 231 111 58 chrX 140857335 140857542 -25792754 + B4A SINE B4 37 254 -38 8 1659 180 77 0 0 chrX 140857593 140857619 -25792677 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 8 1659 884 241 50 15 chrX 140857813 140858011 -25792285 + B3 SINE B2 1 205 -11 8 1659 41 0 0 0 chrX 140858323 140858364 -25791932 + AT_rich Low_complexity Low_complexity 1 41 0 8 1659 226 327 161 17 chrX 140859263 140859493 -25790803 + L3 LINE CR1 4083 4345 -144 8 1659 216 0 0 0 chrX 140860115 140860139 -25790157 + (A)n Simple_repeat Simple_repeat 1 24 0 8 1659 1129 277 88 26 chrX 140860381 140860848 -25789448 - L1_Mur3 LINE L1 -11 5869 5374 8 1659 459 0 0 0 chrX 140861155 140861206 -25789090 + (TG)n Simple_repeat Simple_repeat 1 51 0 8 1659 411 21 0 0 chrX 140861206 140861253 -25789043 + (GA)n Simple_repeat Simple_repeat 1 48 0 8 1659 442 299 93 31 chrX 140863249 140863411 -25786885 + MLT1J1 LTR MaLR 39 203 -241 8 1659 761 261 52 16 chrX 140863598 140863789 -25786507 + B3 SINE B2 6 203 -13 8 1659 3215 98 18 2 chrX 140863822 140864261 -25786035 - L1_Mus3 LINE L1 0 6638 6193 8 1659 3262 72 12 2 chrX 140864361 140864764 -25785532 + MTB_Mm LTR MaLR 1 407 0 8 1659 21264 75 72 18 chrX 140865013 140866363 -25783933 - L1_Mus2 LINE L1 0 6566 5224 8 1659 3868 130 68 48 chrX 140866363 140866695 -25783601 + RMER17A LTR ERVK 1 356 -395 8 1659 1091 115 0 11 chrX 140866695 140866871 -25783425 + (TCTCC)n Simple_repeat Simple_repeat 2 175 0 8 1659 3868 130 68 48 chrX 140866871 140867274 -25783022 + RMER17A LTR ERVK 357 750 -1 8 1659 21264 110 212 6 chrX 140867274 140870988 -25779308 - L1_Mus2 LINE L1 -660 5223 569 8 1659 190 329 68 14 chrX 140871727 140871801 -25778495 + MIR SINE MIR 3 80 -182 8 1659 373 267 103 5 chrX 140871808 140872011 -25778285 - L1M4 LINE L1 -1593 5051 4829 8 1659 462 237 29 22 chrX 140872102 140872240 -25778056 - MER57A-int LTR ERV1 -228 5959 5821 8 1659 743 285 99 17 chrX 140872259 140872791 -25777505 - L1M4 LINE L1 -1819 4825 4236 8 1659 897 286 50 91 chrX 140872800 140873339 -25776957 - L1M4 LINE L1 -6012 530 14 8 1659 253 0 54 0 chrX 140873435 140873472 -25776824 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 1659 700 212 188 51 chrX 140873634 140873727 -25776569 - Lx8 LINE L1 -2 7471 7343 8 1659 243 0 0 0 chrX 140873727 140873754 -25776542 + (TC)n Simple_repeat Simple_repeat 1 27 0 8 1659 700 212 188 51 chrX 140873754 140873830 -25776466 - Lx8 LINE L1 -131 7342 7259 8 1659 2926 58 8 163 chrX 140873830 140874302 -25775994 - MTB LTR MaLR 0 400 2 8 1659 700 212 188 51 chrX 140874302 140874365 -25775931 - Lx8 LINE L1 -215 7258 7206 8 1659 976 199 21 0 chrX 140874732 140874918 -25775378 - URR1A DNA MER1_type -33 193 4 8 1659 23 0 0 0 chrX 140874918 140874941 -25775355 + AT_rich Low_complexity Low_complexity 1 23 0 8 1659 711 35 0 0 chrX 140874953 140875039 -25775257 + (TTC)n Simple_repeat Simple_repeat 2 87 0 8 1659 1225 62 0 0 chrX 140875039 140875183 -25775113 - B1_Mm SINE Alu -2 145 2 8 1659 2355 77 70 0 chrX 140875187 140875514 -25774782 - L1_Mus3 LINE L1 0 6638 6289 8 1659 1614 167 37 4 chrX 140875614 140875884 -25774412 - Lx5 LINE L1 0 7050 6772 8 1659 306 279 11 23 chrX 140877173 140877261 -25773035 + Tigger5 DNA MER2_type 20 106 -2300 8 1659 307 267 0 143 chrX 140877261 140877300 -25772996 + B1F1 SINE Alu 59 92 -57 8 1659 1314 138 60 23 chrX 140877300 140877516 -25772780 + URR1A DNA MER1_type 1 224 -2 8 1659 307 267 0 143 chrX 140877516 140877581 -25772715 + B1F1 SINE Alu 93 148 -1 8 1659 300 333 28 0 chrX 140877654 140877762 -25772534 + Tigger5 DNA MER2_type 118 228 -2178 8 1659 926 118 6 22 chrX 140878265 140878447 -25771849 + (GA)n Simple_repeat Simple_repeat 2 180 0 8 1659 240 59 0 0 chrX 140878447 140878481 -25771815 + (CAGAGA)n Simple_repeat Simple_repeat 1 34 0 8 1659 591 224 75 125 chrX 140878706 140878773 -25771523 + MER2 DNA MER2_type 97 163 -182 8 1659 2783 31 9 0 chrX 140878773 140879090 -25771206 - L1Md_F2 LINE L1 -13 6569 6250 8 1659 591 224 75 125 chrX 140879090 140879262 -25771034 + MER2 DNA MER2_type 164 324 -21 8 1659 2933 84 16 3 chrX 140879536 140879916 -25770380 + L1_Mus3 LINE L1 6249 6633 -5 8 1659 1464 140 13 9 chrX 140880160 140880384 -25769912 - URR1B DNA MER1_type 0 225 1 8 1659 23 0 0 0 chrX 140880628 140880651 -25769645 + AT_rich Low_complexity Low_complexity 1 23 0 8 1659 1410 113 113 5 chrX 140881120 140881324 -25768972 - URR1A DNA MER1_type 0 226 1 8 1659 247 282 93 68 chrX 140881813 140881929 -25768367 - MER46C DNA MER2_type -25 313 195 8 1659 263 282 0 0 chrX 140881929 140882000 -25768296 + MER53 DNA hAT 1 71 -122 8 1659 447 270 9 43 chrX 140882047 140882163 -25768133 + PB1D7 SINE Alu 1 112 -8 8 1659 734 329 32 0 chrX 140882175 140882394 -25767902 + Tigger5 DNA MER2_type 17 242 -2164 8 1659 397 254 55 0 chrX 140882390 140882500 -25767796 + Tigger5 DNA MER2_type 2291 2406 0 8 1659 477 253 50 81 chrX 140882737 140882935 -25767361 + MIR SINE MIR 6 197 -65 8 1659 1056 62 0 0 chrX 140883881 140884026 -25766270 + (CAAAC)n Simple_repeat Simple_repeat 5 149 0 8 1659 834 11 0 0 chrX 140884851 140884946 -25765350 + (TTC)n Simple_repeat Simple_repeat 2 96 0 8 1659 1193 59 0 0 chrX 140884946 140885082 -25765214 - B1_Mm SINE Alu -10 137 2 8 1659 376 352 105 14 chrX 140885272 140885491 -25764805 + MIRb SINE MIR 30 268 0 8 1659 248 267 105 13 chrX 140886087 140886163 -25764133 + ID4 SINE ID 1 83 0 8 1659 6743 33 0 5 chrX 140886681 140887433 -25762863 - L1Md_T LINE L1 -3 6579 5832 8 1659 264 167 0 0 chrX 140887634 140887682 -25762614 + (TA)n Simple_repeat Simple_repeat 2 49 0 8 1659 189 374 86 31 chrX 140888465 140888628 -25761668 - L2 LINE L2 -967 2452 2281 8 1659 234 290 43 0 chrX 140888983 140889052 -25761244 + ID4_ SINE ID 1 72 -11 8 1659 396 0 0 0 chrX 140889054 140889098 -25761198 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1659 580 276 42 7 chrX 140889195 140889337 -25760959 + ID_B1 SINE B4 70 216 -8 8 1659 240 208 53 70 chrX 140889292 140889349 -25760947 + PB1D7 SINE Alu 65 120 0 8 1659 264 59 0 0 chrX 140889376 140889410 -25760886 + (CAAAC)n Simple_repeat Simple_repeat 2 35 0 9 1659 206 159 0 22 chrX 140889410 140889455 -25760841 + (CCAA)n Simple_repeat Simple_repeat 2 45 0 9 1659 213 250 0 0 chrX 140889602 140889650 -25760646 + A-rich Low_complexity Low_complexity 1 48 0 9 1659 550 242 67 22 chrX 140890957 140891092 -25759204 + B1F1 SINE Alu 1 141 -8 9 1659 454 314 7 82 chrX 140891103 140891238 -25759058 + ID_B1 SINE B4 5 129 -95 9 1659 429 70 0 0 chrX 140891243 140891300 -25758996 + (CAG)n Simple_repeat Simple_repeat 3 59 0 9 1659 1293 26 0 0 chrX 140891337 140891490 -25758806 + (CTGGGG)n Simple_repeat Simple_repeat 2 154 0 9 1659 334 248 101 4 chrX 140891525 140891623 -25758673 + B1_Mur1 SINE Alu 44 145 -2 9 1659 213 271 21 0 chrX 140891640 140891688 -25758608 + PB1D9 SINE Alu 1 49 -71 9 1659 465 19 0 0 chrX 140891690 140891744 -25758552 + (TG)n Simple_repeat Simple_repeat 1 54 0 9 1659 256 364 12 90 chrX 140891749 140891915 -25758381 + B4 SINE B4 71 223 -69 9 1659 518 239 27 80 chrX 140891769 140891919 -25758377 + B1_Mur1 SINE Alu 6 147 -2 9 1659 369 0 0 0 chrX 140892259 140892300 -25757996 + (TC)n Simple_repeat Simple_repeat 2 42 0 9 1659 303 289 22 67 chrX 140892361 140892450 -25757846 - B3A SINE B2 -5 193 109 9 1659 1503 169 71 146 chrX 140895693 140895921 -25754375 + RLTR30 LTR ERV1 1 202 -177 9 1659 680 40 10 0 chrX 140895921 140896020 -25754276 + L1Md_F3 LINE L1 6471 6570 -14 9 1659 1503 169 71 146 chrX 140896020 140896201 -25754095 + RLTR30 LTR ERV1 203 379 0 9 1659 210 37 0 0 chrX 140897692 140897719 -25752577 + (TTTTC)n Simple_repeat Simple_repeat 1 27 0 9 1659 392 216 10 0 chrX 140897721 140897818 -25752478 + CT-rich Low_complexity Low_complexity 3 100 0 9 1659 23 0 0 0 chrX 140898086 140898109 -25752187 + AT_rich Low_complexity Low_complexity 1 23 0 9 1659 257 333 47 13 chrX 140898109 140898258 -25752038 - MIRc SINE MIR -20 248 95 9 1659 477 0 0 0 chrX 140898266 140898319 -25751977 + (GA)n Simple_repeat Simple_repeat 2 54 0 9 1659 238 322 154 16 chrX 140898432 140898555 -25751741 - MIRb SINE MIR -104 164 25 9 1659 675 0 0 0 chrX 140899523 140899598 -25750698 + (TTCC)n Simple_repeat Simple_repeat 2 76 0 9 1659 352 177 252 30 chrX 140899598 140899744 -25750552 - B2_Mm2 SINE B2 -16 179 2 9 1659 1295 96 11 0 chrX 140899744 140899921 -25750375 - B2_Mm1t SINE B2 -14 179 1 9 1659 262 359 60 60 chrX 140900158 140900324 -25749972 + MIRc SINE MIR 58 223 -45 9 1659 1063 91 32 11 chrX 140902021 140902209 -25748087 - Lx2A LINE L1 0 7008 6817 9 1660 198 0 0 0 chrX 140903066 140903088 -25747208 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 9 1660 252 0 0 0 chrX 140903197 140903225 -25747071 + (T)n Simple_repeat Simple_repeat 1 28 0 9 1660 456 339 54 20 chrX 140903676 140904080 -25746216 - L1M4 LINE L1 -466 5698 5277 9 1660 330 289 109 26 chrX 140904236 140904392 -25745904 - L1M4 LINE L1 -1070 5076 4908 9 1660 33 25 0 0 chrX 140904426 140904466 -25745830 + AT_rich Low_complexity Low_complexity 1 40 0 9 1660 210 71 0 0 chrX 140904561 140904589 -25745707 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 9 1660 988 138 0 0 chrX 140904594 140904739 -25745557 - B1_Mus1 SINE Alu -1 147 3 9 1660 387 269 86 31 chrX 140904850 140905060 -25745236 - L1MA4 LINE L1 -206 6094 5891 9 1660 357 325 82 19 chrX 140905279 140905486 -25744810 - L1MEg2 LINE L1 -6055 397 178 9 1660 343 353 111 15 chrX 140906246 140906584 -25743712 - L1ME2 LINE L1 -21 6143 5774 9 1660 7018 62 0 1 chrX 140907291 140908209 -25742087 - L1_Mus1 LINE L1 -1 6566 5650 9 1660 655 24 0 0 chrX 140911821 140911906 -25738390 - L1Md_T LINE L1 0 6582 6498 9 1660 2512 78 43 0 chrX 140912280 140912628 -25737668 + Lx LINE L1 6292 6654 0 9 1660 701 363 28 42 chrX 140912654 140913008 -25737288 - ORR1E LTR MaLR -10 349 1 9 1660 684 285 101 35 chrX 140913008 140913252 -25737044 - MTE-int LTR MaLR -53 1527 1267 9 1660 466 112 0 12 chrX 140913430 140913511 -25736785 + L1_Mus2 LINE L1 6486 6565 -1 9 1660 214 268 0 18 chrX 140913616 140913673 -25736623 + B4A SINE B4 3 58 -234 9 1660 6916 39 0 2 chrX 140913673 140914507 -25735789 + L1Md_F2 LINE L1 5751 6582 0 9 1660 21 0 0 0 chrX 140914635 140914656 -25735640 + AT_rich Low_complexity Low_complexity 1 21 0 9 1660 939 208 66 0 chrX 140914733 140914930 -25735366 - B3 SINE B2 -6 210 1 9 1660 286 331 67 30 chrX 140914936 140915101 -25735195 + Charlie13a DNA Charlie 142 312 -1202 9 1660 555 285 109 0 chrX 140916157 140916350 -25733946 - MIRb SINE MIR -29 239 26 9 1660 535 312 42 0 chrX 140916962 140917106 -25733190 + ID_B1 SINE B4 5 154 -70 9 1660 749 153 11 33 chrX 140917107 140917289 -25733007 + (TA)n Simple_repeat Simple_repeat 2 179 0 9 1660 357 82 0 0 chrX 140917319 140917368 -25732928 + (CA)n Simple_repeat Simple_repeat 2 50 0 9 1660 242 214 70 18 chrX 140918667 140918724 -25731572 + MTEa LTR MaLR 11 70 -309 9 1660 316 348 0 26 chrX 140918789 140918904 -25731392 + B3 SINE B2 5 116 -100 9 1660 364 208 36 135 chrX 140918868 140918910 -25731386 + PB1D10 SINE Alu 11 41 -76 9 1660 4741 116 44 4 chrX 140918910 140919619 -25730677 + RMER19A LTR ERVK 1 737 0 9 1660 364 231 45 118 chrX 140919619 140919703 -25730593 + PB1D10 SINE Alu 39 125 -24 9 1660 277 292 0 14 chrX 140919699 140919772 -25730524 + B4 SINE B4 12 83 -209 9 1660 16914 84 5 7 chrX 140920186 140922540 -25727756 - L1_Mus1 LINE L1 0 6567 4210 9 1660 240 35 0 0 chrX 140922540 140922569 -25727727 + (TA)n Simple_repeat Simple_repeat 1 29 0 9 1660 16914 96 8 9 chrX 140922569 140923268 -25727028 - L1_Mus1 LINE L1 -1674 4209 3513 9 1660 1482 62 0 20 chrX 140923268 140923465 -25726831 + B2_Mm2 SINE B2 1 193 -2 9 1660 16914 96 8 9 chrX 140923465 140923675 -25726621 - L1_Mus1 LINE L1 -2371 3512 3312 9 1660 288 320 54 32 chrX 140923870 140924056 -25726240 + MTEa LTR MaLR 175 379 0 9 1660 263 175 0 0 chrX 140924201 140924241 -25726055 - PB1D7 SINE Alu -7 113 74 9 1660 599 266 109 26 chrX 140924353 140924546 -25725750 - MER58A DNA MER1_type -15 209 1 9 1660 295 251 50 46 chrX 140924546 140924655 -25725641 + LTR37A LTR ERV1 316 467 -1 9 1660 1038 296 44 0 chrX 140926399 140926649 -25723647 + B4A SINE B4 1 261 -31 9 1660 207 355 98 6 chrX 140926801 140926974 -25723322 - MIR SINE MIR -2 260 72 9 1660 333 0 0 0 chrX 140926986 140927023 -25723273 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 1660 2000 351 94 42 chrX 140927869 140928828 -25721468 - MLT1A1-int LTR MaLR -265 1470 462 9 1660 2560 305 47 21 chrX 140928833 140929754 -25720542 + Lx8 LINE L1 6221 7165 -308 9 1660 601 283 10 171 chrX 140930188 140930575 -25719721 - MLT1A1-int LTR MaLR -1398 337 13 9 1660 437 274 50 44 chrX 140930587 140930747 -25719549 - MLT1A1 LTR MaLR -2 406 246 9 1660 180 0 0 0 chrX 140930774 140930794 -25719502 + (CAAG)n Simple_repeat Simple_repeat 3 22 0 9 1660 200 31 62 0 chrX 140930975 140931007 -25719289 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 9 1660 434 311 0 56 chrX 140931082 140931208 -25719088 + ID_B1 SINE B4 90 208 -16 9 1660 557 292 74 82 chrX 140932359 140932693 -25717603 + ORR1E LTR MaLR 19 377 -2 9 1660 185 94 31 0 chrX 140932701 140932733 -25717563 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1660 571 95 21 10 chrX 140934427 140934523 -25715773 + (GAAA)n Simple_repeat Simple_repeat 4 100 0 9 1660 406 274 0 33 chrX 140938088 140938209 -25712087 + PB1D9 SINE Alu 4 120 0 9 1660 215 245 20 0 chrX 140938230 140938279 -25712017 + GA-rich Low_complexity Low_complexity 3 52 0 9 1660 686 272 41 16 chrX 140939553 140939747 -25710549 + B3 SINE B2 11 209 -7 9 1660 273 337 0 0 chrX 140940038 140940127 -25710169 - L2a LINE L2 0 3426 3338 9 1660 263 333 53 0 chrX 140940366 140940441 -25709855 + ID4_ SINE ID 1 79 -4 9 1660 232 337 40 10 chrX 140940567 140940701 -25709595 - L2a LINE L2 -419 3000 2859 9 1660 4157 223 50 11 chrX 140940719 140941672 -25708624 + Lx7 LINE L1 6485 7474 -222 9 1660 268 228 140 0 chrX 140941696 140941810 -25708486 + Lx7 LINE L1 7567 7696 0 9 1660 306 333 40 26 chrX 140941859 140942010 -25708286 + RMER1B Other Other 1 153 -913 9 1660 629 329 5 63 chrX 140942210 140942577 -25707719 + RMER1C Other Other 419 764 -578 9 1660 1301 226 59 21 chrX 140942656 140942995 -25707301 + RMER1B Other Other 565 916 -150 9 1660 496 176 38 10 chrX 140943186 140943315 -25706981 + RMER1B Other Other 939 1051 -15 9 1660 1061 94 12 12 chrX 140943397 140943548 -25706748 + B2_Mm2 SINE B2 11 163 -32 9 1660 288 0 0 0 chrX 140943548 140943580 -25706716 + (CAAT)n Simple_repeat Simple_repeat 2 33 0 9 1660 316 317 108 57 chrX 140945355 140945549 -25704747 + L1MC LINE L1 5588 5791 -2091 9 1660 504 205 180 0 chrX 140945625 140945644 -25704652 - B1_Mur4 SINE Alu -5 145 127 9 1660 405 0 0 0 chrX 140945644 140945689 -25704607 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1660 504 205 180 0 chrX 140945689 140945791 -25704505 - B1_Mur4 SINE Alu -24 126 4 9 1660 4054 86 30 15 chrX 140945836 140946427 -25703869 + L1_Mus3 LINE L1 6038 6637 -1 9 1660 22 56 0 0 chrX 140947165 140947201 -25703095 + AT_rich Low_complexity Low_complexity 1 36 0 9 1660 2099 145 57 16 chrX 140947201 140947314 -25702982 - Lx2B LINE L1 -5 6995 6883 9 1660 255 61 0 0 chrX 140947314 140947347 -25702949 + (CCCA)n Simple_repeat Simple_repeat 1 33 0 9 1660 2099 145 57 16 chrX 140947347 140947605 -25702691 - Lx2B LINE L1 -118 6882 6610 9 1660 286 287 64 14 chrX 140947757 140947926 -25702370 - Lx7 LINE L1 -145 7328 7142 9 1660 359 302 10 0 chrX 140947928 140948024 -25702272 - ID_B1 SINE B4 -11 213 117 9 1660 231 284 44 97 chrX 140948024 140948041 -25702255 - B1F SINE Alu -11 138 32 9 1660 236 291 29 0 chrX 140948533 140948636 -25701660 + L1MA10 LINE L1 6225 6330 -4 9 1660 254 140 0 91 chrX 140948779 140948834 -25701462 - BGLII LTR ERVK 0 421 372 9 1660 1108 294 19 8 chrX 140948902 140949272 -25701024 + MTEa LTR MaLR 4 377 -2 9 1660 333 240 44 80 chrX 140949431 140949544 -25700752 - MIRc SINE MIR -74 194 86 9 1660 2495 63 0 3 chrX 140949552 140949868 -25700428 - L1_Mus1 LINE L1 0 6567 6253 9 1660 2177 68 0 0 chrX 140949868 140950154 -25700142 + L1_Mus1 LINE L1 5831 6116 -451 9 1660 1352 54 5 36 chrX 140950197 140950389 -25699907 - L1_Mus1 LINE L1 0 6567 6382 9 1660 648 249 55 44 chrX 140950433 140950614 -25699682 - B3A SINE B2 -15 183 1 9 1660 759 69 110 17 chrX 140950668 140950786 -25699510 - L1_Mus1 LINE L1 -1 6566 6438 1 1660 776 313 10 55 chrX 140950892 140951183 -25699113 - B4A SINE B4 -14 278 1 1 1660 545 311 33 17 chrX 140951244 140951424 -25698872 - MIR SINE MIR -14 248 66 1 1660 293 152 0 0 chrX 140951606 140951652 -25698644 + A-rich Low_complexity Low_complexity 1 46 0 1 1660 273 263 29 48 chrX 140952220 140952324 -25697972 - MIRc SINE MIR -43 225 124 1 1660 391 302 74 105 chrX 140952575 140952967 -25697329 + MLT1B LTR MaLR 11 390 0 1 1660 588 29 0 0 chrX 140953432 140953502 -25696794 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1660 3396 223 52 30 chrX 140955070 140955955 -25694341 - RCHARR1 DNA MER1_type -3 971 68 1 1660 639 316 31 31 chrX 140955986 140956182 -25694114 - B3A SINE B2 -2 196 1 1 1660 296 309 102 48 chrX 140956253 140956338 -25693958 + MIRb SINE MIR 57 155 -113 1 1660 237 65 0 0 chrX 140956338 140956369 -25693927 + (CTA)n Simple_repeat Simple_repeat 1 31 0 1 1660 296 309 102 48 chrX 140956369 140956470 -25693826 + MIRb SINE MIR 156 253 -15 1 1660 321 238 60 93 chrX 140956827 140956979 -25693317 + MLT1A1 LTR MaLR 203 392 -16 1 1660 581 283 5 16 chrX 140957143 140957333 -25692963 - MER5A DNA MER1_type 0 189 2 1 1660 222 62 0 0 chrX 140958420 140958452 -25691844 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 1660 303 255 124 29 chrX 140958566 140958671 -25691625 + MIRb SINE MIR 20 134 -134 1 1660 648 303 14 18 chrX 140959008 140959230 -25691066 + ID_B1 SINE B4 1 221 -3 1 1660 324 0 0 0 chrX 140959531 140959567 -25690729 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 1660 248 278 126 34 chrX 140959661 140959780 -25690516 - MIRc SINE MIR -23 245 116 1 1660 449 295 159 33 chrX 140960184 140960366 -25689930 + MTC LTR MaLR 1 205 -214 1 1660 839 69 0 127 chrX 140960376 140960526 -25689770 + B1_Mus2 SINE Alu 17 147 0 1 1660 660 209 175 6 chrX 140960553 140960736 -25689560 + MTC LTR MaLR 194 407 -14 1 1660 362 21 21 0 chrX 140961177 140961224 -25689072 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1660 586 282 49 71 chrX 140961280 140961463 -25688833 - B4A SINE B4 -113 179 1 1 1660 208 304 75 69 chrX 140961756 140961915 -25688381 + L2a LINE L2 3265 3424 -2 1 1660 1160 46 46 0 chrX 140962511 140962664 -25687632 - L1_Mus1 LINE L1 0 6567 6408 1 1660 30308 118 25 11 chrX 140962700 140965524 -25684772 + L1_Mus1 LINE L1 355 3246 -2637 1 1660 2177 37 4 4 chrX 140965524 140965792 -25684504 - L1Md_F2 LINE L1 -12 6570 6303 1 1660 30308 87 4 8 chrX 140965792 140969155 -25681141 + L1_Mus1 LINE L1 3247 6566 -1 1 1660 956 146 12 0 chrX 140969383 140969548 -25680748 - L1_Mus3 LINE L1 0 6638 6472 1 1660 211 222 0 0 chrX 140969868 140969904 -25680392 - MIRm SINE MIR -28 248 213 1 1660 387 0 0 0 chrX 140971174 140971217 -25679079 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1660 554 224 28 0 chrX 140971640 140971747 -25678549 - PB1D10 SINE Alu -7 110 1 1 1660 297 365 93 32 chrX 140971846 140972157 -25678139 - L3 LINE CR1 -57 4432 4103 1 1660 792 240 31 22 chrX 140972168 140972394 -25677902 + Lx7 LINE L1 6616 6843 -853 1 1660 216 321 138 29 chrX 140972400 140972538 -25677758 + L2c LINE L2 3257 3409 -17 1 1660 1097 47 0 2 chrX 140973339 140973489 -25676807 + L1Md_T LINE L1 5458 5615 -565 1 1660 8396 37 0 0 chrX 140973489 140974484 -25675812 + L1Md_T LINE L1 5587 6581 -1 1 1660 1077 114 5 16 chrX 140974578 140974765 -25675531 + L1_Mus3 LINE L1 6448 6632 -6 1 1660 3134 65 5 0 chrX 140975325 140975723 -25674573 + MTB LTR MaLR 1 400 0 1 1660 6161 97 28 73 chrX 140975734 140976825 -25673471 + MTB-int LTR MaLR 58 1098 0 1 1660 1423 58 5 5 chrX 140976825 140977016 -25673280 + MTB LTR MaLR 1 191 -209 1 1660 3186 58 7 10 chrX 140977016 140977431 -25672865 + L1Md_F2 LINE L1 6159 6572 -10 1 1660 465 66 0 0 chrX 140977493 140977554 -25672742 + (GAAA)n Simple_repeat Simple_repeat 2 62 0 1 1660 1725 64 0 0 chrX 140977554 140977773 -25672523 + MTB LTR MaLR 182 400 0 1 1660 23 0 0 0 chrX 140977783 140977806 -25672490 + AT_rich Low_complexity Low_complexity 1 23 0 1 1660 255 277 117 51 chrX 140978445 140978463 -25671833 + ID_B1 SINE B4 79 212 -12 1 1660 581 179 8 33 chrX 140978463 140978568 -25671728 + B1_Mur2 SINE Alu 32 137 -12 1 1660 189 74 0 0 chrX 140978568 140978595 -25671701 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 1 1660 255 277 117 51 chrX 140978595 140978608 -25671688 + ID_B1 SINE B4 213 224 0 1 1660 303 192 0 0 chrX 140978611 140978684 -25671612 + (CAGAGA)n Simple_repeat Simple_repeat 2 74 0 1 1660 474 18 0 0 chrX 140978708 140978763 -25671533 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 1660 359 269 0 13 chrX 140978995 140979074 -25671222 - MER5B DNA MER1_type 0 178 101 1 1660 32675 67 4 8 chrX 140979115 140984284 -25666012 + L1Md_F3 LINE L1 441 5586 -297 1 1660 8322 35 2 2 chrX 140984284 140985282 -25665014 + L1Md_F3 LINE L1 5587 6584 0 1 1660 6022 31 1 0 chrX 140985568 140986274 -25664022 - L1Md_T LINE L1 0 6582 5876 1 1660 378 0 0 0 chrX 140986618 140986660 -25663636 + (TA)n Simple_repeat Simple_repeat 1 42 0 1 1660 528 198 38 51 chrX 140987290 140987425 -25662871 - B1_Mur1 SINE Alu 0 149 6 1 1660 368 324 57 64 chrX 140987591 140987855 -25662441 - L1ME4a LINE L1 -292 5832 5571 1 1660 1673 56 23 0 chrX 140987879 140988094 -25662202 - L1_Mus1 LINE L1 0 6567 6348 1 1660 437 242 11 0 chrX 140988433 140988524 -25661772 - ID_B1 SINE B4 -2 222 131 1 1660 385 252 38 28 chrX 140988524 140988539 -25661757 - B1F SINE Alu -2 147 41 1 1660 32 0 0 0 chrX 140990239 140990271 -25660025 + AT_rich Low_complexity Low_complexity 1 32 0 1 1660 189 314 142 30 chrX 140993057 140993254 -25657042 - MIRc SINE MIR -31 237 19 1 1660 640 308 79 26 chrX 140993277 140993814 -25656482 - L1M3 LINE L1 -907 5236 4621 1 1660 296 232 116 0 chrX 140993837 140993975 -25656321 - L1MA8 LINE L1 -50 6241 6088 1 1660 1391 67 31 0 chrX 140993975 140994169 -25656127 - L1_Mus3 LINE L1 -6 6632 6433 1 1660 568 327 6 36 chrX 140994181 140994349 -25655947 - RSINE1 SINE B4 0 165 3 1 1660 684 256 59 17 chrX 140994349 140994639 -25655657 - L1M3 LINE L1 -1488 4652 4351 1 1660 426 259 88 39 chrX 140995474 140995679 -25654617 + MER63D DNA AcHobo 47 261 -800 1 1660 367 269 26 9 chrX 140995723 140995839 -25654457 + MER63D DNA AcHobo 345 462 -599 1 1660 400 300 164 11 chrX 140995845 140996125 -25654171 + L1MEc LINE L1 30 352 -6048 1 1660 385 328 151 16 chrX 140996245 140996496 -25653800 + L1MEc LINE L1 498 782 -5618 1 1660 499 278 5 50 chrX 140996558 140996778 -25653518 + L1M4 LINE L1 41 250 -6292 1 1660 1683 64 4 29 chrX 140996989 140997064 -25653232 - L1Md_F2 LINE L1 -1 6581 6511 1 1660 3279 43 8 0 chrX 140997064 140997457 -25652839 - MTA_Mm LTR MaLR 0 396 1 1 1660 1683 64 4 29 chrX 140997457 140997621 -25652675 - L1Md_F2 LINE L1 -72 6510 6348 1 1660 371 158 0 0 chrX 140997625 140997682 -25652614 - B3A SINE B2 -141 57 1 1 1660 293 100 20 0 chrX 140997853 140997903 -25652393 + (TATG)n Simple_repeat Simple_repeat 4 54 0 1 1660 2752 302 70 21 chrX 140997923 140999132 -25651164 + Lx9 LINE L1 6357 7624 -20 1 1660 310 320 0 0 chrX 140999236 140999314 -25650982 - ID4 SINE ID -4 79 2 1 1660 265 262 210 16 chrX 140999322 140999446 -25650850 - B1F1 SINE Alu 0 149 2 1 1660 1322 219 11 43 chrX 140999631 140999999 -25650297 + L1_Rod LINE L1 4824 5179 -668 1 1660 1360 221 241 15 chrX 141000000 141000558 -25649738 + Lx8 LINE L1 5181 5893 -1580 1 1660 579 190 0 33 chrX 141000571 141000691 -25649605 + L1_Rod LINE L1 5520 5635 -212 2 1660 240 349 36 12 chrX 141000736 141000904 -25649392 + L1M4 LINE L1 696 867 -5675 3 1660 528 308 78 12 chrX 141001048 141001569 -25648727 + L1MA9 LINE L1 5648 6207 -127 4 1660 747 289 20 30 chrX 141001587 141001787 -25648509 - B3A SINE B2 0 198 1 5 1660 316 274 32 0 chrX 141001787 141001911 -25648385 + L1MA9 LINE L1 6199 6326 -8 4 1660 1059 112 13 0 chrX 141001972 141002124 -25648172 + B2_Mm2 SINE B2 5 158 -37 6 1660 180 0 0 0 chrX 141002124 141002144 -25648152 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 7 1660 1950 282 102 41 chrX 141002167 141002274 -25648022 + L1M4 LINE L1 4397 4487 -2157 3 1660 2935 93 17 2 chrX 141002274 141002684 -25647612 - Lx3_Mus LINE L1 -8 7001 6586 8 1660 1950 282 102 41 chrX 141002684 141003905 -25646391 + L1M4 LINE L1 4488 5806 -838 3 1660 1073 112 65 6 chrX 141003910 141004080 -25646216 + B2_Mm2 SINE B2 1 180 -15 9 1660 228 67 0 0 chrX 141004080 141004110 -25646186 + (TTC)n Simple_repeat Simple_repeat 2 31 0 1 1660 361 349 86 68 chrX 141004185 141004536 -25645760 + Lx8 LINE L1 7093 7449 -24 1 1660 396 0 0 0 chrX 141004623 141004667 -25645629 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 1660 1200 105 6 0 chrX 141004727 141004930 -25645366 - L1Md_F2 LINE L1 0 6582 6385 1 1660 509 282 78 9 chrX 141004966 141005184 -25645112 + L1M4 LINE L1 5346 5578 -596 1 1660 256 79 0 0 chrX 141005187 141005225 -25645071 + URR1B DNA MER1_type 182 219 -6 1 1660 681 294 84 11 chrX 141005387 141005980 -25644316 - L1PB4 LINE L1 -283 6017 5363 1 1660 344 311 165 13 chrX 141006107 141006416 -25643880 + L1MEc LINE L1 991 1346 -5054 1 1660 450 49 0 0 chrX 141006419 141006480 -25643816 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1660 246 298 12 0 chrX 141006493 141006577 -25643719 + L1MEc LINE L1 1375 1459 -4941 1 1660 225 259 0 24 chrX 141006805 141006888 -25643408 + L1_Rod LINE L1 5143 5223 -624 1 1660 416 304 155 0 chrX 141006957 141007151 -25643145 + L1MEc LINE L1 1654 1877 -4523 1 1660 1401 249 69 14 chrX 141007153 141007503 -25642793 + MTE2b LTR MaLR 4 372 -7 2 1660 204 93 54 36 chrX 141007646 141007702 -25642594 + (TTATA)n Simple_repeat Simple_repeat 5 61 0 2 1660 23 33 0 0 chrX 141007770 141007800 -25642496 + AT_rich Low_complexity Low_complexity 1 30 0 2 1660 1385 259 53 14 chrX 141008028 141008385 -25641911 + MTE2a LTR MaLR 1 371 -8 2 1660 2665 289 96 46 chrX 141008389 141009745 -25640551 - ERVL-B4-int LTR ERVL -3214 2500 1077 2 1660 304 315 20 87 chrX 141009829 141010024 -25640272 - ERVL-B4-int LTR ERVL -4849 865 684 2 1660 277 264 0 53 chrX 141011686 141011762 -25638534 + B1F1 SINE Alu 78 149 0 2 1660 450 281 0 46 chrX 141011796 141011949 -25638347 + L1MA10 LINE L1 6182 6327 -7 2 1660 23 33 0 0 chrX 141011956 141011986 -25638310 + AT_rich Low_complexity Low_complexity 1 30 0 2 1660 760 305 58 25 chrX 141012561 141012630 -25637666 + MER2 DNA MER2_type 59 134 -211 2 1660 1360 156 9 0 chrX 141012630 141012854 -25637442 - URR1A DNA MER1_type 0 226 1 2 1660 760 305 58 25 chrX 141012854 141013060 -25637236 + MER2 DNA MER2_type 135 343 -2 2 1660 214 299 98 104 chrX 141013463 141013531 -25636765 + MIR SINE MIR 80 146 -116 3 1660 1055 212 19 19 chrX 141013531 141013742 -25636554 - B3 SINE B2 -5 211 1 3 1660 214 299 98 104 chrX 141013742 141013856 -25636440 + MIR SINE MIR 147 261 -1 3 1660 263 331 66 66 chrX 141013959 141014156 -25636140 + L2 LINE L2 2628 2824 -595 3 1660 852 122 0 13 chrX 141014185 141014343 -25635953 + L1_Mus4 LINE L1 6479 6634 -2 3 1660 374 300 29 38 chrX 141014952 141015065 -25635231 + PB1D7 SINE Alu 1 113 -7 3 1660 6667 96 26 5 chrX 141015070 141016761 -25633535 + L1VL2 LINE L1 267 1997 -1618 3 1660 1826 97 0 0 chrX 141016761 141017050 -25633246 - L1Md_F LINE L1 -2141 3742 3454 3 1660 1208 79 0 6 chrX 141017051 141017230 -25633066 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 3 1660 7510 31 13 0 chrX 141017234 141018163 -25632133 - L1Md_F2 LINE L1 -13 6569 5629 3 1660 13698 138 35 13 chrX 141018162 141021731 -25628565 - L1Md_F LINE L1 -2438 3445 98 3 1660 5320 93 10 0 chrX 141021749 141022558 -25627738 + MusHAL1 LINE L1 1095 1911 -801 3 1660 592 98 26 35 chrX 141022558 141022674 -25627622 + Lx LINE L1 6536 6650 -4 4 1660 378 0 0 0 chrX 141022749 141022791 -25627505 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 4 1660 647 249 72 13 chrX 141022827 141023118 -25627178 + L1MA4 LINE L1 5601 5936 -364 4 1660 649 246 145 16 chrX 141023474 141023660 -25626636 + B3 SINE B2 2 211 -5 4 1660 33826 44 0 3 chrX 141023745 141028955 -25621341 + L1Md_T LINE L1 298 5589 -297 4 1660 8510 32 0 0 chrX 141028955 141029951 -25620345 + L1Md_T LINE L1 5590 6585 0 4 1660 184 89 71 43 chrX 141030214 141030284 -25620012 + (CAAA)n Simple_repeat Simple_repeat 2 73 0 4 1660 322 230 78 13 chrX 141030459 141030613 -25619683 - Lx9 LINE L1 -3 7641 7478 4 1660 324 0 0 0 chrX 141030613 141030649 -25619647 + HAL1-3A_ME LINE L1 1977 2012 -846 4 1660 2157 125 22 0 chrX 141031113 141031433 -25618863 + ORR1A2 LTR MaLR 1 327 0 4 1660 185 371 22 33 chrX 141032230 141032322 -25617974 - L2b LINE L2 -57 3318 3228 4 1660 1021 280 17 74 chrX 141032470 141032767 -25617529 - MTE2b LTR MaLR -99 280 1 5 1660 420 224 112 0 chrX 141033334 141033432 -25616864 + PB1D7 SINE Alu 9 117 -3 5 1661 233 328 126 51 chrX 141033541 141033756 -25616540 - MIRb SINE MIR -12 256 26 5 1661 594 275 85 58 chrX 141033911 141034135 -25616161 + B4A SINE B4 1 230 -62 5 1661 266 148 19 0 chrX 141034137 141034191 -25616105 + CT-rich Low_complexity Low_complexity 2 56 0 5 1661 385 183 9 9 chrX 141034195 141034300 -25615996 + (CA)n Simple_repeat Simple_repeat 1 105 0 5 1661 587 314 7 35 chrX 141034341 141034486 -25615810 + RSINE1 SINE B4 8 148 -17 5 1661 489 256 100 15 chrX 141034607 141034738 -25615558 + PB1D10 SINE Alu 7 149 0 5 1661 264 288 41 0 chrX 141035256 141035329 -25614967 - ID4_ SINE ID -6 77 2 5 1661 471 284 37 78 chrX 141035915 141036106 -25614190 + MER5A DNA MER1_type 7 189 0 5 1661 27 0 0 0 chrX 141036287 141036314 -25613982 + AT_rich Low_complexity Low_complexity 1 27 0 6 1661 262 247 68 93 chrX 141036427 141036632 -25613664 + Lx9 LINE L1 7412 7611 -33 6 1661 266 260 48 39 chrX 141037053 141037157 -25613139 - MLT1A LTR MaLR -203 171 67 6 1661 2488 140 32 8 chrX 141037339 141037807 -25612489 - L1_Mur2 LINE L1 -468 5409 4931 6 1661 4123 82 2 0 chrX 141037807 141038344 -25611952 + L1_Mus4 LINE L1 6092 6629 -7 6 1661 526 39 26 0 chrX 141038357 141038434 -25611862 + (CAAAC)n Simple_repeat Simple_repeat 2 80 0 6 1661 358 353 101 18 chrX 141039029 141039257 -25611039 - MIR SINE MIR -10 252 6 6 1661 261 0 0 0 chrX 141040577 141040606 -25609690 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1661 770 284 151 12 chrX 141040722 141041047 -25609249 + ORR1D2 LTR MaLR 1 370 0 6 1661 461 230 159 0 chrX 141041178 141041291 -25609005 - RSINE1 SINE B4 -21 144 14 6 1661 334 272 38 0 chrX 141041475 141041577 -25608719 - B1F SINE Alu 0 149 3 7 1661 188 292 69 0 chrX 141041579 141041651 -25608645 + MIR SINE MIR 184 260 -2 7 1661 624 261 124 14 chrX 141042763 141042973 -25607323 + MIR SINE MIR 12 244 -18 7 1661 190 281 0 34 chrX 141042939 141042998 -25607298 + L2a LINE L2 3369 3425 -1 7 1661 315 0 0 0 chrX 141044194 141044229 -25606067 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1661 369 0 0 0 chrX 141044229 141044269 -25606027 + (GA)n Simple_repeat Simple_repeat 2 42 0 7 1661 3359 166 99 6 chrX 141044432 141044540 -25605756 + Lx4B LINE L1 5081 5189 -688 7 1661 189 0 0 0 chrX 141044540 141044561 -25605735 + (TC)n Simple_repeat Simple_repeat 2 22 0 7 1661 198 0 0 0 chrX 141044561 141044582 -25605714 + (TA)n Simple_repeat Simple_repeat 1 22 0 7 1661 261 0 0 0 chrX 141044582 141044610 -25605686 + (GA)n Simple_repeat Simple_repeat 2 30 0 7 1661 3359 166 99 6 chrX 141044610 141044632 -25605664 + Lx4B LINE L1 5190 5244 -633 7 1661 1659 84 38 0 chrX 141044632 141044869 -25605427 + L1_Mus3 LINE L1 6392 6637 -1 8 1661 7692 151 47 7 chrX 141044869 141046599 -25603697 + Lx4B LINE L1 5245 7040 -18 7 1661 239 351 88 12 chrX 141046870 141047040 -25603256 - MIRb SINE MIR -66 202 20 8 1661 189 107 0 0 chrX 141047089 141047117 -25603179 + (T)n Simple_repeat Simple_repeat 1 28 0 8 1661 293 201 60 42 chrX 141047117 141047283 -25603013 - RMER17C LTR ERVK -150 260 92 8 1661 256 0 0 145 chrX 141047744 141047813 -25602483 + (CAAAAA)n Simple_repeat Simple_repeat 2 60 0 8 1661 198 118 0 0 chrX 141047868 141047902 -25602394 + (TC)n Simple_repeat Simple_repeat 1 34 0 8 1661 247 362 0 21 chrX 141047911 141048007 -25602289 - B4A SINE B4 -16 276 183 8 1661 36312 42 0 3 chrX 141048546 141054924 -25595372 - L1Md_T LINE L1 0 6585 126 8 1661 325 285 57 78 chrX 141054959 141055100 -25595196 + MER5B DNA MER1_type 2 139 -39 8 1661 305 263 34 8 chrX 141055116 141055235 -25595061 - Lx2B LINE L1 -10 6990 6869 8 1661 286 340 159 6 chrX 141055396 141055559 -25594737 - MER5A DNA MER1_type -1 188 1 9 1661 1162 233 31 19 chrX 141056900 141057193 -25593103 - Lx9 LINE L1 -599 7045 6640 9 1661 1735 249 52 77 chrX 141057206 141057348 -25592948 + Lx9 LINE L1 7062 7200 -444 9 1661 5541 66 7 11 chrX 141057348 141058095 -25592201 + L1_Mus3 LINE L1 5895 6638 0 9 1661 1735 249 52 77 chrX 141058095 141058549 -25591747 + Lx9 LINE L1 7201 7643 -1 9 1661 399 299 60 20 chrX 141059246 141059396 -25590900 + MER33 DNA MER1_type 3 158 -166 9 1661 34 42 0 0 chrX 141059704 141059752 -25590544 + AT_rich Low_complexity Low_complexity 1 48 0 9 1661 419 273 79 86 chrX 141059762 141059902 -25590394 - RSINE1 SINE B4 0 165 27 9 1661 21 36 0 0 chrX 141060062 141060090 -25590206 + AT_rich Low_complexity Low_complexity 1 28 0 9 1661 1158 335 70 47 chrX 141060134 141060736 -25589560 - MLT1E3 LTR MaLR 0 624 9 9 1661 432 0 0 0 chrX 141060865 141060913 -25589383 + (TA)n Simple_repeat Simple_repeat 2 49 0 9 1661 477 0 0 0 chrX 141060913 141060965 -25589331 + (TG)n Simple_repeat Simple_repeat 2 54 0 9 1661 198 162 54 0 chrX 141060990 141061027 -25589269 - MIRm SINE MIR -121 155 117 1 1661 524 340 62 40 chrX 141061102 141061374 -25588922 + ORR1E LTR MaLR 3 280 -79 1 1661 1126 260 87 34 chrX 141061374 141061740 -25588556 - MTE2a LTR MaLR -2 417 26 1 1661 1685 29 0 9 chrX 141061740 141061950 -25588346 + L1Md_F2 LINE L1 6363 6570 -12 1 1661 2019 153 45 3 chrX 141063905 141064258 -25586038 - RMER6D LTR ERVK -351 369 2 1 1661 432 287 32 8 chrX 141064792 141064915 -25585381 + L2a LINE L2 3301 3426 0 1 1661 420 191 0 0 chrX 141065047 141065131 -25585165 + A-rich Low_complexity Low_complexity 1 84 0 1 1661 450 32 0 0 chrX 141065323 141065386 -25584910 + L1_Mus3 LINE L1 6569 6631 -7 1 1661 916 272 77 57 chrX 141066307 141066658 -25583638 + MLT2B4 LTR ERVL 1 358 -198 1 1661 795 219 11 6 chrX 141066683 141066862 -25583434 + Lx9 LINE L1 7322 7501 -143 1 1661 379 197 0 0 chrX 141066936 141066997 -25583299 - Lx6 LINE L1 -1010 6450 6390 1 1661 3358 258 62 35 chrX 141066997 141067397 -25582899 + Lx6 LINE L1 6457 6859 -601 1 1661 300 27 0 0 chrX 141067397 141067434 -25582862 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1661 3358 258 62 35 chrX 141067434 141067646 -25582650 + Lx6 LINE L1 6860 7110 -350 1 1661 594 0 0 0 chrX 141067646 141067712 -25582584 + (TC)n Simple_repeat Simple_repeat 2 67 0 1 1661 3358 258 62 35 chrX 141067712 141068065 -25582231 + Lx6 LINE L1 7111 7448 -12 1 1661 442 180 20 0 chrX 141068070 141068170 -25582126 + Lx9 LINE L1 7540 7641 -3 1 1661 639 321 40 49 chrX 141068604 141068974 -25581322 - L1MB5 LINE L1 -12 6162 5796 1 1661 21 107 0 0 chrX 141068996 141069080 -25581216 + AT_rich Low_complexity Low_complexity 1 84 0 1 1661 304 229 62 27 chrX 141069301 141069413 -25580883 + Lx7 LINE L1 7559 7674 -22 1 1661 244 261 170 22 chrX 141069453 141069591 -25580705 - MER47B DNA MER2_type -2124 282 121 1 1661 1175 163 147 48 chrX 141069601 141069764 -25580532 + ORR1C2 LTR MaLR 21 199 -185 1 1661 717 12 0 0 chrX 141069764 141069846 -25580450 + (TC)n Simple_repeat Simple_repeat 1 82 0 1 1661 1175 231 128 49 chrX 141069846 141069986 -25580310 + ORR1C2 LTR MaLR 176 339 -20 1 1661 1736 285 58 31 chrX 141070041 141070772 -25579524 - L1MB4 LINE L1 -5782 863 22 1 1661 558 0 0 0 chrX 141071369 141071431 -25578865 + (TC)n Simple_repeat Simple_repeat 1 62 0 1 1661 21 0 0 0 chrX 141071551 141071572 -25578724 + AT_rich Low_complexity Low_complexity 1 21 0 1 1661 925 275 82 51 chrX 141071580 141072089 -25578207 - Charlie1a DNA MER1_type -144 1311 787 1 1661 982 135 50 17 chrX 141072090 141072271 -25578025 + ORR1C1 LTR MaLR 1 187 -191 1 1661 292 190 25 0 chrX 141072280 141072359 -25577937 + CT-rich Low_complexity Low_complexity 4 84 0 1 1661 626 315 41 15 chrX 141072974 141073245 -25577051 - Tigger15a DNA TcMar -54 661 384 1 1661 1702 158 126 3 chrX 141073349 141073698 -25576598 - Lx9 LINE L1 -8 7636 7245 1 1661 332 396 18 45 chrX 141075571 141075793 -25574503 - LTR16C LTR ERVL -7 482 267 1 1661 298 330 39 0 chrX 141075880 141075983 -25574313 - LTR16C LTR ERVL -354 135 29 1 1661 23 0 0 0 chrX 141076041 141076064 -25574232 + AT_rich Low_complexity Low_complexity 1 23 0 1 1661 2191 119 3 0 chrX 141076088 141076408 -25573888 + ORR1A4 LTR MaLR 1 321 -8 1 1661 453 359 97 5 chrX 141076508 141076704 -25573592 - MIR SINE MIR -13 249 36 1 1661 536 301 82 26 chrX 141076735 141076967 -25573329 - Tigger7 DNA MER2_type -3 2488 2244 1 1661 1064 312 112 0 chrX 141076968 141077333 -25572963 - Tigger7 DNA MER2_type -2082 409 4 1 1661 646 224 139 0 chrX 141078998 141079163 -25571133 + Lx3C LINE L1 6786 6973 -3 1 1661 212 132 53 0 chrX 141079632 141079670 -25570626 + GA-rich Low_complexity Low_complexity 1 40 0 1 1661 486 49 0 0 chrX 141079670 141079731 -25570565 + (GGGA)n Simple_repeat Simple_repeat 2 62 0 1 1661 301 58 39 0 chrX 141080287 141080339 -25569957 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 1 1661 908 32 167 0 chrX 141080349 141080475 -25569821 - B1_Mm SINE Alu 0 147 1 1 1661 235 278 59 49 chrX 141080597 141080699 -25569597 + MIRc SINE MIR 127 229 -39 1 1661 441 0 0 0 chrX 141081109 141081158 -25569138 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1661 982 207 130 24 chrX 141081190 141081354 -25568942 + Lx9 LINE L1 7315 7477 -167 1 1661 375 23 0 0 chrX 141081354 141081398 -25568898 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1661 982 207 130 24 chrX 141081398 141081525 -25568771 + Lx9 LINE L1 7478 7636 -8 1 1661 974 296 94 58 chrX 141081823 141082268 -25568028 + MLT1D LTR MaLR 8 468 -37 1 1661 267 31 0 0 chrX 141082549 141082581 -25567715 + (TTA)n Simple_repeat Simple_repeat 1 32 0 1 1661 428 248 50 17 chrX 141082827 141082946 -25567350 + MER20 DNA MER1_type 96 218 -1 1 1661 438 20 0 0 chrX 141083102 141083153 -25567143 + (TTA)n Simple_repeat Simple_repeat 2 52 0 1 1661 267 114 0 0 chrX 141083734 141083778 -25566518 + (TTA)n Simple_repeat Simple_repeat 1 44 0 1 1661 443 245 19 29 chrX 141083989 141084094 -25566202 - MER5A DNA MER1_type -25 164 61 1 1661 1269 54 5 94 chrX 141084224 141084427 -25565869 - L1_Mus2 LINE L1 0 6566 6382 1 1661 2755 54 111 3 chrX 141084427 141084798 -25565498 + L1_Mus2 LINE L1 5973 6383 -183 1 1661 367 296 0 50 chrX 141084988 141085109 -25565187 - B1F SINE Alu -7 142 28 1 1661 3215 75 0 0 chrX 141085110 141085534 -25564762 + L1Md_T LINE L1 6159 6582 0 1 1661 237 33 0 0 chrX 141086383 141086413 -25563883 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1 1661 261 281 16 0 chrX 141086783 141086847 -25563449 - ID4_ SINE ID -10 73 9 1 1661 234 318 97 35 chrX 141086876 141086990 -25563306 - ID_B1 SINE B4 -13 211 91 1 1661 196 30 29 29 chrX 141087091 141087125 -25563171 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1661 195 224 17 33 chrX 141087401 141087461 -25562835 - L2 LINE L2 -1677 1742 1684 1 1661 536 97 0 11 chrX 141087740 141087834 -25562462 + (TC)n Simple_repeat Simple_repeat 2 94 0 1 1661 213 330 11 32 chrX 141087834 141087928 -25562368 + MIR3 SINE MIR 110 201 -7 1 1661 240 286 48 0 chrX 141088656 141088742 -25561554 + MIR SINE MIR 73 169 -99 1 1661 207 0 0 0 chrX 141089134 141089157 -25561139 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1661 202 333 0 31 chrX 141090016 141090081 -25560215 - MIR SINE MIR -58 150 88 1 1661 441 320 113 0 chrX 141090150 141090353 -25559943 - MIR SINE MIR 0 262 37 1 1661 24 0 0 0 chrX 141091864 141091888 -25558408 + AT_rich Low_complexity Low_complexity 1 24 0 1 1661 658 257 51 99 chrX 141092979 141093354 -25556942 - ORR1E LTR MaLR 0 359 3 1 1661 378 0 0 0 chrX 141093398 141093440 -25556856 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1661 21 36 0 0 chrX 141093918 141093946 -25556350 + AT_rich Low_complexity Low_complexity 1 28 0 1 1661 464 266 27 18 chrX 141094312 141094423 -25555873 + B1F1 SINE Alu 36 147 -2 1 1661 306 0 0 0 chrX 141094475 141094509 -25555787 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 1661 928 193 64 0 chrX 141095372 141095543 -25554753 - B3 SINE B2 -5 211 30 1 1661 1487 249 107 0 chrX 141095541 141095942 -25554354 - RCHARR1 DNA MER1_type -8 966 523 1 1661 351 194 0 0 chrX 141095957 141096050 -25554246 + (TATG)n Simple_repeat Simple_repeat 4 96 0 1 1661 432 326 202 0 chrX 141096051 141096293 -25554003 - B4 SINE B4 0 292 2 1 1661 1608 284 43 22 chrX 141096305 141096813 -25553483 - RCHARR1 DNA MER1_type -452 522 4 1 1661 564 282 102 5 chrX 141096821 141097017 -25553279 + B3 SINE B2 2 216 0 1 1661 203 372 12 0 chrX 141098023 141098109 -25552187 + L2 LINE L2 2520 2606 -813 1 1661 14609 16 2 0 chrX 141098538 141100979 -25549317 - L1Md_T LINE L1 0 6582 4162 1 1661 1763 164 117 8 chrX 141101515 141101883 -25548413 - Lx9 LINE L1 -7 7637 7230 1 1661 2285 187 0 0 chrX 141101912 141102303 -25547993 + Lx9 LINE L1 6813 7203 -441 1 1661 270 364 25 0 chrX 141102309 141102427 -25547869 + MIR SINE MIR 86 206 -56 1 1661 202 317 24 35 chrX 141102738 141102823 -25547473 - MIR SINE MIR -87 175 92 1 1661 488 312 100 0 chrX 141103461 141103621 -25546675 - B3A SINE B2 -18 180 5 1 1661 425 324 19 60 chrX 141103997 141104211 -25546085 - MIRb SINE MIR -32 236 22 1 1661 3408 36 4 126 chrX 141105931 141106472 -25543824 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1661 421 356 107 19 chrX 141106474 141106680 -25543616 - MIR SINE MIR -16 246 23 1 1661 1139 293 52 6 chrX 141106686 141107012 -25543284 - MER58B DNA MER1_type 0 341 1 1 1661 1638 163 142 28 chrX 141107234 141107368 -25542928 - Lx9 LINE L1 0 7644 7478 1 1661 306 0 0 0 chrX 141107368 141107402 -25542894 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 1661 1638 163 142 28 chrX 141107402 141107559 -25542737 - Lx9 LINE L1 -167 7477 7312 1 1661 279 0 0 0 chrX 141107559 141107590 -25542706 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1661 1638 163 142 28 chrX 141107590 141107726 -25542570 - Lx9 LINE L1 -333 7311 7168 1 1661 479 279 68 92 chrX 141107790 141108039 -25542257 + MIRb SINE MIR 26 268 0 1 1661 215 380 78 0 chrX 141108054 141108183 -25542113 + L2 LINE L2 2339 2477 -942 1 1661 674 245 26 36 chrX 141108631 141108826 -25541470 - B3A SINE B2 -5 193 1 1 1661 3850 278 98 95 chrX 141109307 141109620 -25540676 + MTE2b-int LTR MaLR 24 363 -1217 1 1661 2342 0 0 0 chrX 141109620 141109881 -25540415 - L1Md_T LINE L1 0 6582 6322 1 1661 3850 278 98 95 chrX 141109881 141111111 -25539185 + MTE2b-int LTR MaLR 364 1571 -9 1 1661 1374 247 35 32 chrX 141111114 141111490 -25538806 + MTE2b LTR MaLR 1 377 -2 1 1661 42 71 0 0 chrX 141111605 141111689 -25538607 + AT_rich Low_complexity Low_complexity 1 84 0 1 1661 276 336 18 36 chrX 141111689 141111800 -25538496 - MIR SINE MIR -38 224 116 1 1661 6285 54 0 5 chrX 141111993 141112774 -25537522 - L1Md_F2 LINE L1 -19 6563 5787 1 1661 1278 65 6 6 chrX 141112774 141112943 -25537353 - L1_Mus2 LINE L1 -159 6407 6239 1 1661 21 0 0 0 chrX 141112996 141113017 -25537279 + AT_rich Low_complexity Low_complexity 1 21 0 1 1661 280 272 135 51 chrX 141113766 141113944 -25536352 - MER112 DNA MER1_type -63 198 6 1 1661 266 263 13 13 chrX 141114430 141114507 -25535789 + CT-rich Low_complexity Low_complexity 1 77 0 1 1661 289 300 29 0 chrX 141114983 141115053 -25535243 + ID SINE ID 3 74 -150 1 1661 225 359 10 10 chrX 141115053 141115087 -25535209 + BC1_Mm scRNA scRNA 3 106 -46 1 1661 1042 265 74 71 chrX 141115106 141115472 -25534824 + MTEa LTR MaLR 1 367 -12 2 1661 634 260 0 27 chrX 141115479 141115621 -25534675 - Tigger7 DNA MER2_type -8 2483 2346 2 1661 903 229 64 30 chrX 141115621 141115824 -25534472 + B3 SINE B2 4 213 -3 2 1661 905 246 4 34 chrX 141115870 141116106 -25534190 - Tigger7 DNA MER2_type -127 2364 2136 2 1661 934 325 50 0 chrX 141116110 141116393 -25533903 - Tigger7 DNA MER2_type -2183 308 12 2 1661 27 49 0 0 chrX 141116623 141116664 -25533632 + AT_rich Low_complexity Low_complexity 1 41 0 2 1661 431 309 17 58 chrX 141116695 141116867 -25533429 + MLT1E2 LTR MaLR 1 165 -462 2 1661 353 346 0 0 chrX 141116896 141117055 -25533241 + L1MA6 LINE L1 6102 6260 -40 2 1661 698 341 79 72 chrX 141117103 141117520 -25532776 + MLT1E2 LTR MaLR 206 625 -2 2 1661 229 342 110 55 chrX 141117932 141118096 -25532200 + MIRb SINE MIR 96 268 0 2 1661 24 0 0 0 chrX 141118250 141118274 -25532022 + AT_rich Low_complexity Low_complexity 1 24 0 2 1661 231 125 0 0 chrX 141118450 141118490 -25531806 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1661 492 288 44 25 chrX 141118508 141118668 -25531628 - RSINE1 SINE B4 -2 163 1 2 1661 423 259 0 25 chrX 141118719 141118838 -25531458 + PB1D10 SINE Alu 1 116 -1 2 1661 354 340 11 0 chrX 141118979 141119098 -25531198 + MIR SINE MIR 44 164 -104 2 1661 21 0 0 0 chrX 141119271 141119292 -25531004 + AT_rich Low_complexity Low_complexity 1 21 0 2 1661 387 0 0 0 chrX 141123227 141123270 -25527026 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1661 331 145 29 0 chrX 141123270 141123339 -25526957 + GA-rich Low_complexity Low_complexity 4 74 0 2 1661 1118 82 0 7 chrX 141125813 141125961 -25524335 + B1_Mus1 SINE Alu 2 148 0 2 1661 450 342 45 40 chrX 141126035 141126236 -25524060 - MER20 DNA MER1_type -17 202 1 2 1661 343 304 8 64 chrX 141127680 141127839 -25522457 - L1M4c LINE L1 -1147 5232 5081 2 1661 530 325 112 21 chrX 141127907 141128467 -25521829 - L1M4c LINE L1 -1287 5095 4485 2 1661 641 55 0 16 chrX 141128490 141128589 -25521707 + B1_Mus2 SINE Alu 56 149 0 2 1661 814 295 81 41 chrX 141128596 141129162 -25521134 - L1M4c LINE L1 -1920 4462 3874 2 1661 306 343 126 7 chrX 141129221 141129244 -25521052 - RSINE1 SINE B4 -2 163 141 2 1661 513 0 0 0 chrX 141129244 141129301 -25520995 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 1661 306 343 126 7 chrX 141129301 141129412 -25520884 - RSINE1 SINE B4 -25 140 14 2 1661 1918 184 53 6 chrX 141129487 141129847 -25520449 - ORR1C1 LTR MaLR 0 378 2 2 1661 413 262 75 68 chrX 141129859 141130125 -25520171 - L1M4c LINE L1 -2658 3718 3451 2 1661 406 288 134 16 chrX 141130425 141130849 -25519447 - L1M4c LINE L1 -2928 3454 2981 2 1661 600 211 0 0 chrX 141130854 141130996 -25519300 + (TA)n Simple_repeat Simple_repeat 2 143 0 2 1661 704 221 14 29 chrX 141131047 141131187 -25519109 + B1_Mur1 SINE Alu 11 148 -1 2 1661 1182 300 71 58 chrX 141131216 141131736 -25518560 + Tigger1 DNA MER2_type 7 533 -1885 2 1661 4696 66 7 2 chrX 141131858 141132466 -25517830 + L1Md_F2 LINE L1 5971 6581 -1 2 1661 338 333 39 39 chrX 141132762 141132915 -25517381 + ID_B1 SINE B4 72 224 0 2 1661 268 317 40 0 chrX 141132959 141133060 -25517236 + Tigger1 DNA MER2_type 538 642 -1776 2 1661 454 130 324 0 chrX 141133060 141133168 -25517128 + Lx2 LINE L1 6853 6995 -2 2 1661 599 200 0 18 chrX 141133224 141133336 -25516960 + B1_Mus2 SINE Alu 1 110 -37 2 1661 3732 16 5 0 chrX 141133565 141133995 -25516301 - L1Md_A LINE L1 0 6582 6151 2 1661 23584 17 3 10 chrX 141133998 141137961 -25512335 - L1Md_A LINE L1 -1923 3960 28 2 1661 1588 274 158 12 chrX 141138016 141138604 -25511692 + Tigger1 DNA MER2_type 1586 2259 -159 2 1661 980 251 77 43 chrX 141138625 141138925 -25511371 - Lx5 LINE L1 -6 7044 6735 2 1661 477 312 25 6 chrX 141138931 141139089 -25511207 + Tigger1 DNA MER2_type 2258 2418 0 2 1661 525 274 180 15 chrX 141139089 141139576 -25510720 - L1M4c LINE L1 -3491 2885 2322 2 1661 252 181 0 0 chrX 141139846 141139929 -25510367 + T-rich Low_complexity Low_complexity 1 83 0 2 1661 760 29 29 0 chrX 141140068 141140170 -25510126 + (TTCTC)n Simple_repeat Simple_repeat 4 108 0 2 1661 677 342 134 35 chrX 141140547 141141264 -25509032 - L2 LINE L2 -639 2780 1993 2 1661 663 255 80 5 chrX 141141825 141142026 -25508270 - B3 SINE B2 0 216 1 2 1661 1055 178 121 33 chrX 141142319 141142626 -25507670 + Lx9 LINE L1 7311 7644 0 2 1661 353 296 14 49 chrX 141142985 141143127 -25507169 + MIR SINE MIR 104 240 -22 2 1661 2063 91 26 35 chrX 141143248 141143588 -25506708 - L1_Mus2 LINE L1 0 6566 6230 2 1661 225 0 0 0 chrX 141143934 141143959 -25506337 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 1661 561 42 0 0 chrX 141144657 141144729 -25505567 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 1661 522 0 0 0 chrX 141144729 141144786 -25505510 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 1661 499 299 67 20 chrX 141144793 141144943 -25505353 - B3A SINE B2 -41 157 1 2 1661 192 40 0 0 chrX 141145558 141145583 -25504713 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2 1661 3435 83 8 10 chrX 141145623 141146109 -25504187 - L1_Mus3 LINE L1 0 6638 6154 2 1661 4362 252 48 84 chrX 141146145 141147557 -25502739 - Lx5 LINE L1 -18 7032 5672 2 1661 758 125 9 0 chrX 141147576 141147688 -25502608 + Lx4A LINE L1 6495 6607 -451 2 1661 2467 94 0 14 chrX 141147666 141147699 -25502597 + L1_Mus2 LINE L1 5816 5843 -723 2 1661 2958 80 0 0 chrX 141147699 141148089 -25502207 - L1_Mus1 LINE L1 -1 6566 6177 2 1661 2467 94 0 14 chrX 141148089 141148410 -25501886 + L1_Mus1 LINE L1 5844 6164 -402 2 1661 2413 157 85 7 chrX 141148410 141148847 -25501449 + Lx4A LINE L1 6588 7058 0 2 1661 3132 153 62 9 chrX 141148858 141149438 -25500858 - L1_Mur2 LINE L1 -201 5676 5066 2 1661 2322 210 42 0 chrX 141149606 141150034 -25500262 - Lx5 LINE L1 -197 6853 6408 2 1661 324 0 0 0 chrX 141150042 141150078 -25500218 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 2 1661 183 325 109 42 chrX 141150841 141150960 -25499336 - L2 LINE L2 -1339 2080 1954 2 1661 343 403 13 0 chrX 141150964 141151113 -25499183 + Tigger5 DNA MER2_type 86 236 -2170 2 1661 353 280 56 0 chrX 141151096 141151221 -25499075 + Tigger5 DNA MER2_type 2275 2406 0 2 1661 226 342 104 13 chrX 141151224 141151301 -25498995 - MLT1J LTR MaLR -201 311 228 2 1661 270 333 64 40 chrX 141151321 141151446 -25498850 - MLT1J LTR MaLR -341 171 44 2 1661 24 0 0 0 chrX 141151526 141151550 -25498746 + AT_rich Low_complexity Low_complexity 1 24 0 2 1661 573 266 100 58 chrX 141152163 141152524 -25497772 + MLT1C LTR MaLR 47 390 0 2 1661 188 308 0 19 chrX 141152654 141152707 -25497589 - MIR SINE MIR -184 78 27 2 1661 344 270 33 75 chrX 141152856 141152976 -25497320 + PB1D10 SINE Alu 3 117 0 2 1661 2600 178 111 95 chrX 141153177 141153879 -25496417 - RMER6D LTR ERVK -7 713 1 2 1661 390 215 210 45 chrX 141154054 141154254 -25496042 - L1MA8 LINE L1 -31 6260 6028 2 1661 3337 125 62 2 chrX 141154350 141154885 -25495411 + RMER2 LTR ERV1 1 567 0 2 1661 1001 60 82 0 chrX 141154917 141155051 -25495245 - B1_Mm SINE Alu -2 145 1 2 1661 536 225 124 23 chrX 141155060 141155278 -25495018 - L1_Rod LINE L1 -997 4850 4611 2 1661 528 262 108 55 chrX 141155548 141155855 -25494441 - L1M4c LINE L1 -2406 3973 3651 2 1661 1456 282 94 20 chrX 141155960 141156724 -25493572 - L1M4c LINE L1 -3231 3148 2328 2 1661 1179 48 0 0 chrX 141156742 141156888 -25493408 - B1_Mm SINE Alu 0 147 2 2 1661 8125 32 1 1 chrX 141157077 141158523 -25491773 - L1Md_F2 LINE L1 -3 6579 5135 2 1661 915 139 223 8 chrX 141158595 141158860 -25491436 - Lx9 LINE L1 -1 7643 7322 2 1661 396 0 0 0 chrX 141158861 141158905 -25491391 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1661 990 235 16 32 chrX 141158957 141159203 -25491093 - Lx9 LINE L1 -459 7185 6944 2 1661 3375 107 27 15 chrX 141159262 141159850 -25490446 - Lx3A LINE L1 -873 6108 5532 2 1661 547 321 88 44 chrX 141160213 141160646 -25489650 + L1ME4a LINE L1 5447 5898 -226 2 1661 785 337 65 46 chrX 141160651 141161203 -25489093 - MLT1F1 LTR MaLR -8 561 1 2 1661 21 71 0 0 chrX 141161314 141161356 -25488940 + AT_rich Low_complexity Low_complexity 1 42 0 2 1661 197 196 18 0 chrX 141161478 141161534 -25488762 + (TA)n Simple_repeat Simple_repeat 1 57 0 2 1661 22 35 0 0 chrX 141162429 141162458 -25487838 + AT_rich Low_complexity Low_complexity 1 29 0 2 1661 24 0 0 0 chrX 141162997 141163021 -25487275 + AT_rich Low_complexity Low_complexity 1 24 0 2 1661 3596 220 12 16 chrX 141163021 141163779 -25486517 - Lx5 LINE L1 -16 7034 6280 2 1661 511 256 36 12 chrX 141163806 141163972 -25486324 + Tigger13a DNA MER2_type 161 330 -441 2 207 421 317 176 67 chrX 141164018 141164823 -25485473 + L1M5 LINE L1 3331 4223 -1923 2 1662 249 230 0 26 chrX 141164992 141165068 -25485228 + L1MB5 LINE L1 3469 3542 -2598 2 1662 232 270 10 82 chrX 141165095 141165192 -25485104 + Charlie10 DNA MER1_type 527 616 -2206 2 1662 403 298 102 29 chrX 141165192 141165506 -25484790 + L1MB5 LINE L1 3724 4060 -2086 2 1662 419 300 78 55 chrX 141165580 141166135 -25484161 + L1MB5 LINE L1 4179 4743 -1403 2 1662 916 160 18 12 chrX 141166135 141166306 -25483990 - Lx3B LINE L1 -2 6971 6800 2 1662 280 330 80 62 chrX 141166306 141166573 -25483723 + L1MB5 LINE L1 4744 5022 -1124 2 1662 416 210 146 46 chrX 141166602 141166842 -25483454 + L1MB5 LINE L1 5127 5390 -756 2 1662 490 258 37 79 chrX 141166967 141167131 -25483165 + B4 SINE B4 128 284 -8 2 1662 296 263 39 11 chrX 141167196 141167318 -25482978 + L1MB5 LINE L1 5485 5609 -562 2 1662 799 301 86 8 chrX 141167333 141167715 -25482581 + L1MB5 LINE L1 5732 6143 -31 2 1662 521 291 82 0 chrX 141167745 141167927 -25482369 + B3 SINE B2 9 205 -11 2 1662 766 201 0 7 chrX 141167964 141168104 -25482192 + B1_Mus1 SINE Alu 1 139 -9 2 1662 270 73 0 0 chrX 141168104 141168145 -25482151 + (CAAG)n Simple_repeat Simple_repeat 2 42 0 2 1662 2557 57 8 20 chrX 141168547 141168903 -25481393 - L1_Mus3 LINE L1 -7 6631 6280 2 1662 4292 107 94 3 chrX 141168904 141169562 -25480734 - RMER19A LTR ERVK -19 718 1 2 1662 226 267 101 40 chrX 141169635 141169834 -25480462 + L1MD LINE L1 3728 3938 -2208 2 1662 428 318 150 62 chrX 141169842 141170281 -25480015 + L1MEc LINE L1 35 512 -5888 2 1662 300 342 74 0 chrX 141170356 141170505 -25479791 + L1MEc LINE L1 499 658 -5742 2 1662 473 353 84 39 chrX 141171191 141171789 -25478507 + L1MEc LINE L1 3666 4290 -2029 2 1662 324 308 100 77 chrX 141171901 141172089 -25478207 + L1MEc LINE L1 4662 4863 -1456 2 1662 273 29 0 0 chrX 141172089 141172123 -25478173 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1662 324 308 100 77 chrX 141172123 141172244 -25478052 + L1MEc LINE L1 4864 4978 -1341 2 1662 283 253 0 12 chrX 141172244 141172324 -25477972 + LTR40b LTR ERVL 378 456 -6 2 1662 912 105 0 0 chrX 141173231 141173383 -25476913 + (GAAA)n Simple_repeat Simple_repeat 1 152 0 2 1662 288 294 29 80 chrX 141174010 141174147 -25476149 - Charlie4z DNA MER1_type -9 158 29 2 1662 789 292 130 32 chrX 141174912 141175385 -25474911 - L1M5 LINE L1 -371 5808 5293 2 1662 279 0 0 0 chrX 141175390 141175421 -25474875 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1662 688 268 0 0 chrX 141175423 141175561 -25474735 - RSINE1 SINE B4 -21 144 7 2 1662 576 254 9 9 chrX 141176274 141176389 -25473907 - ID_B1 SINE B4 -108 116 2 2 1662 521 252 15 23 chrX 141176423 141176553 -25473743 - RSINE1 SINE B4 -35 130 2 2 1662 630 187 16 39 chrX 141176557 141176685 -25473611 - B1_Mur1 SINE Alu -21 128 4 2 1662 242 302 0 152 chrX 141176585 141176710 -25473586 - MT2B LTR ERVL -349 252 147 2 1662 278 229 100 0 chrX 141177156 141177226 -25473070 - ID_B1 SINE B4 -2 222 146 3 1662 221 286 144 45 chrX 141177267 141177399 -25472897 - RSINE1 SINE B4 -10 155 11 3 1662 236 368 0 0 chrX 141177404 141177480 -25472816 - PB1D10 SINE Alu -39 78 3 3 1662 259 342 0 0 chrX 141177412 141177485 -25472811 - ID_B1 SINE B4 -73 151 79 3 1662 291 320 87 27 chrX 141177486 141177944 -25472352 - L1M3 LINE L1 -933 5213 4730 3 1662 552 221 121 51 chrX 141177977 141178234 -25472062 - L1M3 LINE L1 -1708 4432 4158 3 1662 1018 259 128 15 chrX 141178236 141178678 -25471618 + L1MA10 LINE L1 4831 5323 -845 3 1662 243 346 0 0 chrX 141178678 141178756 -25471540 + ID4 SINE ID 5 82 -1 3 1662 643 264 68 43 chrX 141178756 141178882 -25471414 + L1MA10 LINE L1 5324 5459 -709 3 1662 2509 153 24 12 chrX 141178882 141179298 -25470998 - MTC LTR MaLR 0 421 1 3 1662 643 260 69 42 chrX 141179298 141179452 -25470844 + L1MA10 LINE L1 5460 5609 -580 3 1662 23 54 0 0 chrX 141179580 141179617 -25470679 + AT_rich Low_complexity Low_complexity 1 37 0 3 1662 186 337 59 24 chrX 141180179 141180264 -25470032 - L3 LINE CR1 -3368 1121 1034 3 1662 1145 285 108 39 chrX 141180264 141180856 -25469440 + L1MA10 LINE L1 5699 6331 -3 3 1662 301 260 21 103 chrX 141180844 141181009 -25469287 - L1M5 LINE L1 -1394 4752 4600 3 1662 875 307 24 68 chrX 141181127 141181582 -25468714 - L1MD3 LINE L1 -486 7509 7075 3 1662 51 42 0 0 chrX 141181645 141181717 -25468579 + AT_rich Low_complexity Low_complexity 1 72 0 3 1662 228 67 0 0 chrX 141182011 141182041 -25468255 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 3 1662 4455 204 42 17 chrX 141182050 141182795 -25467501 - Lx6 LINE L1 -177 7283 6520 3 1662 324 0 0 0 chrX 141182795 141182831 -25467465 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1662 4455 204 42 17 chrX 141182831 141182982 -25467314 - Lx6 LINE L1 -941 6519 6365 3 1662 565 321 66 27 chrX 141182990 141183291 -25467005 - L1MD3 LINE L1 -1021 6974 6662 3 1662 493 328 296 18 chrX 141183293 141183585 -25466711 - MLT1A0 LTR MaLR -15 375 9 3 1662 428 300 135 34 chrX 141183893 141184526 -25465770 - L1M5 LINE L1 -1570 4576 3877 3 1662 291 28 0 0 chrX 141184617 141184653 -25465643 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1662 570 109 0 0 chrX 141184653 141184754 -25465542 + (GA)n Simple_repeat Simple_repeat 2 102 0 3 1662 1013 228 165 15 chrX 141184768 141185035 -25465261 + MTE2a LTR MaLR 49 355 -24 3 1662 1212 204 9 9 chrX 141185336 141185568 -25464728 - Lx9 LINE L1 -931 6713 6482 3 1662 1565 216 79 9 chrX 141185568 141185983 -25464313 - Lx9 LINE L1 -1728 5916 5438 3 1662 1919 309 121 19 chrX 141185988 141186716 -25463580 - Lx7 LINE L1 -611 7085 6284 3 1662 1783 256 62 10 chrX 141186723 141187329 -25462967 + Lx7 LINE L1 5525 6164 -1532 3 1662 432 0 0 0 chrX 141187329 141187377 -25462919 + (TC)n Simple_repeat Simple_repeat 1 48 0 3 1662 1783 273 83 21 chrX 141187377 141187479 -25462817 + Lx7 LINE L1 6165 6278 -1418 3 1662 201 365 0 0 chrX 141187707 141187759 -25462537 - MER5A DNA MER1_type -55 134 83 3 1662 275 363 59 0 chrX 141187821 141187956 -25462340 + MER5B DNA MER1_type 9 151 -27 3 1662 8905 116 11 10 chrX 141188442 141190639 -25459657 + L1_Mus3 LINE L1 432 2630 -3253 3 1662 8511 62 4 1 chrX 141190642 141192421 -25457875 - L1Md_F2 LINE L1 -4 6578 4795 3 1662 20702 121 13 3 chrX 141192420 141196393 -25453903 + L1_Mus3 LINE L1 2619 6632 -6 3 1662 8887 11 0 0 chrX 141196438 141197649 -25452647 - L1Md_T LINE L1 0 6582 5372 3 1662 1838 35 0 8 chrX 141197648 141197882 -25452414 + L1Md_T LINE L1 5149 5380 -503 3 1662 21 36 0 0 chrX 141197924 141197952 -25452344 + AT_rich Low_complexity Low_complexity 1 28 0 3 1662 241 369 11 0 chrX 141199071 141199170 -25451126 + MIRc SINE MIR 67 166 -102 3 1662 1107 66 0 0 chrX 141199214 141199351 -25450945 + B1_Mus2 SINE Alu 2 138 -9 3 1662 364 19 38 0 chrX 141199351 141199404 -25450892 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 3 1662 318 118 65 0 chrX 141199480 141199573 -25450723 + (TA)n Simple_repeat Simple_repeat 2 100 0 3 1662 414 53 0 0 chrX 141199876 141199933 -25450363 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 1662 278 348 107 50 chrX 141199998 141200418 -25449878 - L2a LINE L2 -52 3374 2931 3 1662 456 19 0 0 chrX 141202009 141202062 -25448234 + (GA)n Simple_repeat Simple_repeat 1 53 0 3 1662 313 369 24 16 chrX 141202180 141202304 -25447992 + MIRb SINE MIR 15 139 -129 3 1662 385 322 27 27 chrX 141202890 141203037 -25447259 - L2a LINE L2 0 3426 3280 3 1662 216 284 88 69 chrX 141203319 141203421 -25446875 - L2a LINE L2 -39 3387 3284 3 1662 293 339 42 96 chrX 141203450 141203602 -25446694 - L2a LINE L2 -261 3165 3020 3 1662 708 246 43 16 chrX 141203602 141203788 -25446508 - B3A SINE B2 -6 192 2 3 1662 293 339 42 96 chrX 141203788 141203896 -25446400 - L2a LINE L2 -407 3019 2919 3 1662 1104 200 80 0 chrX 141204712 141204937 -25445359 + MTC LTR MaLR 3 245 -176 3 1662 270 155 0 155 chrX 141205110 141205194 -25445102 - U2 snRNA snRNA -117 71 1 3 1662 407 268 31 16 chrX 141206035 141206164 -25444132 + BC1_Mm scRNA scRNA 2 132 -20 3 1662 269 280 13 13 chrX 141206188 141206264 -25444032 + PB1D7 SINE Alu 40 115 -5 3 1662 804 320 54 32 chrX 141207642 141207920 -25442376 - B4 SINE B4 -4 288 5 3 1662 4016 97 13 8 chrX 141207977 141208581 -25441715 - Lx3_Mus LINE L1 -494 6515 5909 3 1662 3305 74 0 0 chrX 141208615 141209076 -25441220 - Lx3_Mus LINE L1 -1090 5919 5462 3 1662 3425 77 23 8 chrX 141209076 141209548 -25440748 + Lx3_Mus LINE L1 6531 7009 0 3 1662 235 338 65 33 chrX 141210452 141210605 -25439691 + Tigger14a DNA MER2_type 167 324 0 3 1662 1152 261 70 34 chrX 141210785 141211142 -25439154 - ORR1D2 LTR MaLR 0 370 1 3 1662 242 324 29 0 chrX 141211172 141211240 -25439056 + PB1D10 SINE Alu 1 70 -47 3 1662 309 299 118 53 chrX 141211427 141211940 -25438356 - L1M4 LINE L1 -4869 1673 1118 3 1662 1467 169 60 11 chrX 141211940 141212222 -25438074 - Lx LINE L1 -6 6648 6353 3 1662 309 299 118 53 chrX 141212222 141212427 -25437869 - L1M4 LINE L1 -5425 1117 908 3 1662 378 320 19 72 chrX 141213116 141213325 -25436971 - L1M4 LINE L1 -5648 894 697 3 1662 1321 254 45 33 chrX 141213423 141213782 -25436514 - Lx6 LINE L1 -6 7454 7092 3 1662 246 322 38 18 chrX 141213782 141213958 -25436338 + MLT1A1 LTR MaLR 45 226 -182 3 1662 610 286 132 0 chrX 141214306 141214488 -25435808 + ID_B1 SINE B4 11 216 -8 3 1662 5199 44 2 0 chrX 141214546 141215177 -25435119 + L1Md_T LINE L1 5948 6579 -3 3 1662 28 48 0 0 chrX 141215181 141215223 -25435073 + AT_rich Low_complexity Low_complexity 1 42 0 3 1662 22 35 0 0 chrX 141215263 141215292 -25435004 + AT_rich Low_complexity Low_complexity 1 29 0 3 1662 22 0 0 0 chrX 141215693 141215715 -25434581 + AT_rich Low_complexity Low_complexity 1 22 0 3 1662 23 0 0 0 chrX 141215738 141215761 -25434535 + AT_rich Low_complexity Low_complexity 1 23 0 3 1662 606 314 37 5 chrX 141216513 141216702 -25433594 - B3A SINE B2 -2 196 2 3 1662 254 219 57 66 chrX 141216971 141217093 -25433203 - Lx4B LINE L1 0 7058 6938 3 1662 3829 197 36 25 chrX 141217105 141217148 -25433148 - Lx5 LINE L1 -421 6629 6594 3 1662 423 0 0 0 chrX 141217148 141217195 -25433101 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 1662 279 0 0 0 chrX 141217195 141217225 -25433071 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1662 3829 200 35 24 chrX 141217225 141218007 -25432289 - Lx5 LINE L1 -457 6593 5794 3 1662 238 293 146 19 chrX 141217988 141218231 -25432065 + L1M5 LINE L1 5079 5352 -794 3 1662 345 329 32 70 chrX 141218521 141218678 -25431618 + LTR79 LTR ERVL 48 198 -329 3 1662 4710 68 0 25 chrX 141219301 141219950 -25430346 - L1Md_F2 LINE L1 -5 6577 5945 3 1662 3085 63 5 10 chrX 141219950 141220364 -25429932 + L1_Mm LINE L1 5264 5675 -208 3 1662 184 82 29 103 chrX 141221149 141221217 -25429079 + CT-rich Low_complexity Low_complexity 3 65 0 3 1662 610 276 18 19 chrX 141221226 141221386 -25428910 - ID_B1 SINE B4 -46 246 89 3 1662 8088 100 42 0 chrX 141221654 141222826 -25427470 - Lx3_Mus LINE L1 -6 7003 5783 3 1662 28949 101 6 5 chrX 141222826 141225181 -25425115 - L1_Mus2 LINE L1 0 6566 4209 3 1662 195 42 0 0 chrX 141225181 141225205 -25425091 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1662 28949 114 8 16 chrX 141225205 141228504 -25421792 - L1_Mus2 LINE L1 -1675 4208 952 3 1662 427 265 13 20 chrX 141228526 141228676 -25421620 - L1_Mus2 LINE L1 -5801 815 667 3 1662 6289 88 14 11 chrX 141228723 141229711 -25420585 - L1_Mur1 LINE L1 -1074 4812 3822 3 1662 371 298 10 0 chrX 141229792 141229896 -25420400 - PB1 SINE Alu -2 125 21 3 1662 8953 74 5 115 chrX 141230112 141231743 -25418553 - L1Md_F2 LINE L1 -7 6575 5303 3 1662 1667 43 5 0 chrX 141231743 141231953 -25418343 - L1Md_T LINE L1 0 6582 6372 3 1662 8953 70 0 196 chrX 141231953 141232899 -25417397 - L1Md_F2 LINE L1 -581 5302 4360 3 1662 7105 72 6 8 chrX 141232909 141234096 -25416200 - L1Md_F2 LINE L1 -14 6568 5389 3 1662 5955 85 111 0 chrX 141234077 141235034 -25415262 - L1Md_F2 LINE L1 -1309 4574 3512 3 1662 1303 126 27 9 chrX 141235032 141235257 -25415039 - L1VL1 LINE L1 -6193 229 1 3 1662 225 222 11 22 chrX 141235301 141235393 -25414903 - RMER17C LTR ERVK -142 268 178 3 1662 241 422 10 10 chrX 141236861 141237062 -25413234 + MIRc SINE MIR 40 240 -28 3 1662 585 52 0 0 chrX 141237156 141237233 -25413063 + (TG)n Simple_repeat Simple_repeat 2 78 0 3 1662 474 0 0 0 chrX 141237307 141237368 -25412928 - L1Md_T LINE L1 0 6582 6522 3 1662 192 231 182 15 chrX 141237373 141237439 -25412857 + MIR SINE MIR 106 182 -80 3 1662 264 371 27 34 chrX 141237696 141237844 -25412452 - MIRb SINE MIR -120 148 2 3 1662 266 242 16 0 chrX 141240200 141240262 -25410034 + CT-rich Low_complexity Low_complexity 2 64 0 3 1662 265 256 52 39 chrX 141240362 141240485 -25409811 + MIR SINE MIR 120 245 -23 3 1662 2683 148 103 21 chrX 141241205 141241730 -25408566 - Lx2B LINE L1 -10 6990 6423 3 1662 242 179 47 12 chrX 141242084 141242169 -25408127 + (TTATA)n Simple_repeat Simple_repeat 2 89 0 3 1662 506 322 123 16 chrX 141242204 141242570 -25407726 - Lx8 LINE L1 -9 7464 7060 3 1662 2717 279 54 13 chrX 141242586 141242791 -25407505 - Lx8 LINE L1 -470 7003 6784 3 1662 1929 173 25 6 chrX 141242791 141243151 -25407145 - ORR1B2 LTR MaLR 0 367 1 3 1662 2717 279 54 13 chrX 141243151 141243719 -25406577 - Lx8 LINE L1 -690 6783 6198 3 1662 230 314 46 76 chrX 141243719 141243850 -25406446 - RMER12 LTR ERVK -474 848 722 3 1662 758 238 43 65 chrX 141243854 141244248 -25406048 - L1_Rod LINE L1 -803 5340 4969 3 1662 1050 284 16 66 chrX 141244753 141245058 -25405238 + MTEa LTR MaLR 3 292 -87 3 1662 516 282 30 22 chrX 141245076 141245210 -25405086 - ID_B1 SINE B4 -9 215 81 3 1662 279 235 58 12 chrX 141245216 141245302 -25404994 + MTEa LTR MaLR 288 377 -2 3 1662 389 276 57 9 chrX 141246004 141246110 -25404186 + MIRb SINE MIR 56 166 -102 3 1662 6882 120 60 57 chrX 141246650 141248282 -25402014 - L1_Mus3 LINE L1 -7 6631 4897 3 1662 229 262 169 62 chrX 141248282 141248412 -25401884 + RMER20A LTR ERVK 105 248 -268 3 1662 6882 120 60 57 chrX 141248412 141248979 -25401317 - L1_Mus3 LINE L1 -7 4896 4293 3 1662 9356 107 5 10 chrX 141248977 141249385 -25400911 - L1VL4 LINE L1 -1184 2431 2032 4 1662 3164 44 5 0 chrX 141249385 141249771 -25400525 - RLTR10 LTR ERVK -2 388 1 4 1662 9356 151 9 41 chrX 141249771 141251741 -25398555 - L1VL4 LINE L1 -1584 2031 141 4 1662 597 280 0 67 chrX 141252074 141252254 -25398042 - MER58A DNA MER1_type -19 205 38 4 1662 315 0 0 0 chrX 141252696 141252731 -25397565 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1662 490 315 42 8 chrX 141252824 141253061 -25397235 + L1MD3 LINE L1 7734 7978 -17 4 1662 618 319 53 35 chrX 141253094 141253377 -25396919 + B4A SINE B4 1 288 -4 4 1662 383 144 27 9 chrX 141253433 141253545 -25396751 + (CA)n Simple_repeat Simple_repeat 2 115 0 4 1662 3556 64 17 6 chrX 141254175 141254645 -25395651 + L1_Mus2 LINE L1 6092 6566 0 4 1662 814 318 4 39 chrX 141254730 141254985 -25395311 + 7SK RNA RNA 2 247 -84 4 1662 246 298 56 90 chrX 141255211 141255355 -25394941 - L2a LINE L2 -1 3425 3287 4 1662 36868 6 1 1 chrX 141255529 141261322 -25388974 + L1Md_A LINE L1 1 5586 -297 4 1662 9071 2 0 0 chrX 141261322 141262318 -25387978 + L1Md_A LINE L1 5587 6582 0 4 1662 189 0 0 0 chrX 141262340 141262361 -25387935 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1662 391 108 0 30 chrX 141262754 141262821 -25387475 + Lx7 LINE L1 7632 7696 0 4 1662 1070 16 0 8 chrX 141264053 141264182 -25386114 + (TTCC)n Simple_repeat Simple_repeat 4 131 0 4 1662 7382 74 3 1 chrX 141264314 141265479 -25384817 - L1_Mus1 LINE L1 -2 6565 5398 4 1662 200 59 0 29 chrX 141265615 141265650 -25384646 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1662 3285 131 19 15 chrX 141265913 141266210 -25384086 - Lx2 LINE L1 -15 6982 6690 4 1662 1864 124 39 60 chrX 141266210 141266544 -25383752 + ORR1A2 LTR MaLR 1 327 0 4 1662 3285 131 19 15 chrX 141266544 141266787 -25383509 - Lx2 LINE L1 -308 6689 6440 4 1662 520 132 24 88 chrX 141266787 141266912 -25383384 - Lx2 LINE L1 -268 6386 6270 4 1662 1467 174 0 0 chrX 141266901 141267183 -25383113 - L1_Mur2 LINE L1 -489 5388 5107 4 1662 332 310 0 0 chrX 141267448 141267535 -25382761 + MIR SINE MIR 75 161 -101 4 1662 743 360 130 27 chrX 141267543 141268097 -25382199 - MLT2F LTR ERVL -4 659 49 4 1662 2547 185 70 24 chrX 141268243 141268785 -25381511 - Lx5 LINE L1 -607 6443 5877 4 1662 237 150 0 0 chrX 141268910 141268950 -25381346 + MTEa LTR MaLR 2 41 -338 4 1662 237 236 18 0 chrX 141268950 141268965 -25381331 + MLT2B5 LTR ERVL 2 57 -660 4 1662 909 171 0 0 chrX 141268969 141269144 -25381152 + Lx2 LINE L1 6788 6962 -35 4 1662 384 307 18 12 chrX 141270025 141270190 -25380106 + L1M2 LINE L1 5603 5768 -529 4 1662 210 229 33 0 chrX 141270201 141270262 -25380034 + (TA)n Simple_repeat Simple_repeat 2 64 0 4 1662 226 167 0 23 chrX 141271552 141271595 -25378701 + A-rich Low_complexity Low_complexity 2 43 0 4 1662 180 0 0 0 chrX 141271894 141271914 -25378382 + (TTA)n Simple_repeat Simple_repeat 1 20 0 4 1662 5835 228 54 63 chrX 141271927 141273716 -25376580 + Lx7 LINE L1 5825 7598 -98 4 1662 820 180 57 90 chrX 141273793 141274092 -25376204 - Lx7 LINE L1 0 7696 7408 4 1662 1586 318 34 53 chrX 141274117 141275009 -25375287 - L1_Mur3 LINE L1 -559 5321 4452 4 1662 3344 50 0 5 chrX 141275009 141275428 -25374868 - L1Md_F2 LINE L1 -1 6581 6165 4 1662 1586 318 34 53 chrX 141275428 141275934 -25374362 - L1_Mur3 LINE L1 -1429 4451 3950 4 1662 351 325 115 5 chrX 141276089 141276281 -25374015 - L1MD LINE L1 -1259 4887 4675 4 1662 1690 235 46 14 chrX 141276288 141276723 -25373573 + Lx9 LINE L1 6961 7409 -235 4 1662 559 121 20 0 chrX 141276736 141276835 -25373461 + (TC)n Simple_repeat Simple_repeat 2 102 0 4 1662 342 264 43 0 chrX 141276838 141276978 -25373318 + Lx9 LINE L1 7498 7643 -1 4 1662 21 36 0 0 chrX 141277053 141277081 -25373215 + AT_rich Low_complexity Low_complexity 1 28 0 4 1662 918 43 0 0 chrX 141277168 141277283 -25373013 + (TTTCC)n Simple_repeat Simple_repeat 1 115 0 4 1662 3444 201 52 45 chrX 141277681 141278301 -25371995 - L1MA4 LINE L1 -4233 1647 1064 4 1662 1464 191 98 60 chrX 141278301 141278480 -25371816 - ORR1C2 LTR MaLR -2 382 176 4 1662 603 0 0 0 chrX 141278480 141278547 -25371749 + (GA)n Simple_repeat Simple_repeat 2 68 0 4 1662 1464 191 98 60 chrX 141278547 141278735 -25371561 - ORR1C2 LTR MaLR -209 175 1 4 1662 3444 226 56 80 chrX 141278735 141279549 -25370747 - L1MA4 LINE L1 -6665 1063 281 4 1662 344 324 143 34 chrX 141279553 141279818 -25370478 - L1MDa LINE L1 -2291 4246 3953 4 1662 479 279 64 6 chrX 141279865 141280038 -25370258 - L1MA5 LINE L1 -24 6276 6094 4 1662 863 297 66 24 chrX 141280029 141280484 -25369812 + L1M2 LINE L1 5323 5796 -495 4 1662 285 323 24 8 chrX 141280944 141281069 -25369227 - L1MDa LINE L1 -6486 147 21 4 1662 510 287 0 14 chrX 141281385 141281523 -25368773 + L2a LINE L2 3280 3415 -11 4 1662 290 313 12 12 chrX 141283554 141283638 -25366658 + PB1D10 SINE Alu 1 84 -33 4 1662 236 276 26 13 chrX 141283650 141283727 -25366569 + GA-rich Low_complexity Low_complexity 2 79 0 4 1662 490 333 6 45 chrX 141283734 141283891 -25366405 + RSINE1 SINE B4 5 155 -10 4 1662 1334 319 63 26 chrX 141283964 141284705 -25365591 - L1MD2 LINE L1 -112 6247 5479 4 1662 606 333 51 25 chrX 141284861 141285058 -25365238 - B4A SINE B4 -75 217 16 4 1662 238 360 78 81 chrX 141285835 141286192 -25364104 + L2 LINE L2 2387 2742 -677 4 1662 771 11 0 0 chrX 141286238 141286326 -25363970 + (TTCC)n Simple_repeat Simple_repeat 1 88 0 4 1662 222 246 27 68 chrX 141286431 141286505 -25363791 + RSINE1 SINE B4 8 78 -87 4 1662 210 232 53 18 chrX 141287782 141287839 -25362457 + ID SINE ID 3 61 -163 4 1662 1357 274 50 6 chrX 141289131 141289450 -25360846 + ORR1D2 LTR MaLR 38 370 0 4 1662 511 335 33 9 chrX 141289472 141289683 -25360613 + MIR SINE MIR 32 247 -15 4 1662 24 0 0 0 chrX 141289684 141289708 -25360588 + AT_rich Low_complexity Low_complexity 1 24 0 4 1662 399 125 0 0 chrX 141289711 141289783 -25360513 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 1662 450 0 0 0 chrX 141289783 141289832 -25360464 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 1662 21 36 0 0 chrX 141290794 141290822 -25359474 + AT_rich Low_complexity Low_complexity 1 28 0 4 1662 835 177 20 0 chrX 141290825 141290972 -25359324 - B1_Mur4 SINE Alu 0 150 1 4 1662 324 0 0 0 chrX 141291189 141291225 -25359071 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1662 3783 111 14 4 chrX 141291324 141291821 -25358475 + L1_Mm LINE L1 5285 5782 -101 4 1662 4829 28 2 0 chrX 141291821 141292389 -25357907 + L1Md_F3 LINE L1 6014 6582 -2 4 1662 3783 111 14 4 chrX 141292389 141292442 -25357854 + L1_Mm LINE L1 5783 5840 -43 4 1662 343 176 68 0 chrX 141292409 141292483 -25357813 - L1Md_F3 LINE L1 -465 6119 6041 4 1662 4190 32 2 0 chrX 141292483 141292978 -25357318 + L1Md_T LINE L1 6085 6580 -2 4 1662 28 0 0 0 chrX 141292978 141293006 -25357290 + AT_rich Low_complexity Low_complexity 1 28 0 4 1662 5144 115 21 4 chrX 141293011 141293806 -25356490 + L1_Mus4 LINE L1 5827 6635 -1 4 1662 767 161 280 0 chrX 141293833 141294001 -25356295 + B3 SINE B2 1 215 -1 4 1662 1301 128 41 0 chrX 141294612 141294831 -25355465 - Lx2 LINE L1 0 6997 6770 4 207 6437 142 15 7 chrX 141294826 141296534 -25353762 - Lx2 LINE L1 -352 6645 4924 4 1663 261 377 9 0 chrX 141296890 141297004 -25353292 + MIR SINE MIR 129 243 -19 4 1663 1785 275 36 98 chrX 141297171 141297917 -25352379 - Lx8 LINE L1 0 7473 6774 4 1663 322 332 65 28 chrX 141297977 141298191 -25352105 - L1MB3 LINE L1 -1 6182 5961 4 1663 1085 301 80 40 chrX 141298216 141298888 -25351408 - L1MA10 LINE L1 -33 6301 5603 4 1663 265 287 0 0 chrX 141298896 141298997 -25351299 + T-rich Low_complexity Low_complexity 1 101 0 4 1663 3556 218 23 10 chrX 141299058 141299844 -25350452 - Lx5 LINE L1 0 7050 6201 4 1663 429 20 0 0 chrX 141299995 141300045 -25350251 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1663 315 0 0 0 chrX 141300045 141300079 -25350217 + (GA)n Simple_repeat Simple_repeat 1 35 0 4 1663 561 333 13 0 chrX 141300089 141300245 -25350051 - B3 SINE B2 -32 184 27 4 1663 435 384 20 0 chrX 141300323 141300469 -25349827 - B1F SINE Alu 0 149 1 4 1663 722 278 131 3 chrX 141300638 141300952 -25349344 - L1MB3 LINE L1 -240 5943 5590 4 1663 2058 317 88 62 chrX 141300953 141301069 -25349227 - Lx9 LINE L1 0 7473 7356 4 1663 477 50 0 0 chrX 141301069 141301129 -25349167 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 1663 2421 317 88 62 chrX 141301129 141302641 -25347655 - Lx9 LINE L1 -170 7474 5803 4 1663 308 225 217 0 chrX 141302633 141302792 -25347504 + L1_Mur2 LINE L1 4170 4361 -1486 4 1663 280 286 0 25 chrX 141302844 141302923 -25347373 - L1MB3 LINE L1 -597 5586 5510 4 1663 201 368 0 13 chrX 141303041 141303118 -25347178 + L3 LINE CR1 4213 4288 -201 4 1663 5939 34 19 9 chrX 141304186 141304920 -25345376 + L1Md_F3 LINE L1 5830 6570 -14 4 1663 294 300 54 54 chrX 141305117 141305265 -25345031 + MIRm SINE MIR 27 174 -102 4 1663 22366 85 1 4 chrX 141306378 141307571 -25342725 - L1_Mus1 LINE L1 0 6567 5377 4 1663 2293 60 7 0 chrX 141307571 141307872 -25342424 + L1Md_F2 LINE L1 6279 6581 -1 4 1663 22366 132 4 30 chrX 141307872 141311924 -25338372 - L1_Mus1 LINE L1 -507 5376 1592 4 1663 4959 64 0 16 chrX 141311924 141312571 -25337725 - L1Md_F2 LINE L1 -14 6568 5932 4 1663 21919 154 3 69 chrX 141312571 141313084 -25337212 - L1_Mus1 LINE L1 -4286 1591 1138 4 1663 293 0 27 0 chrX 141313084 141313121 -25337175 + (TTTTG)n Simple_repeat Simple_repeat 5 42 0 4 1663 5831 118 0 66 chrX 141313121 141313896 -25336400 - L1_Mus1 LINE L1 -5501 1137 416 4 1663 320 303 143 71 chrX 141313969 141314221 -25336075 + Lx8 LINE L1 7197 7466 -7 4 1663 936 306 76 36 chrX 141314543 141314735 -25335561 - ORR1D2 LTR MaLR 0 370 165 4 1663 333 0 0 0 chrX 141314735 141314772 -25335524 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 1663 936 306 76 36 chrX 141314772 141314935 -25335361 - ORR1D2 LTR MaLR -206 164 1 4 1663 419 340 30 73 chrX 141315028 141315358 -25334938 + Charlie7 DNA MER1_type 361 676 -1936 4 1663 216 0 0 0 chrX 141315400 141315424 -25334872 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 1663 195 184 0 0 chrX 141316093 141316131 -25334165 + (TAG)n Simple_repeat Simple_repeat 1 38 0 4 1663 3085 63 10 2 chrX 141316217 141316614 -25333682 + L1_Mus1 LINE L1 6167 6566 -1 4 1663 4645 63 16 11 chrX 141316924 141317547 -25332749 + L1_Mus3 LINE L1 6011 6636 -2 4 1663 430 289 10 0 chrX 141319187 141319291 -25331005 - PB1D10 SINE Alu -1 116 12 4 1663 429 287 0 0 chrX 141319651 141319780 -25330516 + Lx9 LINE L1 7345 7473 -171 4 1663 31 44 0 0 chrX 141319907 141319952 -25330344 + AT_rich Low_complexity Low_complexity 1 45 0 5 1663 649 335 17 13 chrX 141320375 141320608 -25329688 - MIR SINE MIR -21 241 8 5 1663 357 285 61 17 chrX 141321082 141321248 -25329048 - MER63A DNA AcHobo -59 151 10 5 1663 750 199 8 0 chrX 141321805 141321936 -25328360 + B1_Mus1 SINE Alu 10 141 -7 5 1663 324 0 0 0 chrX 141321937 141321973 -25328323 + (CCA)n Simple_repeat Simple_repeat 1 36 0 5 1663 180 0 0 0 chrX 141321973 141321993 -25328303 + (CAA)n Simple_repeat Simple_repeat 3 22 0 5 1663 770 259 46 0 chrX 141321999 141322196 -25328100 - ID_B1 SINE B4 -17 207 2 5 1663 559 283 43 21 chrX 141322711 141322852 -25327444 - B1_Mur1 SINE Alu 0 149 6 5 1663 814 263 29 64 chrX 141323679 141324098 -25326198 - L1MA9 LINE L1 -35 6277 5874 5 1663 285 240 0 0 chrX 141324440 141324490 -25325806 - L2b LINE L2 -5 3370 3321 5 1663 302 282 243 22 chrX 141324524 141324709 -25325587 - MIRb SINE MIR -8 260 35 5 1663 21 36 0 0 chrX 141325765 141325793 -25324503 + AT_rich Low_complexity Low_complexity 1 28 0 5 1663 675 181 239 11 chrX 141326235 141326419 -25323877 - URR1A DNA MER1_type 0 226 1 5 1663 180 346 0 0 chrX 141326556 141326608 -25323688 + MIRc SINE MIR 77 128 -140 5 1663 660 26 0 0 chrX 141326675 141326753 -25323543 + (TC)n Simple_repeat Simple_repeat 1 78 0 5 1663 485 120 11 0 chrX 141328195 141328287 -25322009 + (TC)n Simple_repeat Simple_repeat 2 94 0 5 1663 1809 86 7 18 chrX 141328679 141328953 -25321343 + L1_Mus2 LINE L1 6296 6566 0 5 1663 221 171 0 0 chrX 141329012 141329053 -25321243 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 5 1663 9288 101 13 9 chrX 141329053 141330586 -25319710 - Lx3A LINE L1 0 6981 5445 5 1663 21 89 0 0 chrX 141331206 141331262 -25319034 + AT_rich Low_complexity Low_complexity 1 56 0 5 1663 275 278 0 27 chrX 141331433 141331507 -25318789 + MIRb SINE MIR 124 195 -73 5 1663 357 24 0 0 chrX 141331520 141331562 -25318734 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1663 1458 219 21 59 chrX 141331703 141332092 -25318204 + ORR1D1 LTR MaLR 1 374 0 5 1663 622 329 71 4 chrX 141332099 141332325 -25317971 + MLT1D LTR MaLR 3 243 -262 5 1663 2628 211 35 39 chrX 141332462 141333030 -25317266 + Lx5 LINE L1 6483 7048 -2 5 1663 331 283 65 11 chrX 141333285 141333378 -25316918 - RSINE1 SINE B4 -14 151 54 5 1663 258 219 0 0 chrX 141333447 141333488 -25316808 + 5S rRNA rRNA 1 41 -80 5 1663 291 320 58 45 chrX 141334415 141334569 -25315727 + B4A SINE B4 125 280 -12 5 1663 675 37 0 0 chrX 141334594 141334676 -25315620 + (CA)n Simple_repeat Simple_repeat 2 83 0 5 1663 249 108 0 0 chrX 141334988 141335025 -25315271 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 5 1663 309 400 75 23 chrX 141335257 141335431 -25314865 + B3A SINE B2 1 183 -15 5 1663 510 285 7 37 chrX 141335908 141336043 -25314253 + URR1B DNA MER1_type 1 131 -94 5 1663 347 263 0 0 chrX 141336149 141336263 -25314033 + L1MDb LINE L1 1105 1218 -5322 5 1663 242 231 73 57 chrX 141336470 141336594 -25313702 + L1MDb LINE L1 1447 1581 -5052 5 1663 5080 131 23 18 chrX 141336751 141337576 -25312720 + ORR1A2-int LTR MaLR 1135 1963 0 5 1663 1537 143 37 8 chrX 141337576 141337844 -25312452 + ORR1A2 LTR MaLR 1 276 -51 5 1663 267 157 0 0 chrX 141337853 141337923 -25312373 + (TA)n Simple_repeat Simple_repeat 1 70 0 5 1663 525 165 23 6 chrX 141337949 141338126 -25312170 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 5 1663 207 327 0 0 chrX 141338127 141338182 -25312114 + A-rich Low_complexity Low_complexity 4 58 0 5 1663 3735 98 15 6 chrX 141338183 141338727 -25311569 + Lx LINE L1 6103 6651 -3 5 1663 700 231 46 0 chrX 141338980 141339110 -25311186 + B1_Mus1 SINE Alu 5 140 -8 5 1663 585 283 24 18 chrX 141339658 141339827 -25310469 - MT2A LTR ERVL -119 414 245 5 1663 1279 266 41 38 chrX 141339885 141340145 -25310151 - ORR1D2 LTR MaLR 0 370 108 5 1663 2845 52 0 3 chrX 141340145 141340492 -25309804 + ORR1A1 LTR MaLR 1 346 0 5 1663 1279 266 41 38 chrX 141340492 141340598 -25309698 - ORR1D2 LTR MaLR -263 107 3 5 1663 2559 235 119 40 chrX 141340600 141340957 -25309339 - ORR1D2-int LTR MaLR 0 1370 975 5 1663 987 117 0 0 chrX 141340957 141341137 -25309159 + (TC)n Simple_repeat Simple_repeat 1 180 0 5 1663 2559 235 119 40 chrX 141341137 141341507 -25308789 - ORR1D2-int LTR MaLR -396 974 585 5 1663 30564 75 2 21 chrX 141341517 141346942 -25303354 + L1Md_F2 LINE L1 266 5586 -297 5 1663 8283 38 0 2 chrX 141346942 141347928 -25302368 + L1Md_F2 LINE L1 5587 6570 -12 5 1663 640 230 112 28 chrX 141347930 141348145 -25302151 - ORR1D2-int LTR MaLR -773 597 365 5 1663 460 190 29 48 chrX 141348451 141348556 -25301740 - ORR1D2-int LTR MaLR -1118 391 289 5 1663 689 171 141 20 chrX 141348563 141348754 -25301542 + RMER6A LTR ERVK 1 276 -444 5 1663 1249 154 64 53 chrX 141348790 141349090 -25301206 + RMER6A LTR ERVK 349 690 0 5 1663 1369 205 35 14 chrX 141349091 141349373 -25300923 - ORR1D2-int LTR MaLR -1081 289 2 5 1663 762 226 98 16 chrX 141349373 141349566 -25300730 - ORR1D2 LTR MaLR 0 374 166 5 1663 399 41 0 0 chrX 141349569 141349618 -25300678 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1663 359 89 18 0 chrX 141349610 141349666 -25300630 + (GGA)n Simple_repeat Simple_repeat 2 58 0 5 1663 370 317 50 15 chrX 141349758 141349960 -25300336 - L1MB8 LINE L1 -125 6053 5845 5 1663 557 287 53 0 chrX 141350073 141350223 -25300073 - MIRb SINE MIR -91 177 20 5 1663 724 279 114 70 chrX 141351591 141351949 -25298347 + MLT2B4 LTR ERVL 6 379 -177 5 1663 3860 180 60 88 chrX 141352553 141353269 -25297027 - RMER19B LTR ERVK 0 902 164 5 1663 2839 61 3 0 chrX 141353269 141353630 -25296666 - L1_Mus2 LINE L1 0 6566 6205 5 1663 3860 210 60 88 chrX 141353630 141353818 -25296478 - RMER19B LTR ERVK -391 220 28 5 1663 2250 250 55 102 chrX 141353837 141354723 -25295573 + RMER1A Other Other 180 1024 -6 5 1663 562 305 9 79 chrX 141355033 141355261 -25295035 + Lx6 LINE L1 7204 7415 -45 5 1663 198 0 0 0 chrX 141355974 141355996 -25294300 + (TTTTC)n Simple_repeat Simple_repeat 2 23 0 5 1663 6872 61 2 2 chrX 141356018 141356932 -25293364 - L1Md_F2 LINE L1 0 6582 5669 5 1663 1396 147 0 0 chrX 141357056 141357280 -25293016 - Lx2 LINE L1 0 6997 6774 5 1663 807 146 4 0 chrX 141357280 141357428 -25292868 - Lx2 LINE L1 -355 6642 6517 5 1663 914 304 97 33 chrX 141357429 141357789 -25292507 + MER31B LTR ERV1 1 383 -83 5 1663 271 340 45 36 chrX 141357809 141357919 -25292377 - PB1D9 SINE Alu -7 113 3 5 1663 514 344 0 0 chrX 141357919 141358001 -25292295 - ID SINE ID -141 83 2 5 1663 241 341 30 23 chrX 141358043 141358175 -25292121 - LTR37A LTR ERV1 -290 136 4 5 1663 222 256 0 0 chrX 141358517 141358560 -25291736 + polypurine Low_complexity Low_complexity 4 46 0 5 1663 204 158 0 0 chrX 141358562 141358600 -25291696 + GA-rich Low_complexity Low_complexity 2 39 0 5 1663 974 137 12 0 chrX 141358934 141359102 -25291194 + (GGAA)n Simple_repeat Simple_repeat 2 171 0 5 1663 221 283 0 21 chrX 141359111 141359158 -25291138 + B1F1 SINE Alu 16 61 -88 5 1663 297 250 14 27 chrX 141359116 141359190 -25291106 + ID_B1 SINE B4 102 174 -50 5 1663 456 391 49 13 chrX 141359378 141359684 -25290612 - L3 LINE CR1 -492 3997 3681 5 1663 1369 104 40 18 chrX 141359917 141360143 -25290153 - Lx3_Mus LINE L1 -4 7005 6775 5 1663 1043 232 124 0 chrX 141360171 141360533 -25289763 - Lx9 LINE L1 -7 7637 7231 5 1663 328 237 25 50 chrX 141360938 141361018 -25289278 - ID4 SINE ID -2 81 4 5 1663 543 53 0 0 chrX 141361151 141361226 -25289070 + (TCTCTG)n Simple_repeat Simple_repeat 4 78 0 5 1663 240 35 0 0 chrX 141361226 141361254 -25289042 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 1663 320 304 65 0 chrX 141361304 141361396 -25288900 + PB1 SINE Alu 20 117 -10 5 1663 207 351 52 17 chrX 141361420 141361536 -25288760 + MIR SINE MIR 124 243 -19 5 1663 8588 9 0 0 chrX 141361972 141363345 -25286951 - L1Md_T LINE L1 0 6582 5210 5 1663 1306 95 26 5 chrX 141363699 141363889 -25286407 + B2_Mm2 SINE B2 1 194 -1 5 1663 1970 131 5 20 chrX 141364004 141364394 -25285902 + L1_Mur3 LINE L1 3073 3456 -2424 5 1663 4573 222 50 33 chrX 141364374 141365544 -25284752 + Lx7 LINE L1 6149 7337 -359 5 1663 1282 154 60 11 chrX 141366095 141366377 -25283919 + Lx7 LINE L1 7358 7653 -43 5 1663 221 193 34 57 chrX 141366568 141366656 -25283640 + T-rich Low_complexity Low_complexity 3 88 0 5 1663 1034 206 119 31 chrX 141366664 141366925 -25283371 - RMER5 LTR ERV1 -250 284 1 5 1663 541 196 43 7 chrX 141367419 141367558 -25282738 - Lx5 LINE L1 0 7050 6907 5 1663 1028 142 17 23 chrX 141367558 141367731 -25282565 - Lx5 LINE L1 -265 6785 6614 5 1663 225 300 0 0 chrX 141368532 141368582 -25281714 + ID4_ SINE ID 4 53 -30 5 1663 576 0 0 0 chrX 141368607 141368671 -25281625 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 1663 207 69 0 0 chrX 141368793 141368822 -25281474 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 1663 222 246 33 50 chrX 141368871 141368931 -25281365 + L2a LINE L2 3332 3390 -36 5 1663 264 305 31 31 chrX 141369157 141369255 -25281041 + MIR3 SINE MIR 102 199 -9 5 1663 2248 67 51 93 chrX 141371103 141371512 -25278784 - L1_Mus1 LINE L1 -299 6268 5877 5 1663 341 75 1 0 chrX 141371510 141371560 -25278736 + L1Md_F3 LINE L1 6219 6270 -314 5 1663 379 147 0 0 chrX 141371560 141371635 -25278661 + L1_Mus1 LINE L1 6493 6567 0 5 1663 306 73 0 0 chrX 141371657 141371698 -25278598 + (GA)n Simple_repeat Simple_repeat 2 42 0 5 1663 186 302 38 0 chrX 141371826 141371879 -25278417 - L2c LINE L2 -3 3384 3330 5 1663 690 258 86 11 chrX 141371979 141372257 -25278039 - L1MA9 LINE L1 -10 6302 6004 5 1663 192 179 0 0 chrX 141372323 141372362 -25277934 + CT-rich Low_complexity Low_complexity 2 40 0 5 1663 311 369 0 37 chrX 141372380 141372487 -25277809 - PB1D10 SINE Alu -8 109 7 5 1663 24 53 0 0 chrX 141372511 141372549 -25277747 + AT_rich Low_complexity Low_complexity 1 38 0 5 1663 1866 179 119 0 chrX 141372656 141373025 -25277271 + MTC LTR MaLR 1 413 -8 5 1663 275 316 71 28 chrX 141373372 141373554 -25276742 + MIR SINE MIR 51 240 -22 5 1663 311 367 34 11 chrX 141373655 141373834 -25276462 + MIR SINE MIR 80 262 0 5 1663 638 280 66 75 chrX 141373830 141374058 -25276238 - MIRb SINE MIR -29 239 14 5 1663 303 306 61 0 chrX 141374791 141374889 -25275407 - MIRm SINE MIR -115 161 58 5 1663 296 361 82 18 chrX 141375095 141375315 -25274981 + MIR SINE MIR 10 243 -19 6 1663 522 199 20 33 chrX 141375648 141375799 -25274497 - Lx9 LINE L1 -10 7634 7486 6 1663 340 0 0 0 chrX 141375799 141375837 -25274459 - HAL1-3A_ME LINE L1 -846 2012 1975 6 1663 1136 219 40 3 chrX 141375845 141376147 -25274149 - Lx9 LINE L1 -127 7517 7205 6 1663 13766 123 26 7 chrX 141376433 141377693 -25272603 - Lx LINE L1 -5 6649 5368 6 1663 5947 69 13 1 chrX 141377693 141378465 -25271831 + L1Md_F2 LINE L1 5802 6582 0 6 1663 13766 166 30 21 chrX 141378465 141378569 -25271727 - Lx LINE L1 -516 5367 5283 6 1663 3562 15 0 0 chrX 141378569 141378965 -25271331 - MTA_Mm LTR MaLR 0 396 1 6 1663 13766 167 30 28 chrX 141378965 141381561 -25268735 - Lx LINE L1 -601 5282 2810 6 1663 1059 105 134 0 chrX 141383256 141383427 -25266869 - Lx LINE L1 -307 5576 5383 6 1663 7023 95 19 8 chrX 141383427 141384482 -25265814 + Lx LINE L1 5588 6653 -1 6 1663 2812 104 17 0 chrX 141384748 141385162 -25265134 - BGLII LTR ERVK 0 421 1 6 1663 251 253 25 12 chrX 141385445 141385525 -25264771 - Lx7 LINE L1 -426 7270 7190 6 1663 225 0 0 0 chrX 141385564 141385589 -25264707 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 6 1663 2388 162 8 5 chrX 141385650 141386034 -25264262 - ORR1B1 LTR MaLR -8 386 2 6 1663 6061 182 72 40 chrX 141386035 141386136 -25264160 - ORR1B1-int LTR MaLR 0 1509 1445 6 1663 1073 102 0 13 chrX 141386136 141386285 -25264011 - B1_Mus1 SINE Alu -1 147 1 6 1663 6061 182 72 40 chrX 141386285 141387645 -25262651 - ORR1B1-int LTR MaLR -65 1444 1 6 1663 236 287 28 73 chrX 141388060 141388169 -25262127 + L2c LINE L2 3280 3383 -4 6 1663 481 223 0 0 chrX 141388305 141388426 -25261870 - Lx6 LINE L1 -9 7451 7331 6 1663 620 237 81 0 chrX 141388426 141388599 -25261697 - Lx6 LINE L1 -650 6810 6624 6 1663 499 196 9 56 chrX 141388599 141388707 -25261589 + RMER19B LTR ERVK 170 272 -630 6 1663 7034 28 1 0 chrX 141388712 141389538 -25260758 - L1Md_A LINE L1 -1 6581 5755 6 1663 16732 20 2 0 chrX 141389538 141391480 -25258816 + L1Md_A LINE L1 3795 5740 -143 6 1663 1919 125 114 68 chrX 141391486 141391940 -25258356 - IAPLTR2_Mm LTR ERVK 0 475 1 6 1663 2933 167 105 12 chrX 141391941 141392522 -25257774 + RMER19B LTR ERVK 268 902 0 6 1663 2469 175 49 22 chrX 141392522 141393071 -25257225 - L1_Mur3 LINE L1 -3406 2474 1911 6 1663 256 295 73 45 chrX 141393367 141393477 -25256819 - B1F SINE Alu 0 149 37 6 1663 396 40 0 0 chrX 141393635 141393685 -25256611 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 1663 2959 161 27 14 chrX 141394090 141395161 -25255135 + L1Md_F LINE L1 367 1518 -4365 6 1663 23 0 0 0 chrX 141395170 141395193 -25255103 + AT_rich Low_complexity Low_complexity 1 23 0 6 1663 7334 87 1 2 chrX 141395193 141396171 -25254125 - L1_Mus2 LINE L1 -2 6564 5588 6 1663 4693 119 13 3 chrX 141396178 141396943 -25253353 + L1Md_F LINE L1 1504 2276 -3607 6 1663 565 294 51 68 chrX 141396943 141397177 -25253119 - ORR1B1 LTR MaLR -148 230 1 6 1663 1663 228 53 14 chrX 141397177 141397613 -25252683 - Lx9 LINE L1 -160 7484 7032 6 1663 26 30 0 0 chrX 141400467 141400500 -25249796 + AT_rich Low_complexity Low_complexity 1 33 0 6 1663 263 254 0 16 chrX 141400556 141400620 -25249676 - Charlie4z DNA MER1_type -29 138 76 6 1663 255 239 0 0 chrX 141400620 141400687 -25249609 + (CATA)n Simple_repeat Simple_repeat 1 67 0 6 1663 1685 191 117 19 chrX 141400966 141401393 -25248903 - Lx9 LINE L1 -8 7636 7168 6 1663 7036 45 1 0 chrX 141401367 141402549 -25247747 - L1Md_F3 LINE L1 -391 6193 5011 6 1663 2939 33 8 8 chrX 141402549 141402918 -25247378 + L1Md_F3 LINE L1 6199 6567 -17 6 1663 2355 216 18 18 chrX 141402923 141403423 -25246873 - Lx9 LINE L1 -445 7199 6700 6 1663 1221 245 45 56 chrX 141403467 141403822 -25246474 + Lx9 LINE L1 6349 6699 -945 6 1663 2982 219 98 48 chrX 141403811 141405405 -25244891 - L1_Rod LINE L1 -3663 2184 521 6 1663 460 383 43 30 chrX 141405567 141405801 -25244495 - ORR1E LTR MaLR -122 237 1 6 1663 1204 6 0 113 chrX 141405982 141406185 -25244111 + (TTC)n Simple_repeat Simple_repeat 1 180 0 6 1663 1163 75 0 0 chrX 141406191 141406337 -25243959 - B1_Mus2 SINE Alu 0 147 2 6 1663 21 0 0 0 chrX 141407570 141407591 -25242705 + AT_rich Low_complexity Low_complexity 1 21 0 6 1663 749 136 90 0 chrX 141408777 141408932 -25241364 + Lx3_Mus LINE L1 6839 7007 -2 6 1663 235 174 158 32 chrX 141409279 141409374 -25240922 - Lx9 LINE L1 -2 7642 7536 6 1663 621 210 17 0 chrX 141409385 141409504 -25240792 + Lx9 LINE L1 7290 7410 -234 6 1663 485 362 56 5 chrX 141409987 141410184 -25240112 - Charlie17a DNA MER1_type -12 207 1 6 1663 2680 59 0 0 chrX 141410483 141410821 -25239475 - ORR1A0 LTR MaLR -8 338 1 6 1663 287 331 13 0 chrX 141411273 141411430 -25238866 - L1MC4a LINE L1 -2003 5879 5721 6 1663 408 104 0 0 chrX 141412128 141412195 -25238101 + (TATG)n Simple_repeat Simple_repeat 3 69 0 6 1663 6512 109 13 24 chrX 141412256 141413330 -25236966 + MusHAL1 LINE L1 1153 2214 -498 6 1663 8320 112 2 0 chrX 141413335 141415108 -25235188 + L1_Mus3 LINE L1 4610 6385 -253 6 1663 321 52 51 25 chrX 141415108 141415187 -25235109 + (CAAAAA)n Simple_repeat Simple_repeat 3 83 0 6 1663 1687 120 11 7 chrX 141415187 141415456 -25234840 + L1_Mus3 LINE L1 6369 6638 0 6 1663 289 356 59 60 chrX 141415601 141415804 -25234492 + MIR SINE MIR 31 236 -26 6 1663 22 0 0 0 chrX 141415852 141415874 -25234422 + AT_rich Low_complexity Low_complexity 1 22 0 6 1663 1303 176 13 42 chrX 141416403 141416815 -25233481 + RMER1B Other Other 640 1061 -5 6 1663 27 49 0 0 chrX 141416842 141416883 -25233413 + AT_rich Low_complexity Low_complexity 1 41 0 6 1663 542 168 0 9 chrX 141418222 141418336 -25231960 + (TA)n Simple_repeat Simple_repeat 2 114 0 6 1663 266 345 122 34 chrX 141418978 141419125 -25231171 + MIR3 SINE MIR 34 193 -15 6 1663 192 40 0 0 chrX 141419227 141419252 -25231044 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 6 1663 281 47 0 23 chrX 141419274 141419318 -25230978 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 1663 681 53 32 0 chrX 141419930 141420024 -25230272 - L1_Mus2 LINE L1 -225 6341 6245 6 1663 1092 106 0 0 chrX 141420014 141420175 -25230121 + L1_Mus2 LINE L1 6347 6507 -59 6 1663 303 71 0 0 chrX 141420183 141420225 -25230071 + (GAAAA)n Simple_repeat Simple_repeat 2 43 0 6 1663 186 71 0 0 chrX 141420377 141420405 -25229891 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1663 231 310 0 40 chrX 141420976 141421050 -25229246 - ID4_ SINE ID -11 72 2 6 1663 573 363 101 17 chrX 141421335 141421691 -25228605 + RMER15 LTR ERVL 190 575 0 6 1663 226 402 0 0 chrX 141421771 141421883 -25228413 - MIRc SINE MIR -71 197 86 6 1663 207 0 0 0 chrX 141421996 141422019 -25228277 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 6 1663 423 319 19 25 chrX 141422756 141422917 -25227379 - MLT1B LTR MaLR -15 375 216 6 1663 1837 150 0 0 chrX 141423088 141423395 -25226901 - L1_Mur3 LINE L1 -3008 2872 2566 6 1663 801 183 55 80 chrX 141423407 141423541 -25226755 - L1_Mur3 LINE L1 -3697 2183 2058 6 1663 381 58 0 0 chrX 141423541 141423593 -25226703 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1663 801 183 55 80 chrX 141423593 141423696 -25226600 - L1_Mur3 LINE L1 -3823 2057 1952 6 1663 336 256 188 62 chrX 141424118 141424214 -25226082 - RMER10A LTR ERVL -79 363 261 6 1663 1275 89 0 0 chrX 141424214 141424393 -25225903 + (GGAGA)n Simple_repeat Simple_repeat 1 179 0 6 1663 336 256 188 62 chrX 141424393 141424407 -25225889 - RMER10A LTR ERVL -182 260 244 6 1663 192 97 0 0 chrX 141424407 141424438 -25225858 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1663 711 35 0 0 chrX 141424438 141424523 -25225773 + (GA)n Simple_repeat Simple_repeat 2 87 0 6 1663 336 256 188 62 chrX 141424523 141424718 -25225578 - RMER10A LTR ERVL -199 243 18 6 1663 4288 156 51 29 chrX 141424753 141426279 -25224017 - L1_Mur3 LINE L1 -3938 1942 389 6 1663 1278 201 52 35 chrX 141426279 141426567 -25223729 - MTC LTR MaLR -128 293 1 6 207 416 298 154 6 chrX 141426598 141426760 -25223536 + MIRb SINE MIR 6 191 -77 6 1664 274 229 36 0 chrX 141427185 141427268 -25223028 + Lx9 LINE L1 7531 7616 -28 6 1664 2336 149 44 25 chrX 141427275 141427682 -25222614 - MTC LTR MaLR -6 415 1 6 1664 3451 120 16 18 chrX 141427854 141428406 -25221890 - L1_Mus3 LINE L1 -3 6635 6085 6 1664 6239 118 3 1 chrX 141428407 141429613 -25220683 + L1_Mus3 LINE L1 4908 6116 -522 6 1664 317 297 33 11 chrX 141429671 141429763 -25220533 + MER2B DNA MER2_type 243 336 0 6 1664 33418 89 5 8 chrX 141429781 141436068 -25214228 - L1Md_F2 LINE L1 -2 6580 309 6 1664 285 328 31 39 chrX 141436749 141436876 -25213420 - MIRb SINE MIR -63 205 80 6 1664 495 0 0 0 chrX 141436925 141436980 -25213316 + (TC)n Simple_repeat Simple_repeat 2 56 0 6 1664 429 20 0 0 chrX 141436980 141437029 -25213267 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1664 231 61 0 0 chrX 141437616 141437649 -25212647 + (T)n Simple_repeat Simple_repeat 1 33 0 6 1664 1104 82 7 0 chrX 141437652 141437798 -25212498 - B1_Mus2 SINE Alu 0 147 1 6 1664 225 0 0 0 chrX 141438139 141438164 -25212132 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 6 1664 343 394 56 28 chrX 141439307 141439628 -25210668 - L1M5 LINE L1 -382 5812 5483 6 1664 477 0 0 0 chrX 141439629 141439682 -25210614 + (TTTTA)n Simple_repeat Simple_repeat 2 54 0 6 1664 412 92 0 0 chrX 141439682 141439747 -25210549 - Lx3A LINE L1 -12 6969 6905 6 1664 461 194 21 11 chrX 141439751 141439845 -25210451 + MurSatRep1 Unknown Unknown 222 316 -1821 6 1664 361 231 26 0 chrX 141439877 141439955 -25210341 + ID4_ SINE ID 2 81 -2 6 1664 189 366 216 0 chrX 141441264 141441458 -25208838 - MIRb SINE MIR -7 261 26 6 1664 533 293 52 57 chrX 141442253 141442421 -25207875 + B3A SINE B2 2 172 -26 6 1664 297 0 0 0 chrX 141442421 141442454 -25207842 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1664 533 293 52 57 chrX 141442454 141442477 -25207819 + B3A SINE B2 173 192 -6 6 1664 1508 217 25 63 chrX 141442955 141443319 -25206977 + ORR1D1 LTR MaLR 5 354 -20 6 1664 261 0 0 0 chrX 141443482 141443511 -25206785 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1664 387 238 0 0 chrX 141443738 141443818 -25206478 - RMER1C Other Other -265 1077 998 6 1664 1215 152 75 17 chrX 141443825 141444066 -25206230 + RMER1C Other Other 1088 1342 0 6 1664 30 0 0 0 chrX 141444466 141444496 -25205800 + AT_rich Low_complexity Low_complexity 1 30 0 6 1664 320 327 128 57 chrX 141444726 141445093 -25205203 - L1ME3A LINE L1 -267 5906 5514 6 1664 556 277 87 45 chrX 141445382 141445552 -25204744 - L1MB8 LINE L1 -201 5977 5791 6 1664 3290 144 94 3 chrX 141445552 141446116 -25204180 - Lx3B LINE L1 -2 6971 6357 6 1664 556 277 87 45 chrX 141446116 141446346 -25203950 - L1MB8 LINE L1 -388 5790 5560 6 1664 477 228 66 16 chrX 141446560 141446743 -25203553 - Lx9 LINE L1 -1 7643 7452 6 1664 305 282 15 37 chrX 141446796 141446932 -25203364 - L1M3 LINE L1 -726 5445 5313 6 1664 830 259 105 16 chrX 141447105 141447485 -25202811 + L1MA4 LINE L1 5530 5943 -357 6 1664 327 49 0 0 chrX 141447486 141447527 -25202769 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 1664 429 274 0 8 chrX 141447685 141447803 -25202493 - Lx8 LINE L1 -642 6831 6715 7 1664 6535 77 24 3 chrX 141448355 141449267 -25201029 - L1_Mus1 LINE L1 -1 6566 5546 7 1664 945 272 69 4 chrX 141449271 141449518 -25200778 - Lx5 LINE L1 -255 6795 6533 7 1664 225 444 63 0 chrX 141450487 141450613 -25199683 + B1F2 SINE Alu 1 134 -15 7 1664 1363 280 57 20 chrX 141450652 141451056 -25199240 - MTD LTR MaLR 0 419 1 7 1664 2697 67 9 0 chrX 141451633 141451976 -25198320 - ORR1A1 LTR MaLR 0 346 1 7 1664 2928 92 18 5 chrX 141451997 141452436 -25197860 + Lx3_Mus LINE L1 6565 7009 0 7 1664 601 340 5 5 chrX 141452490 141452688 -25197608 - MER58A DNA MER1_type -26 198 1 7 1664 488 91 8 60 chrX 141453820 141453937 -25196359 + T-rich Low_complexity Low_complexity 2 112 0 7 1664 312 91 0 0 chrX 141454530 141454574 -25195722 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 1664 287 291 13 0 chrX 141454773 141454852 -25195444 + Lx9 LINE L1 6930 7009 -635 7 1664 288 314 105 0 chrX 141454869 141454974 -25195322 - Lx9 LINE L1 -439 7205 7090 7 1664 24 53 0 0 chrX 141455133 141455171 -25195125 + AT_rich Low_complexity Low_complexity 1 38 0 7 1664 37139 62 2 2 chrX 141455394 141461621 -25188675 - L1Md_F3 LINE L1 -12 6572 388 7 1664 1277 311 162 12 chrX 141462692 141463499 -25186797 + Lx8 LINE L1 5993 6917 -779 7 1664 384 59 0 0 chrX 141463506 141463557 -25186739 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1664 489 17 0 0 chrX 141463634 141463692 -25186604 + (TG)n Simple_repeat Simple_repeat 1 58 0 7 1664 281 350 159 23 chrX 141463695 141463996 -25186300 + Lx8 LINE L1 7102 7443 -30 7 1664 2675 34 3 0 chrX 141464006 141464328 -25185968 - L1Md_F2 LINE L1 -2 6580 6258 7 1664 330 318 87 7 chrX 141464347 141464496 -25185800 + B3A SINE B2 38 198 0 7 1664 588 241 116 4 chrX 141464496 141464729 -25185567 + L1P5 LINE L1 5355 5613 -543 7 1664 490 225 42 74 chrX 141464728 141464944 -25185352 + Lx9 LINE L1 7417 7625 -19 7 1664 765 272 20 15 chrX 141464969 141465253 -25185043 + L1MA4 LINE L1 5591 5842 -458 7 1664 207 0 0 0 chrX 141465503 141465526 -25184770 + (CTG)n Simple_repeat Simple_repeat 2 24 0 7 1664 2254 173 10 0 chrX 141466925 141467318 -25182978 - Lx2A1 LINE L1 -6 7002 6606 7 1664 486 33 0 0 chrX 141468519 141468579 -25181717 + (TA)n Simple_repeat Simple_repeat 2 61 0 7 1664 2029 218 27 17 chrX 141468985 141469391 -25180905 - MTD LTR MaLR -9 410 1 7 1664 207 0 0 0 chrX 141469573 141469596 -25180700 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1664 376 365 87 11 chrX 141469633 141469816 -25180480 - MLT1K LTR MaLR -263 332 136 7 1664 676 173 78 16 chrX 141470561 141470690 -25179606 - B1_Mur4 SINE Alu -7 143 7 7 1664 2395 53 86 28 chrX 141471086 141471413 -25178883 - ORR1A1 LTR MaLR 0 346 1 7 1664 10597 76 25 6 chrX 141471413 141471540 -25178756 - ORR1A1-int LTR MaLR 0 1792 1659 7 1664 270 0 0 0 chrX 141471540 141471570 -25178726 + (CAA)n Simple_repeat Simple_repeat 1 30 0 7 1664 10597 76 25 6 chrX 141471570 141472978 -25177318 - ORR1A1-int LTR MaLR -134 1658 229 7 1664 12269 112 23 16 chrX 141472986 141473923 -25176373 - L1_Mus3 LINE L1 -4 6634 5678 7 1664 7203 60 0 0 chrX 141473923 141474830 -25175466 + L1Md_T LINE L1 5676 6582 0 7 1664 270 0 0 0 chrX 141474838 141474868 -25175428 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 7 1664 12269 108 8 12 chrX 141474868 141476501 -25173795 - L1_Mus3 LINE L1 -206 5677 4037 7 1664 459 0 0 0 chrX 141476659 141476710 -25173586 + (TA)n Simple_repeat Simple_repeat 1 51 0 7 1664 543 322 52 14 chrX 141476721 141476932 -25173364 + Lx9 LINE L1 6371 6589 -1055 7 1664 640 103 0 18 chrX 141477402 141477511 -25172785 + (TCC)n Simple_repeat Simple_repeat 2 108 0 7 1664 1642 163 59 110 chrX 141478768 141479140 -25171156 + ORR1B1 LTR MaLR 42 394 0 7 1664 35516 49 0 4 chrX 141479717 141485422 -25164874 + L1Md_T LINE L1 1 5589 -297 7 1664 8397 34 0 0 chrX 141485422 141486418 -25163878 + L1Md_T LINE L1 5590 6585 0 7 1664 396 0 0 0 chrX 141487021 141487065 -25163231 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 1664 24479 27 0 0 chrX 141488356 141491902 -25158394 - L1Md_T LINE L1 0 6582 3037 7 1664 305 322 51 32 chrX 141492723 141492880 -25157416 - RSINE1 SINE B4 -2 163 4 7 1664 2899 165 6 3 chrX 141493375 141493953 -25156343 - Lx5 LINE L1 -979 6071 5486 7 1664 411 268 88 16 chrX 141493955 141494080 -25156216 + Lx5 LINE L1 6509 6642 -408 7 1664 6568 88 19 14 chrX 141494077 141495027 -25155269 + Lx3_Mus LINE L1 6010 6964 -45 7 1664 1049 223 102 12 chrX 141495023 141495406 -25154890 + Lx5 LINE L1 6620 7051 -7 7 1664 762 123 8 32 chrX 141496295 141496421 -25153875 - B2_Mm1t SINE B2 -70 123 1 7 1664 402 348 80 84 chrX 141497509 141498045 -25152251 + Tigger15a DNA TcMar 43 576 -139 7 1664 184 298 17 34 chrX 141498176 141498235 -25152061 - L2c LINE L2 -69 3318 3261 7 1664 208 366 66 58 chrX 141498246 141498487 -25151809 - L2c LINE L2 -553 2866 2624 7 1664 184 302 0 0 chrX 141498623 141498666 -25151630 + MIR3 SINE MIR 121 163 -45 7 1664 289 352 36 36 chrX 141498704 141498869 -25151427 + MER20 DNA MER1_type 32 196 -23 7 1664 403 246 22 7 chrX 141498977 141499112 -25151184 - Lx9 LINE L1 -6 7638 7502 7 1664 623 210 21 7 chrX 141499127 141499271 -25151025 - Lx9 LINE L1 -205 7439 7294 7 1664 471 18 0 0 chrX 141499516 141499572 -25150724 + (TC)n Simple_repeat Simple_repeat 2 57 0 7 1664 290 283 30 20 chrX 141499786 141499887 -25150409 - L2c LINE L2 -956 2463 2362 7 1664 2877 42 0 8 chrX 141500581 141500939 -25149357 + L1Md_F2 LINE L1 6221 6575 -7 1 1664 400 332 39 78 chrX 141501207 141501439 -25148857 + Charlie2b DNA MER1_type 9 231 -2551 2 1664 3048 70 0 52 chrX 141501455 141501893 -25148403 - L1_Mus2 LINE L1 -1 6565 6151 3 1664 552 309 88 27 chrX 141501979 141502207 -25148089 + Charlie2b DNA MER1_type 1201 1439 -1343 2 1664 182 33 67 0 chrX 141502207 141502237 -25148059 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 4 1664 552 309 88 27 chrX 141502237 141502337 -25147959 + Charlie2b DNA MER1_type 1440 1549 -1233 2 1664 433 329 83 48 chrX 141502376 141502606 -25147690 + ORR1E LTR MaLR 4 241 -118 5 1664 28 0 0 0 chrX 141502822 141502850 -25147446 + AT_rich Low_complexity Low_complexity 1 28 0 6 1664 180 97 0 0 chrX 141502883 141502914 -25147382 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 7 1664 1011 75 0 0 chrX 141502914 141503048 -25147248 - B2_Mm2 SINE B2 -32 163 30 8 1664 36 0 0 0 chrX 141503063 141503099 -25147197 + AT_rich Low_complexity Low_complexity 1 36 0 9 1664 454 298 132 10 chrX 141503136 141503424 -25146872 - L1MA6 LINE L1 -55 6245 5923 1 1664 862 315 73 50 chrX 141503427 141503785 -25146511 + MTE2a LTR MaLR 5 370 -9 1 1664 1358 255 15 21 chrX 141503808 141504133 -25146163 + MTE2a-int LTR MaLR 10 332 -1248 1 1664 383 267 115 16 chrX 141504650 141504772 -25145524 + MTD LTR MaLR 6 139 -280 1 1664 470 225 65 32 chrX 141504832 141504956 -25145340 + Lx5 LINE L1 6920 7047 -3 1 1664 497 227 185 7 chrX 141504972 141505123 -25145173 + MTD LTR MaLR 198 375 -44 1 1664 423 0 0 0 chrX 141505139 141505186 -25145110 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 1664 280 323 91 38 chrX 141505216 141505425 -25144871 + Lx8 LINE L1 6974 7193 -280 1 1664 440 322 42 7 chrX 141505763 141505968 -25144328 + MIRb SINE MIR 11 217 -45 1 1664 286 280 97 0 chrX 141506144 141506237 -25144059 + PB1D7 SINE Alu 16 117 -3 1 1664 210 361 158 22 chrX 141507527 141507711 -25142585 - MIRb SINE MIR -40 228 20 1 1664 686 358 54 54 chrX 141507722 141508091 -25142205 - MLT1C LTR MaLR -3 464 90 1 1664 472 245 157 161 chrX 141508091 141508500 -25141796 + MLT1A1 LTR MaLR 1 407 -1 2 1664 686 358 54 54 chrX 141508500 141508594 -25141702 - MLT1C LTR MaLR -378 89 1 1 1664 2806 86 39 5 chrX 141510075 141510482 -25139814 - BGLII LTR ERVK 0 421 1 2 1664 3178 210 39 52 chrX 141510483 141510729 -25139567 - RMER3D-int LTR ERVK -1 2841 2588 2 1664 2823 48 63 16 chrX 141510729 141511107 -25139189 - MTA_Mm LTR MaLR 0 396 1 2 1664 3178 210 39 52 chrX 141511107 141511781 -25138515 - RMER3D-int LTR ERVK -255 2587 1933 2 1664 2088 32 4 0 chrX 141511790 141512038 -25138258 + L1Md_T LINE L1 5338 5586 -297 2 1664 8391 33 0 0 chrX 141512039 141513031 -25137265 + L1Md_T LINE L1 5588 6579 -3 2 1664 225 0 0 0 chrX 141513251 141513276 -25137020 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 2 1664 3547 172 79 58 chrX 141513287 141514127 -25136169 - RMER3D-int LTR ERVK -972 1870 1014 2 1664 261 167 56 124 chrX 141514147 141514183 -25136113 - RMER3D-int LTR ERVK -1907 935 909 2 1664 1042 74 17 28 chrX 141514183 141514364 -25135932 + (TTTCC)n Simple_repeat Simple_repeat 2 180 0 2 1664 531 135 16 32 chrX 141514364 141514457 -25135839 - RMER3D-int LTR ERVK -2274 568 489 2 1664 795 176 0 41 chrX 141514585 141514780 -25135516 - RMER3D-int LTR ERVK -1987 855 669 2 1664 3053 70 22 5 chrX 141514831 141515245 -25135051 - BGLII LTR ERVK 0 421 1 2 1664 399 350 34 0 chrX 141515926 141516043 -25134253 - ID_B1 SINE B4 -13 211 91 2 1664 1015 289 67 40 chrX 141517318 141517872 -25132424 - L1MA5 LINE L1 -378 5922 5354 2 1664 489 296 54 75 chrX 141517887 141518311 -25131985 - L1M3 LINE L1 -1810 4330 3916 3 1664 442 146 21 0 chrX 141518522 141518618 -25131678 + GA-rich Low_complexity Low_complexity 3 100 0 3 1664 189 74 0 0 chrX 141518686 141518713 -25131583 + (TCTA)n Simple_repeat Simple_repeat 2 28 0 3 1664 1019 90 7 7 chrX 141519298 141519443 -25130853 - B1_Mus1 SINE Alu -1 147 3 3 1664 441 0 0 0 chrX 141519511 141519560 -25130736 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 1664 353 383 49 14 chrX 141519635 141519778 -25130518 + MLT1A1 LTR MaLR 261 408 0 3 1664 3813 78 86 32 chrX 141520056 141520613 -25129683 + LTRIS_Mus LTR ERV1 1 587 0 3 1664 285 222 20 109 chrX 141520613 141520705 -25129591 + MIRb SINE MIR 7 93 -175 3 1664 339 105 0 0 chrX 141520781 141520838 -25129458 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1664 279 0 0 0 chrX 141520838 141520868 -25129428 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 1664 1096 101 0 0 chrX 141521025 141521173 -25129123 + B1_Mus1 SINE Alu 1 148 0 4 1664 233 0 62 0 chrX 141521175 141521207 -25129089 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1664 360 64 0 0 chrX 141521210 141521257 -25129039 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 4 1664 327 281 142 43 chrX 141521407 141521548 -25128748 - MIRb SINE MIR -27 241 87 4 1664 321 26 0 0 chrX 141521951 141521989 -25128307 + (TCTA)n Simple_repeat Simple_repeat 4 41 0 4 1664 404 244 0 0 chrX 141521990 141522068 -25128228 - ID_B1 SINE B4 -4 220 143 4 1664 24 0 0 0 chrX 141522996 141523020 -25127276 + AT_rich Low_complexity Low_complexity 1 24 0 4 1664 405 114 88 33 chrX 141523347 141523438 -25126858 + Lx3_Mus LINE L1 6914 7009 0 4 1664 2166 131 72 8 chrX 141523827 141524203 -25126093 + RLTR9D LTR ERVK 1 400 -3 4 1664 39 60 0 0 chrX 141524739 141524806 -25125490 + AT_rich Low_complexity Low_complexity 1 67 0 4 1664 992 286 141 21 chrX 141524819 141525451 -25124845 - L1MA5 LINE L1 0 6300 5593 5 1664 283 295 57 8 chrX 141525598 141525639 -25124657 - L1MA5 LINE L1 -777 5526 5480 5 1664 315 0 0 0 chrX 141525639 141525674 -25124622 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1664 283 295 57 8 chrX 141525674 141525755 -25124541 - L1MA5 LINE L1 -824 5479 5399 5 1664 2394 283 46 33 chrX 141525748 141526655 -25123641 - L1MC1 LINE L1 -4 6504 5586 5 1664 328 242 164 0 chrX 141527055 141527183 -25123113 - L1MC1 LINE L1 -4862 1646 1498 5 1664 272 253 42 10 chrX 141527336 141527432 -25122864 - L1MC1 LINE L1 -5137 1371 1273 5 1664 482 279 82 26 chrX 141527496 141527691 -25122605 - Lx8 LINE L1 -12 7461 7256 5 1664 286 318 53 0 chrX 141527691 141527842 -25122454 - L1MC1 LINE L1 -5336 1172 1014 5 1664 180 152 0 0 chrX 141528201 141528234 -25122062 + CT-rich Low_complexity Low_complexity 2 34 0 5 1664 24627 130 74 17 chrX 141528236 141534134 -25116162 - Lx3C LINE L1 -2 6974 216 5 1664 285 352 28 0 chrX 141534145 141534321 -25115975 - L1MA4 LINE L1 -188 6112 5932 5 1664 594 242 71 42 chrX 141534566 141534734 -25115562 - MTE2a LTR MaLR 0 379 207 5 1664 1217 176 36 20 chrX 141534754 141535003 -25115293 - Lx4A LINE L1 0 7058 6806 5 1664 485 339 5 5 chrX 141535127 141535314 -25114982 - L1MC1 LINE L1 -5743 765 579 5 1664 1281 300 16 18 chrX 141535386 141535821 -25114475 - L1MC1 LINE L1 -5918 590 157 5 1664 1041 83 0 0 chrX 141535828 141535973 -25114323 + (TCTCCC)n Simple_repeat Simple_repeat 4 148 0 5 1664 2804 62 29 8 chrX 141536205 141536582 -25113714 - L1_Mus1 LINE L1 0 6567 6183 6 1664 539 244 210 12 chrX 141538143 141538240 -25112056 - ORR1D1 LTR MaLR 0 384 278 6 1664 264 59 0 0 chrX 141538240 141538274 -25112022 + (CAT)n Simple_repeat Simple_repeat 1 34 0 6 1664 631 234 171 32 chrX 141538274 141538463 -25111833 - ORR1D1 LTR MaLR -107 277 28 6 1664 1988 165 122 0 chrX 141538463 141538814 -25111482 - ORR1B1 LTR MaLR 0 394 1 6 1664 631 234 170 33 chrX 141538814 141538841 -25111455 - ORR1D1 LTR MaLR -347 27 1 6 1664 295 368 40 0 chrX 141539562 141539714 -25110582 + MIRb SINE MIR 53 210 -58 6 1664 1151 62 0 20 chrX 141540523 141540672 -25109624 + B1_Mus2 SINE Alu 1 146 -1 6 1664 623 267 14 0 chrX 141542264 141542410 -25107886 + B1_Mur1 SINE Alu 2 149 0 6 1664 39 32 0 16 chrX 141542524 141542545 -25107751 + AT_rich Low_complexity Low_complexity 1 21 0 6 1664 2722 134 2 19 chrX 141542545 141542977 -25107319 + Lx LINE L1 6213 6637 -17 6 1664 39 32 0 16 chrX 141542977 141543019 -25107277 + AT_rich Low_complexity Low_complexity 1 42 0 6 1664 272 329 14 0 chrX 141543615 141543688 -25106608 + L2a LINE L2 3348 3421 -5 7 1664 198 336 54 63 chrX 141543693 141543804 -25106492 - MIRb SINE MIR -90 178 69 7 1664 286 236 39 16 chrX 141545162 141545291 -25105005 - Lx8 LINE L1 0 7473 7342 7 1664 1268 54 6 0 chrX 141545293 141545459 -25104837 - L1_Mus1 LINE L1 0 6567 6401 7 1664 1204 176 5 5 chrX 141545789 141546011 -25104285 - URR1A DNA MER1_type 0 226 5 7 1664 271 276 176 28 chrX 141547563 141547671 -25102625 + B1F1 SINE Alu 14 137 -12 7 1664 363 60 0 0 chrX 141547896 141547946 -25102350 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1664 284 262 0 48 chrX 141548413 141548497 -25101799 - MTEb LTR MaLR -6 373 294 7 1664 9012 5 1 0 chrX 141548652 141550362 -25099934 - L1Md_A LINE L1 0 6582 4871 7 1664 924 254 50 57 chrX 141551096 141551396 -25098900 + MER46C DNA MER2_type 2 299 -39 7 1664 279 0 0 0 chrX 141551791 141551822 -25098474 + (TA)n Simple_repeat Simple_repeat 1 31 0 8 1664 333 0 0 0 chrX 141551822 141551858 -25098438 + (GA)n Simple_repeat Simple_repeat 2 38 0 8 1664 238 257 119 0 chrX 141551898 141551982 -25098314 - MIRb SINE MIR -133 135 40 8 1664 231 36 0 0 chrX 141552016 141552044 -25098252 + (CA)n Simple_repeat Simple_repeat 2 29 0 8 1664 2777 228 42 47 chrX 141552046 141552671 -25097625 - Lx7 LINE L1 -284 7412 6771 8 1664 1147 62 0 33 chrX 141552671 141552822 -25097474 + B1_Mus2 SINE Alu 2 147 0 8 1664 2777 228 42 47 chrX 141552822 141552905 -25097391 - Lx7 LINE L1 -926 6770 6707 8 1664 302 346 17 80 chrX 141553331 141553507 -25096789 - MER5A1 DNA MER1_type 0 166 2 8 1664 302 330 19 12 chrX 141553586 141553733 -25096563 + MIRb SINE MIR 60 205 -3 8 1664 303 85 0 0 chrX 141555352 141555399 -25094897 + (CAAT)n Simple_repeat Simple_repeat 2 48 0 8 1664 25 0 0 0 chrX 141555399 141555424 -25094872 + AT_rich Low_complexity Low_complexity 1 25 0 8 1664 529 270 42 33 chrX 141557009 141557315 -25092981 + L1M4 LINE L1 4183 4491 -1655 9 1664 306 270 465 20 chrX 141557350 141557758 -25092538 + L1M4 LINE L1 4611 5199 -947 9 25 286 240 31 62 chrX 141557759 141557850 -25092446 + PB1D10 SINE Alu 9 98 -51 9 1665 213 121 0 0 chrX 141557868 141557901 -25092395 + (GGAA)n Simple_repeat Simple_repeat 2 34 0 9 1665 240 303 68 39 chrX 141559038 141559141 -25091155 + MamRep605 Unknown Unknown 537 642 -234 9 1665 197 352 27 18 chrX 141560341 141560451 -25089845 - MIRb SINE MIR -61 207 97 9 1665 326 258 4 16 chrX 141560496 141560605 -25089691 - ID4_ SINE ID -46 106 1 9 1665 889 297 11 36 chrX 141561503 141561795 -25088501 - MTE2b-int LTR MaLR -993 265 2 9 1665 859 309 28 69 chrX 141561796 141562189 -25088107 - MTE2b LTR MaLR 0 379 3 9 1665 269 310 18 39 chrX 141562280 141562418 -25087878 - MIRb SINE MIR -65 203 57 9 1665 988 268 147 3 chrX 141562671 141562963 -25087333 - ORR1D2 LTR MaLR -34 336 3 9 1665 5028 251 30 53 chrX 141562965 141564351 -25085945 - ORR1D2-int LTR MaLR 0 1370 16 9 1665 1045 270 64 55 chrX 141564351 141564414 -25085882 - ORR1D2 LTR MaLR 0 370 322 9 1665 198 0 0 0 chrX 141564414 141564436 -25085860 + (CA)n Simple_repeat Simple_repeat 1 22 0 9 1665 1045 270 64 55 chrX 141564436 141564733 -25085563 - ORR1D2 LTR MaLR -49 321 7 9 1665 276 305 10 50 chrX 141564938 141565038 -25085258 - RMER15 LTR ERVL -109 466 371 1 1665 427 272 40 30 chrX 141565058 141565259 -25085037 - L1MA8 LINE L1 -42 6249 6047 1 1665 768 161 30 30 chrX 141565324 141565491 -25084805 - Lx4B LINE L1 -8 7050 6884 1 1665 556 278 52 77 chrX 141565781 141566147 -25084149 - Lx9 LINE L1 -26 7618 7262 1 1665 386 54 36 0 chrX 141566578 141566634 -25083662 + (CAAAA)n Simple_repeat Simple_repeat 2 59 0 1 1665 823 256 19 10 chrX 141567171 141567380 -25082916 - B3 SINE B2 -1 215 5 1 1665 7764 72 3 1 chrX 141567396 141568980 -25081316 - L1Md_F2 LINE L1 0 6582 4994 1 1665 284 0 28 0 chrX 141568980 141569016 -25081280 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 1665 204 206 87 10 chrX 141569414 141569517 -25080779 + (CATATA)n Simple_repeat Simple_repeat 3 113 0 1 1665 309 300 136 35 chrX 141569968 141570263 -25080033 - L1M2 LINE L1 -507 5790 5476 1 1665 3961 117 7 0 chrX 141570263 141570854 -25079442 - Lx2 LINE L1 0 6997 6403 1 1665 259 243 65 42 chrX 141570854 141570970 -25079326 - L1M2 LINE L1 -679 5477 5371 1 1665 2008 192 58 10 chrX 141570970 141571364 -25078932 + MTC LTR MaLR 1 413 -8 1 1665 4604 204 40 26 chrX 141571372 141572474 -25077822 + MTC-int LTR MaLR 3 1258 0 1 1665 1980 194 60 15 chrX 141572474 141572877 -25077419 + MTC LTR MaLR 1 421 0 1 1665 358 305 104 16 chrX 141572888 141573138 -25077158 - L1_Rod LINE L1 -543 5304 5033 1 1665 309 288 26 18 chrX 141573131 141573244 -25077052 - L1M4 LINE L1 -1124 5022 4909 1 1665 2726 56 3 16 chrX 141573245 141573610 -25076686 - L1Md_F2 LINE L1 -2 6580 6221 1 1665 1027 26 0 0 chrX 141573610 141573727 -25076569 + L1Md_F2 LINE L1 6148 6264 -318 1 1665 1087 294 57 98 chrX 141573775 141574380 -25075916 - L1_Mur3 LINE L1 -1251 4892 4283 1 1665 813 245 67 5 chrX 141574380 141574573 -25075723 - B3 SINE B2 -9 207 3 1 1665 967 294 57 98 chrX 141574573 141574634 -25075662 - L1_Mur3 LINE L1 -1598 4282 4222 1 1665 346 222 85 43 chrX 141574649 141574743 -25075553 - URR1B DNA MER1_type 0 225 128 1 1665 11229 36 1 5 chrX 141574748 141576796 -25073500 - L1Md_F2 LINE L1 -1 6581 4545 1 1665 404 40 0 0 chrX 141576792 141576842 -25073454 + L1_Mm LINE L1 4278 4327 -1556 1 1665 3255 156 12 5 chrX 141576842 141577401 -25072895 - Lx LINE L1 -16 6638 6076 1 1665 721 114 187 0 chrX 141577402 141577525 -25072771 - URR1B DNA MER1_type -80 145 1 1 1665 961 266 48 17 chrX 141577526 141577882 -25072414 - L1_Mur3 LINE L1 -1669 4211 3845 1 1665 1553 210 44 3 chrX 141577884 141578199 -25072097 - L1_Mur3 LINE L1 -6646 1082 755 1 1665 1526 164 58 107 chrX 141578220 141578595 -25071701 - RMER6C LTR ERVK -4 686 337 1 1665 891 94 0 0 chrX 141578595 141578744 -25071552 + (TC)n Simple_repeat Simple_repeat 2 150 0 1 1665 1526 164 58 107 chrX 141578744 141578797 -25071499 - RMER6C LTR ERVK -354 336 279 1 1665 8440 86 0 5 chrX 141578797 141580702 -25069594 + L1_Mus1 LINE L1 4668 6567 0 1 1665 1856 127 25 0 chrX 141580702 141580986 -25069310 - RMER6C LTR ERVK -399 291 1 1 1665 1380 232 29 68 chrX 141580996 141581408 -25068888 - L1_Mur3 LINE L1 -7023 689 294 1 1665 228 256 238 8 chrX 141582398 141582524 -25067772 + L1MA10 LINE L1 6098 6252 -82 1 1665 308 282 0 34 chrX 141582581 141582669 -25067627 - BC1_Mm scRNA scRNA -49 103 19 1 1665 2769 180 73 30 chrX 141583617 141584194 -25066102 - RLTR18 LTR ERVK -5 611 10 1 1665 266 270 173 117 chrX 141584276 141584348 -25065948 - MIRb SINE MIR -23 245 186 1 1665 958 84 0 7 chrX 141584348 141584492 -25065804 - L1_Mus2 LINE L1 0 6566 6424 1 1665 266 270 173 117 chrX 141584492 141584616 -25065680 - MIRb SINE MIR -83 185 38 1 1665 470 261 39 13 chrX 141584750 141584905 -25065391 + Lx7 LINE L1 7534 7692 -4 1 1665 268 237 69 49 chrX 141585290 141585392 -25064904 + MTEa LTR MaLR 276 379 0 1 1665 2124 249 106 18 chrX 141585997 141586504 -25063792 - Lx6 LINE L1 -26 7434 6878 1 1665 369 0 0 0 chrX 141586504 141586545 -25063751 + (TC)n Simple_repeat Simple_repeat 1 41 0 1 1665 2124 249 106 18 chrX 141586545 141586604 -25063692 - Lx6 LINE L1 -583 6877 6818 1 1665 4082 60 4 8 chrX 141586665 141587201 -25063095 - L1Md_F2 LINE L1 -2 6580 6047 1 1665 404 42 0 0 chrX 141587201 141587249 -25063047 + L1Md_F2 LINE L1 5966 6013 -569 1 1665 483 293 65 20 chrX 141587338 141587491 -25062805 - MER5B DNA MER1_type -17 161 2 1 1665 348 250 54 24 chrX 141587692 141587860 -25062436 + C-rich Low_complexity Low_complexity 5 177 0 1 1665 471 18 0 0 chrX 141588060 141588116 -25062180 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 1 1665 355 245 212 85 chrX 141588934 141589193 -25061103 - Lx8 LINE L1 -5 7468 7177 1 1665 497 310 12 12 chrX 141589224 141589384 -25060912 + Lx8 LINE L1 7051 7210 -263 1 1665 1856 208 57 25 chrX 141590788 141591227 -25059069 + RMER1C Other Other 890 1342 0 1 1665 190 349 26 0 chrX 141591265 141591349 -25058947 - MIR SINE MIR -116 152 65 1 1665 242 216 39 0 chrX 141591391 141591442 -25058854 + B4A SINE B4 217 269 -23 1 1665 207 0 0 0 chrX 141591471 141591494 -25058802 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1665 502 324 83 19 chrX 141592262 141592459 -25057837 + Lx8 LINE L1 7133 7332 -141 1 1665 411 21 0 0 chrX 141592459 141592507 -25057789 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1665 502 324 83 19 chrX 141592507 141592621 -25057675 + Lx8 LINE L1 7333 7463 -10 1 1665 2331 205 112 8 chrX 141592647 141593247 -25057049 - Lx9 LINE L1 -146 7498 6837 1 1665 444 192 45 53 chrX 141593250 141593382 -25056914 + Lx9 LINE L1 7514 7644 0 1 1665 579 198 43 8 chrX 141593608 141593725 -25056571 + Lx9 LINE L1 7329 7449 -195 1 1665 183 204 0 0 chrX 141593868 141593912 -25056384 + A-rich Low_complexity Low_complexity 2 45 0 1 1665 234 291 47 0 chrX 141594156 141594242 -25056054 + MLT1A1 LTR MaLR 300 389 -19 1 1665 354 375 44 0 chrX 141594298 141594434 -25055862 + ID_B1 SINE B4 5 146 -78 1 1665 3697 130 40 0 chrX 141594435 141595013 -25055283 + L1_Mm LINE L1 5274 5874 -9 1 1665 556 14 14 14 chrX 141595189 141595263 -25055033 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 1 1665 5265 105 15 14 chrX 141595263 141596044 -25054252 + Lx LINE L1 5870 6651 -3 1 1665 390 22 0 0 chrX 141596079 141596124 -25054172 - L1Md_F2 LINE L1 -331 6251 6207 1 1665 396 264 71 7 chrX 141596143 141596284 -25054012 - L1M2 LINE L1 -776 5367 5218 1 1665 4601 196 88 29 chrX 141596380 141597407 -25052889 - Lx7 LINE L1 0 7696 6610 1 1665 1780 251 13 36 chrX 141597500 141597975 -25052321 + Lx7 LINE L1 5999 6462 -1234 1 1665 438 296 50 36 chrX 141598189 141598329 -25051967 + RSINE1 SINE B4 3 144 -21 1 1665 1559 254 17 102 chrX 141598443 141598983 -25051313 - Lx9 LINE L1 -636 7008 6515 1 1665 421 202 24 8 chrX 141598986 141599111 -25051185 + Lx9 LINE L1 7498 7624 -20 1 1665 632 306 31 37 chrX 141599147 141599497 -25050799 - L1M3 LINE L1 -1310 4830 4483 1 1665 316 359 56 37 chrX 141599652 141599814 -25050482 - MIR SINE MIR -38 224 60 1 1665 2782 144 21 31 chrX 141600370 141601217 -25049079 + L1_Mur1 LINE L1 680 1646 -4240 1 1665 1137 88 0 0 chrX 141601217 141601364 -25048932 + B1_Mus2 SINE Alu 1 147 0 1 1665 2588 154 17 93 chrX 141601364 141601554 -25048742 + L1_Mur1 LINE L1 1637 1772 -4111 1 1665 4842 67 0 0 chrX 141601554 141602164 -25048132 - L1_Mus2 LINE L1 -1 6565 5956 1 1665 2463 209 20 187 chrX 141602164 141602189 -25048107 + L1_Mur1 LINE L1 1773 1773 -4110 1 1665 1994 45 8 0 chrX 141602189 141602436 -25047860 - L1Md_A LINE L1 -2 6580 6332 1 1665 2463 209 20 187 chrX 141602436 141602998 -25047298 + L1_Mur1 LINE L1 1773 2219 -3664 1 1665 1729 142 132 3 chrX 141602991 141603331 -25046965 + Lx3C LINE L1 6575 6958 -18 1 1665 317 316 75 8 chrX 141603364 141603498 -25046798 + L1MB5 LINE L1 5762 5904 -270 1 1665 490 188 22 0 chrX 141604866 141605004 -25045292 - Lx9 LINE L1 -1 7643 7503 1 1665 411 202 0 0 chrX 141605136 141605230 -25045066 + GA-rich Low_complexity Low_complexity 1 94 0 1 1665 353 382 29 14 chrX 141605860 141606070 -25044226 + MIRb SINE MIR 10 222 -46 1 1665 445 302 16 0 chrX 141606490 141606672 -25043624 + L1M2 LINE L1 4599 4783 -1360 1 1665 569 339 57 65 chrX 141607060 141607429 -25042867 + ORR1D2 LTR MaLR 1 366 -4 1 1665 1493 336 40 59 chrX 141607462 141607656 -25042640 + MTE-int LTR MaLR 49 231 -1349 1 1665 2406 153 7 7 chrX 141607656 141608077 -25042219 + Lx2 LINE L1 6573 6993 -4 1 1665 1493 336 40 59 chrX 141608077 141608530 -25041766 + MTE-int LTR MaLR 232 684 -896 1 1665 3547 253 113 29 chrX 141608557 141610644 -25039652 + Lx9 LINE L1 5239 7631 -13 1 1665 593 329 65 18 chrX 141610685 141610902 -25039394 + MTE-int LTR MaLR 702 928 -652 1 1665 1579 136 62 0 chrX 141610954 141611211 -25039085 + Lx2 LINE L1 6562 6834 -163 1 1665 306 0 0 0 chrX 141613284 141613318 -25036978 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1665 286 271 11 66 chrX 141613414 141613492 -25036804 + Lx8 LINE L1 6313 6388 -1085 1 1665 1829 184 126 0 chrX 141613492 141613866 -25036430 - MTC LTR MaLR 0 421 1 1 1665 1947 331 165 5 chrX 141613866 141614615 -25035681 + Lx8 LINE L1 6389 7256 -217 1 1665 240 200 300 0 chrX 141614556 141614646 -25035650 + RMER1C Other Other 1076 1192 -150 1 1665 534 31 0 0 chrX 141615206 141615270 -25035026 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 1665 206 250 0 26 chrX 141615522 141615600 -25034696 + (TATG)n Simple_repeat Simple_repeat 1 76 0 1 1665 1164 287 7 7 chrX 141615602 141615893 -25034403 - B4 SINE B4 0 292 2 1 1665 1524 272 161 16 chrX 141615906 141616697 -25033599 - L1MA8 LINE L1 -24 6267 5363 1 1665 527 268 66 47 chrX 141616737 141617054 -25033242 - L1MA8 LINE L1 -841 5302 4980 1 1665 636 14 0 0 chrX 141617231 141617304 -25032992 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 1665 207 0 0 0 chrX 141617304 141617326 -25032970 + (GA)n Simple_repeat Simple_repeat 2 24 0 1 1665 3091 221 112 19 chrX 141617328 141618129 -25032167 - Lx7 LINE L1 -277 7419 6544 1 1665 300 289 8 0 chrX 141618314 141618435 -25031861 - L1MA8 LINE L1 -1583 4560 4439 1 1665 459 380 131 34 chrX 141618443 141618794 -25031502 - LTR16A1 LTR ERVL -38 418 34 1 1665 347 436 74 18 chrX 141618828 141619113 -25031183 + MLT1N2 LTR MaLR 27 327 -235 1 1665 923 321 112 25 chrX 141619201 141619639 -25030657 - MER90a LTR ERV1 -138 476 1 1 1665 387 0 0 0 chrX 141619713 141619756 -25030540 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1665 198 280 0 0 chrX 141620721 141620771 -25029525 + L2c LINE L2 3338 3387 0 1 1665 423 0 0 0 chrX 141621221 141621268 -25029028 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1665 324 70 0 0 chrX 141621423 141621466 -25028830 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1665 400 326 40 25 chrX 141621784 141621982 -25028314 + MIRb SINE MIR 68 268 0 1 1665 1147 180 32 5 chrX 141622608 141622826 -25027470 - URR1A DNA MER1_type -1 225 2 1 1665 250 300 0 0 chrX 141622964 141623034 -25027262 + MER5B DNA MER1_type 76 145 -33 1 1665 302 215 236 0 chrX 141623041 141623185 -25027111 + MER53 DNA hAT 10 187 -6 1 1665 271 345 36 76 chrX 141623467 141623512 -25026784 - Lx9 LINE L1 -99 7374 7337 1 1665 351 0 0 0 chrX 141623512 141623551 -25026745 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1665 365 325 48 28 chrX 141623551 141623756 -25026540 - Lx9 LINE L1 -215 7429 7134 1 1665 34747 56 25 2 chrX 141624175 141629980 -25020316 - L1Md_F2 LINE L1 -12 6570 671 2 1665 213 327 16 20 chrX 141631156 141631240 -25019056 + L2c LINE L2 3254 3333 -54 2 1665 896 271 5 0 chrX 141631867 141632074 -25018222 + B3 SINE B2 3 210 -6 2 1665 322 320 20 122 chrX 141632883 141633218 -25017078 + L1M2 LINE L1 5295 5597 -700 2 1665 292 292 37 37 chrX 141633214 141633349 -25016947 + L1_Rod LINE L1 5659 5793 -54 2 1665 240 221 215 27 chrX 141633668 141633817 -25016479 - Lx8 LINE L1 -1 7472 7296 2 1665 5707 68 15 0 chrX 141633868 141634615 -25015681 - L1_Mus3 LINE L1 -2 6636 5879 2 1665 271 309 128 48 chrX 141634616 141634803 -25015493 - Lx8 LINE L1 -526 6947 6746 2 1665 309 303 86 103 chrX 141634817 141635049 -25015247 + MLT1E3 LTR MaLR 59 286 -274 2 1665 1383 257 84 3 chrX 141635054 141635397 -25014899 - MTD LTR MaLR -1 418 48 2 1665 342 393 52 30 chrX 141635440 141635710 -25014586 + MLT1E3 LTR MaLR 349 624 0 2 1665 4079 120 14 0 chrX 141636083 141636675 -25013621 + L1VL4 LINE L1 217 816 -5486 2 1665 20467 17 0 0 chrX 141637574 141639948 -25010348 + L1Md_T LINE L1 3214 5586 -297 2 1665 8505 30 0 0 chrX 141639948 141640944 -25009352 + L1Md_T LINE L1 5587 6582 0 2 1665 1096 77 0 0 chrX 141641455 141641598 -25008698 + B1_Mus2 SINE Alu 5 147 0 2 1665 363 121 0 0 chrX 141641598 141641656 -25008640 + (A)n Simple_repeat Simple_repeat 1 58 0 2 1665 363 23 0 0 chrX 141642203 141642247 -25008049 + (TATG)n Simple_repeat Simple_repeat 4 47 0 2 1665 456 270 42 7 chrX 141642248 141642394 -25007902 + MTD LTR MaLR 22 205 -214 2 1665 7423 65 7 35 chrX 141642394 141643425 -25006871 + L1_Mus2 LINE L1 5588 6566 0 2 1665 821 239 71 5 chrX 141643427 141643637 -25006659 + MTD LTR MaLR 196 419 0 2 1665 754 175 7 42 chrX 141643920 141644063 -25006233 + B1_Mur4 SINE Alu 3 140 -10 2 1665 421 303 48 8 chrX 141644154 141644400 -25005896 - RMER15 LTR ERVL -16 559 277 2 1665 207 0 0 0 chrX 141644583 141644606 -25005690 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1665 609 150 0 0 chrX 141644606 141644753 -25005543 + (GA)n Simple_repeat Simple_repeat 1 147 0 2 1665 228 325 25 25 chrX 141644788 141644908 -25005388 - L1_Mur3 LINE L1 -1613 4267 4148 2 1665 396 0 0 0 chrX 141645304 141645348 -25004948 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1665 229 320 111 92 chrX 141645864 141646180 -25004116 + L2b LINE L2 2282 2603 -816 2 1665 260 291 189 33 chrX 141646324 141646477 -25003819 + L2b LINE L2 3250 3426 0 2 1665 282 303 0 33 chrX 141646713 141646805 -25003491 + MLT1A1 LTR MaLR 20 108 -300 2 1665 226 250 47 0 chrX 141647066 141647130 -25003166 + MTEb LTR MaLR 309 375 -4 2 1665 360 0 0 0 chrX 141648480 141648520 -25001776 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1665 22 35 0 0 chrX 141648642 141648671 -25001625 + AT_rich Low_complexity Low_complexity 1 29 0 2 1665 203 307 63 45 chrX 141649155 141649317 -25000979 + L2a LINE L2 3251 3378 -48 2 1665 1275 320 40 2 chrX 141649957 141650427 -24999869 + Lx8 LINE L1 6751 7238 -235 2 1665 3785 244 39 17 chrX 141650437 141651122 -24999174 - Lx5 LINE L1 0 7050 6349 2 1665 3210 58 0 33 chrX 141651122 141651548 -24998748 - L1_Mus1 LINE L1 0 6567 6156 2 1665 3785 244 39 17 chrX 141651548 141651759 -24998537 - Lx5 LINE L1 -702 6348 6134 2 1665 2714 163 39 33 chrX 141651796 141652086 -24998210 + Lx5 LINE L1 5587 5877 -1173 2 1665 1867 71 58 91 chrX 141652086 141652394 -24997902 + L1_Mus2 LINE L1 6269 6566 0 2 1665 2714 163 39 33 chrX 141652394 141652643 -24997653 + Lx5 LINE L1 5878 6128 -922 2 1665 389 273 75 54 chrX 141652618 141652765 -24997531 + Lx8 LINE L1 7207 7356 -117 2 1665 5903 123 11 7 chrX 141653126 141654072 -24996224 - Lx3A LINE L1 -9 6972 6024 2 1665 27 62 0 0 chrX 141654457 141654505 -24995791 + AT_rich Low_complexity Low_complexity 1 48 0 2 1665 21 36 0 0 chrX 141654584 141654612 -24995684 + AT_rich Low_complexity Low_complexity 1 28 0 2 1665 533 306 46 6 chrX 141654614 141654788 -24995508 - B3A SINE B2 -16 182 2 2 1665 263 364 11 0 chrX 141654832 141654920 -24995376 - MIRc SINE MIR -60 208 120 2 1665 971 166 0 23 chrX 141655543 141655711 -24994585 - ORR1C1 LTR MaLR -12 366 203 2 1665 793 240 68 57 chrX 141655711 141656047 -24994249 + RLTR15 LTR ERVK 1 340 -19 2 1665 1006 214 30 5 chrX 141656060 141656262 -24994034 - ORR1C1 LTR MaLR -169 209 3 2 1665 629 334 52 67 chrX 141656563 141657009 -24993287 - MT2A LTR ERVL -74 459 21 2 1665 689 273 66 0 chrX 141657022 141657220 -24993076 + B3 SINE B2 1 211 -5 2 1665 21 36 0 0 chrX 141657912 141657940 -24992356 + AT_rich Low_complexity Low_complexity 1 28 0 2 1665 1796 199 16 57 chrX 141658110 141658493 -24991803 - ORR1C1 LTR MaLR -8 370 4 2 1665 503 254 202 6 chrX 141658766 141658944 -24991352 - Lx5 LINE L1 -3 7047 6835 2 1665 201 316 29 48 chrX 141659007 141659110 -24991186 + MER5B DNA MER1_type 53 153 -25 2 1665 239 353 95 13 chrX 141659830 141659988 -24990308 + MER5A DNA MER1_type 4 174 -15 2 1665 192 77 0 0 chrX 141660719 141660745 -24989551 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 1665 1743 145 40 3 chrX 141661403 141661700 -24988596 - Lx5 LINE L1 -1 7049 6742 2 1665 387 167 0 0 chrX 141662329 141662401 -24987895 + L1_Mur1 LINE L1 5210 5281 -605 2 1665 835 315 74 41 chrX 141662498 141663186 -24987110 + L1ME2 LINE L1 5426 6136 -28 2 1665 1033 294 41 18 chrX 141663483 141663822 -24986474 - MLT2B4 LTR ERVL -205 351 5 2 1665 1745 148 151 0 chrX 141664233 141664565 -24985731 - Lx2B LINE L1 -87 5799 5418 2 1665 4812 192 48 22 chrX 141664543 141665109 -24985187 + Lx2B LINE L1 5878 6451 -549 2 1665 2363 103 19 19 chrX 141665109 141665474 -24984822 + RLTR8 LTR ERVK 1 365 0 2 1665 4812 192 48 22 chrX 141665474 141665942 -24984354 + Lx2B LINE L1 6452 6939 -61 2 1665 789 300 155 16 chrX 141665923 141666310 -24983986 + Lx7 LINE L1 6429 6869 -827 2 1665 1395 284 51 22 chrX 141666811 141667357 -24982939 + Lx7 LINE L1 6888 7467 -6 2 1665 318 349 63 0 chrX 141667393 141667519 -24982777 - B1F SINE Alu -2 147 14 2 1665 591 246 21 32 chrX 141667654 141667822 -24982474 + B3 SINE B2 50 216 0 2 1665 264 259 0 0 chrX 141667864 141667918 -24982378 + ID4 SINE ID 19 72 -11 2 1665 468 0 0 0 chrX 141667924 141667976 -24982320 + (GA)n Simple_repeat Simple_repeat 2 53 0 2 1665 229 241 17 0 chrX 141668128 141668186 -24982110 - Charlie2b DNA MER1_type -932 1850 1792 2 1665 39458 5 0 0 chrX 141668533 141674767 -24975529 - L1Md_A LINE L1 -1 6581 349 2 1665 302 331 8 8 chrX 141674811 141674939 -24975357 - L1MD3 LINE L1 -1 7994 7867 2 1665 563 295 52 36 chrX 141674949 141675197 -24975099 + MLT2B1 LTR ERVL 258 567 0 2 1665 29839 95 9 12 chrX 141675507 141680906 -24969390 + L1Md_F2 LINE L1 199 5585 -298 2 1665 7022 79 27 4 chrX 141680907 141681880 -24968416 + L1Md_F2 LINE L1 5587 6581 -1 2 1665 434 305 52 36 chrX 141681892 141682144 -24968152 - Charlie2b DNA MER1_type -1316 1466 1211 2 1665 499 373 82 48 chrX 141682707 141682748 -24967548 - LTR16E2 LTR ERVL -5 563 536 2 1665 3321 31 13 3 chrX 141682748 141683139 -24967157 - MTA_Mm LTR MaLR -1 395 1 2 1665 499 373 82 48 chrX 141683139 141683390 -24966906 - LTR16E2 LTR ERVL -33 535 262 2 1665 573 350 121 4 chrX 141684495 141684776 -24965520 + MER21B LTR ERV1 3 316 -547 2 1665 753 306 91 8 chrX 141684833 141685087 -24965209 + ORR1E LTR MaLR 85 359 0 2 1665 1504 326 71 10 chrX 141685104 141685600 -24964696 + MER21B LTR ERV1 329 854 -9 2 1665 225 374 0 10 chrX 141685784 141685884 -24964412 - MIRb SINE MIR -81 187 89 2 1665 1184 75 0 0 chrX 141685923 141686083 -24964213 - L1_Mus3 LINE L1 -267 6299 6140 2 1665 1533 98 4 81 chrX 141686084 141686358 -24963938 + L1_Mus3 LINE L1 6320 6638 0 2 1665 1458 256 83 11 chrX 141686372 141686735 -24963561 - MTD LTR MaLR -30 389 1 2 1665 251 384 18 0 chrX 141687748 141687860 -24962436 - L2 LINE L2 -575 2844 2731 2 1665 2679 72 0 6 chrX 141687860 141688222 -24962074 - L1_Mus1 LINE L1 -621 5946 5587 2 1665 4414 57 93 2 chrX 141688230 141688809 -24961487 + L1_Mus1 LINE L1 5935 6566 -1 2 1666 309 274 64 78 chrX 141688837 141689055 -24961241 - L2 LINE L2 -703 2716 2502 2 1666 2181 311 40 42 chrX 141689075 141690451 -24959845 + Lx8 LINE L1 5375 6768 -705 2 1666 254 246 78 17 chrX 141690452 141690568 -24959728 + Lx8 LINE L1 6162 6284 -1189 2 1666 417 195 119 0 chrX 141690597 141690715 -24959581 - MER2 DNA MER2_type -80 265 134 2 1666 1933 73 0 0 chrX 141690789 141691049 -24959247 - L1Md_F2 LINE L1 -282 5601 5342 2 1666 2137 61 0 0 chrX 141691040 141691317 -24958979 + L1Md_F2 LINE L1 5606 5882 -700 2 1666 1520 278 88 16 chrX 141691325 141691880 -24958416 + Lx8 LINE L1 6640 7234 -239 2 1666 435 212 44 1 chrX 141691880 141691985 -24958311 + MTE2a LTR MaLR 280 419 -2 2 1666 1145 82 0 0 chrX 141693199 141693345 -24956951 + B1_Mm SINE Alu 2 147 0 2 1666 749 115 16 0 chrX 141693347 141693469 -24956827 + (GAAAA)n Simple_repeat Simple_repeat 1 124 0 2 1666 2519 20 40 0 chrX 141694364 141694664 -24955632 + L1Md_F3 LINE L1 6259 6570 -14 2 1666 246 276 68 20 chrX 141694825 141694938 -24955358 - MIRb SINE MIR -100 162 46 2 1666 824 301 30 92 chrX 141695054 141695355 -24954941 - MLT1B LTR MaLR 0 390 97 2 1666 280 239 15 0 chrX 141695355 141695422 -24954874 - ID4 SINE ID -14 69 2 2 1666 824 301 30 92 chrX 141695422 141695523 -24954773 - MLT1B LTR MaLR -294 96 13 2 1666 1134 296 126 16 chrX 141696871 141697324 -24952972 - MLT1E2 LTR MaLR -14 613 111 2 1666 226 262 38 0 chrX 141698173 141698253 -24952043 + GA-rich Low_complexity Low_complexity 3 85 0 2 1666 2111 63 0 4 chrX 141700373 141700644 -24949652 - L1_Mus1 LINE L1 0 6567 6298 2 1666 4056 48 2 6 chrX 141700849 141701348 -24948948 - L1Md_F2 LINE L1 -12 6570 6074 2 1666 10298 54 4 25 chrX 141701348 141701803 -24948493 + ORR1A0-int LTR MaLR 408 862 -930 2 1666 844 45 14 29 chrX 141701803 141701942 -24948354 + L1Md_F3 LINE L1 6448 6584 0 2 1666 10298 54 4 25 chrX 141701942 141702901 -24947395 + ORR1A0-int LTR MaLR 863 1792 0 2 1666 3022 29 0 0 chrX 141702901 141703247 -24947049 + ORR1A0 LTR MaLR 1 346 0 2 1666 581 152 33 7 chrX 141703248 141703400 -24946896 + Lx9 LINE L1 7485 7640 -4 2 1666 23 54 0 0 chrX 141703413 141703450 -24946846 + AT_rich Low_complexity Low_complexity 1 37 0 2 1666 619 308 22 10 chrX 141703615 141703846 -24946450 - Lx7 LINE L1 -361 7335 7115 2 1666 1931 184 119 12 chrX 141704895 141705323 -24944973 + Lx5 LINE L1 6484 6957 -93 2 1666 1184 68 0 0 chrX 141705460 141705607 -24944689 + B1_Mus1 SINE Alu 2 148 0 2 1666 714 302 123 29 chrX 141705717 141706056 -24944240 + MTD LTR MaLR 8 345 -34 2 1666 733 278 104 15 chrX 141706856 141707115 -24943181 - B4A SINE B4 -6 286 5 2 1666 294 284 0 0 chrX 141707187 141707275 -24943021 + L1MA4 LINE L1 5852 5939 -361 2 1666 351 305 79 0 chrX 141707433 141707636 -24942660 - L1M5 LINE L1 -1201 4945 4727 2 1666 197 386 23 8 chrX 141708038 141708171 -24942125 - L2 LINE L2 -735 2684 2550 3 1666 881 183 5 61 chrX 141708418 141708616 -24941680 - MTC-int LTR MaLR -1014 244 58 3 1666 1940 301 68 22 chrX 141708618 141709424 -24940872 - Lx8 LINE L1 -246 7227 6385 3 1666 977 224 11 4 chrX 141709482 141709529 -24940767 + MTD LTR MaLR 5 52 -355 3 1666 1474 67 5 0 chrX 141709529 141709722 -24940574 + L1_Mus2 LINE L1 6372 6565 -1 3 1666 1343 237 18 40 chrX 141709722 141709842 -24940454 + MTD LTR MaLR 97 214 -205 3 1666 2280 171 8 3 chrX 141709842 141710234 -24940062 - ORR1B1 LTR MaLR 0 394 1 3 1666 1343 237 18 40 chrX 141710234 141710442 -24939854 + MTD LTR MaLR 215 418 -1 3 1666 6522 85 45 1 chrX 141710854 141712511 -24937785 + L1_Mus2 LINE L1 4843 6566 0 3 1666 22 0 0 0 chrX 141712537 141712559 -24937737 + AT_rich Low_complexity Low_complexity 1 22 0 3 1666 714 204 8 15 chrX 141712618 141712752 -24937544 + B1_Mur3 SINE Alu 1 133 -16 3 1666 377 306 35 86 chrX 141712756 141712953 -24937343 - L2 LINE L2 -907 2512 2326 3 1666 235 329 110 24 chrX 141713070 141713221 -24937075 - MIRb SINE MIR -120 156 6 3 1666 594 408 15 35 chrX 141715216 141715559 -24934737 + LTR33 LTR ERVL 10 345 -170 3 1666 36024 44 4 3 chrX 141715815 141722258 -24928038 - L1Md_T LINE L1 0 6585 41 3 1666 318 292 14 0 chrX 141723076 141723148 -24927148 - ID_B1 SINE B4 -7 217 145 3 1666 229 127 151 27 chrX 141723868 141723941 -24926355 - Lx5 LINE L1 -3 7047 6966 3 1666 1476 180 75 30 chrX 141723943 141724276 -24926020 + Lx5 LINE L1 6035 6382 -668 3 1666 414 39 0 0 chrX 141726041 141726093 -24924203 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1666 587 213 0 35 chrX 141726094 141726235 -24924061 - Lx9 LINE L1 -226 7418 7283 3 1666 296 321 142 19 chrX 141726453 141726615 -24923681 - MIR SINE MIR -20 242 61 3 1666 5515 38 6 0 chrX 141727570 141728225 -24922071 - L1Md_F2 LINE L1 -1 6581 5923 3 1666 532 232 0 0 chrX 141728865 141728964 -24921332 + ORR1D1 LTR MaLR 6 104 -270 3 1666 10913 24 0 0 chrX 141728965 141730980 -24919316 - L1Md_T LINE L1 0 6582 4568 3 1666 1168 225 26 43 chrX 141730980 141731267 -24919029 + ORR1D1 LTR MaLR 28 330 -44 3 1666 229 37 0 0 chrX 141731654 141731681 -24918615 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1666 429 206 0 0 chrX 141731685 141731777 -24918519 + (TA)n Simple_repeat Simple_repeat 1 92 0 3 1666 4362 159 55 24 chrX 141734502 141734750 -24915546 - RLTR13D6 LTR ERVK 0 902 645 3 1666 348 77 0 0 chrX 141734750 141734802 -24915494 + (CTG)n Simple_repeat Simple_repeat 1 52 0 3 1666 4362 159 55 24 chrX 141734802 141735428 -24914868 - RLTR13D6 LTR ERVK -258 644 3 3 1666 620 247 132 51 chrX 141735478 141735648 -24914648 + RLTR11A2 LTR ERVK 1 172 -355 3 1666 180 0 0 0 chrX 141735648 141735668 -24914628 + (GAGAA)n Simple_repeat Simple_repeat 5 24 0 3 1666 620 293 36 72 chrX 141735668 141735997 -24914299 + RLTR11A2 LTR ERVK 160 489 -39 3 1666 6544 31 5 0 chrX 141736106 141736879 -24913417 + L1Md_F2 LINE L1 5794 6570 -12 3 1666 234 0 0 0 chrX 141736906 141736932 -24913364 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 1666 929 156 0 26 chrX 141737016 141737167 -24913129 + B1_Mur1 SINE Alu 1 147 -2 3 1666 196 261 15 44 chrX 141738975 141739043 -24911253 - MIRb SINE MIR -11 257 192 3 1666 3484 18 5 0 chrX 141739286 141739680 -24910616 - MTA_Mm LTR MaLR 0 396 1 3 1666 316 403 26 13 chrX 141740682 141740911 -24909385 + MIRb SINE MIR 3 234 -34 3 1666 1250 34 0 0 chrX 141741553 141741699 -24908597 + B1_Mm SINE Alu 2 147 0 3 1666 306 0 0 0 chrX 141741699 141741733 -24908563 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1666 208 362 25 0 chrX 141742440 141742520 -24907776 - MIR SINE MIR -63 145 64 3 1666 253 248 127 8 chrX 141742861 141742995 -24907301 - L1MA9 LINE L1 -40 6272 6123 3 1666 183 254 142 50 chrX 141743185 141743305 -24906991 - MIRb SINE MIR -125 143 13 3 1666 1443 135 21 12 chrX 141743356 141743596 -24906700 + Lx4A LINE L1 6817 7058 0 3 1666 22 0 0 0 chrX 141743596 141743618 -24906678 + AT_rich Low_complexity Low_complexity 1 22 0 3 1666 317 298 125 37 chrX 141743956 141744092 -24906204 - MIR SINE MIR -90 178 31 3 1666 2082 254 14 20 chrX 141744117 141744612 -24905684 + RCHARR1 DNA MER1_type 1 492 -482 3 1666 1143 272 57 15 chrX 141744617 141744838 -24905458 + Lx7 LINE L1 7092 7313 -383 3 1666 3941 54 0 0 chrX 141744838 141745323 -24904973 - L1Md_F2 LINE L1 -8 6574 6090 3 1666 1143 284 33 27 chrX 141745323 141745642 -24904654 + Lx7 LINE L1 7314 7680 -16 3 1666 1233 258 87 13 chrX 141745685 141746144 -24904152 + RCHARR1 DNA MER1_type 481 973 -1 3 1666 845 265 58 65 chrX 141746249 141746540 -24903756 - MTEa LTR MaLR -90 289 1 3 1666 221 167 0 0 chrX 141746569 141746611 -24903685 + (ATG)n Simple_repeat Simple_repeat 2 43 0 3 1666 1104 57 0 0 chrX 141747114 141747254 -24903042 + B1_Mm SINE Alu 8 147 0 3 1666 378 0 0 0 chrX 141747258 141747300 -24902996 + (GA)n Simple_repeat Simple_repeat 2 43 0 3 1666 344 40 20 0 chrX 141747997 141748047 -24902249 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1666 201 143 46 31 chrX 141748172 141748237 -24902059 + (TTAAA)n Simple_repeat Simple_repeat 1 66 0 3 1666 291 330 9 18 chrX 141748345 141748459 -24901837 + MIR SINE MIR 50 162 -100 3 1666 649 237 30 55 chrX 141748460 141748605 -24901691 + B3 SINE B2 1 139 -77 3 1666 324 0 0 0 chrX 141748605 141748641 -24901655 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1666 649 237 30 55 chrX 141748641 141748660 -24901636 + B3 SINE B2 140 161 -55 3 1666 536 312 95 7 chrX 141748717 141749011 -24901285 - Lx8 LINE L1 -6 7467 7148 3 1666 33940 43 0 3 chrX 141749273 141754483 -24895813 + L1Md_T LINE L1 298 5589 -297 3 1666 8557 29 0 0 chrX 141754483 141755479 -24894817 + L1Md_T LINE L1 5590 6585 0 3 1666 25 31 0 0 chrX 141755616 141755648 -24894648 + AT_rich Low_complexity Low_complexity 1 32 0 3 1666 693 211 45 0 chrX 141756155 141756288 -24894008 - B1_Mur4 SINE Alu -11 139 1 3 1666 2304 101 3 6 chrX 141756380 141756719 -24893577 + L1_Mus4 LINE L1 6297 6634 -2 3 1666 667 294 108 14 chrX 141757078 141757357 -24892939 - MER2 DNA MER2_type -5 340 36 3 1666 327 146 0 0 chrX 141757539 141757594 -24892702 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1666 519 279 63 31 chrX 141757597 141757852 -24892444 - Lx9 LINE L1 -127 7517 7255 3 1666 308 352 135 39 chrX 141757909 141758190 -24892106 + L2 LINE L2 2704 3011 -408 3 1666 2247 67 7 7 chrX 141758393 141758695 -24891601 + L1_Mus2 LINE L1 6265 6566 0 3 1666 450 0 0 0 chrX 141758943 141758993 -24891303 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1666 212 269 62 25 chrX 141758998 141759078 -24891218 - L2a LINE L2 -91 3335 3253 3 1666 440 316 13 25 chrX 141759128 141759287 -24891009 - B4A SINE B4 -3 289 133 3 1666 4761 125 18 20 chrX 141759287 141760047 -24890249 + Lx4A LINE L1 6299 7057 -1 3 1666 24 0 0 0 chrX 141760047 141760071 -24890225 + AT_rich Low_complexity Low_complexity 1 24 0 3 1666 311 65 22 0 chrX 141761667 141761713 -24888583 + (GA)n Simple_repeat Simple_repeat 1 47 0 3 1666 1059 279 99 31 chrX 141761967 141762322 -24887974 + MTEa LTR MaLR 1 379 0 3 1666 189 0 0 0 chrX 141762797 141762818 -24887478 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 3 1666 366 340 34 57 chrX 141763280 141763489 -24886807 + L3b LINE CR1 181 384 -98 3 1666 292 234 154 15 chrX 141763701 141763831 -24886465 + B1F SINE Alu 2 149 0 3 1666 228 65 0 0 chrX 141763863 141763894 -24886402 + L1_Mus2 LINE L1 6511 6541 -25 3 1666 531 66 0 0 chrX 141763894 141763970 -24886326 + (GGAA)n Simple_repeat Simple_repeat 3 78 0 3 1666 25 51 0 0 chrX 141764117 141764156 -24886140 + AT_rich Low_complexity Low_complexity 1 39 0 3 1666 257 276 158 38 chrX 141764486 141764644 -24885652 + MIR SINE MIR 86 262 0 3 1666 5250 78 1 13 chrX 141765138 141765848 -24884448 + L1Md_F2 LINE L1 5880 6581 -1 3 1666 29 47 0 0 chrX 141766029 141766072 -24884224 + AT_rich Low_complexity Low_complexity 1 43 0 3 1666 720 199 70 28 chrX 141766091 141766341 -24883955 + L1MA4A LINE L1 5637 5924 -379 3 1666 578 120 0 11 chrX 141766579 141766594 -24883702 - B2_Mm1t SINE B2 -21 172 158 3 1666 198 0 0 0 chrX 141766594 141766616 -24883680 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 3 1666 578 120 0 11 chrX 141766616 141766693 -24883603 - B2_Mm1t SINE B2 -36 157 82 3 1666 224 111 22 0 chrX 141766793 141766838 -24883458 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 3 1666 646 241 23 0 chrX 141767026 141767159 -24883137 + B1_Mur1 SINE Alu 8 143 -6 3 1666 312 229 0 24 chrX 141767176 141767228 -24883068 + polypurine Low_complexity Low_complexity 6 54 0 3 1666 3293 33 8 2 chrX 141767228 141767622 -24882674 - MTA_Mm LTR MaLR 0 396 1 3 1666 312 229 0 24 chrX 141767622 141767694 -24882602 + GA-rich Low_complexity Low_complexity 55 126 0 3 1666 2979 68 13 2 chrX 141767711 141768107 -24882189 + MTB LTR MaLR 1 400 0 3 1666 1298 182 0 0 chrX 141768700 141768914 -24881382 - 7SLRNA srpRNA srpRNA -99 215 2 3 1666 406 217 90 80 chrX 141769595 141769695 -24880601 + RSINE1 SINE B4 29 129 -36 3 1666 557 210 56 65 chrX 141769952 141770166 -24880130 + L1MA6 LINE L1 6039 6250 -50 3 1666 404 139 13 0 chrX 141771224 141771303 -24878993 + (TCTA)n Simple_repeat Simple_repeat 4 83 0 3 1666 441 0 0 0 chrX 141771861 141771910 -24878386 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1666 1212 275 85 33 chrX 141771926 141772290 -24878006 - Lx8 LINE L1 -1552 5921 5527 3 1666 216 0 0 0 chrX 141772290 141772314 -24877982 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 1666 1212 273 89 32 chrX 141772314 141772704 -24877592 - Lx8 LINE L1 -321 5526 5093 3 1666 760 172 23 0 chrX 141773265 141773393 -24876903 + B1_Mur3 SINE Alu 5 135 -14 3 1666 334 0 21 21 chrX 141776408 141776455 -24873841 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1666 203 245 19 19 chrX 141776918 141776972 -24873324 + L2a LINE L2 3368 3421 -5 3 1666 192 361 65 60 chrX 141776986 141777154 -24873142 - MIR3 SINE MIR -10 198 30 3 1666 230 302 106 23 chrX 141777195 141777327 -24872969 - MIRc SINE MIR -122 146 4 4 1666 265 288 44 26 chrX 141777751 141777865 -24872431 - MIRc SINE MIR -60 208 93 4 1666 229 330 52 31 chrX 141778271 141778368 -24871928 + B1F1 SINE Alu 1 99 -50 4 1666 4830 136 35 1 chrX 141778647 141779396 -24870900 + Lx4A LINE L1 6284 7057 -1 4 1666 24 0 0 0 chrX 141779396 141779420 -24870876 + AT_rich Low_complexity Low_complexity 1 24 0 4 1666 257 298 80 106 chrX 141780200 141780474 -24869822 + RMER17D LTR ERVK 355 621 -268 4 1666 201 281 145 12 chrX 141780945 141781028 -24869268 + MIR SINE MIR 50 143 -65 4 1666 1251 106 16 31 chrX 141781468 141781662 -24868634 + B2_Mm2 SINE B2 1 191 -4 4 1666 717 85 0 0 chrX 141782171 141782277 -24868019 + (TC)n Simple_repeat Simple_repeat 1 106 0 4 1666 360 0 0 0 chrX 141783653 141783693 -24866603 + (TC)n Simple_repeat Simple_repeat 2 41 0 4 1666 297 0 0 0 chrX 141783693 141783725 -24866571 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1666 272 287 23 0 chrX 141783730 141783817 -24866479 + CT-rich Low_complexity Low_complexity 2 90 0 4 1666 495 0 0 0 chrX 141783821 141783876 -24866420 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1666 499 350 12 12 chrX 141784120 141784282 -24866014 + RSINE1 SINE B4 3 164 -1 4 1666 269 340 29 49 chrX 141784341 141784443 -24865853 + B4A SINE B4 81 180 -112 4 1666 472 222 27 27 chrX 141784352 141784463 -24865833 + PB1D10 SINE Alu 7 117 0 4 1666 1019 202 36 14 chrX 141785311 141785532 -24864764 + URR1A DNA MER1_type 1 226 0 4 1666 1728 174 32 12 chrX 141785584 141785941 -24864355 - ORR1B1 LTR MaLR 0 394 20 4 1666 1131 76 7 0 chrX 141786077 141786222 -24864074 - B1_Mus1 SINE Alu 0 148 3 4 1666 22 56 0 0 chrX 141786356 141786392 -24863904 + AT_rich Low_complexity Low_complexity 1 36 0 4 1666 349 306 9 35 chrX 141786459 141786574 -24863722 + PB1D10 SINE Alu 6 117 0 4 1666 851 252 22 22 chrX 141786886 141787109 -24863187 + MER58A DNA MER1_type 2 224 0 4 1666 1845 105 43 95 chrX 141787293 141787640 -24862656 - ORR1A4 LTR MaLR 0 329 1 4 1666 383 404 51 0 chrX 141787982 141788138 -24862158 + B4 SINE B4 1 164 -128 4 1666 288 363 9 0 chrX 141788383 141788496 -24861800 - MTEa LTR MaLR -20 359 246 4 1666 275 227 15 29 chrX 141788733 141788801 -24861495 - B3A SINE B2 -114 84 18 4 1666 515 276 21 50 chrX 141788807 141788948 -24861348 - MTEa LTR MaLR -242 137 1 4 1666 329 315 82 63 chrX 141788967 141789126 -24861170 - MER63A DNA AcHobo -13 197 36 4 1666 4776 62 11 2 chrX 141789156 141789785 -24860511 - Lx3_Mus LINE L1 0 7009 6375 4 1666 4328 77 61 12 chrX 141789785 141790445 -24859851 + Lx3_Mus LINE L1 5685 6376 -633 4 1666 28 0 0 0 chrX 141790945 141790973 -24859323 + AT_rich Low_complexity Low_complexity 1 28 0 4 1666 449 324 80 27 chrX 141791171 141791396 -24858900 + MLT1A1 LTR MaLR 169 405 -3 4 1666 189 0 0 0 chrX 141791724 141791745 -24858551 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1666 542 323 58 6 chrX 141791818 141791974 -24858322 + B4A SINE B4 1 164 -128 4 1666 348 328 85 17 chrX 141792107 141792225 -24858071 + ORR1E-int LTR MaLR 787 912 -668 4 1666 1991 138 3 70 chrX 141792213 141792555 -24857741 - ORR1A2 LTR MaLR -8 319 1 4 1666 970 321 123 21 chrX 141792555 141793065 -24857231 + ORR1E-int LTR MaLR 838 1504 -76 4 1666 928 169 0 0 chrX 141793065 141793207 -24857089 + B1_Mur3 SINE Alu 1 142 -7 4 1666 1029 284 23 76 chrX 141793256 141793620 -24856676 + ORR1E LTR MaLR 6 384 0 4 1666 1203 110 3 0 chrX 141794957 141795246 -24855050 + (GGAA)n Simple_repeat Simple_repeat 1 289 0 4 1666 222 62 0 0 chrX 141795589 141795621 -24854675 + (TTA)n Simple_repeat Simple_repeat 2 33 0 4 1666 1997 176 43 59 chrX 141795853 141796294 -24854002 + RMER10A LTR ERVL 1 434 -8 4 1666 291 221 8 103 chrX 141796320 141796446 -24853850 + Lx7 LINE L1 7565 7678 -18 4 1666 751 309 20 0 chrX 141796895 141797099 -24853197 + ID_B1 SINE B4 5 212 -12 4 1666 749 171 0 15 chrX 141797694 141797825 -24852471 + B1_Mur3 SINE Alu 19 147 -2 4 1666 413 256 43 52 chrX 141798508 141798718 -24851578 + L1M4 LINE L1 5048 5255 -891 4 1666 349 196 54 0 chrX 141798784 141798876 -24851420 + Lx2 LINE L1 6899 6995 -2 4 1666 2407 70 3 3 chrX 141799740 141800056 -24850240 - L1_Mus1 LINE L1 0 6567 6252 4 1666 411 211 10 40 chrX 141800462 141800561 -24849735 - MTC LTR MaLR -313 108 13 4 1666 374 285 36 54 chrX 141800632 141800799 -24849497 - L1MB1 LINE L1 -131 6037 5874 4 1666 264 248 6 199 chrX 141800800 141800971 -24849325 - L1MB1 LINE L1 -506 5665 5528 4 1666 6479 47 15 3 chrX 141801061 141801912 -24848384 + L1_Mus1 LINE L1 5707 6567 0 4 1666 605 294 58 19 chrX 141801943 141802307 -24847989 - L1MB1 LINE L1 -2064 4076 3699 4 1666 507 288 0 15 chrX 141802309 141802510 -24847786 - L1MB1 LINE L1 -2639 3504 3307 4 1666 6083 83 18 1 chrX 141802901 141803732 -24846564 + L1_Mus3 LINE L1 5794 6638 0 4 1666 362 185 23 58 chrX 141803732 141803809 -24846487 + MT2B LTR ERVL 191 264 -337 4 1666 808 64 9 0 chrX 141803733 141803842 -24846454 + B1_Mus2 SINE Alu 38 147 0 4 1666 1453 276 86 3 chrX 141804109 141804494 -24845802 - MTD LTR MaLR -2 417 1 4 1666 195 100 0 0 chrX 141806058 141806088 -24844208 + (TTTCC)n Simple_repeat Simple_repeat 5 34 0 4 1666 334 297 219 15 chrX 141806324 141806594 -24843702 - Lx8 LINE L1 -3 7470 7146 4 1666 595 315 10 64 chrX 141807061 141807356 -24842940 + Lx7 LINE L1 7034 7312 -384 4 1666 300 111 0 0 chrX 141807758 141807803 -24842493 + (CAT)n Simple_repeat Simple_repeat 1 45 0 4 1666 372 22 0 0 chrX 141808102 141808147 -24842149 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1666 321 345 22 11 chrX 141808432 141808523 -24841773 - RSINE1 SINE B4 -18 147 56 4 1666 257 51 26 0 chrX 141808571 141808610 -24841686 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 4 1666 405 261 58 50 chrX 141808842 141808963 -24841333 - RSINE1 SINE B4 -40 125 4 4 1666 1639 151 63 196 chrX 141809876 141810371 -24839925 - RLTR23 LTR ERV1 -1 429 1 4 1666 537 293 6 0 chrX 141810394 141810568 -24839728 + L1MA4 LINE L1 5751 5925 -375 4 1666 202 329 0 0 chrX 141810700 141810776 -24839520 + A-rich Low_complexity Low_complexity 4 79 0 4 1666 5579 76 13 3 chrX 141811850 141812603 -24837693 + Lx3_Mus LINE L1 6249 7009 0 4 1666 188 214 34 51 chrX 141812825 141812884 -24837412 - L2 LINE L2 -866 2553 2496 4 1666 2361 219 93 88 chrX 141813001 141813881 -24836415 - Lx7 LINE L1 -1 7695 6811 4 1666 1305 108 5 0 chrX 141813904 141814090 -24836206 + B2_Mm1a SINE B2 1 187 -6 4 1666 22 70 0 0 chrX 141814126 141814169 -24836127 + AT_rich Low_complexity Low_complexity 1 43 0 4 1666 329 303 18 18 chrX 141814225 141814336 -24835960 - MER33 DNA MER1_type -212 112 2 4 1666 1471 249 78 2 chrX 141814505 141814915 -24835381 - Lx9 LINE L1 -891 6753 6313 4 1666 2206 111 6 0 chrX 141814923 141815238 -24835058 + ORR1A2 LTR MaLR 3 319 -8 4 1666 1348 234 11 30 chrX 141815356 141815876 -24834420 - Lx9 LINE L1 -1593 6051 5508 4 1666 2706 79 76 8 chrX 141815975 141816369 -24833927 - BGLII LTR ERVK 0 421 1 4 1666 3206 211 27 40 chrX 141816371 141817300 -24832996 - RMER3D-int LTR ERVK -1 2841 1925 4 1666 884 194 56 125 chrX 141817301 141817620 -24832676 - RMER3D-int LTR ERVK -1148 1694 1398 4 1666 254 57 0 0 chrX 141817620 141817655 -24832641 - L1_Mus3 LINE L1 -467 6171 6137 4 1666 2825 130 22 2 chrX 141817655 141818103 -24832193 + L1_Mus3 LINE L1 6176 6632 -6 4 1666 1056 193 139 21 chrX 141818347 141818853 -24831443 - RMER3D-int LTR ERVK -1459 1383 671 4 1666 397 243 0 22 chrX 141818948 141819087 -24831209 - RMER3D-int LTR ERVK -1993 849 714 4 208 489 148 0 11 chrX 141819853 141819942 -24830354 - L1_Mm LINE L1 -276 5607 5520 4 1667 956 80 71 21 chrX 141819982 141820123 -24830173 - B1_Mus1 SINE Alu 0 148 1 4 1667 425 60 0 43 chrX 141820146 141820216 -24830080 + (GA)n Simple_repeat Simple_repeat 2 68 0 4 1667 392 321 7 41 chrX 141820342 141820488 -24829808 + RSINE1 SINE B4 3 143 -22 4 1667 334 237 109 20 chrX 141821255 141821457 -24828839 + L1MC5 LINE L1 7299 7518 -443 4 1667 297 0 0 0 chrX 141821641 141821674 -24828622 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1667 213 348 43 14 chrX 141821675 141821745 -24828551 + B4 SINE B4 43 114 -178 4 1667 257 318 12 0 chrX 141821822 141821907 -24828389 + RSINE1 SINE B4 78 163 -2 4 1667 445 325 68 0 chrX 141822386 141822503 -24827793 + ID_B1 SINE B4 84 208 -16 4 1667 315 308 30 111 chrX 141822503 141822520 -24827776 + PB1 SINE Alu 3 125 -2 4 1667 605 274 96 0 chrX 141822541 141822687 -24827609 + RSINE1 SINE B4 2 161 -4 4 1667 38 0 0 0 chrX 141822739 141822777 -24827519 + AT_rich Low_complexity Low_complexity 1 38 0 4 1667 226 308 244 37 chrX 141823277 141823412 -24826884 + RSINE1 SINE B4 3 165 0 4 1667 25 75 0 0 chrX 141823424 141823477 -24826819 + AT_rich Low_complexity Low_complexity 1 53 0 4 1667 4807 85 16 7 chrX 141823626 141824375 -24825921 - L1_Mur1 LINE L1 -1996 3890 3135 4 1667 2094 79 28 3 chrX 141824375 141824666 -24825630 + Lx3_Mus LINE L1 6712 7009 0 4 1667 25 65 0 0 chrX 141824666 141824712 -24825584 + AT_rich Low_complexity Low_complexity 1 46 0 4 1667 1612 194 20 78 chrX 141824727 141825135 -24825161 - ORR1C2 LTR MaLR 0 384 1 4 1667 612 264 113 4 chrX 141825185 141825386 -24824910 - MTD LTR MaLR 0 419 168 4 1667 2384 30 0 0 chrX 141825389 141825690 -24824606 - L1Md_F2 LINE L1 -623 5260 4960 4 1667 2939 9 0 0 chrX 141825688 141826035 -24824261 + L1Md_F2 LINE L1 5239 5585 -298 4 1667 7988 46 2 12 chrX 141826036 141827040 -24823256 + L1Md_F2 LINE L1 5587 6580 -2 4 1667 689 270 17 11 chrX 141827040 141827216 -24823080 - MTD LTR MaLR -225 194 18 4 1667 427 225 0 11 chrX 141827535 141827625 -24822671 + B3 SINE B2 1 89 -127 4 1667 384 257 48 41 chrX 141827624 141827770 -24822526 + CYRA11_Mm Unknown Y-chromosome 161 307 -310 4 1667 778 143 17 115 chrX 141827646 141827820 -24822476 - URR1A DNA MER1_type -12 214 58 4 1667 1016 137 44 0 chrX 141827823 141828006 -24822290 - B2_Mm2 SINE B2 -3 192 2 4 1667 548 53 13 0 chrX 141828268 141828344 -24821952 + (TTATA)n Simple_repeat Simple_repeat 4 80 0 4 1667 11814 65 1 0 chrX 141828344 141829948 -24820348 - L1_Mm LINE L1 -544 5339 3735 4 1667 505 239 28 82 chrX 141829999 141830181 -24820115 - MT2A LTR ERVL -295 238 67 4 1667 450 306 27 20 chrX 141830111 141830258 -24820038 - MTD LTR MaLR -254 165 18 5 1667 188 349 0 16 chrX 141831178 141831242 -24819054 - MIRm SINE MIR -3 273 211 5 1667 282 371 87 65 chrX 141831189 141831582 -24818714 - L2c LINE L2 -15 3372 2968 5 1667 7374 53 8 6 chrX 141831730 141832702 -24817594 - L1Md_F2 LINE L1 -12 6570 5597 5 1667 699 12 0 0 chrX 141832843 141832923 -24817373 + (TC)n Simple_repeat Simple_repeat 1 80 0 5 1667 270 0 0 0 chrX 141832923 141832952 -24817344 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 1667 224 190 48 79 chrX 141833027 141833090 -24817206 - B1_Mur4 SINE Alu -84 66 6 5 1667 213 108 0 0 chrX 141833148 141833185 -24817111 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 5 1667 348 127 0 0 chrX 141833574 141833629 -24816667 + (GA)n Simple_repeat Simple_repeat 1 55 0 5 1667 504 0 0 0 chrX 141834067 141834123 -24816173 + (GA)n Simple_repeat Simple_repeat 2 57 0 5 1667 5624 62 33 9 chrX 141834473 141835171 -24815125 + L1Md_F2 LINE L1 5868 6582 0 5 1667 21 36 0 0 chrX 141835308 141835336 -24814960 + AT_rich Low_complexity Low_complexity 1 28 0 5 1667 318 227 0 40 chrX 141837154 141837278 -24813018 + GA-rich Low_complexity Low_complexity 6 124 0 5 1667 797 186 56 28 chrX 141837585 141837729 -24812567 + B1_Mur3 SINE Alu 2 149 0 5 1667 6181 181 29 15 chrX 141837784 141838981 -24811315 - Lx2B LINE L1 -4 6996 5783 5 1667 390 94 0 0 chrX 141838990 141839054 -24811242 - L1_Mus3 LINE L1 0 6638 6575 5 1667 212 350 114 57 chrX 141839258 141839733 -24810563 + L2 LINE L2 2367 2868 -551 5 1667 499 99 12 0 chrX 141839959 141840040 -24810256 - URR1B DNA MER1_type -66 159 78 5 1667 659 270 7 33 chrX 141840262 141840415 -24809881 - B3A SINE B2 -48 150 2 5 1667 256 355 84 19 chrX 141841148 141841303 -24808993 - MIRb SINE MIR -46 222 58 5 1667 283 299 101 20 chrX 141841823 141841922 -24808374 - MER2 DNA MER2_type -6 339 233 5 1667 707 282 21 26 chrX 141841917 141842110 -24808186 - MER2 DNA MER2_type -67 278 87 5 1667 1231 179 18 5 chrX 141842120 141842339 -24807957 - URR1B DNA MER1_type -3 222 1 5 1667 1380 82 0 26 chrX 141842680 141842869 -24807427 + B2_Mm2 SINE B2 2 185 -10 5 1667 202 186 47 0 chrX 141843178 141843221 -24807075 + (GGATG)n Simple_repeat Simple_repeat 3 47 0 5 1667 291 366 19 62 chrX 141844219 141844570 -24805726 - Tigger5 DNA MER2_type -2137 269 1 5 1667 3055 79 70 0 chrX 141844816 141845219 -24805077 + L1_Mus1 LINE L1 6137 6567 0 5 1667 236 289 0 0 chrX 141845710 141845755 -24804541 + B4A SINE B4 32 76 -216 5 1667 243 175 0 0 chrX 141845808 141845865 -24804431 + GA-rich Low_complexity Low_complexity 1 57 0 5 1667 195 42 0 0 chrX 141845862 141845886 -24804410 + (CAGAGA)n Simple_repeat Simple_repeat 3 26 0 5 1667 199 0 65 0 chrX 141846489 141846520 -24803776 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 5 1667 486 348 41 122 chrX 141846639 141846860 -24803436 + B4 SINE B4 3 213 -79 5 1667 2649 97 0 3 chrX 141846860 141847211 -24803085 - L1_Mus4 LINE L1 -1 6635 6286 5 1667 486 348 41 122 chrX 141847211 141847284 -24803012 + B4 SINE B4 214 273 -19 5 1667 416 317 28 0 chrX 141847528 141847670 -24802626 + MIR SINE MIR 46 191 -71 5 1667 369 0 0 0 chrX 141847958 141847999 -24802297 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1667 432 0 0 0 chrX 141847999 141848046 -24802250 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 1667 575 165 50 50 chrX 141848477 141848617 -24801679 + B1_Mur3 SINE Alu 2 141 -8 5 1667 214 309 46 64 chrX 141848617 141848640 -24801656 + B4A SINE B4 123 246 -46 5 1667 277 179 12 25 chrX 141848747 141848827 -24801469 + GA-rich Low_complexity Low_complexity 1 79 0 5 1667 327 379 85 36 chrX 141849438 141849767 -24800529 + L2b LINE L2 2738 3082 -337 5 1667 258 284 10 78 chrX 141849802 141849905 -24800391 + MLT1E2 LTR MaLR 61 156 -471 5 1667 1549 139 9 0 chrX 141849920 141850143 -24800153 + URR1A DNA MER1_type 2 226 0 5 1667 335 333 21 145 chrX 141850264 141850506 -24799790 + MLT1E2 LTR MaLR 416 627 0 5 1667 193 329 53 0 chrX 141850511 141850587 -24799709 + L2b LINE L2 3076 3155 -220 5 1667 205 154 26 0 chrX 141850914 141850953 -24799343 + L2a LINE L2 3382 3421 -5 5 1667 182 302 111 19 chrX 141850960 141851068 -24799228 - MIR SINE MIR -14 248 131 5 1667 1591 244 58 12 chrX 141851212 141851626 -24798670 + Lx5 LINE L1 6610 7042 -8 5 1667 508 326 80 40 chrX 141852748 141852997 -24797299 - B4A SINE B4 0 292 34 5 1667 352 335 71 27 chrX 141853128 141853352 -24796944 + MIR SINE MIR 4 237 -25 5 1667 402 322 0 0 chrX 141854385 141854500 -24795796 - PB1D10 SINE Alu -2 115 1 5 1667 188 200 0 18 chrX 141854659 141854715 -24795581 + CT-rich Low_complexity Low_complexity 2 56 0 5 1667 2909 55 8 8 chrX 141854779 141855167 -24795129 + RLTR10 LTR ERVK 1 388 -2 5 1667 1821 176 83 11 chrX 141855169 141855530 -24794766 + ORR1B1 LTR MaLR 8 394 0 5 1667 1558 151 67 91 chrX 141855675 141856017 -24794279 - ORR1B1 LTR MaLR -14 380 47 5 1667 265 381 45 13 chrX 141856224 141856381 -24793915 + MIR3 SINE MIR 17 178 -30 5 1667 366 311 0 9 chrX 141856510 141856617 -24793679 - Tigger5 DNA MER2_type -10 2396 2291 5 1667 372 300 11 11 chrX 141856613 141856704 -24793592 - Tigger5 DNA MER2_type -2164 242 152 5 1667 351 65 0 0 chrX 141856730 141856776 -24793520 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1667 264 242 32 0 chrX 141856791 141856853 -24793443 - Tigger5 DNA MER2_type -2342 64 1 5 1667 1282 165 29 4 chrX 141857159 141857402 -24792894 - Lx LINE L1 0 6654 6406 5 1667 1449 45 0 16 chrX 141857627 141857809 -24792487 - L1Md_F2 LINE L1 -12 6570 6392 5 1667 356 237 24 40 chrX 141857821 141857946 -24792350 + B3A SINE B2 2 128 -70 5 1667 1537 143 134 13 chrX 141857946 141858251 -24792045 + RMER4A LTR ERVK 1 342 -124 5 1667 684 0 0 0 chrX 141858266 141858342 -24791954 + (TTTC)n Simple_repeat Simple_repeat 1 76 0 5 1667 746 293 5 37 chrX 141858532 141858720 -24791576 + B3A SINE B2 1 182 -34 5 1667 887 248 128 24 chrX 141858731 141859028 -24791268 + Lx7 LINE L1 7079 7406 -290 5 1667 288 0 0 0 chrX 141859130 141859162 -24791134 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 1667 22 0 0 0 chrX 141859272 141859294 -24791002 + AT_rich Low_complexity Low_complexity 1 22 0 5 1667 448 300 75 113 chrX 141859456 141859738 -24790558 - MER46C DNA MER2_type -35 303 33 5 1667 3524 48 0 0 chrX 141859948 141860344 -24789952 - MTA_Mm LTR MaLR 0 396 1 5 1667 22 70 0 0 chrX 141860591 141860634 -24789662 + AT_rich Low_complexity Low_complexity 1 43 0 5 1667 7118 193 52 35 chrX 141860634 141862070 -24788226 - Lx5 LINE L1 -3 7047 5588 5 1667 388 326 132 0 chrX 141862731 141862860 -24787436 + RSINE1 SINE B4 14 159 -6 5 1667 373 277 39 51 chrX 141862922 141863078 -24787218 + Cheshire DNA MER1_type 108 261 -2159 5 1667 1296 178 23 0 chrX 141863132 141863351 -24786945 - URR1B DNA MER1_type 0 225 2 5 1667 212 386 74 52 chrX 141863464 141864136 -24786160 + L2 LINE L2 2168 2854 -565 5 1667 1814 156 91 15 chrX 141864275 141864614 -24785682 - RMER19A LTR ERVK -372 365 1 5 1667 267 133 0 0 chrX 141864658 141864703 -24785593 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1667 306 0 0 0 chrX 141864703 141864737 -24785559 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 1667 22 0 0 0 chrX 141864866 141864888 -24785408 + AT_rich Low_complexity Low_complexity 1 22 0 5 1667 264 343 35 56 chrX 141865137 141865279 -24785017 + MER5B DNA MER1_type 7 145 -33 5 1667 824 268 82 0 chrX 141866069 141866263 -24784033 - MER70A LTR ERVL -3 469 260 5 1667 4979 36 2 5 chrX 141866647 141867208 -24783088 + L1Md_F2 LINE L1 6009 6567 -15 5 1667 241 237 0 0 chrX 141868210 141868269 -24782027 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1667 958 154 15 0 chrX 141869587 141869723 -24780573 + B1_Mur3 SINE Alu 1 138 -11 5 1667 287 311 14 0 chrX 141870369 141870443 -24779853 + L1M7 LINE L1 18 92 -6126 5 1667 1169 256 91 15 chrX 141870488 141870817 -24779479 - ORR1E LTR MaLR -5 354 1 5 1667 683 47 139 19 chrX 141870855 141870963 -24779333 + L1Md_F2 LINE L1 6459 6579 -3 5 1667 2760 205 33 13 chrX 141871113 141871662 -24778634 + Lx5 LINE L1 6491 7050 0 5 1667 22 0 0 0 chrX 141872188 141872210 -24778086 + AT_rich Low_complexity Low_complexity 1 22 0 5 1667 1053 252 26 4 chrX 141872285 141872512 -24777784 + Lx6 LINE L1 6960 7191 -269 5 1667 8196 33 1 1 chrX 141872510 141873964 -24776332 - L1Md_T LINE L1 -1 6581 5129 5 1667 399 209 81 0 chrX 141873960 141874046 -24776250 + Lx6 LINE L1 7176 7268 -192 5 1667 1146 129 6 6 chrX 141874052 141874231 -24776065 - B2_Mm2 SINE B2 -14 181 3 5 1667 548 212 111 13 chrX 141874231 141874384 -24775912 + Lx6 LINE L1 7267 7434 -26 5 1667 385 365 54 39 chrX 141874668 141874873 -24775423 + MLT2C1 LTR ERVL 147 354 -43 5 1667 229 224 119 0 chrX 141874939 141875006 -24775290 + B4 SINE B4 7 81 -211 5 1667 440 261 57 0 chrX 141874946 141875104 -24775192 + B3 SINE B2 22 216 0 5 1667 426 274 92 43 chrX 141875357 141875498 -24774798 + RSINE1 SINE B4 3 150 -15 5 1667 348 133 0 0 chrX 141875498 141875558 -24774738 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 1667 626 331 100 38 chrX 141875592 141876013 -24774283 + Arthur1B DNA Tip100 540 965 -260 5 1667 1130 263 137 19 chrX 141876013 141876385 -24773911 + MTD LTR MaLR 4 419 0 5 1667 626 331 100 38 chrX 141876385 141876406 -24773890 + Arthur1B DNA Tip100 966 985 -240 5 1667 279 0 0 0 chrX 141876406 141876437 -24773859 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1667 626 331 100 38 chrX 141876437 141876574 -24773722 + Arthur1B DNA Tip100 986 1154 -71 5 1667 569 308 91 33 chrX 141876625 141876900 -24773396 - B4A SINE B4 0 292 2 5 1667 348 24 0 0 chrX 141877424 141877465 -24772831 + (T)n Simple_repeat Simple_repeat 1 41 0 5 1667 183 42 0 0 chrX 141877494 141877518 -24772778 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 1667 269 282 28 0 chrX 141877798 141877869 -24772427 - MIR3 SINE MIR -3 205 133 5 1667 242 149 21 0 chrX 141878439 141878486 -24771810 + L1MA4A LINE L1 6091 6138 -165 6 1667 834 109 0 0 chrX 141879034 141879162 -24771134 + (TA)n Simple_repeat Simple_repeat 2 129 0 6 1667 186 288 0 33 chrX 141879162 141879223 -24771073 - MIRc SINE MIR -192 76 18 6 1667 290 261 170 24 chrX 141880438 141880603 -24769693 - Lx8 LINE L1 0 7473 7285 6 1667 248 414 29 29 chrX 141881123 141881260 -24769036 + MamSINE1 SINE tRNA 119 255 -35 6 1667 321 47 0 0 chrX 141882516 141882559 -24767737 + (CAGA)n Simple_repeat Simple_repeat 4 46 0 6 1667 285 246 0 0 chrX 141882946 141883007 -24767289 + MIRm SINE MIR 86 146 -130 6 1667 414 259 0 23 chrX 141885220 141885495 -24764801 + (CAG)n Simple_repeat Simple_repeat 1 268 0 6 1667 261 151 0 0 chrX 141885515 141885568 -24764728 + (CAG)n Simple_repeat Simple_repeat 3 55 0 6 1667 253 311 0 0 chrX 141885590 141885664 -24764632 + (CAG)n Simple_repeat Simple_repeat 3 76 0 6 1667 631 245 29 0 chrX 141890011 141890150 -24760146 + B1F1 SINE Alu 7 149 0 6 1667 335 298 26 9 chrX 141891589 141891704 -24758592 - PB1D10 SINE Alu 0 117 1 6 1667 655 281 30 26 chrX 141892042 141892309 -24757987 + L1ME1 LINE L1 5711 5978 -201 6 1667 239 258 0 29 chrX 141892407 141892475 -24757821 + CT-rich Low_complexity Low_complexity 2 67 0 6 1667 561 115 0 0 chrX 141894803 141894890 -24755406 + (TCTA)n Simple_repeat Simple_repeat 3 89 0 6 1667 215 309 0 0 chrX 141895051 141895093 -24755203 - ID4_ SINE ID -23 60 19 6 1667 430 263 48 68 chrX 141896074 141896221 -24754075 + RMER15 LTR ERVL 345 488 -87 6 1667 378 0 0 0 chrX 141898026 141898068 -24752228 + (GGAA)n Simple_repeat Simple_repeat 2 43 0 6 1667 405 0 0 0 chrX 141898068 141898113 -24752183 + (GA)n Simple_repeat Simple_repeat 1 45 0 6 1667 557 101 22 0 chrX 141898114 141898203 -24752093 + (GAAAA)n Simple_repeat Simple_repeat 4 94 0 6 1667 269 307 89 0 chrX 141899035 141899136 -24751160 - PB1D10 SINE Alu -6 111 2 6 1667 435 52 0 0 chrX 141899462 141899520 -24750776 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 1667 414 0 0 0 chrX 141900117 141900163 -24750133 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 1667 227 197 6 0 chrX 141900731 141900782 -24749514 - ID4 SINE ID -20 63 11 6 1667 678 85 0 0 chrX 141901297 141901391 -24748905 + (GGA)n Simple_repeat Simple_repeat 3 96 0 6 1667 1448 66 0 0 chrX 141901547 141901729 -24748567 + L1_Mus1 LINE L1 6382 6563 -4 6 1667 230 243 57 0 chrX 141902000 141902070 -24748226 - MADE2 DNA Mariner -6 74 1 6 1667 292 281 56 29 chrX 141902070 141902182 -24748114 - MIRm SINE MIR -110 158 39 6 1667 526 224 135 8 chrX 141904007 141904133 -24746163 - B1_Mur2 SINE Alu -6 143 2 6 1667 245 277 24 12 chrX 141904666 141904750 -24745546 - B1F2 SINE Alu -3 146 62 6 1667 197 221 0 14 chrX 141906380 141906449 -24743847 + (TATATG)n Simple_repeat Simple_repeat 2 69 0 6 1667 1756 281 52 109 chrX 141906949 141908025 -24742271 + L1MCa LINE L1 2 1016 -5492 6 1667 207 231 250 69 chrX 141908541 141908657 -24741639 - MIRb SINE MIR -14 254 118 6 1667 206 118 0 0 chrX 141910433 141910467 -24739829 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1667 362 317 14 27 chrX 141910549 141910695 -24739601 + B1F1 SINE Alu 4 147 -2 6 1667 191 146 24 0 chrX 141911913 141911954 -24738342 + A-rich Low_complexity Low_complexity 2 43 0 6 1667 21 0 0 0 chrX 141913679 141913700 -24736596 + AT_rich Low_complexity Low_complexity 1 21 0 6 1667 363 89 0 0 chrX 141913770 141913826 -24736470 + (CA)n Simple_repeat Simple_repeat 2 57 0 6 1667 335 251 67 18 chrX 141915750 141915899 -24734397 + B3 SINE B2 15 173 -22 6 1667 317 236 168 9 chrX 141915940 141916047 -24734249 + B1_Mur2 SINE Alu 3 126 -23 6 1667 212 236 0 63 chrX 141917458 141917477 -24732819 + A-rich Low_complexity Low_complexity 4 22 0 6 1667 1245 34 0 0 chrX 141917477 141917624 -24732672 + B1_Mus2 SINE Alu 1 147 0 6 1667 212 236 0 63 chrX 141917624 141917699 -24732597 + A-rich Low_complexity Low_complexity 23 92 0 6 1667 222 150 0 0 chrX 141918837 141918877 -24731419 + (TC)n Simple_repeat Simple_repeat 1 40 0 6 1667 181 30 29 57 chrX 141919301 141919336 -24730960 + (CAAAAA)n Simple_repeat Simple_repeat 1 34 0 6 1667 225 0 0 0 chrX 141920056 141920081 -24730215 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1667 423 0 0 0 chrX 141920687 141920734 -24729562 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1667 336 293 0 0 chrX 141923748 141923830 -24726466 - ID4_ SINE ID 0 83 2 6 1667 198 0 0 0 chrX 141923843 141923865 -24726431 + (TC)n Simple_repeat Simple_repeat 1 22 0 6 1667 239 292 0 0 chrX 141924288 141924353 -24725943 + (CA)n Simple_repeat Simple_repeat 1 65 0 6 1667 183 228 43 122 chrX 141925049 141925164 -24725132 - L2a LINE L2 -16 3410 3305 6 1667 683 264 35 25 chrX 141927071 141927273 -24723023 + B3 SINE B2 2 205 -11 6 1667 1569 35 0 10 chrX 141928107 141928308 -24721988 + L1Md_F3 LINE L1 6374 6572 -12 6 1667 216 0 0 0 chrX 141928360 141928384 -24721912 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1667 480 279 56 21 chrX 141928415 141928558 -24721738 - RSINE1 SINE B4 -5 160 13 6 1667 1115 82 7 0 chrX 141928901 141929047 -24721249 - B1_Mus2 SINE Alu 0 147 1 6 1667 583 226 37 8 chrX 141929193 141929327 -24720969 - B1F SINE Alu 0 149 12 6 1667 1629 5 0 0 chrX 141929786 141929970 -24720326 - L1Md_A LINE L1 -1 6581 6398 6 1667 196 307 9 114 chrX 141931646 141931760 -24718536 - MIR SINE MIR -77 131 30 6 1667 348 24 0 0 chrX 141931860 141931901 -24718395 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 1667 310 298 40 8 chrX 141934369 141934494 -24715802 - MIRc SINE MIR -107 161 33 6 1667 222 116 0 0 chrX 141934555 141934598 -24715698 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1667 405 0 0 0 chrX 141940115 141940160 -24710136 + (TTTTC)n Simple_repeat Simple_repeat 1 45 0 6 1667 224 321 147 20 chrX 141942735 141942932 -24707364 - L2c LINE L2 -10 3377 3156 6 1667 273 292 55 55 chrX 141943243 141943260 -24707036 + L1MB4 LINE L1 5812 5825 -364 6 1667 1395 68 17 0 chrX 141943260 141943437 -24706859 + B2_Mm2 SINE B2 1 180 -15 6 1667 408 238 52 31 chrX 141943437 141943582 -24706714 + L1MB4 LINE L1 5826 5975 -205 6 1667 277 289 158 30 chrX 141943730 141943894 -24706402 - MER102a DNA MER1_type -85 245 61 6 1667 306 50 0 0 chrX 141944399 141944439 -24705857 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1667 236 77 0 25 chrX 141944883 141944923 -24705373 + (TGGGGG)n Simple_repeat Simple_repeat 5 43 0 6 1667 347 325 78 36 chrX 141945293 141945459 -24704837 + MIRb SINE MIR 22 194 -74 6 1667 329 310 42 33 chrX 141945712 141945832 -24704464 + B4A SINE B4 3 123 -169 6 1667 198 128 0 0 chrX 141945888 141945927 -24704369 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1667 396 286 47 22 chrX 141945927 141946052 -24704244 + B1_Mur1 SINE Alu 1 119 -1 6 1667 191 32 0 61 chrX 141946200 141946210 -24704086 + (TCTA)n Simple_repeat Simple_repeat 4 12 0 6 1667 3102 78 0 2 chrX 141946210 141946607 -24703689 + MTA_Mm LTR MaLR 1 396 0 6 1667 191 32 0 61 chrX 141946607 141946629 -24703667 + (TCTA)n Simple_repeat Simple_repeat 2 23 0 6 1667 185 439 39 0 chrX 141947088 141947218 -24703078 + MIRb SINE MIR 2 136 -132 6 1667 21 0 0 0 chrX 141947334 141947355 -24702941 + AT_rich Low_complexity Low_complexity 1 21 0 6 1667 754 217 130 0 chrX 141947359 141947543 -24702753 - B3 SINE B2 -6 210 3 6 1667 21 36 0 0 chrX 141947927 141947955 -24702341 + AT_rich Low_complexity Low_complexity 1 28 0 6 1667 330 285 16 31 chrX 141948166 141948293 -24702003 - MamRep564 Unknown Unknown -99 258 134 6 1667 231 36 0 0 chrX 141948880 141948908 -24701388 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 6 1667 780 235 64 16 chrX 141949158 141949409 -24700887 + L1MA6 LINE L1 6033 6295 -5 6 1667 309 284 8 49 chrX 141949419 141949541 -24700755 + PB1D10 SINE Alu 1 117 0 6 1667 363 23 0 0 chrX 141949576 141949620 -24700676 + (G)n Simple_repeat Simple_repeat 1 44 0 6 1667 357 356 10 65 chrX 141949625 141949826 -24700470 + MIRc SINE MIR 43 232 -36 6 1667 330 26 0 0 chrX 141950400 141950439 -24699857 + (A)n Simple_repeat Simple_repeat 1 39 0 6 1668 405 0 0 0 chrX 141951795 141951840 -24698456 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1668 213 237 16 48 chrX 141952164 141952226 -24698070 + CT-rich Low_complexity Low_complexity 2 61 0 6 1668 240 312 175 22 chrX 141952376 141952599 -24697697 + MER34 LTR ERV1 212 468 -74 6 1668 554 311 120 0 chrX 141953132 141953315 -24696981 - ID_B1 SINE B4 -14 210 6 6 1668 242 324 14 0 chrX 141953852 141953923 -24696373 + ID4 SINE ID 2 73 -10 6 1668 253 318 111 44 chrX 141954191 141954326 -24695970 - LTR48 LTR ERV1 -643 144 1 6 1668 1102 36 22 0 chrX 141954451 141954588 -24695708 + B2_Mm2 SINE B2 33 172 -23 6 1668 338 317 7 66 chrX 141955377 141955394 -24694902 + ID_B1 SINE B4 79 221 -3 6 1668 467 280 15 22 chrX 141955394 141955529 -24694767 + B1F1 SINE Alu 15 148 -1 6 1668 631 312 115 17 chrX 141955522 141955821 -24694475 + MER44B DNA MER2_type 96 404 -146 6 1668 334 285 138 0 chrX 141955821 141955944 -24694352 - MTEa LTR MaLR 0 379 240 6 1668 253 337 21 42 chrX 141956063 141956159 -24694137 - MTEa LTR MaLR -262 97 4 6 1668 512 292 22 0 chrX 141956160 141956297 -24693999 + MER44B DNA MER2_type 402 541 -9 6 1668 232 333 120 50 chrX 141956384 141956610 -24693686 + MIRc SINE MIR 2 236 -32 6 1668 293 391 72 0 chrX 141956742 141956880 -24693416 + B1F1 SINE Alu 2 149 0 6 1668 329 231 25 13 chrX 141957070 141957149 -24693147 + ID4_ SINE ID 1 80 -3 6 1668 214 267 43 65 chrX 141957297 141957389 -24692907 - B2_Mm2 SINE B2 -104 91 2 6 1668 333 0 0 0 chrX 141957423 141957460 -24692836 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1668 227 309 43 29 chrX 141957878 141957948 -24692348 + MIRm SINE MIR 193 263 -13 7 1668 585 371 52 42 chrX 141957972 141958430 -24691866 - MLT1C LTR MaLR -4 463 1 7 1668 1057 83 0 14 chrX 141958624 141958770 -24691526 + B1_Mus1 SINE Alu 1 144 -4 7 1668 266 110 48 29 chrX 141958798 141958901 -24691395 + A-rich Low_complexity Low_complexity 1 105 0 7 1668 7580 131 36 2 chrX 141959307 141960538 -24689758 + L1_Mur2 LINE L1 4547 5819 -58 7 1668 4514 175 73 21 chrX 141960531 141961452 -24688844 + Lx4B LINE L1 6072 7040 -18 7 1668 330 26 0 0 chrX 141961452 141961491 -24688805 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 7 1668 324 0 0 0 chrX 141961496 141961532 -24688764 + (CATA)n Simple_repeat Simple_repeat 1 36 0 7 1668 444 332 52 47 chrX 141961641 141961979 -24688317 - MLT1D LTR MaLR -139 366 1 7 1668 1010 45 8 0 chrX 141962092 141962224 -24688072 + (TCTA)n Simple_repeat Simple_repeat 4 136 0 7 1668 594 316 0 7 chrX 141962245 141962382 -24687914 - RSINE1 SINE B4 -27 138 3 7 1668 223 322 45 22 chrX 141962492 141962581 -24687715 - MIR SINE MIR -2 260 170 7 1668 281 286 0 14 chrX 141962600 141962671 -24687625 - B1F SINE Alu 0 149 80 7 1668 1183 208 55 29 chrX 141962734 141963006 -24687290 + ORR1B2 LTR MaLR 89 367 0 7 1668 624 178 7 14 chrX 141963095 141963243 -24687053 + (TA)n Simple_repeat Simple_repeat 1 147 0 7 1668 228 122 0 0 chrX 141963248 141963289 -24687007 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1668 645 150 158 0 chrX 141963289 141963422 -24686874 - ORR1B2 LTR MaLR -213 154 1 7 1668 351 0 0 0 chrX 141965393 141965432 -24684864 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1668 411 297 18 0 chrX 141965727 141965838 -24684458 - PB1D10 SINE Alu -3 114 2 7 1668 3549 59 4 7 chrX 141965901 141966364 -24683932 + L1_Mus1 LINE L1 6106 6567 0 7 1668 784 240 87 5 chrX 141966972 141967190 -24683106 - L1MB2 LINE L1 -57 6114 5879 7 1668 254 313 0 100 chrX 141967609 141967719 -24682577 + MT2B LTR ERVL 153 251 -350 7 1668 656 225 49 7 chrX 141967621 141967764 -24682532 + B1_Mur3 SINE Alu 1 149 0 7 1668 369 117 0 0 chrX 141967789 141967849 -24682447 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 7 1668 1015 166 65 19 chrX 141968087 141968302 -24681994 - URR1A DNA MER1_type 0 226 2 7 1668 827 312 101 23 chrX 141968638 141968986 -24681310 - Lx8 LINE L1 -131 7342 6968 7 1668 404 304 78 9 chrX 141969024 141969140 -24681156 - ID_B1 SINE B4 -97 127 4 7 1668 362 361 6 12 chrX 141969478 141969646 -24680650 - RMER15 LTR ERVL 0 575 409 7 1668 4368 37 0 0 chrX 141969682 141970200 -24680096 + L1Md_T LINE L1 6064 6581 -1 7 1668 1796 175 64 26 chrX 141971198 141971544 -24678752 - ORR1B2 LTR MaLR -8 359 1 7 1668 766 164 14 0 chrX 141971837 141971977 -24678319 + URR1B DNA MER1_type 83 224 -1 7 1668 1045 283 67 58 chrX 141972910 141973311 -24676985 - MTE2a LTR MaLR -4 375 1 7 1668 369 0 0 0 chrX 141973324 141973365 -24676931 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 7 1668 321 253 73 10 chrX 141973851 141973947 -24676349 + ORR1E LTR MaLR 246 347 -12 7 1668 205 375 25 44 chrX 141974505 141974664 -24675632 + L2c LINE L2 3194 3349 -38 7 1668 447 68 0 0 chrX 141974844 141974903 -24675393 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 7 1668 212 309 0 29 chrX 141975111 141975181 -24675115 + (CATATA)n Simple_repeat Simple_repeat 4 71 0 7 1668 381 330 62 28 chrX 141977077 141977255 -24673041 + MIRc SINE MIR 80 263 -5 7 1668 728 169 0 13 chrX 141978068 141978218 -24672078 + GA-rich Low_complexity Low_complexity 4 151 0 7 1668 387 0 0 0 chrX 141979185 141979228 -24671068 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1668 324 0 0 0 chrX 141980666 141980702 -24669594 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 1668 252 290 0 0 chrX 141980703 141980772 -24669524 - ID4 SINE ID -14 69 1 7 1668 433 257 19 0 chrX 141980774 141980879 -24669417 + MLT1A LTR MaLR 260 366 -8 7 1668 256 273 12 38 chrX 141980937 141981017 -24669279 + L2a LINE L2 3349 3426 0 7 1668 239 381 58 0 chrX 141981937 141982110 -24668186 + MIR SINE MIR 45 227 -35 7 1668 29 0 0 0 chrX 141982216 141982245 -24668051 + AT_rich Low_complexity Low_complexity 1 29 0 7 1668 698 244 149 35 chrX 141982412 141982770 -24667526 - Lx9 LINE L1 -1674 5970 5540 7 1668 327 287 0 38 chrX 141983020 141983125 -24667171 - PB1D9 SINE Alu -5 115 15 7 1668 457 347 6 51 chrX 141983235 141983393 -24666903 - RSINE1 SINE B4 0 165 15 7 1668 231 282 37 55 chrX 141983579 141983688 -24666608 - MTEb LTR MaLR 0 379 273 7 1668 219 233 0 0 chrX 141986858 141986901 -24663395 + GA-rich Low_complexity Low_complexity 5 47 0 7 1668 433 265 39 19 chrX 141987024 141987128 -24663168 + PB1D7 SINE Alu 13 118 -2 7 1668 2456 98 0 0 chrX 141987139 141987466 -24662830 + ORR1A2 LTR MaLR 1 327 0 7 1668 815 225 0 0 chrX 141987689 141987831 -24662465 - B1_Mur1 SINE Alu -6 143 2 7 1668 21 57 0 0 chrX 141988410 141988445 -24661851 + AT_rich Low_complexity Low_complexity 1 35 0 7 1668 1405 84 5 5 chrX 141989043 141989235 -24661061 - B2_Mm2 SINE B2 -1 194 3 7 1668 528 309 115 67 chrX 141989526 141989828 -24660468 + L1MA7 LINE L1 5557 5908 -383 7 1668 418 314 6 32 chrX 141989828 141989986 -24660310 + RSINE1 SINE B4 4 157 -8 7 1668 528 289 87 40 chrX 141989986 141990242 -24660054 + L1MA7 LINE L1 5909 6143 -28 7 1668 330 87 0 0 chrX 141992398 141992444 -24657852 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1668 216 86 0 0 chrX 141992736 141992771 -24657525 + (T)n Simple_repeat Simple_repeat 1 35 0 7 1668 287 243 13 14 chrX 141994474 141994574 -24655722 - L2c LINE L2 -93 3333 3242 7 1668 11919 60 7 4 chrX 141995154 141996674 -24653622 + L1_Mm LINE L1 4057 5585 -298 7 1668 7762 54 19 3 chrX 141996674 141997654 -24652642 + L1Md_F2 LINE L1 5587 6582 0 7 1668 11919 60 7 4 chrX 141997654 141997677 -24652619 + L1_Mm LINE L1 5586 5605 -278 7 1668 411 324 0 0 chrX 141997790 141997898 -24652398 + PB1D10 SINE Alu 10 117 0 7 1668 23 0 0 0 chrX 141997912 141997935 -24652361 + AT_rich Low_complexity Low_complexity 1 23 0 7 1668 373 288 20 33 chrX 141998135 141998286 -24652010 + L1MCa LINE L1 288 436 -6315 7 1668 737 286 89 68 chrX 141998383 141998966 -24651330 + L1MCa LINE L1 598 1155 -5596 7 1668 4273 92 3 12 chrX 141999024 141999619 -24650677 + Lx LINE L1 5944 6533 -121 7 1668 423 320 58 35 chrX 141999650 141999996 -24650300 + L1MCa LINE L1 1137 1490 -5261 7 1668 377 242 50 0 chrX 142000002 142000122 -24650174 + L1MCa LINE L1 1258 1383 -5125 1 1668 357 24 0 0 chrX 142000151 142000193 -24650103 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1668 307 243 149 0 chrX 142000299 142000406 -24649890 + L1MCa LINE L1 2116 2238 -4270 1 1668 375 286 0 0 chrX 142001136 142001213 -24649083 - ID4_ SINE ID -2 81 5 3 1668 460 252 7 144 chrX 142001288 142001427 -24648869 - B4A SINE B4 -144 148 29 4 1668 196 315 76 59 chrX 142002565 142002683 -24647613 - MIRb SINE MIR -32 236 117 5 1668 1293 75 0 0 chrX 142002922 142003096 -24647200 + (TTCTC)n Simple_repeat Simple_repeat 2 175 0 6 1668 232 170 0 0 chrX 142003119 142003166 -24647130 + A-rich Low_complexity Low_complexity 2 48 0 7 1668 1027 88 0 0 chrX 142003291 142003428 -24646868 + B1_Mus1 SINE Alu 1 137 -11 8 1668 259 354 67 34 chrX 142004019 142004168 -24646128 - MLT1A1 LTR MaLR -185 223 70 9 1668 1874 328 94 33 chrX 142004199 142005019 -24645277 - MLT-int LTR MaLR -5 1730 861 1 1668 331 315 32 77 chrX 142005094 142005249 -24645047 - MLT1A1 LTR MaLR -185 223 76 1 1668 21 36 0 0 chrX 142005493 142005521 -24644775 + AT_rich Low_complexity Low_complexity 1 28 0 1 1668 243 271 0 41 chrX 142005742 142005815 -24644481 + ID_B1 SINE B4 85 154 -70 1 1668 396 0 0 0 chrX 142005840 142005884 -24644412 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1668 872 308 17 24 chrX 142005944 142006240 -24644056 - MLT-int LTR MaLR -1190 545 252 1 1668 395 215 31 31 chrX 142006333 142006429 -24643867 - MLT1A1 LTR MaLR -312 96 1 1 1668 531 276 61 12 chrX 142006659 142006824 -24643472 + MER5A DNA MER1_type 16 188 -1 1 1668 603 235 88 11 chrX 142007482 142007663 -24642633 + B3A SINE B2 4 198 0 1 1668 883 343 113 9 chrX 142007667 142008133 -24642163 + Tigger7 DNA MER2_type 70 550 0 1 1668 321 109 0 0 chrX 142008194 142008249 -24642047 + (CTA)n Simple_repeat Simple_repeat 1 55 0 1 1668 229 293 0 17 chrX 142008391 142008450 -24641846 - B4A SINE B4 -151 141 84 2 1668 217 299 0 0 chrX 142008543 142008620 -24641676 + (TTTA)n Simple_repeat Simple_repeat 2 78 0 2 1668 448 370 68 0 chrX 142008624 142008770 -24641526 - RSINE1 SINE B4 -2 163 8 2 1668 314 328 71 32 chrX 142008812 142008938 -24641358 - B1F1 SINE Alu -1 148 18 2 1668 218 222 0 0 chrX 142009335 142009380 -24640916 + T-rich Low_complexity Low_complexity 1 45 0 2 1668 709 239 137 11 chrX 142009476 142009666 -24640630 - B3 SINE B2 0 216 3 2 1668 750 253 20 10 chrX 142010503 142010699 -24639597 - B3A SINE B2 0 198 1 2 1668 316 319 44 64 chrX 142010859 142011063 -24639233 + L1M5 LINE L1 4639 4838 -1308 2 1668 294 151 0 0 chrX 142011620 142011693 -24638603 + (TA)n Simple_repeat Simple_repeat 2 74 0 2 1668 712 189 53 29 chrX 142012678 142012854 -24637442 + ORR1D1 LTR MaLR 1 177 -201 2 1668 634 226 13 52 chrX 142012940 142013065 -24637231 + RSINE1 SINE B4 15 134 -31 3 1668 432 0 0 0 chrX 142013065 142013113 -24637183 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1668 634 226 13 52 chrX 142013113 142013141 -24637155 + RSINE1 SINE B4 135 162 -3 3 1668 339 240 26 50 chrX 142014182 142014307 -24635989 + B1F SINE Alu 11 130 -20 3 1668 295 242 104 66 chrX 142014844 142014855 -24635441 + MT2B LTR ERVL 155 169 -432 3 1668 574 211 138 15 chrX 142014855 142014985 -24635311 + B1_Mur2 SINE Alu 2 147 -2 3 1668 22 0 0 0 chrX 142015110 142015132 -24635164 + AT_rich Low_complexity Low_complexity 1 22 0 3 1668 787 327 27 61 chrX 142015520 142015895 -24634401 + MLT1A0 LTR MaLR 1 362 -3 3 1668 485 271 193 0 chrX 142016428 142016609 -24633687 - B3 SINE B2 0 216 1 3 1668 21 0 0 0 chrX 142017796 142017817 -24632479 + AT_rich Low_complexity Low_complexity 1 21 0 3 1668 35159 79 5 2 chrX 142018182 142024331 -24625965 - L1Md_F2 LINE L1 -3 6579 413 3 1668 231 197 79 66 chrX 142024348 142024424 -24625872 - RLTR21 LTR ERVK -918 654 578 4 1668 277 317 48 0 chrX 142025140 142025244 -24625052 - HAL1 LINE L1 -1083 1424 1316 4 1668 195 129 0 0 chrX 142025355 142025386 -24624910 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1668 21 0 0 0 chrX 142025923 142025944 -24624352 + AT_rich Low_complexity Low_complexity 1 21 0 4 1668 695 125 324 0 chrX 142025944 142026080 -24624216 - B2_Mm2 SINE B2 -14 181 2 4 1668 492 18 0 0 chrX 142026095 142026152 -24624144 + (TA)n Simple_repeat Simple_repeat 1 57 0 4 1668 889 140 7 0 chrX 142026153 142026289 -24624007 - B2_Mm2 SINE B2 -58 137 1 4 1668 1554 43 0 5 chrX 142026415 142026602 -24623694 - B2_Mm1a SINE B2 -7 186 1 4 1668 586 299 7 7 chrX 142027028 142027166 -24623130 - B1_Mur1 SINE Alu -11 138 1 4 1668 763 304 78 12 chrX 142027185 142027642 -24622654 - L1MA6 LINE L1 -475 5825 5307 4 1668 21 36 0 0 chrX 142027652 142027680 -24622616 + AT_rich Low_complexity Low_complexity 1 28 0 5 1668 995 161 58 0 chrX 142027683 142027857 -24622439 + B2_Mm2 SINE B2 2 185 -10 5 1668 400 89 0 0 chrX 142027910 142027966 -24622330 + B2_Mm2 SINE B2 118 173 -22 5 1668 487 315 95 0 chrX 142028141 142028275 -24622021 - L1MA6 LINE L1 -1025 5118 4968 4 1668 315 71 0 0 chrX 142028275 142028317 -24621979 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1668 487 315 95 0 chrX 142028317 142028414 -24621882 - L1MA6 LINE L1 -1176 4967 4866 4 1668 1733 184 54 38 chrX 142028414 142028782 -24621514 + ORR1B1 LTR MaLR 1 374 -20 5 1668 572 260 44 57 chrX 142029088 142029316 -24620980 - RLTR15 LTR ERVK -134 225 1 5 1668 1690 196 58 40 chrX 142029352 142029729 -24620567 - ORR1C2 LTR MaLR 0 384 1 5 1668 1397 70 38 0 chrX 142029921 142030106 -24620190 - B2_Mm2 SINE B2 -3 192 1 5 1668 364 335 113 22 chrX 142030111 142030340 -24619956 - HAL1 LINE L1 -2204 303 54 5 1668 237 267 0 26 chrX 142030854 142030931 -24619365 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 5 1668 377 354 142 29 chrX 142030939 142031178 -24619118 - B4 SINE B4 -17 275 10 6 1668 378 0 0 0 chrX 142031327 142031369 -24618927 + (TTTCC)n Simple_repeat Simple_repeat 1 42 0 6 1668 1370 29 12 0 chrX 142031369 142031538 -24618758 + (TCTCC)n Simple_repeat Simple_repeat 3 174 0 6 1668 246 174 0 0 chrX 142031538 142031584 -24618712 + T-rich Low_complexity Low_complexity 1 46 0 6 1668 442 326 93 0 chrX 142031585 142031714 -24618582 - ID_B1 SINE B4 0 224 84 6 1668 668 368 142 35 chrX 142031926 142032441 -24617855 + L1MDa LINE L1 205 774 -5859 6 1668 830 299 5 5 chrX 142032557 142032769 -24617527 + B3 SINE B2 5 216 0 6 1668 274 358 93 75 chrX 142032769 142032830 -24617466 + B4A SINE B4 7 284 -8 6 1668 27 29 0 0 chrX 142033028 142033062 -24617234 + AT_rich Low_complexity Low_complexity 1 34 0 6 1668 2687 175 40 2 chrX 142033533 142034036 -24616260 + Lx LINE L1 6128 6649 -5 6 1668 1206 55 0 0 chrX 142034040 142034186 -24616110 + B1_Mm SINE Alu 1 146 -1 7 1668 302 333 54 9 chrX 142034564 142034676 -24615620 - PB1D10 SINE Alu 0 117 1 7 1668 188 331 101 43 chrX 142035637 142035776 -24614520 - MIR SINE MIR -1 261 115 7 1668 2150 213 7 15 chrX 142035777 142036231 -24614065 + Lx7 LINE L1 6884 7333 -363 7 1668 1272 102 16 16 chrX 142037069 142037258 -24613038 + B2_Mm2 SINE B2 6 194 -1 7 1668 268 206 48 67 chrX 142037260 142037364 -24612932 + Lx7 LINE L1 7595 7696 0 7 1668 270 342 0 0 chrX 142037561 142037640 -24612656 - MIR SINE MIR -183 79 1 7 1668 458 276 152 31 chrX 142038573 142038764 -24611532 + B3 SINE B2 2 215 -1 7 1668 904 108 14 0 chrX 142038785 142038933 -24611363 + (CA)n Simple_repeat Simple_repeat 1 150 0 7 1668 4109 224 33 27 chrX 142038935 142039900 -24610396 + Lx9 LINE L1 6557 7527 -117 7 1668 255 189 0 0 chrX 142039913 142039966 -24610330 + (TA)n Simple_repeat Simple_repeat 1 53 0 7 1668 25 0 0 0 chrX 142040461 142040486 -24609810 + AT_rich Low_complexity Low_complexity 1 25 0 7 1668 24 53 0 0 chrX 142040801 142040839 -24609457 + AT_rich Low_complexity Low_complexity 1 38 0 8 1668 258 149 0 0 chrX 142040999 142041029 -24609267 + (TTTTC)n Simple_repeat Simple_repeat 1 30 0 8 1668 1056 106 0 0 chrX 142041029 142041208 -24609088 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 8 1668 4487 97 9 9 chrX 142041208 142041889 -24608407 - L1_Mus3 LINE L1 0 6638 5974 8 1668 3193 186 13 128 chrX 142041890 142042557 -24607739 + L1_Mur3 LINE L1 4856 5436 -444 8 1668 8465 30 1 0 chrX 142042557 142043552 -24606744 + L1Md_T LINE L1 5587 6582 0 8 1668 3193 186 13 128 chrX 142043552 142043779 -24606517 + L1_Mur3 LINE L1 5437 5647 -233 8 1668 1565 216 148 15 chrX 142043757 142044156 -24606140 + Lx7 LINE L1 6838 7289 -407 8 1668 422 282 117 24 chrX 142044167 142044458 -24605838 + Lx7 LINE L1 7356 7673 -23 8 1668 351 65 0 0 chrX 142044875 142044921 -24605375 + (TTA)n Simple_repeat Simple_repeat 3 48 0 8 1668 342 0 0 0 chrX 142045034 142045072 -24605224 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 1668 481 316 68 34 chrX 142045652 142045829 -24604467 - MIR3 SINE MIR -23 185 3 8 1668 189 0 0 0 chrX 142046630 142046651 -24603645 + (T)n Simple_repeat Simple_repeat 1 21 0 9 1668 312 290 93 0 chrX 142046651 142046758 -24603538 - PB1D10 SINE Alu 0 117 1 9 1668 498 75 0 0 chrX 142048151 142048218 -24602078 + (CA)n Simple_repeat Simple_repeat 2 68 0 9 1668 266 331 113 0 chrX 142048506 142048630 -24601666 - Lx6 LINE L1 -4 7456 7319 9 1668 432 97 0 0 chrX 142048694 142048756 -24601540 + (CA)n Simple_repeat Simple_repeat 1 62 0 9 1668 511 283 47 8 chrX 142048844 142048972 -24601324 - B1_Mur1 SINE Alu -5 144 12 9 1668 208 311 192 10 chrX 142049352 142049456 -24600840 - L2a LINE L2 -358 3068 2946 9 1668 234 386 10 0 chrX 142050079 142050180 -24600116 - L3 LINE CR1 -1598 2891 2790 9 1668 281 312 10 10 chrX 142050311 142050408 -24599888 + MIR SINE MIR 137 233 -29 9 1668 203 89 71 0 chrX 142050438 142050494 -24599802 + (TAA)n Simple_repeat Simple_repeat 1 60 0 9 1668 738 297 72 0 chrX 142050902 142051097 -24599199 - B3 SINE B2 0 216 8 1 1668 369 307 26 9 chrX 142051163 142051278 -24599018 + PB1D10 SINE Alu 1 117 0 1 1668 309 258 135 38 chrX 142051359 142051492 -24598804 + B1F SINE Alu 3 148 -1 1 1668 2541 224 32 2 chrX 142051650 142052151 -24598145 - Lx5 LINE L1 -8 7042 6527 1 1668 542 264 39 0 chrX 142052735 142052913 -24597383 + RLTR42-int LTR ERVK 2123 2307 -3215 1 1668 339 25 0 0 chrX 142053687 142053727 -24596569 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 1 1668 776 62 88 0 chrX 142053727 142053840 -24596456 - B1_Mus1 SINE Alu -13 135 13 1 1668 404 317 40 8 chrX 142054801 142054925 -24595371 + B1F2 SINE Alu 21 148 -1 1 1668 555 221 50 58 chrX 142055299 142055438 -24594858 - ID_B1 SINE B4 -1 223 86 1 1668 813 269 65 50 chrX 142055596 142055858 -24594438 - MTD LTR MaLR -2 417 152 1 1668 1093 305 152 13 chrX 142055860 142056391 -24593905 - Lx8 LINE L1 -38 7435 6831 1 1668 1597 176 122 9 chrX 142056433 142056776 -24593520 + ORR1C2 LTR MaLR 3 384 0 1 1668 2169 274 71 45 chrX 142056792 142057870 -24592426 - Lx8 LINE L1 -858 6615 5470 1 1668 2762 51 3 0 chrX 142057878 142058231 -24592065 - L1_Mm LINE L1 -1310 4573 4220 1 1668 365 58 19 0 chrX 142058599 142058651 -24591645 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 1668 39 38 0 0 chrX 142058810 142058863 -24591433 + AT_rich Low_complexity Low_complexity 1 53 0 1 1668 484 308 18 55 chrX 142058889 142059054 -24591242 - RSINE1 SINE B4 0 165 7 1 1668 30159 30 1 0 chrX 142059215 142062844 -24587452 + L1Md_T LINE L1 1957 5586 -297 1 1668 8186 48 0 0 chrX 142062845 142063839 -24586457 + L1Md_T LINE L1 5588 6581 -1 1 1668 236 265 0 0 chrX 142063889 142063938 -24586358 + B3A SINE B2 20 68 -130 1 1668 2248 88 81 0 chrX 142063938 142064199 -24586097 + ORR1A1 LTR MaLR 1 281 -65 1 1668 189 0 0 0 chrX 142064199 142064220 -24586076 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1668 2248 88 81 0 chrX 142064220 142064278 -24586018 + ORR1A1 LTR MaLR 282 345 -1 1 1668 12682 66 38 3 chrX 142064278 142066010 -24584286 + ORR1A1-int LTR MaLR 1 1792 0 1 1668 2331 60 63 0 chrX 142066010 142066328 -24583968 + ORR1A1 LTR MaLR 1 338 -8 1 1668 381 324 45 76 chrX 142066313 142066470 -24583826 + B3A SINE B2 46 197 -1 1 1668 263 259 0 0 chrX 142067533 142067591 -24582705 + RSINE1 SINE B4 2 59 -106 1 1668 594 63 0 0 chrX 142067704 142067783 -24582513 + (GA)n Simple_repeat Simple_repeat 2 80 0 1 1668 356 298 43 0 chrX 142068281 142068375 -24581921 + L2a LINE L2 3311 3408 -18 1 1668 31 26 0 0 chrX 142068573 142068611 -24581685 + AT_rich Low_complexity Low_complexity 1 38 0 1 1668 469 298 25 113 chrX 142069326 142069530 -24580766 + RMER30 DNA MER1_type 12 197 -5 1 1668 270 325 15 37 chrX 142069655 142069789 -24580507 - B1F SINE Alu -18 131 1 1 1668 716 271 42 48 chrX 142069914 142070224 -24580072 - Lx7 LINE L1 -1453 6243 5936 1 1668 513 179 11 2 chrX 142070220 142070338 -24579958 - L1_Mur3 LINE L1 -3502 2378 2247 1 1668 394 270 0 83 chrX 142070437 142070558 -24579738 + PB1D10 SINE Alu 6 116 -1 1 1668 584 308 5 62 chrX 142070560 142070768 -24579528 + B3A SINE B2 3 198 0 1 1668 238 360 38 61 chrX 142070843 142071056 -24579240 + MLT1J1 LTR MaLR 114 321 -123 1 1668 261 136 77 77 chrX 142071676 142071819 -24578477 + (CATATA)n Simple_repeat Simple_repeat 3 145 0 1 1668 23 0 0 0 chrX 142071987 142072010 -24578286 + AT_rich Low_complexity Low_complexity 1 23 0 1 1668 521 346 45 0 chrX 142072331 142072487 -24577809 - RSINE1 SINE B4 0 165 3 1 1668 189 0 0 0 chrX 142072767 142072788 -24577508 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 1668 390 21 0 0 chrX 142072788 142072834 -24577462 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 1668 225 0 0 0 chrX 142073115 142073140 -24577156 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1668 432 0 0 0 chrX 142073332 142073380 -24576916 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1668 1092 203 10 5 chrX 142073948 142074151 -24576145 + B3 SINE B2 2 205 -11 1 1668 183 333 61 68 chrX 142074236 142074368 -24575928 - MIR SINE MIR -111 151 21 1 1668 26 50 0 0 chrX 142075166 142075206 -24575090 + AT_rich Low_complexity Low_complexity 1 40 0 1 1668 792 79 7 21 chrX 142075897 142076039 -24574257 + Lx3A LINE L1 6841 6980 -1 1 1668 22 0 0 0 chrX 142076718 142076740 -24573556 + AT_rich Low_complexity Low_complexity 1 22 0 1 1668 554 41 0 14 chrX 142077258 142077332 -24572964 + (CA)n Simple_repeat Simple_repeat 1 73 0 1 1668 309 51 0 0 chrX 142077332 142077371 -24572925 + (CTA)n Simple_repeat Simple_repeat 1 39 0 1 1668 1133 288 68 20 chrX 142077821 142078221 -24572075 - MTD LTR MaLR 0 419 1 1 1668 1139 75 0 0 chrX 142078640 142078786 -24571510 - B1_Mm SINE Alu -1 146 1 1 1668 207 0 0 0 chrX 142078876 142078899 -24571397 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 1 1668 479 168 11 0 chrX 142078899 142078994 -24571302 + GA-rich Low_complexity Low_complexity 3 98 0 1 1668 911 35 9 0 chrX 142078994 142079109 -24571187 + (GGAAA)n Simple_repeat Simple_repeat 4 119 0 1 1668 368 270 116 21 chrX 142079175 142079364 -24570932 - L1_Rod LINE L1 -379 5468 5262 1 1668 403 317 0 38 chrX 142079455 142079560 -24570736 - RSINE1 SINE B4 -20 145 45 1 1668 307 337 75 10 chrX 142079574 142079775 -24570521 - L1M2 LINE L1 -931 5212 4999 1 1668 181 320 101 31 chrX 142080173 142080302 -24569994 + MIR3 SINE MIR 70 207 -1 1 208 312 137 0 0 chrX 142082044 142082095 -24568201 + (CAA)n Simple_repeat Simple_repeat 1 51 0 1 1669 251 351 4 166 chrX 142082101 142082330 -24567966 + MLT1E1A LTR MaLR 386 631 -49 1 1669 515 309 35 46 chrX 142082848 142083021 -24567275 - ID_B1 SINE B4 -1 223 53 1 1669 335 335 117 0 chrX 142083183 142083371 -24566925 + L1MEf LINE L1 1208 1417 -5685 1 1669 314 306 80 5 chrX 142083512 142083699 -24566597 - L1MB7 LINE L1 -207 5977 5777 1 1669 300 309 0 0 chrX 142083740 142083808 -24566488 + ID_B1 SINE B4 82 149 -75 1 1669 288 325 38 0 chrX 142083808 142083820 -24566476 + B1F1 SINE Alu 1 83 -66 1 1669 722 306 49 30 chrX 142083877 142084270 -24566026 + L1MEf LINE L1 1802 2170 -4932 1 1669 564 212 71 54 chrX 142084446 142084707 -24565589 + RMER17C LTR ERVK 1 345 -65 1 1669 813 97 104 1 chrX 142084742 142084883 -24565413 + B2_Mm2 SINE B2 1 154 -39 1 1669 1157 87 0 0 chrX 142084889 142085061 -24565235 - L1_Mm LINE L1 -3687 2196 2025 1 1669 1279 62 0 0 chrX 142085074 142085250 -24565046 + L1Md_F2 LINE L1 6407 6582 0 1 1669 260 250 0 15 chrX 142085545 142085610 -24564686 - ID2 SINE ID -14 69 6 1 1669 336 285 51 28 chrX 142085605 142085732 -24564564 - PB1D10 SINE Alu -21 128 3 1 1669 1472 204 189 83 chrX 142085777 142086259 -24564037 - MT2A LTR ERVL 0 533 1 1 1669 301 281 0 0 chrX 142086263 142086345 -24563951 - L1MB2 LINE L1 -53 6118 6037 1 1669 316 309 42 21 chrX 142086503 142086599 -24563697 + PB1D10 SINE Alu 12 109 -8 1 1669 745 297 29 25 chrX 142086787 142087029 -24563267 - MLT-int LTR MaLR -6 1729 1487 1 1669 287 331 83 0 chrX 142087036 142087169 -24563127 + L1MC3 LINE L1 6698 6841 -944 1 1669 240 219 31 0 chrX 142087194 142087258 -24563038 + L1MC3 LINE L1 6898 6963 -822 1 1669 576 318 0 25 chrX 142087333 142087491 -24562805 + RSINE1 SINE B4 12 165 0 1 1669 228 356 119 10 chrX 142087491 142087517 -24562779 + B3 SINE B2 50 215 -1 1 1669 22 0 0 0 chrX 142087606 142087628 -24562668 + AT_rich Low_complexity Low_complexity 1 22 0 1 1669 363 176 29 0 chrX 142087667 142087735 -24562561 - ORR1D1 LTR MaLR -304 70 1 1 1669 230 343 9 37 chrX 142087748 142087857 -24562439 + L2 LINE L2 2757 2862 -557 1 1669 232 235 9 67 chrX 142088301 142088406 -24561890 - Lx9 LINE L1 -26 7618 7520 1 1669 363 23 0 0 chrX 142088408 142088452 -24561844 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1669 1240 194 39 16 chrX 142088489 142088745 -24561551 + Lx9 LINE L1 7164 7425 -219 1 1669 703 71 9 17 chrX 142088930 142089045 -24561251 + Lx2 LINE L1 6882 6995 -2 1 1669 23 0 0 0 chrX 142089619 142089642 -24560654 + AT_rich Low_complexity Low_complexity 1 23 0 1 1669 319 256 22 44 chrX 142089648 142089738 -24560558 + PB1D10 SINE Alu 30 117 0 1 1669 550 211 6 123 chrX 142089832 142089994 -24560302 + B1_Mus2 SINE Alu 5 147 0 1 1669 255 402 0 0 chrX 142090300 142090397 -24559899 - MIRc SINE MIR -94 174 78 1 1669 543 128 9 18 chrX 142090511 142090622 -24559674 + CT-rich Low_complexity Low_complexity 3 112 0 1 1669 279 0 0 0 chrX 142091662 142091693 -24558603 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1669 687 269 30 25 chrX 142092177 142092375 -24557921 + B3 SINE B2 3 201 -15 1 1669 430 286 7 52 chrX 142092704 142092859 -24557437 + B1F SINE Alu 2 149 0 1 1669 258 245 29 78 chrX 142092866 142092968 -24557328 + L1MD LINE L1 5675 5771 -409 1 1669 217 25 48 48 chrX 142092978 142093020 -24557276 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 1 1669 452 267 0 55 chrX 142093098 142093225 -24557071 + PB1 SINE Alu 1 120 -7 1 1669 359 333 181 11 chrX 142093264 142093540 -24556756 + L1ME1 LINE L1 5842 6164 -15 1 1669 23 0 0 0 chrX 142093579 142093602 -24556694 + AT_rich Low_complexity Low_complexity 1 23 0 1 1669 218 273 30 15 chrX 142093989 142094056 -24556240 + MIR SINE MIR 91 158 -104 1 1669 207 0 0 0 chrX 142094162 142094185 -24556111 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1669 4628 213 27 1 chrX 142094274 142095177 -24555119 + Lx7 LINE L1 6327 7252 -444 1 1669 726 188 90 22 chrX 142095210 142095415 -24554881 - Lx4B LINE L1 -8 7050 6754 1 1669 1936 169 24 11 chrX 142095414 142095786 -24554510 + Lx4B LINE L1 6217 6593 -465 1 1669 768 241 46 55 chrX 142095809 142096116 -24554180 + Lx7 LINE L1 7295 7598 -98 1 1669 268 415 48 27 chrX 142096315 142096503 -24553793 + MER58A DNA MER1_type 32 223 -1 1 1669 370 246 0 0 chrX 142096612 142096681 -24553615 + RSINE1 SINE B4 65 133 -32 1 1669 185 211 0 17 chrX 142096759 142096817 -24553479 + (TA)n Simple_repeat Simple_repeat 1 57 0 2 1669 396 0 0 0 chrX 142096975 142097019 -24553277 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 1669 405 0 0 0 chrX 142097021 142097066 -24553230 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1669 493 276 24 0 chrX 142097066 142097189 -24553107 - RSINE1 SINE B4 -37 128 3 2 1669 289 213 0 0 chrX 142097226 142097273 -24553023 + B3 SINE B2 2 48 -168 2 1669 5497 57 10 0 chrX 142097405 142098105 -24552191 + L1_Mus3 LINE L1 5926 6632 -6 2 1669 237 132 0 0 chrX 142098110 142098148 -24552148 + (A)n Simple_repeat Simple_repeat 1 38 0 2 1669 626 234 35 28 chrX 142098574 142098718 -24551578 - B1_Mur1 SINE Alu -7 142 4 2 1669 41 36 0 0 chrX 142098731 142098786 -24551510 + AT_rich Low_complexity Low_complexity 1 55 0 2 1669 469 303 15 0 chrX 142098833 142098965 -24551331 - B3 SINE B2 -16 200 67 2 1669 428 328 0 98 chrX 142099096 142099228 -24551068 + PB1D9 SINE Alu 1 119 -1 2 1669 260 273 193 7 chrX 142099243 142099369 -24550927 - PB1D9 SINE Alu -7 142 1 2 1669 361 225 57 36 chrX 142099485 142099620 -24550676 - PB1D10 SINE Alu -9 140 1 2 1669 384 309 21 0 chrX 142100478 142100575 -24549721 + PB1D10 SINE Alu 6 104 -13 2 1669 363 314 9 38 chrX 142100597 142100703 -24549593 + B1F2 SINE Alu 47 149 0 2 1669 890 339 89 23 chrX 142100801 142101393 -24548903 - Lx8 LINE L1 -783 6690 6048 2 1669 440 187 83 52 chrX 142101506 142101602 -24548694 - U6 snRNA snRNA 0 107 9 2 1669 410 228 16 95 chrX 142104444 142104570 -24545726 - MER57A-int LTR ERV1 -271 5916 5801 2 1669 300 284 0 0 chrX 142104608 142104675 -24545621 + ID SINE ID 5 71 -153 2 1669 21 36 0 0 chrX 142104974 142105002 -24545294 + AT_rich Low_complexity Low_complexity 1 28 0 2 1669 433 204 6 56 chrX 142105031 142105187 -24545109 - B1F2 SINE Alu -5 144 23 2 1669 599 286 174 44 chrX 142105291 142105861 -24544435 - L1MB3 LINE L1 -219 5964 5321 2 1669 269 320 60 30 chrX 142105881 142105981 -24544315 - B1F SINE Alu -37 112 10 2 1669 339 287 271 7 chrX 142106008 142106159 -24544137 - B3A SINE B2 -7 191 1 2 1669 1288 64 8 13 chrX 142106160 142106398 -24543898 + (TTTTC)n Simple_repeat Simple_repeat 1 236 0 2 1669 452 240 52 0 chrX 142106409 142106505 -24543791 - B1F2 SINE Alu -5 144 44 2 1669 1649 64 14 9 chrX 142106892 142107094 -24543202 + L1Md_F2 LINE L1 6360 6561 -21 2 1669 1699 42 5 0 chrX 142107094 142107307 -24542989 + L1Md_A LINE L1 6368 6581 -1 2 1669 1649 64 14 9 chrX 142107307 142107326 -24542970 + L1Md_F2 LINE L1 6562 6582 0 2 1669 24 32 0 0 chrX 142107384 142107415 -24542881 + AT_rich Low_complexity Low_complexity 1 31 0 2 1669 282 143 0 0 chrX 142107664 142107706 -24542590 + B1_Mur2 SINE Alu 100 141 -8 2 1669 26 0 0 0 chrX 142107900 142107926 -24542370 + AT_rich Low_complexity Low_complexity 1 26 0 2 1669 717 267 13 84 chrX 142108331 142108556 -24541740 - B3 SINE B2 -6 210 2 2 1669 414 0 0 0 chrX 142108669 142108715 -24541581 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1669 372 294 82 9 chrX 142109117 142109227 -24541069 + B1F SINE Alu 24 141 -8 2 1669 250 310 28 0 chrX 142109299 142109370 -24540926 - MER47B DNA MER2_type -318 100 28 2 1669 939 233 14 10 chrX 142109963 142110171 -24540125 - B3 SINE B2 -6 210 2 2 1669 531 0 0 0 chrX 142110565 142110624 -24539672 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 1669 378 74 0 0 chrX 142110624 142110677 -24539619 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1669 410 293 20 10 chrX 142110693 142110793 -24539503 - B3A SINE B2 -95 103 3 2 1669 637 175 6 6 chrX 142111041 142111208 -24539088 + CT-rich Low_complexity Low_complexity 1 167 0 2 1669 186 174 0 0 chrX 142111230 142111276 -24539020 + CT-rich Low_complexity Low_complexity 1 46 0 2 1669 872 301 69 14 chrX 142111276 142111552 -24538744 - B4 SINE B4 0 292 2 2 1669 216 0 0 0 chrX 142111593 142111617 -24538679 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1669 988 95 0 7 chrX 142111617 142111755 -24538541 - B1_Mus1 SINE Alu -9 139 3 2 1669 1037 74 7 0 chrX 142111768 142111916 -24538380 + (TTC)n Simple_repeat Simple_repeat 2 150 0 2 1669 224 182 200 0 chrX 142111923 142111978 -24538318 - ID2 SINE ID -14 69 4 2 1669 1080 270 24 20 chrX 142112299 142112651 -24537645 + L1_Rod LINE L1 5368 5698 -149 2 1669 214 233 0 0 chrX 142113331 142113374 -24536922 - MER5A DNA MER1_type 0 189 147 2 1669 392 346 29 0 chrX 142113374 142113478 -24536818 + B1F1 SINE Alu 2 108 -41 2 1669 264 327 89 0 chrX 142113633 142113734 -24536562 - PB1D7 SINE Alu -8 112 3 2 1669 745 306 62 34 chrX 142114570 142115070 -24535226 + L1MC LINE L1 2282 2795 -3351 2 1669 1169 258 143 110 chrX 142115077 142115122 -24535174 - MT2B LTR ERVL -8 593 545 2 1669 498 75 0 0 chrX 142115122 142115189 -24535107 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 2 1669 1169 258 143 110 chrX 142115189 142115211 -24535085 - MT2B LTR ERVL -57 544 539 2 1669 467 33 0 16 chrX 142115211 142115273 -24535023 + (CA)n Simple_repeat Simple_repeat 1 61 0 2 1669 1169 258 143 110 chrX 142115273 142115778 -24534518 - MT2B LTR ERVL -63 538 1 2 1669 229 286 47 8 chrX 142115778 142115905 -24534391 + L1MC LINE L1 2794 2925 -3221 2 1669 404 269 79 30 chrX 142116016 142116219 -24534077 + L1MC LINE L1 2935 3147 -2999 2 1669 1121 269 27 9 chrX 142116217 142116555 -24533741 + L1MC LINE L1 3589 3932 -2214 2 1669 391 331 49 14 chrX 142116635 142116779 -24533517 + RSINE1 SINE B4 2 150 -15 2 1669 447 19 0 0 chrX 142116847 142116899 -24533397 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 1669 643 229 67 17 chrX 142117030 142117208 -24533088 - RMER1C Other Other 0 1342 1156 2 1669 7144 91 26 1 chrX 142117404 142118616 -24531680 - L1_Mus3 LINE L1 -44 6594 5357 2 1669 400 143 0 0 chrX 142118621 142118684 -24531612 + L1_Mm LINE L1 4868 4930 -953 2 1669 255 237 13 38 chrX 142118697 142118776 -24531520 - L1MC LINE L1 -2024 5761 5685 2 1669 6232 68 22 2 chrX 142118770 142119587 -24530709 + L1_Mus1 LINE L1 5735 6567 0 2 1669 458 261 132 21 chrX 142119588 142119823 -24530473 - L1MC LINE L1 -644 5700 5440 2 1669 488 200 79 35 chrX 142119826 142119940 -24530356 - PB1D9 SINE Alu -1 119 1 2 1669 313 229 59 59 chrX 142119863 142119965 -24530331 - MT2B LTR ERVL -361 240 139 2 1669 714 230 79 30 chrX 142120216 142120418 -24529878 - B3 SINE B2 0 216 5 2 1669 3066 138 41 12 chrX 142120602 142121186 -24529110 + Lx5 LINE L1 5350 5953 -1097 2 1669 4839 11 0 0 chrX 142121191 142121733 -24528563 + L1Md_T LINE L1 6041 6582 0 2 1669 258 81 0 0 chrX 142121749 142121786 -24528510 + (A)n Simple_repeat Simple_repeat 1 37 0 2 1669 447 68 0 0 chrX 142121798 142121857 -24528439 + (TG)n Simple_repeat Simple_repeat 1 59 0 2 1669 189 0 0 0 chrX 142122014 142122035 -24528261 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1669 1954 196 22 58 chrX 142122035 142122485 -24527811 + Lx5 LINE L1 5946 6379 -671 2 1669 1388 191 29 7 chrX 142122486 142122761 -24527535 + Lx5 LINE L1 6767 7047 -3 2 1669 713 278 159 24 chrX 142123582 142123954 -24526342 - L1MA6 LINE L1 0 6300 5879 2 1669 185 296 46 167 chrX 142124058 142124121 -24526175 + L2 LINE L2 2428 2470 -949 2 1669 4025 95 2 30 chrX 142124121 142124164 -24526132 - L1Md_F2 LINE L1 -11 6571 6536 2 1669 962 154 68 113 chrX 142124164 142124501 -24525795 - RLTRETN_Mm LTR ERVK 0 322 1 2 1669 4025 95 2 30 chrX 142124501 142125056 -24525240 - L1Md_F2 LINE L1 -47 6535 5990 2 1669 185 296 46 167 chrX 142125056 142125166 -24525130 + L2 LINE L2 2471 2580 -839 2 1669 483 275 64 21 chrX 142125180 142125321 -24524975 + B1F SINE Alu 3 149 0 2 1669 209 59 0 56 chrX 142125321 142125357 -24524939 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 2 1669 649 333 59 69 chrX 142125557 142125860 -24524436 + MLT1A LTR MaLR 62 361 -13 2 1669 457 251 105 32 chrX 142126228 142126377 -24523919 - B3 SINE B2 -6 192 19 2 1669 2992 43 19 0 chrX 142126384 142126753 -24523543 + L1_Mus1 LINE L1 6191 6566 -1 2 1669 248 333 15 0 chrX 142126776 142126842 -24523454 - ID4 SINE ID -8 75 9 2 1669 204 97 0 0 chrX 142127386 142127417 -24522879 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2 1669 799 282 0 5 chrX 142127419 142127633 -24522663 - B3 SINE B2 -3 213 1 2 1669 852 163 0 0 chrX 142127747 142127900 -24522396 + GA-rich Low_complexity Low_complexity 2 154 0 2 1669 212 0 36 0 chrX 142130131 142130159 -24520137 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1669 843 46 0 0 chrX 142130159 142130266 -24520030 + (GA)n Simple_repeat Simple_repeat 2 109 0 2 1669 936 223 22 31 chrX 142130490 142130717 -24519579 - URR1B DNA MER1_type 0 225 1 2 1669 208 103 0 0 chrX 142131235 142131264 -24519032 + (GGAA)n Simple_repeat Simple_repeat 3 31 0 2 1669 300 137 0 0 chrX 142131264 142131315 -24518981 + (GGGAGA)n Simple_repeat Simple_repeat 6 56 0 2 1669 246 323 36 31 chrX 142133839 142134034 -24516262 - L1ME1 LINE L1 -132 6047 5852 2 1669 221 372 48 24 chrX 142134217 142134341 -24515955 - RSINE1 SINE B4 0 165 39 2 1669 986 236 94 20 chrX 142135802 142136152 -24514144 - L1MA5 LINE L1 -9 6291 5916 2 1669 597 231 30 7 chrX 142136846 142136981 -24513315 - B1_Mur3 SINE Alu -1 148 11 2 1669 627 291 7 0 chrX 142137352 142137493 -24512803 - B3 SINE B2 -74 142 1 2 1669 393 110 0 0 chrX 142137618 142137691 -24512605 + (T)n Simple_repeat Simple_repeat 1 73 0 2 1669 1033 109 7 0 chrX 142137693 142137840 -24512456 - B1_Mur4 SINE Alu -1 149 2 2 1669 6250 138 15 62 chrX 142138135 142139418 -24510878 - Lx LINE L1 -6 6648 5391 2 1669 217 362 43 0 chrX 142139444 142139538 -24510758 - PB1D7 SINE Alu 0 120 23 2 1669 333 335 5 0 chrX 142139762 142139947 -24510349 + L1MB5 LINE L1 4350 4535 -1605 2 1669 701 236 64 25 chrX 142140308 142140512 -24509784 - B3 SINE B2 0 216 5 2 1669 523 224 0 27 chrX 142140515 142140699 -24509597 + CT-rich Low_complexity Low_complexity 2 180 0 2 1669 1099 311 41 32 chrX 142141215 142141706 -24508590 + L1MB5 LINE L1 5265 5765 -409 2 1669 2113 196 29 7 chrX 142141706 142142118 -24508178 + MTC LTR MaLR 1 421 0 2 1669 1099 311 41 32 chrX 142142118 142142241 -24508055 + L1MB5 LINE L1 5766 5884 -290 2 1669 30 59 0 0 chrX 142142921 142142972 -24507324 + AT_rich Low_complexity Low_complexity 1 51 0 2 1669 312 373 17 17 chrX 142142997 142143117 -24507179 + PB1D7 SINE Alu 1 120 0 3 1669 442 265 90 8 chrX 142143281 142143414 -24506882 - B1_Mus2 SINE Alu -2 145 2 3 1669 279 297 0 13 chrX 142143546 142143621 -24506675 - ID_B1 SINE B4 -2 222 149 3 1669 192 77 0 0 chrX 142143923 142143949 -24506347 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1669 315 237 9 76 chrX 142144077 142144182 -24506114 - L1MA4A LINE L1 -445 5858 5761 3 1669 10342 3 0 0 chrX 142144279 142146132 -24504164 - L1Md_A LINE L1 0 6582 4730 3 1669 255 93 0 0 chrX 142146132 142146175 -24504121 + (T)n Simple_repeat Simple_repeat 1 43 0 3 1669 40744 8 0 0 chrX 142146178 142152753 -24497543 - L1Md_T LINE L1 0 6582 9 3 1669 262 296 130 0 chrX 142152748 142152863 -24497433 - L1M3 LINE L1 -578 5590 5461 3 1669 255 284 39 10 chrX 142153890 142153993 -24496303 - LTR48 LTR ERV1 -60 727 622 3 1669 472 247 46 33 chrX 142154530 142154681 -24495615 - Lx8 LINE L1 -386 7087 6935 3 1669 1492 219 65 5 chrX 142155088 142155460 -24494836 - Lx9 LINE L1 -10 7634 7241 3 1669 849 237 0 0 chrX 142155610 142155779 -24494517 - B3 SINE B2 -42 174 6 3 1669 225 305 62 28 chrX 142155906 142156051 -24494245 - Charlie1a DNA MER1_type -1 1454 1305 3 1669 220 224 14 43 chrX 142156590 142156660 -24493636 + (CATATA)n Simple_repeat Simple_repeat 4 71 0 3 1669 1193 212 63 0 chrX 142156927 142157182 -24493114 - Lx6 LINE L1 0 7460 7190 3 1669 438 227 111 52 chrX 142157286 142157421 -24492875 - B1_Mur2 SINE Alu -6 143 1 3 1669 602 178 0 0 chrX 142157465 142157566 -24492730 + ORR1D1 LTR MaLR 3 103 -271 3 1669 465 50 0 0 chrX 142157571 142157631 -24492665 + (TTCC)n Simple_repeat Simple_repeat 2 61 0 3 1669 364 296 16 80 chrX 142157640 142157707 -24492589 - PB1D10 SINE Alu 0 117 58 3 1669 2467 162 28 223 chrX 142157707 142158564 -24491732 + RMER6C LTR ERVK 1 690 0 3 1669 364 296 16 80 chrX 142158564 142158621 -24491675 - PB1D10 SINE Alu -60 57 1 3 1669 353 245 117 70 chrX 142158962 142159133 -24491163 - B3A SINE B2 -18 180 2 3 1669 2734 223 50 29 chrX 142160098 142160783 -24489513 + Lx9 LINE L1 6837 7535 -109 3 1669 7801 84 12 9 chrX 142160777 142162049 -24488247 + L1_Mus3 LINE L1 5358 6632 -6 3 1669 374 250 0 24 chrX 142162057 142162180 -24488116 + Lx9 LINE L1 7493 7612 -32 3 1669 314 320 29 0 chrX 142162439 142162542 -24487754 + L2a LINE L2 3007 3112 -314 3 1669 180 97 0 0 chrX 142163542 142163573 -24486723 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1669 254 296 56 0 chrX 142164100 142164171 -24486125 + PB1D10 SINE Alu 8 82 -35 3 1669 385 304 51 51 chrX 142164208 142164364 -24485932 + RSINE1 SINE B4 8 163 -2 3 1669 285 75 0 0 chrX 142164397 142164437 -24485859 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1669 237 108 0 0 chrX 142164451 142164488 -24485808 + (TAG)n Simple_repeat Simple_repeat 2 38 0 3 1669 565 298 109 17 chrX 142164517 142164876 -24485420 + L1MB1 LINE L1 5511 5902 -287 3 1669 775 127 222 25 chrX 142164895 142165057 -24485239 - B2_Mm2 SINE B2 0 195 2 3 1669 4885 2 0 0 chrX 142165093 142165633 -24484663 - L1Md_A LINE L1 0 6582 6043 3 1669 212 100 0 24 chrX 142166281 142166322 -24483974 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 3 1669 263 197 90 15 chrX 142166346 142166413 -24483883 - PB1D9 SINE Alu -47 73 2 3 1669 226 244 0 0 chrX 142168055 142168096 -24482200 + Zaphod2 DNA Tip100 3484 3524 0 3 1669 1606 45 0 0 chrX 142168286 142168487 -24481809 - L1Md_T LINE L1 -1 6581 6381 3 1669 39733 26 2 6 chrX 142168487 142174941 -24475355 - L1Md_T LINE L1 0 6582 154 3 1669 393 58 0 0 chrX 142175205 142175257 -24475039 + (TA)n Simple_repeat Simple_repeat 1 52 0 3 1669 31594 98 12 8 chrX 142175309 142181781 -24468515 - L1_Mus1 LINE L1 -36 6531 217 3 1669 252 333 83 0 chrX 142182193 142182289 -24468007 + Tigger7 DNA MER2_type 204 307 -2184 3 1669 337 30 14 56 chrX 142182405 142182476 -24467820 + (TTTA)n Simple_repeat Simple_repeat 2 69 0 3 1669 518 229 98 8 chrX 142182629 142182761 -24467535 - B1F1 SINE Alu -1 148 5 3 1669 338 354 0 0 chrX 142183196 142183295 -24467001 + MER44B DNA MER2_type 1 98 -452 3 1669 3622 196 40 10 chrX 142183323 142184044 -24466252 - Lx2B LINE L1 -14 6986 6244 3 1669 2032 132 27 3 chrX 142184044 142184372 -24465924 - Lx2B LINE L1 -889 6111 5775 3 1669 348 282 90 9 chrX 142184375 142184486 -24465810 + MER44B DNA MER2_type 188 307 -243 3 1669 660 252 193 20 chrX 142184486 142184708 -24465588 + Tigger7 DNA MER2_type 2132 2386 -105 3 1669 375 23 0 0 chrX 142184708 142184752 -24465544 + (TCTA)n Simple_repeat Simple_repeat 3 46 0 3 1669 414 100 0 0 chrX 142184758 142184818 -24465478 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1669 660 252 193 20 chrX 142184818 142184884 -24465412 + Tigger7 DNA MER2_type 2393 2476 -15 3 1669 21 0 0 0 chrX 142185165 142185186 -24465110 + AT_rich Low_complexity Low_complexity 1 21 0 3 1669 253 304 142 38 chrX 142185234 142185340 -24464956 - RSINE1 SINE B4 -46 119 3 3 1669 2346 190 53 116 chrX 142185439 142186045 -24464251 - RMER19B LTR ERVK -334 568 1 3 1669 367 232 0 0 chrX 142186334 142186403 -24463893 + ID SINE ID 10 78 -146 3 1669 254 216 19 93 chrX 142186403 142186441 -24463855 + BC1_Mm scRNA scRNA 10 108 -44 3 1669 238 171 0 0 chrX 142186491 142186532 -24463764 + Lx5 LINE L1 6846 6886 -164 3 1669 316 141 0 66 chrX 142186538 142186629 -24463667 + Lx3C LINE L1 6888 6972 -4 3 1669 519 31 0 0 chrX 142186908 142186973 -24463323 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 3 1669 21 0 0 0 chrX 142187455 142187476 -24462820 + AT_rich Low_complexity Low_complexity 1 21 0 3 1669 291 166 211 35 chrX 142187721 142187846 -24462450 - B1_Mus1 SINE Alu 0 149 7 3 1669 522 334 57 44 chrX 142188927 142189567 -24460729 - L1ME1 LINE L1 -338 5995 5350 3 1669 462 330 22 51 chrX 142189570 142189845 -24460451 + Lx8 LINE L1 7200 7466 -7 3 1669 261 423 0 0 chrX 142189969 142189991 -24460305 - PB1D10 SINE Alu -1 116 6 3 1669 275 371 0 0 chrX 142189991 142190080 -24460216 - ID_B1 SINE B4 -49 175 87 3 1669 1178 74 0 0 chrX 142190619 142190767 -24459529 - B1_Mus1 SINE Alu 0 148 1 3 1669 1874 203 32 27 chrX 142191089 142191529 -24458767 + RMER10A LTR ERVL 1 442 0 3 1669 393 311 113 6 chrX 142191633 142191801 -24458495 + MLT1F1 LTR MaLR 382 567 -2 3 1669 504 0 0 0 chrX 142191967 142192023 -24458273 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1669 382 325 26 0 chrX 142192031 142192145 -24458151 - RSINE1 SINE B4 -40 125 9 3 1669 262 308 42 33 chrX 142192150 142192255 -24458041 - B1F SINE Alu -34 115 11 3 1669 410 250 23 0 chrX 142192299 142192387 -24457909 - B3A SINE B2 -108 90 1 3 1669 1459 63 11 0 chrX 142192391 142192581 -24457715 - B2_Mm1t SINE B2 0 193 2 3 1669 497 310 88 69 chrX 142193257 142193562 -24456734 + MER20B DNA MER1_type 160 470 -313 3 1669 243 235 0 0 chrX 142193687 142193738 -24456558 + MER20B DNA MER1_type 515 565 -218 3 1669 21 0 0 0 chrX 142193781 142193802 -24456494 + AT_rich Low_complexity Low_complexity 1 21 0 3 1669 636 210 126 23 chrX 142193975 142194190 -24456106 - L1M3 LINE L1 -863 5277 5041 3 1669 353 204 30 20 chrX 142194225 142194325 -24455971 + L1MA10 LINE L1 6163 6263 -71 3 1669 462 334 82 67 chrX 142195233 142195589 -24454707 + ORR1D2 LTR MaLR 10 370 0 3 1669 1029 138 23 0 chrX 142195899 142196073 -24454223 + URR1A DNA MER1_type 49 226 0 3 1669 224 30 30 0 chrX 142197346 142197379 -24452917 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 3 1669 234 355 28 0 chrX 142198258 142198365 -24451931 - MIRc SINE MIR -133 135 26 3 1669 1187 79 6 6 chrX 142199383 142199706 -24450590 + (GAA)n Simple_repeat Simple_repeat 1 323 0 3 1669 209 175 50 0 chrX 142199706 142199746 -24450550 + GA-rich Low_complexity Low_complexity 4 45 0 3 1669 260 358 0 0 chrX 142199815 142199896 -24450400 + ID_B1 SINE B4 81 161 -63 3 1669 346 311 27 80 chrX 142199824 142199936 -24450360 + PB1D10 SINE Alu 9 114 -35 3 1669 2593 307 30 10 chrX 142199940 142200749 -24449547 + Lx7 LINE L1 6283 7107 -589 3 1669 460 259 63 49 chrX 142200752 142200793 -24449503 - Zaphod DNA Tip100 -134 3897 3859 3 1669 1042 130 10 42 chrX 142200793 142200986 -24449310 + B2_Mm2 SINE B2 1 187 -8 3 1669 460 259 63 49 chrX 142200986 142201126 -24449170 - Zaphod DNA Tip100 -173 3858 3722 3 1669 2653 132 64 11 chrX 142201126 142201577 -24448719 + MT2C_Mm LTR ERVL 1 475 0 3 1669 460 259 63 49 chrX 142201577 142201678 -24448618 - Zaphod DNA Tip100 -310 3721 3610 3 1669 31 96 0 0 chrX 142201721 142201815 -24448481 + AT_rich Low_complexity Low_complexity 1 94 0 3 1669 3328 258 78 84 chrX 142201886 142204097 -24446199 - Lx8 LINE L1 0 7696 5956 3 1669 255 61 0 0 chrX 142204110 142204143 -24446153 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 3 1669 236 275 157 26 chrX 142204635 142204788 -24445508 + L1M5 LINE L1 4651 4823 -1323 3 1669 485 268 37 31 chrX 142204901 142205063 -24445233 + RSINE1 SINE B4 3 165 0 3 1669 192 149 0 0 chrX 142205066 142205113 -24445183 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1669 351 262 86 18 chrX 142205131 142205294 -24445002 - L1MA8 LINE L1 -23 6268 6095 3 1669 26 0 0 0 chrX 142205926 142205952 -24444344 + AT_rich Low_complexity Low_complexity 1 26 0 3 1669 539 269 22 50 chrX 142206180 142206360 -24443936 - B3A SINE B2 0 198 24 3 1669 427 290 72 18 chrX 142206384 142206605 -24443691 - L1MA8 LINE L1 -703 5594 5362 3 1669 1374 304 88 8 chrX 142206646 142206930 -24443366 - L1MA8 LINE L1 -869 5274 4980 3 1669 450 0 0 0 chrX 142206930 142206980 -24443316 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1669 1374 304 88 8 chrX 142206980 142207547 -24442749 - L1MA8 LINE L1 -1164 4979 4356 3 1669 648 287 20 72 chrX 142207585 142207615 -24442681 - B3 SINE B2 -30 186 167 3 1669 315 0 0 0 chrX 142207615 142207650 -24442646 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1669 682 278 7 10 chrX 142207650 142207814 -24442482 - B3A SINE B2 -50 166 2 3 1669 742 261 25 0 chrX 142207879 142208078 -24442218 - B3 SINE B2 -11 205 2 3 1669 567 327 4 16 chrX 142208082 142208340 -24441956 - L1MA8 LINE L1 -1847 4293 4039 3 1669 278 301 12 12 chrX 142208579 142208663 -24441633 - PB1D10 SINE Alu -23 94 11 4 1669 261 0 0 0 chrX 142209171 142209200 -24441096 + (GAAAA)n Simple_repeat Simple_repeat 1 29 0 4 1669 180 111 0 0 chrX 142209326 142209353 -24440943 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 4 1669 299 23 0 44 chrX 142209660 142209705 -24440591 + (TCTCTG)n Simple_repeat Simple_repeat 6 48 0 4 1669 352 356 49 15 chrX 142209911 142210116 -24440180 - MIR SINE MIR -6 256 45 4 1669 432 300 93 48 chrX 142210401 142210742 -24439554 + Lx7 LINE L1 7128 7470 -3 4 1669 239 133 0 22 chrX 142211192 142211238 -24439058 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 4 208 18238 45 6 3 chrX 142211241 142214216 -24436080 - L1Md_F2 LINE L1 0 6582 3605 4 1670 3830 144 54 3 chrX 142214218 142214884 -24435412 + Lx5 LINE L1 5043 5742 -135 4 1670 38501 5 0 0 chrX 142214888 142220034 -24430262 + L1Md_A LINE L1 440 5586 -297 4 1670 9013 3 0 0 chrX 142220034 142221030 -24429266 + L1Md_A LINE L1 5587 6582 0 4 1670 1135 118 42 79 chrX 142221030 142221221 -24429075 + Lx5 LINE L1 5738 5928 -1122 4 1670 1035 295 120 36 chrX 142221262 142221919 -24428377 - Lx9 LINE L1 -5 7639 6928 4 1670 1399 329 27 0 chrX 142221932 142222406 -24427890 + Lx8 LINE L1 6787 7273 -200 4 1670 29 60 0 0 chrX 142222874 142222924 -24427372 + AT_rich Low_complexity Low_complexity 1 50 0 4 1670 293 326 87 84 chrX 142223093 142223448 -24426848 - Tigger15a DNA TcMar -97 618 263 4 1670 455 252 0 17 chrX 142224535 142224652 -24425644 + Lx7 LINE L1 7578 7692 -4 4 1670 1050 208 134 21 chrX 142224724 142225014 -24425282 + Lx9 LINE L1 6761 7083 -561 4 1670 1035 66 0 0 chrX 142225010 142225147 -24425149 - L1_Mm LINE L1 -1322 4561 4425 4 1670 254 372 3 10 chrX 142225210 142225361 -24424935 - Lx9 LINE L1 -274 7370 7110 4 1670 21 36 0 0 chrX 142227722 142227750 -24422546 + AT_rich Low_complexity Low_complexity 1 28 0 4 1670 237 175 0 0 chrX 142227943 142227983 -24422313 + RSINE1 SINE B4 83 122 -43 4 1670 7831 50 1 1 chrX 142228069 142229035 -24421261 + L1Md_F2 LINE L1 5606 6571 -11 4 1670 189 375 50 50 chrX 142229190 142229350 -24420946 - L2c LINE L2 -32 3355 3196 4 1670 1051 200 52 0 chrX 142229382 142229592 -24420704 + URR1B DNA MER1_type 1 221 -4 4 1670 3092 36 8 13 chrX 142229592 142229982 -24420314 + L1Md_F3 LINE L1 6195 6582 -2 4 1670 800 280 28 4 chrX 142230165 142230416 -24419880 + L1M2 LINE L1 5461 5717 -595 4 1670 2675 84 7 62 chrX 142230690 142231123 -24419173 - BGLII LTR ERVK -12 409 1 4 1670 3556 101 52 2 chrX 142231187 142231742 -24418554 + Lx LINE L1 6070 6652 -2 4 1670 213 310 90 51 chrX 142232482 142232595 -24417701 - PB1D10 SINE Alu -7 110 1 4 1670 16968 204 61 47 chrX 142233070 142234085 -24416211 + Lx5 LINE L1 916 2057 -3823 4 1670 480 35 0 0 chrX 142234085 142234143 -24416153 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 1670 16968 200 72 51 chrX 142234143 142234963 -24415333 + Lx5 LINE L1 2058 2865 -3015 4 1670 932 109 13 0 chrX 142234963 142235119 -24415177 + (GAAA)n Simple_repeat Simple_repeat 3 160 0 4 1670 16968 198 72 42 chrX 142235119 142235484 -24414812 + Lx5 LINE L1 2866 3247 -3803 4 1670 966 34 0 20 chrX 142235484 142235636 -24414660 + RMER17B LTR ERVK 312 460 -498 4 1670 16968 198 72 42 chrX 142235636 142239258 -24411038 + Lx5 LINE L1 3248 7048 -2 4 1670 447 312 35 0 chrX 142239594 142239738 -24410558 - MLT1B LTR MaLR 0 390 242 4 1670 448 337 68 19 chrX 142239832 142240095 -24410201 - L1M4 LINE L1 -5922 620 345 4 1670 263 209 0 29 chrX 142240584 142240653 -24409643 - Lx9 LINE L1 -15 7629 7563 4 1670 333 0 0 0 chrX 142241962 142241999 -24408297 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 1670 326 326 71 0 chrX 142242189 142242330 -24407966 - Lx8 LINE L1 -440 7033 6883 4 1670 261 316 142 23 chrX 142242408 142242754 -24407542 - L1MEg LINE L1 -3486 2660 2274 4 1670 277 325 68 36 chrX 142243302 142243580 -24406716 - L1MEg LINE L1 -4518 1724 1438 4 1670 477 275 7 72 chrX 142245219 142245372 -24404924 - B1F2 SINE Alu -1 148 6 4 1670 613 256 135 10 chrX 142247931 142248064 -24402232 - Lx9 LINE L1 -2 7642 7477 4 1670 333 0 0 0 chrX 142248064 142248101 -24402195 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 1670 613 256 135 10 chrX 142248101 142248255 -24402041 - Lx9 LINE L1 -168 7476 7319 4 1670 1518 250 33 40 chrX 142248245 142248695 -24401601 + Lx9 LINE L1 6887 7333 -311 4 1670 236 253 161 21 chrX 142249129 142249222 -24401074 - PB1D10 SINE Alu -3 114 9 4 1670 4831 132 12 3 chrX 142249403 142250133 -24400163 - RMER19A LTR ERVK 0 737 1 4 1670 238 360 35 0 chrX 142250224 142250310 -24399986 - Cheshire DNA MER1_type -2175 245 157 4 1670 22 70 0 0 chrX 142251015 142251058 -24399238 + AT_rich Low_complexity Low_complexity 1 43 0 4 1670 312 325 25 25 chrX 142251733 142251853 -24398443 + MER68 LTR ERVL 435 554 -9 4 1670 21 36 0 0 chrX 142251856 142251884 -24398412 + AT_rich Low_complexity Low_complexity 1 28 0 4 1670 220 252 18 9 chrX 142251893 142252005 -24398291 + (TCTA)n Simple_repeat Simple_repeat 2 114 0 4 1670 1632 179 44 83 chrX 142252016 142252376 -24397920 - ORR1B1 LTR MaLR -8 386 41 4 1670 531 0 0 0 chrX 142252377 142252436 -24397860 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 4 1670 1911 132 120 16 chrX 142253041 142253417 -24396879 - RLTR9F LTR ERVK 0 415 1 4 1670 23 0 0 0 chrX 142253433 142253456 -24396840 + AT_rich Low_complexity Low_complexity 1 23 0 4 1670 1295 51 6 22 chrX 142253456 142253635 -24396661 - L1Md_F2 LINE L1 -14 6568 6393 4 1670 996 288 80 35 chrX 142254795 142255086 -24395210 - ORR1D2 LTR MaLR -4 366 66 4 1670 1438 249 33 3 chrX 142255086 142255449 -24394847 - ORR1D1 LTR MaLR 0 374 1 4 1670 996 288 80 35 chrX 142255449 142255496 -24394800 - ORR1D2 LTR MaLR -305 65 14 4 1670 398 335 90 111 chrX 142255632 142255788 -24394508 + MLT2B3 LTR ERVL 4 167 -387 4 1670 816 265 142 21 chrX 142255788 142256162 -24394134 - MTD LTR MaLR 0 419 1 4 1670 398 335 90 111 chrX 142256162 142256428 -24393868 + MLT2B3 LTR ERVL 168 417 -137 4 1670 789 228 43 6 chrX 142256444 142256628 -24393668 + RMER6D LTR ERVK 551 720 0 4 1670 5843 67 40 4 chrX 142256866 142257644 -24392652 - RLTR13D1 LTR ERVK 0 806 1 4 1670 531 0 0 0 chrX 142258894 142258953 -24391343 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 1670 1094 279 27 44 chrX 142259111 142259516 -24390780 - L1_Mur3 LINE L1 -3136 2744 2347 4 1670 607 335 32 35 chrX 142259544 142259884 -24390412 + Lx8 LINE L1 6799 7137 -336 4 1670 8420 97 3 25 chrX 142259916 142261171 -24389125 - Lx3_Mus LINE L1 0 7009 5783 4 1670 5138 45 5 5 chrX 142261194 142261839 -24388457 - L1Md_F3 LINE L1 -12 6572 5928 4 1670 11814 88 16 43 chrX 142261839 142262871 -24387425 - L1_Mur1 LINE L1 -92 5794 4782 4 1670 7000 35 1 0 chrX 142262871 142263705 -24386591 - L1Md_A LINE L1 0 6582 5748 4 1670 11814 88 16 43 chrX 142263705 142264096 -24386200 - L1_Mur1 LINE L1 -1105 4781 4423 4 1670 2437 115 43 10 chrX 142264096 142264492 -24385804 + RLTR9E LTR ERVK 1 409 0 4 1670 11814 88 16 43 chrX 142264492 142264876 -24385420 - L1_Mur1 LINE L1 -1464 4422 4035 4 1670 242 336 17 26 chrX 142264953 142265069 -24385227 + Lx8 LINE L1 7216 7330 -143 4 1670 8812 154 29 206 chrX 142265436 142268809 -24381487 - Lx5 LINE L1 -49 7001 4577 4 1670 339 25 0 0 chrX 142268809 142268849 -24381447 + (TAAAA)n Simple_repeat Simple_repeat 2 41 0 4 1670 8812 128 18 293 chrX 142268849 142270076 -24380220 - Lx5 LINE L1 -1301 4576 3323 4 1670 3221 174 7 9 chrX 142270074 142270653 -24379643 - Lx5 LINE L1 -5967 1119 542 4 1670 1244 131 9 5 chrX 142271184 142271398 -24378898 + L1_Mur2 LINE L1 531 745 -5967 4 1670 310 351 29 8 chrX 142271404 142271525 -24378771 - B3A SINE B2 -98 118 1 4 1670 1584 132 34 54 chrX 142271571 142271867 -24378429 - Lx LINE L1 -6 6648 6359 4 1670 1453 311 28 20 chrX 142271875 142272422 -24377874 + Lx6 LINE L1 6489 7400 -60 4 1670 266 293 37 0 chrX 142272554 142272636 -24377660 - ID_B1 SINE B4 0 224 140 4 1670 475 309 26 22 chrX 142272642 142272870 -24377426 - L1M2 LINE L1 -505 5786 5558 4 1670 315 71 0 0 chrX 142273327 142273369 -24376927 + (TCTG)n Simple_repeat Simple_repeat 2 43 0 4 1670 567 29 0 0 chrX 142273369 142273437 -24376859 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 4 1670 229 228 49 37 chrX 142273467 142273549 -24376747 - MLT2B4 LTR ERVL -41 515 433 4 1670 384 338 35 35 chrX 142273656 142273800 -24376496 + RSINE1 SINE B4 21 164 -1 4 1670 22 35 0 0 chrX 142273820 142273849 -24376447 + AT_rich Low_complexity Low_complexity 1 29 0 4 1670 28 48 0 0 chrX 142274750 142274792 -24375504 + AT_rich Low_complexity Low_complexity 1 42 0 4 1670 1636 299 146 30 chrX 142274916 142275288 -24375008 - Lx8 LINE L1 -151 7322 6922 4 1670 2081 112 45 6 chrX 142275288 142275620 -24374676 - Lx LINE L1 -6 6648 6304 4 1670 1636 299 146 30 chrX 142275620 142276047 -24374249 - Lx8 LINE L1 -552 6921 6431 4 1670 6404 78 9 2 chrX 142276160 142277009 -24373287 - L1_Mus1 LINE L1 0 6567 5713 4 1670 6308 67 0 30 chrX 142277008 142277062 -24373234 + L1_Mm LINE L1 4883 4934 -949 4 1670 2878 37 6 3 chrX 142277062 142277417 -24372879 - L1Md_F3 LINE L1 -1 6583 6228 4 1670 6308 67 0 30 chrX 142277417 142278220 -24372076 + L1_Mm LINE L1 4935 5714 -169 4 1670 360 376 10 53 chrX 142278506 142278714 -24371582 + RMER30 DNA MER1_type 2 200 -2 4 1670 25 0 0 0 chrX 142279614 142279639 -24370657 + AT_rich Low_complexity Low_complexity 1 25 0 4 1670 1069 289 75 11 chrX 142280976 142281347 -24368949 - Lx8 LINE L1 -866 6607 6213 4 1670 28 0 0 0 chrX 142281695 142281723 -24368573 + AT_rich Low_complexity Low_complexity 1 28 0 4 1670 248 354 33 30 chrX 142281893 142282225 -24368071 + L1M2 LINE L1 5054 5386 -757 4 1670 1461 174 64 59 chrX 142282963 142283371 -24366925 + RMER17C LTR ERVK 1 410 0 4 1670 731 209 68 23 chrX 142283374 142283550 -24366746 + RMER17C-int LTR ERVK 4 187 -3051 4 1670 402 74 0 0 chrX 142283961 142284015 -24366281 + (TC)n Simple_repeat Simple_repeat 2 55 0 4 1670 818 171 257 21 chrX 142284768 142285158 -24365138 + RMER17C-int LTR ERVK 1508 1988 -1250 4 1670 770 141 35 7 chrX 142285162 142285305 -24364991 + RMER17C-int LTR ERVK 2191 2337 -901 4 1670 3249 122 149 18 chrX 142285306 142285930 -24364366 + RMER17C-int LTR ERVK 2533 3238 0 4 1670 1594 135 87 19 chrX 142285933 142286349 -24363947 + RMER17C LTR ERVK 16 439 -519 4 1670 476 338 0 0 chrX 142287379 142287512 -24362784 + ID_B1 SINE B4 91 223 -1 4 1670 4511 61 8 7 chrX 142287641 142288234 -24362062 - L1Md_F2 LINE L1 -2 6580 5987 4 1670 452 269 0 55 chrX 142288238 142288348 -24361948 - Lx8 LINE L1 -136 7337 7234 4 1670 697 335 72 8 chrX 142288475 142288740 -24361556 - Lx8 LINE L1 -267 7206 6925 4 1670 1749 293 17 4 chrX 142288770 142289246 -24361050 - Lx8 LINE L1 -724 6749 6268 4 1670 1095 331 57 22 chrX 142289496 142290163 -24360133 - L1MC3 LINE L1 -1217 6568 5879 4 1670 338 333 9 9 chrX 142290393 142290502 -24359794 - B1F2 SINE Alu -9 140 32 4 1670 242 229 64 45 chrX 142290503 142290613 -24359683 - L1M2 LINE L1 -418 5885 5774 4 1670 387 0 0 0 chrX 142290669 142290712 -24359584 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 1670 549 222 7 0 chrX 142290787 142290922 -24359374 - L1M2 LINE L1 -831 5469 5334 4 1670 227 188 30 30 chrX 142290942 142291008 -24359288 + (CATATA)n Simple_repeat Simple_repeat 4 69 0 5 1670 201 196 0 0 chrX 142291056 142291102 -24359194 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 1670 288 297 75 32 chrX 142291144 142291238 -24359058 - MER5A1 DNA MER1_type -6 160 63 5 1670 640 231 92 0 chrX 142291260 142291390 -24358906 + B1_Mur2 SINE Alu 2 143 -6 5 1670 390 390 92 11 chrX 142291509 142291857 -24358439 - Lx8 LINE L1 -147 7326 6951 5 1670 1541 259 36 34 chrX 142291882 142292556 -24357740 - Lx8 LINE L1 -1743 5953 5281 4 1670 1070 259 128 31 chrX 142292559 142292982 -24357314 - L1_Rod LINE L1 -787 5060 4597 5 1670 1713 198 39 3 chrX 142293249 142293608 -24356688 + ORR1D1 LTR MaLR 1 372 -2 5 1670 188 111 28 0 chrX 142293795 142293831 -24356465 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 5 1670 348 82 20 0 chrX 142294166 142294215 -24356081 - ORR1D1 LTR MaLR 0 374 325 5 1670 946 92 7 19 chrX 142294215 142294370 -24355926 - L1Md_F2 LINE L1 -2 6580 6428 5 1670 230 190 33 49 chrX 142294370 142294381 -24355915 - ORR1D1 LTR MaLR -49 330 320 5 1670 2398 60 16 0 chrX 142294381 142294697 -24355599 + L1_Mm LINE L1 4292 4612 -1271 5 1670 303 194 14 0 chrX 142294685 142294757 -24355539 - L1_Mur2 LINE L1 -5979 733 661 5 1670 2649 222 78 7 chrX 142294756 142295324 -24354972 - RMER1B Other Other -2 1064 457 5 1670 5529 191 61 8 chrX 142295326 142295766 -24354530 - L1_Mur3 LINE L1 -3339 2541 2070 5 1670 216 0 0 0 chrX 142295766 142295790 -24354506 + (TTG)n Simple_repeat Simple_repeat 1 24 0 5 1670 5529 205 55 54 chrX 142295790 142297503 -24352793 - L1_Mur3 LINE L1 -3811 2069 373 5 1670 238 312 0 25 chrX 142297659 142297738 -24352558 - Lx8 LINE L1 -115 7358 7282 5 1670 201 178 0 0 chrX 142297840 142297885 -24352411 + T-rich Low_complexity Low_complexity 1 45 0 5 1670 424 32 0 0 chrX 142297901 142297964 -24352332 - L1_Mus3 LINE L1 -2 6636 6574 5 1670 447 268 178 18 chrX 142298006 142298572 -24351724 - L1M4 LINE L1 -2563 3583 2927 5 1670 1361 175 78 7 chrX 142298941 142299212 -24351084 - L1_Mus4 LINE L1 -6 6630 6341 5 1670 1093 109 29 6 chrX 142299371 142299546 -24350750 - L1_Mur2 LINE L1 -923 4954 4776 5 1670 1873 214 18 10 chrX 142299545 142299942 -24350354 + RMER1B Other Other 665 1064 -2 5 1670 5860 190 29 66 chrX 142299941 142301592 -24348704 + L1_Mur2 LINE L1 1035 2636 -3244 5 1670 3135 189 15 23 chrX 142301662 142302267 -24348029 + Lx5 LINE L1 6189 6788 -262 5 1670 1463 216 33 14 chrX 142302263 142302629 -24347667 + L1_Mur3 LINE L1 5508 5880 0 5 1670 1650 266 26 17 chrX 142302640 142302685 -24347611 + Lx6 LINE L1 6848 6892 -568 5 1670 828 92 0 0 chrX 142302685 142302804 -24347492 + (CA)n Simple_repeat Simple_repeat 2 120 0 5 1670 1650 266 26 17 chrX 142302804 142303178 -24347118 + Lx6 LINE L1 6893 7271 -189 5 1670 7921 46 2 11 chrX 142303176 142304235 -24346061 - L1Md_F2 LINE L1 -2 6580 5545 5 1670 1493 59 0 16 chrX 142304235 142304424 -24345872 - B2_Mm1a SINE B2 -7 186 1 5 1670 7031 29 1 27 chrX 142304424 142304938 -24345358 - L1Md_F2 LINE L1 -339 5544 5031 5 1670 5449 34 22 30 chrX 142304931 142305881 -24344415 + L1Md_A LINE L1 984 1904 -3979 5 1670 594 258 77 0 chrX 142305876 142306058 -24344238 + Lx6 LINE L1 7265 7460 0 5 1670 1004 289 112 14 chrX 142306427 142307055 -24343241 + L1M4 LINE L1 4472 5160 -986 5 1670 319 350 17 8 chrX 142307081 142307199 -24343097 - B4 SINE B4 -157 135 17 5 1670 22 35 0 0 chrX 142307334 142307363 -24342933 + AT_rich Low_complexity Low_complexity 1 29 0 5 1670 685 302 0 0 chrX 142307393 142307555 -24342741 + RSINE1 SINE B4 3 164 -1 5 1670 727 215 74 31 chrX 142308228 142308391 -24341905 - B3 SINE B2 -27 189 20 5 1670 1407 99 9 22 chrX 142308518 142308728 -24341568 + L1_Mus3 LINE L1 6398 6605 -33 5 1670 311 156 78 0 chrX 142308728 142308805 -24341491 + L1Md_F3 LINE L1 6501 6583 -1 5 1670 1407 99 9 22 chrX 142308805 142308820 -24341476 + L1_Mus3 LINE L1 6606 6620 -18 5 1670 180 111 0 0 chrX 142308993 142309020 -24341276 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1670 238 323 10 50 chrX 142309219 142309320 -24340976 - B1_Mur4 SINE Alu -13 137 41 5 1670 542 75 0 12 chrX 142309494 142309575 -24340721 + (TA)n Simple_repeat Simple_repeat 2 81 0 5 1670 363 44 0 0 chrX 142310202 142310247 -24340049 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1670 414 0 0 0 chrX 142310247 142310292 -24340004 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 1670 511 291 44 31 chrX 142310292 142310497 -24339799 + MT2A LTR ERVL 347 547 -54 5 1670 456 91 0 0 chrX 142310497 142310563 -24339733 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 1670 511 273 45 0 chrX 142310563 142310617 -24339679 + MT2A LTR ERVL 472 529 -4 5 1670 559 313 30 53 chrX 142310618 142310881 -24339415 + Lx9 LINE L1 6920 7176 -468 5 1670 3729 121 27 5 chrX 142312407 142312999 -24337297 - Lx3A LINE L1 -527 6454 5850 5 1670 3087 149 2 13 chrX 142312999 142313522 -24336774 + Lx3A LINE L1 6462 6978 -3 5 1670 3801 49 0 4 chrX 142313521 142313996 -24336300 + L1Md_F2 LINE L1 6110 6582 0 5 1670 26 0 0 0 chrX 142313997 142314023 -24336273 + AT_rich Low_complexity Low_complexity 1 26 0 5 1670 23748 84 6 13 chrX 142314096 142318154 -24332142 - L1Md_F2 LINE L1 -2 6580 2552 5 1670 1050 95 0 7 chrX 142318177 142318325 -24331971 - B1_Mus2 SINE Alu 0 147 1 5 1670 303 333 23 58 chrX 142318580 142318752 -24331544 - HAL1 LINE L1 -135 2372 2207 5 1670 964 112 37 0 chrX 142319777 142320048 -24330248 + (TCTA)n Simple_repeat Simple_repeat 1 281 0 5 1670 206 149 42 21 chrX 142320404 142320452 -24329844 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 1670 23 0 0 0 chrX 142322589 142322612 -24327684 + AT_rich Low_complexity Low_complexity 1 23 0 5 1670 252 86 0 0 chrX 142322922 142322957 -24327339 + (T)n Simple_repeat Simple_repeat 1 35 0 5 1670 5430 57 4 1 chrX 142322974 142323664 -24326632 - L1Md_F2 LINE L1 -5 6577 5886 5 1670 923 154 0 0 chrX 142323973 142324129 -24326167 - L1_Mur1 LINE L1 -979 4907 4752 5 1670 8930 112 10 23 chrX 142324125 142325699 -24324597 + Lx3A LINE L1 5407 6971 -10 5 1670 2142 154 62 20 chrX 142326615 142327019 -24323277 - MTC LTR MaLR 0 421 1 5 1670 214 301 296 17 chrX 142327235 142327414 -24322882 + MIR SINE MIR 11 239 -23 5 1670 1125 112 0 0 chrX 142327656 142327816 -24322480 - Lx LINE L1 -637 6017 5858 5 1670 4147 110 3 8 chrX 142327907 142328520 -24321776 + Lx LINE L1 6045 6654 0 5 1670 258 106 0 0 chrX 142329207 142329254 -24321042 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1670 668 340 74 7 chrX 142329556 142329826 -24320470 - B4 SINE B4 0 292 5 5 1670 180 0 0 0 chrX 142330022 142330042 -24320254 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 1670 247 346 80 16 chrX 142330192 142330380 -24319916 - L2 LINE L2 -803 2616 2417 5 1670 343 273 65 0 chrX 142330800 142330939 -24319357 - L1MB4 LINE L1 -1 6179 6032 5 1670 480 226 64 8 chrX 142331092 142331217 -24319079 - MLT1E3 LTR MaLR -8 616 485 5 1670 21 57 0 0 chrX 142331604 142331639 -24318657 + AT_rich Low_complexity Low_complexity 1 35 0 5 1670 249 279 73 0 chrX 142332250 142332318 -24317978 + B1F SINE Alu 36 108 -41 5 1670 235 237 0 13 chrX 142332339 142332416 -24317880 + A-rich Low_complexity Low_complexity 3 78 0 5 1670 1273 302 106 2 chrX 142332639 142333124 -24317172 + Lx5 LINE L1 6503 7434 -26 5 1670 262 354 0 17 chrX 142333375 142333493 -24316803 + Lx7 LINE L1 6952 7067 -629 5 1670 244 132 29 14 chrX 142333519 142333588 -24316708 + (CAAA)n Simple_repeat Simple_repeat 2 71 0 5 1670 386 330 85 32 chrX 142333648 142333930 -24316366 + Lx8 LINE L1 7174 7470 -3 5 1670 24 0 0 0 chrX 142335222 142335246 -24315050 + AT_rich Low_complexity Low_complexity 1 24 0 5 1670 505 246 34 0 chrX 142335350 142335468 -24314828 - MLT1A1 LTR MaLR 0 408 287 5 1670 37291 48 4 6 chrX 142336211 142342083 -24308213 - L1Md_T LINE L1 0 6997 1170 5 1670 5205 169 21 27 chrX 142342089 142343404 -24306892 - L1Md_T LINE L1 -5411 1205 99 5 1670 23 33 0 0 chrX 142343405 142343435 -24306861 + AT_rich Low_complexity Low_complexity 1 30 0 5 1670 234 0 0 0 chrX 142343708 142343734 -24306562 + (ACATG)n Simple_repeat Simple_repeat 2 27 0 5 1670 320 388 31 8 chrX 142343735 142343865 -24306431 + RSINE1 SINE B4 27 159 -6 5 1671 3066 47 15 10 chrX 142344426 142344817 -24305479 - L1_Mus1 LINE L1 0 6567 6175 5 1671 2633 84 10 0 chrX 142344828 142345211 -24305085 + L1_Mus1 LINE L1 5587 5973 -594 5 1671 27575 105 39 5 chrX 142345408 142350765 -24299531 + L1Md_F2 LINE L1 66 5586 -297 5 1671 6959 95 5 10 chrX 142350765 142351754 -24298542 + L1Md_F2 LINE L1 5587 6570 -12 5 1671 230 291 49 37 chrX 142351972 142352054 -24298242 + PB1D9 SINE Alu 37 119 -1 5 1671 236 327 159 71 chrX 142352122 142352530 -24297766 - Lx8 LINE L1 -2 7471 7028 5 1671 1608 214 68 111 chrX 142352578 142353139 -24297157 + Lx7 LINE L1 7158 7694 -2 5 1671 210 37 0 0 chrX 142353942 142353969 -24296327 + (ATG)n Simple_repeat Simple_repeat 1 27 0 5 1671 1268 79 6 0 chrX 142353989 142354167 -24296129 + (GAA)n Simple_repeat Simple_repeat 1 179 0 5 1671 233 265 0 0 chrX 142354806 142354874 -24295422 - L1MA5 LINE L1 -23 6277 6210 5 1671 239 271 75 20 chrX 142355018 142355165 -24295131 - Lx8 LINE L1 -18 7455 7301 5 1671 1308 284 100 8 chrX 142355180 142355659 -24294637 - Lx8 LINE L1 -333 7140 6618 5 1671 286 295 93 46 chrX 142355695 142356221 -24294075 - L1MA5 LINE L1 -415 5885 5300 5 1671 343 272 130 23 chrX 142356237 142356414 -24293882 - L1MA5 LINE L1 -864 5279 5084 5 1671 6981 70 8 1 chrX 142356560 142357874 -24292422 - L1Md_F2 LINE L1 -6 6576 5252 5 1671 2553 106 23 0 chrX 142358343 142358739 -24291557 - L1Md_F2 LINE L1 -616 5267 4863 5 1671 8298 55 1 0 chrX 142358739 142360509 -24289787 + L1Md_F2 LINE L1 4764 6534 -48 5 1671 25800 77 2 6 chrX 142360506 142364831 -24285465 - L1Md_F2 LINE L1 -1066 4817 538 5 1671 2925 24 0 3 chrX 142364831 142365169 -24285127 + IAPLTR1a_Mm LTR ERVK 1 337 0 5 1671 53001 23 13 6 chrX 142365169 142371603 -24278693 + IAPEz-int LTR ERVK 8 6481 0 5 1671 2925 24 0 3 chrX 142371603 142371941 -24278355 + IAPLTR1a_Mm LTR ERVK 1 337 0 5 1671 505 148 0 0 chrX 142371941 142372029 -24278267 - L1VL1 LINE L1 -6310 112 25 5 1671 369 0 0 0 chrX 142372062 142372103 -24278193 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1671 306 0 0 0 chrX 142372106 142372140 -24278156 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1671 4391 189 61 19 chrX 142372596 142373608 -24276688 - Lx4B LINE L1 -4 7054 6000 5 1671 754 162 120 11 chrX 142373604 142373779 -24276517 - Lx4A LINE L1 -332 6726 6533 5 1671 287 95 0 0 chrX 142373800 142373842 -24276454 - Lx4B LINE L1 -1133 5925 5884 5 1671 312 94 0 0 chrX 142374053 142374106 -24276190 + (A)n Simple_repeat Simple_repeat 1 53 0 5 1671 532 296 43 7 chrX 142374544 142374798 -24275498 - Lx7 LINE L1 -1546 5927 5667 6 1671 225 180 0 0 chrX 142375145 142375195 -24275101 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 1671 268 254 0 0 chrX 142376268 142376323 -24273973 - B1_Mus2 SINE Alu -61 86 32 6 1671 5137 76 6 1 chrX 142376324 142377010 -24273286 + L1_Mus1 LINE L1 5874 6562 -5 6 1671 186 103 0 0 chrX 142377024 142377053 -24273243 + (TG)n Simple_repeat Simple_repeat 1 29 0 6 1671 437 33 49 0 chrX 142377053 142377114 -24273182 + (GGGAGA)n Simple_repeat Simple_repeat 3 66 0 6 1671 195 100 0 0 chrX 142377114 142377144 -24273152 + (CAGAGA)n Simple_repeat Simple_repeat 1 30 0 6 1671 359 322 16 25 chrX 142377145 142377266 -24273030 - RSINE1 SINE B4 -26 139 20 6 1671 30710 78 1 21 chrX 142377267 142378344 -24271952 - L1Md_F2 LINE L1 0 6582 5535 6 1671 1988 144 10 0 chrX 142378344 142378650 -24271646 - RLTR27 LTR ERVK 0 309 1 6 1671 30710 119 32 15 chrX 142378650 142383842 -24266454 - L1Md_F2 LINE L1 -349 5534 240 6 1671 1705 166 27 56 chrX 142384154 142384530 -24265766 + Lx3C LINE L1 6610 6974 -2 6 1671 708 257 23 11 chrX 142384791 142384968 -24265328 - B3A SINE B2 -18 180 2 6 1671 21 0 0 0 chrX 142384982 142385003 -24265293 + AT_rich Low_complexity Low_complexity 1 21 0 6 1671 411 365 6 25 chrX 142385468 142385631 -24264665 - RSINE1 SINE B4 0 165 6 6 1671 4221 114 2 2 chrX 142385648 142386291 -24264005 - L1_Mus1 LINE L1 -203 5680 5038 6 1671 1140 46 7 0 chrX 142386283 142386436 -24263860 + L1_Mus1 LINE L1 5676 5829 -738 6 1671 3315 79 2 2 chrX 142386436 142386879 -24263417 + L1_Mus1 LINE L1 6124 6566 -1 6 1671 413 306 45 120 chrX 142387228 142387652 -24262644 + Charlie5 DNA MER1_type 5 396 -2228 6 1671 792 294 35 19 chrX 142387831 142388246 -24262050 + Lx5 LINE L1 6168 6804 -656 6 1671 495 0 0 0 chrX 142388276 142388331 -24261965 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 6 1671 274 241 19 164 chrX 142388346 142388366 -24261930 - L1Md_F3 LINE L1 -9 6575 6553 6 1671 1973 62 4 4 chrX 142388366 142388623 -24261673 - L1_Mus1 LINE L1 0 6567 6311 6 1671 929 123 13 13 chrX 142388623 142388780 -24261516 - L1_Mus3 LINE L1 -22 6616 6460 6 1671 1066 106 33 0 chrX 142388764 142388915 -24261381 + L1_Mus3 LINE L1 6306 6461 -177 6 1671 1771 296 16 26 chrX 142388918 142389411 -24260885 + Lx5 LINE L1 6488 6975 -75 6 1671 385 279 15 8 chrX 142389401 142389531 -24260765 + Lx9 LINE L1 7343 7473 -171 6 1671 29 47 0 0 chrX 142389624 142389667 -24260629 + AT_rich Low_complexity Low_complexity 1 43 0 6 1671 264 313 41 18 chrX 142389667 142389836 -24260460 + Charlie5 DNA MER1_type 782 954 -1670 6 1671 915 223 116 5 chrX 142389836 142390043 -24260253 - Lx9 LINE L1 -1046 6598 6369 6 1671 483 33 0 0 chrX 142390043 142390104 -24260192 + (TC)n Simple_repeat Simple_repeat 2 62 0 6 1671 308 148 0 16 chrX 142390105 142390167 -24260129 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 1671 2109 236 100 19 chrX 142390216 142390808 -24259488 + Lx9 LINE L1 6608 7247 -397 6 1671 241 231 121 0 chrX 142391392 142391483 -24258813 - L1ME2z LINE L1 -173 6271 6170 6 1671 325 55 40 27 chrX 142391590 142391665 -24258631 + (TA)n Simple_repeat Simple_repeat 2 77 0 6 1671 423 204 18 0 chrX 142392330 142392443 -24257853 + Lx9 LINE L1 7523 7637 -7 6 1671 465 62 0 0 chrX 142392709 142392774 -24257522 + (CA)n Simple_repeat Simple_repeat 2 66 0 6 1671 23 0 0 0 chrX 142392831 142392854 -24257442 + AT_rich Low_complexity Low_complexity 1 23 0 6 1671 489 34 0 0 chrX 142393955 142394014 -24256282 + (GA)n Simple_repeat Simple_repeat 1 59 0 6 1671 191 322 0 0 chrX 142394275 142394334 -24255962 - MIR SINE MIR -122 140 82 6 1671 974 296 72 9 chrX 142394587 142394935 -24255361 + ORR1D2 LTR MaLR 1 370 0 6 1671 303 122 0 0 chrX 142395052 142395101 -24255195 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1671 2210 209 50 23 chrX 142395231 142395793 -24254503 + Lx6 LINE L1 5599 6175 -1285 6 1671 320 186 0 114 chrX 142395793 142395872 -24254424 + L1VL1 LINE L1 400 469 -6169 6 1671 12691 95 5 6 chrX 142395872 142398554 -24251742 + L1VL1 LINE L1 427 3107 -2776 6 1671 2461 88 9 3 chrX 142398555 142398896 -24251400 + L1_Mus1 LINE L1 6224 6566 -1 6 1671 4131 254 94 52 chrX 142398966 142399705 -24250591 + Lx6 LINE L1 6169 6882 -578 6 1671 686 44 11 0 chrX 142399705 142399795 -24250501 + (GA)n Simple_repeat Simple_repeat 2 92 0 6 1671 4131 254 94 52 chrX 142399795 142400294 -24250002 + Lx6 LINE L1 6883 7457 -3 6 1671 187 360 0 23 chrX 142400335 142400423 -24249873 - L2 LINE L2 -676 2743 2658 6 1671 5311 130 36 23 chrX 142401660 142402539 -24247757 + L1Md_F LINE L1 249 1139 -5380 6 1671 14926 209 8 144 chrX 142402508 142404922 -24245374 + L1Md_F2 LINE L1 1206 2994 -2886 6 1671 4751 70 0 0 chrX 142404922 142405532 -24244764 + L1Md_T LINE L1 5973 6582 0 6 1671 14926 209 8 144 chrX 142405532 142405563 -24244733 + L1Md_F2 LINE L1 2995 2995 -2885 6 1671 1463 53 0 0 chrX 142405563 142405753 -24244543 + L1Md_F3 LINE L1 6381 6570 -14 6 1671 18151 90 2 12 chrX 142405753 142408369 -24241927 + L1Md_F2 LINE L1 2995 5585 -298 6 1671 7648 66 0 14 chrX 142408370 142409373 -24240923 + L1Md_F2 LINE L1 5587 6575 -7 6 1671 193 29 59 0 chrX 142409815 142409849 -24240447 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 6 1671 2891 193 10 55 chrX 142409849 142410468 -24239828 - Lx2B LINE L1 -31 6969 6379 6 1671 21623 174 18 84 chrX 142410473 142411894 -24238402 - L1VL4 LINE L1 -6 5880 4457 6 1671 1069 91 0 0 chrX 142411894 142412037 -24238259 - B1_Mus1 SINE Alu -5 143 1 6 1671 21623 174 18 84 chrX 142412037 142413491 -24236805 - L1VL4 LINE L1 -1430 4456 3000 6 1671 1670 145 32 11 chrX 142413491 142413776 -24236520 - L1_Mus3 LINE L1 -7 6631 6341 6 1671 21623 184 21 67 chrX 142413776 142416685 -24233611 - L1VL4 LINE L1 -2887 2999 398 6 1671 7913 154 15 20 chrX 142416699 142418214 -24232082 - MusHAL1 LINE L1 -902 1810 304 6 1671 27 0 0 0 chrX 142419233 142419260 -24231036 + AT_rich Low_complexity Low_complexity 1 27 0 6 1671 204 40 0 0 chrX 142419270 142419295 -24231001 + (TC)n Simple_repeat Simple_repeat 2 26 0 6 1671 492 62 0 0 chrX 142419296 142419360 -24230936 + (TA)n Simple_repeat Simple_repeat 1 64 0 6 1671 2695 212 34 5 chrX 142419581 142420191 -24230105 - Lx9 LINE L1 -2 7642 7015 6 1671 638 286 25 50 chrX 142421037 142421239 -24229057 - B3A SINE B2 0 198 2 6 1671 195 42 0 0 chrX 142421407 142421431 -24228865 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 6 1671 894 297 64 72 chrX 142422813 142423172 -24227124 + ORR1E LTR MaLR 4 359 0 6 1671 4842 210 25 28 chrX 142423375 142423717 -24226579 + L1_Mur2 LINE L1 3285 3633 -2244 6 1671 3362 181 17 20 chrX 142423717 142424364 -24225932 + Lx4B LINE L1 6407 7051 -7 6 1671 4842 210 25 28 chrX 142424364 142425242 -24225054 + L1_Mur2 LINE L1 3634 4501 -1376 6 1671 348 0 0 0 chrX 142425242 142425282 -24225014 - MTB LTR MaLR 0 400 361 6 1671 4747 187 45 79 chrX 142425818 142426540 -24223756 + Lx5 LINE L1 4369 5134 -743 6 1671 3407 106 103 9 chrX 142426540 142427112 -24223184 + Lx3_Mus LINE L1 6379 7004 -5 6 1671 4747 187 45 79 chrX 142427112 142427406 -24222890 + Lx5 LINE L1 5135 5371 -506 6 1671 1455 6 0 0 chrX 142427406 142427570 -24222726 + (GAA)n Simple_repeat Simple_repeat 2 165 0 6 1671 4747 187 45 79 chrX 142427570 142427806 -24222490 + Lx5 LINE L1 5372 5580 -297 6 1671 8825 11 0 1 chrX 142427806 142428803 -24221493 + L1Md_A LINE L1 5587 6582 0 6 1671 1907 316 56 77 chrX 142429940 142431260 -24219036 + Lx5 LINE L1 5741 7032 -18 6 1671 23 0 0 0 chrX 142431617 142431640 -24218656 + AT_rich Low_complexity Low_complexity 1 23 0 6 1671 881 195 48 61 chrX 142431938 142432167 -24218129 + URR1A DNA MER1_type 1 226 0 6 1671 453 319 40 45 chrX 142432285 142432485 -24217811 - MT2A LTR ERVL -162 371 173 6 1671 780 314 33 23 chrX 142433068 142433374 -24216922 - Lx8 LINE L1 -968 6505 6197 6 1671 233 231 15 30 chrX 142433605 142433672 -24216624 - L1M LINE L1 -755 5425 5360 6 1671 337 304 69 69 chrX 142434155 142434388 -24215908 - L1MC3 LINE L1 -289 7496 7264 6 1671 462 322 101 8 chrX 142434533 142434790 -24215506 - L1MC3 LINE L1 -837 6948 6668 6 1671 22 0 0 0 chrX 142435076 142435098 -24215198 + AT_rich Low_complexity Low_complexity 1 22 0 6 1671 271 370 117 8 chrX 142435148 142435276 -24215020 + RSINE1 SINE B4 3 144 -21 6 1671 28 61 0 0 chrX 142435379 142435428 -24214868 + AT_rich Low_complexity Low_complexity 1 49 0 6 1671 1654 183 80 10 chrX 142435722 142436376 -24213920 + Lx5 LINE L1 889 1643 -4234 6 1671 5736 208 118 41 chrX 142436373 142438115 -24212181 + Lx5 LINE L1 5144 7050 0 6 1671 653 241 90 94 chrX 142438590 142438720 -24211576 - RLTR25B LTR ERVK 0 1028 894 6 1671 426 20 0 0 chrX 142438720 142438771 -24211525 + (TC)n Simple_repeat Simple_repeat 1 51 0 6 1671 653 241 90 94 chrX 142438771 142438928 -24211368 - RLTR25B LTR ERVK -135 893 742 6 1671 7423 118 39 5 chrX 142439194 142441191 -24209105 + Lx LINE L1 4584 6654 0 6 1671 1169 41 7 7 chrX 142441194 142441340 -24208956 + B1_Mus2 SINE Alu 2 147 0 6 1671 3719 185 25 44 chrX 142441459 142441633 -24208663 - RLTR25B LTR ERVK -268 760 586 6 1671 977 118 0 34 chrX 142441633 142441782 -24208514 + B1_Mus1 SINE Alu 2 145 -3 6 1671 3719 185 25 44 chrX 142441782 142442382 -24207914 - RLTR25B LTR ERVK -443 585 1 6 1671 389 265 26 0 chrX 142442765 142442882 -24207414 - Lx9 LINE L1 -9 7635 7516 6 1671 234 0 0 0 chrX 142442883 142442909 -24207387 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1671 1918 200 106 9 chrX 142442909 142443352 -24206944 - Lx9 LINE L1 -189 7455 6970 6 1671 185 0 40 0 chrX 142443682 142443707 -24206589 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 1671 486 0 0 0 chrX 142443726 142443780 -24206516 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 1671 263 196 0 0 chrX 142443960 142444011 -24206285 - MTEa LTR MaLR -323 56 6 6 1671 341 331 40 12 chrX 142444023 142444274 -24206022 + L1M4c LINE L1 1964 2221 -4163 6 1671 1863 304 92 22 chrX 142444350 142445295 -24205001 - Lx9 LINE L1 -42 7602 6592 6 1671 2472 105 24 55 chrX 142446565 142446980 -24203316 + RLTR9D LTR ERVK 1 402 -1 6 1671 359 349 77 18 chrX 142447352 142447574 -24202722 - L1M5 LINE L1 -413 5760 5526 6 1671 228 272 241 24 chrX 142447930 142448179 -24202117 - L1M5 LINE L1 -1150 4996 4694 6 1671 371 220 18 9 chrX 142448858 142448968 -24201328 - Lx6 LINE L1 -26 7434 7324 6 1671 650 202 0 58 chrX 142449573 142449710 -24200586 + B1F2 SINE Alu 11 139 -10 6 1671 1077 103 11 6 chrX 142450148 142450324 -24199972 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 6 1671 22 0 0 0 chrX 142450805 142450827 -24199469 + AT_rich Low_complexity Low_complexity 1 22 0 6 1671 377 281 97 85 chrX 142450889 142451093 -24199203 - L1MB8 LINE L1 -220 5958 5774 6 1671 1119 88 0 0 chrX 142451093 142451240 -24199056 - B1_Mus1 SINE Alu 0 148 2 6 1671 377 281 97 85 chrX 142451240 142451623 -24198673 - L1MB8 LINE L1 -405 5773 5364 6 1671 277 253 71 24 chrX 142451670 142451755 -24198541 - B3 SINE B2 -5 211 123 6 1671 1148 81 17 0 chrX 142451761 142451933 -24198363 - Lx3_Mus LINE L1 -19 6990 6816 6 1671 31 44 0 0 chrX 142452484 142452529 -24197767 + AT_rich Low_complexity Low_complexity 1 45 0 6 1671 437 237 0 10 chrX 142452575 142452673 -24197623 - B3 SINE B2 -119 97 1 6 1671 36 40 0 0 chrX 142453425 142453475 -24196821 + AT_rich Low_complexity Low_complexity 1 50 0 6 1671 2552 326 97 53 chrX 142453487 142454729 -24195567 - Lx8 LINE L1 -28 7445 6192 6 1671 315 0 0 0 chrX 142454729 142454764 -24195532 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1671 2552 289 91 30 chrX 142454764 142455400 -24194896 - Lx8 LINE L1 -1282 6191 5485 6 1671 23 54 0 0 chrX 142455967 142456004 -24194292 + AT_rich Low_complexity Low_complexity 1 37 0 7 1671 927 349 18 27 chrX 142456519 142456966 -24193330 + Lx9 LINE L1 6582 7024 -620 7 1671 973 218 15 24 chrX 142456971 142457201 -24193095 + RLTR20D LTR ERVK 104 330 -175 7 1671 4549 114 8 1 chrX 142457206 142457857 -24192439 + Lx2 LINE L1 5917 6571 -426 7 1671 1578 214 25 30 chrX 142457858 142457929 -24192367 + RLTR20D LTR ERVK 204 277 -291 7 1671 980 176 54 5 chrX 142457929 142458134 -24192162 + Lx2 LINE L1 6775 6989 -8 7 1671 1578 214 25 30 chrX 142458134 142458429 -24191867 + RLTR20D LTR ERVK 278 568 0 7 1671 1164 68 126 0 chrX 142458457 142458647 -24191649 + L1_Mus3 LINE L1 6425 6638 0 7 1671 681 299 117 42 chrX 142458664 142459236 -24191060 - BLACKJACK DNA AcHobo -1444 1500 886 7 1671 372 277 49 84 chrX 142459622 142459764 -24190532 + B4A SINE B4 78 214 -78 7 1671 917 92 0 0 chrX 142459638 142459768 -24190528 + B1_Mus1 SINE Alu 10 139 -9 7 1671 492 18 0 0 chrX 142460801 142460858 -24189438 + (CATAT)n Simple_repeat Simple_repeat 2 58 0 7 1671 550 64 0 41 chrX 142461314 142461412 -24188884 + (TCTG)n Simple_repeat Simple_repeat 2 95 0 7 1671 313 346 75 19 chrX 142461590 142461908 -24188388 - L1MC3 LINE L1 -295 7490 7155 7 1671 423 112 30 3 chrX 142462002 142462077 -24188219 - B1_Mur4 SINE Alu -5 145 33 7 1671 7313 76 6 3 chrX 142462077 142463589 -24186707 - L1_Mus2 LINE L1 -40 6526 5012 7 1671 466 234 0 0 chrX 142463589 142463713 -24186583 - L1_Rod LINE L1 -6444 728 605 7 1671 403 282 0 0 chrX 142464081 142464159 -24186137 - RSINE1 SINE B4 -2 163 86 7 1671 488 304 7 7 chrX 142464906 142465055 -24185241 - B1_Mur2 SINE Alu 0 149 1 7 1671 333 68 0 0 chrX 142466115 142466159 -24184137 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1671 486 46 0 0 chrX 142466159 142466223 -24184073 + (GA)n Simple_repeat Simple_repeat 2 66 0 7 1671 211 293 0 0 chrX 142466516 142466574 -24183722 + (TATG)n Simple_repeat Simple_repeat 3 60 0 7 1671 299 409 6 65 chrX 142466574 142466744 -24183552 - RSINE1 SINE B4 -2 163 4 7 1671 3414 245 77 18 chrX 142467797 142468702 -24181594 + Lx6 LINE L1 6068 7026 -434 7 1671 2069 88 38 62 chrX 142468709 142469049 -24181247 + IAPLTR1a_Mm LTR ERVK 1 332 -5 7 208 57017 16 6 6 chrX 142469049 142475529 -24174767 + IAPEz-int LTR ERVK 6 6481 0 7 1672 2085 87 38 61 chrX 142475529 142475872 -24174424 + IAPLTR1a_Mm LTR ERVK 1 335 -2 7 1672 834 244 20 10 chrX 142475872 142476071 -24174225 + Lx6 LINE L1 7083 7283 -177 7 1672 7700 156 53 8 chrX 142476642 142478874 -24171422 + L1Md_F LINE L1 98 2433 -3450 7 1672 7192 100 11 1 chrX 142478871 142480258 -24170038 + L1_Mus1 LINE L1 5168 6565 -2 7 1672 33 25 0 0 chrX 142480345 142480385 -24169911 + AT_rich Low_complexity Low_complexity 1 40 0 7 1672 1279 132 29 19 chrX 142480402 142480611 -24169685 - RMER19A LTR ERVK -478 259 49 7 1672 387 148 0 0 chrX 142480612 142480673 -24169623 - RMER19A LTR ERVK -632 105 45 7 1672 885 334 21 8 chrX 142481252 142481629 -24168667 - Lx8 LINE L1 -465 7008 6627 7 1672 231 61 0 0 chrX 142481663 142481696 -24168600 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 7 1672 535 160 8 8 chrX 142481696 142481816 -24168480 - Lx3A LINE L1 -12 6969 6850 7 1672 1109 109 14 81 chrX 142481822 142482012 -24168284 + L1_Mur1 LINE L1 4481 4665 -1221 7 1672 3289 64 0 2 chrX 142482012 142482433 -24167863 - L1_Mus1 LINE L1 0 6567 6148 7 1672 1109 109 14 81 chrX 142482433 142482451 -24167845 + L1_Mur1 LINE L1 4666 4675 -1211 7 1672 3500 138 9 9 chrX 142482473 142483168 -24167128 + L1VL4 LINE L1 700 1393 -4484 7 1672 323 13 0 0 chrX 142483141 142483193 -24167103 + L1Md_F3 LINE L1 6527 6579 -3 7 1672 3324 93 36 2 chrX 142483223 142483748 -24166548 + L1VL4 LINE L1 1336 1878 -2036 7 1672 5360 110 65 31 chrX 142483745 142484596 -24165700 + L1_Mus4 LINE L1 5592 6471 -165 7 1672 2277 176 17 12 chrX 142484579 142485118 -24165178 - Lx4B LINE L1 -1025 6033 5487 7 1672 1053 255 41 15 chrX 142485127 142485393 -24164903 + MTD LTR MaLR 115 387 -32 7 1672 1450 170 0 97 chrX 142485393 142485692 -24164604 - ORR1B1 LTR MaLR 0 394 125 7 1672 1965 193 108 151 chrX 142485692 142486436 -24163860 - RLTR25B LTR ERVK 0 1028 317 7 1672 420 237 128 53 chrX 142486459 142486646 -24163650 - Charlie1b DNA MER1_type -140 383 183 7 1672 1623 171 50 40 chrX 142486666 142486988 -24163308 - RLTR25B LTR ERVK -703 325 1 7 1672 430 156 0 25 chrX 142486988 142487067 -24163229 - ORR1B1 LTR MaLR -252 77 1 7 1672 487 301 47 21 chrX 142487118 142487311 -24162985 - Lx8 LINE L1 -860 6613 6416 7 1672 207 69 0 0 chrX 142487311 142487340 -24162956 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 1672 204 185 0 0 chrX 142487340 142487394 -24162902 + GA-rich Low_complexity Low_complexity 2 55 0 7 1672 643 287 27 22 chrX 142487394 142487579 -24162717 - Lx8 LINE L1 -1057 6416 6231 7 1672 180 0 0 0 chrX 142488368 142488388 -24161908 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 7 1672 868 32 40 0 chrX 142488595 142488720 -24161576 + (TCTCTG)n Simple_repeat Simple_repeat 2 131 0 7 1672 255 31 0 0 chrX 142488721 142488753 -24161543 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 1672 1214 261 18 141 chrX 142488771 142489005 -24161291 - RLTR31_Mur LTR ERVK -45 516 303 7 1672 2962 80 5 2 chrX 142489005 142489404 -24160892 + MTB LTR MaLR 1 400 0 7 1672 1214 214 9 126 chrX 142489404 142489746 -24160550 - RLTR31_Mur LTR ERVK -250 303 10 7 1672 252 390 45 77 chrX 142489903 142489951 -24160345 - MLT1E2 LTR MaLR -281 346 307 7 1672 752 181 14 0 chrX 142489951 142490089 -24160207 - B1_Mur4 SINE Alu -7 143 4 7 1672 252 390 45 77 chrX 142490089 142490262 -24160034 - MLT1E2 LTR MaLR -321 306 132 7 1672 1579 130 20 130 chrX 142490312 142490356 -24159940 - ORR1A3 LTR MaLR -17 309 280 7 1672 882 205 32 11 chrX 142490356 142490543 -24159753 - Lx2 LINE L1 -1 6996 6806 7 1672 1579 130 20 130 chrX 142490543 142490694 -24159602 - ORR1A3 LTR MaLR -47 279 131 7 1672 1165 105 47 0 chrX 142490694 142490866 -24159430 + B2_Mm1t SINE B2 1 180 -13 7 1672 1579 130 20 130 chrX 142490866 142491015 -24159281 - ORR1A3 LTR MaLR -196 130 2 7 1672 22 35 0 0 chrX 142491154 142491183 -24159113 + AT_rich Low_complexity Low_complexity 1 29 0 7 1672 29 0 0 0 chrX 142492182 142492211 -24158085 + AT_rich Low_complexity Low_complexity 1 29 0 7 1672 2296 227 177 26 chrX 142492395 142493119 -24157177 - Lx4B LINE L1 0 7058 6226 7 1672 405 0 0 0 chrX 142493959 142494004 -24156292 + (TAA)n Simple_repeat Simple_repeat 2 46 0 7 1672 263 307 44 59 chrX 142494130 142494265 -24156031 - L1MC1 LINE L1 -20 6313 6181 7 1672 218 105 0 26 chrX 142494272 142494311 -24155985 + (TA)n Simple_repeat Simple_repeat 2 39 0 7 1672 449 256 93 0 chrX 142494376 142494505 -24155791 - L1MC1 LINE L1 -292 6041 5901 7 1672 471 159 37 9 chrX 142494514 142494622 -24155674 + Lx3C LINE L1 6863 6973 -3 7 1672 1043 272 43 32 chrX 142494671 142495112 -24155184 - L1MCa LINE L1 -5483 1025 580 7 1672 313 75 0 0 chrX 142495142 142495182 -24155114 - L1_Mus2 LINE L1 -134 6432 6393 7 1672 715 70 139 9 chrX 142495182 142495297 -24154999 + L1_Mus2 LINE L1 6436 6565 -1 7 1672 258 338 131 8 chrX 142495627 142495863 -24154433 - L1MCa LINE L1 -6178 330 66 7 1672 971 107 0 13 chrX 142496161 142496313 -24153983 + L1_Mur1 LINE L1 4777 4926 -960 7 1672 8888 190 95 69 chrX 142496310 142496441 -24153855 + Lx6 LINE L1 3301 3452 -2428 7 1672 459 0 0 0 chrX 142496441 142496492 -24153804 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1672 372 43 0 0 chrX 142496492 142496537 -24153759 + (TA)n Simple_repeat Simple_repeat 2 47 0 7 1672 8888 207 79 63 chrX 142496537 142497177 -24153119 + Lx6 LINE L1 3453 4125 -3335 7 1672 516 221 165 0 chrX 142497177 142497305 -24152991 + B1_Mus1 SINE Alu 2 149 0 7 1672 8888 207 79 63 chrX 142497305 142499682 -24150614 + Lx6 LINE L1 4126 6627 -833 7 1672 1127 62 7 7 chrX 142499718 142499864 -24150432 + B1_Mus1 SINE Alu 2 147 -1 7 1672 343 295 118 26 chrX 142500556 142500709 -24149587 - Charlie16a DNA MER1_type -131 211 45 1 1672 306 0 0 0 chrX 142500950 142500984 -24149312 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1672 334 279 91 76 chrX 142500984 142501182 -24149114 + RMER10A LTR ERVL 222 422 -20 3 1672 24 32 0 0 chrX 142501523 142501554 -24148742 + AT_rich Low_complexity Low_complexity 1 31 0 4 1672 327 164 0 0 chrX 142501557 142501618 -24148678 + (TA)n Simple_repeat Simple_repeat 2 62 0 5 1672 1110 220 46 3 chrX 142502004 142502332 -24147964 - Lx9 LINE L1 -1 7643 7302 6 1672 550 338 61 18 chrX 142502343 142502620 -24147676 + Lx9 LINE L1 6993 7281 -363 7 1672 391 220 19 29 chrX 142502728 142502831 -24147465 + RCHARR1 DNA MER1_type 307 408 -566 8 1672 1606 107 16 28 chrX 142502941 142503192 -24147104 + RLTR8 LTR ERVK 118 365 0 9 1672 12621 97 5 21 chrX 142503192 142504971 -24145325 + SRV_MM-int LTR ERVK 1 1750 -4417 9 1672 958 40 0 24 chrX 142504971 142505091 -24145205 - L1_Mm LINE L1 -793 5090 4973 1 1672 5947 61 4 5 chrX 142505091 142505862 -24144434 + L1Md_F2 LINE L1 5805 6574 -8 1 1672 8114 83 25 5 chrX 142505868 142506972 -24143324 + SRV_MM-int LTR ERVK 1753 2877 -3290 9 1672 7390 78 75 35 chrX 142506993 142508088 -24142208 + SRV_MM-int LTR ERVK 5023 6161 -6 9 1672 1324 133 0 32 chrX 142508090 142508307 -24141989 + RLTR8 LTR ERVK 153 362 -3 1 1672 360 0 0 0 chrX 142508331 142508371 -24141925 + (TTA)n Simple_repeat Simple_repeat 3 42 0 1 1672 4066 98 2 7 chrX 142508371 142508954 -24141342 - L1Md_F2 LINE L1 -24 6558 5979 1 1672 753 326 39 16 chrX 142508954 142509263 -24141033 + MTE2a LTR MaLR 57 372 -7 1 1672 1507 241 39 104 chrX 142509280 142509491 -24140805 + RCHARR1 DNA MER1_type 417 609 -365 8 1672 2358 170 118 121 chrX 142509491 142510180 -24140116 - RMER6C LTR ERVK -3 687 1 1 1672 1507 241 39 104 chrX 142510180 142510329 -24139967 + RCHARR1 DNA MER1_type 610 740 -234 8 1672 730 243 96 137 chrX 142510329 142510724 -24139572 + MTE2a LTR MaLR 1 379 0 1 1672 1507 241 39 104 chrX 142510724 142510951 -24139345 + RCHARR1 DNA MER1_type 741 967 -7 8 1672 9331 109 7 1 chrX 142512237 142513620 -24136676 - L1_Mus1 LINE L1 -481 5402 4012 1 1672 7157 79 27 2 chrX 142513618 142514758 -24135538 + L1_Mus1 LINE L1 5398 6566 -1 1 1672 297 109 0 0 chrX 142515685 142515731 -24134565 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1672 248 111 22 0 chrX 142517971 142518016 -24132280 + (TCCC)n Simple_repeat Simple_repeat 2 47 0 2 1672 699 46 0 0 chrX 142518016 142518103 -24132193 + (TCTA)n Simple_repeat Simple_repeat 1 87 0 2 1672 1447 208 19 3 chrX 142518425 142518739 -24131557 + Lx5 LINE L1 3679 3997 -1883 2 1672 3083 211 176 19 chrX 142518737 142519607 -24130689 + Lx5 LINE L1 4779 5784 -96 2 1672 2169 199 21 2 chrX 142519607 142520030 -24130266 + Lx2B LINE L1 6570 7000 0 2 1672 1967 294 97 146 chrX 142520030 142520071 -24130225 + Lx5 LINE L1 5758 5758 -1292 2 1672 998 117 0 0 chrX 142520071 142520208 -24130088 + B1_Mus1 SINE Alu 2 138 -10 2 1672 1967 294 97 146 chrX 142520208 142520583 -24129713 + Lx5 LINE L1 5758 6160 -890 2 1672 615 27 0 0 chrX 142520583 142520656 -24129640 + (GA)n Simple_repeat Simple_repeat 1 73 0 2 1672 1967 295 98 137 chrX 142520656 142521558 -24128738 + Lx5 LINE L1 6161 7444 -16 2 1672 563 27 0 14 chrX 142521772 142521846 -24128450 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 2 1672 348 24 0 0 chrX 142524049 142524090 -24126206 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 2 1672 566 222 21 11 chrX 142524277 142524515 -24125781 + Lx9 LINE L1 7343 7608 -36 2 1672 311 192 0 64 chrX 142525662 142525740 -24124556 + B1_Mus2 SINE Alu 66 138 -9 2 1672 180 0 0 0 chrX 142525741 142525761 -24124535 + (CAAAC)n Simple_repeat Simple_repeat 1 20 0 3 1672 516 45 67 0 chrX 142525765 142525854 -24124442 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 3 1672 306 0 0 0 chrX 142527142 142527176 -24123120 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1672 225 0 0 0 chrX 142529694 142529719 -24120577 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1672 207 69 0 0 chrX 142531062 142531091 -24119205 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1672 1890 39 0 0 chrX 142531131 142531360 -24118936 - L1_Mus1 LINE L1 -1 6566 6338 3 1672 255 61 0 0 chrX 142531360 142531393 -24118903 + L1_Mus1 LINE L1 6205 6237 -329 3 1672 21 0 0 0 chrX 142531393 142531414 -24118882 + AT_rich Low_complexity Low_complexity 1 21 0 3 1672 255 234 0 0 chrX 142531946 142531993 -24118303 + ID_B1 SINE B4 176 222 -2 3 1672 21 0 0 0 chrX 142533116 142533137 -24117159 + AT_rich Low_complexity Low_complexity 1 21 0 3 1672 928 123 0 49 chrX 142533470 142533632 -24116664 + Lx3A LINE L1 6820 6973 -8 3 1672 350 257 0 0 chrX 142533697 142533767 -24116529 + B3A SINE B2 5 74 -124 4 1672 4804 107 1 121 chrX 142534975 142535837 -24114459 - L1_Mus2 LINE L1 -1 6565 5807 4 1672 2120 105 6 0 chrX 142535837 142536161 -24114135 + MusHAL1 LINE L1 1656 1981 -731 4 1672 234 352 72 48 chrX 142536251 142536460 -24113836 - L2 LINE L2 -972 2447 2234 4 1672 415 345 20 26 chrX 142536550 142536702 -24113594 + ID_B1 SINE B4 62 212 -12 4 1672 348 356 50 100 chrX 142537510 142537991 -24112305 - HAL1 LINE L1 -752 1755 1299 4 1672 1292 309 86 58 chrX 142538111 142538352 -24111944 - Lx9 LINE L1 -145 7499 7219 4 1672 916 38 0 30 chrX 142538352 142538486 -24111810 + L1Md_F2 LINE L1 6441 6570 -12 4 1672 1292 309 86 58 chrX 142538486 142538623 -24111673 - Lx9 LINE L1 -426 7218 7094 4 1672 1440 81 40 0 chrX 142538623 142538821 -24111475 - L1_Mus2 LINE L1 -1 6565 6360 4 1672 1292 309 86 58 chrX 142538821 142539197 -24111099 - Lx9 LINE L1 -551 7093 6724 4 1672 937 246 172 29 chrX 142539199 142539923 -24110373 + Lx9 LINE L1 5278 6103 -1541 4 1672 258 156 0 0 chrX 142540062 142540107 -24110189 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 5 1672 493 260 51 51 chrX 142540120 142540234 -24110062 - Lx9 LINE L1 -124 7520 7412 5 1672 519 17 0 0 chrX 142540234 142540294 -24110002 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 5 1672 493 260 51 51 chrX 142540294 142540475 -24109821 - Lx9 LINE L1 -233 7411 7225 5 1672 787 248 33 58 chrX 142540495 142540769 -24109527 - Lx9 LINE L1 -492 7152 6886 5 1672 25 31 0 0 chrX 142540770 142540802 -24109494 + AT_rich Low_complexity Low_complexity 1 32 0 5 1672 779 299 25 0 chrX 142540819 142541016 -24109280 - B3 SINE B2 -13 203 2 5 1672 672 268 20 26 chrX 142541037 142541232 -24109064 - B3A SINE B2 -1 197 4 5 1672 531 313 66 0 chrX 142541272 142541470 -24108826 + ID_B1 SINE B4 2 212 -12 5 1672 338 382 90 7 chrX 142541496 142541641 -24108655 + RSINE1 SINE B4 3 159 -6 5 1672 25 31 0 0 chrX 142541649 142541681 -24108615 + AT_rich Low_complexity Low_complexity 1 32 0 5 1672 986 64 0 7 chrX 142541684 142541826 -24108470 + L1_Mus2 LINE L1 6426 6566 0 5 1672 492 232 84 0 chrX 142542059 142542214 -24108082 + L1MA9 LINE L1 6076 6243 -69 6 1672 226 53 88 0 chrX 142542215 142542272 -24108024 + (TA)n Simple_repeat Simple_repeat 1 62 0 6 1672 192 77 0 0 chrX 142542454 142542480 -24107816 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 6 1672 390 281 10 10 chrX 142542782 142542886 -24107410 + ORR1E LTR MaLR 3 106 -253 6 1672 825 203 126 6 chrX 142542909 142543092 -24107204 + ORR1C1 LTR MaLR 1 205 -173 6 1672 617 222 59 0 chrX 142543838 142543973 -24106323 + B1_Mus2 SINE Alu 5 147 0 6 1672 241 210 0 31 chrX 142543974 142544038 -24106258 + A-rich Low_complexity Low_complexity 3 64 0 6 1672 590 0 14 0 chrX 142544145 142544215 -24106081 + (TTC)n Simple_repeat Simple_repeat 2 72 0 6 1672 191 36 36 0 chrX 142544215 142544243 -24106053 + (TTA)n Simple_repeat Simple_repeat 3 31 0 6 1672 215 317 17 0 chrX 142544249 142544309 -24105987 + B4 SINE B4 6 66 -226 6 1672 23 33 0 0 chrX 142545794 142545824 -24104472 + AT_rich Low_complexity Low_complexity 1 30 0 7 1672 395 390 49 58 chrX 142546579 142546944 -24103352 + MLT1A0 LTR MaLR 1 362 -3 7 1672 311 334 48 39 chrX 142547335 142547646 -24102650 - L1ME5 LINE L1 -220 5974 5661 7 1672 242 115 0 19 chrX 142547867 142547920 -24102376 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 7 1672 323 308 62 31 chrX 142548607 142548768 -24101528 - MIR3 SINE MIR -23 185 20 7 1672 642 327 87 12 chrX 142549462 142549796 -24100500 + ORR1E LTR MaLR 1 359 0 7 1672 23 54 0 0 chrX 142553297 142553334 -24096962 + AT_rich Low_complexity Low_complexity 1 37 0 7 1672 542 269 126 26 chrX 142554308 142554441 -24095855 - B4A SINE B4 -82 210 80 7 1672 447 35 0 0 chrX 142554441 142554498 -24095798 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1672 542 269 126 26 chrX 142554498 142554555 -24095741 - B4A SINE B4 -213 79 2 7 1672 2895 94 10 0 chrX 142554618 142555010 -24095286 + MTB LTR MaLR 1 396 -4 7 1672 21 82 0 0 chrX 142555498 142555547 -24094749 + AT_rich Low_complexity Low_complexity 1 49 0 8 1672 294 143 0 0 chrX 142555806 142555855 -24094441 + (TA)n Simple_repeat Simple_repeat 2 50 0 8 1672 22 35 0 0 chrX 142556516 142556545 -24093751 + AT_rich Low_complexity Low_complexity 1 29 0 8 1672 339 25 0 0 chrX 142556752 142556792 -24093504 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 1672 894 295 108 6 chrX 142557327 142557661 -24092635 - ORR1D2 LTR MaLR -2 368 1 8 1672 329 290 19 48 chrX 142557889 142557994 -24092302 + RSINE1 SINE B4 3 104 -61 8 1672 939 129 0 0 chrX 142558049 142558204 -24092092 + (CA)n Simple_repeat Simple_repeat 2 156 0 8 1672 2468 243 19 7 chrX 142558280 142558848 -24091448 - Lx9 LINE L1 -376 7268 6694 8 1672 476 282 0 0 chrX 142558920 142559023 -24091273 - Lx9 LINE L1 -957 6687 6585 8 1672 388 340 21 7 chrX 142559412 142559554 -24090742 - B1_Mur2 SINE Alu -5 144 1 8 1672 304 327 83 8 chrX 142559579 142559832 -24090464 - L1M5 LINE L1 -439 5740 5469 8 1672 1814 261 22 24 chrX 142560172 142560671 -24089625 + L1VL4 LINE L1 256 753 -5549 9 1672 384 67 0 32 chrX 142560671 142560733 -24089563 + B1_Mus1 SINE Alu 1 60 -88 9 1672 235 120 0 152 chrX 142560821 142560880 -24089416 + 4.5SRNA scRNA scRNA 40 89 -5 9 1672 706 58 9 37 chrX 142560827 142560935 -24089361 + B1_Mm SINE Alu 42 146 -1 9 1672 217 83 40 40 chrX 142560937 142560987 -24089309 + A-rich Low_complexity Low_complexity 3 52 0 9 1672 233 23 0 157 chrX 142560989 142561040 -24089256 + MusHAL1 LINE L1 585 627 -2727 9 1672 24722 138 6 4 chrX 142561039 142563264 -24087032 + L1_Mm LINE L1 1642 3867 -2016 9 1672 1274 220 26 13 chrX 142563264 142563577 -24086719 - RLTR46 LTR ERVK -3 317 1 9 1672 24722 138 6 4 chrX 142563577 142565427 -24084869 + L1_Mm LINE L1 3868 5723 -160 9 1672 2830 127 11 2 chrX 142565427 142565868 -24084428 + L1_Mus3 LINE L1 6194 6638 0 9 1672 1038 135 0 0 chrX 142566152 142566330 -24083966 + (TC)n Simple_repeat Simple_repeat 1 178 0 9 1672 2288 151 47 5 chrX 142566456 142566841 -24083455 + RLTR9D LTR ERVK 1 401 -2 1 1672 571 319 28 9 chrX 142566851 142567069 -24083227 - Lx7 LINE L1 -396 7300 7079 1 1672 1522 296 39 41 chrX 142567072 142567672 -24082624 + Lx7 LINE L1 6103 6649 -824 1 1672 2255 127 14 6 chrX 142567672 142568028 -24082268 - Lx3A LINE L1 -7 6974 6616 1 1672 1060 294 74 15 chrX 142568028 142568434 -24081862 + Lx7 LINE L1 6640 7067 -629 1 1672 382 307 113 38 chrX 142568513 142568912 -24081384 - L1MC1 LINE L1 -69 6264 5836 1 1672 476 334 122 27 chrX 142568920 142569415 -24080881 - L1MEg LINE L1 -4532 1883 1364 1 1672 281 100 0 20 chrX 142570528 142570579 -24079717 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1672 458 354 0 0 chrX 142570584 142570711 -24079585 - RSINE1 SINE B4 -36 129 3 1 1672 22 70 0 0 chrX 142571181 142571224 -24079072 + AT_rich Low_complexity Low_complexity 1 43 0 1 1672 25 0 0 0 chrX 142571317 142571342 -24078954 + AT_rich Low_complexity Low_complexity 1 25 0 1 1672 207 0 0 0 chrX 142572204 142572227 -24078069 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 1672 185 340 26 70 chrX 142572637 142572751 -24077545 - MIR SINE MIR -123 139 31 1 1672 2281 106 9 0 chrX 142572785 142573105 -24077191 - Lx3_Mus LINE L1 0 7009 6687 1 1672 4763 82 3 2 chrX 142573429 142574064 -24076232 + L1_Mus2 LINE L1 5917 6552 -14 1 1672 291 28 0 0 chrX 142574300 142574336 -24075960 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 1 1672 934 68 15 0 chrX 142574344 142574476 -24075820 - B1_Mus2 SINE Alu 0 147 14 1 1672 542 159 122 0 chrX 142574545 142574652 -24075644 + MTC LTR MaLR 1 120 -301 1 1672 5396 82 19 7 chrX 142574656 142575404 -24074892 - L1Md_F2 LINE L1 0 6582 5826 1 1672 8618 62 0 2 chrX 142575404 142576666 -24073630 - L1Md_F2 LINE L1 -556 6026 4768 1 1672 240 196 22 0 chrX 142576686 142576732 -24073564 + MTC LTR MaLR 188 234 -185 1 1672 3525 216 29 60 chrX 142576732 142577550 -24072746 + Lx4B LINE L1 6259 7051 -7 1 1672 26 64 0 0 chrX 142577762 142577809 -24072487 + AT_rich Low_complexity Low_complexity 1 47 0 1 1672 642 258 83 16 chrX 142578406 142578599 -24071697 - MTEa LTR MaLR -5 374 169 1 1672 2119 319 74 21 chrX 142578862 142579757 -24070539 - Lx7 LINE L1 -375 7321 6380 1 1672 4708 85 135 1 chrX 142579989 142580687 -24069609 - L1_Mus3 LINE L1 -7 6631 5841 1 1672 989 133 2 3 chrX 142580688 142580844 -24069452 + L1_Mm LINE L1 5548 5731 -560 1 1672 195 42 0 0 chrX 142581039 142581063 -24069233 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 1 1672 253 169 0 53 chrX 142581979 142582054 -24068242 + CT-rich Low_complexity Low_complexity 3 73 0 1 1672 315 295 11 0 chrX 142582206 142582301 -24067995 + MLT2D LTR ERVL 31 126 -288 1 1672 1551 285 50 12 chrX 142582346 142582769 -24067527 - Lx5 LINE L1 -35 7015 6577 1 1672 293 22 0 98 chrX 142582784 142582835 -24067461 + (TTTA)n Simple_repeat Simple_repeat 4 49 0 1 1672 1041 149 0 6 chrX 142582835 142582990 -24067306 - B2_Mm2 SINE B2 -40 155 1 1 1672 465 186 47 0 chrX 142582994 142583080 -24067216 + MTC LTR MaLR 114 203 -218 1 1672 31357 90 10 13 chrX 142583082 142588276 -24062020 + L1Md_F2 LINE L1 410 5585 -298 1 1672 8010 49 0 5 chrX 142588277 142589266 -24061030 + L1Md_F2 LINE L1 5587 6570 -12 1 1672 979 189 68 5 chrX 142589266 142589458 -24060838 + MTC LTR MaLR 210 413 -8 1 1672 5778 136 10 22 chrX 142589547 142590516 -24059780 + Lx3A LINE L1 6011 6968 -13 1 1672 309 51 0 0 chrX 142590516 142590555 -24059741 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1672 430 320 1 33 chrX 142590895 142591053 -24059243 - B3A SINE B2 0 216 70 1 1672 36254 33 5 8 chrX 142591657 142596832 -24053464 + L1Md_T LINE L1 439 5586 -297 1 1672 8391 37 0 0 chrX 142596832 142597828 -24052468 + L1Md_T LINE L1 5587 6582 0 1 1672 24702 187 17 32 chrX 142597828 142598841 -24051455 + Lx4B LINE L1 5583 6387 -671 1 1672 450 53 0 0 chrX 142598841 142598898 -24051398 + (CAAAA)n Simple_repeat Simple_repeat 2 58 0 1 1672 5332 227 30 27 chrX 142598898 142599420 -24050876 + Lx4B LINE L1 6040 6796 -262 1 1672 547 234 22 0 chrX 142599696 142599833 -24050463 + L1MA7 LINE L1 6128 6267 -24 1 1672 390 159 0 0 chrX 142601701 142601770 -24048526 + A-rich Low_complexity Low_complexity 5 73 0 1 1672 393 134 0 15 chrX 142601965 142602033 -24048263 + L1_Mur2 LINE L1 1341 1407 -4470 1 1672 410 360 13 20 chrX 142602208 142602358 -24047938 + B1F SINE Alu 1 149 0 1 1672 21 36 0 0 chrX 142602615 142602643 -24047653 + AT_rich Low_complexity Low_complexity 1 28 0 1 1672 1772 272 65 94 chrX 142602661 142603679 -24046617 + RMER17B LTR ERVK 1 899 -9 1 1672 555 244 17 0 chrX 142603743 142603858 -24046438 + RLTR25B LTR ERVK 912 1028 0 1 1672 691 347 96 34 chrX 142603858 142604654 -24045642 - L1MC1 LINE L1 -117 6216 5372 1 1672 22 0 0 0 chrX 142604912 142604934 -24045362 + AT_rich Low_complexity Low_complexity 1 22 0 1 1672 231 298 0 0 chrX 142604986 142605070 -24045226 - L1MA7 LINE L1 -135 6156 6073 1 1672 515 333 13 6 chrX 142605185 142605342 -24044954 - ORR1E LTR MaLR -201 158 1 1 1672 340 285 55 7 chrX 142605342 142605487 -24044809 - L1M2 LINE L1 -1139 5004 4853 1 1672 641 71 157 93 chrX 142605534 142605584 -24044712 - L1_Mus1 LINE L1 -587 5980 5938 1 1672 3063 63 5 2 chrX 142605584 142605984 -24044312 + L1Md_F2 LINE L1 6182 6582 0 1 1672 641 71 157 93 chrX 142605984 142606073 -24044223 - L1_Mus1 LINE L1 -630 5937 5832 1 3 3987 61 4 8 chrX 142606077 142606588 -24043708 + L1_Mus1 LINE L1 6058 6566 -1 1 1673 23 0 0 0 chrX 142606588 142606611 -24043685 + AT_rich Low_complexity Low_complexity 1 23 0 1 1673 584 279 112 0 chrX 142606721 142606882 -24043414 - B3 SINE B2 0 216 38 1 1673 514 342 0 47 chrX 142606934 142607103 -24043193 + B3A SINE B2 38 198 0 1 1673 1382 23 23 0 chrX 142607218 142607393 -24042903 - L1Md_F3 LINE L1 0 6584 6406 1 1673 353 347 7 26 chrX 142608442 142608593 -24041703 + B1F SINE Alu 1 148 -1 1 1673 344 285 85 28 chrX 142608810 142608987 -24041309 + L1MEb LINE L1 720 906 -5164 1 1673 287 292 68 34 chrX 142609000 142609177 -24041119 + L1MCb LINE L1 798 980 -5065 1 1673 412 308 86 40 chrX 142609341 142609642 -24040654 - L1M3 LINE L1 -1130 5013 4699 1 1673 262 356 16 65 chrX 142609644 142609767 -24040529 + RMER12 LTR ERVK 737 853 -469 1 1673 4577 66 5 0 chrX 142609769 142610359 -24039937 - L1_Mus1 LINE L1 -3 6564 5972 1 1673 338 165 0 12 chrX 142611027 142611107 -24039189 + GA-rich Low_complexity Low_complexity 2 80 0 1 1673 191 135 0 55 chrX 142611430 142611485 -24038811 + T-rich Low_complexity Low_complexity 1 52 0 1 1673 234 196 0 0 chrX 142611641 142611697 -24038599 - L1M3 LINE L1 -1526 4614 4559 1 1673 33365 104 13 12 chrX 142611752 142618112 -24032184 - L1Md_F2 LINE L1 0 6582 213 1 1673 247 337 0 0 chrX 142618290 142618385 -24031911 - L1M3 LINE L1 -2367 3773 3679 1 1673 1299 204 20 46 chrX 142618507 142618852 -24031444 + Lx7 LINE L1 4677 5012 -868 1 1673 6189 245 42 19 chrX 142618831 142620410 -24029886 + Lx7 LINE L1 5626 7241 -455 1 1673 509 173 0 17 chrX 142620560 142620736 -24029560 + (TCTCTG)n Simple_repeat Simple_repeat 2 174 0 1 1673 557 265 51 58 chrX 142620736 142621012 -24029284 + Lx7 LINE L1 7422 7695 -1 1 1673 21 36 0 0 chrX 142621190 142621218 -24029078 + AT_rich Low_complexity Low_complexity 1 28 0 1 1673 803 160 0 0 chrX 142621310 142621441 -24028855 - B1_Mus2 SINE Alu -15 132 2 1 1673 594 274 181 11 chrX 142621565 142622023 -24028273 - L1M3 LINE L1 -2981 3159 2624 1 1673 1030 295 20 3 chrX 142622092 142622398 -24027898 + Lx7 LINE L1 6929 7239 -457 1 1673 369 328 73 39 chrX 142622773 142622979 -24027317 - L1M3 LINE L1 -3757 2386 2174 1 1673 207 0 0 0 chrX 142622990 142623013 -24027283 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 1673 213 277 0 0 chrX 142624249 142624296 -24026000 - PB1D10 SINE Alu -19 98 52 1 1673 284 290 44 88 chrX 142624562 142624698 -24025598 - B3A SINE B2 0 216 87 1 1673 816 50 16 8 chrX 142625229 142625351 -24024945 + L1Md_F3 LINE L1 6461 6583 -1 1 1673 782 243 0 0 chrX 142625564 142625708 -24024588 - B1_Mur4 SINE Alu 0 150 7 1 1673 23 78 0 0 chrX 142625952 142626003 -24024293 + AT_rich Low_complexity Low_complexity 1 51 0 1 1673 647 25 12 0 chrX 142626487 142626568 -24023728 + (TC)n Simple_repeat Simple_repeat 2 83 0 1 1673 269 291 74 113 chrX 142626921 142627150 -24023146 + MT2B2 LTR ERVL 16 235 -349 1 1673 280 272 155 0 chrX 142627075 142627178 -24023118 + ID_B1 SINE B4 80 198 -26 1 1673 607 132 123 0 chrX 142627086 142627192 -24023104 + B1_Mus1 SINE Alu 15 133 -15 1 1673 189 0 0 0 chrX 142627198 142627219 -24023077 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 1673 480 211 106 84 chrX 142627516 142627671 -24022625 - MTD LTR MaLR -16 403 240 1 1673 296 315 14 0 chrX 142627993 142628066 -24022230 + ID4_ SINE ID 10 83 0 1 1673 482 286 38 40 chrX 142628260 142628513 -24021783 - L1_Mur2 LINE L1 -567 5313 5034 1 1673 967 304 151 15 chrX 142628520 142628997 -24021299 + Lx8 LINE L1 6725 7266 -207 1 1673 930 339 43 15 chrX 142628983 142629375 -24020921 + Lx7 LINE L1 6906 7308 -388 1 1673 246 205 12 25 chrX 142629378 142629458 -24020838 + T-rich Low_complexity Low_complexity 2 80 0 1 1673 3357 38 0 0 chrX 142629789 142630187 -24020109 + L1Md_T LINE L1 6184 6581 -1 1 1673 362 333 116 24 chrX 142630187 142630567 -24019729 + L1_Mur3 LINE L1 5350 5799 -501 1 1673 2377 284 115 95 chrX 142630592 142631707 -24018589 - ORR1D-int LTR MaLR -232 1138 2 1 1673 611 191 22 0 chrX 142631803 142631939 -24018357 - Lx2A1 LINE L1 -7 7001 6863 1 1673 324 317 166 22 chrX 142631999 142632228 -24018068 - MTD LTR MaLR -112 262 1 1 1673 2396 287 84 37 chrX 142634042 142634448 -24015848 - Lx9 LINE L1 -232 7412 7002 1 1673 216 0 0 0 chrX 142634448 142634472 -24015824 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1673 2396 287 84 37 chrX 142634472 142635102 -24015194 - Lx9 LINE L1 -643 7001 6327 1 1673 416 194 75 0 chrX 142635372 142635486 -24014810 - L1MC4a LINE L1 -1057 6938 6813 1 1673 1433 278 19 56 chrX 142635486 142635916 -24014380 - MTD LTR MaLR 0 419 6 1 1673 247 312 0 11 chrX 142635960 142636054 -24014242 - L1MC4a LINE L1 -1423 6459 6367 1 1673 22 0 0 0 chrX 142636155 142636177 -24014119 + AT_rich Low_complexity Low_complexity 1 22 0 1 1673 1770 313 4 2 chrX 142636200 142636728 -24013568 + Lx8 LINE L1 6389 6917 -556 1 1673 441 0 0 0 chrX 142637154 142637203 -24013093 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 1 1673 1480 219 90 24 chrX 142637211 142637632 -24012664 - RMER17B LTR ERVK -505 453 5 1 1673 492 89 51 0 chrX 142637636 142637715 -24012581 - L1_Mur1 LINE L1 -2157 3729 3647 2 1673 411 88 0 0 chrX 142637712 142637769 -24012527 - MusHAL1 LINE L1 -370 2342 2286 2 1673 27 0 0 0 chrX 142637775 142637802 -24012494 + AT_rich Low_complexity Low_complexity 1 27 0 2 1673 396 226 17 25 chrX 142637816 142637934 -24012362 - MER45R DNA Tip100 -519 1062 946 2 1673 28563 136 29 25 chrX 142637935 142644259 -24006037 - L1_Mus2 LINE L1 0 6566 220 2 1673 310 243 48 19 chrX 142644555 142644660 -24005636 + Lx9 LINE L1 6996 7103 -541 2 1673 486 240 84 15 chrX 142644653 142644711 -24005585 + Lx9 LINE L1 7427 7484 -160 2 1673 345 47 0 0 chrX 142644711 142644754 -24005542 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 1673 405 58 0 0 chrX 142644754 142644805 -24005491 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1673 486 240 84 15 chrX 142644805 142644948 -24005348 + Lx9 LINE L1 7485 7641 -3 2 1673 821 234 20 15 chrX 142645212 142645412 -24004884 - Lx9 LINE L1 -371 7273 7073 2 1673 2982 117 13 4 chrX 142645811 142646273 -24004023 - Lx LINE L1 0 6654 6189 2 1673 264 343 24 24 chrX 142647354 142647524 -24002772 + Lx9 LINE L1 7296 7465 -179 2 1673 325 355 17 45 chrX 142647592 142647769 -24002527 - MER97c DNA MER1_type? -914 176 5 2 1673 29 78 0 0 chrX 142648859 142648923 -24001373 + AT_rich Low_complexity Low_complexity 1 64 0 2 1673 353 310 23 8 chrX 142649263 142649393 -24000903 + MIR3 SINE MIR 64 195 -13 2 1673 23 54 0 0 chrX 142649538 142649575 -24000721 + AT_rich Low_complexity Low_complexity 1 37 0 2 1673 3509 117 6 16 chrX 142650102 142651073 -23999223 - L1VL4 LINE L1 -2263 1296 333 2 1673 1004 214 17 13 chrX 142651089 142651321 -23998975 + RLTR28 LTR ERVL 292 524 0 2 1673 425 316 100 7 chrX 142653533 142653673 -23996623 + RSINE1 SINE B4 1 153 -12 2 1673 495 90 0 0 chrX 142653675 142653753 -23996543 + (CA)n Simple_repeat Simple_repeat 2 79 0 2 1673 779 189 28 0 chrX 142653780 142653923 -23996373 + B1_Mus2 SINE Alu 1 147 0 2 1673 306 230 66 26 chrX 142653977 142654053 -23996243 + ID_B1 SINE B4 75 153 -71 2 1673 351 224 146 19 chrX 142654057 142654262 -23996034 - Lx9 LINE L1 0 7644 7414 2 1673 781 347 58 34 chrX 142654520 142654848 -23995448 + Tigger7 DNA MER2_type 76 411 -2080 2 1673 24 0 0 0 chrX 142654970 142654994 -23995302 + AT_rich Low_complexity Low_complexity 1 24 0 2 1673 515 43 14 0 chrX 142655058 142655128 -23995168 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 1673 217 253 0 38 chrX 142655528 142655589 -23994707 + PB1 SINE Alu 31 82 -45 2 1673 2296 101 42 0 chrX 142655598 142655953 -23994343 - L1_Mus4 LINE L1 0 6636 6267 2 1673 373 286 83 64 chrX 142656622 142656779 -23993517 + RSINE1 SINE B4 3 162 -3 2 1673 432 37 0 0 chrX 142656785 142656839 -23993457 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1673 2393 134 27 12 chrX 142656840 142657248 -23993048 + Lx3A LINE L1 6568 6981 0 2 1673 24 0 0 0 chrX 142657248 142657272 -23993024 + AT_rich Low_complexity Low_complexity 1 24 0 2 1673 3977 206 53 10 chrX 142658481 142659296 -23991000 + Lx5 LINE L1 6201 7050 0 2 1673 1507 220 60 23 chrX 142659308 142659657 -23990639 + Lx5 LINE L1 6686 7047 -3 2 1673 1072 291 104 10 chrX 142659685 142659967 -23990329 + Lx8 LINE L1 5321 5606 -274 2 1673 183 42 0 0 chrX 142659967 142659991 -23990305 + (TA)n Simple_repeat Simple_repeat 2 25 0 2 1673 1072 253 149 5 chrX 142659991 142660312 -23989984 + Lx8 LINE L1 5607 5976 -1668 2 1673 238 132 0 0 chrX 142660702 142660740 -23989556 - Lx5 LINE L1 -1274 5776 5739 2 1673 5902 183 62 7 chrX 142660741 142661936 -23988360 + Lx3C LINE L1 5716 6976 0 2 1673 1170 262 115 14 chrX 142662057 142662475 -23987821 + Lx8 LINE L1 6405 6864 -609 2 1673 536 294 119 20 chrX 142662514 142662715 -23987581 + Lx8 LINE L1 6933 7153 -320 2 1673 320 0 25 0 chrX 142662754 142662794 -23987502 + (TTTG)n Simple_repeat Simple_repeat 3 43 0 2 1673 1790 318 42 19 chrX 142662823 142663494 -23986802 + Lx7 LINE L1 6490 7175 -521 2 1673 393 306 107 20 chrX 142663885 142664082 -23986214 + Tigger14a DNA MER2_type 78 291 -33 2 1673 248 295 13 0 chrX 142664832 142664910 -23985386 + ID4_ SINE ID 5 83 0 2 1673 23 0 0 0 chrX 142664922 142664945 -23985351 + AT_rich Low_complexity Low_complexity 1 23 0 2 1673 34 0 0 0 chrX 142665584 142665618 -23984678 + AT_rich Low_complexity Low_complexity 1 34 0 2 1673 22 35 0 0 chrX 142665636 142665665 -23984631 + AT_rich Low_complexity Low_complexity 1 29 0 2 1673 413 114 12 12 chrX 142666028 142666108 -23984188 - MT-int LTR MaLR -73 1025 946 2 1673 27 29 0 0 chrX 142666144 142666178 -23984118 + AT_rich Low_complexity Low_complexity 1 34 0 2 1673 2531 90 24 11 chrX 142666374 142666755 -23983541 + L1_Mus4 LINE L1 6244 6629 -7 2 1673 25 0 0 0 chrX 142667281 142667306 -23982990 + AT_rich Low_complexity Low_complexity 1 25 0 2 1673 780 253 17 11 chrX 142668339 142668519 -23981777 + B3A SINE B2 2 182 -16 2 1673 219 88 0 0 chrX 142668934 142668968 -23981328 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1673 308 358 106 59 chrX 142669121 142669525 -23980771 - L1MEg LINE L1 -4879 1205 783 2 1673 2637 169 16 6 chrX 142669604 142670162 -23980134 + Lx2B LINE L1 5356 5922 -1078 2 1673 633 295 39 18 chrX 142671212 142671611 -23978685 + L1MC1 LINE L1 4888 5297 -849 2 1673 285 308 37 37 chrX 142671653 142671761 -23978535 + PB1D7 SINE Alu 13 120 0 2 1673 34846 45 6 3 chrX 142671764 142676965 -23973331 + L1Md_T LINE L1 280 5589 -297 2 1673 8305 37 0 3 chrX 142676965 142677962 -23972334 + L1Md_T LINE L1 5590 6583 -2 2 1673 806 303 137 30 chrX 142678002 142678901 -23971395 + L1MC1 LINE L1 5319 6313 -20 2 1673 1003 87 14 0 chrX 142679170 142679308 -23970988 - B1_Mus1 SINE Alu -6 142 3 2 1673 27 0 0 0 chrX 142679513 142679540 -23970756 + AT_rich Low_complexity Low_complexity 1 27 0 2 1673 6112 48 10 1 chrX 142679755 142680521 -23969775 + L1Md_F2 LINE L1 5809 6581 -1 2 1673 536 208 54 31 chrX 142681014 142681143 -23969153 + ORR1D1 LTR MaLR 84 215 -159 2 1673 2796 238 43 3 chrX 142681142 142681740 -23968556 + ORR1D1-int LTR MaLR 744 1365 -5 2 1673 962 231 43 39 chrX 142681743 142682068 -23968228 + ORR1D1 LTR MaLR 1 369 -5 2 1673 522 322 60 98 chrX 142682083 142682451 -23967845 + MLT1B LTR MaLR 35 388 -2 2 1673 411 119 0 0 chrX 142683117 142683184 -23967112 + (TA)n Simple_repeat Simple_repeat 1 67 0 2 1673 374 294 131 89 chrX 142683940 142684213 -23966083 - MTE2a LTR MaLR -128 251 1 2 1673 1128 323 49 29 chrX 142684228 142684742 -23965554 - Lx8 LINE L1 -861 6612 6089 2 1673 5275 133 64 0 chrX 142684914 142685771 -23964525 - Lx2 LINE L1 -2 6995 6084 2 1673 336 366 0 0 chrX 142686854 142686966 -23963330 + ID_B1 SINE B4 104 215 -9 2 1673 331 271 115 38 chrX 142687921 142688078 -23962218 - L1MEf LINE L1 -5225 975 807 2 1673 331 264 11 11 chrX 142688120 142688208 -23962088 + Lx8 LINE L1 6563 6650 -823 2 1673 2021 239 40 28 chrX 142688238 142688733 -23961563 - Lx9 LINE L1 -893 6751 6251 2 1673 798 202 0 0 chrX 142688825 142688998 -23961298 + (TA)n Simple_repeat Simple_repeat 2 174 0 2 1673 21 36 0 0 chrX 142689161 142689189 -23961107 + AT_rich Low_complexity Low_complexity 1 28 0 2 1673 5135 196 70 51 chrX 142689965 142691214 -23959082 + Lx5 LINE L1 5778 7050 0 2 1673 407 113 14 0 chrX 142691504 142691575 -23958721 + (TATG)n Simple_repeat Simple_repeat 4 75 0 2 1673 310 312 46 39 chrX 142691680 142691810 -23958486 - L1MEf LINE L1 -6017 183 53 2 1673 210 282 27 40 chrX 142692973 142693047 -23957249 + B2_Mm1t SINE B2 6 78 -115 2 1673 351 0 0 0 chrX 142693215 142693254 -23957042 + (GA)n Simple_repeat Simple_repeat 2 40 0 2 1673 351 0 0 0 chrX 142693254 142693293 -23957003 + (GAA)n Simple_repeat Simple_repeat 3 41 0 2 1673 1241 80 0 6 chrX 142693293 142693469 -23956827 + (AGGGGG)n Simple_repeat Simple_repeat 5 179 0 2 1673 369 0 0 0 chrX 142693472 142693513 -23956783 + (GGAGA)n Simple_repeat Simple_repeat 1 41 0 2 1673 312 27 0 0 chrX 142693572 142693609 -23956687 + (TC)n Simple_repeat Simple_repeat 2 38 0 2 1673 261 0 0 0 chrX 142693609 142693637 -23956659 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1673 826 265 21 53 chrX 142693954 142694197 -23956099 + ORR1D1 LTR MaLR 132 366 -8 2 1673 22 35 0 0 chrX 142694200 142694229 -23956067 + AT_rich Low_complexity Low_complexity 1 29 0 2 1673 444 333 81 13 chrX 142694517 142694751 -23955545 - Lx8 LINE L1 -218 7255 7006 2 1673 227 276 12 73 chrX 142695252 142695334 -23954962 + MT2B2 LTR ERVL 165 241 -343 2 1673 417 278 41 0 chrX 142695271 142695368 -23954928 + PB1D10 SINE Alu 17 117 0 2 1673 21 36 0 0 chrX 142695652 142695680 -23954616 + AT_rich Low_complexity Low_complexity 1 28 0 2 1673 501 289 31 22 chrX 142696485 142696708 -23953588 + L1MEc LINE L1 524 748 -5652 2 1673 405 0 0 0 chrX 142696762 142696807 -23953489 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 1673 270 39 38 38 chrX 142697009 142697062 -23953234 + (TTTTTG)n Simple_repeat Simple_repeat 1 53 0 2 1673 610 270 0 0 chrX 142697062 142697199 -23953097 - B1_Mus2 SINE Alu -6 141 5 2 1673 279 357 40 103 chrX 142697287 142697462 -23952834 - RSINE1 SINE B4 0 165 2 2 1673 2446 180 49 40 chrX 142697582 142698138 -23952158 + RLTR31_Mm LTR ERVK 1 561 0 2 1673 1910 190 79 50 chrX 142698363 142698906 -23951390 - RLTR31_Mm LTR ERVK 0 561 3 2 1673 26 0 0 0 chrX 142700570 142700596 -23949700 + AT_rich Low_complexity Low_complexity 1 26 0 2 1673 1540 336 64 9 chrX 142700792 142701432 -23948864 + Lx8 LINE L1 6562 7236 -237 2 1673 29 47 0 0 chrX 142701481 142701524 -23948772 + AT_rich Low_complexity Low_complexity 1 43 0 2 1673 244 188 71 48 chrX 142701694 142701778 -23948518 - L1MEf LINE L1 -5422 778 693 2 1673 6153 57 15 2 chrX 142701942 142702727 -23947569 - L1Md_F2 LINE L1 -12 6570 5776 2 1673 245 119 0 92 chrX 142703173 142703238 -23947058 + T-rich Low_complexity Low_complexity 3 61 0 2 1673 378 0 0 0 chrX 142703306 142703348 -23946948 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1673 240 35 0 0 chrX 142703393 142703422 -23946874 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 2 1673 250 304 0 68 chrX 142703488 142703562 -23946734 - RSINE1 SINE B4 -12 153 85 3 1673 420 105 0 0 chrX 142704309 142704385 -23945911 + (A)n Simple_repeat Simple_repeat 1 76 0 3 1673 1313 89 10 5 chrX 142704581 142704783 -23945513 - L1Md_F2 LINE L1 -2 6580 6378 3 1673 3515 62 0 5 chrX 142704791 142705232 -23945064 + L1Md_F2 LINE L1 5928 6366 -216 3 1673 300 242 48 0 chrX 142706727 142706744 -23943552 + ORR1B1-int LTR MaLR 625 647 -862 3 1673 843 82 0 0 chrX 142706744 142706854 -23943442 + B1_Mus2 SINE Alu 1 110 -37 3 1673 322 50 0 0 chrX 142707220 142707260 -23943036 - L1_Mus3 LINE L1 -465 6173 6134 3 1673 3552 81 14 0 chrX 142707260 142707744 -23942552 + L1_Mus3 LINE L1 6142 6632 -6 3 1673 315 71 0 0 chrX 142707790 142707832 -23942464 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 3 1673 180 244 21 43 chrX 142708220 142708267 -23942029 + L3b LINE CR1 173 218 -264 3 1673 365 331 56 32 chrX 142709033 142709158 -23941138 + RSINE1 SINE B4 2 129 -36 3 1673 267 270 0 100 chrX 142709624 142709694 -23940602 - ID4_ SINE ID -3 80 18 3 1673 21 0 0 0 chrX 142709989 142710010 -23940286 + AT_rich Low_complexity Low_complexity 1 21 0 3 1673 195 184 0 0 chrX 142710850 142710888 -23939408 + (TAGA)n Simple_repeat Simple_repeat 3 40 0 3 1673 207 0 0 0 chrX 142711305 142711328 -23938968 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3 1673 1003 242 68 52 chrX 142711372 142711681 -23938615 - MTD LTR MaLR -105 314 1 3 1673 201 116 23 23 chrX 142711681 142711725 -23938571 + A-rich Low_complexity Low_complexity 4 47 0 3 1673 7982 33 26 0 chrX 142712018 142712989 -23937307 - L1Md_F2 LINE L1 0 6582 5587 3 1673 441 0 0 0 chrX 142714398 142714447 -23935849 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 1673 901 293 60 20 chrX 142714655 142715003 -23935293 + MER95 LTR ERV 10 371 -60 3 1673 1482 137 161 28 chrX 142715022 142715209 -23935087 + RMER17C LTR ERVK 1 218 -192 3 1673 348 24 0 0 chrX 142715209 142715250 -23935046 + (TTCTC)n Simple_repeat Simple_repeat 1 41 0 3 1673 420 20 0 0 chrX 142715251 142715300 -23934996 + (TCTCCC)n Simple_repeat Simple_repeat 6 54 0 3 1673 1482 137 161 28 chrX 142715300 142715346 -23934950 + RMER17C LTR ERVK 219 262 -148 3 1673 378 0 0 0 chrX 142715346 142715388 -23934908 + (CTATA)n Simple_repeat Simple_repeat 1 42 0 3 1673 1482 137 161 28 chrX 142715388 142715511 -23934785 + RMER17C LTR ERVK 263 407 -3 3 1673 1123 97 0 41 chrX 142715614 142715786 -23934510 - B2_Mm2 SINE B2 -29 166 2 3 1673 3622 81 87 21 chrX 142715871 142716400 -23933896 + LTRIS2 LTR ERV1 1 564 0 3 1673 5346 200 56 44 chrX 142717440 142718907 -23931389 + L1_Rod LINE L1 1540 3024 -2823 3 1673 7347 110 39 1 chrX 142719577 142720704 -23929592 + Lx3_Mus LINE L1 5838 7007 -2 3 1673 1404 221 60 24 chrX 142720849 142721316 -23928980 + L1_Rod LINE L1 3017 3500 -2347 3 1673 180 0 0 0 chrX 142721321 142721341 -23928955 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 1673 1424 247 44 29 chrX 142721387 142721863 -23928433 + Lx9 LINE L1 7162 7644 0 3 1673 272 239 0 11 chrX 142722026 142722119 -23928177 + Lx9 LINE L1 7552 7643 -1 3 1673 183 272 22 100 chrX 142723428 142723518 -23926778 + L3 LINE CR1 2134 2216 -2273 3 1673 257 278 14 0 chrX 142723870 142723942 -23926354 - BC1_Mm scRNA scRNA -55 97 25 3 1673 27 29 0 0 chrX 142724278 142724312 -23925984 + AT_rich Low_complexity Low_complexity 1 34 0 3 1673 299 119 0 0 chrX 142724331 142724390 -23925906 - Lx3A LINE L1 -64 6917 6859 3 1673 25 0 0 0 chrX 142724782 142724807 -23925489 + AT_rich Low_complexity Low_complexity 1 25 0 3 1673 225 208 0 0 chrX 142724843 142724915 -23925381 + (TA)n Simple_repeat Simple_repeat 2 73 0 3 1673 531 112 0 0 chrX 142725362 142725460 -23924836 + (TAGA)n Simple_repeat Simple_repeat 1 98 0 3 1673 444 99 0 0 chrX 142725819 142725890 -23924406 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 1673 39 68 0 0 chrX 142726146 142726220 -23924076 + AT_rich Low_complexity Low_complexity 1 74 0 3 1673 278 87 22 0 chrX 142727593 142727639 -23922657 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 3 1673 440 350 64 64 chrX 142727884 142728198 -23922098 - RLTR25A LTR ERVK -789 314 1 3 1673 275 212 0 183 chrX 142728214 142728318 -23921978 - RLTR25B LTR ERVK -185 843 759 3 1673 2942 199 119 42 chrX 142728346 142729086 -23921210 - RLTR25B LTR ERVK -209 819 23 3 1673 455 323 56 17 chrX 142729105 142729338 -23920958 - Lx8 LINE L1 -239 7234 6993 3 1673 182 98 0 47 chrX 142729349 142729392 -23920904 + (TCTCTG)n Simple_repeat Simple_repeat 4 44 0 3 1673 269 215 10 41 chrX 142729472 142729525 -23920771 + A-rich Low_complexity Low_complexity 2 52 0 3 1673 180 0 0 0 chrX 142729525 142729545 -23920751 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1673 269 215 10 41 chrX 142729545 142729588 -23920708 + A-rich Low_complexity Low_complexity 53 95 0 3 1673 1711 179 0 3 chrX 142730758 142731066 -23919230 + L1Md_F LINE L1 261 567 -5952 3 1673 3358 108 16 8 chrX 142731067 142731570 -23918726 + L1Md_F2 LINE L1 6064 6570 -12 3 1673 6030 78 21 2 chrX 142731760 142732553 -23917743 + RLTR13C2 LTR ERVK 1 808 0 3 1673 27 0 0 0 chrX 142733441 142733468 -23916828 + AT_rich Low_complexity Low_complexity 1 27 0 3 1673 6323 67 4 6 chrX 142733527 142734351 -23915945 - L1Md_F2 LINE L1 -12 6570 5749 3 1673 21 0 0 0 chrX 142734865 142734886 -23915410 + AT_rich Low_complexity Low_complexity 1 21 0 3 1673 253 374 8 52 chrX 142734989 142735139 -23915157 - MIRm SINE MIR -62 206 63 3 1673 1008 117 0 0 chrX 142735534 142735688 -23914608 + (TTCC)n Simple_repeat Simple_repeat 4 157 0 3 1673 327 104 0 0 chrX 142735689 142735737 -23914559 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 3 1673 1946 156 0 3 chrX 142735783 142736092 -23914204 - Lx3C LINE L1 -168 6808 6501 3 1673 4860 135 29 0 chrX 142736086 142736850 -23913446 - L1_Mur1 LINE L1 -7 5879 5094 3 1673 1351 243 31 9 chrX 142736850 142737202 -23913094 + MTD LTR MaLR 58 419 0 3 1674 218 75 50 0 chrX 142737627 142737667 -23912629 + (TTATA)n Simple_repeat Simple_repeat 4 45 0 3 1674 23 68 0 0 chrX 142737947 142737991 -23912305 + AT_rich Low_complexity Low_complexity 1 44 0 3 1674 995 318 50 31 chrX 142738232 142739033 -23911263 - L1_Mur3 LINE L1 -699 5598 4753 3 1674 430 306 158 29 chrX 142739024 142739297 -23910999 + Lx8 LINE L1 6800 7107 -366 3 1674 188 67 33 0 chrX 142739537 142739567 -23910729 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1674 495 226 62 39 chrX 142740338 142740467 -23909829 + B3A SINE B2 1 132 -66 3 1674 2004 46 0 0 chrX 142740467 142740706 -23909590 - L1Md_F2 LINE L1 -755 5827 5589 3 1674 5230 71 4 3 chrX 142740706 142741394 -23908902 + L1Md_F2 LINE L1 5892 6580 -2 3 1674 320 322 0 0 chrX 142741428 142741515 -23908781 + B3 SINE B2 122 208 -8 3 1674 343 338 113 26 chrX 142741747 142742127 -23908169 - HERV16-int LTR ERVL -4581 415 3 3 1674 331 337 101 12 chrX 142742142 142742310 -23907986 - LTR16A LTR ERVL -13 438 256 3 1674 37956 46 0 3 chrX 142743917 142750415 -23899881 - L1Md_T LINE L1 -2 6583 8 3 1674 2478 215 33 12 chrX 142750704 142751279 -23899017 - Lx9 LINE L1 -60 7584 6998 3 1674 342 331 95 14 chrX 142752658 142752805 -23897491 - MER57E2 LTR ERV1 0 402 244 3 1674 564 230 80 25 chrX 142753354 142753555 -23896741 - Lx7 LINE L1 0 7696 7485 3 1674 1603 192 127 8 chrX 142754300 142754947 -23895349 + L1_Mur1 LINE L1 864 1595 -2317 3 1674 238 345 43 17 chrX 142755503 142755618 -23894678 + MTE2a LTR MaLR 256 373 -6 3 1674 288 77 0 0 chrX 142755632 142755671 -23894625 + (TTTTA)n Simple_repeat Simple_repeat 5 43 0 3 1674 1080 90 7 0 chrX 142755672 142755817 -23894479 - B1_Mus1 SINE Alu -1 147 2 3 1674 30 27 0 0 chrX 142755907 142755944 -23894352 + AT_rich Low_complexity Low_complexity 1 37 0 3 1674 233 326 45 110 chrX 142755944 142755963 -23894333 + ID_B1 SINE B4 80 223 0 3 1674 370 302 37 67 chrX 142755963 142756098 -23894198 + B1F2 SINE Alu 19 149 0 3 1674 348 260 29 48 chrX 142757404 142757509 -23892787 + PB1 SINE Alu 23 125 -2 3 1674 564 320 50 0 chrX 142757515 142757715 -23892581 + B3 SINE B2 1 210 -6 3 1674 211 383 10 21 chrX 142758513 142758609 -23891687 + PB1D10 SINE Alu 1 95 -22 3 1674 459 0 0 0 chrX 142760999 142761050 -23889246 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 1674 356 376 13 0 chrX 142761186 142761343 -23888953 + RSINE1 SINE B4 3 161 -4 3 1674 443 268 24 71 chrX 142761391 142761560 -23888736 + RSINE1 SINE B4 2 162 -3 3 1674 989 181 6 0 chrX 142762462 142762628 -23887668 + MTC LTR MaLR 202 368 -53 3 1674 311 318 18 0 chrX 142762698 142762808 -23887488 - MIR SINE MIR -37 225 114 3 1674 9259 82 2 11 chrX 142763123 142765135 -23885161 - L1Md_F2 LINE L1 0 6582 4589 3 1674 4286 166 15 37 chrX 142765113 142766137 -23884159 - L1Md_F2 LINE L1 -4456 1427 446 3 1674 23 0 0 0 chrX 142766449 142766472 -23883824 + AT_rich Low_complexity Low_complexity 1 23 0 3 1674 303 28 0 0 chrX 142767033 142767069 -23883227 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 1674 220 325 12 24 chrX 142767124 142767206 -23883090 + L2b LINE L2 3306 3424 -2 3 1674 827 340 7 82 chrX 142767843 142768259 -23882037 + MLT1B LTR MaLR 6 390 0 3 1674 3099 67 177 2 chrX 142768391 142768827 -23881469 + RLTR1B LTR ERV1 1 512 0 3 1674 859 276 41 15 chrX 142769219 142769727 -23880569 + L1_Mur3 LINE L1 858 1379 -4501 3 1674 1505 234 278 14 chrX 142769726 142769973 -23880323 + Lx7 LINE L1 5567 5910 -1786 3 1674 933 58 0 0 chrX 142769973 142770093 -23880203 + (TA)n Simple_repeat Simple_repeat 2 121 0 3 1674 1505 278 91 51 chrX 142770093 142770632 -23879664 + Lx7 LINE L1 5911 6470 -1226 3 1674 394 252 108 7 chrX 142770657 142770805 -23879491 + Lx7 LINE L1 7156 7318 -378 3 1674 1097 229 25 11 chrX 142770943 142771295 -23879001 + Lx9 LINE L1 7205 7637 -7 3 1674 257 217 0 28 chrX 142771331 142771402 -23878894 + Lx7 LINE L1 7611 7679 -17 3 1674 1089 254 132 21 chrX 142771479 142772049 -23878247 + L1MA6 LINE L1 5317 5949 -351 3 1674 487 299 74 12 chrX 142772063 142772320 -23877976 + L1MA6 LINE L1 6004 6276 -24 3 1674 1097 89 7 0 chrX 142772489 142772635 -23877661 + B1_Mus1 SINE Alu 2 148 0 3 1674 336 77 0 0 chrX 142772636 142772688 -23877608 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 3 1674 685 189 83 0 chrX 142773049 142773181 -23877115 + B1_Mur3 SINE Alu 1 143 -6 3 1674 290 26 26 0 chrX 142773183 142773222 -23877074 + (TAAAA)n Simple_repeat Simple_repeat 3 42 0 4 1674 549 269 8 0 chrX 142773989 142774108 -23876188 + B3A SINE B2 1 120 -78 4 1674 6315 110 41 7 chrX 142774810 142775761 -23874535 - RLTR13C1 LTR ERVK 0 983 1 4 1674 498 33 0 0 chrX 142776546 142776606 -23873690 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1674 361 364 116 17 chrX 142776644 142777125 -23873171 + Lx8 LINE L1 6939 7467 -6 4 1674 412 240 10 0 chrX 142777818 142777914 -23872382 + Lx3C LINE L1 6878 6974 -2 4 1674 44 46 0 0 chrX 142777914 142777979 -23872317 + AT_rich Low_complexity Low_complexity 1 65 0 4 1674 1160 174 130 0 chrX 142777979 142778249 -23872047 - Lx9 LINE L1 -35 7609 7305 4 1674 951 282 93 12 chrX 142778350 142778673 -23871623 - Lx6 LINE L1 -26 7434 7086 4 1674 213 65 0 0 chrX 142778747 142778778 -23871518 + (TTA)n Simple_repeat Simple_repeat 2 32 0 4 1674 42 36 0 0 chrX 142778785 142778841 -23871455 + AT_rich Low_complexity Low_complexity 1 56 0 4 1674 739 88 23 40 chrX 142778842 142778848 -23871448 + (TA)n Simple_repeat Simple_repeat 2 7 0 4 1674 1705 163 59 96 chrX 142778848 142779256 -23871040 + RLTR9C LTR ERVK 1 393 0 4 1674 739 88 23 40 chrX 142779256 142779426 -23870870 + (TA)n Simple_repeat Simple_repeat 2 169 0 4 1674 1711 268 65 133 chrX 142780208 142781100 -23869196 + RLTR22_Mur LTR ERVK 2 832 -1016 4 1674 732 279 110 144 chrX 142781162 142781859 -23868437 + RLTR22_Mur LTR ERVK 750 1552 -296 4 1674 1495 59 0 21 chrX 142781930 142782121 -23868175 - B2_Mm1a SINE B2 -5 188 2 4 1674 21 0 0 0 chrX 142782307 142782328 -23867968 + AT_rich Low_complexity Low_complexity 1 21 0 4 1674 515 299 66 5 chrX 142782383 142782581 -23867715 + B3 SINE B2 1 210 -6 4 1674 217 75 50 0 chrX 142783767 142783807 -23866489 + (TCCC)n Simple_repeat Simple_repeat 3 44 0 4 1674 28 61 0 0 chrX 142784584 142784633 -23865663 + AT_rich Low_complexity Low_complexity 1 49 0 4 1674 1537 77 14 0 chrX 142784721 142784941 -23865355 + L1Md_F3 LINE L1 6360 6582 -2 4 1674 356 226 94 40 chrX 142785091 142785246 -23865050 - MER34 LTR ERV1 -2 540 452 4 1674 311 167 0 0 chrX 142786119 142786173 -23864123 + B4 SINE B4 8 61 -231 4 1674 255 345 12 0 chrX 142786196 142786280 -23864016 + B4 SINE B4 125 209 -83 4 1674 524 111 0 36 chrX 142786290 142786402 -23863894 + (TAA)n Simple_repeat Simple_repeat 1 108 0 4 1674 574 347 52 0 chrX 142787092 142787265 -23863031 + B3 SINE B2 1 182 -34 4 1674 324 210 48 48 chrX 142787277 142787402 -23862894 + Lx6 LINE L1 7310 7434 -26 4 1674 35461 43 1 3 chrX 142788012 142793009 -23857287 + L1Md_T LINE L1 616 5589 -297 4 1674 8946 7 0 0 chrX 142793009 142794030 -23856266 + L1Md_T LINE L1 5590 6585 0 4 1674 381 187 0 0 chrX 142795014 142795089 -23855207 + (TA)n Simple_repeat Simple_repeat 2 76 0 4 1674 269 356 19 69 chrX 142795089 142795249 -23855047 - RMER12 LTR ERVK -471 851 700 4 1674 304 319 0 21 chrX 142795256 142795349 -23854947 - RSINE1 SINE B4 0 165 75 4 1674 1104 166 28 24 chrX 142795430 142795498 -23854798 - L1_Mur2 LINE L1 -1175 4702 4630 4 1674 207 0 0 0 chrX 142795498 142795521 -23854775 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1674 1104 166 28 24 chrX 142795521 142795699 -23854597 - L1_Mur2 LINE L1 -1248 4629 4456 4 1674 216 0 0 0 chrX 142795790 142795814 -23854482 + (CCA)n Simple_repeat Simple_repeat 3 26 0 4 1674 267 54 0 0 chrX 142795814 142795851 -23854445 + (CAA)n Simple_repeat Simple_repeat 1 37 0 4 1674 6422 147 8 10 chrX 142795851 142796602 -23853694 + L1_Mur2 LINE L1 4672 5427 -450 4 1674 4433 89 20 93 chrX 142796602 142797409 -23852887 - RMER17A LTR ERVK -3 748 1 4 1674 6422 147 8 10 chrX 142797409 142797723 -23852573 + L1_Mur2 LINE L1 5428 5735 -142 4 1674 1192 145 3 7 chrX 142797717 142797986 -23852310 + L1_Mur2 LINE L1 1149 1417 -4460 4 1674 183 42 0 0 chrX 142798006 142798030 -23852266 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1674 1009 245 139 35 chrX 142798226 142798565 -23851731 + ORR1D1 LTR MaLR 1 374 0 4 1674 21 0 0 0 chrX 142798925 142798946 -23851350 + AT_rich Low_complexity Low_complexity 1 21 0 4 1674 1017 303 135 12 chrX 142799470 142799797 -23850499 - MTE2a LTR MaLR -9 370 4 4 1674 189 0 0 0 chrX 142800512 142800533 -23849763 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1674 1694 303 68 23 chrX 142800991 142801745 -23848551 + MER4B-int LTR ERV1 3335 3938 -2820 4 1674 372 321 249 20 chrX 142801813 142802118 -23848178 - Lx8 LINE L1 -2 7471 7097 4 1674 1313 148 28 28 chrX 142802464 142802714 -23847582 + Lx3B LINE L1 6714 6963 -10 4 1674 405 0 0 0 chrX 142802726 142802771 -23847525 + (TAA)n Simple_repeat Simple_repeat 1 45 0 4 1674 225 326 120 20 chrX 142802866 142802966 -23847330 + MER57C2 LTR ERV1 48 157 -277 4 1674 207 0 0 0 chrX 142803080 142803103 -23847193 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4 1674 1115 131 84 9 chrX 142803116 142803192 -23847104 - Lx2 LINE L1 0 6997 6922 4 1674 198 0 0 0 chrX 142803192 142803214 -23847082 + (TCCCC)n Simple_repeat Simple_repeat 4 25 0 4 1674 1115 131 84 9 chrX 142803214 142803352 -23846944 - Lx2 LINE L1 -76 6921 6768 4 1674 452 255 12 2 chrX 142803451 142803559 -23846737 + B1F2 SINE Alu 3 111 -38 4 1674 4376 131 24 1 chrX 142804776 142805433 -23844863 + RMER19A LTR ERVK 1 672 -65 4 1674 2449 296 56 25 chrX 142805980 142806836 -23843460 + Lx9 LINE L1 6472 7354 -290 4 1674 198 0 0 0 chrX 142807077 142807099 -23843197 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 1674 4542 163 46 44 chrX 142807099 142808621 -23841675 - L1Md_F LINE L1 -1977 1840 300 4 1674 554 315 14 18 chrX 142809128 142809345 -23840951 - B3 SINE B2 0 216 1 4 1674 7630 87 4 1 chrX 142809453 142811247 -23839049 - L1_Mus1 LINE L1 0 6567 4812 4 1674 1017 239 101 114 chrX 142813819 142814197 -23836099 - ORR1C1 LTR MaLR 0 378 6 4 1674 7879 63 2 4 chrX 142814283 142815453 -23834843 - L1Md_F2 LINE L1 -2 6580 5414 4 1674 21 36 0 0 chrX 142815455 142815483 -23834813 + AT_rich Low_complexity Low_complexity 1 28 0 4 1674 1323 35 0 34 chrX 142815781 142815958 -23834338 + L1Md_F3 LINE L1 6400 6570 -14 4 1674 25 31 0 0 chrX 142815981 142816013 -23834283 + AT_rich Low_complexity Low_complexity 1 32 0 4 1674 27 0 0 0 chrX 142816530 142816557 -23833739 + AT_rich Low_complexity Low_complexity 1 27 0 4 1674 23 78 0 0 chrX 142817330 142817381 -23832915 + AT_rich Low_complexity Low_complexity 1 51 0 4 1674 26 0 0 0 chrX 142817990 142818016 -23832280 + AT_rich Low_complexity Low_complexity 1 26 0 4 1674 370 305 135 26 chrX 142818119 142818421 -23831875 - ORR1E LTR MaLR 0 379 1 4 1674 728 84 244 0 chrX 142818994 142819113 -23831183 + B1_Mus1 SINE Alu 1 148 0 4 1674 805 145 20 55 chrX 142819409 142819555 -23830741 - B1_Mus1 SINE Alu -6 142 2 4 1674 300 304 41 20 chrX 142819670 142819894 -23830402 - L1ME1 LINE L1 -1858 5927 5695 4 1674 1335 72 39 0 chrX 142819993 142820174 -23830122 - B2_Mm2 SINE B2 -7 188 1 4 1674 202 338 65 0 chrX 142821035 142821112 -23829184 - MIR SINE MIR -77 131 50 4 1674 1133 167 69 17 chrX 142822818 142823049 -23827247 - Lx2 LINE L1 -2 6995 6753 4 1674 7044 30 2 0 chrX 142823281 142824114 -23826182 + L1Md_F3 LINE L1 5747 6581 -3 4 1674 23 0 0 0 chrX 142824191 142824214 -23826082 + AT_rich Low_complexity Low_complexity 1 23 0 4 1674 1284 141 36 0 chrX 142824214 142824434 -23825862 - Lx3B LINE L1 -2 6971 6744 4 1674 26 30 0 0 chrX 142824812 142824845 -23825451 + AT_rich Low_complexity Low_complexity 1 33 0 4 1674 714 189 10 133 chrX 142825060 142825255 -23825041 + ORR1C2 LTR MaLR 1 171 -213 4 1674 567 0 0 0 chrX 142825255 142825318 -23824978 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 1674 854 300 66 9 chrX 142825420 142825753 -23824543 + Lx9 LINE L1 7107 7458 -186 4 1674 378 0 0 0 chrX 142825753 142825795 -23824501 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1674 351 65 0 0 chrX 142825795 142825841 -23824455 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1674 363 247 65 2 chrX 142825841 142825953 -23824343 + Lx8 LINE L1 7330 7427 -46 4 1674 891 239 62 105 chrX 142826179 142826404 -23823892 + Lx7 LINE L1 7320 7527 -169 4 1674 693 262 0 0 chrX 142826404 142826553 -23823743 - B1_Mur4 SINE Alu 0 150 2 4 1674 891 239 62 105 chrX 142826553 142826630 -23823666 + Lx7 LINE L1 7528 7593 -103 4 1674 2994 191 61 38 chrX 142826630 142827307 -23822989 - RLTR17 LTR ERVK 0 692 1 4 1674 891 239 62 105 chrX 142827307 142827392 -23822904 + Lx7 LINE L1 7594 7691 -5 4 1674 15521 65 2 0 chrX 142827390 142829399 -23820897 + L1Md_F2 LINE L1 3573 5586 -297 4 1674 8048 42 5 1 chrX 142829399 142830387 -23819909 + L1Md_F2 LINE L1 5587 6578 -4 4 1674 324 102 0 0 chrX 142830464 142830513 -23819783 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1674 710 212 15 47 chrX 142831240 142831417 -23818879 + RLTR16 LTR ERVK 6 179 -389 4 1674 14461 24 0 0 chrX 142831428 142833804 -23816492 - L1Md_T LINE L1 0 6582 4207 4 1674 351 0 0 0 chrX 142833814 142833853 -23816443 + (TTTTC)n Simple_repeat Simple_repeat 1 39 0 4 1674 1143 119 0 0 chrX 142833856 142834032 -23816264 + (TCTCC)n Simple_repeat Simple_repeat 5 180 0 4 1674 393 22 0 0 chrX 142834032 142834077 -23816219 + (TTTTC)n Simple_repeat Simple_repeat 5 50 0 4 1674 1180 189 151 27 chrX 142834077 142834376 -23815920 + RLTR16 LTR ERVK 160 495 -10 4 1674 492 283 62 14 chrX 142834680 142834888 -23815408 - Tigger5 DNA MER2_type -36 2370 2153 4 1674 492 349 72 5 chrX 142834881 142835074 -23815222 - Tigger5 DNA MER2_type -2156 250 45 4 1674 1731 112 7 25 chrX 142835516 142835801 -23814495 + L1_Mus3 LINE L1 6359 6638 0 4 1674 2383 40 3 0 chrX 142836488 142836785 -23813511 + IAPEY2_LTR LTR ERVK 60 357 0 4 1674 378 0 0 0 chrX 142836927 142836969 -23813327 + (TTA)n Simple_repeat Simple_repeat 2 43 0 4 1674 1150 57 0 0 chrX 142836971 142837112 -23813184 - B1_Mm SINE Alu -6 141 1 4 1674 438 136 0 0 chrX 142837294 142837375 -23812921 + (GGAA)n Simple_repeat Simple_repeat 3 83 0 4 1674 403 238 97 30 chrX 142837407 142837541 -23812755 - Lx9 LINE L1 -799 6845 6703 4 1674 699 236 7 0 chrX 142837584 142837724 -23812572 - Lx9 LINE L1 -916 6728 6588 4 1674 1464 233 194 12 chrX 142837723 142838363 -23811933 + Lx9 LINE L1 6888 7644 0 4 1674 6010 176 28 21 chrX 142838675 142839873 -23810423 - Lx2B LINE L1 -5 6995 5790 5 1674 5809 127 5 10 chrX 142839895 142840818 -23809478 - Lx LINE L1 -1 6653 5735 5 1674 593 65 0 0 chrX 142840818 142840895 -23809401 + ORR1A2 LTR MaLR 251 327 0 5 1674 10996 141 18 59 chrX 142840897 142842943 -23807353 + ORR1A2-int LTR MaLR 2 1963 0 5 1674 2197 98 18 59 chrX 142842947 142843284 -23807012 + ORR1A2 LTR MaLR 5 327 0 5 1674 837 234 82 165 chrX 142843288 142843713 -23806583 - RLTR23 LTR ERV1 -33 397 8 5 1674 594 336 50 58 chrX 142843718 142844091 -23806205 - MTE2a LTR MaLR -45 374 1 5 1674 370 315 95 33 chrX 142845186 142845396 -23804900 + MLT1E2 LTR MaLR 36 258 -369 5 1674 245 333 54 48 chrX 142845597 142845764 -23804532 + MLT1E2 LTR MaLR 338 505 0 5 1674 261 0 0 0 chrX 142846384 142846413 -23803883 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1674 4840 44 8 7 chrX 142847115 142847713 -23802583 - L1Md_F2 LINE L1 0 6582 5984 5 1674 225 0 0 0 chrX 142849096 142849121 -23801175 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 5 1674 973 259 47 18 chrX 142849825 142850100 -23800196 - RLTR17 LTR ERVK -409 283 1 5 1674 266 285 39 31 chrX 142850879 142851006 -23799290 - MTD LTR MaLR -284 137 10 5 1674 367 399 24 36 chrX 142851687 142851934 -23798362 - MLT1A0 LTR MaLR -117 248 5 5 1674 330 320 74 44 chrX 142852275 142852504 -23797792 - Lx8 LINE L1 -103 7370 7135 5 1674 22 80 0 0 chrX 142852728 142852778 -23797518 + AT_rich Low_complexity Low_complexity 1 50 0 5 1674 228 67 0 0 chrX 142852877 142852907 -23797389 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 1674 2417 255 54 30 chrX 142853003 142853727 -23796569 - Lx7 LINE L1 -358 7338 6598 5 1674 541 300 23 29 chrX 142853712 142853887 -23796409 + Lx7 LINE L1 6403 6576 -1120 5 1674 884 185 185 0 chrX 142854772 142854961 -23795335 - URR1B DNA MER1_type 0 225 2 5 1674 634 133 0 0 chrX 142855195 142855293 -23795003 + L1_Mm LINE L1 3343 3440 -2443 5 1674 387 351 0 9 chrX 142855295 142855407 -23794889 - MER21B LTR ERV1 -558 305 195 5 1674 213 132 0 0 chrX 142855492 142855530 -23794766 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 5 1674 225 0 0 0 chrX 142855530 142855555 -23794741 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 1674 405 0 0 0 chrX 142855555 142855599 -23794697 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 1674 270 56 0 0 chrX 142856372 142856408 -23793888 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1674 282 95 0 0 chrX 142856408 142856449 -23793847 + (TATG)n Simple_repeat Simple_repeat 2 43 0 5 1674 818 336 20 8 chrX 142856697 142856949 -23793347 + B4A SINE B4 11 265 -27 5 1674 555 78 0 0 chrX 142856949 142857026 -23793270 + (CA)n Simple_repeat Simple_repeat 1 77 0 5 1674 698 308 105 45 chrX 142857653 142858102 -23792194 + RMER5 LTR ERV1 43 518 -16 5 1674 3403 95 75 0 chrX 142859600 142860103 -23790193 - L1_Mus3 LINE L1 -1 6637 6097 5 1674 21 0 0 0 chrX 142860147 142860168 -23790128 + AT_rich Low_complexity Low_complexity 1 21 0 5 1674 476 282 199 24 chrX 142860383 142860594 -23789702 - MLT1A1 LTR MaLR -33 375 128 5 1674 383 311 0 8 chrX 142860703 142860826 -23789470 - L1M5 LINE L1 -2887 3259 3138 5 1674 413 346 105 67 chrX 142860834 142861178 -23789118 + ORR1E LTR MaLR 3 359 0 5 1674 187 328 79 36 chrX 142861370 142861509 -23788787 + MIRb SINE MIR 104 248 -20 5 1674 23 0 0 0 chrX 142861708 142861731 -23788565 + AT_rich Low_complexity Low_complexity 1 23 0 5 1674 218 81 0 26 chrX 142861793 142861831 -23788465 + (TAA)n Simple_repeat Simple_repeat 3 39 0 5 1674 3797 195 85 44 chrX 142861911 142862797 -23787499 - Lx2B LINE L1 -19 6981 6060 5 1674 253 128 0 0 chrX 142862797 142862836 -23787460 + Lx2B LINE L1 6011 6049 -951 5 1674 182 128 0 25 chrX 142862993 142863033 -23787263 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 5 1674 1021 129 0 0 chrX 142863037 142863192 -23787104 + Lx3B LINE L1 6134 6288 -693 5 1674 3587 167 2 13 chrX 142863192 142863792 -23786504 + RLTR17 LTR ERVK 1 593 -99 5 1674 294 164 0 18 chrX 142863786 142863842 -23786454 + RLTR31_Mm LTR ERVK 500 554 -7 5 1674 3699 134 85 19 chrX 142863848 142864496 -23785800 + Lx3B LINE L1 6281 6971 -2 5 1674 240 372 33 0 chrX 142866472 142866593 -23783703 - L2a LINE L2 -4 3422 3298 5 1674 198 378 122 0 chrX 142866771 142866869 -23783427 - L2a LINE L2 -299 3127 3018 5 1674 33 0 0 0 chrX 142867618 142867651 -23782645 + AT_rich Low_complexity Low_complexity 1 33 0 5 209 182 326 0 0 chrX 142868432 142868481 -23781815 + L2b LINE L2 3321 3369 -6 5 1675 23 33 0 0 chrX 142869327 142869357 -23780939 + AT_rich Low_complexity Low_complexity 1 30 0 5 1675 7180 136 5 70 chrX 142869704 142871488 -23778808 - L1_Mus3 LINE L1 0 6638 4933 5 1675 1495 81 9 0 chrX 142871488 142871699 -23778597 + L1_Mus2 LINE L1 6354 6566 0 5 1675 5578 171 4 161 chrX 142871699 142872125 -23778171 - L1_Mus3 LINE L1 -951 4932 4659 5 1675 11194 141 14 19 chrX 142873500 142875486 -23774810 - L1Md_F2 LINE L1 -655 5927 3953 5 1675 7060 159 16 28 chrX 142875636 142877090 -23773206 - Lx3C LINE L1 -1007 5969 4547 5 1675 661 65 19 0 chrX 142877325 142877432 -23772864 - L1Md_F2 LINE L1 0 6582 6474 5 1675 32373 112 17 16 chrX 142878462 142884799 -23765497 - L1Md_F2 LINE L1 0 6582 242 5 1675 2183 286 95 14 chrX 142885135 142885999 -23764297 - RCHARR1 DNA MER1_type -15 959 26 5 1675 193 250 105 23 chrX 142886070 142886156 -23764140 + MIRc SINE MIR 18 110 -158 5 1675 34 24 0 0 chrX 142886339 142886380 -23763916 + AT_rich Low_complexity Low_complexity 1 41 0 5 1675 615 186 112 21 chrX 142886557 142886700 -23763596 - MTC LTR MaLR -198 223 68 5 1675 3830 94 8 0 chrX 142886714 142887244 -23763052 - L1_Mus2 LINE L1 -4 6562 6029 5 1675 4740 100 3 1 chrX 142887248 142887929 -23762367 - L1_Mm LINE L1 -92 5791 5110 5 1675 4116 102 7 0 chrX 142887923 142888513 -23761783 + L1_Mm LINE L1 4485 5078 -805 5 1675 413 145 39 13 chrX 142888515 142888592 -23761704 - MTC LTR MaLR -341 80 2 5 1675 596 59 12 0 chrX 142888969 142889054 -23761242 + (TC)n Simple_repeat Simple_repeat 1 86 0 5 1675 207 162 0 0 chrX 142889058 142889095 -23761201 + (CATATA)n Simple_repeat Simple_repeat 6 42 0 5 1675 1123 75 0 7 chrX 142890017 142890164 -23760132 + B1_Mus2 SINE Alu 1 146 -1 5 1675 194 0 0 37 chrX 142890165 142890192 -23760104 + (CAAAAA)n Simple_repeat Simple_repeat 4 29 0 5 1675 451 246 182 28 chrX 142890705 142890881 -23759415 - B3 SINE B2 -7 209 7 5 1675 305 217 0 24 chrX 142890898 142890983 -23759313 + (TCTCTG)n Simple_repeat Simple_repeat 2 84 0 5 1675 187 103 0 49 chrX 142890988 142891029 -23759267 + CT-rich Low_complexity Low_complexity 2 40 0 5 1675 339 401 40 28 chrX 142891338 142891515 -23758781 - LTR81C LTR ERV1? -833 320 142 5 1675 597 64 0 0 chrX 142891577 142891655 -23758641 + (TCTA)n Simple_repeat Simple_repeat 2 79 0 5 1675 183 162 0 0 chrX 142892113 142892150 -23758146 + T-rich Low_complexity Low_complexity 1 37 0 5 1675 917 279 175 20 chrX 142892335 142892839 -23757457 - L1MB3 LINE L1 -312 5871 5290 5 1675 279 269 187 56 chrX 142892936 142893298 -23756998 - L1MB3 LINE L1 -873 5267 4859 5 1675 648 270 73 20 chrX 142893315 142893519 -23756777 + B3 SINE B2 1 215 -1 5 1675 188 191 32 0 chrX 142894136 142894199 -23756097 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 5 1675 294 151 47 9 chrX 142894201 142894308 -23755988 + (TA)n Simple_repeat Simple_repeat 1 111 0 5 1675 3473 185 31 25 chrX 142895090 142895822 -23754474 - Lx4B LINE L1 -4 7054 6318 5 1675 243 0 0 0 chrX 142896563 142896590 -23753706 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1675 331 198 49 0 chrX 142897246 142897327 -23752969 + Lx9 LINE L1 7354 7438 -206 5 1675 605 241 148 11 chrX 142898025 142898214 -23752082 - B3 SINE B2 0 216 2 5 1675 22 0 0 0 chrX 142898659 142898681 -23751615 + AT_rich Low_complexity Low_complexity 1 22 0 5 1675 21 0 0 0 chrX 142898958 142898979 -23751317 + AT_rich Low_complexity Low_complexity 1 21 0 5 1675 225 280 0 0 chrX 142898985 142899035 -23751261 + MTE2b LTR MaLR 48 97 -282 5 1675 792 287 70 23 chrX 142899036 142899293 -23751003 + MTE2b LTR MaLR 58 326 -53 5 1675 877 189 57 9 chrX 142899298 142899527 -23750769 + L1_Mur2 LINE L1 5118 5357 -520 5 1675 2640 139 20 2 chrX 142899526 142899981 -23750315 + MusHAL1 LINE L1 1106 1568 -1144 5 1675 4383 66 17 9 chrX 142899981 142900562 -23749734 + L1Md_F2 LINE L1 5985 6570 -12 5 1675 7144 130 5 3 chrX 142900562 142901730 -23748566 + L1_Mm LINE L1 1707 2877 -3006 5 1675 398 42 0 0 chrX 142901730 142901778 -23748518 + L1_Mur1 LINE L1 5505 5552 -334 5 1675 1087 109 0 0 chrX 142902669 142902816 -23747480 + B1_Mus1 SINE Alu 2 148 0 5 1675 207 170 0 0 chrX 142902819 142902866 -23747430 + A-rich Low_complexity Low_complexity 1 47 0 5 1675 14571 109 15 1 chrX 142902916 142905740 -23744556 - L1_Mus2 LINE L1 -5 6561 3698 5 1675 349 360 95 57 chrX 142905766 142906049 -23744247 + MLT1F1 LTR MaLR 193 486 -83 5 1675 2158 284 58 41 chrX 142907246 142908000 -23742296 + Lx8 LINE L1 6705 7471 -2 5 1675 1665 217 80 16 chrX 142908275 142908663 -23741633 + MTC LTR MaLR 1 413 -8 5 1675 6813 209 39 7 chrX 142909538 142911116 -23739180 + L1_Mur3 LINE L1 4080 5707 -173 5 1675 1082 238 26 19 chrX 142911113 142911383 -23738913 + Lx6 LINE L1 6465 6736 -724 5 1675 777 128 0 0 chrX 142911383 142911508 -23738788 + (GAAA)n Simple_repeat Simple_repeat 4 128 0 5 1675 308 314 0 0 chrX 142911511 142911613 -23738683 + L1MB7 LINE L1 5894 5995 -189 5 1675 2176 304 39 72 chrX 142912088 142913027 -23737269 + Lx5 LINE L1 6143 7050 0 5 1675 814 265 121 9 chrX 142913213 142913544 -23736752 + ORR1D2 LTR MaLR 1 368 -2 5 1675 694 312 103 14 chrX 142913669 142914231 -23736065 - L1M3 LINE L1 -1767 4373 3734 5 1675 425 264 14 0 chrX 142914610 142914758 -23735538 - Lx9 LINE L1 -18 7626 7477 5 1675 348 141 40 40 chrX 142914770 142914844 -23735452 + ORR1B1 LTR MaLR 1 74 -255 5 1675 7347 82 5 3 chrX 142914858 142916122 -23734174 - L1_Mus2 LINE L1 0 6566 5302 5 1675 623 223 197 75 chrX 142916122 142916335 -23733961 + ORR1B1 LTR MaLR 45 283 -46 5 1675 743 87 227 0 chrX 142916338 142916488 -23733808 + MusHAL1 LINE L1 2141 2324 -388 5 1675 4499 56 5 3 chrX 142916541 142917118 -23733178 - L1Md_F2 LINE L1 0 6582 6005 5 1675 4078 80 78 0 chrX 142917297 142917871 -23732425 - L1Md_F2 LINE L1 0 6582 5964 6 1675 312 107 0 18 chrX 142917871 142917928 -23732368 + MusHAL1 LINE L1 2312 2367 -345 5 1675 312 272 47 81 chrX 142918000 142918148 -23732148 - MIR SINE MIR -109 153 11 6 1675 5509 68 3 10 chrX 142918847 142919575 -23730721 + L1_Mus1 LINE L1 5845 6567 0 6 1675 201 176 0 0 chrX 142919578 142919612 -23730684 + A-rich Low_complexity Low_complexity 1 34 0 6 1675 249 109 0 0 chrX 142919731 142919777 -23730519 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1675 25 31 0 0 chrX 142919912 142919944 -23730352 + AT_rich Low_complexity Low_complexity 1 32 0 6 1675 384 146 0 0 chrX 142921144 142921233 -23729063 + (T)n Simple_repeat Simple_repeat 1 89 0 6 1675 433 300 0 8 chrX 142922403 142922524 -23727772 + MER94 DNA AcHobo 1 120 -14 6 1675 246 333 0 11 chrX 142922615 142922703 -23727593 - MLT1C LTR MaLR -15 452 366 6 1675 312 345 70 18 chrX 142922786 142923013 -23727283 - HAL1 LINE L1 -904 1603 1365 6 1675 26 88 0 0 chrX 142923418 142923486 -23726810 + AT_rich Low_complexity Low_complexity 1 68 0 6 1675 33217 89 5 5 chrX 142923491 142929529 -23720767 - L1Md_F2 LINE L1 -13 6569 533 6 1675 4406 103 28 6 chrX 142929529 142930172 -23720124 + L1Md_F2 LINE L1 5925 6581 -1 6 1675 16340 111 23 8 chrX 142930172 142931679 -23718617 + Lx3A LINE L1 3269 4787 -1099 6 1675 1103 68 7 7 chrX 142931679 142931814 -23718482 + B1_Mm SINE Alu 1 136 -11 6 1675 330 26 0 0 chrX 142931814 142931853 -23718443 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 6 1675 1103 68 7 7 chrX 142931853 142931864 -23718432 + B1_Mm SINE Alu 137 147 0 6 1675 16340 111 23 8 chrX 142931864 142932838 -23717458 + Lx3A LINE L1 4788 5762 -124 6 1675 2302 70 13 0 chrX 142932838 142933153 -23717143 + L1Md_F2 LINE L1 6264 6582 0 6 1675 16340 116 26 8 chrX 142933153 142933273 -23717023 + Lx3A LINE L1 5760 5906 -1075 6 1675 925 111 7 13 chrX 142933273 142933428 -23716868 + (GAAA)n Simple_repeat Simple_repeat 3 156 0 6 1675 8285 132 38 8 chrX 142933428 142934473 -23715823 + Lx3A LINE L1 5907 6964 -17 6 1675 360 0 0 0 chrX 142934473 142934513 -23715783 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 6 1675 8285 132 38 8 chrX 142934513 142934527 -23715769 + Lx3A LINE L1 6965 6978 -3 6 1675 29466 93 8 66 chrX 142934631 142941123 -23709173 - L1Md_F2 LINE L1 -12 6570 480 6 1675 439 149 0 0 chrX 142941123 142941197 -23709099 - L1VL1 LINE L1 -6348 74 1 6 1675 8163 146 110 6 chrX 142941198 142943924 -23706372 - L1_Mur1 LINE L1 -2603 3280 15 6 1675 677 294 17 11 chrX 142944236 142944415 -23705881 + B3 SINE B2 16 195 -21 6 1675 677 181 7 0 chrX 142944430 142944568 -23705728 + GA-rich Low_complexity Low_complexity 2 140 0 6 1675 708 257 185 3 chrX 142944569 142944920 -23705376 - L1M3 LINE L1 -1875 4265 3851 6 1675 4731 140 28 8 chrX 142944953 142945287 -23705009 - L1_Mm LINE L1 -294 5589 5244 6 1675 189 0 0 0 chrX 142945287 142945308 -23704988 + (TA)n Simple_repeat Simple_repeat 2 22 0 6 1675 4731 140 28 8 chrX 142945308 142945766 -23704530 - L1_Mm LINE L1 -640 5243 4783 6 1675 744 336 49 23 chrX 142945776 142946163 -23704133 - MLT1D LTR MaLR -9 496 100 6 1675 36 23 0 0 chrX 142946301 142946344 -23703952 + AT_rich Low_complexity Low_complexity 1 43 0 6 1675 228 154 0 0 chrX 142946716 142946768 -23703528 + A-rich Low_complexity Low_complexity 1 52 0 6 1675 441 350 0 0 chrX 142947077 142947217 -23703079 - RSINE1 SINE B4 -21 144 5 6 1675 231 265 0 0 chrX 142947248 142947297 -23702999 + ID4 SINE ID 18 66 -17 6 1675 297 298 125 37 chrX 142947297 142947433 -23702863 - RMER15 LTR ERVL 0 575 428 6 1675 710 275 38 10 chrX 142947893 142948102 -23702194 + ORR1D2 LTR MaLR 10 224 -146 6 1675 375 80 67 0 chrX 142948108 142948183 -23702113 + (TTTG)n Simple_repeat Simple_repeat 4 83 0 6 1675 1002 88 7 0 chrX 142948189 142948336 -23701960 - B1_Mus1 SINE Alu 0 148 1 6 1675 498 268 48 8 chrX 142948336 142948447 -23701849 + ORR1D2 LTR MaLR 255 370 0 6 1675 638 338 46 32 chrX 142948708 142948924 -23701372 + MTEa LTR MaLR 2 227 -152 6 1675 1271 89 28 0 chrX 142948924 142949103 -23701193 - B2_Mm2 SINE B2 -10 185 2 6 1675 638 338 46 32 chrX 142949103 142949259 -23701037 + MTEa LTR MaLR 228 379 0 6 1675 2680 151 25 121 chrX 142949691 142950454 -23699842 - RMER17A2 LTR ERVK 0 906 291 6 1675 189 0 0 0 chrX 142950454 142950475 -23699821 + (TG)n Simple_repeat Simple_repeat 1 21 0 6 1675 450 0 0 0 chrX 142950475 142950524 -23699772 + (GA)n Simple_repeat Simple_repeat 1 50 0 6 1675 2580 176 21 199 chrX 142950524 142950825 -23699471 - RMER17A2 LTR ERVK -599 290 2 6 1675 991 269 98 18 chrX 142950958 142951295 -23699001 + Lx6 LINE L1 7088 7451 -9 6 1675 1451 276 30 0 chrX 142951511 142951880 -23698416 - Lx9 LINE L1 -668 6976 6597 6 1675 1480 278 87 40 chrX 142951876 142952473 -23697823 + Lx9 LINE L1 6972 7596 -48 6 1675 604 205 20 0 chrX 142952512 142952663 -23697633 + Lx2A1 LINE L1 6850 7003 -5 6 1675 279 0 0 0 chrX 142952806 142952837 -23697459 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1675 707 160 6 0 chrX 142952837 142953012 -23697284 + GA-rich Low_complexity Low_complexity 1 176 0 6 1675 482 129 25 33 chrX 142953187 142953307 -23696989 - L1_Mus4 LINE L1 0 6636 6518 6 1675 576 297 251 41 chrX 142953341 142953783 -23696513 + Lx8 LINE L1 6246 6780 -693 6 1675 213 65 0 0 chrX 142953785 142953816 -23696480 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1675 357 299 7 7 chrX 142954724 142954859 -23695437 - RCHARR1 DNA MER1_type 0 974 840 6 1675 300 297 7 32 chrX 142954867 142954967 -23695329 - PB1D9 SINE Alu -44 105 2 6 1675 1763 249 144 12 chrX 142954969 142955717 -23694579 - RCHARR1 DNA MER1_type -124 850 4 6 1675 680 289 118 59 chrX 142955885 142956556 -23693740 + Lx9 LINE L1 5707 6534 -1110 6 1675 453 19 0 0 chrX 142956594 142956648 -23693648 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1675 234 0 0 0 chrX 142956648 142956673 -23693623 + (GA)n Simple_repeat Simple_repeat 1 26 0 6 1675 1966 236 49 31 chrX 142956673 142957123 -23693173 - MT2A LTR ERVL -75 458 1 6 1675 2603 276 94 58 chrX 142957125 142957599 -23692697 + Lx9 LINE L1 6533 7003 -641 6 1675 182 37 0 36 chrX 142957599 142957627 -23692669 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1675 702 0 0 0 chrX 142957631 142957709 -23692587 + (TTC)n Simple_repeat Simple_repeat 1 78 0 6 1675 2603 276 94 58 chrX 142957709 142958302 -23691994 + Lx9 LINE L1 7004 7644 0 6 1675 530 239 0 0 chrX 142958340 142958453 -23691843 + PB1D9 SINE Alu 3 115 -5 6 1675 586 42 0 0 chrX 142958455 142958526 -23691770 + (GGGA)n Simple_repeat Simple_repeat 1 71 0 6 1675 773 156 0 39 chrX 142958526 142958706 -23691590 + GA-rich Low_complexity Low_complexity 4 176 0 6 1675 1104 186 63 180 chrX 142958813 142959207 -23691089 + ORR1B1 LTR MaLR 39 386 -8 6 1675 223 354 0 0 chrX 142959856 142959952 -23690344 - MIRb SINE MIR -72 196 101 6 1675 251 306 110 10 chrX 142960597 142960696 -23689600 + B1_Mus1 SINE Alu 1 108 -9 6 1675 25 0 0 0 chrX 142960869 142960894 -23689402 + AT_rich Low_complexity Low_complexity 1 25 0 6 1675 267 31 0 0 chrX 142960946 142960978 -23689318 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 1675 2603 101 27 0 chrX 142962936 142963302 -23686994 + Lx3A LINE L1 6557 6932 -49 6 1675 545 326 174 40 chrX 142963958 142964606 -23685690 + MER21B LTR ERV1 1 736 -127 6 1675 254 208 21 0 chrX 142964646 142964694 -23685602 + MER21B LTR ERV1 704 752 -111 6 1675 3738 102 23 11 chrX 142964966 142965528 -23684768 - L1_Mur1 LINE L1 -635 5251 4683 6 1675 7059 126 16 11 chrX 142965534 142966667 -23683629 + Lx3B LINE L1 5831 6968 -5 6 1675 22 35 0 0 chrX 142966675 142966704 -23683592 + AT_rich Low_complexity Low_complexity 1 29 0 6 1675 402 308 68 53 chrX 142966709 142966915 -23683381 + B3 SINE B2 5 213 -3 6 1675 212 200 15 0 chrX 142968141 142968206 -23682090 + (TA)n Simple_repeat Simple_repeat 1 66 0 6 1675 5453 230 76 22 chrX 142968460 142968612 -23681684 + Lx9 LINE L1 6159 6349 -1295 6 1675 357 24 0 0 chrX 142968621 142968663 -23681633 + (TC)n Simple_repeat Simple_repeat 1 42 0 6 1675 1075 77 0 27 chrX 142968663 142968799 -23681497 - B1_Mus1 SINE Alu -12 136 1 6 1675 5453 230 76 22 chrX 142968799 142970055 -23680241 + Lx9 LINE L1 6350 7643 -1 6 1675 324 271 0 0 chrX 142970843 142970913 -23679383 - ID4 SINE ID -11 72 3 6 1675 528 272 107 18 chrX 142970914 142971195 -23679101 - L1MA8 LINE L1 -31 6260 5955 6 1675 411 118 0 0 chrX 142971217 142971293 -23679003 + (TG)n Simple_repeat Simple_repeat 2 77 0 6 1675 464 350 21 7 chrX 142971294 142971435 -23678861 - B3A SINE B2 -51 147 5 6 1675 614 268 90 22 chrX 142971448 142971726 -23678570 - L1MA8 LINE L1 -352 5939 5643 6 1675 382 269 9 9 chrX 142972291 142972407 -23677889 - L1MA8 LINE L1 -671 5641 5526 6 1675 537 16 0 0 chrX 142973352 142973414 -23676882 + (TG)n Simple_repeat Simple_repeat 2 63 0 6 1675 213 315 14 14 chrX 142973642 142973716 -23676580 + PB1D10 SINE Alu 42 115 -2 6 1675 1101 75 0 26 chrX 142973885 142974023 -23676273 + B1_Mus1 SINE Alu 2 139 -9 6 1675 207 0 0 0 chrX 142974023 142974046 -23676250 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1675 1101 75 0 26 chrX 142974046 142974058 -23676238 + B1_Mus1 SINE Alu 140 148 0 6 1675 4761 202 46 21 chrX 142974218 142975292 -23675004 - Lx4B LINE L1 0 7058 5959 6 1675 498 33 0 0 chrX 142975297 142975357 -23674939 + (TC)n Simple_repeat Simple_repeat 2 61 0 6 1675 1434 92 29 10 chrX 142975397 142975606 -23674690 - L1_Mus1 LINE L1 0 6567 6355 6 1675 1278 78 0 0 chrX 142975606 142975772 -23674524 + L1Md_F2 LINE L1 5978 6143 -439 6 1675 2425 59 13 0 chrX 142975768 142976072 -23674224 + L1Md_F2 LINE L1 5596 5903 -679 6 1675 3999 173 99 125 chrX 142976064 142976851 -23673445 - Lx4B LINE L1 -1085 5973 5081 6 1675 2137 39 0 0 chrX 142976851 142977107 -23673189 + L1Md_T LINE L1 6325 6580 -2 6 1675 3999 170 108 140 chrX 142977107 142977645 -23672651 - Lx4B LINE L1 -797 5080 4681 6 1675 252 333 0 12 chrX 142978172 142978254 -23672042 + MLT1D LTR MaLR 110 190 -315 6 1675 3478 25 0 0 chrX 142978386 142978782 -23671514 + MTA_Mm LTR MaLR 1 396 0 6 1675 215 395 0 0 chrX 142979131 142979212 -23671084 + L2a LINE L2 3331 3411 -15 6 1675 296 267 104 52 chrX 142979718 142979872 -23670424 - RSINE1 SINE B4 0 165 4 6 1675 323 198 370 18 chrX 142980757 142980837 -23669459 - Lx9 LINE L1 -21 7623 7484 6 1675 216 111 0 0 chrX 142980837 142980873 -23669423 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1675 323 198 370 18 chrX 142980873 142980957 -23669339 - Lx9 LINE L1 -161 7483 7401 6 1675 461 307 91 39 chrX 142981347 142981601 -23668695 + Lx7 LINE L1 6962 7228 -468 6 1675 213 178 0 0 chrX 142982173 142982218 -23668078 + T-rich Low_complexity Low_complexity 1 45 0 6 1675 234 273 0 0 chrX 142984380 142984435 -23665861 + GA-rich Low_complexity Low_complexity 1 55 0 6 1675 2500 31 56 0 chrX 142985306 142985626 -23664670 - ORR1A0 LTR MaLR -8 338 1 6 1675 417 20 0 0 chrX 142987661 142987711 -23662585 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1675 2869 81 10 2 chrX 142988096 142988493 -23661803 + MTB LTR MaLR 1 400 0 7 1675 423 68 34 0 chrX 142988493 142988552 -23661744 - Lx4A LINE L1 -403 6655 6595 7 1675 229 205 63 13 chrX 142988827 142988906 -23661390 - Lx9 LINE L1 -152 7492 7410 7 1675 1096 214 9 5 chrX 142989549 142989770 -23660526 + URR1B DNA MER1_type 4 225 0 7 1675 186 347 53 0 chrX 142990068 142990143 -23660153 + L2a LINE L2 3343 3421 -5 7 1675 452 85 0 0 chrX 142990597 142990656 -23659640 - L1_Mus1 LINE L1 -482 6085 6027 7 1675 3460 78 23 11 chrX 142990656 142991132 -23659164 + L1_Mus1 LINE L1 6083 6564 -3 7 1675 224 0 65 0 chrX 142991135 142991166 -23659130 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 7 1675 333 234 83 21 chrX 142991359 142991455 -23658841 + BC1_Mm scRNA scRNA 17 118 -34 7 1675 1941 140 27 0 chrX 142992693 142993021 -23657275 + Lx LINE L1 6304 6640 -14 7 1675 2668 81 3 3 chrX 142993555 142993914 -23656382 - L1_Mus2 LINE L1 0 6566 6208 7 1675 31 44 0 0 chrX 142994682 142994727 -23655569 + AT_rich Low_complexity Low_complexity 1 45 0 7 1675 1385 301 82 22 chrX 142995864 142996696 -23653600 + L1M2 LINE L1 4096 4977 -1166 7 1675 1255 280 12 36 chrX 142996695 142997098 -23653198 + Lx6 LINE L1 6659 7376 -84 7 1675 898 301 68 40 chrX 142997163 142997695 -23652601 + L1_Mur3 LINE L1 5281 5827 -53 7 1675 207 0 0 0 chrX 142998287 142998310 -23651986 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1675 341 337 118 91 chrX 142998428 142998800 -23651496 + MLT1A1 LTR MaLR 25 406 -2 7 1675 252 75 0 0 chrX 142998809 142998849 -23651447 - Lx3_Mus LINE L1 -820 6189 6150 7 209 5628 88 29 0 chrX 142998849 142999644 -23650652 + Lx3_Mus LINE L1 6187 7004 -5 7 1676 1083 92 0 0 chrX 143000086 143000239 -23650057 + (TTTC)n Simple_repeat Simple_repeat 2 154 0 1 1676 640 129 0 35 chrX 143000246 143000390 -23649906 - L1_Mus4 LINE L1 -4 6632 6494 2 1676 1720 80 4 0 chrX 143000390 143000616 -23649680 + L1_Mus3 LINE L1 6130 6356 -282 3 1676 549 103 0 10 chrX 143000616 143000714 -23649582 + L1_Mus3 LINE L1 6540 6636 -2 3 1676 826 97 7 20 chrX 143001021 143001169 -23649127 + RMER17B LTR ERVK 318 463 -495 4 1676 1640 45 10 0 chrX 143001285 143001487 -23648809 + L1_Mus2 LINE L1 5901 6104 -462 5 1676 420 309 8 75 chrX 143001535 143001668 -23648628 + RSINE1 SINE B4 42 165 0 6 1676 833 321 68 15 chrX 143001851 143002515 -23647781 - L1MC4 LINE L1 -453 7589 6891 7 1676 381 203 26 33 chrX 143002667 143002820 -23647476 + GA-rich Low_complexity Low_complexity 3 154 0 8 1676 25 0 0 0 chrX 143003020 143003045 -23647251 + AT_rich Low_complexity Low_complexity 1 25 0 9 1676 375 283 117 54 chrX 143003316 143003555 -23646741 - Zaphod2 DNA Tip100 -1756 1768 1515 1 1676 566 294 66 15 chrX 143003629 143003888 -23646408 - Zaphod2 DNA Tip100 -2807 717 446 1 1676 470 298 155 23 chrX 143004693 143004951 -23645345 + B4A SINE B4 1 292 0 1 1676 459 95 0 0 chrX 143004960 143005034 -23645262 + (CAGAGA)n Simple_repeat Simple_repeat 6 79 0 1 1676 5146 46 5 2 chrX 143005282 143005915 -23644381 - L1Md_F2 LINE L1 -3 6579 5945 1 1676 2259 19 0 0 chrX 143005915 143006173 -23644123 + L1Md_F2 LINE L1 5638 5895 -687 1 1676 1046 305 118 6 chrX 143006277 143006331 -23643965 - MTE2b LTR MaLR -12 367 313 1 1676 327 25 0 0 chrX 143006331 143006371 -23643925 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1 1676 1046 305 118 6 chrX 143006371 143006646 -23643650 - MTE2b LTR MaLR -67 312 2 1 1676 347 217 0 68 chrX 143006722 143006796 -23643500 - B1_Mur4 SINE Alu -78 72 4 1 1676 423 0 0 0 chrX 143006900 143006947 -23643349 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1676 217 269 179 0 chrX 143007502 143007569 -23642727 - ID_B1 SINE B4 -70 154 76 1 1676 197 132 0 26 chrX 143008282 143008321 -23641975 + A-rich Low_complexity Low_complexity 2 39 0 1 1676 378 328 0 16 chrX 143008676 143008797 -23641499 - B3 SINE B2 -97 119 1 2 1676 397 320 62 6 chrX 143008802 143008981 -23641315 - MER2B DNA MER2_type -124 212 24 2 1676 558 0 0 0 chrX 143009325 143009387 -23640909 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 1676 378 57 0 0 chrX 143009387 143009439 -23640857 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1676 287 25 25 0 chrX 143010273 143010313 -23639983 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 1676 438 20 0 0 chrX 143010313 143010363 -23639933 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1676 3487 20 2 0 chrX 143010662 143011057 -23639239 + MTA_Mm LTR MaLR 1 396 0 2 1676 727 301 15 0 chrX 143011384 143011587 -23638709 + B3 SINE B2 1 206 -10 2 1676 527 215 185 9 chrX 143013042 143013253 -23637043 + Lx9 LINE L1 7389 7636 -8 2 1676 2006 205 2 58 chrX 143013629 143014074 -23636222 + RMER19B LTR ERVK 1 420 -482 2 1676 1129 185 2 22 chrX 143014063 143014334 -23635962 + RMER19B LTR ERVK 571 902 0 2 1676 318 227 0 26 chrX 143014531 143014608 -23635688 + MER34A LTR ERV1 1 75 -496 3 1676 5149 116 37 0 chrX 143014610 143015928 -23634368 + L1Md_F2 LINE L1 348 1721 -4162 3 1676 7894 89 5 3 chrX 143015911 143017020 -23633276 + L1Md_F2 LINE L1 4004 5114 -769 3 1676 38060 11 1 7 chrX 143017019 143022284 -23628012 + L1Md_A LINE L1 357 5586 -297 3 1676 8836 13 0 0 chrX 143022284 143023280 -23627016 + L1Md_A LINE L1 5587 6582 0 3 1676 7063 76 10 10 chrX 143023280 143024678 -23625618 + L1Md_F2 LINE L1 5099 6481 -101 3 1676 183 80 0 0 chrX 143024678 143024703 -23625593 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 3 1676 7063 80 24 6 chrX 143024703 143024758 -23625538 + L1Md_F2 LINE L1 6482 6557 -25 3 1676 2926 102 11 7 chrX 143024766 143025200 -23625096 + L1Md_F2 LINE L1 5144 5579 -304 3 1676 7271 83 3 5 chrX 143025213 143026197 -23624099 + L1Md_F2 LINE L1 5587 6568 -14 3 1676 422 326 80 58 chrX 143026319 143026771 -23623525 + MER34A LTR ERV1 64 542 0 3 1676 763 244 71 15 chrX 143027357 143027553 -23622743 - ORR1C2 LTR MaLR -6 378 172 3 1676 291 114 0 0 chrX 143027556 143027600 -23622696 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1676 645 167 0 0 chrX 143027603 143027729 -23622567 + GA-rich Low_complexity Low_complexity 3 128 0 3 1676 711 258 15 99 chrX 143027729 143027931 -23622365 - ORR1C2 LTR MaLR -187 187 3 3 1676 2455 195 80 8 chrX 143028007 143028534 -23621762 - RLTR12A LTR ERVK -3 565 1 3 1676 569 309 83 88 chrX 143029876 143030046 -23620250 + B3A SINE B2 4 173 -22 3 1676 558 67 0 0 chrX 143030046 143030121 -23620175 + (TC)n Simple_repeat Simple_repeat 2 76 0 4 1676 186 103 0 0 chrX 143030122 143030151 -23620145 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1676 243 309 83 88 chrX 143030151 143030170 -23620126 + B2_Mm2 SINE B2 174 192 -3 3 1676 565 279 24 69 chrX 143030401 143030647 -23619649 + MER67C LTR ERV1 122 356 -355 4 1676 183 299 91 0 chrX 143030954 143031031 -23619265 + L2a LINE L2 3338 3421 -5 4 1676 7971 101 17 5 chrX 143031228 143033182 -23617114 + L1VL2 LINE L1 173 2150 -1465 4 1676 210 118 0 0 chrX 143033188 143033222 -23617074 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 1676 677 134 0 43 chrX 143035775 143035892 -23614404 - ORR1A1 LTR MaLR -79 267 156 4 1676 11928 165 16 15 chrX 143035893 143038193 -23612103 + L1_Mur1 LINE L1 2442 4745 -1141 4 1676 325 301 35 26 chrX 143038284 143038400 -23611896 + MTD LTR MaLR 18 134 -285 4 1676 525 231 181 0 chrX 143038629 143038789 -23611507 + Lx9 LINE L1 7229 7417 -227 4 1676 303 245 124 31 chrX 143038863 143038960 -23611336 - B3A SINE B2 -84 114 9 5 1676 691 269 100 66 chrX 143038972 143039155 -23611141 + MTD LTR MaLR 152 346 -73 4 1676 2117 117 6 41 chrX 143039155 143039494 -23610802 + ORR1A2 LTR MaLR 1 327 0 5 1676 691 269 100 66 chrX 143039494 143039569 -23610727 + MTD LTR MaLR 347 419 0 4 1676 231 279 0 32 chrX 143040595 143040658 -23609638 - MARNA DNA Mariner -360 226 166 5 1676 192 227 67 22 chrX 143040838 143040883 -23609413 - L3 LINE CR1 -1288 3201 3155 5 1676 275 296 79 30 chrX 143040892 143040993 -23609303 + MARNA DNA Mariner 464 569 -17 5 1676 22 35 0 0 chrX 143041346 143041375 -23608921 + AT_rich Low_complexity Low_complexity 1 29 0 5 1676 1305 59 18 0 chrX 143041999 143042168 -23608128 - L1_Mus1 LINE L1 -2 6565 6394 5 1676 291 302 131 9 chrX 143042168 143042275 -23608021 - B1F SINE Alu -20 129 10 5 1676 374 261 162 28 chrX 143042272 143042414 -23607882 - RCHARR1 DNA MER1_type -592 382 222 5 1676 1513 282 109 26 chrX 143042651 143043227 -23607069 - Lx8 LINE L1 -657 6816 6193 5 1676 476 329 23 40 chrX 143043437 143043611 -23606685 - RCHARR1 DNA MER1_type -778 196 26 5 1676 202 321 173 9 chrX 143043757 143043867 -23606429 + MIRm SINE MIR 9 136 -140 6 1676 181 250 68 0 chrX 143044176 143044220 -23606076 - MIRm SINE MIR -192 84 38 6 1676 180 152 0 0 chrX 143045345 143045378 -23604918 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 6 1676 203 217 17 0 chrX 143045575 143045635 -23604661 + CT-rich Low_complexity Low_complexity 4 64 0 6 1676 4376 190 91 21 chrX 143045757 143046718 -23603578 + RLTR25B LTR ERVK 1 1028 0 6 1676 189 0 0 0 chrX 143047414 143047435 -23602861 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 1676 333 248 289 20 chrX 143047893 143048045 -23602251 + ID_B1 SINE B4 23 215 -9 6 1676 4805 55 13 7 chrX 143048071 143048691 -23601605 - L1Md_F2 LINE L1 -12 6570 5947 6 1676 570 314 35 7 chrX 143049579 143049720 -23600576 + RSINE1 SINE B4 5 149 -16 6 1676 339 44 0 0 chrX 143049727 143049772 -23600524 + (CATA)n Simple_repeat Simple_repeat 2 46 0 6 1676 21 71 0 0 chrX 143050024 143050066 -23600230 + AT_rich Low_complexity Low_complexity 1 42 0 7 1676 183 129 0 0 chrX 143050618 143050649 -23599647 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 7 1676 1900 128 10 0 chrX 143051095 143051401 -23598895 + Lx LINE L1 6346 6654 0 7 1676 312 27 0 0 chrX 143051480 143051517 -23598779 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 7 1676 183 129 0 0 chrX 143051531 143051562 -23598734 + (TAAAA)n Simple_repeat Simple_repeat 5 35 0 7 1676 3827 104 63 53 chrX 143051933 143051960 -23598336 - L1_Mur2 LINE L1 -3206 2671 2634 7 1676 567 96 0 0 chrX 143051960 143052043 -23598253 + (TG)n Simple_repeat Simple_repeat 2 84 0 7 1676 3827 104 63 53 chrX 143052043 143052725 -23597571 - L1_Mur2 LINE L1 -3244 2633 1955 7 1676 3343 159 122 55 chrX 143052720 143053391 -23596905 + Lx4A LINE L1 6343 7058 0 7 1676 926 138 20 7 chrX 143053475 143053621 -23596675 - Lx LINE L1 -161 6493 6346 7 1676 230 336 23 76 chrX 143054434 143054450 -23595846 + B4A SINE B4 82 127 -165 7 1676 322 224 33 76 chrX 143054450 143054542 -23595754 + B1_Mur2 SINE Alu 13 100 -49 8 1676 230 336 23 76 chrX 143054542 143054566 -23595730 + B4A SINE B4 128 206 -86 7 1676 1055 101 0 0 chrX 143054688 143054836 -23595460 + B1_Mus1 SINE Alu 1 148 0 8 1676 235 203 31 0 chrX 143054836 143054900 -23595396 + (TAAA)n Simple_repeat Simple_repeat 4 69 0 8 1676 1072 107 0 0 chrX 143054926 143055085 -23595211 - L1_Mus1 LINE L1 0 6567 6409 8 1676 688 314 19 8 chrX 143055109 143055366 -23594930 - Arthur1 DNA Tip100 -395 3552 3293 8 1676 232 286 86 0 chrX 143055439 143055544 -23594752 - Arthur1 DNA Tip100 -3747 200 87 8 1676 623 258 1 22 chrX 143055750 143055918 -23594378 + Lx7 LINE L1 6841 7013 -683 8 1676 4709 118 1 3 chrX 143055907 143056842 -23593454 + L1_Mus4 LINE L1 5105 6035 -601 8 1676 30 27 0 0 chrX 143057131 143057168 -23593128 + AT_rich Low_complexity Low_complexity 1 37 0 8 1676 810 64 0 0 chrX 143057262 143057371 -23592925 + (TC)n Simple_repeat Simple_repeat 2 110 0 8 1676 414 0 0 0 chrX 143057591 143057637 -23592659 + (TA)n Simple_repeat Simple_repeat 1 46 0 8 1676 22 35 0 0 chrX 143057782 143057811 -23592485 + AT_rich Low_complexity Low_complexity 1 29 0 9 1676 994 172 107 44 chrX 143057851 143057872 -23592424 - MTB_Mm LTR MaLR 0 407 378 9 1676 445 16 32 0 chrX 143057872 143057934 -23592362 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 9 1676 994 172 107 44 chrX 143057934 143058137 -23592159 - MTB_Mm LTR MaLR -30 377 170 9 1676 390 139 0 0 chrX 143058299 143058371 -23591925 + (TA)n Simple_repeat Simple_repeat 2 73 0 9 1676 247 175 0 109 chrX 143061142 143061206 -23589090 - L1MC2 LINE L1 -11 6333 6277 9 1676 317 88 0 34 chrX 143061582 143061641 -23588655 + (TCTCTG)n Simple_repeat Simple_repeat 4 60 0 9 1676 494 319 59 15 chrX 143061697 143062038 -23588258 - L1MD LINE L1 -824 5322 4967 9 1676 32 0 0 0 chrX 143062130 143062162 -23588134 + AT_rich Low_complexity Low_complexity 1 32 0 9 1676 222 37 0 0 chrX 143062379 143062406 -23587890 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 9 1676 242 394 0 28 chrX 143062553 143062660 -23587636 - L2 LINE L2 -528 2891 2788 9 1676 459 0 0 0 chrX 143062804 143062855 -23587441 + (TAAA)n Simple_repeat Simple_repeat 4 54 0 1 1676 938 247 78 42 chrX 143063352 143063737 -23586559 + L1MA8 LINE L1 5708 6106 -185 1 1676 180 0 0 0 chrX 143064022 143064042 -23586254 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 1676 7394 55 9 5 chrX 143064194 143065126 -23585170 - L1Md_F2 LINE L1 -4 6578 5644 1 1676 389 300 109 0 chrX 143065138 143065248 -23585048 - Lx8 LINE L1 -188 7285 7164 1 1676 767 90 0 88 chrX 143065446 143065710 -23584586 + L1_Mus1 LINE L1 6445 6567 0 1 1676 270 0 0 0 chrX 143065794 143065824 -23584472 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1676 6478 143 35 15 chrX 143067169 143068262 -23582034 + Lx4A LINE L1 5940 7054 -4 1 1676 216 0 0 0 chrX 143068599 143068623 -23581673 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 1 1676 851 168 65 55 chrX 143068629 143068830 -23581466 - Lx7 LINE L1 0 7696 7494 1 1676 440 290 0 30 chrX 143069159 143069294 -23581002 - MIR SINE MIR -14 248 118 1 1676 5455 199 56 95 chrX 143070027 143070772 -23579524 - Lx4B LINE L1 -39 7019 6272 1 1676 423 0 0 0 chrX 143070772 143070819 -23579477 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 1 1676 316 183 12 0 chrX 143070819 143070888 -23579408 - B2_Mm2 SINE B2 -97 119 47 1 1676 5455 199 56 95 chrX 143070888 143070911 -23579385 - Lx4B LINE L1 -787 6271 6271 1 1676 985 155 53 6 chrX 143070911 143071080 -23579216 - B2_Mm1t SINE B2 -14 179 3 1 1676 5455 201 60 80 chrX 143071080 143071862 -23578434 - Lx4B LINE L1 -787 6271 5419 1 1676 2633 130 26 0 chrX 143071862 143072284 -23578012 + L1_Mus3 LINE L1 6206 6638 0 1 1676 4325 214 83 7 chrX 143072284 143072937 -23577359 - Lx4B LINE L1 -468 5418 4734 1 1676 445 193 45 27 chrX 143073964 143074076 -23576220 - RMER1C Other Other -3 1339 1226 1 1676 714 24 0 0 chrX 143074076 143074160 -23576136 + (TAAAA)n Simple_repeat Simple_repeat 2 85 0 1 1676 252 254 62 16 chrX 143074160 143074224 -23576072 - RMER1C Other Other -151 1191 1125 1 1676 423 38 0 0 chrX 143074833 143074886 -23575410 + (CTA)n Simple_repeat Simple_repeat 3 55 0 1 1676 1065 179 97 18 chrX 143075339 143075567 -23574729 - Lx4B LINE L1 -1166 4711 4466 1 1676 25 65 0 0 chrX 143075657 143075703 -23574593 + AT_rich Low_complexity Low_complexity 1 46 0 1 1676 1991 246 101 107 chrX 143075892 143076553 -23573743 - RMER19B LTR ERVK 0 902 246 1 1676 797 0 0 11 chrX 143076554 143076648 -23573648 + (TTCC)n Simple_repeat Simple_repeat 4 96 0 1 1676 501 17 0 0 chrX 143076648 143076706 -23573590 + (TC)n Simple_repeat Simple_repeat 2 59 0 1 1676 3174 132 8 2 chrX 143076736 143077220 -23573076 - Lx2 LINE L1 0 6997 6511 1 1676 724 267 64 128 chrX 143077223 143077262 -23573034 - RMER19B LTR ERVK -318 293 260 1 1676 399 72 0 0 chrX 143077262 143077331 -23572965 + Lx LINE L1 6585 6653 -1 1 1676 789 231 66 128 chrX 143077331 143077604 -23572692 - RMER19B LTR ERVK -481 256 1 1 1676 297 358 36 36 chrX 143077608 143077747 -23572549 - Lx8 LINE L1 -181 7292 7154 1 1676 363 348 72 31 chrX 143077745 143077938 -23572358 - Lx8 LINE L1 -256 7217 7017 1 1676 321 211 0 0 chrX 143077932 143077989 -23572307 - Lx8 LINE L1 -977 6496 6440 1 1676 355 248 37 8 chrX 143078156 143078290 -23572006 - L1MA4 LINE L1 -370 5930 5793 1 1676 240 275 32 21 chrX 143078291 143078384 -23571912 + L1MDa LINE L1 1938 2031 -4602 1 1676 364 143 27 54 chrX 143078387 143078415 -23571881 + HAL1-3A_ME LINE L1 1947 1973 -885 1 1676 606 319 0 6 chrX 143078415 143078576 -23571720 + RSINE1 SINE B4 5 164 -1 1 1676 364 143 27 54 chrX 143078576 143078621 -23571675 + HAL1-3A_ME LINE L1 1974 2018 -840 1 1676 180 111 0 0 chrX 143078622 143078649 -23571647 + (CATA)n Simple_repeat Simple_repeat 4 30 0 1 1676 405 298 28 7 chrX 143078759 143078901 -23571395 - B1F2 SINE Alu -1 148 4 1 1676 253 267 87 20 chrX 143079337 143079486 -23570810 + L1MDa LINE L1 2418 2576 -4057 1 1676 280 371 28 9 chrX 143079555 143079661 -23570635 + B1F1 SINE Alu 1 108 -41 1 1676 21 36 0 0 chrX 143080367 143080395 -23569901 + AT_rich Low_complexity Low_complexity 1 28 0 1 1676 458 46 0 15 chrX 143080996 143081062 -23569234 + (CAAAA)n Simple_repeat Simple_repeat 2 66 0 1 1676 1794 152 0 0 chrX 143081431 143081733 -23568563 + Lx2 LINE L1 6683 6984 -13 1 1676 333 0 0 0 chrX 143081738 143081775 -23568521 + (CATA)n Simple_repeat Simple_repeat 2 38 0 1 1676 285 146 0 0 chrX 143081964 143082012 -23568284 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 1676 3072 269 63 20 chrX 143082067 143083029 -23567267 + Lx9 LINE L1 6289 7292 -352 1 1676 180 0 0 0 chrX 143083071 143083091 -23567205 + (CATA)n Simple_repeat Simple_repeat 1 20 0 1 1676 542 275 44 0 chrX 143083115 143083297 -23566999 - Lx9 LINE L1 -199 7445 7256 1 1676 287 342 92 18 chrX 143084671 143084835 -23565461 - Lx8 LINE L1 -154 7319 7144 1 1676 1419 260 127 0 chrX 143084839 143085193 -23565103 - MTD LTR MaLR -8 411 13 1 1676 270 270 95 110 chrX 143085780 143085958 -23564338 - L1MB8 LINE L1 -22 6156 5989 1 1676 342 0 0 0 chrX 143085958 143085996 -23564300 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1 1676 921 108 47 0 chrX 143085997 143086126 -23564170 - B1_Mus2 SINE Alu -12 135 1 1 1676 270 270 95 110 chrX 143086126 143086282 -23564014 - L1MB8 LINE L1 -190 5988 5825 1 1676 402 342 39 43 chrX 143087260 143087514 -23562782 - L1MB7 LINE L1 -120 6064 5812 1 1676 27 0 0 0 chrX 143087530 143087557 -23562739 + AT_rich Low_complexity Low_complexity 1 27 0 1 1676 2480 279 90 26 chrX 143087691 143088569 -23561727 - Lx9 LINE L1 -205 7439 6506 1 1676 251 38 56 19 chrX 143089305 143089359 -23560937 + (CAAAA)n Simple_repeat Simple_repeat 4 59 0 1 1676 283 330 46 26 chrX 143090307 143090533 -23559763 - L1M4 LINE L1 -3269 2877 2647 1 1676 616 15 0 0 chrX 143090627 143090695 -23559601 + L1Md_T LINE L1 5519 5586 -297 1 1676 8284 38 0 0 chrX 143090695 143091702 -23558594 + L1Md_T LINE L1 5587 6582 0 1 1676 202 286 80 45 chrX 143092652 143092740 -23557556 - L3 LINE CR1 -199 4290 4200 1 1676 338 188 21 10 chrX 143093167 143093264 -23557032 - Lx9 LINE L1 -1 7643 7546 1 1676 345 109 0 0 chrX 143093287 143093351 -23556945 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 1676 26 50 0 0 chrX 143093788 143093828 -23556468 + AT_rich Low_complexity Low_complexity 1 40 0 1 1676 2577 183 15 48 chrX 143093966 143094507 -23555789 + RLTR28 LTR ERVL 2 524 0 1 1676 1131 298 73 124 chrX 143094955 143095231 -23555065 + L1MCa LINE L1 29 309 -6199 1 1676 893 190 130 0 chrX 143095231 143095431 -23554865 - URR1A DNA MER1_type 0 226 1 1 1676 1131 298 73 124 chrX 143095431 143095566 -23554730 + L1MCa LINE L1 310 448 -6060 1 1676 888 114 41 29 chrX 143095566 143095737 -23554559 - Lx2 LINE L1 -1 6996 6824 1 1676 1131 298 73 124 chrX 143095737 143096508 -23553788 + L1MCa LINE L1 449 1151 -5357 1 1676 1198 41 0 0 chrX 143096519 143096664 -23553632 + B1_Mm SINE Alu 1 145 -2 1 1676 395 19 0 19 chrX 143096664 143096717 -23553579 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 1 1676 2099 73 13 10 chrX 143096799 143097103 -23553193 + L1_Mus2 LINE L1 6262 6566 0 1 1676 548 286 78 7 chrX 143097169 143097440 -23552856 + L1MCa LINE L1 1466 1755 -4753 1 1676 574 270 444 0 chrX 143097647 143097890 -23552406 - Lx9 LINE L1 -670 6974 6624 1 1676 327 286 106 14 chrX 143097919 143098061 -23552235 + Lx9 LINE L1 7012 7166 -478 1 1676 1698 212 17 15 chrX 143098091 143098494 -23551802 + Lx9 LINE L1 7239 7642 -2 1 1676 962 127 6 0 chrX 143098816 143098974 -23551322 + (GA)n Simple_repeat Simple_repeat 2 160 0 1 1676 8637 150 16 21 chrX 143099046 143100750 -23549546 - Lx2B LINE L1 -265 6735 5023 1 1676 209 57 0 28 chrX 143100750 143100786 -23549510 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1676 8637 180 6 39 chrX 143100786 143101712 -23548584 - Lx2B LINE L1 -855 5022 4151 1 1676 186 282 0 0 chrX 143101965 143102004 -23548292 - L2a LINE L2 -353 3073 3035 1 1676 25 0 0 0 chrX 143102589 143102614 -23547682 + AT_rich Low_complexity Low_complexity 1 25 0 1 1676 295 349 67 49 chrX 143102747 143102970 -23547326 - MLT1C LTR MaLR -5 462 236 1 1676 237 365 47 0 chrX 143105122 143105229 -23545067 + MIRc SINE MIR 53 164 -104 1 1676 307 324 35 42 chrX 143105992 143106134 -23544162 - MLT1A1 LTR MaLR -12 396 256 1 1676 282 95 0 0 chrX 143106379 143106421 -23543875 + (A)n Simple_repeat Simple_repeat 1 42 0 1 1676 210 176 0 0 chrX 143106950 143107001 -23543295 + (TCTCTG)n Simple_repeat Simple_repeat 4 54 0 1 1676 417 333 55 28 chrX 143107098 143107243 -23543053 - RSINE1 SINE B4 -12 153 5 1 1676 783 78 0 0 chrX 143107704 143107820 -23542476 + (TG)n Simple_repeat Simple_repeat 1 116 0 1 1676 644 152 15 39 chrX 143108344 143108474 -23541822 - Lx LINE L1 -8 6646 6520 1 1676 6932 84 26 8 chrX 143108480 143109727 -23540569 - L1Md_F2 LINE L1 0 6582 5314 1 1676 810 186 7 7 chrX 143110119 143110260 -23540036 - B1_Mus1 SINE Alu -2 146 6 1 1676 245 351 62 18 chrX 143110492 143110718 -23539578 + L1M3 LINE L1 3777 4012 -2128 1 1676 3417 224 35 26 chrX 143110727 143111522 -23538774 + Lx2B LINE L1 6179 6980 -20 1 1676 446 68 0 0 chrX 143111556 143111615 -23538681 + MYSERV16_I-int LTR ERVK 1253 1311 -1015 1 1676 5038 26 2 0 chrX 143111615 143112266 -23538030 - L1Md_F3 LINE L1 -405 6179 5528 1 1676 2491 36 0 7 chrX 143112266 143112572 -23537724 + L1Md_F3 LINE L1 6269 6572 -12 1 1676 4375 158 63 52 chrX 143112604 143113433 -23536863 + MYSERV16_I-int LTR ERVK 1302 2146 -180 1 1676 1149 157 55 0 chrX 143113433 143113650 -23536646 - Lx2A1 LINE L1 -2 7006 6778 1 1676 4375 158 63 52 chrX 143113650 143113704 -23536592 + MYSERV16_I-int LTR ERVK 2147 2189 -137 1 1676 2667 154 19 10 chrX 143113704 143114189 -23536107 - Lx2 LINE L1 -1 6996 6508 1 1676 4375 158 63 52 chrX 143114189 143114283 -23536013 + MYSERV16_I-int LTR ERVK 2190 2297 -29 1 1676 194 62 0 30 chrX 143114283 143114316 -23535980 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 1676 4375 158 63 52 chrX 143114316 143114350 -23535946 + MYSERV16_I-int LTR ERVK 2298 2326 0 1 1676 878 233 80 70 chrX 143114350 143114653 -23535643 + RLTR16 LTR ERVK 1 478 -90 1 1676 189 74 0 0 chrX 143114653 143114680 -23535616 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1676 651 245 32 26 chrX 143114680 143114772 -23535524 + RLTR16 LTR ERVK 479 568 0 1 1676 376 167 22 0 chrX 143114998 143115088 -23535208 - Lx5 LINE L1 -3 7047 6956 1 1676 1110 161 68 9 chrX 143115189 143115408 -23534888 + RMER4B LTR ERVK 17 248 -337 1 1676 195 42 0 0 chrX 143115453 143115477 -23534819 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1676 436 251 84 54 chrX 143115483 143115746 -23534550 + RMER4B LTR ERVK 347 585 0 1 1676 754 39 0 19 chrX 143116026 143116130 -23534166 + (GAAA)n Simple_repeat Simple_repeat 3 104 0 1 1676 243 241 0 84 chrX 143116459 143116518 -23533778 + A-rich Low_complexity Low_complexity 1 59 0 1 1676 1636 31 0 0 chrX 143116518 143116709 -23533587 + B2_Mm1t SINE B2 2 192 -1 1 1676 243 241 0 84 chrX 143116709 143116744 -23533552 + A-rich Low_complexity Low_complexity 60 87 0 1 1676 478 276 87 52 chrX 143116761 143117070 -23533226 + L1M2 LINE L1 2397 2716 -4133 1 1676 22 0 0 0 chrX 143117103 143117125 -23533171 + AT_rich Low_complexity Low_complexity 1 22 0 1 1676 261 269 0 25 chrX 143117125 143117205 -23533091 + (TATG)n Simple_repeat Simple_repeat 2 79 0 1 1676 305 353 75 8 chrX 143117313 143117447 -23532849 - B4A SINE B4 -148 144 2 1 1676 421 272 27 7 chrX 143117702 143117850 -23532446 + L1M2 LINE L1 2871 3021 -3824 1 1676 4626 199 38 7 chrX 143117865 143118817 -23531479 + Lx5 LINE L1 5788 6768 -282 2 1676 647 269 72 29 chrX 143119430 143119637 -23530659 - B3 SINE B2 0 216 1 2 1676 232 391 8 0 chrX 143120238 143120366 -23529930 - L1MEg LINE L1 -5951 133 5 2 1676 719 265 58 133 chrX 143120814 143121175 -23529121 + RLTR12B LTR ERVK 42 375 -153 2 1676 313 274 19 19 chrX 143122445 143122549 -23527747 + L1M4 LINE L1 978 1081 -5461 2 1676 1024 225 41 64 chrX 143122987 143123253 -23527043 + ORR1D1 LTR MaLR 115 374 0 2 1676 1515 197 96 31 chrX 143123270 143123626 -23526670 - RLTR30 LTR ERV1 0 379 1 2 1676 318 314 210 9 chrX 143123828 143124162 -23526134 + L1M4 LINE L1 4057 4457 -2187 2 1676 475 29 14 14 chrX 143124207 143124277 -23526019 + (CA)n Simple_repeat Simple_repeat 2 71 0 2 1676 1021 89 7 0 chrX 143124343 143124478 -23525818 + B1_Mus1 SINE Alu 1 136 -12 2 1676 261 0 0 0 chrX 143124502 143124531 -23525765 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1676 477 0 0 0 chrX 143124541 143124594 -23525702 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 1676 996 248 158 119 chrX 143124616 143125129 -23525167 + MT2A LTR ERVL 1 533 0 2 1676 380 337 34 6 chrX 143125154 143125330 -23524966 + Lx8 LINE L1 6248 6428 -1045 2 1676 4765 136 7 27 chrX 143125331 143126188 -23524108 + L1Md_F LINE L1 496 1343 -5314 2 1676 9068 87 8 0 chrX 143126178 143127451 -23522845 + L1Md_F LINE L1 2052 3334 -2549 2 1676 5552 43 6 0 chrX 143127459 143128133 -23522163 - L1Md_F2 LINE L1 -12 6570 5893 2 1676 1057 51 0 7 chrX 143128498 143128637 -23521659 + B1_Mm SINE Alu 10 147 0 2 1676 204 0 83 0 chrX 143128638 143128674 -23521622 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1676 1125 106 25 10 chrX 143129322 143129523 -23520773 + L1_Mur3 LINE L1 3111 3314 -2566 2 1676 1972 191 140 23 chrX 143129526 143129649 -23520647 + Lx7 LINE L1 5141 5287 -593 2 1676 1022 129 0 7 chrX 143129649 143129797 -23520499 + B1_Mus2 SINE Alu 1 147 0 2 209 2409 239 75 30 chrX 143129797 143130883 -23519413 + Lx7 LINE L1 5288 7388 -308 2 1677 198 103 0 0 chrX 143130903 143130932 -23519364 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1677 622 185 18 53 chrX 143130950 143131121 -23519175 + Lx7 LINE L1 7370 7534 -162 2 1677 2136 121 15 6 chrX 143131121 143131455 -23518841 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1677 6822 46 12 7 chrX 143131457 143132303 -23517993 - IAPEz-int LTR ERVK -2 6479 5630 2 1677 14305 32 88 4 chrX 143132289 143135119 -23515177 - IAPEz-int LTR ERVK -3405 3076 8 2 1677 2123 123 15 6 chrX 143135119 143135453 -23514843 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1677 612 197 63 6 chrX 143135453 143135611 -23514685 + Lx7 LINE L1 7529 7695 -1 2 1677 26 50 0 0 chrX 143135613 143135653 -23514643 + AT_rich Low_complexity Low_complexity 1 40 0 2 1677 3986 187 92 29 chrX 143136964 143137836 -23512460 + RMER19B LTR ERVK 1 890 -12 2 1677 1979 170 112 1 chrX 143137850 143138359 -23511937 + Lx5 LINE L1 5416 5979 -1071 2 1677 1048 198 94 8 chrX 143138355 143138600 -23511696 - Lx5 LINE L1 -823 6227 5962 2 1677 8522 123 33 6 chrX 143138788 143140973 -23509323 - Lx3C LINE L1 -2 6974 4747 2 1677 201 250 174 0 chrX 143141467 143141559 -23508737 + L2a LINE L2 3318 3425 -1 2 1677 21 0 0 0 chrX 143142898 143142919 -23507377 + AT_rich Low_complexity Low_complexity 1 21 0 2 1677 2488 60 0 0 chrX 143144586 143144904 -23505392 - L1Md_A LINE L1 -1 6581 6264 2 1677 726 136 0 0 chrX 143144906 143145024 -23505272 + (GAAAA)n Simple_repeat Simple_repeat 2 119 0 2 1677 575 321 80 56 chrX 143147387 143147563 -23502733 + RMER5 LTR ERV1 45 219 -315 2 1677 1006 78 28 7 chrX 143147563 143147705 -23502591 + B1_Mus1 SINE Alu 2 146 -2 2 1677 575 321 80 56 chrX 143147705 143147865 -23502431 + RMER5 LTR ERV1 220 389 -145 2 1677 2126 142 73 11 chrX 143149043 143149413 -23500883 - Lx4A LINE L1 0 7058 6666 2 1677 422 231 0 130 chrX 143150986 143151030 -23499266 + MT2B LTR ERVL 131 154 -447 2 1677 991 110 7 20 chrX 143151030 143151178 -23499118 + B1_Mus2 SINE Alu 2 147 0 2 1677 200 59 29 0 chrX 143151178 143151212 -23499084 + (CAAAC)n Simple_repeat Simple_repeat 1 35 0 2 1677 209 250 0 0 chrX 143152294 143152350 -23497946 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 1677 353 313 7 10 chrX 143153202 143153408 -23496888 + L1M5 LINE L1 2575 2781 -3365 2 1677 373 267 138 31 chrX 143153541 143154102 -23496194 + L1M5 LINE L1 3627 4239 -1907 2 1677 350 159 14 0 chrX 143154632 143154701 -23495595 - Lx3C LINE L1 -2 6974 6905 2 1677 518 16 0 0 chrX 143154701 143154763 -23495533 + MTB LTR MaLR 339 400 0 2 1677 1442 133 5 0 chrX 143154763 143154974 -23495322 - Lx3C LINE L1 -183 6793 6582 2 1677 527 107 12 0 chrX 143155276 143155360 -23494936 + (TCC)n Simple_repeat Simple_repeat 2 86 0 2 1677 5339 26 0 0 chrX 143155971 143156591 -23493705 + L1Md_A LINE L1 5962 6581 -1 2 1677 392 317 40 47 chrX 143157229 143157378 -23492918 + Lx8 LINE L1 7169 7316 -157 2 1677 706 286 20 5 chrX 143157484 143157684 -23492612 + B3 SINE B2 5 207 -9 2 1677 378 338 32 52 chrX 143157764 143158014 -23492282 - RMER5 LTR ERV1 -72 462 218 2 1677 21 0 0 0 chrX 143158344 143158365 -23491931 + AT_rich Low_complexity Low_complexity 1 21 0 2 1677 333 230 104 44 chrX 143159085 143159267 -23491029 - L1MA9 LINE L1 -10 7262 7070 2 1677 585 231 0 0 chrX 143159267 143159414 -23490882 + (CA)n Simple_repeat Simple_repeat 2 148 0 2 1677 492 268 60 15 chrX 143159418 143159619 -23490677 - L1MA9 LINE L1 -208 7064 6855 2 1677 260 275 25 0 chrX 143159688 143159788 -23490508 - L1MA9 LINE L1 -534 6726 6619 2 1677 253 377 0 26 chrX 143159788 143159905 -23490391 + PB1D10 SINE Alu 3 116 -1 2 1677 542 299 76 143 chrX 143159941 143160347 -23489949 - MTE2a LTR MaLR 0 379 1 2 1677 539 240 78 33 chrX 143160413 143160698 -23489598 - L1MA9 LINE L1 -808 6452 6154 2 1677 639 61 51 0 chrX 143160743 143160841 -23489455 - L1_Mus2 LINE L1 -1 6565 6463 2 1677 240 209 86 17 chrX 143160928 143161045 -23489251 - L1MA9 LINE L1 -985 6118 5994 2 1677 300 270 81 37 chrX 143161041 143161337 -23488959 - L1MA9 LINE L1 -4658 2379 2071 2 1677 414 306 66 8 chrX 143161376 143161498 -23488798 + RSINE1 SINE B4 36 164 -1 2 1677 232 226 0 0 chrX 143161499 143161552 -23488744 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1677 240 377 0 0 chrX 143161604 143161673 -23488623 + tRNA-Asp-GAY tRNA tRNA 7 75 0 2 1677 257 278 0 0 chrX 143161823 143161877 -23488419 - L1MA9 LINE L1 -5230 1800 1747 2 1677 378 0 0 0 chrX 143162366 143162408 -23487888 + (T)n Simple_repeat Simple_repeat 1 42 0 2 1677 456 19 0 0 chrX 143163503 143163556 -23486740 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 1677 260 53 26 0 chrX 143163556 143163593 -23486703 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1677 1866 181 23 44 chrX 143164050 143164438 -23485858 + ORR1C2 LTR MaLR 5 384 0 2 1677 2469 94 8 6 chrX 143165637 143165990 -23484306 - L1_Mus3 LINE L1 0 6638 6285 2 1677 830 252 48 0 chrX 143166359 143166565 -23483731 - B3 SINE B2 0 216 1 2 1677 227 326 27 102 chrX 143166664 143166811 -23483485 + MIRb SINE MIR 130 265 -3 2 1677 5367 72 6 0 chrX 143168960 143169684 -23480612 - L1_Mm LINE L1 -1245 4638 3911 2 1677 822 280 96 42 chrX 143170691 143171026 -23479270 + MLT1A1 LTR MaLR 54 406 -2 2 1677 2822 82 25 3 chrX 143171680 143172072 -23478224 + L1_Mus2 LINE L1 6166 6566 0 2 1677 705 221 0 20 chrX 143173977 143174125 -23476171 + B1_Mur2 SINE Alu 3 147 -2 2 1677 2913 28 11 14 chrX 143174309 143174670 -23475626 - L1Md_F2 LINE L1 -3 6579 6220 2 1677 275 348 58 0 chrX 143174673 143174828 -23475468 + L1MC4 LINE L1 5394 5557 -2325 2 1677 21 0 0 0 chrX 143175064 143175085 -23475211 + AT_rich Low_complexity Low_complexity 1 21 0 2 1677 504 302 16 32 chrX 143175803 143175988 -23474308 + L1MC4 LINE L1 6737 6918 -1124 2 1677 271 317 91 51 chrX 143176244 143176596 -23473700 + L1MC4 LINE L1 7260 7625 -417 2 1677 22 99 0 0 chrX 143176757 143176828 -23473468 + AT_rich Low_complexity Low_complexity 1 71 0 2 1677 775 351 144 24 chrX 143177712 143178336 -23471960 - LTR82B Low_complexity ERVL -124 706 8 2 1677 267 79 0 0 chrX 143178404 143178442 -23471854 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 1677 449 63 16 0 chrX 143179062 143179125 -23471171 - L1_Mus4 LINE L1 -742 5894 5831 2 1677 4333 127 19 1 chrX 143179125 143179805 -23470491 + Lx LINE L1 5959 6650 -4 2 1677 427 269 0 0 chrX 143179825 143179933 -23470363 + Lx5 LINE L1 6940 7047 -3 2 1677 32482 102 14 16 chrX 143180036 143186465 -23463831 - L1Md_F2 LINE L1 0 6582 153 2 1677 22 0 0 0 chrX 143186508 143186530 -23463766 + AT_rich Low_complexity Low_complexity 1 22 0 2 1677 244 250 78 0 chrX 143187163 143187227 -23463069 + Lx8 LINE L1 7253 7321 -152 2 1677 2413 189 75 45 chrX 143187451 143188155 -23462141 + RMER19B LTR ERVK 3 897 -5 2 1677 731 324 56 18 chrX 143188330 143188898 -23461398 + L1M4 LINE L1 1028 1617 -4925 2 1677 264 61 0 20 chrX 143189414 143189464 -23460832 - L1_Mus4 LINE L1 -5 6631 6583 2 1677 251 314 43 0 chrX 143189464 143189534 -23460762 - RSINE1 SINE B4 -49 116 44 2 1677 421 342 8 0 chrX 143189567 143189687 -23460609 - RSINE1 SINE B4 -44 121 1 2 1677 2984 161 59 27 chrX 143190229 143190895 -23459401 + RMER6C LTR ERVK 2 688 -2 2 1677 396 0 0 0 chrX 143190907 143190951 -23459345 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1677 222 62 0 0 chrX 143191399 143191431 -23458865 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 1677 295 302 0 73 chrX 143191476 143191612 -23458684 + CR1_Mam LINE CR1 1698 1823 -381 2 1677 23 0 0 0 chrX 143191946 143191969 -23458327 + AT_rich Low_complexity Low_complexity 1 23 0 2 1677 23643 22 0 0 chrX 143192624 143195408 -23454888 + L1Md_T LINE L1 2803 5586 -297 2 1677 8976 6 0 0 chrX 143195408 143196404 -23453892 + L1Md_T LINE L1 5587 6582 0 2 1677 220 341 23 12 chrX 143196626 143196712 -23453584 - L2 LINE L2 -1014 2405 2319 2 1677 426 108 0 0 chrX 143196993 143197067 -23453229 + (TG)n Simple_repeat Simple_repeat 1 74 0 2 1677 399 351 101 86 chrX 143197079 143197347 -23452949 - B4 SINE B4 -11 281 10 2 1677 4223 72 4 4 chrX 143197702 143198304 -23451992 - L1_Mus1 LINE L1 0 6567 6012 2 1677 300 258 10 41 chrX 143198636 143198733 -23451563 + MTEb LTR MaLR 279 372 -7 2 1677 3649 167 77 4 chrX 143199555 143200242 -23450054 + RMER19A LTR ERVK 1 737 0 2 1677 369 0 0 0 chrX 143201269 143201310 -23448986 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1677 306 308 92 52 chrX 143201382 143201549 -23448747 - B4A SINE B4 -114 178 6 2 1677 357 24 0 0 chrX 143201630 143201672 -23448624 + (TTA)n Simple_repeat Simple_repeat 1 42 0 2 1677 2432 88 0 28 chrX 143201672 143202024 -23448272 - L1Md_F2 LINE L1 -22 6560 6219 2 1677 31 26 0 0 chrX 143202090 143202128 -23448168 + AT_rich Low_complexity Low_complexity 1 38 0 3 1677 1700 108 17 51 chrX 143202429 143202746 -23447550 + L1Md_F2 LINE L1 6294 6582 0 3 1677 252 323 29 57 chrX 143202748 143202853 -23447443 + PB1 SINE Alu 1 102 -25 3 1677 1100 279 51 11 chrX 143202858 143203210 -23447086 + Lx6 LINE L1 7069 7434 -26 3 1677 1764 238 31 4 chrX 143203639 143204028 -23446268 + MTD LTR MaLR 26 407 -12 3 1677 245 228 113 47 chrX 143204862 143204968 -23445328 - L1MC LINE L1 -472 5861 5749 3 1677 2521 171 113 0 chrX 143205075 143205402 -23444894 - RMER6A LTR ERVK -4 752 378 3 1677 360 0 0 0 chrX 143205402 143205442 -23444854 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 1677 2521 171 113 0 chrX 143205442 143205636 -23444660 - RMER6A LTR ERVK -379 377 173 3 1677 615 320 191 26 chrX 143205630 143205914 -23444382 - MTEa LTR MaLR -48 331 1 3 1677 262 193 18 0 chrX 143205961 143206018 -23444278 - L1M5 LINE L1 -570 5609 5552 3 1677 259 323 45 0 chrX 143206225 143206380 -23443916 + L1_Mur2 LINE L1 3450 3611 -2266 3 1677 356 304 42 13 chrX 143206410 143206888 -23443408 + L1M3 LINE L1 5008 5500 -944 3 1677 456 104 0 0 chrX 143207010 143207077 -23443219 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 1677 657 333 10 0 chrX 143207237 143207444 -23442852 + ID_B1 SINE B4 1 209 -15 3 1677 4913 68 3 2 chrX 143208310 143208944 -23441352 - L1_Mus1 LINE L1 -1 6566 5932 3 1677 273 237 24 95 chrX 143209231 143209315 -23440981 + MLT1A LTR MaLR 1 78 -296 3 1677 234 389 90 11 chrX 143209337 143209514 -23440782 + MLT1A LTR MaLR 170 360 -5 3 1677 3933 131 14 23 chrX 143209529 143210187 -23440109 - Lx2 LINE L1 -1 6996 6345 3 1677 679 250 71 10 chrX 143210611 143210809 -23439487 + B3 SINE B2 2 211 -5 3 1677 180 304 177 0 chrX 143210921 143211000 -23439296 + MIRm SINE MIR 48 140 -136 3 1677 974 339 31 14 chrX 143211310 143211663 -23438633 + MTD LTR MaLR 1 359 -60 3 1677 1565 143 49 4 chrX 143212728 143212995 -23437301 + Lx2B LINE L1 6353 6631 -369 3 1677 670 220 85 23 chrX 143212984 143213161 -23437135 + Lx9 LINE L1 7250 7437 -207 3 1677 3412 154 30 3 chrX 143213159 143213751 -23436545 + L1_Mur2 LINE L1 5256 5863 -14 3 1677 1788 80 4 15 chrX 143213755 143214020 -23436276 + L1_Mur1 LINE L1 4251 4512 -1374 3 1677 222 116 0 0 chrX 143214201 143214244 -23436052 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 3 1677 1796 82 4 0 chrX 143214912 143215181 -23435115 + L1_Mus1 LINE L1 6321 6567 0 3 1677 204 40 0 0 chrX 143215680 143215705 -23434591 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 1677 228 335 172 50 chrX 143216096 143216357 -23433939 + MER57C2 LTR ERV1 49 341 -93 3 1677 286 301 48 12 chrX 143216866 143216950 -23433346 + Cheshire DNA MER1_type 173 259 -2161 3 1677 3591 89 0 14 chrX 143217788 143218280 -23432016 - L1_Mus1 LINE L1 -138 6429 5945 3 1677 385 145 0 0 chrX 143219214 143219276 -23431020 - Lx9 LINE L1 -829 6815 6754 3 1677 607 198 75 19 chrX 143219294 143219454 -23430842 - L1_Rod LINE L1 -409 5438 5270 3 1677 577 327 77 27 chrX 143220823 143221084 -23429212 + B4A SINE B4 19 292 0 3 1677 230 279 40 5 chrX 143221226 143221322 -23428974 - MIR SINE MIR -166 102 2 3 1677 978 265 64 28 chrX 143221402 143221791 -23428505 + L1ME3A LINE L1 5521 5923 -250 3 1677 213 65 0 0 chrX 143223237 143223268 -23427028 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1677 2938 76 0 0 chrX 143223340 143223721 -23426575 + L1_Mus2 LINE L1 6171 6551 -15 3 1677 21 0 0 0 chrX 143225139 143225160 -23425136 + AT_rich Low_complexity Low_complexity 1 21 0 3 1677 509 379 55 33 chrX 143225249 143225615 -23424681 + L3 LINE CR1 2888 3261 -1228 3 1677 1550 188 82 20 chrX 143225714 143226018 -23424278 - Lx5 LINE L1 -1 7049 6727 3 1677 554 332 70 32 chrX 143227475 143227789 -23422507 + Lx8 LINE L1 6949 7274 -199 3 1677 615 324 34 19 chrX 143227944 143228152 -23422144 + MTE2b LTR MaLR 165 375 -4 3 1677 288 286 0 0 chrX 143228688 143228751 -23421545 + ID4_ SINE ID 2 64 -19 3 1677 359 296 23 69 chrX 143229524 143229698 -23420598 + MTE-int LTR MaLR 454 619 -961 3 1677 600 273 34 68 chrX 143229770 143230065 -23420231 + RLTR15 LTR ERVK 18 302 -57 3 1677 977 249 16 88 chrX 143230105 143230489 -23419807 - L1_Rod LINE L1 -675 5172 4817 3 1677 618 183 0 0 chrX 143230489 143230609 -23419687 + (TA)n Simple_repeat Simple_repeat 2 121 0 3 1677 543 246 111 6 chrX 143230612 143230784 -23419512 - L1_Rod LINE L1 -1037 4810 4621 3 1677 23 0 0 0 chrX 143231163 143231186 -23419110 + AT_rich Low_complexity Low_complexity 1 23 0 3 1677 378 0 0 0 chrX 143231700 143231742 -23418554 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 3 1677 24533 142 13 13 chrX 143232158 143234356 -23415940 - L1_Mus3 LINE L1 -2 6636 4475 3 1677 4049 48 0 0 chrX 143234356 143234854 -23415442 - L1Md_F2 LINE L1 0 6582 6085 3 1677 24533 164 19 18 chrX 143234854 143235328 -23414968 - L1_Mus3 LINE L1 -1409 4474 3983 3 1677 927 0 0 0 chrX 143235328 143235431 -23414865 + (TATATG)n Simple_repeat Simple_repeat 2 104 0 3 1677 24533 169 22 18 chrX 143235431 143238871 -23411425 - L1_Mus3 LINE L1 -1901 3982 505 3 1677 22 35 0 0 chrX 143239004 143239033 -23411263 + AT_rich Low_complexity Low_complexity 1 29 0 3 1677 230 301 94 25 chrX 143239044 143239279 -23411017 + L1MA9 LINE L1 5972 6222 -90 3 1677 5025 55 9 0 chrX 143240332 143240969 -23409327 - L1Md_F2 LINE L1 0 6582 5940 3 1677 268 269 0 0 chrX 143241054 143241121 -23409175 - ID4_ SINE ID -14 69 3 3 1677 6128 230 89 20 chrX 143241875 143244065 -23406231 - Lx7 LINE L1 -1347 6349 3989 3 1677 4791 161 24 4 chrX 143244065 143244869 -23405427 + Lx4A LINE L1 5757 6576 -482 3 1677 3145 136 140 30 chrX 143244869 143245469 -23404827 - RMER19A LTR ERVK -5 732 1 3 1677 2504 160 44 11 chrX 143245469 143245925 -23404371 + Lx4A LINE L1 6573 7043 -15 3 1677 248 179 11 56 chrX 143245930 143245977 -23404319 + A-rich Low_complexity Low_complexity 4 48 0 3 1677 1429 75 0 0 chrX 143245977 143246206 -23404090 + L1_Mus2 LINE L1 6379 6566 0 3 1677 3913 168 20 5 chrX 143246208 143246950 -23403346 - Lx7 LINE L1 -1876 4004 3252 3 1677 409 301 19 42 chrX 143246956 143247171 -23403125 - L1MD LINE L1 -705 5479 5270 3 1677 295 300 55 25 chrX 143247187 143247420 -23402876 - L1MD LINE L1 -1023 5123 4891 3 1677 241 402 107 15 chrX 143247520 143247717 -23402579 - MER77 LTR ERVL -91 516 302 3 1677 1775 212 109 70 chrX 143248120 143248633 -23401663 + MT2A LTR ERVL 1 533 0 3 1677 395 348 69 50 chrX 143249343 143249603 -23400693 - L1M5 LINE L1 -592 5648 5384 3 1677 23 97 0 0 chrX 143249823 143249895 -23400401 + AT_rich Low_complexity Low_complexity 1 72 0 3 1677 3513 173 35 55 chrX 143250003 143250418 -23399878 - RMER6D LTR ERVK 0 720 326 3 1677 3817 65 17 29 chrX 143250418 143250943 -23399353 - L1_Mus2 LINE L1 -1 6565 6047 3 1677 3513 173 35 55 chrX 143250943 143251259 -23399037 - RMER6D LTR ERVK -395 325 3 3 1677 201 175 0 0 chrX 143251555 143251595 -23398701 + (CATATA)n Simple_repeat Simple_repeat 5 44 0 3 1677 317 252 33 8 chrX 143251713 143251833 -23398463 + (TA)n Simple_repeat Simple_repeat 2 124 0 3 1677 485 238 93 6 chrX 143252131 143252292 -23398004 - MER53 DNA hAT 0 193 19 3 1677 249 40 59 20 chrX 143252525 143252576 -23397720 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 3 1677 2415 168 111 31 chrX 143252590 143253130 -23397166 - RMER4B LTR ERVK -1 584 2 3 1677 23 33 0 0 chrX 143253824 143253854 -23396442 + AT_rich Low_complexity Low_complexity 1 30 0 3 1677 571 215 6 6 chrX 143254014 143254192 -23396104 + (TG)n Simple_repeat Simple_repeat 2 179 0 3 1677 212 311 0 0 chrX 143254193 143254254 -23396042 + (TATG)n Simple_repeat Simple_repeat 2 62 0 3 1677 848 307 70 80 chrX 143254437 143254837 -23395459 - RLTR28B LTR ERVL -82 399 4 3 1677 254 330 11 0 chrX 143255474 143255565 -23394731 - RodERV21-int LTR ERV1 -446 4545 4454 3 1677 5441 68 19 15 chrX 143256599 143257333 -23392963 + L1_Mus1 LINE L1 5829 6565 -2 3 1677 368 134 0 47 chrX 143257338 143257424 -23392872 - RCHARR1 DNA MER1_type -121 853 772 3 1677 350 341 48 21 chrX 143257725 143257911 -23392385 - B3A SINE B2 -7 191 1 3 1677 712 341 14 11 chrX 143258766 143259042 -23391254 + RMER15 LTR ERVL 299 575 0 3 1677 326 23 23 0 chrX 143259537 143259580 -23390716 + (TA)n Simple_repeat Simple_repeat 1 44 0 3 1677 725 282 85 44 chrX 143260096 143260586 -23389710 + L1M2 LINE L1 4648 5127 -753 3 1677 434 328 77 43 chrX 143260617 143260824 -23389472 + MTEa LTR MaLR 157 370 -9 3 1677 266 345 41 49 chrX 143261169 143261291 -23389005 - RSINE1 SINE B4 -19 146 26 3 1678 243 295 35 0 chrX 143261805 143261887 -23388409 - MLT1H2 LTR MaLR -5 574 425 3 1678 3567 17 0 0 chrX 143262095 143262503 -23387793 + L1Md_A LINE L1 6175 6582 0 3 1678 2982 155 32 15 chrX 143262782 143263320 -23386976 + Lx LINE L1 6108 6654 0 3 1678 451 365 20 0 chrX 143263495 143263643 -23386653 - MER58B DNA MER1_type -9 332 182 3 1678 270 355 100 0 chrX 143264085 143264305 -23385991 + MER102a DNA MER1_type 30 271 -59 3 1678 4846 16 0 0 chrX 143264472 143265029 -23385267 + L1Md_T LINE L1 5030 5586 -297 3 1678 8974 5 0 0 chrX 143265029 143266025 -23384271 + L1Md_T LINE L1 5587 6582 0 3 1678 249 322 16 50 chrX 143266692 143266813 -23383483 - MIRb SINE MIR -36 232 116 3 1678 408 162 62 0 chrX 143266934 143267014 -23383282 + RMER1C Other Other 1139 1223 -119 3 1678 1371 246 98 39 chrX 143267660 143268049 -23382247 - MTD LTR MaLR -5 414 3 3 1678 300 245 20 20 chrX 143268055 143268178 -23382118 - Lx9 LINE L1 -3 7641 7518 3 1678 351 0 0 0 chrX 143268178 143268217 -23382079 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1678 731 216 19 0 chrX 143268217 143268379 -23381917 - Lx9 LINE L1 -165 7479 7315 3 1678 264 200 0 110 chrX 143268815 143268888 -23381408 + MTEb LTR MaLR 4 68 -311 3 1678 216 0 0 0 chrX 143269048 143269072 -23381224 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1678 232 267 10 22 chrX 143269249 143269348 -23380948 - Lx6 LINE L1 -43 7417 7341 3 1678 353 280 39 20 chrX 143269813 143269915 -23380381 + B3A SINE B2 4 107 -91 4 1678 432 180 0 22 chrX 143269949 143270040 -23380256 + URR1B DNA MER1_type 65 153 -72 4 1678 1832 153 12 12 chrX 143270143 143270481 -23379815 + L1_Mus3 LINE L1 4961 5298 -585 4 1678 3683 105 12 102 chrX 143270485 143271162 -23379134 + L1VL1 LINE L1 220 835 -5587 4 1678 2500 97 0 17 chrX 143271162 143271517 -23378779 + L1_Mus1 LINE L1 6217 6565 -2 4 1678 3113 99 136 0 chrX 143271523 143272301 -23377995 + L1_Mus3 LINE L1 5289 6207 -431 4 1678 2780 59 3 0 chrX 143272474 143272829 -23377467 + L1_Mus3 LINE L1 6216 6571 -11 4 1678 213 159 0 0 chrX 143273108 143273152 -23377144 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1678 1151 120 11 0 chrX 143273564 143273739 -23376557 - L1_Mus2 LINE L1 -1 6565 6389 4 1678 450 0 0 0 chrX 143274078 143274128 -23376168 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1678 258 264 0 0 chrX 143274691 143274763 -23375533 - L1MA5 LINE L1 0 6300 6229 4 1678 341 226 82 68 chrX 143274873 143275096 -23375200 - Lx6 LINE L1 -47 7413 7193 4 1678 412 280 143 14 chrX 143275108 143275325 -23374971 - L1MA4 LINE L1 -360 5940 5696 4 1678 2741 221 79 18 chrX 143275534 143275661 -23374635 - RMER1B Other Other -10 1056 935 4 1678 4409 74 26 12 chrX 143275661 143276266 -23374030 + L1Md_F2 LINE L1 5969 6582 0 4 1678 2741 221 79 18 chrX 143276266 143276796 -23373500 - RMER1B Other Other -132 934 359 4 1678 23 0 0 0 chrX 143276907 143276930 -23373366 + AT_rich Low_complexity Low_complexity 1 23 0 4 1678 523 287 0 23 chrX 143276971 143277103 -23373193 - RSINE1 SINE B4 -25 140 12 4 1678 182 37 0 36 chrX 143277230 143277258 -23373038 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 1678 225 253 11 33 chrX 143277698 143277788 -23372508 + L1M3 LINE L1 3685 3772 -2368 4 1678 23 0 0 0 chrX 143277942 143277965 -23372331 + AT_rich Low_complexity Low_complexity 1 23 0 4 1678 5390 109 4 8 chrX 143278574 143279379 -23370917 - L1_Mus4 LINE L1 0 6636 5835 4 1678 21 0 0 0 chrX 143279567 143279588 -23370708 + AT_rich Low_complexity Low_complexity 1 21 0 4 1678 28973 88 17 50 chrX 143279887 143283658 -23366638 + L1Md_T LINE L1 630 4415 -1468 4 1678 1578 16 5 0 chrX 143283658 143283850 -23366446 + MTA_Mm LTR MaLR 1 193 -203 4 1678 28973 88 17 50 chrX 143283850 143285015 -23365281 + L1Md_T LINE L1 4416 5586 -297 4 1678 8355 36 0 0 chrX 143285015 143286011 -23364285 + L1Md_T LINE L1 5587 6582 0 4 1678 1752 42 5 0 chrX 143286011 143286228 -23364068 + MTA_Mm LTR MaLR 179 396 0 4 1678 8289 87 20 0 chrX 143286228 143287391 -23362905 + L1Md_F2 LINE L1 4401 5586 -297 4 1678 7649 64 8 2 chrX 143287392 143288378 -23361918 + L1Md_F2 LINE L1 5588 6579 -3 4 1678 323 128 24 82 chrX 143288620 143288705 -23361591 + Lx2 LINE L1 6916 6995 -2 4 1678 1088 128 0 6 chrX 143288718 143288898 -23361398 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 4 1678 28 71 0 0 chrX 143289258 143289314 -23360982 + AT_rich Low_complexity Low_complexity 1 56 0 4 1678 1274 150 59 0 chrX 143290260 143290480 -23359816 - L1_Mur2 LINE L1 -615 5262 5030 4 1678 3297 116 88 10 chrX 143290445 143291134 -23359162 + L1_Mus2 LINE L1 5689 6530 -52 4 1678 31 68 0 0 chrX 143291456 143291515 -23358781 + AT_rich Low_complexity Low_complexity 1 59 0 4 1678 5573 240 70 31 chrX 143292094 143293577 -23356719 - Lx7 LINE L1 -33 7663 6123 4 1678 419 357 38 38 chrX 143293626 143293835 -23356461 + MTE-int LTR MaLR 206 415 -1165 4 1678 2997 30 16 0 chrX 143293835 143294199 -23356097 - L1Md_F2 LINE L1 0 6582 6213 4 1678 419 357 38 38 chrX 143294199 143294225 -23356071 + MTE-int LTR MaLR 416 441 -1139 4 1678 448 364 82 26 chrX 143294504 143294772 -23355524 - B4A SINE B4 -8 284 2 4 1678 1129 294 117 19 chrX 143294798 143295598 -23354698 - L1M2 LINE L1 -856 5287 4407 4 1678 22 35 0 0 chrX 143295888 143295917 -23354379 + AT_rich Low_complexity Low_complexity 1 29 0 4 1678 24 32 0 0 chrX 143296497 143296528 -23353768 + AT_rich Low_complexity Low_complexity 1 31 0 4 1678 1989 189 144 7 chrX 143296674 143297110 -23353186 - RMER19A LTR ERVK -241 496 1 4 1678 330 301 1 0 chrX 143297115 143297223 -23353073 - Lx7 LINE L1 -1065 6631 6512 4 1678 470 236 62 57 chrX 143297263 143297474 -23352822 + L1MA9 LINE L1 6101 6312 0 4 1678 3870 166 61 41 chrX 143297563 143297987 -23352309 + RMER17A2 LTR ERVK 1 412 -494 4 1678 423 0 0 0 chrX 143297987 143298034 -23352262 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 1678 423 0 0 0 chrX 143298034 143298080 -23352216 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1678 3870 166 61 41 chrX 143298080 143298537 -23351759 + RMER17A2 LTR ERVK 413 900 -6 4 1678 353 323 31 19 chrX 143298743 143298885 -23351411 - PB1D9 SINE Alu -3 144 8 4 1678 484 289 80 22 chrX 143299248 143299613 -23350683 + L1M2 LINE L1 2854 3239 -2904 4 1678 355 308 197 3 chrX 143300231 143300536 -23349760 + L1MB7 LINE L1 5717 6080 -104 4 1678 354 23 0 0 chrX 143300737 143300780 -23349516 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1678 606 212 0 126 chrX 143300806 143300973 -23349323 - B1_Mur3 SINE Alu -1 148 3 4 1678 378 0 0 0 chrX 143301179 143301221 -23349075 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 1678 875 265 123 34 chrX 143301533 143301940 -23348356 + L1MD1 LINE L1 5608 6050 -192 4 1678 257 308 41 8 chrX 143301953 143302074 -23348222 + L1MD1 LINE L1 6103 6227 -15 4 1678 276 261 94 117 chrX 143302295 143302359 -23347937 + B2_Mm2 SINE B2 1 69 -147 4 1678 269 111 0 0 chrX 143302359 143302395 -23347901 - U2 snRNA snRNA -152 36 1 4 1678 276 261 94 117 chrX 143302395 143302501 -23347795 + B2_Mm2 SINE B2 70 186 -30 4 1678 392 283 100 24 chrX 143302568 143302778 -23347518 + L1MB8 LINE L1 5948 6173 -5 4 1678 740 60 0 0 chrX 143302826 143302926 -23347370 - L1_Mus2 LINE L1 -4 6562 6463 4 1678 235 317 23 62 chrX 143302966 143303094 -23347202 + ID4 SINE ID 3 125 -27 4 1678 387 0 0 0 chrX 143303848 143303891 -23346405 + (TC)n Simple_repeat Simple_repeat 2 44 0 4 1678 1006 79 50 0 chrX 143303912 143304052 -23346244 - B1_Mus2 SINE Alu 0 147 1 4 1678 263 267 0 70 chrX 143304074 143304212 -23346084 - Lx6 LINE L1 -27 7433 7316 4 1678 3004 132 11 8 chrX 143304835 143305309 -23344987 + Lx2A LINE L1 6493 6967 -41 4 1678 442 103 0 0 chrX 143305310 143305378 -23344918 + Lx2A1 LINE L1 6924 6991 -17 4 1678 351 0 0 0 chrX 143305378 143305417 -23344879 + (TAA)n Simple_repeat Simple_repeat 2 40 0 4 1678 1023 53 0 8 chrX 143305472 143305605 -23344691 - B1_Mus2 SINE Alu 0 147 16 4 1678 333 0 0 0 chrX 143305638 143305675 -23344621 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 1678 24 0 0 0 chrX 143305783 143305807 -23344489 + AT_rich Low_complexity Low_complexity 1 24 0 4 1678 360 274 134 20 chrX 143307053 143307202 -23343094 + B2_Mm2 SINE B2 1 166 -29 4 1678 351 0 0 0 chrX 143307238 143307277 -23343019 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1678 484 365 157 0 chrX 143308980 143309254 -23341042 + MLT1F2 LTR MaLR 244 560 0 4 1678 279 0 0 0 chrX 143309515 143309546 -23340750 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1678 819 70 0 0 chrX 143309568 143309683 -23340613 + (TG)n Simple_repeat Simple_repeat 2 116 0 4 1678 1172 252 48 45 chrX 143309856 143310209 -23340087 + Lx6 LINE L1 7107 7460 0 4 1678 489 171 106 97 chrX 143310240 143310467 -23339829 - Lx9 LINE L1 0 7644 7416 4 1678 409 307 62 28 chrX 143310484 143310628 -23339668 - RSINE1 SINE B4 -12 153 5 4 1678 507 60 0 0 chrX 143310630 143310697 -23339599 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 1678 1120 130 32 0 chrX 143310783 143310968 -23339328 + Lx LINE L1 6461 6651 -3 4 1678 291 291 58 11 chrX 143311833 143311920 -23338376 - ID_B1 SINE B4 0 224 134 4 1678 420 298 109 24 chrX 143311962 143312127 -23338169 - B3A SINE B2 -16 182 4 4 1678 33268 80 7 5 chrX 143312518 143317105 -23333191 - L1Md_F2 LINE L1 -12 6570 1971 4 1678 193 29 29 29 chrX 143317105 143317140 -23333156 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1678 33268 108 38 6 chrX 143317140 143318694 -23331602 - L1Md_F2 LINE L1 -3913 1970 365 4 1678 2777 65 8 10 chrX 143319006 143319392 -23330904 - L1Md_F2 LINE L1 -11 6571 6187 4 1678 271 288 62 0 chrX 143319896 143319976 -23330320 + BC1_Mm scRNA scRNA 12 96 -56 4 1678 259 248 259 15 chrX 143320191 143320396 -23329900 + L1MA8 LINE L1 6031 6285 -6 4 1678 369 332 49 80 chrX 143320421 143320709 -23329587 + L1MDa LINE L1 1832 2110 -4523 4 1678 370 277 117 31 chrX 143320806 143321161 -23329135 + L1MDa LINE L1 2309 2683 -3854 4 1678 512 244 169 16 chrX 143321183 143321366 -23328930 + B3 SINE B2 1 211 -5 4 1678 284 358 67 56 chrX 143321910 143322179 -23328117 + L1M4b LINE L1 524 795 -6539 4 1678 670 216 0 8 chrX 143322240 143322366 -23327930 - B1_Mur3 SINE Alu -20 129 5 4 1678 2594 46 65 0 chrX 143322676 143323001 -23327295 - ORR1A1 LTR MaLR 0 346 1 4 1678 519 308 45 40 chrX 143323002 143323178 -23327118 + B3 SINE B2 36 212 -4 4 1678 327 289 111 60 chrX 143323184 143323383 -23326913 + L1M4b LINE L1 1391 1599 -5735 4 1678 866 303 67 0 chrX 143323472 143323739 -23326557 + Lx8 LINE L1 6311 6595 -878 4 1678 348 254 53 122 chrX 143323779 143323967 -23326329 + L1M2 LINE L1 5551 5725 -464 4 1678 421 283 27 27 chrX 143323967 143324116 -23326180 + B1F1 SINE Alu 1 149 0 4 1678 216 0 0 0 chrX 143324122 143324146 -23326150 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1678 253 47 0 44 chrX 143324150 143324195 -23326101 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1678 4646 149 7 74 chrX 143325568 143326464 -23323832 + Lx LINE L1 5817 6652 -2 4 1678 26 0 0 0 chrX 143326920 143326946 -23323350 + AT_rich Low_complexity Low_complexity 1 26 0 4 1678 587 312 49 22 chrX 143327375 143327601 -23322695 - B4 SINE B4 -60 232 1 4 1678 226 185 45 15 chrX 143328270 143328336 -23321960 + (TA)n Simple_repeat Simple_repeat 1 68 0 4 1678 27 29 0 0 chrX 143328460 143328494 -23321802 + AT_rich Low_complexity Low_complexity 1 34 0 4 1678 231 278 37 0 chrX 143328635 143328689 -23321607 - tRNA-Ala-GCY_ tRNA tRNA -11 64 9 4 1678 230 349 30 0 chrX 143328689 143328701 -23321595 - ID2 SINE ID -13 70 3 4 1678 385 301 74 21 chrX 143329028 143329099 -23321197 + MER3 DNA MER1_type 10 83 -126 4 1678 3729 53 6 13 chrX 143329099 143329577 -23320719 + MT2C_Mm LTR ERVL 1 475 0 5 1678 385 301 74 21 chrX 143329577 143329695 -23320601 + MER3 DNA MER1_type 84 208 -1 4 1678 9333 24 0 0 chrX 143329908 143330994 -23319302 + L1Md_T LINE L1 4502 5587 -296 5 1678 8335 35 1 0 chrX 143330995 143331988 -23318308 + L1Md_T LINE L1 5589 6582 0 5 1678 314 297 113 33 chrX 143333088 143333238 -23317058 - MIRc SINE MIR -17 251 90 5 1678 994 253 123 24 chrX 143333455 143333787 -23316509 - MTE2b LTR MaLR -7 372 8 5 1678 6754 51 8 36 chrX 143333980 143335029 -23315267 + L1Md_T LINE L1 418 1432 -4451 5 1678 27462 26 0 1 chrX 143335029 143338289 -23312007 + L1Md_T LINE L1 2330 5587 -296 5 1678 8335 35 1 0 chrX 143338290 143339283 -23311013 + L1Md_T LINE L1 5589 6582 0 5 1678 314 297 113 33 chrX 143340383 143340533 -23309763 - MIRc SINE MIR -17 251 90 5 1678 994 253 123 24 chrX 143340750 143341082 -23309214 - MTE2b LTR MaLR -7 372 8 5 1678 6748 52 8 36 chrX 143341275 143342324 -23307972 + L1Md_T LINE L1 418 1432 -4451 5 1678 27360 27 0 1 chrX 143342324 143345583 -23304713 + L1Md_T LINE L1 2330 5586 -297 5 1678 8406 33 1 0 chrX 143345583 143346578 -23303718 + L1Md_T LINE L1 5587 6582 0 5 1678 30 0 0 0 chrX 143347194 143347224 -23303072 + AT_rich Low_complexity Low_complexity 1 30 0 5 1678 429 110 0 0 chrX 143347379 143347452 -23302844 + (TC)n Simple_repeat Simple_repeat 1 73 0 5 1678 217 272 30 54 chrX 143347706 143347815 -23302481 - MIRb SINE MIR -28 234 124 5 1678 221 185 19 0 chrX 143348468 143348522 -23301774 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1678 275 270 0 0 chrX 143348523 143348597 -23301699 + L1M4c LINE L1 98 171 -7163 5 1678 213 132 0 0 chrX 143348629 143348667 -23301629 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1678 400 242 108 43 chrX 143348676 143348862 -23301434 + CYRA11_Mm Unknown Y-chromosome 187 384 -233 5 1678 835 158 164 0 chrX 143348698 143348863 -23301433 - URR1A DNA MER1_type -33 193 2 5 1678 267 277 12 0 chrX 143348874 143348957 -23301339 + L1M4c LINE L1 113 196 -7138 5 1678 310 342 89 21 chrX 143349531 143349812 -23300484 + L1M4c LINE L1 987 1286 -6048 5 1678 353 322 174 69 chrX 143349975 143350092 -23300204 + L1M4c LINE L1 1910 2030 -5304 5 1678 452 335 33 9 chrX 143350092 143350303 -23299993 + B3 SINE B2 1 216 0 5 1678 428 322 174 69 chrX 143350303 143350690 -23299606 + L1M4c LINE L1 2029 2462 -4872 5 1678 1414 205 40 51 chrX 143350690 143351065 -23299231 + ORR1D1 LTR MaLR 4 374 0 5 1678 353 322 174 69 chrX 143351065 143351112 -23299184 + L1M4c LINE L1 2463 2519 -4815 5 1678 307 265 155 18 chrX 143351376 143351626 -23298670 + L1M4c LINE L1 2993 3280 -4054 5 1678 950 155 60 6 chrX 143351626 143351808 -23298488 + B2_Mm2 SINE B2 1 192 -3 5 1678 307 265 155 18 chrX 143351808 143351841 -23298455 + L1M4c LINE L1 3281 3315 -4019 5 1678 442 174 88 35 chrX 143351847 143351960 -23298336 + RLTR47_MM LTR ERV1 328 446 -86 5 1678 641 24 24 0 chrX 143351960 143352042 -23298254 + (GAAA)n Simple_repeat Simple_repeat 1 84 0 5 1678 1204 218 129 32 chrX 143352172 143352513 -23297783 + ORR1D1 LTR MaLR 1 374 0 5 1678 395 340 98 11 chrX 143352532 143352817 -23297479 + L1M4c LINE L1 3278 3587 -3419 5 1678 267 262 0 90 chrX 143353011 143353200 -23297096 + A-rich Low_complexity Low_complexity 5 176 0 5 1678 13873 96 10 1 chrX 143353253 143355129 -23295167 + MERVL-int LTR ERVL 3465 5356 -129 5 1678 330 162 11 81 chrX 143355233 143355320 -23294976 + ORR1A3-int LTR MaLR 560 640 -1323 5 1678 285 27 0 0 chrX 143355320 143355357 -23294939 + MERVL-int LTR ERVL 5448 5484 -1 5 1678 2684 137 36 38 chrX 143355358 143355828 -23294468 + MT2C_Mm LTR ERVL 1 469 -6 5 1678 539 256 88 24 chrX 143356135 143356463 -23293833 + L1M4c LINE L1 3987 4335 -2671 5 1678 579 256 12 75 chrX 143356701 143356874 -23293422 + RSINE1 SINE B4 4 165 0 5 1678 201 94 0 0 chrX 143356882 143356914 -23293382 + (CATA)n Simple_repeat Simple_repeat 1 32 0 5 1678 449 287 118 86 chrX 143357112 143357485 -23292811 + L1M4c LINE L1 4851 5235 -1771 5 1678 254 326 12 0 chrX 143357489 143357575 -23292721 - Lx9 LINE L1 -761 6883 6797 5 1678 953 274 97 23 chrX 143357570 143358086 -23292210 + Lx9 LINE L1 7091 7644 0 5 1678 23 33 0 0 chrX 143358177 143358207 -23292089 + AT_rich Low_complexity Low_complexity 1 30 0 5 1678 468 93 0 0 chrX 143359164 143359239 -23291057 + (TC)n Simple_repeat Simple_repeat 2 76 0 5 1678 360 0 0 0 chrX 143359238 143359278 -23291018 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1678 1143 66 0 0 chrX 143359278 143359444 -23290852 + (TC)n Simple_repeat Simple_repeat 1 166 0 5 1678 375 312 20 7 chrX 143359724 143359818 -23290478 - PB1D10 SINE Alu -26 101 1 5 1678 635 212 207 0 chrX 143360025 143360204 -23290092 - B3 SINE B2 0 216 1 5 1678 381 93 0 0 chrX 143360475 143360529 -23289767 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 1678 496 286 255 32 chrX 143360723 143361005 -23289291 - Lx8 LINE L1 -20 7453 7109 5 1678 402 94 0 0 chrX 143361212 143361276 -23289020 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 1678 306 195 35 47 chrX 143361661 143361747 -23288549 - L1MC4a LINE L1 -1190 6692 6608 5 1678 5000 118 49 18 chrX 143361747 143362529 -23287767 - Lx LINE L1 -14 6640 5835 5 1678 271 369 53 39 chrX 143363197 143363403 -23286893 - ERVL-E-int LTR ERVL -1878 3789 3581 5 1678 804 258 165 30 chrX 143363607 143363935 -23286361 - ORR1D1 LTR MaLR -2 372 1 5 1678 1193 48 0 0 chrX 143364035 143364182 -23286114 - B1_Mus1 SINE Alu 0 148 2 5 1678 468 51 0 0 chrX 143365225 143365284 -23285012 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1678 243 0 0 0 chrX 143365284 143365311 -23284985 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 1678 541 335 114 44 chrX 143365984 143366256 -23284040 - B4A SINE B4 -1 291 1 5 1678 900 165 16 38 chrX 143366935 143367118 -23283178 + Lx4B LINE L1 6880 7058 0 5 1678 3016 42 5 0 chrX 143367267 143367646 -23282650 - L1_Mm LINE L1 -515 5368 4988 5 1678 3390 25 5 0 chrX 143367646 143368046 -23282250 + L1Md_F3 LINE L1 6182 6583 -1 5 1678 412 303 66 36 chrX 143370387 143370524 -23279772 + RSINE1 SINE B4 15 155 -10 5 1678 258 143 0 0 chrX 143370539 143370588 -23279708 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1678 288 119 0 0 chrX 143371908 143371950 -23278346 - L1_Mur2 LINE L1 -1431 4446 4405 5 1678 5140 137 27 22 chrX 143371950 143372830 -23277466 + Lx2 LINE L1 6113 6997 0 5 1678 481 271 330 43 chrX 143372837 143373259 -23277037 + L1M4c LINE L1 1 542 -5842 5 1678 440 294 131 5 chrX 143373290 143373488 -23276808 + L1M4c LINE L1 601 823 -5561 5 1678 624 294 109 26 chrX 143373488 143373678 -23276618 - MTD LTR MaLR -163 216 42 5 1678 695 285 57 103 chrX 143373713 143373975 -23276321 - MT2A LTR ERVL -283 250 1 5 1678 758 273 147 10 chrX 143374082 143374592 -23275704 + L1M4c LINE L1 1761 2340 -4044 5 1678 472 321 29 0 chrX 143374754 143374891 -23275405 - ID_B1 SINE B4 -3 221 81 5 1678 1234 197 101 58 chrX 143374943 143375314 -23274982 + MT2B LTR ERVL 1 559 -42 5 1678 495 0 0 0 chrX 143375314 143375369 -23274927 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1678 1234 190 89 65 chrX 143375369 143375410 -23274886 + MT2B LTR ERVL 560 600 -1 5 1678 391 281 14 69 chrX 143375534 143375551 -23274745 + ID_B1 SINE B4 86 177 -47 5 1678 404 282 25 41 chrX 143375551 143375673 -23274623 + B1F SINE Alu 22 141 -8 5 1678 3056 79 2 2 chrX 143375699 143376107 -23274189 + L1_Mus2 LINE L1 6159 6566 0 5 1678 432 0 0 0 chrX 143376193 143376241 -23274055 + (TAAAA)n Simple_repeat Simple_repeat 2 49 0 5 1678 26 0 0 0 chrX 143376272 143376298 -23273998 + AT_rich Low_complexity Low_complexity 1 26 0 5 1678 5628 147 69 4 chrX 143376465 143377556 -23272740 - Lx5 LINE L1 -1119 5931 4779 5 1678 234 0 0 0 chrX 143377623 143377649 -23272647 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 1678 22 0 0 0 chrX 143377844 143377866 -23272430 + AT_rich Low_complexity Low_complexity 1 22 0 5 1678 186 288 69 81 chrX 143378426 143378513 -23271783 - L3b LINE CR1 -212 270 185 5 1678 284 175 16 0 chrX 143379816 143379879 -23270417 + (TTA)n Simple_repeat Simple_repeat 2 65 0 5 1678 587 290 14 0 chrX 143379899 143380044 -23270252 + RSINE1 SINE B4 2 148 -17 5 1678 28 0 0 0 chrX 143380056 143380084 -23270212 + AT_rich Low_complexity Low_complexity 1 28 0 5 1678 234 289 82 34 chrX 143380413 143380560 -23269736 + L1M3 LINE L1 3914 4067 -2073 5 1678 481 291 53 14 chrX 143380575 143380784 -23269512 - L1M2 LINE L1 -1214 4929 4713 5 1678 23 0 0 0 chrX 143384959 143384982 -23265314 + AT_rich Low_complexity Low_complexity 1 23 0 5 1678 765 87 0 0 chrX 143385702 143385806 -23264490 + B1_Mus1 SINE Alu 39 142 -6 5 1678 805 175 6 6 chrX 143385811 143385978 -23264318 + GA-rich Low_complexity Low_complexity 2 168 0 5 1678 208 133 0 0 chrX 143385978 143386008 -23264288 + (GAAAA)n Simple_repeat Simple_repeat 5 34 0 5 1678 2917 175 13 54 chrX 143386098 143386708 -23263588 + RMER4B LTR ERVK 1 585 0 5 1678 558 0 0 0 chrX 143386897 143386959 -23263337 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 1678 343 290 43 55 chrX 143386965 143387129 -23263167 + L1M5 LINE L1 5271 5432 -808 5 1678 360 0 0 0 chrX 143387318 143387358 -23262938 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1678 495 0 0 0 chrX 143387358 143387412 -23262884 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1678 650 269 154 0 chrX 143387418 143387775 -23262521 + L1MA5 LINE L1 5478 5889 -411 5 1678 280 64 43 0 chrX 143387799 143387846 -23262450 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 5 1678 219 258 15 15 chrX 143387966 143388033 -23262263 + GA-rich Low_complexity Low_complexity 1 67 0 5 1678 1978 79 14 4 chrX 143388597 143388876 -23261420 - L1_Mus2 LINE L1 0 6566 6285 5 1678 598 322 63 19 chrX 143389902 143390171 -23260125 - B4A SINE B4 -11 281 1 5 1678 1118 209 38 0 chrX 143390603 143390814 -23259482 - URR1B DNA MER1_type -6 219 1 5 1678 26 50 0 0 chrX 143390874 143390914 -23259382 + AT_rich Low_complexity Low_complexity 1 40 0 5 1678 616 212 96 40 chrX 143390982 143391159 -23259137 + B2_Mm2 SINE B2 1 187 -8 5 1678 218 192 19 0 chrX 143392418 143392470 -23257826 + GA-rich Low_complexity Low_complexity 3 55 0 5 1679 381 43 0 0 chrX 143393016 143393063 -23257233 + (TAAAA)n Simple_repeat Simple_repeat 1 47 0 5 1679 225 94 0 0 chrX 143393602 143393634 -23256662 + (T)n Simple_repeat Simple_repeat 1 32 0 5 1679 369 0 0 0 chrX 143393651 143393692 -23256604 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1679 656 98 0 10 chrX 143395826 143395929 -23254367 + (CA)n Simple_repeat Simple_repeat 2 103 0 5 1679 295 189 0 26 chrX 143396634 143396748 -23253548 + (TCTG)n Simple_repeat Simple_repeat 2 112 0 5 1679 223 171 0 24 chrX 143397955 143397997 -23252299 + G-rich Low_complexity Low_complexity 4 44 0 5 1679 227 191 16 0 chrX 143399064 143399127 -23251169 + (TA)n Simple_repeat Simple_repeat 1 64 0 5 1679 909 90 17 36 chrX 143399273 143399688 -23250608 + (CA)n Simple_repeat Simple_repeat 1 406 0 5 1679 180 306 22 56 chrX 143400237 143400327 -23249969 - MIRc SINE MIR -38 230 144 5 1679 316 246 0 0 chrX 143400473 143400530 -23249766 + ID4 SINE ID 25 81 -2 6 1679 305 287 60 17 chrX 143402788 143402905 -23247391 - MIR SINE MIR -50 212 91 6 1679 2057 57 0 4 chrX 143403817 143404080 -23246216 + L1Md_F3 LINE L1 6309 6570 -14 6 1679 909 42 0 0 chrX 143404226 143404344 -23245952 + (TG)n Simple_repeat Simple_repeat 2 119 0 6 1679 21 0 0 0 chrX 143404406 143404427 -23245869 + AT_rich Low_complexity Low_complexity 1 21 0 6 1679 27 0 0 0 chrX 143404847 143404874 -23245422 + AT_rich Low_complexity Low_complexity 1 27 0 6 1679 278 236 0 65 chrX 143406365 143406442 -23243854 + BC1_Mm scRNA scRNA 15 86 -66 6 1679 511 304 36 0 chrX 143406968 143407106 -23243190 + ID_B1 SINE B4 68 210 -14 6 1679 372 22 0 0 chrX 143407109 143407154 -23243142 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1679 27 29 0 0 chrX 143407459 143407493 -23242803 + AT_rich Low_complexity Low_complexity 1 34 0 6 1679 201 121 0 0 chrX 143407502 143407535 -23242761 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1679 465 90 0 0 chrX 143408227 143408294 -23242002 + (TG)n Simple_repeat Simple_repeat 1 67 0 6 1679 294 143 0 0 chrX 143408294 143408357 -23241939 + (GA)n Simple_repeat Simple_repeat 2 64 0 6 1679 275 328 49 32 chrX 143410964 143411087 -23239209 - RSINE1 SINE B4 -40 125 1 6 1679 192 0 75 50 chrX 143412726 143412766 -23237530 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 6 1679 440 300 56 21 chrX 143412816 143413005 -23237291 + RSINE1 SINE B4 14 165 0 6 1679 248 172 17 0 chrX 143413020 143413078 -23237218 + (ATG)n Simple_repeat Simple_repeat 3 61 0 6 1679 310 256 118 35 chrX 143414225 143414310 -23235986 + B1F SINE Alu 1 92 -57 6 1679 21 36 0 0 chrX 143415125 143415153 -23235143 + AT_rich Low_complexity Low_complexity 1 28 0 6 1679 23 0 0 0 chrX 143416417 143416440 -23233856 + AT_rich Low_complexity Low_complexity 1 23 0 6 1679 247 284 24 12 chrX 143416593 143416675 -23233621 + ID4_ SINE ID 1 83 0 6 1679 23 0 0 0 chrX 143416675 143416698 -23233598 + AT_rich Low_complexity Low_complexity 1 23 0 6 1679 760 221 0 0 chrX 143416814 143416954 -23233342 + B1_Mus1 SINE Alu 4 143 -5 6 1679 366 107 0 0 chrX 143416958 143417014 -23233282 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 1679 1304 67 0 11 chrX 143417014 143417195 -23233101 + (GGAGA)n Simple_repeat Simple_repeat 2 180 0 6 1679 22 35 0 0 chrX 143417371 143417400 -23232896 + AT_rich Low_complexity Low_complexity 1 29 0 6 1679 1555 26 0 45 chrX 143418410 143418609 -23231687 - B2_Mm1a SINE B2 -3 190 1 6 1679 21 71 0 0 chrX 143418759 143418801 -23231495 + AT_rich Low_complexity Low_complexity 1 42 0 6 1679 210 71 0 0 chrX 143418889 143418917 -23231379 + (CATATA)n Simple_repeat Simple_repeat 3 30 0 6 1679 29 84 0 0 chrX 143419287 143419358 -23230938 + AT_rich Low_complexity Low_complexity 1 71 0 6 1679 186 43 0 0 chrX 143419384 143419407 -23230889 + (TA)n Simple_repeat Simple_repeat 1 23 0 6 1679 23 0 0 0 chrX 143419808 143419831 -23230465 + AT_rich Low_complexity Low_complexity 1 23 0 6 1679 25 0 0 0 chrX 143420127 143420152 -23230144 + AT_rich Low_complexity Low_complexity 1 25 0 6 1679 318 343 78 14 chrX 143420693 143420912 -23229384 - MER58B DNA MER1_type -53 288 56 6 1679 1095 288 103 29 chrX 143421714 143422168 -23228128 - RMER5 LTR ERV1 -1 533 46 6 1679 264 283 33 74 chrX 143422705 143422827 -23227469 - PB1D10 SINE Alu 0 117 1 6 1679 33 0 0 0 chrX 143423832 143423865 -23226431 + AT_rich Low_complexity Low_complexity 1 33 0 6 1679 1058 127 66 0 chrX 143424460 143424641 -23225655 + B2_Mm2 SINE B2 1 193 -2 6 1679 680 262 23 123 chrX 143424666 143425144 -23225152 - Lx9 LINE L1 -15 7629 7200 6 1679 289 288 0 0 chrX 143425814 143425880 -23224416 - ID4_ SINE ID -14 69 4 6 1679 1829 43 0 29 chrX 143426777 143427017 -23223279 + L1Md_F2 LINE L1 6350 6582 0 6 1679 414 262 118 5 chrX 143427254 143427367 -23222929 - PB1D9 SINE Alu -22 128 8 6 1679 374 347 14 0 chrX 143427652 143427799 -23222497 + L1M5 LINE L1 5463 5611 -629 6 1679 230 307 39 10 chrX 143427811 143427913 -23222383 + L1ME5 LINE L1 6073 6177 -17 6 1679 403 277 203 7 chrX 143428426 143428564 -23221732 + B3A SINE B2 1 165 -33 6 1679 305 343 78 39 chrX 143428575 143428781 -23221515 - MIRb SINE MIR -36 232 19 6 1679 30 27 0 0 chrX 143430661 143430698 -23219598 + AT_rich Low_complexity Low_complexity 1 37 0 6 1679 230 67 100 0 chrX 143431559 143431619 -23218677 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 6 1679 1123 267 13 3 chrX 143431888 143432231 -23218065 - Lx5 LINE L1 -733 6727 6134 6 1679 26 0 0 0 chrX 143432539 143432565 -23217731 + AT_rich Low_complexity Low_complexity 1 26 0 6 1679 1016 129 11 0 chrX 143433326 143433504 -23216792 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 6 1679 540 0 0 0 chrX 143434294 143434354 -23215942 + (TC)n Simple_repeat Simple_repeat 1 60 0 6 1679 180 0 0 0 chrX 143434354 143434373 -23215923 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 1679 564 15 0 0 chrX 143434373 143434437 -23215859 + (GA)n Simple_repeat Simple_repeat 2 66 0 6 1679 387 0 0 0 chrX 143435448 143435491 -23214805 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1679 191 174 0 42 chrX 143435739 143435787 -23214509 + CT-rich Low_complexity Low_complexity 1 46 0 6 1679 271 281 47 168 chrX 143438206 143438269 -23212027 + B4 SINE B4 38 223 -67 6 1679 313 192 0 206 chrX 143438255 143438386 -23211910 + MT2B LTR ERVL 161 264 -337 6 1679 716 147 0 87 chrX 143438269 143438418 -23211878 + B1_Mur3 SINE Alu 11 146 -3 6 1679 257 197 15 0 chrX 143438451 143438517 -23211779 + GA-rich Low_complexity Low_complexity 2 68 0 6 1679 1198 68 0 0 chrX 143438898 143439045 -23211251 + B1_Mus2 SINE Alu 1 147 0 6 1679 211 107 17 35 chrX 143439053 143439111 -23211185 + (CAAA)n Simple_repeat Simple_repeat 1 57 0 6 1679 451 122 0 0 chrX 143439293 143439367 -23210929 + L1_Mus3 LINE L1 6558 6631 -7 6 1679 3866 57 0 0 chrX 143439480 143439957 -23210339 + L1_Mus1 LINE L1 6091 6567 0 6 1679 1075 175 35 18 chrX 143440080 143440307 -23209989 - L1Md_T LINE L1 -1 6581 6351 6 1679 516 70 42 0 chrX 143440308 143440379 -23209917 + L1_Mm LINE L1 5457 5530 -353 6 1679 354 263 21 64 chrX 143440875 143440912 -23209384 + (CAGAGA)n Simple_repeat Simple_repeat 2 33 0 6 1679 585 0 0 0 chrX 143440912 143440977 -23209319 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 6 1679 354 263 21 64 chrX 143440977 143441126 -23209170 + (CAGAGA)n Simple_repeat Simple_repeat 4 150 0 6 1679 189 324 41 27 chrX 143443494 143443567 -23206729 - MIR3 SINE MIR -48 160 87 6 1679 874 240 19 10 chrX 143444331 143444537 -23205759 + B3 SINE B2 4 211 -5 6 1679 306 163 0 0 chrX 143445141 143445190 -23205106 + L2a LINE L2 3378 3426 0 6 1679 385 250 11 11 chrX 143446154 143446243 -23204053 - ID_B1 SINE B4 -6 218 130 6 1679 1334 198 23 0 chrX 143446539 143446797 -23203499 - Lx9 LINE L1 -563 7081 6818 6 1679 477 0 0 0 chrX 143446835 143446888 -23203408 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1679 341 228 10 0 chrX 143446901 143447002 -23203294 + Lx9 LINE L1 7543 7644 0 6 1679 415 316 64 57 chrX 143447535 143447676 -23202620 - ID_B1 SINE B4 -7 217 76 6 1679 210 352 14 40 chrX 143449103 143449177 -23201119 - ID2 SINE ID -11 72 1 6 1679 377 167 13 0 chrX 143449280 143449358 -23200938 + GA-rich Low_complexity Low_complexity 3 81 0 6 1679 230 222 16 16 chrX 143449434 143449498 -23200798 + L1MC4a LINE L1 7728 7791 -91 6 1679 196 77 51 0 chrX 143450126 143450165 -23200131 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 6 1679 464 165 35 0 chrX 143450261 143450376 -23199920 + CT-rich Low_complexity Low_complexity 2 120 0 6 1679 225 154 0 0 chrX 143450375 143450414 -23199882 + (TA)n Simple_repeat Simple_repeat 2 40 0 6 1679 29 28 0 0 chrX 143450761 143450797 -23199499 + AT_rich Low_complexity Low_complexity 1 36 0 6 1679 25 0 0 0 chrX 143451207 143451232 -23199064 + AT_rich Low_complexity Low_complexity 1 25 0 6 1679 2316 50 0 16 chrX 143451241 143451548 -23198748 - L1Md_F2 LINE L1 -12 6570 6269 6 1679 204 67 0 0 chrX 143451970 143452000 -23198296 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1679 21 0 0 0 chrX 143452000 143452021 -23198275 + AT_rich Low_complexity Low_complexity 1 21 0 6 1679 1717 46 0 5 chrX 143452080 143452300 -23197996 - L1_Mus1 LINE L1 -1 6566 6348 6 1679 449 47 0 15 chrX 143452327 143452392 -23197904 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 1679 4560 70 68 27 chrX 143452392 143453068 -23197228 - L1_Mur1 LINE L1 -318 5568 4865 6 1679 23 0 0 0 chrX 143454737 143454760 -23195536 + AT_rich Low_complexity Low_complexity 1 23 0 6 1679 7970 47 11 0 chrX 143455376 143457072 -23193224 - L1Md_F2 LINE L1 0 6582 4868 6 1679 268 311 0 0 chrX 143457794 143457855 -23192441 + ID4 SINE ID 20 80 -3 6 1679 672 13 0 0 chrX 143457912 143457989 -23192307 + (TA)n Simple_repeat Simple_repeat 1 77 0 6 1679 23 0 0 0 chrX 143460072 143460095 -23190201 + AT_rich Low_complexity Low_complexity 1 23 0 6 1679 1176 189 4 26 chrX 143460606 143460834 -23189462 + URR1B DNA MER1_type 3 225 0 6 1679 2734 114 34 115 chrX 143460857 143461422 -23188874 + MURVY-LTR LTR ERV1 1 519 0 6 1679 1449 102 14 0 chrX 143463007 143463223 -23187073 + L1_Mus2 LINE L1 6348 6566 0 6 1679 239 202 0 11 chrX 143463254 143463349 -23186947 + (TA)n Simple_repeat Simple_repeat 1 94 0 6 1679 301 225 0 0 chrX 143463350 143463439 -23186857 + (TAGA)n Simple_repeat Simple_repeat 2 90 0 7 1679 952 40 0 24 chrX 143463439 143463566 -23186730 - B1_Mus1 SINE Alu -1 147 24 7 1679 360 0 0 0 chrX 143463701 143463741 -23186555 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 1679 267 31 0 0 chrX 143463741 143463773 -23186523 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 1679 286 235 11 56 chrX 143463791 143463881 -23186415 + BC1_Mm scRNA scRNA 14 99 -53 7 1679 21 0 0 0 chrX 143464533 143464554 -23185742 + AT_rich Low_complexity Low_complexity 1 21 0 7 1679 188 354 167 0 chrX 143466473 143466569 -23183727 - MIR3 SINE MIR -3 205 94 7 1679 1264 167 33 81 chrX 143466665 143466997 -23183299 - RMER6C LTR ERVK -53 637 322 7 1679 1075 79 0 0 chrX 143467008 143467147 -23183149 - B1_Mus1 SINE Alu -9 139 1 7 1679 651 53 255 0 chrX 143467186 143467317 -23182979 - L1_Mus2 LINE L1 -104 6550 6339 7 1679 1313 137 205 4 chrX 143467338 143467587 -23182709 - RMER6C LTR ERVK -391 299 1 7 1679 351 39 0 0 chrX 143468780 143468831 -23181465 - L1_Mus3 LINE L1 -10 6628 6578 7 1679 453 246 18 0 chrX 143468907 143469017 -23181279 - PB1D10 SINE Alu -5 112 1 7 1679 1532 112 8 23 chrX 143470290 143470546 -23179750 + L1_Mus4 LINE L1 6379 6630 -6 7 1679 237 327 100 26 chrX 143470638 143470772 -23179524 + B1F SINE Alu 8 148 -1 7 1679 300 278 39 58 chrX 143471627 143471730 -23178566 - B1F1 SINE Alu -24 125 25 7 1679 548 228 9 0 chrX 143471846 143471960 -23178336 - RSINE1 SINE B4 -50 115 1 7 1679 8203 99 19 2 chrX 143472996 143474175 -23176121 - L1_Mus1 LINE L1 -145 5738 4539 7 1679 5037 91 6 0 chrX 143474175 143474869 -23175427 + L1_Mus1 LINE L1 5870 6567 0 7 1679 264 367 73 0 chrX 143475190 143475340 -23174956 - ORR1E LTR MaLR 0 370 210 7 1679 200 195 0 0 chrX 143475358 143475399 -23174897 + (TTAGGG)n Simple_repeat Simple_repeat 1 41 0 7 1679 473 349 54 63 chrX 143475399 143475604 -23174692 - ORR1E LTR MaLR -154 205 3 7 1679 196 304 96 29 chrX 143475648 143475776 -23174520 - MIR SINE MIR -39 229 90 7 1679 233 185 154 0 chrX 143476038 143476103 -23174193 - L2a LINE L2 -5 3421 3347 7 1679 292 269 0 43 chrX 143476879 143476949 -23173347 - MER20 DNA MER1_type -152 67 1 7 1679 22 0 0 0 chrX 143477705 143477727 -23172569 + AT_rich Low_complexity Low_complexity 1 22 0 7 1679 1772 81 4 15 chrX 143478068 143478330 -23171966 + L1Md_F2 LINE L1 6324 6582 0 7 1679 31 96 0 0 chrX 143480381 143480475 -23169821 + AT_rich Low_complexity Low_complexity 1 94 0 7 1679 769 116 0 26 chrX 143480778 143480929 -23169367 + Lx LINE L1 6508 6654 0 7 1679 681 205 25 56 chrX 143481062 143481258 -23169038 - L1MA8 LINE L1 -267 6024 5835 7 1679 21 0 0 0 chrX 143481644 143481665 -23168631 + AT_rich Low_complexity Low_complexity 1 21 0 7 1679 198 0 0 0 chrX 143481818 143481840 -23168456 + (CAA)n Simple_repeat Simple_repeat 3 24 0 7 1679 8710 14 0 0 chrX 143481935 143483429 -23166867 - L1Md_A LINE L1 0 6582 5089 7 1679 11935 14 0 0 chrX 143483426 143484797 -23165499 + L1Md_A LINE L1 3741 5111 -772 7 1679 1015 83 0 52 chrX 143484918 143485071 -23165225 + B1_Mus2 SINE Alu 3 147 0 7 1679 423 0 0 0 chrX 143485257 143485304 -23164992 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1679 522 257 27 27 chrX 143485320 143485468 -23164828 + B1_Mur3 SINE Alu 1 148 -1 7 1679 261 75 0 0 chrX 143485473 143485513 -23164783 + (CAAAA)n Simple_repeat Simple_repeat 3 42 0 7 1679 2499 253 82 19 chrX 143486270 143486906 -23163390 + Lx6 LINE L1 6752 7427 -33 7 1679 314 307 49 80 chrX 143488259 143488422 -23161874 - RSINE1 SINE B4 -3 162 5 7 1679 662 342 50 21 chrX 143488606 143488662 -23161634 - MLT1E2 LTR MaLR -7 620 565 7 1679 3450 91 76 20 chrX 143488662 143489199 -23161097 + RMER2 LTR ERV1 1 567 0 7 1679 662 342 50 21 chrX 143489199 143489423 -23160873 - MLT1E2 LTR MaLR -63 564 332 7 1679 264 195 94 35 chrX 143489431 143489516 -23160780 - RMER15 LTR ERVL -122 453 364 7 1679 223 391 35 0 chrX 143490240 143490327 -23159969 - PB1D10 SINE Alu -9 108 19 7 1679 6559 175 21 11 chrX 143490696 143491910 -23158386 - Lx4B LINE L1 0 7058 5833 7 1679 259 286 12 38 chrX 143492130 143492210 -23158086 + ID_B1 SINE B4 140 217 -7 7 1679 249 57 0 0 chrX 143493808 143493843 -23156453 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1679 1034 73 0 0 chrX 143493843 143493979 -23156317 - B1_Mus2 SINE Alu -11 136 1 7 1679 248 247 11 21 chrX 143495596 143495691 -23154605 - Lx7 LINE L1 -2 7694 7601 7 1679 1589 154 10 13 chrX 143495938 143496241 -23154055 - Lx LINE L1 0 6654 6353 7 1679 24 32 0 0 chrX 143496331 143496362 -23153934 + AT_rich Low_complexity Low_complexity 1 31 0 7 1679 303 219 45 38 chrX 143496642 143496775 -23153521 - Lx9 LINE L1 -2 7642 7509 7 1679 221 83 28 0 chrX 143496778 143496814 -23153482 + (CATA)n Simple_repeat Simple_repeat 2 38 0 7 1679 453 294 98 6 chrX 143496828 143496992 -23153304 - Lx9 LINE L1 -201 7443 7265 7 1679 1746 76 7 44 chrX 143497010 143497021 -23153275 - Lx3A LINE L1 -6 6975 6966 7 1679 240 35 0 0 chrX 143497021 143497050 -23153246 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 7 1679 1746 76 7 44 chrX 143497050 143497312 -23152984 - Lx3A LINE L1 -16 6965 6712 7 1679 1265 106 0 5 chrX 143497556 143497745 -23152551 + B2_Mm2 SINE B2 2 189 -6 7 1679 917 238 4 26 chrX 143498399 143498628 -23151668 - URR1B DNA MER1_type 0 225 2 7 1679 254 278 32 43 chrX 143500000 143500094 -23150202 + L2b LINE L2 3287 3412 -14 1 1679 411 21 0 0 chrX 143500508 143500556 -23149740 + (TTGG)n Simple_repeat Simple_repeat 4 51 0 2 1679 585 0 0 0 chrX 143501679 143501744 -23148552 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 3 1679 230 310 20 20 chrX 143501884 143501986 -23148310 - Lx8 LINE L1 -8 7465 7364 4 1679 228 296 50 10 chrX 143502111 143502210 -23148086 - Lx8 LINE L1 -391 7082 6980 4 1679 343 309 0 0 chrX 143502333 143502414 -23147882 + RSINE1 SINE B4 3 83 -82 5 1679 467 118 12 0 chrX 143502429 143502514 -23147782 + (CA)n Simple_repeat Simple_repeat 2 87 0 6 1679 1123 55 0 33 chrX 143502820 143502971 -23147325 - B1_Mus2 SINE Alu -1 146 1 7 1679 2316 137 0 44 chrX 143502971 143503375 -23146921 - Lx LINE L1 -9 6645 6258 8 1679 201 244 0 0 chrX 143503523 143503564 -23146732 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 1679 396 0 0 0 chrX 143505624 143505668 -23144628 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1679 28 48 0 0 chrX 143506531 143506573 -23143723 + AT_rich Low_complexity Low_complexity 1 42 0 1 1679 452 33 0 32 chrX 143507791 143507854 -23142442 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 1 1679 4763 195 27 6 chrX 143507910 143508874 -23141422 - Lx3C LINE L1 -2 6974 5991 1 1679 207 119 0 67 chrX 143509774 143509819 -23140477 + A-rich Low_complexity Low_complexity 4 45 0 1 1679 21 0 0 0 chrX 143509862 143509883 -23140413 + AT_rich Low_complexity Low_complexity 1 21 0 1 1679 207 348 9 57 chrX 143509885 143510021 -23140275 + MIRb SINE MIR 32 165 -97 1 1679 459 0 0 0 chrX 143510037 143510088 -23140208 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1679 238 237 34 0 chrX 143511005 143511064 -23139232 - ID4_ SINE ID -19 64 4 1 1679 806 234 9 119 chrX 143511380 143511598 -23138698 + B3 SINE B2 23 216 0 1 1679 27 0 0 0 chrX 143511609 143511636 -23138660 + AT_rich Low_complexity Low_complexity 1 27 0 2 1679 227 311 0 0 chrX 143511649 143511710 -23138586 - PB1 SINE Alu -58 69 9 2 1679 906 67 33 0 chrX 143512277 143512427 -23137869 + Lx3_Mus LINE L1 6846 7000 -9 2 1679 1708 51 0 0 chrX 143512783 143512999 -23137297 + L1Md_A LINE L1 6367 6582 0 2 1679 22 0 0 0 chrX 143513421 143513443 -23136853 + AT_rich Low_complexity Low_complexity 1 22 0 2 1679 342 115 0 0 chrX 143513613 143513665 -23136631 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 2 1679 27 0 0 0 chrX 143513991 143514018 -23136278 + AT_rich Low_complexity Low_complexity 1 27 0 2 1679 5890 108 8 3 chrX 143514090 143514951 -23135345 - L1_Mus4 LINE L1 -5 6631 5767 2 1679 510 278 109 17 chrX 143515217 143515619 -23134677 + L1M5 LINE L1 4257 4695 -1451 2 1679 286 259 0 0 chrX 143515641 143515699 -23134597 + B4A SINE B4 26 83 -209 2 1679 315 0 0 0 chrX 143515847 143515882 -23134414 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1679 394 316 110 18 chrX 143515995 143516214 -23134082 + L1MD LINE L1 4862 5100 -1046 3 1679 25 31 0 0 chrX 143516840 143516872 -23133424 + AT_rich Low_complexity Low_complexity 1 32 0 3 1679 418 258 86 25 chrX 143517073 143517236 -23133060 - Lx4B LINE L1 -4 7054 6882 3 1679 1554 77 19 5 chrX 143517236 143517445 -23132851 - ORR1A2 LTR MaLR -7 320 109 3 1679 601 200 167 6 chrX 143517446 143517602 -23132694 - Lx4B LINE L1 -696 6362 6182 3 1679 11362 160 13 66 chrX 143517601 143517824 -23132472 - L1_Mur2 LINE L1 -1082 4795 4603 3 1679 1313 157 0 9 chrX 143517824 143518049 -23132247 - Lx2 LINE L1 0 6997 6775 3 1679 11362 160 13 66 chrX 143518049 143519748 -23130548 - L1_Mur2 LINE L1 -1275 4602 3004 3 1679 2175 150 8 6 chrX 143519748 143520111 -23130185 - Lx2 LINE L1 0 6997 6634 3 1679 11362 160 13 66 chrX 143520111 143520613 -23129683 - L1_Mur2 LINE L1 -2874 3003 2498 3 1679 2621 217 105 25 chrX 143520616 143521509 -23128787 - L1_Mur2 LINE L1 -4052 1825 861 3 1679 212 167 0 111 chrX 143522888 143522942 -23127354 - MIRb SINE MIR -161 107 60 3 1679 337 215 0 48 chrX 143523031 143523114 -23127182 + ID4 SINE ID 4 82 -1 3 1679 23 54 0 0 chrX 143523490 143523527 -23126769 + AT_rich Low_complexity Low_complexity 1 37 0 4 209 183 42 0 0 chrX 143523829 143523853 -23126443 + (TTTTTA)n Simple_repeat Simple_repeat 2 25 0 4 1680 519 316 20 20 chrX 143523949 143524149 -23126147 - Lx9 LINE L1 -172 7472 7273 4 1680 319 248 0 54 chrX 143524191 143524302 -23125994 - Lx9 LINE L1 -8 7636 7532 4 1680 401 272 61 10 chrX 143525169 143525366 -23124930 + L1MA6 LINE L1 6077 6283 -17 4 1680 354 324 152 11 chrX 143525782 143525960 -23124336 + B3 SINE B2 1 203 -13 4 1680 266 135 39 0 chrX 143525960 143526012 -23124284 + (CATA)n Simple_repeat Simple_repeat 3 56 0 4 1680 24 32 0 0 chrX 143526012 143526043 -23124253 + AT_rich Low_complexity Low_complexity 1 31 0 4 1680 582 319 83 5 chrX 143526053 143526245 -23124051 + B4A SINE B4 1 207 -85 4 1680 755 234 117 0 chrX 143526682 143526853 -23123443 + B3 SINE B2 6 196 -20 4 1680 28 0 0 0 chrX 143526857 143526885 -23123411 + AT_rich Low_complexity Low_complexity 1 28 0 5 1680 1252 88 0 0 chrX 143527067 143527237 -23123059 - L1_Mus1 LINE L1 -1 6566 6397 5 1680 3366 208 12 12 chrX 143527495 143528182 -23122114 - Lx5 LINE L1 -17 7033 6347 5 1680 7575 160 41 15 chrX 143528182 143528904 -23121392 - L1_Mur2 LINE L1 -3079 2798 2068 5 1680 183 80 0 0 chrX 143528904 143528929 -23121367 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 1680 7575 160 41 15 chrX 143528929 143529363 -23120933 - L1_Mur2 LINE L1 -3810 2067 1620 5 1680 1076 83 14 0 chrX 143529363 143529507 -23120789 - B1_Mus2 SINE Alu 0 147 2 5 1680 462 18 0 0 chrX 143529509 143529564 -23120732 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1680 7575 189 155 10 chrX 143529564 143530188 -23120108 - L1_Mur2 LINE L1 -4258 1619 901 5 1680 886 300 124 49 chrX 143530444 143530935 -23119361 - Lx8 LINE L1 -187 7286 6759 5 1680 350 243 0 13 chrX 143530939 143531014 -23119282 - RMER15-int LTR ERVL -363 4636 4563 5 1680 533 179 110 28 chrX 143531039 143531148 -23119148 + B1_Mur1 SINE Alu 32 149 0 5 1680 249 278 65 93 chrX 143531240 143531379 -23118917 - MLT1D LTR MaLR -298 207 73 6 1680 359 275 33 81 chrX 143531509 143531719 -23118577 + L1MD LINE L1 5269 5468 -774 6 1680 849 248 46 21 chrX 143531992 143532231 -23118065 - Lx6 LINE L1 -1 7459 7215 6 1680 206 136 0 22 chrX 143532297 143532342 -23117954 + (TTG)n Simple_repeat Simple_repeat 2 45 0 6 1680 4144 151 9 6 chrX 143533320 143533999 -23116297 - Lx2B LINE L1 0 7000 6320 6 1680 2052 169 63 0 chrX 143534001 143534379 -23115917 + Lx2 LINE L1 5878 6279 -718 6 1680 21 0 0 0 chrX 143534604 143534625 -23115671 + AT_rich Low_complexity Low_complexity 1 21 0 6 1680 479 297 62 43 chrX 143535212 143535374 -23114922 + B4A SINE B4 6 170 -122 6 1680 405 0 0 0 chrX 143535381 143535426 -23114870 + (TC)n Simple_repeat Simple_repeat 1 45 0 6 1680 1709 202 37 3 chrX 143536288 143536640 -23113656 - ORR1B2 LTR MaLR -3 364 1 6 1680 7035 173 50 10 chrX 143536640 143538090 -23112206 - ORR1B2-int LTR MaLR -1 1508 1 6 1680 1791 213 8 3 chrX 143538090 143538453 -23111843 - ORR1B2 LTR MaLR 0 367 3 6 1680 3124 71 7 23 chrX 143539176 143539610 -23110686 - L1_Mus1 LINE L1 0 6567 6141 7 1680 485 271 22 43 chrX 143539867 143540052 -23110244 - Lx5 LINE L1 -997 6053 5873 7 1680 2348 145 11 128 chrX 143540374 143540928 -23109368 - RLTR13D1 LTR ERVK 0 806 318 7 1680 870 280 44 25 chrX 143541095 143541370 -23108926 - Lx8 LINE L1 -2 7471 7192 7 1680 196 330 19 58 chrX 143541733 143541836 -23108460 + L3 LINE CR1 4385 4483 -6 7 1680 24 67 0 0 chrX 143542006 143542051 -23108245 + AT_rich Low_complexity Low_complexity 1 45 0 7 1680 481 41 27 0 chrX 143542187 143542260 -23108036 - L1Md_F3 LINE L1 0 6584 6510 7 1680 1824 306 85 32 chrX 143543164 143544654 -23105642 - Lx8 LINE L1 -529 6944 5339 7 1680 35315 35 1 0 chrX 143544657 143549864 -23100432 + L1Md_T LINE L1 278 5589 -297 7 1680 8949 7 0 0 chrX 143549864 143550860 -23099436 + L1Md_T LINE L1 5590 6585 0 7 1680 738 291 7 18 chrX 143550910 143551187 -23099109 - L1M2 LINE L1 -1372 4771 4498 7 1680 749 282 39 15 chrX 143551210 143551415 -23098881 - ORR1D2 LTR MaLR -3 367 158 7 1680 1327 57 0 0 chrX 143551415 143551574 -23098722 - L1Md_T LINE L1 -377 6205 6047 8 1680 678 328 0 6 chrX 143551585 143551766 -23098530 - ORR1D2 LTR MaLR -189 181 2 7 1680 713 287 130 7 chrX 143551767 143552206 -23098090 - Lx8 LINE L1 -1430 4450 3958 7 1680 1013 263 107 58 chrX 143552208 143552741 -23097555 + Lx7 LINE L1 7118 7676 -20 8 1680 1031 116 0 0 chrX 143552747 143552893 -23097403 - B1_Mus2 SINE Alu 0 147 2 8 1680 2791 58 3 6 chrX 143552913 143553275 -23097021 - L1_Mus1 LINE L1 0 6567 6207 8 1680 333 140 0 0 chrX 143553347 143553404 -23096892 + (TTA)n Simple_repeat Simple_repeat 1 57 0 8 1680 1083 108 0 0 chrX 143553404 143553552 -23096744 - B1_Mus1 SINE Alu 0 148 1 8 1680 22 0 0 0 chrX 143553752 143553774 -23096522 + AT_rich Low_complexity Low_complexity 1 22 0 8 1680 2834 79 8 10 chrX 143554791 143555186 -23095110 + L1Md_F2 LINE L1 6177 6570 -12 8 1680 6636 66 17 5 chrX 143555451 143556321 -23093975 - L1Md_F2 LINE L1 0 6582 5702 8 1680 218 32 0 31 chrX 143556460 143556492 -23093804 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 8 1680 585 42 0 0 chrX 143556660 143556732 -23093564 + (TCC)n Simple_repeat Simple_repeat 2 73 0 9 1680 490 260 36 51 chrX 143556920 143557058 -23093238 + B1_Mur3 SINE Alu 14 149 0 9 1680 203 61 30 0 chrX 143557224 143557257 -23093039 + (TTA)n Simple_repeat Simple_repeat 3 36 0 9 1680 460 331 65 61 chrX 143557306 143557827 -23092469 - L1M4 LINE L1 -5914 628 106 9 1680 1191 302 65 6 chrX 143558089 143558442 -23091854 - MTEa LTR MaLR 0 379 6 9 1680 1365 270 89 50 chrX 143558504 143559000 -23091296 + Lx6 LINE L1 6945 7459 -1 9 1680 1317 233 40 14 chrX 143559171 143559476 -23090820 - MTD LTR MaLR -14 405 105 9 1680 495 78 0 0 chrX 143559493 143559570 -23090726 + (TC)n Simple_repeat Simple_repeat 2 78 0 9 1680 1102 98 0 71 chrX 143559592 143559789 -23090507 - Lx3B LINE L1 -59 6914 6732 9 1680 462 236 9 0 chrX 143559822 143559932 -23090364 - MTC-int LTR MaLR 0 1258 1148 9 1680 21 57 0 0 chrX 143559942 143559977 -23090319 + AT_rich Low_complexity Low_complexity 1 35 0 1 1680 2371 259 180 51 chrX 143560094 143561057 -23089239 - MTC-int LTR MaLR -113 1145 59 9 1680 6964 63 8 2 chrX 143561137 143562037 -23088259 + L1Md_F2 LINE L1 5666 6570 -12 1 1680 2816 92 16 35 chrX 143562041 143562471 -23087825 + Lx3A LINE L1 6555 6976 -5 1 1680 21 0 0 0 chrX 143562472 143562493 -23087803 + AT_rich Low_complexity Low_complexity 1 21 0 1 1680 234 169 0 0 chrX 143562495 143562560 -23087736 + A-rich Low_complexity Low_complexity 1 65 0 1 1680 1109 76 0 14 chrX 143563405 143563552 -23086744 + B1_Mus2 SINE Alu 3 147 0 1 1680 641 284 107 52 chrX 143565029 143565510 -23084786 - L1_Mur3 LINE L1 -66 5814 5336 1 1680 3968 139 39 2 chrX 143565522 143566162 -23084134 - Lx4A LINE L1 -3 7055 6392 1 1680 4256 85 3 13 chrX 143566547 143567144 -23083152 + L1_Mus3 LINE L1 6046 6636 -2 1 1680 8184 46 3 2 chrX 143567587 143569074 -23081222 - L1Md_F3 LINE L1 -2 6582 5094 1 1680 1234 148 19 0 chrX 143569074 143569284 -23081012 - Lx LINE L1 -14 6640 6427 1 1680 1509 242 35 54 chrX 143569301 143569724 -23080572 - MTD LTR MaLR -4 415 1 1 1680 312 239 50 71 chrX 143569729 143569828 -23080468 - MTD-int LTR MaLR -5 1253 1157 1 1680 2175 183 58 5 chrX 143569807 143570218 -23080078 - RLTR11A LTR ERVK -95 433 1 1 1680 2833 259 84 28 chrX 143570218 143571127 -23079169 - MTD-int LTR MaLR -400 970 11 1 1680 915 210 14 89 chrX 143571122 143571336 -23078960 - MTD LTR MaLR -180 198 1 1 1680 450 309 13 32 chrX 143571558 143571712 -23078584 + RSINE1 SINE B4 3 153 -12 1 1680 267 292 14 0 chrX 143571824 143571896 -23078400 + ID4 SINE ID 2 74 -9 1 1680 566 331 0 0 chrX 143572665 143572807 -23077489 - ID_B1 SINE B4 -4 220 79 1 1680 601 273 43 19 chrX 143572968 143573177 -23077119 + Lx7 LINE L1 7041 7254 -442 1 1680 3018 182 84 7 chrX 143573253 143573851 -23076445 - Lx4B LINE L1 -135 6923 6280 1 1680 577 133 91 8 chrX 143573849 143573970 -23076326 + MusHAL1 LINE L1 1861 1991 -721 1 1680 371 241 41 82 chrX 143573966 143574088 -23076208 + Lx7 LINE L1 7247 7363 -333 1 1680 505 214 101 50 chrX 143574123 143574338 -23075958 + Lx7 LINE L1 7507 7690 -6 1 1680 412 213 16 0 chrX 143574539 143574661 -23075635 + (TA)n Simple_repeat Simple_repeat 2 125 0 1 1680 219 260 0 40 chrX 143574666 143574742 -23075554 + L2a LINE L2 3259 3331 -95 1 1680 240 279 15 0 chrX 143575550 143575618 -23074678 - Lx8 LINE L1 -253 7220 7152 1 1680 1865 281 73 16 chrX 143575973 143576545 -23073751 - Lx8 LINE L1 -286 7187 6583 1 1680 820 201 112 29 chrX 143576955 143577031 -23073265 - L1_Rod LINE L1 -6535 637 541 1 1680 605 22 33 11 chrX 143577031 143577123 -23073173 + (TTTTG)n Simple_repeat Simple_repeat 2 95 0 1 1680 820 275 66 20 chrX 143577123 143577492 -23072804 - L1_Rod LINE L1 -6632 540 77 1 1680 1197 74 0 0 chrX 143577586 143577748 -23072548 - L1_Mus1 LINE L1 0 6567 6406 1 1680 880 82 15 0 chrX 143578401 143578536 -23071760 - L1Md_F3 LINE L1 -1 6583 6447 1 1680 501 50 0 0 chrX 143578536 143578596 -23071700 - L1_Mm LINE L1 -337 5546 5487 1 1680 4552 60 2 0 chrX 143578596 143579181 -23071115 + L1_Mm LINE L1 4783 5368 -515 1 1680 21 0 0 0 chrX 143579182 143579203 -23071093 + AT_rich Low_complexity Low_complexity 1 21 0 1 1680 22 0 0 0 chrX 143579270 143579292 -23071004 + AT_rich Low_complexity Low_complexity 1 22 0 1 1680 363 213 69 69 chrX 143579344 143579475 -23070821 + B1_Mur2 SINE Alu 12 142 -7 1 1680 249 57 0 0 chrX 143579714 143579749 -23070547 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1 1680 831 145 8 0 chrX 143579749 143579880 -23070416 - B1_Mus2 SINE Alu -13 134 3 1 1680 22 35 0 0 chrX 143581965 143581994 -23068302 + AT_rich Low_complexity Low_complexity 1 29 0 1 1680 380 232 68 51 chrX 143582564 143582682 -23067614 + B1_Mur2 SINE Alu 23 142 -7 1 1680 208 261 0 0 chrX 143582849 143582895 -23067401 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 1 1680 393 22 0 0 chrX 143582932 143582978 -23067318 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1 1680 820 138 22 0 chrX 143582990 143583128 -23067168 - B1_Mus2 SINE Alu -5 142 2 1 1680 15716 51 21 3 chrX 143584084 143586807 -23063489 - L1Md_F3 LINE L1 -14 6570 3790 1 1680 263 206 124 131 chrX 143588451 143588596 -23061700 + MT2B LTR ERVL 114 257 -344 1 1680 345 225 77 51 chrX 143588516 143588633 -23061663 + B1_Mur2 SINE Alu 23 142 -7 1 1680 266 87 22 0 chrX 143588871 143588917 -23061379 + (TTTA)n Simple_repeat Simple_repeat 1 47 0 1 1680 817 144 22 0 chrX 143588930 143589069 -23061227 - B1_Mus2 SINE Alu -4 143 2 1 1680 1112 84 0 0 chrX 143594340 143594482 -23055814 + B1_Mus2 SINE Alu 1 142 -5 1 1680 410 345 60 0 chrX 143594680 143594915 -23055381 - L1M5 LINE L1 -2202 3944 3696 1 1680 278 326 69 67 chrX 143594979 143595455 -23054841 - L1_Rod LINE L1 -2947 2900 2424 1 1680 723 273 238 22 chrX 143596346 143596657 -23053639 - MTEb LTR MaLR 0 379 2 1 1680 682 175 67 83 chrX 143597623 143597816 -23052480 + B2_Mm2 SINE B2 6 195 0 1 1680 3953 70 6 2 chrX 143598391 143598908 -23051388 - L1_Mus2 LINE L1 -1 6565 6047 1 1680 1986 40 16 0 chrX 143598908 143599157 -23051139 + L1_Mus2 LINE L1 5753 6005 -561 1 1680 324 294 0 44 chrX 143600359 143600473 -23049823 + BC1_Mm scRNA scRNA 3 111 -41 1 1680 330 377 40 27 chrX 143600629 143600779 -23049517 + B4 SINE B4 77 228 -64 1 1680 443 168 11 0 chrX 143600781 143600876 -23049420 + GA-rich Low_complexity Low_complexity 2 97 0 1 1680 281 113 48 0 chrX 143600908 143600970 -23049326 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 1 1680 228 319 106 29 chrX 143601421 143601506 -23048790 + L1M4c LINE L1 1107 1197 -5281 1 1680 356 0 23 0 chrX 143601506 143601550 -23048746 + (TTG)n Simple_repeat Simple_repeat 2 46 0 1 1680 258 284 80 40 chrX 143601550 143601842 -23048454 + L1M4c LINE L1 1198 1512 -4966 1 1680 943 104 18 0 chrX 143602393 143602547 -23047749 + B2_Mm2 SINE B2 2 169 -29 1 1680 181 279 108 25 chrX 143602581 143602739 -23047557 - L4 LINE RTE 0 2029 1859 1 1680 334 254 112 60 chrX 143602740 143603021 -23047275 + L1M4 LINE L1 3430 3632 -3009 1 1680 470 369 16 31 chrX 143603134 143603327 -23046969 + B3A SINE B2 1 190 -8 1 1680 290 316 20 7 chrX 143603435 143603588 -23046708 + L1M4 LINE L1 4718 4872 -1772 1 1680 711 285 20 25 chrX 143603689 143603934 -23046362 + L1MB5 LINE L1 5911 6154 -20 1 1680 476 287 54 47 chrX 143605880 143606176 -23044120 - L1M4b LINE L1 -1718 5288 4991 1 1680 258 266 77 57 chrX 143606324 143606571 -23043725 - L1M4b LINE L1 -2112 4894 4643 1 1680 394 316 120 37 chrX 143606573 143606818 -23043478 - L1MC LINE L1 -2374 3772 3500 1 1680 486 0 0 0 chrX 143606818 143606872 -23043424 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1680 394 316 120 37 chrX 143606872 143607033 -23043263 - L1MC LINE L1 -2647 3499 3332 1 1680 823 296 70 43 chrX 143607228 143607402 -23042894 - L1M4b LINE L1 -3037 3969 3790 1 1680 1770 91 0 12 chrX 143607402 143607657 -23042639 - L1_Mus1 LINE L1 0 6567 6316 1 1680 823 296 70 43 chrX 143607657 143608126 -23042170 - L1M4b LINE L1 -3217 3789 3309 1 1680 432 292 120 15 chrX 143608250 143608657 -23041639 - L1M4b LINE L1 -5180 2154 1705 1 1680 312 269 63 63 chrX 143608663 143608806 -23041490 - L1M4b LINE L1 -5585 1749 1607 1 1680 1347 268 111 24 chrX 143608828 143609140 -23041156 - L1MA4 LINE L1 -362 5938 5610 1 1680 186 43 0 0 chrX 143609140 143609163 -23041133 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1 1680 1347 266 113 24 chrX 143609163 143609944 -23040352 - L1MA4 LINE L1 -691 5609 4741 1 1680 248 272 12 0 chrX 143609962 143610043 -23040253 - L1MA4 LINE L1 -3118 3025 2944 1 1680 579 260 23 8 chrX 143610094 143610222 -23040074 + B3A SINE B2 2 131 -67 1 1680 5595 214 20 43 chrX 143610380 143611554 -23038742 - Lx5 LINE L1 -4 7046 5901 1 1680 522 0 0 0 chrX 143611645 143611703 -23038593 + (TC)n Simple_repeat Simple_repeat 2 59 0 1 1680 288 0 0 0 chrX 143611703 143611734 -23038562 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1680 310 360 107 23 chrX 143611772 143611988 -23038308 - L1M4b LINE L1 -6456 878 645 1 1680 2795 61 19 0 chrX 143612002 143612365 -23037931 - L1_Mus2 LINE L1 -14 6552 6183 1 1680 248 338 99 36 chrX 143612416 143612637 -23037659 - L1M4b LINE L1 -6759 575 341 1 1680 312 352 93 7 chrX 143612715 143612855 -23037441 - L1M4b LINE L1 -7078 256 105 1 1680 21 36 0 0 chrX 143613048 143613076 -23037220 + AT_rich Low_complexity Low_complexity 1 28 0 1 1680 648 323 133 40 chrX 143613198 143614118 -23036178 - L1M4 LINE L1 -5525 1017 13 1 1680 22 0 0 0 chrX 143614162 143614184 -23036112 + AT_rich Low_complexity Low_complexity 1 22 0 1 1680 285 143 14 41 chrX 143614185 143614226 -23036070 + polypyrimidine Low_complexity Low_complexity 32 71 0 1 1680 1152 106 0 0 chrX 143614226 143614396 -23035900 + (TTC)n Simple_repeat Simple_repeat 1 170 0 1 1680 285 143 14 41 chrX 143614396 143614427 -23035869 + polypyrimidine Low_complexity Low_complexity 1 31 0 1 1680 315 223 0 4 chrX 143614427 143614495 -23035801 - PB1D9 SINE Alu -43 106 41 1 1680 213 209 0 0 chrX 143614645 143614688 -23035608 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1680 265 336 99 16 chrX 143614706 143614827 -23035469 - B1F2 SINE Alu -18 131 1 1 1680 968 40 8 0 chrX 143615206 143615331 -23034965 + (TC)n Simple_repeat Simple_repeat 1 126 0 1 1680 288 0 0 0 chrX 143615331 143615362 -23034934 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1680 279 0 0 0 chrX 143615362 143615392 -23034904 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 1680 22 0 0 0 chrX 143615712 143615734 -23034562 + AT_rich Low_complexity Low_complexity 1 22 0 1 1680 656 355 100 45 chrX 143616270 143616979 -23033317 - L1MEf LINE L1 -4591 1609 862 1 1680 2163 66 0 14 chrX 143617187 143617480 -23032816 - L1Md_F2 LINE L1 -3 6579 6291 1 1680 1130 82 0 26 chrX 143618137 143618288 -23032008 + B1_Mus2 SINE Alu 1 147 0 1 1680 264 322 54 17 chrX 143618401 143618537 -23031759 + PB1D10 SINE Alu 1 147 0 1 1680 563 309 47 32 chrX 143618558 143618836 -23031460 - BGLII_B LTR ERVK -8 433 152 1 1680 3296 127 78 4 chrX 143618869 143619397 -23030899 - Lx3B LINE L1 0 6973 6407 1 1680 1025 88 0 0 chrX 143619397 143619544 -23030752 + Lx3C LINE L1 6200 6346 -630 1 1680 328 198 174 36 chrX 143619545 143619722 -23030574 - BGLII_B LTR ERVK -220 221 1 1 1680 512 238 101 4 chrX 143620348 143620576 -23029720 - Lx LINE L1 0 7696 7447 1 1680 242 79 26 0 chrX 143620640 143620678 -23029618 - Lx7 LINE L1 -366 7330 7292 1 1680 27 0 0 0 chrX 143620733 143620760 -23029536 + AT_rich Low_complexity Low_complexity 1 27 0 1 1680 1518 189 73 3 chrX 143621183 143621523 -23028773 - Lx LINE L1 -7 6647 6284 1 1680 815 199 119 0 chrX 143621792 143621993 -23028303 - URR1B DNA MER1_type 0 225 1 1 1680 2158 137 82 0 chrX 143622731 143623095 -23027201 - ORR1B1 LTR MaLR 0 394 1 1 1680 23 68 0 0 chrX 143624449 143624493 -23025803 + AT_rich Low_complexity Low_complexity 1 44 0 1 1680 21 71 0 0 chrX 143624839 143624881 -23025415 + AT_rich Low_complexity Low_complexity 1 42 0 1 1680 314 254 27 133 chrX 143625254 143625404 -23024892 - Charlie1a DNA MER1_type 0 1455 1322 2 1680 276 292 0 0 chrX 143625627 143625692 -23024604 + ID_B1 SINE B4 105 169 -55 2 1680 459 0 0 0 chrX 143625829 143625880 -23024416 + (TTA)n Simple_repeat Simple_repeat 1 51 0 2 1680 213 269 0 0 chrX 143625911 143625963 -23024333 + (TTG)n Simple_repeat Simple_repeat 2 53 0 2 1680 323 248 175 19 chrX 143626247 143626350 -23023946 + RSINE1 SINE B4 1 119 -46 2 1680 279 322 0 11 chrX 143627553 143627644 -23022652 + CT-rich Low_complexity Low_complexity 4 93 0 2 1680 405 0 0 0 chrX 143627733 143627778 -23022518 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1680 203 175 18 0 chrX 143629413 143629470 -23020826 + CT-rich Low_complexity Low_complexity 4 61 0 2 1680 23 0 0 0 chrX 143631791 143631814 -23018482 + AT_rich Low_complexity Low_complexity 1 23 0 2 1680 2261 174 16 0 chrX 143631902 143632360 -23017936 - Lx3C LINE L1 -967 6009 5548 2 1680 1728 233 112 33 chrX 143632375 143632895 -23017401 + Lx2B LINE L1 6440 7000 0 2 1680 23 54 0 0 chrX 143632962 143632999 -23017297 + AT_rich Low_complexity Low_complexity 1 37 0 2 1680 457 215 215 0 chrX 143633074 143633195 -23017101 - B1_Mus1 SINE Alu 0 148 2 2 1680 4161 55 40 0 chrX 143633544 143634112 -23016184 + L1Md_F2 LINE L1 4996 5586 -297 2 1680 8437 33 0 5 chrX 143634113 143635112 -23015184 + L1Md_F2 LINE L1 5588 6581 -1 2 1680 231 36 0 0 chrX 143635127 143635155 -23015141 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1680 22 0 0 0 chrX 143635282 143635304 -23014992 + AT_rich Low_complexity Low_complexity 1 22 0 2 1680 339 278 72 0 chrX 143635322 143635419 -23014877 - B1F SINE Alu -35 114 11 2 1680 3473 68 7 0 chrX 143635723 143636165 -23014131 + L1_Mus1 LINE L1 6122 6566 -1 2 1680 225 227 14 70 chrX 143636192 143636263 -23014033 + ID SINE ID 9 75 -149 2 1680 360 342 69 25 chrX 143636754 143636958 -23013338 + RMER20B LTR ERVK 180 392 -235 2 1680 546 16 0 0 chrX 143637252 143637315 -23012981 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1680 289 359 61 40 chrX 143637362 143637609 -23012687 - MER21B LTR ERV1 -144 719 468 2 1680 286 313 158 50 chrX 143637622 143637881 -23012415 + B4 SINE B4 6 292 0 2 1680 312 27 0 0 chrX 143637882 143637919 -23012377 + (GA)n Simple_repeat Simple_repeat 1 37 0 2 1680 2356 72 106 6 chrX 143638843 143639193 -23011103 + Lx LINE L1 6263 6647 -7 2 1680 6466 33 2 24 chrX 143639389 143640977 -23009319 + L1Md_A LINE L1 439 1984 -3899 2 1680 32001 47 17 19 chrX 143640978 143645660 -23004636 + L1Md_Gf LINE L1 109 4938 -948 2 1680 229 160 45 148 chrX 143645660 143645748 -23004548 - RMER20A LTR ERVK -268 248 170 2 1680 32001 47 17 19 chrX 143645748 143646378 -23003918 + L1Md_Gf LINE L1 4939 5589 -297 2 1680 8358 34 1 1 chrX 143646379 143647372 -23002924 + L1Md_T LINE L1 5588 6580 -2 2 1680 471 308 13 21 chrX 143647888 143648041 -23002255 - MTE2a LTR MaLR 0 379 207 2 1680 329 257 0 14 chrX 143648235 143648306 -23001990 - MTE2a LTR MaLR -301 78 9 2 1680 361 243 96 35 chrX 143648897 143649012 -23001284 - RMER15 LTR ERVL -132 443 322 2 1680 276 313 52 34 chrX 143649374 143649491 -23000805 + MER34 LTR ERV1 4 123 -448 2 1680 230 0 0 32 chrX 143649668 143649699 -23000597 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 2 1680 1698 149 119 42 chrX 143649861 143650246 -23000050 + RLTR9F LTR ERVK 1 415 0 2 1680 243 211 0 0 chrX 143650630 143650682 -22999614 + L1MB5 LINE L1 6054 6105 -69 2 1680 225 65 0 0 chrX 143650924 143650955 -22999341 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1680 1141 222 33 18 chrX 143651055 143651330 -22998966 + Lx7 LINE L1 7053 7331 -365 2 1680 410 257 81 6 chrX 143651410 143651582 -22998714 + Lx7 LINE L1 7512 7696 0 2 1680 366 320 40 0 chrX 143651737 143651837 -22998459 - RSINE1 SINE B4 -61 104 1 2 1680 1624 209 187 32 chrX 143653674 143654144 -22996152 - RMER15 LTR ERVL -4 571 29 2 26 2002 77 0 0 chrX 143654667 143654926 -22995370 + L1_Mus2 LINE L1 6304 6562 -4 2 1681 23 33 0 0 chrX 143654928 143654958 -22995338 + AT_rich Low_complexity Low_complexity 1 30 0 2 1681 1297 181 32 43 chrX 143654981 143655258 -22995038 - RLTR46 LTR ERVK -5 315 42 2 1681 376 304 35 49 chrX 143655303 143655445 -22994851 + ORR1D2 LTR MaLR 31 170 -209 2 1681 414 0 0 0 chrX 143655450 143655496 -22994800 + (TCTA)n Simple_repeat Simple_repeat 2 47 0 2 1681 4129 222 80 48 chrX 143655561 143656727 -22993569 - RLTR21 LTR ERVK -369 1203 1 2 1681 1394 259 9 6 chrX 143657097 143657443 -22992853 - Lx6 LINE L1 0 7460 7114 2 1681 884 74 31 6 chrX 143657609 143657772 -22992524 + (TAGA)n Simple_repeat Simple_repeat 4 170 0 2 1681 198 143 0 0 chrX 143657821 143657856 -22992440 + (TAGG)n Simple_repeat Simple_repeat 2 36 0 2 1681 24 0 0 0 chrX 143658354 143658378 -22991918 + AT_rich Low_complexity Low_complexity 1 24 0 2 1681 476 251 73 133 chrX 143658805 143659000 -22991296 + ORR1D2 LTR MaLR 208 402 -19 2 1681 361 291 1 21 chrX 143659148 143659318 -22990978 - L1MA4 LINE L1 -370 5930 5748 2 1681 182 171 24 0 chrX 143659322 143659363 -22990933 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 1681 244 291 93 11 chrX 143659380 143659603 -22990693 - L1MA4 LINE L1 -381 5793 5480 2 1681 449 272 145 1 chrX 143659602 143659816 -22990480 + L1M2 LINE L1 4163 4402 -1738 2 1681 355 312 39 5 chrX 143659818 143659960 -22990336 + B4A SINE B4 1 150 -142 2 1681 276 326 15 8 chrX 143660016 143660149 -22990147 + (CATA)n Simple_repeat Simple_repeat 3 136 0 2 1681 545 192 0 0 chrX 143663759 143663863 -22986433 + Lx2 LINE L1 6244 6347 -653 2 1681 2282 50 20 3 chrX 143663894 143664193 -22986103 - L1_Mus2 LINE L1 -2 6564 6261 2 1681 3908 128 50 12 chrX 143664188 143664829 -22985467 + Lx2 LINE L1 6333 6997 0 2 1681 9356 80 29 26 chrX 143670217 143670402 -22979894 + L1_Mur1 LINE L1 3773 3959 -1927 2 1681 2773 138 42 27 chrX 143670402 143670877 -22979419 - RLTR45 LTR ERVK 0 482 1 2 1681 9356 80 29 26 chrX 143670877 143671845 -22978451 + L1_Mur1 LINE L1 3960 4937 -949 2 1681 2368 124 148 35 chrX 143671845 143672278 -22978018 + RLTR45 LTR ERVK 1 482 0 2 1681 9356 80 29 26 chrX 143672278 143672503 -22977793 + L1_Mur1 LINE L1 4938 5156 -730 2 1681 457 227 125 8 chrX 143672638 143672758 -22977538 + B1F SINE Alu 13 146 -3 2 1681 226 358 45 0 chrX 143673334 143673401 -22976895 + ID4 SINE ID 4 73 -10 2 1681 221 259 37 0 chrX 143674047 143674101 -22976195 + C-rich Low_complexity Low_complexity 2 57 0 2 1681 270 184 38 28 chrX 143674934 143675040 -22975256 + (TTATA)n Simple_repeat Simple_repeat 4 110 0 2 1681 314 281 41 54 chrX 143675040 143675076 -22975220 + L1MA4 LINE L1 5774 5813 -487 2 1681 458 17 17 0 chrX 143675076 143675135 -22975161 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 2 1681 314 287 38 59 chrX 143675135 143675349 -22974947 + L1MA4 LINE L1 5814 6031 -272 2 1681 225 232 108 12 chrX 143675353 143675436 -22974860 - L1MD3 LINE L1 -1307 6688 6598 2 1681 29 60 0 0 chrX 143675436 143675486 -22974810 + AT_rich Low_complexity Low_complexity 1 50 0 2 1681 725 127 23 16 chrX 143675825 143675953 -22974343 - BC1_Mm scRNA scRNA -23 129 1 2 1681 5540 64 9 4 chrX 143676394 143677129 -22973167 + RLTR13D1 LTR ERVK 68 806 0 2 1681 967 97 37 0 chrX 143677129 143677263 -22973033 + L1_Mm LINE L1 5529 5667 -216 2 1681 651 277 14 89 chrX 143677469 143677683 -22972613 - B3A SINE B2 0 198 1 2 1681 832 207 76 25 chrX 143677708 143677906 -22972390 - B3 SINE B2 -6 210 3 2 1681 267 303 11 33 chrX 143678299 143678391 -22971905 - PB1D10 SINE Alu -2 115 26 2 1681 311 272 37 12 chrX 143678726 143678808 -22971488 + PB1 SINE Alu 42 125 -2 2 1681 5804 214 57 23 chrX 143678972 143680255 -22970041 + Lx6 LINE L1 5879 7205 -255 2 1681 209 340 29 20 chrX 143680493 143680595 -22969701 - MER5B DNA MER1_type -33 145 43 2 1681 391 311 74 0 chrX 143681293 143681415 -22968881 + RSINE1 SINE B4 4 134 -31 2 1681 226 167 20 20 chrX 143681435 143681484 -22968812 + (CAGA)n Simple_repeat Simple_repeat 4 52 0 2 1681 185 119 24 0 chrX 143681586 143681628 -22968668 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 2 1681 636 129 250 0 chrX 143681629 143681745 -22968551 - B1_Mur4 SINE Alu -1 149 5 2 1681 2293 136 98 11 chrX 143682003 143682382 -22967914 + Lx LINE L1 6231 6642 -12 2 1681 252 333 13 0 chrX 143682455 143682528 -22967768 - RCHARR1 DNA MER1_type 0 974 901 2 1681 509 301 64 39 chrX 143682528 143682732 -22967564 - ORR1D2 LTR MaLR 0 370 162 2 1681 554 244 0 8 chrX 143682720 143682848 -22967448 - RCHARR1 DNA MER1_type -523 451 325 2 1681 1076 167 156 0 chrX 143682862 143683054 -22967242 + URR1A DNA MER1_type 5 226 0 2 1681 402 21 0 0 chrX 143683104 143683151 -22967145 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 1681 362 143 0 0 chrX 143683272 143683328 -22966968 + URR1A DNA MER1_type 168 223 -3 2 1681 470 298 127 75 chrX 143683336 143683604 -22966692 - RCHARR1 DNA MER1_type -658 316 35 2 1681 328 331 41 21 chrX 143684213 143684358 -22965938 - B1_Mur3 SINE Alu -1 148 1 2 1681 235 151 41 0 chrX 143685085 143685158 -22965138 + (TCTCTG)n Simple_repeat Simple_repeat 2 77 0 2 1681 22 35 0 0 chrX 143685226 143685255 -22965041 + AT_rich Low_complexity Low_complexity 1 29 0 2 1681 258 206 96 19 chrX 143685255 143685359 -22964937 - Lx5 LINE L1 -2 7048 6937 2 1681 269 294 126 63 chrX 143685365 143685492 -22964804 - B4A SINE B4 -76 216 81 2 1681 298 91 18 18 chrX 143685508 143685564 -22964732 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1681 228 260 83 75 chrX 143686875 143687008 -22963288 + L1MC3 LINE L1 7651 7784 -1 2 1681 22 0 0 0 chrX 143687225 143687247 -22963049 + AT_rich Low_complexity Low_complexity 1 22 0 2 1681 21 36 0 0 chrX 143687287 143687315 -22962981 + AT_rich Low_complexity Low_complexity 1 28 0 2 1681 24395 122 79 5 chrX 143687328 143688167 -22962129 + L1_Mus1 LINE L1 1648 2530 -3353 2 1681 2946 118 8 5 chrX 143688167 143688569 -22961727 + RLTR9D LTR ERVK 1 403 0 2 1681 24395 113 67 4 chrX 143688569 143691897 -22958399 + L1_Mus1 LINE L1 2531 6109 -458 2 1681 331 317 116 6 chrX 143692608 143692789 -22957507 + MER2 DNA MER2_type 26 226 -119 2 1681 246 304 0 11 chrX 143694585 143694678 -22955618 - MurSAT1 Satellite Satellite -24 96 5 2 1681 329 310 5 5 chrX 143695982 143696128 -22954168 - MurSAT1 Satellite Satellite -2 146 1 2 1681 246 246 27 14 chrX 143696522 143696596 -22953700 - MurSAT1 Satellite Satellite -10 110 36 2 1681 257 326 10 10 chrX 143696671 143696767 -22953529 - MurSAT1 Satellite Satellite -10 110 15 3 1681 395 312 13 9 chrX 143697051 143697225 -22953071 - MurSAT1 Satellite Satellite -4 174 1 3 1681 393 303 0 0 chrX 143697397 143697519 -22952777 - MurSAT1 Satellite Satellite -21 122 1 3 1681 375 311 13 9 chrX 143697786 143697963 -22952333 - MurSAT1 Satellite Satellite -1 177 1 3 1681 418 314 0 0 chrX 143698089 143698239 -22952057 - MurSAT1 Satellite Satellite 0 150 1 3 1681 240 272 130 0 chrX 143698606 143698698 -22951598 - MurSAT1 Satellite Satellite -1 119 16 3 1681 292 339 0 0 chrX 143698836 143698948 -22951348 - MurSAT1 Satellite Satellite -3 117 6 2 1681 340 334 5 16 chrX 143698977 143699105 -22951191 - MurSAT1 Satellite Satellite -54 126 1 2 1681 433 273 0 0 chrX 143699920 143700037 -22950259 - MurSAT1 Satellite Satellite -19 117 1 3 1681 242 345 16 72 chrX 143700408 143700533 -22949763 - MurSAT1 Satellite Satellite -1 119 2 3 1681 309 268 29 24 chrX 143700686 143700834 -22949462 - MurSAT1 Satellite Satellite -23 148 1 3 1681 229 369 0 0 chrX 143701049 143701160 -22949136 - MurSAT1 Satellite Satellite -2 118 8 3 1681 346 301 15 0 chrX 143701194 143701369 -22948927 - MurSAT1 Satellite Satellite -27 177 1 3 1681 235 364 0 71 chrX 143701555 143701682 -22948614 - MurSAT1 Satellite Satellite -1 119 2 3 1681 299 287 29 29 chrX 143701835 143701983 -22948313 - MurSAT1 Satellite Satellite -23 148 1 3 1681 365 319 13 0 chrX 143702361 143702536 -22947760 - MurSAT1 Satellite Satellite -2 177 1 3 1681 349 276 30 26 chrX 143702891 143703085 -22947211 - MurSAT1 Satellite Satellite -16 194 1 3 1681 321 291 19 0 chrX 143703428 143703531 -22946765 - MurSAT1 Satellite Satellite -3 117 13 3 1681 339 325 18 15 chrX 143703797 143703964 -22946332 - MurSAT1 Satellite Satellite -39 167 1 3 1681 366 294 37 21 chrX 143704060 143704265 -22946031 - MurSAT1 Satellite Satellite -1 208 1 3 1681 268 318 20 15 chrX 143704525 143704648 -22945648 - MurSAT1 Satellite Satellite -11 123 1 3 1681 3233 48 0 0 chrX 143706241 143706598 -22943698 + IAPEY2_LTR LTR ERVK 1 357 0 3 1681 1145 125 0 6 chrX 143707886 143708055 -22942241 + B2_Mm2 SINE B2 1 168 -27 3 1681 206 95 0 23 chrX 143708861 143708904 -22941392 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 3 1681 30335 20 0 0 chrX 143709638 143713107 -22937189 + L1Md_T LINE L1 2119 5586 -297 3 1681 8854 38 1 0 chrX 143713107 143714101 -22936195 + L1Md_T LINE L1 5587 6581 -1 3 1681 651 88 0 0 chrX 143718351 143718442 -22931854 + (TTCC)n Simple_repeat Simple_repeat 3 93 0 3 1681 1141 129 17 11 chrX 143718442 143718622 -22931674 - B2_Mm2 SINE B2 -14 181 1 3 1681 1008 232 13 23 chrX 143718857 143719157 -22931139 + L1VL1 LINE L1 1 297 -6125 3 1681 5899 89 44 63 chrX 143719155 143720744 -22929552 + L1Md_F LINE L1 190 1679 -4204 3 1681 2337 67 7 0 chrX 143720746 143721046 -22929250 - L1_Mm LINE L1 -1527 4356 4055 3 1681 4561 58 0 12 chrX 143721038 143721597 -22928699 + L1Md_F2 LINE L1 5029 5586 -297 3 1681 8722 42 1 3 chrX 143721597 143722595 -22927701 + L1Md_F2 LINE L1 5587 6582 0 3 1681 2131 40 0 25 chrX 143722595 143722615 -22927681 + L1_Mm LINE L1 5587 5601 -282 3 1681 35581 23 2 7 chrX 143722727 143727993 -22922303 + L1Md_T LINE L1 353 5585 -298 3 1681 8329 38 3 0 chrX 143727994 143728986 -22921310 + L1Md_T LINE L1 5587 6581 -1 3 1681 1060 60 107 0 chrX 143728997 143729146 -22921150 + L1Md_F2 LINE L1 5422 5586 -297 3 1681 7606 59 8 4 chrX 143729146 143730119 -22920177 + L1Md_F2 LINE L1 5587 6563 -19 3 1681 570 15 0 0 chrX 143730123 143730190 -22920106 + (GA)n Simple_repeat Simple_repeat 2 68 0 3 1681 203 186 23 0 chrX 143733818 143733861 -22916435 + (TTG)n Simple_repeat Simple_repeat 2 45 0 3 1681 402 21 0 0 chrX 143734496 143734543 -22915753 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1681 207 152 0 0 chrX 143734615 143734661 -22915635 + (TATG)n Simple_repeat Simple_repeat 3 48 0 3 1681 209 182 0 18 chrX 143734665 143734721 -22915575 + CT-rich Low_complexity Low_complexity 2 56 0 3 1681 631 230 80 33 chrX 143734742 143734942 -22915354 + ORR1B2 LTR MaLR 1 204 -190 3 1681 2311 213 60 43 chrX 143734995 143735643 -22914653 - RLTR21 LTR ERVK -368 1204 546 3 1681 270 0 0 0 chrX 143735649 143735679 -22914617 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1681 372 197 0 0 chrX 143735696 143735762 -22914534 - RLTR21 LTR ERVK -1248 324 259 3 1681 36741 6 0 0 chrX 143735766 143741119 -22909177 + L1Md_A LINE L1 232 5586 -297 3 1681 9029 4 0 0 chrX 143741119 143742115 -22908181 + L1Md_A LINE L1 5587 6582 0 3 1681 892 229 21 161 chrX 143742133 143742424 -22907872 - RLTR21 LTR ERVK -1322 250 1 3 1681 1566 269 54 5 chrX 143742794 143743242 -22907054 - Lx6 LINE L1 0 7460 6991 3 1681 4847 231 29 26 chrX 143743237 143744137 -22906159 - Lx6 LINE L1 -645 6815 5904 3 1681 1712 229 34 12 chrX 143744137 143744549 -22905747 - MTC LTR MaLR 0 421 1 3 1681 4847 212 2 20 chrX 143744549 143744923 -22905373 - Lx6 LINE L1 -1557 5903 5535 3 1681 628 165 91 29 chrX 143745096 143745243 -22905053 - L1_Mur3 LINE L1 -2703 3177 3018 3 1681 3248 31 0 0 chrX 143745243 143745624 -22904672 - L1Md_F2 LINE L1 -12 6570 6190 3 1681 628 165 91 29 chrX 143745624 143745651 -22904645 - L1_Mur3 LINE L1 -2863 3017 2993 3 1681 566 333 58 12 chrX 143745661 143745834 -22904462 - ID_B1 SINE B4 -41 183 3 3 1681 231 292 14 0 chrX 143745969 143746041 -22904255 + (TATG)n Simple_repeat Simple_repeat 2 74 0 3 1681 654 85 0 0 chrX 143746757 143746851 -22903445 + (GA)n Simple_repeat Simple_repeat 1 94 0 3 1681 884 207 46 17 chrX 143747572 143747813 -22902483 - L1_Rod LINE L1 -1801 4046 3799 3 1681 2264 119 12 0 chrX 143747952 143748288 -22902008 - Lx3_Mus LINE L1 0 7009 6670 3 1681 611 253 80 56 chrX 143748301 143748705 -22901591 - Lx8 LINE L1 -1715 5758 5304 3 1681 312 174 81 0 chrX 143748762 143748848 -22901448 - Lx9 LINE L1 -8 7636 7544 3 1681 272 161 0 31 chrX 143748901 143748965 -22901331 - Lx8 LINE L1 -635 5212 5151 3 1681 308 360 18 9 chrX 143748967 143749079 -22901217 + L1ME3A LINE L1 5886 5998 -175 3 1681 27222 138 27 14 chrX 143749182 143753307 -22896989 + L1_Mus3 LINE L1 206 4398 -1485 3 1681 3912 85 2 6 chrX 143753307 143753828 -22896468 + L1_Mus1 LINE L1 6048 6566 -1 3 1681 1110 82 7 0 chrX 143753834 143753980 -22896316 + B1_Mus2 SINE Alu 1 147 0 3 1681 27222 127 10 7 chrX 143753980 143754667 -22895629 + L1_Mus3 LINE L1 4406 5085 -798 3 1681 4835 69 11 0 chrX 143754667 143755291 -22895005 + L1_Mus1 LINE L1 5937 6567 0 3 1681 27222 116 13 2 chrX 143755291 143756837 -22893459 + L1_Mus3 LINE L1 5086 6638 0 3 1681 684 271 13 0 chrX 143756950 143757105 -22893191 - RSINE1 SINE B4 0 165 9 3 1681 1387 337 78 43 chrX 143757127 143757732 -22892564 - MER73 LTR ERVL -18 626 1 3 1681 305 248 139 21 chrX 143757742 143757886 -22892410 - L1M4b LINE L1 -5597 1737 1577 3 1681 444 319 29 91 chrX 143757970 143758180 -22892116 + B3A SINE B2 1 197 -1 3 1681 401 341 44 15 chrX 143758223 143758360 -22891936 + B1F2 SINE Alu 1 141 -8 3 1681 329 253 27 0 chrX 143758391 143758466 -22891830 - B3A SINE B2 -120 78 2 3 1681 305 70 0 0 chrX 143758541 143758584 -22891712 - L1_Mur2 LINE L1 -773 5104 5062 3 1681 1034 187 70 122 chrX 143758582 143758911 -22891385 + Lx LINE L1 5799 6110 -866 3 1681 2093 139 20 41 chrX 143758911 143759302 -22890994 + Lx LINE L1 6271 6653 -1 3 1681 23 0 0 0 chrX 143760108 143760131 -22890165 + AT_rich Low_complexity Low_complexity 1 23 0 3 1681 22 56 0 0 chrX 143760314 143760350 -22889946 + AT_rich Low_complexity Low_complexity 1 36 0 3 1681 216 324 0 14 chrX 143760439 143760508 -22889788 + GA-rich Low_complexity Low_complexity 3 70 0 3 1681 239 0 32 0 chrX 143761806 143761837 -22888459 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1681 234 191 0 0 chrX 143763526 143763573 -22886723 + T-rich Low_complexity Low_complexity 1 47 0 3 1681 259 282 153 0 chrX 143763576 143763596 -22886700 - PB1D10 SINE Alu -8 109 12 3 1681 280 191 31 31 chrX 143763596 143763661 -22886635 - ID_B1 SINE B4 -67 157 93 3 1681 192 402 41 30 chrX 143764015 143764184 -22886112 - MIR SINE MIR -89 173 3 3 1681 7200 73 17 11 chrX 143764795 143766246 -22884050 - L1_Mus1 LINE L1 0 6567 5110 3 1681 823 169 90 0 chrX 143766247 143766436 -22883860 + L1_Mur1 LINE L1 4862 5067 -819 3 1681 405 136 0 0 chrX 143766470 143766536 -22883760 + (GGGA)n Simple_repeat Simple_repeat 4 69 0 3 1681 211 271 102 0 chrX 143766875 143766934 -22883362 + ID4 SINE ID 5 69 -14 3 1681 268 180 0 0 chrX 143767072 143767122 -22883174 - PB1 SINE Alu -3 124 75 3 1681 26 0 0 0 chrX 143767162 143767188 -22883108 + AT_rich Low_complexity Low_complexity 1 26 0 3 1681 215 275 203 15 chrX 143767365 143767498 -22882798 - MIRb SINE MIR 0 268 111 3 1681 1145 75 0 0 chrX 143767639 143767774 -22882522 + B1_Mm SINE Alu 1 135 -12 3 1681 633 27 0 0 chrX 143767774 143767849 -22882447 + (GA)n Simple_repeat Simple_repeat 2 76 0 3 1681 1145 75 0 0 chrX 143767849 143767860 -22882436 + B1_Mm SINE Alu 136 146 -1 3 1681 261 338 147 60 chrX 143768202 143768280 -22882016 - MLT1A0 LTR MaLR -2 363 288 3 1681 3080 144 17 13 chrX 143768280 143768806 -22881490 - RLTR11A LTR ERVK 0 528 1 3 1681 261 338 147 60 chrX 143768806 143769061 -22881235 - MLT1A0 LTR MaLR -78 287 3 3 1681 238 350 0 118 chrX 143769230 143769340 -22880956 + B4A SINE B4 49 145 -147 3 1681 384 208 0 3 chrX 143770127 143770201 -22880095 - B1_Mus1 SINE Alu -40 77 5 3 1681 182 371 82 23 chrX 143770536 143770707 -22879589 + MIR SINE MIR 65 245 -17 3 1681 214 310 41 27 chrX 143771609 143771682 -22878614 - ID4_ SINE ID -9 74 1 3 1681 255 412 31 6 chrX 143772021 143772182 -22878114 + ORR1E LTR MaLR 1 165 -194 3 1681 25 51 0 0 chrX 143772449 143772488 -22877808 + AT_rich Low_complexity Low_complexity 1 39 0 3 1681 2522 324 131 52 chrX 143772592 143772965 -22877331 + MTE-int LTR MaLR 1 383 -1197 3 1681 3206 133 33 4 chrX 143772965 143773487 -22876809 - Lx3C LINE L1 -2 6974 6438 3 1681 2522 324 131 52 chrX 143773487 143773614 -22876682 + MTE-int LTR MaLR 384 500 -1080 3 1681 3434 77 4 24 chrX 143773614 143774107 -22876189 - L1_Mus3 LINE L1 0 6638 6156 3 1681 2522 324 131 52 chrX 143774107 143774273 -22876023 + MTE-int LTR MaLR 501 636 -944 3 1681 2763 45 119 0 chrX 143774273 143774627 -22875669 + MTA_Mm LTR MaLR 1 396 0 3 1681 2522 324 131 52 chrX 143774627 143775212 -22875084 + MTE-int LTR MaLR 637 1348 -232 3 1681 1023 128 0 0 chrX 143775212 143775376 -22874920 + (TTCTCC)n Simple_repeat Simple_repeat 3 166 0 3 1681 2522 324 131 52 chrX 143775376 143775492 -22874804 + MTE-int LTR MaLR 1349 1476 -104 3 1681 861 309 14 7 chrX 143775592 143775879 -22874417 + B4A SINE B4 2 290 -2 3 1681 1758 256 60 48 chrX 143775912 143776095 -22874201 + L1MA6 LINE L1 5426 5598 -702 3 1681 189 0 0 0 chrX 143776095 143776116 -22874180 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 3 1681 1758 256 60 48 chrX 143776116 143776676 -22873620 + L1MA6 LINE L1 5599 6177 -123 3 1681 361 306 44 22 chrX 143776808 143776945 -22873351 + B1F2 SINE Alu 1 140 -9 3 1681 23 33 0 0 chrX 143776966 143776996 -22873300 + AT_rich Low_complexity Low_complexity 1 30 0 3 1681 933 335 121 21 chrX 143777022 143777494 -22872802 - LTR53 LTR ERVL 0 519 1 3 1681 301 342 0 0 chrX 143777844 143777917 -22872379 + RSINE1 SINE B4 3 75 -90 4 1681 216 97 0 0 chrX 143777966 143777997 -22872299 + (CATG)n Simple_repeat Simple_repeat 4 34 0 4 1681 333 0 0 0 chrX 143777997 143778034 -22872262 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1681 25 75 0 0 chrX 143778265 143778318 -22871978 + AT_rich Low_complexity Low_complexity 1 53 0 4 1681 291 301 41 0 chrX 143778610 143778683 -22871613 - RSINE1 SINE B4 -6 159 84 4 1681 17832 67 8 2 chrX 143778697 143780019 -22870277 - L1Md_F2 LINE L1 -3 6579 5249 4 1681 297 0 0 0 chrX 143780019 143780052 -22870244 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 1681 468 0 0 0 chrX 143780052 143780104 -22870192 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 1681 17832 74 7 1 chrX 143780104 143781850 -22868446 - L1Md_F2 LINE L1 -635 5248 3492 4 1681 231 316 48 95 chrX 143782042 143782090 -22868206 - MLT1A0 LTR MaLR -262 103 56 4 1681 857 214 50 189 chrX 143782090 143782262 -22868034 - ORR1C2 LTR MaLR 0 384 235 4 1681 360 0 0 0 chrX 143782262 143782302 -22867994 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1681 857 214 50 189 chrX 143782302 143782573 -22867723 - ORR1C2 LTR MaLR -150 234 3 4 1681 231 316 48 95 chrX 143782573 143782629 -22867667 - MLT1A0 LTR MaLR -310 55 4 4 1681 22 0 0 0 chrX 143782688 143782710 -22867586 + AT_rich Low_complexity Low_complexity 1 22 0 4 1681 341 265 0 54 chrX 143782857 143782962 -22867334 - B1F1 SINE Alu -9 108 13 4 1681 30 27 0 0 chrX 143783144 143783181 -22867115 + AT_rich Low_complexity Low_complexity 1 37 0 4 1681 278 235 61 0 chrX 143783361 143783459 -22866837 + L1MB5 LINE L1 38 141 -6401 4 1681 385 352 25 53 chrX 143783533 143783815 -22866481 + L1MB5 LINE L1 254 527 -6015 4 1681 729 288 144 49 chrX 143783890 143784528 -22865768 + L1MB5 LINE L1 712 1410 -5132 4 1681 314 278 205 71 chrX 143784532 143784981 -22865315 + L1MB5 LINE L1 5197 5705 -939 4 1681 978 305 64 50 chrX 143785069 143785946 -22864350 + L1MB5 LINE L1 5762 6632 -44 4 1682 2128 86 112 14 chrX 143786001 143786366 -22863930 - Lx3_Mus LINE L1 -1 7008 6608 4 1682 4803 80 20 31 chrX 143786362 143787070 -22863226 - Lx3_Mus LINE L1 -514 6495 5796 4 1682 291 337 23 0 chrX 143787071 143787157 -22863139 - B3 SINE B2 -41 175 88 4 1682 3575 74 4 4 chrX 143787170 143787657 -22862639 - RLTR1C LTR ERV1 -16 487 1 4 1682 449 220 0 71 chrX 143787657 143787755 -22862541 - B3 SINE B2 -123 93 3 4 1682 21 89 0 0 chrX 143787775 143787831 -22862465 + AT_rich Low_complexity Low_complexity 1 56 0 4 1682 861 255 5 20 chrX 143788195 143788395 -22861901 + B3 SINE B2 8 204 -12 4 1682 321 297 46 40 chrX 143788420 143788571 -22861725 + L1M5 LINE L1 3752 3903 -2243 4 1682 1123 189 118 0 chrX 143788599 143788895 -22861401 + Lx9 LINE L1 7280 7610 -34 4 1682 840 48 0 0 chrX 143788906 143789011 -22861285 + (CATATA)n Simple_repeat Simple_repeat 2 106 0 4 1682 24 0 0 0 chrX 143789591 143789615 -22860681 + AT_rich Low_complexity Low_complexity 1 24 0 4 1682 661 266 83 17 chrX 143789637 143789817 -22860479 + B3 SINE B2 1 192 -24 4 1682 974 287 74 33 chrX 143789831 143790198 -22860098 + Lx9 LINE L1 5594 5975 -1669 4 1682 2151 176 45 8 chrX 143790355 143790756 -22859540 + MTC LTR MaLR 1 416 -5 4 1682 1900 268 44 19 chrX 143790874 143791182 -22859114 + Lx9 LINE L1 6379 6691 -953 4 1682 4676 132 32 1 chrX 143791182 143791897 -22858399 + RMER19A LTR ERVK 1 737 0 4 1682 1900 262 133 47 chrX 143791897 143792416 -22857880 + Lx9 LINE L1 6692 7259 -385 4 1682 5043 154 55 7 chrX 143792424 143793383 -22856913 + Lx2B LINE L1 5994 6998 -2 4 1682 575 221 122 52 chrX 143793387 143793673 -22856623 + Lx9 LINE L1 7334 7639 -5 4 1682 28 48 0 0 chrX 143793777 143793819 -22856477 + AT_rich Low_complexity Low_complexity 1 42 0 4 1682 465 161 0 0 chrX 143793947 143794034 -22856262 + (TA)n Simple_repeat Simple_repeat 2 88 0 4 1682 244 293 42 21 chrX 143794050 143794193 -22856103 + L1M5 LINE L1 4549 4694 -1452 4 1682 1426 249 108 28 chrX 143794393 143794782 -22855514 + Lx5 LINE L1 6614 7033 -17 4 1682 1667 310 59 80 chrX 143795028 143795213 -22855083 + Lx8 LINE L1 6387 6585 -888 4 1682 1268 115 73 14 chrX 143795213 143795317 -22854979 + Lx LINE L1 6415 6518 -136 4 1682 189 0 0 0 chrX 143795317 143795338 -22854958 + (TGGG)n Simple_repeat Simple_repeat 1 21 0 4 1682 1268 115 73 14 chrX 143795338 143795453 -22854843 + Lx LINE L1 6519 6646 -8 4 1682 1667 310 59 80 chrX 143795453 143796347 -22853949 + Lx8 LINE L1 6586 7444 -29 4 1682 279 133 0 0 chrX 143796597 143796642 -22853654 + (T)n Simple_repeat Simple_repeat 1 45 0 4 1682 297 233 0 27 chrX 143797100 143797175 -22853121 + ID4_ SINE ID 2 74 -9 4 1682 180 77 0 0 chrX 143797179 143797205 -22853091 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 4 1682 258 32 0 0 chrX 143798209 143798240 -22852056 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1682 1715 315 104 35 chrX 143799208 143800142 -22850154 + Lx8 LINE L1 6475 7472 -1 4 1682 6098 235 63 20 chrX 143800163 143800593 -22849703 + Lx7 LINE L1 6059 6510 -1186 4 1682 5537 67 0 1 chrX 143800593 143801301 -22848995 + L1_Mus1 LINE L1 5861 6567 0 4 1682 6098 235 63 20 chrX 143801301 143802127 -22848169 + Lx7 LINE L1 6511 7357 -339 4 1682 3352 108 10 14 chrX 143802127 143802624 -22847672 + Lx LINE L1 6151 6645 -9 4 1682 306 0 0 0 chrX 143802629 143802663 -22847633 + (TAAAA)n Simple_repeat Simple_repeat 4 37 0 4 1682 6098 235 63 20 chrX 143802663 143802970 -22847326 + Lx7 LINE L1 7360 7695 -1 4 1682 8089 151 42 8 chrX 143803006 143804450 -22845846 + Lx5 LINE L1 4384 5877 0 4 1682 387 0 0 0 chrX 143804497 143804540 -22845756 + (TTA)n Simple_repeat Simple_repeat 3 45 0 4 1682 2193 113 24 3 chrX 143804544 143804880 -22845416 - Lx3B LINE L1 -3 6970 6628 4 1682 5383 213 21 14 chrX 143804880 143805292 -22845004 + Lx5 LINE L1 5875 6298 -752 4 1682 2096 123 3 13 chrX 143805292 143805606 -22844690 + RLTR10E LTR ERVK 1 311 0 4 1682 5383 213 21 14 chrX 143805606 143806358 -22843938 + Lx5 LINE L1 6299 7048 -2 4 1682 228 256 37 0 chrX 143806384 143806466 -22843830 + Lx4B LINE L1 6970 7054 -4 4 1682 835 167 11 11 chrX 143807072 143807248 -22843048 + GA-rich Low_complexity Low_complexity 3 178 0 4 1682 350 322 110 44 chrX 143807248 143807612 -22842684 + L1MC4 LINE L1 957 1344 -4871 4 1682 259 149 75 0 chrX 143807697 143807764 -22842532 - Lx6 LINE L1 0 7460 7389 4 1682 743 221 24 42 chrX 143808078 143808291 -22842005 - Lx7 LINE L1 -1 7695 7487 4 1682 768 258 10 10 chrX 143808488 143808508 -22841788 - Lx5 LINE L1 -1449 6011 5992 4 1682 643 130 17 0 chrX 143808508 143808623 -22841673 - Lx7 LINE L1 0 7696 7580 4 1682 1028 152 17 3 chrX 143808623 143808821 -22841475 - Lx5 LINE L1 -1469 5991 5794 4 1682 4860 220 53 10 chrX 143808811 143809822 -22840474 + Lx5 LINE L1 5985 7039 -11 4 1682 324 349 19 32 chrX 143809875 143810029 -22840267 + HAL1b LINE L1 1309 1460 -549 4 1682 22 0 0 0 chrX 143810169 143810191 -22840105 + AT_rich Low_complexity Low_complexity 1 22 0 4 1682 4570 107 37 3 chrX 143810210 143810893 -22839403 - L1_Mus1 LINE L1 -1 6566 5861 4 1682 207 0 0 0 chrX 143810898 143810921 -22839375 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 4 1682 10221 70 3 1 chrX 143810926 143812941 -22837355 - L1Md_F2 LINE L1 -12 6570 4551 4 1682 24 0 0 0 chrX 143812951 143812975 -22837321 + AT_rich Low_complexity Low_complexity 1 24 0 4 1682 1104 278 61 30 chrX 143813018 143813411 -22836885 - MTD LTR MaLR -3 416 12 4 1682 401 235 81 32 chrX 143813526 143813649 -22836647 + L1MC LINE L1 5496 5624 -720 4 1682 180 0 0 0 chrX 143813660 143813680 -22836616 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1682 329 228 0 0 chrX 143813729 143813830 -22836466 + L1MC3 LINE L1 6926 7026 -759 4 1682 480 325 46 76 chrX 143813834 143814208 -22836088 + ORR1E LTR MaLR 1 365 -19 4 1682 469 389 113 26 chrX 143814283 143815061 -22835235 - L1M4b LINE L1 -6479 855 10 4 1682 1150 279 91 68 chrX 143815139 143815565 -22834731 + Lx6 LINE L1 6063 6745 -715 4 1682 378 0 0 0 chrX 143815565 143815607 -22834689 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1682 1893 278 50 26 chrX 143815607 143816222 -22834074 + Lx6 LINE L1 6448 7433 -27 4 1682 275 346 17 119 chrX 143816694 143816742 -22833554 + RSINE1 SINE B4 60 109 -56 4 1682 4706 64 0 0 chrX 143816742 143817333 -22832963 + L1_Mus1 LINE L1 5976 6566 -1 4 1682 564 42 0 0 chrX 143817343 143817414 -22832882 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 4 1682 275 346 17 119 chrX 143817414 143817472 -22832824 + RSINE1 SINE B4 110 165 0 4 1682 622 306 27 55 chrX 143818400 143818729 -22831567 + MTE2b LTR MaLR 6 300 -79 4 1682 221 309 0 0 chrX 143819643 143819698 -22830598 - ID4_ SINE ID -2 81 27 4 1682 366 318 31 8 chrX 143820141 143820271 -22830025 - Lx8 LINE L1 -146 7327 7195 4 1682 209 194 0 0 chrX 143820580 143820616 -22829680 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 1682 209 83 28 0 chrX 143820893 143820929 -22829367 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1682 349 292 21 28 chrX 143821519 143821660 -22828636 + MTE2a LTR MaLR 1 140 -279 4 1682 2321 183 30 25 chrX 143821665 143822193 -22828103 + RLTR31_Mm LTR ERVK 1 493 -91 4 1682 503 319 69 65 chrX 143822133 143822378 -22827918 + MTE2a LTR MaLR 134 379 0 4 1682 180 111 0 0 chrX 143823866 143823893 -22826403 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1682 645 106 0 0 chrX 143824559 143824672 -22825624 + (TC)n Simple_repeat Simple_repeat 1 113 0 4 1682 459 73 0 0 chrX 143824672 143824740 -22825556 + (TG)n Simple_repeat Simple_repeat 1 68 0 4 1682 809 182 29 0 chrX 143824765 143824902 -22825394 - B1_Mur4 SINE Alu -8 142 2 4 1682 439 309 30 0 chrX 143825654 143825855 -22824441 + Lx9 LINE L1 7421 7627 -17 4 1682 993 94 88 6 chrX 143826384 143826544 -22823752 + L1Md_F2 LINE L1 6400 6572 -10 4 1682 412 288 74 22 chrX 143826877 143827012 -22823284 - B1F SINE Alu -6 143 2 4 1682 244 324 28 47 chrX 143827261 143827368 -22822928 - MIR SINE MIR -60 148 44 4 1682 210 37 0 0 chrX 143829315 143829342 -22820954 + (TTG)n Simple_repeat Simple_repeat 2 28 0 4 1682 318 291 48 12 chrX 143830861 143831028 -22819268 + L1MB8 LINE L1 5741 5913 -265 4 1682 288 336 0 17 chrX 143831055 143831173 -22819123 + L1MB8 LINE L1 6021 6136 -48 4 1682 532 188 8 51 chrX 143831178 143831283 -22819013 + B1_Mur4 SINE Alu 37 139 -11 4 1682 392 0 21 0 chrX 143831283 143831331 -22818965 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 4 1682 532 188 8 51 chrX 143831331 143831343 -22818953 + B1_Mur4 SINE Alu 140 149 -1 4 1682 28 0 0 0 chrX 143832385 143832413 -22817883 + AT_rich Low_complexity Low_complexity 1 28 0 4 1682 440 304 79 49 chrX 143833420 143833686 -22816610 - Lx8 LINE L1 0 7473 7200 4 1682 4516 109 32 1 chrX 143833754 143834440 -22815856 + L1_Mus4 LINE L1 5927 6633 -3 4 1682 342 0 0 0 chrX 143834668 143834706 -22815590 + (TAA)n Simple_repeat Simple_repeat 1 38 0 4 1682 366 320 64 32 chrX 143834726 143834913 -22815383 - MIR SINE MIR -45 217 25 4 1682 297 0 0 0 chrX 143835184 143835217 -22815079 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1682 1040 196 19 19 chrX 143836185 143836393 -22813903 - URR1B DNA MER1_type 0 225 18 4 1682 216 0 0 0 chrX 143836682 143836706 -22813590 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1682 1141 58 0 0 chrX 143836706 143836844 -22813452 - B1_Mm SINE Alu -8 139 2 5 1682 264 369 59 12 chrX 143837036 143837206 -22813090 - MIR SINE MIR -14 248 71 5 1682 397 50 33 0 chrX 143838362 143838422 -22811874 + (TCC)n Simple_repeat Simple_repeat 1 62 0 5 1682 323 369 105 26 chrX 143838759 143839131 -22811165 - L2a LINE L2 -15 3411 2970 5 1682 396 0 0 0 chrX 143839167 143839211 -22811085 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1682 380 361 160 27 chrX 143839341 143839999 -22810297 - L2a LINE L2 -783 2636 1892 5 1682 405 280 65 77 chrX 143840010 143840165 -22810131 - MER21B LTR ERV1 -4 859 707 5 1682 1122 251 111 21 chrX 143840199 143840532 -22809764 - MER21B LTR ERV1 -285 578 216 5 1682 463 277 48 68 chrX 143841263 143841410 -22808886 + B4A SINE B4 2 145 -147 5 1682 267 314 0 19 chrX 143841728 143841832 -22808464 + (CATA)n Simple_repeat Simple_repeat 1 102 0 5 1682 571 305 0 8 chrX 143841971 143842103 -22808193 + RSINE1 SINE B4 14 144 -21 5 1682 528 16 0 0 chrX 143842111 143842172 -22808124 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 5 1682 219 349 23 11 chrX 143842178 143842265 -22808031 + B4A SINE B4 3 90 -202 5 1682 21 71 0 0 chrX 143842462 143842504 -22807792 + AT_rich Low_complexity Low_complexity 1 42 0 5 1682 189 0 0 0 chrX 143842612 143842633 -22807663 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 5 1682 182 257 0 0 chrX 143843011 143843046 -22807250 + L4 LINE RTE 596 630 -1399 5 1682 235 393 40 48 chrX 143844936 143845187 -22805109 - MIR SINE MIR -13 249 1 5 1682 6463 102 10 11 chrX 143846111 143847048 -22803248 + Lx2 LINE L1 5872 6807 -190 5 1682 195 139 0 0 chrX 143847681 143847717 -22802579 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 5 1682 7370 72 10 5 chrX 143848127 143849096 -22801200 + L1Md_F2 LINE L1 5600 6573 -9 5 1682 303 262 38 0 chrX 143851439 143851519 -22798777 + ID4_ SINE ID 1 83 0 5 1682 285 183 0 0 chrX 143851520 143851580 -22798716 + A-rich Low_complexity Low_complexity 1 60 0 5 1682 595 99 20 0 chrX 143851729 143851830 -22798466 + (GGAA)n Simple_repeat Simple_repeat 4 106 0 5 1682 311 126 0 0 chrX 143852308 143852362 -22797934 + PB1D9 SINE Alu 70 127 0 5 1682 252 291 0 0 chrX 143852421 143852476 -22797820 - B1F1 SINE Alu -93 56 2 5 1682 369 0 0 0 chrX 143853126 143853167 -22797129 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 5 1682 340 337 72 59 chrX 143853487 143853777 -22796519 - MER2 DNA MER2_type -35 310 17 5 1682 552 68 0 0 chrX 143853855 143853928 -22796368 + (GA)n Simple_repeat Simple_repeat 2 74 0 5 1682 520 75 43 11 chrX 143854666 143854760 -22795536 + L1Md_F2 LINE L1 6477 6573 -9 5 1682 796 257 19 38 chrX 143854931 143855141 -22795155 + B3 SINE B2 1 206 -10 5 1682 417 275 83 8 chrX 143855601 143855733 -22794563 + B1_Mur1 SINE Alu 1 142 -7 5 1682 258 260 0 0 chrX 143855736 143855809 -22794487 + A-rich Low_complexity Low_complexity 2 74 0 5 1682 931 115 11 22 chrX 143855813 143855991 -22794305 + (GAAAA)n Simple_repeat Simple_repeat 2 177 0 5 1682 355 290 152 5 chrX 143856371 143856442 -22793854 - Tigger7 DNA MER2_type -25 2466 2381 5 1682 468 0 0 0 chrX 143856442 143856494 -22793802 + (TA)n Simple_repeat Simple_repeat 1 52 0 5 1682 355 290 152 5 chrX 143856494 143856606 -22793690 - Tigger7 DNA MER2_type -111 2380 2257 5 1682 1290 104 0 25 chrX 143856622 143856819 -22793477 + B2_Mm2 SINE B2 2 193 -2 5 1682 679 322 15 5 chrX 143857180 143857380 -22792916 - ID_B1 SINE B4 -21 203 2 5 1682 2888 119 7 0 chrX 143858555 143858990 -22791306 + Lx LINE L1 6215 6652 -2 5 1682 2037 58 0 0 chrX 143859693 143859950 -22790346 + L1Md_T LINE L1 6326 6582 0 5 1682 1060 239 41 60 chrX 143859988 143860357 -22789939 - Lx7 LINE L1 -122 7574 7213 5 1682 435 337 56 28 chrX 143860357 143860399 -22789897 + L1MC4 LINE L1 973 1013 -5202 5 1682 1052 82 0 39 chrX 143860399 143860552 -22789744 + B1_Mus1 SINE Alu 2 148 0 5 1682 435 337 56 28 chrX 143860552 143860759 -22789537 + L1MC4 LINE L1 1014 1229 -4986 5 1682 335 343 99 35 chrX 143861026 143861168 -22789128 + ID_B1 SINE B4 1 151 -73 5 1682 1214 34 7 0 chrX 143861882 143862028 -22788268 - B1_Mus2 SINE Alu 0 147 1 5 1682 234 339 161 40 chrX 143863732 143863981 -22786315 - L3b LINE CR1 -92 390 112 5 1682 189 83 0 77 chrX 143864285 143864337 -22785959 + (CAAA)n Simple_repeat Simple_repeat 4 51 0 5 1682 947 54 8 0 chrX 143864936 143865066 -22785230 + (TG)n Simple_repeat Simple_repeat 2 132 0 5 1682 235 293 80 7 chrX 143865176 143865327 -22784969 - L1MA5 LINE L1 -6 6285 6124 5 1682 811 302 63 14 chrX 143865333 143865695 -22784601 - L1MA5 LINE L1 -462 5838 5459 5 1682 2293 166 37 10 chrX 143867636 143868044 -22782252 + MTC LTR MaLR 3 421 0 5 1682 484 264 100 76 chrX 143868407 143868657 -22781639 + RMER2 LTR ERV1 308 563 -4 5 1682 854 43 0 0 chrX 143868943 143869058 -22781238 - L1Md_T LINE L1 0 6582 6468 5 1682 219 109 0 42 chrX 143869059 143869107 -22781189 + (TTAA)n Simple_repeat Simple_repeat 3 48 0 5 1682 1430 53 0 0 chrX 143869327 143869516 -22780780 + L1_Mus2 LINE L1 6376 6564 -2 5 1682 676 368 30 8 chrX 143869665 143869901 -22780395 + B4A SINE B4 48 288 -4 5 1682 246 32 0 0 chrX 143869912 143869943 -22780353 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1682 2328 311 65 62 chrX 143870307 143870940 -22779356 - Lx9 LINE L1 -19 7625 7001 5 1682 2340 47 105 12 chrX 143870940 143871263 -22779033 - L1_Mus1 LINE L1 -1 6566 6214 5 1682 2328 311 65 62 chrX 143871263 143871893 -22778403 - Lx9 LINE L1 -644 7000 6358 5 1682 180 0 0 0 chrX 143871904 143871924 -22778372 + (TA)n Simple_repeat Simple_repeat 1 20 0 5 1682 23 68 0 0 chrX 143871929 143871973 -22778323 + AT_rich Low_complexity Low_complexity 1 44 0 5 1682 459 0 0 0 chrX 143872063 143872114 -22778182 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1682 259 363 82 11 chrX 143872257 143872441 -22777855 + MIRb SINE MIR 36 232 -36 5 1682 232 300 0 28 chrX 143872469 143872541 -22777755 + tRNA-Ala-GCY_ tRNA tRNA 1 70 -5 5 1682 226 384 51 29 chrX 143872548 143872685 -22777611 + B1F1 SINE Alu 5 144 -5 5 1682 295 335 85 23 chrX 143873716 143873893 -22776403 - RMER15 LTR ERVL -46 529 342 5 1682 576 162 0 0 chrX 143873927 143874032 -22776264 + (CA)n Simple_repeat Simple_repeat 1 105 0 5 1682 504 0 0 0 chrX 143874654 143874710 -22775586 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 1682 5737 17 0 0 chrX 143875271 143875933 -22774363 + L1Md_A LINE L1 4925 5586 -297 5 1682 8606 22 1 0 chrX 143875933 143876927 -22773369 + L1Md_A LINE L1 5587 6581 -1 5 1682 531 0 0 0 chrX 143877047 143877106 -22773190 + (A)n Simple_repeat Simple_repeat 1 59 0 5 1682 222 358 0 0 chrX 143877187 143877254 -22773042 + ID_B1 SINE B4 86 152 -72 5 1682 597 28 0 0 chrX 143877361 143877432 -22772864 + (TTCC)n Simple_repeat Simple_repeat 2 72 0 5 1682 641 246 47 26 chrX 143878848 143879040 -22771256 - Lx6 LINE L1 -4 7456 7261 5 1682 261 218 437 0 chrX 143879152 143879255 -22771041 - Lx7 LINE L1 -391 7305 7158 5 1682 668 225 175 6 chrX 143879252 143879435 -22770861 - Lx7 LINE L1 -1345 6351 6138 5 1682 932 166 17 17 chrX 143879419 143879597 -22770699 - L1_Mur3 LINE L1 -1074 4806 4629 5 1682 496 63 0 0 chrX 143879676 143879739 -22770557 + L1_Mus4 LINE L1 5838 5900 -736 5 1682 2674 109 32 28 chrX 143879992 143880424 -22769872 + Lx LINE L1 6215 6648 -6 5 1682 5261 179 38 7 chrX 143880424 143881511 -22768785 - L1_Mur3 LINE L1 -1287 4593 3474 5 1682 8097 44 4 5 chrX 143881551 143882640 -22767656 - L1Md_F2 LINE L1 0 6582 5495 5 1682 2572 169 23 39 chrX 143882642 143883167 -22767129 - L1_Mur3 LINE L1 -2407 3473 2960 5 1682 4380 46 0 16 chrX 143883167 143883716 -22766580 + L1Md_F2 LINE L1 6033 6572 -10 5 1682 405 0 0 0 chrX 143883716 143883761 -22766535 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 1682 2572 169 23 39 chrX 143883761 143883843 -22766453 - L1_Mur3 LINE L1 -2921 2959 2876 5 1682 15018 93 16 12 chrX 143883851 143887117 -22763179 - Lx3_Mus LINE L1 -8 7001 3716 5 1682 1504 115 0 100 chrX 143888411 143888622 -22761674 - Lx3_Mus LINE L1 -2156 3730 3536 5 1682 3486 80 0 6 chrX 143888622 143889004 -22761292 + L1_Mus1 LINE L1 6104 6484 -83 5 1682 3400 20 5 2 chrX 143889004 143889399 -22760897 + MTA_Mm LTR MaLR 1 396 0 5 1682 3486 80 0 6 chrX 143889399 143889483 -22760813 + L1_Mus1 LINE L1 6485 6567 0 5 1682 1504 115 0 100 chrX 143889483 143889561 -22760735 - Lx3_Mus LINE L1 -2351 3535 3470 5 1682 20598 140 29 4 chrX 143889614 143893979 -22756317 - L1_Mus4 LINE L1 -4 6632 2162 5 1682 274 122 0 0 chrX 143893968 143894009 -22756287 - L1_Mus4 LINE L1 -6268 716 676 5 1682 639 231 32 13 chrX 143894052 143894210 -22756086 - L1_Mus4 LINE L1 -6821 163 3 5 1682 433 133 61 0 chrX 143894212 143894310 -22755986 - L1_Mur3 LINE L1 -2986 2894 2791 5 1682 2140 167 23 27 chrX 143894321 143894795 -22755501 - L1_Mur3 LINE L1 -3360 2520 2049 5 1682 357 116 0 0 chrX 143894802 143894871 -22755425 + (TC)n Simple_repeat Simple_repeat 2 70 0 5 1682 4322 30 0 0 chrX 143896858 143897363 -22752933 - L1Md_T LINE L1 0 6582 6078 5 1682 4295 22 0 0 chrX 143897363 143897973 -22752323 + L1Md_A LINE L1 5480 6089 -493 5 1682 271 261 66 33 chrX 143898156 143898247 -22752049 + Lx9 LINE L1 4631 4730 -1150 5 1682 313 280 180 5 chrX 143898259 143898453 -22751843 - L1_Mur3 LINE L1 -1311 4569 4342 5 1682 329 256 172 29 chrX 143898473 143898682 -22751614 - L1_Mur3 LINE L1 -1726 4154 3916 5 1682 400 335 90 28 chrX 143898686 143898864 -22751432 - B3A SINE B2 0 216 28 5 1682 394 214 80 105 chrX 143898864 143899066 -22751230 - L1_Mur3 LINE L1 -598 5282 5056 5 1682 1137 245 40 33 chrX 143899081 143899381 -22750915 - Lx2B LINE L1 -11 6989 6688 5 1682 870 259 55 9 chrX 143899380 143899665 -22750631 - L1_Mur3 LINE L1 -795 5085 4810 5 1682 274 247 106 11 chrX 143899658 143899752 -22750544 + Lx9 LINE L1 5793 5895 -1749 5 1682 4868 209 60 30 chrX 143900447 143902428 -22747868 - Lx2 LINE L1 -1 6996 4941 5 1682 4936 144 5 8 chrX 143902426 143903260 -22747036 + Lx2 LINE L1 4104 4934 -949 5 1682 1167 41 21 0 chrX 143903685 143903830 -22746466 - B1_Mus1 SINE Alu 0 148 1 5 1682 311 53 0 0 chrX 143904297 143904335 -22745961 - tRNA-Lys-AAG tRNA tRNA -38 38 1 5 1682 494 229 53 148 chrX 143904642 143904811 -22745485 - RSINE1 SINE B4 -8 157 5 5 1682 35 0 0 0 chrX 143905900 143905935 -22744361 + AT_rich Low_complexity Low_complexity 1 35 0 5 1682 31 26 0 0 chrX 143907693 143907731 -22742565 + AT_rich Low_complexity Low_complexity 1 38 0 5 1682 690 241 153 11 chrX 143907822 143908011 -22742285 - B3 SINE B2 0 216 1 5 1682 1069 90 19 0 chrX 143908361 143908568 -22741728 - L1_Mus1 LINE L1 0 6567 6405 5 1682 2230 84 12 64 chrX 143909195 143909540 -22740756 + ORR1A2 LTR MaLR 1 327 0 5 1682 1014 255 166 13 chrX 143909621 143909923 -22740373 + Lx5 LINE L1 6689 7036 -14 5 1682 243 0 0 0 chrX 143909923 143909950 -22740346 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 5 1682 324 237 32 73 chrX 143909964 143910087 -22740209 + L1MB5 LINE L1 5868 5985 -189 5 1682 993 95 0 39 chrX 143910527 143910680 -22739616 + B1_Mus1 SINE Alu 1 147 -1 6 1682 276 30 0 0 chrX 143910685 143910718 -22739578 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 6 1682 7402 148 52 33 chrX 143910757 143910894 -22739402 + Lx LINE L1 4478 4614 -1269 6 1682 1002 67 52 15 chrX 143910894 143911030 -22739266 + B1_Mus1 SINE Alu 2 142 -6 6 1682 252 0 0 0 chrX 143911031 143911059 -22739237 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 1682 339 25 0 0 chrX 143911063 143911103 -22739193 + (GAAA)n Simple_repeat Simple_repeat 3 42 0 6 1682 7402 127 36 21 chrX 143911103 143913107 -22737189 + Lx LINE L1 4615 6647 -7 6 1682 2097 175 73 121 chrX 143913441 143914001 -22736295 + RMER16 LTR ERVK 1 533 0 6 1682 312 200 0 0 chrX 143914025 143914090 -22736206 + (TA)n Simple_repeat Simple_repeat 1 65 0 6 1682 720 217 202 17 chrX 143914099 143914277 -22736019 - B3 SINE B2 -4 212 2 6 1682 250 283 0 0 chrX 143914389 143914442 -22735854 + tRNA-Ala-GCA tRNA tRNA 3 55 -20 6 1682 21 57 0 0 chrX 143916407 143916442 -22733854 + AT_rich Low_complexity Low_complexity 1 35 0 6 1682 252 0 0 0 chrX 143916444 143916472 -22733824 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1682 387 0 0 0 chrX 143916472 143916514 -22733782 + (GA)n Simple_repeat Simple_repeat 1 43 0 6 1682 483 281 16 0 chrX 143916555 143916676 -22733620 - RSINE1 SINE B4 -39 126 4 6 210 5080 25 7 7 chrX 143916975 143917587 -22732709 + L1Md_F3 LINE L1 5973 6584 0 6 1683 22 35 0 0 chrX 143917726 143917755 -22732541 + AT_rich Low_complexity Low_complexity 1 29 0 6 1683 24 53 0 0 chrX 143919191 143919229 -22731067 + AT_rich Low_complexity Low_complexity 1 38 0 6 1683 184 352 57 0 chrX 143919488 143919576 -22730720 + MER5A DNA MER1_type 13 105 -84 6 1683 228 293 35 0 chrX 143919881 143919939 -22730357 - L2a LINE L2 -6 3420 3361 6 1683 817 329 24 8 chrX 143920416 143920670 -22729626 + B4A SINE B4 3 260 -32 6 1683 701 51 0 10 chrX 143920679 143920778 -22729518 + (TAGA)n Simple_repeat Simple_repeat 4 101 0 6 1683 294 330 110 0 chrX 143921001 143921110 -22729186 - MER58B DNA MER1_type -2 339 219 6 1683 281 24 0 47 chrX 143921277 143921320 -22728976 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 6 1683 525 68 0 0 chrX 143921320 143921394 -22728902 + (CA)n Simple_repeat Simple_repeat 1 74 0 6 1683 386 260 10 10 chrX 143921395 143921492 -22728804 + MER5B DNA MER1_type 82 178 0 6 1683 383 333 14 28 chrX 143922280 143922422 -22727874 + RSINE1 SINE B4 19 158 -7 6 1683 983 157 126 0 chrX 143923100 143923291 -22727005 + URR1A DNA MER1_type 2 216 -10 6 1683 240 269 29 29 chrX 143923446 143923515 -22726781 + ID4_ SINE ID 15 83 0 6 1683 262 306 161 32 chrX 143923589 143923775 -22726521 - MIR SINE MIR -2 260 51 6 1683 267 308 51 0 chrX 143924128 143924206 -22726090 - ID4_ SINE ID 0 83 2 6 1683 242 415 39 7 chrX 143924704 143924857 -22725439 + MIR SINE MIR 79 236 -26 6 1683 630 217 0 104 chrX 143925698 143925852 -22724444 + B1_Mur2 SINE Alu 7 144 -5 6 1683 347 282 82 0 chrX 143925979 143926089 -22724207 + PB1D7 SINE Alu 1 119 -1 6 1683 23 0 0 0 chrX 143926353 143926376 -22723920 + AT_rich Low_complexity Low_complexity 1 23 0 6 1683 21 0 0 0 chrX 143926495 143926516 -22723780 + AT_rich Low_complexity Low_complexity 1 21 0 6 1683 270 56 0 0 chrX 143926764 143926800 -22723496 + (TTGTG)n Simple_repeat Simple_repeat 2 37 0 6 1683 590 252 0 34 chrX 143926801 143926949 -22723347 - B1F SINE Alu 0 149 7 6 1683 657 258 0 94 chrX 143927171 143927351 -22722945 + RSINE1 SINE B4 3 165 0 6 1683 338 258 39 71 chrX 143927478 143927587 -22722709 + B3A SINE B2 95 201 -15 6 1683 305 272 48 88 chrX 143927647 143927772 -22722524 + PB1D7 SINE Alu 1 120 0 6 1683 21 0 0 0 chrX 143927823 143927844 -22722452 + AT_rich Low_complexity Low_complexity 1 21 0 6 1683 21 57 0 0 chrX 143927873 143927908 -22722388 + AT_rich Low_complexity Low_complexity 1 35 0 6 1683 254 351 30 8 chrX 143928186 143928318 -22721978 + L1MEc LINE L1 172 306 -6094 6 1683 180 0 0 0 chrX 143928580 143928600 -22721696 + (CA)n Simple_repeat Simple_repeat 2 21 0 6 1683 255 389 53 20 chrX 143928815 143929119 -22721177 - L2 LINE L2 -727 2692 2379 6 1683 222 331 8 16 chrX 143929153 143929282 -22721014 + (TA)n Simple_repeat Simple_repeat 2 129 0 6 1683 630 264 0 27 chrX 143930332 143930480 -22719816 + B3 SINE B2 1 144 -72 6 1683 398 94 0 15 chrX 143930505 143930570 -22719726 + (TAAA)n Simple_repeat Simple_repeat 4 67 0 6 1683 510 324 45 22 chrX 143930577 143930801 -22719495 + MIRb SINE MIR 33 261 -7 6 1683 33 85 0 0 chrX 143931969 143932051 -22718245 + AT_rich Low_complexity Low_complexity 1 82 0 6 1683 319 190 96 39 chrX 143933855 143933959 -22716337 - L1MB1 LINE L1 -21 6147 6038 6 1683 452 199 69 28 chrX 143935497 143935642 -22714654 + Lx9 LINE L1 7373 7523 -121 6 1683 378 226 34 25 chrX 143935678 143935796 -22714500 + Lx9 LINE L1 7518 7636 -8 6 1683 708 255 0 41 chrX 143936121 143936293 -22714003 - RSINE1 SINE B4 0 165 1 6 1683 270 253 85 32 chrX 143936366 143936460 -22713836 - PB1D10 SINE Alu -16 101 3 6 1683 465 275 90 90 chrX 143936470 143936658 -22713638 - B3A SINE B2 -7 191 4 6 1683 870 236 68 40 chrX 143936962 143937214 -22713082 + B4A SINE B4 14 272 -20 6 1683 206 81 0 26 chrX 143937219 143937257 -22713039 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1683 212 247 51 25 chrX 143937638 143937717 -22712579 + ID SINE ID 3 83 -141 6 1683 3469 87 2 0 chrX 143938133 143938605 -22711691 - L1_Mus1 LINE L1 -309 5574 5102 6 1683 7697 62 1 0 chrX 143938601 143939570 -22710726 + L1_Mus1 LINE L1 5598 6567 0 6 1683 3131 43 2 8 chrX 143939709 143940104 -22710192 + L1Md_F2 LINE L1 6188 6580 -2 6 1683 234 0 0 0 chrX 143940117 143940143 -22710153 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 6 1683 47 19 0 0 chrX 143940517 143940571 -22709725 + AT_rich Low_complexity Low_complexity 1 54 0 6 1683 27 23 0 22 chrX 143940684 143940709 -22709587 + AT_rich Low_complexity Low_complexity 1 25 0 6 1683 5284 73 4 4 chrX 143940709 143941410 -22708886 - L1Md_F2 LINE L1 -6 6576 5876 6 1683 27 23 0 22 chrX 143941410 143941429 -22708867 + AT_rich Low_complexity Low_complexity 1 19 0 6 1683 1039 109 0 7 chrX 143941456 143941603 -22708693 - B1_Mus1 SINE Alu -1 147 2 6 1683 328 298 98 16 chrX 143941836 143941959 -22708337 + B1F1 SINE Alu 9 141 -8 6 1683 225 286 23 105 chrX 143942446 143942532 -22707764 + ID4 SINE ID 2 80 -3 6 1683 769 62 0 72 chrX 143944050 143944189 -22706107 - L1Md_F2 LINE L1 0 6582 6454 6 1683 441 0 0 0 chrX 143944627 143944676 -22705620 + (CAAAA)n Simple_repeat Simple_repeat 4 52 0 6 1683 478 312 26 26 chrX 143944692 143944886 -22705410 - Tigger5 DNA MER2_type -2212 194 1 6 1683 208 314 0 0 chrX 143944901 143944952 -22705344 + polypurine Low_complexity Low_complexity 5 55 0 6 1683 245 300 69 10 chrX 143944972 143945073 -22705223 + MLT1A1 LTR MaLR 39 145 -263 6 1683 194 236 18 35 chrX 143945303 143945360 -22704936 + L2c LINE L2 3256 3311 -76 6 1683 450 0 0 0 chrX 143946033 143946083 -22704213 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 1683 441 0 0 0 chrX 143946083 143946131 -22704165 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1683 759 245 56 0 chrX 143946779 143946975 -22703321 - B3 SINE B2 -2 214 8 6 1683 323 197 66 0 chrX 143947200 143947276 -22703020 - Lx7 LINE L1 -4 7692 7612 6 1683 24 53 0 0 chrX 143947288 143947326 -22702970 + AT_rich Low_complexity Low_complexity 1 38 0 6 1683 1060 222 115 60 chrX 143947335 143947718 -22702578 - Lx7 LINE L1 -205 7491 7088 6 1683 734 254 48 10 chrX 143947754 143947961 -22702335 - B3 SINE B2 0 216 2 6 1683 397 124 65 31 chrX 143948204 143948308 -22701988 + B1_Mur3 SINE Alu 2 148 -1 6 1683 368 335 85 124 chrX 143948456 143948739 -22701557 + B4 SINE B4 3 274 -18 6 1683 534 276 88 10 chrX 143948881 143949075 -22701221 + L1_Mur2 LINE L1 4617 4825 -1052 6 1683 2281 162 12 0 chrX 143949081 143949483 -22700813 - Lx2 LINE L1 -1 6996 6590 6 1683 1502 139 8 0 chrX 143949483 143949720 -22700576 + Lx2 LINE L1 6341 6579 -418 6 1683 21 36 0 0 chrX 143949721 143949749 -22700547 + AT_rich Low_complexity Low_complexity 1 28 0 6 1683 1519 254 93 72 chrX 143949907 143950823 -22699473 - Lx7 LINE L1 -1721 5975 5081 6 1683 1140 298 41 38 chrX 143950791 143951210 -22699086 - Lx9 LINE L1 -848 6796 6377 6 1683 1275 65 6 6 chrX 143951305 143951476 -22698820 + B2_Mm1t SINE B2 1 171 -22 6 1683 307 158 318 40 chrX 143951546 143951661 -22698635 + B2_Mm2 SINE B2 47 193 -2 6 1683 376 295 11 88 chrX 143951664 143951846 -22698450 + Lx9 LINE L1 6869 7036 -608 6 1683 2804 229 50 50 chrX 143951848 143952566 -22697730 + Lx7 LINE L1 6966 7683 -13 6 1683 366 80 0 0 chrX 143952568 143952618 -22697678 + (GGA)n Simple_repeat Simple_repeat 3 52 0 6 1683 333 237 145 26 chrX 143952739 143952856 -22697440 - HAL1 LINE L1 -2321 186 56 6 1683 23 0 0 0 chrX 143952863 143952886 -22697410 + AT_rich Low_complexity Low_complexity 1 23 0 6 1683 457 256 60 30 chrX 143953294 143953427 -22696869 + ID_B1 SINE B4 86 222 -2 6 1683 275 316 0 64 chrX 143954485 143954563 -22695733 + Lx3B LINE L1 6120 6191 -1505 6 1683 438 127 0 0 chrX 143954563 143954634 -22695662 + (TA)n Simple_repeat Simple_repeat 1 71 0 6 1683 275 316 0 64 chrX 143954634 143954680 -22695616 + Lx3B LINE L1 6192 6236 -1460 6 1683 6140 58 1 0 chrX 143954731 143955501 -22694795 + L1Md_F2 LINE L1 4816 5586 -297 6 1683 7904 47 10 3 chrX 143955501 143956478 -22693818 + L1Md_F2 LINE L1 5587 6570 -12 6 1683 279 356 16 85 chrX 143956500 143956629 -22693667 - PB1 SINE Alu -3 124 5 6 1683 249 376 47 7 chrX 143957293 143957443 -22692853 - MIRb SINE MIR -14 254 99 6 1683 409 312 34 34 chrX 143957613 143957759 -22692537 + B3A SINE B2 6 151 -47 6 1683 486 33 0 0 chrX 143957761 143957821 -22692475 + (CA)n Simple_repeat Simple_repeat 1 60 0 7 1683 359 166 8 81 chrX 143957825 143957911 -22692385 - B1_Mur4 SINE Alu -64 84 1 7 1683 377 288 53 41 chrX 143957913 143958159 -22692137 - MIR SINE MIR -9 253 5 7 1683 369 0 0 0 chrX 143958452 143958493 -22691803 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1683 283 365 62 0 chrX 143958580 143958676 -22691620 + MER2 DNA MER2_type 244 345 0 7 1683 394 282 26 0 chrX 143958704 143958821 -22691475 + MIR SINE MIR 121 240 -22 7 1683 238 288 41 0 chrX 143958837 143958910 -22691386 + ID4 SINE ID 3 78 -5 7 1683 24 0 0 0 chrX 143959082 143959106 -22691190 + AT_rich Low_complexity Low_complexity 1 24 0 7 1683 289 248 169 8 chrX 143959154 143959272 -22691024 + MER5A1 DNA MER1_type 30 166 0 7 1683 21 57 0 0 chrX 143959358 143959393 -22690903 + AT_rich Low_complexity Low_complexity 1 35 0 7 1683 252 248 37 31 chrX 143959395 143959557 -22690739 + (TTATA)n Simple_repeat Simple_repeat 4 166 0 7 1683 637 281 23 23 chrX 143959567 143959782 -22690514 - B3 SINE B2 -1 215 1 7 1683 1529 121 70 126 chrX 143960280 143960638 -22689658 + Lx3B LINE L1 6275 6969 -4 6 1683 26 30 0 0 chrX 143960796 143960829 -22689467 + AT_rich Low_complexity Low_complexity 1 33 0 7 1683 419 312 108 17 chrX 143961534 143961710 -22688586 + MLT1D LTR MaLR 1 192 -313 7 1683 558 310 74 34 chrX 143961812 143962104 -22688192 + MLT1D LTR MaLR 172 503 -2 7 1683 350 327 129 12 chrX 143963119 143963289 -22687007 - MIRb SINE MIR -54 214 25 7 1683 887 308 72 102 chrX 143963693 143964224 -22686072 - LTR40a LTR ERVL -4 515 1 7 1683 381 93 0 0 chrX 143964225 143964279 -22686017 + (T)n Simple_repeat Simple_repeat 1 54 0 7 1683 2002 55 3 42 chrX 143964549 143964832 -22685464 - L1_Mus1 LINE L1 -14 6553 6282 7 1683 315 256 0 37 chrX 143964875 143964956 -22685340 + ID4_ SINE ID 5 82 -1 7 1683 2877 250 3 48 chrX 143967015 143967725 -22682571 + Lx8 LINE L1 6239 6916 -557 7 1683 200 35 35 0 chrX 143968498 143968527 -22681769 + (TAA)n Simple_repeat Simple_repeat 1 30 0 7 1683 22 56 0 0 chrX 143968531 143968567 -22681729 + AT_rich Low_complexity Low_complexity 1 36 0 7 1683 360 0 0 0 chrX 143968984 143969024 -22681272 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 1683 542 312 0 0 chrX 143971528 143971669 -22678627 + B1F SINE Alu 1 141 -8 7 1683 207 0 0 0 chrX 143971671 143971694 -22678602 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1683 2372 116 25 28 chrX 143971712 143972110 -22678186 + RLTR9D LTR ERVK 1 397 -6 7 1683 210 128 0 0 chrX 143972591 143972630 -22677666 + (T)n Simple_repeat Simple_repeat 1 39 0 7 1683 252 0 0 0 chrX 143972631 143972659 -22677637 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 1683 473 306 101 71 chrX 143972694 143972961 -22677335 - B4 SINE B4 -10 282 8 7 1683 1309 256 98 10 chrX 143973005 143973891 -22676405 + Lx6 LINE L1 6190 7432 -28 7 1683 330 339 85 0 chrX 143973917 143974047 -22676249 + B1F SINE Alu 1 141 -8 7 1683 527 233 42 2 chrX 143974295 143974475 -22675821 + L1M4 LINE L1 3810 3997 -2149 7 1683 1920 150 44 62 chrX 143974475 143974860 -22675436 + ORR1C1 LTR MaLR 1 378 0 7 1683 375 288 63 29 chrX 143974860 143975035 -22675261 + L1M4 LINE L1 3993 4173 -1973 7 1683 657 251 78 48 chrX 143975052 143975282 -22675014 + Lx8 LINE L1 7226 7462 -11 7 1683 1989 218 25 10 chrX 143975297 143975705 -22674591 + RMER1B Other Other 25 438 -628 7 1683 2667 216 103 48 chrX 143975671 143976592 -22673704 + RMER1B Other Other 45 1063 -3 7 1683 513 47 0 0 chrX 143976746 143976810 -22673486 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 1683 3765 120 33 21 chrX 143977621 143978233 -22672063 - Lx LINE L1 -3 6651 6033 7 1683 1426 127 5 0 chrX 143978233 143978445 -22671851 + Lx LINE L1 5833 6045 -609 7 1683 376 304 10 0 chrX 143978616 143978718 -22671578 - MER20 DNA MER1_type -45 174 72 7 1683 609 290 38 24 chrX 143979581 143979793 -22670503 - ID_B1 SINE B4 -8 216 2 7 1683 1531 189 166 96 chrX 143980070 143980485 -22669811 + MT2A LTR ERVL 16 459 -74 7 1683 380 138 23 0 chrX 143980485 143980572 -22669724 + (TAGA)n Simple_repeat Simple_repeat 2 90 0 7 1683 246 200 0 28 chrX 143980619 143980688 -22669608 + MLT2B5 LTR ERVL 488 551 -4 7 1683 265 222 0 69 chrX 143980830 143980888 -22669408 - ID4 SINE ID -17 66 13 7 1683 669 213 121 10 chrX 143981048 143981247 -22669049 + Lx9 LINE L1 7423 7643 -1 7 1683 795 196 0 0 chrX 143982394 143982537 -22667759 - B1_Mus1 SINE Alu -3 145 3 7 1683 472 257 132 26 chrX 143983301 143983453 -22666843 - MER5B DNA MER1_type -10 168 1 7 1683 21 36 0 0 chrX 143984148 143984176 -22666120 + AT_rich Low_complexity Low_complexity 1 28 0 7 1683 207 0 0 0 chrX 143984571 143984594 -22665702 + (TA)n Simple_repeat Simple_repeat 1 23 0 7 1683 974 285 80 48 chrX 143984645 143985243 -22665053 + L1MA5A LINE L1 5313 5929 -368 7 1683 295 325 34 34 chrX 143985258 143985376 -22664920 + MT2B LTR ERVL 137 254 -347 7 1683 488 264 91 0 chrX 143985291 143985412 -22664884 + B1F SINE Alu 10 141 -8 7 1683 444 301 114 65 chrX 143985424 143985687 -22664609 + B4 SINE B4 1 276 -16 7 1683 670 320 82 23 chrX 143985821 143986077 -22664219 + B4 SINE B4 17 287 -5 7 1683 353 72 0 35 chrX 143986370 143986428 -22663868 + (GGA)n Simple_repeat Simple_repeat 2 57 0 7 1683 183 214 0 0 chrX 143988474 143988544 -22661752 + (CCA)n Simple_repeat Simple_repeat 3 72 0 7 1683 1135 69 0 0 chrX 143989946 143990091 -22660205 + B1_Mus1 SINE Alu 2 146 -2 7 1683 513 0 0 0 chrX 143990091 143990148 -22660148 + (GA)n Simple_repeat Simple_repeat 2 58 0 7 1683 216 0 0 0 chrX 143990352 143990376 -22659920 + (TAA)n Simple_repeat Simple_repeat 2 25 0 7 1683 333 236 111 0 chrX 143990644 143990716 -22659580 + ID4_ SINE ID 1 80 -3 7 1683 462 313 78 29 chrX 143991432 143991636 -22658660 + RMER15 LTR ERVL 346 559 -16 7 1683 293 254 0 0 chrX 143992625 143992688 -22657608 + ID4 SINE ID 4 66 -17 7 1683 432 293 56 21 chrX 143993266 143993409 -22656887 - RSINE1 SINE B4 -15 150 3 7 1683 318 358 0 44 chrX 143993616 143993730 -22656566 - PB1D10 SINE Alu -2 115 7 7 1683 547 51 0 25 chrX 143993908 143993989 -22656307 + L1_Mus2 LINE L1 6488 6566 0 7 1683 660 197 53 8 chrX 143993998 143994131 -22656165 + B1_Mur4 SINE Alu 5 143 -7 7 1683 783 32 0 0 chrX 143994134 143994228 -22656068 + (GGA)n Simple_repeat Simple_repeat 2 95 0 7 1683 221 358 18 79 chrX 143994599 143994763 -22655533 + MIRb SINE MIR 53 206 -62 7 1683 461 283 35 21 chrX 143995475 143995616 -22654680 + ID_B1 SINE B4 82 224 0 7 1683 420 20 0 0 chrX 143995797 143995846 -22654450 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1683 463 209 50 34 chrX 143996302 143996421 -22653875 - ORR1B1-int LTR MaLR -1327 636 516 7 1683 2511 174 23 98 chrX 143996414 143997061 -22653235 - ORR1B1-int LTR MaLR -898 611 16 7 1683 1945 171 53 16 chrX 143997061 143997441 -22652855 - ORR1B1 LTR MaLR 0 394 1 7 1683 407 91 26 0 chrX 143997754 143997831 -22652465 + (TCTG)n Simple_repeat Simple_repeat 2 80 0 7 1683 399 41 0 0 chrX 143997841 143997890 -22652406 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 1683 317 261 92 9 chrX 143997891 143998029 -22652267 - Lx5 LINE L1 -1147 5903 5720 7 1683 276 366 0 0 chrX 143998037 143998119 -22652177 - B1F1 SINE Alu -8 141 60 7 1683 2110 223 66 14 chrX 143998119 143998620 -22651676 + Lx2B LINE L1 6473 6999 -1 7 1683 402 162 0 0 chrX 143998620 143998694 -22651602 + GA-rich Low_complexity Low_complexity 2 75 0 7 1683 247 281 15 45 chrX 143998829 143998896 -22651400 - PB1D10 SINE Alu -83 65 1 7 1683 237 312 0 0 chrX 143998840 143998904 -22651392 - B4A SINE B4 -151 141 78 7 1683 281 339 50 74 chrX 143999356 143999526 -22650770 + L2c LINE L2 3083 3243 -144 7 1683 285 316 18 0 chrX 143999526 143999640 -22650656 - PB1D10 SINE Alu 0 117 2 7 1683 281 339 50 74 chrX 143999640 143999727 -22650569 + L2c LINE L2 3244 3333 -54 7 1683 183 42 0 0 chrX 144000506 144000530 -22649766 + (TTTAA)n Simple_repeat Simple_repeat 2 25 0 1 1683 733 217 0 15 chrX 144000566 144000697 -22649599 - B3 SINE B2 -86 130 2 2 1683 486 0 0 0 chrX 144001061 144001115 -22649181 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1683 501 17 0 0 chrX 144001115 144001172 -22649124 + (GA)n Simple_repeat Simple_repeat 2 59 0 4 1683 230 308 24 49 chrX 144001296 144001460 -22648836 - RLTR21 LTR ERVK -339 1233 1074 5 1683 388 378 54 54 chrX 144001628 144001944 -22648352 - L2b LINE L2 -1 3374 3059 6 1683 1350 74 0 0 chrX 144002162 144002407 -22647889 + (CAGAGA)n Simple_repeat Simple_repeat 1 245 0 7 1683 253 261 72 0 chrX 144002416 144002485 -22647811 - B1_Mus1 SINE Alu -64 84 11 8 1683 239 104 21 0 chrX 144002516 144002564 -22647732 + (TTTG)n Simple_repeat Simple_repeat 1 49 0 9 1683 626 250 7 20 chrX 144002576 144002723 -22647573 - ID_B1 SINE B4 0 224 80 1 1683 22 56 0 0 chrX 144004045 144004081 -22646215 + AT_rich Low_complexity Low_complexity 1 36 0 1 1683 414 0 0 0 chrX 144004206 144004252 -22646044 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 1683 396 0 0 0 chrX 144005907 144005951 -22644345 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 1 1683 552 201 19 32 chrX 144006036 144006190 -22644106 + ID_B1 SINE B4 14 222 -2 1 1683 3877 78 2 83 chrX 144006539 144007139 -22643157 + L1_Mus1 LINE L1 6017 6567 0 1 1683 262 253 44 88 chrX 144007447 144007538 -22642758 + PB1D10 SINE Alu 20 106 -11 1 1683 1369 87 0 5 chrX 144007649 144007834 -22642462 + B2_Mm2 SINE B2 1 184 -11 1 1683 6170 69 6 10 chrX 144007856 144008681 -22641615 - L1_Mus2 LINE L1 -1 6565 5744 1 1683 932 123 127 12 chrX 144008788 144008961 -22641335 + B2_Mm2 SINE B2 1 193 -2 1 1683 404 293 162 0 chrX 144009005 144009172 -22641124 + B3A SINE B2 4 197 -1 2 1683 348 83 0 0 chrX 144009180 144009228 -22641068 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 1683 218 321 131 36 chrX 144009287 144009455 -22640841 + L2a LINE L2 2633 2816 -603 2 1683 388 218 292 26 chrX 144009556 144009669 -22640627 + PB1 SINE Alu 1 143 -6 2 1683 547 336 7 0 chrX 144009727 144009867 -22640429 + RSINE1 SINE B4 2 142 -23 2 1683 183 42 0 0 chrX 144009882 144009906 -22640390 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 2 1683 496 260 54 60 chrX 144010140 144010324 -22639972 + RMER15 LTR ERVL 30 212 -363 2 1683 690 303 60 0 chrX 144010703 144010921 -22639375 + RMER15 LTR ERVL 345 575 0 2 1683 373 312 122 61 chrX 144010930 144011032 -22639264 + L2a LINE L2 3050 3163 -263 2 1683 3216 37 37 0 chrX 144011032 144011414 -22638882 + MTA_Mm LTR MaLR 1 396 0 2 1683 373 312 122 61 chrX 144011414 144011605 -22638691 + L2a LINE L2 3164 3361 -65 2 1683 213 175 0 0 chrX 144011646 144011686 -22638610 + CT-rich Low_complexity Low_complexity 2 41 0 2 1683 8161 21 0 0 chrX 144011784 144012942 -22637354 - L1Md_T LINE L1 0 6582 5444 2 1683 540 30 0 0 chrX 144012953 144013019 -22637277 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 3 1683 230 0 0 32 chrX 144013019 144013050 -22637246 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 3 1683 1249 41 0 0 chrX 144013055 144013202 -22637094 - B1_Mm SINE Alu 0 147 1 3 1683 279 323 0 0 chrX 144013266 144013331 -22636965 - ID4_ SINE ID -9 74 10 3 1683 500 337 25 46 chrX 144013741 144013937 -22636359 + MTEa LTR MaLR 3 194 -185 3 1683 22 35 0 0 chrX 144015357 144015386 -22634910 + AT_rich Low_complexity Low_complexity 1 29 0 3 1683 223 283 0 36 chrX 144016718 144016773 -22633523 + B1F1 SINE Alu 53 105 -44 3 1683 255 204 43 17 chrX 144016797 144016820 -22633476 + A-rich Low_complexity Low_complexity 4 26 0 3 1683 5062 61 9 0 chrX 144016820 144017546 -22632750 + L1_Mus2 LINE L1 5926 6566 0 3 1683 21 36 0 0 chrX 144017556 144017584 -22632712 + AT_rich Low_complexity Low_complexity 1 28 0 3 1683 1946 180 48 30 chrX 144017591 144017986 -22632310 - RMER10A LTR ERVL -14 428 27 4 1683 542 261 140 83 chrX 144017983 144018368 -22631928 + RMER10A LTR ERVL 36 442 0 4 1683 443 276 86 8 chrX 144019669 144019797 -22630499 - B1F1 SINE Alu 0 149 12 4 1683 298 294 0 89 chrX 144019706 144019818 -22630478 - MT2B2 LTR ERVL -327 257 156 4 1683 727 286 14 27 chrX 144019842 144020065 -22630231 + ID_B1 SINE B4 5 224 0 4 1683 495 49 24 24 chrX 144020065 144020149 -22630147 + (GAAA)n Simple_repeat Simple_repeat 1 84 0 4 1683 210 128 0 0 chrX 144020204 144020243 -22630053 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1683 2914 161 76 27 chrX 144020259 144020879 -22629417 + RLTR40 LTR ERVK 15 664 -153 4 1683 208 239 0 15 chrX 144020965 144021014 -22629282 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1683 369 0 0 0 chrX 144021014 144021055 -22629241 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1683 208 239 0 15 chrX 144021055 144021073 -22629223 + (TA)n Simple_repeat Simple_repeat 2 19 0 4 1683 180 0 0 0 chrX 144022025 144022045 -22628251 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5 1683 481 260 32 77 chrX 144022045 144022166 -22628130 - Lx6 LINE L1 -22 7438 7326 5 1683 5306 96 18 58 chrX 144022166 144023003 -22627293 + RLTR13B4 LTR ERVK 1 803 0 5 1683 481 260 32 77 chrX 144023003 144023094 -22627202 - Lx6 LINE L1 -135 7325 7236 5 1683 20417 100 15 1 chrX 144023183 144027035 -22623261 + L1Md_F LINE L1 380 4286 -1597 5 1683 1775 70 0 0 chrX 144027030 144027273 -22623023 - L1_Mm LINE L1 -869 5014 4772 5 1683 2588 88 11 8 chrX 144027275 144027641 -22622655 + L1Md_F2 LINE L1 6202 6568 -14 5 1683 334 329 161 9 chrX 144027764 144027994 -22622302 - MIRb SINE MIR 0 268 4 5 1683 2069 151 3 0 chrX 144028052 144028370 -22621926 + ORR1A2 LTR MaLR 1 319 -8 5 1683 591 353 59 52 chrX 144028380 144028667 -22621629 - B4A SINE B4 -2 290 2 5 1683 602 281 188 13 chrX 144029072 144029296 -22621000 + B4A SINE B4 11 273 -19 5 1683 420 55 0 0 chrX 144029300 144029355 -22620941 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1683 358 283 9 45 chrX 144029365 144029476 -22620820 + PB1D7 SINE Alu 5 111 -9 6 1683 718 274 94 0 chrX 144029484 144029685 -22620611 + ID_B1 SINE B4 2 221 -3 6 1683 415 138 146 21 chrX 144029692 144029788 -22620508 + Lx2 LINE L1 6890 6997 0 6 1683 373 390 0 25 chrX 144029862 144030020 -22620276 - ID_B1 SINE B4 -70 154 1 6 1683 986 176 0 71 chrX 144030537 144030776 -22619520 - RMER1B Other Other -4 1062 841 6 1683 468 227 41 28 chrX 144030800 144030945 -22619351 - Lx6 LINE L1 -26 7434 7288 6 1683 3037 45 39 8 chrX 144031084 144031468 -22618828 + MTA_Mm LTR MaLR 1 396 0 6 1683 213 39 0 0 chrX 144031936 144031962 -22618334 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1683 900 132 0 0 chrX 144031964 144032130 -22618166 + (GA)n Simple_repeat Simple_repeat 2 167 0 6 1683 1813 180 45 5 chrX 144032462 144032557 -22617739 - L1_Mur3 LINE L1 -6452 1260 1151 7 1683 612 144 0 8 chrX 144032557 144032676 -22617620 - Lx2B LINE L1 -4 6996 6879 7 1683 1813 180 45 5 chrX 144032676 144033020 -22617276 - L1_Mur3 LINE L1 -6562 1150 804 7 1683 232 162 49 24 chrX 144033131 144033213 -22617083 - L1M4 LINE L1 -973 5173 5090 7 1683 313 252 19 37 chrX 144033340 144033447 -22616849 + B3A SINE B2 94 198 0 7 1683 1209 192 5 0 chrX 144033640 144033864 -22616432 - URR1A DNA MER1_type 0 226 2 7 1683 294 247 0 0 chrX 144033888 144033965 -22616331 + (TATATG)n Simple_repeat Simple_repeat 5 81 0 7 1683 844 246 106 62 chrX 144033967 144034240 -22616056 - MT2B LTR ERVL -43 558 274 7 1683 17856 66 10 0 chrX 144034276 144036751 -22613545 + L1Md_F2 LINE L1 3088 5586 -297 7 1683 8253 39 3 1 chrX 144036752 144037741 -22612555 + L1Md_F2 LINE L1 5588 6578 -4 7 1683 394 243 15 43 chrX 144037749 144037885 -22612411 - MT2B LTR ERVL -468 133 1 7 1683 4483 172 16 45 chrX 144037885 144038333 -22611963 - MERVL_2A-int LTR ERVL 0 5761 5309 7 1683 1040 101 0 0 chrX 144038333 144038482 -22611814 - L1_Mus1 LINE L1 0 6567 6419 7 1683 4483 172 16 45 chrX 144038482 144038987 -22611309 - MERVL_2A-int LTR ERVL -453 5308 4836 7 1683 1972 175 59 15 chrX 144038991 144039380 -22610916 + MTC-int LTR MaLR 23 428 -830 7 1683 261 139 0 0 chrX 144039380 144039423 -22610873 + (T)n Simple_repeat Simple_repeat 1 43 0 8 1683 4469 67 3 0 chrX 144039430 144039994 -22610302 - L1_Mus1 LINE L1 0 6567 6002 8 1683 465 254 17 9 chrX 144040005 144040120 -22610176 + MTC-int LTR MaLR 1063 1178 -785 7 1683 290 18 33 66 chrX 144040122 144040183 -22610113 + (TTTTTG)n Simple_repeat Simple_repeat 2 60 0 8 1683 10167 74 4 5 chrX 144040185 144042283 -22608013 - L1Md_F2 LINE L1 0 6582 4490 8 1683 683 164 0 8 chrX 144042283 144042406 -22607890 + MTC-int LTR MaLR 526 647 -611 8 1683 244 339 0 0 chrX 144042791 144042853 -22607443 + ID SINE ID 1 62 -162 8 1683 274 317 68 19 chrX 144042958 144043061 -22607235 + PB1D7 SINE Alu 3 110 -10 8 1683 183 80 0 0 chrX 144043093 144043118 -22607178 + (TTTTTG)n Simple_repeat Simple_repeat 1 25 0 8 1683 369 312 0 18 chrX 144043192 144043303 -22606993 - ID_B1 SINE B4 -108 116 8 8 1683 278 295 45 45 chrX 144043353 144043463 -22606833 - PB1D10 SINE Alu -6 111 2 8 1683 3950 154 100 92 chrX 144043605 144044494 -22605802 + RMER19B LTR ERVK 1 896 -6 9 1683 563 320 35 25 chrX 144044673 144044875 -22605421 - B4 SINE B4 -8 284 81 9 1683 405 257 69 44 chrX 144044896 144045055 -22605241 - RSINE1 SINE B4 0 165 3 9 1683 2388 205 58 17 chrX 144045454 144046161 -22604135 - MTC-int LTR MaLR -476 782 1 9 1683 1811 182 80 25 chrX 144046161 144046560 -22603736 - MTC LTR MaLR 0 421 1 9 1683 2589 240 45 6 chrX 144046568 144047285 -22603011 - Lx9 LINE L1 -593 7051 6307 9 1683 226 333 0 39 chrX 144047611 144047689 -22602607 + MER5A DNA MER1_type 92 166 -23 9 210 1994 181 34 5 chrX 144047833 144048216 -22602080 + ORR1B1 LTR MaLR 1 394 0 9 1684 687 272 36 10 chrX 144048275 144048468 -22601828 + B3A SINE B2 1 198 0 9 1684 1236 265 138 29 chrX 144048893 144049406 -22600890 - RMER4B LTR ERVK -16 569 1 9 1684 457 315 132 37 chrX 144050081 144050309 -22599987 - RLTR22_Mur LTR ERVK -197 1375 1094 9 1684 432 0 0 0 chrX 144050309 144050357 -22599939 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1684 697 202 68 70 chrX 144050357 144050637 -22599659 - RLTR22_Mur LTR ERVK -432 890 739 9 1684 1408 271 66 139 chrX 144050667 144051566 -22598730 - RLTR22_Mur LTR ERVK -1015 833 1 9 1684 342 0 0 0 chrX 144053676 144053714 -22596582 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1684 630 121 0 0 chrX 144053714 144053830 -22596466 + (GA)n Simple_repeat Simple_repeat 1 116 0 1 1684 479 17 17 0 chrX 144053912 144053972 -22596324 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 1684 7794 40 1 0 chrX 144053987 144055193 -22595103 - L1Md_F2 LINE L1 -12 6570 5364 1 1684 270 0 0 0 chrX 144057753 144057783 -22592513 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1 1684 800 246 29 14 chrX 144057797 144058007 -22592289 - Lx4B LINE L1 -36 7022 6810 1 1684 289 159 36 24 chrX 144058014 144058098 -22592198 + (TTTG)n Simple_repeat Simple_repeat 1 85 0 1 1684 770 229 14 0 chrX 144058099 144058243 -22592053 - B1_Mus1 SINE Alu -2 146 1 1 1684 867 235 32 5 chrX 144058266 144058484 -22591812 - Lx5 LINE L1 -2 7048 6825 1 1684 292 153 203 27 chrX 144058487 144058561 -22591735 - Lx9 LINE L1 -1 7643 7557 1 1684 544 193 110 41 chrX 144058558 144058647 -22591649 + Lx9 LINE L1 7216 7310 -334 1 1684 441 0 0 0 chrX 144058647 144058696 -22591600 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1684 544 193 110 41 chrX 144058696 144058752 -22591544 + Lx9 LINE L1 7311 7371 -273 1 1684 3993 134 37 2 chrX 144058752 144059371 -22590925 + L1VL4 LINE L1 194 834 -5468 1 1684 15245 89 14 8 chrX 144059338 144060539 -22589757 + MusHAL1 LINE L1 118 1340 -1372 1 1684 4496 27 12 0 chrX 144060539 144061026 -22589270 - MT2_Mm LTR ERVL 0 493 1 1 1684 15245 89 14 8 chrX 144061026 144062037 -22588259 + MusHAL1 LINE L1 1341 2344 -368 1 1684 1459 88 0 0 chrX 144062201 144062383 -22587913 + L1_Mus1 LINE L1 6377 6558 -9 1 1684 26588 90 2 7 chrX 144062384 144066582 -22583714 + L1Md_A LINE L1 631 4806 -1077 1 1684 24848 91 2 1 chrX 144066579 144070827 -22579469 - L1Md_F LINE L1 -1276 4607 356 1 1684 1355 256 59 17 chrX 144070975 144071329 -22578967 - ORR1D2 LTR MaLR 0 370 2 1 1684 979 240 5 42 chrX 144071420 144071504 -22578792 + B3 SINE B2 1 81 -135 1 1684 4055 175 28 55 chrX 144071504 144072262 -22578034 - RMER19A LTR ERVK 0 737 1 1 1684 979 240 5 42 chrX 144072262 144072394 -22577902 + B3 SINE B2 82 209 -7 1 1684 528 309 68 15 chrX 144072505 144072771 -22577525 - L1M2 LINE L1 -3289 2854 2575 1 1684 280 242 75 32 chrX 144072771 144072865 -22577431 + MTE2b LTR MaLR 1 98 -281 1 1684 1181 305 6 28 chrX 144072865 144073192 -22577104 + MTE2b LTR MaLR 58 377 -2 1 1684 336 321 70 52 chrX 144073229 144073574 -22576722 - L1_Mur3 LINE L1 -3352 2528 2178 1 1684 224 149 0 21 chrX 144073590 144073638 -22576658 + T-rich Low_complexity Low_complexity 2 48 0 1 1684 1247 68 0 0 chrX 144073640 144073788 -22576508 - B1_Mus1 SINE Alu 0 148 1 1 1684 3017 31 0 0 chrX 144073814 144074140 -22576156 + IAPLTR3 LTR ERVK 1 326 0 1 1684 61471 17 4 0 chrX 144074140 144080914 -22569382 + IAPLTR3-int LTR ERVK 1 6801 -20 1 1684 416 58 0 0 chrX 144080914 144080966 -22569330 + IAPLTR3 LTR ERVK 1 52 -274 1 1684 284 143 18 0 chrX 144081057 144081113 -22569183 + T-rich Low_complexity Low_complexity 2 58 0 1 1684 1247 68 0 0 chrX 144081113 144081261 -22569035 - B1_Mus1 SINE Alu 0 148 1 1 1684 3037 28 0 0 chrX 144081287 144081613 -22568683 + IAPLTR3 LTR ERVK 1 326 0 1 1684 623 206 39 16 chrX 144081687 144081815 -22568481 + B1_Mur3 SINE Alu 13 143 -6 1 1684 569 268 86 23 chrX 144081911 144082174 -22568122 + L1M4 LINE L1 4629 4922 -1224 1 1684 331 326 68 37 chrX 144082466 144082657 -22567639 - L1MEf LINE L1 -4723 1477 1281 1 1684 3245 182 50 16 chrX 144083097 144083716 -22566580 - Lx2B LINE L1 -8 6992 6353 1 1684 4144 95 28 13 chrX 144083803 144084412 -22565884 - Lx3_Mus LINE L1 0 7009 6392 1 1684 39325 37 7 9 chrX 144084403 144090618 -22559678 - L1Md_T LINE L1 0 6582 381 1 1684 5463 97 27 31 chrX 144090601 144090827 -22559469 - Lx3_Mus LINE L1 -586 6423 6205 1 1684 504 0 0 0 chrX 144090827 144090883 -22559413 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1684 14863 82 11 6 chrX 144090883 144093188 -22557108 - Lx3_Mus LINE L1 -805 6204 3888 1 1684 35721 70 1 2 chrX 144093168 144098648 -22551648 - L1Md_F2 LINE L1 0 6582 1123 1 1684 1885 34 24 60 chrX 144098648 144098896 -22551400 - L1Md_F3 LINE L1 0 6584 6346 1 1684 6563 102 21 14 chrX 144098896 144099718 -22550578 - L1Md_F2 LINE L1 -5494 1122 281 1 1684 11793 96 4 3 chrX 144099716 144101397 -22548899 - Lx3_Mus LINE L1 -1971 3915 2234 1 1684 1086 184 63 18 chrX 144101394 144101616 -22548680 - Lx2B LINE L1 -628 6372 6141 1 1684 697 167 80 0 chrX 144101612 144101750 -22548546 - L1_Mur2 LINE L1 -543 5334 5186 1 1684 417 252 116 16 chrX 144101750 144101879 -22548417 + MTC LTR MaLR 280 421 0 1 1684 3667 249 19 27 chrX 144101885 144102212 -22548084 + Lx6 LINE L1 5905 6233 -1227 1 1684 2148 151 80 8 chrX 144102212 144102587 -22547709 + RLTR9D LTR ERVK 1 402 -1 1 1684 3667 249 19 27 chrX 144102587 144103182 -22547114 + Lx6 LINE L1 6234 6820 -640 1 1684 1665 285 84 8 chrX 144103180 144103665 -22546631 + Lx6 LINE L1 6939 7460 0 1 1684 1203 226 20 45 chrX 144104024 144104316 -22545980 + RLTR21 LTR ERVK 1 285 -1287 1 1684 1437 154 112 10 chrX 144104334 144104629 -22545667 - IAPLTR4 LTR ERVK -20 325 1 1 1684 6294 252 52 36 chrX 144104629 144107137 -22543159 - IAPLTR3-int LTR ERVK -351 7329 3468 1 1684 906 66 35 49 chrX 144107246 144107389 -22542907 - MMERVK10C-int LTR ERVK -2911 4670 4530 1 1684 489 193 25 6 chrX 144107401 144107524 -22542772 - MMERVK10C-int LTR ERVK -2380 2464 2362 1 1684 7319 107 53 5 chrX 144107530 144108917 -22541379 - ETnERV3-int LTR ERVK -3135 4271 2732 1 1684 293 266 0 60 chrX 144108926 144109010 -22541286 - ETnERV3-int LTR ERVK -4867 2539 2461 1 1684 545 203 85 0 chrX 144109030 144109148 -22541148 - RMER16-int LTR ERVK -5077 1060 933 1 1684 1478 202 94 62 chrX 144109146 144109633 -22540663 - RMER16-int LTR ERVK -4783 623 251 1 1684 370 134 55 125 chrX 144109745 144109845 -22540451 - MMERVK10C-int LTR ERVK -6629 952 862 1 1684 12017 42 6 4 chrX 144109845 144111295 -22539001 - IAPLTR4_I LTR ERVK 0 1470 19 1 1684 1470 147 148 10 chrX 144111295 144111598 -22538698 - IAPLTR4 LTR ERVK 0 345 1 1 1684 274 122 0 0 chrX 144111598 144111639 -22538657 + RLTR21 LTR ERVK 282 322 -1250 1 1684 2202 186 19 46 chrX 144111678 144112203 -22538093 + RLTR21 LTR ERVK 551 1061 -511 1 1684 1842 120 86 0 chrX 144112218 144112519 -22537777 - IAPEY3_LTR LTR ERVK -5 327 1 1 1684 1160 214 62 12 chrX 144112519 144112859 -22537437 - IAPEz-int LTR ERVK 0 6481 6125 1 1684 33906 105 9 3 chrX 144112931 144118768 -22531528 - IAPEY3-int LTR ERVK -259 7254 1373 1 1684 258 154 19 0 chrX 144118756 144118808 -22531488 - IAPEY3-int LTR ERVK -7627 53 1 1 1684 1195 138 115 0 chrX 144118814 144119031 -22531265 - IAPEY3_LTR LTR ERVK -90 242 1 1 1684 265 210 125 39 chrX 144119033 144119137 -22531159 + RLTR21 LTR ERVK 1082 1194 -378 1 1684 664 213 92 29 chrX 144119201 144119375 -22530921 - ORR1B2 LTR MaLR -182 185 1 1 1684 282 148 0 0 chrX 144119410 144119464 -22530832 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 1684 314 248 20 0 chrX 144119472 144119573 -22530723 + (TAGA)n Simple_repeat Simple_repeat 3 105 0 1 1684 267 31 0 0 chrX 144119615 144119647 -22530649 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1684 21 36 0 0 chrX 144120048 144120076 -22530220 + AT_rich Low_complexity Low_complexity 1 28 0 1 1684 21771 75 3 2 chrX 144121618 144125456 -22524840 - L1Md_F2 LINE L1 -13 6569 2726 1 1684 901 149 45 11 chrX 144127832 144128009 -22522287 + B2_Mm2 SINE B2 1 183 -12 1 1684 225 154 0 0 chrX 144128009 144128048 -22522248 + GA-rich Low_complexity Low_complexity 1 39 0 1 1684 30595 97 15 9 chrX 144128057 144133975 -22516321 - L1Md_F2 LINE L1 -235 6347 398 1 1684 21 0 0 0 chrX 144136993 144137014 -22513282 + AT_rich Low_complexity Low_complexity 1 21 0 1 1684 377 39 20 0 chrX 144137956 144138007 -22512289 + (CCTA)n Simple_repeat Simple_repeat 2 53 0 1 1684 419 125 14 0 chrX 144138685 144138757 -22511539 + (GGGA)n Simple_repeat Simple_repeat 3 75 0 1 1684 783 59 0 0 chrX 144138757 144138858 -22511438 + (GAAA)n Simple_repeat Simple_repeat 4 104 0 1 1684 2309 70 0 3 chrX 144139751 144140065 -22510231 + L1_Mm LINE L1 4663 4975 -908 1 1684 286 200 30 40 chrX 144140093 144140192 -22510104 + Lx7 LINE L1 6961 7058 -638 1 1684 6193 254 35 72 chrX 144140430 144142338 -22507958 - L1VL4 LINE L1 -892 4985 3191 1 1684 1207 62 0 0 chrX 144142338 144142484 -22507812 - B1_Mm SINE Alu 0 147 2 1 1684 6193 254 35 72 chrX 144142484 144142679 -22507617 - L1VL4 LINE L1 -2687 3190 2995 1 1684 216 0 0 0 chrX 144142679 144142703 -22507593 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 1684 6193 254 35 72 chrX 144142703 144143672 -22506624 - L1VL4 LINE L1 -2883 2994 2029 1 1684 292 281 58 26 chrX 144144014 144144204 -22506092 + L1_Mur3 LINE L1 5212 5407 -473 1 1684 2069 317 66 27 chrX 144144202 144145468 -22504828 + Lx7 LINE L1 6048 7383 -313 1 1684 282 29 0 0 chrX 144145468 144145503 -22504793 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1 1684 198 0 0 0 chrX 144145508 144145530 -22504766 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1684 2069 317 66 27 chrX 144145530 144145725 -22504571 + Lx7 LINE L1 7388 7573 -123 1 1684 230 304 108 42 chrX 144145738 144145858 -22504438 + MLT2B4 LTR ERVL 145 272 -284 1 1684 365 295 29 0 chrX 144145870 144145975 -22504321 - B3 SINE B2 0 216 109 1 1684 5111 230 25 17 chrX 144146144 144147634 -22502662 - Lx3C LINE L1 -33 6943 5427 1 1684 235 191 14 87 chrX 144147631 144147700 -22502596 + Lx3C LINE L1 5359 5422 -455 1 1684 24 0 0 0 chrX 144147721 144147745 -22502551 + AT_rich Low_complexity Low_complexity 1 24 0 1 1684 316 189 9 26 chrX 144148725 144148839 -22501457 + MYSERV16_I-int LTR ERVK 1116 1227 -1099 1 1684 356 197 0 0 chrX 144148841 144148912 -22501384 - RLTR15 LTR ERVK -276 83 13 1 1684 532 144 9 9 chrX 144149618 144149730 -22500566 - L1_Mur2 LINE L1 -2117 3760 3649 1 1684 3740 196 8 14 chrX 144149749 144150474 -22499822 - Lx3B LINE L1 -5 6968 6248 1 1684 6375 136 6 2 chrX 144150487 144151805 -22498491 + L1_Mus4 LINE L1 5314 6636 0 1 1684 204 125 0 0 chrX 144151816 144151848 -22498448 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 1684 744 255 37 0 chrX 144151850 144152066 -22498230 - L1_Mur2 LINE L1 -6269 817 594 1 1684 1006 257 73 38 chrX 144152065 144152614 -22497682 - L1VL4 LINE L1 -5364 1270 739 1 1684 733 240 25 116 chrX 144153566 144153949 -22496347 + RLTR46 LTR ERVK 1 357 0 1 1684 204 170 0 0 chrX 144155225 144155278 -22495018 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 1684 21 0 0 0 chrX 144156797 144156818 -22493478 + AT_rich Low_complexity Low_complexity 1 21 0 1 1684 201 217 0 0 chrX 144156901 144156984 -22493312 + (CA)n Simple_repeat Simple_repeat 1 83 0 1 1684 234 372 56 25 chrX 144157474 144157634 -22492662 + B3A SINE B2 1 165 -33 1 1684 28327 50 1 1 chrX 144157657 144162084 -22488212 - L1Md_F3 LINE L1 -11 6573 2146 1 1684 7299 48 1 2 chrX 144162105 144163048 -22487248 - L1Md_F2 LINE L1 -12 6570 5629 1 1684 1375 41 0 6 chrX 144163042 144163215 -22487081 + L1Md_F2 LINE L1 5457 5628 -255 1 1684 6517 119 40 5 chrX 144163215 144165105 -22485191 - L1Md_F3 LINE L1 -3723 2160 203 1 1684 364 389 16 36 chrX 144165524 144165716 -22484580 - B3 SINE B2 -19 197 10 1 1684 557 134 41 25 chrX 144165824 144165946 -22484350 + MurSatRep1 Unknown Unknown 1 124 -2013 1 1684 371 240 30 53 chrX 144165982 144166114 -22484182 - RLTR13D3 LTR ERVK -42 1072 944 1 1684 242 158 0 0 chrX 144166367 144166405 -22483891 - B2_Mm2 SINE B2 -157 38 1 1 1684 2852 6 0 0 chrX 144166497 144166816 -22483480 - L1Md_A LINE L1 -2 6580 6262 1 1684 2846 169 78 16 chrX 144167238 144167881 -22482415 + MurSatRep1 Unknown Unknown 121 803 -1334 1 1684 1974 192 14 5 chrX 144167900 144168323 -22481973 + MurSatRep1 Unknown Unknown 883 1309 -828 1 1684 3727 93 216 3 chrX 144168343 144168990 -22481306 + L1VL1 LINE L1 2 786 -5636 2 1684 24755 101 6 3 chrX 144168987 144172824 -22477472 + L1_Mm LINE L1 1252 5101 -782 2 1684 2358 87 3 22 chrX 144172821 144173186 -22477110 - L1_Mm LINE L1 -2340 3543 3186 2 1684 366 358 98 33 chrX 144173218 144173371 -22476925 - RSINE1 SINE B4 0 165 3 2 1684 277 226 16 0 chrX 144173384 144173446 -22476850 - B4 SINE B4 -217 75 13 2 1684 21 36 0 0 chrX 144173710 144173738 -22476558 + AT_rich Low_complexity Low_complexity 1 28 0 2 1684 4207 261 72 33 chrX 144173892 144175730 -22474566 - Lx9 LINE L1 -18 7626 5712 2 1684 326 231 0 85 chrX 144175708 144175826 -22474470 - L1_Rod LINE L1 -1525 4322 4215 2 1684 501 273 162 17 chrX 144176036 144176271 -22474025 + Lx8 LINE L1 7196 7464 -9 2 1684 265 291 68 23 chrX 144176306 144176394 -22473902 + B3A SINE B2 25 116 -82 2 1684 423 0 0 0 chrX 144176444 144176491 -22473805 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1684 428 315 7 37 chrX 144177720 144177855 -22472441 - B1F SINE Alu -1 148 18 2 1684 361 189 278 35 chrX 144177869 144177984 -22472312 - ORR1D1 LTR MaLR 0 374 232 2 1684 25 0 0 0 chrX 144178004 144178029 -22472267 + AT_rich Low_complexity Low_complexity 1 25 0 2 1684 517 324 74 0 chrX 144178161 144178330 -22471966 + B3A SINE B2 6 187 -11 2 1684 300 70 0 0 chrX 144178330 144178373 -22471923 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1684 492 18 0 0 chrX 144178855 144178912 -22471384 + (TC)n Simple_repeat Simple_repeat 1 57 0 2 1684 324 0 0 0 chrX 144178912 144178947 -22471349 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1684 202 250 0 13 chrX 144179147 144179187 -22471109 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 210 373 231 0 0 chrX 144179187 144179252 -22471044 - ID4_ SINE ID -17 66 2 2 1685 202 250 0 13 chrX 144179252 144179288 -22471008 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2 1685 479 314 75 6 chrX 144179316 144179476 -22470820 - ID_B1 SINE B4 -52 172 2 2 1685 231 286 0 0 chrX 144180023 144180079 -22470217 - ID4_ SINE ID -26 57 2 2 1685 629 343 12 1 chrX 144180636 144180829 -22469467 + ID_B1 SINE B4 6 210 -82 2 1685 195 162 0 0 chrX 144181144 144181181 -22469115 + GA-rich Low_complexity Low_complexity 3 39 0 2 1685 398 147 0 0 chrX 144182261 144182329 -22467967 - U3 snRNA snRNA -149 68 1 2 1685 195 234 0 0 chrX 144182630 144182707 -22467589 + (TG)n Simple_repeat Simple_repeat 2 78 0 2 1685 644 315 29 18 chrX 144182808 144183086 -22467210 - Lx9 LINE L1 -1081 6563 6283 2 1685 6252 121 25 17 chrX 144183086 144184255 -22466041 - Lx LINE L1 -1 6653 5476 2 1685 3991 74 37 26 chrX 144184253 144184906 -22465390 - MusHAL1 LINE L1 -444 2268 1609 2 1685 1632 154 0 46 chrX 144184906 144185191 -22465105 - RLTR45-int LTR ERVK -641 6765 6494 2 1685 1101 306 12 12 chrX 144185224 144185638 -22464658 - RNERVK23-int LTR ERVK -393 7824 7411 2 1685 647 315 48 61 chrX 144185339 144185816 -22464480 - MuRRS4-int LTR ERV1 -221 4842 4372 2 1685 4213 146 87 75 chrX 144186390 144187432 -22462864 - RLTR45-int LTR ERVK -1518 5726 4672 2 1685 632 89 0 0 chrX 144187419 144187509 -22462787 - ETnERV2-int LTR ERVK -1644 5762 5673 2 1685 2205 153 70 12 chrX 144187508 144187990 -22462306 - ETnERV2-int LTR ERVK -3962 3444 2935 2 1685 1084 245 62 21 chrX 144188017 144188305 -22461991 - ETnERV2-int LTR ERVK -4653 2753 2454 2 1685 271 120 0 39 chrX 144188318 144188370 -22461926 - RMER16-int LTR ERVK -5077 1060 1011 2 1685 1833 182 136 34 chrX 144188397 144188898 -22461398 - RMER16-int LTR ERVK -4587 819 268 2 1685 519 31 0 0 chrX 144188898 144188963 -22461333 + (TC)n Simple_repeat Simple_repeat 1 65 0 2 1685 327 65 0 0 chrX 144188963 144189008 -22461288 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1685 608 205 17 0 chrX 144189908 144190025 -22460271 - ETnERV2-int LTR ERVK -218 7188 7070 2 1685 231 247 130 0 chrX 144190041 144190118 -22460178 + MIR3 SINE MIR 85 171 -37 2 1685 244 350 20 10 chrX 144191814 144191912 -22458384 - MIRb SINE MIR -50 218 120 2 1685 486 335 32 9 chrX 144193162 144193379 -22456917 - MLT1E2 LTR MaLR -30 597 376 2 1685 189 0 0 0 chrX 144193638 144193659 -22456637 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2 1685 705 237 22 0 chrX 144193660 144193799 -22456497 - B1_Mus1 SINE Alu 0 148 7 2 1685 510 17 0 0 chrX 144193816 144193875 -22456421 + (GGAA)n Simple_repeat Simple_repeat 4 62 0 2 1685 205 302 0 0 chrX 144193966 144194019 -22456277 + GA-rich Low_complexity Low_complexity 4 56 0 2 1685 640 282 87 0 chrX 144194317 144194512 -22455784 + ID_B1 SINE B4 3 214 -10 2 1685 229 347 14 0 chrX 144194651 144194723 -22455573 - PB1D10 SINE Alu -36 81 9 2 1685 300 313 87 0 chrX 144194760 144194875 -22455421 - B1F SINE Alu -16 133 9 2 1685 282 316 26 0 chrX 144194907 144194983 -22455313 - ID4 SINE ID -4 79 2 2 1685 309 26 0 0 chrX 144195377 144195415 -22454881 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 2 1685 219 36 0 0 chrX 144195416 144195444 -22454852 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 1685 3437 28 2 0 chrX 144195517 144195912 -22454384 + MTA_Mm LTR MaLR 1 396 0 2 1685 235 242 47 31 chrX 144196310 144196374 -22453922 + tRNA-Ala-GCA tRNA tRNA 2 66 -9 2 1685 361 233 0 37 chrX 144196907 144197014 -22453282 + (TCTG)n Simple_repeat Simple_repeat 2 104 0 2 1685 269 348 107 0 chrX 144197038 144197150 -22453146 - B3A SINE B2 -22 176 53 2 1685 278 299 13 0 chrX 144197453 144197530 -22452766 + PB1D10 SINE Alu 40 117 0 2 1685 486 0 0 0 chrX 144197538 144197592 -22452704 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 1685 512 241 14 62 chrX 144198287 144198433 -22451863 - ID_B1 SINE B4 0 224 86 2 1685 387 0 0 0 chrX 144199155 144199198 -22451098 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 1685 222 313 44 15 chrX 144199274 144199320 -22450976 + RSINE1 SINE B4 92 138 -27 2 1685 423 0 0 0 chrX 144199320 144199367 -22450929 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1685 222 313 44 15 chrX 144199367 144199388 -22450908 + RSINE1 SINE B4 139 160 -5 2 1685 510 155 103 52 chrX 144199404 144199520 -22450776 - BC1_Mm scRNA scRNA -18 134 13 2 1685 238 49 0 0 chrX 144199520 144199561 -22450735 + L1_Mus2 LINE L1 6526 6566 0 2 1685 483 286 100 28 chrX 144199992 144200172 -22450124 + B3 SINE B2 24 216 0 2 1685 470 176 7 0 chrX 144201373 144201521 -22448775 + (TG)n Simple_repeat Simple_repeat 1 149 0 2 1685 322 288 8 25 chrX 144201704 144201825 -22448471 + PB1D9 SINE Alu 2 120 0 2 1685 220 326 0 0 chrX 144202521 144202610 -22447686 + (TG)n Simple_repeat Simple_repeat 2 90 0 2 1685 315 394 14 21 chrX 144202880 144203025 -22447271 - RSINE1 SINE B4 -19 146 3 2 1685 265 284 76 29 chrX 144203622 144203727 -22446569 - ID_B1 SINE B4 -7 217 108 2 1685 236 211 16 66 chrX 144203838 144203899 -22446397 + B4 SINE B4 15 72 -220 2 1685 543 235 108 34 chrX 144204235 144204411 -22445885 + B3 SINE B2 24 212 -4 2 1685 632 169 6 0 chrX 144205627 144205805 -22444491 + (TG)n Simple_repeat Simple_repeat 1 179 0 2 1685 349 280 8 25 chrX 144205984 144206105 -22444191 + PB1D9 SINE Alu 2 120 0 2 1685 307 298 24 47 chrX 144206947 144207074 -22443222 - B4 SINE B4 -46 246 123 2 1685 348 392 7 20 chrX 144207160 144207306 -22442990 - RSINE1 SINE B4 -19 146 3 2 1685 225 312 12 0 chrX 144207331 144207411 -22442885 - B4 SINE B4 -207 85 5 2 1685 220 241 16 65 chrX 144208125 144208187 -22442109 + B4 SINE B4 15 73 -219 2 1685 3324 118 2 8 chrX 144208490 144208996 -22441300 - RLTR1C LTR ERV1 0 503 1 2 1685 323 269 128 47 chrX 144209182 144209330 -22440966 + B3 SINE B2 57 216 0 2 1685 954 83 0 62 chrX 144210527 144210719 -22439577 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1685 306 297 8 25 chrX 144210944 144211065 -22439231 + PB1D9 SINE Alu 2 120 0 2 1685 282 351 51 39 chrX 144211855 144212033 -22438263 - B4 SINE B4 -3 289 110 2 1685 299 359 14 27 chrX 144212106 144212252 -22438044 - RSINE1 SINE B4 -19 146 3 2 1685 241 291 13 0 chrX 144212264 144212343 -22437953 - B4 SINE B4 -208 84 5 2 1685 212 173 0 103 chrX 144212357 144212415 -22437881 + A-rich Low_complexity Low_complexity 1 52 0 2 1685 218 406 47 8 chrX 144212876 144213005 -22437291 - ID_B1 SINE B4 -7 217 84 2 1685 235 224 16 65 chrX 144213096 144213158 -22437138 + B4 SINE B4 15 73 -219 2 1685 3533 100 4 4 chrX 144213462 144213964 -22436332 - RLTR1C LTR ERV1 0 503 2 2 1685 551 253 109 29 chrX 144213998 144214173 -22436123 + B3 SINE B2 24 212 -4 2 1685 695 154 6 0 chrX 144215389 144215558 -22434738 + (TG)n Simple_repeat Simple_repeat 1 170 0 2 1685 331 280 8 25 chrX 144215736 144215857 -22434439 + PB1D9 SINE Alu 2 120 0 2 1685 329 311 16 39 chrX 144216698 144216825 -22433471 - B4 SINE B4 -46 246 123 2 1685 311 392 7 20 chrX 144216911 144217057 -22433239 - RSINE1 SINE B4 -19 146 3 2 1685 243 325 12 0 chrX 144217069 144217152 -22433144 - B4 SINE B4 -207 85 2 2 1685 220 241 16 65 chrX 144217862 144217924 -22432372 + B4 SINE B4 15 73 -219 2 1685 3441 108 4 4 chrX 144218228 144218730 -22431566 - RLTR1C LTR ERV1 0 503 2 2 1685 516 271 109 29 chrX 144218764 144218939 -22431357 + B3 SINE B2 24 212 -4 2 1685 494 188 6 0 chrX 144220156 144220316 -22429980 + (TG)n Simple_repeat Simple_repeat 1 161 0 2 1685 358 297 8 25 chrX 144220494 144220615 -22429681 + PB1D9 SINE Alu 2 120 0 2 1685 322 340 25 44 chrX 144221454 144221614 -22428682 - B4 SINE B4 -46 246 90 2 1685 250 355 20 34 chrX 144221667 144221813 -22428483 - RSINE1 SINE B4 -19 146 3 2 1685 243 325 12 0 chrX 144221838 144221921 -22428375 - B4 SINE B4 -207 85 2 2 1685 212 232 17 67 chrX 144222634 144222694 -22427602 + B4 SINE B4 15 71 -221 2 1685 3286 116 4 8 chrX 144223000 144223505 -22426791 - RLTR1C LTR ERV1 0 503 1 2 1685 315 277 128 47 chrX 144223690 144223838 -22426458 + B3 SINE B2 57 216 0 3 1685 382 95 23 23 chrX 144225032 144225118 -22425178 + (TCTG)n Simple_repeat Simple_repeat 1 86 0 3 1685 238 247 13 0 chrX 144225133 144225210 -22425086 + (TG)n Simple_repeat Simple_repeat 1 78 0 3 1685 313 297 8 25 chrX 144225371 144225492 -22424804 + PB1D9 SINE Alu 2 120 0 3 1685 23 0 0 0 chrX 144225617 144225640 -22424656 + AT_rich Low_complexity Low_complexity 1 23 0 3 1685 264 363 51 34 chrX 144226281 144226458 -22423838 - B4 SINE B4 -3 289 110 3 1685 299 359 14 27 chrX 144226531 144226677 -22423619 - RSINE1 SINE B4 -19 146 3 3 1685 251 291 13 0 chrX 144226689 144226768 -22423528 - B4 SINE B4 -208 84 5 3 1685 189 0 0 0 chrX 144226782 144226803 -22423493 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1685 244 207 16 65 chrX 144227525 144227587 -22422709 + B4 SINE B4 15 73 -219 3 1685 3471 110 2 4 chrX 144227891 144228394 -22421902 - RLTR1C LTR ERV1 0 503 2 3 1685 506 259 109 29 chrX 144228429 144228604 -22421692 + B3 SINE B2 24 212 -4 3 1685 476 171 7 0 chrX 144229798 144229938 -22420358 + (TG)n Simple_repeat Simple_repeat 1 141 0 3 1685 345 278 8 25 chrX 144230119 144230237 -22420059 + PB1D9 SINE Alu 5 120 0 3 1685 28 48 0 0 chrX 144230374 144230416 -22419880 + AT_rich Low_complexity Low_complexity 1 42 0 3 1685 383 326 27 44 chrX 144231036 144231219 -22419077 - B4 SINE B4 -3 289 110 3 1685 355 326 20 34 chrX 144231292 144231438 -22418858 - RSINE1 SINE B4 -19 146 3 3 1685 569 122 9 0 chrX 144232619 144232734 -22417562 + (TG)n Simple_repeat Simple_repeat 1 116 0 3 1685 268 336 0 27 chrX 144232960 144233070 -22417226 + PB1D9 SINE Alu 2 108 -12 3 1685 243 0 0 0 chrX 144233073 144233100 -22417196 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1685 251 117 0 48 chrX 144233516 144233579 -22416717 + T-rich Low_complexity Low_complexity 1 60 0 3 1685 180 0 0 0 chrX 144233968 144233988 -22416308 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1685 280 291 128 60 chrX 144234777 144234894 -22415402 + PB1D7 SINE Alu 3 127 0 3 1685 1084 181 33 29 chrX 144235038 144235312 -22414984 + Lx2A1 LINE L1 6733 7007 -1 3 1685 278 288 0 27 chrX 144235363 144235438 -22414858 + tRNA-Ala-GCY_ tRNA tRNA 3 75 0 3 1685 365 244 3 21 chrX 144235438 144235449 -22414847 + ID SINE ID 9 88 -204 3 1685 2206 202 41 35 chrX 144235470 144235982 -22414314 + Lx LINE L1 6134 6648 -6 3 1685 2225 179 12 31 chrX 144235965 144236152 -22414144 + L1_Mm LINE L1 5275 5461 -422 3 1685 1199 126 64 18 chrX 144236152 144236370 -22413926 + L1_Mus3 LINE L1 6407 6634 -4 3 1685 2225 179 12 31 chrX 144236370 144236665 -22413631 + L1_Mm LINE L1 5462 5748 -135 3 1685 1796 149 26 3 chrX 144236658 144237002 -22413294 - L1_Mur2 LINE L1 -576 5301 4950 3 1685 217 279 0 29 chrX 144237364 144237434 -22412862 + (TATG)n Simple_repeat Simple_repeat 3 70 0 3 1685 432 314 13 132 chrX 144237563 144237722 -22412574 - B4A SINE B4 -73 219 85 3 1685 316 331 98 33 chrX 144237722 144237875 -22412421 - RSINE1 SINE B4 0 165 3 3 1685 432 314 13 132 chrX 144237875 144237950 -22412346 - B4A SINE B4 -208 84 14 3 1685 4240 269 49 37 chrX 144238397 144240281 -22410015 - Lx9 LINE L1 -22 7622 5712 3 1685 298 241 0 0 chrX 144240259 144240338 -22409958 - L1_Rod LINE L1 -1525 4322 4244 3 1685 506 277 144 4 chrX 144240587 144240830 -22409466 + Lx8 LINE L1 7196 7472 -1 3 1685 282 286 91 45 chrX 144240855 144240943 -22409353 + B3A SINE B2 25 116 -82 3 1685 489 17 0 0 chrX 144240994 144241052 -22409244 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 1685 406 326 9 36 chrX 144242265 144242405 -22407891 - B1F SINE Alu -1 148 13 3 1685 595 306 61 1 chrX 144242735 144242908 -22407388 + B3A SINE B2 2 188 -28 3 1685 459 35 0 0 chrX 144242908 144242965 -22407331 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1685 591 312 82 10 chrX 144242965 144242985 -22407311 + B3 SINE B2 189 208 -8 3 1685 335 302 201 54 chrX 144243199 144243423 -22406873 + B4A SINE B4 7 263 -29 3 1685 573 15 0 0 chrX 144243462 144243528 -22406768 + (TC)n Simple_repeat Simple_repeat 2 67 0 3 1685 348 43 0 0 chrX 144243530 144243576 -22406720 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1685 203 161 17 35 chrX 144243736 144243794 -22406502 + (GTTTG)n Simple_repeat Simple_repeat 3 59 0 3 1685 269 259 0 0 chrX 144243802 144243860 -22406436 - ID4_ SINE ID -17 66 9 3 1685 393 347 104 0 chrX 144243939 144244083 -22406213 - ID_B1 SINE B4 -64 160 2 3 1685 671 312 57 5 chrX 144245239 144245432 -22404864 + ID_B1 SINE B4 6 208 -16 3 1685 218 200 0 0 chrX 144245746 144245786 -22404510 + GA-rich Low_complexity Low_complexity 3 42 0 3 1685 404 147 0 0 chrX 144246935 144247003 -22403293 - U3 snRNA snRNA -149 68 1 3 1685 288 260 0 0 chrX 144247306 144247383 -22402913 + (TG)n Simple_repeat Simple_repeat 2 78 0 3 1685 586 316 16 5 chrX 144247464 144247658 -22402638 - Lx9 LINE L1 -1067 6577 6382 3 1685 5956 131 27 19 chrX 144247718 144248889 -22401407 - Lx LINE L1 -1 6653 5476 3 1685 841 143 94 0 chrX 144248887 144249110 -22401186 - L1VL2 LINE L1 -444 3470 3219 3 1685 531 112 0 0 chrX 144249110 144249190 -22401106 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 3 1685 6535 99 12 6 chrX 144249680 144250663 -22399633 - L1Md_F2 LINE L1 -1 6581 5593 3 1685 1204 92 0 26 chrX 144250662 144250852 -22399444 - L1Md_A LINE L1 -2898 2985 2801 3 1685 36123 42 9 0 chrX 144250833 144256975 -22393321 - L1Md_A LINE L1 -1 6581 387 3 1685 6413 116 54 22 chrX 144256977 144258742 -22391554 - L1VL2 LINE L1 -1449 2465 649 3 1685 660 215 56 0 chrX 144258742 144258886 -22391410 - L1VL2 LINE L1 -5893 741 590 3 1685 297 289 12 12 chrX 144259267 144259356 -22390940 + B3A SINE B2 1 89 -127 3 1685 241 353 48 62 chrX 144259356 144259412 -22390884 + ID_B1 SINE B4 1 143 -81 3 1685 204 237 143 13 chrX 144259885 144259962 -22390334 + MIR3 SINE MIR 85 171 -37 3 1685 184 356 14 0 chrX 144260672 144260745 -22389551 - MIRb SINE MIR -75 193 120 3 1685 506 306 114 101 chrX 144262002 144262380 -22387916 - MLT1E2 LTR MaLR -29 624 242 3 1685 806 211 0 14 chrX 144262470 144262614 -22387682 - B1_Mus1 SINE Alu 0 148 7 3 1685 555 90 0 0 chrX 144262630 144262708 -22387588 + (GGGA)n Simple_repeat Simple_repeat 3 80 0 3 1685 236 245 0 0 chrX 144262801 144262850 -22387446 + GA-rich Low_complexity Low_complexity 4 52 0 3 1685 644 302 0 0 chrX 144263174 144263336 -22386960 + ID_B1 SINE B4 53 214 -10 3 1685 264 317 48 38 chrX 144263444 144263549 -22386747 - PB1D10 SINE Alu -35 114 9 3 1685 244 337 61 0 chrX 144263602 144263700 -22386596 - B1F SINE Alu -37 112 9 3 1685 264 324 27 0 chrX 144263732 144263806 -22386490 - ID4 SINE ID -4 79 4 3 1685 189 0 0 0 chrX 144264196 144264217 -22386079 + (TTGG)n Simple_repeat Simple_repeat 3 23 0 3 1685 228 86 0 0 chrX 144264220 144264255 -22386041 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3 1685 390 237 67 50 chrX 144264262 144264348 -22385948 - ID_B1 SINE B4 0 224 136 3 1685 3193 56 5 0 chrX 144264348 144264742 -22385554 + MTA_Mm LTR MaLR 1 396 0 3 1685 390 237 67 50 chrX 144264742 144264775 -22385521 - ID_B1 SINE B4 -89 135 103 3 1685 233 250 25 0 chrX 144264823 144264903 -22385393 - L1MB7 LINE L1 -56 6128 6047 3 1685 380 239 17 17 chrX 144265742 144265857 -22384439 + (TCTG)n Simple_repeat Simple_repeat 2 116 0 3 1685 271 357 107 0 chrX 144265881 144265993 -22384303 - B3A SINE B2 -22 176 53 3 1685 306 0 0 0 chrX 144266403 144266437 -22383859 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1685 378 224 45 60 chrX 144267132 144267265 -22383031 - ID_B1 SINE B4 0 224 94 3 1685 258 95 0 0 chrX 144267996 144268038 -22382258 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 3 1685 207 0 0 0 chrX 144268158 144268181 -22382115 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1685 574 108 129 0 chrX 144268235 144268328 -22381968 - BC1_Mm scRNA scRNA -35 117 13 3 1685 225 49 0 0 chrX 144268328 144268369 -22381927 + L1_Mus2 LINE L1 6526 6566 0 3 1685 22 35 0 0 chrX 144268369 144268398 -22381898 + AT_rich Low_complexity Low_complexity 1 29 0 3 1685 546 298 205 17 chrX 144268621 144268909 -22381387 + MTE2a LTR MaLR 1 342 -37 3 1685 305 0 50 0 chrX 144268909 144268949 -22381347 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 3 1685 972 129 0 0 chrX 144268949 144269088 -22381208 - B1_Mus2 SINE Alu -8 139 1 3 1685 231 146 0 0 chrX 144269088 144269129 -22381167 + (T)n Simple_repeat Simple_repeat 1 41 0 3 1685 690 35 0 0 chrX 144269414 144269499 -22380797 + (CCCTG)n Simple_repeat Simple_repeat 2 86 0 3 1685 630 65 0 0 chrX 144269665 144269757 -22380539 + (TTTC)n Simple_repeat Simple_repeat 2 93 0 3 1685 2447 81 14 0 chrX 144269770 144270116 -22380180 - L1_Mus1 LINE L1 -2 6565 6215 3 1685 22116 75 1 0 chrX 144270118 144273219 -22377077 + L1Md_F2 LINE L1 2484 5586 -297 3 1685 7514 59 25 2 chrX 144273219 144274180 -22376116 + L1Md_F2 LINE L1 5587 6569 -13 3 1685 229 214 0 0 chrX 144274401 144274443 -22375853 + B3A SINE B2 4 45 -153 3 1685 2855 113 6 129 chrX 144274474 144274816 -22375480 + RMER17D LTR ERVK 1 330 -559 3 1685 1223 50 0 22 chrX 144274816 144275000 -22375296 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 3 1685 2855 113 6 129 chrX 144275000 144275286 -22375010 + RMER17D LTR ERVK 331 552 -337 3 1685 2781 64 3 3 chrX 144275668 144276027 -22374269 - L1_Mus1 LINE L1 0 6567 6209 3 1685 2166 118 9 9 chrX 144276027 144276370 -22373926 + RMER17D LTR ERVK 547 889 0 3 1685 446 93 58 0 chrX 144276370 144276456 -22373840 - Lx LINE L1 -12 6642 6552 3 1685 408 125 0 0 chrX 144276837 144276901 -22373395 + (CCCA)n Simple_repeat Simple_repeat 3 66 0 3 1685 235 372 51 6 chrX 144276901 144277058 -22373238 - L2a LINE L2 -3 3423 3260 3 1685 423 306 20 0 chrX 144279878 144280025 -22370271 - L1MC1 LINE L1 -163 6170 6021 3 1685 21 89 0 0 chrX 144280740 144280796 -22369500 + AT_rich Low_complexity Low_complexity 1 56 0 3 1685 279 284 0 0 chrX 144281506 144281580 -22368716 + PB1D10 SINE Alu 42 115 -2 3 1685 5662 109 29 3 chrX 144281724 144282761 -22367535 - L1VL2 LINE L1 -1789 2123 1049 4 1685 39181 48 9 0 chrX 144282822 144289265 -22361031 - L1Md_T LINE L1 -2 6580 147 4 1685 4152 117 30 12 chrX 144289264 144289903 -22360393 - L1VL2 LINE L1 -5514 1118 469 4 1685 289 278 33 0 chrX 144289900 144289990 -22360306 - L1MC1 LINE L1 -379 5954 5862 4 1685 363 287 22 37 chrX 144290066 144290200 -22360096 - BC1_Mm scRNA scRNA -18 134 3 4 1685 198 0 0 0 chrX 144290349 144290371 -22359925 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1685 208 133 0 82 chrX 144290397 144290446 -22359850 + A-rich Low_complexity Low_complexity 2 46 0 4 1685 386 240 23 62 chrX 144290525 144290654 -22359642 - L1MCa LINE L1 -5875 633 510 4 1685 361 242 10 40 chrX 144290837 144290936 -22359360 - PB1 SINE Alu -3 124 29 4 1685 610 291 87 19 chrX 144291020 144291286 -22359010 - L1MCa LINE L1 -6220 288 5 4 1685 472 242 89 22 chrX 144291518 144291653 -22358643 - B1F2 SINE Alu 0 149 6 4 1685 302 278 41 0 chrX 144291795 144291892 -22358404 + MER53 DNA hAT 93 193 0 4 1685 193 344 11 32 chrX 144291959 144292052 -22358244 + MER5A DNA MER1_type 1 91 -98 4 1685 426 85 0 0 chrX 144292081 144292140 -22358156 + (TCCC)n Simple_repeat Simple_repeat 4 62 0 4 1685 193 254 0 83 chrX 144292170 144292230 -22358066 - L3 LINE CR1 -3646 843 789 4 1685 363 321 20 41 chrX 144292230 144292376 -22357920 + LTR16A1 LTR ERVL 47 189 -267 4 1685 224 131 0 21 chrX 144292391 144292438 -22357858 + CT-rich Low_complexity Low_complexity 2 47 0 4 1685 1163 213 48 156 chrX 144292641 144292688 -22357608 + ORR1D1 LTR MaLR 1 38 -336 4 1685 1242 55 0 20 chrX 144292688 144292837 -22357459 + B1_Mus1 SINE Alu 3 148 0 4 1685 1163 213 48 156 chrX 144292837 144293206 -22357090 + ORR1D1 LTR MaLR 39 372 -2 4 1685 1891 141 0 45 chrX 144293447 144293760 -22356536 + Lx3B LINE L1 6672 6970 -3 4 1685 22 0 0 0 chrX 144293767 144293789 -22356507 + AT_rich Low_complexity Low_complexity 1 22 0 4 1685 322 279 0 0 chrX 144294050 144294118 -22356178 + B1F SINE Alu 21 88 -61 4 1685 596 213 21 29 chrX 144294248 144294388 -22355908 + B1_Mur3 SINE Alu 5 143 -6 4 1685 430 298 20 66 chrX 144294433 144294584 -22355712 + RSINE1 SINE B4 5 148 -17 4 1685 525 32 0 0 chrX 144294593 144294656 -22355640 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 4 1685 1666 257 65 12 chrX 144294682 144295111 -22355185 - Lx6 LINE L1 -179 7281 6830 4 1685 739 293 40 0 chrX 144295432 144295630 -22354666 - ID_B1 SINE B4 -17 207 2 4 1685 2589 141 17 10 chrX 144295654 144296069 -22354227 + Lx2A LINE L1 6589 7006 -2 4 1685 420 71 0 0 chrX 144296070 144296126 -22354170 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 4 1685 434 236 0 33 chrX 144296156 144296248 -22354048 + B3 SINE B2 48 136 -80 4 1685 246 81 0 0 chrX 144296253 144296290 -22354006 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1685 2020 177 34 13 chrX 144296331 144296709 -22353587 - ORR1B1 LTR MaLR -8 386 1 4 1685 326 266 13 0 chrX 144296714 144296793 -22353503 + B3A SINE B2 60 139 -59 4 1685 343 327 67 97 chrX 144296887 144297270 -22353026 - ORR1E LTR MaLR 0 370 1 4 1685 525 320 0 7 chrX 144297401 144297549 -22352747 + B1F1 SINE Alu 1 147 -2 4 1685 335 298 21 31 chrX 144297687 144297784 -22352512 + B3A SINE B2 1 96 -102 4 1685 311 65 0 21 chrX 144297790 144297837 -22352459 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 1685 23 0 0 0 chrX 144297837 144297860 -22352436 + AT_rich Low_complexity Low_complexity 1 23 0 4 1685 661 350 18 4 chrX 144297896 144298123 -22352173 + B4A SINE B4 2 231 -61 4 1685 589 282 25 19 chrX 144298124 144298283 -22352013 + RSINE1 SINE B4 6 165 0 4 1685 254 207 0 79 chrX 144298323 144298386 -22351910 + B4A SINE B4 235 292 0 4 1685 311 238 12 70 chrX 144298579 144298665 -22351631 - ID4 SINE ID 0 83 3 4 1685 277 295 95 35 chrX 144298680 144298796 -22351500 + MER58B DNA MER1_type 172 294 -47 4 1685 382 336 24 8 chrX 144299209 144299332 -22350964 - B4A SINE B4 -166 126 2 4 1685 284 299 0 16 chrX 144299879 144299975 -22350321 + ID4 SINE ID 9 102 -50 4 1685 799 165 15 8 chrX 144300155 144300289 -22350007 + B1_Mus2 SINE Alu 1 135 -12 4 1685 939 109 0 0 chrX 144300289 144300454 -22349842 + (GA)n Simple_repeat Simple_repeat 2 166 0 4 1685 217 246 0 21 chrX 144300507 144300559 -22349737 + B3 SINE B2 1 51 -147 4 1685 193 326 21 42 chrX 144301065 144301161 -22349135 - MIRb SINE MIR -50 218 125 4 1685 3148 152 52 51 chrX 144301876 144302919 -22347377 + RLTR13D1 LTR ERVK 1 1023 0 4 1685 463 351 19 5 chrX 144303460 144303669 -22346627 - MLT1E2 LTR MaLR -40 587 376 4 1685 413 18 54 0 chrX 144303905 144303961 -22346335 + (TTTTG)n Simple_repeat Simple_repeat 1 59 0 4 1685 814 178 0 0 chrX 144303961 144304090 -22346206 - B1_Mus1 SINE Alu -13 135 7 4 1685 780 11 0 0 chrX 144304109 144304198 -22346098 + (GGAA)n Simple_repeat Simple_repeat 2 90 0 4 1685 256 250 18 0 chrX 144304234 144304290 -22346006 + ID4_ SINE ID 24 80 -3 4 1685 191 80 38 57 chrX 144304290 144304343 -22345953 + GA-rich Low_complexity Low_complexity 1 52 0 4 1685 836 298 19 0 chrX 144304642 144304850 -22345446 + ID_B1 SINE B4 3 214 -10 4 1685 230 262 93 23 chrX 144304975 144305061 -22345235 - B1F2 SINE Alu -49 100 9 4 1685 201 102 19 58 chrX 144305657 144305709 -22344587 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 4 1685 344 296 70 0 chrX 144305709 144305824 -22344472 - ID_B1 SINE B4 0 224 102 4 1685 236 284 105 26 chrX 144306183 144306259 -22344037 + ID4 SINE ID 2 83 0 4 1685 216 352 95 8 chrX 144306259 144306309 -22343987 + ID_B1 SINE B4 2 138 -86 4 1685 266 194 0 31 chrX 144306782 144306846 -22343450 + (TCTCTG)n Simple_repeat Simple_repeat 5 66 0 4 1685 204 182 0 0 chrX 144306856 144306900 -22343396 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 4 1685 263 287 245 0 chrX 144306957 144307051 -22343245 - B3A SINE B2 -80 118 2 4 1685 192 40 0 0 chrX 144307335 144307360 -22342936 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 4 1685 315 105 0 0 chrX 144307628 144307685 -22342611 + (T)n Simple_repeat Simple_repeat 1 57 0 4 1685 272 365 0 13 chrX 144307764 144307839 -22342457 + RSINE1 SINE B4 92 165 0 4 1685 606 83 0 0 chrX 144307897 144307981 -22342315 - BC1_Mm scRNA scRNA -56 96 13 4 1685 264 40 0 39 chrX 144307981 144308033 -22342263 + L1_Mus2 LINE L1 6526 6580 -2 4 1685 587 301 195 17 chrX 144308274 144308566 -22341730 + MTE2a LTR MaLR 1 344 -35 4 1685 190 27 51 51 chrX 144308566 144308605 -22341691 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 4 1685 1044 139 0 0 chrX 144308606 144308750 -22341546 - B1_Mus2 SINE Alu -3 144 1 4 1685 254 281 18 0 chrX 144309066 144309123 -22341173 - PB1D10 SINE Alu -37 80 23 4 1685 363 44 0 0 chrX 144309131 144309176 -22341120 + (CCCTG)n Simple_repeat Simple_repeat 2 46 0 4 1685 657 110 0 0 chrX 144309344 144309444 -22340852 + (TC)n Simple_repeat Simple_repeat 2 101 0 4 1685 4194 69 2 2 chrX 144309459 144309967 -22340329 - L1_Mus1 LINE L1 -2 6565 6058 4 1685 553 274 264 6 chrX 144309971 144310134 -22340162 - ID_B1 SINE B4 -18 206 2 4 1686 26 0 0 0 chrX 144310496 144310522 -22339774 + AT_rich Low_complexity Low_complexity 1 26 0 4 1686 379 247 0 12 chrX 144310640 144310722 -22339574 + MER20 DNA MER1_type 121 201 -18 4 1686 1073 47 18 85 chrX 144311108 144311272 -22339024 - B2_Mm2 SINE B2 -7 188 36 4 1686 240 315 27 0 chrX 144311269 144311342 -22338954 - B4A SINE B4 -217 75 1 4 1686 272 288 39 85 chrX 144311392 144311521 -22338775 - RSINE1 SINE B4 -31 134 12 4 1686 470 289 35 21 chrX 144311516 144311661 -22338635 - ID_B1 SINE B4 -77 147 1 4 1686 235 275 93 53 chrX 144312439 144312589 -22337707 - L1MC LINE L1 -2118 5764 5609 4 1686 264 370 79 0 chrX 144312957 144313084 -22337212 + MER5A DNA MER1_type 8 144 -45 4 1686 339 278 9 72 chrX 144313229 144313360 -22336936 - B3A SINE B2 -5 193 70 4 1686 272 303 109 36 chrX 144313390 144313527 -22336769 - B1F2 SINE Alu -1 148 2 4 1686 696 153 2 10 chrX 144313566 144313698 -22336598 - L1_Mur2 LINE L1 -2202 3944 3778 4 1686 236 239 71 43 chrX 144313933 144314003 -22336293 + ID4_ SINE ID 9 80 -3 4 1686 229 337 133 0 chrX 144314079 144314177 -22336119 + B1F1 SINE Alu 1 111 -38 4 1686 278 264 44 35 chrX 144314240 144314354 -22335942 + PB1D10 SINE Alu 2 116 -1 4 1686 242 95 0 23 chrX 144314732 144314775 -22335521 + (TTG)n Simple_repeat Simple_repeat 3 44 0 4 1686 309 76 45 0 chrX 144315342 144315408 -22334888 + (CAAAAA)n Simple_repeat Simple_repeat 4 72 0 4 1686 314 241 53 53 chrX 144315478 144315592 -22334704 - B4A SINE B4 -173 119 6 4 1686 6165 78 30 21 chrX 144316621 144317425 -22332871 - L1Md_F2 LINE L1 -13 6569 5759 4 1686 2983 118 87 46 chrX 144318187 144318684 -22331612 + MURVY-LTR LTR ERV1 1 517 -2 4 1686 365 304 45 62 chrX 144318736 144318978 -22331318 + MuRRS4-int LTR ERV1 31 268 -7510 4 1686 4329 287 24 35 chrX 144319025 144320784 -22329512 + MuRRS4-int LTR ERV1 343 2336 -5442 4 1686 2780 303 6 11 chrX 144320874 144321752 -22328544 + MuRRS4-int LTR ERV1 2367 3239 -1451 4 1686 213 260 0 20 chrX 144321782 144321833 -22328463 - ID SINE ID -153 71 22 4 1686 354 351 23 41 chrX 144322318 144322490 -22327806 - B4 SINE B4 -14 278 110 4 1686 315 366 14 27 chrX 144322563 144322709 -22327587 - RSINE1 SINE B4 -19 146 3 4 1686 257 294 76 29 chrX 144323331 144323436 -22326860 - ID_B1 SINE B4 -7 217 108 4 1686 265 111 0 0 chrX 144323577 144323613 -22326683 + B4 SINE B4 38 73 -219 4 1686 3532 122 20 2 chrX 144323920 144324414 -22325882 - RLTR1C LTR ERV1 0 503 1 5 1686 442 264 159 0 chrX 144324447 144324610 -22325686 + B3 SINE B2 24 212 -4 5 1686 785 74 8 0 chrX 144325803 144325925 -22324371 + (TG)n Simple_repeat Simple_repeat 1 123 0 5 1686 350 275 0 30 chrX 144326157 144326279 -22324017 + B1_Mm SINE Alu 2 120 0 5 1686 347 291 42 60 chrX 144327096 144327264 -22323032 - B4 SINE B4 -18 274 110 5 1686 403 345 14 27 chrX 144327336 144327482 -22322814 - RSINE1 SINE B4 -19 146 3 5 1686 200 246 18 0 chrX 144327819 144327876 -22322420 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 5 1686 227 194 0 0 chrX 144328315 144328351 -22321945 + B4 SINE B4 38 73 -219 5 1686 3837 99 0 14 chrX 144328655 144329165 -22321131 - RLTR1C LTR ERV1 0 503 1 5 1686 451 294 109 29 chrX 144329199 144329374 -22320922 + B3 SINE B2 24 212 -4 5 1686 225 141 28 14 chrX 144330587 144330623 -22319673 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1686 228 35 0 0 chrX 144330623 144330652 -22319644 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 1686 225 141 28 14 chrX 144330652 144330687 -22319609 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1686 399 263 0 63 chrX 144330913 144331039 -22319257 + PB1D9 SINE Alu 2 119 -1 5 1686 227 333 0 39 chrX 144331928 144332006 -22318290 - B4A SINE B4 -95 197 123 5 1686 276 366 14 27 chrX 144332092 144332238 -22318058 - RSINE1 SINE B4 -19 146 3 5 1686 219 36 0 0 chrX 144332620 144332648 -22317648 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 5 1686 229 394 54 16 chrX 144332850 144332979 -22317317 - ID_B1 SINE B4 -7 217 84 5 1686 256 190 16 65 chrX 144333067 144333129 -22317167 + B4 SINE B4 15 73 -219 5 1686 533 253 109 29 chrX 144333464 144333639 -22316657 + B3 SINE B2 24 212 -4 5 1686 610 123 15 0 chrX 144334845 144334975 -22315321 + (TG)n Simple_repeat Simple_repeat 2 133 0 5 1686 355 274 8 64 chrX 144335203 144335328 -22314968 + PB1D9 SINE Alu 2 119 -1 5 1686 279 357 51 34 chrX 144336118 144336295 -22314001 - B4 SINE B4 -3 289 110 5 1686 440 324 14 27 chrX 144336368 144336514 -22313782 - RSINE1 SINE B4 -19 146 3 5 1686 226 273 15 0 chrX 144336526 144336592 -22313704 - B4 SINE B4 -207 85 19 5 1686 5849 82 4 7 chrX 144337102 144337850 -22312446 + L1Md_F2 LINE L1 5835 6580 -2 5 1686 234 333 79 53 chrX 144338407 144338426 -22311870 + ID SINE ID 49 73 -151 5 1686 349 0 0 0 chrX 144338426 144338466 -22311830 - RLTR1C LTR ERV1 0 503 464 5 1686 331 350 8 16 chrX 144338459 144338581 -22311715 + B1F SINE Alu 29 149 0 5 1686 234 333 79 53 chrX 144338466 144338559 -22311737 + ID_B1 SINE B4 74 204 -20 5 1686 557 276 136 50 chrX 144338624 144338845 -22311451 + Lx5 LINE L1 6480 6719 -331 5 1686 5557 103 14 16 chrX 144339103 144339864 -22310432 - L1_Mus1 LINE L1 -1 6566 5807 5 1686 234 307 0 13 chrX 144339864 144339932 -22310364 - L1MC5 LINE L1 -61 7900 7834 5 1686 2888 113 33 8 chrX 144340126 144340664 -22309632 - L1_Mus3 LINE L1 -684 5954 5407 5 1686 2084 122 7 3 chrX 144340664 144340961 -22309335 + L1_Mus3 LINE L1 6338 6635 -3 5 1686 291 327 18 27 chrX 144341118 144341228 -22309068 - PB1D10 SINE Alu -2 115 7 5 1686 3199 216 71 6 chrX 144341393 144342083 -22308213 - Lx5 LINE L1 0 7050 6316 5 1686 320 326 78 21 chrX 144342111 144342252 -22308044 - MLT1L LTR MaLR -151 459 311 5 1686 373 275 107 8 chrX 144342594 144342715 -22307581 - ID_B1 SINE B4 -91 133 1 5 1686 784 307 12 4 chrX 144342759 144343014 -22307282 - Lx7 LINE L1 -396 7300 7044 5 1686 299 304 32 90 chrX 144343718 144343906 -22306390 + MER5A DNA MER1_type 4 180 -9 5 1686 1172 96 0 0 chrX 144343968 144344114 -22306182 + B1_Mm SINE Alu 2 147 0 5 1686 548 260 32 0 chrX 144344241 144344364 -22305932 + B1F1 SINE Alu 6 132 -17 5 1686 405 0 0 0 chrX 144344373 144344418 -22305878 + (ATTG)n Simple_repeat Simple_repeat 4 48 0 5 1686 665 238 7 7 chrX 144344778 144344922 -22305374 + B1_Mur3 SINE Alu 6 149 0 5 1686 268 352 4 65 chrX 144345004 144345115 -22305181 + PB1D10 SINE Alu 6 118 -2 5 1686 303 336 8 15 chrX 144345141 144345274 -22305022 + L1MC2 LINE L1 6100 6231 -113 5 1686 542 71 141 0 chrX 144345395 144345480 -22304816 - RMER19A LTR ERVK 0 737 641 5 1686 251 130 19 0 chrX 144345513 144345567 -22304729 + (TTAA)n Simple_repeat Simple_repeat 2 56 0 5 1686 37589 31 1 7 chrX 144345579 144350762 -22299534 + L1Md_A LINE L1 441 5586 -297 5 1686 8863 40 0 0 chrX 144350762 144351757 -22298539 + L1Md_A LINE L1 5587 6581 -1 5 1686 3084 41 3 0 chrX 144351821 144352166 -22298130 + ORR1A0 LTR MaLR 1 346 0 5 1686 3771 150 23 2 chrX 144352170 144352778 -22297518 - RMER19A LTR ERVK -116 621 1 5 1686 226 281 16 0 chrX 144352778 144352842 -22297454 + L1MD LINE L1 5518 5582 -777 5 1686 361 289 41 10 chrX 144352842 144352940 -22297356 + B4A SINE B4 1 101 -191 5 1686 485 284 119 39 chrX 144353009 144353371 -22296925 + L1MB8 LINE L1 5742 6133 -41 5 1686 3570 31 5 0 chrX 144353373 144353765 -22296531 - MTA_Mm LTR MaLR 0 396 3 5 1686 300 314 57 28 chrX 144353769 144353910 -22296386 + B1F2 SINE Alu 5 149 0 5 1686 581 270 208 22 chrX 144354273 144354542 -22295754 + Lx8 LINE L1 7121 7439 -34 5 1686 1910 194 25 11 chrX 144354799 144355159 -22295137 - ORR1B2 LTR MaLR -2 365 1 5 1686 360 0 0 0 chrX 144355301 144355341 -22294955 + (A)n Simple_repeat Simple_repeat 1 40 0 5 1686 4022 184 55 82 chrX 144355346 144356273 -22294023 + RMER19B LTR ERVK 1 902 0 5 1686 442 280 15 36 chrX 144357677 144357814 -22292482 - ID_B1 SINE B4 -4 220 87 5 1686 914 311 0 0 chrX 144358396 144358624 -22291672 + MTEa LTR MaLR 24 251 -128 5 1686 661 145 7 101 chrX 144358686 144358824 -22291472 - URR1B DNA MER1_type -100 125 1 5 1686 234 360 22 0 chrX 144358826 144358915 -22291381 + MTEa LTR MaLR 283 373 -6 5 1686 686 165 91 6 chrX 144359299 144359464 -22290832 + Lx9 LINE L1 7464 7642 -2 5 1686 821 260 50 10 chrX 144359705 144359907 -22290389 + B3 SINE B2 1 210 -6 5 1686 356 313 73 15 chrX 144359946 144360082 -22290214 + ID_B1 SINE B4 73 216 -8 5 1686 279 140 0 0 chrX 144360096 144360146 -22290150 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1686 411 38 0 0 chrX 144360257 144360310 -22289986 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1686 310 288 0 59 chrX 144360904 144360989 -22289307 + ID4_ SINE ID 2 81 -2 5 1686 812 206 7 0 chrX 144361036 144361177 -22289119 + B1_Mur4 SINE Alu 2 143 -7 5 1686 223 344 56 0 chrX 144361240 144361330 -22288966 - B1F SINE Alu -50 99 5 5 1686 269 258 262 6 chrX 144361436 144361596 -22288700 + Charlie2b DNA MER1_type 121 321 -2461 5 1686 326 305 57 29 chrX 144361636 144361882 -22288414 + Charlie2b DNA MER1_type 1814 2066 -716 5 1686 9222 26 0 0 chrX 144363060 144364135 -22286161 - L1_Mm LINE L1 -1630 4253 3179 5 1686 4394 93 10 2 chrX 144364135 144364717 -22285579 + L1_Mus3 LINE L1 6047 6633 -5 5 1686 32988 79 2 3 chrX 144364725 144369961 -22280335 + L1Md_F2 LINE L1 266 5589 -297 5 1686 8491 52 3 2 chrX 144369961 144370954 -22279342 + L1Md_F2 LINE L1 5590 6583 -2 5 1686 222 214 0 0 chrX 144371155 144371197 -22279099 + B3A SINE B2 4 45 -153 5 1686 3078 118 35 20 chrX 144371223 144371562 -22278734 + RMER17D LTR ERVK 1 346 -543 5 1686 996 114 0 0 chrX 144371562 144371720 -22278576 + (TCTCC)n Simple_repeat Simple_repeat 1 158 0 5 1686 3078 118 35 20 chrX 144371720 144371924 -22278372 + RMER17D LTR ERVK 347 552 -337 5 1686 2920 78 0 3 chrX 144372296 144372656 -22277640 - L1_Mus1 LINE L1 0 6567 6209 5 1686 2163 129 9 9 chrX 144372656 144372999 -22277297 + RMER17D LTR ERVK 547 889 0 5 1686 522 115 0 0 chrX 144372999 144373086 -22277210 - Lx LINE L1 -12 6642 6556 5 1686 447 137 0 0 chrX 144373469 144373542 -22276754 + (CCCA)n Simple_repeat Simple_repeat 3 75 0 5 1686 192 374 57 6 chrX 144373542 144373701 -22276595 - L2a LINE L2 0 3426 3260 5 1686 423 306 20 0 chrX 144376643 144376790 -22273506 - L1MC1 LINE L1 -163 6170 6021 5 1686 21 89 0 0 chrX 144377504 144377560 -22272736 + AT_rich Low_complexity Low_complexity 1 56 0 5 1686 188 35 35 0 chrX 144377593 144377622 -22272674 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 5 1686 279 284 0 0 chrX 144378271 144378345 -22271951 + PB1D10 SINE Alu 42 115 -2 5 1686 5704 105 32 4 chrX 144378489 144380092 -22270204 - L1VL2 LINE L1 -1789 1826 177 5 1686 228 306 28 0 chrX 144380097 144380169 -22270127 - L1MC1 LINE L1 -1831 5954 5881 5 1686 210 160 0 0 chrX 144380260 144380310 -22269986 + T-rich Low_complexity Low_complexity 1 50 0 5 1686 294 329 0 0 chrX 144380314 144380393 -22269903 - ID4_ SINE ID -2 81 3 5 1686 224 111 0 82 chrX 144380584 144380633 -22269663 + A-rich Low_complexity Low_complexity 2 46 0 5 1686 389 246 23 62 chrX 144380711 144380841 -22269455 - L1MCa LINE L1 -5874 634 510 5 1686 312 274 10 40 chrX 144381024 144381123 -22269173 - PB1 SINE Alu -3 124 29 5 1686 575 299 87 19 chrX 144381207 144381473 -22268823 - L1MCa LINE L1 -6220 288 5 5 1686 468 225 106 23 chrX 144381701 144381833 -22268463 - B1F2 SINE Alu -1 148 6 5 1686 353 252 40 0 chrX 144381973 144382072 -22268224 + MER53 DNA hAT 91 193 0 5 1686 186 344 11 32 chrX 144382139 144382232 -22268064 + MER5A DNA MER1_type 1 91 -98 5 1686 726 44 0 0 chrX 144382259 144382349 -22267947 + (TCCC)n Simple_repeat Simple_repeat 3 92 0 5 1686 365 102 0 17 chrX 144382391 144382451 -22267845 + (TCCC)n Simple_repeat Simple_repeat 4 62 0 5 1686 366 329 20 41 chrX 144382541 144382687 -22267609 + LTR16A1 LTR ERVL 47 189 -267 5 1686 186 103 0 0 chrX 144382702 144382731 -22267565 + (TCTCCC)n Simple_repeat Simple_repeat 1 29 0 5 1686 1166 238 84 71 chrX 144382951 144382998 -22267298 + ORR1D1 LTR MaLR 1 46 -328 5 1686 1207 58 0 0 chrX 144382998 144383136 -22267160 + B1_Mus1 SINE Alu 3 140 -8 5 1686 190 29 88 0 chrX 144383137 144383171 -22267125 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 5 1686 1166 238 84 71 chrX 144383171 144383364 -22266932 + ORR1D1 LTR MaLR 47 231 -143 5 1686 186 71 0 0 chrX 144383364 144383392 -22266904 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 5 1686 1166 238 84 71 chrX 144383392 144383515 -22266781 + ORR1D1 LTR MaLR 232 371 -3 5 1686 1907 137 0 45 chrX 144383755 144384068 -22266228 + Lx3B LINE L1 6672 6970 -3 6 1686 21 0 0 0 chrX 144384075 144384096 -22266200 + AT_rich Low_complexity Low_complexity 1 21 0 6 1686 324 279 0 0 chrX 144384357 144384425 -22265871 + B1F SINE Alu 21 88 -61 6 1686 666 199 21 35 chrX 144384554 144384695 -22265601 + B1_Mur3 SINE Alu 5 143 -6 6 1686 422 298 20 66 chrX 144384740 144384891 -22265405 + RSINE1 SINE B4 5 148 -17 6 1686 441 0 0 0 chrX 144384902 144384951 -22265345 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 6 1686 1613 262 65 12 chrX 144384977 144385406 -22264890 - Lx6 LINE L1 -179 7281 6830 6 1686 817 281 39 0 chrX 144385722 144385925 -22264371 - ID_B1 SINE B4 -12 212 2 6 1686 2588 144 17 7 chrX 144385975 144386382 -22263914 + Lx2A LINE L1 6589 6999 -9 6 1686 288 77 0 0 chrX 144386382 144386421 -22263875 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1686 420 236 0 33 chrX 144386452 144386544 -22263752 + B3 SINE B2 48 136 -80 6 1686 228 86 0 0 chrX 144386549 144386584 -22263712 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1686 1989 177 35 13 chrX 144386625 144386998 -22263298 - ORR1B1 LTR MaLR -8 386 6 6 1686 430 248 39 70 chrX 144387007 144387163 -22263133 + B3 SINE B2 59 209 -7 6 1686 202 91 67 22 chrX 144388149 144388194 -22262102 + A-rich Low_complexity Low_complexity 3 49 0 6 1686 260 184 102 0 chrX 144388323 144388372 -22261924 - ID_B1 SINE B4 -17 207 154 6 1686 270 330 30 40 chrX 144388545 144388646 -22261650 + PB1D7 SINE Alu 19 118 -2 6 1686 446 252 210 8 chrX 144388650 144388774 -22261522 + B3 SINE B2 3 151 -65 6 1686 5904 20 0 0 chrX 144388915 144389628 -22260668 - L1_Mm LINE L1 -195 5688 4976 6 1686 1178 34 0 0 chrX 144389629 144389776 -22260520 + L1Md_A LINE L1 6436 6582 0 6 1686 654 133 0 0 chrX 144389962 144390075 -22260221 + (TCTA)n Simple_repeat Simple_repeat 1 113 0 6 1686 785 252 19 15 chrX 144390089 144390294 -22260002 - ID_B1 SINE B4 -17 207 2 6 1686 332 335 62 92 chrX 144390500 144390883 -22259413 - ORR1E LTR MaLR 0 370 1 6 1686 545 326 0 7 chrX 144391014 144391162 -22259134 + B1F1 SINE Alu 1 147 -2 6 1686 374 295 18 37 chrX 144391300 144391409 -22258887 + B3A SINE B2 1 107 -91 6 1686 194 91 0 29 chrX 144391409 144391443 -22258853 + (TA)n Simple_repeat Simple_repeat 1 33 0 6 1686 23 0 0 0 chrX 144391443 144391466 -22258830 + AT_rich Low_complexity Low_complexity 1 23 0 6 1686 688 350 18 4 chrX 144391502 144391729 -22258567 + B4A SINE B4 2 231 -61 6 1686 574 301 13 19 chrX 144391730 144391889 -22258407 + RSINE1 SINE B4 6 163 -2 6 1686 253 207 0 79 chrX 144391929 144391992 -22258304 + B4A SINE B4 235 292 0 6 1686 276 238 12 70 chrX 144392185 144392271 -22258025 - ID4 SINE ID 0 83 3 6 1686 286 295 95 35 chrX 144392286 144392402 -22257894 + MER58B DNA MER1_type 172 294 -47 6 1686 375 344 24 8 chrX 144392814 144392937 -22257359 - B4A SINE B4 -166 126 2 6 1686 290 301 0 16 chrX 144393484 144393581 -22256715 + ID4 SINE ID 9 103 -49 6 1686 746 165 15 8 chrX 144393761 144393895 -22256401 + B1_Mus2 SINE Alu 1 135 -12 6 1686 768 121 0 0 chrX 144393895 144394036 -22256260 + (GA)n Simple_repeat Simple_repeat 2 142 0 6 1686 215 246 0 21 chrX 144394089 144394141 -22256155 + B2_Mm2 SINE B2 1 51 -147 6 1686 208 326 21 42 chrX 144394647 144394743 -22255553 - MIRb SINE MIR -50 218 125 6 1686 3166 132 73 22 chrX 144395458 144396497 -22253799 + RLTR13D1 LTR ERVK 1 788 -18 6 1686 486 343 28 5 chrX 144397033 144397250 -22253046 - MLT1E2 LTR MaLR -30 597 376 6 1686 233 28 83 0 chrX 144397486 144397522 -22252774 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 6 1686 851 176 0 14 chrX 144397522 144397666 -22252630 - B1_Mus1 SINE Alu 0 148 7 6 1686 549 0 0 0 chrX 144397685 144397746 -22252550 + (GGAA)n Simple_repeat Simple_repeat 2 62 0 6 1686 246 268 18 0 chrX 144397782 144397838 -22252458 + ID4_ SINE ID 24 80 -3 6 1686 260 250 0 0 chrX 144397838 144397890 -22252406 + polypurine Low_complexity Low_complexity 1 52 0 6 1686 737 303 19 0 chrX 144398190 144398398 -22251898 + ID_B1 SINE B4 3 214 -10 6 1686 241 268 90 31 chrX 144398504 144398609 -22251687 - B1F2 SINE Alu -35 114 9 6 1686 226 82 19 58 chrX 144399202 144399254 -22251042 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 6 1686 353 296 70 0 chrX 144399254 144399369 -22250927 - ID_B1 SINE B4 0 224 102 6 1686 300 302 77 126 chrX 144399381 144399627 -22250669 - L1MB8 LINE L1 -9 6169 5936 6 1686 236 352 95 8 chrX 144399728 144399854 -22250442 + ID_B1 SINE B4 2 138 -86 6 1686 266 194 0 31 chrX 144400327 144400391 -22249905 + (TCTCTG)n Simple_repeat Simple_repeat 5 66 0 6 1686 204 182 0 0 chrX 144400401 144400445 -22249851 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 6 1686 259 287 245 0 chrX 144400502 144400596 -22249700 - B3A SINE B2 -80 118 2 6 1686 192 40 0 0 chrX 144400880 144400905 -22249391 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 6 1686 261 378 0 13 chrX 144401278 144401353 -22248943 + RSINE1 SINE B4 92 165 0 6 1686 610 83 0 0 chrX 144401411 144401495 -22248801 - BC1_Mm scRNA scRNA -56 96 13 6 1686 241 40 0 39 chrX 144401495 144401547 -22248749 + L1_Mus2 LINE L1 6526 6580 -2 6 1686 590 301 195 17 chrX 144401788 144402080 -22248216 + MTE2a LTR MaLR 1 344 -35 6 1686 190 27 51 51 chrX 144402080 144402119 -22248177 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 6 1686 980 139 0 0 chrX 144402120 144402264 -22248032 - B1_Mus2 SINE Alu -3 144 1 6 1686 220 316 18 0 chrX 144402580 144402637 -22247659 - PB1D10 SINE Alu -37 80 23 6 1686 318 50 0 0 chrX 144402645 144402685 -22247611 + (CCCTG)n Simple_repeat Simple_repeat 2 41 0 6 1686 567 122 0 0 chrX 144402854 144402944 -22247352 + (TC)n Simple_repeat Simple_repeat 2 91 0 6 1686 552 250 37 15 chrX 144402948 144402961 -22247335 - ID_B1 SINE B4 0 224 207 6 1686 3887 75 2 2 chrX 144402961 144403472 -22246824 - L1_Mus1 LINE L1 -2 6565 6055 6 1686 552 249 290 10 chrX 144403472 144403635 -22246661 - ID_B1 SINE B4 -18 206 2 6 1686 26 0 0 0 chrX 144403997 144404023 -22246273 + AT_rich Low_complexity Low_complexity 1 26 0 6 1686 346 262 0 12 chrX 144404141 144404222 -22246074 + MER20 DNA MER1_type 121 200 -19 6 1686 1072 47 18 85 chrX 144404609 144404773 -22245523 - B2_Mm2 SINE B2 -7 188 36 6 1686 243 315 27 0 chrX 144404770 144404843 -22245453 - B4A SINE B4 -217 75 1 6 1686 259 289 35 105 chrX 144404893 144405036 -22245260 - RSINE1 SINE B4 -31 134 2 6 1686 491 275 35 21 chrX 144405036 144405162 -22245134 - ID_B1 SINE B4 -96 128 1 6 1686 267 378 79 0 chrX 144406458 144406585 -22243711 + MER5A DNA MER1_type 8 144 -45 6 1686 349 280 21 81 chrX 144406702 144406861 -22243435 - B3A SINE B2 -2 214 70 6 1686 284 297 153 23 chrX 144406896 144407027 -22243269 - B1F2 SINE Alu 0 149 2 6 1686 657 148 3 3 chrX 144407064 144407196 -22243100 - L1_Mur2 LINE L1 -2202 3944 3778 6 1686 233 239 71 43 chrX 144407431 144407501 -22242795 + ID4_ SINE ID 9 80 -3 6 1686 234 337 133 0 chrX 144407577 144407675 -22242621 + B1F1 SINE Alu 1 111 -38 6 1686 228 266 52 31 chrX 144407738 144407835 -22242461 + PB1D10 SINE Alu 2 100 -17 6 1686 242 95 0 23 chrX 144408235 144408278 -22242018 + (TTG)n Simple_repeat Simple_repeat 3 44 0 6 1686 309 76 45 0 chrX 144408845 144408911 -22241385 + (CAAAAA)n Simple_repeat Simple_repeat 4 72 0 6 1686 308 241 53 53 chrX 144408981 144409095 -22241201 - B4A SINE B4 -173 119 6 6 1686 5757 78 28 21 chrX 144410124 144410924 -22239372 - L1Md_F2 LINE L1 -13 6569 5765 6 1686 2761 118 87 46 chrX 144411690 144412187 -22238109 + MURVY-LTR LTR ERV1 1 517 -2 6 1686 295 304 45 62 chrX 144412239 144412481 -22237815 + MuRRS4-int LTR ERV1 31 268 -7510 6 1686 3769 288 24 35 chrX 144412537 144414287 -22236009 + MuRRS4-int LTR ERV1 350 2336 -5442 6 1686 2463 303 6 11 chrX 144414377 144415255 -22235041 + MuRRS4-int LTR ERV1 2367 3239 -1451 6 1686 218 260 0 20 chrX 144415285 144415336 -22234960 - ID SINE ID -153 71 22 6 1686 353 358 22 39 chrX 144415813 144415993 -22234303 - B4 SINE B4 -6 286 110 6 1686 272 366 14 27 chrX 144416066 144416212 -22234084 - RSINE1 SINE B4 -19 146 3 6 1686 264 294 76 29 chrX 144416834 144416939 -22233357 - ID_B1 SINE B4 -7 217 108 6 1686 265 111 0 0 chrX 144417080 144417116 -22233180 + B4 SINE B4 38 73 -219 6 1686 3279 122 20 2 chrX 144417423 144417917 -22232379 - RLTR1C LTR ERV1 0 503 1 6 1686 452 270 159 0 chrX 144417950 144418113 -22232183 + B3 SINE B2 24 212 -4 6 1686 785 74 8 0 chrX 144419306 144419428 -22230868 + (TG)n Simple_repeat Simple_repeat 1 123 0 6 1686 343 294 0 13 chrX 144419660 144419782 -22230514 + B1_Mur3 SINE Alu 2 120 0 6 1686 345 319 30 48 chrX 144420599 144420767 -22229529 - B4 SINE B4 -18 274 110 6 1686 359 345 14 27 chrX 144420839 144420985 -22229311 - RSINE1 SINE B4 -19 146 3 6 1686 200 246 18 0 chrX 144421322 144421379 -22228917 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 6 1686 227 194 0 0 chrX 144421818 144421854 -22228442 + B4 SINE B4 38 73 -219 6 1686 3573 99 0 14 chrX 144422158 144422668 -22227628 - RLTR1C LTR ERV1 0 503 1 6 1686 461 294 109 29 chrX 144422702 144422877 -22227419 + B3 SINE B2 24 212 -4 6 1686 243 137 27 14 chrX 144424090 144424132 -22226164 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1686 246 32 0 0 chrX 144424132 144424163 -22226133 + (TC)n Simple_repeat Simple_repeat 2 32 0 7 1686 243 137 27 14 chrX 144424163 144424194 -22226102 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 1686 335 271 0 63 chrX 144424420 144424546 -22225750 + PB1D9 SINE Alu 2 119 -1 7 1686 357 360 29 43 chrX 144425342 144425551 -22224745 - B4 SINE B4 0 292 87 7 1686 339 380 14 27 chrX 144425601 144425747 -22224549 - RSINE1 SINE B4 -19 146 3 7 1686 243 325 12 0 chrX 144425759 144425842 -22224454 - B4 SINE B4 -207 85 2 7 1686 219 259 0 0 chrX 144426083 144426141 -22224155 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 7 1686 1625 132 1 12 chrX 144426919 144427202 -22223094 - RLTR1C LTR ERV1 -16 589 258 7 1686 375 113 0 0 chrX 144428370 144428441 -22221855 + (TG)n Simple_repeat Simple_repeat 2 72 0 7 1686 213 260 13 0 chrX 144428459 144428536 -22221760 + (TG)n Simple_repeat Simple_repeat 1 78 0 7 1686 323 288 8 25 chrX 144428697 144428818 -22221478 + PB1D9 SINE Alu 2 120 0 7 1686 284 357 51 34 chrX 144429608 144429785 -22220511 - B4 SINE B4 -3 289 110 7 1686 338 399 6 19 chrX 144429848 144430004 -22220292 - RSINE1 SINE B4 -9 156 3 7 1686 227 282 14 0 chrX 144430024 144430095 -22220201 - B4 SINE B4 -216 76 5 7 1686 203 176 0 105 chrX 144430109 144430166 -22220130 + A-rich Low_complexity Low_complexity 1 51 0 7 1686 247 304 76 29 chrX 144430629 144430734 -22219562 - ID_B1 SINE B4 -7 217 108 7 1686 237 182 23 0 chrX 144430866 144430910 -22219386 + B4 SINE B4 29 73 -219 7 1686 3581 104 4 6 chrX 144431214 144431717 -22218579 - RLTR1C LTR ERV1 0 503 2 7 1686 515 235 123 32 chrX 144431751 144431905 -22218391 + B3 SINE B2 24 191 -25 7 1686 451 181 6 6 chrX 144433119 144433275 -22217021 + (TG)n Simple_repeat Simple_repeat 1 156 0 7 1686 339 280 8 25 chrX 144433454 144433575 -22216721 + PB1D9 SINE Alu 2 120 0 7 1686 29 47 0 0 chrX 144433711 144433754 -22216542 + AT_rich Low_complexity Low_complexity 1 43 0 7 1686 214 312 31 0 chrX 144433836 144433900 -22216396 - ID4_ SINE ID -13 70 5 7 1686 326 347 22 38 chrX 144434373 144434556 -22215740 - B4 SINE B4 -3 289 110 7 1686 402 314 28 35 chrX 144434629 144434774 -22215522 - RSINE1 SINE B4 -19 146 3 7 1686 521 126 9 0 chrX 144435941 144436052 -22214244 + (TG)n Simple_repeat Simple_repeat 1 112 0 7 1686 253 336 0 27 chrX 144436278 144436388 -22213908 + PB1D9 SINE Alu 2 108 -12 7 1686 243 0 0 0 chrX 144436391 144436418 -22213878 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1686 242 210 0 0 chrX 144436835 144436897 -22213399 + T-rich Low_complexity Low_complexity 1 62 0 7 1686 288 282 128 60 chrX 144438092 144438209 -22212087 + PB1D7 SINE Alu 3 127 0 7 1686 1012 185 28 20 chrX 144438357 144438611 -22211685 + Lx2B LINE L1 6739 6994 -6 7 1686 287 274 0 27 chrX 144438683 144438758 -22211538 + tRNA-Ala-GCY_ tRNA tRNA 3 75 0 7 1686 373 229 3 21 chrX 144438758 144438769 -22211527 + ID SINE ID 9 88 -204 7 1686 2020 218 45 35 chrX 144438790 144439300 -22210996 + Lx LINE L1 6134 6648 -6 7 1686 2257 175 12 31 chrX 144439283 144439470 -22210826 + L1_Mm LINE L1 5275 5461 -422 7 1686 1121 140 64 18 chrX 144439470 144439688 -22210608 + L1_Mus3 LINE L1 6407 6634 -4 7 1686 2257 175 12 31 chrX 144439688 144439983 -22210313 + L1_Mm LINE L1 5462 5748 -135 7 1686 1769 152 26 3 chrX 144439976 144440320 -22209976 - L1_Mur2 LINE L1 -576 5301 4950 7 1686 217 279 0 29 chrX 144440682 144440752 -22209544 + (TATG)n Simple_repeat Simple_repeat 3 70 0 7 1686 432 314 13 132 chrX 144440881 144441040 -22209256 - B4A SINE B4 -73 219 85 7 1686 334 324 98 33 chrX 144441040 144441193 -22209103 - RSINE1 SINE B4 0 165 3 7 1686 432 314 13 132 chrX 144441193 144441268 -22209028 - B4A SINE B4 -208 84 14 7 1687 3637 254 33 28 chrX 144441715 144443002 -22207294 - Lx9 LINE L1 -22 7622 6184 7 1687 1173 106 0 0 chrX 144443002 144443182 -22207114 + (TA)n Simple_repeat Simple_repeat 1 180 0 7 1687 776 275 37 70 chrX 144443182 144443661 -22206635 - Lx9 LINE L1 -1290 6183 5715 7 1687 315 228 0 0 chrX 144443639 144443718 -22206578 - L1_Rod LINE L1 -1525 4322 4244 7 1687 522 273 146 4 chrX 144443967 144444206 -22206090 + Lx8 LINE L1 7196 7468 -5 7 1687 282 286 91 45 chrX 144444235 144444323 -22205973 + B3A SINE B2 25 116 -82 7 1687 486 0 0 0 chrX 144444374 144444428 -22205868 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1687 344 344 8 39 chrX 144445642 144445769 -22204527 - B1F SINE Alu -1 148 26 7 1687 590 300 61 1 chrX 144446113 144446286 -22204010 + B3A SINE B2 2 188 -28 7 1687 495 33 0 0 chrX 144446286 144446347 -22203949 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1687 586 307 82 10 chrX 144446347 144446367 -22203929 + B3 SINE B2 189 208 -8 7 1687 348 318 142 69 chrX 144446572 144446805 -22203491 + B4A SINE B4 14 263 -29 7 1687 591 15 0 0 chrX 144446844 144446912 -22203384 + (TC)n Simple_repeat Simple_repeat 2 69 0 7 1687 294 50 0 0 chrX 144446914 144446954 -22203342 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 1687 207 135 37 37 chrX 144447118 144447172 -22203124 + T-rich Low_complexity Low_complexity 3 56 0 7 1687 395 342 125 0 chrX 144447309 144447461 -22202835 - ID_B1 SINE B4 -52 172 2 7 1687 216 289 0 0 chrX 144448009 144448061 -22202235 - ID4_ SINE ID -26 57 6 7 1687 661 318 57 5 chrX 144448618 144448811 -22201485 + ID_B1 SINE B4 6 208 -16 7 1687 218 200 0 0 chrX 144449125 144449165 -22201131 + GA-rich Low_complexity Low_complexity 3 42 0 7 1687 404 147 0 0 chrX 144450314 144450382 -22199914 - U3 snRNA snRNA -149 68 1 7 1687 274 273 0 0 chrX 144450685 144450762 -22199534 + (TG)n Simple_repeat Simple_repeat 2 78 0 7 1687 604 323 34 24 chrX 144450843 144451135 -22199161 - Lx9 LINE L1 -1067 6577 6283 7 1687 5958 133 27 17 chrX 144451135 144452304 -22197992 - Lx LINE L1 -1 6653 5476 7 1687 850 112 90 0 chrX 144452302 144452480 -22197816 - L1VL2 LINE L1 -444 3171 2978 7 1687 1077 116 0 0 chrX 144452483 144452647 -22197649 + (TTTC)n Simple_repeat Simple_repeat 2 165 0 7 1687 6508 100 12 3 chrX 144453136 144454116 -22196180 - L1Md_F2 LINE L1 -1 6581 5593 7 1687 11843 83 19 1 chrX 144454115 144456667 -22193629 - L1Md_F LINE L1 -2898 2985 387 7 1687 6425 116 53 26 chrX 144456669 144458442 -22191854 - L1VL2 LINE L1 -1449 2166 350 7 1687 672 215 56 0 chrX 144458442 144458586 -22191710 - L1VL2 LINE L1 -5893 442 291 7 1687 308 284 12 12 chrX 144458967 144459049 -22191247 + B3A SINE B2 1 82 -116 7 1687 219 360 48 62 chrX 144459049 144459112 -22191184 + ID_B1 SINE B4 1 143 -81 7 1687 183 250 143 13 chrX 144459584 144459661 -22190635 + MIR3 SINE MIR 85 171 -37 7 1687 184 356 14 0 chrX 144460371 144460444 -22189852 - MIRb SINE MIR -75 193 120 7 1687 473 341 29 0 chrX 144461699 144461904 -22188392 - MLT1E2 LTR MaLR -30 597 387 7 1687 818 204 0 14 chrX 144462167 144462311 -22187985 - B1_Mus1 SINE Alu 0 148 7 7 1687 498 75 0 0 chrX 144462329 144462396 -22187900 + (GGGA)n Simple_repeat Simple_repeat 2 68 0 7 1687 258 245 0 0 chrX 144462486 144462539 -22187757 + GA-rich Low_complexity Low_complexity 4 56 0 7 1687 719 316 29 0 chrX 144462826 144463032 -22187264 + ID_B1 SINE B4 3 214 -10 7 1687 264 317 48 38 chrX 144463138 144463243 -22187053 - PB1D10 SINE Alu -35 114 9 7 1687 253 324 27 0 chrX 144463427 144463501 -22186795 - ID4 SINE ID -4 79 4 7 1687 311 60 0 20 chrX 144463880 144463931 -22186365 + (TTGG)n Simple_repeat Simple_repeat 3 52 0 7 1687 243 61 0 0 chrX 144463934 144463967 -22186329 + (TTG)n Simple_repeat Simple_repeat 1 33 0 7 1687 373 248 67 50 chrX 144463967 144464052 -22186244 - ID_B1 SINE B4 -1 223 136 7 1687 3139 68 2 0 chrX 144464052 144464447 -22185849 + MTA_Mm LTR MaLR 1 396 0 7 1687 373 248 67 50 chrX 144464447 144464480 -22185816 - ID_B1 SINE B4 -89 135 103 7 1687 233 250 25 0 chrX 144464528 144464608 -22185688 - L1MB7 LINE L1 -56 6128 6047 7 1687 185 273 0 22 chrX 144465368 144465413 -22184883 - L3 LINE CR1 -2290 2199 2156 7 1687 321 266 18 18 chrX 144465440 144465551 -22184745 + (TCTG)n Simple_repeat Simple_repeat 2 112 0 7 1687 269 348 107 0 chrX 144465575 144465687 -22184609 - B3A SINE B2 -22 176 53 7 1687 411 56 0 0 chrX 144466098 144466152 -22184144 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 1687 428 214 45 60 chrX 144466847 144466981 -22183315 - ID_B1 SINE B4 0 224 93 7 1687 333 0 0 0 chrX 144467728 144467765 -22182531 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 7 1687 483 87 0 0 chrX 144467883 144467952 -22182344 + (CA)n Simple_repeat Simple_repeat 2 70 0 7 1687 594 91 117 39 chrX 144467982 144468085 -22182211 - BC1_Mm scRNA scRNA -29 123 13 7 1687 225 49 0 0 chrX 144468085 144468126 -22182170 + L1_Mus2 LINE L1 6526 6566 0 7 1687 29 0 0 0 chrX 144468126 144468155 -22182141 + AT_rich Low_complexity Low_complexity 1 29 0 7 1687 606 300 185 10 chrX 144468378 144468669 -22181627 + MTE2a LTR MaLR 1 342 -37 7 1687 341 0 45 0 chrX 144468669 144468713 -22181583 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 7 1687 923 140 0 0 chrX 144468713 144468849 -22181447 - B1_Mus2 SINE Alu -11 136 1 7 1687 322 239 34 68 chrX 144468746 144468863 -22181433 - RLTR25B LTR ERVK -526 502 390 7 1687 234 91 0 0 chrX 144468863 144468896 -22181400 + (T)n Simple_repeat Simple_repeat 1 33 0 7 1687 1319 67 6 0 chrX 144469376 144469555 -22180741 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 1687 3674 81 10 4 chrX 144469562 144470070 -22180226 - L1_Mus1 LINE L1 -2 6565 6055 7 1687 570 243 0 14 chrX 144470070 144470234 -22180062 - ID_B1 SINE B4 -18 206 2 7 1687 34 24 0 0 chrX 144470575 144470616 -22179680 + AT_rich Low_complexity Low_complexity 1 41 0 7 1687 244 300 25 12 chrX 144470740 144470821 -22179475 + MER20 DNA MER1_type 121 202 -17 7 1687 902 126 49 120 chrX 144471203 144471424 -22178872 - B2_Mm2 SINE B2 -7 188 1 7 1687 295 288 39 85 chrX 144471474 144471603 -22178693 - RSINE1 SINE B4 -31 134 12 7 1687 484 277 41 28 chrX 144471598 144471743 -22178553 - ID_B1 SINE B4 -77 147 1 8 1687 291 295 134 70 chrX 144472997 144473139 -22177157 + MER5A DNA MER1_type 8 158 -31 8 1687 357 272 9 81 chrX 144473260 144473392 -22176904 - B3A SINE B2 -5 193 70 8 1687 307 303 109 36 chrX 144473422 144473559 -22176737 - B1F2 SINE Alu -1 148 2 8 1687 534 126 53 0 chrX 144473627 144473722 -22176574 - L1_Mur2 LINE L1 -2000 3877 3778 8 1687 235 286 24 94 chrX 144473730 144473815 -22176481 - ID4 SINE ID -2 81 3 8 1687 279 288 14 0 chrX 144473959 144474032 -22176264 + ID4_ SINE ID 7 80 -3 8 1687 424 282 81 0 chrX 144474107 144474231 -22176065 + ID_B1 SINE B4 81 214 -10 8 1687 303 268 26 18 chrX 144474270 144474384 -22175912 + PB1D10 SINE Alu 2 116 -1 8 1687 405 39 0 0 chrX 144474396 144474447 -22175849 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1687 250 217 33 16 chrX 144474848 144474909 -22175387 + BC1_Mm scRNA scRNA 22 83 -69 8 1687 284 0 28 0 chrX 144475429 144475465 -22174831 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 8 1687 316 231 53 53 chrX 144475532 144475646 -22174650 - B4A SINE B4 -173 119 6 8 1687 233 67 0 0 chrX 144476029 144476059 -22174237 - L1_Mus1 LINE L1 -680 5887 5858 8 1687 868 123 19 0 chrX 144476057 144476219 -22174077 + L1_Mm LINE L1 5254 5418 -465 8 1687 2113 147 26 98 chrX 144476222 144476357 -22173939 - L1_Mur1 LINE L1 -2340 3546 3423 8 1687 1520 134 57 18 chrX 144476357 144476639 -22173657 - Lx LINE L1 -4 6650 6358 8 1687 2113 147 26 98 chrX 144476639 144477046 -22173250 - L1_Mur1 LINE L1 -2464 3422 3043 8 1687 186 0 47 93 chrX 144477058 144477101 -22173195 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 8 1687 4539 69 2 13 chrX 144477115 144477714 -22172582 - L1Md_F2 LINE L1 -2 6580 5989 8 1687 241 347 60 20 chrX 144477881 144477981 -22172315 - B1F SINE Alu -29 120 17 8 1687 224 268 126 35 chrX 144478029 144478162 -22172134 - B1_Mm SINE Alu -2 146 3 8 1687 216 224 16 65 chrX 144478250 144478312 -22171984 + B4 SINE B4 15 73 -219 8 1687 1926 72 15 4 chrX 144478614 144478879 -22171417 - RLTR1C LTR ERV1 0 503 236 8 1687 705 10 105 48 chrX 144478878 144478983 -22171313 - RLTR1C LTR ERV1 -392 111 1 8 1687 13622 92 43 22 chrX 144478983 144481136 -22169160 - MMVL30-int LTR ERV1 0 3698 1501 8 1687 297 0 0 0 chrX 144481281 144481314 -22168982 + (TC)n Simple_repeat Simple_repeat 2 34 0 8 1687 459 0 0 0 chrX 144481314 144481364 -22168932 + (TA)n Simple_repeat Simple_repeat 2 52 0 8 1687 467 154 54 141 chrX 144481468 144481753 -22168543 - MMVL30-int LTR ERV1 -2190 1508 960 8 1687 4438 130 11 4 chrX 144481818 144482551 -22167745 - MMVL30-int LTR ERV1 -2245 1453 716 8 1687 219 173 38 19 chrX 144482882 144482935 -22167361 + (CAAA)n Simple_repeat Simple_repeat 4 57 0 8 1687 2548 180 9 35 chrX 144482978 144483525 -22166771 - MMVL30-int LTR ERV1 -7023 533 1 8 1687 3814 84 4 0 chrX 144483525 144484026 -22166270 - RLTR1C LTR ERV1 0 503 1 8 1687 275 256 23 11 chrX 144484117 144484204 -22166092 + B3 SINE B2 125 212 -4 8 1687 23 0 0 0 chrX 144484438 144484461 -22165835 + AT_rich Low_complexity Low_complexity 1 23 0 8 1687 271 206 0 0 chrX 144484707 144484775 -22165521 + T-rich Low_complexity Low_complexity 1 68 0 8 1687 225 360 80 0 chrX 144485969 144486069 -22164227 + PB1D7 SINE Alu 3 110 -10 8 1687 1329 172 30 0 chrX 144486227 144486494 -22163802 + Lx2A1 LINE L1 6733 7007 -1 8 1687 335 281 60 17 chrX 144486556 144486672 -22163624 + ID_B1 SINE B4 9 129 -95 8 1687 1532 234 48 48 chrX 144486672 144487112 -22163184 + Lx LINE L1 6143 6582 -72 8 1687 214 358 26 93 chrX 144487133 144487284 -22163012 + B4A SINE B4 1 141 -151 8 1687 456 51 0 0 chrX 144487410 144487469 -22162827 + (TC)n Simple_repeat Simple_repeat 1 59 0 8 1687 324 0 0 0 chrX 144487469 144487504 -22162792 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 1687 191 36 0 35 chrX 144487666 144487695 -22162601 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 8 1687 293 288 0 0 chrX 144487736 144487802 -22162494 - ID2 SINE ID -17 66 1 8 1687 468 309 120 5 chrX 144487834 144488026 -22162270 - ID_B1 SINE B4 -9 215 2 8 1687 662 328 12 6 chrX 144489157 144489329 -22160967 + ID_B1 SINE B4 6 178 -46 8 1687 1272 93 22 11 chrX 144491368 144491552 -22158744 - B2_Mm2 SINE B2 -9 186 1 8 1687 360 149 15 0 chrX 144491600 144491667 -22158629 - U3 snRNA snRNA -149 68 1 8 1687 233 254 0 0 chrX 144491963 144492018 -22158278 + (TG)n Simple_repeat Simple_repeat 2 56 0 8 1687 532 336 24 8 chrX 144492111 144492357 -22157939 - Lx9 LINE L1 -1067 6577 6328 8 1687 8091 110 5 1 chrX 144492377 144494389 -22155907 + L1_Mus1 LINE L1 4547 6564 -3 8 1687 381 134 15 0 chrX 144495765 144495832 -22154464 - U3 snRNA snRNA -149 68 1 8 1687 263 273 0 0 chrX 144496135 144496212 -22154084 + (TG)n Simple_repeat Simple_repeat 2 78 0 8 1687 604 306 16 5 chrX 144496293 144496487 -22153809 - Lx9 LINE L1 -1067 6577 6382 8 1687 7185 151 29 31 chrX 144496580 144497913 -22152383 - Lx LINE L1 -1 6653 5336 8 1687 729 0 0 0 chrX 144497913 144497994 -22152302 + (TTTC)n Simple_repeat Simple_repeat 4 84 0 8 1687 9315 122 24 41 chrX 144497994 144499999 -22150297 - Lx LINE L1 -542 5335 3472 8 1687 5941 106 6 2 chrX 144500033 144500905 -22149391 - L1_Mm LINE L1 -2397 3486 2612 1 1687 10114 80 3 36 chrX 144500901 144501682 -22148614 - L1_Mus1 LINE L1 -118 6449 5676 2 1687 2973 95 8 0 chrX 144501682 144502083 -22148213 + L1_Mus1 LINE L1 6162 6565 -2 3 1687 10114 124 6 20 chrX 144502083 144503450 -22146846 - L1_Mus1 LINE L1 -208 5675 4326 2 1687 3099 167 28 54 chrX 144503428 144504117 -22146179 - L1_Mur1 LINE L1 -2813 3073 2403 4 1687 1183 168 22 5 chrX 144504115 144504431 -22145865 - L1_Mur1 LINE L1 -4496 1390 1068 4 1687 1402 207 87 143 chrX 144504431 144504949 -22145347 + RMER19B LTR ERVK 1 489 -413 5 1687 464 293 47 42 chrX 144505566 144505758 -22144538 - MTEa LTR MaLR -165 214 22 6 1687 361 265 98 0 chrX 144505946 144506048 -22144248 + MER5A1 DNA MER1_type 53 164 -2 7 1687 228 366 24 0 chrX 144506816 144506898 -22143398 + MLT1H1 LTR MaLR 345 428 -127 8 1687 4473 155 29 2 chrX 144507095 144508016 -22142280 - Lx5 LINE L1 -1062 5988 5024 9 1687 387 89 0 0 chrX 144508017 144508073 -22142223 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1687 4082 214 58 6 chrX 144508077 144508935 -22141361 + Lx5 LINE L1 6148 7050 0 1 1687 332 294 118 0 chrX 144509107 144509209 -22141087 + PB1 SINE Alu 14 127 0 1 1687 1739 145 14 3 chrX 144509376 144509673 -22140623 - L1_Mus3 LINE L1 -1 6637 6338 1 1687 1345 177 4 0 chrX 144509676 144509908 -22140388 + L1_Mm LINE L1 5411 5643 -240 1 1687 333 242 158 0 chrX 144509910 144510030 -22140266 + B3 SINE B2 53 191 -25 1 1687 620 143 7 0 chrX 144511251 144511391 -22138905 + (TG)n Simple_repeat Simple_repeat 1 141 0 1 1687 319 289 0 66 chrX 144511574 144511696 -22138600 + PB1D9 SINE Alu 5 118 -2 1 1687 315 322 40 33 chrX 144512502 144512653 -22137643 - B4 SINE B4 -18 274 123 1 1687 418 343 0 0 chrX 144512751 144512885 -22137411 - RSINE1 SINE B4 -29 136 3 1 1687 218 246 18 0 chrX 144513219 144513276 -22137020 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 2 1687 261 301 67 19 chrX 144513472 144513577 -22136719 - ID_B1 SINE B4 -7 217 108 2 1687 464 270 113 30 chrX 144514083 144514251 -22136045 + B3 SINE B2 24 205 -11 2 1687 2402 132 136 36 chrX 144515317 144515789 -22134507 + MURVY-LTR LTR ERV1 1 519 0 2 1687 6236 301 44 41 chrX 144515789 144519166 -22131130 + MuRRS4-int LTR ERV1 3 3494 -4062 2 1687 2624 10 0 0 chrX 144519166 144519456 -22130840 - L1Md_A LINE L1 0 6582 6293 2 1687 2597 10 17 10 chrX 144519456 144519755 -22130541 + L1Md_A LINE L1 6004 6304 -278 2 1687 6725 289 18 18 chrX 144519755 144521785 -22128511 + MuRRS4-int LTR ERV1 2243 4272 -791 2 1687 2769 121 90 33 chrX 144522076 144522565 -22127731 + MURVY-LTR LTR ERV1 1 517 -2 2 1687 689 162 6 0 chrX 144522735 144522908 -22127388 + (TG)n Simple_repeat Simple_repeat 1 174 0 2 1687 349 269 8 25 chrX 144523100 144523218 -22127078 + PB1D9 SINE Alu 5 120 0 2 1687 230 326 20 46 chrX 144523714 144523865 -22126431 - B4 SINE B4 -36 256 110 2 1687 403 317 14 27 chrX 144523983 144524129 -22126167 - RSINE1 SINE B4 -19 146 3 2 1687 5383 93 5 7 chrX 144524713 144525462 -22124834 + L1Md_F2 LINE L1 5835 6582 0 3 1687 212 167 0 0 chrX 144525695 144525731 -22124565 + B4 SINE B4 38 73 -219 3 1687 325 25 0 0 chrX 144526035 144526075 -22124221 - RLTR1C LTR ERV1 0 503 464 3 1687 306 320 31 0 chrX 144526068 144526165 -22124131 + B1F SINE Alu 29 128 -21 3 1687 237 182 54 18 chrX 144526176 144526232 -22124064 + Lx6 LINE L1 6524 6581 -879 3 1687 578 278 140 43 chrX 144526233 144526440 -22123856 + Lx5 LINE L1 6480 6706 -344 3 1687 5238 108 12 8 chrX 144526714 144527470 -22122826 - L1_Mus1 LINE L1 -2 6565 5807 3 1687 3025 120 2 9 chrX 144527732 144528282 -22122014 - L1_Mus3 LINE L1 -684 5954 5407 3 1687 1931 124 7 10 chrX 144528282 144528584 -22121712 + L1_Mus3 LINE L1 6338 6638 0 3 1687 3025 165 0 10 chrX 144528584 144528617 -22121679 - L1_Mus3 LINE L1 -477 5406 5375 3 1687 265 307 36 13 chrX 144528746 144528856 -22121440 - B1F SINE Alu -2 115 7 3 1687 3227 212 53 7 chrX 144529021 144529697 -22120599 - Lx4B LINE L1 0 7058 6352 4 1687 269 338 75 23 chrX 144529747 144529880 -22120416 - MLT1L LTR MaLR -160 450 311 4 1687 359 258 107 8 chrX 144530220 144530341 -22119955 - ID_B1 SINE B4 -91 133 1 4 1687 747 311 12 4 chrX 144530385 144530640 -22119656 - Lx7 LINE L1 -396 7300 7044 4 1687 236 296 28 75 chrX 144531426 144531532 -22118764 + MER5A DNA MER1_type 80 180 -9 4 1687 1080 97 7 0 chrX 144531595 144531739 -22118557 + B1_Mm SINE Alu 3 147 0 4 1687 500 260 32 0 chrX 144531863 144531986 -22118310 + B1F1 SINE Alu 6 132 -17 4 1687 333 0 0 0 chrX 144531995 144532032 -22118264 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 4 1687 620 238 7 7 chrX 144532392 144532536 -22117760 + B1_Mur3 SINE Alu 6 149 0 4 1687 23 54 0 0 chrX 144532536 144532573 -22117723 + AT_rich Low_complexity Low_complexity 1 37 0 4 1687 232 348 0 71 chrX 144532631 144532730 -22117566 + PB1D10 SINE Alu 24 115 -2 5 1687 319 349 0 0 chrX 144532756 144532888 -22117408 + L1MC2 LINE L1 6100 6231 -113 5 1687 489 90 90 0 chrX 144533009 144533087 -22117209 - RMER19A LTR ERVK 0 737 653 5 1687 188 125 0 59 chrX 144533130 144533181 -22117115 + (TTAA)n Simple_repeat Simple_repeat 2 49 0 5 1687 2936 41 3 0 chrX 144533245 144533590 -22116706 + ORR1A0 LTR MaLR 1 346 0 5 1687 333 316 31 0 chrX 144533684 144533782 -22116514 + B4A SINE B4 1 101 -191 5 1687 494 275 135 20 chrX 144533851 144534103 -22116193 + L1MB8 LINE L1 5742 6022 -156 5 1687 3152 49 13 0 chrX 144534213 144534602 -22115694 - MTA_Mm LTR MaLR 0 396 3 5 1687 519 295 0 0 chrX 144534606 144534745 -22115551 + ID_B1 SINE B4 86 224 0 5 1687 578 270 208 22 chrX 144535110 144535379 -22114917 + Lx8 LINE L1 7121 7439 -34 5 1687 1727 199 25 11 chrX 144535625 144535985 -22114311 - ORR1B2 LTR MaLR -2 365 1 6 1687 423 132 0 0 chrX 144536127 144536218 -22114078 + (A)n Simple_repeat Simple_repeat 1 91 0 6 1687 3672 188 62 88 chrX 144536224 144537150 -22113146 + RMER19B LTR ERVK 1 902 0 6 1687 451 233 8 33 chrX 144538553 144538673 -22111623 - ID_B1 SINE B4 -4 220 104 6 1687 839 294 0 34 chrX 144539272 144539508 -22110788 + MTEa LTR MaLR 24 251 -128 6 1687 602 145 7 101 chrX 144539570 144539708 -22110588 - URR1B DNA MER1_type -100 125 1 6 1687 662 166 92 6 chrX 144540180 144540344 -22109952 + Lx9 LINE L1 7465 7642 -2 6 1687 788 250 50 10 chrX 144540585 144540787 -22109509 + B3 SINE B2 1 210 -6 6 1687 308 309 80 14 chrX 144540823 144540961 -22109335 + ID_B1 SINE B4 70 216 -8 6 1687 603 81 0 0 chrX 144540975 144541061 -22109235 + (GA)n Simple_repeat Simple_repeat 1 86 0 6 1687 429 36 0 0 chrX 144541172 144541227 -22109069 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1687 265 300 0 59 chrX 144541823 144541908 -22108388 + ID4_ SINE ID 2 81 -2 7 1687 782 188 7 0 chrX 144541958 144542096 -22108200 + B1_Mur4 SINE Alu 5 143 -7 7 1687 430 261 143 7 chrX 144542163 144542317 -22107979 - ID_B1 SINE B4 -47 177 3 7 1687 4638 99 11 1 chrX 144544982 144545651 -22104645 + L1_Mus3 LINE L1 5959 6633 -5 7 1687 32599 81 4 3 chrX 144545659 144550885 -22099411 + L1Md_F2 LINE L1 266 5589 -297 7 1687 7868 58 2 2 chrX 144550885 144551867 -22098429 + L1Md_F2 LINE L1 5590 6571 -14 7 1687 2251 129 28 170 chrX 144552150 144552813 -22097483 + RMER17D LTR ERVK 1 552 -337 7 1687 2804 73 0 3 chrX 144553193 144553552 -22096744 - L1_Mus1 LINE L1 0 6567 6210 7 1687 1986 132 9 9 chrX 144553553 144553896 -22096400 + RMER17D LTR ERVK 547 889 0 7 1687 450 161 0 0 chrX 144553896 144553983 -22096313 - Lx LINE L1 -12 6642 6556 7 1687 429 156 0 0 chrX 144554366 144554443 -22095853 + (CCCA)n Simple_repeat Simple_repeat 3 79 0 7 1687 195 371 50 6 chrX 144554443 144554603 -22095693 - L2a LINE L2 0 3426 3260 8 1687 552 281 213 3 chrX 144557480 144557776 -22092520 - L1MC1 LINE L1 -13 6320 5963 8 1687 21 89 0 0 chrX 144558544 144558600 -22091696 + AT_rich Low_complexity Low_complexity 1 56 0 8 1687 228 297 0 0 chrX 144559307 144559381 -22090915 + PB1D10 SINE Alu 42 115 -2 8 1687 5827 110 19 5 chrX 144559523 144561154 -22089142 - L1VL2 LINE L1 -1789 1826 172 8 1687 283 276 24 87 chrX 144561151 144561278 -22089018 - L1MC1 LINE L1 -390 5954 5836 8 1687 256 333 0 0 chrX 144561340 144561421 -22088875 - ID4_ SINE ID 0 83 3 8 1687 220 125 41 20 chrX 144561607 144561656 -22088640 + A-rich Low_complexity Low_complexity 2 51 0 8 1687 380 248 23 62 chrX 144561735 144561864 -22088432 - L1MCa LINE L1 -5875 633 510 8 1687 280 255 20 50 chrX 144562048 144562147 -22088149 - PB1 SINE Alu -3 124 29 8 1687 560 303 87 19 chrX 144562231 144562497 -22087799 - L1MCa LINE L1 -6220 288 5 8 1687 375 259 90 22 chrX 144562724 144562858 -22087438 - B1F2 SINE Alu -1 148 6 8 1687 312 263 40 0 chrX 144562998 144563097 -22087199 + MER53 DNA hAT 91 193 0 9 1687 639 39 0 0 chrX 144563284 144563362 -22086934 + (TCCC)n Simple_repeat Simple_repeat 3 80 0 9 1687 359 89 0 18 chrX 144563407 144563464 -22086832 + (TCCC)n Simple_repeat Simple_repeat 4 59 0 9 1687 300 320 15 46 chrX 144563561 144563692 -22086604 + LTR16A1 LTR ERVL 55 181 -275 9 1687 186 103 0 0 chrX 144563714 144563743 -22086553 + (TCTCCC)n Simple_repeat Simple_repeat 1 29 0 9 1687 1032 233 79 76 chrX 144563963 144564010 -22086286 + ORR1D1 LTR MaLR 1 38 -336 9 1687 1104 73 0 0 chrX 144564010 144564147 -22086149 + B1_Mus1 SINE Alu 3 139 -9 9 1687 196 53 26 26 chrX 144564147 144564186 -22086110 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 9 1687 1032 233 79 76 chrX 144564186 144564384 -22085912 + ORR1D1 LTR MaLR 39 230 -144 9 1687 186 71 0 0 chrX 144564384 144564412 -22085884 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 9 1687 1032 233 79 76 chrX 144564412 144564531 -22085765 + ORR1D1 LTR MaLR 231 366 -8 9 1687 1773 144 0 45 chrX 144564777 144565090 -22085206 + Lx3B LINE L1 6672 6970 -3 9 1687 310 282 0 0 chrX 144565376 144565447 -22084849 + B1F SINE Alu 21 91 -58 9 1687 601 199 21 35 chrX 144565573 144565714 -22084582 + B1_Mur3 SINE Alu 5 143 -6 1 1687 402 298 20 66 chrX 144565759 144565910 -22084386 + RSINE1 SINE B4 5 148 -17 1 1687 444 37 0 0 chrX 144565920 144565974 -22084322 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 1 1687 1701 251 68 14 chrX 144565999 144566428 -22083868 - Lx6 LINE L1 -179 7281 6830 1 1687 698 291 39 0 chrX 144566744 144566947 -22083349 - ID_B1 SINE B4 -12 212 2 1 1687 2416 139 17 7 chrX 144566996 144567403 -22082893 + Lx2A LINE L1 6589 6999 -9 1 1687 252 86 0 0 chrX 144567403 144567438 -22082858 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1687 229 333 0 0 chrX 144567469 144567529 -22082767 + B3A SINE B2 48 107 -91 1 1687 339 281 26 58 chrX 144567568 144567723 -22082573 + B3 SINE B2 60 209 -7 1 1687 216 167 0 57 chrX 144568682 144568752 -22081544 + A-rich Low_complexity Low_complexity 4 69 0 1 1687 241 184 102 0 chrX 144568881 144568930 -22081366 - ID_B1 SINE B4 -17 207 154 1 1687 246 303 36 28 chrX 144569103 144569204 -22081092 + B1F1 SINE Alu 19 118 -2 1 1687 394 252 210 8 chrX 144569208 144569332 -22080964 + B3 SINE B2 3 151 -65 1 1687 6243 25 0 0 chrX 144569473 144570186 -22080110 - L1_Mm LINE L1 -195 5688 4976 1 1687 1217 21 0 0 chrX 144570187 144570332 -22079964 + L1Md_A LINE L1 6436 6580 -2 1 1687 597 147 0 0 chrX 144570518 144570627 -22079669 + (TCTA)n Simple_repeat Simple_repeat 1 109 0 1 1687 762 258 19 15 chrX 144570641 144570846 -22079450 - ID_B1 SINE B4 -17 207 2 1 1687 276 332 56 79 chrX 144571217 144571433 -22078863 - ORR1E LTR MaLR -148 211 1 1 1687 509 326 0 7 chrX 144571564 144571712 -22078584 + B1F1 SINE Alu 1 147 -2 1 1687 329 295 18 37 chrX 144571850 144571959 -22078337 + B3A SINE B2 1 107 -91 1 1687 21 36 0 0 chrX 144571982 144572010 -22078286 + AT_rich Low_complexity Low_complexity 1 28 0 1 1687 582 354 18 4 chrX 144572046 144572273 -22078023 + B4A SINE B4 2 231 -61 1 210 486 308 13 19 chrX 144572274 144572433 -22077863 + RSINE1 SINE B4 6 163 -2 1 1688 237 190 0 79 chrX 144572473 144572536 -22077760 + B4A SINE B4 235 292 0 1 1688 298 238 12 70 chrX 144572729 144572815 -22077481 - ID4 SINE ID 0 83 3 1 1688 234 304 95 35 chrX 144572830 144572946 -22077350 + MER58B DNA MER1_type 172 294 -47 1 1688 344 344 24 8 chrX 144573359 144573482 -22076814 - B4A SINE B4 -166 126 2 1 1688 274 286 0 16 chrX 144574029 144574125 -22076171 + ID4 SINE ID 9 102 -50 1 1688 387 202 7 118 chrX 144574281 144574416 -22075880 + MT2B LTR ERVL 145 264 -337 1 1688 721 157 0 8 chrX 144574311 144574439 -22075857 + B1_Mus2 SINE Alu 9 135 -12 1 1688 1053 106 0 0 chrX 144574440 144574620 -22075676 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 1688 184 354 31 10 chrX 144575229 144575326 -22074970 - MIRb SINE MIR -50 218 120 1 1688 2840 148 31 24 chrX 144576015 144576554 -22073742 + RLTR13D1 LTR ERVK 1 543 -359 1 1688 3101 112 25 70 chrX 144576527 144577128 -22073168 + RLTR13D1 LTR ERVK 227 803 0 1 1688 464 329 28 5 chrX 144577660 144577877 -22072419 - MLT1E2 LTR MaLR -30 597 376 1 1688 491 0 17 0 chrX 144578118 144578177 -22072119 + (TTTTG)n Simple_repeat Simple_repeat 1 60 0 1 1688 771 178 0 0 chrX 144578177 144578306 -22071990 - B1_Mus1 SINE Alu -13 135 7 1 1688 585 0 0 0 chrX 144578325 144578390 -22071906 + (GGAA)n Simple_repeat Simple_repeat 2 66 0 1 1688 210 263 18 0 chrX 144578426 144578483 -22071813 + ID4_ SINE ID 24 81 -2 1 1688 247 245 0 0 chrX 144578484 144578533 -22071763 + GA-rich Low_complexity Low_complexity 4 52 0 1 1688 723 302 19 0 chrX 144578835 144579040 -22071256 + ID_B1 SINE B4 3 211 -13 1 1688 226 82 19 58 chrX 144579863 144579915 -22070381 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 1 1688 328 287 70 0 chrX 144579915 144580030 -22070266 - ID_B1 SINE B4 0 224 102 1 1688 270 203 0 30 chrX 144580981 144581047 -22069249 + (TCTCTG)n Simple_repeat Simple_repeat 5 68 0 1 1688 204 182 0 0 chrX 144581057 144581101 -22069195 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 1 1688 269 304 0 0 chrX 144581158 144581227 -22069069 - B3A SINE B2 -80 118 50 1 1688 238 268 26 90 chrX 144581921 144581999 -22068297 + RSINE1 SINE B4 92 164 -1 1 1688 582 71 0 0 chrX 144582054 144582138 -22068158 - BC1_Mm scRNA scRNA -56 96 13 1 1688 259 31 4 45 chrX 144582138 144582192 -22068104 + L1_Mus2 LINE L1 6526 6581 -1 1 1688 562 293 191 17 chrX 144582432 144582725 -22067571 + MTE2a LTR MaLR 1 344 -35 1 1688 188 0 74 0 chrX 144582725 144582752 -22067544 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1688 1013 137 0 0 chrX 144582763 144582909 -22067387 - B1_Mus2 SINE Alu -1 146 1 1 1688 266 276 0 0 chrX 144583225 144583283 -22067013 - PB1D10 SINE Alu -37 80 23 1 1688 363 44 0 0 chrX 144583291 144583336 -22066960 + (CCCTG)n Simple_repeat Simple_repeat 2 46 0 1 1688 387 113 0 0 chrX 144583504 144583566 -22066730 + (TC)n Simple_repeat Simple_repeat 2 63 0 1 1688 282 282 93 8 chrX 144583568 144583581 -22066715 - B1F SINE Alu 0 149 132 1 1688 3943 71 2 2 chrX 144583581 144584092 -22066204 - L1_Mus1 LINE L1 -2 6565 6055 1 1688 282 282 93 8 chrX 144584092 144584196 -22066100 - B1F SINE Alu -18 131 22 1 1688 481 277 0 8 chrX 144584196 144584212 -22066084 - ID_B1 SINE B4 -18 206 88 1 1688 237 245 0 0 chrX 144584206 144584255 -22066041 - ID SINE ID -174 50 2 1 1688 2019 62 88 0 chrX 144584454 144584728 -22065568 - L1Md_F2 LINE L1 -526 6056 5759 1 1688 2882 108 87 46 chrX 144585490 144585987 -22064309 + MURVY-LTR LTR ERV1 1 517 -2 1 1688 358 286 50 72 chrX 144585989 144586281 -22064015 + RLTR6-int LTR ERV1 3 268 -7510 1 1688 4314 282 24 36 chrX 144586328 144588085 -22062211 + RLTR6-int LTR ERV1 343 2336 -5442 1 1688 5032 313 34 32 chrX 144588220 144591242 -22059054 + RLTR6-int LTR ERV1 2632 5289 -2312 1 1688 2445 141 124 34 chrX 144591514 144591990 -22058306 + MURVY-LTR LTR ERV1 1 519 0 1 1688 341 184 9 0 chrX 144592154 144592268 -22058028 + (TG)n Simple_repeat Simple_repeat 1 115 0 1 1688 296 256 16 71 chrX 144592445 144592571 -22057725 + PB1D9 SINE Alu 2 120 0 1 1688 2183 105 239 26 chrX 144593071 144593523 -22056773 + RLTR6_Mm LTR ERV1 37 584 -70 1 1688 251 331 30 48 chrX 144593935 144594103 -22056193 - B4 SINE B4 -18 274 110 1 1688 354 345 14 27 chrX 144594175 144594321 -22055975 - RSINE1 SINE B4 -19 146 3 1 1688 224 167 0 0 chrX 144595155 144595191 -22055105 + B4 SINE B4 38 73 -219 1 1688 3711 91 0 18 chrX 144595495 144596007 -22054289 - RLTR1C LTR ERV1 0 503 1 1 1688 356 306 109 29 chrX 144596040 144596215 -22054081 + B3 SINE B2 24 212 -4 1 1688 410 197 7 0 chrX 144597427 144597564 -22052732 + (TG)n Simple_repeat Simple_repeat 1 138 0 1 1688 304 299 17 25 chrX 144597754 144597874 -22052422 + PB1D9 SINE Alu 2 120 0 1 1688 23 0 0 0 chrX 144598012 144598035 -22052261 + AT_rich Low_complexity Low_complexity 1 23 0 1 1688 282 298 24 47 chrX 144598715 144598842 -22051454 - B4 SINE B4 -46 246 123 1 1688 246 311 67 19 chrX 144599693 144599798 -22050498 - ID_B1 SINE B4 -7 217 108 1 1688 233 184 20 0 chrX 144599923 144599972 -22050324 + B4 SINE B4 24 73 -219 1 1688 460 242 123 32 chrX 144600295 144600449 -22049847 + B3 SINE B2 24 191 -25 1 1688 463 136 18 0 chrX 144601655 144601765 -22048531 + (TG)n Simple_repeat Simple_repeat 2 113 0 1 1688 311 274 8 64 chrX 144601993 144602118 -22048178 + PB1D9 SINE Alu 2 119 -1 1 1688 267 298 24 47 chrX 144602955 144603082 -22047214 - B4 SINE B4 -46 246 123 1 1688 285 403 0 14 chrX 144603168 144603314 -22046982 - RSINE1 SINE B4 -19 146 3 1 1688 3619 102 2 4 chrX 144604487 144604991 -22045305 - RLTR1C LTR ERV1 0 503 1 1 1688 288 262 198 0 chrX 144605151 144605277 -22045019 + B3 SINE B2 24 174 -42 1 1688 282 143 0 0 chrX 144606515 144606578 -22043718 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 1688 299 302 0 56 chrX 144606833 144606959 -22043337 + PB1D9 SINE Alu 2 120 0 1 1688 227 357 51 34 chrX 144607744 144607921 -22042375 - B4 SINE B4 -3 289 110 1 1688 233 358 32 32 chrX 144607984 144608140 -22042156 - RSINE1 SINE B4 -7 158 3 1 1688 229 159 23 0 chrX 144608997 144609041 -22041255 + B4 SINE B4 29 73 -219 1 1688 3555 110 2 4 chrX 144609345 144609848 -22040448 - RLTR1C LTR ERV1 0 503 2 1 1688 481 249 114 34 chrX 144609882 144610057 -22040239 + B3 SINE B2 24 212 -4 1 1688 554 183 6 0 chrX 144611250 144611414 -22038882 + (TG)n Simple_repeat Simple_repeat 1 165 0 1 1688 339 280 8 25 chrX 144611594 144611715 -22038581 + PB1D9 SINE Alu 2 120 0 1 1688 318 298 24 47 chrX 144612549 144612676 -22037620 - B4 SINE B4 -46 246 123 1 1688 243 373 14 27 chrX 144612761 144612907 -22037389 - RSINE1 SINE B4 -19 146 3 1 1688 243 325 12 0 chrX 144612919 144613002 -22037294 - B4 SINE B4 -207 85 2 1 1688 235 224 16 65 chrX 144613715 144613777 -22036519 + B4 SINE B4 15 73 -219 1 1688 3372 109 20 4 chrX 144614080 144614575 -22035721 - RLTR1C LTR ERV1 0 503 1 1 1688 310 283 156 40 chrX 144614737 144614910 -22035386 + B3 SINE B2 24 216 0 1 1688 563 153 7 0 chrX 144616102 144616252 -22034044 + (TG)n Simple_repeat Simple_repeat 2 152 0 1 1688 333 311 0 56 chrX 144616482 144616608 -22033688 + PB1D9 SINE Alu 2 120 0 1 1688 284 357 51 34 chrX 144617393 144617570 -22032726 - B4 SINE B4 -3 289 110 1 1688 245 358 32 32 chrX 144617633 144617789 -22032507 - RSINE1 SINE B4 -7 158 3 1 1688 227 282 14 0 chrX 144617809 144617880 -22032416 - B4 SINE B4 -216 76 5 1 1688 238 304 76 29 chrX 144618408 144618513 -22031783 - ID_B1 SINE B4 -7 217 108 2 1688 244 207 16 65 chrX 144618625 144618687 -22031609 + B4 SINE B4 15 73 -219 2 1688 3555 104 4 4 chrX 144618991 144619493 -22030803 - RLTR1C LTR ERV1 0 503 2 2 1688 485 260 115 29 chrX 144619527 144619701 -22030595 + B3 SINE B2 24 212 -4 2 1688 887 97 7 0 chrX 144620895 144621049 -22029247 + (TG)n Simple_repeat Simple_repeat 1 155 0 2 1688 327 278 8 25 chrX 144621277 144621395 -22028901 + PB1D9 SINE Alu 5 120 0 2 1688 31 44 0 0 chrX 144621533 144621578 -22028718 + AT_rich Low_complexity Low_complexity 1 45 0 2 1688 483 18 0 0 chrX 144622090 144622146 -22028150 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1688 370 335 22 38 chrX 144622239 144622422 -22027874 - B4 SINE B4 -3 289 110 2 1688 388 314 28 35 chrX 144622495 144622640 -22027656 - RSINE1 SINE B4 -19 146 3 2 1688 578 121 0 8 chrX 144623825 144623942 -22026354 + (TG)n Simple_repeat Simple_repeat 1 116 0 2 1688 275 322 8 25 chrX 144624168 144624289 -22026007 + PB1D9 SINE Alu 2 120 0 2 1688 402 125 0 0 chrX 144624720 144624800 -22025496 + (T)n Simple_repeat Simple_repeat 1 80 0 2 1688 280 350 48 0 chrX 144625997 144626100 -22024196 + PB1D7 SINE Alu 3 110 -10 2 1688 1132 176 29 29 chrX 144626260 144626535 -22023761 + Lx2A1 LINE L1 6733 7007 -1 2 1688 387 230 2 16 chrX 144626586 144626672 -22023624 + ID SINE ID 9 88 -204 2 1688 2168 199 43 35 chrX 144626693 144627203 -22023093 + Lx LINE L1 6134 6647 -7 2 1688 2306 169 8 28 chrX 144627198 144627371 -22022925 + L1_Mm LINE L1 5289 5459 -424 2 1688 1223 125 64 18 chrX 144627371 144627591 -22022705 + L1_Mus3 LINE L1 6405 6634 -4 2 1688 2306 169 8 28 chrX 144627591 144627886 -22022410 + L1_Mm LINE L1 5460 5748 -135 2 1688 1801 149 26 3 chrX 144627879 144628223 -22022073 - L1_Mur2 LINE L1 -576 5301 4950 2 1688 226 279 0 29 chrX 144628587 144628657 -22021639 + (TATG)n Simple_repeat Simple_repeat 3 70 0 2 1688 539 309 7 137 chrX 144628707 144628765 -22021531 - B4 SINE B4 -26 266 217 2 1688 228 35 0 0 chrX 144628765 144628794 -22021502 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1688 539 309 7 137 chrX 144628794 144628951 -22021345 - B4 SINE B4 -76 216 77 2 1688 302 313 105 33 chrX 144628951 144629103 -22021193 - RSINE1 SINE B4 0 165 3 2 1688 539 309 7 137 chrX 144629103 144629178 -22021118 - B4 SINE B4 -216 76 13 2 1688 3486 259 47 25 chrX 144629621 144630881 -22019415 - Lx9 LINE L1 -18 7626 6184 2 1688 990 136 0 0 chrX 144630881 144631050 -22019246 + (TA)n Simple_repeat Simple_repeat 2 170 0 2 1688 845 274 34 69 chrX 144631050 144631530 -22018766 - Lx9 LINE L1 -1290 6183 5715 2 1688 298 241 0 0 chrX 144631508 144631587 -22018709 - L1_Rod LINE L1 -1525 4322 4244 2 1688 518 273 144 4 chrX 144631836 144632079 -22018217 + Lx8 LINE L1 7196 7472 -1 2 1688 298 287 57 11 chrX 144632104 144632192 -22018104 + B3A SINE B2 25 116 -82 2 1688 396 0 0 0 chrX 144632243 144632287 -22018009 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1688 380 334 9 36 chrX 144633500 144633640 -22016656 - B1F SINE Alu -1 148 13 2 1688 595 306 61 1 chrX 144633970 144634143 -22016153 + B3A SINE B2 2 188 -28 2 1688 459 35 0 0 chrX 144634143 144634200 -22016096 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1688 591 312 82 10 chrX 144634200 144634220 -22016076 + B3 SINE B2 189 208 -8 2 1688 328 323 142 69 chrX 144634425 144634658 -22015638 + B4A SINE B4 14 263 -29 2 1688 501 17 0 0 chrX 144634697 144634755 -22015541 + (TC)n Simple_repeat Simple_repeat 2 59 0 2 1688 348 43 0 0 chrX 144634757 144634803 -22015493 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1688 203 161 17 35 chrX 144634963 144635021 -22015275 + (GTTTG)n Simple_repeat Simple_repeat 3 59 0 2 1688 269 259 0 0 chrX 144635029 144635087 -22015209 - ID4_ SINE ID -17 66 9 2 1688 393 347 104 0 chrX 144635166 144635310 -22014986 - ID_B1 SINE B4 -64 160 2 2 1688 671 312 57 5 chrX 144636466 144636659 -22013637 + ID_B1 SINE B4 6 208 -16 2 1688 218 200 0 0 chrX 144636973 144637013 -22013283 + GA-rich Low_complexity Low_complexity 3 42 0 2 1688 404 147 0 0 chrX 144638162 144638230 -22012066 - U3 snRNA snRNA -149 68 1 2 1688 288 260 0 0 chrX 144638533 144638610 -22011686 + (TG)n Simple_repeat Simple_repeat 2 78 0 2 1688 586 316 16 5 chrX 144638691 144638885 -22011411 - Lx9 LINE L1 -1067 6577 6382 2 1688 5982 130 27 19 chrX 144638945 144640116 -22010180 - Lx LINE L1 -1 6653 5476 2 1688 835 124 90 0 chrX 144640114 144640291 -22010005 - L1VL2 LINE L1 -444 3171 2979 2 1688 890 122 14 0 chrX 144640294 144640441 -22009855 + (TTTC)n Simple_repeat Simple_repeat 2 150 0 2 1688 6568 97 12 6 chrX 144640931 144641914 -22008382 - L1Md_F2 LINE L1 -1 6581 5593 2 1688 1204 92 0 26 chrX 144641913 144642103 -22008193 - L1Md_A LINE L1 -2898 2985 2801 2 1688 36092 42 9 0 chrX 144642084 144648227 -22002069 - L1Md_A LINE L1 -1 6581 387 2 1688 6413 116 54 22 chrX 144648229 144649994 -22000302 - L1VL2 LINE L1 -1449 2166 350 2 1688 660 215 56 0 chrX 144649994 144650138 -22000158 - L1VL2 LINE L1 -5893 442 291 2 1688 297 289 12 12 chrX 144650519 144650608 -21999688 + B3A SINE B2 1 89 -127 2 1688 230 360 48 62 chrX 144650608 144650664 -21999632 + ID_B1 SINE B4 1 143 -81 2 1688 204 237 143 13 chrX 144651137 144651214 -21999082 + MIR3 SINE MIR 85 171 -37 2 1688 184 356 14 0 chrX 144651924 144651997 -21998299 - MIRb SINE MIR -75 193 120 2 1688 506 306 114 101 chrX 144653253 144653631 -21996665 - MLT1E2 LTR MaLR -29 624 242 2 1688 818 204 0 14 chrX 144653721 144653865 -21996431 - B1_Mus1 SINE Alu 0 148 7 2 1688 441 95 0 0 chrX 144653882 144653945 -21996351 + (GGAA)n Simple_repeat Simple_repeat 4 66 0 2 1688 258 245 0 0 chrX 144654036 144654089 -21996207 + GA-rich Low_complexity Low_complexity 4 56 0 2 1688 644 302 0 0 chrX 144654413 144654575 -21995721 + ID_B1 SINE B4 53 214 -10 2 1688 264 317 48 38 chrX 144654683 144654788 -21995508 - PB1D10 SINE Alu -35 114 9 2 1688 244 337 61 0 chrX 144654841 144654939 -21995357 - B1F SINE Alu -37 112 9 2 1688 264 324 27 0 chrX 144654971 144655045 -21995251 - ID4 SINE ID -4 79 4 2 1688 189 0 0 0 chrX 144655435 144655456 -21994840 + (TTGG)n Simple_repeat Simple_repeat 3 23 0 2 1688 228 86 0 0 chrX 144655459 144655494 -21994802 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2 1688 381 237 67 50 chrX 144655501 144655587 -21994709 - ID_B1 SINE B4 0 224 136 2 1688 3193 56 5 0 chrX 144655587 144655981 -21994315 + MTA_Mm LTR MaLR 1 396 0 2 1688 381 237 67 50 chrX 144655981 144656014 -21994282 - ID_B1 SINE B4 -89 135 103 2 1688 233 250 25 0 chrX 144656062 144656142 -21994154 - L1MB7 LINE L1 -56 6128 6047 2 1688 380 239 17 17 chrX 144656981 144657096 -21993200 + (TCTG)n Simple_repeat Simple_repeat 2 116 0 2 1688 271 357 107 0 chrX 144657120 144657232 -21993064 - B3A SINE B2 -22 176 53 2 1688 432 0 0 0 chrX 144657642 144657690 -21992606 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1688 386 222 45 60 chrX 144658385 144658519 -21991777 - ID_B1 SINE B4 0 224 93 2 1688 294 87 0 0 chrX 144659250 144659296 -21991000 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 2 1688 189 0 0 0 chrX 144659416 144659437 -21990859 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1688 574 108 129 0 chrX 144659491 144659584 -21990712 - BC1_Mm scRNA scRNA -35 117 13 2 1688 225 49 0 0 chrX 144659584 144659625 -21990671 + L1_Mus2 LINE L1 6526 6566 0 2 1688 22 35 0 0 chrX 144659625 144659654 -21990642 + AT_rich Low_complexity Low_complexity 1 29 0 2 1688 546 298 205 17 chrX 144659877 144660165 -21990131 + MTE2a LTR MaLR 1 342 -37 2 1688 305 0 50 0 chrX 144660165 144660205 -21990091 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 2 1688 972 129 0 0 chrX 144660205 144660344 -21989952 - B1_Mus2 SINE Alu -8 139 1 2 1688 240 143 0 0 chrX 144660344 144660386 -21989910 + (T)n Simple_repeat Simple_repeat 1 42 0 2 1688 600 40 0 0 chrX 144660671 144660746 -21989550 + (CCCTG)n Simple_repeat Simple_repeat 2 76 0 2 1688 582 28 0 0 chrX 144660912 144660984 -21989312 + (TTTC)n Simple_repeat Simple_repeat 2 73 0 2 1688 2447 81 14 0 chrX 144660997 144661343 -21988953 - L1_Mus1 LINE L1 -2 6565 6215 2 1688 22084 75 1 0 chrX 144661345 144664446 -21985850 + L1Md_F2 LINE L1 2484 5586 -297 2 1688 7514 59 25 2 chrX 144664446 144665407 -21984889 + L1Md_F2 LINE L1 5587 6569 -13 2 1688 229 214 0 0 chrX 144665633 144665675 -21984621 + B3A SINE B2 4 45 -153 2 1688 2984 110 8 97 chrX 144665706 144666048 -21984248 + RMER17D LTR ERVK 1 330 -559 2 1688 1055 94 0 22 chrX 144666048 144666232 -21984064 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 2 1688 2984 110 8 97 chrX 144666232 144666495 -21983801 + RMER17D LTR ERVK 331 552 -337 2 1688 2963 64 3 3 chrX 144666871 144667230 -21983066 - L1_Mus1 LINE L1 0 6567 6209 2 1688 2196 118 9 9 chrX 144667230 144667573 -21982723 + RMER17D LTR ERVK 547 889 0 2 1688 482 93 58 0 chrX 144667573 144667659 -21982637 - Lx LINE L1 -12 6642 6552 2 1688 408 125 0 0 chrX 144668040 144668104 -21982192 + (CCCA)n Simple_repeat Simple_repeat 3 66 0 2 1688 197 408 25 44 chrX 144668104 144668263 -21982033 - L2b LINE L2 -3 3372 3217 2 1688 423 306 20 0 chrX 144671134 144671281 -21979015 - L1MC1 LINE L1 -163 6170 6021 2 1688 21 89 0 0 chrX 144671996 144672052 -21978244 + AT_rich Low_complexity Low_complexity 1 56 0 2 1688 279 284 0 0 chrX 144672762 144672836 -21977460 + PB1D10 SINE Alu 42 115 -2 2 1688 5644 109 30 3 chrX 144672980 144674016 -21976280 - L1VL2 LINE L1 -1789 2123 1049 2 1688 39225 49 9 0 chrX 144674077 144680522 -21969774 - L1Md_T LINE L1 -1 6581 147 2 1688 4152 117 30 12 chrX 144680521 144681160 -21969136 - L1VL2 LINE L1 -5514 1118 469 2 1688 289 278 33 0 chrX 144681157 144681247 -21969049 - L1MC1 LINE L1 -379 5954 5862 2 1688 358 318 0 8 chrX 144681323 144681456 -21968840 - BC1_Mm scRNA scRNA -18 134 3 2 1688 189 0 0 0 chrX 144681605 144681626 -21968670 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1688 208 133 0 82 chrX 144681652 144681701 -21968595 + A-rich Low_complexity Low_complexity 2 46 0 2 1688 375 248 23 62 chrX 144681780 144681909 -21968387 - L1MCa LINE L1 -5875 633 510 2 1688 361 242 10 40 chrX 144682092 144682191 -21968105 - PB1 SINE Alu -3 124 29 3 1688 610 291 87 19 chrX 144682275 144682541 -21967755 - L1MCa LINE L1 -6220 288 5 2 1688 472 242 89 22 chrX 144682773 144682908 -21967388 - B1F2 SINE Alu 0 149 6 3 1688 302 278 41 0 chrX 144683050 144683147 -21967149 + MER53 DNA hAT 93 193 0 3 1688 193 344 11 32 chrX 144683214 144683307 -21966989 + MER5A DNA MER1_type 1 91 -98 3 1688 501 47 0 0 chrX 144683336 144683400 -21966896 + (TCCC)n Simple_repeat Simple_repeat 3 66 0 3 1688 296 102 0 20 chrX 144683451 144683501 -21966795 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 3 1688 193 254 0 83 chrX 144683531 144683591 -21966705 - L3 LINE CR1 -3646 843 789 3 1688 363 321 20 41 chrX 144683591 144683737 -21966559 + LTR16A1 LTR ERVL 47 189 -267 3 1688 224 131 0 21 chrX 144683752 144683799 -21966497 + CT-rich Low_complexity Low_complexity 2 47 0 3 1688 1163 213 48 156 chrX 144684002 144684049 -21966247 + ORR1D1 LTR MaLR 1 38 -336 3 1688 1242 55 0 20 chrX 144684049 144684198 -21966098 + B1_Mus1 SINE Alu 3 148 0 3 1688 1163 213 48 156 chrX 144684198 144684567 -21965729 + ORR1D1 LTR MaLR 39 372 -2 3 1688 1891 141 0 45 chrX 144684808 144685121 -21965175 + Lx3B LINE L1 6672 6970 -3 3 1688 21 0 0 0 chrX 144685128 144685149 -21965147 + AT_rich Low_complexity Low_complexity 1 21 0 3 1688 322 279 0 0 chrX 144685410 144685478 -21964818 + B1F SINE Alu 21 88 -61 3 1688 596 213 21 29 chrX 144685608 144685748 -21964548 + B1_Mur3 SINE Alu 5 143 -6 3 1688 430 298 20 66 chrX 144685793 144685944 -21964352 + RSINE1 SINE B4 5 148 -17 3 1688 543 31 0 0 chrX 144685955 144686020 -21964276 + (TAAA)n Simple_repeat Simple_repeat 4 68 0 3 1688 1652 259 65 12 chrX 144686046 144686475 -21963821 - Lx6 LINE L1 -179 7281 6830 3 1688 711 298 40 0 chrX 144686796 144686994 -21963302 - ID_B1 SINE B4 -17 207 2 3 1688 2590 141 17 10 chrX 144687018 144687433 -21962863 + Lx2A LINE L1 6589 7006 -2 3 1688 414 100 0 0 chrX 144687434 144687494 -21962802 + (TAAA)n Simple_repeat Simple_repeat 2 61 0 3 1688 434 236 0 33 chrX 144687524 144687616 -21962680 + B3 SINE B2 48 136 -80 3 1688 246 81 0 0 chrX 144687621 144687658 -21962638 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1688 2020 177 34 13 chrX 144687699 144688077 -21962219 - ORR1B1 LTR MaLR -8 386 1 3 1688 326 266 13 0 chrX 144688082 144688161 -21962135 + B3A SINE B2 60 139 -59 3 1688 343 326 67 97 chrX 144688255 144688638 -21961658 - ORR1E LTR MaLR 0 370 1 3 1688 525 320 0 7 chrX 144688769 144688917 -21961379 + B1F1 SINE Alu 1 147 -2 3 1688 335 298 21 31 chrX 144689055 144689152 -21961144 + B3A SINE B2 1 96 -102 3 1688 653 36 0 12 chrX 144689158 144689243 -21961053 + (TA)n Simple_repeat Simple_repeat 1 84 0 3 1688 23 0 0 0 chrX 144689243 144689266 -21961030 + AT_rich Low_complexity Low_complexity 1 23 0 3 1688 661 350 18 4 chrX 144689302 144689529 -21960767 + B4A SINE B4 2 231 -61 3 1688 589 282 25 19 chrX 144689530 144689689 -21960607 + RSINE1 SINE B4 6 165 0 3 1688 254 207 0 79 chrX 144689729 144689792 -21960504 + B4A SINE B4 235 292 0 3 1688 311 238 12 70 chrX 144689985 144690071 -21960225 - ID4 SINE ID 0 83 3 3 1688 277 295 95 35 chrX 144690086 144690202 -21960094 + MER58B DNA MER1_type 172 294 -47 3 1688 382 336 24 8 chrX 144690616 144690739 -21959557 - B4A SINE B4 -166 126 2 3 1688 284 299 0 16 chrX 144691286 144691382 -21958914 + ID4 SINE ID 9 102 -50 3 1688 799 165 15 8 chrX 144691562 144691696 -21958600 + B1_Mus2 SINE Alu 1 135 -12 3 1688 843 109 0 0 chrX 144691696 144691843 -21958453 + (GA)n Simple_repeat Simple_repeat 2 148 0 3 1688 217 246 0 21 chrX 144691896 144691948 -21958348 + B3 SINE B2 1 51 -147 3 1688 193 326 21 42 chrX 144692454 144692550 -21957746 - MIRb SINE MIR -50 218 125 3 1688 3148 152 52 51 chrX 144693265 144694308 -21955988 + RLTR13D1 LTR ERVK 1 1023 0 3 1688 475 346 19 5 chrX 144694849 144695058 -21955238 - MLT1E2 LTR MaLR -40 587 376 3 1688 458 16 49 0 chrX 144695294 144695355 -21954941 + (TTTTG)n Simple_repeat Simple_repeat 1 64 0 3 1688 814 178 0 0 chrX 144695355 144695484 -21954812 - B1_Mus1 SINE Alu -13 135 7 3 1688 780 11 0 0 chrX 144695503 144695592 -21954704 + (GGAA)n Simple_repeat Simple_repeat 2 90 0 3 1688 256 250 18 0 chrX 144695628 144695684 -21954612 + ID4_ SINE ID 24 80 -3 3 1688 260 250 0 0 chrX 144695684 144695736 -21954560 + polypurine Low_complexity Low_complexity 1 52 0 3 1688 836 298 19 0 chrX 144696036 144696244 -21954052 + ID_B1 SINE B4 3 214 -10 3 1688 230 262 93 23 chrX 144696369 144696455 -21953841 - B1F2 SINE Alu -49 100 9 3 1688 344 296 70 0 chrX 144697101 144697216 -21953080 - ID_B1 SINE B4 0 224 102 3 1688 236 284 105 26 chrX 144697575 144697651 -21952645 + ID4 SINE ID 2 83 0 3 1688 216 352 95 8 chrX 144697651 144697701 -21952595 + ID_B1 SINE B4 2 138 -86 3 1688 266 194 0 31 chrX 144698174 144698238 -21952058 + (TCTCTG)n Simple_repeat Simple_repeat 5 66 0 3 1688 204 182 0 0 chrX 144698248 144698292 -21952004 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 3 1688 263 287 245 0 chrX 144698349 144698443 -21951853 - B3A SINE B2 -80 118 2 3 1688 192 40 0 0 chrX 144698727 144698752 -21951544 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 3 1688 306 107 0 0 chrX 144699020 144699076 -21951220 + (T)n Simple_repeat Simple_repeat 1 56 0 3 1688 272 365 0 13 chrX 144699155 144699230 -21951066 + RSINE1 SINE B4 92 165 0 3 1688 606 83 0 0 chrX 144699290 144699374 -21950922 - BC1_Mm scRNA scRNA -56 96 13 3 1688 264 40 0 39 chrX 144699374 144699426 -21950870 + L1_Mus2 LINE L1 6526 6580 -2 3 1688 587 301 195 17 chrX 144699667 144699959 -21950337 + MTE2a LTR MaLR 1 344 -35 3 1688 190 27 51 51 chrX 144699959 144699998 -21950298 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 3 1688 1044 139 0 0 chrX 144699999 144700143 -21950153 - B1_Mus2 SINE Alu -3 144 1 3 1688 254 281 18 0 chrX 144700459 144700516 -21949780 - PB1D10 SINE Alu -37 80 23 3 1688 363 44 0 0 chrX 144700524 144700569 -21949727 + (CCCTG)n Simple_repeat Simple_repeat 2 46 0 3 1688 603 117 0 0 chrX 144700738 144700832 -21949464 + (TC)n Simple_repeat Simple_repeat 2 95 0 3 1688 4173 71 2 2 chrX 144700848 144701356 -21948940 - L1_Mus1 LINE L1 -2 6565 6058 3 1688 539 261 280 17 chrX 144701356 144701523 -21948773 - ID_B1 SINE B4 -10 214 2 3 1688 26 0 0 0 chrX 144701885 144701911 -21948385 + AT_rich Low_complexity Low_complexity 1 26 0 3 1688 379 247 0 12 chrX 144702029 144702111 -21948185 + MER20 DNA MER1_type 121 201 -18 3 1688 1073 47 18 85 chrX 144702497 144702661 -21947635 - B2_Mm2 SINE B2 -7 188 36 3 1688 240 315 27 0 chrX 144702658 144702731 -21947565 - B4A SINE B4 -217 75 1 3 1688 272 288 39 85 chrX 144702781 144702910 -21947386 - RSINE1 SINE B4 -31 134 12 3 1688 470 289 35 21 chrX 144702905 144703050 -21947246 - ID_B1 SINE B4 -77 147 1 3 1689 235 275 93 53 chrX 144703828 144703978 -21946318 - L1MC LINE L1 -2118 5764 5609 3 1689 264 370 79 0 chrX 144704346 144704473 -21945823 + MER5A DNA MER1_type 8 144 -45 3 1689 358 272 9 81 chrX 144704617 144704749 -21945547 - B3A SINE B2 -5 193 70 3 1689 272 303 109 36 chrX 144704779 144704916 -21945380 - B1F2 SINE Alu -1 148 2 3 1689 660 154 11 10 chrX 144704955 144705086 -21945210 - L1_Mur2 LINE L1 -2202 3944 3778 3 1689 236 239 71 43 chrX 144705321 144705391 -21944905 + ID4_ SINE ID 9 80 -3 3 1689 229 337 133 0 chrX 144705467 144705565 -21944731 + B1F1 SINE Alu 1 111 -38 3 1689 265 273 44 35 chrX 144705628 144705742 -21944554 + PB1D10 SINE Alu 2 116 -1 3 1689 242 95 0 23 chrX 144706119 144706162 -21944134 + (TTG)n Simple_repeat Simple_repeat 3 44 0 3 1689 309 76 45 0 chrX 144706729 144706795 -21943501 + (CAAAAA)n Simple_repeat Simple_repeat 4 72 0 3 1689 314 241 53 53 chrX 144706865 144706979 -21943317 - B4A SINE B4 -173 119 6 3 1689 6194 76 30 21 chrX 144708008 144708812 -21941484 - L1Md_F2 LINE L1 -13 6569 5759 3 1689 2977 120 87 46 chrX 144709574 144710071 -21940225 + MURVY-LTR LTR ERV1 1 517 -2 3 1689 369 302 35 61 chrX 144710073 144710365 -21939931 + MuRRS4-int LTR ERV1 3 268 -7510 3 1689 4396 287 25 36 chrX 144710412 144712171 -21938125 + MuRRS4-int LTR ERV1 343 2336 -5442 3 1689 2750 304 6 11 chrX 144712261 144713139 -21937157 + MuRRS4-int LTR ERV1 2367 3239 -1451 3 1689 213 260 0 20 chrX 144713169 144713220 -21937076 - ID SINE ID -153 71 22 3 1689 354 351 23 41 chrX 144713705 144713877 -21936419 - B4 SINE B4 -14 278 110 3 1689 315 366 14 27 chrX 144713950 144714096 -21936200 - RSINE1 SINE B4 -19 146 3 3 1689 257 294 76 29 chrX 144714719 144714824 -21935472 - ID_B1 SINE B4 -7 217 108 3 1689 265 111 0 0 chrX 144714965 144715001 -21935295 + B4 SINE B4 38 73 -219 3 1689 3532 122 20 2 chrX 144715308 144715802 -21934494 - RLTR1C LTR ERV1 0 503 1 3 1689 442 264 159 0 chrX 144715835 144715998 -21934298 + B3 SINE B2 24 212 -4 3 1689 713 79 9 0 chrX 144717191 144717305 -21932991 + (TG)n Simple_repeat Simple_repeat 1 115 0 3 1689 350 275 0 30 chrX 144717538 144717660 -21932636 + B1_Mm SINE Alu 2 120 0 3 1689 347 291 42 60 chrX 144718477 144718645 -21931651 - B4 SINE B4 -18 274 110 3 1689 403 345 14 27 chrX 144718717 144718863 -21931433 - RSINE1 SINE B4 -19 146 3 3 1689 200 246 18 0 chrX 144719200 144719257 -21931039 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 3 1689 227 194 0 0 chrX 144719696 144719732 -21930564 + B4 SINE B4 38 73 -219 3 1689 3837 99 0 14 chrX 144720035 144720545 -21929751 - RLTR1C LTR ERV1 0 503 1 4 1689 451 294 109 29 chrX 144720579 144720754 -21929542 + B3 SINE B2 24 212 -4 4 1689 225 141 28 14 chrX 144721967 144722003 -21928293 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1689 228 35 0 0 chrX 144722003 144722032 -21928264 + (TC)n Simple_repeat Simple_repeat 2 30 0 4 1689 225 141 28 14 chrX 144722032 144722067 -21928229 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 1689 399 263 0 63 chrX 144722293 144722419 -21927877 + PB1D9 SINE Alu 2 119 -1 4 1689 347 360 29 43 chrX 144723215 144723424 -21926872 - B4 SINE B4 0 292 87 4 1689 272 380 14 27 chrX 144723474 144723620 -21926676 - RSINE1 SINE B4 -19 146 3 4 1689 234 325 12 0 chrX 144723632 144723715 -21926581 - B4 SINE B4 -207 85 2 4 1689 219 259 0 0 chrX 144723956 144724014 -21926282 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 4 1689 218 241 16 65 chrX 144724426 144724488 -21925808 + B4 SINE B4 15 73 -219 4 1689 1648 128 1 12 chrX 144724792 144725075 -21925221 - RLTR1C LTR ERV1 -16 589 258 4 1689 192 40 0 0 chrX 144726243 144726268 -21924028 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1689 327 32 62 31 chrX 144726271 144726335 -21923961 + (TCTG)n Simple_repeat Simple_repeat 1 66 0 4 1689 209 250 0 38 chrX 144726350 144726429 -21923867 + (TG)n Simple_repeat Simple_repeat 1 76 0 4 1689 369 274 0 57 chrX 144726590 144726714 -21923582 + PB1D9 SINE Alu 2 118 -2 4 1689 315 343 27 44 chrX 144727498 144727681 -21922615 - B4 SINE B4 -3 289 110 4 1689 371 345 14 27 chrX 144727754 144727900 -21922396 - RSINE1 SINE B4 -19 146 3 4 1689 258 260 13 0 chrX 144728236 144728313 -21921983 + (TTTG)n Simple_repeat Simple_repeat 3 80 0 4 1689 231 394 52 15 chrX 144728507 144728641 -21921655 - ID_B1 SINE B4 -2 222 84 4 1689 256 190 16 65 chrX 144728729 144728791 -21921505 + B4 SINE B4 15 73 -219 4 1689 533 253 109 29 chrX 144729126 144729301 -21920995 + B3 SINE B2 24 212 -4 4 1689 934 88 12 0 chrX 144730502 144730662 -21919634 + (TG)n Simple_repeat Simple_repeat 2 163 0 4 1689 355 274 8 64 chrX 144730890 144731015 -21919281 + PB1D9 SINE Alu 2 119 -1 4 1689 270 352 29 47 chrX 144731806 144731976 -21918320 - B4 SINE B4 -3 289 123 4 1689 344 359 14 27 chrX 144732062 144732208 -21918088 - RSINE1 SINE B4 -19 146 3 4 1689 217 241 16 65 chrX 144733046 144733108 -21917188 + B4 SINE B4 15 73 -219 4 1689 3931 92 2 14 chrX 144733411 144733920 -21916376 - RLTR1C LTR ERV1 0 503 1 4 1689 524 265 109 29 chrX 144733952 144734127 -21916169 + B3 SINE B2 24 212 -4 4 1689 423 0 0 0 chrX 144735333 144735380 -21914916 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1689 573 15 0 0 chrX 144735380 144735445 -21914851 + (GA)n Simple_repeat Simple_repeat 1 66 0 4 1689 293 191 9 0 chrX 144735452 144735567 -21914729 + (TG)n Simple_repeat Simple_repeat 1 116 0 4 1689 382 280 8 25 chrX 144735745 144735866 -21914430 + PB1D9 SINE Alu 2 120 0 4 1689 280 336 48 62 chrX 144736911 144737057 -21913239 - RSINE1 SINE B4 -19 146 3 4 1689 212 288 15 0 chrX 144737069 144737135 -21913161 - B4 SINE B4 -207 85 19 4 1689 200 246 18 0 chrX 144737394 144737451 -21912845 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 4 1689 227 194 0 0 chrX 144737891 144737927 -21912369 + B4 SINE B4 38 73 -219 4 1689 3580 109 16 8 chrX 144738231 144738730 -21911566 - RLTR1C LTR ERV1 0 503 1 4 1689 326 271 156 40 chrX 144738902 144739075 -21911221 + B3 SINE B2 24 216 0 4 1689 560 141 7 0 chrX 144740266 144740401 -21909895 + (TG)n Simple_repeat Simple_repeat 1 136 0 4 1689 319 291 0 57 chrX 144740630 144740754 -21909542 + PB1D9 SINE Alu 2 118 -2 4 1689 279 357 51 34 chrX 144741541 144741718 -21908578 - B4 SINE B4 -3 289 110 4 1689 275 364 32 32 chrX 144741781 144741937 -21908359 - RSINE1 SINE B4 -7 158 3 4 1689 219 282 14 0 chrX 144741957 144742028 -21908268 - B4 SINE B4 -216 76 5 4 1689 246 159 23 0 chrX 144742792 144742836 -21907460 + B4 SINE B4 29 73 -219 4 1689 3702 110 4 4 chrX 144743140 144743642 -21906654 - RLTR1C LTR ERV1 0 503 2 4 1689 541 249 114 34 chrX 144743676 144743851 -21906445 + B3 SINE B2 24 212 -4 4 1689 695 165 6 0 chrX 144745044 144745220 -21905076 + (TG)n Simple_repeat Simple_repeat 1 177 0 4 1689 382 280 8 25 chrX 144745400 144745521 -21904775 + PB1D9 SINE Alu 2 120 0 4 1689 317 298 24 47 chrX 144746354 144746481 -21903815 - B4 SINE B4 -46 246 123 4 1689 277 373 14 27 chrX 144746566 144746712 -21903584 - RSINE1 SINE B4 -19 146 3 4 1689 233 325 12 0 chrX 144746724 144746807 -21903489 - B4 SINE B4 -207 85 2 4 1689 236 224 16 65 chrX 144747520 144747582 -21902714 + B4 SINE B4 15 73 -219 4 1689 3639 108 20 4 chrX 144747886 144748381 -21901915 - RLTR1C LTR ERV1 0 503 1 4 1689 322 262 128 47 chrX 144748568 144748716 -21901580 + B3 SINE B2 57 216 0 4 1689 496 147 15 0 chrX 144749908 144750044 -21900252 + (TG)n Simple_repeat Simple_repeat 1 138 0 4 1689 319 291 0 57 chrX 144750273 144750397 -21899899 + PB1D9 SINE Alu 2 118 -2 4 1689 279 357 51 34 chrX 144751180 144751357 -21898939 - B4 SINE B4 -3 289 110 4 1689 278 364 32 32 chrX 144751420 144751576 -21898720 - RSINE1 SINE B4 -7 158 3 4 1689 219 282 14 0 chrX 144751596 144751667 -21898629 - B4 SINE B4 -216 76 5 4 1689 241 304 76 29 chrX 144752194 144752299 -21897997 - ID_B1 SINE B4 -7 217 108 4 1689 246 159 23 0 chrX 144752431 144752475 -21897821 + B4 SINE B4 29 73 -219 4 1689 3829 104 4 6 chrX 144752779 144753282 -21897014 - RLTR1C LTR ERV1 0 503 2 4 1689 511 235 123 32 chrX 144753316 144753470 -21896826 + B3 SINE B2 24 191 -25 4 1689 451 181 6 6 chrX 144754684 144754840 -21895456 + (TG)n Simple_repeat Simple_repeat 1 156 0 4 1689 382 280 8 25 chrX 144755018 144755139 -21895157 + PB1D9 SINE Alu 2 120 0 4 1689 29 47 0 0 chrX 144755275 144755318 -21894978 + AT_rich Low_complexity Low_complexity 1 43 0 4 1689 340 341 22 38 chrX 144755937 144756120 -21894176 - B4 SINE B4 -3 289 110 4 1689 465 302 35 41 chrX 144756193 144756338 -21893958 - RSINE1 SINE B4 -19 146 3 4 1689 521 126 9 0 chrX 144757506 144757617 -21892679 + (TG)n Simple_repeat Simple_repeat 1 112 0 4 1689 287 336 0 27 chrX 144757843 144757953 -21892343 + PB1D9 SINE Alu 2 108 -12 4 1689 243 0 0 0 chrX 144757956 144757983 -21892313 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1689 182 111 0 62 chrX 144758400 144758448 -21891848 + T-rich Low_complexity Low_complexity 1 45 0 4 1689 255 286 97 48 chrX 144759656 144759759 -21890537 + PB1D7 SINE Alu 3 110 -10 4 1689 1318 154 53 19 chrX 144759920 144760185 -21890111 + Lx2A1 LINE L1 6733 7006 -2 4 1689 288 274 0 27 chrX 144760247 144760322 -21889974 + tRNA-Ala-GCY_ tRNA tRNA 3 75 0 4 1689 375 229 3 21 chrX 144760322 144760333 -21889963 + ID SINE ID 9 88 -204 4 1689 2178 215 45 41 chrX 144760354 144760867 -21889429 + Lx LINE L1 6134 6648 -6 4 1689 2460 175 12 31 chrX 144760850 144761037 -21889259 + L1_Mm LINE L1 5275 5461 -422 4 1689 1216 140 64 18 chrX 144761037 144761255 -21889041 + L1_Mus3 LINE L1 6407 6634 -4 4 1689 2460 175 12 31 chrX 144761255 144761550 -21888746 + L1_Mm LINE L1 5462 5748 -135 4 1689 1931 152 26 3 chrX 144761543 144761887 -21888409 - L1_Mur2 LINE L1 -576 5301 4950 4 1689 217 279 0 29 chrX 144762250 144762320 -21887976 + (TATG)n Simple_repeat Simple_repeat 3 70 0 4 1689 517 309 7 137 chrX 144762370 144762428 -21887868 - B4 SINE B4 -26 266 217 4 1689 228 35 0 0 chrX 144762428 144762457 -21887839 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 1689 517 309 7 137 chrX 144762457 144762614 -21887682 - B4 SINE B4 -76 216 77 4 1689 350 313 105 33 chrX 144762614 144762766 -21887530 - RSINE1 SINE B4 0 165 3 4 1689 517 309 7 137 chrX 144762766 144762841 -21887455 - B4 SINE B4 -216 76 13 4 1689 21 57 0 0 chrX 144762928 144762963 -21887333 + AT_rich Low_complexity Low_complexity 1 35 0 4 1689 4096 253 34 28 chrX 144763285 144764564 -21885732 - Lx9 LINE L1 -18 7626 6184 4 1689 1035 120 0 0 chrX 144764564 144764731 -21885565 + (TA)n Simple_repeat Simple_repeat 2 168 0 4 1689 909 331 84 67 chrX 144764731 144765209 -21885087 - Lx9 LINE L1 -1290 6183 5715 4 1689 330 250 0 85 chrX 144765187 144765305 -21884991 - L1_Rod LINE L1 -1525 4322 4215 4 1689 606 274 145 4 chrX 144765515 144765757 -21884539 + Lx8 LINE L1 7196 7471 -2 4 1689 277 286 91 45 chrX 144765783 144765871 -21884425 + B3A SINE B2 25 116 -82 4 1689 504 0 0 0 chrX 144765922 144765978 -21884318 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1689 362 328 8 39 chrX 144767191 144767318 -21882978 - B1F SINE Alu -1 148 26 4 1689 589 306 61 1 chrX 144767661 144767834 -21882462 + B3A SINE B2 2 188 -28 4 1689 459 35 0 0 chrX 144767834 144767891 -21882405 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1689 583 312 82 10 chrX 144767891 144767911 -21882385 + B3 SINE B2 189 208 -8 4 1689 347 292 201 54 chrX 144768125 144768349 -21881947 + B4A SINE B4 7 263 -29 4 1689 555 16 0 0 chrX 144768388 144768452 -21881844 + (TC)n Simple_repeat Simple_repeat 2 65 0 4 1689 276 53 0 0 chrX 144768454 144768492 -21881804 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1689 207 135 37 37 chrX 144768656 144768710 -21881586 + T-rich Low_complexity Low_complexity 3 56 0 4 1689 381 342 125 0 chrX 144768847 144768999 -21881297 - ID_B1 SINE B4 -52 172 2 4 1689 216 289 0 0 chrX 144769547 144769599 -21880697 - ID4_ SINE ID -26 57 6 4 1689 643 323 57 5 chrX 144770156 144770349 -21879947 + ID_B1 SINE B4 6 208 -16 4 1689 204 225 0 0 chrX 144770663 144770703 -21879593 + GA-rich Low_complexity Low_complexity 3 42 0 4 1689 400 147 0 0 chrX 144771850 144771918 -21878378 - U3 snRNA snRNA -149 68 1 4 1689 288 260 0 0 chrX 144772221 144772298 -21877998 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 1689 707 323 34 24 chrX 144772379 144772671 -21877625 - Lx9 LINE L1 -1067 6577 6283 5 1689 6421 134 27 18 chrX 144772671 144773841 -21876455 - Lx LINE L1 -1 6653 5476 5 1689 950 139 95 0 chrX 144773839 144774060 -21876236 - L1VL2 LINE L1 -444 3470 3219 5 1689 719 78 10 0 chrX 144774060 144774163 -21876133 + (TTCC)n Simple_repeat Simple_repeat 3 106 0 5 1689 7089 96 12 3 chrX 144774653 144775633 -21874663 - L1Md_F2 LINE L1 -1 6581 5593 5 1689 12672 84 19 1 chrX 144775632 144778184 -21872112 - L1Md_F LINE L1 -2898 2985 387 5 1689 6413 143 71 10 chrX 144778186 144780151 -21870145 - L1VL2 LINE L1 -1449 2465 372 5 1689 308 284 12 12 chrX 144780532 144780614 -21869682 + B3A SINE B2 1 82 -116 5 1689 219 360 48 62 chrX 144780614 144780677 -21869619 + ID_B1 SINE B4 1 143 -81 5 1689 204 237 143 13 chrX 144781149 144781226 -21869070 + MIR3 SINE MIR 85 171 -37 5 1689 184 356 14 0 chrX 144781936 144782009 -21868287 - MIRb SINE MIR -75 193 120 5 1689 473 341 29 0 chrX 144783265 144783470 -21866826 - MLT1E2 LTR MaLR -30 597 387 5 1689 818 204 0 14 chrX 144783733 144783877 -21866419 - B1_Mus1 SINE Alu 0 148 7 5 1689 498 75 0 0 chrX 144783895 144783962 -21866334 + (GGGA)n Simple_repeat Simple_repeat 2 68 0 5 1689 258 245 0 0 chrX 144784052 144784105 -21866191 + GA-rich Low_complexity Low_complexity 4 56 0 5 1689 719 316 29 0 chrX 144784392 144784598 -21865698 + ID_B1 SINE B4 3 214 -10 5 1689 264 317 48 38 chrX 144784704 144784809 -21865487 - PB1D10 SINE Alu -35 114 9 5 1689 253 324 27 0 chrX 144784993 144785067 -21865229 - ID4 SINE ID -4 79 4 5 1689 281 93 0 18 chrX 144785446 144785501 -21864795 + (TTGG)n Simple_repeat Simple_repeat 3 56 0 5 1689 224 77 26 0 chrX 144785495 144785534 -21864762 + (TTG)n Simple_repeat Simple_repeat 1 40 0 5 1689 373 248 67 50 chrX 144785534 144785619 -21864677 - ID_B1 SINE B4 -1 223 136 5 1689 3183 61 2 0 chrX 144785619 144786014 -21864282 + MTA_Mm LTR MaLR 1 396 0 5 1689 373 248 67 50 chrX 144786014 144786047 -21864249 - ID_B1 SINE B4 -89 135 103 5 1689 251 238 25 0 chrX 144786095 144786175 -21864121 - L1MB7 LINE L1 -56 6128 6047 5 1689 185 273 0 22 chrX 144786935 144786980 -21863316 - L3 LINE CR1 -2290 2199 2156 5 1689 337 257 18 18 chrX 144787007 144787118 -21863178 + (TCTG)n Simple_repeat Simple_repeat 2 112 0 5 1689 269 348 107 0 chrX 144787142 144787254 -21863042 - B3A SINE B2 -22 176 53 5 1689 354 45 0 0 chrX 144787665 144787709 -21862587 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1689 428 214 45 60 chrX 144788404 144788538 -21861758 - ID_B1 SINE B4 0 224 93 5 1689 369 0 0 0 chrX 144789284 144789325 -21860971 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 5 1689 447 92 0 0 chrX 144789443 144789508 -21860788 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1689 594 91 117 39 chrX 144789538 144789641 -21860655 - BC1_Mm scRNA scRNA -29 123 13 5 1689 225 49 0 0 chrX 144789641 144789682 -21860614 + L1_Mus2 LINE L1 6526 6566 0 5 1689 30 0 0 0 chrX 144789682 144789712 -21860584 + AT_rich Low_complexity Low_complexity 1 30 0 5 1689 608 300 185 10 chrX 144789935 144790226 -21860070 + MTE2a LTR MaLR 1 342 -37 5 1689 341 0 45 0 chrX 144790226 144790270 -21860026 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 5 1689 916 147 0 0 chrX 144790270 144790406 -21859890 - B1_Mus2 SINE Alu -11 136 1 5 1689 340 229 34 68 chrX 144790303 144790420 -21859876 - RLTR25B LTR ERVK -526 502 390 5 1689 189 107 0 0 chrX 144790420 144790448 -21859848 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1689 1142 70 6 0 chrX 144790924 144791081 -21859215 + (TTTC)n Simple_repeat Simple_repeat 4 161 0 5 1689 3675 81 10 4 chrX 144791091 144791599 -21858697 - L1_Mus1 LINE L1 -2 6565 6055 5 1689 570 226 0 0 chrX 144791599 144791705 -21858591 - ID_B1 SINE B4 -18 206 101 5 1689 215 306 0 53 chrX 144791687 144791763 -21858533 - ID2 SINE ID -10 73 2 5 1689 34 24 0 0 chrX 144792105 144792146 -21858150 + AT_rich Low_complexity Low_complexity 1 41 0 5 1689 244 300 25 12 chrX 144792270 144792351 -21857945 + MER20 DNA MER1_type 121 202 -17 5 1689 875 117 51 127 chrX 144792733 144792951 -21857345 - B2_Mm2 SINE B2 -7 188 1 5 1689 295 288 39 85 chrX 144793001 144793130 -21857166 - RSINE1 SINE B4 -31 134 12 5 1689 484 277 41 28 chrX 144793125 144793270 -21857026 - ID_B1 SINE B4 -77 147 1 5 1689 291 295 134 70 chrX 144794524 144794666 -21855630 + MER5A DNA MER1_type 8 158 -31 5 1689 357 272 9 81 chrX 144794787 144794919 -21855377 - B3A SINE B2 -5 193 70 5 1689 307 303 109 36 chrX 144794949 144795086 -21855210 - B1F2 SINE Alu -1 148 2 5 1689 534 126 53 0 chrX 144795154 144795249 -21855047 - L1_Mur2 LINE L1 -2000 3877 3778 5 1689 235 286 24 94 chrX 144795257 144795342 -21854954 - ID4 SINE ID -2 81 3 5 1689 279 288 14 0 chrX 144795486 144795559 -21854737 + ID4_ SINE ID 7 80 -3 5 1689 424 282 81 0 chrX 144795634 144795758 -21854538 + ID_B1 SINE B4 81 214 -10 5 1689 303 268 26 18 chrX 144795797 144795911 -21854385 + PB1D10 SINE Alu 2 116 -1 5 1689 315 49 0 0 chrX 144795923 144795964 -21854332 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1689 250 217 33 16 chrX 144796367 144796428 -21853868 + BC1_Mm scRNA scRNA 22 83 -69 5 1689 284 0 28 0 chrX 144796948 144796984 -21853312 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 5 1689 314 234 61 61 chrX 144797051 144797165 -21853131 - B4A SINE B4 -173 119 6 5 1689 233 67 0 0 chrX 144797548 144797578 -21852718 - L1_Mus1 LINE L1 -680 5887 5858 5 1689 868 123 19 0 chrX 144797576 144797738 -21852558 + L1_Mm LINE L1 5254 5418 -465 5 1689 2113 147 26 98 chrX 144797741 144797876 -21852420 - L1_Mur1 LINE L1 -2340 3546 3423 5 1689 1520 134 57 18 chrX 144797876 144798158 -21852138 - Lx LINE L1 -4 6650 6358 5 1689 2113 147 26 98 chrX 144798158 144798565 -21851731 - L1_Mur1 LINE L1 -2464 3422 3043 5 1689 215 73 0 47 chrX 144798577 144798620 -21851676 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 5 1689 4500 71 2 17 chrX 144798634 144799235 -21851061 - L1Md_F2 LINE L1 -2 6580 5989 5 1689 241 347 60 20 chrX 144799402 144799502 -21850794 - B1F SINE Alu -29 120 17 5 1689 224 268 126 35 chrX 144799550 144799683 -21850613 - B1_Mm SINE Alu -2 146 3 5 1689 216 224 16 65 chrX 144799771 144799833 -21850463 + B4 SINE B4 15 73 -219 5 1689 1926 72 15 4 chrX 144800135 144800400 -21849896 - RLTR1C LTR ERV1 0 503 236 5 1689 705 10 105 48 chrX 144800399 144800504 -21849792 - RLTR1C LTR ERV1 -392 111 1 5 1689 13576 93 43 22 chrX 144800504 144802657 -21847639 - MMVL30-int LTR ERV1 0 3698 1501 5 1689 279 0 0 0 chrX 144802802 144802833 -21847463 + (TC)n Simple_repeat Simple_repeat 2 32 0 5 1689 438 20 0 0 chrX 144802833 144802883 -21847413 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1689 467 154 54 141 chrX 144802987 144803272 -21847024 - MMVL30-int LTR ERV1 -2190 1508 960 5 1689 4447 129 11 4 chrX 144803337 144804070 -21846226 - MMVL30-int LTR ERV1 -2245 1453 716 5 1689 223 193 35 17 chrX 144804401 144804459 -21845837 + (CAAA)n Simple_repeat Simple_repeat 4 62 0 5 1689 2548 180 9 35 chrX 144804497 144805044 -21845252 - MMVL30-int LTR ERV1 -7023 533 1 5 1689 3814 84 4 0 chrX 144805044 144805545 -21844751 - RLTR1C LTR ERV1 0 503 1 5 1689 283 221 59 0 chrX 144805636 144805704 -21844592 + B3 SINE B2 125 196 -20 5 1689 340 168 75 0 chrX 144805706 144805813 -21844483 + Lx2A1 LINE L1 6893 7007 -1 5 1689 335 281 60 17 chrX 144805875 144805991 -21844305 + ID_B1 SINE B4 9 129 -95 5 1689 1503 236 48 48 chrX 144805991 144806431 -21843865 + Lx LINE L1 6143 6582 -72 5 1689 214 358 26 93 chrX 144806452 144806603 -21843693 + B4A SINE B4 1 141 -151 5 1689 456 51 0 0 chrX 144806729 144806788 -21843508 + (TC)n Simple_repeat Simple_repeat 1 59 0 5 1689 270 0 0 0 chrX 144806788 144806817 -21843479 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 1689 191 36 0 35 chrX 144806979 144807008 -21843288 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 5 1689 293 288 0 0 chrX 144807049 144807115 -21843181 - ID2 SINE ID -17 66 1 5 1689 468 309 120 5 chrX 144807147 144807339 -21842957 - ID_B1 SINE B4 -9 215 2 5 1689 662 328 12 6 chrX 144808470 144808642 -21841654 + ID_B1 SINE B4 6 178 -46 5 1689 1272 93 22 11 chrX 144810681 144810865 -21839431 - B2_Mm2 SINE B2 -9 186 1 5 1689 360 149 15 0 chrX 144810913 144810980 -21839316 - U3 snRNA snRNA -149 68 1 5 1689 233 254 0 0 chrX 144811276 144811331 -21838965 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1689 532 336 24 8 chrX 144811424 144811670 -21838626 - Lx9 LINE L1 -1067 6577 6328 5 1689 8091 110 5 1 chrX 144811690 144813702 -21836594 + L1_Mus1 LINE L1 4547 6564 -3 5 1689 381 134 15 0 chrX 144815078 144815145 -21835151 - U3 snRNA snRNA -149 68 1 5 1689 263 273 0 0 chrX 144815448 144815525 -21834771 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 1689 604 306 16 5 chrX 144815606 144815800 -21834496 - Lx9 LINE L1 -1067 6577 6382 5 1689 11022 149 28 28 chrX 144815893 144817226 -21833070 - Lx LINE L1 -1 6653 5345 5 1689 657 0 0 0 chrX 144817226 144817299 -21832997 + (TTTC)n Simple_repeat Simple_repeat 4 76 0 5 1689 14602 115 17 41 chrX 144817299 144820210 -21830086 - Lx LINE L1 -542 5344 2612 5 1689 9407 80 3 36 chrX 144820206 144820987 -21829309 - L1_Mus1 LINE L1 -118 6449 5676 5 1689 2928 95 8 0 chrX 144820987 144821388 -21828908 + L1_Mus1 LINE L1 6162 6565 -2 5 1689 9407 124 6 20 chrX 144821388 144822755 -21827541 - L1_Mus1 LINE L1 -208 5675 4326 5 1689 2842 164 28 55 chrX 144822743 144823422 -21826874 - L1_Mur1 LINE L1 -2823 3063 2403 5 1689 1070 167 23 7 chrX 144823424 144823737 -21826559 - L1_Mur1 LINE L1 -4500 1386 1068 5 1689 1583 207 87 143 chrX 144823737 144824255 -21826041 + RMER19B LTR ERVK 1 489 -413 5 1689 305 287 83 118 chrX 144824766 144824995 -21825301 - MLT2B5 LTR ERVL -261 340 120 5 1689 523 293 47 42 chrX 144824872 144825064 -21825232 - MTEa LTR MaLR -165 214 22 5 1689 406 270 197 0 chrX 144825217 144825354 -21824942 + MER5A1 DNA MER1_type 1 164 -2 6 1689 191 329 23 58 chrX 144825698 144825785 -21824511 + MIRm SINE MIR 85 168 -108 6 1689 257 414 27 0 chrX 144826093 144826204 -21824092 + MLT1H1 LTR MaLR 315 428 -127 6 1689 4116 155 29 2 chrX 144826401 144827322 -21822974 - Lx5 LINE L1 -1062 5988 5024 6 1689 387 89 0 0 chrX 144827323 144827379 -21822917 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 1689 3751 217 58 6 chrX 144827383 144828241 -21822055 + Lx5 LINE L1 6148 7050 0 6 1689 369 294 118 0 chrX 144828413 144828515 -21821781 + PB1 SINE Alu 14 127 0 6 1689 1735 143 14 3 chrX 144828684 144828979 -21821317 - L1_Mus3 LINE L1 -3 6635 6338 6 1689 1247 177 4 0 chrX 144828982 144829214 -21821082 + L1_Mm LINE L1 5411 5643 -240 6 1689 378 242 158 0 chrX 144829216 144829336 -21820960 + B3 SINE B2 53 191 -25 6 1689 530 154 8 0 chrX 144830557 144830687 -21819609 + (TG)n Simple_repeat Simple_repeat 1 131 0 6 1689 387 289 0 66 chrX 144830870 144830992 -21819304 + PB1D9 SINE Alu 5 118 -2 6 1689 357 299 32 113 chrX 144831764 144831949 -21818347 - B4 SINE B4 0 292 123 6 1689 468 347 0 14 chrX 144832035 144832181 -21818115 - RSINE1 SINE B4 -19 146 3 6 1689 218 246 18 0 chrX 144832515 144832572 -21817724 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 6 1689 302 301 67 19 chrX 144832768 144832873 -21817423 - ID_B1 SINE B4 -7 217 108 6 1689 464 270 113 30 chrX 144833379 144833547 -21816749 + B3 SINE B2 24 205 -11 6 1690 2402 132 136 36 chrX 144834613 144835085 -21815211 + MURVY-LTR LTR ERV1 1 519 0 6 1690 6233 302 43 39 chrX 144835085 144838462 -21811834 + MuRRS4-int LTR ERV1 3 3494 -4062 6 1690 2624 10 0 0 chrX 144838462 144838752 -21811544 - L1Md_A LINE L1 0 6582 6293 6 1690 2597 10 17 10 chrX 144838752 144839051 -21811245 + L1Md_A LINE L1 6004 6304 -278 6 1690 6725 289 18 18 chrX 144839051 144841081 -21809215 + MuRRS4-int LTR ERV1 2243 4272 -791 6 1690 2769 121 90 33 chrX 144841372 144841861 -21808435 + MURVY-LTR LTR ERV1 1 517 -2 6 1690 787 140 0 16 chrX 144842031 144842213 -21808083 + (TG)n Simple_repeat Simple_repeat 2 180 0 6 1690 349 269 8 25 chrX 144842412 144842530 -21807766 + PB1D9 SINE Alu 5 120 0 6 1690 230 326 20 46 chrX 144843026 144843177 -21807119 - B4 SINE B4 -36 256 110 6 1690 403 317 14 27 chrX 144843295 144843441 -21806855 - RSINE1 SINE B4 -19 146 3 6 1690 5397 91 5 7 chrX 144844025 144844774 -21805522 + L1Md_F2 LINE L1 5835 6582 0 6 1690 212 167 0 0 chrX 144845007 144845043 -21805253 + B4 SINE B4 38 73 -219 6 1690 325 25 0 0 chrX 144845347 144845387 -21804909 - RLTR1C LTR ERV1 0 503 464 6 1690 306 320 31 0 chrX 144845380 144845477 -21804819 + B1F SINE Alu 29 128 -21 6 1690 237 182 54 18 chrX 144845488 144845544 -21804752 + Lx6 LINE L1 6524 6581 -879 6 1690 578 278 140 43 chrX 144845545 144845752 -21804544 + Lx5 LINE L1 6480 6706 -344 6 1690 5233 108 12 9 chrX 144846026 144846783 -21803513 - L1_Mus1 LINE L1 -2 6565 5807 6 1690 3025 120 2 9 chrX 144847045 144847595 -21802701 - L1_Mus3 LINE L1 -684 5954 5407 6 1690 1945 120 7 10 chrX 144847595 144847897 -21802399 + L1_Mus3 LINE L1 6338 6638 0 6 1690 3025 165 0 10 chrX 144847897 144847930 -21802366 - L1_Mus3 LINE L1 -477 5406 5375 6 1690 265 307 36 13 chrX 144848059 144848169 -21802127 - B1F SINE Alu -2 115 7 6 1690 3227 212 53 7 chrX 144848334 144849010 -21801286 - Lx4B LINE L1 0 7058 6352 6 1690 269 338 75 23 chrX 144849060 144849193 -21801103 - MLT1L LTR MaLR -160 450 311 6 1690 359 258 107 8 chrX 144849533 144849654 -21800642 - ID_B1 SINE B4 -91 133 1 6 1690 747 311 12 4 chrX 144849698 144849953 -21800343 - Lx7 LINE L1 -396 7300 7044 6 1690 236 296 28 75 chrX 144850739 144850845 -21799451 + MER5A DNA MER1_type 80 180 -9 6 1690 1094 90 7 0 chrX 144850908 144851052 -21799244 + B1_Mm SINE Alu 3 147 0 6 1690 500 260 32 0 chrX 144851176 144851299 -21798997 + B1F1 SINE Alu 6 132 -17 6 1690 297 0 0 0 chrX 144851308 144851341 -21798955 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 6 1690 620 238 7 7 chrX 144851701 144851845 -21798451 + B1_Mur3 SINE Alu 6 149 0 6 1690 23 54 0 0 chrX 144851845 144851882 -21798414 + AT_rich Low_complexity Low_complexity 1 37 0 6 1690 232 348 0 71 chrX 144851940 144852039 -21798257 + PB1D10 SINE Alu 24 115 -2 6 1690 319 349 0 0 chrX 144852065 144852197 -21798099 + L1MC2 LINE L1 6100 6231 -113 6 1690 489 90 90 0 chrX 144852318 144852396 -21797900 - RMER19A LTR ERVK 0 737 653 6 1690 188 125 0 59 chrX 144852439 144852490 -21797806 + (TTAA)n Simple_repeat Simple_repeat 4 51 0 6 1690 2936 41 3 0 chrX 144852554 144852899 -21797397 + ORR1A0 LTR MaLR 1 346 0 6 1690 333 316 31 0 chrX 144852993 144853091 -21797205 + B4A SINE B4 1 101 -191 6 1690 494 275 135 20 chrX 144853160 144853412 -21796884 + L1MB8 LINE L1 5742 6022 -156 6 1690 3152 49 13 0 chrX 144853522 144853911 -21796385 - MTA_Mm LTR MaLR 0 396 3 6 1690 519 295 0 0 chrX 144853915 144854054 -21796242 + ID_B1 SINE B4 86 224 0 6 1690 578 270 208 22 chrX 144854420 144854689 -21795607 + Lx8 LINE L1 7121 7439 -34 6 1690 1727 199 25 11 chrX 144854935 144855295 -21795001 - ORR1B2 LTR MaLR -2 365 1 6 1690 423 132 0 0 chrX 144855437 144855528 -21794768 + (A)n Simple_repeat Simple_repeat 1 91 0 6 1690 3672 188 62 88 chrX 144855534 144856460 -21793836 + RMER19B LTR ERVK 1 902 0 6 1690 451 233 8 33 chrX 144857863 144857983 -21792313 - ID_B1 SINE B4 -4 220 104 6 1690 839 294 0 34 chrX 144858582 144858818 -21791478 + MTEa LTR MaLR 24 251 -128 6 1690 602 145 7 101 chrX 144858880 144859018 -21791278 - URR1B DNA MER1_type -100 125 1 6 1690 673 165 91 6 chrX 144859489 144859654 -21790642 + Lx9 LINE L1 7464 7642 -2 6 1690 788 250 50 10 chrX 144859895 144860097 -21790199 + B3 SINE B2 1 210 -6 6 1690 308 309 80 14 chrX 144860133 144860271 -21790025 + ID_B1 SINE B4 70 216 -8 6 1690 585 83 0 0 chrX 144860285 144860369 -21789927 + (GA)n Simple_repeat Simple_repeat 1 84 0 6 1690 375 41 0 0 chrX 144860480 144860529 -21789767 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1690 265 300 0 59 chrX 144861125 144861210 -21789086 + ID4_ SINE ID 2 81 -2 6 1690 782 188 7 0 chrX 144861260 144861398 -21788898 + B1_Mur4 SINE Alu 5 143 -7 6 1690 234 0 0 0 chrX 144861402 144861428 -21788868 + (TA)n Simple_repeat Simple_repeat 2 27 0 6 1690 430 261 143 7 chrX 144861477 144861631 -21788665 - ID_B1 SINE B4 -47 177 3 6 1690 292 294 61 32 chrX 144861871 144862117 -21788179 + Charlie2a DNA MER1_type 1893 2145 -716 6 1690 4638 99 11 1 chrX 144864296 144864965 -21785331 + L1_Mus3 LINE L1 5959 6633 -5 6 1690 32553 81 4 3 chrX 144864973 144870199 -21780097 + L1Md_F2 LINE L1 266 5589 -297 6 1690 7880 58 2 2 chrX 144870199 144871181 -21779115 + L1Md_F2 LINE L1 5590 6571 -14 6 1690 2890 117 59 15 chrX 144871464 144871781 -21778515 + RMER17D LTR ERVK 1 322 -567 6 1690 1107 85 0 28 chrX 144871781 144871962 -21778334 + (TCTCC)n Simple_repeat Simple_repeat 2 177 0 6 1690 2890 117 59 15 chrX 144871962 144872173 -21778123 + RMER17D LTR ERVK 323 551 -338 6 1690 2804 73 0 3 chrX 144872556 144872915 -21777381 - L1_Mus1 LINE L1 0 6567 6210 6 1690 1993 129 9 9 chrX 144872916 144873259 -21777037 + RMER17D LTR ERVK 547 889 0 6 1690 404 172 0 11 chrX 144873259 144873347 -21776949 - Lx LINE L1 -12 6642 6556 6 1690 429 156 0 0 chrX 144873730 144873807 -21776489 + (CCCA)n Simple_repeat Simple_repeat 3 79 0 6 1690 195 371 50 6 chrX 144873807 144873967 -21776329 - L2a LINE L2 0 3426 3260 6 1690 552 281 213 3 chrX 144876848 144877144 -21773152 - L1MC1 LINE L1 -13 6320 5963 6 1690 21 89 0 0 chrX 144877912 144877968 -21772328 + AT_rich Low_complexity Low_complexity 1 56 0 6 1690 228 297 0 0 chrX 144878675 144878749 -21771547 + PB1D10 SINE Alu 42 115 -2 6 1690 5827 111 19 5 chrX 144878891 144880522 -21769774 - L1VL2 LINE L1 -1789 1826 172 6 1690 283 276 24 87 chrX 144880519 144880646 -21769650 - L1MC1 LINE L1 -390 5954 5836 6 1690 256 333 0 0 chrX 144880708 144880789 -21769507 - ID4_ SINE ID 0 83 3 6 1690 220 125 41 20 chrX 144880976 144881025 -21769271 + A-rich Low_complexity Low_complexity 2 51 0 6 1690 380 248 23 62 chrX 144881104 144881233 -21769063 - L1MCa LINE L1 -5875 633 510 6 1690 280 255 20 50 chrX 144881417 144881516 -21768780 - PB1 SINE Alu -3 124 29 6 1690 561 303 87 19 chrX 144881600 144881866 -21768430 - L1MCa LINE L1 -6220 288 5 6 1690 375 259 90 22 chrX 144882093 144882227 -21768069 - B1F2 SINE Alu -1 148 6 6 1690 312 263 40 0 chrX 144882367 144882466 -21767830 + MER53 DNA hAT 91 193 0 6 1690 594 41 0 0 chrX 144882654 144882727 -21767569 + (TCCC)n Simple_repeat Simple_repeat 3 75 0 6 1690 359 89 0 18 chrX 144882772 144882829 -21767467 + (TCCC)n Simple_repeat Simple_repeat 4 59 0 6 1690 300 320 15 46 chrX 144882926 144883057 -21767239 + LTR16A1 LTR ERVL 55 181 -275 6 1690 186 103 0 0 chrX 144883079 144883108 -21767188 + (TCTCCC)n Simple_repeat Simple_repeat 1 29 0 6 1690 1032 233 79 76 chrX 144883328 144883375 -21766921 + ORR1D1 LTR MaLR 1 38 -336 6 1690 1104 73 0 0 chrX 144883375 144883512 -21766784 + B1_Mus1 SINE Alu 3 139 -9 6 1690 196 53 26 26 chrX 144883512 144883551 -21766745 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1690 1032 233 79 76 chrX 144883551 144883749 -21766547 + ORR1D1 LTR MaLR 39 230 -144 6 1690 186 71 0 0 chrX 144883749 144883777 -21766519 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 6 1690 1032 233 79 76 chrX 144883777 144883896 -21766400 + ORR1D1 LTR MaLR 231 366 -8 6 1690 1773 144 0 45 chrX 144884142 144884455 -21765841 + Lx3B LINE L1 6672 6970 -3 6 1690 310 282 0 0 chrX 144884741 144884812 -21765484 + B1F SINE Alu 21 91 -58 6 1690 601 199 21 35 chrX 144884938 144885079 -21765217 + B1_Mur3 SINE Alu 5 143 -6 6 1690 402 298 20 66 chrX 144885124 144885275 -21765021 + RSINE1 SINE B4 5 148 -17 6 1690 444 37 0 0 chrX 144885285 144885339 -21764957 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 6 1690 1701 251 68 14 chrX 144885364 144885793 -21764503 - Lx6 LINE L1 -179 7281 6830 7 1690 698 291 39 0 chrX 144886109 144886312 -21763984 - ID_B1 SINE B4 -12 212 2 7 1690 2391 144 17 7 chrX 144886361 144886768 -21763528 + Lx2A LINE L1 6589 6999 -9 7 1690 273 57 0 0 chrX 144886768 144886803 -21763493 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1690 229 333 0 0 chrX 144886834 144886894 -21763402 + B3A SINE B2 48 107 -91 7 1690 339 281 26 58 chrX 144886933 144887088 -21763208 + B3 SINE B2 60 209 -7 7 1690 195 182 0 57 chrX 144888047 144888117 -21762179 + A-rich Low_complexity Low_complexity 4 69 0 7 1690 241 184 102 0 chrX 144888246 144888295 -21762001 - ID_B1 SINE B4 -17 207 154 7 1690 283 320 30 40 chrX 144888468 144888569 -21761727 + PB1D7 SINE Alu 19 118 -2 7 1690 446 252 210 8 chrX 144888573 144888697 -21761599 + B3 SINE B2 3 151 -65 7 1690 5847 25 0 0 chrX 144888838 144889551 -21760745 - L1_Mm LINE L1 -195 5688 4976 7 1690 1197 21 0 0 chrX 144889552 144889697 -21760599 + L1Md_A LINE L1 6436 6580 -2 7 1690 597 147 0 0 chrX 144889883 144889992 -21760304 + (TCTA)n Simple_repeat Simple_repeat 1 109 0 7 1690 773 258 19 15 chrX 144890006 144890211 -21760085 - ID_B1 SINE B4 -17 207 2 7 1690 341 335 63 96 chrX 144890418 144890802 -21759494 - ORR1E LTR MaLR 0 370 1 7 1690 567 326 0 7 chrX 144890933 144891081 -21759215 + B1F1 SINE Alu 1 147 -2 7 1690 371 295 18 37 chrX 144891219 144891328 -21758968 + B3A SINE B2 1 107 -91 7 1690 21 36 0 0 chrX 144891351 144891379 -21758917 + AT_rich Low_complexity Low_complexity 1 28 0 7 1690 689 354 18 4 chrX 144891415 144891642 -21758654 + B4A SINE B4 2 231 -61 7 1690 547 308 13 19 chrX 144891643 144891802 -21758494 + RSINE1 SINE B4 6 163 -2 7 1690 258 190 0 79 chrX 144891842 144891905 -21758391 + B4A SINE B4 235 292 0 7 1690 296 238 12 70 chrX 144892098 144892184 -21758112 - ID4 SINE ID 0 83 3 7 1690 286 295 95 35 chrX 144892199 144892315 -21757981 + MER58B DNA MER1_type 172 294 -47 7 1690 385 344 24 8 chrX 144892728 144892851 -21757445 - B4A SINE B4 -166 126 2 7 1690 305 286 0 16 chrX 144893398 144893494 -21756802 + ID4 SINE ID 9 102 -50 7 1690 428 202 7 118 chrX 144893650 144893785 -21756511 + MT2B LTR ERVL 145 264 -337 7 1690 765 157 0 8 chrX 144893680 144893808 -21756488 + B1_Mus2 SINE Alu 9 135 -12 7 1690 1086 100 0 0 chrX 144893809 144893989 -21756307 + (GA)n Simple_repeat Simple_repeat 1 180 0 7 1690 200 280 0 0 chrX 144894000 144894050 -21756246 + GA-rich Low_complexity Low_complexity 5 54 0 7 1690 227 235 0 19 chrX 144894058 144894110 -21756186 + B3A SINE B2 1 51 -147 7 1690 217 354 31 10 chrX 144894614 144894711 -21755585 - MIRb SINE MIR -50 218 120 7 1690 3554 134 39 23 chrX 144895400 144896475 -21753821 + RLTR13D1 LTR ERVK 1 788 -18 7 1690 532 329 28 5 chrX 144897011 144897228 -21753068 - MLT1E2 LTR MaLR -30 597 376 7 1690 581 0 14 0 chrX 144897469 144897538 -21752758 + (TTTTG)n Simple_repeat Simple_repeat 1 70 0 7 1690 814 178 0 0 chrX 144897538 144897667 -21752629 - B1_Mus1 SINE Alu -13 135 7 7 1690 585 0 0 0 chrX 144897686 144897751 -21752545 + (GGAA)n Simple_repeat Simple_repeat 2 66 0 7 1690 237 263 18 0 chrX 144897787 144897844 -21752452 + ID4_ SINE ID 24 81 -2 7 1690 227 293 40 0 chrX 144897844 144897857 -21752439 + ID_B1 SINE B4 25 97 -127 7 1690 737 302 19 0 chrX 144898196 144898401 -21751895 + ID_B1 SINE B4 3 211 -13 7 1690 222 278 90 31 chrX 144898511 144898616 -21751680 - B1F2 SINE Alu -35 114 9 7 1690 226 82 19 58 chrX 144899225 144899277 -21751019 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 7 1690 378 287 70 0 chrX 144899277 144899392 -21750904 - ID_B1 SINE B4 0 224 102 7 1690 308 327 57 106 chrX 144899404 144899650 -21750646 - L1MB8 LINE L1 -9 6169 5936 7 1690 270 203 0 30 chrX 144900343 144900409 -21749887 + (TCTCTG)n Simple_repeat Simple_repeat 5 68 0 7 1690 204 182 0 0 chrX 144900419 144900463 -21749833 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 7 1690 265 287 245 0 chrX 144900520 144900614 -21749682 - B3A SINE B2 -80 118 2 7 1690 264 268 26 90 chrX 144901284 144901362 -21748934 + RSINE1 SINE B4 92 164 -1 7 1690 612 71 0 0 chrX 144901417 144901501 -21748795 - BC1_Mm scRNA scRNA -56 96 13 7 1690 241 31 4 45 chrX 144901501 144901555 -21748741 + L1_Mus2 LINE L1 6526 6581 -1 7 1690 621 293 191 17 chrX 144901795 144902088 -21748208 + MTE2a LTR MaLR 1 344 -35 7 1690 190 27 51 51 chrX 144902088 144902127 -21748169 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 7 1690 1017 132 0 0 chrX 144902128 144902272 -21748024 - B1_Mus2 SINE Alu -3 144 1 7 1690 264 293 0 0 chrX 144902588 144902646 -21747650 - PB1D10 SINE Alu -37 80 23 7 1690 363 44 0 0 chrX 144902654 144902699 -21747597 + (CCCTG)n Simple_repeat Simple_repeat 2 46 0 7 1690 423 106 0 0 chrX 144902867 144902933 -21747363 + (TC)n Simple_repeat Simple_repeat 2 67 0 7 1690 327 282 93 8 chrX 144902935 144902948 -21747348 - B1F SINE Alu 0 149 132 7 1690 3911 71 2 2 chrX 144902948 144903459 -21746837 - L1_Mus1 LINE L1 -2 6565 6055 7 1690 327 282 93 8 chrX 144903459 144903563 -21746733 - B1F SINE Alu -18 131 22 7 1690 524 277 0 8 chrX 144903563 144903579 -21746717 - ID_B1 SINE B4 -18 206 88 7 1690 254 245 0 0 chrX 144903573 144903622 -21746674 - ID SINE ID -174 50 2 7 1690 1884 63 82 0 chrX 144903821 144904091 -21746205 - L1Md_F2 LINE L1 -526 6056 5765 7 1690 2845 108 87 46 chrX 144904857 144905354 -21744942 + MURVY-LTR LTR ERV1 1 517 -2 7 1690 253 286 15 53 chrX 144905356 144905489 -21744807 + RLTR6-int LTR ERV1 3 130 -4933 7 1690 277 246 50 17 chrX 144905528 144905648 -21744648 + RLTR6-int LTR ERV1 145 268 -7510 7 1690 3744 285 24 36 chrX 144905704 144907452 -21742844 + RLTR6-int LTR ERV1 350 2336 -5442 7 1690 4415 311 25 9 chrX 144907587 144909366 -21740930 + RLTR6-int LTR ERV1 2714 4521 -3257 7 1690 789 158 0 0 chrX 144909403 144909542 -21740754 + GA-rich Low_complexity Low_complexity 2 140 0 7 1690 2383 326 17 10 chrX 144909545 144910607 -21739689 + MuRRS4-int LTR ERV1 3207 4275 -788 7 1690 2425 141 124 34 chrX 144910879 144911355 -21738941 + MURVY-LTR LTR ERV1 1 519 0 7 1690 341 184 9 0 chrX 144911519 144911633 -21738663 + (TG)n Simple_repeat Simple_repeat 1 115 0 7 1690 305 267 25 41 chrX 144911810 144911931 -21738365 + PB1D9 SINE Alu 2 120 0 7 1690 2332 105 239 26 chrX 144912436 144912888 -21737408 + RLTR6_Mm LTR ERV1 37 584 -70 7 1690 306 331 30 48 chrX 144913300 144913468 -21736828 - B4 SINE B4 -18 274 110 7 1690 363 345 14 27 chrX 144913540 144913686 -21736610 - RSINE1 SINE B4 -19 146 3 7 1690 228 241 16 65 chrX 144914494 144914556 -21735740 + B4 SINE B4 15 73 -219 7 1690 3644 91 0 18 chrX 144914860 144915372 -21734924 - RLTR1C LTR ERV1 0 503 1 7 1690 420 306 109 29 chrX 144915405 144915580 -21734716 + B3 SINE B2 24 212 -4 7 1690 359 269 7 0 chrX 144916781 144916922 -21733374 + (TG)n Simple_repeat Simple_repeat 1 142 0 7 1690 362 294 0 56 chrX 144917083 144917209 -21733087 + PB1D9 SINE Alu 2 120 0 7 1690 284 357 51 34 chrX 144917994 144918171 -21732125 - B4 SINE B4 -3 289 110 7 1690 230 364 32 32 chrX 144918234 144918390 -21731906 - RSINE1 SINE B4 -7 158 3 7 1690 227 282 14 0 chrX 144918410 144918481 -21731815 - B4 SINE B4 -216 76 5 7 1690 247 304 76 29 chrX 144919008 144919113 -21731183 - ID_B1 SINE B4 -7 217 108 7 1690 247 159 23 0 chrX 144919244 144919288 -21731008 + B4 SINE B4 29 73 -219 7 1690 3544 106 4 6 chrX 144919592 144920095 -21730201 - RLTR1C LTR ERV1 0 503 2 7 1690 515 235 123 32 chrX 144920129 144920283 -21730013 + B3 SINE B2 24 191 -25 7 1690 469 178 6 6 chrX 144921497 144921655 -21728641 + (TG)n Simple_repeat Simple_repeat 1 158 0 7 1690 339 280 8 25 chrX 144921833 144921954 -21728342 + PB1D9 SINE Alu 2 120 0 7 1690 29 47 0 0 chrX 144922090 144922133 -21728163 + AT_rich Low_complexity Low_complexity 1 43 0 7 1690 348 341 22 38 chrX 144922752 144922935 -21727361 - B4 SINE B4 -3 289 110 7 1690 417 302 35 41 chrX 144923008 144923153 -21727143 - RSINE1 SINE B4 -19 146 3 7 1690 482 138 9 0 chrX 144924321 144924430 -21725866 + (TG)n Simple_repeat Simple_repeat 1 110 0 7 1690 253 336 0 27 chrX 144924656 144924766 -21725530 + PB1D9 SINE Alu 2 108 -12 7 1690 243 0 0 0 chrX 144924769 144924796 -21725500 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1690 251 206 0 0 chrX 144925213 144925276 -21725020 + T-rich Low_complexity Low_complexity 1 63 0 7 1690 288 282 128 60 chrX 144926468 144926585 -21723711 + PB1D7 SINE Alu 3 127 0 7 1690 1012 185 28 20 chrX 144926733 144926987 -21723309 + Lx2B LINE L1 6739 6994 -6 7 1690 287 274 0 27 chrX 144927059 144927134 -21723162 + tRNA-Ala-GCY_ tRNA tRNA 3 75 0 7 1690 373 229 3 21 chrX 144927134 144927145 -21723151 + ID SINE ID 9 88 -204 7 1690 1985 215 45 41 chrX 144927166 144927679 -21722617 + Lx LINE L1 6134 6648 -6 7 1690 2235 177 12 31 chrX 144927662 144927849 -21722447 + L1_Mm LINE L1 5275 5461 -422 7 1690 1121 140 64 18 chrX 144927849 144928067 -21722229 + L1_Mus3 LINE L1 6407 6634 -4 7 1690 2235 177 12 31 chrX 144928067 144928362 -21721934 + L1_Mm LINE L1 5462 5748 -135 7 1690 1795 149 26 3 chrX 144928355 144928699 -21721597 - L1_Mur2 LINE L1 -576 5301 4950 7 1690 217 279 0 29 chrX 144929061 144929131 -21721165 + (TATG)n Simple_repeat Simple_repeat 3 70 0 7 1690 432 314 13 132 chrX 144929260 144929419 -21720877 - B4A SINE B4 -73 219 85 7 1690 316 331 98 33 chrX 144929419 144929572 -21720724 - RSINE1 SINE B4 0 165 3 7 1690 432 314 13 132 chrX 144929572 144929647 -21720649 - B4A SINE B4 -208 84 14 7 1690 4173 269 50 37 chrX 144930094 144931976 -21718320 - Lx9 LINE L1 -22 7622 5712 8 1690 315 228 0 0 chrX 144931954 144932033 -21718263 - L1_Rod LINE L1 -1525 4322 4244 8 1690 478 274 151 4 chrX 144932282 144932520 -21717776 + Lx8 LINE L1 7196 7468 -5 8 1690 282 286 91 45 chrX 144932549 144932637 -21717659 + B3A SINE B2 25 116 -82 8 1690 396 0 0 0 chrX 144932688 144932732 -21717564 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 1690 374 328 8 39 chrX 144933946 144934073 -21716223 - B1F SINE Alu -1 148 26 8 1690 595 306 61 1 chrX 144934416 144934589 -21715707 + B3A SINE B2 2 188 -28 8 1690 405 39 0 0 chrX 144934589 144934640 -21715656 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1690 591 312 82 10 chrX 144934640 144934660 -21715636 + B3 SINE B2 189 208 -8 8 1690 355 297 201 54 chrX 144934874 144935098 -21715198 + B4A SINE B4 7 263 -29 8 1690 573 15 0 0 chrX 144935137 144935203 -21715093 + (TC)n Simple_repeat Simple_repeat 2 67 0 8 1690 276 53 0 0 chrX 144935205 144935243 -21715053 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 1690 207 135 37 37 chrX 144935407 144935461 -21714835 + T-rich Low_complexity Low_complexity 3 56 0 8 1690 395 342 125 0 chrX 144935598 144935750 -21714546 - ID_B1 SINE B4 -52 172 2 8 1690 216 289 0 0 chrX 144936298 144936350 -21713946 - ID4_ SINE ID -26 57 6 8 1690 661 318 57 5 chrX 144936907 144937100 -21713196 + ID_B1 SINE B4 6 208 -16 8 1690 218 200 0 0 chrX 144937414 144937454 -21712842 + GA-rich Low_complexity Low_complexity 3 42 0 8 1690 404 147 0 0 chrX 144938555 144938623 -21711673 - U3 snRNA snRNA -149 68 1 8 1690 288 260 0 0 chrX 144938925 144939002 -21711294 + (TG)n Simple_repeat Simple_repeat 2 78 0 8 1690 589 326 34 24 chrX 144939083 144939375 -21710921 - Lx9 LINE L1 -1067 6577 6283 8 1690 5926 134 27 18 chrX 144939375 144940545 -21709751 - Lx LINE L1 -1 6653 5476 8 1690 855 141 95 0 chrX 144940543 144940764 -21709532 - L1VL2 LINE L1 -444 3470 3219 8 1690 698 87 10 0 chrX 144940764 144940867 -21709429 + (TTCC)n Simple_repeat Simple_repeat 3 106 0 8 1690 6577 96 12 3 chrX 144941357 144942337 -21707959 - L1Md_F2 LINE L1 -1 6581 5593 8 1690 11843 81 19 1 chrX 144942336 144944888 -21705408 - L1Md_F LINE L1 -2898 2985 387 8 1690 6375 143 70 12 chrX 144944890 144946863 -21703433 - L1VL2 LINE L1 -1449 2465 372 8 1690 297 289 12 12 chrX 144947244 144947333 -21702963 + B3A SINE B2 1 89 -127 8 1690 241 353 48 62 chrX 144947333 144947389 -21702907 + ID_B1 SINE B4 1 143 -81 8 1690 204 237 143 13 chrX 144947861 144947938 -21702358 + MIR3 SINE MIR 85 171 -37 8 1690 184 356 14 0 chrX 144948648 144948721 -21701575 - MIRb SINE MIR -75 193 120 8 1690 473 341 29 0 chrX 144949977 144950182 -21700114 - MLT1E2 LTR MaLR -30 597 387 8 1690 818 204 0 14 chrX 144950445 144950589 -21699707 - B1_Mus1 SINE Alu 0 148 7 8 1690 534 70 0 0 chrX 144950607 144950678 -21699618 + (GGGA)n Simple_repeat Simple_repeat 2 72 0 8 1690 258 245 0 0 chrX 144950768 144950821 -21699475 + GA-rich Low_complexity Low_complexity 4 56 0 8 1690 719 316 29 0 chrX 144951108 144951314 -21698982 + ID_B1 SINE B4 3 214 -10 8 1690 264 317 48 38 chrX 144951420 144951525 -21698771 - PB1D10 SINE Alu -35 114 9 8 1690 253 324 27 0 chrX 144951709 144951783 -21698513 - ID4 SINE ID -4 79 4 8 1690 287 78 0 19 chrX 144952163 144952215 -21698081 + (TTTG)n Simple_repeat Simple_repeat 1 51 0 8 1690 224 77 26 0 chrX 144952211 144952250 -21698046 + (TTG)n Simple_repeat Simple_repeat 1 40 0 8 1690 373 248 67 50 chrX 144952250 144952335 -21697961 - ID_B1 SINE B4 -1 223 136 8 1690 3183 61 2 0 chrX 144952335 144952730 -21697566 + MTA_Mm LTR MaLR 1 396 0 8 1690 373 248 67 50 chrX 144952730 144952763 -21697533 - ID_B1 SINE B4 -89 135 103 8 1690 251 238 25 0 chrX 144952811 144952891 -21697405 - L1MB7 LINE L1 -56 6128 6047 8 1690 185 273 0 22 chrX 144953651 144953696 -21696600 - L3 LINE CR1 -2290 2199 2156 8 1690 337 257 18 18 chrX 144953723 144953834 -21696462 + (TCTG)n Simple_repeat Simple_repeat 2 112 0 8 1690 269 348 107 0 chrX 144953858 144953970 -21696326 - B3A SINE B2 -22 176 53 8 1690 354 45 0 0 chrX 144954381 144954425 -21695871 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 1690 410 222 45 60 chrX 144955120 144955254 -21695042 - ID_B1 SINE B4 0 224 93 8 1690 297 0 0 0 chrX 144956000 144956033 -21694263 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 8 1690 399 98 0 0 chrX 144956151 144956212 -21694084 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 1690 594 91 117 39 chrX 144956242 144956345 -21693951 - BC1_Mm scRNA scRNA -29 123 13 8 1690 225 49 0 0 chrX 144956345 144956386 -21693910 + L1_Mus2 LINE L1 6526 6566 0 8 1690 30 0 0 0 chrX 144956386 144956416 -21693880 + AT_rich Low_complexity Low_complexity 1 30 0 8 1690 606 300 185 10 chrX 144956639 144956930 -21693366 + MTE2a LTR MaLR 1 342 -37 8 1690 413 0 39 0 chrX 144956930 144956982 -21693314 + (TTTG)n Simple_repeat Simple_repeat 2 55 0 8 1690 949 132 0 0 chrX 144956982 144957118 -21693178 - B1_Mus2 SINE Alu -11 136 1 8 1690 252 122 0 0 chrX 144957118 144957159 -21693137 + (T)n Simple_repeat Simple_repeat 1 41 0 8 1690 998 78 7 0 chrX 144957634 144957775 -21692521 + (TTTC)n Simple_repeat Simple_repeat 4 145 0 8 1690 3701 79 10 4 chrX 144957785 144958293 -21692003 - L1_Mus1 LINE L1 -2 6565 6055 8 1690 570 226 0 0 chrX 144958293 144958399 -21691897 - ID_B1 SINE B4 -18 206 101 8 1690 222 306 0 53 chrX 144958381 144958457 -21691839 - ID2 SINE ID -10 73 2 8 1690 34 24 0 0 chrX 144958798 144958839 -21691457 + AT_rich Low_complexity Low_complexity 1 41 0 8 1690 244 300 25 12 chrX 144958963 144959044 -21691252 + MER20 DNA MER1_type 121 202 -17 8 1690 875 117 51 127 chrX 144959426 144959644 -21690652 - B2_Mm2 SINE B2 -7 188 1 8 1690 295 288 39 85 chrX 144959694 144959823 -21690473 - RSINE1 SINE B4 -31 134 12 8 1690 484 277 41 28 chrX 144959818 144959963 -21690333 - ID_B1 SINE B4 -77 147 1 8 1690 286 295 133 77 chrX 144961217 144961360 -21688936 + MER5A DNA MER1_type 8 158 -31 8 1690 357 272 9 81 chrX 144961481 144961613 -21688683 - B3A SINE B2 -5 193 70 8 1690 307 303 109 36 chrX 144961643 144961780 -21688516 - B1F2 SINE Alu -1 148 2 8 1690 534 126 53 0 chrX 144961848 144961943 -21688353 - L1_Mur2 LINE L1 -2000 3877 3778 8 1690 235 286 24 94 chrX 144961951 144962036 -21688260 - ID4 SINE ID -2 81 3 8 1690 279 288 14 0 chrX 144962180 144962253 -21688043 + ID4_ SINE ID 7 80 -3 8 1690 424 282 81 0 chrX 144962328 144962452 -21687844 + ID_B1 SINE B4 81 214 -10 8 1690 303 268 26 18 chrX 144962491 144962605 -21687691 + PB1D10 SINE Alu 2 116 -1 8 1690 492 48 0 0 chrX 144962617 144962680 -21687616 + (CA)n Simple_repeat Simple_repeat 2 64 0 8 1690 250 217 33 16 chrX 144963083 144963144 -21687152 + BC1_Mm scRNA scRNA 22 83 -69 8 1690 282 29 0 0 chrX 144963664 144963699 -21686597 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 1690 308 241 53 53 chrX 144963769 144963883 -21686413 - B4A SINE B4 -173 119 6 8 1690 233 67 0 0 chrX 144964266 144964296 -21686000 - L1_Mus1 LINE L1 -680 5887 5858 8 1690 868 123 19 0 chrX 144964294 144964456 -21685840 + L1_Mm LINE L1 5254 5418 -465 8 1690 2101 149 26 98 chrX 144964459 144964594 -21685702 - L1_Mur1 LINE L1 -2340 3546 3423 8 1690 1575 133 49 18 chrX 144964594 144964878 -21685418 - Lx LINE L1 -4 6650 6358 8 1690 2101 149 26 98 chrX 144964878 144965285 -21685011 - L1_Mur1 LINE L1 -2464 3422 3043 8 1690 186 0 47 93 chrX 144965298 144965341 -21684955 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 8 211 4529 69 2 17 chrX 144965355 144965956 -21684340 - L1Md_F2 LINE L1 -2 6580 5989 8 1691 241 347 60 20 chrX 144966123 144966223 -21684073 - B1F SINE Alu -29 120 17 8 1691 224 268 126 35 chrX 144966271 144966404 -21683892 - B1_Mm SINE Alu -2 146 3 8 1691 1937 68 15 4 chrX 144966856 144967121 -21683175 - RLTR1C LTR ERV1 0 503 236 8 1691 692 20 105 48 chrX 144967120 144967225 -21683071 - RLTR1C LTR ERV1 -392 111 1 8 1691 13608 93 43 22 chrX 144967225 144969378 -21680918 - MMVL30-int LTR ERV1 0 3698 1501 8 1691 351 0 0 0 chrX 144969523 144969562 -21680734 + (TC)n Simple_repeat Simple_repeat 2 40 0 8 1691 585 0 0 0 chrX 144969562 144969626 -21680670 + (TA)n Simple_repeat Simple_repeat 2 66 0 8 1691 483 151 54 141 chrX 144969730 144970015 -21680281 - MMVL30-int LTR ERV1 -2190 1508 960 8 1691 4379 132 12 4 chrX 144970080 144970812 -21679484 - MMVL30-int LTR ERV1 -2245 1453 716 8 1691 219 173 38 19 chrX 144971143 144971196 -21679100 + (CAAA)n Simple_repeat Simple_repeat 4 57 0 8 1691 2520 182 9 35 chrX 144971239 144971786 -21678510 - MMVL30-int LTR ERV1 -7023 533 1 8 1691 3755 86 4 2 chrX 144971786 144972288 -21678008 - RLTR1C LTR ERV1 0 503 1 8 1691 275 256 23 11 chrX 144972379 144972466 -21677830 + B3 SINE B2 125 212 -4 8 1691 23 0 0 0 chrX 144972700 144972723 -21677573 + AT_rich Low_complexity Low_complexity 1 23 0 8 1691 248 155 0 14 chrX 144972967 144973039 -21677257 + T-rich Low_complexity Low_complexity 4 74 0 8 1691 225 360 80 0 chrX 144974234 144974334 -21675962 + PB1D7 SINE Alu 3 110 -10 8 1691 1329 172 30 0 chrX 144974492 144974759 -21675537 + Lx2A1 LINE L1 6733 7007 -1 8 1691 335 281 60 17 chrX 144974821 144974937 -21675359 + ID_B1 SINE B4 9 129 -95 8 1691 1523 236 48 48 chrX 144974937 144975377 -21674919 + Lx LINE L1 6143 6582 -72 8 1691 226 350 26 93 chrX 144975398 144975549 -21674747 + B4A SINE B4 1 141 -151 8 1691 303 71 0 0 chrX 144975675 144975717 -21674579 + (TC)n Simple_repeat Simple_repeat 2 43 0 8 1691 396 0 0 0 chrX 144975717 144975761 -21674535 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 1691 191 36 0 35 chrX 144975923 144975952 -21674344 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 8 1691 293 288 0 0 chrX 144975993 144976059 -21674237 - ID2 SINE ID -17 66 1 8 1691 468 309 120 5 chrX 144976091 144976283 -21674013 - ID_B1 SINE B4 -9 215 2 9 1691 662 328 12 6 chrX 144977414 144977586 -21672710 + ID_B1 SINE B4 6 178 -46 9 1691 1272 93 22 11 chrX 144979621 144979805 -21670491 - B2_Mm2 SINE B2 -9 186 1 9 1691 360 149 15 0 chrX 144979853 144979920 -21670376 - U3 snRNA snRNA -149 68 1 9 1691 233 254 0 0 chrX 144980216 144980271 -21670025 + (TG)n Simple_repeat Simple_repeat 2 56 0 9 1691 532 336 24 8 chrX 144980364 144980610 -21669686 - Lx9 LINE L1 -1067 6577 6328 9 1691 8064 110 5 1 chrX 144980630 144982642 -21667654 + L1_Mus1 LINE L1 4547 6564 -3 9 1691 367 149 15 0 chrX 144984018 144984085 -21666211 - U3 snRNA snRNA -149 68 1 9 1691 263 273 0 0 chrX 144984388 144984465 -21665831 + (TG)n Simple_repeat Simple_repeat 2 78 0 9 1691 604 306 16 5 chrX 144984546 144984740 -21665556 - Lx9 LINE L1 -1067 6577 6382 9 1691 10924 150 28 28 chrX 144984833 144986166 -21664130 - Lx LINE L1 -1 6653 5345 9 1691 729 0 0 0 chrX 144986166 144986247 -21664049 + (TTTC)n Simple_repeat Simple_repeat 4 84 0 9 1691 14579 115 17 42 chrX 144986247 144989160 -21661136 - Lx LINE L1 -542 5344 2612 9 1691 9394 79 3 36 chrX 144989156 144989937 -21660359 - L1_Mus1 LINE L1 -118 6449 5676 9 1691 2898 97 8 0 chrX 144989937 144990338 -21659958 + L1_Mus1 LINE L1 6162 6565 -2 9 1691 9394 125 6 20 chrX 144990338 144991705 -21658591 - L1_Mus1 LINE L1 -208 5675 4326 9 1691 2842 164 28 55 chrX 144991693 144992372 -21657924 - L1_Mur1 LINE L1 -2823 3063 2403 9 1691 1082 167 23 3 chrX 144992374 144992685 -21657611 - L1_Mur1 LINE L1 -4500 1386 1068 9 1691 1603 205 87 143 chrX 144992685 144993203 -21657093 + RMER19B LTR ERVK 1 489 -413 9 1691 305 287 83 118 chrX 144993714 144993943 -21656353 - MLT2B5 LTR ERVL -261 340 120 9 1691 523 293 47 42 chrX 144993820 144994012 -21656284 - MTEa LTR MaLR -165 214 22 9 1691 406 270 197 0 chrX 144994165 144994302 -21655994 + MER5A1 DNA MER1_type 1 164 -2 9 1691 191 329 23 58 chrX 144994646 144994733 -21655563 + MIRm SINE MIR 85 168 -108 9 1691 257 414 27 0 chrX 144995041 144995152 -21655144 + MLT1H1 LTR MaLR 315 428 -127 9 1691 4146 153 29 2 chrX 144995349 144996270 -21654026 - Lx5 LINE L1 -1062 5988 5024 9 1691 387 89 0 0 chrX 144996271 144996327 -21653969 + (TG)n Simple_repeat Simple_repeat 1 56 0 9 1691 3692 218 62 6 chrX 144996331 144997186 -21653110 + Lx5 LINE L1 6148 7050 0 9 1691 369 294 118 0 chrX 144997358 144997460 -21652836 + PB1 SINE Alu 14 127 0 9 1691 1746 142 10 3 chrX 144997629 144997925 -21652371 - L1_Mus3 LINE L1 -3 6635 6338 9 1691 1247 177 4 0 chrX 144997928 144998160 -21652136 + L1_Mm LINE L1 5411 5643 -240 9 1691 357 250 158 0 chrX 144998162 144998282 -21652014 + B3 SINE B2 53 191 -25 9 1691 512 156 8 0 chrX 144999503 144999631 -21650665 + (TG)n Simple_repeat Simple_repeat 1 129 0 9 1691 387 289 0 66 chrX 144999814 144999936 -21650360 + PB1D9 SINE Alu 5 118 -2 9 1691 299 329 40 33 chrX 145000742 145000893 -21649403 - B4 SINE B4 -18 274 123 1 1691 418 343 0 0 chrX 145000991 145001125 -21649171 - RSINE1 SINE B4 -29 136 3 2 1691 218 246 18 0 chrX 145001459 145001516 -21648780 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 3 1691 261 301 67 19 chrX 145001712 145001817 -21648479 - ID_B1 SINE B4 -7 217 108 4 1691 464 270 113 30 chrX 145002323 145002491 -21647805 + B3 SINE B2 24 205 -11 5 1691 2379 134 136 36 chrX 145003557 145004029 -21646267 + MURVY-LTR LTR ERV1 1 519 0 6 1691 6270 301 43 39 chrX 145004029 145007406 -21642890 + MuRRS4-int LTR ERV1 3 3494 -4062 6 1691 2624 10 0 0 chrX 145007406 145007696 -21642600 - L1Md_A LINE L1 0 6582 6293 7 1691 2597 10 17 10 chrX 145007696 145007995 -21642301 + L1Md_A LINE L1 6004 6304 -278 7 1691 6742 289 18 18 chrX 145007995 145010025 -21640271 + MuRRS4-int LTR ERV1 2243 4272 -791 6 1691 2769 121 90 33 chrX 145010316 145010805 -21639491 + MURVY-LTR LTR ERV1 1 517 -2 8 1691 689 162 6 0 chrX 145010975 145011148 -21639148 + (TG)n Simple_repeat Simple_repeat 1 174 0 9 1691 349 269 8 25 chrX 145011340 145011458 -21638838 + PB1D9 SINE Alu 5 120 0 1 1691 232 326 20 46 chrX 145011954 145012105 -21638191 - B4 SINE B4 -36 256 110 1 1691 403 317 14 27 chrX 145012223 145012369 -21637927 - RSINE1 SINE B4 -19 146 3 1 1691 5281 91 13 8 chrX 145012953 145013697 -21636599 + L1Md_F2 LINE L1 5835 6582 0 1 1691 212 167 0 0 chrX 145013930 145013966 -21636330 + B4 SINE B4 38 73 -219 1 1691 317 50 0 0 chrX 145014270 145014310 -21635986 - RLTR1C LTR ERV1 0 503 464 1 1691 294 330 31 0 chrX 145014303 145014400 -21635896 + B1F SINE Alu 29 128 -21 1 1691 237 182 54 18 chrX 145014411 145014467 -21635829 + Lx6 LINE L1 6524 6581 -879 1 1691 582 291 86 45 chrX 145014468 145014666 -21635630 + Lx5 LINE L1 6480 6685 -365 1 1691 5254 107 12 8 chrX 145014949 145015705 -21634591 - L1_Mus1 LINE L1 -2 6565 5807 1 1691 3025 120 2 9 chrX 145015966 145016516 -21633780 - L1_Mus3 LINE L1 -684 5954 5407 2 1691 1974 117 7 10 chrX 145016516 145016818 -21633478 + L1_Mus3 LINE L1 6338 6638 0 2 1691 3025 165 0 10 chrX 145016818 145016851 -21633445 - L1_Mus3 LINE L1 -477 5406 5375 2 1691 272 294 36 13 chrX 145016980 145017090 -21633206 - B1F SINE Alu -2 115 7 2 1691 3217 212 53 7 chrX 145017255 145017931 -21632365 - Lx4B LINE L1 0 7058 6352 2 1691 269 338 75 23 chrX 145017981 145018114 -21632182 - MLT1L LTR MaLR -160 450 311 2 1691 359 258 107 8 chrX 145018454 145018575 -21631721 - ID_B1 SINE B4 -91 133 1 2 1691 747 311 12 4 chrX 145018619 145018874 -21631422 - Lx7 LINE L1 -396 7300 7044 2 1691 236 296 28 75 chrX 145019660 145019766 -21630530 + MER5A DNA MER1_type 80 180 -9 2 1691 1094 90 7 0 chrX 145019829 145019973 -21630323 + B1_Mm SINE Alu 3 147 0 2 1691 488 268 32 0 chrX 145020096 145020219 -21630077 + B1F1 SINE Alu 6 132 -17 2 1691 333 0 0 0 chrX 145020228 145020265 -21630031 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 3 1691 640 231 7 7 chrX 145020625 145020769 -21629527 + B1_Mur3 SINE Alu 6 149 0 3 1691 23 54 0 0 chrX 145020769 145020806 -21629490 + AT_rich Low_complexity Low_complexity 1 37 0 3 1691 232 348 0 71 chrX 145020864 145020963 -21629333 + PB1D10 SINE Alu 24 115 -2 3 1691 319 349 0 0 chrX 145020989 145021121 -21629175 + L1MC2 LINE L1 6100 6231 -113 3 1691 489 90 90 0 chrX 145021242 145021320 -21628976 - RMER19A LTR ERVK 0 737 653 3 1691 188 125 0 59 chrX 145021363 145021414 -21628882 + (TTAA)n Simple_repeat Simple_repeat 4 51 0 3 1691 2936 41 3 0 chrX 145021478 145021823 -21628473 + ORR1A0 LTR MaLR 1 346 0 3 1691 333 316 31 0 chrX 145021917 145022015 -21628281 + B4A SINE B4 1 101 -191 3 1691 491 275 135 20 chrX 145022084 145022336 -21627960 + L1MB8 LINE L1 5742 6022 -156 3 1691 3152 49 13 0 chrX 145022446 145022835 -21627461 - MTA_Mm LTR MaLR 0 396 3 4 1691 519 295 0 0 chrX 145022839 145022978 -21627318 + ID_B1 SINE B4 86 224 0 4 1691 578 270 208 22 chrX 145023344 145023613 -21626683 + Lx8 LINE L1 7121 7439 -34 4 1691 1727 199 25 11 chrX 145023859 145024219 -21626077 - ORR1B2 LTR MaLR -2 365 1 4 1691 501 115 0 0 chrX 145024361 145024457 -21625839 + (A)n Simple_repeat Simple_repeat 1 96 0 4 1691 3686 187 62 88 chrX 145024463 145025389 -21624907 + RMER19B LTR ERVK 1 902 0 4 1691 451 233 8 33 chrX 145026792 145026912 -21623384 - ID_B1 SINE B4 -4 220 104 4 1691 851 289 0 34 chrX 145027511 145027747 -21622549 + MTEa LTR MaLR 24 251 -128 4 1691 625 137 7 101 chrX 145027809 145027947 -21622349 - URR1B DNA MER1_type -100 125 1 4 1691 678 159 92 6 chrX 145028419 145028583 -21621713 + Lx9 LINE L1 7465 7642 -2 4 1691 807 245 50 10 chrX 145028824 145029026 -21621270 + B3 SINE B2 1 210 -6 5 1691 332 306 73 15 chrX 145029065 145029201 -21621095 + ID_B1 SINE B4 73 216 -8 5 1691 603 81 0 0 chrX 145029215 145029301 -21620995 + (GA)n Simple_repeat Simple_repeat 1 86 0 5 1691 354 61 0 0 chrX 145029412 145029461 -21620835 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1691 265 300 0 59 chrX 145030059 145030144 -21620152 + ID4_ SINE ID 2 81 -2 5 1691 782 188 7 0 chrX 145030194 145030332 -21619964 + B1_Mur4 SINE Alu 5 143 -7 5 1691 396 0 0 0 chrX 145030336 145030380 -21619916 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 1691 430 261 143 7 chrX 145030429 145030583 -21619713 - ID_B1 SINE B4 -47 177 3 5 1691 305 317 143 26 chrX 145030823 145031367 -21618929 + Charlie2a DNA MER1_type 1893 2500 -361 5 1691 4666 97 11 1 chrX 145033248 145033917 -21616379 + L1_Mus3 LINE L1 5959 6633 -5 5 1691 31136 81 4 3 chrX 145033925 145038975 -21611321 + L1Md_F2 LINE L1 266 5413 -473 6 1691 3005 18 3 0 chrX 145038975 145039311 -21610985 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 1691 21374 16 2 2 chrX 145039311 145041677 -21608619 - IAPEz-int LTR ERVK 0 6481 4117 6 1691 477 66 0 0 chrX 145041669 145041730 -21608566 - IAPEz-int LTR ERVK -2896 3585 3525 6 1691 922 96 24 0 chrX 145041730 145041855 -21608441 - IAPEz-int LTR ERVK -2770 4910 4783 6 1691 1890 107 4 4 chrX 145041850 145042112 -21608184 - IAPEz-int LTR ERVK -5183 2497 2236 6 1691 454 66 0 32 chrX 145042101 145042164 -21608132 - IAPEz-int LTR ERVK -5062 1419 1359 6 1691 5312 51 6 14 chrX 145042164 145042824 -21607472 - IAPEz-int LTR ERVK -5819 662 8 6 1691 2994 21 3 0 chrX 145042824 145043160 -21607136 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 1691 1485 66 0 0 chrX 145043160 145043342 -21606954 + L1Md_F2 LINE L1 5408 5589 -297 6 1691 7863 60 4 2 chrX 145043342 145044333 -21605963 + L1Md_F2 LINE L1 5590 6582 -3 6 1691 2258 122 38 63 chrX 145044605 145045282 -21605014 + RMER17D LTR ERVK 1 552 -337 6 1691 189 0 0 0 chrX 145045383 145045404 -21604892 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1691 2818 70 0 3 chrX 145045671 145046030 -21604266 - L1_Mus1 LINE L1 0 6567 6210 6 1691 1993 129 9 9 chrX 145046031 145046374 -21603922 + RMER17D LTR ERVK 547 889 0 6 1691 430 161 0 22 chrX 145046374 145046463 -21603833 - Lx LINE L1 -12 6642 6556 6 1691 429 156 0 0 chrX 145046846 145046923 -21603373 + (CCCA)n Simple_repeat Simple_repeat 3 79 0 6 1691 195 371 50 6 chrX 145046923 145047083 -21603213 - L2a LINE L2 0 3426 3260 6 1691 552 276 149 14 chrX 145049964 145050290 -21600006 - L1MC1 LINE L1 -13 6320 5937 6 1691 21 89 0 0 chrX 145051028 145051084 -21599212 + AT_rich Low_complexity Low_complexity 1 56 0 7 1691 188 35 35 0 chrX 145051117 145051146 -21599150 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 7 1691 254 284 0 0 chrX 145051794 145051868 -21598428 + PB1D10 SINE Alu 42 115 -2 7 1691 5827 110 19 5 chrX 145052010 145053641 -21596655 - L1VL2 LINE L1 -1789 1826 172 7 1691 296 267 24 87 chrX 145053638 145053765 -21596531 - L1MC1 LINE L1 -390 5954 5836 6 1691 256 333 0 0 chrX 145053827 145053908 -21596388 - ID4_ SINE ID 0 83 3 7 1691 220 125 41 20 chrX 145054093 145054142 -21596154 + A-rich Low_complexity Low_complexity 2 51 0 7 1691 381 248 23 62 chrX 145054221 145054350 -21595946 - L1MCa LINE L1 -5875 633 510 7 1691 293 262 0 35 chrX 145054534 145054621 -21595675 - PB1 SINE Alu -3 124 41 7 1691 556 306 90 16 chrX 145054727 145054983 -21595313 - L1MCa LINE L1 -6229 279 5 7 1691 367 265 89 22 chrX 145055208 145055343 -21594953 - B1F2 SINE Alu 0 149 6 7 1691 295 273 40 0 chrX 145055483 145055582 -21594714 + MER53 DNA hAT 91 193 0 7 1691 669 58 0 0 chrX 145055769 145055855 -21594441 + (TCCC)n Simple_repeat Simple_repeat 3 88 0 8 1691 353 75 0 19 chrX 145055900 145055954 -21594342 + (TCCC)n Simple_repeat Simple_repeat 3 55 0 8 1691 300 320 15 46 chrX 145056054 145056185 -21594111 + LTR16A1 LTR ERVL 55 181 -275 8 1691 186 103 0 0 chrX 145056207 145056236 -21594060 + (TCTCCC)n Simple_repeat Simple_repeat 1 29 0 8 1691 253 217 0 0 chrX 145056456 145056502 -21593794 + ORR1D1 LTR MaLR 1 46 -338 8 1691 1246 56 7 0 chrX 145056503 145056647 -21593649 + B1_Mus1 SINE Alu 3 147 -1 8 1691 1034 236 95 26 chrX 145056692 145056877 -21593419 + ORR1D1 LTR MaLR 43 231 -143 8 1691 186 71 0 0 chrX 145056877 145056905 -21593391 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 8 1691 1034 236 95 26 chrX 145056905 145057024 -21593272 + ORR1D1 LTR MaLR 232 367 -7 8 1691 1917 141 0 45 chrX 145057270 145057583 -21592713 + Lx3B LINE L1 6672 6970 -3 8 1691 338 282 0 0 chrX 145057869 145057940 -21592356 + B1F SINE Alu 21 91 -58 8 1691 661 199 21 35 chrX 145058066 145058207 -21592089 + B1_Mur3 SINE Alu 5 143 -6 8 1691 422 298 20 66 chrX 145058252 145058403 -21591893 + RSINE1 SINE B4 5 148 -17 8 1691 315 71 0 0 chrX 145058413 145058455 -21591841 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 9 1691 1669 255 68 14 chrX 145058480 145058909 -21591387 - Lx6 LINE L1 -179 7281 6830 9 1691 782 291 39 0 chrX 145059225 145059428 -21590868 - ID_B1 SINE B4 -12 212 2 9 1691 2583 139 17 7 chrX 145059477 145059884 -21590412 + Lx2A LINE L1 6589 6999 -9 9 1691 252 86 0 0 chrX 145059884 145059919 -21590377 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 9 1691 391 298 38 80 chrX 145059950 145060204 -21590092 + B3 SINE B2 48 209 -7 9 1691 237 152 0 57 chrX 145061163 145061233 -21589063 + A-rich Low_complexity Low_complexity 4 69 0 9 1691 260 184 102 0 chrX 145061362 145061411 -21588885 - ID_B1 SINE B4 -17 207 154 9 1691 275 303 36 28 chrX 145061584 145061685 -21588611 + B1F1 SINE Alu 19 118 -2 9 1691 441 252 210 8 chrX 145061689 145061813 -21588483 + B3 SINE B2 3 151 -65 9 1691 6216 27 0 0 chrX 145061954 145062667 -21587629 - L1_Mm LINE L1 -195 5688 4976 1 1691 1270 21 0 0 chrX 145062668 145062813 -21587483 + L1Md_A LINE L1 6436 6580 -2 1 1691 540 162 0 0 chrX 145063001 145063106 -21587190 + (CCTA)n Simple_repeat Simple_repeat 3 107 0 1 1691 822 262 19 15 chrX 145063118 145063323 -21586973 - ID_B1 SINE B4 -17 207 2 1 1691 192 40 0 0 chrX 145063416 145063441 -21586855 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1691 335 335 63 96 chrX 145063533 145063917 -21586379 - ORR1E LTR MaLR 0 370 1 1 1691 534 320 0 7 chrX 145064048 145064196 -21586100 + B1F1 SINE Alu 1 147 -2 1 1691 366 295 18 37 chrX 145064334 145064443 -21585853 + B3A SINE B2 1 107 -91 1 1691 21 36 0 0 chrX 145064466 145064494 -21585802 + AT_rich Low_complexity Low_complexity 1 28 0 1 1691 634 358 18 4 chrX 145064530 145064757 -21585539 + B4A SINE B4 2 231 -61 1 1691 576 289 25 19 chrX 145064758 145064917 -21585379 + RSINE1 SINE B4 6 165 0 1 1691 259 190 0 79 chrX 145064957 145065020 -21585276 + B4A SINE B4 235 292 0 1 1691 326 238 12 70 chrX 145065213 145065299 -21584997 - ID4 SINE ID 0 83 3 1 1691 277 295 95 35 chrX 145065314 145065430 -21584866 + MER58B DNA MER1_type 172 294 -47 1 1691 385 344 24 8 chrX 145065843 145065966 -21584330 - B4A SINE B4 -166 126 2 1 1691 299 283 0 16 chrX 145066513 145066609 -21583687 + ID4 SINE ID 9 102 -50 1 1691 444 193 7 118 chrX 145066765 145066900 -21583396 + MT2B LTR ERVL 145 264 -337 1 1691 770 163 15 7 chrX 145066794 145066930 -21583366 + B1_Mur4 SINE Alu 9 145 -5 1 1691 795 139 0 0 chrX 145066930 145067096 -21583200 + (GA)n Simple_repeat Simple_repeat 1 166 0 1 1691 226 235 0 19 chrX 145067149 145067201 -21583095 + B3A SINE B2 1 51 -147 1 1691 3518 132 43 15 chrX 145068497 145069576 -21580720 + RLTR13D1 LTR ERVK 1 803 0 1 1691 517 333 28 5 chrX 145070108 145070325 -21579971 - MLT1E2 LTR MaLR -30 597 376 1 1691 356 0 23 0 chrX 145070566 145070610 -21579686 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 1 1691 816 186 0 0 chrX 145070610 145070739 -21579557 - B1_Mus1 SINE Alu -13 135 7 1 1691 477 0 0 0 chrX 145070758 145070811 -21579485 + (GGAA)n Simple_repeat Simple_repeat 2 54 0 1 1691 230 263 18 0 chrX 145070847 145070904 -21579392 + ID4_ SINE ID 24 81 -2 1 1691 219 293 40 0 chrX 145070904 145070917 -21579379 + ID_B1 SINE B4 25 97 -127 1 1691 808 302 19 0 chrX 145071256 145071461 -21578835 + ID_B1 SINE B4 3 211 -13 1 1691 237 262 93 23 chrX 145071591 145071677 -21578619 - B1F2 SINE Alu -49 100 9 1 1691 226 82 19 58 chrX 145072282 145072334 -21577962 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 1 1691 355 296 70 0 chrX 145072334 145072449 -21577847 - ID_B1 SINE B4 0 224 102 1 1691 225 222 32 0 chrX 145072512 145072575 -21577721 - L1MB7 LINE L1 -73 6111 6047 1 1691 270 203 0 30 chrX 145073400 145073466 -21576830 + (TCTCTG)n Simple_repeat Simple_repeat 5 68 0 1 1691 204 182 0 0 chrX 145073476 145073520 -21576776 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 1 1691 269 287 245 0 chrX 145073577 145073671 -21576625 - B3A SINE B2 -80 118 2 1 1691 265 268 26 90 chrX 145074346 145074424 -21575872 + RSINE1 SINE B4 92 164 -1 1 1691 614 71 0 0 chrX 145074479 145074563 -21575733 - BC1_Mm scRNA scRNA -56 96 13 1 1691 264 31 4 45 chrX 145074563 145074617 -21575679 + L1_Mus2 LINE L1 6526 6581 -1 1 1691 617 293 191 17 chrX 145074857 145075150 -21575146 + MTE2a LTR MaLR 1 344 -35 1 1691 190 27 51 51 chrX 145075150 145075189 -21575107 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 1 1691 1080 132 0 0 chrX 145075190 145075334 -21574962 - B1_Mus2 SINE Alu -3 144 1 1 1691 287 276 0 0 chrX 145075650 145075708 -21574588 - PB1D10 SINE Alu -37 80 23 1 1691 408 40 0 0 chrX 145075716 145075766 -21574530 + (CCCTG)n Simple_repeat Simple_repeat 2 51 0 1 1691 513 92 0 0 chrX 145075934 145076010 -21574286 + (TC)n Simple_repeat Simple_repeat 2 77 0 1 1691 323 259 102 17 chrX 145076014 145076025 -21574271 - B1F2 SINE Alu -2 147 132 1 1691 4181 69 2 2 chrX 145076025 145076536 -21573760 - L1_Mus1 LINE L1 -2 6565 6055 1 1691 323 259 102 17 chrX 145076536 145076642 -21573654 - B1F2 SINE Alu -18 131 20 1 1691 528 277 0 8 chrX 145076642 145076656 -21573640 - ID_B1 SINE B4 -18 206 88 1 1691 254 245 0 0 chrX 145076650 145076699 -21573597 - ID SINE ID -174 50 2 1 1691 2029 62 88 0 chrX 145076898 145077172 -21573124 - L1Md_F2 LINE L1 -526 6056 5759 1 1691 3071 108 87 46 chrX 145077934 145078431 -21571865 + MURVY-LTR LTR ERV1 1 517 -2 1 1691 339 290 37 65 chrX 145078433 145078725 -21571571 + RLTR6-int LTR ERV1 3 268 -7510 1 1691 4205 286 24 36 chrX 145078772 145080529 -21569767 + RLTR6-int LTR ERV1 343 2336 -5442 1 1691 5081 312 33 31 chrX 145080664 145083678 -21566618 + RLTR6-int LTR ERV1 2632 5290 -2311 1 1691 2626 143 124 34 chrX 145083950 145084426 -21565870 + MURVY-LTR LTR ERV1 1 519 0 1 1691 341 184 9 0 chrX 145084590 145084704 -21565592 + (TG)n Simple_repeat Simple_repeat 1 115 0 1 1691 330 261 16 73 chrX 145084881 145085005 -21565291 + PB1D9 SINE Alu 2 118 -2 1 1691 2342 100 241 29 chrX 145085507 145085959 -21564337 + RLTR6_Mm LTR ERV1 37 584 -70 1 1691 362 291 42 60 chrX 145086372 145086540 -21563756 - B4 SINE B4 -18 274 110 1 1691 278 362 20 34 chrX 145086613 145086759 -21563537 - RSINE1 SINE B4 -19 146 3 1 1691 366 129 0 0 chrX 145086864 145086926 -21563370 + (A)n Simple_repeat Simple_repeat 1 62 0 1 1691 234 330 67 19 chrX 145087388 145087493 -21562803 - ID_B1 SINE B4 -7 217 108 1 1691 265 111 0 0 chrX 145087631 145087667 -21562629 + B4 SINE B4 38 73 -219 1 1691 3632 111 18 4 chrX 145087974 145088470 -21561826 - RLTR1C LTR ERV1 0 503 1 1 1691 481 245 159 0 chrX 145088503 145088666 -21561630 + B3 SINE B2 24 212 -4 1 1691 410 197 7 0 chrX 145089879 145090016 -21560280 + (TG)n Simple_repeat Simple_repeat 1 138 0 1 1691 349 299 17 25 chrX 145090206 145090326 -21559970 + PB1D9 SINE Alu 2 120 0 1 1691 25 0 0 0 chrX 145090464 145090489 -21559807 + AT_rich Low_complexity Low_complexity 1 25 0 1 1691 324 298 24 47 chrX 145091169 145091296 -21559000 - B4 SINE B4 -46 246 123 1 1691 253 387 14 27 chrX 145091382 145091528 -21558768 - RSINE1 SINE B4 -19 146 3 1 1691 296 301 67 19 chrX 145092148 145092253 -21558043 - ID_B1 SINE B4 -7 217 108 1 1691 223 322 131 8 chrX 145092253 145092270 -21558026 - B1_Mus1 SINE Alu -7 141 5 1 1691 272 163 20 0 chrX 145092378 145092427 -21557869 + B4 SINE B4 24 73 -219 1 1691 515 242 123 32 chrX 145092750 145092904 -21557392 + B3 SINE B2 24 191 -25 1 1691 478 140 18 0 chrX 145094111 145094225 -21556071 + (TG)n Simple_repeat Simple_repeat 2 117 0 1 1691 355 274 8 64 chrX 145094453 145094578 -21555718 + PB1D9 SINE Alu 2 119 -1 1 1691 308 298 24 47 chrX 145095415 145095542 -21554754 - B4 SINE B4 -46 246 123 1 1691 311 366 14 27 chrX 145095628 145095774 -21554522 - RSINE1 SINE B4 -19 146 3 1 1691 234 325 12 0 chrX 145095786 145095869 -21554427 - B4 SINE B4 -207 85 2 1 1691 210 241 16 65 chrX 145096580 145096642 -21553654 + B4 SINE B4 15 73 -219 1 1692 3928 95 0 4 chrX 145096946 145097451 -21552845 - RLTR1C LTR ERV1 0 503 1 1 1692 326 271 156 40 chrX 145097611 145097784 -21552512 + B3 SINE B2 24 216 0 1 1692 282 143 0 0 chrX 145098974 145099037 -21551259 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 1692 351 282 0 57 chrX 145099292 145099416 -21550880 + PB1D9 SINE Alu 2 118 -2 1 1692 292 351 51 34 chrX 145100197 145100374 -21549922 - B4 SINE B4 -3 289 110 1 1692 298 358 32 32 chrX 145100437 145100593 -21549703 - RSINE1 SINE B4 -7 158 3 1 1692 230 304 76 29 chrX 145101215 145101320 -21548976 - ID_B1 SINE B4 -7 217 108 1 1692 243 207 16 65 chrX 145101432 145101494 -21548802 + B4 SINE B4 15 73 -219 1 1692 3840 102 4 4 chrX 145101798 145102300 -21547996 - RLTR1C LTR ERV1 0 503 2 1 1692 478 260 115 29 chrX 145102334 145102508 -21547788 + B3 SINE B2 24 212 -4 1 1692 668 111 8 0 chrX 145103702 145103828 -21546468 + (TG)n Simple_repeat Simple_repeat 1 127 0 1 1692 363 287 8 25 chrX 145104052 145104170 -21546126 + PB1D9 SINE Alu 5 120 0 1 1692 31 44 0 0 chrX 145104308 145104353 -21545943 + AT_rich Low_complexity Low_complexity 1 45 0 1 1692 447 19 0 0 chrX 145104865 145104917 -21545379 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1692 347 341 22 38 chrX 145105010 145105193 -21545103 - B4 SINE B4 -3 289 110 1 1692 435 314 28 35 chrX 145105266 145105411 -21544885 - RSINE1 SINE B4 -19 146 3 1 1692 644 107 8 0 chrX 145106597 145106718 -21543578 + (TG)n Simple_repeat Simple_repeat 1 122 0 1 1692 314 322 8 25 chrX 145106944 145107065 -21543231 + PB1D9 SINE Alu 2 120 0 1 1692 381 122 0 0 chrX 145107496 145107570 -21542726 + (T)n Simple_repeat Simple_repeat 1 74 0 1 1692 259 297 68 19 chrX 145108764 145108867 -21541429 + PB1D7 SINE Alu 3 110 -10 1 1692 1280 173 33 29 chrX 145109027 145109301 -21540995 + Lx2A1 LINE L1 6733 7007 -1 1 1692 312 260 0 27 chrX 145109352 145109427 -21540869 + tRNA-Ala-GCY_ tRNA tRNA 3 75 0 1 1692 397 218 3 21 chrX 145109427 145109438 -21540858 + ID SINE ID 9 88 -204 1 1692 2359 203 43 31 chrX 145109459 145109967 -21540329 + Lx LINE L1 6134 6647 -7 1 1692 2484 172 25 27 chrX 145109948 145110135 -21540161 + L1_Mm LINE L1 5267 5459 -424 1 1692 1296 125 63 23 chrX 145110135 145110356 -21539940 + L1_Mus3 LINE L1 6405 6634 -4 2 1692 2484 172 25 27 chrX 145110356 145110651 -21539645 + L1_Mm LINE L1 5460 5748 -135 1 1692 1930 149 31 3 chrX 145110644 145110994 -21539302 - L1_Mur2 LINE L1 -576 5301 4942 2 1692 205 315 0 33 chrX 145111358 145111450 -21538846 + (TATATG)n Simple_repeat Simple_repeat 3 91 0 2 1692 479 333 7 116 chrX 145111478 145111529 -21538767 - B4 SINE B4 -26 266 217 2 1692 212 0 36 0 chrX 145111529 145111557 -21538739 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1692 499 333 7 116 chrX 145111557 145111714 -21538582 - B4 SINE B4 -76 216 77 2 1692 316 331 98 33 chrX 145111714 145111867 -21538429 - RSINE1 SINE B4 0 165 3 2 1692 499 333 7 116 chrX 145111867 145111942 -21538354 - B4 SINE B4 -216 76 13 2 1692 4096 270 47 45 chrX 145112389 145114292 -21536004 - Lx9 LINE L1 -22 7622 5712 2 1692 285 253 0 0 chrX 145114270 145114349 -21535947 - L1_Rod LINE L1 -1525 4322 4244 2 1692 469 274 151 4 chrX 145114598 145114836 -21535460 + Lx8 LINE L1 7196 7468 -5 2 1692 282 286 91 45 chrX 145114865 145114953 -21535343 + B3A SINE B2 25 116 -82 2 1692 561 15 0 0 chrX 145115004 145115070 -21535226 + (TG)n Simple_repeat Simple_repeat 1 66 0 2 1692 395 334 9 36 chrX 145116284 145116424 -21533872 - B1F SINE Alu -1 148 13 2 1692 591 307 82 10 chrX 145116753 145116926 -21533370 + B3 SINE B2 2 188 -28 2 1692 387 41 0 0 chrX 145116926 145116975 -21533321 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1692 591 307 82 10 chrX 145116975 145116995 -21533301 + B3 SINE B2 189 208 -8 2 1692 348 318 142 69 chrX 145117200 145117433 -21532863 + B4A SINE B4 14 263 -29 2 1692 645 14 0 0 chrX 145117472 145117546 -21532750 + (TC)n Simple_repeat Simple_repeat 2 75 0 2 1692 258 56 0 0 chrX 145117548 145117584 -21532712 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1692 207 135 37 37 chrX 145117748 145117802 -21532494 + T-rich Low_complexity Low_complexity 3 56 0 2 1692 255 276 0 0 chrX 145117810 145117868 -21532428 - ID4_ SINE ID -17 66 9 2 1692 408 335 125 0 chrX 145117939 145118091 -21532205 - ID_B1 SINE B4 -52 172 2 2 1692 216 289 0 0 chrX 145118638 145118690 -21531606 - ID4_ SINE ID -26 57 6 2 1692 573 311 109 5 chrX 145119246 145119430 -21530866 + ID_B1 SINE B4 6 208 -16 2 1692 218 200 0 0 chrX 145119744 145119784 -21530512 + GA-rich Low_complexity Low_complexity 3 42 0 2 1692 404 147 0 0 chrX 145120933 145121001 -21529295 - U3 snRNA snRNA -149 68 1 2 1692 288 260 0 0 chrX 145121304 145121381 -21528915 + (TG)n Simple_repeat Simple_repeat 2 78 0 2 1692 603 323 34 24 chrX 145121462 145121754 -21528542 - Lx9 LINE L1 -1067 6577 6283 2 1692 5922 136 27 16 chrX 145121754 145122922 -21527374 - Lx LINE L1 -1 6653 5476 2 1692 774 148 97 6 chrX 145122920 145123138 -21527158 - L1VL2 LINE L1 -444 3470 3219 2 1692 650 75 11 0 chrX 145123140 145123233 -21527063 + (TTCC)n Simple_repeat Simple_repeat 3 96 0 2 1692 6565 97 12 3 chrX 145123723 145124703 -21525593 - L1Md_F2 LINE L1 -1 6581 5593 2 1692 11711 84 21 0 chrX 145124702 145127249 -21523047 - L1Md_F LINE L1 -2898 2985 387 2 1692 6305 138 82 9 chrX 145127251 145129192 -21521104 - L1VL2 LINE L1 -1449 2465 372 2 1692 297 289 12 12 chrX 145129573 145129662 -21520634 + B3A SINE B2 1 89 -127 2 1692 241 353 48 62 chrX 145129662 145129718 -21520578 + ID_B1 SINE B4 1 143 -81 2 1692 223 224 143 13 chrX 145130190 145130267 -21520029 + MIR3 SINE MIR 85 171 -37 2 1692 190 356 14 0 chrX 145130976 145131049 -21519247 - MIRb SINE MIR -75 193 120 2 1692 473 341 29 0 chrX 145132305 145132510 -21517786 - MLT1E2 LTR MaLR -30 597 387 2 1692 782 206 7 14 chrX 145132773 145132916 -21517380 - B1_Mus1 SINE Alu 0 148 7 2 1692 785 107 8 0 chrX 145132933 145133055 -21517241 + (GGAA)n Simple_repeat Simple_repeat 4 126 0 2 1692 239 226 0 19 chrX 145133146 145133200 -21517096 + GA-rich Low_complexity Low_complexity 4 56 0 2 1692 718 320 29 0 chrX 145133486 145133692 -21516604 + ID_B1 SINE B4 3 214 -10 2 1692 227 303 39 48 chrX 145133798 145133819 -21516477 - ID_B1 SINE B4 -32 192 90 2 1692 251 301 36 0 chrX 145133819 145133902 -21516394 - PB1D10 SINE Alu -23 94 9 2 1692 254 326 61 0 chrX 145133956 145134054 -21516242 - B1F SINE Alu -37 112 9 2 1692 264 324 27 0 chrX 145134086 145134160 -21516136 - ID4 SINE ID -4 79 4 2 1692 296 64 21 0 chrX 145134565 145134612 -21515684 + (TTG)n Simple_repeat Simple_repeat 2 49 0 2 1692 376 236 69 52 chrX 145134613 145134695 -21515601 - ID_B1 SINE B4 -4 220 136 2 1692 3314 48 2 0 chrX 145134695 145135090 -21515206 + MTA_Mm LTR MaLR 1 396 0 2 1692 376 236 69 52 chrX 145135090 145135123 -21515173 - ID_B1 SINE B4 -89 135 103 2 1692 233 250 25 0 chrX 145135171 145135251 -21515045 - L1MB7 LINE L1 -56 6128 6047 2 1692 185 273 0 22 chrX 145136017 145136062 -21514234 - L3 LINE CR1 -2290 2199 2156 2 1692 331 248 19 19 chrX 145136089 145136196 -21514100 + (TCTG)n Simple_repeat Simple_repeat 2 108 0 2 1692 269 348 107 0 chrX 145136220 145136332 -21513964 - B3A SINE B2 -22 176 53 2 1692 696 45 0 0 chrX 145136742 145136830 -21513466 + (TG)n Simple_repeat Simple_repeat 2 89 0 2 1692 436 206 45 60 chrX 145137525 145137659 -21512637 - ID_B1 SINE B4 0 224 93 2 1692 261 0 0 0 chrX 145138404 145138433 -21511863 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2 1692 282 116 0 0 chrX 145138551 145138594 -21511702 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1692 584 120 130 0 chrX 145138619 145138727 -21511569 - BC1_Mm scRNA scRNA -18 134 13 2 1692 40 21 0 0 chrX 145138750 145138797 -21511499 + AT_rich Low_complexity Low_complexity 1 47 0 2 1692 595 300 185 10 chrX 145139021 145139312 -21510984 + MTE2a LTR MaLR 1 342 -37 2 1692 305 0 50 0 chrX 145139312 145139352 -21510944 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 2 1692 902 147 0 0 chrX 145139352 145139488 -21510808 - B1_Mus2 SINE Alu -11 136 1 2 1692 304 248 34 68 chrX 145139385 145139502 -21510794 - RLTR25B LTR ERVK -526 502 390 2 1692 1047 120 0 0 chrX 145140003 145140170 -21510126 + (TTTC)n Simple_repeat Simple_repeat 3 169 0 2 1692 3743 75 10 4 chrX 145140175 145140683 -21509613 - L1_Mus1 LINE L1 -2 6565 6055 2 1692 560 249 0 14 chrX 145140683 145140847 -21509449 - ID_B1 SINE B4 -18 206 2 2 1692 34 24 0 0 chrX 145141188 145141229 -21509067 + AT_rich Low_complexity Low_complexity 1 41 0 2 1692 244 300 25 12 chrX 145141353 145141434 -21508862 + MER20 DNA MER1_type 121 202 -17 2 1692 902 126 49 120 chrX 145141816 145142037 -21508259 - B2_Mm2 SINE B2 -7 188 1 2 1692 281 288 39 85 chrX 145142087 145142216 -21508080 - RSINE1 SINE B4 -31 134 12 2 1692 474 300 50 0 chrX 145142211 145142351 -21507945 - ID_B1 SINE B4 -77 147 1 2 1692 347 319 67 60 chrX 145143610 145143760 -21506536 + MER5A DNA MER1_type 8 158 -31 2 1692 357 272 9 81 chrX 145143881 145144013 -21506283 - B3A SINE B2 -5 193 70 2 1692 303 297 153 23 chrX 145144048 145144179 -21506117 - B1F2 SINE Alu 0 149 2 2 1692 534 126 53 0 chrX 145144247 145144342 -21505954 - L1_Mur2 LINE L1 -2000 3877 3778 2 1692 237 299 24 94 chrX 145144350 145144435 -21505861 - ID4 SINE ID -2 81 3 2 1692 279 288 14 0 chrX 145144579 145144652 -21505644 + ID4_ SINE ID 7 80 -3 2 1692 445 274 81 0 chrX 145144727 145144851 -21505445 + ID_B1 SINE B4 81 214 -10 2 1692 277 277 26 18 chrX 145144890 145145004 -21505292 + PB1D10 SINE Alu 2 116 -1 2 1692 501 58 0 0 chrX 145145016 145145085 -21505211 + (CA)n Simple_repeat Simple_repeat 2 70 0 2 1692 250 217 33 16 chrX 145145489 145145550 -21504746 + BC1_Mm scRNA scRNA 22 83 -69 2 1692 219 36 0 0 chrX 145146082 145146110 -21504186 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 1692 299 239 51 61 chrX 145146195 145146293 -21504003 - B4A SINE B4 -190 102 6 2 1692 245 33 0 0 chrX 145146678 145146708 -21503588 - L1_Mus1 LINE L1 -680 5887 5858 2 1692 867 113 7 0 chrX 145146706 145146857 -21503439 + L1_Mm LINE L1 5254 5405 -478 2 1692 2142 149 26 88 chrX 145146871 145147006 -21503290 - L1_Mur1 LINE L1 -2340 3546 3423 2 1692 1583 129 49 21 chrX 145147006 145147291 -21503005 - Lx LINE L1 -4 6650 6358 2 1692 2142 149 26 88 chrX 145147291 145147692 -21502604 - L1_Mur1 LINE L1 -2464 3422 3043 2 1692 42 36 0 0 chrX 145147703 145147759 -21502537 + AT_rich Low_complexity Low_complexity 1 56 0 2 1692 4510 71 2 10 chrX 145147763 145148357 -21501939 - L1Md_F2 LINE L1 -5 6577 5989 2 1692 234 243 83 28 chrX 145148524 145148596 -21501700 - B1F SINE Alu -29 120 45 2 1692 242 207 16 65 chrX 145148893 145148955 -21501341 + B4 SINE B4 15 73 -219 2 1692 1937 75 8 4 chrX 145149257 145149524 -21500772 - RLTR1C LTR ERV1 0 503 236 2 1692 677 20 105 48 chrX 145149523 145149628 -21500668 - RLTR1C LTR ERV1 -392 111 1 2 1692 13650 90 47 22 chrX 145149628 145151773 -21498523 - MMVL30-int LTR ERV1 0 3698 1501 2 1692 297 0 0 0 chrX 145151918 145151951 -21498345 + (TC)n Simple_repeat Simple_repeat 2 34 0 2 1692 279 0 0 0 chrX 145151951 145151981 -21498315 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 1692 483 151 54 141 chrX 145152085 145152370 -21497926 - MMVL30-int LTR ERV1 -2190 1508 960 2 1692 4541 129 4 4 chrX 145152435 145153173 -21497123 - MMVL30-int LTR ERV1 -2245 1453 716 2 1692 202 213 0 21 chrX 145153503 145153551 -21496745 + (CAGA)n Simple_repeat Simple_repeat 3 49 0 2 1692 2582 178 9 35 chrX 145153594 145154141 -21496155 - MMVL30-int LTR ERV1 -7023 533 1 2 1692 3828 86 2 4 chrX 145154141 145154645 -21495651 - RLTR1C LTR ERV1 0 503 1 2 1692 269 299 11 0 chrX 145154736 145154823 -21495473 + B3 SINE B2 125 212 -4 2 1692 23 0 0 0 chrX 145155057 145155080 -21495216 + AT_rich Low_complexity Low_complexity 1 23 0 2 1692 285 100 0 0 chrX 145155326 145155376 -21494920 + (T)n Simple_repeat Simple_repeat 1 50 0 2 1692 255 369 48 0 chrX 145156581 145156684 -21493612 + PB1D7 SINE Alu 3 110 -10 2 1692 1299 172 30 0 chrX 145156845 145157112 -21493184 + Lx2A1 LINE L1 6733 7007 -1 2 1692 331 281 60 17 chrX 145157178 145157294 -21493002 + ID_B1 SINE B4 9 129 -95 2 1692 1554 234 48 48 chrX 145157294 145157734 -21492562 + Lx LINE L1 6143 6582 -72 3 1692 651 48 0 0 chrX 145158032 145158115 -21492181 + (TC)n Simple_repeat Simple_repeat 1 83 0 3 1692 196 30 0 57 chrX 145158297 145158332 -21491964 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 3 1692 268 303 0 0 chrX 145158367 145158433 -21491863 - ID2 SINE ID -17 66 1 3 1692 499 299 120 5 chrX 145158465 145158657 -21491639 - ID_B1 SINE B4 -9 215 2 3 1692 605 345 12 6 chrX 145159792 145159964 -21490332 + ID_B1 SINE B4 6 178 -46 3 1692 229 200 0 0 chrX 145160301 145160341 -21489955 + GA-rich Low_complexity Low_complexity 3 42 0 3 1692 1283 93 22 11 chrX 145161997 145162181 -21488115 - B2_Mm2 SINE B2 -9 186 1 3 1692 367 149 15 0 chrX 145162229 145162296 -21488000 - U3 snRNA snRNA -149 68 1 3 1692 192 241 0 0 chrX 145162597 145162676 -21487620 + (TG)n Simple_repeat Simple_repeat 2 80 0 3 1692 479 344 24 8 chrX 145162772 145163018 -21487278 - Lx9 LINE L1 -1067 6577 6328 3 1692 8055 114 5 1 chrX 145163038 145165049 -21485247 + L1_Mus1 LINE L1 4547 6564 -3 3 1692 35510 46 0 3 chrX 145165173 145170382 -21479914 + L1Md_Gf LINE L1 243 5531 -355 3 1692 9845 32 0 0 chrX 145170383 145171506 -21478790 - MERVL-int LTR ERVL -672 4813 3691 3 1692 465 91 99 0 chrX 145171506 145171580 -21478716 + L1Md_T LINE L1 5496 5586 -297 3 1692 8894 41 0 1 chrX 145171580 145172577 -21477719 + L1Md_T LINE L1 5587 6582 0 3 1692 361 149 15 0 chrX 145173823 145173890 -21476406 - U3 snRNA snRNA -149 68 1 3 1692 288 260 0 0 chrX 145174193 145174270 -21476026 + (TG)n Simple_repeat Simple_repeat 2 78 0 3 1692 683 326 34 24 chrX 145174351 145174643 -21475653 - Lx9 LINE L1 -1067 6577 6283 3 1692 16503 136 26 29 chrX 145174643 145175977 -21474319 - Lx LINE L1 -1 6653 5342 3 1692 549 0 0 0 chrX 145175977 145176038 -21474258 + (TTTC)n Simple_repeat Simple_repeat 4 64 0 3 1692 16503 149 18 81 chrX 145176038 145178954 -21471342 - Lx LINE L1 -542 5341 2612 3 1692 10321 91 2 36 chrX 145178950 145179732 -21470564 - L1_Mus1 LINE L1 -118 6449 5676 3 1692 3227 85 8 0 chrX 145179732 145180134 -21470162 + L1_Mus1 LINE L1 6162 6566 -1 3 1692 10321 124 2 21 chrX 145180134 145181510 -21468786 - L1_Mus1 LINE L1 -208 5675 4326 3 1692 3168 168 26 54 chrX 145181488 145182178 -21468118 - L1_Mur1 LINE L1 -2813 3073 2403 3 1692 1230 171 22 0 chrX 145182176 145182489 -21467807 - L1_Mur1 LINE L1 -4496 1390 1068 3 1692 1573 209 87 143 chrX 145182489 145183007 -21467289 + RMER19B LTR ERVK 1 489 -413 3 1692 569 271 65 60 chrX 145183616 145183816 -21466480 - MTEa LTR MaLR -157 222 22 3 1692 423 237 114 0 chrX 145183992 145184106 -21466190 + MER5A1 DNA MER1_type 38 164 -2 3 1692 183 329 23 58 chrX 145184450 145184537 -21465759 + MIRm SINE MIR 85 168 -108 3 1692 242 344 21 11 chrX 145184696 145184790 -21465506 + MLT1H1 LTR MaLR 159 253 -326 3 1692 289 391 46 15 chrX 145184845 145184975 -21465321 + MLT1H1 LTR MaLR 315 448 -107 3 1692 4436 155 31 2 chrX 145185153 145186073 -21464223 - Lx5 LINE L1 -1062 5988 5024 3 1692 291 114 0 0 chrX 145186074 145186118 -21464178 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1692 4070 213 58 6 chrX 145186122 145186980 -21463316 + Lx5 LINE L1 6148 7050 0 3 1692 340 304 118 0 chrX 145187152 145187254 -21463042 + PB1 SINE Alu 14 127 0 3 1692 1980 126 10 10 chrX 145187423 145187721 -21462575 - L1_Mus3 LINE L1 -3 6635 6338 3 1692 1403 172 0 0 chrX 145187724 145187957 -21462339 + L1_Mm LINE L1 5411 5643 -240 3 1692 382 233 158 0 chrX 145187959 145188079 -21462217 + B3 SINE B2 53 191 -25 3 1692 2654 125 136 36 chrX 145189162 145189634 -21460662 + MURVY-LTR LTR ERV1 1 519 0 3 1692 10683 300 49 45 chrX 145189634 145195048 -21455248 + RLTR6-int LTR ERV1 3 5646 -2132 3 1692 2986 118 90 33 chrX 145195338 145195827 -21454469 + MURVY-LTR LTR ERV1 1 517 -2 3 1692 883 117 6 11 chrX 145195997 145196178 -21454118 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1692 354 287 8 25 chrX 145196370 145196488 -21453808 + PB1D9 SINE Alu 5 120 0 3 1692 297 326 20 46 chrX 145196990 145197141 -21453155 - B4 SINE B4 -36 256 110 3 1692 406 338 14 27 chrX 145197259 145197405 -21452891 - RSINE1 SINE B4 -19 146 3 3 1692 215 288 15 0 chrX 145197417 145197483 -21452813 - B4 SINE B4 -207 85 19 3 1692 6011 71 5 5 chrX 145197990 145198738 -21451558 + L1Md_F2 LINE L1 5835 6582 0 3 1692 234 333 79 53 chrX 145199291 145199310 -21450986 + ID SINE ID 49 73 -151 3 1692 349 0 0 0 chrX 145199310 145199350 -21450946 - RLTR1C LTR ERV1 0 503 464 3 1692 331 350 8 16 chrX 145199343 145199465 -21450831 + B1F SINE Alu 29 149 0 3 1692 234 333 79 53 chrX 145199350 145199443 -21450853 + ID_B1 SINE B4 74 204 -20 3 1692 559 289 87 46 chrX 145199508 145199704 -21450592 + Lx5 LINE L1 6480 6683 -367 3 1692 5586 103 14 13 chrX 145199987 145200746 -21449550 - L1_Mus1 LINE L1 -1 6566 5807 3 1692 234 307 0 13 chrX 145200746 145200814 -21449482 - L1MC5 LINE L1 -61 7900 7834 3 1692 3015 117 2 8 chrX 145201008 145201558 -21448738 - L1_Mus3 LINE L1 -684 5954 5407 3 1692 2070 125 7 3 chrX 145201558 145201855 -21448441 + L1_Mus3 LINE L1 6338 6635 -3 3 1692 307 318 18 27 chrX 145202012 145202122 -21448174 - PB1D10 SINE Alu -2 115 7 3 1692 3192 216 79 4 chrX 145202287 145202971 -21447325 - Lx5 LINE L1 0 7050 6316 3 1692 323 333 78 21 chrX 145203005 145203146 -21447150 - MLT1L LTR MaLR -151 459 311 3 1692 398 267 107 8 chrX 145203485 145203606 -21446690 - ID_B1 SINE B4 -91 133 1 3 1692 790 303 12 8 chrX 145203650 145203906 -21446390 - Lx7 LINE L1 -396 7300 7044 3 1692 288 310 32 90 chrX 145204604 145204792 -21445504 + MER5A DNA MER1_type 4 180 -9 3 1692 1176 96 0 0 chrX 145204854 145205000 -21445296 + B1_Mm SINE Alu 2 147 0 3 1692 547 260 32 0 chrX 145205128 145205251 -21445045 + B1F1 SINE Alu 6 132 -17 3 1692 333 0 0 0 chrX 145205260 145205297 -21444999 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 3 1692 665 238 7 7 chrX 145205657 145205801 -21444495 + B1_Mur3 SINE Alu 6 149 0 3 1692 268 352 4 65 chrX 145205884 145205995 -21444301 + PB1D10 SINE Alu 6 118 -2 3 1692 303 336 8 15 chrX 145206021 145206154 -21444142 + L1MC2 LINE L1 6100 6231 -113 3 1692 542 71 141 0 chrX 145206275 145206360 -21443936 - RMER19A LTR ERVK 0 737 641 3 1692 251 130 19 0 chrX 145206393 145206447 -21443849 + (TTAA)n Simple_repeat Simple_repeat 2 56 0 3 1692 37532 32 1 8 chrX 145206459 145211646 -21438650 + L1Md_A LINE L1 441 5586 -297 3 1692 8842 38 1 0 chrX 145211646 145212640 -21437656 + L1Md_A LINE L1 5587 6581 -1 3 1692 3795 154 35 9 chrX 145212663 145212704 -21437592 - RMER19A LTR ERVK -65 672 627 3 1692 3062 43 3 0 chrX 145212704 145213049 -21437247 + ORR1A0 LTR MaLR 1 346 0 3 1692 3795 154 35 9 chrX 145213049 145213662 -21436634 - RMER19A LTR ERVK -111 626 2 3 1692 226 281 16 0 chrX 145213662 145213726 -21436570 + L1MD LINE L1 5518 5582 -777 3 1692 388 289 41 0 chrX 145213726 145213823 -21436473 + B4A SINE B4 1 101 -191 3 1692 465 293 63 35 chrX 145213938 145214254 -21436042 + L1MB8 LINE L1 5805 6133 -41 3 1692 3547 41 2 0 chrX 145214256 145214649 -21435647 - MTA_Mm LTR MaLR 0 396 3 3 1692 325 307 57 28 chrX 145214653 145214794 -21435502 + B1F2 SINE Alu 5 149 0 3 1692 558 274 208 22 chrX 145215157 145215426 -21434870 + Lx8 LINE L1 7121 7439 -34 3 1692 1896 197 25 11 chrX 145215683 145216043 -21434253 - ORR1B2 LTR MaLR -2 365 1 3 1692 262 0 53 0 chrX 145216188 145216226 -21434070 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 3 1692 4003 186 62 88 chrX 145216231 145217157 -21433139 + RMER19B LTR ERVK 1 902 0 3 1692 442 280 15 36 chrX 145218561 145218698 -21431598 - ID_B1 SINE B4 -4 220 87 3 1692 934 307 0 0 chrX 145219280 145219508 -21430788 + MTEa LTR MaLR 24 251 -128 3 1692 661 145 7 101 chrX 145219570 145219708 -21430588 - URR1B DNA MER1_type -100 125 1 3 1692 700 159 91 6 chrX 145220183 145220348 -21429948 + Lx9 LINE L1 7464 7642 -2 3 1692 884 250 50 10 chrX 145220589 145220791 -21429505 + B3 SINE B2 1 210 -6 3 1692 376 306 73 15 chrX 145220830 145220966 -21429330 + ID_B1 SINE B4 73 216 -8 3 1692 549 88 0 0 chrX 145220980 145221060 -21429236 + (GA)n Simple_repeat Simple_repeat 1 80 0 3 1692 339 44 0 0 chrX 145221171 145221216 -21429080 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1692 301 306 0 0 chrX 145221810 145221882 -21428414 + ID4_ SINE ID 2 73 -10 3 1692 842 199 7 0 chrX 145221942 145222083 -21428213 + B1_Mur4 SINE Alu 2 143 -7 3 1692 223 344 56 0 chrX 145222146 145222236 -21428060 - B1F SINE Alu -50 99 5 3 1692 254 261 191 0 chrX 145222387 145222502 -21427794 + Charlie2a DNA MER1_type 185 321 -2540 3 1692 326 305 57 29 chrX 145222542 145222788 -21427508 + Charlie2a DNA MER1_type 1893 2145 -716 3 1692 5066 93 9 1 chrX 145224967 145225637 -21424659 + L1_Mus3 LINE L1 5959 6633 -5 3 211 33258 77 2 3 chrX 145225645 145230880 -21419416 + L1Md_F2 LINE L1 266 5589 -297 3 1693 8417 55 3 2 chrX 145230880 145231874 -21418422 + L1Md_F2 LINE L1 5590 6584 -1 3 1693 222 214 0 0 chrX 145232076 145232118 -21418178 + B3A SINE B2 4 45 -153 3 1693 2261 171 33 27 chrX 145232147 145232774 -21417522 + RMER17D LTR ERVK 1 633 -176 3 1693 2905 65 17 3 chrX 145233150 145233504 -21416792 - L1_Mus1 LINE L1 0 6567 6209 3 1693 2184 121 9 9 chrX 145233504 145233847 -21416449 + RMER17D LTR ERVK 547 889 0 3 1693 318 118 120 33 chrX 145233847 145233937 -21416359 - Lx LINE L1 -12 6642 6530 3 1693 477 148 0 0 chrX 145234310 145234391 -21415905 + (CCCA)n Simple_repeat Simple_repeat 3 83 0 3 1693 236 394 25 43 chrX 145234391 145234553 -21415743 - L2b LINE L2 0 3375 3217 3 1693 568 280 147 14 chrX 145237333 145237665 -21412631 - L1MC1 LINE L1 -13 6320 5931 3 1693 21 89 0 0 chrX 145238392 145238448 -21411848 + AT_rich Low_complexity Low_complexity 1 56 0 3 1693 188 35 35 0 chrX 145238481 145238510 -21411786 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 3 1693 4712 12 2 0 chrX 145239195 145239687 -21410609 - MT2_Mm LTR ERVL 0 493 1 3 1693 322 0 0 0 chrX 145239687 145239725 -21410571 - MERVL-int LTR ERVL 0 5485 5448 3 1693 368 179 46 35 chrX 145239725 145239812 -21410484 - ORR1A3-int LTR MaLR -1323 640 553 3 1693 41307 16 14 0 chrX 145239812 145245099 -21405197 - MERVL-int LTR ERVL -125 5360 1 3 1693 4712 12 2 0 chrX 145245099 145245591 -21404705 - MT2_Mm LTR ERVL 0 493 1 3 1693 5935 101 19 9 chrX 145245778 145247415 -21402881 - L1VL2 LINE L1 -1789 1826 172 4 1693 260 308 16 79 chrX 145247412 145247539 -21402757 - L1MC1 LINE L1 -390 5954 5836 3 1693 296 333 0 0 chrX 145247583 145247664 -21402632 - ID4_ SINE ID 0 83 3 4 1693 219 133 0 82 chrX 145247848 145247897 -21402399 + A-rich Low_complexity Low_complexity 2 46 0 4 1693 405 240 23 62 chrX 145247976 145248105 -21402191 - L1MCa LINE L1 -5875 633 510 4 1693 324 255 20 41 chrX 145248288 145248386 -21401910 - PB1 SINE Alu -3 124 29 4 1693 612 291 87 19 chrX 145248470 145248736 -21401560 - L1MCa LINE L1 -6220 288 5 4 1693 445 239 105 23 chrX 145248963 145249096 -21401200 - B1F2 SINE Alu 0 149 6 4 1693 186 71 0 0 chrX 145249187 145249215 -21401081 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 4 1693 501 190 71 5 chrX 145249215 145249338 -21400958 + ORR1C1 LTR MaLR 244 376 -2 4 1693 1919 127 0 48 chrX 145249579 145249893 -21400403 + Lx3B LINE L1 6672 6970 -3 4 1693 324 279 0 0 chrX 145250181 145250249 -21400047 + B1F SINE Alu 21 88 -61 4 1693 666 199 21 35 chrX 145250378 145250519 -21399777 + B1_Mur3 SINE Alu 5 143 -6 4 1693 412 298 20 66 chrX 145250564 145250715 -21399581 + RSINE1 SINE B4 5 148 -17 4 1693 339 25 0 0 chrX 145250726 145250766 -21399530 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 4 1693 1640 260 68 12 chrX 145250789 145251217 -21399079 - Lx6 LINE L1 -179 7281 6830 4 1693 787 286 39 0 chrX 145251534 145251737 -21398559 - ID_B1 SINE B4 -12 212 2 4 1693 2619 134 17 12 chrX 145251788 145252197 -21398099 + Lx2A LINE L1 6589 6999 -9 4 1693 432 0 0 0 chrX 145252197 145252245 -21398051 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 4 1693 459 292 75 14 chrX 145252275 145252438 -21397858 + B3A SINE B2 48 209 -7 4 1693 2018 174 34 13 chrX 145252443 145252821 -21397475 - ORR1B1 LTR MaLR -8 386 1 4 1693 417 250 39 71 chrX 145252826 145252981 -21397315 + B3 SINE B2 60 209 -7 4 1693 441 252 210 8 chrX 145253552 145253676 -21396620 - B3 SINE B2 -65 151 3 4 1693 1176 72 6 7 chrX 145253683 145253855 -21396441 - L1_Mm LINE L1 -521 5365 5197 4 1693 202 91 67 22 chrX 145254260 145254305 -21395991 + A-rich Low_complexity Low_complexity 3 49 0 4 1693 260 184 102 0 chrX 145254434 145254483 -21395813 - ID_B1 SINE B4 -17 207 154 4 1693 275 303 36 28 chrX 145254656 145254757 -21395539 + B1F1 SINE Alu 19 118 -2 4 1693 441 252 210 8 chrX 145254761 145254885 -21395411 + B3 SINE B2 3 151 -65 4 1693 6326 20 0 0 chrX 145255026 145255739 -21394557 - L1_Mm LINE L1 -195 5688 4976 4 1693 1129 56 7 0 chrX 145255740 145255884 -21394412 + L1Md_A LINE L1 6436 6580 -2 4 1693 480 167 0 0 chrX 145256073 145256169 -21394127 + (CCTA)n Simple_repeat Simple_repeat 3 98 0 4 1693 864 260 19 14 chrX 145256179 145256386 -21393910 - ID_B1 SINE B4 -15 209 2 4 1693 375 327 56 74 chrX 145256760 145256975 -21393321 - ORR1E LTR MaLR -148 211 1 4 1693 517 329 0 7 chrX 145257113 145257254 -21393042 + B1F1 SINE Alu 8 147 -2 4 1693 389 286 18 37 chrX 145257392 145257501 -21392795 + B3A SINE B2 1 107 -91 4 1693 21 36 0 0 chrX 145257524 145257552 -21392744 + AT_rich Low_complexity Low_complexity 1 28 0 4 1693 668 350 18 4 chrX 145257588 145257815 -21392481 + B4A SINE B4 2 231 -61 4 1693 597 282 25 19 chrX 145257816 145257975 -21392321 + RSINE1 SINE B4 6 165 0 4 1693 259 190 0 79 chrX 145258015 145258078 -21392218 + B4A SINE B4 235 292 0 4 1693 326 238 12 70 chrX 145258271 145258357 -21391939 - ID4 SINE ID 0 83 3 4 1693 277 295 95 35 chrX 145258372 145258488 -21391808 + MER58B DNA MER1_type 172 294 -47 4 1693 386 328 24 8 chrX 145258895 145259018 -21391278 - B4A SINE B4 -166 126 2 4 1693 299 283 0 16 chrX 145259565 145259653 -21390643 + ID4 SINE ID 9 94 -58 4 1693 789 173 15 8 chrX 145259837 145259971 -21390325 + B1_Mus2 SINE Alu 1 135 -12 4 1693 597 64 18 35 chrX 145259973 145260086 -21390210 + (CAGAGA)n Simple_repeat Simple_repeat 2 112 0 4 1693 217 246 0 21 chrX 145260139 145260191 -21390105 + B3 SINE B2 1 51 -147 4 1693 197 371 20 10 chrX 145260697 145260795 -21389501 - MIRb SINE MIR -50 218 120 4 1693 3136 153 54 43 chrX 145261511 145262541 -21387755 + RLTR13D1 LTR ERVK 1 1023 0 4 1693 506 333 28 5 chrX 145263073 145263290 -21387006 - MLT1E2 LTR MaLR -30 597 376 4 1693 413 18 54 0 chrX 145263526 145263582 -21386714 + (TTTTG)n Simple_repeat Simple_repeat 1 59 0 4 1693 814 178 0 0 chrX 145263582 145263711 -21386585 - B1_Mus1 SINE Alu -13 135 7 4 1693 585 0 0 0 chrX 145263730 145263795 -21386501 + (GGAA)n Simple_repeat Simple_repeat 2 66 0 4 1693 232 268 18 0 chrX 145263831 145263887 -21386409 + ID4_ SINE ID 24 80 -3 4 1693 235 269 0 0 chrX 145263887 145263939 -21386357 + GA-rich Low_complexity Low_complexity 1 52 0 4 1693 748 312 19 0 chrX 145264241 145264449 -21385847 + ID_B1 SINE B4 3 214 -10 4 1693 237 262 93 23 chrX 145264575 145264661 -21385635 - B1F2 SINE Alu -49 100 9 4 1693 212 102 19 58 chrX 145265257 145265309 -21384987 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 4 1693 369 287 70 0 chrX 145265309 145265424 -21384872 - ID_B1 SINE B4 0 224 102 4 1693 196 120 0 39 chrX 145266394 145266446 -21383850 + (TCTCTG)n Simple_repeat Simple_repeat 5 54 0 4 1693 192 182 0 0 chrX 145266456 145266500 -21383796 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 4 1693 274 277 245 0 chrX 145266557 145266651 -21383645 - B3A SINE B2 -80 118 2 4 1693 270 347 27 14 chrX 145267320 145267393 -21382903 + RSINE1 SINE B4 92 165 0 4 1693 598 107 86 35 chrX 145267418 145267534 -21382762 - BC1_Mm scRNA scRNA -18 134 13 4 1693 244 49 0 0 chrX 145267534 145267575 -21382721 + L1_Mus2 LINE L1 6526 6566 0 4 1693 22 35 0 0 chrX 145267575 145267604 -21382692 + AT_rich Low_complexity Low_complexity 1 29 0 4 1693 563 314 180 10 chrX 145267827 145268127 -21382169 + MTE2b LTR MaLR 1 351 -28 4 1693 1015 153 0 0 chrX 145268160 145268304 -21381992 - B1_Mus2 SINE Alu -3 144 1 4 1693 278 293 0 0 chrX 145268620 145268678 -21381618 - PB1D10 SINE Alu -37 80 23 4 1693 339 25 0 0 chrX 145268686 145268726 -21381570 + (CCCTG)n Simple_repeat Simple_repeat 2 41 0 4 1693 453 122 0 0 chrX 145268894 145268968 -21381328 + (TC)n Simple_repeat Simple_repeat 2 75 0 4 1693 4035 77 8 2 chrX 145268985 145269493 -21380803 - L1_Mus1 LINE L1 -2 6565 6055 4 1693 517 286 0 8 chrX 145269493 145269613 -21380683 - ID_B1 SINE B4 -18 206 88 4 1693 234 258 169 67 chrX 145270499 145270694 -21379602 - L1MC LINE L1 -2059 5823 5609 4 1693 267 359 92 0 chrX 145271058 145271189 -21379107 + MER5A DNA MER1_type 2 144 -45 4 1693 362 274 9 79 chrX 145271333 145271465 -21378831 - B3A SINE B2 -5 193 70 4 1693 277 297 153 23 chrX 145271500 145271631 -21378665 - B1F2 SINE Alu 0 149 2 4 1693 654 153 10 10 chrX 145271669 145271800 -21378496 - L1_Mur2 LINE L1 -2202 3944 3778 4 1693 212 254 71 43 chrX 145272035 145272105 -21378191 + ID4_ SINE ID 9 80 -3 4 1693 238 347 133 0 chrX 145272181 145272279 -21378017 + B1F1 SINE Alu 1 111 -38 4 1693 278 264 44 35 chrX 145272342 145272456 -21377840 + PB1D10 SINE Alu 2 116 -1 4 1693 216 0 0 0 chrX 145272645 145272669 -21377627 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1693 404 67 0 16 chrX 145272846 145272907 -21377389 + (TTG)n Simple_repeat Simple_repeat 3 62 0 4 1693 335 55 68 14 chrX 145273475 145273549 -21376747 + (CAAAA)n Simple_repeat Simple_repeat 2 79 0 4 1693 323 231 53 53 chrX 145273615 145273729 -21376567 - B4A SINE B4 -173 119 6 4 1693 6197 77 30 21 chrX 145274756 145275563 -21374733 - L1Md_F2 LINE L1 -10 6572 5759 4 1693 2931 124 87 46 chrX 145276325 145276822 -21373474 + MURVY-LTR LTR ERV1 1 517 -2 4 1693 358 286 56 76 chrX 145276866 145277116 -21373180 + MuRRS4-int LTR ERV1 24 268 -7510 4 1693 4397 300 34 29 chrX 145277163 145278965 -21371331 + MuRRS4-int LTR ERV1 343 2292 -5264 4 1693 2768 301 7 14 chrX 145279012 145279891 -21370405 + MuRRS4-int LTR ERV1 2367 3239 -1451 4 1693 274 339 23 46 chrX 145280458 145280631 -21369665 - B4 SINE B4 -14 278 110 4 1693 303 403 0 14 chrX 145280704 145280850 -21369446 - RSINE1 SINE B4 -19 146 3 4 1693 251 111 0 0 chrX 145281717 145281753 -21368543 + B4 SINE B4 38 73 -219 4 1693 3372 118 20 2 chrX 145282060 145282554 -21367742 - RLTR1C LTR ERV1 0 503 1 4 1693 378 253 178 0 chrX 145282587 145282733 -21367563 + B3 SINE B2 24 195 -21 4 1693 443 107 12 0 chrX 145283942 145284026 -21366270 + (TG)n Simple_repeat Simple_repeat 1 85 0 4 1693 292 300 0 4 chrX 145284270 145284392 -21365904 + B1_Mur2 SINE Alu 2 120 0 4 1693 315 312 30 48 chrX 145285210 145285378 -21364918 - B4 SINE B4 -18 274 110 4 1693 403 331 14 27 chrX 145285450 145285596 -21364700 - RSINE1 SINE B4 -19 146 3 4 1693 200 246 18 0 chrX 145285935 145285992 -21364304 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 4 1693 214 194 0 0 chrX 145286430 145286466 -21363830 + B4 SINE B4 38 73 -219 4 1693 3613 101 0 14 chrX 145286770 145287280 -21363016 - RLTR1C LTR ERV1 0 503 1 4 1693 398 275 123 32 chrX 145287313 145287467 -21362829 + B3 SINE B2 24 191 -25 4 1693 181 75 50 0 chrX 145288703 145288743 -21361553 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1693 294 29 0 0 chrX 145288745 145288780 -21361516 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 1693 399 83 0 0 chrX 145288780 145288839 -21361457 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1693 339 271 0 63 chrX 145289065 145289191 -21361105 + PB1D9 SINE Alu 2 119 -1 5 1693 249 306 24 47 chrX 145290033 145290160 -21360136 - B4 SINE B4 -46 246 123 5 1693 288 410 0 14 chrX 145290246 145290392 -21359904 - RSINE1 SINE B4 -19 146 3 5 1693 1528 132 1 12 chrX 145291564 145291847 -21358449 - RLTR1C LTR ERV1 -16 589 258 5 1693 512 150 8 0 chrX 145293015 145293142 -21357154 + (TG)n Simple_repeat Simple_repeat 1 128 0 5 1693 322 277 0 56 chrX 145293366 145293492 -21356804 + PB1D9 SINE Alu 2 120 0 5 1693 251 358 22 38 chrX 145294273 145294456 -21355840 - B4 SINE B4 -3 289 110 5 1693 358 382 0 14 chrX 145294529 145294675 -21355621 - RSINE1 SINE B4 -19 146 3 5 1693 183 42 0 0 chrX 145295063 145295087 -21355209 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 1693 251 111 0 0 chrX 145295531 145295567 -21354729 + B4 SINE B4 38 73 -219 5 1693 463 259 109 29 chrX 145295902 145296077 -21354219 + B3 SINE B2 24 212 -4 5 1693 574 127 16 0 chrX 145297283 145297409 -21352887 + (TG)n Simple_repeat Simple_repeat 2 129 0 5 1693 311 274 8 64 chrX 145297637 145297762 -21352534 + PB1D9 SINE Alu 2 119 -1 5 1693 347 382 0 14 chrX 145298808 145298954 -21351342 - RSINE1 SINE B4 -19 146 3 5 1693 243 156 22 0 chrX 145299811 145299856 -21350440 + B4 SINE B4 29 74 -218 5 1693 464 281 108 28 chrX 145300187 145300363 -21349933 + B3 SINE B2 24 213 -3 5 1693 298 278 9 9 chrX 145301583 145301625 -21348671 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1693 744 33 0 0 chrX 145301625 145301716 -21348580 + (TC)n Simple_repeat Simple_repeat 2 92 0 5 1693 298 278 9 9 chrX 145301716 145301789 -21348507 + (TG)n Simple_repeat Simple_repeat 1 73 0 5 1693 329 271 0 63 chrX 145301961 145302087 -21348209 + PB1D9 SINE Alu 2 119 -1 5 1693 8987 61 3 1 chrX 145302228 145304066 -21346230 - L1Md_F2 LINE L1 0 6582 4740 5 1693 270 314 36 54 chrX 145304716 145304884 -21345412 - B4 SINE B4 -18 274 110 5 1693 326 352 14 27 chrX 145304956 145305102 -21345194 - RSINE1 SINE B4 -19 146 3 5 1693 3629 98 2 14 chrX 145306270 145306779 -21343517 - RLTR1C LTR ERV1 0 503 1 5 1693 438 276 109 29 chrX 145306811 145306986 -21343310 + B3 SINE B2 24 212 -4 5 1693 207 0 0 0 chrX 145308190 145308213 -21342083 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 1693 714 34 0 0 chrX 145308213 145308301 -21341995 + (GA)n Simple_repeat Simple_repeat 1 89 0 5 1693 398 178 8 0 chrX 145308301 145308430 -21341866 + (TG)n Simple_repeat Simple_repeat 1 130 0 5 1693 362 271 8 25 chrX 145308608 145308729 -21341567 + PB1D9 SINE Alu 2 120 0 5 1693 254 421 0 14 chrX 145309775 145309922 -21340374 - RSINE1 SINE B4 -18 147 3 5 1693 224 182 23 0 chrX 145310748 145310792 -21339504 + B4 SINE B4 29 73 -219 5 1693 3361 109 16 18 chrX 145311098 145311602 -21338694 - RLTR1C LTR ERV1 0 503 1 5 1693 463 271 109 29 chrX 145311634 145311809 -21338487 + B3 SINE B2 24 212 -4 5 1693 570 15 0 0 chrX 145313015 145313082 -21337214 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 1693 474 18 0 0 chrX 145313082 145313136 -21337160 + (GA)n Simple_repeat Simple_repeat 1 55 0 5 1693 239 209 9 0 chrX 145313142 145313257 -21337039 + (TG)n Simple_repeat Simple_repeat 1 116 0 5 1693 362 271 8 25 chrX 145313435 145313556 -21336740 + PB1D9 SINE Alu 2 120 0 5 1693 228 336 48 62 chrX 145314607 145314753 -21335543 - RSINE1 SINE B4 -19 146 3 5 1693 219 259 0 0 chrX 145315089 145315147 -21335149 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 5 1693 224 182 23 0 chrX 145315577 145315621 -21334675 + B4 SINE B4 29 73 -219 5 1693 3340 113 16 12 chrX 145315927 145316428 -21333868 - RLTR1C LTR ERV1 0 503 1 5 1693 271 262 198 0 chrX 145316589 145316715 -21333581 + B3 SINE B2 24 174 -42 5 1693 384 146 0 0 chrX 145317954 145318043 -21332253 + (TG)n Simple_repeat Simple_repeat 2 90 0 5 1693 324 288 8 25 chrX 145318304 145318425 -21331871 + PB1D9 SINE Alu 2 120 0 5 1693 245 358 32 32 chrX 145319454 145319610 -21330686 - RSINE1 SINE B4 -7 158 3 5 1693 405 0 0 0 chrX 145319715 145319760 -21330536 + (A)n Simple_repeat Simple_repeat 1 45 0 5 1693 229 159 23 0 chrX 145320503 145320547 -21329749 + B4 SINE B4 29 73 -219 5 1693 3515 112 2 4 chrX 145320846 145321349 -21328947 - RLTR1C LTR ERV1 0 503 2 5 1693 485 249 114 34 chrX 145321383 145321558 -21328738 + B3 SINE B2 24 212 -4 5 1693 626 162 6 0 chrX 145322752 145322912 -21327384 + (TG)n Simple_repeat Simple_repeat 1 161 0 5 1693 334 280 8 25 chrX 145323092 145323213 -21327083 + PB1D9 SINE Alu 2 120 0 5 1693 244 314 24 47 chrX 145324052 145324179 -21326117 - B4 SINE B4 -46 246 123 5 1693 299 403 0 14 chrX 145324265 145324411 -21325885 - RSINE1 SINE B4 -19 146 3 5 1693 203 276 0 0 chrX 145324748 145324806 -21325490 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 5 1693 224 182 23 0 chrX 145325237 145325281 -21325015 + B4 SINE B4 29 73 -219 5 1693 786 137 0 15 chrX 145325585 145325718 -21324578 - RLTR1C LTR ERV1 0 503 373 5 1693 389 144 11 0 chrX 145326474 145326564 -21323732 + (TG)n Simple_repeat Simple_repeat 1 91 0 5 1693 334 280 8 25 chrX 145326788 145326909 -21323387 + PB1D9 SINE Alu 2 120 0 5 1693 29 47 0 0 chrX 145327046 145327089 -21323207 + AT_rich Low_complexity Low_complexity 1 43 0 5 1693 297 365 11 27 chrX 145327705 145327888 -21322408 - B4 SINE B4 -3 289 110 5 1693 409 307 28 35 chrX 145327961 145328106 -21322190 - RSINE1 SINE B4 -19 146 3 5 1693 557 122 9 0 chrX 145329286 145329401 -21320895 + (TG)n Simple_repeat Simple_repeat 1 116 0 5 1693 282 305 0 48 chrX 145329627 145329751 -21320545 + PB1D9 SINE Alu 2 119 -1 5 1693 249 200 0 0 chrX 145330176 145330236 -21320060 + T-rich Low_complexity Low_complexity 1 60 0 5 1693 225 0 0 0 chrX 145330622 145330647 -21319649 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1693 213 350 48 0 chrX 145331436 145331539 -21318757 + PB1D7 SINE Alu 3 110 -10 5 1693 1301 154 29 29 chrX 145331699 145331974 -21318322 + Lx2A1 LINE L1 6733 7007 -1 5 1693 362 233 3 21 chrX 145332025 145332111 -21318185 + ID SINE ID 9 88 -204 5 1693 2376 199 43 33 chrX 145332132 145332642 -21317654 + Lx LINE L1 6134 6648 -6 5 1693 2404 182 12 31 chrX 145332625 145332812 -21317484 + L1_Mm LINE L1 5275 5461 -422 5 1693 1187 131 64 18 chrX 145332812 145333030 -21317266 + L1_Mus3 LINE L1 6407 6634 -4 5 1693 2212 182 12 31 chrX 145333030 145333325 -21316971 + L1_Mm LINE L1 5462 5748 -135 5 1693 1773 152 26 3 chrX 145333318 145333662 -21316634 - L1_Mur2 LINE L1 -576 5301 4950 5 1693 226 279 0 29 chrX 145334023 145334093 -21316203 + (TATG)n Simple_repeat Simple_repeat 3 70 0 5 1693 541 318 7 137 chrX 145334143 145334201 -21316095 - B4 SINE B4 -26 266 217 5 1693 228 35 0 0 chrX 145334201 145334230 -21316066 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 1693 541 318 7 137 chrX 145334230 145334387 -21315909 - B4 SINE B4 -76 216 77 5 1693 316 331 98 33 chrX 145334387 145334540 -21315756 - RSINE1 SINE B4 0 165 3 5 1693 541 318 7 137 chrX 145334540 145334615 -21315681 - B4 SINE B4 -216 76 13 5 1693 3966 267 47 57 chrX 145335058 145336988 -21313308 - Lx9 LINE L1 -18 7626 5712 5 1693 285 253 0 0 chrX 145336966 145337045 -21313251 - L1_Rod LINE L1 -1525 4322 4244 5 1693 488 277 146 4 chrX 145337294 145337533 -21312763 + Lx8 LINE L1 7196 7468 -5 5 1693 282 286 91 45 chrX 145337562 145337650 -21312646 + B3A SINE B2 25 116 -82 5 1693 525 16 0 0 chrX 145337701 145337763 -21312533 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 1693 406 326 9 36 chrX 145338977 145339117 -21311179 - B1F SINE Alu -1 148 13 5 1693 595 306 61 1 chrX 145339447 145339620 -21310676 + B3A SINE B2 2 188 -28 5 1693 351 44 0 0 chrX 145339620 145339665 -21310631 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1693 591 312 82 10 chrX 145339665 145339685 -21310611 + B3 SINE B2 189 208 -8 5 1693 328 323 142 69 chrX 145339890 145340123 -21310173 + B4A SINE B4 14 263 -29 5 1693 345 24 0 0 chrX 145340156 145340198 -21310098 + (TC)n Simple_repeat Simple_repeat 2 43 0 5 1693 312 48 0 0 chrX 145340200 145340242 -21310054 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1693 203 161 17 35 chrX 145340402 145340460 -21309836 + (GTTTG)n Simple_repeat Simple_repeat 3 59 0 5 1693 248 276 0 0 chrX 145340468 145340526 -21309770 - ID4_ SINE ID -17 66 9 5 1693 408 335 125 0 chrX 145340597 145340749 -21309547 - ID_B1 SINE B4 -52 172 2 5 1693 216 289 0 0 chrX 145341296 145341348 -21308948 - ID4_ SINE ID -26 57 6 5 1693 656 312 57 5 chrX 145341905 145342098 -21308198 + ID_B1 SINE B4 6 208 -16 5 1693 202 225 0 0 chrX 145342412 145342452 -21307844 + GA-rich Low_complexity Low_complexity 3 42 0 5 1693 404 147 0 0 chrX 145343601 145343669 -21306627 - U3 snRNA snRNA -149 68 1 5 1693 288 260 0 0 chrX 145343972 145344049 -21306247 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 1693 619 319 34 24 chrX 145344130 145344422 -21305874 - Lx9 LINE L1 -1067 6577 6283 5 1693 5874 137 27 16 chrX 145344422 145345590 -21304706 - Lx LINE L1 -1 6653 5476 5 1693 852 140 97 0 chrX 145345588 145345805 -21304491 - L1_Mur2 LINE L1 -444 3470 3219 5 1693 503 101 13 0 chrX 145345805 145345884 -21304412 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 5 1693 6570 97 12 3 chrX 145346374 145347354 -21302942 - L1Md_F2 LINE L1 -1 6581 5593 5 1693 8762 95 6 1 chrX 145347353 145348685 -21301611 - L1_Mm LINE L1 -2898 2985 1648 6 1693 639 112 31 0 chrX 145348687 145348785 -21301511 - IAPLTR1_Mm LTR ERVK -266 101 1 6 1693 3188 177 124 13 chrX 145348785 145349580 -21300716 - L1VL2 LINE L1 -5379 956 73 6 1693 297 289 12 12 chrX 145349961 145350050 -21300246 + B3A SINE B2 1 89 -127 6 1693 241 353 48 62 chrX 145350050 145350106 -21300190 + ID_B1 SINE B4 1 143 -81 6 1693 204 237 143 13 chrX 145350579 145350656 -21299640 + MIR3 SINE MIR 85 171 -37 6 1693 184 356 14 0 chrX 145351366 145351439 -21298857 - MIRb SINE MIR -75 193 120 6 1693 462 341 29 0 chrX 145352694 145352899 -21297397 - MLT1E2 LTR MaLR -30 597 387 6 1693 818 204 0 14 chrX 145353162 145353306 -21296990 - B1_Mus1 SINE Alu 0 148 7 6 1693 423 98 0 0 chrX 145353323 145353384 -21296912 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 6 1693 258 245 0 0 chrX 145353472 145353525 -21296771 + GA-rich Low_complexity Low_complexity 4 56 0 6 1693 651 330 29 0 chrX 145353812 145354018 -21296278 + ID_B1 SINE B4 3 214 -10 6 1693 264 317 48 38 chrX 145354124 145354229 -21296067 - PB1D10 SINE Alu -35 114 9 6 1693 233 326 67 0 chrX 145354283 145354372 -21295924 - B1F SINE Alu -37 112 18 6 1693 253 324 27 0 chrX 145354413 145354487 -21295809 - ID4 SINE ID -4 79 4 6 1693 281 93 0 18 chrX 145354866 145354921 -21295375 + (TTGG)n Simple_repeat Simple_repeat 3 56 0 6 1693 260 70 23 0 chrX 145354915 145354958 -21295338 + (TTG)n Simple_repeat Simple_repeat 3 46 0 6 1693 380 246 67 50 chrX 145354958 145355044 -21295252 - ID_B1 SINE B4 0 224 136 6 1693 3208 58 2 0 chrX 145355044 145355439 -21294857 + MTA_Mm LTR MaLR 1 396 0 6 1693 380 246 67 50 chrX 145355439 145355472 -21294824 - ID_B1 SINE B4 -89 135 103 6 1693 251 238 25 0 chrX 145355520 145355600 -21294696 - L1MB7 LINE L1 -56 6128 6047 6 1693 185 273 0 22 chrX 145356360 145356405 -21293891 - L3 LINE CR1 -2290 2199 2156 6 1693 196 120 0 39 chrX 145356442 145356494 -21293802 + (TCTCTG)n Simple_repeat Simple_repeat 5 54 0 6 1693 212 208 0 20 chrX 145356502 145356551 -21293745 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 6 1693 269 348 107 0 chrX 145356567 145356679 -21293617 - B3A SINE B2 -22 176 53 6 1693 246 62 0 0 chrX 145357090 145357122 -21293174 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1693 392 241 42 63 chrX 145357817 145357959 -21292337 - ID_B1 SINE B4 0 224 86 6 1693 297 0 0 0 chrX 145358694 145358727 -21291569 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 211 321 89 0 0 chrX 145358845 145358890 -21291406 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1694 596 87 130 0 chrX 145358931 145359023 -21291273 - BC1_Mm scRNA scRNA -36 116 13 6 1694 225 49 0 0 chrX 145359023 145359064 -21291232 + L1_Mus2 LINE L1 6526 6566 0 6 1694 22 35 0 0 chrX 145359064 145359093 -21291203 + AT_rich Low_complexity Low_complexity 1 29 0 6 1694 576 304 185 10 chrX 145359316 145359607 -21290689 + MTE2a LTR MaLR 1 342 -37 6 1694 305 0 50 0 chrX 145359607 145359647 -21290649 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 6 1694 916 141 0 0 chrX 145359648 145359783 -21290513 - B1_Mus2 SINE Alu -12 135 1 6 1694 312 248 34 68 chrX 145359680 145359797 -21290499 - RLTR25B LTR ERVK -526 502 390 6 1694 239 272 46 39 chrX 145359797 145359829 -21290467 - ORR1B1-int LTR MaLR -755 750 601 6 1694 555 43 0 0 chrX 145360105 145360175 -21290121 + (CCCTG)n Simple_repeat Simple_repeat 2 71 0 6 1694 1076 36 7 0 chrX 145360344 145360481 -21289815 + (TTTC)n Simple_repeat Simple_repeat 4 141 0 6 1694 3704 79 10 4 chrX 145360491 145360999 -21289297 - L1_Mus1 LINE L1 -2 6565 6055 6 1694 570 243 0 14 chrX 145360999 145361163 -21289133 - ID_B1 SINE B4 -18 206 2 6 1694 34 24 0 0 chrX 145361503 145361544 -21288752 + AT_rich Low_complexity Low_complexity 1 41 0 6 1694 267 317 0 12 chrX 145361668 145361751 -21288545 + MER20 DNA MER1_type 121 202 -17 6 1694 902 126 49 120 chrX 145362133 145362354 -21287942 - B2_Mm2 SINE B2 -7 188 1 6 1694 274 288 39 85 chrX 145362404 145362533 -21287763 - RSINE1 SINE B4 -31 134 12 6 1694 491 277 41 28 chrX 145362528 145362673 -21287623 - ID_B1 SINE B4 -77 147 1 6 1694 296 340 66 66 chrX 145363927 145364078 -21286218 + MER5A DNA MER1_type 8 158 -31 6 1694 349 280 21 81 chrX 145364172 145364331 -21285965 - B3A SINE B2 -2 214 70 6 1694 295 292 125 44 chrX 145364361 145364497 -21285799 - B1F2 SINE Alu -1 148 2 6 1694 503 137 53 0 chrX 145364565 145364660 -21285636 - L1_Mur2 LINE L1 -2000 3877 3778 6 1694 210 299 24 94 chrX 145364668 145364753 -21285543 - ID4 SINE ID -2 81 3 6 1694 180 340 0 0 chrX 145364774 145364827 -21285469 + MIRm SINE MIR 219 271 -5 6 1694 279 288 14 0 chrX 145364897 145364970 -21285326 + ID4_ SINE ID 7 80 -3 6 1694 436 282 81 0 chrX 145365045 145365169 -21285127 + ID_B1 SINE B4 81 214 -10 6 1694 323 259 26 18 chrX 145365208 145365322 -21284974 + PB1D10 SINE Alu 2 116 -1 6 1694 618 39 0 0 chrX 145365334 145365411 -21284885 + (CA)n Simple_repeat Simple_repeat 2 78 0 6 1694 253 217 33 16 chrX 145365815 145365876 -21284420 + BC1_Mm scRNA scRNA 22 83 -69 6 1694 219 36 0 0 chrX 145366408 145366436 -21283860 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 6 1694 283 238 60 36 chrX 145366536 145366619 -21283677 - B4A SINE B4 -202 90 6 6 1694 233 67 0 0 chrX 145367004 145367034 -21283262 - L1_Mus1 LINE L1 -680 5887 5858 6 1694 867 113 7 0 chrX 145367032 145367183 -21283113 + L1_Mm LINE L1 5254 5405 -478 6 1694 2202 145 26 81 chrX 145367197 145367332 -21282964 - L1_Mur1 LINE L1 -2340 3546 3423 6 1694 1544 123 60 28 chrX 145367332 145367616 -21282680 - Lx LINE L1 -4 6650 6358 6 1694 2202 145 26 81 chrX 145367616 145368013 -21282283 - L1_Mur1 LINE L1 -2464 3422 3043 6 1694 183 47 21 85 chrX 145368024 145368071 -21282225 + T-rich Low_complexity Low_complexity 5 48 0 6 1694 4508 71 2 13 chrX 145368083 145368680 -21281616 - L1Md_F2 LINE L1 -4 6578 5989 6 1694 234 243 83 28 chrX 145368847 145368919 -21281377 - B1F SINE Alu -29 120 45 6 1694 242 207 16 65 chrX 145369216 145369278 -21281018 + B4 SINE B4 15 73 -219 6 1694 1914 79 8 4 chrX 145369580 145369847 -21280449 - RLTR1C LTR ERV1 0 503 236 6 1694 705 10 105 48 chrX 145369846 145369951 -21280345 - RLTR1C LTR ERV1 -392 111 1 6 1694 13747 91 45 22 chrX 145369951 145372099 -21278197 - MMVL30-int LTR ERV1 0 3698 1501 6 1694 261 0 0 0 chrX 145372244 145372273 -21278023 + (TC)n Simple_repeat Simple_repeat 2 30 0 6 1694 333 0 0 0 chrX 145372273 145372309 -21277987 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 1694 479 161 55 125 chrX 145372413 145372692 -21277604 - MMVL30-int LTR ERV1 -2190 1508 960 6 1694 4607 124 4 4 chrX 145372757 145373495 -21276801 - MMVL30-int LTR ERV1 -2245 1453 716 6 1694 219 173 38 19 chrX 145373826 145373879 -21276417 + (CAAA)n Simple_repeat Simple_repeat 4 57 0 6 1694 2443 184 13 35 chrX 145373922 145374467 -21275829 - MMVL30-int LTR ERV1 -7023 533 1 6 1694 3807 82 4 2 chrX 145374467 145374969 -21275327 - RLTR1C LTR ERV1 0 503 1 6 1694 275 256 23 11 chrX 145375060 145375147 -21275149 + B3 SINE B2 125 212 -4 6 1694 23 0 0 0 chrX 145375381 145375404 -21274892 + AT_rich Low_complexity Low_complexity 1 23 0 6 1694 326 70 56 0 chrX 145375648 145375719 -21274577 + (TTTTG)n Simple_repeat Simple_repeat 3 77 0 6 1694 261 327 68 19 chrX 145376918 145377021 -21273275 + PB1D7 SINE Alu 3 110 -10 6 1694 1338 176 30 0 chrX 145377182 145377449 -21272847 + Lx2A1 LINE L1 6733 7007 -1 6 1694 351 270 2 15 chrX 145377515 145377603 -21272693 + ID_B1 SINE B4 9 91 -201 6 1694 1594 236 47 47 chrX 145377622 145378071 -21272225 + Lx LINE L1 6134 6582 -72 6 1694 645 69 0 0 chrX 145378369 145378456 -21271840 + (TC)n Simple_repeat Simple_repeat 1 87 0 6 1694 360 0 0 0 chrX 145378456 145378495 -21271801 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1694 196 30 0 57 chrX 145378657 145378692 -21271604 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 6 1694 293 288 0 0 chrX 145378727 145378793 -21271503 - ID2 SINE ID -17 66 1 6 1694 485 304 120 5 chrX 145378825 145379017 -21271279 - ID_B1 SINE B4 -9 215 2 6 1694 596 345 12 6 chrX 145380152 145380324 -21269972 + ID_B1 SINE B4 6 178 -46 6 1694 229 200 0 0 chrX 145380661 145380701 -21269595 + GA-rich Low_complexity Low_complexity 3 42 0 6 1694 1297 88 22 11 chrX 145382357 145382541 -21267755 - B2_Mm2 SINE B2 -9 186 1 6 1694 367 149 15 0 chrX 145382589 145382656 -21267640 - U3 snRNA snRNA -149 68 1 6 1694 192 241 0 0 chrX 145382957 145383036 -21267260 + (TG)n Simple_repeat Simple_repeat 2 80 0 6 1694 479 344 24 8 chrX 145383132 145383378 -21266918 - Lx9 LINE L1 -1067 6577 6328 6 1694 7641 127 4 49 chrX 145383398 145383859 -21266437 + L1_Mus1 LINE L1 4547 5005 -878 6 1694 1599 32 5 0 chrX 145383859 145384048 -21266248 - B2_Mm1t SINE B2 -2 191 2 6 1694 312 19 19 0 chrX 145384051 145384103 -21266193 - B2_Mm1t SINE B2 0 193 141 6 1694 7641 111 6 20 chrX 145384103 145385659 -21264637 + L1_Mus1 LINE L1 5009 6560 -7 6 1694 30407 45 1 2 chrX 145385787 145390989 -21259307 + L1Md_Gf LINE L1 243 5531 -355 6 1694 9915 29 0 0 chrX 145390990 145392113 -21258183 - MERVL-int LTR ERVL -672 4813 3691 6 1694 479 91 99 0 chrX 145392113 145392187 -21258109 + L1Md_T LINE L1 5496 5586 -297 6 1694 8952 35 0 1 chrX 145392187 145393182 -21257114 + L1Md_T LINE L1 5587 6580 -2 6 1694 361 149 15 0 chrX 145394499 145394566 -21255730 - U3 snRNA snRNA -149 68 1 6 1694 263 273 0 0 chrX 145394869 145394946 -21255350 + (TG)n Simple_repeat Simple_repeat 2 78 0 6 1694 652 333 34 24 chrX 145395027 145395319 -21254977 - Lx9 LINE L1 -1067 6577 6283 6 1694 16366 132 27 28 chrX 145395319 145396652 -21253644 - Lx LINE L1 -1 6653 5342 6 1694 672 13 0 0 chrX 145396652 145396729 -21253567 + (TTTC)n Simple_repeat Simple_repeat 4 80 0 6 1694 16366 148 20 81 chrX 145396729 145399631 -21250665 - Lx LINE L1 -542 5341 2612 6 1694 10324 87 5 36 chrX 145399627 145400407 -21249889 - L1_Mus1 LINE L1 -118 6449 5676 7 1694 3186 85 10 0 chrX 145400407 145400808 -21249488 + L1_Mus1 LINE L1 6162 6566 -1 7 1694 10324 127 1 20 chrX 145400808 145402183 -21248113 - L1_Mus1 LINE L1 -208 5675 4326 7 1694 3167 167 34 54 chrX 145402161 145402846 -21247450 - L1_Mur1 LINE L1 -2813 3073 2403 7 1694 1230 171 22 0 chrX 145402844 145403157 -21247139 - L1_Mur1 LINE L1 -4496 1390 1068 7 1694 1585 207 87 143 chrX 145403157 145403675 -21246621 + RMER19B LTR ERVK 1 489 -413 7 1694 313 282 83 118 chrX 145404184 145404413 -21245883 - MLT2B5 LTR ERVL -261 340 120 7 1694 544 277 65 60 chrX 145404282 145404482 -21245814 - MTEa LTR MaLR -157 222 22 7 1694 183 329 23 58 chrX 145404890 145404977 -21245319 + MIRm SINE MIR 85 168 -108 7 1694 242 344 21 11 chrX 145405136 145405230 -21245066 + MLT1H1 LTR MaLR 159 253 -326 7 1694 289 393 49 0 chrX 145405285 145405407 -21244889 + MLT1H1 LTR MaLR 315 442 -113 7 1694 4481 153 31 2 chrX 145405593 145406513 -21243783 - Lx5 LINE L1 -1062 5988 5024 7 1694 261 119 0 0 chrX 145406514 145406556 -21243740 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1694 3919 219 58 6 chrX 145406560 145407418 -21242878 + Lx5 LINE L1 6148 7050 0 7 1694 340 304 118 0 chrX 145407590 145407692 -21242604 + PB1 SINE Alu 14 127 0 7 1694 1864 130 49 3 chrX 145407861 145408118 -21242178 - L1_Mus3 LINE L1 -2 6636 6367 7 1694 270 0 0 0 chrX 145408118 145408148 -21242148 + (TTG)n Simple_repeat Simple_repeat 1 30 0 7 1694 1864 130 49 3 chrX 145408148 145408176 -21242120 - L1_Mus3 LINE L1 -272 6366 6339 7 1694 1406 172 0 0 chrX 145408179 145408412 -21241884 + L1_Mm LINE L1 5411 5643 -240 7 1694 398 233 158 0 chrX 145408414 145408534 -21241762 + B3 SINE B2 53 191 -25 7 1694 2601 130 136 36 chrX 145409616 145410088 -21240208 + MURVY-LTR LTR ERV1 1 519 0 7 1694 10755 296 52 48 chrX 145410088 145415501 -21234795 + RLTR6-int LTR ERV1 3 5646 -2132 7 1694 2871 131 90 33 chrX 145415791 145416280 -21234016 + MURVY-LTR LTR ERV1 1 517 -2 7 1694 542 170 7 0 chrX 145416450 145416597 -21233699 + (TG)n Simple_repeat Simple_repeat 1 148 0 7 1694 323 304 8 25 chrX 145416777 145416895 -21233401 + PB1D9 SINE Alu 5 120 0 7 1694 308 364 18 36 chrX 145417381 145417549 -21232747 - B4 SINE B4 -18 274 110 7 1694 406 338 14 27 chrX 145417667 145417813 -21232483 - RSINE1 SINE B4 -19 146 3 7 1694 5841 83 4 7 chrX 145418398 145419148 -21231148 + L1Md_F2 LINE L1 5835 6582 0 7 1694 328 25 0 0 chrX 145419721 145419761 -21230535 - RLTR1C LTR ERV1 0 503 464 7 1694 323 340 10 0 chrX 145419754 145419854 -21230442 + B1F SINE Alu 29 129 -20 7 1694 273 232 36 0 chrX 145419862 145419918 -21230378 + Lx6 LINE L1 6524 6581 -879 7 1694 557 276 136 50 chrX 145419919 145420140 -21230156 + Lx5 LINE L1 6480 6719 -331 7 1694 5553 104 14 13 chrX 145420398 145421157 -21229139 - L1_Mus1 LINE L1 -1 6566 5807 7 1694 234 307 0 13 chrX 145421157 145421225 -21229071 - L1MC5 LINE L1 -61 7900 7834 7 1694 2901 111 33 8 chrX 145421419 145421957 -21228339 - L1_Mus3 LINE L1 -684 5954 5407 7 1694 2084 122 7 3 chrX 145421957 145422254 -21228042 + L1_Mus3 LINE L1 6338 6635 -3 7 1694 291 327 18 27 chrX 145422411 145422521 -21227775 - PB1D10 SINE Alu -2 115 7 7 1694 3199 216 71 6 chrX 145422686 145423376 -21226920 - Lx5 LINE L1 0 7050 6316 7 1694 310 333 78 21 chrX 145423404 145423545 -21226751 - MLT1L LTR MaLR -151 459 311 7 1694 388 267 107 8 chrX 145423884 145424005 -21226291 - ID_B1 SINE B4 -91 133 1 7 1694 784 307 12 4 chrX 145424049 145424304 -21225992 - Lx7 LINE L1 -396 7300 7044 7 1694 288 310 32 90 chrX 145425008 145425196 -21225100 + MER5A DNA MER1_type 4 180 -9 7 1694 1212 82 0 0 chrX 145425258 145425404 -21224892 + B1_Mm SINE Alu 2 147 0 7 1694 548 260 32 0 chrX 145425538 145425661 -21224635 + B1F1 SINE Alu 6 132 -17 7 1694 297 0 0 0 chrX 145425670 145425703 -21224593 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 7 1694 665 238 7 7 chrX 145426063 145426207 -21224089 + B1_Mur3 SINE Alu 6 149 0 7 1694 268 352 4 65 chrX 145426290 145426401 -21223895 + PB1D10 SINE Alu 6 118 -2 7 1694 303 336 8 15 chrX 145426427 145426560 -21223736 + L1MC2 LINE L1 6100 6231 -113 7 1694 542 71 141 0 chrX 145426681 145426766 -21223530 - RMER19A LTR ERVK 0 737 641 7 1694 251 130 19 0 chrX 145426799 145426853 -21223443 + (TTAA)n Simple_repeat Simple_repeat 2 56 0 7 1694 37579 32 1 7 chrX 145426865 145432048 -21218248 + L1Md_A LINE L1 441 5586 -297 7 1694 8875 39 0 0 chrX 145432048 145433044 -21217252 + L1Md_A LINE L1 5587 6582 0 7 1694 3787 157 35 8 chrX 145433070 145433110 -21217186 - RMER19A LTR ERVK -66 671 627 7 1694 3120 35 3 0 chrX 145433110 145433455 -21216841 + ORR1A0 LTR MaLR 1 346 0 7 1694 3787 157 35 8 chrX 145433455 145434067 -21216229 - RMER19A LTR ERVK -111 626 2 7 1694 226 281 16 0 chrX 145434067 145434131 -21216165 + L1MD LINE L1 5518 5582 -777 7 1694 388 289 41 0 chrX 145434131 145434228 -21216068 + B4A SINE B4 1 101 -191 7 1694 465 293 63 35 chrX 145434343 145434659 -21215637 + L1MB8 LINE L1 5805 6133 -41 7 1694 3547 41 2 0 chrX 145434661 145435054 -21215242 - MTA_Mm LTR MaLR 0 396 3 7 1694 328 307 57 28 chrX 145435058 145435199 -21215097 + B1F2 SINE Alu 5 149 0 7 1694 558 274 208 22 chrX 145435562 145435831 -21214465 + Lx8 LINE L1 7121 7439 -34 7 1694 1896 197 25 11 chrX 145436089 145436449 -21213847 - ORR1B2 LTR MaLR -2 365 1 7 1694 4043 186 55 82 chrX 145436615 145437542 -21212754 + RMER19B LTR ERVK 1 902 0 7 1694 442 280 15 36 chrX 145438946 145439083 -21211213 - ID_B1 SINE B4 -4 220 87 7 1694 925 307 0 0 chrX 145439665 145439893 -21210403 + MTEa LTR MaLR 24 251 -128 7 1694 661 145 7 101 chrX 145439955 145440093 -21210203 - URR1B DNA MER1_type -100 125 1 7 1694 234 360 22 0 chrX 145440095 145440184 -21210112 + MTEa LTR MaLR 283 373 -6 7 1694 686 165 91 6 chrX 145440568 145440733 -21209563 + Lx9 LINE L1 7464 7642 -2 7 1694 821 260 50 10 chrX 145440974 145441176 -21209120 + B3 SINE B2 1 210 -6 7 1694 356 313 73 15 chrX 145441215 145441351 -21208945 + ID_B1 SINE B4 73 216 -8 7 1694 615 98 0 0 chrX 145441365 145441457 -21208839 + (GA)n Simple_repeat Simple_repeat 1 92 0 7 1694 378 57 0 0 chrX 145441568 145441621 -21208675 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 1694 310 288 0 59 chrX 145442215 145442300 -21207996 + ID4_ SINE ID 2 81 -2 7 1694 842 199 7 0 chrX 145442347 145442488 -21207808 + B1_Mur4 SINE Alu 2 143 -7 7 1694 216 0 0 0 chrX 145442492 145442516 -21207780 + (TA)n Simple_repeat Simple_repeat 2 25 0 7 1694 479 268 143 7 chrX 145442565 145442719 -21207577 - ID_B1 SINE B4 -47 177 3 7 1694 427 292 149 31 chrX 145442961 145443505 -21206791 + Charlie2a DNA MER1_type 1893 2500 -361 7 1694 9201 28 0 0 chrX 145444386 145445461 -21204835 - L1_Mm LINE L1 -1630 4253 3179 7 1694 4427 91 10 2 chrX 145445461 145446043 -21204253 + L1_Mus3 LINE L1 6047 6633 -5 7 1694 32870 81 1 3 chrX 145446051 145451289 -21199007 + L1Md_F2 LINE L1 266 5589 -297 7 1694 8464 52 3 2 chrX 145451289 145452282 -21198014 + L1Md_F2 LINE L1 5590 6583 -2 7 1694 222 214 0 0 chrX 145452485 145452527 -21197769 + B3A SINE B2 4 45 -153 7 1694 2399 136 41 22 chrX 145452554 145453247 -21197049 + RMER17D LTR ERVK 1 552 -337 7 1694 2934 75 0 3 chrX 145453624 145453984 -21196312 - L1_Mus1 LINE L1 0 6567 6209 7 1694 2171 127 9 9 chrX 145453984 145454327 -21195969 + RMER17D LTR ERVK 547 889 0 7 1694 495 105 12 0 chrX 145454327 145454413 -21195883 - Lx LINE L1 -12 6642 6556 7 1694 447 137 0 0 chrX 145454796 145454869 -21195427 + (CCCA)n Simple_repeat Simple_repeat 3 75 0 7 1694 216 396 31 43 chrX 145454869 145455030 -21195266 - L2b LINE L2 0 3375 3217 7 1694 423 306 20 0 chrX 145457854 145458001 -21192295 - L1MC1 LINE L1 -163 6170 6021 7 1694 21 89 0 0 chrX 145458715 145458771 -21191525 + AT_rich Low_complexity Low_complexity 1 56 0 7 1694 188 35 35 0 chrX 145458800 145458829 -21191467 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 7 1694 279 284 0 0 chrX 145459478 145459552 -21190744 + PB1D10 SINE Alu 42 115 -2 7 1694 5694 106 32 4 chrX 145459696 145461299 -21188997 - L1VL2 LINE L1 -1789 1826 177 7 1694 228 306 28 0 chrX 145461304 145461376 -21188920 - L1MC1 LINE L1 -1831 5954 5881 7 1694 347 305 31 8 chrX 145461470 145461599 -21188697 - BC1_Mm scRNA scRNA -18 134 3 7 1694 224 111 0 82 chrX 145461789 145461838 -21188458 + A-rich Low_complexity Low_complexity 2 46 0 7 1694 366 244 23 0 chrX 145461960 145462046 -21188250 - L1MCa LINE L1 -5911 597 510 7 1694 343 253 10 40 chrX 145462229 145462328 -21187968 - PB1 SINE Alu -3 124 29 7 1694 631 291 87 19 chrX 145462412 145462678 -21187618 - L1MCa LINE L1 -6220 288 5 7 1694 475 235 89 22 chrX 145462904 145463039 -21187257 - B1F2 SINE Alu 0 149 6 7 1694 335 263 40 0 chrX 145463180 145463279 -21187017 + MER53 DNA hAT 91 193 0 7 1694 185 356 11 32 chrX 145463346 145463439 -21186857 + MER5A DNA MER1_type 1 91 -98 7 1694 513 92 0 0 chrX 145463468 145463544 -21186752 + (TCCC)n Simple_repeat Simple_repeat 3 78 0 7 1694 284 102 0 20 chrX 145463595 145463645 -21186651 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 7 1694 366 329 20 41 chrX 145463735 145463881 -21186415 + LTR16A1 LTR ERVL 47 189 -267 7 1694 186 103 0 0 chrX 145463896 145463925 -21186371 + (TCTCCC)n Simple_repeat Simple_repeat 1 29 0 7 1694 1171 232 84 71 chrX 145464145 145464192 -21186104 + ORR1D1 LTR MaLR 1 38 -336 7 1694 1207 58 0 0 chrX 145464192 145464330 -21185966 + B1_Mus1 SINE Alu 3 140 -8 7 1694 190 29 88 0 chrX 145464331 145464365 -21185931 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 7 1694 1171 232 84 71 chrX 145464365 145464558 -21185738 + ORR1D1 LTR MaLR 39 231 -143 7 1694 186 71 0 0 chrX 145464558 145464586 -21185710 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 7 1694 1171 232 84 71 chrX 145464586 145464709 -21185587 + ORR1D1 LTR MaLR 232 371 -3 7 1694 1907 137 0 45 chrX 145464949 145465262 -21185034 + Lx3B LINE L1 6672 6970 -3 7 1694 21 0 0 0 chrX 145465269 145465290 -21185006 + AT_rich Low_complexity Low_complexity 1 21 0 7 1694 324 279 0 0 chrX 145465551 145465619 -21184677 + B1F SINE Alu 21 88 -61 7 1694 681 188 44 15 chrX 145465748 145465883 -21184413 + B1_Mur3 SINE Alu 5 143 -6 7 1694 422 298 20 66 chrX 145465928 145466079 -21184217 + RSINE1 SINE B4 5 148 -17 8 1694 549 0 0 0 chrX 145466090 145466151 -21184145 + (TAAA)n Simple_repeat Simple_repeat 4 64 0 8 1694 1652 257 65 12 chrX 145466177 145466606 -21183690 - Lx6 LINE L1 -179 7281 6830 8 1694 825 281 39 0 chrX 145466922 145467125 -21183171 - ID_B1 SINE B4 -12 212 2 8 1694 2588 144 17 7 chrX 145467175 145467582 -21182714 + Lx2A LINE L1 6589 6999 -9 8 1694 471 78 0 0 chrX 145467582 145467646 -21182650 + (TAAA)n Simple_repeat Simple_repeat 2 65 0 8 1694 442 225 0 33 chrX 145467676 145467768 -21182528 + B3 SINE B2 48 136 -80 8 1694 300 70 0 0 chrX 145467773 145467816 -21182480 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 1694 1989 177 35 13 chrX 145467857 145468230 -21182066 - ORR1B1 LTR MaLR -8 386 6 8 1694 417 250 39 71 chrX 145468240 145468395 -21181901 + B3 SINE B2 60 209 -7 8 1694 202 91 67 22 chrX 145469380 145469425 -21180871 + A-rich Low_complexity Low_complexity 3 49 0 8 1694 260 184 102 0 chrX 145469554 145469603 -21180693 - ID_B1 SINE B4 -17 207 154 8 1694 275 303 36 28 chrX 145469776 145469877 -21180419 + B1F1 SINE Alu 19 118 -2 8 1694 441 252 210 8 chrX 145469881 145470005 -21180291 + B3 SINE B2 3 151 -65 8 1694 6289 21 0 0 chrX 145470146 145470859 -21179437 - L1_Mm LINE L1 -195 5688 4976 8 1694 975 24 179 0 chrX 145470860 145470983 -21179313 + L1Md_A LINE L1 6436 6580 -2 8 1694 579 159 0 0 chrX 145471171 145471284 -21179012 + (CCTA)n Simple_repeat Simple_repeat 3 115 0 8 1694 862 252 19 15 chrX 145471296 145471501 -21178795 - ID_B1 SINE B4 -17 207 2 8 1694 183 42 0 0 chrX 145471593 145471617 -21178679 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 8 1694 328 334 62 92 chrX 145471710 145472093 -21178203 - ORR1E LTR MaLR 0 370 1 8 1694 499 326 0 7 chrX 145472224 145472372 -21177924 + B1F1 SINE Alu 1 147 -2 8 1694 344 314 18 37 chrX 145472510 145472619 -21177677 + B3A SINE B2 1 107 -91 8 1694 28 0 0 0 chrX 145472644 145472672 -21177624 + AT_rich Low_complexity Low_complexity 1 28 0 8 1694 668 350 18 4 chrX 145472708 145472935 -21177361 + B4A SINE B4 2 231 -61 8 1694 589 282 25 19 chrX 145472936 145473095 -21177201 + RSINE1 SINE B4 6 165 0 8 1694 254 207 0 79 chrX 145473135 145473198 -21177098 + B4A SINE B4 235 292 0 8 1694 307 238 12 70 chrX 145473391 145473477 -21176819 - ID4 SINE ID 0 83 3 8 1694 277 295 95 35 chrX 145473492 145473608 -21176688 + MER58B DNA MER1_type 172 294 -47 8 1694 366 344 24 8 chrX 145474019 145474142 -21176154 - B4A SINE B4 -166 126 2 8 1694 284 301 0 16 chrX 145474689 145474786 -21175510 + ID4 SINE ID 9 103 -49 8 1694 799 165 15 8 chrX 145474966 145475100 -21175196 + B1_Mus2 SINE Alu 1 135 -12 8 1694 1041 103 0 0 chrX 145475100 145475275 -21175021 + (GA)n Simple_repeat Simple_repeat 2 176 0 8 1694 217 244 0 22 chrX 145475328 145475374 -21174922 + B3 SINE B2 1 45 -171 8 1694 200 326 21 42 chrX 145475886 145475982 -21174314 - MIRb SINE MIR -50 218 125 8 1694 3141 153 64 49 chrX 145476697 145477740 -21172556 + RLTR13D1 LTR ERVK 1 1023 0 8 1694 478 343 28 5 chrX 145478270 145478487 -21171809 - MLT1E2 LTR MaLR -30 597 376 8 1694 792 168 14 28 chrX 145478708 145478723 -21171573 - B1_Mur4 SINE Alu -1 149 138 8 1694 368 20 59 0 chrX 145478723 145478774 -21171522 + (TTTTG)n Simple_repeat Simple_repeat 1 54 0 8 1694 814 178 0 0 chrX 145478774 145478903 -21171393 - B1_Mus1 SINE Alu -13 135 7 8 1694 621 0 0 0 chrX 145478922 145478991 -21171305 + (GGAA)n Simple_repeat Simple_repeat 2 70 0 8 1694 242 268 18 0 chrX 145479027 145479083 -21171213 + ID4_ SINE ID 24 80 -3 8 1694 260 250 0 0 chrX 145479083 145479135 -21171161 + polypurine Low_complexity Low_complexity 1 52 0 8 1694 810 303 19 0 chrX 145479435 145479643 -21170653 + ID_B1 SINE B4 3 214 -10 8 1694 237 262 93 23 chrX 145479768 145479854 -21170442 - B1F2 SINE Alu -49 100 9 8 1694 226 82 19 58 chrX 145480450 145480502 -21169794 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 8 1694 344 296 70 0 chrX 145480502 145480617 -21169679 - ID_B1 SINE B4 0 224 102 8 1694 236 284 105 26 chrX 145480976 145481052 -21169244 + ID4 SINE ID 2 83 0 8 1694 216 352 95 8 chrX 145481052 145481102 -21169194 + ID_B1 SINE B4 2 138 -86 8 1694 266 194 0 31 chrX 145481575 145481639 -21168657 + (TCTCTG)n Simple_repeat Simple_repeat 5 66 0 8 1694 204 182 0 0 chrX 145481649 145481693 -21168603 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 8 1694 263 287 245 0 chrX 145481750 145481844 -21168452 - B3A SINE B2 -80 118 2 8 1694 192 40 0 0 chrX 145482129 145482154 -21168142 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 8 1694 315 105 0 0 chrX 145482422 145482479 -21167817 + (T)n Simple_repeat Simple_repeat 1 57 0 8 1694 272 365 0 13 chrX 145482558 145482633 -21167663 + RSINE1 SINE B4 92 165 0 8 1694 606 83 0 0 chrX 145482693 145482777 -21167519 - BC1_Mm scRNA scRNA -56 96 13 8 1694 264 40 0 39 chrX 145482777 145482829 -21167467 + L1_Mus2 LINE L1 6526 6580 -2 8 1694 587 301 195 17 chrX 145483070 145483362 -21166934 + MTE2a LTR MaLR 1 344 -35 8 1694 190 27 51 51 chrX 145483362 145483401 -21166895 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 8 1694 1044 139 0 0 chrX 145483402 145483546 -21166750 - B1_Mus2 SINE Alu -3 144 1 8 1694 254 281 18 0 chrX 145483862 145483919 -21166377 - PB1D10 SINE Alu -37 80 23 8 1694 363 44 0 0 chrX 145483927 145483972 -21166324 + (CCCTG)n Simple_repeat Simple_repeat 2 46 0 8 1694 567 122 0 0 chrX 145484141 145484231 -21166065 + (TC)n Simple_repeat Simple_repeat 2 91 0 8 1694 4173 71 2 2 chrX 145484247 145484755 -21165541 - L1_Mus1 LINE L1 -2 6565 6058 8 1694 539 261 280 17 chrX 145484755 145484922 -21165374 - ID_B1 SINE B4 -10 214 2 8 1694 26 0 0 0 chrX 145485284 145485310 -21164986 + AT_rich Low_complexity Low_complexity 1 26 0 8 1694 379 247 0 12 chrX 145485428 145485510 -21164786 + MER20 DNA MER1_type 121 201 -18 8 1694 1073 47 18 85 chrX 145485896 145486060 -21164236 - B2_Mm2 SINE B2 -7 188 36 8 1694 240 315 27 0 chrX 145486057 145486130 -21164166 - B4A SINE B4 -217 75 1 8 1694 272 288 39 85 chrX 145486180 145486309 -21163987 - RSINE1 SINE B4 -31 134 12 8 1694 470 289 35 21 chrX 145486304 145486449 -21163847 - ID_B1 SINE B4 -77 147 1 8 1694 256 268 93 53 chrX 145487227 145487377 -21162919 - L1MC LINE L1 -2118 5764 5609 8 1694 264 370 79 0 chrX 145487745 145487872 -21162424 + MER5A DNA MER1_type 8 144 -45 8 1694 358 272 9 81 chrX 145488016 145488148 -21162148 - B3A SINE B2 -5 193 70 8 1694 272 303 109 36 chrX 145488178 145488315 -21161981 - B1F2 SINE Alu -1 148 2 8 1694 660 154 11 10 chrX 145488354 145488485 -21161811 - L1_Mur2 LINE L1 -2202 3944 3778 8 1694 236 239 71 43 chrX 145488720 145488790 -21161506 + ID4_ SINE ID 9 80 -3 8 1694 229 337 133 0 chrX 145488866 145488964 -21161332 + B1F1 SINE Alu 1 111 -38 8 1694 265 273 44 35 chrX 145489027 145489141 -21161155 + PB1D10 SINE Alu 2 116 -1 8 1694 242 95 0 23 chrX 145489518 145489561 -21160735 + (TTG)n Simple_repeat Simple_repeat 3 44 0 8 1695 309 76 45 0 chrX 145490128 145490194 -21160102 + (CAAAAA)n Simple_repeat Simple_repeat 4 72 0 8 1695 314 241 53 53 chrX 145490264 145490378 -21159918 - B4A SINE B4 -173 119 6 8 1695 6194 76 30 21 chrX 145491407 145492211 -21158085 - L1Md_F2 LINE L1 -13 6569 5759 8 1695 2977 120 87 46 chrX 145492973 145493470 -21156826 + MURVY-LTR LTR ERV1 1 517 -2 8 1695 369 302 35 61 chrX 145493472 145493764 -21156532 + MuRRS4-int LTR ERV1 3 268 -7510 8 1695 4396 287 25 36 chrX 145493811 145495570 -21154726 + MuRRS4-int LTR ERV1 343 2336 -5442 8 1695 2750 304 6 11 chrX 145495660 145496538 -21153758 + MuRRS4-int LTR ERV1 2367 3239 -1451 8 1695 213 260 0 20 chrX 145496568 145496619 -21153677 - ID SINE ID -153 71 22 8 1695 354 351 23 41 chrX 145497104 145497276 -21153020 - B4 SINE B4 -14 278 110 8 1695 315 366 14 27 chrX 145497349 145497495 -21152801 - RSINE1 SINE B4 -19 146 3 8 1695 257 294 76 29 chrX 145498118 145498223 -21152073 - ID_B1 SINE B4 -7 217 108 8 1695 265 111 0 0 chrX 145498364 145498400 -21151896 + B4 SINE B4 38 73 -219 8 1695 3532 122 20 2 chrX 145498707 145499201 -21151095 - RLTR1C LTR ERV1 0 503 1 8 1695 442 264 159 0 chrX 145499234 145499397 -21150899 + B3 SINE B2 24 212 -4 8 1695 875 68 8 0 chrX 145500590 145500722 -21149574 + (TG)n Simple_repeat Simple_repeat 1 133 0 1 1695 350 275 0 30 chrX 145500954 145501076 -21149220 + B1_Mm SINE Alu 2 120 0 2 1695 347 291 42 60 chrX 145501893 145502061 -21148235 - B4 SINE B4 -18 274 110 3 1695 403 345 14 27 chrX 145502133 145502279 -21148017 - RSINE1 SINE B4 -19 146 3 4 1695 200 246 18 0 chrX 145502616 145502673 -21147623 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 5 1695 227 194 0 0 chrX 145503112 145503148 -21147148 + B4 SINE B4 38 73 -219 6 1695 3837 99 0 14 chrX 145503451 145503961 -21146335 - RLTR1C LTR ERV1 0 503 1 7 1695 451 294 109 29 chrX 145503995 145504170 -21146126 + B3 SINE B2 24 212 -4 8 1695 225 141 28 14 chrX 145505383 145505419 -21144877 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 1695 228 35 0 0 chrX 145505419 145505448 -21144848 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 1695 225 141 28 14 chrX 145505448 145505483 -21144813 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1695 399 263 0 63 chrX 145505709 145505835 -21144461 + PB1D9 SINE Alu 2 119 -1 1 1695 347 360 29 43 chrX 145506631 145506840 -21143456 - B4 SINE B4 0 292 87 1 1695 272 380 14 27 chrX 145506890 145507036 -21143260 - RSINE1 SINE B4 -19 146 3 1 1695 234 325 12 0 chrX 145507048 145507131 -21143165 - B4 SINE B4 -207 85 2 1 1695 219 259 0 0 chrX 145507372 145507430 -21142866 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 1 1695 218 241 16 65 chrX 145507842 145507904 -21142392 + B4 SINE B4 15 73 -219 1 1695 1648 128 1 12 chrX 145508208 145508491 -21141805 - RLTR1C LTR ERV1 -16 589 258 1 1695 192 40 0 0 chrX 145509659 145509684 -21140612 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1695 327 32 62 31 chrX 145509687 145509751 -21140545 + (TCTG)n Simple_repeat Simple_repeat 1 66 0 1 1695 209 250 0 38 chrX 145509766 145509845 -21140451 + (TG)n Simple_repeat Simple_repeat 1 76 0 2 1695 369 274 0 57 chrX 145510006 145510130 -21140166 + PB1D9 SINE Alu 2 118 -2 2 1695 315 343 27 44 chrX 145510914 145511097 -21139199 - B4 SINE B4 -3 289 110 2 1695 371 345 14 27 chrX 145511170 145511316 -21138980 - RSINE1 SINE B4 -19 146 3 2 1695 258 260 13 0 chrX 145511652 145511729 -21138567 + (TTTG)n Simple_repeat Simple_repeat 3 80 0 2 1695 231 394 52 15 chrX 145511923 145512057 -21138239 - ID_B1 SINE B4 -2 222 84 2 1695 256 190 16 65 chrX 145512145 145512207 -21138089 + B4 SINE B4 15 73 -219 2 1695 533 253 109 29 chrX 145512542 145512717 -21137579 + B3 SINE B2 24 212 -4 2 1695 952 86 12 0 chrX 145513918 145514080 -21136216 + (TG)n Simple_repeat Simple_repeat 2 165 0 2 1695 355 274 8 64 chrX 145514308 145514433 -21135863 + PB1D9 SINE Alu 2 119 -1 2 1695 270 352 29 47 chrX 145515224 145515394 -21134902 - B4 SINE B4 -3 289 123 3 1695 344 359 14 27 chrX 145515480 145515626 -21134670 - RSINE1 SINE B4 -19 146 3 3 1695 217 241 16 65 chrX 145516464 145516526 -21133770 + B4 SINE B4 15 73 -219 3 1695 3931 92 2 14 chrX 145516829 145517338 -21132958 - RLTR1C LTR ERV1 0 503 1 3 1695 524 265 109 29 chrX 145517370 145517545 -21132751 + B3 SINE B2 24 212 -4 3 1695 459 0 0 0 chrX 145518751 145518802 -21131494 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1695 609 14 0 0 chrX 145518802 145518871 -21131425 + (GA)n Simple_repeat Simple_repeat 1 70 0 3 1695 293 191 9 0 chrX 145518878 145518993 -21131303 + (TG)n Simple_repeat Simple_repeat 1 116 0 3 1695 382 280 8 25 chrX 145519171 145519292 -21131004 + PB1D9 SINE Alu 2 120 0 3 1695 280 336 48 62 chrX 145520337 145520483 -21129813 - RSINE1 SINE B4 -19 146 3 3 1695 212 288 15 0 chrX 145520495 145520561 -21129735 - B4 SINE B4 -207 85 19 4 1695 200 246 18 0 chrX 145520820 145520877 -21129419 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 4 1695 227 194 0 0 chrX 145521317 145521353 -21128943 + B4 SINE B4 38 73 -219 4 1695 3580 109 16 8 chrX 145521657 145522156 -21128140 - RLTR1C LTR ERV1 0 503 1 4 1695 326 271 156 40 chrX 145522328 145522501 -21127795 + B3 SINE B2 24 216 0 4 1695 549 114 0 0 chrX 145523688 145523793 -21126503 + (TG)n Simple_repeat Simple_repeat 2 106 0 4 1695 200 288 0 0 chrX 145523811 145523891 -21126405 + (TG)n Simple_repeat Simple_repeat 1 80 0 4 1695 319 291 0 57 chrX 145524052 145524176 -21126120 + PB1D9 SINE Alu 2 118 -2 4 1695 279 357 51 34 chrX 145524963 145525140 -21125156 - B4 SINE B4 -3 289 110 4 1695 275 364 32 32 chrX 145525203 145525359 -21124937 - RSINE1 SINE B4 -7 158 3 4 1695 219 282 14 0 chrX 145525379 145525450 -21124846 - B4 SINE B4 -216 76 5 4 1695 246 159 23 0 chrX 145526214 145526258 -21124038 + B4 SINE B4 29 73 -219 4 1695 3702 110 4 4 chrX 145526562 145527064 -21123232 - RLTR1C LTR ERV1 0 503 2 5 1695 541 249 114 34 chrX 145527098 145527273 -21123023 + B3 SINE B2 24 212 -4 5 1695 695 165 6 0 chrX 145528466 145528642 -21121654 + (TG)n Simple_repeat Simple_repeat 1 177 0 5 1695 382 280 8 25 chrX 145528822 145528943 -21121353 + PB1D9 SINE Alu 2 120 0 5 1695 317 298 24 47 chrX 145529776 145529903 -21120393 - B4 SINE B4 -46 246 123 5 1695 277 373 14 27 chrX 145529988 145530134 -21120162 - RSINE1 SINE B4 -19 146 3 5 1695 233 325 12 0 chrX 145530146 145530229 -21120067 - B4 SINE B4 -207 85 2 5 1695 236 224 16 65 chrX 145530942 145531004 -21119292 + B4 SINE B4 15 73 -219 5 1695 3639 108 20 4 chrX 145531308 145531803 -21118493 - RLTR1C LTR ERV1 0 503 1 5 1695 322 262 128 47 chrX 145531990 145532138 -21118158 + B3 SINE B2 57 216 0 5 1695 496 147 15 0 chrX 145533330 145533466 -21116830 + (TG)n Simple_repeat Simple_repeat 1 138 0 5 1695 319 291 0 57 chrX 145533695 145533819 -21116477 + PB1D9 SINE Alu 2 118 -2 6 1695 279 357 51 34 chrX 145534602 145534779 -21115517 - B4 SINE B4 -3 289 110 6 1695 278 364 32 32 chrX 145534842 145534998 -21115298 - RSINE1 SINE B4 -7 158 3 6 1695 219 282 14 0 chrX 145535018 145535089 -21115207 - B4 SINE B4 -216 76 5 6 1695 233 304 76 29 chrX 145535616 145535721 -21114575 - ID_B1 SINE B4 -7 217 108 6 1695 246 159 23 0 chrX 145535853 145535897 -21114399 + B4 SINE B4 29 73 -219 6 1695 3829 104 4 6 chrX 145536201 145536704 -21113592 - RLTR1C LTR ERV1 0 503 2 6 1695 511 235 123 32 chrX 145536738 145536892 -21113404 + B3 SINE B2 24 191 -25 6 1695 451 181 6 6 chrX 145538106 145538262 -21112034 + (TG)n Simple_repeat Simple_repeat 1 156 0 6 1695 382 280 8 25 chrX 145538440 145538561 -21111735 + PB1D9 SINE Alu 2 120 0 6 1695 29 47 0 0 chrX 145538697 145538740 -21111556 + AT_rich Low_complexity Low_complexity 1 43 0 6 1695 340 341 22 38 chrX 145539359 145539542 -21110754 - B4 SINE B4 -3 289 110 7 1695 465 302 35 41 chrX 145539615 145539760 -21110536 - RSINE1 SINE B4 -19 146 3 7 1695 575 120 8 0 chrX 145540928 145541045 -21109251 + (TG)n Simple_repeat Simple_repeat 1 118 0 7 1695 287 336 0 27 chrX 145541271 145541381 -21108915 + PB1D9 SINE Alu 2 108 -12 7 1695 243 0 0 0 chrX 145541384 145541411 -21108885 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1695 251 206 0 0 chrX 145541828 145541891 -21108405 + T-rich Low_complexity Low_complexity 1 63 0 7 1695 236 340 48 0 chrX 145543083 145543186 -21107110 + PB1D7 SINE Alu 3 110 -10 7 1695 1318 154 53 19 chrX 145543347 145543612 -21106684 + Lx2A1 LINE L1 6733 7006 -2 7 1695 288 274 0 27 chrX 145543674 145543749 -21106547 + tRNA-Ala-GCY_ tRNA tRNA 3 75 0 7 1695 375 229 3 21 chrX 145543749 145543760 -21106536 + ID SINE ID 9 88 -204 7 1695 2178 215 45 41 chrX 145543781 145544294 -21106002 + Lx LINE L1 6134 6648 -6 8 1695 2438 177 12 31 chrX 145544277 145544464 -21105832 + L1_Mm LINE L1 5275 5461 -422 8 1695 1216 140 64 18 chrX 145544464 145544682 -21105614 + L1_Mus3 LINE L1 6407 6634 -4 8 1695 2438 177 12 31 chrX 145544682 145544977 -21105319 + L1_Mm LINE L1 5462 5748 -135 8 1695 1961 151 23 3 chrX 145544970 145545315 -21104981 - L1_Mur2 LINE L1 -576 5301 4950 8 1695 217 279 0 29 chrX 145545678 145545748 -21104548 + (TATG)n Simple_repeat Simple_repeat 3 70 0 8 1695 517 309 7 137 chrX 145545798 145545856 -21104440 - B4 SINE B4 -26 266 217 8 1695 228 35 0 0 chrX 145545856 145545885 -21104411 + (TTG)n Simple_repeat Simple_repeat 2 30 0 8 1695 517 309 7 137 chrX 145545885 145546042 -21104254 - B4 SINE B4 -76 216 77 8 1695 350 313 105 33 chrX 145546042 145546194 -21104102 - RSINE1 SINE B4 0 165 3 8 1695 517 309 7 137 chrX 145546194 145546269 -21104027 - B4 SINE B4 -216 76 13 8 1695 21 57 0 0 chrX 145546356 145546391 -21103905 + AT_rich Low_complexity Low_complexity 1 35 0 8 1695 4096 253 34 28 chrX 145546713 145547992 -21102304 - Lx9 LINE L1 -18 7626 6184 8 1695 1071 117 0 0 chrX 145547992 145548163 -21102133 + (TA)n Simple_repeat Simple_repeat 2 172 0 9 1695 909 331 84 67 chrX 145548163 145548641 -21101655 - Lx9 LINE L1 -1290 6183 5715 8 1695 330 250 0 85 chrX 145548619 145548737 -21101559 - L1_Rod LINE L1 -1525 4322 4215 9 1695 606 274 145 4 chrX 145548947 145549189 -21101107 + Lx8 LINE L1 7196 7471 -2 9 1695 277 286 91 45 chrX 145549215 145549303 -21100993 + B3A SINE B2 25 116 -82 9 1695 522 0 0 0 chrX 145549354 145549412 -21100884 + (TG)n Simple_repeat Simple_repeat 1 58 0 9 1695 362 328 8 39 chrX 145550625 145550752 -21099544 - B1F SINE Alu -1 148 26 9 1695 576 312 61 1 chrX 145551095 145551268 -21099028 + B3A SINE B2 2 188 -28 9 1695 387 41 0 0 chrX 145551268 145551317 -21098979 + (CA)n Simple_repeat Simple_repeat 2 50 0 9 1695 568 318 82 10 chrX 145551317 145551337 -21098959 + B3 SINE B2 189 208 -8 9 1695 347 292 201 54 chrX 145551551 145551775 -21098521 + B4A SINE B4 7 263 -29 9 1695 645 14 0 0 chrX 145551814 145551888 -21098408 + (TC)n Simple_repeat Simple_repeat 2 75 0 9 1695 276 53 0 0 chrX 145551890 145551928 -21098368 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1695 207 135 37 37 chrX 145552092 145552146 -21098150 + T-rich Low_complexity Low_complexity 3 56 0 1 1695 381 342 125 0 chrX 145552283 145552435 -21097861 - ID_B1 SINE B4 -52 172 2 1 1695 216 289 0 0 chrX 145552983 145553035 -21097261 - ID4_ SINE ID -26 57 6 1 1695 643 323 57 5 chrX 145553592 145553785 -21096511 + ID_B1 SINE B4 6 208 -16 1 1695 204 225 0 0 chrX 145554099 145554139 -21096157 + GA-rich Low_complexity Low_complexity 3 42 0 1 1695 400 147 0 0 chrX 145555288 145555356 -21094940 - U3 snRNA snRNA -149 68 1 1 1695 288 260 0 0 chrX 145555659 145555736 -21094560 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 1695 707 323 34 24 chrX 145555817 145556109 -21094187 - Lx9 LINE L1 -1067 6577 6283 1 1695 6421 133 27 18 chrX 145556109 145557279 -21093017 - Lx LINE L1 -1 6653 5476 1 1695 855 141 95 0 chrX 145557277 145557498 -21092798 - L1VL2 LINE L1 -444 3470 3219 1 1695 611 88 11 0 chrX 145557498 145557589 -21092707 + (TTCC)n Simple_repeat Simple_repeat 3 94 0 1 1695 6594 96 12 3 chrX 145558079 145559059 -21091237 - L1Md_F2 LINE L1 -1 6581 5593 1 1695 11776 84 19 1 chrX 145559058 145561610 -21088686 - L1Md_F LINE L1 -2898 2985 387 1 1695 6413 143 71 10 chrX 145561612 145563577 -21086719 - L1VL2 LINE L1 -1449 2465 372 1 1695 308 284 12 12 chrX 145563958 145564040 -21086256 + B3A SINE B2 1 82 -116 1 1695 219 360 48 62 chrX 145564040 145564103 -21086193 + ID_B1 SINE B4 1 143 -81 1 1695 204 237 143 13 chrX 145564575 145564652 -21085644 + MIR3 SINE MIR 85 171 -37 1 1695 184 356 14 0 chrX 145565362 145565435 -21084861 - MIRb SINE MIR -75 193 120 1 1695 473 341 29 0 chrX 145566691 145566896 -21083400 - MLT1E2 LTR MaLR -30 597 387 1 1695 818 204 0 14 chrX 145567159 145567303 -21082993 - B1_Mus1 SINE Alu 0 148 7 1 1695 462 79 0 0 chrX 145567321 145567384 -21082912 + (GGGA)n Simple_repeat Simple_repeat 2 64 0 1 1695 258 245 0 0 chrX 145567474 145567527 -21082769 + GA-rich Low_complexity Low_complexity 4 56 0 1 1695 719 316 29 0 chrX 145567814 145568020 -21082276 + ID_B1 SINE B4 3 214 -10 1 1695 264 317 48 38 chrX 145568126 145568231 -21082065 - PB1D10 SINE Alu -35 114 9 1 1695 253 324 27 0 chrX 145568415 145568489 -21081807 - ID4 SINE ID -4 79 4 1 1695 281 93 0 18 chrX 145568868 145568923 -21081373 + (TTGG)n Simple_repeat Simple_repeat 3 56 0 1 1695 224 77 26 0 chrX 145568917 145568956 -21081340 + (TTG)n Simple_repeat Simple_repeat 1 40 0 1 1695 373 248 67 50 chrX 145568956 145569041 -21081255 - ID_B1 SINE B4 -1 223 136 1 1695 3183 61 2 0 chrX 145569041 145569436 -21080860 + MTA_Mm LTR MaLR 1 396 0 1 1695 373 248 67 50 chrX 145569436 145569469 -21080827 - ID_B1 SINE B4 -89 135 103 1 1695 251 238 25 0 chrX 145569517 145569597 -21080699 - L1MB7 LINE L1 -56 6128 6047 1 1695 185 273 0 22 chrX 145570357 145570402 -21079894 - L3 LINE CR1 -2290 2199 2156 1 1695 337 257 18 18 chrX 145570429 145570540 -21079756 + (TCTG)n Simple_repeat Simple_repeat 2 112 0 1 1695 269 348 107 0 chrX 145570564 145570676 -21079620 - B3A SINE B2 -22 176 53 1 1695 354 45 0 0 chrX 145571087 145571131 -21079165 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1695 428 214 45 60 chrX 145571826 145571960 -21078336 - ID_B1 SINE B4 0 224 93 1 1695 369 0 0 0 chrX 145572706 145572747 -21077549 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1 1695 447 92 0 0 chrX 145572865 145572930 -21077366 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 1695 594 91 117 39 chrX 145572960 145573063 -21077233 - BC1_Mm scRNA scRNA -29 123 13 1 1695 225 49 0 0 chrX 145573063 145573104 -21077192 + L1_Mus2 LINE L1 6526 6566 0 1 1695 31 0 0 0 chrX 145573104 145573135 -21077161 + AT_rich Low_complexity Low_complexity 1 31 0 1 1695 608 300 185 10 chrX 145573358 145573649 -21076647 + MTE2a LTR MaLR 1 342 -37 1 1695 341 0 45 0 chrX 145573649 145573693 -21076603 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 1 1695 916 147 0 0 chrX 145573693 145573829 -21076467 - B1_Mus2 SINE Alu -11 136 1 1 1695 340 229 34 68 chrX 145573726 145573843 -21076453 - RLTR25B LTR ERVK -526 502 390 1 1695 189 107 0 0 chrX 145573843 145573871 -21076425 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1695 1106 72 7 0 chrX 145574347 145574500 -21075796 + (TTTC)n Simple_repeat Simple_repeat 4 157 0 1 1695 3675 81 10 4 chrX 145574510 145575018 -21075278 - L1_Mus1 LINE L1 -2 6565 6055 1 1695 570 226 0 0 chrX 145575018 145575124 -21075172 - ID_B1 SINE B4 -18 206 101 1 1695 215 306 0 53 chrX 145575106 145575182 -21075114 - ID2 SINE ID -10 73 2 1 1695 34 24 0 0 chrX 145575524 145575565 -21074731 + AT_rich Low_complexity Low_complexity 1 41 0 1 1695 244 300 25 12 chrX 145575689 145575770 -21074526 + MER20 DNA MER1_type 121 202 -17 1 1695 875 117 51 127 chrX 145576152 145576370 -21073926 - B2_Mm2 SINE B2 -7 188 1 1 1695 295 288 39 85 chrX 145576420 145576549 -21073747 - RSINE1 SINE B4 -31 134 12 1 1695 484 277 41 28 chrX 145576544 145576689 -21073607 - ID_B1 SINE B4 -77 147 1 1 1695 291 295 134 70 chrX 145577943 145578085 -21072211 + MER5A DNA MER1_type 8 158 -31 1 1695 357 272 9 81 chrX 145578206 145578338 -21071958 - B3A SINE B2 -5 193 70 1 1695 307 303 109 36 chrX 145578368 145578505 -21071791 - B1F2 SINE Alu -1 148 2 1 1695 534 126 53 0 chrX 145578573 145578668 -21071628 - L1_Mur2 LINE L1 -2000 3877 3778 1 1695 235 286 24 94 chrX 145578676 145578761 -21071535 - ID4 SINE ID -2 81 3 1 1695 279 288 14 0 chrX 145578905 145578978 -21071318 + ID4_ SINE ID 7 80 -3 1 1695 424 282 81 0 chrX 145579053 145579177 -21071119 + ID_B1 SINE B4 81 214 -10 1 1695 303 268 26 18 chrX 145579216 145579330 -21070966 + PB1D10 SINE Alu 2 116 -1 1 1695 315 49 0 0 chrX 145579342 145579383 -21070913 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1695 250 217 33 16 chrX 145579785 145579846 -21070450 + BC1_Mm scRNA scRNA 22 83 -69 1 1695 284 0 28 0 chrX 145580366 145580402 -21069894 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 1695 316 231 53 53 chrX 145580469 145580583 -21069713 - B4A SINE B4 -173 119 6 1 1695 233 67 0 0 chrX 145580966 145580996 -21069300 - L1_Mus1 LINE L1 -680 5887 5858 1 1695 868 123 19 0 chrX 145580994 145581156 -21069140 + L1_Mm LINE L1 5254 5418 -465 1 1695 2113 147 26 98 chrX 145581159 145581294 -21069002 - L1_Mur1 LINE L1 -2340 3546 3423 1 1695 1520 134 57 18 chrX 145581294 145581576 -21068720 - Lx LINE L1 -4 6650 6358 1 1695 2113 147 26 98 chrX 145581576 145581983 -21068313 - L1_Mur1 LINE L1 -2464 3422 3043 1 1695 186 0 47 93 chrX 145581995 145582038 -21068258 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 1 1695 4529 69 2 17 chrX 145582052 145582653 -21067643 - L1Md_F2 LINE L1 -2 6580 5989 1 1695 241 347 60 20 chrX 145582820 145582920 -21067376 - B1F SINE Alu -29 120 17 1 1695 224 268 126 35 chrX 145582968 145583101 -21067195 - B1_Mm SINE Alu -2 146 3 1 1695 216 224 16 65 chrX 145583189 145583251 -21067045 + B4 SINE B4 15 73 -219 1 1695 1926 72 15 4 chrX 145583553 145583818 -21066478 - RLTR1C LTR ERV1 0 503 236 1 1695 705 10 105 48 chrX 145583817 145583922 -21066374 - RLTR1C LTR ERV1 -392 111 1 1 1695 13622 92 43 22 chrX 145583922 145586075 -21064221 - MMVL30-int LTR ERV1 0 3698 1501 1 1695 387 0 0 0 chrX 145586220 145586263 -21064033 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1695 387 0 0 0 chrX 145586263 145586305 -21063991 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1695 467 154 54 141 chrX 145586409 145586694 -21063602 - MMVL30-int LTR ERV1 -2190 1508 960 1 1695 4447 129 11 4 chrX 145586759 145587492 -21062804 - MMVL30-int LTR ERV1 -2245 1453 716 1 1695 223 193 35 17 chrX 145587823 145587881 -21062415 + (CAAA)n Simple_repeat Simple_repeat 4 62 0 1 1695 2548 180 9 35 chrX 145587919 145588466 -21061830 - MMVL30-int LTR ERV1 -7023 533 1 1 1695 3814 84 4 0 chrX 145588466 145588967 -21061329 - RLTR1C LTR ERV1 0 503 1 1 1695 283 221 59 0 chrX 145589058 145589126 -21061170 + B3 SINE B2 125 196 -20 1 1695 340 168 75 0 chrX 145589128 145589235 -21061061 + Lx2A1 LINE L1 6893 7007 -1 1 1695 335 281 60 17 chrX 145589297 145589413 -21060883 + ID_B1 SINE B4 9 129 -95 1 1695 1503 236 48 48 chrX 145589413 145589853 -21060443 + Lx LINE L1 6143 6582 -72 1 1695 214 358 26 93 chrX 145589874 145590025 -21060271 + B4A SINE B4 1 141 -151 1 1695 474 49 0 0 chrX 145590151 145590212 -21060084 + (TC)n Simple_repeat Simple_repeat 1 61 0 1 1695 270 0 0 0 chrX 145590212 145590241 -21060055 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1695 191 36 0 35 chrX 145590403 145590432 -21059864 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1695 293 288 0 0 chrX 145590473 145590539 -21059757 - ID2 SINE ID -17 66 1 1 1695 468 309 120 5 chrX 145590571 145590763 -21059533 - ID_B1 SINE B4 -9 215 2 1 1695 662 328 12 6 chrX 145591894 145592066 -21058230 + ID_B1 SINE B4 6 178 -46 1 1695 1272 93 22 11 chrX 145594105 145594289 -21056007 - B2_Mm2 SINE B2 -9 186 1 1 1695 360 149 15 0 chrX 145594337 145594404 -21055892 - U3 snRNA snRNA -149 68 1 1 1695 233 254 0 0 chrX 145594700 145594755 -21055541 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1695 532 336 24 8 chrX 145594848 145595094 -21055202 - Lx9 LINE L1 -1067 6577 6328 1 1695 8098 110 5 1 chrX 145595114 145597126 -21053170 + L1_Mus1 LINE L1 4547 6564 -3 1 1695 381 134 15 0 chrX 145598502 145598569 -21051727 - U3 snRNA snRNA -149 68 1 1 1695 263 273 0 0 chrX 145598872 145598949 -21051347 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 1695 604 306 16 5 chrX 145599030 145599224 -21051072 - Lx9 LINE L1 -1067 6577 6382 1 1695 10988 150 28 28 chrX 145599317 145600650 -21049646 - Lx LINE L1 -1 6653 5345 1 1695 693 0 0 0 chrX 145600650 145600727 -21049569 + (TTTC)n Simple_repeat Simple_repeat 4 80 0 2 1695 14608 115 17 41 chrX 145600727 145603637 -21046659 - Lx LINE L1 -542 5344 2612 1 1695 9407 80 3 36 chrX 145603633 145604414 -21045882 - L1_Mus1 LINE L1 -118 6449 5676 2 1695 2928 95 8 0 chrX 145604414 145604815 -21045481 + L1_Mus1 LINE L1 6162 6565 -2 2 1695 9407 124 6 20 chrX 145604815 145606182 -21044114 - L1_Mus1 LINE L1 -208 5675 4326 2 1695 2842 164 28 55 chrX 145606170 145606849 -21043447 - L1_Mur1 LINE L1 -2823 3063 2403 2 1695 1070 167 23 7 chrX 145606851 145607164 -21043132 - L1_Mur1 LINE L1 -4500 1386 1068 2 1695 1583 207 87 143 chrX 145607164 145607682 -21042614 + RMER19B LTR ERVK 1 489 -413 2 1695 305 287 83 118 chrX 145608193 145608422 -21041874 - MLT2B5 LTR ERVL -261 340 120 2 1695 523 293 47 42 chrX 145608299 145608491 -21041805 - MTEa LTR MaLR -165 214 22 2 1695 406 270 197 0 chrX 145608644 145608781 -21041515 + MER5A1 DNA MER1_type 1 164 -2 2 1695 191 329 23 58 chrX 145609125 145609212 -21041084 + MIRm SINE MIR 85 168 -108 2 1695 257 414 27 0 chrX 145609520 145609631 -21040665 + MLT1H1 LTR MaLR 315 428 -127 2 1695 4101 155 29 2 chrX 145609828 145610749 -21039547 - Lx5 LINE L1 -1062 5988 5024 2 1695 387 89 0 0 chrX 145610750 145610806 -21039490 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1695 4064 216 58 6 chrX 145610810 145611668 -21038628 + Lx5 LINE L1 6148 7050 0 2 1695 332 294 118 0 chrX 145611840 145611942 -21038354 + PB1 SINE Alu 14 127 0 2 1695 1739 145 14 3 chrX 145612109 145612406 -21037890 - L1_Mus3 LINE L1 -1 6637 6338 2 1695 1345 177 4 0 chrX 145612409 145612641 -21037655 + L1_Mm LINE L1 5411 5643 -240 2 1695 333 242 158 0 chrX 145612643 145612763 -21037533 + B3 SINE B2 53 191 -25 2 1695 566 149 8 0 chrX 145613984 145614118 -21036178 + (TG)n Simple_repeat Simple_repeat 1 135 0 2 1695 319 289 0 66 chrX 145614301 145614423 -21035873 + PB1D9 SINE Alu 5 118 -2 2 1695 315 322 40 33 chrX 145615229 145615380 -21034916 - B4 SINE B4 -18 274 123 2 1695 418 343 0 0 chrX 145615478 145615612 -21034684 - RSINE1 SINE B4 -29 136 3 2 1695 218 246 18 0 chrX 145615946 145616003 -21034293 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 2 1695 261 301 67 19 chrX 145616199 145616304 -21033992 - ID_B1 SINE B4 -7 217 108 2 1695 464 270 113 30 chrX 145616810 145616978 -21033318 + B3 SINE B2 24 205 -11 2 1695 2402 132 136 36 chrX 145618044 145618516 -21031780 + MURVY-LTR LTR ERV1 1 519 0 2 211 6248 302 43 39 chrX 145618516 145621893 -21028403 + MuRRS4-int LTR ERV1 3 3494 -4062 2 1696 2624 10 0 0 chrX 145621893 145622183 -21028113 - L1Md_A LINE L1 0 6582 6293 2 1696 2597 10 17 10 chrX 145622183 145622482 -21027814 + L1Md_A LINE L1 6004 6304 -278 2 1696 6725 289 18 18 chrX 145622482 145624512 -21025784 + MuRRS4-int LTR ERV1 2243 4272 -791 2 1696 2769 121 90 33 chrX 145624803 145625292 -21025004 + MURVY-LTR LTR ERV1 1 517 -2 2 1696 767 152 6 0 chrX 145625462 145625640 -21024656 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 1696 349 269 8 25 chrX 145625839 145625957 -21024339 + PB1D9 SINE Alu 5 120 0 2 1696 230 326 20 46 chrX 145626453 145626604 -21023692 - B4 SINE B4 -36 256 110 2 1696 403 317 14 27 chrX 145626722 145626868 -21023428 - RSINE1 SINE B4 -19 146 3 2 1696 5397 91 5 7 chrX 145627452 145628201 -21022095 + L1Md_F2 LINE L1 5835 6582 0 2 1696 212 167 0 0 chrX 145628434 145628470 -21021826 + B4 SINE B4 38 73 -219 2 1696 325 25 0 0 chrX 145628774 145628814 -21021482 - RLTR1C LTR ERV1 0 503 464 2 1696 306 320 31 0 chrX 145628807 145628904 -21021392 + B1F SINE Alu 29 128 -21 2 1696 237 182 54 18 chrX 145628915 145628971 -21021325 + Lx6 LINE L1 6524 6581 -879 2 1696 578 278 140 43 chrX 145628972 145629179 -21021117 + Lx5 LINE L1 6480 6706 -344 2 1696 5254 107 12 8 chrX 145629453 145630209 -21020087 - L1_Mus1 LINE L1 -2 6565 5807 2 1696 3025 120 2 9 chrX 145630471 145631021 -21019275 - L1_Mus3 LINE L1 -684 5954 5407 2 1696 1945 120 7 10 chrX 145631021 145631323 -21018973 + L1_Mus3 LINE L1 6338 6638 0 2 1696 3025 165 0 10 chrX 145631323 145631356 -21018940 - L1_Mus3 LINE L1 -477 5406 5375 2 1696 265 307 36 13 chrX 145631485 145631595 -21018701 - B1F SINE Alu -2 115 7 2 1696 3227 212 53 7 chrX 145631760 145632436 -21017860 - Lx4B LINE L1 0 7058 6352 2 1696 269 338 75 23 chrX 145632486 145632619 -21017677 - MLT1L LTR MaLR -160 450 311 2 1696 359 258 107 8 chrX 145632958 145633079 -21017217 - ID_B1 SINE B4 -91 133 1 2 1696 747 311 12 4 chrX 145633123 145633378 -21016918 - Lx7 LINE L1 -396 7300 7044 2 1696 236 296 28 75 chrX 145634164 145634270 -21016026 + MER5A DNA MER1_type 80 180 -9 2 1696 1094 90 7 0 chrX 145634333 145634477 -21015819 + B1_Mm SINE Alu 3 147 0 2 1696 500 260 32 0 chrX 145634600 145634723 -21015573 + B1F1 SINE Alu 6 132 -17 2 1696 297 0 0 0 chrX 145634732 145634765 -21015531 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 2 1696 620 238 7 7 chrX 145635125 145635269 -21015027 + B1_Mur3 SINE Alu 6 149 0 2 1696 23 54 0 0 chrX 145635269 145635306 -21014990 + AT_rich Low_complexity Low_complexity 1 37 0 2 1696 232 348 0 71 chrX 145635364 145635463 -21014833 + PB1D10 SINE Alu 24 115 -2 2 1696 319 349 0 0 chrX 145635489 145635621 -21014675 + L1MC2 LINE L1 6100 6231 -113 2 1696 489 90 90 0 chrX 145635742 145635820 -21014476 - RMER19A LTR ERVK 0 737 653 2 1696 188 125 0 59 chrX 145635863 145635914 -21014382 + (TTAA)n Simple_repeat Simple_repeat 2 49 0 2 1696 2936 41 3 0 chrX 145635978 145636323 -21013973 + ORR1A0 LTR MaLR 1 346 0 2 1696 333 316 31 0 chrX 145636417 145636515 -21013781 + B4A SINE B4 1 101 -191 2 1696 494 275 135 20 chrX 145636584 145636836 -21013460 + L1MB8 LINE L1 5742 6022 -156 2 1696 3152 49 13 0 chrX 145636946 145637335 -21012961 - MTA_Mm LTR MaLR 0 396 3 2 1696 519 295 0 0 chrX 145637339 145637478 -21012818 + ID_B1 SINE B4 86 224 0 2 1696 578 270 208 22 chrX 145637844 145638113 -21012183 + Lx8 LINE L1 7121 7439 -34 2 1696 1727 199 25 11 chrX 145638359 145638719 -21011577 - ORR1B2 LTR MaLR -2 365 1 2 1696 414 133 0 0 chrX 145638861 145638951 -21011345 + (A)n Simple_repeat Simple_repeat 1 90 0 2 1696 3672 188 62 88 chrX 145638957 145639883 -21010413 + RMER19B LTR ERVK 1 902 0 2 1696 451 233 8 33 chrX 145641286 145641406 -21008890 - ID_B1 SINE B4 -4 220 104 2 1696 839 294 0 34 chrX 145642005 145642241 -21008055 + MTEa LTR MaLR 24 251 -128 2 1696 602 145 7 101 chrX 145642303 145642441 -21007855 - URR1B DNA MER1_type -100 125 1 2 1696 662 166 92 6 chrX 145642913 145643077 -21007219 + Lx9 LINE L1 7465 7642 -2 2 1696 788 250 50 10 chrX 145643318 145643520 -21006776 + B3 SINE B2 1 210 -6 2 1696 308 309 80 14 chrX 145643556 145643694 -21006602 + ID_B1 SINE B4 70 216 -8 2 1696 657 76 0 0 chrX 145643708 145643800 -21006496 + (GA)n Simple_repeat Simple_repeat 1 92 0 2 1696 411 38 0 0 chrX 145643911 145643964 -21006332 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1696 265 300 0 59 chrX 145644560 145644645 -21005651 + ID4_ SINE ID 2 81 -2 2 1696 782 188 7 0 chrX 145644695 145644833 -21005463 + B1_Mur4 SINE Alu 5 143 -7 2 1696 234 0 0 0 chrX 145644837 145644863 -21005433 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 1696 430 261 143 7 chrX 145644912 145645066 -21005230 - ID_B1 SINE B4 -47 177 3 2 1696 4638 99 11 1 chrX 145647731 145648400 -21001896 + L1_Mus3 LINE L1 5959 6633 -5 2 1696 32565 81 4 3 chrX 145648408 145653634 -20996662 + L1Md_F2 LINE L1 266 5589 -297 2 1696 7880 58 2 2 chrX 145653634 145654616 -20995680 + L1Md_F2 LINE L1 5590 6571 -14 2 1696 2811 98 100 18 chrX 145654898 145655228 -20995068 + RMER17D LTR ERVK 1 336 -553 2 1696 963 123 0 27 chrX 145655228 145655412 -20994884 + CT-rich Low_complexity Low_complexity 2 180 0 2 1696 2811 98 100 18 chrX 145655412 145655591 -20994705 + RMER17D LTR ERVK 337 552 -337 2 1696 2804 73 0 3 chrX 145655974 145656333 -20993963 - L1_Mus1 LINE L1 0 6567 6210 2 1696 1993 129 9 9 chrX 145656334 145656677 -20993619 + RMER17D LTR ERVK 547 889 0 2 1696 417 161 0 11 chrX 145656677 145656765 -20993531 - Lx LINE L1 -12 6642 6556 2 1696 429 156 0 0 chrX 145657148 145657225 -20993071 + (CCCA)n Simple_repeat Simple_repeat 3 79 0 2 1696 195 371 50 6 chrX 145657225 145657385 -20992911 - L2a LINE L2 0 3426 3260 2 1696 552 281 213 3 chrX 145660264 145660560 -20989736 - L1MC1 LINE L1 -13 6320 5963 2 1696 21 89 0 0 chrX 145661328 145661384 -20988912 + AT_rich Low_complexity Low_complexity 1 56 0 2 1696 228 297 0 0 chrX 145662091 145662165 -20988131 + PB1D10 SINE Alu 42 115 -2 2 1696 5827 110 19 5 chrX 145662307 145663938 -20986358 - L1VL2 LINE L1 -1789 1826 172 2 1696 283 276 24 87 chrX 145663935 145664062 -20986234 - L1MC1 LINE L1 -390 5954 5836 2 1696 256 333 0 0 chrX 145664124 145664205 -20986091 - ID4_ SINE ID 0 83 3 2 1696 220 125 41 20 chrX 145664392 145664441 -20985855 + A-rich Low_complexity Low_complexity 2 51 0 2 1696 380 248 23 62 chrX 145664520 145664649 -20985647 - L1MCa LINE L1 -5875 633 510 2 1696 280 255 20 50 chrX 145664833 145664932 -20985364 - PB1 SINE Alu -3 124 29 2 1696 561 303 87 19 chrX 145665016 145665282 -20985014 - L1MCa LINE L1 -6220 288 5 2 1696 381 258 89 22 chrX 145665509 145665644 -20984652 - B1F2 SINE Alu 0 149 6 2 1696 312 263 40 0 chrX 145665784 145665883 -20984413 + MER53 DNA hAT 91 193 0 2 1696 711 35 0 0 chrX 145666070 145666156 -20984140 + (TCCC)n Simple_repeat Simple_repeat 3 88 0 2 1696 359 89 0 18 chrX 145666201 145666258 -20984038 + (TCCC)n Simple_repeat Simple_repeat 4 59 0 2 1696 300 320 15 46 chrX 145666355 145666486 -20983810 + LTR16A1 LTR ERVL 55 181 -275 2 1696 186 103 0 0 chrX 145666508 145666537 -20983759 + (TCTCCC)n Simple_repeat Simple_repeat 1 29 0 2 1696 1032 233 79 76 chrX 145666757 145666804 -20983492 + ORR1D1 LTR MaLR 1 38 -336 2 1696 1104 73 0 0 chrX 145666804 145666941 -20983355 + B1_Mus1 SINE Alu 3 139 -9 2 1696 196 53 26 26 chrX 145666941 145666980 -20983316 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1696 1143 227 79 76 chrX 145666980 145667178 -20983118 + ORR1D1 LTR MaLR 39 230 -144 2 1696 186 71 0 0 chrX 145667178 145667206 -20983090 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 3 1696 1143 227 79 76 chrX 145667206 145667325 -20982971 + ORR1D1 LTR MaLR 231 366 -8 2 1696 1891 144 0 45 chrX 145667571 145667884 -20982412 + Lx3B LINE L1 6672 6970 -3 3 1696 338 282 0 0 chrX 145668170 145668241 -20982055 + B1F SINE Alu 21 91 -58 3 1696 661 199 21 35 chrX 145668367 145668508 -20981788 + B1_Mur3 SINE Alu 5 143 -6 3 1696 422 298 20 66 chrX 145668553 145668704 -20981592 + RSINE1 SINE B4 5 148 -17 3 1696 300 53 0 0 chrX 145668714 145668752 -20981544 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 3 1696 1708 251 68 14 chrX 145668777 145669206 -20981090 - Lx6 LINE L1 -179 7281 6830 3 1696 782 291 39 0 chrX 145669522 145669725 -20980571 - ID_B1 SINE B4 -12 212 2 3 1696 2583 139 17 7 chrX 145669774 145670181 -20980115 + Lx2A LINE L1 6589 6999 -9 3 1696 273 57 0 0 chrX 145670181 145670216 -20980080 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1696 391 298 38 80 chrX 145670247 145670501 -20979795 + B3 SINE B2 48 209 -7 3 1696 181 212 0 43 chrX 145671460 145671529 -20978767 + A-rich Low_complexity Low_complexity 4 69 0 3 1696 260 184 102 0 chrX 145671658 145671707 -20978589 - ID_B1 SINE B4 -17 207 154 3 1696 275 303 36 28 chrX 145671880 145671981 -20978315 + B1F1 SINE Alu 19 118 -2 3 1696 441 252 210 8 chrX 145671985 145672109 -20978187 + B3 SINE B2 3 151 -65 3 1696 6244 25 0 0 chrX 145672250 145672963 -20977333 - L1_Mm LINE L1 -195 5688 4976 3 1696 1270 21 0 0 chrX 145672964 145673109 -20977187 + L1Md_A LINE L1 6436 6580 -2 3 1696 576 156 0 0 chrX 145673295 145673404 -20976892 + (TCTA)n Simple_repeat Simple_repeat 1 109 0 3 1696 849 258 19 15 chrX 145673418 145673623 -20976673 - ID_B1 SINE B4 -17 207 2 3 1696 335 335 63 96 chrX 145673828 145674212 -20976084 - ORR1E LTR MaLR 0 370 1 3 1696 520 326 0 7 chrX 145674343 145674491 -20975805 + B1F1 SINE Alu 1 147 -2 3 1696 366 295 18 37 chrX 145674629 145674738 -20975558 + B3A SINE B2 1 107 -91 3 1696 21 36 0 0 chrX 145674761 145674789 -20975507 + AT_rich Low_complexity Low_complexity 1 28 0 3 1696 670 354 18 4 chrX 145674825 145675052 -20975244 + B4A SINE B4 2 231 -61 3 1696 541 295 25 19 chrX 145675053 145675212 -20975084 + RSINE1 SINE B4 6 165 0 3 1696 259 190 0 79 chrX 145675252 145675315 -20974981 + B4A SINE B4 235 292 0 3 1696 326 238 12 70 chrX 145675508 145675594 -20974702 - ID4 SINE ID 0 83 3 3 1696 277 295 95 35 chrX 145675609 145675725 -20974571 + MER58B DNA MER1_type 172 294 -47 3 1696 385 344 24 8 chrX 145676138 145676261 -20974035 - B4A SINE B4 -166 126 2 3 1696 299 286 0 16 chrX 145676808 145676904 -20973392 + ID4 SINE ID 9 102 -50 3 1696 428 202 7 118 chrX 145677060 145677195 -20973101 + MT2B LTR ERVL 145 264 -337 3 1696 771 157 0 8 chrX 145677090 145677218 -20973078 + B1_Mus2 SINE Alu 9 135 -12 3 1696 1086 100 0 0 chrX 145677219 145677399 -20972897 + (GA)n Simple_repeat Simple_repeat 1 180 0 3 1696 200 280 0 0 chrX 145677410 145677460 -20972836 + GA-rich Low_complexity Low_complexity 5 54 0 3 1696 226 235 0 19 chrX 145677468 145677520 -20972776 + B3A SINE B2 1 51 -147 3 1696 208 354 31 10 chrX 145678024 145678121 -20972175 - MIRb SINE MIR -50 218 120 3 1696 3543 133 39 23 chrX 145678810 145679885 -20970411 + RLTR13D1 LTR ERVK 1 788 -18 3 1696 525 329 28 5 chrX 145680421 145680638 -20969658 - MLT1E2 LTR MaLR -30 597 376 3 1696 536 0 16 0 chrX 145680879 145680943 -20969353 + (TTTTG)n Simple_repeat Simple_repeat 1 65 0 3 1696 822 178 0 0 chrX 145680943 145681072 -20969224 - B1_Mus1 SINE Alu -13 135 7 3 1696 549 0 0 0 chrX 145681091 145681152 -20969144 + (GGAA)n Simple_repeat Simple_repeat 2 62 0 3 1696 230 263 18 0 chrX 145681188 145681245 -20969051 + ID4_ SINE ID 24 81 -2 3 1696 219 293 40 0 chrX 145681245 145681258 -20969038 + ID_B1 SINE B4 25 97 -127 3 1696 808 302 19 0 chrX 145681597 145681802 -20968494 + ID_B1 SINE B4 3 211 -13 3 1696 216 265 105 35 chrX 145681931 145682017 -20968279 - B1F2 SINE Alu -49 100 9 3 1696 226 82 19 58 chrX 145682624 145682676 -20967620 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 3 1696 369 287 70 0 chrX 145682676 145682791 -20967505 - ID_B1 SINE B4 0 224 102 3 1696 225 222 32 0 chrX 145682854 145682917 -20967379 - L1MB7 LINE L1 -73 6111 6047 3 1696 270 203 0 30 chrX 145683742 145683808 -20966488 + (TCTCTG)n Simple_repeat Simple_repeat 5 68 0 3 1696 204 182 0 0 chrX 145683818 145683862 -20966434 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 3 1696 269 287 245 0 chrX 145683919 145684013 -20966283 - B3A SINE B2 -80 118 2 3 1696 265 268 26 90 chrX 145684683 145684761 -20965535 + RSINE1 SINE B4 92 164 -1 3 1696 614 71 0 0 chrX 145684816 145684900 -20965396 - BC1_Mm scRNA scRNA -56 96 13 3 1696 264 31 4 45 chrX 145684900 145684954 -20965342 + L1_Mus2 LINE L1 6526 6581 -1 3 1696 617 293 191 17 chrX 145685194 145685487 -20964809 + MTE2a LTR MaLR 1 344 -35 3 1696 190 27 51 51 chrX 145685487 145685526 -20964770 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 3 1696 1080 132 0 0 chrX 145685527 145685671 -20964625 - B1_Mus2 SINE Alu -3 144 1 3 1696 287 276 0 0 chrX 145685987 145686045 -20964251 - PB1D10 SINE Alu -37 80 23 3 1696 363 44 0 0 chrX 145686053 145686098 -20964198 + (CCCTG)n Simple_repeat Simple_repeat 2 46 0 3 1696 531 90 0 0 chrX 145686266 145686344 -20963952 + (TC)n Simple_repeat Simple_repeat 2 79 0 3 1696 322 273 86 50 chrX 145686346 145686359 -20963937 - B1F2 SINE Alu 0 149 132 3 1696 4165 71 2 2 chrX 145686359 145686870 -20963426 - L1_Mus1 LINE L1 -2 6565 6055 3 1696 322 273 86 50 chrX 145686870 145686995 -20963301 - B1F2 SINE Alu -18 131 6 3 1696 525 268 264 6 chrX 145686995 145687033 -20963263 - ID_B1 SINE B4 -18 206 2 3 1696 2029 62 88 0 chrX 145687232 145687506 -20962790 - L1Md_F2 LINE L1 -526 6056 5759 3 1696 3071 108 87 46 chrX 145688268 145688765 -20961531 + MURVY-LTR LTR ERV1 1 517 -2 3 1696 352 286 50 72 chrX 145688767 145689059 -20961237 + RLTR6-int LTR ERV1 3 268 -7510 3 1696 4326 284 24 36 chrX 145689106 145690863 -20959433 + RLTR6-int LTR ERV1 343 2336 -5442 3 1696 5039 314 33 32 chrX 145690998 145694020 -20956276 + RLTR6-int LTR ERV1 2632 5290 -2311 3 1696 2626 143 124 34 chrX 145694292 145694768 -20955528 + MURVY-LTR LTR ERV1 1 519 0 3 1696 341 184 9 0 chrX 145694932 145695046 -20955250 + (TG)n Simple_repeat Simple_repeat 1 115 0 3 1696 345 252 16 73 chrX 145695223 145695347 -20954949 + PB1D9 SINE Alu 2 118 -2 3 1696 2352 98 241 29 chrX 145695849 145696301 -20953995 + RLTR6_Mm LTR ERV1 37 584 -70 3 1696 307 304 42 60 chrX 145696713 145696881 -20953415 - B4 SINE B4 -18 274 110 3 1696 407 345 14 27 chrX 145696953 145697099 -20953197 - RSINE1 SINE B4 -19 146 3 3 1696 237 167 0 0 chrX 145697933 145697969 -20952327 + B4 SINE B4 38 73 -219 3 1696 3909 91 0 18 chrX 145698273 145698785 -20951511 - RLTR1C LTR ERV1 0 503 1 3 1696 409 306 109 29 chrX 145698818 145698993 -20951303 + B3 SINE B2 24 212 -4 3 1696 282 143 0 0 chrX 145700194 145700257 -20950039 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1696 319 291 0 57 chrX 145700512 145700636 -20949660 + PB1D9 SINE Alu 2 118 -2 3 1696 279 357 51 34 chrX 145701423 145701600 -20948696 - B4 SINE B4 -3 289 110 3 1696 275 364 32 32 chrX 145701663 145701819 -20948477 - RSINE1 SINE B4 -7 158 3 3 1696 219 282 14 0 chrX 145701839 145701910 -20948386 - B4 SINE B4 -216 76 5 3 1696 241 304 76 29 chrX 145702437 145702542 -20947754 - ID_B1 SINE B4 -7 217 108 3 1696 246 159 23 0 chrX 145702673 145702717 -20947579 + B4 SINE B4 29 73 -219 3 1696 3803 106 4 6 chrX 145703021 145703524 -20946772 - RLTR1C LTR ERV1 0 503 2 3 1696 511 235 123 32 chrX 145703558 145703712 -20946584 + B3 SINE B2 24 191 -25 3 1696 469 178 6 6 chrX 145704926 145705084 -20945212 + (TG)n Simple_repeat Simple_repeat 1 158 0 3 1696 382 280 8 25 chrX 145705262 145705383 -20944913 + PB1D9 SINE Alu 2 120 0 3 1696 28 48 0 0 chrX 145705519 145705561 -20944735 + AT_rich Low_complexity Low_complexity 1 42 0 3 1696 340 341 22 38 chrX 145706180 145706363 -20943933 - B4 SINE B4 -3 289 110 3 1696 465 302 35 41 chrX 145706436 145706581 -20943715 - RSINE1 SINE B4 -19 146 3 3 1696 629 114 8 0 chrX 145707749 145707872 -20942424 + (TG)n Simple_repeat Simple_repeat 1 124 0 3 1696 287 336 0 27 chrX 145708098 145708208 -20942088 + PB1D9 SINE Alu 2 108 -12 3 1696 243 0 0 0 chrX 145708211 145708238 -20942058 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1696 182 111 0 62 chrX 145708655 145708703 -20941593 + T-rich Low_complexity Low_complexity 1 45 0 3 1696 180 0 0 0 chrX 145708701 145708721 -20941575 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1696 251 330 48 0 chrX 145709914 145710017 -20940279 + PB1D7 SINE Alu 3 110 -10 3 1696 1318 154 53 19 chrX 145710178 145710443 -20939853 + Lx2A1 LINE L1 6733 7006 -2 3 1696 288 274 0 27 chrX 145710505 145710580 -20939716 + tRNA-Ala-GCY_ tRNA tRNA 3 75 0 3 1696 375 229 3 21 chrX 145710580 145710591 -20939705 + ID SINE ID 9 88 -204 3 1696 2172 215 45 43 chrX 145710612 145711126 -20939170 + Lx LINE L1 6134 6648 -6 3 1696 2438 177 12 31 chrX 145711109 145711296 -20939000 + L1_Mm LINE L1 5275 5461 -422 3 1696 1216 140 64 18 chrX 145711296 145711514 -20938782 + L1_Mus3 LINE L1 6407 6634 -4 3 1696 2438 177 12 31 chrX 145711514 145711809 -20938487 + L1_Mm LINE L1 5462 5748 -135 3 1696 1961 151 23 3 chrX 145711802 145712147 -20938149 - L1_Mur2 LINE L1 -576 5301 4950 3 1696 217 279 0 29 chrX 145712510 145712580 -20937716 + (TATG)n Simple_repeat Simple_repeat 3 70 0 4 1696 517 309 7 137 chrX 145712630 145712688 -20937608 - B4 SINE B4 -26 266 217 4 1696 228 35 0 0 chrX 145712688 145712717 -20937579 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 1696 517 309 7 137 chrX 145712717 145712874 -20937422 - B4 SINE B4 -76 216 77 4 1696 350 313 105 33 chrX 145712874 145713026 -20937270 - RSINE1 SINE B4 0 165 3 4 1696 517 309 7 137 chrX 145713026 145713101 -20937195 - B4 SINE B4 -216 76 13 4 1696 21 57 0 0 chrX 145713188 145713223 -20937073 + AT_rich Low_complexity Low_complexity 1 35 0 4 1696 4096 253 34 28 chrX 145713545 145714824 -20935472 - Lx9 LINE L1 -18 7626 6184 4 1696 1092 111 0 0 chrX 145714824 145714995 -20935301 + (TA)n Simple_repeat Simple_repeat 2 172 0 4 1696 909 331 84 67 chrX 145714995 145715473 -20934823 - Lx9 LINE L1 -1290 6183 5715 4 1696 330 250 0 85 chrX 145715451 145715569 -20934727 - L1_Rod LINE L1 -1525 4322 4215 4 1696 606 274 145 4 chrX 145715779 145716021 -20934275 + Lx8 LINE L1 7196 7471 -2 4 1696 277 286 91 45 chrX 145716047 145716135 -20934161 + B3A SINE B2 25 116 -82 4 1696 540 0 0 0 chrX 145716186 145716246 -20934050 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1696 362 328 8 39 chrX 145717459 145717586 -20932710 - B1F SINE Alu -1 148 26 4 1696 589 306 61 1 chrX 145717929 145718102 -20932194 + B3A SINE B2 2 188 -28 4 1696 495 33 0 0 chrX 145718102 145718163 -20932133 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 1696 583 312 82 10 chrX 145718163 145718183 -20932113 + B3 SINE B2 189 208 -8 4 1696 347 292 201 54 chrX 145718397 145718621 -20931675 + B4A SINE B4 7 263 -29 4 1696 627 14 0 0 chrX 145718660 145718732 -20931564 + (TC)n Simple_repeat Simple_repeat 2 73 0 4 1696 276 53 0 0 chrX 145718734 145718772 -20931524 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1696 207 135 37 37 chrX 145718936 145718990 -20931306 + T-rich Low_complexity Low_complexity 3 56 0 4 1696 381 342 125 0 chrX 145719127 145719279 -20931017 - ID_B1 SINE B4 -52 172 2 4 1696 216 289 0 0 chrX 145719827 145719879 -20930417 - ID4_ SINE ID -26 57 6 4 1696 643 323 57 5 chrX 145720436 145720629 -20929667 + ID_B1 SINE B4 6 208 -16 4 1696 204 225 0 0 chrX 145720943 145720983 -20929313 + GA-rich Low_complexity Low_complexity 3 42 0 4 1696 400 147 0 0 chrX 145722132 145722200 -20928096 - U3 snRNA snRNA -149 68 1 4 1696 288 260 0 0 chrX 145722503 145722580 -20927716 + (TG)n Simple_repeat Simple_repeat 2 78 0 4 1696 604 323 34 24 chrX 145722661 145722953 -20927343 - Lx9 LINE L1 -1067 6577 6283 4 1696 5952 133 27 18 chrX 145722953 145724123 -20926173 - Lx LINE L1 -1 6653 5476 4 1696 855 141 95 0 chrX 145724121 145724342 -20925954 - L1VL2 LINE L1 -444 3470 3219 4 1696 647 84 11 0 chrX 145724342 145724437 -20925859 + (TTCC)n Simple_repeat Simple_repeat 3 98 0 4 1696 6581 96 13 3 chrX 145724927 145725906 -20924390 - L1Md_F2 LINE L1 -1 6581 5593 4 1696 11757 84 19 2 chrX 145725905 145728460 -20921836 - L1Md_F LINE L1 -2898 2985 387 4 1696 6402 143 71 10 chrX 145728462 145730427 -20919869 - L1VL2 LINE L1 -1449 2465 372 4 1696 308 284 12 12 chrX 145730808 145730890 -20919406 + B3A SINE B2 1 82 -116 4 1696 219 360 48 62 chrX 145730890 145730953 -20919343 + ID_B1 SINE B4 1 143 -81 4 1696 204 237 143 13 chrX 145731425 145731502 -20918794 + MIR3 SINE MIR 85 171 -37 4 1696 184 356 14 0 chrX 145732212 145732285 -20918011 - MIRb SINE MIR -75 193 120 4 1696 473 341 29 0 chrX 145733541 145733746 -20916550 - MLT1E2 LTR MaLR -30 597 387 4 1696 818 204 0 14 chrX 145734009 145734153 -20916143 - B1_Mus1 SINE Alu 0 148 7 4 1696 462 79 0 0 chrX 145734171 145734234 -20916062 + (GGGA)n Simple_repeat Simple_repeat 2 64 0 4 1696 258 245 0 0 chrX 145734324 145734377 -20915919 + GA-rich Low_complexity Low_complexity 4 56 0 4 1696 719 316 29 0 chrX 145734664 145734870 -20915426 + ID_B1 SINE B4 3 214 -10 4 1696 237 321 24 12 chrX 145734997 145735082 -20915214 - PB1D10 SINE Alu -23 94 9 4 1696 253 324 27 0 chrX 145735266 145735340 -20914956 - ID4 SINE ID -4 79 4 4 1696 254 98 0 19 chrX 145735720 145735772 -20914524 + (TTTG)n Simple_repeat Simple_repeat 1 51 0 4 1696 224 77 26 0 chrX 145735768 145735807 -20914489 + (TTG)n Simple_repeat Simple_repeat 1 40 0 4 1696 373 248 67 50 chrX 145735807 145735892 -20914404 - ID_B1 SINE B4 -1 223 136 4 1696 3183 61 2 0 chrX 145735892 145736287 -20914009 + MTA_Mm LTR MaLR 1 396 0 4 1696 373 248 67 50 chrX 145736287 145736320 -20913976 - ID_B1 SINE B4 -89 135 103 4 1696 251 238 25 0 chrX 145736368 145736448 -20913848 - L1MB7 LINE L1 -56 6128 6047 4 1696 185 273 0 22 chrX 145737208 145737253 -20913043 - L3 LINE CR1 -2290 2199 2156 4 1696 337 257 18 18 chrX 145737280 145737391 -20912905 + (TCTG)n Simple_repeat Simple_repeat 2 112 0 4 1696 269 348 107 0 chrX 145737415 145737527 -20912769 - B3A SINE B2 -22 176 53 4 1696 354 45 0 0 chrX 145737938 145737982 -20912314 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1696 428 214 45 60 chrX 145738677 145738811 -20911485 - ID_B1 SINE B4 0 224 93 4 1696 369 0 0 0 chrX 145739557 145739598 -20910698 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 4 1696 447 92 0 0 chrX 145739716 145739781 -20910515 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1696 594 91 117 39 chrX 145739811 145739914 -20910382 - BC1_Mm scRNA scRNA -29 123 13 4 1696 225 49 0 0 chrX 145739914 145739955 -20910341 + L1_Mus2 LINE L1 6526 6566 0 4 1696 31 0 0 0 chrX 145739955 145739986 -20910310 + AT_rich Low_complexity Low_complexity 1 31 0 4 1696 608 300 185 10 chrX 145740209 145740500 -20909796 + MTE2a LTR MaLR 1 342 -37 4 1696 341 0 45 0 chrX 145740500 145740544 -20909752 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 4 1696 916 147 0 0 chrX 145740544 145740680 -20909616 - B1_Mus2 SINE Alu -11 136 1 4 1696 340 229 34 68 chrX 145740577 145740694 -20909602 - RLTR25B LTR ERVK -526 502 390 4 1696 198 103 0 0 chrX 145740694 145740723 -20909573 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1696 1244 75 6 0 chrX 145741199 145741372 -20908924 + (TTTC)n Simple_repeat Simple_repeat 4 177 0 4 1696 3675 81 10 4 chrX 145741382 145741890 -20908406 - L1_Mus1 LINE L1 -2 6565 6055 4 1696 570 226 0 0 chrX 145741890 145741996 -20908300 - ID_B1 SINE B4 -18 206 101 4 1696 215 306 0 53 chrX 145741978 145742054 -20908242 - ID2 SINE ID -10 73 2 4 1696 34 24 0 0 chrX 145742396 145742437 -20907859 + AT_rich Low_complexity Low_complexity 1 41 0 4 1696 244 300 25 12 chrX 145742561 145742642 -20907654 + MER20 DNA MER1_type 121 202 -17 4 1696 875 117 51 127 chrX 145743024 145743242 -20907054 - B2_Mm2 SINE B2 -7 188 1 4 1696 295 288 39 85 chrX 145743292 145743421 -20906875 - RSINE1 SINE B4 -31 134 12 4 1696 484 277 41 28 chrX 145743416 145743561 -20906735 - ID_B1 SINE B4 -77 147 1 4 1696 277 314 161 0 chrX 145744815 145744933 -20905363 + MER5A DNA MER1_type 8 144 -45 4 1696 382 298 1 72 chrX 145745082 145745214 -20905082 - B3A SINE B2 -5 193 70 4 1696 307 303 109 36 chrX 145745244 145745381 -20904915 - B1F2 SINE Alu -1 148 2 4 1696 534 126 53 0 chrX 145745449 145745544 -20904752 - L1_Mur2 LINE L1 -2000 3877 3778 4 1696 235 286 24 94 chrX 145745552 145745637 -20904659 - ID4 SINE ID -2 81 3 4 1696 279 288 14 0 chrX 145745781 145745854 -20904442 + ID4_ SINE ID 7 80 -3 4 1696 424 282 81 0 chrX 145745929 145746053 -20904243 + ID_B1 SINE B4 81 214 -10 4 1696 303 268 26 18 chrX 145746092 145746206 -20904090 + PB1D10 SINE Alu 2 116 -1 4 1696 405 39 0 0 chrX 145746218 145746269 -20904027 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1696 250 217 33 16 chrX 145746675 145746736 -20903560 + BC1_Mm scRNA scRNA 22 83 -69 4 1696 323 23 23 0 chrX 145747256 145747300 -20902996 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 4 1696 306 243 61 61 chrX 145747367 145747481 -20902815 - B4A SINE B4 -173 119 6 4 1696 233 67 0 0 chrX 145747864 145747894 -20902402 - L1_Mus1 LINE L1 -680 5887 5858 4 1696 868 123 19 0 chrX 145747892 145748054 -20902242 + L1_Mm LINE L1 5254 5418 -465 4 1696 2113 147 26 98 chrX 145748057 145748192 -20902104 - L1_Mur1 LINE L1 -2340 3546 3423 4 1696 1575 133 49 18 chrX 145748192 145748476 -20901820 - Lx LINE L1 -4 6650 6358 4 1696 2113 147 26 98 chrX 145748476 145748883 -20901413 - L1_Mur1 LINE L1 -2464 3422 3043 4 1696 186 0 47 93 chrX 145748896 145748939 -20901357 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 4 1696 4529 69 2 17 chrX 145748953 145749554 -20900742 - L1Md_F2 LINE L1 -2 6580 5989 4 1696 241 347 60 20 chrX 145749721 145749821 -20900475 - B1F SINE Alu -29 120 17 4 1696 224 268 126 35 chrX 145749869 145750002 -20900294 - B1_Mm SINE Alu -2 146 3 4 1696 216 224 16 65 chrX 145750090 145750152 -20900144 + B4 SINE B4 15 73 -219 4 1696 1884 80 15 4 chrX 145750451 145750716 -20899580 - RLTR1C LTR ERV1 0 503 236 4 1696 705 10 105 48 chrX 145750715 145750820 -20899476 - RLTR1C LTR ERV1 -392 111 1 4 26 13572 91 46 22 chrX 145750820 145752968 -20897328 - MMVL30-int LTR ERV1 0 3698 1501 4 1697 387 0 0 0 chrX 145753113 145753156 -20897140 + (TC)n Simple_repeat Simple_repeat 2 44 0 4 1697 513 0 0 0 chrX 145753156 145753212 -20897084 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 1697 467 154 54 141 chrX 145753316 145753601 -20896695 - MMVL30-int LTR ERV1 -2190 1508 960 4 1697 4391 133 11 4 chrX 145753666 145754399 -20895897 - MMVL30-int LTR ERV1 -2245 1453 716 4 1697 219 173 38 19 chrX 145754730 145754783 -20895513 + (CAAA)n Simple_repeat Simple_repeat 4 57 0 4 1697 2562 178 9 35 chrX 145754826 145755373 -20894923 - MMVL30-int LTR ERV1 -7023 533 1 4 1697 3829 82 4 0 chrX 145755373 145755874 -20894422 - RLTR1C LTR ERV1 0 503 1 4 1697 275 256 23 11 chrX 145755965 145756052 -20894244 + B3 SINE B2 125 212 -4 4 1697 23 0 0 0 chrX 145756286 145756309 -20893987 + AT_rich Low_complexity Low_complexity 1 23 0 4 1697 265 156 15 15 chrX 145756553 145756618 -20893678 + T-rich Low_complexity Low_complexity 4 68 0 4 1697 215 370 80 0 chrX 145757809 145757909 -20892387 + PB1D7 SINE Alu 3 110 -10 4 1697 1359 169 30 0 chrX 145758067 145758334 -20891962 + Lx2A1 LINE L1 6733 7007 -1 5 1697 354 272 60 17 chrX 145758396 145758512 -20891784 + ID_B1 SINE B4 9 129 -95 5 1697 1523 236 48 48 chrX 145758512 145758952 -20891344 + Lx LINE L1 6143 6582 -72 5 1697 214 358 26 93 chrX 145758973 145759124 -20891172 + B4A SINE B4 1 141 -151 5 1697 492 48 0 0 chrX 145759250 145759313 -20890983 + (TC)n Simple_repeat Simple_repeat 1 63 0 5 1697 252 0 0 0 chrX 145759313 145759340 -20890956 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1697 191 36 0 35 chrX 145759502 145759531 -20890765 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 5 1697 293 288 0 0 chrX 145759572 145759638 -20890658 - ID2 SINE ID -17 66 1 5 1697 484 304 120 5 chrX 145759670 145759862 -20890434 - ID_B1 SINE B4 -9 215 2 5 1697 662 328 12 6 chrX 145760993 145761165 -20889131 + ID_B1 SINE B4 6 178 -46 5 1697 1272 93 22 11 chrX 145763204 145763388 -20886908 - B2_Mm2 SINE B2 -9 186 1 5 1697 360 149 15 0 chrX 145763436 145763503 -20886793 - U3 snRNA snRNA -149 68 1 5 1697 233 254 0 0 chrX 145763799 145763854 -20886442 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1697 532 336 24 8 chrX 145763947 145764193 -20886103 - Lx9 LINE L1 -1067 6577 6328 5 1697 8087 110 5 1 chrX 145764213 145766225 -20884071 + L1_Mus1 LINE L1 4547 6564 -3 5 1697 381 134 15 0 chrX 145767601 145767668 -20882628 - U3 snRNA snRNA -149 68 1 5 1697 263 273 0 0 chrX 145767971 145768048 -20882248 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 1697 604 306 16 5 chrX 145768129 145768323 -20881973 - Lx9 LINE L1 -1067 6577 6382 5 1697 10879 150 28 28 chrX 145768416 145769749 -20880547 - Lx LINE L1 -1 6653 5345 5 1697 549 0 0 0 chrX 145769749 145769810 -20880486 + (TTTC)n Simple_repeat Simple_repeat 4 64 0 5 1697 14544 117 17 39 chrX 145769810 145772717 -20877579 - Lx LINE L1 -542 5344 2612 5 1697 9407 80 3 36 chrX 145772713 145773494 -20876802 - L1_Mus1 LINE L1 -118 6449 5676 5 1697 2898 97 8 0 chrX 145773494 145773895 -20876401 + L1_Mus1 LINE L1 6162 6565 -2 5 1697 9407 124 6 20 chrX 145773895 145775262 -20875034 - L1_Mus1 LINE L1 -208 5675 4326 5 1697 2842 164 28 55 chrX 145775250 145775929 -20874367 - L1_Mur1 LINE L1 -2823 3063 2403 5 1697 1052 167 23 11 chrX 145775931 145776247 -20874049 - L1_Mur1 LINE L1 -4500 1386 1068 5 1697 1562 209 87 143 chrX 145776247 145776765 -20873531 + RMER19B LTR ERVK 1 489 -413 5 1697 305 287 83 118 chrX 145777276 145777505 -20872791 - MLT2B5 LTR ERVL -261 340 120 5 1697 523 293 47 42 chrX 145777382 145777574 -20872722 - MTEa LTR MaLR -165 214 22 5 1697 361 265 98 0 chrX 145777762 145777864 -20872432 + MER5A1 DNA MER1_type 53 164 -2 5 1697 228 366 24 0 chrX 145778632 145778714 -20871582 + MLT1H1 LTR MaLR 345 428 -127 5 1697 4473 155 29 2 chrX 145778911 145779832 -20870464 - Lx5 LINE L1 -1062 5988 5024 5 1697 333 100 0 0 chrX 145779833 145779883 -20870413 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1697 4089 214 58 6 chrX 145779887 145780745 -20869551 + Lx5 LINE L1 6148 7050 0 5 1697 312 304 118 0 chrX 145780917 145781019 -20869277 + PB1 SINE Alu 14 127 0 5 1697 1739 145 14 3 chrX 145781186 145781483 -20868813 - L1_Mus3 LINE L1 -1 6637 6338 5 1697 1345 177 4 0 chrX 145781486 145781718 -20868578 + L1_Mm LINE L1 5411 5643 -240 5 1697 333 242 158 0 chrX 145781720 145781840 -20868456 + B3 SINE B2 53 191 -25 5 1697 584 147 7 0 chrX 145783061 145783197 -20867099 + (TG)n Simple_repeat Simple_repeat 1 137 0 5 1697 319 289 0 66 chrX 145783380 145783502 -20866794 + PB1D9 SINE Alu 5 118 -2 5 1697 315 322 40 33 chrX 145784308 145784459 -20865837 - B4 SINE B4 -18 274 123 5 1697 418 343 0 0 chrX 145784557 145784691 -20865605 - RSINE1 SINE B4 -29 136 3 5 1697 218 246 18 0 chrX 145785025 145785082 -20865214 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 5 1697 261 301 67 19 chrX 145785278 145785383 -20864913 - ID_B1 SINE B4 -7 217 108 5 1697 464 270 113 30 chrX 145785889 145786057 -20864239 + B3 SINE B2 24 205 -11 5 1697 2402 132 136 36 chrX 145787123 145787595 -20862701 + MURVY-LTR LTR ERV1 1 519 0 5 1697 6177 303 43 40 chrX 145787595 145790971 -20859325 + MuRRS4-int LTR ERV1 3 3494 -4062 5 1697 2627 10 0 0 chrX 145790971 145791261 -20859035 - L1Md_A LINE L1 0 6582 6293 5 1697 2597 10 17 10 chrX 145791261 145791560 -20858736 + L1Md_A LINE L1 6004 6304 -278 5 1697 6804 287 18 18 chrX 145791560 145793591 -20856705 + MuRRS4-int LTR ERV1 2243 4272 -791 5 1697 2757 123 90 33 chrX 145793882 145794371 -20855925 + MURVY-LTR LTR ERV1 1 517 -2 5 1697 710 162 6 0 chrX 145794541 145794720 -20855576 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 1697 335 278 8 25 chrX 145794912 145795030 -20855266 + PB1D9 SINE Alu 5 120 0 5 1697 403 317 14 27 chrX 145795795 145795941 -20854355 - RSINE1 SINE B4 -19 146 3 5 1697 5386 90 5 8 chrX 145796526 145797276 -20853020 + L1Md_F2 LINE L1 5835 6582 0 5 1697 212 167 0 0 chrX 145797509 145797545 -20852751 + B4 SINE B4 38 73 -219 5 1697 325 25 0 0 chrX 145797849 145797889 -20852407 - RLTR1C LTR ERV1 0 503 464 5 1697 306 320 31 0 chrX 145797882 145797979 -20852317 + B1F SINE Alu 29 128 -21 5 1697 237 182 54 18 chrX 145797990 145798046 -20852250 + Lx6 LINE L1 6524 6581 -879 5 1697 578 278 140 43 chrX 145798047 145798254 -20852042 + Lx5 LINE L1 6480 6706 -344 5 1697 5254 107 12 8 chrX 145798528 145799284 -20851012 - L1_Mus1 LINE L1 -2 6565 5807 5 1697 3025 122 2 9 chrX 145799546 145800096 -20850200 - L1_Mus3 LINE L1 -684 5954 5407 5 1697 1974 117 7 10 chrX 145800096 145800398 -20849898 + L1_Mus3 LINE L1 6338 6638 0 5 1697 3025 165 0 10 chrX 145800398 145800431 -20849865 - L1_Mus3 LINE L1 -477 5406 5375 5 1697 272 294 36 13 chrX 145800560 145800670 -20849626 - B1F SINE Alu -2 115 7 5 1697 3225 212 58 14 chrX 145800835 145801542 -20848754 - Lx4B LINE L1 0 7058 6321 5 1697 269 338 75 23 chrX 145801561 145801694 -20848602 - MLT1L LTR MaLR -160 450 311 5 1697 359 258 107 8 chrX 145802034 145802155 -20848141 - ID_B1 SINE B4 -91 133 1 5 1697 747 311 12 4 chrX 145802199 145802454 -20847842 - Lx7 LINE L1 -396 7300 7044 5 1697 236 296 28 75 chrX 145803240 145803346 -20846950 + MER5A DNA MER1_type 80 180 -9 5 1697 1094 90 7 0 chrX 145803409 145803553 -20846743 + B1_Mm SINE Alu 3 147 0 5 1697 499 260 32 0 chrX 145803677 145803800 -20846496 + B1F1 SINE Alu 6 132 -17 5 1697 333 0 0 0 chrX 145803809 145803846 -20846450 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 5 1697 640 231 7 7 chrX 145804206 145804350 -20845946 + B1_Mur3 SINE Alu 6 149 0 5 1697 23 54 0 0 chrX 145804350 145804387 -20845909 + AT_rich Low_complexity Low_complexity 1 37 0 5 1697 227 404 9 18 chrX 145804433 145804544 -20845752 + PB1D10 SINE Alu 6 115 -2 5 1697 327 349 0 0 chrX 145804570 145804702 -20845594 + L1MC2 LINE L1 6100 6231 -113 5 1697 489 90 90 0 chrX 145804823 145804901 -20845395 - RMER19A LTR ERVK 0 737 653 5 1697 188 125 0 59 chrX 145804944 145804995 -20845301 + (TTAA)n Simple_repeat Simple_repeat 2 49 0 5 1697 2936 41 3 0 chrX 145805059 145805404 -20844892 + ORR1A0 LTR MaLR 1 346 0 5 1697 333 316 31 0 chrX 145805498 145805596 -20844700 + B4A SINE B4 1 101 -191 5 1697 494 275 135 20 chrX 145805665 145805917 -20844379 + L1MB8 LINE L1 5742 6022 -156 5 1697 3152 49 13 0 chrX 145806027 145806416 -20843880 - MTA_Mm LTR MaLR 0 396 3 5 1697 519 295 0 0 chrX 145806420 145806559 -20843737 + ID_B1 SINE B4 86 224 0 5 1697 578 270 208 22 chrX 145806925 145807194 -20843102 + Lx8 LINE L1 7121 7439 -34 5 1697 1727 199 25 11 chrX 145807440 145807800 -20842496 - ORR1B2 LTR MaLR -2 365 1 5 1697 423 132 0 0 chrX 145807942 145808033 -20842263 + (A)n Simple_repeat Simple_repeat 1 91 0 5 1697 3686 187 62 88 chrX 145808039 145808965 -20841331 + RMER19B LTR ERVK 1 902 0 5 1697 451 233 8 33 chrX 145810368 145810488 -20839808 - ID_B1 SINE B4 -4 220 104 5 1697 851 289 0 34 chrX 145811087 145811323 -20838973 + MTEa LTR MaLR 24 251 -128 5 1697 602 145 7 101 chrX 145811385 145811523 -20838773 - URR1B DNA MER1_type -100 125 1 5 1697 662 166 92 6 chrX 145811995 145812159 -20838137 + Lx9 LINE L1 7465 7642 -2 5 1697 788 250 50 10 chrX 145812400 145812602 -20837694 + B3 SINE B2 1 210 -6 5 1697 308 309 80 14 chrX 145812638 145812776 -20837520 + ID_B1 SINE B4 70 216 -8 5 1697 603 81 0 0 chrX 145812790 145812876 -20837420 + (GA)n Simple_repeat Simple_repeat 1 86 0 5 1697 321 47 0 0 chrX 145812987 145813030 -20837266 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1697 265 300 0 59 chrX 145813626 145813711 -20836585 + ID4_ SINE ID 2 81 -2 5 1697 782 188 7 0 chrX 145813761 145813899 -20836397 + B1_Mur4 SINE Alu 5 143 -7 5 1697 522 0 0 0 chrX 145813903 145813961 -20836335 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 1697 430 261 143 7 chrX 145814010 145814164 -20836132 - ID_B1 SINE B4 -47 177 3 5 1697 301 319 143 26 chrX 145814404 145814948 -20835348 + Charlie2a DNA MER1_type 1893 2500 -361 5 1697 4677 99 11 0 chrX 145816829 145817497 -20832799 + L1_Mus3 LINE L1 5959 6633 -5 5 1697 32727 80 4 3 chrX 145817505 145822731 -20827565 + L1Md_F2 LINE L1 266 5589 -297 5 1697 7895 60 3 2 chrX 145822731 145823723 -20826573 + L1Md_F2 LINE L1 5590 6582 -3 5 1697 2937 122 20 30 chrX 145823997 145824339 -20825957 + RMER17D LTR ERVK 1 343 -546 5 1697 1301 67 0 11 chrX 145824339 145824521 -20825775 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 5 1697 2937 122 20 30 chrX 145824521 145824736 -20825560 + RMER17D LTR ERVK 344 552 -337 5 1697 2789 73 0 3 chrX 145825119 145825478 -20824818 - L1_Mus1 LINE L1 0 6567 6210 5 1697 1953 138 9 6 chrX 145825479 145825821 -20824475 + RMER17D LTR ERVK 547 889 0 5 1697 450 139 12 0 chrX 145825821 145825907 -20824389 - Lx LINE L1 -12 6642 6556 5 1697 429 156 0 0 chrX 145826290 145826367 -20823929 + (CCCA)n Simple_repeat Simple_repeat 3 79 0 6 1697 195 371 50 6 chrX 145826367 145826527 -20823769 - L2a LINE L2 0 3426 3260 6 1697 552 276 149 14 chrX 145829287 145829613 -20820683 - L1MC1 LINE L1 -13 6320 5937 6 1697 254 284 0 0 chrX 145831114 145831188 -20819108 + PB1D10 SINE Alu 42 115 -2 6 1697 5868 109 19 5 chrX 145831330 145832961 -20817335 - L1VL2 LINE L1 -1789 1826 172 6 1697 259 284 24 87 chrX 145832958 145833085 -20817211 - L1MC1 LINE L1 -390 5954 5836 6 1697 256 333 0 0 chrX 145833147 145833228 -20817068 - ID4_ SINE ID 0 83 3 6 1697 229 125 41 20 chrX 145833413 145833462 -20816834 + A-rich Low_complexity Low_complexity 2 51 0 6 1697 371 256 23 62 chrX 145833541 145833670 -20816626 - L1MCa LINE L1 -5875 633 510 6 1697 293 262 0 35 chrX 145833854 145833941 -20816355 - PB1 SINE Alu -3 124 41 6 1697 582 295 87 19 chrX 145834037 145834303 -20815993 - L1MCa LINE L1 -6220 288 5 6 1697 386 258 89 22 chrX 145834528 145834663 -20815633 - B1F2 SINE Alu 0 149 6 6 1697 312 263 40 0 chrX 145834803 145834902 -20815394 + MER53 DNA hAT 91 193 0 6 1697 711 35 0 0 chrX 145835089 145835175 -20815121 + (TCCC)n Simple_repeat Simple_repeat 3 88 0 6 1697 359 89 0 18 chrX 145835220 145835277 -20815019 + (TCCC)n Simple_repeat Simple_repeat 4 59 0 6 1697 300 320 15 46 chrX 145835374 145835505 -20814791 + LTR16A1 LTR ERVL 55 181 -275 6 1697 220 175 35 17 chrX 145835516 145835574 -20814722 + CT-rich Low_complexity Low_complexity 2 60 0 6 1697 1042 236 79 76 chrX 145835776 145835823 -20814473 + ORR1D1 LTR MaLR 1 38 -336 6 1697 1132 66 0 0 chrX 145835823 145835960 -20814336 + B1_Mus1 SINE Alu 3 139 -9 6 1697 196 53 26 26 chrX 145835960 145835999 -20814297 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1697 1042 236 79 76 chrX 145835999 145836197 -20814099 + ORR1D1 LTR MaLR 39 230 -144 6 1697 186 71 0 0 chrX 145836197 145836225 -20814071 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 6 1697 1042 236 79 76 chrX 145836225 145836344 -20813952 + ORR1D1 LTR MaLR 231 366 -8 6 1697 1799 141 0 45 chrX 145836590 145836903 -20813393 + Lx3B LINE L1 6672 6970 -3 6 1697 310 282 0 0 chrX 145837189 145837260 -20813036 + B1F SINE Alu 21 91 -58 6 1697 601 199 21 35 chrX 145837386 145837527 -20812769 + B1_Mur3 SINE Alu 5 143 -6 6 1697 402 298 20 66 chrX 145837572 145837723 -20812573 + RSINE1 SINE B4 5 148 -17 6 1697 465 19 0 0 chrX 145837733 145837787 -20812509 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 6 1697 1682 246 70 16 chrX 145837812 145838241 -20812055 - Lx6 LINE L1 -179 7281 6830 6 1697 712 291 39 0 chrX 145838557 145838760 -20811536 - ID_B1 SINE B4 -12 212 2 6 1697 2364 144 17 7 chrX 145838809 145839216 -20811080 + Lx2A LINE L1 6589 6999 -9 6 1697 252 86 0 0 chrX 145839216 145839251 -20811045 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1697 229 333 0 0 chrX 145839282 145839342 -20810954 + B3A SINE B2 48 107 -91 6 1697 362 281 26 58 chrX 145839381 145839536 -20810760 + B3A SINE B2 60 209 -7 6 1697 193 119 0 45 chrX 145840519 145840563 -20809733 + A-rich Low_complexity Low_complexity 3 44 0 6 1697 246 303 36 28 chrX 145840911 145841012 -20809284 + B1F1 SINE Alu 19 118 -2 6 1697 394 252 210 8 chrX 145841016 145841140 -20809156 + B3 SINE B2 3 151 -65 6 1697 6243 25 0 0 chrX 145841281 145841994 -20808302 - L1_Mm LINE L1 -195 5688 4976 6 1697 1197 28 0 0 chrX 145841995 145842140 -20808156 + L1Md_A LINE L1 6436 6580 -2 6 1697 633 142 0 0 chrX 145842326 145842439 -20807857 + (TCTA)n Simple_repeat Simple_repeat 1 113 0 6 1697 762 258 19 15 chrX 145842453 145842658 -20807638 - ID_B1 SINE B4 -17 207 2 6 1697 276 332 56 79 chrX 145843030 145843246 -20807050 - ORR1E LTR MaLR -148 211 1 6 1697 509 326 0 7 chrX 145843377 145843525 -20806771 + B1F1 SINE Alu 1 147 -2 6 1697 318 305 18 37 chrX 145843663 145843772 -20806524 + B3A SINE B2 1 107 -91 6 1697 21 36 0 0 chrX 145843795 145843823 -20806473 + AT_rich Low_complexity Low_complexity 1 28 0 6 1697 582 354 18 4 chrX 145843859 145844086 -20806210 + B4A SINE B4 2 231 -61 6 1697 500 308 13 19 chrX 145844087 145844246 -20806050 + RSINE1 SINE B4 6 163 -2 6 1697 237 190 0 79 chrX 145844286 145844349 -20805947 + B4A SINE B4 235 292 0 6 1697 298 238 12 70 chrX 145844542 145844628 -20805668 - ID4 SINE ID 0 83 3 6 1697 247 295 95 35 chrX 145844643 145844759 -20805537 + MER58B DNA MER1_type 172 294 -47 6 1697 344 344 24 8 chrX 145845066 145845189 -20805107 - B4A SINE B4 -166 126 2 6 1697 274 286 0 16 chrX 145845736 145845832 -20804464 + ID4 SINE ID 9 102 -50 6 1697 387 202 7 118 chrX 145845988 145846123 -20804173 + MT2B LTR ERVL 145 264 -337 6 1697 721 157 0 8 chrX 145846018 145846146 -20804150 + B1_Mus2 SINE Alu 9 135 -12 6 1697 1059 102 0 0 chrX 145846146 145846323 -20803973 + (GA)n Simple_repeat Simple_repeat 2 178 0 6 1697 206 292 0 15 chrX 145846328 145846394 -20803902 + GA-rich Low_complexity Low_complexity 5 69 0 6 1697 2791 151 32 24 chrX 145847749 145848286 -20802010 + RLTR13D1 LTR ERVK 3 543 -359 6 1697 3315 113 28 7 chrX 145848259 145848826 -20801470 + RLTR13D1 LTR ERVK 227 803 0 6 1697 464 329 28 5 chrX 145849358 145849575 -20800721 - MLT1E2 LTR MaLR -30 597 376 6 1697 540 0 0 0 chrX 145849816 145849876 -20800420 + (TTTTG)n Simple_repeat Simple_repeat 1 60 0 6 1697 773 178 0 0 chrX 145849876 145850005 -20800291 - B1_Mus1 SINE Alu -13 135 7 6 1697 477 0 0 0 chrX 145850024 145850077 -20800219 + (GGAA)n Simple_repeat Simple_repeat 2 54 0 6 1697 210 263 18 0 chrX 145850113 145850170 -20800126 + ID4_ SINE ID 24 81 -2 6 1697 247 245 0 0 chrX 145850171 145850220 -20800076 + GA-rich Low_complexity Low_complexity 4 52 0 6 1697 723 302 19 0 chrX 145850522 145850727 -20799569 + ID_B1 SINE B4 3 211 -13 6 1697 226 82 19 58 chrX 145851549 145851601 -20798695 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 6 1697 328 287 70 0 chrX 145851601 145851716 -20798580 - ID_B1 SINE B4 0 224 102 6 1697 196 120 0 39 chrX 145852681 145852733 -20797563 + (TCTCTG)n Simple_repeat Simple_repeat 5 54 0 6 1697 204 182 0 0 chrX 145852743 145852787 -20797509 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 6 1697 269 304 0 0 chrX 145852844 145852913 -20797383 - B3A SINE B2 -80 118 50 6 1697 238 268 26 90 chrX 145853609 145853687 -20796609 + RSINE1 SINE B4 92 164 -1 6 1697 582 71 0 0 chrX 145853742 145853826 -20796470 - BC1_Mm scRNA scRNA -56 96 13 6 1697 259 31 4 45 chrX 145853826 145853880 -20796416 + L1_Mus2 LINE L1 6526 6581 -1 6 1697 562 293 191 17 chrX 145854120 145854413 -20795883 + MTE2a LTR MaLR 1 344 -35 6 1697 188 0 74 0 chrX 145854413 145854440 -20795856 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6 1697 1013 137 0 0 chrX 145854451 145854597 -20795699 - B1_Mus2 SINE Alu -1 146 1 6 1697 266 276 0 0 chrX 145854913 145854971 -20795325 - PB1D10 SINE Alu -37 80 23 6 1697 363 44 0 0 chrX 145854979 145855024 -20795272 + (CCCTG)n Simple_repeat Simple_repeat 2 46 0 6 1697 513 92 0 0 chrX 145855192 145855268 -20795028 + (TC)n Simple_repeat Simple_repeat 2 77 0 6 1697 282 282 93 8 chrX 145855270 145855283 -20795013 - B1F SINE Alu 0 149 132 6 1697 3943 71 2 2 chrX 145855283 145855794 -20794502 - L1_Mus1 LINE L1 -2 6565 6055 6 1697 282 282 93 8 chrX 145855794 145855898 -20794398 - B1F SINE Alu -18 131 22 6 1697 481 277 0 8 chrX 145855898 145855914 -20794382 - ID_B1 SINE B4 -18 206 88 6 1697 237 245 0 0 chrX 145855908 145855957 -20794339 - ID SINE ID -174 50 2 6 1697 2019 62 88 0 chrX 145856156 145856430 -20793866 - L1Md_F2 LINE L1 -526 6056 5759 6 1697 2868 110 87 46 chrX 145857192 145857689 -20792607 + MURVY-LTR LTR ERV1 1 517 -2 6 1697 358 286 50 72 chrX 145857691 145857983 -20792313 + RLTR6-int LTR ERV1 3 268 -7510 6 1697 4356 283 24 36 chrX 145858030 145859787 -20790509 + RLTR6-int LTR ERV1 343 2336 -5442 6 1697 6803 300 44 24 chrX 145859922 145861736 -20788560 + RLTR6-int LTR ERV1 2714 4574 -3204 6 1697 891 136 0 0 chrX 145861736 145861883 -20788413 + (GAAA)n Simple_repeat Simple_repeat 2 148 0 6 1697 6803 300 44 24 chrX 145861883 145862946 -20787350 + RLTR6-int LTR ERV1 4575 5648 -2130 6 1697 2440 137 126 34 chrX 145863218 145863693 -20786603 + MURVY-LTR LTR ERV1 1 519 0 6 1697 341 184 9 0 chrX 145863857 145863971 -20786325 + (TG)n Simple_repeat Simple_repeat 1 115 0 6 1697 296 256 16 71 chrX 145864148 145864274 -20786022 + PB1D9 SINE Alu 2 120 0 6 1697 2173 107 239 26 chrX 145864774 145865226 -20785070 + RLTR6_Mm LTR ERV1 37 584 -70 6 1697 306 319 30 48 chrX 145865639 145865807 -20784489 - B4 SINE B4 -18 274 110 6 1697 234 362 20 34 chrX 145865880 145866026 -20784270 - RSINE1 SINE B4 -19 146 3 6 1697 240 167 0 0 chrX 145866131 145866179 -20784117 + A-rich Low_complexity Low_complexity 1 48 0 6 1697 251 111 0 0 chrX 145866884 145866920 -20783376 + B4 SINE B4 38 73 -219 6 1697 3388 117 18 4 chrX 145867227 145867723 -20782573 - RLTR1C LTR ERV1 0 503 1 6 1697 426 251 159 0 chrX 145867756 145867919 -20782377 + B3 SINE B2 24 212 -4 6 1697 497 100 11 0 chrX 145869113 145869203 -20781093 + (TG)n Simple_repeat Simple_repeat 1 91 0 6 1697 291 302 0 25 chrX 145869441 145869563 -20780733 + PB1D9 SINE Alu 2 120 0 6 1697 258 331 30 48 chrX 145870380 145870548 -20779748 - B4 SINE B4 -18 274 110 6 1697 354 345 14 27 chrX 145870620 145870766 -20779530 - RSINE1 SINE B4 -19 146 3 6 1697 224 167 0 0 chrX 145871599 145871635 -20778661 + B4 SINE B4 38 73 -219 6 1697 3719 91 0 16 chrX 145871939 145872450 -20777846 - RLTR1C LTR ERV1 0 503 1 6 1697 323 318 109 29 chrX 145872483 145872658 -20777638 + B3 SINE B2 24 212 -4 6 1697 431 190 7 0 chrX 145873872 145874009 -20776287 + (TG)n Simple_repeat Simple_repeat 1 138 0 6 1697 304 299 17 25 chrX 145874199 145874319 -20775977 + PB1D9 SINE Alu 2 120 0 6 1697 21 0 0 0 chrX 145874457 145874478 -20775818 + AT_rich Low_complexity Low_complexity 1 21 0 6 1697 282 298 24 47 chrX 145875154 145875281 -20775015 - B4 SINE B4 -46 246 123 7 1697 246 311 67 19 chrX 145876133 145876238 -20774058 - ID_B1 SINE B4 -7 217 108 7 1697 233 184 20 0 chrX 145876363 145876412 -20773884 + B4 SINE B4 24 73 -219 7 1697 460 242 123 32 chrX 145876735 145876889 -20773407 + B3 SINE B2 24 191 -25 7 1697 427 142 19 0 chrX 145878131 145878237 -20772059 + (TG)n Simple_repeat Simple_repeat 2 109 0 7 1697 311 274 8 64 chrX 145878465 145878590 -20771706 + PB1D9 SINE Alu 2 119 -1 7 1697 222 326 0 0 chrX 145879287 145879376 -20770920 + (TG)n Simple_repeat Simple_repeat 2 90 0 7 1697 267 298 24 47 chrX 145879433 145879560 -20770736 - B4 SINE B4 -46 246 123 7 1697 283 403 0 14 chrX 145879646 145879792 -20770504 - RSINE1 SINE B4 -19 146 3 7 1697 3776 92 0 2 chrX 145880965 145881469 -20768827 - RLTR1C LTR ERV1 0 503 1 7 1697 283 263 198 2 chrX 145881628 145881772 -20768524 + B3 SINE B2 22 191 -7 7 1697 284 165 11 0 chrX 145882994 145883085 -20767211 + (TG)n Simple_repeat Simple_repeat 1 92 0 7 1698 318 294 0 56 chrX 145883313 145883439 -20766857 + PB1D9 SINE Alu 2 120 0 7 1698 227 357 51 34 chrX 145884224 145884401 -20765895 - B4 SINE B4 -3 289 110 7 1698 298 392 6 19 chrX 145884464 145884620 -20765676 - RSINE1 SINE B4 -9 156 3 7 1698 229 159 23 0 chrX 145885474 145885518 -20764778 + B4 SINE B4 29 73 -219 7 1698 3628 104 4 6 chrX 145885822 145886325 -20763971 - RLTR1C LTR ERV1 0 503 2 7 1698 454 235 123 32 chrX 145886359 145886513 -20763783 + B3 SINE B2 24 191 -25 7 1698 451 181 6 6 chrX 145887727 145887883 -20762413 + (TG)n Simple_repeat Simple_repeat 1 156 0 7 1698 334 280 8 25 chrX 145888061 145888182 -20762114 + PB1D9 SINE Alu 2 120 0 7 1698 29 47 0 0 chrX 145888318 145888361 -20761935 + AT_rich Low_complexity Low_complexity 1 43 0 7 1698 214 312 31 0 chrX 145888443 145888507 -20761789 - ID4_ SINE ID -13 70 5 7 1698 348 341 22 38 chrX 145888980 145889163 -20761133 - B4 SINE B4 -3 289 110 7 1698 417 302 35 41 chrX 145889236 145889381 -20760915 - RSINE1 SINE B4 -19 146 3 7 1698 593 118 8 0 chrX 145890549 145890668 -20759628 + (TG)n Simple_repeat Simple_repeat 1 120 0 7 1698 253 336 0 27 chrX 145890894 145891004 -20759292 + PB1D9 SINE Alu 2 108 -12 7 1698 243 0 0 0 chrX 145891007 145891034 -20759262 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1698 205 182 0 0 chrX 145891451 145891495 -20758801 + T-rich Low_complexity Low_complexity 1 44 0 7 1698 180 0 0 0 chrX 145891495 145891515 -20758781 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 1698 288 282 128 60 chrX 145892708 145892825 -20757471 + PB1D7 SINE Alu 3 127 0 7 1698 1012 185 28 20 chrX 145892973 145893227 -20757069 + Lx2B LINE L1 6739 6994 -6 7 1698 287 274 0 27 chrX 145893299 145893374 -20756922 + tRNA-Ala-GCY_ tRNA tRNA 3 75 0 7 1698 373 229 3 21 chrX 145893374 145893385 -20756911 + ID SINE ID 9 88 -204 7 1698 1991 215 45 41 chrX 145893406 145893919 -20756377 + Lx LINE L1 6134 6648 -6 7 1698 2242 175 12 31 chrX 145893902 145894089 -20756207 + L1_Mm LINE L1 5275 5461 -422 7 1698 1121 140 64 18 chrX 145894089 145894307 -20755989 + L1_Mus3 LINE L1 6407 6634 -4 7 1698 2242 175 12 31 chrX 145894307 145894602 -20755694 + L1_Mm LINE L1 5462 5748 -135 7 1698 1805 151 23 3 chrX 145894595 145894940 -20755356 - L1_Mur2 LINE L1 -576 5301 4950 7 1698 217 279 0 29 chrX 145895303 145895373 -20754923 + (TATG)n Simple_repeat Simple_repeat 3 70 0 7 1698 539 309 7 137 chrX 145895423 145895481 -20754815 - B4 SINE B4 -26 266 217 7 1698 228 35 0 0 chrX 145895481 145895510 -20754786 + (TTG)n Simple_repeat Simple_repeat 2 30 0 7 1698 539 309 7 137 chrX 145895510 145895667 -20754629 - B4 SINE B4 -76 216 77 7 1698 302 313 105 33 chrX 145895667 145895819 -20754477 - RSINE1 SINE B4 0 165 3 7 1698 539 309 7 137 chrX 145895819 145895894 -20754402 - B4 SINE B4 -216 76 13 7 1698 21 57 0 0 chrX 145895981 145896016 -20754280 + AT_rich Low_complexity Low_complexity 1 35 0 7 1698 3615 253 34 28 chrX 145896338 145897617 -20752679 - Lx9 LINE L1 -18 7626 6184 7 1698 1107 114 0 0 chrX 145897617 145897792 -20752504 + (TA)n Simple_repeat Simple_repeat 2 176 0 7 1698 776 275 39 68 chrX 145897792 145898270 -20752026 - Lx9 LINE L1 -1290 6183 5715 7 1698 315 228 0 0 chrX 145898248 145898327 -20751969 - L1_Rod LINE L1 -1525 4322 4244 7 1698 522 273 146 4 chrX 145898576 145898815 -20751481 + Lx8 LINE L1 7196 7468 -5 7 1698 282 286 91 45 chrX 145898844 145898932 -20751364 + B3A SINE B2 25 116 -82 7 1698 486 0 0 0 chrX 145898983 145899037 -20751259 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1698 374 328 8 39 chrX 145900250 145900377 -20749919 - B1F SINE Alu -1 148 26 7 1698 595 306 61 1 chrX 145900720 145900893 -20749403 + B3A SINE B2 2 188 -28 7 1698 531 31 0 0 chrX 145900893 145900958 -20749338 + (CA)n Simple_repeat Simple_repeat 2 66 0 7 1698 591 312 82 10 chrX 145900958 145900978 -20749318 + B3 SINE B2 189 208 -8 7 1698 355 297 201 54 chrX 145901192 145901416 -20748880 + B4A SINE B4 7 263 -29 7 1698 591 15 0 0 chrX 145901455 145901523 -20748773 + (TC)n Simple_repeat Simple_repeat 2 69 0 7 1698 276 53 0 0 chrX 145901525 145901563 -20748733 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1698 207 135 37 37 chrX 145901727 145901781 -20748515 + T-rich Low_complexity Low_complexity 3 56 0 7 1698 395 342 125 0 chrX 145901918 145902070 -20748226 - ID_B1 SINE B4 -52 172 2 7 1698 216 289 0 0 chrX 145902617 145902669 -20747627 - ID4_ SINE ID -26 57 6 7 1698 661 318 57 5 chrX 145903226 145903419 -20746877 + ID_B1 SINE B4 6 208 -16 7 1698 204 225 0 0 chrX 145903733 145903773 -20746523 + GA-rich Low_complexity Low_complexity 3 42 0 7 1698 404 147 0 0 chrX 145904922 145904990 -20745306 - U3 snRNA snRNA -149 68 1 7 1698 288 260 0 0 chrX 145905293 145905370 -20744926 + (TG)n Simple_repeat Simple_repeat 2 78 0 7 1698 604 323 34 24 chrX 145905451 145905743 -20744553 - Lx9 LINE L1 -1067 6577 6283 7 1698 5930 134 27 18 chrX 145905743 145906913 -20743383 - Lx LINE L1 -1 6653 5476 7 1698 855 141 95 0 chrX 145906911 145907132 -20743164 - L1VL2 LINE L1 -444 3470 3219 7 1698 590 99 11 0 chrX 145907132 145907223 -20743073 + (TTCC)n Simple_repeat Simple_repeat 3 94 0 7 1698 6594 96 12 3 chrX 145907713 145908693 -20741603 - L1Md_F2 LINE L1 -1 6581 5593 7 1698 11778 84 19 1 chrX 145908692 145911244 -20739052 - L1Md_F LINE L1 -2898 2985 387 7 1698 6413 143 71 10 chrX 145911246 145913211 -20737085 - L1VL2 LINE L1 -1449 2465 372 7 1698 308 284 12 12 chrX 145913592 145913674 -20736622 + B3A SINE B2 1 82 -116 7 1698 219 360 48 62 chrX 145913674 145913737 -20736559 + ID_B1 SINE B4 1 143 -81 7 1698 204 237 143 13 chrX 145914209 145914286 -20736010 + MIR3 SINE MIR 85 171 -37 7 1698 184 356 14 0 chrX 145914996 145915069 -20735227 - MIRb SINE MIR -75 193 120 7 1698 473 341 29 0 chrX 145916325 145916530 -20733766 - MLT1E2 LTR MaLR -30 597 387 7 1698 818 204 0 14 chrX 145916793 145916937 -20733359 - B1_Mus1 SINE Alu 0 148 7 7 1698 426 85 0 0 chrX 145916955 145917014 -20733282 + (GGGA)n Simple_repeat Simple_repeat 2 60 0 7 1698 258 245 0 0 chrX 145917104 145917157 -20733139 + GA-rich Low_complexity Low_complexity 4 56 0 7 1698 719 316 29 0 chrX 145917444 145917650 -20732646 + ID_B1 SINE B4 3 214 -10 7 1698 264 317 48 38 chrX 145917756 145917861 -20732435 - PB1D10 SINE Alu -35 114 9 7 1698 253 324 27 0 chrX 145918045 145918119 -20732177 - ID4 SINE ID -4 79 4 7 1698 287 78 0 19 chrX 145918499 145918551 -20731745 + (TTTG)n Simple_repeat Simple_repeat 1 51 0 7 1698 224 77 26 0 chrX 145918547 145918586 -20731710 + (TTG)n Simple_repeat Simple_repeat 1 40 0 7 1698 373 248 67 50 chrX 145918586 145918671 -20731625 - ID_B1 SINE B4 -1 223 136 7 1698 3183 61 2 0 chrX 145918671 145919066 -20731230 + MTA_Mm LTR MaLR 1 396 0 7 1698 373 248 67 50 chrX 145919066 145919099 -20731197 - ID_B1 SINE B4 -89 135 103 7 1698 251 238 25 0 chrX 145919147 145919227 -20731069 - L1MB7 LINE L1 -56 6128 6047 7 1698 185 273 0 22 chrX 145919987 145920032 -20730264 - L3 LINE CR1 -2290 2199 2156 7 1698 337 257 18 18 chrX 145920059 145920170 -20730126 + (TCTG)n Simple_repeat Simple_repeat 2 112 0 7 1698 269 348 107 0 chrX 145920194 145920306 -20729990 - B3A SINE B2 -22 176 53 7 1698 372 43 0 0 chrX 145920717 145920763 -20729533 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1698 428 214 45 60 chrX 145921458 145921592 -20728704 - ID_B1 SINE B4 0 224 93 7 1698 441 0 0 0 chrX 145922338 145922387 -20727909 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 7 1698 537 80 0 0 chrX 145922505 145922580 -20727716 + (CA)n Simple_repeat Simple_repeat 2 76 0 7 1698 594 91 117 39 chrX 145922610 145922713 -20727583 - BC1_Mm scRNA scRNA -29 123 13 7 1698 225 49 0 0 chrX 145922713 145922754 -20727542 + L1_Mus2 LINE L1 6526 6566 0 7 1698 30 0 0 0 chrX 145922754 145922784 -20727512 + AT_rich Low_complexity Low_complexity 1 30 0 7 1698 606 300 185 10 chrX 145923007 145923298 -20726998 + MTE2a LTR MaLR 1 342 -37 7 1698 341 0 45 0 chrX 145923298 145923342 -20726954 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 7 1698 916 147 0 0 chrX 145923342 145923478 -20726818 - B1_Mus2 SINE Alu -11 136 1 7 1698 340 229 34 68 chrX 145923375 145923492 -20726804 - RLTR25B LTR ERVK -526 502 390 7 1698 189 107 0 0 chrX 145923492 145923520 -20726776 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1698 1148 59 7 0 chrX 145923996 145924149 -20726147 + (TTTC)n Simple_repeat Simple_repeat 4 157 0 7 1698 3675 81 10 4 chrX 145924159 145924667 -20725629 - L1_Mus1 LINE L1 -2 6565 6055 7 1698 570 226 0 0 chrX 145924667 145924773 -20725523 - ID_B1 SINE B4 -18 206 101 8 1698 215 306 0 53 chrX 145924755 145924831 -20725465 - ID2 SINE ID -10 73 2 8 1698 34 24 0 0 chrX 145925173 145925214 -20725082 + AT_rich Low_complexity Low_complexity 1 41 0 8 1698 244 300 25 12 chrX 145925338 145925419 -20724877 + MER20 DNA MER1_type 121 202 -17 8 1698 875 117 51 127 chrX 145925801 145926019 -20724277 - B2_Mm2 SINE B2 -7 188 1 8 1698 295 288 39 85 chrX 145926069 145926198 -20724098 - RSINE1 SINE B4 -31 134 12 8 1698 484 277 41 28 chrX 145926193 145926338 -20723958 - ID_B1 SINE B4 -77 147 1 8 1698 281 295 132 83 chrX 145927592 145927736 -20722560 + MER5A DNA MER1_type 8 158 -31 8 1698 357 272 9 81 chrX 145927857 145927989 -20722307 - B3A SINE B2 -5 193 70 8 1698 307 303 109 36 chrX 145928019 145928156 -20722140 - B1F2 SINE Alu -1 148 2 8 1698 534 126 53 0 chrX 145928224 145928319 -20721977 - L1_Mur2 LINE L1 -2000 3877 3778 8 1698 235 286 24 94 chrX 145928327 145928412 -20721884 - ID4 SINE ID -2 81 3 8 1698 279 288 14 0 chrX 145928556 145928629 -20721667 + ID4_ SINE ID 7 80 -3 8 1698 424 282 81 0 chrX 145928704 145928828 -20721468 + ID_B1 SINE B4 81 214 -10 8 1698 303 268 26 18 chrX 145928867 145928981 -20721315 + PB1D10 SINE Alu 2 116 -1 8 1698 495 33 0 0 chrX 145928993 145929054 -20721242 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 1698 250 217 33 16 chrX 145929459 145929520 -20720776 + BC1_Mm scRNA scRNA 22 83 -69 8 1698 354 23 0 0 chrX 145930040 145930083 -20720213 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 8 1698 308 241 53 53 chrX 145930153 145930267 -20720029 - B4A SINE B4 -173 119 6 8 1698 233 67 0 0 chrX 145930650 145930680 -20719616 - L1_Mus1 LINE L1 -680 5887 5858 8 1698 868 123 19 0 chrX 145930678 145930840 -20719456 + L1_Mm LINE L1 5254 5418 -465 8 1698 2113 147 26 98 chrX 145930843 145930978 -20719318 - L1_Mur1 LINE L1 -2340 3546 3423 8 1698 1575 133 49 18 chrX 145930978 145931262 -20719034 - Lx LINE L1 -4 6650 6358 8 1698 2113 147 26 98 chrX 145931262 145931669 -20718627 - L1_Mur1 LINE L1 -2464 3422 3043 8 1698 186 0 47 93 chrX 145931682 145931725 -20718571 + (TTTTTA)n Simple_repeat Simple_repeat 2 42 0 8 1698 4520 71 2 15 chrX 145931739 145932339 -20717957 - L1Md_F2 LINE L1 -2 6580 5989 8 1698 241 347 60 20 chrX 145932506 145932606 -20717690 - B1F SINE Alu -29 120 17 8 1698 224 268 126 35 chrX 145932654 145932787 -20717509 - B1_Mm SINE Alu -2 146 3 8 1698 216 224 16 65 chrX 145932875 145932937 -20717359 + B4 SINE B4 15 73 -219 8 1698 1884 80 15 4 chrX 145933239 145933504 -20716792 - RLTR1C LTR ERV1 0 503 236 8 1698 705 10 105 48 chrX 145933503 145933608 -20716688 - RLTR1C LTR ERV1 -392 111 1 8 1698 13572 91 46 22 chrX 145933608 145935756 -20714540 - MMVL30-int LTR ERV1 0 3698 1501 8 1698 261 0 0 0 chrX 145935901 145935930 -20714366 + (TC)n Simple_repeat Simple_repeat 2 30 0 8 1698 279 0 0 0 chrX 145935930 145935960 -20714336 + (TA)n Simple_repeat Simple_repeat 2 32 0 8 1698 467 154 54 141 chrX 145936064 145936349 -20713947 - MMVL30-int LTR ERV1 -2190 1508 960 8 1698 4391 133 11 4 chrX 145936414 145937147 -20713149 - MMVL30-int LTR ERV1 -2245 1453 716 8 1698 223 193 35 17 chrX 145937478 145937536 -20712760 + (CAAA)n Simple_repeat Simple_repeat 4 62 0 8 1698 2548 180 9 35 chrX 145937574 145938121 -20712175 - MMVL30-int LTR ERV1 -7023 533 1 8 1698 3829 82 4 0 chrX 145938121 145938622 -20711674 - RLTR1C LTR ERV1 0 503 1 8 1698 273 241 25 12 chrX 145938713 145938793 -20711503 + B3 SINE B2 125 205 -11 8 1698 2112 129 9 9 chrX 145938813 145939156 -20711140 + RMER17D LTR ERVK 547 889 0 8 1698 407 166 0 11 chrX 145939156 145939254 -20711042 - Lx LINE L1 -12 6642 6530 8 1698 429 156 0 0 chrX 145939627 145939704 -20710592 + (CCCA)n Simple_repeat Simple_repeat 3 79 0 8 1698 237 400 25 43 chrX 145939704 145939866 -20710430 - L2b LINE L2 0 3375 3217 8 1698 491 291 61 0 chrX 145942844 145943040 -20707256 - L1MC1 LINE L1 -163 6170 5963 8 1698 21 89 0 0 chrX 145943808 145943864 -20706432 + AT_rich Low_complexity Low_complexity 1 56 0 8 1698 281 326 0 0 chrX 145944556 145944645 -20705651 + PB1D10 SINE Alu 27 115 -2 8 1698 5419 110 19 5 chrX 145944787 145946418 -20703878 - L1VL2 LINE L1 -1789 1826 172 8 1698 253 269 26 38 chrX 145946415 145946542 -20703754 - L1MC1 LINE L1 -390 5954 5836 8 1698 261 333 0 0 chrX 145946604 145946685 -20703611 - ID4_ SINE ID 0 83 3 8 1698 220 125 41 20 chrX 145946871 145946920 -20703376 + A-rich Low_complexity Low_complexity 2 51 0 8 1698 335 248 8 66 chrX 145946999 145947120 -20703176 - L1MCa LINE L1 -5875 633 520 8 1698 312 298 17 42 chrX 145947312 145947431 -20702865 - PB1 SINE Alu -3 124 9 8 1698 476 303 87 19 chrX 145947495 145947761 -20702535 - L1MCa LINE L1 -6220 288 5 8 1698 417 265 89 22 chrX 145947986 145948121 -20702175 - B1F2 SINE Alu 0 149 6 8 1698 348 263 40 0 chrX 145948261 145948360 -20701936 + MER53 DNA hAT 91 193 0 8 1698 197 344 11 32 chrX 145948427 145948520 -20701776 + MER5A DNA MER1_type 1 91 -98 8 1698 603 40 0 0 chrX 145948547 145948621 -20701675 + (TCCC)n Simple_repeat Simple_repeat 3 76 0 8 1698 359 89 0 18 chrX 145948666 145948723 -20701573 + (TCCC)n Simple_repeat Simple_repeat 4 59 0 8 1698 194 254 0 83 chrX 145948752 145948812 -20701484 - L3 LINE CR1 -3646 843 789 8 1698 356 338 14 43 chrX 145948812 145948951 -20701345 + LTR16A1 LTR ERVL 47 181 -275 8 1698 186 103 0 0 chrX 145948973 145949002 -20701294 + (TCTCCC)n Simple_repeat Simple_repeat 1 29 0 8 1698 1150 233 79 76 chrX 145949222 145949269 -20701027 + ORR1D1 LTR MaLR 1 38 -336 8 1698 1104 73 0 0 chrX 145949269 145949406 -20700890 + B1_Mus1 SINE Alu 3 139 -9 8 1698 196 53 26 26 chrX 145949406 145949445 -20700851 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 1698 1150 233 79 76 chrX 145949445 145949643 -20700653 + ORR1D1 LTR MaLR 39 230 -144 8 1698 186 71 0 0 chrX 145949643 145949671 -20700625 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 8 1698 1150 233 79 76 chrX 145949671 145949790 -20700506 + ORR1D1 LTR MaLR 231 366 -8 8 1698 1795 141 0 45 chrX 145950036 145950349 -20699947 + Lx3B LINE L1 6672 6970 -3 8 1698 343 282 0 0 chrX 145950635 145950706 -20699590 + B1F SINE Alu 21 91 -58 8 1698 604 199 21 35 chrX 145950832 145950973 -20699323 + B1_Mur3 SINE Alu 5 143 -6 8 1698 379 298 20 66 chrX 145951018 145951169 -20699127 + RSINE1 SINE B4 5 148 -17 8 1698 444 37 0 0 chrX 145951179 145951233 -20699063 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 8 1698 1553 249 68 14 chrX 145951260 145951687 -20698609 - Lx6 LINE L1 -181 7279 6830 8 1698 709 291 39 0 chrX 145952003 145952206 -20698090 - ID_B1 SINE B4 -12 212 2 8 1698 2424 139 17 7 chrX 145952255 145952662 -20697634 + Lx2A LINE L1 6589 6999 -9 8 1698 252 86 0 0 chrX 145952662 145952697 -20697599 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 1698 395 309 30 72 chrX 145952728 145952982 -20697314 + B3 SINE B2 48 209 -7 8 1698 216 167 0 57 chrX 145953941 145954011 -20696285 + A-rich Low_complexity Low_complexity 4 69 0 8 1698 257 184 102 0 chrX 145954140 145954189 -20696107 - ID_B1 SINE B4 -17 207 154 8 1698 283 320 30 40 chrX 145954362 145954463 -20695833 + PB1D7 SINE Alu 19 118 -2 8 1698 446 252 210 8 chrX 145954467 145954591 -20695705 + B3 SINE B2 3 151 -65 8 1698 5847 25 0 0 chrX 145954732 145955445 -20694851 - L1_Mm LINE L1 -195 5688 4976 8 1698 1197 21 0 0 chrX 145955446 145955591 -20694705 + L1Md_A LINE L1 6436 6580 -2 8 1698 540 162 0 0 chrX 145955779 145955884 -20694412 + (CCTA)n Simple_repeat Simple_repeat 3 107 0 8 1698 773 258 19 15 chrX 145955896 145956101 -20694195 - ID_B1 SINE B4 -17 207 2 8 1698 341 335 63 96 chrX 145956308 145956692 -20693604 - ORR1E LTR MaLR 0 370 1 8 1698 567 326 0 7 chrX 145956823 145956971 -20693325 + B1F1 SINE Alu 1 147 -2 8 1698 371 295 18 37 chrX 145957109 145957218 -20693078 + B3A SINE B2 1 107 -91 8 1698 21 36 0 0 chrX 145957241 145957269 -20693027 + AT_rich Low_complexity Low_complexity 1 28 0 8 1698 675 354 18 4 chrX 145957305 145957532 -20692764 + B4A SINE B4 2 231 -61 8 1698 547 308 13 19 chrX 145957533 145957692 -20692604 + RSINE1 SINE B4 6 163 -2 8 1698 258 190 0 79 chrX 145957732 145957795 -20692501 + B4A SINE B4 235 292 0 8 1698 296 238 12 70 chrX 145957988 145958074 -20692222 - ID4 SINE ID 0 83 3 8 1698 273 304 95 35 chrX 145958089 145958205 -20692091 + MER58B DNA MER1_type 172 294 -47 8 1698 385 344 24 8 chrX 145958618 145958741 -20691555 - B4A SINE B4 -166 126 2 8 1698 305 286 0 16 chrX 145959288 145959384 -20690912 + ID4 SINE ID 9 102 -50 8 1698 428 202 7 118 chrX 145959540 145959675 -20690621 + MT2B LTR ERVL 145 264 -337 8 1698 765 157 0 8 chrX 145959570 145959698 -20690598 + B1_Mus2 SINE Alu 9 135 -12 8 1698 978 117 0 0 chrX 145959698 145959877 -20690419 + (GA)n Simple_repeat Simple_repeat 2 180 0 8 1698 200 280 0 0 chrX 145959882 145959932 -20690364 + GA-rich Low_complexity Low_complexity 5 54 0 8 1698 227 235 0 19 chrX 145959940 145959992 -20690304 + B3A SINE B2 1 51 -147 8 1698 217 354 31 10 chrX 145960496 145960593 -20689703 - MIRb SINE MIR -50 218 120 8 1698 3554 134 39 23 chrX 145961282 145962357 -20687939 + RLTR13D1 LTR ERVK 1 788 -18 8 1698 532 329 28 5 chrX 145962893 145963110 -20687186 - MLT1E2 LTR MaLR -30 597 376 8 1698 536 0 16 0 chrX 145963351 145963415 -20686881 + (TTTTG)n Simple_repeat Simple_repeat 1 65 0 8 1698 814 178 0 0 chrX 145963415 145963544 -20686752 - B1_Mus1 SINE Alu -13 135 7 8 1698 513 0 0 0 chrX 145963563 145963620 -20686676 + (GGAA)n Simple_repeat Simple_repeat 2 58 0 8 1698 237 263 18 0 chrX 145963656 145963713 -20686583 + ID4_ SINE ID 24 81 -2 8 1698 227 293 40 0 chrX 145963713 145963726 -20686570 + ID_B1 SINE B4 25 97 -127 8 1698 737 302 19 0 chrX 145964065 145964270 -20686026 + ID_B1 SINE B4 3 211 -13 8 1698 222 278 90 31 chrX 145964380 145964485 -20685811 - B1F2 SINE Alu -35 114 9 9 1698 21 0 0 0 chrX 145964643 145964664 -20685632 + AT_rich Low_complexity Low_complexity 1 21 0 9 1698 226 82 19 58 chrX 145965095 145965147 -20685149 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 9 1698 378 287 70 0 chrX 145965147 145965262 -20685034 - ID_B1 SINE B4 0 224 102 9 1698 320 323 57 106 chrX 145965274 145965520 -20684776 - L1MB8 LINE L1 -9 6169 5936 9 1698 326 283 17 17 chrX 145966217 145966332 -20683964 + (TCTG)n Simple_repeat Simple_repeat 2 116 0 9 1698 265 287 245 0 chrX 145966390 145966484 -20683812 - B3A SINE B2 -80 118 2 9 1698 271 264 25 89 chrX 145967154 145967233 -20683063 + RSINE1 SINE B4 92 165 0 9 1698 612 71 0 0 chrX 145967289 145967373 -20682923 - BC1_Mm scRNA scRNA -56 96 13 9 1698 254 29 0 0 chrX 145967373 145967408 -20682888 + L1_Mus2 LINE L1 6526 6560 -6 9 1698 29 28 0 0 chrX 145967408 145967444 -20682852 + AT_rich Low_complexity Low_complexity 1 36 0 9 1698 621 293 191 17 chrX 145967667 145967960 -20682336 + MTE2a LTR MaLR 1 344 -35 9 1698 190 27 51 51 chrX 145967960 145967999 -20682297 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 9 1698 1017 132 0 0 chrX 145968000 145968144 -20682152 - B1_Mus2 SINE Alu -3 144 1 9 1698 286 276 0 0 chrX 145968460 145968518 -20681778 - PB1D10 SINE Alu -37 80 23 9 1698 363 44 0 0 chrX 145968526 145968571 -20681725 + (CCCTG)n Simple_repeat Simple_repeat 2 46 0 9 1698 513 92 0 0 chrX 145968739 145968815 -20681481 + (TC)n Simple_repeat Simple_repeat 2 77 0 9 1698 327 282 93 8 chrX 145968817 145968830 -20681466 - B1F SINE Alu 0 149 132 9 1698 3911 71 2 2 chrX 145968830 145969341 -20680955 - L1_Mus1 LINE L1 -2 6565 6055 9 1698 327 282 93 8 chrX 145969341 145969445 -20680851 - B1F SINE Alu -18 131 22 9 1698 524 277 0 8 chrX 145969445 145969461 -20680835 - ID_B1 SINE B4 -18 206 88 9 1698 254 245 0 0 chrX 145969455 145969504 -20680792 - ID SINE ID -174 50 2 9 1698 1884 63 82 0 chrX 145969703 145969973 -20680323 - L1Md_F2 LINE L1 -526 6056 5765 9 1698 2832 110 87 46 chrX 145970739 145971236 -20679060 + MURVY-LTR LTR ERV1 1 517 -2 9 1698 253 286 15 53 chrX 145971238 145971371 -20678925 + RLTR6-int LTR ERV1 3 130 -4933 9 1698 270 246 50 17 chrX 145971410 145971530 -20678766 + RLTR6-int LTR ERV1 145 268 -7510 9 1698 3787 284 24 36 chrX 145971586 145973334 -20676962 + RLTR6-int LTR ERV1 350 2336 -5442 9 1698 5846 308 42 22 chrX 145973469 145975283 -20675013 + RLTR6-int LTR ERV1 2714 4574 -3204 9 1698 876 133 0 0 chrX 145975283 145975426 -20674870 + (GAAA)n Simple_repeat Simple_repeat 2 144 0 9 1698 5846 308 42 22 chrX 145975426 145976489 -20673807 + RLTR6-int LTR ERV1 4575 5648 -2130 9 1698 2448 139 124 34 chrX 145976761 145977237 -20673059 + MURVY-LTR LTR ERV1 1 519 0 9 1698 341 184 9 0 chrX 145977401 145977515 -20672781 + (TG)n Simple_repeat Simple_repeat 1 115 0 9 1698 305 267 25 41 chrX 145977692 145977813 -20672483 + PB1D9 SINE Alu 2 120 0 9 1698 2332 105 239 26 chrX 145978318 145978770 -20671526 + RLTR6_Mm LTR ERV1 37 584 -70 9 1698 306 331 30 48 chrX 145979182 145979350 -20670946 - B4 SINE B4 -18 274 110 9 1698 363 345 14 27 chrX 145979422 145979568 -20670728 - RSINE1 SINE B4 -19 146 3 9 1698 228 241 16 65 chrX 145980376 145980438 -20669858 + B4 SINE B4 15 73 -219 9 1698 3644 91 0 18 chrX 145980742 145981254 -20669042 - RLTR1C LTR ERV1 0 503 1 9 1698 420 306 109 29 chrX 145981287 145981462 -20668834 + B3 SINE B2 24 212 -4 9 1698 363 252 40 0 chrX 145981805 145981904 -20668392 + MER53 DNA hAT 91 193 0 9 1698 191 344 11 32 chrX 145981971 145982064 -20668232 + MER5A DNA MER1_type 1 91 -98 9 1698 510 61 0 0 chrX 145982091 145982157 -20668139 + (TCCC)n Simple_repeat Simple_repeat 3 68 0 9 1698 365 102 0 17 chrX 145982199 145982259 -20668037 + (TCCC)n Simple_repeat Simple_repeat 4 62 0 9 1698 362 329 20 41 chrX 145982349 145982495 -20667801 + LTR16A1 LTR ERVL 47 189 -267 9 1698 186 103 0 0 chrX 145982510 145982539 -20667757 + (TCTCCC)n Simple_repeat Simple_repeat 1 29 0 9 1698 1150 233 79 76 chrX 145982758 145982805 -20667491 + ORR1D1 LTR MaLR 1 38 -336 9 1698 1131 66 0 0 chrX 145982805 145982942 -20667354 + B1_Mus1 SINE Alu 3 139 -9 9 1698 196 53 26 26 chrX 145982942 145982981 -20667315 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 9 1698 1150 233 79 76 chrX 145982981 145983179 -20667117 + ORR1D1 LTR MaLR 39 230 -144 9 1698 186 71 0 0 chrX 145983179 145983207 -20667089 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 9 1698 1150 233 79 76 chrX 145983207 145983326 -20666970 + ORR1D1 LTR MaLR 231 366 -8 9 1698 1795 141 0 45 chrX 145983572 145983885 -20666411 + Lx3B LINE L1 6672 6970 -3 9 1698 343 282 0 0 chrX 145984171 145984242 -20666054 + B1F SINE Alu 21 91 -58 9 1698 604 199 21 35 chrX 145984368 145984509 -20665787 + B1_Mur3 SINE Alu 5 143 -6 9 1698 379 298 20 66 chrX 145984554 145984705 -20665591 + RSINE1 SINE B4 5 148 -17 9 1698 465 19 0 0 chrX 145984715 145984769 -20665527 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 9 1698 1534 245 70 16 chrX 145984796 145985223 -20665073 - Lx6 LINE L1 -181 7279 6830 9 1698 737 286 39 0 chrX 145985539 145985742 -20664554 - ID_B1 SINE B4 -12 212 2 9 1698 2372 144 17 7 chrX 145985791 145986198 -20664098 + Lx2A LINE L1 6589 6999 -9 9 1698 252 86 0 0 chrX 145986198 145986233 -20664063 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 9 1698 409 281 26 58 chrX 145986363 145986518 -20663778 + B3 SINE B2 60 209 -7 9 1698 193 119 0 45 chrX 145987501 145987545 -20662751 + A-rich Low_complexity Low_complexity 3 44 0 9 1698 215 254 91 0 chrX 145987648 145987703 -20662593 - B1F1 SINE Alu -21 128 69 9 1698 231 204 102 0 chrX 145987671 145987720 -20662576 - ID_B1 SINE B4 -17 207 154 9 1698 283 320 30 40 chrX 145987893 145987994 -20662302 + PB1D7 SINE Alu 19 118 -2 9 1698 446 252 210 8 chrX 145987998 145988122 -20662174 + B3 SINE B2 3 151 -65 9 1698 5847 25 0 0 chrX 145988263 145988976 -20661320 - L1_Mm LINE L1 -195 5688 4976 9 1698 1197 21 0 0 chrX 145988977 145989122 -20661174 + L1Md_A LINE L1 6436 6580 -2 9 1698 495 151 0 0 chrX 145989308 145989401 -20660895 + (TCTA)n Simple_repeat Simple_repeat 1 93 0 9 1698 773 258 19 15 chrX 145989415 145989620 -20660676 - ID_B1 SINE B4 -17 207 2 9 1698 341 335 63 96 chrX 145989823 145990207 -20660089 - ORR1E LTR MaLR 0 370 1 9 1698 567 326 0 7 chrX 145990338 145990486 -20659810 + B1F1 SINE Alu 1 147 -2 9 1698 361 305 18 37 chrX 145990624 145990733 -20659563 + B3A SINE B2 1 107 -91 9 1698 21 36 0 0 chrX 145990756 145990784 -20659512 + AT_rich Low_complexity Low_complexity 1 28 0 9 1698 675 354 18 4 chrX 145990820 145991047 -20659249 + B4A SINE B4 2 231 -61 9 1698 560 308 13 19 chrX 145991048 145991207 -20659089 + RSINE1 SINE B4 6 163 -2 9 1698 258 190 0 79 chrX 145991247 145991310 -20658986 + B4A SINE B4 235 292 0 9 1698 296 238 12 70 chrX 145991503 145991589 -20658707 - ID4 SINE ID 0 83 3 9 1698 286 295 95 35 chrX 145991604 145991720 -20658576 + MER58B DNA MER1_type 172 294 -47 9 1698 385 344 24 8 chrX 145992027 145992150 -20658146 - B4A SINE B4 -166 126 2 9 1698 305 286 0 16 chrX 145992697 145992793 -20657503 + ID4 SINE ID 9 102 -50 9 1698 428 202 7 118 chrX 145992949 145993084 -20657212 + MT2B LTR ERVL 145 264 -337 9 1698 765 157 0 8 chrX 145992979 145993107 -20657189 + B1_Mus2 SINE Alu 9 135 -12 9 1698 1044 106 0 0 chrX 145993107 145993286 -20657010 + (GA)n Simple_repeat Simple_repeat 2 180 0 9 1698 200 280 0 0 chrX 145993297 145993347 -20656949 + GA-rich Low_complexity Low_complexity 5 54 0 9 1698 227 235 0 19 chrX 145993355 145993407 -20656889 + B3A SINE B2 1 51 -147 9 1698 203 371 20 10 chrX 145993913 145994011 -20656285 - MIRb SINE MIR -50 218 120 9 1698 3559 133 39 23 chrX 145994702 145995775 -20654521 + RLTR13D1 LTR ERVK 3 788 -18 9 1698 532 329 28 5 chrX 145996311 145996528 -20653768 - MLT1E2 LTR MaLR -30 597 376 9 1698 450 0 0 0 chrX 145996769 145996819 -20653477 + (TTTTG)n Simple_repeat Simple_repeat 1 50 0 9 1698 814 178 0 0 chrX 145996819 145996948 -20653348 - B1_Mus1 SINE Alu -13 135 7 9 1698 549 0 0 0 chrX 145996967 145997028 -20653268 + (GGAA)n Simple_repeat Simple_repeat 2 62 0 9 1698 237 263 18 0 chrX 145997064 145997121 -20653175 + ID4_ SINE ID 24 81 -2 9 1698 227 293 40 0 chrX 145997121 145997134 -20653162 + ID_B1 SINE B4 25 97 -127 9 1698 737 302 19 0 chrX 145997473 145997678 -20652618 + ID_B1 SINE B4 3 211 -13 9 1698 241 268 90 31 chrX 145997788 145997893 -20652403 - B1F2 SINE Alu -35 114 9 9 1698 226 82 19 58 chrX 145998502 145998554 -20651742 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 9 1698 378 287 70 0 chrX 145998554 145998669 -20651627 - ID_B1 SINE B4 0 224 102 9 1698 326 318 58 107 chrX 145998684 145998927 -20651369 - L1MB8 LINE L1 -12 6166 5936 9 1698 196 120 0 39 chrX 145999634 145999686 -20650610 + (TCTCTG)n Simple_repeat Simple_repeat 5 54 0 9 1698 204 182 0 0 chrX 145999696 145999740 -20650556 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 9 1698 265 287 245 0 chrX 145999797 145999891 -20650405 - B3A SINE B2 -80 118 2 9 1698 265 268 26 90 chrX 146000564 146000642 -20649654 + RSINE1 SINE B4 92 164 -1 1 1698 614 71 0 0 chrX 146000698 146000782 -20649514 - BC1_Mm scRNA scRNA -56 96 13 2 1698 264 31 4 45 chrX 146000782 146000836 -20649460 + L1_Mus2 LINE L1 6526 6581 -1 3 1698 617 293 191 17 chrX 146001076 146001369 -20648927 + MTE2a LTR MaLR 1 344 -35 4 1698 1080 132 0 0 chrX 146001405 146001549 -20648747 - B1_Mus2 SINE Alu -3 144 1 5 1698 287 276 0 0 chrX 146001865 146001923 -20648373 - PB1D10 SINE Alu -37 80 23 6 1698 363 44 0 0 chrX 146001931 146001976 -20648320 + (CCCTG)n Simple_repeat Simple_repeat 2 46 0 7 1698 405 109 0 0 chrX 146002144 146002208 -20648088 + (TC)n Simple_repeat Simple_repeat 2 65 0 8 1698 338 273 86 50 chrX 146002210 146002223 -20648073 - B1F2 SINE Alu 0 149 132 9 1698 4168 71 2 2 chrX 146002223 146002734 -20647562 - L1_Mus1 LINE L1 -2 6565 6055 1 1698 338 273 86 50 chrX 146002734 146002859 -20647437 - B1F2 SINE Alu -18 131 6 9 1698 535 263 0 10 chrX 146002859 146002897 -20647399 - ID_B1 SINE B4 -18 206 2 1 1698 2029 62 88 0 chrX 146003096 146003370 -20646926 - L1Md_F2 LINE L1 -526 6056 5759 1 1698 3027 112 87 46 chrX 146004132 146004629 -20645667 + MURVY-LTR LTR ERV1 1 517 -2 1 1698 325 281 44 72 chrX 146004631 146004923 -20645373 + RLTR6-int LTR ERV1 3 268 -7510 1 1698 4345 284 24 36 chrX 146004970 146006727 -20643569 + RLTR6-int LTR ERV1 343 2336 -5442 1 1698 5046 313 33 31 chrX 146006862 146009876 -20640420 + RLTR6-int LTR ERV1 2632 5290 -2311 1 1698 2635 137 126 34 chrX 146010148 146010623 -20639673 + MURVY-LTR LTR ERV1 1 519 0 1 1698 341 184 9 0 chrX 146010787 146010901 -20639395 + (TG)n Simple_repeat Simple_repeat 1 115 0 1 1698 345 252 16 73 chrX 146011078 146011202 -20639094 + PB1D9 SINE Alu 2 118 -2 1 1698 2342 100 241 29 chrX 146011704 146012156 -20638140 + RLTR6_Mm LTR ERV1 37 584 -70 1 1698 362 291 42 60 chrX 146012569 146012737 -20637559 - B4 SINE B4 -18 274 110 1 1698 287 362 20 34 chrX 146012810 146012956 -20637340 - RSINE1 SINE B4 -19 146 3 1 1698 438 114 0 0 chrX 146013061 146013131 -20637165 + (A)n Simple_repeat Simple_repeat 1 70 0 2 1698 243 320 67 19 chrX 146013593 146013698 -20636598 - ID_B1 SINE B4 -7 217 108 2 1698 265 111 0 0 chrX 146013836 146013872 -20636424 + B4 SINE B4 38 73 -219 2 212 3584 117 18 4 chrX 146014179 146014675 -20635621 - RLTR1C LTR ERV1 0 503 1 2 1699 470 245 159 0 chrX 146014708 146014871 -20635425 + B3 SINE B2 24 212 -4 2 1699 497 100 11 0 chrX 146016065 146016155 -20634141 + (TG)n Simple_repeat Simple_repeat 1 91 0 2 1699 311 302 0 25 chrX 146016393 146016515 -20633781 + PB1D9 SINE Alu 2 120 0 2 1699 314 304 42 60 chrX 146017332 146017500 -20632796 - B4 SINE B4 -18 274 110 2 1699 407 345 14 27 chrX 146017572 146017718 -20632578 - RSINE1 SINE B4 -19 146 3 2 1699 237 167 0 0 chrX 146018551 146018587 -20631709 + B4 SINE B4 38 73 -219 2 1699 3934 89 0 16 chrX 146018891 146019402 -20630894 - RLTR1C LTR ERV1 0 503 1 3 1699 375 318 109 29 chrX 146019435 146019610 -20630686 + B3 SINE B2 24 212 -4 3 1699 419 155 10 0 chrX 146020824 146020927 -20629369 + (TG)n Simple_repeat Simple_repeat 1 104 0 3 1699 349 299 17 25 chrX 146021151 146021271 -20629025 + PB1D9 SINE Alu 2 120 0 3 1699 21 0 0 0 chrX 146021409 146021430 -20628866 + AT_rich Low_complexity Low_complexity 1 21 0 3 1699 324 298 24 47 chrX 146022110 146022237 -20628059 - B4 SINE B4 -46 246 123 3 1699 296 301 67 19 chrX 146023088 146023193 -20627103 - ID_B1 SINE B4 -7 217 108 3 1699 223 322 131 8 chrX 146023193 146023210 -20627086 - B1_Mus1 SINE Alu -7 141 5 3 1699 246 206 29 29 chrX 146023297 146023367 -20626929 + B4 SINE B4 4 73 -219 3 1699 508 248 123 32 chrX 146023690 146023844 -20626452 + B3 SINE B2 24 191 -25 3 1699 406 151 19 0 chrX 146025084 146025190 -20625106 + (TG)n Simple_repeat Simple_repeat 2 109 0 4 1699 355 274 8 64 chrX 146025418 146025543 -20624753 + PB1D9 SINE Alu 2 119 -1 4 1699 222 326 0 0 chrX 146026240 146026329 -20623967 + (TG)n Simple_repeat Simple_repeat 2 90 0 4 1699 308 298 24 47 chrX 146026386 146026513 -20623783 - B4 SINE B4 -46 246 123 4 1699 257 380 14 27 chrX 146026599 146026745 -20623551 - RSINE1 SINE B4 -19 146 3 4 1699 234 325 12 0 chrX 146026757 146026840 -20623456 - B4 SINE B4 -207 85 2 4 1699 210 241 16 65 chrX 146027552 146027614 -20622682 + B4 SINE B4 15 73 -219 4 1699 3977 92 0 2 chrX 146027918 146028422 -20621874 - RLTR1C LTR ERV1 0 503 1 4 1699 312 277 156 40 chrX 146028583 146028756 -20621540 + B3 SINE B2 24 216 0 4 1699 321 123 0 0 chrX 146029946 146030011 -20620285 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 1699 340 282 0 57 chrX 146030266 146030390 -20619906 + PB1D9 SINE Alu 2 118 -2 4 1699 292 351 51 34 chrX 146031173 146031350 -20618946 - B4 SINE B4 -3 289 110 5 1699 298 358 32 32 chrX 146031413 146031569 -20618727 - RSINE1 SINE B4 -7 158 3 5 1699 243 320 67 19 chrX 146032190 146032295 -20618001 - ID_B1 SINE B4 -7 217 108 5 1699 227 167 0 0 chrX 146032433 146032469 -20617827 + B4 SINE B4 38 73 -219 5 1699 3724 103 14 4 chrX 146032773 146033270 -20617026 - RLTR1C LTR ERV1 0 503 2 5 1699 478 260 115 29 chrX 146033304 146033478 -20616818 + B3 SINE B2 24 212 -4 5 1699 959 93 6 0 chrX 146034672 146034834 -20615462 + (TG)n Simple_repeat Simple_repeat 1 163 0 5 1699 377 278 8 25 chrX 146035060 146035178 -20615118 + PB1D9 SINE Alu 5 120 0 5 1699 31 44 0 0 chrX 146035316 146035361 -20614935 + AT_rich Low_complexity Low_complexity 1 45 0 5 1699 447 19 0 0 chrX 146035873 146035925 -20614371 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1699 364 335 22 38 chrX 146036018 146036201 -20614095 - B4 SINE B4 -3 289 110 6 1699 435 314 28 35 chrX 146036274 146036419 -20613877 - RSINE1 SINE B4 -19 146 3 6 1699 542 125 0 9 chrX 146037605 146037718 -20612578 + (TG)n Simple_repeat Simple_repeat 1 112 0 6 1699 314 322 8 25 chrX 146037944 146038065 -20612231 + PB1D9 SINE Alu 2 120 0 6 1699 412 68 14 14 chrX 146038499 146038573 -20611723 + (TTTTG)n Simple_repeat Simple_repeat 2 75 0 6 1699 238 340 48 0 chrX 146039772 146039875 -20610421 + PB1D7 SINE Alu 3 110 -10 6 1699 1292 176 29 29 chrX 146040035 146040310 -20609986 + Lx2A1 LINE L1 6733 7007 -1 6 1699 389 230 2 16 chrX 146040361 146040447 -20609849 + ID SINE ID 9 88 -204 6 1699 2360 199 43 35 chrX 146040468 146040978 -20609318 + Lx LINE L1 6134 6647 -7 6 1699 2450 174 25 27 chrX 146040959 146041146 -20609150 + L1_Mm LINE L1 5267 5459 -424 6 1699 1321 125 64 18 chrX 146041146 146041366 -20608930 + L1_Mus3 LINE L1 6405 6634 -4 7 1699 2450 174 25 27 chrX 146041366 146041661 -20608635 + L1_Mm LINE L1 5460 5748 -135 6 1699 1951 149 26 3 chrX 146041654 146041998 -20608298 - L1_Mur2 LINE L1 -576 5301 4950 7 1699 221 303 0 33 chrX 146042365 146042457 -20607839 + (TATATG)n Simple_repeat Simple_repeat 3 91 0 7 1699 479 333 7 116 chrX 146042485 146042536 -20607760 - B4 SINE B4 -26 266 217 7 1699 239 0 32 0 chrX 146042536 146042567 -20607729 + (TTG)n Simple_repeat Simple_repeat 2 33 0 7 1699 479 333 7 116 chrX 146042567 146042724 -20607572 - B4 SINE B4 -76 216 79 7 1699 363 331 98 33 chrX 146042724 146042877 -20607419 - RSINE1 SINE B4 0 165 3 7 1699 479 333 7 116 chrX 146042877 146042952 -20607344 - B4 SINE B4 -214 78 13 7 1699 4164 250 35 29 chrX 146043389 146044682 -20605614 - Lx9 LINE L1 -8 7636 6181 7 1699 1065 126 0 0 chrX 146044682 146044857 -20605439 + (TA)n Simple_repeat Simple_repeat 2 176 0 7 1699 927 284 32 65 chrX 146044857 146045337 -20604959 - Lx9 LINE L1 -1293 6180 5715 7 1699 330 250 0 85 chrX 146045315 146045433 -20604863 - L1_Rod LINE L1 -1525 4322 4215 7 1699 593 278 145 4 chrX 146045643 146045885 -20604411 + Lx8 LINE L1 7196 7471 -2 7 1699 277 286 91 45 chrX 146045911 146045999 -20604297 + B3A SINE B2 25 116 -82 8 1699 432 0 0 0 chrX 146046050 146046098 -20604198 + (TG)n Simple_repeat Simple_repeat 1 48 0 8 1699 369 334 9 36 chrX 146047311 146047451 -20602845 - B1F SINE Alu -1 148 13 8 1699 589 306 61 1 chrX 146047781 146047954 -20602342 + B3A SINE B2 2 188 -28 8 1699 369 43 0 0 chrX 146047954 146048001 -20602295 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1699 583 312 82 10 chrX 146048001 146048021 -20602275 + B3 SINE B2 189 208 -8 8 1699 371 302 164 53 chrX 146048288 146048459 -20601837 + B4A SINE B4 74 263 -29 8 1699 609 14 0 0 chrX 146048498 146048568 -20601728 + (TC)n Simple_repeat Simple_repeat 2 71 0 8 1699 330 45 0 0 chrX 146048570 146048614 -20601682 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 1699 203 161 17 35 chrX 146048774 146048832 -20601464 + (GTTTG)n Simple_repeat Simple_repeat 3 59 0 8 1699 268 259 0 0 chrX 146048840 146048898 -20601398 - ID4_ SINE ID -17 66 9 8 1699 395 335 125 0 chrX 146048969 146049121 -20601175 - ID_B1 SINE B4 -52 172 2 9 1699 643 323 57 5 chrX 146050277 146050470 -20599826 + ID_B1 SINE B4 6 208 -16 9 1699 218 200 0 0 chrX 146050785 146050825 -20599471 + GA-rich Low_complexity Low_complexity 3 42 0 9 1699 9926 31 33 33 chrX 146051890 146053540 -20596756 - L1Md_T LINE L1 0 6582 4878 9 1699 238 167 46 77 chrX 146053540 146053605 -20596691 + RMER20A LTR ERVK 186 248 -268 9 1699 9926 31 33 33 chrX 146053605 146053861 -20596435 - L1Md_T LINE L1 0 4877 4612 9 1699 413 132 0 0 chrX 146053910 146053978 -20596318 - U3 snRNA snRNA -149 68 1 9 1699 288 260 0 0 chrX 146054277 146054354 -20595942 + (TG)n Simple_repeat Simple_repeat 2 78 0 9 1699 691 335 27 17 chrX 146054435 146054727 -20595569 - Lx9 LINE L1 -1067 6577 6283 9 1699 6323 135 27 18 chrX 146054727 146055897 -20594399 - Lx LINE L1 -1 6653 5476 9 1699 894 141 87 0 chrX 146055895 146056079 -20594217 - L1VL2 LINE L1 -444 3171 2972 9 1699 1076 124 11 0 chrX 146056081 146056258 -20594038 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1 1699 6584 100 12 3 chrX 146056748 146057728 -20592568 - L1Md_F2 LINE L1 -1 6581 5593 1 1699 11572 86 22 1 chrX 146057727 146060272 -20590024 - L1Md_F LINE L1 -2898 2985 387 1 1699 6364 115 53 29 chrX 146060274 146062055 -20588241 - L1VL2 LINE L1 -1449 2166 350 9 1699 662 222 56 0 chrX 146062055 146062199 -20588097 - L1VL2 LINE L1 -5893 442 291 9 1699 297 289 12 12 chrX 146062580 146062669 -20587627 + B3A SINE B2 1 89 -127 1 1699 241 353 48 62 chrX 146062669 146062725 -20587571 + ID_B1 SINE B4 1 143 -81 1 1699 223 224 143 13 chrX 146063197 146063274 -20587022 + MIR3 SINE MIR 85 171 -37 1 1699 184 356 14 0 chrX 146063983 146064056 -20586240 - MIRb SINE MIR -75 193 120 1 1699 467 346 29 0 chrX 146065311 146065516 -20584780 - MLT1E2 LTR MaLR -30 597 387 1 1699 798 211 0 14 chrX 146065779 146065923 -20584373 - B1_Mus1 SINE Alu 0 148 7 1 1699 573 115 0 0 chrX 146065941 146066028 -20584268 + (GGGA)n Simple_repeat Simple_repeat 2 88 0 1 1699 258 245 0 0 chrX 146066117 146066170 -20584126 + GA-rich Low_complexity Low_complexity 4 56 0 1 1699 697 320 29 0 chrX 146066457 146066663 -20583633 + ID_B1 SINE B4 3 214 -10 1 1699 264 317 48 38 chrX 146066769 146066874 -20583422 - PB1D10 SINE Alu -35 114 9 1 1699 244 337 61 0 chrX 146066928 146067026 -20583270 - B1F SINE Alu -37 112 9 1 1699 253 324 27 0 chrX 146067058 146067132 -20583164 - ID4 SINE ID -4 79 4 1 1699 275 65 0 21 chrX 146067511 146067558 -20582738 + (TTGG)n Simple_repeat Simple_repeat 3 48 0 1 1699 189 74 0 0 chrX 146067561 146067588 -20582708 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1 1699 385 239 67 50 chrX 146067588 146067673 -20582623 - ID_B1 SINE B4 -1 223 136 1 1699 3199 61 2 0 chrX 146067673 146068068 -20582228 + MTA_Mm LTR MaLR 1 396 0 1 1699 385 239 67 50 chrX 146068068 146068101 -20582195 - ID_B1 SINE B4 -89 135 103 1 1699 251 238 25 0 chrX 146068149 146068229 -20582067 - L1MB7 LINE L1 -56 6128 6047 1 1699 185 273 0 22 chrX 146068989 146069034 -20581262 - L3 LINE CR1 -2290 2199 2156 1 1699 196 120 0 39 chrX 146069071 146069123 -20581173 + (TCTCTG)n Simple_repeat Simple_repeat 5 54 0 1 1699 286 339 107 0 chrX 146069192 146069304 -20580992 - B3A SINE B2 -22 176 53 1 1699 246 62 0 0 chrX 146069715 146069747 -20580549 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1699 392 241 42 63 chrX 146070442 146070584 -20579712 - ID_B1 SINE B4 0 224 86 1 1699 297 0 0 0 chrX 146071319 146071352 -20578944 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1699 393 102 0 0 chrX 146071470 146071529 -20578767 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1699 602 111 130 0 chrX 146071554 146071662 -20578634 - BC1_Mm scRNA scRNA -18 134 13 1 1699 225 49 0 0 chrX 146071662 146071703 -20578593 + L1_Mus2 LINE L1 6526 6566 0 1 1699 24 32 0 0 chrX 146071703 146071734 -20578562 + AT_rich Low_complexity Low_complexity 1 31 0 1 1699 595 300 185 10 chrX 146071957 146072248 -20578048 + MTE2a LTR MaLR 1 342 -37 1 1699 287 0 0 50 chrX 146072248 146072288 -20578008 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1 1699 899 154 0 0 chrX 146072288 146072424 -20577872 - B1_Mus2 SINE Alu -11 136 1 1 1699 320 239 34 68 chrX 146072321 146072438 -20577858 - RLTR25B LTR ERVK -526 502 390 1 1699 180 111 0 0 chrX 146072438 146072465 -20577831 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1699 420 55 0 0 chrX 146072747 146072802 -20577494 + (CCCTG)n Simple_repeat Simple_repeat 2 56 0 1 1699 1133 28 7 0 chrX 146072970 146073111 -20577185 + (TTTC)n Simple_repeat Simple_repeat 4 145 0 1 1699 3738 75 10 4 chrX 146073121 146073629 -20576667 - L1_Mus1 LINE L1 -2 6565 6055 1 1699 565 241 0 14 chrX 146073629 146073793 -20576503 - ID_B1 SINE B4 -18 206 2 1 1699 34 24 0 0 chrX 146074133 146074174 -20576122 + AT_rich Low_complexity Low_complexity 1 41 0 1 1699 267 317 0 12 chrX 146074295 146074378 -20575918 + MER20 DNA MER1_type 121 202 -17 1 1699 895 127 49 120 chrX 146074762 146074982 -20575314 - B2_Mm2 SINE B2 -28 188 1 1 1699 268 297 39 85 chrX 146075032 146075161 -20575135 - RSINE1 SINE B4 -31 134 12 1 1699 505 269 41 28 chrX 146075156 146075301 -20574995 - ID_B1 SINE B4 -77 147 1 1 1699 353 326 67 54 chrX 146076554 146076703 -20573593 + MER5A DNA MER1_type 8 158 -31 1 1699 357 272 9 81 chrX 146076824 146076956 -20573340 - B3A SINE B2 -5 193 70 1 1699 294 297 153 23 chrX 146076991 146077122 -20573174 - B1F2 SINE Alu 0 149 2 1 1699 511 137 53 0 chrX 146077190 146077285 -20573011 - L1_Mur2 LINE L1 -2000 3877 3778 1 1699 243 286 24 94 chrX 146077293 146077378 -20572918 - ID2 SINE ID -2 81 3 1 1699 279 288 14 0 chrX 146077522 146077595 -20572701 + ID4_ SINE ID 7 80 -3 1 1699 445 274 81 0 chrX 146077670 146077794 -20572502 + ID_B1 SINE B4 81 214 -10 1 1699 303 268 26 18 chrX 146077833 146077947 -20572349 + PB1D10 SINE Alu 2 116 -1 1 1699 465 62 0 0 chrX 146077959 146078024 -20572272 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 1699 250 217 33 16 chrX 146078426 146078487 -20571809 + BC1_Mm scRNA scRNA 22 83 -69 1 1699 210 37 0 0 chrX 146079020 146079047 -20571249 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1699 299 239 51 61 chrX 146079136 146079234 -20571062 - B4A SINE B4 -190 102 6 1 1699 245 33 0 0 chrX 146079618 146079648 -20570648 - L1_Mus1 LINE L1 -680 5887 5858 1 1699 867 113 7 0 chrX 146079646 146079797 -20570499 + L1_Mm LINE L1 5254 5405 -478 1 1699 2190 145 26 83 chrX 146079811 146079946 -20570350 - L1_Mur1 LINE L1 -2340 3546 3423 1 1699 1562 133 49 21 chrX 146079946 146080231 -20570065 - Lx LINE L1 -4 6650 6358 1 1699 2190 145 26 83 chrX 146080231 146080628 -20569668 - L1_Mur1 LINE L1 -2464 3422 3044 1 1699 207 0 24 73 chrX 146080647 146080688 -20569608 + (TTTTTA)n Simple_repeat Simple_repeat 5 43 0 1 1699 4550 68 2 13 chrX 146080700 146081297 -20568999 - L1Md_F2 LINE L1 -4 6578 5989 1 1699 200 246 18 0 chrX 146081364 146081421 -20568875 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 1 1699 234 243 83 28 chrX 146081464 146081536 -20568760 - B1F SINE Alu -29 120 45 1 1699 242 207 16 65 chrX 146081833 146081895 -20568401 + B4 SINE B4 15 73 -219 1 1699 1916 83 8 4 chrX 146082197 146082464 -20567832 - RLTR1C LTR ERV1 0 503 236 1 1699 705 10 105 48 chrX 146082463 146082568 -20567728 - RLTR1C LTR ERV1 -392 111 1 1 1699 13542 91 48 22 chrX 146082568 146084711 -20565585 - MMVL30-int LTR ERV1 0 3698 1501 1 1699 351 0 0 0 chrX 146084854 146084893 -20565403 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 1699 306 0 0 0 chrX 146084893 146084926 -20565370 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 1699 429 177 30 12 chrX 146085032 146085222 -20565074 - MMVL30-int LTR ERV1 -2115 1184 1021 1 1699 257 101 156 104 chrX 146085232 146085309 -20564987 - MMVL30-int LTR ERV1 -2257 1042 962 1 1699 4505 125 11 4 chrX 146085376 146086109 -20564187 - MMVL30-int LTR ERV1 -2245 1453 716 1 1699 211 213 0 21 chrX 146086438 146086486 -20563810 + (CAGA)n Simple_repeat Simple_repeat 3 49 0 1 1699 2527 184 9 35 chrX 146086529 146087076 -20563220 - MMVL30-int LTR ERV1 -7023 533 1 1 1699 3759 90 2 4 chrX 146087076 146087580 -20562716 - RLTR1C LTR ERV1 0 503 1 1 1699 296 227 15 0 chrX 146087671 146087737 -20562559 + B3 SINE B2 125 191 -25 1 1699 23 0 0 0 chrX 146087972 146087995 -20562301 + AT_rich Low_complexity Low_complexity 1 23 0 1 1699 261 118 0 0 chrX 146088241 146088292 -20562004 + (T)n Simple_repeat Simple_repeat 1 51 0 1 1699 252 337 68 19 chrX 146089497 146089600 -20560696 + PB1D7 SINE Alu 3 110 -10 1 1699 1382 161 30 0 chrX 146089761 146090028 -20560268 + Lx2A1 LINE L1 6733 7007 -1 1 1699 331 281 60 17 chrX 146090094 146090210 -20560086 + ID_B1 SINE B4 9 129 -95 1 1699 1519 239 48 48 chrX 146090210 146090650 -20559646 + Lx LINE L1 6143 6582 -72 1 1699 540 0 0 0 chrX 146090959 146091019 -20559277 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 1699 609 40 0 0 chrX 146091019 146091094 -20559202 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 1699 196 30 0 57 chrX 146091256 146091291 -20559005 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 1 1699 293 288 0 0 chrX 146091326 146091392 -20558904 - ID2 SINE ID -17 66 1 1 1699 499 299 120 5 chrX 146091424 146091616 -20558680 - ID_B1 SINE B4 -9 215 2 1 1699 627 339 12 6 chrX 146092751 146092923 -20557373 + ID_B1 SINE B4 6 178 -46 1 1699 229 200 0 0 chrX 146093260 146093300 -20556996 + GA-rich Low_complexity Low_complexity 3 42 0 1 1699 1254 99 22 11 chrX 146094956 146095140 -20555156 - B2_Mm2 SINE B2 -9 186 1 1 1699 367 149 15 0 chrX 146095188 146095255 -20555041 - U3 snRNA snRNA -149 68 1 1 1699 192 241 0 0 chrX 146095556 146095635 -20554661 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 1699 524 336 24 8 chrX 146095731 146095977 -20554319 - Lx9 LINE L1 -1067 6577 6328 1 1699 7984 117 5 1 chrX 146095997 146098008 -20552288 + L1_Mus1 LINE L1 4547 6564 -3 1 1699 32158 45 17 5 chrX 146098132 146103262 -20547034 + L1Md_Gf LINE L1 243 5531 -355 1 1699 9266 32 0 0 chrX 146103263 146104386 -20545910 - MERVL-int LTR ERVL -672 4813 3691 1 1699 416 119 99 0 chrX 146104386 146104460 -20545836 + L1Md_F2 LINE L1 5496 5586 -297 1 1699 7793 57 5 3 chrX 146104460 146105454 -20544842 + L1Md_F2 LINE L1 5587 6582 0 1 1699 8525 124 1 4 chrX 146105454 146106817 -20543479 - L1_Mm LINE L1 -199 5684 4326 1 1699 2814 171 26 54 chrX 146106805 146107485 -20542811 - L1_Mur1 LINE L1 -2823 3063 2403 1 1699 1060 171 22 8 chrX 146107483 146107801 -20542495 - L1_Mur1 LINE L1 -4496 1390 1068 1 1699 1657 196 87 143 chrX 146107801 146108319 -20541977 + RMER19B LTR ERVK 1 489 -413 1 1699 312 287 83 118 chrX 146108829 146109058 -20541238 - MLT2B5 LTR ERVL -261 340 120 1 1699 525 307 45 40 chrX 146108927 146109127 -20541169 - MTEa LTR MaLR -157 222 22 1 1699 191 329 23 58 chrX 146109535 146109622 -20540674 + MIRm SINE MIR 85 168 -108 1 1699 242 344 21 11 chrX 146109781 146109875 -20540421 + MLT1H1 LTR MaLR 159 253 -326 1 1699 290 393 49 0 chrX 146109930 146110052 -20540244 + MLT1H1 LTR MaLR 315 442 -113 1 1699 4131 151 31 2 chrX 146110238 146111158 -20539138 - Lx5 LINE L1 -1062 5988 5024 1 1699 492 62 0 0 chrX 146111159 146111223 -20539073 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 1699 4028 217 58 6 chrX 146111227 146112085 -20538211 + Lx5 LINE L1 6148 7050 0 2 1699 290 326 30 13 chrX 146112251 146112361 -20537935 + B1F1 SINE Alu 7 115 -2 2 1699 1751 132 42 3 chrX 146112529 146112789 -20537507 - L1_Mus3 LINE L1 -1 6637 6367 2 1699 189 0 0 0 chrX 146112789 146112810 -20537486 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2 1699 1751 132 42 3 chrX 146112810 146112838 -20537458 - L1_Mus3 LINE L1 -272 6366 6339 2 1699 1355 180 0 0 chrX 146112841 146113074 -20537222 + L1_Mm LINE L1 5411 5643 -240 2 1699 340 233 158 0 chrX 146113076 146113196 -20537100 + B3 SINE B2 53 191 -25 2 1699 2428 130 136 36 chrX 146114278 146114750 -20535546 + MURVY-LTR LTR ERV1 1 519 0 2 1699 10801 294 51 48 chrX 146114750 146120164 -20530132 + RLTR6-int LTR ERV1 3 5646 -2132 2 1699 2678 131 90 33 chrX 146120454 146120943 -20529353 + MURVY-LTR LTR ERV1 1 517 -2 2 1699 755 150 6 0 chrX 146121113 146121286 -20529010 + (TG)n Simple_repeat Simple_repeat 1 174 0 2 1699 296 296 8 25 chrX 146121466 146121584 -20528712 + PB1D9 SINE Alu 5 120 0 2 1699 257 364 18 36 chrX 146122068 146122236 -20528060 - B4 SINE B4 -18 274 110 2 1699 364 331 14 27 chrX 146122354 146122500 -20527796 - RSINE1 SINE B4 -19 146 3 2 1699 5528 81 5 7 chrX 146123085 146123834 -20526462 + L1Md_F2 LINE L1 5835 6582 0 2 1699 331 0 0 0 chrX 146124406 146124446 -20525850 - RLTR1C LTR ERV1 0 503 464 2 1699 291 350 8 16 chrX 146124439 146124561 -20525735 + B1F SINE Alu 29 149 0 2 1699 548 283 140 43 chrX 146124604 146124811 -20525485 + Lx5 LINE L1 6480 6706 -344 2 1699 5280 102 14 16 chrX 146125083 146125844 -20524452 - L1_Mus1 LINE L1 -1 6566 5807 2 1699 3004 119 2 8 chrX 146126106 146126656 -20523640 - L1_Mus3 LINE L1 -684 5954 5407 2 1699 1955 120 7 10 chrX 146126656 146126958 -20523338 + L1_Mus3 LINE L1 6338 6638 0 2 1699 256 327 18 27 chrX 146127110 146127220 -20523076 - PB1D10 SINE Alu -2 115 7 2 1699 3189 217 71 6 chrX 146127385 146128075 -20522221 - Lx5 LINE L1 0 7050 6316 2 1699 290 331 75 23 chrX 146128111 146128244 -20522052 - MLT1L LTR MaLR -160 450 311 2 1699 330 275 107 8 chrX 146128583 146128704 -20521592 - ID_B1 SINE B4 -91 133 1 2 1699 775 307 12 4 chrX 146128748 146129003 -20521293 - Lx7 LINE L1 -396 7300 7044 2 1699 236 296 28 75 chrX 146129789 146129895 -20520401 + MER5A DNA MER1_type 80 180 -9 2 1699 1131 89 0 0 chrX 146129957 146130103 -20520193 + B1_Mm SINE Alu 2 147 0 2 1699 500 260 32 0 chrX 146130233 146130356 -20519940 + B1F1 SINE Alu 6 132 -17 2 1699 315 0 0 0 chrX 146130365 146130400 -20519896 + (ATTG)n Simple_repeat Simple_repeat 2 36 0 2 1699 614 238 7 7 chrX 146130761 146130905 -20519391 + B1_Mur3 SINE Alu 6 149 0 2 1699 240 348 0 71 chrX 146131001 146131100 -20519196 + PB1D10 SINE Alu 24 115 -2 2 1699 296 336 8 15 chrX 146131126 146131259 -20519037 + L1MC2 LINE L1 6100 6231 -113 2 1699 484 82 141 0 chrX 146131380 146131465 -20518831 - RMER19A LTR ERVK 0 737 641 2 1699 251 130 19 0 chrX 146131498 146131552 -20518744 + (TTAA)n Simple_repeat Simple_repeat 2 56 0 2 1699 40120 31 1 7 chrX 146131564 146137045 -20513251 + L1Md_A LINE L1 441 5883 0 2 1699 2107 137 42 127 chrX 146137072 146137591 -20512705 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1699 6240 39 5 12 chrX 146137593 146138342 -20511954 - IAPEz-int LTR ERVK -2 6479 5736 2 1699 2075 68 45 0 chrX 146138341 146138607 -20511689 - IAPEz-int LTR ERVK -4845 1636 1359 2 1699 4275 83 21 49 chrX 146138607 146139356 -20510940 - IAPEz-int LTR ERVK -5819 662 10 2 1699 1288 108 25 0 chrX 146139362 146139566 -20510730 - IAPLTR2_Mm LTR ERVK -265 210 2 2 1699 5644 47 0 0 chrX 146139566 146140245 -20510051 + L1Md_A LINE L1 5904 6582 0 2 1699 2962 38 3 0 chrX 146140309 146140654 -20509642 + ORR1A0 LTR MaLR 1 346 0 2 1699 3521 152 23 2 chrX 146140658 146141266 -20509030 - RMER19A LTR ERVK -116 621 1 2 1699 362 278 41 0 chrX 146141330 146141427 -20508869 + B4A SINE B4 1 101 -191 2 1699 446 293 63 35 chrX 146141542 146141858 -20508438 + L1MB8 LINE L1 5805 6133 -41 2 1699 3377 41 2 0 chrX 146141860 146142253 -20508043 - MTA_Mm LTR MaLR 0 396 3 2 1699 510 295 0 0 chrX 146142257 146142396 -20507900 + ID_B1 SINE B4 86 224 0 2 1699 556 274 208 22 chrX 146142761 146143030 -20507266 + Lx8 LINE L1 7121 7439 -34 2 1699 1763 197 25 11 chrX 146143287 146143647 -20506649 - ORR1B2 LTR MaLR -2 365 1 2 1699 3711 186 55 82 chrX 146143810 146144737 -20505559 + RMER19B LTR ERVK 1 902 0 2 1700 403 244 17 42 chrX 146146141 146146261 -20504035 - ID_B1 SINE B4 -4 220 104 2 1700 261 336 28 21 chrX 146146261 146146278 -20504018 - B1F SINE Alu 0 118 6 2 1700 861 307 0 0 chrX 146146860 146147088 -20503208 + MTEa LTR MaLR 24 251 -128 2 1700 613 145 7 101 chrX 146147150 146147288 -20503008 - URR1B DNA MER1_type -100 125 1 2 1700 673 165 91 6 chrX 146147763 146147928 -20502368 + Lx9 LINE L1 7464 7642 -2 2 1700 793 250 50 10 chrX 146148165 146148367 -20501929 + B3 SINE B2 1 210 -6 2 1700 291 308 82 15 chrX 146148406 146148541 -20501755 + ID_B1 SINE B4 73 216 -8 2 1700 585 83 0 0 chrX 146148555 146148639 -20501657 + (GA)n Simple_repeat Simple_repeat 1 84 0 2 1700 432 51 0 0 chrX 146148750 146148809 -20501487 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1700 281 288 0 59 chrX 146149403 146149488 -20500808 + ID4_ SINE ID 2 81 -2 2 1700 782 188 7 0 chrX 146149538 146149676 -20500620 + B1_Mur4 SINE Alu 5 143 -7 2 1700 331 299 148 30 chrX 146150135 146150677 -20499619 + Charlie2a DNA MER1_type 1893 2498 -363 2 1700 4774 94 9 1 chrX 146152564 146153234 -20497062 + L1_Mus3 LINE L1 5959 6633 -5 2 1700 32814 81 2 3 chrX 146153242 146158477 -20491819 + L1Md_F2 LINE L1 266 5589 -297 2 1700 8117 49 3 2 chrX 146158477 146159470 -20490826 + L1Md_F2 LINE L1 5590 6583 -2 2 1700 21 36 0 0 chrX 146159709 146159737 -20490559 + AT_rich Low_complexity Low_complexity 1 28 0 2 1700 519 111 37 0 chrX 146159740 146159821 -20490475 + RMER17D LTR ERVK 1 84 -805 2 1700 784 174 11 48 chrX 146159813 146160084 -20490212 + RMER17D LTR ERVK 292 552 -337 2 1700 225 0 0 0 chrX 146160084 146160109 -20490187 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1700 2795 75 0 3 chrX 146160466 146160826 -20489470 - L1_Mus1 LINE L1 0 6567 6209 2 1700 2020 129 9 9 chrX 146160826 146161169 -20489127 + RMER17D LTR ERVK 547 889 0 2 1700 454 126 0 11 chrX 146161169 146161257 -20489039 - Lx LINE L1 -12 6642 6556 2 1700 441 156 0 0 chrX 146161640 146161717 -20488579 + (CCCA)n Simple_repeat Simple_repeat 3 79 0 2 1700 210 365 50 6 chrX 146161717 146161877 -20488419 - L2a LINE L2 0 3426 3260 2 1700 553 286 61 0 chrX 146164759 146164955 -20485341 - L1MC1 LINE L1 -163 6170 5963 2 1700 195 69 0 0 chrX 146164967 146164996 -20485300 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1700 21 89 0 0 chrX 146165729 146165785 -20484511 + AT_rich Low_complexity Low_complexity 1 56 0 2 1700 188 35 35 0 chrX 146165818 146165847 -20484449 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2 1700 254 284 0 0 chrX 146166496 146166570 -20483726 + PB1D10 SINE Alu 42 115 -2 2 1700 5737 104 32 5 chrX 146166714 146168325 -20481971 - L1VL2 LINE L1 -1789 1826 172 2 1700 274 286 28 23 chrX 146168322 146168449 -20481847 - L1MC1 LINE L1 -390 5954 5836 2 1700 219 127 77 31 chrX 146168459 146168524 -20481772 + T-rich Low_complexity Low_complexity 5 72 0 2 1700 294 329 0 0 chrX 146168525 146168604 -20481692 - ID4_ SINE ID -2 81 3 2 1700 224 111 0 82 chrX 146168795 146168844 -20481452 + A-rich Low_complexity Low_complexity 2 46 0 2 1700 390 240 23 62 chrX 146168923 146169052 -20481244 - L1MCa LINE L1 -5875 633 510 2 1700 343 253 10 40 chrX 146169235 146169334 -20480962 - PB1 SINE Alu -3 124 29 2 1700 617 291 87 19 chrX 146169418 146169684 -20480612 - L1MCa LINE L1 -6220 288 5 2 1700 474 223 105 23 chrX 146169911 146170044 -20480252 - B1F2 SINE Alu 0 149 6 2 1700 341 252 40 0 chrX 146170185 146170284 -20480012 + MER53 DNA hAT 91 193 0 2 1700 193 344 11 32 chrX 146170351 146170444 -20479852 + MER5A DNA MER1_type 1 91 -98 2 1700 552 77 0 0 chrX 146170471 146170549 -20479747 + (TCCC)n Simple_repeat Simple_repeat 3 80 0 2 1700 284 102 0 20 chrX 146170600 146170650 -20479646 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 2 1700 366 329 20 41 chrX 146170740 146170886 -20479410 + LTR16A1 LTR ERVL 47 189 -267 2 1700 186 103 0 0 chrX 146170901 146170930 -20479366 + (TCTCCC)n Simple_repeat Simple_repeat 1 29 0 2 1700 1180 235 84 71 chrX 146171150 146171197 -20479099 + ORR1D1 LTR MaLR 1 46 -328 2 1700 1207 58 0 0 chrX 146171197 146171335 -20478961 + B1_Mus1 SINE Alu 3 140 -8 2 1700 190 29 88 0 chrX 146171336 146171370 -20478926 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 2 1700 1180 235 84 71 chrX 146171370 146171563 -20478733 + ORR1D1 LTR MaLR 47 231 -143 2 1700 186 71 0 0 chrX 146171563 146171591 -20478705 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 2 1700 1180 235 84 71 chrX 146171591 146171714 -20478582 + ORR1D1 LTR MaLR 232 371 -3 2 1700 1907 137 0 45 chrX 146171954 146172267 -20478029 + Lx3B LINE L1 6672 6970 -3 2 1700 22 0 0 0 chrX 146172274 146172296 -20478000 + AT_rich Low_complexity Low_complexity 1 22 0 2 1700 324 279 0 0 chrX 146172557 146172625 -20477671 + B1F SINE Alu 21 88 -61 2 1700 666 199 21 35 chrX 146172754 146172895 -20477401 + B1_Mur3 SINE Alu 5 143 -6 2 1700 422 298 20 66 chrX 146172940 146173091 -20477205 + RSINE1 SINE B4 5 148 -17 2 1700 477 0 0 0 chrX 146173102 146173155 -20477141 + (TAAA)n Simple_repeat Simple_repeat 4 56 0 2 1700 1688 255 65 12 chrX 146173181 146173610 -20476686 - Lx6 LINE L1 -179 7281 6830 2 1700 839 276 39 0 chrX 146173926 146174129 -20476167 - ID_B1 SINE B4 -12 212 2 2 1700 2527 146 17 7 chrX 146174180 146174587 -20475709 + Lx2A LINE L1 6589 6999 -9 2 1700 324 70 0 0 chrX 146174587 146174630 -20475666 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2 1700 455 273 75 62 chrX 146174661 146174821 -20475475 + B3A SINE B2 48 209 -7 2 1700 2020 177 34 13 chrX 146174826 146175204 -20475092 - ORR1B1 LTR MaLR -8 386 1 2 1700 419 250 39 71 chrX 146175209 146175364 -20474932 + B3 SINE B2 60 209 -7 3 1700 202 91 67 22 chrX 146176350 146176395 -20473901 + A-rich Low_complexity Low_complexity 3 49 0 3 1700 260 184 102 0 chrX 146176524 146176573 -20473723 - ID_B1 SINE B4 -17 207 154 3 1700 266 303 36 28 chrX 146176746 146176847 -20473449 + B1F1 SINE Alu 19 118 -2 3 1700 441 252 210 8 chrX 146176851 146176975 -20473321 + B3 SINE B2 3 151 -65 3 1700 6361 15 0 0 chrX 146177116 146177829 -20472467 - L1_Mm LINE L1 -195 5688 4976 3 1700 1236 35 0 0 chrX 146177830 146177975 -20472321 + L1Md_A LINE L1 6436 6580 -2 3 1700 537 158 0 0 chrX 146178161 146178262 -20472034 + (TCTA)n Simple_repeat Simple_repeat 1 101 0 3 1700 862 252 19 15 chrX 146178276 146178481 -20471815 - ID_B1 SINE B4 -17 207 2 3 1700 183 42 0 0 chrX 146178573 146178597 -20471699 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 3 1700 343 327 67 97 chrX 146178689 146179072 -20471224 - ORR1E LTR MaLR 0 370 1 3 1700 511 326 0 7 chrX 146179203 146179351 -20470945 + B1F1 SINE Alu 1 147 -2 3 1700 344 305 18 37 chrX 146179489 146179598 -20470698 + B3A SINE B2 1 107 -91 3 1700 28 0 0 0 chrX 146179623 146179651 -20470645 + AT_rich Low_complexity Low_complexity 1 28 0 3 1700 654 322 21 38 chrX 146179687 146180074 -20470222 + B4A SINE B4 2 267 -25 3 1700 254 207 0 79 chrX 146180114 146180177 -20470119 + B4A SINE B4 235 292 0 3 1700 299 254 14 14 chrX 146180384 146180456 -20469840 - ID4 SINE ID -9 74 3 3 1700 277 295 95 35 chrX 146180471 146180587 -20469709 + MER58B DNA MER1_type 172 294 -47 3 1700 382 336 24 8 chrX 146180999 146181122 -20469174 - B4A SINE B4 -166 126 2 3 1700 284 299 0 16 chrX 146181662 146181758 -20468538 + ID4 SINE ID 9 102 -50 3 1700 775 174 15 8 chrX 146181938 146182071 -20468225 + B1_Mus2 SINE Alu 1 134 -13 3 1700 721 85 0 30 chrX 146182071 146182205 -20468091 + (CAGAGA)n Simple_repeat Simple_repeat 1 130 0 3 1700 217 246 0 21 chrX 146182258 146182310 -20467986 + B3 SINE B2 1 51 -147 3 1700 200 326 21 42 chrX 146182816 146182912 -20467384 - MIRb SINE MIR -50 218 125 3 1700 3147 154 51 51 chrX 146183627 146184670 -20465626 + RLTR13D1 LTR ERVK 1 1023 0 3 1700 478 343 28 5 chrX 146185202 146185419 -20464877 - MLT1E2 LTR MaLR -30 597 376 3 1700 548 14 42 0 chrX 146185655 146185726 -20464570 + (TTTTG)n Simple_repeat Simple_repeat 1 74 0 3 1700 814 178 0 0 chrX 146185726 146185855 -20464441 - B1_Mus1 SINE Alu -13 135 7 3 1700 600 14 0 0 chrX 146185874 146185943 -20464353 + (GGAA)n Simple_repeat Simple_repeat 2 70 0 3 1700 255 250 18 0 chrX 146185979 146186035 -20464261 + ID4_ SINE ID 24 80 -3 3 1700 260 250 0 0 chrX 146186035 146186087 -20464209 + polypurine Low_complexity Low_complexity 1 52 0 3 1700 836 298 19 0 chrX 146186387 146186595 -20463701 + ID_B1 SINE B4 3 214 -10 3 1700 237 262 93 23 chrX 146186720 146186806 -20463490 - B1F2 SINE Alu -49 100 9 3 1700 226 82 19 58 chrX 146187402 146187454 -20462842 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 3 1700 344 296 70 0 chrX 146187454 146187569 -20462727 - ID_B1 SINE B4 0 224 102 3 1700 236 284 105 26 chrX 146187928 146188004 -20462292 + ID4 SINE ID 2 83 0 3 1700 216 352 95 8 chrX 146188004 146188054 -20462242 + ID_B1 SINE B4 2 138 -86 3 1700 250 212 30 0 chrX 146188525 146188591 -20461705 + (TCTCTG)n Simple_repeat Simple_repeat 5 72 0 3 1700 204 182 0 0 chrX 146188601 146188645 -20461651 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 3 1700 263 287 245 0 chrX 146188702 146188796 -20461500 - B3A SINE B2 -80 118 2 3 1700 189 0 0 0 chrX 146189083 146189104 -20461192 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3 1700 236 290 53 92 chrX 146189479 146189555 -20460741 + RSINE1 SINE B4 92 164 -1 3 1700 606 83 0 0 chrX 146189613 146189697 -20460599 - BC1_Mm scRNA scRNA -56 96 13 3 1700 264 40 0 39 chrX 146189697 146189749 -20460547 + L1_Mus2 LINE L1 6526 6580 -2 3 1700 8970 12 0 0 chrX 146189799 146191055 -20459241 - L1Md_A LINE L1 0 6582 5327 3 1700 587 301 195 17 chrX 146191230 146191522 -20458774 + MTE2a LTR MaLR 1 344 -35 3 1700 190 27 51 51 chrX 146191522 146191561 -20458735 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 3 1700 1070 132 0 0 chrX 146191562 146191706 -20458590 - B1_Mus2 SINE Alu -3 144 1 3 1700 254 281 18 0 chrX 146192023 146192080 -20458216 - PB1D10 SINE Alu -37 80 23 3 1700 363 44 0 0 chrX 146192088 146192133 -20458163 + (CCCTG)n Simple_repeat Simple_repeat 2 46 0 3 1700 546 133 0 0 chrX 146192303 146192393 -20457903 + (TC)n Simple_repeat Simple_repeat 2 91 0 3 1700 4151 73 2 2 chrX 146192409 146192917 -20457379 - L1_Mus1 LINE L1 -2 6565 6058 3 1700 539 261 280 17 chrX 146192917 146193084 -20457212 - ID_B1 SINE B4 -10 214 2 3 1700 26 0 0 0 chrX 146193446 146193472 -20456824 + AT_rich Low_complexity Low_complexity 1 26 0 3 1700 379 247 0 12 chrX 146193590 146193672 -20456624 + MER20 DNA MER1_type 121 201 -18 3 1700 1073 47 18 85 chrX 146194057 146194221 -20456075 - B2_Mm2 SINE B2 -7 188 36 3 1700 240 315 27 0 chrX 146194218 146194291 -20456005 - B4A SINE B4 -217 75 1 3 1700 272 288 39 85 chrX 146194341 146194470 -20455826 - RSINE1 SINE B4 -31 134 12 3 1700 470 289 35 21 chrX 146194465 146194610 -20455686 - ID_B1 SINE B4 -77 147 1 3 1700 235 275 93 53 chrX 146195388 146195538 -20454758 - L1MC LINE L1 -2118 5764 5609 3 1700 264 370 79 0 chrX 146195906 146196033 -20454263 + MER5A DNA MER1_type 8 144 -45 3 1700 358 272 9 81 chrX 146196177 146196309 -20453987 - B3A SINE B2 -5 193 70 3 1700 265 305 153 23 chrX 146196344 146196475 -20453821 - B1F2 SINE Alu 0 149 2 3 1700 681 162 2 10 chrX 146196512 146196644 -20453652 - L1_Mur2 LINE L1 -2202 3944 3778 3 1700 236 239 71 43 chrX 146196879 146196949 -20453347 + ID4_ SINE ID 9 80 -3 3 1700 229 337 133 0 chrX 146197025 146197123 -20453173 + B1F1 SINE Alu 1 111 -38 3 1700 265 273 44 35 chrX 146197186 146197300 -20452996 + PB1D10 SINE Alu 2 116 -1 3 1700 296 83 0 20 chrX 146197682 146197731 -20452565 + (TTG)n Simple_repeat Simple_repeat 3 50 0 3 1700 429 42 27 14 chrX 146198285 146198358 -20451938 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 3 1700 303 252 58 48 chrX 146198439 146198543 -20451753 - B4A SINE B4 -182 110 6 3 1700 6133 78 30 32 chrX 146199572 146200385 -20449911 - L1Md_F2 LINE L1 -13 6569 5759 3 1700 2974 120 87 44 chrX 146201147 146201643 -20448653 + MURVY-LTR LTR ERV1 1 517 -2 3 1700 365 304 45 62 chrX 146201695 146201937 -20448359 + MuRRS4-int LTR ERV1 31 268 -7510 3 1700 4433 299 34 29 chrX 146201984 146203786 -20446510 + MuRRS4-int LTR ERV1 343 2292 -5264 3 1700 2772 305 5 11 chrX 146203833 146204712 -20445584 + MuRRS4-int LTR ERV1 2367 3239 -1451 3 1700 213 260 0 20 chrX 146204742 146204793 -20445503 - ID SINE ID -153 71 22 3 1700 346 358 23 41 chrX 146205279 146205451 -20444845 - B4 SINE B4 -14 278 110 3 1700 294 373 14 27 chrX 146205524 146205670 -20444626 - RSINE1 SINE B4 -19 146 3 3 1700 243 320 67 19 chrX 146206289 146206394 -20443902 - ID_B1 SINE B4 -7 217 108 3 1700 241 162 0 0 chrX 146206532 146206569 -20443727 + B4 SINE B4 38 74 -218 3 1700 504 281 108 28 chrX 146206900 146207076 -20443220 + B3 SINE B2 24 213 -3 3 1700 259 289 8 24 chrX 146208297 146208345 -20441951 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1700 747 62 0 0 chrX 146208345 146208442 -20441854 + (TC)n Simple_repeat Simple_repeat 2 98 0 3 1700 285 209 6 17 chrX 146208442 146208549 -20441747 + (TG)n Simple_repeat Simple_repeat 1 105 0 3 1700 360 271 0 63 chrX 146208712 146208838 -20441458 + PB1D9 SINE Alu 2 119 -1 3 1700 8833 63 5 3 chrX 146208979 146210831 -20439465 - L1Md_F2 LINE L1 -1 6581 4725 3 1700 326 319 30 48 chrX 146211464 146211632 -20438664 - B4 SINE B4 -18 274 110 3 1700 353 359 14 27 chrX 146211704 146211850 -20438446 - RSINE1 SINE B4 -19 146 3 3 1700 225 228 18 0 chrX 146212172 146212229 -20438067 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 3 1700 229 394 54 16 chrX 146212425 146212554 -20437742 - ID_B1 SINE B4 -7 217 84 3 1700 217 241 16 65 chrX 146212641 146212703 -20437593 + B4 SINE B4 15 73 -219 3 1700 3923 92 2 14 chrX 146213006 146213515 -20436781 - RLTR1C LTR ERV1 0 503 1 3 1700 505 276 109 29 chrX 146213547 146213722 -20436574 + B3 SINE B2 24 212 -4 3 1700 354 23 0 0 chrX 146214929 146214972 -20435324 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1700 492 18 0 0 chrX 146214972 146215028 -20435268 + (GA)n Simple_repeat Simple_repeat 1 57 0 3 1700 317 175 10 0 chrX 146215032 146215135 -20435161 + (TG)n Simple_repeat Simple_repeat 1 104 0 3 1700 423 252 0 56 chrX 146215325 146215451 -20434845 + PB1D9 SINE Alu 2 120 0 3 1700 189 0 0 0 chrX 146215613 146215634 -20434662 + (TA)n Simple_repeat Simple_repeat 2 22 0 3 1700 287 373 14 27 chrX 146216503 146216649 -20433647 - RSINE1 SINE B4 -19 146 3 3 1700 234 325 12 0 chrX 146216661 146216744 -20433552 - B4 SINE B4 -207 85 2 3 1700 219 194 0 0 chrX 146217482 146217518 -20432778 + B4 SINE B4 38 73 -219 3 1700 3589 109 16 14 chrX 146217822 146218324 -20431972 - RLTR1C LTR ERV1 0 503 1 3 1700 326 271 156 40 chrX 146218486 146218659 -20431637 + B3 SINE B2 24 216 0 3 1700 315 165 0 0 chrX 146219855 146219940 -20430356 + (TG)n Simple_repeat Simple_repeat 2 86 0 4 1700 209 250 0 38 chrX 146219958 146220037 -20430259 + (TG)n Simple_repeat Simple_repeat 1 76 0 4 1700 319 291 0 57 chrX 146220198 146220322 -20429974 + PB1D9 SINE Alu 2 118 -2 4 1700 271 357 51 34 chrX 146221109 146221286 -20429010 - B4 SINE B4 -3 289 110 4 1700 292 358 32 32 chrX 146221349 146221505 -20428791 - RSINE1 SINE B4 -7 158 3 4 1700 219 282 14 0 chrX 146221525 146221596 -20428700 - B4 SINE B4 -216 76 5 4 1700 180 0 0 0 chrX 146221610 146221630 -20428666 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1700 241 304 76 29 chrX 146222133 146222238 -20428058 - ID_B1 SINE B4 -7 217 108 4 1700 244 207 16 65 chrX 146222352 146222414 -20427882 + B4 SINE B4 15 73 -219 4 1700 3575 100 4 8 chrX 146222718 146223222 -20427074 - RLTR1C LTR ERV1 0 503 2 4 1700 516 259 109 29 chrX 146223256 146223431 -20426865 + B3 SINE B2 24 212 -4 4 1700 413 141 10 0 chrX 146225492 146225591 -20424705 + (TG)n Simple_repeat Simple_repeat 1 100 0 4 1700 279 327 0 27 chrX 146225817 146225927 -20424369 + PB1D9 SINE Alu 2 108 -12 4 1700 243 0 0 0 chrX 146225930 146225957 -20424339 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1700 180 0 0 0 chrX 146226413 146226433 -20423863 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1700 229 330 48 0 chrX 146227626 146227729 -20422567 + PB1D7 SINE Alu 3 110 -10 4 1700 1359 159 31 0 chrX 146227890 146228148 -20422148 + Lx2A1 LINE L1 6733 6998 -10 4 1700 216 0 0 0 chrX 146228148 146228172 -20422124 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1700 266 288 0 27 chrX 146228224 146228299 -20421997 + tRNA-Ala-GCY_ tRNA tRNA 3 75 0 4 1700 349 244 3 21 chrX 146228299 146228310 -20421986 + ID SINE ID 9 88 -204 4 1700 1973 214 49 37 chrX 146228331 146228840 -20421456 + Lx LINE L1 6134 6648 -6 4 1700 2263 175 8 32 chrX 146228833 146229010 -20421286 + L1_Mm LINE L1 5287 5461 -422 4 1700 1163 122 69 18 chrX 146229010 146229227 -20421069 + L1_Mus3 LINE L1 6407 6634 -4 4 1700 2263 175 8 32 chrX 146229227 146229522 -20420774 + L1_Mm LINE L1 5462 5748 -135 4 1700 1805 151 23 3 chrX 146229515 146229860 -20420436 - L1_Mur2 LINE L1 -576 5301 4950 4 1700 217 279 0 29 chrX 146230223 146230293 -20420003 + (TATG)n Simple_repeat Simple_repeat 3 70 0 4 1700 531 314 7 149 chrX 146230343 146230405 -20419891 - B4 SINE B4 -26 266 217 4 1700 234 0 0 0 chrX 146230405 146230431 -20419865 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1700 531 314 7 149 chrX 146230431 146230588 -20419708 - B4 SINE B4 -76 216 77 4 1700 316 331 98 33 chrX 146230588 146230741 -20419555 - RSINE1 SINE B4 0 165 3 4 1700 531 314 7 149 chrX 146230741 146230816 -20419480 - B4 SINE B4 -216 76 13 4 1700 3677 253 30 28 chrX 146231263 146232542 -20417754 - Lx9 LINE L1 -22 7622 6341 4 1700 873 134 0 0 chrX 146232543 146232692 -20417604 + (TA)n Simple_repeat Simple_repeat 2 150 0 4 1700 776 250 18 65 chrX 146232830 146233170 -20417126 - Lx9 LINE L1 -1604 6040 5712 4 1700 315 228 0 0 chrX 146233148 146233227 -20417069 - L1_Rod LINE L1 -1525 4322 4244 4 1700 522 273 146 4 chrX 146233476 146233715 -20416581 + Lx8 LINE L1 7196 7468 -5 4 1700 282 286 91 45 chrX 146233744 146233832 -20416464 + B3A SINE B2 25 116 -82 4 1700 270 0 0 0 chrX 146233883 146233913 -20416383 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1700 380 335 9 36 chrX 146235127 146235267 -20415029 - B1F SINE Alu -1 148 13 4 1700 582 306 61 1 chrX 146235595 146235768 -20414528 + B3A SINE B2 2 188 -28 4 1700 351 44 0 0 chrX 146235768 146235813 -20414483 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1700 578 312 82 10 chrX 146235813 146235833 -20414463 + B3 SINE B2 189 208 -8 4 1700 329 323 142 69 chrX 146236038 146236271 -20414025 + B4A SINE B4 14 263 -29 4 1700 501 17 0 0 chrX 146236310 146236368 -20413928 + (TC)n Simple_repeat Simple_repeat 2 59 0 4 1700 348 43 0 0 chrX 146236370 146236416 -20413880 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1700 203 161 17 35 chrX 146236576 146236634 -20413662 + (GTTTG)n Simple_repeat Simple_repeat 3 59 0 4 1700 221 310 0 0 chrX 146236642 146236700 -20413596 - ID4_ SINE ID -17 66 9 4 1700 393 347 104 0 chrX 146236783 146236927 -20413369 - ID_B1 SINE B4 -64 160 2 4 1700 216 289 0 0 chrX 146237474 146237526 -20412770 - ID4_ SINE ID -26 57 6 4 1700 661 318 57 5 chrX 146238083 146238276 -20412020 + ID_B1 SINE B4 6 208 -16 4 1700 218 200 0 0 chrX 146238590 146238630 -20411666 + GA-rich Low_complexity Low_complexity 3 42 0 4 1700 404 147 0 0 chrX 146239779 146239847 -20410449 - U3 snRNA snRNA -149 68 1 4 1700 288 260 0 0 chrX 146240150 146240227 -20410069 + (TG)n Simple_repeat Simple_repeat 2 78 0 4 1700 604 323 34 24 chrX 146240308 146240600 -20409696 - Lx9 LINE L1 -1067 6577 6283 4 1700 5933 134 27 17 chrX 146240600 146241769 -20408527 - Lx LINE L1 -1 6653 5476 4 1700 851 123 89 0 chrX 146241767 146241946 -20408350 - MusHAL1 LINE L1 -444 2268 2074 4 1700 1092 106 0 0 chrX 146241947 146242108 -20408188 + (TTTC)n Simple_repeat Simple_repeat 2 162 0 4 1700 6583 97 12 3 chrX 146242597 146243577 -20406719 - L1Md_F2 LINE L1 -1 6581 5593 4 1700 11767 86 19 3 chrX 146243576 146246134 -20404162 - L1Md_F LINE L1 -2898 2985 387 4 1700 6053 111 72 9 chrX 146246136 146247280 -20403016 - MusHAL1 LINE L1 -1449 1263 48 4 1700 2385 103 102 76 chrX 146247280 146247743 -20402553 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1700 366 191 9 0 chrX 146247743 146247755 -20402541 - L1Md_A LINE L1 -5475 1249 1237 4 1700 6478 36 5 0 chrX 146247768 146248576 -20401720 - IAPEz-int LTR ERVK -17 6464 5653 4 1700 2517 64 0 9 chrX 146248571 146248916 -20401380 - IAPEz-int LTR ERVK -4781 1700 1359 4 1700 3632 57 8 18 chrX 146248916 146249416 -20400880 - IAPEz-int LTR ERVK -5819 662 168 4 1700 248 309 0 0 chrX 146249416 146249471 -20400825 - RLTR27 LTR ERVK -34 275 221 4 1700 801 129 32 91 chrX 146249471 146249658 -20400638 - IAPEz-int LTR ERVK -6288 193 18 4 1700 311 74 0 0 chrX 146249672 146249726 -20400570 - IAPEz-int LTR ERVK -1931 56 3 4 1700 2377 105 102 76 chrX 146249728 146250191 -20400105 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1700 3604 41 9 0 chrX 146250193 146250656 -20399640 - IAPEz-int LTR ERVK -2 6479 6013 4 1700 1873 128 191 25 chrX 146250656 146251048 -20399248 - IAPLTR2_Mm LTR ERVK -18 457 1 4 1700 3213 192 79 20 chrX 146251048 146251883 -20398413 - L1VL2 LINE L1 -5379 956 73 4 1700 297 289 12 12 chrX 146252264 146252353 -20397943 + B3A SINE B2 1 89 -127 4 1700 241 353 48 62 chrX 146252353 146252409 -20397887 + ID_B1 SINE B4 1 143 -81 4 1700 223 224 143 13 chrX 146252882 146252959 -20397337 + MIR3 SINE MIR 85 171 -37 4 1700 473 341 29 0 chrX 146254998 146255203 -20395093 - MLT1E2 LTR MaLR -30 597 387 4 1700 818 204 0 14 chrX 146255466 146255610 -20394686 - B1_Mus1 SINE Alu 0 148 7 4 1700 645 105 0 0 chrX 146255628 146255723 -20394573 + (GGGA)n Simple_repeat Simple_repeat 2 96 0 4 1700 239 226 0 19 chrX 146255812 146255866 -20394430 + GA-rich Low_complexity Low_complexity 4 56 0 4 1700 742 311 29 0 chrX 146256152 146256358 -20393938 + ID_B1 SINE B4 3 214 -10 4 1700 227 303 39 48 chrX 146256464 146256485 -20393811 - ID_B1 SINE B4 -32 192 90 4 1700 251 301 36 0 chrX 146256485 146256568 -20393728 - PB1D10 SINE Alu -23 94 9 4 1700 244 337 61 0 chrX 146256622 146256720 -20393576 - B1F SINE Alu -37 112 9 4 1700 238 338 27 0 chrX 146256752 146256826 -20393470 - ID4 SINE ID -4 79 4 4 1700 498 17 0 0 chrX 146257243 146257302 -20392994 + (TTG)n Simple_repeat Simple_repeat 2 60 0 4 1700 376 236 69 52 chrX 146257303 146257385 -20392911 - ID_B1 SINE B4 -4 220 136 4 1700 3271 51 2 0 chrX 146257385 146257780 -20392516 + MTA_Mm LTR MaLR 1 396 0 4 1700 376 236 69 52 chrX 146257780 146257813 -20392483 - ID_B1 SINE B4 -89 135 103 4 1700 233 250 25 0 chrX 146257861 146257941 -20392355 - L1MB7 LINE L1 -56 6128 6047 4 1700 185 273 0 22 chrX 146258708 146258753 -20391543 - L3 LINE CR1 -2290 2199 2156 4 1700 378 239 17 17 chrX 146258780 146258895 -20391401 + (TCTG)n Simple_repeat Simple_repeat 2 116 0 4 1700 244 357 107 0 chrX 146258919 146259031 -20391265 - B3A SINE B2 -22 176 53 4 1700 825 65 0 0 chrX 146259441 146259549 -20390747 + (TG)n Simple_repeat Simple_repeat 2 109 0 4 1700 428 214 45 60 chrX 146260367 146260501 -20389795 - ID_B1 SINE B4 0 224 93 4 1700 225 0 0 0 chrX 146261250 146261275 -20389021 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1700 321 118 0 0 chrX 146261393 146261444 -20388852 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1700 602 111 130 0 chrX 146261469 146261577 -20388719 - BC1_Mm scRNA scRNA -18 134 13 4 1700 40 21 0 0 chrX 146261600 146261647 -20388649 + AT_rich Low_complexity Low_complexity 1 47 0 4 1700 595 297 185 10 chrX 146261872 146262163 -20388133 + MTE2a LTR MaLR 1 342 -37 4 1700 269 0 56 0 chrX 146262163 146262199 -20388097 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 4 1700 915 147 0 0 chrX 146262199 146262335 -20387961 - B1_Mus2 SINE Alu -11 136 1 4 1700 322 239 34 68 chrX 146262232 146262349 -20387947 - RLTR25B LTR ERVK -526 502 390 4 1700 1251 94 0 0 chrX 146262848 146263028 -20387268 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 1700 3673 81 10 4 chrX 146263043 146263551 -20386745 - L1_Mus1 LINE L1 -2 6565 6055 4 1700 570 243 0 14 chrX 146263551 146263715 -20386581 - ID_B1 SINE B4 -18 206 2 4 1700 34 24 0 0 chrX 146264054 146264095 -20386201 + AT_rich Low_complexity Low_complexity 1 41 0 4 1700 250 329 0 12 chrX 146264219 146264302 -20385994 + MER20 DNA MER1_type 121 202 -17 4 1700 902 126 49 120 chrX 146264685 146264906 -20385390 - B2_Mm2 SINE B2 -7 188 1 4 1700 295 288 39 85 chrX 146264956 146265085 -20385211 - RSINE1 SINE B4 -31 134 12 4 1700 484 277 41 28 chrX 146265080 146265225 -20385071 - ID_B1 SINE B4 -77 147 1 4 1700 350 319 67 54 chrX 146266479 146266628 -20383668 + MER5A DNA MER1_type 8 158 -31 4 1700 357 272 9 81 chrX 146266749 146266881 -20383415 - B3A SINE B2 -5 193 70 4 1700 308 297 153 23 chrX 146266916 146267047 -20383249 - B1F2 SINE Alu 0 149 2 4 1700 534 126 53 0 chrX 146267115 146267210 -20383086 - L1_Mur2 LINE L1 -2000 3877 3778 4 1700 235 286 24 94 chrX 146267218 146267303 -20382993 - ID4 SINE ID -2 81 3 4 1700 279 288 14 0 chrX 146267447 146267520 -20382776 + ID4_ SINE ID 7 80 -3 4 1700 445 274 81 0 chrX 146267595 146267719 -20382577 + ID_B1 SINE B4 81 214 -10 5 1700 303 268 26 18 chrX 146267758 146267872 -20382424 + PB1D10 SINE Alu 2 116 -1 5 1700 480 48 0 0 chrX 146267884 146267947 -20382349 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 1700 228 233 33 16 chrX 146268351 146268412 -20381884 + BC1_Mm scRNA scRNA 22 83 -69 5 1700 185 0 125 0 chrX 146268925 146268965 -20381331 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 5 1700 331 231 53 53 chrX 146269034 146269148 -20381148 - B4A SINE B4 -173 119 6 5 1700 245 33 0 0 chrX 146269532 146269562 -20380734 - L1_Mus1 LINE L1 -680 5887 5858 5 1700 914 111 19 0 chrX 146269560 146269722 -20380574 + L1_Mm LINE L1 5254 5418 -465 5 1700 2165 149 26 86 chrX 146269725 146269860 -20380436 - L1_Mur1 LINE L1 -2340 3546 3423 5 1700 1595 128 49 18 chrX 146269860 146270145 -20380151 - Lx LINE L1 -4 6650 6357 5 1700 2165 149 26 86 chrX 146270145 146270545 -20379751 - L1_Mur1 LINE L1 -2464 3422 3043 5 1700 185 59 59 0 chrX 146270564 146270598 -20379698 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 5 1700 4499 76 0 8 chrX 146270609 146271208 -20379088 - L1Md_F2 LINE L1 0 6582 5989 5 1700 234 243 83 28 chrX 146271375 146271447 -20378849 - B1F SINE Alu -29 120 45 5 1700 233 389 55 16 chrX 146271528 146271656 -20378640 - ID_B1 SINE B4 -8 216 84 5 1700 236 207 16 65 chrX 146271744 146271806 -20378490 + B4 SINE B4 15 73 -219 5 1700 1968 68 8 8 chrX 146272108 146272376 -20377920 - RLTR1C LTR ERV1 0 503 236 5 1700 687 20 105 48 chrX 146272375 146272480 -20377816 - RLTR1C LTR ERV1 -392 111 1 5 1700 13656 93 44 22 chrX 146272480 146274630 -20375666 - MMVL30-int LTR ERV1 0 3698 1501 5 1700 225 0 0 0 chrX 146274777 146274802 -20375494 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 1700 456 19 0 0 chrX 146274802 146274854 -20375442 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 1700 528 154 55 125 chrX 146274958 146275237 -20375059 - MMVL30-int LTR ERV1 -2190 1508 960 5 1700 4410 136 5 4 chrX 146275302 146276039 -20374257 - MMVL30-int LTR ERV1 -2245 1453 716 5 1701 2485 182 11 35 chrX 146276460 146277006 -20373290 - MMVL30-int LTR ERV1 -7023 533 1 5 1701 3889 78 2 6 chrX 146277006 146277511 -20372785 - RLTR1C LTR ERV1 0 503 1 5 1701 282 287 11 0 chrX 146277601 146277688 -20372608 + B3 SINE B2 125 212 -4 5 1701 23 0 0 0 chrX 146277922 146277945 -20372351 + AT_rich Low_complexity Low_complexity 1 23 0 5 1701 285 0 21 43 chrX 146278189 146278236 -20372060 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 5 1701 248 369 48 0 chrX 146279440 146279543 -20370753 + PB1D7 SINE Alu 3 110 -10 5 1701 1408 171 35 0 chrX 146279704 146279961 -20370335 + Lx2A1 LINE L1 6733 6998 -10 5 1701 216 0 0 0 chrX 146279961 146279985 -20370311 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1701 314 257 0 14 chrX 146280037 146280108 -20370188 + tRNA-Ala-GCY_ tRNA tRNA 3 72 -3 5 1701 1744 236 47 47 chrX 146280144 146280593 -20369703 + Lx LINE L1 6134 6582 -72 5 1701 546 43 0 0 chrX 146280891 146280960 -20369336 + (TC)n Simple_repeat Simple_repeat 1 69 0 5 1701 234 0 0 0 chrX 146280960 146280985 -20369311 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1701 196 30 0 57 chrX 146281147 146281182 -20369114 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 5 1701 327 243 61 10 chrX 146281185 146281283 -20369013 - BC1_Mm scRNA scRNA -49 103 1 5 1701 591 288 120 5 chrX 146281314 146281506 -20368790 - ID_B1 SINE B4 -9 215 2 5 1701 625 333 12 6 chrX 146282640 146282812 -20367484 + ID_B1 SINE B4 6 178 -46 5 1701 204 225 0 0 chrX 146283149 146283189 -20367107 + GA-rich Low_complexity Low_complexity 3 42 0 5 1701 1340 99 22 11 chrX 146284773 146284957 -20365339 - B2_Mm2 SINE B2 -9 186 1 5 1701 361 149 15 0 chrX 146285005 146285072 -20365224 - U3 snRNA snRNA -149 68 1 5 1701 277 291 0 0 chrX 146285373 146285452 -20364844 + (TG)n Simple_repeat Simple_repeat 2 80 0 5 1701 581 340 24 8 chrX 146285548 146285794 -20364502 - Lx9 LINE L1 -1067 6577 6328 5 1701 8631 114 5 1 chrX 146285814 146287825 -20362471 + L1_Mus1 LINE L1 4547 6564 -3 5 1701 36021 47 0 3 chrX 146287949 146293217 -20357079 + L1Md_T LINE L1 243 5589 -297 5 1701 8956 37 0 0 chrX 146293217 146294212 -20356084 + L1Md_T LINE L1 5590 6584 -1 5 1701 351 186 14 0 chrX 146295567 146295637 -20354659 - U3 snRNA snRNA -146 71 1 5 1701 304 250 0 0 chrX 146295940 146296016 -20354280 + (TG)n Simple_repeat Simple_repeat 1 76 0 5 1701 711 318 42 14 chrX 146296098 146296385 -20353911 - Lx9 LINE L1 -1067 6577 6283 5 1701 16465 130 30 29 chrX 146296385 146297712 -20352584 - Lx LINE L1 -1 6653 5342 5 1701 995 16 0 8 chrX 146297712 146297834 -20352462 + (TTTC)n Simple_repeat Simple_repeat 4 124 0 5 1701 16465 144 20 82 chrX 146297834 146300743 -20349553 - Lx LINE L1 -542 5341 2612 5 1701 10326 87 3 36 chrX 146300739 146301520 -20348776 - L1_Mus1 LINE L1 -118 6449 5676 5 1701 3203 85 8 0 chrX 146301520 146301922 -20348374 + L1_Mus1 LINE L1 6162 6566 -1 5 1701 10326 124 1 20 chrX 146301922 146303297 -20346999 - L1_Mus1 LINE L1 -208 5675 4326 5 1701 3199 165 26 54 chrX 146303275 146303965 -20346331 - L1_Mur1 LINE L1 -2813 3073 2403 5 1701 1214 166 22 5 chrX 146303963 146304279 -20346017 - L1_Mur1 LINE L1 -4496 1390 1068 5 1701 1638 194 87 143 chrX 146304279 146304797 -20345499 + RMER19B LTR ERVK 1 489 -413 5 1701 311 282 83 118 chrX 146305307 146305536 -20344760 - MLT2B5 LTR ERVL -261 340 120 5 1701 543 277 65 60 chrX 146305405 146305605 -20344691 - MTEa LTR MaLR -157 222 22 5 1701 407 246 114 0 chrX 146305781 146305895 -20344401 + MER5A1 DNA MER1_type 38 164 -2 5 1701 183 329 23 58 chrX 146306239 146306326 -20343970 + MIRm SINE MIR 85 168 -108 5 1701 277 402 49 0 chrX 146306634 146306756 -20343540 + MLT1H1 LTR MaLR 315 442 -113 5 1701 4383 155 31 2 chrX 146306942 146307862 -20342434 - Lx5 LINE L1 -1062 5988 5024 5 1701 510 61 0 0 chrX 146307863 146307929 -20342367 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 1701 4088 213 58 6 chrX 146307933 146308791 -20341505 + Lx5 LINE L1 6148 7050 0 5 1701 335 304 118 0 chrX 146308963 146309065 -20341231 + PB1 SINE Alu 14 127 0 5 1701 1991 128 7 29 chrX 146309234 146309541 -20340755 - L1_Mus3 LINE L1 -1 6637 6338 5 1701 1393 176 0 0 chrX 146309544 146309777 -20340519 + L1_Mm LINE L1 5411 5643 -240 5 1701 382 233 158 0 chrX 146309779 146309899 -20340397 + B3 SINE B2 53 191 -25 5 1701 2580 130 138 36 chrX 146310981 146311452 -20338844 + MURVY-LTR LTR ERV1 1 519 0 5 1701 10753 296 51 46 chrX 146311452 146316853 -20333443 + RLTR6-int LTR ERV1 3 5646 -2132 5 1701 2940 125 90 33 chrX 146317143 146317632 -20332664 + MURVY-LTR LTR ERV1 1 517 -2 5 1701 1091 133 4 0 chrX 146317802 146318047 -20332249 + (TG)n Simple_repeat Simple_repeat 1 246 0 5 1701 354 287 8 25 chrX 146318207 146318325 -20331971 + PB1D9 SINE Alu 5 120 0 5 1701 316 358 18 36 chrX 146318803 146318971 -20331325 - B4 SINE B4 -18 274 110 5 1701 446 324 14 27 chrX 146319089 146319235 -20331061 - RSINE1 SINE B4 -19 146 3 5 1701 214 288 15 0 chrX 146319247 146319313 -20330983 - B4 SINE B4 -207 85 19 5 1701 5732 87 5 5 chrX 146319820 146320568 -20329728 + L1Md_F2 LINE L1 5835 6582 0 5 1701 215 224 16 65 chrX 146320777 146320839 -20329457 + B4 SINE B4 15 73 -219 5 1701 215 340 79 53 chrX 146321124 146321143 -20329153 + ID SINE ID 49 77 -147 5 1701 349 30 10 5 chrX 146321143 146321198 -20329098 - RLTR1C LTR ERV1 0 512 457 5 1701 310 358 8 16 chrX 146321176 146321298 -20328998 + B1F SINE Alu 29 149 0 5 1701 215 340 79 53 chrX 146321198 146321276 -20329020 + ID_B1 SINE B4 78 204 -20 5 1701 535 276 136 50 chrX 146321341 146321562 -20328734 + Lx5 LINE L1 6480 6719 -331 5 1701 1729 126 0 0 chrX 146321820 146322058 -20328238 - L1_Mus1 LINE L1 -1 6566 6329 5 1701 301 271 58 117 chrX 146322320 146322508 -20327788 + MER5A DNA MER1_type 4 180 -9 5 1701 1200 89 0 0 chrX 146322570 146322716 -20327580 + B1_Mm SINE Alu 2 147 0 5 1701 527 268 32 0 chrX 146322843 146322966 -20327330 + B1F1 SINE Alu 6 132 -17 5 1701 300 27 0 0 chrX 146322975 146323012 -20327284 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 5 1701 693 231 7 7 chrX 146323367 146323511 -20326785 + B1_Mur3 SINE Alu 6 149 0 5 1701 22 56 0 0 chrX 146323511 146323547 -20326749 + AT_rich Low_complexity Low_complexity 1 36 0 5 1701 268 352 4 65 chrX 146323593 146323704 -20326592 + PB1D10 SINE Alu 6 118 -2 5 1701 303 336 8 15 chrX 146323730 146323863 -20326433 + L1MC2 LINE L1 6100 6231 -113 5 1701 542 71 141 0 chrX 146323984 146324069 -20326227 - RMER19A LTR ERVK 0 737 641 5 1701 251 130 19 0 chrX 146324102 146324156 -20326140 + (TTAA)n Simple_repeat Simple_repeat 2 56 0 5 1701 3755 157 37 8 chrX 146324179 146324220 -20326076 - RMER19A LTR ERVK -65 672 627 5 1701 3111 35 3 0 chrX 146324220 146324565 -20325731 + ORR1A0 LTR MaLR 1 346 0 5 1701 3755 157 37 8 chrX 146324565 146325176 -20325120 - RMER19A LTR ERVK -111 626 2 5 1701 397 278 41 0 chrX 146325240 146325337 -20324959 + B4A SINE B4 1 101 -191 5 1701 469 281 109 42 chrX 146325405 146325737 -20324559 + L1MB8 LINE L1 5742 6101 -79 5 1701 3519 43 2 0 chrX 146325767 146326160 -20324136 - MTA_Mm LTR MaLR 0 396 3 5 1701 309 307 57 28 chrX 146326164 146326305 -20323991 + B1F2 SINE Alu 5 149 0 5 1701 560 281 145 25 chrX 146326696 146326937 -20323359 + Lx8 LINE L1 7170 7439 -34 5 1701 2803 45 0 0 chrX 146327218 146327552 -20322744 + L1Md_F2 LINE L1 5253 5586 -297 5 1701 8089 68 2 12 chrX 146327552 146328556 -20321740 + L1Md_F2 LINE L1 5587 6580 -2 5 1701 222 214 0 0 chrX 146328757 146328799 -20321497 + B3A SINE B2 4 45 -153 5 1701 2175 129 17 14 chrX 146328824 146329163 -20321133 + RMER17D LTR ERVK 1 343 -546 5 1701 904 117 0 18 chrX 146329163 146329328 -20320968 + (TCTCC)n Simple_repeat Simple_repeat 2 163 0 5 1701 1750 155 248 32 chrX 146329328 146329354 -20320942 + RMER17D LTR ERVK 453 477 -429 5 1701 252 0 0 0 chrX 146329354 146329382 -20320914 + (TC)n Simple_repeat Simple_repeat 2 29 0 5 1701 261 0 0 0 chrX 146329382 146329410 -20320886 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 1701 1750 155 248 32 chrX 146329410 146329509 -20320787 + RMER17D LTR ERVK 478 567 -339 5 1701 2884 68 17 3 chrX 146329885 146330239 -20320057 - L1_Mus1 LINE L1 0 6567 6209 5 1701 2184 121 9 9 chrX 146330239 146330582 -20319714 + RMER17D LTR ERVK 547 889 0 5 1701 460 138 0 22 chrX 146330582 146330671 -20319625 - Lx LINE L1 -12 6642 6556 5 1701 465 148 0 0 chrX 146331054 146331135 -20319161 + (CCCA)n Simple_repeat Simple_repeat 3 83 0 5 1701 247 365 50 6 chrX 146331135 146331295 -20319001 - L2a LINE L2 0 3426 3260 5 1701 189 107 0 0 chrX 146332924 146332952 -20317344 + (TGG)n Simple_repeat Simple_repeat 2 29 0 6 1701 346 305 23 0 chrX 146334057 146334185 -20316111 - L1MC1 LINE L1 -163 6170 6040 6 1701 5741 99 25 5 chrX 146334182 146335642 -20314654 - L1VL2 LINE L1 -1952 1663 172 6 1701 299 279 23 34 chrX 146335639 146335766 -20314530 - L1MC1 LINE L1 -390 5954 5836 6 1701 195 143 31 31 chrX 146335776 146335841 -20314455 + (TTG)n Simple_repeat Simple_repeat 2 66 0 6 1701 277 259 0 69 chrX 146335849 146335936 -20314360 - ID4_ SINE ID 0 83 3 6 1701 203 111 0 82 chrX 146336120 146336169 -20314127 + A-rich Low_complexity Low_complexity 2 46 0 6 1701 393 240 23 62 chrX 146336247 146336376 -20313920 - L1MCa LINE L1 -5875 633 510 6 1701 525 307 87 19 chrX 146336734 146337000 -20313296 - L1MCa LINE L1 -6220 288 5 6 1701 391 258 89 22 chrX 146337223 146337358 -20312938 - B1F2 SINE Alu 0 149 6 6 1701 328 252 40 0 chrX 146337499 146337598 -20312698 + MER53 DNA hAT 91 193 0 6 1701 180 0 0 0 chrX 146337695 146337715 -20312581 + (CAG)n Simple_repeat Simple_repeat 2 21 0 6 1701 393 86 0 0 chrX 146337788 146337846 -20312450 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 6 1701 284 102 0 20 chrX 146337897 146337947 -20312349 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 6 1701 300 320 15 46 chrX 146338045 146338176 -20312120 + LTR16A1 LTR ERVL 55 181 -275 6 1701 186 103 0 0 chrX 146338198 146338227 -20312069 + (TCTCCC)n Simple_repeat Simple_repeat 1 29 0 6 1701 1154 216 51 107 chrX 146338447 146338494 -20311802 + ORR1D1 LTR MaLR 1 38 -336 6 1701 1156 51 0 0 chrX 146338494 146338632 -20311664 + B1_Mus1 SINE Alu 3 140 -8 6 1701 190 29 88 0 chrX 146338633 146338667 -20311629 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 6 1701 1154 216 51 107 chrX 146338667 146339011 -20311285 + ORR1D1 LTR MaLR 39 372 -2 6 1701 1808 130 0 45 chrX 146339251 146339564 -20310732 + Lx3B LINE L1 6672 6970 -3 6 1701 297 279 0 0 chrX 146339852 146339920 -20310376 + B1F SINE Alu 21 88 -61 6 1701 623 197 21 35 chrX 146340048 146340190 -20310106 + B1_Mur4 SINE Alu 5 144 -6 6 1701 358 305 19 108 chrX 146340235 146340270 -20310026 + RSINE1 SINE B4 5 39 -126 6 1701 2541 101 133 26 chrX 146340270 146340699 -20309597 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1701 358 305 19 108 chrX 146340699 146340821 -20309475 + RSINE1 SINE B4 40 148 -17 6 1701 492 18 0 0 chrX 146340832 146340889 -20309407 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 6 1701 1524 251 81 17 chrX 146340915 146341325 -20308971 - Lx6 LINE L1 -179 7281 6846 6 1701 755 276 39 0 chrX 146341605 146341808 -20308488 - ID_B1 SINE B4 -12 212 2 6 1701 2406 141 17 7 chrX 146341860 146342266 -20308030 + Lx2A LINE L1 6589 6998 -10 6 1701 348 83 0 0 chrX 146342267 146342315 -20307981 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 6 1701 416 277 84 8 chrX 146342345 146342476 -20307820 + B3A SINE B2 48 188 -10 6 1701 1892 174 34 13 chrX 146342509 146342887 -20307409 - ORR1B1 LTR MaLR -8 386 1 6 1701 374 267 26 58 chrX 146342892 146343047 -20307249 + B3A SINE B2 60 209 -7 6 1701 202 91 67 22 chrX 146344028 146344073 -20306223 + A-rich Low_complexity Low_complexity 3 49 0 6 1701 241 184 102 0 chrX 146344202 146344251 -20306045 - ID_B1 SINE B4 -17 207 154 6 1701 236 303 36 28 chrX 146344424 146344525 -20305771 + B1F1 SINE Alu 19 118 -2 6 1701 394 252 210 8 chrX 146344529 146344653 -20305643 + B3 SINE B2 3 151 -65 6 1701 6266 24 0 0 chrX 146344794 146345507 -20304789 - L1_Mm LINE L1 -195 5688 4976 6 1701 1178 35 0 0 chrX 146345508 146345653 -20304643 + L1Md_A LINE L1 6436 6580 -2 6 1701 567 157 0 0 chrX 146345838 146345946 -20304350 + (CCTA)n Simple_repeat Simple_repeat 3 110 0 6 1701 753 259 20 15 chrX 146345959 146346163 -20304133 - ID_B1 SINE B4 -18 206 2 6 1701 216 0 0 0 chrX 146346255 146346279 -20304017 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1701 266 261 86 70 chrX 146346539 146346727 -20303569 - ORR1B1 LTR MaLR -148 211 26 6 1701 520 320 0 7 chrX 146346885 146347033 -20303263 + B1F1 SINE Alu 1 147 -2 6 1701 321 295 18 37 chrX 146347171 146347280 -20303016 + B3A SINE B2 1 107 -91 6 1701 425 103 15 0 chrX 146347280 146347348 -20302948 + (TA)n Simple_repeat Simple_repeat 1 69 0 6 1701 22 56 0 0 chrX 146347353 146347389 -20302907 + AT_rich Low_complexity Low_complexity 1 36 0 6 1701 551 363 18 4 chrX 146347407 146347634 -20302662 + B4A SINE B4 2 231 -61 6 1701 533 301 13 19 chrX 146347635 146347794 -20302502 + RSINE1 SINE B4 6 163 -2 6 1701 237 190 0 79 chrX 146347834 146347897 -20302399 + B4A SINE B4 235 292 0 6 1701 298 238 12 70 chrX 146348090 146348176 -20302120 - ID4 SINE ID 0 83 3 6 1701 225 304 95 35 chrX 146348191 146348307 -20301989 + MER58B DNA MER1_type 172 294 -47 6 1701 344 344 24 8 chrX 146348725 146348848 -20301448 - B4A SINE B4 -166 126 2 6 1701 274 284 0 16 chrX 146349395 146349482 -20300814 + ID4 SINE ID 9 93 -59 6 1701 754 165 15 8 chrX 146349666 146349800 -20300496 + B1_Mus2 SINE Alu 1 135 -12 6 1701 966 122 0 0 chrX 146349801 146349981 -20300315 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 1701 264 111 0 0 chrX 146349981 146350025 -20300271 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 6 1701 2649 167 31 26 chrX 146351439 146351979 -20298317 + RLTR13D1 LTR ERVK 1 543 -359 6 1701 3310 112 28 8 chrX 146351952 146352519 -20297777 + RLTR13D1 LTR ERVK 227 803 0 6 1701 419 324 61 3 chrX 146353054 146353281 -20297015 - MLT1E2 LTR MaLR -30 597 283 6 1701 812 176 0 14 chrX 146353528 146353672 -20296624 - B1_Mus1 SINE Alu 0 148 7 6 1701 492 18 0 0 chrX 146353691 146353748 -20296548 + (GGAA)n Simple_repeat Simple_repeat 2 58 0 6 1701 247 232 18 0 chrX 146353784 146353840 -20296456 + ID4_ SINE ID 24 80 -3 6 1701 260 250 0 0 chrX 146353840 146353892 -20296404 + polypurine Low_complexity Low_complexity 1 52 0 6 1701 1602 318 24 7 chrX 146354080 146354625 -20295671 + MuRRS4-int LTR ERV1 3722 4275 -788 6 1701 2492 133 124 34 chrX 146354897 146355373 -20294923 + MURVY-LTR LTR ERV1 1 519 0 6 1701 320 193 9 0 chrX 146355537 146355651 -20294645 + (TG)n Simple_repeat Simple_repeat 1 115 0 6 1701 282 265 16 71 chrX 146355828 146355954 -20294342 + PB1D9 SINE Alu 2 120 0 6 1701 2165 107 239 26 chrX 146356454 146356906 -20293390 + RLTR6_Mm LTR ERV1 37 584 -70 6 1701 306 319 30 48 chrX 146357327 146357495 -20292801 - B4 SINE B4 -18 274 110 6 1701 225 362 20 34 chrX 146357568 146357714 -20292582 - RSINE1 SINE B4 -19 146 3 6 1701 251 111 0 0 chrX 146358577 146358613 -20291683 + B4 SINE B4 38 73 -219 6 1701 3413 115 18 4 chrX 146358920 146359416 -20290880 - RLTR1C LTR ERV1 0 503 1 6 1701 405 258 159 0 chrX 146359449 146359612 -20290684 + B3 SINE B2 24 212 -4 6 1701 527 112 10 0 chrX 146360806 146360904 -20289392 + (TG)n Simple_repeat Simple_repeat 1 99 0 6 1701 300 282 0 30 chrX 146361138 146361260 -20289036 + B1_Mm SINE Alu 2 120 0 6 1701 266 325 30 48 chrX 146362077 146362245 -20288051 - B4 SINE B4 -18 274 110 6 1701 342 345 14 27 chrX 146362317 146362463 -20287833 - RSINE1 SINE B4 -19 146 3 6 1701 224 167 0 0 chrX 146363296 146363332 -20286964 + B4 SINE B4 38 73 -219 6 1701 3637 96 0 18 chrX 146363636 146364148 -20286148 - RLTR1C LTR ERV1 0 503 1 6 1701 356 306 109 29 chrX 146364181 146364356 -20285940 + B3 SINE B2 24 212 -4 6 1701 416 194 7 0 chrX 146365537 146365676 -20284620 + (TG)n Simple_repeat Simple_repeat 1 140 0 6 1701 340 282 17 25 chrX 146365867 146365987 -20284309 + PB1D9 SINE Alu 2 120 0 6 1701 272 306 24 47 chrX 146366827 146366954 -20283342 - B4 SINE B4 -46 246 123 6 1701 257 366 14 27 chrX 146367040 146367186 -20283110 - RSINE1 SINE B4 -19 146 3 6 1701 224 167 0 0 chrX 146368019 146368055 -20282241 + B4 SINE B4 38 73 -219 6 1701 3751 93 0 4 chrX 146368359 146368864 -20281432 - RLTR1C LTR ERV1 0 503 1 6 1701 295 257 198 2 chrX 146369024 146369168 -20281128 + B3 SINE B2 22 191 -7 6 1701 5798 150 34 40 chrX 146369227 146370341 -20279955 + L1Md_T LINE L1 99 1205 -5411 6 1701 36986 33 0 0 chrX 146370347 146374763 -20275533 + L1Md_T LINE L1 1170 5586 -297 6 1701 8160 56 0 0 chrX 146374763 146375759 -20274537 + L1Md_T LINE L1 5587 6582 0 6 1701 192 77 0 0 chrX 146375821 146375847 -20274449 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1701 433 155 16 0 chrX 146377033 146377162 -20273134 + (TG)n Simple_repeat Simple_repeat 2 132 0 6 1701 299 302 0 56 chrX 146377392 146377518 -20272778 + PB1D9 SINE Alu 2 120 0 6 1701 241 351 51 34 chrX 146378306 146378483 -20271813 - B4 SINE B4 -3 289 110 6 1701 241 358 32 32 chrX 146378546 146378702 -20271594 - RSINE1 SINE B4 -7 158 3 6 1701 212 173 0 103 chrX 146378807 146378865 -20271431 + A-rich Low_complexity Low_complexity 1 52 0 6 1701 229 159 23 0 chrX 146379563 146379607 -20270689 + B4 SINE B4 29 73 -219 6 1701 3639 102 4 4 chrX 146379911 146380413 -20269883 - RLTR1C LTR ERV1 0 503 2 6 1701 452 259 109 29 chrX 146380447 146380622 -20269674 + B3 SINE B2 24 212 -4 6 1701 737 110 7 0 chrX 146381816 146381952 -20268344 + (TG)n Simple_repeat Simple_repeat 1 137 0 6 1701 334 278 8 25 chrX 146382177 146382295 -20268001 + PB1D9 SINE Alu 5 120 0 6 1701 30 45 0 0 chrX 146382433 146382477 -20267819 + AT_rich Low_complexity Low_complexity 1 44 0 6 1701 249 33 0 0 chrX 146382989 146383019 -20267277 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1701 284 352 22 38 chrX 146383112 146383295 -20267001 - B4 SINE B4 -3 289 110 6 1701 383 314 28 35 chrX 146383368 146383513 -20266783 - RSINE1 SINE B4 -19 146 3 6 1701 518 122 9 0 chrX 146384698 146384805 -20265491 + (TG)n Simple_repeat Simple_repeat 1 108 0 6 1701 268 322 8 25 chrX 146385031 146385152 -20265144 + PB1D9 SINE Alu 2 120 0 7 1701 393 127 0 0 chrX 146385578 146385657 -20264639 + (T)n Simple_repeat Simple_repeat 1 79 0 7 1701 8387 21 1 3 chrX 146386246 146387375 -20262921 - L1Md_A LINE L1 -5752 972 1 7 1701 8327 3 0 0 chrX 146387371 146388279 -20262017 + L1Md_A LINE L1 4679 5586 -297 7 1701 9206 1 0 1 chrX 146388279 146389301 -20260995 + L1Md_A LINE L1 5587 6582 0 7 1701 280 350 48 0 chrX 146389918 146390021 -20260275 + PB1D7 SINE Alu 3 110 -10 7 1701 1169 169 29 29 chrX 146390181 146390456 -20259840 + Lx2A1 LINE L1 6733 7007 -1 7 1701 387 230 2 16 chrX 146390507 146390593 -20259703 + ID SINE ID 9 88 -204 7 1701 2143 205 43 39 chrX 146390614 146391126 -20259170 + Lx LINE L1 6134 6647 -7 7 1701 2254 176 8 32 chrX 146391121 146391296 -20259000 + L1_Mm LINE L1 5289 5461 -422 7 1701 1163 122 69 18 chrX 146391296 146391513 -20258783 + L1_Mus3 LINE L1 6407 6634 -4 7 1701 2254 176 8 32 chrX 146391513 146391808 -20258488 + L1_Mm LINE L1 5462 5748 -135 7 1701 1788 151 23 3 chrX 146391801 146392146 -20258150 - L1_Mur2 LINE L1 -576 5301 4950 7 1701 221 303 0 33 chrX 146392514 146392606 -20257690 + (TATATG)n Simple_repeat Simple_repeat 3 91 0 7 1701 499 333 7 116 chrX 146392634 146392685 -20257611 - B4 SINE B4 -26 266 217 7 1701 212 0 36 0 chrX 146392685 146392713 -20257583 + (TTG)n Simple_repeat Simple_repeat 2 30 0 7 1701 499 333 7 116 chrX 146392713 146392870 -20257426 - B4 SINE B4 -76 216 77 7 1701 316 331 98 33 chrX 146392870 146393023 -20257273 - RSINE1 SINE B4 0 165 3 7 1701 499 333 7 116 chrX 146393023 146393098 -20257198 - B4 SINE B4 -216 76 13 7 1701 4206 263 53 41 chrX 146393535 146395431 -20254865 - Lx9 LINE L1 -8 7636 5712 7 1701 315 228 0 0 chrX 146395409 146395488 -20254808 - L1_Rod LINE L1 -1525 4322 4244 7 1701 510 277 146 4 chrX 146395737 146395976 -20254320 + Lx8 LINE L1 7196 7468 -5 7 1701 270 298 91 45 chrX 146396005 146396093 -20254203 + B3A SINE B2 25 116 -82 7 1701 486 0 0 0 chrX 146396144 146396198 -20254098 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1701 380 334 9 36 chrX 146397412 146397552 -20252744 - B1F SINE Alu -1 148 13 7 1701 570 312 61 1 chrX 146397882 146398055 -20252241 + B3A SINE B2 2 188 -28 7 1701 495 33 0 0 chrX 146398055 146398116 -20252180 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1701 564 318 82 10 chrX 146398116 146398136 -20252160 + B3 SINE B2 189 208 -8 7 1701 348 318 142 69 chrX 146398341 146398574 -20251722 + B4A SINE B4 14 263 -29 7 1701 555 16 0 0 chrX 146398613 146398677 -20251619 + (TC)n Simple_repeat Simple_repeat 2 65 0 7 1701 240 59 0 0 chrX 146398679 146398713 -20251583 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 1701 207 135 37 37 chrX 146398877 146398931 -20251365 + T-rich Low_complexity Low_complexity 3 56 0 7 1701 255 276 0 0 chrX 146398939 146398997 -20251299 - ID4_ SINE ID -17 66 9 7 1701 408 335 125 0 chrX 146399068 146399220 -20251076 - ID_B1 SINE B4 -52 172 2 7 1701 216 289 0 0 chrX 146399767 146399819 -20250477 - ID4_ SINE ID -26 57 6 7 1701 649 323 57 5 chrX 146400376 146400569 -20249727 + ID_B1 SINE B4 6 208 -16 7 1701 204 225 0 0 chrX 146400883 146400923 -20249373 + GA-rich Low_complexity Low_complexity 3 42 0 7 1701 404 147 0 0 chrX 146402072 146402140 -20248156 - U3 snRNA snRNA -149 68 1 7 1701 288 260 0 0 chrX 146402443 146402520 -20247776 + (TG)n Simple_repeat Simple_repeat 2 78 0 7 1701 604 323 34 24 chrX 146402601 146402893 -20247403 - Lx9 LINE L1 -1067 6577 6283 7 1701 5916 136 27 17 chrX 146402893 146404062 -20246234 - Lx LINE L1 -1 6653 5476 7 1701 774 148 97 6 chrX 146404060 146404278 -20246018 - L1VL2 LINE L1 -444 3470 3219 7 1701 593 90 11 0 chrX 146404280 146404369 -20245927 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 7 1701 6591 96 12 3 chrX 146404859 146405839 -20244457 - L1Md_F2 LINE L1 -1 6581 5593 7 212 11522 83 24 4 chrX 146405838 146408385 -20241911 - L1Md_F LINE L1 -2898 2985 387 7 1702 6363 137 82 9 chrX 146408387 146410328 -20239968 - L1VL2 LINE L1 -1449 2465 372 7 1702 297 289 12 12 chrX 146410709 146410798 -20239498 + B3A SINE B2 1 89 -127 7 1702 241 353 48 62 chrX 146410798 146410854 -20239442 + ID_B1 SINE B4 1 143 -81 7 1702 223 224 143 13 chrX 146411326 146411403 -20238893 + MIR3 SINE MIR 85 171 -37 7 1702 190 356 14 0 chrX 146412114 146412187 -20238109 - MIRb SINE MIR -75 193 120 7 1702 473 341 29 0 chrX 146413443 146413648 -20236648 - MLT1E2 LTR MaLR -30 597 387 7 1702 761 213 7 14 chrX 146413911 146414054 -20236242 - B1_Mus1 SINE Alu 0 148 7 7 1702 648 140 0 0 chrX 146414072 146414179 -20236117 + (GGGA)n Simple_repeat Simple_repeat 2 108 0 7 1702 239 226 0 19 chrX 146414268 146414322 -20235974 + GA-rich Low_complexity Low_complexity 4 56 0 7 1702 705 325 29 0 chrX 146414608 146414814 -20235482 + ID_B1 SINE B4 3 214 -10 7 1702 227 303 39 48 chrX 146414920 146414941 -20235355 - ID_B1 SINE B4 -32 192 90 7 1702 251 301 36 0 chrX 146414941 146415024 -20235272 - PB1D10 SINE Alu -23 94 9 7 1702 244 337 61 0 chrX 146415078 146415176 -20235120 - B1F SINE Alu -37 112 9 7 1702 238 338 27 0 chrX 146415208 146415282 -20235014 - ID4 SINE ID -4 79 4 7 1702 296 64 21 0 chrX 146415687 146415734 -20234562 + (TTG)n Simple_repeat Simple_repeat 2 49 0 7 1702 376 236 69 52 chrX 146415735 146415817 -20234479 - ID_B1 SINE B4 -4 220 136 7 1702 3298 51 2 0 chrX 146415817 146416212 -20234084 + MTA_Mm LTR MaLR 1 396 0 7 1702 376 236 69 52 chrX 146416212 146416245 -20234051 - ID_B1 SINE B4 -89 135 103 7 1702 233 250 25 0 chrX 146416293 146416373 -20233923 - L1MB7 LINE L1 -56 6128 6047 7 1702 378 239 17 17 chrX 146417212 146417327 -20232969 + (TCTG)n Simple_repeat Simple_repeat 2 116 0 7 1702 244 357 107 0 chrX 146417351 146417463 -20232833 - B3A SINE B2 -22 176 53 7 1702 684 67 0 0 chrX 146417873 146417963 -20232333 + (TG)n Simple_repeat Simple_repeat 2 91 0 7 1702 428 214 45 60 chrX 146418658 146418792 -20231504 - ID_B1 SINE B4 0 224 93 7 1702 261 0 0 0 chrX 146419537 146419566 -20230730 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 7 1702 408 88 0 0 chrX 146419684 146419741 -20230555 + (CA)n Simple_repeat Simple_repeat 2 58 0 7 1702 606 86 129 0 chrX 146419780 146419873 -20230423 - BC1_Mm scRNA scRNA -35 117 13 7 1702 40 21 0 0 chrX 146419896 146419943 -20230353 + AT_rich Low_complexity Low_complexity 1 47 0 7 1702 595 300 185 10 chrX 146420167 146420458 -20229838 + MTE2a LTR MaLR 1 342 -37 7 1702 305 0 50 0 chrX 146420458 146420498 -20229798 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 7 1702 902 147 0 0 chrX 146420498 146420634 -20229662 - B1_Mus2 SINE Alu -11 136 1 7 1702 304 248 34 68 chrX 146420531 146420648 -20229648 - RLTR25B LTR ERVK -526 502 390 7 1702 201 74 0 0 chrX 146420648 146420675 -20229621 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1702 993 74 0 0 chrX 146421154 146421289 -20229007 + (TTTC)n Simple_repeat Simple_repeat 3 137 0 7 1702 3743 75 10 4 chrX 146421294 146421802 -20228494 - L1_Mus1 LINE L1 -2 6565 6055 7 1702 570 243 0 14 chrX 146421802 146421966 -20228330 - ID_B1 SINE B4 -18 206 2 7 1702 34 24 0 0 chrX 146422307 146422348 -20227948 + AT_rich Low_complexity Low_complexity 1 41 0 7 1702 244 300 25 12 chrX 146422472 146422553 -20227743 + MER20 DNA MER1_type 121 202 -17 7 1702 902 126 49 120 chrX 146422936 146423157 -20227139 - B2_Mm2 SINE B2 -7 188 1 7 1702 281 288 39 85 chrX 146423207 146423336 -20226960 - RSINE1 SINE B4 -31 134 12 7 1702 474 300 50 0 chrX 146423331 146423471 -20226825 - ID_B1 SINE B4 -77 147 1 7 1702 344 319 65 78 chrX 146424730 146424883 -20225413 + MER5A DNA MER1_type 8 158 -31 7 1702 357 272 9 81 chrX 146425004 146425136 -20225160 - B3A SINE B2 -5 193 70 7 1702 291 305 153 23 chrX 146425171 146425302 -20224994 - B1F2 SINE Alu 0 149 2 7 1702 534 126 53 0 chrX 146425370 146425465 -20224831 - L1_Mur2 LINE L1 -2000 3877 3778 7 1702 235 286 24 94 chrX 146425473 146425558 -20224738 - ID4 SINE ID -2 81 3 7 1702 279 288 14 0 chrX 146425702 146425775 -20224521 + ID4_ SINE ID 7 80 -3 7 1702 445 274 81 0 chrX 146425850 146425974 -20224322 + ID_B1 SINE B4 81 214 -10 7 1702 303 268 26 18 chrX 146426013 146426127 -20224169 + PB1D10 SINE Alu 2 116 -1 7 1702 429 66 0 0 chrX 146426139 146426200 -20224096 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1702 21 0 0 0 chrX 146426486 146426507 -20223789 + AT_rich Low_complexity Low_complexity 1 21 0 7 1702 250 217 33 16 chrX 146426607 146426668 -20223628 + BC1_Mm scRNA scRNA 22 83 -69 7 1702 219 36 0 0 chrX 146427200 146427228 -20223068 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 7 1702 299 239 51 61 chrX 146427313 146427411 -20222885 - B4A SINE B4 -190 102 6 7 1702 245 33 0 0 chrX 146427796 146427826 -20222470 - L1_Mus1 LINE L1 -680 5887 5858 7 1702 867 113 7 0 chrX 146427824 146427975 -20222321 + L1_Mm LINE L1 5254 5405 -478 7 1702 2166 147 26 88 chrX 146427989 146428124 -20222172 - L1_Mur1 LINE L1 -2340 3546 3423 7 1702 1583 129 49 21 chrX 146428124 146428409 -20221887 - Lx LINE L1 -4 6650 6358 7 1702 2166 147 26 88 chrX 146428409 146428810 -20221486 - L1_Mur1 LINE L1 -2464 3422 3043 7 1702 42 36 0 0 chrX 146428821 146428877 -20221419 + AT_rich Low_complexity Low_complexity 1 56 0 7 1702 4524 66 2 13 chrX 146428880 146429477 -20220819 - L1Md_F2 LINE L1 -4 6578 5989 7 1702 234 243 83 28 chrX 146429644 146429716 -20220580 - B1F SINE Alu -29 120 45 7 1702 242 207 16 65 chrX 146430013 146430075 -20220221 + B4 SINE B4 15 73 -219 7 1702 1937 75 8 4 chrX 146430377 146430644 -20219652 - RLTR1C LTR ERV1 0 503 236 7 1702 705 10 105 48 chrX 146430643 146430748 -20219548 - RLTR1C LTR ERV1 -392 111 1 7 1702 13662 89 47 22 chrX 146430748 146432893 -20217403 - MMVL30-int LTR ERV1 0 3698 1501 7 1702 333 0 0 0 chrX 146433038 146433075 -20217221 + (TC)n Simple_repeat Simple_repeat 2 38 0 8 1702 405 0 0 0 chrX 146433075 146433119 -20217177 + (TA)n Simple_repeat Simple_repeat 2 46 0 8 1702 483 151 54 141 chrX 146433212 146433497 -20216799 - MMVL30-int LTR ERV1 -2190 1508 960 7 1702 4509 133 4 4 chrX 146433562 146434300 -20215996 - MMVL30-int LTR ERV1 -2245 1453 716 8 1702 211 213 0 21 chrX 146434630 146434678 -20215618 + (CAGA)n Simple_repeat Simple_repeat 3 49 0 8 1702 2596 176 9 35 chrX 146434721 146435268 -20215028 - MMVL30-int LTR ERV1 -7023 533 1 8 1702 3809 88 2 6 chrX 146435268 146435773 -20214523 - RLTR1C LTR ERV1 0 503 1 8 1702 269 299 11 0 chrX 146435864 146435951 -20214345 + B3 SINE B2 125 212 -4 8 1702 23 0 0 0 chrX 146436185 146436208 -20214088 + AT_rich Low_complexity Low_complexity 1 23 0 8 1702 213 119 0 0 chrX 146436454 146436496 -20213800 + (T)n Simple_repeat Simple_repeat 1 42 0 8 1702 255 369 48 0 chrX 146437701 146437804 -20212492 + PB1D7 SINE Alu 3 110 -10 8 1702 306 0 0 0 chrX 146437923 146437957 -20212339 + (T)n Simple_repeat Simple_repeat 1 34 0 8 1702 1382 161 30 0 chrX 146438548 146438815 -20211481 + Lx2A1 LINE L1 6733 7007 -1 8 1702 331 281 60 17 chrX 146438877 146438993 -20211303 + ID_B1 SINE B4 9 129 -95 8 1702 1560 234 48 48 chrX 146438993 146439433 -20210863 + Lx LINE L1 6143 6582 -72 8 1702 420 82 0 0 chrX 146439731 146439792 -20210504 + (TC)n Simple_repeat Simple_repeat 1 61 0 8 1702 252 0 0 0 chrX 146439793 146439821 -20210475 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 1702 196 30 0 57 chrX 146439983 146440018 -20210278 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 8 1702 293 288 0 0 chrX 146440053 146440119 -20210177 - ID2 SINE ID -17 66 1 8 1702 523 293 120 5 chrX 146440151 146440343 -20209953 - ID_B1 SINE B4 -9 215 2 8 1702 423 330 0 0 chrX 146441478 146441578 -20208718 + ID_B1 SINE B4 6 105 -119 8 1702 35261 25 0 0 chrX 146441578 146447666 -20202630 - L1Md_T LINE L1 0 6585 401 8 1702 409 52 0 0 chrX 146447659 146447717 -20202579 - L1Md_T LINE L1 -6294 228 171 8 1702 229 200 0 0 chrX 146448138 146448178 -20202118 + GA-rich Low_complexity Low_complexity 3 42 0 8 1702 1393 88 22 11 chrX 146449834 146450018 -20200278 - B2_Mm2 SINE B2 -9 186 1 8 1702 369 149 15 0 chrX 146450066 146450133 -20200163 - U3 snRNA snRNA -149 68 1 8 1702 192 241 0 0 chrX 146450434 146450513 -20199783 + (TG)n Simple_repeat Simple_repeat 2 80 0 8 1702 606 336 24 8 chrX 146450609 146450855 -20199441 - Lx9 LINE L1 -1067 6577 6328 8 1702 8781 112 5 1 chrX 146450875 146452886 -20197410 + L1_Mus1 LINE L1 4547 6564 -3 8 1702 7119 61 1 23 chrX 146453010 146454008 -20196288 + L1Md_Gf LINE L1 243 1320 -5407 8 1702 39163 12 0 1 chrX 146454009 146459994 -20190302 + L1Md_A LINE L1 1 5586 -297 8 1702 9490 6 1 1 chrX 146459994 146460990 -20189306 + L1Md_A LINE L1 5587 6582 0 8 1702 189 0 0 0 chrX 146461016 146461037 -20189259 + (A)n Simple_repeat Simple_repeat 1 21 0 8 1702 34672 44 0 1 chrX 146461037 146465268 -20185028 + L1_Mm LINE L1 1299 5528 -355 8 1702 9816 34 0 0 chrX 146465269 146466392 -20183904 - MERVL-int LTR ERVL -672 4813 3691 8 1702 465 91 99 0 chrX 146466392 146466466 -20183830 + L1Md_T LINE L1 5496 5586 -297 8 1702 8842 42 0 1 chrX 146466466 146467463 -20182833 + L1Md_T LINE L1 5587 6582 0 8 1702 399 147 0 0 chrX 146468708 146468776 -20181520 - U3 snRNA snRNA -149 68 1 8 1702 313 247 0 0 chrX 146469079 146469156 -20181140 + (TG)n Simple_repeat Simple_repeat 2 78 0 8 1702 683 326 34 24 chrX 146469237 146469529 -20180767 - Lx9 LINE L1 -1067 6577 6283 8 1702 16508 134 26 28 chrX 146469529 146470862 -20179434 - Lx LINE L1 -1 6653 5342 8 1702 696 12 0 0 chrX 146470862 146470943 -20179353 + (TTTC)n Simple_repeat Simple_repeat 4 84 0 8 1702 16508 148 18 81 chrX 146470943 146473859 -20176437 - Lx LINE L1 -542 5341 2612 8 1702 10330 87 2 36 chrX 146473855 146474637 -20175659 - L1_Mus1 LINE L1 -118 6449 5676 8 1702 3213 87 8 0 chrX 146474637 146475039 -20175257 + L1_Mus1 LINE L1 6162 6566 -1 8 1702 10330 125 2 21 chrX 146475039 146476414 -20173882 - L1_Mus1 LINE L1 -208 5675 4326 8 1702 3156 170 26 54 chrX 146476392 146477082 -20173214 - L1_Mur1 LINE L1 -2813 3073 2403 8 1702 1234 171 22 0 chrX 146477080 146477393 -20172903 - L1_Mur1 LINE L1 -4496 1390 1068 8 1702 1587 207 87 143 chrX 146477393 146477911 -20172385 + RMER19B LTR ERVK 1 489 -413 8 1702 307 296 79 113 chrX 146478422 146478651 -20171645 - MLT2B5 LTR ERVL -261 340 120 8 1702 535 277 65 60 chrX 146478520 146478720 -20171576 - MTEa LTR MaLR -157 222 22 8 1702 423 237 114 0 chrX 146478896 146479010 -20171286 + MER5A1 DNA MER1_type 38 164 -2 8 1702 183 329 23 58 chrX 146479354 146479441 -20170855 + MIRm SINE MIR 85 168 -108 8 1702 242 344 21 11 chrX 146479600 146479694 -20170602 + MLT1H1 LTR MaLR 159 253 -326 8 1702 289 391 46 15 chrX 146479749 146479879 -20170417 + MLT1H1 LTR MaLR 315 448 -107 8 1702 4498 153 31 2 chrX 146480057 146480977 -20169319 - Lx5 LINE L1 -1062 5988 5024 8 1702 456 67 0 0 chrX 146480978 146481038 -20169258 + (TG)n Simple_repeat Simple_repeat 1 60 0 8 1702 4089 212 58 6 chrX 146481042 146481900 -20168396 + Lx5 LINE L1 6148 7050 0 8 1702 340 304 118 0 chrX 146482072 146482174 -20168122 + PB1 SINE Alu 14 127 0 8 1702 1992 132 10 3 chrX 146482343 146482640 -20167656 - L1_Mus3 LINE L1 -2 6636 6338 8 1702 1403 172 0 0 chrX 146482643 146482876 -20167420 + L1_Mm LINE L1 5411 5643 -240 8 1702 382 233 158 0 chrX 146482878 146482998 -20167298 + B3 SINE B2 53 191 -25 8 1702 2634 128 136 36 chrX 146484082 146484554 -20165742 + MURVY-LTR LTR ERV1 1 519 0 8 1702 10848 299 49 45 chrX 146484554 146489968 -20160328 + RLTR6-int LTR ERV1 3 5646 -2132 8 1702 2965 121 90 33 chrX 146490258 146490747 -20159549 + MURVY-LTR LTR ERV1 1 517 -2 8 1702 935 142 4 0 chrX 146490917 146491146 -20159150 + (TG)n Simple_repeat Simple_repeat 1 230 0 8 1702 339 296 8 25 chrX 146491306 146491424 -20158872 + PB1D9 SINE Alu 5 120 0 8 1702 316 358 18 36 chrX 146491911 146492079 -20158217 - B4 SINE B4 -18 274 110 8 1702 391 345 14 27 chrX 146492197 146492343 -20157953 - RSINE1 SINE B4 -19 146 3 8 1702 226 273 15 0 chrX 146492355 146492421 -20157875 - B4 SINE B4 -207 85 19 8 1702 5899 84 1 5 chrX 146492928 146493679 -20156617 + L1Md_F2 LINE L1 5835 6582 0 8 1702 225 340 79 53 chrX 146494232 146494251 -20156045 + ID SINE ID 49 73 -151 8 1702 342 25 0 0 chrX 146494251 146494291 -20156005 - RLTR1C LTR ERV1 0 503 464 8 1702 319 358 8 16 chrX 146494284 146494406 -20155890 + B1F SINE Alu 29 149 0 8 1702 225 340 79 53 chrX 146494291 146494384 -20155912 + ID_B1 SINE B4 74 204 -20 8 1702 510 306 106 0 chrX 146494480 146494640 -20155656 + Lx5 LINE L1 6507 6683 -367 8 1702 5526 103 14 22 chrX 146494922 146495688 -20154608 - L1_Mus1 LINE L1 -1 6566 5807 8 1702 234 307 0 13 chrX 146495688 146495756 -20154540 - L1MC5 LINE L1 -61 7900 7834 8 1702 3012 119 2 8 chrX 146495950 146496500 -20153796 - L1_Mus3 LINE L1 -684 5954 5407 8 1702 2070 125 7 3 chrX 146496500 146496797 -20153499 + L1_Mus3 LINE L1 6338 6635 -3 8 1702 307 318 18 27 chrX 146496954 146497064 -20153232 - PB1D10 SINE Alu -2 115 7 8 1702 3186 217 71 6 chrX 146497229 146497919 -20152377 - Lx5 LINE L1 0 7050 6316 8 1702 320 333 78 21 chrX 146497947 146498088 -20152208 - MLT1L LTR MaLR -151 459 311 8 1702 398 267 107 8 chrX 146498425 146498546 -20151750 - ID_B1 SINE B4 -91 133 1 8 1702 798 303 12 4 chrX 146498590 146498845 -20151451 - Lx7 LINE L1 -396 7300 7044 8 1702 288 310 32 90 chrX 146499549 146499737 -20150559 + MER5A DNA MER1_type 4 180 -9 8 1702 1164 103 0 0 chrX 146499799 146499945 -20150351 + B1_Mm SINE Alu 2 147 0 8 1702 26 0 0 0 chrX 146499945 146499971 -20150325 + AT_rich Low_complexity Low_complexity 1 26 0 8 1702 547 260 32 0 chrX 146500087 146500210 -20150086 + B1F1 SINE Alu 6 132 -17 1 1702 297 0 0 0 chrX 146500219 146500252 -20150044 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 2 1702 665 238 7 7 chrX 146500612 146500756 -20149540 + B1_Mur3 SINE Alu 6 149 0 3 1702 268 352 4 65 chrX 146500839 146500950 -20149346 + PB1D10 SINE Alu 6 118 -2 4 1702 303 336 8 15 chrX 146500976 146501109 -20149187 + L1MC2 LINE L1 6100 6231 -113 5 1702 542 71 141 0 chrX 146501230 146501315 -20148981 - RMER19A LTR ERVK 0 737 641 6 1702 251 130 19 0 chrX 146501348 146501402 -20148894 + (TTAA)n Simple_repeat Simple_repeat 1 55 0 7 1702 37589 31 1 7 chrX 146501414 146506600 -20143696 + L1Md_A LINE L1 441 5586 -297 8 1702 8841 38 1 0 chrX 146506600 146507595 -20142701 + L1Md_A LINE L1 5587 6582 0 8 1702 3809 156 35 8 chrX 146507618 146507659 -20142637 - RMER19A LTR ERVK -65 672 627 6 1702 3083 38 6 0 chrX 146507659 146508003 -20142293 + ORR1A0 LTR MaLR 1 346 0 9 1702 3809 156 35 8 chrX 146508003 146508615 -20141681 - RMER19A LTR ERVK -111 626 2 6 1702 397 278 41 0 chrX 146508679 146508776 -20141520 + B4A SINE B4 1 101 -191 1 1702 456 297 63 35 chrX 146508891 146509207 -20141089 + L1MB8 LINE L1 5805 6133 -41 1 1702 3498 46 2 0 chrX 146509209 146509602 -20140694 - MTA_Mm LTR MaLR 0 396 3 1 1702 525 302 0 0 chrX 146509606 146509745 -20140551 + ID_B1 SINE B4 86 224 0 1 1702 551 287 201 15 chrX 146510110 146510379 -20139917 + Lx8 LINE L1 7121 7439 -34 1 1702 1910 194 25 11 chrX 146510636 146510996 -20139300 - ORR1B2 LTR MaLR -2 365 1 1 1702 240 59 0 0 chrX 146511140 146511174 -20139122 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1702 3919 185 61 96 chrX 146511179 146512114 -20138182 + RMER19B LTR ERVK 1 902 0 1 1702 442 280 15 36 chrX 146513518 146513655 -20136641 - ID_B1 SINE B4 -4 220 87 1 1702 934 307 0 0 chrX 146514237 146514465 -20135831 + MTEa LTR MaLR 24 251 -128 1 1702 661 145 7 101 chrX 146514527 146514665 -20135631 - URR1B DNA MER1_type -100 125 1 2 1702 686 165 91 6 chrX 146515140 146515305 -20134991 + Lx9 LINE L1 7464 7642 -2 2 1702 875 250 50 10 chrX 146515546 146515748 -20134548 + B3 SINE B2 1 210 -6 2 1702 376 306 73 15 chrX 146515787 146515923 -20134373 + ID_B1 SINE B4 73 216 -8 2 1702 531 90 0 0 chrX 146515937 146516015 -20134281 + (GA)n Simple_repeat Simple_repeat 1 78 0 2 1702 432 51 0 0 chrX 146516126 146516185 -20134111 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1702 22 0 0 0 chrX 146516282 146516304 -20133992 + AT_rich Low_complexity Low_complexity 1 22 0 2 1702 310 288 0 59 chrX 146516783 146516868 -20133428 + ID4_ SINE ID 2 81 -2 2 1702 834 200 7 0 chrX 146516915 146517055 -20133241 + B1_Mur4 SINE Alu 2 142 -8 2 1702 223 344 56 0 chrX 146517119 146517209 -20133087 - B1F SINE Alu -50 99 5 2 1702 277 252 191 0 chrX 146517360 146517475 -20132821 + Charlie2a DNA MER1_type 185 321 -2540 3 1702 467 298 147 30 chrX 146517515 146518058 -20132238 + Charlie2a DNA MER1_type 1893 2499 -362 3 1702 5051 94 9 1 chrX 146519942 146520612 -20129684 + L1_Mus3 LINE L1 5959 6633 -5 3 1702 33250 77 2 3 chrX 146520620 146525856 -20124440 + L1Md_F2 LINE L1 266 5589 -297 3 1702 8390 57 3 2 chrX 146525857 146526850 -20123446 + L1Md_F2 LINE L1 5591 6584 -1 3 1702 222 214 0 0 chrX 146527050 146527092 -20123204 + B3A SINE B2 4 45 -153 3 1702 2315 146 24 30 chrX 146527120 146527760 -20122536 + RMER17D LTR ERVK 1 552 -337 3 1702 2925 62 17 3 chrX 146528132 146528486 -20121810 - L1_Mus1 LINE L1 0 6567 6209 3 1702 2184 121 9 9 chrX 146528486 146528829 -20121467 + RMER17D LTR ERVK 547 889 0 3 1702 473 139 12 0 chrX 146528829 146528915 -20121381 - Lx LINE L1 -12 6642 6556 3 1702 477 148 0 0 chrX 146529298 146529379 -20120917 + (CCCA)n Simple_repeat Simple_repeat 3 83 0 3 1702 247 365 50 6 chrX 146529379 146529539 -20120757 - L2a LINE L2 0 3426 3260 3 1702 568 280 147 14 chrX 146532379 146532711 -20117585 - L1MC1 LINE L1 -13 6320 5931 3 1702 21 0 0 0 chrX 146533117 146533138 -20117158 + AT_rich Low_complexity Low_complexity 1 21 0 4 1702 21 89 0 0 chrX 146533438 146533494 -20116802 + AT_rich Low_complexity Low_complexity 1 56 0 4 1702 279 284 0 0 chrX 146534198 146534272 -20116024 + PB1D10 SINE Alu 42 115 -2 4 1702 5930 108 19 5 chrX 146534416 146536047 -20114249 - L1VL2 LINE L1 -1789 1826 172 4 1702 235 316 16 79 chrX 146536044 146536171 -20114125 - L1MC1 LINE L1 -390 5954 5836 3 1702 226 197 0 57 chrX 146536181 146536251 -20114045 + T-rich Low_complexity Low_complexity 1 66 0 4 1702 294 329 0 0 chrX 146536251 146536330 -20113966 - ID4_ SINE ID -2 81 3 4 1702 219 133 0 82 chrX 146536514 146536563 -20113733 + A-rich Low_complexity Low_complexity 2 46 0 4 1702 405 240 23 62 chrX 146536642 146536771 -20113525 - L1MCa LINE L1 -5875 633 510 4 1702 343 253 10 40 chrX 146536954 146537053 -20113243 - PB1 SINE Alu -3 124 29 4 1702 600 299 87 19 chrX 146537137 146537403 -20112893 - L1MCa LINE L1 -6220 288 5 4 1702 213 235 0 0 chrX 146537591 146537642 -20112654 + T-rich Low_complexity Low_complexity 1 51 0 4 1702 460 237 97 22 chrX 146537642 146537776 -20112520 - B1F2 SINE Alu 0 149 6 5 1702 186 71 0 0 chrX 146537867 146537895 -20112401 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 5 1702 501 190 71 5 chrX 146537895 146538018 -20112278 + ORR1C1 LTR MaLR 244 376 -2 5 212 1919 127 0 48 chrX 146538259 146538573 -20111723 + Lx3B LINE L1 6672 6970 -3 5 1703 324 279 0 0 chrX 146538861 146538929 -20111367 + B1F SINE Alu 21 88 -61 5 1703 666 199 21 35 chrX 146539058 146539199 -20111097 + B1_Mur3 SINE Alu 5 143 -6 5 1703 422 298 20 66 chrX 146539244 146539395 -20110901 + RSINE1 SINE B4 5 148 -17 5 1703 441 54 0 0 chrX 146539406 146539462 -20110834 + (TAAA)n Simple_repeat Simple_repeat 4 59 0 5 1703 1658 258 68 12 chrX 146539485 146539913 -20110383 - Lx6 LINE L1 -179 7281 6830 5 1703 787 286 39 0 chrX 146540231 146540434 -20109862 - ID_B1 SINE B4 -12 212 2 5 1703 2623 134 17 12 chrX 146540484 146540893 -20109403 + Lx2A LINE L1 6589 6999 -9 6 1703 288 0 0 0 chrX 146540893 146540925 -20109371 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 6 1703 462 289 75 16 chrX 146540955 146541119 -20109177 + B3A SINE B2 48 209 -7 6 1703 2029 174 34 13 chrX 146541124 146541502 -20108794 - ORR1B1 LTR MaLR -8 386 1 6 1703 417 250 39 71 chrX 146541507 146541662 -20108634 + B3 SINE B2 60 209 -7 6 1703 202 91 67 22 chrX 146542644 146542689 -20107607 + A-rich Low_complexity Low_complexity 3 49 0 6 1703 246 184 102 0 chrX 146542818 146542867 -20107429 - ID_B1 SINE B4 -17 207 154 6 1703 275 303 36 28 chrX 146543040 146543141 -20107155 + B1F1 SINE Alu 19 118 -2 6 1703 454 252 210 8 chrX 146543145 146543269 -20107027 + B3 SINE B2 3 151 -65 6 1703 1512 18 0 0 chrX 146543410 146543576 -20106720 - L1_Mm LINE L1 -195 5688 5523 6 1703 1266 112 21 43 chrX 146543583 146543817 -20106479 + MusHAL1 LINE L1 1768 1996 -716 7 1703 3076 43 0 3 chrX 146543817 146544164 -20106132 - ORR1A0 LTR MaLR 0 346 1 7 1703 4266 39 3 5 chrX 146544164 146544710 -20105586 - ORR1A0-int LTR MaLR 0 1792 797 7 1703 4730 60 3 0 chrX 146544698 146545350 -20104946 - ORR1A0-int LTR MaLR -1138 654 1 7 1703 3178 29 0 0 chrX 146545350 146545696 -20104600 - ORR1A0 LTR MaLR 0 346 1 7 1703 3449 115 6 0 chrX 146545696 146546218 -20104078 + L1_Mm LINE L1 3196 3720 -2163 7 1703 2833 107 9 7 chrX 146546218 146546640 -20103656 + L1_Mm LINE L1 4006 4428 -1455 7 1703 6507 83 7 10 chrX 146546639 146547514 -20102782 + L1_Mus1 LINE L1 5674 6545 -22 7 1703 1338 223 13 23 chrX 146547516 146547824 -20102472 + L1VL1 LINE L1 3 307 -6115 7 1703 495 0 0 0 chrX 146548963 146549018 -20101278 + (TA)n Simple_repeat Simple_repeat 1 55 0 7 1703 396 88 0 0 chrX 146549052 146549109 -20101187 + (CATA)n Simple_repeat Simple_repeat 3 59 0 7 1703 231 36 0 0 chrX 146549114 146549142 -20101154 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 7 1703 357 24 0 0 chrX 146549219 146549261 -20101035 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1703 403 399 39 4 chrX 146550321 146550575 -20099721 + B4A SINE B4 24 286 -6 7 1703 5949 57 3 31 chrX 146551577 146552322 -20097974 - L1Md_F2 LINE L1 -1 6581 5858 8 1703 1719 30 0 0 chrX 146552324 146552521 -20097775 + L1Md_F2 LINE L1 5390 5586 -297 8 1703 7814 74 8 3 chrX 146552521 146553500 -20096796 + L1Md_F2 LINE L1 5587 6570 -12 8 1703 28839 16 3 9 chrX 146553512 146558387 -20091909 + L1Md_A LINE L1 257 5117 -766 8 1703 1308 7 0 0 chrX 146558387 146558534 -20091762 + B1_Mus2 SINE Alu 1 147 0 8 1703 28839 14 1 8 chrX 146558534 146559028 -20091268 + L1Md_A LINE L1 5118 5586 -297 8 1703 8742 18 0 0 chrX 146559028 146560024 -20090272 + L1Md_A LINE L1 5587 6582 0 8 1703 3660 43 0 0 chrX 146560049 146560490 -20089806 + L1Md_T LINE L1 6142 6582 0 8 1703 5672 23 0 0 chrX 146560496 146561147 -20089149 + L1Md_A LINE L1 5932 6582 0 8 1703 332 223 52 21 chrX 146561147 146561243 -20089053 + ETnERV2-int LTR ERVK 288 386 -2928 8 1703 5676 147 57 19 chrX 146561259 146562390 -20087906 + ETnERV2-int LTR ERVK 1071 2244 -5162 8 1703 3535 147 67 9 chrX 146562381 146563114 -20087182 + ETnERV2-int LTR ERVK 2494 3268 -4138 8 1703 2993 114 31 25 chrX 146563114 146563626 -20086670 + RLTR13D1 LTR ERVK 292 806 0 8 1703 12637 148 10 22 chrX 146563628 146565812 -20084484 + ETnERV2-int LTR ERVK 3306 5462 -1944 8 1703 7458 86 6 7 chrX 146565811 146566859 -20083437 - MMVL30-int LTR ERV1 -1151 2547 1501 8 1703 567 135 71 125 chrX 146567114 146567392 -20082904 - MMVL30-int LTR ERV1 -2187 1511 958 8 1703 4097 124 22 15 chrX 146567471 146568148 -20082148 - MMVL30-int LTR ERV1 -2245 1453 772 8 1703 201 132 0 0 chrX 146568561 146568599 -20081697 + (CAGA)n Simple_repeat Simple_repeat 2 39 0 9 1703 1294 192 189 99 chrX 146568636 146569122 -20081174 - MMVL30-int LTR ERV1 -7023 533 4 8 1703 3977 61 16 2 chrX 146569125 146569621 -20080675 - RLTR1C LTR ERV1 0 503 1 8 1703 6156 162 35 7 chrX 146569621 146570778 -20079518 - Lx2A1 LINE L1 -38 6970 5782 9 1703 12931 212 82 33 chrX 146570794 146571771 -20078525 - Lx2 LINE L1 -6 6648 5462 9 1703 2340 129 38 12 chrX 146571771 146572170 -20078126 + RLTR9E LTR ERVK 1 409 0 9 1703 12931 212 82 33 chrX 146572170 146574715 -20075581 - Lx2 LINE L1 -6 5461 2366 9 1703 1091 90 0 0 chrX 146574715 146574860 -20075436 - B1_Mus1 SINE Alu -2 146 2 9 1703 12931 212 92 9 chrX 146574860 146575946 -20074350 - Lx2 LINE L1 -3512 2365 1283 9 1703 1793 248 40 26 chrX 146575925 146576559 -20073737 - L1VL4 LINE L1 -5396 962 141 9 1703 2884 221 63 0 chrX 146576628 146577290 -20073006 - MERVK26-int LTR ERVK -4661 2258 1555 9 1703 6717 93 3 4 chrX 146577290 146578270 -20072026 + L1_Mus2 LINE L1 5587 6565 -1 9 1703 756 217 0 33 chrX 146578270 146578451 -20071845 - MERVK26-int LTR ERVK -5139 1780 1606 9 1703 2212 239 4 2 chrX 146578498 146579017 -20071279 - MERVK26-int LTR ERVK -5324 1595 1076 9 1703 876 331 3 0 chrX 146579076 146579466 -20070830 - MERVK26-int LTR ERVK -8117 842 452 9 1703 2470 169 25 29 chrX 146580227 146580704 -20069592 - MT2C_Mm LTR ERVL 0 475 1 9 1703 819 241 61 38 chrX 146581293 146581556 -20068740 - BGLII_B LTR ERVK -2 439 171 1 1703 543 236 9 0 chrX 146581617 146581723 -20068573 - B3 SINE B2 -108 108 2 1 1703 2908 102 5 2 chrX 146581758 146582160 -20068136 + RLTR9D LTR ERVK 1 403 0 1 1703 853 256 42 85 chrX 146582162 146582563 -20067733 + ETnERV2-int LTR ERVK 3 386 -2928 1 1703 8438 186 43 33 chrX 146582578 146586517 -20063779 + ETnERV2-int LTR ERVK 802 6420 -986 1 1703 374 139 27 14 chrX 146586734 146586807 -20063489 + ETnERV2-int LTR ERVK 7331 7404 -2 1 1703 2633 126 13 5 chrX 146586810 146587208 -20063088 + RLTR9D LTR ERVK 3 403 0 1 1703 371 301 35 79 chrX 146587208 146587273 -20063023 - L1_Mur3 LINE L1 -6404 1308 1246 1 1703 441 0 0 0 chrX 146587273 146587322 -20062974 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1703 371 301 35 79 chrX 146587322 146587714 -20062582 - L1_Mur3 LINE L1 -6467 1245 871 1 1703 1722 331 26 14 chrX 146587929 146588780 -20061516 + Lx7 LINE L1 6433 7293 -403 1 1703 282 148 0 18 chrX 146588792 146588847 -20061449 + Lx7 LINE L1 7627 7680 -16 1 1703 743 309 92 14 chrX 146588977 146589348 -20060948 + Lx9 LINE L1 6860 7259 -385 1 1703 417 20 0 0 chrX 146589625 146589675 -20060621 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1703 3710 143 32 8 chrX 146589774 146590497 -20059799 - MTB-int LTR MaLR -506 752 1 1 1703 2725 99 18 5 chrX 146590497 146590892 -20059404 - MTB LTR MaLR 0 400 1 1 1703 287 301 119 5 chrX 146591103 146591297 -20058999 + L1M5 LINE L1 5606 5821 -358 1 1703 564 84 0 0 chrX 146591804 146591887 -20058409 + (CA)n Simple_repeat Simple_repeat 1 83 0 1 1703 663 25 0 0 chrX 146592932 146593013 -20057283 + (TG)n Simple_repeat Simple_repeat 2 82 0 1 1703 808 87 0 17 chrX 146593245 146593362 -20056934 - B1_Mus1 SINE Alu 0 148 34 1 1703 583 168 139 31 chrX 146594169 146594221 -20056075 - B1_Mus2 SINE Alu 0 147 98 1 1703 258 32 0 0 chrX 146594221 146594252 -20056044 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 1 1703 447 19 0 0 chrX 146594252 146594303 -20055993 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 1703 583 168 139 31 chrX 146594303 146594378 -20055918 - B1_Mus2 SINE Alu -50 97 6 1 1703 233 282 124 37 chrX 146594517 146594734 -20055562 + L1MA4 LINE L1 5708 5943 -357 1 1703 1234 160 24 0 chrX 146594858 146595070 -20055226 - ORR1A2 LTR MaLR -110 217 1 1 1703 189 359 91 32 chrX 146595237 146595424 -20054872 + L2a LINE L2 2978 3175 -251 1 1703 285 314 16 41 chrX 146595425 146595438 -20054858 + ID SINE ID 70 79 -145 1 1703 636 259 7 21 chrX 146595438 146595580 -20054716 + B1_Mur4 SINE Alu 2 141 -9 1 1703 3228 216 52 15 chrX 146595633 146596515 -20053781 + Lx9 LINE L1 6723 7637 -7 1 1703 1285 27 0 0 chrX 146597338 146597485 -20052811 + B1_Mm SINE Alu 1 147 0 1 1703 190 106 0 41 chrX 146597487 146597536 -20052760 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 1 1703 1811 261 52 15 chrX 146597808 146598348 -20051948 - Lx6 LINE L1 -13 7447 6888 1 1703 235 261 29 0 chrX 146599145 146599214 -20051082 - ID4_ SINE ID -11 72 2 1 1703 289 319 55 36 chrX 146600098 146600451 -20049845 + Lx8 LINE L1 6993 7304 -340 1 1703 418 326 21 7 chrX 146600829 146600971 -20049325 - B1F SINE Alu -1 148 5 1 1703 26741 103 38 12 chrX 146602570 146608185 -20042111 + L1Md_F2 LINE L1 457 6184 -398 1 1703 1346 292 79 11 chrX 146609467 146610011 -20040285 + Lx6 LINE L1 6853 7433 -27 1 1703 365 348 39 35 chrX 146610377 146610663 -20039633 - MLT1E2 LTR MaLR -3 624 338 1 1703 353 268 133 39 chrX 146610956 146611084 -20039212 - B1_Mur2 SINE Alu 0 149 10 1 1703 405 0 0 0 chrX 146612234 146612279 -20038017 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1703 543 303 20 20 chrX 146612284 146612486 -20037810 - ID_B1 SINE B4 -22 202 1 1 1703 214 263 0 0 chrX 146613288 146613345 -20036951 + (TATATG)n Simple_repeat Simple_repeat 6 62 0 1 1703 356 104 0 15 chrX 146614919 146614987 -20035309 + (TC)n Simple_repeat Simple_repeat 2 68 0 1 1703 467 333 89 42 chrX 146615314 146615765 -20034531 + L1_Mur3 LINE L1 67 538 -7190 1 1703 413 276 35 40 chrX 146615802 146615976 -20034320 + L1_Mur3 LINE L1 100 272 -7440 1 1703 417 250 8 0 chrX 146616002 146616122 -20034174 + L1_Mur3 LINE L1 860 980 -6748 1 1703 296 304 117 42 chrX 146616150 146616363 -20033933 - RMER17B LTR ERVK -43 915 687 1 1703 1374 269 89 57 chrX 146616365 146617118 -20033178 - RMER17B LTR ERVK -183 775 11 1 1703 1678 223 48 0 chrX 146617131 146617741 -20032555 + L1_Mur3 LINE L1 984 1618 -4262 1 1703 18420 139 8 25 chrX 146617797 146621837 -20028459 - L1_Mus3 LINE L1 -7 6631 2669 1 1703 36862 32 1 8 chrX 146621836 146626850 -20023446 + L1Md_T LINE L1 615 5585 -298 1 1703 8363 42 2 0 chrX 146626851 146627845 -20022451 + L1Md_T LINE L1 5587 6582 0 1 1703 2573 127 20 2 chrX 146627853 146628262 -20022034 - MusHAL1 LINE L1 -1231 1481 1066 1 1703 4520 14 0 0 chrX 146628262 146628755 -20021541 + MT2_Mm LTR ERVL 1 493 0 1 1703 41382 18 8 1 chrX 146628755 146634042 -20016254 + MERVL-int LTR ERVL 1 5360 -125 1 1703 362 167 46 35 chrX 146634042 146634129 -20016167 + ORR1A3-int LTR MaLR 553 640 -1323 1 1703 321 0 0 0 chrX 146634129 146634167 -20016129 + MERVL-int LTR ERVL 5448 5485 0 1 1703 4520 14 0 0 chrX 146634167 146634660 -20015636 + MT2_Mm LTR ERVL 1 493 0 1 1703 6604 189 53 38 chrX 146634660 146636853 -20013443 - L1_Mus3 LINE L1 -3609 2274 220 1 1703 7044 30 11 0 chrX 146637150 146637944 -20012352 + RLTR13B4 LTR ERVK 1 803 0 1 1703 6169 78 30 5 chrX 146638181 146639014 -20011282 + L1Md_F2 LINE L1 5729 6582 0 1 1703 219 114 0 0 chrX 146639017 146639052 -20011244 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1703 479 256 72 0 chrX 146639757 146639882 -20010414 + B1F1 SINE Alu 2 135 -14 1 1703 408 104 0 0 chrX 146639923 146639990 -20010306 + (CAGA)n Simple_repeat Simple_repeat 4 70 0 1 1703 3820 168 79 91 chrX 146640127 146641042 -20009254 + RMER17A2 LTR ERVK 1 904 -2 1 1703 1110 263 30 40 chrX 146641171 146641543 -20008753 - ORR1D1 LTR MaLR 0 374 7 1 1703 347 204 296 0 chrX 146642238 146642346 -20007950 + PB1D9 SINE Alu 8 147 -1 1 1703 1156 235 212 57 chrX 146642985 146643791 -20006505 + Lx9 LINE L1 6569 7516 -128 1 1703 261 0 0 0 chrX 146643791 146643820 -20006476 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1703 1004 251 113 83 chrX 146643820 146643957 -20006339 + Lx9 LINE L1 7517 7641 -3 1 1703 6390 105 0 3 chrX 146644008 146645240 -20005056 + L1Md_F LINE L1 386 1617 -4266 1 1703 18128 134 26 59 chrX 146645240 146650161 -20000135 + L1Md_F2 LINE L1 392 5147 -736 1 1703 700 98 0 0 chrX 146650159 146650251 -20000045 + L1Md_F2 LINE L1 5494 5585 -298 1 1703 7578 65 18 12 chrX 146650252 146651242 -19999054 + L1Md_F2 LINE L1 5587 6582 0 1 1703 4258 117 15 142 chrX 146652511 146653438 -19996858 - RMER17D2 LTR ERVK 0 809 1 1 1703 5318 155 64 58 chrX 146653510 146654645 -19995651 - RMER17A-int LTR ERVK -117 1611 470 1 1703 640 219 52 57 chrX 146654783 146654977 -19995319 - RMER17A-int LTR ERVK -1533 195 3 1 1703 431 164 306 9 chrX 146655117 146655228 -19995068 + B1_Mus1 SINE Alu 5 148 0 1 1703 22 56 0 0 chrX 146655290 146655326 -19994970 + AT_rich Low_complexity Low_complexity 1 36 0 1 1703 1636 171 59 66 chrX 146658396 146658835 -19991461 - LTRIS5 LTR ERV1 -11 436 1 1 1703 306 107 12 0 chrX 146658835 146658888 -19991408 - MuRRS4-int LTR ERV1 0 7778 7737 1 1703 256 32 0 0 chrX 146659183 146659214 -19991082 - MuRRS4-int LTR ERV1 -229 4834 4804 1 1703 2161 183 72 22 chrX 146659220 146660243 -19990053 - MuRRS4-int LTR ERV1 -1251 3812 2417 1 1703 1565 81 0 0 chrX 146660245 146660443 -19989853 - MuRRS4-int LTR ERV1 -2569 2494 2297 1 1703 1697 222 43 23 chrX 146660439 146661242 -19989054 - MuRRS4-int LTR ERV1 -2909 2154 1178 1 1703 3709 129 120 70 chrX 146661281 146661681 -19988615 - RMER16-int LTR ERVK -3968 1438 981 1 1703 1235 48 0 0 chrX 146661681 146661828 -19988468 + B1_Mus2 SINE Alu 1 147 0 1 1703 3709 129 120 70 chrX 146661828 146662153 -19988143 - RMER16-int LTR ERVK -4426 980 677 1 1703 855 151 101 12 chrX 146662142 146662310 -19987986 - RMER16-int LTR ERVK -5083 323 141 1 1703 1182 153 73 56 chrX 146663067 146663446 -19986850 - LTRIS5 LTR ERV1 -15 432 1 1 1703 19114 51 8 0 chrX 146663518 146666605 -19983691 - L1Md_F3 LINE L1 -14 6570 3464 1 1703 2601 67 0 3 chrX 146666604 146666963 -19983333 - L1Md_F3 LINE L1 -3702 2181 1824 1 212 36094 36 1 0 chrX 146666961 146672291 -19978005 - L1Md_A LINE L1 0 6582 1249 1 1704 5839 134 13 3 chrX 146672291 146673508 -19976788 - L1Md_F3 LINE L1 -4422 1461 232 1 1704 1682 327 41 58 chrX 146673551 146674619 -19975677 + Lx8 LINE L1 6424 7473 0 1 1704 257 354 13 58 chrX 146675849 146676005 -19974291 + B1F1 SINE Alu 1 149 0 1 1704 703 155 0 37 chrX 146676186 146676347 -19973949 + RMER17B LTR ERVK 309 463 -495 1 1704 749 249 154 106 chrX 146678266 146678662 -19971634 - RMER17D2 LTR ERVK -541 417 11 1 1704 7906 239 33 58 chrX 146678675 146680046 -19970250 + L1_Mur3 LINE L1 984 2351 -3529 1 1704 335 109 0 35 chrX 146680046 146680103 -19970193 + U5 snRNA snRNA 1 55 -61 1 1704 7906 239 33 58 chrX 146680103 146681295 -19969001 + L1_Mur3 LINE L1 2352 3543 -2337 1 1704 3114 51 3 5 chrX 146681295 146681687 -19968609 + L1Md_F2 LINE L1 6177 6567 -15 1 1704 7906 239 31 63 chrX 146681687 146682311 -19967985 + L1_Mur3 LINE L1 3544 4136 -1744 1 1704 1115 244 61 38 chrX 146682315 146682669 -19967627 + RLTR26 LTR ERVK 5 399 -243 1 1704 6599 231 20 38 chrX 146682894 146684659 -19965637 + MERVK26-int LTR ERVK 47 1780 -5139 1 1704 5442 103 21 13 chrX 146684659 146685514 -19964782 - L1_Mus2 LINE L1 -1 6565 5704 1 1704 234 91 0 0 chrX 146685515 146685548 -19964748 + (T)n Simple_repeat Simple_repeat 1 33 0 1 1704 3633 73 4 2 chrX 146685571 146686053 -19964243 - L1Md_F2 LINE L1 0 6582 6100 1 1704 4071 44 0 0 chrX 146686053 146686535 -19963761 - LTRIS_Mm LTR ERV1 0 482 1 1 1704 24620 65 23 25 chrX 146686535 146690010 -19960286 - MuRRS-int LTR ERV1 0 4690 1224 1 1704 1986 66 0 0 chrX 146690010 146690268 -19960028 - L1_Mm LINE L1 -93 5790 5533 1 1704 2388 75 0 0 chrX 146690265 146690597 -19959699 - L1_Mm LINE L1 -1070 4813 4482 1 1704 973 112 0 0 chrX 146690595 146690747 -19959549 - L1_Mm LINE L1 -2331 3552 3401 1 1704 6122 79 25 1 chrX 146690747 146691643 -19958653 - L1_Mm LINE L1 -2715 3168 2252 1 1704 2606 66 3 6 chrX 146691654 146692003 -19958293 + L1Md_F2 LINE L1 6230 6577 -5 1 1704 190 106 21 21 chrX 146692008 146692056 -19958240 + (TAAAAA)n Simple_repeat Simple_repeat 2 49 0 1 1704 3235 194 27 35 chrX 146692072 146693940 -19956356 + MERVK26-int LTR ERVK 2362 4085 -3321 1 1704 443 73 44 0 chrX 146694302 146694370 -19955926 + MERVK26-int LTR ERVK 7331 7401 -5 1 1704 1836 151 72 90 chrX 146694379 146694779 -19955517 + RLTR9C LTR ERVK 1 393 0 1 1704 18352 84 1 12 chrX 146696287 146699694 -19950602 - L1Md_F2 LINE L1 -2 6580 3215 1 1704 2507 86 0 15 chrX 146699694 146700083 -19950213 - L1Md_F2 LINE L1 -3625 2258 1876 1 1704 3601 121 44 33 chrX 146700078 146700737 -19949559 - L1Md_F2 LINE L1 -5390 1226 561 1 1704 241 280 27 0 chrX 146704300 146704375 -19945921 + ID4 SINE ID 1 77 -6 1 1704 306 0 0 0 chrX 146705173 146705207 -19945089 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1704 600 321 98 16 chrX 146705260 146705688 -19944608 - Lx9 LINE L1 -319 7325 6863 1 1704 7436 157 45 4 chrX 146705946 146707709 -19942587 - Lx2 LINE L1 0 6997 5155 1 1704 1536 152 11 11 chrX 146707709 146707988 -19942308 - L1_Mus4 LINE L1 -11 6625 6347 1 1704 4525 193 29 3 chrX 146707988 146708264 -19942032 - Lx2 LINE L1 -732 5154 4879 1 1704 1159 130 5 0 chrX 146708271 146708455 -19941841 + Lx LINE L1 6346 6530 -124 1 1704 2435 208 90 75 chrX 146708456 146709147 -19941149 + RMER17B LTR ERVK 1 701 -257 1 1704 8655 188 19 7 chrX 146709147 146709256 -19941040 - Lx2 LINE L1 -1268 4618 4510 1 1704 180 0 0 0 chrX 146709256 146709276 -19941020 + (TAA)n Simple_repeat Simple_repeat 3 22 0 1 1704 8655 188 19 7 chrX 146709276 146709567 -19940729 - Lx2 LINE L1 -1377 4509 4200 1 1704 405 0 0 0 chrX 146709567 146709612 -19940684 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1704 8655 188 19 7 chrX 146709612 146711184 -19939112 - Lx2 LINE L1 -1687 4199 2624 1 1704 28139 123 11 13 chrX 146711175 146717100 -19933196 + L1_Mus2 LINE L1 660 6565 -1 1 1704 1526 180 24 3 chrX 146717107 146717435 -19932861 + L1_Mur2 LINE L1 5063 5397 -480 1 1704 1764 299 45 39 chrX 146717550 146718287 -19932009 - RodERV21-int LTR ERV1 -3146 1845 1105 1 1704 660 296 34 62 chrX 146718355 146718647 -19931649 - RodERV21-int LTR ERV1 -3913 1078 795 1 1704 2356 46 58 0 chrX 146718652 146718977 -19931319 - L1_Mus1 LINE L1 -505 6062 5719 1 1704 4087 62 2 0 chrX 146718977 146719489 -19930807 + L1_Mus1 LINE L1 6053 6565 -2 1 1704 286 261 51 90 chrX 146719539 146719695 -19930601 - RMER17C-int LTR ERVK -2714 524 375 1 1704 453 207 66 8 chrX 146720618 146720740 -19929556 + L1_Mur2 LINE L1 5384 5512 -365 1 1704 254 292 106 67 chrX 146721109 146721271 -19929025 - RLTR26 LTR ERVK -133 494 318 1 1704 389 373 22 22 chrX 146721717 146721898 -19928398 - RLTR26 LTR ERVK -287 355 175 1 1704 450 0 0 0 chrX 146721908 146721958 -19928338 + (TTA)n Simple_repeat Simple_repeat 1 50 0 1 1704 347 136 0 15 chrX 146721958 146722025 -19928271 - Lx2A LINE L1 -18 6990 6925 2 1704 5440 182 21 16 chrX 146722026 146723237 -19927059 - Lx2A LINE L1 -40 6968 5813 2 1704 7386 97 21 1 chrX 146723245 146724406 -19925890 - L1_Mus3 LINE L1 0 6638 5455 2 1704 10367 167 14 4 chrX 146724403 146726324 -19923972 - L1_Mur1 LINE L1 -1726 4160 2222 2 1704 2495 191 8 0 chrX 146726316 146726875 -19923421 - L1VL4 LINE L1 -2493 1066 501 2 1704 7333 77 3 0 chrX 146727172 146729034 -19921262 + L1Md_F LINE L1 350 2217 -3666 2 1704 4047 109 5 12 chrX 146729029 146729767 -19920529 - L1VL4 LINE L1 -2076 1483 753 2 1704 27174 71 77 1 chrX 146729762 146734232 -19916064 - L1Md_F2 LINE L1 0 6585 1753 2 1704 6203 81 4 24 chrX 146734228 146735227 -19915069 - L1Md_F2 LINE L1 -4487 1399 317 2 1704 2454 181 61 55 chrX 146735224 146735817 -19914479 - L1Md_F LINE L1 -5429 1090 88 2 1704 8079 101 23 4 chrX 146735823 146737083 -19913213 - L1VL4 LINE L1 -1454 2105 834 2 1704 810 128 13 51 chrX 146737083 146737240 -19913056 - L1_Mus3 LINE L1 -7 6631 6481 2 1704 4540 130 34 58 chrX 146737240 146737886 -19912410 - L1VL4 LINE L1 -5469 833 193 2 1704 2169 319 32 20 chrX 146737886 146739172 -19911124 - MYSERV6-int LTR ERVK -7161 1798 191 2 1704 2840 124 229 0 chrX 146739935 146740410 -19909886 - MT2B2 LTR ERVL 0 584 1 2 1704 833 244 56 34 chrX 146741000 146741267 -19909029 - BGLII_B LTR ERVK -2 439 167 2 1704 560 226 10 0 chrX 146741328 146741430 -19908866 - B3 SINE B2 -112 104 2 2 1704 604 293 19 94 chrX 146741456 146741934 -19908362 - L1_Mur3 LINE L1 -6400 1312 871 2 1704 2226 317 29 15 chrX 146742149 146742998 -19907298 + Lx7 LINE L1 6433 7293 -403 2 1704 313 132 0 19 chrX 146743010 146743064 -19907232 + Lx7 LINE L1 7627 7679 -17 2 1704 865 305 109 16 chrX 146743198 146743621 -19906675 + Lx9 LINE L1 6860 7321 -323 2 1704 289 305 0 12 chrX 146743940 146744023 -19906273 - ID4_ SINE ID 0 83 2 2 1704 3111 93 5 2 chrX 146744133 146744530 -19905766 - MTB LTR MaLR -2 398 1 2 1704 6527 131 20 77 chrX 146744530 146745694 -19904602 - MTB-int LTR MaLR 0 1098 1 2 1704 3102 98 5 2 chrX 146745694 146746093 -19904203 - MTB LTR MaLR 0 400 1 2 1704 435 309 111 12 chrX 146746211 146746447 -19903849 + L1MD LINE L1 5573 5821 -343 2 1704 724 63 18 0 chrX 146746948 146747059 -19903237 + (CA)n Simple_repeat Simple_repeat 1 113 0 2 1704 218 224 0 17 chrX 146748073 146748132 -19902164 + T-rich Low_complexity Low_complexity 3 60 0 2 1704 779 137 15 22 chrX 146748353 146748487 -19901809 - B1_Mus2 SINE Alu 0 147 15 2 1704 212 163 0 0 chrX 146749258 146749301 -19900995 + T-rich Low_complexity Low_complexity 1 43 0 2 1704 606 163 156 39 chrX 146749303 146749359 -19900937 - B1_Mus2 SINE Alu 0 147 96 2 1704 986 92 0 7 chrX 146749359 146749512 -19900784 + (TCTCCC)n Simple_repeat Simple_repeat 3 154 0 2 1704 606 163 156 39 chrX 146749512 146749583 -19900713 - B1_Mus2 SINE Alu -52 95 5 2 1704 1255 156 24 0 chrX 146750060 146750272 -19900024 - ORR1A2 LTR MaLR -110 217 1 2 1704 203 372 77 20 chrX 146750438 146750633 -19899663 + L2a LINE L2 2978 3183 -243 2 1704 643 248 7 21 chrX 146750639 146750779 -19899517 + B1_Mur4 SINE Alu 2 139 -11 2 1704 3602 209 55 12 chrX 146750809 146751705 -19898591 + Lx9 LINE L1 6703 7636 -8 2 1704 1855 253 55 48 chrX 146752766 146753334 -19896962 - Lx6 LINE L1 -1 7459 6888 2 1704 273 280 13 0 chrX 146754135 146754210 -19896086 - ID4 SINE ID -6 77 2 2 1704 375 360 38 33 chrX 146755095 146755643 -19894653 + Lx9 LINE L1 7074 7624 -20 2 1704 388 296 54 31 chrX 146755824 146755953 -19894343 - B1F1 SINE Alu -5 144 13 2 1704 22915 29 277 10 chrX 146756576 146760484 -19889812 + L1Md_T LINE L1 643 5586 -297 2 1704 9474 7 2 0 chrX 146760484 146761478 -19888818 + L1Md_T LINE L1 5587 6582 0 2 1704 320 43 0 21 chrX 146761509 146761556 -19888740 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 2 1704 11190 47 0 5 chrX 146761706 146763116 -19887180 + L1Md_F2 LINE L1 1952 3354 -2529 2 1704 1508 64 5 0 chrX 146763113 146763301 -19886995 - L1Md_F2 LINE L1 -581 6001 5813 2 1704 6303 21 3 0 chrX 146763293 146764011 -19886285 + L1Md_F2 LINE L1 4867 5586 -297 2 1704 8246 44 22 26 chrX 146764011 146765011 -19885285 + L1Md_F2 LINE L1 5587 6582 0 2 1704 185 167 13 53 chrX 146766606 146766682 -19883614 + T-rich Low_complexity Low_complexity 2 74 0 2 1704 190 143 35 35 chrX 146766741 146766799 -19883497 + CT-rich Low_complexity Low_complexity 3 60 0 2 1704 544 204 10 10 chrX 146766824 146766928 -19883368 - B1_Mur4 SINE Alu -13 137 34 2 1704 1500 293 77 15 chrX 146768461 146769008 -19881288 + Lx6 LINE L1 6853 7433 -27 2 1704 277 351 39 35 chrX 146769379 146769665 -19880631 - MLT1E2 LTR MaLR -3 624 338 2 1704 349 255 123 0 chrX 146769965 146770071 -19880225 - B1_Mur2 SINE Alu -2 147 29 2 1704 441 50 0 0 chrX 146771219 146771279 -19879017 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 1704 477 0 0 0 chrX 146771285 146771338 -19878958 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 1704 381 22 0 0 chrX 146771338 146771383 -19878913 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1704 530 286 39 29 chrX 146771384 146771589 -19878707 - ID_B1 SINE B4 -17 207 1 2 1704 776 181 6 0 chrX 146772405 146772571 -19877725 + (TA)n Simple_repeat Simple_repeat 2 168 0 2 1704 279 0 0 0 chrX 146772571 146772602 -19877694 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1704 585 0 0 0 chrX 146774231 146774296 -19876000 + (TC)n Simple_repeat Simple_repeat 2 66 0 2 1704 570 335 85 40 chrX 146774641 146775316 -19874980 + L1_Mur3 LINE L1 17 754 -6974 2 1704 371 256 16 8 chrX 146775347 146775469 -19874827 + L1_Mur3 LINE L1 865 987 -6741 2 1704 1738 246 153 81 chrX 146775485 146776463 -19873833 - RMER17B LTR ERVK -11 897 8 2 1704 10824 211 50 24 chrX 146776473 146779542 -19870754 + L1_Mur3 LINE L1 984 4129 -1751 2 1704 986 253 70 56 chrX 146779553 146779945 -19870351 + RLTR26 LTR ERVK 5 438 -204 2 1704 232 293 0 79 chrX 146780005 146780094 -19870202 + RLTR26 LTR ERVK 561 642 0 2 1704 2327 193 44 21 chrX 146780096 146780573 -19869723 + MERVK26-int LTR ERVK 3 490 -6429 2 1704 2691 109 14 0 chrX 146780575 146780998 -19869298 + MusHAL1 LINE L1 39 467 -2245 2 1704 1121 164 4 121 chrX 146781000 146781195 -19869101 + MusHAL1 LINE L1 1473 1662 -1050 2 1704 576 0 0 0 chrX 146781195 146781259 -19869037 + (GAAA)n Simple_repeat Simple_repeat 3 66 0 2 1704 1121 164 4 121 chrX 146781259 146781327 -19868969 + MusHAL1 LINE L1 1663 1705 -1007 2 1704 25 0 0 0 chrX 146781483 146781508 -19868788 + AT_rich Low_complexity Low_complexity 1 25 0 2 1704 440 249 15 15 chrX 146781540 146781687 -19868609 + L1_Mus4 LINE L1 666 785 -5831 2 1704 6126 145 26 63 chrX 146781716 146783015 -19867281 + L1_Mus4 LINE L1 504 1728 -4155 2 1704 4585 160 22 44 chrX 146783015 146783922 -19866374 + RMER17D LTR ERVK 1 887 -2 2 1704 6126 104 12 17 chrX 146783922 146784406 -19865890 + L1_Mus4 LINE L1 1729 2203 -3680 2 1704 686 172 0 0 chrX 146784392 146784520 -19865776 + L1_Mus4 LINE L1 2305 2432 -3451 2 1704 16356 118 8 49 chrX 146784502 146787133 -19863163 - L1VL1 LINE L1 -2173 3710 1109 2 1704 952 48 8 0 chrX 146787133 146787258 -19863038 + B1_Mus2 SINE Alu 22 147 0 2 1704 16356 118 8 49 chrX 146787258 146787968 -19862328 - L1VL1 LINE L1 -2173 1108 405 2 1704 12887 164 13 81 chrX 146787958 146790737 -19859559 + L1_Mus4 LINE L1 2881 5470 -413 2 1704 5653 128 48 21 chrX 146790735 146791656 -19858640 + L1_Mus4 LINE L1 5690 6635 -1 2 1704 656 189 30 91 chrX 146791649 146791847 -19858449 + Lx5 LINE L1 4452 4638 -1242 2 1704 201 121 0 0 chrX 146791861 146791894 -19858402 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1704 421 111 0 16 chrX 146791922 146791937 -19858359 + L1_Mus1 LINE L1 6128 6142 -425 2 1704 3196 70 0 8 chrX 146791937 146792328 -19857968 - L1Md_F2 LINE L1 -11 6571 6184 2 1704 433 21 0 0 chrX 146792328 146792376 -19857920 + L1Md_F2 LINE L1 6150 6197 -385 2 1704 2482 228 40 38 chrX 146792370 146793486 -19856810 + Lx5 LINE L1 4638 6349 -701 2 1704 1087 335 49 47 chrX 146793500 146794035 -19856261 + Lx5 LINE L1 6484 7019 -31 2 1704 3284 235 63 9 chrX 146794060 146795193 -19855103 + Lx6 LINE L1 5282 6491 -969 2 1704 2029 141 22 6 chrX 146795193 146795508 -19854788 - RLTR46 LTR ERVK 0 320 1 2 26 32627 101 29 4 chrX 146795508 146801136 -19849160 - MMERVK10C-int LTR ERVK 0 7680 1885 2 1705 352 158 18 0 chrX 146801138 146801195 -19849101 - MMERVK10C-int LTR ERVK -5142 995 938 2 1705 382 125 258 77 chrX 146801317 146801463 -19848833 - MMERVK10C-int LTR ERVK -5658 479 348 2 1705 442 192 6 202 chrX 146801463 146801789 -19848507 - LSU-rRNA_Hsa rRNA rRNA -4350 685 424 2 1705 704 147 340 5 chrX 146801833 146802024 -19848272 - MMVL30-int LTR ERV1 -2335 1363 1109 2 1705 641 185 95 12 chrX 146802451 146802633 -19847663 - MMERVK10C-int LTR ERVK -6621 1059 878 2 1705 287 246 26 60 chrX 146802714 146802831 -19847465 - MMERVK10C-int LTR ERVK -7567 113 1 2 1705 1956 153 22 6 chrX 146802831 146803146 -19847150 - RLTR46 LTR ERVK 0 320 1 2 1705 2747 265 34 11 chrX 146803186 146803938 -19846358 + Lx6 LINE L1 6288 7538 -158 2 1705 11055 75 4 3 chrX 146803952 146806107 -19844189 - L1Md_F2 LINE L1 0 6582 4427 2 1705 9736 67 6 3 chrX 146806105 146808038 -19842258 - L1Md_F2 LINE L1 0 6582 4647 2 1705 37602 48 7 4 chrX 146808016 146814226 -19836070 - L1Md_T LINE L1 0 6585 265 2 1705 403 117 0 0 chrX 146814221 146814281 -19836015 - L1Md_F2 LINE L1 -1206 4677 4618 2 1705 24014 92 9 7 chrX 146814281 146818440 -19831856 - L1Md_F2 LINE L1 -1502 4381 213 2 1705 330 270 69 55 chrX 146818443 146818588 -19831708 + Lx6 LINE L1 7314 7460 0 2 1705 4478 42 6 6 chrX 146818672 146819199 -19831097 + L1Md_F2 LINE L1 6055 6581 -1 2 1705 411 21 0 0 chrX 146819247 146819295 -19831001 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1705 12912 91 10 28 chrX 146820335 146822270 -19828026 - L1_Mur1 LINE L1 -1651 4235 2337 2 1705 903 28 0 0 chrX 146822340 146822448 -19827848 + L1_Mus1 LINE L1 6458 6565 -2 2 1705 280 344 97 31 chrX 146823246 146823474 -19826822 - B4 SINE B4 -49 243 1 2 1705 321 140 0 0 chrX 146823580 146823637 -19826659 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 2 1705 5462 102 61 31 chrX 146823822 146824685 -19825611 + RMER17D LTR ERVK 1 889 0 2 1705 365 271 73 85 chrX 146824994 146825159 -19825137 + RSINE1 SINE B4 3 165 0 2 1705 260 288 0 0 chrX 146826484 146826550 -19823746 + B4A SINE B4 216 281 -11 2 1705 356 308 6 83 chrX 146826990 146827146 -19823150 + B1_Mur3 SINE Alu 6 149 0 2 1705 344 268 36 60 chrX 146827056 146827223 -19823073 - RMER17D LTR ERVK -355 534 372 2 1705 540 45 0 0 chrX 146827935 146828002 -19822294 + (TA)n Simple_repeat Simple_repeat 1 67 0 2 1705 244 204 37 0 chrX 146828039 146828093 -19822203 + (CATA)n Simple_repeat Simple_repeat 4 59 0 2 1705 330 26 0 0 chrX 146828203 146828242 -19822054 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1705 2979 49 3 3 chrX 146828688 146829034 -19821262 + ORR1A0 LTR MaLR 1 346 0 2 1705 523 390 15 4 chrX 146829648 146829908 -19820388 + B4A SINE B4 24 286 -6 2 1705 198 103 0 0 chrX 146831558 146831587 -19818709 + (GAAAA)n Simple_repeat Simple_repeat 3 31 0 2 1705 231 88 0 0 chrX 146833466 146833500 -19816796 + (GAGAA)n Simple_repeat Simple_repeat 4 37 0 2 1705 4604 161 65 29 chrX 146833526 146834396 -19815900 + RLTR13D6 LTR ERVK 1 902 0 2 1705 329 233 113 28 chrX 146834398 146834504 -19815792 + MIRb SINE MIR 126 240 -28 2 1705 1634 68 21 0 chrX 146837166 146837402 -19812894 - MTB LTR MaLR -159 241 1 2 1705 258 341 69 8 chrX 146838110 146838240 -19812056 - B1F SINE Alu 0 149 12 2 1705 258 183 0 0 chrX 146838265 146838336 -19811960 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 1705 287 303 64 24 chrX 146839767 146839892 -19810404 - B1F1 SINE Alu -5 144 15 2 1705 212 295 49 69 chrX 146841880 146841982 -19808314 + B1_Mur4 SINE Alu 49 148 -2 3 1705 273 257 14 0 chrX 146842053 146842123 -19808173 + B1F2 SINE Alu 58 128 -21 3 1705 489 34 0 0 chrX 146842143 146842202 -19808094 + (GGGGA)n Simple_repeat Simple_repeat 3 61 0 3 1705 210 180 0 0 chrX 146842202 146842263 -19808033 + GA-rich Low_complexity Low_complexity 2 62 0 3 1705 334 297 52 35 chrX 146842287 146842402 -19807894 - RSINE1 SINE B4 -41 124 8 3 1705 330 282 96 81 chrX 146844218 146844461 -19805835 - MIRc SINE MIR -15 253 6 3 1705 249 305 0 0 chrX 146844940 146844999 -19805297 + ID4_ SINE ID 3 61 -22 3 1705 297 75 0 0 chrX 146845428 146845468 -19804828 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 3 1705 438 268 107 35 chrX 146845730 146845927 -19804369 + ID_B1 SINE B4 1 211 -13 3 1705 561 232 70 31 chrX 146846156 146846285 -19804011 + B1F1 SINE Alu 2 135 -14 3 1705 378 0 0 0 chrX 146846294 146846336 -19803960 + (CAGA)n Simple_repeat Simple_repeat 2 43 0 3 1705 1495 224 30 22 chrX 146846646 146847011 -19803285 - ORR1D1 LTR MaLR 0 374 7 3 1705 444 174 276 9 chrX 146847706 146847822 -19802474 + PB1D9 SINE Alu 1 147 -1 3 1705 1483 238 176 26 chrX 146848475 146849290 -19801006 + Lx9 LINE L1 6569 7515 -129 3 1705 597 61 0 0 chrX 146849290 146849372 -19800924 + (TG)n Simple_repeat Simple_repeat 2 83 0 3 1705 1232 239 141 25 chrX 146849372 146849488 -19800808 + Lx9 LINE L1 7516 7634 -10 3 1705 715 306 40 32 chrX 146851277 146851626 -19798670 - MTD LTR MaLR -20 399 64 3 1705 524 150 298 9 chrX 146852073 146852187 -19798109 + B1_Mus1 SINE Alu 2 148 0 3 1705 2667 300 93 33 chrX 146852339 146853225 -19797071 + Lx8 LINE L1 6211 7165 -308 3 1705 192 40 0 0 chrX 146853225 146853250 -19797046 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 3 1705 2667 300 93 33 chrX 146853250 146853554 -19796742 + Lx8 LINE L1 7166 7472 -1 3 1705 369 250 90 83 chrX 146855523 146855667 -19794629 + B1F SINE Alu 1 145 -4 3 1705 3833 86 0 2 chrX 146857771 146858284 -19792012 - L1_Mus1 LINE L1 -1190 4693 4182 3 1705 8920 77 21 1 chrX 146858280 146860131 -19790165 + L1_Mus1 LINE L1 4679 6567 0 3 1705 629 247 277 77 chrX 146861126 146861342 -19788954 + B4A SINE B4 1 259 -33 3 1705 287 203 62 0 chrX 146861341 146861405 -19788891 + B1F SINE Alu 68 135 -14 3 1705 454 248 9 9 chrX 146861485 146861595 -19788701 + MurSatRep1 Unknown Unknown 619 728 -1409 3 1705 1128 81 25 0 chrX 146862534 146862695 -19787601 - URR1A DNA MER1_type 0 226 62 3 1705 1382 111 17 0 chrX 146862837 146863018 -19787278 - B2_Mm2 SINE B2 -8 187 4 3 1705 367 274 26 9 chrX 146863316 146863430 -19786866 + BC1_Mm scRNA scRNA 2 117 -35 3 1705 441 292 59 39 chrX 146863862 146864015 -19786281 + RSINE1 SINE B4 4 159 -6 3 1705 1015 215 19 29 chrX 146864072 146864278 -19786018 - B3 SINE B2 -8 208 5 3 1705 25 31 0 0 chrX 146864284 146864316 -19785980 + AT_rich Low_complexity Low_complexity 1 32 0 3 1705 289 183 126 7 chrX 146864892 146864954 -19785342 + B1F SINE Alu 17 81 -39 3 1705 230 269 83 69 chrX 146864900 146864972 -19785324 + B4A SINE B4 106 178 -114 3 1705 5187 55 0 25 chrX 146865327 146865964 -19784332 + L1Md_F2 LINE L1 5959 6579 -3 3 1705 354 23 0 0 chrX 146866601 146866644 -19783652 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1705 544 235 122 35 chrX 146866661 146866833 -19783463 + B3 SINE B2 3 189 -27 3 1705 747 91 127 0 chrX 146866840 146866950 -19783346 + B1_Mus1 SINE Alu 24 147 -1 3 1705 827 153 7 0 chrX 146866950 146867100 -19783196 + GA-rich Low_complexity Low_complexity 2 152 0 3 1705 1583 116 4 4 chrX 146867517 146867759 -19782537 - Lx4A LINE L1 -433 5444 5203 3 1705 9432 109 30 15 chrX 146867758 146869322 -19780974 + Lx4A LINE L1 5445 7056 -2 3 1705 22 35 0 0 chrX 146871923 146871952 -19778344 + AT_rich Low_complexity Low_complexity 1 29 0 3 1705 823 146 0 68 chrX 146872246 146872393 -19777903 + B1_Mus2 SINE Alu 11 147 0 3 1705 270 247 54 22 chrX 146872571 146872683 -19777613 + B1F1 SINE Alu 1 117 0 3 1705 232 288 17 0 chrX 146873449 146873508 -19776788 + tRNA-Ala-GCA tRNA tRNA 7 66 -9 3 1705 22 35 0 0 chrX 146873968 146873997 -19776299 + AT_rich Low_complexity Low_complexity 1 29 0 3 1705 252 277 31 0 chrX 146875129 146875194 -19775102 + GA-rich Low_complexity Low_complexity 1 67 0 3 1705 1378 62 0 82 chrX 146877289 146877483 -19772813 - L1_Mus1 LINE L1 0 6567 6390 3 1705 574 256 38 0 chrX 146877663 146877796 -19772500 - ID_B1 SINE B4 -2 222 85 3 1705 259 229 21 0 chrX 146878011 146878059 -19772237 - tRNA-Ala-GCY_ tRNA tRNA -18 57 9 3 1705 272 27 27 0 chrX 146878994 146879031 -19771265 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 3 1705 852 168 0 0 chrX 146879211 146879342 -19770954 + B1_Mur3 SINE Alu 6 136 -13 3 1705 1485 89 16 0 chrX 146879344 146879534 -19770762 - B2_Mm2 SINE B2 -2 193 1 3 1705 841 218 42 47 chrX 146879593 146879805 -19770491 + B3 SINE B2 3 213 -3 3 1705 1408 74 28 22 chrX 146880009 146880188 -19770108 - B2_Mm2 SINE B2 -14 181 2 3 1705 1306 96 0 21 chrX 146880549 146880740 -19769556 - B2_Mm2 SINE B2 -8 187 1 3 1705 642 277 133 21 chrX 146880975 146881163 -19769133 + ID_B1 SINE B4 3 211 -13 3 1705 1105 211 0 37 chrX 146881534 146881750 -19768546 - B3 SINE B2 -6 210 3 3 1705 275 292 0 0 chrX 146881890 146881955 -19768341 + B3A SINE B2 4 68 -130 3 1705 252 0 0 0 chrX 146882134 146882162 -19768134 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1705 984 190 66 26 chrX 146882162 146882389 -19767907 + RMER5 LTR ERV1 21 256 -278 3 1705 1054 154 97 0 chrX 146882404 146882599 -19767697 + RMER5 LTR ERV1 319 532 -2 3 1705 1284 159 22 35 chrX 146884721 146884949 -19765347 - URR1B DNA MER1_type 0 225 1 3 1705 250 267 40 0 chrX 146885516 146885591 -19764705 - ID4 SINE ID -5 78 1 3 1705 252 234 171 37 chrX 146885635 146885799 -19764497 + L1M5 LINE L1 4187 4372 -1774 3 1705 961 257 126 48 chrX 146885814 146886170 -19764126 + MTD LTR MaLR 1 384 -35 3 1705 6707 110 22 15 chrX 146886558 146887648 -19762648 + L1_Mus3 LINE L1 5537 6637 -1 3 1705 10245 88 20 11 chrX 146887645 146889126 -19761170 + L1_Mur2 LINE L1 4240 5733 -144 3 1705 1335 98 43 0 chrX 146889156 146889340 -19760956 + B2_Mm2 SINE B2 1 192 -3 3 1705 6461 108 31 10 chrX 146889340 146890302 -19759994 + Lx4A LINE L1 6016 6997 -61 3 1705 189 195 0 0 chrX 146890335 146890376 -19759920 + T-rich Low_complexity Low_complexity 3 43 0 3 1705 692 162 292 6 chrX 146890458 146890619 -19759677 + B3 SINE B2 1 207 -9 3 1705 267 31 0 0 chrX 146890619 146890651 -19759645 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 3 1705 430 185 80 44 chrX 146891169 146891272 -19759024 + PB1D9 SINE Alu 1 111 -9 3 1705 186 43 0 0 chrX 146891272 146891295 -19759001 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1705 54 90 0 0 chrX 146891373 146891518 -19758778 + AT_rich Low_complexity Low_complexity 1 145 0 3 1705 23 33 0 0 chrX 146891553 146891583 -19758713 + AT_rich Low_complexity Low_complexity 1 30 0 3 1705 337 226 83 42 chrX 146891813 146891933 -19758363 + ID_B1 SINE B4 100 224 0 3 1705 180 77 0 0 chrX 146891933 146891959 -19758337 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1705 210 71 0 0 chrX 146892243 146892271 -19758025 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 3 1705 344 224 52 67 chrX 146892405 146892539 -19757757 - B1F1 SINE Alu -14 135 4 3 1705 273 171 154 26 chrX 146892889 146892967 -19757329 - B3A SINE B2 -128 88 1 3 1705 1251 54 0 0 chrX 146894065 146894213 -19756083 - B1_Mus1 SINE Alu 0 148 1 3 1705 445 287 23 8 chrX 146894247 146894377 -19755919 - ID_B1 SINE B4 -9 215 84 3 1705 667 240 95 18 chrX 146894749 146894970 -19755326 + RMER5 LTR ERV1 29 266 -268 3 1705 1592 195 22 30 chrX 146895032 146895402 -19754894 + RMER5 LTR ERV1 167 533 -1 3 1705 816 167 43 14 chrX 146895604 146895744 -19754552 + B1_Mur4 SINE Alu 1 144 -6 3 1705 342 0 0 0 chrX 146895751 146895789 -19754507 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 3 1705 473 259 15 4 chrX 146895847 146895960 -19754336 + B1_Mur3 SINE Alu 1 119 -1 3 1705 1392 89 5 20 chrX 146896323 146896518 -19753778 + B2_Mm1t SINE B2 1 192 -1 3 1705 916 59 44 0 chrX 146896762 146896898 -19753398 - B1_Mus2 SINE Alu 0 147 6 3 1705 203 250 0 27 chrX 146896922 146896996 -19753300 + CT-rich Low_complexity Low_complexity 2 73 0 3 1705 385 207 267 0 chrX 146898067 146898183 -19752113 + B1_Mur2 SINE Alu 3 149 0 3 1705 2291 69 79 0 chrX 146900271 146900574 -19749722 + ORR1A2 LTR MaLR 1 327 0 3 1705 236 42 65 65 chrX 146902292 146902369 -19747927 + (TTTG)n Simple_repeat Simple_repeat 1 77 0 3 1705 1169 41 0 40 chrX 146902369 146902520 -19747776 - B1_Mm SINE Alu -1 146 2 3 1705 1839 162 66 11 chrX 146902754 146903117 -19747179 - ORR1C2 LTR MaLR -1 383 1 3 1705 3880 52 2 8 chrX 146903331 146903815 -19746481 + L1Md_F2 LINE L1 6102 6582 0 3 1705 311 297 54 0 chrX 146903844 146903955 -19746341 + PB1D10 SINE Alu 1 117 0 3 1705 362 250 33 0 chrX 146904293 146904385 -19745911 + PB1D10 SINE Alu 1 95 -22 3 1705 1481 205 71 27 chrX 146904712 146905078 -19745218 - MTD LTR MaLR -2 417 36 3 1705 4957 182 100 14 chrX 146905107 146905817 -19744479 + RMER12 LTR ERVK 1 767 -555 3 1705 255 103 0 0 chrX 146905817 146905856 -19744440 + (TCCA)n Simple_repeat Simple_repeat 1 39 0 3 1705 4957 182 100 14 chrX 146905856 146906307 -19743989 + RMER12 LTR ERVK 768 1261 -61 3 1705 898 247 67 27 chrX 146907110 146907409 -19742887 - RLTR40 LTR ERVK -220 597 287 3 1705 357 129 0 0 chrX 146907414 146907484 -19742812 + (GA)n Simple_repeat Simple_repeat 2 71 0 4 1705 342 0 0 0 chrX 146907488 146907526 -19742770 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1705 799 223 22 61 chrX 146907537 146907766 -19742530 - RLTR40 LTR ERVK -549 268 49 3 1705 984 205 51 0 chrX 146908425 146908620 -19741676 - B3 SINE B2 -11 205 1 4 1705 913 226 315 58 chrX 146909083 146909534 -19740762 - RMER2 LTR ERV1 0 567 1 4 1705 601 295 107 21 chrX 146909549 146909875 -19740421 - RMER5 LTR ERV1 -176 358 5 4 1705 1322 91 21 0 chrX 146910015 146910202 -19740094 + B2_Mm2 SINE B2 2 192 -3 4 1705 277 303 0 11 chrX 146910338 146910428 -19739868 + ID_B1 SINE B4 123 211 -13 4 1705 1126 114 57 0 chrX 146910429 146910604 -19739692 + B2_Mm1t SINE B2 4 188 -5 4 1705 1094 203 98 34 chrX 146910646 146910942 -19739354 - RLTR46 LTR ERVK -5 315 1 4 1705 292 137 20 0 chrX 146911130 146911181 -19739115 - B4A SINE B4 -60 232 181 4 1705 232 310 224 0 chrX 146911137 146911253 -19739043 - B1F2 SINE Alu -3 146 5 4 1705 339 316 65 50 chrX 146911264 146911541 -19738755 + RMER10A LTR ERVL 21 301 -141 4 1705 411 219 27 54 chrX 146911590 146911701 -19738595 - B4A SINE B4 -179 113 6 4 1705 267 182 67 11 chrX 146913411 146913500 -19736796 + URR1B DNA MER1_type 77 170 -55 4 1705 192 40 0 0 chrX 146913618 146913643 -19736653 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1705 3480 40 0 5 chrX 146913717 146914139 -19736157 + L1Md_F3 LINE L1 6165 6584 0 4 1705 3615 31 2 0 chrX 146914150 146914569 -19735727 + L1Md_F3 LINE L1 6165 6584 0 4 1705 2518 276 85 27 chrX 146914609 146915496 -19734800 - Lx9 LINE L1 -276 7368 6431 4 1705 455 259 191 0 chrX 146915549 146915680 -19734616 - U1 snRNA snRNA -4 161 6 4 1705 2318 102 16 0 chrX 146915739 146916061 -19734235 + ORR1A2 LTR MaLR 1 327 0 4 1705 4024 173 112 14 chrX 146916116 146917058 -19733238 + L1_Mur3 LINE L1 361 1393 -4487 4 1705 709 164 0 36 chrX 146917058 146917223 -19733073 + Lx LINE L1 6496 6654 0 4 1705 1587 196 18 23 chrX 146917223 146917416 -19732880 + L1_Mur3 LINE L1 1394 1592 -4288 4 1705 4661 120 35 20 chrX 146917415 146918388 -19731908 + Lx4A LINE L1 5370 6382 -676 4 1705 2956 31 9 0 chrX 146918385 146918735 -19731561 + L1Md_F3 LINE L1 6232 6584 0 4 1705 4462 114 9 6 chrX 146918734 146919372 -19730924 + Lx4A LINE L1 6372 7011 -47 4 1705 776 142 109 6 chrX 146919374 146919530 -19730766 + MERVL_2A-int LTR ERVL 5588 5759 -2 4 1705 418 226 57 21 chrX 146919530 146919573 -19730723 + Ricksha_c DNA MuDR 344 391 -1657 4 1705 3060 63 192 25 chrX 146919663 146920173 -19730123 + RLTR6_Mm LTR ERV1 44 639 -15 4 1705 21576 87 50 50 chrX 146920174 146923922 -19726374 + MMVL30-int LTR ERV1 1 3698 0 4 1705 2894 66 200 26 chrX 146924021 146924511 -19725785 + RLTR6_Mm LTR ERV1 44 619 -35 4 1705 1217 185 86 34 chrX 146924511 146924660 -19725636 + MT2A LTR ERVL 30 179 -354 4 1705 3941 98 18 118 chrX 146924660 146925328 -19724968 + MT2B LTR ERVL 1 601 0 4 1705 1217 185 86 34 chrX 146925328 146925433 -19724863 + MT2A LTR ERVL 180 298 -235 4 1705 1576 144 62 88 chrX 146925433 146925686 -19724610 + RLTR14 LTR ERV1 2 249 -133 4 1705 1428 44 6 0 chrX 146925686 146925869 -19724427 + L1Md_F2 LINE L1 6398 6581 -1 4 1705 1576 144 62 88 chrX 146925869 146925894 -19724402 + RLTR14 LTR ERV1 250 275 -107 4 1705 519 17 0 0 chrX 146925894 146925954 -19724342 + (TC)n Simple_repeat Simple_repeat 1 60 0 4 1705 1576 144 62 88 chrX 146925954 146926062 -19724234 + RLTR14 LTR ERV1 276 379 -3 4 1705 570 193 33 67 chrX 146926062 146926212 -19724084 + RLTR14-int LTR ERV1 1 145 -5172 4 1705 587 47 0 0 chrX 146926212 146926297 -19723999 + RLTR22_Mus LTR ERVK 665 749 -1059 4 1705 509 169 135 16 chrX 146926290 146926416 -19723880 + B1F SINE Alu 9 149 0 4 1705 374 235 0 0 chrX 146926639 146926720 -19723576 + ID_B1 SINE B4 134 214 -10 4 1705 229 326 30 10 chrX 146926842 146926941 -19723355 - PB1D10 SINE Alu -13 104 4 4 1705 479 175 58 10 chrX 146927190 146927294 -19723002 + RSINE1 SINE B4 3 111 -54 4 1705 485 244 24 0 chrX 146927422 146927549 -19722747 - B1F2 SINE Alu -5 144 15 4 1705 868 149 200 0 chrX 146927989 146928164 -19722132 + B3 SINE B2 1 210 -6 4 1705 22 35 0 0 chrX 146928526 146928555 -19721741 + AT_rich Low_complexity Low_complexity 1 29 0 4 1705 530 246 7 60 chrX 146928559 146928710 -19721586 + ID_B1 SINE B4 67 209 -15 4 1705 261 0 0 0 chrX 146929391 146929420 -19720876 + (A)n Simple_repeat Simple_repeat 1 29 0 4 1705 2625 217 127 96 chrX 146929450 146929657 -19720639 + RLTR14-int LTR ERV1 165 383 -4934 4 1705 545 0 15 0 chrX 146929657 146929722 -19720574 + (TG)n Simple_repeat Simple_repeat 2 67 0 4 1705 2625 217 127 96 chrX 146929722 146930525 -19719771 + RLTR14-int LTR ERV1 384 1206 -4111 4 1705 5025 77 39 3 chrX 146930525 146931302 -19718994 + RLTR22_Mur LTR ERVK 1 805 -1043 4 1706 592 116 12 0 chrX 146931745 146931831 -19718465 + RLTR14-int LTR ERV1 1203 1289 -4028 4 1706 1593 145 137 38 chrX 146931919 146932234 -19718062 + RLTR14-int LTR ERV1 1285 1630 -3687 4 1706 300 180 144 11 chrX 146932300 146932390 -19717906 + RLTR14-int LTR ERV1 1742 1843 -3474 4 1706 4702 160 100 44 chrX 146932526 146932826 -19717470 - RMER12 LTR ERVK -150 1172 836 4 1706 183 129 0 0 chrX 146932826 146932857 -19717439 + (CATA)n Simple_repeat Simple_repeat 1 31 0 4 1706 4702 160 99 44 chrX 146932857 146932893 -19717403 - RMER12 LTR ERVK -487 835 779 4 1706 456 19 0 0 chrX 146932893 146932946 -19717350 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 4 1706 4702 160 99 44 chrX 146932946 146933370 -19716926 - RMER12 LTR ERVK -544 778 338 4 1706 552 15 0 0 chrX 146933370 146933435 -19716861 + (TC)n Simple_repeat Simple_repeat 2 66 0 4 1706 4702 160 99 44 chrX 146933435 146933450 -19716846 - RMER12 LTR ERVK -985 337 337 4 1706 1185 56 0 0 chrX 146933450 146933594 -19716702 - B1_Mus1 SINE Alu 0 148 5 4 1706 4702 160 99 44 chrX 146933594 146933938 -19716358 - RMER12 LTR ERVK -985 337 2 4 1706 18037 137 79 65 chrX 146933938 146937369 -19712927 + RLTR14-int LTR ERV1 1838 5317 0 4 1706 1933 118 41 0 chrX 146937393 146937707 -19712589 + RLTR14 LTR ERV1 7 333 -49 4 1706 318 98 390 32 chrX 146937895 146937990 -19712306 - B2_Mm2 SINE B2 -19 176 48 4 1706 1098 132 60 0 chrX 146938038 146938204 -19712092 - B2_Mm1t SINE B2 -14 179 4 4 1706 8472 36 5 3 chrX 146938629 146939817 -19710479 - L1Md_F2 LINE L1 -2 6580 5391 4 1706 21 95 0 0 chrX 146939943 146940006 -19710290 + AT_rich Low_complexity Low_complexity 1 63 0 4 1706 13668 90 28 16 chrX 146940508 146940787 -19709509 - L1VL2 LINE L1 -603 3012 2704 4 1706 516 32 0 0 chrX 146940787 146940849 -19709447 + (TTTTC)n Simple_repeat Simple_repeat 3 64 0 4 1706 13668 88 26 15 chrX 146940849 146942682 -19707614 - L1VL2 LINE L1 -912 2703 875 4 1706 1057 116 0 0 chrX 146942699 146942845 -19707451 - B1_Mus1 SINE Alu -1 147 2 4 1706 384 161 0 0 chrX 146942845 146942907 -19707389 + RLTR14 LTR ERV1 321 382 0 4 1706 233 284 59 59 chrX 146942965 146943066 -19707230 + MER5B DNA MER1_type 42 142 -36 4 1706 703 167 67 15 chrX 146943791 146943925 -19706371 + B1_Mur4 SINE Alu 9 149 -1 4 1706 261 75 0 0 chrX 146944406 146944446 -19705850 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 4 1706 865 192 81 20 chrX 146944453 146944620 -19705676 + MTD LTR MaLR 23 204 -215 4 1706 284 0 28 0 chrX 146944620 146944656 -19705640 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 4 1706 649 250 9 0 chrX 146944661 146944777 -19705519 + B1_Mur4 SINE Alu 1 117 -33 4 1706 360 118 0 0 chrX 146944860 146944928 -19705368 + (CA)n Simple_repeat Simple_repeat 2 69 0 4 1706 227 258 0 8 chrX 146946511 146946640 -19703656 + (CA)n Simple_repeat Simple_repeat 2 129 0 4 1706 44 35 0 0 chrX 146946895 146946953 -19703343 + AT_rich Low_complexity Low_complexity 1 58 0 4 1706 360 0 0 0 chrX 146947041 146947081 -19703215 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1706 3252 273 64 31 chrX 146947081 146948161 -19702135 - Lx9 LINE L1 -188 7456 6342 4 1706 390 42 0 0 chrX 146948162 146948210 -19702086 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 1706 422 304 0 0 chrX 146948432 146948524 -19701772 + PB1D10 SINE Alu 1 92 -25 4 1706 225 308 13 200 chrX 146948434 146948584 -19701712 + MT2B2 LTR ERVL 167 288 -296 4 1706 403 130 13 13 chrX 146948593 146948671 -19701625 + GA-rich Low_complexity Low_complexity 1 78 0 4 1706 5287 18 0 15 chrX 146949005 146949588 -19700708 + L1Md_A LINE L1 6009 6582 0 4 1706 465 110 0 0 chrX 146950002 146950084 -19700212 + (TG)n Simple_repeat Simple_repeat 2 83 0 4 1706 594 239 26 0 chrX 146950084 146950197 -19700099 - RSINE1 SINE B4 -48 117 2 4 1706 666 276 7 14 chrX 146950382 146950529 -19699767 + RSINE1 SINE B4 3 148 -17 4 1706 4702 268 66 36 chrX 146950666 146952716 -19697580 - Lx8 LINE L1 -152 7321 5205 4 1706 213 94 0 0 chrX 146952716 146952748 -19697548 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1706 2401 248 48 12 chrX 146952748 146952762 -19697534 - Lx8 LINE L1 -676 5204 5191 4 1706 655 233 39 0 chrX 146952766 146952895 -19697401 - B1_Mur2 SINE Alu -14 135 2 4 1706 439 226 16 34 chrX 146952913 146953045 -19697251 - RMER1C Other Other 0 1342 1227 4 1706 222 37 0 0 chrX 146953171 146953198 -19697098 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 4 1706 3620 55 0 9 chrX 146953200 146953638 -19696658 + L1Md_F2 LINE L1 6145 6578 -4 4 1706 506 184 121 10 chrX 146953642 146953741 -19696555 - RMER1C Other Other -140 1202 1093 4 1706 359 221 54 71 chrX 146953741 146953853 -19696443 - B1F1 SINE Alu 0 149 40 4 1706 501 316 94 10 chrX 146953754 146953946 -19696350 - ID_B1 SINE B4 -7 217 10 4 1706 22 0 0 0 chrX 146954151 146954173 -19696123 + AT_rich Low_complexity Low_complexity 1 22 0 4 1706 406 309 55 0 chrX 146954196 146954306 -19695990 - B1F2 SINE Alu -5 144 29 4 1706 315 325 16 32 chrX 146954329 146954453 -19695843 + L1M5 LINE L1 5494 5615 -625 4 1706 331 282 118 45 chrX 146954456 146954634 -19695662 - L1ME3A LINE L1 -331 5842 5652 4 1706 252 100 0 0 chrX 146954980 146955020 -19695276 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 4 1706 304 266 51 101 chrX 146955024 146955061 -19695235 + MT2B LTR ERVL 127 156 -445 4 1706 655 246 0 31 chrX 146955061 146955191 -19695105 + B1_Mur1 SINE Alu 4 129 -20 4 1706 275 0 0 28 chrX 146955196 146955232 -19695064 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 4 1706 944 347 66 5 chrX 146955232 146955669 -19694627 - MLT1A1-int LTR MaLR -1264 471 8 4 1706 388 270 32 145 chrX 146955671 146955787 -19694509 - MLT1A1 LTR MaLR -32 376 274 4 1706 4605 53 67 4 chrX 146955787 146956339 -19693957 + LTRIS_Mus LTR ERV1 1 587 0 4 1706 388 270 32 145 chrX 146956339 146956396 -19693900 - MLT1A1 LTR MaLR -135 273 223 4 1706 1702 163 219 26 chrX 146956396 146956748 -19693548 + RLTR9B2 LTR ERVK 1 420 0 4 1706 388 270 32 145 chrX 146956748 146956794 -19693502 - MLT1A1 LTR MaLR -186 222 181 4 1706 34 55 0 0 chrX 146956807 146956862 -19693434 + AT_rich Low_complexity Low_complexity 1 55 0 4 1706 800 158 19 27 chrX 146956919 146957073 -19693223 + MT2A LTR ERVL 2 153 -448 4 1706 297 0 0 0 chrX 146957164 146957197 -19693099 + (TAGA)n Simple_repeat Simple_repeat 2 34 0 4 1706 310 157 56 14 chrX 146957197 146957268 -19693028 + L1MB4 LINE L1 5800 5873 -307 4 1706 240 179 0 0 chrX 146957396 146957435 -19692861 + B1F SINE Alu 24 62 -87 5 1706 354 98 0 0 chrX 146957483 146957534 -19692762 + (GGAGA)n Simple_repeat Simple_repeat 5 55 0 5 1706 639 321 82 11 chrX 146957555 146957823 -19692473 + B4A SINE B4 2 288 -4 5 1706 2202 158 13 26 chrX 146957855 146958132 -19692164 + RLTR30 LTR ERV1 1 272 -107 5 1706 4505 73 22 48 chrX 146958132 146958735 -19691561 + LTRIS_Mus LTR ERV1 1 587 0 5 1706 2202 158 13 26 chrX 146958735 146958840 -19691456 + RLTR30 LTR ERV1 273 378 -1 5 1706 480 144 124 9 chrX 146958965 146959070 -19691226 - Lx9 LINE L1 -26 7618 7502 5 1706 420 155 0 127 chrX 146959066 146959184 -19691112 + Lx9 LINE L1 7000 7102 -542 5 1706 545 105 0 11 chrX 146959317 146959404 -19690892 + (TTTC)n Simple_repeat Simple_repeat 2 87 0 5 1706 489 169 77 57 chrX 146959404 146959598 -19690698 - RMER17C LTR ERVK -137 273 76 5 1706 5611 27 5 3 chrX 146960073 146960699 -19689597 + L1Md_F3 LINE L1 5956 6582 -2 5 1706 1117 245 104 23 chrX 146961125 146961509 -19688787 + Lx9 LINE L1 7223 7637 -7 5 1706 244 344 39 31 chrX 146961909 146962038 -19688258 + Lx7 LINE L1 7039 7168 -528 5 1706 5997 184 33 30 chrX 146963104 146964526 -19685770 + L1_Mur3 LINE L1 17 1270 -6458 5 1706 36227 37 0 0 chrX 146964529 146969836 -19680460 + L1Md_T LINE L1 186 5589 -297 5 1706 9586 5 0 0 chrX 146969836 146970832 -19679464 + L1Md_T LINE L1 5590 6585 0 5 1706 7299 154 38 120 chrX 146970832 146970991 -19679305 + L1_Mur3 LINE L1 1257 1427 -4453 5 1706 495 0 0 0 chrX 146970991 146971046 -19679250 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 5 1706 7299 154 38 120 chrX 146971046 146972638 -19677658 + L1_Mur3 LINE L1 1428 2863 -3017 5 1706 3999 129 159 26 chrX 146972638 146973410 -19676886 + L1_Mur3 LINE L1 3841 4715 -1165 5 1706 294 139 0 0 chrX 146973410 146973453 -19676843 + ORR1A4 LTR MaLR 287 329 0 5 1706 234 191 62 16 chrX 146973453 146973517 -19676779 + L1M2 LINE L1 4749 4815 -1328 5 1706 380 353 25 25 chrX 146973551 146973711 -19676585 - B4A SINE B4 -129 163 4 5 1706 444 247 21 0 chrX 146973746 146973839 -19676457 - B3 SINE B2 -2 214 120 5 1706 446 179 40 97 chrX 146973820 146973944 -19676352 + MT2B LTR ERVL 148 264 -337 5 1706 1074 50 14 0 chrX 146973837 146973977 -19676319 + B1_Mus2 SINE Alu 6 147 0 5 1706 369 62 0 0 chrX 146973989 146974037 -19676259 + (GGA)n Simple_repeat Simple_repeat 3 50 0 5 1706 443 248 129 26 chrX 146974050 146974166 -19676130 - B3A SINE B2 -69 129 2 5 1706 466 233 0 0 chrX 146974204 146974290 -19676006 - B1_Mur3 SINE Alu -62 87 2 5 1706 187 133 0 43 chrX 146975830 146975877 -19674419 + GA-rich Low_complexity Low_complexity 4 48 0 5 1706 409 305 0 25 chrX 146975900 146976021 -19674275 - B3 SINE B2 -98 118 1 5 1706 3452 124 134 10 chrX 146976055 146976680 -19673616 - RMER6A LTR ERVK 0 756 54 5 1706 214 180 137 20 chrX 146976692 146976743 -19673553 - B1F SINE Alu -90 59 3 5 1706 723 234 7 7 chrX 146977036 146977174 -19673122 - B1_Mus2 SINE Alu -8 139 2 5 1706 751 269 14 0 chrX 146977470 146977615 -19672681 - RSINE1 SINE B4 -15 150 4 5 1706 267 31 0 0 chrX 146977817 146977849 -19672447 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1706 756 295 62 9 chrX 146977859 146978085 -19672211 + MTD LTR MaLR 1 238 -181 5 1706 1646 279 12 10 chrX 146978085 146978487 -19671809 + Lx5 LINE L1 6644 7046 -4 5 1706 626 82 0 20 chrX 146978519 146978618 -19671678 + (GAGAA)n Simple_repeat Simple_repeat 2 98 0 5 1706 1192 210 0 22 chrX 146978618 146978847 -19671449 + MTD LTR MaLR 196 419 0 5 1706 296 260 46 37 chrX 146979105 146979213 -19671083 + L1M5 LINE L1 5351 5459 -665 5 1706 490 348 31 25 chrX 146979324 146979486 -19670810 - RSINE1 SINE B4 0 165 3 5 1706 3314 60 0 8 chrX 146979552 146979953 -19670343 - L1_Mus1 LINE L1 0 6567 6170 5 1706 6093 82 0 0 chrX 146979953 146980745 -19669551 - L1_Mm LINE L1 -116 5767 4976 5 1706 282 348 26 17 chrX 146983257 146983374 -19666922 + MIR SINE MIR 10 127 -135 5 1706 207 277 24 21 chrX 146984488 146984591 -19665705 - MIR SINE MIR -68 200 92 5 1706 697 201 70 101 chrX 146985206 146985405 -19664891 - B3A SINE B2 -3 195 3 5 1706 195 305 72 12 chrX 146986397 146986481 -19663815 - MIR SINE MIR -151 125 32 5 1706 181 265 0 108 chrX 146986502 146986595 -19663701 + L3 LINE CR1 952 1034 -3455 5 1706 242 196 0 0 chrX 146989072 146989118 -19661178 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1706 283 370 36 29 chrX 146989424 146989563 -19660733 + MIR SINE MIR 66 205 -63 5 1706 369 176 0 0 chrX 146990049 146990123 -19660173 + (TA)n Simple_repeat Simple_repeat 2 75 0 5 1706 1285 309 62 42 chrX 146990123 146990465 -19659831 - L1MA4 LINE L1 -372 5928 5603 5 1706 818 205 66 56 chrX 146990465 146990661 -19659635 - B3A SINE B2 0 198 1 5 1706 1285 309 62 42 chrX 146990661 146990933 -19659363 - L1MA4 LINE L1 -698 5602 5302 5 1706 487 303 94 80 chrX 146991222 146991498 -19658798 + B4 SINE B4 2 281 -11 5 1706 219 218 0 0 chrX 146992202 146992257 -19658039 + GA-rich Low_complexity Low_complexity 4 58 0 5 1706 519 60 0 0 chrX 146993563 146993630 -19656666 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 1706 255 315 81 0 chrX 146994225 146994336 -19655960 + PB1D7 SINE Alu 1 120 0 5 1706 309 218 54 98 chrX 146994431 146994543 -19655753 - L2c LINE L2 0 3387 3281 5 1706 213 304 32 21 chrX 146995523 146995617 -19654679 - MIR SINE MIR -21 241 147 5 1706 242 214 219 19 chrX 146995631 146995736 -19654560 - MIR SINE MIR -63 199 74 5 1706 253 301 36 0 chrX 146996394 146996477 -19653819 + MIR SINE MIR 57 142 -120 5 1706 210 85 85 0 chrX 146996540 146996587 -19653709 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1706 298 339 39 23 chrX 146996898 146997028 -19653268 - RSINE1 SINE B4 -29 136 5 5 1706 185 314 105 29 chrX 146997030 146997135 -19653161 + MIR SINE MIR 90 202 -60 5 1706 204 67 0 0 chrX 146997283 146997313 -19652983 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 5 1706 1927 201 88 5 chrX 146998476 146998860 -19651436 - MTC LTR MaLR -3 418 3 5 1706 301 143 75 38 chrX 146999007 146999087 -19651209 - Lx9 LINE L1 -2 7642 7560 5 1706 286 292 129 32 chrX 147000074 147000198 -19650098 + MER112 DNA MER1_type 3 138 -123 1 1706 535 257 213 21 chrX 147000461 147000747 -19649549 - MER2 DNA MER2_type -1 344 4 2 1706 403 333 45 83 chrX 147001280 147001628 -19648668 - L2c LINE L2 -1 3386 3038 3 1706 375 233 0 0 chrX 147001658 147001731 -19648565 + ID_B1 SINE B4 82 154 -70 4 1706 343 246 26 47 chrX 147001731 147001778 -19648518 + PB1D10 SINE Alu 1 125 -24 5 1706 767 185 25 0 chrX 147001924 147002081 -19648215 - Lx9 LINE L1 -7 7637 7477 6 1706 252 0 0 0 chrX 147002085 147002113 -19648183 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 1706 282 206 0 0 chrX 147002148 147002211 -19648085 + (TA)n Simple_repeat Simple_repeat 2 64 0 8 1706 368 276 172 7 chrX 147002593 147002751 -19647545 - MIR SINE MIR -3 265 81 9 1706 887 169 86 11 chrX 147003216 147003390 -19646906 + B2_Mm2 SINE B2 2 188 -7 1 1706 225 330 43 0 chrX 147003445 147003539 -19646757 + Charlie7 DNA MER1_type 2514 2611 -1 1 1706 398 333 106 60 chrX 147003738 147004407 -19645889 - L2a LINE L2 0 3426 2275 1 1706 216 293 64 39 chrX 147007280 147007358 -19642938 - MIR3 SINE MIR -48 160 81 1 1706 531 82 0 0 chrX 147007385 147007458 -19642838 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 1 1706 789 230 90 5 chrX 147007461 147007649 -19642647 - B3 SINE B2 -6 210 7 1 1706 686 270 41 31 chrX 147007699 147007894 -19642402 + B3A SINE B2 1 197 -1 1 1706 346 337 22 0 chrX 147008025 147008117 -19642179 + PB1D7 SINE Alu 3 96 -24 1 1706 20419 196 68 69 chrX 147009263 147013308 -19636988 + Lx7 LINE L1 39 3987 -1893 1 1706 1530 54 16 5 chrX 147013308 147013493 -19636803 + B2_Mm1t SINE B2 2 188 -5 1 1706 20419 167 60 57 chrX 147013493 147014247 -19636049 + Lx7 LINE L1 3988 4751 -1129 1 1706 243 0 0 0 chrX 147014247 147014274 -19636022 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1706 20419 179 63 52 chrX 147014274 147015618 -19634678 + Lx7 LINE L1 4752 6188 -1508 1 1706 429 20 0 0 chrX 147015618 147015668 -19634628 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 1706 387 0 0 0 chrX 147015668 147015710 -19634586 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1706 8019 221 70 32 chrX 147015710 147017134 -19633162 + Lx7 LINE L1 6189 7695 -1 1 1706 290 309 12 0 chrX 147017235 147017316 -19632980 + MER21B LTR ERV1 277 358 -505 2 1706 913 18 0 0 chrX 147017556 147017668 -19632628 - L1Md_A LINE L1 -1 6581 6470 2 1706 612 25 38 0 chrX 147017668 147017747 -19632549 + L1Md_A LINE L1 5870 5951 -631 2 1706 388 238 78 10 chrX 147017764 147017866 -19632430 + MER21B LTR ERV1 486 594 -269 2 1706 733 263 46 14 chrX 147018102 147018318 -19631978 + L1MA8 LINE L1 5638 5860 -431 2 1706 302 246 16 8 chrX 147018318 147018339 -19631957 + ORR1B1-int LTR MaLR 627 648 -861 2 1706 851 55 20 10 chrX 147018339 147018465 -19631831 + B1_Mus1 SINE Alu 1 120 0 2 1706 252 0 0 0 chrX 147018465 147018493 -19631803 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1706 690 299 125 24 chrX 147018493 147018876 -19631420 + L1MA8 LINE L1 5879 6300 0 2 1706 254 299 22 22 chrX 147019286 147019375 -19630921 + L2c LINE L2 3087 3175 -212 3 1706 1306 48 0 0 chrX 147020727 147020874 -19629422 + B1_Mm SINE Alu 1 147 0 3 1706 511 238 89 20 chrX 147020935 147021081 -19629215 + B4 SINE B4 36 191 -101 3 1706 788 64 3 1 chrX 147020984 147021099 -19629197 + B1_Mus1 SINE Alu 5 120 0 3 1706 389 291 115 7 chrX 147021230 147021384 -19628912 - MIR SINE MIR -85 183 17 3 1706 186 43 0 0 chrX 147021671 147021694 -19628602 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1706 530 179 28 28 chrX 147022830 147022939 -19627357 + PB1D10 SINE Alu 1 109 -8 3 1706 258 275 128 40 chrX 147023497 147023622 -19626674 - MIRc SINE MIR -131 137 2 3 1706 25 31 0 0 chrX 147024790 147024822 -19625474 + AT_rich Low_complexity Low_complexity 1 32 0 3 1706 275 260 63 63 chrX 147024961 147025072 -19625224 - B1F SINE Alu -7 142 32 3 1706 207 369 107 0 chrX 147025149 147025252 -19625044 + MIRc SINE MIR 84 197 -71 4 1706 194 347 166 25 chrX 147026070 147026397 -19623899 - L2c LINE L2 -18 3357 2979 4 1706 692 263 199 16 chrX 147026979 147027346 -19622950 - L1MA5 LINE L1 0 6300 5867 4 1706 381 325 8 17 chrX 147027623 147027742 -19622554 - MIR SINE MIR -137 125 8 4 1706 341 321 18 27 chrX 147030503 147030615 -19619681 + B1F2 SINE Alu 31 141 -8 4 1706 2799 58 0 0 chrX 147030619 147030962 -19619334 - L1Md_F2 LINE L1 -527 6055 5713 4 1706 4178 60 0 4 chrX 147030962 147031449 -19618847 + L1Md_F2 LINE L1 6086 6570 -12 4 1706 332 358 85 0 chrX 147031587 147031752 -19618544 + MIR SINE MIR 70 248 -14 4 1706 219 333 29 14 chrX 147031765 147031835 -19618461 + L2b LINE L2 3286 3356 -19 4 1706 756 144 0 0 chrX 147032009 147032148 -19618148 - L1_Mus1 LINE L1 0 6567 6443 4 1706 216 0 0 0 chrX 147032345 147032369 -19617927 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1706 543 291 114 86 chrX 147032369 147033438 -19616858 - L1MEc LINE L1 -2023 4296 3198 5 1706 400 390 16 36 chrX 147033524 147033718 -19616578 - MamRep38 DNA hAT -75 220 31 5 1706 796 175 22 7 chrX 147034121 147034259 -19616037 - B1_Mur2 SINE Alu -1 148 9 5 1706 482 211 0 0 chrX 147034266 147034375 -19615921 - L1MB7 LINE L1 0 6174 6065 5 1706 329 212 141 0 chrX 147034405 147034490 -19615806 + Lx8 LINE L1 7377 7473 0 5 1706 510 160 152 0 chrX 147034500 147034625 -19615671 - L1MA5 LINE L1 -7 6293 6150 5 1706 1209 270 65 13 chrX 147034627 147035014 -19615282 - L1MB7 LINE L1 -117 6067 5661 5 1706 1023 37 44 0 chrX 147035014 147035150 -19615146 - B2_Mm2 SINE B2 -1 194 53 5 1706 216 97 0 0 chrX 147035153 147035184 -19615112 + (CATA)n Simple_repeat Simple_repeat 2 32 0 5 1706 198 0 0 0 chrX 147035399 147035421 -19614875 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1706 1014 69 0 0 chrX 147035421 147035552 -19614744 - B1_Mm SINE Alu 0 147 17 5 1706 3104 36 14 0 chrX 147035559 147035917 -19614379 - L1Md_F3 LINE L1 0 6584 6222 6 1706 245 29 29 0 chrX 147035996 147036030 -19614266 + (TTC)n Simple_repeat Simple_repeat 2 36 0 6 1706 405 284 37 47 chrX 147036719 147036826 -19613470 - RSINE1 SINE B4 -58 107 2 6 1706 280 270 0 16 chrX 147036832 147036896 -19613400 - PB1D10 SINE Alu -9 108 46 6 1706 311 207 60 9 chrX 147037066 147037173 -19613123 - L1MEc LINE L1 -4023 2392 2281 5 1706 255 361 0 44 chrX 147037175 147037288 -19613008 + PB1D7 SINE Alu 5 112 -8 6 1706 416 227 11 0 chrX 147037552 147037640 -19612656 + B1_Mur3 SINE Alu 3 91 -58 6 1706 263 306 81 0 chrX 147037640 147037800 -19612496 + L1MA6 LINE L1 5951 6123 -177 6 1706 258 359 13 0 chrX 147037810 147037888 -19612408 - ID2 SINE ID -3 80 2 6 1706 23 33 0 0 chrX 147037921 147037951 -19612345 + AT_rich Low_complexity Low_complexity 1 30 0 6 1706 262 195 48 72 chrX 147037959 147038042 -19612254 - B3 SINE B2 0 216 136 6 1706 614 187 0 27 chrX 147038030 147038140 -19612156 + B1_Mus2 SINE Alu 41 147 0 7 1706 634 253 41 67 chrX 147038163 147038358 -19611938 + B3 SINE B2 1 190 -26 7 1706 596 297 41 0 chrX 147038375 147038520 -19611776 - B3 SINE B2 -54 162 12 7 1706 34 42 0 0 chrX 147038535 147038583 -19611713 + AT_rich Low_complexity Low_complexity 1 48 0 7 1706 288 194 42 31 chrX 147038659 147038801 -19611495 + (CAAA)n Simple_repeat Simple_repeat 1 143 0 7 1706 482 248 46 8 chrX 147038811 147038941 -19611355 - Lx7 LINE L1 -400 7296 7162 7 1706 249 245 0 0 chrX 147038937 147038990 -19611306 - Lx6 LINE L1 -1000 6460 6408 7 1706 274 204 19 0 chrX 147039000 147039054 -19611242 - Lx7 LINE L1 -1315 6381 6327 7 1706 816 128 0 175 chrX 147039054 147039225 -19611071 - B1_Mur4 SINE Alu -8 142 2 7 1706 594 280 77 33 chrX 147039235 147039256 -19611040 - B3A SINE B2 -8 190 172 7 1706 308 24 0 24 chrX 147039256 147039298 -19610998 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 7 1706 1040 136 13 3 chrX 147039298 147039457 -19610839 - B2_Mm2 SINE B2 -27 171 2 7 1706 242 0 0 57 chrX 147039467 147039502 -19610794 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 8 1706 3574 149 85 22 chrX 147039512 147039681 -19610615 - L1_Mur3 LINE L1 -3852 2028 1872 8 1706 288 0 0 0 chrX 147039681 147039713 -19610583 + (TTGG)n Simple_repeat Simple_repeat 2 33 0 8 1706 3574 154 79 18 chrX 147039713 147040500 -19609796 - L1_Mur3 LINE L1 -4009 1871 1009 8 1706 579 189 83 0 chrX 147040532 147040629 -19609667 - Lx9 LINE L1 -37 7436 7341 8 1706 351 0 0 0 chrX 147040629 147040668 -19609628 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 1706 2873 190 9 26 chrX 147040668 147041257 -19609039 - Lx9 LINE L1 -181 7463 6750 8 1706 759 36 0 26 chrX 147041284 147041397 -19608899 - L1Md_F2 LINE L1 -1 6581 6472 8 1706 279 235 34 45 chrX 147041401 147041535 -19608761 - L1MCa LINE L1 -5569 1559 1342 8 1706 770 207 14 14 chrX 147041577 147041719 -19608577 - B1_Mur3 SINE Alu -7 142 1 8 1706 675 243 28 45 chrX 147041768 147041945 -19608351 - B3A SINE B2 -24 174 1 8 1706 1378 130 32 24 chrX 147041969 147042222 -19608074 - Lx2B LINE L1 0 7000 6746 8 1706 382 322 92 101 chrX 147042579 147042994 -19607302 - L1MCa LINE L1 -6006 1122 712 8 1706 2188 161 29 19 chrX 147044566 147044940 -19605356 - ORR1C1 LTR MaLR 0 378 1 9 1706 218 319 102 41 chrX 147045105 147045203 -19605093 + MIR SINE MIR 32 135 -73 9 1706 388 312 135 0 chrX 147045254 147045395 -19604901 + MIRc SINE MIR 33 192 -76 9 1706 632 226 6 31 chrX 147045745 147045905 -19604391 + RMER30 DNA MER1_type 11 166 -36 9 1706 7666 24 1 0 chrX 147046534 147047371 -19602925 - L1Md_A LINE L1 -1 6581 5744 9 1706 244 333 120 23 chrX 147047576 147047751 -19602545 - MIR SINE MIR -10 252 61 9 1706 353 322 98 58 chrX 147048641 147048865 -19601431 + Tigger15a DNA TcMar 306 538 -177 9 1706 42287 3 0 0 chrX 147048902 147055293 -19595003 - L1Md_A LINE L1 0 6582 232 9 1706 439 286 112 59 chrX 147055493 147055735 -19594561 - B4 SINE B4 -4 288 53 9 1706 560 294 14 34 chrX 147055898 147056046 -19594250 + RSINE1 SINE B4 2 146 -19 9 1706 1157 36 0 0 chrX 147057979 147058117 -19592179 + B1_Mus1 SINE Alu 2 139 -9 1 1706 201 74 0 0 chrX 147058117 147058144 -19592152 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1706 24 0 0 0 chrX 147058206 147058230 -19592066 + AT_rich Low_complexity Low_complexity 1 24 0 1 1706 216 325 0 13 chrX 147059076 147059154 -19591142 + C-rich Low_complexity Low_complexity 5 81 0 1 1706 706 201 241 0 chrX 147060697 147060871 -19589425 - B3 SINE B2 0 216 1 1 1706 247 296 61 26 chrX 147060940 147061072 -19589224 - MIRc SINE MIR -86 182 44 1 1706 351 0 0 0 chrX 147062263 147062302 -19587994 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 1 1706 515 194 46 0 chrX 147062517 147062625 -19587671 - L1MA6 LINE L1 -171 6129 6017 1 213 3462 33 2 0 chrX 147062668 147063063 -19587233 - MTA_Mm LTR MaLR 0 396 1 1 1707 943 274 75 16 chrX 147063616 147063924 -19586372 + MTD LTR MaLR 82 407 -12 1 1707 310 276 0 22 chrX 147063931 147064020 -19586276 - MIRb SINE MIR -89 179 93 1 1707 23484 20 0 0 chrX 147064963 147067651 -19582645 + L1Md_T LINE L1 2900 5586 -297 1 1707 8198 53 0 0 chrX 147067651 147068647 -19581649 + L1Md_T LINE L1 5587 6582 0 1 1707 249 108 0 0 chrX 147069407 147069444 -19580852 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 1 1707 395 302 23 31 chrX 147069444 147069574 -19580722 - RSINE1 SINE B4 -5 160 32 1 1707 312 272 80 47 chrX 147070097 147070483 -19579813 - L1MEe LINE L1 -3690 2318 1920 1 1707 290 274 8 17 chrX 147070696 147070815 -19579481 - Lx7 LINE L1 0 7696 7579 1 1707 221 154 0 0 chrX 147070815 147070854 -19579442 + (TCTG)n Simple_repeat Simple_repeat 3 41 0 1 1707 4742 223 71 88 chrX 147070872 147071520 -19578776 - Lx7 LINE L1 -284 7412 6742 1 1707 503 0 32 0 chrX 147071520 147071582 -19578714 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 1 1707 4742 223 71 88 chrX 147071582 147072305 -19577991 - Lx7 LINE L1 -955 6741 6064 1 1707 299 235 66 83 chrX 147072703 147072884 -19577412 - L1MEe LINE L1 -4705 1379 1202 1 1707 372 332 13 13 chrX 147072935 147073116 -19577180 + CT-rich Low_complexity Low_complexity 1 181 0 1 1707 298 107 36 0 chrX 147073447 147073503 -19576793 + (TTTC)n Simple_repeat Simple_repeat 2 59 0 1 1707 2241 56 7 0 chrX 147073558 147073842 -19576454 + L1_Mus1 LINE L1 6281 6566 -1 1 1707 248 272 237 0 chrX 147073939 147074053 -19576243 - MIR3 SINE MIR -64 144 4 1 1707 3447 151 118 14 chrX 147074922 147075549 -19574747 - RLTR17 LTR ERVK 0 692 1 1 1707 630 140 0 0 chrX 147075551 147075665 -19574631 + (TG)n Simple_repeat Simple_repeat 1 114 0 1 1707 261 263 0 56 chrX 147075685 147075810 -19574486 + (CATATA)n Simple_repeat Simple_repeat 4 121 0 1 1707 258 302 75 0 chrX 147076114 147076220 -19574076 - MIRc SINE MIR -63 205 92 1 1707 1251 130 130 0 chrX 147077395 147077595 -19572701 - URR1A DNA MER1_type 0 226 1 1 1707 378 0 0 0 chrX 147079275 147079317 -19570979 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1 1707 815 62 186 0 chrX 147079319 147079448 -19570848 - B2_Mm2 SINE B2 -42 153 1 1 1707 261 333 0 0 chrX 147084049 147084133 -19566163 + (CCCCAG)n Simple_repeat Simple_repeat 3 86 0 1 1707 485 310 113 33 chrX 147084444 147084781 -19565515 + MLT1B LTR MaLR 1 364 -26 1 1707 209 210 111 16 chrX 147087013 147087076 -19563220 + MIRb SINE MIR 172 240 -28 1 1707 213 219 59 34 chrX 147088910 147089028 -19561268 + (TCTG)n Simple_repeat Simple_repeat 4 124 0 1 1707 321 207 0 0 chrX 147090771 147090853 -19559443 + (CA)n Simple_repeat Simple_repeat 2 83 0 1 1707 226 316 0 0 chrX 147091169 147091264 -19559032 + C-rich Low_complexity Low_complexity 1 95 0 1 1707 34 55 0 0 chrX 147092320 147092375 -19557921 + AT_rich Low_complexity Low_complexity 1 55 0 1 1707 468 252 84 45 chrX 147092412 147092566 -19557730 + RSINE1 SINE B4 3 162 -3 1 1707 21 57 0 0 chrX 147092566 147092601 -19557695 + AT_rich Low_complexity Low_complexity 1 35 0 1 1707 24 0 0 0 chrX 147092645 147092669 -19557627 + AT_rich Low_complexity Low_complexity 1 24 0 1 1707 230 194 77 46 chrX 147092705 147092770 -19557526 + B1F2 SINE Alu 24 90 -59 1 1707 183 222 0 0 chrX 147092792 147092837 -19557459 + (CATATA)n Simple_repeat Simple_repeat 1 45 0 1 1707 547 143 10 10 chrX 147093054 147093153 -19557143 + PB1D9 SINE Alu 21 119 -1 1 1707 414 61 45 0 chrX 147093153 147093219 -19557077 + L1Md_F2 LINE L1 6514 6582 0 1 1707 1273 231 74 16 chrX 147093223 147093588 -19556708 + L1M2 LINE L1 2382 2767 -3376 1 1707 285 220 0 0 chrX 147093588 147093647 -19556649 + L1MC3 LINE L1 6088 6146 -1639 1 1707 9619 197 34 16 chrX 147093925 147094059 -19556237 - Lx6 LINE L1 -1 7459 7319 1 1707 188 0 74 0 chrX 147094059 147094086 -19556210 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1707 23143 193 34 19 chrX 147094086 147095625 -19554671 - Lx6 LINE L1 -142 7318 5745 1 1707 3428 135 44 129 chrX 147095625 147096000 -19554296 - RMER6A LTR ERVK 0 756 377 1 1707 1521 14 0 0 chrX 147096000 147096222 -19554074 + (TC)n Simple_repeat Simple_repeat 1 222 0 1 1707 3428 135 44 129 chrX 147096222 147096668 -19553628 - RMER6A LTR ERVK -380 376 5 1 1707 23143 155 41 57 chrX 147096668 147097452 -19552844 - Lx6 LINE L1 -136 5744 4983 1 1707 1168 121 11 6 chrX 147097452 147097626 -19552670 - B2_Mm2 SINE B2 -19 176 2 1 1707 23143 155 41 57 chrX 147097626 147100613 -19549683 - Lx6 LINE L1 -898 4982 2057 1 1707 789 97 0 0 chrX 147100613 147100747 -19549549 + (TC)n Simple_repeat Simple_repeat 2 135 0 1 1707 279 0 0 0 chrX 147100747 147100777 -19549519 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1707 23143 172 39 75 chrX 147100777 147102070 -19548226 - Lx6 LINE L1 -3824 2056 860 1 1707 595 294 82 34 chrX 147102088 147102356 -19547940 - Lx6 LINE L1 -7190 538 258 1 1707 2162 115 108 40 chrX 147102374 147102659 -19547637 + RMER19B LTR ERVK 464 763 -139 1 1707 1919 139 22 48 chrX 147102659 147103014 -19547282 - Lx2 LINE L1 0 6997 6652 1 1707 2162 115 108 40 chrX 147103014 147103128 -19547168 + RMER19B LTR ERVK 764 890 -12 1 1707 1679 211 32 56 chrX 147103142 147103518 -19546778 + Lx9 LINE L1 6489 6855 -789 1 1707 1834 149 58 12 chrX 147103521 147103846 -19546450 + Lx9 LINE L1 7135 7474 -170 1 1707 639 266 137 15 chrX 147103851 147104187 -19546109 - L1MC3 LINE L1 -1033 6752 6376 1 1707 639 298 16 16 chrX 147104170 147104416 -19545880 + L1_Mur3 LINE L1 71 316 -7396 1 1707 4748 177 47 63 chrX 147104428 147104974 -19545322 - L1_Rod LINE L1 -9 5838 5323 1 1707 204 67 0 0 chrX 147104974 147105004 -19545292 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 1707 4748 177 47 63 chrX 147105004 147105562 -19544734 - L1_Rod LINE L1 -525 5322 4752 1 1707 505 206 20 0 chrX 147105718 147105820 -19544476 - PB1D9 SINE Alu -6 114 11 1 1707 696 209 12 112 chrX 147105823 147105994 -19544302 - L1_Rod LINE L1 -1084 4763 4606 1 1707 279 0 0 0 chrX 147105994 147106025 -19544271 + (ATTG)n Simple_repeat Simple_repeat 2 32 0 1 1707 696 209 12 112 chrX 147106025 147106095 -19544201 - L1_Rod LINE L1 -1242 4605 4546 1 1707 3266 81 21 0 chrX 147106090 147106520 -19543776 - Lx3B LINE L1 -386 6587 6149 1 1707 2982 38 6 0 chrX 147106832 147107176 -19543120 - ORR1A0 LTR MaLR 0 346 1 1 1707 774 283 95 24 chrX 147107290 147107660 -19542636 - L1M2a LINE L1 -2199 4965 4570 1 1707 5478 120 10 18 chrX 147107635 147108465 -19541831 - L1_Mus3 LINE L1 -681 5202 4380 1 1707 7097 78 71 16 chrX 147108464 147109821 -19540475 + L1_Mus3 LINE L1 5206 6638 0 1 1707 574 205 161 12 chrX 147109821 147110120 -19540176 - L1M2a LINE L1 -2558 4603 4216 1 1707 480 337 93 35 chrX 147110157 147110538 -19539758 - L1M2a LINE L1 -6743 425 4 1 1707 1197 42 7 0 chrX 147110604 147110748 -19539548 + B1_Mm SINE Alu 2 146 -1 1 1707 590 39 0 13 chrX 147110749 147110827 -19539469 + (GAAAA)n Simple_repeat Simple_repeat 5 81 0 1 1707 301 325 0 25 chrX 147110883 147110962 -19539334 + RSINE1 SINE B4 89 165 0 1 1707 27 29 0 0 chrX 147110975 147111009 -19539287 + AT_rich Low_complexity Low_complexity 1 34 0 1 1707 2784 164 84 12 chrX 147111314 147112235 -19538061 + L1_Rod LINE L1 791 1774 -4073 1 1707 1208 215 31 35 chrX 147112235 147112552 -19537744 + BGLII_B LTR ERVK 1 323 -254 1 1707 421 189 21 0 chrX 147112590 147112685 -19537611 + Lx3B LINE L1 6877 6973 0 1 1707 216 97 0 0 chrX 147112685 147112716 -19537580 + (GAAA)n Simple_repeat Simple_repeat 1 31 0 1 1707 758 254 179 87 chrX 147113064 147113873 -19536423 + L1MA6 LINE L1 3972 4855 -1288 1 1707 1517 224 75 32 chrX 147114182 147114218 -19536078 + L1MA6 LINE L1 4842 4877 -1266 1 1707 3161 66 11 130 chrX 147114218 147114757 -19535539 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1707 1533 225 75 32 chrX 147114757 147115296 -19535000 + L1MA6 LINE L1 4878 5456 -844 1 1707 2179 100 18 21 chrX 147115296 147115622 -19534674 - ORR1A2 LTR MaLR 0 327 3 1 1707 1533 244 83 37 chrX 147115622 147116015 -19534281 + L1MA6 LINE L1 5457 5848 -452 1 1707 2518 86 3 0 chrX 147116015 147116341 -19533955 + ORR1A2 LTR MaLR 1 327 0 1 1707 1533 268 74 36 chrX 147116341 147116631 -19533665 + L1MA6 LINE L1 5849 6172 -6 1 1707 922 288 126 38 chrX 147116675 147117464 -19532832 + L1MD3 LINE L1 6882 7949 -46 1 1707 353 320 108 6 chrX 147117512 147117688 -19532608 - L1M5 LINE L1 -444 5796 5603 1 1707 646 348 47 4 chrX 147118022 147118279 -19532017 - LTR75 LTR ERVL 0 562 295 1 1707 240 281 35 0 chrX 147118298 147118355 -19531941 - LTR75 LTR ERVL -414 148 90 1 1707 1807 89 37 7 chrX 147118356 147118627 -19531669 + L1Md_F2 LINE L1 6302 6580 -2 1 1707 1089 177 0 34 chrX 147119139 147119344 -19530952 + Lx5 LINE L1 6728 6925 -125 1 1707 354 121 0 0 chrX 147119351 147119417 -19530879 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 1707 319 210 0 0 chrX 147119418 147119499 -19530797 - Lx9 LINE L1 -147 7497 7417 1 1707 7924 32 1 1 chrX 147119523 147120877 -19529419 - L1Md_F3 LINE L1 -12 6572 5219 1 1707 238 132 0 0 chrX 147120876 147120914 -19529382 - Lx9 LINE L1 -228 7416 7379 1 1707 677 211 0 14 chrX 147120926 147121070 -19529226 + Lx9 LINE L1 7242 7383 -261 1 1707 4949 24 0 10 chrX 147121101 147121683 -19528613 - L1Md_F2 LINE L1 -1 6581 6006 1 1707 486 0 0 0 chrX 147121954 147122008 -19528288 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 1707 653 216 0 80 chrX 147122469 147122620 -19527676 - B1_Mur1 SINE Alu -1 148 10 1 1707 1432 231 154 35 chrX 147124262 147124769 -19525527 - Lx8 LINE L1 -5 7468 6902 1 1707 347 264 104 31 chrX 147124771 147124892 -19525404 - MTEb LTR MaLR -8 386 189 1 1707 295 298 16 31 chrX 147124921 147125049 -19525247 + Lx7 LINE L1 7175 7300 -396 1 1707 2995 61 0 0 chrX 147125117 147125528 -19524768 - L1_Mm LINE L1 -1501 4382 3972 1 1707 2212 34 0 0 chrX 147125526 147125795 -19524501 + L1Md_F2 LINE L1 5318 5586 -297 1 1707 7209 59 20 56 chrX 147125795 147126828 -19523468 + L1Md_F2 LINE L1 5587 6582 0 1 1707 1646 195 154 77 chrX 147126884 147127378 -19522918 + MT2A LTR ERVL 2 533 0 1 1707 451 210 131 38 chrX 147127737 147127920 -19522376 + L1MA5A LINE L1 5695 5894 -403 1 1707 1821 106 21 21 chrX 147127920 147128199 -19522097 + ORR1B1 LTR MaLR 114 392 -2 1 1707 1162 49 0 7 chrX 147128348 147128492 -19521804 + B1_Mus2 SINE Alu 2 144 -3 1 1707 309 26 0 0 chrX 147128492 147128530 -19521766 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 1 1707 451 182 11 11 chrX 147128614 147128703 -19521593 - RMER6A LTR ERVK 0 756 668 1 1707 286 57 0 0 chrX 147128703 147128738 -19521558 - RMER6A LTR ERVK -654 102 68 2 1707 3423 130 49 42 chrX 147128765 147129414 -19520882 - RMER6-int LTR ERVK -2 3175 2522 2 1707 1285 176 14 31 chrX 147129429 147129722 -19520574 - RMER6-int LTR ERVK -2574 603 316 2 1707 615 117 0 0 chrX 147129745 147129839 -19520457 + (TTCC)n Simple_repeat Simple_repeat 3 96 0 2 1707 2309 84 83 14 chrX 147129841 147130201 -19520095 - L1_Mus3 LINE L1 -1 6637 6253 2 1707 5197 93 12 6 chrX 147130203 147130936 -19519360 + Lx LINE L1 5911 6648 -6 2 1707 342 61 0 0 chrX 147131956 147132005 -19518291 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 2 1707 1067 43 0 80 chrX 147132005 147132155 -19518141 - B1_Mus1 SINE Alu -10 138 1 2 1707 518 280 81 29 chrX 147132443 147132596 -19517700 + B3A SINE B2 1 164 -34 2 1707 225 0 0 0 chrX 147132596 147132621 -19517675 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 1707 518 280 81 29 chrX 147132621 147132640 -19517656 + B3A SINE B2 165 182 -16 2 1707 25 51 0 0 chrX 147132665 147132704 -19517592 + AT_rich Low_complexity Low_complexity 1 39 0 2 1707 30121 24 1 0 chrX 147132775 147137176 -19513120 - L1Md_T LINE L1 0 6582 2177 2 1707 726 50 0 0 chrX 147137161 147137260 -19513036 - L1Md_T LINE L1 -5522 1202 1104 2 1707 415 225 12 0 chrX 147137476 147137556 -19512740 + ID4 SINE ID 1 81 -2 2 1707 252 0 0 0 chrX 147139394 147139422 -19510874 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 1707 525 250 182 23 chrX 147139422 147139598 -19510698 - B3 SINE B2 -12 204 1 2 1707 2817 90 15 0 chrX 147140221 147140633 -19509663 - Lx4A LINE L1 -1054 6004 5587 2 1707 462 137 0 0 chrX 147140640 147140735 -19509561 + Lx4A LINE L1 6018 6112 -946 2 1707 276 355 36 9 chrX 147141371 147141482 -19508814 + LTR75 LTR ERVL 76 189 -373 2 1707 833 335 22 15 chrX 147142308 147142578 -19507718 + LTR75 LTR ERVL 226 497 -65 2 1707 288 111 0 0 chrX 147143260 147143314 -19506982 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 2 1707 225 0 0 0 chrX 147143459 147143484 -19506812 + (CACCC)n Simple_repeat Simple_repeat 1 25 0 2 1707 495 0 0 0 chrX 147144657 147144712 -19505584 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1707 1128 56 7 0 chrX 147145479 147145623 -19504673 - B1_Mus2 SINE Alu -2 145 1 2 1707 193 323 58 51 chrX 147146611 147146748 -19503548 + L4 LINE RTE 1690 1827 -202 2 1707 271 286 11 0 chrX 147146969 147147060 -19503236 + L1MEc LINE L1 118 209 -6191 2 1707 578 284 87 18 chrX 147147235 147147511 -19502785 + L1M3 LINE L1 5265 5559 -609 2 1707 273 233 0 16 chrX 147147520 147147581 -19502715 + MTEb LTR MaLR 207 266 -113 2 1707 1416 247 95 22 chrX 147147638 147148230 -19502066 + L1_Mur3 LINE L1 3957 4591 -1289 2 1707 37410 33 2 6 chrX 147148235 147154615 -19495681 - L1Md_T LINE L1 0 6582 232 2 1707 1169 111 0 6 chrX 147154694 147154875 -19495421 - L1_Mus4 LINE L1 0 6636 6457 2 1707 2722 59 0 0 chrX 147154875 147155231 -19495065 + L1_Mus4 LINE L1 6024 6379 -257 2 1707 1413 288 40 5 chrX 147155229 147155874 -19494422 + L1_Mur3 LINE L1 5044 5748 -132 2 1707 1624 27 0 0 chrX 147155877 147156063 -19494233 + B2_Mm1a SINE B2 1 186 -7 2 1707 406 338 66 5 chrX 147156075 147156271 -19494025 + L1_Mur3 LINE L1 133 340 -7388 2 1707 281 258 0 0 chrX 147156341 147156407 -19493889 - Lx7 LINE L1 -1954 5742 5677 2 1707 521 299 85 0 chrX 147156410 147156587 -19493709 + L1_Mur3 LINE L1 128 319 -7409 2 1707 5171 165 24 30 chrX 147156582 147157980 -19492316 + L1_Mur3 LINE L1 860 2262 -3618 2 1707 821 156 39 44 chrX 147157980 147158161 -19492135 + Lx3A LINE L1 6800 6979 -2 2 1707 4040 146 20 12 chrX 147158178 147158941 -19491355 + L1_Mur3 LINE L1 3307 4075 -1805 2 1707 881 316 77 17 chrX 147158936 147158961 -19491335 + Lx8 LINE L1 6914 6938 -535 2 1707 790 42 17 8 chrX 147158961 147159081 -19491215 + L1Md_F3 LINE L1 6463 6583 -1 2 1707 881 316 77 17 chrX 147159081 147159574 -19490722 + Lx8 LINE L1 6939 7462 -11 2 1707 427 296 197 0 chrX 147159613 147159846 -19490450 + L1MB1 LINE L1 5885 6163 -5 2 1707 29 28 0 0 chrX 147159951 147159987 -19490309 + AT_rich Low_complexity Low_complexity 1 36 0 2 1707 1538 222 112 24 chrX 147160140 147160514 -19489782 - MTD LTR MaLR -12 407 1 2 1707 396 0 0 0 chrX 147160515 147160559 -19489737 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 1707 1942 208 43 138 chrX 147160745 147161420 -19488876 - RMER19C LTR ERVK 0 611 1 2 1707 384 297 39 33 chrX 147161579 147161732 -19488564 - Lx8 LINE L1 -235 7238 7085 2 1707 569 261 34 34 chrX 147162061 147162208 -19488088 - B1_Mur2 SINE Alu 0 149 3 2 1707 30 0 0 0 chrX 147162211 147162241 -19488055 + AT_rich Low_complexity Low_complexity 1 30 0 2 1707 545 241 19 9 chrX 147162258 147162388 -19487908 - MTB_Mm LTR MaLR 0 407 247 2 1707 2331 160 34 10 chrX 147162389 147162868 -19487428 + Lx4A LINE L1 696 1242 -5844 2 1707 1015 115 0 0 chrX 147162873 147163030 -19487266 + L1Md_F2 LINE L1 3325 3481 -2402 2 1707 1940 20 8 0 chrX 147163024 147163268 -19487028 - L1Md_F2 LINE L1 -528 6054 5809 2 1707 4342 44 0 17 chrX 147163268 147163802 -19486494 + L1Md_F2 LINE L1 6042 6566 -16 2 1707 15849 62 1 0 chrX 147163811 147165930 -19484366 + L1Md_F2 LINE L1 3467 5586 -297 2 1707 7939 55 3 0 chrX 147165931 147166919 -19483377 + L1Md_F2 LINE L1 5588 6578 -4 2 1707 3523 128 22 26 chrX 147166937 147167581 -19482715 - L1_Mur2 LINE L1 -2213 3664 3024 2 1707 39075 45 0 4 chrX 147167582 147174609 -19475687 - L1Md_A LINE L1 0 6585 2 2 1707 5551 89 12 29 chrX 147174608 147175461 -19474835 - L1_Mur2 LINE L1 -3772 2105 1268 2 1707 4210 76 0 8 chrX 147175462 147175992 -19474304 - L1Md_F2 LINE L1 0 6582 6057 2 1707 10918 87 1 34 chrX 147175992 147178394 -19471902 - L1Md_F LINE L1 -3260 2623 304 2 1707 6606 142 14 39 chrX 147178392 147179568 -19470728 + Lx4A LINE L1 3652 4798 -1079 2 1707 4522 149 67 37 chrX 147179569 147180444 -19469852 - RLTR13D6 LTR ERVK 0 902 1 2 1707 9150 128 30 11 chrX 147180444 147182651 -19467645 + Lx4A LINE L1 4794 7047 -11 2 1707 653 203 17 0 chrX 147182661 147182779 -19467517 - MTC LTR MaLR -106 315 196 2 1707 3189 39 31 3 chrX 147182945 147183328 -19466968 - L1Md_F3 LINE L1 0 6584 6191 2 1707 1388 97 10 5 chrX 147183328 147183524 -19466772 - MTC LTR MaLR -218 203 7 2 1707 442 110 52 52 chrX 147183524 147183620 -19466676 - Lx9 LINE L1 -32 7612 7517 2 1707 378 0 0 0 chrX 147183622 147183664 -19466632 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1707 668 251 30 0 chrX 147183665 147183832 -19466464 - Lx9 LINE L1 -385 7259 7088 2 1707 277 327 33 58 chrX 147183974 147184094 -19466202 - PB1D7 SINE Alu 0 120 4 2 1707 1219 82 0 0 chrX 147184298 147184444 -19465852 - B1_Mm SINE Alu 0 147 2 2 1707 589 299 89 6 chrX 147184607 147184775 -19465521 + B3A SINE B2 1 182 -16 2 1707 1170 277 132 16 chrX 147184923 147185418 -19464878 - Lx6 LINE L1 -26 7434 6506 2 1707 350 322 74 8 chrX 147185447 147185569 -19464727 + Lx5 LINE L1 6248 6377 -673 2 1707 22 35 0 0 chrX 147185578 147185607 -19464689 + AT_rich Low_complexity Low_complexity 1 29 0 2 1707 1820 142 42 11 chrX 147185607 147185929 -19464367 - Lx3B LINE L1 -8 6973 6604 2 1707 3470 99 73 19 chrX 147185926 147186449 -19463847 + Lx3A LINE L1 6076 6626 -355 2 1707 23 33 0 0 chrX 147186449 147186479 -19463817 + AT_rich Low_complexity Low_complexity 1 30 0 2 1707 462 318 19 31 chrX 147186482 147186644 -19463652 - RSINE1 SINE B4 -2 163 4 2 1707 1522 80 0 5 chrX 147186857 147187058 -19463238 + L1_Mur1 LINE L1 4829 5028 -858 2 1707 33198 86 19 21 chrX 147187058 147192527 -19457769 + L1Md_F2 LINE L1 217 5586 -297 2 1707 7136 116 4 7 chrX 147192527 147193519 -19456777 + L1Md_F2 LINE L1 5587 6575 -7 2 1707 219 139 0 0 chrX 147193531 147193567 -19456729 + (GGAGAA)n Simple_repeat Simple_repeat 5 40 0 2 213 8759 105 37 73 chrX 147193567 147195653 -19454643 + Lx3B LINE L1 5014 6968 -5 2 1708 2762 85 14 0 chrX 147196030 147196395 -19453901 + Lx3_Mus LINE L1 6637 7006 -3 2 1708 21 36 0 0 chrX 147196395 147196423 -19453873 + AT_rich Low_complexity Low_complexity 1 28 0 2 1708 242 291 7 146 chrX 147196465 147196525 -19453771 + MLT2C1 LTR ERVL 420 468 -95 2 1708 2499 80 48 0 chrX 147196525 147196837 -19453459 + ORR1A2 LTR MaLR 1 327 0 2 1708 242 291 7 146 chrX 147196837 147196913 -19453383 + MLT2C1 LTR ERVL 469 537 -26 2 1708 435 279 120 24 chrX 147196951 147197160 -19453136 + L1M5 LINE L1 5567 5795 -384 2 1708 1170 141 141 0 chrX 147197329 147197527 -19452769 - URR1A DNA MER1_type 0 226 1 2 1708 1103 121 237 18 chrX 147197724 147197943 -19452353 - ORR1B2 LTR MaLR -53 314 48 2 1708 191 312 0 30 chrX 147198009 147198075 -19452221 + MIR SINE MIR 79 142 -126 2 1708 550 170 20 10 chrX 147198533 147198634 -19451662 + Lx7 LINE L1 7177 7278 -418 2 1708 694 196 21 0 chrX 147198648 147198791 -19451505 - Lx7 LINE L1 -281 7415 7270 2 1708 739 299 10 20 chrX 147198795 147198993 -19451303 + MLT1A0 LTR MaLR 126 321 -44 2 1708 285 329 0 12 chrX 147199179 147199262 -19451034 + Tigger5 DNA MER2_type 156 237 -2169 2 1708 36 53 0 0 chrX 147199298 147199355 -19450941 + AT_rich Low_complexity Low_complexity 1 57 0 2 1708 1401 82 16 42 chrX 147199584 147199774 -19450522 + B2_Mm2 SINE B2 2 186 -9 2 1708 1317 299 85 18 chrX 147200422 147200871 -19449425 - Lx8 LINE L1 -187 7286 6808 2 1708 909 328 52 30 chrX 147200884 147201214 -19449082 + MLT1A0 LTR MaLR 27 363 -2 2 1708 1116 303 30 43 chrX 147201755 147202324 -19447972 - Lx8 LINE L1 -1477 5996 5470 2 1708 327 189 53 0 chrX 147202335 147202430 -19447866 + CT-rich Low_complexity Low_complexity 4 103 0 2 1708 8484 128 25 7 chrX 147202448 147204645 -19445651 - Lx LINE L1 -3 6651 4424 2 1708 1325 107 37 11 chrX 147204645 147204834 -19445462 - B2_Mm2 SINE B2 0 195 2 2 1708 3988 126 19 24 chrX 147204834 147205398 -19444898 - Lx LINE L1 -5537 1120 549 2 1708 314 251 129 33 chrX 147205404 147205627 -19444669 - Lx8 LINE L1 -867 5276 5006 2 1708 273 320 12 0 chrX 147205705 147205821 -19444475 + ID4_ SINE ID 10 128 -24 2 1708 481 133 10 10 chrX 147205832 147205931 -19444365 + GA-rich Low_complexity Low_complexity 2 100 0 2 1708 25 31 0 0 chrX 147205990 147206022 -19444274 + AT_rich Low_complexity Low_complexity 1 32 0 2 1708 4578 170 77 48 chrX 147206145 147206697 -19443599 - L1_Mur3 LINE L1 -1098 4782 4250 2 1708 472 106 0 34 chrX 147206697 147206785 -19443511 + Lx2A LINE L1 6923 7007 -1 2 1708 3578 43 2 9 chrX 147206788 147207212 -19443084 + L1Md_F2 LINE L1 6162 6582 0 2 1708 4578 170 77 48 chrX 147207212 147207562 -19442734 - L1_Mur3 LINE L1 -1631 4249 3876 2 1708 985 168 194 6 chrX 147207562 147207742 -19442554 - B3 SINE B2 -1 215 2 2 1708 4578 166 22 261 chrX 147207742 147208502 -19441794 - L1_Mur3 LINE L1 -1732 4145 3513 2 1708 8703 35 6 0 chrX 147208502 147209473 -19440823 + L1Md_T LINE L1 5605 6581 -1 2 1708 698 151 24 0 chrX 147209481 147209607 -19440689 + L1_Mur3 LINE L1 1320 1448 -4432 2 1708 1349 179 14 29 chrX 147209609 147209885 -19440411 + L1_Mur3 LINE L1 2817 3088 -2792 2 1708 2359 92 41 3 chrX 147209912 147210227 -19440069 - ORR1A2 LTR MaLR 0 327 1 2 1708 450 102 0 0 chrX 147210227 147210286 -19440010 - ORR1A2-int LTR MaLR 0 1963 1905 2 1708 1298 198 40 54 chrX 147210377 147210655 -19439641 - MT2C_Mm LTR ERVL -190 285 12 2 1708 765 100 0 8 chrX 147210659 147210780 -19439516 - L1_Mur3 LINE L1 -2509 3377 3258 2 1708 6997 67 6 0 chrX 147210791 147211632 -19438664 - L1_Mus3 LINE L1 -11 6627 5782 2 1708 17715 82 55 2 chrX 147211632 147214958 -19435338 - L1Md_F2 LINE L1 -3 6579 3057 2 1708 1674 211 98 23 chrX 147215810 147216199 -19434097 - MTD LTR MaLR 0 419 2 3 1708 481 232 81 0 chrX 147216739 147216838 -19433458 + PB1D10 SINE Alu 6 112 -5 3 1708 309 247 30 20 chrX 147217321 147217336 -19432960 + ID_B1 SINE B4 124 223 -1 3 1708 327 250 36 0 chrX 147217336 147217420 -19432876 + B1F SINE Alu 62 148 -1 3 1708 1717 5 0 0 chrX 147217548 147217737 -19432559 + L1Md_T LINE L1 6394 6582 0 3 1708 6581 137 56 8 chrX 147217848 147219729 -19430567 + Lx LINE L1 4686 6648 -6 3 1708 1823 128 2 3 chrX 147219716 147220016 -19430280 + L1_Mm LINE L1 5299 5601 -282 3 1708 978 42 0 16 chrX 147220012 147220133 -19430163 - L1_Mus4 LINE L1 -872 5764 5646 3 1708 3823 149 57 22 chrX 147220134 147220766 -19429530 + Lx2B LINE L1 6344 6997 -3 3 1708 389 267 91 24 chrX 147220889 147221054 -19429242 + L1_Rod LINE L1 2070 2245 -3602 3 1708 315 296 25 0 chrX 147221045 147221126 -19429170 + Lx8 LINE L1 6265 6347 -1126 3 1708 1428 297 14 19 chrX 147221121 147221537 -19428759 + Lx8 LINE L1 6499 6912 -561 3 1708 1713 245 43 18 chrX 147221634 147222391 -19427905 + L1_Rod LINE L1 902 1677 -4170 3 1708 1806 146 35 20 chrX 147222391 147222733 -19427563 + RLTR40 LTR ERVK 1 347 -470 3 1708 3448 104 2 8 chrX 147222737 147223211 -19427085 + L1_Mur1 LINE L1 5332 5802 -84 3 1708 2181 183 79 11 chrX 147223210 147223653 -19426643 + Lx LINE L1 6176 6648 -6 3 1708 8043 89 34 5 chrX 147223653 147224818 -19425478 + Lx3A LINE L1 5783 6981 0 3 1708 988 186 69 91 chrX 147224874 147225021 -19425275 + RLTR40 LTR ERVK 506 642 -175 3 1708 1170 72 0 23 chrX 147225021 147225193 -19425103 + L1Md_F2 LINE L1 6414 6581 -1 3 1708 988 186 27 118 chrX 147225193 147225386 -19424910 + RLTR40 LTR ERVK 618 803 -14 3 1708 3431 246 66 32 chrX 147225398 147226597 -19423699 + L1_Rod LINE L1 1672 2911 -2936 3 1708 1011 274 76 7 chrX 147226695 147227117 -19423179 - L1M2 LINE L1 -1544 4599 4149 3 1708 899 279 131 34 chrX 147227213 147227740 -19422556 - Lx9 LINE L1 -15 7629 7052 3 1708 284 197 16 0 chrX 147227826 147227887 -19422409 - ORR1B1-int LTR MaLR -373 1136 1075 3 1708 16348 154 48 53 chrX 147227888 147229870 -19420426 + Lx6 LINE L1 2552 4450 -1427 3 1708 917 139 76 22 chrX 147229870 147230054 -19420242 + B2_Mm2 SINE B2 2 195 0 3 1708 16348 164 50 44 chrX 147230054 147231785 -19418511 + Lx6 LINE L1 4451 6268 -1192 3 1708 1871 321 85 39 chrX 147231796 147232773 -19417523 + Lx5 LINE L1 6008 7032 -18 3 1708 203 61 30 0 chrX 147232773 147232806 -19417490 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 3 1708 1871 321 85 39 chrX 147232806 147232825 -19417471 + Lx5 LINE L1 7033 7050 0 3 1708 645 14 0 0 chrX 147233803 147233877 -19416419 + (GA)n Simple_repeat Simple_repeat 2 75 0 3 1708 187 369 0 12 chrX 147236839 147236924 -19413372 + L4 LINE RTE 1744 1827 -202 3 1708 225 0 0 0 chrX 147237311 147237336 -19412960 + (CCA)n Simple_repeat Simple_repeat 1 25 0 3 1708 1605 181 152 3 chrX 147237407 147237750 -19412546 + ORR1B1 LTR MaLR 1 394 0 3 1708 592 304 43 29 chrX 147237863 147238070 -19412226 - B4A SINE B4 -81 211 2 3 1708 389 239 40 64 chrX 147238883 147239008 -19411288 + ID_B1 SINE B4 102 223 -1 3 1708 210 327 0 0 chrX 147239446 147239501 -19410795 - ID SINE ID -144 80 26 3 1708 221 289 0 0 chrX 147239453 147239505 -19410791 - ID4_ SINE ID -11 72 21 3 1708 395 290 16 8 chrX 147239526 147239651 -19410645 - B1F SINE Alu -6 143 18 3 1708 513 262 56 12 chrX 147240964 147241126 -19409170 + MER117 DNA MER1_type 1 169 -28 3 1708 249 350 0 0 chrX 147241377 147241480 -19408816 + (CCA)n Simple_repeat Simple_repeat 3 105 0 3 1708 202 415 6 6 chrX 147241494 147241659 -19408637 + (CCCCAG)n Simple_repeat Simple_repeat 6 170 0 3 1708 197 300 148 32 chrX 147241852 147242007 -19408289 + MIRb SINE MIR 60 232 -36 3 1708 180 97 0 0 chrX 147242584 147242615 -19407681 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1708 335 257 0 0 chrX 147242624 147242698 -19407598 + ID_B1 SINE B4 87 160 -64 3 1708 329 306 32 24 chrX 147242698 147242748 -19407548 + B1F SINE Alu 6 130 -19 3 1708 624 170 50 119 chrX 147242773 147242933 -19407363 - B1_Mur4 SINE Alu 0 150 2 3 1708 223 317 19 19 chrX 147243003 147243109 -19407187 + MIRb SINE MIR 79 184 -84 3 1708 513 44 0 0 chrX 147244435 147244503 -19405793 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 1708 195 304 0 67 chrX 147246192 147246252 -19404044 + L2b LINE L2 3229 3284 -91 3 1708 189 0 0 0 chrX 147248856 147248877 -19401419 + (CAGCC)n Simple_repeat Simple_repeat 1 21 0 3 1708 183 256 0 0 chrX 147248942 147248985 -19401311 - MIRb SINE MIR -216 52 10 3 1708 323 304 7 21 chrX 147249329 147249470 -19400826 - L1MC LINE L1 -2065 5817 5679 3 1708 257 347 152 35 chrX 147250249 147250625 -19399671 - L2 LINE L2 -665 2754 2335 3 1708 198 0 0 0 chrX 147251355 147251377 -19398919 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 3 1708 453 326 7 0 chrX 147251389 147251524 -19398772 + RSINE1 SINE B4 14 149 -16 3 1708 25 0 0 0 chrX 147251592 147251617 -19398679 + AT_rich Low_complexity Low_complexity 1 25 0 3 1708 236 100 25 0 chrX 147251891 147251931 -19398365 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 3 1708 748 111 14 20 chrX 147252114 147252261 -19398035 + (CCCCCT)n Simple_repeat Simple_repeat 1 146 0 3 1708 681 171 28 6 chrX 147252269 147252445 -19397851 + CT-rich Low_complexity Low_complexity 1 180 0 3 1708 336 109 36 0 chrX 147252451 147252506 -19397790 + (TTCTCC)n Simple_repeat Simple_repeat 3 59 0 3 1708 832 142 17 17 chrX 147252507 147252686 -19397610 + CT-rich Low_complexity Low_complexity 2 180 0 3 1708 573 149 17 39 chrX 147252705 147252886 -19397410 + CT-rich Low_complexity Low_complexity 1 177 0 3 1708 495 215 9 53 chrX 147252893 147253006 -19397290 - B1_Mur2 SINE Alu -20 129 22 3 1708 195 42 0 0 chrX 147253075 147253099 -19397197 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 1708 3454 30 2 0 chrX 147253814 147254209 -19396087 + MTA_Mm LTR MaLR 1 396 0 3 1708 9701 20 3 0 chrX 147254209 147255304 -19394992 + MTA_Mm-int LTR MaLR 1 1098 0 3 1708 3414 35 2 0 chrX 147255304 147255699 -19394597 + MTA_Mm LTR MaLR 1 396 0 3 1708 432 291 21 7 chrX 147255933 147256075 -19394221 + B1F2 SINE Alu 1 144 -5 3 1708 2423 196 53 15 chrX 147256434 147256978 -19393318 - Lx9 LINE L1 -5 7639 7075 3 1708 777 140 21 30 chrX 147256981 147257219 -19393077 + GA-rich Low_complexity Low_complexity 1 236 0 3 1708 742 142 25 16 chrX 147257228 147257350 -19392946 - Lx9 LINE L1 -578 7066 6944 3 1708 1272 175 142 15 chrX 147257346 147257613 -19392683 + Lx9 LINE L1 6630 6930 -714 3 1708 274 286 0 11 chrX 147257781 147257873 -19392423 - HAL1 LINE L1 -343 2164 2074 3 1708 243 79 0 0 chrX 147257915 147257953 -19392343 + (A)n Simple_repeat Simple_repeat 1 38 0 3 1708 824 303 40 91 chrX 147258050 147258253 -19392043 - L2a LINE L2 0 3426 3220 3 1708 398 269 37 0 chrX 147258253 147258361 -19391935 + PB1D10 SINE Alu 2 113 -4 3 1708 824 303 40 91 chrX 147258361 147258389 -19391907 - L2a LINE L2 -207 3219 3205 3 1708 185 0 0 39 chrX 147258389 147258415 -19391881 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 1708 824 303 40 91 chrX 147258415 147258712 -19391584 - L2a LINE L2 -222 3204 2924 3 1708 619 262 0 0 chrX 147258952 147259097 -19391199 - B1F SINE Alu -2 147 3 3 1708 304 193 52 52 chrX 147259107 147259222 -19391074 - Lx7 LINE L1 -4 7692 7578 3 1708 384 367 60 28 chrX 147259406 147259770 -19390526 - HAL1 LINE L1 -1315 1192 817 3 1708 1077 131 0 0 chrX 147259852 147260028 -19390268 + (TTC)n Simple_repeat Simple_repeat 3 178 0 3 1708 233 119 0 23 chrX 147260034 147260077 -19390219 + (TCTCC)n Simple_repeat Simple_repeat 1 42 0 3 1708 429 312 14 28 chrX 147260079 147260221 -19390075 - ID_B1 SINE B4 -84 140 1 3 1708 246 342 16 8 chrX 147260588 147260709 -19389587 - B1_Mus1 SINE Alu 0 148 27 3 1708 312 373 20 7 chrX 147260795 147260946 -19389350 - MIR SINE MIR -107 155 3 3 1708 266 343 208 9 chrX 147261743 147261955 -19388341 - MIRb SINE MIR -6 262 9 3 1708 230 229 33 125 chrX 147262277 147262397 -19387899 + MER5A1 DNA MER1_type 17 125 -41 3 1708 473 316 99 21 chrX 147262807 147263040 -19387256 + MIR SINE MIR 9 259 -3 3 1708 184 242 58 101 chrX 147263092 147263161 -19387135 - L2c LINE L2 -46 3341 3276 3 1708 618 14 0 0 chrX 147263162 147263233 -19387063 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 1708 369 0 0 0 chrX 147263648 147263689 -19386607 + (CTATA)n Simple_repeat Simple_repeat 5 45 0 3 1708 759 246 32 59 chrX 147264143 147264363 -19385933 + ID_B1 SINE B4 1 214 -10 3 1708 423 0 0 0 chrX 147265983 147266030 -19384266 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 3 1708 261 324 45 0 chrX 147266056 147266167 -19384129 + PB1D10 SINE Alu 1 116 -1 3 1708 924 249 24 0 chrX 147266198 147266403 -19383893 + B3 SINE B2 3 212 -4 3 1708 3694 148 81 23 chrX 147266793 147267451 -19382845 - RMER1B Other Other 0 1066 371 3 1708 289 263 0 0 chrX 147267463 147267520 -19382776 - B4 SINE B4 -212 80 24 3 1708 29 0 0 0 chrX 147267541 147267570 -19382726 + AT_rich Low_complexity Low_complexity 1 29 0 3 1708 339 156 0 135 chrX 147267662 147267736 -19382560 + B1F SINE Alu 47 142 -7 3 1708 368 189 14 0 chrX 147267747 147267821 -19382475 + B1F1 SINE Alu 74 148 -1 3 1708 1930 192 34 12 chrX 147267898 147268310 -19381986 + MTC LTR MaLR 1 421 0 3 1708 3781 209 141 41 chrX 147268310 147269296 -19381000 + MTC-int LTR MaLR 1 1095 -163 3 1708 5709 46 1 21 chrX 147269296 147270012 -19380284 - L1Md_F2 LINE L1 -2 6580 5879 3 1708 3781 209 141 41 chrX 147270012 147270167 -19380129 + MTC-int LTR MaLR 1096 1256 -2 3 1708 184 30 0 57 chrX 147270193 147270228 -19380068 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 3 1708 1667 186 16 39 chrX 147270239 147270602 -19379694 + MTC LTR MaLR 12 366 -55 3 1708 2753 181 22 6 chrX 147270602 147271102 -19379194 - Lx9 LINE L1 -296 7348 6841 3 1708 743 182 98 0 chrX 147271102 147271245 -19379051 - Lx9 LINE L1 -925 6719 6563 3 1708 623 97 25 42 chrX 147271256 147271374 -19378922 - Lx2B LINE L1 -1 6999 6884 3 1708 888 102 0 0 chrX 147271375 147271493 -19378803 + Lx2B LINE L1 6500 6617 -383 3 1708 243 320 46 33 chrX 147272200 147272352 -19377944 + MIR SINE MIR 78 231 -31 3 1708 2273 273 136 30 chrX 147272482 147273951 -19376345 - Lx8 LINE L1 -2 7471 5847 3 1708 676 211 23 0 chrX 147274994 147275122 -19375174 + B1_Mur1 SINE Alu 6 136 -13 3 1708 777 142 0 0 chrX 147275125 147275266 -19375030 + (GAAA)n Simple_repeat Simple_repeat 3 143 0 3 1708 1583 193 152 3 chrX 147275986 147276329 -19373967 - ORR1B1 LTR MaLR 0 394 1 3 1708 552 30 0 0 chrX 147279856 147279922 -19370374 + (TC)n Simple_repeat Simple_repeat 2 67 0 4 1708 842 255 27 0 chrX 147280999 147281187 -19369109 - ID_B1 SINE B4 -27 197 5 4 1708 220 355 27 0 chrX 147281225 147281335 -19368961 + MIR SINE MIR 138 250 -12 4 1708 373 252 84 0 chrX 147281929 147282036 -19368260 - PB1D10 SINE Alu -1 116 1 4 1708 354 228 0 14 chrX 147282068 147282151 -19368145 + MER33 DNA MER1_type 6 87 -2537 4 1708 422 266 164 22 chrX 147285443 147285635 -19364661 - MIR SINE MIR -11 257 35 4 1708 183 304 25 42 chrX 147285769 147285889 -19364407 + L2 LINE L2 2565 2682 -737 4 1708 222 37 0 0 chrX 147286346 147286373 -19363923 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 4 1708 267 276 60 20 chrX 147286507 147286607 -19363689 + PB1D7 SINE Alu 4 107 -13 4 1708 436 313 43 11 chrX 147286847 147287031 -19363265 + Lx7 LINE L1 7226 7415 -281 4 1708 24 0 0 0 chrX 147287161 147287185 -19363111 + AT_rich Low_complexity Low_complexity 1 24 0 4 1708 236 191 14 42 chrX 147287215 147287286 -19363010 - MLT1A1 LTR MaLR -18 390 322 4 1708 419 236 37 9 chrX 147287554 147287661 -19362635 + PB1D10 SINE Alu 2 111 -6 4 1708 239 227 15 0 chrX 147287944 147288010 -19362286 + CT-rich Low_complexity Low_complexity 5 71 0 4 1708 309 183 62 23 chrX 147288429 147288558 -19361738 + (TA)n Simple_repeat Simple_repeat 1 134 0 4 1708 658 178 44 0 chrX 147288607 147288742 -19361554 + B3 SINE B2 76 216 0 4 1708 819 181 0 7 chrX 147288771 147288910 -19361386 + B1_Mur2 SINE Alu 3 140 -9 4 1708 210 71 0 0 chrX 147288910 147288938 -19361358 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 4 1708 709 291 9 18 chrX 147290109 147290326 -19359970 - B3 SINE B2 0 216 2 4 1708 657 173 61 91 chrX 147290478 147290675 -19359621 + Lx5 LINE L1 6857 7047 -3 4 1708 329 215 43 114 chrX 147291724 147291908 -19358388 - Lx8 LINE L1 0 7473 7303 4 1708 470 365 88 30 chrX 147291939 147292270 -19358026 + L2b LINE L2 3026 3375 0 4 1708 488 315 0 0 chrX 147292398 147292541 -19357755 + B1F SINE Alu 1 143 -6 4 1708 2451 202 50 29 chrX 147295213 147295758 -19354538 + L1_Mur3 LINE L1 303 858 -6870 4 1708 195 42 0 0 chrX 147295765 147295789 -19354507 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1708 37686 30 12 0 chrX 147296172 147302412 -19347884 - L1Md_T LINE L1 0 6585 168 4 1708 3893 147 168 48 chrX 147302408 147303781 -19346515 + L1_Mur3 LINE L1 870 2406 -3474 4 1708 4013 192 21 92 chrX 147303781 147304390 -19345906 - Lx6 LINE L1 -28 7432 6879 4 1708 261 0 0 0 chrX 147304390 147304419 -19345877 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1708 4013 192 21 92 chrX 147304419 147304679 -19345617 - Lx6 LINE L1 -582 6878 6625 4 1708 3356 127 44 3 chrX 147304678 147305245 -19345051 + L1_Mur3 LINE L1 2404 2993 -2887 4 1708 2098 144 32 0 chrX 147305245 147305585 -19344711 + Lx4A LINE L1 6705 7055 -3 4 1708 2459 47 0 0 chrX 147306228 147306524 -19343772 + L1Md_F2 LINE L1 6275 6570 -12 4 1708 2509 246 110 12 chrX 147306532 147307260 -19343036 + RMER1C Other Other 543 1341 -1 4 1708 343 341 44 38 chrX 147308375 147308558 -19341738 - MLT1L LTR MaLR -9 601 418 4 1708 255 250 0 0 chrX 147309176 147309240 -19341056 - RMER1C Other Other -5 1337 1274 4 1708 1846 274 38 24 chrX 147309340 147309837 -19340459 - Lx9 LINE L1 -453 7191 6688 4 1708 543 128 0 0 chrX 147310314 147310423 -19339873 + (TC)n Simple_repeat Simple_repeat 1 109 0 4 1708 318 224 144 17 chrX 147310423 147310541 -19339755 - Lx8 LINE L1 0 7473 7341 4 1708 1178 240 51 14 chrX 147311070 147311345 -19338951 - Lx5 LINE L1 -2 7048 6764 4 1708 3063 33 49 0 chrX 147311342 147311707 -19338589 - L1Md_F3 LINE L1 -203 6381 5999 4 1708 1469 42 0 46 chrX 147311707 147311904 -19338392 + L1Md_F3 LINE L1 6397 6584 0 4 1708 3328 195 35 22 chrX 147311912 147312547 -19337749 - Lx5 LINE L1 -283 6767 6125 4 1708 676 214 8 0 chrX 147313239 147313370 -19336926 + B1_Mus2 SINE Alu 1 132 -15 4 1708 422 232 181 14 chrX 147313405 147313549 -19336747 - B3A SINE B2 -27 171 4 4 1708 715 270 58 10 chrX 147313591 147313797 -19336499 + ID_B1 SINE B4 2 217 -7 4 1708 3812 200 56 29 chrX 147313819 147314659 -19335637 + Lx7 LINE L1 6681 7543 -153 4 1708 5663 211 71 72 chrX 147314642 147315905 -19334391 - Lx4A LINE L1 -4 7054 5798 4 1708 1179 48 7 0 chrX 147315905 147316050 -19334246 - B1_Mm SINE Alu 0 147 2 4 1708 5663 142 20 121 chrX 147316050 147316533 -19333763 - Lx4A LINE L1 -1261 5797 5296 4 1708 21 82 0 0 chrX 147316533 147316582 -19333714 + AT_rich Low_complexity Low_complexity 1 49 0 4 1708 7975 74 0 9 chrX 147316641 147318021 -19332275 - L1_Mus1 LINE L1 -2 6565 5201 4 1708 1209 41 14 0 chrX 147318021 147318166 -19332130 + B1_Mus1 SINE Alu 2 148 0 4 1708 6373 107 0 29 chrX 147318166 147318403 -19331893 - L1_Mus1 LINE L1 -683 5200 4976 4 1708 4951 107 25 21 chrX 147318566 147319342 -19330954 - Lx4A LINE L1 -571 5306 4528 4 1708 552 239 7 14 chrX 147319326 147319466 -19330830 + Lx7 LINE L1 7542 7680 -16 4 1708 201 366 123 20 chrX 147319490 147319685 -19330611 - L2a LINE L2 -195 3231 3017 4 1708 202 29 57 0 chrX 147320040 147320075 -19330221 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 4 1708 252 125 21 0 chrX 147320373 147320421 -19329875 + Lx7 LINE L1 7640 7688 -8 4 1708 1161 52 0 0 chrX 147320435 147320571 -19329725 + B1_Mm SINE Alu 2 137 -10 4 1708 197 0 0 67 chrX 147320571 147320601 -19329695 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1708 536 256 8 8 chrX 147321193 147321323 -19328973 - ID_B1 SINE B4 -6 218 89 4 1708 567 29 0 0 chrX 147322779 147322848 -19327448 + (TC)n Simple_repeat Simple_repeat 1 69 0 4 1708 369 75 0 0 chrX 147322848 147322900 -19327396 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1708 620 241 37 19 chrX 147323112 147323273 -19327023 + MER5A1 DNA MER1_type 2 165 -1 4 1708 3409 54 0 0 chrX 147324230 147324636 -19325660 - L1Md_F3 LINE L1 -131 6451 6046 4 1708 796 34 66 16 chrX 147324637 147324758 -19325538 + L1Md_F3 LINE L1 6455 6581 -3 4 1709 1126 52 6 13 chrX 147325098 147325255 -19325041 + B2_Mm1a SINE B2 1 156 -37 4 1709 405 39 0 0 chrX 147325255 147325306 -19324990 + (TAAA)n Simple_repeat Simple_repeat 4 54 0 4 1709 1958 133 7 10 chrX 147325334 147325637 -19324659 + Lx4A LINE L1 6757 7058 0 4 1709 798 236 85 0 chrX 147325662 147325861 -19324435 + B3 SINE B2 1 216 0 4 1709 904 245 12 31 chrX 147326087 147326406 -19323890 + L1MA4 LINE L1 5708 6011 -286 4 1709 450 0 0 0 chrX 147326985 147327035 -19323261 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1709 8302 140 52 20 chrX 147327274 147329079 -19321217 + Lx5 LINE L1 5156 7047 -3 4 1709 811 236 114 16 chrX 147329543 147329703 -19320593 + ORR1D2 LTR MaLR 3 168 -202 4 1709 585 0 0 0 chrX 147329703 147329768 -19320528 + (TC)n Simple_repeat Simple_repeat 1 65 0 4 1709 811 236 114 16 chrX 147329768 147329861 -19320435 + ORR1D2 LTR MaLR 169 280 -90 4 1709 2125 125 61 0 chrX 147329871 147330232 -19320064 - ORR1C2 LTR MaLR -1 383 1 4 1709 294 215 25 0 chrX 147330232 147330311 -19319985 + ORR1D2 LTR MaLR 286 366 -4 4 1709 454 0 49 0 chrX 147330695 147330756 -19319540 + (TTCC)n Simple_repeat Simple_repeat 2 65 0 4 1709 620 319 51 25 chrX 147331038 147331353 -19318943 - L1MA4A LINE L1 -382 5921 5599 4 1709 339 25 0 0 chrX 147331394 147331434 -19318862 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1709 798 252 25 25 chrX 147331478 147331677 -19318619 - B3 SINE B2 -17 199 1 4 1709 295 238 168 13 chrX 147331677 147331826 -19318470 - L1_Rod LINE L1 -298 5549 5378 4 1709 547 171 18 37 chrX 147331847 147331956 -19318340 - B1_Mur1 SINE Alu -1 148 42 4 1709 228 188 0 0 chrX 147331958 147332027 -19318269 + C-rich Low_complexity Low_complexity 3 71 0 4 1709 287 167 0 69 chrX 147332042 147332100 -19318196 - B1_Mus2 SINE Alu -93 54 1 4 1709 601 316 38 46 chrX 147332102 147332447 -19317849 - L1_Mur3 LINE L1 -475 5405 5064 4 1709 908 209 101 5 chrX 147332491 147332679 -19317617 - B3 SINE B2 -5 211 6 4 1709 302 315 105 26 chrX 147332695 147332809 -19317487 - RSINE1 SINE B4 -42 123 1 4 1709 1907 143 25 12 chrX 147332834 147333159 -19317137 - ORR1A4 LTR MaLR 0 329 1 4 1709 565 255 63 7 chrX 147333159 147333301 -19316995 - RSINE1 SINE B4 -11 154 5 4 1709 1870 259 99 30 chrX 147333329 147333957 -19316339 - L1_Mur3 LINE L1 -859 5021 4344 4 1709 1713 148 48 35 chrX 147333957 147334273 -19316023 - Lx5 LINE L1 -3 7047 6728 4 1709 1870 259 99 30 chrX 147334273 147334316 -19315980 - L1_Mur3 LINE L1 -1537 4343 4307 4 1709 1823 185 30 25 chrX 147334316 147334681 -19315615 - ORR1B2 LTR MaLR 0 367 1 4 1709 1870 259 99 30 chrX 147334681 147334955 -19315341 - L1_Mur3 LINE L1 -1574 4306 4009 4 1709 749 291 113 31 chrX 147335001 147335486 -19314810 - L1_Mur3 LINE L1 -3127 2753 2229 4 1709 219 186 0 23 chrX 147335486 147335518 -19314778 + polypyrimidine Low_complexity Low_complexity 13 44 0 4 1709 1208 28 7 0 chrX 147335518 147335663 -19314633 - B1_Mm SINE Alu -1 146 1 4 1709 219 186 0 23 chrX 147335663 147335674 -19314622 + polypyrimidine Low_complexity Low_complexity 2 12 0 4 1709 1009 132 0 0 chrX 147335674 147335825 -19314471 - B2_Mm2 SINE B2 -27 168 18 4 1709 281 228 0 0 chrX 147336085 147336142 -19314154 - L1_Rod LINE L1 -3944 1903 1847 4 1709 1535 256 142 22 chrX 147336140 147336920 -19313376 + L1M2 LINE L1 4410 5283 -860 4 1709 481 208 0 62 chrX 147336965 147337078 -19313218 + Lx6 LINE L1 7004 7109 -351 4 1709 1806 194 18 18 chrX 147337957 147338346 -19311950 + L1_Rod LINE L1 5273 5661 -186 4 1709 275 300 50 0 chrX 147338559 147338659 -19311637 - Charlie2b DNA MER1_type -16 2766 2662 4 1709 664 91 16 2 chrX 147338818 147338939 -19311357 - L1_Mus1 LINE L1 0 6582 6458 4 1709 270 0 0 0 chrX 147339038 147339068 -19311228 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1709 638 286 156 23 chrX 147339103 147339279 -19311017 - Charlie2b DNA MER1_type -519 2263 2048 4 1709 441 0 0 0 chrX 147339279 147339328 -19310968 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1709 638 286 156 23 chrX 147339328 147339581 -19310715 - Charlie2b DNA MER1_type -735 2047 1777 4 1709 425 262 152 99 chrX 147339573 147339855 -19310441 - Charlie2b DNA MER1_type -2452 330 34 4 1709 621 40 0 0 chrX 147339857 147339933 -19310363 + (CATA)n Simple_repeat Simple_repeat 2 77 0 4 1709 1000 104 0 7 chrX 147340229 147340364 -19309932 + B1_Mus2 SINE Alu 3 136 -11 4 1709 522 0 0 0 chrX 147340364 147340422 -19309874 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 4 1709 1000 59 0 0 chrX 147340640 147340775 -19309521 + L1_Mus2 LINE L1 6432 6566 0 4 1709 5829 39 0 0 chrX 147340798 147341495 -19308801 + L1Md_A LINE L1 5886 6582 0 4 1709 789 53 17 26 chrX 147341701 147341817 -19308479 + B1_Mus1 SINE Alu 34 148 0 4 1709 201 39 0 0 chrX 147341817 147341843 -19308453 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 5 1709 1255 109 118 5 chrX 147342406 147342609 -19307687 - URR1A DNA MER1_type 0 226 1 5 1709 1200 41 7 7 chrX 147342752 147342899 -19307397 + B1_Mus2 SINE Alu 1 147 0 5 1709 21 0 0 0 chrX 147343798 147343819 -19306477 + AT_rich Low_complexity Low_complexity 1 21 0 5 1709 899 163 0 0 chrX 147343822 147343957 -19306339 + B1_Mus1 SINE Alu 2 136 -12 5 1709 423 0 0 0 chrX 147343957 147344004 -19306292 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 5 1709 293 343 29 0 chrX 147344030 147344135 -19306161 + PB1D10 SINE Alu 1 108 -9 5 1709 728 278 73 0 chrX 147344136 147344341 -19305955 + ID_B1 SINE B4 1 220 -4 5 1709 270 160 0 0 chrX 147344351 147344401 -19305895 + GA-rich Low_complexity Low_complexity 2 51 0 5 1709 376 282 29 22 chrX 147345990 147346106 -19304190 - B1F SINE Alu -2 115 1 5 1709 309 355 0 7 chrX 147347702 147347841 -19302455 - MERVK26-int LTR ERVK -303 6616 6479 5 1709 187 315 13 52 chrX 147348272 147348349 -19301947 + L3 LINE CR1 8 81 -4408 5 1709 375 23 0 0 chrX 147349025 147349069 -19301227 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1709 405 0 0 0 chrX 147349069 147349113 -19301183 + (GA)n Simple_repeat Simple_repeat 1 45 0 5 1709 629 264 216 5 chrX 147349118 147349331 -19300965 - B4 SINE B4 -1 291 34 5 1709 3083 73 0 5 chrX 147349642 147350040 -19300256 + MTA_Mm LTR MaLR 1 396 0 5 1709 860 118 8 0 chrX 147350402 147350529 -19299767 + B2_Mm1t SINE B2 3 130 -63 5 1709 349 119 304 28 chrX 147350549 147350657 -19299639 + B2_Mm2 SINE B2 46 188 -7 5 1709 189 0 0 0 chrX 147351971 147351992 -19298304 + (TAA)n Simple_repeat Simple_repeat 1 21 0 5 1709 6946 53 6 1 chrX 147352160 147353033 -19297263 + L1_Mus3 LINE L1 5758 6634 -4 5 1709 893 213 104 0 chrX 147353053 147353236 -19297060 + B3 SINE B2 1 202 -14 5 1709 304 147 77 19 chrX 147354457 147354561 -19295735 + T-rich Low_complexity Low_complexity 3 112 0 5 1709 773 163 88 7 chrX 147354566 147354702 -19295594 - B1_Mur3 SINE Alu -2 147 1 5 1709 1446 70 0 0 chrX 147354730 147354916 -19295380 + B2_Mm1t SINE B2 2 187 -6 5 1709 7486 49 14 3 chrX 147354978 147356070 -19294226 - L1Md_F2 LINE L1 -12 6570 5467 5 1709 2562 269 95 22 chrX 147356081 147357125 -19293171 - Lx9 LINE L1 -25 7619 6500 5 1709 354 71 368 3 chrX 147357179 147357277 -19293019 + B2_Mm2 SINE B2 46 181 -14 5 1709 841 9 0 0 chrX 147357295 147357403 -19292893 + L1Md_A LINE L1 6475 6582 0 5 1709 23 0 0 0 chrX 147357419 147357442 -19292854 + AT_rich Low_complexity Low_complexity 1 23 0 5 1709 1115 188 73 138 chrX 147357628 147358033 -19292263 + MT2A LTR ERVL 1 510 -91 5 1709 3349 204 93 28 chrX 147358037 147359035 -19291261 - L1_Rod LINE L1 -167 5680 4618 5 1709 1669 226 36 19 chrX 147359751 147360162 -19290134 - MTD LTR MaLR 0 419 2 5 1709 186 224 163 12 chrX 147360384 147360470 -19289826 - L4 LINE RTE -812 1217 1119 5 1709 434 248 79 0 chrX 147360705 147360806 -19289490 + PB1D10 SINE Alu 4 112 -5 5 1709 326 227 30 20 chrX 147361301 147361316 -19288980 + ID_B1 SINE B4 124 223 -1 5 1709 345 226 36 0 chrX 147361316 147361400 -19288896 + B1F SINE Alu 62 148 -1 5 1709 8324 115 30 11 chrX 147361630 147363907 -19286389 + Lx2B LINE L1 4686 7000 0 5 1709 920 318 134 20 chrX 147364247 147364799 -19285497 + L1MCa LINE L1 305 919 -5589 5 1709 356 258 22 36 chrX 147364881 147365018 -19285278 + L1MA10 LINE L1 6185 6319 -15 5 1709 512 284 9 0 chrX 147365274 147365390 -19284906 - ID_B1 SINE B4 -20 204 88 5 1709 252 157 65 33 chrX 147365488 147365580 -19284716 - Lx9 LINE L1 0 7644 7550 5 1709 1763 243 67 26 chrX 147365599 147366090 -19284206 - Lx9 LINE L1 -156 7488 6978 5 1709 891 166 21 57 chrX 147366092 147366284 -19284012 + ORR1C2 LTR MaLR 1 185 -199 5 1709 453 116 0 0 chrX 147366284 147366353 -19283943 + (TC)n Simple_repeat Simple_repeat 2 70 0 5 1709 351 0 0 0 chrX 147366353 147366392 -19283904 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1709 2580 201 42 76 chrX 147366410 147367132 -19283164 + RMER6A LTR ERVK 57 753 -3 5 1709 1015 58 0 68 chrX 147367186 147367334 -19282962 + B1_Mus1 SINE Alu 11 148 0 5 1709 848 151 43 0 chrX 147367513 147367652 -19282644 + B1_Mur4 SINE Alu 6 150 0 5 1709 726 119 26 19 chrX 147367659 147367813 -19282483 + GA-rich Low_complexity Low_complexity 2 156 0 5 1709 652 270 226 28 chrX 147367887 147368568 -19281728 + L1MCa LINE L1 2827 3642 -2679 5 1709 963 49 0 8 chrX 147368765 147368889 -19281407 + B2_Mm2 SINE B2 2 124 -71 5 1709 477 0 0 0 chrX 147368918 147368971 -19281325 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1709 228 135 0 0 chrX 147368988 147369025 -19281271 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 1709 439 295 45 4 chrX 147369043 147369285 -19281011 + L1M5 LINE L1 3738 3989 -2157 5 1709 607 84 21 0 chrX 147370044 147370139 -19280157 + (GAAAA)n Simple_repeat Simple_repeat 2 98 0 5 1709 591 242 44 22 chrX 147371467 147371602 -19278694 + RSINE1 SINE B4 10 147 -18 5 1709 29 28 0 0 chrX 147371614 147371650 -19278646 + AT_rich Low_complexity Low_complexity 1 36 0 5 1709 284 95 0 0 chrX 147371781 147371823 -19278473 + Lx4A LINE L1 6689 6730 -328 5 1709 5007 154 69 20 chrX 147371863 147372877 -19277419 - MERVL_2A-int LTR ERVL -4467 1294 231 5 1709 476 200 157 0 chrX 147372909 147373049 -19277247 - MERVL_2A-int LTR ERVL -5599 162 1 5 1709 1985 184 44 97 chrX 147373072 147373476 -19276820 - MT2A LTR ERVL -100 433 37 5 1709 1221 61 0 0 chrX 147373476 147373623 -19276673 + B1_Mus2 SINE Alu 1 147 0 5 1709 1985 184 44 97 chrX 147373623 147373670 -19276626 - MT2A LTR ERVL -497 36 6 5 1709 198 0 0 0 chrX 147373916 147373938 -19276358 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 5 1709 1447 260 21 35 chrX 147373956 147374383 -19275913 + Lx8 LINE L1 6879 7299 -174 5 1709 12495 15 1 0 chrX 147374397 147375905 -19274391 - L1Md_T LINE L1 -552 5331 3823 5 1709 2084 31 0 0 chrX 147375892 147376147 -19274149 + L1Md_T LINE L1 5332 5586 -297 5 1709 8400 32 0 5 chrX 147376147 147377148 -19273148 + L1Md_T LINE L1 5587 6582 0 5 1709 2244 41 97 0 chrX 147377465 147377755 -19272541 + L1Md_F3 LINE L1 6253 6570 -14 5 1709 534 263 25 6 chrX 147377839 147377996 -19272300 + Charlie2b DNA MER1_type 1786 1945 -837 5 1709 1023 343 40 10 chrX 147378246 147378747 -19271549 + Lx8 LINE L1 6920 7435 -38 5 1709 615 209 98 23 chrX 147378760 147378892 -19271404 + B1_Mus2 SINE Alu 1 142 -5 5 1709 1075 8 15 0 chrX 147378892 147379024 -19271272 + (GGAA)n Simple_repeat Simple_repeat 3 136 0 5 1709 21 57 0 0 chrX 147379046 147379081 -19271215 + AT_rich Low_complexity Low_complexity 1 35 0 5 1709 307 284 27 9 chrX 147379116 147379226 -19271070 - L1M2 LINE L1 -369 5799 5688 5 1709 2344 141 46 15 chrX 147379923 147380318 -19269978 + MTB_Mm LTR MaLR 1 407 0 5 1709 225 213 0 0 chrX 147380321 147380368 -19269928 + L1MC4a LINE L1 5742 5788 -336 5 1709 295 169 14 14 chrX 147380504 147380576 -19269720 + CT-rich Low_complexity Low_complexity 1 72 0 5 1709 820 148 110 32 chrX 147380576 147380730 -19269566 - B2_Mm2 SINE B2 -28 167 2 5 1709 280 254 113 0 chrX 147380858 147380929 -19269367 - ID4_ SINE ID -3 80 2 5 1709 484 299 21 28 chrX 147381190 147381331 -19268965 + ID_B1 SINE B4 85 224 0 5 1709 914 127 13 0 chrX 147381345 147381502 -19268794 + (GGAA)n Simple_repeat Simple_repeat 3 161 0 5 1709 303 224 20 20 chrX 147381570 147381670 -19268626 + L1MC4a LINE L1 5790 5889 -1993 5 1709 357 301 54 102 chrX 147381732 147381965 -19268331 + RSINE1 SINE B4 71 292 0 5 1709 323 208 0 0 chrX 147381965 147382037 -19268259 + L1M4 LINE L1 5762 5833 -341 5 1709 939 269 143 25 chrX 147382241 147382918 -19267378 - L1M2 LINE L1 -712 5585 4828 5 1709 462 18 0 0 chrX 147382918 147382973 -19267323 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1709 939 278 167 21 chrX 147382973 147383068 -19267228 - L1M2 LINE L1 -1316 4827 4702 5 1709 432 158 0 0 chrX 147383072 147383148 -19267148 + CT-rich Low_complexity Low_complexity 1 76 0 5 1709 528 16 0 0 chrX 147383148 147383209 -19267087 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 1709 351 60 0 0 chrX 147383231 147383281 -19267015 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 5 1709 957 109 0 0 chrX 147383281 147383409 -19266887 - B1_Mur4 SINE Alu -12 138 11 5 1709 472 239 40 122 chrX 147383409 147383429 -19266867 - B4 SINE B4 -78 214 79 5 1709 1276 244 77 14 chrX 147383456 147384151 -19266145 + L1MA6 LINE L1 4758 5510 -793 5 1709 437 176 67 150 chrX 147384129 147384309 -19265987 - Lx7 LINE L1 -513 7183 7019 5 1709 244 96 13 76 chrX 147384374 147384453 -19265843 + T-rich Low_complexity Low_complexity 4 77 0 5 1709 246 233 16 72 chrX 147384490 147384615 -19265681 + Lx7 LINE L1 7565 7682 -14 5 1709 417 277 26 0 chrX 147384623 147384778 -19265518 + L1MA6 LINE L1 5476 5634 -657 5 1709 958 266 77 11 chrX 147384790 147385140 -19265156 + L1MA6 LINE L1 5698 6070 -230 5 1709 882 168 0 45 chrX 147385140 147385296 -19265000 + B1_Mur3 SINE Alu 1 149 0 5 1709 426 228 0 0 chrX 147385373 147385452 -19264844 + PB1D10 SINE Alu 21 99 -18 5 1709 633 49 0 0 chrX 147385455 147385536 -19264760 + (GAAA)n Simple_repeat Simple_repeat 2 82 0 5 1709 254 200 133 48 chrX 147385543 147385648 -19264648 + L1MC LINE L1 5163 5276 -870 5 1709 26 0 0 0 chrX 147385661 147385687 -19264609 + AT_rich Low_complexity Low_complexity 1 26 0 5 1709 478 255 127 7 chrX 147385777 147385919 -19264377 + RSINE1 SINE B4 3 161 -4 5 1709 471 185 0 0 chrX 147385925 147386017 -19264279 + (CA)n Simple_repeat Simple_repeat 1 92 0 5 1709 681 325 32 39 chrX 147386041 147386320 -19263976 + B4A SINE B4 1 277 -15 5 1709 456 19 0 0 chrX 147386375 147386428 -19263868 + (TAAA)n Simple_repeat Simple_repeat 1 53 0 5 1709 997 299 17 3 chrX 147386644 147386999 -19263297 + L1MD LINE L1 5404 5763 -2232 5 1709 479 350 77 52 chrX 147387570 147388202 -19262094 + L1M2 LINE L1 4590 5247 -896 5 1709 231 319 44 0 chrX 147388729 147388820 -19261476 - L2a LINE L2 -272 3154 3060 5 1709 269 254 14 15 chrX 147388985 147389062 -19261234 + MIRb SINE MIR 89 175 -93 6 1709 402 352 110 20 chrX 147389099 147389554 -19260742 - MLT1M LTR MaLR 0 672 177 6 1709 482 0 17 0 chrX 147389900 147389958 -19260338 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1709 378 258 48 24 chrX 147390086 147390253 -19260043 + L2 LINE L2 2385 2555 -864 6 1709 25 0 0 0 chrX 147391054 147391079 -19259217 + AT_rich Low_complexity Low_complexity 1 25 0 6 1709 208 222 22 0 chrX 147391851 147391896 -19258400 - MER5A DNA MER1_type -22 167 122 6 1709 751 259 216 118 chrX 147392079 147392232 -19258064 + L1MB4 LINE L1 21 187 -6420 6 1709 2454 126 54 32 chrX 147392232 147392642 -19257654 - MTC LTR MaLR 0 421 3 6 1709 751 259 216 118 chrX 147392642 147393532 -19256764 + L1MB4 LINE L1 188 1166 -5441 6 1709 1168 124 11 0 chrX 147393644 147393821 -19256475 + B2_Mm1t SINE B2 1 179 -14 6 1709 258 40 0 74 chrX 147393914 147393968 -19256328 + B2_Mm2 SINE B2 137 186 -9 6 1709 627 260 29 8 chrX 147394019 147394219 -19256077 + B3A SINE B2 10 216 0 6 1709 425 239 36 29 chrX 147394227 147394365 -19255931 + L1MB4 LINE L1 1229 1367 -5240 6 1709 434 268 70 18 chrX 147394791 147395019 -19255277 + L1M2 LINE L1 3337 3576 -2567 6 1709 472 333 35 0 chrX 147395019 147395156 -19255140 + RSINE1 SINE B4 3 144 -21 6 1709 405 0 0 0 chrX 147395156 147395201 -19255095 + (GA)n Simple_repeat Simple_repeat 1 45 0 6 1709 1551 315 58 20 chrX 147395218 147395818 -19254478 + Lx8 LINE L1 6845 7467 -6 6 1709 459 0 0 0 chrX 147395828 147395879 -19254417 + (TA)n Simple_repeat Simple_repeat 1 51 0 6 1709 315 0 0 0 chrX 147395879 147395913 -19254383 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1709 625 235 21 88 chrX 147396083 147396182 -19254114 + ID_B1 SINE B4 1 222 -2 6 1709 870 96 7 22 chrX 147396182 147396321 -19253975 + B1_Mus2 SINE Alu 9 145 -2 6 1709 333 307 52 26 chrX 147396315 147396469 -19253827 + B4A SINE B4 70 227 -65 6 1709 815 219 97 20 chrX 147396470 147396666 -19253630 + B3 SINE B2 1 211 -5 6 1709 473 266 83 14 chrX 147396692 147396909 -19253387 + L1M2 LINE L1 4404 4635 -1508 6 1709 453 74 0 14 chrX 147396915 147396984 -19253312 - Lx2A LINE L1 -11 6997 6930 6 1709 4798 91 17 14 chrX 147396984 147397679 -19252617 - Lx2A LINE L1 -32 6976 6280 6 1709 1292 111 0 6 chrX 147397703 147397885 -19252411 - B2_Mm2 SINE B2 -14 181 1 6 1709 247 148 348 18 chrX 147397895 147398007 -19252289 - B2_Mm2 SINE B2 0 195 47 6 1709 1170 107 65 0 chrX 147398054 147398222 -19252074 - B2_Mm1t SINE B2 -14 179 1 6 1709 742 200 15 15 chrX 147398246 147398383 -19251913 - B1_Mur1 SINE Alu -7 142 6 6 1709 338 264 0 94 chrX 147398286 147398403 -19251893 - MT2B LTR ERVL -344 257 152 6 1709 707 165 8 0 chrX 147398479 147398600 -19251696 - RLTR14 LTR ERV1 0 382 261 6 1709 678 259 25 25 chrX 147398598 147398800 -19251496 - MTE-int LTR MaLR -1340 240 39 6 1709 364 268 0 30 chrX 147398789 147398889 -19251407 - MTEa LTR MaLR -43 336 240 6 1709 30 45 0 0 chrX 147399082 147399126 -19251170 + AT_rich Low_complexity Low_complexity 1 44 0 6 1709 1122 141 112 32 chrX 147399532 147399781 -19250515 - RLTR11A LTR ERVK -4 524 256 6 1709 265 257 106 29 chrX 147400217 147400321 -19249975 + L2a LINE L2 3150 3261 -165 6 1709 447 290 154 0 chrX 147400323 147400485 -19249811 + MER2 DNA MER2_type 2 188 -157 6 1709 1295 70 11 28 chrX 147400502 147400679 -19249617 - B2_Mm1t SINE B2 -19 174 1 6 1709 26 0 0 0 chrX 147400697 147400723 -19249573 + AT_rich Low_complexity Low_complexity 1 26 0 6 1709 1131 75 0 13 chrX 147400725 147400874 -19249422 + B1_Mm SINE Alu 1 147 0 6 1709 1112 71 0 28 chrX 147400889 147401033 -19249263 + B1_Mus2 SINE Alu 2 141 -6 6 1709 337 107 12 35 chrX 147401072 147401136 -19249160 - B2_Mm2 SINE B2 -83 115 48 6 1709 795 98 346 0 chrX 147401186 147401319 -19248977 - B2_Mm1t SINE B2 -14 179 1 6 1709 308 236 14 0 chrX 147401389 147401461 -19248835 + PB1 SINE Alu 53 125 -2 6 1709 406 250 71 35 chrX 147401468 147401609 -19248687 + B1F1 SINE Alu 1 146 -3 6 1709 926 61 255 33 chrX 147401612 147401765 -19248531 + B2_Mm2 SINE B2 1 187 -8 6 1709 491 280 23 0 chrX 147402016 147402148 -19248148 + MER2 DNA MER2_type 211 345 0 6 1709 1641 42 0 0 chrX 147402352 147402543 -19247753 + B2_Mm1t SINE B2 1 191 -2 6 1709 473 91 13 0 chrX 147402573 147402650 -19247646 + B2_Mm1t SINE B2 112 189 -4 6 1709 21 71 0 0 chrX 147403455 147403497 -19246799 + AT_rich Low_complexity Low_complexity 1 42 0 6 1709 839 192 126 0 chrX 147403497 147403679 -19246617 - B3 SINE B2 -10 206 2 6 1709 394 305 0 8 chrX 147403706 147403838 -19246458 - RLTR18-int LTR ERVK -1086 4275 4145 6 1709 21 36 0 0 chrX 147404747 147404775 -19245521 + AT_rich Low_complexity Low_complexity 1 28 0 6 1709 364 321 75 31 chrX 147404942 147405196 -19245100 - SRV_MM-int LTR ERVK -4620 1547 1283 6 1709 441 36 0 0 chrX 147405449 147405504 -19244792 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1709 231 61 0 0 chrX 147406739 147406772 -19243524 + (TTGG)n Simple_repeat Simple_repeat 2 34 0 6 1709 730 78 2 2 chrX 147406772 147406889 -19243407 - B1_Mus1 SINE Alu -2 118 2 6 1709 551 300 0 0 chrX 147406935 147407075 -19243221 - ID_B1 SINE B4 -1 223 84 6 1709 383 243 73 18 chrX 147407145 147407254 -19243042 + B1F2 SINE Alu 1 115 -34 6 1709 494 165 35 44 chrX 147407669 147407783 -19242513 + RLTR42-int LTR ERVK 2867 2979 -2543 6 1709 1172 50 0 0 chrX 147407811 147407950 -19242346 + B1_Mus2 SINE Alu 1 139 -8 6 1709 261 216 121 105 chrX 147408095 147408219 -19242077 + RLTR42-int LTR ERVK 3974 4099 -1423 6 1709 291 289 43 29 chrX 147408278 147408417 -19241879 + RLTR42-int LTR ERVK 4097 4237 -1285 6 1709 520 234 36 109 chrX 147408752 147408789 -19241507 + RLTR42-int LTR ERVK 4257 4279 -1243 6 1709 1468 65 16 0 chrX 147408789 147408973 -19241323 - B2_Mm2 SINE B2 -7 188 2 6 1709 520 234 36 109 chrX 147408973 147409127 -19241169 + RLTR42-int LTR ERVK 4280 4434 -1088 6 1709 495 0 0 0 chrX 147409494 147409549 -19240747 + (TC)n Simple_repeat Simple_repeat 1 55 0 6 1709 315 0 0 0 chrX 147409549 147409583 -19240713 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 1709 232 333 0 0 chrX 147409704 147409779 -19240517 - ID4 SINE ID -7 76 2 6 1709 892 204 62 34 chrX 147409799 147410007 -19240289 - B3 SINE B2 0 216 3 6 1709 288 0 0 0 chrX 147410052 147410084 -19240212 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 1709 567 262 213 82 chrX 147410117 147410474 -19239822 + Lx9 LINE L1 7096 7513 -131 6 1709 315 122 0 0 chrX 147410474 147410523 -19239773 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1709 567 262 213 82 chrX 147410523 147410643 -19239653 + Lx9 LINE L1 7514 7635 -9 6 1709 993 152 0 0 chrX 147410865 147411010 -19239286 + B1_Mur3 SINE Alu 5 149 0 6 1709 288 200 62 0 chrX 147411655 147411720 -19238576 + L1MD3 LINE L1 7913 7981 -14 6 1709 328 119 85 0 chrX 147411752 147411811 -19238485 + B4 SINE B4 159 222 -70 6 1709 5954 28 3 0 chrX 147412278 147412960 -19237336 + L1Md_F2 LINE L1 5898 6581 -1 6 1709 666 287 94 47 chrX 147412983 147413345 -19236951 + L1M4 LINE L1 557 935 -5607 6 1709 448 146 23 68 chrX 147413349 147413437 -19236859 + B1_Mus1 SINE Alu 1 84 -64 6 1709 334 194 45 80 chrX 147413437 147413458 -19236838 + B4A SINE B4 86 190 -102 6 1709 250 305 20 31 chrX 147413458 147413556 -19236740 + Lx8 LINE L1 7085 7181 -292 6 1709 1223 61 0 0 chrX 147413556 147413703 -19236593 + B1_Mus2 SINE Alu 1 147 0 6 1709 27 0 0 0 chrX 147413703 147413730 -19236566 + AT_rich Low_complexity Low_complexity 1 27 0 6 1709 4133 35 0 2 chrX 147413730 147414214 -19236082 + L1Md_F2 LINE L1 6097 6579 -3 6 1709 335 267 115 111 chrX 147414215 147414485 -19235811 + Lx8 LINE L1 7173 7443 -30 6 1709 1052 179 41 0 chrX 147414485 147414681 -19235615 + B3 SINE B2 6 209 -7 6 1709 714 236 28 57 chrX 147414720 147414931 -19235365 + B3 SINE B2 12 216 0 6 1709 512 206 247 13 chrX 147415003 147415333 -19234963 + L1M2 LINE L1 4471 4912 -1231 6 1709 187 260 20 0 chrX 147415526 147415576 -19234720 + L2c LINE L2 3282 3332 -55 6 1709 542 227 0 9 chrX 147415745 147415856 -19234440 + PB1D10 SINE Alu 1 110 -7 6 1709 1147 273 179 14 chrX 147416092 147416801 -19233495 + L1_Mur3 LINE L1 4755 5580 -300 6 1709 581 253 94 6 chrX 147416802 147416961 -19233335 + B3A SINE B2 1 173 -25 6 1709 1076 66 13 0 chrX 147416982 147417134 -19233162 + B2_Mm2 SINE B2 1 154 -41 6 1709 528 16 0 0 chrX 147417136 147417197 -19233099 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 6 1709 486 0 0 0 chrX 147417211 147417265 -19233031 + (GGGA)n Simple_repeat Simple_repeat 3 56 0 6 1709 351 344 13 7 chrX 147417268 147417423 -19232873 + L1M2 LINE L1 5609 5764 -425 6 1709 518 204 18 44 chrX 147417438 147417551 -19232745 + B3 SINE B2 82 191 -25 6 1709 560 292 157 31 chrX 147417576 147418060 -19232236 + L1ME1 LINE L1 5572 6116 -63 6 1709 257 273 61 43 chrX 147418152 147418267 -19232029 + L1ME1 LINE L1 5956 6072 -107 6 1709 1095 43 65 0 chrX 147418297 147418435 -19231861 + B1_Mus2 SINE Alu 1 147 0 6 1709 277 320 0 37 chrX 147418558 147418665 -19231631 + PB1D10 SINE Alu 3 105 -12 6 1709 387 248 25 17 chrX 147418736 147418855 -19231441 - PB1D7 SINE Alu 0 120 1 6 1709 1226 54 0 0 chrX 147419030 147419178 -19231118 + B1_Mus1 SINE Alu 1 148 0 6 1709 28 0 0 0 chrX 147419178 147419206 -19231090 + AT_rich Low_complexity Low_complexity 1 28 0 6 1709 815 135 7 22 chrX 147419943 147420079 -19230217 - B1_Mur3 SINE Alu -2 147 14 6 1709 500 248 0 18 chrX 147420108 147420219 -19230077 - PB1D10 SINE Alu -3 114 6 6 1709 299 219 0 0 chrX 147420260 147420324 -19229972 + B1F1 SINE Alu 1 64 -85 6 1709 273 290 0 42 chrX 147420360 147420432 -19229864 + ID4_ SINE ID 15 83 0 6 1709 891 221 50 0 chrX 147421520 147421719 -19228577 - B3 SINE B2 -7 209 1 6 1709 282 157 0 19 chrX 147422190 147422242 -19228054 + MER5A DNA MER1_type 138 188 -1 7 1709 848 142 13 51 chrX 147422805 147422961 -19227335 - B1_Mur4 SINE Alu 0 150 1 7 1709 536 214 79 8 chrX 147422989 147423116 -19227180 + B1F SINE Alu 9 144 -5 7 1709 457 162 25 12 chrX 147424066 147424147 -19226149 + ID4_ SINE ID 1 82 -1 7 1709 836 157 0 41 chrX 147424155 147424301 -19225995 + B1_Mur3 SINE Alu 1 140 -9 7 1709 234 0 0 0 chrX 147424328 147424354 -19225942 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 1709 571 191 113 15 chrX 147424939 147425072 -19225224 + B1_Mur3 SINE Alu 3 148 -1 7 1709 504 204 34 34 chrX 147425177 147425294 -19225002 + PB1D10 SINE Alu 1 117 0 7 1709 538 178 0 61 chrX 147425976 147426090 -19224206 + PB1D10 SINE Alu 11 117 0 7 1709 185 196 0 121 chrX 147426921 147426979 -19223317 - MIR SINE MIR -10 252 202 7 1709 325 256 13 0 chrX 147426981 147427059 -19223237 - ID4 SINE ID -3 80 2 7 1709 239 380 19 0 chrX 147427077 147427185 -19223111 - MIRb SINE MIR -79 189 80 7 1709 547 207 9 9 chrX 147427303 147427415 -19222881 - PB1D9 SINE Alu -6 114 3 7 1709 396 333 79 0 chrX 147427501 147427615 -19222681 + B1F1 SINE Alu 1 123 -26 7 1709 242 191 21 21 chrX 147427615 147427663 -19222633 + ID4_ SINE ID 27 74 -9 7 1709 580 140 139 9 chrX 147427782 147427890 -19222406 + B1_Mur1 SINE Alu 21 142 -7 7 1709 1160 49 14 0 chrX 147429105 147429249 -19221047 + B1_Mm SINE Alu 2 147 0 7 1709 352 209 0 0 chrX 147430940 147431007 -19219289 - ID4_ SINE ID -13 70 4 7 1709 691 182 51 0 chrX 147432922 147433059 -19217237 + B1_Mur4 SINE Alu 7 150 0 7 1709 905 201 111 20 chrX 147433073 147433271 -19217025 - B3 SINE B2 0 216 1 7 1709 2178 64 76 20 chrX 147433336 147433490 -19216806 + L1_Mus1 LINE L1 6250 6403 -164 7 1709 3144 20 0 0 chrX 147433490 147433836 -19216460 + ORR1A0 LTR MaLR 1 346 0 7 1709 2178 64 76 20 chrX 147433836 147433982 -19216314 + L1_Mus1 LINE L1 6404 6567 0 7 1709 465 238 90 0 chrX 147435427 147435549 -19214747 + B1F SINE Alu 16 148 -1 7 1709 983 137 57 47 chrX 147435786 147435939 -19214357 + B2_Mm2 SINE B2 2 155 -40 7 1709 270 0 0 0 chrX 147435939 147435969 -19214327 + (CATA)n Simple_repeat Simple_repeat 2 31 0 7 1709 983 137 57 47 chrX 147435969 147436007 -19214289 + B2_Mm2 SINE B2 156 195 0 7 1709 361 302 52 0 chrX 147436067 147436163 -19214133 + RSINE1 SINE B4 4 104 -61 7 1709 260 333 8 26 chrX 147436506 147436623 -19213673 + CT-rich Low_complexity Low_complexity 5 119 0 7 1709 551 219 7 81 chrX 147436990 147437139 -19213157 + B1F1 SINE Alu 1 138 -11 7 1709 572 317 14 7 chrX 147437170 147437313 -19212983 + RSINE1 SINE B4 2 145 -20 7 1709 819 169 14 21 chrX 147437395 147437540 -19212756 + B1_Mur4 SINE Alu 2 145 -5 7 1709 395 291 8 97 chrX 147437682 147437806 -19212490 + PB1 SINE Alu 8 120 0 7 1709 307 250 0 59 chrX 147438482 147438567 -19211729 + ID4 SINE ID 1 80 -3 7 1709 912 241 92 48 chrX 147439083 147439375 -19210921 + MTEb LTR MaLR 18 322 -57 7 1709 832 146 152 0 chrX 147439657 147439821 -19210475 + MTC LTR MaLR 19 207 -214 7 1709 2093 40 0 0 chrX 147439823 147440071 -19210225 + L1Md_T LINE L1 6334 6581 -1 7 1709 502 257 9 22 chrX 147440828 147440986 -19209310 - L1M2 LINE L1 -693 5619 5463 7 1709 1214 43 0 0 chrX 147441321 147441462 -19208834 + B1_Mus2 SINE Alu 1 141 -6 7 1709 306 0 0 0 chrX 147441465 147441499 -19208797 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 7 1709 538 186 0 0 chrX 147442081 147442178 -19208118 - B1F SINE Alu -51 98 2 7 1709 972 61 91 0 chrX 147442257 147442389 -19207907 + B1_Mus1 SINE Alu 5 148 0 7 1709 511 219 26 26 chrX 147442747 147442864 -19207432 - PB1 SINE Alu -2 125 9 7 1709 1194 68 0 0 chrX 147443363 147443511 -19206785 + B1_Mus1 SINE Alu 1 148 0 7 1709 308 311 18 6 chrX 147443743 147443908 -19206388 + (CCCTAA)n Simple_repeat Simple_repeat 6 172 0 7 1709 227 156 31 0 chrX 147444066 147444130 -19206166 + (CCCTAA)n Simple_repeat Simple_repeat 3 68 0 7 1709 393 310 0 0 chrX 147444484 147444600 -19205696 - PB1D7 SINE Alu -4 116 1 7 1709 904 279 54 29 chrX 147444694 147444974 -19205322 - B4A SINE B4 -3 289 3 7 1709 394 293 35 0 chrX 147444982 147445098 -19205198 - PB1D7 SINE Alu 0 120 1 7 1709 296 237 25 38 chrX 147445170 147445249 -19205047 + ID4 SINE ID 5 82 -1 7 1709 1665 11 0 11 chrX 147445278 147445465 -19204831 + B2_Mm1a SINE B2 2 186 -7 7 1709 570 174 90 8 chrX 147445495 147445628 -19204668 + B1F SINE Alu 6 149 0 7 1709 453 338 45 0 chrX 147445807 147445940 -19204356 - B1F SINE Alu -8 141 3 7 1709 276 161 0 0 chrX 147445955 147446017 -19204279 + (TA)n Simple_repeat Simple_repeat 1 62 0 7 1709 917 163 7 0 chrX 147446017 147446164 -19204132 - B1_Mur3 SINE Alu -1 148 1 7 1709 617 299 110 55 chrX 147446192 147446263 -19204033 + MER2 DNA MER2_type 2 63 -282 7 1709 619 268 65 13 chrX 147446263 147446418 -19203878 + RSINE1 SINE B4 3 165 0 7 1709 617 299 110 55 chrX 147446418 147446672 -19203624 + MER2 DNA MER2_type 64 345 0 7 1709 674 247 12 48 chrX 147446856 147447022 -19203274 + RSINE1 SINE B4 6 165 0 7 1709 568 225 0 8 chrX 147447082 147447203 -19203093 + ID_B1 SINE B4 102 221 -3 7 1709 274 272 0 73 chrX 147447213 147447336 -19202960 + PB1D10 SINE Alu 4 117 0 7 1709 227 292 75 69 chrX 147447343 147447489 -19202807 - MIRb SINE MIR -79 189 33 7 1709 3237 37 0 0 chrX 147447536 147447919 -19202377 - L1Md_T LINE L1 0 6582 6200 7 1709 215 306 0 40 chrX 147447972 147448047 -19202249 + MIRc SINE MIR 79 150 -118 7 1709 273 281 91 58 chrX 147448149 147448270 -19202026 + PB1 SINE Alu 1 125 -2 7 1709 362 230 30 90 chrX 147448242 147448276 -19202020 + MT2B LTR ERVL 131 156 -445 7 1709 717 165 22 8 chrX 147448276 147448410 -19201886 + B1F2 SINE Alu 1 136 -13 7 1709 250 200 18 0 chrX 147448413 147448468 -19201828 + ID_B1 SINE B4 135 190 -34 7 1709 252 86 0 0 chrX 147449588 147449623 -19200673 + (T)n Simple_repeat Simple_repeat 1 35 0 7 1709 1203 48 0 13 chrX 147449623 147449772 -19200524 - B1_Mus2 SINE Alu 0 147 1 7 1709 642 199 7 54 chrX 147449893 147450042 -19200254 + B1_Mus1 SINE Alu 6 147 -1 7 1709 2995 48 24 3 chrX 147450051 147450429 -19199867 + L1Md_F3 LINE L1 6199 6584 0 7 1709 933 170 34 92 chrX 147450446 147450653 -19199643 + B2_Mm2 SINE B2 1 195 0 7 1709 326 74 19 0 chrX 147452013 147452067 -19198229 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1709 712 286 5 14 chrX 147452933 147453146 -19197150 - B3 SINE B2 -5 211 1 7 1709 243 271 115 23 chrX 147453359 147453446 -19196850 + ID_B1 SINE B4 78 172 -52 7 1709 744 267 9 28 chrX 147453475 147453691 -19196605 - ID_B1 SINE B4 -8 216 5 7 1709 194 272 217 0 chrX 147453859 147453951 -19196345 + MER5A DNA MER1_type 2 113 -76 7 1709 1503 287 29 29 chrX 147453956 147454014 -19196282 + Lx9 LINE L1 6204 6252 -1392 7 1709 240 86 0 0 chrX 147454014 147454049 -19196247 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1709 1503 287 29 29 chrX 147454049 147454510 -19195786 + Lx9 LINE L1 6253 6723 -921 7 1709 849 240 59 0 chrX 147454510 147454714 -19195582 - B3 SINE B2 0 216 1 7 1709 288 254 0 0 chrX 147454806 147454869 -19195427 + B1F SINE Alu 78 140 -9 7 1709 1333 102 0 26 chrX 147454887 147455079 -19195217 + B2_Mm2 SINE B2 1 187 -8 7 1709 349 277 0 0 chrX 147455103 147455186 -19195110 + ID4 SINE ID 1 83 0 7 1709 474 210 0 0 chrX 147455222 147455303 -19194993 + ID4_ SINE ID 2 82 -1 7 1709 631 268 0 7 chrX 147455556 147455695 -19194601 - ID_B1 SINE B4 -3 221 84 7 1710 385 153 162 67 chrX 147456034 147456139 -19194157 - B1_Mur3 SINE Alu 0 120 6 7 1710 802 108 8 8 chrX 147456538 147456659 -19193637 + B2_Mm2 SINE B2 2 122 -73 7 1710 775 58 0 0 chrX 147456660 147456764 -19193532 + B1_Mus1 SINE Alu 40 143 -5 7 1710 233 301 14 50 chrX 147456821 147456961 -19193335 + L1M2 LINE L1 5578 5712 -588 7 1710 462 191 10 21 chrX 147457120 147457216 -19193080 + B1F1 SINE Alu 53 147 -2 7 1710 1158 42 28 0 chrX 147457276 147457419 -19192877 - B1_Mus2 SINE Alu 0 147 1 7 1710 1600 158 53 10 chrX 147457422 147457723 -19192573 - Lx9 LINE L1 -107 7537 7224 7 1710 23 0 0 0 chrX 147457724 147457747 -19192549 + AT_rich Low_complexity Low_complexity 1 23 0 7 1710 378 296 31 0 chrX 147457755 147457853 -19192443 - PB1 SINE Alu -26 101 1 7 1710 492 211 6 109 chrX 147457928 147457960 -19192336 + MT2B LTR ERVL 139 215 -386 7 1710 827 38 0 0 chrX 147457960 147458066 -19192230 + B1_Mm SINE Alu 4 109 -38 7 1710 492 211 6 109 chrX 147458066 147458093 -19192203 + MT2B LTR ERVL 216 286 -315 7 1710 636 197 0 32 chrX 147458068 147458194 -19192102 + B1_Mus1 SINE Alu 6 127 -21 7 1710 970 202 91 5 chrX 147458327 147458526 -19191770 + B3 SINE B2 1 216 0 7 1710 413 235 35 0 chrX 147458540 147458625 -19191671 + B1_Mur4 SINE Alu 3 90 -60 7 1710 971 25 82 0 chrX 147458731 147458853 -19191443 + B1_Mm SINE Alu 5 136 -11 7 1710 204 0 83 0 chrX 147458853 147458889 -19191407 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 7 1710 562 171 122 0 chrX 147459415 147459538 -19190758 - B1_Mm SINE Alu 0 147 10 7 1710 529 173 9 9 chrX 147459538 147459643 -19190653 + B1_Mus2 SINE Alu 43 147 0 8 1710 432 0 0 0 chrX 147459775 147459823 -19190473 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 1710 1241 41 0 0 chrX 147459871 147460017 -19190279 + B1_Mus1 SINE Alu 2 147 -1 8 1710 25 51 0 0 chrX 147460297 147460336 -19189960 + AT_rich Low_complexity Low_complexity 1 39 0 8 1710 656 184 131 74 chrX 147460366 147460542 -19189754 - B3 SINE B2 -9 186 1 8 1710 311 302 0 0 chrX 147460564 147460650 -19189646 - PB1D10 SINE Alu -6 111 26 8 1710 932 158 0 33 chrX 147460931 147461082 -19189214 + B1_Mur3 SINE Alu 2 147 -2 8 1710 221 0 35 0 chrX 147461086 147461115 -19189181 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 8 1710 298 358 24 0 chrX 147461447 147461570 -19188726 + B1F1 SINE Alu 5 130 -19 8 1710 976 143 0 0 chrX 147461680 147461827 -19188469 + B1_Mus1 SINE Alu 2 148 0 8 1710 525 197 155 16 chrX 147462349 147462478 -19187818 + B1_Mus1 SINE Alu 1 147 -1 8 1710 568 207 14 7 chrX 147462480 147462626 -19187670 + GA-rich Low_complexity Low_complexity 3 149 0 8 1710 357 318 17 43 chrX 147462674 147462789 -19187507 - RMER15-int LTR ERVL -1110 3889 3778 8 1710 729 293 35 58 chrX 147462845 147463106 -19187190 - ORR1E LTR MaLR -104 255 1 8 1710 668 351 34 0 chrX 147463106 147463345 -19186951 - RMER15-int LTR ERVL -1732 3267 3021 8 1710 2258 152 15 5 chrX 147463350 147463741 -19186555 - MTC LTR MaLR -8 413 19 8 1710 642 286 23 23 chrX 147463756 147463971 -19186325 - RMER15-int LTR ERVL -1977 3022 2808 8 1710 519 205 8 33 chrX 147463974 147464095 -19186201 - B1_Mur1 SINE Alu 0 149 32 8 1710 1112 77 6 0 chrX 147464270 147464426 -19185870 + (GGA)n Simple_repeat Simple_repeat 2 158 0 8 1710 1664 32 0 0 chrX 147464426 147464616 -19185680 + B2_Mm1a SINE B2 3 192 -1 8 1710 401 129 14 0 chrX 147464616 147464686 -19185610 + (GGA)n Simple_repeat Simple_repeat 2 72 0 8 1710 722 224 196 0 chrX 147464783 147464962 -19185334 - ID_B1 SINE B4 -6 218 5 8 1710 196 30 29 29 chrX 147465037 147465071 -19185225 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 8 1710 875 148 0 0 chrX 147465071 147465213 -19185083 - B1_Mus1 SINE Alu -6 142 1 8 1710 924 170 0 0 chrX 147466475 147466622 -19183674 + B1_Mus2 SINE Alu 1 147 0 8 1710 300 111 0 0 chrX 147466622 147466667 -19183629 + (GGA)n Simple_repeat Simple_repeat 3 47 0 8 1710 1020 141 0 0 chrX 147466667 147466844 -19183452 + (GAA)n Simple_repeat Simple_repeat 3 179 0 8 1710 431 232 50 20 chrX 147466859 147466960 -19183336 + PB1D10 SINE Alu 14 117 0 8 1710 444 299 68 0 chrX 147466960 147467077 -19183219 + B1F SINE Alu 1 125 -24 8 1710 593 206 257 6 chrX 147467096 147467267 -19183029 + B3 SINE B2 3 216 0 8 1710 754 194 20 27 chrX 147467277 147467425 -19182871 + B1_Mur4 SINE Alu 3 149 -1 8 1710 194 83 0 53 chrX 147467425 147467463 -19182833 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 8 1710 269 321 60 22 chrX 147467548 147467682 -19182614 - MIR SINE MIR -16 246 108 8 1710 779 206 6 48 chrX 147468173 147468317 -19181979 + B3 SINE B2 52 192 -24 8 1710 1656 21 0 11 chrX 147468317 147468505 -19181791 + B2_Mm1a SINE B2 1 186 -7 8 1710 779 206 6 48 chrX 147468505 147468528 -19181768 + B3 SINE B2 193 212 -4 8 1710 405 67 80 0 chrX 147468528 147468603 -19181693 + (GGGAGA)n Simple_repeat Simple_repeat 5 85 0 8 1710 724 128 48 35 chrX 147468603 147468748 -19181548 + B2_Mm2 SINE B2 35 181 -14 8 1710 1426 63 0 0 chrX 147469039 147469213 -19181083 + B2_Mm1t SINE B2 1 174 -19 8 1710 397 174 113 75 chrX 147469266 147469372 -19180924 + PB1D10 SINE Alu 1 110 -7 8 1710 1229 48 0 0 chrX 147469493 147469640 -19180656 - B1_Mus2 SINE Alu 0 147 1 8 1710 796 170 29 7 chrX 147469685 147469821 -19180475 + B1_Mm SINE Alu 2 140 -7 8 1710 207 0 0 0 chrX 147469826 147469849 -19180447 + (TAAG)n Simple_repeat Simple_repeat 1 23 0 8 1710 28 29 0 0 chrX 147469849 147469884 -19180412 + AT_rich Low_complexity Low_complexity 1 35 0 8 1710 474 301 21 7 chrX 147469897 147470041 -19180255 + RSINE1 SINE B4 2 147 -18 8 1710 252 0 0 0 chrX 147470041 147470069 -19180227 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 1710 243 0 0 0 chrX 147470069 147470095 -19180201 + (GA)n Simple_repeat Simple_repeat 2 28 0 8 1710 180 0 114 0 chrX 147470273 147470308 -19179988 + (CAAAC)n Simple_repeat Simple_repeat 2 40 0 8 1710 1103 66 7 0 chrX 147470416 147470553 -19179743 + B1_Mus1 SINE Alu 1 138 -10 8 1710 409 17 35 0 chrX 147470553 147470611 -19179685 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 8 1710 800 248 66 9 chrX 147471611 147471823 -19178473 - ID_B1 SINE B4 0 224 1 8 1710 232 116 125 42 chrX 147471828 147471900 -19178396 + L2 LINE L2 1741 1818 -1601 8 1710 540 205 0 100 chrX 147471902 147472032 -19178264 + PB1D9 SINE Alu 3 119 -1 8 1710 652 214 0 0 chrX 147472030 147472156 -19178140 + B1_Mus1 SINE Alu 1 126 -22 8 1710 495 48 0 0 chrX 147472178 147472240 -19178056 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 8 1710 232 288 100 0 chrX 147472248 147472328 -19177968 + PB1D7 SINE Alu 33 120 0 8 1710 786 207 0 21 chrX 147472532 147472675 -19177621 + B1_Mur1 SINE Alu 5 144 -5 8 1710 355 335 127 65 chrX 147472726 147473092 -19177204 - L1ME3B LINE L1 -55 6185 5780 8 1710 3105 32 37 0 chrX 147473092 147473466 -19176830 + L1Md_F2 LINE L1 6195 6582 0 8 1710 355 335 127 65 chrX 147473466 147473603 -19176693 - L1ME3B LINE L1 -461 5779 5651 8 1710 269 230 108 0 chrX 147473644 147473718 -19176578 - PB1 SINE Alu -42 85 4 8 1710 594 286 19 87 chrX 147473750 147473957 -19176339 - B3A SINE B2 -5 193 1 8 1710 1128 217 33 91 chrX 147473961 147474143 -19176153 - Charlie1b DNA MER1_type -34 489 314 8 1710 460 242 92 23 chrX 147474143 147474274 -19176022 - B1F SINE Alu -8 141 2 8 1710 1128 217 33 91 chrX 147474274 147474459 -19175837 - Charlie1b DNA MER1_type -210 313 142 8 1710 1612 31 5 16 chrX 147474459 147474653 -19175643 - B2_Mm1t SINE B2 -1 192 1 8 1710 1128 217 33 91 chrX 147474653 147474714 -19175582 - Charlie1b DNA MER1_type -382 141 85 8 1710 355 259 97 9 chrX 147474776 147474889 -19175407 - L1ME3B LINE L1 -588 5652 5530 8 1710 236 274 0 0 chrX 147474936 147475009 -19175287 + L2 LINE L2 1995 2067 -1352 8 1710 252 0 0 0 chrX 147475132 147475160 -19175136 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 8 1710 1189 56 0 0 chrX 147475162 147475305 -19174991 - B1_Mus1 SINE Alu -5 143 1 8 1710 842 156 14 28 chrX 147475313 147475458 -19174838 - B1_Mur4 SINE Alu -7 143 1 8 1710 473 265 60 70 chrX 147475593 147475691 -19174605 + L2 LINE L2 2301 2398 -1021 8 1710 2411 108 100 3 chrX 147475691 147476071 -19174225 - RLTR9B2 LTR ERVK -3 417 1 8 1710 473 265 60 70 chrX 147476071 147476125 -19174171 + L2 LINE L2 2399 2448 -971 8 1710 518 263 0 0 chrX 147476125 147476239 -19174057 - PB1D7 SINE Alu -6 114 1 8 1710 473 265 60 70 chrX 147476239 147476300 -19173996 + L2 LINE L2 2449 2513 -906 8 1710 198 103 0 0 chrX 147476307 147476336 -19173960 + (TAA)n Simple_repeat Simple_repeat 2 30 0 8 1710 731 215 7 7 chrX 147476339 147476484 -19173812 + B1_Mur1 SINE Alu 2 146 -3 8 1710 233 245 57 0 chrX 147476569 147476622 -19173674 - ID4_ SINE ID 0 83 28 8 1710 365 283 50 0 chrX 147476638 147476737 -19173559 - B1F SINE Alu -5 144 41 8 1710 436 288 26 46 chrX 147476844 147476997 -19173299 + RSINE1 SINE B4 14 163 -2 8 1710 26 0 0 0 chrX 147477018 147477044 -19173252 + AT_rich Low_complexity Low_complexity 1 26 0 8 1710 1230 55 0 0 chrX 147477047 147477193 -19173103 + B1_Mus1 SINE Alu 2 147 -1 8 1710 242 0 61 0 chrX 147477204 147477237 -19173059 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 8 1710 183 345 66 11 chrX 147477246 147477337 -19172959 + L2 LINE L2 2851 2946 -473 8 1710 1590 42 11 0 chrX 147477366 147477556 -19172740 - B2_Mm1a SINE B2 0 193 2 8 1710 1541 58 0 20 chrX 147477572 147477767 -19172529 - B2_Mm2 SINE B2 -4 191 1 8 1710 351 255 36 18 chrX 147477850 147477962 -19172334 + MER2 DNA MER2_type 148 261 -84 8 1710 865 193 0 0 chrX 147478059 147478204 -19172092 - B1_Mus2 SINE Alu -1 146 2 8 1710 1364 89 16 16 chrX 147478311 147478504 -19171792 - B2_Mm2 SINE B2 -1 194 2 8 1710 531 0 0 0 chrX 147478517 147478576 -19171720 + (TTTC)n Simple_repeat Simple_repeat 1 59 0 8 1710 1233 103 11 0 chrX 147478576 147478751 -19171545 - B2_Mm1t SINE B2 -16 177 1 8 1710 309 219 44 12 chrX 147479165 147479265 -19171031 + PB1D7 SINE Alu 16 118 -2 8 1710 506 254 27 0 chrX 147479570 147479680 -19170616 + PB1D9 SINE Alu 2 114 -6 8 1710 233 325 7 67 chrX 147480970 147481105 -19169191 - L2 LINE L2 -2122 1297 1171 8 1710 181 100 75 0 chrX 147481674 147481714 -19168582 + CT-rich Low_complexity Low_complexity 4 46 0 8 1710 183 129 0 0 chrX 147482015 147482046 -19168250 + (CTG)n Simple_repeat Simple_repeat 1 31 0 8 1710 458 312 81 17 chrX 147482838 147483073 -19167223 - MIRb SINE MIR -10 258 9 8 1710 333 0 0 0 chrX 147483856 147483893 -19166403 + (CATA)n Simple_repeat Simple_repeat 1 37 0 8 1710 643 303 81 10 chrX 147483905 147484289 -19166007 + L2a LINE L2 2993 3403 -23 8 1710 617 102 252 8 chrX 147484644 147484763 -19165533 - B1_Mus1 SINE Alu 0 148 1 8 1710 270 244 56 87 chrX 147484778 147484904 -19165392 + MIR SINE MIR 23 144 -64 8 1710 265 158 36 84 chrX 147485991 147486074 -19164222 + MT2B LTR ERVL 163 241 -360 8 1710 389 154 144 7 chrX 147486009 147486115 -19164181 + PB1D9 SINE Alu 12 125 -25 8 1710 189 326 97 11 chrX 147488246 147488339 -19161957 - L2b LINE L2 -20 3367 3267 8 1710 423 256 62 37 chrX 147488383 147488545 -19161751 - L2b LINE L2 -235 3140 2975 8 1710 243 0 0 0 chrX 147489376 147489403 -19160893 + (G)n Simple_repeat Simple_repeat 1 27 0 8 1710 270 239 70 0 chrX 147489593 147489664 -19160632 + MIR SINE MIR 115 190 -72 8 1710 585 234 50 0 chrX 147489901 147490042 -19160254 - B1F2 SINE Alu -1 148 1 8 1710 351 0 0 0 chrX 147490446 147490485 -19159811 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 1710 333 0 0 0 chrX 147490485 147490521 -19159775 + (GA)n Simple_repeat Simple_repeat 1 37 0 8 1710 210 279 0 32 chrX 147491166 147491229 -19159067 + CT-rich Low_complexity Low_complexity 5 65 0 9 1710 752 140 0 89 chrX 147491229 147491386 -19158910 - B1_Mur1 SINE Alu 0 149 7 9 1710 581 289 24 87 chrX 147491541 147491749 -19158547 + ID_B1 SINE B4 4 198 -26 9 1710 468 298 46 0 chrX 147491645 147491776 -19158520 + B1F SINE Alu 13 149 0 9 1710 410 245 37 9 chrX 147491818 147491925 -19158371 + ID_B1 SINE B4 115 224 0 9 1710 375 205 0 35 chrX 147492143 147492229 -19158067 + RSINE1 SINE B4 44 126 -39 9 1710 198 0 0 0 chrX 147492404 147492426 -19157870 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 9 1710 843 154 7 7 chrX 147492426 147492563 -19157733 - B1_Mur4 SINE Alu -11 139 3 9 1710 255 114 0 0 chrX 147492998 147493042 -19157254 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 9 1710 434 196 87 0 chrX 147493047 147493139 -19157157 + ID_B1 SINE B4 123 222 -2 9 1710 596 267 0 0 chrX 147493174 147493305 -19156991 + B1F SINE Alu 18 148 -1 9 1710 203 289 36 12 chrX 147493944 147494028 -19156268 - MIR SINE MIR -61 147 62 9 1710 1651 270 116 36 chrX 147494325 147494983 -19155313 - Lx8 LINE L1 0 7473 6764 9 1710 623 277 37 23 chrX 147494995 147495277 -19155019 - Lx8 LINE L1 -1403 6070 5781 9 1710 880 125 15 0 chrX 147495286 147495422 -19154874 - B1_Mur4 SINE Alu -6 144 7 9 1710 1522 234 52 21 chrX 147495432 147495961 -19154335 - Lx8 LINE L1 -89 5791 5424 9 1710 287 146 0 18 chrX 147496041 147496097 -19154199 + C-rich Low_complexity Low_complexity 1 55 0 9 1710 207 320 70 0 chrX 147497160 147497260 -19153036 + MIRc SINE MIR 70 176 -92 9 1710 232 261 0 0 chrX 147498566 147498631 -19151665 + T-rich Low_complexity Low_complexity 1 65 0 9 1710 852 131 64 21 chrX 147498631 147498771 -19151525 - B1_Mur4 SINE Alu 0 150 5 9 1710 444 215 9 42 chrX 147499078 147499196 -19151100 - PB1D10 SINE Alu -1 116 1 9 1710 4806 51 5 15 chrX 147499399 147500000 -19150296 - L1Md_F2 LINE L1 0 6582 5988 9 1710 415 64 3 16 chrX 147500000 147500070 -19150226 - L1Md_F2 LINE L1 -595 5987 5915 1 1710 246 269 30 0 chrX 147500128 147500195 -19150101 - ID4 SINE ID -14 69 1 2 1710 400 258 34 0 chrX 147500298 147500387 -19149909 + B1F SINE Alu 10 101 -48 3 1710 306 246 0 14 chrX 147501083 147501157 -19149139 + B1F SINE Alu 17 89 -60 4 1710 210 191 0 0 chrX 147501913 147501955 -19148341 + GA-rich Low_complexity Low_complexity 1 42 0 5 1710 329 279 13 0 chrX 147502773 147502852 -19147444 + ID4 SINE ID 2 81 -2 6 1710 207 357 85 31 chrX 147502883 147503013 -19147283 - MIR SINE MIR -123 139 3 7 1710 409 234 27 36 chrX 147503207 147503318 -19146978 + PB1 SINE Alu 1 110 -17 8 1710 318 271 97 16 chrX 147503795 147503919 -19146377 + L2a LINE L2 3293 3426 0 9 1710 373 243 0 0 chrX 147504429 147504503 -19145793 + ID4_ SINE ID 8 81 -2 1 1710 409 240 87 29 chrX 147504688 147504791 -19145505 + RSINE1 SINE B4 11 119 -46 1 1710 207 0 0 0 chrX 147504805 147504828 -19145468 + (CCA)n Simple_repeat Simple_repeat 1 23 0 1 1710 327 226 46 35 chrX 147504873 147504960 -19145336 + PB1D10 SINE Alu 19 106 -11 1 1710 925 129 21 0 chrX 147504971 147505111 -19145185 + B1_Mur4 SINE Alu 1 143 -7 1 1710 966 136 0 39 chrX 147505164 147505317 -19144979 + B1_Mus2 SINE Alu 1 147 0 1 1710 289 290 47 25 chrX 147505382 147505516 -19144780 - ID4 SINE ID -18 134 3 1 1710 439 250 0 9 chrX 147505516 147505629 -19144667 + MIR SINE MIR 125 236 -26 1 1710 1603 32 21 0 chrX 147505639 147505827 -19144469 + B2_Mm1t SINE B2 2 193 0 1 1710 530 209 0 19 chrX 147505859 147505966 -19144330 - PB1D9 SINE Alu -3 117 13 1 1710 294 329 115 77 chrX 147507902 147508346 -19141950 - L2a LINE L2 -46 3380 2920 2 1710 1138 75 0 7 chrX 147508650 147508798 -19141498 + B1_Mus1 SINE Alu 2 148 0 2 1710 462 217 40 32 chrX 147508800 147508924 -19141372 + B3A SINE B2 27 151 -47 2 1710 283 279 0 85 chrX 147509384 147509478 -19140818 + PB1 SINE Alu 21 106 -21 2 1710 287 259 0 0 chrX 147509500 147509558 -19140738 + tRNA-Ala-GCY_ tRNA tRNA 12 69 -6 2 1710 807 185 7 20 chrX 147509580 147509729 -19140567 + B1_Mm SINE Alu 1 147 0 2 1710 1370 94 16 5 chrX 147509731 147509924 -19140372 + B2_Mm2 SINE B2 1 195 0 2 1710 404 165 0 23 chrX 147509932 147509948 -19140348 + polypurine Low_complexity Low_complexity 3 17 0 2 1710 1203 75 0 0 chrX 147509948 147510095 -19140201 + B1_Mus1 SINE Alu 2 148 0 2 1710 404 165 0 23 chrX 147510095 147510165 -19140131 + GA-rich Low_complexity Low_complexity 18 87 0 2 1710 424 323 68 0 chrX 147510200 147510361 -19139935 + MIRb SINE MIR 89 260 -8 3 1710 212 0 36 0 chrX 147511156 147511184 -19139112 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 1710 733 174 7 7 chrX 147511184 147511323 -19138973 - B1_Mus2 SINE Alu 0 147 9 3 1710 324 216 17 113 chrX 147511227 147511342 -19138954 - MT2B LTR ERVL -343 258 155 3 1710 255 309 107 18 chrX 147511510 147511622 -19138674 - L2b LINE L2 -171 3204 3083 3 1710 221 313 15 0 chrX 147512523 147512590 -19137706 - ID4 SINE ID -10 73 6 3 1710 1045 243 19 0 chrX 147512670 147512880 -19137416 - ID_B1 SINE B4 -9 215 2 3 1710 1416 75 32 0 chrX 147512880 147513067 -19137229 - B2_Mm1a SINE B2 0 193 1 3 1710 182 62 31 0 chrX 147513162 147513194 -19137102 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 3 1710 753 143 15 29 chrX 147514113 147514126 -19136170 - B1_Mur4 SINE Alu -9 141 129 3 1710 186 43 0 0 chrX 147514126 147514149 -19136147 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1710 270 0 0 0 chrX 147514151 147514181 -19136115 + (GA)n Simple_repeat Simple_repeat 1 30 0 4 1710 754 133 0 0 chrX 147514181 147514301 -19135995 - B1_Mus1 SINE Alu -22 126 7 4 1710 243 0 0 0 chrX 147514779 147514806 -19135490 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1710 1077 101 0 0 chrX 147514806 147514944 -19135352 - B1_Mus1 SINE Alu -9 139 2 4 1710 896 148 42 0 chrX 147515511 147515653 -19134643 + B1_Mur4 SINE Alu 2 149 -1 4 1710 262 246 0 17 chrX 147515948 147516006 -19134290 - B1F SINE Alu -60 89 33 4 1710 293 324 77 65 chrX 147516034 147516189 -19134107 - B3A SINE B2 -2 196 40 4 1710 870 176 0 13 chrX 147516207 147516357 -19133939 - B1_Mur1 SINE Alu -1 148 1 4 1710 21 68 0 17 chrX 147516364 147516398 -19133898 + AT_rich Low_complexity Low_complexity 1 34 0 4 1710 698 239 100 11 chrX 147516398 147516588 -19133708 - B3 SINE B2 -9 207 1 5 1710 21 68 0 17 chrX 147516588 147516613 -19133683 + AT_rich Low_complexity Low_complexity 1 25 0 5 1710 407 278 0 18 chrX 147516615 147516725 -19133571 + PB1D7 SINE Alu 6 113 -7 5 1710 462 263 121 6 chrX 147516806 147516963 -19133333 - MER5B DNA MER1_type -3 175 1 5 1710 298 261 0 14 chrX 147517100 147517170 -19133126 - PB1 SINE Alu -33 94 26 5 1710 22 0 0 0 chrX 147517277 147517299 -19132997 + AT_rich Low_complexity Low_complexity 1 22 0 5 1710 390 315 18 0 chrX 147517328 147517439 -19132857 - B4A SINE B4 -171 121 9 5 1710 475 241 27 20 chrX 147517453 147517601 -19132695 - L1ME2z LINE L1 -11 6433 6285 5 1710 932 131 7 14 chrX 147517662 147517809 -19132487 - B1_Mus2 SINE Alu 0 147 2 5 1710 423 0 0 0 chrX 147517946 147517993 -19132303 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1710 605 241 46 77 chrX 147518018 147518279 -19132017 - L1MA4 LINE L1 -385 5915 5663 6 1710 348 24 0 0 chrX 147518286 147518327 -19131969 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1710 472 252 98 0 chrX 147518360 147518464 -19131832 + L1M2 LINE L1 4721 4828 -1315 6 1710 258 81 0 0 chrX 147518464 147518501 -19131795 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1710 472 252 98 0 chrX 147518501 147518519 -19131777 + L1M2 LINE L1 4829 4854 -1289 6 1710 356 253 84 0 chrX 147518534 147518629 -19131667 - PB1D10 SINE Alu -8 109 7 6 1710 464 250 0 20 chrX 147518629 147518727 -19131569 + L1M2 LINE L1 4838 4933 -1210 6 1710 250 284 102 31 chrX 147518730 147518828 -19131468 - B3 SINE B2 -9 207 103 6 1710 265 248 44 106 chrX 147518981 147519094 -19131202 - L1ME2z LINE L1 -245 6199 6094 5 1710 982 98 78 7 chrX 147519440 147519594 -19130702 + B2_Mm2 SINE B2 1 165 -30 6 1710 183 283 25 127 chrX 147519856 147520014 -19130282 + L2b LINE L2 3131 3272 -103 6 1710 207 265 0 0 chrX 147520311 147520360 -19129936 - MIRc SINE MIR -106 162 114 6 1710 208 272 110 0 chrX 147521675 147521775 -19128521 - MIR SINE MIR -74 194 78 6 1710 184 275 72 0 chrX 147522026 147522095 -19128201 - MIR SINE MIR -24 238 165 7 1710 21 0 0 0 chrX 147523622 147523643 -19126653 + AT_rich Low_complexity Low_complexity 1 21 0 7 1710 238 218 110 68 chrX 147523771 147523889 -19126407 + MIR3 SINE MIR 37 159 -49 7 1710 274 262 113 28 chrX 147525454 147525560 -19124736 + PB1D10 SINE Alu 1 115 -2 7 1710 781 188 27 14 chrX 147525561 147525707 -19124589 + B1_Mur2 SINE Alu 1 148 -1 7 1710 470 277 15 23 chrX 147525815 147525948 -19124348 + B1F1 SINE Alu 12 143 -6 7 1710 321 194 83 0 chrX 147526704 147526776 -19123520 - ID4 SINE ID -2 81 4 7 1710 1633 37 0 0 chrX 147526981 147527168 -19123128 + B2_Mm1a SINE B2 1 187 -6 7 1710 1518 63 21 0 chrX 147527400 147527589 -19122707 - B2_Mm1t SINE B2 0 193 1 7 1710 806 244 35 62 chrX 147527728 147527955 -19122341 - ID_B1 SINE B4 -2 222 2 7 1710 367 287 0 9 chrX 147528007 147528116 -19122180 + PB1D10 SINE Alu 1 108 -9 8 1710 342 0 0 0 chrX 147528316 147528354 -19121942 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 1710 804 159 7 20 chrX 147528491 147528639 -19121657 + B1_Mus1 SINE Alu 3 148 0 8 1710 1395 61 44 0 chrX 147528843 147529023 -19121273 + B2_Mm2 SINE B2 1 188 -7 8 1710 1198 55 0 0 chrX 147529221 147529367 -19120929 + B1_Mus2 SINE Alu 2 147 0 8 1710 877 221 48 10 chrX 147529462 147529668 -19120628 - B3 SINE B2 -1 215 2 8 1710 474 229 253 6 chrX 147529676 147529834 -19120462 - B3A SINE B2 -1 197 1 8 1710 228 323 15 0 chrX 147529881 147529946 -19120350 - B4A SINE B4 -143 149 84 8 1710 310 241 0 12 chrX 147530210 147530290 -19120006 - ID4 SINE ID -2 81 3 8 1710 285 269 90 25 chrX 147530315 147530437 -19119859 - RSINE1 SINE B4 -33 132 3 8 1710 567 230 13 39 chrX 147531337 147531491 -19118805 + RSINE1 SINE B4 16 165 0 9 1710 1226 77 26 42 chrX 147531511 147531701 -19118595 - B2_Mm2 SINE B2 -8 187 1 9 1710 869 285 116 12 chrX 147531702 147532117 -19118179 - RMER5 LTR ERV1 -44 490 33 9 1710 298 266 26 17 chrX 147532227 147532342 -19117954 + L1M4 LINE L1 2656 2771 -3375 9 1710 183 80 0 0 chrX 147532408 147532433 -19117863 + (A)n Simple_repeat Simple_repeat 1 25 0 9 1710 293 260 31 8 chrX 147532445 147532573 -19117723 + L1M4 LINE L1 2809 2939 -3207 9 1710 3043 206 127 25 chrX 147532923 147533628 -19116668 + Lx7 LINE L1 6745 7512 -184 9 1710 1144 75 7 0 chrX 147533628 147533775 -19116521 - B1_Mus1 SINE Alu 0 148 1 9 1710 3043 206 127 25 chrX 147533775 147533844 -19116452 + Lx7 LINE L1 7513 7598 -98 9 1710 485 153 0 0 chrX 147533850 147533922 -19116374 + tRNA-Ala-GCG tRNA tRNA 1 72 -3 9 1710 381 86 0 0 chrX 147533997 147534055 -19116241 + B1_Mm SINE Alu 89 146 -1 9 1710 524 296 6 76 chrX 147534134 147534306 -19115990 + RSINE1 SINE B4 6 165 0 9 1710 396 268 34 61 chrX 147534333 147534480 -19115816 + ID_B1 SINE B4 81 223 -1 1 1710 28 29 0 0 chrX 147534524 147534559 -19115737 + AT_rich Low_complexity Low_complexity 1 35 0 1 1710 660 154 107 8 chrX 147534571 147534702 -19115594 + B1_Mur2 SINE Alu 6 149 0 1 1710 956 230 54 5 chrX 147534702 147534907 -19115389 + B3 SINE B2 2 216 0 1 1710 285 247 67 11 chrX 147535033 147535123 -19115173 - L2 LINE L2 -1408 2011 1917 1 1710 700 241 0 0 chrX 147535186 147535327 -19114969 - ID_B1 SINE B4 -2 222 82 1 1710 279 346 0 0 chrX 147535448 147535526 -19114770 + ID_B1 SINE B4 77 154 -70 1 1710 1106 90 0 0 chrX 147535624 147535780 -19114516 + B2_Mm2 SINE B2 2 157 -38 1 1710 279 0 0 0 chrX 147535780 147535811 -19114485 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 1 1710 324 0 0 0 chrX 147535988 147536024 -19114272 + (TAG)n Simple_repeat Simple_repeat 3 38 0 1 1710 987 128 7 7 chrX 147536024 147536173 -19114123 - B1_Mur4 SINE Alu 0 150 2 1 1710 32 0 0 0 chrX 147536405 147536437 -19113859 + AT_rich Low_complexity Low_complexity 1 32 0 1 1710 341 22 22 0 chrX 147536440 147536486 -19113810 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 1710 454 234 53 0 chrX 147536520 147536614 -19113682 - B3A SINE B2 -99 99 1 1 1710 41 36 0 0 chrX 147536616 147536671 -19113625 + AT_rich Low_complexity Low_complexity 1 55 0 1 1710 423 134 0 12 chrX 147536683 147536766 -19113530 - L1Md_F2 LINE L1 0 6582 6501 1 1710 252 0 0 0 chrX 147536787 147536815 -19113481 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1 1710 1205 48 7 0 chrX 147536820 147536966 -19113330 - B1_Mus1 SINE Alu 0 148 2 1 1710 1405 73 11 0 chrX 147536966 147537143 -19113153 - B2_Mm2 SINE B2 -16 179 1 1 1710 333 296 115 20 chrX 147537144 147537292 -19113004 - RSINE1 SINE B4 -2 163 2 1 1710 780 294 42 94 chrX 147537317 147537446 -19112850 - L1_Rod LINE L1 -3842 2005 1881 1 1710 1470 65 5 0 chrX 147537446 147537630 -19112666 + B2_Mm1a SINE B2 2 186 -7 1 1710 780 294 42 94 chrX 147537630 147537934 -19112362 - L1_Rod LINE L1 -3967 1880 1597 1 1710 578 260 14 14 chrX 147537934 147538082 -19112214 - B1F SINE Alu -1 148 1 1 1710 780 294 42 94 chrX 147538082 147538127 -19112169 - L1_Rod LINE L1 -4251 1596 1551 1 1710 788 236 82 0 chrX 147538174 147538369 -19111927 - B3 SINE B2 -2 214 4 1 1710 237 277 173 6 chrX 147538377 147538533 -19111763 - L1_Rod LINE L1 -6338 1270 1089 1 1710 1047 98 87 49 chrX 147538535 147538718 -19111578 + B2_Mm2 SINE B2 1 190 -5 1 1710 1211 46 107 23 chrX 147539436 147539571 -19110725 + B2_Mm2 SINE B2 3 149 -46 1 1710 294 29 0 0 chrX 147539571 147539606 -19110690 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1 1710 1211 46 107 23 chrX 147539606 147539647 -19110649 + B2_Mm2 SINE B2 150 194 -1 1 1710 792 159 6 82 chrX 147539793 147539905 -19110391 + B1_Mus1 SINE Alu 2 112 -36 1 1710 2938 66 45 8 chrX 147539905 147540301 -19109995 - RLTR10A LTR ERVK 0 411 1 1 1710 792 159 6 82 chrX 147540301 147540346 -19109950 + B1_Mus1 SINE Alu 113 147 -1 1 1710 696 286 22 6 chrX 147541040 147541219 -19109077 - MTEa LTR MaLR -197 182 1 1 1710 2037 276 31 75 chrX 147541228 147541454 -19108842 - MTEa-int LTR MaLR -9 1571 1353 1 1710 712 318 54 68 chrX 147541454 147541748 -19108548 + B4 SINE B4 2 291 -1 1 1710 2037 282 60 75 chrX 147541748 147542287 -19108009 - MTEa-int LTR MaLR -228 1352 649 1 1710 361 147 42 10 chrX 147542294 147542390 -19107906 + CT-rich Low_complexity Low_complexity 4 102 0 1 1710 488 143 192 67 chrX 147542403 147542523 -19107773 - B1_Mus1 SINE Alu -7 141 7 1 1710 288 0 0 0 chrX 147542559 147542591 -19107705 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 1710 360 43 0 0 chrX 147542641 147542687 -19107609 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1710 575 302 0 14 chrX 147542690 147542831 -19107465 - B3A SINE B2 -33 165 27 1 1710 1705 102 68 0 chrX 147542915 147543179 -19107117 - Lx LINE L1 -6 6648 6367 1 1710 322 21 43 0 chrX 147543258 147543305 -19106991 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 1710 938 177 100 0 chrX 147543349 147543569 -19106727 - Lx9 LINE L1 -2 7642 7401 1 1710 1374 310 66 10 chrX 147543569 147544071 -19106225 - MTEa-int LTR MaLR -1008 572 43 1 1710 1501 225 21 79 chrX 147544088 147544241 -19106055 - MTD LTR MaLR -14 405 254 1 1710 1323 174 9 4 chrX 147544241 147544466 -19105830 - URR1A DNA MER1_type 0 226 1 1 1710 1501 225 21 79 chrX 147544466 147544620 -19105676 - MTD LTR MaLR -166 253 104 1 1710 3797 50 2 2 chrX 147544620 147545080 -19105216 - L1_Mus1 LINE L1 -1 6566 6107 1 1710 1501 231 21 78 chrX 147545080 147545206 -19105090 - MTD LTR MaLR -300 107 5 1 1710 3536 20 2 0 chrX 147545279 147545674 -19104622 - MTA_Mm LTR MaLR 0 396 1 1 1710 9776 18 1 0 chrX 147545674 147546771 -19103525 - MTA_Mm-int LTR MaLR 0 1098 1 1 1710 651 74 0 21 chrX 147546881 147546977 -19103319 + MTA_Mm LTR MaLR 1 94 -302 1 1710 404 20 0 0 chrX 147546956 147547006 -19103290 - MTA_Mm LTR MaLR -346 50 1 1 1710 831 185 227 48 chrX 147547010 147547283 -19103013 - MTEa LTR MaLR -23 356 35 1 1710 440 359 38 11 chrX 147547430 147547613 -19102683 - MLT1E LTR MaLR -94 559 372 1 1710 798 170 0 52 chrX 147547622 147547777 -19102519 - B1_Mus1 SINE Alu 0 148 2 1 1710 206 306 95 32 chrX 147547856 147548045 -19102251 - L2 LINE L2 -2415 1004 804 1 1710 1253 106 16 5 chrX 147548233 147548422 -19101874 - B2_Mm2 SINE B2 -4 191 1 1 1710 207 300 12 24 chrX 147548717 147548799 -19101497 + MIRb SINE MIR 117 197 -71 1 1710 23 0 0 0 chrX 147548943 147548966 -19101330 + AT_rich Low_complexity Low_complexity 1 23 0 1 1710 1181 56 0 0 chrX 147548966 147549108 -19101188 - B1_Mus2 SINE Alu -5 142 1 1 1710 450 248 165 0 chrX 147549865 147549974 -19100322 - ID_B1 SINE B4 -7 217 91 1 1710 508 265 30 0 chrX 147550052 147550184 -19100112 - B1F SINE Alu -13 136 1 1 1710 228 185 0 0 chrX 147550228 147550282 -19100014 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1710 250 305 0 0 chrX 147550284 147550343 -19099953 - ID4_ SINE ID -11 72 14 1 1710 380 268 150 14 chrX 147550552 147550692 -19099604 + MER5A1 DNA MER1_type 7 165 -1 1 1710 387 0 0 0 chrX 147550734 147550777 -19099519 + (TTTAA)n Simple_repeat Simple_repeat 3 45 0 1 1710 338 211 28 0 chrX 147550857 147550928 -19099368 + ID4 SINE ID 2 74 -9 1 1710 285 315 27 36 chrX 147550956 147551068 -19099228 + PB1D7 SINE Alu 10 120 0 1 1710 351 310 138 11 chrX 147551488 147551677 -19098619 + MamGypLTR3 LTR Gypsy 522 734 -105 1 1710 196 324 0 51 chrX 147551834 147551912 -19098384 + L2c LINE L2 3299 3372 -15 1 1710 296 164 254 0 chrX 147551976 147552043 -19098253 - B1F SINE Alu -57 92 9 1 1710 612 93 269 0 chrX 147552426 147552534 -19097762 - B1_Mus2 SINE Alu 0 147 11 1 1710 543 118 0 0 chrX 147552535 147552611 -19097685 - L1_Mur1 LINE L1 -6693 289 214 1 1710 2949 130 8 16 chrX 147552614 147553106 -19097190 - L1_Mur3 LINE L1 -3881 1999 1512 1 1710 11733 98 8 44 chrX 147553104 147553304 -19096992 + Lx3_Mus LINE L1 4079 4272 -2737 1 1710 838 71 0 0 chrX 147553304 147553417 -19096879 + B1_Mus1 SINE Alu 26 138 -10 1 1710 11733 98 8 44 chrX 147553417 147555333 -19094963 + Lx3_Mus LINE L1 4273 6134 -875 1 1710 477 273 96 13 chrX 147555333 147555489 -19094807 + RMER13A LTR ERVK 210 378 -482 1 1710 4020 132 29 18 chrX 147555851 147556584 -19093712 + Lx6 LINE L1 2580 3320 -2560 1 1710 1145 95 0 0 chrX 147556672 147556820 -19093476 + B1_Mus1 SINE Alu 1 148 0 1 1710 1735 65 12 4 chrX 147557017 147557263 -19093033 + MTB LTR MaLR 148 395 -5 1 1710 1080 95 0 0 chrX 147557263 147557400 -19092896 + B1_Mus1 SINE Alu 1 137 -11 1 1710 216 0 0 0 chrX 147557400 147557424 -19092872 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1710 3719 141 94 63 chrX 147557427 147557649 -19092647 + Lx6 LINE L1 4421 4627 -1253 1 1710 216 0 0 0 chrX 147557649 147557673 -19092623 + (CG)n Simple_repeat Simple_repeat 2 25 0 1 1710 297 0 0 0 chrX 147557673 147557705 -19092591 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1710 3719 141 94 63 chrX 147557705 147558259 -19092037 + Lx6 LINE L1 4628 5221 -659 1 1710 2008 178 121 14 chrX 147558259 147558860 -19091436 - RMER16 LTR ERVK 0 533 1 1 1710 667 147 7 7 chrX 147558861 147558998 -19091298 + Lx6 LINE L1 5218 5354 -526 1 1710 1096 109 0 0 chrX 147558998 147559145 -19091151 + B1_Mus1 SINE Alu 1 147 -1 1 1710 308 130 0 0 chrX 147559170 147559216 -19091080 + Lx6 LINE L1 5341 5386 -494 1 1710 2031 100 9 59 chrX 147559216 147559555 -19090741 + ORR1A2 LTR MaLR 1 322 -5 1 1710 1202 48 14 0 chrX 147559555 147559701 -19090595 + B1_Mus1 SINE Alu 1 148 0 1 1710 10665 131 37 6 chrX 147559738 147561477 -19088819 + ORR1A2-int LTR MaLR 1 1792 0 1 1710 2038 109 17 93 chrX 147561477 147561781 -19088515 + ORR1A2 LTR MaLR 1 286 -41 1 1710 1656 42 0 0 chrX 147561781 147561973 -19088323 + B2_Mm1t SINE B2 1 192 -1 1 1710 2038 109 17 93 chrX 147561973 147562022 -19088274 + ORR1A2 LTR MaLR 287 327 0 1 1710 6888 176 9 64 chrX 147562022 147562433 -19087863 + Lx6 LINE L1 5382 5779 -1681 1 1710 1202 68 0 0 chrX 147562433 147562580 -19087716 + B1_Mm SINE Alu 1 147 0 1 1710 6888 215 50 64 chrX 147562580 147563512 -19086784 + Lx6 LINE L1 5780 6747 -713 1 1710 3241 49 5 0 chrX 147563512 147563900 -19086396 + RLTR10 LTR ERVK 1 390 0 1 1710 6888 215 50 64 chrX 147563900 147564465 -19085831 + Lx6 LINE L1 6748 7274 -186 1 1710 208 254 43 9 chrX 147564466 147564581 -19085715 + (TA)n Simple_repeat Simple_repeat 1 119 0 1 1710 33 0 0 0 chrX 147564623 147564656 -19085640 + AT_rich Low_complexity Low_complexity 1 33 0 1 1710 6319 154 65 8 chrX 147564667 147566342 -19083954 - Lx2B LINE L1 -81 6919 5154 1 1710 27 39 0 19 chrX 147566342 147566376 -19083920 + AT_rich Low_complexity Low_complexity 1 34 0 1 1710 1616 27 16 0 chrX 147566376 147566561 -19083735 - B2_Mm2 SINE B2 -7 188 1 1 1710 27 39 0 19 chrX 147566561 147566578 -19083718 + AT_rich Low_complexity Low_complexity 1 17 0 1 1710 1197 234 49 3 chrX 147566583 147566870 -19083426 + Lx7 LINE L1 6646 6945 -751 1 1710 455 292 17 96 chrX 147566876 147567054 -19083242 + Lx7 LINE L1 7059 7222 -474 1 1710 300 154 0 0 chrX 147567056 147567108 -19083188 + T-rich Low_complexity Low_complexity 1 52 0 1 1710 231 119 0 106 chrX 147567192 147567243 -19083053 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 1 1710 1175 76 0 0 chrX 147567243 147567388 -19082908 - B1_Mus2 SINE Alu -1 146 2 1 1710 231 119 0 106 chrX 147567388 147567402 -19082894 + (TTTG)n Simple_repeat Simple_repeat 2 12 0 1 1710 881 159 24 100 chrX 147567427 147567637 -19082659 - B2_Mm2 SINE B2 0 195 2 1 1710 234 105 0 0 chrX 147567733 147567771 -19082525 + (G)n Simple_repeat Simple_repeat 1 38 0 1 1710 28 0 0 0 chrX 147567845 147567873 -19082423 + AT_rich Low_complexity Low_complexity 1 28 0 1 1710 268 288 95 11 chrX 147567983 147568162 -19082134 + L1ME4a LINE L1 5931 6124 0 1 1710 360 254 176 8 chrX 147568223 147568342 -19081954 - B1F SINE Alu -10 139 1 1 1710 260 307 13 0 chrX 147568361 147568436 -19081860 + ID4 SINE ID 4 79 -4 2 1710 248 150 0 0 chrX 147568439 147568479 -19081817 + L1MB4 LINE L1 6141 6180 0 2 1710 204 287 218 0 chrX 147568795 147568896 -19081400 + L2a LINE L2 3304 3426 0 2 1710 340 276 0 0 chrX 147568934 147569010 -19081286 + ID SINE ID 1 76 -148 2 1710 349 281 67 19 chrX 147569073 147569178 -19081118 + PB1D10 SINE Alu 8 117 0 2 1710 196 213 16 16 chrX 147569361 147569423 -19080873 + CT-rich Low_complexity Low_complexity 3 64 0 2 1710 251 180 0 0 chrX 147569503 147569553 -19080743 - MLT1N2 LTR MaLR 0 562 513 2 1710 779 179 7 33 chrX 147569685 147569835 -19080461 - B1_Mur1 SINE Alu -2 147 2 2 1710 314 45 23 0 chrX 147569981 147570025 -19080271 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 2 1710 433 253 0 99 chrX 147570122 147570152 -19080144 + ID_B1 SINE B4 64 217 -7 2 1710 758 163 0 43 chrX 147570152 147570293 -19080003 + B1_Mur4 SINE Alu 9 143 -7 2 1710 491 246 128 66 chrX 147570338 147570534 -19079762 + B3 SINE B2 1 208 -8 2 1710 3224 95 21 19 chrX 147570534 147571016 -19079280 + Lx LINE L1 6172 6654 0 2 1710 1048 267 97 14 chrX 147571099 147571461 -19078835 + L1MA6 LINE L1 5351 5754 -546 2 1710 459 274 12 44 chrX 147571461 147571621 -19078675 + RSINE1 SINE B4 3 157 -8 2 1710 1036 301 50 78 chrX 147571621 147571659 -19078637 + L1MA6 LINE L1 5755 5778 -522 2 1710 1437 55 0 6 chrX 147571659 147571842 -19078454 + L1_Mus1 LINE L1 6386 6567 0 2 1710 1036 301 50 78 chrX 147571842 147572007 -19078289 + L1MA6 LINE L1 5779 5935 -365 2 1710 2258 79 76 0 chrX 147572333 147572637 -19077659 - ORR1A2 LTR MaLR 0 327 1 2 1710 285 98 0 0 chrX 147572696 147572737 -19077559 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1710 519 305 46 39 chrX 147572743 147573026 -19077270 - B4A SINE B4 -6 286 2 2 1710 21 0 0 0 chrX 147573031 147573052 -19077244 + AT_rich Low_complexity Low_complexity 1 21 0 2 1710 963 223 43 10 chrX 147573052 147573260 -19077036 - B3 SINE B2 0 216 2 2 1710 610 257 7 7 chrX 147574153 147574294 -19076002 + RSINE1 SINE B4 2 142 -23 2 1710 204 231 0 37 chrX 147574303 147574357 -19075939 + CT-rich Low_complexity Low_complexity 1 52 0 2 1710 502 223 0 0 chrX 147574383 147574477 -19075819 + PB1D7 SINE Alu 25 118 -2 2 1710 1351 186 181 42 chrX 147574798 147575130 -19075166 + ORR1C1 LTR MaLR 1 378 0 2 1710 1231 55 0 0 chrX 147575501 147575647 -19074649 + B1_Mus1 SINE Alu 2 147 -1 2 1710 192 40 0 0 chrX 147575647 147575672 -19074624 + (CAAAAA)n Simple_repeat Simple_repeat 1 25 0 2 1710 425 204 87 0 chrX 147575727 147575830 -19074466 - B1F SINE Alu -5 144 33 2 1710 1153 181 34 0 chrX 147575859 147576064 -19074232 - B3 SINE B2 0 216 5 2 1710 216 236 18 0 chrX 147576114 147576169 -19074127 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 1710 809 249 27 22 chrX 147576170 147576355 -19073941 - B4 SINE B4 -97 195 10 2 1710 511 276 8 0 chrX 147576406 147576529 -19073767 - B1F SINE Alu -16 133 10 2 1710 1296 76 0 0 chrX 147576529 147576772 -19073524 + (CAGG)n Simple_repeat Simple_repeat 1 243 0 2 1710 184 382 0 0 chrX 147576887 147576963 -19073333 - MIRb SINE MIR -144 124 49 2 1710 213 222 0 36 chrX 147577579 147577605 -19072691 + T-rich Low_complexity Low_complexity 30 54 0 2 1710 771 163 42 21 chrX 147577605 147577749 -19072547 - B1_Mur1 SINE Alu -2 147 1 2 1710 213 222 0 36 chrX 147577749 147577778 -19072518 + T-rich Low_complexity Low_complexity 1 29 0 2 1710 3627 104 16 27 chrX 147577778 147578341 -19071955 - Lx3_Mus LINE L1 0 7009 6453 2 1710 7045 86 30 7 chrX 147578339 147579364 -19070932 + Lx3_Mus LINE L1 5961 7009 0 2 1710 214 146 0 47 chrX 147579368 147579411 -19070885 + A-rich Low_complexity Low_complexity 4 44 0 2 1710 1260 27 0 0 chrX 147579411 147579558 -19070738 + B1_Mm SINE Alu 1 147 0 2 1710 444 208 0 0 chrX 147579587 147579693 -19070603 + A-rich Low_complexity Low_complexity 1 106 0 2 1710 612 264 0 14 chrX 147579699 147579828 -19070468 + B1_Mur2 SINE Alu 10 138 -11 2 1710 426 85 0 0 chrX 147579828 147579887 -19070409 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 2 1710 612 264 0 14 chrX 147579887 147579899 -19070397 + B1_Mur2 SINE Alu 139 149 0 2 1710 33 25 0 0 chrX 147579989 147580029 -19070267 + AT_rich Low_complexity Low_complexity 1 40 0 2 1710 215 222 0 22 chrX 147580043 147580089 -19070207 + PB1 SINE Alu 67 111 -16 2 1710 830 155 13 60 chrX 147580133 147580284 -19070012 + B1_Mur4 SINE Alu 1 144 -6 2 1710 248 0 0 30 chrX 147580326 147580359 -19069937 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2 1710 233 333 0 0 chrX 147580370 147580436 -19069860 + tRNA-Ala-GCY_ tRNA tRNA 3 68 -7 2 1710 249 245 19 0 chrX 147580804 147580857 -19069439 + CT-rich Low_complexity Low_complexity 4 57 0 2 1710 1223 48 0 14 chrX 147580935 147581083 -19069213 - B1_Mm SINE Alu -1 146 1 2 1710 225 0 0 0 chrX 147581144 147581169 -19069127 + (TC)n Simple_repeat Simple_repeat 2 26 0 2 1710 372 97 0 0 chrX 147581181 147581243 -19069053 + (GA)n Simple_repeat Simple_repeat 1 62 0 2 1710 334 331 43 35 chrX 147581257 147581398 -19068898 - RSINE1 SINE B4 -21 144 3 2 1710 22 35 0 0 chrX 147581606 147581635 -19068661 + AT_rich Low_complexity Low_complexity 1 29 0 2 1710 229 274 0 0 chrX 147581651 147581702 -19068594 + ORR1E LTR MaLR 97 147 -212 2 1710 500 302 7 86 chrX 147581825 147581897 -19068399 + B1F SINE Alu 3 66 -83 2 1710 3239 50 10 2 chrX 147581897 147582299 -19067997 + L1Md_F2 LINE L1 6178 6582 0 2 1710 500 302 7 86 chrX 147582299 147582378 -19067918 + B1F SINE Alu 67 142 -7 2 1710 24 32 0 0 chrX 147582378 147582409 -19067887 + AT_rich Low_complexity Low_complexity 1 31 0 2 1710 390 367 151 9 chrX 147582497 147582953 -19067343 - L2 LINE L2 -862 2557 2037 2 1710 246 279 0 42 chrX 147583068 147583139 -19067157 + ID2 SINE ID 2 69 -14 2 1710 404 268 56 24 chrX 147583187 147583313 -19066983 + B1F SINE Alu 1 130 -19 2 1710 453 19 0 0 chrX 147583414 147583468 -19066828 + (GA)n Simple_repeat Simple_repeat 2 55 0 2 1710 254 343 0 0 chrX 147583484 147583583 -19066713 + L1MA10 LINE L1 6180 6278 -56 2 1710 681 142 324 6 chrX 147583619 147583678 -19066618 + Lx9 LINE L1 7406 7466 -178 2 1710 183 42 0 0 chrX 147583678 147583702 -19066594 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 1710 681 142 324 6 chrX 147583702 147583812 -19066484 + Lx9 LINE L1 7467 7628 -16 2 1710 59 15 0 0 chrX 147583812 147583878 -19066418 + AT_rich Low_complexity Low_complexity 1 66 0 2 1710 567 290 0 7 chrX 147583899 147584045 -19066251 + ID_B1 SINE B4 80 224 0 2 1710 585 227 15 30 chrX 147584418 147584550 -19065746 - ID_B1 SINE B4 -5 219 90 2 1710 311 270 27 0 chrX 147584484 147584558 -19065738 - PB1D10 SINE Alu -41 76 1 2 1710 190 385 40 30 chrX 147584615 147584714 -19065582 - MIRb SINE MIR -150 118 19 2 1710 195 370 60 36 chrX 147584745 147584913 -19065383 + MIR SINE MIR 41 212 -50 2 1710 324 246 39 71 chrX 147585207 147585334 -19064962 - ID_B1 SINE B4 -3 221 99 2 1710 211 200 0 0 chrX 147585340 147585375 -19064921 + (TCCA)n Simple_repeat Simple_repeat 4 38 0 2 1710 291 53 0 0 chrX 147585375 147585413 -19064883 + MT2B2 LTR ERVL 243 280 -304 2 1710 246 32 0 0 chrX 147585413 147585444 -19064852 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1710 1068 44 7 7 chrX 147585444 147585580 -19064716 - B1_Mm SINE Alu -9 138 3 2 1710 334 213 0 0 chrX 147585606 147585667 -19064629 + PB1D7 SINE Alu 1 61 -59 2 1710 312 256 0 82 chrX 147585671 147585756 -19064540 + MER90a LTR ERV1 537 614 0 2 1710 537 222 0 0 chrX 147585821 147585997 -19064299 + GA-rich Low_complexity Low_complexity 2 177 0 2 1710 425 125 0 0 chrX 147586002 147586066 -19064230 + B1_Mus2 SINE Alu 40 103 -44 2 1710 414 240 9 19 chrX 147586483 147586589 -19063707 + PB1D7 SINE Alu 9 113 -7 2 1710 233 277 149 16 chrX 147586813 147586934 -19063362 - MamGypLTR1c LTR Gypsy -343 460 324 2 213 1298 102 11 0 chrX 147586990 147587167 -19063129 + B2_Mm1t SINE B2 1 179 -14 2 1711 269 132 305 102 chrX 147587251 147587369 -19062927 + B2_Mm2 SINE B2 47 188 -7 2 1711 25 0 0 0 chrX 147587547 147587572 -19062724 + AT_rich Low_complexity Low_complexity 1 25 0 2 1711 343 216 54 31 chrX 147587572 147587701 -19062595 + Lx2B LINE L1 5069 5200 -946 2 1711 534 320 13 0 chrX 147587701 147587851 -19062445 + RSINE1 SINE B4 4 155 -10 2 1711 890 150 249 0 chrX 147587892 147588065 -19062231 + B3 SINE B2 1 216 0 2 1711 729 82 91 0 chrX 147588088 147588198 -19062098 + PB1D9 SINE Alu 1 120 0 2 1711 467 298 31 31 chrX 147588216 147588344 -19061952 + B1F SINE Alu 1 128 -21 2 1711 845 263 70 13 chrX 147588353 147588580 -19061716 + B4 SINE B4 52 291 -1 2 1711 225 65 0 0 chrX 147588588 147588619 -19061677 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1711 624 206 45 22 chrX 147588628 147588762 -19061534 + ID_B1 SINE B4 81 217 -7 2 1711 244 344 0 0 chrX 147588784 147588848 -19061448 + ID4 SINE ID 4 67 -16 2 1711 651 44 0 0 chrX 147588842 147588932 -19061364 + B1_Mm SINE Alu 58 147 0 2 1711 747 153 28 35 chrX 147589095 147589237 -19061059 - B1_Mur4 SINE Alu 0 150 10 2 1711 556 234 34 8 chrX 147589401 147589537 -19060759 + Lx2B LINE L1 5668 5820 -344 2 1711 244 303 19 39 chrX 147589634 147589737 -19060559 + Lx2B LINE L1 5937 6037 -407 2 1711 845 274 0 0 chrX 147589740 147589941 -19060355 - B3 SINE B2 -7 209 9 2 1711 405 311 29 0 chrX 147590137 147590240 -19060056 - B1F1 SINE Alu -6 143 38 2 1711 334 272 12 12 chrX 147590272 147590354 -19059942 - ID4_ SINE ID -1 82 1 2 1711 277 274 0 0 chrX 147590444 147590506 -19059790 + ID4 SINE ID 12 73 -10 2 1711 269 51 0 25 chrX 147590508 147590548 -19059748 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 3 1711 308 303 48 159 chrX 147590671 147591024 -19059272 - Lx8 LINE L1 -11 7462 7149 3 1711 748 135 24 0 chrX 147591998 147592124 -19058172 - B1_Mur3 SINE Alu 0 149 21 3 1711 985 165 111 20 chrX 147592192 147592390 -19057906 - B3 SINE B2 0 216 1 3 1711 2330 157 26 49 chrX 147592736 147593244 -19057052 - RMER5 LTR ERV1 -38 496 1 3 1711 294 289 71 138 chrX 147595507 147595732 -19054564 + MER20 DNA MER1_type 1 210 -9 3 1711 375 73 0 0 chrX 147595752 147595807 -19054489 + (TC)n Simple_repeat Simple_repeat 2 56 0 3 1711 269 72 0 18 chrX 147595885 147595942 -19054354 - B2_Mm2 SINE B2 -3 192 137 3 1711 1354 85 6 0 chrX 147596026 147596203 -19054093 - B2_Mm2 SINE B2 -14 181 4 3 1711 512 234 27 0 chrX 147596290 147596401 -19053895 + ID_B1 SINE B4 78 191 -33 3 1711 246 270 16 0 chrX 147596570 147596633 -19053663 + tRNA-Ala-GCA tRNA tRNA 3 66 -9 3 1711 460 235 76 71 chrX 147596641 147596710 -19053586 - L1MA7 LINE L1 -68 6223 6156 3 1711 383 177 250 0 chrX 147596710 147596806 -19053490 - PB1D9 SINE Alu 0 120 1 3 1711 460 235 76 71 chrX 147596806 147596933 -19053363 - L1MA7 LINE L1 -136 6155 6026 3 1711 234 105 0 0 chrX 147597151 147597189 -19053107 - Lx4A LINE L1 0 7058 7021 3 1711 1018 155 193 0 chrX 147597219 147597400 -19052896 - B3 SINE B2 0 216 1 3 1711 204 150 25 0 chrX 147597425 147597465 -19052831 + T-rich Low_complexity Low_complexity 4 44 0 3 1711 535 142 198 0 chrX 147597467 147597573 -19052723 - B1_Mus2 SINE Alu 0 147 21 3 1711 577 189 88 29 chrX 147597642 147597778 -19052518 - B1_Mur3 SINE Alu 0 149 6 3 1711 225 315 0 0 chrX 147597724 147597797 -19052499 - B4 SINE B4 -148 144 72 3 1711 552 233 29 43 chrX 147597799 147597938 -19052358 - B1F2 SINE Alu -8 141 5 3 1711 21 0 0 0 chrX 147597985 147598006 -19052290 + AT_rich Low_complexity Low_complexity 1 21 0 3 1711 357 250 112 40 chrX 147598006 147598131 -19052165 - RSINE1 SINE B4 -21 144 11 3 1711 337 244 70 78 chrX 147598140 147598247 -19052049 - L1MA7 LINE L1 -351 5940 5831 3 1711 253 275 12 48 chrX 147598247 147598331 -19051965 - ID4_ SINE ID 0 83 3 3 1711 337 250 78 74 chrX 147598331 147598368 -19051928 - L1MA7 LINE L1 -470 5830 5793 3 1711 595 266 26 32 chrX 147598438 147598500 -19051796 - L1MA7 LINE L1 -461 5830 5767 3 1711 1642 176 72 124 chrX 147598500 147598751 -19051545 - MTD LTR MaLR 0 419 196 3 1711 1141 68 0 39 chrX 147598751 147598905 -19051391 - B1_Mus1 SINE Alu 0 148 1 3 1711 1642 176 72 124 chrX 147598905 147599095 -19051201 - MTD LTR MaLR -224 195 1 3 1711 595 266 26 32 chrX 147599095 147599222 -19051074 - L1MA7 LINE L1 -525 5766 5642 3 1711 628 81 0 0 chrX 147599551 147599638 -19050658 - B1_Mus1 SINE Alu -58 90 4 3 1711 604 242 32 0 chrX 147599733 147599857 -19050439 + ID_B1 SINE B4 86 213 -11 3 1711 234 307 69 10 chrX 147599894 147599996 -19050300 + MIR SINE MIR 46 153 -109 3 1711 1072 65 7 7 chrX 147600000 147600140 -19050156 + B1_Mm SINE Alu 4 143 -4 3 1711 192 77 0 0 chrX 147600142 147600168 -19050128 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1711 431 233 120 8 chrX 147601549 147601666 -19048630 + ID_B1 SINE B4 86 215 -9 3 1711 1184 201 10 5 chrX 147602061 147602266 -19048030 + B3 SINE B2 1 206 -10 3 1711 180 0 0 0 chrX 147602821 147602841 -19047455 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3 1711 282 143 0 0 chrX 147603975 147604024 -19046272 + (TCCCC)n Simple_repeat Simple_repeat 1 49 0 3 1711 459 0 0 0 chrX 147604515 147604566 -19045730 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1711 246 32 0 0 chrX 147604566 147604596 -19045700 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1711 502 220 0 0 chrX 147605355 147605464 -19044832 - B1F SINE Alu 0 149 41 3 1711 631 146 0 26 chrX 147605597 147605710 -19044586 - B1_Mur1 SINE Alu 0 149 40 3 1711 252 200 0 0 chrX 147605984 147606034 -19044262 - ID4 SINE ID -30 53 4 3 1711 819 186 14 7 chrX 147606687 147606833 -19043463 + B1_Mur2 SINE Alu 1 147 -2 3 1711 928 127 35 35 chrX 147606837 147607008 -19043288 + B2_Mm2 SINE B2 1 171 -24 3 1711 25 0 0 0 chrX 147607285 147607310 -19042986 + AT_rich Low_complexity Low_complexity 1 25 0 3 1711 266 186 0 0 chrX 147607530 147607581 -19042715 + B1_Mur4 SINE Alu 53 104 -46 3 1711 1394 79 5 21 chrX 147607585 147607778 -19042518 - B2_Mm1a SINE B2 -3 190 1 3 1711 1281 69 5 64 chrX 147607782 147607969 -19042327 - B2_Mm2 SINE B2 -19 176 1 3 1711 236 321 0 12 chrX 147608185 147608267 -19042029 - ID4_ SINE ID -1 82 2 3 1711 587 229 13 34 chrX 147608267 147608416 -19041880 - ID_B1 SINE B4 0 224 79 3 1711 259 291 16 93 chrX 147608311 147608440 -19041856 - MT2B2 LTR ERVL -327 257 139 3 1711 411 281 53 30 chrX 147608475 147608607 -19041689 - L1MB5 LINE L1 -104 6070 5936 3 1711 357 24 0 0 chrX 147608678 147608720 -19041576 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1711 225 300 75 43 chrX 147608836 147608930 -19041366 - B4A SINE B4 -148 144 48 3 1711 1370 264 107 27 chrX 147608946 147609518 -19040778 - L1MB5 LINE L1 -281 5898 5272 3 1711 299 210 8 165 chrX 147609569 147609693 -19040603 + B1_Mur1 SINE Alu 7 107 -42 3 1711 302 203 53 13 chrX 147609920 147609995 -19040301 - PB1D10 SINE Alu 0 117 40 3 1711 858 164 194 17 chrX 147610184 147610364 -19039932 - B3 SINE B2 -4 212 1 3 1711 655 228 136 0 chrX 147610393 147610555 -19039741 - B3 SINE B2 -9 207 24 3 1711 376 354 6 33 chrX 147610711 147610892 -19039404 - Lx7 LINE L1 -384 7312 7137 3 1711 347 0 0 23 chrX 147610981 147611025 -19039271 + (TTA)n Simple_repeat Simple_repeat 3 45 0 3 1711 521 252 8 31 chrX 147611029 147611156 -19039140 - RSINE1 SINE B4 -29 136 13 3 1711 1078 273 15 4 chrX 147611312 147611577 -19038719 - B4A SINE B4 -14 278 11 3 1711 422 218 0 0 chrX 147611619 147611697 -19038599 + PB1D10 SINE Alu 12 89 -28 3 1711 380 295 60 8 chrX 147611736 147611869 -19038427 + B1F SINE Alu 1 140 -9 3 1711 216 235 0 38 chrX 147612132 147612185 -19038111 - B1F2 SINE Alu -98 51 1 3 1711 284 239 28 56 chrX 147612343 147612414 -19037882 - ID4 SINE ID 0 83 15 3 1711 810 236 148 6 chrX 147612508 147612691 -19037605 - ID_B1 SINE B4 -8 216 8 3 1711 24 53 0 0 chrX 147612699 147612737 -19037559 + AT_rich Low_complexity Low_complexity 1 38 0 3 1711 423 0 0 0 chrX 147612747 147612794 -19037502 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1711 546 211 56 70 chrX 147612807 147612950 -19037346 - B3A SINE B2 -56 142 2 3 1711 240 258 30 15 chrX 147613000 147613067 -19037229 - PB1 SINE Alu -32 95 28 3 1711 218 239 100 112 chrX 147613152 147613312 -19036984 + MIRc SINE MIR 100 260 -8 3 1711 495 198 69 0 chrX 147613373 147613474 -19036822 - B1_Mur1 SINE Alu 0 149 42 3 1711 242 188 337 36 chrX 147613468 147613551 -19036745 + PB1D9 SINE Alu 13 120 0 3 1711 387 270 48 39 chrX 147613927 147614031 -19036265 - B1F SINE Alu -8 109 5 3 1711 539 204 0 36 chrX 147614153 147614265 -19036031 + PB1D10 SINE Alu 4 111 -6 3 1711 498 279 92 8 chrX 147614287 147614417 -19035879 + ID_B1 SINE B4 77 217 -7 3 1711 829 234 0 59 chrX 147614551 147614755 -19035541 - B3A SINE B2 -6 192 1 3 1711 444 290 0 36 chrX 147614843 147614954 -19035342 - PB1D10 SINE Alu -10 107 1 3 1711 714 244 0 0 chrX 147614997 147615132 -19035164 - B3 SINE B2 -10 206 72 3 1711 580 307 15 0 chrX 147615323 147615460 -19034836 - ID_B1 SINE B4 -84 140 2 3 1711 235 344 43 65 chrX 147615491 147615548 -19034748 + L1MC LINE L1 5378 5437 -2445 3 1711 285 213 93 0 chrX 147615548 147615623 -19034673 + ID4 SINE ID 2 83 0 3 1711 235 344 43 65 chrX 147615623 147615795 -19034501 + L1MC LINE L1 5438 5602 -2280 3 1711 209 164 36 0 chrX 147615805 147615860 -19034436 + (TA)n Simple_repeat Simple_repeat 2 58 0 3 1711 377 246 0 8 chrX 147615877 147615996 -19034300 + (TA)n Simple_repeat Simple_repeat 2 119 0 3 1711 384 311 16 40 chrX 147616198 147616322 -19033974 + PB1 SINE Alu 5 125 -2 3 1711 386 293 40 24 chrX 147616346 147616472 -19033824 + B1F SINE Alu 1 128 -21 3 1711 269 243 95 0 chrX 147616477 147616551 -19033745 + BC1_Mm scRNA scRNA 15 95 -57 3 1711 620 225 20 40 chrX 147616722 147616870 -19033426 + B1F1 SINE Alu 4 148 -1 3 1711 255 149 358 0 chrX 147617205 147617272 -19033024 + URR1B DNA MER1_type 1 91 -134 3 1711 300 327 108 9 chrX 147617376 147617487 -19032809 - PB1 SINE Alu 0 127 6 3 1711 22 0 0 0 chrX 147617579 147617601 -19032695 + AT_rich Low_complexity Low_complexity 1 22 0 3 1711 438 20 0 0 chrX 147617677 147617728 -19032568 + (TA)n Simple_repeat Simple_repeat 2 52 0 3 1711 432 37 0 0 chrX 147617728 147617781 -19032515 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1711 409 232 73 10 chrX 147618185 147618281 -19032015 - RSINE1 SINE B4 -63 102 1 3 1711 318 150 63 48 chrX 147618333 147618396 -19031900 - MIRb SINE MIR -6 262 199 3 1711 268 364 13 0 chrX 147618597 147618674 -19031622 - ID4 SINE ID -3 80 3 3 1711 1352 144 4 18 chrX 147618733 147618959 -19031337 - URR1A DNA MER1_type -3 223 1 3 1711 1068 63 0 0 chrX 147618993 147619136 -19031160 + B1_Mus1 SINE Alu 6 148 0 3 1711 421 238 104 9 chrX 147619324 147619430 -19030866 - PB1D10 SINE Alu -1 116 1 3 1711 240 191 43 0 chrX 147619450 147619497 -19030799 + CT-rich Low_complexity Low_complexity 2 50 0 3 1711 322 291 39 100 chrX 147619534 147619664 -19030632 - PB1 SINE Alu 0 127 6 3 1711 245 333 62 48 chrX 147619664 147619678 -19030618 - ID_B1 SINE B4 0 223 78 3 1711 204 67 0 0 chrX 147619693 147619723 -19030573 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1711 1090 48 0 40 chrX 147619723 147619875 -19030421 - B1_Mm SINE Alu 0 147 2 4 1711 224 234 64 0 chrX 147619890 147619937 -19030359 - B1F1 SINE Alu -56 93 44 4 1711 596 142 452 34 chrX 147619955 147620101 -19030195 - B3 SINE B2 -8 208 2 4 1711 287 78 0 19 chrX 147620122 147620174 -19030122 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 4 1711 259 216 39 0 chrX 147620295 147620346 -19029950 - ID_B1 SINE B4 -128 96 44 4 1711 861 229 32 9 chrX 147620367 147620587 -19029709 - L1M4 LINE L1 -552 5622 5398 4 1711 382 244 236 30 chrX 147620596 147620761 -19029535 - MER44B DNA MER2_type -2 548 350 4 1711 317 272 0 58 chrX 147620800 147620886 -19029410 + B4 SINE B4 4 84 -208 4 1711 384 343 38 9 chrX 147621031 147621137 -19029159 - PB1D10 SINE Alu -3 114 6 4 1711 1623 169 104 12 chrX 147621167 147621502 -19028794 + ORR1D2 LTR MaLR 1 366 -4 4 1711 4351 170 91 176 chrX 147621507 147622999 -19027297 + ORR1D2-int LTR MaLR 3 1368 -2 4 1711 766 224 66 11 chrX 147623005 147623277 -19027019 + ORR1D2 LTR MaLR 5 361 -9 4 1711 733 214 14 20 chrX 147623365 147623513 -19026783 - RSINE1 SINE B4 -17 148 2 4 1711 316 262 146 0 chrX 147623534 147623637 -19026659 - PB1D7 SINE Alu -2 118 1 4 1711 235 360 47 0 chrX 147623637 147623722 -19026574 - MER44B DNA MER2_type -453 97 9 4 1711 618 147 9 29 chrX 147623869 147623974 -19026322 - B1_Mur1 SINE Alu 0 149 47 4 1711 282 264 28 0 chrX 147623975 147624047 -19026249 - L1M4 LINE L1 -911 5235 5162 4 1711 1002 207 15 0 chrX 147624129 147624327 -19025969 - B3 SINE B2 -15 201 1 4 1711 809 320 24 15 chrX 147624421 147624806 -19025490 - L1M4 LINE L1 -1004 5136 4749 4 1711 697 280 36 16 chrX 147624848 147625040 -19025256 - ID_B1 SINE B4 -22 202 7 4 1711 270 296 308 36 chrX 147625070 147625345 -19024951 - L1M4 LINE L1 -3388 2758 2409 4 1711 847 186 137 0 chrX 147625420 147625603 -19024693 + B3 SINE B2 2 209 -7 4 1711 824 231 17 13 chrX 147625636 147625822 -19024474 + B3 SINE B2 1 179 -14 4 1711 340 230 14 0 chrX 147625848 147625922 -19024374 - ID4 SINE ID -7 76 2 4 1711 390 223 129 2 chrX 147625936 147626033 -19024263 - PB1 SINE Alu -7 120 13 4 1711 238 289 61 20 chrX 147626060 147626159 -19024137 - PB1D10 SINE Alu -13 104 2 4 1711 678 25 0 0 chrX 147626172 147626252 -19024044 + (TC)n Simple_repeat Simple_repeat 1 80 0 4 1711 1169 22 0 0 chrX 147626252 147626387 -19023909 - B1_Mus2 SINE Alu -12 135 1 4 1711 231 213 132 13 chrX 147626407 147626425 -19023871 - PB1D10 SINE Alu -2 115 31 4 1711 279 158 35 17 chrX 147626425 147626483 -19023813 - ID_B1 SINE B4 -54 170 112 4 1711 434 134 433 0 chrX 147626503 147626600 -19023696 - B1_Mur4 SINE Alu -9 141 3 4 1711 427 156 31 20 chrX 147626799 147626897 -19023399 + L1MC4 LINE L1 7941 8039 -3 4 1711 566 220 37 68 chrX 147626920 147627081 -19023215 + RSINE1 SINE B4 4 159 -6 4 1711 1662 20 0 0 chrX 147627226 147627424 -19022872 - L1Md_A LINE L1 -2 6580 6383 4 1711 1454 28 77 6 chrX 147627424 147627605 -19022691 - B2_Mm2 SINE B2 0 195 2 4 1711 599 236 91 15 chrX 147627815 147628013 -19022283 - L1M4 LINE L1 -1189 4957 4745 4 1711 1050 227 14 0 chrX 147628048 147628268 -19022028 - ID_B1 SINE B4 0 224 2 4 1711 895 147 0 20 chrX 147628559 147628575 -19021721 - B1_Mur4 SINE Alu -6 144 129 4 1711 189 0 0 0 chrX 147628575 147628596 -19021700 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 4 1711 895 147 0 20 chrX 147628596 147628725 -19021571 - B1_Mur4 SINE Alu -22 128 2 4 1711 351 0 0 0 chrX 147628744 147628783 -19021513 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 1711 1105 76 0 0 chrX 147628783 147628928 -19021368 - B1_Mm SINE Alu -2 145 1 4 1711 8201 66 8 2 chrX 147628931 147630116 -19020180 - L1_Mus3 LINE L1 0 6638 5447 4 1711 1277 14 0 0 chrX 147630135 147630281 -19020015 - B1_Mm SINE Alu 0 147 2 4 1711 267 79 0 0 chrX 147630282 147630320 -19019976 - L1_Mus3 LINE L1 -422 5461 5424 4 1711 722 248 0 7 chrX 147630320 147630458 -19019838 - B1_Mur1 SINE Alu -11 138 2 4 1711 732 239 142 20 chrX 147630458 147630852 -19019444 - L1_Mur3 LINE L1 -795 5502 5040 4 1711 405 289 110 13 chrX 147630870 147630894 -19019402 - B4A SINE B4 -44 248 127 4 1711 555 203 154 0 chrX 147630894 147631017 -19019279 - B1_Mur2 SINE Alu -6 143 2 4 1711 1025 271 50 0 chrX 147631017 147631236 -19019060 - B4A SINE B4 -60 232 3 4 1711 454 137 68 0 chrX 147631388 147631461 -19018835 + B1_Mur2 SINE Alu 65 142 -7 4 1711 249 310 34 50 chrX 147631398 147631517 -19018779 + B4A SINE B4 164 280 -12 4 1711 335 317 48 0 chrX 147631700 147631804 -19018492 + RSINE1 SINE B4 3 111 -54 4 1711 348 236 9 26 chrX 147631821 147631934 -19018362 + L1MB3 LINE L1 6073 6183 0 4 1711 1780 95 4 0 chrX 147632110 147632363 -19017933 + Lx2 LINE L1 6744 6997 0 4 1711 233 289 62 50 chrX 147633408 147633488 -19016808 - ID2 SINE ID 0 83 3 4 1711 228 319 0 53 chrX 147633609 147633685 -19016611 - ID4 SINE ID -9 74 3 4 1711 360 270 90 0 chrX 147633723 147633823 -19016473 - B1F SINE Alu -5 144 36 4 1711 848 232 70 28 chrX 147634403 147634616 -19015680 + ID_B1 SINE B4 1 222 -2 4 1711 756 255 141 0 chrX 147634830 147635022 -19015274 - ID_B1 SINE B4 -4 220 2 4 1711 22 0 0 0 chrX 147635200 147635222 -19015074 + AT_rich Low_complexity Low_complexity 1 22 0 4 1711 231 308 0 0 chrX 147635280 147635332 -19014964 + PB1D10 SINE Alu 26 77 -40 4 1711 942 286 85 14 chrX 147635861 147636155 -19014141 + MLT1D LTR MaLR 183 497 -8 4 1711 185 349 107 27 chrX 147636195 147636307 -19013989 - L2b LINE L2 -6 3369 3249 4 1711 238 369 35 35 chrX 147636687 147636802 -19013494 - PB1D9 SINE Alu -5 115 1 4 1711 326 213 174 62 chrX 147636812 147637007 -19013289 - L1MC4a LINE L1 -422 7460 7244 4 1711 211 141 200 86 chrX 147637071 147637084 -19013212 - PB1 SINE Alu 0 127 50 4 1711 274 175 70 0 chrX 147637084 147637141 -19013155 - ID_B1 SINE B4 -34 190 130 4 1711 787 194 45 22 chrX 147637233 147637412 -19012884 - B2_Mm2 SINE B2 -9 186 4 4 1711 378 150 0 0 chrX 147637470 147637530 -19012766 - B3 SINE B2 -86 130 71 4 1711 721 229 62 25 chrX 147637516 147637677 -19012619 - B3 SINE B2 -48 168 2 4 1711 1030 103 7 14 chrX 147637703 147637850 -19012446 - B1_Mus1 SINE Alu -2 146 1 4 1711 471 93 40 0 chrX 147637900 147637975 -19012321 + RMER4A LTR ERVK 1 78 -388 4 1711 988 221 11 0 chrX 147638278 147638468 -19011828 - B3 SINE B2 0 216 25 4 1711 280 250 0 104 chrX 147638549 147638616 -19011680 + B4A SINE B4 86 145 -147 4 1711 467 239 11 0 chrX 147638566 147638654 -19011642 + PB1D10 SINE Alu 11 99 -18 4 1711 23 33 0 0 chrX 147638670 147638700 -19011596 + AT_rich Low_complexity Low_complexity 1 30 0 4 1711 594 257 19 26 chrX 147639472 147639628 -19010668 + RSINE1 SINE B4 11 165 0 4 1711 764 152 0 8 chrX 147639883 147640009 -19010287 + B1_Mus2 SINE Alu 2 126 -21 4 1711 380 271 7 48 chrX 147639884 147640031 -19010265 + ID_B1 SINE B4 84 224 0 4 1711 212 256 0 0 chrX 147640040 147640083 -19010213 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1711 243 352 0 33 chrX 147640111 147640202 -19010094 + ID_B1 SINE B4 78 165 -59 4 1711 386 252 40 20 chrX 147640124 147640225 -19010071 + PB1D7 SINE Alu 9 111 -9 4 1711 289 345 35 26 chrX 147640238 147640354 -19009942 + PB1D10 SINE Alu 1 117 0 4 1711 429 270 25 34 chrX 147640412 147640531 -19009765 + PB1D9 SINE Alu 2 119 -1 4 1711 23 0 0 0 chrX 147640703 147640726 -19009570 + AT_rich Low_complexity Low_complexity 1 23 0 4 1711 22 0 0 0 chrX 147640829 147640851 -19009445 + AT_rich Low_complexity Low_complexity 1 22 0 4 1711 1123 304 89 2 chrX 147640972 147641410 -19008886 - Lx8 LINE L1 -309 7164 6689 4 1711 238 333 82 53 chrX 147641521 147641692 -19008604 - L1M7 LINE L1 -4671 1547 1372 4 1711 320 299 0 25 chrX 147642405 147642484 -19007812 + ID4 SINE ID 2 78 -5 4 1711 728 261 41 14 chrX 147642532 147642750 -19007546 + ID_B1 SINE B4 1 224 0 4 1711 670 279 94 6 chrX 147642754 147642934 -19007362 + B3 SINE B2 2 197 -19 4 1711 812 268 5 15 chrX 147643492 147643689 -19006607 + B3A SINE B2 1 195 -3 4 1711 372 359 8 8 chrX 147644205 147644334 -19005962 - ID_B1 SINE B4 -5 219 91 4 1711 981 217 43 5 chrX 147644456 147644664 -19005632 - B3 SINE B2 0 216 1 4 1711 587 250 20 20 chrX 147644784 147644931 -19005365 - B1_Mur1 SINE Alu -1 148 2 4 1711 639 244 68 8 chrX 147644932 147645064 -19005232 - ID_B1 SINE B4 0 224 85 4 1711 749 214 7 7 chrX 147645148 147645294 -19005002 - B1_Mur3 SINE Alu -2 147 2 4 1711 219 326 0 0 chrX 147645670 147645716 -19004580 + ID4_ SINE ID 12 57 -26 4 1711 807 190 13 52 chrX 147645930 147646085 -19004211 - B1_Mur2 SINE Alu 0 149 1 4 1711 502 282 13 0 chrX 147646335 147646448 -19003848 + PB1D10 SINE Alu 1 124 -3 4 1711 1946 130 87 6 chrX 147646470 147646802 -19003494 - RLTR15 LTR ERVK 0 359 1 4 1711 4339 184 51 44 chrX 147646807 147648036 -19002260 - MYSERV6-int LTR ERVK -54 8905 7821 4 1711 274 239 230 0 chrX 147648043 147648156 -19002140 - RMER4A LTR ERVK -19 447 309 4 1711 287 135 0 0 chrX 147648178 147648230 -19002066 - MYSERV16_I-int LTR ERVK -1426 900 849 4 1711 333 50 402 19 chrX 147648267 147648369 -19001927 - B2_Mm2 SINE B2 -8 187 47 4 1711 1360 63 29 0 chrX 147648382 147648556 -19001740 - B2_Mm1t SINE B2 -14 179 1 4 1711 1494 39 17 0 chrX 147648559 147648740 -19001556 - B2_Mm2 SINE B2 -10 185 2 4 1711 648 230 54 42 chrX 147648742 147649022 -19001274 - MYSERV6-int LTR ERVK -1502 824 569 4 1711 1182 202 30 107 chrX 147649041 147649245 -19001051 - MYSERV6-int LTR ERVK -1933 393 227 4 1711 1676 21 0 0 chrX 147649245 147649433 -19000863 - B2_Mm1a SINE B2 -4 189 2 4 1711 1182 217 29 93 chrX 147649433 147649649 -19000647 - MYSERV6-int LTR ERVK -2100 226 30 4 1711 1558 229 69 19 chrX 147650307 147650729 -18999567 - MYSERV6-int LTR ERVK -7323 1636 1194 5 1711 628 252 98 44 chrX 147650728 147651002 -18999294 - MYSERV6-int LTR ERVK -6204 346 58 5 1711 257 242 0 21 chrX 147651004 147651101 -18999195 - MYSERV6-int LTR ERVK -6398 152 58 5 1711 486 0 0 0 chrX 147651358 147651412 -18998884 + (TTTC)n Simple_repeat Simple_repeat 2 55 0 5 1711 8752 58 9 5 chrX 147651461 147653340 -18996956 - L1Md_F2 LINE L1 0 6582 4691 5 1711 573 138 0 0 chrX 147654041 147654135 -18996161 + (TTTC)n Simple_repeat Simple_repeat 2 95 0 5 1711 2312 109 67 24 chrX 147654276 147654652 -18995644 - RLTR12A LTR ERVK -174 394 3 5 1711 185 65 32 0 chrX 147654782 147654813 -18995483 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1711 1109 260 42 29 chrX 147654852 147655260 -18995036 - L1MA4 LINE L1 -411 5889 5477 5 1711 1445 314 79 12 chrX 147655291 147655888 -18994408 - Lx8 LINE L1 -29 7444 6808 5 1711 748 281 71 37 chrX 147656156 147656481 -18993815 - Lx8 LINE L1 -4 7469 7134 5 1711 491 215 9 53 chrX 147656675 147656788 -18993508 - B1_Mur2 SINE Alu -1 148 41 5 1711 771 289 11 22 chrX 147656894 147657170 -18993126 - L1MA4 LINE L1 -364 5936 5664 5 1711 347 217 72 0 chrX 147657181 147657250 -18993046 - B3A SINE B2 -121 77 4 5 1711 734 305 5 41 chrX 147657261 147657456 -18992840 - B3A SINE B2 0 198 11 5 1711 346 269 108 0 chrX 147657454 147657547 -18992749 - B3 SINE B2 -108 108 6 5 1711 318 217 37 19 chrX 147657554 147657662 -18992634 - L1MA4 LINE L1 -934 5366 5257 5 1711 351 313 0 0 chrX 147658833 147658916 -18991380 - ID_B1 SINE B4 -63 161 79 5 1711 330 276 113 9 chrX 147658946 147659052 -18991244 + PB1 SINE Alu 6 122 -5 5 1711 1144 61 0 13 chrX 147659143 147659293 -18991003 - B1_Mus1 SINE Alu 0 148 1 5 1711 361 282 18 72 chrX 147659360 147659471 -18990825 - RSINE1 SINE B4 -8 157 53 5 1711 709 278 40 0 chrX 147659721 147659894 -18990402 - B3A SINE B2 -18 180 1 5 1711 1208 116 21 10 chrX 147659901 147660093 -18990203 - B2_Mm2 SINE B2 -1 194 1 5 1711 285 29 0 0 chrX 147660119 147660153 -18990143 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1711 726 239 0 7 chrX 147660320 147660455 -18989841 + RSINE1 SINE B4 3 136 -29 5 1711 502 231 27 82 chrX 147660513 147660602 -18989694 + B1_Mur1 SINE Alu 5 94 -55 5 1711 1103 192 47 0 chrX 147660602 147660815 -18989481 - URR1A DNA MER1_type 0 226 4 5 1711 502 231 27 82 chrX 147660815 147660871 -18989425 + B1_Mur1 SINE Alu 95 142 -7 5 1711 1504 52 5 10 chrX 147661437 147661630 -18988666 - B2_Mm1a SINE B2 -1 192 1 5 1711 846 244 19 19 chrX 147661705 147661910 -18988386 - B3 SINE B2 -10 206 2 5 1711 315 311 60 24 chrX 147661911 147662079 -18988217 - L1MB4 LINE L1 -40 6140 5967 5 1711 903 216 10 5 chrX 147662226 147662421 -18987875 - Lx9 LINE L1 -216 7428 7233 5 1711 1134 219 173 13 chrX 147662423 147662816 -18987480 - L1_Rod LINE L1 -6324 848 393 5 1711 454 170 85 0 chrX 147662870 147662964 -18987332 - L1MB4 LINE L1 -207 5973 5872 5 1711 865 153 0 39 chrX 147662977 147663133 -18987163 - B1_Mur4 SINE Alu 0 150 1 5 1711 657 256 26 79 chrX 147663178 147663328 -18986968 - L1MB4 LINE L1 -317 5863 5729 5 1711 297 315 0 0 chrX 147663328 147663401 -18986895 - ID4_ SINE ID -10 73 1 5 1711 657 256 26 79 chrX 147663401 147663517 -18986779 - L1MB4 LINE L1 -452 5728 5611 5 1711 290 220 0 0 chrX 147663528 147663578 -18986718 - ID2 SINE ID -28 55 6 5 1711 180 97 0 0 chrX 147663625 147663656 -18986640 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1711 1097 72 0 0 chrX 147663860 147663999 -18986297 - B1_Mus2 SINE Alu -8 139 1 5 1711 252 143 0 0 chrX 147664011 147664053 -18986243 + (GAA)n Simple_repeat Simple_repeat 2 43 0 5 1711 548 288 0 8 chrX 147664063 147664189 -18986107 + B1_Mur1 SINE Alu 5 129 -20 5 1711 521 302 16 0 chrX 147665165 147665294 -18985002 - B4A SINE B4 -154 138 8 5 1711 444 269 0 0 chrX 147665568 147665661 -18984635 + B4A SINE B4 200 292 0 5 1711 317 146 18 0 chrX 147665708 147665763 -18984533 - HAL1 LINE L1 -1252 1255 1200 5 1711 647 259 13 43 chrX 147665803 147665975 -18984321 - ID_B1 SINE B4 -65 227 58 5 1711 389 277 104 26 chrX 147666054 147666169 -18984127 - B1F1 SINE Alu 0 149 26 5 1711 514 314 28 35 chrX 147666256 147666398 -18983898 + ID_B1 SINE B4 84 224 0 5 1711 3181 68 0 42 chrX 147666527 147666975 -18983321 - L1Md_F2 LINE L1 -12 6570 6142 5 1711 22 35 0 0 chrX 147667029 147667058 -18983238 + AT_rich Low_complexity Low_complexity 1 29 0 5 1711 21 57 0 0 chrX 147667444 147667479 -18982817 + AT_rich Low_complexity Low_complexity 1 35 0 5 1711 251 85 0 21 chrX 147667814 147667862 -18982434 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 5 1711 3722 53 2 4 chrX 147667950 147668424 -18981872 + L1Md_F2 LINE L1 6096 6568 -14 5 1711 802 251 65 5 chrX 147668477 147668661 -18981635 + ID_B1 SINE B4 6 200 -24 5 1711 735 221 14 0 chrX 147668932 147669077 -18981219 + B1_Mur1 SINE Alu 1 147 -2 5 1711 25 31 0 0 chrX 147669092 147669124 -18981172 + AT_rich Low_complexity Low_complexity 1 32 0 5 1711 443 296 8 25 chrX 147669318 147669436 -18980860 - PB1D10 SINE Alu -1 116 1 5 1711 242 292 28 0 chrX 147669443 147669515 -18980781 + CT-rich Low_complexity Low_complexity 3 76 0 5 1711 299 338 13 0 chrX 147669517 147669594 -18980702 - ID4 SINE ID -5 78 1 5 1711 715 220 0 7 chrX 147669627 147669769 -18980527 - B1_Mur3 SINE Alu -6 143 3 5 1711 312 229 8 6 chrX 147669825 147669906 -18980390 + PB1D10 SINE Alu 5 86 -63 5 1711 243 0 0 0 chrX 147669944 147669971 -18980325 + (CAAAA)n Simple_repeat Simple_repeat 1 27 0 5 1711 552 318 63 69 chrX 147669971 147670160 -18980136 + B4 SINE B4 91 278 -14 5 1711 3098 63 10 0 chrX 147670262 147670658 -18979638 - MTB LTR MaLR 0 400 1 5 1711 341 308 42 17 chrX 147670791 147670910 -18979386 - B1F SINE Alu -2 147 26 5 1711 21 57 0 0 chrX 147670919 147670954 -18979342 + AT_rich Low_complexity Low_complexity 1 35 0 5 1711 458 118 29 10 chrX 147671286 147671389 -18978907 + (TA)n Simple_repeat Simple_repeat 2 106 0 5 1711 685 208 27 14 chrX 147671600 147671746 -18978550 - B1_Mur4 SINE Alu -1 149 2 5 1711 869 174 99 0 chrX 147671790 147671962 -18978334 - B3 SINE B2 0 216 28 5 1711 951 105 0 0 chrX 147672653 147672786 -18977510 - B1_Mus1 SINE Alu 0 148 16 5 1711 35430 35 0 0 chrX 147672845 147678426 -18971870 + L1Md_T LINE L1 1 5589 -297 5 1711 8979 5 0 0 chrX 147678426 147679422 -18970874 + L1Md_T LINE L1 5590 6585 0 5 1711 192 77 0 0 chrX 147679942 147679968 -18970328 + (A)n Simple_repeat Simple_repeat 1 26 0 5 1711 194 352 11 22 chrX 147680023 147680113 -18970183 - L2c LINE L2 -51 3336 3248 5 1711 245 125 25 0 chrX 147680884 147680924 -18969372 - ORR1C2 LTR MaLR -342 42 2 5 1711 1463 168 99 12 chrX 147680934 147681308 -18968988 - Lx9 LINE L1 -161 7483 7030 5 1711 2293 202 32 2 chrX 147681302 147681733 -18968563 - Lx9 LINE L1 -791 6853 6410 5 1711 869 59 0 0 chrX 147681734 147681878 -18968418 - L1_Mus1 LINE L1 0 6567 6444 5 1711 2611 198 44 20 chrX 147681881 147682530 -18967766 - Lx9 LINE L1 -1668 5976 5279 5 1711 398 234 0 0 chrX 147682561 147682638 -18967658 - ID4 SINE ID -6 77 1 5 1711 333 315 158 18 chrX 147682642 147682813 -18967483 - MIRb SINE MIR -43 225 31 5 1711 582 367 29 10 chrX 147683731 147683940 -18966356 - MER58A DNA MER1_type -6 218 6 5 1711 809 276 72 28 chrX 147683966 147684108 -18966188 - L1ME2z LINE L1 -400 6044 5900 5 1711 369 0 0 0 chrX 147684108 147684149 -18966147 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1711 809 276 72 28 chrX 147684149 147684439 -18965857 - L1ME2z LINE L1 -545 5899 5593 5 1711 721 211 0 29 chrX 147684461 147684598 -18965698 + B1_Mur1 SINE Alu 2 134 -15 5 1711 223 262 16 16 chrX 147684604 147684666 -18965630 + GA-rich Low_complexity Low_complexity 3 64 0 5 1711 342 217 87 116 chrX 147684666 147684771 -18965525 - L1MD LINE L1 -2403 5592 5484 5 1711 390 286 0 67 chrX 147684771 147684891 -18965405 - PB1D10 SINE Alu -5 112 1 5 1711 342 217 87 116 chrX 147684891 147684957 -18965339 - L1MD LINE L1 -2512 5483 5426 5 1711 541 296 65 36 chrX 147684960 147684986 -18965310 - B3A SINE B2 -3 195 173 5 1711 243 0 0 0 chrX 147684986 147685013 -18965283 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1711 541 296 65 36 chrX 147685013 147685154 -18965142 - B3A SINE B2 -26 172 23 5 1711 275 219 125 75 chrX 147685174 147685575 -18964721 - L1ME2z LINE L1 -743 5403 5023 5 1711 2173 95 3 56 chrX 147685575 147685931 -18964365 - L1_Mus2 LINE L1 0 6566 6230 5 1711 248 264 97 135 chrX 147685931 147686070 -18964226 - L1ME2z LINE L1 -1124 5022 4884 5 1711 432 286 42 32 chrX 147686084 147686301 -18963995 - L1M4 LINE L1 -697 5481 5263 5 1711 828 147 0 95 chrX 147686311 147686469 -18963827 - B1_Mur4 SINE Alu -2 148 6 5 1711 293 285 45 122 chrX 147686342 147686498 -18963798 - B4A SINE B4 -86 206 63 5 1711 587 282 144 3 chrX 147686498 147686811 -18963485 - L1M4 LINE L1 -899 5247 4891 5 1711 247 270 0 0 chrX 147687134 147687197 -18963099 - L1M4 LINE L1 -1242 4904 4842 5 1711 365 272 16 0 chrX 147687198 147687323 -18962973 - L1M4 LINE L1 -1432 4714 4588 5 1711 399 296 17 9 chrX 147687413 147687529 -18962767 + PB1D9 SINE Alu 1 117 -3 5 1711 1309 242 101 71 chrX 147687529 147688040 -18962256 + L1MA7 LINE L1 5323 5873 -418 5 1711 1114 228 0 0 chrX 147688040 147688255 -18962041 + B3 SINE B2 2 216 0 5 1711 1309 242 101 71 chrX 147688255 147688271 -18962025 + L1MA7 LINE L1 5874 5878 -413 5 1711 821 266 44 10 chrX 147688271 147688476 -18961820 - B3 SINE B2 -4 212 1 5 1711 1309 242 101 71 chrX 147688476 147688551 -18961745 + L1MA7 LINE L1 5879 5944 -347 5 1711 1076 126 51 0 chrX 147688551 147688726 -18961570 + L1_Mur3 LINE L1 5321 5504 -376 5 1711 25 0 0 0 chrX 147688881 147688906 -18961390 + AT_rich Low_complexity Low_complexity 1 25 0 5 1711 198 0 0 0 chrX 147688911 147688933 -18961363 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 1711 513 47 0 0 chrX 147688933 147688996 -18961300 + (GA)n Simple_repeat Simple_repeat 1 64 0 5 1711 286 234 15 30 chrX 147689280 147689346 -18960950 - ID4 SINE ID -13 70 6 5 1711 31 44 0 0 chrX 147689348 147689393 -18960903 + AT_rich Low_complexity Low_complexity 1 45 0 5 1711 289 254 0 56 chrX 147689393 147689464 -18960832 - ID4_ SINE ID -14 69 3 5 1711 416 351 102 81 chrX 147689501 147689786 -18960510 - B4 SINE B4 -1 291 1 5 1711 522 278 21 7 chrX 147689790 147689935 -18960361 - B1F1 SINE Alu 0 149 3 5 1711 2351 69 22 3 chrX 147689969 147690290 -18960006 - L1Md_F2 LINE L1 -1 6566 6240 5 1711 5096 70 18 0 chrX 147690290 147691186 -18959110 - L1Md_F2 LINE L1 -431 6151 5225 5 1711 5834 75 3 0 chrX 147691178 147691948 -18958348 + L1Md_F2 LINE L1 4463 5234 -649 5 1711 268 262 116 45 chrX 147691950 147692007 -18958289 - ID_B1 SINE B4 0 224 171 6 1711 624 190 70 42 chrX 147692007 147692150 -18958146 - B1_Mur4 SINE Alu -2 148 2 6 1711 268 262 116 45 chrX 147692150 147692204 -18958092 - ID_B1 SINE B4 -54 170 105 6 1711 237 265 0 0 chrX 147692218 147692286 -18958010 - L1M3 LINE L1 -1763 4377 4310 6 1711 494 229 0 0 chrX 147692301 147692397 -18957899 - B3A SINE B2 -101 97 2 6 1711 391 320 7 72 chrX 147692416 147692554 -18957742 - B1F SINE Alu -19 130 2 6 1711 352 279 21 14 chrX 147692560 147692702 -18957594 - L1MC LINE L1 -2304 3842 3700 6 1711 273 265 50 25 chrX 147692708 147692828 -18957468 - L1MDa LINE L1 -3535 3002 2880 6 1711 401 215 158 67 chrX 147692892 147693274 -18957022 - L1MDa LINE L1 -3667 2870 2427 6 1711 425 217 87 0 chrX 147693342 147693480 -18956816 - Lx9 LINE L1 -7 7637 7488 6 1711 280 171 137 74 chrX 147693582 147693677 -18956619 - B4 SINE B4 0 292 192 6 1711 860 60 0 0 chrX 147693690 147693806 -18956490 - ORR1A2 LTR MaLR 0 327 212 6 1711 264 306 68 27 chrX 147693949 147694023 -18956273 - ID4_ SINE ID -2 81 5 6 1711 876 249 35 10 chrX 147694099 147694302 -18955994 - ID_B1 SINE B4 -8 216 9 6 1711 2456 42 3 0 chrX 147694302 147694610 -18955686 - L1Md_F2 LINE L1 -1 6581 6273 6 1711 703 215 66 11 chrX 147694732 147694915 -18955381 + B2_Mm2 SINE B2 2 194 -1 6 1711 279 262 165 12 chrX 147694944 147695029 -18955267 - B1F SINE Alu -51 98 1 6 1711 1034 247 95 62 chrX 147695319 147695625 -18954671 + MTE2a LTR MaLR 64 379 0 6 1711 441 226 39 19 chrX 147695986 147696090 -18954206 - MTEa LTR MaLR -4 375 270 6 1711 448 284 85 32 chrX 147696096 147696285 -18954011 - MTE2a LTR MaLR -5 374 176 6 1711 587 168 0 0 chrX 147696296 147696391 -18953905 + URR1A DNA MER1_type 49 143 -83 6 1711 725 82 31 0 chrX 147696467 147696564 -18953732 - U6 snRNA snRNA -7 100 1 6 1711 23 54 0 0 chrX 147696792 147696829 -18953467 + AT_rich Low_complexity Low_complexity 1 37 0 6 1711 239 189 0 22 chrX 147696866 147696920 -18953376 + B1_Mus1 SINE Alu 2 52 -96 6 1711 204 40 0 0 chrX 147697247 147697272 -18953024 + (TA)n Simple_repeat Simple_repeat 2 26 0 6 1711 526 303 75 75 chrX 147697323 147697737 -18952559 - L1ME3 LINE L1 -304 5858 5445 6 1711 433 293 0 39 chrX 147697761 147697864 -18952432 - RSINE1 SINE B4 -19 146 48 6 1711 2239 269 48 32 chrX 147698039 147698724 -18951572 - Lx8 LINE L1 -383 7090 6395 6 1711 723 253 28 17 chrX 147698725 147698902 -18951394 + B4A SINE B4 108 286 -6 6 1711 929 303 206 8 chrX 147699012 147699765 -18950531 - L1MC4 LINE L1 -369 7673 6771 6 1711 1568 45 0 5 chrX 147699903 147700103 -18950193 + L1_Mus1 LINE L1 6369 6567 0 6 1711 218 269 96 0 chrX 147700308 147700360 -18949936 + ID2 SINE ID 25 81 -2 6 1711 593 224 88 15 chrX 147700453 147700589 -18949707 - B1_Mur1 SINE Alu 0 149 4 6 1711 21 36 0 0 chrX 147701004 147701032 -18949264 + AT_rich Low_complexity Low_complexity 1 28 0 6 1711 485 104 0 13 chrX 147701252 147701330 -18948966 + (TTCC)n Simple_repeat Simple_repeat 3 79 0 6 1711 23 33 0 0 chrX 147701688 147701718 -18948578 + AT_rich Low_complexity Low_complexity 1 30 0 6 1711 11158 49 5 3 chrX 147701718 147703782 -18946514 - L1Md_F2 LINE L1 -14 6568 4502 6 1711 327 241 65 12 chrX 147703789 147703957 -18946339 - L1MDb LINE L1 -5143 1397 1221 6 1711 335 254 11 0 chrX 147703958 147704045 -18946251 - ID4_ SINE ID -55 97 10 6 1711 7915 45 10 0 chrX 147704056 147705179 -18945117 - L1Md_F3 LINE L1 -14 6570 5437 6 1711 2046 159 13 70 chrX 147705179 147705565 -18944731 - ORR1B1 LTR MaLR -30 364 1 6 1711 500 233 65 93 chrX 147705650 147705996 -18944300 - L1MDb LINE L1 -5414 1219 903 6 1711 318 386 12 24 chrX 147706225 147706395 -18943901 - L1MDb LINE L1 -6220 320 153 6 1711 778 273 23 46 chrX 147706425 147706644 -18943652 - B3 SINE B2 0 216 3 6 1711 21 36 0 0 chrX 147706978 147707006 -18943290 + AT_rich Low_complexity Low_complexity 1 28 0 6 1711 2641 159 43 45 chrX 147707029 147707581 -18942715 - Lx9 LINE L1 -240 7404 6854 6 1711 21 57 0 0 chrX 147707585 147707620 -18942676 + AT_rich Low_complexity Low_complexity 1 35 0 6 1711 633 84 0 0 chrX 147707772 147707855 -18942441 + Lx2 LINE L1 6561 6643 -354 6 1711 1331 144 9 0 chrX 147707855 147708070 -18942226 + Lx2 LINE L1 6775 6991 -6 6 1711 3872 48 6 16 chrX 147708172 147708662 -18941634 + L1_Mus2 LINE L1 6079 6563 -3 6 1711 527 156 81 6 chrX 147708813 147708974 -18941322 - RMER17C LTR ERVK -135 275 103 6 1711 1083 202 14 9 chrX 147709028 147709243 -18941053 + B3 SINE B2 1 216 0 6 1711 248 264 23 0 chrX 147709254 147709341 -18940955 - L1MB7 LINE L1 -23 6161 6073 6 1711 1160 101 12 17 chrX 147709767 147709939 -18940357 + B2_Mm2 SINE B2 2 172 -23 6 1711 2318 198 11 11 chrX 147710161 147710620 -18939676 - Lx5 LINE L1 0 7050 6592 6 1711 249 180 0 76 chrX 147710620 147710686 -18939610 + L1_Mur2 LINE L1 2050 2110 -3767 6 1711 26 30 0 0 chrX 147710946 147710979 -18939317 + AT_rich Low_complexity Low_complexity 1 33 0 6 1711 842 237 12 102 chrX 147711111 147711355 -18938941 - ID_B1 SINE B4 0 224 3 6 1711 211 263 18 0 chrX 147711555 147711612 -18938684 + T-rich Low_complexity Low_complexity 3 60 0 6 1711 19810 134 9 55 chrX 147711998 147713021 -18937275 - L1_Mus1 LINE L1 -268 6299 5351 6 1711 1997 9 0 0 chrX 147713021 147713251 -18937045 - L1Md_T LINE L1 0 6582 6353 6 213 27761 127 29 28 chrX 147713251 147718544 -18931752 - L1_Mus1 LINE L1 -510 5373 303 6 1712 339 303 196 21 chrX 147722172 147722361 -18927935 + ID_B1 SINE B4 2 223 -1 6 1712 310 338 70 54 chrX 147722365 147722681 -18927615 + Lx8 LINE L1 7151 7471 -2 6 1712 238 341 0 12 chrX 147723110 147723193 -18927103 - ID4 SINE ID 0 83 2 6 1712 238 140 0 20 chrX 147723969 147724020 -18926276 - L1M4 LINE L1 -1781 4365 4316 6 1712 247 137 40 27 chrX 147724032 147724107 -18926189 + CT-rich Low_complexity Low_complexity 1 76 0 6 1712 503 281 0 0 chrX 147724117 147724213 -18926083 - PB1D7 SINE Alu -24 96 1 6 1712 236 200 54 32 chrX 147724214 147724307 -18925989 - L1M4 LINE L1 -1819 4321 4227 6 1712 1060 185 9 44 chrX 147724329 147724555 -18925741 - ORR1A3-int LTR MaLR -1413 550 333 6 1712 345 88 313 26 chrX 147724549 147724664 -18925632 - B2_Mm2 SINE B2 -1 194 47 6 1712 1105 143 17 0 chrX 147724730 147724905 -18925391 - B2_Mm1t SINE B2 -13 180 3 6 1712 2184 108 14 39 chrX 147724907 147725262 -18925034 - ORR1A3-int LTR MaLR -1617 346 1 6 1712 2130 109 45 3 chrX 147725262 147725575 -18924721 - ORR1A3 LTR MaLR 0 326 1 6 1712 503 217 46 19 chrX 147725738 147725846 -18924450 - PB1D9 SINE Alu -9 111 1 6 1712 556 248 85 22 chrX 147726084 147726269 -18924027 - B3 SINE B2 0 216 4 6 1712 43 81 0 0 chrX 147726415 147726514 -18923782 + AT_rich Low_complexity Low_complexity 1 99 0 6 1712 630 287 38 14 chrX 147727266 147727478 -18922818 - ID_B1 SINE B4 -6 218 2 6 1712 292 260 52 0 chrX 147729145 147729222 -18921074 + ID4_ SINE ID 2 82 -1 6 1712 420 20 0 0 chrX 147729481 147729530 -18920766 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1712 531 222 175 0 chrX 147729531 147729657 -18920639 - B3 SINE B2 -68 148 1 6 1712 932 158 118 16 chrX 147730718 147730904 -18919392 - B3 SINE B2 -10 206 2 6 1712 695 223 28 3 chrX 147730920 147731072 -18919224 - B3 SINE B2 -12 183 17 6 1712 474 278 0 42 chrX 147731073 147731193 -18919103 - B1F2 SINE Alu -19 130 16 6 1712 505 310 17 17 chrX 147731458 147731573 -18918723 - ID_B1 SINE B4 -19 205 91 6 1712 384 339 25 8 chrX 147731650 147731769 -18918527 + RSINE1 SINE B4 37 157 -8 6 1712 419 225 0 53 chrX 147731962 147732056 -18918240 - PB1D10 SINE Alu -2 115 27 6 1712 474 183 365 0 chrX 147732173 147732288 -18918008 + B3A SINE B2 1 157 -41 6 1712 309 100 0 0 chrX 147732303 147732353 -18917943 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 1712 394 267 0 22 chrX 147732380 147732472 -18917824 - PB1D7 SINE Alu -2 118 29 6 1712 290 244 114 23 chrX 147732494 147732506 -18917790 + B4 SINE B4 72 91 -201 6 1712 496 194 83 22 chrX 147732506 147732625 -18917671 + B1_Mur2 SINE Alu 1 124 -3 6 1712 26 0 0 0 chrX 147733186 147733212 -18917084 + AT_rich Low_complexity Low_complexity 1 26 0 6 1712 258 270 73 105 chrX 147734371 147734495 -18915801 + MT2B LTR ERVL 155 274 -327 6 1712 669 206 23 8 chrX 147734385 147734517 -18915779 + B1_Mur1 SINE Alu 14 147 -2 6 1712 509 225 0 43 chrX 147734962 147735078 -18915218 + PB1D9 SINE Alu 10 120 0 6 1712 272 260 54 14 chrX 147735221 147735295 -18915001 + PB1D10 SINE Alu 1 77 -40 6 1712 930 194 35 30 chrX 147735389 147735586 -18914710 - B3A SINE B2 0 198 1 6 1712 560 180 13 158 chrX 147735854 147736006 -18914290 + B1_Mur4 SINE Alu 21 150 0 6 1712 421 272 9 9 chrX 147736353 147736468 -18913828 + PB1D10 SINE Alu 3 117 0 6 1712 21 0 0 0 chrX 147736530 147736551 -18913745 + AT_rich Low_complexity Low_complexity 1 21 0 6 1712 801 214 71 6 chrX 147736870 147737039 -18913257 - B3A SINE B2 -18 180 1 6 1712 29 20 0 39 chrX 147737039 147737073 -18913223 + AT_rich Low_complexity Low_complexity 1 33 0 6 1712 708 205 216 6 chrX 147737073 147737240 -18913056 + B3 SINE B2 1 202 -14 6 1712 29 20 0 39 chrX 147737240 147737256 -18913040 + AT_rich Low_complexity Low_complexity 1 16 0 6 1712 850 186 136 16 chrX 147737300 147737491 -18912805 - B3 SINE B2 -2 214 1 6 1712 289 315 42 0 chrX 147737605 147737748 -18912548 + L1_Rod LINE L1 5610 5758 -89 6 1712 245 321 24 36 chrX 147738024 147738108 -18912188 - AluG_3 SINE Alu -86 225 143 6 1712 357 224 0 50 chrX 147738134 147738214 -18912082 - ID4 SINE ID -3 80 5 6 1712 22 0 0 0 chrX 147738482 147738504 -18911792 + AT_rich Low_complexity Low_complexity 1 22 0 7 1712 364 309 164 29 chrX 147738515 147738655 -18911641 - RSINE1 SINE B4 -2 163 5 7 1712 252 243 123 53 chrX 147738686 147738873 -18911423 - L1MDa LINE L1 -3913 2626 2427 7 1712 186 43 0 0 chrX 147738884 147738907 -18911389 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1712 31 0 0 0 chrX 147738959 147738990 -18911306 + AT_rich Low_complexity Low_complexity 1 31 0 7 1712 509 244 107 19 chrX 147739074 147739233 -18911063 - B4A SINE B4 -119 173 1 7 1712 424 250 141 10 chrX 147739233 147739439 -18910857 - L1M4b LINE L1 -4145 3189 2957 7 1712 22 35 0 0 chrX 147740125 147740154 -18910142 + AT_rich Low_complexity Low_complexity 1 29 0 7 1712 290 355 73 0 chrX 147740297 147740421 -18909875 + Lx8 LINE L1 6943 7075 -398 7 1712 281 320 78 84 chrX 147740836 147740908 -18909388 - B4A SINE B4 -46 246 104 7 1712 365 318 0 0 chrX 147740908 147740993 -18909303 - PB1D10 SINE Alu -29 88 4 7 1712 4920 92 82 3 chrX 147741340 147742067 -18908229 - Lx4A LINE L1 -1 7057 6273 7 1712 1043 243 99 13 chrX 147742080 147742149 -18908147 - Lx8 LINE L1 -887 6586 6499 7 1712 1819 155 9 67 chrX 147742149 147742494 -18907802 - ORR1A4 LTR MaLR 0 329 5 7 1712 1043 243 99 13 chrX 147742494 147742737 -18907559 - Lx8 LINE L1 -975 6498 6247 7 1712 351 0 0 0 chrX 147742737 147742776 -18907520 + (TCG)n Simple_repeat Simple_repeat 1 39 0 7 1712 1329 7 0 0 chrX 147742776 147742926 -18907370 + (TTC)n Simple_repeat Simple_repeat 3 152 0 7 1712 351 150 0 0 chrX 147742935 147742995 -18907301 + (TTCTCC)n Simple_repeat Simple_repeat 5 64 0 7 1712 346 170 107 82 chrX 147743002 147743124 -18907172 - Lx8 LINE L1 -1221 6252 6128 7 1712 291 341 47 8 chrX 147743400 147743527 -18906769 - MER94 DNA AcHobo 0 134 3 7 1712 552 224 11 11 chrX 147743563 147743677 -18906619 + RSINE1 SINE B4 5 119 -46 7 1712 405 0 0 0 chrX 147743677 147743722 -18906574 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 1712 369 288 99 14 chrX 147744188 147744329 -18905967 - MER58A DNA MER1_type 0 224 72 7 1712 23 0 0 0 chrX 147744512 147744535 -18905761 + AT_rich Low_complexity Low_complexity 1 23 0 7 1712 5411 68 30 11 chrX 147744937 147745669 -18904627 - L1Md_F2 LINE L1 0 6582 5837 7 1712 328 276 0 22 chrX 147745883 147745972 -18904324 + BC1_Mm scRNA scRNA 8 94 -58 7 1712 376 262 56 0 chrX 147745992 147746099 -18904197 + PB1D10 SINE Alu 5 117 0 7 1712 255 301 182 7 chrX 147746429 147746566 -18903730 + MIRb SINE MIR 58 218 -50 7 1712 192 355 16 0 chrX 147746711 147746773 -18903523 - MIRm SINE MIR -17 259 197 7 1712 620 221 65 8 chrX 147746864 147746987 -18903309 + RSINE1 SINE B4 3 132 -33 7 1712 213 281 15 15 chrX 147746992 147747057 -18903239 - L2b LINE L2 -212 3163 3099 7 1712 1286 261 7 7 chrX 147748014 147748303 -18901993 + B4 SINE B4 2 290 -2 7 1712 692 268 25 25 chrX 147748360 147748521 -18901775 + B3 SINE B2 2 162 -54 7 1712 225 94 0 0 chrX 147748521 147748553 -18901743 + (CATA)n Simple_repeat Simple_repeat 3 34 0 7 1712 597 294 69 21 chrX 147748553 147748579 -18901717 + B3A SINE B2 172 197 -1 7 1712 200 257 0 0 chrX 147748623 147748658 -18901638 - L2b LINE L2 -15 3360 3326 7 1712 276 276 169 57 chrX 147748802 147748979 -18901317 + MIRb SINE MIR 4 200 -68 7 1712 1286 50 1 0 chrX 147748983 147749144 -18901152 + B2_Mm2 SINE B2 2 175 -18 7 1712 324 0 0 0 chrX 147749144 147749180 -18901116 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 7 1712 1092 118 78 11 chrX 147749180 147749198 -18901098 + B2_Mm1t SINE B2 176 193 0 7 1712 274 294 68 18 chrX 147754977 147755101 -18895195 - MIRb SINE MIR -113 163 37 7 1712 837 182 227 0 chrX 147755298 147755474 -18894822 + B3 SINE B2 1 216 0 7 1712 413 314 8 8 chrX 147755671 147755790 -18894506 + PB1 SINE Alu 6 124 -3 7 1712 456 218 0 47 chrX 147755881 147755987 -18894309 + PB1D10 SINE Alu 12 112 -5 7 1712 216 368 28 57 chrX 147755987 147756022 -18894274 + B4 SINE B4 97 233 -59 7 1712 193 117 0 77 chrX 147756318 147756383 -18893913 + (TAA)n Simple_repeat Simple_repeat 1 60 0 7 1712 242 298 27 55 chrX 147756532 147756642 -18893654 - MLT1A1 LTR MaLR -8 400 294 7 1712 240 35 0 0 chrX 147756686 147756715 -18893581 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1712 236 281 98 33 chrX 147756831 147756923 -18893373 - MLT1A1 LTR MaLR -266 142 45 7 1712 518 234 0 18 chrX 147756930 147757039 -18893257 + PB1D9 SINE Alu 14 120 0 7 1712 590 223 18 0 chrX 147757050 147757162 -18893134 + PB1D9 SINE Alu 2 115 -5 7 1712 453 305 101 72 chrX 147757181 147757587 -18892709 - MLT-int LTR MaLR -21 1714 1339 7 1712 488 350 37 99 chrX 147757845 147758118 -18892178 - MLT-int LTR MaLR -833 902 647 7 1712 331 305 0 0 chrX 147758132 147758227 -18892069 - PB1D9 SINE Alu -4 116 22 7 1712 439 230 133 33 chrX 147758225 147758381 -18891915 - ID_B1 SINE B4 -41 251 80 7 1712 351 0 0 0 chrX 147758386 147758425 -18891871 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 1712 405 0 0 0 chrX 147758425 147758469 -18891827 + (GA)n Simple_repeat Simple_repeat 1 45 0 7 1712 453 302 81 12 chrX 147758494 147758655 -18891641 - B4A SINE B4 -4 288 117 7 1712 1449 171 84 42 chrX 147758724 147759083 -18891213 - ORR1D1 LTR MaLR 0 374 1 7 1712 271 337 0 12 chrX 147759094 147759178 -18891118 - ID_B1 SINE B4 -57 167 85 7 1712 1326 126 43 22 chrX 147759423 147759729 -18890567 - ORR1B1 LTR MaLR -6 388 1 7 1712 457 270 84 38 chrX 147759772 147759789 -18890507 - B3 SINE B2 -4 212 199 7 1712 405 0 0 0 chrX 147759789 147759834 -18890462 + (TTTTA)n Simple_repeat Simple_repeat 5 49 0 7 1712 457 270 84 38 chrX 147759834 147759947 -18890349 - B3 SINE B2 -18 198 76 7 1712 511 332 68 0 chrX 147759971 147760191 -18890105 - MLT-int LTR MaLR -1487 248 14 7 1712 358 254 0 41 chrX 147760277 147760400 -18889896 + Lx8 LINE L1 7353 7470 -3 7 1712 940 122 0 0 chrX 147760442 147760581 -18889715 + B1_Mus2 SINE Alu 9 147 0 7 1712 204 125 0 0 chrX 147760581 147760613 -18889683 + (TAA)n Simple_repeat Simple_repeat 1 32 0 7 1712 570 259 38 0 chrX 147760662 147760847 -18889449 - MER34B-int LTR ERV1 -801 4555 4364 7 1712 270 0 0 26 chrX 147760853 147760892 -18889404 + B3 SINE B2 1 38 -178 7 1712 21 0 0 0 chrX 147760952 147760973 -18889323 + AT_rich Low_complexity Low_complexity 1 21 0 7 1712 417 231 129 57 chrX 147761013 147761137 -18889159 + B1_Mur2 SINE Alu 1 133 -16 7 1712 265 185 57 129 chrX 147761212 147761336 -18888960 - PB1D7 SINE Alu -1 119 5 7 1712 593 160 101 31 chrX 147761405 147761534 -18888762 + B1_Mus1 SINE Alu 1 138 -10 7 1712 319 194 14 29 chrX 147761535 147761587 -18888709 + B1_Mur4 SINE Alu 77 128 -22 7 1712 279 0 0 0 chrX 147761587 147761618 -18888678 + (GA)n Simple_repeat Simple_repeat 1 31 0 7 1712 319 194 14 29 chrX 147761618 147761634 -18888662 + B1_Mur4 SINE Alu 129 144 -6 7 1712 312 215 15 0 chrX 147761658 147761723 -18888573 - MER34B-int LTR ERV1 -932 4004 3939 7 1712 225 200 20 0 chrX 147761769 147761819 -18888477 - B4 SINE B4 -238 54 4 7 1712 481 217 118 29 chrX 147761862 147762066 -18888230 - MER34B-int LTR ERV1 -1214 3722 3501 7 1712 271 250 25 0 chrX 147762465 147762545 -18887751 - MER34B-int LTR ERV1 -1991 2945 2864 7 1712 784 279 28 11 chrX 147762557 147762738 -18887558 + ID_B1 SINE B4 5 188 -36 7 1712 344 167 33 0 chrX 147762873 147762933 -18887363 + B1F SINE Alu 68 129 -20 7 1712 1404 163 33 82 chrX 147762904 147763252 -18887044 - ORR1C1 LTR MaLR -41 329 1 7 1712 337 259 4 160 chrX 147763281 147763298 -18886998 + B1F SINE Alu 2 56 -61 7 1712 418 187 10 108 chrX 147763298 147763400 -18886896 + ID_B1 SINE B4 100 191 -33 7 1712 337 259 4 160 chrX 147763400 147763416 -18886880 + B1F SINE Alu 57 116 -1 7 1712 282 213 0 0 chrX 147763482 147763529 -18886767 + B1F SINE Alu 1 47 -102 7 1712 1556 44 12 6 chrX 147763504 147763706 -18886590 + MT2_Mm LTR ERVL 314 533 0 7 1712 1814 27 5 0 chrX 147763729 147763949 -18886347 + ORR1A0 LTR MaLR 126 346 0 7 1712 307 212 86 12 chrX 147763956 147764037 -18886259 + PB1D7 SINE Alu 34 120 0 7 1712 887 252 30 5 chrX 147764041 147764244 -18886052 + B3 SINE B2 1 208 -8 7 1712 840 237 61 24 chrX 147764316 147764528 -18885768 + ID_B1 SINE B4 2 221 -3 7 1712 330 259 74 0 chrX 147764582 147764663 -18885633 - RMER5 LTR ERV1 -17 517 431 7 1712 209 161 0 0 chrX 147764716 147764747 -18885549 + G-rich Low_complexity Low_complexity 5 35 0 7 1712 241 344 0 119 chrX 147764821 147764930 -18885366 - PB1D10 SINE Alu -5 112 17 7 1712 299 302 38 0 chrX 147764966 147765072 -18885224 - RMER5 LTR ERV1 -267 267 158 7 1712 442 242 66 8 chrX 147765106 147765227 -18885069 - RMER5 LTR ERV1 -362 172 45 7 1712 225 288 68 91 chrX 147765337 147765425 -18884871 + B4A SINE B4 33 118 -174 7 1712 264 30 0 0 chrX 147765526 147765559 -18884737 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1712 864 136 20 33 chrX 147765829 147765981 -18884315 - B1_Mur4 SINE Alu 0 150 1 7 1712 631 37 0 0 chrX 147766067 147766148 -18884148 + B1_Mur4 SINE Alu 70 150 0 7 1712 850 187 205 0 chrX 147766330 147766501 -18883795 + B3 SINE B2 1 206 -10 7 1712 190 75 24 48 chrX 147766568 147766610 -18883686 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 7 1712 198 0 0 0 chrX 147766612 147766634 -18883662 + (CA)n Simple_repeat Simple_repeat 2 23 0 7 1712 734 167 0 9 chrX 147766639 147766754 -18883542 + B1_Mus1 SINE Alu 22 135 -13 7 1712 21 57 0 0 chrX 147766771 147766806 -18883490 + AT_rich Low_complexity Low_complexity 1 35 0 7 1712 827 242 38 14 chrX 147767037 147767247 -18883049 - ID_B1 SINE B4 -9 215 1 7 1712 231 36 0 0 chrX 147767389 147767417 -18882879 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 7 1712 1183 50 0 0 chrX 147767420 147767560 -18882736 - B1_Mus2 SINE Alu -6 141 2 7 1712 314 207 40 73 chrX 147767966 147768143 -18882153 - MER31-int LTR ERV1 -4331 605 435 7 1712 269 266 80 72 chrX 147768303 147768441 -18881855 + B1F SINE Alu 4 142 -7 7 1712 387 0 0 0 chrX 147768736 147768779 -18881517 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 7 1712 686 208 69 0 chrX 147768875 147769005 -18881291 - B1_Mur1 SINE Alu -10 139 1 7 1712 714 212 0 0 chrX 147769080 147769198 -18881098 - B3 SINE B2 -90 126 9 8 1712 500 215 47 94 chrX 147769378 147769527 -18880769 - LTR48 LTR ERV1 -643 144 3 8 1712 653 239 0 0 chrX 147770039 147770181 -18880115 + B1F SINE Alu 1 142 -7 8 1712 183 80 0 0 chrX 147770181 147770206 -18880090 + (GAAA)n Simple_repeat Simple_repeat 1 25 0 8 1712 1411 179 42 133 chrX 147770264 147770618 -18879678 + RLTR24 LTR ERV1 135 456 -73 8 1712 339 363 12 31 chrX 147770643 147770805 -18879491 + B4A SINE B4 20 178 -114 8 1712 343 267 28 127 chrX 147770805 147770853 -18879443 + B3A SINE B2 20 203 -13 8 1712 327 299 0 9 chrX 147770853 147770961 -18879335 + (CA)n Simple_repeat Simple_repeat 1 107 0 8 1712 336 242 21 10 chrX 147770961 147771057 -18879239 + HAL1-3A_ME LINE L1 1976 2072 -786 8 1712 1922 111 160 6 chrX 147771602 147771920 -18878376 + ORR1B2 LTR MaLR 1 367 0 8 1712 271 206 0 149 chrX 147772170 147772244 -18878052 - RSINE1 SINE B4 -19 146 84 8 1712 275 369 72 0 chrX 147773536 147773647 -18876649 - MIRb SINE MIR -114 154 36 8 1712 279 308 26 0 chrX 147774514 147774592 -18875704 + MER67B LTR ERV1 31 110 -551 8 1712 1419 254 87 22 chrX 147774669 147775083 -18875213 + MER67B LTR ERV1 221 661 0 8 1712 315 261 0 0 chrX 147775370 147775435 -18874861 - ID4 SINE ID 0 83 19 8 1712 211 212 254 15 chrX 147775824 147775891 -18874405 - ID2 SINE ID 0 83 1 8 1712 1216 261 0 43 chrX 147776470 147776774 -18873522 - B4 SINE B4 0 292 2 8 1712 409 305 101 39 chrX 147776872 147777031 -18873265 - B1F SINE Alu 0 147 1 8 1712 500 318 32 0 chrX 147777062 147777188 -18873108 - B1F1 SINE Alu -14 135 6 8 1712 341 186 0 40 chrX 147777340 147777441 -18872855 - L1Md_F3 LINE L1 0 6584 6488 8 1712 217 333 0 0 chrX 147778621 147778699 -18871597 + C-rich Low_complexity Low_complexity 1 78 0 8 1712 328 179 47 82 chrX 147780828 147780913 -18869383 + ID4_ SINE ID 2 83 0 8 1712 520 293 75 45 chrX 147781220 147781420 -18868876 - MIR SINE MIR -49 213 8 8 1712 616 248 7 28 chrX 147782014 147782159 -18868137 - ID_B1 SINE B4 0 224 83 8 1712 389 259 11 23 chrX 147782205 147782292 -18868004 + PB1 SINE Alu 17 102 -25 8 1712 319 294 15 0 chrX 147782498 147782566 -18867730 + B3A SINE B2 88 156 -42 8 1712 249 288 235 29 chrX 147783530 147783666 -18866630 - MIRb SINE MIR 0 268 105 8 1712 210 26 50 25 chrX 147783721 147783761 -18866535 + (CAAAC)n Simple_repeat Simple_repeat 4 44 0 8 1712 516 246 123 0 chrX 147784406 147784544 -18865752 - RSINE1 SINE B4 0 165 11 8 1712 383 262 138 18 chrX 147784623 147784732 -18865564 - RSINE1 SINE B4 0 165 44 8 1712 38 61 0 0 chrX 147785126 147785192 -18865104 + AT_rich Low_complexity Low_complexity 1 66 0 8 1712 720 263 57 70 chrX 147785192 147785593 -18864703 - L1MA4 LINE L1 -374 5926 5531 8 1712 333 47 0 0 chrX 147785604 147785647 -18864649 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 1712 228 241 18 36 chrX 147785649 147785705 -18864591 - ID_B1 SINE B4 -26 198 144 8 1712 595 252 64 13 chrX 147785727 147785884 -18864412 - ID_B1 SINE B4 -45 179 15 8 1712 740 186 20 52 chrX 147786020 147786173 -18864123 - B1F2 SINE Alu -1 148 1 8 1712 1721 264 114 45 chrX 147786179 147787072 -18863224 - L1MA4 LINE L1 -390 5457 4520 8 1712 360 0 0 0 chrX 147787074 147787114 -18863182 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 1712 633 219 68 0 chrX 147787140 147787272 -18863024 - RSINE1 SINE B4 -2 163 21 8 1712 353 238 75 0 chrX 147787278 147787358 -18862938 - RSINE1 SINE B4 -41 124 39 8 1712 1207 237 125 36 chrX 147787441 147787917 -18862379 - L1MA4 LINE L1 -1616 4527 4012 8 1712 1924 127 239 3 chrX 147787939 147788286 -18862010 - Lx2B LINE L1 -85 6915 6487 8 1712 699 196 72 130 chrX 147788306 147788514 -18861782 - L1MA4 LINE L1 -2162 3978 3777 8 1712 908 161 46 0 chrX 147788514 147788644 -18861652 - B1_Mur2 SINE Alu -13 136 1 8 1712 699 196 72 130 chrX 147788644 147788711 -18861585 - L1MA4 LINE L1 -2364 3776 3719 8 1712 603 168 141 23 chrX 147788716 147788844 -18861452 + B1_Mur3 SINE Alu 7 149 0 8 1712 183 100 0 0 chrX 147788844 147788874 -18861422 + (A)n Simple_repeat Simple_repeat 1 30 0 8 1712 610 279 61 43 chrX 147788876 147789047 -18861249 - L1MA4 LINE L1 -2414 3729 3549 8 1712 1004 128 94 50 chrX 147789047 147789228 -18861068 + B2_Mm2 SINE B2 1 189 -6 8 1712 610 279 61 43 chrX 147789228 147789333 -18860963 - L1MA4 LINE L1 -2595 3548 3448 8 1712 268 267 0 48 chrX 147789433 147789496 -18860800 - RSINE1 SINE B4 0 165 106 8 1712 336 302 28 19 chrX 147789623 147789731 -18860565 + B1F SINE Alu 19 127 -22 8 1712 1113 64 76 6 chrX 147789731 147789888 -18860408 + Lx LINE L1 6278 6445 -209 8 1712 313 270 47 16 chrX 147789903 147790031 -18860265 - L1MA4 LINE L1 -3271 2872 2741 8 1712 788 149 36 43 chrX 147790033 147790173 -18860123 - B1_Mur4 SINE Alu -11 139 1 8 1712 610 219 7 99 chrX 147790297 147790449 -18859847 + RSINE1 SINE B4 28 165 0 8 1712 28 0 0 0 chrX 147790476 147790504 -18859792 + AT_rich Low_complexity Low_complexity 1 28 0 8 1712 996 79 29 0 chrX 147790611 147790751 -18859545 + B2_Mm2 SINE B2 47 190 -5 8 1712 1214 68 0 13 chrX 147790806 147790944 -18859352 + B1_Mus2 SINE Alu 1 138 -9 8 1712 210 37 0 0 chrX 147790944 147790971 -18859325 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 1712 744 51 0 0 chrX 147791122 147791220 -18859076 - L1Md_F2 LINE L1 -11 6571 6474 8 1712 431 258 74 22 chrX 147791922 147792057 -18858239 - B1F SINE Alu -5 144 3 8 1712 658 201 203 44 chrX 147792133 147792229 -18858067 + B3 SINE B2 4 127 -89 8 1712 1159 249 86 100 chrX 147792229 147792741 -18857555 - RLTR16 LTR ERVK 0 505 1 8 1712 658 201 203 44 chrX 147792741 147792826 -18857470 + B3 SINE B2 128 214 -2 8 1712 1077 126 7 0 chrX 147793249 147793392 -18856904 - B1_Mur2 SINE Alu -5 144 1 8 1712 640 255 25 38 chrX 147793415 147793574 -18856722 - RSINE1 SINE B4 0 165 9 8 1712 196 297 15 45 chrX 147793693 147793760 -18856536 - L2b LINE L2 -5 3370 3306 8 1712 261 0 0 0 chrX 147793853 147793882 -18856414 + (T)n Simple_repeat Simple_repeat 1 29 0 8 1712 888 112 21 0 chrX 147794366 147794509 -18855787 - URR1A DNA MER1_type 0 226 81 8 1712 921 299 140 91 chrX 147794662 147795170 -18855126 + MLT1F2 LTR MaLR 22 554 -6 8 1712 490 250 71 0 chrX 147795374 147795486 -18854810 + PB1D7 SINE Alu 1 120 0 8 1712 670 329 156 18 chrX 147795540 147795989 -18854307 + Charlie8 DNA MER1_type 434 944 -1484 8 1712 266 235 110 0 chrX 147796019 147796093 -18854203 + MER5A DNA MER1_type 2 82 -107 8 1712 280 304 96 48 chrX 147796086 147796252 -18854044 + MLT1E3 LTR MaLR 319 492 -132 8 1712 655 100 63 9 chrX 147796326 147796437 -18853859 + B1_Mur4 SINE Alu 34 150 0 8 1712 283 258 16 0 chrX 147796464 147796526 -18853770 + ID_B1 SINE B4 79 141 -83 8 1712 380 262 114 38 chrX 147796475 147796593 -18853703 + B1F1 SINE Alu 9 138 -11 8 1712 1854 66 28 28 chrX 147796593 147796843 -18853453 + L1_Mus2 LINE L1 6315 6564 -2 8 1712 380 262 114 38 chrX 147796843 147796855 -18853441 + B1F1 SINE Alu 139 149 0 8 1712 251 362 0 0 chrX 147796948 147797006 -18853290 + B4 SINE B4 87 144 -148 8 1712 635 213 21 29 chrX 147796994 147797134 -18853162 - B3 SINE B2 -75 141 3 8 1712 842 155 14 40 chrX 147797286 147797434 -18852862 - B1_Mur2 SINE Alu 0 149 6 8 1712 336 231 0 181 chrX 147797331 147797458 -18852838 - MT2B LTR ERVL -344 257 154 8 1712 564 212 53 0 chrX 147797464 147797577 -18852719 - PB1D9 SINE Alu 0 120 2 8 1712 540 30 0 0 chrX 147797609 147797675 -18852621 + (TG)n Simple_repeat Simple_repeat 1 66 0 8 1712 665 252 20 7 chrX 147797675 147797827 -18852469 - B3A SINE B2 -44 154 1 8 1712 847 288 19 9 chrX 147797852 147798066 -18852230 - B3 SINE B2 0 216 1 8 1712 251 317 95 24 chrX 147798130 147798256 -18852040 + Charlie8 DNA MER1_type 2278 2412 -16 8 1712 1178 124 144 45 chrX 147798284 147798486 -18851810 - URR1A DNA MER1_type 0 226 5 8 1712 240 200 20 0 chrX 147798539 147798589 -18851707 - RMER15 LTR ERVL -524 51 1 8 1712 192 277 0 21 chrX 147798800 147798848 -18851448 + MIR SINE MIR 56 102 -160 8 1712 339 271 141 0 chrX 147798949 147799034 -18851262 - B1F1 SINE Alu -52 97 1 8 1712 184 184 180 20 chrX 147799088 147799138 -18851158 + L2a LINE L2 3307 3364 -62 8 1712 712 219 7 33 chrX 147799848 147799999 -18850297 - B1_Mur2 SINE Alu -1 148 2 8 1712 1271 221 62 34 chrX 147800307 147800631 -18849665 - RLTR14 LTR ERV1 -49 333 1 8 1712 251 28 28 0 chrX 147801240 147801276 -18849020 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 1712 637 281 0 25 chrX 147801289 147801446 -18848850 - RSINE1 SINE B4 -10 155 3 8 1712 226 342 13 0 chrX 147801626 147801705 -18848591 - ID4 SINE ID -2 81 2 8 1712 293 226 0 12 chrX 147801706 147801791 -18848505 + CT-rich Low_complexity Low_complexity 1 84 0 8 1712 299 224 0 0 chrX 147801791 147801849 -18848447 - B1F SINE Alu -91 58 1 8 1712 786 208 20 20 chrX 147801880 147802027 -18848269 - B1_Mur1 SINE Alu -1 148 2 8 1712 321 26 0 0 chrX 147802027 147802065 -18848231 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 8 1712 308 307 69 10 chrX 147802072 147802174 -18848122 - B1F SINE Alu -21 128 21 8 1712 296 339 40 32 chrX 147802081 147802206 -18848090 - ID_B1 SINE B4 -27 197 72 8 1712 261 0 0 0 chrX 147802206 147802235 -18848061 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 1712 438 196 0 0 chrX 147802259 147802351 -18847945 + (TA)n Simple_repeat Simple_repeat 1 92 0 8 1712 952 275 137 25 chrX 147802456 147802561 -18847735 - L1MA4 LINE L1 -398 5902 5792 8 1712 270 0 0 0 chrX 147802561 147802591 -18847705 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 1712 952 275 137 25 chrX 147802591 147802929 -18847367 - L1MA4 LINE L1 -509 5791 5409 8 1712 1319 265 129 7 chrX 147802931 147803538 -18846758 + L1MB2 LINE L1 5491 6171 0 8 1712 795 203 39 13 chrX 147803604 147803759 -18846537 + B3 SINE B2 52 210 -6 8 1712 445 269 72 36 chrX 147803970 147804109 -18846187 - B1F1 SINE Alu -3 146 3 9 1712 1032 259 86 82 chrX 147804196 147804484 -18845812 - L1MB7 LINE L1 -21 6163 5850 9 1712 343 319 35 0 chrX 147804484 147804597 -18845699 - PB1D10 SINE Alu 0 117 1 9 1712 1032 259 86 82 chrX 147804597 147804818 -18845478 - L1MB7 LINE L1 -335 5849 5652 9 1712 460 188 62 0 chrX 147804825 147804937 -18845359 - Lx5 LINE L1 0 7050 6932 9 1712 401 269 59 7 chrX 147804941 147805076 -18845220 - L1M3 LINE L1 -495 5685 5544 9 1712 539 277 0 0 chrX 147805126 147805245 -18845051 - ID_B1 SINE B4 -6 218 100 9 1712 468 256 78 0 chrX 147805265 147805355 -18844941 - PB1D10 SINE Alu -20 97 1 9 1712 361 267 99 0 chrX 147805355 147805456 -18844840 - L1M3 LINE L1 -648 5530 5420 9 1712 1075 311 30 11 chrX 147805475 147805839 -18844457 + Lx9 LINE L1 7060 7430 -214 9 1712 263 319 0 14 chrX 147805904 147805974 -18844322 + Tigger7 DNA MER2_type 2400 2468 -23 9 1712 273 254 111 96 chrX 147805952 147806087 -18844209 + MT2B LTR ERVL 128 264 -337 9 1712 624 137 11 0 chrX 147806021 147806116 -18844180 + B1_Mus2 SINE Alu 47 142 -5 9 1712 1535 295 57 30 chrX 147806119 147806733 -18843563 + Lx5 LINE L1 6479 7050 0 9 1712 741 235 96 15 chrX 147807148 147807347 -18842949 + B3 SINE B2 2 216 0 9 1712 401 302 85 23 chrX 147807459 147807588 -18842708 + RSINE1 SINE B4 2 138 -27 9 1712 574 148 130 8 chrX 147808129 147808252 -18842044 - B1_Mus2 SINE Alu -1 146 9 9 1712 201 147 0 0 chrX 147808278 147808312 -18841984 + (CCA)n Simple_repeat Simple_repeat 3 36 0 9 1712 223 214 24 0 chrX 147808441 147808483 -18841813 + PB1 SINE Alu 78 120 -7 9 1712 450 316 0 17 chrX 147808563 147808679 -18841617 + PB1 SINE Alu 3 116 -11 9 1712 238 370 17 8 chrX 147808805 147808925 -18841371 + MIRb SINE MIR 64 184 -84 9 1712 757 210 14 7 chrX 147809319 147809458 -18840838 + B1_Mur2 SINE Alu 1 140 -9 9 1712 1232 50 0 0 chrX 147809469 147809610 -18840686 + B1_Mus1 SINE Alu 2 142 -6 9 1712 585 52 0 0 chrX 147809610 147809687 -18840609 + (GGA)n Simple_repeat Simple_repeat 3 79 0 9 1712 1202 128 35 0 chrX 147809702 147809874 -18840422 + B2_Mm1t SINE B2 2 179 -14 9 1712 301 98 394 19 chrX 147809997 147810101 -18840195 + B2_Mm2 SINE B2 47 189 -6 9 1712 458 325 33 0 chrX 147810695 147810815 -18839481 + B3A SINE B2 51 174 -24 9 1712 333 68 0 0 chrX 147810830 147810874 -18839422 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 9 1712 748 278 50 0 chrX 147811657 147811837 -18838459 + ID_B1 SINE B4 3 191 -33 9 1712 385 246 8 98 chrX 147811737 147811859 -18838437 + PB1D10 SINE Alu 5 115 -2 9 1712 213 39 0 0 chrX 147812160 147812186 -18838110 + (TTG)n Simple_repeat Simple_repeat 2 27 0 9 1712 340 312 37 0 chrX 147812308 147812417 -18837879 - PB1D9 SINE Alu -7 113 1 9 1712 210 347 47 55 chrX 147812598 147812726 -18837570 + MIRb SINE MIR 95 221 -47 9 1712 417 278 111 15 chrX 147812793 147812928 -18837368 + MIRm SINE MIR 19 166 -110 9 1712 10691 103 1 101 chrX 147813003 147814049 -18836247 + L1_Mus1 LINE L1 4258 5123 -760 9 1712 5402 60 6 6 chrX 147814049 147814706 -18835590 + L1Md_F2 LINE L1 5926 6582 0 9 1712 10691 70 1 33 chrX 147814706 147816149 -18834147 + L1_Mus1 LINE L1 5124 6566 -1 9 1712 745 224 0 26 chrX 147816188 147816339 -18833957 + B1_Mur1 SINE Alu 3 149 0 9 1712 1257 231 105 17 chrX 147816626 147816987 -18833309 - Lx9 LINE L1 -7 7637 7245 9 1712 7976 62 0 1 chrX 147817016 147818136 -18832160 - L1_Mus1 LINE L1 -2 6565 5446 9 1712 4806 85 6 0 chrX 147818164 147818812 -18831484 - Lx3_Mus LINE L1 -8 7001 6350 9 1712 1105 91 206 5 chrX 147818822 147819021 -18831275 - Lx3_Mus LINE L1 -799 6210 5972 9 1712 701 243 101 0 chrX 147819036 147819184 -18831112 + U1 snRNA snRNA 1 163 -2 9 1712 251 294 86 33 chrX 147819270 147819421 -18830875 + L1M5 LINE L1 5294 5452 -672 9 1712 548 327 98 41 chrX 147819512 147819844 -18830452 + L2a LINE L2 1395 1747 -1672 9 1712 402 21 0 0 chrX 147819844 147819891 -18830405 + (TC)n Simple_repeat Simple_repeat 2 48 0 9 1712 548 327 98 41 chrX 147819891 147819925 -18830371 + L2a LINE L2 1748 1781 -1638 9 1712 1193 183 15 0 chrX 147819970 147820172 -18830124 - B3 SINE B2 -6 210 6 9 1712 240 332 65 17 chrX 147820208 147820308 -18829988 - B1F2 SINE Alu -9 108 1 9 1712 387 0 0 0 chrX 147820342 147820385 -18829911 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 1712 326 390 24 8 chrX 147820386 147820510 -18829786 - B4A SINE B4 -166 126 1 9 1712 894 252 48 72 chrX 147820549 147820840 -18829456 + B4 SINE B4 1 284 -8 9 1712 218 180 16 0 chrX 147820840 147820901 -18829395 + GA-rich Low_complexity Low_complexity 2 63 0 9 1712 201 74 0 0 chrX 147821179 147821206 -18829090 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 9 1712 354 358 7 0 chrX 147821279 147821416 -18828880 + MLT2B3 LTR ERVL 3 140 -414 9 1712 271 260 0 94 chrX 147821448 147821533 -18828763 - MLT2B1 LTR ERVL -263 257 181 9 1712 878 278 23 69 chrX 147821676 147821981 -18828315 + B4 SINE B4 1 291 -1 9 1712 367 278 0 0 chrX 147822044 147822116 -18828180 - ID4_ SINE ID -8 75 4 9 1712 21 57 0 0 chrX 147822266 147822301 -18827995 + AT_rich Low_complexity Low_complexity 1 35 0 9 1712 183 277 76 15 chrX 147822333 147822399 -18827897 + L2a LINE L2 2803 2872 -547 9 1712 336 304 93 20 chrX 147822418 147822569 -18827727 + L2a LINE L2 3014 3175 -251 9 1712 8238 47 1 47 chrX 147822613 147824152 -18826144 - L1Md_F2 LINE L1 -1 6581 5146 9 1712 36216 61 13 29 chrX 147824132 147830590 -18819706 - L1Md_F3 LINE L1 0 6584 233 9 1712 9660 62 0 7 chrX 147830600 147831829 -18818467 - L1Md_F2 LINE L1 -705 5178 3959 9 1712 360 64 0 0 chrX 147831874 147831921 -18818375 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 1712 669 282 7 7 chrX 147831922 147832072 -18818224 - RSINE1 SINE B4 -11 154 5 9 1712 21 0 0 0 chrX 147832174 147832195 -18818101 + AT_rich Low_complexity Low_complexity 1 21 0 9 1712 241 346 26 80 chrX 147832227 147832340 -18817956 - B4A SINE B4 0 292 186 9 1712 815 243 13 0 chrX 147833700 147833852 -18816444 + RSINE1 SINE B4 10 163 -2 9 1712 647 296 0 12 chrX 147834410 147834574 -18815722 - RSINE1 SINE B4 0 165 4 9 1712 529 264 160 0 chrX 147834969 147835094 -18815202 - RSINE1 SINE B4 -14 151 7 9 1712 405 262 106 61 chrX 147835358 147835622 -18814674 - L1ME1 LINE L1 -60 6119 5844 9 1712 593 271 108 86 chrX 147835622 147835808 -18814488 + B3A SINE B2 2 191 -4 9 1712 234 0 0 0 chrX 147835838 147835864 -18814432 + (TG)n Simple_repeat Simple_repeat 2 27 0 9 1712 656 296 8 4 chrX 147835865 147836106 -18814190 - L1MC LINE L1 -2195 5800 5559 9 1712 439 246 73 48 chrX 147836150 147836169 -18814127 - RSINE1 SINE B4 -10 155 138 9 1712 303 28 0 0 chrX 147836169 147836205 -18814091 + (TG)n Simple_repeat Simple_repeat 2 37 0 9 1712 439 246 73 48 chrX 147836205 147836309 -18813987 - RSINE1 SINE B4 -28 137 29 9 1712 666 235 44 0 chrX 147836436 147836572 -18813724 - B1F2 SINE Alu -1 148 7 9 1712 281 348 34 75 chrX 147836441 147836587 -18813709 - B4 SINE B4 -72 220 81 9 1712 472 247 0 0 chrX 147836611 147836700 -18813596 - B4 SINE B4 -201 91 3 9 1712 440 293 62 38 chrX 147836700 147837012 -18813284 - L1MC LINE L1 -1098 5048 4721 9 1712 1198 126 16 21 chrX 147837022 147837209 -18813087 - B2_Mm2 SINE B2 -1 194 9 9 1712 213 182 10 214 chrX 147837138 147837236 -18813060 - ID SINE ID -146 78 1 9 1712 352 107 0 0 chrX 147837263 147837319 -18812977 - L1MC LINE L1 -1475 4671 4616 9 1712 847 163 0 12 chrX 147837325 147837493 -18812803 + GA-rich Low_complexity Low_complexity 2 167 0 9 1712 368 333 96 7 chrX 147837644 147837780 -18812516 - B1F1 SINE Alu -1 148 1 9 1712 253 338 0 56 chrX 147837930 147838002 -18812294 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 9 1712 266 301 116 9 chrX 147838110 147838449 -18811847 - L1MEf LINE L1 -1810 4727 4349 9 1712 331 290 0 0 chrX 147838530 147838599 -18811697 - B4A SINE B4 -8 284 216 9 1712 280 247 147 49 chrX 147838593 147838695 -18811601 - B3A SINE B2 0 216 105 9 1712 219 323 79 20 chrX 147838747 147838848 -18811448 - B3 SINE B2 -24 192 86 9 1712 1170 68 7 0 chrX 147838860 147839006 -18811290 + B1_Mm SINE Alu 1 147 0 9 1712 224 129 0 46 chrX 147839007 147839072 -18811224 + A-rich Low_complexity Low_complexity 1 62 0 9 1712 410 195 0 13 chrX 147839081 147839159 -18811137 - B2_Mm2 SINE B2 -116 79 3 9 1712 853 304 65 0 chrX 147839199 147839416 -18810880 - B4A SINE B4 -59 233 3 9 1712 613 241 14 21 chrX 147839728 147839868 -18810428 - B1_Mur2 SINE Alu -10 139 1 9 1712 413 326 75 15 chrX 147839902 147840036 -18810260 - RSINE1 SINE B4 0 165 24 9 1712 1189 232 23 26 chrX 147840066 147840331 -18809965 + MTEb LTR MaLR 113 376 -3 9 1712 483 342 26 0 chrX 147840354 147840509 -18809787 + RSINE1 SINE B4 2 160 -5 9 1712 393 234 56 16 chrX 147840557 147840743 -18809553 - L1MEf LINE L1 -4903 1730 1530 9 1712 1237 246 7 10 chrX 147840753 147841044 -18809252 - B4A SINE B4 0 292 3 9 1712 23 0 0 0 chrX 147841156 147841179 -18809117 + AT_rich Low_complexity Low_complexity 1 23 0 9 1712 4111 193 145 11 chrX 147841179 147842122 -18808174 - Lx9 LINE L1 -227 7417 6348 9 1712 369 0 0 0 chrX 147842131 147842172 -18808124 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 1712 629 98 0 9 chrX 147842172 147842285 -18808011 + (GA)n Simple_repeat Simple_repeat 1 112 0 9 1712 727 139 220 58 chrX 147842390 147842581 -18807715 - L1_Rod LINE L1 -17 5830 5609 9 1712 760 143 21 79 chrX 147842608 147842798 -18807498 - L1_Rod LINE L1 -646 5201 5023 9 1712 3988 165 29 134 chrX 147842798 147843834 -18806462 - RLTR25A LTR ERVK 0 1103 177 9 1712 1162 244 116 26 chrX 147843834 147844409 -18805887 - RLTR11A LTR ERVK 0 528 2 9 1712 716 227 69 6 chrX 147844409 147844580 -18805716 - RLTR25A LTR ERVK -846 182 1 9 1712 1806 214 83 66 chrX 147844581 147845087 -18805209 - L1_Rod LINE L1 -1096 5047 4522 9 1712 662 122 9 36 chrX 147845087 147845198 -18805098 - B1_Mur4 SINE Alu -1 149 42 9 1712 1806 214 83 66 chrX 147845198 147845709 -18804587 - L1_Rod LINE L1 -1096 4521 3989 9 1712 623 61 0 0 chrX 147845712 147845794 -18804502 + BGLII LTR ERVK 1 82 -339 9 1712 1181 199 51 93 chrX 147845835 147845880 -18804416 - L1_Rod LINE L1 -2787 3060 3020 9 1712 743 231 0 0 chrX 147845880 147846027 -18804269 - B1_Mur3 SINE Alu -2 147 1 9 1712 1181 199 51 93 chrX 147846027 147846431 -18803865 - L1_Rod LINE L1 -2828 3019 2630 9 1712 2044 126 155 0 chrX 147846434 147846775 -18803521 - ORR1B1 LTR MaLR 0 394 1 1 1712 6223 142 65 78 chrX 147846775 147848073 -18802223 - ORR1B1-int LTR MaLR 0 1963 615 1 26 3621 161 67 24 chrX 147849153 147849873 -18800423 - ORR1B1-int LTR MaLR -1212 751 1 1 1713 1602 145 209 6 chrX 147849875 147850201 -18800095 - ORR1B1 LTR MaLR -2 392 1 1 1713 1380 184 30 41 chrX 147850201 147850226 -18800070 - L1_Rod LINE L1 -3217 2630 2613 9 1713 932 142 31 52 chrX 147850226 147850419 -18799877 - B2_Mm2 SINE B2 -5 190 2 1 1713 1380 184 30 41 chrX 147850419 147850500 -18799796 - L1_Rod LINE L1 -3235 2612 2532 9 1713 880 169 13 13 chrX 147850500 147850650 -18799646 - B1_Mur4 SINE Alu 0 150 1 1 1713 1380 189 26 32 chrX 147850650 147851010 -18799286 - L1_Rod LINE L1 -3316 2531 2079 9 1713 5232 234 51 59 chrX 147851719 147852691 -18797605 - Lx7 LINE L1 -510 7186 6181 1 1713 204 125 0 0 chrX 147852691 147852723 -18797573 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1713 446 120 13 0 chrX 147852723 147852797 -18797499 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 1713 5232 234 51 59 chrX 147852797 147852971 -18797325 - Lx7 LINE L1 -1516 6180 6013 1 1713 3369 98 53 29 chrX 147852971 147853135 -18797161 + RLTR31B_Mm LTR ERVK 1 163 -394 1 1713 1265 27 0 0 chrX 147853135 147853282 -18797014 + B1_Mm SINE Alu 1 147 0 1 1713 3369 98 53 29 chrX 147853282 147853661 -18796635 + RLTR31B_Mm LTR ERVK 164 557 0 1 1713 5232 192 42 27 chrX 147853661 147854343 -18795953 - Lx7 LINE L1 -1684 6012 5351 1 1713 579 295 114 15 chrX 147854340 147854699 -18795597 - L1M5 LINE L1 -511 5822 5428 1 1713 343 318 79 35 chrX 147854723 147854925 -18795371 + L1M5 LINE L1 5607 5817 -307 1 1713 585 259 22 0 chrX 147855025 147855164 -18795132 + B1F SINE Alu 5 146 -3 1 1713 4014 107 14 3 chrX 147855328 147855919 -18794377 + Lx2 LINE L1 6401 6997 0 1 1713 245 176 27 68 chrX 147855986 147856059 -18794237 + MT2B2 LTR ERVL 145 214 -370 1 1713 223 263 52 17 chrX 147856013 147856071 -18794225 + B4A SINE B4 88 147 -145 1 1713 256 248 87 25 chrX 147856071 147856110 -18794186 + PB1D9 SINE Alu 3 105 -15 1 1713 198 0 0 0 chrX 147856603 147856625 -18793671 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 1713 633 27 0 0 chrX 147856625 147856699 -18793597 + (GA)n Simple_repeat Simple_repeat 1 75 0 1 1713 642 315 25 43 chrX 147857064 147857343 -18792953 + B4A SINE B4 1 274 -18 1 1713 585 349 48 68 chrX 147857737 147858426 -18791870 + L1MEf LINE L1 834 1508 -4692 1 1713 410 313 91 38 chrX 147858710 147859269 -18791027 + L1M2 LINE L1 2166 2780 -3363 1 1713 345 281 98 30 chrX 147859269 147859284 -18791012 + ORR1B1-int LTR MaLR 594 617 -1346 1 1713 785 276 78 60 chrX 147859284 147859566 -18790730 + MT2B LTR ERVL 1 287 -314 1 1713 4104 174 54 19 chrX 147859512 147860368 -18789928 + ORR1B1-int LTR MaLR 624 1509 0 1 1713 1700 193 83 25 chrX 147860368 147860730 -18789566 + ORR1B1 LTR MaLR 1 383 -11 1 1713 228 179 141 12 chrX 147860831 147860916 -18789380 + MusHAL1 LINE L1 1676 1771 -941 1 1713 767 158 13 82 chrX 147860956 147861115 -18789181 + B1_Mus1 SINE Alu 1 148 0 1 1713 477 226 57 0 chrX 147861140 147861246 -18789050 + RSINE1 SINE B4 14 125 -40 1 1713 415 271 52 105 chrX 147861285 147861431 -18788865 + L1M2 LINE L1 3026 3179 -2964 1 1713 783 210 69 83 chrX 147861431 147861473 -18788823 + B3 SINE B2 1 40 -176 1 1713 198 71 0 0 chrX 147861473 147861501 -18788795 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1 1713 783 210 69 83 chrX 147861501 147861676 -18788620 + B3 SINE B2 41 215 -1 1 1713 415 271 52 105 chrX 147861676 147861739 -18788557 + L1M2 LINE L1 3180 3224 -2919 1 1713 397 298 82 41 chrX 147861739 147861886 -18788410 + RSINE1 SINE B4 3 155 -10 1 1713 34 55 0 0 chrX 147861894 147861949 -18788347 + AT_rich Low_complexity Low_complexity 1 55 0 1 1713 828 181 89 40 chrX 147861949 147862174 -18788122 + MTD-int LTR MaLR 1023 1258 0 1 1713 1963 166 66 16 chrX 147862183 147862562 -18787734 + MTD LTR MaLR 13 410 -9 1 1713 243 0 0 0 chrX 147862663 147862690 -18787606 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 1 1713 1036 80 36 0 chrX 147862693 147862830 -18787466 - B1_Mus2 SINE Alu -5 142 1 1 1713 808 154 16 0 chrX 147863188 147863311 -18786985 - B1_Mur1 SINE Alu 0 149 25 1 1713 277 312 0 0 chrX 147864192 147864269 -18786027 - ID4 SINE ID -2 81 5 1 1713 309 51 0 0 chrX 147864663 147864702 -18785594 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1713 238 298 91 61 chrX 147865237 147865369 -18784927 - LTR33A LTR ERVL -305 215 80 1 1713 1074 88 0 13 chrX 147865624 147865773 -18784523 + B1_Mus1 SINE Alu 1 147 -1 1 1713 404 240 0 0 chrX 147866404 147866479 -18783817 - ID4_ SINE ID -7 76 2 1 1713 755 197 13 20 chrX 147866773 147866923 -18783373 + B1_Mur1 SINE Alu 1 149 0 1 1713 216 271 0 0 chrX 147867379 147867427 -18782869 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1713 2563 47 3 3 chrX 147867604 147867926 -18782370 - L1Md_F2 LINE L1 -1 6581 6260 1 1713 442 316 68 23 chrX 147868103 147868323 -18781973 + L1MDa LINE L1 21 250 -6383 1 1713 413 310 90 20 chrX 147868471 147868817 -18781479 + L1MDa LINE L1 898 1267 -5366 1 1713 246 228 53 0 chrX 147868841 147868898 -18781398 + RSINE1 SINE B4 65 124 -41 1 1713 615 39 0 0 chrX 147868899 147868977 -18781319 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 1713 6753 180 24 8 chrX 147869077 147870345 -18779951 - Lx5 LINE L1 -147 6903 5616 1 1713 618 256 197 15 chrX 147870345 147870543 -18779753 - ORR1D2 LTR MaLR -20 350 117 1 1713 24 0 0 0 chrX 147871126 147871150 -18779146 + AT_rich Low_complexity Low_complexity 1 24 0 1 1713 815 158 141 11 chrX 147871156 147871341 -18778955 - B3 SINE B2 -6 210 2 1 1713 2380 111 102 11 chrX 147871878 147872250 -18778046 - MTC LTR MaLR -15 406 1 1 1713 317 316 21 0 chrX 147872250 147872344 -18777952 - PB1 SINE Alu -13 114 19 1 1713 740 272 12 12 chrX 147872516 147872680 -18777616 - B3 SINE B2 -6 210 47 1 1713 767 184 212 21 chrX 147872782 147872971 -18777325 - URR1B DNA MER1_type 0 225 1 1 1713 810 204 142 11 chrX 147873325 147873508 -18776788 - B3 SINE B2 -9 207 1 1 1713 701 191 42 14 chrX 147873528 147873671 -18776625 + B1_Mur2 SINE Alu 2 148 -1 1 1713 964 193 54 15 chrX 147873701 147873906 -18776390 - B3 SINE B2 0 216 4 1 1713 27 62 0 0 chrX 147874748 147874796 -18775500 + AT_rich Low_complexity Low_complexity 1 48 0 1 1713 275 216 61 10 chrX 147874810 147874908 -18775388 - L1M5 LINE L1 -1558 4588 4486 1 1713 415 338 20 7 chrX 147875180 147875326 -18774970 - RSINE1 SINE B4 -17 148 1 1 1713 315 286 108 39 chrX 147875332 147875434 -18774862 - PB1D10 SINE Alu -7 110 2 1 1713 187 261 232 28 chrX 147875465 147875607 -18774689 + MIR SINE MIR 88 258 -4 1 1713 1057 65 0 0 chrX 147875666 147875804 -18774492 - B1_Mus2 SINE Alu 0 147 10 1 1713 836 139 211 0 chrX 147875850 147876016 -18774280 + B3 SINE B2 8 208 -8 1 1713 642 275 13 39 chrX 147876100 147876255 -18774041 - RSINE1 SINE B4 0 165 15 1 1713 276 239 14 27 chrX 147876432 147876505 -18773791 + Tigger15a DNA TcMar 193 264 -451 1 1713 1448 243 93 9 chrX 147876557 147876902 -18773394 - MTE2b LTR MaLR -5 374 1 1 1713 1192 54 0 13 chrX 147877007 147877156 -18773140 - B1_Mus2 SINE Alu 0 147 1 1 1713 506 208 36 78 chrX 147877481 147877648 -18772648 + RSINE1 SINE B4 3 162 -3 1 1713 202 250 33 0 chrX 147877946 147878006 -18772290 + (CATATA)n Simple_repeat Simple_repeat 3 64 0 1 1713 539 250 14 183 chrX 147878092 147878234 -18772062 + B3 SINE B2 62 197 -19 1 1713 572 291 19 19 chrX 147878335 147878496 -18771800 + RSINE1 SINE B4 3 163 -2 1 1713 459 303 187 32 chrX 147879590 147879807 -18770489 + L1M4b LINE L1 229 473 -6861 1 1713 1364 169 0 0 chrX 147879807 147880032 -18770264 - URR1A DNA MER1_type -1 225 1 1 1713 459 303 187 32 chrX 147880032 147880124 -18770172 + L1M4b LINE L1 474 586 -6748 1 1713 539 153 18 3 chrX 147880260 147880358 -18769938 + MTC LTR MaLR 1 104 -292 1 1713 6527 174 53 16 chrX 147880374 147880496 -18769800 - Lx5 LINE L1 -4 7046 6905 1 1713 444 19 0 0 chrX 147880496 147880549 -18769747 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 1713 315 0 0 0 chrX 147880549 147880583 -18769713 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1713 6527 174 53 16 chrX 147880583 147881343 -18768953 - Lx5 LINE L1 -146 6904 6146 1 1713 279 0 0 0 chrX 147881343 147881374 -18768922 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1713 6527 174 53 16 chrX 147881374 147881777 -18768519 - Lx5 LINE L1 -905 6145 5713 1 1713 1617 120 0 8 chrX 147881779 147882022 -18768274 + MTC LTR MaLR 178 418 -3 1 1713 7338 80 19 5 chrX 147882677 147883764 -18766532 + L1_Mus3 LINE L1 5528 6631 -7 1 1713 211 338 36 36 chrX 147883938 147884021 -18766275 + BC1_Mm scRNA scRNA 4 86 -66 1 1713 331 267 20 91 chrX 147884080 147884179 -18766117 + MTEa LTR MaLR 1 92 -287 1 1713 921 161 0 20 chrX 147884230 147884382 -18765914 + B1_Mur4 SINE Alu 1 149 -1 1 1713 856 284 64 32 chrX 147884584 147885056 -18765240 + L1M4b LINE L1 3463 3949 -3057 1 1713 364 235 25 0 chrX 147885509 147885628 -18764668 + L1M4b LINE L1 4212 4333 -2673 1 1713 376 293 73 0 chrX 147885659 147885842 -18764454 - L1MA7 LINE L1 -423 5877 5683 1 1713 1211 269 79 23 chrX 147885851 147886556 -18763740 - L1MA7 LINE L1 -966 5177 4433 1 1713 1442 140 5 0 chrX 147886564 147886785 -18763511 + URR1A DNA MER1_type 5 226 0 1 1713 234 282 106 13 chrX 147887040 147887191 -18763105 - L1MC LINE L1 -1892 4254 4090 1 1713 207 0 0 0 chrX 147887326 147887349 -18762947 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1713 910 223 22 15 chrX 147887460 147887673 -18762623 - B3A SINE B2 -13 203 1 1 1713 807 254 40 4 chrX 147887684 147887961 -18762335 + L1MB7 LINE L1 5587 5873 -311 1 1713 273 161 258 0 chrX 147887963 147888025 -18762271 + ID4_ SINE ID 2 79 -4 1 1713 414 248 264 49 chrX 147888038 147888204 -18762092 + L1MD LINE L1 4466 4669 -1477 1 1713 244 311 46 28 chrX 147888204 147888313 -18761983 + PB1D9 SINE Alu 5 115 -5 1 1713 414 248 264 49 chrX 147888313 147888736 -18761560 + L1MD LINE L1 4670 5182 -964 1 1713 362 292 85 24 chrX 147889093 147889258 -18761038 - MIR SINE MIR -28 180 5 1 1713 962 257 19 0 chrX 147889455 147889665 -18760631 - B3 SINE B2 -2 214 1 1 1713 226 255 39 0 chrX 147889863 147889914 -18760382 - MIRm SINE MIR -4 272 220 1 1713 224 327 18 71 chrX 147889914 147889975 -18760321 - L2a LINE L2 -6 3420 3315 1 1713 198 0 0 0 chrX 147891323 147891345 -18758951 + (TTCCC)n Simple_repeat Simple_repeat 5 26 0 1 1713 228 303 126 39 chrX 147891497 147891624 -18758672 + L2 LINE L2 2743 2880 -539 1 1713 212 222 0 0 chrX 147892024 147892069 -18758227 - ID4 SINE ID -36 47 3 1 1713 359 289 21 0 chrX 147892093 147892190 -18758106 - PB1D10 SINE Alu -17 100 2 1 1713 362 328 43 14 chrX 147892454 147892593 -18757703 - B1_Mur3 SINE Alu -2 147 5 1 1713 524 298 81 9 chrX 147892469 147892631 -18757665 - ID_B1 SINE B4 -4 220 52 1 1713 486 0 0 0 chrX 147892892 147892946 -18757350 + (TTTA)n Simple_repeat Simple_repeat 1 54 0 1 1713 502 323 12 37 chrX 147892946 147893107 -18757189 - RSINE1 SINE B4 -1 164 8 1 1713 3390 123 65 10 chrX 147893149 147893744 -18756552 - RMER6A LTR ERVK 0 756 129 1 1713 2290 102 0 6 chrX 147893744 147894070 -18756226 - ORR1A3 LTR MaLR 0 326 3 1 1713 3960 51 0 0 chrX 147894413 147894926 -18755370 + L1Md_F2 LINE L1 5074 5586 -297 1 1713 8127 41 6 0 chrX 147894926 147895904 -18754392 + L1Md_F2 LINE L1 5587 6570 -12 1 1713 485 232 32 0 chrX 147896002 147896097 -18754199 - MTE2b LTR MaLR -67 312 215 1 1713 716 182 348 32 chrX 147896211 147896525 -18753771 - MTD LTR MaLR -5 414 1 1 1713 297 151 19 0 chrX 147897092 147897145 -18753151 - B3A SINE B2 -144 54 1 1 1713 439 297 0 29 chrX 147897301 147897405 -18752891 - PB1 SINE Alu -10 117 17 1 1713 313 167 0 0 chrX 147897470 147897524 -18752772 - B1F SINE Alu -60 89 36 1 1713 244 151 89 76 chrX 147897524 147897543 -18752753 - MT2B2 LTR ERVL -334 234 171 1 1713 324 280 0 26 chrX 147897806 147897883 -18752413 + B4A SINE B4 81 155 -137 1 1713 474 307 0 0 chrX 147897819 147897920 -18752376 + PB1D7 SINE Alu 7 107 -13 1 1713 415 216 197 16 chrX 147897981 147898108 -18752188 - RSINE1 SINE B4 -13 152 3 1 1713 570 293 19 25 chrX 147899228 147899389 -18750907 + MER58A DNA MER1_type 35 194 -30 1 1713 267 253 118 68 chrX 147900231 147900392 -18749904 - MamRep605 Unknown Unknown -200 676 508 1 1713 1291 39 0 0 chrX 147900547 147900703 -18749593 - B2_Mm2 SINE B2 -39 156 1 1 1713 1557 48 0 0 chrX 147901067 147901254 -18749042 + B2_Mm1a SINE B2 1 187 -6 1 1713 231 266 72 48 chrX 147901359 147901442 -18748854 - MamRep605 Unknown Unknown -683 193 109 1 1713 696 192 46 0 chrX 147902905 147903035 -18747261 - B1_Mur1 SINE Alu -1 148 13 1 1713 870 173 0 7 chrX 147903118 147903258 -18747038 + B1_Mur2 SINE Alu 3 141 -8 1 1713 24 32 0 0 chrX 147903635 147903666 -18746630 + AT_rich Low_complexity Low_complexity 1 31 0 1 1713 850 132 96 0 chrX 147903675 147903811 -18746485 + B1_Mur4 SINE Alu 2 150 0 1 1713 21 36 0 0 chrX 147904856 147904884 -18745412 + AT_rich Low_complexity Low_complexity 1 28 0 1 1713 284 297 0 0 chrX 147905084 147905158 -18745138 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 1 1713 215 214 14 0 chrX 147905180 147905250 -18745046 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 1713 219 103 0 0 chrX 147908247 147908286 -18742010 + (A)n Simple_repeat Simple_repeat 1 39 0 1 1713 230 343 28 9 chrX 147908826 147908932 -18741364 + L2 LINE L2 2388 2495 -924 1 1713 1028 194 44 15 chrX 147909288 147909492 -18740804 + B3 SINE B2 1 210 -6 1 1713 202 242 0 57 chrX 147909586 147909656 -18740640 + T-rich Low_complexity Low_complexity 1 66 0 1 1713 2482 152 43 2 chrX 147909699 147910122 -18740174 - RMER15 LTR ERVL 0 575 136 1 1713 606 225 21 21 chrX 147910161 147910302 -18739994 + B3A SINE B2 1 141 -57 1 1713 463 164 88 24 chrX 147910302 147910427 -18739869 + Lx3B LINE L1 6838 6970 -3 1 1713 3415 18 5 25 chrX 147910559 147910963 -18739333 + MTA_Mm LTR MaLR 1 396 0 1 1713 22 35 0 0 chrX 147911349 147911378 -18738918 + AT_rich Low_complexity Low_complexity 1 29 0 1 1713 1306 93 11 0 chrX 147911378 147911561 -18738735 + B2_Mm1t SINE B2 1 185 -8 1 1713 37 0 0 0 chrX 147911589 147911626 -18738670 + AT_rich Low_complexity Low_complexity 1 37 0 1 1713 33174 75 10 13 chrX 147911626 147917857 -18732439 - L1Md_F2 LINE L1 -14 6568 358 1 1713 905 152 0 0 chrX 147918246 147918378 -18731918 + B1_Mus2 SINE Alu 10 141 -6 1 1713 4999 50 0 0 chrX 147918446 147919049 -18731247 + L1_Mus1 LINE L1 5963 6565 -2 1 1713 1007 190 6 16 chrX 147919056 147919238 -18731058 + B3 SINE B2 27 206 -10 1 1713 452 292 22 7 chrX 147919266 147919404 -18730892 + B1_Mur1 SINE Alu 1 140 -9 1 1713 301 196 102 7 chrX 147919659 147919757 -18730539 + MLT1H LTR MaLR 376 543 -6 1 1713 220 305 0 0 chrX 147920380 147920439 -18729857 - PB1 SINE Alu -58 69 11 1 1713 446 353 0 0 chrX 147920459 147920595 -18729701 + MER5A1 DNA MER1_type 16 151 -15 1 1713 24 67 0 0 chrX 147920970 147921015 -18729281 + AT_rich Low_complexity Low_complexity 1 45 0 1 1713 1491 289 51 43 chrX 147921054 147921516 -18728780 - Lx9 LINE L1 -206 7438 6984 1 1713 574 231 0 8 chrX 147921516 147921634 -18728662 + PB1D9 SINE Alu 4 120 0 1 1713 1491 289 51 43 chrX 147921634 147921691 -18728605 - Lx9 LINE L1 -661 6983 6927 1 1713 1409 76 16 0 chrX 147921691 147921876 -18728420 + B2_Mm2 SINE B2 1 188 -7 1 1713 1491 289 51 43 chrX 147921876 147921984 -18728312 - Lx9 LINE L1 -718 6926 6805 1 1713 733 233 126 11 chrX 147922006 147922197 -18728099 - Lx9 LINE L1 -1075 6569 6357 1 1713 216 0 0 0 chrX 147922273 147922297 -18727999 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 1 1713 283 269 0 56 chrX 147922481 147922552 -18727744 - PB1D9 SINE Alu -3 117 51 1 1713 298 275 25 0 chrX 147922647 147922727 -18727569 - ID4 SINE ID 0 83 2 1 1713 1226 172 34 0 chrX 147922775 147922979 -18727317 - B3 SINE B2 -5 211 1 1 1713 350 325 79 46 chrX 147923015 147923318 -18726978 - L1M4 LINE L1 -890 5256 4944 1 1713 7146 67 5 17 chrX 147923318 147924465 -18725831 + L1_Mus2 LINE L1 5434 6566 0 1 1713 1343 113 0 0 chrX 147924659 147924844 -18725452 - B2_Mm2 SINE B2 -10 185 1 1 1713 513 73 0 30 chrX 147924931 147925030 -18725266 + (TG)n Simple_repeat Simple_repeat 2 97 0 1 1713 362 203 0 0 chrX 147925046 147925105 -18725191 - RSINE1 SINE B4 -103 62 4 1 1713 307 269 39 0 chrX 147925215 147925293 -18725003 - ID2 SINE ID -2 81 1 1 1713 21 36 0 0 chrX 147925340 147925368 -18724928 + AT_rich Low_complexity Low_complexity 1 28 0 1 1713 283 319 58 0 chrX 147925370 147925439 -18724857 + B1F SINE Alu 16 88 -61 1 1713 277 250 67 11 chrX 147925569 147925658 -18724638 + MLT1C LTR MaLR 68 161 -306 1 1713 214 295 65 0 chrX 147925672 147925751 -18724545 + B1F1 SINE Alu 1 96 -21 1 1713 1036 228 19 0 chrX 147925848 147926063 -18724233 + ID_B1 SINE B4 3 221 -3 1 1713 486 249 5 10 chrX 147926084 147926198 -18724098 + MLT1C LTR MaLR 245 439 -28 1 1713 633 233 196 22 chrX 147926203 147926387 -18723909 - B3 SINE B2 0 216 1 1 1713 259 286 0 31 chrX 147926493 147926558 -18723738 + tRNA-Ala-GCY_ tRNA tRNA 13 75 0 1 1713 389 109 16 0 chrX 147926599 147926663 -18723633 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 1713 456 279 54 19 chrX 147926663 147926840 -18723456 + B3A SINE B2 8 188 -28 1 1713 591 100 198 10 chrX 147926963 147927064 -18723232 + PB1D9 SINE Alu 1 120 0 1 1713 234 105 0 0 chrX 147927065 147927103 -18723193 + (A)n Simple_repeat Simple_repeat 1 38 0 1 1713 1733 175 60 3 chrX 147927110 147927442 -18722854 - MTD LTR MaLR -68 351 1 1 1713 246 208 0 0 chrX 147927459 147927512 -18722784 + T-rich Low_complexity Low_complexity 1 53 0 1 1713 395 130 13 0 chrX 147927867 147927944 -18722352 + (TTCC)n Simple_repeat Simple_repeat 2 79 0 1 1713 1119 128 37 21 chrX 147927948 147928139 -18722157 - B2_Mm2 SINE B2 -1 194 1 1 1713 230 333 97 36 chrX 147928736 147928901 -18721395 - L2a LINE L2 -199 3227 3053 1 1713 944 144 0 0 chrX 147929963 147930102 -18720194 + B1_Mus1 SINE Alu 1 139 -9 1 1713 251 318 89 50 chrX 147930358 147930560 -18719736 + L1_Rod LINE L1 1203 1412 -4435 1 1713 456 189 218 16 chrX 147930597 147930721 -18719575 + Lx8 LINE L1 7188 7336 -137 1 1713 489 263 89 77 chrX 147930738 147930917 -18719379 + L1_Mur3 LINE L1 2447 2636 -3244 1 1713 1209 61 0 0 chrX 147930917 147931064 -18719232 - B1_Mus1 SINE Alu 0 148 2 1 1713 489 263 89 77 chrX 147931064 147931275 -18719021 + L1_Mur3 LINE L1 2637 2842 -3038 1 1713 516 331 19 6 chrX 147931303 147931461 -18718835 + RSINE1 SINE B4 6 165 0 1 1713 1552 274 103 31 chrX 147931582 147932520 -18717776 + L1_Mur3 LINE L1 2944 3949 -1931 1 1713 1118 82 7 0 chrX 147932976 147933122 -18717174 - B1_Mm SINE Alu 0 147 1 1 1713 1398 219 110 8 chrX 147933172 147933646 -18716650 + L1_Mur3 LINE L1 3948 4469 -1411 1 1713 564 168 0 61 chrX 147933651 147933765 -18716531 + MTD LTR MaLR 2 108 -311 1 1713 3241 148 183 110 chrX 147933765 147934594 -18715702 + RMER19B LTR ERVK 1 890 -12 1 1713 1470 201 51 17 chrX 147934608 147934901 -18715395 + MTD LTR MaLR 103 405 -14 1 1713 1497 260 60 21 chrX 147934964 147935585 -18714711 + L1_Mur3 LINE L1 4505 5149 -731 1 1713 415 183 84 11 chrX 147935661 147935857 -18714439 + Lx9 LINE L1 7401 7640 -4 1 1713 659 203 31 48 chrX 147935855 147936069 -18714227 + L1_Mur3 LINE L1 5249 5470 -889 1 1713 2366 131 65 13 chrX 147936070 147936460 -18713836 + RMER19A LTR ERVK 1 370 -241 1 1713 36970 4 0 0 chrX 147936460 147941776 -18708520 + L1Md_A LINE L1 270 5586 -297 1 1713 9037 4 0 0 chrX 147941776 147942772 -18707524 + L1Md_A LINE L1 5587 6582 0 1 1713 2754 103 21 0 chrX 147942778 147943165 -18707131 + RMER19A LTR ERVK 343 737 0 1 1713 1201 275 9 72 chrX 147943192 147943492 -18706804 + Lx7 LINE L1 5433 5709 -138 1 1713 1389 79 21 0 chrX 147943492 147943681 -18706615 + B2_Mm2 SINE B2 1 193 -2 1 1713 1201 276 11 72 chrX 147943681 147943859 -18706437 + Lx7 LINE L1 5710 5918 -1778 1 1713 530 138 148 94 chrX 147944051 147944179 -18706117 + B1_Mus2 SINE Alu 3 137 -10 1 1713 288 0 0 0 chrX 147944182 147944214 -18706082 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1713 268 192 0 0 chrX 147944387 147944439 -18705857 + MTEa LTR MaLR 3 54 -325 1 1713 226 67 0 43 chrX 147944443 147944490 -18705806 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 1 1713 416 332 117 49 chrX 147944522 147944848 -18705448 + MT2A LTR ERVL 93 440 -93 1 1713 519 247 29 17 chrX 147944850 147945023 -18705273 - L1MA4A LINE L1 -452 5851 5677 1 1713 213 65 0 0 chrX 147945027 147945058 -18705238 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1713 808 105 65 0 chrX 147945058 147945182 -18705114 - B1_Mur4 SINE Alu -11 139 8 1 1713 493 267 65 32 chrX 147945280 147945404 -18704892 - B1F1 SINE Alu -20 129 2 1 1713 268 183 26 78 chrX 147945482 147945559 -18704737 + MTEa LTR MaLR 172 244 -175 1 1713 253 330 113 28 chrX 147945657 147945763 -18704533 + PB1D10 SINE Alu 3 117 0 1 1713 405 0 0 0 chrX 147946367 147946412 -18703884 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1713 898 251 140 33 chrX 147946499 147946796 -18703500 - MER45R DNA Tip100 -17 1564 1235 1 1713 367 259 12 12 chrX 147946796 147946878 -18703418 - ID4 SINE ID 0 83 2 1 1713 898 251 140 33 chrX 147946878 147946979 -18703317 - MER45R DNA Tip100 -347 1234 1123 1 1713 279 269 65 59 chrX 147947033 147947168 -18703128 + Lx8 LINE L1 7303 7446 -27 1 1713 2138 151 15 56 chrX 147947168 147947562 -18702734 - ORR1C1 LTR MaLR 0 378 1 1 1713 279 269 65 59 chrX 147947562 147947596 -18702700 + Lx8 LINE L1 7447 7473 0 1 1713 364 171 39 26 chrX 147947754 147947832 -18702464 - ID4_ SINE ID -2 81 3 1 1713 496 277 9 0 chrX 147947850 147947962 -18702334 - PB1D9 SINE Alu -6 114 2 1 1713 556 285 11 80 chrX 147947962 147948054 -18702242 - ID SINE ID -144 80 2 1 1713 718 257 72 23 chrX 147948054 147948316 -18701980 - MER45R DNA Tip100 -497 1084 810 1 1713 338 299 77 94 chrX 147948457 147948504 -18701792 + MIR SINE MIR 9 53 -215 1 1713 991 277 45 35 chrX 147948504 147948878 -18701418 - MTEa LTR MaLR -1 378 1 1 1713 338 329 76 23 chrX 147948878 147949024 -18701272 + MIR SINE MIR 44 198 -64 1 1713 790 133 0 0 chrX 147949159 147949279 -18701017 + B1_Mur2 SINE Alu 1 120 -29 1 1713 386 317 32 8 chrX 147949280 147949404 -18700892 - B1F1 SINE Alu -22 127 1 1 1713 644 314 169 0 chrX 147950208 147950527 -18699769 + L2a LINE L2 3024 3396 -30 1 1713 237 281 183 0 chrX 147950527 147950609 -18699687 + L2a LINE L2 3319 3415 -11 1 1713 2033 116 117 21 chrX 147950617 147951003 -18699293 + Lx4A LINE L1 6634 7056 -2 1 1713 31 0 0 0 chrX 147951003 147951034 -18699262 + AT_rich Low_complexity Low_complexity 1 31 0 1 1713 662 269 40 6 chrX 147951038 147951214 -18699082 + B3 SINE B2 34 215 -1 1 1713 818 203 0 0 chrX 147951226 147951374 -18698922 + B1_Mur4 SINE Alu 3 150 0 1 1713 466 182 50 37 chrX 147951398 147951506 -18698790 + B1F SINE Alu 33 148 0 1 1713 1259 54 78 0 chrX 147951506 147951672 -18698624 + B2_Mm2 SINE B2 3 181 -14 1 1713 306 0 0 0 chrX 147951706 147951740 -18698556 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1713 774 36 264 0 chrX 147951819 147951929 -18698367 - B1_Mus1 SINE Alu -5 143 5 1 1713 191 333 105 67 chrX 147951929 147952167 -18698129 + L2 LINE L2 2443 2689 -730 1 1713 260 299 171 81 chrX 147952249 147952388 -18697908 + Arthur1B DNA Tip100 89 245 -980 1 1713 833 176 0 40 chrX 147952388 147952536 -18697760 + B1_Mur2 SINE Alu 4 145 -4 1 1713 204 40 0 0 chrX 147952536 147952561 -18697735 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1 1713 260 299 171 81 chrX 147952561 147952631 -18697665 + Arthur1B DNA Tip100 246 317 -908 1 1713 419 294 45 9 chrX 147952781 147952861 -18697435 + B3A SINE B2 5 88 -110 1 1713 2237 101 6 3 chrX 147952861 147953179 -18697117 + ORR1A2 LTR MaLR 1 319 -8 1 1713 266 341 22 11 chrX 147953200 147953289 -18697007 + B3 SINE B2 97 186 -30 1 1713 903 137 0 14 chrX 147953462 147953610 -18696686 - B1_Mur4 SINE Alu 0 150 5 1 1713 333 230 7 100 chrX 147953489 147953629 -18696667 - MT2B LTR ERVL -323 278 152 1 1713 639 250 171 6 chrX 147953644 147953825 -18696471 - ID_B1 SINE B4 -3 221 11 1 1713 811 134 256 0 chrX 147954213 147954385 -18695911 - B3 SINE B2 0 216 1 1 1713 188 276 185 23 chrX 147954676 147954822 -18695474 + MIRc SINE MIR 100 264 -4 1 1713 204 167 14 43 chrX 147957323 147957392 -18692904 + (TATATG)n Simple_repeat Simple_repeat 4 70 0 1 1713 201 281 64 64 chrX 147957471 147957581 -18692715 + MIRc SINE MIR 20 129 -139 1 1713 221 215 148 0 chrX 147957933 147958016 -18692280 + B1F2 SINE Alu 43 137 -12 1 1713 351 0 0 0 chrX 147958016 147958055 -18692241 + (TAA)n Simple_repeat Simple_repeat 2 40 0 1 1713 28 29 0 0 chrX 147958097 147958132 -18692164 + AT_rich Low_complexity Low_complexity 1 35 0 1 1713 881 255 48 78 chrX 147958488 147958782 -18691514 - B4 SINE B4 -5 287 3 1 1713 750 304 134 19 chrX 147958825 147959087 -18691209 - B4A SINE B4 0 292 1 1 1713 638 267 34 0 chrX 147959136 147959282 -18691014 - RSINE1 SINE B4 -12 153 3 1 1713 832 98 0 61 chrX 147959302 147959433 -18690863 - B1_Mus1 SINE Alu 0 148 26 1 1713 22 35 0 0 chrX 147959438 147959467 -18690829 + AT_rich Low_complexity Low_complexity 1 29 0 1 1713 280 291 12 12 chrX 147959467 147959547 -18690749 + PB1D10 SINE Alu 5 84 -33 1 1713 390 312 126 46 chrX 147959563 147959825 -18690471 - L1ME4a LINE L1 -1 6123 5841 1 1713 30837 94 17 3 chrX 147959851 147965980 -18684316 - L1_Mus1 LINE L1 0 6567 349 1 1713 230 269 36 60 chrX 147966585 147966668 -18683628 - B3 SINE B2 -13 203 123 1 1713 734 263 131 48 chrX 147966623 147966891 -18683405 - B4A SINE B4 -1 291 2 1 1713 287 305 71 40 chrX 147967186 147967285 -18683011 - MER5A DNA MER1_type 0 189 88 1 1713 218 233 0 0 chrX 147967285 147967328 -18682968 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 1713 377 357 60 98 chrX 147967344 147967651 -18682645 - B4 SINE B4 -19 273 3 1 1713 568 275 127 9 chrX 147967863 147968076 -18682220 - Lx8 LINE L1 -283 7190 6953 1 1713 201 209 30 0 chrX 147968170 147968237 -18682059 + T-rich Low_complexity Low_complexity 4 72 0 1 1713 486 267 36 64 chrX 147968237 147968377 -18681919 - ID_B1 SINE B4 0 224 89 1 1713 738 206 61 0 chrX 147968252 147968383 -18681913 - B1_Mur1 SINE Alu -9 140 2 1 1713 626 267 6 28 chrX 147968383 147968560 -18681736 - Lx8 LINE L1 -617 6856 6684 1 1713 947 271 67 42 chrX 147968663 147968749 -18681547 - Lx8 LINE L1 -236 7237 7153 1 1713 1251 95 50 0 chrX 147968749 147968928 -18681368 - B2_Mm2 SINE B2 -6 189 2 1 1713 947 271 67 42 chrX 147968928 147969126 -18681170 - Lx8 LINE L1 -321 7152 6946 1 1713 579 179 17 162 chrX 147969133 147969306 -18680990 - B1_Mur4 SINE Alu -2 148 1 1 1713 860 209 89 5 chrX 147969336 147969538 -18680758 - Lx8 LINE L1 -472 7001 6783 1 1713 2375 269 60 27 chrX 147969527 147970279 -18680017 + Lx8 LINE L1 6020 6796 -677 1 1713 549 281 62 44 chrX 147970363 147970523 -18679773 - RSINE1 SINE B4 0 165 3 1 1713 289 329 0 10 chrX 147970594 147970796 -18679500 + (TG)n Simple_repeat Simple_repeat 1 200 0 1 1713 369 293 27 107 chrX 147970955 147971104 -18679192 - RSINE1 SINE B4 0 165 29 1 1713 906 268 20 5 chrX 147971115 147971314 -18678982 - ID_B1 SINE B4 -1 223 22 1 1713 289 306 23 23 chrX 147971245 147971332 -18678964 - BC1_Mm scRNA scRNA -63 89 3 1 1713 310 228 16 8 chrX 147971332 147971456 -18678840 - L1MDa LINE L1 -4151 2482 2358 1 1713 798 157 75 0 chrX 147971635 147971769 -18678527 + B1_Mus1 SINE Alu 5 148 0 1 1713 861 244 29 10 chrX 147971785 147971992 -18678304 + ID_B1 SINE B4 8 218 -6 1 1713 290 206 185 73 chrX 147972017 147972195 -18678101 - L2 LINE L2 -713 2706 2509 1 1713 562 321 72 5 chrX 147972915 147973109 -18677187 - MIR SINE MIR -21 241 35 1 1713 1224 28 0 0 chrX 147973129 147973270 -18677026 - B1_Mus2 SINE Alu -5 142 2 1 1713 1626 37 0 0 chrX 147973281 147973471 -18676825 - B2_Mm1a SINE B2 -2 191 2 1 1713 25 31 0 0 chrX 147973534 147973566 -18676730 + AT_rich Low_complexity Low_complexity 1 32 0 1 1713 213 271 0 0 chrX 147973770 147973818 -18676478 - L2a LINE L2 0 3426 3379 1 1713 318 293 0 24 chrX 147974348 147974432 -18675864 - ID4 SINE ID 0 83 2 1 1713 336 272 165 9 chrX 147974443 147974558 -18675738 + MER45C DNA Tip100 2 134 -819 1 1713 295 316 50 50 chrX 147974790 147974868 -18675428 + PB1 SINE Alu 21 99 -28 1 1713 729 225 36 7 chrX 147974868 147975007 -18675289 - B1_Mur2 SINE Alu -3 146 4 1 1713 295 316 50 50 chrX 147975007 147975028 -18675268 + PB1 SINE Alu 100 120 -7 1 1713 233 243 143 0 chrX 147975039 147975109 -18675187 + ID4_ SINE ID 2 81 -2 1 1713 732 277 86 58 chrX 147975160 147975520 -18674776 - ORR1D2 LTR MaLR 0 370 1 1 1713 2098 40 36 11 chrX 147975712 147975989 -18674307 - Lx3_Mus LINE L1 -1120 5889 5606 1 1713 6353 82 10 31 chrX 147975989 147976903 -18673393 + Lx3_Mus LINE L1 6110 7004 -5 1 1713 743 239 92 22 chrX 147976924 147977108 -18673188 + B3A SINE B2 1 197 -1 1 1713 467 198 28 19 chrX 147977166 147977274 -18673022 - B3 SINE B2 -7 209 101 1 1713 717 113 2 1 chrX 147978035 147978170 -18672126 - Lx2B LINE L1 -929 6071 5938 1 1713 743 70 0 0 chrX 147978206 147978306 -18671990 - B1_Mus2 SINE Alu -8 139 40 1 1713 564 287 140 49 chrX 147978350 147978614 -18671682 - MER5C DNA MER1_type 0 313 23 1 1713 876 122 233 42 chrX 147978614 147978803 -18671493 - URR1A DNA MER1_type -1 225 1 1 1713 564 287 140 49 chrX 147978803 147978824 -18671472 - MER5C DNA MER1_type -291 22 2 1 1713 358 287 0 103 chrX 147978922 147978994 -18671302 - ID_B1 SINE B4 -54 170 103 1 1713 1297 196 114 35 chrX 147978994 147979337 -18670959 - ORR1D1 LTR MaLR -4 370 1 1 1713 358 287 0 103 chrX 147979337 147979361 -18670935 - ID_B1 SINE B4 -122 102 84 1 1713 283 312 129 0 chrX 147979617 147979710 -18670586 + PB1D10 SINE Alu 6 110 -7 1 1714 24 53 0 0 chrX 147980302 147980340 -18669956 + AT_rich Low_complexity Low_complexity 1 38 0 1 1714 359 267 137 8 chrX 147980342 147980459 -18669837 - B1F SINE Alu 0 149 18 1 1714 1038 115 0 20 chrX 147980495 147980646 -18669650 - B1_Mur4 SINE Alu 0 150 3 1 1714 1296 102 11 0 chrX 147980708 147980885 -18669411 + B2_Mm1t SINE B2 1 179 -14 1 1714 426 69 331 0 chrX 147980912 147981014 -18669282 + B2_Mm2 SINE B2 46 186 -9 1 1714 299 191 122 11 chrX 147981160 147981242 -18669054 + MER3 DNA MER1_type 70 161 -48 1 1714 931 203 53 44 chrX 147981242 147981448 -18668848 - B3 SINE B2 -6 210 3 1 1714 2241 64 3 3 chrX 147981580 147981877 -18668419 - L1_Mus1 LINE L1 -2 6565 6269 1 1714 192 322 52 72 chrX 147982899 147982996 -18667300 - MIR3 SINE MIR -12 196 102 1 1714 454 304 58 55 chrX 147983298 147983560 -18666736 - L1MC4a LINE L1 -1925 5957 5690 1 1714 398 244 12 0 chrX 147983560 147983642 -18666654 - ID4_ SINE ID 0 83 1 1 1714 454 304 58 55 chrX 147983642 147983758 -18666538 - L1MC4a LINE L1 -2193 5689 5578 1 1714 323 248 98 16 chrX 147983948 147984071 -18666225 - Lx7 LINE L1 0 7696 7564 1 1714 324 0 0 0 chrX 147984104 147984140 -18666156 + (TC)n Simple_repeat Simple_repeat 1 36 0 1 1714 306 0 0 0 chrX 147984140 147984173 -18666123 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1714 640 146 0 159 chrX 147984180 147984287 -18666009 - Lx7 LINE L1 -348 7348 7250 1 1714 727 190 36 14 chrX 147984287 147984426 -18665870 + B1_Mus1 SINE Alu 5 146 -2 1 1714 640 146 0 159 chrX 147984426 147984481 -18665815 - Lx7 LINE L1 -447 7249 7212 1 1714 312 87 43 14 chrX 147984481 147984551 -18665745 + (TTATA)n Simple_repeat Simple_repeat 5 76 0 1 1714 898 159 7 20 chrX 147985595 147985743 -18664553 + B1_Mus2 SINE Alu 2 147 0 1 1714 987 144 66 6 chrX 147985893 147986075 -18664221 - B2_Mm2 SINE B2 -1 194 2 1 1714 2423 209 21 10 chrX 147986174 147986685 -18663611 - Lx2B LINE L1 -3 6997 6481 1 1714 1225 37 161 0 chrX 147987564 147987726 -18662570 - B2_Mm2 SINE B2 -6 189 2 1 1714 628 262 0 70 chrX 147989143 147989299 -18660997 + B1F SINE Alu 1 145 -4 1 1714 315 303 13 0 chrX 147989386 147989462 -18660834 + ID SINE ID 2 78 -146 1 1714 382 261 37 0 chrX 147989679 147989813 -18660483 - L1MC4 LINE L1 -140 7902 7764 1 1714 339 327 88 0 chrX 147991331 147991444 -18658852 + PB1 SINE Alu 5 127 0 1 1714 579 203 16 33 chrX 147991464 147991586 -18658710 - PB1D9 SINE Alu 0 120 1 1 1714 300 287 64 18 chrX 147991607 147991717 -18658579 - L1MD LINE L1 -2595 3551 3437 1 1714 235 208 0 0 chrX 147991745 147991793 -18658503 - L1MD LINE L1 -2696 3450 3403 1 1714 700 163 220 9 chrX 147991840 147992142 -18658154 - L1MD LINE L1 -2841 3305 2944 1 1714 232 272 53 53 chrX 147992235 147992367 -18657929 - L1MB5 LINE L1 -124 6050 5919 1 1714 572 263 36 13 chrX 147992372 147992508 -18657788 - ID_B1 SINE B4 -73 219 82 1 1714 269 308 192 0 chrX 147992501 147992621 -18657675 - B1F1 SINE Alu 0 149 7 1 1714 647 263 52 85 chrX 147992666 147992878 -18657418 - ID_B1 SINE B4 -15 209 5 1 1714 432 0 0 0 chrX 147993078 147993126 -18657170 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1714 2262 160 105 11 chrX 147993216 147993653 -18656643 - RMER1A Other Other -26 1004 527 1 1714 256 235 0 0 chrX 147993661 147993712 -18656584 - Lx8 LINE L1 -348 7125 7075 1 1714 510 130 0 53 chrX 147993713 147993827 -18656469 + Lx3A LINE L1 6872 6979 -2 1 1714 25 31 0 0 chrX 147993827 147993859 -18656437 + AT_rich Low_complexity Low_complexity 1 32 0 1 1714 336 48 0 0 chrX 147993973 147994015 -18656281 + (TCCC)n Simple_repeat Simple_repeat 1 42 0 1 1714 305 256 64 0 chrX 147994028 147994106 -18656190 - ID4 SINE ID 0 83 1 1 1714 341 301 48 10 chrX 147994132 147994236 -18656060 - PB1 SINE Alu -7 120 13 1 1714 254 154 0 0 chrX 147994256 147994318 -18655978 - L1MB5 LINE L1 -715 5729 5668 1 1714 557 193 193 0 chrX 147994354 147994473 -18655823 + B1_Mus1 SINE Alu 1 142 -6 1 1714 348 24 0 0 chrX 147994620 147994661 -18655635 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1714 3904 60 10 2 chrX 147994781 147995284 -18655012 - L1_Mus2 LINE L1 0 6566 6060 1 1714 889 216 48 14 chrX 147995285 147995492 -18654804 - B3 SINE B2 0 216 3 1 1714 792 280 114 5 chrX 147995499 147995700 -18654596 - B4A SINE B4 -68 224 2 1 1714 3815 122 98 36 chrX 147995783 147996495 -18653801 - RMER6A LTR ERVK 0 756 1 1 1714 723 233 18 31 chrX 147996699 147996925 -18653371 - L1MB5 LINE L1 -517 5667 5445 1 1714 445 246 31 0 chrX 147996925 147997055 -18653241 - L1M4 LINE L1 -663 5521 5388 1 1714 23 33 0 0 chrX 147997153 147997183 -18653113 + AT_rich Low_complexity Low_complexity 1 30 0 1 1714 942 144 27 0 chrX 147997328 147997474 -18652822 - B1_Mur4 SINE Alu 0 150 1 1 1714 290 75 0 0 chrX 147997648 147997688 -18652608 + URR1B DNA MER1_type 186 225 0 1 1714 1873 48 0 0 chrX 147997721 147997949 -18652347 - L1_Mus1 LINE L1 0 6567 6340 1 1714 1196 41 7 0 chrX 147998246 147998391 -18651905 - B1_Mus1 SINE Alu -2 146 1 1 1714 474 244 114 0 chrX 147998466 147998589 -18651707 - PB1D10 SINE Alu -1 148 12 1 1714 368 277 68 0 chrX 147998600 147998748 -18651548 - L1M4 LINE L1 -1117 5029 4872 1 1714 289 313 14 3 chrX 147998793 147998885 -18651411 + ID2 SINE ID 12 103 -49 1 1714 637 209 61 9 chrX 147998891 147999104 -18651192 - L1M4 LINE L1 -1287 4859 4636 1 1714 423 151 78 16 chrX 147999633 147999761 -18650535 + RMER17B LTR ERVK 322 457 -501 1 1714 534 31 0 0 chrX 147999762 147999826 -18650470 + (CATA)n Simple_repeat Simple_repeat 2 65 0 1 1714 970 135 0 0 chrX 148000123 148000264 -18650032 - B1_Mus1 SINE Alu -1 147 7 1 1714 307 257 217 32 chrX 148000310 148000467 -18649829 + MIR SINE MIR 64 249 -13 2 1714 191 81 54 0 chrX 148000826 148000863 -18649433 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 3 1714 674 281 9 61 chrX 148000918 148001130 -18649166 - RMER30 DNA MER1_type -1 201 1 4 1714 24 0 0 0 chrX 148001271 148001295 -18649001 + AT_rich Low_complexity Low_complexity 1 24 0 5 1714 340 137 151 0 chrX 148001346 148001419 -18648877 - L1MD2 LINE L1 -366 5993 5910 6 1714 363 268 89 25 chrX 148002419 148002576 -18647720 - L1ME4a LINE L1 -2 6122 5956 7 1714 956 231 39 0 chrX 148002583 148002786 -18647510 - B3 SINE B2 -5 211 1 8 1714 326 275 50 63 chrX 148003067 148003226 -18647070 - L1ME4a LINE L1 -415 5709 5553 7 1714 243 284 122 15 chrX 148003281 148003478 -18646818 + L1MC4a LINE L1 5826 6043 -1839 9 1714 22 56 0 0 chrX 148003484 148003520 -18646776 + AT_rich Low_complexity Low_complexity 1 36 0 1 1714 726 236 5 16 chrX 148003578 148003763 -18646533 - Lx7 LINE L1 -376 7320 7138 1 1714 215 160 0 20 chrX 148003763 148003814 -18646482 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 1 1714 404 281 70 31 chrX 148004575 148004862 -18645434 - L1MD LINE L1 -1000 5146 4849 1 1714 499 293 36 0 chrX 148005196 148005336 -18644960 + MIRb SINE MIR 109 253 -15 1 1714 431 265 111 34 chrX 148005468 148005687 -18644609 + MIRb SINE MIR 1 268 0 1 1714 220 213 26 13 chrX 148005855 148005931 -18644365 + CT-rich Low_complexity Low_complexity 3 79 0 1 1714 595 346 22 44 chrX 148006214 148006441 -18643855 - Charlie15a DNA MER1_type 0 224 3 1 1714 239 309 53 84 chrX 148006444 148006598 -18643698 - MIR3 SINE MIR -49 159 13 1 1714 300 332 113 51 chrX 148007328 148007585 -18642711 - L2c LINE L2 -1 3386 3114 1 1714 1060 206 28 28 chrX 148008348 148008563 -18641733 + B3 SINE B2 2 216 0 2 1714 508 326 14 14 chrX 148008647 148008787 -18641509 - RSINE1 SINE B4 -21 144 5 2 1714 418 243 30 19 chrX 148009067 148009173 -18641123 - PB1 SINE Alu 0 149 19 2 1714 319 261 69 132 chrX 148009277 148009436 -18640860 - ID_B1 SINE B4 0 224 76 2 1714 255 31 0 0 chrX 148009436 148009468 -18640828 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1714 186 71 0 0 chrX 148009530 148009558 -18640738 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 1714 1127 64 0 14 chrX 148009558 148009692 -18640604 - B1_Mus1 SINE Alu -13 135 2 2 1714 722 182 48 0 chrX 148009692 148009818 -18640478 - B1_Mur3 SINE Alu -16 133 2 2 1714 962 214 38 14 chrX 148009825 148010034 -18640262 - B3 SINE B2 0 216 3 2 1714 22 35 0 0 chrX 148010141 148010170 -18640126 + AT_rich Low_complexity Low_complexity 1 29 0 2 1714 367 310 126 25 chrX 148010234 148010353 -18639943 + RSINE1 SINE B4 13 143 -22 3 1714 324 146 134 0 chrX 148010526 148010608 -18639688 - Lx7 LINE L1 0 7696 7604 3 1714 1569 238 174 8 chrX 148010739 148011252 -18639044 - Lx7 LINE L1 -352 7344 6747 3 1714 217 167 24 0 chrX 148011378 148011420 -18638876 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 3 1714 495 264 24 32 chrX 148011675 148011800 -18638496 - B1F SINE Alu -16 133 10 3 1714 349 339 8 32 chrX 148011689 148011814 -18638482 - ID_B1 SINE B4 -22 202 81 3 1714 195 352 0 0 chrX 148012053 148012107 -18638189 + MIRb SINE MIR 43 96 -172 3 1714 29 0 0 0 chrX 148012111 148012140 -18638156 + AT_rich Low_complexity Low_complexity 1 29 0 3 1714 3081 6 46 0 chrX 148012690 148013041 -18637255 - IAPLTR1_Mm LTR ERVK 0 367 1 3 1714 52870 23 17 2 chrX 148013041 148019424 -18630872 - IAPEz-int LTR ERVK 0 6481 8 3 1714 3081 6 46 0 chrX 148019424 148019775 -18630521 - IAPLTR1_Mm LTR ERVK 0 367 1 3 1714 365 236 135 73 chrX 148019890 148020082 -18630214 + L1MC5 LINE L1 7728 7931 -30 3 1714 373 311 53 0 chrX 148020102 148020234 -18630062 - MIRb SINE MIR -19 249 111 3 1714 210 173 38 19 chrX 148020458 148020511 -18629785 + (TA)n Simple_repeat Simple_repeat 1 54 0 4 1714 496 259 35 9 chrX 148020528 148020641 -18629655 - B1_Mur1 SINE Alu -32 117 2 4 1714 307 328 0 16 chrX 148020736 148020863 -18629433 - L1MA6 LINE L1 -163 6137 6013 4 1714 252 212 0 0 chrX 148021044 148021110 -18629186 - L1MB8 LINE L1 -201 5977 5912 4 1714 1521 262 112 55 chrX 148021189 148021773 -18628523 - Lx5 LINE L1 -4 7046 6456 4 1714 4283 203 12 20 chrX 148021904 148022802 -18627494 - Lx5 LINE L1 -1 7049 6159 4 1714 3279 66 32 0 chrX 148022803 148023242 -18627054 + Lx3_Mus LINE L1 6556 7008 -1 4 1714 5170 140 35 3 chrX 148023269 148024246 -18626050 - L1_Mur2 LINE L1 -1878 3999 2992 4 1714 11561 33 6 1 chrX 148024283 148026444 -18623852 - L1Md_F3 LINE L1 0 6584 4413 4 1714 5028 153 14 4 chrX 148026652 148027606 -18622690 - L1_Mur2 LINE L1 -2873 3004 2042 4 1714 583 309 0 0 chrX 148027659 148027798 -18622498 - ID_B1 SINE B4 -4 220 82 4 1714 836 262 11 21 chrX 148027797 148027984 -18622312 - B3A SINE B2 -12 186 2 5 1714 398 221 0 13 chrX 148028043 148028121 -18622175 - ID4 SINE ID -4 79 3 5 1714 252 244 37 0 chrX 148028132 148028214 -18622082 - L1MA9 LINE L1 -44 6268 6184 5 1714 398 286 100 17 chrX 148028226 148028457 -18621839 - L1MA9 LINE L1 -194 6118 5869 5 1714 439 308 0 8 chrX 148028495 148028613 -18621683 - PB1D10 SINE Alu 0 117 1 5 1714 316 257 107 19 chrX 148028617 148028720 -18621576 - L1M4 LINE L1 -747 5431 5320 5 1714 1508 115 0 13 chrX 148028742 148028980 -18621316 - L1_Mur1 LINE L1 -718 5168 4934 5 1714 3167 127 29 47 chrX 148028978 148029557 -18620739 + Lx LINE L1 6061 6629 -25 5 1714 1624 144 0 4 chrX 148029583 148029855 -18620441 - L1_Mm LINE L1 -941 4942 4672 5 1714 624 290 40 33 chrX 148029858 148030126 -18620170 - L1M4 LINE L1 -1062 5084 4812 5 1714 4550 60 0 3 chrX 148030126 148030695 -18619601 - L1Md_F2 LINE L1 -2 6580 6014 5 1714 624 290 40 33 chrX 148030695 148030726 -18619570 - L1M4 LINE L1 -1335 4811 4783 5 1714 768 171 35 14 chrX 148030757 148030899 -18619397 - B1_Mus2 SINE Alu 0 147 3 5 1714 611 260 8 8 chrX 148030907 148031039 -18619257 - B1_Mur2 SINE Alu -8 141 10 6 1714 248 271 106 7 chrX 148031039 148031180 -18619116 - L1M4 LINE L1 -1349 4797 4643 5 1714 420 333 88 0 chrX 148031275 148031479 -18618817 + Lx9 LINE L1 7222 7443 -201 6 1714 792 146 43 14 chrX 148032209 148032348 -18617948 - B1_Mus1 SINE Alu -1 147 5 6 1714 318 325 12 0 chrX 148032611 148032691 -18617605 + ID4 SINE ID 3 83 0 6 1714 28 0 0 0 chrX 148032745 148032773 -18617523 + AT_rich Low_complexity Low_complexity 1 28 0 6 1714 333 250 8 82 chrX 148033265 148033387 -18616909 - PB1D10 SINE Alu 0 117 5 6 1714 290 322 38 57 chrX 148034229 148034387 -18615909 + MIRb SINE MIR 95 249 -19 6 1714 399 262 142 0 chrX 148034548 148034689 -18615607 + MER2 DNA MER2_type 4 164 -181 6 1714 23 0 0 0 chrX 148034724 148034747 -18615549 + AT_rich Low_complexity Low_complexity 1 23 0 6 1714 22 70 0 0 chrX 148034943 148034986 -18615310 + AT_rich Low_complexity Low_complexity 1 43 0 6 1714 326 259 128 54 chrX 148035134 148035338 -18614958 - L1MC4a LINE L1 -2020 5862 5644 7 1714 2440 52 3 0 chrX 148035438 148035747 -18614549 - L1Md_F2 LINE L1 0 6582 6273 7 1714 883 177 0 0 chrX 148035971 148036118 -18614178 - B1_Mus1 SINE Alu -1 147 1 7 1714 303 222 16 16 chrX 148036409 148036473 -18613823 - PB1D10 SINE Alu -2 115 52 7 1714 941 174 56 5 chrX 148036479 148036675 -18613621 - ORR1D1 LTR MaLR -168 206 1 7 1714 4517 226 93 14 chrX 148036693 148038063 -18612233 - L1_Mur3 LINE L1 -694 5186 3708 7 1714 642 279 99 12 chrX 148038044 148038447 -18611849 - L1MC4a LINE L1 -1446 4700 4263 7 1714 1193 46 0 0 chrX 148038796 148038947 -18611349 - L1Md_T LINE L1 0 6582 6432 7 1714 360 43 0 0 chrX 148039017 148039063 -18611233 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1714 3282 283 70 34 chrX 148039276 148040298 -18609998 + MTE-int LTR MaLR 46 1651 -312 7 1714 4820 65 16 0 chrX 148040496 148041114 -18609182 + L1_Mus1 LINE L1 5940 6567 0 7 1714 13530 72 19 15 chrX 148041453 148044242 -18606054 - L1VL2 LINE L1 -632 2983 177 8 1714 333 0 0 0 chrX 148044379 148044416 -18605880 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 1714 459 0 0 0 chrX 148044420 148044471 -18605825 + (GA)n Simple_repeat Simple_repeat 1 51 0 8 1714 321 321 124 9 chrX 148044493 148044606 -18605690 - RSINE1 SINE B4 -36 129 4 8 1714 1876 266 92 24 chrX 148044633 148046391 -18603905 - Lx9 LINE L1 -6 7638 5538 8 1714 528 104 155 10 chrX 148046397 148046494 -18603802 - B1_Mur3 SINE Alu 0 149 39 8 1714 457 227 83 69 chrX 148046511 148046741 -18603555 - L1_Rod LINE L1 -695 5608 5353 8 1714 456 107 53 0 chrX 148046728 148046803 -18603493 - RMER1C Other Other -15 1327 1249 8 1714 2550 218 95 51 chrX 148046802 148047007 -18603289 - L1_Rod LINE L1 -507 5340 5124 8 1714 911 157 207 6 chrX 148047007 148047186 -18603110 - B3 SINE B2 0 216 2 8 1714 2550 218 95 51 chrX 148047186 148047344 -18602952 - L1_Rod LINE L1 -724 5123 4934 8 1714 229 26 26 26 chrX 148047344 148047383 -18602913 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 8 1714 1146 51 0 0 chrX 148047383 148047521 -18602775 - B1_Mus1 SINE Alu -10 138 1 9 1714 2550 218 95 51 chrX 148047521 148048159 -18602137 - L1_Rod LINE L1 -914 4933 4294 8 1714 1860 277 23 44 chrX 148048174 148048643 -18601653 - Lx5 LINE L1 0 7050 6591 9 1714 288 0 0 0 chrX 148048643 148048675 -18601621 + (CA)n Simple_repeat Simple_repeat 2 33 0 9 1714 1860 249 31 40 chrX 148048675 148049508 -18600788 - Lx5 LINE L1 -581 6879 5863 9 1714 384 161 222 0 chrX 148049508 148049589 -18600707 - B3 SINE B2 -115 101 3 9 1714 2538 171 203 43 chrX 148049589 148050706 -18599590 - L1_Mur3 LINE L1 -3664 2213 907 9 1714 238 180 270 0 chrX 148051205 148051294 -18599002 - L1_Rod LINE L1 -1577 4270 4158 8 1714 244 227 32 54 chrX 148051298 148051391 -18598905 - L1_Rod LINE L1 -2256 3591 3501 8 1714 741 89 0 0 chrX 148051391 148051492 -18598804 - B1_Mus2 SINE Alu -1 146 46 9 1714 226 188 80 80 chrX 148051433 148051508 -18598788 - RLTR25B LTR ERVK -519 509 435 9 1714 1754 209 60 109 chrX 148051514 148051979 -18598317 - L1_Rod LINE L1 -2373 3474 3030 8 1714 394 275 175 0 chrX 148051979 148052099 -18598197 - B1_Mur1 SINE Alu -6 143 3 9 1714 1754 209 60 109 chrX 148052099 148052344 -18597952 - L1_Rod LINE L1 -2818 3029 2797 8 1714 1262 28 0 0 chrX 148052344 148052489 -18597807 - B1_Mus1 SINE Alu 0 148 4 9 1714 1754 209 60 109 chrX 148052489 148052584 -18597712 - L1_Rod LINE L1 -3051 2796 2708 8 1714 356 194 92 0 chrX 148052588 148052686 -18597610 - Lx7 LINE L1 -31 7665 7559 9 1714 6686 143 68 5 chrX 148053637 148055132 -18595164 - Lx3C LINE L1 -11 6965 5364 1 1714 210 200 36 0 chrX 148056029 148056084 -18594212 + (TATG)n Simple_repeat Simple_repeat 4 60 0 1 1714 527 292 181 65 chrX 148056105 148056365 -18593931 - B4 SINE B4 0 292 3 1 1714 1120 65 0 0 chrX 148056588 148056726 -18593570 - B1_Mm SINE Alu -9 138 1 1 1714 566 206 122 0 chrX 148056936 148057067 -18593229 + B1_Mur2 SINE Alu 1 147 -2 1 1714 1360 71 22 0 chrX 148057238 148057420 -18592876 - B2_Mm2 SINE B2 -8 187 2 1 1714 614 312 22 7 chrX 148057609 148057748 -18592548 + RSINE1 SINE B4 11 151 -14 1 1714 475 228 28 140 chrX 148057783 148057926 -18592370 + B4 SINE B4 6 132 -160 1 1714 548 349 11 70 chrX 148058009 148058194 -18592102 - B4A SINE B4 -118 174 1 1 1714 472 276 0 31 chrX 148058234 148058331 -18591965 - RSINE1 SINE B4 -28 137 44 1 1714 371 209 67 44 chrX 148058332 148058422 -18591874 - B4A SINE B4 -199 93 2 1 1714 543 318 63 115 chrX 148058878 148059053 -18591243 - MLT1A1 LTR MaLR -4 404 220 1 1714 1652 31 0 0 chrX 148059053 148059246 -18591050 + B2_Mm1a SINE B2 1 193 0 1 1714 543 318 63 115 chrX 148059246 148059496 -18590800 - MLT1A1 LTR MaLR -189 219 2 1 1714 793 244 59 35 chrX 148060116 148060371 -18589925 + Lx8 LINE L1 7204 7464 -9 1 1714 571 311 108 5 chrX 148060763 148060976 -18589320 - MIRb SINE MIR -5 263 29 1 1714 279 173 0 0 chrX 148060984 148061036 -18589260 + T-rich Low_complexity Low_complexity 1 52 0 1 1714 1022 92 43 0 chrX 148061037 148061178 -18589118 - B1_Mus1 SINE Alu 0 148 2 1 1714 1043 58 18 2 chrX 148062039 148062184 -18588112 + B1_Mus1 SINE Alu 1 148 0 1 1714 183 129 0 0 chrX 148062184 148062215 -18588081 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1714 271 212 11 32 chrX 148062256 148062331 -18587965 + B1_Mur4 SINE Alu 2 78 -39 1 1714 878 170 0 20 chrX 148062795 148062945 -18587351 - B1_Mus1 SINE Alu 0 148 2 1 1714 858 164 0 0 chrX 148063076 148063204 -18587092 + B3 SINE B2 3 130 -86 1 1714 432 0 0 0 chrX 148063316 148063364 -18586932 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 1 1714 857 118 7 14 chrX 148063365 148063503 -18586793 - B2_Mm2 SINE B2 -56 139 3 1 1714 486 300 28 56 chrX 148064014 148064194 -18586102 - MIRb SINE MIR -58 210 36 1 1714 269 51 26 0 chrX 148067949 148067988 -18582308 + (TTG)n Simple_repeat Simple_repeat 2 41 0 1 1714 420 37 0 0 chrX 148068449 148068503 -18581793 + (TGG)n Simple_repeat Simple_repeat 3 56 0 1 1714 293 258 0 0 chrX 148068938 148069000 -18581296 - RMER15 LTR ERVL -111 464 403 1 1714 698 291 61 84 chrX 148069000 148069394 -18580902 - Lx8 LINE L1 -207 7266 6882 1 1714 1162 206 116 14 chrX 148069598 148069962 -18580334 - MTD LTR MaLR -15 404 1 1 1714 1274 268 102 43 chrX 148069962 148070420 -18579876 - MTC-int LTR MaLR 0 1258 774 1 1714 398 216 29 2 chrX 148070420 148070525 -18579771 - MTD LTR MaLR 0 419 264 1 1714 1490 62 16 0 chrX 148070851 148071043 -18579253 + B2_Mm2 SINE B2 1 195 0 1 1714 552 235 9 9 chrX 148071098 148071214 -18579082 + PB1D9 SINE Alu 5 120 0 1 1714 553 205 158 0 chrX 148071303 148071430 -18578866 + B1_Mur1 SINE Alu 1 147 -2 1 1714 22 0 0 0 chrX 148071430 148071452 -18578844 + AT_rich Low_complexity Low_complexity 1 22 0 1 1714 771 216 161 49 chrX 148072100 148072325 -18577971 + L1MD LINE L1 3456 3709 -2437 1 1714 330 67 0 0 chrX 148072325 148072370 -18577926 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1714 771 216 161 49 chrX 148072370 148072596 -18577700 + L1MD LINE L1 3710 3958 -2188 1 1714 329 283 146 23 chrX 148072623 148072753 -18577543 - MLT1A LTR MaLR -13 361 216 1 1714 633 248 215 0 chrX 148072931 148073080 -18577216 + B3 SINE B2 2 182 -34 1 1714 228 358 118 19 chrX 148073051 148073262 -18577034 - Zaphod DNA Tip100 -3393 638 407 1 1714 326 306 44 54 chrX 148073266 148073470 -18576826 - Lx7 LINE L1 -416 7280 7079 1 1714 605 289 0 43 chrX 148073621 148073784 -18576512 + B3A SINE B2 5 160 -38 1 1714 768 285 24 73 chrX 148073967 148074213 -18576083 - MLT1A LTR MaLR -140 234 1 1 1714 213 200 0 0 chrX 148074355 148074372 -18575924 + polypurine Low_complexity Low_complexity 3 19 0 1 1714 1156 76 0 0 chrX 148074372 148074517 -18575779 + B1_Mus2 SINE Alu 2 146 -1 1 1714 213 200 0 0 chrX 148074517 148074539 -18575757 + polypurine Low_complexity Low_complexity 20 41 0 1 1714 460 231 166 12 chrX 148074709 148074950 -18575346 + L1MD LINE L1 4402 4679 -1467 1 1714 333 318 104 39 chrX 148074950 148075104 -18575192 + MLT1D LTR MaLR 1 164 -341 1 1714 1246 114 11 5 chrX 148075128 148075313 -18574983 + B2_Mm1t SINE B2 1 186 -7 1 1714 1067 204 254 0 chrX 148075354 148075704 -18574592 + Lx5 LINE L1 6605 7043 -7 1 1714 286 183 0 16 chrX 148075710 148075771 -18574525 + MLT1D LTR MaLR 210 269 -198 1 1714 1028 277 112 19 chrX 148076070 148076490 -18573806 - Lx7 LINE L1 -362 7334 6876 1 1714 456 278 78 0 chrX 148076509 148076624 -18573672 + RSINE1 SINE B4 3 126 -39 1 1714 684 242 144 11 chrX 148076737 148076925 -18573371 - B3 SINE B2 0 216 4 1 1714 234 279 0 0 chrX 148076979 148077047 -18573249 - ID4_ SINE ID -14 69 2 1 1714 282 320 92 44 chrX 148077198 148077404 -18572892 - HAL1 LINE L1 -1997 510 295 1 1714 260 307 128 6 chrX 148077408 148077459 -18572837 + L1M4 LINE L1 4597 4658 -1482 1 1714 240 35 0 0 chrX 148077459 148077488 -18572808 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 1714 296 258 80 24 chrX 148077488 148077576 -18572720 + L1M4 LINE L1 4659 4767 -1379 1 1714 420 310 20 20 chrX 148077576 148077724 -18572572 + B1F SINE Alu 1 148 -1 1 1714 296 261 83 23 chrX 148077724 148077763 -18572533 + L1M4 LINE L1 4759 4799 -1347 1 1714 1429 179 232 9 chrX 148077890 148078228 -18572068 - MTD LTR MaLR -11 408 1 1 1714 534 255 120 93 chrX 148078228 148078270 -18572026 + L1M4 LINE L1 4957 4990 -1156 1 1714 971 154 0 0 chrX 148078270 148078413 -18571883 + B1_Mur4 SINE Alu 1 143 -7 1 1714 534 255 120 93 chrX 148078413 148078737 -18571559 + L1M4 LINE L1 4991 5333 -813 1 1714 818 102 76 0 chrX 148078739 148078857 -18571439 + B1_Mus1 SINE Alu 5 131 -17 1 1714 1511 250 34 8 chrX 148078857 148079208 -18571088 + RMER1A Other Other 87 446 -584 1 1714 241 274 0 0 chrX 148079210 148079261 -18571035 + RMER1A Other Other 193 243 -787 1 1714 2492 246 151 18 chrX 148079263 148079986 -18570310 + RMER1A Other Other 1 819 -211 1 1714 336 234 1 12 chrX 148080066 148080179 -18570117 + L1M4 LINE L1 5348 5463 -896 1 1714 1227 40 0 20 chrX 148080348 148080499 -18569797 + B1_Mus1 SINE Alu 1 148 0 1 1714 468 0 0 0 chrX 148080518 148080570 -18569726 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1714 202 292 41 14 chrX 148080582 148080655 -18569641 + L2 LINE L2 1935 2009 -1410 1 1714 607 235 7 0 chrX 148081050 148081186 -18569110 + ERVL-B4-int LTR ERVL 2097 2233 -3481 1 1714 459 0 0 0 chrX 148081342 148081393 -18568903 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1714 1698 195 61 39 chrX 148081716 148082078 -18568218 - ORR1D2 LTR MaLR 0 370 1 1 1714 702 0 0 0 chrX 148082273 148082351 -18567945 + (TC)n Simple_repeat Simple_repeat 1 78 0 1 1714 528 144 82 0 chrX 148082398 148082495 -18567801 - MERVL_2A-int LTR ERVL -1222 4539 4435 1 1714 706 75 0 0 chrX 148082497 148082590 -18567706 + BC1_Mm scRNA scRNA 1 93 -59 1 1714 608 150 0 0 chrX 148082590 148082690 -18567606 - MERVL_2A-int LTR ERVL -1342 4419 4320 1 1714 1676 88 4 0 chrX 148082693 148082920 -18567376 - ORR1A3 LTR MaLR -8 318 91 1 1714 1387 162 21 0 chrX 148082920 148083161 -18567135 - MERVL_2A-int LTR ERVL -2497 3264 3019 1 1714 374 181 27 40 chrX 148083161 148083236 -18567060 - B1_Mus2 SINE Alu -73 74 1 1 1714 318 50 0 0 chrX 148083334 148083374 -18566922 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 1714 699 262 5 45 chrX 148083397 148083621 -18566675 - Lx8 LINE L1 -86 7387 7173 1 1714 348 326 95 45 chrX 148083669 148084006 -18566290 + L1MC LINE L1 3574 3927 -2219 1 1714 6367 88 62 1 chrX 148084004 148085164 -18565132 + L1_Mus4 LINE L1 5405 6636 0 1 1714 10411 88 40 111 chrX 148085184 148086676 -18563620 - L1_Mur1 LINE L1 -650 5236 3726 1 1714 518 174 22 0 chrX 148086676 148086768 -18563528 - RLTR1B LTR ERV1 -76 436 343 1 1714 413 150 58 0 chrX 148086772 148086853 -18563443 - RLTR1B LTR ERV1 -102 410 315 1 1714 10411 88 40 111 chrX 148086853 148087232 -18563064 - L1_Mur1 LINE L1 -650 3721 3335 1 1714 923 146 0 40 chrX 148087662 148087812 -18562484 + B1_Mur3 SINE Alu 5 148 -1 1 1714 191 91 232 18 chrX 148090298 148090354 -18559942 - L3 LINE CR1 -4396 93 26 1 1714 572 224 0 0 chrX 148091027 148091134 -18559162 + RSINE1 SINE B4 3 109 -56 1 1714 2177 280 65 120 chrX 148091185 148091743 -18558553 + L1M2 LINE L1 3533 4108 -2035 1 1714 304 280 165 8 chrX 148091743 148091756 -18558540 + B4A SINE B4 83 231 -56 1 1714 515 178 17 70 chrX 148091756 148091871 -18558425 + PB1D9 SINE Alu 12 120 0 1 1714 2177 280 65 120 chrX 148091876 148092947 -18557349 + L1M2 LINE L1 4109 5215 -928 1 1714 273 57 0 0 chrX 148092950 148092985 -18557311 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 1714 351 0 0 0 chrX 148093020 148093059 -18557237 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 1714 532 239 80 0 chrX 148093235 148093348 -18556948 + B3 SINE B2 87 208 -8 1 1714 567 232 77 22 chrX 148093459 148093640 -18556656 + Lx8 LINE L1 6968 7158 -315 1 1714 562 213 118 0 chrX 148093734 148093861 -18556435 - B1_Mur2 SINE Alu -7 142 1 1 1714 2629 118 30 12 chrX 148093944 148094347 -18555949 + Lx4A LINE L1 6640 7049 -9 1 1714 304 380 55 12 chrX 148094628 148094793 -18555503 - MTEa LTR MaLR -207 172 1 1 1714 270 56 0 0 chrX 148094854 148094890 -18555406 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1714 1211 130 16 0 chrX 148094893 148095085 -18555211 - B2_Mm2 SINE B2 0 195 1 1 1714 19219 100 30 6 chrX 148095208 148097732 -18552564 + L1Md_F LINE L1 167 2759 -3124 1 1714 3486 28 0 0 chrX 148097732 148098128 -18552168 + MTA_Mm LTR MaLR 1 396 0 1 1714 9511 24 0 0 chrX 148098128 148099226 -18551070 + MTA_Mm-int LTR MaLR 1 1098 0 1 1714 3463 28 0 2 chrX 148099226 148099623 -18550673 + MTA_Mm LTR MaLR 1 396 0 1 1714 19219 77 16 7 chrX 148099623 148100940 -18549356 + L1Md_F LINE L1 2760 4081 -1802 1 1714 436 185 74 0 chrX 148100989 148101070 -18549226 - B3 SINE B2 -25 191 105 1 1714 340 257 89 0 chrX 148101039 148101140 -18549156 - B2_Mm2 SINE B2 -71 124 15 1 1714 2089 150 17 17 chrX 148101220 148101579 -18548717 - ORR1B2 LTR MaLR -8 359 1 2 1714 474 255 13 39 chrX 148101579 148101734 -18548562 - L1M2 LINE L1 -641 5650 5500 2 1714 324 277 73 21 chrX 148101765 148101861 -18548435 + B3 SINE B2 2 102 -114 2 1714 6732 54 6 1 chrX 148101861 148102734 -18547562 + L1_Mus1 LINE L1 5688 6564 -3 2 1714 577 216 35 2 chrX 148102752 148102907 -18547389 + B3 SINE B2 27 193 -5 2 1714 1116 77 7 0 chrX 148102911 148103054 -18547242 + B1_Mus1 SINE Alu 3 146 -2 2 1714 354 196 174 0 chrX 148103137 148103229 -18547067 - L1M2 LINE L1 -863 5434 5327 2 1714 888 279 73 51 chrX 148103340 148103679 -18546617 - L1M2 LINE L1 -1635 4212 3878 2 1714 1048 106 0 0 chrX 148103679 148103820 -18546476 - B1_Mus1 SINE Alu -7 141 1 2 1714 888 282 84 54 chrX 148103820 148103985 -18546311 - L1M2 LINE L1 -2266 3877 3722 2 1714 694 286 54 0 chrX 148104010 148104178 -18546118 + ID_B1 SINE B4 5 181 -43 2 1714 318 327 107 24 chrX 148104185 148104354 -18545942 - L1M2 LINE L1 -2453 3690 3508 2 1714 615 146 0 31 chrX 148104398 148104673 -18545623 + (TG)n Simple_repeat Simple_repeat 1 266 0 2 1714 429 20 0 0 chrX 148104673 148104723 -18545573 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 1714 615 145 0 48 chrX 148104723 148104735 -18545561 + (TG)n Simple_repeat Simple_repeat 2 13 0 2 1714 583 330 10 10 chrX 148104813 148105009 -18545287 + MER20 DNA MER1_type 24 219 0 2 1714 826 234 49 19 chrX 148105103 148105308 -18544988 - B3 SINE B2 -5 211 1 2 1714 867 285 73 29 chrX 148105309 148105584 -18544712 - ORR1E LTR MaLR -71 288 2 2 1714 239 285 61 44 chrX 148105595 148105775 -18544521 + L1MC5 LINE L1 7726 7908 -53 2 1714 5087 197 36 8 chrX 148106203 148107185 -18543111 - Lx6 LINE L1 -4 7456 6448 2 1714 360 304 54 0 chrX 148107253 148107345 -18542951 - PB1D10 SINE Alu -20 97 1 2 1714 243 0 0 0 chrX 148107473 148107500 -18542796 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1714 493 225 106 17 chrX 148107588 148107744 -18542552 + MLT1A0 LTR MaLR 226 408 0 2 1714 787 274 18 18 chrX 148107746 148107965 -18542331 + MLT1A0-int LTR MaLR 2 220 -1515 2 1714 689 289 12 94 chrX 148107968 148108224 -18542072 + B4A SINE B4 56 290 -2 2 1714 269 193 64 7 chrX 148108238 148108317 -18541979 + (TA)n Simple_repeat Simple_repeat 1 86 0 2 1714 2957 128 84 6 chrX 148108317 148108805 -18541491 + RLTR11A LTR ERVK 3 528 0 2 1714 269 193 64 7 chrX 148108805 148108866 -18541430 + (TA)n Simple_repeat Simple_repeat 2 64 0 2 1714 256 319 25 17 chrX 148108866 148108984 -18541312 + RMER12 LTR ERVK 736 854 -468 2 1714 547 298 7 0 chrX 148108983 148109134 -18541162 + MLT1A0-int LTR MaLR 210 361 -1374 2 1714 820 248 69 8 chrX 148109136 148109449 -18540847 + L1M2 LINE L1 4679 5030 -1110 2 1714 330 250 0 0 chrX 148109462 148109526 -18540770 + RSINE1 SINE B4 7 70 -95 2 1714 762 137 0 8 chrX 148109840 148109958 -18540338 + ORR1D2-int LTR MaLR 1254 1370 0 2 1714 1784 212 13 24 chrX 148109958 148110330 -18539966 + ORR1D2 LTR MaLR 1 368 -2 2 1715 1248 71 71 0 chrX 148111799 148111982 -18538314 + MTB LTR MaLR 1 196 -204 2 1715 12762 48 2 2 chrX 148111982 148113654 -18536642 + L1Md_F2 LINE L1 3916 5586 -297 2 1715 7821 57 1 7 chrX 148113655 148114656 -18535640 + L1Md_F2 LINE L1 5588 6582 0 2 1715 3779 58 0 2 chrX 148114657 148115162 -18535134 + L1_Mm LINE L1 4430 4933 -950 2 1715 339 276 207 14 chrX 148116052 148116265 -18534031 - B4 SINE B4 -37 255 2 2 1715 1979 141 19 82 chrX 148116339 148116717 -18533579 - ORR1B1 LTR MaLR 0 394 41 2 1715 14070 45 5 3 chrX 148116871 148118713 -18531583 + L1Md_F3 LINE L1 3742 5586 -297 2 1715 8429 29 1 2 chrX 148118714 148119710 -18530586 + L1Md_F3 LINE L1 5588 6582 -2 2 1715 21 0 0 0 chrX 148120323 148120344 -18529952 + AT_rich Low_complexity Low_complexity 1 21 0 2 1715 287 219 47 9 chrX 148120485 148120591 -18529705 + L1MA8 LINE L1 4724 4833 -1307 2 1715 2374 157 88 4 chrX 148120847 148121333 -18528963 + RLTR11A2 LTR ERVK 1 527 0 2 1715 820 268 80 131 chrX 148121349 148121739 -18528557 + MTE2a LTR MaLR 10 379 0 2 1715 203 300 0 14 chrX 148121934 148122005 -18528291 + GA-rich Low_complexity Low_complexity 2 71 0 2 1715 889 261 152 19 chrX 148122472 148122953 -18527343 + L1MA8 LINE L1 5395 5939 -352 2 1715 3115 68 22 5 chrX 148122954 148123370 -18526926 - L1Md_F2 LINE L1 -10 6572 6150 2 1715 2991 103 8 1 chrX 148123370 148123930 -18526366 - L1Md_F LINE L1 -5534 1190 632 2 1715 17737 87 17 12 chrX 148123932 148124222 -18526074 + Lx4A LINE L1 1135 1426 -4451 2 1715 1476 63 5 0 chrX 148124222 148124412 -18525884 + B2_Mm1t SINE B2 2 192 -1 2 1715 17737 88 36 42 chrX 148124412 148125001 -18525295 + Lx4A LINE L1 1427 2057 -3820 2 1715 186 43 0 0 chrX 148125001 148125024 -18525272 + (CCA)n Simple_repeat Simple_repeat 1 23 0 2 1715 17737 88 36 42 chrX 148125024 148127256 -18523040 + Lx4A LINE L1 2058 4229 -1648 2 1715 7937 62 5 1 chrX 148127255 148128403 -18521893 - L1_Mus3 LINE L1 -2 6636 5484 2 1715 10211 102 1 81 chrX 148128397 148128853 -18521443 + Lx4A LINE L1 4214 4664 -2394 2 1715 948 50 0 0 chrX 148128853 148128973 -18521323 + B1_Mus1 SINE Alu 24 143 -5 2 1715 10211 102 1 81 chrX 148128973 148129934 -18520362 + Lx4A LINE L1 4665 5617 -1441 2 1715 3170 58 10 0 chrX 148129934 148130330 -18519966 - MTB LTR MaLR 0 400 1 2 1715 10211 121 34 27 chrX 148130330 148131514 -18518782 + Lx4A LINE L1 5612 6841 -217 2 1715 246 269 0 43 chrX 148132102 148132172 -18518124 - MLT1H LTR MaLR -259 290 224 2 1715 583 284 90 65 chrX 148132175 148132395 -18517901 + ORR1C1 LTR MaLR 1 230 -191 2 1715 504 0 0 0 chrX 148132395 148132451 -18517845 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1715 483 284 90 65 chrX 148132451 148132475 -18517821 + ORR1C1 LTR MaLR 231 251 -170 2 1715 269 126 6 0 chrX 148132655 148132705 -18517591 - L1MC3 LINE L1 -380 5964 5913 2 1715 1189 221 165 48 chrX 148132718 148132772 -18517524 + MTD LTR MaLR 1 51 -368 2 1715 1461 74 5 0 chrX 148132772 148132962 -18517334 - B2_Mm1t SINE B2 -2 191 1 2 1715 1189 221 165 48 chrX 148132962 148133282 -18517014 + MTD LTR MaLR 52 419 0 2 1715 194 0 0 37 chrX 148133333 148133360 -18516936 + (CACCC)n Simple_repeat Simple_repeat 1 26 0 2 1715 4267 66 45 29 chrX 148133396 148133992 -18516304 - L1Md_F2 LINE L1 -1 6581 5976 2 1715 3438 104 15 9 chrX 148133992 148134535 -18515761 - L1Md_F LINE L1 -5591 928 383 2 1715 1756 105 0 8 chrX 148134535 148134803 -18515493 - L1VL1 LINE L1 -6156 266 1 2 1715 219 300 29 0 chrX 148134834 148134904 -18515392 - ID2 SINE ID -11 72 1 2 1715 609 171 34 17 chrX 148135363 148135509 -18514787 + ORR1C1 LTR MaLR 212 367 -11 2 1715 27 0 0 0 chrX 148135571 148135598 -18514698 + AT_rich Low_complexity Low_complexity 1 27 0 2 1715 1422 66 6 0 chrX 148135620 148135803 -18514493 + B2_Mm1a SINE B2 2 185 -8 2 1715 216 62 77 15 chrX 148136053 148136118 -18514178 + (TA)n Simple_repeat Simple_repeat 1 69 0 2 1715 649 285 42 16 chrX 148136177 148136390 -18513906 - B3A SINE B2 -13 203 2 2 1715 240 276 25 33 chrX 148136412 148136532 -18513764 - Lx8 LINE L1 -1 7472 7354 2 1715 1329 166 11 21 chrX 148136547 148136805 -18513491 + MTC LTR MaLR 1 239 -161 2 1715 6499 73 6 14 chrX 148136805 148137717 -18512579 + L1_Mus3 LINE L1 5727 6630 -8 2 1715 1387 156 0 35 chrX 148137738 148137970 -18512326 + MTC LTR MaLR 196 419 -2 2 1715 833 201 128 0 chrX 148137991 148138170 -18512126 + Lx9 LINE L1 6370 6571 -1073 2 1715 751 158 114 7 chrX 148138170 148138310 -18511986 - RMER15 LTR ERVL 0 575 421 2 1715 234 352 28 97 chrX 148138447 148138664 -18511632 - RMER4A LTR ERVK -253 213 12 2 1715 2035 194 69 20 chrX 148138741 148139147 -18511149 - RMER15 LTR ERVL -149 426 1 2 1715 4622 165 79 52 chrX 148139162 148140198 -18510098 + Lx9 LINE L1 6581 7644 0 2 1715 23 33 0 0 chrX 148140238 148140268 -18510028 + AT_rich Low_complexity Low_complexity 1 30 0 2 1715 563 245 152 32 chrX 148140271 148140587 -18509709 + L1_Rod LINE L1 1565 1918 -3929 2 1715 1267 257 64 121 chrX 148140695 148140935 -18509361 - L1_Mur3 LINE L1 -1248 4629 4375 2 1715 192 97 0 0 chrX 148140935 148140966 -18509330 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1715 1267 253 59 153 chrX 148140966 148141515 -18508781 - L1_Mur3 LINE L1 -1505 4375 3936 2 1715 783 311 0 5 chrX 148141515 148141725 -18508571 - B3 SINE B2 -5 211 3 2 1715 1267 253 59 153 chrX 148141725 148141940 -18508356 - L1_Mur3 LINE L1 -1945 3935 3715 2 1715 719 214 0 40 chrX 148141941 148142092 -18508204 - B1_Mur1 SINE Alu 0 149 5 2 1715 400 264 160 0 chrX 148142098 148142204 -18508092 - PB1 SINE Alu -4 123 1 2 1715 183 355 28 9 chrX 148142420 148142528 -18507768 + MIRb SINE MIR 150 259 -9 2 1715 232 294 35 0 chrX 148142990 148143075 -18507221 - MIR SINE MIR -55 153 66 2 1715 23903 136 31 28 chrX 148143109 148148914 -18501382 - Lx3C LINE L1 0 6976 1165 2 1715 1598 32 0 0 chrX 148148914 148149100 -18501196 + B2_Mm1a SINE B2 2 187 -6 2 1715 1022 146 0 48 chrX 148149100 148149142 -18501154 - Lx3C LINE L1 -5820 1164 1126 2 1715 1298 109 5 30 chrX 148149143 148149341 -18500955 - B2_Mm1t SINE B2 0 193 1 2 1715 2437 169 32 31 chrX 148149349 148149926 -18500370 - Lx3C LINE L1 -5860 1124 147 2 1715 180 268 211 44 chrX 148150059 148150149 -18500147 - MIR SINE MIR -79 129 25 2 1715 880 210 91 10 chrX 148150280 148150477 -18499819 - MTEb LTR MaLR 0 379 167 2 1715 2152 206 24 59 chrX 148150589 148151131 -18499165 - Lx6 LINE L1 -363 7333 6811 2 1715 2077 174 107 66 chrX 148151153 148151665 -18498631 - RMER16 LTR ERVK 0 533 1 2 1715 2357 129 18 0 chrX 148151665 148152051 -18498245 - L1_Mur3 LINE L1 -224 5656 5264 2 1715 1352 62 84 0 chrX 148152100 148152279 -18498017 + B2_Mm2 SINE B2 2 195 0 2 1715 10085 230 80 21 chrX 148152282 148154068 -18496228 - Lx6 LINE L1 -18 7442 5561 2 1715 1455 62 10 10 chrX 148154068 148154263 -18496033 - B2_Mm2 SINE B2 0 195 1 2 1715 10085 155 133 47 chrX 148154263 148156336 -18493960 - Lx6 LINE L1 -320 5560 3278 2 1715 259 163 70 0 chrX 148156670 148156756 -18493540 - Lx4A LINE L1 0 7058 6967 2 1715 1959 159 8 3 chrX 148156750 148157135 -18493161 - MusHAL1 LINE L1 -618 2094 1708 2 1715 30061 78 58 2 chrX 148157135 148163022 -18487274 - L1Md_F2 LINE L1 -2 6580 357 2 1715 1521 169 52 9 chrX 148163025 148163354 -18486942 - Lx6 LINE L1 -2965 2915 2573 2 1715 294 58 19 0 chrX 148163350 148163402 -18486894 - L1_Mur3 LINE L1 -612 5268 5216 2 1715 4413 177 36 8 chrX 148163394 148164699 -18485597 - Lx6 LINE L1 -876 6584 5229 2 1715 2794 147 65 13 chrX 148164665 148165190 -18485106 - RMER1A Other Other -5 1025 474 2 1715 660 315 173 4 chrX 148165555 148166052 -18484244 + L1M3c LINE L1 519 1099 -5042 2 1715 264 270 76 33 chrX 148166245 148166260 -18484036 + ZP3AR Satellite Satellite 28 123 -89 2 1715 584 65 0 0 chrX 148166260 148166337 -18483959 + BC1_Mm scRNA scRNA 1 77 -75 2 1715 195 42 0 0 chrX 148166337 148166361 -18483935 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1715 1668 228 87 31 chrX 148166412 148166774 -18483522 + MTD LTR MaLR 1 380 -39 2 1715 279 0 0 0 chrX 148166774 148166805 -18483491 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2 1715 1668 228 87 31 chrX 148166805 148166831 -18483465 + MTD LTR MaLR 381 409 -10 2 1715 424 219 153 8 chrX 148166835 148166959 -18483337 + MTD-int LTR MaLR 1 142 -1116 2 1715 32 26 0 0 chrX 148166959 148166998 -18483298 + AT_rich Low_complexity Low_complexity 1 39 0 3 1715 29532 70 8 6 chrX 148167002 148168284 -18482012 - L1_Mus2 LINE L1 -2 6564 5301 3 1715 1000 66 88 0 chrX 148168284 148168420 -18481876 - B1_Mus1 SINE Alu 0 148 1 3 1715 29532 95 16 21 chrX 148168420 148170221 -18480075 - L1_Mus2 LINE L1 -583 5300 3478 3 1715 252 0 0 0 chrX 148170221 148170249 -18480047 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 3 1715 29532 95 16 21 chrX 148170249 148172440 -18477856 - L1_Mus2 LINE L1 -2406 3477 1305 3 1715 1155 68 0 7 chrX 148172440 148172588 -18477708 - B1_Mus1 SINE Alu -1 147 1 3 1715 29532 143 11 4 chrX 148172588 148173162 -18477134 - L1_Mus2 LINE L1 -4579 1304 725 3 1715 418 257 15 7 chrX 148173166 148173303 -18476993 - L1_Mus2 LINE L1 -5809 807 670 3 1715 383 172 49 44 chrX 148173379 148173481 -18476815 - L1VL1 LINE L1 -6065 357 235 3 1715 2048 228 52 32 chrX 148173482 148173984 -18476312 + MTD-int LTR MaLR 106 617 -641 2 1715 642 91 0 11 chrX 148173986 148174075 -18476221 + MTC LTR MaLR 326 413 -8 3 1715 527 264 82 103 chrX 148174080 148174274 -18476022 + B4A SINE B4 14 203 -89 3 1715 1428 229 46 16 chrX 148174274 148174581 -18475715 - MTD LTR MaLR 0 419 104 3 1715 831 140 29 14 chrX 148174665 148174803 -18475493 + B1_Mur3 SINE Alu 5 144 -5 3 1715 237 178 0 0 chrX 148174803 148174848 -18475448 + A-rich Low_complexity Low_complexity 4 48 0 3 1715 473 260 173 49 chrX 148175233 148175395 -18474901 - B3A SINE B2 -16 182 1 3 1715 1438 63 16 16 chrX 148175640 148175833 -18474463 + B2_Mm2 SINE B2 1 193 -2 3 1715 2155 126 70 0 chrX 148175978 148176335 -18473961 + RLTR40 LTR ERVK 1 382 -435 3 1715 205 88 29 0 chrX 148176374 148176408 -18473888 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 3 1715 21 36 0 0 chrX 148176865 148176893 -18473403 + AT_rich Low_complexity Low_complexity 1 28 0 3 1715 1084 181 50 52 chrX 148177054 148177434 -18472862 - RLTR9D LTR ERVK 0 420 2 3 1715 34056 54 1 4 chrX 148177434 148183547 -18466749 + L1Md_T LINE L1 1 5589 -297 3 1715 8428 34 0 2 chrX 148183547 148184616 -18465680 + L1Md_T LINE L1 5590 6585 0 3 1715 1344 119 93 52 chrX 148184616 148184864 -18465432 - RLTR9D LTR ERVK -145 258 1 3 1715 306 389 28 12 chrX 148184910 148185165 -18465131 + L1MDa LINE L1 1693 1951 -4682 3 1715 748 122 25 25 chrX 148185169 148185287 -18465009 + B1_Mur2 SINE Alu 18 135 -14 3 1715 428 320 18 31 chrX 148185287 148185588 -18464708 + Lx7 LINE L1 5785 6075 -1398 3 1715 1115 225 77 40 chrX 148185649 148185760 -18464536 - Lx8 LINE L1 -969 6504 6400 3 1715 1647 27 0 0 chrX 148185760 148185947 -18464349 + B2_Mm1t SINE B2 2 188 -5 3 1715 1115 225 77 40 chrX 148185947 148186187 -18464109 - Lx8 LINE L1 -1074 6399 6142 3 1715 333 0 0 0 chrX 148186300 148186337 -18463959 + (TTG)n Simple_repeat Simple_repeat 2 38 0 3 1715 1257 222 216 3 chrX 148186340 148186674 -18463622 + MTD LTR MaLR 15 419 0 3 1715 448 166 0 5 chrX 148186809 148186909 -18463387 - Lx8 LINE L1 -230 5926 5762 3 1715 1145 278 111 48 chrX 148186911 148187303 -18462993 - L1_Mur3 LINE L1 -205 5675 5272 3 1715 1172 68 0 7 chrX 148187303 148187450 -18462846 - B1_Mus2 SINE Alu -1 146 1 3 1715 1145 278 111 48 chrX 148187450 148187919 -18462377 - L1_Mur3 LINE L1 -609 5271 4759 3 1715 240 224 41 0 chrX 148188328 148188377 -18461919 - MT2B2 LTR ERVL -290 294 244 3 1715 852 161 53 48 chrX 148188775 148188964 -18461332 - B2_Mm2 SINE B2 -2 193 4 3 1715 1694 326 81 38 chrX 148189010 148190010 -18460286 - Lx7 LINE L1 -585 7111 6069 3 1715 2084 153 22 14 chrX 148190051 148190415 -18459881 - ORR1B2 LTR MaLR 0 367 1 3 1715 3607 162 66 5 chrX 148190415 148191064 -18459232 - ORR1B2-int LTR MaLR 0 1509 821 3 1715 2635 213 75 95 chrX 148191064 148191976 -18458320 - RLTR13B1 LTR ERVK 0 893 1 3 1715 1153 206 134 0 chrX 148191976 148192452 -18457844 - ORR1B2-int LTR MaLR -683 826 289 3 1715 1495 137 78 25 chrX 148192781 148193017 -18457279 - ORR1B2-int LTR MaLR -1210 299 46 3 1715 2891 9 0 0 chrX 148193017 148193339 -18456957 - RLTRETN_Mm LTR ERVK 0 322 1 3 1715 1495 137 78 25 chrX 148193339 148193386 -18456910 - ORR1B2-int LTR MaLR -1464 45 1 3 1715 1221 117 30 10 chrX 148193386 148193585 -18456711 - ORR1B2 LTR MaLR -2 365 163 3 1715 4496 248 46 26 chrX 148193619 148194489 -18455807 - L1_Mur3 LINE L1 -1781 4099 3191 3 1715 3319 47 0 0 chrX 148194489 148194893 -18455403 - L1_Mus1 LINE L1 0 6567 6164 3 1715 4496 248 46 26 chrX 148194893 148195045 -18455251 - L1_Mur3 LINE L1 -2690 3190 3043 3 1715 3508 43 0 20 chrX 148195045 148195496 -18454800 - L1Md_F2 LINE L1 -5 6577 6136 3 1715 4496 248 46 26 chrX 148195496 148195823 -18454473 - L1_Mur3 LINE L1 -2838 3042 2723 3 1715 1536 52 16 0 chrX 148195823 148196015 -18454281 - B2_Mm2 SINE B2 0 195 1 3 1715 4496 248 46 26 chrX 148196015 148196283 -18454013 - L1_Mur3 LINE L1 -3158 2722 2450 3 1715 5683 160 58 5 chrX 148197231 148198255 -18452041 + MERVL_2A-int LTR ERVL 2445 3522 -2239 3 1715 8199 106 43 4 chrX 148198267 148199553 -18450743 + Lx4A LINE L1 5717 7031 -27 3 1715 1836 143 154 59 chrX 148199554 148200028 -18450268 + MERVL_2A-int LTR ERVL 5112 5630 -131 3 1715 239 184 20 0 chrX 148200045 148200094 -18450202 + ORR1A3-int LTR MaLR 590 639 -1324 3 1715 275 120 60 0 chrX 148200096 148200146 -18450150 + MERVL_2A-int LTR ERVL 5709 5761 0 3 1715 2397 180 10 72 chrX 148200146 148200656 -18449640 + MT2A LTR ERVL 1 478 -55 3 1715 281 197 13 0 chrX 148200656 148200732 -18449564 + L1_Mur3 LINE L1 3667 3743 -2137 3 1715 804 252 55 19 chrX 148200865 148201224 -18449072 + Lx9 LINE L1 5508 5974 -1670 3 1715 493 255 78 0 chrX 148201426 148201567 -18448729 + Lx9 LINE L1 7055 7206 -438 3 1715 533 165 0 11 chrX 148201573 148201665 -18448631 + B1_Mur2 SINE Alu 59 149 0 3 1715 788 259 4 54 chrX 148201675 148201936 -18448360 + Lx9 LINE L1 7225 7472 -172 3 1715 496 191 0 0 chrX 148201963 148202047 -18448249 - Lx7 LINE L1 -1018 6678 6595 3 1715 252 282 14 27 chrX 148202076 148202149 -18448147 - ID SINE ID -150 74 3 3 1715 919 179 0 0 chrX 148202295 148202435 -18447861 - B1_Mus2 SINE Alu -5 142 3 3 1715 404 303 60 56 chrX 148202908 148203329 -18446967 + L1M5 LINE L1 2350 2768 -3378 3 1715 973 17 0 0 chrX 148203329 148203446 -18446850 + B1_Mus2 SINE Alu 29 145 -2 3 1715 216 0 0 0 chrX 148203446 148203470 -18446826 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1715 324 0 0 0 chrX 148203602 148203638 -18446658 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 3 1715 858 196 0 0 chrX 148203639 148203782 -18446514 - B1_Mur3 SINE Alu -6 143 1 3 1715 271 312 0 0 chrX 148203790 148203867 -18446429 - ID4 SINE ID -2 81 5 3 1715 209 33 33 0 chrX 148203883 148203913 -18446383 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 1715 861 173 7 28 chrX 148203913 148204056 -18446240 - B1_Mur2 SINE Alu -8 141 2 3 1715 215 320 51 0 chrX 148204128 148204206 -18446090 - ID4_ SINE ID 0 83 2 3 1715 319 227 100 30 chrX 148204226 148204326 -18445970 - PB1D10 SINE Alu -1 116 10 3 1715 205 149 43 0 chrX 148204518 148204565 -18445731 + A-rich Low_complexity Low_complexity 1 49 0 3 1715 505 258 88 49 chrX 148204694 148204898 -18445398 + B3 SINE B2 2 213 -3 3 1715 1052 301 73 55 chrX 148205055 148205837 -18444459 + Lx8 LINE L1 5649 6408 -1065 3 1715 569 250 118 0 chrX 148205843 148205987 -18444309 - MTE-int LTR MaLR -1345 235 75 3 1715 248 272 0 21 chrX 148205988 148206082 -18444214 + L1M5 LINE L1 2968 3059 -3087 3 1715 287 312 42 31 chrX 148206196 148206231 -18444065 + B4 SINE B4 52 148 -144 3 1715 332 213 16 0 chrX 148206231 148206292 -18444004 + B1_Mur3 SINE Alu 2 63 -86 3 1715 4657 186 102 68 chrX 148206293 148206911 -18443385 - L1_Rod LINE L1 -2652 3195 2543 3 1715 685 181 99 30 chrX 148206911 148207042 -18443254 - B1_Mus1 SINE Alu -7 141 2 3 1715 4657 186 102 68 chrX 148207042 148207314 -18442982 - L1_Rod LINE L1 -3305 2542 2285 3 1715 944 151 39 11 chrX 148207314 148207495 -18442801 + B2_Mm2 SINE B2 2 187 -8 3 1715 4657 186 102 68 chrX 148207495 148208077 -18442219 - L1_Rod LINE L1 -3563 2284 1672 3 1715 997 155 10 88 chrX 148208083 148208113 -18442183 + ORR1D1 LTR MaLR 1 27 -347 3 1715 1132 126 44 0 chrX 148208113 148208295 -18442001 + B2_Mm2 SINE B2 2 191 -4 3 1715 997 155 10 88 chrX 148208295 148208469 -18441827 + ORR1D1 LTR MaLR 28 189 -185 3 1715 224 200 33 16 chrX 148208470 148208531 -18441765 + (TCTG)n Simple_repeat Simple_repeat 3 64 0 3 1715 907 195 9 61 chrX 148208531 148208702 -18441594 + ORR1D1 LTR MaLR 164 323 -51 3 1715 924 74 13 40 chrX 148208702 148208847 -18441449 + B1_Mus1 SINE Alu 1 147 -1 3 1715 183 80 0 0 chrX 148208868 148208893 -18441403 + (TA)n Simple_repeat Simple_repeat 1 25 0 3 1715 272 123 6 15 chrX 148208942 148209008 -18441288 - Lx7 LINE L1 -1 7695 7643 3 1715 1871 209 32 5 chrX 148209008 148209441 -18440855 - MYSERV-int LTR ERVK -432 6118 5674 3 1715 938 184 22 5 chrX 148209437 148209649 -18440647 + MYSERV-int LTR ERVK 6104 6310 -240 3 1715 2783 77 61 0 chrX 148209649 148210026 -18440270 - MTB LTR MaLR 0 400 1 3 1715 762 239 73 15 chrX 148210026 148210072 -18440224 + MYSERV-int LTR ERVK 2091 2145 -181 3 1715 881 148 36 18 chrX 148210115 148210280 -18440016 + RLTR15 LTR ERVK 192 359 0 3 1715 1637 176 23 71 chrX 148210280 148210719 -18439577 - Lx7 LINE L1 -48 7648 7231 3 1715 232 97 0 0 chrX 148210719 148210750 -18439546 + MT2_Mm LTR ERVL 1 31 -462 3 1715 26 50 0 0 chrX 148211174 148211214 -18439082 + AT_rich Low_complexity Low_complexity 1 40 0 3 1715 320 145 0 0 chrX 148211221 148211283 -18439013 - Lx6 LINE L1 -6 7454 7393 3 1715 534 147 0 0 chrX 148211285 148211360 -18438936 - B1_Mus1 SINE Alu -55 93 19 3 1715 1474 38 0 26 chrX 148211358 148211550 -18438746 + B2_Mm1a SINE B2 6 192 -1 3 1715 344 217 60 0 chrX 148211566 148211649 -18438647 - Lx6 LINE L1 -57 7403 7316 3 1715 997 76 7 53 chrX 148211656 148211808 -18438488 + B1_Mus2 SINE Alu 2 146 -1 3 1715 203 179 0 0 chrX 148211809 148211848 -18438448 + A-rich Low_complexity Low_complexity 1 39 0 3 1715 257 250 25 62 chrX 148211848 148211929 -18438367 - Lx6 LINE L1 -136 7324 7247 3 1715 23 0 0 0 chrX 148211943 148211966 -18438330 + AT_rich Low_complexity Low_complexity 1 23 0 3 1715 1332 106 0 5 chrX 148211998 148212187 -18438109 - B2_Mm2 SINE B2 -7 188 1 3 1715 924 93 0 0 chrX 148212213 148212331 -18437965 + 5S rRNA rRNA 1 118 -3 3 1715 837 0 0 0 chrX 148212331 148212424 -18437872 + (GAAAA)n Simple_repeat Simple_repeat 3 95 0 3 1715 844 155 7 45 chrX 148212433 148212588 -18437708 + B1_Mur2 SINE Alu 1 149 0 3 1715 675 196 0 0 chrX 148212843 148212955 -18437341 + B3 SINE B2 1 112 -104 3 1715 319 217 144 52 chrX 148212922 148213019 -18437277 + PB1D10 SINE Alu 10 115 -2 3 1715 296 324 117 49 chrX 148213884 148214209 -18436087 - MLT1B LTR MaLR -130 480 134 3 1715 589 303 28 0 chrX 148214367 148214512 -18435784 + RSINE1 SINE B4 3 151 -14 3 1715 563 292 75 17 chrX 148215270 148215444 -18434852 + MLT1N2 LTR MaLR 367 550 -12 3 1715 1251 41 0 0 chrX 148215838 148215985 -18434311 + B1_Mus2 SINE Alu 1 147 0 3 1715 341 319 11 11 chrX 148216115 148216210 -18434086 - MLT1B LTR MaLR -287 103 9 3 1715 216 111 0 0 chrX 148216407 148216443 -18433853 + (TTGG)n Simple_repeat Simple_repeat 4 39 0 3 1715 641 253 13 20 chrX 148216443 148216592 -18433704 - B1_Mur3 SINE Alu -1 148 1 3 1715 325 286 161 0 chrX 148217473 148217585 -18432711 + B1F SINE Alu 1 130 -19 3 1715 861 73 89 0 chrX 148217909 148218032 -18432264 + B1_Mus2 SINE Alu 14 147 0 3 1715 742 187 0 0 chrX 148218493 148218627 -18431669 - L1_Rod LINE L1 -102 5745 5612 3 1715 644 295 26 0 chrX 148218668 148218858 -18431438 + Lx8 LINE L1 7154 7348 -125 3 1715 682 159 17 26 chrX 148218860 148218976 -18431320 + B1_Mur3 SINE Alu 35 149 0 4 1715 288 0 0 0 chrX 148219082 148219114 -18431182 + (TTTTA)n Simple_repeat Simple_repeat 4 35 0 4 1715 1263 97 11 0 chrX 148219114 148219290 -18431006 - B2_Mm1t SINE B2 -14 179 2 4 1715 1100 49 27 27 chrX 148219295 148219441 -18430855 - B1_Mus1 SINE Alu -1 147 2 4 1715 1558 246 39 22 chrX 148219693 148220055 -18430241 + MER21B LTR ERV1 14 381 -482 4 1715 969 84 0 0 chrX 148220054 148220185 -18430111 + B1_Mus1 SINE Alu 18 148 0 4 1715 963 316 139 24 chrX 148220271 148220644 -18429652 + MER21B LTR ERV1 448 863 0 4 1715 188 35 35 0 chrX 148220674 148220703 -18429593 + (TTG)n Simple_repeat Simple_repeat 1 30 0 4 1715 226 184 0 0 chrX 148220883 148220932 -18429364 + L1ME2z LINE L1 6391 6439 -5 4 1715 1179 62 0 0 chrX 148220934 148221079 -18429217 + B1_Mus2 SINE Alu 2 146 -1 4 1715 219 188 88 18 chrX 148221381 148221495 -18428801 + (TATAA)n Simple_repeat Simple_repeat 3 124 0 4 1715 782 229 39 24 chrX 148221495 148221701 -18428595 - Tigger5 DNA MER2_type -187 2219 2011 4 1715 1211 54 0 13 chrX 148221714 148221863 -18428433 - B1_Mus1 SINE Alu -1 147 1 4 1715 551 239 35 14 chrX 148221865 148222009 -18428287 - Tigger5 DNA MER2_type -646 1760 1614 4 1715 602 266 14 41 chrX 148222006 148222151 -18428145 - RSINE1 SINE B4 -20 145 5 4 1715 1001 126 197 17 chrX 148222235 148222413 -18427883 - B3 SINE B2 -6 210 1 4 1715 528 369 70 63 chrX 148222422 148222561 -18427735 - Tigger5 DNA MER2_type -1946 460 312 4 1715 335 85 0 33 chrX 148222561 148222622 -18427674 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 4 1715 528 369 70 63 chrX 148222622 148222939 -18427357 - Tigger5 DNA MER2_type -2095 311 1 4 1715 242 343 30 0 chrX 148223078 148223145 -18427151 - ID SINE ID -154 70 2 4 1715 255 31 0 0 chrX 148223423 148223455 -18426841 + (CACCC)n Simple_repeat Simple_repeat 5 36 0 4 1715 261 0 0 0 chrX 148223691 148223720 -18426576 + (TTC)n Simple_repeat Simple_repeat 2 30 0 4 1715 198 0 0 0 chrX 148223720 148223742 -18426554 + (TTA)n Simple_repeat Simple_repeat 1 22 0 4 1715 1072 297 111 51 chrX 148223815 148224265 -18426031 - MLT1E2 LTR MaLR -145 482 6 4 1715 357 271 50 25 chrX 148225010 148225131 -18425165 + RMER10B LTR ERVL 274 397 -1 4 1715 1341 101 5 0 chrX 148225236 148225424 -18424872 - B2_Mm1t SINE B2 -4 189 1 4 1715 24 77 0 0 chrX 148225434 148225486 -18424810 + AT_rich Low_complexity Low_complexity 1 52 0 4 1715 3181 29 39 0 chrX 148225588 148225969 -18424327 - MTA_Mm LTR MaLR 0 396 1 4 1715 628 165 109 8 chrX 148226022 148226150 -18424146 - B1_Mus1 SINE Alu -3 145 5 4 1715 444 37 0 0 chrX 148226324 148226378 -18423918 + (TTCC)n Simple_repeat Simple_repeat 3 56 0 4 1715 373 238 25 12 chrX 148226399 148226480 -18423816 + ID4 SINE ID 2 83 0 4 1715 180 163 0 0 chrX 148226853 148226896 -18423400 + T-rich Low_complexity Low_complexity 1 43 0 4 1715 1204 61 0 0 chrX 148226896 148227044 -18423252 - B1_Mus1 SINE Alu 0 148 1 4 1715 395 226 0 23 chrX 148227084 148227170 -18423126 + PB1 SINE Alu 36 119 -8 4 1715 322 314 49 21 chrX 148227316 148227459 -18422837 + B1F SINE Alu 3 149 0 4 1715 398 229 128 0 chrX 148227466 148227575 -18422721 + RSINE1 SINE B4 10 132 -33 4 1715 411 349 40 71 chrX 148227816 148228069 -18422227 + MER102a DNA MER1_type 1 245 -85 4 1715 841 154 49 0 chrX 148228957 148229100 -18421196 - B1_Mur4 SINE Alu 0 150 1 4 1715 988 72 28 21 chrX 148229215 148229228 -18421068 - B1_Mm SINE Alu -2 145 135 4 1715 216 0 0 0 chrX 148229228 148229252 -18421044 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 4 1715 988 72 28 21 chrX 148229252 148229380 -18420916 - B1_Mm SINE Alu -13 134 3 4 1715 244 272 10 89 chrX 148229386 148229487 -18420809 + MER112 DNA MER1_type 118 210 -51 4 1715 1617 212 46 8 chrX 148229571 148229961 -18420335 - L1_Rod LINE L1 -1446 4401 3997 4 1715 233 147 206 0 chrX 148229956 148230024 -18420272 - Lx6 LINE L1 -535 6925 6844 4 1715 352 91 25 25 chrX 148230031 148230110 -18420186 + (TCTCTG)n Simple_repeat Simple_repeat 2 80 0 4 1715 874 244 265 6 chrX 148230143 148230494 -18419802 - RMER15 LTR ERVL -112 463 22 4 1715 1099 130 176 5 chrX 148230552 148230745 -18419551 + URR1A DNA MER1_type 1 226 0 4 1715 1096 95 0 0 chrX 148230782 148230929 -18419367 - B1_Mus2 SINE Alu 0 147 1 4 1715 505 216 5 2 chrX 148231186 148231294 -18419002 + PB1D10 SINE Alu 1 110 -10 4 1715 1989 280 88 49 chrX 148231432 148232124 -18418172 + MTEa-int LTR MaLR 859 1577 -3 4 1715 494 326 0 65 chrX 148232127 148232281 -18418015 + MTEa LTR MaLR 1 144 -235 4 1715 281 310 0 10 chrX 148232320 148232421 -18417875 + CT-rich Low_complexity Low_complexity 1 100 0 4 1715 441 232 0 111 chrX 148232440 148232566 -18417730 - MTEa LTR MaLR -267 112 1 4 1715 186 43 0 0 chrX 148232999 148233022 -18417274 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 1715 276 30 0 0 chrX 148235980 148236013 -18414283 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1715 594 301 82 44 chrX 148236124 148236497 -18413799 - L1MC LINE L1 -2076 5806 5423 4 1715 430 298 73 5 chrX 148236646 148236865 -18413431 + L1M5 LINE L1 4458 4691 -1455 4 1715 226 250 186 29 chrX 148239624 148239694 -18410602 + MIRb SINE MIR 93 173 -95 4 1715 29 0 0 0 chrX 148241541 148241570 -18408726 + AT_rich Low_complexity Low_complexity 1 29 0 4 1715 240 232 35 35 chrX 148241918 148242034 -18408262 - L1MC5 LINE L1 -389 7572 7457 4 1716 929 96 154 0 chrX 148243724 148243880 -18406416 + B2_Mm2 SINE B2 2 181 -14 4 1716 1097 111 32 27 chrX 148243904 148244090 -18406206 + B2_Mm2 SINE B2 1 187 -8 4 1716 25 41 0 20 chrX 148244135 148244171 -18406125 + AT_rich Low_complexity Low_complexity 1 36 0 4 1716 698 242 122 32 chrX 148244171 148244359 -18405937 + B3 SINE B2 1 205 -11 4 1716 25 41 0 20 chrX 148244359 148244372 -18405924 + AT_rich Low_complexity Low_complexity 1 13 0 4 1716 216 381 23 35 chrX 148244605 148244692 -18405604 - PB1 SINE Alu -33 94 9 4 1716 1008 71 50 0 chrX 148244818 148244959 -18405337 - B1_Mus1 SINE Alu 0 148 1 4 1716 966 72 39 19 chrX 148245047 148245203 -18405093 + L1_Mus1 LINE L1 6409 6567 0 4 1716 431 246 123 0 chrX 148245298 148245436 -18404860 - MER5A DNA MER1_type -1 188 34 4 1716 243 182 0 0 chrX 148245556 148245600 -18404696 - Lx8 LINE L1 -5 7468 7425 4 1716 1233 268 51 7 chrX 148245670 148245963 -18404333 - Lx8 LINE L1 -200 7273 6968 4 1716 1630 205 158 125 chrX 148245970 148246323 -18403973 - RMER19A LTR ERVK -12 725 336 4 1716 567 0 0 0 chrX 148246323 148246386 -18403910 + (CTG)n Simple_repeat Simple_repeat 2 64 0 4 1716 1630 205 158 125 chrX 148246386 148246734 -18403562 - RMER19A LTR ERVK -402 335 1 4 1716 362 102 330 20 chrX 148246738 148246838 -18403458 - Lx8 LINE L1 -519 6954 6824 4 1716 361 296 241 8 chrX 148246884 148247146 -18403150 - L1MC5 LINE L1 -602 7359 7037 4 1716 357 309 102 31 chrX 148247285 148247412 -18402884 - B4 SINE B4 -156 136 1 4 1716 523 213 36 27 chrX 148247422 148247533 -18402763 - B1F SINE Alu -37 112 1 4 1716 485 265 115 18 chrX 148247587 148247752 -18402544 - B3A SINE B2 -17 181 1 4 1716 341 271 33 25 chrX 148247907 148248028 -18402268 - L1MC5 LINE L1 -1086 6875 6754 4 1716 427 271 0 10 chrX 148248591 148248688 -18401608 - PB1D10 SINE Alu -21 96 1 4 1716 31 26 0 0 chrX 148249213 148249251 -18401045 + AT_rich Low_complexity Low_complexity 1 38 0 4 1716 226 304 163 0 chrX 148249302 148249394 -18400902 + MIRb SINE MIR 82 188 -80 4 1716 506 313 54 7 chrX 148249439 148249587 -18400709 + RSINE1 SINE B4 1 155 -10 4 1716 22 0 0 0 chrX 148249800 148249822 -18400474 + AT_rich Low_complexity Low_complexity 1 22 0 4 1716 180 0 0 0 chrX 148250547 148250567 -18399729 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1716 529 236 102 0 chrX 148250791 148250918 -18399378 - B1F SINE Alu 0 149 10 4 1716 1036 91 118 24 chrX 148250928 148251097 -18399199 - B2_Mm2 SINE B2 -10 185 1 4 1716 283 258 141 8 chrX 148251413 148251534 -18398762 - L1_Rod LINE L1 -649 5198 5062 4 1716 365 277 32 0 chrX 148251677 148251771 -18398525 - B3 SINE B2 -9 207 111 4 1716 1080 89 0 6 chrX 148251799 148251957 -18398339 + B2_Mm2 SINE B2 39 195 0 4 1716 201 312 0 0 chrX 148252061 148252109 -18398187 - L2c LINE L2 -245 3142 3095 4 1716 681 71 0 0 chrX 148252712 148252810 -18397486 - L1Md_F2 LINE L1 -11 6571 6474 4 1716 1125 49 28 0 chrX 148252949 148253092 -18397204 + B1_Mus1 SINE Alu 2 148 0 4 1716 1256 89 44 6 chrX 148253108 148253288 -18397008 - B2_Mm2 SINE B2 -7 188 2 4 1716 243 0 0 0 chrX 148253298 148253325 -18396971 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1716 710 200 0 0 chrX 148253356 148253486 -18396810 - B1_Mur3 SINE Alu 0 149 20 4 1716 1209 107 37 16 chrX 148254123 148254313 -18395983 - B2_Mm2 SINE B2 -1 194 1 4 1716 1129 55 14 0 chrX 148254369 148254514 -18395782 - B1_Mus1 SINE Alu 0 148 2 4 1716 646 222 40 40 chrX 148255020 148255170 -18395126 - B1_Mur4 SINE Alu 0 150 1 4 1716 721 275 50 15 chrX 148255296 148255565 -18394731 - Lx8 LINE L1 -134 7339 7049 4 1716 215 271 85 0 chrX 148255828 148255887 -18394409 - PB1 SINE Alu -17 110 47 4 1716 341 235 176 0 chrX 148255927 148256029 -18394267 - PB1D9 SINE Alu 0 120 1 4 1716 301 278 55 11 chrX 148256036 148256127 -18394169 - MER5A1 DNA MER1_type -2 164 70 4 1716 198 0 0 0 chrX 148256243 148256265 -18394031 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 1716 522 103 0 0 chrX 148256288 148256366 -18393930 + (TG)n Simple_repeat Simple_repeat 2 79 0 4 1716 480 294 36 29 chrX 148256422 148256562 -18393734 - B4A SINE B4 -151 141 1 4 1716 255 31 0 0 chrX 148256747 148256779 -18393517 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 4 1716 1126 63 0 0 chrX 148256784 148256926 -18393370 - B1_Mus2 SINE Alu -1 146 5 4 1716 248 345 42 103 chrX 148257777 148257942 -18392354 + MLT1N2 LTR MaLR 352 506 -56 4 1716 313 302 103 10 chrX 148258179 148258276 -18392020 + PB1D9 SINE Alu 9 114 -6 4 1716 513 276 258 26 chrX 148258282 148258584 -18391712 - L1MC1 LINE L1 -85 6248 5877 5 1716 328 202 174 9 chrX 148258658 148258773 -18391523 - L1MC1 LINE L1 -427 5906 5773 5 1716 600 239 105 25 chrX 148258830 148259078 -18391218 - L1MC1 LINE L1 -776 5557 5290 5 1716 1143 54 0 20 chrX 148259078 148259229 -18391067 - B1_Mus1 SINE Alu 0 148 1 5 1716 600 272 77 82 chrX 148259229 148259727 -18390569 - L1MC1 LINE L1 -857 5289 4795 5 1716 355 177 298 77 chrX 148259756 148259964 -18390332 - L1MC1 LINE L1 -1670 4476 4223 5 1716 24 32 0 0 chrX 148260031 148260062 -18390234 + AT_rich Low_complexity Low_complexity 1 31 0 5 1716 454 295 97 95 chrX 148260182 148260613 -18389683 + L1M2 LINE L1 4908 5336 -544 5 1716 984 174 79 0 chrX 148260613 148260803 -18389493 - B3 SINE B2 -7 209 5 5 1716 312 295 97 95 chrX 148260803 148260899 -18389397 + L1M2 LINE L1 5337 5436 -444 5 1716 909 256 44 40 chrX 148261007 148261347 -18388949 + L1MA8 LINE L1 5469 5848 -736 5 1716 233 293 0 0 chrX 148261345 148261427 -18388869 - L1M2 LINE L1 -1118 5727 5646 5 1716 22 0 0 0 chrX 148261433 148261455 -18388841 + AT_rich Low_complexity Low_complexity 1 22 0 5 1716 1616 26 0 5 chrX 148261460 148261651 -18388645 - B2_Mm1a SINE B2 -2 191 2 5 1716 277 259 85 14 chrX 148261667 148261808 -18388488 - L1M2 LINE L1 -2964 3881 3731 5 1716 4053 184 80 7 chrX 148261820 148262586 -18387710 - Lx5 LINE L1 0 7050 6229 5 1716 604 280 122 40 chrX 148262638 148263149 -18387147 - L1M2 LINE L1 -3131 3714 3166 5 1716 2108 52 11 0 chrX 148263259 148263527 -18386769 - L1Md_F2 LINE L1 -1 6581 6311 5 1716 360 297 55 27 chrX 148263532 148263879 -18386417 - L1M2 LINE L1 -4244 2605 2245 5 1716 360 0 0 0 chrX 148264046 148264086 -18386210 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1716 189 121 0 0 chrX 148264089 148264122 -18386174 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 5 1716 274 136 220 0 chrX 148264541 148264600 -18385696 - L1MD LINE L1 -862 5284 5213 5 1716 22 0 0 0 chrX 148264642 148264664 -18385632 + AT_rich Low_complexity Low_complexity 1 22 0 5 1716 746 256 51 17 chrX 148264671 148264846 -18385450 - B3A SINE B2 -16 182 2 5 1716 297 0 0 0 chrX 148265026 148265059 -18385237 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1716 580 230 142 26 chrX 148265120 148265352 -18384944 + L1MA8 LINE L1 5999 6257 -34 5 1716 476 189 46 19 chrX 148265411 148265519 -18384777 + B1_Mus1 SINE Alu 34 144 -4 5 1716 564 231 29 0 chrX 148265545 148265649 -18384647 + B1_Mur2 SINE Alu 10 116 -33 5 1716 447 319 0 40 chrX 148265717 148265841 -18384455 + RSINE1 SINE B4 45 163 -2 5 1716 550 235 42 12 chrX 148266321 148266489 -18383807 - L1MD LINE L1 -1442 4704 4532 5 1716 594 307 111 27 chrX 148266524 148266785 -18383511 - B4A SINE B4 -7 285 3 5 1716 329 291 70 56 chrX 148266786 148267001 -18383295 - L1MD LINE L1 -1877 4269 4052 5 1716 294 29 0 0 chrX 148267942 148267977 -18382319 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1716 1110 71 0 0 chrX 148267977 148268117 -18382179 - B1_Mus1 SINE Alu -8 140 1 5 1716 668 74 179 16 chrX 148268135 148268258 -18382038 + B2_Mm1t SINE B2 37 179 -14 5 1716 316 143 9 18 chrX 148268310 148268374 -18381922 + B2_Mm2 SINE B2 48 114 -102 5 1716 423 0 0 0 chrX 148268385 148268432 -18381864 + (CATA)n Simple_repeat Simple_repeat 4 50 0 5 1716 1022 252 79 63 chrX 148268530 148268847 -18381449 - MTC LTR MaLR -53 368 47 5 1716 301 256 81 0 chrX 148268896 148268982 -18381314 - PB1D7 SINE Alu -27 93 1 5 1716 350 285 179 0 chrX 148269123 148269246 -18381050 + B3 SINE B2 65 209 -7 5 1716 270 264 0 0 chrX 148269985 148270038 -18380258 + ID4 SINE ID 31 83 0 5 1716 1003 160 51 19 chrX 148270851 148271067 -18379229 - L1M3 LINE L1 -692 5476 5254 5 1716 502 180 111 58 chrX 148271086 148271257 -18379039 + L1MB1 LINE L1 5874 6053 -115 5 1716 253 275 264 0 chrX 148271271 148271362 -18378934 + PB1D10 SINE Alu 1 115 -2 5 1716 612 190 73 49 chrX 148271399 148271604 -18378692 + L1MA10 LINE L1 6106 6315 -19 5 1716 245 328 0 0 chrX 148272537 148272604 -18377692 + CT-rich Low_complexity Low_complexity 1 67 0 5 1716 524 207 17 25 chrX 148272674 148272793 -18377503 + PB1D9 SINE Alu 2 119 -1 5 1716 204 222 101 90 chrX 148273587 148273676 -18376620 - MIRc SINE MIR -78 190 101 5 1716 212 352 28 0 chrX 148273825 148273896 -18376400 - MIRb SINE MIR -182 86 14 5 1716 187 103 51 0 chrX 148274212 148274251 -18376045 + CT-rich Low_complexity Low_complexity 5 45 0 5 1716 224 354 111 0 chrX 148275184 148275283 -18375013 - B4A SINE B4 -100 192 83 5 1716 366 274 0 0 chrX 148275663 148275736 -18374560 + ID2 SINE ID 6 78 -5 5 1716 375 264 75 0 chrX 148276036 148276142 -18374154 - MER2B DNA MER2_type -73 263 150 5 1716 326 305 62 10 chrX 148276312 148276408 -18373888 - ORR1E LTR MaLR -258 101 1 5 1716 539 263 119 28 chrX 148276597 148276773 -18373523 + B3 SINE B2 1 192 -24 5 1716 2223 103 0 100 chrX 148278082 148278493 -18371803 - Lx LINE L1 -12 6642 6273 5 1716 1308 198 73 36 chrX 148278650 148279007 -18371289 - ORR1D1 LTR MaLR 0 374 5 5 1716 224 304 71 0 chrX 148279028 148279084 -18371212 - ID_B1 SINE B4 -83 141 82 5 1716 234 279 73 0 chrX 148279193 148279261 -18371035 - ID4 SINE ID -8 75 3 5 1716 472 231 52 61 chrX 148279510 148279625 -18370671 + B1_Mur2 SINE Alu 21 134 -15 5 1716 408 306 76 53 chrX 148279656 148279787 -18370509 + RSINE1 SINE B4 30 163 -2 5 1716 235 309 70 64 chrX 148279975 148280162 -18370134 + B2_Mm2 SINE B2 5 192 -3 5 1716 563 269 7 54 chrX 148280254 148280403 -18369893 + B1_Mur1 SINE Alu 2 143 -6 5 1716 1160 68 0 0 chrX 148281194 148281340 -18368956 - B1_Mm SINE Alu 0 147 2 5 1716 259 62 0 0 chrX 148281431 148281463 -18368833 + L1VL2 LINE L1 534 565 -5770 5 1716 298 50 0 0 chrX 148281467 148281507 -18368789 - B1_Mus2 SINE Alu -106 41 2 5 1716 212 267 105 95 chrX 148281880 148281975 -18368321 + PB1D9 SINE Alu 10 105 -15 5 1716 539 266 107 7 chrX 148282155 148282295 -18368001 + ID_B1 SINE B4 68 221 -3 5 1716 324 324 39 0 chrX 148282325 148282427 -18367869 + PB1D10 SINE Alu 1 106 -11 5 1716 415 276 0 0 chrX 148282757 148282844 -18367452 - ORR1D1-int LTR MaLR -326 1044 958 5 1716 3513 244 29 16 chrX 148282832 148283658 -18366638 - ORR1D1-int LTR MaLR -532 838 2 5 1716 681 234 69 74 chrX 148283659 148283876 -18366420 - ORR1D1 LTR MaLR 0 374 159 5 1716 601 209 50 36 chrX 148284298 148284437 -18365859 + B1_Mur1 SINE Alu 2 142 -7 5 1716 1639 171 99 9 chrX 148284609 148284952 -18365344 - ORR1C1 LTR MaLR -2 376 3 5 1716 21 36 0 0 chrX 148285705 148285733 -18364563 + AT_rich Low_complexity Low_complexity 1 28 0 5 1716 654 249 12 30 chrX 148285763 148285929 -18364367 + B3 SINE B2 52 214 -2 5 1716 389 211 17 17 chrX 148287252 148287368 -18362928 - Lx3C LINE L1 -4 6972 6857 5 1716 714 230 0 41 chrX 148289824 148289969 -18360327 - B1_Mur2 SINE Alu -5 144 6 5 1716 389 19 38 0 chrX 148290058 148290111 -18360185 + (GTTTG)n Simple_repeat Simple_repeat 2 56 0 5 1716 1082 90 0 0 chrX 148290111 148290255 -18360041 - B1_Mus2 SINE Alu -2 145 2 5 1716 222 52 0 158 chrX 148294102 148294216 -18356080 + (GCCTG)n Simple_repeat Simple_repeat 3 98 0 5 1716 258 277 95 12 chrX 148295318 148295402 -18354894 + B1_Mur2 SINE Alu 2 92 -57 5 1716 549 106 9 55 chrX 148295442 148295552 -18354744 - L1_Mus2 LINE L1 0 6566 6462 5 1716 565 27 0 0 chrX 148296222 148296296 -18354000 - B2_Mm1t SINE B2 0 193 120 5 1716 498 224 27 27 chrX 148296340 148296487 -18353809 + Lx6 LINE L1 7288 7434 -26 5 1716 1030 111 0 0 chrX 148296627 148296771 -18353525 + B1_Mus1 SINE Alu 4 147 -1 5 1716 774 32 0 0 chrX 148297615 148297708 -18352588 + (TCTCC)n Simple_repeat Simple_repeat 3 95 0 5 1716 392 97 0 0 chrX 148298060 148298122 -18352174 + L1_Mus2 LINE L1 6499 6560 -6 5 1716 204 40 0 0 chrX 148298241 148298266 -18352030 + (CCA)n Simple_repeat Simple_repeat 1 25 0 5 1716 270 56 0 0 chrX 148298930 148298966 -18351330 + (T)n Simple_repeat Simple_repeat 1 36 0 5 1716 224 154 38 19 chrX 148299413 148299466 -18350830 + PB1D9 SINE Alu 54 107 -13 5 1716 718 76 19 9 chrX 148300619 148300725 -18349571 - B2_Mm2 SINE B2 -88 107 1 5 1716 214 325 150 0 chrX 148301241 148301321 -18348975 - B1F SINE Alu -17 132 41 5 1716 2477 60 3 12 chrX 148301323 148301662 -18348634 - L1Md_F3 LINE L1 -14 6570 6235 5 1716 259 269 95 71 chrX 148303150 148303234 -18347062 + B3A SINE B2 27 112 -86 5 1716 426 302 86 13 chrX 148303325 148303476 -18346820 - RSINE1 SINE B4 -1 164 3 5 1716 1122 108 11 33 chrX 148303514 148303696 -18346600 + B2_Mm1t SINE B2 2 179 -14 5 1716 1162 75 0 0 chrX 148304065 148304212 -18346084 + B1_Mus1 SINE Alu 2 148 0 5 1716 550 210 33 65 chrX 148304415 148304568 -18345728 - B1_Mus1 SINE Alu 0 148 1 5 1716 188 349 0 0 chrX 148305731 148305796 -18344500 + MIRc SINE MIR 57 121 -87 5 1716 761 312 79 35 chrX 148306759 148307070 -18343226 - L1M4 LINE L1 -358 5813 5490 5 1716 189 0 0 0 chrX 148307070 148307091 -18343205 + (CGGT)n Simple_repeat Simple_repeat 4 24 0 5 1716 1167 75 0 0 chrX 148307091 148307249 -18343047 + (TTTC)n Simple_repeat Simple_repeat 4 162 0 5 1716 761 288 139 66 chrX 148307249 148308162 -18342134 - L1M4 LINE L1 -694 5489 4554 5 1716 360 385 7 7 chrX 148309784 148309920 -18340376 - RSINE1 SINE B4 -19 146 11 5 1716 796 171 7 28 chrX 148310185 148310329 -18339967 - B1_Mus2 SINE Alu -5 142 2 5 1716 403 298 242 10 chrX 148310330 148310527 -18339769 + B4 SINE B4 50 292 0 5 1716 225 187 169 31 chrX 148310670 148310743 -18339553 - B1F SINE Alu -57 92 11 5 1716 21 57 0 0 chrX 148310763 148310798 -18339498 + AT_rich Low_complexity Low_complexity 1 35 0 5 1716 272 211 187 20 chrX 148311924 148312074 -18338222 + Charlie5 DNA MER1_type 2450 2624 0 5 1716 273 260 53 27 chrX 148312770 148312845 -18337451 + B3A SINE B2 3 79 -119 5 1716 701 65 269 0 chrX 148314032 148314140 -18336156 + B1_Mus1 SINE Alu 1 137 -11 5 1716 254 135 39 0 chrX 148314155 148314207 -18336089 + (CATA)n Simple_repeat Simple_repeat 2 55 0 5 1716 22 35 0 0 chrX 148314577 148314606 -18335690 + AT_rich Low_complexity Low_complexity 1 29 0 6 1716 21 71 0 0 chrX 148314688 148314730 -18335566 + AT_rich Low_complexity Low_complexity 1 42 0 6 1716 315 339 57 78 chrX 148314791 148314932 -18335364 + B4A SINE B4 26 163 -129 6 1716 478 299 82 23 chrX 148315930 148316101 -18334195 + B3 SINE B2 4 184 -32 6 1716 1970 201 183 9 chrX 148316361 148316929 -18333367 + Lx9 LINE L1 6977 7643 -1 6 1716 2309 253 130 11 chrX 148318350 148319483 -18330813 - Lx8 LINE L1 0 7473 6206 6 1716 222 37 0 0 chrX 148320030 148320057 -18330239 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1716 721 211 140 0 chrX 148322129 148322300 -18327996 - RMER15 LTR ERVL -110 465 271 6 1716 732 189 0 16 chrX 148323397 148323526 -18326770 - B1_Mus1 SINE Alu -18 130 4 6 1716 423 131 191 21 chrX 148323876 148323970 -18326326 + B1_Mur4 SINE Alu 41 150 0 6 1716 197 353 48 19 chrX 148324023 148324127 -18326169 - MIRb SINE MIR -76 192 86 6 1716 324 0 0 0 chrX 148324781 148324817 -18325479 + (TTG)n Simple_repeat Simple_repeat 2 37 0 6 1716 310 286 54 11 chrX 148325762 148325854 -18324442 - B1_Mus1 SINE Alu -37 111 16 6 1716 501 228 142 121 chrX 148325883 148326073 -18324223 - B3A SINE B2 -1 194 1 6 1716 24 53 0 0 chrX 148326803 148326841 -18323455 + AT_rich Low_complexity Low_complexity 1 38 0 6 1716 1077 65 0 0 chrX 148327327 148327465 -18322831 + B1_Mm SINE Alu 10 147 0 6 1716 376 347 91 0 chrX 148327598 148327719 -18322577 - B3A SINE B2 -23 175 44 6 1716 1094 71 0 7 chrX 148329128 148329269 -18321027 + B1_Mus1 SINE Alu 3 142 -6 6 1716 721 263 31 26 chrX 148329749 148329940 -18320356 + B3A SINE B2 2 193 -5 6 1716 1351 92 16 0 chrX 148330197 148330382 -18319914 - B2_Mm2 SINE B2 -7 188 1 6 1716 242 291 0 157 chrX 148331338 148331440 -18318856 + MT2B LTR ERVL 155 240 -361 6 1716 489 303 0 35 chrX 148331357 148331470 -18318826 + PB1D9 SINE Alu 7 115 -5 6 1716 209 119 0 23 chrX 148331530 148331573 -18318723 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 6 1716 241 282 25 13 chrX 148332227 148332306 -18317990 + B2_Mm2 SINE B2 43 122 -73 6 1716 301 240 12 85 chrX 148332321 148332403 -18317893 + B3A SINE B2 20 95 -103 6 1716 314 276 208 16 chrX 148333453 148333703 -18316593 - L1M5 LINE L1 -509 5664 5367 6 1716 1041 113 6 23 chrX 148334779 148334951 -18315345 + B2_Mm2 SINE B2 2 170 -25 6 1716 268 250 231 8 chrX 148335104 148335221 -18315075 + B1_Mur2 SINE Alu 6 148 -1 6 1716 818 111 17 0 chrX 148336503 148336620 -18313676 - PB1D9 SINE Alu 0 120 2 6 1716 251 213 0 0 chrX 148337152 148337199 -18313097 - L1MC4 LINE L1 -364 7678 7632 6 1716 349 348 9 9 chrX 148337230 148337346 -18312950 + ID_B1 SINE B4 56 171 -53 6 1716 278 281 48 10 chrX 148337264 148337368 -18312928 + PB1D10 SINE Alu 10 117 0 6 1716 416 214 120 53 chrX 148337887 148338020 -18312276 + ID_B1 SINE B4 79 220 -4 6 1716 1318 62 5 106 chrX 148339386 148339604 -18310692 + L1_Mus2 LINE L1 6368 6563 -3 6 1716 532 232 53 7 chrX 148340507 148340659 -18309637 - MIRc SINE MIR -41 227 69 6 1716 204 135 0 0 chrX 148341583 148341620 -18308676 + (GGA)n Simple_repeat Simple_repeat 3 39 0 6 1716 202 229 0 0 chrX 148341818 148341866 -18308430 + (ATG)n Simple_repeat Simple_repeat 2 49 0 6 1716 259 329 142 21 chrX 148342750 148343046 -18307250 - L2a LINE L2 -1 3425 3028 6 1716 1335 207 283 0 chrX 148345254 148345597 -18304699 - Lx5 LINE L1 -3 7047 6608 6 1716 763 76 190 25 chrX 148345686 148345807 -18304489 + B1_Mus2 SINE Alu 3 143 -4 6 1716 207 0 0 0 chrX 148345845 148345868 -18304428 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 6 1716 263 93 0 23 chrX 148347442 148347486 -18302810 + (CATA)n Simple_repeat Simple_repeat 2 44 0 6 1716 408 351 0 15 chrX 148348140 148348273 -18302023 + ID_B1 SINE B4 81 211 -13 6 1716 214 216 59 0 chrX 148348232 148348283 -18302013 + PB1D10 SINE Alu 61 114 -3 6 1716 816 221 232 10 chrX 148349489 148349799 -18300497 - MTE2b LTR MaLR 0 379 1 6 1716 247 296 23 30 chrX 148353685 148353786 -18296510 - MIRb SINE MIR -109 167 64 6 1716 221 227 127 51 chrX 148353791 148353870 -18296426 - MIRb SINE MIR 0 268 184 6 1716 311 377 0 0 chrX 148354527 148354721 -18295575 + (CTA)n Simple_repeat Simple_repeat 1 194 0 6 1716 249 40 39 39 chrX 148355111 148355163 -18295133 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 6 1716 1232 48 0 0 chrX 148355163 148355309 -18294987 - B1_Mus1 SINE Alu 0 148 3 6 1716 327 312 0 0 chrX 148355389 148355469 -18294827 + ID4_ SINE ID 4 83 0 6 1716 896 102 57 14 chrX 148356455 148356595 -18293701 - B1_Mus2 SINE Alu 0 147 2 6 1716 206 213 0 0 chrX 148357467 148357514 -18292782 + (TGG)n Simple_repeat Simple_repeat 2 48 0 6 1716 636 84 139 9 chrX 148358551 148358659 -18291637 + B1_Mur4 SINE Alu 23 144 -6 6 1716 448 216 50 67 chrX 148359435 148359554 -18290742 + RSINE1 SINE B4 6 122 -43 6 1716 303 49 0 0 chrX 148359730 148359771 -18290525 + (T)n Simple_repeat Simple_repeat 1 41 0 6 1716 1170 61 0 26 chrX 148359775 148359926 -18290370 - B1_Mm SINE Alu 0 147 1 6 1716 335 323 19 39 chrX 148359926 148360029 -18290267 + RSINE1 SINE B4 65 165 0 6 1716 651 229 28 28 chrX 148360086 148360230 -18290066 + B1_Mur2 SINE Alu 1 144 -5 6 1716 512 304 143 73 chrX 148360401 148360598 -18289698 + B4 SINE B4 21 232 -60 6 1716 1304 161 27 5 chrX 148360598 148360817 -18289479 + URR1B DNA MER1_type 2 225 0 6 1716 512 304 143 73 chrX 148360817 148360864 -18289432 + B4 SINE B4 233 281 -11 6 1716 237 270 0 0 chrX 148360903 148360966 -18289330 + MIR SINE MIR 174 236 -26 6 1716 182 291 0 0 chrX 148361131 148361186 -18289110 - MIRc SINE MIR -166 102 48 6 1716 996 93 0 8 chrX 148361484 148361614 -18288682 + B1_Mm SINE Alu 2 130 -17 6 1716 441 0 0 0 chrX 148361615 148361664 -18288632 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1716 258 313 157 50 chrX 148365232 148365474 -18284822 + B4A SINE B4 17 284 -8 6 1716 478 263 104 35 chrX 148365512 148365685 -18284611 - B3A SINE B2 -10 188 4 6 1716 382 233 35 0 chrX 148365740 148365826 -18284470 + RSINE1 SINE B4 44 132 -33 6 1716 573 28 0 0 chrX 148365827 148365898 -18284398 + (TC)n Simple_repeat Simple_repeat 1 71 0 6 1716 3230 39 21 3 chrX 148366621 148367010 -18283286 - MTA_Mm LTR MaLR 0 396 1 6 1716 378 311 40 73 chrX 148367931 148368108 -18282188 + B3A SINE B2 2 172 -26 6 1716 257 182 60 15 chrX 148368252 148368319 -18281977 + PB1D10 SINE Alu 48 117 0 6 1716 756 212 104 16 chrX 148368338 148368530 -18281766 + B3 SINE B2 1 209 -7 6 1716 27 0 0 0 chrX 148369283 148369310 -18280986 + AT_rich Low_complexity Low_complexity 1 27 0 6 1716 21 0 0 0 chrX 148369926 148369947 -18280349 + AT_rich Low_complexity Low_complexity 1 21 0 6 1716 361 297 20 10 chrX 148370466 148370568 -18279728 + PB1D7 SINE Alu 7 109 -11 6 1716 254 284 45 0 chrX 148370925 148370992 -18279304 + PB1 SINE Alu 26 95 -32 6 1716 972 57 7 35 chrX 148371253 148371398 -18278898 - B1_Mm SINE Alu -5 142 2 6 1716 741 230 41 64 chrX 148371661 148371879 -18278417 + B3 SINE B2 4 216 0 6 1716 1296 338 202 44 chrX 148371904 148372317 -18277979 + ERVL-E-int LTR ERVL 3991 4507 -1160 6 1716 4109 83 201 5 chrX 148372317 148372933 -18277363 - RMER19A LTR ERVK 0 737 1 6 1716 1296 313 110 66 chrX 148372933 148373369 -18276927 + ERVL-E-int LTR ERVL 4508 4921 -746 6 214 836 189 7 0 chrX 148373369 148373512 -18276784 + B1_Mur2 SINE Alu 1 144 -5 6 1717 1296 313 110 66 chrX 148373512 148373648 -18276648 + ERVL-E-int LTR ERVL 4922 5067 -600 6 1717 22 35 0 0 chrX 148373734 148373763 -18276533 + AT_rich Low_complexity Low_complexity 1 29 0 6 1717 342 266 38 0 chrX 148374058 148374137 -18276159 + B1F1 SINE Alu 7 88 -61 6 1717 5787 129 39 112 chrX 148374180 148374708 -18275588 - ORR1A2-int LTR MaLR -589 1203 664 6 1717 4014 63 23 6 chrX 148374708 148375222 -18275074 - L1Md_F2 LINE L1 -12 6570 6048 6 1717 5787 129 39 112 chrX 148375222 148375443 -18274853 - ORR1A2-int LTR MaLR -1129 663 445 6 1717 284 0 0 27 chrX 148375443 148375480 -18274816 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 6 1717 5787 129 39 112 chrX 148375480 148376027 -18274269 - ORR1A2-int LTR MaLR -1348 444 1 6 1717 804 54 0 9 chrX 148376031 148376143 -18274153 - ORR1A2 LTR MaLR -8 318 208 6 1717 1118 126 49 45 chrX 148376142 148376366 -18273930 + RMER20A LTR ERVK 273 497 -19 6 1717 1490 90 0 5 chrX 148376375 148376588 -18273708 - ORR1A2 LTR MaLR -115 212 1 6 1717 1187 89 0 0 chrX 148376660 148376828 -18273468 + B2_Mm2 SINE B2 1 168 -27 6 1717 450 53 0 0 chrX 148376837 148376894 -18273402 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 1717 749 215 74 21 chrX 148377074 148377258 -18273038 - ORR1D2 LTR MaLR 0 370 177 6 1717 2591 139 64 30 chrX 148377258 148377755 -18272541 - RMER20A LTR ERVK 0 516 3 6 1717 786 162 27 20 chrX 148377762 148377930 -18272366 - ORR1D2 LTR MaLR -199 179 1 6 1717 1207 62 0 0 chrX 148379107 148379253 -18271043 - B1_Mus2 SINE Alu -1 146 1 6 1717 761 11 21 0 chrX 148379488 148379581 -18270715 + (CATATA)n Simple_repeat Simple_repeat 2 96 0 6 1717 580 190 68 27 chrX 148381634 148381780 -18268516 + LTR41 LTR ERVL 26 177 -591 6 1717 1032 203 39 5 chrX 148381967 148382170 -18268126 + B3 SINE B2 1 210 -6 6 1717 213 305 0 17 chrX 148382271 148382331 -18267965 + GA-rich Low_complexity Low_complexity 3 61 0 6 1717 935 219 0 16 chrX 148382695 148382885 -18267411 + B3 SINE B2 26 212 -4 6 1717 361 242 49 29 chrX 148382914 148383016 -18267280 + B1_Mur1 SINE Alu 46 149 0 6 1717 247 254 0 68 chrX 148383017 148383059 -18267237 + ORR1B1-int LTR MaLR 617 648 -861 6 1717 1092 48 0 20 chrX 148383059 148383208 -18267088 + B1_Mus1 SINE Alu 3 148 0 7 1717 246 70 34 34 chrX 148383208 148383267 -18267029 + (CAAAA)n Simple_repeat Simple_repeat 1 59 0 7 1717 765 265 25 10 chrX 148383489 148383691 -18266605 - B3 SINE B2 -7 209 5 7 1717 345 306 12 0 chrX 148383765 148383850 -18266446 + LTR41 LTR ERVL 382 467 -301 7 1717 485 204 77 10 chrX 148384043 148384147 -18266149 - PB1D9 SINE Alu -9 111 1 7 1717 24 32 0 0 chrX 148384344 148384375 -18265921 + AT_rich Low_complexity Low_complexity 1 31 0 7 1717 467 234 11 0 chrX 148384396 148384490 -18265806 - RSINE1 SINE B4 -59 106 12 7 1717 249 185 18 53 chrX 148384491 148384548 -18265748 - ID4 SINE ID -26 57 3 7 1717 308 186 101 20 chrX 148384550 148384649 -18265647 - L1MEc LINE L1 -5563 837 731 7 1717 227 29 57 0 chrX 148384668 148384703 -18265593 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 7 1717 240 294 78 78 chrX 148385344 148385536 -18264760 - Lx8 LINE L1 -2 7471 7280 7 1717 533 260 15 30 chrX 148385604 148385739 -18264557 - B1_Mur1 SINE Alu -11 138 6 7 1717 411 240 138 13 chrX 148385756 148385908 -18264388 - MLT2B3 LTR ERVL -381 173 3 7 1717 279 0 0 0 chrX 148386032 148386063 -18264233 + (T)n Simple_repeat Simple_repeat 1 31 0 7 1717 346 258 198 12 chrX 148386432 148386580 -18263716 - B3 SINE B2 -38 160 1 7 1717 38204 33 5 2 chrX 148386608 148392762 -18257534 - L1Md_T LINE L1 -2 6583 302 7 1717 346 137 158 27 chrX 148392764 148392874 -18257422 - B2_Mm2 SINE B2 -2 191 47 7 1717 1316 80 28 0 chrX 148392921 148393097 -18257199 - B2_Mm2 SINE B2 -14 181 1 7 1717 1125 114 102 0 chrX 148393104 148393280 -18257016 - B2_Mm2 SINE B2 -1 194 1 7 1717 435 92 0 0 chrX 148393383 148393448 -18256848 + (TG)n Simple_repeat Simple_repeat 2 66 0 7 1717 1464 43 0 0 chrX 148393496 148393684 -18256612 + B2_Mm1t SINE B2 6 193 0 7 1717 1029 239 55 24 chrX 148393687 148393940 -18256356 - B4A SINE B4 -31 261 1 7 1717 220 295 100 7 chrX 148394003 148394143 -18256153 + L2 LINE L2 851 1003 -2416 7 1717 814 253 178 65 chrX 148394147 148394200 -18256096 - MLT2B4 LTR ERVL 0 556 511 7 1717 873 273 246 3 chrX 148394200 148394534 -18255762 - MER47B DNA MER2_type -3 415 1 7 1717 429 20 0 0 chrX 148394536 148394586 -18255710 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 1717 814 253 178 65 chrX 148394586 148395024 -18255272 - MLT2B4 LTR ERVL -46 510 6 7 1717 287 143 0 87 chrX 148395042 148395111 -18255185 - ERVL-int LTR ERVL -14 5700 5638 7 1717 611 195 0 0 chrX 148395131 148395249 -18255047 + B1_Mur3 SINE Alu 32 149 0 7 1717 430 261 22 0 chrX 148395261 148395353 -18254943 + PB1D10 SINE Alu 5 98 -19 7 1717 660 163 208 6 chrX 148395461 148395634 -18254662 + MTD LTR MaLR 104 311 -108 7 1717 479 212 118 18 chrX 148395693 148395749 -18254547 - ERVL-int LTR ERVL -150 5564 5505 7 1717 787 163 202 6 chrX 148395749 148395922 -18254374 - B3 SINE B2 -9 207 1 7 1717 479 212 118 18 chrX 148395922 148396086 -18254210 - ERVL-int LTR ERVL -210 5504 5322 7 1717 1319 222 116 0 chrX 148396149 148396478 -18253818 - ERVL-int LTR ERVL -518 5239 4873 7 1717 572 286 270 52 chrX 148396863 148397174 -18253122 - Lx8 LINE L1 -365 7108 6730 7 1717 27 29 0 0 chrX 148397186 148397220 -18253076 + AT_rich Low_complexity Low_complexity 1 34 0 7 1717 709 212 0 0 chrX 148397235 148397372 -18252924 - B1_Mus1 SINE Alu -11 137 1 7 1717 460 283 52 19 chrX 148397458 148397639 -18252657 - B3A SINE B2 -17 199 14 7 1717 767 235 166 5 chrX 148397639 148397844 -18252452 - Lx8 LINE L1 -789 6684 6447 7 1717 303 239 95 86 chrX 148397967 148398072 -18252224 - PB1D10 SINE Alu -3 114 9 7 1717 1355 225 156 58 chrX 148398090 148398539 -18251757 + Lx8 LINE L1 5274 5731 -116 7 1717 1155 212 4 36 chrX 148398539 148398764 -18251532 - ID_B1 SINE B4 -5 219 2 7 1717 1355 276 149 55 chrX 148398764 148399373 -18250923 + Lx8 LINE L1 5732 6399 -1074 7 1717 1998 282 60 65 chrX 148399379 148399722 -18250574 + Lx8 LINE L1 6661 7001 -472 7 1717 2251 166 42 10 chrX 148399722 148400130 -18250166 + MTC LTR MaLR 1 421 0 7 1717 1998 282 60 65 chrX 148400130 148400549 -18249747 + Lx8 LINE L1 7002 7419 -54 7 1717 622 239 0 151 chrX 148400665 148400857 -18249439 + MTE2b LTR MaLR 1 163 -216 7 1717 560 310 63 75 chrX 148401059 148401377 -18248919 + MLT1A LTR MaLR 42 355 -19 7 1717 600 236 41 0 chrX 148401530 148401653 -18248643 + B3A SINE B2 1 128 -70 7 1717 255 345 8 34 chrX 148401893 148402010 -18248286 + PB1 SINE Alu 12 125 -2 7 1717 373 246 139 0 chrX 148402035 148402069 -18248227 + RSINE1 SINE B4 8 43 -122 7 1717 1615 129 39 72 chrX 148402069 148402402 -18247894 - RLTRETN_Mm LTR ERVK 0 322 1 7 1717 373 246 139 0 chrX 148402402 148402489 -18247807 + RSINE1 SINE B4 44 145 -20 7 1717 1334 245 21 0 chrX 148402691 148402973 -18247323 + ORR1D2 LTR MaLR 1 288 -82 7 1717 213 47 22 44 chrX 148402978 148403023 -18247273 + (CCA)n Simple_repeat Simple_repeat 1 44 0 7 1717 228 35 0 0 chrX 148403025 148403054 -18247242 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 1717 251 172 0 134 chrX 148403054 148403121 -18247175 + ORR1D2 LTR MaLR 286 343 -27 7 1717 1049 210 50 10 chrX 148403134 148403336 -18246960 - B3 SINE B2 -6 210 1 7 1717 754 142 14 7 chrX 148403615 148403757 -18246539 + CT-rich Low_complexity Low_complexity 2 144 0 7 1717 192 163 0 0 chrX 148403899 148403942 -18246354 + T-rich Low_complexity Low_complexity 1 43 0 7 1717 1451 235 140 13 chrX 148404004 148404461 -18245835 + L1_Mur3 LINE L1 5356 5870 -10 7 1717 451 198 73 28 chrX 148404524 148404633 -18245663 - MTD LTR MaLR -190 229 116 7 1717 4069 243 39 37 chrX 148404633 148405727 -18244569 + Lx8 LINE L1 6376 7472 -1 7 1717 422 99 159 36 chrX 148405841 148405959 -18244337 - B2_Mm2 SINE B2 -4 191 46 7 1717 465 19 0 0 chrX 148405989 148406043 -18244253 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 7 1717 1075 114 6 0 chrX 148406043 148406201 -18244095 - B2_Mm2 SINE B2 -35 160 2 7 1717 335 311 115 26 chrX 148406294 148406528 -18243768 + L2c LINE L2 2631 2885 -534 7 1717 1623 230 39 0 chrX 148406735 148407091 -18243205 - ORR1D2 LTR MaLR 0 370 1 7 1717 1432 125 4 63 chrX 148407104 148407253 -18243043 + URR1A DNA MER1_type 1 144 -82 7 1717 1408 61 33 0 chrX 148407253 148407434 -18242862 + B2_Mm1t SINE B2 1 187 -6 7 1717 1432 125 4 63 chrX 148407434 148407523 -18242773 + URR1A DNA MER1_type 145 225 -1 7 1717 461 206 0 29 chrX 148407535 148407640 -18242656 + PB1D9 SINE Alu 18 119 -1 7 1717 775 243 119 23 chrX 148407652 148407871 -18242425 + B4A SINE B4 3 242 -50 7 1717 1129 84 18 0 chrX 148407897 148408064 -18242232 + B2_Mm1t SINE B2 10 179 -14 7 1717 266 108 454 0 chrX 148408115 148408216 -18242080 + B2_Mm2 SINE B2 47 193 -2 7 1717 257 244 47 82 chrX 148408241 148408326 -18241970 + RSINE1 SINE B4 55 136 -29 7 1717 279 0 0 0 chrX 148408461 148408492 -18241804 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 1717 226 176 28 56 chrX 148408957 148409013 -18241283 + T-rich Low_complexity Low_complexity 21 75 0 7 1717 1224 41 0 7 chrX 148409013 148409161 -18241135 - B1_Mm SINE Alu 0 147 1 7 1717 226 176 28 56 chrX 148409161 148409176 -18241120 + T-rich Low_complexity Low_complexity 6 20 0 7 1717 200 324 28 0 chrX 148409302 148409373 -18240923 + L2c LINE L2 3250 3322 -65 7 1717 536 298 24 0 chrX 148410150 148410318 -18239978 + MER5B DNA MER1_type 1 172 -6 7 1717 195 206 130 14 chrX 148410478 148410547 -18239749 + MIR SINE MIR 58 134 -74 7 1717 385 96 40 27 chrX 148410970 148411045 -18239251 + T-rich Low_complexity Low_complexity 5 80 0 7 1717 681 212 54 70 chrX 148411047 148411168 -18239128 + Lx7 LINE L1 7443 7573 -123 7 1717 2066 153 113 11 chrX 148411168 148411550 -18238746 + MTC LTR MaLR 1 421 0 7 1717 681 212 54 70 chrX 148411550 148411670 -18238626 + Lx7 LINE L1 7574 7686 -10 7 1717 1480 70 0 5 chrX 148411670 148411857 -18238439 + B2_Mm2 SINE B2 1 186 -9 7 1717 681 212 54 70 chrX 148411857 148411872 -18238424 + Lx7 LINE L1 7687 7696 0 7 1717 385 192 13 23 chrX 148411884 148412016 -18238280 + L1_Rod LINE L1 450 623 -6549 7 1717 628 157 0 17 chrX 148412019 148412136 -18238160 + Lx9 LINE L1 4737 4851 -996 7 1717 2938 185 50 33 chrX 148412132 148412917 -18237379 + Lx9 LINE L1 5213 6063 -1581 7 1717 2698 77 48 18 chrX 148412917 148413316 -18236980 + RLTR10A LTR ERVK 1 411 0 7 1717 1878 333 54 46 chrX 148413316 148413618 -18236678 + Lx9 LINE L1 6054 6347 -1126 7 1717 3636 216 76 31 chrX 148413623 148414425 -18235871 + Lx9 LINE L1 6719 7550 -94 7 1717 273 29 0 0 chrX 148414425 148414459 -18235837 + (GA)n Simple_repeat Simple_repeat 1 34 0 7 1717 3636 216 76 31 chrX 148414459 148414534 -18235762 + Lx9 LINE L1 7551 7635 -9 7 1717 695 275 35 81 chrX 148414561 148414759 -18235537 + B3A SINE B2 6 194 -4 7 1717 1102 94 88 0 chrX 148414759 148414930 -18235366 - B2_Mm2 SINE B2 -9 186 1 7 1717 25 0 0 0 chrX 148414932 148414957 -18235339 + AT_rich Low_complexity Low_complexity 1 25 0 7 1717 884 140 0 0 chrX 148414966 148415102 -18235194 + B1_Mus2 SINE Alu 2 137 -10 7 1717 423 0 0 0 chrX 148415102 148415149 -18235147 + (CAA)n Simple_repeat Simple_repeat 2 48 0 7 1717 995 60 0 82 chrX 148415162 148415308 -18234988 + B1_Mm SINE Alu 1 134 -13 7 1717 315 0 0 0 chrX 148415308 148415343 -18234953 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 7 1717 453 281 57 14 chrX 148415634 148415775 -18234521 - B1F1 SINE Alu -1 148 2 7 1717 256 298 78 9 chrX 148415824 148415939 -18234357 - B3A SINE B2 -15 183 61 7 1717 291 28 0 0 chrX 148416777 148416813 -18233483 - U2 snRNA snRNA -152 36 1 7 1717 1122 95 0 0 chrX 148417071 148417219 -18233077 + B1_Mus1 SINE Alu 1 148 0 7 1717 24 32 0 0 chrX 148417219 148417250 -18233046 + AT_rich Low_complexity Low_complexity 1 31 0 7 1717 207 250 13 26 chrX 148417863 148417906 -18232390 + (TA)n Simple_repeat Simple_repeat 1 42 0 7 1717 2916 146 8 30 chrX 148417906 148418380 -18231916 + RMER4A LTR ERVK 1 464 -2 7 1717 207 250 13 26 chrX 148418380 148418414 -18231882 + (TA)n Simple_repeat Simple_repeat 1 34 0 7 1717 4353 42 2 0 chrX 148418460 148418962 -18231334 - RLTR1C LTR ERV1 0 503 1 7 1717 961 201 10 30 chrX 148419298 148419498 -18230798 - B3A SINE B2 -1 197 2 7 1717 459 189 0 11 chrX 148419853 148419944 -18230352 + 5S rRNA rRNA 2 91 -30 7 1717 950 231 7 2 chrX 148420210 148420408 -18229888 + B3A SINE B2 6 203 -13 7 1717 678 236 36 0 chrX 148420499 148420639 -18229657 + B1F2 SINE Alu 5 149 0 7 1717 782 196 7 20 chrX 148420641 148420787 -18229509 + B1_Mur1 SINE Alu 1 144 -5 7 1717 703 222 46 41 chrX 148421167 148421364 -18228932 + B3A SINE B2 1 198 0 8 1717 525 32 0 0 chrX 148421865 148421928 -18228368 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 8 1717 654 282 44 13 chrX 148421943 148422101 -18228195 - RSINE1 SINE B4 0 165 3 8 1717 520 162 65 28 chrX 148422143 148422251 -18228045 + B1_Mur4 SINE Alu 1 112 -38 8 1717 945 167 167 0 chrX 148422486 148422678 -18227618 - URR1B DNA MER1_type 0 225 2 8 1717 210 245 0 19 chrX 148422902 148422956 -18227340 + B3A SINE B2 1 53 -145 8 1717 226 219 0 0 chrX 148423007 148423048 -18227248 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 1717 420 20 0 0 chrX 148423967 148424016 -18226280 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1717 360 0 0 0 chrX 148424016 148424055 -18226241 + (GA)n Simple_repeat Simple_repeat 2 41 0 8 1717 1250 197 14 0 chrX 148424733 148424946 -18225350 + B3 SINE B2 1 216 0 8 1717 424 195 12 12 chrX 148425532 148425615 -18224681 + ID4_ SINE ID 1 83 0 8 1717 248 323 173 21 chrX 148425694 148425931 -18224365 - L2 LINE L2 -867 2552 2280 8 1717 221 328 43 8 chrX 148425991 148426108 -18224188 - L2 LINE L2 -1268 2151 2031 8 1717 490 229 96 0 chrX 148426948 148427105 -18223191 + Charlie4a DNA MER1_type 16 187 -321 8 1717 338 250 0 0 chrX 148427111 148427175 -18223121 + B1_Mus2 SINE Alu 1 64 -83 8 1717 212 0 0 35 chrX 148427175 148427204 -18223092 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 8 1717 356 104 5 65 chrX 148427205 148427295 -18223001 - B1_Mm SINE Alu -6 143 65 8 1717 267 188 115 115 chrX 148427250 148427328 -18222968 + B1_Mur2 SINE Alu 52 129 -20 8 1717 369 0 0 0 chrX 148427328 148427369 -18222927 + (TA)n Simple_repeat Simple_repeat 2 42 0 8 1717 297 0 0 0 chrX 148427400 148427433 -18222863 + (ATGTG)n Simple_repeat Simple_repeat 3 35 0 8 1717 1023 229 31 83 chrX 148427458 148427561 -18222735 - B4A SINE B4 -16 276 180 8 1717 299 33 48 32 chrX 148427561 148427623 -18222673 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 8 1717 1023 229 31 83 chrX 148427623 148427809 -18222487 - B4A SINE B4 -113 179 2 8 1717 400 145 66 0 chrX 148427852 148427928 -18222368 - 5S rRNA rRNA -31 90 10 8 1717 350 177 16 0 chrX 148428022 148428084 -18222212 - ID4_ SINE ID -19 64 2 8 1717 526 260 86 5 chrX 148428091 148428115 -18222181 + Charlie4a DNA MER1_type 296 319 -189 8 1717 702 0 0 0 chrX 148428115 148428193 -18222103 + (TA)n Simple_repeat Simple_repeat 1 78 0 8 1717 526 260 86 5 chrX 148428193 148428365 -18221931 + Charlie4a DNA MER1_type 320 507 -1 8 1717 271 250 0 0 chrX 148428473 148428529 -18221767 - ID_B1 SINE B4 -26 198 143 8 1717 1523 33 22 11 chrX 148428549 148428731 -18221565 - B2_Mm1a SINE B2 -8 185 2 8 1717 565 221 60 15 chrX 148429353 148429486 -18220810 + ID_B1 SINE B4 86 224 0 8 1717 679 249 122 0 chrX 148429509 148429690 -18220606 + B3 SINE B2 1 203 -13 8 1717 551 144 215 25 chrX 148429692 148429813 -18220483 - B1_Mur4 SINE Alu -6 144 1 8 1717 628 231 13 58 chrX 148429832 148429988 -18220308 + B1F SINE Alu 1 149 0 8 1717 363 192 0 0 chrX 148430137 148430215 -18220081 + GA-rich Low_complexity Low_complexity 2 79 0 8 1717 3344 146 55 0 chrX 148430250 148430817 -18219479 + Lx2B LINE L1 5161 5758 -119 8 1717 1673 130 372 9 chrX 148430819 148431128 -18219168 - L1_Mur1 LINE L1 -687 5199 4739 8 1717 198 0 0 0 chrX 148431128 148431150 -18219146 + (TTG)n Simple_repeat Simple_repeat 3 24 0 8 1717 1673 130 372 9 chrX 148431150 148431289 -18219007 - L1_Mur1 LINE L1 -1148 4738 4588 8 1717 1014 98 147 0 chrX 148431285 148431448 -18218848 + L1_Mur2 LINE L1 5177 5363 -514 8 1717 3073 139 98 32 chrX 148431465 148432066 -18218230 - RMER19B LTR ERVK -12 890 250 8 1717 5918 168 48 33 chrX 148432066 148433241 -18217055 + Lx2B LINE L1 5796 6988 -12 8 1717 2563 219 79 25 chrX 148433241 148433997 -18216299 + Lx5 LINE L1 5806 6824 -636 8 1717 1427 201 171 97 chrX 148433997 148434471 -18215825 - RMER19C LTR ERVK -102 509 1 8 1717 1140 249 29 51 chrX 148434471 148434784 -18215512 + Lx5 LINE L1 7139 7444 -16 8 1717 408 317 0 48 chrX 148434906 148435032 -18215264 - B1F2 SINE Alu -7 142 23 8 1717 525 258 40 8 chrX 148435071 148435196 -18215100 + RSINE1 SINE B4 2 130 -35 8 1717 363 23 0 0 chrX 148435201 148435245 -18215051 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1717 219 229 180 0 chrX 148435868 148435929 -18214367 + ID2 SINE ID 12 83 0 8 1717 210 307 19 65 chrX 148435952 148436060 -18214236 + L2c LINE L2 3250 3352 -35 8 1717 473 198 127 0 chrX 148437048 148437174 -18213122 + RSINE1 SINE B4 2 143 -22 8 1717 198 0 0 0 chrX 148437186 148437208 -18213088 + (CA)n Simple_repeat Simple_repeat 1 22 0 8 1717 252 143 0 0 chrX 148437220 148437276 -18213020 + (G)n Simple_repeat Simple_repeat 1 56 0 8 1717 311 250 0 26 chrX 148437540 148437618 -18212678 + ID4_ SINE ID 8 83 0 8 1717 537 209 0 0 chrX 148440715 148440806 -18209490 + ID_B1 SINE B4 88 178 -46 8 1717 360 0 0 0 chrX 148440823 148440863 -18209433 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 1717 286 269 25 13 chrX 148440963 148441042 -18209254 + ID4_ SINE ID 1 80 -3 8 1717 339 130 0 0 chrX 148441059 148441113 -18209183 + (GGA)n Simple_repeat Simple_repeat 2 55 0 8 1717 428 228 0 61 chrX 148441414 148441536 -18208760 + PB1D10 SINE Alu 1 111 -6 8 1717 316 300 44 17 chrX 148442777 148442919 -18207377 + L2b LINE L2 3242 3361 -14 8 1717 190 258 179 24 chrX 148443017 148443140 -18207156 - MIR3 SINE MIR -63 145 4 8 1717 368 132 0 38 chrX 148443153 148443171 -18207125 + T-rich Low_complexity Low_complexity 59 76 0 8 1717 1165 62 7 0 chrX 148443171 148443317 -18206979 - B1_Mus1 SINE Alu 0 148 2 8 1717 368 132 0 38 chrX 148443317 148443377 -18206919 + T-rich Low_complexity Low_complexity 1 58 0 8 1717 535 58 0 0 chrX 148443377 148443446 -18206850 + B1_Mus1 SINE Alu 22 90 -58 8 1717 283 127 18 18 chrX 148443397 148443453 -18206843 + 4.5SRNA scRNA scRNA 39 94 0 8 1717 1034 200 214 0 chrX 148443457 148443732 -18206564 + MTEa LTR MaLR 46 379 0 8 1717 1080 278 26 32 chrX 148444482 148444828 -18205468 + Lx8 LINE L1 6894 7237 -236 8 1717 201 74 0 0 chrX 148444829 148444856 -18205440 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 1717 606 149 104 32 chrX 148444857 148444982 -18205314 - B1_Mus2 SINE Alu -1 146 13 8 1717 749 235 7 13 chrX 148445576 148445731 -18204565 + ID_B1 SINE B4 23 176 -48 8 1717 452 248 0 19 chrX 148445645 148445748 -18204548 + PB1D10 SINE Alu 12 112 -5 8 1717 724 194 23 0 chrX 148445757 148445886 -18204410 + RSINE1 SINE B4 3 134 -31 8 1717 355 145 29 14 chrX 148446393 148446463 -18203833 + B4A SINE B4 2 72 -220 8 1717 338 229 101 0 chrX 148446460 148446569 -18203727 + MLT1D LTR MaLR 386 505 0 8 1717 457 176 55 0 chrX 148446694 148446785 -18203511 + RSINE1 SINE B4 2 97 -68 8 1717 217 122 146 0 chrX 148446792 148446833 -18203463 + RSINE1 SINE B4 76 122 -43 8 1717 249 57 0 0 chrX 148446837 148446872 -18203424 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 1717 614 240 18 72 chrX 148446907 148447073 -18203223 - RSINE1 SINE B4 -6 159 3 8 1717 246 257 103 34 chrX 148447213 148447330 -18202966 - L1MA6 LINE L1 -1 6299 6175 8 1717 667 193 82 0 chrX 148447331 148447466 -18202830 - B1_Mus1 SINE Alu 0 148 3 8 1717 373 278 46 11 chrX 148447608 148447722 -18202574 + B1F SINE Alu 6 112 -5 8 1717 4065 211 78 29 chrX 148447729 148448686 -18201610 + Lx8 LINE L1 6234 7237 -236 8 1717 903 109 16 8 chrX 148448849 148448978 -18201318 + B1_Mm SINE Alu 2 131 -16 8 1717 354 308 34 0 chrX 148449041 148449187 -18201109 - L1M5 LINE L1 -1057 5089 4939 8 1717 562 294 69 23 chrX 148449399 148449573 -18200723 + B3A SINE B2 2 183 -15 8 1717 728 114 203 0 chrX 148449573 148449696 -18200600 + B1_Mus1 SINE Alu 1 148 0 8 1717 430 161 45 0 chrX 148449917 148450029 -18200267 + GA-rich Low_complexity Low_complexity 1 117 0 8 1717 499 172 37 0 chrX 148450085 148450219 -18200077 + GA-rich Low_complexity Low_complexity 1 139 0 8 1717 438 256 32 8 chrX 148452303 148452428 -18197868 - MER20 DNA MER1_type -616 167 43 8 1717 907 135 0 0 chrX 148452686 148452819 -18197477 - B1_Mur4 SINE Alu -13 137 5 8 1717 296 246 0 0 chrX 148452859 148452928 -18197368 - B1_Mus1 SINE Alu -70 78 10 8 1717 217 308 15 0 chrX 148452876 148452941 -18197355 - B4A SINE B4 -147 145 80 8 1717 611 286 128 0 chrX 148453367 148453563 -18196733 - ID_B1 SINE B4 -3 221 1 8 1717 1254 237 22 14 chrX 148453902 148454180 -18196116 + B4A SINE B4 3 282 -10 8 1717 186 43 0 0 chrX 148454428 148454451 -18195845 + (T)n Simple_repeat Simple_repeat 1 23 0 8 1717 1108 63 14 0 chrX 148454464 148454606 -18195690 - B1_Mm SINE Alu -1 146 3 8 1717 22 0 0 0 chrX 148454718 148454740 -18195556 + AT_rich Low_complexity Low_complexity 1 22 0 8 1717 808 142 97 0 chrX 148454852 148454986 -18195310 - B1_Mus1 SINE Alu 0 148 2 8 1717 678 247 124 0 chrX 148454988 148455166 -18195130 - B4A SINE B4 -61 231 32 8 1717 688 248 0 8 chrX 148455169 148455303 -18194993 - RSINE1 SINE B4 -29 136 4 8 1717 201 94 0 0 chrX 148455366 148455398 -18194898 + (CAGT)n Simple_repeat Simple_repeat 2 33 0 8 1717 288 0 0 0 chrX 148455934 148455966 -18194330 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 8 1717 988 198 25 5 chrX 148456063 148456266 -18194030 - B3 SINE B2 -9 207 1 8 1717 257 294 11 56 chrX 148456266 148456338 -18193958 - PB1D10 SINE Alu -43 74 7 8 1717 364 230 39 31 chrX 148456424 148456554 -18193742 - L1MC5 LINE L1 -570 7391 7261 8 1717 1633 42 0 0 chrX 148456619 148456812 -18193484 - B2_Mm1a SINE B2 0 193 1 8 1717 387 259 30 22 chrX 148456822 148456956 -18193340 - L1MB2 LINE L1 -53 6118 5984 8 1717 693 229 21 7 chrX 148457708 148457849 -18192447 - B1_Mur2 SINE Alu -5 144 2 8 1717 1150 192 24 19 chrX 148457987 148458199 -18192097 - B3 SINE B2 -3 213 1 9 1717 932 315 25 36 chrX 148458350 148458742 -18191554 - Lx9 LINE L1 -354 7290 6903 9 1717 571 168 119 0 chrX 148458776 148458877 -18191419 - PB1D9 SINE Alu -5 115 3 9 1717 824 196 73 23 chrX 148458900 148459077 -18191219 - B3 SINE B2 -9 207 22 9 1717 2769 44 15 0 chrX 148459102 148459441 -18190855 - L1_Mus1 LINE L1 0 6567 6224 9 1717 582 241 51 29 chrX 148459732 148459907 -18190389 + MER5A DNA MER1_type 6 184 -5 9 1717 236 288 20 25 chrX 148460478 148460582 -18189714 + PB1D10 SINE Alu 46 148 -1 9 1717 269 302 0 25 chrX 148461190 148461309 -18188987 + GA-rich Low_complexity Low_complexity 4 119 0 9 1717 551 282 0 8 chrX 148461500 148461625 -18188671 + RSINE1 SINE B4 11 134 -31 9 1717 243 0 0 0 chrX 148461633 148461660 -18188636 + (TG)n Simple_repeat Simple_repeat 2 28 0 9 1717 285 247 65 52 chrX 148462750 148462827 -18187469 + ID4_ SINE ID 6 83 0 9 1717 386 325 65 68 chrX 148462891 148463139 -18187157 - MIR SINE MIR -13 249 3 9 1717 888 254 52 45 chrX 148464001 148464331 -18185965 - RMER15 LTR ERVL 0 575 244 9 1717 1044 191 54 5 chrX 148464567 148464772 -18185524 + B3 SINE B2 2 216 0 9 1717 497 239 151 42 chrX 148464855 148465021 -18185275 + B3A SINE B2 1 184 -14 9 1717 609 172 201 73 chrX 148465149 148465305 -18184991 - B3 SINE B2 -27 189 1 9 1717 344 311 21 107 chrX 148465324 148465511 -18184785 - B4 SINE B4 -113 179 9 9 1717 666 167 53 53 chrX 148465895 148466028 -18184268 - B1_Mur4 SINE Alu -17 133 1 9 1717 425 269 176 84 chrX 148466379 148466521 -18183775 - RSINE1 SINE B4 0 165 11 9 1717 289 103 0 0 chrX 148466555 148466594 -18183702 + (TTCC)n Simple_repeat Simple_repeat 3 41 0 9 1717 538 158 11 45 chrX 148466600 148466779 -18183517 + CT-rich Low_complexity Low_complexity 5 177 0 9 1717 602 261 0 21 chrX 148466785 148466926 -18183370 - B1_Mur1 SINE Alu -7 142 5 9 1717 288 0 0 0 chrX 148466997 148467029 -18183267 + (TG)n Simple_repeat Simple_repeat 2 33 0 9 1717 605 192 8 16 chrX 148467060 148467182 -18183114 - B3A SINE B2 -76 122 2 9 1717 830 287 22 5 chrX 148467182 148467395 -18182901 - MER21B LTR ERV1 -544 319 103 9 1717 435 315 0 20 chrX 148467576 148467591 -18182705 + ID_B1 SINE B4 79 224 0 9 1717 509 269 22 0 chrX 148467591 148467725 -18182571 + B1_Mur1 SINE Alu 13 149 0 9 1717 604 280 49 6 chrX 148467728 148467911 -18182385 - MER21-int LTR ERV1 -75 4116 3926 9 1717 562 299 6 33 chrX 148467959 148468142 -18182154 - MER21-int LTR ERV1 -350 3841 3664 9 1717 3281 19 45 0 chrX 148468749 148469128 -18181168 - MTA_Mm LTR MaLR 0 396 1 9 1717 9401 21 19 0 chrX 148469128 148470206 -18180090 - MTA_Mm-int LTR MaLR 0 1098 1 9 1717 3383 16 39 0 chrX 148470206 148470587 -18179709 - MTA_Mm LTR MaLR 0 396 1 9 1717 258 350 78 14 chrX 148471187 148471329 -18178967 + MIR SINE MIR 91 241 -21 9 1717 256 297 108 21 chrX 148471405 148471498 -18178798 + PB1D10 SINE Alu 7 107 -10 9 1717 225 0 0 0 chrX 148471504 148471529 -18178767 + (CA)n Simple_repeat Simple_repeat 2 26 0 9 1717 229 243 78 39 chrX 148471611 148471688 -18178608 + MER46C DNA MER2_type 258 337 -1 9 1717 2750 267 72 72 chrX 148472501 148472820 -18177476 - Lx6 LINE L1 -249 6801 6477 9 1717 3321 38 5 2 chrX 148472820 148473215 -18177081 - MTA_Mm LTR MaLR 0 396 1 9 1717 2985 186 74 30 chrX 148473215 148474236 -18176060 - Lx6 LINE L1 -574 6476 5455 9 1717 732 215 51 51 chrX 148474283 148474479 -18175817 - B3A SINE B2 -1 197 2 9 1717 417 319 89 47 chrX 148474643 148474928 -18175368 - L2c LINE L2 -200 3187 2896 9 1717 442 245 36 61 chrX 148474954 148475119 -18175177 - Charlie13b DNA Charlie -255 257 97 9 1717 310 284 77 70 chrX 148475446 148475660 -18174636 + MIRb SINE MIR 1 217 -45 9 1717 634 241 133 0 chrX 148476321 148476479 -18173817 - B3A SINE B2 -18 180 2 9 1717 782 216 26 72 chrX 148476529 148476724 -18173572 - B3A SINE B2 -12 186 1 9 1717 21 57 0 0 chrX 148476726 148476761 -18173535 + AT_rich Low_complexity Low_complexity 1 35 0 9 1717 587 201 97 0 chrX 148477129 148477263 -18173033 + B1_Mur3 SINE Alu 3 149 0 9 1717 456 208 175 0 chrX 148479163 148479317 -18170979 - MER2 DNA MER2_type -72 273 93 9 1717 432 260 9 19 chrX 148479332 148479438 -18170858 - B1_Mur1 SINE Alu -13 136 32 9 1717 219 271 12 12 chrX 148479604 148479690 -18170606 + (TTTA)n Simple_repeat Simple_repeat 1 86 0 9 1717 567 240 233 6 chrX 148479690 148479866 -18170430 - ID_B1 SINE B4 -6 218 3 9 1717 410 226 156 67 chrX 148479955 148480135 -18170161 + B3A SINE B2 2 197 -1 9 1717 752 203 208 0 chrX 148480289 148480480 -18169816 + B4A SINE B4 3 235 -57 9 1717 643 297 59 5 chrX 148480480 148480666 -18169630 + B3A SINE B2 3 198 0 9 1717 394 316 96 14 chrX 148483029 148483238 -18167058 - L1MC5 LINE L1 -32 7929 7704 9 1717 1633 189 101 16 chrX 148483326 148483712 -18166584 - MTD LTR MaLR 0 419 1 9 1717 420 264 113 34 chrX 148483718 148483957 -18166339 - L1MC5 LINE L1 -407 7554 7297 9 1717 479 228 45 85 chrX 148484090 148484170 -18166126 - MER2 DNA MER2_type -68 277 203 9 1717 895 174 0 13 chrX 148484170 148484321 -18165975 - B1_Mur2 SINE Alu 0 149 1 9 1717 479 228 45 85 chrX 148484321 148484441 -18165855 - MER2 DNA MER2_type -143 202 85 9 1717 855 228 88 5 chrX 148484455 148484649 -18165647 - B3 SINE B2 -6 210 1 9 1717 431 226 21 0 chrX 148484810 148484903 -18165393 - PB1 SINE Alu -2 125 31 9 1717 246 293 93 0 chrX 148484948 148485023 -18165273 + ID4_ SINE ID 2 83 0 9 1717 351 251 164 50 chrX 148485367 148485568 -18164728 - L1MC5 LINE L1 -748 7213 6990 9 1717 30 0 0 0 chrX 148485901 148485931 -18164365 + AT_rich Low_complexity Low_complexity 1 30 0 9 1717 187 103 25 25 chrX 148486226 148486266 -18164030 + CT-rich Low_complexity Low_complexity 2 41 0 9 1717 227 268 0 0 chrX 148486347 148486403 -18163893 + B4A SINE B4 84 139 -153 9 1717 971 123 0 12 chrX 148486912 148487076 -18163220 + (TTCC)n Simple_repeat Simple_repeat 4 165 0 9 1717 776 241 151 27 chrX 148487359 148487666 -18162630 - Lx8 LINE L1 -1582 5891 5572 9 1717 630 233 30 0 chrX 148487666 148487799 -18162497 - B1_Mur2 SINE Alu -10 139 3 9 1717 776 256 149 164 chrX 148487799 148487971 -18162325 - Lx8 LINE L1 -309 5571 5366 9 1717 418 239 94 0 chrX 148487971 148488088 -18162208 - RSINE1 SINE B4 -35 130 3 9 1717 776 256 149 164 chrX 148488088 148488642 -18161654 - Lx8 LINE L1 -309 5365 4698 9 1717 879 245 75 29 chrX 148488660 148488941 -18161355 - Lx8 LINE L1 0 7473 7180 9 1717 1860 288 45 31 chrX 148488955 148489773 -18160523 - Lx8 LINE L1 -1413 4730 3901 9 1717 483 316 78 13 chrX 148489826 148490009 -18160287 + B3A SINE B2 3 202 -14 9 1717 532 284 25 13 chrX 148490063 148490220 -18160076 + B3A SINE B2 22 180 -18 9 1717 264 274 124 21 chrX 148490252 148490349 -18159947 + Lx8 LINE L1 7135 7241 -232 9 1717 1199 156 63 0 chrX 148490527 148490732 -18159564 - URR1B DNA MER1_type 0 225 8 9 1717 348 195 65 0 chrX 148490732 148490809 -18159487 + Lx8 LINE L1 7390 7471 -2 9 1717 766 289 50 8 chrX 148491236 148491494 -18158802 - Lx8 LINE L1 -2324 3819 3551 9 1717 479 150 60 9 chrX 148491494 148491587 -18158709 + PB1D9 SINE Alu 2 92 -55 9 1717 357 82 0 0 chrX 148491600 148491649 -18158647 + (TGGA)n Simple_repeat Simple_repeat 2 50 0 9 1717 292 276 42 1 chrX 148491768 148491876 -18158420 - Lx8 LINE L1 -2584 3559 3446 9 1717 801 0 0 0 chrX 148491913 148492002 -18158294 + (GGAAA)n Simple_repeat Simple_repeat 4 92 0 9 1717 267 250 30 10 chrX 148492012 148492113 -18158183 - Lx8 LINE L1 -2589 3554 3452 9 1717 392 336 9 0 chrX 148492159 148492269 -18158027 + B3 SINE B2 43 153 -63 9 1717 303 279 117 7 chrX 148494744 148494881 -18155415 - L2b LINE L2 -3 3372 3221 9 1717 1078 236 0 14 chrX 148494959 148495170 -18155126 + B3 SINE B2 1 208 -8 9 1717 185 287 67 33 chrX 148496808 148496898 -18153398 - L2b LINE L2 -228 3147 3055 9 1717 318 278 48 6 chrX 148496909 148497021 -18153275 + MIR SINE MIR 68 177 -91 9 1717 624 222 47 31 chrX 148497455 148497644 -18152652 - B3A SINE B2 -7 186 1 9 1717 233 255 0 0 chrX 148497647 148497694 -18152602 + B1F1 SINE Alu 14 60 -89 9 1717 393 260 102 0 chrX 148498064 148498191 -18152105 - MER113A DNA MER1_type -73 241 102 9 1717 264 240 111 8 chrX 148498264 148498380 -18151916 + MIRb SINE MIR 44 173 -95 9 1717 653 219 126 37 chrX 148498457 148498647 -18151649 - B3 SINE B2 -4 212 6 9 1717 698 146 108 0 chrX 148498662 148498792 -18151504 - B1_Mur4 SINE Alu 0 150 7 9 1717 214 233 33 16 chrX 148499084 148499145 -18151151 - MER5A DNA MER1_type -41 148 87 9 1717 565 196 84 0 chrX 148499876 148499983 -18150313 - B3 SINE B2 0 216 101 9 1717 460 167 0 0 chrX 148500000 148500072 -18150224 - B3 SINE B2 -143 73 2 1 1717 192 289 0 0 chrX 148500466 148500511 -18149785 + L2a LINE L2 3344 3388 -38 2 1717 986 223 15 10 chrX 148500678 148500873 -18149423 + B3 SINE B2 15 210 -6 3 1717 1005 206 80 25 chrX 148501809 148502008 -18148288 + B3 SINE B2 2 211 -5 4 1717 203 258 16 0 chrX 148502774 148502836 -18147460 + (TTCA)n Simple_repeat Simple_repeat 3 65 0 5 1717 2542 169 23 50 chrX 148503787 148504215 -18146081 - RMER4A LTR ERVK 0 466 48 6 1717 1154 76 7 7 chrX 148504215 148504360 -18145936 - B1_Mus2 SINE Alu -1 146 2 7 1717 2542 169 23 50 chrX 148504360 148504410 -18145886 - RMER4A LTR ERVK -419 47 1 6 214 916 107 67 22 chrX 148504503 148504637 -18145659 + B1_Mur4 SINE Alu 3 142 -8 8 1718 228 64 64 0 chrX 148504637 148504684 -18145612 + (CAA)n Simple_repeat Simple_repeat 2 51 0 9 1718 321 47 0 0 chrX 148504813 148504856 -18145440 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 1 1718 1014 199 11 43 chrX 148504938 148505122 -18145174 - B3A SINE B2 -16 182 5 1 1718 237 232 150 132 chrX 148505228 148505462 -18144834 + YREP_Mm Unknown Unknown 58 295 -1517 1 1718 713 258 0 0 chrX 148505348 148505480 -18144816 - ID_B1 SINE B4 -8 216 85 1 1718 555 293 8 0 chrX 148505624 148505757 -18144539 - RSINE1 SINE B4 -20 145 12 1 1718 378 0 0 0 chrX 148505805 148505847 -18144449 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1718 315 0 0 0 chrX 148505847 148505881 -18144415 + (GA)n Simple_repeat Simple_repeat 1 35 0 1 1718 257 263 129 20 chrX 148505895 148505996 -18144300 - ID_B1 SINE B4 0 224 113 1 1718 1231 69 0 0 chrX 148506191 148506336 -18143960 + B1_Mm SINE Alu 1 145 -2 1 1718 396 0 0 0 chrX 148506336 148506380 -18143916 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1 1718 420 112 12 0 chrX 148506512 148506592 -18143704 + Lx4A LINE L1 6978 7058 0 2 1718 345 312 13 31 chrX 148506693 148506852 -18143444 - HAL1 LINE L1 -694 1813 1658 2 1718 534 299 132 36 chrX 148506895 148507005 -18143291 - Lx9 LINE L1 -29 7615 7503 2 1718 300 53 0 0 chrX 148507005 148507043 -18143253 + (TATG)n Simple_repeat Simple_repeat 2 39 0 2 1718 1206 289 121 21 chrX 148507043 148507606 -18142690 - Lx9 LINE L1 -142 7502 6875 2 1718 1027 96 63 19 chrX 148507613 148507772 -18142524 - B2_Mm2 SINE B2 -28 167 2 2 1718 377 306 0 0 chrX 148507775 148507873 -18142423 - Lx9 LINE L1 -754 6890 6793 2 1718 2758 68 6 0 chrX 148507932 148508257 -18142039 + ORR1A2 LTR MaLR 1 327 0 2 1718 455 244 12 0 chrX 148508351 148508433 -18141863 - PB1 SINE Alu -20 107 25 2 1718 479 299 65 16 chrX 148508527 148508775 -18141521 - L1MDa LINE L1 -5071 1562 1303 2 1718 863 205 7 7 chrX 148508796 148508948 -18141348 - RSINE1 SINE B4 -5 160 9 2 1718 1231 269 38 38 chrX 148508954 148509376 -18140920 - L1MDa LINE L1 -5375 1258 837 2 1718 457 329 34 14 chrX 148509369 148509517 -18140779 - L1MDa LINE L1 -6132 501 351 2 1718 192 40 0 0 chrX 148509554 148509579 -18140717 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 2 1718 337 240 93 0 chrX 148509795 148509870 -18140426 + Lx8 LINE L1 6933 7014 -459 3 1718 332 334 115 87 chrX 148509892 148510336 -18139960 + Lx8 LINE L1 7017 7472 -1 3 1718 234 333 83 0 chrX 148510869 148510965 -18139331 - HAL1 LINE L1 -2403 104 1 3 1718 2164 136 80 15 chrX 148511077 148511442 -18138854 - ORR1B1 LTR MaLR -4 390 14 3 1718 548 209 96 0 chrX 148511544 148511659 -18138637 - B1_Mur4 SINE Alu 0 149 24 3 1718 910 248 103 49 chrX 148511802 148512065 -18138231 - B4 SINE B4 -14 278 2 3 1718 332 301 158 6 chrX 148512197 148512374 -18137922 - HAL1 LINE L1 -585 1922 1719 3 1718 340 345 110 40 chrX 148512441 148512740 -18137556 + MLT1K LTR MaLR 123 442 -153 3 1718 494 227 90 9 chrX 148513207 148513318 -18136978 + PB1D7 SINE Alu 1 120 0 3 1718 2361 120 14 9 chrX 148513454 148513798 -18136498 - Lx3B LINE L1 -1 6972 6627 3 1718 673 331 27 39 chrX 148513987 148514323 -18135973 + L1ME5 LINE L1 5613 5944 -250 3 1718 348 291 124 71 chrX 148514806 148515243 -18135053 - HAL1 LINE L1 -794 1713 1254 3 1718 354 259 92 31 chrX 148515392 148515587 -18134709 - L1MA4 LINE L1 -119 6181 5975 4 1718 844 209 0 14 chrX 148515721 148515862 -18134434 - B1_Mur3 SINE Alu -7 142 4 4 1718 1409 262 122 22 chrX 148516388 148516775 -18133521 + Lx8 LINE L1 6905 7307 -166 4 1718 3401 63 2 0 chrX 148516775 148517170 -18133126 - MTA_Mm LTR MaLR 0 396 1 4 1718 8772 67 16 4 chrX 148517170 148518255 -18132041 - MTA_Mm-int LTR MaLR 0 1098 1 4 1718 3208 55 28 5 chrX 148518255 148518642 -18131654 - MTA_Mm LTR MaLR 0 396 1 4 1718 1409 262 122 22 chrX 148518642 148518743 -18131553 + Lx8 LINE L1 7308 7442 -31 4 1718 1540 163 15 144 chrX 148518826 148519221 -18131075 - ORR1C1 LTR MaLR 0 378 35 4 1718 511 155 0 35 chrX 148519459 148519546 -18130750 - ID_B1 SINE B4 -7 217 134 4 1718 439 193 0 0 chrX 148519553 148519636 -18130660 + B3 SINE B2 131 213 -3 4 1718 349 263 26 13 chrX 148519638 148519715 -18130581 + B3 SINE B2 109 186 -30 4 1718 335 305 47 9 chrX 148519707 148519813 -18130483 - ID_B1 SINE B4 -107 117 8 4 1718 6544 84 20 1 chrX 148519987 148520828 -18129468 - L1_Mus3 LINE L1 -11 6627 5771 4 1718 479 226 29 0 chrX 148521117 148521219 -18129077 - B3 SINE B2 -2 214 110 5 1718 738 165 68 48 chrX 148521228 148521374 -18128922 - B1_Mur3 SINE Alu 0 149 1 5 1718 293 226 0 203 chrX 148521263 148521396 -18128900 - MT2B LTR ERVL -344 257 152 5 1718 318 50 0 0 chrX 148521433 148521473 -18128823 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1718 497 198 211 16 chrX 148521473 148521596 -18128700 - B3A SINE B2 -47 151 5 5 1718 1602 58 16 10 chrX 148521691 148521884 -18128412 - B2_Mm2 SINE B2 0 195 2 5 1718 309 352 133 78 chrX 148521971 148522384 -18127912 + MLT1J LTR MaLR 58 493 -19 5 1718 694 204 56 61 chrX 148522397 148522595 -18127701 - B3A SINE B2 0 198 2 5 1718 974 243 29 5 chrX 148523388 148523595 -18126701 - B3 SINE B2 0 216 5 5 1718 335 194 37 52 chrX 148523615 148523634 -18126662 - ID_B1 SINE B4 -63 161 113 4 1718 390 148 33 0 chrX 148523634 148523695 -18126601 - B1_Mur3 SINE Alu -85 64 2 5 1718 587 246 91 0 chrX 148523712 148523822 -18126474 - PB1 SINE Alu -7 120 1 6 1718 615 90 117 29 chrX 148523872 148523975 -18126321 - B1_Mus2 SINE Alu 0 147 36 6 1718 189 346 28 9 chrX 148524174 148524282 -18126014 + MIRb SINE MIR 150 259 -9 6 1718 262 299 65 0 chrX 148524745 148524852 -18125444 - MIR SINE MIR -55 153 40 6 1718 209 244 211 44 chrX 148524960 148525050 -18125246 - MIR SINE MIR -79 129 25 6 1718 1532 214 58 56 chrX 148525181 148525557 -18124739 - MTEa LTR MaLR 0 379 3 6 1718 450 0 0 0 chrX 148525665 148525715 -18124581 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1718 459 262 117 16 chrX 148525722 148525850 -18124446 - RSINE1 SINE B4 -22 143 3 6 1718 187 253 91 57 chrX 148525873 148525961 -18124335 - MIRm SINE MIR -98 178 88 6 1718 189 0 0 0 chrX 148526511 148526532 -18123764 + (TTA)n Simple_repeat Simple_repeat 1 21 0 6 1718 199 312 181 23 chrX 148526536 148526795 -18123501 + L2c LINE L2 3084 3383 -4 7 1718 1570 226 94 18 chrX 148527082 148527424 -18122872 - ORR1D2 LTR MaLR -2 368 1 7 1718 5399 210 78 71 chrX 148527424 148527846 -18122450 - ORR1D2-int LTR MaLR 0 1370 943 7 1718 2703 62 30 0 chrX 148527846 148528184 -18122112 - L1_Mus1 LINE L1 0 6567 6220 7 1718 5399 210 78 71 chrX 148528184 148529062 -18121234 - ORR1D2-int LTR MaLR -428 942 58 7 1718 354 23 0 0 chrX 148529062 148529105 -18121191 + (CCAA)n Simple_repeat Simple_repeat 2 44 0 7 1718 5399 210 78 71 chrX 148529105 148529163 -18121133 - ORR1D2-int LTR MaLR -1313 57 1 7 1718 1611 224 50 14 chrX 148529163 148529520 -18120776 - ORR1D2 LTR MaLR 0 370 1 7 1718 243 295 16 0 chrX 148529618 148529679 -18120617 + ID4 SINE ID 15 76 -7 7 1718 5401 214 46 26 chrX 148529911 148531059 -18119237 - Lx5 LINE L1 0 7050 5878 7 1718 2200 113 36 59 chrX 148531059 148531396 -18118900 - ORR1A4 LTR MaLR 0 329 1 7 1718 5401 214 46 26 chrX 148531396 148531444 -18118852 - Lx5 LINE L1 -1173 5877 5830 7 1718 690 245 77 0 chrX 148531550 148531693 -18118603 - RSINE1 SINE B4 -6 159 6 7 1718 549 290 30 0 chrX 148531830 148531961 -18118335 - ID_B1 SINE B4 -10 214 80 7 1718 1642 179 83 21 chrX 148532287 148532612 -18117684 - MER2 DNA MER2_type 0 345 1 7 1718 637 234 145 0 chrX 148532679 148532803 -18117493 - B1F1 SINE Alu -7 142 1 8 1718 2782 218 83 38 chrX 148532818 148533587 -18116709 - Lx9 LINE L1 -5 7639 6836 8 1718 431 252 0 45 chrX 148533587 148533698 -18116598 + RMER15 LTR ERVL 1 106 -469 8 1718 1092 57 0 7 chrX 148533698 148533840 -18116456 + B2_Mm2 SINE B2 2 142 -53 8 1718 1549 182 43 97 chrX 148533831 148533847 -18116449 + RMER15 LTR ERVL 79 94 -481 8 1718 549 0 0 0 chrX 148533847 148533908 -18116388 + (GGA)n Simple_repeat Simple_repeat 3 63 0 8 1718 1549 182 43 97 chrX 148533908 148534262 -18116034 + RMER15 LTR ERVL 95 429 -146 8 1718 2312 145 72 8 chrX 148534262 148534650 -18115646 + MTC LTR MaLR 1 413 -8 8 1718 797 117 0 0 chrX 148534652 148534763 -18115533 + RMER15 LTR ERVL 423 533 -42 8 1718 2099 251 28 11 chrX 148534784 148535248 -18115048 - Lx9 LINE L1 -804 6840 6369 8 1718 1129 259 28 28 chrX 148535232 148535586 -18114710 - L1MB8 LINE L1 -2 6176 5823 8 1718 801 262 35 30 chrX 148535586 148535783 -18114513 - B3A SINE B2 0 198 1 8 1718 253 316 0 73 chrX 148535816 148535898 -18114398 + ID SINE ID 4 79 -145 8 1718 249 309 0 67 chrX 148535859 148535949 -18114347 + RMER12 LTR ERVK 738 821 -501 8 1718 857 201 51 181 chrX 148535952 148535996 -18114300 - L1MC2 LINE L1 -20 6324 6283 9 1718 7314 78 49 6 chrX 148535996 148536970 -18113326 + Lx3_Mus LINE L1 5994 7009 0 9 1718 857 201 51 181 chrX 148536970 148537191 -18113105 - L1MC2 LINE L1 -62 6282 6111 9 1718 304 314 114 0 chrX 148537191 148537296 -18113000 - PB1D10 SINE Alu 0 117 1 9 1718 857 201 51 181 chrX 148537296 148537382 -18112914 - L1MC2 LINE L1 -234 6110 6018 9 1718 1090 210 40 80 chrX 148537383 148537551 -18112745 + Lx6 LINE L1 6824 6980 -480 9 1718 2974 50 28 0 chrX 148537551 148537908 -18112388 + L1_Mus1 LINE L1 6201 6567 0 9 1718 1090 210 40 80 chrX 148537908 148538039 -18112257 + Lx6 LINE L1 6981 7111 -349 9 1718 501 17 0 0 chrX 148538050 148538108 -18112188 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 9 1718 1265 71 0 17 chrX 148538109 148538281 -18112015 - B2_Mm2 SINE B2 -25 170 2 9 1718 662 172 44 19 chrX 148538292 148538452 -18111844 + Lx7 LINE L1 7384 7547 -149 9 1718 392 291 18 0 chrX 148538515 148538625 -18111671 + Lx7 LINE L1 7200 7311 -385 9 1718 218 144 7 80 chrX 148538641 148538728 -18111568 + T-rich Low_complexity Low_complexity 1 80 0 9 1718 281 26 26 0 chrX 148538853 148538891 -18111405 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1718 494 263 8 41 chrX 148539332 148539455 -18110841 - RSINE1 SINE B4 -44 121 3 1 1718 459 215 8 130 chrX 148539465 148539588 -18110708 - PB1D10 SINE Alu -5 112 5 1 1718 500 190 103 8 chrX 148539602 148539719 -18110577 - L1MC2 LINE L1 -367 5966 5839 9 1718 270 195 24 12 chrX 148539720 148539803 -18110493 + T-rich Low_complexity Low_complexity 2 85 0 1 1718 872 70 0 0 chrX 148539808 148539923 -18110373 - B1_Mus1 SINE Alu -5 143 29 1 1718 2052 223 71 9 chrX 148539924 148540472 -18109824 - L1MC2 LINE L1 -493 5851 5270 9 1718 273 268 42 0 chrX 148540479 148540550 -18109746 + ID4_ SINE ID 9 82 -1 1 1718 907 160 14 0 chrX 148540604 148540748 -18109548 - B1_Mus1 SINE Alu 0 148 3 1 1718 353 287 40 34 chrX 148540750 148540898 -18109398 - L1MC2 LINE L1 -981 5165 5017 9 1718 6404 185 60 10 chrX 148540943 148542321 -18107975 - Lx5 LINE L1 -49 7001 5524 1 1718 390 0 0 0 chrX 148542322 148542366 -18107930 - ORR1A3 LTR MaLR -8 318 275 1 1718 922 43 0 8 chrX 148542365 148542483 -18107813 - B1_Mm SINE Alu -29 118 2 1 1718 1735 124 44 0 chrX 148542483 148542755 -18107541 - ORR1A3 LTR MaLR -42 284 1 1 1718 2921 154 73 12 chrX 148542755 148543336 -18106960 - Lx5 LINE L1 -346 5531 4906 1 1718 9642 70 53 10 chrX 148543335 148544260 -18106036 - Lx3_Mus LINE L1 0 7009 6051 1 1718 180 0 0 0 chrX 148544260 148544280 -18106016 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 1 1718 9642 70 53 10 chrX 148544280 148544686 -18105610 - Lx3_Mus LINE L1 -959 6050 5622 1 1718 369 0 0 0 chrX 148544686 148544727 -18105569 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 1718 285 186 17 0 chrX 148544727 148544786 -18105510 - Lx5 LINE L1 -1250 4896 4837 1 1718 378 0 0 0 chrX 148545108 148545150 -18105146 + (T)n Simple_repeat Simple_repeat 1 42 0 1 1718 1265 54 0 0 chrX 148545150 148545298 -18104998 - B1_Mus1 SINE Alu 0 148 1 1 1718 4910 53 0 0 chrX 148545318 148545881 -18104415 - L1_Mus1 LINE L1 -4 6563 6001 1 1718 613 255 79 5 chrX 148546009 148546198 -18104098 - Lx5 LINE L1 -1326 4820 4618 1 1718 554 200 34 75 chrX 148546205 148546351 -18103945 - URR1A DNA MER1_type -78 148 9 1 1718 1563 204 68 72 chrX 148546354 148546841 -18103455 - Lx5 LINE L1 -1581 4565 4081 1 1718 197 59 0 56 chrX 148546841 148546877 -18103419 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1 1718 881 297 72 11 chrX 148546887 148547149 -18103147 - B4 SINE B4 -14 278 1 1 1718 1727 268 98 76 chrX 148547149 148547707 -18102589 - L1MC4 LINE L1 -335 7707 7110 1 1718 333 0 0 0 chrX 148547707 148547744 -18102552 + (TATG)n Simple_repeat Simple_repeat 4 40 0 1 1718 1727 268 98 76 chrX 148547744 148547907 -18102389 - L1MC4 LINE L1 -933 7109 6965 1 1718 732 303 172 43 chrX 148547907 148548396 -18101900 - MLT2B3 LTR ERVL -1 553 2 1 1718 1727 268 98 76 chrX 148548396 148548598 -18101698 - L1MC4 LINE L1 -1078 6964 6763 1 1718 213 259 0 0 chrX 148548818 148548872 -18101424 - MIRb SINE MIR -10 258 205 1 1718 277 252 19 48 chrX 148549139 148549243 -18101053 + MIRc SINE MIR 165 265 -3 1 1718 248 271 186 0 chrX 148550100 148550170 -18100126 + B1F SINE Alu 67 149 0 1 1718 456 227 91 0 chrX 148550189 148550299 -18099997 + ID_B1 SINE B4 104 223 -1 1 1718 295 197 0 116 chrX 148550327 148550413 -18099883 + MT2B LTR ERVL 189 264 -337 1 1718 761 109 0 0 chrX 148550338 148550448 -18099848 + B1_Mur3 SINE Alu 40 149 0 1 1718 953 116 7 0 chrX 148550465 148550620 -18099676 + (GGAA)n Simple_repeat Simple_repeat 2 157 0 1 1718 2906 127 4 45 chrX 148550785 148551256 -18099040 - Lx3B LINE L1 -4 6969 6518 1 1718 490 173 229 60 chrX 148551257 148551423 -18098873 - B2_Mm2 SINE B2 -1 194 1 1 1718 1258 121 35 0 chrX 148551438 148551611 -18098685 - B2_Mm1t SINE B2 -14 179 1 1 1718 436 320 26 0 chrX 148551611 148551764 -18098532 + MLT1E1 LTR MaLR 32 188 -372 1 1718 306 0 0 0 chrX 148551789 148551823 -18098473 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1718 897 307 40 51 chrX 148551855 148552230 -18098066 + MLT1E1 LTR MaLR 178 643 -11 1 1718 300 366 72 88 chrX 148552558 148552935 -18097361 + L1MB5 LINE L1 4530 4900 -1246 1 1718 811 221 0 0 chrX 148552998 148553147 -18097149 + B3 SINE B2 2 150 -66 1 1718 423 277 8 8 chrX 148553214 148553345 -18096951 - L1ME2 LINE L1 -2 6162 6032 1 1718 3564 167 66 8 chrX 148553389 148554022 -18096274 - Lx9 LINE L1 -208 7436 6767 1 1718 650 270 122 61 chrX 148554029 148554274 -18096022 - MLT1A0 LTR MaLR -87 278 19 1 1718 570 300 87 76 chrX 148554271 148554668 -18095628 + MLT1D LTR MaLR 66 434 -71 1 1718 265 222 0 0 chrX 148554660 148554705 -18095591 - tRNA-Ala-GCY_ tRNA tRNA -11 64 20 1 1718 930 268 0 0 chrX 148554725 148554889 -18095407 - RSINE1 SINE B4 -1 164 1 1 1718 226 203 68 0 chrX 148554891 148554950 -18095346 + MLT1D LTR MaLR 443 505 0 1 1718 970 288 60 28 chrX 148555111 148555393 -18094903 - B4 SINE B4 0 292 2 1 1718 225 193 86 54 chrX 148555393 148555486 -18094810 - L1MC4a LINE L1 -1924 5958 5863 1 1718 341 253 124 41 chrX 148555704 148555873 -18094423 + L1ME4a LINE L1 5937 6119 -5 1 1718 1154 95 0 35 chrX 148556040 148556214 -18094082 + B2_Mm2 SINE B2 28 195 0 1 1718 257 203 51 0 chrX 148556261 148556320 -18093976 + MLT1J2 LTR MaLR 72 133 -315 1 1718 500 260 10 0 chrX 148556513 148556613 -18093683 - PB1D10 SINE Alu -15 102 2 1 1718 270 228 152 0 chrX 148556880 148556959 -18093337 - PB1D10 SINE Alu 0 117 27 1 1718 334 253 0 0 chrX 148557158 148557233 -18093063 + ID4 SINE ID 2 76 -7 1 1718 271 257 0 54 chrX 148557168 148557242 -18093054 + tRNA-Ala-GCY_ tRNA tRNA 6 75 0 1 1718 2429 254 48 1 chrX 148557242 148557443 -18092853 + L1MB5 LINE L1 5191 5393 -781 1 1718 847 184 7 0 chrX 148557443 148557590 -18092706 + B1_Mur1 SINE Alu 1 148 -1 1 1718 2429 261 86 23 chrX 148557590 148558272 -18092024 + L1MB5 LINE L1 5394 6126 -48 1 1718 703 189 16 0 chrX 148558308 148558435 -18091861 + RSINE1 SINE B4 4 132 -33 1 1718 607 258 111 59 chrX 148558435 148558806 -18091490 + L1MB5 LINE L1 5622 6011 -163 1 1718 360 234 97 0 chrX 148558858 148558962 -18091334 + PB1 SINE Alu 21 220 -91 1 1718 363 309 163 19 chrX 148559231 148559488 -18090808 + L2 LINE L2 1910 2203 -1216 1 1718 1634 256 58 19 chrX 148559576 148560094 -18090202 - MER89 LTR ERV1 -15 544 7 1 1718 222 355 109 0 chrX 148560159 148560379 -18089917 + L2 LINE L2 2331 2574 -845 1 1718 525 267 8 8 chrX 148560437 148560554 -18089742 - PB1 SINE Alu -8 119 3 1 1718 976 230 24 19 chrX 148561166 148561374 -18088922 - B3 SINE B2 -7 209 1 1 1718 945 136 0 0 chrX 148561379 148561533 -18088763 + (TTC)n Simple_repeat Simple_repeat 3 156 0 1 1718 531 281 7 20 chrX 148561536 148561685 -18088611 - B1F SINE Alu -1 148 2 1 1718 332 320 0 0 chrX 148561971 148562049 -18088247 - ID4 SINE ID -3 80 3 1 1718 501 158 44 12 chrX 148562100 148562260 -18088036 + CT-rich Low_complexity Low_complexity 2 166 0 1 1718 314 266 0 0 chrX 148562260 148562324 -18087972 - ID4_ SINE ID -18 65 2 1 1718 323 297 93 8 chrX 148562335 148562464 -18087832 - B1F1 SINE Alu -5 144 5 1 1718 1023 247 110 35 chrX 148562786 148563240 -18087056 - L1MC LINE L1 -1329 4817 4330 1 1718 940 84 0 40 chrX 148563240 148563255 -18087041 + B1_Mus1 SINE Alu 7 16 -132 1 1718 369 0 0 0 chrX 148563255 148563296 -18087000 + (TGG)n Simple_repeat Simple_repeat 2 42 0 1 1718 949 76 0 0 chrX 148563296 148563428 -18086868 + B1_Mm SINE Alu 16 147 0 1 1718 265 240 17 103 chrX 148563444 148563560 -18086736 - L1MD LINE L1 -1810 4336 4231 1 1718 417 219 168 16 chrX 148563597 148563722 -18086574 - B1F SINE Alu -2 147 4 1 1718 748 225 22 0 chrX 148563895 148564033 -18086263 - RSINE1 SINE B4 -22 143 3 1 1718 1305 96 23 0 chrX 148564057 148564234 -18086062 + B2_Mm2 SINE B2 2 182 -13 1 1718 386 74 14 18 chrX 148564298 148564364 -18085932 + B2_Mm2 SINE B2 46 116 -82 1 1718 216 0 0 0 chrX 148564373 148564397 -18085899 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1 1718 509 304 40 87 chrX 148564429 148564775 -18085521 + L1M5 LINE L1 3876 4205 -1941 1 1718 186 258 97 0 chrX 148564776 148564838 -18085458 - L3 LINE CR1 -219 4270 4203 1 1718 201 243 0 0 chrX 148566725 148566762 -18083534 + (CAT)n Simple_repeat Simple_repeat 2 38 0 1 1718 288 77 0 0 chrX 148567976 148568015 -18082281 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 1 1718 336 255 105 11 chrX 148568015 148568110 -18082186 - PB1D10 SINE Alu -13 104 1 1 1718 272 276 26 13 chrX 148568110 148568187 -18082109 + MIR3 SINE MIR 110 187 -21 1 1718 482 337 146 12 chrX 148568471 148568801 -18081495 - L3 LINE CR1 -27 4462 4089 1 1718 425 294 62 42 chrX 148568912 148569153 -18081143 - L4 LINE RTE -89 1940 1695 1 1718 279 204 0 0 chrX 148569613 148569662 -18080634 - B1F1 SINE Alu -99 50 2 1 1718 306 289 202 0 chrX 148569662 148569723 -18080573 - ID SINE ID -142 82 1 1 1718 446 159 8 0 chrX 148570301 148570427 -18079869 + (CA)n Simple_repeat Simple_repeat 2 128 0 1 1718 534 311 20 62 chrX 148570524 148570719 -18079577 - MTE2b LTR MaLR -192 187 1 1 1718 5683 247 61 33 chrX 148570720 148570884 -18079412 - MTE2b-int LTR MaLR -1 1579 1413 1 1718 971 251 29 0 chrX 148570884 148571091 -18079205 + B3 SINE B2 2 214 -2 1 1718 5683 247 61 33 chrX 148571091 148572444 -18077852 - MTE2b-int LTR MaLR -168 1412 20 1 1718 844 137 71 7 chrX 148572448 148572588 -18077708 + B1_Mur1 SINE Alu 1 149 0 1 1718 1485 217 82 20 chrX 148572669 148573022 -18077274 - MTE2b LTR MaLR -4 375 1 1 1718 414 240 25 141 chrX 148573038 148573094 -18077202 - MLT1C LTR MaLR -247 220 182 1 1718 279 291 38 0 chrX 148573094 148573173 -18077123 - ID4 SINE ID 0 83 2 1 1718 414 240 25 141 chrX 148573173 148573315 -18076981 - MLT1C LTR MaLR -286 181 45 1 1718 199 200 61 15 chrX 148573341 148573407 -18076889 + L2a LINE L2 3276 3344 -82 1 1718 1688 173 29 44 chrX 148573418 148573804 -18076492 - Lx9 LINE L1 -8 7636 7257 1 1718 3980 91 7 0 chrX 148573804 148574377 -18075919 - MT2B2 LTR ERVL 0 584 8 1 1718 486 198 0 0 chrX 148574378 148574459 -18075837 - Lx9 LINE L1 -383 7261 7181 1 1718 270 284 74 0 chrX 148574462 148574543 -18075753 + L2a LINE L2 3335 3421 -5 1 1718 183 229 0 77 chrX 148574696 148574748 -18075548 - L2c LINE L2 -16 3371 3324 1 1718 363 365 22 17 chrX 148574789 148574970 -18075326 + MIR SINE MIR 81 262 0 1 1718 789 258 39 70 chrX 148575004 148575145 -18075151 - L1MB7 LINE L1 0 6184 6059 1 1718 1470 78 5 0 chrX 148575145 148575337 -18074959 + B2_Mm1a SINE B2 1 193 0 1 1718 789 258 39 70 chrX 148575337 148575578 -18074718 - L1MB7 LINE L1 -126 6058 5814 1 1718 406 265 71 0 chrX 148575696 148575794 -18074502 - PB1D10 SINE Alu 0 117 13 1 1718 849 198 144 5 chrX 148575829 148576017 -18074279 - B3 SINE B2 0 216 3 1 1718 717 255 82 44 chrX 148576017 148576355 -18073941 - L1MB7 LINE L1 -361 5803 5433 1 1718 1155 96 72 0 chrX 148576378 148576544 -18073752 + B2_Mm1t SINE B2 2 179 -14 2 1718 331 111 0 36 chrX 148576576 148576632 -18073664 + B2_Mm2 SINE B2 47 100 -95 2 1718 800 80 0 0 chrX 148576708 148576821 -18073475 + B3A SINE B2 15 127 -71 2 1718 444 37 0 0 chrX 148576843 148576897 -18073399 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1718 211 54 54 0 chrX 148576897 148576934 -18073362 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2 1718 213 321 0 0 chrX 148577334 148577390 -18072906 + CT-rich Low_complexity Low_complexity 1 56 0 2 1718 1014 215 25 5 chrX 148577390 148577591 -18072705 - B3 SINE B2 -11 205 1 2 1718 468 310 0 0 chrX 148577607 148577736 -18072560 - B1F SINE Alu 0 149 21 2 1718 345 100 0 0 chrX 148578110 148578160 -18072136 + (TGG)n Simple_repeat Simple_repeat 3 52 0 2 1718 255 175 16 16 chrX 148578635 148578699 -18071597 + G-rich Low_complexity Low_complexity 6 69 0 2 1718 318 106 0 0 chrX 148578770 148578817 -18071479 + (CGG)n Simple_repeat Simple_repeat 2 48 0 2 1718 31 82 0 0 chrX 148578875 148578948 -18071348 + GC_rich Low_complexity Low_complexity 1 73 0 2 1718 268 326 1 10 chrX 148580530 148580629 -18069667 + MIR SINE MIR 11 109 -159 2 1718 194 227 76 0 chrX 148581103 148581169 -18069127 + L3 LINE CR1 4176 4246 -243 2 1718 356 311 48 16 chrX 148581610 148581795 -18068501 - MIR3 SINE MIR -67 201 17 2 1718 194 297 75 47 chrX 148582256 148582362 -18067934 - MIRb SINE MIR -75 193 85 2 1718 622 271 23 70 chrX 148583754 148584012 -18066284 - MIR SINE MIR 0 262 17 2 1718 255 195 121 12 chrX 148584034 148584117 -18066179 - MIRb SINE MIR -62 206 115 2 1718 817 224 91 25 chrX 148584583 148584780 -18065516 - B3 SINE B2 -5 211 2 2 1718 1349 102 5 5 chrX 148584797 148584985 -18065311 - B2_Mm2 SINE B2 -6 189 2 2 1718 967 200 108 0 chrX 148585066 148585261 -18065035 - B3 SINE B2 0 216 1 2 1718 1378 108 113 0 chrX 148585326 148585529 -18064767 + URR1A DNA MER1_type 1 226 0 2 1718 180 379 0 0 chrX 148585531 148585597 -18064699 - L2c LINE L2 -8 3367 3302 2 1718 1219 55 0 0 chrX 148585893 148586039 -18064257 + B1_Mus2 SINE Alu 2 147 0 2 1718 1897 139 55 23 chrX 148586826 148587172 -18063124 - ORR1B2 LTR MaLR -9 358 2 2 1718 313 282 0 0 chrX 148587846 148587924 -18062372 - L2c LINE L2 -228 3159 3082 2 1718 799 239 63 15 chrX 148588257 148588556 -18061740 + L1MA4 LINE L1 5654 5978 -325 2 1718 348 169 0 0 chrX 148588556 148588627 -18061669 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 1718 1132 218 18 68 chrX 148588627 148588907 -18061389 + B4A SINE B4 2 267 -25 2 1718 473 99 12 0 chrX 148588912 148588993 -18061303 + (CA)n Simple_repeat Simple_repeat 1 82 0 2 1718 316 188 47 0 chrX 148589137 148589201 -18061095 + PB1D9 SINE Alu 21 87 -33 2 1718 222 365 29 14 chrX 148589968 148590107 -18060189 + MIRb SINE MIR 37 177 -91 2 1718 222 307 67 50 chrX 148590171 148590291 -18060005 + L4 LINE RTE 1688 1809 -220 2 1718 330 121 0 0 chrX 148590328 148590394 -18059902 + (TC)n Simple_repeat Simple_repeat 1 66 0 2 1718 1185 130 5 5 chrX 148590639 148590832 -18059464 - URR1B DNA MER1_type 0 225 33 2 1718 477 183 19 32 chrX 148591028 148591138 -18059158 + PB1 SINE Alu 1 120 -7 2 1718 1372 250 33 15 chrX 148591193 148591583 -18058713 - L1MA5 LINE L1 0 6300 5904 2 1718 248 246 18 0 chrX 148591639 148591696 -18058600 + AluF_3 SINE Alu 137 194 -117 2 1718 543 31 0 0 chrX 148591812 148591877 -18058419 + (TTC)n Simple_repeat Simple_repeat 1 65 0 2 1718 242 279 88 24 chrX 148591889 148592014 -18058282 - HAL1 LINE L1 -1206 1301 1169 2 1718 435 19 0 0 chrX 148592302 148592354 -18057942 + (GGAA)n Simple_repeat Simple_repeat 4 55 0 2 1718 642 286 0 7 chrX 148592403 148592551 -18057745 - RSINE1 SINE B4 -18 147 1 2 1718 1171 152 74 20 chrX 148593644 148593839 -18056457 + B3 SINE B2 4 209 -7 2 1718 216 86 0 0 chrX 148593839 148593874 -18056422 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2 1718 224 329 0 0 chrX 148594085 148594158 -18056138 + PB1D10 SINE Alu 38 110 -7 2 1718 225 307 185 11 chrX 148594184 148594362 -18055934 + MIRb SINE MIR 60 268 0 2 1718 392 308 26 0 chrX 148594628 148594745 -18055551 + PB1D9 SINE Alu 1 120 0 2 1718 654 290 107 37 chrX 148594929 148595279 -18055017 - HAL1 LINE L1 -1045 1462 1081 2 1718 808 218 0 90 chrX 148595279 148595491 -18054805 - B2_Mm2 SINE B2 -2 193 1 2 1718 654 290 107 37 chrX 148595491 148595523 -18054773 - HAL1 LINE L1 -1427 1080 1053 2 1718 30 59 0 0 chrX 148595657 148595708 -18054588 + AT_rich Low_complexity Low_complexity 1 51 0 2 1718 1147 219 9 0 chrX 148595718 148595928 -18054368 + B3 SINE B2 2 213 -3 2 1718 251 369 117 32 chrX 148596427 148596710 -18053586 + L2c LINE L2 3081 3387 0 2 1718 880 68 240 27 chrX 148597003 148597153 -18053143 - B2_Mm2 SINE B2 -9 186 5 2 1718 2314 53 3 44 chrX 148597534 148597850 -18052446 - L1_Mus1 LINE L1 -1 6566 6264 2 1718 1302 98 4 4 chrX 148598172 148598426 -18051870 + (TAGA)n Simple_repeat Simple_repeat 1 254 0 2 1718 704 190 65 7 chrX 148598537 148598675 -18051621 - B1_Mus1 SINE Alu -1 147 2 2 1718 293 287 59 0 chrX 148598689 148598790 -18051506 - MIR3 SINE MIR -21 187 81 2 1718 1761 167 125 5 chrX 148598920 148599287 -18051009 - MTD LTR MaLR -8 411 1 2 1718 228 100 0 0 chrX 148599554 148599594 -18050702 + (ATG)n Simple_repeat Simple_repeat 1 40 0 2 1718 294 29 0 0 chrX 148600199 148600234 -18050062 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1718 386 275 9 52 chrX 148600244 148600359 -18049937 + MIRb SINE MIR 43 152 -116 2 1718 221 333 14 0 chrX 148600937 148601009 -18049287 + MIR3 SINE MIR 105 177 -31 2 1718 378 239 160 69 chrX 148601057 148601201 -18049095 - MIRb SINE MIR -77 191 35 2 1718 213 291 69 17 chrX 148601254 148601369 -18048927 + L2a LINE L2 2943 3069 -357 2 1718 740 100 18 9 chrX 148601918 148602029 -18048267 + PB1D9 SINE Alu 2 113 -7 2 1718 337 365 67 27 chrX 148602429 148602578 -18047718 - MER91A DNA Tip100 -36 160 6 2 1718 196 296 49 12 chrX 148603161 148603243 -18047053 - MIRc SINE MIR -62 206 122 2 1718 869 147 7 7 chrX 148603496 148603640 -18046656 + B1_Mur2 SINE Alu 6 149 0 2 1718 323 235 39 39 chrX 148604233 148604335 -18045961 + RMER30 DNA MER1_type 5 106 -96 2 1718 931 241 124 0 chrX 148604335 148604592 -18045704 + B4A SINE B4 4 292 0 2 1718 389 179 0 12 chrX 148604592 148604677 -18045619 + (CA)n Simple_repeat Simple_repeat 1 84 0 2 1718 267 297 14 0 chrX 148604688 148604762 -18045534 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 1718 230 333 24 12 chrX 148604765 148604850 -18045446 - Charlie12 DNA MER1_type -2771 102 17 2 1718 241 336 48 16 chrX 148604876 148605000 -18045296 + MIRb SINE MIR 13 140 -128 2 1718 198 254 42 0 chrX 148605359 148605430 -18044866 + MIRc SINE MIR 74 147 -121 2 1718 185 360 11 0 chrX 148605884 148605973 -18044323 + MIR3 SINE MIR 109 198 -10 2 1718 254 250 0 14 chrX 148607647 148607716 -18042580 - MLT1M LTR MaLR 0 672 605 2 1718 668 138 88 3 chrX 148608147 148608286 -18042010 + B1_Mus1 SINE Alu 1 147 -1 2 1718 270 314 14 0 chrX 148608432 148608502 -18041794 - ID4_ SINE ID 0 83 13 2 1718 535 207 98 16 chrX 148608567 148608690 -18041606 - B1_Mur1 SINE Alu -14 135 3 2 1718 182 300 99 14 chrX 148609628 148609699 -18040597 - L2c LINE L2 -228 3159 3083 2 1718 212 331 141 43 chrX 148610086 148610342 -18039954 - L2b LINE L2 -45 3330 3050 2 1718 1217 72 72 62 chrX 148610361 148610536 -18039760 + L1Md_F2 LINE L1 6373 6553 -29 2 1718 1616 36 0 20 chrX 148610536 148610732 -18039564 + B2_Mm1a SINE B2 2 193 0 2 1718 1217 72 72 62 chrX 148610732 148610764 -18039532 + L1Md_F2 LINE L1 6554 6582 0 2 1718 352 286 9 28 chrX 148610844 148610952 -18039344 + PB1D10 SINE Alu 12 117 0 2 1718 409 240 180 23 chrX 148611788 148611916 -18038380 + B1F1 SINE Alu 1 148 -1 2 1718 361 255 63 11 chrX 148611943 148612040 -18038256 + PB1D10 SINE Alu 1 113 -4 2 1718 342 226 137 0 chrX 148612318 148612420 -18037876 + PB1D7 SINE Alu 1 116 -4 2 1718 382 256 8 17 chrX 148614652 148614771 -18035525 + CT-rich Low_complexity Low_complexity 1 118 0 2 1718 432 0 0 0 chrX 148615127 148615175 -18035121 + (TTCC)n Simple_repeat Simple_repeat 1 48 0 2 1718 323 298 37 74 chrX 148615175 148615338 -18034958 - HAL1-3A_ME LINE L1 -420 2438 2282 2 1718 309 309 96 51 chrX 148615351 148615508 -18034788 - HAL1-3A_ME LINE L1 -413 2445 2282 2 1718 185 352 33 0 chrX 148615874 148615965 -18034331 - L2c LINE L2 -240 3147 3054 2 1718 328 299 38 94 chrX 148616013 148616172 -18034124 + MT2B LTR ERVL 108 257 -344 2 1718 798 204 7 21 chrX 148616075 148616220 -18034076 + B1_Mur1 SINE Alu 7 149 0 2 1718 367 309 77 31 chrX 148616491 148616621 -18033675 + L1M5 LINE L1 3070 3205 -2941 2 1718 1427 69 0 26 chrX 148616621 148616815 -18033481 + B2_Mm1a SINE B2 3 191 -2 2 1718 323 326 92 59 chrX 148616838 148616893 -18033403 + L1M5 LINE L1 3297 3358 -2788 2 1718 186 43 0 0 chrX 148616893 148616916 -18033380 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1718 323 326 92 59 chrX 148616916 148617098 -18033198 + L1M5 LINE L1 3359 3541 -2605 2 1718 327 296 25 42 chrX 148617185 148617305 -18032991 + PB1 SINE Alu 10 127 0 2 1718 410 314 0 48 chrX 148617591 148617715 -18032581 + ID_B1 SINE B4 87 204 -20 2 1718 252 281 68 135 chrX 148617715 148617739 -18032557 + B1_Mur3 SINE Alu 6 143 -6 2 1718 846 206 97 5 chrX 148617785 148617980 -18032316 + B3 SINE B2 1 213 -3 2 1718 815 94 20 0 chrX 148618200 148618349 -18031947 + RMER17B LTR ERVK 312 463 -495 2 1718 21 0 0 0 chrX 148618480 148618501 -18031795 + AT_rich Low_complexity Low_complexity 1 21 0 3 1718 780 143 81 22 chrX 148618785 148618921 -18031375 + B1_Mur4 SINE Alu 2 145 -5 3 1718 254 262 81 20 chrX 148619104 148619252 -18031044 + L1MD LINE L1 4558 4714 -1432 3 1718 967 223 15 19 chrX 148619301 148619507 -18030789 + B3 SINE B2 2 206 -10 3 1718 267 240 35 130 chrX 148619724 148619839 -18030457 + MT2B LTR ERVL 149 252 -349 3 1718 763 204 7 7 chrX 148619749 148619887 -18030409 + B1_Mur2 SINE Alu 9 146 -3 3 1718 232 300 18 99 chrX 148619905 148620016 -18030280 + ID_B1 SINE B4 78 179 -45 3 1718 458 252 0 65 chrX 148619919 148620042 -18030254 + PB1 SINE Alu 13 127 0 3 1718 331 272 42 106 chrX 148620074 148620263 -18030033 + L1MC LINE L1 5145 5321 -825 3 1718 566 237 42 35 chrX 148620277 148620421 -18029875 + B1F SINE Alu 5 149 0 3 1718 377 277 10 0 chrX 148620689 148620790 -18029506 - PB1D10 SINE Alu 0 117 16 3 1718 593 80 0 11 chrX 148621017 148621106 -18029190 + (TC)n Simple_repeat Simple_repeat 1 88 0 3 1718 387 60 0 0 chrX 148621106 148621156 -18029140 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1718 436 147 0 29 chrX 148621198 148621268 -18029028 - B1_Mur2 SINE Alu -1 148 81 3 1718 367 245 122 9 chrX 148621284 148621391 -18028905 - B3A SINE B2 -79 119 1 3 1718 1026 191 69 0 chrX 148621444 148621633 -18028663 - B3 SINE B2 -13 203 2 3 1718 288 133 0 0 chrX 148621779 148621824 -18028472 + B3A SINE B2 1 45 -153 3 1718 225 317 118 47 chrX 148621838 148622007 -18028289 - L2b LINE L2 -88 3287 3107 3 1718 385 282 106 13 chrX 148622108 148622259 -18028037 + MIRc SINE MIR 57 221 -47 3 1718 391 310 69 43 chrX 148622861 148623103 -18027193 - L2c LINE L2 -92 3283 3032 3 1718 469 285 7 99 chrX 148623146 148623298 -18026998 + Charlie4z DNA MER1_type 27 164 -3 3 1718 324 96 19 37 chrX 148623385 148623439 -18026857 + U2 snRNA snRNA 1 53 -135 3 1718 630 243 44 50 chrX 148623425 148623585 -18026711 + ID_B1 SINE B4 59 217 -7 3 1718 240 240 20 0 chrX 148623652 148623702 -18026594 + MER91B DNA Tip100 23 73 -117 3 1718 988 96 0 0 chrX 148624149 148624284 -18026012 + B1_Mur3 SINE Alu 9 143 -6 3 1718 238 250 261 0 chrX 148624703 148624791 -18025505 - L2a LINE L2 0 3426 3316 3 1718 592 348 16 16 chrX 148625218 148625408 -18024888 - RMER30 DNA MER1_type -4 198 9 3 1718 591 339 153 34 chrX 148625477 148626325 -18023971 - L2c LINE L2 -938 2481 1533 3 1718 453 300 115 2 chrX 148626595 148626788 -18023508 - MIR SINE MIR -26 236 30 3 1718 217 263 24 84 chrX 148627017 148627100 -18023196 - MIRb SINE MIR -73 195 118 3 1718 240 216 20 0 chrX 148627547 148627598 -18022698 - MIRb SINE MIR -82 186 135 3 1718 329 200 25 0 chrX 148627667 148627747 -18022549 + T-rich Low_complexity Low_complexity 2 83 0 3 1718 271 240 92 13 chrX 148627747 148627823 -18022473 - ID4_ SINE ID 0 83 2 3 1718 250 298 154 0 chrX 148628005 148628109 -18022187 + MIRb SINE MIR 103 222 -46 3 1718 213 178 0 0 chrX 148628408 148628453 -18021843 + GA-rich Low_complexity Low_complexity 1 45 0 3 1718 283 282 61 35 chrX 148629371 148629485 -18020811 + MIR3 SINE MIR 76 192 -16 3 1718 1020 92 7 0 chrX 148629808 148629950 -18020346 + URR1A DNA MER1_type 84 226 0 3 1718 1356 41 52 0 chrX 148630893 148631065 -18019231 + B2_Mm2 SINE B2 1 181 -14 3 1718 236 244 23 103 chrX 148631849 148631936 -18018360 - ID SINE ID -140 84 5 3 1718 218 174 90 50 chrX 148632108 148632189 -18018107 - MIR SINE MIR -184 84 3 3 1718 544 307 56 15 chrX 148632799 148632994 -18017302 + MIRb SINE MIR 42 244 -24 3 1718 232 312 112 35 chrX 148633604 148633747 -18016549 + MIRb SINE MIR 51 204 -64 3 1718 183 283 38 0 chrX 148633815 148633868 -18016428 - L2c LINE L2 -243 3144 3090 3 1718 233 219 0 0 chrX 148633938 148633979 -18016317 + L2a LINE L2 2861 2901 -518 3 1718 1708 206 111 0 chrX 148633989 148634364 -18015932 - MTD LTR MaLR -13 406 2 3 1718 248 385 166 17 chrX 148634366 148634593 -18015703 + L2a LINE L2 2924 3185 -241 3 1718 240 294 0 0 chrX 148634593 148634661 -18015635 + ID4 SINE ID 3 70 -13 3 1718 248 373 6 24 chrX 148634661 148634708 -18015588 + L2a LINE L2 3186 3231 -195 3 1718 203 156 0 0 chrX 148634721 148634753 -18015543 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1718 360 0 0 0 chrX 148634812 148634852 -18015444 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 1718 242 283 76 50 chrX 148634945 148635064 -18015232 - L2c LINE L2 -528 2891 2770 3 1718 242 347 13 0 chrX 148635558 148635633 -18014663 + MIR SINE MIR 9 84 -178 3 1719 360 103 0 0 chrX 148636734 148636792 -18013504 + (CAG)n Simple_repeat Simple_repeat 1 58 0 3 1719 182 65 65 0 chrX 148638028 148638059 -18012237 + (GGGA)n Simple_repeat Simple_repeat 4 36 0 3 1719 321 196 22 36 chrX 148638163 148638301 -18011995 + CT-rich Low_complexity Low_complexity 3 138 0 3 1719 262 170 0 0 chrX 148639069 148639120 -18011176 + B1F SINE Alu 15 65 -52 3 1719 363 263 0 0 chrX 148639168 148639244 -18011052 + ID4 SINE ID 8 83 0 3 1719 455 263 0 21 chrX 148639289 148639386 -18010910 + RSINE1 SINE B4 1 95 -70 3 1719 279 0 0 0 chrX 148639424 148639455 -18010841 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1719 633 248 0 0 chrX 148639458 148639579 -18010717 - B3A SINE B2 -77 121 1 3 1719 732 241 100 0 chrX 148639609 148639779 -18010517 - B3 SINE B2 -5 211 25 3 1719 2324 165 29 10 chrX 148639783 148640194 -18010102 + MTD LTR MaLR 1 419 0 3 1719 497 128 138 0 chrX 148640194 148640288 -18010008 + MTD-int LTR MaLR 1 107 -1151 3 1719 211 230 114 63 chrX 148640237 148640316 -18009980 - B2_Mm2 SINE B2 -112 83 1 3 1719 275 278 0 100 chrX 148640317 148640397 -18009899 + RSINE1 SINE B4 93 164 -1 3 1719 316 271 229 33 chrX 148640487 148640609 -18009687 - MIRb SINE MIR -3 265 120 3 1719 242 306 148 55 chrX 148640916 148641099 -18009197 + MIR SINE MIR 42 241 -21 3 1719 243 240 5 0 chrX 148641492 148641545 -18008751 - MLT1F LTR MaLR 0 549 495 3 1719 639 241 18 31 chrX 148641557 148641720 -18008576 + RSINE1 SINE B4 3 163 -2 3 1719 366 202 156 21 chrX 148641807 148641903 -18008393 - PB1D10 SINE Alu -2 115 7 3 1719 645 319 204 15 chrX 148641903 148642314 -18007982 - MLT1F LTR MaLR -55 493 5 3 1719 21 36 0 0 chrX 148642617 148642645 -18007651 + AT_rich Low_complexity Low_complexity 1 28 0 3 1719 533 191 68 126 chrX 148642654 148642966 -18007330 + Lx7 LINE L1 7288 7696 0 3 1719 545 146 126 0 chrX 148643014 148643117 -18007179 + B3 SINE B2 88 203 -13 3 1719 258 136 0 0 chrX 148643204 148643248 -18007048 + (TCCCC)n Simple_repeat Simple_repeat 5 48 0 3 1719 549 273 0 14 chrX 148644369 148644510 -18005786 + B1F SINE Alu 5 143 -6 3 1719 201 364 111 0 chrX 148644550 148644649 -18005647 + MIR3 SINE MIR 1 110 -98 3 1719 262 321 30 28 chrX 148644723 148644857 -18005439 + MIR3 SINE MIR 47 181 -27 3 1719 187 277 0 71 chrX 148644831 148644901 -18005395 - MIRm SINE MIR -11 265 201 3 1719 209 246 0 87 chrX 148645055 148645151 -18005145 - MIR SINE MIR -135 133 49 3 1719 301 317 110 21 chrX 148645966 148646111 -18004185 + HAL1-3A_ME LINE L1 2282 2439 -419 3 1719 199 175 24 48 chrX 148646314 148646356 -18003940 + MIRm SINE MIR 118 158 -118 3 1719 547 170 0 11 chrX 148646810 148646905 -18003391 + B1_Mus2 SINE Alu 42 135 -12 3 1719 281 47 23 0 chrX 148646906 148646949 -18003347 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 1719 234 269 0 60 chrX 148647089 148647172 -18003124 + ID4 SINE ID 5 82 -1 3 1719 200 242 0 101 chrX 148647180 148647249 -18003047 - MIR SINE MIR -96 166 105 3 1719 314 333 36 0 chrX 148647377 148647503 -18002793 + MIRb SINE MIR 18 151 -117 3 1719 429 247 0 0 chrX 148647511 148647588 -18002708 + ID4_ SINE ID 1 77 -6 3 1719 191 276 91 13 chrX 148647597 148647674 -18002622 + MIRb SINE MIR 145 227 -41 3 1719 397 243 14 0 chrX 148648203 148648273 -18002023 + ID4 SINE ID 13 83 0 3 1719 216 0 0 0 chrX 148648332 148648356 -18001940 + (CAAAA)n Simple_repeat Simple_repeat 5 28 0 3 1719 187 341 0 0 chrX 148648500 148648544 -18001752 - L2c LINE L2 -3 3372 3329 3 1719 952 189 25 15 chrX 148648597 148648801 -18001495 + MER2 DNA MER2_type 59 264 -81 3 1719 284 344 33 0 chrX 148648835 148648925 -18001371 + MER2 DNA MER2_type 249 341 -4 3 1719 410 136 59 15 chrX 148648931 148648972 -18001324 - PB1D9 SINE Alu 0 117 10 3 1719 348 155 17 0 chrX 148648972 148649030 -18001266 - ID_B1 SINE B4 -75 149 91 3 1719 243 0 0 0 chrX 148649067 148649094 -18001202 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1719 218 189 0 0 chrX 148649191 148649228 -18001068 + ID2 SINE ID 45 81 -2 3 1719 747 278 0 31 chrX 148649287 148649447 -18000849 - RSINE1 SINE B4 -8 157 3 3 1719 304 319 55 12 chrX 148649540 148649705 -18000591 - L1M5 LINE L1 -328 5796 5625 3 1719 228 328 29 109 chrX 148650217 148650354 -17999942 + MIRb SINE MIR 101 226 -42 3 1719 270 330 140 37 chrX 148650441 148650762 -17999534 - L2c LINE L2 -11 3376 3023 3 1719 726 233 20 0 chrX 148651535 148651681 -17998615 - B1_Mur2 SINE Alu 0 149 1 3 1719 380 207 177 48 chrX 148651831 148651978 -17998318 - MER20 DNA MER1_type -1 218 53 3 1719 383 282 0 0 chrX 148652257 148652335 -17997961 + ID4_ SINE ID 5 82 -1 3 1719 241 305 85 0 chrX 148652425 148652507 -17997789 - MIRm SINE MIR -27 249 161 3 1719 262 324 14 0 chrX 148652442 148652516 -17997780 - L2c LINE L2 -35 3352 3278 3 1719 320 307 39 29 chrX 148652537 148652641 -17997655 + PB1D7 SINE Alu 6 110 -10 3 1719 216 265 174 14 chrX 148652733 148652802 -17997494 + ID4_ SINE ID 1 80 -3 3 1719 195 312 16 0 chrX 148653942 148654006 -17996290 - L2c LINE L2 -558 2861 2797 3 1719 328 304 26 18 chrX 148654016 148654130 -17996166 + PB1 SINE Alu 5 119 -8 3 1719 327 25 0 0 chrX 148654141 148654181 -17996115 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1719 269 274 0 0 chrX 148654554 148654605 -17995691 - L3 LINE CR1 -106 4383 4333 4 1719 443 250 0 43 chrX 148654851 148654968 -17995328 + PB1D10 SINE Alu 1 112 -5 4 1719 601 119 18 9 chrX 148655011 148655121 -17995175 + (GGAGA)n Simple_repeat Simple_repeat 5 115 0 4 1719 343 320 130 11 chrX 148655560 148655737 -17994559 + MIRb SINE MIR 42 239 -29 4 1719 186 71 0 0 chrX 148656454 148656482 -17993814 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1719 374 286 9 9 chrX 148656589 148656695 -17993601 + CT-rich Low_complexity Low_complexity 2 107 0 4 1719 261 272 2 55 chrX 148657162 148657328 -17992968 + MIR SINE MIR 85 230 -32 4 1719 222 37 0 0 chrX 148657676 148657703 -17992593 + (CCA)n Simple_repeat Simple_repeat 1 27 0 4 1719 334 283 0 38 chrX 148658203 148658335 -17991961 + C-rich Low_complexity Low_complexity 4 130 0 4 1719 26 0 0 0 chrX 148659498 148659524 -17990772 + AT_rich Low_complexity Low_complexity 1 26 0 4 1719 262 310 171 0 chrX 148660878 148661007 -17989289 + MIRb SINE MIR 76 226 -42 4 1719 735 294 67 15 chrX 148661062 148661363 -17988933 - MTE-int LTR MaLR -216 1364 1041 4 1719 229 273 140 35 chrX 148661430 148661544 -17988752 - MTE-int LTR MaLR -714 866 741 4 1719 375 23 0 0 chrX 148661565 148661609 -17988687 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1719 729 264 160 16 chrX 148661611 148661861 -17988435 - B4A SINE B4 -3 289 4 4 1719 246 128 0 0 chrX 148661883 148661922 -17988374 + (TCC)n Simple_repeat Simple_repeat 1 39 0 4 1719 848 163 0 34 chrX 148661922 148662068 -17988228 - B1_Mus1 SINE Alu -5 143 3 4 1719 716 272 0 47 chrX 148662119 148662289 -17988007 - RSINE1 SINE B4 0 165 4 4 1719 341 297 8 23 chrX 148662419 148662550 -17987746 + CT-rich Low_complexity Low_complexity 2 130 0 4 1719 343 281 67 10 chrX 148662552 148662656 -17987640 - PB1D10 SINE Alu -7 110 1 4 1719 507 216 51 29 chrX 148662699 148662837 -17987459 + B1F1 SINE Alu 1 141 -8 4 1719 853 206 141 11 chrX 148662841 148663032 -17987264 - B3 SINE B2 0 216 1 4 1719 243 213 21 0 chrX 148663051 148663098 -17987198 - B1_Mur1 SINE Alu -42 107 60 4 1719 573 179 168 16 chrX 148663160 148663285 -17987011 + B1_Mur4 SINE Alu 6 149 -1 4 1719 260 342 13 13 chrX 148663309 148663386 -17986910 + ID4_ SINE ID 5 81 -2 4 1719 250 140 140 0 chrX 148663419 148663469 -17986827 - L1MC4 LINE L1 -1050 6992 6936 4 1719 904 155 0 7 chrX 148663500 148663643 -17986653 - B1_Mur4 SINE Alu 0 150 9 4 1719 207 133 0 0 chrX 148663698 148663743 -17986553 + (T)n Simple_repeat Simple_repeat 1 45 0 4 1719 337 324 0 0 chrX 148663791 148663893 -17986403 + PB1D7 SINE Alu 5 106 -14 4 1719 509 186 58 10 chrX 148663900 148664003 -17986293 + PB1D10 SINE Alu 10 117 0 4 1719 345 178 92 82 chrX 148664017 148664115 -17986181 - L1MC4 LINE L1 -943 7099 7001 4 1719 204 40 0 0 chrX 148664115 148664140 -17986156 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 4 1719 1154 54 0 13 chrX 148664151 148664300 -17985996 - B1_Mus1 SINE Alu -1 147 1 4 1719 427 353 0 25 chrX 148664465 148664587 -17985709 + PB1 SINE Alu 1 119 -8 4 1719 441 95 0 0 chrX 148664589 148664652 -17985644 + (GAGAA)n Simple_repeat Simple_repeat 2 64 0 4 1719 782 199 182 0 chrX 148664675 148664851 -17985445 + B3 SINE B2 4 211 -5 4 1719 21 36 0 0 chrX 148664856 148664884 -17985412 + AT_rich Low_complexity Low_complexity 1 28 0 4 1719 495 252 0 34 chrX 148664972 148665091 -17985205 + PB1D10 SINE Alu 1 115 -2 4 1719 247 339 0 0 chrX 148665177 148665236 -17985060 + ID2 SINE ID 2 60 -23 4 1719 386 221 173 0 chrX 148665547 148665651 -17984645 + MIRb SINE MIR 41 162 -106 4 1719 1201 49 0 0 chrX 148665691 148665835 -17984461 - B1_Mus1 SINE Alu 0 148 5 4 1719 1259 118 10 36 chrX 148665870 148666032 -17984264 + B2_Mm2 SINE B2 3 162 -33 4 1719 186 71 0 0 chrX 148666032 148666060 -17984236 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 4 1719 1259 118 10 36 chrX 148666060 148666091 -17984205 + B2_Mm2 SINE B2 163 191 -4 4 1719 264 287 138 9 chrX 148666101 148666210 -17984086 - MIRb SINE MIR -67 201 79 4 1719 670 204 52 15 chrX 148666569 148666703 -17983593 - B1_Mur3 SINE Alu -7 142 4 4 1719 381 143 28 14 chrX 148666731 148666802 -17983494 - B1_Mur4 SINE Alu -77 73 2 4 1719 225 65 0 0 chrX 148666817 148666848 -17983448 + (CTA)n Simple_repeat Simple_repeat 2 32 0 4 1719 361 231 4 13 chrX 148666848 148666926 -17983370 - PB1D10 SINE Alu -8 112 32 4 1719 222 255 0 0 chrX 148667379 148667426 -17982870 + (CG)n Simple_repeat Simple_repeat 2 48 0 4 1719 302 287 43 0 chrX 148668622 148668737 -17981559 + MIRb SINE MIR 8 127 -141 4 1719 253 250 0 0 chrX 148669774 148669822 -17980474 + (TCCG)n Simple_repeat Simple_repeat 2 49 0 4 1719 255 31 0 0 chrX 148670465 148670497 -17979799 + (T)n Simple_repeat Simple_repeat 1 32 0 4 1719 391 320 148 6 chrX 148670694 148670870 -17979426 + MIR3 SINE MIR 1 201 -7 4 1719 272 130 0 0 chrX 148670907 148670964 -17979332 - B2_Mm2 SINE B2 -115 101 45 4 1719 1354 74 17 0 chrX 148670997 148671173 -17979123 - B2_Mm1t SINE B2 -13 180 2 4 1719 422 248 132 0 chrX 148671667 148671796 -17978500 - MIRc SINE MIR -91 177 32 4 1719 216 0 0 0 chrX 148672625 148672649 -17977647 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 1719 369 62 0 0 chrX 148672651 148672699 -17977597 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 1719 573 228 29 14 chrX 148673581 148673719 -17976577 - ID_B1 SINE B4 -1 223 84 4 1719 245 200 44 111 chrX 148674818 148674908 -17975388 - B1F SINE Alu 0 149 66 4 1719 225 268 84 0 chrX 148675036 148675107 -17975189 - ID_B1 SINE B4 0 224 148 4 1719 1183 61 7 0 chrX 148675124 148675271 -17975025 + B1_Mus1 SINE Alu 1 148 0 4 1719 263 261 58 0 chrX 148675285 148675354 -17974942 - ID_B1 SINE B4 -71 153 81 4 1719 337 227 0 0 chrX 148675442 148675508 -17974788 - RSINE1 SINE B4 -33 132 67 4 1719 352 109 170 13 chrX 148675565 148675677 -17974619 - B2_Mm2 SINE B2 0 195 46 4 1719 1283 82 65 0 chrX 148675722 148675892 -17974404 - B2_Mm2 SINE B2 -13 182 2 4 1719 180 0 0 0 chrX 148675924 148675944 -17974352 + (ATTG)n Simple_repeat Simple_repeat 1 20 0 4 1719 651 239 18 59 chrX 148676183 148676352 -17973944 + RSINE1 SINE B4 4 165 0 4 1719 725 193 20 7 chrX 148676977 148677123 -17973173 - B1_Mur3 SINE Alu 0 149 2 4 1719 356 193 0 24 chrX 148677221 148677306 -17972990 + (TATG)n Simple_repeat Simple_repeat 2 84 0 4 1719 1005 295 105 44 chrX 148677311 148677673 -17972623 - Lx9 LINE L1 -301 7343 6960 4 1719 699 59 10 0 chrX 148677787 148677888 -17972408 - B2_Mm1a SINE B2 -1 192 91 4 1719 633 90 0 0 chrX 148677933 148678022 -17972274 + (TTTCC)n Simple_repeat Simple_repeat 3 91 0 4 1719 1187 56 0 0 chrX 148678048 148678191 -17972105 + B1_Mus1 SINE Alu 1 143 -5 4 1719 1251 148 19 15 chrX 148678242 148678448 -17971848 - B3 SINE B2 -9 207 1 4 1719 357 263 74 0 chrX 148678497 148678592 -17971704 - B3A SINE B2 -27 171 70 4 1719 1275 76 47 0 chrX 148678617 148678789 -17971507 - B2_Mm2 SINE B2 -15 180 1 4 1719 783 264 96 60 chrX 148678808 148679110 -17971186 - Lx8 LINE L1 -3 7470 7158 4 1719 440 338 70 25 chrX 148679139 148679297 -17970999 - RSINE1 SINE B4 0 165 1 4 1719 203 336 39 8 chrX 148680063 148680191 -17970105 + L2c LINE L2 2869 3001 -386 4 1719 567 14 0 0 chrX 148681234 148681305 -17968991 + B1_Mm SINE Alu 77 147 0 4 1719 306 115 0 0 chrX 148681306 148681358 -17968938 + (A)n Simple_repeat Simple_repeat 1 52 0 4 1719 397 250 83 0 chrX 148681418 148681526 -17968770 - PB1D7 SINE Alu -1 119 3 4 1719 269 250 0 32 chrX 148681603 148681665 -17968631 - ID4 SINE ID -19 64 5 4 1719 239 298 24 5 chrX 148681689 148681783 -17968513 - PB1 SINE Alu -49 98 1 4 1719 1233 103 16 11 chrX 148681906 148682092 -17968204 + B2_Mm2 SINE B2 2 188 -7 4 1719 570 197 63 0 chrX 148682308 148682435 -17967861 - B3A SINE B2 -63 135 1 4 1719 329 226 51 28 chrX 148682435 148682519 -17967777 - MTE2a LTR MaLR -39 340 258 4 1719 313 289 57 24 chrX 148682608 148682732 -17967564 - MTE2a LTR MaLR -231 128 1 4 1719 222 37 0 0 chrX 148682865 148682892 -17967404 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 4 1719 1236 41 0 0 chrX 148683567 148683713 -17966583 + B1_Mm SINE Alu 2 147 0 4 1719 410 244 126 0 chrX 148683713 148683840 -17966456 - Lx6 LINE L1 -27 7433 7291 4 1719 746 159 13 65 chrX 148683924 148684079 -17966217 - B1_Mus1 SINE Alu 0 148 2 4 1719 596 254 12 54 chrX 148684340 148684517 -17965779 + B3A SINE B2 35 190 -5 4 1719 2231 239 71 17 chrX 148684524 148685183 -17965113 - L1MA6 LINE L1 -33 6267 5573 4 1719 386 219 0 0 chrX 148685230 148685303 -17964993 - ID4_ SINE ID -3 80 8 4 1719 757 172 6 88 chrX 148685416 148685575 -17964721 - B1_Mus2 SINE Alu 0 147 2 4 1719 243 217 14 14 chrX 148685611 148685681 -17964615 - L1MA6 LINE L1 -881 5419 5350 4 1719 189 0 0 0 chrX 148685757 148685778 -17964518 + (TTG)n Simple_repeat Simple_repeat 1 21 0 4 1719 234 0 0 0 chrX 148685794 148685820 -17964476 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1719 252 0 0 0 chrX 148685900 148685928 -17964368 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 1719 320 259 0 115 chrX 148685957 148686079 -17964217 - PB1D10 SINE Alu 0 117 10 4 1719 413 220 34 0 chrX 148686089 148686207 -17964089 - L1MA6 LINE L1 -961 5182 5061 4 1719 435 16 47 0 chrX 148686263 148686327 -17963969 + (TC)n Simple_repeat Simple_repeat 2 68 0 4 1719 649 191 0 0 chrX 148686329 148686434 -17963862 - B1_Mus1 SINE Alu -43 105 1 4 1719 1216 73 79 6 chrX 148686457 148686635 -17963661 + B2_Mm1a SINE B2 2 192 -1 5 1719 319 262 57 8 chrX 148686648 148686771 -17963525 - L1MA6 LINE L1 -1128 5015 4887 4 1719 596 286 50 0 chrX 148686785 148686925 -17963371 - B1_Mur1 SINE Alu -2 147 1 5 1719 297 286 39 13 chrX 148686954 148687032 -17963264 - B1F2 SINE Alu -58 91 12 5 1719 361 295 35 26 chrX 148687242 148687357 -17962939 + PB1D7 SINE Alu 5 120 0 5 1719 681 282 103 48 chrX 148687359 148687631 -17962665 + B4A SINE B4 1 287 -5 5 1719 222 37 0 0 chrX 148687667 148687694 -17962602 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1719 462 243 0 27 chrX 148687715 148687825 -17962471 + PB1D10 SINE Alu 2 108 -9 5 1719 237 238 16 66 chrX 148687844 148687913 -17962383 + ID4 SINE ID 19 84 -68 5 1719 1181 61 0 0 chrX 148688700 148688847 -17961449 + B1_Mus1 SINE Alu 2 148 0 5 1719 869 215 67 16 chrX 148688885 148689079 -17961217 - B3 SINE B2 -10 206 3 5 1719 198 0 0 0 chrX 148689185 148689207 -17961089 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1719 22 0 0 0 chrX 148689238 148689260 -17961036 + AT_rich Low_complexity Low_complexity 1 22 0 5 1719 377 233 0 0 chrX 148689301 148689374 -17960922 + ID4_ SINE ID 8 80 -3 5 1719 1078 201 45 77 chrX 148689421 148689481 -17960815 + L1MA6 LINE L1 5573 5624 -676 5 1719 1399 43 53 26 chrX 148689481 148689670 -17960626 - B2_Mm2 SINE B2 0 195 2 5 1719 1078 201 45 77 chrX 148689670 148689922 -17960374 + L1MA6 LINE L1 5625 5875 -425 5 1719 603 275 11 37 chrX 148690173 148690445 -17959851 + MER33 DNA MER1_type 19 283 -41 5 1719 220 222 60 4 chrX 148690513 148690576 -17959720 + ID4 SINE ID 12 76 -76 5 1719 537 298 120 4 chrX 148690678 148690954 -17959342 - L1MB7 LINE L1 0 6184 5877 5 1719 443 311 22 22 chrX 148691056 148691191 -17959105 - B1F1 SINE Alu -1 148 14 5 1719 21 36 0 0 chrX 148691543 148691571 -17958725 + AT_rich Low_complexity Low_complexity 1 28 0 5 1719 243 0 0 0 chrX 148692028 148692055 -17958241 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 5 1719 235 289 68 30 chrX 148692143 148692275 -17958021 + HAL1 LINE L1 2 138 -2369 5 1719 887 226 48 19 chrX 148692307 148692515 -17957781 - B3 SINE B2 -2 214 1 5 1719 745 226 22 43 chrX 148692610 148692795 -17957501 - B3A SINE B2 -17 181 1 5 1719 324 247 0 150 chrX 148693230 148693330 -17956966 + HAL1 LINE L1 727 811 -1696 5 1719 1150 114 49 5 chrX 148693367 148693552 -17956744 + B2_Mm1a SINE B2 1 193 0 5 1719 1294 105 26 10 chrX 148693588 148693747 -17956549 + B2_Mm2 SINE B2 1 158 -37 5 1719 243 0 0 0 chrX 148693747 148693774 -17956522 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 5 1719 1294 105 26 10 chrX 148693774 148693806 -17956490 + B2_Mm2 SINE B2 159 195 0 5 1719 814 283 127 47 chrX 148693997 148694383 -17955913 + Tigger7 DNA MER2_type 47 463 -2028 5 1719 478 295 162 35 chrX 148694541 148694807 -17955489 + HAL1 LINE L1 988 1293 -1214 5 1719 1022 226 19 0 chrX 148694807 148695015 -17955281 - B3 SINE B2 -3 213 2 5 1719 478 295 162 35 chrX 148695015 148695212 -17955084 + HAL1 LINE L1 1294 1509 -998 5 1719 339 312 42 0 chrX 148695236 148695332 -17954964 + B1F1 SINE Alu 19 118 -31 5 1719 475 228 25 34 chrX 148695558 148695676 -17954620 + PB1D10 SINE Alu 1 117 0 5 1719 880 239 45 75 chrX 148695838 148696037 -17954259 - B3A SINE B2 0 195 3 5 1719 26 0 0 0 chrX 148696242 148696268 -17954028 + AT_rich Low_complexity Low_complexity 1 26 0 5 1719 231 268 14 0 chrX 148697058 148697129 -17953167 + MIRc SINE MIR 79 150 -118 5 1719 840 160 34 14 chrX 148697344 148697490 -17952806 - B1_Mur3 SINE Alu 0 149 1 5 1719 212 316 13 26 chrX 148697664 148697742 -17952554 - ID_B1 SINE B4 -68 156 80 5 1719 717 237 0 14 chrX 148697791 148697932 -17952364 + B1_Mur1 SINE Alu 3 141 -8 5 1719 572 259 141 11 chrX 148697948 148698139 -17952157 - B3 SINE B2 0 216 1 5 1719 235 245 20 0 chrX 148698332 148698381 -17951915 + ID4_ SINE ID 15 64 -19 5 1719 361 226 8 138 chrX 148698478 148698601 -17951695 + PB1D10 SINE Alu 2 108 -9 5 1719 351 0 0 0 chrX 148698700 148698739 -17951557 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 5 1719 1059 86 0 7 chrX 148698739 148698879 -17951417 - B1_Mus1 SINE Alu -9 139 1 5 1719 1045 15 0 0 chrX 148699147 148699278 -17951018 - B1_Mus2 SINE Alu 0 147 17 5 1719 484 259 98 79 chrX 148699152 148699366 -17950930 - B4 SINE B4 -71 221 4 5 1719 180 0 0 0 chrX 148699557 148699577 -17950719 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1719 1181 50 0 0 chrX 148699582 148699722 -17950574 - B1_Mus1 SINE Alu -7 141 2 5 1719 442 264 0 85 chrX 148699891 148699932 -17950364 + MT2B LTR ERVL 125 152 -449 5 1719 940 56 0 0 chrX 148699932 148700058 -17950238 + B1_Mm SINE Alu 1 126 -21 5 1719 180 0 0 0 chrX 148700273 148700293 -17950003 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1719 529 291 6 31 chrX 148700564 148700727 -17949569 - RSINE1 SINE B4 -4 161 3 5 1719 405 298 26 0 chrX 148700731 148700845 -17949451 - PB1D10 SINE Alu 0 117 1 5 1719 1388 69 37 0 chrX 148702755 148702943 -17947353 + B2_Mm2 SINE B2 1 195 0 5 1719 236 53 26 0 chrX 148703818 148703856 -17946440 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1719 457 196 0 164 chrX 148706910 148706963 -17943333 - PB1D10 SINE Alu -11 106 63 5 1719 311 0 0 25 chrX 148706963 148707003 -17943293 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1719 1182 56 0 0 chrX 148707007 148707150 -17943146 - B1_Mus1 SINE Alu -5 143 1 5 1719 457 196 0 164 chrX 148707150 148707213 -17943083 - PB1D10 SINE Alu -55 62 5 5 1719 230 322 11 22 chrX 148708000 148708089 -17942207 + C-rich Low_complexity Low_complexity 5 92 0 5 1719 25 0 0 0 chrX 148708358 148708383 -17941913 + AT_rich Low_complexity Low_complexity 1 25 0 5 1719 180 0 0 0 chrX 148708412 148708432 -17941864 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1719 258 261 0 0 chrX 148708721 148708786 -17941510 - L1ME1 LINE L1 -13 6166 6102 5 1719 491 229 248 7 chrX 148708873 148709127 -17941169 - L1MB7 LINE L1 -10 6168 5857 5 1719 267 291 8 68 chrX 148709186 148709304 -17940992 + Charlie4z DNA MER1_type 52 162 -5 5 1719 1702 148 97 9 chrX 148710083 148710425 -17939871 - MTD LTR MaLR 0 419 48 5 1719 778 96 95 8 chrX 148710620 148710746 -17939550 - B1_Mur2 SINE Alu -11 138 2 5 1719 320 300 26 43 chrX 148711487 148711602 -17938694 + PB1D9 SINE Alu 8 120 0 5 1719 548 266 244 72 chrX 148711613 148711974 -17938322 - MLT1F2 LTR MaLR -123 437 15 5 1719 1150 269 133 58 chrX 148711988 148712508 -17937788 - MLT1F2-int LTR MaLR 0 1489 931 5 1719 692 245 180 49 chrX 148712566 148712910 -17937386 - ERVL-E-int LTR ERVL -1504 4163 3775 5 1719 509 277 47 24 chrX 148712935 148713105 -17937191 - ERVL-E-int LTR ERVL -2014 3653 3480 5 1719 575 241 51 7 chrX 148713308 148713446 -17936850 + RSINE1 SINE B4 3 146 -19 5 1719 22 0 0 0 chrX 148713458 148713480 -17936816 + AT_rich Low_complexity Low_complexity 1 22 0 5 1719 1250 34 0 0 chrX 148713834 148713982 -17936314 - B1_Mus1 SINE Alu 0 148 1 5 1719 421 162 117 12 chrX 148714143 148714251 -17936045 - B1_Mus2 SINE Alu 0 149 29 5 1719 485 160 37 65 chrX 148714743 148714850 -17935446 - B3A SINE B2 -93 105 2 5 1719 542 239 8 8 chrX 148714852 148714970 -17935326 - Lx8 LINE L1 -135 7338 7221 5 1719 1027 64 0 0 chrX 148715129 148715269 -17935027 + B1_Mus1 SINE Alu 9 148 0 5 1719 291 318 18 35 chrX 148715295 148715308 -17934988 + ID_B1 SINE B4 75 119 -105 5 1719 374 235 59 0 chrX 148715308 148715393 -17934903 + B1F2 SINE Alu 5 94 -55 5 1719 291 318 18 35 chrX 148715393 148715409 -17934887 + ID_B1 SINE B4 120 186 -38 5 1719 702 216 0 20 chrX 148715410 148715561 -17934735 + B1_Mur1 SINE Alu 2 149 0 5 1719 1072 215 15 0 chrX 148715597 148715797 -17934499 + B3 SINE B2 1 203 -13 5 1719 1524 73 5 0 chrX 148715856 148716048 -17934248 + B2_Mm1a SINE B2 1 193 0 5 1719 1115 28 0 0 chrX 148716066 148716207 -17934089 + B1_Mus1 SINE Alu 8 148 0 5 1719 180 0 0 0 chrX 148716207 148716227 -17934069 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1719 723 231 33 61 chrX 148716228 148716408 -17933888 + B3 SINE B2 28 202 -14 5 1719 231 200 0 0 chrX 148716443 148716493 -17933803 + L1MB4 LINE L1 5346 5395 -783 5 1719 540 0 0 0 chrX 148717152 148717212 -17933084 + (TC)n Simple_repeat Simple_repeat 2 61 0 5 1719 342 0 0 0 chrX 148717553 148717591 -17932705 + (GTTTG)n Simple_repeat Simple_repeat 2 39 0 5 1719 1141 58 0 0 chrX 148717591 148717728 -17932568 - B1_Mus2 SINE Alu -9 138 2 5 1719 669 258 112 34 chrX 148717853 148718122 -17932174 + L1MB4 LINE L1 5845 6134 -46 5 1719 1117 45 0 0 chrX 148718124 148718256 -17932040 + B1_Mus2 SINE Alu 1 132 -15 5 1719 3562 13 5 0 chrX 148718256 148718649 -17931647 + MTA_Mm LTR MaLR 2 396 0 5 1719 783 104 0 0 chrX 148718680 148718795 -17931501 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 5 1719 3041 153 64 134 chrX 148719050 148719871 -17930425 - Lx2A1 LINE L1 -6 6632 5863 5 1719 1676 11 5 5 chrX 148719871 148720062 -17930234 - B2_Mm1a SINE B2 -2 191 1 5 1719 3041 85 2 68 chrX 148720062 148720151 -17930145 - Lx2A1 LINE L1 -1146 5862 5788 5 1719 427 108 181 11 chrX 148720151 148720245 -17930051 - B2_Mm2 SINE B2 0 195 86 5 1719 588 40 0 0 chrX 148720245 148720319 -17929977 - B1_Mus2 SINE Alu -6 141 68 5 1719 1341 157 152 10 chrX 148720318 148720608 -17929688 + ORR1B2 LTR MaLR 37 367 0 5 1719 375 290 0 0 chrX 148720608 148720698 -17929598 + PB1D10 SINE Alu 22 111 -6 5 1719 1578 57 0 5 chrX 148720708 148720903 -17929393 + B2_Mm2 SINE B2 1 194 -1 5 1719 1161 54 0 20 chrX 148720905 148721055 -17929241 + B1_Mm SINE Alu 1 147 0 5 1719 195 139 0 0 chrX 148721072 148721108 -17929188 + (A)n Simple_repeat Simple_repeat 1 36 0 5 1719 446 274 50 70 chrX 148721120 148721320 -17928976 - L1MC1 LINE L1 -22 6311 6116 5 1719 610 134 31 0 chrX 148721321 148721418 -17928878 + B1_Mur4 SINE Alu 3 102 -48 5 1719 2211 187 87 152 chrX 148721418 148722203 -17928093 + RLTR13D6 LTR ERVK 1 749 -153 6 1719 1208 41 0 0 chrX 148722203 148722349 -17927947 + B1_Mus2 SINE Alu 2 147 0 6 1719 2211 134 60 20 chrX 148722349 148722512 -17927784 + RLTR13D6 LTR ERVK 744 893 0 6 1719 269 218 18 0 chrX 148722512 148722556 -17927740 + B1_Mus2 SINE Alu 93 137 -10 6 1719 628 227 80 160 chrX 148722575 148722940 -17927356 - L1MC1 LINE L1 -215 6118 5780 5 1719 2601 64 108 0 chrX 148722940 148723301 -17926995 + MTB LTR MaLR 1 400 0 6 1719 1094 75 167 6 chrX 148723306 148723468 -17926828 - B2_Mm2 SINE B2 -6 189 2 6 1719 628 227 80 160 chrX 148723468 148723521 -17926775 - L1MC1 LINE L1 -554 5779 5728 5 1719 252 283 46 83 chrX 148723567 148723657 -17926639 - MT2B LTR ERVL -341 260 176 6 1719 4633 45 7 12 chrX 148723657 148724224 -17926072 + LTRIS2 LTR ERV1 1 564 0 6 1719 252 283 46 83 chrX 148724224 148724241 -17926055 - MT2B LTR ERVL -426 175 158 6 1719 482 238 155 35 chrX 148724244 148724341 -17925955 - L1MC1 LINE L1 -611 5722 5627 5 1719 729 146 27 68 chrX 148724341 148724488 -17925808 + B1_Mus2 SINE Alu 2 142 -5 6 1719 482 238 155 35 chrX 148724488 148724564 -17925732 - L1MC1 LINE L1 -707 5626 5528 5 1719 260 193 18 0 chrX 148724585 148724642 -17925654 - RMER15 LTR ERVL -104 471 414 6 1719 1155 82 0 0 chrX 148724688 148724835 -17925461 + B1_Mus1 SINE Alu 2 148 0 6 1719 713 278 43 24 chrX 148724869 148725079 -17925217 - Lx8 LINE L1 -283 7190 6977 6 1719 361 155 42 0 chrX 148725079 148725150 -17925146 + ORR1D2 LTR MaLR 1 74 -296 6 1719 966 121 6 49 chrX 148725172 148725198 -17925098 - B2_Mm2 SINE B2 -18 177 153 6 1719 405 0 0 0 chrX 148725198 148725243 -17925053 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1719 966 121 6 49 chrX 148725243 148725399 -17924897 - B2_Mm2 SINE B2 -43 152 3 6 1719 266 0 0 29 chrX 148725494 148725529 -17924767 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1719 960 111 14 0 chrX 148725529 148725665 -17924631 - B1_Mus1 SINE Alu -7 141 4 6 1719 294 226 16 0 chrX 148725665 148725727 -17924569 + RSINE1 SINE B4 73 135 -30 6 1719 216 67 0 0 chrX 148725727 148725757 -17924539 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1719 30 0 0 0 chrX 148725775 148725805 -17924491 + AT_rich Low_complexity Low_complexity 1 30 0 6 1719 1001 37 0 0 chrX 148725812 148725946 -17924350 + B1_Mus1 SINE Alu 15 148 0 6 1719 241 30 0 0 chrX 148725956 148725989 -17924307 + B3 SINE B2 1 33 -183 6 1719 1336 109 345 0 chrX 148726060 148726180 -17924116 - Lx2A1 LINE L1 -5 7003 6862 6 1719 246 62 0 0 chrX 148726180 148726212 -17924084 + (CCCA)n Simple_repeat Simple_repeat 2 33 0 6 1719 1336 109 345 0 chrX 148726212 148726366 -17923930 - Lx2A1 LINE L1 -147 6861 6635 6 1719 249 240 25 74 chrX 148726909 148726990 -17923306 + ID4 SINE ID 3 79 -4 6 1719 629 266 56 38 chrX 148727007 148727167 -17923129 + RSINE1 SINE B4 3 165 0 6 1719 433 293 9 0 chrX 148727279 148727395 -17922901 - MER2 DNA MER2_type 0 345 229 6 1719 430 195 50 66 chrX 148727407 148727528 -17922768 - B4 SINE B4 0 292 174 6 1719 274 269 0 0 chrX 148727847 148727899 -17922397 - B3A SINE B2 -66 132 81 6 1719 181 297 0 45 chrX 148728101 148728168 -17922128 + L2c LINE L2 3024 3087 -300 6 1719 1180 55 0 0 chrX 148728341 148728487 -17921809 - B1_Mus2 SINE Alu 0 147 2 6 1719 867 314 93 23 chrX 148729365 148729940 -17920356 - L2a LINE L2 0 3426 2814 6 1719 271 275 73 45 chrX 148729993 148730172 -17920124 + HAL1 LINE L1 1993 2176 -331 6 1719 330 323 106 18 chrX 148730283 148730567 -17919729 + L1MEe LINE L1 966 1274 -4862 6 1719 335 240 172 113 chrX 148730825 148731327 -17918969 + L1MEe LINE L1 1665 2216 -3950 6 1719 967 144 14 0 chrX 148731327 148731473 -17918823 - B1_Mur1 SINE Alu 0 149 2 6 1719 1408 282 119 118 chrX 148731473 148732238 -17918058 + L1MEe LINE L1 2207 2996 -3150 6 1719 334 319 11 0 chrX 148732238 148732329 -17917967 + PB1D7 SINE Alu 1 92 -28 6 1719 1408 282 119 118 chrX 148732329 148732824 -17917472 + L1MEe LINE L1 2997 3509 -2637 6 1719 841 214 22 0 chrX 148733781 148733959 -17916337 + B3 SINE B2 1 182 -34 6 1719 1100 193 43 10 chrX 148733983 148734192 -17916104 - B3 SINE B2 0 216 1 6 1719 340 270 149 63 chrX 148734259 148734607 -17915689 + L1MEe LINE L1 3874 4251 -1895 6 1719 273 178 0 19 chrX 148734607 148734661 -17915635 + L1MC3 LINE L1 6747 6852 -1190 6 1719 1847 145 144 11 chrX 148734661 148735009 -17915287 + ORR1B1 LTR MaLR 1 394 0 6 1719 262 133 0 0 chrX 148735033 148735078 -17915218 + B1_Mur4 SINE Alu 105 149 -1 6 1719 300 27 0 0 chrX 148735079 148735116 -17915180 + (A)n Simple_repeat Simple_repeat 1 37 0 6 1719 698 107 71 0 chrX 148735121 148735233 -17915063 + PB1D9 SINE Alu 1 120 0 6 1719 836 263 20 35 chrX 148735255 148735456 -17914840 + B3A SINE B2 1 198 0 6 1719 1400 256 88 33 chrX 148735465 148735977 -17914319 + L1MC3 LINE L1 6863 7396 -389 6 1719 2183 104 28 9 chrX 148735977 148736298 -17913998 + ORR1A2 LTR MaLR 1 327 0 6 1719 1400 256 88 33 chrX 148736298 148736362 -17913934 + L1MC3 LINE L1 7397 7471 -314 6 1719 4887 213 49 50 chrX 148736366 148736920 -17913376 + Lx9 LINE L1 6448 6992 -652 6 1719 1184 36 0 0 chrX 148736920 148737058 -17913238 + B1_Mus2 SINE Alu 1 138 -9 6 1719 4887 213 49 50 chrX 148737058 148737701 -17912595 + Lx9 LINE L1 6993 7644 0 6 1719 351 293 134 23 chrX 148737728 148737899 -17912397 + L1MC3 LINE L1 7687 7876 -119 6 1719 431 294 16 16 chrX 148737964 148738085 -17912211 + ID_B1 SINE B4 78 198 -26 6 1719 1167 62 0 0 chrX 148738161 148738306 -17911990 + B1_Mus2 SINE Alu 3 147 0 6 1719 592 184 82 9 chrX 148738544 148738654 -17911642 + 5S rRNA rRNA 2 119 -2 6 1719 21 0 0 0 chrX 148738658 148738679 -17911617 + AT_rich Low_complexity Low_complexity 1 21 0 6 1719 707 214 28 14 chrX 148738866 148739008 -17911288 + B1_Mur1 SINE Alu 5 148 -1 6 1719 571 274 69 63 chrX 148739169 148739505 -17910791 + MTEa LTR MaLR 6 376 -3 6 1719 554 325 98 16 chrX 148739614 148739992 -17910304 + L1ME3B LINE L1 5498 5906 -334 6 1719 1456 49 54 5 chrX 148740036 148740222 -17910074 + B2_Mm2 SINE B2 1 195 0 6 1719 1574 48 0 0 chrX 148740284 148740473 -17909823 + B2_Mm1a SINE B2 1 189 -4 6 1719 408 287 8 16 chrX 148740578 148740702 -17909594 + RMER15 LTR ERVL 299 421 -154 6 1719 1295 224 50 7 chrX 148740723 148741024 -17909272 + MTE2b LTR MaLR 4 317 -62 6 1719 1034 235 160 14 chrX 148741036 148741417 -17908879 + Lx8 LINE L1 6977 7443 -30 6 1719 937 103 50 25 chrX 148741461 148741620 -17908676 - B2_Mm2 SINE B2 -32 163 1 6 1719 366 279 0 0 chrX 148741627 148741713 -17908583 + PB1D9 SINE Alu 22 107 -13 6 1719 243 0 0 0 chrX 148741714 148741741 -17908555 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1719 1579 246 106 185 chrX 148741881 148742255 -17908041 + MTE2b-int LTR MaLR 804 1243 -337 6 1719 1236 54 0 0 chrX 148742255 148742402 -17907894 - B1_Mus2 SINE Alu 0 147 1 6 1719 1579 246 106 185 chrX 148742402 148742871 -17907425 + MTE2b-int LTR MaLR 1244 1580 0 6 1719 510 265 17 83 chrX 148742871 148743052 -17907244 + MTE2b LTR MaLR 1 169 -210 6 1719 467 162 0 0 chrX 148743088 148743168 -17907128 + MTC LTR MaLR 1 80 -341 6 1719 602 312 77 74 chrX 148743168 148743678 -17906618 + L1M3e LINE L1 284 949 -6081 6 1719 418 172 79 122 chrX 148744078 148744217 -17906079 + B1_Mus2 SINE Alu 3 135 -12 6 1719 315 0 0 0 chrX 148744218 148744253 -17906043 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1719 17513 47 4 0 chrX 148744723 148746858 -17903438 + L1_Mm LINE L1 3654 5797 -86 6 1719 1834 64 161 0 chrX 148746858 148747125 -17903171 + L1Md_A LINE L1 6268 6577 -5 6 1719 5729 81 23 8 chrX 148747125 148747913 -17902383 + L1Md_F2 LINE L1 5783 6582 0 6 1719 755 206 137 5 chrX 148748102 148748292 -17902004 + B3 SINE B2 2 216 0 6 1719 1531 68 0 5 chrX 148748755 148748948 -17901348 - B2_Mm2 SINE B2 -3 192 1 6 1719 1159 56 0 7 chrX 148748973 148749116 -17901180 - L1_Mus2 LINE L1 -131 6435 6294 6 1719 992 58 0 14 chrX 148749116 148749256 -17901040 + L1_Mus2 LINE L1 6429 6566 0 6 1719 195 42 0 0 chrX 148749259 148749283 -17901013 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1719 448 276 49 73 chrX 148749548 148749712 -17900584 - RSINE1 SINE B4 -3 162 3 6 1719 245 51 0 25 chrX 148749719 148749759 -17900537 + (TTTTTG)n Simple_repeat Simple_repeat 1 39 0 6 1719 245 269 12 93 chrX 148749793 148749879 -17900417 - ID2 SINE ID -2 81 3 6 1719 217 152 0 0 chrX 148750040 148750073 -17900223 + T-rich Low_complexity Low_complexity 1 33 0 6 1719 1131 95 0 0 chrX 148750073 148750220 -17900076 - B1_Mus2 SINE Alu 0 147 1 6 1719 731 167 16 0 chrX 148750480 148750606 -17899690 + B1_Mur4 SINE Alu 2 129 -21 6 1719 243 239 134 0 chrX 148750607 148750674 -17899622 + B3 SINE B2 77 152 -64 6 1719 285 29 0 0 chrX 148750697 148750731 -17899565 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1719 290 265 141 11 chrX 148750782 148750832 -17899464 + L1M2 LINE L1 3132 3181 -2962 6 1719 1415 65 21 16 chrX 148750832 148751020 -17899276 + B2_Mm2 SINE B2 1 189 -6 6 1719 290 265 141 11 chrX 148751020 148751160 -17899136 + L1M2 LINE L1 3182 3346 -2797 6 1719 594 176 0 0 chrX 148751161 148751263 -17899033 - B1_Mur2 SINE Alu -1 148 47 6 1719 546 283 21 0 chrX 148751292 148751437 -17898859 + B1F2 SINE Alu 1 148 -1 6 1719 748 234 52 64 chrX 148751552 148751895 -17898401 + L1MB7 LINE L1 4623 4961 -1185 6 1719 349 223 46 46 chrX 148751896 148752004 -17898292 + MLT1A1 LTR MaLR 3 110 -298 6 1719 2727 49 0 0 chrX 148752097 148752425 -17897871 - L1_Mus1 LINE L1 -408 6159 5832 6 1719 570 159 28 9 chrX 148752506 148752614 -17897682 + MLT1A1 LTR MaLR 299 408 0 6 1719 910 229 14 5 chrX 148752614 148752833 -17897463 + L1MB7 LINE L1 4957 5177 -969 6 1719 471 178 0 65 chrX 148752833 148752941 -17897355 + B1_Mus2 SINE Alu 42 142 -5 6 1719 1157 251 98 41 chrX 148752941 148753599 -17896697 + L1MB7 LINE L1 5179 5868 -316 6 1719 1174 254 10 28 chrX 148753603 148753894 -17896402 - B4 SINE B4 -6 286 1 6 1719 612 236 33 40 chrX 148753957 148754107 -17896189 - B1_Mur1 SINE Alu 0 149 1 6 1719 344 242 39 132 chrX 148754140 148754302 -17895994 + L1MB7 LINE L1 5988 6132 -52 6 1719 1416 70 5 0 chrX 148754302 148754487 -17895809 + B2_Mm1a SINE B2 2 187 -6 6 1719 344 242 39 132 chrX 148754487 148754529 -17895767 + L1MB7 LINE L1 6133 6173 -11 6 1719 233 282 84 0 chrX 148754548 148754619 -17895677 + ID4_ SINE ID 3 79 -4 6 1719 413 234 44 26 chrX 148754731 148754845 -17895451 + PB1D9 SINE Alu 2 117 -3 6 1719 228 198 45 90 chrX 148754981 148755070 -17895226 - PB1D10 SINE Alu -2 115 31 6 1719 619 284 0 30 chrX 148755578 148755745 -17894551 + RSINE1 SINE B4 2 163 -2 6 1719 335 191 0 16 chrX 148755890 148755954 -17894342 - 5S rRNA rRNA -46 75 13 6 1719 2385 157 21 9 chrX 148756169 148756606 -17893690 + RMER12 LTR ERVK 2 443 -879 6 1719 1906 61 19 0 chrX 148756625 148756887 -17893409 - MTA_Mm LTR MaLR -53 343 77 6 1719 3018 200 108 52 chrX 148756887 148757184 -17893112 + RMER12 LTR ERVK 431 778 -544 6 1719 216 97 0 0 chrX 148757184 148757215 -17893081 + (TCCA)n Simple_repeat Simple_repeat 1 31 0 7 1719 3018 200 108 52 chrX 148757215 148757761 -17892535 + RMER12 LTR ERVK 779 1321 -1 6 1719 279 0 0 0 chrX 148757764 148757795 -17892501 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 1719 277 267 99 33 chrX 148757796 148757978 -17892318 + L1MC4 LINE L1 7389 7582 -460 7 1719 815 152 22 0 chrX 148757978 148758116 -17892180 + B1_Mur2 SINE Alu 9 149 0 7 1719 427 182 50 0 chrX 148758271 148758370 -17891926 + B3A SINE B2 93 196 -2 7 1719 867 122 6 120 chrX 148758393 148758560 -17891736 + B1_Mus1 SINE Alu 1 148 0 7 1719 994 252 5 5 chrX 148758581 148758796 -17891500 + B3 SINE B2 2 216 0 7 1719 407 202 3 14 chrX 148758833 148758950 -17891346 + ID4_ SINE ID 2 115 -37 7 1719 431 318 32 53 chrX 148759093 148759282 -17891014 + MER20B DNA MER1_type 54 238 -545 7 1719 271 305 11 92 chrX 148759291 148759475 -17890821 - L2a LINE L2 0 3426 3258 7 1719 348 301 188 5 chrX 148759741 148759948 -17890348 - L2a LINE L2 -253 3173 2929 7 1719 400 305 132 21 chrX 148759960 148760241 -17890055 + MER20B DNA MER1_type 303 614 -169 7 1719 547 120 150 44 chrX 148760237 148760350 -17889946 + B1_Mm SINE Alu 23 147 0 7 1719 229 290 84 28 chrX 148760352 148760494 -17889802 + MER20B DNA MER1_type 619 768 -15 7 1719 382 220 34 114 chrX 148760687 148760836 -17889460 + MT2B LTR ERVL 142 278 -323 7 1719 815 164 0 21 chrX 148760718 148760861 -17889435 + B1_Mur4 SINE Alu 9 148 -2 7 1719 447 254 114 0 chrX 148760902 148761016 -17889280 - B1F SINE Alu -13 136 10 7 1719 219 375 65 28 chrX 148761414 148761521 -17888775 - MIR SINE MIR -61 147 37 7 1719 339 221 31 31 chrX 148762481 148762579 -17887717 - B1_Mm SINE Alu -48 99 2 7 1719 259 220 0 78 chrX 148762524 148762588 -17887708 - ID_B1 SINE B4 -88 136 78 7 1719 243 158 0 0 chrX 148762660 148762698 -17887598 + tRNA-Gly-GGA tRNA tRNA 1 38 -37 7 1719 251 268 97 106 chrX 148762872 148763072 -17887224 + Charlie4a DNA MER1_type 49 254 -254 7 1719 502 281 66 66 chrX 148763072 148763270 -17887026 + B3A SINE B2 1 198 0 7 1719 251 268 97 106 chrX 148763270 148763399 -17886897 + Charlie4a DNA MER1_type 255 375 -133 7 1719 719 92 35 14 chrX 148763501 148763644 -17886652 + RMER17B LTR ERVK 312 457 -501 7 1719 273 273 50 20 chrX 148763669 148763770 -17886526 + L2a LINE L2 3313 3416 -10 7 1719 180 0 0 0 chrX 148763822 148763842 -17886454 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 1719 1346 85 6 6 chrX 148764160 148764338 -17885958 + B2_Mm1t SINE B2 2 179 -14 7 1719 3436 93 20 31 chrX 148764663 148765171 -17885125 + Lx2 LINE L1 6495 6996 -1 7 1719 52 36 0 12 chrX 148765520 148765574 -17884722 + AT_rich Low_complexity Low_complexity 1 54 0 7 1719 1233 54 0 0 chrX 148765574 148765721 -17884575 - B1_Mus1 SINE Alu 0 148 2 7 1719 52 36 0 12 chrX 148765721 148765750 -17884546 + AT_rich Low_complexity Low_complexity 1 29 0 7 1719 455 123 0 0 chrX 148765761 148765842 -17884454 - Lx3A LINE L1 0 6981 6901 7 1719 1822 259 44 41 chrX 148765844 148766090 -17884206 + L1MC3 LINE L1 7125 7384 -401 7 1719 1547 58 16 0 chrX 148766090 148766281 -17884015 + B2_Mm2 SINE B2 2 195 0 7 1719 1822 259 44 41 chrX 148766281 148766554 -17883742 + L1MC3 LINE L1 7385 7647 -138 7 1719 1068 43 65 0 chrX 148766554 148766692 -17883604 - B1_Mus2 SINE Alu 0 147 1 7 214 1822 259 44 41 chrX 148766692 148766772 -17883524 + L1MC3 LINE L1 7648 7727 -58 7 1720 690 13 0 0 chrX 148766772 148766851 -17883445 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 7 1720 1822 259 44 41 chrX 148766851 148766880 -17883416 + L1MC3 LINE L1 7728 7755 -30 7 1720 4054 86 11 7 chrX 148766880 148767429 -17882867 + L1_Mus2 LINE L1 6013 6563 -3 7 1720 1822 259 44 41 chrX 148767429 148767456 -17882840 + L1MC3 LINE L1 7756 7783 -2 7 1720 322 256 26 0 chrX 148767675 148767753 -17882543 + B3A SINE B2 5 84 -114 7 1720 396 0 0 0 chrX 148767804 148767848 -17882448 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1720 993 215 9 32 chrX 148767858 148768079 -17882217 + B3 SINE B2 1 216 0 7 1720 22 0 0 0 chrX 148768081 148768103 -17882193 + AT_rich Low_complexity Low_complexity 1 22 0 7 1720 22 0 0 0 chrX 148768431 148768453 -17881843 + AT_rich Low_complexity Low_complexity 1 22 0 7 1720 12193 72 6 43 chrX 148768479 148769670 -17880626 + L1_Mus1 LINE L1 4160 5342 -1225 7 1720 659 95 0 0 chrX 148769670 148769765 -17880531 - BC1_Mm scRNA scRNA -57 95 1 7 1720 12193 72 6 43 chrX 148769765 148770997 -17879299 + L1_Mus1 LINE L1 5343 6567 0 7 1720 180 0 0 0 chrX 148772288 148772308 -17877988 + (GGGA)n Simple_repeat Simple_repeat 3 22 0 7 1720 303 230 0 0 chrX 148773410 148773497 -17876799 + (CAT)n Simple_repeat Simple_repeat 3 89 0 7 1720 290 294 10 0 chrX 148776266 148776368 -17873928 + CT-rich Low_complexity Low_complexity 1 103 0 7 1720 223 231 0 0 chrX 148776741 148776793 -17873503 + G-rich Low_complexity Low_complexity 6 57 0 7 1720 197 200 44 0 chrX 148777888 148777933 -17872363 + MIR SINE MIR 85 131 -77 7 1720 1019 228 142 63 chrX 148777965 148778410 -17871886 + L1ME5 LINE L1 5696 6175 -19 7 1720 387 0 0 0 chrX 148779104 148779147 -17871149 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1720 351 0 0 0 chrX 148779147 148779185 -17871111 + (GA)n Simple_repeat Simple_repeat 2 40 0 7 1720 269 272 23 62 chrX 148782718 148782848 -17867448 - ID4_ SINE ID -21 131 2 7 1720 1265 109 11 0 chrX 148782884 148783067 -17867229 + B2_Mm1t SINE B2 3 187 -6 7 1720 306 308 52 22 chrX 148783075 148783211 -17867085 - B1F1 SINE Alu -8 141 2 7 1720 295 258 75 11 chrX 148783408 148783502 -17866794 - L2a LINE L2 -5 3421 3322 7 1720 254 0 0 159 chrX 148783512 148783638 -17866658 + (CAGAG)n Simple_repeat Simple_repeat 5 110 0 7 1720 582 115 19 0 chrX 148783641 148783745 -17866551 + B1_Mus2 SINE Alu 42 147 0 7 1720 515 312 104 59 chrX 148783794 148784409 -17865887 - L2a LINE L2 -78 3348 2693 7 1720 198 319 68 8 chrX 148784407 148784524 -17865772 + L2a LINE L2 3207 3330 -96 7 1720 198 0 0 0 chrX 148785122 148785144 -17865152 + (TG)n Simple_repeat Simple_repeat 1 22 0 7 1720 273 118 0 0 chrX 148785152 148785203 -17865093 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 1720 238 310 14 40 chrX 148785332 148785480 -17864816 + GA-rich Low_complexity Low_complexity 1 144 0 7 1720 225 0 0 0 chrX 148785492 148785517 -17864779 + (CCAA)n Simple_repeat Simple_repeat 2 26 0 7 1720 1883 240 42 34 chrX 148785524 148786021 -17864275 + RCHARR1 DNA MER1_type 1 501 -473 7 1720 534 135 0 11 chrX 148786015 148786105 -17864191 + B1_Mur2 SINE Alu 52 140 -9 7 1720 217 95 0 45 chrX 148786113 148786157 -17864139 + (TAAAAA)n Simple_repeat Simple_repeat 5 46 0 7 1720 2187 157 48 35 chrX 148786162 148786353 -17863943 + RCHARR1 DNA MER1_type 488 677 -297 7 1720 1178 82 0 0 chrX 148786353 148786500 -17863796 - B1_Mus2 SINE Alu 0 147 1 7 1720 2187 157 48 35 chrX 148786500 148786789 -17863507 + RCHARR1 DNA MER1_type 678 974 0 7 1720 1017 80 58 0 chrX 148786944 148787082 -17863214 + B1_Mus2 SINE Alu 2 147 0 7 1720 255 103 0 0 chrX 148787139 148787178 -17863118 + (CAA)n Simple_repeat Simple_repeat 3 41 0 7 1720 289 353 137 24 chrX 148787524 148787653 -17862643 + MER20B DNA MER1_type 6 153 -630 7 1720 837 42 25 0 chrX 148787653 148787771 -17862525 + (GA)n Simple_repeat Simple_repeat 1 121 0 7 1720 289 353 137 24 chrX 148787771 148787969 -17862327 + MER20B DNA MER1_type 154 370 -413 7 1720 312 48 0 0 chrX 148788414 148788456 -17861840 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 1720 212 234 0 0 chrX 148789452 148789499 -17860797 + G-rich Low_complexity Low_complexity 1 47 0 7 1720 290 344 41 25 chrX 148789909 148790106 -17860190 - L1MC5 LINE L1 -53 7908 7709 7 1720 1857 175 96 5 chrX 148790290 148790674 -17859622 + MTD LTR MaLR 1 419 0 7 1720 216 263 0 66 chrX 148790819 148790880 -17859416 + ID4_ SINE ID 2 58 -25 7 1720 338 61 20 0 chrX 148790933 148790982 -17859314 + (GA)n Simple_repeat Simple_repeat 2 51 0 7 1720 456 293 27 60 chrX 148790998 148791147 -17859149 - B1F1 SINE Alu 0 149 6 7 1720 607 273 55 0 chrX 148791246 148791399 -17858897 + B3 SINE B2 3 164 -52 7 1720 345 75 0 0 chrX 148791399 148791452 -17858844 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1720 607 273 55 0 chrX 148791452 148791463 -17858833 + B3 SINE B2 165 175 -41 7 1720 348 192 0 27 chrX 148791949 148792024 -17858272 - B1_Mur1 SINE Alu 0 149 77 7 1720 689 220 28 7 chrX 148792262 148792404 -17857892 + RSINE1 SINE B4 8 152 -13 7 1720 194 0 39 0 chrX 148792477 148792503 -17857793 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1720 1089 95 0 0 chrX 148792503 148792640 -17857656 - B1_Mus2 SINE Alu -10 137 1 7 1720 682 314 15 0 chrX 148792693 148792897 -17857399 - ID_B1 SINE B4 -16 208 2 7 1720 296 290 84 88 chrX 148793155 148793416 -17856880 - B4A SINE B4 0 292 33 7 1720 1076 133 0 6 chrX 148793418 148793599 -17856697 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 7 1720 546 186 10 0 chrX 148793962 148794064 -17856232 + B1_Mur1 SINE Alu 18 120 -29 7 1720 597 235 73 0 chrX 148794150 148794286 -17856010 - B1_Mus2 SINE Alu -1 146 1 7 1720 304 171 206 2 chrX 148794286 148794365 -17855931 + B1F SINE Alu 53 144 -5 7 1720 441 129 0 0 chrX 148794367 148794437 -17855859 + (GGGA)n Simple_repeat Simple_repeat 3 72 0 7 1720 477 0 0 0 chrX 148794734 148794787 -17855509 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1720 679 86 4 5 chrX 148795086 148795196 -17855100 + B1_Mus1 SINE Alu 1 109 -11 7 1720 568 310 45 6 chrX 148795288 148795444 -17854852 - RSINE1 SINE B4 -2 163 2 7 1720 582 278 46 6 chrX 148796335 148796509 -17853787 - MIR SINE MIR -20 242 62 7 1720 237 108 0 0 chrX 148796599 148796636 -17853660 + (TA)n Simple_repeat Simple_repeat 2 38 0 7 1720 209 264 28 0 chrX 148797098 148797170 -17853126 + (CA)n Simple_repeat Simple_repeat 1 74 0 7 1720 225 83 0 0 chrX 148797577 148797613 -17852683 + (TC)n Simple_repeat Simple_repeat 1 36 0 7 1720 338 0 24 0 chrX 148797622 148797664 -17852632 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 1720 225 0 0 0 chrX 148798336 148798361 -17851935 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 1720 525 131 0 0 chrX 148798930 148799014 -17851282 + (CA)n Simple_repeat Simple_repeat 1 84 0 7 1720 192 143 0 0 chrX 148800380 148800422 -17849874 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1720 606 14 0 0 chrX 148800692 148800763 -17849533 + (CA)n Simple_repeat Simple_repeat 1 71 0 7 1720 432 0 0 0 chrX 148801225 148801273 -17849023 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 1720 231 343 52 15 chrX 148801561 148801697 -17848599 - MIRb SINE MIR -58 210 70 8 1720 230 98 0 47 chrX 148803582 148803625 -17846671 + (GGGA)n Simple_repeat Simple_repeat 2 42 0 8 1720 400 296 179 30 chrX 148804659 148804796 -17845500 + L1M5 LINE L1 2884 3027 -3119 8 1720 351 0 0 0 chrX 148804796 148804835 -17845461 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1720 400 296 179 30 chrX 148804835 148805255 -17845041 + L1M5 LINE L1 3028 3523 -2623 8 1720 721 348 8 27 chrX 148805262 148805519 -17844777 + B4A SINE B4 41 292 0 8 1720 556 236 151 33 chrX 148805611 148805781 -17844515 + L1M5 LINE L1 3866 4062 -2084 8 1720 1466 236 139 0 chrX 148805781 148806149 -17844147 + MTD LTR MaLR 1 419 0 8 1720 556 236 151 33 chrX 148806149 148806250 -17844046 + L1M5 LINE L1 4063 4169 -1977 8 1720 750 201 227 60 chrX 148806259 148806323 -17843973 + B3 SINE B2 1 64 -152 8 1720 1344 76 21 21 chrX 148806323 148806511 -17843785 - B2_Mm2 SINE B2 -7 188 1 8 1720 750 201 227 60 chrX 148806511 148806631 -17843665 + B3 SINE B2 65 216 0 8 1720 2184 233 86 12 chrX 148806647 148807147 -17843149 + Lx8 LINE L1 6256 6792 -681 8 1720 591 53 0 0 chrX 148807147 148807222 -17843074 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 8 1720 1167 51 0 0 chrX 148807222 148807359 -17842937 - B1_Mus2 SINE Alu -10 137 1 8 1720 259 255 28 64 chrX 148807713 148807822 -17842474 - Lx8 LINE L1 -1 7472 7368 8 1720 829 275 21 158 chrX 148807840 148808049 -17842247 + ORR1D2 LTR MaLR 3 172 -202 8 1720 999 110 0 0 chrX 148808049 148808194 -17842102 - B1_Mus1 SINE Alu -2 146 2 8 1720 880 240 5 24 chrX 148808194 148808407 -17841889 + ORR1D2 LTR MaLR 155 363 -7 8 1720 26 30 0 0 chrX 148808414 148808447 -17841849 + AT_rich Low_complexity Low_complexity 1 33 0 8 1720 2238 231 64 56 chrX 148808448 148809038 -17841258 - Lx8 LINE L1 -173 7300 6706 8 1720 1250 286 102 38 chrX 148809044 148809603 -17840693 - Lx8 LINE L1 0 7473 6879 8 1720 1263 252 120 62 chrX 148809613 148810125 -17840171 - RMER17B LTR ERVK -11 947 432 8 1720 513 0 0 0 chrX 148810125 148810182 -17840114 + (GA)n Simple_repeat Simple_repeat 2 58 0 8 1720 1263 252 120 62 chrX 148810182 148810346 -17839950 - RMER17B LTR ERVK -527 431 234 8 1720 1130 206 0 72 chrX 148810355 148810590 -17839706 - Lx8 LINE L1 -958 6515 6298 8 1720 5333 40 0 0 chrX 148810622 148811247 -17839049 - L1Md_T LINE L1 0 6582 5958 8 1720 12204 192 26 165 chrX 148811526 148814988 -17835308 - Lx7 LINE L1 -361 7335 3828 8 1720 3145 98 2 14 chrX 148814988 148815434 -17834862 - BGLII_B LTR ERVK 0 441 1 8 1720 12204 166 26 267 chrX 148815434 148815829 -17834467 - Lx7 LINE L1 -2053 3827 3791 8 1720 645 38 0 0 chrX 148815829 148815909 -17834387 + (CA)n Simple_repeat Simple_repeat 2 81 0 8 1720 12204 166 26 267 chrX 148815909 148816814 -17833482 - L1_Mur3 LINE L1 -2090 3790 3790 8 1720 820 50 207 0 chrX 148816814 148816935 -17833361 - B1_Mus1 SINE Alu -1 147 2 8 1720 12204 166 26 267 chrX 148816935 148818715 -17831581 - Lx7 LINE L1 -2090 3790 2069 8 1720 219 69 0 0 chrX 148818715 148818744 -17831552 + (TG)n Simple_repeat Simple_repeat 1 29 0 8 1720 12204 166 26 267 chrX 148818744 148818829 -17831467 - Lx7 LINE L1 -3812 2068 1947 8 1720 1272 202 94 2 chrX 148818827 148819226 -17831070 - Lx7 LINE L1 -6448 1280 888 8 1720 1238 254 40 57 chrX 148819591 148820190 -17830106 - L1_Mur3 LINE L1 -4451 1429 828 8 1720 1126 62 7 20 chrX 148820657 148820805 -17829491 - B1_Mus2 SINE Alu 0 147 2 8 1720 1504 63 16 0 chrX 148820809 148820998 -17829298 - B2_Mm2 SINE B2 -1 194 3 8 1720 292 157 24 0 chrX 148821014 148821097 -17829199 - Lx4A LINE L1 -7 7051 6967 8 1720 1534 111 32 56 chrX 148821095 148821344 -17828952 + Lx4A LINE L1 6714 6956 -102 8 1720 461 62 31 0 chrX 148821336 148821400 -17828896 + Lx4A LINE L1 6633 6698 -360 8 1720 305 192 77 0 chrX 148821405 148821509 -17828787 - Lx9 LINE L1 0 7644 7533 8 1720 441 0 0 0 chrX 148821517 148821566 -17828730 + (TC)n Simple_repeat Simple_repeat 2 50 0 8 1720 360 169 42 0 chrX 148821573 148821644 -17828652 - Lx9 LINE L1 -190 7454 7381 8 1720 1593 251 73 30 chrX 148821933 148822674 -17827622 + RMER1A Other Other 1 536 -530 8 1720 2497 208 137 155 chrX 148822689 148823735 -17826561 + RMER1A Other Other 1 1027 -3 8 1720 281 294 0 14 chrX 148824106 148824186 -17826110 - L1M5 LINE L1 -2020 4126 4048 8 1720 634 277 20 32 chrX 148824458 148824704 -17825592 + L1_Mur3 LINE L1 5194 5436 -444 8 1720 380 263 70 6 chrX 148824683 148824840 -17825456 - L1M5 LINE L1 -2066 4080 3914 8 1720 636 135 0 0 chrX 148824844 148824940 -17825356 - B1_Mur3 SINE Alu 0 149 54 8 1720 996 106 0 0 chrX 148824988 148825167 -17825129 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 8 1720 384 111 0 0 chrX 148825168 148825240 -17825056 + (TATG)n Simple_repeat Simple_repeat 3 74 0 8 1720 1158 64 0 0 chrX 148825240 148825475 -17824821 + (TCTA)n Simple_repeat Simple_repeat 1 235 0 8 1720 902 157 0 0 chrX 148825476 148825616 -17824680 - B1_Mur4 SINE Alu -9 141 2 8 1720 417 109 0 0 chrX 148825629 148825693 -17824603 + (TTA)n Simple_repeat Simple_repeat 2 65 0 8 1720 319 266 208 39 chrX 148825707 148825881 -17824415 - L1M5 LINE L1 -2393 3753 3579 8 1720 1442 74 16 0 chrX 148825881 148826070 -17824226 - B2_Mm1t SINE B2 0 193 2 8 1720 319 266 208 39 chrX 148826070 148826251 -17824045 - L1M5 LINE L1 -2568 3578 3338 8 1720 1127 72 60 11 chrX 148826256 148826438 -17823858 - Lx3_Mus LINE L1 -10 6999 6809 8 1720 423 0 0 0 chrX 148826507 148826554 -17823742 + (TC)n Simple_repeat Simple_repeat 1 47 0 8 1720 23 33 0 0 chrX 148826743 148826773 -17823523 + AT_rich Low_complexity Low_complexity 1 30 0 8 1720 443 247 52 0 chrX 148826799 148826896 -17823400 - B1F SINE Alu -32 117 16 8 1720 509 276 132 27 chrX 148826904 148827236 -17823060 - L1MC LINE L1 -3060 3086 2720 8 1720 919 221 72 86 chrX 148827238 148827530 -17822766 + RMER1B Other Other 273 560 -506 8 1720 492 128 0 0 chrX 148827629 148827707 -17822589 + (TATG)n Simple_repeat Simple_repeat 3 80 0 8 1720 4397 195 65 37 chrX 148827707 148828701 -17821595 - RMER1B Other Other -12 1054 33 8 1720 334 244 120 38 chrX 148828753 148828911 -17821385 - L1M5 LINE L1 -3533 2613 2443 8 1720 273 299 17 17 chrX 148829141 148829260 -17821036 - L1MA4A LINE L1 -373 5930 5812 8 1720 6422 62 0 2 chrX 148829348 148830143 -17820153 - L1Md_F2 LINE L1 -10 6572 5780 8 1720 778 159 14 21 chrX 148830146 148830287 -17820009 - B1_Mur2 SINE Alu 0 149 10 8 1720 753 149 7 21 chrX 148830313 148830457 -17819839 + ORR1D1 LTR MaLR 1 142 -232 8 1720 5167 25 3 5 chrX 148830465 148831064 -17819232 - L1Md_F2 LINE L1 0 6582 5985 8 1720 2261 62 0 3 chrX 148831064 148831365 -17818931 - L1VL1 LINE L1 -5349 1073 774 8 1720 707 219 68 16 chrX 148831365 148831555 -17818741 + ORR1D1 LTR MaLR 153 352 -32 8 1720 432 130 0 0 chrX 148832191 148832260 -17818036 + (TA)n Simple_repeat Simple_repeat 2 70 0 8 1720 767 204 7 0 chrX 148832305 148832442 -17817854 + B1_Mur4 SINE Alu 4 141 -9 8 1720 284 107 18 0 chrX 148832748 148832766 -17817530 + (TTTC)n Simple_repeat Simple_repeat 1 18 0 8 1720 504 0 0 0 chrX 148832766 148832822 -17817474 + (TCCC)n Simple_repeat Simple_repeat 4 59 0 8 1720 284 107 18 0 chrX 148832822 148832859 -17817437 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 8 1720 244 356 63 63 chrX 148832921 148833032 -17817264 + RSINE1 SINE B4 51 161 -4 8 1720 438 20 0 0 chrX 148833036 148833087 -17817209 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1720 1252 192 115 63 chrX 148833812 148834195 -17816101 + Lx7 LINE L1 7102 7504 -192 8 1720 1083 77 0 0 chrX 148834196 148834364 -17815932 + (GA)n Simple_repeat Simple_repeat 1 168 0 8 1720 399 176 62 7 chrX 148834364 148834473 -17815823 + Lx7 LINE L1 7610 7692 -4 8 1720 446 223 211 16 chrX 148834862 148834985 -17815311 + RSINE1 SINE B4 3 149 -16 8 1720 262 200 0 0 chrX 148834995 148835055 -17815241 + (CA)n Simple_repeat Simple_repeat 1 60 0 8 1720 4603 63 8 15 chrX 148835809 148836416 -17813880 + L1Md_F2 LINE L1 5978 6580 -2 8 1720 829 219 94 35 chrX 148836421 148836624 -17813672 - B3 SINE B2 -1 215 1 8 1720 1205 48 0 0 chrX 148836679 148836826 -17813470 - L1_Mus3 LINE L1 -452 6186 6040 8 1720 1628 94 37 4 chrX 148836826 148837071 -17813225 + L1_Mus3 LINE L1 6386 6638 0 8 1720 207 0 0 0 chrX 148837297 148837320 -17812976 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 1720 843 36 0 0 chrX 148837333 148837443 -17812853 - B1_Mm SINE Alu -37 110 1 8 1720 248 299 26 0 chrX 148838382 148838459 -17811837 - B1F1 SINE Alu -70 79 1 8 1720 309 309 0 0 chrX 148838556 148838624 -17811672 - ID4 SINE ID -15 68 1 8 1720 2282 121 0 3 chrX 148839018 148839349 -17810947 - Lx3B LINE L1 0 6973 6644 8 1720 931 272 43 28 chrX 148839439 148839692 -17810604 - B4A SINE B4 -31 261 5 8 1720 1343 196 167 22 chrX 148839777 148840143 -17810153 - MTD LTR MaLR 0 419 1 8 1720 14283 79 25 7 chrX 148840573 148842448 -17807848 - L1VL2 LINE L1 -601 3014 1095 8 1720 1689 21 0 0 chrX 148842448 148842634 -17807662 - B2_Mm1a SINE B2 -7 186 1 8 1720 14283 114 35 2 chrX 148842634 148843645 -17806651 - L1VL2 LINE L1 -2521 1094 56 8 1720 1975 158 24 86 chrX 148844390 148844799 -17805497 + ORR1C2 LTR MaLR 1 384 0 8 1720 451 232 105 7 chrX 148844850 148844993 -17805303 - RCHARR1 DNA MER1_type 0 974 818 8 1720 1123 252 111 6 chrX 148845455 148845798 -17804498 - RLTR18B LTR ERVK -1 511 133 8 1720 701 235 65 16 chrX 148845814 148846000 -17804296 - RLTR18B LTR ERVK -310 202 8 8 1720 442 152 0 0 chrX 148846147 148846226 -17804070 - RCHARR1 DNA MER1_type -150 824 746 8 1720 1571 261 102 28 chrX 148846981 148847631 -17802665 - RCHARR1 DNA MER1_type -229 745 48 8 1720 1189 278 113 55 chrX 148847914 148848550 -17801746 - Lx8 LINE L1 -3 7470 6798 8 1720 4730 135 22 0 chrX 148849001 148849720 -17800576 - RMER19A LTR ERVK 0 737 3 8 1720 226 242 0 57 chrX 148850155 148850225 -17800071 - ID4 SINE ID -10 73 8 8 1720 247 250 0 0 chrX 148850487 148850543 -17799753 + ID4_ SINE ID 17 72 -11 8 1720 450 333 16 5 chrX 148850493 148850686 -17799610 + ID_B1 SINE B4 24 218 -6 8 1720 1231 268 49 40 chrX 148850888 148851416 -17798880 + RMER5 LTR ERV1 1 533 -1 8 1720 240 286 13 0 chrX 148851527 148851604 -17798692 + MER92C LTR ERV1 311 388 -166 8 1720 327 105 0 0 chrX 148853624 148853681 -17796615 + (GA)n Simple_repeat Simple_repeat 2 58 0 8 1720 525 32 0 0 chrX 148853843 148853906 -17796390 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 8 1720 41 21 0 0 chrX 148854888 148854936 -17795360 + AT_rich Low_complexity Low_complexity 1 48 0 8 1720 2659 75 0 42 chrX 148855119 148855480 -17794816 - ORR1A1 LTR MaLR 0 346 1 8 1720 2097 161 19 104 chrX 148855881 148856312 -17793984 - ORR1B1 LTR MaLR 0 394 1 8 1720 405 264 38 23 chrX 148857117 148857249 -17793047 - B4A SINE B4 -139 153 20 8 1720 1331 161 133 65 chrX 148857273 148857657 -17792639 - RMER19C LTR ERVK 0 410 1 9 1720 2138 142 176 11 chrX 148857657 148858264 -17792032 - RMER17C-int LTR ERVK 0 3238 2532 9 1720 781 146 184 0 chrX 148858252 148858410 -17791886 - RMER17C-int LTR ERVK -879 2359 2173 9 1720 957 198 187 41 chrX 148858416 148858850 -17791446 - RMER17C-int LTR ERVK -1233 2005 1508 9 1720 1066 175 153 71 chrX 148859709 148860017 -17790279 - RMER17C-int LTR ERVK -2905 333 1 9 1720 2312 158 156 17 chrX 148860337 148860864 -17789432 - RMER19C LTR ERVK 0 611 12 9 1720 534 197 20 93 chrX 148860991 148861060 -17789236 - B1_Mur2 SINE Alu -1 148 88 9 1720 3318 25 10 5 chrX 148861060 148861454 -17788842 - MTA_Mm LTR MaLR 0 396 1 9 1720 534 197 20 93 chrX 148861454 148861535 -17788761 - B1_Mur2 SINE Alu -62 87 9 9 1720 695 172 0 0 chrX 148861589 148861717 -17788579 - ORR1C1 LTR MaLR 0 367 240 9 1720 476 110 75 32 chrX 148861746 148861840 -17788456 - ORR1C1 LTR MaLR -275 103 6 9 1720 4253 240 68 37 chrX 148861845 148863169 -17787127 - ORR1C1-int LTR MaLR 0 1370 6 9 1720 1987 140 52 70 chrX 148863174 148863559 -17786737 - ORR1C1 LTR MaLR 0 378 1 9 1720 6940 90 3 1 chrX 148863654 148864580 -17785716 + L1_Mus4 LINE L1 5708 6635 -1 9 1720 679 211 14 7 chrX 148864841 148864989 -17785307 - B1_Mur4 SINE Alu -1 149 1 9 1720 261 343 19 9 chrX 148865142 148865248 -17785048 + MYSERV-int LTR ERVK 2086 2192 -4358 9 1720 459 0 0 0 chrX 148865622 148865673 -17784623 + (CA)n Simple_repeat Simple_repeat 1 51 0 9 1720 216 98 36 89 chrX 148866332 148866388 -17783908 + T-rich Low_complexity Low_complexity 3 55 0 9 1720 333 0 0 0 chrX 148866581 148866618 -17783678 + (TC)n Simple_repeat Simple_repeat 2 38 0 9 1720 1121 84 7 0 chrX 148866694 148866837 -17783459 + B1_Mus2 SINE Alu 1 144 -3 9 1720 615 27 0 0 chrX 148866837 148866910 -17783386 + (GA)n Simple_repeat Simple_repeat 2 74 0 9 1720 210 98 24 24 chrX 148868562 148868604 -17781692 + (TTTTG)n Simple_repeat Simple_repeat 1 42 0 9 1720 2390 138 51 0 chrX 148870900 148871271 -17779025 + ORR1B1 LTR MaLR 3 392 -2 9 1720 674 235 74 27 chrX 148872645 148872847 -17777449 + Lx5 LINE L1 6537 6692 -358 9 1720 437 192 28 19 chrX 148872850 148872956 -17777340 + MTE2a LTR MaLR 272 378 -1 9 1720 905 280 77 29 chrX 148872957 148873372 -17776924 + L1MA6 LINE L1 4024 4458 -1685 9 1720 39031 10 0 1 chrX 148873381 148879377 -17770919 + L1Md_T LINE L1 1 5586 -297 9 1720 9035 10 0 0 chrX 148879377 148880373 -17769923 + L1Md_T LINE L1 5587 6582 0 9 1720 6653 6 0 0 chrX 148880381 148881111 -17769185 + L1Md_A LINE L1 4857 5586 -297 9 1720 9205 3 0 0 chrX 148881111 148882107 -17768189 + L1Md_A LINE L1 5587 6582 0 9 1720 1323 316 62 39 chrX 148882163 148883544 -17766752 + L1MA6 LINE L1 4468 5935 -365 9 1720 22 56 0 0 chrX 148883841 148883877 -17766419 + AT_rich Low_complexity Low_complexity 1 36 0 9 1720 362 192 0 2 chrX 148883989 148884072 -17766224 + L1MB8 LINE L1 3664 3768 -2378 9 1720 274 331 35 35 chrX 148884099 148884240 -17766056 - B1F1 SINE Alu -5 144 4 9 1720 322 241 122 14 chrX 148884258 148884383 -17765913 + L1MB8 LINE L1 3795 3921 -2225 9 1720 375 230 50 66 chrX 148884495 148884616 -17765680 + PB1D9 SINE Alu 2 120 0 9 1720 266 280 56 9 chrX 148884621 148884729 -17765567 + L1MB8 LINE L1 3959 4071 -2075 9 1720 239 329 12 35 chrX 148884896 148884981 -17765315 + ID4_ SINE ID 1 83 0 9 1720 228 210 12 24 chrX 148884981 148885064 -17765232 + GA-rich Low_complexity Low_complexity 1 82 0 9 1720 1227 72 0 16 chrX 148885065 148885248 -17765048 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 9 1720 1329 100 5 5 chrX 148885270 148885461 -17764835 + B2_Mm2 SINE B2 1 191 -4 9 1720 252 309 82 54 chrX 148885511 148885658 -17764638 - RMER15 LTR ERVL 0 575 425 9 1720 249 310 0 0 chrX 148885822 148885893 -17764403 - Lx8 LINE L1 -344 7129 7059 9 1720 412 275 48 29 chrX 148886099 148886305 -17763991 + L1MB8 LINE L1 5660 5869 -309 9 1720 587 312 12 6 chrX 148886327 148886488 -17763808 - RSINE1 SINE B4 0 165 4 9 1720 470 265 62 76 chrX 148886501 148886791 -17763505 + L1MB8 LINE L1 5893 6178 0 9 1720 913 261 149 32 chrX 148887530 148887626 -17762670 + MTC LTR MaLR 1 97 -324 9 1720 786 167 256 0 chrX 148887626 148887806 -17762490 - URR1A DNA MER1_type 0 226 1 9 1720 913 261 149 32 chrX 148887806 148888057 -17762239 + MTC LTR MaLR 98 389 -32 9 1720 2147 85 3 7 chrX 148888071 148888380 -17761916 - L1_Mus4 LINE L1 0 6636 6329 9 1720 1153 21 0 14 chrX 148888709 148888795 -17761501 + (TTC)n Simple_repeat Simple_repeat 1 85 0 9 1720 1098 100 0 16 chrX 148888795 148888978 -17761318 + (TCC)n Simple_repeat Simple_repeat 1 180 0 9 1720 1153 21 0 14 chrX 148888978 148889039 -17761257 + (TTC)n Simple_repeat Simple_repeat 1 60 0 9 1720 195 42 0 0 chrX 148889046 148889070 -17761226 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 9 1720 371 88 0 22 chrX 148889086 148889152 -17761144 - B2_Mm2 SINE B2 -107 109 47 9 1720 1269 69 46 0 chrX 148889180 148889353 -17760943 - B2_Mm2 SINE B2 -14 181 1 9 1720 1871 48 0 0 chrX 148890039 148890267 -17760029 + L1Md_F2 LINE L1 6355 6582 0 9 1720 15484 108 22 1 chrX 148890832 148893844 -17756452 - L1Md_F LINE L1 -2434 3449 371 9 1720 14003 78 13 5 chrX 148893834 148896409 -17753887 - L1VL4 LINE L1 -755 2804 210 9 1720 3548 192 100 55 chrX 148896439 148896961 -17753335 + RLTR42-int LTR ERVK 4021 4565 -957 9 1720 3236 46 147 0 chrX 148896961 148897375 -17752921 + MT2C_Mm LTR ERVL 1 475 0 9 1720 3548 192 100 55 chrX 148897375 148897393 -17752903 + RLTR42-int LTR ERVK 4566 4576 -946 9 1720 1107 201 245 76 chrX 148897393 148897427 -17752869 - MT2B LTR ERVL -4 597 562 9 1720 459 35 0 0 chrX 148897427 148897484 -17752812 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 9 26 1107 201 245 76 chrX 148897484 148897960 -17752336 - MT2B LTR ERVL -40 561 1 9 1721 3548 192 100 55 chrX 148897960 148898312 -17751984 + RLTR42-int LTR ERVK 4577 4954 -568 9 1721 256 320 61 51 chrX 148898376 148898422 -17751874 + RLTR4_MM-int LTR ERV1 7097 7201 -400 9 1721 368 320 8 0 chrX 148898422 148898544 -17751752 + MERVK26-int LTR ERVK 6494 6616 -303 9 1721 256 320 61 51 chrX 148898544 148898590 -17751706 + RLTR4_MM-int LTR ERV1 7202 7312 -289 9 1721 3319 260 31 18 chrX 148899127 148899986 -17750310 + RMER1C Other Other 221 1228 -114 9 1721 35110 74 15 17 chrX 148900029 148906048 -17744248 - L1Md_F2 LINE L1 0 6582 575 9 1721 527 179 123 0 chrX 148906059 148906165 -17744131 + RMER1C Other Other 1219 1337 -5 9 1721 8404 84 37 28 chrX 148906165 148907397 -17742899 + Lx3_Mus LINE L1 5766 7008 -1 9 1721 228 35 0 0 chrX 148907491 148907520 -17742776 + (CA)n Simple_repeat Simple_repeat 2 30 0 9 1721 1558 287 89 17 chrX 148907565 148908354 -17741942 - Lx9 LINE L1 -160 7484 6476 9 1721 216 297 0 52 chrX 148908573 148908669 -17741627 + T-rich Low_complexity Low_complexity 1 91 0 9 1721 22 0 0 0 chrX 148909091 148909113 -17741183 + AT_rich Low_complexity Low_complexity 1 22 0 9 1721 643 200 259 0 chrX 148909709 148909879 -17740417 + B3 SINE B2 1 214 -2 9 1721 24 0 0 0 chrX 148909880 148909904 -17740392 + AT_rich Low_complexity Low_complexity 1 24 0 9 1721 446 305 70 23 chrX 148910539 148910838 -17739458 + L1M2 LINE L1 2285 2597 -4252 9 1721 225 294 65 0 chrX 148911112 148911204 -17739092 - L1M2c LINE L1 -4585 2204 2107 9 1721 261 0 0 0 chrX 148911250 148911279 -17739017 + (TTG)n Simple_repeat Simple_repeat 2 30 0 9 1721 600 238 168 6 chrX 148911352 148911492 -17738804 + B3 SINE B2 14 182 -34 9 1721 459 0 0 0 chrX 148911492 148911543 -17738753 + (CATA)n Simple_repeat Simple_repeat 4 54 0 9 1721 600 238 168 6 chrX 148911543 148911575 -17738721 + B3 SINE B2 183 214 -2 9 1721 270 292 0 0 chrX 148911584 148911649 -17738647 + B4 SINE B4 83 147 -145 9 1721 261 236 18 0 chrX 148911601 148911656 -17738640 + B1_Mus1 SINE Alu 16 71 -77 9 1721 351 0 0 0 chrX 148911719 148911758 -17738538 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 1721 30634 85 12 21 chrX 148911805 148914077 -17736219 - L1_Mus1 LINE L1 0 6567 4281 9 1721 1661 22 0 0 chrX 148914077 148914260 -17736036 - B2_Mm1a SINE B2 -10 183 1 9 1721 30634 108 8 36 chrX 148914260 148914815 -17735481 - L1_Mus1 LINE L1 -1603 4280 3759 9 1721 1107 82 7 0 chrX 148914815 148914961 -17735335 - B1_Mus2 SINE Alu 0 147 1 9 1721 30634 118 23 30 chrX 148914961 148918378 -17731918 - L1_Mus1 LINE L1 -2125 3758 387 9 1721 784 242 9 28 chrX 148918381 148918598 -17731698 - B3 SINE B2 -3 213 1 9 1721 505 297 112 27 chrX 148918620 148919032 -17731264 + L1M2 LINE L1 2846 3305 -3540 9 1721 919 292 118 7 chrX 148919092 148919388 -17730908 - MTE2b LTR MaLR -50 329 1 9 1721 1330 245 37 9 chrX 148919442 148919792 -17730504 - ORR1D2 LTR MaLR -10 360 1 9 1721 522 309 49 0 chrX 148920062 148920224 -17730072 + MTE2a LTR MaLR 85 254 -125 9 1721 1210 270 108 50 chrX 148920305 148920785 -17729511 - Lx5 LINE L1 -6 7044 6537 9 1721 2390 138 51 0 chrX 148922151 148922522 -17727774 - ORR1B1 LTR MaLR -2 392 3 9 1721 210 98 24 24 chrX 148924818 148924860 -17725436 + (CAAAA)n Simple_repeat Simple_repeat 1 42 0 9 1721 510 17 0 0 chrX 148926512 148926571 -17723725 + (TC)n Simple_repeat Simple_repeat 2 60 0 9 1721 1121 84 7 0 chrX 148926571 148926714 -17723582 - B1_Mus2 SINE Alu -3 144 1 9 1721 333 0 0 0 chrX 148926790 148926827 -17723469 + (GA)n Simple_repeat Simple_repeat 2 38 0 9 1721 216 98 36 89 chrX 148927020 148927076 -17723220 + A-rich Low_complexity Low_complexity 3 55 0 9 1721 423 0 0 0 chrX 148927735 148927782 -17722514 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 1721 261 343 19 9 chrX 148928157 148928263 -17722033 - MYSERV-int LTR ERVK -4358 2192 2086 9 1721 679 211 14 7 chrX 148928416 148928564 -17721732 + B1_Mur4 SINE Alu 1 149 -1 9 1721 6986 84 4 1 chrX 148928825 148929750 -17720546 - L1_Mus4 LINE L1 -1 6635 5708 9 1721 1978 129 57 75 chrX 148929845 148930230 -17720066 + ORR1C1 LTR MaLR 1 378 0 9 1721 4414 236 67 34 chrX 148930235 148931556 -17718740 + ORR1C1-int LTR MaLR 6 1370 0 9 1721 509 88 75 32 chrX 148931561 148931655 -17718641 + ORR1C1 LTR MaLR 6 103 -275 9 1721 717 164 0 0 chrX 148931684 148931812 -17718484 + ORR1C1 LTR MaLR 240 367 0 9 1721 534 197 20 93 chrX 148931866 148931947 -17718349 + B1_Mur2 SINE Alu 9 87 -62 9 1721 3218 48 5 5 chrX 148931947 148932343 -17717953 + MTA_Mm LTR MaLR 1 396 0 9 1721 534 197 20 93 chrX 148932343 148932412 -17717884 + B1_Mur2 SINE Alu 88 148 -1 9 1721 2312 158 156 17 chrX 148932541 148933068 -17717228 + RMER19C LTR ERVK 12 611 0 9 1721 1066 175 153 71 chrX 148933388 148933696 -17716600 + RMER17C-int LTR ERVK 1 333 -2905 9 1721 675 173 97 55 chrX 148934555 148934720 -17715576 + RMER17C-int LTR ERVK 1508 1679 -1559 9 1721 956 195 96 36 chrX 148934739 148934989 -17715307 + RMER17C-int LTR ERVK 1741 2005 -1233 9 1721 766 152 184 0 chrX 148934995 148935153 -17715143 + RMER17C-int LTR ERVK 2173 2359 -879 9 1721 2138 142 176 11 chrX 148935141 148935748 -17714548 + RMER17C-int LTR ERVK 2532 3238 0 9 1721 1310 164 133 65 chrX 148935748 148936132 -17714164 + RMER19C LTR ERVK 1 410 0 9 1721 405 264 38 23 chrX 148936156 148936288 -17714008 + B4A SINE B4 20 153 -139 9 1721 2097 161 19 104 chrX 148937093 148937524 -17712772 + ORR1B1 LTR MaLR 1 394 0 9 1721 2659 75 0 42 chrX 148937925 148938286 -17712010 + ORR1A1 LTR MaLR 1 346 0 9 1721 41 21 0 0 chrX 148938469 148938517 -17711779 + AT_rich Low_complexity Low_complexity 1 48 0 9 1721 525 32 0 0 chrX 148939499 148939562 -17710734 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 9 1721 327 105 0 0 chrX 148939724 148939781 -17710515 + (TC)n Simple_repeat Simple_repeat 2 58 0 9 1721 240 286 13 0 chrX 148941801 148941878 -17708418 - MER92C LTR ERV1 -166 388 311 9 1721 1231 268 49 40 chrX 148941989 148942517 -17707779 - RMER5 LTR ERV1 -1 533 1 9 1721 477 316 31 16 chrX 148942719 148942912 -17707384 - ID_B1 SINE B4 -5 219 24 9 1721 240 227 0 57 chrX 148943180 148943250 -17707046 + ID4 SINE ID 8 73 -10 9 1721 4670 132 22 0 chrX 148943685 148944404 -17705892 + RMER19A LTR ERVK 3 737 0 9 1721 998 278 72 24 chrX 148944855 148945272 -17705024 + Lx8 LINE L1 6798 7234 -239 9 1721 1797 257 105 31 chrX 148945777 148946427 -17703869 + RCHARR1 DNA MER1_type 48 745 -229 9 1721 324 0 0 0 chrX 148946852 148946888 -17703408 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1721 449 177 0 0 chrX 148947202 148947281 -17703015 + RCHARR1 DNA MER1_type 746 824 -150 9 1721 1299 265 118 25 chrX 148947428 148947979 -17702317 + RLTR18B LTR ERVK 8 613 -3 1 1721 479 220 112 14 chrX 148948442 148948585 -17701711 + RCHARR1 DNA MER1_type 818 974 0 9 1721 1936 158 25 83 chrX 148948636 148949044 -17701252 - ORR1C2 LTR MaLR 0 384 1 1 1721 638 267 58 49 chrX 148949264 148949538 -17700758 - RLTR18B LTR ERVK -112 400 144 1 1721 421 286 89 131 chrX 148949523 148949837 -17700459 - RLTR18B LTR ERVK -312 304 4 1 1721 7628 179 30 36 chrX 148949839 148952254 -17698042 + Lx6 LINE L1 4054 6280 -1180 1 1721 2552 49 64 3 chrX 148952255 148952581 -17697715 - ORR1A1 LTR MaLR 0 346 1 1 1721 13491 57 22 2 chrX 148952613 148954369 -17695927 - ORR1A1-int LTR MaLR 0 1792 1 1 1721 1454 85 15 0 chrX 148954369 148954570 -17695726 - MT2C_Mm LTR ERVL 0 475 272 1 1721 1148 91 140 0 chrX 148954523 148954709 -17695587 - ORR1A1 LTR MaLR -134 212 1 1 1721 1305 113 53 19 chrX 148954709 148954917 -17695379 + Lx6 LINE L1 6277 6491 -969 1 1721 4472 108 38 13 chrX 148954925 148955641 -17694655 - RLTR21 LTR ERVK -442 1130 397 1 1721 375 348 28 35 chrX 148955962 148956105 -17694191 + B1F SINE Alu 1 142 -7 1 1721 526 228 24 31 chrX 148956128 148956255 -17694041 + B1F SINE Alu 23 148 -1 1 1721 404 273 137 0 chrX 148956314 148956475 -17693821 + L1M5 LINE L1 5511 5693 -486 1 1721 303 261 78 50 chrX 148956642 148956783 -17693513 + B1F SINE Alu 5 149 0 1 1721 2053 135 115 30 chrX 148957075 148957448 -17692848 + RLTR44A LTR ERVK 1 405 0 1 1721 728 199 37 6 chrX 148957529 148957691 -17692605 + L1_Rod LINE L1 3779 3945 -1902 1 1721 1682 185 174 29 chrX 148957700 148958154 -17692142 + RMER17C-int LTR ERVK 88 607 -2631 1 1721 33800 35 2 0 chrX 148958158 148964015 -17686281 + L1Md_T LINE L1 1 5589 -297 1 1721 9043 5 0 0 chrX 148964015 148965050 -17685246 + L1Md_T LINE L1 5590 6585 0 1 1721 495 0 0 0 chrX 148965247 148965302 -17684994 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 1721 405 0 0 0 chrX 148965302 148965346 -17684950 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1721 1064 127 22 16 chrX 148965352 148965536 -17684760 + RMER17C LTR ERVK 226 410 0 1 1721 4433 204 24 123 chrX 148965592 148965943 -17684353 + L1_Rod LINE L1 3975 4309 -1538 1 1721 3137 172 19 39 chrX 148965943 148966560 -17683736 - RLTR1D LTR ERV1 0 605 1 1 1721 4433 204 24 123 chrX 148966560 148966642 -17683654 + L1_Rod LINE L1 4310 4396 -1451 1 1721 1960 172 45 19 chrX 148966642 148967016 -17683280 - ORR1C2 LTR MaLR 0 384 1 1 1721 4433 204 24 123 chrX 148967016 148968260 -17682036 + L1_Rod LINE L1 4397 5487 -360 1 1721 13266 94 26 2 chrX 148968290 148970916 -17679380 + L1VL2 LINE L1 287 2982 -633 1 1721 29 90 0 0 chrX 148971336 148971414 -17678882 + AT_rich Low_complexity Low_complexity 1 78 0 1 1721 815 213 84 14 chrX 148971458 148971672 -17678624 + L1_Rod LINE L1 5492 5720 -127 1 1721 297 264 90 7 chrX 148972334 148972479 -17677817 - L1MB3 LINE L1 -210 5973 5817 1 1721 265 197 16 16 chrX 148972957 148973019 -17677277 + Tigger5 DNA MER2_type 52 113 -2293 1 1721 349 289 13 0 chrX 148973748 148973824 -17676472 + ID4_ SINE ID 4 80 -3 1 1721 2638 166 0 2 chrX 148973832 148974242 -17676054 - MTC LTR MaLR -12 409 1 1 1721 398 371 0 0 chrX 148974255 148974387 -17675909 + B1F SINE Alu 18 149 0 1 1721 864 98 0 22 chrX 148974646 148974781 -17675515 + L1Md_F2 LINE L1 6437 6568 -14 1 1721 607 301 41 146 chrX 148974840 148975155 -17675141 - MTE2a LTR MaLR -97 282 1 1 1721 323 358 65 20 chrX 148975421 148975772 -17674524 + L1MB8 LINE L1 5507 5873 -305 1 1721 5076 135 80 7 chrX 148976178 148977008 -17673288 + RMER19B LTR ERVK 1 890 -12 1 1721 362 291 9 19 chrX 148977788 148977893 -17672403 - PB1D10 SINE Alu -12 105 2 1 1721 266 64 0 41 chrX 148978015 148978064 -17672232 + L1Md_F2 LINE L1 6523 6569 -13 1 1721 405 256 67 17 chrX 148978176 148978295 -17672001 + Lx7 LINE L1 7089 7213 -483 1 1721 621 270 45 11 chrX 148978297 148978473 -17671823 + MTE2a LTR MaLR 198 379 0 1 1721 241 312 0 0 chrX 148978474 148978538 -17671758 + MTE2a-int LTR MaLR 3 66 -1514 1 1721 206 103 51 0 chrX 148979872 148979911 -17670385 + (TCTCTG)n Simple_repeat Simple_repeat 6 46 0 1 1721 566 153 0 0 chrX 148980266 148980364 -17669932 - MurERV4_19-int LTR ERVK -5440 340 243 1 1721 901 187 54 0 chrX 148980741 148980907 -17669389 + ORR1C2 LTR MaLR 208 382 -2 1 1721 2157 176 65 32 chrX 148981522 148982048 -17668248 + RMER4B LTR ERVK 17 585 0 1 1721 686 218 7 20 chrX 148982369 148982519 -17667777 + B1F1 SINE Alu 2 149 0 1 1721 1830 229 36 10 chrX 148982697 148983103 -17667193 - MTD LTR MaLR -14 405 1 1 1721 495 295 30 8 chrX 148983305 148983438 -17666858 - ID_B1 SINE B4 -2 222 87 1 1721 387 287 19 10 chrX 148983448 148983611 -17666685 + L1M4 LINE L1 5235 5399 -747 1 1721 236 281 0 15 chrX 148984400 148984465 -17665831 + GA-rich Low_complexity Low_complexity 2 65 0 1 1721 227 330 80 30 chrX 148985312 148985412 -17664884 + PB1D9 SINE Alu 7 111 -9 1 1721 580 93 0 20 chrX 148985813 148985912 -17664384 + (TTC)n Simple_repeat Simple_repeat 2 98 0 1 1721 29 28 0 0 chrX 148985912 148985948 -17664348 + AT_rich Low_complexity Low_complexity 1 36 0 1 1721 5622 51 0 19 chrX 148985948 148986667 -17663629 - L1Md_F2 LINE L1 -16 6566 5862 1 1721 830 129 0 49 chrX 148986663 148986826 -17663470 - L1Md_F2 LINE L1 -1 6581 6427 1 1721 29035 122 40 17 chrX 148986826 148992332 -17657964 - L1Md_F2 LINE L1 -5 5878 240 1 1721 1696 21 0 0 chrX 148992356 148992549 -17657747 - B2_Mm1t SINE B2 0 193 1 1 1721 6152 126 84 22 chrX 148992553 148993472 -17656824 - L1_Mur2 LINE L1 -1722 4155 3160 1 1721 1194 48 0 7 chrX 148993472 148993620 -17656676 - B1_Mm SINE Alu 0 147 1 1 1721 6152 126 84 22 chrX 148993620 148993943 -17656353 - L1_Mur2 LINE L1 -2718 3159 2835 1 1721 384 22 0 0 chrX 148993943 148993988 -17656308 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 1721 919 82 157 39 chrX 148993999 148994177 -17656119 - L1_Mus3 LINE L1 -3 6635 6437 1 1721 480 99 0 0 chrX 148994177 148994248 -17656048 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 1721 3144 165 3 8 chrX 148994249 148994884 -17655412 - L1_Mur2 LINE L1 -3834 2052 1421 1 1721 307 294 78 6 chrX 148995114 148995213 -17655083 - PB1D10 SINE Alu -15 105 1 1 1721 1211 199 12 56 chrX 148995542 148995780 -17654516 - MYSERV-int LTR ERVK -2 6548 6324 1 1721 3869 77 11 33 chrX 148995780 148996329 -17653967 + Lx LINE L1 6115 6651 -3 1 1721 1211 199 12 56 chrX 148996329 148996431 -17653865 - MYSERV-int LTR ERVK -227 6323 6223 1 1721 1161 185 96 11 chrX 148996433 148996921 -17653375 - L1VL4 LINE L1 -4438 1439 888 1 1721 30 27 0 0 chrX 148997457 148997494 -17652802 + AT_rich Low_complexity Low_complexity 1 37 0 1 1721 301 232 0 0 chrX 148997497 148997553 -17652743 - B1F1 SINE Alu -23 126 71 1 1721 588 290 30 20 chrX 148999043 148999240 -17651056 + RMER5 LTR ERV1 208 406 -128 1 1721 1167 22 0 48 chrX 149000496 149000684 -17649612 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 1721 306 0 0 0 chrX 149001563 149001597 -17648699 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 2 1721 9861 77 19 5 chrX 149001597 149003742 -17646554 - Lx3_Mus LINE L1 -18 6991 4807 3 1721 2198 121 15 6 chrX 149003742 149004076 -17646220 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1721 6588 63 12 18 chrX 149004078 149004933 -17645363 - IAPEz-int LTR ERVK -2 6479 5630 4 1721 13043 53 65 19 chrX 149004919 149007854 -17642442 - IAPEz-int LTR ERVK -3405 3076 8 4 1721 2198 121 15 6 chrX 149007854 149008188 -17642108 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1721 26568 72 9 1 chrX 149008188 149011823 -17638473 - Lx3_Mus LINE L1 -1074 4812 1085 3 1721 252 0 0 0 chrX 149011823 149011851 -17638445 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1721 21 0 0 0 chrX 149011853 149011874 -17638422 + AT_rich Low_complexity Low_complexity 1 21 0 6 1721 823 303 83 22 chrX 149012353 149012837 -17637459 - L1_Rod LINE L1 -503 5788 5287 7 1721 14538 85 14 27 chrX 149013383 149016356 -17633940 - L1VL2 LINE L1 -626 2989 64 8 1721 2807 167 46 41 chrX 149016355 149017146 -17633150 - L1_Mur1 LINE L1 -5890 1092 1 9 1721 1393 81 11 0 chrX 149017164 149017349 -17632947 - B2_Mm1t SINE B2 -5 188 2 1 1721 1042 315 54 5 chrX 149017896 149018282 -17632014 + MTD LTR MaLR 1 405 -14 1 1721 8114 63 0 0 chrX 149019611 149020840 -17629456 - L1_Mus1 LINE L1 0 6567 5339 1 1721 3100 44 57 0 chrX 149025450 149025839 -17624457 + RLTR10A LTR ERVK 1 411 0 1 1721 320 307 129 0 chrX 149026779 149026880 -17623416 + RSINE1 SINE B4 4 117 -48 1 1721 444 173 18 18 chrX 149028402 149028514 -17621782 + CT-rich Low_complexity Low_complexity 3 114 0 1 215 1062 189 115 40 chrX 149028665 149028967 -17621329 - IAPEY3_LTR LTR ERVK 0 311 1 1 1722 448 230 154 135 chrX 149029166 149029273 -17621023 + MT2A LTR ERVL 28 127 -406 1 1722 243 0 0 0 chrX 149029273 149029300 -17620996 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1722 1127 65 0 0 chrX 149029300 149029438 -17620858 - B1_Mm SINE Alu -9 138 1 1 1722 694 211 75 56 chrX 149029438 149029709 -17620587 + MT2A LTR ERVL 128 551 -50 1 1722 366 23 0 0 chrX 149029709 149029752 -17620544 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1722 1550 223 84 46 chrX 149029812 149030107 -17620189 - Lx7 LINE L1 -333 7363 7054 2 1722 279 0 0 0 chrX 149030107 149030138 -17620158 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1722 1550 223 84 46 chrX 149030138 149030236 -17620060 - Lx7 LINE L1 -643 7053 6955 2 1722 288 258 175 6 chrX 149030524 149030707 -17619589 + Lx9 LINE L1 7416 7629 -15 2 1722 7252 224 60 72 chrX 149030724 149031529 -17618767 - Lx6 LINE L1 -13 7447 6611 2 1722 2487 194 55 101 chrX 149031529 149032170 -17618126 - RMER19C LTR ERVK 0 611 1 2 1722 19171 204 57 95 chrX 149032170 149033098 -17617198 - Lx6 LINE L1 -850 6610 5733 2 1722 991 60 105 0 chrX 149033098 149033231 -17617065 - B1_Mus2 SINE Alu 0 147 1 2 1722 19171 147 46 164 chrX 149033231 149035510 -17614786 - Lx6 LINE L1 -148 5732 3480 2 1722 1733 140 51 79 chrX 149035510 149035866 -17614430 + ORR1B1 LTR MaLR 41 386 -8 2 1722 19171 147 46 164 chrX 149035866 149036016 -17614280 - Lx6 LINE L1 -148 3479 3330 2 1722 288 0 0 0 chrX 149036016 149036048 -17614248 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1722 19171 167 67 143 chrX 149036048 149039134 -17611162 - Lx6 LINE L1 -2551 3329 354 2 1722 772 187 153 42 chrX 149039135 149039325 -17610971 + URR1B DNA MER1_type 2 212 -13 2 1722 467 202 16 128 chrX 149039316 149039441 -17610855 + RMER13B LTR ERVK 8 118 -790 3 1722 1176 208 85 13 chrX 149039441 149039748 -17610548 + RMER13B LTR ERVK 566 894 -14 3 1722 24 67 0 0 chrX 149039843 149039888 -17610408 + AT_rich Low_complexity Low_complexity 1 45 0 3 1722 1464 17 103 0 chrX 149040066 149040241 -17610055 + B2_Mm1a SINE B2 1 193 0 3 1722 325 0 44 0 chrX 149040569 149040614 -17609682 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1722 316 246 309 0 chrX 149040784 149040894 -17609402 - B1_Mur2 SINE Alu -1 148 5 3 1722 303 238 0 0 chrX 149040930 149040993 -17609303 + Lx9 LINE L1 7396 7458 -186 3 1722 321 26 0 0 chrX 149040995 149041033 -17609263 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1722 308 244 12 0 chrX 149041033 149041119 -17609177 + Lx9 LINE L1 7522 7608 -36 3 1722 492 62 0 0 chrX 149041119 149041183 -17609113 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 1722 2768 172 157 26 chrX 149041193 149041820 -17608476 + Lx9 LINE L1 6800 7515 -129 3 1722 243 0 0 0 chrX 149041820 149041847 -17608449 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1722 2768 172 157 26 chrX 149041847 149041869 -17608427 + Lx9 LINE L1 7516 7533 -111 3 1722 777 229 31 77 chrX 149041881 149042103 -17608193 + B3 SINE B2 5 216 0 4 1722 315 314 57 8 chrX 149042703 149042825 -17607471 - B1F SINE Alu -20 129 2 4 1722 1432 155 220 0 chrX 149042857 149043180 -17607116 - MTD LTR MaLR -5 414 21 4 1722 204 179 0 0 chrX 149043190 149043229 -17607067 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1722 349 240 42 0 chrX 149043534 149043630 -17606666 - ID_B1 SINE B4 -1 223 124 4 1722 508 184 93 54 chrX 149045720 149045865 -17604431 - L1MD LINE L1 -747 5399 5240 4 1722 535 195 65 0 chrX 149045883 149046006 -17604290 + ID_B1 SINE B4 93 223 -1 4 1722 995 59 7 0 chrX 149048459 149048594 -17601702 + L1_Mus2 LINE L1 6431 6566 0 4 1722 28 86 0 0 chrX 149048649 149048719 -17601577 + AT_rich Low_complexity Low_complexity 1 70 0 4 1722 364 272 0 24 chrX 149048719 149048802 -17601494 - ID4_ SINE ID 0 83 3 4 1722 551 302 75 50 chrX 149048957 149049236 -17601060 - B4A SINE B4 -4 288 3 5 1722 480 256 101 0 chrX 149049280 149049409 -17600887 + B1F SINE Alu 1 142 -7 5 1722 490 265 51 14 chrX 149049597 149049735 -17600561 + B1F SINE Alu 2 144 -5 5 1722 944 62 8 0 chrX 149049921 149050050 -17600246 - B1_Mm SINE Alu -1 146 17 5 1722 267 31 0 0 chrX 149050051 149050083 -17600213 + (C)n Simple_repeat Simple_repeat 1 32 0 5 1722 563 318 4 127 chrX 149050098 149050343 -17599953 - ID_B1 SINE B4 -7 217 3 5 1722 230 299 0 43 chrX 149050991 149051061 -17599235 - MER58C DNA MER1_type 0 215 149 5 1722 582 229 69 0 chrX 149051447 149051578 -17598718 - B1F SINE Alu -7 142 3 5 1722 367 263 11 0 chrX 149051594 149051689 -17598607 - PB1 SINE Alu -3 124 29 5 1722 230 238 0 0 chrX 149052212 149052254 -17598042 + (CGTG)n Simple_repeat Simple_repeat 3 44 0 5 1722 358 319 33 60 chrX 149052266 149052416 -17597880 - MER20 DNA MER1_type -53 166 21 6 1722 310 266 0 0 chrX 149052442 149052506 -17597790 - ID4_ SINE ID -19 64 1 6 1722 291 274 100 36 chrX 149052684 149052794 -17597502 + PB1D10 SINE Alu 1 117 0 6 1722 237 308 143 9 chrX 149052897 149053002 -17597294 + PB1 SINE Alu 6 124 -3 6 1722 266 320 31 47 chrX 149053068 149053196 -17597100 - MER20 DNA MER1_type -33 186 61 6 1722 479 178 21 1 chrX 149054709 149054804 -17595492 + B1F SINE Alu 1 94 -23 6 1722 222 37 0 0 chrX 149054819 149054846 -17595450 + (GGGAGA)n Simple_repeat Simple_repeat 1 27 0 6 1722 233 227 158 13 chrX 149055080 149055156 -17595140 - PB1D9 SINE Alu -5 115 29 6 1722 688 243 109 31 chrX 149055147 149055376 -17594920 + MLT1A0 LTR MaLR 101 347 -18 6 1722 1446 183 154 8 chrX 149055493 149055857 -17594439 + MTD LTR MaLR 1 417 -2 6 1722 2738 286 139 5 chrX 149055941 149056953 -17593343 - Lx8 LINE L1 -69 7404 6257 7 1722 452 193 0 162 chrX 149057019 149057155 -17593141 + ID_B1 SINE B4 109 222 -2 7 1722 1248 54 0 0 chrX 149057192 149057339 -17592957 - B1_Mm SINE Alu 0 147 1 7 1722 357 24 0 0 chrX 149058542 149058584 -17591712 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1722 355 295 67 0 chrX 149059132 149059237 -17591059 + PB1D7 SINE Alu 2 113 -7 7 1722 259 258 45 15 chrX 149059255 149059322 -17590974 + ID4 SINE ID 2 70 -13 7 1722 287 259 16 66 chrX 149061386 149061568 -17588728 + (TATATG)n Simple_repeat Simple_repeat 4 176 0 7 1722 370 229 61 30 chrX 149062867 149062966 -17587330 - MTEb LTR MaLR -3 376 275 7 1722 298 275 196 72 chrX 149063587 149063834 -17586462 - MTEb LTR MaLR -100 270 2 7 1722 1269 189 132 16 chrX 149064166 149064460 -17585836 + ORR1D1 LTR MaLR 1 374 0 7 1722 266 342 12 12 chrX 149064721 149064801 -17585495 + RSINE1 SINE B4 86 165 0 7 1722 549 44 0 0 chrX 149064829 149064897 -17585399 + (GA)n Simple_repeat Simple_repeat 2 69 0 8 1722 263 93 23 0 chrX 149065755 149065798 -17584498 + (TA)n Simple_repeat Simple_repeat 2 45 0 8 1722 216 0 0 0 chrX 149065798 149065821 -17584475 + (TG)n Simple_repeat Simple_repeat 1 24 0 8 1722 192 77 0 0 chrX 149065926 149065952 -17584344 + (TA)n Simple_repeat Simple_repeat 2 27 0 8 1722 1388 66 22 6 chrX 149065961 149066144 -17584152 - B2_Mm2 SINE B2 -9 186 1 8 1722 23 0 0 0 chrX 149066149 149066172 -17584124 + AT_rich Low_complexity Low_complexity 1 23 0 8 1722 300 311 35 86 chrX 149066448 149066564 -17583732 - PB1D9 SINE Alu -10 110 1 8 1722 1035 287 42 39 chrX 149066975 149067261 -17583035 + B4A SINE B4 6 292 0 8 1722 884 250 42 19 chrX 149068001 149068213 -17582083 - ID_B1 SINE B4 -5 219 3 8 1722 284 273 0 49 chrX 149068292 149068373 -17581923 - ID4_ SINE ID -4 79 3 8 1722 304 239 125 9 chrX 149068386 149068483 -17581813 - PB1 SINE Alu -21 99 2 9 1722 728 268 68 0 chrX 149068723 149068913 -17581383 + B3 SINE B2 1 203 -13 9 1722 414 286 0 10 chrX 149069268 149069367 -17580929 - PB1D10 SINE Alu -1 116 19 9 1722 4699 103 47 50 chrX 149070034 149070760 -17579536 + L1VL1 LINE L1 365 1094 -5544 9 1722 210 37 0 0 chrX 149070760 149070787 -17579509 + (ATG)n Simple_repeat Simple_repeat 1 27 0 9 1722 30716 80 6 8 chrX 149070787 149075455 -17574841 + L1VL1 LINE L1 1095 5735 -148 9 1722 28 71 0 0 chrX 149075554 149075610 -17574686 + AT_rich Low_complexity Low_complexity 1 56 0 9 1722 5621 94 24 0 chrX 149075615 149076441 -17573855 + L1_Mus1 LINE L1 5722 6567 0 9 1722 232 234 63 16 chrX 149076810 149076936 -17573360 + L1ME4a LINE L1 5941 6072 -52 9 1722 216 0 0 0 chrX 149077839 149077863 -17572433 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1722 214 94 62 15 chrX 149079979 149080044 -17570252 + (TTATA)n Simple_repeat Simple_repeat 2 69 0 9 1722 557 251 74 55 chrX 149080138 149080401 -17569895 - L1MA4 LINE L1 -361 5936 5662 1 1722 270 354 63 46 chrX 149080853 149081208 -17569088 + ORR1E LTR MaLR 19 362 -12 1 1722 41 58 0 0 chrX 149081297 149081366 -17568930 + AT_rich Low_complexity Low_complexity 1 69 0 1 1722 229 218 91 0 chrX 149081534 149081589 -17568707 + RMER15 LTR ERVL 1 60 -515 1 1722 2148 206 98 41 chrX 149081641 149082152 -17568144 + RMER15 LTR ERVL 33 572 -3 1 1722 305 279 29 0 chrX 149082154 149082222 -17568074 + PB1D10 SINE Alu 41 110 -7 1 1722 477 287 17 9 chrX 149082330 149082446 -17567850 + MLT1A0 LTR MaLR 181 297 -68 1 1722 690 222 15 0 chrX 149082459 149082594 -17567702 + B1_Mur1 SINE Alu 7 143 -6 1 1722 411 301 175 3 chrX 149082786 149083106 -17567190 - L1MC3 LINE L1 -308 7477 7103 1 1722 393 206 36 0 chrX 149083116 149083200 -17567096 - MTEb LTR MaLR -13 366 281 1 1722 230 306 71 18 chrX 149083327 149083440 -17566856 - MTEb LTR MaLR -162 197 79 1 1722 227 141 90 90 chrX 149083672 149083750 -17566546 - L1MC4a LINE L1 -891 6991 6914 1 1722 260 71 48 0 chrX 149083897 149083939 -17566357 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 1 1722 222 150 0 0 chrX 149083939 149083979 -17566317 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1722 397 321 87 58 chrX 149084254 149084330 -17565966 + ID_B1 SINE B4 11 223 0 1 1722 528 278 30 38 chrX 149084330 149084461 -17565835 + B1F SINE Alu 20 149 0 1 1722 1188 301 13 16 chrX 149084580 149084891 -17565405 - RCHARR1 DNA MER1_type -662 312 3 1 1722 838 282 79 90 chrX 149085000 149085264 -17565032 + ORR1E LTR MaLR 15 274 -85 1 1722 294 29 0 0 chrX 149085264 149085299 -17564997 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 1722 838 282 79 90 chrX 149085299 149085377 -17564919 + ORR1E LTR MaLR 275 352 -7 1 1722 686 99 10 2 chrX 149085378 149085493 -17564803 + B1_Mus1 SINE Alu 1 120 0 1 1722 1364 217 80 0 chrX 149085711 149085997 -17564299 + MTEa LTR MaLR 69 377 -2 1 1722 283 275 98 98 chrX 149085997 149086127 -17564169 + MT2B LTR ERVL 146 275 -326 1 1722 517 162 46 0 chrX 149086024 149086128 -17564168 + B1_Mur4 SINE Alu 7 131 -19 1 1722 351 0 0 0 chrX 149086132 149086171 -17564125 + (CCAA)n Simple_repeat Simple_repeat 2 40 0 1 1722 414 337 12 6 chrX 149087782 149087955 -17562341 + (TCCA)n Simple_repeat Simple_repeat 4 177 0 1 1722 800 270 23 26 chrX 149088853 149089119 -17561177 + MLT1B LTR MaLR 1 265 -125 1 1722 521 265 26 0 chrX 149089101 149089218 -17561078 - RSINE1 SINE B4 -44 121 2 1 1722 441 224 40 10 chrX 149089584 149089683 -17560613 - PB1D10 SINE Alu -1 116 15 1 1722 265 309 90 56 chrX 149089823 149089967 -17560329 + B1F SINE Alu 1 149 0 1 1722 22 0 0 0 chrX 149089967 149089989 -17560307 + AT_rich Low_complexity Low_complexity 1 22 0 1 1722 280 186 160 0 chrX 149090244 149090311 -17559985 - B3 SINE B2 -66 127 51 1 1722 467 189 19 0 chrX 149090496 149090602 -17559694 + GA-rich Low_complexity Low_complexity 1 108 0 1 1722 361 308 22 11 chrX 149092977 149093069 -17557227 + PB1D10 SINE Alu 23 115 -2 1 1722 679 251 84 17 chrX 149093259 149093437 -17556859 + B3A SINE B2 4 193 -5 1 1722 276 374 44 60 chrX 149096597 149096624 -17553672 - B3A SINE B2 -10 188 10 1 1722 577 284 32 45 chrX 149096624 149096779 -17553517 - RSINE1 SINE B4 -2 163 11 1 1722 2489 214 119 43 chrX 149096782 149096842 -17553454 + L1_Mur3 LINE L1 3413 3475 -2405 1 1722 697 187 71 7 chrX 149096842 149096982 -17553314 + B1_Mur2 SINE Alu 1 149 0 1 1722 2489 214 119 43 chrX 149096982 149097801 -17552495 + L1_Mur3 LINE L1 3476 4359 -1521 1 1722 240 35 0 0 chrX 149097805 149097834 -17552462 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 1 1722 24351 135 19 32 chrX 149097860 149104210 -17546086 + L1_Mus4 LINE L1 378 6633 -3 1 1722 1972 248 54 8 chrX 149104200 149104846 -17545450 + L1_Mur3 LINE L1 4362 5037 -843 1 1722 476 179 72 36 chrX 149104846 149104985 -17545311 + MER58B DNA MER1_type 79 222 -119 1 1722 475 311 31 75 chrX 149105986 149106212 -17544084 + ID_B1 SINE B4 2 217 -7 1 1722 29 60 0 0 chrX 149106603 149106653 -17543643 + AT_rich Low_complexity Low_complexity 1 50 0 1 1722 561 258 46 15 chrX 149106672 149106802 -17543494 + ID_B1 SINE B4 90 223 -1 1 1722 1130 115 0 0 chrX 149106805 149106962 -17543334 + B2_Mm2 SINE B2 2 158 -37 1 1722 351 0 0 0 chrX 149106963 149107002 -17543294 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 1 1722 1269 74 80 0 chrX 149107020 149107195 -17543101 + B2_Mm2 SINE B2 2 190 -5 1 1722 230 289 24 0 chrX 149107283 149107366 -17542930 + (TA)n Simple_repeat Simple_repeat 1 85 0 1 1722 242 164 0 18 chrX 149107380 149107436 -17542860 + (CATA)n Simple_repeat Simple_repeat 1 55 0 1 1722 288 77 0 0 chrX 149107867 149107906 -17542390 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1 1722 336 245 122 0 chrX 149108488 149108586 -17541710 - PB1D10 SINE Alu -7 110 1 1 1722 780 225 56 6 chrX 149108586 149108667 -17541629 - ID_B1 SINE B4 -134 90 2 1 1722 673 75 203 63 chrX 149109049 149109192 -17541104 - L1Md_F2 LINE L1 0 6582 6420 1 1722 512 279 15 15 chrX 149109750 149109881 -17540415 + B1F SINE Alu 1 131 -18 1 1722 1234 132 11 0 chrX 149110230 149110419 -17539877 - B2_Mm1t SINE B2 -2 191 1 1 1722 439 262 23 91 chrX 149110444 149110620 -17539676 + RSINE1 SINE B4 1 164 -1 1 1722 591 296 69 51 chrX 149111548 149111822 -17538474 - B4 SINE B4 -12 280 2 1 1722 216 0 0 0 chrX 149112702 149112726 -17537570 + (TC)n Simple_repeat Simple_repeat 2 25 0 1 1722 869 145 65 7 chrX 149112742 149112895 -17537401 - RMER19B LTR ERVK 0 902 741 1 1722 476 263 118 15 chrX 149112903 149113038 -17537258 - B1F2 SINE Alu 0 149 1 1 1722 246 287 145 110 chrX 149112909 149113054 -17537242 - B4 SINE B4 -72 220 71 1 1722 514 250 70 8 chrX 149113421 149113550 -17536746 - RMER15 LTR ERVL -18 557 421 1 1722 496 278 0 17 chrX 149114341 149114458 -17535838 + PB1D7 SINE Alu 6 120 0 1 1722 189 0 0 0 chrX 149114586 149114607 -17535689 + (CCCCCA)n Simple_repeat Simple_repeat 3 23 0 1 1722 10469 126 29 23 chrX 149114930 149115194 -17535102 + Lx LINE L1 4062 4342 -1541 1 1722 1130 68 7 0 chrX 149115194 149115341 -17534955 + B1_Mus1 SINE Alu 1 148 0 1 1722 10469 124 24 14 chrX 149115341 149117641 -17532655 + Lx LINE L1 4343 6651 -3 1 1722 21 0 0 0 chrX 149117894 149117915 -17532381 + AT_rich Low_complexity Low_complexity 1 21 0 1 1722 397 305 0 0 chrX 149117976 149118071 -17532225 + PB1D10 SINE Alu 10 104 -13 1 1722 555 237 22 37 chrX 149118157 149118293 -17532003 + ID_B1 SINE B4 91 224 0 1 1722 459 0 0 0 chrX 149118527 149118578 -17531718 + (TTA)n Simple_repeat Simple_repeat 3 53 0 1 1722 1224 64 0 0 chrX 149118578 149118735 -17531561 - B2_Mm2 SINE B2 -38 157 1 1 1722 279 300 29 0 chrX 149118765 149118835 -17531461 + ID4 SINE ID 8 79 -4 1 1722 345 273 91 0 chrX 149119151 149119250 -17531046 - PB1D10 SINE Alu -1 116 9 1 1722 2836 185 91 42 chrX 149120151 149120874 -17529422 + L1Md_F LINE L1 109 867 -5652 1 1722 7142 55 1 3 chrX 149120872 149122309 -17527987 + L1_Mus1 LINE L1 5132 6563 -4 1 1722 430 286 43 26 chrX 149122488 149122603 -17527693 + PB1D10 SINE Alu 1 117 0 1 1722 1099 76 0 0 chrX 149122618 149122763 -17527533 + B1_Mus1 SINE Alu 3 147 -1 1 1722 204 64 64 0 chrX 149122766 149122813 -17527483 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 1 1722 412 242 0 45 chrX 149122922 149123052 -17527244 + ID4_ SINE ID 8 123 -29 1 1722 189 107 0 0 chrX 149123632 149123660 -17526636 + (GGAGA)n Simple_repeat Simple_repeat 1 28 0 1 1722 274 258 103 0 chrX 149124382 149124479 -17525817 - B1F2 SINE Alu -2 147 41 1 1722 2939 82 17 2 chrX 149124523 149124936 -17525360 + BGLII LTR ERVK 3 421 0 1 1722 953 69 8 0 chrX 149126527 149126648 -17523648 + B1_Mm SINE Alu 17 138 -9 1 1722 243 0 0 0 chrX 149126648 149126675 -17523621 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1722 510 209 41 98 chrX 149126895 149127017 -17523279 + PB1D9 SINE Alu 6 120 0 1 1722 2006 161 108 21 chrX 149127259 149127646 -17522650 + MTC LTR MaLR 1 421 0 1 1722 324 275 0 36 chrX 149127761 149127844 -17522452 + ID4 SINE ID 2 81 -2 1 1722 189 0 0 0 chrX 149127934 149127955 -17522341 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1 1722 459 337 23 46 chrX 149128037 149128211 -17522085 - B4A SINE B4 -43 249 80 1 1722 256 233 93 27 chrX 149128160 149128235 -17522061 - ID4 SINE ID -3 80 1 1 1722 239 227 0 0 chrX 149128434 149128478 -17521818 - PB1D9 SINE Alu -46 74 31 1 1722 1175 68 0 0 chrX 149128657 149128803 -17521493 + B1_Mus2 SINE Alu 2 147 0 1 1722 850 161 14 14 chrX 149128992 149129137 -17521159 + B1_Mur4 SINE Alu 5 149 -1 1 1722 442 269 95 66 chrX 149129245 149129387 -17520909 + ORR1D2 LTR MaLR 74 199 -171 1 1722 3129 37 34 3 chrX 149129387 149129771 -17520525 + MTA_Mm LTR MaLR 1 396 0 1 1722 442 340 65 58 chrX 149129771 149129919 -17520377 + ORR1D2 LTR MaLR 200 360 -10 1 1722 460 326 7 20 chrX 149129916 149130063 -17520233 + MER2B DNA MER2_type 186 330 -6 1 1722 329 281 83 25 chrX 149130715 149130872 -17519424 - L1MB8 LINE L1 -2 6176 6011 1 1722 471 190 9 79 chrX 149130996 149131110 -17519186 - PB1D10 SINE Alu -11 106 1 1 1722 464 282 56 84 chrX 149131128 149131341 -17518955 + RLTR25B LTR ERVK 1 207 -821 1 1722 487 116 11 11 chrX 149131610 149131697 -17518599 + L1_Mus1 LINE L1 6481 6567 0 1 1722 353 232 0 14 chrX 149132558 149132628 -17517668 - PB1D10 SINE Alu -2 115 47 1 1722 557 234 10 17 chrX 149132634 149132758 -17517538 + PB1D7 SINE Alu 9 122 -27 2 1722 195 42 0 0 chrX 149132945 149132969 -17517327 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 1722 444 293 10 0 chrX 149133009 149133108 -17517188 + RSINE1 SINE B4 2 101 -64 2 1722 21 57 0 0 chrX 149133215 149133250 -17517046 + AT_rich Low_complexity Low_complexity 1 35 0 2 1722 328 213 16 0 chrX 149133250 149133311 -17516985 + ID4 SINE ID 2 63 -20 2 1722 300 247 87 76 chrX 149133311 149133342 -17516954 + ID_B1 SINE B4 2 94 -130 2 1722 727 206 7 28 chrX 149133380 149133525 -17516771 - B1_Mur1 SINE Alu -6 143 2 2 1722 257 216 95 0 chrX 149134051 149134125 -17516171 + L1M4 LINE L1 5731 5811 -363 2 1722 253 317 0 0 chrX 149134129 149134189 -17516107 + ID4_ SINE ID 8 67 -16 2 1722 1049 241 43 17 chrX 149134209 149134559 -17515737 + L1MB3 LINE L1 5821 6179 -4 2 1722 648 103 138 0 chrX 149134690 149134806 -17515490 + Lx3C LINE L1 6844 6975 -1 2 1722 220 342 13 40 chrX 149134845 149134921 -17515375 - B4 SINE B4 -218 74 1 2 1722 237 235 0 0 chrX 149134922 149134973 -17515323 - B1F SINE Alu -4 145 95 2 1722 730 236 95 119 chrX 149136438 149136890 -17513406 + RMER10A LTR ERVL 2 442 0 2 1722 393 109 0 2 chrX 149137512 149137572 -17512724 - Lx LINE L1 -328 6254 6191 2 1722 2007 105 10 10 chrX 149137574 149137883 -17512413 + Lx LINE L1 6343 6651 -3 2 1722 374 281 22 11 chrX 149137908 149137998 -17512298 + PB1D10 SINE Alu 4 94 -23 2 1722 259 266 47 0 chrX 149140086 149140150 -17510146 + LTR41B LTR ERVL 121 187 -571 2 1722 201 121 0 0 chrX 149140567 149140600 -17509696 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1722 320 259 11 110 chrX 149140653 149140744 -17509552 - PB1 SINE Alu -26 101 15 2 1722 762 78 0 0 chrX 149140800 149140903 -17509393 + B1_Mus2 SINE Alu 45 147 0 2 1722 436 263 119 8 chrX 149141298 149141432 -17508864 + B1F1 SINE Alu 1 149 0 2 1722 180 0 0 0 chrX 149141449 149141469 -17508827 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1722 490 317 7 14 chrX 149141479 149141623 -17508673 + ID_B1 SINE B4 82 224 0 2 1722 226 205 0 64 chrX 149141624 149141718 -17508578 + GA-rich Low_complexity Low_complexity 1 88 0 2 1722 462 205 194 16 chrX 149141868 149141992 -17508304 + ID_B1 SINE B4 79 224 0 2 1722 618 232 35 21 chrX 149142119 149142260 -17508036 + ID_B1 SINE B4 82 224 0 2 1722 221 57 0 28 chrX 149142611 149142647 -17507649 + (CTGGGG)n Simple_repeat Simple_repeat 3 37 0 2 1722 336 157 57 92 chrX 149142776 149142882 -17507414 + PB1D10 SINE Alu 18 129 -20 2 1722 337 293 105 62 chrX 149143068 149143249 -17507047 + MLT2E LTR ERVL 89 284 -345 2 1722 335 342 79 67 chrX 149143635 149143889 -17506407 - ORR1E LTR MaLR -102 257 1 2 1722 297 226 0 0 chrX 149144142 149144204 -17506092 - MER20 DNA MER1_type -156 63 2 2 1722 276 326 92 45 chrX 149144629 149144918 -17505378 + MTE2a LTR MaLR 84 379 0 2 1722 225 375 39 0 chrX 149145996 149146100 -17504196 + PB1D10 SINE Alu 2 109 -8 2 1722 189 0 0 0 chrX 149146910 149146931 -17503365 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 2 1722 370 263 31 31 chrX 149146933 149147022 -17503274 - B1_Mur3 SINE Alu -12 108 18 2 1722 1620 16 11 0 chrX 149147022 149147207 -17503089 + B2_Mm1a SINE B2 1 187 -6 2 1722 370 258 31 31 chrX 149147207 149147225 -17503071 - B1_Mur3 SINE Alu -132 17 1 2 1722 564 250 28 7 chrX 149147245 149147386 -17502910 - ID_B1 SINE B4 0 224 81 2 1722 1018 294 50 28 chrX 149147736 149148058 -17502238 - MER2 DNA MER2_type 0 345 17 2 1722 1328 19 0 0 chrX 149148117 149148274 -17502022 + B2_Mm1a SINE B2 4 160 -33 2 1722 351 0 0 0 chrX 149148274 149148313 -17501983 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 2 1722 798 269 0 18 chrX 149148669 149148839 -17501457 + B3A SINE B2 1 167 -31 2 1722 473 217 16 57 chrX 149149113 149149235 -17501061 + PB1D10 SINE Alu 1 117 0 2 1722 258 278 33 22 chrX 149149244 149149336 -17500960 - MIRc SINE MIR -77 191 99 2 1722 330 224 58 12 chrX 149150284 149150370 -17499926 + MLT1C LTR MaLR 35 124 -343 2 1722 327 308 59 20 chrX 149150421 149150596 -17499700 + MLT1C LTR MaLR 223 413 -54 2 1722 348 236 0 14 chrX 149151472 149151545 -17498751 - tRNA-Ala-GCG tRNA tRNA -2 73 2 2 1722 8930 134 25 17 chrX 149152141 149153835 -17496461 + Lx LINE L1 1718 3425 -2461 2 1722 1683 16 5 0 chrX 149153835 149154027 -17496269 + B2_Mm1a SINE B2 1 193 0 2 1722 1005 156 0 37 chrX 149154038 149154225 -17496071 + L1VL4 LINE L1 25 204 -6098 2 1722 6799 111 22 5 chrX 149154230 149155872 -17494424 + Lx LINE L1 4975 6642 -12 2 1722 1906 117 164 5 chrX 149155909 149156132 -17494164 + L1_Mur1 LINE L1 3925 4204 -1682 2 1722 3247 41 10 0 chrX 149156132 149156524 -17493772 + MTA_Mm LTR MaLR 1 396 0 2 1722 1906 117 164 5 chrX 149156524 149156677 -17493619 + L1_Mur1 LINE L1 4205 4361 -1525 2 1722 2834 126 111 15 chrX 149156672 149157197 -17493099 + Lx3C LINE L1 6380 6954 -22 2 1722 366 42 0 0 chrX 149157201 149157249 -17493047 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1722 9095 138 56 51 chrX 149157253 149159294 -17491002 + L1_Mur3 LINE L1 2995 5046 -834 2 1723 388 340 50 85 chrX 149160235 149160553 -17489743 - RLTR25B LTR ERVK -716 312 6 2 1723 5510 186 40 76 chrX 149160557 149161526 -17488770 + Lx6 LINE L1 5020 5842 -44 2 1723 1172 50 0 0 chrX 149161526 149161666 -17488630 + B1_Mm SINE Alu 2 141 -6 2 1723 5510 191 42 127 chrX 149161666 149162670 -17487626 + Lx6 LINE L1 5829 6737 -723 2 1723 999 6 0 77 chrX 149162670 149162865 -17487431 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 1723 5510 191 42 127 chrX 149162865 149163289 -17487007 + Lx6 LINE L1 6738 7124 -336 2 1723 310 324 19 0 chrX 149163440 149163548 -17486748 + Lx7 LINE L1 7207 7316 -380 2 1723 35 24 0 0 chrX 149163719 149163761 -17486535 + AT_rich Low_complexity Low_complexity 1 42 0 2 1723 653 248 84 7 chrX 149164256 149164410 -17485886 - ID_B1 SINE B4 -4 220 55 2 1723 248 281 0 68 chrX 149164453 149164541 -17485755 - ID2 SINE ID 0 83 2 2 1723 627 181 125 8 chrX 149164666 149164794 -17485502 + B1F SINE Alu 6 148 -1 2 1723 663 280 6 25 chrX 149164845 149165006 -17485290 + B3 SINE B2 31 188 -28 2 1723 534 31 0 0 chrX 149165184 149165248 -17485048 + (TC)n Simple_repeat Simple_repeat 2 65 0 2 1723 207 0 0 0 chrX 149165248 149165270 -17485026 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1723 320 103 310 0 chrX 149165279 149165337 -17484959 - ID4_ SINE ID -7 76 1 2 1723 247 113 32 0 chrX 149165602 149165664 -17484632 + (TTTTG)n Simple_repeat Simple_repeat 1 64 0 2 1723 522 274 48 59 chrX 149165825 149165862 -17484434 - B3 SINE B2 0 216 182 2 1723 348 24 0 0 chrX 149165862 149165903 -17484393 + (TATG)n Simple_repeat Simple_repeat 4 44 0 2 1723 522 274 48 59 chrX 149165903 149166051 -17484245 - B3 SINE B2 -35 181 33 2 1723 246 264 0 0 chrX 149166056 149166109 -17484187 + PB1D7 SINE Alu 68 120 0 2 1723 388 298 105 18 chrX 149166117 149166288 -17484008 + B3A SINE B2 3 188 -10 2 1723 994 79 58 0 chrX 149167341 149167480 -17482816 - B1_Mus1 SINE Alu 0 148 2 2 1723 472 268 0 0 chrX 149167509 149167621 -17482675 + RSINE1 SINE B4 3 114 -51 2 1723 216 195 0 0 chrX 149167637 149167678 -17482618 + CT-rich Low_complexity Low_complexity 1 41 0 2 1723 445 232 11 0 chrX 149167859 149167954 -17482342 + PB1D10 SINE Alu 22 117 0 2 1723 54 0 0 0 chrX 149168176 149168230 -17482066 + AT_rich Low_complexity Low_complexity 1 54 0 2 1723 538 257 28 35 chrX 149168240 149168381 -17481915 - RSINE1 SINE B4 -14 151 12 2 1723 21 0 0 0 chrX 149168394 149168415 -17481881 + AT_rich Low_complexity Low_complexity 1 21 0 2 1723 450 322 20 20 chrX 149168439 149168588 -17481708 + B1F SINE Alu 1 149 0 2 1723 895 198 35 84 chrX 149168939 149169165 -17481131 - B3 SINE B2 0 216 2 2 1723 1079 58 0 21 chrX 149169281 149169423 -17480873 + B1_Mus2 SINE Alu 1 139 -8 2 1723 282 208 169 0 chrX 149169583 149169660 -17480636 + 5S rRNA rRNA 1 90 -31 2 1723 294 271 23 23 chrX 149169726 149169813 -17480483 - ID4_ SINE ID -62 90 4 2 1723 336 256 53 46 chrX 149170092 149170223 -17480073 + RMER4A LTR ERVK 8 139 -327 2 1723 254 342 13 0 chrX 149170369 149170445 -17479851 + ID4_ SINE ID 4 80 -3 2 1723 186 43 0 0 chrX 149170449 149170472 -17479824 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 2 1723 673 195 85 45 chrX 149170586 149170744 -17479552 + B3A SINE B2 1 167 -31 2 1723 333 0 0 0 chrX 149170744 149170781 -17479515 + (CAGA)n Simple_repeat Simple_repeat 4 40 0 2 1723 673 195 85 45 chrX 149170781 149170799 -17479497 + B3A SINE B2 168 184 -14 2 1723 234 274 0 0 chrX 149170932 149170994 -17479302 + L1ME2 LINE L1 5872 5933 -231 2 1723 501 206 90 62 chrX 149170995 149171140 -17479156 + B1F1 SINE Alu 1 149 0 2 1723 450 83 0 0 chrX 149171709 149171781 -17478515 + (TG)n Simple_repeat Simple_repeat 2 73 0 2 1723 560 238 32 0 chrX 149171800 149171926 -17478370 - B1F1 SINE Alu -10 139 10 2 1723 868 154 14 20 chrX 149172095 149172241 -17478055 + B1_Mur3 SINE Alu 2 146 -3 2 1723 642 281 89 46 chrX 149173595 149173964 -17476332 + L1MB7 LINE L1 5733 6117 -67 2 1723 258 238 0 16 chrX 149173984 149174048 -17476248 + B1F SINE Alu 80 142 -7 2 1723 490 258 214 5 chrX 149174319 149174506 -17475790 + URR1A DNA MER1_type 1 226 0 2 1723 354 276 174 0 chrX 149176784 149176882 -17473414 + PB1 SINE Alu 1 115 -12 2 1723 306 316 10 30 chrX 149176931 149177032 -17473264 + ORR1E LTR MaLR 1 99 -260 2 1723 25 0 0 0 chrX 149177527 149177552 -17472744 + AT_rich Low_complexity Low_complexity 1 25 0 2 1723 347 224 118 0 chrX 149177607 149177683 -17472613 + B3 SINE B2 2 86 -130 2 1723 230 276 130 61 chrX 149177683 149177738 -17472558 + B4 SINE B4 2 141 -151 3 1723 202 182 0 0 chrX 149179224 149179257 -17471039 + (CTCA)n Simple_repeat Simple_repeat 2 34 0 3 1723 210 71 0 0 chrX 149179412 149179440 -17470856 + (CAGCC)n Simple_repeat Simple_repeat 3 30 0 3 1723 241 295 0 0 chrX 149179653 149179714 -17470582 + GA-rich Low_complexity Low_complexity 3 63 0 3 1723 26 0 0 0 chrX 149179938 149179964 -17470332 + AT_rich Low_complexity Low_complexity 1 26 0 3 1723 737 242 141 25 chrX 149180257 149180456 -17469840 + ID_B1 SINE B4 2 223 -1 3 1723 314 239 0 11 chrX 149180881 149180970 -17469326 + BC1_Mm scRNA scRNA 11 98 -54 3 1723 315 279 21 41 chrX 149180962 149181059 -17469237 - B1_Mur1 SINE Alu -13 136 42 3 1723 1348 77 38 0 chrX 149181235 149181418 -17468878 + B2_Mm2 SINE B2 1 190 -5 3 1723 286 256 37 0 chrX 149181521 149181603 -17468693 + PB1D10 SINE Alu 26 110 -7 3 1723 469 183 43 0 chrX 149182801 149182894 -17467402 - B1F SINE Alu -5 144 48 3 1723 588 214 213 35 chrX 149183237 149183411 -17466885 - B3 SINE B2 -7 209 5 3 1723 616 277 25 12 chrX 149183679 149183840 -17466456 + B3A SINE B2 2 164 -34 3 1723 423 0 0 0 chrX 149183849 149183896 -17466400 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1723 817 248 141 22 chrX 149183923 149183970 -17466326 + Lx8 LINE L1 6805 6850 -623 3 1723 198 0 0 0 chrX 149183970 149183992 -17466304 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 3 1723 817 275 250 68 chrX 149183992 149184498 -17465798 + Lx8 LINE L1 6851 7456 -17 3 1723 1138 64 0 0 chrX 149184506 149184647 -17465649 + B1_Mus1 SINE Alu 1 141 -7 3 1723 21 0 0 0 chrX 149184692 149184713 -17465583 + AT_rich Low_complexity Low_complexity 1 21 0 3 1723 278 279 97 11 chrX 149184820 149184924 -17465372 - MER5A DNA MER1_type -83 106 1 3 1723 573 250 118 16 chrX 149184962 149185149 -17465147 - B3 SINE B2 -10 206 1 3 1723 264 253 76 0 chrX 149185157 149185236 -17465060 + MER58A DNA MER1_type 43 127 -97 3 1723 518 270 116 40 chrX 149185447 149185698 -17464598 + L1ME1 LINE L1 5702 5971 -208 3 1723 29 60 0 0 chrX 149185938 149185988 -17464308 + AT_rich Low_complexity Low_complexity 1 50 0 3 1723 273 57 0 0 chrX 149186063 149186098 -17464198 + (T)n Simple_repeat Simple_repeat 1 35 0 3 1723 1232 54 0 0 chrX 149186098 149186246 -17464050 - B1_Mus1 SINE Alu 0 148 1 3 1723 622 35 0 23 chrX 149186444 149186531 -17463765 + B1_Mus2 SINE Alu 63 147 0 3 1723 1436 58 10 20 chrX 149186832 149187027 -17463269 + B2_Mm1t SINE B2 1 193 0 3 1723 342 232 10 59 chrX 149187501 149187602 -17462694 - RSINE1 SINE B4 -62 103 8 3 1723 1118 256 83 53 chrX 149187770 149188241 -17462055 + L1MB7 LINE L1 5657 6141 -43 3 1723 445 283 0 0 chrX 149188241 149188340 -17461956 + PB1 SINE Alu 1 99 -28 3 1723 1371 263 59 0 chrX 149188359 149188713 -17461583 + MTE2b LTR MaLR 1 375 -4 3 1723 486 141 285 11 chrX 149188748 149188878 -17461418 + B3 SINE B2 1 163 -53 3 1723 826 111 7 59 chrX 149188898 149189051 -17461245 + URR1A DNA MER1_type 81 225 -1 3 1723 241 320 32 8 chrX 149189323 149189449 -17460847 + RMER15 LTR ERVL 442 570 -5 3 1723 374 293 72 36 chrX 149189739 149189877 -17460419 - ID_B1 SINE B4 -1 223 81 3 1723 23 0 0 0 chrX 149189962 149189985 -17460311 + AT_rich Low_complexity Low_complexity 1 23 0 3 1723 278 299 0 0 chrX 149190044 149190111 -17460185 - tRNA-Ala-GCA tRNA tRNA -8 67 1 3 1723 1628 36 0 5 chrX 149191185 149191378 -17458918 + B2_Mm1a SINE B2 1 192 -1 3 1723 236 212 121 0 chrX 149191845 149191911 -17458385 - ID4 SINE ID -4 79 6 3 1723 997 127 121 0 chrX 149191984 149192149 -17458147 + B2_Mm1t SINE B2 1 185 -8 3 1723 1841 76 28 110 chrX 149192229 149192516 -17457780 + ORR1A4 LTR MaLR 1 285 -44 3 1723 1458 71 0 15 chrX 149192516 149192716 -17457580 + L1_Mus1 LINE L1 6371 6567 0 3 1723 1841 76 28 110 chrX 149192716 149192784 -17457512 + ORR1A4 LTR MaLR 286 327 -2 3 1723 1246 106 12 7 chrX 149192821 149193030 -17457266 + B2_Mm2 SINE B2 1 215 -1 3 1723 382 209 131 60 chrX 149193716 149193884 -17456412 + HAL1 LINE L1 1016 1195 -1312 3 1723 318 80 0 0 chrX 149194102 149194152 -17456144 + (TC)n Simple_repeat Simple_repeat 2 51 0 3 1723 689 110 0 27 chrX 149194170 149194282 -17456014 - B1_Mus1 SINE Alu -5 143 35 3 1723 294 27 0 0 chrX 149194284 149194296 -17456000 + (T)n Simple_repeat Simple_repeat 1 12 0 3 1723 1164 69 14 0 chrX 149194296 149194441 -17455855 - B1_Mus2 SINE Alu 0 147 1 3 1723 294 27 0 0 chrX 149194441 149194465 -17455831 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1723 571 163 0 0 chrX 149194467 149194559 -17455737 - 4.5SRNA scRNA scRNA -2 92 1 3 1723 212 288 82 0 chrX 149194654 149194727 -17455569 + ID4 SINE ID 2 80 -3 3 1723 307 292 0 14 chrX 149194772 149194845 -17455451 + ID4 SINE ID 6 77 -6 3 1723 245 29 29 0 chrX 149194845 149194879 -17455417 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 3 1723 1558 216 75 23 chrX 149194919 149195317 -17454979 - MTD LTR MaLR 0 419 1 3 1723 244 286 39 0 chrX 149195393 149195470 -17454826 + MER20 DNA MER1_type 135 214 -5 3 1723 1119 47 0 57 chrX 149195800 149195957 -17454339 + B1_Mus1 SINE Alu 1 148 0 3 1723 382 160 105 87 chrX 149196086 149196267 -17454029 + Lx7 LINE L1 7565 7696 0 3 1723 1173 69 0 0 chrX 149196269 149196414 -17453882 + B1_Mus2 SINE Alu 2 146 -1 3 1723 193 29 29 29 chrX 149197786 149197821 -17452475 + (CAAAAA)n Simple_repeat Simple_repeat 3 37 0 3 1723 358 257 186 48 chrX 149197922 149198110 -17452186 + ID_B1 SINE B4 1 214 -10 3 1723 847 195 132 0 chrX 149198116 149198306 -17451990 + B3 SINE B2 2 216 0 3 1723 1107 82 0 26 chrX 149198327 149198461 -17451835 + B1_Mm SINE Alu 1 134 -13 3 1723 182 62 0 30 chrX 149198461 149198494 -17451802 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 3 1723 1107 82 0 26 chrX 149198494 149198510 -17451786 + B1_Mm SINE Alu 135 147 0 3 1723 26 0 0 0 chrX 149199848 149199874 -17450422 + AT_rich Low_complexity Low_complexity 1 26 0 3 1723 448 291 33 0 chrX 149199936 149200087 -17450209 + MER20 DNA MER1_type 36 191 -28 3 1723 33 66 0 0 chrX 149200557 149200618 -17449678 + AT_rich Low_complexity Low_complexity 1 61 0 3 1723 742 221 110 0 chrX 149200905 149201068 -17449228 - B3 SINE B2 -28 188 8 3 1723 253 214 130 91 chrX 149201187 149201264 -17449032 - RSINE1 SINE B4 -83 82 3 3 1723 1169 62 0 0 chrX 149201686 149201831 -17448465 - B1_Mus2 SINE Alu -2 145 1 3 1723 257 106 128 0 chrX 149201870 149201917 -17448379 + B3A SINE B2 1 53 -145 3 1723 477 90 0 0 chrX 149201932 149201999 -17448297 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 1723 180 0 0 0 chrX 149202030 149202050 -17448246 + (TA)n Simple_repeat Simple_repeat 1 20 0 3 1723 575 173 0 37 chrX 149202208 149202316 -17447980 + B3 SINE B2 27 130 -86 3 1723 336 306 0 0 chrX 149202399 149202507 -17447789 + PB1D10 SINE Alu 9 116 -1 3 1723 243 0 0 0 chrX 149202507 149202534 -17447762 + (TAAAAA)n Simple_repeat Simple_repeat 1 27 0 3 1723 279 171 75 50 chrX 149202534 149202614 -17447682 + ID4_ SINE ID 2 83 0 3 1723 251 239 0 29 chrX 149202639 149202708 -17447588 + ID4 SINE ID 2 68 -15 3 1723 208 226 0 19 chrX 149204186 149204240 -17446056 + G-rich Low_complexity Low_complexity 5 57 0 3 1723 311 245 202 35 chrX 149205024 149205138 -17445158 - B3 SINE B2 -29 187 55 3 1723 291 268 25 51 chrX 149205252 149205370 -17444926 - PB1D7 SINE Alu 0 120 6 3 1723 358 241 54 36 chrX 149205274 149205386 -17444910 - ID_B1 SINE B4 -42 182 69 3 1723 248 211 31 31 chrX 149205705 149205803 -17444493 + (TTTG)n Simple_repeat Simple_repeat 2 99 0 3 1723 359 143 32 0 chrX 149205813 149205876 -17444420 - B1_Mur3 SINE Alu -2 147 83 3 1723 344 245 64 64 chrX 149205992 149206101 -17444195 + RSINE1 SINE B4 1 109 -56 3 1723 853 244 13 70 chrX 149206172 149206401 -17443895 - B3 SINE B2 0 216 1 3 1723 2145 112 5 63 chrX 149206871 149207298 -17442998 + RMER17C LTR ERVK 1 402 -8 3 1723 666 173 146 12 chrX 149207787 149207951 -17442345 - B2_Mm2 SINE B2 -8 187 2 3 1723 189 0 0 0 chrX 149208082 149208103 -17442193 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 3 1723 930 57 0 0 chrX 149208106 149208228 -17442068 - B1_Mm SINE Alu -5 142 21 3 1723 1261 77 32 27 chrX 149208240 149208426 -17441870 - B2_Mm2 SINE B2 -8 187 1 3 1723 587 81 0 11 chrX 149208432 149208519 -17441777 + (TTTC)n Simple_repeat Simple_repeat 3 88 0 3 1723 285 98 0 0 chrX 149208517 149208558 -17441738 + (TTA)n Simple_repeat Simple_repeat 2 42 0 3 1723 991 132 0 0 chrX 149208562 149208706 -17441590 - B1_Mus1 SINE Alu -1 147 4 3 1723 1167 41 7 7 chrX 149208730 149208877 -17441419 + B1_Mus2 SINE Alu 1 147 0 3 1723 200 86 0 28 chrX 149208880 149208916 -17441380 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1723 508 252 97 0 chrX 149208919 149209074 -17441222 + B3 SINE B2 46 215 -1 3 1723 275 298 30 50 chrX 149209940 149210000 -17440296 - B1F SINE Alu -11 138 83 3 1723 4754 56 3 22 chrX 149210000 149210598 -17439698 - LTRIS_Mus LTR ERV1 0 587 1 3 1723 275 298 30 50 chrX 149210598 149210636 -17439660 - B1F SINE Alu -67 82 42 3 1723 290 229 16 0 chrX 149210703 149210764 -17439532 + PB1 SINE Alu 39 100 -27 3 1723 1150 89 0 0 chrX 149210931 149211077 -17439219 - B1_Mus2 SINE Alu 0 147 2 3 1723 490 252 47 0 chrX 149211080 149211207 -17439089 + B1F SINE Alu 12 144 -5 3 1723 452 198 11 0 chrX 149211244 149211335 -17438961 + B1_Mur2 SINE Alu 32 123 -26 3 1723 220 254 47 16 chrX 149211392 149211456 -17438840 - PB1D9 SINE Alu 0 120 55 4 1723 424 241 113 20 chrX 149211696 149211891 -17438405 + Tigger7 DNA MER2_type 2226 2438 -53 4 1723 972 85 121 12 chrX 149212069 149212235 -17438061 + B2_Mm2 SINE B2 1 184 -11 4 1723 1202 48 14 0 chrX 149212239 149212384 -17437912 - B1_Mus1 SINE Alu -1 147 1 4 1723 25 31 0 0 chrX 149212384 149212416 -17437880 + AT_rich Low_complexity Low_complexity 1 32 0 4 1723 675 73 0 0 chrX 149212578 149212674 -17437622 + L1_Mus2 LINE L1 6471 6566 0 4 1723 252 0 0 0 chrX 149212688 149212716 -17437580 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1723 355 217 21 42 chrX 149213002 149213098 -17437198 + PB1D10 SINE Alu 18 111 -6 4 1723 948 47 0 8 chrX 149213523 149213644 -17436652 + B1_Mus2 SINE Alu 17 137 -10 4 1723 271 0 0 49 chrX 149213644 149213685 -17436611 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1723 307 313 8 50 chrX 149214121 149214242 -17436054 - MurSAT1 Satellite Satellite -4 116 1 4 1723 862 131 31 18 chrX 149214420 149214583 -17435713 + Lx2 LINE L1 6833 6997 0 4 1723 770 221 70 45 chrX 149214598 149214687 -17435609 + B3 SINE B2 3 93 -123 4 1723 3023 67 51 0 chrX 149214687 149215078 -17435218 + RLTR10A LTR ERVK 1 411 0 4 1723 770 221 70 45 chrX 149215078 149215187 -17435109 + B3 SINE B2 94 206 -10 4 1723 809 190 13 26 chrX 149215475 149215626 -17434670 - B1_Mur3 SINE Alu 0 149 1 4 1723 405 288 0 56 chrX 149215740 149215865 -17434431 + PB1D9 SINE Alu 2 119 -1 4 1723 264 30 0 0 chrX 149215884 149215917 -17434379 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1723 491 239 111 0 chrX 149215935 149216052 -17434244 - B1_Mur1 SINE Alu -1 148 19 4 1723 1104 82 7 0 chrX 149217318 149217464 -17432832 - B1_Mus1 SINE Alu 0 148 2 4 1723 414 0 0 0 chrX 149218036 149218082 -17432214 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 1723 208 238 98 24 chrX 149219735 149219817 -17430479 + MER5A DNA MER1_type 7 94 -95 4 1723 23 33 0 0 chrX 149219998 149220028 -17430268 + AT_rich Low_complexity Low_complexity 1 30 0 4 1723 288 239 0 14 chrX 149220936 149221008 -17429288 - PB1D10 SINE Alu -5 112 42 4 1723 279 79 0 0 chrX 149221012 149221050 -17429246 + (TCC)n Simple_repeat Simple_repeat 3 40 0 4 1723 1107 50 43 0 chrX 149221051 149221192 -17429104 - B1_Mus1 SINE Alu 0 148 2 4 1723 256 200 0 0 chrX 149221192 149221237 -17429059 - B1F1 SINE Alu -95 54 10 4 1723 1251 48 0 0 chrX 149221385 149221532 -17428764 + B1_Mus2 SINE Alu 1 147 0 4 1723 246 62 0 0 chrX 149221740 149221772 -17428524 + (ATG)n Simple_repeat Simple_repeat 3 34 0 4 1723 349 253 30 40 chrX 149222505 149222604 -17427692 + PB1D7 SINE Alu 18 115 -5 4 1723 251 216 206 93 chrX 149223553 149223650 -17426646 - B3 SINE B2 -13 203 96 4 1723 653 0 13 0 chrX 149223733 149223810 -17426486 + (CA)n Simple_repeat Simple_repeat 1 78 0 4 1723 207 0 0 0 chrX 149223858 149223881 -17426415 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1723 998 41 0 0 chrX 149223881 149224002 -17426294 - B1_Mus2 SINE Alu -8 139 19 4 1723 405 0 0 0 chrX 149224024 149224069 -17426227 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1723 532 275 31 80 chrX 149224070 149224295 -17426001 + L1MB5 LINE L1 5653 5866 -308 4 1723 325 243 36 27 chrX 149224329 149224439 -17425857 + L1MB5 LINE L1 5996 6106 -78 4 1723 884 101 0 44 chrX 149224449 149224467 -17425829 - B2_Mm1t SINE B2 -20 173 161 4 1723 279 0 0 0 chrX 149224467 149224498 -17425798 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 4 1723 884 101 0 44 chrX 149224498 149224614 -17425682 - B2_Mm1t SINE B2 -33 160 45 4 1723 480 106 0 0 chrX 149224611 149224677 -17425619 - B1_Mus1 SINE Alu -48 100 35 4 1723 1246 68 0 0 chrX 149224687 149224835 -17425461 - B1_Mus1 SINE Alu 0 148 1 4 1723 290 258 15 0 chrX 149225204 149225270 -17425026 + ID4 SINE ID 1 67 -16 4 1723 670 283 78 5 chrX 149225387 149225593 -17424703 + MER58A DNA MER1_type 1 221 -3 4 1723 1588 197 40 176 chrX 149225669 149225829 -17424467 - ORR1D2 LTR MaLR -2 368 218 4 1723 1243 68 0 0 chrX 149225829 149225975 -17424321 + B1_Mus2 SINE Alu 2 147 0 4 1723 1588 197 40 176 chrX 149225975 149226240 -17424056 - ORR1D2 LTR MaLR -153 217 1 4 1723 621 274 125 0 chrX 149226876 149227044 -17423252 - B3 SINE B2 -13 203 15 4 1723 763 187 14 28 chrX 149227193 149227336 -17422960 - B1_Mur2 SINE Alu 0 149 9 4 1723 459 0 0 0 chrX 149227479 149227530 -17422766 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1723 976 135 40 29 chrX 149228121 149228296 -17422000 + B2_Mm2 SINE B2 19 195 0 4 1723 721 236 117 28 chrX 149229030 149229209 -17421087 - B3A SINE B2 -2 196 2 4 1723 24 0 0 0 chrX 149229219 149229243 -17421053 + AT_rich Low_complexity Low_complexity 1 24 0 4 1723 21 82 0 0 chrX 149229469 149229518 -17420778 + AT_rich Low_complexity Low_complexity 1 49 0 4 1723 303 234 0 72 chrX 149229739 149229808 -17420488 + ID4 SINE ID 20 83 0 4 1723 216 0 0 0 chrX 149229825 149229849 -17420447 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 1723 459 107 0 0 chrX 149229849 149229923 -17420373 + (TA)n Simple_repeat Simple_repeat 2 76 0 4 1723 605 127 0 10 chrX 149230462 149230565 -17419731 + (TTTC)n Simple_repeat Simple_repeat 3 104 0 4 1723 526 283 13 33 chrX 149230571 149230721 -17419575 - B1F1 SINE Alu -2 147 1 4 1723 343 267 147 10 chrX 149230810 149230912 -17419384 - B3 SINE B2 -6 210 95 4 1723 336 238 160 47 chrX 149230915 149231021 -17419275 - PB1D9 SINE Alu 0 120 3 4 1723 349 261 8 98 chrX 149231021 149231136 -17419160 + B1_Mur3 SINE Alu 42 145 -4 4 1723 1583 221 64 6 chrX 149231357 149231703 -17418593 - ORR1D1 LTR MaLR -8 366 1 4 1723 559 280 8 23 chrX 149231701 149231829 -17418467 + RSINE1 SINE B4 1 126 -39 4 1723 213 231 0 0 chrX 149231917 149231956 -17418340 + polypurine Low_complexity Low_complexity 4 42 0 4 1723 351 0 0 0 chrX 149232602 149232641 -17417655 + (TGAG)n Simple_repeat Simple_repeat 1 39 0 4 1723 441 0 0 0 chrX 149232768 149232817 -17417479 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1723 1048 227 20 5 chrX 149233324 149233528 -17416768 - B3 SINE B2 -9 207 1 4 1723 299 350 0 0 chrX 149233535 149233615 -17416681 - PB1D10 SINE Alu -7 110 31 4 1723 554 258 40 120 chrX 149233664 149233814 -17416482 + B3A SINE B2 57 198 0 4 1723 363 23 0 0 chrX 149234150 149234194 -17416102 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1723 208 119 48 0 chrX 149234252 149234294 -17416002 + T-rich Low_complexity Low_complexity 5 48 0 4 1723 197 65 32 0 chrX 149234299 149234330 -17415966 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 4 1723 1149 102 0 13 chrX 149234336 149234485 -17415811 - B1_Mus1 SINE Alu 0 148 2 4 1723 3622 76 10 41 chrX 149234486 149234979 -17415317 - Lx LINE L1 -16 6638 6161 4 1723 342 0 0 0 chrX 149236026 149236064 -17414232 + (TC)n Simple_repeat Simple_repeat 1 38 0 4 1723 429 20 0 0 chrX 149236064 149236113 -17414183 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1723 660 316 24 3 chrX 149236118 149236303 -17413993 - ID_B1 SINE B4 -99 193 2 4 1723 375 232 114 0 chrX 149236327 149236488 -17413808 - L1MB5 LINE L1 -212 5956 5771 4 1723 1282 41 0 13 chrX 149236677 149236826 -17413470 + B1_Mus2 SINE Alu 1 147 0 4 1723 714 154 21 29 chrX 149236856 149236996 -17413300 - B1_Mur3 SINE Alu 0 149 11 4 1723 337 280 27 0 chrX 149237097 149237172 -17413124 + ID4 SINE ID 3 79 -4 4 1723 1421 97 5 5 chrX 149237655 149237841 -17412455 - B2_Mm1a SINE B2 -5 188 3 4 1723 184 219 90 64 chrX 149239806 149239884 -17410412 + L3 LINE CR1 9 88 -4401 4 1723 561 167 0 0 chrX 149239971 149240073 -17410223 + CT-rich Low_complexity Low_complexity 52 153 0 4 1723 310 167 60 15 chrX 149240696 149240743 -17409553 - ORR1A2 LTR MaLR 0 326 276 4 1723 1386 93 22 0 chrX 149240743 149240926 -17409370 - B2_Mm1t SINE B2 -3 190 4 4 1723 310 167 60 15 chrX 149240926 149240945 -17409351 - ORR1A2 LTR MaLR -51 275 257 4 1723 197 130 43 0 chrX 149240949 149240995 -17409301 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 4 1723 7219 46 10 1 chrX 149240999 149241885 -17408411 - L1Md_F2 LINE L1 0 6582 5689 4 1723 2112 93 7 0 chrX 149241885 149242176 -17408120 - ORR1A2 LTR MaLR -34 293 1 4 1723 592 208 62 23 chrX 149242254 149242382 -17407914 - B1_Mur2 SINE Alu -7 142 10 4 1723 282 302 81 67 chrX 149242382 149242400 -17407896 - ID_B1 SINE B4 -4 217 70 4 1723 693 300 57 5 chrX 149242518 149242729 -17407567 + ID_B1 SINE B4 1 222 -2 4 1723 1734 37 0 0 chrX 149243468 149243659 -17406637 - B2_Mm1t SINE B2 -1 192 2 4 1723 471 289 54 8 chrX 149243703 149243832 -17406464 + B1F SINE Alu 1 135 -14 4 1723 517 148 229 15 chrX 149243833 149243990 -17406306 - B2_Mm2 SINE B2 -7 188 1 4 1723 1225 130 11 6 chrX 149244005 149244183 -17406113 - B2_Mm1t SINE B2 -14 179 1 4 1723 211 163 41 0 chrX 149244205 149244254 -17406042 + A-rich Low_complexity Low_complexity 3 53 0 4 1723 2955 127 14 56 chrX 149244254 149244306 -17405990 - L1_Mur2 LINE L1 -44 5833 5792 4 1723 1238 102 32 0 chrX 149244306 149244334 -17405962 - B2_Mm1t SINE B2 0 193 162 4 1723 459 0 0 0 chrX 149244334 149244385 -17405911 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 4 1723 1238 102 32 0 chrX 149244385 149244542 -17405754 - B2_Mm1t SINE B2 -32 161 3 4 1723 2955 127 14 56 chrX 149244542 149244991 -17405305 - L1_Mur2 LINE L1 -86 5791 5353 4 1723 3733 142 13 5 chrX 149244977 149245590 -17404706 + L1_Mur2 LINE L1 4758 5414 -2468 4 1723 482 231 14 95 chrX 149246743 149246891 -17403405 + ID_B1 SINE B4 76 211 -13 4 1723 888 167 0 7 chrX 149246759 149246895 -17403401 + B1_Mur3 SINE Alu 6 140 -9 4 1723 186 43 0 0 chrX 149246895 149246918 -17403378 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 4 1723 207 0 0 0 chrX 149246930 149246953 -17403343 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1723 732 182 103 0 chrX 149247025 149247151 -17403145 - B1_Mur2 SINE Alu -9 140 2 5 1723 21 0 0 0 chrX 149248400 149248421 -17401875 + AT_rich Low_complexity Low_complexity 1 21 0 5 1723 808 43 90 49 chrX 149248426 149248548 -17401748 - B1_Mm SINE Alu 0 147 21 5 1723 3389 58 5 2 chrX 149249000 149249397 -17400899 + MTB LTR MaLR 1 398 -2 5 1723 23 68 0 0 chrX 149249428 149249472 -17400824 + AT_rich Low_complexity Low_complexity 1 44 0 5 1723 2476 126 3 42 chrX 149249481 149249861 -17400435 + RLTR8 LTR ERVK 1 365 0 5 1723 453 234 0 53 chrX 149249914 149250027 -17400269 - ORR1C2 LTR MaLR -277 107 1 5 1723 282 178 0 0 chrX 149250027 149250072 -17400224 + ORR1C1-int LTR MaLR 925 969 -540 5 1723 1427 146 147 13 chrX 149250065 149250377 -17399919 + ORR1C1-int LTR MaLR 1156 1509 0 5 1723 2337 160 33 3 chrX 149250378 149250742 -17399554 + ORR1C1 LTR MaLR 2 376 -2 5 1723 1940 62 0 8 chrX 149250868 149251110 -17399186 - L1_Mus2 LINE L1 0 6566 6327 5 1723 2566 127 37 5 chrX 149251408 149251788 -17398508 + ORR1B1 LTR MaLR 1 392 -2 5 1723 1866 239 101 22 chrX 149251862 149252397 -17397899 - Lx7 LINE L1 -1086 6610 6034 5 1723 876 283 14 9 chrX 149252443 149252657 -17397639 - B3 SINE B2 -1 215 1 5 1723 2659 164 62 58 chrX 149252666 149253197 -17397099 + MT2A LTR ERVL 1 533 0 5 1723 329 331 44 13 chrX 149253696 149253855 -17396441 + MER20 DNA MER1_type 55 218 -1 5 1723 1014 111 69 17 chrX 149254132 149254306 -17395990 - MT2A LTR ERVL -350 183 1 5 1723 468 0 0 0 chrX 149254336 149254388 -17395908 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1723 778 236 7 7 chrX 149254388 149254529 -17395767 - B1_Mur1 SINE Alu -8 141 1 5 1723 2536 60 9 3 chrX 149255045 149255360 -17394936 - L1_Mus2 LINE L1 0 6566 6250 5 1723 29 70 0 0 chrX 149255459 149255516 -17394780 + AT_rich Low_complexity Low_complexity 1 57 0 5 1723 7285 89 25 32 chrX 149255516 149256329 -17393967 - Lx LINE L1 -1 6653 5842 5 1723 1227 68 0 0 chrX 149256329 149256475 -17393821 - B1_Mus2 SINE Alu 0 147 2 5 1723 7285 113 33 19 chrX 149256475 149257084 -17393212 - Lx LINE L1 -42 5841 5215 5 1723 365 271 0 0 chrX 149258155 149258240 -17392056 - Tigger5 DNA MER2_type -8 2398 2314 5 1723 388 257 7 12 chrX 149258287 149258392 -17391904 + B1_Mur3 SINE Alu 18 149 0 5 1723 7247 34 5 1 chrX 149258414 149259231 -17391065 - L1Md_F3 LINE L1 -2 6582 5763 5 1723 346 304 82 87 chrX 149259355 149259639 -17390657 + ORR1E LTR MaLR 86 370 0 5 1723 4470 96 38 8 chrX 149259713 149260341 -17389955 - L1_Mus3 LINE L1 -7 6631 5985 5 1723 1935 225 0 17 chrX 149260424 149260785 -17389511 - ORR1D1 LTR MaLR 0 374 20 5 1723 318 26 0 0 chrX 149260785 149260824 -17389472 + (TC)n Simple_repeat Simple_repeat 2 40 0 5 1723 325 133 366 30 chrX 149260828 149260929 -17389367 - B2_Mm2 SINE B2 -14 181 47 5 1723 1350 96 11 6 chrX 149260970 149261148 -17389148 - B2_Mm1t SINE B2 -14 179 1 5 1723 450 263 56 63 chrX 149261175 149261301 -17388995 - B1_Mur1 SINE Alu -15 134 10 5 1723 180 356 47 47 chrX 149261426 149261532 -17388764 + MIR3 SINE MIR 91 196 -12 5 1723 6616 109 24 23 chrX 149261554 149262526 -17387770 + Lx2 LINE L1 6006 6978 -19 5 1723 216 97 0 0 chrX 149262529 149262560 -17387736 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 1723 180 0 0 0 chrX 149262560 149262579 -17387717 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 1723 706 210 32 0 chrX 149262592 149262716 -17387580 + B1_Mur2 SINE Alu 1 128 -21 5 1723 390 42 0 0 chrX 149262717 149262765 -17387531 + (CAAAC)n Simple_repeat Simple_repeat 2 49 0 5 1723 252 77 0 0 chrX 149262896 149262935 -17387361 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1723 1402 45 11 6 chrX 149263351 149263530 -17386766 + L1_Mus3 LINE L1 6455 6634 -4 5 1723 1599 22 56 0 chrX 149263567 149263747 -17386549 - B2_Mm1a SINE B2 -2 191 2 5 1723 1050 167 99 43 chrX 149263747 149263951 -17386345 - MusHAL1 LINE L1 -907 1805 1588 5 1723 4584 130 19 13 chrX 149263951 149264637 -17385659 + RLTR17 LTR ERVK 3 692 0 5 1723 1050 167 99 43 chrX 149264637 149264664 -17385632 - MusHAL1 LINE L1 -1125 1587 1561 5 1723 237 162 0 0 chrX 149265177 149265214 -17385082 - ID_B1 SINE B4 -7 217 181 5 1723 243 231 138 25 chrX 149265264 149265344 -17384952 - RLTR25B LTR ERVK -498 530 442 5 1723 574 204 0 0 chrX 149265286 149265384 -17384912 - B1_Mur2 SINE Alu -51 98 1 5 1723 209 265 205 0 chrX 149266303 149266386 -17383910 + MIR SINE MIR 48 147 -115 5 1723 3189 130 70 11 chrX 149266663 149266753 -17383543 - RLTR20B3 LTR ERVK 0 577 485 5 1723 423 0 0 0 chrX 149266753 149266800 -17383496 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1723 3189 130 70 11 chrX 149266800 149267254 -17383042 - RLTR20B3 LTR ERVK -93 484 2 5 1723 599 109 0 10 chrX 149267492 149267594 -17382702 + L1_Mus4 LINE L1 6535 6635 -1 5 1723 243 0 0 0 chrX 149268026 149268053 -17382243 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1723 501 317 82 100 chrX 149268604 149268683 -17381613 + Charlie12 DNA MER1_type 2593 2664 -209 5 1723 1254 54 7 0 chrX 149268683 149268830 -17381466 - B1_Mus1 SINE Alu 0 148 1 5 1723 501 317 82 100 chrX 149268830 149269020 -17381276 + Charlie12 DNA MER1_type 2665 2857 -16 5 1723 1292 48 0 0 chrX 149269342 149269488 -17380808 - B1_Mus2 SINE Alu 0 147 2 5 1723 340 125 36 0 chrX 149269731 149269787 -17380509 + 4.5SRNA scRNA scRNA 14 71 -23 5 1723 1018 83 0 0 chrX 149269783 149269916 -17380380 + B1_Mus1 SINE Alu 10 142 -6 5 1723 306 0 0 0 chrX 149269917 149269951 -17380345 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1723 21 36 0 0 chrX 149269993 149270021 -17380275 + AT_rich Low_complexity Low_complexity 1 28 0 5 1723 967 280 14 0 chrX 149270210 149270417 -17379879 + B3 SINE B2 5 214 -2 5 1723 3866 58 0 9 chrX 149270446 149270900 -17379396 - L1_Mus1 LINE L1 0 6567 6118 5 1723 694 236 107 0 chrX 149270901 149271099 -17379197 + Lx9 LINE L1 7354 7575 -69 5 1723 404 62 16 0 chrX 149271099 149271163 -17379133 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 5 1723 694 236 107 0 chrX 149271163 149271206 -17379090 + Lx9 LINE L1 7576 7620 -24 5 1723 392 275 24 30 chrX 149271272 149271437 -17378859 + L1_Rod LINE L1 2467 2630 -3217 5 1723 992 304 37 32 chrX 149271447 149271843 -17378453 + L1_Rod LINE L1 2848 3241 -2606 5 1723 525 16 0 0 chrX 149271843 149271905 -17378391 + (GA)n Simple_repeat Simple_repeat 1 62 0 5 1723 992 304 37 32 chrX 149271905 149272096 -17378200 + L1_Rod LINE L1 3242 3438 -2409 5 1723 648 264 62 48 chrX 149272105 149272396 -17377900 + L1_Mur3 LINE L1 3508 3802 -2078 5 1723 239 302 92 26 chrX 149272885 149273038 -17377258 + RMER5 LTR ERV1 113 275 -259 5 1723 33080 35 1 0 chrX 149273195 149277796 -17372500 - L1Md_F2 LINE L1 0 6582 1979 5 1723 1273 122 49 0 chrX 149277781 149277986 -17372310 - L1Md_F2 LINE L1 -6302 422 208 5 1723 331 21 0 0 chrX 149279988 149280035 -17370261 + L1Md_T LINE L1 6534 6580 -2 5 1723 2527 123 0 0 chrX 149280035 149280418 -17369878 - L1Md_F LINE L1 -3763 2120 1738 5 1723 4302 127 74 1 chrX 149280412 149281090 -17369206 - L1Md_F LINE L1 -5524 1092 366 5 1723 20987 167 17 17 chrX 149281071 149282643 -17367653 - L1_Mur1 LINE L1 -406 5480 3939 5 1723 1078 82 0 39 chrX 149282643 149282796 -17367500 - B1_Mus2 SINE Alu 0 147 1 5 1723 20987 167 17 17 chrX 149282796 149285217 -17365079 - L1_Mur1 LINE L1 -1948 3938 1485 5 1723 7285 148 18 56 chrX 149285225 149287719 -17362577 - L1_Mus2 LINE L1 0 6566 4261 5 1723 4362 141 10 0 chrX 149287720 149288428 -17361868 + L1_Mur2 LINE L1 3647 4361 -1516 5 215 3009 327 69 48 chrX 149288428 149291210 -17359086 + MuLV-int LTR ERV1 2463 5322 -2456 5 1724 359 295 0 0 chrX 149291415 149291510 -17358786 + MuLV-int LTR ERV1 5510 5604 -2002 5 1724 3479 164 116 25 chrX 149294933 149295801 -17354495 + ORR1A3-int LTR MaLR 210 1156 -807 5 1724 2528 80 3 3 chrX 149295801 149296128 -17354168 + L1_Mm LINE L1 5348 5674 -209 5 1724 2936 6 0 0 chrX 149296128 149296450 -17353846 + RLTRETN_Mm LTR ERVK 1 322 0 5 1724 30122 15 1 4 chrX 149296450 149299855 -17350441 + MMETn-int LTR ERVK 1 3394 -1450 5 1724 7321 61 0 2 chrX 149299855 149300754 -17349542 + L1_Mus1 LINE L1 5669 6565 -2 5 1724 2960 134 14 2 chrX 149300769 149301278 -17349018 + ORR1A3-int LTR MaLR 1152 1666 -297 5 1724 272 316 58 32 chrX 149301604 149301758 -17348538 + LTRIS2 LTR ERV1 354 511 -53 5 1724 221 88 0 0 chrX 149302518 149302552 -17347744 + B3 SINE B2 2 35 -181 5 1724 2248 126 158 29 chrX 149302557 149303046 -17347250 + RMER17B LTR ERVK 303 854 -104 5 1724 286 139 0 0 chrX 149303046 149303089 -17347207 + B2_Mm2 SINE B2 45 87 -108 5 1724 293 235 64 73 chrX 149303842 149303952 -17346344 + MuRRS4-int LTR ERV1 1705 1813 -5743 5 1724 2946 180 0 29 chrX 149303969 149304514 -17345782 + L1VL4 LINE L1 162 690 -5612 5 1724 570 206 0 0 chrX 149304514 149304616 -17345680 - RMER17B LTR ERVK 0 958 857 5 1724 22147 107 6 2 chrX 149304616 149306881 -17343415 + L1_Mus1 LINE L1 2670 4947 -936 5 1724 1940 91 25 7 chrX 149306881 149307159 -17343137 - L1_Mus1 LINE L1 -3 6564 6282 5 1724 22147 82 5 3 chrX 149307159 149308775 -17341521 + L1_Mus1 LINE L1 4948 6566 -1 5 1724 1447 353 20 22 chrX 149308901 149309704 -17340592 + MuRRS4-int LTR ERV1 2318 3118 -1945 5 1724 2227 93 128 0 chrX 149310016 149310414 -17339882 - RLTR47_MM LTR ERV1 -83 449 1 5 1724 1048 298 35 39 chrX 149310414 149310896 -17339400 - RLTR6-int LTR ERV1 -57 7721 7328 5 1724 271 298 43 62 chrX 149311157 149311318 -17338978 - MMERGLN-int LTR ERV1 -1961 5595 5438 5 1724 1092 270 71 18 chrX 149311424 149311760 -17338536 + MuRRS4-int LTR ERV1 3555 3908 -1155 5 1724 5631 19 0 0 chrX 149311760 149312399 -17337897 + L1Md_T LINE L1 4948 5586 -297 5 1724 8640 31 0 0 chrX 149312399 149313395 -17336901 + L1Md_T LINE L1 5587 6582 0 5 1724 401 243 84 0 chrX 149313402 149313509 -17336787 + MuRRS4-int LTR ERV1 3899 4014 -1049 5 1724 338 259 12 0 chrX 149313714 149313795 -17336501 + RLTR4_MM-int LTR ERV1 5490 5571 -2030 5 1724 317 288 51 36 chrX 149314876 149315013 -17335283 + RMER17C-int LTR ERVK 362 500 -2738 5 1724 942 299 47 26 chrX 149315031 149315374 -17334922 + RodERV21-int LTR ERV1 729 1078 -3913 5 1724 1193 320 25 30 chrX 149315467 149315937 -17334359 + RodERV21-int LTR ERV1 1114 1581 -3410 5 1724 881 80 91 1 chrX 149315937 149316083 -17334213 + BGLII_Mus LTR ERVK 1 164 -281 5 1724 5529 75 0 17 chrX 149316083 149316668 -17333628 + L1VL2 LINE L1 304 879 -5456 5 1724 959 107 20 54 chrX 149316668 149316816 -17333480 + B1_Mus1 SINE Alu 1 143 -5 5 1724 6398 62 21 7 chrX 149316816 149317752 -17332544 + L1VL2 LINE L1 880 1826 -1789 5 1724 300 303 0 0 chrX 149317896 149317985 -17332311 - PB1D10 SINE Alu -2 115 27 5 1724 22949 102 6 82 chrX 149318353 149320884 -17329412 - L1_Mus2 LINE L1 -1 6565 4192 5 1724 391 179 0 128 chrX 149320884 149320993 -17329303 - RLTR9A LTR ERVK 0 368 274 5 1724 22949 102 6 82 chrX 149320993 149323109 -17327187 - L1_Mus2 LINE L1 -1 4191 2205 5 1724 2762 41 22 0 chrX 149323121 149323441 -17326855 + IAPLTR2b LTR ERVK 1 327 0 5 1724 3551 99 27 33 chrX 149323464 149324320 -17325976 + IAPEz-int LTR ERVK 10 662 -5819 5 1724 2699 70 0 3 chrX 149324320 149324663 -17325633 + IAPEz-int LTR ERVK 1359 1700 -4781 5 1724 6521 54 13 12 chrX 149324658 149325486 -17324810 + IAPEz-int LTR ERVK 5653 6481 0 5 1724 2402 26 23 0 chrX 149325486 149325790 -17324506 + IAPLTR2b LTR ERVK 1 311 -16 5 1724 322 0 0 0 chrX 149325787 149325827 -17324469 - IAPLTR2b LTR ERVK -287 40 1 6 1724 682 322 0 4 chrX 149325829 149326085 -17324211 - MYSERV6-int LTR ERVK -8253 706 452 6 1724 2912 84 37 0 chrX 149326829 149327233 -17323063 + BGLII LTR ERVK 1 419 -2 6 1724 200 171 56 14 chrX 149327342 149327413 -17322883 + (TA)n Simple_repeat Simple_repeat 2 75 0 6 1724 1941 161 75 14 chrX 149328025 149328441 -17321855 - BGLII_B LTR ERVK 0 441 1 6 1724 685 231 0 20 chrX 149328552 149328702 -17321594 + B1_Mur2 SINE Alu 1 147 -2 6 1724 3052 14 42 3 chrX 149329233 149329586 -17320710 + IAPLTR1_Mm LTR ERVK 1 367 0 6 1724 39154 19 9 1 chrX 149329586 149335961 -17314335 + IAPEz-int LTR ERVK 8 6481 0 6 1724 3205 14 42 3 chrX 149335961 149336314 -17313982 + IAPLTR1_Mm LTR ERVK 1 367 0 6 1724 4668 116 78 7 chrX 149337974 149338662 -17311634 - RMER19A LTR ERVK 0 737 1 6 1724 4433 21 13 0 chrX 149338825 149339301 -17310995 + LTRIS_Mm LTR ERV1 1 482 0 6 1724 210 143 0 0 chrX 149339706 149339741 -17310555 + (TTA)n Simple_repeat Simple_repeat 2 36 0 6 1724 4672 158 43 19 chrX 149339750 149340154 -17310142 - Lx3B LINE L1 -7 6966 6553 6 1724 1256 216 66 105 chrX 149340154 149340563 -17309733 + RLTR9C LTR ERVK 1 393 0 6 1724 4672 158 43 19 chrX 149340563 149340956 -17309340 - Lx3B LINE L1 -421 6552 6150 6 1724 785 232 87 11 chrX 149340977 149341160 -17309136 + RLTR1D LTR ERV1 50 246 -359 6 1724 1874 201 45 45 chrX 149341160 149341583 -17308713 + RLTR1D LTR ERV1 183 605 0 6 1724 9129 121 33 2 chrX 149341583 149343261 -17307035 - Lx3B LINE L1 -820 6153 4428 6 1724 23 33 0 0 chrX 149343262 149343292 -17307004 + AT_rich Low_complexity Low_complexity 1 30 0 6 1724 267 31 0 0 chrX 149344014 149344046 -17306250 + (T)n Simple_repeat Simple_repeat 1 32 0 6 1724 15799 105 2 3 chrX 149344868 149347154 -17303142 - Lx3B LINE L1 -1444 4439 2156 6 1724 7703 89 8 2 chrX 149347146 149348824 -17301472 + L1_Mus1 LINE L1 4881 6567 0 6 1724 6643 128 27 29 chrX 149348839 149350621 -17299675 - Lx3B LINE L1 -3715 2168 390 6 1724 872 191 0 20 chrX 149351364 149351514 -17298782 - B1_Mur2 SINE Alu -2 147 1 6 1724 1213 44 0 0 chrX 149351834 149351970 -17298326 + B1_Mm SINE Alu 1 136 -11 6 1724 387 0 0 0 chrX 149351970 149352013 -17298283 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 6 1724 198 0 0 0 chrX 149353602 149353624 -17296672 + (TGG)n Simple_repeat Simple_repeat 1 22 0 6 1724 505 281 59 109 chrX 149354165 149354385 -17295911 - B3 SINE B2 -5 211 3 6 1724 1845 69 214 7 chrX 149354892 149355200 -17295096 - RLTR10 LTR ERVK -18 372 1 6 1724 231 355 18 29 chrX 149355721 149355892 -17294404 + Cheshire DNA MER1_type 170 338 -2082 6 1724 517 133 245 0 chrX 149356193 149356291 -17294005 + RMER2 LTR ERV1 25 146 -421 6 1724 234 292 66 56 chrX 149356410 149356472 -17293824 + L1MD LINE L1 2195 2258 -3888 6 1724 3070 114 171 18 chrX 149356472 149356514 -17293782 - RMER2 LTR ERV1 0 567 533 6 1724 243 0 0 0 chrX 149356514 149356541 -17293755 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1724 3070 114 171 18 chrX 149356541 149356990 -17293306 - RMER2 LTR ERV1 -35 532 2 6 1724 234 292 66 56 chrX 149356990 149357123 -17293173 + L1MD LINE L1 2259 2392 -3754 6 1724 1112 285 64 86 chrX 149357484 149357891 -17292405 + MTD LTR MaLR 1 398 -21 6 1724 1658 35 9 9 chrX 149358076 149358303 -17291993 - 7SK RNA RNA -104 227 1 6 1724 336 77 0 44 chrX 149359011 149359079 -17291217 + (TTTTTG)n Simple_repeat Simple_repeat 2 66 0 6 1724 599 254 90 6 chrX 149359230 149359396 -17290900 - ORR1E LTR MaLR -169 190 11 6 1724 399 258 73 36 chrX 149359388 149359525 -17290771 + MTE2b-int LTR MaLR 1286 1427 -153 6 1724 369 0 0 0 chrX 149359525 149359566 -17290730 + (TC)n Simple_repeat Simple_repeat 2 42 0 6 1724 189 0 0 0 chrX 149359566 149359586 -17290710 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1724 716 273 29 6 chrX 149359599 149359772 -17290524 - B3 SINE B2 -38 178 2 6 1724 272 266 68 18 chrX 149359776 149359916 -17290380 + MTE2b-int LTR MaLR 1415 1490 -90 6 1724 1213 256 66 57 chrX 149359918 149360250 -17290046 + MTE2b LTR MaLR 1 335 -44 6 1724 625 266 16 0 chrX 149360288 149360412 -17289884 - RSINE1 SINE B4 -19 146 21 6 1724 370 289 8 34 chrX 149360461 149360579 -17289717 - RSINE1 SINE B4 -12 153 39 6 1724 981 289 67 72 chrX 149360644 149361314 -17288982 + L1MA9 LINE L1 5624 6290 -22 6 1724 369 0 0 0 chrX 149361587 149361628 -17288668 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1724 862 337 75 9 chrX 149362167 149362846 -17287450 + L1M2 LINE L1 2270 2993 -3150 6 1724 415 333 14 0 chrX 149362846 149362984 -17287312 + ID_B1 SINE B4 81 220 -4 6 1724 314 203 0 28 chrX 149362991 149363062 -17287234 + L1M2 LINE L1 2989 3057 -3086 6 1724 267 268 76 30 chrX 149363163 149363294 -17287002 + L1_Mm LINE L1 3029 3165 -2718 6 1724 2394 62 7 0 chrX 149363296 149363603 -17286693 - MTA_Mm LTR MaLR -87 309 1 6 1724 9042 48 24 2 chrX 149363603 149364677 -17285619 - MTA_Mm-int LTR MaLR 0 1098 1 6 1724 3569 50 0 0 chrX 149364677 149365073 -17285223 - MTA_Mm LTR MaLR 0 396 1 6 1724 447 270 109 31 chrX 149365075 149365331 -17284965 + L1_Rod LINE L1 3996 4271 -1576 6 1724 22 0 0 0 chrX 149365355 149365377 -17284919 + AT_rich Low_complexity Low_complexity 1 22 0 6 1724 249 128 0 0 chrX 149365478 149365525 -17284771 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 6 1724 444 37 0 0 chrX 149365715 149365769 -17284527 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 1724 2719 278 38 19 chrX 149365835 149366628 -17283668 - Lx9 LINE L1 -594 7050 6243 6 1724 225 205 0 114 chrX 149366628 149366716 -17283580 - Lx9 LINE L1 -1829 5815 5738 6 1724 231 266 86 25 chrX 149366726 149366888 -17283408 + (CATGT)n Simple_repeat Simple_repeat 2 173 0 6 1724 1105 209 29 0 chrX 149367160 149367370 -17282926 + B3 SINE B2 1 216 0 6 1724 32 57 0 0 chrX 149368056 149368109 -17282187 + AT_rich Low_complexity Low_complexity 1 53 0 6 1724 228 135 0 0 chrX 149368414 149368451 -17281845 + (T)n Simple_repeat Simple_repeat 1 37 0 6 1724 1088 95 7 7 chrX 149368451 149368599 -17281697 - B1_Mus1 SINE Alu 0 148 1 6 1724 1070 202 15 15 chrX 149368636 149368842 -17281454 + MTD LTR MaLR 5 210 -209 6 1724 2083 140 19 3 chrX 149368842 149369165 -17281131 - Lx4B LINE L1 -317 6741 6414 6 1724 6000 134 25 21 chrX 149369193 149370183 -17280113 - Lx2 LINE L1 -104 6893 5900 6 1724 843 108 0 8 chrX 149370180 149370302 -17279994 + Lx2 LINE L1 5737 5857 -1140 6 1724 973 235 15 10 chrX 149371273 149371479 -17278817 - B3 SINE B2 -9 207 1 6 1724 2065 289 97 28 chrX 149371488 149372420 -17277876 - L1MA6 LINE L1 -2 6298 5302 6 1724 243 0 0 0 chrX 149372420 149372447 -17277849 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1724 2065 279 39 81 chrX 149372447 149372916 -17277380 - L1MA6 LINE L1 -999 5301 4854 6 1724 1348 254 84 6 chrX 149372930 149373262 -17277034 - MTE2b LTR MaLR -4 375 18 6 1724 5215 52 11 0 chrX 149373279 149373915 -17276381 - Lx3_Mus LINE L1 -69 6940 6298 6 1724 679 288 111 12 chrX 149373933 149374346 -17275950 - L1MA6 LINE L1 -1297 4846 4386 6 1724 236 196 17 35 chrX 149374650 149374708 -17275588 + L1MA4 LINE L1 5555 5611 -701 6 1724 911 263 29 11 chrX 149374717 149375027 -17275269 + Lx8 LINE L1 5620 5976 -1668 6 1724 513 317 0 0 chrX 149375133 149375253 -17275043 - B1_Mur3 SINE Alu -28 121 2 6 1724 1091 232 14 5 chrX 149375422 149375630 -17274666 + B3 SINE B2 2 211 -5 6 1724 2619 296 84 63 chrX 149375666 149376807 -17273489 + Lx8 LINE L1 6198 7362 -111 6 1724 286 384 62 0 chrX 149377903 149378015 -17272281 - PB1 SINE Alu -8 119 1 6 1724 578 344 30 49 chrX 149378384 149378650 -17271646 - MLT1F1 LTR MaLR -5 564 304 6 1724 227 236 36 0 chrX 149378683 149378738 -17271558 + GA-rich Low_complexity Low_complexity 3 59 0 6 1724 228 153 265 0 chrX 149378748 149378809 -17271487 + PB1D10 SINE Alu 23 99 -21 6 1724 553 0 0 128 chrX 149378810 149379013 -17271283 + (GGGAGA)n Simple_repeat Simple_repeat 1 177 0 6 1724 607 209 33 26 chrX 149379050 149379202 -17271094 - L1M1 LINE L1 -711 5592 5440 6 1724 543 229 35 0 chrX 149379196 149379340 -17270956 + L1MA4 LINE L1 5785 5933 -367 6 1724 222 294 0 14 chrX 149380119 149380218 -17270078 + (TATATG)n Simple_repeat Simple_repeat 1 97 0 6 1724 350 325 119 25 chrX 149380530 149380732 -17269564 - MIRb SINE MIR -47 221 1 6 1724 327 345 85 9 chrX 149381966 149382035 -17268261 - L1M4c LINE L1 -3616 2766 2697 6 1724 450 0 0 0 chrX 149382035 149382085 -17268211 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1724 327 345 85 9 chrX 149382085 149382226 -17268070 - L1M4c LINE L1 -3686 2696 2540 6 1724 259 297 110 0 chrX 149382379 149382497 -17267799 - Lx8 LINE L1 -145 7328 7198 6 1724 254 278 27 14 chrX 149382502 149382575 -17267721 + MTD LTR MaLR 6 79 -340 6 1724 481 284 132 12 chrX 149382951 149383208 -17267088 - L1M4c LINE L1 -4651 1733 1446 6 1724 663 296 6 30 chrX 149383283 149383450 -17266846 - RSINE1 SINE B4 -1 164 2 6 1724 581 231 480 36 chrX 149383643 149383896 -17266400 - Lx8 LINE L1 -3 7470 7105 6 1724 783 350 41 52 chrX 149383896 149384355 -17265941 + MLT1D LTR MaLR 52 505 0 6 1724 231 229 47 24 chrX 149384357 149384442 -17265854 + L1M5 LINE L1 4304 4390 -1756 6 1724 2943 152 30 10 chrX 149384636 149385089 -17265207 + RLTR20B2 LTR ERVK 1 464 -96 6 1724 387 0 0 0 chrX 149385089 149385132 -17265164 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1724 2943 152 30 10 chrX 149385132 149385176 -17265120 + RLTR20B2 LTR ERVK 465 508 -52 6 1724 53 17 0 0 chrX 149385549 149385609 -17264687 + AT_rich Low_complexity Low_complexity 1 60 0 6 1724 280 282 157 10 chrX 149385702 149385899 -17264397 - Lx9 LINE L1 -18 7626 7401 6 1724 6509 88 104 1 chrX 149385897 149386902 -17263394 - L1_Mus3 LINE L1 -1 6637 5529 6 1724 7963 84 3 7 chrX 149386902 149387977 -17262319 + L1_Mus3 LINE L1 4461 5530 -353 6 1724 3171 55 0 8 chrX 149387998 149388384 -17261912 - L1Md_F2 LINE L1 0 6582 6200 6 1724 727 194 62 21 chrX 149388557 149388805 -17261491 + ORR1D2-int LTR MaLR 1189 1557 -23 6 1724 741 268 37 14 chrX 149388879 149389095 -17261201 - L1_Mur3 LINE L1 -692 5188 4968 6 1724 4635 228 47 39 chrX 149389566 149390955 -17259341 - L1_Mur3 LINE L1 -1046 4834 3434 6 1724 2143 153 42 173 chrX 149390955 149391601 -17258695 + RLTR31_Mm LTR ERVK 1 561 0 6 1724 4635 228 47 39 chrX 149391601 149391637 -17258659 - L1_Mur3 LINE L1 -2447 3433 3398 6 1724 417 239 22 82 chrX 149391626 149391902 -17258394 - L1M2 LINE L1 -861 5439 5173 6 1724 2155 142 37 16 chrX 149391902 149392280 -17258016 + MTB_Mm LTR MaLR 3 388 -19 6 1724 295 302 16 0 chrX 149392303 149392432 -17257864 - L1M2 LINE L1 -993 5150 5020 6 1724 349 302 45 62 chrX 149392435 149392577 -17257719 + L1MA6 LINE L1 5973 6110 -190 6 1724 3260 46 13 0 chrX 149392577 149392968 -17257328 - MTA_Mm LTR MaLR 0 396 1 6 1724 349 284 57 57 chrX 149392968 149393030 -17257266 + L1MA6 LINE L1 6111 6176 -124 6 1724 718 264 9 8 chrX 149393098 149393337 -17256959 - Lx7 LINE L1 -1781 5915 5657 6 1724 306 194 0 0 chrX 149393416 149393478 -17256818 + (TG)n Simple_repeat Simple_repeat 2 63 0 6 1724 744 226 0 0 chrX 149393578 149393715 -17256581 + B1_Mur1 SINE Alu 1 137 -12 6 1724 336 264 24 103 chrX 149393790 149393908 -17256388 + L1MA6 LINE L1 6078 6201 -99 6 1724 2517 147 21 21 chrX 149393908 149394326 -17255970 - MTC LTR MaLR 0 421 4 7 1724 336 220 17 116 chrX 149394326 149394404 -17255892 + L1MA6 LINE L1 6195 6262 -29 6 1724 1197 237 98 52 chrX 149394743 149394904 -17255392 - RMER5 LTR ERV1 0 534 375 7 1724 823 180 0 28 chrX 149394904 149395047 -17255249 + B1_Mur1 SINE Alu 5 143 -6 7 1724 1197 237 98 52 chrX 149395047 149395365 -17254931 - RMER5 LTR ERV1 -160 374 33 7 1724 472 261 0 0 chrX 149395693 149395804 -17254492 + B1_Mur2 SINE Alu 26 136 -13 7 1724 276 262 21 0 chrX 149395831 149395972 -17254324 + GA-rich Low_complexity Low_complexity 1 144 0 7 1724 237 154 0 0 chrX 149397581 149397620 -17252676 + L1_Mm LINE L1 5335 5373 -510 7 1724 3235 8 0 49 chrX 149397620 149398006 -17252290 - IAPLTR1_Mm LTR ERVK 0 367 1 7 1724 26768 16 1 2 chrX 149398006 149400964 -17249332 - IAPEz-int LTR ERVK 0 6481 3525 7 1724 936 88 24 0 chrX 149400964 149401089 -17249207 - IAPEz-int LTR ERVK -2770 4910 4783 7 1724 1784 119 4 19 chrX 149401084 149401350 -17248946 - IAPEz-int LTR ERVK -5183 2497 2236 7 1724 454 66 0 32 chrX 149401339 149401402 -17248894 - IAPEz-int LTR ERVK -5062 1419 1359 7 1724 3493 79 13 14 chrX 149401402 149402131 -17248165 - IAPEz-int LTR ERVK -5819 662 8 7 1724 3235 8 0 49 chrX 149402131 149402517 -17247779 - IAPLTR1_Mm LTR ERVK 0 367 1 7 1724 2065 108 3 26 chrX 149402517 149402559 -17247737 + L1_Mm LINE L1 5368 5408 -475 7 1724 3338 33 2 8 chrX 149402559 149402957 -17247339 + MTA_Mm LTR MaLR 1 396 0 7 1724 2065 108 3 26 chrX 149402957 149403218 -17247078 + L1_Mm LINE L1 5409 5664 -219 7 1724 432 0 0 0 chrX 149403280 149403328 -17246968 + (GA)n Simple_repeat Simple_repeat 2 49 0 7 1724 315 0 0 0 chrX 149404743 149404778 -17245518 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 1724 625 124 0 42 chrX 149404778 149404896 -17245400 - URR1B DNA MER1_type -4 221 109 7 1724 895 288 36 36 chrX 149405040 149405416 -17244880 - RMER15 LTR ERVL -14 561 68 7 1724 1108 262 27 96 chrX 149405416 149405821 -17244475 - MTE2b LTR MaLR 0 379 3 7 1724 365 257 74 95 chrX 149405821 149405886 -17244410 - RMER15 LTR ERVL -508 67 1 7 1724 357 291 55 28 chrX 149406218 149406363 -17243933 + B1F SINE Alu 1 149 0 7 1724 5281 69 10 7 chrX 149406521 149407205 -17243091 - L1Md_F2 LINE L1 -12 6570 5885 7 1724 643 222 34 23 chrX 149407635 149407810 -17242486 + B3 SINE B2 1 177 -39 7 1724 195 69 0 0 chrX 149407828 149407857 -17242439 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 1724 205 182 0 22 chrX 149408843 149408888 -17241408 + (CCCCG)n Simple_repeat Simple_repeat 5 48 0 7 1724 1745 258 95 45 chrX 149411859 149412609 -17237687 - L1_Rod LINE L1 -44 5803 5017 7 1724 1493 106 0 0 chrX 149412627 149412835 -17237461 - Lx2 LINE L1 -15 6982 6775 7 1724 3911 83 2 9 chrX 149412835 149413367 -17236929 - Lx2 LINE L1 -354 6643 6116 7 1724 1152 266 103 112 chrX 149413366 149414122 -17236174 - L1_Mur2 LINE L1 -1053 5090 4322 7 1724 239 181 311 9 chrX 149414131 149414237 -17236059 - Lx5 LINE L1 -3 7047 6910 7 1724 5625 227 152 35 chrX 149414283 149416891 -17233405 - Lx5 LINE L1 -1083 5967 2992 7 1724 1522 206 101 176 chrX 149416891 149417154 -17233142 - Lx7 LINE L1 -4 7692 7529 7 1724 1378 83 10 0 chrX 149417154 149417347 -17232949 + L1Md_F2 LINE L1 6387 6581 -1 7 1724 1522 206 101 176 chrX 149417347 149417765 -17232531 - Lx7 LINE L1 -168 7528 7062 7 1724 632 311 40 47 chrX 149417776 149418100 -17232196 - Lx5 LINE L1 -4133 1747 1426 7 1724 1211 55 0 0 chrX 149418100 149418246 -17232050 + B1_Mus2 SINE Alu 2 147 0 7 1724 632 311 40 47 chrX 149418246 149418416 -17231880 - Lx5 LINE L1 -4455 1425 1256 7 1724 1295 205 84 84 chrX 149418706 149419073 -17231223 - ORR1D2 LTR MaLR 0 370 4 7 1724 336 48 0 0 chrX 149420977 149421019 -17229277 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1724 339 78 0 0 chrX 149421029 149421080 -17229216 + (CCTG)n Simple_repeat Simple_repeat 1 51 0 7 1725 402 139 0 0 chrX 149422822 149422894 -17227402 + (TAA)n Simple_repeat Simple_repeat 3 74 0 7 1725 200 289 35 49 chrX 149424045 149424187 -17226109 - L2 LINE L2 -563 2856 2717 7 1725 1393 241 44 37 chrX 149424586 149424995 -17225301 - MTC LTR MaLR -8 413 2 7 1725 6780 87 22 5 chrX 149425352 149426280 -17224016 - L1_Mus2 LINE L1 0 6566 5624 7 1725 216 277 0 30 chrX 149427329 149427374 -17222922 + polypyrimidine Low_complexity Low_complexity 23 66 0 7 1725 1208 86 6 0 chrX 149427374 149427549 -17222747 + (TTTC)n Simple_repeat Simple_repeat 4 179 0 7 1725 216 277 0 30 chrX 149427549 149427570 -17222726 + polypyrimidine Low_complexity Low_complexity 2 22 0 7 1725 186 128 0 0 chrX 149428595 149428634 -17221662 + (TC)n Simple_repeat Simple_repeat 2 40 0 7 1725 265 297 0 0 chrX 149428637 149428738 -17221558 + (CA)n Simple_repeat Simple_repeat 2 102 0 7 1725 336 48 0 0 chrX 149429789 149429831 -17220465 + (GA)n Simple_repeat Simple_repeat 1 42 0 7 1725 450 0 0 0 chrX 149430166 149430216 -17220080 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 1725 228 323 0 68 chrX 149431165 149431268 -17219028 - RCHARR1 DNA MER1_type -27 947 852 7 1725 1694 297 87 60 chrX 149432543 149433511 -17216785 + Lx8 LINE L1 6333 7326 -147 7 1725 230 318 0 137 chrX 149435089 149435191 -17215105 - PB1D9 SINE Alu -32 88 1 7 1725 252 0 0 0 chrX 149437330 149437358 -17212938 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 1725 300 27 0 0 chrX 149437516 149437553 -17212743 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1725 639 95 0 0 chrX 149437553 149437658 -17212638 + (GA)n Simple_repeat Simple_repeat 1 105 0 7 1725 411 68 0 0 chrX 149439518 149439577 -17210719 + (TC)n Simple_repeat Simple_repeat 1 59 0 7 1725 255 268 0 0 chrX 149439591 149439662 -17210634 + GA-rich Low_complexity Low_complexity 1 71 0 7 1725 288 200 0 0 chrX 149440717 149440782 -17209514 + T-rich Low_complexity Low_complexity 1 65 0 7 1725 21 36 0 0 chrX 149441678 149441706 -17208590 + GC_rich Low_complexity Low_complexity 1 28 0 7 1725 233 194 0 46 chrX 149442177 149442242 -17208054 + C-rich Low_complexity Low_complexity 4 65 0 7 1725 221 267 0 0 chrX 149443965 149444025 -17206271 + A-rich Low_complexity Low_complexity 1 60 0 7 1725 31 82 0 0 chrX 149444512 149444585 -17205711 + AT_rich Low_complexity Low_complexity 1 73 0 7 1725 276 231 103 142 chrX 149445650 149445882 -17204414 + L2c LINE L2 3110 3332 -55 7 1725 2455 111 75 26 chrX 149446418 149446806 -17203490 + MTB_Mm LTR MaLR 1 407 0 7 1725 483 253 426 21 chrX 149446962 149447191 -17203105 - MTC LTR MaLR -99 322 1 7 1725 672 297 58 45 chrX 149447275 149447652 -17202644 - MLT1A1 LTR MaLR 0 408 1 7 1725 996 192 30 68 chrX 149447891 149448126 -17202170 + URR1A DNA MER1_type 1 226 0 7 1725 341 229 9 0 chrX 149448953 149449058 -17201238 + (TG)n Simple_repeat Simple_repeat 1 106 0 7 1725 430 259 47 86 chrX 149449058 149449260 -17201036 - B3A SINE B2 -13 203 6 7 1725 1407 258 84 5 chrX 149449334 149449716 -17200580 + MTD LTR MaLR 8 419 0 7 1725 261 0 0 0 chrX 149450105 149450134 -17200162 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 7 1725 255 268 0 0 chrX 149451207 149451278 -17199018 + CT-rich Low_complexity Low_complexity 1 71 0 7 1725 657 25 0 0 chrX 149451292 149451371 -17198925 + (GA)n Simple_repeat Simple_repeat 1 79 0 7 1725 489 147 0 0 chrX 149453227 149453336 -17196960 + (TC)n Simple_repeat Simple_repeat 1 109 0 7 1725 282 29 0 0 chrX 149453336 149453371 -17196925 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1725 285 29 0 0 chrX 149453525 149453559 -17196737 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1725 243 307 0 137 chrX 149455699 149455801 -17194495 + PB1D9 SINE Alu 1 88 -32 7 1725 1709 298 89 65 chrX 149457309 149458349 -17191947 - Lx8 LINE L1 -76 7397 6333 7 1725 414 0 0 0 chrX 149460672 149460718 -17189578 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1725 615 27 0 0 chrX 149461046 149461119 -17189177 + (TC)n Simple_repeat Simple_repeat 1 73 0 7 1725 290 284 0 0 chrX 149462169 149462271 -17188025 + (TG)n Simple_repeat Simple_repeat 2 103 0 7 1725 378 57 0 0 chrX 149462272 149462325 -17187971 + (CAGAGA)n Simple_repeat Simple_repeat 6 58 0 7 1725 877 137 12 12 chrX 149463393 149463556 -17186740 + GA-rich Low_complexity Low_complexity 1 163 0 7 1725 6880 83 19 5 chrX 149464594 149465524 -17184772 + L1_Mus2 LINE L1 5624 6566 0 7 1725 1407 236 44 37 chrX 149465880 149466289 -17184007 + MTC LTR MaLR 2 413 -8 7 1725 375 145 0 0 chrX 149467971 149468040 -17182256 + (TTA)n Simple_repeat Simple_repeat 3 71 0 7 1725 282 106 0 0 chrX 149469780 149469827 -17180469 + (CAGG)n Simple_repeat Simple_repeat 1 47 0 7 1725 327 65 0 0 chrX 149469827 149469873 -17180423 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1725 209 152 21 21 chrX 149472380 149472427 -17177869 + (GGGTG)n Simple_repeat Simple_repeat 3 49 0 7 1725 336 24 0 0 chrX 149473413 149473454 -17176842 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1725 652 208 28 17 chrX 149473465 149473641 -17176655 - B3A SINE B2 -20 178 1 7 1725 2076 193 77 14 chrX 149474149 149474665 -17175631 - Lx9 LINE L1 0 7644 6948 7 1725 21 57 0 0 chrX 149474708 149474743 -17175553 + AT_rich Low_complexity Low_complexity 1 35 0 7 1725 449 305 19 38 chrX 149476338 149476495 -17173801 - RSINE1 SINE B4 -9 156 3 7 1725 331 128 218 0 chrX 149476787 149476865 -17173431 - Lx9 LINE L1 0 7644 7550 7 1725 700 301 84 20 chrX 149476907 149477365 -17172931 - L1MA4 LINE L1 -235 6065 5587 7 1725 245 278 107 36 chrX 149477399 149477554 -17172742 - L1M3 LINE L1 -522 5646 5479 7 1725 237 241 19 0 chrX 149477647 149477701 -17172595 + MurSatRep1 Unknown Unknown 231 285 -1852 7 1725 4476 133 64 27 chrX 149477706 149478629 -17171667 - RMER17B LTR ERVK 0 958 32 7 1725 663 186 105 29 chrX 149478843 149479015 -17171281 + B2_Mm2 SINE B2 1 185 -10 7 1725 473 245 74 68 chrX 149479117 149479279 -17171017 - RSINE1 SINE B4 0 165 3 7 1725 452 239 34 0 chrX 149479526 149479614 -17170682 + B1F1 SINE Alu 1 91 -58 7 1725 444 213 85 140 chrX 149479638 149479802 -17170494 + RSINE1 SINE B4 11 165 0 7 1725 378 0 0 0 chrX 149479957 149479999 -17170297 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1725 2437 269 72 8 chrX 149480003 149480654 -17169642 - Lx8 LINE L1 -146 7327 6635 7 1725 288 351 13 13 chrX 149480684 149480840 -17169456 - L1ME1 LINE L1 -36 6143 5988 7 1725 420 82 0 0 chrX 149480894 149480955 -17169341 + (TA)n Simple_repeat Simple_repeat 2 62 0 7 1725 433 312 27 14 chrX 149481051 149481197 -17169099 + RSINE1 SINE B4 3 150 -15 7 1725 186 43 0 0 chrX 149481197 149481220 -17169076 + (TATATG)n Simple_repeat Simple_repeat 5 27 0 7 1725 234 105 0 0 chrX 149481220 149481257 -17169039 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 1725 2647 283 59 22 chrX 149481277 149482129 -17168167 + Lx9 LINE L1 6574 7456 -188 8 1725 626 276 112 28 chrX 149482347 149482597 -17167699 - B4 SINE B4 -19 273 3 8 1725 415 316 0 0 chrX 149482932 149483049 -17167247 + RSINE1 SINE B4 5 121 -44 8 1725 288 0 0 0 chrX 149483052 149483084 -17167212 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 1725 1285 129 0 5 chrX 149483441 149483636 -17166660 - B2_Mm2 SINE B2 0 195 2 8 1725 1629 248 98 64 chrX 149483739 149484391 -17165905 - Lx8 LINE L1 0 7473 6800 8 1725 909 156 193 6 chrX 149484728 149484909 -17165387 + B3 SINE B2 2 216 0 8 1725 282 29 0 0 chrX 149485505 149485540 -17164756 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8 1725 892 148 7 0 chrX 149485543 149485678 -17164618 - B1_Mur3 SINE Alu -13 136 1 8 1725 712 130 26 0 chrX 149487052 149487167 -17163129 - B2_Mm2 SINE B2 -76 119 2 8 1725 465 214 186 48 chrX 149487206 149487373 -17162923 - Lx9 LINE L1 -70 7574 7385 8 1725 645 234 35 0 chrX 149487456 149487601 -17162695 + Lx8 LINE L1 6874 7023 -450 8 1725 203 256 0 0 chrX 149487601 149487644 -17162652 + GA-rich Low_complexity Low_complexity 4 46 0 8 1725 389 281 100 17 chrX 149488210 149488449 -17161847 - L1M4c LINE L1 -1861 4515 4257 8 1725 366 226 44 105 chrX 149488505 149488619 -17161677 + PB1D10 SINE Alu 15 149 0 8 1725 832 279 73 112 chrX 149488875 149489263 -17161033 - L1M4c LINE L1 -2885 3494 3168 8 1725 1846 204 16 24 chrX 149489263 149489640 -17160656 - ORR1D1 LTR MaLR 0 374 1 8 1725 832 256 129 25 chrX 149489640 149490124 -17160172 - L1M4c LINE L1 -3215 3167 2552 8 1725 560 281 5 67 chrX 149490149 149490359 -17159937 - B3A SINE B2 0 198 2 8 1725 27 0 0 0 chrX 149490377 149490404 -17159892 + AT_rich Low_complexity Low_complexity 1 27 0 8 1725 248 343 0 0 chrX 149490420 149490487 -17159809 - RSINE1 SINE B4 -97 68 2 8 1725 244 214 97 35 chrX 149490506 149490651 -17159645 - L1M4c LINE L1 -4081 2303 2150 8 1725 599 225 126 43 chrX 149490688 149490943 -17159353 - L1MA6 LINE L1 -368 5932 5657 8 1725 270 338 91 78 chrX 149490952 149491097 -17159199 - Lx7 LINE L1 -2 7471 7344 8 1725 423 0 0 0 chrX 149491097 149491144 -17159152 + (TC)n Simple_repeat Simple_repeat 2 48 0 8 1725 270 338 91 78 chrX 149491144 149491232 -17159064 - Lx7 LINE L1 -130 7343 7245 8 1725 1298 220 86 64 chrX 149491232 149491592 -17158704 - ORR1D2 LTR MaLR -2 368 1 8 1725 270 338 91 78 chrX 149491592 149491755 -17158541 - Lx7 LINE L1 -229 7244 7069 8 1725 180 111 0 0 chrX 149492432 149492459 -17157837 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 1725 859 264 119 24 chrX 149492465 149492606 -17157690 - Lx7 LINE L1 -1793 5903 5726 8 1725 423 0 0 0 chrX 149492606 149492653 -17157643 + (TA)n Simple_repeat Simple_repeat 2 48 0 8 1725 859 259 132 24 chrX 149492653 149492917 -17157379 - Lx7 LINE L1 -122 5725 5426 8 1725 500 220 137 34 chrX 149493020 149493206 -17157090 + L1_Mur1 LINE L1 5311 5515 -725 8 1725 652 316 47 19 chrX 149493211 149493228 -17157068 - Lx9 LINE L1 -155 7489 7473 8 1725 929 193 90 15 chrX 149493228 149493428 -17156868 + B3 SINE B2 2 216 0 8 1725 652 316 47 19 chrX 149493428 149493668 -17156628 - Lx9 LINE L1 -172 7472 7226 8 1725 183 42 0 0 chrX 149494052 149494076 -17156220 + (CCCCCA)n Simple_repeat Simple_repeat 3 26 0 8 1725 276 170 0 0 chrX 149494218 149494271 -17156025 + GA-rich Low_complexity Low_complexity 4 56 0 8 1725 2325 60 3 3 chrX 149494530 149494829 -17155467 - L1_Mus2 LINE L1 -1 6565 6267 8 1725 535 304 87 47 chrX 149495006 149495407 -17154889 - L1MDa LINE L1 -4206 2427 2011 8 1725 432 0 0 0 chrX 149495456 149495504 -17154792 + (TC)n Simple_repeat Simple_repeat 2 49 0 8 1725 492 18 0 0 chrX 149495504 149495560 -17154736 + (TG)n Simple_repeat Simple_repeat 2 58 0 8 1725 711 253 0 0 chrX 149495561 149495707 -17154589 - RSINE1 SINE B4 -16 149 4 8 1725 258 105 0 0 chrX 149495752 149495790 -17154506 + (CAA)n Simple_repeat Simple_repeat 2 39 0 8 1725 408 254 282 17 chrX 149495791 149496263 -17154033 - L1MDa LINE L1 -4661 1972 1376 8 1725 603 339 66 20 chrX 149496309 149496704 -17153592 - L1MDa LINE L1 -6202 431 19 8 1725 441 0 0 0 chrX 149497045 149497094 -17153202 + (TC)n Simple_repeat Simple_repeat 1 49 0 8 1725 363 23 0 0 chrX 149497094 149497137 -17153159 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 1725 279 0 0 0 chrX 149497554 149497585 -17152711 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 8 1725 854 147 60 0 chrX 149497585 149497735 -17152561 - B2_Mm2 SINE B2 -36 159 1 8 1725 26 0 0 0 chrX 149497751 149497777 -17152519 + AT_rich Low_complexity Low_complexity 1 26 0 8 1725 238 306 16 16 chrX 149499372 149499498 -17150798 + L1_Mur1 LINE L1 1551 1676 -4210 8 1725 996 278 56 32 chrX 149500009 149500642 -17149654 + L1_Mur3 LINE L1 901 1550 -4330 1 1725 4731 119 17 16 chrX 149500642 149501387 -17148909 - Lx2B LINE L1 -13 6987 6242 2 1725 996 252 56 34 chrX 149501387 149501443 -17148853 + L1_Mur3 LINE L1 1551 1620 -4260 1 1725 555 186 22 44 chrX 149501439 149501574 -17148722 + L1_Mur3 LINE L1 1795 1926 -3954 1 1725 24 85 0 0 chrX 149502695 149502754 -17147542 + AT_rich Low_complexity Low_complexity 1 59 0 3 1725 311 65 22 0 chrX 149503047 149503093 -17147203 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1725 560 318 89 32 chrX 149503385 149503700 -17146596 + MLT1E3 LTR MaLR 53 385 -239 5 1725 485 324 5 71 chrX 149503757 149504016 -17146280 + MTEa LTR MaLR 1 238 -141 6 1725 1117 266 109 37 chrX 149504176 149504661 -17145635 - RMER5 LTR ERV1 -10 524 5 7 1725 764 265 49 18 chrX 149505321 149505544 -17144752 - ORR1D2 LTR MaLR -1 369 140 8 1725 352 146 401 68 chrX 149505545 149505677 -17144619 + URR1A DNA MER1_type 2 177 -49 9 1725 342 277 42 0 chrX 149506186 149506305 -17143991 + L1MD LINE L1 2721 2844 -3302 1 1725 242 361 0 24 chrX 149506305 149506390 -17143906 + ID SINE ID 1 83 -141 1 1725 229 300 22 0 chrX 149506391 149506481 -17143815 + L1MD LINE L1 2824 2915 -3231 1 1725 234 0 0 0 chrX 149506481 149506507 -17143789 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 1725 272 289 37 31 chrX 149506539 149506700 -17143596 + L1MD LINE L1 3087 3248 -2898 1 1725 402 178 9 18 chrX 149506767 149506876 -17143420 + Lx9 LINE L1 7536 7643 -1 1 1725 524 231 233 9 chrX 149506919 149507129 -17143167 + Lx8 LINE L1 7188 7444 -29 1 1725 2357 76 49 0 chrX 149507747 149508075 -17142221 + L1_Mus1 LINE L1 6224 6567 0 1 1725 35658 70 10 1 chrX 149508885 149514800 -17135496 - L1Md_F2 LINE L1 -12 6570 605 1 1725 1611 126 53 11 chrX 149514801 149515082 -17135214 + MTC LTR MaLR 111 403 -18 1 1725 262 0 53 0 chrX 149515118 149515156 -17135140 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 1 1725 1211 296 35 67 chrX 149515160 149515289 -17135007 + L1MA4 LINE L1 3506 3642 -2501 1 1725 1014 106 0 0 chrX 149515289 149515430 -17134866 + B1_Mus1 SINE Alu 1 141 -7 2 1725 267 0 22 44 chrX 149515432 149515477 -17134819 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 2 1725 1211 296 35 67 chrX 149515477 149516123 -17134173 + L1MA4 LINE L1 3643 4256 -1887 1 1725 545 321 48 13 chrX 149516144 149516453 -17133843 + L1MA4 LINE L1 5596 5915 -385 1 1725 872 108 0 0 chrX 149516729 149516858 -17133438 + B1_Mur4 SINE Alu 22 150 0 2 1725 21 36 0 0 chrX 149516877 149516905 -17133391 + AT_rich Low_complexity Low_complexity 1 28 0 2 1725 439 215 0 62 chrX 149516905 149517034 -17133262 + Lx6 LINE L1 7314 7434 -26 2 1725 252 0 0 0 chrX 149517042 149517070 -17133226 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 1725 332 206 89 30 chrX 149517546 149517681 -17132615 + Lx9 LINE L1 7488 7630 -14 2 1725 866 183 0 0 chrX 149517687 149517829 -17132467 - B1_Mur2 SINE Alu -7 142 1 2 1725 370 242 20 0 chrX 149517871 149517970 -17132326 + Arthur1C DNA Tip100 238 338 -25 2 1725 575 254 31 118 chrX 149518395 149518634 -17131662 - ID_B1 SINE B4 -21 203 1 2 1725 664 279 94 39 chrX 149518793 149519012 -17131284 - B4A SINE B4 -55 237 9 3 1725 22 0 0 0 chrX 149519058 149519080 -17131216 + AT_rich Low_complexity Low_complexity 1 22 0 3 1725 1000 45 0 15 chrX 149519156 149519218 -17131078 + (TTC)n Simple_repeat Simple_repeat 1 62 0 3 1725 1620 0 0 0 chrX 149519218 149519398 -17130898 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 3 1725 1000 45 0 15 chrX 149519398 149519471 -17130825 + (TTC)n Simple_repeat Simple_repeat 1 72 0 3 1725 4805 262 72 31 chrX 149519471 149521339 -17128957 - Lx8 LINE L1 -93 7380 5439 3 1725 204 200 0 0 chrX 149521355 149521400 -17128896 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 1725 939 292 25 14 chrX 149521419 149521700 -17128596 - B4 SINE B4 -7 285 2 3 1725 325 42 42 0 chrX 149522012 149522060 -17128236 + B1_Mus2 SINE Alu 98 147 0 3 1725 233 53 53 0 chrX 149522060 149522098 -17128198 + (TAAAA)n Simple_repeat Simple_repeat 3 42 0 3 1725 618 370 119 44 chrX 149522349 149522846 -17127450 + MLT1F2 LTR MaLR 27 560 0 4 1725 892 275 53 50 chrX 149522895 149523313 -17126983 - L1MA8 LINE L1 0 6291 5873 4 1725 1377 77 16 0 chrX 149523804 149523986 -17126310 + B2_Mm2 SINE B2 1 185 -10 4 1725 690 277 53 34 chrX 149524086 149524295 -17126001 - ID_B1 SINE B4 -10 214 2 4 1725 317 253 46 0 chrX 149524388 149524475 -17125821 - Lx8 LINE L1 -4 7469 7379 4 1725 227 239 0 27 chrX 149525638 149525711 -17124585 + Lx8 LINE L1 7401 7471 -2 4 1725 1474 246 50 0 chrX 149526132 149526493 -17123803 + MTE2b LTR MaLR 1 379 0 4 1725 789 305 83 37 chrX 149526508 149526967 -17123329 - MTE-int LTR MaLR -1067 513 34 4 1725 1079 65 36 0 chrX 149526983 149527121 -17123175 - B1_Mus1 SINE Alu -5 143 1 4 1725 333 190 20 0 chrX 149527379 149527479 -17122817 - Lx9 LINE L1 -9 7635 7534 4 1725 288 200 47 59 chrX 149527579 149527664 -17122632 - L1_Rod LINE L1 -7057 115 32 5 1725 244 257 127 40 chrX 149527790 149528114 -17122182 + L1M3 LINE L1 2884 3235 -2905 5 1725 952 131 0 0 chrX 149528122 149528259 -17122037 + B1_Mus1 SINE Alu 2 138 -10 5 1725 252 0 0 0 chrX 149528259 149528287 -17122009 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1725 315 251 100 11 chrX 149528393 149528547 -17121749 + L1_Mur3 LINE L1 5321 5481 -399 5 1725 782 51 246 0 chrX 149528576 149528694 -17121602 + B1_Mus1 SINE Alu 2 148 0 5 1725 347 235 12 36 chrX 149528709 149528793 -17121503 + B3A SINE B2 27 108 -90 5 1725 226 233 216 23 chrX 149528839 149528927 -17121369 + L1M4c LINE L1 359 463 -6144 5 1725 6381 35 2 0 chrX 149529051 149530041 -17120255 - L1Md_F2 LINE L1 -494 6088 5098 5 1725 4019 42 0 6 chrX 149530041 149530527 -17119769 + L1Md_F2 LINE L1 6098 6580 -2 5 1725 343 202 11 11 chrX 149530574 149530664 -17119632 - Lx7 LINE L1 0 7696 7607 5 1725 803 245 21 11 chrX 149530670 149530860 -17119436 - Lx7 LINE L1 -286 7410 7219 5 1725 441 0 0 0 chrX 149530860 149530909 -17119387 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1725 226 289 24 88 chrX 149531237 149531362 -17118934 - PB1D10 SINE Alu 0 117 1 6 1725 525 58 0 0 chrX 149531418 149531487 -17118809 + (TG)n Simple_repeat Simple_repeat 2 70 0 6 1725 336 283 158 7 chrX 149531492 149531631 -17118665 - B3 SINE B2 -34 182 23 6 1725 557 307 85 52 chrX 149531637 149532270 -17118026 + L1M4c LINE L1 1291 1944 -4805 5 1725 228 273 0 0 chrX 149532270 149532314 -17117982 + (CG)n Simple_repeat Simple_repeat 2 45 0 6 1725 284 48 24 0 chrX 149532327 149532369 -17117927 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 1725 26 50 0 0 chrX 149532416 149532456 -17117840 + AT_rich Low_complexity Low_complexity 1 40 0 6 1725 1097 70 7 0 chrX 149532613 149532755 -17117541 + B1_Mus1 SINE Alu 1 143 -5 6 1725 1475 28 0 6 chrX 149532756 149532937 -17117359 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 6 1725 339 85 0 0 chrX 149532939 149532986 -17117310 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 6 1725 1509 23 0 0 chrX 149532991 149533168 -17117128 + (GGAAA)n Simple_repeat Simple_repeat 3 179 0 7 1725 268 83 0 40 chrX 149533320 149533370 -17116926 + (TA)n Simple_repeat Simple_repeat 1 48 0 7 1725 231 36 0 0 chrX 149533384 149533412 -17116884 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 7 1725 674 280 115 68 chrX 149533476 149533921 -17116375 - MLT2B4 LTR ERVL -6 556 11 7 1725 461 270 223 17 chrX 149533928 149534278 -17116018 + L1M4c LINE L1 4451 4872 -1869 5 1725 265 291 179 43 chrX 149534509 149534789 -17115507 + L1M4c LINE L1 5043 5360 -1381 5 1725 1032 231 10 0 chrX 149534976 149535184 -17115112 + B3 SINE B2 2 211 -5 7 1725 617 223 175 63 chrX 149535210 149535478 -17114818 - Lx9 LINE L1 -1205 6439 6142 7 1725 234 0 0 0 chrX 149535626 149535652 -17114644 + (T)n Simple_repeat Simple_repeat 1 26 0 7 1725 1169 57 0 0 chrX 149535665 149535806 -17114490 - B1_Mus1 SINE Alu -7 141 1 7 1725 384 77 0 0 chrX 149536035 149536087 -17114209 + (TA)n Simple_repeat Simple_repeat 2 53 0 7 1725 3155 272 48 47 chrX 149536091 149536616 -17113680 + Lx9 LINE L1 6357 6898 -746 7 1725 1525 36 0 77 chrX 149536616 149536824 -17113472 - B2_Mm1t SINE B2 0 193 2 8 1725 1284 83 33 0 chrX 149536829 149537009 -17113287 - B2_Mm1t SINE B2 -3 190 5 8 1725 3155 272 48 47 chrX 149537009 149537492 -17112804 + Lx9 LINE L1 6899 7372 -272 7 1725 459 35 0 0 chrX 149537543 149537600 -17112696 + (CA)n Simple_repeat Simple_repeat 1 57 0 8 1725 234 281 129 55 chrX 149537729 149537985 -17112311 + L1M3 LINE L1 3267 3541 -2599 8 1725 287 256 24 12 chrX 149537991 149538074 -17112222 + Lx9 LINE L1 7228 7311 -333 8 1725 492 32 0 0 chrX 149538109 149538171 -17112125 + (TG)n Simple_repeat Simple_repeat 2 63 0 8 1725 188 136 68 0 chrX 149538296 149538340 -17111956 + A-rich Low_complexity Low_complexity 3 49 0 8 1725 1535 190 24 31 chrX 149538624 149538912 -17111384 + Lx9 LINE L1 6398 6683 -961 8 1725 1994 194 51 8 chrX 149538922 149539317 -17110979 - MTC LTR MaLR 0 421 10 8 1725 1359 243 0 3 chrX 149539317 149539614 -17110682 + Lx9 LINE L1 6701 6996 -648 8 1725 1101 84 26 0 chrX 149539616 149539770 -17110526 + B2_Mm2 SINE B2 1 158 -37 8 1725 1828 239 31 39 chrX 149539783 149540270 -17110026 + Lx9 LINE L1 6999 7481 -163 8 1725 274 266 141 4 chrX 149540309 149540543 -17109753 + L1M2 LINE L1 3267 3532 -2608 9 1725 250 298 63 40 chrX 149540540 149540666 -17109630 + Lx8 LINE L1 7085 7213 -260 9 1725 300 27 0 0 chrX 149540669 149540706 -17109590 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 1725 248 262 0 0 chrX 149540719 149540780 -17109516 + (TA)n Simple_repeat Simple_repeat 1 61 0 9 1725 393 194 46 23 chrX 149540841 149541078 -17109218 + (TA)n Simple_repeat Simple_repeat 1 242 0 9 1725 214 236 70 16 chrX 149540983 149541112 -17109184 + (TATATG)n Simple_repeat Simple_repeat 3 138 0 9 1725 250 126 62 21 chrX 149541112 149541209 -17109087 + (TATAA)n Simple_repeat Simple_repeat 4 104 0 9 1725 334 192 19 58 chrX 149541224 149541379 -17108917 + (TTATA)n Simple_repeat Simple_repeat 1 149 0 9 1725 427 276 55 49 chrX 149541403 149541595 -17108701 + L1M2 LINE L1 4247 4454 -1692 9 1725 1331 81 32 5 chrX 149541621 149541808 -17108488 - B2_Mm2 SINE B2 -3 192 1 9 1725 405 39 0 0 chrX 149542031 149542082 -17108214 + (CA)n Simple_repeat Simple_repeat 1 51 0 9 1725 500 163 130 116 chrX 149542299 149542404 -17107892 - B1_Mus1 SINE Alu 0 148 38 9 1725 1428 69 16 11 chrX 149542404 149542594 -17107702 - B2_Mm1a SINE B2 -1 192 2 1 1725 500 163 130 116 chrX 149542594 149542634 -17107662 - B1_Mus1 SINE Alu -111 37 1 9 1725 438 20 0 0 chrX 149542813 149542864 -17107432 + (CATA)n Simple_repeat Simple_repeat 3 53 0 1 1725 31 26 0 0 chrX 149542923 149542961 -17107335 + AT_rich Low_complexity Low_complexity 1 38 0 1 1725 252 0 0 0 chrX 149543009 149543037 -17107259 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 1725 44 80 0 0 chrX 149543046 149543146 -17107150 + AT_rich Low_complexity Low_complexity 1 100 0 1 1725 636 172 55 0 chrX 149543146 149543309 -17106987 + Lx9 LINE L1 7472 7643 -1 8 1725 250 307 121 12 chrX 149544887 149545052 -17105244 - L1MA5A LINE L1 -268 6029 5847 1 1725 1137 68 0 0 chrX 149545194 149545340 -17104956 + B1_Mus2 SINE Alu 2 147 0 1 1725 228 291 0 0 chrX 149545642 149545697 -17104599 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1725 1300 77 32 21 chrX 149545857 149546043 -17104253 - B2_Mm2 SINE B2 -7 188 1 1 1725 283 24 0 0 chrX 149546070 149546111 -17104185 - L1Md_F3 LINE L1 -15 6569 6529 1 1725 1199 48 0 0 chrX 149546111 149546257 -17104039 + B1_Mus2 SINE Alu 2 147 0 1 1725 191 61 30 0 chrX 149546257 149546290 -17104006 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1725 4937 44 27 2 chrX 149546292 149546912 -17103384 - L1Md_F3 LINE L1 -42 6542 5907 1 1725 22 0 0 0 chrX 149546924 149546946 -17103350 + AT_rich Low_complexity Low_complexity 1 22 0 1 1725 222 207 0 0 chrX 149547460 149547518 -17102778 + CT-rich Low_complexity Low_complexity 3 60 0 1 1725 1295 101 11 0 chrX 149548148 149548336 -17101960 - B2_Mm1t SINE B2 -2 191 2 1 1725 774 161 88 0 chrX 149548891 149549028 -17101268 + B1_Mur4 SINE Alu 2 150 0 1 1725 744 115 0 0 chrX 149549061 149549174 -17101122 + (GGAA)n Simple_repeat Simple_repeat 2 114 0 1 1725 736 164 147 38 chrX 149549749 149549933 -17100363 - RMER10B LTR ERVL -1 397 194 1 1725 1243 186 24 41 chrX 149549930 149550291 -17100005 - RMER10B LTR ERVL -70 372 1 1 1725 22 56 0 0 chrX 149551079 149551115 -17099181 + AT_rich Low_complexity Low_complexity 1 36 0 1 1725 346 360 61 22 chrX 149551697 149551927 -17098369 + L1ME3 LINE L1 5922 6160 -2 1 215 4638 168 60 17 chrX 149552887 149554253 -17096043 + Lx6 LINE L1 17 1014 -6714 1 1726 453 19 0 0 chrX 149554253 149554307 -17095989 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1726 2584 151 45 22 chrX 149554307 149555073 -17095223 + Lx6 LINE L1 1015 1797 -4083 1 1726 9722 127 43 43 chrX 149555078 149555590 -17094706 + Lx6 LINE L1 4103 4627 -1253 1 1726 246 32 0 0 chrX 149555590 149555621 -17094675 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 1 1726 9722 158 98 34 chrX 149555621 149556169 -17094127 + Lx6 LINE L1 4628 5226 -2234 1 1726 292 26 0 0 chrX 149556169 149556207 -17094089 + tRNA-Ile-ATA tRNA tRNA 1 38 -39 1 1726 9722 158 98 34 chrX 149556207 149557464 -17092832 + Lx6 LINE L1 5227 6602 -858 1 1726 287 266 25 0 chrX 149557489 149557568 -17092728 - RSINE1 SINE B4 -78 87 7 1 1726 499 288 17 124 chrX 149557817 149558051 -17092245 + MTEa LTR MaLR 1 209 -170 1 1726 626 292 74 37 chrX 149558210 149558427 -17091869 + MTE-int LTR MaLR 187 411 -1169 1 1726 278 313 62 115 chrX 149558484 149558614 -17091682 + MTE-int LTR MaLR 552 674 -906 1 1726 1212 35 0 7 chrX 149558659 149558804 -17091492 + B1_Mm SINE Alu 2 145 -2 1 1726 290 87 22 0 chrX 149558841 149558887 -17091409 + (GAA)n Simple_repeat Simple_repeat 2 48 0 1 1726 216 0 0 0 chrX 149559239 149559263 -17091033 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 1726 1157 75 0 0 chrX 149559896 149560043 -17090253 + B1_Mus1 SINE Alu 2 148 0 1 1726 648 283 0 37 chrX 149560161 149560348 -17089948 + B3A SINE B2 3 182 -16 1 1726 22 0 0 0 chrX 149560357 149560379 -17089917 + AT_rich Low_complexity Low_complexity 1 22 0 1 1726 601 232 64 32 chrX 149560739 149560895 -17089401 - RSINE1 SINE B4 -3 162 2 1 1726 234 0 0 0 chrX 149561012 149561038 -17089258 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1 1726 243 111 0 0 chrX 149562592 149562628 -17087668 + PB1D7 SINE Alu 1 36 -84 1 1726 265 308 193 50 chrX 149562634 149562735 -17087561 + RSINE1 SINE B4 4 128 -37 1 1726 234 62 0 0 chrX 149562735 149562767 -17087529 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1726 265 308 193 50 chrX 149562767 149562805 -17087491 + RSINE1 SINE B4 129 163 -2 1 1726 555 331 7 26 chrX 149563063 149563218 -17087078 + RSINE1 SINE B4 2 153 -12 1 1726 468 0 0 0 chrX 149563225 149563277 -17087019 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 1726 261 0 0 0 chrX 149563277 149563305 -17086991 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1726 186 361 14 0 chrX 149564313 149564385 -17085911 + MIRc SINE MIR 113 185 -83 1 1726 207 273 0 18 chrX 149565095 149565151 -17085145 - MIR3 SINE MIR -46 162 108 1 1726 232 204 0 20 chrX 149565602 149565652 -17084644 + (TATG)n Simple_repeat Simple_repeat 4 52 0 1 1726 874 255 39 32 chrX 149565661 149565945 -17084351 - B4A SINE B4 -6 286 1 1 1726 227 372 31 47 chrX 149566725 149566852 -17083444 - L2b LINE L2 -204 3171 3047 1 1726 315 0 0 0 chrX 149567853 149567888 -17082408 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1726 556 349 19 35 chrX 149567892 149568153 -17082143 - B4A SINE B4 -14 278 22 1 1726 189 0 0 0 chrX 149568208 149568229 -17082067 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 1726 1161 258 25 68 chrX 149569275 149569670 -17080626 - MTE2a LTR MaLR 0 379 2 1 1726 516 304 37 33 chrX 149570048 149570293 -17080003 - L1M3 LINE L1 -2514 3626 3381 1 1726 207 250 0 0 chrX 149570293 149570314 -17079982 + polypyrimidine Low_complexity Low_complexity 24 44 0 1 1726 957 106 0 38 chrX 149570314 149570500 -17079796 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 1 1726 207 250 0 0 chrX 149570500 149570522 -17079774 + polypyrimidine Low_complexity Low_complexity 2 23 0 1 1726 654 49 0 0 chrX 149570523 149570605 -17079691 + (TTTC)n Simple_repeat Simple_repeat 2 83 0 1 1726 394 234 46 40 chrX 149570609 149570760 -17079536 + Lx6 LINE L1 7309 7460 0 1 1726 1493 252 167 30 chrX 149570764 149571708 -17078588 - L1M3 LINE L1 -2739 3401 2328 1 1726 332 375 25 0 chrX 149571740 149571900 -17078396 - MIRb SINE MIR -11 257 94 1 1726 1606 228 28 6 chrX 149571977 149572339 -17077957 - ORR1D2 LTR MaLR 0 370 1 1 1726 216 294 90 56 chrX 149572764 149572998 -17077298 + L2 LINE L2 1486 1727 -1692 1 1726 1487 151 84 25 chrX 149573312 149573632 -17076664 + Lx9 LINE L1 7306 7644 0 1 1726 196 225 84 0 chrX 149574079 149574150 -17076146 - MIR SINE MIR -3 259 183 1 1726 200 301 117 11 chrX 149576268 149576362 -17073934 + MIR SINE MIR 93 196 -66 1 1726 185 0 0 39 chrX 149577150 149577176 -17073120 + (TTTTTA)n Simple_repeat Simple_repeat 6 30 0 1 1726 1051 71 0 0 chrX 149577176 149577316 -17072980 - B1_Mus1 SINE Alu 0 148 9 1 1726 1318 131 51 9 chrX 149577523 149577739 -17072557 - URR1B DNA MER1_type 0 225 1 1 1726 397 185 11 110 chrX 149577765 149577856 -17072440 - ID SINE ID -142 82 1 1 1726 342 0 0 0 chrX 149578258 149578296 -17072000 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1726 302 351 131 48 chrX 149579739 149580137 -17070159 - L3 LINE CR1 -510 3979 3549 1 1726 1601 32 0 16 chrX 149580138 149580329 -17069967 + B2_Mm1a SINE B2 1 188 -5 1 1726 311 328 15 24 chrX 149582090 149582226 -17068070 + MLT1A1 LTR MaLR 192 349 -59 1 1726 512 333 189 32 chrX 149582237 149582892 -17067404 - L2 LINE L2 -711 2708 1951 1 1726 254 300 14 41 chrX 149583032 149583105 -17067191 - L2c LINE L2 -24 3363 3293 1 1726 490 291 131 22 chrX 149583134 149583317 -17066979 - MIRb SINE MIR -20 248 46 1 1726 231 111 0 0 chrX 149583534 149583570 -17066726 + MIRm SINE MIR 228 263 -13 1 1726 461 367 104 25 chrX 149583739 149584055 -17066241 + MER102b DNA MER1_type 1 341 0 1 1726 200 295 39 47 chrX 149584174 149584302 -17065994 - L2c LINE L2 -514 2905 2779 1 1726 201 146 0 59 chrX 149584498 149584549 -17065747 + T-rich Low_complexity Low_complexity 3 50 0 1 1726 260 353 93 7 chrX 149585470 149585608 -17064688 + MIR SINE MIR 90 241 -21 1 1726 1156 75 0 0 chrX 149585608 149585755 -17064541 + B1_Mus1 SINE Alu 2 148 0 1 1726 260 353 93 7 chrX 149585755 149585767 -17064529 + MIR SINE MIR 242 253 -9 1 1726 294 95 0 0 chrX 149586604 149586646 -17063650 + (GTTTG)n Simple_repeat Simple_repeat 4 45 0 1 1726 1478 48 0 36 chrX 149586813 149587007 -17063289 + B2_Mm2 SINE B2 2 188 -7 1 1726 229 235 0 0 chrX 149587396 149587447 -17062849 + PB1D9 SINE Alu 45 95 -25 1 1726 598 135 96 0 chrX 149588572 149588676 -17061620 - B1_Mur4 SINE Alu -35 115 2 1 1726 239 237 0 17 chrX 149588627 149588687 -17061609 - B4A SINE B4 -158 134 76 1 1726 422 272 12 135 chrX 149588906 149589076 -17061220 - MLT2D LTR ERVL 0 560 412 1 1726 713 205 33 0 chrX 149589078 149589270 -17061026 + L1_Mur3 LINE L1 4146 4370 -1776 1 1726 872 272 27 27 chrX 149589396 149589657 -17060639 - ERVL-B4-int LTR ERVL -3885 1829 1569 1 1726 717 307 109 23 chrX 149589672 149589975 -17060321 - ERVL-B4-int LTR ERVL -4197 1517 1189 1 1726 821 148 57 25 chrX 149589988 149590147 -17060149 - B2_Mm2 SINE B2 -31 164 1 1 1726 288 308 26 0 chrX 149590369 149590447 -17059849 - ERVL-B4-int LTR ERVL -4811 946 867 1 1726 845 319 65 13 chrX 149590462 149590916 -17059380 - ERVL-B4-int LTR ERVL -4950 717 243 1 1726 511 295 16 37 chrX 149591067 149591257 -17059039 - Lx7 LINE L1 -683 7013 6828 1 1726 207 133 0 0 chrX 149591295 149591340 -17058956 + (T)n Simple_repeat Simple_repeat 1 45 0 1 1726 1700 242 27 17 chrX 149591484 149591887 -17058409 - Lx9 LINE L1 -469 7175 6769 1 1726 248 326 88 29 chrX 149591871 149592111 -17058185 + Lx9 LINE L1 7378 7631 -13 1 1726 25 0 0 0 chrX 149592117 149592142 -17058154 + AT_rich Low_complexity Low_complexity 1 25 0 1 1726 755 274 5 17 chrX 149595485 149595705 -17054591 - B3A SINE B2 -6 210 2 1 1726 25 0 0 0 chrX 149595709 149595734 -17054562 + AT_rich Low_complexity Low_complexity 1 25 0 1 1726 656 126 168 0 chrX 149595738 149595857 -17054439 + B1_Mus1 SINE Alu 3 141 -7 1 1726 243 0 0 0 chrX 149595858 149595885 -17054411 + (CCA)n Simple_repeat Simple_repeat 1 27 0 1 1726 230 364 54 9 chrX 149595980 149596091 -17054205 + MIRb SINE MIR 66 181 -87 1 1726 423 102 0 0 chrX 149596135 149596194 -17054102 + B2_Mm2 SINE B2 86 144 -51 1 1726 279 0 0 0 chrX 149596200 149596231 -17054065 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1726 400 355 90 55 chrX 149597129 149597329 -17052967 - MER47B DNA MER2_type -151 267 61 2 1726 201 147 0 0 chrX 149597368 149597402 -17052894 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2 1726 824 138 50 14 chrX 149597403 149597543 -17052753 - B1_Mus1 SINE Alu -1 147 3 2 1726 1119 82 0 0 chrX 149599012 149599159 -17051137 + B1_Mus2 SINE Alu 1 147 0 2 1726 845 237 72 0 chrX 149599284 149599478 -17050818 + B3 SINE B2 3 210 -6 2 1726 236 354 86 24 chrX 149599512 149599716 -17050580 + Lx7 LINE L1 2175 2389 -4460 2 1726 951 141 51 45 chrX 149599716 149599894 -17050402 - B2_Mm2 SINE B2 -15 180 2 2 1726 271 292 10 17 chrX 149599894 149600025 -17050271 + Lx7 LINE L1 2166 2271 -4673 2 1726 243 0 0 0 chrX 149600025 149600052 -17050244 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1726 585 0 0 0 chrX 149600052 149600116 -17050180 + (GA)n Simple_repeat Simple_repeat 2 66 0 2 1726 729 332 80 37 chrX 149600298 149601133 -17049163 + Lx7 LINE L1 2926 3796 -3049 2 1726 535 293 88 30 chrX 149601652 149601983 -17048313 + Lx7 LINE L1 3775 4124 -2721 2 1726 1222 276 57 17 chrX 149602025 149602485 -17047811 + Lx7 LINE L1 4363 4840 -2005 2 1726 306 0 0 0 chrX 149602522 149602556 -17047740 + (GA)n Simple_repeat Simple_repeat 2 35 0 2 1726 238 249 152 0 chrX 149602556 149602710 -17047586 + Lx7 LINE L1 4846 5042 -1803 2 1726 487 217 36 139 chrX 149602739 149602751 -17047545 + B4 SINE B4 73 82 -210 2 1726 396 101 101 0 chrX 149602751 149602830 -17047466 + Lx9 LINE L1 7558 7644 0 2 1726 487 217 36 139 chrX 149602830 149602983 -17047313 + B4 SINE B4 83 221 -71 2 1726 990 52 0 36 chrX 149602849 149602988 -17047308 + B1_Mm SINE Alu 14 147 0 2 1726 820 262 22 129 chrX 149602989 149603530 -17046766 + Lx7 LINE L1 5015 5473 -1106 2 1726 524 180 72 24 chrX 149603550 149603675 -17046621 + URR1A DNA MER1_type 59 189 -37 2 1726 252 274 53 33 chrX 149603683 149603838 -17046458 + Lx7 LINE L1 6341 6532 -470 2 1726 929 23 130 23 chrX 149603838 149603969 -17046327 + B1_Mm SINE Alu 3 147 0 2 1726 234 274 69 81 chrX 149603969 149604063 -17046233 + Lx7 LINE L1 6533 6621 -381 2 1726 1134 62 130 0 chrX 149604063 149604224 -17046072 + B2_Mm2 SINE B2 3 184 -11 2 1726 379 228 0 0 chrX 149604941 149605020 -17045276 + L1MB4 LINE L1 6067 6145 -35 2 1726 208 162 57 29 chrX 149605025 149605095 -17045201 + (TA)n Simple_repeat Simple_repeat 2 73 0 2 1726 715 203 36 0 chrX 149606258 149606396 -17043900 + B1F SINE Alu 1 143 -6 2 1726 414 0 0 0 chrX 149606397 149606443 -17043853 + (TA)n Simple_repeat Simple_repeat 1 46 0 2 1726 1392 74 26 5 chrX 149606619 149606809 -17043487 + B2_Mm2 SINE B2 2 195 0 2 1726 370 320 0 0 chrX 149607040 149607140 -17043156 + RSINE1 SINE B4 17 116 -49 2 1726 1246 102 23 0 chrX 149607474 149607651 -17042645 + B2_Mm1t SINE B2 2 182 -11 2 1726 279 113 0 46 chrX 149607718 149607783 -17042513 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 2 1726 219 319 14 28 chrX 149608210 149608281 -17042015 - MER5A DNA MER1_type 0 189 120 2 1726 544 293 17 51 chrX 149608283 149608443 -17041853 + B3 SINE B2 11 163 -53 2 1726 627 14 0 0 chrX 149608443 149608515 -17041781 + (TA)n Simple_repeat Simple_repeat 2 73 0 2 1726 544 293 17 51 chrX 149608515 149608530 -17041766 + B3 SINE B2 164 179 -37 2 1726 588 259 13 67 chrX 149608516 149608665 -17041631 - MER5A DNA MER1_type -48 141 1 2 1726 255 325 3 36 chrX 149609010 149609119 -17041177 - MIR SINE MIR -54 214 110 2 1726 399 41 0 0 chrX 149609243 149609292 -17041004 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1726 859 160 64 37 chrX 149609405 149609593 -17040703 + B2_Mm2 SINE B2 2 194 -1 2 1726 798 61 165 165 chrX 149609632 149609736 -17040560 + B2_Mm2 SINE B2 2 132 -63 2 1726 3507 50 5 7 chrX 149609736 149610181 -17040115 + L1Md_F2 LINE L1 6126 6569 -13 2 1726 798 61 165 165 chrX 149610181 149610252 -17040044 + B2_Mm2 SINE B2 133 177 -18 2 1726 617 0 0 14 chrX 149610252 149610326 -17039970 + (GAA)n Simple_repeat Simple_repeat 2 74 0 2 1726 897 276 122 91 chrX 149610805 149611287 -17039009 + MLT1D LTR MaLR 1 497 -8 2 1726 450 103 0 0 chrX 149611325 149611403 -17038893 + (TG)n Simple_repeat Simple_repeat 2 79 0 2 1726 512 234 93 38 chrX 149611795 149612050 -17038246 - ORR1D1 LTR MaLR -90 277 1 2 1726 407 316 100 46 chrX 149612312 149612575 -17037721 - MLT2B4 LTR ERVL -166 354 89 2 1726 318 365 88 0 chrX 149612659 149612818 -17037478 - L2a LINE L2 -267 3159 2987 2 1726 1382 98 11 11 chrX 149612848 149613034 -17037262 - B2_Mm1t SINE B2 -7 186 1 2 1726 560 297 0 26 chrX 149613051 149613203 -17037093 + RSINE1 SINE B4 16 163 -2 2 1726 260 250 90 8 chrX 149613250 149613383 -17036913 - B2_Mm2 SINE B2 -5 190 47 2 1726 1286 100 35 0 chrX 149613449 149613619 -17036677 - B2_Mm1t SINE B2 -14 179 4 2 1726 186 330 288 10 chrX 149613642 149613951 -17036345 - L2a LINE L2 -523 2896 2502 2 1726 568 262 73 43 chrX 149614229 149614427 -17035869 - MT2A LTR ERVL -181 294 82 2 1726 1432 82 27 16 chrX 149614427 149614614 -17035682 + B2_Mm2 SINE B2 2 190 -5 2 1726 568 208 7 81 chrX 149614614 149614693 -17035603 - MT2A LTR ERVL -452 81 3 2 1726 282 164 0 0 chrX 149614694 149614749 -17035547 - MERVL_2A-int LTR ERVL 0 5761 5707 2 1726 284 171 55 41 chrX 149614749 149614822 -17035474 - ORR1A3-int LTR MaLR -1323 640 567 2 1726 263 167 0 62 chrX 149614831 149614895 -17035401 - ORR1A3-int LTR MaLR -1340 623 564 2 1726 637 120 0 0 chrX 149614896 149614988 -17035308 - MERVL_2A-int LTR ERVL -139 5622 5531 2 1726 600 200 0 16 chrX 149614976 149615098 -17035198 - ERVL-B4-int LTR ERVL -1648 4066 3947 2 1726 2583 144 34 10 chrX 149615082 149615495 -17034801 - MERVL_2A-int LTR ERVL -4143 1618 1196 2 1726 869 244 74 80 chrX 149616156 149616455 -17033841 - MT2B LTR ERVL 0 601 305 2 1726 1234 55 0 7 chrX 149616465 149616613 -17033683 + B1_Mm SINE Alu 1 147 0 2 1726 487 207 0 0 chrX 149616619 149616706 -17033590 - MT2B LTR ERVL -446 87 1 2 1726 664 331 122 34 chrX 149616831 149617275 -17033021 + MLT1F2 LTR MaLR 70 552 -8 2 1726 1517 266 101 48 chrX 149617510 149618095 -17032201 - Lx8 LINE L1 -2 7471 6856 2 1726 1442 77 22 0 chrX 149618268 149618450 -17031846 + B2_Mm2 SINE B2 1 186 -9 2 1726 444 118 0 0 chrX 149618591 149618659 -17031637 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 1726 412 279 78 24 chrX 149618735 149618968 -17031328 - B4 SINE B4 -8 284 4 2 1726 254 359 0 0 chrX 149618993 149619057 -17031239 - MLT1J LTR MaLR -201 311 248 2 1726 392 130 14 0 chrX 149619123 149619192 -17031104 + (TC)n Simple_repeat Simple_repeat 1 70 0 2 1726 1217 62 14 0 chrX 149619222 149619368 -17030928 - B1_Mus1 SINE Alu 0 148 1 2 1726 360 0 0 0 chrX 149619383 149619423 -17030873 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1726 216 105 0 0 chrX 149619560 149619574 -17030722 + (A)n Simple_repeat Simple_repeat 1 14 0 2 1726 1197 83 0 0 chrX 149619574 149619719 -17030577 + B1_Mus1 SINE Alu 4 148 0 2 1726 216 105 0 0 chrX 149619719 149619742 -17030554 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1726 1229 116 35 0 chrX 149620689 149620861 -17029435 + B2_Mm1t SINE B2 2 179 -14 2 1726 299 175 25 0 chrX 149620909 149620974 -17029322 + B2_Mm2 SINE B2 47 114 -102 2 1726 223 49 24 24 chrX 149620987 149621029 -17029267 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 2 1726 268 286 51 43 chrX 149621032 149621092 -17029204 - MTD LTR MaLR -44 375 315 2 1726 857 130 10 37 chrX 149621092 149621229 -17029067 + B1_Mus1 SINE Alu 1 137 -13 2 1726 216 0 0 0 chrX 149621229 149621253 -17029043 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 2 1726 857 124 8 37 chrX 149621253 149621266 -17029030 + B1_Mus1 SINE Alu 136 148 0 2 1726 1290 163 140 23 chrX 149621265 149621522 -17028774 - MTD LTR MaLR -130 289 3 2 1726 296 238 203 39 chrX 149621836 149621989 -17028307 - L1MC2 LINE L1 -206 6138 5961 2 1726 2240 131 9 0 chrX 149622217 149622538 -17027758 - Lx4A LINE L1 0 7058 6735 2 1726 1527 151 134 18 chrX 149622539 149622823 -17027473 + MTC LTR MaLR 97 413 -8 2 1726 291 114 0 0 chrX 149622840 149622884 -17027412 + (A)n Simple_repeat Simple_repeat 1 44 0 2 1726 221 314 11 23 chrX 149623005 149623093 -17027203 + L2 LINE L2 2397 2483 -936 2 1726 1139 135 67 0 chrX 149623312 149623490 -17026806 - B2_Mm2 SINE B2 -5 190 1 2 1726 629 286 75 79 chrX 149623571 149623825 -17026471 - MTEa LTR MaLR -31 348 96 2 1726 1409 226 49 61 chrX 149623918 149624303 -17025993 + MT2A LTR ERVL 129 517 -16 2 1726 1280 160 59 27 chrX 149624303 149624522 -17025774 - URR1A DNA MER1_type 0 226 1 2 1726 1409 226 49 61 chrX 149624522 149624546 -17025750 + MT2A LTR ERVL 518 533 0 2 1726 237 385 29 0 chrX 149624618 149624722 -17025574 + L2a LINE L2 3309 3415 -11 2 1726 945 149 101 6 chrX 149624944 149625113 -17025183 - B2_Mm2 SINE B2 -9 186 2 2 1726 324 127 0 0 chrX 149625571 149625626 -17024670 + (CAGA)n Simple_repeat Simple_repeat 2 56 0 2 1726 1542 205 196 83 chrX 149625867 149626346 -17023950 + MT2A LTR ERVL 1 533 0 2 1726 405 0 0 0 chrX 149626496 149626541 -17023755 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1726 226 305 47 35 chrX 149626859 149626944 -17023352 - MER87 LTR ERV1 -15 526 441 2 1726 476 248 93 8 chrX 149626956 149627074 -17023222 + ID_B1 SINE B4 94 221 -3 2 1726 351 240 119 46 chrX 149627124 149627233 -17023063 + B1F SINE Alu 33 149 0 2 1726 204 130 65 0 chrX 149627233 149627279 -17023017 + A-rich Low_complexity Low_complexity 1 49 0 2 1726 2333 121 15 6 chrX 149628043 149628377 -17021919 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1726 7031 38 3 19 chrX 149628379 149629242 -17021054 - IAPEz-int LTR ERVK -2 6479 5630 2 1726 11222 78 96 20 chrX 149629228 149632082 -17018214 - IAPEz-int LTR ERVK -3405 3076 8 2 1726 2333 121 15 6 chrX 149632082 149632416 -17017880 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1726 447 182 18 65 chrX 149632648 149632818 -17017478 - RMER17C LTR ERVK -137 273 112 2 1726 724 246 7 0 chrX 149633027 149633169 -17017127 - B1_Mur1 SINE Alu -5 144 2 2 1726 1097 304 136 62 chrX 149633213 149633649 -17016647 + L1_Mur3 LINE L1 4368 4859 -1021 2 1726 923 126 12 0 chrX 149633649 149633816 -17016480 + (GGGAGA)n Simple_repeat Simple_repeat 4 172 0 2 1726 958 73 116 52 chrX 149633824 149633997 -17016299 + B2_Mm2 SINE B2 2 185 -10 2 1726 1097 304 136 62 chrX 149633997 149634008 -17016288 + L1_Mur3 LINE L1 4867 4889 -991 2 1726 1506 70 5 5 chrX 149634008 149634194 -17016102 + B2_Mm1a SINE B2 2 187 -6 2 1726 1251 68 0 0 chrX 149634196 149634343 -17015953 + B1_Mm SINE Alu 1 147 0 2 1726 1097 304 136 62 chrX 149634343 149635288 -17015008 + L1_Mur3 LINE L1 4890 5872 -8 2 1726 517 246 41 34 chrX 149635554 149635701 -17014595 - Lx8 LINE L1 -134 7339 7192 2 1726 853 297 11 4 chrX 149635695 149635962 -17014334 + Lx8 LINE L1 6859 7127 -346 2 1726 1000 136 0 26 chrX 149636167 149636318 -17013978 - B1_Mur4 SINE Alu -2 148 2 2 1726 1529 64 37 5 chrX 149636343 149636532 -17013764 - B2_Mm2 SINE B2 0 195 1 2 1726 393 22 0 0 chrX 149636609 149636655 -17013641 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1726 1646 27 5 31 chrX 149637715 149637909 -17012387 - B2_Mm1a SINE B2 -4 189 1 2 1726 629 229 35 17 chrX 149638597 149638770 -17011526 - L1MA5A LINE L1 -441 5856 5681 2 1726 1205 280 49 23 chrX 149638779 149639265 -17011031 - L1M3 LINE L1 -1440 4700 4202 2 1726 1445 83 5 15 chrX 149639559 149639755 -17010541 + B2_Mm2 SINE B2 2 195 0 2 1726 917 320 74 22 chrX 149640185 149640629 -17009667 + RMER5 LTR ERV1 68 534 0 3 1726 1030 312 109 37 chrX 149640632 149641066 -17009230 + L1M4 LINE L1 9 459 -6083 3 1726 444 19 0 0 chrX 149641066 149641119 -17009177 + (CAAAA)n Simple_repeat Simple_repeat 3 55 0 3 1726 1030 312 109 37 chrX 149641119 149641380 -17008916 + L1M4 LINE L1 460 754 -5788 3 1726 602 51 13 0 chrX 149641411 149641490 -17008806 - B1_Mus2 SINE Alu 0 147 68 3 1726 2056 204 44 17 chrX 149641513 149641923 -17008373 - MTC LTR MaLR 0 421 1 3 1726 672 169 78 53 chrX 149641923 149642129 -17008167 - MTC-int LTR MaLR 0 1258 1048 3 1726 1242 55 0 7 chrX 149642225 149642372 -17007924 + B1_Mm SINE Alu 2 147 0 3 1726 316 207 32 84 chrX 149642375 149642470 -17007826 + B1_Mur4 SINE Alu 7 96 -54 3 1726 1139 186 58 5 chrX 149642536 149642741 -17007555 + B3 SINE B2 1 216 0 3 1726 26 30 0 0 chrX 149642743 149642776 -17007520 + AT_rich Low_complexity Low_complexity 1 33 0 3 1726 293 336 0 39 chrX 149642821 149642951 -17007345 - MER5B DNA MER1_type -4 174 50 3 1726 215 95 43 87 chrX 149643183 149643229 -17007067 + B3A SINE B2 29 72 -126 3 1726 207 114 0 0 chrX 149643281 149643316 -17006980 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 3 1726 204 200 0 0 chrX 149643471 149643506 -17006790 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 1726 838 248 82 0 chrX 149643718 149643909 -17006387 + B3 SINE B2 1 198 0 3 1726 631 328 49 12 chrX 149644030 149644277 -17006019 + RMER15 LTR ERVL 307 562 -13 3 1726 2413 202 29 105 chrX 149644388 149644968 -17005328 + RMER15 LTR ERVL 3 532 -43 3 1726 405 0 0 0 chrX 149644968 149645013 -17005283 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1726 2413 202 29 105 chrX 149645013 149645052 -17005244 + RMER15 LTR ERVL 533 575 0 3 1726 1253 62 0 0 chrX 149645227 149645372 -17004924 + B1_Mus2 SINE Alu 3 147 0 3 1726 348 111 0 0 chrX 149645385 149645439 -17004857 + (GGAA)n Simple_repeat Simple_repeat 3 56 0 3 1726 1156 85 62 92 chrX 149645515 149645710 -17004586 - B2_Mm1t SINE B2 -4 189 1 3 1726 907 159 88 0 chrX 149646035 149646205 -17004091 - URR1B DNA MER1_type -40 185 1 3 1726 1064 39 0 0 chrX 149646524 149646653 -17003643 - B1_Mm SINE Alu 0 147 19 3 1726 1054 190 208 4 chrX 149646818 149647087 -17003209 - MTD LTR MaLR -95 324 1 3 1726 317 295 82 74 chrX 149647656 149647912 -17002384 - L1MD LINE L1 -2168 3978 3721 3 1726 1399 259 27 18 chrX 149647978 149648155 -17002141 - Lx6 LINE L1 -574 6886 6755 3 1726 441 0 0 0 chrX 149648155 149648204 -17002092 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1726 1399 248 30 25 chrX 149648204 149648439 -17001857 - Lx6 LINE L1 -706 6754 6518 3 1726 1726 239 51 12 chrX 149648439 149648867 -17001429 - Lx6 LINE L1 -1188 6272 5830 3 1726 269 266 0 0 chrX 149648917 149648981 -17001315 + B3A SINE B2 5 68 -130 3 1726 1352 64 0 0 chrX 149649756 149649928 -17000368 - B2_Mm2 SINE B2 -22 173 2 3 1726 1126 363 21 9 chrX 149650254 149650691 -16999605 + L1M3a LINE L1 11 452 -5503 3 1726 293 96 58 0 chrX 149651344 149651396 -16998900 + GA-rich Low_complexity Low_complexity 1 55 0 3 1726 744 315 59 31 chrX 149651476 149651880 -16998416 - ERVL-int LTR ERVL -946 4811 4394 3 1726 636 271 24 72 chrX 149651880 149652087 -16998209 - B3A SINE B2 0 198 2 3 1726 744 315 59 31 chrX 149652087 149652105 -16998191 - ERVL-int LTR ERVL -1364 4393 4377 3 1726 611 230 79 47 chrX 149652563 149652777 -16997519 + RMER17C-int LTR ERVK 2654 2874 -364 3 1726 281 256 124 33 chrX 149652889 149653010 -16997286 + RMER17C-int LTR ERVK 3032 3163 -75 3 1726 1573 123 19 15 chrX 149653051 149653316 -16996980 + RMER10B LTR ERVL 1 266 -132 3 1726 333 0 0 0 chrX 149653316 149653353 -16996943 + (TCCC)n Simple_repeat Simple_repeat 1 37 0 3 1726 549 150 163 62 chrX 149653353 149653391 -16996905 + RMER10B LTR ERVL 194 228 -170 3 1726 1445 73 11 0 chrX 149653391 149653569 -16996727 - B2_Mm1t SINE B2 -13 180 1 3 1726 549 150 163 62 chrX 149653569 149653708 -16996588 + RMER10B LTR ERVL 229 389 -9 3 1726 261 0 0 0 chrX 149653708 149653737 -16996559 + (CA)n Simple_repeat Simple_repeat 1 29 0 3 1726 481 333 0 36 chrX 149653984 149654149 -16996147 + RSINE1 SINE B4 7 165 0 3 1726 1625 53 5 0 chrX 149654176 149654364 -16995932 + B2_Mm1t SINE B2 1 189 -4 3 1726 188 267 55 73 chrX 149654676 149654785 -16995511 + MIRb SINE MIR 98 204 -64 3 1726 368 196 8 136 chrX 149654883 149655001 -16995295 + MT2B LTR ERVL 155 257 -344 3 1726 786 173 0 35 chrX 149654906 149655050 -16995246 + B1_Mur4 SINE Alu 11 149 -1 3 1726 1143 96 7 0 chrX 149655052 149655198 -16995098 + B1_Mus2 SINE Alu 1 147 0 3 1726 227 54 27 0 chrX 149655201 149655238 -16995058 + (CAAAAA)n Simple_repeat Simple_repeat 3 40 0 3 1726 1267 80 28 22 chrX 149655374 149655553 -16994743 - B2_Mm2 SINE B2 -14 181 2 3 1726 333 239 0 0 chrX 149656295 149656362 -16993934 - B1_Mur1 SINE Alu -7 142 76 3 1726 1276 55 0 0 chrX 149656451 149656596 -16993700 - B1_Mus2 SINE Alu 0 147 3 3 1726 488 281 26 0 chrX 149656817 149656931 -16993365 - PB1D9 SINE Alu -2 118 2 3 1726 452 254 94 58 chrX 149657023 149657161 -16993135 - RSINE1 SINE B4 0 165 23 3 1726 1464 56 50 11 chrX 149657161 149657342 -16992954 - B2_Mm2 SINE B2 -6 189 2 3 1726 1736 187 67 99 chrX 149658121 149658554 -16991742 + MTD LTR MaLR 1 419 0 3 1726 585 310 70 6 chrX 149658613 149658785 -16991511 - B3A SINE B2 -15 183 1 3 1726 1349 102 23 0 chrX 149659606 149659783 -16990513 - B2_Mm2 SINE B2 -14 181 1 3 1726 267 325 25 0 chrX 149659915 149659995 -16990301 - ID4_ SINE ID -1 82 1 3 1726 23 0 0 0 chrX 149659995 149660018 -16990278 + AT_rich Low_complexity Low_complexity 1 23 0 3 1726 1088 15 8 0 chrX 149660069 149660199 -16990097 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 3 1726 1310 20 14 0 chrX 149660199 149660345 -16989951 - B1_Mur4 SINE Alu -2 148 1 3 1726 226 231 203 49 chrX 149660864 149660987 -16989309 + RLTR25A LTR ERVK 441 582 -521 3 1726 670 214 20 54 chrX 149660889 149661037 -16989259 + B1_Mur4 SINE Alu 6 148 -2 3 1726 830 221 19 7 chrX 149661180 149661335 -16988961 + RSINE1 SINE B4 9 165 0 3 1726 239 352 137 22 chrX 149661185 149661368 -16988928 + B3 SINE B2 13 216 0 3 1726 23 0 0 0 chrX 149661370 149661393 -16988903 + AT_rich Low_complexity Low_complexity 1 23 0 3 1726 447 19 0 0 chrX 149661875 149661927 -16988369 + (TTA)n Simple_repeat Simple_repeat 2 53 0 3 1726 245 27 0 51 chrX 149662064 149662103 -16988193 + (TTTTTG)n Simple_repeat Simple_repeat 4 40 0 3 1726 1320 41 0 0 chrX 149662104 149662250 -16988046 - B1_Mm SINE Alu -1 146 1 3 1726 7010 69 3 1 chrX 149662275 149663166 -16987130 - L1_Mus3 LINE L1 -35 6603 5711 3 1726 568 241 27 0 chrX 149663180 149663292 -16987004 + RSINE1 SINE B4 3 117 -48 3 1726 425 246 158 37 chrX 149663590 149663780 -16986516 + B4 SINE B4 57 269 -23 3 1726 1045 290 42 88 chrX 149664178 149664586 -16985710 + MTD-int LTR MaLR 431 819 -439 3 1726 1332 149 180 91 chrX 149664615 149664977 -16985319 + RMER4B LTR ERVK 17 410 -175 3 1726 1040 105 6 50 chrX 149664977 149665158 -16985138 + Lx LINE L1 6482 6654 0 3 1726 512 209 0 154 chrX 149665182 149665260 -16985036 - Lx5 LINE L1 -701 6349 6280 3 1726 1163 88 0 33 chrX 149665260 149665413 -16984883 + B1_Mus1 SINE Alu 1 148 0 3 1726 512 209 0 154 chrX 149665413 149665470 -16984826 - Lx5 LINE L1 -771 6279 6235 3 1726 505 203 119 0 chrX 149665472 149665590 -16984706 + Lx5 LINE L1 6919 7050 0 3 1726 483 191 38 0 chrX 149665639 149665744 -16984552 + MTD-int LTR MaLR 1150 1258 0 3 1726 1668 241 41 20 chrX 149665748 149666141 -16984155 + MTD LTR MaLR 5 405 -14 3 1726 673 348 60 10 chrX 149666199 149666597 -16983699 - L2 LINE L2 -1066 2353 1936 3 1726 270 390 98 58 chrX 149666987 149667314 -16982982 - MER102b DNA MER1_type -1 340 1 3 1726 442 212 109 166 chrX 149667625 149668094 -16982202 - RMER10A LTR ERVL 0 442 1 3 1726 180 111 0 0 chrX 149668382 149668409 -16981887 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 3 1726 348 90 134 0 chrX 149668419 149668486 -16981810 - B1_Mur3 SINE Alu 0 149 74 3 1726 450 0 0 0 chrX 149668509 149668559 -16981737 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 1726 255 31 0 0 chrX 149668749 149668781 -16981515 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3 1726 832 85 0 17 chrX 149668781 149668892 -16981404 - B1_Mus1 SINE Alu -9 139 29 3 1726 417 342 16 31 chrX 149668986 149669179 -16981117 - MIR SINE MIR -62 200 11 3 1726 198 103 0 0 chrX 149669179 149669208 -16981088 + (TTTTC)n Simple_repeat Simple_repeat 3 31 0 3 1726 1250 34 0 0 chrX 149669208 149669355 -16980941 - B1_Mm SINE Alu 0 147 1 3 1726 1233 113 5 21 chrX 149669618 149669807 -16980489 + B2_Mm1t SINE B2 2 187 -6 3 1726 1189 68 0 0 chrX 149669822 149669970 -16980326 + B1_Mus1 SINE Alu 1 148 0 3 1726 927 129 14 0 chrX 149670222 149670361 -16979935 + B1_Mur4 SINE Alu 1 141 -9 3 1726 850 193 193 0 chrX 149670570 149670751 -16979545 + B3 SINE B2 1 216 0 3 1726 1094 51 7 0 chrX 149670772 149670909 -16979387 + B1_Mus1 SINE Alu 1 138 -10 3 1726 356 0 0 22 chrX 149670909 149670954 -16979342 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 1726 286 317 188 6 chrX 149671272 149671453 -16978843 - L2 LINE L2 -612 2807 2594 3 1726 275 59 30 0 chrX 149671466 149671511 -16978785 + B1_Mm SINE Alu 66 147 0 3 1726 204 40 0 0 chrX 149671511 149671536 -16978760 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1726 531 239 0 0 chrX 149673678 149674102 -16976194 + GA-rich Low_complexity Low_complexity 1 424 0 3 1726 318 91 0 108 chrX 149674103 149674177 -16976119 + (CAGAGA)n Simple_repeat Simple_repeat 1 66 0 3 1726 557 187 0 45 chrX 149674197 149674309 -16975987 + B1_Mus2 SINE Alu 40 146 -1 3 1726 272 158 51 31 chrX 149675529 149675627 -16974669 + CT-rich Low_complexity Low_complexity 6 105 0 3 1726 201 351 61 9 chrX 149675969 149676084 -16974212 - L2a LINE L2 -240 3186 3066 3 1726 253 307 79 0 chrX 149676123 149676224 -16974072 + PB1D10 SINE Alu 2 110 -7 4 1726 312 351 22 71 chrX 149677283 149677467 -16972829 - MER5B DNA MER1_type -3 175 1 4 1726 221 290 0 14 chrX 149677479 149677549 -16972747 + MER5A DNA MER1_type 5 73 -116 4 1726 1236 35 7 0 chrX 149677552 149677697 -16972599 + B1_Mus1 SINE Alu 3 148 0 4 1726 925 130 7 27 chrX 149677735 149677885 -16972411 + B1_Mur3 SINE Alu 1 147 -2 4 1726 213 268 171 0 chrX 149677885 149677967 -16972329 + MER5A DNA MER1_type 60 155 -34 4 1726 1054 69 20 20 chrX 149678155 149678303 -16971993 - B1_Mus1 SINE Alu 0 148 1 4 1726 382 279 126 0 chrX 149678334 149678445 -16971851 - MIR SINE MIR -71 191 67 4 1726 510 293 92 43 chrX 149678559 149678766 -16971530 - MIR SINE MIR -25 237 21 4 1726 1275 251 55 39 chrX 149678790 149679154 -16971142 + ORR1D2 LTR MaLR 1 370 0 4 1726 190 356 108 5 chrX 149679253 149679456 -16970840 + L2 LINE L2 1977 2200 -1219 4 1726 505 278 97 71 chrX 149679793 149680173 -16970123 + MLT1B LTR MaLR 1 390 0 4 1726 518 274 47 27 chrX 149680513 149680663 -16969633 - RMER10B LTR ERVL 0 398 246 4 1726 33 66 0 0 chrX 149681381 149681442 -16968854 + AT_rich Low_complexity Low_complexity 1 61 0 4 1726 612 283 91 19 chrX 149681513 149681833 -16968463 - L1MA6 LINE L1 -114 6186 5844 4 1726 401 222 47 79 chrX 149681885 149682012 -16968284 + MT2B LTR ERVL 156 278 -323 4 1726 1052 93 0 0 chrX 149681899 149682039 -16968257 + B1_Mus1 SINE Alu 9 148 0 4 1726 302 0 0 26 chrX 149682044 149682083 -16968213 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 4 1726 738 148 101 29 chrX 149682089 149682228 -16968068 - B1_Mur2 SINE Alu 0 149 1 4 1726 29 0 0 62 chrX 149682230 149682278 -16968018 + AT_rich Low_complexity Low_complexity 1 45 0 4 1726 686 237 0 0 chrX 149682291 149682430 -16967866 - B1_Mur1 SINE Alu -5 144 6 4 1726 269 263 22 132 chrX 149682321 149682457 -16967839 - MT2B LTR ERVL -337 264 144 4 1726 1051 233 112 104 chrX 149682485 149683304 -16966992 - L1MA6 LINE L1 -913 5230 4405 4 1726 281 89 22 0 chrX 149683355 149683400 -16966896 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1726 817 193 190 16 chrX 149683461 149683645 -16966651 + B3 SINE B2 1 216 0 4 1726 219 103 0 0 chrX 149683725 149683764 -16966532 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 4 1726 271 289 174 0 chrX 149683873 149683994 -16966302 - MIRb SINE MIR -11 257 116 4 215 2224 138 10 35 chrX 149683995 149684476 -16965820 - RMER6A LTR ERVK -245 511 1 4 1727 226 236 0 18 chrX 149684677 149684733 -16965563 + 4.5SRNA scRNA scRNA 32 86 -8 4 1727 520 172 0 11 chrX 149684685 149684779 -16965517 + B1_Mus2 SINE Alu 42 134 -13 4 1727 293 0 27 0 chrX 149684779 149684816 -16965480 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 4 1727 614 211 17 9 chrX 149684983 149685098 -16965198 - B1_Mur2 SINE Alu -2 147 32 4 1727 235 323 60 23 chrX 149685160 149685293 -16965003 + ORR1D2 LTR MaLR 205 342 -28 4 1727 227 204 0 0 chrX 149685776 149685825 -16964471 + T-rich Low_complexity Low_complexity 1 49 0 4 1727 215 300 0 16 chrX 149686077 149686138 -16964158 - MIRc SINE MIR -148 120 61 4 1727 1130 45 0 0 chrX 149687729 149687863 -16962433 + B1_Mm SINE Alu 1 134 -13 4 1727 202 0 59 29 chrX 149687863 149687897 -16962399 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 4 1727 676 300 131 50 chrX 149688124 149688506 -16961790 - MLT1C LTR MaLR -33 434 22 4 1727 975 311 71 137 chrX 149688518 149689122 -16961174 - MLT1C-int LTR MaLR -4 1367 804 4 1727 25 65 0 0 chrX 149689406 149689452 -16960844 + AT_rich Low_complexity Low_complexity 1 46 0 4 1727 199 371 34 20 chrX 149689470 149689616 -16960680 + L2a LINE L2 3267 3414 -12 4 1727 1015 183 67 10 chrX 149689683 149689876 -16960420 - B3 SINE B2 0 216 13 4 1727 212 214 48 0 chrX 149690282 149690324 -16959972 - MIRb SINE MIR -12 256 213 4 1727 222 231 0 0 chrX 149690292 149690331 -16959965 - MIRm SINE MIR -26 250 212 4 1727 198 0 0 0 chrX 149690589 149690611 -16959685 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1727 227 221 68 81 chrX 149691210 149691284 -16959012 - L2a LINE L2 -62 3364 3292 4 1727 293 184 39 13 chrX 149691293 149691370 -16958926 + CT-rich Low_complexity Low_complexity 2 80 0 4 1727 599 254 0 16 chrX 149691701 149691825 -16958471 - RSINE1 SINE B4 -33 132 11 4 1727 305 314 41 55 chrX 149692152 149692297 -16957999 - MER5B DNA MER1_type -33 145 3 4 1727 362 295 11 0 chrX 149692497 149692592 -16957704 - MLT1D LTR MaLR 0 505 410 4 1727 1168 75 0 0 chrX 149692618 149692765 -16957531 - B1_Mm SINE Alu 0 147 1 4 1727 323 279 81 13 chrX 149692815 149692964 -16957332 - MLT1D LTR MaLR -290 215 57 4 1727 282 360 70 0 chrX 149693048 149693134 -16957162 - MIRc SINE MIR -159 109 18 4 1727 3411 42 11 9 chrX 149693201 149693636 -16956660 + L1_Mus1 LINE L1 6132 6567 0 4 1727 309 327 50 38 chrX 149693659 149693818 -16956478 - L2c LINE L2 -5 3382 3222 4 1727 1477 137 21 0 chrX 149693971 149694204 -16956092 + Lx4A LINE L1 6631 6868 -190 4 1727 1161 21 0 0 chrX 149694219 149694360 -16955936 - B1_Mus2 SINE Alu 0 147 7 4 1727 626 181 98 86 chrX 149694225 149694388 -16955908 - B4 SINE B4 -72 220 56 4 1727 542 313 137 0 chrX 149694497 149694781 -16955515 + Ricksha_0 DNA MuDR 336 658 -1075 4 1727 256 214 57 0 chrX 149694824 149694894 -16955402 + L1M4 LINE L1 5743 5816 -362 4 1727 311 375 28 0 chrX 149695304 149695480 -16954816 - L1M3 LINE L1 -391 5780 5600 4 1727 256 226 109 36 chrX 149695496 149695634 -16954662 - Lx7 LINE L1 -15 7681 7534 4 1727 232 240 52 0 chrX 149696989 149697085 -16953211 - MER58B DNA MER1_type -148 193 93 4 1727 258 193 18 0 chrX 149697220 149697277 -16953019 - RMER5 LTR ERV1 0 534 477 4 1727 1005 244 70 39 chrX 149697291 149697649 -16952647 - RMER5 LTR ERV1 -128 406 38 4 1727 674 290 116 52 chrX 149697699 149698182 -16952114 - L1MA9 LINE L1 -352 6662 6149 4 1727 225 220 23 0 chrX 149698234 149698295 -16952001 + PB1D7 SINE Alu 74 149 0 4 1727 382 315 69 36 chrX 149698516 149698878 -16951418 - L1MA9 LINE L1 -4421 2428 2055 4 1727 218 306 76 67 chrX 149699068 149699096 -16951200 - PB1D10 SINE Alu -11 106 2 4 1727 285 229 0 79 chrX 149699096 149699172 -16951124 - 4.5SRNA scRNA scRNA -24 70 1 4 1727 367 340 35 7 chrX 149699300 149699445 -16950851 - B1F SINE Alu 0 149 1 4 1727 251 275 0 42 chrX 149699383 149699455 -16950841 - B4A SINE B4 -146 146 78 4 1727 450 173 105 9 chrX 149699470 149699575 -16950721 - Lx7 LINE L1 -829 6867 6753 4 1727 3395 121 45 12 chrX 149699820 149700396 -16949900 - RMER6A LTR ERVK 0 756 162 4 1727 6765 182 36 35 chrX 149700397 149702876 -16947420 - Lx6 LINE L1 -293 7167 4678 4 1727 283 130 0 0 chrX 149702870 149702916 -16947380 - Lx6 LINE L1 -2431 3449 3404 4 1727 2050 231 98 2 chrX 149702933 149703601 -16946695 - Lx6 LINE L1 -7097 631 17 4 1727 21 0 0 0 chrX 149703614 149703635 -16946661 + AT_rich Low_complexity Low_complexity 1 21 0 4 1727 1085 103 0 0 chrX 149703886 149704032 -16946264 + B1_Mus1 SINE Alu 3 148 0 4 1727 34 24 0 0 chrX 149704074 149704115 -16946181 + AT_rich Low_complexity Low_complexity 1 41 0 4 1727 370 324 67 82 chrX 149704213 149704367 -16945929 - B4A SINE B4 -1 291 139 4 1727 225 0 0 0 chrX 149704367 149704392 -16945904 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1727 1148 58 0 0 chrX 149704392 149704530 -16945766 - B1_Mm SINE Alu -9 138 1 4 1727 370 324 67 82 chrX 149704530 149704643 -16945653 - B4A SINE B4 -154 138 28 4 1727 21 36 0 0 chrX 149704643 149704671 -16945625 + AT_rich Low_complexity Low_complexity 1 28 0 4 1727 4169 198 82 15 chrX 149704675 149705703 -16944593 - Lx3C LINE L1 -18 6958 5864 4 1727 779 279 141 4 chrX 149705783 149706017 -16944279 + B4A SINE B4 8 273 -19 4 1727 194 439 21 14 chrX 149706112 149706253 -16944043 - L2b LINE L2 -305 3070 2929 4 1727 1018 144 194 0 chrX 149706619 149706799 -16943497 - B3 SINE B2 0 216 2 4 1727 1227 34 0 13 chrX 149706857 149707006 -16943290 - B1_Mus2 SINE Alu 0 147 1 4 1727 424 321 30 41 chrX 149707788 149707957 -16942339 - LTR33 LTR ERVL -340 175 9 4 1727 461 340 103 50 chrX 149708088 149708429 -16941867 - ORR1E LTR MaLR 0 359 1 4 1727 3929 66 19 8 chrX 149708962 149709481 -16940815 - L1Md_F2 LINE L1 -3 6579 6055 4 1727 466 283 15 23 chrX 149709507 149709637 -16940659 - B1F SINE Alu -1 148 20 4 1727 884 214 126 77 chrX 149709819 149710128 -16940168 - ORR1E LTR MaLR -2 357 6 4 1727 476 269 56 20 chrX 149710446 149710643 -16939653 + L1M2 LINE L1 5419 5622 -669 4 1727 21 0 0 0 chrX 149710796 149710817 -16939479 + AT_rich Low_complexity Low_complexity 1 21 0 4 1727 243 0 0 0 chrX 149711016 149711043 -16939253 + (TTA)n Simple_repeat Simple_repeat 3 29 0 4 1727 446 309 55 8 chrX 149712064 149712191 -16938105 - B1F1 SINE Alu -4 145 13 4 1727 359 397 7 0 chrX 149712065 149712206 -16938090 - ID_B1 SINE B4 -4 220 79 4 1727 1212 68 0 0 chrX 149712377 149712525 -16937771 + B1_Mus1 SINE Alu 1 148 0 4 1727 273 149 0 0 chrX 149712527 149712594 -16937702 + (CAAAAA)n Simple_repeat Simple_repeat 3 69 0 4 1727 396 152 0 0 chrX 149712594 149712653 -16937643 - B3 SINE B2 -155 61 3 4 1727 452 18 18 0 chrX 149712802 149712859 -16937437 + (TTATA)n Simple_repeat Simple_repeat 5 62 0 4 1727 234 268 18 149 chrX 149713363 149713477 -16936819 - MTE2b LTR MaLR -280 99 1 4 1727 870 238 163 55 chrX 149713708 149714169 -16936127 - Lx7 LINE L1 0 7696 7186 4 1727 433 323 65 82 chrX 149714238 149714544 -16935752 - L1MDa LINE L1 -4866 1767 1450 4 1727 180 0 0 0 chrX 149714544 149714564 -16935732 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1727 1120 75 0 0 chrX 149714564 149714710 -16935586 - B1_Mus1 SINE Alu -2 146 1 4 1727 433 323 65 82 chrX 149714710 149714912 -16935384 - L1MDa LINE L1 -5184 1449 1268 4 1727 4209 58 0 0 chrX 149714912 149715428 -16934868 - L1_Mus1 LINE L1 0 6567 6052 5 1727 433 323 65 82 chrX 149715428 149715457 -16934839 - L1MDa LINE L1 -5366 1267 1238 4 1727 1049 72 0 14 chrX 149715471 149715611 -16934685 - B1_Mm SINE Alu -9 138 1 5 1727 1042 75 0 36 chrX 149715720 149715887 -16934409 - L1_Mus2 LINE L1 0 6566 6406 5 1727 456 275 92 26 chrX 149716346 149716499 -16933797 + RSINE1 SINE B4 3 165 0 5 1727 1185 41 7 7 chrX 149716597 149716744 -16933552 + B1_Mus2 SINE Alu 1 147 0 5 1727 225 0 0 0 chrX 149716756 149716781 -16933515 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 5 1727 1641 166 43 78 chrX 149716909 149717057 -16933239 + ORR1B2 LTR MaLR 1 148 -219 5 1727 210 37 0 0 chrX 149717057 149717084 -16933212 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 5 1727 1641 166 43 78 chrX 149717084 149717307 -16932989 + ORR1B2 LTR MaLR 149 359 -8 5 1727 25 31 0 0 chrX 149717476 149717508 -16932788 + AT_rich Low_complexity Low_complexity 1 32 0 5 1727 303 296 88 36 chrX 149718249 149718523 -16931773 - L1MC2 LINE L1 -101 6243 5956 5 1727 244 188 31 0 chrX 149718575 149718639 -16931657 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 1727 861 150 160 43 chrX 149719952 149720140 -16930156 - B3 SINE B2 -4 212 3 5 1727 21 0 0 0 chrX 149720519 149720540 -16929756 + AT_rich Low_complexity Low_complexity 1 21 0 5 1727 342 0 0 0 chrX 149720655 149720693 -16929603 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 5 1727 1111 282 90 3 chrX 149720848 149721236 -16929060 - Lx8 LINE L1 -142 7331 6910 5 1727 284 289 116 82 chrX 149721319 149721342 -16928954 + B4 SINE B4 68 219 -73 5 1727 766 121 105 0 chrX 149721342 149721466 -16928830 + B1_Mur4 SINE Alu 7 143 -7 5 1727 1175 43 0 0 chrX 149721942 149722083 -16928213 + B1_Mus2 SINE Alu 2 142 -5 5 1727 623 306 62 81 chrX 149722112 149722677 -16927619 - L1ME3A LINE L1 -43 6130 5577 5 1727 1239 48 0 0 chrX 149722821 149722968 -16927328 - B1_Mus2 SINE Alu 0 147 1 5 1727 2143 151 91 11 chrX 149722995 149723382 -16926914 + MTC LTR MaLR 1 390 -31 5 1727 251 391 5 52 chrX 149723388 149723582 -16926714 - L4 LINE RTE -847 1182 998 5 1727 261 0 0 0 chrX 149723695 149723724 -16926572 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1727 695 329 96 19 chrX 149723752 149724232 -16926064 + L1M4 LINE L1 67 583 -5959 5 1727 339 86 0 17 chrX 149724673 149724732 -16925564 + L1Md_F3 LINE L1 6518 6575 -9 5 1727 1042 97 216 26 chrX 149724774 149724964 -16925332 - URR1A DNA MER1_type 0 226 1 5 1727 304 246 16 56 chrX 149724980 149725084 -16925212 + L1M3 LINE L1 4518 4622 -1518 5 1727 4392 41 0 0 chrX 149725084 149725600 -16924696 + L1Md_F2 LINE L1 6066 6581 -1 5 1727 304 246 16 56 chrX 149725600 149725620 -16924676 + L1M3 LINE L1 4623 4637 -1503 5 1727 1115 92 0 0 chrX 149725620 149725761 -16924535 + B1_Mm SINE Alu 1 141 -6 5 1727 217 0 29 29 chrX 149725764 149725798 -16924498 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1727 1032 71 155 0 chrX 149725821 149725976 -16924320 + B2_Mm1t SINE B2 1 179 -14 5 1727 346 139 301 5 chrX 149725980 149726112 -16924184 + B2_Mm2 SINE B2 17 189 -6 5 1727 297 0 0 0 chrX 149726473 149726506 -16923790 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1727 237 211 0 0 chrX 149726506 149726558 -16923738 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1727 1218 307 97 33 chrX 149726626 149726893 -16923403 - Lx8 LINE L1 -1005 6468 6189 5 1727 243 0 0 0 chrX 149726893 149726920 -16923376 + (TC)n Simple_repeat Simple_repeat 1 27 0 5 1727 1931 242 92 26 chrX 149726920 149727760 -16922536 - Lx8 LINE L1 -1285 6188 5274 5 1727 953 109 55 8 chrX 149727766 149728016 -16922280 + ORR1A3 LTR MaLR 1 356 -11 5 1727 692 188 81 40 chrX 149728048 149728071 -16922225 - Lx8 LINE L1 -602 5245 5224 5 1727 1276 27 0 0 chrX 149728071 149728218 -16922078 - B1_Mus2 SINE Alu 0 147 1 5 1727 692 188 81 40 chrX 149728218 149728416 -16921880 - Lx8 LINE L1 -624 5223 5015 5 1727 2379 259 99 16 chrX 149728525 149728651 -16921645 - Lx8 LINE L1 -2913 2934 2814 5 1727 717 214 8 8 chrX 149728651 149728783 -16921513 + B1_Mur4 SINE Alu 3 134 -16 5 1727 2379 259 99 16 chrX 149728783 149729654 -16920642 - Lx8 LINE L1 -3034 2813 1856 5 1727 1146 42 14 7 chrX 149729718 149729861 -16920435 - B1_Mus2 SINE Alu -2 145 2 5 1727 237 224 0 121 chrX 149729861 149729927 -16920369 - B1_Mur3 SINE Alu -17 132 75 5 1727 1145 70 0 0 chrX 149730077 149730220 -16920076 - B1_Mus1 SINE Alu -5 143 1 5 1727 310 243 27 13 chrX 149730333 149730408 -16919888 - MER113A DNA MER1_type -232 82 7 5 1727 642 39 0 0 chrX 149730645 149730722 -16919574 + B1_Mur4 SINE Alu 65 141 -9 5 1727 315 0 0 0 chrX 149730722 149730757 -16919539 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1727 267 333 0 77 chrX 149731060 149731151 -16919145 - B4A SINE B4 0 292 209 5 1727 728 247 6 25 chrX 149731196 149731354 -16918942 + B3 SINE B2 56 210 -6 5 1727 282 184 86 19 chrX 149731360 149731465 -16918831 + Lx6 LINE L1 7320 7431 -29 5 1727 395 329 59 34 chrX 149731845 149732169 -16918127 + L1_Mur1 LINE L1 1700 2031 -3852 5 1727 729 304 72 15 chrX 149732148 149732686 -16917610 + Lx7 LINE L1 3690 4256 -1624 5 1727 700 200 0 8 chrX 149732734 149732860 -16917436 - B1_Mur2 SINE Alu -2 147 23 5 1727 2540 292 36 55 chrX 149732860 149733974 -16916322 - L1_Mur3 LINE L1 -628 5252 4157 5 1727 1166 82 0 0 chrX 149733974 149734120 -16916176 - B1_Mus2 SINE Alu 0 147 2 5 1727 2540 292 36 55 chrX 149734120 149734305 -16915991 - L1_Mur3 LINE L1 -1724 4156 3978 5 1727 552 68 0 0 chrX 149734333 149734406 -16915890 + (TCC)n Simple_repeat Simple_repeat 2 74 0 5 1727 1145 88 0 0 chrX 149734407 149734555 -16915741 - B1_Mus1 SINE Alu 0 148 1 5 1727 1882 289 110 42 chrX 149734562 149736155 -16914141 - L1_Rod LINE L1 -2586 3261 1561 5 1727 1262 94 28 0 chrX 149736225 149736405 -16913891 - B2_Mm1t SINE B2 -8 185 1 5 1727 408 99 0 0 chrX 149736470 149736541 -16913755 + (TC)n Simple_repeat Simple_repeat 2 72 0 5 1727 1149 71 0 0 chrX 149736543 149736683 -16913613 - B1_Mus2 SINE Alu -7 140 1 5 1727 2632 308 87 16 chrX 149736757 149737898 -16912398 - Lx8 LINE L1 -185 7288 6067 5 1727 1392 70 16 0 chrX 149737958 149738143 -16912153 - B2_Mm2 SINE B2 -6 189 2 5 1727 1568 253 25 17 chrX 149738204 149738906 -16911390 + Lx7 LINE L1 5459 6174 -1522 5 1727 1650 184 42 36 chrX 149739083 149739439 -16910857 - ORR1D1 LTR MaLR 0 374 17 5 1727 383 294 27 34 chrX 149739876 149740024 -16910272 + B1F SINE Alu 3 149 0 5 1727 281 269 0 29 chrX 149740026 149740095 -16910201 + BC1_Mm scRNA scRNA 4 70 -82 5 1727 2014 116 20 70 chrX 149740108 149740452 -16909844 + ORR1A2 LTR MaLR 1 327 0 5 1727 722 233 99 62 chrX 149740529 149740721 -16909575 + B3 SINE B2 18 216 0 5 1727 348 43 0 0 chrX 149740746 149740792 -16909504 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 5 1727 979 78 120 0 chrX 149740792 149740934 -16909362 - B2_Mm1t SINE B2 -33 160 2 5 1727 418 302 36 75 chrX 149741029 149741308 -16908988 + MT2A LTR ERVL 106 373 -160 5 1727 267 77 0 0 chrX 149741381 149741420 -16908876 - Lx5 LINE L1 -1215 5835 5797 5 1727 254 79 0 0 chrX 149741424 149741462 -16908834 + Lx5 LINE L1 7010 7047 -3 5 1727 394 250 24 57 chrX 149741459 149741705 -16908591 - L1MA9 LINE L1 -23 6289 6052 5 1727 706 164 15 15 chrX 149742147 149742283 -16908013 - B1_Mus2 SINE Alu -1 146 11 5 1727 306 259 46 112 chrX 149742190 149742342 -16907954 - MT2B LTR ERVL -343 258 117 5 1727 687 249 66 66 chrX 149742367 149742655 -16907641 + Lx9 LINE L1 6957 7244 -400 5 1727 1048 304 9 22 chrX 149742739 149743058 -16907238 - MLT1A0 LTR MaLR -50 315 1 5 1727 829 192 14 0 chrX 149743072 149743218 -16907078 - B1_Mus1 SINE Alu 0 148 1 5 1727 273 267 48 29 chrX 149743265 149743369 -16906927 + MIR SINE MIR 156 261 -1 5 1727 755 341 101 5 chrX 149743544 149743912 -16906384 - Lx8 LINE L1 -26 7447 7045 5 1727 337 250 53 93 chrX 149745922 149746072 -16904224 - ID_B1 SINE B4 0 224 81 5 1727 222 286 18 18 chrX 149746460 149746517 -16903779 + MIRb SINE MIR 51 107 -161 5 1727 455 278 23 6 chrX 149746524 149746701 -16903595 - L1M2 LINE L1 -2349 3794 3615 5 1727 232 254 148 74 chrX 149746683 149746913 -16903383 + L1M3 LINE L1 4978 5224 -916 5 1727 953 197 80 0 chrX 149747011 149747199 -16903097 + B3 SINE B2 3 205 -11 5 1727 334 229 95 0 chrX 149747213 149747318 -16902978 - Lx9 LINE L1 -636 7008 6894 5 1727 609 260 125 34 chrX 149747318 149747669 -16902627 + L1M3 LINE L1 5320 5702 -598 5 1727 396 0 0 0 chrX 149747683 149747727 -16902569 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1727 432 256 108 8 chrX 149748262 149748392 -16901904 + B1F SINE Alu 6 148 -1 5 1727 594 321 0 0 chrX 149748394 149748525 -16901771 + RSINE1 SINE B4 4 134 -31 5 1727 360 0 0 0 chrX 149748561 149748601 -16901695 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1727 181 269 327 0 chrX 149748763 149748867 -16901429 - MIR SINE MIR -122 140 3 5 1727 1501 276 112 38 chrX 149749329 149749855 -16900441 - Lx6 LINE L1 0 7460 6900 5 1727 4833 128 16 12 chrX 149749855 149750628 -16899668 + Lx LINE L1 5873 6648 -6 5 1727 1501 276 112 38 chrX 149750628 149750756 -16899540 - Lx6 LINE L1 -561 6899 6758 5 1727 1244 28 7 0 chrX 149750774 149750919 -16899377 - B1_Mm SINE Alu -1 146 1 5 1727 810 138 33 46 chrX 149751075 149751227 -16899069 - B1_Mur4 SINE Alu 0 150 1 5 1727 255 324 13 26 chrX 149751565 149751641 -16898655 - ID2 SINE ID -6 77 3 5 1727 237 108 0 0 chrX 149751747 149751784 -16898512 + (TATATG)n Simple_repeat Simple_repeat 5 41 0 5 1727 245 352 213 19 chrX 149751937 149752365 -16897931 + L2 LINE L2 2482 2992 -427 5 1727 339 267 245 29 chrX 149752870 149753009 -16897287 + B4A SINE B4 1 169 -123 5 1727 250 279 15 0 chrX 149753649 149753717 -16896579 - ID4_ SINE ID -10 73 5 5 1727 220 253 13 26 chrX 149753721 149753798 -16896498 + T-rich Low_complexity Low_complexity 5 80 0 5 1727 201 147 0 0 chrX 149753934 149753968 -16896328 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1727 1111 79 0 0 chrX 149753980 149754119 -16896177 - B1_Mus2 SINE Alu -8 139 1 6 1727 1850 158 82 36 chrX 149754125 149754539 -16895757 - RMER1B Other Other 0 1066 634 6 1727 252 86 0 0 chrX 149754643 149754678 -16895618 + (TCC)n Simple_repeat Simple_repeat 3 37 0 6 1727 180 0 0 0 chrX 149754707 149754727 -16895569 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 6 1727 2368 157 92 8 chrX 149754753 149755280 -16895016 - Lx4A LINE L1 -72 6904 6328 6 1727 524 293 92 45 chrX 149755379 149755787 -16894509 - L1M2 LINE L1 -3261 2882 2437 6 1727 555 118 0 0 chrX 149755787 149755872 -16894424 + (TA)n Simple_repeat Simple_repeat 2 86 0 6 1727 1167 58 0 0 chrX 149755875 149756014 -16894282 - B1_Mus2 SINE Alu -6 141 3 6 1727 524 293 92 45 chrX 149756014 149756202 -16894094 - L1M2 LINE L1 -3707 2436 2254 6 1727 1620 247 77 3 chrX 149756219 149756609 -16893687 - MTD LTR MaLR 0 419 1 6 1727 215 31 0 30 chrX 149756753 149756786 -16893510 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 6 1727 224 337 21 43 chrX 149756844 149756937 -16893359 + L2 LINE L2 1955 2045 -1374 6 1727 216 0 0 0 chrX 149756993 149757017 -16893279 + (TTTTTG)n Simple_repeat Simple_repeat 6 29 0 6 1727 204 331 126 37 chrX 149757017 149757208 -16893088 + L2 LINE L2 2142 2349 -1070 6 1727 242 288 131 33 chrX 149757261 149757383 -16892913 + L2 LINE L2 2457 2590 -829 6 1727 399 243 76 45 chrX 149757833 149758031 -16892265 - RLTR42-int LTR ERVK -1062 4460 4257 6 1727 1110 76 7 0 chrX 149758401 149758546 -16891750 - B1_Mus2 SINE Alu 0 147 2 6 1727 298 57 38 0 chrX 149758559 149758612 -16891684 + (TA)n Simple_repeat Simple_repeat 2 56 0 6 1727 4189 50 0 2 chrX 149758612 149759115 -16891181 - L1Md_F2 LINE L1 -18 6564 6063 6 1727 447 68 0 0 chrX 149759561 149759620 -16890676 + (TCC)n Simple_repeat Simple_repeat 3 61 0 6 1727 992 55 0 0 chrX 149759986 149760114 -16890182 + B1_Mus1 SINE Alu 14 141 -7 6 1727 198 0 0 0 chrX 149760115 149760137 -16890159 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 6 1727 2366 126 83 40 chrX 149760385 149760830 -16889466 - RMER4A LTR ERVK -2 464 1 6 1727 353 20 41 0 chrX 149760874 149760923 -16889373 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 6 1727 250 177 11 102 chrX 149761555 149761584 -16888712 + L1_Rod LINE L1 3247 3274 -2573 6 1727 2953 29 3 0 chrX 149761584 149761929 -16888367 + ORR1A0 LTR MaLR 1 346 0 6 1727 14238 47 3 2 chrX 149761929 149763718 -16886578 + ORR1A0-int LTR MaLR 1 1792 0 6 1727 2723 30 45 0 chrX 149763718 149764049 -16886247 + ORR1A0 LTR MaLR 1 346 0 6 1727 250 177 11 102 chrX 149764049 149764105 -16886191 + L1_Rod LINE L1 3275 3324 -2523 6 1727 634 249 18 22 chrX 149764113 149764267 -16886029 + B3 SINE B2 39 208 -8 6 1727 266 257 61 9 chrX 149764294 149764408 -16885888 + L1M2 LINE L1 4023 4142 -2001 6 1727 754 264 55 5 chrX 149764457 149764659 -16885637 + B3 SINE B2 1 212 -4 6 1727 405 0 0 0 chrX 149764766 149764811 -16885485 + (TA)n Simple_repeat Simple_repeat 1 45 0 6 1727 629 284 9 33 chrX 149764933 149765148 -16885148 - Lx8 LINE L1 -460 7013 6804 6 1727 315 225 0 81 chrX 149765146 149765233 -16885063 + Lx8 LINE L1 7273 7352 -121 6 1727 1170 241 33 13 chrX 149765395 149765698 -16884598 + Lx8 LINE L1 6192 6500 -973 6 1727 1378 215 126 3 chrX 149765753 149766126 -16884170 + Lx8 LINE L1 7050 7468 -5 6 1727 285 246 35 17 chrX 149766151 149766267 -16884029 + Lx8 LINE L1 7354 7471 -2 6 1727 198 0 0 0 chrX 149766369 149766391 -16883905 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 6 1727 1087 59 0 0 chrX 149766391 149766526 -16883770 - B1_Mus1 SINE Alu -13 135 1 6 1727 687 253 191 20 chrX 149766859 149767251 -16883045 - L1MA9 LINE L1 -376 5936 5478 6 1727 8993 81 26 26 chrX 149767347 149768307 -16881989 - Lx3_Mus LINE L1 0 7009 6051 6 1727 1155 36 0 0 chrX 149768307 149768447 -16881849 + (TCCC)n Simple_repeat Simple_repeat 1 140 0 6 1727 8993 81 26 26 chrX 149768447 149768850 -16881446 - Lx3_Mus LINE L1 -959 6050 5648 6 1727 890 326 11 43 chrX 149768850 149769132 -16881164 - B4A SINE B4 -18 274 2 6 1727 186 43 0 0 chrX 149769197 149769220 -16881076 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 6 1727 670 249 24 42 chrX 149769225 149769393 -16880903 - RSINE1 SINE B4 0 165 1 6 1727 896 280 68 3 chrX 149769551 149770045 -16880251 - L1MA9 LINE L1 -1294 4849 4309 6 1727 250 293 12 12 chrX 149770104 149770187 -16880109 - RSINE1 SINE B4 0 165 83 6 1727 1228 277 10 39 chrX 149770240 149770623 -16879673 + Lx7 LINE L1 6930 7301 -395 6 1727 255 31 0 0 chrX 149770634 149770666 -16879630 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1727 21 36 0 0 chrX 149770803 149770831 -16879465 + AT_rich Low_complexity Low_complexity 1 28 0 6 1727 606 264 94 43 chrX 149770841 149771256 -16879040 - L1MA9 LINE L1 -2460 3683 3248 6 1727 402 283 152 23 chrX 149771366 149771583 -16878713 - L1M4 LINE L1 -3241 2905 2661 6 1727 406 252 80 10 chrX 149771608 149771708 -16878588 - B1F SINE Alu -6 143 37 6 1727 572 263 50 28 chrX 149771813 149771954 -16878342 - RSINE1 SINE B4 -20 145 2 6 1727 495 288 56 14 chrX 149771955 149772311 -16877985 - L1MA9 LINE L1 -3519 2624 2254 6 1727 481 39 65 0 chrX 149772375 149772452 -16877844 - B1_Mus2 SINE Alu 0 147 66 6 1727 456 87 0 0 chrX 149772509 149772578 -16877718 - B1_Mm SINE Alu 0 147 79 6 1727 892 140 7 20 chrX 149772580 149772726 -16877570 - B1_Mur3 SINE Alu -1 148 5 6 1727 959 71 0 16 chrX 149772780 149772908 -16877388 - B1_Mus2 SINE Alu -21 126 1 6 1727 524 208 74 34 chrX 149772908 149772919 -16877377 - ID_B1 SINE B4 0 160 70 6 1727 234 0 0 0 chrX 149774522 149774548 -16875748 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 1727 274 324 64 18 chrX 149775512 149775622 -16874674 - B3 SINE B2 -11 205 91 6 1727 3623 154 19 45 chrX 149775754 149776131 -16874165 + L1_Mur3 LINE L1 629 1008 -6720 6 1727 1107 83 7 0 chrX 149776131 149776276 -16874020 + B1_Mm SINE Alu 1 146 -1 6 1727 5629 152 51 41 chrX 149776276 149777781 -16872515 + L1_Mur3 LINE L1 1009 2517 -3363 6 1727 1370 166 127 9 chrX 149777778 149778103 -16872193 + Lx7 LINE L1 7071 7696 0 6 1727 535 214 134 27 chrX 149778103 149778265 -16872031 + MTD LTR MaLR 174 372 -47 6 1727 1940 199 44 109 chrX 149778285 149778609 -16871687 + L1_Rod LINE L1 4695 5015 -832 6 1727 420 20 0 0 chrX 149778609 149778658 -16871638 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1727 1940 199 44 109 chrX 149778658 149778914 -16871382 + L1_Rod LINE L1 5016 5224 -623 6 1727 1078 69 7 7 chrX 149778914 149779060 -16871236 + B1_Mm SINE Alu 2 147 0 6 1727 1940 199 44 109 chrX 149779060 149779176 -16871120 + L1_Rod LINE L1 5225 5347 -500 6 1727 732 148 62 90 chrX 149779196 149779374 -16870922 + ORR1C1 LTR MaLR 11 183 -195 6 1727 1247 226 78 5 chrX 149779377 149779789 -16870507 + Lx9 LINE L1 6504 6945 -699 6 1727 1622 206 59 14 chrX 149779827 149780182 -16870114 - ORR1D1 LTR MaLR -3 371 1 6 1727 1528 235 174 25 chrX 149780182 149780941 -16869355 - ORR1D1-int LTR MaLR 0 1509 433 6 1727 1195 173 84 26 chrX 149780994 149781297 -16868999 + ORR1D1 LTR MaLR 26 374 0 6 1727 2610 184 84 46 chrX 149781297 149781953 -16868343 + Lx9 LINE L1 6963 7643 -1 6 1727 27 73 0 0 chrX 149781955 149782010 -16868286 + AT_rich Low_complexity Low_complexity 1 55 0 6 1727 217 178 0 88 chrX 149782468 149782536 -16867760 + A-rich Low_complexity Low_complexity 1 62 0 6 1727 230 350 0 30 chrX 149782542 149782642 -16867654 + B4 SINE B4 3 99 -193 6 1727 39 0 0 0 chrX 149782766 149782805 -16867491 + AT_rich Low_complexity Low_complexity 1 39 0 6 1727 495 304 69 12 chrX 149783341 149783514 -16866782 + MER5A DNA MER1_type 4 186 -3 6 1727 23 78 0 0 chrX 149783653 149783704 -16866592 + AT_rich Low_complexity Low_complexity 1 51 0 6 1727 815 197 44 11 chrX 149783719 149783899 -16866397 - Lx6 LINE L1 -396 7064 6879 6 1727 186 103 0 0 chrX 149783902 149783931 -16866365 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1727 715 213 49 7 chrX 149783932 149784074 -16866222 - B3A SINE B2 -42 156 9 6 1727 21 36 0 0 chrX 149784162 149784190 -16866106 + AT_rich Low_complexity Low_complexity 1 28 0 6 1727 225 0 0 0 chrX 149784364 149784389 -16865907 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 6 1727 230 275 132 0 chrX 149784597 149784688 -16865608 - MurSatRep1 Unknown Unknown -1864 273 171 6 1727 365 266 158 0 chrX 149784704 149784843 -16865453 + MIR SINE MIR 85 245 -17 6 1727 1245 27 0 0 chrX 149785127 149785273 -16865023 - B1_Mm SINE Alu 0 147 2 6 1727 216 311 58 82 chrX 149785329 149785480 -16864816 - L2c LINE L2 -10 3416 3248 6 1727 262 333 58 10 chrX 149786249 149786352 -16863944 - PB1D10 SINE Alu -9 108 1 6 1727 627 307 88 33 chrX 149786385 149786724 -16863572 - MLT1A1 LTR MaLR -8 400 17 6 1727 406 321 62 41 chrX 149787386 149787532 -16862764 - RSINE1 SINE B4 -1 164 16 6 1727 789 67 0 0 chrX 149787751 149787855 -16862441 + (TA)n Simple_repeat Simple_repeat 2 105 0 6 1727 298 378 9 0 chrX 149787859 149787970 -16862326 - MIRb SINE MIR -115 153 42 6 1727 424 217 109 0 chrX 149788466 149788604 -16861692 - MER113 DNA MER1_type -64 457 305 6 1727 963 0 0 0 chrX 149790687 149790794 -16859502 + (TTCTC)n Simple_repeat Simple_repeat 3 109 0 6 1727 1017 67 0 36 chrX 149790797 149790937 -16859359 - B1_Mus1 SINE Alu -12 136 2 6 1727 205 333 182 0 chrX 149792208 149792334 -16857962 + MIR SINE MIR 99 247 -15 6 1727 389 260 125 37 chrX 149792889 149793025 -16857271 + B1F SINE Alu 2 149 0 6 1727 325 242 0 0 chrX 149793046 149793108 -16857188 + ID4_ SINE ID 4 65 -18 6 1727 218 342 17 26 chrX 149793137 149793254 -16857042 + MIRb SINE MIR 153 268 0 6 1727 297 0 0 0 chrX 149793297 149793330 -16856966 + (TC)n Simple_repeat Simple_repeat 1 33 0 6 1727 261 0 0 0 chrX 149796746 149796775 -16853521 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 1727 21 0 0 0 chrX 149796924 149796945 -16853351 + AT_rich Low_complexity Low_complexity 1 21 0 6 1727 616 207 18 9 chrX 149796989 149797101 -16853195 - B3A SINE B2 -84 114 2 6 1727 229 200 18 35 chrX 149797332 149797389 -16852907 - ID_B1 SINE B4 -55 169 114 6 1727 255 231 15 44 chrX 149797342 149797410 -16852886 - B1F SINE Alu -69 80 15 6 1727 600 193 16 16 chrX 149797950 149798071 -16852225 - B1_Mur3 SINE Alu -20 129 9 6 1727 1677 21 0 0 chrX 149798399 149798591 -16851705 - B2_Mm1a SINE B2 0 193 2 6 1727 278 304 25 12 chrX 149798753 149798833 -16851463 - ID4_ SINE ID 0 83 3 6 1727 454 194 17 77 chrX 149798905 149799022 -16851274 + PB1D9 SINE Alu 11 120 0 7 1727 222 320 77 39 chrX 149799141 149799323 -16850973 + MIR SINE MIR 60 248 -14 7 1727 282 70 0 0 chrX 149799511 149799541 -16850755 + (TTTTA)n Simple_repeat Simple_repeat 5 34 0 7 1727 1577 32 5 0 chrX 149799541 149799728 -16850568 - B2_Mm1t SINE B2 -4 189 2 7 1727 282 70 0 0 chrX 149799728 149799740 -16850556 + (TTTTA)n Simple_repeat Simple_repeat 3 14 0 7 1727 30 45 0 0 chrX 149799991 149800035 -16850261 + AT_rich Low_complexity Low_complexity 1 44 0 7 1727 24 0 0 0 chrX 149800085 149800109 -16850187 + AT_rich Low_complexity Low_complexity 1 24 0 7 1727 252 340 44 30 chrX 149800129 149800332 -16849964 - L1MC4a LINE L1 -1945 5937 5732 7 1727 509 368 31 46 chrX 149800374 149800724 -16849572 - MLT1A LTR MaLR -5 369 25 7 1727 243 316 120 0 chrX 149800711 149800844 -16849452 + MER102a DNA MER1_type 8 156 -174 7 1727 1072 23 0 0 chrX 149800882 149801011 -16849285 + B1_Mm SINE Alu 12 140 -7 7 1727 542 266 69 60 chrX 149801299 149801531 -16848765 - Lx8 LINE L1 -7 7466 7233 7 1727 223 297 57 86 chrX 149802115 149802255 -16848041 - MIR SINE MIR -42 226 84 7 1727 440 236 217 0 chrX 149802774 149802880 -16847416 - B1_Mur1 SINE Alu -19 130 2 7 1727 318 264 26 78 chrX 149803264 149803379 -16846917 + PB1D10 SINE Alu 1 109 -8 7 1727 756 61 0 0 chrX 149803670 149803768 -16846528 + (TATATG)n Simple_repeat Simple_repeat 2 99 0 7 1727 192 306 0 31 chrX 149804038 149804102 -16846194 + L2a LINE L2 3351 3412 -14 7 1727 315 208 53 0 chrX 149804136 149804228 -16846068 + B1F SINE Alu 1 106 -43 7 1727 298 42 42 0 chrX 149805868 149805916 -16844380 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 1727 395 260 48 0 chrX 149805959 149806063 -16844233 + PB1D10 SINE Alu 9 117 0 7 1727 501 168 133 30 chrX 149806128 149806263 -16844033 - MTD LTR MaLR 0 419 271 7 1727 446 196 61 10 chrX 149806321 149806419 -16843877 - MTD LTR MaLR -271 148 46 7 1727 315 286 150 73 chrX 149806370 149806548 -16843748 - MLT2C2 LTR ERVL -183 281 88 7 1727 518 186 194 0 chrX 149806548 149806672 -16843624 + B1_Mur2 SINE Alu 1 148 -1 7 1727 315 286 150 73 chrX 149806672 149806753 -16843543 - MLT2C2 LTR ERVL -377 87 3 7 1727 571 191 29 87 chrX 149806813 149806951 -16843345 - B1F SINE Alu -1 148 19 7 1727 348 295 36 108 chrX 149806951 149806980 -16843316 - ID_B1 SINE B4 -3 221 67 7 1727 619 282 0 0 chrX 149807207 149807356 -16842940 - B1F2 SINE Alu 0 149 1 7 1727 396 0 0 0 chrX 149807802 149807846 -16842450 + (TC)n Simple_repeat Simple_repeat 1 44 0 7 1727 225 0 0 0 chrX 149807846 149807870 -16842426 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 1727 198 103 0 0 chrX 149808024 149808053 -16842243 + (CATA)n Simple_repeat Simple_repeat 2 30 0 7 1727 380 221 57 74 chrX 149808432 149808601 -16841695 - B3A SINE B2 0 216 42 7 1727 867 119 15 22 chrX 149808857 149808994 -16841302 + B1_Mur4 SINE Alu 10 145 -5 7 1727 283 264 91 91 chrX 149808978 149809099 -16841197 - MLT1D LTR MaLR -378 127 7 7 1727 349 265 39 48 chrX 149809326 149809429 -16840867 - PB1D10 SINE Alu -1 116 15 7 1727 243 0 0 0 chrX 149810200 149810227 -16840069 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1727 210 37 0 0 chrX 149810671 149810698 -16839598 + (TTG)n Simple_repeat Simple_repeat 2 28 0 7 1727 7699 33 1 1 chrX 149810784 149812134 -16838162 - L1Md_F2 LINE L1 -13 6569 5221 7 1727 1086 264 25 11 chrX 149812269 149812552 -16837744 - Lx5 LINE L1 -15 7035 6749 7 1727 576 242 33 8 chrX 149813277 149813398 -16836898 + B3A SINE B2 2 125 -73 7 1727 452 176 0 0 chrX 149813582 149813656 -16836640 + B3A SINE B2 2 75 -123 7 1727 909 206 12 0 chrX 149814027 149814192 -16836104 - B3A SINE B2 -31 167 1 7 1728 435 130 0 0 chrX 149815372 149815449 -16834847 + (TA)n Simple_repeat Simple_repeat 2 78 0 7 1728 637 299 38 13 chrX 149815454 149815613 -16834683 - B3A SINE B2 -34 164 2 7 1728 688 258 126 10 chrX 149815705 149816006 -16834290 - L1MA6 LINE L1 -286 6014 5679 7 1728 354 91 0 0 chrX 149816037 149816092 -16834204 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1728 335 225 9 176 chrX 149816092 149816200 -16834096 - PB1D10 SINE Alu -11 106 17 7 1728 219 314 45 23 chrX 149816309 149816397 -16833899 + L2c LINE L2 3066 3155 -232 7 1728 330 26 0 0 chrX 149816694 149816733 -16833563 + (TTCC)n Simple_repeat Simple_repeat 3 41 0 7 1728 360 282 47 28 chrX 149817808 149817914 -16832382 + PB1D10 SINE Alu 7 114 -3 7 1728 183 306 25 89 chrX 149818104 149818183 -16832113 + L2 LINE L2 458 531 -2888 7 1728 262 351 13 0 chrX 149818491 149818568 -16831728 - ID4_ SINE ID -3 80 3 7 1728 243 0 0 0 chrX 149818580 149818607 -16831689 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1728 342 0 0 0 chrX 149819262 149819300 -16830996 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1728 332 323 0 10 chrX 149819621 149819718 -16830578 + MamRep137 DNA TcMar? 206 301 -143 7 1728 242 164 0 52 chrX 149820061 149820119 -16830177 + C-rich Low_complexity Low_complexity 5 59 0 7 1728 470 259 49 57 chrX 149820296 149820419 -16829877 - ID_B1 SINE B4 -102 122 1 7 1728 410 167 0 0 chrX 149820436 149820502 -16829794 - ID_B1 SINE B4 -37 187 122 7 1728 256 279 62 18 chrX 149820507 149820620 -16829676 - L1M2 LINE L1 -692 5605 5488 7 1728 255 125 0 0 chrX 149820630 149820670 -16829626 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 7 1728 684 309 42 37 chrX 149820670 149820910 -16829386 - L1M2 LINE L1 -820 5480 5241 7 1728 626 52 0 10 chrX 149820910 149821007 -16829289 - L1_Mus1 LINE L1 0 6567 6472 7 1728 684 302 30 52 chrX 149821007 149821339 -16828957 - L1M2 LINE L1 -903 5240 4906 7 1728 730 249 60 63 chrX 149821675 149821848 -16828448 - L1M2 LINE L1 -1263 4880 4713 7 1728 2865 126 9 11 chrX 149821848 149822290 -16828006 - BGLII_B LTR ERVK 0 441 1 7 1728 730 249 60 63 chrX 149822290 149822322 -16827974 - L1M2 LINE L1 -1431 4712 4691 7 1728 1501 38 16 11 chrX 149822322 149822509 -16827787 - B2_Mm2 SINE B2 -7 188 1 7 1728 730 257 55 84 chrX 149822509 149822799 -16827497 - L1M2 LINE L1 -1453 4690 4411 7 1728 666 208 96 14 chrX 149822864 149823010 -16827286 - RSINE1 SINE B4 0 165 8 7 1728 804 307 66 47 chrX 149823033 149823546 -16826750 - L1M2 LINE L1 -1985 4158 3636 7 1728 2733 42 0 3 chrX 149823574 149823907 -16826389 + L1_Mus1 LINE L1 6236 6567 0 7 1728 593 254 26 0 chrX 149824257 149824371 -16825925 - B1_Mur1 SINE Alu -30 119 3 7 1728 207 0 0 0 chrX 149824729 149824752 -16825544 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 7 1728 4396 111 26 9 chrX 149824754 149825437 -16824859 - Lx4B LINE L1 -4 7054 6360 7 1728 346 197 0 0 chrX 149825437 149825498 -16824798 + B1_Mus2 SINE Alu 82 142 -5 7 1728 1198 193 19 0 chrX 149825520 149825732 -16824564 - B3 SINE B2 0 216 1 7 1728 324 0 0 0 chrX 149825853 149825889 -16824407 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 1728 952 300 66 54 chrX 149826203 149826552 -16823744 + ORR1E LTR MaLR 1 353 -6 7 1728 432 226 43 0 chrX 149826623 149826716 -16823580 - B1F2 SINE Alu -7 142 46 7 1728 260 311 109 58 chrX 149826738 149826912 -16823384 - MIRb SINE MIR -79 189 7 7 1728 226 246 0 40 chrX 149826984 149827060 -16823236 + L1MA8 LINE L1 6153 6225 -66 7 1728 345 100 0 0 chrX 149827819 149827869 -16822427 + (TA)n Simple_repeat Simple_repeat 1 50 0 7 1728 180 239 22 0 chrX 149828972 149829018 -16821278 - MIR3 SINE MIR -49 159 113 7 1728 2079 264 108 57 chrX 149830313 149830707 -16819589 - L1MC3 LINE L1 0 7785 7357 7 1728 721 101 151 56 chrX 149830707 149830833 -16819463 + B1_Mur3 SINE Alu 1 138 -11 7 1728 351 0 0 0 chrX 149830835 149830874 -16819422 + (CTAAA)n Simple_repeat Simple_repeat 3 41 0 7 1728 2079 264 108 57 chrX 149830874 149831626 -16818670 - L1MC3 LINE L1 -429 7356 6577 7 1728 306 301 73 83 chrX 149831646 149831838 -16818458 - L1MC3 LINE L1 -1270 6515 6326 7 1728 400 230 14 19 chrX 149832138 149832265 -16818031 + MIRb SINE MIR 67 189 -79 7 1728 26 0 0 0 chrX 149833435 149833461 -16816835 + AT_rich Low_complexity Low_complexity 1 26 0 7 1728 236 282 0 78 chrX 149833543 149833620 -16816676 + MT2B2 LTR ERVL 165 235 -349 7 1728 688 197 7 21 chrX 149833552 149833692 -16816604 + B1_Mus1 SINE Alu 11 148 0 7 1728 207 0 0 0 chrX 149834823 149834846 -16815450 + (T)n Simple_repeat Simple_repeat 1 23 0 7 1728 1908 172 188 4 chrX 149835153 149835643 -16814653 - Lx9 LINE L1 0 7644 7065 7 1728 692 119 0 0 chrX 149835643 149835744 -16814552 + B2_Mm2 SINE B2 1 101 -94 7 1728 7766 78 29 11 chrX 149835765 149836264 -16814032 - MusHAL1 LINE L1 -1 2711 2223 7 1728 3329 99 2 35 chrX 149836264 149836755 -16813541 + MT2C_Mm LTR ERVL 1 475 0 7 1728 7766 78 29 11 chrX 149836755 149837440 -16812856 - MusHAL1 LINE L1 -490 2222 1506 7 1728 406 63 0 31 chrX 149838683 149838748 -16811548 - MusHAL1 LINE L1 -1189 1523 1461 7 1728 1315 197 184 18 chrX 149838745 149839137 -16811159 - Lx9 LINE L1 -616 7028 6572 7 1728 684 250 40 26 chrX 149839442 149839594 -16810702 - B3 SINE B2 -62 154 1 7 1728 959 158 0 7 chrX 149839613 149839760 -16810536 + B1_Mur4 SINE Alu 3 148 -2 7 1728 313 236 100 0 chrX 149839765 149839875 -16810421 + L1MA7 LINE L1 6087 6207 -84 7 1728 249 229 16 0 chrX 149840022 149840083 -16810213 + CT-rich Low_complexity Low_complexity 2 63 0 7 1728 1250 85 0 0 chrX 149840192 149840357 -16809939 + B2_Mm2 SINE B2 2 166 -29 7 1728 996 84 47 72 chrX 149840357 149840550 -16809746 - L1_Mus3 LINE L1 -7 6631 6444 7 1728 387 0 0 0 chrX 149840552 149840595 -16809701 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 7 1728 271 210 32 0 chrX 149840671 149840733 -16809563 - L1MA4 LINE L1 -32 6268 6205 7 1728 200 235 15 0 chrX 149840758 149840826 -16809470 + (CA)n Simple_repeat Simple_repeat 2 70 0 7 1728 712 267 111 72 chrX 149840864 149841437 -16808859 - L1MA4 LINE L1 -110 6190 5590 7 1728 224 128 0 60 chrX 149841437 149841487 -16808809 - B1_Mur2 SINE Alu -8 141 95 7 1728 712 267 111 72 chrX 149841487 149841828 -16808468 - L1MA4 LINE L1 -110 5589 5231 7 1728 238 254 15 0 chrX 149841986 149842053 -16808243 - Lx7 LINE L1 -13 7683 7616 7 1728 580 245 7 13 chrX 149842125 149842278 -16808018 + Lx7 LINE L1 6895 7046 -650 7 1728 337 217 114 15 chrX 149842343 149842504 -16807792 - L1M5 LINE L1 -2892 3254 3049 7 1728 392 284 55 42 chrX 149842608 149842825 -16807471 - L1_Mur3 LINE L1 -2123 3757 3538 8 1728 202 146 24 0 chrX 149842839 149842880 -16807416 + T-rich Low_complexity Low_complexity 1 42 0 8 1728 954 133 7 14 chrX 149842884 149843029 -16807267 - B1_Mm SINE Alu -3 144 1 8 1728 283 182 18 0 chrX 149843037 149843092 -16807204 - L1_Mur1 LINE L1 -2346 3540 3485 8 1728 279 0 0 0 chrX 149843259 149843290 -16807006 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 1728 322 352 28 9 chrX 149843316 149843531 -16806765 - L1M2 LINE L1 -2676 3467 3249 8 1728 915 133 21 7 chrX 149843534 149843678 -16806618 - B1_Mus2 SINE Alu 0 147 2 8 1728 381 264 180 24 chrX 149843688 149844061 -16806235 - L1M2 LINE L1 -2873 3270 2840 8 1728 22 35 0 0 chrX 149844115 149844144 -16806152 + AT_rich Low_complexity Low_complexity 1 29 0 8 1728 1153 68 0 13 chrX 149844594 149844743 -16805553 - B1_Mus1 SINE Alu 0 148 2 8 1728 769 287 61 34 chrX 149844908 149845236 -16805060 + RMER5 LTR ERV1 40 376 -158 8 1728 491 293 78 0 chrX 149845264 149845431 -16804865 + B3A SINE B2 1 180 -18 8 1728 1360 146 89 23 chrX 149845657 149845916 -16804380 - MTD LTR MaLR 0 419 144 8 1728 1088 132 72 81 chrX 149845946 149846168 -16804128 - URR1A DNA MER1_type -2 224 5 8 1728 610 271 98 87 chrX 149846274 149846405 -16803891 + L1M2 LINE L1 2661 2781 -3066 8 1728 381 43 0 0 chrX 149846405 149846452 -16803844 + (GAAA)n Simple_repeat Simple_repeat 4 50 0 8 1728 656 271 105 82 chrX 149846452 149847218 -16803078 + L1M2 LINE L1 2773 3564 -2313 8 1728 311 273 3 0 chrX 149847292 149847395 -16802901 + L1M2 LINE L1 5726 5830 -470 8 1728 256 212 47 47 chrX 149847649 149847746 -16802550 + L1M2 LINE L1 3666 3765 -2378 8 1728 1069 264 103 21 chrX 149847797 149848281 -16802015 + L1_Mur3 LINE L1 3889 4412 -1468 8 1728 41 36 0 0 chrX 149848727 149848782 -16801514 + AT_rich Low_complexity Low_complexity 1 55 0 8 1728 845 139 6 0 chrX 149848852 149849025 -16801271 + (TC)n Simple_repeat Simple_repeat 2 175 0 8 1728 959 295 184 27 chrX 149850381 149850876 -16799420 - Lx8 LINE L1 -54 7419 6860 8 1728 302 0 26 0 chrX 149850876 149850914 -16799382 + (CAAA)n Simple_repeat Simple_repeat 4 42 0 8 1728 959 295 184 27 chrX 149850914 149851010 -16799286 - Lx8 LINE L1 -614 6859 6735 8 1728 3662 171 12 8 chrX 149852215 149852859 -16797437 + Lx5 LINE L1 6295 6941 -109 8 1728 383 273 57 8 chrX 149852905 149853027 -16797269 - MER67C LTR ERV1 -171 540 413 8 1728 517 298 101 18 chrX 149853127 149853346 -16796950 - MER67C LTR ERV1 -439 272 36 8 1728 273 183 135 40 chrX 149854914 149854925 -16795371 - PB1 SINE Alu -3 124 116 8 1728 2576 108 69 3 chrX 149854925 149855315 -16794981 - Lx4A LINE L1 -2 7056 6641 8 1728 366 240 13 0 chrX 149855315 149855390 -16794906 - PB1D10 SINE Alu -13 104 29 8 1728 4286 66 6 0 chrX 149855642 149856185 -16794111 - L1_Mus3 LINE L1 -18 6620 6075 8 1728 2727 30 233 0 chrX 149856185 149856558 -16793738 + L1_Mus3 LINE L1 5599 6058 -580 8 1728 315 0 0 0 chrX 149856950 149856985 -16793311 + (TA)n Simple_repeat Simple_repeat 2 36 0 8 1728 630 243 0 75 chrX 149857047 149857113 -16793183 - RSINE1 SINE B4 -21 144 85 8 1728 1288 165 27 9 chrX 149857113 149857333 -16792963 + URR1B DNA MER1_type 2 225 0 8 1728 630 243 0 75 chrX 149857333 149857413 -16792883 - RSINE1 SINE B4 -81 84 9 8 1728 220 262 23 23 chrX 149857952 149858038 -16792258 + B2_Mm1t SINE B2 1 86 -107 8 1728 549 44 0 0 chrX 149858471 149858539 -16791757 + (TG)n Simple_repeat Simple_repeat 2 69 0 8 1728 2246 154 38 8 chrX 149858765 149859132 -16791164 + ORR1C1 LTR MaLR 1 378 0 8 1728 349 295 158 8 chrX 149859436 149859569 -16790727 + B3A SINE B2 28 180 -18 8 1728 210 71 0 0 chrX 149859573 149859601 -16790695 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 1728 747 152 45 8 chrX 149859677 149859810 -16790486 + B1_Mus1 SINE Alu 2 139 -9 8 1728 231 36 0 0 chrX 149859811 149859839 -16790457 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 8 1728 23 68 0 0 chrX 149860044 149860088 -16790208 + AT_rich Low_complexity Low_complexity 1 44 0 8 1728 571 78 22 0 chrX 149860113 149860203 -16790093 + (TTCC)n Simple_repeat Simple_repeat 2 93 0 8 1728 531 210 114 30 chrX 149860203 149860404 -16789892 - L1_Rod LINE L1 -2245 3602 3385 8 1728 249 79 0 0 chrX 149860404 149860442 -16789854 - L1_Mm LINE L1 -2909 2974 2937 8 1728 261 0 0 0 chrX 149861093 149861122 -16789174 + (TTG)n Simple_repeat Simple_repeat 2 30 0 8 1728 677 291 112 22 chrX 149861354 149861621 -16788675 + B4A SINE B4 2 292 0 8 1728 1324 189 102 30 chrX 149863256 149863561 -16786735 + ORR1D1 LTR MaLR 18 344 -30 8 1728 729 249 60 72 chrX 149864131 149864807 -16785489 + L1_Mur3 LINE L1 885 1579 -4301 8 1728 734 134 8 0 chrX 149864830 149864957 -16785339 + (GA)n Simple_repeat Simple_repeat 2 129 0 8 1728 1728 192 36 10 chrX 149864957 149865373 -16784923 + L1_Mur3 LINE L1 1583 2009 -3871 8 1728 2710 266 11 15 chrX 149865368 149866124 -16784172 + Lx7 LINE L1 6560 7312 -384 8 1728 268 236 0 0 chrX 149866147 149866219 -16784077 + T-rich Low_complexity Low_complexity 1 72 0 8 1728 21 57 0 0 chrX 149866652 149866687 -16783609 + AT_rich Low_complexity Low_complexity 1 35 0 8 1728 23 54 0 0 chrX 149866952 149866989 -16783307 + AT_rich Low_complexity Low_complexity 1 37 0 8 1728 180 111 0 0 chrX 149868074 149868101 -16782195 + (CAGAGA)n Simple_repeat Simple_repeat 5 31 0 8 1728 291 253 113 128 chrX 149868992 149869038 -16781258 - B2_Mm2 SINE B2 -2 193 155 8 1728 318 50 0 0 chrX 149869038 149869078 -16781218 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 1728 478 243 228 13 chrX 149869078 149869226 -16781070 - B3A SINE B2 -24 174 2 8 1728 285 273 73 0 chrX 149869491 149869601 -16780695 - L1MA6 LINE L1 -365 5935 5818 8 1728 788 279 11 6 chrX 149869601 149869781 -16780515 + MT2A LTR ERVL 284 464 -69 8 1728 254 207 35 0 chrX 149869853 149869911 -16780385 + Ricksha_c DNA MuDR 847 906 -1142 8 1728 414 326 114 47 chrX 149869911 149870210 -16780086 - L1M2 LINE L1 -3405 2738 2420 8 1728 2041 293 110 55 chrX 149870262 149871457 -16778839 - Lx9 LINE L1 -27 7617 6336 8 1728 201 74 0 0 chrX 149871457 149871484 -16778812 + (CCTG)n Simple_repeat Simple_repeat 1 27 0 8 1728 2041 293 110 55 chrX 149871484 149871671 -16778625 - Lx9 LINE L1 -1309 6335 6159 8 1728 1380 234 60 32 chrX 149871802 149872081 -16778215 - L1_Rod LINE L1 -4165 1715 1451 8 1728 489 76 0 0 chrX 149872081 149872147 -16778149 + (TG)n Simple_repeat Simple_repeat 1 66 0 8 1728 1528 189 42 9 chrX 149872147 149872573 -16777723 - L1_Rod LINE L1 -4397 1450 1001 8 1728 1083 282 24 6 chrX 149872605 149872933 -16777363 - Lx8 LINE L1 -1022 6451 6118 8 1728 1027 281 35 102 chrX 149872928 149873602 -16776694 - Lx8 LINE L1 -434 5413 4806 8 1728 324 0 0 0 chrX 149873605 149873641 -16776655 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 1728 2244 205 104 28 chrX 149873661 149873824 -16776472 - Lx9 LINE L1 -7 7637 7433 8 1728 252 0 0 0 chrX 149873824 149873852 -16776444 + (TG)n Simple_repeat Simple_repeat 2 29 0 8 1728 2244 205 104 28 chrX 149873852 149874330 -16775966 - Lx9 LINE L1 -212 7432 6947 8 1728 409 235 67 0 chrX 149874335 149874454 -16775842 - Lx9 LINE L1 -979 6665 6539 8 1728 489 254 73 0 chrX 149874565 149874675 -16775621 - B3 SINE B2 -65 151 34 8 1728 5304 54 3 3 chrX 149874900 149875569 -16774727 + L1Md_F2 LINE L1 5914 6582 0 8 1728 2021 297 70 40 chrX 149875768 149877485 -16772811 - Lx8 LINE L1 -2816 3031 1327 8 1728 2210 77 3 0 chrX 149877485 149877771 -16772525 - L1_Mus2 LINE L1 -1 6565 6279 8 1728 1557 297 42 6 chrX 149877771 149877908 -16772388 - Lx8 LINE L1 -4521 1326 1194 8 1728 180 0 0 0 chrX 149877953 149877973 -16772323 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 8 1728 387 0 0 0 chrX 149879669 149879712 -16770584 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 1728 380 82 16 0 chrX 149879712 149879772 -16770524 + (TA)n Simple_repeat Simple_repeat 2 63 0 8 1728 3602 139 33 19 chrX 149879772 149880402 -16769894 - Lx2 LINE L1 -30 6967 6329 8 1728 347 250 27 0 chrX 149880931 149881050 -16769246 + L1M2 LINE L1 5654 5777 -520 8 1728 7425 67 6 1 chrX 149881223 149882531 -16767765 - L1_Mus2 LINE L1 0 6654 5262 8 1728 276 155 0 0 chrX 149882554 149882625 -16767671 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 8 1728 2092 228 97 24 chrX 149884003 149884149 -16766147 - Lx9 LINE L1 -7 7637 7490 8 1728 426 125 0 0 chrX 149884149 149884229 -16766067 + (CA)n Simple_repeat Simple_repeat 1 80 0 8 1728 2092 228 97 24 chrX 149884229 149884742 -16765554 - Lx9 LINE L1 -155 7489 6931 8 1728 390 232 43 7 chrX 149884745 149884884 -16765412 + L1_Mur3 LINE L1 1501 1644 -4236 8 1728 315 146 0 0 chrX 149884896 149884951 -16765345 + (TATG)n Simple_repeat Simple_repeat 4 58 0 8 1728 861 259 57 4 chrX 149885025 149885254 -16765042 - Lx9 LINE L1 -1075 6569 6329 8 1728 435 83 0 0 chrX 149885266 149885326 -16764970 + (TA)n Simple_repeat Simple_repeat 1 60 0 8 1728 22 0 0 0 chrX 149885327 149885349 -16764947 + AT_rich Low_complexity Low_complexity 1 22 0 8 1728 521 195 0 17 chrX 149885434 149885549 -16764747 - Lx9 LINE L1 -163 7481 7369 8 1728 991 264 99 70 chrX 149885550 149885688 -16764608 - Lx8 LINE L1 -121 7352 7224 8 1728 1131 83 0 0 chrX 149885688 149885826 -16764470 + B1_Mus1 SINE Alu 2 139 -9 8 1728 214 0 62 42 chrX 149885826 149885874 -16764422 + (CAAAC)n Simple_repeat Simple_repeat 2 50 0 8 1728 991 264 99 70 chrX 149885880 149886184 -16764112 - Lx8 LINE L1 -250 7223 6897 8 1728 315 0 0 0 chrX 149886202 149886237 -16764059 + (TC)n Simple_repeat Simple_repeat 2 36 0 8 1728 330 98 0 0 chrX 149886237 149886287 -16764009 + (TG)n Simple_repeat Simple_repeat 2 52 0 8 1728 970 238 191 111 chrX 149886505 149886992 -16763304 - MT2A LTR ERVL -7 526 1 8 1728 1788 180 29 109 chrX 149886992 149887479 -16762817 - MERVL_2A-int LTR ERVL 0 5761 5314 8 1728 3496 175 60 26 chrX 149887875 149888609 -16761687 - MERVL_2A-int LTR ERVL -458 5303 4545 8 1728 2320 76 16 3 chrX 149888612 149888927 -16761369 - ORR1A2 LTR MaLR -8 319 1 8 1728 924 173 18 11 chrX 149888927 149889135 -16761161 - MERVL_2A-int LTR ERVL -1211 4550 4222 8 1728 364 332 143 12 chrX 149889488 149889732 -16760564 + B4A SINE B4 3 278 -14 8 1728 1090 127 196 0 chrX 149890335 149890524 -16759772 - URR1A DNA MER1_type 0 226 1 8 1728 3822 91 11 11 chrX 149890797 149891351 -16758945 - L1Md_F2 LINE L1 -3 6579 6026 8 1728 3248 46 27 0 chrX 149891351 149891845 -16758451 + L1Md_F2 LINE L1 5507 6023 -559 8 1728 1197 74 0 0 chrX 149891877 149892025 -16758271 - B1_Mus1 SINE Alu 0 148 1 8 1728 3329 56 0 0 chrX 149892243 149892652 -16757644 - L1_Mus1 LINE L1 0 6567 6159 8 1728 250 321 114 8 chrX 149892828 149892960 -16757336 - L2a LINE L2 -22 3404 3259 8 1728 196 264 0 36 chrX 149893702 149893757 -16756539 + L2 LINE L2 1686 1738 -1681 8 1728 731 138 312 6 chrX 149894752 149894912 -16755384 - B3 SINE B2 -6 210 2 8 1728 32190 82 22 3 chrX 149894922 149901005 -16749291 - L1Md_F2 LINE L1 0 6582 380 8 1728 244 332 16 78 chrX 149901013 149901234 -16749062 - L1M2 LINE L1 -2903 3240 3042 8 1728 734 280 40 0 chrX 149901234 149901434 -16748862 - B3 SINE B2 -7 209 2 8 1728 244 332 16 78 chrX 149901434 149901637 -16748659 - L1M2 LINE L1 -3102 3041 2842 8 1728 978 54 8 30 chrX 149901686 149901820 -16748476 + B1_Mus1 SINE Alu 18 148 0 9 1728 2740 77 37 10 chrX 149902501 149902884 -16747412 - L1Md_F2 LINE L1 -12 6570 6178 9 1728 2887 78 91 2 chrX 149902884 149903322 -16746974 + L1Md_A LINE L1 5700 6176 -406 9 1728 1103 73 0 0 chrX 149903375 149903511 -16746785 + B1_Mus1 SINE Alu 2 137 -11 9 1728 308 23 45 0 chrX 149903511 149903555 -16746741 + (CAAAA)n Simple_repeat Simple_repeat 5 50 0 9 1728 189 0 0 0 chrX 149904187 149904208 -16746088 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 9 1728 753 92 0 0 chrX 149905570 149905690 -16744606 + (TG)n Simple_repeat Simple_repeat 2 121 0 9 1728 8059 61 6 5 chrX 149905821 149907614 -16742682 - L1Md_F2 LINE L1 0 6582 4788 9 1728 299 274 52 52 chrX 149907623 149907844 -16742452 - L1M2 LINE L1 -3492 2648 2422 9 1728 273 231 77 0 chrX 149908110 149908175 -16742121 - B1_Mur2 SINE Alu 0 149 80 9 1728 183 268 35 18 chrX 149908635 149908692 -16741604 - L3b LINE CR1 -229 253 196 9 1728 521 344 6 58 chrX 149908981 149909154 -16741142 + MTEa LTR MaLR 1 164 -215 9 1728 407 100 29 20 chrX 149909340 149909442 -16740854 + (TCTCTG)n Simple_repeat Simple_repeat 2 104 0 9 1728 462 79 0 0 chrX 149909449 149909512 -16740784 + (TG)n Simple_repeat Simple_repeat 2 64 0 9 1728 438 281 75 48 chrX 149910080 149910267 -16740029 + MIRb SINE MIR 59 250 -18 9 1728 292 314 221 0 chrX 149910625 149910797 -16739499 - MIR SINE MIR -57 211 2 9 1728 190 315 0 0 chrX 149910949 149911003 -16739293 - MIR SINE MIR -15 247 194 9 1728 869 203 137 4 chrX 149911114 149911391 -16738905 - Lx9 LINE L1 -2 7642 7329 9 1728 328 176 0 0 chrX 149911736 149911787 -16738509 + PB1D10 SINE Alu 24 74 -43 9 1728 414 0 0 0 chrX 149911801 149911847 -16738449 + (TC)n Simple_repeat Simple_repeat 1 46 0 9 1728 475 303 13 91 chrX 149912240 149912472 -16737824 + B3 SINE B2 2 215 -1 9 1728 710 221 0 7 chrX 149912481 149912622 -16737674 + B1_Mur1 SINE Alu 2 141 -8 9 1728 21 36 0 0 chrX 149912857 149912885 -16737411 + AT_rich Low_complexity Low_complexity 1 28 0 9 1728 342 0 0 0 chrX 149912885 149912923 -16737373 + (TC)n Simple_repeat Simple_repeat 2 39 0 9 1728 270 0 0 0 chrX 149912923 149912952 -16737344 + (TG)n Simple_repeat Simple_repeat 1 30 0 9 1728 242 284 0 111 chrX 149912964 149913063 -16737233 - B2_Mm2 SINE B2 -75 120 33 9 1728 221 342 57 32 chrX 149913813 149913937 -16736359 - ID_B1 SINE B4 -2 222 96 9 1728 279 0 0 0 chrX 149914183 149914214 -16736082 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 9 1728 636 225 167 6 chrX 149915298 149915472 -16734824 - B3 SINE B2 -14 202 1 9 1728 582 221 25 88 chrX 149915486 149915645 -16734651 + B3 SINE B2 68 216 0 9 1728 1733 258 114 35 chrX 149915679 149916373 -16733923 + Lx9 LINE L1 6708 7456 -188 9 1728 810 189 13 26 chrX 149916646 149916798 -16733498 - B1_Mur4 SINE Alu 0 150 1 9 1728 232 301 163 0 chrX 149917053 149917256 -16733040 + L1MA5 LINE L1 3353 3588 -2555 9 1728 1035 253 89 27 chrX 149917272 149917832 -16732464 + L1MA5 LINE L1 3665 4259 -1881 9 1728 1603 184 15 99 chrX 149917862 149918254 -16732042 - ORR1D1 LTR MaLR -5 369 11 9 1728 570 276 41 24 chrX 149918272 149918565 -16731731 + L1MA5 LINE L1 4290 4587 -1553 9 1728 321 224 0 0 chrX 149918567 149918625 -16731671 + ID_B1 SINE B4 89 146 -78 9 1728 1330 52 0 6 chrX 149918628 149918803 -16731493 + L1_Mus2 LINE L1 6392 6565 -1 9 1728 423 0 0 0 chrX 149918835 149918882 -16731414 + (GA)n Simple_repeat Simple_repeat 2 48 0 9 1728 471 298 15 5 chrX 149918979 149919185 -16731111 + L1MA5 LINE L1 4597 4804 -1339 9 1728 920 152 208 0 chrX 149919185 149919363 -16730933 + B3 SINE B2 2 216 0 9 1728 241 175 0 24 chrX 149919995 149920036 -16730260 + MLT1E1 LTR MaLR 4 43 -611 9 1728 690 93 0 0 chrX 149920056 149920153 -16730143 - L1_Mus1 LINE L1 -457 6110 6014 9 1728 1232 273 63 40 chrX 149920173 149920913 -16729383 + L1MA5 LINE L1 5541 6297 -3 9 1728 288 0 0 0 chrX 149921001 149921033 -16729263 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 9 1728 750 199 0 0 chrX 149921035 149921166 -16729130 - B1_Mur4 SINE Alu -13 137 7 9 1728 21 0 0 0 chrX 149921192 149921213 -16729083 + AT_rich Low_complexity Low_complexity 1 21 0 9 1728 482 303 96 15 chrX 149921225 149921423 -16728873 + MIR SINE MIR 36 249 -13 9 1728 1141 68 14 0 chrX 149921941 149922087 -16728209 - B1_Mus1 SINE Alu 0 148 1 9 1728 494 304 67 46 chrX 149922109 149922347 -16727949 + L1ME3A LINE L1 5842 6084 -89 9 1728 337 305 39 8 chrX 149922543 149922672 -16727624 + MIR SINE MIR 65 197 -65 9 1728 344 176 44 0 chrX 149923795 149923886 -16726410 - Lx7 LINE L1 0 7696 7602 9 1728 204 143 0 0 chrX 149923930 149923972 -16726324 + (T)n Simple_repeat Simple_repeat 1 42 0 9 1728 607 288 74 64 chrX 149924731 149924936 -16725360 - Charlie2b DNA MER1_type -6 2776 2584 9 1728 198 0 0 0 chrX 149924936 149924958 -16725338 + (TCTA)n Simple_repeat Simple_repeat 1 22 0 9 1728 607 259 191 51 chrX 149924958 149925528 -16724768 - Charlie2b DNA MER1_type -199 2583 1868 9 1728 477 306 145 36 chrX 149925577 149925825 -16724471 - Charlie2b DNA MER1_type -2457 325 51 9 1728 1460 87 36 124 chrX 149926239 149926514 -16723782 - Lx2 LINE L1 0 6997 6747 9 1728 505 333 71 14 chrX 149926928 149927177 -16723119 - MER102a DNA MER1_type -21 310 54 9 1728 342 209 44 0 chrX 149927512 149927603 -16722693 + (TCTCTG)n Simple_repeat Simple_repeat 2 96 0 9 1728 260 111 0 22 chrX 149927626 149927672 -16722624 + (TTTC)n Simple_repeat Simple_repeat 2 46 0 9 1728 1084 89 7 0 chrX 149927672 149927818 -16722478 - B1_Mus1 SINE Alu 0 148 2 9 1728 6875 30 0 6 chrX 149927849 149928669 -16721627 - L1Md_F3 LINE L1 -3 6581 5767 9 1728 593 63 0 0 chrX 149928669 149928748 -16721548 + L1_Mm LINE L1 5074 5152 -731 9 1728 622 27 0 0 chrX 149928746 149928821 -16721475 - L1Md_F2 LINE L1 -737 5845 5771 9 1728 5328 62 1 1 chrX 149928814 149929536 -16720760 + Lx7 LINE L1 5063 5783 -1913 9 1728 230 209 0 0 chrX 149930036 149930079 -16720217 - ID4 SINE ID -2 81 39 9 1728 205 300 0 0 chrX 149930464 149930514 -16719782 - MER5A DNA MER1_type -89 100 51 9 1728 283 272 12 36 chrX 149930962 149931046 -16719250 - ID4_ SINE ID 0 83 2 9 1728 300 277 109 56 chrX 149932014 149932316 -16717980 - L1M5 LINE L1 -536 5588 5271 9 1728 259 234 13 33 chrX 149932439 149932599 -16717697 + CT-rich Low_complexity Low_complexity 1 156 0 9 1728 299 23 0 44 chrX 149932663 149932708 -16717588 + (CGGGG)n Simple_repeat Simple_repeat 2 44 0 9 1728 35 63 0 0 chrX 149933018 149933081 -16717215 + GC_rich Low_complexity Low_complexity 1 63 0 9 1728 234 261 0 0 chrX 149933347 149933412 -16716884 + (CGA)n Simple_repeat Simple_repeat 3 67 0 9 1728 279 113 32 16 chrX 149935061 149935124 -16715172 + CT-rich Low_complexity Low_complexity 1 64 0 9 1728 212 184 0 58 chrX 149935140 149935192 -16715104 + CT-rich Low_complexity Low_complexity 2 50 0 9 1728 27 0 0 0 chrX 149936079 149936106 -16714190 + AT_rich Low_complexity Low_complexity 1 27 0 9 1728 24 53 0 0 chrX 149936867 149936905 -16713391 + AT_rich Low_complexity Low_complexity 1 38 0 9 1728 21 0 0 0 chrX 149937289 149937310 -16712986 + AT_rich Low_complexity Low_complexity 1 21 0 9 1728 344 173 99 0 chrX 149938226 149938307 -16711989 - Lx5 LINE L1 0 7050 6962 9 1728 189 0 0 0 chrX 149938310 149938331 -16711965 + (CCCA)n Simple_repeat Simple_repeat 1 21 0 9 1728 1577 115 4 44 chrX 149938335 149938608 -16711688 - Lx5 LINE L1 -152 6898 6637 9 1728 707 295 49 11 chrX 149939166 149939430 -16710866 + B4A SINE B4 1 274 -18 9 1728 462 140 0 0 chrX 149939483 149939583 -16710713 + (GA)n Simple_repeat Simple_repeat 2 101 0 9 1728 1097 136 36 59 chrX 149939828 149940047 -16710249 - Lx4A LINE L1 -1 7057 6844 9 1728 252 355 50 20 chrX 149940076 149940177 -16710119 - MIRb SINE MIR -145 123 13 9 1728 828 282 119 14 chrX 149940293 149940570 -16709726 - Helitron3Na_Mam RC Helitron -2 484 179 9 1728 1326 138 0 43 chrX 149940686 149940921 -16709375 + URR1A DNA MER1_type 1 225 -1 9 1728 488 364 139 8 chrX 149941077 149941553 -16708743 + L3 LINE CR1 3694 4231 -258 9 1728 1417 54 48 0 chrX 149941696 149941882 -16708414 + B2_Mm2 SINE B2 1 195 0 9 1728 1256 74 28 22 chrX 149942551 149942730 -16707566 - B2_Mm2 SINE B2 -14 181 2 9 1728 665 121 147 0 chrX 149942735 149942851 -16707445 - B1_Mus1 SINE Alu -1 147 15 9 1728 356 185 79 68 chrX 149943416 149943535 -16706761 - B1_Mur1 SINE Alu 0 149 1 9 1728 3085 262 112 34 chrX 149944060 149945443 -16704853 - L1MC3 LINE L1 -68 7717 6227 9 1728 697 292 95 25 chrX 149945498 149945740 -16704556 - B4A SINE B4 -25 267 9 9 1728 864 273 58 25 chrX 149945741 149946135 -16704161 - L1MC3 LINE L1 -1542 6243 5837 9 1729 368 338 112 81 chrX 149947428 149947821 -16702475 - MLT1A1 LTR MaLR -3 405 1 9 1729 2512 72 3 17 chrX 149947977 149948329 -16701967 + L1_Mus2 LINE L1 6204 6550 -16 9 1729 312 359 54 16 chrX 149948357 149948541 -16701755 - L1MC3 LINE L1 -1206 4940 4750 9 1729 1130 75 7 0 chrX 149948679 149948826 -16701470 + B1_Mus1 SINE Alu 1 148 0 9 1729 515 182 100 31 chrX 149948856 149948986 -16701310 - B2_Mm2 SINE B2 -8 187 49 9 1729 1235 48 0 0 chrX 149949028 149949175 -16701121 - B1_Mm SINE Alu 0 147 1 9 1729 737 206 0 40 chrX 149949178 149949330 -16700966 - B1_Mus2 SINE Alu -1 146 1 9 1729 236 350 0 0 chrX 149949601 149949661 -16700635 - ID4 SINE ID 0 83 24 9 1729 337 263 131 0 chrX 149949850 149949949 -16700347 - B1_Mm SINE Alu -32 115 4 9 1729 388 295 65 32 chrX 149950138 149950292 -16700004 - RSINE1 SINE B4 -4 161 3 9 1729 3070 257 94 57 chrX 149950418 149951283 -16699013 - Lx9 LINE L1 0 7644 6759 9 1729 1743 143 71 107 chrX 149951283 149951675 -16698621 - ORR1C1 LTR MaLR 0 378 1 9 1729 3070 257 94 57 chrX 149951675 149952079 -16698217 - Lx9 LINE L1 -886 6758 6330 9 1729 238 154 60 60 chrX 149952236 149952319 -16697977 - Lx9 LINE L1 -1647 5997 5915 9 1729 4877 231 56 134 chrX 149952377 149952812 -16697484 - L1_Rod LINE L1 -2324 3523 3092 9 1729 1149 113 0 6 chrX 149952812 149952981 -16697315 - B2_Mm2 SINE B2 -25 170 3 9 1729 4877 231 56 134 chrX 149952981 149953940 -16696356 - L1_Rod LINE L1 -2324 3091 2136 9 1729 463 289 47 0 chrX 149953940 149954068 -16696228 + B1_Mur1 SINE Alu 3 136 -13 1 1729 4877 233 64 106 chrX 149954068 149955296 -16695000 - L1_Rod LINE L1 -3712 2135 905 9 1729 551 296 73 63 chrX 149955992 149956403 -16693893 - L1MB5 LINE L1 -48 6126 5712 1 1729 2376 63 3 80 chrX 149956499 149956862 -16693434 + IAPLTR1a_Mm LTR ERVK 1 335 -2 1 1729 4704 62 3 37 chrX 149956866 149957556 -16692740 + IAPEz-int LTR ERVK 3 662 -5819 1 1729 424 38 0 0 chrX 149957556 149957609 -16692687 + IAPEz-int LTR ERVK 1359 1411 -5070 1 1729 1751 111 4 4 chrX 149957608 149957870 -16692426 + IAPEz-int LTR ERVK 2236 2497 -5183 1 1729 869 81 24 0 chrX 149957867 149957990 -16692306 + IAPEz-int LTR ERVK 4785 4910 -2770 1 1729 25415 11 2 0 chrX 149957990 149960941 -16689355 + IAPEz-int LTR ERVK 3525 6481 0 1 1729 2369 52 0 82 chrX 149960941 149961296 -16689000 + IAPLTR1a_Mm LTR ERVK 1 326 -11 1 1729 1182 73 18 24 chrX 149961304 149961473 -16688823 - B2_Mm2 SINE B2 -26 169 2 1 1729 351 273 122 11 chrX 149961475 149961732 -16688564 - L1MB5 LINE L1 -562 5612 5318 1 1729 477 141 0 0 chrX 149961984 149962083 -16688213 + (TC)n Simple_repeat Simple_repeat 2 100 0 1 1729 738 87 0 0 chrX 149962083 149962186 -16688110 + (TTCC)n Simple_repeat Simple_repeat 3 105 0 1 1729 945 186 109 0 chrX 149962284 149962477 -16687819 - B3 SINE B2 -2 214 1 1 1729 581 227 7 28 chrX 149962562 149962684 -16687612 - RSINE1 SINE B4 -38 127 6 1 1729 526 325 65 37 chrX 149962731 149962977 -16687319 - MLT1B LTR MaLR -13 377 125 1 1729 1128 276 39 39 chrX 149963210 149963700 -16686596 + L1MA8 LINE L1 5276 5765 -526 1 1729 380 228 238 14 chrX 149963700 149963847 -16686449 + MTE2a LTR MaLR 1 180 -199 1 1729 406 271 56 9 chrX 149963884 149963992 -16686304 + MTE2a LTR MaLR 267 379 0 1 1729 535 280 75 14 chrX 149964046 149964260 -16686036 + L1MA8 LINE L1 5842 6068 -223 1 1729 555 199 127 0 chrX 149964261 149964427 -16685869 + Lx9 LINE L1 7423 7609 -35 1 1729 22 88 0 0 chrX 149964433 149964490 -16685806 + AT_rich Low_complexity Low_complexity 1 57 0 1 1729 518 296 81 13 chrX 149964541 149964777 -16685519 - Lx8 LINE L1 -6 7467 7216 1 1729 4706 107 0 5 chrX 149964809 149965474 -16684822 - Lx LINE L1 -18 6636 5975 1 1729 4672 126 22 14 chrX 149965474 149965659 -16684637 - L1_Mm LINE L1 -963 4920 4737 1 1729 266 0 0 29 chrX 149965659 149965694 -16684602 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1729 4672 126 22 14 chrX 149965694 149966318 -16683978 - L1_Mm LINE L1 -1147 4736 4104 1 1729 273 29 0 0 chrX 149966385 149966419 -16683877 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 1 1729 882 130 13 52 chrX 149966419 149966564 -16683732 - B1_Mus1 SINE Alu -7 141 1 1 1729 407 295 55 94 chrX 149966564 149966627 -16683669 - B4 SINE B4 -213 79 28 1 1729 1049 206 65 0 chrX 149966628 149966842 -16683454 + MERVL_2A-int LTR ERVL 3343 3570 -2191 1 1729 261 149 0 0 chrX 149966831 149966878 -16683418 + MERVL_2A-int LTR ERVL 5439 5485 -276 1 1729 344 130 111 74 chrX 149967072 149967180 -16683116 + MERVL_2A-int LTR ERVL 5517 5628 -133 1 1729 253 221 70 42 chrX 149967180 149967251 -16683045 + ORR1A3-int LTR MaLR 567 639 -1324 1 1729 575 204 0 0 chrX 149967281 149967384 -16682912 + MT2A LTR ERVL 1 103 -430 1 1729 383 272 0 0 chrX 149967384 149967465 -16682831 - Lx8 LINE L1 -279 7194 7114 1 1729 425 268 31 8 chrX 149967494 149967622 -16682674 + Lx9 LINE L1 6774 6904 -740 1 1729 851 144 69 0 chrX 149967642 149967815 -16682481 - L1Md_F2 LINE L1 -1 6581 6397 1 1729 1345 253 38 14 chrX 149967817 149968186 -16682110 + RMER15-int LTR ERVL 4409 4786 -213 1 1729 700 52 0 40 chrX 149968296 149968396 -16681900 + B1_Mus2 SINE Alu 51 146 -1 1 1729 272 161 12 0 chrX 149968397 149968478 -16681818 + (CAAA)n Simple_repeat Simple_repeat 1 82 0 1 1729 2243 132 33 19 chrX 149968673 149969035 -16681261 - ORR1B2 LTR MaLR 0 367 1 1 1729 1054 109 0 7 chrX 149969347 149969495 -16680801 + B1_Mm SINE Alu 1 147 0 1 1729 1074 71 0 41 chrX 149969736 149969883 -16680413 + B1_Mus2 SINE Alu 1 141 -6 1 1729 31 0 0 0 chrX 149970469 149970500 -16679796 + AT_rich Low_complexity Low_complexity 1 31 0 1 1729 60 0 0 0 chrX 149970618 149970678 -16679618 + AT_rich Low_complexity Low_complexity 1 60 0 1 1729 840 286 10 5 chrX 149970678 149970875 -16679421 - B3A SINE B2 0 198 1 1 1729 183 241 33 33 chrX 149970877 149970937 -16679359 - MER5B DNA MER1_type -117 61 2 1 1729 192 275 0 38 chrX 149970998 149971051 -16679245 + MIRm SINE MIR 114 164 -112 1 1729 437 194 232 6 chrX 149971052 149971220 -16679076 + Lx9 LINE L1 6908 7113 -531 1 1729 7155 74 2 25 chrX 149971218 149971745 -16678551 + L1_Mus2 LINE L1 5275 5803 -80 1 1729 1148 73 82 22 chrX 149971745 149971927 -16678369 - B2_Mm2 SINE B2 -2 193 1 1 1729 7155 59 1 29 chrX 149971927 149972717 -16677579 + L1_Mus2 LINE L1 5804 6566 0 1 1729 1036 256 183 70 chrX 149972990 149973389 -16676907 + MT2A LTR ERVL 16 459 -74 1 1729 21 0 0 0 chrX 149973524 149973545 -16676751 + AT_rich Low_complexity Low_complexity 1 21 0 1 1729 25 0 0 0 chrX 149974503 149974528 -16675768 + AT_rich Low_complexity Low_complexity 1 25 0 1 1729 1112 195 24 5 chrX 149974627 149974833 -16675463 - B3 SINE B2 -6 210 1 1 1729 643 255 122 0 chrX 149974934 149975122 -16675174 - B3 SINE B2 -4 212 2 1 1729 1230 294 82 30 chrX 149975429 149975993 -16674303 - Lx8 LINE L1 -495 6978 6386 1 1729 1224 283 75 53 chrX 149976011 149976694 -16673602 + Lx7 LINE L1 5662 6359 -1337 1 1729 324 228 117 39 chrX 149976711 149976764 -16673532 - L1M2 LINE L1 -1225 4918 4866 1 1729 1378 251 68 10 chrX 149976764 149977158 -16673138 + MTD LTR MaLR 1 417 -2 1 1729 324 228 117 39 chrX 149977158 149977232 -16673064 - L1M2 LINE L1 -1278 4865 4781 1 1729 216 62 0 0 chrX 149977359 149977379 -16672917 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1729 429 20 0 0 chrX 149977379 149977429 -16672867 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 1 1729 216 62 0 0 chrX 149977429 149977440 -16672856 + (TAAAA)n Simple_repeat Simple_repeat 2 12 0 1 1729 4919 73 11 6 chrX 149977616 149978278 -16672018 - L1Md_F2 LINE L1 0 6582 5918 1 1729 534 198 10 10 chrX 149978278 149978380 -16671916 + MT2B LTR ERVL 439 540 -61 1 1729 306 0 0 0 chrX 149978383 149978417 -16671879 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1729 438 101 0 0 chrX 149978417 149978486 -16671810 + (GA)n Simple_repeat Simple_repeat 2 70 0 1 1729 216 0 0 0 chrX 149978991 149979015 -16671281 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1729 189 367 12 25 chrX 149980216 149980297 -16669999 - L2a LINE L2 0 3426 3347 1 1729 2793 50 9 0 chrX 149980616 149980959 -16669337 + ORR1A0 LTR MaLR 1 346 0 1 1729 260 185 73 18 chrX 149980959 149981069 -16669227 + Lx4B LINE L1 6926 7041 -17 1 1729 231 36 0 0 chrX 149981071 149981099 -16669197 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1 1729 257 277 0 56 chrX 149981100 149981181 -16669115 + B3A SINE B2 25 99 -99 1 1729 240 278 0 0 chrX 149981188 149981242 -16669054 - B3A SINE B2 -43 155 102 1 1729 197 213 33 0 chrX 149981282 149981343 -16668953 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 1 1729 261 255 43 0 chrX 149981484 149981578 -16668718 + L1MB8 LINE L1 6081 6178 0 1 1729 270 233 46 14 chrX 149981915 149982011 -16668285 + L1MA5 LINE L1 5802 5934 -366 1 1729 344 247 139 40 chrX 149982016 149982218 -16668078 + Charlie4a DNA MER1_type 168 389 -119 1 1729 22 56 0 0 chrX 149982398 149982434 -16667862 + AT_rich Low_complexity Low_complexity 1 36 0 1 1729 949 273 36 166 chrX 149982541 149982798 -16667498 - ORR1D2 LTR MaLR -7 363 151 1 1729 435 19 0 0 chrX 149982798 149982850 -16667446 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 1729 949 273 36 166 chrX 149982850 149983009 -16667287 - ORR1D2 LTR MaLR -220 150 1 1 1729 450 0 0 0 chrX 149983011 149983061 -16667235 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1729 1305 286 24 8 chrX 149983063 149983563 -16666733 - L1MA4 LINE L1 -368 5932 5425 1 1729 2965 199 24 92 chrX 149984047 149984199 -16666097 + Lx2B LINE L1 6198 6346 -662 1 1729 378 0 0 0 chrX 149984199 149984241 -16666055 + (TTA)n Simple_repeat Simple_repeat 1 42 0 1 1729 2965 191 25 104 chrX 149984241 149984948 -16665348 + Lx2B LINE L1 6339 6994 -6 1 1729 744 151 0 0 chrX 149985948 149986067 -16664229 + L1VL2 LINE L1 283 401 -5934 1 1729 4721 100 42 32 chrX 149986075 149987423 -16662873 + L1VL2 LINE L1 86 1445 -2170 1 1729 898 104 56 0 chrX 149987420 149987564 -16662732 + L1VL2 LINE L1 2188 2339 -1276 1 1729 827 66 0 0 chrX 149987985 149988106 -16662190 - L1_Mm LINE L1 -3713 2170 2050 1 1729 951 43 0 0 chrX 149988104 149988220 -16662076 + L1Md_F2 LINE L1 5471 5586 -297 1 1729 7844 59 0 8 chrX 149988221 149989223 -16661073 + L1Md_F2 LINE L1 5588 6581 -1 1 1729 239 269 51 51 chrX 149990091 149990248 -16660048 - L1M2 LINE L1 -1635 4508 4352 1 1729 872 258 5 19 chrX 149990313 149990526 -16659770 + B3 SINE B2 2 211 -5 1 1729 375 337 0 0 chrX 149991849 149991950 -16658346 - B3 SINE B2 -65 151 51 1 1729 1300 248 18 3 chrX 149992150 149992490 -16657806 + Lx9 LINE L1 7121 7465 -179 1 1729 183 42 0 0 chrX 149992503 149992527 -16657769 + (TAA)n Simple_repeat Simple_repeat 2 25 0 1 1729 492 234 48 28 chrX 149992791 149992936 -16657360 - ORR1D1 LTR MaLR -1 373 226 1 1729 228 254 0 0 chrX 149993343 149993398 -16656898 + (TTG)n Simple_repeat Simple_repeat 3 57 0 1 1729 394 156 112 38 chrX 149994634 149994714 -16655582 + B4 SINE B4 1 86 -206 1 1729 1195 61 0 0 chrX 149994723 149994871 -16655425 + B1_Mus1 SINE Alu 1 148 0 1 1729 216 0 0 0 chrX 149994871 149994895 -16655401 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1729 268 258 32 0 chrX 149994919 149994981 -16655315 + B1F2 SINE Alu 6 69 -80 1 1729 240 289 26 26 chrX 149994981 149994997 -16655299 + B4 SINE B4 91 168 -124 1 1729 411 333 8 37 chrX 149995011 149995145 -16655151 + B4 SINE B4 81 210 -82 1 1729 186 128 0 0 chrX 149995242 149995281 -16655015 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1729 232 260 14 0 chrX 149995285 149995358 -16654938 + (CATA)n Simple_repeat Simple_repeat 3 76 0 1 1729 1769 274 83 17 chrX 149995628 149996263 -16654033 - Lx8 LINE L1 -4 7469 6793 1 1729 408 104 0 0 chrX 149996286 149996353 -16653943 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1729 366 291 35 0 chrX 149996390 149996476 -16653820 - RSINE1 SINE B4 -64 101 13 1 1729 569 269 6 40 chrX 149996485 149996659 -16653637 - Lx8 LINE L1 -672 6801 6634 1 1729 279 194 31 31 chrX 149997090 149997154 -16653142 - ORR1D1 LTR MaLR -352 69 6 1 1729 656 259 13 13 chrX 149997275 149997424 -16652872 + B1_Mur2 SINE Alu 1 149 0 1 1729 632 232 152 31 chrX 149997641 149997832 -16652464 - B3 SINE B2 0 216 3 1 1729 632 128 0 0 chrX 149998117 149998211 -16652085 + B1_Mus1 SINE Alu 16 109 -39 1 1729 524 243 67 7 chrX 149998215 149998364 -16651932 - L1_Rod LINE L1 -976 4871 4714 1 1729 823 345 44 16 chrX 149998384 149998849 -16651447 + Lx9 LINE L1 6216 6799 -845 1 1729 227 182 36 0 chrX 149998880 149998935 -16651361 + L1_Rod LINE L1 5270 5326 -521 1 1729 442 328 50 16 chrX 149999417 149999659 -16650637 - Lx8 LINE L1 -256 7217 6968 1 1729 229 343 76 0 chrX 149999687 149999792 -16650504 - PB1D10 SINE Alu 0 117 5 1 1729 370 237 10 31 chrX 150000322 150000418 -16649878 - L1MD LINE L1 -655 5704 5611 1 1729 863 175 82 0 chrX 150000534 150000717 -16649579 - Lx3C LINE L1 -5 6971 6774 2 1729 5170 151 78 29 chrX 150000715 150001715 -16648581 - L1_Mur1 LINE L1 -368 5518 4470 3 1729 664 229 0 14 chrX 150001757 150001899 -16648397 - ORR1D1 LTR MaLR -2 372 233 4 1729 26 0 0 0 chrX 150002967 150002993 -16647303 + AT_rich Low_complexity Low_complexity 1 26 0 5 1729 275 225 54 33 chrX 150004309 150004401 -16645895 + PB1D10 SINE Alu 23 116 -1 6 1729 302 282 17 17 chrX 150004501 150004620 -16645676 - L1M4 LINE L1 -358 5816 5698 7 1729 800 294 80 34 chrX 150004657 150005006 -16645290 - MLT1A0 LTR MaLR 0 365 1 8 1729 234 286 71 0 chrX 150005041 150005111 -16645185 + MIRc SINE MIR 34 108 -160 9 1729 4079 59 49 0 chrX 150005252 150005778 -16644518 + L1Md_F2 LINE L1 6031 6582 0 1 1729 30154 89 7 3 chrX 150006159 150011030 -16639266 - L1_Mus1 LINE L1 -1 6566 1669 1 1729 853 75 0 0 chrX 150011030 150011137 -16639159 - U6 snRNA snRNA 0 107 1 1 1729 805 232 48 13 chrX 150012411 150012638 -16637658 + L1MB3 LINE L1 5944 6178 -5 1 1729 233 188 0 94 chrX 150012646 150012699 -16637597 + Kanga11a DNA Tc2 627 674 -296 1 1729 2137 76 0 10 chrX 150012894 150013185 -16637111 - L1Md_F2 LINE L1 -4 6578 6291 1 1729 302 139 0 110 chrX 150013545 150013585 -16636711 - L1Md_F2 LINE L1 -534 6048 6014 1 1729 2920 29 6 0 chrX 150013585 150013929 -16636367 - ORR1A0 LTR MaLR 0 346 1 1 1729 302 83 0 111 chrX 150013929 150013961 -16636335 - L1Md_F2 LINE L1 -568 6014 5985 1 1729 395 119 15 0 chrX 150013962 150014029 -16636267 + (TCTCCC)n Simple_repeat Simple_repeat 3 70 0 1 1729 23 0 0 0 chrX 150014029 150014052 -16636244 + AT_rich Low_complexity Low_complexity 1 23 0 1 1729 773 185 6 0 chrX 150014052 150014230 -16636066 + (TA)n Simple_repeat Simple_repeat 1 179 0 2 1729 6183 118 33 1 chrX 150014534 150015505 -16634791 + L1VL1 LINE L1 392 1391 -4486 2 1729 22831 110 10 8 chrX 150015540 150019092 -16631204 + L1VL1 LINE L1 1318 4876 -1007 2 1729 1415 81 208 0 chrX 150019089 150019310 -16630986 - L1_Mm LINE L1 -176 5707 5441 2 1729 7751 51 24 2 chrX 150019303 150020546 -16629750 - L1Md_F2 LINE L1 0 6582 5307 2 1729 376 316 56 61 chrX 150020621 150020820 -16629476 + L1M4 LINE L1 3276 3471 -2675 2 1729 1546 109 13 4 chrX 150020820 150021059 -16629237 + Lx3_Mus LINE L1 6761 7001 -8 2 1729 376 316 56 61 chrX 150021059 150021321 -16628975 + L1M4 LINE L1 3472 3734 -2412 2 1729 368 247 0 0 chrX 150021344 150021417 -16628879 + ID4 SINE ID 1 73 -10 2 1729 661 161 177 12 chrX 150021501 150021546 -16628750 - B2_Mm2 SINE B2 -3 192 144 2 1729 846 30 0 0 chrX 150021546 150021647 -16628649 + (TA)n Simple_repeat Simple_repeat 1 101 0 2 1729 661 161 177 12 chrX 150021647 150021765 -16628531 - B2_Mm2 SINE B2 -52 143 2 2 1729 408 143 0 0 chrX 150022162 150022232 -16628064 + (TA)n Simple_repeat Simple_repeat 2 71 0 2 1729 1197 96 51 6 chrX 150022324 150022502 -16627794 - B2_Mm2 SINE B2 -8 187 2 3 1729 799 172 8 0 chrX 150022715 150022843 -16627453 + B1_Mur4 SINE Alu 3 131 -19 3 1729 1238 99 6 0 chrX 150022871 150023042 -16627254 - B2_Mm2 SINE B2 -23 172 1 3 1729 5014 45 15 17 chrX 150023056 150023706 -16626590 - L1_Mus2 LINE L1 0 6566 5918 3 1729 204 111 0 0 chrX 150023779 150023815 -16626481 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 3 1729 224 297 0 0 chrX 150024053 150024127 -16626169 + (TA)n Simple_repeat Simple_repeat 1 74 0 3 1729 279 213 124 110 chrX 150025086 150025228 -16625068 + MT2B LTR ERVL 124 253 -331 3 1729 485 165 111 13 chrX 150025141 150025242 -16625054 + B1_Mus1 SINE Alu 16 124 -24 3 1729 33253 80 4 6 chrX 150025243 150030897 -16619399 + L1Md_F2 LINE L1 98 5586 -297 3 1729 8090 45 1 2 chrX 150030897 150031892 -16618404 + L1Md_F2 LINE L1 5587 6580 -2 3 1729 225 65 0 0 chrX 150031925 150031956 -16618340 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1729 887 242 149 21 chrX 150031988 150032395 -16617901 + L1M4c LINE L1 1542 2155 -3928 4 1729 289 361 61 34 chrX 150032478 150032742 -16617554 + LTR85b LTR Gypsy? 311 581 -203 4 1729 416 234 146 15 chrX 150032810 150032940 -16617356 + B3A SINE B2 2 148 -50 4 1729 22 35 0 0 chrX 150033315 150033344 -16616952 + AT_rich Low_complexity Low_complexity 1 29 0 4 1729 1086 124 117 15 chrX 150034404 150034609 -16615687 + URR1A DNA MER1_type 1 226 0 4 1729 17871 88 24 6 chrX 150035279 150038577 -16611719 - L1VL2 LINE L1 -1 3614 253 4 1729 549 294 6 58 chrX 150038726 150038899 -16611397 + RSINE1 SINE B4 2 165 0 4 1729 22 35 0 0 chrX 150038924 150038953 -16611343 + AT_rich Low_complexity Low_complexity 1 29 0 4 1729 483 178 0 45 chrX 150039062 150039174 -16611122 - Lx2B LINE L1 -6 6994 6888 4 1729 268 259 93 0 chrX 150039518 150039657 -16610639 + Lx9 LINE L1 7492 7643 -1 4 1729 5499 88 22 8 chrX 150040268 150041047 -16609249 - L1_Mus4 LINE L1 -6 6630 5841 5 1729 222 313 117 68 chrX 150041058 150041161 -16609135 - PB1D9 SINE Alu -8 112 5 5 1729 30 27 0 0 chrX 150041161 150041198 -16609098 + AT_rich Low_complexity Low_complexity 1 37 0 5 1729 743 90 0 0 chrX 150041276 150041376 -16608920 - B1_Mm SINE Alu 0 147 48 5 1729 263 325 31 62 chrX 150041321 150041449 -16608847 - MT2B LTR ERVL -344 257 134 5 1729 632 179 0 0 chrX 150041577 150041683 -16608613 + B1_Mur3 SINE Alu 23 128 -21 5 1729 294 50 0 0 chrX 150042149 150042189 -16608107 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1729 632 286 1 2 chrX 150042200 150042355 -16607941 - B3A SINE B2 -47 169 16 5 1729 1119 123 0 12 chrX 150042657 150042670 -16607626 - B2_Mm2 SINE B2 -24 171 159 5 1729 279 0 0 0 chrX 150042670 150042701 -16607595 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 5 1729 1119 123 0 12 chrX 150042701 150042859 -16607437 - B2_Mm2 SINE B2 -37 158 2 5 1729 809 164 6 0 chrX 150043509 150043668 -16606628 + CT-rich Low_complexity Low_complexity 1 160 0 6 1729 1709 159 153 39 chrX 150044961 150045347 -16604949 + RMER16 LTR ERVK 20 449 -84 6 1729 432 0 0 0 chrX 150045347 150045395 -16604901 + (CAAAA)n Simple_repeat Simple_repeat 5 52 0 6 1729 811 276 92 29 chrX 150045637 150046072 -16604224 + L1M2 LINE L1 5103 5588 -712 6 1729 1625 129 12 76 chrX 150046072 150046416 -16603880 + RLTRETN_Mm LTR ERVK 1 322 0 6 1729 811 274 58 35 chrX 150046416 150046568 -16603728 + L1M2 LINE L1 5589 5736 -564 6 1729 182 80 80 0 chrX 150046598 150046648 -16603648 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 1729 431 307 143 40 chrX 150046691 150046942 -16603354 - ORR1E LTR MaLR -6 353 77 6 1729 1118 105 51 28 chrX 150047058 150047235 -16603061 - B2_Mm2 SINE B2 -13 182 2 6 1729 574 284 8 0 chrX 150047496 150047623 -16602673 + RSINE1 SINE B4 2 129 -36 6 1729 644 106 0 39 chrX 150048324 150048452 -16601844 + L1_Mus3 LINE L1 6509 6631 -7 6 1729 730 102 16 8 chrX 150049149 150049277 -16601019 - L1_Mus3 LINE L1 -6 6632 6504 7 1729 714 304 99 46 chrX 150049862 150050508 -16599788 + L1M2 LINE L1 1637 2371 -4178 7 1729 366 23 0 0 chrX 150050508 150050551 -16599745 + (TTATA)n Simple_repeat Simple_repeat 4 46 0 7 1729 714 297 103 45 chrX 150050551 150050881 -16599415 + L1M2 LINE L1 2354 2700 -3888 7 1729 389 253 18 35 chrX 150051044 150051202 -16599094 + Lx7 LINE L1 7563 7680 -16 7 1729 606 303 29 4 chrX 150051218 150051457 -16598839 + L1_Mur3 LINE L1 2129 2373 -3507 7 1729 504 318 20 13 chrX 150051477 150051630 -16598666 + RSINE1 SINE B4 10 163 -2 7 1729 604 250 39 0 chrX 150051785 150051913 -16598383 + B3A SINE B2 18 150 -48 7 1729 201 74 0 0 chrX 150051915 150051942 -16598354 + (CATATA)n Simple_repeat Simple_repeat 5 31 0 7 1729 588 189 13 32 chrX 150052047 150052205 -16598091 + L1_Rod LINE L1 1563 1717 -4130 7 1729 269 267 22 22 chrX 150052206 150052298 -16597998 + CT-rich Low_complexity Low_complexity 2 93 0 7 1729 250 238 93 6 chrX 150052306 150052488 -16597808 + RMER17C LTR ERVK 77 274 -136 8 1729 929 235 21 0 chrX 150052491 150052725 -16597571 + L1_Rod LINE L1 1699 1937 -3910 7 1729 697 150 197 0 chrX 150052767 150052914 -16597382 + Lx4B LINE L1 6882 7057 -1 8 1729 2716 267 53 32 chrX 150052954 150054094 -16596202 + L1_Rod LINE L1 1959 3122 -2725 7 1729 246 258 62 0 chrX 150054100 150054197 -16596099 + L1_Mur3 LINE L1 3541 3643 -2234 7 1729 2448 165 90 76 chrX 150054242 150054806 -16595490 + RMER15 LTR ERVL 4 575 0 8 1729 1557 213 26 40 chrX 150054864 150055294 -16595002 + L1_Rod LINE L1 1448 1871 -3976 8 1729 753 236 0 71 chrX 150055656 150055825 -16594471 + B3A SINE B2 42 198 0 8 1729 510 240 39 13 chrX 150056407 150056563 -16593733 + L1M2 LINE L1 5622 5781 -510 8 1729 1939 133 112 3 chrX 150056725 150057063 -16593233 + RMER15 LTR ERVL 201 575 0 8 1729 2094 236 114 12 chrX 150057065 150057636 -16592660 + RMER15-int LTR ERVL 3 631 -4368 8 1729 4783 241 56 23 chrX 150057618 150058941 -16591355 + RMER15-int LTR ERVL 752 2117 -2882 8 1729 329 286 22 36 chrX 150059184 150059322 -16590974 - Lx7 LINE L1 -387 7309 7174 8 1729 237 108 0 0 chrX 150059340 150059377 -16590919 + (TCCA)n Simple_repeat Simple_repeat 2 38 0 8 1729 5157 229 75 10 chrX 150059392 150060629 -16589667 - Lx6 LINE L1 -169 7291 5982 8 1729 540 0 0 0 chrX 150060629 150060689 -16589607 + (TCCC)n Simple_repeat Simple_repeat 1 60 0 9 1729 5157 229 75 10 chrX 150060689 150060802 -16589494 - Lx6 LINE L1 -1479 5981 5852 8 1729 294 261 11 11 chrX 150061531 150061620 -16588676 - L1MCa LINE L1 -6192 316 228 9 1729 661 298 72 80 chrX 150061647 150061910 -16588386 - MTEa LTR MaLR -64 315 55 9 1729 207 108 0 26 chrX 150061911 150061949 -16588347 + (TTTTTG)n Simple_repeat Simple_repeat 4 40 0 9 1729 290 220 0 33 chrX 150061949 150062010 -16588286 - MTEa LTR MaLR -320 59 1 9 1729 327 299 154 19 chrX 150062037 150062296 -16588000 - L1MB1 LINE L1 -257 5911 5618 9 1729 507 309 82 70 chrX 150062603 150062944 -16587352 + L2a LINE L2 2736 3080 -339 9 1729 449 340 0 0 chrX 150062962 150063065 -16587231 + B1F1 SINE Alu 1 103 -46 9 1729 257 370 119 8 chrX 150063133 150063384 -16586912 + L2a LINE L2 3147 3425 -1 9 1729 219 69 0 0 chrX 150063736 150063765 -16586531 + (TTA)n Simple_repeat Simple_repeat 2 30 0 9 1729 461 299 58 14 chrX 150063796 150063935 -16586361 - RSINE1 SINE B4 -17 148 4 9 1729 203 158 0 0 chrX 150064765 150064803 -16585493 + A-rich Low_complexity Low_complexity 4 41 0 9 1729 213 349 0 0 chrX 150065033 150065096 -16585200 - MIRb SINE MIR -179 89 27 1 1729 1750 78 0 0 chrX 150065146 150065376 -16584920 + RMER17A LTR ERVK 1 230 -521 1 1729 22 0 0 0 chrX 150065479 150065501 -16584795 + AT_rich Low_complexity Low_complexity 1 22 0 1 1729 632 256 114 96 chrX 150065604 150065885 -16584411 - Lx9 LINE L1 -941 6703 6418 1 1729 619 152 24 0 chrX 150065956 150066081 -16584215 + (TCTCTG)n Simple_repeat Simple_repeat 3 130 0 1 1729 3480 240 131 40 chrX 150066089 150067768 -16582528 - Lx9 LINE L1 -1289 6184 4302 1 1729 2450 267 117 68 chrX 150067776 150068250 -16582046 + Lx7 LINE L1 6280 6770 -926 1 1729 4605 71 16 2 chrX 150068250 150068855 -16581441 - L1_Mus2 LINE L1 -1 6565 5952 1 1729 2450 267 117 68 chrX 150068855 150069356 -16580940 + Lx7 LINE L1 6771 7303 -393 1 1729 363 230 0 0 chrX 150069391 150069504 -16580792 + (CAGAGA)n Simple_repeat Simple_repeat 2 114 0 1 1729 238 232 22 25 chrX 150069508 150069624 -16580672 + Lx7 LINE L1 7613 7677 -19 1 1729 216 0 0 0 chrX 150069881 150069905 -16580391 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1729 1310 294 126 18 chrX 150070982 150071913 -16578383 + ERVL-B4-int LTR ERVL 4626 5712 -2 1 1729 597 268 13 0 chrX 150071915 150072068 -16578228 + MLT2B4 LTR ERVL 1 155 -401 1 1729 932 278 75 26 chrX 150072068 150072603 -16577693 + L1MA6 LINE L1 5723 6283 -17 1 1729 1310 44 5 0 chrX 150073131 150073522 -16576774 + (TTC)n Simple_repeat Simple_repeat 1 392 0 1 1729 1604 241 135 14 chrX 150073592 150074387 -16575909 + Lx9 LINE L1 5236 6244 -1400 1 1729 796 46 0 18 chrX 150074387 150074498 -16575798 + (TA)n Simple_repeat Simple_repeat 1 109 0 1 1729 1604 240 78 27 chrX 150074498 150074863 -16575433 + Lx9 LINE L1 6245 6638 -1006 1 1729 1115 196 53 31 chrX 150074859 150075180 -16575116 + Lx9 LINE L1 7317 7644 0 1 1729 640 286 19 28 chrX 150075218 150075430 -16574866 + B3 SINE B2 1 210 -6 1 1729 306 0 0 0 chrX 150075697 150075731 -16574565 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1729 387 0 0 0 chrX 150075954 150075997 -16574299 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1729 2596 21 2 182 chrX 150076134 150076602 -16573694 + RLTR10 LTR ERVK 1 384 -6 1 216 7416 30 28 0 chrX 150076616 150077542 -16572754 + RLTR10-int LTR ERVK 41 992 -995 1 1730 8395 19 0 1 chrX 150077822 150078818 -16571478 + RLTR10-int LTR ERVK 990 1984 -3 1 1730 2596 21 2 182 chrX 150078820 150079288 -16571008 + RLTR10 LTR ERVK 1 384 -6 1 1730 5502 139 32 6 chrX 150080495 150081456 -16568840 - Lx LINE L1 -5 6649 5664 1 1730 246 411 5 0 chrX 150082132 150082324 -16567972 + Lx8 LINE L1 7035 7227 -246 1 1730 333 0 0 0 chrX 150082514 150082551 -16567745 + (TTATA)n Simple_repeat Simple_repeat 3 39 0 1 1730 248 294 71 61 chrX 150082698 150082796 -16567500 - ID_B1 SINE B4 -48 176 78 1 1730 22 35 0 0 chrX 150083409 150083438 -16566858 + AT_rich Low_complexity Low_complexity 1 29 0 1 1730 232 220 0 0 chrX 150083452 150083502 -16566794 + L1MC3 LINE L1 7493 7542 -243 1 1730 747 133 370 0 chrX 150083584 150083749 -16566547 - URR1A DNA MER1_type 0 226 1 1 1730 183 139 0 0 chrX 150083831 150083867 -16566429 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1730 2506 205 84 21 chrX 150084210 150085090 -16565206 + RMER1B Other Other 4 1059 -7 1 1730 516 303 68 11 chrX 150085274 150085464 -16564832 - RMER15-int LTR ERVL -4582 417 217 1 1730 1696 294 85 32 chrX 150085493 150086711 -16563585 + L1_Rod LINE L1 4556 5837 -10 1 1730 547 305 35 7 chrX 150086715 150086857 -16563439 + RSINE1 SINE B4 3 148 -17 1 1730 214 308 121 55 chrX 150086857 150086880 -16563416 + B2_Mm2 SINE B2 2 177 -18 1 1730 420 20 0 0 chrX 150086948 150086997 -16563299 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1730 24 0 0 0 chrX 150087839 150087863 -16562433 + AT_rich Low_complexity Low_complexity 1 24 0 1 1730 511 106 29 43 chrX 150087866 150088004 -16562292 + (CAGAGA)n Simple_repeat Simple_repeat 2 137 0 1 1730 1440 275 52 10 chrX 150088323 150088709 -16561587 + MTD LTR MaLR 18 419 0 1 1730 2288 256 162 78 chrX 150088698 150089508 -16560788 + MTD-int LTR MaLR 2 918 -340 1 1730 1356 65 0 26 chrX 150089508 150089698 -16560598 - L1_Mus2 LINE L1 -1 6565 6381 1 1730 2288 256 162 78 chrX 150089698 150089813 -16560483 + MTD-int LTR MaLR 919 1021 -237 1 1730 1153 68 7 0 chrX 150089813 150089959 -16560337 - B1_Mm SINE Alu 0 147 1 1 1730 2288 256 162 78 chrX 150089959 150090031 -16560265 + MTD-int LTR MaLR 1022 1087 -171 1 1730 738 186 0 52 chrX 150090031 150090184 -16560112 - B1_Mur3 SINE Alu 0 149 5 1 1730 2288 256 162 78 chrX 150090184 150090261 -16560035 + MTD-int LTR MaLR 1088 1167 -91 1 1730 2405 166 14 37 chrX 150090263 150090752 -16559544 - L1_Rod LINE L1 -6300 872 395 1 1730 2337 138 19 19 chrX 150090756 150091124 -16559172 + RLTR21 LTR ERVK 8 375 -1197 1 1730 4725 135 38 50 chrX 150091992 150092346 -16557950 + RLTR21 LTR ERVK 361 712 -860 1 1730 626 13 0 0 chrX 150092346 150092425 -16557871 - L1Md_T LINE L1 0 6582 6504 1 1730 4725 135 38 50 chrX 150092425 150092974 -16557322 + RLTR21 LTR ERVK 713 1252 -320 1 1730 542 171 17 0 chrX 150092995 150093112 -16557184 + (TATG)n Simple_repeat Simple_repeat 2 120 0 1 1730 2354 157 57 76 chrX 150093195 150093779 -16556517 + RLTR21 LTR ERVK 1066 1572 0 1 1730 909 274 10 0 chrX 150093790 150094078 -16556218 - L1_Rod LINE L1 -6798 374 84 1 1730 284 268 14 14 chrX 150094105 150094177 -16556119 + MTD-int LTR MaLR 1179 1250 -8 1 1730 1404 279 37 24 chrX 150094212 150094587 -16555709 + MTD LTR MaLR 26 405 -14 1 1730 373 290 50 0 chrX 150094619 150094719 -16555577 - PB1D10 SINE Alu -1 116 12 1 1730 297 0 0 0 chrX 150095679 150095712 -16554584 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1730 631 96 21 0 chrX 150095712 150095806 -16554490 - B1_Mus2 SINE Alu -2 145 50 1 1730 247 216 157 49 chrX 150095909 150096011 -16554285 - MLT1E2 LTR MaLR -2 625 513 1 1730 615 293 72 26 chrX 150096014 150096207 -16554089 + B3A SINE B2 15 216 0 1 1730 2114 211 19 21 chrX 150096236 150096763 -16553533 + L1_Mur3 LINE L1 306 831 -6897 1 1730 1324 164 23 21 chrX 150096805 150097175 -16553121 + L1_Mur3 LINE L1 1065 1425 -4455 1 1730 432 0 0 0 chrX 150097175 150097223 -16553073 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 1730 396 0 0 0 chrX 150097223 150097266 -16553030 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1730 1047 171 43 61 chrX 150097266 150097309 -16552987 + L1_Mur3 LINE L1 1426 1476 -4404 1 1730 218 133 21 62 chrX 150097329 150097377 -16552919 + GA-rich Low_complexity Low_complexity 2 47 0 1 1730 9761 164 32 28 chrX 150097379 150097857 -16552439 + L1_Mur3 LINE L1 2080 2568 -3312 1 1730 330 67 0 0 chrX 150097857 150097902 -16552394 + (CTAA)n Simple_repeat Simple_repeat 3 47 0 1 1730 9761 164 32 28 chrX 150097902 150099555 -16550741 + L1_Mur3 LINE L1 2569 4219 -1661 1 1730 489 47 0 0 chrX 150100194 150100258 -16550038 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 1730 1643 152 8 81 chrX 150100271 150100630 -16549666 + Lx7 LINE L1 7364 7696 0 1 1730 333 219 65 103 chrX 150100695 150100802 -16549494 + MT2A LTR ERVL 366 468 -65 1 1730 465 19 0 0 chrX 150100804 150100858 -16549438 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 1730 279 0 0 0 chrX 150100858 150100888 -16549408 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1730 975 128 34 39 chrX 150100932 150101111 -16549185 + B2_Mm2 SINE B2 3 180 -15 1 1730 3187 138 25 0 chrX 150101112 150101621 -16548675 - RLTR28 LTR ERVL -2 522 1 1 1730 240 86 0 0 chrX 150101629 150101664 -16548632 + MT2A LTR ERVL 493 527 -6 1 1730 226 371 73 30 chrX 150101840 150102004 -16548292 + MIR SINE MIR 72 242 -20 1 1730 300 295 8 37 chrX 150102249 150102383 -16547913 - L1MCb LINE L1 -5289 756 627 1 1730 433 283 18 73 chrX 150102396 150102533 -16547763 - RMER5 LTR ERV1 -11 523 395 1 1730 4160 149 68 68 chrX 150102533 150103435 -16546861 + RLTR13D6 LTR ERVK 1 902 0 1 1730 433 283 18 73 chrX 150103435 150103461 -16546835 - RMER5 LTR ERV1 -140 394 369 1 1730 412 356 67 30 chrX 150103475 150103744 -16546552 - RMER5 LTR ERV1 -223 311 33 1 1730 997 135 7 0 chrX 150104279 150104427 -16545869 + B1_Mur4 SINE Alu 2 150 0 1 1730 214 300 0 0 chrX 150104433 150104483 -16545813 + G-rich Low_complexity Low_complexity 1 50 0 1 1730 317 245 62 84 chrX 150105418 150105446 -16544850 + L1M4 LINE L1 5101 5128 -1018 1 1730 366 23 0 0 chrX 150105446 150105489 -16544807 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1730 317 245 62 84 chrX 150105489 150105581 -16544715 + L1M4 LINE L1 5129 5225 -921 1 1730 636 67 9 0 chrX 150105581 150105686 -16544610 - L1Md_F3 LINE L1 -3 6581 6476 1 1730 317 245 62 84 chrX 150105686 150105742 -16544554 + L1M4 LINE L1 5226 5273 -873 1 1730 458 246 0 0 chrX 150105986 150106101 -16544195 + L1M4 LINE L1 5353 5467 -892 1 1730 285 98 0 0 chrX 150106101 150106142 -16544154 + (TAA)n Simple_repeat Simple_repeat 1 41 0 1 1730 358 287 0 0 chrX 150106142 150106156 -16544140 + L1M4 LINE L1 5468 5481 -878 1 1730 319 283 18 36 chrX 150106197 150106307 -16543989 - L1M4 LINE L1 -495 5679 5572 1 1730 357 279 50 84 chrX 150106364 150106626 -16543670 + L1MB4 LINE L1 5905 6157 -23 1 1730 22 0 0 0 chrX 150106798 150106820 -16543476 + AT_rich Low_complexity Low_complexity 1 22 0 1 1730 747 291 87 61 chrX 150107497 150107654 -16542642 + L1MC1 LINE L1 5816 5962 -371 1 1730 387 0 0 0 chrX 150107654 150107697 -16542599 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1730 747 291 87 61 chrX 150107697 150108044 -16542252 + L1MC1 LINE L1 5963 6333 0 1 1730 518 241 107 77 chrX 150108119 150108290 -16542006 - B3A SINE B2 -1 215 40 1 1730 364 234 153 66 chrX 150108465 150108602 -16541694 + MIR3 SINE MIR 49 197 -11 1 1730 360 111 0 60 chrX 150108969 150109036 -16541260 - B1_Mus2 SINE Alu 0 147 85 1 1730 3358 264 63 45 chrX 150109384 150110459 -16539837 + Lx8 LINE L1 6237 7314 -159 1 1730 2465 166 14 7 chrX 150110459 150110877 -16539419 + MTC LTR MaLR 1 421 0 1 1730 3358 264 63 45 chrX 150110877 150111011 -16539285 + Lx8 LINE L1 7315 7468 -5 1 1730 243 269 66 25 chrX 150111121 150111243 -16539053 + MamRep605 Unknown Unknown 62 188 -688 1 1730 180 282 0 71 chrX 150112173 150112215 -16538081 - L2b LINE L2 -97 3278 3240 1 1730 1246 85 11 11 chrX 150112502 150112681 -16537615 + B2_Mm1t SINE B2 1 179 -14 1 1730 458 88 310 26 chrX 150112747 150112863 -16537433 + B2_Mm2 SINE B2 47 195 0 1 1730 3115 93 0 2 chrX 150112864 150113387 -16536909 - L1Md_F2 LINE L1 -612 5954 5433 1 1730 4504 94 5 8 chrX 150113387 150114017 -16536279 + L1Md_F2 LINE L1 5955 6582 0 1 1730 236 200 0 0 chrX 150114028 150114078 -16536218 + A-rich Low_complexity Low_complexity 1 50 0 1 1730 3297 62 0 1 chrX 150114119 150114622 -16535674 - L1Md_F2 LINE L1 -652 5930 5429 1 1730 4989 71 20 15 chrX 150114622 150115305 -16534991 + L1Md_F2 LINE L1 5896 6582 0 1 1730 1262 260 110 45 chrX 150115594 150116086 -16534210 - RMER5 LTR ERV1 -10 524 1 1 1730 323 305 115 83 chrX 150116091 150116309 -16533987 + MLT1J LTR MaLR 273 497 -15 1 1730 207 328 155 8 chrX 150116373 150116502 -16533794 + MIRb SINE MIR 26 173 -95 1 1730 654 118 0 0 chrX 150117766 150117868 -16532428 + (GGAA)n Simple_repeat Simple_repeat 4 105 0 1 1730 232 279 29 29 chrX 150118210 150118280 -16532016 + ZP3AR Satellite Satellite 23 92 -120 1 1730 968 168 0 112 chrX 150118231 150118446 -16531850 + B2_Mm2 SINE B2 1 191 -4 1 1730 430 272 59 75 chrX 150118896 150119083 -16531213 + RLTR23 LTR ERV1 247 430 0 1 1730 700 149 37 0 chrX 150119083 150119190 -16531106 + B1_Mur2 SINE Alu 38 148 -1 1 1730 590 206 68 68 chrX 150119314 150119345 -16530951 - B1_Mur3 SINE Alu -1 148 115 1 1730 198 0 0 0 chrX 150119345 150119367 -16530929 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 1 1730 598 195 39 4 chrX 150119367 150119481 -16530815 - B1_Mus2 SINE Alu -35 114 3 1 1730 966 255 121 9 chrX 150119709 150120123 -16530173 - Lx9 LINE L1 -27 7617 7064 1 1730 563 0 15 0 chrX 150120583 150120650 -16529646 + (GA)n Simple_repeat Simple_repeat 2 69 0 1 1730 251 390 88 41 chrX 150120655 150120826 -16529470 + MLT1N2 LTR MaLR 296 474 -88 1 1730 372 346 68 24 chrX 150124349 150124622 -16525674 + B4 SINE B4 3 277 -15 2 1730 357 102 0 0 chrX 150124623 150124682 -16525614 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 1730 218 189 19 0 chrX 150124810 150124863 -16525433 - ID4 SINE ID -28 55 2 2 1730 253 355 52 7 chrX 150126341 150126477 -16523819 - MIR SINE MIR -8 254 113 2 1730 857 204 65 19 chrX 150127225 150127440 -16522856 - URR1A DNA MER1_type -1 225 1 2 1730 1128 125 129 5 chrX 150128691 150128892 -16521404 + URR1A DNA MER1_type 1 226 0 2 1730 630 60 0 0 chrX 150130872 150130955 -16519341 + (CAAAG)n Simple_repeat Simple_repeat 3 85 0 2 1730 319 262 47 28 chrX 150131089 150131195 -16519101 - PB1D10 SINE Alu -1 116 9 2 1730 291 339 81 27 chrX 150131365 150131550 -16518746 - L2c LINE L2 -160 3227 3033 2 1730 4641 98 26 1 chrX 150131817 150132479 -16517817 - L1_Mus4 LINE L1 -3 6633 5956 2 1730 3102 93 5 9 chrX 150132499 150133148 -16517148 - L1_Mus3 LINE L1 -7 6631 5747 2 1730 4247 137 1 0 chrX 150133150 150133845 -16516451 + L1_Mm LINE L1 4903 5598 -285 2 1730 1434 206 127 43 chrX 150134091 150134462 -16515834 + MTD LTR MaLR 18 419 0 2 1730 1221 62 0 0 chrX 150134622 150134768 -16515528 - B1_Mus2 SINE Alu -1 146 1 2 1730 249 277 0 30 chrX 150135038 150135105 -16515191 + CT-rich Low_complexity Low_complexity 4 68 0 2 1730 206 262 0 0 chrX 150135107 150135149 -16515147 + (TATATG)n Simple_repeat Simple_repeat 4 45 0 2 1730 1289 194 4 16 chrX 150135538 150135823 -16514473 - MERVL_2A-int LTR ERVL -273 5488 5135 2 1730 294 196 0 0 chrX 150136131 150136187 -16514109 - MLT2B1 LTR ERVL 0 567 512 2 1730 231 254 0 0 chrX 150136195 150136258 -16514038 + (TA)n Simple_repeat Simple_repeat 2 64 0 2 1730 963 287 61 34 chrX 150136301 150136680 -16513616 - RMER5 LTR ERV1 0 534 146 2 1730 280 23 22 43 chrX 150136817 150136863 -16513433 + (CAAAAA)n Simple_repeat Simple_repeat 2 46 0 2 1730 1386 73 16 16 chrX 150137589 150137783 -16512513 + B2_Mm2 SINE B2 2 195 0 2 1730 752 304 35 103 chrX 150138246 150138671 -16511625 + LTR37B LTR ERV1 72 467 -1 2 1730 216 0 0 0 chrX 150139580 150139604 -16510692 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 1730 1458 68 0 0 chrX 150141269 150141460 -16508836 - L1_Mus2 LINE L1 0 6566 6376 2 1730 24 0 0 0 chrX 150141490 150141514 -16508782 + AT_rich Low_complexity Low_complexity 1 24 0 2 1730 528 311 0 7 chrX 150141682 150141834 -16508462 + RMER5 LTR ERV1 244 394 -140 2 1730 301 281 8 58 chrX 150142127 150142248 -16508048 + L1MB3 LINE L1 4942 5056 -1090 2 1730 225 317 18 55 chrX 150142959 150143069 -16507227 - LTR90B LTR LTR -221 575 470 2 1730 605 110 60 0 chrX 150143300 150143400 -16506896 - BC1_Mm scRNA scRNA -46 106 1 2 1730 373 250 137 23 chrX 150143400 150143531 -16506765 + L1MB3 LINE L1 5339 5484 -690 2 1730 352 292 27 45 chrX 150143537 150143648 -16506648 + RSINE1 SINE B4 7 115 -50 2 1730 566 260 47 52 chrX 150143747 150143958 -16506338 + L1MB3 LINE L1 5593 5802 -369 2 1730 507 276 47 20 chrX 150143990 150144006 -16506290 - RSINE1 SINE B4 -2 163 147 2 1730 477 0 0 0 chrX 150144006 150144059 -16506237 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 1730 507 276 47 20 chrX 150144059 150144190 -16506106 - RSINE1 SINE B4 -19 146 13 2 1730 298 271 97 16 chrX 150144198 150144322 -16505974 + L1MB3 LINE L1 5816 5949 -234 2 1730 1313 178 69 18 chrX 150144361 150144636 -16505660 + Lx4B LINE L1 6761 7049 -9 2 1730 582 283 14 0 chrX 150144669 150144814 -16505482 - B3A SINE B2 -18 180 34 2 1730 2157 155 30 3 chrX 150144866 150145235 -16505061 - RLTR14 LTR ERV1 -3 379 1 2 1730 3724 137 195 7 chrX 150145235 150146333 -16503963 - RLTR14-int LTR ERV1 0 5317 4017 2 1730 1456 60 22 0 chrX 150146333 150146517 -16503779 - B2_Mm2 SINE B2 -5 190 3 2 1730 2837 199 109 98 chrX 150146555 150147410 -16502886 - RLTR14-int LTR ERV1 -4096 1221 376 2 1730 513 0 0 0 chrX 150147410 150147467 -16502829 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1730 585 0 0 0 chrX 150147474 150147539 -16502757 + (GA)n Simple_repeat Simple_repeat 2 66 0 2 1730 2837 199 109 98 chrX 150147539 150147680 -16502616 - RLTR14-int LTR ERV1 -4947 370 207 2 1730 5709 124 22 32 chrX 150147688 150148645 -16501651 - Lx3A LINE L1 -4 6977 6031 2 1730 2349 131 2 70 chrX 150148717 150149120 -16501176 - RLTR14 LTR ERV1 0 382 7 2 1730 472 346 44 32 chrX 150149222 150149380 -16500916 + RSINE1 SINE B4 4 163 -2 2 1730 238 343 82 71 chrX 150149233 150149415 -16500881 + B3A SINE B2 14 197 -1 2 1730 1031 249 86 20 chrX 150149937 150150881 -16499415 + L1_Mur3 LINE L1 843 1861 -4019 2 1730 1347 239 34 34 chrX 150150879 150151447 -16498849 + Lx7 LINE L1 6638 7257 -439 2 1730 832 153 61 22 chrX 150151497 150151677 -16498619 - B2_Mm2 SINE B2 -4 191 5 2 1730 225 246 0 0 chrX 150151723 150151780 -16498516 + T-rich Low_complexity Low_complexity 2 58 0 2 1730 7247 70 5 1 chrX 150152112 150153260 -16497036 + L1_Mus1 LINE L1 5404 6553 -14 2 1730 332 335 60 11 chrX 150153266 150153450 -16496846 + L1MB7 LINE L1 5947 6139 -45 2 1730 2876 77 39 2 chrX 150153496 150153902 -16496394 - BGLII LTR ERVK 0 421 1 2 1730 657 232 115 11 chrX 150154242 150154425 -16495871 + B3 SINE B2 4 205 -11 2 1730 573 181 86 8 chrX 150154498 150154626 -16495670 + B1_Mur1 SINE Alu 5 142 -7 2 1730 1014 141 0 0 chrX 150154800 150154949 -16495347 - B1_Mur4 SINE Alu 0 150 2 2 1730 332 245 28 28 chrX 150155375 150155484 -16494812 + L1MB2 LINE L1 6061 6169 -2 2 1730 441 235 218 8 chrX 150155493 150155545 -16494751 + ID SINE ID 2 81 -143 2 1730 277 319 8 72 chrX 150155545 150155648 -16494648 + PB1D10 SINE Alu 1 100 -17 2 1730 2415 79 28 0 chrX 150155648 150155965 -16494331 - ORR1A2 LTR MaLR 0 327 2 2 1730 277 319 8 72 chrX 150155965 150155986 -16494310 + PB1D10 SINE Alu 101 117 0 2 1730 447 335 60 13 chrX 150156372 150156523 -16493773 + MER20 DNA MER1_type 7 164 -55 2 1730 252 0 0 0 chrX 150156523 150156551 -16493745 + (TC)n Simple_repeat Simple_repeat 1 28 0 2 1730 378 0 0 0 chrX 150156551 150156592 -16493704 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1730 22 35 0 0 chrX 150157002 150157031 -16493265 + AT_rich Low_complexity Low_complexity 1 29 0 2 1730 187 304 18 0 chrX 150157050 150157106 -16493190 - L2b LINE L2 -10 3365 3309 2 1730 357 262 79 72 chrX 150157458 150157610 -16492686 - MER104 DNA Tc2 0 181 29 2 1730 180 0 0 0 chrX 150159702 150159722 -16490574 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1730 25 0 0 0 chrX 150160385 150160410 -16489886 + AT_rich Low_complexity Low_complexity 1 25 0 2 1730 905 73 16 0 chrX 150160835 150160958 -16489338 - B1_Mus2 SINE Alu 0 147 23 2 1730 235 237 46 118 chrX 150160974 150161127 -16489169 - L1MC LINE L1 -2159 3987 3846 2 1730 498 246 81 47 chrX 150161261 150161410 -16488886 - B4 SINE B4 -137 155 2 2 1730 331 296 156 6 chrX 150161425 150161605 -16488691 - L1M5 LINE L1 -3003 3143 2937 2 1730 1028 226 15 0 chrX 150161653 150161857 -16488439 - B3 SINE B2 -9 207 1 2 1730 970 154 7 0 chrX 150161991 150162140 -16488156 - B1_Mur4 SINE Alu 0 150 1 2 1730 541 254 28 14 chrX 150162221 150162365 -16487931 + B1_Mur1 SINE Alu 2 147 -2 2 1730 688 283 87 56 chrX 150162645 150163177 -16487119 - L1MC4 LINE L1 -378 7664 7117 2 1730 382 296 166 51 chrX 150163373 150163704 -16486592 - L1M5 LINE L1 -3180 2966 2598 2 1730 996 138 0 0 chrX 150163860 150163998 -16486298 - B1_Mur1 SINE Alu -10 139 2 2 1730 409 348 38 19 chrX 150164070 150164228 -16486068 - RSINE1 SINE B4 -2 163 3 2 1730 189 175 0 0 chrX 150164449 150164489 -16485807 + (CATA)n Simple_repeat Simple_repeat 2 41 0 2 1730 341 291 50 50 chrX 150164661 150164900 -16485396 - L1MC4 LINE L1 -387 7655 7417 2 1730 6676 95 25 0 chrX 150165274 150166370 -16483926 - L1_Mus4 LINE L1 -60 6576 5454 2 1730 1235 220 58 0 chrX 150166367 150166662 -16483634 - L1VL4 LINE L1 -5906 396 85 2 1730 264 167 0 0 chrX 150166679 150166727 -16483569 - B3 SINE B2 -7 209 162 2 1730 529 231 83 33 chrX 150166730 150166851 -16483445 - B1_Mur1 SINE Alu -21 128 2 2 1730 1231 315 106 32 chrX 150166867 150167451 -16482845 - MLT1E2 LTR MaLR 0 627 1 2 1730 1243 207 28 62 chrX 150167764 150168053 -16482243 - ORR1E LTR MaLR -6 353 75 2 1730 330 288 58 105 chrX 150168047 150168218 -16482078 - ORR1D2 LTR MaLR -206 164 2 2 1730 844 194 7 0 chrX 150168481 150168625 -16481671 + B1_Mur1 SINE Alu 1 145 -4 2 1730 248 0 0 30 chrX 150168636 150168669 -16481627 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 2 1730 489 230 13 73 chrX 150168927 150169077 -16481219 - Lx6 LINE L1 -10 7450 7310 2 1730 1293 226 7 0 chrX 150169075 150169354 -16480942 + Lx6 LINE L1 6455 6735 -725 2 1730 401 36 18 0 chrX 150170051 150170106 -16480190 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1730 252 0 0 0 chrX 150170106 150170133 -16480163 + (GA)n Simple_repeat Simple_repeat 1 28 0 2 1730 22 0 0 0 chrX 150171856 150171878 -16478418 + AT_rich Low_complexity Low_complexity 1 22 0 2 1730 219 390 0 0 chrX 150171900 150171977 -16478319 + ID4 SINE ID 3 79 -4 2 1730 488 275 7 55 chrX 150172097 150172243 -16478053 - ID_B1 SINE B4 -5 219 81 2 1730 562 274 55 93 chrX 150172449 150172759 -16477537 + MER2 DNA MER2_type 1 298 -47 2 1730 191 88 0 29 chrX 150173152 150173187 -16477109 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 2 1730 242 228 266 21 chrX 150173188 150173282 -16477014 - PB1D10 SINE Alu 0 117 1 2 1730 309 261 39 56 chrX 150173822 150173924 -16476372 + ID_B1 SINE B4 70 166 -58 2 1730 640 234 83 116 chrX 150173952 150174228 -16476068 + B4 SINE B4 8 274 -18 2 1730 563 136 0 28 chrX 150174269 150174375 -16475921 + (TA)n Simple_repeat Simple_repeat 1 103 0 2 1730 1269 87 10 47 chrX 150174574 150174766 -16475530 + B2_Mm1t SINE B2 1 185 -8 2 1730 401 297 0 56 chrX 150174845 150174975 -16475321 + B1F1 SINE Alu 1 120 0 2 1730 404 0 39 0 chrX 150175061 150175112 -16475184 + (TATG)n Simple_repeat Simple_repeat 2 54 0 3 1730 446 352 83 40 chrX 150175452 150175801 -16474495 + MamRep605 Unknown Unknown 499 862 -14 3 1730 302 288 0 0 chrX 150176031 150176097 -16474199 + ID4 SINE ID 1 66 -17 3 1730 665 297 131 7 chrX 150176680 150177131 -16473165 + L1M4 LINE L1 4574 5080 -1066 3 1730 544 200 18 18 chrX 150177422 150177534 -16472762 + PB1D9 SINE Alu 2 113 -7 3 1730 1055 152 152 0 chrX 150178551 150178781 -16471515 - Lx5 LINE L1 -1 7049 6785 3 1730 342 0 0 0 chrX 150179012 150179050 -16471246 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1730 617 253 87 17 chrX 150179052 150179293 -16471003 - Lx9 LINE L1 -153 7491 7234 3 1730 813 254 9 23 chrX 150179923 150180141 -16470155 + B3 SINE B2 1 215 -1 3 1730 318 219 157 8 chrX 150180226 150180409 -16469887 + L1M2a LINE L1 2067 2279 -4889 3 1730 528 316 15 8 chrX 150180493 150180627 -16469669 - ID_B1 SINE B4 -9 215 81 3 1730 1327 84 17 0 chrX 150180744 150180922 -16469374 - B2_Mm2 SINE B2 -14 181 1 3 1730 3123 272 24 39 chrX 150180996 150181588 -16468708 + Lx8 LINE L1 6258 6847 -626 3 1730 694 144 60 93 chrX 150181588 150181771 -16468525 - B2_Mm2 SINE B2 -18 177 1 3 1730 3123 272 24 39 chrX 150181771 150182170 -16468126 + Lx8 LINE L1 6848 7234 -239 3 1730 234 226 0 0 chrX 150182365 150182427 -16467869 + L1M2a LINE L1 2516 2577 -4521 3 1730 273 233 10 118 chrX 150182584 150182606 -16467690 + Lx8 LINE L1 6908 6928 -545 3 1730 459 0 0 0 chrX 150182606 150182657 -16467639 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1730 1188 43 0 0 chrX 150182659 150182800 -16467496 - B1_Mm SINE Alu -6 141 1 3 1730 273 233 10 118 chrX 150182800 150182876 -16467420 + Lx8 LINE L1 6929 6998 -475 3 1730 508 313 34 135 chrX 150182995 150183320 -16466976 + ORR1E LTR MaLR 1 292 -67 3 1730 1365 194 92 19 chrX 150183475 150183886 -16466410 - L1_Rod LINE L1 -2257 3590 3150 3 1730 856 173 37 5 chrX 150183886 150184083 -16466213 - B2_Mm2 SINE B2 -1 215 1 3 1730 906 106 16 0 chrX 150184145 150184268 -16466028 - B2_Mm2 SINE B2 -70 125 1 3 1730 729 168 19 131 chrX 150184271 150184538 -16465758 - L1_Rod LINE L1 -2819 3028 2792 3 1730 192 179 0 0 chrX 150184539 150184578 -16465718 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 1730 305 309 33 92 chrX 150184634 150184787 -16465509 - MIR SINE MIR -112 150 7 3 1730 1316 195 139 0 chrX 150184879 150185181 -16465115 - Lx5 LINE L1 -3 7047 6704 3 1730 1031 193 166 20 chrX 150185180 150185529 -16464767 - L1_Rod LINE L1 -3096 2751 2352 3 1730 1062 230 7 36 chrX 150185527 150185834 -16464462 + L1_Rod LINE L1 4088 4385 -1462 3 1730 705 173 216 4 chrX 150185838 150185967 -16464329 + Lx9 LINE L1 7343 7515 -129 3 1730 396 55 0 0 chrX 150185967 150186022 -16464274 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 1730 705 173 216 4 chrX 150186022 150186124 -16464172 + Lx9 LINE L1 7516 7623 -21 3 1730 22 35 0 0 chrX 150186127 150186156 -16464140 + AT_rich Low_complexity Low_complexity 1 29 0 3 1730 14090 229 54 25 chrX 150186320 150187781 -16462515 + L1_Mur3 LINE L1 26 1298 -6430 3 1730 6558 82 22 1 chrX 150187781 150188672 -16461624 - Lx3_Mus LINE L1 0 7009 6100 3 1730 14090 154 46 49 chrX 150188672 150189516 -16460780 + L1_Mur3 LINE L1 1299 2079 -3801 3 1730 240 35 0 0 chrX 150189516 150189545 -16460751 + (CCA)n Simple_repeat Simple_repeat 1 29 0 3 1730 14090 154 46 49 chrX 150189545 150189743 -16460553 + L1_Mur3 LINE L1 2080 2283 -3597 3 1730 4207 50 2 0 chrX 150189743 150190243 -16460053 + RLTR1C LTR ERV1 3 503 0 3 1730 14090 154 46 49 chrX 150190243 150191954 -16458342 + L1_Mur3 LINE L1 2284 4062 -1818 3 1730 534 16 0 0 chrX 150191954 150192017 -16458279 + (TC)n Simple_repeat Simple_repeat 1 63 0 3 1730 14090 154 46 49 chrX 150192017 150192303 -16457993 + L1_Mur3 LINE L1 4063 4346 -1534 3 1730 1448 191 140 7 chrX 150192319 150192619 -16457677 + Lx6 LINE L1 6949 7288 -172 3 1730 832 265 67 0 chrX 150192622 150192965 -16457331 - ERVL-B4-int LTR ERVL -238 5519 5154 3 1730 1202 251 22 52 chrX 150193114 150193483 -16456813 - ERVL-B4-int LTR ERVL -812 4902 4545 3 1730 2213 138 3 0 chrX 150193649 150193975 -16456321 - ORR1A2 LTR MaLR 0 327 1 3 1730 234 245 81 9 chrX 150194040 150194151 -16456145 - Lx8 LINE L1 -3 7470 7352 3 1730 504 249 103 69 chrX 150194324 150194527 -16455769 - L1MA5 LINE L1 -493 7151 6942 3 1730 330 167 0 0 chrX 150194546 150194606 -16455690 + GA-rich Low_complexity Low_complexity 5 64 0 3 1730 22 0 0 0 chrX 150194606 150194628 -16455668 + AT_rich Low_complexity Low_complexity 1 22 0 3 1730 372 316 31 126 chrX 150194647 150194806 -16455490 + RSINE1 SINE B4 1 144 -21 3 1730 395 337 47 16 chrX 150195093 150195349 -16454947 + L1M3a LINE L1 12 275 -5680 3 1730 2233 84 61 7 chrX 150195642 150195952 -16454344 + ORR1A2 LTR MaLR 1 327 0 3 1730 450 0 0 0 chrX 150196150 150196200 -16454096 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 1730 270 0 0 0 chrX 150196200 150196229 -16454067 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1730 189 0 0 0 chrX 150196229 150196249 -16454047 + (GA)n Simple_repeat Simple_repeat 2 22 0 3 1730 873 282 115 7 chrX 150196609 150197027 -16453269 - L1M2 LINE L1 -1950 4193 3731 3 1730 674 172 25 0 chrX 150197027 150197184 -16453112 + (TA)n Simple_repeat Simple_repeat 1 161 0 3 1730 982 275 43 23 chrX 150197226 150197531 -16452765 + Tigger5 DNA MER2_type 494 804 -1602 3 1730 898 212 81 90 chrX 150197541 150197898 -16452398 - RLTR40 LTR ERVK -320 497 144 3 1730 760 298 57 72 chrX 150198007 150198564 -16451732 - L1MA5 LINE L1 -382 5918 5342 3 1730 3157 130 15 10 chrX 150198564 150199085 -16451211 + RLTR28 LTR ERVL 1 524 0 3 1730 283 318 29 58 chrX 150199085 150199125 -16451171 - L1MA5 LINE L1 -506 5341 5299 3 1730 644 157 81 54 chrX 150199173 150199321 -16450975 - RMER10B LTR ERVL -53 345 194 3 1730 233 209 0 0 chrX 150199321 150199364 -16450932 + GA-rich Low_complexity Low_complexity 1 43 0 3 1730 23 0 0 0 chrX 150199689 150199712 -16450584 + AT_rich Low_complexity Low_complexity 1 23 0 3 1730 394 264 25 119 chrX 150199713 150199872 -16450424 - RSINE1 SINE B4 -9 156 13 3 1730 427 252 31 9 chrX 150199872 150200033 -16450263 - L1_Mm LINE L1 -391 5492 5299 3 1730 490 322 44 38 chrX 150200034 150200376 -16449920 + Lx8 LINE L1 6956 7299 -174 3 1730 7253 126 19 3 chrX 150200496 150201612 -16448684 - Lx2 LINE L1 -2 6995 5862 3 1730 9394 26 2 4 chrX 150201612 150202821 -16447475 - L1Md_T LINE L1 -5 6577 5374 3 1730 2151 99 132 11 chrX 150202821 150203169 -16447127 - RLTR10 LTR ERVK 0 390 1 3 1730 9394 18 3 7 chrX 150203169 150203801 -16446495 - L1Md_T LINE L1 -510 5373 4740 3 1730 2154 72 0 3 chrX 150203797 150204143 -16446153 - Lx LINE L1 -778 5876 5532 3 1730 548 227 14 77 chrX 150204376 150204454 -16445842 + ID_B1 SINE B4 87 160 -64 3 1730 4207 84 78 87 chrX 150204454 150205212 -16445084 - RMER17A LTR ERVK 0 751 1 3 1730 548 227 14 77 chrX 150205212 150205276 -16445020 + ID_B1 SINE B4 161 220 -4 3 1730 521 242 60 8 chrX 150205389 150205522 -16444774 - MTE2a LTR MaLR -2 377 238 3 1730 403 217 0 0 chrX 150205537 150205606 -16444690 - MTE2a LTR MaLR -310 69 1 3 1730 1875 312 86 30 chrX 150205606 150207351 -16442945 - L1M2 LINE L1 -1274 4869 3027 3 1730 771 188 7 34 chrX 150207375 150207524 -16442772 - B1_Mur4 SINE Alu 0 150 6 3 1730 372 299 6 94 chrX 150207382 150207541 -16442755 - ID_B1 SINE B4 -2 222 78 3 216 32401 54 1 0 chrX 150207726 150209053 -16441243 - L1Md_F2 LINE L1 -12 6570 5244 3 1731 363 44 0 0 chrX 150209053 150209098 -16441198 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 1731 32401 90 5 9 chrX 150209098 150213772 -16436524 - L1Md_F2 LINE L1 -640 5243 590 3 1731 327 296 140 20 chrX 150213780 150214334 -16435962 - L1M2 LINE L1 -3214 2929 2276 3 1731 504 0 0 0 chrX 150214462 150214518 -16435778 + (GA)n Simple_repeat Simple_repeat 1 56 0 3 1731 268 189 18 36 chrX 150214554 150214609 -16435687 - RSINE1 SINE B4 -36 129 76 3 1731 532 280 59 49 chrX 150214609 150214812 -16435484 + Lx8 LINE L1 6862 7066 -407 3 1731 1704 230 58 33 chrX 150214826 150215221 -16435075 - MTD LTR MaLR -14 405 1 3 1731 642 310 0 0 chrX 150215221 150215395 -16434901 + Lx8 LINE L1 7065 7238 -235 3 1731 8723 93 44 1 chrX 150215414 150217451 -16432845 + L1_Mus3 LINE L1 4503 6638 0 3 1731 281 288 35 29 chrX 150217446 150217618 -16432678 + Lx8 LINE L1 7239 7411 -62 3 1731 396 0 0 0 chrX 150217618 150217662 -16432634 + (GA)n Simple_repeat Simple_repeat 2 45 0 3 1731 186 43 0 0 chrX 150219448 150219471 -16430825 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1731 403 342 18 58 chrX 150219495 150219666 -16430630 - B4A SINE B4 -127 165 2 3 1731 2476 92 3 0 chrX 150220135 150220461 -16429835 - ORR1A2 LTR MaLR 0 327 1 3 1731 417 176 0 0 chrX 150220461 150220513 -16429783 - ORR1A2-int LTR MaLR 0 1963 1912 3 1731 3236 41 18 3 chrX 150220513 150220901 -16429395 + MTA_Mm LTR MaLR 1 394 -2 3 1731 417 176 0 0 chrX 150220901 150220922 -16429374 - ORR1A2-int LTR MaLR -52 1911 1891 3 1731 4911 147 97 116 chrX 150220902 150221212 -16429084 + MTC-int LTR MaLR 2 309 -949 3 1731 1682 48 0 5 chrX 150221212 150221423 -16428873 - L1Md_T LINE L1 0 6582 6373 3 1731 4911 147 97 116 chrX 150221423 150221523 -16428773 + MTC-int LTR MaLR 310 393 -865 3 1731 4287 61 18 4 chrX 150221523 150222080 -16428216 + L1Md_F2 LINE L1 6005 6569 -13 3 1731 4911 147 97 116 chrX 150222080 150222292 -16428004 + MTC-int LTR MaLR 394 533 -725 3 1731 2741 95 58 3 chrX 150222284 150222664 -16427632 - L1Md_F2 LINE L1 -4 6578 6178 3 1731 4097 87 26 19 chrX 150222664 150223320 -16426976 + MTC-int LTR MaLR 510 1258 0 3 1731 3395 41 17 32 chrX 150223320 150223722 -16426574 + MTA_Mm LTR MaLR 1 396 0 3 1731 10174 140 59 11 chrX 150223722 150225549 -16424747 - ORR1A2-int LTR MaLR -46 1917 2 3 1731 2697 95 0 0 chrX 150225549 150225876 -16424420 - ORR1A2 LTR MaLR 0 327 1 3 1731 1699 95 118 14 chrX 150226006 150226295 -16424001 + ORR1A2 LTR MaLR 1 319 -8 3 1731 6751 135 50 16 chrX 150226299 150227395 -16422901 + Lx4A LINE L1 5926 7058 0 3 1731 195 42 0 0 chrX 150227406 150227430 -16422866 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 3 1731 1403 209 65 3 chrX 150227766 150227867 -16422429 - RMER1B Other Other 0 1066 953 3 1731 546 54 0 0 chrX 150227867 150227941 -16422355 + (CA)n Simple_repeat Simple_repeat 2 75 0 3 1731 1403 213 375 2 chrX 150227941 150228264 -16422032 - RMER1B Other Other -114 952 515 3 1731 219 273 0 0 chrX 150228335 150228390 -16421906 + T-rich Low_complexity Low_complexity 1 55 0 3 1731 5736 67 4 1 chrX 150228398 150229088 -16421208 - L1_Mus2 LINE L1 0 6566 5875 3 1731 2458 45 3 7 chrX 150229088 150229427 -16420869 + L1_Mus2 LINE L1 5533 5876 -691 3 1731 326 294 35 0 chrX 150229746 150229831 -16420465 + ORR1E LTR MaLR 1 88 -271 3 1731 300 301 19 17 chrX 150229839 150230012 -16420284 + L1M2 LINE L1 2178 2425 -4157 3 1731 381 260 53 42 chrX 150230151 150230340 -16419956 + Lx7 LINE L1 7369 7559 -137 3 1731 260 192 75 49 chrX 150230775 150230865 -16419431 + L1M2 LINE L1 3018 3151 -3694 3 1731 3406 63 2 2 chrX 150230865 150231265 -16419031 + MTB LTR MaLR 1 400 0 3 1731 234 281 199 49 chrX 150231265 150231500 -16418796 + L1M2 LINE L1 3152 3417 -3428 3 1731 553 238 37 87 chrX 150231545 150231706 -16418590 + Lx9 LINE L1 6359 6511 -1133 3 1731 3550 39 0 5 chrX 150231736 150232144 -16418152 - L1Md_F3 LINE L1 -1 6583 6178 3 1731 497 101 27 0 chrX 150232144 150232236 -16418060 + L1Md_F3 LINE L1 5677 5808 -432 3 1731 242 283 94 0 chrX 150232247 150232353 -16417943 + L1M5 LINE L1 2295 2410 -3736 3 1731 450 286 22 58 chrX 150232682 150232792 -16417504 - L1M2 LINE L1 -4788 2061 1954 3 1731 4759 10 0 0 chrX 150232792 150233285 -16417011 - MT2_Mm LTR ERVL 0 493 1 4 1731 450 298 27 58 chrX 150233285 150233627 -16416669 - L1M2 LINE L1 -4875 1974 1636 3 1731 13658 56 1 2 chrX 150233732 150236149 -16414147 - L1Md_F2 LINE L1 0 6582 4167 4 1731 1441 111 0 0 chrX 150236134 150236332 -16413964 - L1Md_F2 LINE L1 -5908 708 511 4 1731 883 228 68 32 chrX 150236552 150236742 -16413554 + B3A SINE B2 1 197 -1 4 1731 1183 176 155 62 chrX 150237410 150237714 -16412582 - IAPEY3_LTR LTR ERVK 0 332 1 4 1731 1048 200 24 0 chrX 150238418 150238623 -16411673 + MTD LTR MaLR 1 210 -209 4 1731 287 217 0 0 chrX 150238624 150238684 -16411612 + Lx7 LINE L1 6966 7025 -671 4 1731 307 336 147 27 chrX 150238684 150238735 -16411561 - 7SLRNA srpRNA srpRNA -143 171 76 4 1731 396 244 0 126 chrX 150238735 150238761 -16411535 - ID_B1 SINE B4 -52 172 154 4 1731 2341 100 12 59 chrX 150238761 150239100 -16411196 - ORR1A2 LTR MaLR -4 323 1 4 1731 11156 139 55 61 chrX 150239100 150241075 -16409221 - ORR1A2-int LTR MaLR 0 1963 1 4 1731 2772 71 3 0 chrX 150241075 150241401 -16408895 - ORR1A2 LTR MaLR 0 327 1 4 1731 307 336 147 27 chrX 150241401 150241471 -16408825 - 7SLRNA srpRNA srpRNA -239 75 6 4 1731 558 137 0 0 chrX 150241522 150241617 -16408679 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 4 1731 841 259 99 53 chrX 150241737 150242039 -16408257 + MTD LTR MaLR 1 316 -105 4 1731 275 19 18 55 chrX 150242039 150242094 -16408202 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 4 1731 8282 35 2 3 chrX 150242104 150243189 -16407107 - L1Md_F2 LINE L1 -3 6579 5497 4 1731 374 216 15 34 chrX 150243189 150243283 -16407013 + MTD LTR MaLR 296 385 -36 4 1731 452 291 63 39 chrX 150243656 150243863 -16406433 + L1MCb LINE L1 536 747 -5298 4 1731 1284 220 68 25 chrX 150245040 150245362 -16404934 - Lx6 LINE L1 -1336 6124 5789 4 1731 205 161 0 0 chrX 150245363 150245394 -16404902 + (TTG)n Simple_repeat Simple_repeat 3 33 0 4 1731 595 277 26 0 chrX 150245408 150245449 -16404847 + Lx5 LINE L1 6168 6208 -842 4 1731 3744 129 88 30 chrX 150245449 150246017 -16404279 + MT2B LTR ERVL 1 601 0 4 1731 595 277 26 0 chrX 150246017 150246130 -16404166 + Lx5 LINE L1 6209 6325 -725 4 1731 656 279 17 79 chrX 150246128 150246369 -16403927 + Lx6 LINE L1 6571 6796 -664 4 1731 1068 205 44 20 chrX 150246401 150246650 -16403646 + Lx6 LINE L1 7184 7438 -22 4 1731 243 0 0 0 chrX 150246656 150246683 -16403613 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 4 1731 425 45 60 0 chrX 150246716 150246783 -16403513 - L1_Mur3 LINE L1 -4148 1732 1662 4 1731 2601 141 23 10 chrX 150246783 150247178 -16403118 - RLTR9D LTR ERVK -3 400 1 4 1731 334 141 40 40 chrX 150247179 150247253 -16403043 - ETnERV2-int LTR ERVK -2 7404 7331 4 1731 14643 184 19 16 chrX 150247458 150250445 -16399851 - ETnERV2-int LTR ERVK -1166 6240 1660 4 1731 556 234 0 0 chrX 150250551 150250658 -16399638 - ETnERV2-int LTR ERVK -1659 1655 1549 4 1731 5624 246 15 21 chrX 150250665 150252178 -16398118 - ETnERV2-int LTR ERVK -1738 1576 8 4 1731 638 129 0 0 chrX 150252178 150252271 -16398025 - RLTR9B2 LTR ERVK -327 93 1 4 1731 5382 172 65 10 chrX 150252272 150253585 -16396711 - L1_Mur3 LINE L1 -4214 1666 297 4 1731 236 271 21 0 chrX 150254066 150254114 -16396182 + ID4_ SINE ID 2 50 -33 4 1731 408 20 0 0 chrX 150254120 150254169 -16396127 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1731 256 281 33 22 chrX 150254360 150254451 -16395845 + MER104 DNA Tc2 44 135 -46 4 1731 1163 97 7 0 chrX 150255209 150255354 -16394942 + B1_Mus2 SINE Alu 2 147 0 4 1731 8296 98 7 8 chrX 150256136 150257330 -16392966 + L1_Mm LINE L1 4113 5304 -579 4 1731 37792 32 2 61 chrX 150257327 150262529 -16387767 + L1_Mus2 LINE L1 439 5475 -408 4 1731 8844 40 1 0 chrX 150262529 150263522 -16386774 + L1Md_T LINE L1 5587 6580 -2 4 1731 37792 53 8 30 chrX 150263522 150264781 -16385515 + L1_Mus2 LINE L1 5476 6565 -1 4 1731 1271 65 20 65 chrX 150264806 150265005 -16385291 + L1Md_F2 LINE L1 6380 6569 -13 4 1731 27 62 0 0 chrX 150265128 150265176 -16385120 + AT_rich Low_complexity Low_complexity 1 48 0 4 1731 894 164 22 0 chrX 150265201 150265335 -16384961 + B1_Mur2 SINE Alu 2 138 -11 4 1731 209 83 28 0 chrX 150265338 150265374 -16384922 + (CAA)n Simple_repeat Simple_repeat 3 39 0 4 1731 22 35 0 0 chrX 150265469 150265498 -16384798 + AT_rich Low_complexity Low_complexity 1 29 0 4 1731 436 202 58 35 chrX 150265616 150265703 -16384593 - RSINE1 SINE B4 -30 135 47 4 1731 232 358 0 0 chrX 150265748 150265815 -16384481 - LTR64 LTR ERV1 -64 464 398 4 1731 210 222 0 0 chrX 150268965 150269010 -16381286 + G-rich Low_complexity Low_complexity 1 45 0 4 1731 198 0 0 0 chrX 150269262 150269284 -16381012 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 4 1731 436 302 113 55 chrX 150270886 150271496 -16378800 - L2a LINE L2 -5 3421 2790 4 1731 699 226 75 0 chrX 150271673 150271806 -16378490 + B1_Mur1 SINE Alu 2 144 -5 4 1731 2260 130 21 78 chrX 150272141 150272375 -16377921 - RMER17C LTR ERVK 0 410 185 4 1731 789 90 0 0 chrX 150272375 150272486 -16377810 + (GAA)n Simple_repeat Simple_repeat 1 111 0 4 1731 2260 130 21 78 chrX 150272486 150272686 -16377610 - RMER17C LTR ERVK -226 184 1 4 1731 627 284 85 17 chrX 150272916 150273152 -16377144 + LTR40a LTR ERVL 1 252 -267 4 1731 1130 116 40 11 chrX 150274765 150274940 -16375356 + B2_Mm2 SINE B2 1 180 -15 4 1731 890 242 14 9 chrX 150275542 150275755 -16374541 + RMER5 LTR ERV1 8 221 -313 4 1731 238 167 18 18 chrX 150275751 150275806 -16374490 + RMER5 LTR ERV1 167 221 -313 4 1731 1747 188 22 17 chrX 150275802 150276164 -16374132 + RMER5 LTR ERV1 167 530 -4 4 1731 432 0 0 0 chrX 150276795 150276843 -16373453 + (TC)n Simple_repeat Simple_repeat 1 48 0 4 1731 225 0 0 0 chrX 150276843 150276867 -16373429 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 1731 273 316 0 13 chrX 150276910 150276987 -16373309 + ID4_ SINE ID 7 82 -1 4 1731 183 129 0 0 chrX 150276995 150277026 -16373270 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 4 1731 930 285 113 28 chrX 150277032 150277816 -16372480 + L1M2 LINE L1 2710 3568 -3277 4 1731 3227 133 52 19 chrX 150277928 150278522 -16371774 + RMER6A LTR ERVK 1 647 -109 4 1731 1569 243 73 72 chrX 150278489 150279142 -16371154 - RMER6C LTR ERVK -36 654 1 4 1731 516 16 0 0 chrX 150279236 150279297 -16370999 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 4 1731 678 276 6 26 chrX 150279301 150279457 -16370839 - RSINE1 SINE B4 -11 154 2 4 1731 1094 282 135 9 chrX 150279457 150280102 -16370194 + L1M2 LINE L1 3899 4670 -2175 4 1731 2497 240 104 12 chrX 150280514 150281160 -16369136 + RMER1C Other Other 622 1326 -16 4 1731 533 258 39 9 chrX 150281545 150281711 -16368585 - B3A SINE B2 -18 177 2 4 1731 489 271 7 19 chrX 150281726 150281880 -16368416 - Lx8 LINE L1 -543 6930 6779 4 1731 5701 107 46 20 chrX 150282014 150282901 -16367395 - Lx LINE L1 0 6654 5745 4 1731 6636 125 27 3 chrX 150282901 150284593 -16365703 + L1_Mus4 LINE L1 4903 6634 -2 4 1731 11964 92 23 8 chrX 150284609 150286463 -16363833 + MusHAL1 LINE L1 206 2086 -626 4 1731 9746 163 32 8 chrX 150286534 150289313 -16360983 + Lx3C LINE L1 4147 6974 -2 4 1731 274 323 119 55 chrX 150289344 150289751 -16360545 + L1MB4 LINE L1 4410 4833 -1307 4 1731 754 234 84 50 chrX 150289751 150289953 -16360343 - B3 SINE B2 -5 211 3 4 1731 338 204 62 1 chrX 150289953 150290056 -16360240 + L1MB4 LINE L1 4834 4959 -1187 4 1731 794 253 102 155 chrX 150290070 150290715 -16359581 + L1MB4 LINE L1 5569 6179 -1 4 1731 279 255 58 50 chrX 150290732 150290886 -16359410 + L1M4 LINE L1 3838 3999 -2147 4 1731 504 255 74 31 chrX 150291055 150291217 -16359079 + MLT1A0 LTR MaLR 25 193 -172 4 1731 1544 266 34 30 chrX 150291252 150291689 -16358607 + Lx6 LINE L1 6994 7432 -28 4 1731 261 297 21 32 chrX 150291746 150291840 -16358456 + MLT1A0 LTR MaLR 271 363 -11 4 1731 562 362 19 19 chrX 150292009 150292223 -16358073 - MER21B LTR ERV1 -86 777 564 4 1731 771 185 59 0 chrX 150292240 150292375 -16357921 - B1_Mus1 SINE Alu 0 148 6 4 1731 1116 345 102 27 chrX 150292372 150292860 -16357436 - MER21B LTR ERV1 -276 587 63 4 1731 2320 119 5 21 chrX 150292938 150293316 -16356980 + L1_Mus3 LINE L1 6265 6636 -2 4 1731 317 351 30 50 chrX 150293361 150293562 -16356734 + L1M4 LINE L1 4571 4767 -1379 4 1731 276 111 0 0 chrX 150293565 150293610 -16356686 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 4 1731 542 303 22 22 chrX 150293613 150293839 -16356457 + L1M4 LINE L1 4782 5007 -1139 4 1731 240 254 25 59 chrX 150294056 150294181 -16356115 + L1M4 LINE L1 5045 5177 -969 4 1731 4481 75 37 2 chrX 150294490 150295090 -16355206 - L1_Mus2 LINE L1 0 6566 5946 4 1731 309 269 15 0 chrX 150295124 150295191 -16355105 - RMER15 LTR ERVL -14 561 494 4 1731 245 268 36 12 chrX 150295234 150295317 -16354979 - Lx8 LINE L1 -342 7131 7047 4 1731 1047 269 105 3 chrX 150295412 150295718 -16354578 - RMER15-int LTR ERVL -236 4763 4427 4 1731 470 208 21 10 chrX 150295720 150295817 -16354479 + ORR1E LTR MaLR 1 98 -261 4 1731 22 0 0 0 chrX 150295817 150295839 -16354457 + AT_rich Low_complexity Low_complexity 1 22 0 4 1731 396 117 0 0 chrX 150295844 150295921 -16354375 + (TCTG)n Simple_repeat Simple_repeat 2 78 0 4 1731 666 297 36 18 chrX 150295922 150296090 -16354206 - B3A SINE B2 -26 172 2 4 1731 544 155 0 0 chrX 150296115 150296199 -16354097 - Lx5 LINE L1 -488 6562 6479 4 1731 962 145 46 11 chrX 150296198 150296372 -16353924 - Lx5 LINE L1 -1174 5876 5697 4 1731 1830 195 74 21 chrX 150296370 150296748 -16353548 + Lx5 LINE L1 6584 6981 -69 4 1731 1003 251 22 82 chrX 150296764 150297061 -16353235 + ORR1E LTR MaLR 76 359 0 4 1731 681 261 98 14 chrX 150297071 150297285 -16353011 - RMER15-int LTR ERVL -587 4412 4181 4 1731 246 176 0 0 chrX 150297342 150297393 -16352903 + T-rich Low_complexity Low_complexity 1 51 0 4 1731 373 155 0 0 chrX 150297393 150297451 -16352845 - B1_Mus1 SINE Alu -88 60 3 4 1731 523 302 291 18 chrX 150298136 150298429 -16351867 - RMER15-int LTR ERVL -2603 2396 2024 4 1731 1095 311 33 23 chrX 150299065 150299460 -16350836 - RMER15-int LTR ERVL -3385 1614 1216 4 1731 1024 336 56 30 chrX 150299493 150300041 -16350255 - RMER15-int LTR ERVL -4247 752 250 4 1731 477 0 0 0 chrX 150300494 150300547 -16349749 + (TCTA)n Simple_repeat Simple_repeat 1 53 0 4 1731 317 350 43 7 chrX 150300867 150301005 -16349291 + B1F2 SINE Alu 1 143 -6 4 1731 363 44 0 0 chrX 150301097 150301142 -16349154 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 4 1731 779 294 27 20 chrX 150301232 150301779 -16348517 + L1MA9 LINE L1 1954 2522 -4646 4 1731 244 250 21 93 chrX 150301861 150301958 -16348338 - RLTR14 LTR ERV1 -8 374 285 4 1731 410 280 56 56 chrX 150302332 150302563 -16347733 + L1MA9 LINE L1 2599 2829 -4339 4 1731 1833 219 9 49 chrX 150302589 150303020 -16347276 + MTD LTR MaLR 3 416 -3 4 1731 784 272 97 63 chrX 150303581 150304144 -16346152 + L1MA9 LINE L1 4699 5334 -1830 4 1731 1489 215 19 25 chrX 150304178 150304498 -16345798 - Lx5 LINE L1 -251 6799 6482 4 1731 995 283 13 0 chrX 150304496 150304722 -16345574 + Lx5 LINE L1 6818 7046 -4 4 1731 202 177 65 0 chrX 150304761 150304823 -16345473 + (TTAAA)n Simple_repeat Simple_repeat 4 69 0 4 1731 215 283 83 0 chrX 150304870 150304930 -16345366 + ID4_ SINE ID 9 73 -10 4 1731 666 271 106 110 chrX 150304947 150305648 -16344648 + L1MA9 LINE L1 5434 6131 -1033 4 1731 369 0 0 0 chrX 150305790 150305831 -16344465 + (TAAAA)n Simple_repeat Simple_repeat 3 43 0 4 1731 338 282 44 11 chrX 150305841 150306024 -16344272 + L1MA9 LINE L1 6136 6324 -837 4 1731 731 289 36 15 chrX 150306042 150306379 -16343917 + L1M1 LINE L1 5296 5639 -661 4 1731 1049 226 90 95 chrX 150306403 150306814 -16343482 - MT2A LTR ERVL -62 413 1 4 1731 569 268 15 31 chrX 150306814 150307010 -16343286 + L1MA9 LINE L1 6661 6853 -480 4 1731 11685 101 3 9 chrX 150307009 150307270 -16343026 + L1_Mus1 LINE L1 3943 4204 -2363 4 1731 376 273 39 23 chrX 150307270 150307402 -16342894 + MT2B2 LTR ERVL 307 504 -80 4 1731 11685 101 3 9 chrX 150307402 150309753 -16340543 + L1_Mus1 LINE L1 4205 6566 -1 4 1731 390 282 16 0 chrX 150309758 150309882 -16340414 + L1MA5A LINE L1 5814 5939 -358 4 1731 640 255 23 126 chrX 150309883 150310098 -16340198 + B3A SINE B2 19 211 -5 5 1731 21 57 0 0 chrX 150310101 150310136 -16340160 + AT_rich Low_complexity Low_complexity 1 35 0 5 1731 214 100 100 0 chrX 150311112 150311152 -16339144 + (TCTG)n Simple_repeat Simple_repeat 1 44 0 5 1731 965 65 7 0 chrX 150311153 150311291 -16339005 + (TC)n Simple_repeat Simple_repeat 1 139 0 5 1731 232 108 27 0 chrX 150311509 150311546 -16338750 - B3 SINE B2 -178 38 1 5 1731 399 299 188 31 chrX 150311740 150311964 -16338332 - RMER5 LTR ERV1 -234 300 42 5 1731 761 250 106 12 chrX 150312171 150312351 -16337945 + L1M2 LINE L1 4777 4982 -1161 5 1731 477 0 0 0 chrX 150312351 150312404 -16337892 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1731 761 250 106 12 chrX 150312404 150312478 -16337818 + L1M2 LINE L1 4983 5055 -1088 5 1731 1095 265 83 14 chrX 150312762 150313038 -16337258 + MTE2a LTR MaLR 85 379 0 5 1731 340 299 217 9 chrX 150313255 150313481 -16336815 + B4 SINE B4 2 274 -18 5 1731 239 170 0 21 chrX 150313949 150313997 -16336299 - Lx6 LINE L1 -17 7443 7397 5 1731 192 303 26 13 chrX 150314158 150314235 -16336061 + MIRb SINE MIR 83 160 -108 5 1731 6534 102 2 0 chrX 150314278 150315818 -16334478 + L1Md_F LINE L1 301 1843 -4040 5 1731 3598 44 0 0 chrX 150315816 150316252 -16334044 + L1Md_F2 LINE L1 5757 6192 -390 5 1731 1138 23 0 0 chrX 150316249 150316378 -16333918 + L1Md_F2 LINE L1 5458 5586 -297 5 1731 7975 55 1 2 chrX 150316378 150317375 -16332921 + L1Md_F2 LINE L1 5587 6582 0 5 1731 604 222 14 7 chrX 150317375 150317392 -16332904 + L1M4 LINE L1 5616 5634 -540 5 1731 459 0 0 0 chrX 150317777 150317828 -16332468 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 5 1731 5846 165 22 25 chrX 150317828 150319001 -16331295 + L1_Rod LINE L1 1259 2428 -3419 5 1731 320 135 92 46 chrX 150319062 150319081 -16331215 + Lx9 LINE L1 7520 7535 -109 5 1731 2680 132 256 13 chrX 150319081 150319207 -16331089 + RMER6C LTR ERVK 1 129 -561 5 1731 279 54 0 0 chrX 150319207 150319244 -16331052 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1731 2680 132 256 13 chrX 150319244 150319379 -16330917 + RMER6C LTR ERVK 130 308 -382 5 1731 760 20 20 0 chrX 150319379 150319477 -16330819 + (GA)n Simple_repeat Simple_repeat 2 101 0 5 1731 2680 132 256 13 chrX 150319477 150319768 -16330528 + RMER6C LTR ERVK 309 688 -2 5 1731 320 135 92 46 chrX 150319768 150319857 -16330439 + Lx9 LINE L1 7536 7633 -11 5 1731 35 0 0 0 chrX 150319861 150319896 -16330400 + AT_rich Low_complexity Low_complexity 1 35 0 5 1731 893 137 229 0 chrX 150320472 150320655 -16329641 - URR1A DNA MER1_type -1 225 1 5 1731 260 263 160 26 chrX 150321031 150321144 -16329152 - MIR SINE MIR -105 171 39 5 1731 191 408 37 37 chrX 150321307 150321442 -16328854 - L2b LINE L2 0 3375 3241 5 1731 483 0 45 0 chrX 150321465 150321532 -16328764 + (CAAAA)n Simple_repeat Simple_repeat 2 71 0 5 1731 227 277 205 0 chrX 150321990 150322073 -16328223 - LTR16A LTR ERVL -112 339 240 5 1731 201 287 183 0 chrX 150322244 150322359 -16327937 - L2b LINE L2 -562 2857 2722 5 1731 252 184 0 0 chrX 150325080 150325129 -16325167 + CT-rich Low_complexity Low_complexity 4 52 0 5 1731 612 40 0 0 chrX 150325595 150325670 -16324626 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 5 1731 771 76 33 33 chrX 150325670 150325781 -16324515 - B1_Mus1 SINE Alu -11 137 27 5 1731 225 0 0 0 chrX 150325792 150325817 -16324479 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1731 31 58 0 0 chrX 150326213 150326265 -16324031 + AT_rich Low_complexity Low_complexity 1 52 0 5 1731 241 154 39 0 chrX 150326265 150326317 -16323979 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 5 1731 967 120 0 7 chrX 150326317 150326468 -16323828 - B2_Mm2 SINE B2 0 195 46 5 1731 312 70 0 0 chrX 150326586 150326629 -16323667 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1731 259 276 65 13 chrX 150326637 150326714 -16323582 - ID SINE ID -143 81 1 5 1731 1058 101 191 5 chrX 150326741 150326930 -16323366 + URR1A DNA MER1_type 2 225 -1 5 1731 372 176 0 0 chrX 150326984 150327086 -16323210 + (TA)n Simple_repeat Simple_repeat 2 103 0 5 1731 259 299 116 20 chrX 150327101 150327248 -16323048 - MIR3 SINE MIR -15 193 33 5 1731 1195 122 16 6 chrX 150327359 150327541 -16322755 - B2_Mm2 SINE B2 -10 185 2 5 1731 360 0 0 0 chrX 150329173 150329213 -16321083 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 1731 348 143 0 0 chrX 150329213 150329285 -16321011 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 1731 203 45 21 62 chrX 150329432 150329480 -16320816 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 5 1731 201 171 0 0 chrX 150331052 150331087 -16319209 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 5 1731 878 157 0 0 chrX 150331087 150331221 -16319075 - B1_Mus1 SINE Alu -13 135 2 5 1731 396 184 0 0 chrX 150332214 150332312 -16317984 + (TA)n Simple_repeat Simple_repeat 2 99 0 5 1731 195 42 0 0 chrX 150332423 150332447 -16317849 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1731 215 298 0 0 chrX 150332730 150332777 -16317519 + B1_Mus2 SINE Alu 2 48 -99 5 1731 24 0 0 0 chrX 150334103 150334127 -16316169 + AT_rich Low_complexity Low_complexity 1 24 0 5 1731 5639 169 212 11 chrX 150334554 150334796 -16315500 + L1_Mur3 LINE L1 1322 1670 -4210 5 1731 414 0 0 0 chrX 150334796 150334842 -16315454 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 1731 3382 21 18 0 chrX 150334845 150335229 -16315067 - L1Md_F2 LINE L1 -14 6568 6178 5 1731 5639 169 212 11 chrX 150335229 150336378 -16313918 + L1_Mur3 LINE L1 1671 2992 -2888 5 1731 6435 93 5 56 chrX 150336387 150337453 -16312843 + L1VL1 LINE L1 194 1204 -2494 5 216 22838 99 3 1 chrX 150337454 150341333 -16308963 + L1_Mus1 LINE L1 2681 6567 0 5 1732 6151 150 95 10 chrX 150341338 150342113 -16308183 + L1_Mur3 LINE L1 2994 3845 -2035 5 1732 204 40 0 0 chrX 150342113 150342138 -16308158 + (CAA)n Simple_repeat Simple_repeat 2 26 0 5 1732 6151 150 95 10 chrX 150342138 150342332 -16307964 + L1_Mur3 LINE L1 3846 4066 -1814 5 1732 1020 61 0 0 chrX 150342332 150342464 -16307832 + (TC)n Simple_repeat Simple_repeat 1 132 0 5 1732 6151 176 78 12 chrX 150342464 150342983 -16307313 + L1_Mur3 LINE L1 4067 4340 -1540 5 1732 1928 135 51 0 chrX 150343375 150343686 -16306610 + ORR1A2 LTR MaLR 1 327 0 5 1732 6378 171 20 102 chrX 150343686 150345162 -16305134 + ORR1A2-int LTR MaLR 1 1325 -467 5 1732 3098 41 0 0 chrX 150345209 150345577 -16304719 + L1_Mus1 LINE L1 6200 6567 0 5 1732 7252 121 11 9 chrX 150345675 150347212 -16303084 - L1_Mus3 LINE L1 -1 6637 5100 5 1732 12207 109 10 8 chrX 150347215 150347234 -16303062 - MusHAL1 LINE L1 -319 2393 2379 5 1732 4580 65 2 0 chrX 150347234 150347804 -16302492 - L1_Mus1 LINE L1 0 6567 5997 5 1732 12207 109 10 8 chrX 150347804 150349658 -16300638 - MusHAL1 LINE L1 -334 2378 516 5 1732 585 96 12 0 chrX 150349658 150349741 -16300555 - U6 snRNA snRNA 0 107 24 5 1732 2854 97 99 8 chrX 150349937 150350447 -16299849 + ORR1A2-int LTR MaLR 1245 1963 0 5 1732 2035 146 12 0 chrX 150350447 150350768 -16299528 + ORR1A2 LTR MaLR 1 325 -2 5 1732 647 220 117 85 chrX 150351084 150351545 -16298751 + L1M2 LINE L1 2987 3462 -2681 5 1732 358 248 37 65 chrX 150351608 150351716 -16298580 - ORR1E LTR MaLR -252 107 3 5 1732 1581 203 150 8 chrX 150351806 150352173 -16298123 - MTC LTR MaLR -2 419 1 5 1732 4597 182 24 25 chrX 150352173 150353046 -16297250 - MTC-int LTR MaLR 0 1258 387 5 1732 1068 308 74 41 chrX 150353054 150354083 -16296213 - L1_Rod LINE L1 -3557 2329 1248 5 1732 1224 174 33 158 chrX 150354094 150354429 -16295867 + RLTR24 LTR ERV1 1 293 -236 5 1732 27 73 0 0 chrX 150354896 150354951 -16295345 + AT_rich Low_complexity Low_complexity 1 55 0 5 1732 186 71 0 0 chrX 150355462 150355490 -16294806 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 5 1732 780 148 41 0 chrX 150355518 150355640 -16294656 - B2_Mm2 SINE B2 -66 129 3 5 1732 432 163 11 34 chrX 150355847 150355936 -16294360 + RMER5 LTR ERV1 37 123 -411 5 1732 1757 88 101 22 chrX 150355938 150356277 -16294019 - RLTR10A LTR ERVK -3 382 1 5 1732 766 271 56 20 chrX 150356277 150356519 -16293777 + RMER5 LTR ERV1 117 367 -167 5 1732 631 192 102 16 chrX 150356507 150356634 -16293662 - B1_Mur2 SINE Alu -1 148 11 5 1732 246 310 40 40 chrX 150356568 150356642 -16293654 - MT2B LTR ERVL -361 240 167 5 1732 496 289 83 16 chrX 150356673 150356866 -16293430 + RMER5 LTR ERV1 329 534 0 5 1732 228 135 0 0 chrX 150356917 150356954 -16293342 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 1732 245 51 26 0 chrX 150357605 150357644 -16292652 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 5 1732 396 101 22 0 chrX 150358111 150358200 -16292096 + Lx4A LINE L1 6966 7056 -2 5 1732 573 115 0 0 chrX 150358231 150358318 -16291978 + (TTCC)n Simple_repeat Simple_repeat 2 88 0 5 1732 2361 47 36 10 chrX 150358828 150359130 -16291166 - L1Md_F2 LINE L1 -550 6032 5723 5 1732 2093 64 15 0 chrX 150359135 150359399 -16290897 + L1_Mus1 LINE L1 6300 6567 0 5 1732 4564 84 2 3 chrX 150359421 150360018 -16290278 + L1_Mus2 LINE L1 5970 6565 -1 5 1732 434 169 0 11 chrX 150360035 150360125 -16290171 + GA-rich Low_complexity Low_complexity 2 90 0 5 1732 237 298 59 78 chrX 150360138 150360240 -16290056 + B3A SINE B2 65 164 -52 5 1732 402 21 0 0 chrX 150360243 150360290 -16290006 + (TATG)n Simple_repeat Simple_repeat 1 47 0 5 1732 269 277 37 73 chrX 150360420 150360529 -16289767 + RLTR19C LTR ERVK 21 125 -381 5 1732 235 307 55 33 chrX 150364938 150365029 -16285267 - MER45C DNA Tip100 -603 350 258 5 1732 10212 107 11 8 chrX 150368861 150370521 -16279775 - Lx4A LINE L1 0 7058 5386 5 1732 405 0 0 0 chrX 150370624 150370669 -16279627 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 1732 192 185 88 53 chrX 150372038 150372095 -16278201 - L2 LINE L2 -3328 91 33 5 1732 1315 277 82 33 chrX 150372960 150373445 -16276851 + RLTR20B3 LTR ERVK 13 521 -56 5 1732 456 305 103 47 chrX 150374555 150374768 -16275528 + RLTR26 LTR ERVK 193 417 -225 5 1732 3146 36 7 47 chrX 150376132 150376538 -16273758 - RLTR10 LTR ERVK 0 390 1 5 1732 8614 14 0 0 chrX 150376540 150377476 -16272820 - RLTR10-int LTR ERVK -3 1984 1049 5 1732 2845 35 5 14 chrX 150377474 150377823 -16272473 - RLTR10-int LTR ERVK -1612 375 1 5 1732 2998 34 7 116 chrX 150377823 150378261 -16272035 - RLTR10 LTR ERVK 0 390 1 5 1732 279 0 0 0 chrX 150378933 150378964 -16271332 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1732 531 56 0 0 chrX 150379657 150379728 -16270568 + (TG)n Simple_repeat Simple_repeat 1 71 0 5 1732 2485 77 55 23 chrX 150394666 150395014 -16255282 + RLTR10D LTR ERVK 1 359 0 5 1732 49294 63 20 13 chrX 150395014 150400354 -16249942 + IAP-d-int LTR ERVK 1 5396 -1146 5 1732 570 25 12 0 chrX 150400354 150400435 -16249861 - L1Md_F3 LINE L1 -1 6583 6502 5 1732 49294 63 20 13 chrX 150400435 150401363 -16248933 + IAP-d-int LTR ERVK 5397 6313 -229 5 1732 2886 94 5 17 chrX 150405176 150405587 -16244709 + MTB_Mm LTR MaLR 1 406 -1 5 1732 4339 103 130 72 chrX 150417467 150418305 -16231991 - RMER17D LTR ERVK -2 887 1 5 1732 28302 125 11 5 chrX 150421196 150426580 -16223716 - L1_Mus1 LINE L1 -1 6566 1152 5 1732 441 36 0 0 chrX 150427258 150427313 -16222983 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1732 479 321 113 45 chrX 150428703 150429340 -16220956 - Lx7 LINE L1 -856 6840 6161 6 1732 38265 42 2 1 chrX 150429337 150435297 -16214999 - L1Md_T LINE L1 0 6585 524 6 1732 577 344 96 25 chrX 150435282 150435888 -16214408 - Lx7 LINE L1 -938 6758 6110 6 1732 34005 73 12 18 chrX 150437407 150442494 -16207802 + L1Md_F2 LINE L1 528 5586 -297 6 1732 8073 55 3 1 chrX 150442494 150443487 -16206809 + L1Md_F2 LINE L1 5587 6581 -1 6 1732 507 245 63 84 chrX 150444358 150444487 -16205809 - Lx9 LINE L1 -1 7643 7517 6 1732 5114 57 9 1 chrX 150444487 150445154 -16205142 + L1Md_F3 LINE L1 5901 6572 -12 6 1732 507 245 63 84 chrX 150445154 150445309 -16204987 - Lx9 LINE L1 -128 7516 7365 6 1732 308 133 0 0 chrX 150445313 150445358 -16204938 - ORR1B1 LTR MaLR -8 386 342 6 1732 957 136 0 0 chrX 150445358 150445513 -16204783 - L1_Mus1 LINE L1 -1 6566 6412 6 1732 292 228 50 12 chrX 150445513 150445547 -16204749 - ORR1B1 LTR MaLR -53 325 290 6 1732 3910 159 57 15 chrX 150446330 150447107 -16203189 + RMER17D2 LTR ERVK 1 809 0 6 1732 741 324 50 7 chrX 150447701 150448002 -16202294 - Lx7 LINE L1 -708 6988 6675 6 1732 690 13 0 0 chrX 150448243 150448322 -16201974 + (GA)n Simple_repeat Simple_repeat 2 80 0 6 1732 368 181 147 30 chrX 150448400 150448544 -16201752 + L1_Mur3 LINE L1 2071 2242 -3638 6 1732 26602 125 11 13 chrX 150448625 150450644 -16199652 - L1_Mus1 LINE L1 0 6567 4615 6 1732 1087 97 0 0 chrX 150450644 150450788 -16199508 - B1_Mus1 SINE Alu 0 148 5 6 1732 26602 142 6 23 chrX 150450788 150454265 -16196031 - L1_Mus1 LINE L1 -1269 4614 1075 6 1732 423 0 0 0 chrX 150454935 150454982 -16195314 + (TC)n Simple_repeat Simple_repeat 1 47 0 6 1732 342 0 0 0 chrX 150454982 150455019 -16195277 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1732 185 232 54 0 chrX 150455452 150455508 -16194788 + L4 LINE RTE 652 710 -1319 6 1732 698 343 89 26 chrX 150456414 150457078 -16193218 - Lx7 LINE L1 -881 6815 6110 6 1732 33335 73 12 17 chrX 150458597 150463679 -16186617 + L1Md_F2 LINE L1 528 5586 -297 6 1732 7964 52 2 0 chrX 150463679 150464661 -16185635 + L1Md_F2 LINE L1 5587 6570 -12 6 1732 507 245 63 84 chrX 150465543 150465672 -16184624 - Lx9 LINE L1 -1 7643 7517 6 1732 5115 61 6 1 chrX 150465672 150466341 -16183955 + L1Md_F3 LINE L1 5901 6572 -12 6 1732 507 245 63 84 chrX 150466341 150466496 -16183800 - Lx9 LINE L1 -128 7516 7365 6 1732 308 133 0 0 chrX 150466500 150466545 -16183751 - ORR1B1 LTR MaLR -8 386 342 6 1732 957 136 0 0 chrX 150466545 150466700 -16183596 - L1_Mus1 LINE L1 -1 6566 6412 6 1732 292 228 50 12 chrX 150466700 150466734 -16183562 - ORR1B1 LTR MaLR -53 325 290 6 1732 3925 158 57 15 chrX 150467517 150468294 -16182002 + RMER17D2 LTR ERVK 1 809 0 6 1732 741 324 50 7 chrX 150468888 150469189 -16181107 - Lx7 LINE L1 -708 6988 6675 6 1732 594 0 0 0 chrX 150469452 150469518 -16180778 + (GA)n Simple_repeat Simple_repeat 1 66 0 6 1732 334 216 133 21 chrX 150469576 150469740 -16180556 + L1_Mur2 LINE L1 2051 2242 -3638 6 216 27102 122 16 4 chrX 150469821 150471751 -16178545 - L1_Mus1 LINE L1 0 6567 4615 6 1733 876 89 0 0 chrX 150471751 150471874 -16178422 + (TTTC)n Simple_repeat Simple_repeat 3 125 0 6 1733 1036 83 0 0 chrX 150471874 150472006 -16178290 - B1_Mus1 SINE Alu -12 136 5 6 1733 27102 140 16 7 chrX 150472006 150473116 -16177180 - L1_Mus1 LINE L1 -1269 4614 3492 6 1733 214 50 50 0 chrX 150473116 150473156 -16177140 + (TTG)n Simple_repeat Simple_repeat 2 43 0 6 1733 27102 136 14 7 chrX 150473156 150475483 -16174813 - L1_Mus1 LINE L1 -2392 3491 1075 6 1733 405 0 0 0 chrX 150476153 150476198 -16174098 + (TC)n Simple_repeat Simple_repeat 1 45 0 6 1733 252 0 0 0 chrX 150476198 150476225 -16174071 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 1733 185 232 54 0 chrX 150476658 150476714 -16173582 + L4 LINE RTE 652 710 -1319 6 1733 689 343 89 26 chrX 150477620 150478284 -16172012 - Lx7 LINE L1 -881 6815 6110 6 1733 33286 73 12 18 chrX 150479803 150484891 -16165405 + L1Md_F2 LINE L1 528 5586 -297 6 1733 7964 52 2 0 chrX 150484891 150485873 -16164423 + L1Md_F2 LINE L1 5587 6570 -12 6 1733 507 245 63 84 chrX 150486755 150486884 -16163412 - Lx9 LINE L1 -1 7643 7517 6 1733 5115 61 6 1 chrX 150486884 150487553 -16162743 + L1Md_F3 LINE L1 5901 6572 -12 6 1733 507 245 63 84 chrX 150487553 150487708 -16162588 - Lx9 LINE L1 -128 7516 7365 6 1733 308 133 0 0 chrX 150487712 150487757 -16162539 - ORR1B1 LTR MaLR -8 386 342 6 1733 957 136 0 0 chrX 150487757 150487912 -16162384 - L1_Mus1 LINE L1 -1 6566 6412 6 1733 292 228 50 12 chrX 150487912 150487946 -16162350 - ORR1B1 LTR MaLR -53 325 290 6 1733 3925 158 57 15 chrX 150488729 150489506 -16160790 + RMER17D2 LTR ERVK 1 809 0 6 1733 741 324 50 7 chrX 150490100 150490401 -16159895 - Lx7 LINE L1 -708 6988 6675 6 1733 594 0 0 0 chrX 150490664 150490730 -16159566 + (GA)n Simple_repeat Simple_repeat 1 66 0 6 1733 334 216 133 21 chrX 150490788 150490952 -16159344 + L1_Mur2 LINE L1 2051 2242 -3638 6 1733 27102 122 16 4 chrX 150491033 150492963 -16157333 - L1_Mus1 LINE L1 0 6567 4615 6 1733 876 89 0 0 chrX 150492963 150493086 -16157210 + (TTTC)n Simple_repeat Simple_repeat 3 125 0 6 1733 1036 83 0 0 chrX 150493086 150493218 -16157078 - B1_Mus1 SINE Alu -12 136 5 6 1733 27102 140 16 7 chrX 150493218 150494328 -16155968 - L1_Mus1 LINE L1 -1269 4614 3492 6 1733 214 50 50 0 chrX 150494328 150494368 -16155928 + (TTG)n Simple_repeat Simple_repeat 2 43 0 6 1733 27102 136 14 7 chrX 150494368 150496695 -16153601 - L1_Mus1 LINE L1 -2392 3491 1075 6 1733 315 0 0 0 chrX 150497365 150497400 -16152896 + (TC)n Simple_repeat Simple_repeat 1 35 0 6 1733 306 0 0 0 chrX 150497400 150497433 -16152863 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1733 185 232 54 0 chrX 150497866 150497922 -16152374 + L4 LINE RTE 652 710 -1319 6 1733 719 341 89 26 chrX 150498827 150499491 -16150805 - Lx7 LINE L1 -881 6815 6110 6 1733 327 254 106 25 chrX 150501940 150502042 -16148254 - Lx9 LINE L1 -47 7597 7482 1 1733 225 0 0 0 chrX 150502042 150502067 -16148229 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1733 327 254 106 25 chrX 150502067 150502162 -16148134 - Lx9 LINE L1 -163 7481 7384 1 1733 314 198 57 23 chrX 150502181 150502233 -16148063 - ORR1C1 LTR MaLR 0 378 324 3 1733 1040 97 7 0 chrX 150502233 150502387 -16147909 - L1_Mus1 LINE L1 0 6567 6413 4 1733 314 198 57 23 chrX 150502387 150502422 -16147874 - ORR1C1 LTR MaLR -55 323 289 3 1733 3819 172 56 10 chrX 150503210 150503984 -16146312 + RMER17D2 LTR ERVK 1 809 0 5 1733 264 339 9 0 chrX 150504422 150504534 -16145762 - Lx7 LINE L1 -421 7275 7163 6 1733 622 329 38 7 chrX 150504598 150504889 -16145407 - Lx7 LINE L1 -722 6974 6675 6 1733 667 50 20 0 chrX 150505152 150505252 -16145044 + (GA)n Simple_repeat Simple_repeat 1 102 0 7 1733 340 192 149 8 chrX 150505332 150505453 -16144843 + L1_Mur2 LINE L1 2072 2209 -3668 8 1733 6225 101 20 8 chrX 150505488 150506257 -16144039 - L1_Mus1 LINE L1 0 6567 5849 9 1733 3374 43 0 0 chrX 150506257 150506653 -16143643 - MTA_Mm LTR MaLR 0 396 1 1 1733 9207 19 19 0 chrX 150506653 150507730 -16142566 - MTA_Mm-int LTR MaLR 0 1098 1 1 1733 3279 48 0 0 chrX 150507730 150508126 -16142170 - MTA_Mm LTR MaLR 0 396 1 1 1733 6225 133 11 10 chrX 150508126 150508765 -16141531 - L1_Mus1 LINE L1 -719 5848 5209 9 1733 12128 141 18 5 chrX 150508763 150511082 -16139214 - L1VL1 LINE L1 -2406 3477 1122 1 1733 279 0 0 0 chrX 150511736 150511767 -16138529 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 1733 360 43 0 0 chrX 150511767 150511812 -16138484 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1733 568 330 98 28 chrX 150513180 150513863 -16136433 - Lx7 LINE L1 -856 6840 6110 1 1733 25 0 0 0 chrX 150515187 150515212 -16135084 + AT_rich Low_complexity Low_complexity 1 25 0 1 1733 320 243 129 13 chrX 150516276 150516415 -16133881 - Lx9 LINE L1 -1 7643 7481 1 1733 369 0 0 0 chrX 150516415 150516456 -16133840 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1733 320 243 129 13 chrX 150516456 150516549 -16133747 - Lx9 LINE L1 -164 7480 7385 1 1733 314 198 57 23 chrX 150516568 150516620 -16133676 - ORR1C1 LTR MaLR 0 378 324 1 1733 1013 110 7 0 chrX 150516620 150516774 -16133522 - L1_Mus1 LINE L1 0 6567 6413 1 1733 314 223 62 68 chrX 150516774 150516858 -16133438 - ORR1C1 LTR MaLR -55 323 193 1 1733 3708 167 74 11 chrX 150517593 150518354 -16131942 + RMER17D2 LTR ERVK 1 809 0 2 1733 21 36 0 0 chrX 150518540 150518568 -16131728 + AT_rich Low_complexity Low_complexity 1 28 0 2 1733 619 330 46 41 chrX 150518971 150519385 -16130911 - Lx7 LINE L1 -722 6974 6559 2 1733 194 150 0 24 chrX 150519520 150519561 -16130735 + GA-rich Low_complexity Low_complexity 2 41 0 2 1733 2779 54 0 0 chrX 150519816 150520148 -16130148 - IAPEY3_LTR LTR ERVK 0 332 1 2 1733 11226 74 13 12 chrX 150520148 150521888 -16128408 - IAPEY3-int LTR ERVK 0 7581 5887 2 1733 3506 47 28 0 chrX 150521889 150522313 -16127983 - RLTR10C LTR ERVK 0 436 1 2 1733 41039 29 1 15 chrX 150522313 150527414 -16122882 - MMERVK10C-int LTR ERVK 0 7581 2552 2 1733 382 117 6 58 chrX 150527420 150527548 -16122748 - MMERVK10C-int LTR ERVK -5634 1947 1721 2 1733 722 206 230 47 chrX 150527548 150527936 -16122360 - MMERVK10C-int LTR ERVK -4795 611 291 2 1733 810 157 4 146 chrX 150528008 150528262 -16122034 - MMERVK10C-int LTR ERVK -6629 952 735 2 1733 2548 81 0 0 chrX 150528263 150528610 -16121686 - MMERVK10C-int LTR ERVK -7234 347 1 2 1733 3586 31 28 5 chrX 150528610 150529036 -16121260 - RLTR10C LTR ERVK 0 436 1 2 1733 41678 70 8 5 chrX 150529041 150534683 -16115613 - IAPEY3-int LTR ERVK -2019 5661 1 2 1733 2710 58 15 0 chrX 150534683 150535010 -16115286 - IAPEY3_LTR LTR ERVK 0 332 1 2 1733 22266 131 44 8 chrX 150535057 150537269 -16113027 - L1_Mus1 LINE L1 0 6567 4339 2 1733 216 0 0 0 chrX 150537269 150537293 -16113003 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2 1733 22266 150 65 13 chrX 150537293 150537307 -16112989 - L1_Mus1 LINE L1 -1545 4338 4332 2 1733 5889 46 1 0 chrX 150537307 150538027 -16112269 - L1Md_A LINE L1 0 6582 5862 3 1733 22266 150 65 13 chrX 150538027 150538947 -16111349 - L1_Mus1 LINE L1 -1552 4331 3443 2 1733 1178 68 6 0 chrX 150538947 150539108 -16111188 + (TTTC)n Simple_repeat Simple_repeat 2 163 0 3 1733 22266 147 59 12 chrX 150539108 150541123 -16109173 - L1_Mus1 LINE L1 -2441 3442 1156 2 1733 405 0 0 0 chrX 150541803 150541848 -16108448 + (TC)n Simple_repeat Simple_repeat 1 45 0 3 1733 216 0 0 0 chrX 150541848 150541871 -16108425 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1733 185 232 54 0 chrX 150542304 150542360 -16107936 + L4 LINE RTE 652 710 -1319 3 1733 513 343 89 26 chrX 150543267 150543931 -16106365 - Lx7 LINE L1 -881 6815 6110 3 1733 31732 73 12 17 chrX 150545450 150550535 -16099761 + L1Md_F2 LINE L1 528 5586 -297 3 1733 7951 52 3 1 chrX 150550535 150551517 -16098779 + L1Md_F2 LINE L1 5587 6570 -12 3 1733 441 245 63 84 chrX 150552404 150552533 -16097763 - Lx9 LINE L1 -1 7643 7517 3 1733 5096 60 9 1 chrX 150552533 150553200 -16097096 + L1Md_F3 LINE L1 5901 6572 -12 3 1733 441 245 63 84 chrX 150553200 150553355 -16096941 - Lx9 LINE L1 -128 7516 7365 3 1733 309 133 0 0 chrX 150553359 150553404 -16096892 - ORR1B1 LTR MaLR -8 386 342 3 1733 958 136 0 0 chrX 150553404 150553559 -16096737 - L1_Mus1 LINE L1 -1 6566 6412 4 1733 292 228 50 12 chrX 150553559 150553593 -16096703 - ORR1B1 LTR MaLR -53 325 290 3 1733 3964 158 57 14 chrX 150554376 150555152 -16095144 + RMER17D2 LTR ERVK 1 809 0 4 1733 21 36 0 0 chrX 150555338 150555366 -16094930 + AT_rich Low_complexity Low_complexity 1 28 0 4 1733 652 329 38 7 chrX 150555759 150556050 -16094246 - Lx7 LINE L1 -722 6974 6675 4 1733 612 0 0 0 chrX 150556313 150556381 -16093915 + (GA)n Simple_repeat Simple_repeat 1 68 0 4 1733 321 177 181 10 chrX 150556479 150556585 -16093711 + L1_Mur3 LINE L1 2089 2222 -3658 4 1733 25554 125 11 4 chrX 150556684 150558630 -16091666 - L1_Mus1 LINE L1 0 6567 4615 4 1733 645 80 0 0 chrX 150558630 150558718 -16091578 + (TTTC)n Simple_repeat Simple_repeat 2 89 0 4 1733 1049 83 0 0 chrX 150558719 150558851 -16091445 - B1_Mus1 SINE Alu -12 136 5 4 1733 25554 143 5 8 chrX 150558851 150562323 -16087973 - L1_Mus1 LINE L1 -1269 4614 1075 4 1733 324 0 0 0 chrX 150562995 150563031 -16087265 + (TC)n Simple_repeat Simple_repeat 1 36 0 4 1733 324 0 0 0 chrX 150563031 150563066 -16087230 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1733 568 336 95 25 chrX 150564453 150565136 -16085160 - Lx7 LINE L1 -856 6840 6110 5 1733 24 53 0 0 chrX 150567495 150567533 -16082763 + AT_rich Low_complexity Low_complexity 1 38 0 5 1733 369 0 0 0 chrX 150567662 150567703 -16082593 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1733 359 255 28 0 chrX 150567707 150567813 -16082483 - Lx9 LINE L1 -171 7473 7365 5 1733 306 133 0 0 chrX 150567817 150567862 -16082434 - ORR1B1 LTR MaLR -8 386 342 5 1733 1549 42 0 11 chrX 150567862 150568053 -16082243 - B2_Mm1a SINE B2 -3 190 2 5 1733 935 136 0 0 chrX 150568072 150568219 -16082077 - L1_Mus1 LINE L1 -9 6558 6412 5 1733 3699 167 38 55 chrX 150569071 150569894 -16080402 + RMER17D2 LTR ERVK 1 809 0 5 1733 557 351 46 35 chrX 150570510 150570941 -16079355 - Lx7 LINE L1 -722 6974 6539 5 1733 1091 223 33 40 chrX 150571004 150571280 -16079016 + RLTR46 LTR ERVK 42 315 -5 6 1733 392 237 41 69 chrX 150571289 150571434 -16078862 + IAPEY3-int LTR ERVK 3 143 -7537 6 1733 21434 219 22 8 chrX 150571486 150576341 -16073955 + IAPEY3-int LTR ERVK 533 5457 -2223 6 1733 2946 156 3 86 chrX 150576582 150577221 -16073075 + MMERVK10C-int LTR ERVK 6849 7434 -147 6 1733 2384 71 3 0 chrX 150577223 150577534 -16072762 + RLTR10-int LTR ERVK 1486 1797 -190 6 1733 615 126 36 0 chrX 150577556 150577667 -16072629 + MMERVK10C-int LTR ERVK 7566 7680 0 6 1733 1290 176 33 40 chrX 150577676 150577948 -16072348 + RLTR46 LTR ERVK 42 311 -9 6 1733 576 0 0 0 chrX 150578029 150578093 -16072203 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 1733 325 189 170 0 chrX 150578188 150578294 -16072002 + L1_Mur2 LINE L1 2086 2209 -3668 6 1733 25142 124 11 11 chrX 150578390 150580381 -16069915 - L1_Mus1 LINE L1 0 6567 4615 6 1733 1142 76 0 0 chrX 150580381 150580525 -16069771 - B1_Mus1 SINE Alu 0 148 5 6 1733 25142 144 5 21 chrX 150580525 150584014 -16066282 - L1_Mus1 LINE L1 -1269 4614 1152 6 1733 858 29 0 0 chrX 150584690 150584795 -16065501 + (TC)n Simple_repeat Simple_repeat 1 105 0 6 1733 596 330 93 20 chrX 150586181 150586880 -16063416 - Lx7 LINE L1 -853 6843 6094 6 1733 458 241 77 28 chrX 150589284 150589532 -16060764 - Lx9 LINE L1 -1 7643 7384 7 1733 304 200 70 12 chrX 150589551 150589601 -16060695 - ORR1C1 LTR MaLR 0 378 324 7 1733 1003 116 0 0 chrX 150589601 150589756 -16060540 - L1_Mus1 LINE L1 0 6567 6413 7 1733 304 200 70 12 chrX 150589756 150589791 -16060505 - ORR1C1 LTR MaLR -55 323 289 7 1733 3928 168 52 10 chrX 150590577 150591354 -16058942 + RMER17D2 LTR ERVK 1 809 0 7 1733 559 337 60 49 chrX 150591970 150592401 -16057895 - Lx7 LINE L1 -722 6974 6539 7 1733 235 96 39 0 chrX 150592524 150592576 -16057720 + (GA)n Simple_repeat Simple_repeat 1 54 0 7 1733 322 186 166 0 chrX 150592652 150592780 -16057516 + L1_Mur2 LINE L1 2076 2222 -3658 7 1733 26061 102 20 8 chrX 150592867 150593575 -16056721 - L1_Mus1 LINE L1 0 6567 5849 7 1733 3314 43 0 2 chrX 150593575 150593972 -16056324 - MTA_Mm LTR MaLR 0 396 1 7 1733 9314 27 4 0 chrX 150593972 150595066 -16055230 - MTA_Mm-int LTR MaLR 0 1098 1 7 1733 3266 50 0 0 chrX 150595066 150595462 -16054834 - MTA_Mm LTR MaLR 0 396 1 7 1733 26061 142 6 12 chrX 150595462 150600282 -16050014 - L1_Mus1 LINE L1 -35 5848 1073 7 1733 2135 202 2 12 chrX 150600281 150600767 -16049529 - L1_Mus1 LINE L1 -5411 1205 725 7 1733 354 241 87 40 chrX 150600737 150600910 -16049386 - L1_Mus1 LINE L1 -5772 844 664 7 1733 342 272 16 38 chrX 150600961 150601163 -16049133 - L1VL1 LINE L1 -6030 392 78 7 216 2897 229 37 31 chrX 150601293 150602264 -16048032 - L1_Mur2 LINE L1 -1092 4785 3809 8 1734 7139 45 5 0 chrX 150603181 150604049 -16046247 + L1Md_F2 LINE L1 5710 6581 -1 8 1734 314 203 87 71 chrX 150604322 150604449 -16045847 - RLTR13D3 LTR ERVK -44 1070 942 8 1734 1068 84 0 0 chrX 150604574 150604717 -16045579 + B1_Mus1 SINE Alu 6 148 0 8 1734 33461 78 2 14 chrX 150605228 150611580 -16038716 - L1Md_F2 LINE L1 -12 6570 296 8 1734 23 68 0 0 chrX 150612097 150612141 -16038155 + AT_rich Low_complexity Low_complexity 1 44 0 8 1734 366 91 0 0 chrX 150612145 150612200 -16038096 + (TG)n Simple_repeat Simple_repeat 1 55 0 8 1734 22 0 0 0 chrX 150612350 150612372 -16037924 + AT_rich Low_complexity Low_complexity 1 22 0 8 1734 248 288 41 0 chrX 150612643 150612716 -16037580 + B2_Mm2 SINE B2 5 80 -115 8 1734 324 0 0 0 chrX 150612730 150612766 -16037530 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 1734 6182 117 25 3 chrX 150613241 150614219 -16036077 - Lx LINE L1 -3 6651 5653 9 1734 3571 221 66 64 chrX 150614660 150615560 -16034736 + RMER19B LTR ERVK 2 902 0 9 1734 237 288 40 27 chrX 150616561 150616636 -16033660 - Lx7 LINE L1 -1083 6613 6538 9 1734 24 0 0 0 chrX 150616732 150616756 -16033540 + AT_rich Low_complexity Low_complexity 1 24 0 9 1734 182 37 37 0 chrX 150616833 150616860 -16033436 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 9 1734 21 36 0 0 chrX 150617255 150617283 -16033013 + AT_rich Low_complexity Low_complexity 1 28 0 9 1734 1523 35 15 0 chrX 150618533 150618732 -16031564 + L1Md_F2 LINE L1 6378 6579 -3 9 1734 414 0 0 0 chrX 150618750 150618796 -16031500 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 1734 2507 62 3 20 chrX 150619210 150619556 -16030740 - L1Md_F2 LINE L1 0 6582 6243 9 1734 2499 39 3 0 chrX 150619556 150619868 -16030428 + L1Md_F2 LINE L1 5914 6226 -356 9 1734 275 378 0 0 chrX 150621606 150621733 -16028563 - Lx7 LINE L1 -423 7273 7147 9 1734 858 324 32 46 chrX 150621801 150622233 -16028063 - Lx7 LINE L1 -742 6954 6525 9 1734 5040 147 9 69 chrX 150622233 150623192 -16027104 - RLTR13D6 LTR ERVK 0 902 1 1 1734 858 324 32 46 chrX 150623192 150623258 -16027038 - Lx7 LINE L1 -1172 6524 6463 9 1734 844 331 39 7 chrX 150623301 150623709 -16026587 + Lx9 LINE L1 7020 7440 -204 1 1734 540 65 0 0 chrX 150623731 150623808 -16026488 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 1734 366 157 90 0 chrX 150623809 150623898 -16026398 + L1_Mur3 LINE L1 3922 4018 -1862 1 1734 297 296 41 0 chrX 150623889 150624058 -16026238 + L1_Mur2 LINE L1 1861 2036 -3841 1 1734 204 67 0 0 chrX 150624085 150624115 -16026181 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1734 272 229 152 0 chrX 150624191 150624309 -16025987 + L1_Mur2 LINE L1 2072 2207 -3670 1 1734 2977 233 17 33 chrX 150624314 150625200 -16025096 - L1_Mur2 LINE L1 -1070 4807 3936 1 1734 1606 230 27 12 chrX 150625200 150625614 -16024682 - BGLII_B LTR ERVK 0 441 22 1 1734 1323 237 23 9 chrX 150625634 150626064 -16024232 - MYSERV16_I-int LTR ERVK 0 2326 1891 1 1734 6719 113 7 0 chrX 150626078 150627849 -16022447 - L1_Mus1 LINE L1 -6 6561 4777 1 1734 9182 84 0 5 chrX 150627856 150629202 -16021094 + L1_Mm LINE L1 1927 3266 -2617 1 1734 7676 85 6 7 chrX 150629193 150629254 -16021042 - L1_Mm LINE L1 -82 5801 5746 1 1734 2802 28 0 0 chrX 150629254 150629576 -16020720 - RLTRETN_Mm LTR ERVK 0 322 1 1 1734 7676 109 31 7 chrX 150629576 150630880 -16019416 - L1_Mm LINE L1 -138 5745 4193 1 1734 519 17 0 0 chrX 150630880 150630940 -16019356 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 1734 7407 202 130 6 chrX 150630940 150631515 -16018781 - L1_Mm LINE L1 -1688 4192 3616 1 1734 455 33 0 0 chrX 150631510 150631570 -16018726 + L1_Mm LINE L1 1276 1335 -4548 1 1734 3110 174 18 46 chrX 150631580 150632984 -16017312 - L1Md_F LINE L1 -2141 1676 312 1 1734 1352 140 0 13 chrX 150633038 150633269 -16017027 - L1_Mur1 LINE L1 -86 5800 5573 1 1734 2716 202 23 8 chrX 150633868 150634834 -16015462 - Lx2B LINE L1 -771 6229 5246 1 1734 6022 67 0 1 chrX 150634847 150635627 -16014669 - L1_Mus1 LINE L1 0 6567 5789 1 1734 1991 192 42 14 chrX 150635675 150636102 -16014194 + RLTR25B LTR ERVK 131 569 -459 1 1734 2638 183 32 3 chrX 150636107 150637030 -16013266 - L1VL4 LINE L1 -2081 1478 525 1 1734 303 49 0 0 chrX 150637219 150637260 -16013036 + (T)n Simple_repeat Simple_repeat 1 41 0 1 1734 881 326 87 71 chrX 150637415 150637618 -16012678 - MTC-int LTR MaLR -2 1256 1029 1 1734 2379 110 3 0 chrX 150637618 150637944 -16012352 - ORR1A2 LTR MaLR 0 327 1 1 1734 9490 157 70 22 chrX 150637944 150639817 -16010479 - ORR1A2-int LTR MaLR 0 1963 2 1 1734 1947 142 12 58 chrX 150639818 150640161 -16010135 - ORR1A2 LTR MaLR 0 327 1 1 1734 881 326 87 71 chrX 150640161 150640670 -16009626 - MTC-int LTR MaLR -230 1028 531 1 1734 402 256 89 15 chrX 150640737 150640872 -16009424 - ORR1D1 LTR MaLR -224 150 6 1 1734 2468 204 59 62 chrX 150644088 150644814 -16005482 + L1Md_F LINE L1 412 1135 -5384 1 1734 2789 124 16 0 chrX 150644784 150645291 -16005005 + MusHAL1 LINE L1 1 515 -2197 1 1734 395 283 14 16 chrX 150645339 150645528 -16004768 + L1VL1 LINE L1 87 392 -6030 1 1734 349 268 48 8 chrX 150645590 150645714 -16004582 + L1_Mus3 LINE L1 664 792 -5824 1 1734 11984 162 7 38 chrX 150645714 150647027 -16003269 + L1_Mus3 LINE L1 708 1930 -3953 1 1734 3090 37 48 0 chrX 150647027 150647405 -16002891 + MTA_Mm LTR MaLR 1 396 0 1 1734 11984 136 3 6 chrX 150647405 150648826 -16001470 + L1_Mus3 LINE L1 1931 3355 -2528 1 1734 4076 95 1 61 chrX 150648822 150650117 -16000179 + L1Md_F2 LINE L1 511 1725 -4158 1 1734 17385 70 1 0 chrX 150650109 150652502 -15997794 + L1Md_F2 LINE L1 3191 5586 -297 1 1734 7908 58 2 2 chrX 150652502 150653498 -15996798 + L1Md_F2 LINE L1 5587 6582 0 1 1734 14428 138 8 4 chrX 150653502 150656786 -15993510 + L1_Mus3 LINE L1 3340 6635 -3 1 1734 5941 219 30 12 chrX 150656790 150658564 -15991732 + Lx4B LINE L1 5190 6998 -60 1 1734 620 56 11 0 chrX 150658599 150658688 -15991608 + (TAAA)n Simple_repeat Simple_repeat 2 91 0 1 1734 231 184 0 0 chrX 150659103 150659141 -15991155 + B2_Mm2 SINE B2 1 38 -157 1 1734 343 288 88 49 chrX 150659290 150659555 -15990741 + RLTR13D3 LTR ERVK 750 1114 0 1 1734 2809 213 20 8 chrX 150659556 150660196 -15990100 + Lx5 LINE L1 5828 6475 -575 1 1734 298 271 0 0 chrX 150661047 150661117 -15989179 + CT-rich Low_complexity Low_complexity 3 72 0 1 1734 1483 228 16 37 chrX 150661666 150662044 -15988252 + Lx5 LINE L1 6458 6827 -223 1 1734 1445 137 42 8 chrX 150662044 150662309 -15987987 + Lx2 LINE L1 6720 6993 -4 1 1734 31 0 0 0 chrX 150662309 150662340 -15987956 + AT_rich Low_complexity Low_complexity 1 31 0 1 1734 1033 94 0 0 chrX 150662345 150662483 -15987813 + B1_Mm SINE Alu 2 139 -8 1 1734 4309 274 62 14 chrX 150662503 150664003 -15986293 + Lx7 LINE L1 5800 7351 -345 1 1734 494 31 16 0 chrX 150664003 150664067 -15986229 + (TG)n Simple_repeat Simple_repeat 1 65 0 1 1734 4309 274 62 14 chrX 150664067 150664169 -15986127 + Lx7 LINE L1 7352 7479 -217 1 1734 24 0 0 0 chrX 150664290 150664314 -15985982 + AT_rich Low_complexity Low_complexity 1 24 0 1 1734 378 0 0 0 chrX 150664339 150664381 -15985915 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1734 2113 247 35 32 chrX 150664438 150665414 -15984882 + Lx7 LINE L1 5232 6213 -1483 1 1734 482 193 117 0 chrX 150665430 150665574 -15984722 - MTC-int LTR MaLR -782 476 227 1 1734 318 290 38 168 chrX 150665611 150665951 -15984345 + L1VL1 LINE L1 62 357 -6065 1 1734 402 260 16 8 chrX 150666032 150666160 -15984136 + L1Md_F LINE L1 675 803 -5813 1 1734 13405 144 7 22 chrX 150666168 150669133 -15981163 + L1Md_F LINE L1 725 3637 -2246 1 1734 278 282 135 41 chrX 150669911 150670081 -15980215 + RMER5 LTR ERV1 90 275 -259 1 1734 450 324 81 79 chrX 150674780 150675236 -15975060 + MT2A LTR ERVL 1 457 -76 1 1734 663 13 0 0 chrX 150675242 150675318 -15974978 + (GA)n Simple_repeat Simple_repeat 1 76 0 1 1734 37738 30 1 6 chrX 150675472 150681657 -15968639 - L1Md_A LINE L1 0 6582 440 1 1734 707 314 83 6 chrX 150681741 150682055 -15968241 - MTE-int LTR MaLR -1171 409 72 1 1734 7130 177 21 5 chrX 150683126 150684646 -15965650 - Lx2 LINE L1 -7 6990 5450 1 1734 1141 224 11 35 chrX 150684674 150684961 -15965335 - Lx6 LINE L1 -1 7459 7180 1 1734 2491 7 0 0 chrX 150684958 150685258 -15965038 + L1_Mm LINE L1 3877 4176 -1707 1 1734 10770 193 10 24 chrX 150685257 150687796 -15962500 - Lx2 LINE L1 -428 5449 2947 1 1734 6336 132 8 7 chrX 150687818 150689461 -15960835 - L1_Mus2 LINE L1 -1 6565 4922 1 1734 1005 128 0 0 chrX 150689462 150689603 -15960693 + B1_Mus1 SINE Alu 5 145 -3 1 1734 8108 78 6 3 chrX 150689669 150690795 -15959501 + ORR1A1-int LTR MaLR 663 1792 0 1 1734 2708 69 0 0 chrX 150690795 150691141 -15959155 + ORR1A1 LTR MaLR 1 346 0 1 1734 5636 103 6 38 chrX 150691141 150692570 -15957726 - L1VL1 LINE L1 -4098 1785 410 1 1734 451 122 0 0 chrX 150692572 150692654 -15957642 - Lx2 LINE L1 -5797 1187 1106 1 1734 2806 90 15 5 chrX 150692655 150693066 -15957230 - BGLII LTR ERVK 0 421 7 1 1734 755 282 0 4 chrX 150693071 150693299 -15956997 - L1VL4 LINE L1 -5555 747 521 1 1734 710 324 33 21 chrX 150693345 150693676 -15956620 + MTE-int LTR MaLR 48 382 -1198 1 1734 757 254 53 18 chrX 150693703 150693931 -15956365 + Lx5 LINE L1 6570 6805 -245 1 1734 3626 166 26 25 chrX 150693926 150694290 -15956006 - L1_Mur2 LINE L1 -3466 2411 2050 1 1734 444 67 0 0 chrX 150694290 150694350 -15955946 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 1734 3626 166 26 25 chrX 150694350 150694814 -15955482 - L1_Mur2 LINE L1 -3828 2049 1582 1 1734 1231 239 94 38 chrX 150694815 150695210 -15955086 + BGLII_B LTR ERVK 1 417 -24 1 1734 2278 274 74 70 chrX 150695259 150696383 -15953913 + MYSERV6-int LTR ERVK 1615 2742 -6217 1 1734 1771 188 16 10 chrX 150696387 150696694 -15953602 - RLTR27 LTR ERVK 0 309 1 1 1734 1374 152 15 23 chrX 150696694 150696957 -15953339 - IAP-d-int LTR ERVK 0 7581 7321 1 1734 644 325 37 35 chrX 150697099 150697724 -15952572 - IAP-d-int LTR ERVK -520 7061 6436 1 1734 1714 61 165 0 chrX 150698114 150698467 -15951829 - IAP-d-int LTR ERVK -1124 5418 5007 1 1734 695 223 0 0 chrX 150698467 150698624 -15951672 - IAP-d-int LTR ERVK -6039 503 347 1 1734 567 107 25 51 chrX 150698624 150698742 -15951554 - IAP-d-int LTR ERVK -6371 171 57 1 1734 309 183 0 53 chrX 150698742 150698817 -15951479 - IAP-d-int LTR ERVK -6388 154 84 1 1734 279 143 0 0 chrX 150698812 150698854 -15951442 - MMERVK10C-int LTR ERVK -7314 267 226 1 1734 1885 138 16 26 chrX 150698891 150699203 -15951093 - RLTR27 LTR ERVK 0 309 1 1 1734 4194 229 25 21 chrX 150699209 150700349 -15949947 + MYSERV6-int LTR ERVK 2747 3891 -5068 1 1734 634 180 23 14 chrX 150700479 150700637 -15949659 - L1_Mur2 LINE L1 -4293 1590 1437 1 1734 3697 238 67 23 chrX 150701223 150701807 -15948489 - Lx5 LINE L1 -3 7047 6441 1 1734 216 0 0 0 chrX 150701807 150701831 -15948465 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 1734 324 0 0 0 chrX 150701831 150701866 -15948430 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1734 3697 238 67 23 chrX 150701866 150702298 -15947998 - Lx5 LINE L1 -610 6440 5986 1 1734 3369 152 34 49 chrX 150702301 150703118 -15947178 + L1_Mur2 LINE L1 2974 3778 -2099 1 1734 549 0 0 0 chrX 150703243 150703304 -15946992 + (TTTCC)n Simple_repeat Simple_repeat 3 63 0 1 1734 733 138 7 7 chrX 150703304 150703450 -15946846 + CT-rich Low_complexity Low_complexity 2 147 0 1 1734 591 313 5 36 chrX 150704021 150704240 -15946056 + Lx5 LINE L1 6836 7047 -3 1 1734 1047 299 21 73 chrX 150704381 150704929 -15945367 - RMER1A Other Other -530 536 1 1 1734 1056 276 4 0 chrX 150704951 150705219 -15945077 - MERVL_2A-int LTR ERVL -4022 1739 1471 1 1734 2673 77 25 13 chrX 150705220 150705613 -15944683 - ORR1A1-int LTR MaLR -1394 398 1 1 1734 2625 81 0 9 chrX 150705613 150705962 -15944334 - ORR1A1 LTR MaLR 0 346 1 1 1734 24511 116 16 14 chrX 150705962 150707418 -15942878 + L1_Mus1 LINE L1 1781 3217 -2666 1 1734 3064 64 8 0 chrX 150707418 150707810 -15942486 - MTA_Mm LTR MaLR -1 395 1 1 1734 8736 58 4 0 chrX 150707810 150708904 -15941392 - MTA_Mm-int LTR MaLR 0 1098 1 1 1734 2973 72 13 0 chrX 150708904 150709295 -15941001 - MTA_Mm LTR MaLR 0 396 1 1 1734 24511 116 16 14 chrX 150709295 150711297 -15938999 + L1_Mus1 LINE L1 3218 5232 -651 1 1734 441 0 0 0 chrX 150711297 150711346 -15938950 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 1734 24511 108 10 12 chrX 150711346 150712667 -15937629 + L1_Mus1 LINE L1 5233 6566 -1 1 1734 3866 185 21 2 chrX 150712686 150713563 -15936733 + MusHAL1 LINE L1 1175 2063 -3823 1 1734 1839 203 14 13 chrX 150713563 150714050 -15936246 + Lx5 LINE L1 5523 6015 -1035 1 1734 997 137 18 0 chrX 150714058 150714226 -15936070 - RLTR12A LTR ERVK -397 171 1 1 1734 455 196 11 11 chrX 150714230 150714323 -15935973 - ORR1C1 LTR MaLR -210 168 76 1 1734 251 149 90 0 chrX 150714343 150714410 -15935886 - L1M2 LINE L1 -3321 2822 2750 1 1734 1776 136 86 0 chrX 150714647 150714948 -15935348 + IAPEY3_LTR LTR ERVK 1 327 -5 1 1734 41704 113 15 5 chrX 150714951 150722138 -15928158 + IAPEY3-int LTR ERVK 1 7254 -259 1 1734 1162 224 52 12 chrX 150722210 150722553 -15927743 + IAPEz-int LTR ERVK 6125 6481 0 1 1734 1712 144 94 0 chrX 150722553 150722852 -15927444 + IAPEY3_LTR LTR ERVK 1 327 -5 1 1734 1733 38 0 0 chrX 150723413 150723625 -15926671 + L1Md_A LINE L1 6369 6580 -2 1 1734 3313 189 41 8 chrX 150724683 150725412 -15924884 - L1_Mm LINE L1 -211 5672 4920 1 1734 1251 71 0 21 chrX 150725406 150725593 -15924703 - L1_Mus1 LINE L1 -531 6035 5853 1 1734 3390 86 12 20 chrX 150725591 150726100 -15924196 + L1_Mus1 LINE L1 6025 6529 -38 1 1734 1765 109 0 0 chrX 150726100 150726348 -15923948 + L1_Mus2 LINE L1 6319 6566 0 1 1734 13170 174 41 4 chrX 150726348 150727150 -15923146 - L1_Mm LINE L1 -945 4938 4077 1 1734 486 0 0 0 chrX 150727150 150727204 -15923092 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 1734 13170 174 41 4 chrX 150727204 150729233 -15921063 - L1_Mm LINE L1 -1807 4076 2006 1 1734 6384 127 22 0 chrX 150729261 150730379 -15919917 + L1_Mus1 LINE L1 1230 2372 -3511 1 1734 1276 92 11 0 chrX 150730358 150730543 -15919753 + L1Md_F2 LINE L1 5973 6159 -423 1 216 10236 110 15 25 chrX 150730530 150733021 -15917275 + L1_Mus1 LINE L1 4104 6566 -1 1 1735 2982 158 23 42 chrX 150733026 150733628 -15916668 + RLTR13C1 LTR ERVK 296 983 0 1 1735 347 85 0 119 chrX 150734711 150734778 -15915518 - B1_Mm SINE Alu 0 147 89 1 1735 321 318 0 0 chrX 150735320 150735408 -15914888 + MT2B LTR ERVL 1 88 -445 1 1735 4391 155 32 107 chrX 150735469 150736096 -15914200 + L1VL2 LINE L1 69 654 -5681 2 1735 2277 81 13 0 chrX 150736096 150736404 -15913892 + L1_Mus1 LINE L1 6250 6561 -6 2 1735 4391 155 32 107 chrX 150736404 150736427 -15913869 + L1VL2 LINE L1 655 655 -5680 2 1735 645 14 0 0 chrX 150736427 150736501 -15913795 + (GAAA)n Simple_repeat Simple_repeat 2 75 0 2 1735 4391 124 18 71 chrX 150736501 150736973 -15913323 + L1VL2 LINE L1 655 1113 -2502 2 1735 7869 168 12 21 chrX 150736962 150738588 -15911708 + L1_Mur2 LINE L1 3521 5131 -746 2 1735 4868 126 62 20 chrX 150738587 150739440 -15910856 + Lx LINE L1 5650 6538 -116 2 1735 578 345 22 68 chrX 150739522 150739845 -15910451 + MT2B LTR ERVL 253 560 -41 1 1735 205 256 0 0 chrX 150739891 150739934 -15910362 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 2 1735 1683 33 0 0 chrX 150739943 150740154 -15910142 - L1_Mm LINE L1 -3014 2869 2659 2 1735 446 217 33 57 chrX 150740154 150740276 -15910020 + RMER17C LTR ERVK 263 381 -29 2 1735 405 0 0 0 chrX 150740279 150740324 -15909972 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 1735 292 152 49 33 chrX 150740335 150740396 -15909900 + RMER17C-int LTR ERVK 1 62 -3176 2 1735 189 0 0 0 chrX 150740519 150740540 -15909756 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2 1735 294 29 0 0 chrX 150740540 150740575 -15909721 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1735 5079 129 25 8 chrX 150740927 150741770 -15908526 + Lx3A LINE L1 6110 6966 -15 2 1735 27 49 0 0 chrX 150741784 150741825 -15908471 + AT_rich Low_complexity Low_complexity 1 41 0 2 1735 253 264 52 67 chrX 150742017 150742151 -15908145 + L1VL2 LINE L1 284 415 -5920 2 1735 2300 171 10 2 chrX 150742149 150742436 -15907860 + Lx LINE L1 858 1147 -5510 2 1735 3055 27 8 8 chrX 150742436 150742804 -15907492 + L1Md_F3 LINE L1 6203 6570 -14 2 1735 16486 179 86 39 chrX 150742804 150746304 -15903992 + Lx LINE L1 1148 4876 -1778 2 1735 225 244 52 72 chrX 150746304 150746401 -15903895 - RMER20A LTR ERVK -236 280 186 2 1735 16486 179 86 39 chrX 150746401 150748063 -15902233 + Lx LINE L1 4877 6648 -6 2 1735 6353 182 44 11 chrX 150748091 150749960 -15900336 + Lx2 LINE L1 5086 6984 -13 2 1735 7190 144 52 11 chrX 150749980 150751370 -15898926 + L1_Mur2 LINE L1 3699 5145 -732 2 1735 255 247 0 52 chrX 150751566 150751643 -15898653 + B1_Mur1 SINE Alu 77 149 0 2 1735 790 182 9 75 chrX 150751910 150752136 -15898160 + L1_Mur2 LINE L1 1607 1817 -4060 2 1735 1483 127 10 49 chrX 150752147 150752453 -15897843 + L1_Mur2 LINE L1 2061 2354 -3523 2 1735 2387 157 51 2 chrX 150752456 150752908 -15897388 + RMER17D2 LTR ERVK 1 474 -335 2 1735 6592 137 4 66 chrX 150752908 150755587 -15894709 - L1_Mus1 LINE L1 -32 6535 4187 2 1735 7096 136 5 1 chrX 150755588 150756813 -15893483 + L1_Mm LINE L1 2057 3286 -2597 2 1735 1911 167 108 3 chrX 150756813 150757173 -15893123 + RLTR9D LTR ERVK 1 398 -5 2 1735 2769 303 40 24 chrX 150757236 150759198 -15891098 + ETnERV2-int LTR ERVK 1242 3106 -3061 2 1735 2302 96 126 0 chrX 150759203 150759568 -15890728 - IAPLTR2a LTR ERVK 0 411 1 2 1735 5910 34 4 12 chrX 150759570 150760320 -15889976 - IAPEz-int LTR ERVK -2 6479 5736 2 1735 2162 58 0 0 chrX 150760319 150760597 -15889699 - IAPEz-int LTR ERVK -4845 1636 1359 2 1735 3417 57 1 16 chrX 150760597 150761175 -15889121 - IAPEz-int LTR ERVK -5819 662 168 2 1735 240 250 0 0 chrX 150761175 150761219 -15889077 - RLTR27 LTR ERVK -34 275 232 2 1735 272 81 0 0 chrX 150761219 150761256 -15889040 - IAPEz-int LTR ERVK -7400 181 145 2 1735 240 250 0 0 chrX 150761256 150761300 -15888996 - RLTR27 LTR ERVK -34 275 232 2 1735 272 81 0 0 chrX 150761300 150761337 -15888959 - IAPEz-int LTR ERVK -7400 181 145 2 1735 229 267 0 0 chrX 150761337 150761382 -15888914 - RLTR27 LTR ERVK -34 275 231 2 1735 473 90 147 20 chrX 150761382 150761484 -15888812 - IAPEz-int LTR ERVK -6358 123 9 2 1735 2344 91 129 3 chrX 150761485 150761850 -15888446 - IAPLTR2a LTR ERVK 0 411 1 2 1735 12953 160 18 16 chrX 150761855 150764189 -15886107 + ETnERV2-int LTR ERVK 3173 6227 -1179 2 1735 729 243 26 31 chrX 150764238 150764433 -15885863 + ETnERV2-int LTR ERVK 6228 6421 -985 2 1735 279 134 87 29 chrX 150764650 150764719 -15885577 + ETnERV2-int LTR ERVK 7332 7404 -2 2 1735 2292 168 23 8 chrX 150764720 150765117 -15885179 + RLTR9D LTR ERVK 1 403 0 2 1735 14744 132 22 6 chrX 150765117 150767743 -15882553 + L1_Mus2 LINE L1 3284 6019 -547 2 1735 2727 96 31 8 chrX 150767743 150768130 -15882166 - MTA_Mm LTR MaLR 0 396 1 2 1735 4447 140 76 73 chrX 150768130 150768738 -15881558 + L1_Mus2 LINE L1 6020 6563 -3 2 1735 387 0 0 0 chrX 150768761 150768804 -15881492 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 1735 1128 128 0 0 chrX 150768804 150768982 -15881314 + (GA)n Simple_repeat Simple_repeat 2 180 0 2 1735 8270 112 23 5 chrX 150768985 150771131 -15879165 + Lx3_Mus LINE L1 4674 6866 -143 2 1735 373 255 92 26 chrX 150772010 150772163 -15878133 + RMER5 LTR ERV1 113 275 -259 2 1735 200 175 85 34 chrX 150773736 150773795 -15876501 - L3 LINE CR1 -4402 87 26 2 1735 6953 130 3 1 chrX 150774888 150776088 -15874208 - L1_Mm LINE L1 -1633 4250 3048 2 1735 383 306 8 8 chrX 150778103 150778225 -15872071 + MT2B LTR ERVL 2 123 -410 2 1735 490 293 105 42 chrX 150778267 150778575 -15871721 + MT2B LTR ERVL 99 556 -45 2 1735 906 333 27 3 chrX 150778819 150779195 -15871101 - MTE2b-int LTR MaLR -1171 409 25 2 1735 831 328 41 11 chrX 150779222 150779549 -15870747 - MTE2b LTR MaLR 0 379 28 2 1735 213 351 14 0 chrX 150779689 150779763 -15870533 + B1F SINE Alu 9 83 -66 2 1735 2339 164 33 6 chrX 150780354 150780834 -15869462 - L1Md_F LINE L1 -5399 1120 628 2 1735 302 299 0 49 chrX 150780962 150781106 -15869190 - L1VL1 LINE L1 -6148 274 138 2 1735 3726 104 13 7 chrX 150781168 150781788 -15868508 - L1_Mur2 LINE L1 -1357 4520 3897 2 1735 302 182 0 0 chrX 150782875 150782930 -15867366 - L1_Mur2 LINE L1 -1967 3910 3856 2 1735 719 137 0 25 chrX 150782930 150783050 -15867246 + ORR1A2 LTR MaLR 211 327 0 2 1735 1633 131 70 3 chrX 150783051 150783381 -15866915 - L1_Mur2 LINE L1 -2124 3753 3402 2 1735 492 254 21 129 chrX 150783402 150783682 -15866614 + L1VL1 LINE L1 55 496 -5926 2 1735 340 89 0 69 chrX 150783865 150783937 -15866359 - MMVL30-int LTR ERV1 -2859 839 773 2 1735 218 113 54 54 chrX 150784309 150784365 -15865931 + (CAGA)n Simple_repeat Simple_repeat 4 59 0 2 1735 273 335 50 77 chrX 150784484 150784782 -15865514 - RLTR41 LTR ERV1 -45 401 112 2 1735 2714 204 23 154 chrX 150784983 150786128 -15864168 - L1_Mur2 LINE L1 -460 5417 4423 2 1735 16854 126 33 34 chrX 150786153 150788194 -15862102 - L1_Mus1 LINE L1 -1 6566 4487 2 1735 227 270 0 129 chrX 150788194 150788279 -15862017 + RMER21A LTR ERV1 420 493 -454 2 1735 16854 126 33 34 chrX 150788279 150790213 -15860083 - L1_Mus1 LINE L1 -1 4486 2514 2 1735 8290 163 48 69 chrX 150790210 150790293 -15860003 - L1_Mur2 LINE L1 -1440 4437 4361 2 1735 222 62 0 0 chrX 150790293 150790325 -15859971 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 2 1735 8290 163 48 69 chrX 150790325 150790723 -15859573 - L1_Mur2 LINE L1 -1517 4360 3977 2 1735 4289 146 52 17 chrX 150790723 150791504 -15858792 + RMER17D2 LTR ERVK 1 809 0 2 1735 8290 163 48 69 chrX 150791504 150792404 -15857892 - L1_Mur2 LINE L1 -1901 3976 3027 2 1735 1194 123 0 6 chrX 150792404 150792584 -15857712 - B2_Mm2 SINE B2 -14 181 3 2 1735 8290 163 48 69 chrX 150792584 150793332 -15856964 - L1_Mur2 LINE L1 -2851 3026 2352 2 1735 2007 147 82 12 chrX 150793332 150793744 -15856552 - RMER17D2 LTR ERVK 0 809 369 2 1735 4176 177 40 27 chrX 150793767 150795024 -15855272 + L1Md_F LINE L1 98 1415 -2499 2 1735 666 237 48 5 chrX 150795030 150795217 -15855079 - MYSERV-int LTR ERVK -3416 3134 2940 2 1735 1164 148 21 25 chrX 150795245 150795481 -15854815 + Lx3B LINE L1 5839 6073 -900 2 1735 362 236 124 0 chrX 150795484 150795573 -15854723 - ORR1C1 LTR MaLR -278 100 1 2 1735 415 255 28 28 chrX 150795573 150795718 -15854578 + L1_Mur3 LINE L1 2476 2620 -3260 2 1735 612 233 22 14 chrX 150795719 150795941 -15854355 + L1_Mur3 LINE L1 2851 3074 -2806 2 1735 1016 80 0 0 chrX 150795933 150796070 -15854226 + L1_Mus1 LINE L1 6111 6247 -320 2 1735 465 107 0 0 chrX 150796070 150796145 -15854151 + L1_Mus1 LINE L1 6493 6567 0 2 1735 519 216 59 0 chrX 150796254 150796458 -15853838 + L1_Mur3 LINE L1 3045 3260 -2620 2 1735 2763 189 18 75 chrX 150796456 150797450 -15852846 + L1Md_F LINE L1 504 1393 -4490 2 1735 1876 122 9 59 chrX 150797452 150797791 -15852505 + RLTRETN_Mm LTR ERVK 1 322 0 2 1735 14545 63 7 16 chrX 150797792 150799848 -15850448 + MMETn-int LTR ERVK 2 3151 -4255 2 1735 30 45 0 0 chrX 150799849 150799893 -15850403 + AT_rich Low_complexity Low_complexity 1 44 0 2 1735 7640 51 8 1 chrX 150799894 150801585 -15848711 - L1Md_F3 LINE L1 -15 6569 4868 2 1735 16935 105 16 34 chrX 150801585 150804452 -15845844 + MMETn-int LTR ERVK 2030 4844 0 2 1735 1786 129 12 59 chrX 150804452 150804790 -15845506 + RLTRETN_Mm LTR ERVK 1 322 0 2 1735 3852 137 9 51 chrX 150804790 150805628 -15844668 + L1Md_F LINE L1 1390 2192 -3691 2 1735 430 254 53 0 chrX 150805634 150805748 -15844548 - Lx6 LINE L1 -1212 6248 6129 2 1735 527 241 5 124 chrX 150805748 150805821 -15844475 - MT2B LTR ERVL 0 601 544 2 1735 440 48 16 0 chrX 150805821 150805884 -15844412 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 2 1735 489 92 0 0 chrX 150805893 150805969 -15844327 + (CA)n Simple_repeat Simple_repeat 2 77 0 2 1735 527 241 5 124 chrX 150805969 150806070 -15844226 - MT2B LTR ERVL -67 534 439 2 1735 824 171 18 12 chrX 150806073 150806239 -15844057 - MERVL_2A-int LTR ERVL -5582 179 13 2 1735 246 188 0 77 chrX 150806247 150806299 -15843997 - MT2B LTR ERVL -2 582 535 2 1735 220 176 29 0 chrX 150806309 150806377 -15843919 + (TA)n Simple_repeat Simple_repeat 2 71 0 2 1735 408 270 51 58 chrX 150806377 150806632 -15843664 - MT2B LTR ERVL -59 542 194 2 1735 898 264 52 122 chrX 150806730 150807387 -15842909 + L1VL4 LINE L1 141 751 -5584 2 1735 5284 80 1 0 chrX 150807384 150808118 -15842178 - L1Md_F2 LINE L1 -304 5579 4845 2 1735 7294 80 2 8 chrX 150808124 150809115 -15841181 + L1Md_F2 LINE L1 5587 6571 -11 2 1735 7153 159 38 34 chrX 150809117 150811029 -15839267 + L1VL4 LINE L1 746 2665 -950 2 1735 15713 141 17 3 chrX 150811045 150813932 -15836364 + L1_Mm LINE L1 1606 4533 -1350 2 1735 26292 132 12 6 chrX 150813938 150819426 -15830870 - L1_Mus1 LINE L1 0 6567 1073 2 1735 2011 215 8 0 chrX 150819426 150819900 -15830396 - L1_Mus1 LINE L1 -5413 1203 726 2 1735 314 288 45 8 chrX 150819911 150820044 -15830252 - L1_Mus1 LINE L1 -5815 801 664 2 1735 356 292 27 22 chrX 150820081 150820284 -15830012 - L1VL1 LINE L1 -6030 392 88 2 1735 6183 139 3 6 chrX 150820376 150821445 -15828851 + L1Md_F2 LINE L1 4521 5586 -297 2 1735 8058 47 3 0 chrX 150821446 150822438 -15827858 + L1Md_F2 LINE L1 5588 6582 0 2 1735 6917 193 22 6 chrX 150822451 150824393 -15825903 + Lx2 LINE L1 5029 6995 -2 2 1735 489 331 18 18 chrX 150825633 150825796 -15824500 + MTE2b LTR MaLR 28 190 -189 2 1735 3846 166 24 4 chrX 150825796 150826816 -15823480 + L1Md_F LINE L1 435 1478 -4405 2 1735 598 78 20 0 chrX 150827380 150827482 -15822814 + (TG)n Simple_repeat Simple_repeat 2 105 0 2 1735 330 230 53 60 chrX 150829034 150829170 -15821126 + RLTR13D3 LTR ERVK 977 1070 -44 2 1735 2780 243 18 41 chrX 150830320 150831334 -15818962 + L1_Mur2 LINE L1 3812 4801 -1076 2 1735 720 111 0 0 chrX 150831537 150831663 -15818633 + (TC)n Simple_repeat Simple_repeat 2 127 0 2 1735 775 320 44 35 chrX 150831787 150832215 -15818081 + Lx7 LINE L1 6539 6970 -726 2 1735 3781 166 73 17 chrX 150832827 150833593 -15816703 - RMER17D2 LTR ERVK 0 809 1 2 1735 1376 97 0 0 chrX 150835029 150835215 -15815081 + B2_Mm1a SINE B2 1 186 -7 2 1735 585 332 102 29 chrX 150836980 150837634 -15812662 + Lx7 LINE L1 6139 6840 -856 2 1735 443 60 15 0 chrX 150839014 150839081 -15811215 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 1735 678 285 134 37 chrX 150840337 150840665 -15809631 - RLTR9A LTR ERVK -8 360 1 2 1735 830 350 13 3 chrX 150841154 150841452 -15808844 - MTD LTR MaLR -108 311 11 2 1735 2012 235 31 143 chrX 150841473 150841899 -15808397 + L1_Mur2 LINE L1 3571 3864 -2013 2 1735 666 37 0 0 chrX 150841899 150841980 -15808316 + (GGAA)n Simple_repeat Simple_repeat 1 81 0 2 1735 2012 235 31 143 chrX 150841980 150842667 -15807629 + L1_Mur2 LINE L1 3865 4560 -1317 2 1735 3944 203 56 71 chrX 150842667 150842994 -15807302 + RMER17B LTR ERVK 1 315 -591 2 1735 1068 116 0 0 chrX 150842994 150843141 -15807155 - B1_Mus1 SINE Alu 0 148 2 2 1735 3944 171 65 27 chrX 150843141 150843775 -15806521 + RMER17B LTR ERVK 306 958 0 2 1735 585 234 16 73 chrX 150843775 150844020 -15806276 + L1_Mur2 LINE L1 4555 4785 -1092 2 1735 334 209 71 0 chrX 150844044 150844169 -15806127 - L1_Mur3 LINE L1 -3661 2219 2061 2 1735 1702 154 12 54 chrX 150844225 150844561 -15805735 + RLTRETN_Mm LTR ERVK 1 322 0 2 1735 302 259 78 36 chrX 150844625 150844817 -15805479 - L1_Mur3 LINE L1 -3802 2075 1876 2 1735 348 227 10 0 chrX 150844813 150844910 -15805386 - L1_Mur3 LINE L1 -1862 4018 3921 2 1735 694 298 53 8 chrX 150844913 150845378 -15804918 - L1_Mur3 LINE L1 -2072 3805 3320 2 1735 355 284 0 0 chrX 150845499 150845594 -15804702 + (CA)n Simple_repeat Simple_repeat 2 96 0 3 1735 1104 263 68 15 chrX 150845616 150846025 -15804271 - Lx9 LINE L1 -204 7440 7010 3 1735 486 347 57 8 chrX 150846151 150846520 -15803776 + Lx7 LINE L1 6566 6952 -744 3 1735 19869 71 15 1 chrX 150846748 150850394 -15799902 - L1Md_F2 LINE L1 0 6582 2956 3 1735 1015 131 0 0 chrX 150850419 150850564 -15799732 - B1_Mus2 SINE Alu -2 145 1 3 1735 189 0 0 0 chrX 150850618 150850639 -15799657 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 3 1735 3503 18 2 0 chrX 150850947 150851342 -15798954 - MTA_Mm LTR MaLR 0 396 1 3 1735 9177 30 4 1 chrX 150851342 150852437 -15797859 - MTA_Mm-int LTR MaLR 0 1098 1 3 1735 3479 20 2 0 chrX 150852437 150852832 -15797464 - MTA_Mm LTR MaLR 0 396 1 3 1735 3682 95 24 7 chrX 150852982 150853534 -15796762 - RLTR10-int LTR ERVK -139 1848 1288 3 1735 3307 67 84 14 chrX 150853581 150854068 -15796228 - IAP-d-int LTR ERVK -1015 5527 5007 3 1735 670 214 26 0 chrX 150854068 150854222 -15796074 - IAP-d-int LTR ERVK -6039 503 346 3 1735 581 134 16 32 chrX 150854215 150854338 -15795958 - IAP-d-int LTR ERVK -6365 177 57 3 1735 180 111 0 0 chrX 150854345 150854372 -15795924 + (GAAA)n Simple_repeat Simple_repeat 4 30 0 3 1735 384 105 0 34 chrX 150854372 150854431 -15795865 - IAP-d-int LTR ERVK -6387 155 99 3 1735 401 163 0 80 chrX 150854490 150854603 -15795693 - RLTR10-int LTR ERVK -1135 852 749 3 1735 2295 36 2 261 chrX 150854657 150855177 -15795119 - RLTR10 LTR ERVK 0 390 6 3 1735 8368 22 0 1 chrX 150855181 150856180 -15794116 - RLTR10-int LTR ERVK 0 1987 990 3 1735 264 278 54 31 chrX 150856262 150856392 -15793904 - RLTR10-int LTR ERVK -5987 1594 1462 3 1735 6865 45 87 2 chrX 150856456 150857376 -15792920 - RLTR10-int LTR ERVK -989 998 1 3 1735 2507 44 2 234 chrX 150857376 150857884 -15792412 - RLTR10 LTR ERVK 0 390 1 3 1735 319 130 0 0 chrX 150858092 150858138 -15792158 - MMERVK10C-int LTR ERVK -7314 267 222 3 1735 1880 112 18 28 chrX 150858186 150858541 -15791755 - RLTR10A LTR ERVK -12 347 12 3 1735 871 160 20 20 chrX 150859960 150860113 -15790183 + BGLII_B LTR ERVK 3 155 -286 3 1735 4554 97 14 2 chrX 150860334 150860994 -15789302 + L1_Mus3 LINE L1 5989 6638 0 3 1735 21 71 0 0 chrX 150861132 150861174 -15789122 + AT_rich Low_complexity Low_complexity 1 42 0 3 1735 315 0 0 0 chrX 150861566 150861601 -15788695 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 3 1735 1281 300 67 9 chrX 150862492 150863164 -15787132 + MYSERV6-int LTR ERVK 473 1183 -7776 3 1735 232 284 29 29 chrX 150863237 150863306 -15786990 - RLTR9A2 LTR ERVK -271 112 44 3 1735 606 57 23 39 chrX 150863686 150863814 -15786482 + (TTTTG)n Simple_repeat Simple_repeat 5 130 0 3 1735 243 0 0 0 chrX 150863811 150863838 -15786458 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 216 5101 274 51 40 chrX 150863852 150866156 -15784140 + MYSERV6-int LTR ERVK 1232 3559 -5400 3 1736 5543 195 23 9 chrX 150866166 150866731 -15783565 - Lx2 LINE L1 0 6997 6435 3 1736 3529 23 0 0 chrX 150866731 150867127 -15783169 + MTA_Mm LTR MaLR 1 396 0 3 1736 9078 37 4 1 chrX 150867127 150868222 -15782074 + MTA_Mm-int LTR MaLR 1 1098 0 3 1736 3529 23 0 0 chrX 150868222 150868618 -15781678 + MTA_Mm LTR MaLR 1 396 0 3 1736 5543 195 23 9 chrX 150868618 150869156 -15781140 - Lx2 LINE L1 -563 6434 5879 3 1736 3374 208 79 14 chrX 150869571 150870461 -15779835 - Lx2 LINE L1 -5 5881 4934 3 1736 183 333 31 41 chrX 150871293 150871390 -15778906 - L2b LINE L2 -177 3198 3103 3 1736 5836 154 18 10 chrX 150872035 150873629 -15776667 - Lx LINE L1 -5 6649 5042 3 1736 2040 112 90 82 chrX 150873630 150874020 -15776276 + RLTR9C LTR ERVK 1 393 0 3 1736 484 222 58 144 chrX 150874021 150874347 -15775949 + ETnERV2-int LTR ERVK 1 298 -4546 3 1736 4510 159 91 39 chrX 150874339 150875451 -15774845 + ETnERV2-int LTR ERVK 1075 2244 -5162 3 1736 1422 166 26 11 chrX 150875442 150875710 -15774586 + ETnERV2-int LTR ERVK 2494 2765 -4641 3 1736 566 159 15 69 chrX 150875707 150875904 -15774392 + ETnERV2-int LTR ERVK 4084 4212 -3032 3 1736 1126 115 0 21 chrX 150875908 150876094 -15774202 + RLTR13D1 LTR ERVK 469 650 -156 3 1736 3409 177 54 80 chrX 150876677 150878643 -15771653 + ETnERV2-int LTR ERVK 2011 5443 -1801 3 1736 355 153 0 0 chrX 150878856 150878928 -15771368 + ETnERV2-int LTR ERVK 7331 7402 -4 3 1736 1914 121 98 85 chrX 150878932 150879320 -15770976 + RLTR9C LTR ERVK 1 393 0 3 1736 16222 200 16 13 chrX 150879326 150884036 -15766260 - Lx LINE L1 -853 5030 305 3 1736 981 244 39 37 chrX 150884043 150884346 -15765950 - L1VL2 LINE L1 -5933 402 9 3 1736 890 208 30 56 chrX 150885029 150885299 -15764997 - L1_Mur2 LINE L1 -957 4920 4658 3 1736 1597 178 134 3 chrX 150885301 150885673 -15764623 - L1_Mur2 LINE L1 -1470 4407 3987 3 1736 1338 162 207 5 chrX 150885664 150886031 -15764265 - MusHAL1 LINE L1 -1752 960 520 3 1736 4641 137 9 0 chrX 150886058 150886797 -15763499 - L1_Mus1 LINE L1 0 6567 5822 3 1736 12035 93 26 1 chrX 150886797 150887949 -15762347 + L1Md_F2 LINE L1 4046 5241 -642 3 1736 405 39 0 0 chrX 150887949 150888000 -15762296 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1736 6255 100 47 0 chrX 150888000 150888343 -15761953 + L1Md_F2 LINE L1 5242 5584 -299 3 1736 6886 96 10 2 chrX 150888344 150888801 -15761495 + L1Md_F2 LINE L1 5587 6044 -538 3 1736 2844 44 3 17 chrX 150888801 150889151 -15761145 + IAPLTR4 LTR ERVK 1 345 0 3 1736 6886 96 10 2 chrX 150889151 150889679 -15760617 + L1Md_F2 LINE L1 6045 6578 -4 3 1736 358 208 0 0 chrX 150889679 150889756 -15760540 - L1VL4 LINE L1 -5617 685 609 3 1736 1472 277 72 26 chrX 150889759 150890681 -15759615 + MYSERV6-int LTR ERVK 3957 4626 -1924 3 1736 572 185 45 182 chrX 150890732 150890930 -15759366 + RLTR25B LTR ERVK 597 767 -261 3 1736 261 349 39 16 chrX 150890918 150891046 -15759250 + RLTR25B LTR ERVK 898 1028 0 3 1736 1864 253 122 19 chrX 150891226 150891828 -15758468 + RMER19A LTR ERVK 1 729 -8 3 1736 280 60 60 0 chrX 150893553 150893603 -15756693 + (TCTCTG)n Simple_repeat Simple_repeat 6 58 0 3 1736 201 74 0 0 chrX 150893604 150893631 -15756665 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1736 2618 226 34 97 chrX 150893819 150894573 -15755723 - RMER21A LTR ERV1 0 947 340 3 1736 685 249 46 19 chrX 150894582 150894639 -15755657 - L1_Mur3 LINE L1 -3114 2766 2711 3 1736 2257 129 96 13 chrX 150894639 150895015 -15755281 - MTB_Mm LTR MaLR 0 407 1 3 1736 685 249 46 19 chrX 150895015 150895219 -15755077 - L1_Mur3 LINE L1 -3170 2710 2498 3 1736 558 93 0 0 chrX 150895439 150895525 -15754771 + (GA)n Simple_repeat Simple_repeat 2 87 0 3 1736 3680 217 30 11 chrX 150895692 150896620 -15753676 + MYSERV6-int LTR ERVK 778 1723 -7236 3 1736 5446 124 23 8 chrX 150896622 150898189 -15752107 + L1Md_F LINE L1 570 2160 -3723 3 1736 2020 151 63 30 chrX 150898192 150898588 -15751708 + RLTR9E LTR ERVK 1 409 0 3 1736 1361 188 85 102 chrX 150898590 150899330 -15750966 + ETnERV2-int LTR ERVK 1075 1515 -5891 3 1736 1283 177 118 44 chrX 150899387 150900141 -15750155 + ETnERV2-int LTR ERVK 1946 3135 -4271 3 1736 3639 163 44 79 chrX 150900385 150902039 -15748257 + ETnERV2-int LTR ERVK 2371 5443 -1801 3 1736 1269 184 23 31 chrX 150902008 150902389 -15747907 + ETnERV2-int LTR ERVK 6222 6451 -955 3 1736 353 95 0 60 chrX 150902459 150902526 -15747770 + RLTR45-int LTR ERVK 6010 6072 -1172 3 1736 1277 177 8 8 chrX 150902539 150902790 -15747506 + ETnERV3-int LTR ERVK 5530 5780 -28 3 1736 1879 186 149 4 chrX 150902799 150903269 -15747027 + RLTR13D6 LTR ERVK 1 539 -363 3 1736 14201 126 17 4 chrX 150903274 150903990 -15746306 + L1_Mus1 LINE L1 3454 4182 -1701 3 1736 207 0 0 0 chrX 150903990 150904013 -15746283 + (ATATG)n Simple_repeat Simple_repeat 3 25 0 3 1736 14201 111 18 3 chrX 150904013 150906209 -15744087 + L1_Mus1 LINE L1 4183 6400 -167 3 1736 500 301 40 14 chrX 150906574 150906722 -15743574 - ETnERV2-int LTR ERVK -185 7221 7070 3 1736 1134 106 0 6 chrX 150906723 150907057 -15743239 + L1_Mus1 LINE L1 6392 6567 0 3 1736 5212 180 46 83 chrX 150907057 150907347 -15742949 + MYSERV6-int LTR ERVK 1717 2001 -6958 3 1736 1114 89 0 0 chrX 150907347 150907493 -15742803 + B1_Mm SINE Alu 2 147 0 3 1736 5212 180 46 83 chrX 150907493 150907929 -15742367 + MYSERV6-int LTR ERVK 2002 2447 -6512 3 1736 225 0 0 0 chrX 150907929 150907954 -15742342 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 3 1736 5212 180 46 83 chrX 150907954 150908338 -15741958 + MYSERV6-int LTR ERVK 2448 2828 -6131 3 1736 1493 68 0 20 chrX 150908338 150908534 -15741762 - B2_Mm1a SINE B2 -1 192 1 3 1736 5212 180 46 83 chrX 150908534 150908831 -15741465 + MYSERV6-int LTR ERVK 2829 3074 -5885 3 1736 360 190 0 23 chrX 150908918 150909004 -15741292 + MYSERV6-int LTR ERVK 4618 4701 -4258 3 1736 1151 160 29 18 chrX 150909068 150909341 -15740955 + MYSERV6-int LTR ERVK 4719 4994 -3965 3 1736 239 224 190 0 chrX 150909341 150909399 -15740897 + B1_Mur4 SINE Alu 1 69 -81 3 1736 276 193 250 0 chrX 150909414 150909463 -15740833 + MYSERV6-int LTR ERVK 5046 5094 -3865 3 1736 264 100 0 0 chrX 150909463 150909503 -15740793 + (TTA)n Simple_repeat Simple_repeat 1 40 0 3 1736 276 193 250 0 chrX 150909503 150909541 -15740755 + MYSERV6-int LTR ERVK 5095 5154 -3805 3 1736 751 232 10 30 chrX 150909573 150909773 -15740523 - Lx4B LINE L1 -8 7050 6855 3 1736 1388 226 50 6 chrX 150909769 150910178 -15740118 + Lx4B LINE L1 6359 6847 -211 3 1736 284 321 0 0 chrX 150910175 150910259 -15740037 - Lx5 LINE L1 -719 6331 6248 3 1736 668 315 0 0 chrX 150910383 150910564 -15739732 - MTD LTR MaLR -220 199 19 3 1736 357 43 0 0 chrX 150911246 150911293 -15739003 + (CAAAC)n Simple_repeat Simple_repeat 4 50 0 3 1736 214 186 0 0 chrX 150911293 150911336 -15738960 + A-rich Low_complexity Low_complexity 1 43 0 3 1736 638 119 0 29 chrX 150911336 150911440 -15738856 + B1_Mus2 SINE Alu 47 147 0 3 1736 823 305 44 27 chrX 150911657 150911950 -15738346 + Lx5 LINE L1 6742 7039 -11 3 1736 771 119 0 25 chrX 150911962 150912083 -15738213 + L1VL2 LINE L1 125 242 -6093 3 1736 946 229 37 33 chrX 150912083 150912327 -15737969 + RLTR9E LTR ERVK 165 409 0 3 1736 2389 76 24 0 chrX 150912327 150912656 -15737640 - MT2C_Mm LTR ERVL -138 337 1 3 1736 280 26 0 0 chrX 150912656 150912694 -15737602 - MERVL-int LTR ERVL 0 5485 5448 3 1736 354 139 26 53 chrX 150912694 150912770 -15737526 - ORR1A3-int LTR MaLR -1323 640 567 3 1736 324 100 67 0 chrX 150912770 150912830 -15737466 - MERVL-int LTR ERVL -132 5629 5566 3 1736 4005 67 4 4 chrX 150912875 150913417 -15736879 - MERVL-int LTR ERVL -129 5356 4815 3 1736 6455 99 28 16 chrX 150913441 150914768 -15735528 + L1VL2 LINE L1 669 2022 -1593 3 1736 714 299 30 22 chrX 150914871 150915278 -15735018 - L1_Mur3 LINE L1 -1232 4648 4239 3 1736 1272 210 7 0 chrX 150915296 150915586 -15734710 + L1_Mur2 LINE L1 4334 4625 -1252 3 1736 207 0 0 0 chrX 150915656 150915679 -15734617 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 3 1736 299 265 41 0 chrX 150915679 150915777 -15734519 + L1_Mur2 LINE L1 4636 4737 -1140 3 1736 208 278 51 10 chrX 150916812 150916910 -15733386 + MIR SINE MIR 96 197 -65 3 1736 3663 137 38 10 chrX 150919266 150919880 -15730416 - Lx3_Mus LINE L1 -18 6991 6361 3 1736 442 252 0 17 chrX 150919924 150920041 -15730255 - L1_Mur1 LINE L1 -6867 115 1 3 1736 706 380 77 69 chrX 150920660 150920814 -15729482 - MTE-int LTR MaLR -131 1449 1287 3 1736 1105 70 7 7 chrX 150920814 150920957 -15729339 + B1_Mm SINE Alu 5 147 0 3 1736 706 380 77 69 chrX 150920957 150921440 -15728856 - MTE-int LTR MaLR -294 1286 807 3 1736 1113 307 14 35 chrX 150921470 150921833 -15728463 + MTD LTR MaLR 6 359 -60 3 1736 468 232 0 0 chrX 150922566 150922691 -15727605 + A-rich Low_complexity Low_complexity 36 160 0 3 1736 549 44 0 0 chrX 150923109 150923177 -15727119 + (AAATG)n Simple_repeat Simple_repeat 5 72 0 3 1736 246 246 46 0 chrX 150924425 150924490 -15725806 - MTD LTR MaLR -16 403 336 3 1736 444 37 0 0 chrX 150924527 150924581 -15725715 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1736 485 341 20 66 chrX 150924619 150924817 -15725479 + B3 SINE B2 28 216 0 3 1736 9946 146 9 6 chrX 150924918 150927538 -15722758 - L1_Mus3 LINE L1 -1 6637 4018 3 1736 18809 143 32 3 chrX 150927695 150931790 -15718506 + L1Md_F LINE L1 319 4535 -1348 3 1736 4628 82 2 9 chrX 150931792 150932423 -15717873 + L1_Mus1 LINE L1 5941 6566 -1 3 1736 239 286 0 0 chrX 150932426 150932482 -15717814 - MTC LTR MaLR -360 61 6 3 1736 1144 314 115 38 chrX 150932502 150933137 -15717159 - MTC-int LTR MaLR -22 1236 553 3 1736 552 30 0 0 chrX 150933247 150933313 -15716983 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 1736 2616 215 43 68 chrX 150933321 150933966 -15716330 - RLTR26 LTR ERVK -13 629 1 3 1736 3862 90 13 11 chrX 150934256 150934809 -15715487 - L1Md_F2 LINE L1 -19 6563 6010 3 1736 3852 79 4 2 chrX 150934809 150935357 -15714939 + L1_Mm LINE L1 4719 5267 -616 3 1736 36694 14 0 63 chrX 150935356 150940544 -15709752 + L1Md_F2 LINE L1 441 5586 -297 3 1736 8865 13 0 0 chrX 150940544 150941540 -15708756 + L1Md_A LINE L1 5587 6582 0 3 1736 36694 23 0 56 chrX 150941540 150942294 -15708002 + L1Md_F2 LINE L1 5587 6006 -576 3 1736 1374 41 0 0 chrX 150942628 150942797 -15707499 + (TTTC)n Simple_repeat Simple_repeat 4 172 0 3 1736 6172 97 10 3 chrX 150942821 150943694 -15706602 - L1Md_F2 LINE L1 -1 6581 5703 3 1736 578 95 24 12 chrX 150943693 150943778 -15706518 + L1Md_F2 LINE L1 5480 5565 -318 3 1736 534 103 0 0 chrX 150944502 150944580 -15705716 + (GGGA)n Simple_repeat Simple_repeat 3 80 0 4 1736 234 62 0 0 chrX 150945429 150945461 -15704835 + (T)n Simple_repeat Simple_repeat 1 32 0 4 1736 1698 296 60 67 chrX 150945487 150945761 -15704535 - Lx7 LINE L1 -32 7664 7434 4 1736 336 48 0 0 chrX 150945761 150945803 -15704493 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1736 1698 296 60 67 chrX 150945803 150946053 -15704243 - Lx7 LINE L1 -263 7433 7176 4 1736 202 29 28 28 chrX 150946053 150946089 -15704207 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 1736 1698 296 60 67 chrX 150946089 150946464 -15703832 - Lx7 LINE L1 -521 7175 6771 4 1736 333 0 0 0 chrX 150946464 150946501 -15703795 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1736 303 28 0 0 chrX 150946501 150946536 -15703760 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 1736 1555 69 0 0 chrX 150946536 150946738 -15703558 - IAPLTR4 LTR ERVK -143 202 1 4 1736 6063 257 49 36 chrX 150946738 150949252 -15701044 - IAPLTR3-int LTR ERVK -351 7329 3468 4 1736 783 111 28 43 chrX 150949361 150949502 -15700794 - MMERVK10C-int LTR ERVK -2911 4670 4532 4 1736 459 179 18 36 chrX 150949530 150949640 -15700656 - IAPLTR3-int LTR ERVK -2380 2464 2357 4 1736 6574 113 67 7 chrX 150949645 150951019 -15699277 - ETnERV3-int LTR ERVK -3135 4271 2735 4 1736 458 178 93 0 chrX 150951134 150951252 -15699044 - ETnERV3-int LTR ERVK -5557 1849 1721 4 1736 1217 209 108 68 chrX 150951249 150951736 -15698560 - ETnERV3-int LTR ERVK -4783 623 255 4 1736 348 169 8 112 chrX 150951855 150952097 -15698199 - IAPLTR3-int LTR ERVK -5867 954 824 4 1736 509 209 17 34 chrX 150952097 150952216 -15698080 - IAPLTR3-int LTR ERVK -6704 117 1 4 1736 2578 73 12 3 chrX 150952216 150952558 -15697738 - IAPLTR4 LTR ERVK 0 345 1 4 1736 261 0 0 0 chrX 150952898 150952927 -15697369 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1736 278 326 73 27 chrX 150953113 150953523 -15696773 + L1_Rod LINE L1 1650 2078 -3769 4 1736 230 264 78 73 chrX 150953548 150953582 -15696714 + Lx7 LINE L1 7470 7500 -196 4 1736 363 121 0 0 chrX 150953582 150953640 -15696656 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1736 230 264 78 73 chrX 150953640 150953809 -15696487 + Lx7 LINE L1 7501 7674 -22 4 1736 2358 19 0 0 chrX 150954049 150954320 -15695976 - L1Md_F2 LINE L1 -657 5925 5655 4 1736 5324 48 0 11 chrX 150954320 150954979 -15695317 + L1Md_F2 LINE L1 5931 6582 0 4 1736 494 183 51 54 chrX 150955023 150955543 -15694753 - MurERV4_19-int LTR ERVK -106 5674 5425 4 1736 604 174 35 51 chrX 150955557 150955812 -15694484 - MurERV4_19-int LTR ERVK -105 5675 5425 4 1736 521 203 42 45 chrX 150955793 150956112 -15694184 - MurERV4_19-int LTR ERVK -119 5661 5429 4 1736 600 181 58 53 chrX 150956087 150957369 -15692927 - MurERV4_19-int LTR ERVK -109 5671 5425 4 1736 776 165 64 36 chrX 150957351 150958007 -15692289 - MurERV4_19-int LTR ERVK -119 5661 5423 4 1736 494 164 98 45 chrX 150958037 150958261 -15692035 - MurERV4_19-int LTR ERVK -119 5661 5438 4 1736 3684 105 2 0 chrX 150958261 150958783 -15691513 - L1_Mus1 LINE L1 -1 6566 6044 4 1736 2322 175 60 73 chrX 150958783 150959870 -15690426 - MurERV4_19-int LTR ERVK -119 5661 5030 4 1736 231 340 76 28 chrX 150960122 150960267 -15690029 - MTE-int LTR MaLR -618 962 811 4 1736 261 410 51 20 chrX 150960316 150960570 -15689726 + MTD LTR MaLR 66 327 -92 4 1736 383 356 77 22 chrX 150961495 150961763 -15688533 + MTD LTR MaLR 6 275 -132 4 1736 1008 178 11 0 chrX 150962907 150963092 -15687204 + B2_Mm1t SINE B2 2 188 -5 4 1736 334 244 43 58 chrX 150964211 150964350 -15685946 - RLTR28B LTR ERVL -285 196 60 4 1736 937 279 11 29 chrX 150964349 150964626 -15685670 - ORR1B2 LTR MaLR -41 326 55 4 1736 8158 174 115 30 chrX 150964655 150965973 -15684323 - L1Md_F2 LINE L1 -1 6581 5112 4 1736 275 224 15 0 chrX 150965973 150966040 -15684256 - ORR1B2 LTR MaLR -316 68 1 4 1736 8158 174 115 30 chrX 150966040 150968049 -15682247 - L1Md_F2 LINE L1 -1 5111 2869 4 1736 3175 139 7 20 chrX 150968040 150968629 -15681667 - L1_Mur1 LINE L1 -3898 1988 1408 4 1736 189 0 0 0 chrX 150968817 150968838 -15681458 + (GA)n Simple_repeat Simple_repeat 2 22 0 4 1736 192 182 0 0 chrX 150968841 150968885 -15681411 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1736 25743 126 12 36 chrX 150969398 150975760 -15674536 - L1_Mus1 LINE L1 0 6567 367 4 1736 260 0 0 54 chrX 150975766 150975803 -15674493 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 4 1736 11977 164 47 60 chrX 150975806 150976619 -15673677 - ETnERV2-int LTR ERVK -4895 2511 1682 4 1736 2130 39 4 0 chrX 150976619 150976876 -15673420 - L1Md_T LINE L1 -1 6581 6324 4 1736 11977 164 47 60 chrX 150976876 150978607 -15671689 - ETnERV2-int LTR ERVK -5725 1681 1 4 1736 4899 146 18 78 chrX 150978623 150979583 -15670713 - RLTR13D6 LTR ERVK 0 902 1 4 1736 379 71 54 0 chrX 150979616 150979672 -15670624 - L1_Mus1 LINE L1 -570 5997 5939 4 1736 3661 80 95 0 chrX 150979674 150980190 -15670106 + L1_Mus1 LINE L1 5998 6562 -5 4 1736 5123 141 19 35 chrX 150980204 150980568 -15669728 + RLTR22_Mur LTR ERVK 962 1327 -521 4 1736 351 0 0 0 chrX 150980568 150980607 -15669689 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1736 5123 141 19 35 chrX 150980607 150981144 -15669152 + RLTR22_Mur LTR ERVK 1328 1848 0 4 1736 366 315 32 47 chrX 150981272 150981462 -15668834 + L1M4c LINE L1 1475 1661 -4723 4 1736 478 296 49 81 chrX 150981463 150981697 -15668599 - L1_Mur3 LINE L1 -2725 3155 2928 4 1736 1197 104 6 0 chrX 150981697 150981870 -15668426 - L1_Mus2 LINE L1 -1 6565 6392 4 1736 494 296 49 80 chrX 150981870 150982213 -15668083 - L1_Mur3 LINE L1 -984 2930 2590 4 1736 1483 176 3 21 chrX 150982211 150982501 -15667795 + L1VL4 LINE L1 469 753 -5549 4 1736 6327 93 9 3 chrX 150982503 150983374 -15666922 + L1_Mus2 LINE L1 5677 6550 -16 4 1736 366 23 0 0 chrX 150983374 150983417 -15666879 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1736 6327 93 9 3 chrX 150983417 150983430 -15666866 + L1_Mus2 LINE L1 6551 6566 0 4 1736 7107 129 18 1 chrX 150983431 150985358 -15664938 + L1_Mus3 LINE L1 4670 6637 -1 4 1736 6541 221 21 14 chrX 150985369 150987183 -15663113 + Lx4B LINE L1 5190 7013 -45 4 1736 3906 91 2 0 chrX 150987183 150987689 -15662607 + IAPEY3-int LTR ERVK 1991 2497 -5183 4 1736 3914 37 0 0 chrX 150987686 150988144 -15662152 + IAPEY3-int LTR ERVK 4785 5242 -2438 4 1736 1340 77 11 5 chrX 150988139 150988323 -15661973 + IAPEY3-int LTR ERVK 3101 3285 -4395 4 1736 3455 75 56 0 chrX 150988325 150989053 -15661243 + IAPEY3-int LTR ERVK 6908 7676 -4 4 1736 2165 66 72 7 chrX 150989066 150989372 -15660924 + IAPEY2_LTR LTR ERVK 32 357 0 4 1736 5679 125 22 3 chrX 150989372 150990252 -15660044 + L1_Mus1 LINE L1 5669 6564 -3 4 1736 1358 112 0 0 chrX 150990268 150990483 -15659813 + L1_Mm LINE L1 1302 1516 -4367 4 1736 8464 116 9 1 chrX 150990500 150992193 -15658103 - L1_Mus1 LINE L1 -1 6566 4869 4 1736 297 0 0 0 chrX 150992193 150992226 -15658070 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 1736 8464 148 16 1 chrX 150992226 150992650 -15657646 - L1_Mus1 LINE L1 -1015 4868 4427 4 1736 4986 139 6 1 chrX 150992634 150993477 -15656819 + L1_Mm LINE L1 1503 2349 -3534 4 1736 195 42 0 0 chrX 150993477 150993501 -15656795 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 4 1736 2943 39 2 93 chrX 150993501 150993930 -15656366 - RLTR10 LTR ERVK 0 390 1 4 3 15819 19 39 42 chrX 150993932 150995919 -15654377 - RLTR10-int LTR ERVK -3 1984 3 4 1737 2904 36 2 94 chrX 150995927 150996352 -15653944 - RLTR10 LTR ERVK -4 386 1 4 1737 666 177 8 0 chrX 150996354 150996484 -15653812 + L1_Mm LINE L1 2349 2479 -3404 4 1737 6747 86 10 4 chrX 150996487 150998348 -15651948 + L1Md_F2 LINE L1 392 2265 -3618 4 1737 3991 117 0 5 chrX 150998345 150998946 -15651350 + L1Md_F2 LINE L1 4989 5586 -297 4 1737 6477 113 10 4 chrX 150998947 150999926 -15650370 + L1Md_F2 LINE L1 5588 6572 -10 4 1737 426 176 0 0 chrX 150999926 151000000 -15650296 + L1_Mus3 LINE L1 6280 6353 -285 4 1737 1571 143 15 4 chrX 151000001 151000274 -15650022 + L1_Mus3 LINE L1 6355 6630 -8 1 1737 12068 186 135 18 chrX 151000280 151001572 -15648724 + Lx3_Mus LINE L1 2139 3439 -2438 2 1737 432 0 0 0 chrX 151001572 151001620 -15648676 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1737 12068 186 135 18 chrX 151001620 151003280 -15647016 + Lx3_Mus LINE L1 3440 5436 -441 2 1737 8899 114 18 18 chrX 151003268 151004656 -15645640 + Lx3_Mus LINE L1 5614 7001 -8 2 1737 22 0 0 0 chrX 151004656 151004678 -15645618 + AT_rich Low_complexity Low_complexity 1 22 0 4 1737 8992 48 1 1 chrX 151004800 151006054 -15644242 - L1Md_F3 LINE L1 -572 6012 4759 5 1737 4646 36 0 4 chrX 151006054 151006616 -15643680 + L1Md_F3 LINE L1 6010 6569 -15 5 1737 350 277 98 63 chrX 151007226 151007511 -15642785 + L1_Mur3 LINE L1 3508 3802 -2078 6 1737 349 256 129 35 chrX 151007992 151008162 -15642134 + RMER5 LTR ERV1 90 275 -259 7 1737 7154 138 4 2 chrX 151010895 151012093 -15638203 - L1_Mm LINE L1 -1633 4250 3051 8 1737 232 341 45 30 chrX 151013156 151013289 -15637007 + Charlie24 DNA MER1_type 1296 1430 -1020 9 1737 434 350 59 65 chrX 151014070 151014525 -15635771 + MT2B LTR ERVL 1 541 -60 1 1737 980 353 26 15 chrX 151014636 151015093 -15635203 - MTE2b-int LTR MaLR -1118 462 1 1 1737 883 326 32 38 chrX 151015106 151015447 -15634849 - MTE2b LTR MaLR -13 366 28 1 1737 5812 151 11 7 chrX 151016488 151017530 -15632766 - L1_Mus1 LINE L1 -2828 3055 2010 1 1737 27302 123 12 4 chrX 151017505 151020477 -15629819 - L1_Mus1 LINE L1 0 6567 3571 1 1737 321 26 0 0 chrX 151020477 151020515 -15629781 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 1 1737 27302 154 31 12 chrX 151020515 151023916 -15626380 - L1_Mus1 LINE L1 -2313 3570 102 1 1737 3220 108 8 2 chrX 151023908 151024428 -15625868 - MusHAL1 LINE L1 -1852 860 338 1 1737 3979 173 37 133 chrX 151024428 151025672 -15624624 - MusHAL1 LINE L1 -950 1762 639 1 1737 260 355 31 25 chrX 151025702 151025861 -15624435 - L1VL2 LINE L1 -5922 413 254 1 1737 4388 18 0 0 chrX 151025973 151026466 -15623830 - MT2_Mm LTR ERVL 0 493 1 1 1737 314 0 0 0 chrX 151026466 151026504 -15623792 - MERVL-int LTR ERVL 0 5485 5448 1 1737 392 167 46 35 chrX 151026504 151026591 -15623705 - ORR1A3-int LTR MaLR -1323 640 553 1 1737 16672 24 1 0 chrX 151026591 151028494 -15621802 - MERVL-int LTR ERVL -125 5360 3457 1 1737 391 204 34 11 chrX 151028492 151028581 -15621715 + MERVL_2A-int LTR ERVL 106 196 -5565 1 1737 592 216 5 134 chrX 151028581 151028691 -15621605 + MT2B2 LTR ERVL 422 520 -64 2 1737 513 68 0 0 chrX 151028691 151028765 -15621531 + (TG)n Simple_repeat Simple_repeat 2 75 0 2 1737 781 54 9 9 chrX 151028765 151028876 -15621420 + (TAGA)n Simple_repeat Simple_repeat 1 112 0 2 1737 592 216 5 134 chrX 151028876 151028951 -15621345 + MT2B2 LTR ERVL 521 583 -1 2 1737 2182 253 18 0 chrX 151028953 151029447 -15620849 + Lx6 LINE L1 6131 6633 -827 2 1737 3491 189 26 9 chrX 151029448 151030096 -15620200 + RLTR17 LTR ERVK 11 669 -23 2 1737 316 301 7 88 chrX 151030101 151030270 -15620026 + RLTR31_Mm LTR ERVK 310 561 0 2 1737 2644 255 89 21 chrX 151030274 151031028 -15619268 + Lx6 LINE L1 6656 7460 0 2 1737 24596 127 13 19 chrX 151031458 151034133 -15616163 - L1_Mus2 LINE L1 -3 6563 3864 2 1737 207 0 0 0 chrX 151034133 151034156 -15616140 + (TTTTG)n Simple_repeat Simple_repeat 5 27 0 2 1737 24596 140 20 30 chrX 151034156 151036608 -15613688 - L1_Mus2 LINE L1 -2020 3863 1478 2 1737 2841 197 25 91 chrX 151036607 151037495 -15612801 - L1_Mus2 LINE L1 -5358 1299 451 2 1737 675 179 51 10 chrX 151037493 151037690 -15612606 - L1_Mur3 LINE L1 -2620 3260 3056 2 1737 213 39 0 0 chrX 151037690 151037716 -15612580 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 1737 3431 88 0 2 chrX 151037816 151038269 -15612027 - L1_Mus1 LINE L1 -5 6562 6111 3 1737 707 246 9 14 chrX 151038273 151038483 -15611813 - L1_Mur3 LINE L1 -2821 3059 2851 2 1737 473 237 69 23 chrX 151038456 151038629 -15611667 - L1_Mur3 LINE L1 -3224 2656 2476 2 1737 330 202 131 0 chrX 151038629 151038713 -15611583 + ORR1C1 LTR MaLR 1 95 -283 3 1737 2859 105 7 0 chrX 151038721 151039129 -15611167 - Lx3B LINE L1 -900 6073 5663 3 1737 651 207 22 0 chrX 151039123 151039258 -15611038 + Lx3B LINE L1 6079 6216 -757 3 1737 1035 241 4 17 chrX 151039257 151039497 -15610799 + Lx3B LINE L1 6731 6967 -6 3 1737 5831 116 17 12 chrX 151039508 151041254 -15609042 + L1VL2 LINE L1 74 1826 -1789 3 1737 29 0 0 0 chrX 151041433 151041462 -15608834 + AT_rich Low_complexity Low_complexity 1 29 0 3 1737 225 280 0 0 chrX 151041498 151041548 -15608748 - PB1D10 SINE Alu -41 76 27 3 1737 186 43 0 0 chrX 151042191 151042214 -15608082 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 3 1737 241 200 125 0 chrX 151043021 151043101 -15607195 + L1M2 LINE L1 2745 2834 -3309 3 1737 456 247 0 0 chrX 151043112 151043205 -15607091 + ORR1C1 LTR MaLR 76 168 -210 3 1737 775 128 92 49 chrX 151043209 151043373 -15606923 + RLTR12A LTR ERVK 1 171 -397 3 1737 1838 208 2 45 chrX 151043381 151043887 -15606409 - Lx5 LINE L1 -1035 6015 5523 3 1737 4434 178 6 0 chrX 151043878 151044838 -15605458 - L1_Mur1 LINE L1 -3813 2073 1106 4 1737 2972 77 0 14 chrX 151044839 151045260 -15605036 - BGLII LTR ERVK 0 421 7 4 1737 905 267 0 4 chrX 151045262 151045503 -15604793 - L1_Mur1 LINE L1 -5879 1105 866 4 1737 718 320 54 33 chrX 151045534 151045867 -15604429 + MTE-int LTR MaLR 43 382 -1198 4 1737 734 191 70 0 chrX 151045873 151046030 -15604266 + Lx4B LINE L1 6554 6721 -337 4 1737 2633 61 0 0 chrX 151046030 151046372 -15603924 - LTRIS2 LTR ERV1 0 564 223 4 1737 7955 52 3 1 chrX 151046414 151048077 -15602219 - L1Md_F2 LINE L1 -13 6569 4904 4 1737 1563 77 8 86 chrX 151048077 151048332 -15601964 - LTRIS2 LTR ERV1 -329 235 1 4 1737 505 209 0 28 chrX 151048332 151048440 -15601856 + Lx4B LINE L1 6718 6822 -236 4 1737 3407 187 28 26 chrX 151048441 151048806 -15601490 - L1_Mur2 LINE L1 -3466 2411 2050 4 1737 378 42 0 0 chrX 151048806 151048854 -15601442 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1737 3407 187 28 26 chrX 151048854 151049317 -15600979 - L1_Mur2 LINE L1 -3828 2049 1582 4 1737 1131 300 67 24 chrX 151049318 151049735 -15600561 + BGLII_B LTR ERVK 1 435 -6 4 1737 2927 284 60 62 chrX 151049743 151050953 -15599343 + MYSERV6-int LTR ERVK 1605 2812 -6147 4 1737 10156 97 7 3 chrX 151050966 151053047 -15597249 - L1Md_F2 LINE L1 -6 6576 4489 5 1737 3208 72 0 0 chrX 151053046 151053476 -15596820 + L1Md_F2 LINE L1 4072 4501 -1382 5 1737 4612 218 24 9 chrX 151053480 151054542 -15595754 + MYSERV6-int LTR ERVK 2823 3899 -5060 4 1737 611 194 39 6 chrX 151054664 151054820 -15595476 - L1_Mur2 LINE L1 -4287 1590 1430 4 1737 4066 242 57 15 chrX 151055391 151056410 -15593886 - Lx5 LINE L1 -4 7046 5985 5 1737 3693 154 38 11 chrX 151056412 151057196 -15593100 + L1_Mur2 LINE L1 2974 3778 -2099 5 1737 211 311 0 32 chrX 151057308 151057344 -15592952 + polypyrimidine Low_complexity Low_complexity 57 91 0 5 1737 324 0 0 0 chrX 151057344 151057380 -15592916 + (TTCCC)n Simple_repeat Simple_repeat 2 37 0 5 1737 1124 100 0 16 chrX 151057380 151057563 -15592733 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 5 1737 211 311 0 32 chrX 151057563 151057618 -15592678 + polypyrimidine Low_complexity Low_complexity 3 56 0 5 1737 740 285 0 27 chrX 151058144 151058364 -15591932 + Lx5 LINE L1 6834 7047 -3 5 1737 507 45 0 0 chrX 151058547 151058613 -15591683 + (TC)n Simple_repeat Simple_repeat 1 66 0 5 1737 1132 310 19 73 chrX 151058631 151059137 -15591159 - RMER1A Other Other -530 536 58 5 1737 1488 269 0 3 chrX 151059159 151059532 -15590764 - MERVL_2A-int LTR ERVL -4022 1739 1368 6 1737 2006 150 48 5 chrX 151059532 151059634 -15590662 - Lx2 LINE L1 -1020 5977 5876 6 1737 462 18 0 0 chrX 151059634 151059689 -15590607 + (TG)n Simple_repeat Simple_repeat 1 55 0 6 1737 2775 160 28 21 chrX 151059689 151060211 -15590085 - Lx2 LINE L1 -1122 5875 5354 6 1737 3496 34 0 0 chrX 151060211 151060620 -15589676 - L1Md_F3 LINE L1 -17 6567 6159 6 1737 2775 172 7 38 chrX 151060620 151060680 -15589616 - Lx2 LINE L1 -530 5353 5294 6 1737 342 97 42 0 chrX 151060680 151060752 -15589544 - L1_Mus3 LINE L1 -5 6633 6559 6 1737 1079 188 131 43 chrX 151060753 151061058 -15589238 + IAPEY3_LTR LTR ERVK 1 332 0 6 1737 1483 137 12 7 chrX 151061058 151061401 -15588895 + MMERVK10C-int LTR ERVK 1 422 -7159 6 1737 722 128 8 0 chrX 151061504 151061629 -15588667 + MMERVK10C-int LTR ERVK 708 833 -6748 6 1737 375 209 81 0 chrX 151061637 151061723 -15588573 + IAPEY3-int LTR ERVK 334 426 -4980 6 1737 267 241 50 12 chrX 151061826 151061906 -15588390 + IAPEY3-int LTR ERVK 733 815 -4591 6 1737 250 255 50 20 chrX 151062016 151062116 -15588180 + IAPEY3-int LTR ERVK 1462 1564 -6017 6 1737 285 160 0 0 chrX 151062135 151062185 -15588111 + IAP-d-int LTR ERVK 447 496 -6046 6 1737 1235 147 107 0 chrX 151062192 151062417 -15587879 + IAP-d-int LTR ERVK 5007 5255 -1287 6 1737 1538 131 57 26 chrX 151062417 151062744 -15587552 + IAPEY3-int LTR ERVK 6965 7338 -342 6 1737 1235 196 58 18 chrX 151062761 151063104 -15587192 + IAPEz-int LTR ERVK 6125 6481 0 6 1737 245 96 365 0 chrX 151063104 151063156 -15587140 + IAPEY_LTR LTR ERVK 55 125 -260 6 1737 756 214 25 28 chrX 151063152 151063348 -15586948 + RLTR10B LTR ERVK 117 305 -6 7 1737 3046 110 13 0 chrX 151063352 151063806 -15586490 - L1_Mus3 LINE L1 -77 6561 6102 7 1737 234 155 27 53 chrX 151063803 151063878 -15586418 - Lx2 LINE L1 -580 5300 5228 6 1737 6617 130 32 10 chrX 151063878 151065533 -15584763 - L1VL4 LINE L1 -1552 2007 203 7 1737 1557 227 24 83 chrX 151065805 151066513 -15583783 + L1_Mur3 LINE L1 1838 2443 -3437 7 1737 223 83 28 0 chrX 151066685 151066721 -15583575 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 7 1737 244 25 24 48 chrX 151066731 151066773 -15583523 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 7 1737 730 221 0 0 chrX 151066860 151067005 -15583291 + MERVL_2A-int LTR ERVL 2324 2468 -3293 7 1737 459 35 0 0 chrX 151067005 151067062 -15583234 + (TC)n Simple_repeat Simple_repeat 1 57 0 7 1737 900 325 29 35 chrX 151067894 151068235 -15582061 + MTE2b LTR MaLR 28 366 -13 7 1737 930 357 24 13 chrX 151068248 151068705 -15581591 + MTE2b-int LTR MaLR 1 462 -1118 7 1737 459 0 0 0 chrX 151068879 151068930 -15581366 + (TC)n Simple_repeat Simple_repeat 1 51 0 7 1737 391 337 38 60 chrX 151068933 151069198 -15581098 - MT2B LTR ERVL -60 541 283 8 1737 346 309 0 31 chrX 151069264 151069391 -15580905 - MT2B LTR ERVL -410 123 1 8 1737 6936 134 2 0 chrX 151071386 151072583 -15577713 + L1_Mm LINE L1 3051 4250 -1633 8 1737 284 275 145 21 chrX 151075294 151075439 -15574857 - RMER5 LTR ERV1 -259 275 113 8 1737 215 200 36 0 chrX 151075851 151075906 -15574390 + (CAAA)n Simple_repeat Simple_repeat 4 60 0 8 1737 318 287 83 54 chrX 151075958 151076241 -15574055 - L1_Mur3 LINE L1 -2080 3800 3507 8 1737 703 306 36 31 chrX 151076252 151076440 -15573856 - L1_Rod LINE L1 -2410 3437 3248 8 1737 855 80 0 0 chrX 151076440 151076565 -15573731 + (TC)n Simple_repeat Simple_repeat 2 126 0 8 1737 703 306 36 31 chrX 151076565 151076963 -15573333 - L1_Rod LINE L1 -2600 3247 2848 8 1737 337 279 38 6 chrX 151076973 151077132 -15573164 - L1_Rod LINE L1 -3217 2630 2467 8 1737 607 215 142 0 chrX 151077189 151077240 -15573056 - Lx9 LINE L1 -10 7634 7570 8 1737 794 20 10 0 chrX 151077240 151077340 -15572956 + (TAGA)n Simple_repeat Simple_repeat 2 102 0 8 1737 607 215 142 0 chrX 151077340 151077534 -15572762 - Lx9 LINE L1 -75 7569 7355 8 1737 3302 94 0 2 chrX 151077538 151077986 -15572310 + L1_Mus1 LINE L1 6121 6567 0 8 1737 463 299 70 94 chrX 151078105 151078349 -15571947 + MTC-int LTR MaLR 803 1040 -218 9 1737 183 42 0 0 chrX 151078370 151078394 -15571902 + (ATG)n Simple_repeat Simple_repeat 3 26 0 9 1737 531 168 43 34 chrX 151078555 151078672 -15571624 - Lx4B LINE L1 -76 6982 6865 9 1737 282 180 16 0 chrX 151078671 151078732 -15571564 - Lx4B LINE L1 -464 6594 6533 9 1737 5364 214 30 3 chrX 151078752 151079647 -15570649 + Lx2B LINE L1 5474 6386 -614 9 1737 486 0 0 0 chrX 151079647 151079701 -15570595 + (TG)n Simple_repeat Simple_repeat 1 54 0 9 1737 5364 225 52 6 chrX 151079701 151080263 -15570033 + Lx2B LINE L1 6387 6989 -11 9 1737 4834 213 24 6 chrX 151080260 151081764 -15568532 + Lx4B LINE L1 5230 6768 -290 9 1737 812 201 27 11 chrX 151081768 151081954 -15568342 + Lx4B LINE L1 6865 7053 -5 9 1737 286 348 105 71 chrX 151081973 151082239 -15568057 - MTC LTR MaLR -141 280 6 9 1737 3426 72 8 21 chrX 151082246 151082732 -15567564 + L1_Mus3 LINE L1 6164 6638 0 9 1737 1175 68 7 0 chrX 151082733 151082879 -15567417 + B1_Mus2 SINE Alu 1 147 0 9 1737 3426 72 8 21 chrX 151082879 151082894 -15567402 + L1_Mus3 LINE L1 6624 6638 0 9 1737 245 29 0 29 chrX 151082899 151082934 -15567362 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 9 1737 425 19 0 18 chrX 151083405 151083460 -15566836 + (TC)n Simple_repeat Simple_repeat 2 55 0 1 1737 1259 34 0 0 chrX 151083469 151083615 -15566681 - B1_Mm SINE Alu 0 147 2 1 1737 221 362 0 0 chrX 151083988 151084057 -15566239 - ID_B1 SINE B4 -75 149 81 1 1737 695 231 174 0 chrX 151085056 151085251 -15565045 - RMER1B Other Other -64 1002 774 1 1737 475 285 71 49 chrX 151085412 151085837 -15564459 + L1_Mur3 LINE L1 1940 2373 -3507 1 1737 32264 78 16 6 chrX 151085846 151092262 -15558034 - L1Md_F2 LINE L1 -2 6580 98 1 1737 975 276 37 52 chrX 151092298 151092637 -15557659 + L1_Mur3 LINE L1 2398 2741 -3139 1 1737 1435 51 40 0 chrX 151092637 151092814 -15557482 + B2_Mm2 SINE B2 2 185 -10 1 1737 975 276 37 52 chrX 151092814 151093035 -15557261 + L1_Mur3 LINE L1 2742 2950 -2930 1 1737 368 187 4 48 chrX 151093360 151093460 -15556836 + B1_Mur4 SINE Alu 50 150 0 1 1737 453 36 0 0 chrX 151094207 151094262 -15556034 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1737 408 20 0 0 chrX 151094262 151094310 -15555986 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 1737 270 250 10 50 chrX 151095610 151095711 -15554585 + GA-rich Low_complexity Low_complexity 2 98 0 1 1737 24 53 0 0 chrX 151096168 151096206 -15554090 + AT_rich Low_complexity Low_complexity 1 38 0 1 1737 205 222 29 48 chrX 151096279 151096383 -15553913 + A-rich Low_complexity Low_complexity 4 105 0 1 1737 248 263 40 0 chrX 151096424 151096500 -15553796 - Lx7 LINE L1 -411 7285 7207 1 1737 1180 260 30 48 chrX 151096586 151096990 -15553306 - Lx6 LINE L1 -160 7536 6880 1 1737 516 156 0 0 chrX 151096994 151097084 -15553212 + CT-rich Low_complexity Low_complexity 1 90 0 1 1737 860 235 65 24 chrX 151097084 151097376 -15552920 - Lx6 LINE L1 -566 6894 6591 1 1737 938 202 11 58 chrX 151097392 151097690 -15552606 + Lx6 LINE L1 5682 5973 -1085 1 1737 1301 270 48 68 chrX 151097934 151098539 -15551757 - RMER19A LTR ERVK 0 737 1 1 1737 3094 75 5 5 chrX 151098749 151099167 -15551129 - BGLII LTR ERVK 0 421 4 1 1737 23 54 0 0 chrX 151099501 151099538 -15550758 + AT_rich Low_complexity Low_complexity 1 37 0 1 1737 2171 263 83 26 chrX 151099538 151100079 -15550217 - Lx7 LINE L1 -1 7695 7114 1 1737 1379 226 21 39 chrX 151100079 151100466 -15549830 + RLTR14 LTR ERV1 1 380 -2 1 1737 2171 263 83 26 chrX 151100466 151100800 -15549496 - Lx7 LINE L1 -583 7113 6770 1 1737 6712 99 10 1 chrX 151101048 151102677 -15547619 + L1_Mus1 LINE L1 4923 6565 -2 1 1737 856 288 5 0 chrX 151102703 151102908 -15547388 - B3 SINE B2 -6 210 5 1 1737 282 29 0 0 chrX 151103286 151103321 -15546975 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1737 231 189 0 0 chrX 151103397 151103422 -15546874 + A-rich Low_complexity Low_complexity 1 25 0 1 1737 1149 75 0 0 chrX 151103422 151103568 -15546728 + B1_Mus2 SINE Alu 2 147 0 1 1737 231 189 0 0 chrX 151103568 151103595 -15546701 + A-rich Low_complexity Low_complexity 26 52 0 1 1737 520 305 109 31 chrX 151103915 151104106 -15546190 - Charlie12 DNA MER1_type -16 2857 2652 1 1737 875 135 0 0 chrX 151104106 151104239 -15546057 + B1_Mus1 SINE Alu 1 133 -15 1 1737 791 157 8 16 chrX 151104212 151104341 -15545955 + RLTR20B3 LTR ERVK 450 577 0 1 1737 209 270 310 0 chrX 151104618 151104718 -15545578 - MIRc SINE MIR -117 151 21 1 1737 539 224 0 0 chrX 151105621 151105719 -15544577 + B1_Mur2 SINE Alu 1 98 -51 1 1737 260 282 42 0 chrX 151105716 151105787 -15544509 - MER58B DNA MER1_type -25 316 243 1 1737 228 162 0 0 chrX 151105791 151105828 -15544468 + ID_B1 SINE B4 181 217 -7 1 1737 1759 174 29 24 chrX 151106343 151106370 -15543926 + MusHAL1 LINE L1 1561 1587 -1125 1 1737 3756 158 40 10 chrX 151106370 151107042 -15543254 - RLTR17 LTR ERVK 0 692 1 1 1737 1759 174 29 24 chrX 151107042 151107426 -15542870 + MusHAL1 LINE L1 1588 1974 -738 1 1737 983 118 15 0 chrX 151107452 151107587 -15542709 - B1_Mus2 SINE Alu -10 137 1 1 1737 3471 123 41 19 chrX 151107660 151108242 -15542054 - RLTR13D6 LTR ERVK -307 595 1 1 1737 5749 153 29 36 chrX 151108242 151109476 -15540820 - L1_Mur1 LINE L1 -2946 2940 1715 1 1737 258 319 0 14 chrX 151110049 151110122 -15540174 + tRNA-Ala-GCG tRNA tRNA 2 73 -2 1 1737 198 0 0 0 chrX 151110294 151110316 -15539980 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 1 1737 347 305 173 11 chrX 151110976 151111155 -15539141 - MLT1D LTR MaLR -37 468 261 1 1737 326 235 58 12 chrX 151111214 151111300 -15538996 - MLT1D LTR MaLR -343 124 35 1 1737 227 289 11 43 chrX 151112255 151112349 -15537947 + MIRc SINE MIR 99 189 -79 1 1737 477 217 16 57 chrX 151112364 151112486 -15537810 - PB1D10 SINE Alu 0 117 1 1 1737 1232 84 0 11 chrX 151112669 151112849 -15537447 + (GAAAA)n Simple_repeat Simple_repeat 3 180 0 1 1737 696 247 38 19 chrX 151112959 151113116 -15537180 - B3A SINE B2 -38 160 1 1 1737 972 302 46 23 chrX 151113479 151113781 -15536515 + MER2 DNA MER2_type 36 344 -1 1 1737 21 71 0 0 chrX 151113864 151113906 -15536390 + AT_rich Low_complexity Low_complexity 1 42 0 1 1737 207 0 0 0 chrX 151114112 151114135 -15536161 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1 1737 383 231 13 13 chrX 151114156 151114235 -15536061 + ID_B1 SINE B4 134 212 -12 1 1737 528 30 0 0 chrX 151114236 151114302 -15535994 + (TAAAA)n Simple_repeat Simple_repeat 4 69 0 1 1737 382 249 56 0 chrX 151114312 151114414 -15535882 + B1_Mus1 SINE Alu 1 108 -12 1 1737 261 0 0 0 chrX 151114416 151114445 -15535851 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 1 1737 301 385 39 0 chrX 151115260 151115364 -15534932 - PB1D10 SINE Alu -8 109 2 1 1737 263 337 59 53 chrX 151116448 151116737 -15533559 - MTE2a LTR MaLR 0 379 84 1 1737 297 242 0 0 chrX 151117162 151117224 -15533072 + MER20 DNA MER1_type 2 63 -156 1 1737 3761 198 67 69 chrX 151117336 151118229 -15532067 - MurERV4_19-int LTR ERVK -138 5642 4874 1 1737 479 31 15 0 chrX 151118229 151118294 -15532002 + (TTG)n Simple_repeat Simple_repeat 1 66 0 1 1737 3761 196 68 73 chrX 151118294 151118663 -15531633 - MurERV4_19-int LTR ERVK -907 4873 4462 1 1737 726 201 47 59 chrX 151118663 151118832 -15531464 - RMER19B LTR ERVK -425 477 311 1 1737 255 338 71 29 chrX 151119095 151119235 -15531061 - MTE-int LTR MaLR -629 951 806 1 1737 3028 42 0 0 chrX 151119523 151119877 -15530419 + IAPEY2_LTR LTR ERVK 1 354 -3 1 1737 694 147 49 49 chrX 151119877 151120041 -15530255 + IAPLTR4_I LTR ERVK 17 180 -1290 1 1737 8232 131 30 38 chrX 151120040 151121511 -15528785 + IAPEY3-int LTR ERVK 524 1982 -5698 1 1737 3107 62 34 0 chrX 151121506 151121924 -15528372 + IAPEY3-int LTR ERVK 2258 2689 -4991 1 1737 422 85 0 0 chrX 151121917 151121976 -15528320 + IAPEY3-int LTR ERVK 4852 4910 -2770 1 1737 3193 116 15 29 chrX 151121976 151122709 -15527587 + IAPEY3-int LTR ERVK 6907 7581 0 1 1737 3029 48 0 0 chrX 151122709 151123066 -15527230 + IAPEY2_LTR LTR ERVK 1 357 0 1 1737 727 331 59 7 chrX 151124008 151124315 -15525981 + MTD LTR MaLR 6 328 -91 1 1738 2893 58 45 0 chrX 151126160 151126539 -15523757 - MTA_Mm LTR MaLR 0 396 1 1 1738 8575 64 2 4 chrX 151126541 151127639 -15522657 - MTA_Mm-int LTR MaLR -2 1096 1 1 1738 3233 51 5 0 chrX 151127639 151128033 -15522263 - MTA_Mm LTR MaLR 0 396 1 1 1738 359 298 47 47 chrX 151128413 151128561 -15521735 - RLTR28B LTR ERVL -286 195 48 1 1738 3458 140 137 98 chrX 151128678 151129532 -15520764 + RMER17D LTR ERVK 1 887 -2 1 1738 693 168 126 48 chrX 151129537 151129673 -15520623 + RMER17A-int LTR ERVK 3 134 -1594 1 1738 867 20 0 0 chrX 151129673 151129774 -15520522 + (TC)n Simple_repeat Simple_repeat 1 101 0 1 1738 693 168 126 48 chrX 151129774 151129843 -15520453 + RMER17A-int LTR ERVK 135 223 -1505 1 1738 263 107 35 35 chrX 151129951 151130009 -15520287 + RMER17A-int LTR ERVK 219 276 -1452 1 1738 14245 153 27 13 chrX 151130009 151133642 -15516654 - L1_Mus2 LINE L1 -4 6562 2867 1 1738 4766 165 63 14 chrX 151133634 151135199 -15515097 - L1_Mur1 LINE L1 -3898 1988 65 1 1738 1651 203 13 0 chrX 151135395 151135705 -15514591 + MTC LTR MaLR 1 314 -107 1 1738 712 274 75 0 chrX 151135747 151135948 -15514348 + B3 SINE B2 1 216 0 1 1738 486 146 0 0 chrX 151136024 151136106 -15514190 + (GGGA)n Simple_repeat Simple_repeat 4 85 0 1 1738 354 170 0 91 chrX 151136146 151136256 -15514040 - Lx LINE L1 -6 6648 6549 1 1738 7228 147 31 9 chrX 151136252 151137774 -15512522 - L1_Mus4 LINE L1 -1 6635 5054 1 1738 4933 135 58 8 chrX 151137774 151138619 -15511677 - RMER17D LTR ERVK -2 887 1 1 1738 7228 175 41 17 chrX 151138619 151139373 -15510923 - L1_Mus4 LINE L1 -830 5053 4296 1 1738 408 349 10 20 chrX 151139933 151140210 -15510086 + MTD LTR MaLR 13 327 -92 1 1738 3523 148 38 16 chrX 151140958 151141569 -15508727 - Lx LINE L1 -7 6647 6024 1 1738 4928 192 22 3 chrX 151141590 151142530 -15507766 + RMER17B LTR ERVK 1 958 0 1 1738 234 361 62 31 chrX 151142532 151142692 -15507604 - MTE-int LTR MaLR -591 989 825 1 1738 587 368 46 3 chrX 151142723 151143007 -15507289 + MTC LTR MaLR 15 310 -111 1 1738 632 368 13 22 chrX 151144371 151144688 -15505608 + MTC LTR MaLR 18 331 -90 1 1738 281 281 37 46 chrX 151145611 151145719 -15504577 + MTC LTR MaLR 3 109 -312 1 1738 611 92 11 0 chrX 151145818 151145905 -15504391 + U6 snRNA snRNA 17 104 -3 1 1738 514 172 9 0 chrX 151145910 151146026 -15504270 + L1Md_F LINE L1 757 873 -5646 1 1738 1619 150 199 3 chrX 151146029 151146376 -15503920 + RLTR9F LTR ERVK 1 415 0 1 1738 1214 92 22 5 chrX 151146460 151146645 -15503651 + L1_Mm LINE L1 5564 5751 -132 1 1738 1612 132 18 70 chrX 151146645 151146972 -15503324 + RLTRETN_Mm LTR ERVK 1 310 -12 1 1738 2391 160 158 53 chrX 151146972 151147540 -15502756 + RLTR5_Mm LTR ERV1 1 628 0 1 1738 2664 165 154 20 chrX 151147540 151148177 -15502119 + MURVY-int LTR ERV1 1 722 -6730 1 1738 899 184 75 0 chrX 151148232 151148444 -15501852 + MURVY-int LTR ERV1 827 1054 -6398 1 1738 407 189 0 62 chrX 151148449 151148562 -15501734 + MMVL30-int LTR ERV1 657 762 -2537 1 1738 2322 99 8 47 chrX 151148764 151149144 -15501152 + MMVL30-int LTR ERV1 1103 1467 -2231 1 1738 508 153 6 127 chrX 151149178 151149335 -15500961 + MMVL30-int LTR ERV1 993 1130 -2169 1 1738 381 70 0 0 chrX 151149328 151149385 -15500911 + MMVL30-int LTR ERV1 1455 1511 -2187 1 1738 15438 76 16 11 chrX 151149661 151151850 -15498446 + MMVL30-int LTR ERV1 1501 3698 0 1 1738 3323 159 17 40 chrX 151151850 151152493 -15497803 + RLTR5_Mm LTR ERV1 1 628 0 1 1738 8336 93 5 49 chrX 151152510 151152814 -15497482 + ETnERV2-int LTR ERVK 2 270 -4574 1 1738 213 65 0 0 chrX 151152814 151152845 -15497451 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1738 8336 93 5 49 chrX 151152845 151153905 -15496391 + ETnERV2-int LTR ERVK 271 1305 -3539 1 1738 13836 130 45 19 chrX 151153919 151157788 -15492508 + ETnERV2-int LTR ERVK 1730 6260 -1146 1 1738 351 0 0 0 chrX 151157788 151157827 -15492469 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1738 13836 142 33 30 chrX 151157827 151159060 -15491236 + ETnERV2-int LTR ERVK 6261 7298 -108 1 1738 1485 178 15 65 chrX 151159060 151159397 -15490899 + RLTRETN_Mm LTR ERVK 1 320 -2 1 1738 6366 67 15 0 chrX 151159400 151160223 -15490073 + L1Md_F2 LINE L1 5747 6581 -1 1 1738 893 157 26 42 chrX 151160428 151160453 -15489843 + ETnERV2-int LTR ERVK 2075 2099 -5145 1 1738 374 39 19 0 chrX 151160453 151160505 -15489791 + (TAAAA)n Simple_repeat Simple_repeat 4 56 0 1 1738 4817 113 66 75 chrX 151160505 151161516 -15488780 + ETnERV2-int LTR ERVK 1083 2085 -5321 1 1738 3297 112 42 7 chrX 151161543 151162094 -15488202 + ETnERV2-int LTR ERVK 2498 3067 -4339 1 1738 12083 124 19 3 chrX 151162094 151164890 -15485406 + L1_Mus3 LINE L1 3808 6638 0 1 1738 4142 173 52 86 chrX 151164890 151165360 -15484936 - MurERV4_19-int LTR ERVK -148 5632 5201 2 1738 369 0 0 0 chrX 151165360 151165401 -15484895 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1738 4142 173 52 86 chrX 151165401 151166142 -15484154 - MurERV4_19-int LTR ERVK -580 5200 4462 2 1738 572 241 54 60 chrX 151166142 151166310 -15483986 - RMER19B LTR ERVK -425 477 311 2 1738 667 354 25 12 chrX 151166714 151167037 -15483259 + MTD LTR MaLR 1 327 -92 2 1738 671 317 69 57 chrX 151167979 151168297 -15481999 + MTD LTR MaLR 6 327 -92 2 1738 253 263 112 101 chrX 151168541 151168710 -15481586 - RLTR13D3 LTR ERVK 0 1114 944 2 1738 881 151 7 0 chrX 151168728 151168874 -15481422 + B1_Mus1 SINE Alu 2 148 0 2 1738 552 120 0 0 chrX 151168874 151168974 -15481322 + (CAAAC)n Simple_repeat Simple_repeat 5 104 0 2 1738 254 105 0 0 chrX 151169243 151169281 -15481015 - B2_Mm2 SINE B2 -157 38 1 2 1738 21 0 0 0 chrX 151169289 151169310 -15480986 + AT_rich Low_complexity Low_complexity 1 21 0 2 1738 5669 45 3 1 chrX 151169525 151170218 -15480078 + L1Md_F2 LINE L1 5875 6568 -14 2 1738 188 152 0 42 chrX 151170743 151170791 -15479505 + CT-rich Low_complexity Low_complexity 3 48 0 2 1738 6203 155 24 1 chrX 151171324 151172491 -15477805 - Lx LINE L1 -7 6647 5455 2 1738 458 273 38 8 chrX 151174341 151174474 -15475822 - RLTR28B LTR ERVL -304 177 41 2 1738 1050 268 14 76 chrX 151174490 151174846 -15475450 - ORR1B2 LTR MaLR -29 338 5 2 1738 3103 59 8 0 chrX 151175182 151175574 -15474722 + MTA_Mm LTR MaLR 2 396 0 2 1738 8262 69 12 5 chrX 151175574 151176664 -15473632 + MTA_Mm-int LTR MaLR 1 1098 0 2 1738 3204 51 5 0 chrX 151176664 151177058 -15473238 + MTA_Mm LTR MaLR 1 396 0 2 1738 535 363 41 20 chrX 151178775 151179070 -15471226 - ORR1B1-int LTR MaLR -341 1239 939 2 1738 631 194 7 110 chrX 151179189 151179334 -15470962 - MT2B LTR ERVL -315 286 157 2 1738 2567 195 35 2 chrX 151179327 151179842 -15470454 - ORR1B1-int LTR MaLR -1403 560 29 2 1738 1393 213 23 14 chrX 151180123 151180476 -15469820 + Lx LINE L1 6294 6649 -5 2 1738 1336 239 110 20 chrX 151180511 151180865 -15469431 - ORR1B1 LTR MaLR -8 386 1 2 1738 3130 183 8 51 chrX 151180919 151181114 -15469182 - MT2B LTR ERVL 0 601 411 2 1738 2611 138 0 0 chrX 151181114 151181514 -15468782 - MTB LTR MaLR 0 400 1 2 1738 3130 183 8 51 chrX 151181514 151181946 -15468350 - MT2B LTR ERVL -191 410 1 2 1738 494 346 49 28 chrX 151182609 151182856 -15467440 - MTE-int LTR MaLR -494 1086 835 2 1738 549 350 60 7 chrX 151182897 151183196 -15467100 + MTC LTR MaLR 15 329 -92 2 1738 368 330 164 4 chrX 151184132 151184381 -15465915 + MTD LTR MaLR 1 289 -130 2 1738 231 366 63 38 chrX 151185215 151185374 -15464922 - MTE-int LTR MaLR -591 989 827 2 1738 579 362 16 4 chrX 151185434 151185681 -15464615 + MTD LTR MaLR 53 302 -117 2 1738 703 343 31 12 chrX 151186616 151186935 -15463361 + MTD LTR MaLR 3 327 -92 2 1738 1873 252 78 58 chrX 151187519 151188160 -15462136 - RMER19B LTR ERVK -236 666 88 2 1738 548 180 47 57 chrX 151188229 151188535 -15461761 - MurERV4_19-int LTR ERVK -92 5688 5425 2 1738 3176 55 3 0 chrX 151188535 151188919 -15461377 + IAPEY_LTR LTR ERVK 1 385 0 2 1738 544 184 53 40 chrX 151188919 151189416 -15460880 - MurERV4_19-int LTR ERVK -130 5650 5425 2 1738 614 170 51 48 chrX 151189397 151189721 -15460575 - MurERV4_19-int LTR ERVK -119 5661 5425 2 1738 533 202 63 35 chrX 151189698 151190008 -15460288 - MurERV4_19-int LTR ERVK -137 5643 5425 2 1738 542 175 63 37 chrX 151190121 151190783 -15459513 - MurERV4_19-int LTR ERVK -101 5679 5415 2 1738 775 163 80 42 chrX 151190815 151191769 -15458527 - MurERV4_19-int LTR ERVK -119 5661 5405 2 1738 3755 98 2 4 chrX 151191786 151192309 -15457987 - L1_Mus1 LINE L1 -2 6565 6044 2 1738 490 192 91 32 chrX 151192312 151192605 -15457691 - MurERV4_19-int LTR ERVK -119 5661 5407 2 1738 3493 186 54 77 chrX 151192588 151193561 -15456735 - MurERV4_19-int LTR ERVK -124 5656 4896 2 1738 180 0 0 0 chrX 151193561 151193581 -15456715 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1738 3493 191 40 99 chrX 151193581 151193836 -15456460 - MurERV4_19-int LTR ERVK -885 4895 4633 2 1738 31856 80 6 6 chrX 151193837 151198980 -15451316 + L1Md_F2 LINE L1 487 5585 -298 2 1738 7929 54 5 0 chrX 151198981 151199970 -15450326 + L1Md_F2 LINE L1 5587 6580 -2 2 1738 830 209 6 6 chrX 151199975 151200158 -15450138 - MurERV4_19-int LTR ERVK -1136 4644 4462 2 1738 620 229 48 60 chrX 151200158 151200325 -15449971 - RMER19B LTR ERVK -425 477 313 2 1738 647 355 59 0 chrX 151201957 151202261 -15448035 + MTD LTR MaLR 6 327 -92 2 1738 1072 162 11 0 chrX 151203366 151203551 -15446745 + B2_Mm1t SINE B2 2 188 -5 2 1738 1129 253 11 86 chrX 151204794 151205144 -15445152 - ORR1B2 LTR MaLR -41 326 3 2 1738 5260 192 42 4 chrX 151205993 151207176 -15443120 - L1_Mur1 LINE L1 -1790 4096 2869 2 1738 3266 139 22 2 chrX 151207151 151207743 -15442553 - L1_Mur1 LINE L1 -3875 2011 1408 2 1738 561 72 0 0 chrX 151207932 151208015 -15442281 + (TG)n Simple_repeat Simple_repeat 1 83 0 2 1738 233 193 52 17 chrX 151208481 151208539 -15441757 - B1F SINE Alu -1 148 89 2 1738 3030 99 0 7 chrX 151208558 151208994 -15441302 - L1_Mus2 LINE L1 -1 6566 6134 2 1738 12491 47 2 0 chrX 151210035 151212265 -15438031 - L1Md_F3 LINE L1 -14 6570 4338 2 1738 9113 119 13 0 chrX 151212583 151212849 -15437447 - L1_Mus2 LINE L1 -435 6131 5860 2 1738 450 0 0 0 chrX 151212849 151212899 -15437397 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1738 9113 128 11 3 chrX 151212899 151214310 -15435986 - L1_Mus2 LINE L1 -18 5865 4443 2 1738 4577 98 3 9 chrX 151214312 151214961 -15435335 - L1_Mus1 LINE L1 -52 6515 5871 2 1738 238 398 129 5 chrX 151215000 151215217 -15435079 - MTE-int LTR MaLR -530 1050 807 2 1738 495 292 19 7 chrX 151215217 151215372 -15434924 + MTD LTR MaLR 1 157 -262 2 1738 1003 208 81 110 chrX 151215457 151215792 -15434504 - ORR1A4 LTR MaLR -2 327 3 2 1738 885 234 14 0 chrX 151215929 151216151 -15434145 + RMER4B LTR ERVK 1 225 -360 2 1738 447 301 14 7 chrX 151216181 151216325 -15433971 - Lx5 LINE L1 -685 6365 6221 2 1738 197 65 32 0 chrX 151216328 151216359 -15433937 + (TTTTTA)n Simple_repeat Simple_repeat 3 34 0 2 1738 1274 323 53 38 chrX 151217903 151218676 -15431620 + Lx7 LINE L1 5832 6616 -1080 2 1738 3037 183 2 4 chrX 151218678 151219188 -15431108 + L1VL4 LINE L1 1 509 -5793 2 1738 3548 220 17 3 chrX 151219295 151220055 -15430241 + Lx4B LINE L1 5851 6621 -437 2 1738 2184 175 19 4 chrX 151220323 151220788 -15429508 + L1_Mur2 LINE L1 3268 3739 -2138 2 1738 502 386 25 29 chrX 151220984 151221264 -15429032 - MTD LTR MaLR -131 288 10 2 1738 2240 195 36 13 chrX 151221291 151221763 -15428533 + ORR1A4-int LTR MaLR 857 1339 -624 2 1738 7424 109 5 1 chrX 151221763 151223179 -15427117 + L1_Mus3 LINE L1 5205 6626 -12 2 1738 1440 209 11 0 chrX 151223191 151223474 -15426822 + ORR1A4-int LTR MaLR 1299 1584 -379 2 1738 255 389 33 20 chrX 151223982 151224134 -15426162 + MTD LTR MaLR 51 204 -215 2 1738 248 323 10 0 chrX 151224234 151224333 -15425963 + Lx5 LINE L1 6223 6322 -728 2 1738 437 336 13 58 chrX 151224365 151224589 -15425707 + Lx5 LINE L1 6474 6687 -363 2 1738 2270 203 101 13 chrX 151226235 151226770 -15423526 - RMER4B LTR ERVK 0 585 4 2 1738 351 354 16 0 chrX 151226781 151226908 -15423388 - MTD LTR MaLR -92 327 199 2 1738 1468 196 9 93 chrX 151226908 151227251 -15423045 + ORR1A4 LTR MaLR 1 314 -15 2 1738 444 275 8 177 chrX 151227264 151227507 -15422789 - MTC LTR MaLR -219 202 1 2 1738 1161 363 45 22 chrX 151227601 151228229 -15422067 + MTE-int LTR MaLR 925 1566 -14 2 1738 6586 35 0 0 chrX 151230784 151231561 -15418735 - L1Md_A LINE L1 -1 6581 5805 2 1738 5583 22 1 0 chrX 151231561 151232243 -15418053 + L1Md_A LINE L1 5096 5778 -105 2 1738 26 0 0 0 chrX 151232475 151232501 -15417795 + AT_rich Low_complexity Low_complexity 1 26 0 2 1738 528 16 0 0 chrX 151233112 151233173 -15417123 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 1738 255 31 0 0 chrX 151233292 151233324 -15416972 + (GA)n Simple_repeat Simple_repeat 1 32 0 2 1738 431 271 23 62 chrX 151233778 151233955 -15416341 + RNLTR23 LTR ERVK 473 642 0 2 1738 198 0 0 0 chrX 151234189 151234211 -15416085 + (T)n Simple_repeat Simple_repeat 1 22 0 2 1738 1621 37 0 14 chrX 151234312 151234529 -15415767 + L1Md_F3 LINE L1 6347 6560 -24 2 1738 621 0 0 0 chrX 151234529 151234598 -15415698 + (TA)n Simple_repeat Simple_repeat 1 69 0 2 1738 276 125 0 0 chrX 151234880 151234920 -15415376 + SRV_MM-int LTR ERVK 1416 1455 -4712 2 1738 446 174 0 0 chrX 151235075 151235144 -15415152 + tRNA-Lys-AAG tRNA tRNA 2 70 -6 2 1738 2201 269 29 42 chrX 151235258 151236030 -15414266 + RNERVK23-int LTR ERVK 7053 7814 -403 2 1738 432 264 21 124 chrX 151236713 151236899 -15413397 + RNLTR23 LTR ERVK 476 642 0 2 1738 727 358 28 9 chrX 151237834 151238153 -15412143 - MTD LTR MaLR -92 327 3 2 1738 6216 4 0 0 chrX 151239341 151240057 -15410239 - L1Md_A LINE L1 0 6582 5896 2 1738 15939 3 0 0 chrX 151240057 151241920 -15408376 + L1Md_A LINE L1 3941 5803 -80 2 1738 3611 106 4 0 chrX 151242310 151242810 -15407486 + L1_Mus1 LINE L1 6064 6565 -2 2 1738 637 191 86 62 chrX 151242906 151243068 -15407228 + RMER19B LTR ERVK 312 477 -425 2 1738 4744 142 58 66 chrX 151243082 151244243 -15406053 + MurERV4_19-int LTR ERVK 4488 5638 -142 2 1738 657 178 35 45 chrX 151244240 151245266 -15405030 + MurERV4_19-int LTR ERVK 5425 5684 -96 2 1738 2657 228 169 23 chrX 151245344 151246131 -15404165 + RMER19B LTR ERVK 1 902 0 2 1738 763 341 25 6 chrX 151246665 151246981 -15403315 - MTD LTR MaLR -92 327 6 2 1738 5160 83 0 0 chrX 151247747 151248430 -15401866 + L1_Mus1 LINE L1 5885 6567 0 2 1738 684 240 48 53 chrX 151248502 151248691 -15401605 + RMER19B LTR ERVK 290 477 -425 2 1738 4860 183 32 54 chrX 151248691 151250209 -15400087 + MurERV4_19-int LTR ERVK 4462 5661 -119 2 1738 535 161 64 43 chrX 151250260 151250655 -15399641 + MurERV4_19-int LTR ERVK 5425 5650 -130 2 1738 653 149 94 142 chrX 151250671 151251045 -15399251 + MurERV4_19-int LTR ERVK 5425 5780 0 2 1738 2640 199 197 46 chrX 151251045 151251828 -15398468 + RMER19B LTR ERVK 2 902 0 2 1738 592 386 26 6 chrX 151252369 151252682 -15397614 - MTD LTR MaLR -98 321 3 2 1738 292 384 31 6 chrX 151252703 151252863 -15397433 + MTE-int LTR MaLR 826 989 -591 2 1738 1996 148 8 8 chrX 151252956 151253318 -15396978 - IAPLTR1_Mm LTR ERVK -5 362 1 2 1738 19877 19 3 0 chrX 151253318 151255669 -15394627 - IAPEz-int LTR ERVK 0 6481 4123 2 1738 886 73 24 0 chrX 151255671 151255794 -15394502 - IAPEz-int LTR ERVK -2770 4910 4785 2 1738 1716 123 4 4 chrX 151255791 151256053 -15394243 - IAPEz-int LTR ERVK -5183 2497 2236 2 1738 416 57 0 0 chrX 151256052 151256105 -15394191 - IAPEz-int LTR ERVK -5070 1411 1359 2 1738 4158 60 66 22 chrX 151256105 151256744 -15393552 - IAPEz-int LTR ERVK -5819 662 3 2 217 2002 149 8 8 chrX 151256745 151257110 -15393186 - IAPLTR1_Mm LTR ERVK -2 365 1 2 1739 785 314 58 10 chrX 151257657 151257950 -15392346 - MTD LTR MaLR -99 320 14 2 1739 856 336 38 0 chrX 151258887 151259202 -15391094 - MTD LTR MaLR -92 327 1 2 1739 351 0 0 0 chrX 151259276 151259315 -15390981 + (A)n Simple_repeat Simple_repeat 1 39 0 2 1739 2281 70 3 3 chrX 151259560 151259860 -15390436 - MTB LTR MaLR 0 400 101 2 1739 963 282 48 13 chrX 151260497 151260809 -15389487 - MTD LTR MaLR -94 325 3 2 1739 264 376 45 17 chrX 151260843 151261019 -15389277 + MTE-int LTR MaLR 840 1020 -560 3 1739 574 352 40 18 chrX 151261579 151261851 -15388445 + MTE-int LTR MaLR 810 1087 -493 3 1739 186 298 58 35 chrX 151262500 151262587 -15387709 - MIR SINE MIR -90 172 84 3 1739 21 0 0 0 chrX 151262732 151262753 -15387543 + AT_rich Low_complexity Low_complexity 1 21 0 3 1739 2165 200 2 52 chrX 151262908 151263344 -15386952 + MT2B LTR ERVL 1 414 -187 3 1739 689 132 0 6 chrX 151263344 151263458 -15386838 + MTB_Mm LTR MaLR 3 110 -311 3 1739 2464 125 22 42 chrX 151263510 151263918 -15386378 + MTB LTR MaLR 1 400 0 3 1739 1242 134 0 0 chrX 151263918 151264112 -15386184 + MT2B LTR ERVL 408 601 0 3 1739 1069 211 22 26 chrX 151264166 151264395 -15385901 + ORR1B1 LTR MaLR 1 228 -166 3 1739 969 127 51 0 chrX 151264403 151264561 -15385735 + B2_Mm2 SINE B2 24 189 -6 3 1739 721 200 0 0 chrX 151264569 151264699 -15385597 + ORR1B1 LTR MaLR 257 386 -8 3 1739 1769 154 21 21 chrX 151265554 151265879 -15384417 + ORR1A2 LTR MaLR 1 325 -2 3 1739 8411 174 36 24 chrX 151265881 151266538 -15383758 + ORR1A2-int LTR MaLR 1 650 -1142 3 1739 270 0 0 0 chrX 151266538 151266568 -15383728 + (CAA)n Simple_repeat Simple_repeat 2 31 0 3 1739 8411 174 36 24 chrX 151266568 151267680 -15382616 + ORR1A2-int LTR MaLR 651 1791 -1 3 1739 1873 157 6 49 chrX 151267686 151268014 -15382282 + ORR1A2 LTR MaLR 6 319 -8 3 1739 339 113 0 0 chrX 151268633 151268686 -15381610 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 1739 337 312 27 0 chrX 151268692 151268804 -15381492 + (CATG)n Simple_repeat Simple_repeat 1 115 0 3 1739 604 248 7 14 chrX 151268812 151268955 -15381341 + B3A SINE B2 2 143 -55 3 1739 1814 254 20 18 chrX 151269229 151269681 -15380615 - MT2A LTR ERVL 0 533 81 3 1739 606 305 80 0 chrX 151269682 151269882 -15380414 + B3 SINE B2 1 216 0 3 1739 249 274 11 77 chrX 151269898 151269909 -15380387 + MT2B LTR ERVL 155 159 -442 3 1739 635 264 7 0 chrX 151269909 151270053 -15380243 + B1_Mus2 SINE Alu 3 147 0 3 1739 647 25 0 12 chrX 151270054 151270136 -15380160 + (GGAA)n Simple_repeat Simple_repeat 1 81 0 3 1739 286 279 0 75 chrX 151270136 151270220 -15380076 - MT2A LTR ERVL -453 80 3 3 1739 598 211 6 6 chrX 151270443 151270619 -15379677 + CT-rich Low_complexity Low_complexity 1 176 0 3 1739 359 287 29 19 chrX 151270631 151270734 -15379562 - PB1D10 SINE Alu -11 106 3 3 1739 502 250 84 11 chrX 151270885 151271136 -15379160 - L1MA5 LINE L1 -364 5936 5678 3 1739 4440 107 9 24 chrX 151271738 151272857 -15377439 + L1_Mus2 LINE L1 5194 6297 -269 3 1739 3033 85 0 2 chrX 151272857 151273294 -15377002 - L1_Mm LINE L1 -792 5091 4656 3 1739 6255 94 9 2 chrX 151273287 151274202 -15376094 + L1_Mus1 LINE L1 5646 6566 -1 3 1739 841 160 60 98 chrX 151274206 151274722 -15375574 + MurERV4_19-int LTR ERVK 5426 5771 -9 3 1739 1765 262 138 20 chrX 151274730 151274943 -15375353 + RMER19B LTR ERVK 1 232 -670 3 1739 189 74 0 0 chrX 151274943 151274970 -15375326 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1739 1765 262 138 20 chrX 151274970 151275352 -15374944 + RMER19B LTR ERVK 233 665 -237 3 1739 725 103 31 8 chrX 151275611 151275738 -15374558 + BC1_Mm scRNA scRNA 1 130 -22 3 1739 299 12 125 0 chrX 151275738 151275818 -15374478 + (GAAA)n Simple_repeat Simple_repeat 3 92 0 3 1739 315 314 150 30 chrX 151276231 151276501 -15373795 - MTC LTR MaLR -94 325 3 3 1739 748 394 3 0 chrX 151277412 151277727 -15372569 - MTD LTR MaLR -92 327 12 3 1739 419 304 52 12 chrX 151278659 151278942 -15371354 - MTD LTR MaLR -92 327 6 3 1739 482 362 31 17 chrX 151279893 151280180 -15370116 - MTD LTR MaLR -105 314 24 3 1739 615 368 31 11 chrX 151281129 151281415 -15368881 - MTC LTR MaLR -92 329 38 3 1739 624 386 16 3 chrX 151282376 151282688 -15367608 - MTD LTR MaLR -92 327 12 3 1739 5603 167 11 3 chrX 151282879 151283830 -15366466 - RMER17B LTR ERVK 0 958 1 3 1739 2992 183 37 26 chrX 151283847 151284468 -15365828 + Lx LINE L1 6020 6647 -7 3 1739 395 329 23 19 chrX 151285186 151285473 -15364823 - MTC LTR MaLR -92 327 1 3 1739 356 93 0 0 chrX 151286025 151286079 -15364217 + L1_Mus4 LINE L1 4296 4349 -1534 3 1739 6141 141 8 8 chrX 151286073 151287392 -15362904 + L1_Mus4 LINE L1 5312 6633 -3 3 1739 371 160 0 91 chrX 151287388 151287498 -15362798 + Lx LINE L1 6549 6648 -6 3 1739 563 92 11 0 chrX 151287535 151287622 -15362674 + (TTCC)n Simple_repeat Simple_repeat 2 89 0 3 1739 549 244 23 0 chrX 151287623 151287754 -15362542 - B1_Mus2 SINE Alu 0 147 14 3 1739 1321 246 16 3 chrX 151288026 151288336 -15361960 - MTC LTR MaLR -107 314 1 3 1739 217 237 0 0 chrX 151288415 151288474 -15361822 + A-rich Low_complexity Low_complexity 1 59 0 3 1739 2396 228 16 22 chrX 151288550 151289330 -15360966 + L1_Mur1 LINE L1 65 1134 -5850 3 1739 4586 103 3 5 chrX 151289317 151290058 -15360238 + L1_Mur1 LINE L1 1250 1988 -3898 3 1739 9104 189 34 11 chrX 151290049 151290238 -15360058 + L1_Mur1 LINE L1 2860 3046 -2831 3 1739 756 0 0 0 chrX 151290238 151290322 -15359974 + (GAA)n Simple_repeat Simple_repeat 2 85 0 3 1739 9104 189 34 11 chrX 151290322 151290375 -15359921 + L1_Mur1 LINE L1 3047 3124 -2753 3 1739 299 23 0 44 chrX 151290375 151290420 -15359876 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1739 9104 189 34 11 chrX 151290420 151292287 -15358009 + L1_Mur1 LINE L1 3125 5016 -861 3 1739 348 403 0 22 chrX 151292391 151292576 -15357720 + Lx5 LINE L1 6508 6688 -362 3 1739 387 194 61 10 chrX 151294215 151294314 -15355982 - RMER4B LTR ERVK 0 585 482 3 1739 969 173 15 40 chrX 151294292 151294491 -15355805 - RMER4B LTR ERVK -391 194 1 3 1739 292 304 33 57 chrX 151294491 151294606 -15355690 - MTD LTR MaLR -89 330 219 3 1739 1113 246 47 44 chrX 151294617 151294979 -15355317 + ORR1B1 LTR MaLR 19 381 -13 3 1739 368 269 13 0 chrX 151294990 151295068 -15355228 - MTD LTR MaLR -216 203 125 3 1739 301 314 43 43 chrX 151295068 151295231 -15355065 - MTD LTR MaLR -256 163 1 3 1739 1113 366 59 18 chrX 151295282 151295939 -15354357 + MTE-int LTR MaLR 873 1556 -24 3 1739 2747 73 149 108 chrX 151296108 151296599 -15353697 - RLTR1B LTR ERV1 -1 511 1 3 1739 1161 291 25 16 chrX 151297994 151298357 -15351939 + ORR1B1 LTR MaLR 1 366 -28 3 1739 426 292 35 7 chrX 151298378 151298523 -15351773 + RLTR28B LTR ERVL 46 194 -287 3 1739 2782 79 10 32 chrX 151300317 151300722 -15349574 + MTA_Mm LTR MaLR 1 396 0 3 1739 6502 100 6 2 chrX 151300722 151301663 -15348633 + MTA_Mm-int LTR MaLR 1 945 -153 3 1739 1097 135 32 0 chrX 151301659 151301844 -15348452 - B2_Mm1t SINE B2 -1 192 2 3 1739 2654 78 3 0 chrX 151301892 151302237 -15348059 + ORR1A1 LTR MaLR 1 346 0 3 1739 9683 84 154 2 chrX 151302237 151303793 -15346503 + ORR1A1-int LTR MaLR 1 1792 0 3 1739 2743 69 0 0 chrX 151303793 151304139 -15346157 + ORR1A1 LTR MaLR 1 346 0 3 1739 1021 105 0 0 chrX 151304220 151304372 -15345924 - L1_Mus1 LINE L1 -14 6553 6402 3 1739 361 45 0 0 chrX 151304377 151304421 -15345875 + L1Md_F2 LINE L1 5543 5586 -297 3 1739 7683 62 6 4 chrX 151304422 151305402 -15344894 + L1Md_F2 LINE L1 5588 6569 -13 3 1739 1012 101 0 0 chrX 151305414 151305553 -15344743 + B1_Mus2 SINE Alu 1 139 -8 3 1739 347 56 19 0 chrX 151305553 151305607 -15344689 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 3 1739 1062 268 27 22 chrX 151306473 151306877 -15343419 - Lx7 LINE L1 -1553 6143 5738 3 1739 7955 120 24 1 chrX 151307179 151309380 -15340916 + L1VL4 LINE L1 1 2227 -1332 3 1739 252 0 0 0 chrX 151309392 151309420 -15340876 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 3 1739 2527 196 51 20 chrX 151309678 151310538 -15339758 + L1Md_F LINE L1 331 1228 -5332 3 1739 1737 160 14 3 chrX 151310539 151310833 -15339463 + RLTR27 LTR ERVK 1 297 -12 3 1739 273 152 0 0 chrX 151310855 151310901 -15339395 + RLTR10-int LTR ERVK 222 267 -7314 3 1739 602 249 45 45 chrX 151310932 151311130 -15339166 + RLTR10-int LTR ERVK 655 852 -1135 3 1739 210 250 31 15 chrX 151311130 151311195 -15339101 + A-rich Low_complexity Low_complexity 5 70 0 3 1739 393 345 9 35 chrX 151311508 151311856 -15338440 + IAP-d-int LTR ERVK 704 1042 -5500 3 1739 398 340 0 0 chrX 151311987 151312149 -15338147 + MMERVK10C-int LTR ERVK 6908 7069 -512 3 1739 1364 139 31 31 chrX 151312284 151312544 -15337752 + MMERVK10C-int LTR ERVK 7322 7581 0 3 1739 1670 197 13 7 chrX 151312544 151312851 -15337445 + RLTR27 LTR ERVK 1 309 0 3 1739 11471 175 16 81 chrX 151312851 151315398 -15334898 + L1_Mus2 LINE L1 1321 3476 -2407 3 1739 180 0 0 0 chrX 151315398 151315418 -15334878 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 3 1739 11471 148 7 111 chrX 151315418 151316469 -15333827 + L1_Mus2 LINE L1 3471 4518 -2048 3 1739 1974 227 177 69 chrX 151316469 151317283 -15333013 - RLTR13D6 LTR ERVK 0 902 1 3 1739 11471 148 7 111 chrX 151317283 151319334 -15330962 + L1_Mus2 LINE L1 4519 6566 0 3 1739 1587 209 23 5 chrX 151320587 151321013 -15329283 + Lx7 LINE L1 5504 5933 -1763 3 1739 540 154 51 60 chrX 151321027 151321144 -15329152 + B1_Mus2 SINE Alu 32 147 0 3 1739 26 0 0 0 chrX 151321416 151321442 -15328854 + AT_rich Low_complexity Low_complexity 1 26 0 3 1739 285 75 0 0 chrX 151322662 151322702 -15327594 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1739 2849 273 28 18 chrX 151323101 151323896 -15326400 + ORR1C2-int LTR MaLR 564 1366 -4 3 1739 461 265 29 113 chrX 151323900 151324104 -15326192 + ORR1C2 LTR MaLR 1 187 -187 3 1739 329 222 22 0 chrX 151324104 151324194 -15326102 + CT-rich Low_complexity Low_complexity 2 93 0 3 1739 681 189 24 0 chrX 151324241 151324368 -15325928 + ORR1C2 LTR MaLR 255 384 0 3 1739 789 131 0 0 chrX 151324897 151325027 -15325269 + (TTTC)n Simple_repeat Simple_repeat 2 131 0 3 1739 4286 124 3 0 chrX 151325032 151325678 -15324618 - L1_Mus4 LINE L1 -5 6631 5984 3 1739 22 35 0 0 chrX 151325912 151325941 -15324355 + AT_rich Low_complexity Low_complexity 1 29 0 3 1739 887 106 14 0 chrX 151326384 151326525 -15323771 + (TTTC)n Simple_repeat Simple_repeat 2 144 0 3 1739 902 273 29 42 chrX 151326912 151327218 -15323078 + RLTR11A LTR ERVK 223 524 -4 3 1739 193 337 74 32 chrX 151327617 151327712 -15322584 - L2c LINE L2 -4 3383 3285 3 1739 584 229 0 77 chrX 151328593 151328749 -15321547 + B1_Mur2 SINE Alu 1 144 -5 3 1739 1506 199 18 0 chrX 151330490 151330776 -15319520 - MTC LTR MaLR -128 293 3 3 1739 22 35 0 0 chrX 151331325 151331354 -15318942 + AT_rich Low_complexity Low_complexity 1 29 0 3 1739 564 301 15 23 chrX 151331538 151331800 -15318496 - Lx6 LINE L1 -22 7438 7179 3 1739 784 137 8 0 chrX 151331799 151331930 -15318366 - L1_Mm LINE L1 -311 5572 5441 3 1739 9680 183 8 2 chrX 151331960 151334670 -15315626 - L1_Mus4 LINE L1 -7 6629 3903 3 1739 2317 237 40 4 chrX 151334668 151335211 -15315085 + Lx LINE L1 6092 6654 0 3 1739 1238 181 53 0 chrX 151335275 151335541 -15314755 + RMER6C LTR ERVK 1 280 -410 3 1739 2621 125 25 26 chrX 151335544 151336270 -15314026 - RLTR13C1 LTR ERVK -2 981 166 3 1739 635 246 11 5 chrX 151336264 151336448 -15313848 + RMER6C LTR ERVK 455 639 -51 3 1739 243 130 0 0 chrX 151336470 151336516 -15313780 - L1_Mur1 LINE L1 -3280 2606 2561 3 1739 26 0 0 0 chrX 151336589 151336615 -15313681 + AT_rich Low_complexity Low_complexity 1 26 0 3 1739 1731 317 87 20 chrX 151336669 151337516 -15312780 - Lx6 LINE L1 -359 7101 6198 3 1739 874 229 31 35 chrX 151337554 151337812 -15312484 - ORR1A4 LTR MaLR -24 305 49 3 1739 612 281 94 33 chrX 151337842 151338118 -15312178 - Lx6 LINE L1 -1292 6168 5876 3 1739 21 57 0 0 chrX 151338507 151338542 -15311754 + AT_rich Low_complexity Low_complexity 1 35 0 3 1739 1457 126 55 80 chrX 151338557 151338884 -15311412 + RMER17A LTR ERVK 433 751 0 3 1739 11588 78 56 21 chrX 151338884 151340553 -15309743 + RMER17A-int LTR ERVK 1 1728 0 3 1739 3790 144 12 45 chrX 151340553 151340776 -15309520 + RMER17A LTR ERVK 1 218 -533 3 1739 2976 35 0 0 chrX 151340776 151341122 -15309174 - ORR1A0 LTR MaLR 0 346 1 4 1739 3790 144 12 45 chrX 151341122 151341659 -15308637 + RMER17A LTR ERVK 219 736 -15 3 1739 1838 215 36 7 chrX 151341694 151342106 -15308190 - RMER13A LTR ERVK -434 426 3 4 1739 404 342 69 27 chrX 151342110 151342371 -15307925 - Lx8 LINE L1 -76 7397 7126 4 1739 494 291 110 11 chrX 151342543 151342734 -15307562 - B3 SINE B2 -1 215 6 4 1739 650 210 19 0 chrX 151343855 151344012 -15306284 - URR1A DNA MER1_type -9 217 58 4 1739 4300 61 9 0 chrX 151344331 151344875 -15305421 + L1Md_F3 LINE L1 6033 6581 -3 4 1739 227 79 26 0 chrX 151350157 151350195 -15300101 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1739 342 0 0 0 chrX 151350575 151350613 -15299683 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 4 1739 24 0 0 0 chrX 151350682 151350706 -15299590 + AT_rich Low_complexity Low_complexity 1 24 0 4 1739 330 162 0 0 chrX 151351655 151351729 -15298567 + (CCTG)n Simple_repeat Simple_repeat 3 76 0 4 1739 852 233 33 158 chrX 151351938 151352300 -15297996 - MTC LTR MaLR -102 317 1 4 1739 445 324 15 30 chrX 151353054 151353321 -15296975 - Lx6 LINE L1 -19 7441 7179 4 1739 849 127 0 0 chrX 151353320 151353446 -15296850 - L1_Mur1 LINE L1 -311 5575 5450 4 1739 1092 200 4 4 chrX 151353462 151353688 -15296608 - L1_Mm LINE L1 -1755 4128 3903 4 1739 2357 231 40 4 chrX 151353686 151354229 -15296067 + Lx LINE L1 6092 6654 0 4 1739 1406 189 49 41 chrX 151354295 151354567 -15295729 + RMER6C LTR ERVK 1 281 -409 4 1739 5162 138 120 19 chrX 151354567 151355460 -15294836 - RLTR13C1 LTR ERVK 0 983 1 4 1739 1406 202 108 49 chrX 151355460 151355735 -15294561 + RMER6C LTR ERVK 269 591 -165 4 1739 287 122 0 0 chrX 151355772 151355821 -15294475 - L1_Mur1 LINE L1 -3276 2610 2562 4 1739 228 266 16 0 chrX 151355827 151355891 -15294405 + Lx3C LINE L1 6909 6973 -3 4 1739 1929 304 76 32 chrX 151355961 151356832 -15293464 - Lx6 LINE L1 -354 7106 6198 4 1739 850 218 35 46 chrX 151356869 151357129 -15293167 - ORR1A4 LTR MaLR -24 305 49 4 1739 477 329 56 28 chrX 151357155 151357440 -15292856 - Lx6 LINE L1 -1288 6172 5880 4 1739 2882 62 52 0 chrX 151357507 151357876 -15292420 + RLTR10 LTR ERVK 1 388 -2 4 1739 27 49 0 0 chrX 151358201 151358242 -15292054 + AT_rich Low_complexity Low_complexity 1 41 0 4 1739 501 287 0 8 chrX 151361883 151362006 -15288290 - RMER13A LTR ERVK 0 860 739 4 1739 1057 118 28 0 chrX 151361981 151362159 -15288137 - RMER17A LTR ERVK -526 225 43 4 1739 859 281 50 18 chrX 151362163 151362446 -15287850 - RMER13A LTR ERVK -135 725 434 4 1739 4091 120 18 108 chrX 151362457 151363282 -15287014 + RMER17A LTR ERVK 1 751 0 4 1739 11339 83 56 20 chrX 151363282 151364949 -15285347 + RMER17A-int LTR ERVK 1 1727 -1 4 1739 3824 146 28 18 chrX 151364950 151365677 -15284619 + RMER17A LTR ERVK 1 734 -17 4 1739 1857 202 44 7 chrX 151365713 151366122 -15284174 - RMER13A LTR ERVK -434 426 3 4 1739 428 339 69 27 chrX 151366126 151366387 -15283909 - Lx8 LINE L1 -76 7397 7126 4 1739 535 294 102 10 chrX 151366559 151366755 -15283541 - B3 SINE B2 -1 215 2 4 1739 650 210 19 0 chrX 151367879 151368036 -15282260 - URR1A DNA MER1_type -9 217 58 4 1739 4321 57 9 0 chrX 151368355 151368899 -15281397 + L1Md_F3 LINE L1 6033 6581 -3 4 1739 209 83 28 0 chrX 151374166 151374202 -15276094 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1739 252 0 0 0 chrX 151374582 151374610 -15275686 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 4 1739 24 0 0 0 chrX 151374679 151374703 -15275593 + AT_rich Low_complexity Low_complexity 1 24 0 4 1739 363 149 0 0 chrX 151375652 151375726 -15274570 + (CCTG)n Simple_repeat Simple_repeat 3 76 0 4 1739 512 234 9 14 chrX 151375936 151376092 -15274204 - MTC LTR MaLR -102 317 166 4 1739 871 231 23 0 chrX 151376083 151376299 -15273997 - MTC LTR MaLR -200 221 1 4 1739 3603 56 2 0 chrX 151376933 151377377 -15272919 + L1Md_F2 LINE L1 6135 6579 -3 4 1739 481 304 29 44 chrX 151377505 151377780 -15272516 - Lx6 LINE L1 -11 7449 7179 4 1739 735 161 15 0 chrX 151377779 151377909 -15272387 - L1_Mur1 LINE L1 -311 5575 5444 4 1739 1067 210 26 4 chrX 151377901 151378131 -15272165 - L1_Mm LINE L1 -1746 4137 3903 4 1739 2570 208 38 20 chrX 151378129 151378255 -15272041 + Lx LINE L1 6092 6217 -437 4 1739 2900 73 0 0 chrX 151378255 151378610 -15271686 - IAPEY2_LTR LTR ERVK 0 357 3 4 1739 2570 208 38 20 chrX 151378610 151379036 -15271260 + Lx LINE L1 6218 6654 0 4 1739 226 216 39 0 chrX 151379050 151379101 -15271195 - Lx6 LINE L1 -284 7176 7124 4 1739 1348 232 43 65 chrX 151379102 151379374 -15270922 + RMER6C LTR ERVK 1 281 -409 4 1739 4998 147 116 23 chrX 151379374 151380274 -15270022 - RLTR13C1 LTR ERVK 0 983 1 4 1739 1348 216 137 52 chrX 151380274 151380549 -15269747 + RMER6C LTR ERVK 265 591 -165 4 1739 301 207 0 28 chrX 151380550 151380638 -15269658 - L1_Mur1 LINE L1 -3253 2633 2554 4 1739 1939 301 76 32 chrX 151380777 151381648 -15268648 - Lx6 LINE L1 -354 7106 6198 4 1739 835 241 31 31 chrX 151381685 151381942 -15268354 - ORR1A4 LTR MaLR -24 305 49 4 1739 532 298 82 41 chrX 151381959 151382253 -15268043 - Lx6 LINE L1 -1275 6185 5880 4 1739 27 49 0 0 chrX 151382640 151382681 -15267615 + AT_rich Low_complexity Low_complexity 1 41 0 4 1739 981 310 58 31 chrX 151386379 151386795 -15263501 - RMER13A LTR ERVK 0 860 434 4 1739 3828 118 18 74 chrX 151386806 151387586 -15262710 + RMER17A LTR ERVK 1 736 -15 4 1739 1850 204 41 12 chrX 151387621 151388033 -15262263 - RMER13A LTR ERVK -434 426 3 4 217 372 333 77 31 chrX 151388037 151388297 -15261999 - Lx8 LINE L1 -76 7397 7126 4 1740 509 306 108 10 chrX 151388469 151388664 -15261632 - B3 SINE B2 -1 215 2 4 1740 226 229 96 117 chrX 151389455 151389549 -15260747 + Charlie10 DNA MER1_type 1316 1407 -1415 4 1740 680 219 19 0 chrX 151389780 151389940 -15260356 - URR1A DNA MER1_type -6 220 58 4 1740 455 69 14 0 chrX 151395509 151395581 -15254715 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 1740 2848 65 14 3 chrX 151395978 151396333 -15253963 - L1Md_F3 LINE L1 0 6584 6226 4 1740 2772 48 1 0 chrX 151396340 151396753 -15253543 + L1Md_A LINE L1 1140 1553 -4330 4 1740 24 0 0 0 chrX 151396819 151396843 -15253453 + AT_rich Low_complexity Low_complexity 1 24 0 4 1740 228 170 0 0 chrX 151397800 151397853 -15252443 + (CCTG)n Simple_repeat Simple_repeat 4 56 0 4 1740 1387 227 17 0 chrX 151399584 151399879 -15250417 - MTC LTR MaLR -121 300 1 4 1740 25 83 0 0 chrX 151400424 151400484 -15249812 + AT_rich Low_complexity Low_complexity 1 60 0 4 1740 553 308 18 36 chrX 151400629 151400905 -15249391 - Lx6 LINE L1 -11 7449 7179 4 1740 767 177 0 9 chrX 151400904 151401052 -15249244 - L1_Mur1 LINE L1 -641 5599 5450 4 1740 6580 163 8 4 chrX 151401055 151402668 -15247628 - L1_Mus4 LINE L1 -3 6633 5011 4 1740 239 308 28 28 chrX 151403139 151403246 -15247050 + PB1 SINE Alu 3 109 -18 4 1740 528 16 0 0 chrX 151403498 151403559 -15246737 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 1740 185 402 25 41 chrX 151403894 151404016 -15246280 - MER5B DNA MER1_type 0 178 59 4 1740 6009 42 1 0 chrX 151408072 151408859 -15241437 + L1Md_F2 LINE L1 5509 6296 -286 4 1740 5514 185 19 6 chrX 151409475 151410578 -15239718 - L1_Mm LINE L1 -857 5026 3910 4 1740 2413 226 37 4 chrX 151410582 151411127 -15239169 + Lx LINE L1 6092 6654 0 4 1740 1357 226 145 28 chrX 151411192 151411463 -15238833 + RMER6C LTR ERVK 1 280 -410 4 1740 4842 154 141 20 chrX 151411463 151412340 -15237956 - RLTR13C1 LTR ERVK 0 983 1 4 1740 1357 235 113 32 chrX 151412340 151412608 -15237688 + RMER6C LTR ERVK 281 621 -69 4 1740 42 36 0 0 chrX 151412611 151412667 -15237629 + AT_rich Low_complexity Low_complexity 1 56 0 4 1740 288 122 0 0 chrX 151412669 151412718 -15237578 - L1_Mur1 LINE L1 -3276 2610 2562 4 1740 26 0 0 0 chrX 151412791 151412817 -15237479 + AT_rich Low_complexity Low_complexity 1 26 0 4 1740 2021 318 71 24 chrX 151412860 151413733 -15236563 - Lx6 LINE L1 -354 7106 6193 4 1740 569 188 29 29 chrX 151413748 151413885 -15236411 - ORR1A4 LTR MaLR -4 325 189 4 1740 770 71 0 0 chrX 151413893 151413991 -15236305 + U6 snRNA snRNA 10 107 0 4 1740 337 208 0 0 chrX 151413992 151414064 -15236232 + L1Md_F2 LINE L1 358 429 -6190 4 1740 34341 79 18 5 chrX 151414042 151419078 -15231218 + L1Md_F2 LINE L1 379 5589 -297 4 1740 8356 57 3 1 chrX 151419078 151420070 -15230226 + L1Md_F2 LINE L1 5590 6583 -2 4 1740 635 286 77 54 chrX 151423908 151423979 -15226317 - Lx8 LINE L1 -4 7469 7403 4 1740 3365 252 47 14 chrX 151423979 151424808 -15225488 - RMER13A LTR ERVK -2 858 3 4 1740 635 286 77 54 chrX 151424808 151425072 -15225224 - Lx8 LINE L1 -71 7402 7126 4 1740 488 288 118 20 chrX 151425244 151425439 -15224857 - B3 SINE B2 -1 215 2 4 1740 677 231 19 0 chrX 151426539 151426699 -15223597 - URR1A DNA MER1_type -6 220 58 4 1740 665 67 0 0 chrX 151428328 151428417 -15221879 - L1Md_F3 LINE L1 -14 6570 6482 4 1740 405 0 0 0 chrX 151432348 151432393 -15217903 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1740 477 0 0 0 chrX 151432393 151432445 -15217851 + (GA)n Simple_repeat Simple_repeat 2 54 0 4 1740 410 19 37 0 chrX 151432446 151432500 -15217796 + (CATA)n Simple_repeat Simple_repeat 4 59 0 4 1740 269 68 0 22 chrX 151432888 151432933 -15217363 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 1740 7804 46 27 5 chrX 151433103 151434191 -15216105 - L1Md_F3 LINE L1 -1 6583 5472 4 1740 270 195 0 0 chrX 151434670 151434747 -15215549 + (CCTG)n Simple_repeat Simple_repeat 4 80 0 4 1740 1345 231 17 0 chrX 151436557 151436851 -15213445 - MTC LTR MaLR -122 299 1 4 1740 3863 52 0 0 chrX 151437485 151437931 -15212365 + L1Md_F2 LINE L1 6135 6580 -2 4 1740 499 298 22 36 chrX 151438059 151438334 -15211962 - Lx6 LINE L1 -11 7449 7179 4 1740 767 154 15 0 chrX 151438333 151438463 -15211833 - L1_Mur1 LINE L1 -311 5575 5444 4 1740 967 218 47 0 chrX 151438461 151438695 -15211601 - L1_Mm LINE L1 -1736 4147 3903 4 1740 755 187 0 0 chrX 151438693 151438816 -15211480 + Lx LINE L1 6092 6214 -440 4 1740 2994 67 3 11 chrX 151438819 151439179 -15211117 - IAPEY2_LTR LTR ERVK 0 357 1 4 1740 3402 118 16 29 chrX 151439179 151439911 -15210385 - IAPEY3-int LTR ERVK 0 7581 6907 4 1740 493 51 0 0 chrX 151439911 151439970 -15210326 - IAPEY3-int LTR ERVK -2770 4910 4852 4 1740 3496 71 5 0 chrX 151439963 151440399 -15209897 - IAPEY3-int LTR ERVK -4991 2689 2252 4 1740 9365 131 12 37 chrX 151440388 151441884 -15208412 - IAPEY3-int LTR ERVK -5698 1982 524 4 1740 726 140 90 39 chrX 151441883 151442039 -15208257 - IAPLTR4_I LTR ERVK -1290 180 17 4 1740 3103 57 0 0 chrX 151442039 151442393 -15207903 - IAPEY2_LTR LTR ERVK -3 354 1 4 1740 1750 223 50 5 chrX 151442393 151442817 -15207479 + Lx LINE L1 6212 6654 0 4 1740 1563 219 167 23 chrX 151442885 151443155 -15207141 + RMER6D LTR ERVK 3 280 -440 4 1740 5535 132 118 21 chrX 151443155 151444051 -15206245 - RLTR13C1 LTR ERVK 0 983 1 4 1740 1413 214 139 57 chrX 151444051 151444327 -15205969 + RMER6D LTR ERVK 265 591 -165 4 1740 502 49 0 0 chrX 151444368 151444429 -15205867 + L1Md_T LINE L1 5073 5133 -750 4 1740 20144 28 3 1 chrX 151444412 151446777 -15203519 + L1Md_T LINE L1 3218 5586 -297 5 1740 9194 4 0 0 chrX 151446777 151447773 -15202523 + L1Md_T LINE L1 5587 6582 0 5 1740 5470 3 0 0 chrX 151447778 151448380 -15201916 + L1Md_A LINE L1 4985 5586 -297 5 1740 9197 1 1 0 chrX 151448380 151449375 -15200921 + L1Md_A LINE L1 5587 6582 0 5 1740 2921 23 3 3 chrX 151449377 151449720 -15200576 + L1Md_T LINE L1 5243 5585 -298 4 1740 8537 36 0 0 chrX 151449721 151450717 -15199579 + L1Md_T LINE L1 5587 6582 0 4 1740 3731 67 0 0 chrX 151450718 151451183 -15199113 + L1Md_F3 LINE L1 5122 5586 -297 5 1740 8333 39 2 0 chrX 151451183 151452163 -15198133 + L1Md_F3 LINE L1 5587 6568 -16 5 1740 37846 29 1 7 chrX 151452171 151457341 -15192955 + L1Md_A LINE L1 458 5586 -297 5 1740 8848 18 1 0 chrX 151457341 151458336 -15191960 + L1Md_A LINE L1 5587 6582 0 5 1740 37846 23 0 0 chrX 151458336 151458349 -15191947 + L1Md_A LINE L1 5587 5599 -284 5 1740 2735 20 0 0 chrX 151458349 151458655 -15191641 + L1Md_T LINE L1 5281 5586 -297 5 1740 8311 42 1 0 chrX 151458655 151459648 -15190648 + L1Md_T LINE L1 5587 6580 -2 5 1740 279 109 0 0 chrX 151459676 151459722 -15190574 - L1_Mur1 LINE L1 -3280 2606 2561 5 1740 21 71 0 0 chrX 151459780 151459822 -15190474 + AT_rich Low_complexity Low_complexity 1 42 0 5 1740 1974 303 84 34 chrX 151459865 151460736 -15189560 - Lx6 LINE L1 -354 7106 6193 5 1740 924 218 36 33 chrX 151460751 151461026 -15189270 - ORR1A4 LTR MaLR -4 325 50 5 1740 587 294 74 46 chrX 151461053 151461338 -15188958 - Lx6 LINE L1 -1288 6172 5880 5 1740 494 269 0 0 chrX 151465450 151465554 -15184742 - RMER13A LTR ERVK 0 860 757 5 1740 204 67 0 0 chrX 151466703 151466733 -15183563 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1740 383 78 16 0 chrX 151469804 151469868 -15180428 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1740 2591 73 11 8 chrX 151470261 151470619 -15179677 - L1Md_F3 LINE L1 0 6584 6226 5 1740 2755 43 0 0 chrX 151470619 151470998 -15179298 + L1Md_A LINE L1 1175 1553 -4330 5 1740 24 0 0 0 chrX 151471064 151471088 -15179208 + AT_rich Low_complexity Low_complexity 1 24 0 5 1740 401 67 0 0 chrX 151471154 151471212 -15179084 - L1_Mur1 LINE L1 -742 5558 5475 5 1740 228 170 0 0 chrX 151471689 151471742 -15178554 + (CCTG)n Simple_repeat Simple_repeat 4 56 0 5 1740 1121 234 49 0 chrX 151473478 151473764 -15176532 - MTC LTR MaLR -121 300 1 5 1740 22 88 0 0 chrX 151474316 151474373 -15175923 + AT_rich Low_complexity Low_complexity 1 57 0 5 1740 612 306 11 29 chrX 151474513 151474789 -15175507 - Lx6 LINE L1 -11 7449 7179 5 1740 723 175 0 0 chrX 151474788 151474914 -15175382 - L1_Mur1 LINE L1 -311 5575 5450 5 1740 9672 164 16 5 chrX 151474940 151476620 -15173676 - L1_Mus4 LINE L1 -3 6633 4928 5 1740 1549 58 5 0 chrX 151476620 151476810 -15173486 + B2_Mm1a SINE B2 2 192 -1 5 1740 9672 191 16 7 chrX 151476810 151477830 -15172466 - L1_Mus4 LINE L1 -956 4927 3903 5 1740 2290 236 44 2 chrX 151477828 151478368 -15171928 + Lx LINE L1 6092 6654 0 5 1740 1568 213 138 67 chrX 151478428 151478732 -15171564 + RMER6C LTR ERVK 1 276 -414 5 1740 4941 149 116 23 chrX 151478732 151479632 -15170664 - RLTR13C1 LTR ERVK 0 983 1 5 1740 1568 213 138 67 chrX 151479632 151479907 -15170389 + RMER6C LTR ERVK 277 621 -69 5 1740 26 0 0 0 chrX 151480060 151480086 -15170210 + AT_rich Low_complexity Low_complexity 1 26 0 5 1740 2144 314 70 26 chrX 151480129 151481005 -15169291 - Lx6 LINE L1 -354 7106 6193 5 1740 531 188 29 22 chrX 151481020 151481156 -15169140 - ORR1A4 LTR MaLR -4 325 189 5 1740 664 102 0 0 chrX 151481164 151481262 -15169034 + U6 snRNA snRNA 10 107 0 5 1740 355 200 0 0 chrX 151481263 151481333 -15168963 + L1Md_F2 LINE L1 358 427 -6192 5 1740 34756 74 17 7 chrX 151481313 151486363 -15163933 + L1Md_F2 LINE L1 379 5589 -297 5 1740 7915 57 5 2 chrX 151486364 151487356 -15162940 + L1Md_F2 LINE L1 5591 6585 0 5 1740 567 292 74 51 chrX 151491192 151491263 -15159033 - Lx8 LINE L1 -4 7469 7403 5 1740 2918 247 55 23 chrX 151491263 151492092 -15158204 - RMER13A LTR ERVK -2 858 3 5 1740 567 292 74 51 chrX 151492092 151492356 -15157940 - Lx8 LINE L1 -71 7402 7126 5 1740 352 271 153 19 chrX 151492528 151492723 -15157573 - B3 SINE B2 -1 215 2 5 1740 635 227 52 0 chrX 151493837 151494009 -15156287 - URR1A DNA MER1_type -9 217 37 5 1740 617 67 0 0 chrX 151495619 151495708 -15154588 - L1Md_F3 LINE L1 -14 6570 6482 5 1740 189 0 0 0 chrX 151499643 151499664 -15150632 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1740 246 32 0 0 chrX 151499664 151499694 -15150602 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 1740 425 35 35 0 chrX 151499695 151499753 -15150543 + (CATA)n Simple_repeat Simple_repeat 4 63 0 5 1740 205 88 0 29 chrX 151500141 151500176 -15150120 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1740 7171 46 36 6 chrX 151500347 151501426 -15148870 - L1Md_F3 LINE L1 -1 6583 5472 2 1740 270 195 0 0 chrX 151501905 151501982 -15148314 + (CCTG)n Simple_repeat Simple_repeat 4 80 0 3 1740 1366 231 17 0 chrX 151503788 151504082 -15146214 - MTC LTR MaLR -122 299 1 4 1740 25 51 0 0 chrX 151504627 151504666 -15145630 + AT_rich Low_complexity Low_complexity 1 39 0 5 1740 3625 54 0 0 chrX 151504718 151505164 -15145132 + L1Md_F2 LINE L1 6135 6580 -2 6 1740 401 304 23 34 chrX 151505301 151505567 -15144729 - Lx6 LINE L1 -19 7441 7179 7 1740 706 154 15 0 chrX 151505566 151505696 -15144600 - L1_Mur1 LINE L1 -311 5575 5444 8 1740 983 196 1 1 chrX 151505702 151505928 -15144368 - L1_Mm LINE L1 -1755 4131 3903 9 1740 722 179 0 0 chrX 151505926 151506049 -15144247 + Lx LINE L1 6092 6214 -440 1 1740 2901 62 0 11 chrX 151506052 151506413 -15143883 - IAPEY2_LTR LTR ERVK 0 357 1 1 1740 2725 117 17 33 chrX 151506413 151507069 -15143227 - IAPEY3-int LTR ERVK 0 7581 6984 1 1740 188 354 53 9 chrX 151507069 151507183 -15143113 - L3b LINE CR1 -29 453 335 1 1740 3271 71 5 0 chrX 151507198 151507634 -15142662 - IAPEY3-int LTR ERVK -4991 2689 2252 1 1740 8611 133 12 37 chrX 151507623 151509119 -15141177 - IAPEY3-int LTR ERVK -5698 1982 524 1 1740 658 140 90 39 chrX 151509118 151509274 -15141022 - IAPLTR4_I LTR ERVK -1290 180 17 1 1740 2855 65 0 0 chrX 151509274 151509628 -15140668 - IAPEY2_LTR LTR ERVK -3 354 1 1 1740 1595 225 50 5 chrX 151509628 151510052 -15140244 + Lx LINE L1 6212 6654 0 1 1740 1546 225 167 23 chrX 151510120 151510390 -15139906 + RMER6D LTR ERVK 3 285 -435 1 1740 5123 132 117 20 chrX 151510390 151511286 -15139010 - RLTR13C1 LTR ERVK 0 983 1 1 1740 1546 224 144 54 chrX 151511286 151511562 -15138734 + RMER6D LTR ERVK 265 591 -165 1 1740 468 49 0 0 chrX 151511603 151511664 -15138632 + L1Md_F3 LINE L1 5073 5133 -750 1 1740 11179 28 5 0 chrX 151511647 151513060 -15137236 + L1Md_F3 LINE L1 3218 4637 -1246 1 1740 767 38 0 0 chrX 151513061 151513167 -15137129 + L1Md_T LINE L1 6477 6582 0 1 1740 3470 67 0 0 chrX 151513168 151513633 -15136663 + L1Md_F3 LINE L1 5122 5586 -297 1 1740 8148 44 0 0 chrX 151513634 151514615 -15135681 + L1Md_F3 LINE L1 5588 6568 -16 1 217 35194 29 1 7 chrX 151514623 151519790 -15130506 + L1Md_T LINE L1 458 5586 -297 1 1741 8287 40 0 0 chrX 151519790 151520783 -15129513 + L1Md_T LINE L1 5587 6579 -3 1 1741 256 109 0 0 chrX 151520811 151520857 -15129439 - L1_Mur1 LINE L1 -3280 2606 2561 2 1741 1802 302 80 35 chrX 151521001 151521874 -15128422 - Lx6 LINE L1 -354 7106 6195 2 1741 993 215 40 36 chrX 151521891 151522166 -15128130 - ORR1A4 LTR MaLR -4 325 50 2 1741 504 298 74 46 chrX 151522193 151522478 -15127818 - Lx6 LINE L1 -1288 6172 5880 2 1741 207 0 0 0 chrX 151526135 151526158 -15124138 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1741 545 286 8 8 chrX 151526601 151526728 -15123568 - RMER13A LTR ERVK 0 860 734 2 1741 306 67 0 0 chrX 151527854 151527899 -15122397 + (A)n Simple_repeat Simple_repeat 1 45 0 2 1741 399 224 35 0 chrX 151529969 151530054 -15120242 - RLTR25A LTR ERVK -1015 88 1 2 1741 369 232 242 8 chrX 151530952 151531114 -15119182 - Lx9 LINE L1 -2 7642 7445 2 1741 210 91 0 0 chrX 151531114 151531147 -15119149 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 2 1741 369 232 242 8 chrX 151531147 151531232 -15119064 - Lx9 LINE L1 -200 7444 7338 2 1741 508 293 0 0 chrX 151531250 151531373 -15118923 + MTD LTR MaLR 2 124 -295 2 1741 780 161 8 0 chrX 151531600 151531730 -15118566 - B1_Mus2 SINE Alu -2 145 15 3 1741 339 194 28 101 chrX 151531643 151531752 -15118544 - MT2B LTR ERVL -344 257 157 3 1741 722 354 9 22 chrX 151532042 151532317 -15117979 + B4A SINE B4 21 290 -2 3 1741 339 78 0 0 chrX 151532338 151532389 -15117907 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1741 249 363 10 0 chrX 151532839 151532941 -15117355 + MIR SINE MIR 155 257 -5 3 1741 305 205 0 103 chrX 151533101 151533237 -15117059 - Lx9 LINE L1 -1 7643 7522 3 1741 897 93 0 21 chrX 151533268 151533410 -15116886 - L1_Mus2 LINE L1 0 6566 6428 3 1741 3363 115 16 54 chrX 151533623 151533859 -15116437 + RLTR33 LTR ERVK 1 231 -447 3 1741 1288 88 22 0 chrX 151533859 151534040 -15116256 - B2_Mm1t SINE B2 -7 186 2 3 1741 3363 115 16 54 chrX 151534040 151534356 -15115940 + RLTR33 LTR ERVK 232 532 -146 3 1741 1336 59 11 0 chrX 151534356 151534543 -15115753 - L1_Mus3 LINE L1 -814 5824 5636 3 1741 6138 88 13 2 chrX 151534543 151535410 -15114886 + L1_Mus3 LINE L1 5763 6638 0 3 1741 811 184 0 20 chrX 151535410 151535560 -15114736 + RLTR33 LTR ERVK 525 671 -7 3 1741 216 67 0 0 chrX 151535560 151535590 -15114706 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1741 843 55 0 0 chrX 151535769 151535878 -15114418 + (TG)n Simple_repeat Simple_repeat 2 110 0 4 1741 690 86 0 0 chrX 151536563 151536656 -15113640 + L1Md_F2 LINE L1 5494 5586 -297 4 1741 7824 62 2 5 chrX 151536657 151537654 -15112642 + L1Md_F2 LINE L1 5588 6581 -1 4 1741 3106 194 36 50 chrX 151539884 151540662 -15109634 + L1_Mur3 LINE L1 524 1290 -6422 4 1741 1537 265 190 18 chrX 151540687 151541902 -15108394 + L1_Mur3 LINE L1 17 1029 -6699 4 1741 498 255 42 21 chrX 151541905 151542049 -15108247 + B1_Mus1 SINE Alu 1 147 -1 4 1741 536 258 17 0 chrX 151542069 151542267 -15108029 + L1_Mur3 LINE L1 1186 1389 -4491 4 1741 305 115 38 13 chrX 151542267 151542346 -15107950 + (TA)n Simple_repeat Simple_repeat 1 81 0 4 1741 3460 111 28 0 chrX 151542411 151542987 -15107309 - L1_Mur1 LINE L1 -1629 4257 3666 4 1741 6923 111 45 2 chrX 151542997 151543228 -15107068 + Lx3B LINE L1 4701 4932 -954 4 1741 198 0 0 0 chrX 151543228 151543250 -15107046 + (TA)n Simple_repeat Simple_repeat 2 23 0 4 1741 6923 114 56 2 chrX 151543250 151544918 -15105378 + Lx3B LINE L1 4933 6674 -299 4 1741 15880 165 77 80 chrX 151544933 151549014 -15101282 + L1VL4 LINE L1 499 4856 -1027 5 1741 3659 70 11 0 chrX 151549014 151549484 -15100812 - L1_Mus1 LINE L1 -1 6566 6092 5 1741 15880 154 91 95 chrX 151549484 151550435 -15099861 + L1VL4 LINE L1 4857 5460 -423 5 1741 1935 93 0 0 chrX 151550460 151550738 -15099558 + L1_Mus1 LINE L1 5806 6083 -484 5 1741 1477 91 4 0 chrX 151550739 151550969 -15099327 + MusHAL1 LINE L1 1150 1380 -1332 5 1741 27333 152 30 15 chrX 151551207 151553945 -15096351 + L1_Mus2 LINE L1 387 3177 -2706 5 1741 230 0 33 0 chrX 151553945 151553975 -15096321 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1741 27333 110 14 14 chrX 151553975 151557485 -15092811 + L1_Mus2 LINE L1 3178 6566 0 5 1741 624 25 0 0 chrX 151557759 151557839 -15092457 - L1Md_T LINE L1 -2 6580 6501 5 1741 1797 193 25 8 chrX 151558691 151559118 -15091178 + Lx7 LINE L1 5504 5922 -1774 5 1741 581 196 105 0 chrX 151559118 151559241 -15091055 + B1_Mus2 SINE Alu 1 137 -10 5 1741 245 29 0 29 chrX 151559241 151559276 -15091020 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1741 1797 212 44 42 chrX 151559285 151559386 -15090910 + Lx7 LINE L1 5923 6039 -1657 5 1741 26 0 0 0 chrX 151559528 151559554 -15090742 + AT_rich Low_complexity Low_complexity 1 26 0 6 1741 238 303 29 29 chrX 151560611 151560679 -15089617 - ID_B1 SINE B4 -67 157 90 6 1741 195 100 0 0 chrX 151560771 151560801 -15089495 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1741 2727 272 31 20 chrX 151561238 151562032 -15088264 + ORR1D1-int LTR MaLR 564 1366 -4 6 1741 445 291 36 89 chrX 151562036 151562298 -15087998 + ORR1D1 LTR MaLR 1 246 -121 6 1741 667 223 158 21 chrX 151562307 151562512 -15087784 + ORR1C2 LTR MaLR 147 384 0 6 1741 364 92 0 44 chrX 151563038 151563106 -15087190 + (TTTTC)n Simple_repeat Simple_repeat 4 68 0 6 1741 1305 83 0 0 chrX 151563112 151563292 -15087004 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 6 1741 4418 87 3 2 chrX 151563306 151563906 -15086390 - L1_Mus4 LINE L1 -11 6625 6025 6 1741 21 36 0 0 chrX 151564145 151564173 -15086123 + AT_rich Low_complexity Low_complexity 1 28 0 6 1741 869 164 5 5 chrX 151564608 151564822 -15085474 + CT-rich Low_complexity Low_complexity 1 214 0 6 1741 3266 171 59 1 chrX 151566208 151567015 -15083281 + L1_Mur2 LINE L1 553 1413 -4464 7 1741 491 135 0 13 chrX 151567004 151567108 -15083188 + L1_Mur2 LINE L1 4998 5102 -781 7 1741 26 30 0 0 chrX 151567175 151567208 -15083088 + AT_rich Low_complexity Low_complexity 1 33 0 7 1741 207 0 0 0 chrX 151567305 151567328 -15082968 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 7 1741 282 274 0 0 chrX 151567985 151568047 -15082249 + PB1D10 SINE Alu 42 103 -14 7 1741 5548 86 28 6 chrX 151568199 151569463 -15080833 - L1VL2 LINE L1 -1789 1826 536 7 1741 2156 205 61 39 chrX 151569477 151570274 -15080022 + Lx9 LINE L1 5259 6110 -1534 7 1741 2060 211 117 26 chrX 151570333 151570907 -15079389 + Lx9 LINE L1 6310 6935 -709 7 1741 3388 170 31 16 chrX 151570907 151571553 -15078743 + RMER6A LTR ERVK 94 749 -7 7 1741 322 261 0 0 chrX 151571560 151571625 -15078671 + RLTR40 LTR ERVK 746 810 -7 7 1741 2496 149 108 13 chrX 151572069 151572531 -15077765 + RLTR19C LTR ERVK 1 506 0 7 1741 1051 220 29 17 chrX 151572602 151572842 -15077454 - ORR1D1 LTR MaLR 0 374 132 7 1741 1045 97 14 0 chrX 151572845 151572990 -15077306 + B1_Mm SINE Alu 1 147 0 8 1741 186 71 0 0 chrX 151572990 151573018 -15077278 + (A)n Simple_repeat Simple_repeat 1 28 0 8 1741 1839 226 37 208 chrX 151573038 151573366 -15076930 - RMER19C LTR ERVK 0 611 327 8 1741 2624 85 86 65 chrX 151573366 151573831 -15076465 - IAPLTR2_Mm LTR ERVK 0 475 1 8 1741 1839 226 37 208 chrX 151573831 151574238 -15076058 - RMER19C LTR ERVK -285 326 2 8 1741 469 217 85 0 chrX 151574239 151574345 -15075951 - ORR1D1 LTR MaLR -257 117 3 7 1741 907 251 159 98 chrX 151574800 151575462 -15074834 + RMER1A Other Other 15 531 -535 8 1741 1019 238 198 98 chrX 151575472 151575962 -15074334 - RMER4B LTR ERVK -11 574 36 8 1741 304 56 55 27 chrX 151576083 151576156 -15074140 + (CAAA)n Simple_repeat Simple_repeat 2 76 0 8 1741 923 275 46 4 chrX 151576329 151576592 -15073704 - MurERV4-int LTR ERVK -4986 274 1 8 1741 733 193 46 7 chrX 151576643 151576794 -15073502 - RMER4B LTR ERVK -408 177 21 8 1741 516 16 0 0 chrX 151576918 151576979 -15073317 + (GA)n Simple_repeat Simple_repeat 2 62 0 8 1741 471 299 119 0 chrX 151576987 151577188 -15073108 + Lx9 LINE L1 7241 7465 -179 7 1741 384 22 0 0 chrX 151577198 151577243 -15073053 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1741 3727 50 0 0 chrX 151577622 151578102 -15072194 - L1_Mus1 LINE L1 -501 6066 5587 9 1741 1334 48 0 0 chrX 151578113 151578279 -15072017 + L1_Mus1 LINE L1 6087 6252 -315 9 1741 481 29 0 14 chrX 151578276 151578347 -15071949 + L1Md_F2 LINE L1 6502 6571 -11 9 1741 2167 81 75 0 chrX 151578396 151578726 -15071570 + L1_Mus1 LINE L1 6237 6567 0 9 1741 228 67 0 0 chrX 151579312 151579342 -15070954 + (CCCCCT)n Simple_repeat Simple_repeat 3 32 0 9 1741 3021 66 10 0 chrX 151582162 151582558 -15067738 - MTB LTR MaLR 0 400 1 9 1741 2404 185 106 168 chrX 151582898 151583754 -15066542 + RLTR40 LTR ERVK 1 803 -14 9 1741 356 178 0 0 chrX 151584844 151584917 -15065379 - RLTR42-int LTR ERVK -3522 2000 1928 9 1741 292 187 53 13 chrX 151585322 151585398 -15064898 - RLTR42-int LTR ERVK -3915 1607 1529 9 1741 516 16 0 0 chrX 151585884 151585945 -15064351 + (CA)n Simple_repeat Simple_repeat 2 62 0 9 1741 1070 84 28 0 chrX 151586256 151586398 -15063898 - B1_Mus1 SINE Alu -1 147 2 9 1741 402 39 0 0 chrX 151586685 151586737 -15063559 + (TC)n Simple_repeat Simple_repeat 1 52 0 9 1741 1202 119 7 97 chrX 151586816 151587085 -15063211 + Lx LINE L1 6410 6654 0 1 1741 241 218 35 82 chrX 151588505 151588590 -15061706 - RLTR22_Mus LTR ERVK -492 1316 1236 1 1741 2669 234 34 17 chrX 151588624 151589269 -15061027 - Lx7 LINE L1 -638 7058 6403 1 1741 718 154 0 7 chrX 151589273 151589410 -15060886 - L1_Mur3 LINE L1 -3443 2437 2302 1 1741 854 168 25 50 chrX 151592603 151592803 -15057493 - L1_Mur3 LINE L1 -3566 2314 2120 1 1741 804 285 0 6 chrX 151593526 151593685 -15056611 + B3A SINE B2 5 162 -36 1 1741 674 273 21 7 chrX 151593752 151593892 -15056404 + RSINE1 SINE B4 4 145 -20 1 1741 23 0 0 0 chrX 151593938 151593961 -15056335 + AT_rich Low_complexity Low_complexity 1 23 0 1 1741 3395 43 0 0 chrX 151594518 151594914 -15055382 - MTA_Mm LTR MaLR 0 396 1 1 1741 8795 51 0 5 chrX 151594914 151596017 -15054279 - MTA_Mm-int LTR MaLR 0 1098 1 1 1741 3224 51 18 0 chrX 151596017 151596406 -15053890 - MTA_Mm LTR MaLR 0 396 1 1 1741 1819 57 4 0 chrX 151596621 151596916 -15053380 - L1_Mus1 LINE L1 0 6567 6337 1 1741 2846 47 3 40 chrX 151596925 151597305 -15052991 - L1Md_F2 LINE L1 0 6582 6217 1 1741 227 290 16 0 chrX 151597495 151597557 -15052739 + CT-rich Low_complexity Low_complexity 3 65 0 1 1741 1827 147 110 14 chrX 151597561 151597907 -15052389 + RLTR30 LTR ERV1 1 379 0 1 1741 663 275 138 0 chrX 151597965 151598154 -15052142 - ID_B1 SINE B4 -9 215 1 1 1741 213 39 0 0 chrX 151598611 151598637 -15051659 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1741 226 271 161 12 chrX 151598711 151598805 -15051491 + B1F SINE Alu 1 104 -13 1 1741 509 266 31 52 chrX 151598816 151599010 -15051286 - B3A SINE B2 -6 192 3 1 1741 369 0 0 0 chrX 151599099 151599140 -15051156 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1741 488 273 23 80 chrX 151599746 151599921 -15050375 - RSINE1 SINE B4 0 165 1 1 1741 845 195 75 20 chrX 151600215 151600414 -15049882 - URR1A DNA MER1_type 0 226 17 1 1741 533 258 58 50 chrX 151600784 151600923 -15049373 + ID_B1 SINE B4 84 223 -1 1 1741 248 289 59 24 chrX 151601010 151601093 -15049203 + MER68 LTR ERVL 160 245 -318 1 1741 878 204 25 0 chrX 151601093 151601255 -15049041 - RMER15 LTR ERVL 0 575 410 1 1741 3027 131 37 2 chrX 151601255 151601745 -15048551 + RLTR13D6 LTR ERVK 1 507 -395 1 1741 3692 123 16 12 chrX 151601734 151602312 -15047984 + RLTR13D1 LTR ERVK 227 806 0 1 1741 1338 208 200 37 chrX 151602314 151602669 -15047627 - RMER15 LTR ERVL -162 413 1 1 1741 743 294 0 0 chrX 151602728 151602874 -15047422 + RSINE1 SINE B4 19 164 -1 1 1741 24 0 0 0 chrX 151602925 151602949 -15047347 + AT_rich Low_complexity Low_complexity 1 24 0 1 1741 229 247 49 49 chrX 151603691 151603772 -15046524 - ID4_ SINE ID 0 83 3 1 1741 873 255 15 0 chrX 151603790 151603994 -15046302 - B3 SINE B2 -5 211 5 1 1741 279 220 171 22 chrX 151604158 151604339 -15045957 + L1M5 LINE L1 5315 5522 -642 1 1741 238 247 153 47 chrX 151604369 151604454 -15045842 + RSINE1 SINE B4 4 97 -68 1 1741 333 0 0 0 chrX 151604472 151604509 -15045787 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1741 505 293 19 26 chrX 151604616 151604770 -15045526 + RSINE1 SINE B4 5 157 -8 1 1741 474 244 49 18 chrX 151604818 151604981 -15045315 + L1MB7 LINE L1 5671 5838 -346 1 1741 388 269 18 44 chrX 151605019 151605132 -15045164 + PB1D9 SINE Alu 2 111 -9 1 1741 237 276 35 0 chrX 151605359 151605417 -15044879 + ID4 SINE ID 1 60 -23 1 1741 555 188 0 0 chrX 151605418 151605530 -15044766 + CT-rich Low_complexity Low_complexity 2 113 0 1 1741 250 236 216 27 chrX 151605530 151605678 -15044618 + L1MEg LINE L1 991 1166 -4918 1 1741 3580 77 0 26 chrX 151605848 151606423 -15043873 + MusHAL1 LINE L1 837 1396 -1316 1 1741 208 70 47 0 chrX 151606790 151606833 -15043463 + (CAAAA)n Simple_repeat Simple_repeat 3 47 0 1 1741 555 290 35 0 chrX 151607240 151607385 -15042911 + MER20 DNA MER1_type 62 211 -8 1 1741 453 103 0 0 chrX 151607853 151607921 -15042375 + (TATG)n Simple_repeat Simple_repeat 4 71 0 1 1741 632 259 37 19 chrX 151607925 151608086 -15042210 - B3A SINE B2 -34 164 1 1 1741 377 346 53 0 chrX 151608124 151608257 -15042039 + ID_B1 SINE B4 85 224 0 1 1741 183 100 0 0 chrX 151608308 151608338 -15041958 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1741 1103 88 0 13 chrX 151608541 151608690 -15041606 + B1_Mus2 SINE Alu 1 147 0 1 1741 352 317 107 71 chrX 151609347 151609398 -15040898 + MLT1G3 LTR MaLR 108 150 -445 1 1741 1288 164 27 0 chrX 151609398 151609618 -15040678 + URR1A DNA MER1_type 1 226 0 1 1741 352 317 107 71 chrX 151609618 151609763 -15040533 + MLT1G3 LTR MaLR 151 311 -284 1 1741 852 261 54 0 chrX 151609908 151610111 -15040185 - ID_B1 SINE B4 -6 218 5 1 1741 198 0 0 0 chrX 151610564 151610586 -15039710 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 1741 295 176 82 0 chrX 151610689 151610774 -15039522 + L1MB2 LINE L1 5873 5964 -207 1 1741 491 271 204 0 chrX 151610790 151610971 -15039325 + ID_B1 SINE B4 5 222 -2 1 1741 514 246 161 16 chrX 151611059 151611245 -15039051 + B3 SINE B2 4 216 0 1 1741 349 351 40 85 chrX 151611274 151611415 -15038881 + ID_B1 SINE B4 5 135 -89 1 1741 1113 87 0 0 chrX 151611415 151611553 -15038743 + B1_Mm SINE Alu 2 139 -8 1 1741 243 0 0 0 chrX 151611553 151611580 -15038716 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1741 349 351 40 85 chrX 151611580 151611661 -15038635 + ID_B1 SINE B4 136 217 -7 1 1741 419 219 0 12 chrX 151611749 151611832 -15038464 - ID2 SINE ID -1 82 1 1 1741 660 273 93 0 chrX 151612281 151612442 -15037854 + B3A SINE B2 1 176 -22 1 1741 402 21 0 0 chrX 151612444 151612491 -15037805 + (TC)n Simple_repeat Simple_repeat 1 47 0 1 1741 342 0 0 0 chrX 151612491 151612529 -15037767 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1741 445 314 0 56 chrX 151612542 151612667 -15037629 + B1_Mur1 SINE Alu 3 120 -29 1 1741 493 314 91 23 chrX 151612794 151612970 -15037326 + B3A SINE B2 2 189 -9 1 1741 554 176 25 0 chrX 151613066 151613185 -15037111 - Lx4B LINE L1 -2 7056 6935 1 1741 472 231 25 8 chrX 151613189 151613311 -15036985 - Lx4B LINE L1 -251 6807 6684 1 1741 2532 163 9 20 chrX 151613288 151613733 -15036563 + Lx4B LINE L1 6242 6681 -377 1 1741 652 69 29 10 chrX 151614522 151614624 -15035672 + (AGGGGG)n Simple_repeat Simple_repeat 1 104 0 1 1741 296 294 15 0 chrX 151615168 151615236 -15035060 + ID4 SINE ID 2 70 -13 1 1741 762 11 0 0 chrX 151615269 151615356 -15034940 + (GGAGA)n Simple_repeat Simple_repeat 4 90 0 1 1741 2093 181 22 8 chrX 151615383 151615751 -15034545 + RLTR14 LTR ERV1 10 382 0 1 1741 696 64 0 0 chrX 151615751 151615845 -15034451 + (ATAGG)n Simple_repeat Simple_repeat 5 98 0 1 1741 5062 56 16 8 chrX 151615940 151616556 -15033740 + L1Md_F2 LINE L1 5959 6579 -3 1 1741 1496 202 70 144 chrX 151616801 151617369 -15032927 + RLTR11A LTR ERVK 1 526 -2 1 1741 312 396 36 0 chrX 151617395 151617534 -15032762 - MLT1J LTR MaLR -220 292 149 1 1741 666 194 33 80 chrX 151618730 151618881 -15031415 + B1_Mur2 SINE Alu 1 144 -5 1 1741 482 119 12 0 chrX 151619181 151619265 -15031031 + (TG)n Simple_repeat Simple_repeat 1 85 0 1 1741 428 313 0 0 chrX 151619267 151619366 -15030930 - RSINE1 SINE B4 -38 127 29 1 1741 372 305 0 0 chrX 151619550 151619632 -15030664 - ID4 SINE ID 0 83 2 1 1741 516 291 62 34 chrX 151619672 151619818 -15030478 - RSINE1 SINE B4 -4 161 12 1 1741 490 280 80 0 chrX 151619849 151619974 -15030322 - B1F SINE Alu -11 138 4 1 1741 5232 205 39 2 chrX 151620935 151621923 -15028373 + Lx7 LINE L1 6404 7427 -269 1 1741 395 179 36 0 chrX 151621923 151622007 -15028289 + Lx7 LINE L1 7610 7696 0 1 1741 221 138 0 65 chrX 151622007 151622024 -15028272 + A-rich Low_complexity Low_complexity 1 14 0 1 1741 1132 63 34 34 chrX 151622024 151622171 -15028125 + B1_Mus1 SINE Alu 2 148 0 1 1741 221 138 0 65 chrX 151622171 151622215 -15028081 + A-rich Low_complexity Low_complexity 15 58 0 1 1741 7748 106 4 6 chrX 151622246 151623324 -15026972 - Lx4A LINE L1 -843 6215 5129 1 1741 1044 67 20 13 chrX 151623324 151623475 -15026821 + L1Md_F2 LINE L1 6429 6580 -2 1 1741 7748 114 5 14 chrX 151623475 151623843 -15026453 - Lx4A LINE L1 -749 5128 4767 1 1741 2809 75 87 15 chrX 151623843 151624236 -15026060 + BGLII LTR ERVK 1 421 0 1 1741 7748 114 5 14 chrX 151624236 151624289 -15026007 - Lx4A LINE L1 -1111 4766 4717 1 1741 5279 141 54 11 chrX 151624289 151624804 -15025492 + Lx4A LINE L1 6214 6752 -306 1 1741 456 19 0 0 chrX 151624804 151624857 -15025439 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1741 5279 141 54 11 chrX 151624857 151625151 -15025145 + Lx4A LINE L1 6753 7057 -1 1 1741 22 0 0 0 chrX 151625151 151625173 -15025123 + AT_rich Low_complexity Low_complexity 1 22 0 1 1741 22 35 0 0 chrX 151625213 151625242 -15025054 + AT_rich Low_complexity Low_complexity 1 29 0 1 1741 209 244 56 79 chrX 151625256 151625345 -15024951 + MER5B DNA MER1_type 59 145 -33 1 1741 1975 239 57 10 chrX 151625433 151625924 -15024372 + Lx9 LINE L1 7117 7630 -14 1 1741 613 180 221 0 chrX 151625947 151626069 -15024227 - B1_Mur1 SINE Alu 0 149 1 1 1741 866 239 13 6 chrX 151627387 151627559 -15022737 + ID_B1 SINE B4 67 246 -46 1 1741 831 129 0 0 chrX 151627591 151627723 -15022573 + (GAAA)n Simple_repeat Simple_repeat 4 135 0 1 1741 385 293 180 26 chrX 151628103 151628331 -15021965 - MER34A LTR ERV1 -268 303 41 1 1741 739 239 58 0 chrX 151629223 151629361 -15020935 + RSINE1 SINE B4 2 147 -18 1 1741 22 0 0 0 chrX 151629371 151629393 -15020903 + AT_rich Low_complexity Low_complexity 1 22 0 1 1741 423 0 0 0 chrX 151629480 151629527 -15020769 + (TAA)n Simple_repeat Simple_repeat 3 49 0 1 1741 3420 51 40 26 chrX 151629808 151630229 -15020067 - L1_Mus1 LINE L1 -1 6566 6140 1 1741 1369 20 0 0 chrX 151630320 151630467 -15019829 + B1_Mm SINE Alu 1 147 0 1 1741 352 229 70 35 chrX 151630513 151630599 -15019697 + PB1D10 SINE Alu 29 117 0 1 1741 243 0 0 0 chrX 151630748 151630775 -15019521 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 1741 521 286 47 107 chrX 151630799 151631097 -15019199 - B4 SINE B4 -12 280 1 2 1741 659 292 0 7 chrX 151631156 151631301 -15018995 - RSINE1 SINE B4 -20 145 2 2 1741 517 338 0 0 chrX 151631615 151631748 -15018548 - ID_B1 SINE B4 -10 214 82 2 1741 257 292 0 0 chrX 151631773 151631838 -15018458 + ID4 SINE ID 18 82 -1 2 1741 451 248 105 0 chrX 151631907 151632012 -15018284 + PB1D10 SINE Alu 1 116 -1 2 1741 883 164 5 18 chrX 151632012 151632230 -15018066 + GA-rich Low_complexity Low_complexity 1 214 0 2 1741 204 339 23 62 chrX 151632362 151632491 -15017805 + L3 LINE CR1 4219 4342 -147 2 1741 535 333 0 0 chrX 151632647 151632788 -15017508 + ID_B1 SINE B4 82 222 -2 2 1741 644 269 119 0 chrX 151632968 151633161 -15017135 + B3 SINE B2 1 216 0 2 1741 2292 248 45 20 chrX 151633162 151633821 -15016475 + Lx6 LINE L1 5646 6346 -704 2 1741 1381 265 95 81 chrX 151633840 151634135 -15016161 + Lx6 LINE L1 6949 7160 -300 2 1741 894 95 76 55 chrX 151634135 151634280 -15016016 - B1_Mus1 SINE Alu 0 148 1 2 1741 1381 249 102 84 chrX 151634280 151634335 -15015961 + Lx6 LINE L1 7161 7199 -261 2 1741 450 0 0 0 chrX 151634335 151634385 -15015911 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 2 1741 1186 66 0 0 chrX 151634385 151634522 -15015774 - B1_Mus2 SINE Alu -10 137 1 2 1741 1381 249 102 84 chrX 151634522 151634777 -15015519 + Lx6 LINE L1 7200 7455 -5 2 1741 708 99 9 0 chrX 151634813 151634924 -15015372 + Lx2 LINE L1 6885 6996 -1 2 1741 748 221 14 35 chrX 151634983 151635128 -15015168 + B1_Mur2 SINE Alu 1 142 -7 2 1741 553 48 36 0 chrX 151635133 151635217 -15015079 + (TAGA)n Simple_repeat Simple_repeat 4 90 0 2 1741 234 247 0 138 chrX 151635389 151635483 -15014813 + ID_B1 SINE B4 76 156 -68 2 1741 259 282 0 93 chrX 151635401 151635487 -15014809 + PB1D10 SINE Alu 2 79 -38 2 1741 263 269 0 0 chrX 151635583 151635635 -15014661 + ID_B1 SINE B4 110 161 -63 2 1741 1253 68 0 0 chrX 151635717 151635863 -15014433 + B1_Mus1 SINE Alu 3 148 0 2 1741 2845 106 12 35 chrX 151636460 151636890 -15013406 + RLTR23 LTR ERV1 11 430 0 2 1741 230 267 0 74 chrX 151637141 151637222 -15013074 + polypurine Low_complexity Low_complexity 4 78 0 2 1741 25 0 0 0 chrX 151638363 151638388 -15011908 + AT_rich Low_complexity Low_complexity 1 25 0 2 1741 5327 246 87 105 chrX 151638406 151639596 -15010700 - Lx7 LINE L1 -273 7423 6195 2 1741 3373 60 8 0 chrX 151639596 151639993 -15010303 + MTB LTR MaLR 1 400 0 2 1741 5327 246 87 105 chrX 151639993 151640147 -15010149 - Lx7 LINE L1 -1502 6194 5987 2 1741 270 185 0 53 chrX 151640147 151640204 -15010092 + RLTR11A2 LTR ERVK 1 54 -473 2 1741 409 218 49 10 chrX 151640180 151640217 -15010079 - MTB_Mm LTR MaLR -301 106 65 2 1741 1184 39 0 0 chrX 151640217 151640347 -15009949 + B1_Mm SINE Alu 2 131 -16 2 1741 409 218 49 10 chrX 151640347 151640411 -15009885 - MTB_Mm LTR MaLR -343 64 2 2 1741 5327 226 50 71 chrX 151640411 151640681 -15009615 - Lx7 LINE L1 -1743 5953 5698 2 1741 1058 80 65 0 chrX 151640681 151640819 -15009477 - B1_Mm SINE Alu 0 147 1 2 1741 5327 212 26 48 chrX 151640819 151641165 -15009131 - Lx7 LINE L1 -1996 5700 5347 2 1741 892 259 44 0 chrX 151641166 151641371 -15008925 - B3 SINE B2 -2 214 1 2 1741 443 246 137 0 chrX 151641504 151641626 -15008670 + B1F SINE Alu 4 140 -9 2 1741 726 62 0 0 chrX 151641626 151641722 -15008574 + (GAAA)n Simple_repeat Simple_repeat 2 97 0 2 1741 205 351 8 102 chrX 151641851 151641978 -15008318 - L2c LINE L2 -3 3384 3270 2 1741 1516 141 7 25 chrX 151642104 151642380 -15007916 + Lx4B LINE L1 5915 6185 -873 2 1741 300 278 0 115 chrX 151642380 151642510 -15007786 + ID_B1 SINE B4 108 222 -2 2 1741 315 0 0 0 chrX 151642635 151642670 -15007626 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1741 500 218 0 43 chrX 151642671 151642786 -15007510 - RSINE1 SINE B4 -45 120 11 2 1741 229 355 55 27 chrX 151642994 151643104 -15007192 - PB1D10 SINE Alu -1 116 4 2 1741 429 263 136 111 chrX 151643369 151643685 -15006611 + L1MC5 LINE L1 6764 7087 -874 2 1741 234 0 0 0 chrX 151643688 151643714 -15006582 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 1741 291 239 55 104 chrX 151643717 151643918 -15006378 + L1MC5 LINE L1 7141 7331 -630 2 1741 379 52 0 33 chrX 151644240 151644300 -15005996 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1741 430 256 110 83 chrX 151644302 151644447 -15005849 - B3 SINE B2 -66 150 2 2 1741 337 303 0 0 chrX 151644893 151644969 -15005327 + RSINE1 SINE B4 38 113 -52 2 1741 242 257 13 26 chrX 151645006 151645082 -15005214 + MIRb SINE MIR 152 226 -42 2 1741 2230 109 27 57 chrX 151645183 151645552 -15004744 + Lx2 LINE L1 6640 6997 0 2 1741 268 155 25 112 chrX 151645563 151645643 -15004653 + RMER16 LTR ERVK 1 73 -460 2 1741 189 0 0 0 chrX 151645676 151645697 -15004599 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 2 1741 904 123 50 7 chrX 151645959 151646098 -15004198 - B1_Mus1 SINE Alu -1 147 3 2 1741 240 35 0 0 chrX 151646104 151646133 -15004163 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2 1741 480 270 9 9 chrX 151646133 151646245 -15004051 - PB1 SINE Alu -10 117 6 2 1741 256 277 141 84 chrX 151646245 151646275 -15004021 - ID_B1 SINE B4 -11 213 64 2 1741 274 214 216 39 chrX 151646276 151646378 -15003918 - PB1D7 SINE Alu 0 120 1 2 1741 321 175 160 28 chrX 151648322 151648428 -15001868 + B1F SINE Alu 13 132 -17 2 1741 252 0 0 0 chrX 151649424 151649452 -15000844 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1742 271 273 0 83 chrX 151651321 151651397 -14998899 + Charlie1 DNA MER1_type 145 214 -2567 2 1742 743 174 19 71 chrX 151651397 151651552 -14998744 - B1_Mur2 SINE Alu -2 147 1 2 1742 271 273 0 83 chrX 151651552 151651583 -14998713 + Charlie1 DNA MER1_type 215 243 -2538 2 1742 1145 139 114 43 chrX 151651610 151651820 -14998476 + URR1A DNA MER1_type 2 226 0 2 1742 438 20 0 0 chrX 151651846 151651897 -14998399 + (TTCC)n Simple_repeat Simple_repeat 1 51 0 2 1742 630 117 48 0 chrX 151651906 151652009 -14998287 - B1_Mus1 SINE Alu -1 147 40 2 1742 298 48 38 45 chrX 151652298 151652360 -14997936 - B1_Mus2 SINE Alu -1 146 88 2 1742 1193 63 0 7 chrX 151652455 151652599 -14997697 - B1_Mus2 SINE Alu -2 145 3 2 1742 3189 52 3 13 chrX 151653146 151653534 -14996762 - L1_Mus1 LINE L1 0 6567 6184 2 1742 388 311 16 32 chrX 151654081 151654207 -14996089 - MLT1E1A LTR MaLR -2 678 555 2 1742 360 0 0 0 chrX 151654284 151654324 -14995972 + (TC)n Simple_repeat Simple_repeat 2 41 0 2 1742 243 0 0 0 chrX 151654325 151654352 -14995944 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1742 319 203 0 0 chrX 151654378 151654437 -14995859 - B1_Mus1 SINE Alu -88 60 2 2 1742 257 236 0 22 chrX 151654474 151654565 -14995731 + (TATG)n Simple_repeat Simple_repeat 3 91 0 2 1742 227 179 0 0 chrX 151654613 151654652 -14995644 + URR1B DNA MER1_type 1 39 -186 2 1742 573 124 19 19 chrX 151654664 151654771 -14995525 + URR1B DNA MER1_type 119 225 0 2 1742 379 244 0 65 chrX 151654771 151654843 -14995453 - B3A SINE B2 -85 113 48 2 1742 275 0 0 28 chrX 151654845 151654881 -14995415 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 2 1742 227 320 100 91 chrX 151654937 151655047 -14995249 - MLT1E2 LTR MaLR -225 402 292 2 1742 837 264 31 94 chrX 151655119 151655168 -14995128 - L1MB2 LINE L1 -14 6157 6105 2 1742 347 228 143 38 chrX 151655168 151655273 -14995023 - PB1D7 SINE Alu -4 116 1 2 1742 837 264 31 94 chrX 151655273 151655604 -14994692 - L1MB2 LINE L1 -67 6104 5801 2 1742 1265 49 0 0 chrX 151655604 151655746 -14994550 + B1_Mm SINE Alu 1 142 -5 2 1742 234 81 0 0 chrX 151655746 151655783 -14994513 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 2 1742 38781 32 1 0 chrX 151655866 151662918 -14987378 - L1Md_T LINE L1 0 6585 1 2 1742 611 188 45 73 chrX 151662966 151663144 -14987152 - L1MB2 LINE L1 -526 5642 5470 2 1742 1340 27 0 0 chrX 151663154 151663301 -14986995 + B1_Mm SINE Alu 1 147 0 2 1742 26 0 0 0 chrX 151663301 151663327 -14986969 + AT_rich Low_complexity Low_complexity 1 26 0 2 1742 4167 142 34 20 chrX 151663347 151664030 -14986266 + RLTR17 LTR ERVK 1 692 0 2 1742 1253 42 14 0 chrX 151664091 151664235 -14986061 - B1_Mm SINE Alu 0 147 2 2 1742 260 218 36 0 chrX 151664610 151664665 -14985631 + ID2 SINE ID 1 57 -26 2 1742 1022 249 66 52 chrX 151664674 151664962 -14985334 + B4A SINE B4 1 292 0 2 1742 4646 37 9 2 chrX 151665923 151666459 -14983837 + L1Md_F3 LINE L1 6045 6584 0 2 1742 405 0 0 0 chrX 151666553 151666598 -14983698 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 2 1742 234 0 0 0 chrX 151666631 151666657 -14983639 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 2 1742 286 266 31 0 chrX 151666657 151666721 -14983575 - ID2 SINE ID -6 77 12 2 1742 2499 186 43 16 chrX 151666817 151667411 -14982885 - Lx9 LINE L1 -36 7608 6976 2 1742 301 222 16 0 chrX 151667411 151667474 -14982822 + ORR1D1 LTR MaLR 2 65 -309 2 1742 896 0 10 0 chrX 151667477 151667581 -14982715 + (TTC)n Simple_repeat Simple_repeat 2 106 0 2 1742 1155 49 0 0 chrX 151667581 151667725 -14982571 - B1_Mus2 SINE Alu -2 145 2 2 1742 1329 122 59 4 chrX 151667767 151668006 -14982290 - L1_Mur3 LINE L1 -3087 2793 2542 2 1742 2122 150 58 26 chrX 151668004 151668108 -14982188 - L1_Mur3 LINE L1 -3459 2421 2309 2 1742 2250 138 67 11 chrX 151668108 151668481 -14981815 - ORR1B1 LTR MaLR 0 394 1 2 1742 2122 150 58 26 chrX 151668481 151668842 -14981454 - L1_Mur3 LINE L1 -3572 2308 1941 2 1742 2587 194 98 53 chrX 151668842 151669283 -14981013 + RMER19C LTR ERVK 1 470 -141 2 1742 2195 30 0 15 chrX 151669283 151669551 -14980745 - L1Md_F2 LINE L1 -8 6574 6311 2 1742 2587 194 98 53 chrX 151669551 151669692 -14980604 + RMER19C LTR ERVK 471 609 -2 2 1742 2646 178 49 71 chrX 151669694 151669951 -14980345 - L1_Mur3 LINE L1 -3934 1946 1680 2 1742 252 0 0 0 chrX 151669951 151669979 -14980317 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 1742 2646 178 49 71 chrX 151669979 151670054 -14980242 - L1_Mur3 LINE L1 -4201 1679 1610 2 1742 188 35 35 0 chrX 151670054 151670083 -14980213 + (TTG)n Simple_repeat Simple_repeat 1 30 0 2 1742 885 40 194 0 chrX 151670091 151670215 -14980081 - B1_Mus1 SINE Alu 0 148 1 2 1742 2646 209 70 44 chrX 151670215 151670964 -14979332 - L1_Mur3 LINE L1 -4271 1609 855 2 1742 392 311 24 18 chrX 151671302 151671469 -14978827 - L1_Mur3 LINE L1 -6882 846 679 2 1742 620 148 0 22 chrX 151671474 151671612 -14978684 - L1_Rod LINE L1 -4123 1724 1590 2 1742 751 222 216 21 chrX 151671612 151671782 -14978514 + ORR1C2 LTR MaLR 1 190 -194 2 1742 801 71 0 0 chrX 151671782 151671895 -14978401 + (TC)n Simple_repeat Simple_repeat 2 114 0 2 1742 751 176 640 8 chrX 151671895 151672021 -14978275 + ORR1C2 LTR MaLR 191 384 0 2 1742 1249 115 15 30 chrX 151672912 151673110 -14977186 - B2_Mm2 SINE B2 0 195 1 3 1742 12014 36 2 1 chrX 151673111 151675274 -14975022 - L1Md_F3 LINE L1 -77 6507 4342 3 1742 3515 185 28 23 chrX 151675258 151675636 -14974660 - L1_Rod LINE L1 -4351 1496 1105 3 1742 1389 75 5 5 chrX 151675636 151675823 -14974473 - B2_Mm1t SINE B2 -6 187 1 3 1742 3515 211 43 32 chrX 151675823 151676444 -14973852 - L1_Rod LINE L1 -6504 1104 487 3 1742 282 320 113 0 chrX 151676458 151676555 -14973741 - PB1D7 SINE Alu -7 113 6 3 1742 218 321 167 0 chrX 151676480 151676564 -14973732 - B4A SINE B4 -113 179 82 3 1742 23 0 0 0 chrX 151676623 151676646 -14973650 + AT_rich Low_complexity Low_complexity 1 23 0 3 1742 1022 329 46 11 chrX 151676925 151677234 -14973062 + MTE2b LTR MaLR 1 319 -60 3 1742 564 56 0 0 chrX 151677234 151677306 -14972990 + (TTCC)n Simple_repeat Simple_repeat 3 74 0 3 1742 1022 329 46 11 chrX 151677306 151677362 -14972934 + MTE2b LTR MaLR 320 379 0 3 1742 216 0 0 0 chrX 151677828 151677852 -14972444 + (TTA)n Simple_repeat Simple_repeat 2 25 0 3 1742 279 0 0 0 chrX 151677852 151677883 -14972413 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1742 686 234 0 28 chrX 151677886 151678027 -14972269 - RSINE1 SINE B4 -24 141 5 3 1742 23 33 0 0 chrX 151678244 151678274 -14972022 + AT_rich Low_complexity Low_complexity 1 30 0 3 1742 376 301 35 9 chrX 151679078 151679192 -14971104 - MIR SINE MIR -64 144 28 3 1742 389 297 18 0 chrX 151679483 151679594 -14970702 - PB1D10 SINE Alu 0 117 5 3 1742 379 279 38 0 chrX 151679837 151679916 -14970380 - B1F2 SINE Alu -67 82 1 3 1742 1780 148 67 43 chrX 151680233 151680578 -14969718 + ORR1B1 LTR MaLR 42 394 0 3 1742 240 311 43 43 chrX 151681482 151681620 -14968676 + MIRb SINE MIR 64 201 -67 3 1742 191 441 0 0 chrX 151681746 151681814 -14968482 - L2b LINE L2 -21 3354 3287 3 1742 299 340 144 31 chrX 151681906 151682100 -14968196 + ID_B1 SINE B4 2 217 -7 3 1742 290 279 0 71 chrX 151682104 151682189 -14968107 + ID4 SINE ID 2 80 -3 3 1742 642 26 0 0 chrX 151682626 151682702 -14967594 + (GAAA)n Simple_repeat Simple_repeat 3 78 0 3 1742 401 238 59 0 chrX 151683581 151683682 -14966614 - PB1D10 SINE Alu -6 111 5 3 1742 213 281 18 0 chrX 151684102 151684159 -14966137 + (CAT)n Simple_repeat Simple_repeat 3 60 0 3 1742 396 59 0 0 chrX 151684165 151684216 -14966080 + (TATG)n Simple_repeat Simple_repeat 4 54 0 3 1742 286 217 29 0 chrX 151684220 151684289 -14966007 - ID4 SINE ID -10 73 3 3 1742 911 235 54 0 chrX 151685291 151685495 -14964801 - B3 SINE B2 0 216 2 3 1742 189 250 0 0 chrX 151685513 151685573 -14964723 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 1742 1487 64 0 5 chrX 151685612 151685800 -14964496 - B2_Mm1t SINE B2 -5 188 2 3 1742 21 0 0 0 chrX 151685810 151685831 -14964465 + AT_rich Low_complexity Low_complexity 1 21 0 3 1742 183 361 33 98 chrX 151686124 151686216 -14964080 + L2b LINE L2 3272 3357 -18 3 1742 357 291 34 34 chrX 151686338 151686427 -14963869 - PB1D10 SINE Alu -21 99 11 3 1742 242 250 58 0 chrX 151686559 151686611 -14963685 + ID4 SINE ID 23 77 -6 3 1742 192 256 0 0 chrX 151686997 151687036 -14963260 - MIR3 SINE MIR -13 195 157 3 1742 311 277 58 0 chrX 151687073 151687210 -14963086 + L1M4 LINE L1 5680 5824 -350 3 1742 483 273 27 9 chrX 151687210 151687321 -14962975 + RSINE1 SINE B4 2 114 -51 3 1742 624 321 72 5 chrX 151687405 151687599 -14962697 - B4 SINE B4 -2 290 84 3 1742 474 202 0 116 chrX 151687965 151688077 -14962219 - ID_B1 SINE B4 -22 202 104 3 1742 198 0 0 0 chrX 151688112 151688134 -14962162 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 3 1742 1619 17 0 0 chrX 151688143 151688323 -14961973 - B2_Mm1a SINE B2 -12 181 2 3 1742 321 257 37 12 chrX 151688793 151688879 -14961417 + PB1D10 SINE Alu 5 101 -26 3 1742 290 279 58 0 chrX 151688973 151689077 -14961219 + MER96B DNA hAT 16 125 -292 3 1742 251 284 60 0 chrX 151689054 151689121 -14961175 + MER96B DNA hAT 343 413 -4 3 1742 722 241 7 20 chrX 151689643 151689791 -14960505 + B3 SINE B2 5 150 -66 3 1742 408 55 0 0 chrX 151689812 151689867 -14960429 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1742 297 0 0 0 chrX 151689875 151689908 -14960388 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 1742 313 244 161 8 chrX 151690338 151690462 -14959834 + MIRc SINE MIR 2 144 -124 3 1742 1166 51 0 0 chrX 151691209 151691346 -14958950 - B1_Mus2 SINE Alu -10 137 1 3 1742 995 196 5 35 chrX 151691351 151691552 -14958744 - B3 SINE B2 0 216 22 3 1742 1152 230 195 3 chrX 151691587 151691884 -14958412 - ORR1D1 LTR MaLR -16 358 5 3 1742 214 241 0 53 chrX 151691875 151691932 -14958364 - ID4 SINE ID -20 63 10 3 1742 1097 246 97 63 chrX 151691932 151692354 -14957942 + RMER13A LTR ERVK 1 470 -438 3 1742 842 204 115 51 chrX 151692715 151693010 -14957286 + Lx9 LINE L1 6977 7290 -354 3 1742 547 106 0 28 chrX 151693021 151693128 -14957168 - Lx4B LINE L1 -7 7051 6948 3 1742 508 221 121 16 chrX 151693130 151693423 -14956873 + Lx9 LINE L1 7283 7641 -3 3 1742 1108 218 47 33 chrX 151693481 151693756 -14956540 + ORR1C2 LTR MaLR 1 279 -105 3 1742 689 98 34 51 chrX 151694155 151694233 -14956063 + ORR1C2 LTR MaLR 263 341 -37 3 1742 1912 145 28 16 chrX 151694233 151694556 -14955740 - ORR1A2 LTR MaLR 0 327 1 3 1742 689 98 34 51 chrX 151694556 151694595 -14955701 + ORR1C2 LTR MaLR 342 378 0 3 1742 365 261 173 80 chrX 151694600 151694750 -14955546 + B3A SINE B2 31 194 -4 3 1742 243 343 28 14 chrX 151694919 151694990 -14955306 - ID4 SINE ID -4 79 8 3 1742 479 272 14 7 chrX 151695008 151695156 -14955140 - B1F SINE Alu 0 149 1 3 1742 606 212 124 52 chrX 151695721 151695915 -14954381 - B3 SINE B2 -6 210 3 3 1742 328 202 24 37 chrX 151696276 151696358 -14953938 - ID4_ SINE ID -1 82 2 3 1742 254 296 61 10 chrX 151696403 151696502 -14953794 - B1_Mm SINE Alu -33 114 11 3 1742 343 278 83 0 chrX 151696571 151696679 -14953617 - B1F SINE Alu -13 136 20 3 1742 536 178 348 6 chrX 151697711 151697869 -14952427 - B3 SINE B2 -4 212 1 3 1742 717 186 0 15 chrX 151697891 151698022 -14952274 - B1_Mus2 SINE Alu 0 147 19 3 1742 286 302 39 103 chrX 151697936 151698038 -14952258 - MT2B LTR ERVL -344 257 167 3 1742 393 300 27 41 chrX 151698022 151698037 -14952259 - ID_B1 SINE B4 0 224 81 3 1742 374 248 6 221 chrX 151698038 151698219 -14952077 - B1_Mur1 SINE Alu -7 142 1 3 1742 286 302 39 103 chrX 151698219 151698271 -14952025 - MT2B LTR ERVL -435 166 114 3 1742 284 368 28 28 chrX 151698253 151698362 -14951934 - B1F1 SINE Alu -40 109 1 3 1742 333 19 18 36 chrX 151698516 151698572 -14951724 + (TTTTG)n Simple_repeat Simple_repeat 2 56 0 3 1742 710 241 91 6 chrX 151698896 151698928 -14951368 - B3 SINE B2 -3 213 183 3 1742 351 0 0 0 chrX 151698928 151698967 -14951329 + (TATG)n Simple_repeat Simple_repeat 4 42 0 3 1742 710 241 91 6 chrX 151698967 151699109 -14951187 - B3 SINE B2 -34 182 25 3 1742 532 206 353 6 chrX 151699110 151699266 -14951030 + B3 SINE B2 2 211 -5 3 1742 622 156 0 58 chrX 151699433 151699624 -14950672 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 1742 227 267 91 26 chrX 151699746 151699823 -14950473 - ID4 SINE ID -1 82 1 3 1742 243 0 0 0 chrX 151700320 151700347 -14949949 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1742 630 249 51 23 chrX 151700522 151700699 -14949597 + B3A SINE B2 1 182 -16 3 1742 619 265 8 0 chrX 151700709 151700841 -14949455 - ID_B1 SINE B4 -90 134 2 3 1742 935 264 87 19 chrX 151701147 151701413 -14948883 - B4A SINE B4 -3 289 6 3 1742 242 89 0 43 chrX 151701465 151701512 -14948784 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 3 1742 346 237 40 40 chrX 151701517 151701618 -14948678 - RSINE1 SINE B4 -4 161 61 3 1742 324 0 0 0 chrX 151702352 151702388 -14947908 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1742 255 228 0 109 chrX 151702388 151702452 -14947844 - PB1D9 SINE Alu -10 110 54 3 1742 27 0 0 0 chrX 151702464 151702491 -14947805 + AT_rich Low_complexity Low_complexity 1 27 0 3 1742 533 197 78 210 chrX 151702915 151703172 -14947124 + ID_B1 SINE B4 2 224 0 3 1742 180 0 0 0 chrX 151703486 151703506 -14946790 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1742 2069 98 23 7 chrX 151703637 151703945 -14946351 - ORR1A2 LTR MaLR -8 319 7 3 1742 601 269 53 42 chrX 151704411 151704601 -14945695 - B3A SINE B2 -5 193 2 3 1742 306 0 0 0 chrX 151704963 151704997 -14945299 + (GA)n Simple_repeat Simple_repeat 1 34 0 3 1742 1110 296 29 0 chrX 151705848 151706060 -14944236 + B4 SINE B4 3 215 -77 3 1742 342 0 0 0 chrX 151706060 151706098 -14944198 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 3 1742 1110 296 29 0 chrX 151706098 151706165 -14944131 + B4 SINE B4 216 288 -4 3 1742 180 273 0 0 chrX 151706851 151706884 -14943412 - MIR SINE MIR -138 70 38 3 1742 662 274 40 0 chrX 151706910 151707111 -14943185 - L1_Rod LINE L1 -6874 298 90 3 1742 228 264 65 65 chrX 151707111 151707188 -14943108 - B3 SINE B2 -138 78 2 3 1742 248 139 0 0 chrX 151707276 151707312 -14942984 + tRNA-Lys-AAG tRNA tRNA 2 37 -39 3 1742 323 273 63 21 chrX 151707722 151707864 -14942432 - L1MB8 LINE L1 0 6184 6037 3 1742 467 316 57 11 chrX 151708269 151708445 -14941851 + Lx8 LINE L1 7040 7223 -250 3 1742 944 141 0 6 chrX 151708509 151708673 -14941623 + (TTCC)n Simple_repeat Simple_repeat 2 164 0 3 1742 423 98 0 0 chrX 151708673 151708734 -14941562 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 1742 1754 155 27 57 chrX 151708772 151708825 -14941471 - ORR1A3 LTR MaLR 0 346 306 3 1742 1107 125 22 5 chrX 151708825 151709010 -14941286 - B2_Mm2 SINE B2 -7 188 1 3 1742 1754 155 27 57 chrX 151709010 151709277 -14941019 - ORR1A3 LTR MaLR -41 305 36 3 1742 4228 127 180 16 chrX 151709277 151710095 -14940201 - ORR1A3-int LTR MaLR -2 1790 839 3 1742 2646 121 47 0 chrX 151710095 151710518 -14939778 - ORR1A3-int LTR MaLR -1520 443 1 3 1742 1923 142 52 0 chrX 151710518 151710828 -14939468 - ORR1A3 LTR MaLR 0 326 1 3 1742 577 196 0 29 chrX 151710828 151710933 -14939363 - B1_Mur3 SINE Alu -39 110 9 4 1742 259 288 14 0 chrX 151711001 151711074 -14939222 + RMER15 LTR ERVL 396 469 -106 4 1742 302 210 171 32 chrX 151711124 151711247 -14939049 - L1MC4 LINE L1 -139 7903 7764 4 1742 202 118 0 29 chrX 151711522 151711557 -14938739 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1742 814 283 58 0 chrX 151711580 151711785 -14938511 - B4A SINE B4 -2 290 74 4 1742 508 265 131 36 chrX 151711818 151712193 -14938103 - L1MC4 LINE L1 -1075 6967 6526 4 1742 203 103 0 25 chrX 151713639 151713646 -14936650 + (TAAAA)n Simple_repeat Simple_repeat 2 8 0 4 1742 1159 68 0 7 chrX 151713646 151713794 -14936502 + B1_Mus2 SINE Alu 1 147 0 4 1742 203 103 0 25 chrX 151713794 151713826 -14936470 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 4 1742 380 267 130 57 chrX 151715224 151715347 -14934949 + B3 SINE B2 9 140 -76 4 1742 2597 151 0 7 chrX 151715347 151715761 -14934535 + MTC LTR MaLR 2 412 -9 4 1742 459 298 28 0 chrX 151715876 151716017 -14934279 + B1F1 SINE Alu 5 149 0 4 1742 482 272 55 113 chrX 151716984 151717285 -14933011 - MLT1B LTR MaLR 0 390 115 4 1742 279 208 0 0 chrX 151717295 151717343 -14932953 - ID_B1 SINE B4 -2 222 175 4 1742 281 315 63 0 chrX 151717442 151717553 -14932743 - PB1D7 SINE Alu 0 120 3 4 1742 489 307 0 0 chrX 151717596 151717710 -14932586 - PB1D7 SINE Alu -6 114 1 4 1742 279 294 12 12 chrX 151717832 151717918 -14932378 - B4 SINE B4 -206 86 1 4 1742 300 205 83 12 chrX 151717918 151718002 -14932294 - Lx8 LINE L1 -455 7018 6929 4 1742 474 269 41 32 chrX 151718046 151718169 -14932127 + ID_B1 SINE B4 100 223 -1 4 1742 332 281 12 0 chrX 151718617 151718699 -14931597 - B4 SINE B4 -209 83 1 4 1742 254 246 13 26 chrX 151718750 151718839 -14931457 + CT-rich Low_complexity Low_complexity 1 87 0 4 1742 404 258 132 8 chrX 151718839 151718968 -14931328 - B1_Mur4 SINE Alu -5 145 1 4 1742 479 238 249 6 chrX 151719477 151719646 -14930650 + B3 SINE B2 1 210 -6 4 1742 204 40 0 0 chrX 151720031 151720056 -14930240 + (TCC)n Simple_repeat Simple_repeat 3 27 0 4 1742 427 0 171 19 chrX 151720118 151720129 -14930167 + polypyrimidine Low_complexity Low_complexity 115 124 0 4 1742 1337 46 17 0 chrX 151720129 151720304 -14929992 + (TCTCC)n Simple_repeat Simple_repeat 3 180 0 4 1742 427 0 171 19 chrX 151720304 151720397 -14929899 + CT-rich Low_complexity Low_complexity 4 114 0 4 1742 304 293 99 20 chrX 151720472 151720573 -14929723 - B1F1 SINE Alu -39 110 2 4 1742 950 261 113 36 chrX 151721166 151722106 -14928190 - L1MA6 LINE L1 -292 6008 4989 4 1742 800 179 27 33 chrX 151722106 151722256 -14928040 - B1_Mur4 SINE Alu -1 149 1 4 1742 950 228 82 61 chrX 151722256 151722355 -14927941 - L1MA6 LINE L1 -1155 4988 4888 4 1742 442 158 26 0 chrX 151722476 151722552 -14927744 - ID_B1 SINE B4 -2 222 145 4 1742 325 248 239 0 chrX 151722552 151722589 -14927707 - B1F SINE Alu -1 148 9 4 1742 479 298 38 8 chrX 151722615 151722747 -14927549 - B1F1 SINE Alu -12 137 2 4 1742 407 167 44 0 chrX 151722914 151723004 -14927292 - L1MB8 LINE L1 -6 6172 6079 4 1742 213 65 0 0 chrX 151723453 151723484 -14926812 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1742 459 278 36 36 chrX 151723486 151723598 -14926698 - RSINE1 SINE B4 -43 122 11 4 1742 312 277 79 18 chrX 151723641 151723755 -14926541 - L1MC5 LINE L1 -747 7214 7094 4 1742 648 200 90 13 chrX 151724087 151724258 -14926038 + B3 SINE B2 1 175 -20 4 1742 405 0 0 0 chrX 151724380 151724425 -14925871 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1742 6556 121 9 18 chrX 151724605 151725728 -14924568 - L1_Mur2 LINE L1 -561 5316 4204 4 1742 857 138 243 0 chrX 151725933 151726114 -14924182 + URR1A DNA MER1_type 1 225 -1 4 1742 431 320 59 39 chrX 151726147 151726300 -14923996 - RSINE1 SINE B4 -7 158 3 4 1742 1289 245 98 19 chrX 151726325 151726641 -14923655 - MTE2a LTR MaLR 0 379 39 4 1742 549 198 0 0 chrX 151726858 151726979 -14923317 + (TA)n Simple_repeat Simple_repeat 1 121 0 4 1742 209 197 15 29 chrX 151727105 151727173 -14923123 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 4 1742 257 305 44 68 chrX 151727201 151727496 -14922800 - L1MC4 LINE L1 -59 7983 7696 4 1742 814 184 205 0 chrX 151727532 151727717 -14922579 - URR1A DNA MER1_type 0 226 4 4 1742 471 273 66 0 chrX 151727902 151728023 -14922273 - ID_B1 SINE B4 -8 216 88 4 1742 341 251 39 1 chrX 151728331 151728417 -14921879 - PB1D7 SINE Alu -56 93 6 4 1742 263 248 99 54 chrX 151728659 151728770 -14921526 - Charlie19a DNA Charlie -36 350 235 4 1742 346 274 56 8 chrX 151728798 151728923 -14921373 - Lx8 LINE L1 -84 7389 7259 4 1742 259 298 20 60 chrX 151728963 151729055 -14921241 - Charlie19a DNA Charlie -147 239 152 4 1742 819 149 40 16 chrX 151729055 151729234 -14921062 + B3 SINE B2 3 192 -3 4 1742 917 66 8 0 chrX 151729237 151729359 -14920937 + B1_Mus1 SINE Alu 26 148 0 4 1742 405 54 0 0 chrX 151729415 151729471 -14920825 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1742 246 306 14 0 chrX 151729471 151729543 -14920753 - ID4 SINE ID -10 73 1 4 1742 328 273 0 0 chrX 151731349 151731415 -14918881 - ID4_ SINE ID -16 67 2 4 1742 325 279 0 0 chrX 151731427 151731495 -14918801 - ID4_ SINE ID -14 69 2 4 1742 1896 44 0 12 chrX 151733537 151733789 -14916507 - L1Md_F2 LINE L1 -617 5965 5717 4 1742 4908 55 0 2 chrX 151733790 151734390 -14915906 + L1Md_F2 LINE L1 5972 6570 -12 4 1742 600 218 111 39 chrX 151734843 151734996 -14915300 + ID_B1 SINE B4 2 165 -59 4 1742 746 187 16 8 chrX 151734997 151735121 -14915175 + B1_Mur2 SINE Alu 13 137 -12 4 1742 438 20 0 0 chrX 151735121 151735172 -14915124 + (TAA)n Simple_repeat Simple_repeat 2 52 0 4 1742 290 218 55 0 chrX 151735176 151735231 -14915065 + ID_B1 SINE B4 161 218 -6 4 1742 205 157 78 0 chrX 151735242 151735293 -14915003 + T-rich Low_complexity Low_complexity 1 55 0 4 1742 1188 61 0 0 chrX 151735743 151735890 -14914406 - B1_Mm SINE Alu 0 147 1 4 1742 466 284 0 9 chrX 151736861 151736971 -14913325 - PB1D10 SINE Alu -7 110 2 4 1742 418 165 80 34 chrX 151737255 151737343 -14912953 - B1_Mur2 SINE Alu -11 138 47 4 1742 198 150 0 0 chrX 151737690 151737730 -14912566 + (A)n Simple_repeat Simple_repeat 1 40 0 4 1742 382 142 53 53 chrX 151737769 151737940 -14912356 + (TATAA)n Simple_repeat Simple_repeat 4 174 0 4 1742 284 132 51 32 chrX 151737979 151738136 -14912160 + (TA)n Simple_repeat Simple_repeat 1 160 0 4 1742 250 184 60 16 chrX 151738201 151738520 -14911776 + (TA)n Simple_repeat Simple_repeat 1 333 0 4 1742 94 33 0 0 chrX 151738555 151738677 -14911619 + AT_rich Low_complexity Low_complexity 1 122 0 4 1742 755 217 94 16 chrX 151741024 151741216 -14909080 + B3 SINE B2 5 211 -5 4 1742 1361 82 5 11 chrX 151741218 151741404 -14908892 - B2_Mm1t SINE B2 -8 185 1 4 1742 1022 260 184 41 chrX 151741658 151742320 -14907976 - L1MA5 LINE L1 -6 6294 5538 4 1742 22 88 0 0 chrX 151742432 151742489 -14907807 + AT_rich Low_complexity Low_complexity 1 57 0 4 1742 21 57 0 0 chrX 151742584 151742619 -14907677 + AT_rich Low_complexity Low_complexity 1 35 0 4 1742 768 244 88 5 chrX 151742767 151742961 -14907335 - B3 SINE B2 -6 210 1 4 1742 1499 154 97 99 chrX 151742985 151743145 -14907151 - RLTR14 LTR ERV1 0 382 233 4 1742 249 83 0 0 chrX 151743145 151743181 -14907115 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 4 1742 1499 154 97 99 chrX 151743181 151743403 -14906893 - RLTR14 LTR ERV1 -150 232 1 4 1742 1244 143 23 54 chrX 151743403 151743661 -14906635 - RLTR14-int LTR ERV1 0 5317 5068 4 1742 398 88 15 0 chrX 151743668 151743736 -14906560 + (TC)n Simple_repeat Simple_repeat 1 69 0 4 1742 7627 172 47 41 chrX 151743736 151747548 -14902748 - RLTR14-int LTR ERV1 -239 5078 1285 4 1742 4116 185 100 108 chrX 151747633 151748477 -14901819 - RLTR14-int LTR ERV1 -4030 1287 509 4 1742 1604 32 0 16 chrX 151748477 151748670 -14901626 - B2_Mm1t SINE B2 -3 190 1 4 1742 4116 185 100 108 chrX 151748670 151748732 -14901564 - RLTR14-int LTR ERV1 -4809 508 449 4 1742 981 132 0 0 chrX 151748732 151748899 -14901397 + (CA)n Simple_repeat Simple_repeat 2 168 0 4 1742 4116 185 100 108 chrX 151748899 151749288 -14901008 - RLTR14-int LTR ERV1 -4869 448 1 4 1742 1952 141 6 54 chrX 151749415 151749746 -14900550 - RLTR14 LTR ERV1 -67 315 1 4 1742 1152 230 113 7 chrX 151749753 151750048 -14900248 - MTD LTR MaLR 0 419 89 4 1742 1015 115 0 0 chrX 151750098 151750237 -14900059 + B1_Mus1 SINE Alu 1 139 -9 4 1742 348 238 25 0 chrX 151750303 151750383 -14899913 - Lx8 LINE L1 -381 7092 7011 4 1742 522 0 0 0 chrX 151750467 151750525 -14899771 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 1742 600 319 44 56 chrX 151750581 151750833 -14899463 + B4A SINE B4 4 252 -40 4 1742 3025 128 18 13 chrX 151751044 151751850 -14898446 - L1VL4 LINE L1 -4439 1444 193 4 1742 202 95 0 45 chrX 151751948 151751992 -14898304 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 1742 3188 42 0 0 chrX 151752135 151752519 -14897777 - L1Md_T LINE L1 -1 6581 6198 4 1742 520 218 30 0 chrX 151752561 151752662 -14897634 + ID_B1 SINE B4 121 224 0 4 1742 220 283 0 0 chrX 151752802 151752855 -14897441 + CT-rich Low_complexity Low_complexity 3 55 0 4 1742 347 248 46 28 chrX 151752926 151753034 -14897262 - PB1D10 SINE Alu -5 112 3 4 1742 207 244 0 0 chrX 151753111 151753189 -14897107 + (TA)n Simple_repeat Simple_repeat 1 78 0 4 1742 508 287 20 0 chrX 151753512 151753662 -14896634 + Lx5 LINE L1 6898 7050 0 4 1742 1356 283 56 52 chrX 151753851 151754105 -14896191 - RMER5 LTR ERV1 0 534 272 4 1742 842 130 215 31 chrX 151754105 151754296 -14896000 + URR1A DNA MER1_type 1 226 0 4 1742 1356 283 56 52 chrX 151754296 151754541 -14895755 - RMER5 LTR ERV1 -263 271 33 4 1742 26 0 0 0 chrX 151754546 151754572 -14895724 + GC_rich Low_complexity Low_complexity 1 26 0 4 1742 263 140 20 20 chrX 151754829 151754880 -14895416 - MER20 DNA MER1_type 0 219 169 4 1742 735 212 170 0 chrX 151754890 151755055 -14895241 - B3 SINE B2 -21 195 3 4 1742 298 221 99 49 chrX 151755378 151755459 -14894837 - MER20 DNA MER1_type -42 177 93 4 1742 304 239 14 29 chrX 151755469 151755538 -14894758 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 4 1742 791 176 34 45 chrX 151755571 151755749 -14894547 - RLTR14-int LTR ERV1 -4433 884 709 5 1742 646 238 86 26 chrX 151755962 151756113 -14894183 + B3A SINE B2 1 160 -38 5 1742 360 0 0 0 chrX 151756116 151756156 -14894140 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1742 245 179 73 49 chrX 151756384 151756466 -14893830 - Lx9 LINE L1 -1 7643 7560 5 1742 266 262 103 35 chrX 151757186 151757273 -14893023 + PB1D10 SINE Alu 25 117 0 5 1742 216 0 0 0 chrX 151757641 151757665 -14892631 + (TC)n Simple_repeat Simple_repeat 2 25 0 5 1742 396 171 0 0 chrX 151757665 151757747 -14892549 + (TA)n Simple_repeat Simple_repeat 2 83 0 5 1742 261 312 208 47 chrX 151757937 151758149 -14892147 + MIRb SINE MIR 20 265 -3 5 1742 1130 75 0 7 chrX 151758212 151758359 -14891937 - B1_Mm SINE Alu 0 147 2 5 1742 1264 51 22 38 chrX 151758840 151759006 -14891290 + B2_Mm2 SINE B2 2 169 -26 5 1742 180 0 0 0 chrX 151759006 151759026 -14891270 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 5 1742 1264 51 22 38 chrX 151759026 151759042 -14891254 + B2_Mm2 SINE B2 170 181 -14 5 1742 425 348 29 7 chrX 151759319 151759458 -14890838 - B1F1 SINE Alu -7 142 1 5 1742 30 77 0 0 chrX 151759609 151759674 -14890622 + AT_rich Low_complexity Low_complexity 1 65 0 5 1742 236 221 85 61 chrX 151759685 151759767 -14890529 - Charlie24 DNA MER1_type -12 2438 2355 5 1742 748 165 70 28 chrX 151759964 151760107 -14890189 + B1_Mur4 SINE Alu 2 150 0 5 1742 334 169 151 43 chrX 151760281 151760374 -14889922 + RSINE1 SINE B4 2 104 -61 5 1742 1908 270 82 31 chrX 151762264 151762983 -14887313 + Lx8 LINE L1 6717 7472 -1 5 1742 616 210 85 51 chrX 151763283 151763459 -14886837 + B3A SINE B2 1 182 -16 5 1742 387 0 0 0 chrX 151763662 151763705 -14886591 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1742 497 231 146 16 chrX 151763889 151764012 -14886284 + B1_Mur4 SINE Alu 11 149 -1 5 1742 458 276 17 25 chrX 151764059 151764178 -14886118 + ID_B1 SINE B4 107 224 0 5 1742 222 146 125 0 chrX 151764348 151764396 -14885900 + PB1D9 SINE Alu 67 120 0 5 1742 230 357 113 34 chrX 151764495 151764672 -14885624 + MIR3 SINE MIR 11 201 -7 5 1742 21 36 0 0 chrX 151764730 151764758 -14885538 + AT_rich Low_complexity Low_complexity 1 28 0 5 1742 392 302 0 0 chrX 151765294 151765380 -14884916 - B1_Mur3 SINE Alu -61 88 3 5 1742 335 319 153 5 chrX 151766177 151766366 -14883930 - L1M5 LINE L1 -526 5598 5382 5 1742 1357 47 0 6 chrX 151766382 151766555 -14883741 - B2_Mm2 SINE B2 -22 173 2 5 1742 367 264 44 0 chrX 151766588 151766679 -14883617 - PB1D7 SINE Alu 0 120 26 5 1742 1127 215 34 0 chrX 151767582 151767791 -14882505 - B3 SINE B2 0 216 1 5 1742 335 280 32 11 chrX 151768037 151768131 -14882165 + MamRep38 DNA hAT 200 295 0 5 1742 48 18 0 0 chrX 151769051 151769106 -14881190 + AT_rich Low_complexity Low_complexity 1 55 0 5 1742 399 258 61 55 chrX 151769596 151769760 -14880536 - Charlie4a DNA MER1_type -27 481 317 5 1742 808 144 0 73 chrX 151770758 151770908 -14879388 + B1_Mur2 SINE Alu 9 147 -2 5 1742 1225 28 7 0 chrX 151770955 151771100 -14879196 + B1_Mm SINE Alu 2 147 0 5 1742 302 351 9 9 chrX 151771614 151771726 -14878570 + PB1D10 SINE Alu 1 112 -5 5 1742 220 195 0 0 chrX 151772805 151772846 -14877450 + (CAG)n Simple_repeat Simple_repeat 3 43 0 5 1742 770 90 121 16 chrX 151773315 151773439 -14876857 - B1_Mur3 SINE Alu -4 145 9 5 1742 972 249 0 16 chrX 151774189 151774381 -14875915 - B3 SINE B2 -27 189 1 5 1742 797 242 96 89 chrX 151776122 151776516 -14873780 - RMER10A LTR ERVL -25 417 21 5 1742 531 318 88 44 chrX 151776529 151776808 -14873488 + MLT1F1 LTR MaLR 208 521 -48 5 1742 1533 240 33 89 chrX 151776955 151777236 -14873060 - MTD LTR MaLR -14 405 128 5 1742 1494 67 62 0 chrX 151777236 151777446 -14872850 - Lx3_Mus LINE L1 -5 7004 6782 5 1742 1533 240 33 89 chrX 151777446 151777593 -14872703 - MTD LTR MaLR -292 127 1 5 1742 253 312 49 24 chrX 151777702 151777784 -14872512 + RSINE1 SINE B4 78 161 -4 5 1742 396 0 0 0 chrX 151778396 151778440 -14871856 + (GAAA)n Simple_repeat Simple_repeat 3 46 0 5 1742 1774 128 283 0 chrX 151778737 151779105 -14871191 + L1VL2 LINE L1 283 754 -5581 5 1742 286 346 47 8 chrX 151779543 151779671 -14870625 - Lx8 LINE L1 -181 7292 7160 5 1742 287 221 0 11 chrX 151780075 151780162 -14870134 + GA-rich Low_complexity Low_complexity 2 87 0 5 1742 658 204 0 0 chrX 151780279 151780387 -14869909 - B3 SINE B2 -106 110 3 5 1742 260 250 0 0 chrX 151780387 151780433 -14869863 - B1F SINE Alu -95 54 9 5 1742 750 268 100 43 chrX 151780902 151781202 -14869094 + Lx8 LINE L1 7152 7468 -5 5 1743 1003 150 155 0 chrX 151781908 151782101 -14868195 - URR1B DNA MER1_type -2 223 1 5 1743 455 0 18 0 chrX 151782713 151782768 -14867528 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1743 449 268 31 0 chrX 151782776 151782873 -14867423 - RSINE1 SINE B4 -22 143 44 5 1743 379 229 0 0 chrX 151782979 151783049 -14867247 - ID4 SINE ID -11 72 3 5 1743 815 240 33 16 chrX 151783533 151783715 -14866581 - ID_B1 SINE B4 -39 185 1 5 1743 536 265 112 75 chrX 151783719 151783901 -14866395 - L1MB8 LINE L1 -349 5829 5620 5 1743 1564 42 16 0 chrX 151783901 151784092 -14866204 - B2_Mm2 SINE B2 0 195 2 5 1743 536 265 112 75 chrX 151784092 151784210 -14866086 - L1MB8 LINE L1 -559 5619 5520 5 1743 1354 72 16 11 chrX 151784210 151784393 -14865903 - B2_Mm2 SINE B2 -11 184 1 5 1743 536 265 112 75 chrX 151784393 151784550 -14865746 - L1MB8 LINE L1 -659 5519 5353 5 1743 3068 69 5 5 chrX 151784550 151784955 -14865341 - L1Md_F2 LINE L1 0 6582 6178 5 1743 536 265 112 75 chrX 151784955 151785005 -14865291 - L1MB8 LINE L1 -826 5352 5301 5 1743 555 364 7 0 chrX 151785045 151785196 -14865100 - RSINE1 SINE B4 -13 152 1 5 1743 454 265 8 33 chrX 151785242 151785363 -14864933 - PB1D7 SINE Alu -1 119 2 5 1743 227 346 142 0 chrX 151785488 151785615 -14864681 - B1F SINE Alu -3 146 2 5 1743 354 359 14 0 chrX 151785631 151785776 -14864520 - L1MB8 LINE L1 -976 5170 5024 5 1743 1679 244 44 15 chrX 151785850 151786257 -14864039 + MTD LTR MaLR 1 419 0 5 1743 3945 61 0 0 chrX 151786357 151786846 -14863450 - L1_Mus1 LINE L1 0 6567 6079 5 1743 257 284 30 0 chrX 151787128 151787195 -14863101 + CT-rich Low_complexity Low_complexity 4 72 0 5 1743 210 35 82 49 chrX 151787357 151787396 -14862900 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 5 1743 1106 82 7 0 chrX 151787396 151787542 -14862754 + B1_Mm SINE Alu 1 147 0 5 1743 210 35 82 49 chrX 151787542 151787563 -14862733 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 5 1743 449 302 24 111 chrX 151787622 151787875 -14862421 - Lx8 LINE L1 -318 7155 6925 5 1743 623 261 8 0 chrX 151787880 151788010 -14862286 - B1_Mur2 SINE Alu -18 131 1 5 1743 236 259 0 0 chrX 151788190 151788279 -14862017 + (TATG)n Simple_repeat Simple_repeat 1 89 0 5 1743 338 316 0 12 chrX 151788281 151788361 -14861935 - B4 SINE B4 -2 290 212 5 1743 762 221 7 0 chrX 151788386 151788531 -14861765 - B1_Mur4 SINE Alu 0 150 5 5 1743 543 308 93 33 chrX 151788582 151788779 -14861517 - B3A SINE B2 -13 203 1 5 1743 860 87 20 7 chrX 151789744 151789894 -14860402 + (CA)n Simple_repeat Simple_repeat 2 153 0 5 1743 694 293 15 35 chrX 151790398 151790596 -14859700 - RMER15 LTR ERVL -35 540 347 5 1743 1704 281 12 33 chrX 151791447 151791929 -14858367 + Lx6 LINE L1 6954 7425 -35 5 1743 252 0 0 0 chrX 151791929 151791957 -14858339 + (TAA)n Simple_repeat Simple_repeat 2 29 0 5 1743 2116 126 50 28 chrX 151792752 151793111 -14857185 - ORR1B2 LTR MaLR 0 367 1 5 1743 1237 285 68 23 chrX 151793111 151793463 -14856833 + MTEb LTR MaLR 4 371 -8 5 1743 22 35 0 0 chrX 151793907 151793936 -14856360 + AT_rich Low_complexity Low_complexity 1 29 0 5 1743 183 72 0 67 chrX 151794008 151794053 -14856243 + (CAAAC)n Simple_repeat Simple_repeat 5 46 0 5 1743 2322 135 54 0 chrX 151794252 151794622 -14855674 + ORR1B1 LTR MaLR 1 390 -4 5 1743 319 295 33 0 chrX 151794671 151794772 -14855524 - ID4 SINE ID -37 115 14 5 1743 226 232 107 82 chrX 151794765 151794887 -14855409 + YREP_Mm Unknown Unknown 141 265 -1547 5 1743 445 200 20 31 chrX 151794800 151794898 -14855398 - ID_B1 SINE B4 -6 218 122 5 1743 1185 49 7 0 chrX 151794946 151795089 -14855207 - B1_Mus1 SINE Alu 0 148 5 5 1743 774 309 28 14 chrX 151795296 151795578 -14854718 + B4A SINE B4 2 287 -5 5 1743 227 247 0 92 chrX 151796055 151796153 -14854143 - Lx8 LINE L1 -4 7469 7381 5 1743 320 0 0 24 chrX 151796408 151796449 -14853847 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1743 207 0 0 0 chrX 151796540 151796563 -14853733 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 1743 483 100 0 0 chrX 151796563 151796632 -14853664 + (CA)n Simple_repeat Simple_repeat 2 71 0 5 1743 308 261 209 19 chrX 151796640 151796898 -14853398 - L1MA9 LINE L1 -81 6231 5925 5 1743 5316 106 9 24 chrX 151797119 151797912 -14852384 - Lx3B LINE L1 -3 6970 6190 5 1743 485 99 21 32 chrX 151797931 151798025 -14852271 + Lx3B LINE L1 6098 6190 -783 5 1743 246 241 34 17 chrX 151798025 151798084 -14852212 - MLT1B LTR MaLR -37 337 278 5 1743 347 291 54 151 chrX 151798175 151798341 -14851955 - MLT1B LTR MaLR -88 302 153 5 1743 1137 96 0 0 chrX 151798482 151798660 -14851636 + (GA)n Simple_repeat Simple_repeat 1 178 0 5 1743 562 274 19 6 chrX 151798856 151799014 -14851282 - MLT1B LTR MaLR -228 162 3 5 1743 2225 236 116 17 chrX 151799254 151800097 -14850199 - L1MA9 LINE L1 -66 6246 5320 5 1743 287 119 15 106 chrX 151800114 151800137 -14850159 - RMER15 LTR ERVL -113 462 446 5 1743 3184 43 5 5 chrX 151800137 151800533 -14849763 + MTA_Mm LTR MaLR 1 396 0 5 1743 287 119 15 106 chrX 151800533 151800575 -14849721 - RMER15 LTR ERVL -130 445 404 5 1743 241 290 124 48 chrX 151800620 151800725 -14849571 - Lx8 LINE L1 -229 7244 7132 5 1743 966 292 56 0 chrX 151800743 151801048 -14849248 - Lx8 LINE L1 -292 7181 6860 5 1743 730 271 71 20 chrX 151801160 151801555 -14848741 - L1M3 LINE L1 -985 5155 4741 6 1743 305 385 144 0 chrX 151801960 151802134 -14848162 + LTR75 LTR ERVL 30 228 -334 6 1743 1022 263 20 40 chrX 151802284 151802581 -14847715 - Lx8 LINE L1 -133 7340 7050 6 1743 437 286 0 0 chrX 151802578 151802697 -14847599 + Lx8 LINE L1 6736 6854 -619 6 1743 655 206 76 0 chrX 151802720 151802851 -14847445 + B1_Mm SINE Alu 4 144 -3 6 1743 354 138 0 0 chrX 151802852 151802910 -14847386 + (ATG)n Simple_repeat Simple_repeat 3 60 0 6 1743 371 288 0 39 chrX 151803462 151803592 -14846704 + Lx8 LINE L1 6872 6996 -477 6 1743 1336 192 88 23 chrX 151803592 151803943 -14846353 + ORR1D1 LTR MaLR 1 374 0 6 1743 341 292 52 0 chrX 151803972 151804068 -14846228 + MLT2B3 LTR ERVL 1 101 -453 6 1743 301 278 87 94 chrX 151804068 151804099 -14846197 + MTEb LTR MaLR 1 126 -253 6 1743 228 330 51 17 chrX 151804136 151804253 -14846043 + MTEb LTR MaLR 77 197 -162 6 1743 459 82 0 0 chrX 151804409 151804482 -14845814 + (TG)n Simple_repeat Simple_repeat 2 74 0 6 1743 483 269 0 27 chrX 151804489 151804600 -14845696 - B3A SINE B2 -44 154 47 6 1743 1150 75 7 0 chrX 151804620 151804766 -14845530 - B1_Mm SINE Alu 0 147 1 6 1743 678 184 72 33 chrX 151804828 151804980 -14845316 + ORR1D1 LTR MaLR 3 160 -214 6 1743 429 36 0 0 chrX 151804997 151805052 -14845244 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 6 1743 702 109 31 0 chrX 151805094 151805222 -14845074 - RLTR28 LTR ERVL -43 481 350 6 1743 465 250 95 7 chrX 151805231 151805368 -14844928 + ORR1D1 LTR MaLR 211 359 -35 6 1743 660 181 17 0 chrX 151805378 151805494 -14844802 - B3A SINE B2 -72 126 9 6 1743 1719 183 28 25 chrX 151805856 151806214 -14844082 - RLTR28 LTR ERVL 0 524 166 6 1743 978 125 139 16 chrX 151806190 151806377 -14843919 + URR1A DNA MER1_type 12 221 -5 6 1743 1369 197 76 95 chrX 151806827 151807197 -14843099 + RMER15 LTR ERVL 1 363 -212 6 1743 307 191 176 0 chrX 151808179 151808247 -14842049 - ID4 SINE ID -1 82 3 6 1743 1286 170 0 39 chrX 151808362 151808595 -14841701 - URR1B DNA MER1_type 0 225 2 6 1743 1340 85 11 0 chrX 151808886 151809075 -14841221 - B2_Mm1t SINE B2 -1 192 2 6 1743 5078 113 5 18 chrX 151809381 151810141 -14840155 - Lx2 LINE L1 0 6997 6248 6 1743 441 174 360 18 chrX 151811030 151811141 -14839155 + B1_Mur3 SINE Alu 1 149 0 6 1743 215 79 26 0 chrX 151811142 151811180 -14839116 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 6 1743 923 194 77 20 chrX 151811186 151811384 -14838912 + B3 SINE B2 28 216 0 6 1743 1214 244 118 83 chrX 151811552 151811580 -14838716 - MT2A LTR ERVL 0 533 518 6 1743 1376 145 18 5 chrX 151811580 151811802 -14838494 - URR1B DNA MER1_type 0 225 1 6 1743 1214 244 118 83 chrX 151811802 151812288 -14838008 - MT2A LTR ERVL -16 517 1 6 1743 327 240 80 0 chrX 151812600 151812675 -14837621 - ID4_ SINE ID -2 81 1 6 1743 787 242 42 16 chrX 151812902 151813081 -14837215 + B3A SINE B2 1 186 -12 6 1743 390 21 0 0 chrX 151813081 151813128 -14837168 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1743 787 242 42 16 chrX 151813128 151813141 -14837155 + B3A SINE B2 187 198 0 6 1743 29 70 0 0 chrX 151813193 151813250 -14837046 + AT_rich Low_complexity Low_complexity 1 57 0 6 1743 320 221 68 54 chrX 151813330 151813478 -14836818 - L1MEc LINE L1 -4927 1473 1324 6 1743 555 301 7 1 chrX 151813501 151813631 -14836665 + B1F SINE Alu 3 139 -11 6 1743 384 103 0 0 chrX 151813631 151813689 -14836607 + (CGAAA)n Simple_repeat Simple_repeat 3 60 0 6 1743 720 0 0 0 chrX 151813691 151813771 -14836525 + (CAAAG)n Simple_repeat Simple_repeat 2 81 0 6 1743 299 296 0 24 chrX 151813775 151813858 -14836438 + ID SINE ID 3 83 -141 6 1743 244 346 0 19 chrX 151813858 151813878 -14836418 + BC1_Mm scRNA scRNA 3 103 -49 6 1743 249 281 51 12 chrX 151813889 151814003 -14836293 + MIRb SINE MIR 78 193 -69 6 1743 278 371 77 29 chrX 151814077 151814381 -14835915 + MLT1F LTR MaLR 139 532 -37 6 1743 2143 200 3 8 chrX 151814482 151814860 -14835436 + MTD LTR MaLR 5 380 -39 6 1743 549 271 24 50 chrX 151814831 151815035 -14835261 + ORR1D2 LTR MaLR 175 377 -7 6 1743 1721 251 68 34 chrX 151815038 151815732 -14834564 - L1_Rod LINE L1 -32 5848 5128 6 1743 4096 55 8 0 chrX 151815732 151816240 -14834056 - L1_Mus1 LINE L1 0 6567 6056 6 1743 1614 284 49 54 chrX 151816240 151816305 -14833991 - L1_Rod LINE L1 -726 5154 5093 6 1743 1602 265 62 3 chrX 151816352 151816854 -14833442 + Lx6 LINE L1 6234 6979 -481 6 1743 1246 261 89 28 chrX 151817246 151817850 -14832446 - L1_Rod LINE L1 -815 5065 4425 6 1743 1717 254 114 5 chrX 151817850 151818456 -14831840 + L1_Mur3 LINE L1 3281 3952 -1928 6 1743 195 42 0 0 chrX 151818581 151818605 -14831691 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6 1743 496 295 19 6 chrX 151818702 151818859 -14831437 - Lx8 LINE L1 -235 7238 7080 6 1743 948 283 104 0 chrX 151818895 151819329 -14830967 + L1_Mur3 LINE L1 3951 4429 -1451 6 1743 459 267 98 56 chrX 151819361 151819504 -14830792 - B1F SINE Alu 0 149 1 6 1743 516 272 93 26 chrX 151819693 151819843 -14830453 + ID_B1 SINE B4 18 177 -47 6 1743 3145 142 36 21 chrX 151819843 151819932 -14830364 - RLTR20A LTR ERVK 0 541 441 6 1743 432 0 0 0 chrX 151819932 151819980 -14830316 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1743 3145 142 36 21 chrX 151819980 151820423 -14829873 - RLTR20A LTR ERVK -101 440 2 6 1743 363 238 124 38 chrX 151820423 151820464 -14829832 + ID_B1 SINE B4 163 212 -12 6 1743 639 0 0 0 chrX 151820464 151820535 -14829761 + (CAAAC)n Simple_repeat Simple_repeat 3 73 0 6 1743 586 257 28 7 chrX 151820897 151821038 -14829258 - MER5A1 DNA MER1_type -7 159 16 6 1743 346 262 57 19 chrX 151821220 151821325 -14828971 + PB1D10 SINE Alu 1 109 -8 6 1743 519 17 0 0 chrX 151821376 151821436 -14828860 + (TG)n Simple_repeat Simple_repeat 2 61 0 6 1743 464 267 16 41 chrX 151821438 151821559 -14828737 - B3A SINE B2 -47 151 34 6 1743 1029 272 82 53 chrX 151822304 151823125 -14827171 + RMER1B Other Other 47 480 -586 6 1743 2728 188 158 5 chrX 151823126 151823654 -14826642 + RMER1A Other Other 287 875 -155 6 1743 492 18 0 0 chrX 151823654 151823711 -14826585 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1743 2728 188 158 5 chrX 151823711 151823823 -14826473 + RMER1A Other Other 876 1024 -6 6 1743 681 343 106 0 chrX 151824464 151824729 -14825567 - LTR33 LTR ERVL -222 293 1 6 1743 1373 62 11 0 chrX 151825796 151825972 -14824324 - B2_Mm1t SINE B2 -14 179 2 6 1743 415 251 3 3 chrX 151825983 151826080 -14824216 - ORR1D1 LTR MaLR -262 97 1 6 1743 2914 104 31 0 chrX 151826120 151826543 -14823753 + Lx3A LINE L1 6544 6979 -2 6 1743 215 257 14 14 chrX 151826545 151826616 -14823680 + A-rich Low_complexity Low_complexity 2 72 0 6 1743 577 235 13 105 chrX 151826810 151827038 -14823258 + L1MC5 LINE L1 6700 6906 -1055 6 1743 1181 62 7 0 chrX 151827099 151827245 -14823051 - B1_Mm SINE Alu 0 147 1 6 1743 276 252 27 9 chrX 151827666 151827778 -14822518 + (TAA)n Simple_repeat Simple_repeat 2 115 0 6 1743 621 234 54 49 chrX 151827794 151827859 -14822437 - B3 SINE B2 -10 185 117 6 1743 3087 62 0 17 chrX 151827859 151828266 -14822030 - L1Md_F2 LINE L1 0 6582 6183 6 1743 621 239 0 23 chrX 151828266 151828384 -14821912 - B3 SINE B2 -100 116 1 6 1743 399 272 189 13 chrX 151828445 151828598 -14821698 - B3A SINE B2 -18 180 1 6 1743 664 290 53 7 chrX 151828969 151829250 -14821046 - MER33 DNA MER1_type 0 324 31 6 1743 268 337 59 10 chrX 151829392 151829494 -14820802 - PB1D10 SINE Alu 0 117 11 6 1743 815 239 214 42 chrX 151829970 151830222 -14820074 - Lx7 LINE L1 -2 7694 7365 6 1743 245 27 54 0 chrX 151830222 151830259 -14820037 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 1743 815 239 214 42 chrX 151830259 151830412 -14819884 - Lx7 LINE L1 -332 7364 7219 6 1743 3356 220 15 8 chrX 151830411 151831162 -14819134 + Lx9 LINE L1 6303 7058 -586 6 1743 1417 235 88 34 chrX 151831182 151831671 -14818625 - RMER4B LTR ERVK -9 576 20 6 1743 209 109 22 0 chrX 151831718 151831764 -14818532 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 6 1743 2331 185 63 15 chrX 151831785 151832311 -14817985 + Lx9 LINE L1 7087 7637 -7 6 1743 21 36 0 0 chrX 151833050 151833078 -14817218 + AT_rich Low_complexity Low_complexity 1 28 0 6 1743 320 281 52 0 chrX 151833078 151833174 -14817122 + PB1D10 SINE Alu 3 103 -14 6 1743 1238 176 80 204 chrX 151833195 151833631 -14816665 - ORR1C2 LTR MaLR 0 384 3 6 1743 1217 48 0 23 chrX 151833769 151833941 -14816355 - L1Md_F2 LINE L1 -5 6577 6410 6 1743 23 0 0 0 chrX 151834016 151834039 -14816257 + AT_rich Low_complexity Low_complexity 1 23 0 6 1743 6911 99 7 16 chrX 151834039 151835355 -14814941 - L1_Mus2 LINE L1 0 6566 5264 6 1743 5511 97 5 3 chrX 151835353 151836132 -14814164 + L1_Mus2 LINE L1 4453 5233 -650 6 1743 1379 271 95 16 chrX 151836182 151836666 -14813630 - Lx8 LINE L1 -153 7320 6799 6 1743 1176 195 0 0 chrX 151836667 151836862 -14813434 + RLTR30 LTR ERV1 1 195 -184 6 1743 2420 173 12 7 chrX 151836862 151837281 -14813015 + MTC LTR MaLR 1 421 0 6 1743 239 254 18 0 chrX 151837503 151837558 -14812738 + MurSatRep1 Unknown Unknown 229 284 -1853 6 1743 1347 287 43 9 chrX 151838537 151838885 -14811411 - MTE2b LTR MaLR -12 367 8 6 1743 3195 109 28 0 chrX 151839131 151839598 -14810698 - Lx LINE L1 -7 6647 6168 6 1743 25 31 0 0 chrX 151840126 151840158 -14810138 + AT_rich Low_complexity Low_complexity 1 32 0 6 1743 371 333 33 13 chrX 151840258 151840410 -14809886 - RSINE1 SINE B4 -6 159 5 6 1743 440 300 77 0 chrX 151840411 151840541 -14809755 + Tigger7 DNA MER2_type 167 306 -2185 6 1743 575 273 96 70 chrX 151840526 151840881 -14809415 + Tigger7 DNA MER2_type 2127 2490 -1 6 1743 693 281 35 0 chrX 151841873 151842072 -14808224 - B3 SINE B2 -10 206 1 6 1743 964 232 57 0 chrX 151842132 151842169 -14808127 - B3 SINE B2 0 216 180 6 1743 396 0 0 0 chrX 151842169 151842213 -14808083 + (TATG)n Simple_repeat Simple_repeat 4 47 0 6 1743 964 232 57 0 chrX 151842213 151842369 -14807927 - B3 SINE B2 -37 179 14 6 1743 227 361 0 0 chrX 151843339 151843400 -14806896 - ID4_ SINE ID -2 81 21 6 1743 324 0 0 0 chrX 151843467 151843503 -14806793 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1743 1489 172 231 63 chrX 151843506 151843934 -14806362 - MT2B2 LTR ERVL -83 501 2 6 1743 1213 275 52 35 chrX 151844046 151844389 -14805907 - ORR1D2 LTR MaLR 0 370 22 7 1743 307 297 40 0 chrX 151844382 151844456 -14805840 + B4A SINE B4 132 208 -84 7 1743 384 255 0 67 chrX 151844966 151845071 -14805225 + B1F2 SINE Alu 37 134 -15 7 1743 315 71 0 0 chrX 151845071 151845113 -14805183 + (CAA)n Simple_repeat Simple_repeat 1 42 0 7 1743 728 170 233 6 chrX 151845129 151845301 -14804995 + B3 SINE B2 5 215 -1 7 1743 11607 164 25 20 chrX 151845526 151847799 -14802497 + L1_Mur2 LINE L1 3012 5296 -581 7 1743 5327 7 0 0 chrX 151847796 151848390 -14801906 - L1Md_T LINE L1 -393 6189 5596 7 1743 3566 0 10 0 chrX 151848390 151848790 -14801506 + L1Md_T LINE L1 6179 6582 0 7 1743 7613 106 5 3 chrX 151848790 151850141 -14800155 + Lx LINE L1 5294 6645 -9 7 1743 567 0 0 0 chrX 151850145 151850208 -14800088 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 7 1743 399 176 12 12 chrX 151850225 151850311 -14799985 + L1_Mur3 LINE L1 1635 1720 -4160 7 1743 2456 243 82 10 chrX 151850668 151851271 -14799025 + Lx5 LINE L1 6428 7041 -9 7 1743 23 0 0 0 chrX 151851273 151851296 -14799000 + AT_rich Low_complexity Low_complexity 1 23 0 7 1743 316 148 114 0 chrX 151851302 151851390 -14798906 - Lx9 LINE L1 -6 7638 7541 7 1743 2419 293 43 21 chrX 151851561 151852354 -14797942 - Lx9 LINE L1 -463 7181 6372 7 1743 4118 147 40 17 chrX 151852487 151853212 -14797084 - RMER6A LTR ERVK -14 742 1 7 1743 23 33 0 0 chrX 151853502 151853532 -14796764 + AT_rich Low_complexity Low_complexity 1 30 0 7 1743 267 54 0 0 chrX 151853876 151853913 -14796383 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 7 1743 21 36 0 0 chrX 151853952 151853980 -14796316 + AT_rich Low_complexity Low_complexity 1 28 0 7 1743 27 49 0 0 chrX 151854761 151854802 -14795494 + AT_rich Low_complexity Low_complexity 1 41 0 7 1743 6550 90 0 1 chrX 151854891 151855893 -14794403 - L1_Mus2 LINE L1 -615 5951 4952 7 1743 4689 67 2 2 chrX 151855895 151856497 -14793799 + L1_Mus2 LINE L1 5963 6564 -2 7 1743 24 53 0 0 chrX 151856671 151856709 -14793587 + AT_rich Low_complexity Low_complexity 1 38 0 7 1743 427 273 79 37 chrX 151856839 151857029 -14793267 - Lx8 LINE L1 -10 7463 7266 7 1743 2484 205 42 16 chrX 151857022 151857597 -14792699 + Lx7 LINE L1 3582 4171 -1709 7 1743 2053 250 129 75 chrX 151857594 151859279 -14791017 - RMER1B Other Other -3 1063 1 7 1743 502 192 28 19 chrX 151859279 151859385 -14790911 + RMER6B LTR ERVK 355 461 0 7 1743 3070 203 85 17 chrX 151859385 151859503 -14790793 + Lx7 LINE L1 5123 5242 -638 7 1743 237 33 0 0 chrX 151859503 151859533 -14790763 + (CAA)n Simple_repeat Simple_repeat 3 32 0 7 1743 3070 223 90 17 chrX 151859533 151860589 -14789707 + Lx7 LINE L1 5243 6375 -1321 7 1743 2310 252 28 11 chrX 151860589 151861122 -14789174 + Lx7 LINE L1 6611 7152 -544 7 1743 4461 34 4 2 chrX 151861129 151861667 -14788629 + L1Md_F3 LINE L1 6044 6582 -2 7 1743 1105 148 470 8 chrX 151861687 151861938 -14788358 + ORR1B2 LTR MaLR 1 367 0 7 1743 388 224 62 90 chrX 151861947 151862158 -14788138 + Lx7 LINE L1 7159 7363 -333 7 1743 214 154 64 0 chrX 151862180 151862258 -14788038 + GA-rich Low_complexity Low_complexity 2 84 0 7 1743 523 264 110 14 chrX 151862379 151862525 -14787771 - Lx8 LINE L1 -193 7280 7121 7 1743 192 111 0 0 chrX 151862526 151862562 -14787734 + (T)n Simple_repeat Simple_repeat 1 36 0 7 1743 281 258 57 82 chrX 151862757 151862951 -14787345 + YREP_Mm Unknown Unknown 106 294 -1518 7 1743 538 237 58 17 chrX 151862842 151862962 -14787334 - ID_B1 SINE B4 -7 217 93 7 1743 227 247 36 24 chrX 151862976 151863059 -14787237 + Lx8 LINE L1 7384 7467 -6 7 1743 7448 48 4 16 chrX 151864430 151865241 -14785055 - L1Md_F2 LINE L1 0 6582 5781 7 1743 1300 93 11 0 chrX 151865241 151865423 -14784873 + B2_Mm1t SINE B2 4 187 -6 7 1743 7448 48 4 16 chrX 151865423 151865562 -14784734 - L1Md_F2 LINE L1 -802 5780 5643 7 1743 2151 116 6 9 chrX 151865610 151865932 -14784364 - ORR1A4 LTR MaLR -8 321 1 7 1743 22 35 0 0 chrX 151865934 151865963 -14784333 + AT_rich Low_complexity Low_complexity 1 29 0 7 1743 6978 31 0 2 chrX 151866063 151866881 -14783415 + L1Md_F2 LINE L1 5747 6562 -20 7 1743 362 331 183 21 chrX 151867187 151867378 -14782918 - LTR16C LTR ERVL -233 256 35 7 1743 202 271 34 0 chrX 151867708 151867767 -14782529 - L2c LINE L2 -1 3386 3326 7 1743 239 304 35 56 chrX 151868190 151868333 -14781963 + L1M2 LINE L1 5709 5848 -452 7 1743 211 115 0 88 chrX 151868572 151868629 -14781667 + A-rich Low_complexity Low_complexity 3 54 0 7 1743 368 253 41 31 chrX 151868630 151868728 -14781568 - MER5A1 DNA MER1_type -50 116 18 7 1743 356 210 30 0 chrX 151869593 151869693 -14780603 + L1MA8 LINE L1 6182 6284 -7 7 1743 228 122 0 0 chrX 151870218 151870259 -14780037 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1743 455 268 158 7 chrX 151870262 151870401 -14779895 - B3A SINE B2 -38 160 1 7 1743 369 0 0 0 chrX 151870437 151870478 -14779818 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1743 722 298 68 8 chrX 151871807 151872126 -14778170 + L1MA10 LINE L1 5914 6252 -82 7 1743 468 0 0 0 chrX 151872126 151872178 -14778118 + (TA)n Simple_repeat Simple_repeat 2 53 0 7 1743 722 298 68 8 chrX 151872178 151872210 -14778086 + L1MA10 LINE L1 6253 6286 -48 7 1743 545 268 19 7 chrX 151872227 151872381 -14777915 + Lx6 LINE L1 7296 7451 -9 7 1743 2162 132 6 3 chrX 151872679 151873005 -14777291 + ORR1A2 LTR MaLR 1 327 0 7 1743 214 182 0 0 chrX 151873029 151873073 -14777223 + T-rich Low_complexity Low_complexity 1 44 0 7 1743 310 248 158 14 chrX 151873927 151874066 -14776230 - L1ME1 LINE L1 -79 6100 5942 7 1743 312 257 0 0 chrX 151874071 151874145 -14776151 + L1M5 LINE L1 5555 5628 -551 7 1743 234 303 77 7 chrX 151874143 151874286 -14776010 - L1MD LINE L1 -819 5540 5388 7 1743 718 322 87 43 chrX 151874295 151875010 -14775286 - L1M5 LINE L1 -902 5244 4499 7 1743 4148 143 29 24 chrX 151875324 151876076 -14774220 + RMER6A LTR ERVK 1 756 0 7 1743 422 135 0 33 chrX 151876346 151876438 -14773858 + Lx2B LINE L1 6910 6998 -2 7 1743 604 204 58 69 chrX 151876737 151876911 -14773385 - RMER20B LTR ERVK -222 405 234 7 1743 699 285 30 12 chrX 151877077 151877275 -14773021 - ID_B1 SINE B4 -6 286 80 7 1743 287 273 193 0 chrX 151877283 151877371 -14772925 - PB1D10 SINE Alu -8 109 5 7 1743 234 313 145 0 chrX 151877510 151877641 -14772655 - L1MD LINE L1 -1766 4380 4231 7 1743 551 349 10 46 chrX 151877661 151877856 -14772440 + MER76 LTR ERVL 12 199 -492 7 1743 243 0 0 0 chrX 151877893 151877920 -14772376 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 1743 231 165 183 21 chrX 151878191 151878284 -14772012 - L1M5 LINE L1 -2476 3670 3563 7 1743 368 264 0 0 chrX 151878351 151878423 -14771873 - ID4_ SINE ID -9 74 3 7 1743 820 274 64 14 chrX 151878488 151878706 -14771590 + MTD LTR MaLR 25 253 -166 7 1743 2310 82 6 9 chrX 151878876 151879207 -14771089 - L1_Mus1 LINE L1 0 6567 6238 7 1743 242 56 28 0 chrX 151879233 151879269 -14771027 + (TA)n Simple_repeat Simple_repeat 1 37 0 7 1743 652 283 18 12 chrX 151879269 151879437 -14770859 - B3A SINE B2 -21 177 9 7 1743 31459 94 2 8 chrX 151879562 151884778 -14765518 + L1Md_F2 LINE L1 405 5585 -298 7 1743 7434 74 0 5 chrX 151884779 151885766 -14764530 + L1Md_F2 LINE L1 5587 6568 -14 7 1743 1300 301 80 68 chrX 151885780 151886754 -14763542 - L1_Rod LINE L1 -165 5682 4697 7 1743 1518 153 23 0 chrX 151886758 151887020 -14763276 - Lx2 LINE L1 -2 6995 6728 7 1743 28 0 0 0 chrX 151887020 151887048 -14763248 + AT_rich Low_complexity Low_complexity 1 28 0 7 1743 8926 9 2 0 chrX 151887054 151888728 -14761568 - L1Md_T LINE L1 0 6582 4906 7 1743 244 217 130 0 chrX 151888805 151888874 -14761422 - ID4_ SINE ID -1 82 5 7 1743 225 274 41 7 chrX 151888898 151889045 -14761251 - L1_Mur3 LINE L1 -2556 3324 3173 7 1743 1786 260 59 39 chrX 151890104 151891081 -14759215 + L1M3 LINE L1 3666 4662 -1478 7 1743 301 331 7 0 chrX 151891082 151891218 -14759078 - L1M3 LINE L1 -2258 3882 3746 7 1743 349 271 35 24 chrX 151891250 151891420 -14758876 + L1M2 LINE L1 3948 4119 -2024 7 1743 861 243 87 53 chrX 151892191 151892513 -14757783 - Lx9 LINE L1 -432 7212 6880 7 1743 457 251 12 24 chrX 151892570 151892737 -14757559 + (TA)n Simple_repeat Simple_repeat 1 165 0 7 1743 257 243 80 53 chrX 151892845 151892958 -14757338 - RLTR9E LTR ERVK -288 121 6 7 1743 4121 127 39 1 chrX 151892971 151893633 -14756663 + Lx4A LINE L1 5851 6537 -521 7 1743 426 39 0 0 chrX 151893657 151893709 -14756587 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 1743 33837 36 1 0 chrX 151893769 151899616 -14750680 + L1Md_T LINE L1 1 5589 -297 7 1743 8955 9 0 0 chrX 151899616 151900639 -14749657 + L1Md_T LINE L1 5590 6585 0 7 1743 184 0 0 88 chrX 151900756 151900790 -14749506 + (CAAAAA)n Simple_repeat Simple_repeat 3 33 0 7 1743 572 217 70 0 chrX 151900849 151900978 -14749318 + B1_Mur4 SINE Alu 1 138 -12 7 1743 207 88 0 0 chrX 151900978 151901012 -14749284 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 7 1743 494 43 0 14 chrX 151901155 151901225 -14749071 + (CA)n Simple_repeat Simple_repeat 2 70 0 7 1743 275 274 213 27 chrX 151901400 151901550 -14748746 + MER5B DNA MER1_type 1 178 0 7 1743 421 355 7 0 chrX 151901988 151902143 -14748153 + L2 LINE L2 2368 2523 -896 7 1743 478 205 50 25 chrX 151902145 151902265 -14748031 - RMER15 LTR ERVL -5 570 448 7 1743 216 182 0 0 chrX 151902268 151902312 -14747984 + T-rich Low_complexity Low_complexity 1 44 0 7 1743 307 0 0 44 chrX 151903303 151903348 -14746948 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 7 1743 1043 95 0 0 chrX 151903348 151903485 -14746811 - B1_Mus1 SINE Alu -10 138 2 7 1743 1258 242 19 160 chrX 151903642 151903728 -14746568 + Lx8 LINE L1 6358 6438 -1035 7 1743 723 201 55 44 chrX 151903728 151903910 -14746386 + B2_Mm2 SINE B2 3 186 -9 7 1743 1258 242 19 160 chrX 151903910 151904404 -14745892 + Lx8 LINE L1 6439 6856 -617 7 1743 25 31 0 0 chrX 151904404 151904436 -14745860 + AT_rich Low_complexity Low_complexity 1 32 0 7 1743 416 239 7 21 chrX 151904447 151904588 -14745708 - Lx9 LINE L1 -27 7617 7479 7 1743 2573 213 11 9 chrX 151904587 151905155 -14745141 - Lx9 LINE L1 -319 7325 6757 7 1743 403 308 128 27 chrX 151905156 151905435 -14744861 + RLTR11A2 LTR ERVK 1 283 -162 7 1743 300 53 0 0 chrX 151905435 151905473 -14744823 + (GGA)n Simple_repeat Simple_repeat 3 40 0 8 1743 289 291 82 112 chrX 151905473 151905740 -14744556 + RLTR11A2 LTR ERVK 216 474 -53 8 1743 1838 248 7 12 chrX 151905795 151906227 -14744069 - Lx9 LINE L1 -884 6760 6331 7 1743 360 0 0 0 chrX 151906227 151906267 -14744029 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 1743 1290 167 256 17 chrX 151906297 151906700 -14743596 + Lx6 LINE L1 2549 3047 -2833 8 1743 942 162 6 12 chrX 151906700 151906862 -14743434 - RMER16 LTR ERVK 0 533 373 8 1743 396 0 0 0 chrX 151906864 151906908 -14743388 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 8 1743 277 223 90 80 chrX 151907009 151907175 -14743121 - RMER16 LTR ERVK -193 340 214 8 1743 4383 175 69 82 chrX 151907176 151908505 -14741791 + Lx6 LINE L1 3044 4355 -1525 8 1743 2033 154 11 55 chrX 151908502 151908941 -14741355 + Lx6 LINE L1 5175 5594 -286 8 1743 1113 29 0 0 chrX 151908944 151909082 -14741214 + L1Md_T LINE L1 6444 6581 -1 8 1743 7102 218 60 50 chrX 151909229 151911082 -14739214 + Lx6 LINE L1 5587 7459 -1 8 1743 29 70 0 0 chrX 151911185 151911242 -14739054 + AT_rich Low_complexity Low_complexity 1 57 0 8 1743 298 254 39 71 chrX 151911450 151911577 -14738719 - RLTR40 LTR ERVK -250 567 445 8 217 2744 193 34 16 chrX 151912209 151912772 -14737524 + Lx5 LINE L1 6477 7049 -1 8 1744 1242 153 5 18 chrX 151912835 151913055 -14737241 - Lx2 LINE L1 -6 6991 6775 8 1744 3071 107 4 8 chrX 151913055 151913525 -14736771 - Lx2 LINE L1 -354 6643 6176 8 1744 264 301 47 28 chrX 151913526 151913632 -14736664 - RLTR40 LTR ERVK -423 394 287 8 1744 192 231 0 0 chrX 151913632 151913684 -14736612 + (CA)n Simple_repeat Simple_repeat 1 52 0 8 1744 950 230 32 43 chrX 151913695 151913977 -14736319 - RLTR40 LTR ERVK -520 297 19 8 1744 493 365 106 40 chrX 151915530 151915832 -14734464 - LTR16C LTR ERVL -134 355 34 8 1744 274 211 19 87 chrX 151916242 151916327 -14733969 + MLT1A1 LTR MaLR 1 76 -332 8 1744 219 36 0 0 chrX 151916327 151916355 -14733941 + (TGG)n Simple_repeat Simple_repeat 2 29 0 8 1744 274 211 19 87 chrX 151916355 151916373 -14733923 + MLT1A1 LTR MaLR 77 96 -312 8 1744 396 97 0 0 chrX 151916718 151916780 -14733516 + (TG)n Simple_repeat Simple_repeat 2 63 0 8 1744 25 51 0 0 chrX 151918648 151918687 -14731609 + AT_rich Low_complexity Low_complexity 1 39 0 8 1744 461 33 0 0 chrX 151919170 151919230 -14731066 + L1_Mus2 LINE L1 6506 6565 -1 8 1744 253 184 0 0 chrX 151919437 151919486 -14730810 + Lx9 LINE L1 7298 7346 -298 8 1744 388 308 102 111 chrX 151919651 151920101 -14730195 + MLT1C LTR MaLR 6 451 -16 8 1744 279 0 0 0 chrX 151920107 151920138 -14730158 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 1744 405 0 0 0 chrX 151920475 151920520 -14729776 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 8 1744 218 254 96 88 chrX 151920748 151920873 -14729423 + MamSINE1 SINE tRNA 4 129 -161 8 1744 229 211 0 0 chrX 151921179 151921217 -14729079 - RMER15 LTR ERVL -201 374 337 8 1744 327 127 0 0 chrX 151921404 151921467 -14728829 + (T)n Simple_repeat Simple_repeat 1 63 0 8 1744 27 29 0 0 chrX 151921522 151921556 -14728740 + AT_rich Low_complexity Low_complexity 1 34 0 8 1744 21 57 0 0 chrX 151921905 151921940 -14728356 + AT_rich Low_complexity Low_complexity 1 35 0 8 1744 1059 261 66 34 chrX 151922104 151922544 -14727752 - L1MA4A LINE L1 -373 5930 5477 8 1744 180 354 13 0 chrX 151923032 151923111 -14727185 - MIR SINE MIR -115 147 68 8 1744 207 365 0 0 chrX 151923241 151923315 -14726981 + MIR SINE MIR 9 82 -180 8 1744 639 0 0 0 chrX 151923347 151923418 -14726878 + (TTTC)n Simple_repeat Simple_repeat 3 73 0 8 1744 1599 93 0 0 chrX 151924036 151924262 -14726034 - L1_Mm LINE L1 -728 5155 4930 8 1744 3886 71 0 0 chrX 151924253 151924785 -14725511 + L1_Mm LINE L1 4404 4935 -948 8 1744 228 217 68 57 chrX 151924882 151924970 -14725326 + RMER21A LTR ERV1 107 195 -647 8 1744 236 252 26 147 chrX 151924965 151925081 -14725215 + RMER21A LTR ERV1 408 509 -438 8 1744 423 0 0 0 chrX 151925082 151925129 -14725167 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1744 633 121 0 0 chrX 151925129 151925253 -14725043 + (GA)n Simple_repeat Simple_repeat 1 124 0 8 1744 383 244 171 16 chrX 151925256 151925385 -14724911 + RMER21B LTR ERV1 419 567 -275 8 1744 1101 258 61 7 chrX 151925614 151925891 -14724405 + RMER21B LTR ERV1 276 567 -275 8 1744 366 389 14 75 chrX 151926008 151926222 -14724074 + LTR16C LTR ERVL 289 489 0 8 1744 886 301 22 25 chrX 151926379 151926703 -14723593 - Lx8 LINE L1 -344 7129 6807 8 1744 626 296 6 22 chrX 151926712 151926892 -14723404 + Lx8 LINE L1 7150 7326 -147 8 1744 3509 78 27 0 chrX 151926901 151927377 -14722919 + L1Md_F2 LINE L1 6093 6581 -1 8 1744 467 167 49 16 chrX 151927961 151928083 -14722213 - Lx9 LINE L1 0 7644 7519 8 1744 432 55 0 0 chrX 151928085 151928140 -14722156 + (CA)n Simple_repeat Simple_repeat 2 56 0 8 1744 450 0 0 0 chrX 151928140 151928189 -14722107 + (TA)n Simple_repeat Simple_repeat 2 51 0 8 1744 499 174 86 9 chrX 151928198 151928314 -14721982 - Lx9 LINE L1 -183 7461 7337 8 1744 776 244 48 10 chrX 151928332 151928539 -14721757 - B3 SINE B2 0 216 2 8 1744 346 340 19 0 chrX 151928543 151928646 -14721650 - PB1D7 SINE Alu -1 119 15 8 1744 444 282 30 1 chrX 151928783 151928915 -14721381 + B1F SINE Alu 9 144 -5 8 1744 479 198 69 10 chrX 151929920 151930022 -14720274 - B1_Mur1 SINE Alu -5 144 37 8 1744 863 292 63 30 chrX 151930128 151930396 -14719900 - B4A SINE B4 -6 286 10 8 1744 234 211 39 0 chrX 151930744 151930796 -14719500 - Lx8 LINE L1 -347 7126 7073 8 1744 1486 38 0 0 chrX 151930814 151931000 -14719296 + L1_Mus1 LINE L1 5597 5782 -785 8 1744 7352 87 1 1 chrX 151930999 151932567 -14717729 - L1_Mus1 LINE L1 0 6567 5001 8 1744 2604 85 53 118 chrX 151932572 151933080 -14717216 + IAPLTR2_Mm LTR ERVK 1 475 0 8 1744 1004 63 0 7 chrX 151933080 151933217 -14717079 + L1Md_T LINE L1 6446 6582 0 8 1744 5777 213 75 29 chrX 151933220 151933492 -14716804 - Lx6 LINE L1 -269 7191 6882 8 1744 345 47 0 0 chrX 151933492 151933535 -14716761 + (TCCC)n Simple_repeat Simple_repeat 2 44 0 8 1744 5777 213 75 29 chrX 151933535 151934714 -14715582 - Lx6 LINE L1 -579 6881 5673 8 1744 216 95 23 45 chrX 151934725 151934769 -14715527 + T-rich Low_complexity Low_complexity 5 47 0 8 1744 492 32 0 0 chrX 151935019 151935081 -14715215 + (CA)n Simple_repeat Simple_repeat 2 63 0 8 1744 3950 69 0 0 chrX 151935238 151935745 -14714551 - L1Md_F2 LINE L1 0 6582 6076 8 1744 1513 65 0 0 chrX 151935745 151935946 -14714350 + L1Md_F2 LINE L1 5880 6080 -502 8 1744 4647 84 32 8 chrX 151935965 151936613 -14713683 - L1_Mus3 LINE L1 -4 6634 5971 8 1744 665 209 30 7 chrX 151937355 151937490 -14712806 - B1F SINE Alu -2 147 10 8 1744 292 231 0 71 chrX 151937439 151937509 -14712787 - B4A SINE B4 -147 145 81 8 1744 974 298 53 86 chrX 151937512 151938059 -14712237 - L1M2 LINE L1 -3111 3032 2472 8 1744 251 318 0 0 chrX 151938059 151938122 -14712174 - ID4 SINE ID -16 67 5 8 1744 974 298 53 86 chrX 151938122 151938160 -14712136 - L1M2 LINE L1 -3672 2471 2471 8 1744 599 60 12 0 chrX 151938160 151938244 -14712052 + (TA)n Simple_repeat Simple_repeat 1 85 0 8 1744 974 298 53 86 chrX 151938244 151938543 -14711753 - L1M2 LINE L1 -3672 2471 2176 8 1744 3401 43 10 0 chrX 151939511 151939929 -14710367 - L1Md_F3 LINE L1 0 6584 6163 8 1744 4063 28 0 0 chrX 151939929 151940429 -14709867 + L1Md_F3 LINE L1 5647 6146 -438 8 1744 311 212 0 70 chrX 151940448 151940519 -14709777 - ID4_ SINE ID 0 83 18 8 1744 244 156 0 0 chrX 151940546 151940591 -14709705 - L1M2 LINE L1 -3984 2159 2115 8 1744 218 32 32 0 chrX 151940591 151940622 -14709674 + (TC)n Simple_repeat Simple_repeat 2 33 0 8 1744 3133 236 31 25 chrX 151940863 151941719 -14708577 - Lx9 LINE L1 -7 7637 6776 8 1744 7717 39 5 10 chrX 151941728 151941758 -14708538 - L1Md_F2 LINE L1 0 6582 6558 8 1744 2935 49 52 0 chrX 151941758 151942127 -14708169 - RLTR10 LTR ERVK -2 388 1 8 1744 10204 36 4 4 chrX 151942127 151944032 -14706264 - L1Md_F2 LINE L1 -25 6557 4649 8 1744 3467 250 71 34 chrX 151944033 151945573 -14704723 - Lx9 LINE L1 -864 6780 5168 8 1744 313 285 62 14 chrX 151945591 151945737 -14704559 + Lx9 LINE L1 5900 6052 -1592 8 1744 660 279 30 0 chrX 151945947 151946112 -14704184 + Lx9 LINE L1 6341 6510 -1134 8 1744 382 381 7 0 chrX 151946148 151946303 -14703993 + MLT1H LTR MaLR 91 246 -303 8 1744 235 130 0 36 chrX 151946496 151946552 -14703744 + GA-rich Low_complexity Low_complexity 2 55 0 8 1744 333 68 0 0 chrX 151946909 151946953 -14703343 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 1744 333 241 24 37 chrX 151946998 151947080 -14703216 - B1F SINE Alu 0 149 69 8 1744 341 279 114 61 chrX 151947104 151947466 -14702830 - L1M3 LINE L1 -512 5668 5288 8 1744 409 262 159 56 chrX 151947557 151947703 -14702593 - Lx7 LINE L1 0 7696 7533 8 1744 2213 93 31 28 chrX 151947703 151947887 -14702409 + Lx LINE L1 6299 6483 -171 8 1744 2964 81 5 2 chrX 151947887 151948282 -14702014 - MTA_Mm LTR MaLR 0 396 1 8 1744 2213 93 31 28 chrX 151948282 151948450 -14701846 + Lx LINE L1 6484 6652 -2 8 1744 409 262 159 56 chrX 151948450 151948623 -14701673 - Lx7 LINE L1 -164 7532 7344 8 1744 558 273 86 10 chrX 151948614 151948844 -14701452 + L1MB1 LINE L1 5872 6128 -61 8 1744 25 51 0 0 chrX 151948852 151948891 -14701405 + AT_rich Low_complexity Low_complexity 1 39 0 8 1744 483 343 0 20 chrX 151948893 151949039 -14701257 + ID_B1 SINE B4 82 224 0 8 1744 237 132 0 0 chrX 151949111 151949149 -14701147 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 8 1744 203 258 15 29 chrX 151949283 151949351 -14700945 + (TATG)n Simple_repeat Simple_repeat 4 70 0 8 1744 348 122 24 12 chrX 151949698 151949781 -14700515 + (TAGA)n Simple_repeat Simple_repeat 4 87 0 8 1744 498 323 64 19 chrX 151950519 151950784 -14699512 + B4A SINE B4 2 278 -14 8 1744 277 256 96 12 chrX 151950899 151950982 -14699314 - B3A SINE B2 -79 119 30 8 1744 412 179 19 147 chrX 151950984 151951141 -14699155 - RMER1B Other Other -4 1062 926 8 1744 621 257 106 29 chrX 151951247 151951455 -14698841 - MER2 DNA MER2_type -120 225 2 8 1744 977 223 41 102 chrX 151951838 151951937 -14698359 + Lx LINE L1 5502 5615 -685 8 1744 7395 79 5 4 chrX 151951937 151952930 -14697366 + L1Md_F2 LINE L1 5588 6581 -1 8 1744 5634 161 19 21 chrX 151952930 151954003 -14696293 + Lx LINE L1 5591 6640 -14 8 1744 509 386 0 44 chrX 151954014 151954220 -14696076 + MTE-int LTR MaLR 998 1194 -386 8 1744 2356 220 48 9 chrX 151954222 151954746 -14695550 + Lx5 LINE L1 6504 7047 -3 8 1744 377 300 117 36 chrX 151954769 151955291 -14695005 + L1M4c LINE L1 887 1450 -5092 8 1744 809 186 220 0 chrX 151955338 151955515 -14694781 + Lx7 LINE L1 6421 6636 -1060 8 1744 293 292 97 23 chrX 151955577 151955836 -14694460 + L1M4c LINE L1 1550 1827 -4819 8 1744 1391 73 0 0 chrX 151955833 151956010 -14694286 - L1_Mus1 LINE L1 -203 6364 6188 8 1744 1395 87 58 0 chrX 151956011 151956217 -14694079 + L1_Mus1 LINE L1 6350 6567 0 8 1744 216 163 0 0 chrX 151956264 151956307 -14693989 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 1744 454 273 40 23 chrX 151956310 151956486 -14693810 + L1M4c LINE L1 1844 2022 -4624 8 1744 1119 64 0 7 chrX 151956574 151956715 -14693581 - B1_Mus1 SINE Alu -8 140 1 8 1744 294 270 139 11 chrX 151956737 151956924 -14693372 + L1M4c LINE L1 2210 2420 -4226 8 1744 4364 200 105 34 chrX 151957119 151958349 -14691947 + Lx7 LINE L1 6380 7696 0 8 1744 292 200 0 0 chrX 151958501 151958556 -14691740 - MTC LTR MaLR -366 55 1 9 1744 682 331 79 81 chrX 151958681 151959012 -14691284 - Lx8 LINE L1 -145 7328 6972 9 1744 1611 199 122 13 chrX 151959012 151959388 -14690908 - MTC LTR MaLR 0 421 5 9 1744 682 331 79 81 chrX 151959388 151959450 -14690846 - Lx8 LINE L1 -502 6971 6936 9 1744 243 0 0 0 chrX 151959553 151959580 -14690716 + (CA)n Simple_repeat Simple_repeat 1 27 0 9 1744 748 272 70 88 chrX 151960009 151960452 -14689844 - RMER10A LTR ERVL -7 435 1 9 1744 907 261 127 32 chrX 151960496 151960970 -14689326 + L1M4c LINE L1 4909 5427 -1217 8 1744 338 370 8 28 chrX 151961002 151961136 -14689160 - PB1D7 SINE Alu -20 130 2 9 1744 655 277 130 13 chrX 151961137 151961621 -14688675 + L1M4c LINE L1 5420 5967 -714 8 1744 285 256 114 40 chrX 151961681 151961856 -14688440 - RMER2 LTR ERV1 0 567 380 9 1744 26467 133 22 31 chrX 151962114 151968406 -14681890 + L1_Mus3 LINE L1 395 6633 -5 9 1744 195 129 0 0 chrX 151968747 151968778 -14681518 + (TA)n Simple_repeat Simple_repeat 2 32 0 9 1744 680 231 116 0 chrX 151968999 151969198 -14681098 - MMAR1 DNA Mariner -1061 225 4 9 1744 565 115 0 50 chrX 151969451 151969570 -14680726 - Lx9 LINE L1 0 7644 7532 9 1744 251 0 9 146 chrX 151970630 151970740 -14679556 + (CTAAT)n Simple_repeat Simple_repeat 4 98 0 9 1744 1199 95 0 11 chrX 151970917 151971098 -14679198 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 9 1744 196 93 45 23 chrX 151971346 151971390 -14678906 + A-rich Low_complexity Low_complexity 2 46 0 9 1744 2496 281 49 35 chrX 151971675 151972455 -14677841 - Lx7 LINE L1 -715 6981 6191 9 1744 7606 103 1 8 chrX 151973807 151975025 -14675271 + L1_Mus4 LINE L1 5426 6636 0 9 1744 243 0 0 0 chrX 151975268 151975295 -14675001 + (TG)n Simple_repeat Simple_repeat 2 28 0 9 1744 487 320 40 80 chrX 151976093 151976419 -14673877 - RLTR25A LTR ERVK -789 314 2 9 1744 402 21 0 0 chrX 151976420 151976467 -14673829 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 1744 22 88 0 0 chrX 151976842 151976899 -14673397 + AT_rich Low_complexity Low_complexity 1 57 0 9 1744 596 219 0 0 chrX 151977832 151977937 -14672359 + 5S rRNA rRNA 1 105 -16 9 1744 3935 250 52 5 chrX 151978089 151979079 -14671217 + Lx5 LINE L1 5974 7009 -41 9 1744 276 77 0 0 chrX 151979120 151979159 -14671137 + (CATA)n Simple_repeat Simple_repeat 2 40 0 9 1744 26 0 0 0 chrX 151979220 151979246 -14671050 + AT_rich Low_complexity Low_complexity 1 26 0 9 1744 690 218 6 50 chrX 151979254 151979274 -14671022 - L1M4 LINE L1 -2228 3918 3903 9 1744 2655 34 9 0 chrX 151979274 151979596 -14670700 - L1Md_F2 LINE L1 -2 6580 6256 9 1744 1274 56 0 0 chrX 151979596 151979756 -14670540 - L1Md_A LINE L1 -2007 3876 3717 9 1744 11061 107 9 14 chrX 151979760 151982145 -14668151 - L1Md_A LINE L1 -3130 2753 383 9 1744 360 0 0 0 chrX 151982150 151982190 -14668106 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 9 1744 1127 79 0 0 chrX 151982192 151982332 -14667964 - B1_Mus1 SINE Alu -6 142 3 9 1744 27 29 0 0 chrX 151983029 151983063 -14667233 + AT_rich Low_complexity Low_complexity 1 34 0 9 1744 497 338 0 0 chrX 151983108 151983247 -14667049 - RSINE1 SINE B4 -24 141 3 9 1744 261 195 146 22 chrX 151983590 151983679 -14666617 - Lx9 LINE L1 -7 7637 7538 9 1744 566 281 95 12 chrX 151983789 151984030 -14666266 - Lx9 LINE L1 -127 7517 7257 9 1744 2803 46 0 3 chrX 151984415 151984762 -14665534 + L1Md_F2 LINE L1 5240 5585 -298 9 1744 7984 41 13 1 chrX 151984763 151985744 -14664552 + L1Md_F2 LINE L1 5587 6579 -3 9 1744 6405 99 18 4 chrX 151986593 151988279 -14662017 - L1VL2 LINE L1 -1788 1827 116 9 1744 238 312 78 0 chrX 151988674 151988738 -14661558 + MER63D DNA AcHobo 15 83 -978 9 1744 358 371 148 35 chrX 151989206 151989457 -14660839 + LTR16C LTR ERVL 8 288 -201 9 1744 4774 122 46 32 chrX 151989457 151990334 -14659962 - RMER17D LTR ERVK 0 889 1 9 1744 358 371 148 35 chrX 151990334 151990515 -14659781 + LTR16C LTR ERVL 289 489 0 9 1744 207 203 43 0 chrX 151992961 151993030 -14657266 + GA-rich Low_complexity Low_complexity 1 72 0 9 1744 180 77 0 0 chrX 151993783 151993809 -14656487 + (CAA)n Simple_repeat Simple_repeat 2 27 0 9 1744 475 246 15 0 chrX 151993982 151994116 -14656180 + L1MA7 LINE L1 6155 6290 -1 9 1744 351 0 0 0 chrX 151994173 151994212 -14656084 + (TC)n Simple_repeat Simple_repeat 1 39 0 9 1744 323 342 81 31 chrX 151994285 151994445 -14655851 - B4 SINE B4 0 292 125 9 1744 1171 256 37 34 chrX 151994507 151994830 -14655466 - Lx6 LINE L1 -11 7449 7126 9 1744 33 25 0 0 chrX 151995258 151995298 -14654998 + AT_rich Low_complexity Low_complexity 1 40 0 9 1744 9472 94 27 17 chrX 151995298 151996899 -14653397 - Lx3A LINE L1 -12 6969 5515 9 1744 680 35 0 11 chrX 151996899 151996987 -14653309 + (TA)n Simple_repeat Simple_repeat 2 88 0 9 1744 960 198 78 9 chrX 151996987 151997019 -14653277 - Lx3A LINE L1 -208 6768 6730 9 1744 261 83 0 0 chrX 151997194 151997230 -14653066 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 1744 455 222 61 61 chrX 151997257 151997372 -14652924 - PB1D10 SINE Alu 0 117 3 9 1744 522 0 0 0 chrX 151997400 151997458 -14652838 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 9 1744 715 271 92 22 chrX 151997477 151997749 -14652547 - Lx8 LINE L1 -7 7466 7176 9 1744 21 36 0 0 chrX 151998423 151998451 -14651845 + AT_rich Low_complexity Low_complexity 1 28 0 9 1744 562 270 40 0 chrX 151998863 151999037 -14651259 + Lx7 LINE L1 7511 7691 -5 9 1744 490 342 7 0 chrX 151999137 151999283 -14651013 - RSINE1 SINE B4 -15 150 4 9 1744 546 168 11 0 chrX 151999417 151999512 -14650784 + B1_Mur3 SINE Alu 45 140 -9 9 1744 1049 222 149 10 chrX 151999561 151999678 -14650618 - RMER17B LTR ERVK 0 958 842 9 1744 504 59 0 0 chrX 151999678 151999746 -14650550 + (TG)n Simple_repeat Simple_repeat 2 69 0 9 1744 1049 138 69 4 chrX 151999746 152000000 -14650296 - RMER17B LTR ERVK -117 841 609 9 1744 1120 94 23 0 chrX 152000009 152000180 -14650116 - RMER17B LTR ERVK -730 228 54 1 1744 423 0 0 0 chrX 152000586 152000633 -14649663 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1744 753 315 64 7 chrX 152000702 152000983 -14649313 - Lx8 LINE L1 -235 7238 6942 3 1744 230 0 33 0 chrX 152000991 152001021 -14649275 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1744 257 256 36 36 chrX 152001584 152001722 -14648574 + (TATATG)n Simple_repeat Simple_repeat 5 142 0 5 1744 1641 82 0 4 chrX 152002334 152002567 -14647729 - L1_Mus4 LINE L1 -6 6630 6399 6 1744 1837 94 0 0 chrX 152002567 152002822 -14647474 + L1_Mus4 LINE L1 6102 6356 -280 6 1744 293 289 28 19 chrX 152002913 152003019 -14647277 - Charlie24 DNA MER1_type -20 2430 2324 7 1744 215 132 38 0 chrX 152003604 152003657 -14646639 + T-rich Low_complexity Low_complexity 4 58 0 8 1744 277 303 29 39 chrX 152004167 152004270 -14646026 + L2a LINE L2 3301 3402 -24 9 1744 272 226 16 0 chrX 152004306 152004368 -14645928 - MIR SINE MIR -110 152 90 1 1744 191 274 81 35 chrX 152006371 152006458 -14643838 + MIR3 SINE MIR 84 174 -34 1 1744 405 0 0 0 chrX 152006981 152007026 -14643270 + (A)n Simple_repeat Simple_repeat 1 45 0 1 1744 201 171 0 0 chrX 152009751 152009786 -14640510 + A-rich Low_complexity Low_complexity 1 35 0 1 1744 706 143 0 67 chrX 152009848 152009998 -14640298 - L1Md_F2 LINE L1 -1 6581 6442 1 1744 227 54 27 0 chrX 152010052 152010089 -14640207 + (TTTTTG)n Simple_repeat Simple_repeat 4 41 0 1 1744 524 95 12 12 chrX 152010431 152010516 -14639780 - L1_Mur2 LINE L1 -981 4896 4812 1 1744 862 152 118 16 chrX 152010530 152010717 -14639579 + Lx5 LINE L1 6842 7047 -3 1 1744 27 73 0 0 chrX 152012198 152012253 -14638043 + AT_rich Low_complexity Low_complexity 1 55 0 1 1744 225 196 22 0 chrX 152012574 152012620 -14637676 + CT-rich Low_complexity Low_complexity 3 49 0 1 1744 413 353 60 0 chrX 152013384 152013517 -14636779 + RSINE1 SINE B4 2 142 -23 2 1744 384 22 0 0 chrX 152014038 152014083 -14636213 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 1744 23 54 0 0 chrX 152014644 152014681 -14635615 + AT_rich Low_complexity Low_complexity 1 37 0 2 1744 243 146 0 0 chrX 152015629 152015670 -14634626 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 1744 201 74 0 0 chrX 152015718 152015745 -14634551 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2 1744 2801 131 39 13 chrX 152015746 152016211 -14634085 - Lx2 LINE L1 -1 6996 6520 2 1744 39 0 0 0 chrX 152017707 152017746 -14632550 + AT_rich Low_complexity Low_complexity 1 39 0 2 1744 564 15 0 0 chrX 152017957 152018022 -14632274 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 2 1744 547 325 80 34 chrX 152020312 152020637 -14629659 + LTR16C LTR ERVL 150 489 0 2 1744 438 282 132 18 chrX 152021750 152021916 -14628380 + MER5A DNA MER1_type 1 185 -4 2 1744 2137 183 23 35 chrX 152021965 152022362 -14627934 + MTC LTR MaLR 1 392 -29 3 1744 299 269 26 0 chrX 152022450 152022528 -14627768 + ID4_ SINE ID 2 81 -2 3 1744 439 366 36 18 chrX 152022609 152022834 -14627462 - MIR SINE MIR -21 241 13 3 1744 210 37 0 0 chrX 152024666 152024693 -14625603 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 3 1744 1621 230 11 6 chrX 152025528 152025878 -14624418 - Lx6 LINE L1 -13 7447 7096 3 1744 365 255 17 117 chrX 152028717 152028738 -14621558 - B4 SINE B4 -2 290 271 3 1744 438 79 0 0 chrX 152028738 152028801 -14621495 + (TG)n Simple_repeat Simple_repeat 1 63 0 3 1744 365 255 17 117 chrX 152028801 152028899 -14621397 - B4 SINE B4 -22 270 183 3 1744 470 261 0 0 chrX 152028850 152028942 -14621354 - PB1D9 SINE Alu -7 113 22 3 1744 451 264 0 52 chrX 152028992 152029108 -14621188 + B1_Mur4 SINE Alu 39 148 -2 3 1744 261 0 0 0 chrX 152029114 152029143 -14621153 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 3 1744 252 0 0 0 chrX 152030013 152030041 -14620255 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 4 1744 371 218 235 70 chrX 152030295 152030482 -14619814 + MIR SINE MIR 34 251 -11 4 1744 2833 99 2 2 chrX 152030622 152031018 -14619278 - MTA_Mm LTR MaLR 0 396 1 4 1744 660 299 55 5 chrX 152031091 152031293 -14619003 + B3 SINE B2 1 212 -4 4 1744 472 313 60 0 chrX 152031485 152031635 -14618661 - MIRb SINE MIR -59 209 51 4 1744 2323 204 90 4 chrX 152032008 152032495 -14617801 + RLTR24 LTR ERV1 1 529 0 4 1744 252 254 77 26 chrX 152032652 152032769 -14617527 + L2a LINE L2 3300 3422 -4 4 1744 24 0 0 0 chrX 152034575 152034599 -14615697 + AT_rich Low_complexity Low_complexity 1 24 0 4 1744 875 310 119 20 chrX 152034796 152035240 -14615056 + LTR16C LTR ERVL 2 489 0 4 1744 324 0 0 0 chrX 152035732 152035768 -14614528 + (CAA)n Simple_repeat Simple_repeat 1 36 0 4 1744 499 331 35 16 chrX 152036232 152036490 -14613806 - L1ME3 LINE L1 0 6162 5900 5 1744 618 287 6 54 chrX 152036921 152037234 -14613062 - L1ME3 LINE L1 -869 5575 5278 5 1744 219 329 107 19 chrX 152037289 152037449 -14612847 + MIRm SINE MIR 4 181 -87 5 1744 246 277 108 0 chrX 152037924 152037989 -14612307 + L2c LINE L2 3117 3188 -199 5 1744 225 146 0 40 chrX 152038290 152038340 -14611956 + A-rich Low_complexity Low_complexity 3 50 0 5 1744 783 293 76 33 chrX 152039101 152039376 -14610920 - B4A SINE B4 -1 291 5 5 1744 411 291 36 22 chrX 152039403 152039540 -14610756 + ID_B1 SINE B4 84 222 -2 5 1744 386 262 62 18 chrX 152039861 152040045 -14610251 - L1MC4a LINE L1 -62 7820 7675 5 1744 316 329 77 45 chrX 152040166 152040322 -14609974 - MER5A1 DNA MER1_type 0 166 6 5 1744 180 0 0 0 chrX 152040843 152040863 -14609433 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1744 390 277 0 38 chrX 152041232 152041337 -14608959 + PB1D10 SINE Alu 2 102 -15 5 1744 187 122 20 20 chrX 152042280 152042330 -14607966 + A-rich Low_complexity Low_complexity 2 51 0 6 27 1136 258 69 58 chrX 152042975 152043771 -14606525 - L1MCa LINE L1 -3555 3009 2202 6 1745 1149 273 113 58 chrX 152043830 152045194 -14605102 - L1MCa LINE L1 -4664 2087 569 6 1745 230 0 33 0 chrX 152045495 152045525 -14604771 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 1745 1104 58 0 0 chrX 152045525 152045664 -14604632 - B1_Mm SINE Alu -8 139 1 6 1745 767 311 59 33 chrX 152045737 152046043 -14604253 + MER31A LTR ERV1 142 455 -30 6 1745 385 246 24 8 chrX 152046224 152046351 -14603945 - L1MA4A LINE L1 -374 5926 5798 6 1745 384 338 35 14 chrX 152046851 152046995 -14603301 + MER5A DNA MER1_type 8 154 -35 6 1745 275 236 0 11 chrX 152047037 152047131 -14603165 + CT-rich Low_complexity Low_complexity 2 94 0 6 1745 504 0 0 0 chrX 152047133 152047189 -14603107 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1745 263 294 44 0 chrX 152048374 152048442 -14601854 + MER5A1 DNA MER1_type 1 71 -95 6 1745 334 304 54 11 chrX 152048445 152048586 -14601710 + B1F SINE Alu 1 148 0 7 1745 227 269 0 19 chrX 152048591 152048644 -14601652 + MER5A1 DNA MER1_type 66 117 -49 6 1745 279 254 14 149 chrX 152050374 152050522 -14599774 + LTR16C LTR ERVL 261 388 -101 7 1745 812 199 7 14 chrX 152050620 152050768 -14599528 - B1_Mur3 SINE Alu 0 149 3 7 1745 307 288 0 0 chrX 152051453 152051526 -14598770 - ID_B1 SINE B4 -63 161 89 7 1745 252 247 105 12 chrX 152051865 152051951 -14598345 + L3 LINE CR1 4395 4488 -1 7 1745 441 302 0 23 chrX 152052469 152052598 -14597698 - MER20 DNA MER1_type -1 218 93 7 1745 666 109 0 0 chrX 152052622 152052723 -14597573 + (GAA)n Simple_repeat Simple_repeat 2 102 0 7 1745 324 0 0 0 chrX 152052721 152052757 -14597539 + (CAA)n Simple_repeat Simple_repeat 2 37 0 7 1745 24 0 0 0 chrX 152053000 152053024 -14597272 + AT_rich Low_complexity Low_complexity 1 24 0 7 1745 210 216 0 0 chrX 152053792 152053866 -14596430 + (TA)n Simple_repeat Simple_repeat 2 75 0 7 1745 246 136 0 0 chrX 152056693 152056737 -14593559 + (A)n Simple_repeat Simple_repeat 1 44 0 8 1745 474 149 0 0 chrX 152057908 152057995 -14592301 + (CGG)n Simple_repeat Simple_repeat 2 88 0 8 1745 186 43 0 0 chrX 152059030 152059053 -14591243 + (TCC)n Simple_repeat Simple_repeat 2 24 0 8 1745 651 26 0 0 chrX 152059785 152059862 -14590434 + (GGA)n Simple_repeat Simple_repeat 1 77 0 8 1745 203 194 0 0 chrX 152060077 152060113 -14590183 + T-rich Low_complexity Low_complexity 1 36 0 8 1745 180 0 0 0 chrX 152060932 152060952 -14589344 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 8 1745 414 0 0 0 chrX 152061302 152061348 -14588948 + (TG)n Simple_repeat Simple_repeat 2 47 0 8 1745 402 333 98 19 chrX 152061623 152061837 -14588459 + MIR SINE MIR 31 261 -1 8 1745 1289 299 13 10 chrX 152061873 152062258 -14588038 + MER90a LTR ERV1 4 389 -225 8 1745 207 189 0 0 chrX 152062723 152062760 -14587536 + CT-rich Low_complexity Low_complexity 1 37 0 8 1745 229 396 57 0 chrX 152062760 152062788 -14587508 - MTEa LTR MaLR -267 112 1 9 1745 432 231 0 0 chrX 152062788 152062866 -14587430 - MT2A LTR ERVL -455 78 1 9 1745 1882 205 26 31 chrX 152062866 152063249 -14587047 - MTD LTR MaLR -38 381 1 9 1745 550 314 61 9 chrX 152063342 152063554 -14586742 + Tigger7 DNA MER2_type 2265 2487 -4 9 1745 39 50 0 0 chrX 152063577 152063637 -14586659 + AT_rich Low_complexity Low_complexity 1 60 0 9 1745 261 0 0 0 chrX 152063699 152063728 -14586568 + (TC)n Simple_repeat Simple_repeat 1 29 0 9 1745 779 229 76 10 chrX 152063750 152064041 -14586255 - Lx7 LINE L1 -170 7526 7217 9 1745 583 244 122 24 chrX 152064040 152064204 -14586092 - Lx7 LINE L1 -728 6968 6789 9 1745 7218 44 1 9 chrX 152064215 152065173 -14585123 - L1Md_T LINE L1 -1 6581 5666 9 1745 2361 88 72 35 chrX 152065383 152065758 -14584538 + Lx2 LINE L1 6608 6996 -1 9 1745 24 0 0 0 chrX 152066124 152066148 -14584148 + AT_rich Low_complexity Low_complexity 1 24 0 9 1745 262 254 113 50 chrX 152067087 152067228 -14583068 - Lx5 LINE L1 0 7050 6901 1 1745 3289 106 14 2 chrX 152067604 152068086 -14582210 - L1_Mus3 LINE L1 0 6638 6151 1 1745 294 337 47 35 chrX 152068204 152068376 -14581920 - MIR SINE MIR -30 232 59 1 1745 339 330 114 75 chrX 152069865 152070120 -14580176 + LTR16C LTR ERVL 150 414 -75 1 1745 342 45 0 0 chrX 152070880 152070924 -14579372 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1745 288 165 175 12 chrX 152071124 152071204 -14579092 - L1M4 LINE L1 -554 5624 5532 1 1745 419 286 91 18 chrX 152071226 152071360 -14578936 - B1F SINE Alu -26 123 1 1 1745 357 295 10 35 chrX 152071372 152071497 -14578799 - B1F SINE Alu 0 120 1 1 1745 844 160 0 8 chrX 152072023 152072155 -14578141 + B3 SINE B2 2 132 -84 1 1745 1672 200 89 3 chrX 152072157 152072493 -14577803 - ORR1C2 LTR MaLR -4 380 16 1 1745 1994 136 55 28 chrX 152072494 152072856 -14577440 - Lx LINE L1 -1 6653 6282 1 1745 929 306 113 47 chrX 152074282 152074707 -14575589 - MLT1C LTR MaLR -12 455 3 1 1745 25 51 0 0 chrX 152074861 152074900 -14575396 + AT_rich Low_complexity Low_complexity 1 39 0 1 1745 2055 137 0 0 chrX 152074953 152075268 -14575028 + Lx LINE L1 6334 6648 -6 1 1745 215 267 51 51 chrX 152075387 152075466 -14574830 - PB1D7 SINE Alu -19 101 23 1 1745 468 0 0 0 chrX 152075482 152075534 -14574762 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1745 350 177 8 34 chrX 152075666 152075783 -14574513 + CT-rich Low_complexity Low_complexity 1 114 0 1 1745 1813 178 11 42 chrX 152075883 152076236 -14574060 - RLTR15 LTR ERVK -12 347 6 1 1745 804 279 39 0 chrX 152076518 152076722 -14573574 - B3 SINE B2 -4 212 1 1 1745 392 346 37 37 chrX 152076910 152077072 -14573224 - RSINE1 SINE B4 0 165 4 1 1745 1030 243 19 0 chrX 152077109 152077315 -14572981 - B3 SINE B2 -5 211 2 1 1745 180 0 0 0 chrX 152077760 152077780 -14572516 + (GA)n Simple_repeat Simple_repeat 1 20 0 1 1745 219 36 0 0 chrX 152078062 152078090 -14572206 + (CAA)n Simple_repeat Simple_repeat 3 30 0 1 1745 740 248 130 28 chrX 152078274 152078527 -14571769 - B4A SINE B4 -12 280 2 1 1745 31 26 0 0 chrX 152079179 152079217 -14571079 + AT_rich Low_complexity Low_complexity 1 38 0 1 1745 1319 227 93 36 chrX 152079840 152080296 -14570000 - Charlie4a DNA MER1_type -5 503 20 1 1745 775 282 9 73 chrX 152080584 152080802 -14569494 - B4A SINE B4 -88 204 1 1 1745 237 373 37 7 chrX 152081343 152081478 -14568818 - L2b LINE L2 -217 3158 3020 1 1745 305 333 43 0 chrX 152081767 152081884 -14568412 - MLT1A LTR MaLR 0 374 253 1 1745 444 287 69 37 chrX 152081906 152082094 -14568202 - MLT1A LTR MaLR -176 198 5 1 1745 229 368 19 9 chrX 152082110 152082217 -14568079 - L2b LINE L2 -745 2674 2567 1 1745 545 0 0 15 chrX 152082767 152082833 -14567463 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 1745 384 22 0 0 chrX 152082897 152082942 -14567354 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1745 537 64 0 0 chrX 152082942 152083019 -14567277 + (GA)n Simple_repeat Simple_repeat 1 78 0 1 1745 290 160 19 39 chrX 152083328 152083380 -14566916 + ID4_ SINE ID 20 70 -13 1 1745 272 274 0 75 chrX 152083380 152083395 -14566901 + tRNA-Ala-GCY_ tRNA tRNA 14 75 0 1 1745 250 393 22 0 chrX 152084512 152084601 -14565695 - B4A SINE B4 -91 201 111 1 1745 6088 224 100 27 chrX 152084744 152085968 -14564328 - Lx9 LINE L1 -7 7637 6346 1 1745 384 22 0 0 chrX 152085968 152086013 -14564283 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1745 6088 224 100 27 chrX 152086013 152086688 -14563608 - Lx9 LINE L1 -1299 6345 5600 1 1745 4081 170 75 78 chrX 152086688 152087560 -14562736 + RMER19B LTR ERVK 1 869 -33 1 1745 1820 136 36 0 chrX 152087563 152087871 -14562425 - Lx2A LINE L1 -193 6815 6497 1 1745 605 160 20 20 chrX 152087868 152088015 -14562281 + Lx2A LINE L1 6822 6968 -40 1 1745 360 183 0 87 chrX 152087982 152088108 -14562188 + Lx2A1 LINE L1 6894 7008 0 1 1745 323 40 0 0 chrX 152088148 152088198 -14562098 + L1Md_T LINE L1 6533 6582 0 1 1745 254 204 0 0 chrX 152088300 152088354 -14561942 - L1_Mur2 LINE L1 -1444 4433 4380 1 1745 2863 131 14 184 chrX 152088380 152088459 -14561837 - L1_Mur2 LINE L1 -1483 4394 4332 1 1745 385 34 0 33 chrX 152088459 152088520 -14561776 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 1 1745 986 124 0 0 chrX 152088520 152088657 -14561639 - B1_Mm SINE Alu -10 137 1 1 1745 2863 131 14 184 chrX 152088657 152089428 -14560868 - L1_Mur2 LINE L1 -1546 4331 3689 1 1745 2088 213 61 21 chrX 152089419 152090023 -14560273 - L1_Rod LINE L1 -2994 2853 2226 1 1745 349 212 98 8 chrX 152090020 152090153 -14560143 - L1_Rod LINE L1 -4090 1757 1613 1 1745 1596 241 39 2 chrX 152090154 152090586 -14559710 - L1_Rod LINE L1 -6600 1008 561 1 1745 359 306 36 36 chrX 152092043 152092209 -14558087 + L2c LINE L2 3216 3381 -6 1 1745 216 0 0 0 chrX 152092991 152093015 -14557281 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1745 203 156 0 0 chrX 152093212 152093244 -14557052 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1745 1580 16 0 31 chrX 152094360 152094551 -14555745 - B2_Mm1t SINE B2 -8 185 1 1 1745 231 261 41 16 chrX 152094556 152094677 -14555619 - Lx9 LINE L1 -2 7642 7519 1 1745 450 0 0 0 chrX 152094682 152094732 -14555564 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1745 180 0 0 0 chrX 152095248 152095268 -14555028 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1745 320 255 51 0 chrX 152095576 152095674 -14554622 + HAL1-3A_ME LINE L1 1955 2057 -801 1 1745 250 235 12 36 chrX 152095804 152095888 -14554408 + (TATG)n Simple_repeat Simple_repeat 3 84 0 1 1745 355 409 6 25 chrX 152097584 152097747 -14552549 - B4A SINE B4 -131 161 2 1 1745 3366 225 47 102 chrX 152097910 152099103 -14551193 - Lx7 LINE L1 0 7696 6570 1 1745 734 280 17 6 chrX 152099505 152099681 -14550615 + B4A SINE B4 108 285 -7 1 1745 671 171 94 41 chrX 152099681 152099852 -14550444 + ORR1C1 LTR MaLR 1 180 -198 1 1745 591 85 0 0 chrX 152099881 152099963 -14550333 + (TCCCC)n Simple_repeat Simple_repeat 5 86 0 1 1745 475 253 103 32 chrX 152099965 152100120 -14550176 + ORR1C1 LTR MaLR 168 333 -51 1 1745 899 184 37 16 chrX 152100923 152101166 -14549130 + Lx9 LINE L1 7396 7643 -1 1 1745 294 296 99 0 chrX 152101258 152101339 -14548957 + RSINE1 SINE B4 5 93 -72 1 1745 3504 109 14 0 chrX 152101828 152102388 -14547908 - L1_Mur1 LINE L1 -1332 4554 3987 1 1745 3552 101 131 0 chrX 152102396 152102940 -14547356 + Lx3B LINE L1 6351 6965 -8 1 1745 14878 203 54 39 chrX 152102960 152107515 -14542781 + Lx5 LINE L1 2448 7050 0 1 1745 209 61 59 39 chrX 152107522 152107592 -14542704 + (TA)n Simple_repeat Simple_repeat 1 71 0 1 1745 2028 127 21 9 chrX 152107927 152108252 -14542044 - ORR1A4 LTR MaLR 0 329 1 1 1745 256 250 94 42 chrX 152108351 152108447 -14541849 - MLT1I LTR MaLR 0 411 311 1 1745 210 310 41 27 chrX 152109024 152109097 -14541199 + L3 LINE CR1 4015 4088 -401 1 1745 195 301 172 0 chrX 152109093 152109186 -14541110 - L2a LINE L2 -2 3424 3316 1 1745 299 314 11 11 chrX 152109473 152109560 -14540736 + PB1D10 SINE Alu 31 117 0 1 1745 609 356 23 0 chrX 152110091 152110265 -14540031 + ID_B1 SINE B4 30 207 -17 1 1745 290 326 42 98 chrX 152110154 152110297 -14539999 + B1F SINE Alu 13 147 -2 1 1745 476 342 19 31 chrX 152110743 152110903 -14539393 - RSINE1 SINE B4 -6 159 2 1 1745 819 55 0 0 chrX 152110950 152111059 -14539237 + (TG)n Simple_repeat Simple_repeat 1 109 0 1 1745 1273 131 0 47 chrX 152111123 152111355 -14538941 + L1_Mm LINE L1 4566 4786 -1097 1 1745 1293 101 17 0 chrX 152111408 152111586 -14538710 - B2_Mm2 SINE B2 -14 181 1 1 1745 4239 145 43 24 chrX 152111684 152112476 -14537820 + RMER17D2 LTR ERVK 3 809 0 1 1745 1150 312 80 25 chrX 152112543 152113134 -14537162 - Lx9 LINE L1 -206 7438 6816 1 1745 706 267 55 83 chrX 152113173 152113218 -14537078 - L1_Rod LINE L1 -77 5770 5727 1 1745 1166 69 0 0 chrX 152113218 152113363 -14536933 + B1_Mus2 SINE Alu 2 146 -1 1 1745 706 267 55 83 chrX 152113363 152113644 -14536652 - L1_Rod LINE L1 -121 5726 5453 1 1745 648 97 0 0 chrX 152113783 152113876 -14536420 + (TC)n Simple_repeat Simple_repeat 1 93 0 1 1745 1924 319 83 25 chrX 152113880 152114879 -14535417 - Lx9 LINE L1 -136 7508 6452 1 1745 222 227 0 0 chrX 152115615 152115659 -14534637 + GA-rich Low_complexity Low_complexity 2 45 0 1 1745 282 330 65 9 chrX 152115792 152115869 -14534427 - FordPrefect DNA Tip100 -2 1681 1599 1 1745 360 0 0 0 chrX 152115869 152115909 -14534387 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1745 282 330 65 9 chrX 152115909 152115938 -14534358 - FordPrefect DNA Tip100 -85 1598 1569 1 1745 37388 51 12 4 chrX 152116225 152122722 -14527574 - L1Md_T LINE L1 0 6582 99 1 1745 785 294 118 23 chrX 152122736 152123042 -14527254 - FordPrefect DNA Tip100 -443 1240 906 1 1745 357 177 100 12 chrX 152123339 152123419 -14526877 - MER53 DNA hAT 0 193 107 1 1745 286 177 200 12 chrX 152123353 152123433 -14526863 + MER53 DNA hAT 25 119 -74 1 1745 344 22 22 0 chrX 152123474 152123519 -14526777 + (CATA)n Simple_repeat Simple_repeat 3 48 0 1 1745 27 29 0 0 chrX 152123655 152123689 -14526607 + AT_rich Low_complexity Low_complexity 1 34 0 1 1745 269 158 36 12 chrX 152124004 152124087 -14526209 + (TA)n Simple_repeat Simple_repeat 2 86 0 1 1745 297 75 0 0 chrX 152124138 152124178 -14526118 - ORR1D1 LTR MaLR 0 370 331 1 1745 642 212 20 14 chrX 152124180 152124328 -14525968 - ORR1D1 LTR MaLR -225 149 1 1 1745 1278 20 0 0 chrX 152124976 152125125 -14525171 + (GGGAGA)n Simple_repeat Simple_repeat 3 151 0 1 1745 25 0 0 0 chrX 152125863 152125888 -14524408 + AT_rich Low_complexity Low_complexity 1 25 0 1 1745 506 283 5 143 chrX 152125908 152126118 -14524178 + B3A SINE B2 17 197 -1 1 1745 186 282 44 66 chrX 152126356 152126447 -14523849 - MIRc SINE MIR -52 216 128 1 1745 21 0 0 0 chrX 152126664 152126685 -14523611 + AT_rich Low_complexity Low_complexity 1 21 0 1 1745 779 53 9 0 chrX 152127046 152127159 -14523137 + (TCTA)n Simple_repeat Simple_repeat 3 116 0 1 1745 245 51 26 0 chrX 152128023 152128062 -14522234 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 1 1745 250 328 126 8 chrX 152128200 152128439 -14521857 + L2b LINE L2 3042 3318 -69 1 1745 524 352 56 0 chrX 152128741 152128954 -14521342 + MIR SINE MIR 8 232 -30 2 1745 202 191 0 0 chrX 152129097 152129132 -14521164 + T-rich Low_complexity Low_complexity 13 47 0 2 1745 4596 102 76 0 chrX 152129132 152129806 -14520490 - Lx3A LINE L1 0 6981 6257 2 1745 202 191 0 0 chrX 152129806 152129817 -14520479 + T-rich Low_complexity Low_complexity 2 12 0 2 1745 4291 109 26 6 chrX 152129824 152130469 -14519827 - Lx LINE L1 -7 6647 5990 2 1745 1092 101 0 0 chrX 152130520 152130668 -14519628 - B1_Mus1 SINE Alu 0 148 1 2 1745 366 300 64 99 chrX 152130912 152131348 -14518948 - L1ME3A LINE L1 -162 6011 5591 2 1745 24 32 0 0 chrX 152133590 152133621 -14516675 + AT_rich Low_complexity Low_complexity 1 31 0 2 1745 188 311 172 38 chrX 152133971 152134128 -14516168 - MER5B DNA MER1_type 0 178 1 2 1745 228 307 116 41 chrX 152134535 152134681 -14515615 + MIR SINE MIR 96 252 -10 2 1745 183 42 0 0 chrX 152135499 152135523 -14514773 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 1745 3426 124 21 4 chrX 152135525 152136041 -14514255 - Lx LINE L1 -8 6646 6122 2 1745 1289 92 0 0 chrX 152136041 152136225 -14514071 + L1_Mus4 LINE L1 5924 6107 -529 2 1745 1151 112 6 0 chrX 152136875 152137054 -14513242 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2 1745 220 72 23 45 chrX 152137095 152137139 -14513157 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2 1745 6261 129 2 67 chrX 152137424 152138601 -14511695 + L1VL1 LINE L1 1 1100 -5322 2 1745 498 211 25 1 chrX 152138603 152138729 -14511567 + L1Md_A LINE L1 446 558 -6166 2 1745 5247 37 23 6 chrX 152138729 152139379 -14510917 + L1Md_F3 LINE L1 5923 6583 -1 2 1745 21199 131 14 2 chrX 152139381 152142493 -14507803 + L1Md_A LINE L1 1312 4447 -1436 2 1745 297 0 0 0 chrX 152142493 152142526 -14507770 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 1745 21199 131 14 2 chrX 152142526 152143038 -14507258 + L1Md_A LINE L1 4448 4977 -906 2 1745 5615 84 12 16 chrX 152143044 152143847 -14506449 + L1_Mus2 LINE L1 5766 6565 -1 2 1745 368 340 82 25 chrX 152144262 152144506 -14505790 - L1MB8 LINE L1 -262 5916 5659 2 1745 276 311 0 86 chrX 152144550 152144631 -14505665 - B1F1 SINE Alu -61 88 15 2 1745 415 295 163 0 chrX 152144576 152144705 -14505591 - ID_B1 SINE B4 -73 151 2 2 1745 490 294 57 14 chrX 152144707 152145003 -14505293 - L1MD LINE L1 -755 5604 5296 2 1745 267 259 36 60 chrX 152145001 152145169 -14505127 - L1MB4 LINE L1 0 6180 6017 2 1745 512 259 168 19 chrX 152145625 152145986 -14504310 - L1MB4 LINE L1 -167 6013 5599 2 1745 306 257 50 41 chrX 152145985 152146204 -14504092 + L1M4 LINE L1 5079 5299 -847 2 1745 288 77 0 0 chrX 152146365 152146404 -14503892 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1745 3241 286 50 28 chrX 152146409 152148062 -14502234 - Lx9 LINE L1 -170 7474 5554 2 1745 589 314 68 94 chrX 152148071 152148306 -14501990 - B4A SINE B4 -62 230 2 2 1745 31 0 0 0 chrX 152148403 152148434 -14501862 + AT_rich Low_complexity Low_complexity 1 31 0 2 1745 241 398 92 0 chrX 152150131 152150229 -14500067 - RSINE1 SINE B4 -1 164 58 2 1745 243 339 54 39 chrX 152150556 152150685 -14499611 - MER5A DNA MER1_type 0 189 59 2 1745 783 249 74 5 chrX 152151606 152151808 -14498488 + B3 SINE B2 1 216 0 2 1745 3715 74 16 0 chrX 152152118 152152607 -14497689 + L1_Mus1 LINE L1 6070 6566 -1 2 1745 3377 141 35 7 chrX 152152746 152153283 -14497013 - Lx4A LINE L1 -4 7054 6503 2 1745 443 291 59 33 chrX 152153976 152154129 -14496167 - MER5A DNA MER1_type -6 183 27 2 1745 1033 161 61 20 chrX 152155078 152155274 -14495022 - ORR1D1 LTR MaLR 0 374 171 2 1745 554 28 14 0 chrX 152155289 152155361 -14494935 + (GA)n Simple_repeat Simple_repeat 2 74 0 2 1745 230 146 0 0 chrX 152155362 152155403 -14494893 + (CAGAGA)n Simple_repeat Simple_repeat 6 46 0 2 1745 380 63 0 31 chrX 152156339 152156404 -14493892 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 2 1745 770 234 0 0 chrX 152157069 152157206 -14493090 - B1_Mur1 SINE Alu -6 143 7 2 1745 4361 201 40 1 chrX 152157492 152158322 -14491974 + Lx5 LINE L1 6188 7049 -1 2 1745 3490 43 28 5 chrX 152158328 152158753 -14491543 - RLTR10C LTR ERVK 0 436 2 2 1745 351 0 0 0 chrX 152158753 152158792 -14491504 + (CTAA)n Simple_repeat Simple_repeat 4 42 0 2 1745 5150 149 10 1 chrX 152159302 152160223 -14490073 - L1_Mus4 LINE L1 -525 5358 4430 2 1745 6955 102 2 10 chrX 152160220 152161474 -14488822 + L1_Mus4 LINE L1 5364 6607 -29 2 1745 992 72 63 35 chrX 152161485 152161628 -14488668 - B1_Mus1 SINE Alu 0 148 2 2 1745 2823 79 15 41 chrX 152162269 152162680 -14487616 - MTB LTR MaLR 0 400 1 2 1745 280 204 0 79 chrX 152163125 152163226 -14487070 - Lx7 LINE L1 -45 7651 7559 2 1745 468 35 0 0 chrX 152163245 152163303 -14486993 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1745 264 77 0 0 chrX 152163341 152163380 -14486916 + (TA)n Simple_repeat Simple_repeat 2 40 0 2 1745 985 221 161 10 chrX 152163383 152163807 -14486489 - Lx7 LINE L1 -312 7384 6897 2 1745 26 50 0 0 chrX 152163958 152163998 -14486298 + AT_rich Low_complexity Low_complexity 1 40 0 2 1745 2169 205 35 2 chrX 152164004 152164409 -14485887 - MTC LTR MaLR 0 421 4 2 1745 4931 137 10 10 chrX 152164413 152165528 -14484768 + L1Md_A LINE L1 241 1325 -5335 2 1745 360 42 0 0 chrX 152165531 152165579 -14484717 - L1_Mm LINE L1 -1037 4846 4799 2 1745 630 51 0 0 chrX 152165582 152165661 -14484635 + L1Md_F3 LINE L1 5507 5585 -298 2 1745 8063 32 8 6 chrX 152165662 152166644 -14483652 + L1Md_F3 LINE L1 5587 6570 -14 2 1745 8057 144 35 5 chrX 152167004 152168304 -14481992 - Lx2B LINE L1 -5 6995 5657 2 1745 1716 51 5 0 chrX 152168305 152168521 -14481775 - MTB LTR MaLR -1 399 183 2 1745 3847 80 43 11 chrX 152168540 152169100 -14481196 - L1Md_F2 LINE L1 0 6582 6005 2 1745 6853 32 2 7 chrX 152169099 152169928 -14480368 - L1Md_F3 LINE L1 -1 6583 5759 2 1745 1340 118 19 11 chrX 152169941 152170159 -14480137 - MTB LTR MaLR -163 216 1 2 1745 4746 198 2 11 chrX 152170159 152171124 -14479172 - L1_Mur2 LINE L1 -222 5655 4700 2 1745 2100 104 10 3 chrX 152171172 152171479 -14478817 - L1_Mus3 LINE L1 -9 6629 6321 2 1745 5666 103 8 3 chrX 152171479 152172339 -14477957 - L1Md_F LINE L1 -3190 2693 1830 2 1745 528 16 0 0 chrX 152172339 152172400 -14477896 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 1745 964 62 0 0 chrX 152172400 152172528 -14477768 - L1_Mus1 LINE L1 -3 6564 6437 2 1745 3188 109 18 12 chrX 152172528 152173021 -14477275 + L1_Mm LINE L1 5049 5544 -339 2 1745 4112 127 6 2 chrX 152173021 152174189 -14476107 - L1Md_F LINE L1 -4044 1839 668 2 1745 869 152 12 0 chrX 152174174 152174345 -14475951 - MusHAL1 LINE L1 -2574 780 608 2 1745 1169 71 0 0 chrX 152174359 152174513 -14475783 - L1_Mus3 LINE L1 -717 5921 5768 2 218 379 336 56 45 chrX 152174575 152174801 -14475495 + RSINE1 SINE B4 2 234 -58 2 1746 252 225 85 24 chrX 152174781 152174863 -14475433 + RSINE1 SINE B4 78 164 -1 2 1746 318 330 68 54 chrX 152174872 152175151 -14475145 + L1M5 LINE L1 5025 5307 -839 2 1746 21 57 0 0 chrX 152175246 152175281 -14475015 + AT_rich Low_complexity Low_complexity 1 35 0 2 1746 1187 171 18 9 chrX 152175625 152175844 -14474452 - URR1B DNA MER1_type 0 225 5 2 1746 23 33 0 0 chrX 152176486 152176516 -14473780 + AT_rich Low_complexity Low_complexity 1 30 0 2 1746 337 88 191 0 chrX 152177283 152177351 -14472945 - Lx9 LINE L1 -22 7622 7542 2 1746 3225 199 22 24 chrX 152177542 152178675 -14471621 + L1VL4 LINE L1 466 1601 -1958 2 1746 3859 178 20 48 chrX 152178691 152179551 -14470745 + L1_Mur2 LINE L1 4121 4956 -921 2 1746 7312 62 16 6 chrX 152179674 152181101 -14469195 - L1Md_F2 LINE L1 0 6582 5146 2 1746 831 159 199 0 chrX 152181100 152181276 -14469020 + L1_Mur2 LINE L1 4955 5165 -712 2 1746 2688 124 2 0 chrX 152181283 152181711 -14468585 + L1_Mm LINE L1 2026 2454 -3429 2 1746 4689 233 70 84 chrX 152181710 152182338 -14467958 - L1VL4 LINE L1 -376 3239 2601 2 1746 5727 46 0 3 chrX 152182338 152183038 -14467258 - L1Md_T LINE L1 0 6582 5885 2 1746 4689 233 70 84 chrX 152183038 152183627 -14466669 - L1VL4 LINE L1 -1015 2600 2066 2 1746 1347 72 0 0 chrX 152183627 152183807 -14466489 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2 1746 4689 219 59 70 chrX 152183807 152185036 -14465260 - L1VL4 LINE L1 -1550 2065 825 2 1746 351 0 0 0 chrX 152185036 152185075 -14465221 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1746 2654 161 21 6 chrX 152185075 152185418 -14464878 - L1VL4 LINE L1 -5511 824 443 2 1746 928 116 115 6 chrX 152185502 152185667 -14464629 - B2_Mm2 SINE B2 -11 184 2 2 1746 349 233 48 15 chrX 152185766 152185907 -14464389 - L1M3 LINE L1 -992 5151 5004 2 1746 757 240 70 5 chrX 152186126 152186327 -14463969 - B3 SINE B2 0 216 3 2 1746 315 233 0 11 chrX 152186438 152186525 -14463771 - Lx7 LINE L1 0 7696 7611 2 1746 564 247 157 32 chrX 152186566 152186846 -14463450 - Lx7 LINE L1 -175 7521 7207 2 1746 220 254 14 14 chrX 152187191 152187263 -14463033 + GA-rich Low_complexity Low_complexity 4 75 0 2 1746 624 183 137 63 chrX 152187660 152187835 -14462461 + URR1A DNA MER1_type 1 188 -38 2 1746 234 378 0 12 chrX 152187905 152187988 -14462308 + PB1D7 SINE Alu 2 83 -37 2 1746 21 0 0 0 chrX 152188043 152188064 -14462232 + AT_rich Low_complexity Low_complexity 1 21 0 2 1746 897 274 79 24 chrX 152188600 152188854 -14461442 + RCHARR1 DNA MER1_type 1 268 -706 2 1746 313 365 0 7 chrX 152189414 152189560 -14460736 - RSINE1 SINE B4 -17 148 4 2 1746 430 315 18 0 chrX 152190105 152190216 -14460080 - PB1D7 SINE Alu 0 120 8 2 1746 197 222 0 0 chrX 152190322 152190367 -14459929 + MIRc SINE MIR 110 154 -114 2 1746 1023 39 0 0 chrX 152190746 152190874 -14459422 + (GA)n Simple_repeat Simple_repeat 1 128 0 2 1746 664 154 120 23 chrX 152191055 152191188 -14459108 + B1_Mur3 SINE Alu 1 146 -3 2 1746 549 55 0 0 chrX 152191536 152191609 -14458687 + (TG)n Simple_repeat Simple_repeat 1 73 0 2 1746 182 281 136 68 chrX 152191634 152191737 -14458559 + L2c LINE L2 3137 3246 -141 2 1746 240 157 279 81 chrX 152191991 152192075 -14458221 + Lx9 LINE L1 7437 7547 -97 2 1746 483 18 0 0 chrX 152192075 152192131 -14458165 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1746 261 145 48 0 chrX 152192131 152192193 -14458103 + Lx9 LINE L1 7579 7643 -1 2 1746 228 67 0 0 chrX 152192768 152192798 -14457498 + (CATA)n Simple_repeat Simple_repeat 2 31 0 2 1746 342 0 0 0 chrX 152192798 152192835 -14457461 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1746 450 0 0 0 chrX 152192835 152192884 -14457412 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 1746 22 0 0 0 chrX 152193393 152193415 -14456881 + AT_rich Low_complexity Low_complexity 1 22 0 3 1746 335 298 16 47 chrX 152193752 152193879 -14456417 - MLT1H2 LTR MaLR -304 185 63 3 1746 243 61 0 0 chrX 152194389 152194422 -14455874 + (A)n Simple_repeat Simple_repeat 1 33 0 3 1746 183 333 100 40 chrX 152195316 152195466 -14454830 + MIRc SINE MIR 108 266 -2 3 1746 6070 133 35 2 chrX 152196886 152198011 -14452285 - Lx LINE L1 -695 5959 4802 3 1746 4433 120 36 12 chrX 152198011 152198703 -14451593 + Lx LINE L1 5946 6654 0 3 1746 387 250 11 35 chrX 152198845 152198932 -14451364 + MER5A DNA MER1_type 32 116 -73 3 1746 636 321 19 0 chrX 152199117 152199276 -14451020 - RSINE1 SINE B4 -1 164 3 3 1746 180 97 0 0 chrX 152199334 152199365 -14450931 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1746 615 225 9 0 chrX 152199378 152199489 -14450807 - B1_Mur1 SINE Alu -36 113 2 3 1746 362 333 59 59 chrX 152199489 152199542 -14450754 - B4 SINE B4 -89 198 35 3 1746 26 82 0 0 chrX 152200297 152200358 -14449938 + AT_rich Low_complexity Low_complexity 1 61 0 3 1746 429 20 0 0 chrX 152200426 152200476 -14449820 + (CAAG)n Simple_repeat Simple_repeat 2 51 0 3 1746 395 274 18 0 chrX 152200577 152200690 -14449606 - Lx7 LINE L1 -389 7307 7193 3 1746 1049 136 6 0 chrX 152200726 152200903 -14449393 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 3 1746 954 88 88 0 chrX 152200921 152201057 -14449239 - B1_Mus1 SINE Alu 0 148 1 3 1746 336 246 29 14 chrX 152201076 152201216 -14449080 - Lx7 LINE L1 -146 7550 7409 3 1746 2033 197 51 3 chrX 152201420 152201791 -14448505 - Lx6 LINE L1 -311 7149 6761 3 1746 1677 81 0 8 chrX 152201791 152202027 -14448269 - L1Md_F2 LINE L1 -12 6570 6337 3 1746 1441 44 6 11 chrX 152202035 152202218 -14448078 + L1Md_F2 LINE L1 6114 6295 -287 3 1746 619 131 0 93 chrX 152202212 152202330 -14447966 - Lx6 LINE L1 -688 6772 6666 3 1746 426 301 26 0 chrX 152202693 152202806 -14447490 - MER102c DNA MER1_type -14 317 202 3 1746 1147 27 0 7 chrX 152204517 152204664 -14445632 + L1Md_F3 LINE L1 6422 6567 -17 3 1746 253 237 26 0 chrX 152204690 152204766 -14445530 + CT-rich Low_complexity Low_complexity 2 79 0 3 1746 446 301 80 102 chrX 152204945 152205318 -14444978 - MLT1A LTR MaLR -6 368 4 3 1746 327 330 44 9 chrX 152205774 152205887 -14444409 - MER5B DNA MER1_type -7 171 55 3 1746 3483 228 25 17 chrX 152206056 152207176 -14443120 + Lx7 LINE L1 5318 6450 -1246 3 1746 21 71 0 0 chrX 152207238 152207280 -14443016 + AT_rich Low_complexity Low_complexity 1 42 0 3 1746 483 394 70 56 chrX 152209128 152209542 -14440754 + LTR16A LTR ERVL 27 446 -5 3 1746 240 143 0 0 chrX 152209708 152209750 -14440546 + (TAAG)n Simple_repeat Simple_repeat 2 43 0 3 1746 4092 11 0 0 chrX 152209876 152210343 -14439953 + L1Md_T LINE L1 5120 5586 -297 3 1746 8132 49 1 0 chrX 152210343 152211338 -14438958 + L1Md_T LINE L1 5587 6582 0 3 1746 402 192 67 2 chrX 152211982 152212078 -14438218 + B1_Mur2 SINE Alu 19 149 0 3 1746 622 218 146 101 chrX 152212155 152212311 -14437985 - B3 SINE B2 -8 208 42 3 1746 736 183 0 27 chrX 152212311 152212457 -14437839 - B1_Mus2 SINE Alu -4 143 2 3 1746 622 218 146 101 chrX 152212457 152212499 -14437797 - B3 SINE B2 -175 41 1 3 1746 359 305 0 0 chrX 152212532 152212614 -14437682 - PB1D10 SINE Alu -20 97 16 3 1746 791 187 0 32 chrX 152212873 152213028 -14437268 + B1_Mur4 SINE Alu 1 150 0 3 1746 21 0 0 0 chrX 152213028 152213049 -14437247 + AT_rich Low_complexity Low_complexity 1 21 0 3 1746 2857 15 0 43 chrX 152213253 152213605 -14436691 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 1746 21292 39 26 14 chrX 152213605 152216242 -14434054 + IAPEz-int LTR ERVK 8 2674 -3807 3 1746 9435 21 3 1 chrX 152216220 152217297 -14432999 + IAPEz-int LTR ERVK 5403 6481 0 3 1746 2857 15 0 43 chrX 152217297 152217649 -14432647 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 1746 1491 71 9 0 chrX 152218017 152218229 -14432067 - L1Md_F2 LINE L1 -2 6580 6367 3 1746 362 274 175 15 chrX 152218646 152218783 -14431513 - MER5B DNA MER1_type -8 170 12 3 1746 414 0 0 0 chrX 152218872 152218918 -14431378 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1746 342 367 89 47 chrX 152220061 152220318 -14429978 - LTR16C LTR ERVL -218 271 4 3 1746 503 90 0 13 chrX 152220406 152220485 -14429811 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 1746 212 161 0 0 chrX 152220490 152220521 -14429775 - B1_Mur1 SINE Alu -21 128 98 3 1746 212 242 14 70 chrX 152220491 152220562 -14429734 - B1F1 SINE Alu -80 69 3 3 1746 334 278 185 0 chrX 152222612 152222763 -14427533 - MER53 DNA hAT -2 191 13 3 1746 581 276 175 21 chrX 152222848 152223174 -14427122 + MTEb LTR MaLR 4 379 0 3 1746 216 342 16 49 chrX 152223350 152223468 -14426828 + MIRb SINE MIR 111 234 -28 3 1746 315 0 0 0 chrX 152225098 152225133 -14425163 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1746 309 26 0 0 chrX 152225134 152225172 -14425124 + (GA)n Simple_repeat Simple_repeat 2 39 0 3 1746 1892 130 27 3 chrX 152225277 152225578 -14424718 - Lx LINE L1 -5 6649 6342 3 1746 1666 112 29 0 chrX 152225578 152225818 -14424478 + Lx LINE L1 6094 6340 -314 3 1746 394 390 9 33 chrX 152225823 152226035 -14424261 - Charlie8 DNA MER1_type -2181 247 41 3 1746 617 45 0 0 chrX 152226317 152226405 -14423891 - L1_Mus3 LINE L1 -6 6632 6545 3 1746 2711 91 32 2 chrX 152226469 152226878 -14423418 - BGLII LTR ERVK 0 421 1 3 1746 198 257 84 14 chrX 152227554 152227625 -14422671 + MIRb SINE MIR 116 191 -77 3 1746 324 341 21 64 chrX 152228179 152228320 -14421976 + MER5A1 DNA MER1_type 17 151 -15 3 1746 447 19 0 0 chrX 152229082 152229134 -14421162 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 1746 2184 178 164 32 chrX 152229543 152230078 -14420218 + RMER6C LTR ERVK 85 690 0 3 1746 686 303 74 49 chrX 152231358 152231622 -14418674 + B4A SINE B4 1 272 -20 3 1746 435 106 0 0 chrX 152231622 152231688 -14418608 + (TA)n Simple_repeat Simple_repeat 1 66 0 3 1746 686 303 74 49 chrX 152231688 152231708 -14418588 + B4A SINE B4 273 292 0 3 1746 202 193 35 17 chrX 152231725 152231783 -14418513 + (TATATG)n Simple_repeat Simple_repeat 5 63 0 3 1746 8528 22 3 1 chrX 152231963 152232939 -14417357 + RLTR13A3 LTR ERVK 1 978 0 3 1746 21 36 0 0 chrX 152233004 152233032 -14417264 + AT_rich Low_complexity Low_complexity 1 28 0 3 1746 600 291 136 10 chrX 152233763 152234058 -14416238 - L1MB5 LINE L1 -10 6164 5833 3 1746 213 184 55 0 chrX 152234072 152234181 -14416115 + (TA)n Simple_repeat Simple_repeat 2 116 0 3 1746 675 319 0 14 chrX 152234192 152234399 -14415897 - Lx7 LINE L1 -898 6798 6595 3 1746 245 135 0 0 chrX 152234605 152234642 -14415654 - L1MB5 LINE L1 -561 5623 5587 3 1746 434 319 41 28 chrX 152234970 152235115 -14415181 - MER20 DNA MER1_type -3 216 70 3 1746 2915 276 149 30 chrX 152235147 152236329 -14413967 + Lx7 LINE L1 6000 7360 -336 3 1746 3020 170 60 15 chrX 152236326 152236912 -14413384 - Lx2B LINE L1 -23 6977 6366 3 1746 233 228 211 0 chrX 152237136 152237193 -14413103 - tRNA-Ala-GCA tRNA tRNA -2 73 5 3 1746 1489 233 57 15 chrX 152237270 152237649 -14412647 - MTD LTR MaLR -14 405 18 3 1746 6481 73 13 11 chrX 152238301 152239174 -14411122 - L1_Mus1 LINE L1 0 6567 5694 3 1746 1220 191 4 0 chrX 152239862 152240087 -14410209 + URR1A DNA MER1_type 1 226 0 3 1746 1767 199 30 0 chrX 152240958 152241290 -14409006 + Lx4A LINE L1 6715 7056 -2 3 1746 206 322 57 48 chrX 152241796 152241920 -14408376 - L3 LINE CR1 -907 3582 3458 3 1746 559 256 97 32 chrX 152242027 152242213 -14408083 + MER58A DNA MER1_type 27 224 0 3 1746 1478 343 110 39 chrX 152242234 152243495 -14406801 + L2 LINE L2 1731 3081 -338 3 1746 26 0 0 0 chrX 152243549 152243575 -14406721 + AT_rich Low_complexity Low_complexity 1 26 0 3 1746 313 260 48 39 chrX 152243934 152244038 -14406258 + L1M5 LINE L1 2942 3046 -3100 3 1746 1533 280 53 20 chrX 152244295 152244751 -14405545 + Lx8 LINE L1 7001 7471 -2 3 1746 505 358 128 0 chrX 152244922 152245126 -14405170 + Tigger5 DNA MER2_type 8 237 -2169 3 1746 282 203 85 92 chrX 152245183 152245324 -14404972 - L1MA8 LINE L1 -1 6299 6160 3 1746 734 267 146 25 chrX 152245458 152245615 -14404681 - L1M2 LINE L1 -863 5280 5092 3 1746 1262 7 7 0 chrX 152245615 152245762 -14404534 + (TTTC)n Simple_repeat Simple_repeat 2 149 0 3 1746 734 267 146 25 chrX 152245762 152246035 -14404261 - L1M2 LINE L1 -1052 5091 4799 3 1746 7467 95 14 1 chrX 152246105 152246863 -14403433 - L1_Mus3 LINE L1 -1 6637 5875 3 1746 278 26 26 0 chrX 152246863 152246902 -14403394 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1746 11030 94 3 1 chrX 152246902 152248435 -14401861 - L1_Mus3 LINE L1 -764 5874 4329 3 1746 417 253 23 114 chrX 152248444 152248550 -14401746 - L1M2 LINE L1 -1359 4784 4676 3 1746 687 81 0 0 chrX 152248550 152248649 -14401647 + (TC)n Simple_repeat Simple_repeat 2 100 0 3 1746 417 253 23 114 chrX 152248649 152248805 -14401491 - L1M2 LINE L1 -1468 4675 4546 3 1746 1243 295 51 47 chrX 152248864 152249425 -14400871 - L1MA8 LINE L1 -183 6108 5545 3 1746 6127 84 8 1 chrX 152249425 152250266 -14400030 - Lx3_Mus LINE L1 -8 7001 6155 3 1746 1243 295 51 47 chrX 152250266 152250366 -14399930 - L1MA8 LINE L1 -747 5544 5444 3 1746 371 318 82 15 chrX 152250510 152250644 -14399652 - B1F SINE Alu -1 148 6 3 1746 22 0 0 0 chrX 152250731 152250753 -14399543 + AT_rich Low_complexity Low_complexity 1 22 0 3 1746 31 68 0 0 chrX 152250787 152250846 -14399450 + AT_rich Low_complexity Low_complexity 1 59 0 3 1746 273 312 26 90 chrX 152251769 152251924 -14398372 - MLT1H LTR MaLR -399 150 6 3 1746 676 116 83 0 chrX 152252784 152252905 -14397391 + L1_Mus3 LINE L1 6502 6632 -6 3 1746 257 0 0 29 chrX 152253021 152253055 -14397241 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1746 264 59 0 0 chrX 152253481 152253515 -14396781 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 1746 6056 116 11 17 chrX 152253534 152254447 -14395849 - Lx3_Mus LINE L1 0 7009 6098 3 1746 6905 58 16 8 chrX 152254447 152255333 -14394963 + RLTR13B1 LTR ERVK 1 893 0 3 1746 6056 116 11 17 chrX 152255333 152255381 -14394915 - Lx3_Mus LINE L1 -912 6097 6053 3 1746 1727 281 23 53 chrX 152256390 152256988 -14393308 + Lx9 LINE L1 503 1082 -6526 3 1746 7333 229 131 113 chrX 152256965 152258412 -14391884 + Lx9 LINE L1 1742 3237 -2610 3 1746 711 35 0 0 chrX 152258412 152258498 -14391798 + (GA)n Simple_repeat Simple_repeat 2 87 0 3 1746 7333 229 131 113 chrX 152258498 152259880 -14390416 + Lx9 LINE L1 3238 4658 -1189 3 1746 2046 142 0 0 chrX 152259880 152260217 -14390079 + Lx2 LINE L1 6659 6995 -2 3 1746 7333 229 131 113 chrX 152260217 152260250 -14390046 + Lx9 LINE L1 4659 4759 -1088 3 1746 965 218 34 72 chrX 152260250 152260512 -14389784 - ORR1A4 LTR MaLR -77 252 1 3 1746 7333 229 131 113 chrX 152260512 152260594 -14389702 + Lx9 LINE L1 4760 5022 -825 3 1746 405 0 0 0 chrX 152260594 152260639 -14389657 + (TTCC)n Simple_repeat Simple_repeat 1 45 0 4 1746 1046 140 0 6 chrX 152260639 152260819 -14389477 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 4 1746 7333 229 121 106 chrX 152260819 152261732 -14388564 + Lx9 LINE L1 5023 5972 -1672 3 1746 2108 182 96 4 chrX 152261740 152262234 -14388062 + RMER4B LTR ERVK 17 585 0 4 1746 2895 224 50 36 chrX 152262282 152263193 -14387103 + Lx9 LINE L1 6122 7095 -549 3 1746 237 322 144 0 chrX 152264682 152264772 -14385524 - B1F1 SINE Alu -38 111 9 4 1746 252 0 0 0 chrX 152265759 152265787 -14384509 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1746 1157 223 42 10 chrX 152266003 152266315 -14383981 - L1_Mur3 LINE L1 -2030 3850 3529 4 1746 34696 66 4 1 chrX 152266316 152271623 -14378673 - L1Md_F2 LINE L1 0 6582 1262 4 1746 2112 58 3 89 chrX 152271614 152271938 -14378358 - L1Md_F2 LINE L1 -5651 965 670 4 1746 1647 176 3 0 chrX 152271930 152272219 -14378077 - L1Md_F2 LINE L1 -6078 538 249 4 1746 686 200 107 24 chrX 152272217 152272422 -14377874 - L1_Mur3 LINE L1 -2335 3545 3324 4 1746 366 115 69 0 chrX 152272423 152272510 -14377786 - Lx3_Mus LINE L1 -17 6992 6900 4 1746 7625 93 17 5 chrX 152272519 152274298 -14375998 - Lx3_Mus LINE L1 -395 6614 4815 4 1746 4318 94 6 25 chrX 152274295 152274979 -14375317 + Lx3_Mus LINE L1 4131 4801 -1085 4 1746 851 217 5 0 chrX 152274976 152275174 -14375122 - L1_Mur3 LINE L1 -2546 3334 3136 4 1746 4289 229 50 37 chrX 152275166 152276066 -14374230 - L1_Mur3 LINE L1 -3285 2595 1673 4 1746 6412 60 11 0 chrX 152276066 152276864 -14373432 - RLTR13C2 LTR ERVK 0 808 2 4 1746 4289 231 77 46 chrX 152276864 152277663 -14372633 - L1_Mur3 LINE L1 -4208 1672 838 4 1746 761 95 9 0 chrX 152278701 152278817 -14371479 + (TC)n Simple_repeat Simple_repeat 2 118 0 4 1746 226 180 33 0 chrX 152278830 152278891 -14371405 + (TA)n Simple_repeat Simple_repeat 1 63 0 4 1746 26 0 0 0 chrX 152278988 152279014 -14371282 + AT_rich Low_complexity Low_complexity 1 26 0 4 1746 20893 109 14 7 chrX 152279645 152283319 -14366977 - L1_Mus1 LINE L1 -3 6564 2889 4 1746 1241 50 6 0 chrX 152283319 152283480 -14366816 + (TTTC)n Simple_repeat Simple_repeat 3 164 0 4 1746 20893 120 17 7 chrX 152283480 152283760 -14366536 - L1_Mus1 LINE L1 -2995 2888 2580 4 1746 2744 12 95 6 chrX 152283760 152284097 -14366199 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1746 53988 31 16 4 chrX 152284097 152290494 -14359802 - IAPEz-int LTR ERVK 0 6481 8 4 1746 2744 12 95 6 chrX 152290494 152290831 -14359465 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1746 8811 126 4 35 chrX 152290831 152292415 -14357881 - L1_Mus1 LINE L1 -3300 2583 1124 4 1746 3209 77 16 0 chrX 152292415 152292846 -14357450 - L1_Mus1 LINE L1 -1 6566 6129 4 1746 1924 202 24 106 chrX 152292846 152293312 -14356984 - L1_Mus1 LINE L1 -5493 1123 677 4 1746 1045 102 0 33 chrX 152293312 152293464 -14356832 + B1_Mm SINE Alu 1 147 0 4 1746 1001 255 20 220 chrX 152293464 152293795 -14356501 - L1VL2 LINE L1 -5910 425 132 4 1746 1328 88 22 5 chrX 152294083 152294267 -14356029 + B2_Mm2 SINE B2 2 188 -7 4 1746 23 0 0 0 chrX 152295066 152295089 -14355207 + AT_rich Low_complexity Low_complexity 1 23 0 4 1746 229 252 0 36 chrX 152295120 152295231 -14355065 + T-rich Low_complexity Low_complexity 5 111 0 4 1746 570 175 0 0 chrX 152295965 152296108 -14354188 + CT-rich Low_complexity Low_complexity 1 143 0 4 1746 1658 302 92 20 chrX 152296108 152296388 -14353908 - Lx9 LINE L1 -290 7354 7026 4 1746 207 0 0 0 chrX 152296388 152296411 -14353885 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 4 1746 288 0 0 0 chrX 152296413 152296445 -14353851 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1746 1658 302 92 20 chrX 152296445 152296854 -14353442 - Lx9 LINE L1 -619 7025 6612 4 1746 630 254 58 7 chrX 152296854 152297067 -14353229 + L1_Rod LINE L1 4556 4828 -1315 4 1746 236 340 55 109 chrX 152297733 152297898 -14352398 + MLT1F1 LTR MaLR 389 544 -25 4 1746 210 143 0 0 chrX 152297975 152298010 -14352286 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 4 1746 806 98 8 0 chrX 152299173 152299295 -14351001 + (TTTC)n Simple_repeat Simple_repeat 4 126 0 4 1746 216 0 0 0 chrX 152299295 152299319 -14350977 + (TCCC)n Simple_repeat Simple_repeat 4 27 0 4 1746 1158 146 5 24 chrX 152299319 152299338 -14350958 - Lx3A LINE L1 -32 6949 6931 4 1746 324 0 0 0 chrX 152299338 152299374 -14350922 + (TTCC)n Simple_repeat Simple_repeat 1 36 0 4 1746 1158 146 5 24 chrX 152299374 152299564 -14350732 - Lx3A LINE L1 -51 6930 6744 4 1746 988 234 82 76 chrX 152299580 152299871 -14350425 - ORR1B1 LTR MaLR -59 335 43 4 1746 2411 198 77 14 chrX 152300295 152300864 -14349432 - Lx9 LINE L1 -4 7640 7036 4 1746 457 353 49 43 chrX 152301684 152301977 -14348319 + MLT1G LTR MaLR 4 271 -320 4 1746 633 97 0 0 chrX 152301999 152302102 -14348194 + (GA)n Simple_repeat Simple_repeat 2 104 0 4 1746 5673 113 6 1 chrX 152302321 152303172 -14347124 - L1_Mus3 LINE L1 -1 6637 5783 4 218 20591 126 7 11 chrX 152303179 152307321 -14342975 - L1_Mus2 LINE L1 0 6566 2453 4 1747 642 92 0 0 chrX 152307341 152307428 -14342868 - B1_Mus2 SINE Alu -60 87 1 4 1747 258 264 15 44 chrX 152307428 152307477 -14342819 - ORR1B1-int LTR MaLR -862 647 603 4 1747 39475 29 1 6 chrX 152307477 152313624 -14336672 - L1Md_A LINE L1 -41 6541 434 4 1747 6680 112 8 88 chrX 152313618 152314680 -14335616 - L1VL1 LINE L1 -1449 2249 1224 4 1747 1011 47 0 0 chrX 152314680 152314807 -14335489 + B1_Mus2 SINE Alu 21 147 0 4 1747 6680 112 8 88 chrX 152314807 152315874 -14334422 - L1VL1 LINE L1 -1449 1223 192 4 1747 240 304 0 98 chrX 152316138 152316240 -14334056 - B4 SINE B4 0 292 201 4 1747 546 130 0 0 chrX 152316242 152316350 -14333946 + (TC)n Simple_repeat Simple_repeat 1 108 0 4 1747 893 259 73 191 chrX 152316358 152316409 -14333887 - MT2A LTR ERVL -74 459 407 4 1747 306 0 0 0 chrX 152316409 152316443 -14333853 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 1747 893 259 73 191 chrX 152316443 152316460 -14333836 - MT2A LTR ERVL -127 406 403 4 1747 288 0 0 0 chrX 152316460 152316492 -14333804 + (TC)n Simple_repeat Simple_repeat 2 33 0 4 1747 555 16 0 0 chrX 152316492 152316555 -14333741 + (TA)n Simple_repeat Simple_repeat 1 64 0 4 1747 893 259 73 191 chrX 152316555 152317003 -14333293 - MT2A LTR ERVL -131 402 3 4 1747 503 320 31 8 chrX 152317003 152317128 -14333168 - B4 SINE B4 -163 129 2 4 1747 462 312 136 58 chrX 152317264 152317381 -14332915 - L1M5 LINE L1 -1268 4878 4760 4 1747 786 66 16 16 chrX 152317381 152317505 -14332791 - L1_Mus3 LINE L1 -15 6623 6500 4 1747 462 312 136 58 chrX 152317505 152318029 -14332267 - L1M5 LINE L1 -1387 4759 4187 4 1747 234 276 112 50 chrX 152318296 152318475 -14331821 - Lx8 LINE L1 -4 7469 7280 4 1747 342 296 37 0 chrX 152318490 152318598 -14331698 - Lx8 LINE L1 -282 7191 7080 4 1747 349 323 77 73 chrX 152319597 152319884 -14330412 + Charlie7 DNA MER1_type 1845 2132 -480 4 1747 319 279 21 41 chrX 152319957 152320054 -14330242 - PB1D10 SINE Alu 0 117 23 4 1747 183 100 0 0 chrX 152320086 152320116 -14330180 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 4 1747 246 257 40 13 chrX 152321812 152321887 -14328409 + ID4_ SINE ID 3 79 -4 4 1747 339 336 40 16 chrX 152323841 152323965 -14326331 - MLT1G3 LTR MaLR -189 406 280 4 1747 263 392 42 7 chrX 152324167 152324311 -14325985 - LTR16C LTR ERVL -49 440 292 4 1747 248 262 95 48 chrX 152324414 152324498 -14325798 - LTR16C LTR ERVL -194 295 208 4 1747 4690 143 16 7 chrX 152324526 152324678 -14325618 - RMER19A LTR ERVK 0 737 586 4 1747 513 47 0 0 chrX 152324678 152324742 -14325554 + (TTTTC)n Simple_repeat Simple_repeat 2 65 0 4 1747 4690 143 16 7 chrX 152324742 152325319 -14324977 - RMER19A LTR ERVK -152 585 1 4 1747 670 24 0 0 chrX 152325645 152325729 -14324567 - L1_Mm LINE L1 -2765 3118 3035 4 1747 514 302 7 7 chrX 152325729 152325869 -14324427 - RSINE1 SINE B4 -22 143 4 4 1747 463 325 84 88 chrX 152326071 152326368 -14323928 + MLT1A0 LTR MaLR 70 365 0 4 1747 1193 212 44 11 chrX 152327181 152327453 -14322843 - Lx9 LINE L1 -221 7423 7143 4 1747 619 247 57 0 chrX 152327496 152327654 -14322642 + Ricksha_0 DNA MuDR 1324 1490 -243 4 1747 219 36 0 0 chrX 152327661 152327689 -14322607 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 4 1747 6672 143 79 62 chrX 152327692 152328836 -14321460 + RMER12B LTR ERVK 1 1222 -182 4 1747 237 33 0 0 chrX 152328836 152328866 -14321430 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1747 6672 143 79 62 chrX 152328866 152328894 -14321402 + RMER12B LTR ERVK 1223 1246 -158 4 1747 480 35 0 0 chrX 152328894 152328952 -14321344 + (TC)n Simple_repeat Simple_repeat 2 59 0 4 1747 6672 143 79 62 chrX 152328952 152329159 -14321137 + RMER12B LTR ERVK 1247 1402 -2 4 1747 423 0 0 0 chrX 152329578 152329625 -14320671 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 1747 597 132 0 0 chrX 152329721 152329842 -14320454 + (TC)n Simple_repeat Simple_repeat 1 121 0 4 1747 1383 202 21 42 chrX 152329865 152330149 -14320147 - RMER20B LTR ERVK -349 278 1 4 1747 207 200 0 0 chrX 152330411 152330456 -14319840 + T-rich Low_complexity Low_complexity 1 45 0 4 1747 287 390 0 0 chrX 152330456 152330610 -14319686 - MERVK26-int LTR ERVK -1069 5850 5697 4 1747 874 311 102 39 chrX 152330907 152331547 -14318749 - MERVK26-int LTR ERVK -1519 5400 4721 4 1747 1198 337 44 48 chrX 152331558 152332463 -14317833 - MERVK26-int LTR ERVK -2345 4574 3668 4 1747 3024 61 15 5 chrX 152332463 152332859 -14317437 + MTB LTR MaLR 1 400 0 4 1747 1198 337 44 48 chrX 152332859 152332982 -14317314 - MERVK26-int LTR ERVK -3252 3667 3550 4 1747 1307 158 4 0 chrX 152332999 152333227 -14317069 - Lx LINE L1 0 6654 6426 4 1747 760 339 42 69 chrX 152333227 152333510 -14316786 - MERVK26-int LTR ERVK -3385 3534 3269 4 1747 318 347 15 31 chrX 152333627 152333823 -14316473 - MERVK26-int LTR ERVK -3749 3170 2978 4 1747 362 314 29 14 chrX 152333866 152334073 -14316223 - MERVK26-int LTR ERVK -3644 2898 2689 4 1747 649 326 101 30 chrX 152334270 152334706 -14315590 - MERVK26-int LTR ERVK -4411 2508 2042 4 1747 309 343 50 0 chrX 152335742 152335841 -14314455 + LTR80A LTR ERVL 181 284 -299 4 1747 432 354 59 32 chrX 152335891 152336078 -14314218 + LTR80A LTR ERVL 392 583 0 4 1747 203 297 94 47 chrX 152337100 152337206 -14313090 - MIRc SINE MIR -42 226 116 4 1747 24 0 0 0 chrX 152338083 152338107 -14312189 + AT_rich Low_complexity Low_complexity 1 24 0 4 1747 194 83 56 0 chrX 152338935 152338971 -14311325 + (CATA)n Simple_repeat Simple_repeat 1 38 0 4 1747 532 247 128 5 chrX 152338983 152339096 -14311200 - L1MA4 LINE L1 -393 5907 5776 4 1747 441 0 0 0 chrX 152339096 152339145 -14311151 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1747 532 275 192 14 chrX 152339145 152339494 -14310802 - L1MA4 LINE L1 -525 5775 5328 4 1747 230 333 0 0 chrX 152339469 152339565 -14310731 - L1MA4 LINE L1 -782 5398 5303 4 1747 228 259 92 9 chrX 152339831 152339890 -14310406 - L1MA4 LINE L1 -1097 5043 4976 4 1747 408 55 0 0 chrX 152339890 152339945 -14310351 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1747 228 259 92 9 chrX 152339945 152339994 -14310302 - L1MA4 LINE L1 -1165 4975 4927 4 1747 365 274 233 50 chrX 152340004 152340223 -14310073 + MTD LTR MaLR 18 276 -143 4 1747 1348 285 127 11 chrX 152340313 152340579 -14309717 - L1MA4 LINE L1 -1209 4934 4624 4 1747 180 0 0 0 chrX 152340579 152340599 -14309697 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 4 1747 1348 285 127 11 chrX 152340599 152341034 -14309262 - L1MA4 LINE L1 -1520 4623 4152 4 1747 379 301 56 53 chrX 152341014 152341354 -14308942 - L1MA4 LINE L1 -2995 3148 2808 4 1747 1179 167 79 4 chrX 152341359 152341587 -14308709 - Lx LINE L1 0 6654 6410 4 1747 299 281 15 58 chrX 152343455 152343628 -14306668 - Lx8 LINE L1 -1553 5920 5720 4 1747 227 175 171 24 chrX 152343643 152343725 -14306571 - Lx8 LINE L1 0 7473 7380 4 1747 233 330 23 0 chrX 152343757 152343845 -14306451 - RMER1C Other Other -146 1196 1107 4 1747 712 343 17 8 chrX 152343781 152344051 -14306245 - Lx8 LINE L1 -191 7282 6999 4 1747 950 337 40 29 chrX 152344266 152344712 -14305584 - Lx7 LINE L1 -462 7234 6784 4 1747 362 209 0 75 chrX 152344721 152344814 -14305482 - L1M2 LINE L1 -539 5761 5676 4 1747 810 120 0 0 chrX 152345124 152345249 -14305047 + (TTTC)n Simple_repeat Simple_repeat 2 126 0 4 1747 24 53 0 0 chrX 152346279 152346317 -14303979 + AT_rich Low_complexity Low_complexity 1 38 0 4 1747 529 170 11 0 chrX 152346407 152346501 -14303795 - MTD LTR MaLR -60 359 265 4 1747 982 304 19 49 chrX 152346526 152346893 -14303403 - Lx6 LINE L1 0 7460 7105 4 1747 553 262 28 7 chrX 152347021 152347163 -14303133 + B1_Mur1 SINE Alu 1 145 -4 4 1747 21 0 0 0 chrX 152348537 152348558 -14301738 + AT_rich Low_complexity Low_complexity 1 21 0 4 1747 16024 102 3 4 chrX 152348819 152351468 -14298828 + L1_Mus1 LINE L1 3521 6166 -401 4 1747 1384 99 5 19 chrX 152351469 152351700 -14298596 + L1_Mus1 LINE L1 6360 6567 0 4 1747 458 97 14 0 chrX 152351702 152351823 -14298473 + L1_Mus1 LINE L1 6490 6567 0 4 1747 386 301 52 77 chrX 152351972 152352127 -14298169 - MER5A DNA MER1_type -38 151 1 4 1747 314 286 0 0 chrX 152352751 152352821 -14297475 - ORR1C2 LTR MaLR -55 329 260 5 1747 1378 213 47 101 chrX 152353161 152353548 -14296748 + ORR1D1 LTR MaLR 9 374 0 5 1747 22 0 0 0 chrX 152353949 152353971 -14296325 + AT_rich Low_complexity Low_complexity 1 22 0 5 1747 346 227 25 51 chrX 152354655 152354734 -14295562 + RSINE1 SINE B4 82 158 -7 5 1747 1664 157 27 45 chrX 152355948 152356281 -14294015 + ORR1A4 LTR MaLR 3 329 0 5 1747 3670 129 102 47 chrX 152356281 152356507 -14293789 + ORR1A4-int LTR MaLR 1 205 -1758 5 1747 2903 122 4 13 chrX 152356507 152356965 -14293331 - Lx LINE L1 -5 6649 6196 5 1747 3670 129 102 47 chrX 152356965 152357443 -14292853 + ORR1A4-int LTR MaLR 206 744 -1219 5 1747 455 261 128 43 chrX 152357370 152357534 -14292762 + MT2B LTR ERVL 94 271 -330 5 1747 5246 151 17 94 chrX 152358369 152359695 -14290601 + ORR1A4-int LTR MaLR 96 1963 0 5 1747 1623 163 4 14 chrX 152359695 152359975 -14290321 + ORR1A4 LTR MaLR 1 277 -52 5 1747 742 204 76 56 chrX 152359975 152360030 -14290266 - ORR1B1-int LTR MaLR -118 1391 1343 5 1747 1307 25 0 0 chrX 152360030 152360191 -14290105 + L1Md_F2 LINE L1 6410 6570 -12 5 1747 742 204 76 56 chrX 152360191 152360332 -14289964 - ORR1B1-int LTR MaLR -167 1342 1191 5 1747 459 0 0 0 chrX 152361133 152361184 -14289112 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 5 1747 234 282 46 23 chrX 152361839 152361926 -14288370 - L2a LINE L2 -63 3363 3275 5 1747 351 0 0 0 chrX 152363020 152363059 -14287237 + (TTTTA)n Simple_repeat Simple_repeat 5 43 0 5 1747 3557 118 16 9 chrX 152363658 152364214 -14286082 + Lx LINE L1 6088 6647 -7 5 1747 34374 65 3 6 chrX 152364364 152366769 -14283527 - L1Md_F2 LINE L1 -4 6578 4198 5 1747 432 0 0 0 chrX 152366769 152366817 -14283479 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 1747 34374 85 7 15 chrX 152366817 152370403 -14279893 - L1Md_F2 LINE L1 -1686 4197 629 5 1747 6087 77 29 5 chrX 152371657 152372489 -14277807 - L1_Mus2 LINE L1 -1 6565 5714 5 1747 4526 94 0 11 chrX 152372493 152372512 -14277784 + L1_Mm LINE L1 3457 3475 -2408 5 1747 3212 41 8 5 chrX 152372512 152372907 -14277389 + MTA_Mm LTR MaLR 1 396 0 5 1747 4526 94 0 11 chrX 152372907 152373554 -14276742 + L1_Mm LINE L1 3476 4116 -1767 5 1747 234 291 24 79 chrX 152373564 152373691 -14276605 - RMER12 LTR ERVK -463 859 740 5 1747 212 191 45 45 chrX 152374273 152374416 -14275880 + (TATATG)n Simple_repeat Simple_repeat 1 143 0 5 1747 273 164 0 0 chrX 152376801 152376874 -14273422 + A-rich Low_complexity Low_complexity 1 73 0 5 1747 194 62 31 0 chrX 152377018 152377050 -14273246 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 1747 404 0 0 38 chrX 152378020 152378073 -14272223 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 5 1747 2692 114 5 26 chrX 152379340 152379756 -14270540 - RLTR9E LTR ERVK 0 409 3 5 1747 418 335 31 25 chrX 152379786 152379945 -14270351 - LTR33 LTR ERVL -63 452 293 5 1747 2919 261 21 3 chrX 152380244 152381034 -14269262 - Lx2B LINE L1 -1 7007 6168 5 1747 4515 161 28 11 chrX 152381037 152381859 -14268437 + L1_Mur2 LINE L1 4847 5682 -195 5 1747 265 320 53 13 chrX 152381960 152382030 -14268266 + B4A SINE B4 6 78 -214 5 1747 1589 116 177 0 chrX 152382030 152382307 -14267989 + RMER6C LTR ERVK 1 326 -364 5 1747 186 208 0 0 chrX 152382471 152382524 -14267772 + (TATG)n Simple_repeat Simple_repeat 4 56 0 5 1747 911 126 6 11 chrX 152383095 152383271 -14267025 + L1_Mus4 LINE L1 6461 6635 -1 5 1747 339 302 138 21 chrX 152383364 152383655 -14266641 + L1M5 LINE L1 2861 3185 -2961 5 1747 22 0 0 0 chrX 152383877 152383899 -14266397 + AT_rich Low_complexity Low_complexity 1 22 0 5 1747 7481 39 2 9 chrX 152384061 152384975 -14265321 + L1Md_F2 LINE L1 5667 6574 -8 5 1747 226 32 0 88 chrX 152384994 152385028 -14265268 - L1Md_T LINE L1 -911 4972 4942 5 1747 5347 28 2 0 chrX 152384999 152385636 -14264660 + L1Md_T LINE L1 4949 5586 -297 5 1747 8402 33 0 0 chrX 152385636 152386631 -14263665 + L1Md_T LINE L1 5587 6581 -1 5 1747 248 313 80 15 chrX 152386794 152386995 -14263301 + L1M5 LINE L1 4081 4294 -1852 5 1747 260 261 76 0 chrX 152387175 152387267 -14263029 - L1MA5 LINE L1 -27 6273 6175 5 1747 486 0 0 0 chrX 152387269 152387323 -14262973 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 1747 1762 236 115 28 chrX 152387405 152387541 -14262755 - Lx7 LINE L1 -3 7693 7551 5 1747 717 73 0 0 chrX 152387541 152387637 -14262659 + (GA)n Simple_repeat Simple_repeat 1 96 0 5 1747 1762 236 115 28 chrX 152387637 152388076 -14262220 - Lx7 LINE L1 -146 7550 7068 5 1747 908 53 0 0 chrX 152388130 152388243 -14262053 + B1_Mus2 SINE Alu 26 138 -9 5 1747 231 61 0 0 chrX 152388243 152388276 -14262020 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 1747 2362 80 18 9 chrX 152388277 152388604 -14261692 - L1_Mus3 LINE L1 -36 6602 6273 5 1747 14222 196 53 71 chrX 152388600 152392637 -14257659 - L1_Mur3 LINE L1 -552 5328 1365 5 1747 1033 251 52 62 chrX 152392637 152392760 -14257536 - L1_Mur3 LINE L1 -6490 1238 1125 5 1747 2745 123 59 37 chrX 152392760 152393251 -14257045 - Lx2B LINE L1 -2 6998 6497 5 1747 1033 251 52 62 chrX 152393251 152393527 -14256769 - L1_Mur3 LINE L1 -6604 1124 843 5 1747 418 283 26 0 chrX 152393854 152393967 -14256329 - L1_Mur3 LINE L1 -6903 825 710 5 1747 692 191 50 29 chrX 152394410 152394550 -14255746 - Lx4A LINE L1 -183 6875 6733 5 1747 4001 102 3 11 chrX 152394550 152394593 -14255703 - MT2B2 LTR ERVL 0 584 547 5 1747 2950 85 20 2 chrX 152394593 152394993 -14255303 + MTB_Mm LTR MaLR 1 407 0 5 1747 4001 102 3 11 chrX 152394993 152395522 -14254774 - MT2B2 LTR ERVL -38 546 16 5 1747 5057 179 30 20 chrX 152395527 152396476 -14253820 - Lx4A LINE L1 -321 6737 5828 5 1747 1452 88 0 131 chrX 152396476 152396751 -14253545 - L1Md_F2 LINE L1 0 6582 6344 5 1747 16797 194 54 186 chrX 152396751 152397032 -14253264 - Lx4A LINE L1 -1169 5828 5680 5 1747 2941 124 7 4 chrX 152397032 152397495 -14252801 + L1_Mus4 LINE L1 6173 6636 0 5 1747 16797 132 72 199 chrX 152397495 152397967 -14252329 - Lx4A LINE L1 -198 5679 5197 5 1747 1392 42 10 10 chrX 152397967 152398159 -14252137 - MTB LTR MaLR 0 400 209 5 1747 933 135 36 15 chrX 152398152 152398327 -14251969 + MTA_Mm LTR MaLR 181 396 0 5 1747 681 54 21 0 chrX 152398327 152398420 -14251876 + MTA_Mm-int LTR MaLR 1 95 -1003 5 1747 1071 56 7 7 chrX 152398415 152398559 -14251737 + MTA_Mm LTR MaLR 253 396 0 5 1747 16797 132 72 199 chrX 152398559 152400903 -14249393 - Lx4A LINE L1 -198 5196 2796 5 1747 249 57 0 0 chrX 152400903 152400938 -14249358 + (TTG)n Simple_repeat Simple_repeat 1 35 0 5 1747 16797 132 72 199 chrX 152400938 152401634 -14248662 - L1_Mur2 LINE L1 -3082 2795 2062 5 1747 330 26 0 0 chrX 152401634 152401673 -14248623 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1747 16797 147 50 122 chrX 152401673 152402298 -14247998 - L1_Mur2 LINE L1 -3816 2061 1438 5 1747 565 291 6 18 chrX 152402298 152402466 -14247830 - RLTR17 LTR ERVK -323 369 204 5 1747 16797 147 50 122 chrX 152402466 152403418 -14246878 - L1_Mur2 LINE L1 -3816 1437 485 5 1747 1103 95 0 0 chrX 152403860 152404008 -14246288 + B1_Mus1 SINE Alu 1 148 0 5 1747 6977 172 3 43 chrX 152404021 152404754 -14245542 - L1_Mur1 LINE L1 -90 5796 5108 5 1747 1099 103 0 0 chrX 152404754 152404900 -14245396 - B1_Mus2 SINE Alu 0 147 2 5 1747 6977 172 3 43 chrX 152404900 152405523 -14244773 - L1_Mur1 LINE L1 -779 5107 4494 5 1747 5545 77 28 1 chrX 152405523 152406273 -14244023 + L1_Mus1 LINE L1 5798 6567 0 5 1747 990 109 0 0 chrX 152406425 152406572 -14243724 + L1_Mus2 LINE L1 6419 6565 -1 5 1747 245 250 0 0 chrX 152406682 152406734 -14243562 + CT-rich Low_complexity Low_complexity 3 54 0 5 1747 240 111 0 0 chrX 152407380 152407416 -14242880 + (A)n Simple_repeat Simple_repeat 1 36 0 5 1747 859 217 0 0 chrX 152408699 152408879 -14241417 + Lx9 LINE L1 7235 7414 -230 5 1747 1499 127 63 0 chrX 152408877 152409129 -14241167 + MusHAL1 LINE L1 1455 1722 -990 5 1747 262 296 89 6 chrX 152409724 152409904 -14240392 - L1MC LINE L1 -1841 4305 4111 5 1747 6414 171 6 22 chrX 152410357 152411549 -14238747 - Lx2B LINE L1 -1 6999 5827 5 1747 3924 53 6 0 chrX 152411576 152412067 -14238229 - L1Md_F2 LINE L1 0 6582 6089 5 1747 832 184 0 0 chrX 152412067 152412219 -14238077 - Lx2A1 LINE L1 -1184 5824 5673 5 1747 6941 190 12 10 chrX 152412210 152413611 -14236685 - Lx2A1 LINE L1 -354 5523 4120 5 1747 27309 141 26 14 chrX 152413608 152419707 -14230589 - L1_Mus3 LINE L1 -7 6631 442 5 1747 5324 183 49 13 chrX 152419708 152420817 -14229479 - Lx2A1 LINE L1 -1751 4126 2978 5 1747 4082 164 28 66 chrX 152420821 152422295 -14228001 - L1VL4 LINE L1 -1989 1570 193 5 1747 26 0 0 0 chrX 152422419 152422445 -14227851 + AT_rich Low_complexity Low_complexity 1 26 0 5 1747 749 158 17 6 chrX 152422543 152422721 -14227575 + CT-rich Low_complexity Low_complexity 1 180 0 5 1747 1759 212 12 15 chrX 152422758 152423139 -14227157 - ORR1B2 LTR MaLR -8 386 1 5 1747 4525 242 79 72 chrX 152423235 152423753 -14226543 - L1_Rod LINE L1 -146 5701 5164 5 1747 393 58 0 0 chrX 152423753 152423805 -14226491 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1747 4525 242 79 72 chrX 152423805 152424711 -14225585 - L1_Rod LINE L1 -684 5163 4313 5 1747 279 0 0 0 chrX 152424711 152424742 -14225554 + (TC)n Simple_repeat Simple_repeat 2 32 0 5 1747 4525 242 79 72 chrX 152424742 152424837 -14225459 - L1_Rod LINE L1 -1535 4312 4169 5 1747 372 43 0 0 chrX 152424837 152424883 -14225413 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1747 4525 242 79 72 chrX 152424883 152425251 -14225045 - L1_Rod LINE L1 -1679 4168 3798 5 1747 906 75 0 0 chrX 152425275 152425395 -14224901 + MTB LTR MaLR 1 120 -287 5 1747 4395 14 2 0 chrX 152425395 152425887 -14224409 + MT2_Mm LTR ERVL 1 493 0 5 1747 40528 16 14 0 chrX 152425887 152431174 -14219122 + MERVL-int LTR ERVL 1 5360 -125 5 1747 392 167 46 35 chrX 152431174 152431261 -14219035 + ORR1A3-int LTR MaLR 553 640 -1323 5 1747 314 0 0 0 chrX 152431261 152431299 -14218997 + MERVL-int LTR ERVL 5448 5485 0 5 1747 4395 14 2 0 chrX 152431299 152431791 -14218505 + MT2_Mm LTR ERVL 1 493 0 5 1747 1903 88 0 21 chrX 152431791 152432082 -14218214 + MTB LTR MaLR 116 400 0 5 1747 1569 249 24 57 chrX 152432086 152432721 -14217575 - L1_Rod LINE L1 -2093 3754 3141 5 1747 1510 137 60 108 chrX 152432733 152432796 -14217500 + RLTR25B LTR ERVK 236 302 -726 5 1747 2576 31 16 12 chrX 152432796 152433119 -14217177 + L1Md_F3 LINE L1 6260 6583 -1 5 1747 1510 137 60 108 chrX 152433119 152433390 -14216906 + RLTR25B LTR ERVK 303 554 -474 5 1747 385 106 0 0 chrX 152433390 152433456 -14216840 + L1_Mus1 LINE L1 6461 6526 -41 5 1747 7072 96 14 1 chrX 152433453 152434523 -14215773 + L1_Mus1 LINE L1 5483 6565 -2 5 1747 5954 110 21 0 chrX 152434537 152435447 -14214849 + MusHAL1 LINE L1 861 1789 -923 5 1747 3328 154 44 61 chrX 152435449 152436252 -14214044 - RMER17D2 LTR ERVK -2 807 19 5 218 7646 172 11 7 chrX 152436252 152437752 -14212544 + L1_Mur2 LINE L1 2986 4492 -1385 5 1748 27200 120 19 6 chrX 152437752 152442768 -14207528 - L1Md_F LINE L1 -416 5467 381 5 1748 2327 122 22 26 chrX 152442776 152443232 -14207064 - MusHAL1 LINE L1 -1838 2079 1626 5 1748 864 49 9 4 chrX 152443233 152443371 -14206925 - MusHAL1 LINE L1 -2621 1297 1175 5 1748 509 225 0 0 chrX 152443362 152443451 -14206845 - L1VL4 LINE L1 -6079 223 135 5 1748 3895 161 29 0 chrX 152443508 152444167 -14206129 - L1VL4 LINE L1 -5490 812 135 5 1748 3744 152 44 25 chrX 152444265 152444975 -14205321 - RLTR22_Mur LTR ERVK -1125 723 1 5 1748 781 300 20 0 chrX 152444981 152445234 -14205062 + Lx8 LINE L1 6285 6542 -931 5 1748 1037 271 131 24 chrX 152445291 152445665 -14204631 + MTD LTR MaLR 1 414 -5 5 1748 1844 278 68 49 chrX 152445714 152446494 -14203802 + Lx8 LINE L1 6647 7441 -32 5 1748 366 23 0 0 chrX 152446494 152446537 -14203759 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 1748 180 111 0 0 chrX 152446841 152446868 -14203428 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1748 3787 87 4 8 chrX 152446907 152447418 -14202878 - L1_Mus1 LINE L1 0 6567 6059 5 1748 198 295 201 35 chrX 152447477 152447621 -14202675 - L2 LINE L2 -1078 2341 2174 5 1748 1315 326 17 6 chrX 152447631 152448100 -14202196 + Lx5 LINE L1 6551 7024 -26 6 1748 769 59 0 0 chrX 152448427 152448528 -14201768 - L1Md_F2 LINE L1 -564 6018 5918 6 1748 4123 79 0 9 chrX 152448528 152449088 -14201208 + L1Md_F2 LINE L1 6027 6581 -1 6 1748 355 302 43 0 chrX 152449092 152449208 -14201088 + B4A SINE B4 162 282 -10 6 1748 33301 75 7 1 chrX 152449704 152455968 -14194328 - L1Md_F2 LINE L1 -9 6573 271 6 1748 22 0 0 0 chrX 152456368 152456390 -14193906 + AT_rich Low_complexity Low_complexity 1 22 0 6 1748 33 25 0 0 chrX 152457212 152457252 -14193044 + AT_rich Low_complexity Low_complexity 1 40 0 6 1748 402 279 60 28 chrX 152457427 152457557 -14192739 - B1F1 SINE Alu -13 136 6 6 1748 180 0 0 0 chrX 152458116 152458136 -14192160 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 6 1748 355 267 101 37 chrX 152458341 152458450 -14191846 + B1F2 SINE Alu 34 149 0 6 1748 255 347 55 47 chrX 152458450 152458468 -14191828 + B4A SINE B4 119 246 -46 6 1748 1763 173 64 6 chrX 152458809 152459135 -14191161 + RLTR17 LTR ERVK 1 345 -347 6 1748 2429 209 10 2 chrX 152459135 152459658 -14190638 - L1_Mm LINE L1 -460 5423 4897 6 1748 6543 138 9 3 chrX 152459657 152460845 -14189451 + Lx LINE L1 5459 6654 0 6 1748 180 182 0 0 chrX 152461090 152461134 -14189162 + A-rich Low_complexity Low_complexity 1 44 0 6 1748 214 400 0 0 chrX 152461160 152461225 -14189071 + ID SINE ID 18 82 -142 6 1748 388 338 121 32 chrX 152461565 152461813 -14188483 + L1M5 LINE L1 5255 5524 -640 6 1748 304 315 61 15 chrX 152462145 152462277 -14188019 + B1F1 SINE Alu 5 142 -7 6 1748 192 77 0 0 chrX 152462282 152462308 -14187988 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 6 1748 271 342 18 0 chrX 152462370 152462481 -14187815 - Lx7 LINE L1 -377 7319 7207 6 1748 4034 264 63 42 chrX 152462542 152463897 -14186399 - Lx6 LINE L1 -169 7291 5908 6 1748 1095 108 0 0 chrX 152464136 152464284 -14186012 + B1_Mus1 SINE Alu 1 148 0 6 1748 530 29 15 0 chrX 152464284 152464352 -14185944 + (GAAA)n Simple_repeat Simple_repeat 3 71 0 6 1748 344 262 13 121 chrX 152464512 152464783 -14185513 + L1VL1 LINE L1 45 382 -6040 6 1748 364 258 45 8 chrX 152464950 152465083 -14185213 + L1_Mus1 LINE L1 664 801 -5815 6 1748 2780 157 20 31 chrX 152465093 152466150 -14184146 + L1_Mus1 LINE L1 725 1697 -4186 6 1748 10230 59 1 1 chrX 152466150 152468246 -14182050 - L1Md_F2 LINE L1 -3 6579 4483 6 1748 20868 110 8 1 chrX 152468251 152471818 -14178478 + L1_Mus1 LINE L1 2539 6131 -436 6 1748 787 66 8 0 chrX 152471820 152471942 -14178354 - L1Md_F2 LINE L1 -12 6570 6448 6 1748 3111 89 2 15 chrX 152471942 152472399 -14177897 + L1_Mus1 LINE L1 6116 6566 -1 6 1748 1007 206 76 0 chrX 152472383 152472646 -14177650 + L1_Mur2 LINE L1 5354 5613 -264 6 1748 659 88 10 0 chrX 152472647 152472749 -14177547 + L1_Mus2 LINE L1 6461 6563 -3 6 1748 6879 130 36 10 chrX 152472775 152473706 -14176590 - L1_Mur1 LINE L1 -1768 4118 3162 6 1748 1143 61 0 0 chrX 152473706 152473854 -14176442 + (TTTC)n Simple_repeat Simple_repeat 2 149 0 6 1748 6879 130 36 10 chrX 152473854 152474211 -14176085 - L1_Mur1 LINE L1 -2725 3161 2797 6 1748 4789 106 17 4 chrX 152474216 152474939 -14175357 + Lx3B LINE L1 5054 5785 -101 6 1748 6645 124 11 26 chrX 152474939 152476018 -14174278 + Lx3B LINE L1 5908 6970 -3 6 1748 803 136 8 0 chrX 152476183 152476315 -14173981 + Lx3B LINE L1 6182 6314 -659 6 1748 24 0 0 0 chrX 152476456 152476480 -14173816 + AT_rich Low_complexity Low_complexity 1 24 0 6 1748 687 277 11 37 chrX 152477202 152477393 -14172903 + B3 SINE B2 1 186 -30 6 1748 255 103 0 0 chrX 152477395 152477434 -14172862 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1748 1760 137 7 0 chrX 152477618 152477895 -14172401 + Lx2 LINE L1 6719 6997 0 6 1748 206 309 131 7 chrX 152477915 152478068 -14172228 - L2a LINE L2 0 3426 3255 6 1748 21 0 0 0 chrX 152478234 152478255 -14172041 + AT_rich Low_complexity Low_complexity 1 21 0 6 1748 4369 234 72 36 chrX 152478945 152480576 -14169720 - Lx5 LINE L1 -4 7046 5334 6 1748 4209 67 0 13 chrX 152480576 152481119 -14169177 - L1_Mus1 LINE L1 -1 6566 6031 6 1748 4369 199 102 2 chrX 152481119 152481758 -14168538 - Lx5 LINE L1 -544 5333 4650 6 1748 271 277 153 21 chrX 152482024 152482168 -14168128 - RLTR15 LTR ERVK -196 163 1 6 1748 1178 166 12 30 chrX 152482168 152482442 -14167854 - Lx5 LINE L1 -1220 4657 4414 6 1748 387 0 0 0 chrX 152482451 152482494 -14167802 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 6 1748 1191 68 0 0 chrX 152482494 152482641 -14167655 - B1_Mm SINE Alu 0 147 1 6 1748 3864 127 14 0 chrX 152482643 152483216 -14167080 - L1_Mus4 LINE L1 -17 6619 6039 6 1748 10070 160 22 11 chrX 152483216 152485272 -14165024 + Lx2B LINE L1 3975 6066 -934 6 1748 377 70 18 0 chrX 152485394 152485451 -14164845 + (TAAA)n Simple_repeat Simple_repeat 3 60 0 6 1748 8809 185 33 13 chrX 152485519 152486118 -14164178 - Lx5 LINE L1 -2563 3314 2701 6 1748 2587 106 33 5 chrX 152486118 152486507 -14163789 + MTB LTR MaLR 1 400 0 6 1748 8809 185 33 13 chrX 152486507 152487153 -14163143 - Lx5 LINE L1 -3177 2700 2058 6 1748 204 40 0 0 chrX 152487153 152487178 -14163118 + (TGG)n Simple_repeat Simple_repeat 1 25 0 6 1748 8809 185 33 13 chrX 152487178 152487196 -14163100 - Lx5 LINE L1 -3820 2057 2037 6 1748 183 80 0 0 chrX 152487196 152487221 -14163075 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 1748 8809 199 30 10 chrX 152487221 152488239 -14162057 - Lx5 LINE L1 -3841 2036 984 6 1748 18292 77 80 1 chrX 152488710 152491447 -14158849 - L1_Mm LINE L1 -325 5558 2604 6 1748 411 212 0 12 chrX 152491425 152491511 -14158785 + Lx4A LINE L1 6755 6839 -219 6 1748 1251 221 57 0 chrX 152491503 152491838 -14158458 - Lx9 LINE L1 -439 7205 6852 6 1748 6695 45 2 2 chrX 152491838 152492663 -14157633 + L1Md_F2 LINE L1 5756 6580 -2 6 1748 822 234 46 55 chrX 152493513 152493730 -14156566 - B3 SINE B2 0 216 2 6 1748 397 329 45 39 chrX 152493819 152493974 -14156322 - B3 SINE B2 -29 187 32 6 1748 2457 78 6 0 chrX 152494332 152494666 -14155630 + MTB LTR MaLR 1 336 -64 6 1748 2409 105 8 24 chrX 152494666 152495045 -14155251 - MTA_Mm-int LTR MaLR -725 373 1 6 1748 678 142 143 39 chrX 152495045 152495199 -14155097 - MTA_Mm LTR MaLR 0 396 227 6 1748 2838 144 72 26 chrX 152495167 152495792 -14154504 + MTB-int LTR MaLR 527 1258 0 6 1748 2709 87 52 3 chrX 152495792 152496173 -14154123 + MTB LTR MaLR 1 400 0 6 1748 702 108 0 47 chrX 152496505 152496612 -14153684 + RMER6C LTR ERVK 1 102 -588 6 1748 1361 203 163 8 chrX 152496593 152496662 -14153634 + RMER6C LTR ERVK 266 351 -339 6 1748 306 0 0 0 chrX 152496662 152496696 -14153600 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1748 576 29 0 0 chrX 152496696 152496765 -14153531 + (GA)n Simple_repeat Simple_repeat 2 71 0 6 1748 1361 203 163 8 chrX 152496765 152497062 -14153234 + RMER6C LTR ERVK 352 688 -2 6 1748 6852 27 3 0 chrX 152498554 152500000 -14150296 + L1Md_Gf LINE L1 1 830 -5692 6 1748 35354 39 0 0 chrX 152500000 152504662 -14145634 + L1Md_T LINE L1 831 5589 -297 1 1748 8900 8 0 0 chrX 152504662 152505701 -14144595 + L1Md_T LINE L1 5590 6585 0 1 1748 700 195 181 49 chrX 152505701 152505906 -14144390 + RMER4B LTR ERVK 33 264 -321 2 1748 25 31 0 0 chrX 152506291 152506323 -14143973 + AT_rich Low_complexity Low_complexity 1 32 0 3 1748 633 90 0 0 chrX 152506333 152506422 -14143874 + (TA)n Simple_repeat Simple_repeat 2 90 0 4 1748 23595 141 13 20 chrX 152506960 152508762 -14141534 - L1_Mus4 LINE L1 0 6636 4856 5 1748 198 0 0 0 chrX 152508762 152508784 -14141512 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 6 1748 23595 170 21 11 chrX 152508784 152512888 -14137408 - L1_Mus4 LINE L1 -1028 4855 689 5 1748 194 299 0 41 chrX 152512997 152513081 -14137215 - MIRc SINE MIR -34 234 149 7 1748 1798 199 19 11 chrX 152513174 152513549 -14136747 + ORR1C1 LTR MaLR 1 378 0 8 1748 390 21 0 0 chrX 152514186 152514233 -14136063 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 9 1748 259 167 27 40 chrX 152514484 152514559 -14135737 + A-rich Low_complexity Low_complexity 2 75 0 1 1748 5094 165 18 7 chrX 152515067 152516047 -14134249 - Lx2B LINE L1 -1029 5971 4965 1 1748 4209 206 87 11 chrX 152516046 152517002 -14133294 + Lx2B LINE L1 5967 6994 -6 1 1748 262 198 226 36 chrX 152517030 152517114 -14133182 - ORR1E LTR MaLR -259 100 1 1 1748 314 98 28 56 chrX 152517211 152517319 -14132977 + T-rich Low_complexity Low_complexity 2 106 0 1 1748 555 352 80 27 chrX 152517456 152517832 -14132464 + MLT1D LTR MaLR 110 505 0 1 1748 465 344 0 56 chrX 152518164 152518324 -14131972 + MER58A DNA MER1_type 13 163 -61 1 1748 1163 69 0 0 chrX 152518655 152518800 -14131496 - B1_Mus2 SINE Alu 0 147 3 1 1748 1220 280 47 80 chrX 152518808 152519704 -14130592 - L1MCa LINE L1 -1589 4732 3867 1 1748 487 159 47 0 chrX 152519706 152519813 -14130483 - Lx9 LINE L1 -8 7636 7525 1 1748 306 0 0 0 chrX 152519828 152519862 -14130434 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 1748 325 275 0 0 chrX 152519862 152519931 -14130365 + Lx9 LINE L1 7213 7281 -363 2 1748 21 0 0 0 chrX 152519992 152520013 -14130283 + AT_rich Low_complexity Low_complexity 1 21 0 2 1748 673 273 165 26 chrX 152520047 152520423 -14129873 - L1MCa LINE L1 -4078 2430 1999 1 1748 1039 114 0 12 chrX 152520423 152520591 -14129705 - L1Md_F2 LINE L1 -5 6577 6412 2 1748 673 273 165 26 chrX 152520591 152520869 -14129427 - L1MCa LINE L1 -4510 1998 1686 1 1748 269 165 129 86 chrX 152521204 152521297 -14128999 + L1MB1 LINE L1 6067 6163 -26 2 1748 470 31 0 15 chrX 152521308 152521373 -14128923 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 1748 361 150 35 81 chrX 152521377 152521464 -14128832 + B1_Mm SINE Alu 65 147 0 2 1748 241 237 47 85 chrX 152521472 152521601 -14128695 + L1MA10 LINE L1 6169 6292 -42 2 1748 1682 160 44 17 chrX 152522265 152522589 -14127707 + Lx2 LINE L1 6274 6917 -80 2 1748 275 301 35 24 chrX 152522789 152522959 -14127337 + L1MC3 LINE L1 6880 7051 -734 2 1748 666 96 0 0 chrX 152523789 152523893 -14126403 + (GA)n Simple_repeat Simple_repeat 2 105 0 2 1748 612 83 0 0 chrX 152525267 152525351 -14124945 - BC1_Mm scRNA scRNA -68 84 1 3 1748 732 257 32 0 chrX 152525351 152525538 -14124758 + L3 LINE CR1 3547 3739 -750 3 1748 691 146 19 12 chrX 152525785 152525945 -14124351 + (TA)n Simple_repeat Simple_repeat 1 161 0 3 1748 419 35 18 0 chrX 152526547 152526604 -14123692 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 1748 2992 106 24 2 chrX 152526736 152527190 -14123106 - Lx LINE L1 -1 6653 6190 3 1748 21 0 0 0 chrX 152527532 152527553 -14122743 + AT_rich Low_complexity Low_complexity 1 21 0 3 1748 23 33 0 0 chrX 152528440 152528470 -14121826 + AT_rich Low_complexity Low_complexity 1 30 0 3 1748 431 119 0 0 chrX 152528784 152528851 -14121445 + L1_Rod LINE L1 5755 5821 -26 3 1748 4162 223 70 50 chrX 152528846 152530077 -14120219 + Lx9 LINE L1 6381 7635 -9 3 1748 462 317 91 54 chrX 152530511 152530808 -14119488 - Lx8 LINE L1 -15 7458 7151 3 1748 5432 83 11 0 chrX 152530896 152531634 -14118662 + L1_Mus3 LINE L1 5886 6631 -7 4 1748 825 169 20 80 chrX 152532567 152532766 -14117530 + ORR1C2 LTR MaLR 1 187 -197 4 1748 542 94 0 23 chrX 152532766 152532853 -14117443 + (TCTCCC)n Simple_repeat Simple_repeat 5 89 0 4 1748 233 210 48 16 chrX 152532853 152532916 -14117380 + ORR1C2 LTR MaLR 166 230 -144 4 1748 22 0 0 0 chrX 152533200 152533222 -14117074 + AT_rich Low_complexity Low_complexity 1 22 0 4 1748 26 0 0 0 chrX 152534472 152534498 -14115798 + AT_rich Low_complexity Low_complexity 1 26 0 4 1748 432 37 0 0 chrX 152534844 152534898 -14115398 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1748 1821 175 47 0 chrX 152535046 152535389 -14114907 - RLTR15 LTR ERVK 0 359 1 4 1748 200 118 29 0 chrX 152535407 152535441 -14114855 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 4 1748 222 273 11 22 chrX 152535699 152535789 -14114507 + A-rich Low_complexity Low_complexity 3 91 0 4 1748 456 364 74 24 chrX 152535957 152536255 -14114041 - Lx8 LINE L1 -197 7276 6964 4 1748 3708 205 72 11 chrX 152536726 152537339 -14112957 + Lx7 LINE L1 4928 5573 -307 5 1748 2905 35 76 0 chrX 152537339 152537707 -14112589 + MTA_Mm LTR MaLR 1 396 0 5 1748 6887 233 82 29 chrX 152537707 152539724 -14110572 + Lx7 LINE L1 5574 7696 0 5 1748 336 155 0 33 chrX 152539766 152539826 -14110470 + PB1D9 SINE Alu 2 59 -61 5 1748 234 0 0 158 chrX 152539827 152539941 -14110355 + (CAGAG)n Simple_repeat Simple_repeat 5 100 0 5 1748 436 244 0 0 chrX 152539944 152540057 -14110239 + B1_Mur1 SINE Alu 42 144 -5 5 1748 480 18 0 0 chrX 152541153 152541210 -14109086 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1748 799 158 26 7 chrX 152541221 152541374 -14108922 + Lx LINE L1 6487 6642 -12 5 1748 321 26 0 0 chrX 152541380 152541418 -14108878 + (CAA)n Simple_repeat Simple_repeat 2 39 0 5 1748 670 231 165 17 chrX 152541457 152541633 -14108663 + B3 SINE B2 7 208 -8 5 1748 1204 242 29 32 chrX 152541639 152542099 -14108197 - Lx4B LINE L1 -17 6983 6520 5 1748 609 270 57 6 chrX 152543073 152543248 -14107048 + L1MD2 LINE L1 38 221 -6326 6 1748 258 56 0 0 chrX 152543609 152543645 -14106651 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 6 1748 8812 152 12 13 chrX 152543713 152545256 -14105040 + Lx4A LINE L1 5508 7055 -3 6 1748 678 11 33 0 chrX 152545276 152545367 -14104929 + (TAGA)n Simple_repeat Simple_repeat 4 97 0 6 1748 491 293 125 45 chrX 152545974 152546479 -14103817 + L1MD2 LINE L1 5271 5715 -829 6 1748 5885 225 49 14 chrX 152546512 152547847 -14102449 + Lx7 LINE L1 6108 7489 -207 6 1748 387 215 32 0 chrX 152547882 152547975 -14102321 + Lx7 LINE L1 7601 7696 0 6 1748 356 297 91 63 chrX 152548223 152548510 -14101786 + L1MD2 LINE L1 5251 5545 -999 6 1748 459 0 0 0 chrX 152548570 152548621 -14101675 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1748 1773 54 0 0 chrX 152549027 152549250 -14101046 - Lx LINE L1 -845 5809 5587 6 1748 2728 109 37 10 chrX 152549244 152549653 -14100643 + Lx LINE L1 5838 6257 -397 6 1748 573 171 46 61 chrX 152549635 152549766 -14100530 - Lx LINE L1 -107 6547 6419 6 1748 2303 137 38 25 chrX 152549765 152550161 -14100135 + Lx LINE L1 6252 6652 -2 6 1748 747 300 46 33 chrX 152550175 152550568 -14099728 + L1MD2 LINE L1 5850 6247 -510 6 1748 527 74 12 0 chrX 152550701 152550782 -14099514 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 6 1748 1095 273 127 11 chrX 152550886 152551264 -14099032 + RCHARR1 DNA MER1_type 46 467 -507 6 1748 391 143 57 0 chrX 152551267 152551337 -14098959 - RLTR25A LTR ERVK 0 1103 1030 7 1748 1810 128 3 0 chrX 152551337 152551634 -14098662 - L1_Mur2 LINE L1 -2027 3850 3553 7 1748 3204 171 178 44 chrX 152551644 152551708 -14098588 - RLTR25A LTR ERVK -131 972 886 7 1748 471 87 0 0 chrX 152551708 152551777 -14098519 + (TG)n Simple_repeat Simple_repeat 2 70 0 7 1748 3204 171 178 44 chrX 152551777 152552091 -14098205 - RLTR25A LTR ERVK -218 885 507 7 1748 279 0 0 0 chrX 152552091 152552122 -14098174 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 1748 3204 171 178 44 chrX 152552122 152552580 -14097716 - RLTR25A LTR ERVK -597 506 24 7 1748 1500 234 92 17 chrX 152552589 152553067 -14097229 + RCHARR1 DNA MER1_type 461 974 0 6 1748 321 242 50 38 chrX 152553068 152553227 -14097069 + L1MC4a LINE L1 7710 7870 -12 7 1748 252 359 108 0 chrX 152553443 152553638 -14096658 + L1MD LINE L1 5556 5771 -588 7 1748 249 83 0 0 chrX 152555217 152555253 -14095043 + (TA)n Simple_repeat Simple_repeat 2 37 0 7 1748 351 0 0 0 chrX 152555253 152555291 -14095005 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1748 711 271 63 33 chrX 152555330 152555632 -14094664 - L1MA5A LINE L1 -380 5917 5607 7 1748 6879 124 29 2 chrX 152555655 152556761 -14093535 - Lx LINE L1 0 6654 5519 7 1748 763 125 0 27 chrX 152556775 152556923 -14093373 + Lx LINE L1 6504 6647 -7 8 1748 344 190 0 23 chrX 152556926 152556970 -14093326 + A-rich Low_complexity Low_complexity 1 43 0 8 1748 1222 48 0 0 chrX 152556970 152557117 -14093179 + B1_Mm SINE Alu 1 147 0 8 1748 344 190 0 23 chrX 152557117 152557201 -14093095 + A-rich Low_complexity Low_complexity 44 126 0 8 1748 5502 68 1 0 chrX 152557287 152557991 -14092305 - L1_Mus1 LINE L1 0 6567 5863 8 1748 9692 113 1 2 chrX 152557991 152559408 -14090888 + L1_Mus1 LINE L1 4444 5859 -24 8 1748 1602 226 128 22 chrX 152559410 152560035 -14090261 - MYSERV6-int LTR ERVK -171 8788 8098 8 1748 727 176 8 80 chrX 152560037 152560297 -14089999 + MYSERV16_I-int LTR ERVK 1066 1236 -1090 8 1748 4270 115 3 11 chrX 152560297 152560929 -14089367 - Lx2 LINE L1 -320 6677 6051 8 1748 1586 143 92 27 chrX 152560928 152561223 -14089073 + Lx2 LINE L1 6684 6997 0 8 1748 181 283 41 24 chrX 152561232 152561355 -14088941 - L2a LINE L2 -67 3359 3235 8 1748 315 310 34 50 chrX 152561630 152561749 -14088547 - PB1D7 SINE Alu 0 120 1 8 1748 1001 205 27 9 chrX 152561857 152562078 -14088218 - URR1A DNA MER1_type 0 226 2 9 1748 291 378 83 0 chrX 152562943 152563099 -14087197 - MER5A DNA MER1_type 0 189 21 9 1748 5730 72 3 1 chrX 152563229 152563981 -14086315 + L1Md_F2 LINE L1 4833 5585 -298 9 1748 7508 66 1 18 chrX 152563982 152564983 -14085313 + L1Md_F2 LINE L1 5587 6570 -12 9 1748 1181 305 79 10 chrX 152565229 152565646 -14084650 + Lx8 LINE L1 6906 7351 -122 9 1748 214 163 23 23 chrX 152566769 152566813 -14083483 + MIRm SINE MIR 231 274 -2 9 1748 212 383 25 0 chrX 152567035 152567116 -14083180 - MIRc SINE MIR -111 157 75 9 1748 226 331 115 0 chrX 152567239 152567387 -14082909 + L1M5 LINE L1 5286 5450 -674 9 1748 2915 69 15 0 chrX 152567418 152567807 -14082489 + MTB LTR MaLR 4 398 -2 9 1749 23 33 0 0 chrX 152568604 152568634 -14081662 + AT_rich Low_complexity Low_complexity 1 30 0 9 1749 376 364 44 107 chrX 152569363 152569615 -14080681 + ORR1E LTR MaLR 123 358 -1 9 1749 1638 195 72 12 chrX 152569715 152570047 -14080249 + ORR1B2 LTR MaLR 1 352 -15 1 1749 21 0 0 0 chrX 152570333 152570354 -14079942 + AT_rich Low_complexity Low_complexity 1 21 0 1 1749 226 226 0 36 chrX 152570513 152570568 -14079728 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 1 1749 375 83 0 0 chrX 152571385 152571445 -14078851 + (TTTTG)n Simple_repeat Simple_repeat 2 61 0 1 1749 232 379 56 72 chrX 152572437 152572562 -14077734 - LTR16B1 LTR ERVL -357 123 1 1 1749 2261 136 73 3 chrX 152572862 152573230 -14077066 - ORR1B1 LTR MaLR 0 394 1 1 1749 238 262 49 0 chrX 152573849 152573910 -14076386 - ID4 SINE ID -19 64 1 1 1749 409 253 176 24 chrX 152575183 152575438 -14074858 + L1_Mur3 LINE L1 889 1182 -6530 1 1749 237 347 65 0 chrX 152575637 152575761 -14074535 + MIR SINE MIR 56 187 -75 1 1749 2628 73 8 3 chrX 152575796 152576152 -14074144 - L1_Mus3 LINE L1 -6 6632 6275 1 1749 307 361 55 37 chrX 152576598 152576762 -14073534 - MER20 DNA MER1_type 0 219 53 1 1749 231 36 0 0 chrX 152577089 152577117 -14073179 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1749 663 13 0 0 chrX 152578125 152578201 -14072095 + (TG)n Simple_repeat Simple_repeat 1 76 0 1 1749 1865 129 30 62 chrX 152578551 152578889 -14071407 + ORR1A2 LTR MaLR 1 327 0 1 1749 21 0 0 0 chrX 152579797 152579818 -14070478 + AT_rich Low_complexity Low_complexity 1 21 0 1 1749 22 0 0 0 chrX 152580480 152580502 -14069794 + AT_rich Low_complexity Low_complexity 1 22 0 1 1749 1292 256 93 22 chrX 152580541 152580664 -14069632 - L1MA4 LINE L1 -371 5929 5803 1 1749 264 59 0 0 chrX 152580664 152580698 -14069598 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 1749 1292 256 93 22 chrX 152580698 152581162 -14069134 - L1MA4 LINE L1 -498 5802 5300 1 1749 1322 245 110 26 chrX 152581277 152581768 -14068528 - L1MD3 LINE L1 -98 7897 7366 1 1749 2616 249 32 3 chrX 152582092 152582680 -14067616 - Lx5 LINE L1 -1 7049 6445 1 1749 31798 81 2 11 chrX 152582705 152586934 -14063362 + L1Md_F2 LINE L1 357 4542 -1341 1 1749 3321 42 44 98 chrX 152586934 152587436 -14062860 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1749 31798 80 2 4 chrX 152587436 152588478 -14061818 + L1Md_F2 LINE L1 4543 5586 -297 1 1749 7896 43 7 7 chrX 152588478 152589460 -14060836 + L1Md_F2 LINE L1 5587 6568 -14 1 1749 528 16 0 0 chrX 152589885 152589946 -14060350 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 1749 1488 343 54 30 chrX 152590450 152591205 -14059091 - Lx8 LINE L1 -152 7321 6549 1 1749 240 290 0 0 chrX 152591204 152591266 -14059030 + Lx8 LINE L1 6375 6436 -1037 1 1749 245 259 0 0 chrX 152591320 152591384 -14058912 - Lx8 LINE L1 -929 6544 6481 1 1749 575 324 0 6 chrX 152591376 152591550 -14058746 - Lx8 LINE L1 -1030 6443 6271 1 1749 252 0 0 0 chrX 152591679 152591707 -14058589 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 1 1749 435 147 0 13 chrX 152592810 152592886 -14057410 + RMER17C LTR ERVK 1 75 -335 1 1749 1658 173 29 47 chrX 152592902 152593366 -14056930 - RMER17C LTR ERVK -519 439 16 1 1749 462 336 106 22 chrX 152593495 152593863 -14056433 + L1MDa LINE L1 987 1385 -5248 1 1749 328 304 79 15 chrX 152593953 152594219 -14056077 + L1MDa LINE L1 1494 1841 -4792 1 1749 1009 269 125 11 chrX 152594223 152594604 -14055692 - MT2A LTR ERVL -53 548 1 1 1749 643 272 78 75 chrX 152594612 152595092 -14055204 + L1MDa LINE L1 1845 2331 -4302 1 1749 306 0 0 0 chrX 152595092 152595126 -14055170 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1749 441 0 0 0 chrX 152595126 152595174 -14055122 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 1749 643 272 78 75 chrX 152595174 152595384 -14054912 + L1MDa LINE L1 2332 2537 -4096 1 1749 518 356 82 9 chrX 152595434 152595666 -14054630 + B4 SINE B4 3 251 -41 1 1749 576 0 0 0 chrX 152595674 152595738 -14054558 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 1749 369 0 0 0 chrX 152595738 152595778 -14054518 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1749 1809 83 19 19 chrX 152595803 152596072 -14054224 - L1Md_F2 LINE L1 -13 6569 6301 1 1749 630 53 0 0 chrX 152596090 152596166 -14054130 + L1_Mm LINE L1 5538 5613 -270 1 1749 393 245 58 103 chrX 152596171 152596326 -14053970 - Lx9 LINE L1 -183 7461 7314 1 1749 256 296 78 31 chrX 152596382 152596511 -14053785 + Lx6 LINE L1 7299 7433 -27 1 1749 1176 291 93 48 chrX 152596541 152597577 -14052719 + L1MDa LINE L1 4601 5682 -855 1 1749 1446 230 20 15 chrX 152597873 152598270 -14052026 + Lx9 LINE L1 7245 7643 -1 1 1749 4035 228 112 15 chrX 152599531 152600130 -14050166 - Lx9 LINE L1 -22 7622 6988 1 1749 4433 29 2 0 chrX 152600130 152600649 -14049647 - L1Md_T LINE L1 0 6582 6063 1 1749 4035 233 80 26 chrX 152600649 152601416 -14048880 - Lx9 LINE L1 -657 6987 6156 1 1749 216 136 45 0 chrX 152601428 152601472 -14048824 + T-rich Low_complexity Low_complexity 4 49 0 1 1749 5411 254 73 79 chrX 152601495 152602735 -14047561 - L1_Rod LINE L1 -1563 4284 3023 1 1749 321 284 0 0 chrX 152602735 152602802 -14047494 + 4.5SRNA scRNA scRNA 12 78 -16 1 1749 5411 254 73 79 chrX 152602802 152604217 -14046079 - L1_Rod LINE L1 -1563 3022 1580 1 1749 1649 231 72 109 chrX 152604366 152604664 -14045632 - RMER15 LTR ERVL 0 575 288 1 1749 1620 31 5 0 chrX 152604664 152604856 -14045440 - B2_Mm1a SINE B2 0 193 1 1 1749 1649 231 72 109 chrX 152604856 152605082 -14045214 - RMER15 LTR ERVL -288 287 70 1 1749 724 230 0 7 chrX 152605094 152605243 -14045053 - RMER15 LTR ERVL -427 148 1 1 1749 305 383 0 0 chrX 152605243 152605358 -14044938 + MER5A1 DNA MER1_type 47 161 -5 1 1749 2887 150 21 4 chrX 152605376 152605850 -14044446 + RLTR21 LTR ERVK 1 482 -1090 1 1749 2090 243 55 26 chrX 152605856 152606401 -14043895 - Lx2B LINE L1 -19 6981 6421 1 1749 3745 168 43 17 chrX 152606403 152607030 -14043266 + RLTR21 LTR ERVK 472 1107 -465 1 1749 594 0 0 0 chrX 152607030 152607096 -14043200 + (TATATG)n Simple_repeat Simple_repeat 5 70 0 1 1749 3745 168 43 17 chrX 152607096 152607218 -14043078 + RLTR21 LTR ERVK 1108 1240 -332 1 1749 2468 205 23 26 chrX 152607270 152607922 -14042374 - RLTR31_Mur LTR ERVK -2 551 1 1 1749 3069 199 146 18 chrX 152607949 152608732 -14041564 + RMER19B LTR ERVK 1 883 -19 1 1749 3367 18 0 0 chrX 152608733 152609119 -14041177 + L1Md_A LINE L1 5201 5586 -297 1 1749 8435 30 0 0 chrX 152609119 152610115 -14040181 + L1Md_A LINE L1 5587 6582 0 1 1749 1125 45 0 0 chrX 152610124 152610258 -14040038 + B1_Mm SINE Alu 1 134 -13 1 1749 251 229 57 0 chrX 152610332 152610402 -14039894 + RMER12 LTR ERVK 734 807 -515 1 1749 2259 208 49 44 chrX 152610422 152611051 -14039245 + RLTR21 LTR ERVK 1066 1572 0 1 1749 423 0 0 0 chrX 152611364 152611411 -14038885 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 1749 464 32 0 16 chrX 152611411 152611473 -14038823 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 1749 2155 279 110 11 chrX 152611579 152611627 -14038669 - Lx6 LINE L1 -36 7424 7365 1 1749 468 0 0 0 chrX 152611627 152611679 -14038617 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 1749 2161 279 110 11 chrX 152611679 152612274 -14038022 - Lx6 LINE L1 -96 7364 6717 1 1749 358 180 10 10 chrX 152614823 152614924 -14035372 + (TATATG)n Simple_repeat Simple_repeat 2 102 0 1 1749 929 140 29 35 chrX 152616884 152617054 -14033242 - B2_Mm2 SINE B2 -26 169 1 1 1749 878 253 150 12 chrX 152617789 152618115 -14032181 + ORR1D1 LTR MaLR 1 371 -3 1 1749 189 295 0 93 chrX 152618568 152618654 -14031642 - L4 LINE RTE -572 1457 1380 1 1749 245 326 55 48 chrX 152618807 152618952 -14031344 - MLT1H LTR MaLR -392 157 12 1 1749 217 304 0 0 chrX 152618991 152619060 -14031236 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 1749 235 354 81 0 chrX 152619850 152619949 -14030347 + LTR16E1 LTR ERVL 431 537 -1 1 1749 222 128 0 0 chrX 152620192 152620231 -14030065 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1749 183 205 0 0 chrX 152621706 152621745 -14028551 + (TATG)n Simple_repeat Simple_repeat 2 40 0 1 1749 699 243 60 12 chrX 152621874 152622171 -14028125 - ORR1D1 LTR MaLR 0 374 2 1 1749 423 0 0 0 chrX 152622453 152622500 -14027796 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 1749 2434 218 75 11 chrX 152623433 152624050 -14026246 + L1_Mur2 LINE L1 644 1299 -5787 1 1749 4290 153 14 12 chrX 152624083 152624888 -14025408 + L1_Mur2 LINE L1 3998 4787 -1090 1 1749 4120 242 44 25 chrX 152624886 152625948 -14024348 + Lx5 LINE L1 5924 7006 -44 1 1749 2944 116 8 15 chrX 152625963 152626437 -14023859 - RLTR31B_Mm LTR ERVK -86 471 1 1 1749 6419 199 73 40 chrX 152626438 152628208 -14022088 - RMER3D-int LTR ERVK -1 2841 1014 1 1749 633 142 41 8 chrX 152628229 152628350 -14021946 - RMER3D-int LTR ERVK -2232 610 486 1 1749 1229 95 0 125 chrX 152628443 152628659 -14021637 - L1_Mus2 LINE L1 -1 6565 6377 1 1749 260 160 19 57 chrX 152628668 152628721 -14021575 - RMER13B LTR ERVK -857 51 1 1 1749 5564 151 35 29 chrX 152628722 152629007 -14021289 + L1_Mur2 LINE L1 4343 4624 -1253 1 1749 198 0 0 0 chrX 152629007 152629029 -14021267 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1749 5564 151 35 29 chrX 152629029 152629807 -14020489 + L1_Mur2 LINE L1 4625 5412 -465 1 1749 3603 226 77 8 chrX 152630683 152631596 -14018700 - Lx9 LINE L1 -38 7606 6631 1 1749 488 16 16 0 chrX 152631596 152631657 -14018639 + (TCTA)n Simple_repeat Simple_repeat 2 63 0 1 1749 191 182 13 0 chrX 152631662 152631739 -14018557 + (TA)n Simple_repeat Simple_repeat 1 78 0 1 1749 380 197 140 29 chrX 152631874 152632010 -14018286 - Lx9 LINE L1 -1596 6048 5898 1 1749 1111 69 7 0 chrX 152632308 152632453 -14017843 - B1_Mus2 SINE Alu 0 147 2 1 1749 264 336 91 0 chrX 152632517 152632660 -14017636 - Cheshire DNA MER1_type -2234 186 31 1 1749 458 292 122 98 chrX 152632875 152633243 -14017053 + MTEa LTR MaLR 1 377 -2 1 1749 355 343 126 12 chrX 152633803 152634016 -14016280 + MIR SINE MIR 20 260 -8 1 1749 514 319 6 6 chrX 152634027 152634191 -14016105 + Lx7 LINE L1 7138 7301 -395 1 1749 315 0 0 0 chrX 152634321 152634356 -14015940 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 1749 3551 134 13 0 chrX 152635501 152636097 -14014199 + L1_Mur1 LINE L1 3525 4128 -1758 1 1749 886 57 8 0 chrX 152636238 152636362 -14013934 - L1_Mus2 LINE L1 0 6566 6442 1 1749 7574 68 0 6 chrX 152636424 152637494 -14012802 - L1Md_F2 LINE L1 -5 6577 5514 1 1749 12151 75 3 0 chrX 152637494 152639146 -14011150 - L1Md_F2 LINE L1 -1132 4751 3095 1 1749 36 0 0 0 chrX 152639259 152639295 -14011001 + AT_rich Low_complexity Low_complexity 1 36 0 1 1749 405 0 0 0 chrX 152639439 152639484 -14010812 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 1 1749 23 33 0 0 chrX 152639538 152639568 -14010728 + AT_rich Low_complexity Low_complexity 1 30 0 1 1749 23312 132 14 28 chrX 152640057 152641942 -14008354 - L1_Mus3 LINE L1 -6 6632 4742 1 1749 225 65 0 0 chrX 152641942 152641973 -14008323 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1749 23312 167 12 35 chrX 152641973 152645417 -14004879 - L1_Mus3 LINE L1 -1142 4741 1412 1 1749 387 66 0 0 chrX 152645416 152645477 -14004819 + MusHAL1 LINE L1 653 713 -2641 1 1749 2282 250 33 10 chrX 152645475 152646115 -14004181 - L1VL4 LINE L1 -5862 869 148 1 1749 1513 228 80 3 chrX 152646453 152646818 -14003478 - Lx3C LINE L1 -2 6974 6582 1 1749 3432 171 25 3 chrX 152646825 152647453 -14002843 - L1_Mur1 LINE L1 -244 5642 5001 2 1749 641 301 15 10 chrX 152647624 152647829 -14002467 + B3 SINE B2 1 206 -10 2 1749 245 308 73 18 chrX 152648627 152648736 -14001560 - MIR SINE MIR -126 136 22 2 1749 355 213 94 20 chrX 152649682 152649807 -14000489 + PB1D9 SINE Alu 13 144 -4 2 1749 298 288 27 27 chrX 152650684 152650759 -13999537 - LTR16C LTR ERVL -9 480 406 2 1749 239 375 26 42 chrX 152651018 152651210 -13999086 - L2 LINE L2 -488 2931 2743 2 1749 352 316 37 106 chrX 152651263 152651451 -13998845 - MER63A DNA AcHobo -1 209 35 2 1749 181 400 0 0 chrX 152651663 152651743 -13998553 - MIR SINE MIR -20 242 163 2 1749 300 307 103 17 chrX 152652109 152652225 -13998071 - MIR SINE MIR -123 139 14 2 1749 2947 212 142 46 chrX 152652273 152653093 -13997203 + RMER19B LTR ERVK 1 898 -4 2 1749 519 82 12 0 chrX 152653228 152653313 -13996983 - Lx LINE L1 -45 6609 6524 2 1749 278 344 16 27 chrX 152653397 152653516 -13996780 + MLT1A1 LTR MaLR 195 354 -54 2 1749 347 278 148 0 chrX 152653773 152653935 -13996361 - MER5A DNA MER1_type -2 187 2 2 1749 1408 234 38 35 chrX 152654135 152654480 -13995816 + ORR1C2 LTR MaLR 1 346 -38 2 1749 547 261 17 17 chrX 152654489 152654606 -13995690 + B1_Mur2 SINE Alu 12 128 -21 2 1749 22 35 0 0 chrX 152654631 152654660 -13995636 + AT_rich Low_complexity Low_complexity 1 29 0 2 1749 316 115 39 0 chrX 152654671 152654723 -13995573 + ORR1C2 LTR MaLR 331 384 0 2 1749 277 300 28 14 chrX 152654823 152654965 -13995331 - L1MC5 LINE L1 -813 7148 7005 2 1749 3544 80 4 0 chrX 152655202 152655675 -13994621 + L1_Mus1 LINE L1 6093 6567 0 2 1749 370 323 230 23 chrX 152658558 152658818 -13991478 + L1ME1 LINE L1 5372 5671 -508 2 1749 318 26 0 0 chrX 152658818 152658857 -13991439 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1749 370 323 230 23 chrX 152658857 152659075 -13991221 + L1ME1 LINE L1 5672 5949 -230 2 1749 1885 147 25 6 chrX 152659404 152659725 -13990571 - Lx2 LINE L1 0 6997 6671 2 1749 388 127 13 0 chrX 152659852 152659931 -13990365 - L1_Mus3 LINE L1 -1 6637 6558 2 1749 192 135 0 0 chrX 152660442 152660479 -13989817 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 2 1749 258 260 0 0 chrX 152660495 152660545 -13989751 - ID_B1 SINE B4 -56 168 119 2 1749 29 0 0 0 chrX 152660632 152660661 -13989635 + AT_rich Low_complexity Low_complexity 1 29 0 2 1749 392 346 51 32 chrX 152662715 152662873 -13987423 - RSINE1 SINE B4 -2 163 3 2 1749 219 69 0 0 chrX 152664040 152664069 -13986227 + (CAGG)n Simple_repeat Simple_repeat 2 30 0 2 1749 211 271 0 0 chrX 152664069 152664117 -13986179 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1749 660 298 32 70 chrX 152664192 152664477 -13985819 - B4 SINE B4 -16 276 3 2 1749 1095 156 14 14 chrX 152664559 152664767 -13985529 + Lx3B LINE L1 5951 6158 -815 2 1749 1751 131 43 40 chrX 152664767 152665094 -13985202 + Lx3B LINE L1 6643 6970 -3 2 1749 28 0 0 0 chrX 152665102 152665130 -13985166 + AT_rich Low_complexity Low_complexity 1 28 0 2 1749 440 86 14 0 chrX 152665411 152665481 -13984815 + (CATA)n Simple_repeat Simple_repeat 2 72 0 2 1749 458 283 190 112 chrX 152665482 152665851 -13984445 - MT2B LTR ERVL -113 488 10 2 1749 282 56 0 0 chrX 152665962 152665998 -13984298 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1749 4028 96 5 12 chrX 152666291 152666861 -13983435 - L1_Mus1 LINE L1 -4 6563 5998 2 1749 1361 44 0 22 chrX 152666857 152667042 -13983254 - L1Md_F2 LINE L1 -2 6580 6400 2 1749 24381 147 37 42 chrX 152667042 152673070 -13977226 - L1_Mus1 LINE L1 -577 5990 98 2 1749 1664 86 4 35 chrX 152673450 152673704 -13976592 - L1Md_F2 LINE L1 -3 6579 6334 2 1749 1129 82 0 0 chrX 152673760 152673906 -13976390 - B1_Mm SINE Alu 0 147 2 2 1749 1393 82 87 0 chrX 152673917 152674123 -13976173 - L1Md_F2 LINE L1 -11 6571 6348 2 1749 1698 80 0 13 chrX 152674151 152674395 -13975901 + L1_Mm LINE L1 4126 4391 -1755 2 1749 1319 122 61 4 chrX 152674395 152674625 -13975671 + Lx LINE L1 6405 6647 -7 2 1749 503 333 7 28 chrX 152674625 152674670 -13975626 + L1_Mm LINE L1 4392 4434 -1712 2 1749 336 241 44 44 chrX 152674895 152674986 -13975310 - MIR SINE MIR -88 174 84 2 1749 189 364 56 21 chrX 152675130 152675273 -13975023 - L2c LINE L2 -21 3366 3219 2 1749 201 154 0 0 chrX 152676037 152676076 -13974220 + A-rich Low_complexity Low_complexity 1 39 0 2 1749 25 0 0 28 chrX 152676813 152676834 -13973462 + AT_rich Low_complexity Low_complexity 1 21 0 2 1749 2227 113 40 19 chrX 152676834 152677204 -13973092 + L1_Mus4 LINE L1 6258 6635 -1 2 1749 25 0 0 28 chrX 152677204 152677218 -13973078 + AT_rich Low_complexity Low_complexity 1 14 0 2 1749 3575 216 96 11 chrX 152677228 152678879 -13971417 + L1_Mur3 LINE L1 298 2096 -3784 2 1749 837 99 0 0 chrX 152678930 152679051 -13971245 + (GGAA)n Simple_repeat Simple_repeat 1 121 0 2 1749 1219 158 7 41 chrX 152679052 152679343 -13970953 + L1_Mur3 LINE L1 3012 3292 -2588 2 1749 1651 238 133 73 chrX 152679354 152679872 -13970424 + Lx5 LINE L1 6495 7043 -7 2 1749 33 25 0 0 chrX 152679972 152680012 -13970284 + AT_rich Low_complexity Low_complexity 1 40 0 2 1749 1358 214 68 25 chrX 152680056 152680444 -13969852 - Lx7 LINE L1 -1809 5887 5428 2 1749 327 113 0 0 chrX 152680444 152680497 -13969799 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 1749 429 70 0 0 chrX 152680519 152680576 -13969720 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 1749 616 280 19 31 chrX 152680576 152680727 -13969569 - RSINE1 SINE B4 -10 155 7 2 1749 36 23 0 0 chrX 152681173 152681216 -13969080 + AT_rich Low_complexity Low_complexity 1 43 0 2 1749 455 295 80 38 chrX 152682407 152682671 -13967625 + ORSL-2b DNA Tip100 49 323 -185 2 1749 262 365 61 56 chrX 152683650 152683830 -13966466 - LTR33B LTR ERVL -314 189 9 2 1749 613 298 135 37 chrX 152683884 152684128 -13966168 + B4 SINE B4 5 272 -20 2 1749 420 20 0 0 chrX 152684155 152684204 -13966092 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1749 704 227 159 22 chrX 152684677 152685030 -13965266 + Lx9 LINE L1 7075 7640 -4 2 1749 248 304 109 22 chrX 152685213 152685442 -13964854 - MER58B DNA MER1_type -18 323 75 2 1749 1535 263 57 13 chrX 152685519 152685978 -13964318 - Lx8 LINE L1 -599 6874 6396 2 1749 1343 192 26 59 chrX 152685978 152686282 -13964014 - RMER6C LTR ERVK 0 690 397 2 1749 274 349 25 76 chrX 152686284 152686315 -13963981 - B4A SINE B4 -105 187 127 2 1749 345 206 0 0 chrX 152686315 152686378 -13963918 - B1_Mus2 SINE Alu -79 68 6 2 1749 549 209 0 157 chrX 152686353 152686512 -13963784 - MT2B LTR ERVL -314 287 154 2 1749 274 349 25 76 chrX 152686378 152686402 -13963894 - B4A SINE B4 -105 126 76 2 1749 578 211 69 15 chrX 152686434 152686564 -13963732 - RMER6C LTR ERVK -553 137 1 2 1749 503 357 38 8 chrX 152686564 152686829 -13963467 - Lx8 LINE L1 -1072 6401 6129 2 1749 711 24 0 0 chrX 152686963 152687048 -13963248 + (TG)n Simple_repeat Simple_repeat 2 86 0 2 1749 289 331 41 41 chrX 152687259 152687404 -13962892 - Lx9 LINE L1 -1674 5970 5826 2 1749 279 0 0 0 chrX 152687428 152687459 -13962837 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1749 22 35 0 0 chrX 152687517 152687546 -13962750 + AT_rich Low_complexity Low_complexity 1 29 0 2 1749 994 192 88 69 chrX 152687850 152688169 -13962127 - Lx7 LINE L1 0 7696 7372 2 1749 407 98 28 38 chrX 152688179 152688285 -13962011 + (CAGA)n Simple_repeat Simple_repeat 4 108 0 2 1749 4642 224 24 8 chrX 152688327 152689284 -13961012 - Lx7 LINE L1 -358 7338 6367 2 1749 5613 182 60 35 chrX 152689281 152690509 -13959787 - L1_Mur3 LINE L1 -3311 2569 1330 2 1749 1876 159 6 27 chrX 152690509 152690838 -13959458 - Lx3C LINE L1 -2 6974 6653 2 1749 5613 180 61 42 chrX 152690838 152691066 -13959230 - L1_Mur3 LINE L1 -4474 1406 1158 2 1749 1556 80 24 0 chrX 152691066 152691279 -13959017 - L1_Mus1 LINE L1 0 6567 6350 2 1749 1912 195 75 108 chrX 152691279 152691795 -13958501 - L1_Mur3 LINE L1 -6571 1157 690 2 1749 24117 121 8 7 chrX 152691801 152696412 -13953884 + L1_Mus3 LINE L1 2019 6631 -7 2 1749 405 0 0 0 chrX 152696421 152696466 -13953830 + (TAA)n Simple_repeat Simple_repeat 2 46 0 2 1749 327 197 76 8 chrX 152697248 152697366 -13952930 - Lx4B LINE L1 -7 7051 6926 2 1749 244 229 142 22 chrX 152697385 152697519 -13952777 - Lx4B LINE L1 -36 7022 6873 2 1749 212 77 0 25 chrX 152697579 152697619 -13952677 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 2 1749 232 242 29 43 chrX 152697649 152697718 -13952578 + LTR50 LTR ERVL 728 795 0 2 1749 396 0 0 0 chrX 152698250 152698294 -13952002 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 1749 228 197 279 0 chrX 152698796 152698857 -13951439 - RMER17C LTR ERVK -332 78 1 2 1750 1397 36 0 0 chrX 152699112 152699279 -13951017 + L1Md_A LINE L1 5959 6125 -457 2 1750 1715 42 0 0 chrX 152699279 152699495 -13950801 + L1Md_A LINE L1 6367 6582 0 2 1750 254 157 157 0 chrX 152699511 152699581 -13950715 + Lx9 LINE L1 7564 7644 0 2 1750 240 219 47 0 chrX 152699711 152699775 -13950521 - LTR33B LTR ERVL -16 487 421 2 1750 370 331 71 42 chrX 152699968 152700168 -13950128 - LTR50 LTR ERVL -329 191 1 2 1750 21 71 0 0 chrX 152700825 152700867 -13949429 + AT_rich Low_complexity Low_complexity 1 42 0 2 1750 5293 226 63 48 chrX 152701630 152703003 -13947293 - Lx9 LINE L1 -1 7643 6251 2 1750 275 262 0 0 chrX 152703003 152703064 -13947232 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 1750 399 113 0 0 chrX 152703848 152703910 -13946386 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 1750 652 318 44 99 chrX 152703950 152704222 -13946074 + B4A SINE B4 14 270 -22 2 1750 2728 208 68 53 chrX 152704329 152705106 -13945190 + RMER13B LTR ERVK 1 908 0 2 1750 680 284 5 23 chrX 152705278 152705498 -13944798 + B3 SINE B2 1 216 0 2 1750 21 0 0 0 chrX 152705498 152705519 -13944777 + AT_rich Low_complexity Low_complexity 1 21 0 2 1750 204 40 0 0 chrX 152705597 152705622 -13944674 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1750 9020 128 8 14 chrX 152705624 152707265 -13943031 - Lx3C LINE L1 -2 6974 5342 2 1750 180 0 0 0 chrX 152707497 152707517 -13942779 + (TA)n Simple_repeat Simple_repeat 1 20 0 2 1750 25 31 0 0 chrX 152707803 152707835 -13942461 + AT_rich Low_complexity Low_complexity 1 32 0 2 1750 276 412 8 22 chrX 152708894 152709028 -13941268 - B3 SINE B2 -29 187 56 3 1750 21499 149 16 6 chrX 152709342 152715068 -13935228 - L1_Mus2 LINE L1 0 6566 670 3 1750 3994 89 41 2 chrX 152715285 152715846 -13934450 + L1_Mus2 LINE L1 5984 6566 0 3 1750 594 75 0 0 chrX 152716302 152716382 -13933914 + (TA)n Simple_repeat Simple_repeat 2 81 0 3 1750 666 280 100 5 chrX 152716513 152716703 -13933593 + B3 SINE B2 4 211 -5 3 1750 1567 166 32 157 chrX 152716971 152717378 -13932918 - RLTR23 LTR ERV1 0 430 75 3 1750 1107 107 138 11 chrX 152717407 152717596 -13932700 - L1Md_F2 LINE L1 -2 6580 6368 3 1750 5544 106 32 0 chrX 152717596 152719158 -13931138 - L1Md_F LINE L1 -3927 1956 342 3 1750 559 106 35 0 chrX 152719159 152719244 -13931052 - RLTR23 LTR ERV1 -340 90 3 3 1750 294 363 27 14 chrX 152719294 152719442 -13930854 + MER5A DNA MER1_type 40 189 0 3 1750 365 297 31 18 chrX 152719781 152720066 -13930230 - L1M3 LINE L1 -773 5518 5199 3 1750 245 260 57 19 chrX 152720075 152720181 -13930115 - L1M2 LINE L1 -552 5739 5630 3 1750 191 152 0 21 chrX 152720195 152720242 -13930054 + (TTAG)n Simple_repeat Simple_repeat 3 48 0 3 1750 536 331 358 9 chrX 152720271 152720705 -13929591 - MTE-int LTR MaLR -275 1305 721 3 1750 360 229 0 0 chrX 152720851 152720921 -13929375 - MTE-int LTR MaLR -887 693 624 3 1750 234 0 0 0 chrX 152722729 152722755 -13927541 + (CAAAA)n Simple_repeat Simple_repeat 4 29 0 3 1750 344 295 0 11 chrX 152722787 152722876 -13927420 + PB1D10 SINE Alu 22 109 -8 3 1750 238 321 24 12 chrX 152722895 152722980 -13927316 + MIRb SINE MIR 163 248 -20 3 1750 375 155 12 0 chrX 152723427 152723511 -13926785 - Lx5 LINE L1 0 7050 6966 3 1750 661 166 45 76 chrX 152723521 152723678 -13926618 - RMER17C LTR ERVK 0 410 259 3 1750 224 195 40 48 chrX 152723682 152723806 -13926490 + (TTATA)n Simple_repeat Simple_repeat 2 124 0 3 1750 482 161 11 0 chrX 152723818 152723911 -13926385 + (TA)n Simple_repeat Simple_repeat 1 94 0 3 1750 1082 187 10 55 chrX 152723918 152724207 -13926089 - RMER17C LTR ERVK -134 276 1 3 1750 607 93 12 0 chrX 152724207 152724293 -13926003 - RMER17C-int LTR ERVK 0 3238 3152 3 1750 1926 118 195 3 chrX 152724293 152724657 -13925639 + RLTR47_MM LTR ERV1 1 434 -98 3 1750 4703 102 19 103 chrX 152724657 152724998 -13925298 - RMER17C-int LTR ERVK -117 3121 2829 3 1750 1189 48 0 26 chrX 152724998 152725141 -13925155 + B1_Mus2 SINE Alu 1 141 -6 3 1750 485 16 16 0 chrX 152725141 152725203 -13925093 + (CAAAA)n Simple_repeat Simple_repeat 5 67 0 3 1750 4703 108 39 87 chrX 152725210 152725976 -13924320 - RMER17C-int LTR ERVK -410 2828 2172 3 1750 1371 243 104 81 chrX 152726153 152726721 -13923575 - RMER17C-int LTR ERVK -2652 586 6 3 1750 1603 151 21 112 chrX 152726721 152726874 -13923422 - RMER17C LTR ERVK -29 381 235 3 1750 2468 99 16 13 chrX 152726874 152727254 -13923042 + Lx LINE L1 6271 6651 -3 3 1750 1603 151 21 112 chrX 152727254 152727519 -13922777 - RMER17C LTR ERVK -176 234 1 3 1750 6589 202 44 17 chrX 152727519 152728910 -13921386 - Lx5 LINE L1 -95 6955 5528 3 1750 4583 174 13 8 chrX 152728886 152729439 -13920857 + L1_Mur2 LINE L1 4685 5232 -645 3 1750 231 114 0 0 chrX 152729439 152729474 -13920822 + (CATA)n Simple_repeat Simple_repeat 2 36 0 3 1750 4583 174 13 8 chrX 152729474 152729761 -13920535 + L1_Mur2 LINE L1 5233 5528 -349 3 1750 512 126 11 0 chrX 152729792 152729879 -13920417 + (TA)n Simple_repeat Simple_repeat 2 89 0 3 1750 21 0 0 0 chrX 152730130 152730151 -13920145 + AT_rich Low_complexity Low_complexity 1 21 0 3 1750 25 31 0 0 chrX 152730351 152730383 -13919913 + AT_rich Low_complexity Low_complexity 1 32 0 3 1750 407 287 8 83 chrX 152730549 152730682 -13919614 + MER45B DNA Tip100 71 193 -847 3 1750 193 352 93 28 chrX 152731354 152731462 -13918834 - L2a LINE L2 0 3426 3312 3 1750 1689 63 0 0 chrX 152731834 152732056 -13918240 - L1_Mus1 LINE L1 0 6567 6346 3 1750 383 321 37 0 chrX 152733135 152733269 -13917027 - B4A SINE B4 -145 147 9 3 1750 237 33 0 0 chrX 152734478 152734508 -13915788 + (CAA)n Simple_repeat Simple_repeat 2 31 0 3 1750 450 304 7 46 chrX 152734849 152734870 -13915426 - B2_Mm1t SINE B2 -46 147 127 3 1750 471 118 0 0 chrX 152734870 152734946 -13915350 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 1750 720 223 0 17 chrX 152734946 152735076 -13915220 - B3A SINE B2 -67 126 2 3 1750 197 330 120 56 chrX 152735413 152735663 -13914633 - L4 LINE RTE -24 2005 1740 3 1750 245 362 105 7 chrX 152735707 152735860 -13914436 + MER58A DNA MER1_type 2 169 -55 3 1750 585 42 0 0 chrX 152736195 152736267 -13914029 + (GGAA)n Simple_repeat Simple_repeat 3 74 0 3 1750 2615 122 15 10 chrX 152738201 152738608 -13911688 - RLTR9E LTR ERVK 0 409 1 3 1750 507 17 0 0 chrX 152738701 152738761 -13911535 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 1750 1263 94 0 0 chrX 152739686 152739866 -13910430 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 1750 228 67 0 0 chrX 152739866 152739896 -13910400 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 3 1750 1086 78 7 0 chrX 152739899 152740040 -13910256 - B1_Mus1 SINE Alu -6 142 1 3 1750 354 91 0 0 chrX 152740062 152740117 -13910179 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1750 811 337 82 0 chrX 152740129 152740396 -13909900 - B4 SINE B4 -2 290 2 3 1750 333 0 0 0 chrX 152740584 152740621 -13909675 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 3 1750 22 0 0 0 chrX 152741065 152741087 -13909209 + AT_rich Low_complexity Low_complexity 1 22 0 3 1750 1338 134 4 33 chrX 152741527 152741767 -13908529 - Lx2 LINE L1 0 6997 6765 3 1750 6948 122 19 1 chrX 152741756 152742884 -13907412 - Lx2 LINE L1 -352 6645 5497 3 1750 2448 301 89 19 chrX 152743380 152744323 -13905973 - Lx8 LINE L1 -11 7462 6454 3 1750 686 296 8 9 chrX 152744297 152744534 -13905762 + Lx7 LINE L1 5565 5805 -81 3 1750 2625 228 50 67 chrX 152744784 152745502 -13904794 - Lx7 LINE L1 0 7696 6991 3 1750 6059 210 46 54 chrX 152745511 152745951 -13904345 - Lx7 LINE L1 -1522 6174 5727 3 1750 5783 164 32 11 chrX 152745951 152747023 -13903273 + Lx2B LINE L1 5907 7000 0 3 1750 6059 191 50 43 chrX 152747023 152747493 -13902803 - Lx7 LINE L1 -154 5726 5285 3 1750 6505 81 20 3 chrX 152747493 152748388 -13901908 + Lx3_Mus LINE L1 6100 7009 0 3 1750 6059 191 50 43 chrX 152748388 152749015 -13901281 - Lx7 LINE L1 -596 5284 4628 3 1750 432 0 0 0 chrX 152749015 152749063 -13901233 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1750 6059 191 50 43 chrX 152749063 152749253 -13901043 - Lx7 LINE L1 -1253 4627 4423 3 1750 204 83 0 53 chrX 152749253 152749291 -13901005 + (TTTTG)n Simple_repeat Simple_repeat 3 38 0 3 1750 1381 166 166 0 chrX 152749295 152749591 -13900705 - Lx3C LINE L1 -121 6855 6511 3 1750 770 106 49 0 chrX 152749589 152749712 -13900584 + L1_Mur1 LINE L1 4664 4792 -1094 3 1750 884 168 0 0 chrX 152749706 152749849 -13900447 - Lx7 LINE L1 -4003 1877 1735 3 1750 7665 64 3 2 chrX 152749850 152751172 -13899124 - L1Md_F2 LINE L1 -4 6578 5255 3 1750 494 64 52 31 chrX 152751199 152751296 -13899000 - L1Md_F3 LINE L1 0 6584 6486 3 1750 843 184 52 43 chrX 152751297 152751530 -13898766 - Lx7 LINE L1 -4149 1731 1497 3 1750 306 206 0 0 chrX 152751531 152751599 -13898697 + CT-rich Low_complexity Low_complexity 3 70 0 3 1750 1743 88 44 4 chrX 152751601 152751853 -13898443 - Lx LINE L1 -468 6186 5925 3 1750 4048 41 0 0 chrX 152751850 152752334 -13897962 - L1Md_F2 LINE L1 -199 6383 5900 3 1750 3727 35 0 0 chrX 152752333 152752767 -13897529 + L1Md_F2 LINE L1 5450 5883 0 3 1750 969 141 159 5 chrX 152752780 152752994 -13897302 - L1_Mur1 LINE L1 -1396 4490 4244 3 1750 2420 100 24 54 chrX 152753035 152753459 -13896837 - IAPLTR2_Mm LTR ERVK 0 411 1 3 1750 6021 58 4 20 chrX 152753459 152754245 -13896051 - IAPEz-int LTR ERVK 0 6481 5709 3 1750 3139 14 0 0 chrX 152754236 152754593 -13895703 - IAPEz-int LTR ERVK -2124 4357 4001 3 1750 20387 53 32 48 chrX 152754591 152757402 -13892894 - IAPEz-int LTR ERVK -3707 2774 9 3 1750 2498 110 107 30 chrX 152757403 152757844 -13892452 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1750 233 91 0 0 chrX 152757844 152757877 -13892419 + L1_Mus4 LINE L1 5965 5997 -639 3 1750 185 59 59 0 chrX 152757918 152757952 -13892344 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 3 1750 884 130 6 93 chrX 152757952 152758113 -13892183 - B1_Mus2 SINE Alu 0 147 1 3 1750 4343 119 12 8 chrX 152758115 152758781 -13891515 + Lx LINE L1 5986 6654 0 3 1750 816 265 98 4 chrX 152758781 152759035 -13891261 - Lx7 LINE L1 -6961 767 490 3 1750 25 0 0 0 chrX 152759129 152759154 -13891142 + AT_rich Low_complexity Low_complexity 1 25 0 3 1750 332 295 53 9 chrX 152759414 152759527 -13890769 - Lx5 LINE L1 -377 5926 5795 3 1750 789 304 68 28 chrX 152760529 152760779 -13889517 + B4 SINE B4 29 288 -4 3 1750 1007 74 28 17 chrX 152761828 152762006 -13888290 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 3 1750 279 214 0 0 chrX 152762006 152762076 -13888220 + CT-rich Low_complexity Low_complexity 4 73 0 3 1750 21 36 0 0 chrX 152762221 152762249 -13888047 + AT_rich Low_complexity Low_complexity 1 28 0 3 1750 293 268 97 22 chrX 152762260 152762527 -13887769 - L1M4 LINE L1 -2847 3299 3013 3 1750 1073 52 7 0 chrX 152762906 152763042 -13887254 + B1_Mm SINE Alu 1 137 -10 3 1750 383 0 31 46 chrX 152763042 152763107 -13887189 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 3 1750 201 171 0 0 chrX 152763133 152763168 -13887128 + T-rich Low_complexity Low_complexity 1 35 0 3 1750 1801 136 26 3 chrX 152763190 152763492 -13886804 - L1_Mus4 LINE L1 0 6636 6328 3 1750 687 153 8 0 chrX 152763780 152763904 -13886392 - L1_Mur1 LINE L1 -2358 3528 3404 3 1750 6096 90 1 23 chrX 152763911 152764828 -13885468 + L1_Mur1 LINE L1 3485 4381 -1505 3 1750 6386 127 57 5 chrX 152764829 152765891 -13884405 + Lx3_Mus LINE L1 5892 7008 -1 3 1750 4578 149 40 27 chrX 152765902 152766756 -13883540 + L1_Mur1 LINE L1 4979 5843 -34 3 1750 291 286 189 47 chrX 152767210 152767379 -13882917 + MIRb SINE MIR 31 223 -45 3 1750 216 97 0 0 chrX 152768441 152768472 -13881824 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1750 254 221 8 58 chrX 152768761 152768881 -13881415 + (TTATA)n Simple_repeat Simple_repeat 5 118 0 3 1750 2538 207 110 2 chrX 152769366 152769967 -13880329 - Lx9 LINE L1 0 7644 6979 3 1750 337 175 75 0 chrX 152769986 152770066 -13880230 + Lx9 LINE L1 6161 6246 -1398 3 1750 438 188 12 0 chrX 152770095 152770175 -13880121 + Lx9 LINE L1 6306 6386 -1258 3 1750 231 158 26 0 chrX 152770173 152770211 -13880085 + Lx9 LINE L1 6598 6636 -1008 3 1750 626 274 87 94 chrX 152770247 152770706 -13879590 - RLTR12B LTR ERVK -33 495 40 3 1750 1467 212 82 0 chrX 152770741 152771057 -13879239 + Lx9 LINE L1 6656 6997 -647 3 1750 396 40 0 0 chrX 152771720 152771770 -13878526 + (TCCC)n Simple_repeat Simple_repeat 1 50 0 3 1750 330 305 94 10 chrX 152771828 152771959 -13878337 - B1F SINE Alu -3 146 7 3 1750 1531 122 149 19 chrX 152774468 152774759 -13875537 + RLTR19 LTR ERVK 1 335 -380 3 1750 891 311 52 21 chrX 152774798 152775087 -13875209 + Lx8 LINE L1 6516 6813 -660 3 1750 1814 148 0 65 chrX 152775088 152775428 -13874868 + ORR1A3 LTR MaLR 1 318 -8 3 1750 3936 187 152 7 chrX 152775533 152776443 -13873853 - Lx4B LINE L1 -10 7048 6007 3 1750 342 167 0 16 chrX 152776436 152776497 -13873799 - Lx4B LINE L1 -333 6725 6666 3 1750 1329 180 0 5 chrX 152776497 152776720 -13873576 - RMER20B LTR ERVK -405 222 1 3 1750 317 238 47 23 chrX 152777297 152777383 -13872913 + RMER30 DNA MER1_type 109 196 -6 3 1750 192 40 0 0 chrX 152777541 152777566 -13872730 + (TTG)n Simple_repeat Simple_repeat 1 25 0 3 1750 831 189 7 0 chrX 152777585 152777728 -13872568 - B1_Mus1 SINE Alu 0 148 5 3 1750 719 178 0 131 chrX 152778385 152778553 -13871743 - ORR1D1 LTR MaLR -226 148 3 4 1750 24 32 0 0 chrX 152778890 152778921 -13871375 + AT_rich Low_complexity Low_complexity 1 31 0 4 1750 508 338 25 0 chrX 152778924 152779084 -13871212 - RSINE1 SINE B4 0 165 2 4 1750 719 314 99 3 chrX 152779361 152779773 -13870523 - L1MA5 LINE L1 -362 5938 5486 4 1750 256 0 0 71 chrX 152779773 152779815 -13870481 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1750 500 320 142 9 chrX 152779815 152779964 -13870332 - L1MA5 LINE L1 -683 5485 5305 4 1750 423 98 0 0 chrX 152780078 152780139 -13870157 + (TC)n Simple_repeat Simple_repeat 2 62 0 4 1750 249 276 0 0 chrX 152780166 152780242 -13870054 + A-rich Low_complexity Low_complexity 1 76 0 4 1750 28 29 0 0 chrX 152780392 152780427 -13869869 + AT_rich Low_complexity Low_complexity 1 35 0 4 1750 2919 217 75 74 chrX 152780467 152781361 -13868935 - RMER1B Other Other -17 1049 45 4 1750 13129 104 5 9 chrX 152781561 152784150 -13866146 + L1Md_F2 LINE L1 446 3005 -2878 4 1750 7339 33 0 0 chrX 152784161 152785307 -13864989 - L1Md_T LINE L1 -110 6472 5327 4 1750 543 78 78 0 chrX 152785307 152785410 -13864886 + L1Md_F3 LINE L1 6473 6583 -1 4 1750 18688 73 17 4 chrX 152785410 152787968 -13862328 + L1Md_F2 LINE L1 2991 5582 -301 4 1750 7760 53 18 3 chrX 152787968 152788949 -13861347 + L1Md_F2 LINE L1 5587 6582 0 4 1750 3436 243 95 61 chrX 152789086 152790530 -13859766 - Lx5 LINE L1 -18 7032 5524 4 1750 225 290 56 9 chrX 152790626 152790734 -13859562 - L1MA6 LINE L1 -174 6126 6014 4 1750 22 70 0 0 chrX 152792171 152792214 -13858082 + AT_rich Low_complexity Low_complexity 1 43 0 4 1750 641 239 0 43 chrX 152793457 152793597 -13856699 + B1_Mur1 SINE Alu 3 136 -13 4 1750 555 330 10 36 chrX 152793599 152793791 -13856505 - B3A SINE B2 -10 188 2 4 1750 2191 76 53 0 chrX 152794160 152794511 -13855785 + L1_Mus2 LINE L1 6248 6566 0 4 1750 1384 99 5 5 chrX 152795318 152795531 -13854765 - L1Md_A LINE L1 -5921 803 591 4 1750 1947 84 0 0 chrX 152795878 152796128 -13854168 - RLTR45-int LTR ERVK -221 7023 6774 4 1750 22873 178 15 18 chrX 152796137 152801279 -13849017 + Lx LINE L1 529 5648 -238 4 1750 2132 82 3 22 chrX 152801275 152801587 -13848709 + Lx LINE L1 5786 6091 -563 4 1750 363 347 132 0 chrX 152801708 152801852 -13848444 + LTR16A LTR ERVL 263 425 -26 4 1750 1412 61 5 5 chrX 152802104 152802302 -13847994 - L1Md_F2 LINE L1 0 6582 6385 4 1750 330 0 0 0 chrX 152802442 152802485 -13847811 - L1_Mus2 LINE L1 -2 6564 6522 4 1750 1090 224 111 87 chrX 152802485 152802809 -13847487 - ORR1C2 LTR MaLR -49 335 1 4 1750 348 24 0 0 chrX 152803141 152803182 -13847114 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1750 363 366 148 31 chrX 152803206 152803429 -13846867 - LTR16E2 LTR ERVL -29 539 291 4 1750 345 249 56 0 chrX 152803946 152804088 -13846208 + L1MA8 LINE L1 6116 6269 -22 4 1750 1118 88 0 0 chrX 152804232 152804380 -13845916 - B1_Mus1 SINE Alu 0 148 1 4 1750 28 0 0 0 chrX 152804708 152804736 -13845560 + AT_rich Low_complexity Low_complexity 1 28 0 4 1750 25 0 0 0 chrX 152804944 152804969 -13845327 + AT_rich Low_complexity Low_complexity 1 25 0 4 1750 35924 29 0 0 chrX 152805196 152810411 -13839885 + L1Md_A LINE L1 278 5589 -297 4 1750 9022 3 0 0 chrX 152810411 152811407 -13838889 + L1Md_A LINE L1 5590 6585 0 4 1750 11679 25 0 0 chrX 152811425 152812798 -13837498 + L1Md_T LINE L1 4214 5586 -297 4 1750 8978 5 0 0 chrX 152812798 152813794 -13836502 + L1Md_T LINE L1 5587 6582 0 4 1750 414 0 0 0 chrX 152814273 152814319 -13835977 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 4 1750 681 309 55 0 chrX 152814359 152814579 -13835717 + L1MDa LINE L1 27 258 -6375 4 1750 299 312 20 107 chrX 152814597 152814794 -13835502 + MLT-int LTR MaLR 1556 1735 0 4 1750 263 335 45 76 chrX 152814794 152815017 -13835279 + MLT1D LTR MaLR 1 216 -289 4 1750 667 305 60 47 chrX 152815018 152815652 -13834644 + L1MDa LINE L1 3562 4203 -2334 4 1750 3949 179 36 25 chrX 152815645 152816487 -13833809 - L1_Mur1 LINE L1 -5678 1304 454 4 1750 414 273 43 63 chrX 152816489 152816696 -13833600 - L1_Mur1 LINE L1 -6724 258 56 4 1750 4434 97 6 14 chrX 152816695 152817795 -13832501 + Lx3A LINE L1 5433 6599 -374 4 1750 198 123 0 50 chrX 152817835 152817895 -13832401 + GA-rich Low_complexity Low_complexity 2 58 0 4 1750 706 248 0 0 chrX 152817936 152818085 -13832211 + B1_Mur4 SINE Alu 2 150 0 4 1750 22 35 0 0 chrX 152818302 152818331 -13831965 + AT_rich Low_complexity Low_complexity 1 29 0 4 1750 262 333 86 0 chrX 152819473 152819566 -13830730 + MLT1J1 LTR MaLR 5 105 -339 4 1750 313 300 62 71 chrX 152819588 152819814 -13830482 + L1_Rod LINE L1 526 749 -6859 4 1750 595 242 52 77 chrX 152819887 152820120 -13830176 + L1_Rod LINE L1 744 970 -6638 4 1750 707 236 22 45 chrX 152820119 152820341 -13829955 + L1_Rod LINE L1 2413 2629 -3218 4 1750 1663 157 95 13 chrX 152820341 152820645 -13829651 + Lx4B LINE L1 6716 7044 -14 4 1750 879 81 13 20 chrX 152820645 152820797 -13829499 + (GAAA)n Simple_repeat Simple_repeat 3 153 0 4 1750 861 54 0 0 chrX 152821433 152821544 -13828752 + (CA)n Simple_repeat Simple_repeat 2 112 0 4 1750 945 233 78 28 chrX 152821638 152821995 -13828301 - Lx9 LINE L1 -2 7642 7268 4 1750 29 28 0 0 chrX 152822598 152822634 -13827662 + AT_rich Low_complexity Low_complexity 1 36 0 4 1750 25 0 0 0 chrX 152823069 152823094 -13827202 + AT_rich Low_complexity Low_complexity 1 25 0 4 1750 207 275 11 81 chrX 152823359 152823446 -13826850 - MER5B DNA MER1_type -4 174 94 4 1750 353 387 0 0 chrX 152823503 152823622 -13826674 - ID_B1 SINE B4 -4 220 102 4 1750 41 82 0 0 chrX 152823737 152823834 -13826462 + AT_rich Low_complexity Low_complexity 1 97 0 4 1750 228 135 0 0 chrX 152823855 152823892 -13826404 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1750 932 87 0 0 chrX 152823971 152824098 -13826198 + B1_Mus1 SINE Alu 2 128 -20 4 1750 362 284 37 0 chrX 152824122 152824231 -13826065 - B3 SINE B2 -102 114 2 4 1750 646 296 72 30 chrX 152824232 152824595 -13825701 - L1MA6 LINE L1 -47 6253 5876 4 1750 32 26 0 0 chrX 152824614 152824653 -13825643 + AT_rich Low_complexity Low_complexity 1 39 0 4 1750 1524 142 0 30 chrX 152824658 152824927 -13825369 - Lx3A LINE L1 -9 6972 6712 4 1750 555 269 155 14 chrX 152825061 152825486 -13824810 + L1M2 LINE L1 4891 5384 -780 4 1750 403 261 48 30 chrX 152825484 152825650 -13824646 - L1M1 LINE L1 -697 5606 5438 4 1750 208 95 23 23 chrX 152825770 152825813 -13824483 + (CAAAAA)n Simple_repeat Simple_repeat 2 44 0 4 1750 427 352 64 76 chrX 152825822 152826323 -13823973 + Lx8 LINE L1 6950 7444 -29 4 1750 705 302 148 19 chrX 152826519 152826884 -13823412 - L1MA7 LINE L1 -228 6063 5652 4 1750 2952 82 8 95 chrX 152826989 152827475 -13822821 - L1_Mus3 LINE L1 -6 6632 6189 4 1750 1728 57 0 4 chrX 152827475 152827704 -13822592 + L1_Mus3 LINE L1 5942 6169 -469 4 1750 291 308 65 143 chrX 152827704 152828011 -13822285 - ORR1E LTR MaLR 0 359 77 4 1750 22 35 0 0 chrX 152828065 152828094 -13822202 + AT_rich Low_complexity Low_complexity 1 29 0 4 1750 5282 58 3 7 chrX 152828096 152828785 -13821511 + L1Md_F2 LINE L1 5895 6580 -2 4 1750 426 279 6 54 chrX 152828795 152828962 -13821334 - L1MA7 LINE L1 -743 5569 5411 4 1750 5224 193 113 48 chrX 152828970 152829830 -13820466 - Lx7 LINE L1 0 7696 6758 4 218 1364 158 0 9 chrX 152829830 152830053 -13820243 + URR1B DNA MER1_type 5 225 0 4 1751 5224 193 113 48 chrX 152830053 152830225 -13820071 - Lx7 LINE L1 -939 6757 6584 4 1751 303 28 0 0 chrX 152830225 152830261 -13820035 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 1751 5224 193 113 48 chrX 152830261 152830561 -13819735 - Lx7 LINE L1 -1113 6583 6276 4 1751 1079 68 0 52 chrX 152830565 152830719 -13819577 - B1_Mm SINE Alu 0 147 2 4 1751 9520 176 46 70 chrX 152830723 152831812 -13818484 - L1_Mur2 LINE L1 -1902 3978 2888 4 1751 465 19 0 0 chrX 152831812 152831866 -13818430 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 4 1751 9520 185 54 62 chrX 152831866 152833812 -13816484 - L1_Mur2 LINE L1 -2992 2888 831 4 1751 354 320 43 7 chrX 152834373 152834599 -13815697 + L1ME2 LINE L1 5921 6161 -3 4 1751 1659 75 18 0 chrX 152835099 152835327 -13814969 + L1_Mus1 LINE L1 6330 6561 -6 4 1751 767 155 243 0 chrX 152835976 152836157 -13814139 + URR1B DNA MER1_type 1 225 0 4 1751 212 213 43 0 chrX 152836175 152836222 -13814074 - B1F SINE Alu -10 139 91 4 1751 1070 285 15 25 chrX 152836377 152836651 -13813645 - MTEb LTR MaLR -9 370 100 4 1751 207 0 0 0 chrX 152836757 152836780 -13813516 + (TA)n Simple_repeat Simple_repeat 2 24 0 4 1751 6188 223 50 37 chrX 152837150 152838337 -13811959 + Lx7 LINE L1 6152 7353 -343 4 1751 435 83 0 0 chrX 152838337 152838397 -13811899 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 1751 6188 223 50 37 chrX 152838397 152838735 -13811561 + Lx7 LINE L1 7354 7696 0 4 1751 239 338 15 13 chrX 152839125 152839217 -13811079 - ID4_ SINE ID -51 101 9 4 1751 323 238 34 110 chrX 152839239 152839357 -13810939 - PB1D10 SINE Alu -8 109 1 4 1751 25943 82 91 2 chrX 152839672 152844059 -13806237 + L1Md_F2 LINE L1 436 5178 -705 4 1751 7856 54 3 0 chrX 152844059 152845040 -13805256 + L1Md_F2 LINE L1 5587 6570 -12 4 1751 25943 80 110 3 chrX 152845040 152845376 -13804920 + L1Md_F2 LINE L1 5179 5585 -298 4 1751 7974 49 2 3 chrX 152845377 152846374 -13803922 + L1Md_F2 LINE L1 5587 6582 0 4 1751 26 50 0 0 chrX 152847646 152847686 -13802610 + AT_rich Low_complexity Low_complexity 1 40 0 4 1751 829 289 20 73 chrX 152847833 152848079 -13802217 - B4 SINE B4 -14 278 46 4 1751 567 62 0 0 chrX 152848121 152848201 -13802095 + (GA)n Simple_repeat Simple_repeat 1 80 0 4 1751 684 233 37 5 chrX 152848475 152848634 -13801662 + B3 SINE B2 6 181 -14 4 1751 759 268 89 53 chrX 152849000 152849303 -13800993 - Lx8 LINE L1 -19 7454 7141 4 1751 21 36 0 0 chrX 152849322 152849350 -13800946 + AT_rich Low_complexity Low_complexity 1 28 0 4 1751 770 191 84 23 chrX 152849455 152849591 -13800705 - Lx7 LINE L1 0 7696 7561 4 1751 180 0 0 0 chrX 152849591 152849611 -13800685 + (TATAA)n Simple_repeat Simple_repeat 4 23 0 4 1751 770 191 84 23 chrX 152849611 152849688 -13800608 - Lx7 LINE L1 -136 7560 7471 4 1751 2809 216 32 7 chrX 152849701 152850287 -13800009 + Lx7 LINE L1 208 808 -6920 4 1751 356 193 134 0 chrX 152850289 152850408 -13799888 - Lx9 LINE L1 -1 7643 7509 4 1751 877 297 93 74 chrX 152850422 152850906 -13799390 - Lx8 LINE L1 -6 7467 6975 4 1751 252 317 65 56 chrX 152851056 152851163 -13799133 - PB1D7 SINE Alu 0 120 13 4 1751 216 375 0 0 chrX 152851100 152851172 -13799124 - ID_B1 SINE B4 -71 153 82 4 1751 4556 235 70 46 chrX 152851496 152853161 -13797135 + Lx7 LINE L1 1203 2906 -2974 4 1751 1698 118 94 3 chrX 152853161 152853458 -13796838 - RLTR23 LTR ERV1 0 430 107 4 1751 356 105 368 0 chrX 152853538 152853614 -13796682 - RLTR23 LTR ERV1 -326 104 1 4 1751 1113 209 34 71 chrX 152853615 152853996 -13796300 + Lx7 LINE L1 2904 3270 -2610 4 1751 587 182 42 42 chrX 152854002 152854145 -13796151 - RLTR25B LTR ERVK 0 1028 886 5 1751 3913 169 33 76 chrX 152854376 152854599 -13795697 - RLTR25B LTR ERVK -250 778 568 5 1751 4158 84 0 5 chrX 152854599 152855159 -13795137 - L1_Mus1 LINE L1 0 6567 6011 5 1751 3913 169 33 76 chrX 152855159 152855524 -13794772 - RLTR25B LTR ERVK -461 567 218 5 1751 4131 77 0 2 chrX 152855524 152856067 -13794229 - L1_Mus2 LINE L1 -1 6565 6024 5 1751 3913 169 33 76 chrX 152856067 152856290 -13794006 - RLTR25B LTR ERVK -811 217 2 5 1751 3340 219 61 29 chrX 152856296 152856384 -13793912 + Lx7 LINE L1 3281 3385 -2495 4 1751 510 17 0 0 chrX 152856384 152856443 -13793853 + (TG)n Simple_repeat Simple_repeat 1 59 0 5 1751 324 0 0 0 chrX 152856443 152856478 -13793818 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 1751 3340 219 61 29 chrX 152856478 152856725 -13793571 + Lx7 LINE L1 3386 3646 -2234 4 1751 939 78 0 0 chrX 152856725 152856854 -13793442 + (GAAA)n Simple_repeat Simple_repeat 4 132 0 5 1751 3340 219 61 29 chrX 152856854 152857487 -13792809 + Lx7 LINE L1 3647 4281 -1599 4 1751 4475 259 42 40 chrX 152857489 152858783 -13791513 + Lx7 LINE L1 6137 7432 -264 5 1751 216 0 0 0 chrX 152859078 152859102 -13791194 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 1751 411 251 11 79 chrX 152859127 152859317 -13790979 + Lx7 LINE L1 7520 7696 0 5 1751 2234 208 232 26 chrX 152859311 152860082 -13790214 + Lx7 LINE L1 4267 5196 -684 4 1751 5903 212 58 17 chrX 152860090 152860662 -13789634 + Lx7 LINE L1 5425 5993 -1703 4 1751 515 157 10 0 chrX 152860662 152860764 -13789532 + L1_Mus4 LINE L1 6527 6629 -7 5 1751 5903 247 37 42 chrX 152860764 152861954 -13788342 + Lx7 LINE L1 5994 7191 -505 4 1751 533 0 45 0 chrX 152861984 152862051 -13788245 + (TTTTG)n Simple_repeat Simple_repeat 1 70 0 5 1751 925 113 0 0 chrX 152862051 152862184 -13788112 - B1_Mus1 SINE Alu -13 135 3 5 1751 1511 201 73 13 chrX 152862205 152862522 -13787774 + RMER4A LTR ERVK 51 386 -80 5 1751 465 66 0 0 chrX 152862522 152862583 -13787713 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 5 1751 498 239 78 21 chrX 152862583 152862723 -13787573 + RMER4A LTR ERVK 347 582 -3 5 1751 922 248 164 49 chrX 152862732 152863178 -13787118 + Lx7 LINE L1 7200 7696 0 4 1751 360 321 84 5 chrX 152863211 152863446 -13786850 + L1MB2 LINE L1 5814 6076 -95 5 1751 23 68 0 0 chrX 152863725 152863769 -13786527 + AT_rich Low_complexity Low_complexity 1 44 0 5 1751 477 0 0 0 chrX 152863991 152864044 -13786252 + (GA)n Simple_repeat Simple_repeat 2 54 0 5 1751 1497 197 6 6 chrX 152864246 152864563 -13785733 + L1_Mur2 LINE L1 5007 5323 -554 5 1751 1650 284 35 58 chrX 152864631 152865573 -13784723 + Lx5 LINE L1 6223 7046 -4 5 1751 557 279 57 140 chrX 152865687 152865966 -13784330 + ORR1D1 LTR MaLR 1 256 -118 5 1751 616 319 38 42 chrX 152865958 152866171 -13784125 + ORR1D1 LTR MaLR 163 374 0 5 1751 3901 245 39 1 chrX 152867436 152868376 -13781920 - Lx9 LINE L1 -371 7273 6298 5 1751 521 163 11 0 chrX 152868391 152868483 -13781813 - RMER1C Other Other -13 1329 1237 5 1751 2028 138 8 42 chrX 152868483 152868860 -13781436 - RMER17A2 LTR ERVK -542 364 1 5 1751 3136 175 33 5 chrX 152868860 152869491 -13780805 - L1_Mur2 LINE L1 -1500 4377 3729 5 1751 442 264 135 25 chrX 152869577 152869952 -13780344 + L1M4 LINE L1 5174 5597 -581 5 1751 679 360 52 48 chrX 152870418 152870818 -13779478 - MLT1C LTR MaLR -1 466 65 5 1751 10035 148 24 42 chrX 152871535 152873488 -13776808 + L1_Mm LINE L1 2440 4357 -1526 5 1751 34274 70 3 6 chrX 152873480 152878660 -13771636 + L1Md_A LINE L1 420 5586 -297 5 1751 7867 51 3 2 chrX 152878660 152879655 -13770641 + L1Md_F2 LINE L1 5587 6582 0 5 1751 5995 74 5 6 chrX 152879674 152880476 -13769820 + L1Md_F2 LINE L1 5782 6582 0 5 1751 8796 125 29 5 chrX 152880476 152882712 -13767584 + L1_Mus3 LINE L1 4338 6633 -5 5 1751 208 294 14 56 chrX 152884202 152884274 -13766022 + MIR SINE MIR 74 142 -66 5 1751 25 31 0 0 chrX 152884341 152884373 -13765923 + AT_rich Low_complexity Low_complexity 1 32 0 5 1751 191 61 0 29 chrX 152884491 152884525 -13765771 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 5 1751 198 0 0 0 chrX 152884526 152884548 -13765748 + (CAAAA)n Simple_repeat Simple_repeat 5 26 0 5 1751 399 328 0 0 chrX 152884558 152884689 -13765607 - Lx7 LINE L1 -391 7305 7175 5 1751 213 200 0 0 chrX 152884894 152884934 -13765362 + GA-rich Low_complexity Low_complexity 1 40 0 5 1751 289 397 89 16 chrX 152884976 152885291 -13765005 - L4 LINE RTE -197 1832 1495 5 1751 375 23 0 0 chrX 152885447 152885491 -13764805 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1751 808 118 125 0 chrX 152885982 152886118 -13764178 + L1_Mus2 LINE L1 6414 6566 0 5 1751 214 294 0 0 chrX 152886167 152886218 -13764078 + ID4_ SINE ID 1 51 -32 5 1751 186 43 0 0 chrX 152886328 152886351 -13763945 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 5 1751 7137 134 11 11 chrX 152886351 152888137 -13762159 - Lx LINE L1 -12 6642 4860 5 1751 201 129 0 0 chrX 152888613 152888644 -13761652 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1751 459 107 0 0 chrX 152889427 152889502 -13760794 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 1751 523 185 7 7 chrX 152889502 152889649 -13760647 + GA-rich Low_complexity Low_complexity 1 147 0 5 1751 185 119 24 0 chrX 152889902 152889944 -13760352 + (TTTTTG)n Simple_repeat Simple_repeat 5 47 0 5 1751 249 276 140 19 chrX 152890062 152890169 -13760127 + Charlie24 DNA MER1_type 2330 2449 -1 5 1751 290 276 0 125 chrX 152890293 152890413 -13759883 + RSINE1 SINE B4 61 165 0 5 1751 225 0 0 0 chrX 152890446 152890471 -13759825 + (TAAAAA)n Simple_repeat Simple_repeat 5 29 0 5 1751 21 57 0 0 chrX 152890620 152890655 -13759641 + AT_rich Low_complexity Low_complexity 1 35 0 5 1751 766 246 0 0 chrX 152890663 152890801 -13759495 + B3 SINE B2 4 141 -75 5 1751 213 77 18 55 chrX 152890802 152890857 -13759439 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 5 1751 6836 104 9 4 chrX 152890874 152891867 -13758429 - L1_Mus4 LINE L1 -20 6616 5619 5 1751 388 239 0 11 chrX 152891867 152891956 -13758340 + B3 SINE B2 128 215 -1 5 1751 939 157 0 43 chrX 152892014 152892200 -13758096 + Lx2B LINE L1 6823 7000 0 5 1751 332 381 88 43 chrX 152892548 152892877 -13757419 + LTR16A1 LTR ERVL 76 419 -37 5 1751 1361 169 69 23 chrX 152892881 152893108 -13757188 + Lx2B LINE L1 6723 6966 -34 5 1751 3642 75 2 26 chrX 152893108 152893614 -13756682 + L1Md_F2 LINE L1 6077 6570 -12 5 1751 1361 169 69 23 chrX 152893614 152893647 -13756649 + Lx2B LINE L1 6967 6995 -5 5 1751 197 322 203 7 chrX 152893759 152893912 -13756384 - MIR3 SINE MIR -1 207 25 5 1751 2837 76 22 12 chrX 152895187 152895600 -13754696 - L1_Mus3 LINE L1 0 6638 6222 5 1751 468 51 0 0 chrX 152895607 152895666 -13754630 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 1751 294 73 0 0 chrX 152895695 152895736 -13754560 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1751 2318 53 65 15 chrX 152895747 152896072 -13754224 - L1Md_F2 LINE L1 -10 6572 6232 5 1751 5103 189 27 37 chrX 152896231 152897746 -13752550 - L1_Mur1 LINE L1 -1528 2384 888 5 1751 227 156 0 118 chrX 152898233 152898261 -13752035 + T-rich Low_complexity Low_complexity 66 91 0 5 1751 306 0 0 0 chrX 152898261 152898295 -13752001 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1751 849 47 0 0 chrX 152898295 152898400 -13751896 + (GA)n Simple_repeat Simple_repeat 1 106 0 5 1751 227 156 0 118 chrX 152898400 152898472 -13751824 + T-rich Low_complexity Low_complexity 3 65 0 5 1751 376 228 88 10 chrX 152898681 152898783 -13751513 + Lx8 LINE L1 6782 6891 -582 5 1751 262 427 31 54 chrX 152900214 152900568 -13749728 - LTR16C LTR ERVL -5 484 139 5 1751 608 318 5 36 chrX 152901118 152901337 -13748959 - B3 SINE B2 -4 212 1 5 1751 8129 138 40 10 chrX 152901959 152903708 -13746588 + Lx4B LINE L1 5220 7036 -22 5 1751 303 28 0 0 chrX 152903711 152903747 -13746549 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 5 1751 432 0 0 0 chrX 152903867 152903915 -13746381 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1751 199 274 0 46 chrX 152904280 152904345 -13745951 + L3 LINE CR1 2142 2203 -2286 5 1751 716 159 0 67 chrX 152904366 152904386 -13745910 - B1_Mm SINE Alu -21 126 110 5 1751 345 82 0 0 chrX 152904386 152904435 -13745861 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 5 1751 716 159 0 67 chrX 152904435 152904549 -13745747 - B1_Mm SINE Alu -38 109 1 5 1751 1620 37 0 0 chrX 152905011 152905202 -13745094 - B2_Mm1a SINE B2 -2 191 1 5 1751 21 0 0 0 chrX 152905269 152905290 -13745006 + AT_rich Low_complexity Low_complexity 1 21 0 5 1751 23 54 0 0 chrX 152905877 152905914 -13744382 + AT_rich Low_complexity Low_complexity 1 37 0 5 1751 180 222 42 0 chrX 152906044 152906188 -13744108 + (TA)n Simple_repeat Simple_repeat 2 151 0 5 1751 30 45 0 0 chrX 152906560 152906604 -13743692 + AT_rich Low_complexity Low_complexity 1 44 0 5 1751 2417 113 102 0 chrX 152907778 152908159 -13742137 + RLTR9B2 LTR ERVK 1 420 0 5 1751 2072 221 34 34 chrX 152908608 152909114 -13741182 + Lx6 LINE L1 5614 6119 -1341 5 1751 1031 17 0 0 chrX 152909122 152909238 -13741058 - L1Md_F3 LINE L1 -220 6364 6249 5 1751 5550 47 3 3 chrX 152909230 152909914 -13740382 + L1_Mm LINE L1 5088 5771 -112 5 1751 1081 234 56 34 chrX 152909914 152910260 -13740036 + RMER19A LTR ERVK 309 737 0 5 1751 236 239 60 0 chrX 152911670 152911737 -13738559 + (TATG)n Simple_repeat Simple_repeat 3 73 0 5 1751 28 95 0 0 chrX 152912364 152912448 -13737848 + AT_rich Low_complexity Low_complexity 1 84 0 5 1751 468 91 0 0 chrX 152912524 152912590 -13737706 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 5 1751 500 291 6 51 chrX 152912590 152912746 -13737550 - B1F SINE Alu 0 149 1 5 1751 548 294 46 60 chrX 152913398 152913615 -13736681 + B3A SINE B2 1 214 -2 5 1751 220 195 0 0 chrX 152913865 152913906 -13736390 + T-rich Low_complexity Low_complexity 2 42 0 5 1751 1679 178 0 7 chrX 152914375 152914658 -13735638 + Lx2 LINE L1 6567 6847 -150 5 1751 8497 221 77 13 chrX 152914939 152918436 -13731860 - Lx7 LINE L1 -284 7412 3674 5 1751 634 276 80 10 chrX 152918588 152918789 -13731507 + B3 SINE B2 1 215 -1 5 1751 1255 14 7 0 chrX 152918968 152919114 -13731182 + B1_Mus2 SINE Alu 1 147 0 5 1751 519 348 57 47 chrX 152919120 152919362 -13730934 + L1MC5 LINE L1 7017 7259 -702 5 1751 1030 70 35 7 chrX 152919362 152919505 -13730791 - B1_Mus1 SINE Alu 0 148 2 5 1751 519 348 57 47 chrX 152919505 152919669 -13730627 + L1MC5 LINE L1 7260 7426 -535 5 1751 513 278 48 108 chrX 152920340 152920590 -13729706 + MTC LTR MaLR 46 280 -141 5 1751 4125 97 14 81 chrX 152920617 152921031 -13729265 + L1VL2 LINE L1 386 792 -5543 6 1751 1199 41 0 0 chrX 152921031 152921176 -13729120 + B1_Mm SINE Alu 3 147 0 6 1751 6013 84 14 14 chrX 152921176 152922239 -13728057 + L1VL2 LINE L1 793 1826 -1789 6 1751 288 326 0 0 chrX 152922374 152922463 -13727833 - PB1D10 SINE Alu -2 115 27 6 1751 22 80 0 0 chrX 152923320 152923370 -13726926 + AT_rich Low_complexity Low_complexity 1 50 0 6 1751 262 136 48 24 chrX 152923613 152923696 -13726600 + (TATAA)n Simple_repeat Simple_repeat 4 88 0 6 1751 6454 83 22 0 chrX 152923823 152924704 -13725592 + L1_Mus1 LINE L1 5666 6567 0 6 1751 2193 233 153 21 chrX 152925678 152926399 -13723897 + RMER13A LTR ERVK 1 858 -2 6 1751 2184 187 8 5 chrX 152926430 152926823 -13723473 - ORR1B1 LTR MaLR 0 394 1 6 1751 480 18 0 0 chrX 152927117 152927174 -13723122 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1751 934 321 42 25 chrX 152927203 152927959 -13722337 - L1MA4 LINE L1 -411 5889 5104 6 1751 15977 82 7 2 chrX 152928016 152930221 -13720075 + L1Md_F2 LINE L1 3370 5585 -298 6 1751 7765 60 5 0 chrX 152930224 152931211 -13719085 + L1Md_F2 LINE L1 5589 6580 -2 6 1751 1132 218 70 21 chrX 152931243 152931628 -13718668 - L1MA4 LINE L1 -1330 4550 4147 6 1751 6172 59 11 3 chrX 152931628 152932409 -13717887 + L1Md_F2 LINE L1 5783 6570 -12 6 1751 2993 195 88 60 chrX 152932475 152933243 -13717053 - RLTR40 LTR ERVK -10 807 18 6 1751 282 311 22 22 chrX 152933257 152933395 -13716901 + L1M5 LINE L1 5530 5667 -512 6 1751 2630 198 70 20 chrX 152933424 152934008 -13716288 + L1Md_F LINE L1 256 868 -5651 6 1751 3392 78 0 11 chrX 152934016 152934492 -13715804 - L1_Mm LINE L1 -2281 3602 3132 6 1751 1017 315 80 43 chrX 152934730 152935441 -13714855 + Lx7 LINE L1 5590 6343 -1130 6 1751 3220 98 4 7 chrX 152935441 152935902 -13714394 + L1_Mus3 LINE L1 6177 6636 -2 6 1751 1296 84 0 0 chrX 152935905 152936084 -13714212 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 6 1751 738 146 23 122 chrX 152936106 152936229 -13714067 - URR1A DNA MER1_type 0 226 106 6 1751 1009 122 0 0 chrX 152936229 152936368 -13713928 + B1_Mus2 SINE Alu 1 139 -8 6 1751 738 146 23 122 chrX 152936368 152936416 -13713880 - URR1A DNA MER1_type -121 105 72 6 1751 1712 310 36 26 chrX 152936446 152937208 -13713088 + Lx7 LINE L1 6374 7156 -317 6 1751 3267 46 2 2 chrX 152937221 152937617 -13712679 + MTA_Mm LTR MaLR 1 396 0 6 1751 8368 40 0 1 chrX 152937617 152938667 -13711629 + MTA_Mm-int LTR MaLR 1 1049 -49 6 1751 16099 22 0 0 chrX 152938667 152940552 -13709744 + L1Md_T LINE L1 3702 5586 -297 6 1751 8415 32 1 0 chrX 152940552 152941547 -13708749 + L1Md_T LINE L1 5587 6582 0 6 1751 478 15 15 0 chrX 152941547 152941612 -13708684 + MTA_Mm-int LTR MaLR 1033 1098 0 6 1751 3283 46 2 2 chrX 152941612 152942008 -13708288 + MTA_Mm LTR MaLR 1 396 0 6 1751 23 54 0 0 chrX 152942811 152942848 -13707448 + AT_rich Low_complexity Low_complexity 1 37 0 6 1751 941 287 88 14 chrX 152942896 152943179 -13707117 - MTE2b LTR MaLR -6 373 70 6 1751 2590 321 84 9 chrX 152943248 152944152 -13706144 - MTE-int LTR MaLR -15 1565 594 6 1751 189 215 91 15 chrX 152944262 152944328 -13705968 - L2a LINE L2 -135 3291 3221 6 1751 954 249 116 36 chrX 152944682 152944907 -13705389 - B4 SINE B4 -46 246 4 6 1751 384 229 122 19 chrX 152946068 152946175 -13704121 + L2a LINE L2 2803 2920 -499 6 1751 340 165 165 0 chrX 152946224 152946315 -13703981 - Lx LINE L1 0 6997 6892 6 1751 751 111 75 0 chrX 152946311 152946447 -13703849 - Lx LINE L1 -257 6397 6270 6 1751 549 331 89 19 chrX 152946499 152946813 -13703483 + L2a LINE L2 3031 3366 -60 6 1751 4289 100 3 2 chrX 152946964 152947553 -13702743 + L1_Mus3 LINE L1 6043 6632 -6 6 1751 2032 196 37 26 chrX 152947875 152948330 -13701966 - RMER6B LTR ERVK 0 461 2 6 1751 4657 88 3 9 chrX 152949152 152949798 -13700498 - L1Md_F2 LINE L1 -3 6579 5938 6 1751 2402 86 16 41 chrX 152949897 152950284 -13700012 - L1_Mus3 LINE L1 -1 6637 6261 6 1751 927 220 50 25 chrX 152950578 152950858 -13699438 + L1VL2 LINE L1 424 710 -5625 6 1751 1258 177 62 0 chrX 152950865 152951108 -13699188 + L1_Mur2 LINE L1 4902 5159 -718 6 1751 4229 173 106 18 chrX 152951109 152951709 -13698587 + Lx2 LINE L1 5977 6664 -333 6 1751 423 0 0 0 chrX 152951709 152951756 -13698540 + (CAAAA)n Simple_repeat Simple_repeat 4 50 0 6 1751 4229 173 106 18 chrX 152951756 152952087 -13698209 + Lx2 LINE L1 6665 6990 -7 6 1751 333 0 0 0 chrX 152952380 152952417 -13697879 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 6 1751 307 271 45 45 chrX 152952725 152952837 -13697459 + RMER30 DNA MER1_type 72 183 -19 6 1751 21 57 0 0 chrX 152952957 152952992 -13697304 + AT_rich Low_complexity Low_complexity 1 35 0 6 1751 1606 167 36 4 chrX 152952992 152953268 -13697028 - Lx4A LINE L1 0 7058 6774 6 1751 3058 128 29 2 chrX 152953268 152953403 -13696893 + Lx4A LINE L1 5604 5746 -1312 6 1751 315 0 0 0 chrX 152953403 152953438 -13696858 + (TA)n Simple_repeat Simple_repeat 2 36 0 6 1751 3058 128 29 2 chrX 152953438 152953786 -13696510 + Lx4A LINE L1 5747 6099 -959 6 1751 432 0 0 0 chrX 152954423 152954471 -13695825 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1751 351 0 0 0 chrX 152954471 152954509 -13695787 + (GA)n Simple_repeat Simple_repeat 1 39 0 6 1751 1182 299 61 8 chrX 152955367 152955748 -13694548 + MTD LTR MaLR 8 390 -29 6 1751 29 0 0 0 chrX 152955860 152955889 -13694407 + AT_rich Low_complexity Low_complexity 1 29 0 6 1751 3659 121 5 14 chrX 152955978 152956489 -13693807 + L1_Mm LINE L1 5233 5745 -138 6 1751 3260 35 12 38 chrX 152956489 152956911 -13693385 + IAPLTR2a LTR ERVK 1 411 0 6 1751 3659 121 5 14 chrX 152956911 152956968 -13693328 + L1_Mm LINE L1 5746 5796 -87 6 1751 2963 50 167 5 chrX 152956966 152957386 -13692910 - L1Md_F2 LINE L1 -237 5646 5159 6 1751 7472 54 0 5 chrX 152957386 152958318 -13691978 + L1Md_F2 LINE L1 5644 6570 -12 6 1751 523 39 0 25 chrX 152958637 152958717 -13691579 + (TA)n Simple_repeat Simple_repeat 2 79 0 6 1751 4278 243 109 8 chrX 152958755 152959981 -13690315 + Lx9 LINE L1 6289 7638 -6 6 1751 21 0 0 0 chrX 152960001 152960022 -13690274 + AT_rich Low_complexity Low_complexity 1 21 0 6 1751 29 0 0 0 chrX 152960375 152960404 -13689892 + AT_rich Low_complexity Low_complexity 1 29 0 6 1751 1587 47 0 0 chrX 152960689 152960879 -13689417 - B2_Mm1t SINE B2 -2 191 2 6 1752 630 222 8 8 chrX 152961109 152961236 -13689060 + B1_Mur1 SINE Alu 23 149 0 6 1752 755 276 105 20 chrX 152961249 152961497 -13688799 - MER2 DNA MER2_type -76 269 1 6 1752 2662 169 44 2 chrX 152961779 152962448 -13687848 + Lx4A LINE L1 5332 5998 -1060 6 1752 8194 158 27 12 chrX 152962535 152964171 -13686125 - Lx4A LINE L1 0 7058 5380 6 1752 5392 74 18 9 chrX 152964171 152964910 -13685386 - L1_Mus2 LINE L1 0 6566 5822 6 1752 2910 152 4 25 chrX 152964910 152964923 -13685373 - Lx4A LINE L1 -498 5379 5370 6 1752 4152 91 12 8 chrX 152964911 152965507 -13684789 + L1_Mus2 LINE L1 5216 5813 -70 6 1752 2302 144 5 3 chrX 152965505 152965881 -13684415 - L1_Mur2 LINE L1 -473 5404 5028 6 1752 1787 136 73 93 chrX 152965881 152966334 -13683962 - L1_Mur2 LINE L1 -3722 2155 1712 6 1752 2430 146 51 19 chrX 152966330 152966762 -13683534 - Lx2B LINE L1 -23 6977 6532 6 1752 4241 137 7 1 chrX 152966759 152967454 -13682842 - Lx4A LINE L1 -629 5257 4559 6 1752 5430 201 73 34 chrX 152967451 152967620 -13682676 - L1_Mur3 LINE L1 -2783 3097 2960 6 1752 8181 31 0 2 chrX 152967620 152968590 -13681706 + L1Md_F3 LINE L1 5616 6583 -1 6 1752 5430 201 73 34 chrX 152968590 152969973 -13680323 - L1_Mur3 LINE L1 -2921 2959 1484 6 1752 3561 72 4 6 chrX 152970663 152971135 -13679161 - L1_Mus2 LINE L1 -1 6565 6095 6 1752 434 18 18 0 chrX 152971523 152971578 -13678718 + (GTTTG)n Simple_repeat Simple_repeat 5 60 0 6 1752 418 305 33 13 chrX 152971604 152971757 -13678539 - RMER30 DNA MER1_type -20 182 27 6 1752 234 282 51 68 chrX 152972026 152972144 -13678152 + MLT1C LTR MaLR 163 278 -189 6 1752 1077 158 112 10 chrX 152972843 152973048 -13677248 - URR1A DNA MER1_type 0 226 1 6 1752 661 36 0 0 chrX 152973415 152973498 -13676798 + B1_Mur4 SINE Alu 67 149 -1 6 1752 1724 40 18 9 chrX 152973789 152974017 -13676279 + L1Md_F3 LINE L1 6355 6584 0 6 1752 1242 27 0 13 chrX 152975005 152975154 -13675142 - B1_Mm SINE Alu 0 147 1 6 1752 3473 80 6 69 chrX 152975185 152975707 -13674589 - L1_Mus2 LINE L1 0 6566 6078 6 1752 237 322 64 11 chrX 152975707 152975792 -13674504 - PB1D7 SINE Alu -12 108 18 6 1752 495 0 0 0 chrX 152975794 152975849 -13674447 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1752 731 288 6 17 chrX 152975934 152976114 -13674182 - MER58A DNA MER1_type -1 223 46 6 1752 519 284 50 79 chrX 152976114 152976558 -13673738 + L1MA9 LINE L1 5254 5684 -628 6 1752 263 309 121 82 chrX 152976614 152976970 -13673326 + L1MA9 LINE L1 5869 6238 -74 6 1752 182 329 28 28 chrX 152978326 152978398 -13671898 - MIR SINE MIR -99 109 38 6 1752 30771 97 16 9 chrX 152978530 152983741 -13666555 + L1Md_F LINE L1 380 5629 -254 6 1752 7637 70 2 6 chrX 152983750 152984748 -13665548 + L1Md_F2 LINE L1 5587 6580 -2 6 1752 245 342 0 48 chrX 152984839 152984922 -13665374 + ID4 SINE ID 3 81 -2 6 1752 508 291 44 25 chrX 152985550 152985754 -13664542 - L1MB7 LINE L1 -40 6144 5937 6 1752 4331 77 14 21 chrX 152985921 152986543 -13663753 + L1_Mus3 LINE L1 6015 6632 -6 6 1752 1195 208 136 72 chrX 152986588 152986884 -13663412 + ORR1B1 LTR MaLR 29 329 0 6 1752 21 0 0 0 chrX 152987087 152987108 -13663188 + AT_rich Low_complexity Low_complexity 1 21 0 6 1752 1205 257 54 41 chrX 152987267 152987636 -13662660 + ORR1D1 LTR MaLR 1 374 0 6 1752 410 320 44 2 chrX 152987636 152987796 -13662500 - MTE2b LTR MaLR -89 290 116 6 1752 480 256 123 8 chrX 152987838 152987960 -13662336 - MTE2b LTR MaLR -243 136 1 6 1752 229 286 116 23 chrX 152987960 152988038 -13662258 - ID SINE ID -138 86 1 6 1752 418 265 128 45 chrX 152988351 152988616 -13661680 - RLTR15 LTR ERVK -43 316 30 6 1752 4529 169 57 63 chrX 152988714 152989524 -13660772 - MYSERV6-int LTR ERVK -2 8957 8120 6 1752 3338 23 10 5 chrX 152989524 152989918 -13660378 - MTA_Mm LTR MaLR 0 396 1 6 1752 4529 169 57 63 chrX 152989918 152990124 -13660172 - MYSERV6-int LTR ERVK -840 8119 7947 6 1752 3894 67 6 2 chrX 152990124 152990633 -13659663 + L1Md_F2 LINE L1 5076 5586 -297 6 1752 8025 46 2 5 chrX 152990633 152991620 -13658676 + L1Md_F2 LINE L1 5587 6570 -12 6 1752 631 192 20 13 chrX 152991633 152991786 -13658510 - MYSERV-int LTR ERVK -1091 5459 5306 6 1752 515 301 15 93 chrX 152991786 152991991 -13658305 - RMER4A LTR ERVK -27 439 251 6 1752 654 275 111 24 chrX 152991991 152992244 -13658052 - MYSERV-int LTR ERVK -1424 5126 4852 6 1752 15016 161 5 105 chrX 152992263 152994848 -13655448 - L1_Mus4 LINE L1 -15 6621 4512 6 1752 639 39 0 0 chrX 152994848 152994926 -13655370 + (CA)n Simple_repeat Simple_repeat 1 78 0 6 1752 15016 208 9 174 chrX 152994926 152994942 -13655354 - L1_Mur3 LINE L1 -1369 4511 4511 6 1752 455 324 0 46 chrX 152994942 152995094 -13655202 + RSINE1 SINE B4 21 165 0 6 1752 15016 208 9 174 chrX 152995094 152995378 -13654918 - L1_Mur3 LINE L1 -1369 4510 4511 6 1752 529 68 0 43 chrX 152995378 152995470 -13654826 - Lx LINE L1 0 6654 6567 6 1752 16984 165 9 5 chrX 152995470 152999369 -13650927 - L1_Mus4 LINE L1 -1368 4515 604 6 1752 584 318 21 51 chrX 152999369 152999701 -13650595 - MYSERV-int LTR ERVK -4686 1864 1543 6 1752 2300 49 0 0 chrX 152999716 153000000 -13650296 - L1Md_F3 LINE L1 -14 6570 6287 6 1752 786 63 0 4 chrX 153000000 153000109 -13650187 - L1Md_F3 LINE L1 -298 6286 6189 1 1752 1508 319 62 35 chrX 153000140 153000477 -13649819 - MYSERV6-int LTR ERVK -7122 1837 1511 2 1752 1076 149 44 0 chrX 153000477 153000658 -13649638 + B2_Mm2 SINE B2 1 189 -6 3 1752 1508 319 62 35 chrX 153000658 153001591 -13648705 - MYSERV6-int LTR ERVK -7449 1510 532 2 1752 22 35 0 0 chrX 153001948 153001977 -13648319 + AT_rich Low_complexity Low_complexity 1 29 0 4 1752 703 267 99 37 chrX 153002642 153002965 -13647331 - RLTR15 LTR ERVK -16 343 1 5 1752 785 210 192 6 chrX 153003034 153003216 -13647080 - B3 SINE B2 0 216 1 6 1752 1397 285 90 11 chrX 153003290 153003904 -13646392 + Lx6 LINE L1 6455 7460 0 7 1752 1093 299 25 0 chrX 153004470 153004748 -13645548 - B4 SINE B4 0 292 8 8 1752 624 257 107 32 chrX 153004929 153005239 -13645057 + Lx9 LINE L1 7277 7609 -35 9 1752 489 250 26 9 chrX 153005462 153005575 -13644721 - RSINE1 SINE B4 -41 124 10 1 1752 345 267 111 0 chrX 153005769 153005859 -13644437 - PB1 SINE Alu -2 125 26 1 1752 575 320 44 28 chrX 153006428 153006679 -13643617 - MIR SINE MIR 0 262 8 1 1752 986 297 121 10 chrX 153006968 153007383 -13642913 - Lx8 LINE L1 -163 7310 6850 1 1752 1401 310 34 6 chrX 153007364 153007861 -13642435 + Lx8 LINE L1 6391 6901 -572 1 1752 274 281 31 0 chrX 153007974 153008070 -13642226 + MER45B DNA Tip100 91 189 -851 1 1752 711 305 56 35 chrX 153008176 153008495 -13641801 + MER45B DNA Tip100 704 1029 -11 1 1752 294 294 117 36 chrX 153010066 153010220 -13640076 + MIR SINE MIR 59 232 -36 1 1752 762 162 0 0 chrX 153010689 153010825 -13639471 + GA-rich Low_complexity Low_complexity 1 136 0 1 1752 688 285 69 52 chrX 153011162 153011344 -13638952 - MTEa LTR MaLR -140 239 58 1 1752 1253 152 9 13 chrX 153011344 153011571 -13638725 + URR1A DNA MER1_type 1 226 0 1 1752 688 285 69 52 chrX 153011571 153011621 -13638675 - MTEa LTR MaLR -322 57 3 1 1752 297 109 0 0 chrX 153011733 153011779 -13638517 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 1752 287 305 0 47 chrX 153012061 153012147 -13638149 + ID4_ SINE ID 1 82 -1 2 1752 24 32 0 0 chrX 153012179 153012210 -13638086 + AT_rich Low_complexity Low_complexity 1 31 0 2 1752 25 31 0 0 chrX 153012374 153012406 -13637890 + AT_rich Low_complexity Low_complexity 1 32 0 2 1752 6622 94 55 4 chrX 153012945 153014413 -13635883 - L1_Mus3 LINE L1 -3 6635 5095 2 1752 2965 27 0 0 chrX 153014413 153014750 -13635546 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1752 52705 22 17 7 chrX 153014750 153021156 -13629140 + IAPEz-int LTR ERVK 8 6481 0 2 1752 2965 27 0 0 chrX 153021156 153021493 -13628803 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1752 3635 108 10 40 chrX 153021496 153022124 -13628172 - L1_Mus3 LINE L1 -786 5097 4489 2 1752 321 292 36 0 chrX 153022870 153023007 -13627289 + L1MA4 LINE L1 5793 5934 -366 2 1752 443 18 18 0 chrX 153023096 153023152 -13627144 + (TAGA)n Simple_repeat Simple_repeat 3 59 0 2 1752 256 365 94 16 chrX 153023787 153023915 -13626381 - LTR16A LTR ERVL -7 444 307 2 1752 1490 206 111 17 chrX 153025536 153025886 -13624410 + MTD LTR MaLR 18 400 -19 2 1752 361 137 14 0 chrX 153026646 153026719 -13623577 - Lx9 LINE L1 -1 7643 7570 2 1752 199 255 118 0 chrX 153028092 153028143 -13622153 + MER5B DNA MER1_type 7 63 -115 3 1752 25 0 0 0 chrX 153028246 153028271 -13622025 + AT_rich Low_complexity Low_complexity 1 25 0 3 1752 2840 49 0 0 chrX 153028271 153028620 -13621676 + L1Md_F2 LINE L1 6232 6580 -2 3 1752 2358 53 7 0 chrX 153030439 153030738 -13619558 - L1Md_F3 LINE L1 -14 6570 6270 3 1752 371 203 149 0 chrX 153030855 153030929 -13619367 - RSINE1 SINE B4 -78 87 3 3 1752 361 370 19 58 chrX 153032294 153032449 -13617847 + B1F1 SINE Alu 1 149 0 3 1752 305 323 110 57 chrX 153033074 153033337 -13616959 + B4A SINE B4 2 278 -14 3 1752 519 45 0 0 chrX 153033341 153033407 -13616889 + (TC)n Simple_repeat Simple_repeat 1 66 0 3 1752 306 50 0 0 chrX 153033407 153033446 -13616850 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1752 486 0 0 0 chrX 153033446 153033499 -13616797 + (GA)n Simple_repeat Simple_repeat 2 55 0 3 1752 236 185 0 0 chrX 153034046 153034100 -13616196 + T-rich Low_complexity Low_complexity 1 54 0 4 1752 261 340 45 36 chrX 153034363 153034473 -13615823 - L2a LINE L2 -4 3422 3312 4 1752 351 0 0 0 chrX 153034945 153034984 -13615312 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1752 1941 58 4 0 chrX 153035000 153035243 -13615053 + L1_Mus1 LINE L1 6322 6565 -2 4 1752 468 0 0 0 chrX 153035250 153035302 -13614994 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1752 974 92 23 0 chrX 153035303 153035434 -13614862 - B1_Mus1 SINE Alu -13 135 2 4 1752 550 260 0 0 chrX 153038236 153038359 -13611937 - Lx6 LINE L1 -936 6524 6402 4 1752 358 224 103 0 chrX 153038358 153038474 -13611822 + Lx6 LINE L1 7330 7457 -3 4 1752 324 0 0 0 chrX 153038499 153038535 -13611761 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1752 315 344 88 67 chrX 153039029 153039222 -13611074 + LTR16C LTR ERVL 1 197 -292 4 1752 739 188 63 57 chrX 153040106 153040266 -13610030 + ORR1D1 LTR MaLR 6 170 -204 5 1752 207 100 0 0 chrX 153040266 153040296 -13610000 + (CCTG)n Simple_repeat Simple_repeat 1 30 0 5 1752 739 188 63 57 chrX 153040296 153040310 -13609986 + ORR1D1 LTR MaLR 171 181 -193 5 1752 294 236 0 0 chrX 153040310 153040433 -13609863 + CT-rich Low_complexity Low_complexity 2 124 0 5 1752 733 197 11 20 chrX 153040434 153040597 -13609699 + ORR1D1 LTR MaLR 150 315 -69 5 1752 650 122 0 0 chrX 153040616 153040731 -13609565 + L1Md_F2 LINE L1 6467 6581 -1 5 1752 794 196 14 0 chrX 153040917 153041055 -13609241 + B1_Mur4 SINE Alu 2 141 -9 5 1752 442 371 37 5 chrX 153041699 153041913 -13608383 - LTR16C LTR ERVL -7 482 262 5 1752 798 292 49 26 chrX 153041928 153042276 -13608020 + Lx7 LINE L1 6953 7308 -388 5 1752 378 0 0 0 chrX 153042303 153042345 -13607951 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1752 333 401 53 8 chrX 153042509 153042642 -13607654 - LTR16C LTR ERVL -241 248 110 5 1752 239 220 0 0 chrX 153042920 153042979 -13607317 + CT-rich Low_complexity Low_complexity 3 61 0 5 1752 4438 64 2 0 chrX 153043115 153043712 -13606584 + L1Md_F2 LINE L1 4988 5585 -298 5 1752 7742 55 13 4 chrX 153043713 153044698 -13605598 + L1Md_F2 LINE L1 5587 6580 -2 5 1752 30 0 0 0 chrX 153044774 153044804 -13605492 + AT_rich Low_complexity Low_complexity 1 30 0 6 1752 181 245 0 93 chrX 153045869 153045923 -13604373 - L2a LINE L2 0 3426 3378 6 1752 2414 180 17 2 chrX 153046228 153046634 -13603662 - MTC LTR MaLR 0 421 10 6 1752 1103 88 7 0 chrX 153047799 153047946 -13602350 - B1_Mus1 SINE Alu 0 148 1 6 1752 10096 78 8 6 chrX 153048185 153050390 -13599906 - L1Md_F2 LINE L1 -1 6581 4371 6 1752 10946 88 9 1 chrX 153050391 153051291 -13599005 - L1Md_F2 LINE L1 -3003 2880 1978 6 1752 201 39 0 0 chrX 153051291 153051317 -13598979 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 1752 10946 154 44 21 chrX 153051317 153053039 -13597257 - L1Md_F2 LINE L1 -3906 1977 223 6 1752 277 182 55 0 chrX 153053638 153053693 -13596603 - MIRb SINE MIR -39 229 172 6 1752 710 281 63 10 chrX 153054169 153054374 -13595922 + B3 SINE B2 1 216 0 6 1752 8124 111 36 59 chrX 153054484 153056785 -13593511 - L1_Mus3 LINE L1 -4 6634 4411 6 1752 290 317 103 52 chrX 153056921 153057154 -13593142 + L2 LINE L2 2338 2582 -837 6 1752 189 291 117 9 chrX 153057158 153057269 -13593027 + L2 LINE L2 2549 2671 -748 6 1752 2007 148 3 3 chrX 153057308 153057619 -13592677 - RLTR10E LTR ERVK 0 311 1 7 1752 35877 84 2 19 chrX 153057619 153062467 -13587829 - MMERVK10C-int LTR ERVK 0 7581 2813 7 1752 4283 87 0 2 chrX 153062489 153063051 -13587245 - MMERVK10C-int LTR ERVK -5136 2445 1885 7 1752 370 210 123 0 chrX 153063042 153063123 -13587173 - MMERVK10C-int LTR ERVK -5109 1028 938 7 1752 1583 182 192 32 chrX 153063128 153063560 -13586736 - MMERVK10C-int LTR ERVK -4587 819 319 7 1752 2526 141 28 5 chrX 153063539 153063961 -13586335 - MMERVK10C-int LTR ERVK -6709 872 441 7 1752 1332 112 14 10 chrX 153064050 153064257 -13586039 - MMERVK10C-int LTR ERVK -7148 433 226 7 1752 227 205 0 43 chrX 153064257 153064303 -13585993 - RLTR27 LTR ERVK -35 274 231 7 1752 703 99 20 0 chrX 153064303 153064404 -13585892 - MMERVK10C-int LTR ERVK -7478 103 1 7 1752 1981 145 3 3 chrX 153064404 153064715 -13585581 - RLTR10E LTR ERVK 0 311 1 7 1752 23 0 0 0 chrX 153064807 153064830 -13585466 + AT_rich Low_complexity Low_complexity 1 23 0 7 1752 230 265 73 0 chrX 153065064 153065132 -13585164 + Charlie14a DNA MER1_type 1 73 -1091 7 1752 243 0 0 0 chrX 153065346 153065373 -13584923 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 1752 300 237 12 68 chrX 153065396 153065559 -13584737 + (TATATG)n Simple_repeat Simple_repeat 6 159 0 7 1752 1690 332 30 32 chrX 153065621 153066376 -13583920 - Lx9 LINE L1 -274 7370 6617 7 1752 454 274 75 46 chrX 153066378 153066619 -13583677 + Lx9 LINE L1 5782 6029 -1615 7 1752 539 254 7 47 chrX 153066775 153066924 -13583372 + Lx8 LINE L1 6301 6443 -1030 7 1752 571 318 45 49 chrX 153067611 153067908 -13582388 + MLT1G LTR MaLR 3 289 -302 8 1752 253 350 40 10 chrX 153068590 153068691 -13581605 + ORR1E LTR MaLR 39 142 -217 8 1752 1257 168 0 26 chrX 153068717 153068943 -13581353 + URR1A DNA MER1_type 6 225 -1 8 1752 22 0 0 0 chrX 153069218 153069240 -13581056 + AT_rich Low_complexity Low_complexity 1 22 0 8 1752 260 354 0 0 chrX 153069933 153070015 -13580281 + ID4 SINE ID 1 82 -1 8 1752 324 48 0 0 chrX 153070209 153070251 -13580045 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 1752 313 289 28 117 chrX 153070308 153070453 -13579843 + Charlie12 DNA MER1_type 1 132 -2741 8 1752 321 289 11 43 chrX 153070536 153070630 -13579666 - RMER30 DNA MER1_type -110 92 2 8 1752 189 284 54 54 chrX 153070682 153070775 -13579521 + L3 LINE CR1 3962 4054 -435 8 1752 283 250 124 118 chrX 153071724 153071910 -13578386 - B3A SINE B2 -9 189 3 8 1752 7339 95 2 15 chrX 153071920 153073614 -13576682 - L1_Mus2 LINE L1 -2 6564 4895 9 1752 374 247 19 58 chrX 153073748 153073851 -13576445 + RMER15 LTR ERVL 371 469 -106 9 1752 7640 58 0 0 chrX 153073981 153074938 -13575358 + L1Md_T LINE L1 5624 6580 -2 9 1752 503 286 145 20 chrX 153075029 153075325 -13574971 + Charlie13a DNA Charlie 605 937 -577 9 1752 279 0 0 0 chrX 153075493 153075524 -13574772 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 1752 477 0 0 0 chrX 153075524 153075576 -13574720 + (GA)n Simple_repeat Simple_repeat 2 54 0 9 1752 306 0 0 0 chrX 153076629 153076663 -13573633 + (A)n Simple_repeat Simple_repeat 1 34 0 9 1752 201 138 0 0 chrX 153078540 153078569 -13571727 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 9 1752 1838 170 25 27 chrX 153078986 153079354 -13570942 - ORR1B2 LTR MaLR 0 367 1 9 1752 2685 211 91 7 chrX 153080253 153080868 -13569428 + RMER1B Other Other 388 1054 -12 9 1752 664 312 29 10 chrX 153081171 153081378 -13568918 - B3 SINE B2 -5 211 1 1 1752 1174 237 58 18 chrX 153082995 153083270 -13567026 - Lx7 LINE L1 -891 6805 6520 1 1752 1982 276 21 20 chrX 153083266 153083921 -13566375 - Lx7 LINE L1 -1370 6326 5671 1 1752 1899 236 24 24 chrX 153083921 153084390 -13565906 + Lx7 LINE L1 6944 7412 -284 1 1752 949 88 81 0 chrX 153084514 153084650 -13565646 + B1_Mm SINE Alu 1 147 0 1 1752 235 0 57 0 chrX 153084651 153084686 -13565610 + (CAAAAA)n Simple_repeat Simple_repeat 3 39 0 1 1752 1238 309 108 42 chrX 153084931 153085874 -13564422 - L1MC4 LINE L1 -148 7894 6890 1 1752 328 287 0 0 chrX 153086118 153086219 -13564077 + A-rich Low_complexity Low_complexity 1 101 0 1 1752 210 360 23 23 chrX 153086232 153086360 -13563936 - MIRb SINE MIR -15 253 126 1 1752 473 0 18 0 chrX 153087585 153087642 -13562654 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1752 1051 86 6 22 chrX 153087656 153087834 -13562462 + (GGAGA)n Simple_repeat Simple_repeat 2 176 0 1 1752 7823 54 4 22 chrX 153087921 153088937 -13561359 + L1Md_F2 LINE L1 5597 6582 0 1 1752 1960 135 6 55 chrX 153088985 153089331 -13560965 - ORR1A4 LTR MaLR 0 329 1 1 1752 1467 59 21 0 chrX 153089505 153089692 -13560604 - B2_Mm1a SINE B2 -1 192 2 1 1752 1744 75 38 0 chrX 153089803 153090042 -13560254 + L1_Mus2 LINE L1 5863 6110 -456 1 27 39844 26 3 6 chrX 153090051 153096654 -13553642 - L1Md_A LINE L1 0 6582 1 1 1753 334 291 0 0 chrX 153096783 153096869 -13553427 - Lx8 LINE L1 -141 7332 7247 1 1753 298 351 56 56 chrX 153099678 153099838 -13550458 - MLT1A0 LTR MaLR -205 160 1 1 1753 337 203 43 0 chrX 153099842 153099911 -13550385 + L1MC1 LINE L1 5775 5846 -487 1 1753 24 67 0 0 chrX 153099912 153099957 -13550339 + AT_rich Low_complexity Low_complexity 1 45 0 1 1753 22 0 0 0 chrX 153100010 153100032 -13550264 + AT_rich Low_complexity Low_complexity 1 22 0 1 1753 298 328 31 8 chrX 153100062 153100250 -13550046 + L1MC1 LINE L1 6135 6333 -11 1 1753 198 118 0 0 chrX 153100530 153100564 -13549732 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1753 513 264 36 0 chrX 153102415 153102662 -13547634 - Lx9 LINE L1 -4 7640 7355 1 1753 420 277 71 0 chrX 153102664 153102776 -13547520 - B1F2 SINE Alu -21 128 9 1 1753 232 324 14 14 chrX 153102809 153102881 -13547415 - tRNA-Glu-GAG_ tRNA tRNA -3 72 1 1 1753 31 0 0 0 chrX 153103618 153103649 -13546647 + AT_rich Low_complexity Low_complexity 1 31 0 1 1753 206 346 30 0 chrX 153103656 153103757 -13546539 + MIR SINE MIR 147 250 -12 1 1753 482 114 0 12 chrX 153104896 153104976 -13545320 + (TC)n Simple_repeat Simple_repeat 2 80 0 1 1753 216 0 0 0 chrX 153104976 153105000 -13545296 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1753 360 0 0 0 chrX 153105160 153105200 -13545096 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 1 1753 847 83 7 15 chrX 153105267 153105402 -13544894 + (GAAA)n Simple_repeat Simple_repeat 2 135 0 1 1753 276 329 63 0 chrX 153105403 153105482 -13544814 - MER58A DNA MER1_type -140 84 1 1 1753 223 298 0 0 chrX 153106943 153107000 -13543296 - RSINE1 SINE B4 -107 58 2 1 1753 450 59 0 0 chrX 153107125 153107193 -13543103 + L1_Mus2 LINE L1 6499 6566 0 1 1753 267 296 161 0 chrX 153107502 153107583 -13542713 + B3 SINE B2 115 208 -8 1 1753 292 369 0 9 chrX 153107686 153107798 -13542498 + LTR85a LTR Gypsy? 546 656 -46 1 1753 696 193 44 0 chrX 153109068 153109203 -13541093 + B1_Mus2 SINE Alu 1 141 -6 1 1753 391 197 0 28 chrX 153110233 153110337 -13539959 + L1M2 LINE L1 4511 4608 -1538 1 1753 4797 56 0 3 chrX 153110362 153110970 -13539326 + L1Md_F2 LINE L1 4981 5586 -297 1 1753 8033 45 4 6 chrX 153110971 153111966 -13538330 + L1Md_F2 LINE L1 5588 6580 -2 1 1753 358 302 20 5 chrX 153111990 153112186 -13538110 + L1M2 LINE L1 4658 4856 -1287 1 1753 4411 201 62 48 chrX 153112386 153113477 -13536819 - Lx5 LINE L1 -4 7046 5940 1 1753 33497 91 16 2 chrX 153115106 153121432 -13528864 - L1Md_F2 LINE L1 0 6582 163 1 1753 306 0 0 0 chrX 153122932 153122966 -13527330 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1753 615 237 15 15 chrX 153122966 153123103 -13527193 - B1_Mur3 SINE Alu 0 149 13 1 1753 323 215 19 106 chrX 153123012 153123116 -13527180 - MT2B LTR ERVL -344 257 163 1 1753 2557 89 152 86 chrX 153123386 153123852 -13526444 - L1_Mus3 LINE L1 -397 6241 5745 1 1753 2454 113 24 8 chrX 153123852 153124234 -13526062 + L1_Mus3 LINE L1 6246 6633 -5 1 1753 348 285 32 19 chrX 153124234 153124259 -13526037 - Lx9 LINE L1 -1901 5743 5717 1 1753 2720 90 5 13 chrX 153124496 153124891 -13525405 - MTB_Mm LTR MaLR 0 407 16 1 1753 278 0 54 0 chrX 153124901 153124938 -13525358 + (CAAA)n Simple_repeat Simple_repeat 4 42 0 1 1753 597 291 26 97 chrX 153125026 153125254 -13525042 - B3 SINE B2 -4 212 1 1 1753 189 369 68 0 chrX 153125274 153125377 -13524919 + L2a LINE L2 3156 3265 -161 1 1753 238 313 126 7 chrX 153126299 153126450 -13523846 + MIRb SINE MIR 73 241 -27 1 1753 3578 99 0 0 chrX 153127198 153127713 -13522583 - L1_Mm LINE L1 -1552 4331 3817 1 1753 749 77 8 0 chrX 153127715 153127832 -13522464 + L1_Mus1 LINE L1 6450 6567 0 1 1753 435 305 174 29 chrX 153129712 153130259 -13520037 - L1MC3 LINE L1 -18 7767 7142 1 1753 1626 26 5 0 chrX 153130274 153130466 -13519830 - B2_Mm1a SINE B2 0 193 1 1 1753 201 192 25 76 chrX 153130580 153130659 -13519637 + A-rich Low_complexity Low_complexity 1 75 0 1 1753 2257 293 53 9 chrX 153130679 153131360 -13518936 - Lx7 LINE L1 -421 7275 6565 1 1753 631 319 118 67 chrX 153131357 153132086 -13518210 - L1MC3 LINE L1 -639 7146 6381 1 1753 1121 262 164 0 chrX 153132186 153132533 -13517763 + MTD LTR MaLR 2 405 -14 1 1753 3343 278 70 68 chrX 153132731 153134072 -13516224 - Lx8 LINE L1 -42 7431 6088 1 1753 468 0 0 0 chrX 153134395 153134447 -13515849 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 1753 423 0 0 0 chrX 153134447 153134493 -13515803 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1753 768 318 43 16 chrX 153134536 153134859 -13515437 - Lx9 LINE L1 -599 7045 6714 1 1753 337 278 23 81 chrX 153134855 153135197 -13515099 + Lx9 LINE L1 5853 6281 -1363 1 1753 513 89 40 0 chrX 153135197 153135298 -13514998 + (TAGA)n Simple_repeat Simple_repeat 4 108 0 1 1753 1107 246 103 76 chrX 153135778 153136147 -13514149 - MTE2a LTR MaLR 0 379 1 1 1753 289 324 20 0 chrX 153136296 153136398 -13513898 + Lx9 LINE L1 7197 7300 -344 1 1753 607 228 0 8 chrX 153136406 153136530 -13513766 - RMER4A LTR ERVK 0 466 344 1 1753 4222 66 0 0 chrX 153136535 153137068 -13513228 + L1Md_T LINE L1 6049 6581 -1 1 1753 419 250 0 57 chrX 153137074 153137197 -13513099 - MER44B DNA MER2_type -148 402 287 1 1753 1498 201 97 0 chrX 153137196 153137525 -13512771 - RMER4A LTR ERVK -105 361 1 1 1753 606 276 75 5 chrX 153138353 153138553 -13511743 + B3 SINE B2 2 215 -1 1 1753 356 233 149 8 chrX 153138636 153138757 -13511539 - L1_Rod LINE L1 -129 5718 5581 1 1753 575 177 6 45 chrX 153138748 153138908 -13511388 + L1_Rod LINE L1 5130 5302 -578 1 1753 1001 194 152 34 chrX 153138908 153139354 -13510942 + RMER5 LTR ERV1 1 499 -35 1 1753 297 222 37 75 chrX 153139272 153139379 -13510917 - Charlie10 DNA MER1_type -1792 1030 928 1 1753 218 95 24 0 chrX 153139590 153139632 -13510664 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 1753 834 164 6 48 chrX 153139829 153139996 -13510300 - RMER10A LTR ERVL -7 435 276 1 1753 1095 203 10 0 chrX 153141124 153141326 -13508970 - RLTR42-int LTR ERVK -2658 2864 2661 1 1753 27 0 0 0 chrX 153141411 153141438 -13508858 + AT_rich Low_complexity Low_complexity 1 27 0 1 1753 4255 71 15 4 chrX 153142080 153142684 -13507612 - L1_Mus4 LINE L1 -482 6154 5544 1 1753 2977 96 2 53 chrX 153142684 153143158 -13507138 + L1_Mus4 LINE L1 6184 6633 -3 1 1753 1006 133 0 22 chrX 153143170 153143354 -13506942 + GA-rich Low_complexity Low_complexity 1 180 0 1 1753 438 20 0 0 chrX 153143354 153143405 -13506891 + (GAAA)n Simple_repeat Simple_repeat 1 51 0 1 1753 212 213 49 0 chrX 153143667 153143728 -13506568 + GA-rich Low_complexity Low_complexity 3 66 0 1 1753 21 0 0 0 chrX 153144122 153144143 -13506153 + AT_rich Low_complexity Low_complexity 1 21 0 1 1753 22 0 0 0 chrX 153144198 153144220 -13506076 + AT_rich Low_complexity Low_complexity 1 22 0 1 1753 23 114 0 0 chrX 153145666 153145780 -13504516 + AT_rich Low_complexity Low_complexity 1 114 0 1 1753 1961 117 77 162 chrX 153145960 153146206 -13504090 + RLTR23 LTR ERV1 1 197 -233 1 1753 228 100 0 0 chrX 153146206 153146246 -13504050 + (CCA)n Simple_repeat Simple_repeat 1 40 0 1 1753 1961 117 77 162 chrX 153146246 153146469 -13503827 + RLTR23 LTR ERV1 198 429 -1 1 1753 330 26 0 0 chrX 153146844 153146883 -13503413 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 1753 2429 198 43 40 chrX 153146966 153147498 -13502798 + RMER5 LTR ERV1 1 534 0 1 1753 622 227 0 83 chrX 153147499 153147549 -13502747 + L1_Mur3 LINE L1 5300 5348 -532 1 1753 679 294 25 0 chrX 153147549 153147746 -13502550 + B3 SINE B2 5 206 -10 1 1753 622 236 2 78 chrX 153147746 153147905 -13502391 + L1_Mur3 LINE L1 5349 5524 -2358 1 1753 248 333 34 42 chrX 153148668 153148787 -13501509 - Cheshire DNA MER1_type -2149 271 154 1 1753 5944 226 132 24 chrX 153148814 153150548 -13499748 + Lx9 LINE L1 5701 7622 -22 1 1753 681 276 6 46 chrX 153151464 153151639 -13498657 + B4A SINE B4 125 292 0 1 1753 1809 248 128 17 chrX 153152252 153152782 -13497514 - Lx6 LINE L1 -156 7304 6716 1 1753 1309 286 101 16 chrX 153152808 153153333 -13496963 + L1MB2 LINE L1 5487 6043 -128 1 1753 3591 107 6 39 chrX 153153333 153153879 -13496417 - Lx2 LINE L1 0 6997 6470 1 1753 1309 286 101 16 chrX 153153879 153153935 -13496361 + L1MB2 LINE L1 6044 6118 -53 1 1753 22 0 0 0 chrX 153154217 153154239 -13496057 + AT_rich Low_complexity Low_complexity 1 22 0 1 1753 646 171 47 109 chrX 153154240 153154496 -13495800 - Lx9 LINE L1 -7 7637 7398 1 1753 261 260 71 31 chrX 153155979 153156106 -13494190 - Lx7 LINE L1 0 7696 7565 1 1753 189 74 0 0 chrX 153156118 153156145 -13494151 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1753 1778 215 84 7 chrX 153156149 153156575 -13493721 - Lx7 LINE L1 -280 7416 6958 1 1753 310 83 42 0 chrX 153156689 153156737 -13493559 - Lx7 LINE L1 -937 6759 6710 1 1753 548 174 37 0 chrX 153156742 153156851 -13493445 - Lx7 LINE L1 -1790 5906 5794 1 1753 936 141 11 6 chrX 153156936 153157114 -13493182 + CT-rich Low_complexity Low_complexity 2 180 0 2 1753 234 0 0 0 chrX 153157114 153157140 -13493156 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 1753 399 203 20 73 chrX 153157156 153157337 -13492959 - Lx9 LINE L1 -471 7173 6958 1 1753 225 267 0 77 chrX 153157312 153157377 -13492919 - L1_Rod LINE L1 -7049 123 64 2 1753 2572 61 3 0 chrX 153158312 153158640 -13491656 - L1_Mus1 LINE L1 -1 6566 6238 2 1753 311 341 121 53 chrX 153158647 153159002 -13491294 + LTR16C LTR ERVL 21 392 -64 2 1753 488 179 0 19 chrX 153159204 153159312 -13490984 + GA-rich Low_complexity Low_complexity 3 108 0 2 1753 204 245 0 0 chrX 153160036 153160085 -13490211 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 1753 779 272 33 41 chrX 153160087 153160361 -13489935 - L1MA5 LINE L1 -360 5940 5667 2 1753 1393 133 9 0 chrX 153160361 153160586 -13489710 - L1_Mus3 LINE L1 0 6638 6412 2 1753 779 272 33 41 chrX 153160586 153160679 -13489617 - L1MA5 LINE L1 -634 5666 5576 2 1753 466 216 35 62 chrX 153160684 153160866 -13489430 + L1M2 LINE L1 5271 5454 -710 2 1753 1139 89 7 0 chrX 153160910 153161056 -13489240 - B1_Mm SINE Alu 0 147 1 2 1753 3262 77 13 42 chrX 153161061 153161536 -13488760 - L1_Mus2 LINE L1 0 6566 6106 2 1753 3293 74 33 2 chrX 153161536 153161833 -13488463 + MusHAL1 LINE L1 1625 1927 -785 2 1753 207 0 0 0 chrX 153161833 153161856 -13488440 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1753 3293 74 33 2 chrX 153161856 153162044 -13488252 + MusHAL1 LINE L1 1928 2124 -588 2 1753 573 349 164 35 chrX 153162088 153162656 -13487640 + LTR82A LTR ERVL 148 788 -84 2 1753 35728 44 0 3 chrX 153162911 153169323 -13480973 - L1Md_T LINE L1 0 6585 93 2 1753 191 36 0 35 chrX 153169391 153169420 -13480876 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 2 1753 216 0 0 0 chrX 153170547 153170571 -13479725 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 1753 542 128 0 11 chrX 153170571 153170666 -13479630 + (TA)n Simple_repeat Simple_repeat 2 95 0 2 1753 1508 274 165 30 chrX 153170795 153171149 -13479147 - Lx7 LINE L1 -1795 5901 5484 2 1753 4101 37 0 0 chrX 153171149 153171636 -13478660 - L1Md_F2 LINE L1 -12 6570 6084 2 1753 1508 302 115 33 chrX 153171636 153172315 -13477981 - Lx7 LINE L1 -397 5483 4782 2 1753 508 313 65 17 chrX 153172429 153172660 -13477636 - Lx7 LINE L1 -2127 4013 3744 2 1753 2819 288 118 25 chrX 153172675 153174513 -13475783 - Lx8 LINE L1 -5 7468 5442 2 1753 1297 118 0 39 chrX 153174678 153174881 -13475415 - B2_Mm2 SINE B2 0 195 1 2 1753 327 250 219 0 chrX 153175706 153175870 -13474426 - L1MEf LINE L1 -3989 2211 2012 2 1753 614 283 134 8 chrX 153175929 153176168 -13474128 + Lx6 LINE L1 6577 6845 -615 2 1753 330 212 0 0 chrX 153176170 153176250 -13474046 - L1MB4 LINE L1 -277 5903 5824 2 1753 2454 291 38 95 chrX 153176274 153177179 -13473117 - Lx5 LINE L1 -18 7032 6180 2 1753 283 213 121 9 chrX 153177184 153177304 -13472992 - L1MB4 LINE L1 -374 5809 5677 2 1753 892 197 125 87 chrX 153177790 153178101 -13472195 - RMER17C LTR ERVK 0 410 88 2 1753 30737 105 11 4 chrX 153178105 153183663 -13466633 + L1Md_F2 LINE L1 98 5586 -297 2 1753 7185 90 8 2 chrX 153183663 153184652 -13465644 + L1Md_F2 LINE L1 5587 6581 -1 2 1753 653 185 0 33 chrX 153184659 153184810 -13465486 - RMER17C LTR ERVK -264 146 1 2 1753 297 250 0 0 chrX 153184831 153184887 -13465409 - RSINE1 SINE B4 -69 96 41 2 1753 22 0 0 0 chrX 153184923 153184945 -13465351 + AT_rich Low_complexity Low_complexity 1 22 0 2 1753 9238 111 20 12 chrX 153185090 153186541 -13463755 + Lx3_Mus LINE L1 5546 7006 -3 2 1753 5489 95 47 36 chrX 153186541 153187401 -13462895 + Lx LINE L1 5783 6651 -3 2 1753 429 252 0 36 chrX 153187767 153187878 -13462418 + B3 SINE B2 1 107 -109 2 1753 232 312 0 0 chrX 153187886 153187950 -13462346 - Lx9 LINE L1 -1215 6429 6366 2 1753 2901 281 127 44 chrX 153188008 153188348 -13461948 + Lx8 LINE L1 6196 6530 -943 2 1753 338 0 88 0 chrX 153188348 153188405 -13461891 + (TTTG)n Simple_repeat Simple_repeat 2 63 0 2 1753 1173 55 14 0 chrX 153188412 153188557 -13461739 - B1_Mus2 SINE Alu 0 147 1 2 1753 2901 281 127 44 chrX 153188557 153188821 -13461475 + Lx8 LINE L1 6531 6844 -629 2 1753 4183 54 2 8 chrX 153188821 153189343 -13460953 - MURVY-LTR LTR ERV1 0 519 1 2 1753 2901 281 127 44 chrX 153189343 153189784 -13460512 + Lx8 LINE L1 6845 7350 -123 2 1753 324 0 0 0 chrX 153189784 153189820 -13460476 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 2 1753 2901 281 127 44 chrX 153189820 153189942 -13460354 + Lx8 LINE L1 7351 7469 -4 2 1753 7067 171 24 10 chrX 153190082 153192148 -13458148 - Lx2B LINE L1 -4 6996 4889 2 1753 1305 134 109 0 chrX 153192146 153192394 -13457902 - L1MD LINE L1 -1075 2839 2576 2 1753 510 83 0 0 chrX 153193080 153193152 -13457144 + (TG)n Simple_repeat Simple_repeat 2 73 0 2 1753 233 284 0 0 chrX 153193577 153193658 -13456638 - L1MC1 LINE L1 -12 6332 6252 2 1753 29 60 0 0 chrX 153193895 153193945 -13456351 + AT_rich Low_complexity Low_complexity 1 50 0 2 1753 1602 102 4 4 chrX 153194284 153194521 -13455775 + L1_Mus2 LINE L1 6327 6563 -3 2 1753 22 0 0 0 chrX 153194535 153194557 -13455739 + AT_rich Low_complexity Low_complexity 1 22 0 2 1753 343 287 35 0 chrX 153194614 153194701 -13455595 + PB1D10 SINE Alu 26 115 -2 2 1753 5775 94 29 10 chrX 153194844 153196464 -13453832 - L1VL2 LINE L1 -1789 1826 179 2 1753 871 288 57 28 chrX 153196478 153196832 -13453464 - L1MC1 LINE L1 -142 6191 5828 2 1753 452 364 43 0 chrX 153197397 153197537 -13452759 - B1F SINE Alu -3 146 1 2 1753 494 244 71 22 chrX 153197630 153197814 -13452482 - L1MB5 LINE L1 -172 6002 5810 2 1753 32569 68 1 3 chrX 153198747 153203807 -13446489 + L1Md_A LINE L1 533 5586 -297 2 1753 8810 14 0 0 chrX 153203807 153204803 -13445493 + L1Md_A LINE L1 5587 6582 0 2 1753 258 232 0 14 chrX 153204891 153204961 -13445335 + (TA)n Simple_repeat Simple_repeat 2 70 0 2 1753 435 149 0 0 chrX 153204961 153205068 -13445228 + (TAGA)n Simple_repeat Simple_repeat 4 110 0 2 1753 516 16 0 0 chrX 153205068 153205129 -13445167 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1753 615 61 23 123 chrX 153205490 153205620 -13444676 - L1Md_F2 LINE L1 0 6582 6466 2 1753 7099 68 1 4 chrX 153205620 153206532 -13443764 + L1Md_F2 LINE L1 5653 6561 -21 2 1753 4204 79 0 14 chrX 153206557 153207133 -13443163 + L1Md_F2 LINE L1 6005 6572 -10 2 1753 267 257 48 19 chrX 153207277 153207380 -13442916 - Lx7 LINE L1 0 7696 7591 2 1753 558 0 0 0 chrX 153207384 153207446 -13442850 + (TC)n Simple_repeat Simple_repeat 1 62 0 2 1753 4520 217 72 46 chrX 153207625 153208136 -13442160 - Lx7 LINE L1 -396 7300 6778 2 1753 945 179 11 37 chrX 153208136 153208327 -13441969 - B2_Mm2 SINE B2 -9 186 1 2 1753 4520 217 72 46 chrX 153208327 153208910 -13441386 - Lx7 LINE L1 -919 6777 6173 2 1753 441 0 0 0 chrX 153208910 153208959 -13441337 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1753 4520 217 72 46 chrX 153208959 153208994 -13441302 - Lx7 LINE L1 -1524 6172 6140 2 1753 291 347 48 57 chrX 153209389 153209618 -13440678 - MLT1E1A LTR MaLR -3 677 451 2 1753 272 287 79 22 chrX 153209894 153209983 -13440313 - MLT1E1A LTR MaLR -585 95 2 2 1753 4313 105 3 0 chrX 153210153 153210754 -13439542 - L1_Mus1 LINE L1 0 5883 5281 2 1753 4919 82 1 0 chrX 153210754 153211410 -13438886 + L1_Mus1 LINE L1 5902 6558 -9 2 1753 181 330 56 65 chrX 153213317 153213424 -13436872 + L4 LINE RTE 1037 1142 -887 2 1753 373 304 405 52 chrX 153213750 153213991 -13436305 - L1MA6 LINE L1 -12 6990 6665 2 1753 198 0 0 0 chrX 153213991 153214013 -13436283 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 2 1753 1026 75 0 0 chrX 153214015 153214148 -13436148 - B1_Mus1 SINE Alu -15 133 1 2 1753 234 263 37 92 chrX 153214148 153214236 -13436060 - L1MA6 LINE L1 -338 6664 6578 2 1753 342 136 37 0 chrX 153214284 153214365 -13435931 + CT-rich Low_complexity Low_complexity 1 84 0 2 1753 1635 270 70 52 chrX 153214367 153215771 -13434525 - L1MA6 LINE L1 -509 6484 5057 2 1753 2146 257 30 13 chrX 153215803 153216336 -13433960 - Lx6 LINE L1 0 7460 6919 2 1753 769 267 128 18 chrX 153216341 153216741 -13433555 - L1MA6 LINE L1 -1771 5074 4631 2 1753 696 24 0 0 chrX 153216741 153216826 -13433470 - BC1_Mm scRNA scRNA -67 85 1 2 1753 1007 281 56 20 chrX 153216826 153217276 -13433020 - L1MA6 LINE L1 -2205 4640 4175 2 1753 799 311 102 40 chrX 153217265 153217991 -13432305 - Lx9 LINE L1 -31 7613 6843 2 1753 752 278 100 53 chrX 153218100 153218549 -13431747 - L1MA6 LINE L1 -3269 3576 3107 2 1753 464 252 81 74 chrX 153218653 153219099 -13431197 - L1MA6 LINE L1 -4548 2301 1519 2 1753 201 132 0 0 chrX 153220949 153220987 -13429309 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2 1753 315 0 0 0 chrX 153221421 153221456 -13428840 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1753 653 24 12 0 chrX 153223077 153223160 -13427136 + (GAAA)n Simple_repeat Simple_repeat 4 87 0 2 1754 1181 213 56 0 chrX 153223983 153224251 -13426045 - RMER1C Other Other -3 1339 1057 2 1754 413 114 14 0 chrX 153224267 153224337 -13425959 - URR1B DNA MER1_type 0 225 155 2 1754 3167 106 61 18 chrX 153225377 153225868 -13424428 + L1VL2 LINE L1 279 790 -5545 2 1754 253 194 83 0 chrX 153225950 153226022 -13424274 + L1M2 LINE L1 2745 2822 -3321 2 1754 897 10 0 0 chrX 153226595 153226697 -13423599 + (CTTTG)n Simple_repeat Simple_repeat 3 104 0 2 1754 466 260 0 10 chrX 153226697 153226794 -13423502 - PB1D9 SINE Alu -12 108 13 2 1754 247 291 71 93 chrX 153226704 153226844 -13423452 - MT2B LTR ERVL -347 254 118 2 1754 1596 42 0 0 chrX 153227097 153227286 -13423010 - L1_Mus1 LINE L1 -215 6352 6164 2 1754 1543 62 19 5 chrX 153227286 153227496 -13422800 + L1_Mus1 LINE L1 6355 6567 0 2 1754 646 218 271 0 chrX 153227609 153227779 -13422517 - B3 SINE B2 0 216 1 2 1754 529 314 32 68 chrX 153228105 153228324 -13421972 - B3 SINE B2 -5 211 1 2 1754 277 288 25 12 chrX 153228408 153228489 -13421807 + B4 SINE B4 3 84 -208 2 1754 212 149 0 21 chrX 153228558 153228606 -13421690 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1754 345 292 28 45 chrX 153228734 153228910 -13421386 - L1M2 LINE L1 -1453 4690 4518 2 1754 568 262 61 6 chrX 153228901 153229115 -13421181 - L1M2 LINE L1 -2328 3815 3591 2 1754 7769 55 12 8 chrX 153229290 153230849 -13419447 - L1Md_F2 LINE L1 -3 6579 5018 2 1754 263 305 103 95 chrX 153230868 153230984 -13419312 - B1F SINE Alu 0 117 1 2 1754 352 266 95 18 chrX 153231005 153231175 -13419121 - L1M2 LINE L1 -2878 3265 3084 2 1754 259 275 12 0 chrX 153231156 153231236 -13419060 - L1_Mur3 LINE L1 -2867 3013 2933 2 1754 312 319 122 47 chrX 153231399 153231652 -13418644 - L1M2 LINE L1 -3435 2708 2437 2 1754 298 301 19 46 chrX 153231690 153231798 -13418498 + RMER12 LTR ERVK 746 850 -472 2 1754 216 204 0 0 chrX 153231822 153231866 -13418430 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 2 1754 9247 91 20 4 chrX 153231866 153233747 -13416549 - Lx3A LINE L1 -8 6973 5063 2 1754 245 283 0 0 chrX 153233755 153233815 -13416481 + L1MD2 LINE L1 6068 6127 -232 2 1754 3054 54 53 10 chrX 153233995 153234409 -13415887 + LTRIS2 LTR ERV1 5 436 -128 2 1754 14203 89 9 8 chrX 153234607 153234773 -13415523 - L1_Mur1 LINE L1 -819 5067 4912 2 1754 4840 135 122 9 chrX 153234773 153235634 -13414662 + RMER17B LTR ERVK 1 958 0 2 1754 14203 89 9 8 chrX 153235634 153237554 -13412742 - L1_Mur1 LINE L1 -975 4911 2980 2 1754 3406 88 86 8 chrX 153237544 153238456 -13411840 - L1_Mur1 LINE L1 -4193 1693 711 2 1754 335 265 263 19 chrX 153238461 153238643 -13411653 + L1_Mur1 LINE L1 238 510 -6472 2 1754 23 54 0 0 chrX 153238717 153238754 -13411542 + AT_rich Low_complexity Low_complexity 1 37 0 2 1754 382 336 104 0 chrX 153239044 153239178 -13411118 - MER58A DNA MER1_type -76 148 1 3 1754 633 92 0 0 chrX 153239307 153239405 -13410891 + (TC)n Simple_repeat Simple_repeat 2 99 0 3 1754 1931 198 102 5 chrX 153239923 153240345 -13409951 - Lx3C LINE L1 0 6976 6514 3 1754 21 36 0 0 chrX 153241251 153241279 -13409017 + AT_rich Low_complexity Low_complexity 1 28 0 3 1754 189 107 0 0 chrX 153242035 153242063 -13408233 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 1754 1047 248 84 11 chrX 153242405 153242772 -13407524 - L1MA4 LINE L1 -373 5927 5534 3 1754 1536 294 120 29 chrX 153242890 153242988 -13407308 - L1M3 LINE L1 -1834 4306 4210 3 1754 673 71 17 17 chrX 153242988 153243103 -13407193 - L1_Mus3 LINE L1 0 6638 6524 3 1754 1536 294 120 29 chrX 153243103 153243855 -13406441 - L1M3 LINE L1 -1931 4209 3379 3 1754 398 276 26 8 chrX 153244199 153244316 -13405980 + PB1D7 SINE Alu 1 119 -1 3 1754 49 0 0 0 chrX 153244812 153244861 -13405435 + AT_rich Low_complexity Low_complexity 1 49 0 3 1754 9362 130 14 11 chrX 153245737 153247322 -13402974 + Lx4A LINE L1 5463 7055 -3 3 1754 31 0 0 0 chrX 153247322 153247353 -13402943 + AT_rich Low_complexity Low_complexity 1 31 0 3 1754 23 0 0 0 chrX 153247630 153247653 -13402643 + AT_rich Low_complexity Low_complexity 1 23 0 3 1754 29 47 0 0 chrX 153247716 153247759 -13402537 + AT_rich Low_complexity Low_complexity 1 43 0 3 1754 493 348 6 6 chrX 153247762 153247924 -13402372 + RSINE1 SINE B4 4 165 0 3 1754 23 0 0 0 chrX 153247932 153247955 -13402341 + AT_rich Low_complexity Low_complexity 1 23 0 3 1754 2002 69 7 11 chrX 153248221 153248276 -13402020 + MTB LTR MaLR 123 179 -221 3 1754 5611 71 7 5 chrX 153248276 153249028 -13401268 + L1Md_F2 LINE L1 5823 6575 -7 3 1754 2002 69 7 11 chrX 153249028 153249251 -13401045 + MTB LTR MaLR 180 400 0 3 1754 4266 81 31 8 chrX 153249273 153249886 -13400410 + L1_Mus3 LINE L1 5998 6624 -14 3 1754 8427 170 7 115 chrX 153250074 153251206 -13399090 + L1_Mus4 LINE L1 4070 5004 -873 3 1754 1272 89 0 0 chrX 153251206 153251386 -13398910 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 3 1754 8427 127 50 73 chrX 153251386 153252999 -13397297 + L1_Mus4 LINE L1 5005 6629 -7 3 1754 1207 54 0 0 chrX 153253083 153253230 -13397066 + B1_Mus1 SINE Alu 2 148 0 3 1754 24 32 0 0 chrX 153253474 153253505 -13396791 + AT_rich Low_complexity Low_complexity 1 31 0 3 1754 428 159 99 36 chrX 153253565 153253676 -13396620 - Lx2 LINE L1 -2 6995 6878 3 1754 2350 201 39 35 chrX 153253681 153254227 -13396069 + L1VL4 LINE L1 216 763 -5539 3 1754 368 332 101 44 chrX 153254535 153254922 -13395374 + L1M5 LINE L1 5260 5668 -505 3 1754 634 157 0 6 chrX 153255087 153255214 -13395082 - Lx LINE L1 -354 6300 6208 3 1754 310 311 11 73 chrX 153255570 153255761 -13394535 - MT2A LTR ERVL -1 532 354 3 1754 21 100 0 0 chrX 153255817 153255887 -13394409 + AT_rich Low_complexity Low_complexity 1 70 0 3 1754 943 194 35 18 chrX 153255919 153256145 -13394151 - RCHARR1 DNA MER1_type -11 963 734 3 1754 1489 279 26 32 chrX 153256307 153256806 -13393490 - RCHARR1 DNA MER1_type -211 763 268 3 1754 2308 94 32 9 chrX 153257743 153258087 -13392209 + Lx LINE L1 6303 6654 0 3 1754 518 271 65 48 chrX 153258100 153258286 -13392010 + B3A SINE B2 1 189 -9 3 1754 315 383 74 65 chrX 153258307 153258522 -13391774 - MER90 LTR ERV1 0 575 359 3 1754 910 286 63 38 chrX 153259178 153259577 -13390719 + Charlie20a DNA Charlie 318 726 -81 3 1754 3641 59 0 15 chrX 153259854 153260316 -13389980 - L1_Mus1 LINE L1 0 6567 6113 3 1754 207 0 0 0 chrX 153261552 153261575 -13388721 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 1754 1059 90 7 0 chrX 153261575 153261720 -13388576 - B1_Mus2 SINE Alu 0 147 2 3 1754 3605 67 0 42 chrX 153261787 153262287 -13388009 - L1Md_F2 LINE L1 -19 6563 6085 3 1754 371 327 65 36 chrX 153262287 153262563 -13387733 - L1MA5 LINE L1 -474 5826 5543 3 1754 336 258 34 0 chrX 153262585 153262674 -13387622 - Lx9 LINE L1 -166 7478 7387 3 1754 541 184 8 46 chrX 153262684 153262815 -13387481 + Lx9 LINE L1 7508 7633 -11 3 1754 279 0 0 0 chrX 153262877 153262908 -13387388 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 1754 327 330 103 5 chrX 153262993 153263206 -13387090 - L1M5 LINE L1 -1867 4279 4046 3 1754 482 272 204 17 chrX 153263360 153263532 -13386764 - B3 SINE B2 -6 210 7 3 1754 3503 157 104 6 chrX 153263633 153263945 -13386351 + RMER6D LTR ERVK 1 350 -370 3 1754 750 23 0 0 chrX 153263945 153264033 -13386263 + (GA)n Simple_repeat Simple_repeat 1 88 0 3 1754 3503 157 104 6 chrX 153264033 153264362 -13385934 + RMER6D LTR ERVK 351 705 -15 3 1754 279 327 29 10 chrX 153264525 153264627 -13385669 + MIR SINE MIR 48 151 -57 3 1754 238 211 27 113 chrX 153264726 153264808 -13385488 + RMER17D2 LTR ERVK 405 482 -327 3 1754 318 67 0 0 chrX 153264808 153264853 -13385443 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1754 238 211 27 113 chrX 153264853 153264920 -13385376 + RMER17D2 LTR ERVK 483 541 -268 3 1754 188 385 42 0 chrX 153266156 153266252 -13384044 - MER5A DNA MER1_type -48 141 42 3 1754 339 349 180 16 chrX 153266704 153267027 -13383269 - L3 LINE CR1 -14 4475 4100 3 1754 2706 72 3 0 chrX 153269037 153269382 -13380914 - L1_Mm LINE L1 -58 5825 5480 3 1754 1345 100 5 0 chrX 153269374 153269564 -13380732 + L1_Mm LINE L1 4563 4753 -1130 3 1754 250 253 43 65 chrX 153270678 153270771 -13379525 + ORR1E LTR MaLR 3 93 -266 3 1754 317 313 76 82 chrX 153270805 153271115 -13379181 + ORR1D1 LTR MaLR 11 361 -13 3 1754 3225 191 67 38 chrX 153271454 153272485 -13377811 + L1Md_F LINE L1 121 1108 -5433 3 1754 7311 68 6 16 chrX 153272485 153273862 -13376434 + L1_Mus2 LINE L1 202 1446 -4440 3 1754 828 0 0 0 chrX 153273862 153273954 -13376342 + (GAA)n Simple_repeat Simple_repeat 2 93 0 3 1754 6059 101 13 5 chrX 153273954 153274566 -13375730 + L1_Mus2 LINE L1 5945 6566 -3 3 1754 21 0 0 0 chrX 153274641 153274662 -13375634 + AT_rich Low_complexity Low_complexity 1 21 0 3 1754 331 245 10 19 chrX 153274815 153274919 -13375377 + Lx7 LINE L1 7594 7696 0 3 1754 353 123 0 0 chrX 153275105 153275162 -13375134 + U2 snRNA snRNA 1 57 -131 3 1754 1891 199 103 20 chrX 153275186 153275633 -13374663 + RMER1B Other Other 574 1057 -9 3 1754 22 0 0 0 chrX 153277859 153277881 -13372415 + AT_rich Low_complexity Low_complexity 1 22 0 3 1754 2293 214 75 60 chrX 153278949 153279760 -13370536 - L1_Rod LINE L1 -1907 3940 3118 3 1754 407 190 75 80 chrX 153279819 153280019 -13370277 - L1_Rod LINE L1 -3118 2729 2531 3 1754 22 35 0 0 chrX 153280087 153280116 -13370180 + AT_rich Low_complexity Low_complexity 1 29 0 3 1754 27 0 0 0 chrX 153280202 153280229 -13370067 + AT_rich Low_complexity Low_complexity 1 27 0 3 1754 312 301 75 35 chrX 153280315 153280662 -13369634 - L1M4 LINE L1 -1391 4755 4395 3 1754 1043 68 129 0 chrX 153280698 153280845 -13369451 - B2_Mm2 SINE B2 -29 166 1 3 1754 23 0 0 0 chrX 153280849 153280872 -13369424 + AT_rich Low_complexity Low_complexity 1 23 0 3 1754 213 262 0 0 chrX 153281185 153281227 -13369069 - ID4_ SINE ID -2 81 40 3 1754 856 280 118 122 chrX 153281258 153281922 -13368374 - RLTR22_Mur LTR ERVK -274 1574 799 3 1754 1542 262 65 134 chrX 153281942 153282200 -13368096 - RLTR22_Mur LTR ERVK -1047 801 579 3 1754 3536 41 5 5 chrX 153282200 153282641 -13367655 - L1Md_F3 LINE L1 0 6584 6144 3 1754 1542 262 65 134 chrX 153282641 153283242 -13367054 - RLTR22_Mur LTR ERVK -1270 578 1 3 1754 422 196 104 42 chrX 153283568 153283712 -13366584 + Lx4B LINE L1 6900 7052 -6 3 1754 577 92 10 10 chrX 153283786 153283885 -13366411 + (TA)n Simple_repeat Simple_repeat 2 100 0 3 1754 402 232 174 0 chrX 153284305 153284495 -13365801 - Lx9 LINE L1 -1 7643 7421 3 1754 1571 194 70 25 chrX 153284506 153284861 -13365435 + Lx5 LINE L1 6677 7047 -3 3 1754 261 346 13 13 chrX 153284897 153284976 -13365320 + RSINE1 SINE B4 85 163 -2 3 1754 202 154 0 25 chrX 153284976 153285016 -13365280 + (TAAA)n Simple_repeat Simple_repeat 4 42 0 3 1754 954 136 0 0 chrX 153285227 153285382 -13364914 + (GAA)n Simple_repeat Simple_repeat 2 156 0 3 1754 6323 121 27 10 chrX 153285387 153287045 -13363251 + Lx4A LINE L1 4946 6639 -419 3 1754 455 141 0 11 chrX 153287052 153287145 -13363151 + Lx4A LINE L1 6964 7055 -3 3 1754 192 167 0 0 chrX 153288136 153288166 -13362130 + L4 LINE RTE 519 548 -1481 3 1754 1454 233 53 25 chrX 153288502 153288662 -13361634 + ORR1D1 LTR MaLR 1 164 -210 3 1754 423 0 0 0 chrX 153288662 153288709 -13361587 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 1754 1454 233 53 25 chrX 153288709 153288904 -13361392 + ORR1D1 LTR MaLR 165 366 -8 3 1754 1967 143 175 10 chrX 153290129 153290517 -13359779 - L1Md_F2 LINE L1 -1 6581 6130 3 1754 7838 112 14 43 chrX 153290517 153290796 -13359500 - L1Md_F LINE L1 -3382 2501 2262 3 1754 3272 99 4 2 chrX 153290796 153291260 -13359036 - L1_Mus2 LINE L1 0 6566 6102 3 1754 7838 112 14 43 chrX 153291260 153292234 -13358062 - L1Md_F LINE L1 -3622 2261 1286 3 1754 5698 17 0 0 chrX 153292234 153292883 -13357413 - L1Md_A LINE L1 -1 6581 5933 3 1754 7838 126 19 7 chrX 153292883 153293390 -13356906 - L1Md_F LINE L1 -4598 1285 770 3 1754 1220 216 31 8 chrX 153293385 153293642 -13356654 + Lx5 LINE L1 6728 6990 -60 3 1754 5832 80 16 24 chrX 153293657 153294475 -13355821 + L1_Mus2 LINE L1 5756 6566 0 3 1754 342 271 48 63 chrX 153295129 153295200 -13355096 - MER3 DNA MER1_type -1 208 139 3 1754 2824 44 2 132 chrX 153295200 153295646 -13354650 - RLTR10 LTR ERVK -2 388 1 3 1754 342 271 48 63 chrX 153295646 153295700 -13354596 - MER3 DNA MER1_type -71 138 85 3 1754 1251 270 73 15 chrX 153295715 153296252 -13354044 + L1M2 LINE L1 4158 4725 -1418 3 1754 7457 128 28 9 chrX 153296285 153297659 -13352637 - Lx2B LINE L1 -236 6764 5375 3 1754 15934 173 18 20 chrX 153297668 153301424 -13348872 - Lx2B LINE L1 -1551 4335 596 3 1754 936 259 105 55 chrX 153301445 153302073 -13348223 + L1M2 LINE L1 5087 5754 -537 3 1754 1118 305 4 16 chrX 153302095 153302485 -13347811 + Lx6 LINE L1 6487 7249 -211 3 1754 385 286 103 98 chrX 153302725 153302919 -13347377 + B3A SINE B2 3 197 -1 3 1754 32953 77 0 17 chrX 153303229 153308430 -13341866 + L1Md_F2 LINE L1 478 5586 -297 3 1754 7955 53 2 1 chrX 153308430 153309415 -13340881 + L1Md_F2 LINE L1 5587 6572 -10 3 1754 470 291 23 28 chrX 153309937 153310114 -13340182 - L1MB7 LINE L1 -13 6171 5996 3 1754 310 284 0 0 chrX 153310271 153310345 -13339951 - Lx8 LINE L1 -519 6954 6881 3 1754 339 159 22 22 chrX 153310566 153310656 -13339640 + GA-rich Low_complexity Low_complexity 3 92 0 3 1754 206 338 0 0 chrX 153312646 153312726 -13337570 + L2a LINE L2 3291 3421 -5 3 1754 576 77 0 0 chrX 153312876 153312954 -13337342 + (CA)n Simple_repeat Simple_repeat 1 78 0 4 1754 3680 95 14 8 chrX 153313029 153313620 -13336676 - Lx2 LINE L1 -876 6121 5528 4 1754 5153 134 22 12 chrX 153313626 153314473 -13335823 + Lx2 LINE L1 6141 6996 -1 4 1754 707 333 10 0 chrX 153315683 153315881 -13334415 + ID_B1 SINE B4 1 200 -24 4 1754 629 326 125 19 chrX 153315896 153316215 -13334081 + Lx8 LINE L1 6962 7314 -159 4 1754 293 209 135 34 chrX 153316416 153316505 -13333791 + Lx8 LINE L1 7046 7143 -330 4 1754 1132 126 40 0 chrX 153317086 153317284 -13333012 - Lx LINE L1 -4 6650 6445 4 1754 297 75 0 0 chrX 153317448 153317488 -13332808 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 4 1754 3455 214 103 20 chrX 153317504 153318296 -13332000 - Lx5 LINE L1 -43 7007 6150 4 1754 660 244 31 6 chrX 153318332 153318493 -13331803 - RMER30 DNA MER1_type -31 171 7 4 1754 282 256 219 29 chrX 153318884 153319021 -13331275 + RLTR17 LTR ERVK 530 692 0 4 1754 975 236 140 46 chrX 153319021 153319457 -13330839 + RMER3D-int LTR ERVK 1 477 -2365 4 1754 285 211 65 28 chrX 153319575 153319682 -13330614 + L1ME3A LINE L1 6036 6146 -27 4 1754 300 53 0 0 chrX 153319751 153319789 -13330507 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 4 1754 572 171 248 18 chrX 153319791 153319904 -13330392 - B1_Mur4 SINE Alu -11 139 1 4 1754 1747 244 143 10 chrX 153319968 153320452 -13329844 + RMER15 LTR ERVL 28 575 0 4 1754 3065 66 2 8 chrX 153321676 153322074 -13328222 + MTA_Mm LTR MaLR 1 396 0 4 1754 261 0 0 0 chrX 153322171 153322200 -13328096 + (TC)n Simple_repeat Simple_repeat 2 30 0 4 1754 315 0 0 0 chrX 153322200 153322234 -13328062 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1754 1152 160 33 28 chrX 153322676 153322977 -13327319 + ORR1B2 LTR MaLR 1 347 -20 4 1754 21 0 0 0 chrX 153322984 153323005 -13327291 + AT_rich Low_complexity Low_complexity 1 21 0 4 1754 217 380 37 9 chrX 153324775 153324884 -13325412 + MIR3 SINE MIR 76 187 -21 4 1754 5552 78 5 4 chrX 153325109 153325866 -13324430 - L1_Mus3 LINE L1 0 6638 5881 4 1754 1954 61 0 0 chrX 153325866 153326112 -13324184 + L1_Mus3 LINE L1 5621 5866 -772 4 1754 480 385 58 11 chrX 153326527 153326787 -13323509 - LTR33 LTR ERVL -235 280 9 4 1754 1971 56 0 89 chrX 153327061 153327353 -13322943 + L1_Mus2 LINE L1 6301 6566 0 4 1754 407 179 12 0 chrX 153329521 153329605 -13320691 + Lx7 LINE L1 7595 7679 -17 4 1754 225 0 0 0 chrX 153329605 153329630 -13320666 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 4 1754 294 397 65 67 chrX 153329882 153330360 -13319936 - LTR16C LTR ERVL -12 477 1 4 1754 478 322 65 7 chrX 153330396 153330549 -13319747 + B4 SINE B4 68 229 -63 4 1754 1682 72 0 0 chrX 153330549 153330772 -13319524 + L1Md_T LINE L1 6360 6582 0 4 1754 653 276 94 155 chrX 153330785 153330963 -13319333 + Lx8 LINE L1 7003 7170 -303 4 1754 1151 62 0 27 chrX 153330963 153331113 -13319183 - B1_Mus2 SINE Alu -1 146 1 4 1754 653 276 94 155 chrX 153331113 153331372 -13318924 + Lx8 LINE L1 7171 7413 -60 4 1754 527 94 35 0 chrX 153331376 153331461 -13318835 + (GGGAGA)n Simple_repeat Simple_repeat 5 92 0 4 1754 353 334 49 28 chrX 153331634 153331831 -13318465 - MIRm SINE MIR -13 195 2 4 1754 5662 140 45 18 chrX 153332686 153333224 -13317072 - MERVL_2A-int LTR ERVL -4247 1514 968 4 1754 387 0 0 0 chrX 153333224 153333267 -13317029 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1754 1052 109 0 0 chrX 153333267 153333405 -13316891 - B1_Mus1 SINE Alu -9 139 2 4 1754 5662 140 45 18 chrX 153333405 153333816 -13316480 - MERVL_2A-int LTR ERVL -4794 967 541 4 1754 624 213 16 0 chrX 153333816 153333938 -13316358 + RMER4B LTR ERVK 93 216 -369 4 1754 1254 171 85 8 chrX 153333939 153334186 -13316110 - MERVL_2A-int LTR ERVL -5243 518 253 4 1754 524 196 49 0 chrX 153334187 153334274 -13316022 - MT2B LTR ERVL -77 524 433 4 1754 2302 195 81 59 chrX 153334274 153334831 -13315465 - RMER4B LTR ERVK 0 585 17 4 1754 1136 214 206 62 chrX 153334841 153335225 -13315071 - MT2B LTR ERVL -162 439 1 4 1754 1268 272 24 12 chrX 153335227 153335558 -13314738 + MTD LTR MaLR 77 411 -8 4 1754 253 240 0 0 chrX 153335569 153335619 -13314677 - MTE2b LTR MaLR -329 50 1 4 1754 381 43 0 0 chrX 153336076 153336123 -13314173 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 1754 21 0 0 0 chrX 153336716 153336737 -13313559 + AT_rich Low_complexity Low_complexity 1 21 0 4 1754 243 243 50 75 chrX 153337974 153338054 -13312242 + Lx6 LINE L1 7122 7199 -261 4 1754 543 247 103 0 chrX 153338065 153338239 -13312057 + Lx6 LINE L1 7262 7453 -7 4 1754 21 71 0 0 chrX 153338311 153338353 -13311943 + AT_rich Low_complexity Low_complexity 1 42 0 4 1754 231 36 0 0 chrX 153338950 153338978 -13311318 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1754 488 295 16 39 chrX 153339353 153339480 -13310816 - ID_B1 SINE B4 -98 126 3 4 1754 1822 159 12 18 chrX 153340805 153341108 -13309188 + RMER17B LTR ERVK 1 305 -653 4 1754 998 69 7 0 chrX 153341108 153341252 -13309044 + (TC)n Simple_repeat Simple_repeat 1 145 0 4 1754 1822 159 12 18 chrX 153341252 153341274 -13309022 + RMER17B LTR ERVK 306 323 -635 4 1754 2270 199 55 14 chrX 153341254 153341748 -13308548 + RMER17B LTR ERVK 433 946 -12 4 1754 4357 215 32 58 chrX 153343023 153343991 -13306305 + Lx9 LINE L1 6570 7517 -127 4 1754 198 0 0 0 chrX 153343991 153344013 -13306283 + (GA)n Simple_repeat Simple_repeat 2 23 0 4 1754 4357 215 32 58 chrX 153344013 153344139 -13306157 + Lx9 LINE L1 7518 7635 -9 4 1754 259 231 64 0 chrX 153344282 153344360 -13305936 - Lx9 LINE L1 -8 7636 7554 4 1754 1553 186 28 19 chrX 153344360 153344683 -13305613 + Lx9 LINE L1 7121 7446 -198 4 1754 434 339 45 103 chrX 153344882 153345125 -13305171 - MLT1E3 LTR MaLR -8 616 388 4 1754 735 27 36 0 chrX 153345756 153345867 -13304429 + L1Md_F3 LINE L1 6470 6584 0 4 1754 195 129 0 0 chrX 153345882 153345913 -13304383 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1754 277 253 73 67 chrX 153346297 153346475 -13303821 + L1MA9 LINE L1 6101 6279 -33 4 1754 456 384 115 20 chrX 153347847 153348256 -13302040 - LTR16C LTR ERVL -33 456 9 4 1754 339 25 0 0 chrX 153348568 153348608 -13301688 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 1754 370 308 78 57 chrX 153348622 153348815 -13301481 - MIR SINE MIR -55 207 11 4 1754 1309 102 16 0 chrX 153350866 153351052 -13299244 - B2_Mm2 SINE B2 -6 189 1 4 1754 544 294 38 27 chrX 153351511 153351696 -13298600 - B3 SINE B2 -4 212 26 4 1754 261 376 42 17 chrX 153351945 153352064 -13298232 + MIRb SINE MIR 79 200 -68 4 1754 195 273 143 57 chrX 153352305 153352410 -13297886 - L2a LINE L2 -10 3416 3303 4 1754 246 293 0 0 chrX 153352729 153352811 -13297485 + A-rich Low_complexity Low_complexity 1 82 0 4 1754 1160 65 0 0 chrX 153352818 153352973 -13297323 + L1Md_F2 LINE L1 6416 6570 -12 4 1754 508 292 54 55 chrX 153353019 153353284 -13297012 - Lx7 LINE L1 -333 7363 7113 4 1754 414 0 0 0 chrX 153353284 153353330 -13296966 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1754 1362 206 36 4 chrX 153353330 153353607 -13296689 + Lx7 LINE L1 6800 7085 -611 4 1754 490 168 208 0 chrX 153353799 153353900 -13296396 - B1_Mur1 SINE Alu -21 128 7 4 1754 198 0 0 0 chrX 153353951 153353973 -13296323 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 4 1754 24 77 0 0 chrX 153354032 153354084 -13296212 + AT_rich Low_complexity Low_complexity 1 52 0 4 1755 200 43 87 0 chrX 153354656 153354702 -13295594 + (TC)n Simple_repeat Simple_repeat 2 51 0 4 1755 450 0 0 0 chrX 153354704 153354754 -13295542 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1755 2048 157 38 18 chrX 153355258 153355653 -13294643 + Lx4B LINE L1 6649 7051 -7 4 1755 234 91 0 0 chrX 153355663 153355696 -13294600 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 1755 2134 184 34 2 chrX 153355895 153356303 -13293993 + MTC LTR MaLR 1 421 0 4 1755 495 33 0 0 chrX 153356871 153356932 -13293364 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 1755 324 0 0 0 chrX 153356932 153356967 -13293329 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 1755 612 244 80 43 chrX 153357222 153357363 -13292933 + B3 SINE B2 46 195 -21 4 1755 267 31 0 0 chrX 153357363 153357395 -13292901 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1755 612 244 80 43 chrX 153357395 153357416 -13292880 + B3 SINE B2 196 214 -2 4 1755 510 340 55 43 chrX 153357426 153357894 -13292402 - MLT1G1 LTR MaLR -6 573 1 4 1755 233 228 41 52 chrX 153358196 153358293 -13292003 - Lx9 LINE L1 -1 7643 7548 4 1755 263 331 215 17 chrX 153358888 153359060 -13291236 + RMER15 LTR ERVL 357 562 -13 4 1755 337 364 51 11 chrX 153359201 153359248 -13291048 + MLT1G1 LTR MaLR 16 64 -515 4 1755 369 0 0 0 chrX 153359248 153359289 -13291007 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 4 1755 337 364 51 11 chrX 153359289 153359416 -13290880 + MLT1G1 LTR MaLR 65 196 -383 4 1755 420 242 96 19 chrX 153359445 153359601 -13290695 - Lx3C LINE L1 -4 6972 6805 4 1755 1247 41 0 0 chrX 153359930 153360077 -13290219 + B1_Mm SINE Alu 1 147 0 4 1755 236 256 26 0 chrX 153360405 153360483 -13289813 + L1MCa LINE L1 977 1056 -5452 4 1755 306 0 0 0 chrX 153360492 153360526 -13289770 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 1755 1266 90 0 0 chrX 153360531 153360709 -13289587 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 4 1755 232 258 19 97 chrX 153360719 153360822 -13289474 + L1MCa LINE L1 1048 1142 -5366 4 1755 279 236 18 0 chrX 153361462 153361517 -13288779 - MER33 DNA MER1_type -264 60 5 4 1755 577 239 27 55 chrX 153361529 153361675 -13288621 + MER5A1 DNA MER1_type 25 166 0 4 1755 1165 62 7 0 chrX 153361907 153362053 -13288243 + B1_Mus1 SINE Alu 2 148 0 4 1755 456 278 81 54 chrX 153363523 153363709 -13286587 + B3A SINE B2 1 191 -7 4 1755 310 218 83 61 chrX 153363729 153363861 -13286435 + MER5B DNA MER1_type 29 163 -15 4 1755 451 252 101 0 chrX 153363912 153364051 -13286245 + L1M2 LINE L1 2450 2602 -3541 4 1755 296 279 25 0 chrX 153364135 153364214 -13286082 - ID4_ SINE ID -1 82 2 4 1755 331 288 30 53 chrX 153364323 153364455 -13285841 + L1M2 LINE L1 2820 2948 -3195 4 1755 515 310 9 0 chrX 153364465 153364581 -13285715 + B4A SINE B4 2 118 -174 4 1755 312 70 0 0 chrX 153364581 153364624 -13285672 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1755 2645 82 13 3 chrX 153364749 153365127 -13285169 - L1_Mus3 LINE L1 -6 6632 6251 4 1755 3232 118 70 1 chrX 153365127 153365878 -13284418 + L1_Mus3 LINE L1 5789 6292 -362 4 1755 461 250 63 11 chrX 153365974 153366261 -13284035 + L1M2 LINE L1 3051 3352 -2791 4 1755 180 0 0 0 chrX 153366263 153366283 -13284013 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1755 35373 35 0 0 chrX 153366288 153371951 -13278345 + L1Md_T LINE L1 1 5589 -297 5 1755 8857 5 0 3 chrX 153371951 153372940 -13277356 + L1Md_T LINE L1 5590 6575 -10 5 1755 198 0 0 0 chrX 153372991 153373013 -13277283 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1755 338 295 68 59 chrX 153373045 153373265 -13277031 - MYSERV16_I-int LTR ERVK -1753 573 352 5 1755 1155 110 112 24 chrX 153373301 153373506 -13276790 - Lx2 LINE L1 0 6997 6775 5 1755 1606 117 0 0 chrX 153373506 153373729 -13276567 - Lx2 LINE L1 -354 6643 6421 5 1755 2342 255 81 26 chrX 153373734 153373935 -13276361 - MYSERV-int LTR ERVK -1902 4648 4440 5 1755 2278 121 33 153 chrX 153373935 153374483 -13275813 - RLTR45 LTR ERVK 0 482 1 5 1755 2342 255 81 26 chrX 153374483 153375111 -13275185 - MYSERV-int LTR ERVK -2111 4439 3775 5 1755 757 208 84 18 chrX 153376475 153376700 -13273596 - RLTR15 LTR ERVK -118 241 2 5 1755 266 333 0 0 chrX 153376803 153376869 -13273427 + ID4_ SINE ID 5 70 -13 5 1755 7709 80 17 4 chrX 153376921 153378447 -13271849 - L1Md_F2 LINE L1 0 6582 5034 5 1755 200 355 0 22 chrX 153378448 153378540 -13271756 - MIR SINE MIR -80 182 93 5 1755 2119 212 136 7 chrX 153379185 153379735 -13270561 - Lx9 LINE L1 -2 7642 7022 5 1755 264 306 97 18 chrX 153379768 153379881 -13270415 - MLT1D LTR MaLR -363 142 21 5 1755 21 0 0 0 chrX 153380071 153380092 -13270204 + AT_rich Low_complexity Low_complexity 1 21 0 5 1755 609 14 0 0 chrX 153380318 153380388 -13269908 + (GA)n Simple_repeat Simple_repeat 1 70 0 5 1755 252 122 0 0 chrX 153380646 153380687 -13269609 + (T)n Simple_repeat Simple_repeat 1 41 0 5 1755 261 330 19 0 chrX 153380807 153380913 -13269383 + MLT1B LTR MaLR 178 285 -105 5 1755 1421 37 95 11 chrX 153380924 153381113 -13269183 + L1_Mm LINE L1 5404 5608 -275 5 1755 430 331 53 8 chrX 153381751 153381882 -13268414 + MER58A DNA MER1_type 12 148 -76 5 1755 215 295 24 71 chrX 153381916 153382000 -13268296 - ID4_ SINE ID 0 83 4 5 1755 231 340 10 30 chrX 153382049 153382149 -13268147 - Lx8 LINE L1 -1185 6288 6191 5 1755 532 282 0 39 chrX 153382259 153382440 -13267856 - L1M2 LINE L1 -1200 4943 4770 5 1755 289 269 15 0 chrX 153382587 153382654 -13267642 + ID4_ SINE ID 6 73 -10 5 1755 1235 285 153 26 chrX 153382727 153383587 -13266709 - L1M2 LINE L1 -1767 4376 3407 5 1755 207 0 0 0 chrX 153383609 153383632 -13266664 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1755 37957 30 0 0 chrX 153383653 153390038 -13260258 - L1Md_T LINE L1 -12 6573 92 5 1755 832 297 8 25 chrX 153390039 153390284 -13260012 + MYSERV6-int LTR ERVK 4853 5093 -1457 5 1755 487 301 87 11 chrX 153390288 153390473 -13259823 + RMER4A LTR ERVK 240 438 -28 5 1755 1672 166 126 24 chrX 153390474 153390888 -13259408 + MYSERV6-int LTR ERVK 5304 5759 -791 5 1755 403 75 0 0 chrX 153390888 153390941 -13259355 - Lx2A LINE L1 -403 6605 6553 5 1755 5049 112 14 28 chrX 153390939 153391700 -13258596 + Lx2A LINE L1 6222 6976 -32 5 1755 454 95 0 13 chrX 153391700 153391775 -13258521 + Lx2A LINE L1 6930 7003 -5 5 1755 5049 112 14 28 chrX 153391775 153391792 -13258504 + Lx2A LINE L1 6977 6989 -19 5 1755 3471 184 16 21 chrX 153391792 153392557 -13257739 + MYSERV6-int LTR ERVK 8233 8903 -56 5 1755 545 265 125 42 chrX 153392565 153392829 -13257467 + RLTR15 LTR ERVK 1 286 -73 5 1755 314 250 15 0 chrX 153393214 153393282 -13257014 + ID4 SINE ID 14 82 -1 5 1755 321 340 36 20 chrX 153393312 153393507 -13256789 + L1MCb LINE L1 3 200 -5845 5 1755 1302 90 5 36 chrX 153393598 153393794 -13256502 - MT2C_Mm LTR ERVL 0 475 286 5 1755 493 178 17 0 chrX 153393817 153393935 -13256361 + GA-rich Low_complexity Low_complexity 1 120 0 5 1755 2139 98 23 3 chrX 153393935 153394243 -13256053 - MT2C_Mm LTR ERVL -161 314 1 5 1755 297 368 15 73 chrX 153394406 153394814 -13255482 + L1MCb LINE L1 522 905 -5140 5 1755 645 137 281 0 chrX 153394818 153394957 -13255339 - URR1A DNA MER1_type 0 226 49 5 1755 294 29 0 0 chrX 153395158 153395193 -13255103 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 1755 438 256 50 11 chrX 153395193 153395394 -13254902 + L1MCb LINE L1 1013 1307 -5444 5 1755 324 260 47 57 chrX 153395439 153395545 -13254751 + B3A SINE B2 4 108 -90 5 1755 5737 84 21 5 chrX 153395618 153396423 -13253873 + L1VL2 LINE L1 206 1023 -5312 5 1755 684 257 238 15 chrX 153396492 153396757 -13253539 + L1MC3 LINE L1 7097 7420 -365 5 1755 327 279 162 43 chrX 153396831 153397041 -13253255 + HAL1-3A_ME LINE L1 2271 2505 -353 5 1755 429 295 56 10 chrX 153397109 153397304 -13252992 + L1MC3 LINE L1 7471 7674 -111 5 1755 643 141 93 36 chrX 153397836 153397976 -13252320 + B1_Mus1 SINE Alu 1 148 0 5 1755 563 226 34 17 chrX 153398005 153398122 -13252174 + B1_Mur4 SINE Alu 3 121 -29 5 1755 459 0 0 0 chrX 153398126 153398177 -13252119 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 1755 1823 109 11 4 chrX 153398190 153398467 -13251829 - L1_Mus3 LINE L1 -5 6633 6355 5 1755 5270 102 15 0 chrX 153398467 153399214 -13251082 + L1_Mm LINE L1 4812 5569 -314 5 1755 198 0 0 0 chrX 153399259 153399281 -13251015 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 5 1755 2757 151 86 16 chrX 153399400 153399947 -13250349 - RMER4B LTR ERVK 0 585 1 5 1755 630 109 0 0 chrX 153399975 153400076 -13250220 + (CTTG)n Simple_repeat Simple_repeat 2 102 0 5 1755 519 265 17 17 chrX 153400076 153400184 -13250112 - PB1D7 SINE Alu -10 110 1 5 1755 29 0 0 0 chrX 153400757 153400786 -13249510 + AT_rich Low_complexity Low_complexity 1 29 0 5 1755 7830 56 1 6 chrX 153400981 153402265 -13248031 - L1Md_F2 LINE L1 -12 6570 5294 5 1755 1659 34 5 0 chrX 153402265 153402471 -13247825 - L1Md_F2 LINE L1 0 6582 6376 5 1755 1460 18 0 0 chrX 153402471 153402640 -13247656 + L1Md_F2 LINE L1 5740 5908 -674 5 1755 910 78 0 8 chrX 153402633 153402763 -13247533 - L1Md_F2 LINE L1 -581 5302 5174 5 1755 2079 208 54 54 chrX 153402763 153403282 -13247014 - RMER5 LTR ERV1 -15 519 1 5 1755 194 319 29 0 chrX 153405043 153405112 -13245184 + MER5A DNA MER1_type 119 189 0 5 1755 298 267 71 41 chrX 153405456 153405710 -13244586 + L1_Mur3 LINE L1 3004 3256 -2624 5 1755 3892 93 9 0 chrX 153405710 153406246 -13244050 - L1_Mus3 LINE L1 0 6638 6098 5 1755 2012 296 38 18 chrX 153406246 153407158 -13243138 + L1_Mur3 LINE L1 4112 5042 -838 5 1755 2139 230 73 25 chrX 153407161 153407692 -13242604 + Lx7 LINE L1 6738 7294 -402 5 1755 518 79 0 0 chrX 153407962 153408025 -13242271 - L1_Mus1 LINE L1 -353 6214 6152 5 1755 2421 68 15 3 chrX 153408025 153408351 -13241945 + L1_Mus1 LINE L1 6237 6566 -1 5 1755 21 0 0 31 chrX 153408680 153408700 -13241596 + AT_rich Low_complexity Low_complexity 1 20 0 5 1755 1032 77 0 0 chrX 153408700 153408843 -13241453 - L1Md_F2 LINE L1 -14 6568 6426 5 1755 21 0 0 31 chrX 153408843 153408854 -13241442 + AT_rich Low_complexity Low_complexity 1 11 0 5 1755 394 91 0 0 chrX 153409120 153409175 -13241121 + Lx9 LINE L1 5308 5362 -485 5 1755 1003 244 25 21 chrX 153409175 153409455 -13240841 + Lx9 LINE L1 5695 5975 -1669 5 1755 4757 204 72 13 chrX 153409514 153410015 -13240281 + Lx9 LINE L1 6501 7009 -635 5 1755 531 112 0 0 chrX 153410015 153410095 -13240201 + (CATTA)n Simple_repeat Simple_repeat 3 82 0 5 1755 4757 204 72 13 chrX 153410095 153410667 -13239629 + Lx9 LINE L1 7010 7636 -8 5 1755 533 255 87 38 chrX 153410679 153410944 -13239352 + Lx9 LINE L1 5739 6016 -1628 5 1755 1924 154 0 10 chrX 153411278 153411592 -13238704 + RLTR10E LTR ERVK 1 311 0 5 1755 1313 288 67 16 chrX 153411661 153412049 -13238247 + Lx8 LINE L1 6191 6598 -875 5 1755 311 282 176 17 chrX 153412042 153412095 -13238201 + Lx8 LINE L1 6745 6797 -676 5 1755 333 0 0 0 chrX 153412095 153412132 -13238164 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1755 456 19 0 0 chrX 153412132 153412184 -13238112 + (CATATA)n Simple_repeat Simple_repeat 3 55 0 5 1755 311 282 176 17 chrX 153412184 153412248 -13238048 + Lx8 LINE L1 6798 6881 -592 5 1755 23539 148 42 4 chrX 153412256 153417772 -13232524 + Lx2 LINE L1 923 6645 -352 5 1755 1440 121 9 4 chrX 153417761 153417993 -13232303 + Lx2 LINE L1 6765 6997 0 5 1755 1140 33 0 13 chrX 153418136 153418290 -13232006 + L1Md_F2 LINE L1 6427 6578 -4 5 1755 30 0 0 0 chrX 153418290 153418320 -13231976 + AT_rich Low_complexity Low_complexity 1 30 0 5 1755 432 0 0 0 chrX 153418678 153418726 -13231570 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 1755 343 274 243 45 chrX 153418909 153419131 -13231165 + L2a LINE L2 3153 3418 -8 5 1755 716 147 127 6 chrX 153420291 153420449 -13229847 + RMER4B LTR ERVK 1 177 -408 5 1755 431 284 105 28 chrX 153420461 153420642 -13229654 + RMER4B LTR ERVK 219 413 -172 5 1755 241 262 46 81 chrX 153420651 153420738 -13229558 + RMER19C LTR ERVK 482 565 -46 5 1755 24 0 0 0 chrX 153420833 153420857 -13229439 + AT_rich Low_complexity Low_complexity 1 24 0 5 1755 1300 218 104 0 chrX 153420947 153421245 -13229051 - Lx6 LINE L1 -781 6679 6351 5 1755 268 191 0 0 chrX 153421244 153421291 -13229005 - Lx7 LINE L1 -1374 6322 6276 5 1755 2886 149 77 6 chrX 153421292 153421379 -13228917 - RLTR20D LTR ERVK -2 566 479 5 1755 222 37 0 0 chrX 153421379 153421406 -13228890 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1755 477 0 0 0 chrX 153421408 153421461 -13228835 + (TC)n Simple_repeat Simple_repeat 1 53 0 5 1755 897 19 0 0 chrX 153421461 153421567 -13228729 + (CA)n Simple_repeat Simple_repeat 1 107 0 5 1755 2886 149 77 6 chrX 153421567 153421994 -13228302 - RLTR20D LTR ERVK -90 478 18 5 1755 1115 289 12 25 chrX 153421999 153422318 -13227978 - Lx6 LINE L1 -1190 6270 5956 5 1755 647 304 68 5 chrX 153422330 153422522 -13227774 - B3 SINE B2 -12 204 1 5 1755 23 0 0 0 chrX 153422726 153422749 -13227547 + AT_rich Low_complexity Low_complexity 1 23 0 5 1755 180 330 87 11 chrX 153423825 153423917 -13226379 - MIR SINE MIR -70 138 40 5 1755 582 15 0 0 chrX 153425266 153425333 -13224963 + (TC)n Simple_repeat Simple_repeat 1 67 0 5 1755 2930 174 31 73 chrX 153425334 153426045 -13224251 - Lx4A LINE L1 -122 6928 6194 5 1755 482 245 0 19 chrX 153426082 153426190 -13224106 - PB1D10 SINE Alu -6 111 6 5 1755 234 0 0 0 chrX 153426739 153426765 -13223531 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 1755 220 286 0 23 chrX 153426983 153427069 -13223227 + GA-rich Low_complexity Low_complexity 3 86 0 5 1755 304 347 145 7 chrX 153427614 153427890 -13222406 + L2 LINE L2 2093 2406 -1013 5 1755 671 334 18 52 chrX 153428372 153428662 -13221634 - B4A SINE B4 -2 290 5 5 1755 390 202 91 16 chrX 153429408 153429529 -13220767 - Lx9 LINE L1 -1 7643 7514 5 1755 239 54 27 0 chrX 153429538 153429575 -13220721 + (TATG)n Simple_repeat Simple_repeat 2 39 0 5 1755 364 288 21 14 chrX 153429606 153429747 -13220549 - L1_Mur3 LINE L1 -2252 3628 3487 5 1755 404 178 0 14 chrX 153429756 153429830 -13220466 - Lx9 LINE L1 -216 7428 7356 5 1755 1202 99 0 0 chrX 153430595 153430756 -13219540 + B2_Mm2 SINE B2 1 161 -34 5 1755 246 289 12 0 chrX 153431106 153431189 -13219107 + Lx8 LINE L1 5823 5906 -1567 5 1755 1687 175 59 120 chrX 153431216 153431476 -13218820 - ORR1C2 LTR MaLR 0 384 169 5 1755 446 17 0 33 chrX 153431476 153431536 -13218760 + (CAGAGA)n Simple_repeat Simple_repeat 2 59 0 6 1755 1687 175 59 120 chrX 153431536 153431684 -13218612 - ORR1C2 LTR MaLR -216 168 2 5 1755 351 0 0 0 chrX 153431836 153431875 -13218421 + (TAA)n Simple_repeat Simple_repeat 1 39 0 6 1755 4011 43 0 0 chrX 153432124 153432608 -13217688 - L1Md_A LINE L1 -1 6581 6098 6 1755 408 88 0 0 chrX 153432653 153432710 -13217586 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 1755 309 296 109 81 chrX 153433779 153434062 -13216234 + L1M5 LINE L1 4546 4836 -1310 6 1755 1103 181 58 9 chrX 153434063 153434286 -13216010 + Lx2B LINE L1 6250 6483 -517 6 1755 3315 200 46 45 chrX 153434288 153435273 -13215023 + Lx2B LINE L1 5075 6999 -1 6 1755 993 244 191 20 chrX 153435393 153435749 -13214547 - MTD LTR MaLR 0 419 3 6 1755 1196 174 42 18 chrX 153436376 153436593 -13213703 + URR1B DNA MER1_type 4 225 0 6 1755 2658 57 3 0 chrX 153436611 153436945 -13213351 + L1_Mus1 LINE L1 6233 6567 0 6 1755 21 57 0 0 chrX 153437471 153437506 -13212790 + AT_rich Low_complexity Low_complexity 1 35 0 6 1755 5960 159 72 8 chrX 153437506 153438577 -13211719 - Lx4A LINE L1 -1 7057 5919 6 1755 2479 75 12 6 chrX 153438577 153438912 -13211384 + Lx4A LINE L1 5599 5935 -1123 6 1755 477 0 0 0 chrX 153439384 153439437 -13210859 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1755 25 0 0 0 chrX 153440840 153440865 -13209431 + AT_rich Low_complexity Low_complexity 1 25 0 6 1755 6756 211 66 86 chrX 153443580 153444454 -13205842 + L1_Rod LINE L1 1572 2446 -3401 6 1755 414 0 0 0 chrX 153444454 153444500 -13205796 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1755 6756 211 66 86 chrX 153444500 153444516 -13205780 + L1_Rod LINE L1 2447 2447 -3400 6 1755 773 231 0 0 chrX 153444516 153444663 -13205633 - B1_Mur4 SINE Alu -2 148 2 6 1755 6756 211 66 86 chrX 153444663 153445685 -13204611 + L1_Rod LINE L1 2447 3459 -2388 6 1755 3554 73 0 0 chrX 153445685 153446137 -13204159 + L1_Mus1 LINE L1 6116 6567 0 6 1755 6756 211 66 86 chrX 153446137 153446170 -13204126 + L1_Rod LINE L1 3460 3503 -2344 6 1755 372 43 0 0 chrX 153446170 153446216 -13204080 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 1755 6756 211 66 86 chrX 153446216 153446804 -13203492 + L1_Rod LINE L1 3504 4056 -1791 6 1755 225 345 118 59 chrX 153447423 153447660 -13202636 - MLT1J1 LTR MaLR -189 255 5 6 1755 473 336 112 14 chrX 153447770 153447993 -13202303 + MLT1H LTR MaLR 1 245 -304 6 1755 207 88 0 0 chrX 153448032 153448066 -13202230 + (TTG)n Simple_repeat Simple_repeat 1 34 0 6 1755 474 394 43 66 chrX 153448933 153449371 -13200925 + LTR16B2 LTR ERVL 35 462 0 6 1755 22 56 0 0 chrX 153449504 153449540 -13200756 + AT_rich Low_complexity Low_complexity 1 36 0 6 1755 262 301 11 11 chrX 153449737 153449825 -13200471 + MTEb LTR MaLR 3 85 -294 6 1755 1076 212 30 88 chrX 153452102 153452407 -13197889 + Lx9 LINE L1 6986 7272 -372 6 1755 1126 316 3 0 chrX 153452849 153453134 -13197162 - MTE2b LTR MaLR -4 375 90 6 1755 2548 195 27 23 chrX 153453135 153453650 -13196646 - Lx9 LINE L1 -717 6927 6411 6 1755 775 174 141 0 chrX 153453648 153453832 -13196464 + Lx9 LINE L1 7326 7535 -109 6 1755 332 327 12 6 chrX 153454529 153454689 -13195607 + MER103 DNA DNA 4 164 -2 6 1755 237 33 0 0 chrX 153455164 153455194 -13195102 + (GA)n Simple_repeat Simple_repeat 1 30 0 6 1755 696 145 0 0 chrX 153455307 153455424 -13194872 + (TTC)n Simple_repeat Simple_repeat 1 117 0 6 1755 1130 68 0 14 chrX 153455424 153455572 -13194724 - B1_Mus2 SINE Alu 0 147 2 6 1755 21 100 0 0 chrX 153455805 153455875 -13194421 + AT_rich Low_complexity Low_complexity 1 70 0 6 1755 353 224 86 93 chrX 153456006 153456168 -13194128 - L1MA7 LINE L1 -6 6294 6126 6 1755 378 332 70 80 chrX 153456170 153456383 -13193913 - B3 SINE B2 -5 211 1 6 1755 187 292 76 33 chrX 153456681 153456773 -13193523 - L3b LINE CR1 -283 199 104 6 1755 509 120 0 11 chrX 153457505 153457598 -13192698 + (TATG)n Simple_repeat Simple_repeat 4 95 0 6 1755 23 0 0 0 chrX 153457641 153457664 -13192632 + AT_rich Low_complexity Low_complexity 1 23 0 6 1755 216 0 0 0 chrX 153458084 153458108 -13192188 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6 1755 719 326 107 36 chrX 153458254 153458759 -13191537 + L1MD2 LINE L1 5502 6042 -122 6 1755 258 278 281 13 chrX 153459034 153459151 -13191145 + B3A SINE B2 1 160 -38 6 1755 438 20 0 0 chrX 153459151 153459202 -13191094 + (TC)n Simple_repeat Simple_repeat 1 51 0 6 1755 258 278 281 13 chrX 153459202 153459237 -13191059 + B3A SINE B2 161 193 -5 6 1755 1569 259 98 52 chrX 153459243 153459541 -13190755 + Lx9 LINE L1 6964 7267 -377 6 1755 1719 125 96 86 chrX 153459541 153459865 -13190431 - ORR1A2 LTR MaLR 0 327 1 6 1755 1569 259 98 52 chrX 153459865 153460071 -13190225 + Lx9 LINE L1 7268 7496 -148 6 1755 342 0 0 0 chrX 153460071 153460109 -13190187 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1755 1569 259 98 52 chrX 153460109 153460235 -13190061 + Lx9 LINE L1 7497 7624 -20 6 1755 282 266 121 7 chrX 153460277 153460417 -13189879 + L1MC4a LINE L1 6367 6522 -1360 6 1755 401 277 11 11 chrX 153460552 153460647 -13189649 + PB1D10 SINE Alu 21 115 -2 6 1755 986 178 22 6 chrX 153460767 153460948 -13189348 + Lx7 LINE L1 7184 7367 -329 6 1755 279 93 0 0 chrX 153461051 153461094 -13189202 + (GA)n Simple_repeat Simple_repeat 1 43 0 6 1755 335 299 13 13 chrX 153461094 153461172 -13189124 + MER2B DNA MER2_type 258 335 -1 6 1755 671 255 44 78 chrX 153461204 153461408 -13188888 + B3A SINE B2 1 197 -1 6 1755 919 202 68 4 chrX 153461424 153461658 -13188638 - Lx9 LINE L1 -7 7637 7389 6 1755 393 305 0 9 chrX 153461670 153461776 -13188520 + PB1D10 SINE Alu 1 105 -12 6 1755 392 217 84 15 chrX 153461832 153461963 -13188333 + L1MC4a LINE L1 7344 7483 -399 6 1755 4249 211 46 31 chrX 153461959 153462856 -13187440 + Lx5 LINE L1 6128 7037 -13 6 1755 1644 16 5 5 chrX 153462857 153463050 -13187246 + B2_Mm1a SINE B2 1 193 0 6 1755 349 351 29 0 chrX 153463081 153463255 -13187041 + L1MC4a LINE L1 7480 7658 -224 6 1755 255 61 0 0 chrX 153463426 153463459 -13186837 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 6 1755 349 356 125 22 chrX 153463628 153463852 -13186444 + MLT1G1 LTR MaLR 326 572 -7 6 1755 1234 96 17 11 chrX 153463905 153464085 -13186211 + B2_Mm2 SINE B2 1 181 -14 6 1755 1359 104 0 0 chrX 153464092 153464274 -13186022 + Lx3B LINE L1 6226 6407 -566 6 1755 3301 129 9 46 chrX 153464272 153464834 -13185462 + L1VL2 LINE L1 67 607 -5728 6 1755 4730 31 2 0 chrX 153464824 153465396 -13184900 - L1_Mm LINE L1 -1347 4536 3964 6 1755 847 156 20 20 chrX 153465840 153465990 -13184306 + B1_Mur4 SINE Alu 1 150 0 6 1755 258 225 183 0 chrX 153466002 153466104 -13184192 - L1MA6 LINE L1 -23 6277 6159 6 1755 1058 118 58 6 chrX 153466107 153466278 -13184018 + B2_Mm2 SINE B2 2 181 -14 6 1755 4580 145 59 21 chrX 153466345 153467196 -13183100 - RLTR13D6 LTR ERVK -19 883 1 6 1755 541 275 0 68 chrX 153467398 153467546 -13182750 + B1F SINE Alu 6 143 -6 6 1755 21 0 0 0 chrX 153467567 153467588 -13182708 + AT_rich Low_complexity Low_complexity 1 21 0 6 1755 396 324 7 56 chrX 153467600 153467744 -13182552 - MER5A DNA MER1_type -16 173 37 6 1755 2873 43 3 0 chrX 153468379 153468724 -13181572 + ORR1A1 LTR MaLR 1 346 0 6 1755 276 30 0 0 chrX 153468733 153468766 -13181530 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 6 1755 436 333 56 6 chrX 153469225 153469403 -13180893 + MER20 DNA MER1_type 33 219 0 6 1755 3801 62 4 2 chrX 153471027 153471513 -13178783 + L1_Mus2 LINE L1 6080 6566 0 6 1755 2775 119 52 34 chrX 153471634 153472524 -13177772 + L1VL4 LINE L1 359 1282 -2277 6 1755 356 100 55 41 chrX 153472574 153472647 -13177649 + ETnERV2-int LTR ERVK 7331 7404 -2 6 1755 2035 128 47 12 chrX 153472648 153472987 -13177309 + RLTR9D LTR ERVK 1 351 -52 6 1755 14735 154 53 4 chrX 153472987 153474712 -13175584 + Lx6 LINE L1 1639 3483 -2400 6 1755 186 43 0 0 chrX 153474712 153474735 -13175561 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1755 14735 188 89 48 chrX 153474735 153475780 -13174516 + Lx6 LINE L1 3478 4602 -2858 6 1755 1116 102 13 0 chrX 153475780 153475937 -13174359 + MTB_Mm LTR MaLR 1 159 -248 6 1755 14735 188 89 48 chrX 153475937 153477539 -13172757 + Lx6 LINE L1 4603 6328 -1132 6 1755 429 20 0 0 chrX 153477539 153477589 -13172707 + (TA)n Simple_repeat Simple_repeat 1 50 0 6 1755 3222 265 96 101 chrX 153477589 153478495 -13171801 + Lx6 LINE L1 6329 7315 -145 6 1755 339 89 0 0 chrX 153478498 153478554 -13171742 + (TC)n Simple_repeat Simple_repeat 1 56 0 6 1755 32 0 0 0 chrX 153478661 153478693 -13171603 + AT_rich Low_complexity Low_complexity 1 32 0 6 1755 3270 53 0 2 chrX 153478701 153479119 -13171177 - L1Md_F3 LINE L1 -491 5392 4976 6 1755 1738 25 0 0 chrX 153479133 153479332 -13170964 + L1Md_F3 LINE L1 5387 5585 -298 6 1755 8098 39 3 3 chrX 153479333 153480317 -13169979 + L1Md_F3 LINE L1 5587 6570 -14 6 1755 308 286 98 33 chrX 153480366 153480522 -13169774 + RSINE1 SINE B4 78 292 0 6 1755 540 312 38 38 chrX 153481113 153481273 -13169023 + MER20 DNA MER1_type 3 162 -57 6 1755 465 19 0 0 chrX 153481289 153481343 -13168953 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1755 354 23 0 0 chrX 153481920 153481963 -13168333 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1755 185 345 65 53 chrX 153482116 153482258 -13168038 - L2a LINE L2 -310 3116 2980 6 1755 226 323 10 40 chrX 153482371 153482471 -13167825 + LTR90A LTR LTR 204 300 -676 6 1755 636 125 5 0 chrX 153482846 153482948 -13167348 + Lx2 LINE L1 6555 6644 -353 6 1755 1171 138 73 5 chrX 153482950 153483039 -13167257 + Lx2 LINE L1 6778 6866 -131 6 1755 234 62 0 0 chrX 153483039 153483071 -13167225 + (TGGG)n Simple_repeat Simple_repeat 2 33 0 6 1755 1171 138 73 5 chrX 153483071 153483185 -13167111 + Lx2 LINE L1 6867 6993 -4 6 1755 28 0 0 0 chrX 153483185 153483213 -13167083 + AT_rich Low_complexity Low_complexity 1 28 0 6 1755 7305 50 2 24 chrX 153483452 153484401 -13165895 + L1Md_F2 LINE L1 5651 6578 -4 6 1755 448 312 52 14 chrX 153484898 153485109 -13165187 - MER20 DNA MER1_type 0 219 1 6 1756 525 16 0 0 chrX 153486803 153486865 -13163431 + (GTTTG)n Simple_repeat Simple_repeat 3 64 0 6 1756 244 305 36 54 chrX 153487691 153487802 -13162494 - L2b LINE L2 -308 3067 2959 6 1756 21 36 0 0 chrX 153487820 153487848 -13162448 + AT_rich Low_complexity Low_complexity 1 28 0 6 1756 286 403 42 14 chrX 153487995 153488209 -13162087 - L2b LINE L2 -529 2890 2671 6 1756 577 196 0 51 chrX 153488498 153488616 -13161680 + U1 snRNA snRNA 2 113 -52 6 1756 795 304 55 49 chrX 153488587 153488916 -13161380 - RLTR18 LTR ERVK -4 612 282 6 1756 720 232 56 56 chrX 153489048 153489244 -13161052 - RLTR18 LTR ERVK -312 200 5 6 1756 337 244 0 34 chrX 153489228 153489317 -13160979 + U1 snRNA snRNA 75 160 -5 6 1756 298 294 87 47 chrX 153489819 153489969 -13160327 - MIRb SINE MIR -1 267 112 6 1756 204 125 0 0 chrX 153491122 153491154 -13159142 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 6 1756 260 215 49 37 chrX 153491713 153491795 -13158501 + CT-rich Low_complexity Low_complexity 1 83 0 7 1756 873 104 0 19 chrX 153492271 153492419 -13157877 - Lx2B LINE L1 -1217 5783 5637 7 1756 496 192 85 31 chrX 153492444 153492573 -13157723 + L1_Mus3 LINE L1 668 803 -5813 7 1756 432 82 0 0 chrX 153492613 153492674 -13157622 + (A)n Simple_repeat Simple_repeat 1 61 0 7 1756 349 41 0 0 chrX 153492706 153492755 -13157541 - L1_Mus2 LINE L1 -1 6565 6517 7 1756 1521 72 0 0 chrX 153492755 153492949 -13157347 + L1_Mus2 LINE L1 6050 6243 -323 7 1756 29732 151 9 53 chrX 153492997 153494437 -13155859 + L1_Mus3 LINE L1 667 2033 -3850 7 1756 2091 72 38 0 chrX 153494437 153494728 -13155568 + L1_Mus1 LINE L1 6266 6567 0 7 1756 29732 114 12 7 chrX 153494728 153499340 -13150956 + L1_Mus3 LINE L1 2034 6638 0 7 1756 3801 140 12 21 chrX 153499344 153500000 -13150296 - L1_Mur1 LINE L1 -219 5667 5018 7 1756 3386 137 127 4 chrX 153500015 153500782 -13149514 - L1_Mur1 LINE L1 -866 5017 4054 1 1756 6402 137 59 3 chrX 153500782 153501892 -13148404 + Lx3C LINE L1 5803 6974 -2 2 1756 541 292 37 25 chrX 153501892 153501918 -13148378 - L1_Mur1 LINE L1 -2066 4077 4050 1 1756 21 57 0 0 chrX 153502022 153502057 -13148239 + AT_rich Low_complexity Low_complexity 1 35 0 3 1756 942 183 84 63 chrX 153502266 153502645 -13147651 - Lx7 LINE L1 0 7696 7310 4 1756 200 211 0 0 chrX 153503912 153503950 -13146346 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 5 1756 496 288 58 36 chrX 153503954 153504228 -13146068 + L1MC1 LINE L1 3777 4056 -2090 6 1756 1949 264 88 19 chrX 153504230 153505518 -13144778 + L1MC1 LINE L1 4637 5998 -335 6 1756 1439 115 0 0 chrX 153506499 153506716 -13143580 - Lx2 LINE L1 -6 6991 6775 7 1756 345 326 83 48 chrX 153506916 153507061 -13143235 - MLT1J2 LTR MaLR 0 579 430 8 1756 396 350 128 40 chrX 153507705 153508023 -13142273 - MLT1J2 LTR MaLR -94 350 15 8 1756 336 102 0 0 chrX 153508074 153508123 -13142173 + (CCA)n Simple_repeat Simple_repeat 2 50 0 9 1756 232 266 13 0 chrX 153508141 153508220 -13142076 + (TAAA)n Simple_repeat Simple_repeat 2 81 0 1 1756 352 307 108 14 chrX 153508772 153508911 -13141385 + MER20 DNA MER1_type 68 219 0 1 1756 710 374 55 19 chrX 153509020 153509328 -13140968 - LTR16E2 LTR ERVL -2 566 248 1 1756 279 0 0 0 chrX 153511157 153511188 -13139108 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1756 4021 59 4 2 chrX 153511267 153511779 -13138517 + L1Md_F2 LINE L1 5074 5586 -297 1 1756 7953 51 2 2 chrX 153511780 153512762 -13137534 + L1Md_F2 LINE L1 5588 6569 -13 1 1756 234 0 0 0 chrX 153512766 153512792 -13137504 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1 1756 3819 101 4 4 chrX 153512792 153513355 -13136941 + L1Md_F2 LINE L1 6023 6582 0 1 1756 373 62 15 15 chrX 153513456 153513522 -13136774 + (TTTTG)n Simple_repeat Simple_repeat 2 67 0 1 1756 234 296 0 54 chrX 153513905 153513998 -13136298 + GA-rich Low_complexity Low_complexity 2 89 0 1 1756 3319 28 11 0 chrX 153515481 153515941 -13134355 - L1Md_F2 LINE L1 -597 5985 5521 1 1756 4845 30 18 0 chrX 153515941 153516512 -13133784 + L1Md_F2 LINE L1 5989 6569 -13 1 1756 1520 90 4 22 chrX 153516586 153516814 -13133482 - L1_Mus2 LINE L1 -2 6564 6341 2 1756 887 264 44 4 chrX 153517244 153517495 -13132801 - L1MB1 LINE L1 -16 6173 5913 2 1756 305 319 37 21 chrX 153517732 153517876 -13132420 - MIR SINE MIR -42 226 81 2 1756 282 266 36 18 chrX 153519006 153519117 -13131179 + Lx7 LINE L1 7579 7691 -5 2 1756 3011 248 19 3 chrX 153519209 153519843 -13130453 - Lx5 LINE L1 -144 6906 6263 2 1756 264 30 0 0 chrX 153520886 153520919 -13129377 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1756 223 159 0 43 chrX 153521095 153521141 -13129155 + CT-rich Low_complexity Low_complexity 4 47 0 2 1756 637 326 34 34 chrX 153521765 153522000 -13128296 - LTR16C LTR ERVL 0 489 255 2 1756 460 326 29 0 chrX 153522934 153523072 -13127224 + MIR SINE MIR 89 230 -32 2 1756 298 315 180 19 chrX 153523319 153523575 -13126721 - L2a LINE L2 -21 3405 3109 2 1756 476 277 114 0 chrX 153523872 153524038 -13126258 - L2a LINE L2 -507 2912 2728 2 1756 279 0 0 0 chrX 153524294 153524325 -13125971 + (TC)n Simple_repeat Simple_repeat 2 32 0 3 1756 432 0 0 0 chrX 153524325 153524372 -13125924 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1756 201 191 21 0 chrX 153524668 153524715 -13125581 + GA-rich Low_complexity Low_complexity 1 48 0 3 1756 325 350 38 6 chrX 153525307 153525465 -13124831 + MIR SINE MIR 6 168 -94 3 1756 583 310 67 59 chrX 153525906 153526210 -13124086 - B4 SINE B4 -11 281 5 3 1756 251 262 31 62 chrX 153526205 153526270 -13124026 - PB1D10 SINE Alu -34 83 21 3 1756 21 57 0 0 chrX 153526439 153526474 -13123822 + AT_rich Low_complexity Low_complexity 1 35 0 3 1756 423 0 0 0 chrX 153526504 153526551 -13123745 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 1756 396 200 90 50 chrX 153526573 153526673 -13123623 - B3A SINE B2 -84 114 11 3 1756 524 300 54 110 chrX 153526800 153527208 -13123088 + L1MEg LINE L1 371 755 -5480 3 1756 324 0 0 0 chrX 153527214 153527250 -13123046 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1756 820 296 47 22 chrX 153527314 153527760 -13122536 + L1MEg LINE L1 2340 2796 -4537 3 1756 379 186 20 0 chrX 153527786 153527888 -13122408 + (TA)n Simple_repeat Simple_repeat 1 104 0 4 1756 30 27 0 0 chrX 153527892 153527929 -13122367 + AT_rich Low_complexity Low_complexity 1 37 0 4 1756 286 259 69 75 chrX 153527951 153528256 -13122040 + L1MEg LINE L1 2831 3133 -4200 3 1756 243 288 44 61 chrX 153528323 153528451 -13121845 + L1MEg LINE L1 3344 3477 -3760 3 1756 2442 53 3 0 chrX 153528451 153528755 -13121541 + L1_Mus1 LINE L1 6263 6567 0 4 1756 273 250 28 30 chrX 153528755 153528925 -13121371 + L1MEg LINE L1 3478 3637 -3600 3 1756 1214 180 13 13 chrX 153528982 153529207 -13121089 - Lx3B LINE L1 -3 6970 6746 4 1756 393 22 0 0 chrX 153529704 153529750 -13120546 + (GTTTG)n Simple_repeat Simple_repeat 5 50 0 4 1756 326 303 0 13 chrX 153529767 153529844 -13120452 - B1F1 SINE Alu -73 76 1 4 1756 432 287 95 58 chrX 153530179 153530453 -13119843 + L1MEg LINE L1 429 712 -5372 4 1756 2292 143 11 11 chrX 153531888 153532255 -13118041 - ORR1B2 LTR MaLR 0 367 1 4 1756 450 277 106 20 chrX 153533151 153533302 -13116994 - L1M3e LINE L1 -6723 307 144 4 1756 477 0 0 0 chrX 153533377 153533430 -13116866 + (TA)n Simple_repeat Simple_repeat 1 53 0 5 1756 8542 42 7 52 chrX 153534334 153535004 -13115292 + L1Md_T LINE L1 232 905 -5819 5 1756 2040 36 20 0 chrX 153535004 153535254 -13115042 - L1Md_T LINE L1 -3 6579 6325 5 1756 36888 23 3 4 chrX 153535254 153539981 -13110315 + L1Md_T LINE L1 906 5586 -297 5 1756 8286 41 0 0 chrX 153539981 153540976 -13109320 + L1Md_T LINE L1 5587 6581 -1 5 1756 281 311 53 1 chrX 153541429 153541541 -13108755 + MLT1E LTR MaLR 444 653 0 5 1756 201 288 0 103 chrX 153541782 153541840 -13108456 - MER5A DNA MER1_type -129 60 9 5 1756 26 64 0 0 chrX 153541895 153541942 -13108354 + AT_rich Low_complexity Low_complexity 1 47 0 5 1756 459 0 0 0 chrX 153542173 153542224 -13108072 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 1756 384 22 0 0 chrX 153543044 153543089 -13107207 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1756 5578 81 6 10 chrX 153543262 153544044 -13106252 - L1Md_F2 LINE L1 -4 6578 5800 5 1756 2533 61 0 38 chrX 153544044 153544387 -13105909 - L1Md_F2 LINE L1 -237 5646 5317 5 1756 595 319 148 37 chrX 153544463 153544814 -13105482 + Lx5 LINE L1 6643 7032 -18 5 1756 23 33 0 0 chrX 153544850 153544880 -13105416 + AT_rich Low_complexity Low_complexity 1 30 0 6 1756 788 341 7 17 chrX 153545327 153545616 -13104680 + Lx8 LINE L1 7043 7328 -145 6 1756 5637 155 32 33 chrX 153545619 153546384 -13103912 + L1Md_F LINE L1 93 858 -5661 6 1756 1181 55 7 0 chrX 153546384 153546530 -13103766 + B1_Mus2 SINE Alu 1 147 0 6 1756 5637 155 32 33 chrX 153546530 153546799 -13103497 + L1Md_F LINE L1 859 1126 -5393 6 1756 17613 144 104 59 chrX 153546808 153551888 -13098408 + L1_Mus1 LINE L1 1244 6567 0 6 1756 347 247 268 19 chrX 153552526 153552683 -13097613 - MLT1H LTR MaLR -353 196 1 6 1756 366 360 88 70 chrX 153553176 153553448 -13096848 + B4 SINE B4 2 278 -14 6 1756 234 264 33 33 chrX 153553507 153553597 -13096699 - Lx9 LINE L1 -440 7204 7115 6 1756 468 167 0 10 chrX 153553618 153553721 -13096575 + Lx9 LINE L1 7521 7622 -22 6 1756 25 0 0 0 chrX 153553725 153553750 -13096546 + AT_rich Low_complexity Low_complexity 1 25 0 6 1756 1209 348 167 22 chrX 153553887 153554760 -13095536 + LTR78 LTR ERV1 297 1296 -8 7 1756 216 363 150 12 chrX 153554838 153555011 -13095285 - L2a LINE L2 -214 3212 3016 7 1756 246 208 0 0 chrX 153555022 153555075 -13095221 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 7 1756 201 356 0 40 chrX 153555205 153555281 -13095015 - L2a LINE L2 -599 2820 2748 7 1756 684 267 16 16 chrX 153555666 153555849 -13094447 + B3A SINE B2 1 183 -15 7 1756 482 307 0 0 chrX 153556276 153556377 -13093919 + RSINE1 SINE B4 2 102 -63 7 1756 23 33 0 0 chrX 153556413 153556443 -13093853 + AT_rich Low_complexity Low_complexity 1 30 0 7 1756 7092 49 24 14 chrX 153557069 153558034 -13092262 + L1_Mus2 LINE L1 5587 6560 -6 7 1756 1235 197 22 173 chrX 153558074 153558491 -13091805 - ORR1C1 LTR MaLR -21 357 4 7 1756 1111 85 0 0 chrX 153558531 153558672 -13091624 - B1_Mm SINE Alu -4 143 3 7 1756 7099 61 21 2 chrX 153559369 153560327 -13089969 + L1_Mus1 LINE L1 5588 6563 -4 7 1756 1084 88 0 0 chrX 153561758 153561894 -13088402 + B1_Mus1 SINE Alu 1 136 -12 8 1756 738 0 0 0 chrX 153561894 153561976 -13088320 + (GAAA)n Simple_repeat Simple_repeat 1 82 0 8 1756 1033 128 0 16 chrX 153561979 153562161 -13088135 + (AGGGGG)n Simple_repeat Simple_repeat 1 179 0 8 1756 618 82 0 0 chrX 153562165 153562250 -13088046 + (GGAAA)n Simple_repeat Simple_repeat 1 85 0 8 1756 32979 67 1 1 chrX 153562350 153567514 -13082782 + L1Md_F3 LINE L1 469 5585 -298 8 1756 8004 47 0 2 chrX 153567515 153568496 -13081800 + L1Md_F3 LINE L1 5587 6565 -19 8 1756 437 78 32 32 chrX 153568499 153568592 -13081704 + (TAAA)n Simple_repeat Simple_repeat 4 96 0 8 1756 468 0 0 0 chrX 153569068 153569120 -13081176 + (TA)n Simple_repeat Simple_repeat 2 53 0 8 1756 2586 68 31 0 chrX 153569221 153569573 -13080723 - Lx3_Mus LINE L1 0 7009 6647 8 1756 303 115 0 37 chrX 153569571 153569625 -13080671 + Lx7 LINE L1 7635 7686 -10 8 1756 619 234 16 8 chrX 153569643 153569768 -13080528 + RSINE1 SINE B4 3 128 -37 8 1756 215 175 50 0 chrX 153569968 153570008 -13080288 + polypurine Low_complexity Low_complexity 4 45 0 9 1756 276 321 85 50 chrX 153570023 153570223 -13080073 - MER110 LTR ERV1 0 468 262 9 1756 489 290 84 0 chrX 153570278 153570433 -13079863 - MER110 LTR ERV1 -323 168 1 9 1756 22 56 0 0 chrX 153570783 153570819 -13079477 + AT_rich Low_complexity Low_complexity 1 36 0 9 1756 4267 118 80 7 chrX 153570823 153571513 -13078783 - Lx3B LINE L1 -4 6969 6230 9 1756 472 241 78 44 chrX 153571518 153571722 -13078574 - L1MA6 LINE L1 -159 6141 5935 9 1756 321 26 0 0 chrX 153571970 153572008 -13078288 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 1756 722 321 35 46 chrX 153572082 153572366 -13077930 - B4A SINE B4 -4 288 8 9 1756 477 140 11 55 chrX 153572456 153572637 -13077659 + (TCTCTG)n Simple_repeat Simple_repeat 6 178 0 9 1756 256 281 16 0 chrX 153572639 153572703 -13077593 - RMER15 LTR ERVL -108 467 403 9 1756 741 304 55 12 chrX 153572796 153573049 -13077247 - Lx8 LINE L1 -247 7226 6963 9 1756 600 340 73 0 chrX 153573054 153573260 -13077036 - ID_B1 SINE B4 -2 222 2 1 1756 1838 154 180 14 chrX 153573351 153573712 -13076584 - MTC LTR MaLR 0 421 1 1 1756 180 0 0 0 chrX 153573909 153573929 -13076367 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1756 618 307 160 28 chrX 153574688 153574976 -13075320 + Charlie1a DNA MER1_type 29 354 -1101 1 1756 363 220 0 0 chrX 153575156 153575247 -13075049 - Lx5 LINE L1 -42 7008 6918 1 1756 296 353 59 0 chrX 153575255 153575391 -13074905 + Charlie1a DNA MER1_type 405 548 -907 1 1756 364 157 11 126 chrX 153575391 153575486 -13074810 + MT2B LTR ERVL 157 240 -361 1 1756 819 145 8 15 chrX 153575406 153575539 -13074757 + B1_Mur4 SINE Alu 6 137 -13 1 1756 243 0 0 0 chrX 153575541 153575568 -13074728 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1756 1210 257 103 26 chrX 153575572 153576068 -13074228 + Charlie1a DNA MER1_type 566 1099 -356 1 1756 276 252 47 8 chrX 153576076 153576204 -13074092 + Lx4B LINE L1 6918 7050 -8 1 1756 25 31 0 0 chrX 153576204 153576236 -13074060 + AT_rich Low_complexity Low_complexity 1 32 0 1 1756 244 217 72 0 chrX 153576247 153576316 -13073980 + Charlie1a DNA MER1_type 1124 1197 -258 1 1756 465 237 61 9 chrX 153576329 153576444 -13073852 + B1F SINE Alu 21 141 -8 1 1756 303 286 0 0 chrX 153576447 153576524 -13073772 + ID4_ SINE ID 5 81 -2 1 1756 4224 73 0 9 chrX 153576666 153577220 -13073076 - L1Md_F2 LINE L1 0 6582 6034 1 1756 650 297 96 6 chrX 153577463 153577629 -13072667 + B3A SINE B2 1 181 -17 1 1756 432 105 44 44 chrX 153577662 153577752 -13072544 - L1Md_F2 LINE L1 -2 6580 6491 1 1756 734 293 16 16 chrX 153579021 153579212 -13071084 + B4 SINE B4 83 273 -19 1 1756 355 314 130 32 chrX 153579320 153579573 -13070723 + L3b LINE CR1 106 383 -99 1 1756 213 39 0 0 chrX 153579721 153579747 -13070549 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1756 270 0 0 0 chrX 153579747 153579776 -13070520 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 1756 405 58 0 0 chrX 153580173 153580225 -13070071 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 1756 328 297 39 63 chrX 153580647 153580852 -13069444 + L2 LINE L2 2690 2889 -530 1 1756 434 314 47 95 chrX 153581056 153581328 -13068968 + B4 SINE B4 52 288 -4 1 1756 844 284 10 0 chrX 153581356 153581564 -13068732 - B3 SINE B2 -6 210 1 1 1756 21 36 0 0 chrX 153581621 153581649 -13068647 + AT_rich Low_complexity Low_complexity 1 28 0 1 1756 401 296 29 50 chrX 153583014 153583153 -13067143 + RMER15 LTR ERVL 426 561 -14 1 1756 316 266 333 5 chrX 153583167 153583386 -13066910 - L1ME3B LINE L1 -313 5927 5637 1 1756 198 103 0 0 chrX 153583827 153583856 -13066440 + (TCCC)n Simple_repeat Simple_repeat 1 29 0 1 1756 324 0 0 0 chrX 153583860 153583896 -13066400 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1756 756 235 17 10 chrX 153583913 153584078 -13066218 - B3A SINE B2 -35 160 3 1 1756 303 233 97 20 chrX 153584678 153584833 -13065463 - L1ME3B LINE L1 -696 5477 5311 1 1756 27 62 0 15 chrX 153585304 153585340 -13064956 + AT_rich Low_complexity Low_complexity 1 36 0 1 1756 3031 78 5 0 chrX 153585340 153585739 -13064557 + Lx3_Mus LINE L1 6609 7009 0 1 1756 27 62 0 15 chrX 153585739 153585768 -13064528 + AT_rich Low_complexity Low_complexity 1 29 0 1 1756 441 0 0 0 chrX 153586064 153586113 -13064183 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 1756 327 49 0 0 chrX 153586113 153586153 -13064143 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1756 225 0 0 0 chrX 153586299 153586324 -13063972 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1756 8549 10 0 2 chrX 153586359 153587751 -13062545 - L1Md_T LINE L1 0 6582 5194 1 1756 3671 104 34 2 chrX 153587859 153588444 -13061852 + Lx2 LINE L1 5863 6466 -531 1 1756 240 316 51 0 chrX 153588709 153588788 -13061508 + L2a LINE L2 3311 3393 -33 1 1756 314 328 85 8 chrX 153588799 153588928 -13061368 - L2a LINE L2 -4 3422 3284 1 1756 190 323 0 31 chrX 153589228 153589292 -13061004 - L2a LINE L2 -533 2886 2825 1 1756 7651 73 14 6 chrX 153589712 153591102 -13059194 - L1_Mus3 LINE L1 0 6638 5242 1 1756 2988 133 19 11 chrX 153591251 153591721 -13058575 - Lx4A LINE L1 -2 7056 6583 1 1756 330 26 0 0 chrX 153592083 153592122 -13058174 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 1756 202 343 158 38 chrX 153592907 153593116 -13057180 + MIRb SINE MIR 27 260 -8 1 1756 533 252 49 49 chrX 153593413 153593446 -13056850 - ID_B1 SINE B4 -3 221 190 1 1756 1509 138 5 0 chrX 153593446 153593670 -13056626 - URR1A DNA MER1_type -1 225 1 1 1756 533 255 45 53 chrX 153593670 153593801 -13056495 - ID_B1 SINE B4 -35 189 67 1 1756 377 218 13 13 chrX 153593918 153593997 -13056299 - ID4_ SINE ID -2 81 3 1 1756 369 0 0 0 chrX 153595363 153595404 -13054892 + (TC)n Simple_repeat Simple_repeat 1 41 0 1 1756 381 93 0 0 chrX 153595404 153595457 -13054839 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1756 205 390 30 50 chrX 153596026 153596226 -13054070 + L2c LINE L2 3190 3385 -2 1 1756 24 0 0 0 chrX 153598474 153598498 -13051798 + AT_rich Low_complexity Low_complexity 1 24 0 1 1756 1436 66 0 0 chrX 153599287 153599469 -13050827 + L1_Mus1 LINE L1 6385 6566 -1 1 1756 717 118 0 0 chrX 153599776 153599886 -13050410 + (GAAAA)n Simple_repeat Simple_repeat 2 111 0 1 1756 25660 134 48 11 chrX 153600409 153602242 -13048054 + L1Md_F LINE L1 177 2073 -3810 1 1756 2414 82 44 3 chrX 153602242 153602612 -13047684 + L1Md_F2 LINE L1 6209 6582 0 1 1756 25660 100 18 9 chrX 153602612 153605824 -13044472 + L1Md_F LINE L1 2074 5319 -564 1 1756 261 0 0 0 chrX 153605924 153605953 -13044343 + (TAAAA)n Simple_repeat Simple_repeat 1 29 0 1 1756 23835 94 19 11 chrX 153605953 153610404 -13039892 + L1_Mus1 LINE L1 2082 6567 0 1 1756 339 65 0 0 chrX 153611114 153611160 -13039136 + (CATATA)n Simple_repeat Simple_repeat 5 50 0 1 1756 782 281 23 37 chrX 153611558 153611612 -13038684 - B3 SINE B2 -3 213 166 1 1756 333 0 0 0 chrX 153611612 153611649 -13038647 + (TATG)n Simple_repeat Simple_repeat 2 38 0 1 1756 783 281 23 37 chrX 153611649 153611808 -13038488 - B3 SINE B2 -51 165 3 1 1756 824 302 20 66 chrX 153612828 153613133 -13037163 + B4A SINE B4 1 291 -1 1 1756 338 56 0 36 chrX 153613769 153613825 -13036471 + L1Md_T LINE L1 6528 6581 -1 1 1756 878 117 13 33 chrX 153614053 153614204 -13036092 + ORR1B1 LTR MaLR 1 148 -246 1 1756 517 297 70 6 chrX 153614984 153615140 -13035156 - MER58B DNA MER1_type -1 340 175 1 1756 24 0 0 0 chrX 153615142 153615166 -13035130 + AT_rich Low_complexity Low_complexity 1 24 0 1 1756 617 214 17 0 chrX 153615710 153615827 -13034469 + PB1D7 SINE Alu 1 119 -1 1 1756 331 307 32 48 chrX 153616045 153616233 -13034063 - Charlie18a DNA MER1_type -132 210 26 1 1757 699 268 104 5 chrX 153617322 153617543 -13032753 + MER58B DNA MER1_type 23 265 -76 1 1757 1297 273 135 24 chrX 153617576 153617791 -13032505 + MLT1D LTR MaLR 5 272 -233 1 1757 1852 204 19 19 chrX 153617791 153618156 -13032140 - ORR1B2 LTR MaLR -2 365 1 1 1757 1297 273 135 24 chrX 153618156 153618391 -13031905 + MLT1D LTR MaLR 273 505 0 1 1757 245 371 11 0 chrX 153619024 153619113 -13031183 + LTR16A1 LTR ERVL 367 456 0 1 1757 25 0 0 0 chrX 153619209 153619234 -13031062 + AT_rich Low_complexity Low_complexity 1 25 0 1 1757 198 250 0 0 chrX 153619523 153619579 -13030717 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1757 1663 200 58 28 chrX 153619990 153620149 -13030147 + ORR1D1 LTR MaLR 1 175 -199 1 1757 1104 79 0 0 chrX 153620149 153620379 -13029917 + (TC)n Simple_repeat Simple_repeat 1 230 0 1 1757 1663 200 58 28 chrX 153620379 153620577 -13029719 + ORR1D1 LTR MaLR 176 371 -3 1 1757 417 277 10 0 chrX 153621528 153621629 -13028667 - MER5A DNA MER1_type -87 102 1 1 1757 198 0 0 0 chrX 153623243 153623265 -13027031 + (CAGAGA)n Simple_repeat Simple_repeat 3 24 0 1 1757 484 311 25 0 chrX 153623331 153623450 -13026846 + RSINE1 SINE B4 3 124 -41 1 1757 327 85 0 0 chrX 153623450 153623497 -13026799 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1757 362 296 31 0 chrX 153623946 153624044 -13026252 - U4 snRNA snRNA -42 103 3 1 1757 269 260 37 65 chrX 153624391 153624498 -13025798 + MIR3 SINE MIR 100 203 -5 1 1757 24 53 0 0 chrX 153624545 153624583 -13025713 + AT_rich Low_complexity Low_complexity 1 38 0 1 1757 400 333 69 100 chrX 153624880 153625170 -13025126 + MLT1H LTR MaLR 80 360 -189 1 1757 1901 174 13 42 chrX 153625265 153625642 -13024654 + ORR1B2 LTR MaLR 2 367 0 1 1757 351 0 0 0 chrX 153627002 153627041 -13023255 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 1757 319 231 125 71 chrX 153627174 153627286 -13023010 + PB1D7 SINE Alu 1 118 -2 1 1757 201 350 101 34 chrX 153627334 153627482 -13022814 - L3 LINE CR1 -113 4376 4219 1 1757 253 365 94 0 chrX 153627553 153627638 -13022658 + B1F2 SINE Alu 18 110 -39 1 1757 983 202 58 10 chrX 153627699 153627904 -13022392 - B3 SINE B2 0 216 2 1 1757 227 205 0 0 chrX 153629044 153629083 -13021213 + LTR16C LTR ERVL 286 324 -165 1 1757 829 277 102 57 chrX 153629112 153629445 -13020851 + MLT1D LTR MaLR 17 364 -141 1 1757 3493 20 0 2 chrX 153629503 153629900 -13020396 + MTA_Mm LTR MaLR 1 396 0 1 1757 396 0 0 0 chrX 153629900 153629944 -13020352 + (TCTA)n Simple_repeat Simple_repeat 4 47 0 1 1757 299 320 80 0 chrX 153629975 153630100 -13020196 + LTR16C LTR ERVL 355 489 0 1 1757 3115 30 0 0 chrX 153630751 153631119 -13019177 + L1Md_T LINE L1 6215 6582 0 1 1757 890 155 7 0 chrX 153631119 153631267 -13019029 + ORR1B2-int LTR MaLR 1222 1370 0 1 1757 2263 152 8 8 chrX 153631270 153631634 -13018662 + ORR1B2 LTR MaLR 4 367 0 1 1757 1351 355 37 11 chrX 153632069 153632681 -13017615 + MER45B DNA Tip100 6 643 -397 1 1757 716 284 72 81 chrX 153632752 153632764 -13017532 + MER45B DNA Tip100 633 644 -396 1 1757 279 79 0 0 chrX 153632764 153632802 -13017494 + (TAG)n Simple_repeat Simple_repeat 1 38 0 1 1757 716 293 77 70 chrX 153632802 153633193 -13017103 + MER45B DNA Tip100 645 1039 -1 1 1757 4273 38 8 2 chrX 153634507 153635034 -13015262 - L1Md_F3 LINE L1 -10 6574 6045 1 1757 243 0 0 0 chrX 153635081 153635108 -13015188 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1757 993 301 71 49 chrX 153635355 153635848 -13014448 + Tigger9b DNA MER2_type 4 507 -117 1 1757 374 207 72 85 chrX 153635852 153635998 -13014298 - B3A SINE B2 0 198 3 1 1757 369 0 0 0 chrX 153637245 153637286 -13013010 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1757 769 112 127 0 chrX 153637403 153637537 -13012759 - URR1A DNA MER1_type 0 226 76 2 1757 274 129 0 31 chrX 153637715 153637779 -13012517 - Lx9 LINE L1 -6 7638 7577 2 1757 822 276 28 0 chrX 153638109 153638290 -13012006 + B4A SINE B4 2 187 -105 2 1757 510 263 95 0 chrX 153640061 153640198 -13010098 + MER5A DNA MER1_type 6 155 -34 2 1757 274 350 105 47 chrX 153641211 153641382 -13008914 - MER5A DNA MER1_type 0 189 9 2 1757 290 220 41 114 chrX 153642983 153643106 -13007190 + MT2A LTR ERVL 1 114 -419 2 1757 1046 251 121 22 chrX 153643146 153643191 -13007105 + MT2A LTR ERVL 186 234 -299 2 1757 525 104 0 0 chrX 153643191 153643268 -13007028 + (TTG)n Simple_repeat Simple_repeat 2 78 0 2 1757 1046 251 121 22 chrX 153643268 153643536 -13006760 + MT2A LTR ERVL 235 530 -3 2 1757 1584 114 8 8 chrX 153643599 153643846 -13006450 + RMER17B LTR ERVK 1 247 -711 2 1757 2068 128 37 19 chrX 153643823 153644197 -13006099 + RMER17B LTR ERVK 578 958 0 2 1757 342 0 0 0 chrX 153645037 153645075 -13005221 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 1757 1129 93 37 47 chrX 153645146 153645361 -13004935 + L1_Mus3 LINE L1 6426 6638 0 2 1757 204 227 23 0 chrX 153645361 153645405 -13004891 + GA-rich Low_complexity Low_complexity 5 49 0 2 1757 1046 96 6 0 chrX 153645564 153645721 -13004575 + (GAAAA)n Simple_repeat Simple_repeat 2 159 0 2 1757 192 365 52 0 chrX 153645724 153645820 -13004476 - MIR SINE MIR -161 101 1 2 1757 1232 286 122 26 chrX 153645858 153646241 -13004055 - MLT1F LTR MaLR -7 541 112 2 1757 396 0 0 0 chrX 153646241 153646285 -13004011 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 1757 1232 286 122 26 chrX 153646285 153646368 -13003928 - MLT1F LTR MaLR -437 111 30 2 1757 434 271 7 29 chrX 153646409 153646546 -13003750 - RCHARR1 DNA MER1_type -2 972 839 2 1757 1418 156 22 182 chrX 153646555 153647010 -13003286 - RLTR23 LTR ERV1 -48 382 1 2 1757 288 340 32 19 chrX 153647061 153647277 -13003019 - MuRRS4-int LTR ERV1 -128 4935 4717 2 1757 353 174 50 180 chrX 153647282 153647443 -13002853 - RCHARR1 DNA MER1_type -120 854 715 2 1757 2034 113 29 3 chrX 153647456 153647767 -13002529 + Lx2 LINE L1 6677 6995 -2 2 1757 210 118 0 0 chrX 153647771 153647805 -13002491 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 2 1757 757 263 15 73 chrX 153647882 153648087 -13002209 - B3A SINE B2 0 198 6 2 1757 625 291 52 14 chrX 153648043 153648256 -13002040 - RCHARR1 DNA MER1_type -264 710 490 2 1757 507 262 0 32 chrX 153648291 153648417 -13001879 - B4A SINE B4 -8 284 163 2 1757 230 69 0 0 chrX 153648439 153648468 -13001828 + L1Md_F2 LINE L1 5558 5586 -297 2 1757 7904 44 2 25 chrX 153648469 153649488 -13000808 + L1Md_F2 LINE L1 5588 6582 0 2 1757 408 302 94 3 chrX 153649510 153649635 -13000661 - B4A SINE B4 -89 135 1 2 1757 340 146 0 0 chrX 153649650 153649698 -13000598 - tRNA-Arg-CGY_ tRNA tRNA -25 51 4 2 1757 587 235 26 19 chrX 153649698 153649854 -13000442 - RCHARR1 DNA MER1_type -468 506 350 2 1757 499 162 58 39 chrX 153649854 153649957 -13000339 - RCHARR1 DNA MER1_type -797 177 73 2 1757 1156 44 0 0 chrX 153650152 153650289 -13000007 + B1_Mus2 SINE Alu 1 137 -10 2 1757 1027 79 0 13 chrX 153650289 153650442 -12999854 + (GAAA)n Simple_repeat Simple_repeat 2 152 0 2 1757 525 278 132 11 chrX 153651034 153651216 -12999080 + MER58A DNA MER1_type 13 216 -8 2 1757 284 243 13 63 chrX 153651358 153651437 -12998859 - ID4 SINE ID -6 77 3 2 1757 488 287 61 49 chrX 153651496 153651760 -12998536 - L1ME3 LINE L1 -152 6010 5744 2 1757 405 286 176 49 chrX 153653065 153653389 -12996907 + L1M5 LINE L1 5448 5812 -428 2 1757 1000 231 5 25 chrX 153653452 153653652 -12996644 + B3 SINE B2 1 196 -20 2 1757 348 256 0 49 chrX 153653743 153653825 -12996471 + B1_Mur1 SINE Alu 67 144 -5 2 1757 762 129 0 0 chrX 153654525 153654665 -12995631 + (GA)n Simple_repeat Simple_repeat 1 140 0 2 1757 1683 123 0 32 chrX 153655107 153655385 -12994911 + Lx2 LINE L1 6729 6997 0 2 1757 537 220 125 21 chrX 153655535 153655679 -12994617 + RSINE1 SINE B4 3 161 -4 2 1757 551 216 0 9 chrX 153656100 153656212 -12994084 + ID_B1 SINE B4 100 210 -14 2 1757 200 372 10 10 chrX 153656325 153656428 -12993868 - L2 LINE L2 -639 2780 2678 2 1757 369 292 25 83 chrX 153656448 153656605 -12993691 - L2 LINE L2 -1080 2339 2192 2 1757 303 255 145 99 chrX 153657007 153657167 -12993129 - MER5A DNA MER1_type -6 183 18 2 1757 655 242 54 177 chrX 153657385 153657701 -12992595 - MTD LTR MaLR 0 419 143 2 1757 648 38 0 0 chrX 153657705 153657784 -12992512 + (TC)n Simple_repeat Simple_repeat 2 80 0 2 1757 357 213 146 28 chrX 153658123 153658316 -12991980 + L1M3 LINE L1 4355 4589 -1551 2 1757 816 171 218 22 chrX 153658575 153658754 -12991542 + B3 SINE B2 3 216 0 2 1757 447 333 40 13 chrX 153659180 153659332 -12990964 + RSINE1 SINE B4 3 158 -7 2 1757 181 278 73 18 chrX 153659384 153659439 -12990857 + MIR3 SINE MIR 137 194 -14 2 1757 621 254 161 12 chrX 153659476 153659731 -12990565 - MER58D DNA MER1_type -37 349 57 2 1757 303 286 0 0 chrX 153659837 153659900 -12990396 + tRNA-Ala-GCY_ tRNA tRNA 1 63 -12 2 1757 290 325 13 0 chrX 153659900 153659912 -12990384 + ID4_ SINE ID 7 82 -1 2 1757 840 272 56 98 chrX 153660414 153660720 -12989576 + MLT1E2 LTR MaLR 33 325 -302 2 1757 2911 29 3 0 chrX 153661139 153661484 -12988812 - L1Md_F2 LINE L1 -14 6568 6223 2 1757 259 339 9 26 chrX 153661616 153661731 -12988565 + MLT1F1 LTR MaLR 9 121 -448 2 1757 695 282 104 0 chrX 153661736 153661938 -12988358 + ID_B1 SINE B4 1 223 -1 2 1757 2010 75 0 0 chrX 153662079 153662331 -12987965 + L1_Mus2 LINE L1 6157 6408 -158 2 1757 1434 200 3 65 chrX 153662331 153662625 -12987671 + RLTR26 LTR ERVK 367 642 0 2 1757 2556 47 0 6 chrX 153662685 153663005 -12987291 + L1_Mus1 LINE L1 6250 6567 0 2 1757 352 286 62 0 chrX 153663044 153663180 -12987116 + MLT1E2 LTR MaLR 409 571 -8 2 1757 237 271 146 0 chrX 153664702 153664798 -12985498 + MER2 DNA MER2_type 79 188 -157 2 1757 458 240 16 55 chrX 153664792 153664920 -12985376 + ORR1D2 LTR MaLR 97 219 -151 2 1757 3644 216 24 6 chrX 153664964 153665689 -12984607 + RMER1B Other Other 9 1064 -2 2 1757 871 213 12 6 chrX 153665689 153665859 -12984437 + ORR1D2 LTR MaLR 195 365 -5 2 1757 661 278 31 0 chrX 153665863 153666025 -12984271 + MER2 DNA MER2_type 179 345 0 2 1757 984 287 33 40 chrX 153666277 153666553 -12983743 + B4A SINE B4 11 284 -8 2 1757 384 340 62 5 chrX 153666583 153666793 -12983503 + L1_Rod LINE L1 467 688 -6920 2 1757 289 266 193 9 chrX 153666778 153666892 -12983404 + L1_Rod LINE L1 7 141 -7031 2 1757 3035 23 0 3 chrX 153666897 153667244 -12983052 + ORR1A0 LTR MaLR 1 346 0 2 1757 14269 48 8 1 chrX 153667244 153669023 -12981273 + ORR1A0-int LTR MaLR 1 1792 0 2 1757 3008 12 21 0 chrX 153669023 153669362 -12980934 + ORR1A0 LTR MaLR 1 346 0 2 1757 5047 208 80 29 chrX 153669362 153670907 -12979389 + L1_Rod LINE L1 579 2197 -3650 2 1757 1346 104 5 15 chrX 153670907 153671102 -12979194 + B2_Mm1a SINE B2 1 193 0 2 1757 5047 184 97 21 chrX 153671102 153671237 -12979059 + L1_Rod LINE L1 2198 2350 -3497 2 1757 3358 31 7 37 chrX 153671237 153671671 -12978625 + L1Md_F3 LINE L1 6162 6582 -2 2 1757 5047 184 97 21 chrX 153671671 153671951 -12978345 + L1_Rod LINE L1 2351 2627 -3220 2 1757 2372 174 145 12 chrX 153671949 153672555 -12977741 + Lx9 LINE L1 6958 7644 0 2 1757 1032 97 0 46 chrX 153672675 153672827 -12977469 + B1_Mus2 SINE Alu 3 147 0 2 1757 451 248 247 32 chrX 153674077 153674360 -12975936 + L1M4b LINE L1 1324 1667 -5667 2 1757 843 297 37 48 chrX 153674491 153674763 -12975533 + B4A SINE B4 3 271 -21 2 1757 1321 156 4 18 chrX 153675102 153675331 -12974965 - URR1A DNA MER1_type 0 226 1 2 1757 4066 60 0 2 chrX 153675346 153675864 -12974432 - L1Md_F2 LINE L1 0 6582 6066 2 1757 4833 87 1 1 chrX 153677388 153678035 -12972261 + L1Md_F2 LINE L1 5917 6563 -19 2 1757 279 240 210 28 chrX 153678412 153678588 -12971708 - Lx8 LINE L1 0 7473 7266 2 1757 212 152 16 33 chrX 153678626 153678687 -12971609 + (TTTG)n Simple_repeat Simple_repeat 4 63 0 2 1757 13738 82 19 5 chrX 153678753 153681570 -12968726 - L1VL2 LINE L1 -628 2987 125 2 1757 844 206 0 7 chrX 153681579 153681721 -12968575 - B1_Mus1 SINE Alu -2 146 6 2 1757 885 270 18 32 chrX 153681860 153682078 -12968218 - B3 SINE B2 0 216 2 2 1757 270 0 0 0 chrX 153682152 153682182 -12968114 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1757 399 41 0 0 chrX 153682182 153682231 -12968065 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1757 2079 144 0 38 chrX 153682352 153682406 -12967890 - ORR1A2 LTR MaLR 0 327 286 2 1757 1980 37 0 8 chrX 153682406 153682652 -12967644 - L1Md_F3 LINE L1 -14 6570 6327 2 1757 2079 144 0 38 chrX 153682652 153682937 -12967359 - ORR1A2 LTR MaLR -42 285 1 2 1757 20262 173 92 17 chrX 153683166 153685593 -12964703 + L1_Mus3 LINE L1 219 2749 -3137 2 1757 1196 49 0 0 chrX 153685593 153685735 -12964561 + B1_Mm SINE Alu 1 142 -5 2 1757 20262 144 55 7 chrX 153685735 153689353 -12960943 + L1_Mus3 LINE L1 2750 6635 -3 2 1757 317 321 28 0 chrX 153689776 153689882 -12960414 + PB1 SINE Alu 2 110 -17 2 1757 237 108 0 0 chrX 153689893 153689930 -12960366 + (TAA)n Simple_repeat Simple_repeat 1 37 0 2 1757 23 78 0 0 chrX 153689995 153690046 -12960250 + AT_rich Low_complexity Low_complexity 1 51 0 2 1757 707 174 138 11 chrX 153690280 153690466 -12959830 - B3 SINE B2 0 195 1 2 1757 357 267 11 34 chrX 153690585 153690674 -12959622 + PB1D10 SINE Alu 3 89 -28 2 1757 198 0 0 0 chrX 153691770 153691792 -12958504 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 2 1757 215 55 0 53 chrX 153692032 153692070 -12958226 + (TCTCTG)n Simple_repeat Simple_repeat 2 37 0 2 1757 450 0 0 0 chrX 153692527 153692577 -12957719 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1757 694 282 93 15 chrX 153693891 153694096 -12956200 - MIR SINE MIR -30 232 12 2 1757 498 229 166 0 chrX 153694250 153694425 -12955871 - B3 SINE B2 -12 204 1 2 1757 211 241 0 134 chrX 153694438 153694505 -12955791 - MIRb SINE MIR -16 252 195 2 1757 1416 230 70 29 chrX 153694505 153694659 -12955637 + Lx6 LINE L1 6924 7079 -381 2 1757 4002 7 0 0 chrX 153694659 153695105 -12955191 + L1Md_A LINE L1 6137 6582 0 2 1757 1416 230 70 29 chrX 153695105 153695195 -12955101 + Lx6 LINE L1 7080 7177 -283 2 1757 225 0 0 0 chrX 153695195 153695220 -12955076 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 2 1757 1416 230 70 29 chrX 153695220 153695315 -12954981 + Lx6 LINE L1 7178 7277 -183 2 1757 218 174 43 0 chrX 153695318 153695364 -12954932 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 2 1757 585 220 6 28 chrX 153695398 153695580 -12954716 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 2 1757 490 211 17 11 chrX 153695634 153695811 -12954485 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 2 1757 489 194 17 17 chrX 153695861 153696034 -12954262 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 2 1757 552 174 11 48 chrX 153696069 153696256 -12954040 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 2 1757 364 241 17 11 chrX 153696294 153696470 -12953826 + (TAGA)n Simple_repeat Simple_repeat 4 180 0 2 1757 1061 16 8 0 chrX 153696504 153696631 -12953665 + (TAGA)n Simple_repeat Simple_repeat 2 129 0 2 1757 252 184 0 0 chrX 153696695 153696744 -12953552 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 2 1757 347 157 14 0 chrX 153696778 153696848 -12953448 + (CAGA)n Simple_repeat Simple_repeat 2 72 0 2 1757 216 0 0 0 chrX 153696894 153696918 -12953378 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 2 1757 429 95 0 0 chrX 153696951 153697014 -12953282 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 2 1757 205 176 0 0 chrX 153697014 153697048 -12953248 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 2 1757 629 164 11 23 chrX 153697079 153697254 -12953042 + (TAGA)n Simple_repeat Simple_repeat 3 175 0 3 1757 205 176 0 0 chrX 153697260 153697294 -12953002 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 3 1757 644 180 11 22 chrX 153697327 153697509 -12952787 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 3 1757 362 151 14 0 chrX 153697544 153697617 -12952679 + (TAGA)n Simple_repeat Simple_repeat 3 76 0 3 1757 855 55 0 0 chrX 153697651 153697760 -12952536 + (TAGA)n Simple_repeat Simple_repeat 2 110 0 3 1757 422 132 13 0 chrX 153697820 153697896 -12952400 + (TAGA)n Simple_repeat Simple_repeat 4 80 0 3 1757 866 10 10 0 chrX 153697930 153698033 -12952263 + (TAGA)n Simple_repeat Simple_repeat 2 105 0 3 1757 374 225 12 24 chrX 153698096 153698260 -12952036 + (TAGA)n Simple_repeat Simple_repeat 1 162 0 3 1757 216 0 0 0 chrX 153698304 153698328 -12951968 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 3 1757 414 85 0 0 chrX 153698361 153698420 -12951876 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 3 1757 205 176 0 0 chrX 153698420 153698454 -12951842 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 3 1757 758 148 11 33 chrX 153698485 153698667 -12951629 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 3 1757 596 143 32 0 chrX 153698712 153698838 -12951458 + (TAGA)n Simple_repeat Simple_repeat 3 132 0 3 1757 349 270 18 18 chrX 153698887 153699000 -12951296 + Lx7 LINE L1 7196 7308 -388 3 1757 40 49 0 0 chrX 153699189 153699250 -12951046 + AT_rich Low_complexity Low_complexity 1 61 0 3 1757 1278 91 0 31 chrX 153700079 153700271 -12950025 - B2_Mm2 SINE B2 -7 188 3 3 1757 908 237 8 85 chrX 153700641 153700876 -12949420 + MTE2a LTR MaLR 155 371 -8 3 1757 432 111 0 0 chrX 153702377 153702458 -12947838 + (TG)n Simple_repeat Simple_repeat 1 81 0 3 1757 681 305 28 0 chrX 153702478 153702655 -12947641 - B3A SINE B2 -16 182 1 3 1757 602 240 15 8 chrX 153702799 153702929 -12947367 + B1F SINE Alu 10 140 -9 3 1757 270 0 0 0 chrX 153702932 153702962 -12947334 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1757 206 121 30 0 chrX 153703587 153703620 -12946676 + (CAGGG)n Simple_repeat Simple_repeat 5 38 0 3 1757 3040 63 0 50 chrX 153703762 153704179 -12946117 - MTA_Mm LTR MaLR 0 396 1 3 1757 827 173 20 13 chrX 153704371 153704523 -12945773 + RMER20A LTR ERVK 1 153 -363 3 1757 2187 135 36 28 chrX 153704518 153705028 -12945268 - ORR1A3-int LTR MaLR -193 1316 802 3 1757 1094 198 10 10 chrX 153705489 153705698 -12944598 + B3 SINE B2 1 209 -7 3 1757 187 348 33 33 chrX 153706504 153706596 -12943700 - L2c LINE L2 -5 3382 3291 3 1757 962 252 166 68 chrX 153706873 153707404 -12942892 + L1MA8 LINE L1 5328 5910 -381 3 1757 492 254 8 0 chrX 153707528 153707662 -12942634 + L1MA8 LINE L1 6131 6265 -26 3 1757 615 314 18 26 chrX 153708009 153708235 -12942061 + MER58A DNA MER1_type 1 224 0 3 1757 351 0 0 0 chrX 153708301 153708340 -12941956 + (TAAAA)n Simple_repeat Simple_repeat 5 43 0 3 1757 240 205 13 13 chrX 153708451 153708530 -12941766 - Lx9 LINE L1 -6 7638 7560 3 1757 225 94 0 0 chrX 153708599 153708631 -12941665 + (GGGAGA)n Simple_repeat Simple_repeat 6 37 0 3 1757 366 312 88 16 chrX 153708658 153708850 -12941446 - Lx9 LINE L1 -214 7430 7225 3 1757 437 342 86 68 chrX 153708958 153709250 -12941046 + LTR16A1 LTR ERVL 159 455 -1 3 1757 471 357 195 23 chrX 153710169 153710520 -12939776 + LTR33B LTR ERVL 73 483 -20 3 1757 516 301 62 24 chrX 153711203 153711414 -12938882 - MER20 DNA MER1_type 0 219 1 3 1757 244 159 0 0 chrX 153712281 153712325 -12937971 + Lx8 LINE L1 5858 5901 -1572 3 1757 234 0 0 0 chrX 153712346 153712372 -12937924 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 1757 1381 71 22 0 chrX 153712389 153712572 -12937724 + B2_Mm2 SINE B2 1 187 -8 3 1757 500 327 32 0 chrX 153713465 153713621 -12936675 + Tigger7 DNA MER2_type 4 164 -2327 3 1757 255 250 0 0 chrX 153713693 153713745 -12936551 + MTE2b LTR MaLR 313 364 -15 3 1757 387 0 0 0 chrX 153713758 153713801 -12936495 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1757 501 269 42 67 chrX 153715879 153716157 -12934139 + MER34A LTR ERV1 31 297 -290 3 1757 288 161 72 24 chrX 153716219 153716302 -12933994 + (CAGAGA)n Simple_repeat Simple_repeat 4 90 0 3 1757 587 235 7 42 chrX 153716568 153716710 -12933586 + MER58A DNA MER1_type 85 221 -3 3 1757 21 36 0 0 chrX 153716760 153716788 -12933508 + AT_rich Low_complexity Low_complexity 1 28 0 3 1757 428 271 36 61 chrX 153717256 153717421 -12932875 + RSINE1 SINE B4 3 163 -2 3 1757 597 171 0 0 chrX 153717421 153717591 -12932705 + GA-rich Low_complexity Low_complexity 1 170 0 3 1757 240 275 143 14 chrX 153717677 153717747 -12932549 + PB1D10 SINE Alu 10 88 -29 3 1757 4854 55 5 7 chrX 153717749 153718368 -12931928 + L1Md_F2 LINE L1 5958 6575 -7 3 1757 458 175 0 10 chrX 153718412 153718510 -12931786 - Lx9 LINE L1 -7 7637 7541 3 1757 405 0 0 0 chrX 153718512 153718557 -12931739 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 1757 348 24 0 0 chrX 153718557 153718597 -12931699 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1757 384 190 0 0 chrX 153718749 153718828 -12931468 + GA-rich Low_complexity Low_complexity 3 81 0 3 1757 21 36 0 0 chrX 153720195 153720223 -12930073 + AT_rich Low_complexity Low_complexity 1 28 0 3 1757 427 295 217 0 chrX 153720422 153720551 -12929745 - B3A SINE B2 -41 157 1 3 1757 839 218 104 121 chrX 153720609 153720906 -12929390 + ORR1D1 LTR MaLR 42 333 -41 3 1757 33794 49 0 4 chrX 153720907 153726596 -12923700 + L1Md_T LINE L1 1 5589 -297 3 1757 8516 31 0 0 chrX 153726596 153727592 -12922704 + L1Md_T LINE L1 5590 6585 0 3 1757 3330 106 6 0 chrX 153727614 153728135 -12922161 + MusHAL1 LINE L1 1068 1591 -1121 3 1757 2414 57 0 0 chrX 153728137 153728434 -12921862 + L1_Mus1 LINE L1 6270 6566 -1 3 1757 27 49 0 0 chrX 153728744 153728785 -12921511 + AT_rich Low_complexity Low_complexity 1 41 0 3 1757 592 24 0 24 chrX 153728914 153728998 -12921298 + (GTTTG)n Simple_repeat Simple_repeat 2 83 0 3 1757 846 53 0 17 chrX 153728998 153729104 -12921192 - B1_Mus2 SINE Alu -7 140 35 3 1757 568 295 0 0 chrX 153729790 153729929 -12920367 + B1_Mm SINE Alu 1 139 -8 3 1757 715 88 18 0 chrX 153729930 153730043 -12920253 + (GA)n Simple_repeat Simple_repeat 2 116 0 3 1757 33 25 0 0 chrX 153730172 153730212 -12920084 + AT_rich Low_complexity Low_complexity 1 40 0 3 1757 236 333 0 0 chrX 153730722 153730773 -12919523 + Cheshire DNA MER1_type 7 57 -2363 3 1757 251 307 102 0 chrX 153730767 153730855 -12919441 + Cheshire DNA MER1_type 169 265 -2155 3 1757 417 315 117 4 chrX 153731965 153732204 -12918092 + L1MA7 LINE L1 5869 6134 -157 3 1757 5267 210 79 53 chrX 153732204 153733740 -12916556 + Lx9 LINE L1 6070 7644 0 3 1757 341 212 129 26 chrX 153733749 153733904 -12916392 + L1MA7 LINE L1 6120 6290 -1 3 1757 32 26 0 0 chrX 153733910 153733949 -12916347 + AT_rich Low_complexity Low_complexity 1 39 0 3 1757 306 212 15 0 chrX 153733989 153734055 -12916241 + Lx5 LINE L1 6671 6737 -313 3 1757 355 322 98 16 chrX 153734239 153734422 -12915874 + MLT1H1 LTR MaLR 37 234 -321 3 1757 267 266 61 41 chrX 153734462 153734560 -12915736 + MLT1H1 LTR MaLR 323 422 -67 3 1757 1294 74 11 22 chrX 153734782 153734962 -12915334 + B2_Mm2 SINE B2 1 178 -17 3 1757 2175 202 46 212 chrX 153735889 153736906 -12913390 - RMER1B Other Other -141 925 84 3 1757 576 0 0 0 chrX 153736906 153736970 -12913326 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 1757 2175 202 46 212 chrX 153736970 153737009 -12913287 - RMER1B Other Other -983 83 45 3 1757 267 31 0 0 chrX 153737622 153737654 -12912642 + (TTG)n Simple_repeat Simple_repeat 2 33 0 3 1757 294 29 0 0 chrX 153737654 153737689 -12912607 + (TGG)n Simple_repeat Simple_repeat 3 37 0 3 1757 455 258 64 94 chrX 153738075 153738435 -12911861 + L1MC5 LINE L1 6799 7147 -814 3 1757 793 280 47 43 chrX 153738591 153738867 -12911429 + B4A SINE B4 2 278 -14 3 1757 270 0 0 0 chrX 153738872 153738902 -12911394 + (TAGA)n Simple_repeat Simple_repeat 1 30 0 3 1757 239 254 139 14 chrX 153738923 153738995 -12911301 - ID4 SINE ID -1 82 2 3 1757 332 281 115 10 chrX 153738995 153739099 -12911197 - PB1D10 SINE Alu -2 115 1 3 1757 515 267 9 0 chrX 153739342 153739458 -12910838 + ID_B1 SINE B4 82 198 -26 3 1757 358 274 161 14 chrX 153739616 153739827 -12910469 + L1ME4a LINE L1 5834 6075 -49 3 1757 423 348 67 82 chrX 153739847 153740251 -12910045 + L3 LINE CR1 3648 4045 -444 3 1757 309 368 33 0 chrX 153740282 153740464 -12909832 - MER5A DNA MER1_type 0 189 2 3 1757 295 346 62 31 chrX 153740491 153740685 -12909611 + MIR SINE MIR 37 236 -26 3 1757 2683 77 0 11 chrX 153740768 153741138 -12909158 - L1Md_F2 LINE L1 -2 6580 6215 3 1757 363 296 36 36 chrX 153741399 153741539 -12908757 + MER5A1 DNA MER1_type 20 159 -7 3 1757 225 121 33 49 chrX 153741645 153741706 -12908590 + CT-rich Low_complexity Low_complexity 2 61 0 3 1757 347 127 0 16 chrX 153741891 153741955 -12908341 + (CATA)n Simple_repeat Simple_repeat 2 64 0 3 1757 537 207 209 0 chrX 153741984 153742151 -12908145 + B3 SINE B2 9 210 -6 3 1757 25 51 0 0 chrX 153742243 153742282 -12908014 + AT_rich Low_complexity Low_complexity 1 39 0 3 1757 456 75 0 0 chrX 153744503 153744570 -12905726 + Lx9 LINE L1 7574 7640 -4 3 1757 482 139 0 11 chrX 153746034 153746121 -12904175 + CT-rich Low_complexity Low_complexity 2 87 0 3 1757 977 71 0 19 chrX 153746729 153746887 -12903409 + MusHAL1 LINE L1 1926 2080 -632 3 1757 227 206 90 60 chrX 153746945 153747012 -12903284 + RLTR25A LTR ERVK 514 582 -521 3 1757 736 52 10 0 chrX 153746959 153747055 -12903241 + B1_Mm SINE Alu 51 147 0 3 1757 29 84 0 0 chrX 153747114 153747185 -12903111 + AT_rich Low_complexity Low_complexity 1 71 0 3 1757 613 112 0 0 chrX 153747185 153747274 -12903022 + Lx2 LINE L1 6554 6642 -355 3 219 1411 117 0 13 chrX 153747275 153747501 -12902795 + Lx2 LINE L1 6775 6997 0 3 1758 391 203 0 14 chrX 153749123 153749193 -12901103 + ID4_ SINE ID 2 70 -13 3 1758 301 221 29 0 chrX 153749198 153749266 -12901030 + HAL1-3A_ME LINE L1 1980 2049 -809 3 1758 352 91 52 0 chrX 153749266 153749343 -12900953 + (CAGAGA)n Simple_repeat Simple_repeat 3 83 0 3 1758 22 0 0 0 chrX 153750373 153750395 -12899901 + AT_rich Low_complexity Low_complexity 1 22 0 3 1758 341 250 0 0 chrX 153750427 153750499 -12899797 - MER5B DNA MER1_type -97 81 10 3 1758 233 295 98 69 chrX 153750518 153750620 -12899676 - MIRb SINE MIR -57 151 47 3 1758 510 46 0 0 chrX 153751054 153751119 -12899177 + (GA)n Simple_repeat Simple_repeat 1 65 0 4 1758 840 92 0 0 chrX 153751197 153751316 -12898980 + (GGGA)n Simple_repeat Simple_repeat 4 122 0 4 1758 315 18 0 51 chrX 153752108 153752167 -12898129 - L1_Mus4 LINE L1 0 6636 6581 4 1758 372 137 7 199 chrX 153753235 153753371 -12896925 + L1VL1 LINE L1 44 126 -6296 4 1758 352 283 14 7 chrX 153753455 153753601 -12896695 + L1Md_F2 LINE L1 675 821 -5795 4 1758 1680 164 3 181 chrX 153753591 153753935 -12896361 + L1Md_F2 LINE L1 725 1071 -5545 4 1758 251 233 98 23 chrX 153753935 153753986 -12896310 - RMER17A LTR ERVK -274 477 414 4 1758 1172 68 0 0 chrX 153753986 153754133 -12896163 + B1_Mm SINE Alu 1 147 0 4 1758 251 233 98 23 chrX 153754133 153754213 -12896083 - RMER17A LTR ERVK -338 413 336 4 1758 27870 101 14 27 chrX 153754213 153756984 -12893312 + L1Md_F2 LINE L1 1072 3851 -2032 4 1758 372 22 0 0 chrX 153756984 153757029 -12893267 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1758 27870 96 16 9 chrX 153757029 153758763 -12891533 + L1Md_F2 LINE L1 3852 5584 -299 4 1758 7011 90 16 5 chrX 153758764 153759748 -12890548 + L1Md_F2 LINE L1 5587 6581 -1 4 1758 7001 80 27 4 chrX 153759751 153761277 -12889019 + L1_Mus2 LINE L1 4992 6565 -1 4 1758 4780 215 48 25 chrX 153761915 153763340 -12886956 + L1Md_F2 LINE L1 4128 5586 -297 4 1758 8156 40 6 0 chrX 153763341 153764329 -12885967 + L1Md_F2 LINE L1 5588 6581 -1 4 1758 375 36 146 0 chrX 153764329 153764384 -12885912 + L1Md_F2 LINE L1 5524 5586 -297 4 1758 7631 49 30 1 chrX 153764384 153765339 -12884957 + L1Md_F2 LINE L1 5587 6569 -13 4 1758 525 32 0 0 chrX 153765346 153765409 -12884887 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 1758 315 0 0 0 chrX 153765409 153765443 -12884853 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1758 207 200 35 35 chrX 153765447 153765504 -12884792 + (CCCTAG)n Simple_repeat Simple_repeat 3 59 0 4 1758 605 257 48 97 chrX 153766808 153767015 -12883281 + B3A SINE B2 2 198 0 4 1758 282 310 17 42 chrX 153767241 153767359 -12882937 - MIRb SINE MIR -9 259 145 4 1758 803 321 57 87 chrX 153767376 153767511 -12882785 + MLT1H LTR MaLR 23 171 -378 4 1758 950 241 194 16 chrX 153767511 153767831 -12882465 - MTEb LTR MaLR -2 377 1 4 1758 803 321 57 87 chrX 153767831 153768084 -12882212 + MLT1H LTR MaLR 172 399 -150 4 1758 683 294 88 109 chrX 153769035 153769466 -12880830 + MER31B LTR ERV1 1 422 -44 4 1758 635 292 24 14 chrX 153769477 153769689 -12880607 + B3 SINE B2 1 214 -2 4 1758 22 35 0 0 chrX 153770474 153770503 -12879793 + AT_rich Low_complexity Low_complexity 1 29 0 4 1758 507 17 0 0 chrX 153770847 153770907 -12879389 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1758 416 329 93 9 chrX 153770974 153771189 -12879107 + MIR SINE MIR 21 253 -9 4 1758 349 330 110 0 chrX 153771345 153771463 -12878833 + B4A SINE B4 2 132 -160 4 1758 238 283 0 0 chrX 153771673 153771733 -12878563 - B4A SINE B4 -228 64 5 4 1758 1429 81 5 0 chrX 153771741 153771927 -12878369 - B2_Mm1t SINE B2 -6 187 1 4 1758 531 0 0 0 chrX 153772374 153772433 -12877863 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 1758 260 259 49 0 chrX 153772946 153773027 -12877269 + MER5A1 DNA MER1_type 2 86 -80 4 1758 1558 253 117 46 chrX 153774102 153774930 -12875366 + L1MA9 LINE L1 5261 6147 -165 4 1758 1174 256 129 10 chrX 153775015 153775470 -12874826 + RMER15 LTR ERVL 38 575 0 4 1758 426 208 83 0 chrX 153775494 153775614 -12874682 + L1MA9 LINE L1 6180 6309 -3 4 1758 264 185 0 0 chrX 153775615 153775669 -12874627 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 1758 685 276 66 31 chrX 153775679 153775937 -12874359 + L2 LINE L2 1269 1535 -1884 4 1758 8050 25 8 0 chrX 153776237 153777399 -12872897 + L1Md_F3 LINE L1 5391 6561 -23 4 1758 423 0 0 0 chrX 153777399 153777446 -12872850 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 1758 484 337 59 40 chrX 153778148 153778401 -12871895 - L3b LINE CR1 -55 427 170 4 1758 425 66 0 16 chrX 153779010 153779072 -12871224 + (CCCCCT)n Simple_repeat Simple_repeat 2 62 0 4 1758 321 125 0 0 chrX 153779072 153779128 -12871168 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 1758 490 260 23 40 chrX 153779165 153779341 -12870955 - L1MA7 LINE L1 -217 6074 5902 4 1758 458 268 56 0 chrX 153779356 153779535 -12870761 + L1MA7 LINE L1 6081 6269 -22 4 1758 248 333 81 32 chrX 153780300 153780424 -12869872 + MIRb SINE MIR 66 195 -73 4 1758 538 241 0 18 chrX 153780908 153781018 -12869278 - PB1D10 SINE Alu -7 110 3 4 1758 1022 205 14 28 chrX 153781027 153781243 -12869053 - B3 SINE B2 -2 214 2 4 1758 601 259 84 28 chrX 153781333 153781583 -12868713 - Charlie7 DNA MER1_type -1943 669 406 4 1758 735 305 22 38 chrX 153781600 153781917 -12868379 + Lx5 LINE L1 6097 6408 -642 4 1758 1278 261 88 17 chrX 153782088 153782442 -12867854 + MTE2b LTR MaLR 1 379 0 4 1758 854 141 68 73 chrX 153782476 153782500 -12867796 - B2_Mm2 SINE B2 -5 190 175 4 1758 1304 84 45 0 chrX 153782500 153782679 -12867617 + B2_Mm2 SINE B2 2 188 -7 4 1758 854 141 68 73 chrX 153782679 153782845 -12867451 - B2_Mm2 SINE B2 -21 174 1 4 1758 2216 106 16 3 chrX 153782998 153783321 -12866975 + ORR1A2 LTR MaLR 1 327 0 4 1758 386 287 54 27 chrX 153783409 153783556 -12866740 + MER5B DNA MER1_type 28 178 0 4 1758 4399 124 52 16 chrX 153783874 153784585 -12865711 + RMER19A LTR ERVK 1 737 0 4 1758 229 224 43 29 chrX 153785008 153785077 -12865219 - MIRb SINE MIR -95 173 104 4 1758 231 204 19 0 chrX 153785208 153785262 -12865034 + Lx2B LINE L1 6932 6986 -14 4 1758 306 0 0 0 chrX 153785262 153785296 -12865000 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 4 1758 380 360 67 11 chrX 153785320 153785500 -12864796 + MLT1J1 LTR MaLR 38 227 -217 4 1758 1189 68 0 0 chrX 153786588 153786735 -12863561 + B1_Mus1 SINE Alu 2 148 0 4 1758 594 162 20 0 chrX 153787021 153787120 -12863176 + B3A SINE B2 2 102 -96 4 1758 238 306 10 58 chrX 153787206 153787310 -12862986 + MER5A DNA MER1_type 63 161 -28 4 1758 674 284 72 75 chrX 153791521 153791814 -12858482 - B4 SINE B4 0 292 1 4 1758 495 65 95 21 chrX 153792232 153792327 -12857969 + L1Md_F2 LINE L1 6469 6570 -12 4 1758 689 201 14 29 chrX 153792350 153792488 -12857808 + B1_Mur2 SINE Alu 4 139 -10 4 1758 228 35 0 0 chrX 153792488 153792517 -12857779 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1758 1509 52 0 40 chrX 153792522 153792724 -12857572 + B2_Mm2 SINE B2 2 195 0 4 1758 291 157 0 0 chrX 153792892 153792943 -12857353 + A-rich Low_complexity Low_complexity 1 51 0 4 1758 417 259 0 0 chrX 153792971 153793052 -12857244 + ID4_ SINE ID 2 82 -1 4 1758 30653 102 11 12 chrX 153795149 153801134 -12849162 + L1_Mus1 LINE L1 591 6567 0 4 1758 1011 183 85 19 chrX 153801600 153801812 -12848484 - URR1A DNA MER1_type 0 226 1 4 1758 551 230 39 26 chrX 153801814 153801970 -12848326 + Lx4B LINE L1 6881 7038 -20 4 1758 495 0 0 0 chrX 153801971 153802026 -12848270 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 4 1758 514 178 33 25 chrX 153803497 153803618 -12846678 + Lx4A LINE L1 6937 7058 0 4 1758 21 0 0 0 chrX 153803621 153803642 -12846654 + AT_rich Low_complexity Low_complexity 1 21 0 4 1758 220 215 149 30 chrX 153804041 153804108 -12846188 + B1_Mus1 SINE Alu 29 103 -45 4 1758 500 239 66 51 chrX 153805566 153805703 -12844593 + B3 SINE B2 2 140 -76 4 1758 552 30 0 0 chrX 153805704 153805770 -12844526 + (TCC)n Simple_repeat Simple_repeat 3 68 0 4 1758 381 131 0 0 chrX 153805772 153805833 -12844463 + (TC)n Simple_repeat Simple_repeat 1 61 0 4 1758 270 391 74 11 chrX 153805886 153806062 -12844234 - B3A SINE B2 -7 191 5 4 1758 280 316 25 0 chrX 153806347 153806426 -12843870 + ID4 SINE ID 2 82 -1 4 1758 280 210 0 16 chrX 153807280 153807343 -12842953 + MER58D DNA MER1_type 324 385 -1 4 1758 768 296 42 5 chrX 153808140 153808330 -12841966 + ID_B1 SINE B4 1 197 -27 4 1758 333 68 0 0 chrX 153808338 153808382 -12841914 + (TATG)n Simple_repeat Simple_repeat 1 44 0 4 1758 592 261 7 21 chrX 153808714 153808855 -12841441 + ID_B1 SINE B4 81 219 -5 4 1758 590 289 0 77 chrX 153809551 153809673 -12840623 + B3A SINE B2 3 122 -76 4 1758 2975 68 5 10 chrX 153809673 153810071 -12840225 + MTA_Mm LTR MaLR 1 396 0 4 1758 590 290 3 77 chrX 153810071 153810173 -12840123 + B3A SINE B2 121 212 -4 4 1758 236 53 26 0 chrX 153811086 153811124 -12839172 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1758 210 250 0 0 chrX 153811263 153811307 -12838989 + GA-rich Low_complexity Low_complexity 4 47 0 4 1758 335 274 146 15 chrX 153811307 153811444 -12838852 + HAL1-3A_ME LINE L1 2284 2438 -420 4 1758 342 279 122 32 chrX 153811436 153811602 -12838694 + HAL1-3A_ME LINE L1 2284 2437 -421 4 1758 609 234 0 55 chrX 153811934 153812079 -12838217 - B3A SINE B2 0 198 62 4 1758 189 0 0 0 chrX 153812230 153812251 -12838045 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 4 1758 2065 117 38 38 chrX 153813001 153813348 -12836948 + Lx3B LINE L1 6619 6965 -8 4 1758 387 0 0 0 chrX 153813348 153813391 -12836905 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 4 1758 763 168 40 47 chrX 153813511 153813661 -12836635 + B1_Mur3 SINE Alu 1 149 0 4 1758 198 0 0 0 chrX 153813662 153813684 -12836612 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 4 1758 1123 66 0 0 chrX 153813754 153813891 -12836405 + B1_Mus1 SINE Alu 2 138 -10 4 1758 180 0 0 0 chrX 153813891 153813911 -12836385 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 1758 422 339 8 17 chrX 153813921 153814041 -12836255 + PB1D7 SINE Alu 1 119 -1 4 1758 248 374 73 47 chrX 153814060 153814293 -12836003 + MIRb SINE MIR 22 260 -8 4 1758 744 234 70 15 chrX 153814293 153814493 -12835803 + ID_B1 SINE B4 2 212 -12 4 1758 310 259 177 54 chrX 153814870 153815017 -12835279 - L1ME3A LINE L1 -17 6156 5992 4 1758 372 287 142 9 chrX 153815229 153815440 -12834856 - L1ME3A LINE L1 -921 5225 4987 4 1758 271 274 29 19 chrX 153815589 153815693 -12834603 + L1_Mur3 LINE L1 702 806 -6922 4 1758 607 158 294 29 chrX 153817396 153817566 -12832730 + B3 SINE B2 2 216 0 4 1758 1340 92 5 16 chrX 153817597 153817785 -12832511 + B2_Mm1t SINE B2 3 188 -5 4 1758 1205 178 26 11 chrX 153817836 153818109 -12832187 + L1_Mur3 LINE L1 2715 2991 -2889 4 1758 4430 12 2 0 chrX 153818138 153818630 -12831666 + MT2_Mm LTR ERVL 1 493 0 5 1758 1117 187 169 34 chrX 153818872 153819226 -12831070 + RLTR9E LTR ERVK 1 402 -7 5 1758 1204 42 0 0 chrX 153819334 153819478 -12830818 + B1_Mm SINE Alu 1 144 -3 5 1758 672 13 0 0 chrX 153819486 153819563 -12830733 + (GAA)n Simple_repeat Simple_repeat 2 78 0 5 1758 799 179 125 41 chrX 153819563 153819793 -12830503 - Lx6 LINE L1 -210 7250 7022 5 1758 568 151 0 8 chrX 153819798 153819918 -12830378 - L1_Mur3 LINE L1 -2564 3316 3198 5 1758 289 183 122 0 chrX 153819968 153820050 -12830246 + Lx7 LINE L1 7605 7696 0 5 1758 856 136 12 87 chrX 153820081 153820242 -12830054 + B1_Mur4 SINE Alu 1 149 -1 5 1758 238 0 53 26 chrX 153820301 153820339 -12829957 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 1758 1143 66 0 0 chrX 153820339 153820476 -12829820 - B1_Mus2 SINE Alu -10 137 1 5 1758 474 18 0 0 chrX 153821508 153821563 -12828733 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1758 520 313 47 0 chrX 153822558 153822708 -12827588 - MER5A DNA MER1_type -31 158 2 5 1758 330 26 0 0 chrX 153822843 153822882 -12827414 + (TC)n Simple_repeat Simple_repeat 2 40 0 5 1758 226 362 0 0 chrX 153822883 153822963 -12827333 + (TATATG)n Simple_repeat Simple_repeat 1 80 0 5 1758 333 68 0 0 chrX 153823009 153823053 -12827243 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1758 360 344 31 49 chrX 153823144 153823241 -12827055 - B4A SINE B4 -127 165 76 5 1758 1570 218 45 6 chrX 153823241 153823597 -12826699 - ORR1D1 LTR MaLR 0 374 5 5 1758 360 344 31 49 chrX 153823597 153823661 -12826635 - B4A SINE B4 -217 75 7 5 1758 499 244 10 0 chrX 153823656 153823760 -12826536 - B4 SINE B4 -66 226 116 5 1758 580 289 82 82 chrX 153823863 153824082 -12826214 - ID_B1 SINE B4 0 224 6 5 1758 512 315 82 25 chrX 153824955 153825271 -12825025 + L2 LINE L2 2735 3068 -351 5 1758 195 333 54 77 chrX 153825328 153825458 -12824838 + MIRc SINE MIR 82 208 -60 5 1758 503 232 128 196 chrX 153825713 153825917 -12824379 - B3A SINE B2 -2 196 1 5 1758 302 317 65 28 chrX 153826638 153826745 -12823551 + PB1 SINE Alu 15 125 -2 5 1758 358 155 24 134 chrX 153826755 153826837 -12823459 + ID4_ SINE ID 1 73 -10 5 1758 493 300 226 22 chrX 153826870 153827371 -12822925 + Kanga1a DNA Tc2 4 606 -148 5 1758 1078 124 12 0 chrX 153827387 153827548 -12822748 + B2_Mm1t SINE B2 17 179 -14 5 1758 240 328 138 29 chrX 153827588 153827726 -12822570 + Kanga1a DNA Tc2 601 753 -1 5 1758 369 109 0 0 chrX 153827891 153827955 -12822341 + (CA)n Simple_repeat Simple_repeat 2 65 0 5 1758 183 80 0 0 chrX 153827995 153828020 -12822276 + (TCC)n Simple_repeat Simple_repeat 2 26 0 5 1758 588 40 0 0 chrX 153829632 153829707 -12820589 + (GGGA)n Simple_repeat Simple_repeat 2 76 0 5 1758 344 296 100 38 chrX 153830248 153830487 -12819809 - Charlie4a DNA MER1_type -102 406 153 5 1758 1239 21 0 7 chrX 153830641 153830787 -12819509 + B1_Mm SINE Alu 1 145 -2 5 1758 298 290 126 35 chrX 153830906 153831049 -12819247 + MLT1A0 LTR MaLR 210 365 0 5 1758 1348 213 186 39 chrX 153832247 153832396 -12817900 + Lx4B LINE L1 6501 6646 -412 5 1758 1265 34 0 0 chrX 153832396 153832543 -12817753 + B1_Mm SINE Alu 1 147 0 5 1758 1348 213 186 39 chrX 153832543 153832570 -12817726 + Lx4B LINE L1 6647 6683 -375 5 1758 1179 65 6 12 chrX 153832570 153832742 -12817554 + (GGAGA)n Simple_repeat Simple_repeat 2 172 0 5 1758 621 0 0 0 chrX 153832742 153832811 -12817485 + (GAAAA)n Simple_repeat Simple_repeat 1 69 0 5 1758 1507 211 186 39 chrX 153832811 153833115 -12817181 + Lx4B LINE L1 6684 7053 -5 5 1758 2163 29 0 0 chrX 153833530 153833770 -12816526 + L1Md_A LINE L1 6343 6582 0 5 1758 1893 108 4 4 chrX 153833996 153834257 -12816039 + Lx4A LINE L1 6798 7058 0 5 1758 316 272 16 66 chrX 153834330 153834452 -12815844 - RLTR42-int LTR ERVK -4136 1386 1271 5 1758 339 211 17 133 chrX 153834944 153835064 -12815232 + B1F SINE Alu 44 149 0 5 1758 543 315 26 18 chrX 153836202 153836428 -12813868 - MIRb SINE MIR -15 253 26 5 1758 304 404 58 12 chrX 153836537 153836780 -12813516 + L1M5 LINE L1 3592 3845 -2301 5 1758 754 308 13 13 chrX 153837145 153837369 -12812927 - MER58A DNA MER1_type 0 224 1 5 1758 242 145 79 16 chrX 153837382 153837445 -12812851 + (CAGAGA)n Simple_repeat Simple_repeat 6 72 0 5 1758 303 325 64 13 chrX 153837486 153837642 -12812654 + L1M5 LINE L1 5561 5724 -400 5 1758 571 317 75 29 chrX 153837818 153838097 -12812199 + B4A SINE B4 1 292 0 5 1758 250 231 0 0 chrX 153838098 153838150 -12812146 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1758 5062 156 24 15 chrX 153838204 153839161 -12811135 + Lx2 LINE L1 5934 6776 -221 5 1758 1319 34 0 0 chrX 153839575 153839722 -12810574 + B1_Mus2 SINE Alu 1 147 0 5 1758 961 208 16 5 chrX 153839747 153839931 -12810365 + B3 SINE B2 27 212 -4 5 1758 1175 83 112 6 chrX 153840179 153840348 -12809948 + B2_Mm2 SINE B2 1 187 -8 5 1758 414 293 0 0 chrX 153842012 153842111 -12808185 - PB1D7 SINE Alu -12 108 10 5 1758 244 337 0 35 chrX 153842038 153842124 -12808172 - ID_B1 SINE B4 -64 160 78 5 1758 399 237 138 6 chrX 153842621 153842637 -12807659 - ID_B1 SINE B4 0 224 158 5 1758 434 236 160 0 chrX 153842637 153842743 -12807553 - B1F SINE Alu -24 125 3 5 1758 399 237 138 6 chrX 153842743 153842760 -12807536 - ID_B1 SINE B4 0 157 75 5 1758 1192 206 165 13 chrX 153843790 153844105 -12806191 - MTD LTR MaLR 0 419 57 5 1758 1227 50 0 0 chrX 153844533 153844672 -12805624 - B1_Mus1 SINE Alu -8 140 2 5 1758 212 378 47 7 chrX 153844678 153844827 -12805469 - MIR SINE MIR -74 188 34 5 1758 180 0 0 0 chrX 153845732 153845752 -12804544 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1758 190 328 47 0 chrX 153845807 153845871 -12804425 + MIR SINE MIR 35 101 -161 5 1758 1144 64 0 60 chrX 153845896 153846045 -12804251 + B1_Mus1 SINE Alu 3 142 -6 5 1758 369 0 0 0 chrX 153846046 153846087 -12804209 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 5 1758 536 216 78 0 chrX 153846518 153846620 -12803676 - B1_Mur1 SINE Alu -38 111 2 5 1758 360 222 53 43 chrX 153846870 153846964 -12803332 - PB1D10 SINE Alu -12 105 11 5 1758 686 263 32 0 chrX 153846894 153847050 -12803246 - ID_B1 SINE B4 -63 161 1 5 1758 216 0 0 0 chrX 153847062 153847086 -12803210 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1758 274 259 100 18 chrX 153848214 153848324 -12801972 + MER5A DNA MER1_type 20 138 -51 5 1758 658 237 12 37 chrX 153848498 153848660 -12801636 + RMER30 DNA MER1_type 40 197 -5 5 1758 37 23 0 0 chrX 153849317 153849361 -12800935 + AT_rich Low_complexity Low_complexity 1 44 0 5 1758 213 39 0 0 chrX 153849402 153849428 -12800868 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1758 1228 27 0 64 chrX 153849428 153849585 -12800711 - B1_Mm SINE Alu 0 147 1 5 1758 581 323 78 22 chrX 153849768 153850073 -12800223 + MER58B DNA MER1_type 14 341 0 5 1758 388 228 208 0 chrX 153850486 153850587 -12799709 + B1F2 SINE Alu 5 126 -23 5 1758 336 102 0 0 chrX 153850603 153850652 -12799644 + (CAGG)n Simple_repeat Simple_repeat 2 50 0 5 1758 894 106 0 0 chrX 153850829 153850961 -12799335 + (GAAAA)n Simple_repeat Simple_repeat 2 133 0 5 1758 189 0 0 0 chrX 153851229 153851250 -12799046 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1758 813 124 8 15 chrX 153854035 153854166 -12796130 + B1_Mus1 SINE Alu 19 148 0 5 1758 206 310 46 35 chrX 153854365 153854452 -12795844 + L2a LINE L2 3305 3392 -34 5 1758 1225 55 0 0 chrX 153854503 153854648 -12795648 + B1_Mm SINE Alu 1 145 -2 5 1758 291 54 0 0 chrX 153854648 153854685 -12795611 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 5 1758 786 22 0 0 chrX 153855231 153855323 -12794973 + (GAA)n Simple_repeat Simple_repeat 1 92 0 5 1758 208 290 0 48 chrX 153856357 153856423 -12793873 + A-rich Low_complexity Low_complexity 1 63 0 5 1758 1594 47 0 0 chrX 153856423 153856651 -12793645 + L1_Mus2 LINE L1 6377 6566 0 5 1758 926 193 161 5 chrX 153856834 153857027 -12793269 - URR1B DNA MER1_type -2 223 1 5 1758 315 250 0 42 chrX 153857128 153857199 -12793097 + ID_B1 SINE B4 82 149 -75 5 1758 233 240 12 96 chrX 153857199 153857211 -12793085 + PB1D7 SINE Alu 1 76 -44 5 1758 315 71 0 0 chrX 153857211 153857253 -12793043 + (GGGA)n Simple_repeat Simple_repeat 4 45 0 5 1758 399 317 33 5 chrX 153857640 153857792 -12792504 - MIRb SINE MIR -81 187 21 5 1758 538 309 142 40 chrX 153858515 153859037 -12791259 - MER74B LTR ERVL -3 619 45 5 1758 381 43 0 0 chrX 153859045 153859092 -12791204 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1758 657 252 49 0 chrX 153859371 153859514 -12790782 - MER5A DNA MER1_type -39 150 1 5 1758 281 298 67 9 chrX 153859653 153859758 -12790538 + ORR1D1 LTR MaLR 1 111 -248 5 1758 242 330 164 5 chrX 153860015 153860210 -12790086 + MamRep38 DNA hAT 70 295 0 5 1758 429 20 0 0 chrX 153860252 153860302 -12789994 + (TTGG)n Simple_repeat Simple_repeat 2 51 0 5 1758 843 197 0 13 chrX 153860302 153860443 -12789853 - B1_Mus1 SINE Alu -8 140 2 5 1758 1316 94 33 0 chrX 153860780 153860960 -12789336 + L1Md_F2 LINE L1 6383 6568 -14 5 1758 587 175 25 0 chrX 153861054 153861174 -12789122 + ORR1D1 LTR MaLR 250 372 -2 5 1758 391 327 89 110 chrX 153861256 153861718 -12788578 + LTR33A LTR ERVL 69 496 -24 5 1758 438 306 118 9 chrX 153861806 153862017 -12788279 + MIR SINE MIR 1 234 -28 5 1758 346 310 123 8 chrX 153862120 153862250 -12788046 + RSINE1 SINE B4 3 147 -18 5 1758 242 314 168 8 chrX 153862455 153862472 -12787824 - B4A SINE B4 -67 225 88 5 1758 345 287 103 0 chrX 153862472 153862574 -12787722 - B1F2 SINE Alu -32 117 3 5 1758 2724 123 13 10 chrX 153863068 153863461 -12786835 - ORR1B1 LTR MaLR 0 394 1 6 1758 21 36 0 0 chrX 153863644 153863672 -12786624 + AT_rich Low_complexity Low_complexity 1 28 0 6 1758 1701 27 11 0 chrX 153863673 153863860 -12786436 - B2_Mm1a SINE B2 -3 190 2 6 1758 418 294 70 6 chrX 153863952 153864123 -12786173 - MER115 DNA Tip100 -103 590 409 6 1758 324 323 113 0 chrX 153864259 153864392 -12785904 - MER115 DNA Tip100 -538 155 8 6 1758 22 35 0 0 chrX 153864607 153864636 -12785660 + AT_rich Low_complexity Low_complexity 1 29 0 6 1758 495 0 0 0 chrX 153865875 153865930 -12784366 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 6 1758 730 236 13 7 chrX 153865931 153866080 -12784216 - B1_Mur4 SINE Alu 0 150 1 6 1758 470 250 108 15 chrX 153866525 153866644 -12783652 + ID_B1 SINE B4 81 212 -12 6 1758 546 57 0 0 chrX 153866644 153866714 -12783582 + (GGGA)n Simple_repeat Simple_repeat 3 72 0 6 1758 224 271 155 14 chrX 153866922 153866993 -12783303 - ID4_ SINE ID 0 83 3 6 1758 458 212 0 0 chrX 153868452 153868532 -12781764 + B4A SINE B4 7 86 -206 6 1758 2338 231 170 36 chrX 153869029 153870345 -12779951 + RMER1B Other Other 1 1052 -14 6 1758 284 329 0 0 chrX 153870368 153870441 -12779855 + B4A SINE B4 112 184 -108 6 1758 317 298 47 54 chrX 153870504 153870653 -12779643 - RMER15 LTR ERVL -5 570 423 6 1758 187 344 10 40 chrX 153871717 153871817 -12778479 - L2a LINE L2 -11 3415 3319 6 1758 652 234 27 140 chrX 153872093 153872415 -12777881 + L1M2 LINE L1 5490 5779 -518 6 1758 496 332 64 105 chrX 153873356 153873510 -12776786 - MLT1C LTR MaLR 0 467 241 6 1758 903 60 0 0 chrX 153873510 153873626 -12776670 - B1_Mm SINE Alu 0 147 32 6 1758 496 332 64 105 chrX 153873626 153873695 -12776601 - MLT1C LTR MaLR 0 240 137 6 1758 1723 27 0 5 chrX 153873695 153873884 -12776412 - B2_Mm1a SINE B2 -4 189 2 6 1758 496 332 64 105 chrX 153873884 153874031 -12776265 - MLT1C LTR MaLR -331 136 1 6 1758 619 203 42 42 chrX 153874248 153874392 -12775904 - RSINE1 SINE B4 -20 145 2 6 1758 22 35 0 0 chrX 153875354 153875383 -12774913 + AT_rich Low_complexity Low_complexity 1 29 0 6 1758 602 221 132 10 chrX 153875403 153875572 -12774724 - B3A SINE B2 -22 173 2 6 1758 398 259 90 67 chrX 153875829 153875848 -12774448 - B2_Mm1a SINE B2 -11 182 164 6 1758 360 64 0 0 chrX 153875848 153875895 -12774401 + (TATG)n Simple_repeat Simple_repeat 2 48 0 6 1758 636 219 89 44 chrX 153875895 153876053 -12774243 - B3 SINE B2 -51 165 1 6 1758 299 212 94 0 chrX 153876250 153876335 -12773961 - L1MC4 LINE L1 -618 7424 7332 6 1758 350 306 91 91 chrX 153876559 153876698 -12773598 + MLT1D LTR MaLR 256 409 -96 6 1758 1739 16 5 0 chrX 153876698 153876884 -12773412 - B2_Mm1a SINE B2 -5 188 2 6 1758 350 306 91 91 chrX 153876884 153876931 -12773365 + MLT1D LTR MaLR 410 442 -63 6 1758 505 286 171 0 chrX 153877191 153877331 -12772965 - B3A SINE B2 0 198 35 6 1758 426 284 110 0 chrX 153878228 153878355 -12771941 + B3A SINE B2 23 163 -35 6 1759 575 265 82 10 chrX 153879163 153879417 -12770879 + Charlie4a DNA MER1_type 59 330 -178 6 1759 252 238 103 56 chrX 153879455 153879562 -12770734 + Charlie4a DNA MER1_type 396 507 -1 6 1759 824 253 62 5 chrX 153879566 153879761 -12770535 + B3 SINE B2 1 206 -10 6 1759 300 300 62 26 chrX 153879818 153879931 -12770365 + B1F SINE Alu 33 149 0 6 1759 324 203 77 15 chrX 153879935 153880000 -12770296 + ID4_ SINE ID 6 74 -9 6 1759 369 299 148 8 chrX 153880082 153880210 -12770086 + ID_B1 SINE B4 79 224 0 6 1759 256 233 0 48 chrX 153880393 153880455 -12769841 + B3A SINE B2 1 59 -139 6 1759 1539 138 127 3 chrX 153880455 153880508 -12769788 + ORR1A2 LTR MaLR 1 61 -266 6 1759 2953 58 8 0 chrX 153880508 153880870 -12769426 + L1Md_F2 LINE L1 6218 6582 0 6 1759 1539 138 127 3 chrX 153880870 153881100 -12769196 + ORR1A2 LTR MaLR 62 318 -9 6 1759 526 294 71 0 chrX 153881099 153881225 -12769071 + B3A SINE B2 48 182 -16 6 1759 947 118 34 14 chrX 153881509 153881655 -12768641 + B1_Mur4 SINE Alu 2 150 0 6 1759 379 234 10 42 chrX 153882634 153882739 -12767557 + B1F SINE Alu 7 141 -8 6 1759 28 0 0 0 chrX 153883933 153883961 -12766335 + AT_rich Low_complexity Low_complexity 1 28 0 6 1759 510 265 106 35 chrX 153885895 153886036 -12764260 - RSINE1 SINE B4 -2 163 13 6 1759 571 213 43 29 chrX 153887075 153887215 -12763081 + B1_Mur1 SINE Alu 5 146 -3 6 1759 560 278 5 58 chrX 153887215 153887406 -12762890 + B3A SINE B2 2 182 -16 6 1759 21 71 0 0 chrX 153887415 153887457 -12762839 + AT_rich Low_complexity Low_complexity 1 42 0 6 1759 440 152 304 0 chrX 153887532 153887624 -12762672 + B3A SINE B2 2 121 -77 6 1759 619 283 14 20 chrX 153887672 153887820 -12762476 - B1_Mm SINE Alu 0 147 1 6 1759 1608 37 5 5 chrX 153887895 153888084 -12762212 + B2_Mm1a SINE B2 2 190 -3 6 1759 216 0 0 0 chrX 153888084 153888108 -12762188 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 6 1759 1512 53 26 5 chrX 153888117 153888306 -12761990 + B2_Mm2 SINE B2 1 193 -2 6 1759 551 281 16 8 chrX 153888322 153888444 -12761852 + B3A SINE B2 45 167 -31 6 1759 303 188 132 33 chrX 153889035 153889217 -12761079 + RMER17C LTR ERVK 71 270 -140 6 1759 282 56 0 0 chrX 153889236 153889272 -12761024 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 6 1759 249 293 0 42 chrX 153889676 153889711 -12760585 - ID_B1 SINE B4 -118 174 102 6 1759 255 276 0 17 chrX 153889711 153889770 -12760526 - B1F1 SINE Alu -89 60 3 6 1759 249 293 0 42 chrX 153889770 153889782 -12760514 - ID_B1 SINE B4 -118 101 73 6 1759 585 252 66 22 chrX 153890695 153890967 -12759329 + L1MA6 LINE L1 6017 6300 0 6 1759 1420 246 121 31 chrX 153890997 153891484 -12758812 + Lx9 LINE L1 7065 7595 -49 6 1759 686 269 21 0 chrX 153891510 153891703 -12758593 + B3A SINE B2 2 198 0 6 1759 324 70 0 0 chrX 153891711 153891754 -12758542 + (GGGGA)n Simple_repeat Simple_repeat 5 47 0 6 1759 216 86 0 0 chrX 153892114 153892149 -12758147 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 6 1759 1242 27 0 7 chrX 153892156 153892303 -12757993 - B1_Mm SINE Alu -1 146 1 6 1759 183 49 0 68 chrX 153892510 153892554 -12757742 + (CAAAC)n Simple_repeat Simple_repeat 2 42 0 6 1759 337 253 23 11 chrX 153892915 153893003 -12757293 + ID_B1 SINE B4 134 222 -2 6 1759 341 236 14 0 chrX 153893170 153893242 -12757054 + ID4 SINE ID 1 73 -10 6 1759 28 0 0 0 chrX 153893292 153893320 -12756976 + AT_rich Low_complexity Low_complexity 1 28 0 6 1759 665 276 99 15 chrX 153893338 153893610 -12756686 + RMER5 LTR ERV1 229 523 -11 6 1759 276 97 6 34 chrX 153893608 153893667 -12756629 + ORR1A4 LTR MaLR 20 111 -283 6 1759 234 296 49 12 chrX 153893682 153893764 -12756532 + PB1 SINE Alu 1 85 -42 6 1759 318 276 26 79 chrX 153893752 153893866 -12756430 + B4A SINE B4 184 291 -1 6 1759 1053 110 7 0 chrX 153894207 153894353 -12755943 + B1_Mus1 SINE Alu 2 148 0 6 1759 1214 95 16 16 chrX 153894357 153894515 -12755781 + B2_Mm1t SINE B2 1 158 -35 6 1759 450 0 0 0 chrX 153894515 153894565 -12755731 + (TAAA)n Simple_repeat Simple_repeat 1 50 0 6 1759 1214 95 16 16 chrX 153894565 153894599 -12755697 + B2_Mm1t SINE B2 159 193 0 6 1759 360 0 0 0 chrX 153894599 153894639 -12755657 + (GAAAA)n Simple_repeat Simple_repeat 1 40 0 6 1759 408 287 16 80 chrX 153895934 153896059 -12754237 - B4 SINE B4 -175 117 1 6 1759 1096 95 0 0 chrX 153896150 153896298 -12753998 + B1_Mus1 SINE Alu 1 148 0 6 1759 342 115 0 0 chrX 153896340 153896392 -12753904 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1759 274 196 0 51 chrX 153896399 153896458 -12753838 - RSINE1 SINE B4 -99 66 11 6 1759 208 0 62 0 chrX 153896677 153896709 -12753587 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1759 228 67 0 0 chrX 153896718 153896748 -12753548 + (GGAAA)n Simple_repeat Simple_repeat 1 30 0 6 1759 1092 82 0 7 chrX 153897324 153897471 -12752825 + B1_Mus2 SINE Alu 1 146 -1 6 1759 336 102 0 0 chrX 153897478 153897527 -12752769 + PB1D9 SINE Alu 5 53 -67 6 1759 210 254 62 16 chrX 153898004 153898068 -12752228 + ID4_ SINE ID 17 83 0 6 1759 213 93 73 18 chrX 153898801 153898856 -12751440 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 6 1759 466 279 99 16 chrX 153898890 153899072 -12751224 - B3 SINE B2 -15 201 5 6 1759 183 42 0 0 chrX 153899378 153899402 -12750894 + (TTG)n Simple_repeat Simple_repeat 1 24 0 6 1759 406 261 169 19 chrX 153900156 153900316 -12749980 + B3A SINE B2 1 184 -14 6 1759 1180 62 0 0 chrX 153901277 153901423 -12748873 + B1_Mus2 SINE Alu 2 147 0 6 1759 21 0 0 0 chrX 153901577 153901598 -12748698 + AT_rich Low_complexity Low_complexity 1 21 0 6 1759 210 300 178 37 chrX 153901598 153901733 -12748563 + RSINE1 SINE B4 12 165 0 6 1759 189 0 0 0 chrX 153901733 153901754 -12748542 + (CA)n Simple_repeat Simple_repeat 1 21 0 6 1759 1062 78 0 46 chrX 153902399 153902574 -12747722 + B2_Mm2 SINE B2 2 168 -27 6 1759 216 0 0 0 chrX 153904976 153905000 -12745296 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1759 350 268 17 67 chrX 153905010 153905130 -12745166 - Lx8 LINE L1 -239 7234 7121 6 1759 5899 43 3 11 chrX 153905296 153906019 -12744277 + L1Md_F3 LINE L1 5854 6570 -14 6 1759 427 272 5 0 chrX 153906310 153906421 -12743875 + B3 SINE B2 3 117 -81 6 1759 238 250 36 0 chrX 153907045 153907101 -12743195 - L1MA5 LINE L1 -364 5936 5879 6 1759 205 208 77 161 chrX 153907154 153907235 -12743061 + MER5A DNA MER1_type 29 110 -79 6 1759 324 0 0 0 chrX 153907235 153907271 -12743025 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1759 205 208 77 161 chrX 153907271 153907332 -12742964 + MER5A DNA MER1_type 111 159 -30 6 1759 322 309 0 30 chrX 153907533 153907633 -12742663 + ID_B1 SINE B4 36 132 -92 6 1759 257 91 45 0 chrX 153907665 153907709 -12742587 + (GAAA)n Simple_repeat Simple_repeat 2 47 0 6 1759 646 162 85 35 chrX 153907715 153907856 -12742440 + B1_Mus1 SINE Alu 1 148 0 7 1759 21 0 0 0 chrX 153908515 153908536 -12741760 + AT_rich Low_complexity Low_complexity 1 21 0 7 1759 504 198 9 9 chrX 153908685 153908797 -12741499 + B1F SINE Alu 37 148 -1 7 1759 1469 74 16 0 chrX 153909026 153909216 -12741080 + B2_Mm2 SINE B2 1 193 -2 7 1759 189 0 0 0 chrX 153909217 153909238 -12741058 + (CAA)n Simple_repeat Simple_repeat 2 22 0 7 1759 499 281 20 14 chrX 153909586 153909734 -12740562 + Charlie8 DNA MER1_type 1618 1766 -662 7 1759 964 174 13 90 chrX 153909742 153909976 -12740320 + B3 SINE B2 1 216 0 7 1759 207 0 0 0 chrX 153910803 153910826 -12739470 + (A)n Simple_repeat Simple_repeat 1 23 0 7 1759 286 254 0 0 chrX 153911011 153911074 -12739222 + MER5B DNA MER1_type 2 64 -114 7 1759 2449 79 0 6 chrX 153911220 153911539 -12738757 + L1_Mus4 LINE L1 6298 6614 -22 7 1759 1180 50 0 7 chrX 153911548 153911690 -12738606 + B1_Mm SINE Alu 1 141 -6 7 1759 195 42 0 0 chrX 153911692 153911716 -12738580 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 7 1759 696 234 52 37 chrX 153911799 153911990 -12738306 + B3 SINE B2 23 216 0 7 1759 1174 56 0 7 chrX 153911995 153912139 -12738157 + B1_Mm SINE Alu 1 143 -4 7 1759 354 45 0 0 chrX 153912142 153912186 -12738110 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 7 1759 213 172 15 30 chrX 153912443 153912509 -12737787 + GA-rich Low_complexity Low_complexity 2 66 0 7 1759 722 280 79 43 chrX 153912572 153912852 -12737444 + B4 SINE B4 3 292 0 7 1759 261 0 0 0 chrX 153914181 153914210 -12736086 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 1759 517 260 167 60 chrX 153914264 153914632 -12735664 + L1MB7 LINE L1 5704 6110 -74 7 1759 688 247 35 23 chrX 153915000 153915174 -12735122 + B3A SINE B2 5 180 -18 7 1759 445 202 67 9 chrX 153916272 153916377 -12733919 + RSINE1 SINE B4 12 122 -43 7 1759 1344 194 91 60 chrX 153916469 153916853 -12733443 - Lx9 LINE L1 0 7644 7249 7 1759 235 250 71 0 chrX 153916887 153916943 -12733353 + B3 SINE B2 57 116 -100 7 1759 1570 141 110 25 chrX 153916943 153917310 -12732986 + RMER16 LTR ERVK 1 520 -13 7 1759 1582 43 5 0 chrX 153917534 153917719 -12732577 - B2_Mm1a SINE B2 -7 186 1 7 1759 945 178 115 29 chrX 153917725 153917933 -12732363 - URR1A DNA MER1_type 0 226 1 7 1759 324 346 55 8 chrX 153917933 153918061 -12732235 + RSINE1 SINE B4 17 150 -15 7 1759 894 249 195 34 chrX 153918246 153918774 -12731522 - L1MD LINE L1 -2040 4106 3494 7 1759 304 259 35 47 chrX 153918834 153918919 -12731377 - RSINE1 SINE B4 -79 86 3 7 1759 274 255 40 50 chrX 153919009 153919108 -12731188 - L1MC LINE L1 -2740 3406 3309 7 1759 1177 55 7 0 chrX 153919228 153919374 -12730922 - B1_Mus2 SINE Alu 0 147 1 7 1759 311 265 191 45 chrX 153919755 153919933 -12730363 + MER58C DNA MER1_type 1 204 -11 7 1759 610 164 19 0 chrX 153920460 153920564 -12729732 + B1_Mur1 SINE Alu 30 135 -14 7 1759 256 257 0 14 chrX 153920786 153920857 -12729439 - PB1D7 SINE Alu -49 71 2 7 1759 1038 183 0 128 chrX 153921221 153921478 -12728818 + URR1B DNA MER1_type 1 224 -1 7 1759 439 220 11 0 chrX 153921478 153921561 -12728735 + B1_Mur2 SINE Alu 65 148 -1 7 1759 302 217 50 0 chrX 153921711 153921771 -12728525 - RSINE1 SINE B4 -43 122 60 7 1759 1424 63 15 45 chrX 153923757 153923956 -12726340 + B2_Mm2 SINE B2 2 194 -1 7 1759 879 40 95 0 chrX 153924095 153924221 -12726075 - B1_Mus2 SINE Alu 0 147 10 7 1759 311 265 41 25 chrX 153924868 153924982 -12725314 - B3A SINE B2 -53 140 23 7 1759 180 0 0 0 chrX 153924988 153925008 -12725288 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 1759 455 168 98 74 chrX 153925014 153925136 -12725160 - B1_Mur3 SINE Alu 0 149 25 7 1759 468 231 206 0 chrX 153925723 153925883 -12724413 - ID_B1 SINE B4 0 224 32 7 1759 225 310 86 26 chrX 153926323 153926439 -12723857 + Charlie4a DNA MER1_type 2 124 -384 7 1759 604 226 55 50 chrX 153926860 153927060 -12723236 + Charlie13b DNA Charlie 256 456 -56 7 1759 274 23 23 23 chrX 153927065 153927109 -12723187 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 7 1759 1036 61 45 0 chrX 153927364 153927496 -12722800 - B1_Mus1 SINE Alu -10 138 1 7 1759 393 208 99 20 chrX 153927501 153927624 -12722672 - PB1D9 SINE Alu -15 132 11 7 1759 291 184 219 38 chrX 153927847 153927962 -12722334 - B1_Mur4 SINE Alu -13 137 11 7 1759 27 49 0 0 chrX 153929550 153929591 -12720705 + GC_rich Low_complexity Low_complexity 1 41 0 7 1759 429 109 0 0 chrX 153929739 153929803 -12720493 + (CCG)n Simple_repeat Simple_repeat 3 66 0 7 1759 23 0 0 0 chrX 153930032 153930055 -12720241 + GC_rich Low_complexity Low_complexity 1 23 0 7 1759 288 53 0 0 chrX 153930905 153930943 -12719353 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 7 1759 350 200 0 0 chrX 153931641 153931701 -12718595 + B1_Mur4 SINE Alu 1 60 -90 7 1759 1417 107 115 4 chrX 153931729 153931973 -12718323 + ORR1B1 LTR MaLR 99 369 -25 7 1759 485 318 74 68 chrX 153932233 153932249 -12718047 + ORR1E LTR MaLR 2 13 -346 7 1759 2016 181 25 0 chrX 153932249 153932614 -12717682 + ORR1D1 LTR MaLR 1 374 0 7 1759 485 318 74 68 chrX 153932614 153932948 -12717348 + ORR1E LTR MaLR 14 354 -5 7 1759 1032 283 122 5 chrX 153933149 153933582 -12716714 + MER90a LTR ERV1 124 607 -7 7 1759 205 237 0 0 chrX 153933841 153933879 -12716417 + (TGG)n Simple_repeat Simple_repeat 3 40 0 7 1759 365 236 62 54 chrX 153934316 153934446 -12715850 - MER5B DNA MER1_type -3 175 45 7 1759 28 0 0 0 chrX 153934667 153934695 -12715601 + AT_rich Low_complexity Low_complexity 1 28 0 7 1759 376 214 0 0 chrX 153934716 153934786 -12715510 + ID4_ SINE ID 12 81 -2 7 1759 242 301 48 0 chrX 153934720 153934803 -12715493 + B4 SINE B4 16 102 -190 7 1759 500 269 88 34 chrX 153934811 153935015 -12715281 + L1M4 LINE L1 5610 5824 -350 7 1759 1597 145 0 7 chrX 153935031 153935302 -12714994 + RMER19A LTR ERVK 1 269 -468 7 1759 646 144 44 74 chrX 153935303 153935438 -12714858 + MT2B LTR ERVL 157 287 -314 7 1759 4108 124 20 16 chrX 153935406 153936143 -12714153 + ORR1A3-int LTR MaLR 727 1466 -497 7 1759 183 42 0 0 chrX 153936217 153936241 -12714055 + (CAA)n Simple_repeat Simple_repeat 2 25 0 7 1759 386 164 148 11 chrX 153936758 153936868 -12713428 + B1F2 SINE Alu 14 148 -1 7 1759 808 269 71 0 chrX 153936906 153937103 -12713193 + B3 SINE B2 1 211 -5 7 1759 506 248 17 8 chrX 153937170 153937288 -12713008 + PB1 SINE Alu 9 127 0 7 1759 350 255 50 30 chrX 153937420 153937521 -12712775 + L1MC4 LINE L1 7383 7485 -557 7 1759 378 0 0 0 chrX 153937563 153937605 -12712691 + (GA)n Simple_repeat Simple_repeat 1 42 0 7 1759 436 274 61 128 chrX 153937707 153937765 -12712531 + L1MC4 LINE L1 7537 7588 -454 7 1759 1223 48 0 0 chrX 153937765 153937912 -12712384 + B1_Mus2 SINE Alu 1 147 0 7 1759 436 274 61 128 chrX 153937912 153938150 -12712146 + L1MC4 LINE L1 7589 7813 -229 7 1759 288 292 30 114 chrX 153938206 153938327 -12711969 + L1MC4 LINE L1 7804 7909 -133 7 1759 1259 117 91 10 chrX 153938327 153938535 -12711761 + URR1B DNA MER1_type 1 225 0 7 1759 288 292 30 114 chrX 153938535 153938614 -12711682 + L1MC4 LINE L1 7910 7987 -55 7 1759 247 311 36 29 chrX 153938656 153938670 -12711626 + MT2B LTR ERVL 152 194 -407 7 1759 422 227 62 0 chrX 153938670 153938767 -12711529 + B1_Mm SINE Alu 1 103 -44 7 1759 247 311 36 29 chrX 153938767 153938795 -12711501 + MT2B LTR ERVL 195 291 -310 7 1759 280 270 191 0 chrX 153938770 153938885 -12711411 + B3 SINE B2 80 216 0 7 1759 550 202 70 31 chrX 153938893 153939021 -12711275 + B1_Mur2 SINE Alu 1 133 -16 7 1759 217 51 25 25 chrX 153939024 153939064 -12711232 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 7 1759 231 36 0 0 chrX 153939525 153939553 -12710743 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 1759 267 204 0 0 chrX 153939558 153939612 -12710684 - ID4 SINE ID -29 54 1 7 1759 230 173 0 19 chrX 153940274 153940327 -12709969 - Charlie5 DNA MER1_type -27 2597 2546 7 1759 642 181 0 0 chrX 153940327 153940443 -12709853 + B3 SINE B2 1 116 -100 7 1759 2160 158 32 25 chrX 153940445 153940853 -12709443 + MTC LTR MaLR 3 413 -8 7 1759 446 231 14 76 chrX 153940820 153940965 -12709331 + B3 SINE B2 78 213 -3 7 1759 610 271 143 26 chrX 153941036 153941267 -12709029 - Lx5 LINE L1 -639 6411 6154 7 1759 1217 232 44 7 chrX 153941268 153941646 -12708650 - Lx5 LINE L1 -578 6882 6466 7 1759 382 272 0 70 chrX 153941671 153941829 -12708467 + Lx6 LINE L1 7312 7458 -2 7 1759 1297 206 27 33 chrX 153941890 153942263 -12708033 - RMER1B Other Other -272 794 277 7 1759 4642 142 113 1 chrX 153942267 153943078 -12707218 - RMER19B LTR ERVK 0 902 1 7 1759 2672 225 158 43 chrX 153943562 153944452 -12705844 - Charlie5 DNA MER1_type -495 2129 1123 7 1759 1043 174 42 33 chrX 153944452 153944666 -12705630 - B3 SINE B2 0 216 1 7 1759 2672 225 158 43 chrX 153944666 153944777 -12705519 - Charlie5 DNA MER1_type -1502 1122 1013 7 1759 1063 207 49 5 chrX 153945227 153945431 -12704865 + B3 SINE B2 1 213 -3 7 1759 496 252 65 32 chrX 153945464 153945587 -12704709 + PB1 SINE Alu 1 127 0 7 1759 2896 182 40 52 chrX 153945872 153946527 -12703769 + RMER19B LTR ERVK 1 890 -12 7 1759 436 219 114 109 chrX 153946551 153946761 -12703535 + L1MC4 LINE L1 6345 6555 -1487 7 1759 654 325 24 15 chrX 153947025 153947231 -12703065 - B4 SINE B4 -49 243 36 7 1759 726 310 6 0 chrX 153947250 153947421 -12702875 - ID_B1 SINE B4 -1 223 52 7 1759 735 292 0 0 chrX 153947455 153947626 -12702670 + B3A SINE B2 6 176 -22 7 1759 417 221 128 15 chrX 153947741 153947874 -12702422 + B4A SINE B4 123 270 -22 7 1759 29 0 0 0 chrX 153947911 153947940 -12702356 + AT_rich Low_complexity Low_complexity 1 29 0 8 1759 268 328 46 39 chrX 153948027 153948157 -12702139 + RSINE1 SINE B4 4 134 -31 8 1759 970 145 87 6 chrX 153948603 153948732 -12701564 + B2_Mm2 SINE B2 2 134 -61 8 1759 1230 68 0 0 chrX 153948732 153948878 -12701418 - B1_Mus1 SINE Alu -1 147 2 8 1759 970 145 87 6 chrX 153948878 153948921 -12701375 + B2_Mm2 SINE B2 135 187 -8 8 1759 1143 103 6 24 chrX 153949137 153949306 -12700990 + B2_Mm2 SINE B2 2 167 -28 8 1759 470 17 17 0 chrX 153949444 153949503 -12700793 + (TA)n Simple_repeat Simple_repeat 2 61 0 8 1759 423 0 0 0 chrX 153949530 153949577 -12700719 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1759 494 273 97 26 chrX 153949580 153949734 -12700562 + RSINE1 SINE B4 1 165 0 8 1759 3150 177 100 20 chrX 153949759 153950399 -12699897 + ORR1D1-int LTR MaLR 680 1370 0 8 1759 1483 199 21 155 chrX 153950400 153950429 -12699867 + ORR1D1 LTR MaLR 5 31 -343 8 1759 821 83 14 36 chrX 153950429 153950567 -12699729 + L1_Mus3 LINE L1 6501 6635 -3 8 1759 1483 199 21 155 chrX 153950567 153950894 -12699402 + ORR1D1 LTR MaLR 32 314 -60 8 1759 1218 48 0 14 chrX 153950894 153951042 -12699254 - B1_Mus2 SINE Alu 0 147 2 8 1759 1483 199 21 155 chrX 153951042 153951111 -12699185 + ORR1D1 LTR MaLR 315 374 0 8 1759 1418 95 26 0 chrX 153951350 153951539 -12698757 - B2_Mm2 SINE B2 0 195 2 8 1759 318 309 104 46 chrX 153951569 153951742 -12698554 + B3A SINE B2 1 183 -15 8 1759 182 62 31 0 chrX 153951863 153951895 -12698401 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 8 1759 4105 64 17 13 chrX 153951902 153952681 -12697615 - L1_Mus1 LINE L1 -481 6086 5317 8 1759 4256 32 0 0 chrX 153952681 153953142 -12697154 + L1_Mus1 LINE L1 6107 6567 0 8 1759 3631 30 2 2 chrX 153953218 153953614 -12696682 + MTA_Mm LTR MaLR 1 396 0 8 1759 7244 55 22 86 chrX 153953614 153954681 -12695615 + MTA_Mm-int LTR MaLR 1 1008 -90 8 1759 1348 27 0 0 chrX 153954681 153954828 -12695468 - B1_Mm SINE Alu 0 147 1 8 1759 7244 55 22 86 chrX 153954828 153954885 -12695411 + MTA_Mm-int LTR MaLR 1009 1053 -45 8 1759 1169 122 60 6 chrX 153955217 153955399 -12694897 + B2_Mm1t SINE B2 2 193 0 8 1759 955 138 22 0 chrX 153955413 153955551 -12694745 + B1_Mus1 SINE Alu 2 142 -6 8 1759 1227 78 84 0 chrX 153955736 153955903 -12694393 + B2_Mm2 SINE B2 1 181 -14 8 1759 4064 119 132 3 chrX 153956635 153957300 -12692996 - Lx4A LINE L1 0 7058 6308 8 1759 3898 100 31 86 chrX 153957297 153957442 -12692854 + Lx4A LINE L1 5653 5782 -1276 8 1759 1255 48 7 0 chrX 153957442 153957589 -12692707 + B1_Mus1 SINE Alu 1 148 0 8 1759 3898 100 31 86 chrX 153957589 153958130 -12692166 + Lx4A LINE L1 5783 6301 -757 8 1759 227 79 0 26 chrX 153958155 153958194 -12692102 + (TA)n Simple_repeat Simple_repeat 2 39 0 8 1759 1407 103 0 16 chrX 153958252 153958440 -12691856 + B2_Mm2 SINE B2 2 186 -9 8 1759 8189 154 42 43 chrX 153958448 153959177 -12691119 + Lx2 LINE L1 4285 4999 -884 8 1759 1519 60 43 0 chrX 153959177 153959362 -12690934 + B2_Mm1t SINE B2 1 193 0 8 1759 8189 114 35 17 chrX 153959362 153960981 -12689315 + Lx2 LINE L1 5000 6645 -352 8 1759 1482 126 0 5 chrX 153960979 153961202 -12689094 + Lx2 LINE L1 6775 6996 -1 8 1759 303 329 4 148 chrX 153961206 153961323 -12688973 - Lx8 LINE L1 -17 7456 7358 8 1759 1248 54 0 0 chrX 153961323 153961470 -12688826 - B1_Mm SINE Alu 0 147 1 8 1759 303 329 4 148 chrX 153961470 153961602 -12688694 - Lx8 LINE L1 -116 7357 7243 8 1759 243 0 0 0 chrX 153961622 153961649 -12688647 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 8 1759 1299 54 0 0 chrX 153961661 153961808 -12688488 - B1_Mus2 SINE Alu 0 147 1 8 1759 956 179 0 0 chrX 153961884 153962024 -12688272 + B1_Mur4 SINE Alu 1 140 -10 8 1759 224 200 0 0 chrX 153962026 153962071 -12688225 + C-rich Low_complexity Low_complexity 2 46 0 8 1759 186 128 0 0 chrX 153962559 153962598 -12687698 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 8 1759 396 217 272 31 chrX 153963034 153963229 -12687067 + LTR37B LTR ERV1 197 438 -30 8 1759 458 290 0 0 chrX 153963263 153963370 -12686926 - ID_B1 SINE B4 0 224 118 8 1759 368 336 47 8 chrX 153963370 153963392 -12686904 - B1F2 SINE Alu 0 149 16 8 1759 2303 74 12 20 chrX 153963392 153963736 -12686560 - Lx3_Mus LINE L1 -648 6361 6021 8 1759 2589 68 12 6 chrX 153963733 153964075 -12686221 + Lx3_Mus LINE L1 6646 6989 -20 8 1759 279 0 0 0 chrX 153964075 153964106 -12686190 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 8 1759 976 197 47 47 chrX 153964232 153964445 -12685851 + B3 SINE B2 2 214 -2 8 1759 264 175 0 100 chrX 153964796 153964866 -12685430 + RMER4A LTR ERVK 373 435 -31 8 1759 2438 142 44 67 chrX 153964950 153965229 -12685067 + RMER4A LTR ERVK 1 297 -169 8 1759 223 49 49 0 chrX 153965229 153965270 -12685026 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 8 1759 2438 142 44 67 chrX 153965270 153965467 -12684829 + RMER4A LTR ERVK 298 465 -1 8 1759 393 284 90 49 chrX 153965611 153965854 -12684442 + LTR81B LTR ERV1? 1139 1378 -15 8 1759 441 213 20 11 chrX 153966040 153966152 -12684144 + RLTR10A LTR ERVK 114 247 -164 8 1759 347 246 17 50 chrX 153966165 153966285 -12684011 + RLTR10A LTR ERVK 296 411 0 8 1759 415 218 93 43 chrX 153966306 153966445 -12683851 + RLTR10-int LTR ERVK 323 468 -1519 8 1759 203 130 0 100 chrX 153966515 153966575 -12683721 + GA-rich Low_complexity Low_complexity 3 56 0 8 1759 1330 312 25 8 chrX 153966756 153967273 -12683023 + MMERVK10C-int LTR ERVK 3095 3620 -3961 8 1759 263 278 30 30 chrX 153967360 153967460 -12682836 + IAP-d-int LTR ERVK 3455 3554 -1706 8 1759 1920 277 64 46 chrX 153967520 153969663 -12680633 + IAP-d-int LTR ERVK 992 5074 -1468 8 1759 423 0 0 0 chrX 153969663 153969710 -12680586 + (TA)n Simple_repeat Simple_repeat 1 47 0 8 1759 922 232 77 66 chrX 153969710 153969737 -12680559 + IAP-d-int LTR ERVK 6794 6817 -4 8 1759 431 223 20 11 chrX 153969765 153969877 -12680419 + RLTR10A LTR ERVK 114 247 -164 8 1759 355 237 17 50 chrX 153969890 153970010 -12680286 + RLTR10A LTR ERVK 296 411 0 8 1759 284 385 122 11 chrX 153970281 153970462 -12679834 + MLT1I LTR MaLR 201 401 -10 8 1759 421 139 40 0 chrX 153970512 153970613 -12679683 + (TCTCTG)n Simple_repeat Simple_repeat 4 108 0 8 1759 420 163 0 122 chrX 153970661 153970759 -12679537 - PB1D9 SINE Alu -6 114 29 8 1759 228 48 95 0 chrX 153970811 153970853 -12679443 - Lx2 LINE L1 0 6997 6952 8 1759 1160 88 0 7 chrX 153970854 153971002 -12679294 + B1_Mus1 SINE Alu 2 148 0 8 1759 235 65 21 21 chrX 153971011 153971058 -12679238 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 8 1759 9225 94 28 16 chrX 153971058 153972597 -12677699 - Lx2 LINE L1 -32 6965 5409 8 1759 1554 60 16 0 chrX 153972698 153972882 -12677414 - B2_Mm2 SINE B2 -8 187 1 8 1759 1401 72 72 0 chrX 153972905 153973085 -12677211 - B2_Mm2 SINE B2 -2 193 1 8 1759 25 0 0 0 chrX 153973122 153973147 -12677149 + AT_rich Low_complexity Low_complexity 1 25 0 8 1759 975 235 66 39 chrX 153973247 153973504 -12676792 - ORR1D2 LTR MaLR 0 370 107 8 1759 3250 99 96 4 chrX 153973545 153974003 -12676293 - Lx2 LINE L1 -1 6996 6497 8 1759 822 109 0 8 chrX 153974003 153974123 -12676173 + Lx2 LINE L1 6374 6492 -505 8 1759 716 237 90 10 chrX 153974171 153974371 -12675925 - Lx8 LINE L1 -849 6624 6409 8 1759 641 288 77 41 chrX 153974371 153974592 -12675704 - B4A SINE B4 -62 230 2 8 1759 1167 75 0 27 chrX 153974695 153974845 -12675451 - B1_Mus2 SINE Alu 0 147 2 8 1759 436 279 115 38 chrX 153975097 153975280 -12675016 - B3A SINE B2 -1 197 1 8 1759 1170 108 0 0 chrX 153975410 153975558 -12674738 + B1_Mus1 SINE Alu 1 148 0 8 1759 752 168 0 7 chrX 153975620 153975770 -12674526 + CT-rich Low_complexity Low_complexity 4 152 0 8 1759 814 178 20 0 chrX 153975770 153975916 -12674380 - B1_Mur3 SINE Alu 0 149 1 8 1759 894 244 57 98 chrX 153976074 153976338 -12673958 - B4A SINE B4 -1 291 39 8 1759 247 154 0 0 chrX 153976799 153976838 -12673458 - B4A SINE B4 -250 42 4 8 1759 24 0 0 0 chrX 153977035 153977059 -12673237 + AT_rich Low_complexity Low_complexity 1 24 0 8 1759 207 100 0 0 chrX 153977074 153977104 -12673192 + (T)n Simple_repeat Simple_repeat 1 30 0 8 1759 1237 62 0 14 chrX 153977104 153977252 -12673044 - B1_Mus2 SINE Alu 0 147 2 8 1759 578 262 85 0 chrX 153977303 153977444 -12672852 + B3A SINE B2 9 161 -37 8 1759 308 243 29 0 chrX 153977402 153977472 -12672824 - RSINE1 SINE B4 -90 75 4 8 1759 211 277 108 0 chrX 153977506 153977571 -12672725 + B4A SINE B4 4 75 -217 8 1759 1568 161 46 20 chrX 153977605 153977910 -12672386 - ORR1D1 LTR MaLR -8 366 54 8 1759 4479 99 12 0 chrX 153977910 153978487 -12671809 + MT2B2 LTR ERVL 1 584 0 8 1759 234 286 0 0 chrX 153979755 153979804 -12670492 - B2_Mm1t SINE B2 -142 51 3 8 1759 397 140 27 0 chrX 153979904 153980014 -12670282 - B2_Mm2 SINE B2 0 195 47 8 1759 1056 114 17 29 chrX 153980046 153980218 -12670078 - B2_Mm1t SINE B2 -22 171 2 8 1759 942 77 137 8 chrX 153980233 153980364 -12669932 - B1_Mus1 SINE Alu 0 148 1 8 1759 834 206 21 0 chrX 153980537 153980678 -12669618 - B1_Mur1 SINE Alu -5 144 1 8 1759 844 253 0 5 chrX 153980721 153980908 -12669388 - B3 SINE B2 -11 205 20 8 1759 182 37 37 0 chrX 153981400 153981427 -12668869 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 8 1759 581 304 98 64 chrX 153981495 153981759 -12668537 - B4 SINE B4 -18 274 2 8 1759 419 211 25 12 chrX 153982030 153982141 -12668155 + B1F SINE Alu 10 118 -31 8 1759 1321 102 11 0 chrX 153982203 153982380 -12667916 + B2_Mm1t SINE B2 1 179 -14 8 1759 343 118 325 27 chrX 153982447 153982556 -12667740 + B2_Mm2 SINE B2 47 191 -4 8 1759 313 22 43 0 chrX 153982670 153982716 -12667580 + (TC)n Simple_repeat Simple_repeat 1 48 0 8 1759 968 83 105 0 chrX 153983139 153983272 -12667024 + B1_Mus2 SINE Alu 1 147 0 8 1759 885 115 8 0 chrX 153983290 153983412 -12666884 - B2_Mm1t SINE B2 -69 124 2 8 1759 266 252 203 22 chrX 153983640 153983778 -12666518 - Lx8 LINE L1 -23 7450 7288 8 1759 815 265 28 14 chrX 153983832 153984050 -12666246 - Lx8 LINE L1 -182 7291 7071 8 1759 1239 302 69 23 chrX 153984057 153984582 -12665714 - Lx8 LINE L1 -889 6584 6036 8 1759 795 174 46 66 chrX 153984974 153985233 -12665063 - RMER17C LTR ERVK -156 254 1 8 1759 429 270 0 10 chrX 153985304 153985405 -12664891 + B4A SINE B4 186 285 -7 8 1759 26 0 0 0 chrX 153985442 153985468 -12664828 + AT_rich Low_complexity Low_complexity 1 26 0 8 1759 256 216 44 33 chrX 153986577 153986668 -12663628 + Charlie22a DNA MER1_type 46 137 -354 8 1759 263 262 15 15 chrX 153986686 153986752 -12663544 + ID4_ SINE ID 2 67 -16 8 1759 321 266 109 38 chrX 153986993 153987177 -12663119 + Tigger15a DNA TcMar 488 684 -31 8 1759 405 158 0 0 chrX 153988092 153988174 -12662122 + (TG)n Simple_repeat Simple_repeat 1 82 0 8 1759 520 222 28 119 chrX 153988181 153988324 -12661972 - B1F1 SINE Alu -14 135 6 9 1759 270 0 0 0 chrX 153988447 153988477 -12661819 + (TC)n Simple_repeat Simple_repeat 1 30 0 9 1759 333 0 0 0 chrX 153988477 153988513 -12661783 + (CA)n Simple_repeat Simple_repeat 1 37 0 9 1759 252 0 0 0 chrX 153989295 153989323 -12660973 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 9 1759 772 111 175 0 chrX 153989332 153989458 -12660838 + B1_Mus1 SINE Alu 1 148 0 9 1759 235 220 11 32 chrX 153989500 153989594 -12660702 + A-rich Low_complexity Low_complexity 1 92 0 9 1759 222 311 16 0 chrX 153989760 153989821 -12660475 - ID4 SINE ID -21 62 1 9 1759 21 0 0 0 chrX 153989934 153989955 -12660341 + AT_rich Low_complexity Low_complexity 1 21 0 9 1759 1238 65 0 0 chrX 153990090 153990245 -12660051 - B2_Mm2 SINE B2 -38 157 3 9 1759 813 178 105 39 chrX 153990328 153990509 -12659787 + B3 SINE B2 1 193 -23 9 1759 234 0 0 0 chrX 153991051 153991077 -12659219 + (TC)n Simple_repeat Simple_repeat 2 27 0 9 1759 257 219 14 0 chrX 153991084 153991157 -12659139 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 9 1759 611 174 61 0 chrX 153991167 153991265 -12659031 + B1_Mur1 SINE Alu 18 121 -28 9 1759 1113 97 7 0 chrX 153991298 153991443 -12658853 - B1_Mus2 SINE Alu 0 147 2 9 1759 180 0 0 0 chrX 153991454 153991474 -12658822 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 9 1759 1110 157 18 41 chrX 153991868 153991899 -12658397 + L1Md_F2 LINE L1 6353 6381 -185 9 1759 820 196 21 0 chrX 153991899 153992042 -12658254 + B1_Mur1 SINE Alu 3 148 -1 9 1759 1520 48 5 11 chrX 153992042 153992240 -12658056 + L1Md_F2 LINE L1 6382 6581 -1 9 1759 717 221 21 28 chrX 153992313 153992457 -12657839 + B1_Mur1 SINE Alu 7 149 0 9 1759 341 225 171 0 chrX 153992551 153992662 -12657634 + L1MB8 LINE L1 5849 5978 -200 9 1759 1040 94 64 7 chrX 153993050 153993190 -12657106 + B1_Mus1 SINE Alu 1 148 0 9 1759 534 246 9 0 chrX 153993976 153994086 -12656210 + ID_B1 SINE B4 111 221 -3 9 1759 438 132 0 0 chrX 153994088 153994126 -12656170 + (A)n Simple_repeat Simple_repeat 1 38 0 9 1759 1284 48 0 0 chrX 153994126 153994273 -12656023 + B1_Mus2 SINE Alu 1 147 0 9 1759 438 132 0 0 chrX 153994273 153994317 -12655979 + (A)n Simple_repeat Simple_repeat 1 44 0 9 1759 461 130 0 57 chrX 153994321 153994427 -12655869 + Lx4A LINE L1 6956 7055 -3 9 1759 225 132 0 0 chrX 153994668 153994706 -12655590 + (TAA)n Simple_repeat Simple_repeat 1 38 0 9 1759 353 206 10 0 chrX 153994810 153994907 -12655389 + GA-rich Low_complexity Low_complexity 1 98 0 9 1759 597 237 0 82 chrX 153995167 153995314 -12654982 + RSINE1 SINE B4 2 136 -29 9 1759 381 43 0 0 chrX 153995330 153995377 -12654919 + (CA)n Simple_repeat Simple_repeat 2 48 0 9 1759 890 202 162 11 chrX 153995745 153996010 -12654286 + Lx9 LINE L1 7340 7644 0 9 1759 225 0 0 0 chrX 153996099 153996124 -12654172 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 9 1759 307 271 0 14 chrX 153996151 153996222 -12654074 - ID4_ SINE ID -2 81 12 9 1759 278 311 0 13 chrX 153996288 153996363 -12653933 - ID4 SINE ID -7 76 3 9 1759 1463 79 11 0 chrX 153996436 153996626 -12653670 + B2_Mm2 SINE B2 2 193 -2 9 1759 566 241 20 52 chrX 153997510 153997663 -12652633 + B3 SINE B2 48 195 -21 9 1759 981 31 131 8 chrX 153997734 153997864 -12652432 - B1_Mm SINE Alu 0 147 2 9 1759 237 83 28 0 chrX 153997884 153997920 -12652376 - RLTR27 LTR ERVK -60 249 213 9 1759 543 218 88 78 chrX 153997967 153998171 -12652125 + Lx8 LINE L1 7264 7469 -4 9 1759 31 68 0 0 chrX 153998171 153998230 -12652066 + AT_rich Low_complexity Low_complexity 1 59 0 9 1759 594 244 0 0 chrX 153998300 153998415 -12651881 + PB1D9 SINE Alu 1 115 -5 9 1759 1149 90 0 7 chrX 153998443 153998589 -12651707 + B1_Mus1 SINE Alu 2 146 -2 9 1759 234 105 0 0 chrX 153998630 153998668 -12651628 + (A)n Simple_repeat Simple_repeat 1 38 0 9 1759 985 260 12 53 chrX 153998731 153998975 -12651321 + B4A SINE B4 1 234 -58 9 1759 605 376 20 15 chrX 153999803 154000000 -12650296 + B4A SINE B4 2 199 -93 9 1759 240 86 0 0 chrX 154000100 154000135 -12650161 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1759 616 255 335 66 chrX 154000267 154000494 -12649802 - B4A SINE B4 -4 288 1 2 1759 400 246 133 37 chrX 154000636 154000771 -12649525 + RSINE1 SINE B4 12 159 -6 3 1759 308 360 86 17 chrX 154000873 154000989 -12649307 - RSINE1 SINE B4 -6 159 36 4 1759 749 95 9 0 chrX 154001093 154001198 -12649098 + B2_Mm2 SINE B2 2 107 -88 5 1759 253 273 0 48 chrX 154001235 154001339 -12648957 + (CGGGG)n Simple_repeat Simple_repeat 5 103 0 6 1759 266 232 18 0 chrX 154001498 154001554 -12648742 + 4.5SRNA scRNA scRNA 32 88 -6 7 1759 527 94 22 66 chrX 154001505 154001596 -12648700 + B1_Mus2 SINE Alu 41 127 -20 8 1759 236 279 71 79 chrX 154001510 154001650 -12648646 + RLTR25A LTR ERVK 522 660 -443 9 1759 489 294 88 7 chrX 154001622 154001769 -12648527 - B3A SINE B2 -38 160 2 1 1759 612 168 26 17 chrX 154002217 154002332 -12647964 - PB1D9 SINE Alu 0 120 5 1 1759 393 308 59 15 chrX 154003302 154003437 -12646859 + RSINE1 SINE B4 23 163 -2 1 1759 326 260 36 30 chrX 154003491 154003598 -12646698 + B1_Mur2 SINE Alu 10 149 0 1 1759 254 305 9 28 chrX 154005661 154005828 -12644468 - MMSAT4 Satellite Satellite -23 163 1 1 1759 24 0 0 0 chrX 154007348 154007372 -12642924 + AT_rich Low_complexity Low_complexity 1 24 0 1 1759 297 196 38 55 chrX 154007546 154007768 -12642528 + (TA)n Simple_repeat Simple_repeat 1 218 0 1 1759 218 290 0 55 chrX 154007832 154007905 -12642391 + PB1D10 SINE Alu 47 115 -2 1 1759 630 101 202 0 chrX 154008157 154008256 -12642040 - PB1D9 SINE Alu 0 120 2 1 1759 1147 60 164 29 chrX 154008691 154008862 -12641434 - B2_Mm2 SINE B2 0 195 2 1 1759 1215 75 0 7 chrX 154009139 154009287 -12641009 - B1_Mm SINE Alu 0 147 1 2 1759 342 270 92 112 chrX 154009289 154009332 -12640964 - B2_Mm2 SINE B2 -3 192 142 2 1759 408 88 0 0 chrX 154009332 154009389 -12640907 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 1759 549 242 68 57 chrX 154009389 154009541 -12640755 - B3 SINE B2 -54 141 1 2 1760 1047 71 7 0 chrX 154009609 154009750 -12640546 + B1_Mus1 SINE Alu 6 147 -1 2 1760 443 228 43 0 chrX 154009925 154010017 -12640279 - B3A SINE B2 -102 96 1 2 1760 606 335 0 19 chrX 154010048 154010209 -12640087 - RSINE1 SINE B4 -4 161 4 2 1760 23 33 0 0 chrX 154010622 154010652 -12639644 + AT_rich Low_complexity Low_complexity 1 30 0 2 1760 1466 75 11 16 chrX 154011413 154011604 -12638692 + B2_Mm1t SINE B2 2 191 -2 2 1760 298 234 0 0 chrX 154011752 154011816 -12638480 + Lx8 LINE L1 6481 6544 -929 2 1760 539 132 25 11 chrX 154011846 154011949 -12638347 - PB1D9 SINE Alu 0 120 14 2 1760 1289 162 132 38 chrX 154012082 154012370 -12637926 + ORR1C2 LTR MaLR 1 315 -69 3 1760 2610 218 107 32 chrX 154012392 154013017 -12637279 + Lx8 LINE L1 6800 7471 -2 2 1760 250 294 14 56 chrX 154013397 154013469 -12636827 + B4A SINE B4 84 152 -140 3 1760 281 284 113 14 chrX 154013410 154013493 -12636803 + PB1D10 SINE Alu 9 104 -16 3 1760 603 223 49 37 chrX 154013541 154013704 -12636592 + RSINE1 SINE B4 1 165 0 3 1760 614 208 135 8 chrX 154014550 154014676 -12635620 + B1_Mm SINE Alu 1 142 -5 3 1760 1765 121 63 37 chrX 154015102 154015136 -12635160 - ORR1A2 LTR MaLR -19 308 275 3 1760 1303 96 73 0 chrX 154015136 154015313 -12634983 - B2_Mm2 SINE B2 -5 190 1 3 1760 1765 121 63 37 chrX 154015313 154015578 -12634718 - ORR1A2 LTR MaLR -53 274 1 3 1760 8817 142 72 42 chrX 154015578 154017319 -12632977 - ORR1A2-int LTR MaLR 0 1792 1 3 1760 380 74 19 0 chrX 154017319 154017373 -12632923 - ORR1A2 LTR MaLR 0 326 272 3 1760 1043 58 35 35 chrX 154017412 154017554 -12632742 - B1_Mus2 SINE Alu -4 143 2 3 1760 1860 113 14 0 chrX 154017554 154017836 -12632460 - ORR1A2 LTR MaLR -41 286 1 3 1760 862 239 74 5 chrX 154017932 154018134 -12632162 + B3 SINE B2 1 216 0 3 1760 339 269 140 53 chrX 154018438 154018552 -12631744 + B3 SINE B2 1 124 -92 3 1760 816 266 9 81 chrX 154018599 154018761 -12631535 - B3 SINE B2 -9 207 55 4 1760 3080 101 87 13 chrX 154018761 154019223 -12631073 - Lx2A1 LINE L1 0 7008 6513 4 1760 816 266 9 81 chrX 154019223 154019281 -12631015 - B3 SINE B2 -162 54 3 4 1760 671 288 30 18 chrX 154019281 154019432 -12630864 - B4A SINE B4 -58 234 82 4 1760 618 242 38 25 chrX 154019677 154019834 -12630462 - RSINE1 SINE B4 -5 160 2 4 1760 751 259 63 27 chrX 154019834 154020056 -12630240 - B4A SINE B4 -60 232 3 4 1760 428 281 88 7 chrX 154020093 154020229 -12630067 + B1_Mur1 SINE Alu 2 148 -1 4 1760 1439 87 22 0 chrX 154020248 154020432 -12629864 + B2_Mm2 SINE B2 2 189 -6 4 1760 270 330 105 28 chrX 154020501 154020682 -12629614 + MIR SINE MIR 61 255 -7 4 1760 186 43 0 0 chrX 154020721 154020744 -12629552 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 4 1760 1449 62 11 0 chrX 154020747 154020924 -12629372 - B2_Mm1a SINE B2 -14 179 1 4 1760 2024 165 95 11 chrX 154020927 154021306 -12628990 - MTC LTR MaLR -9 412 2 5 1760 6037 155 85 28 chrX 154021307 154021626 -12628670 - MTC-int LTR MaLR 0 1258 925 5 1760 1237 82 0 0 chrX 154021626 154021773 -12628523 + B1_Mus2 SINE Alu 1 147 0 5 1760 6037 155 85 28 chrX 154021773 154022637 -12627659 - MTC-int LTR MaLR -334 924 7 5 1760 2224 153 111 23 chrX 154022639 154023026 -12627270 - MTC LTR MaLR 0 421 1 5 1760 484 258 161 0 chrX 154023155 154023279 -12627017 - B1F2 SINE Alu -5 144 1 5 1760 365 229 105 0 chrX 154023551 154023656 -12626640 + L1MC1 LINE L1 6218 6333 0 5 1760 610 156 0 60 chrX 154024142 154024292 -12626004 + Lx4B LINE L1 6917 7057 -1 5 1760 469 157 12 0 chrX 154025119 154025202 -12625094 - RMER17B LTR ERVK -696 262 179 5 1760 195 344 0 62 chrX 154025365 154025461 -12624835 + L2b LINE L2 2658 2747 -672 5 1760 2336 133 36 43 chrX 154025619 154025846 -12624450 + RMER13B LTR ERVK 5 229 -679 5 1760 1930 94 97 42 chrX 154025846 154025943 -12624353 - L1_Mus4 LINE L1 -4 6632 6549 5 1760 198 0 0 0 chrX 154025943 154025965 -12624331 + (C)n Simple_repeat Simple_repeat 1 22 0 5 1760 1930 94 97 42 chrX 154025965 154026177 -12624119 - L1_Mus4 LINE L1 -88 6548 6308 5 1760 2336 133 36 43 chrX 154026177 154026365 -12623931 + RMER13B LTR ERVK 230 417 -491 5 1760 1022 234 123 14 chrX 154026385 154026662 -12623634 + RMER13B LTR ERVK 519 825 -35 5 1760 318 264 0 28 chrX 154026778 154026881 -12623415 - ID4 SINE ID -53 99 4 6 1760 448 228 134 31 chrX 154026900 154027027 -12623269 - B1F1 SINE Alu -9 140 1 6 1760 224 385 21 0 chrX 154027093 154027189 -12623107 + MIRm SINE MIR 78 175 -101 6 1760 193 402 66 0 chrX 154027499 154027621 -12622675 + L2b LINE L2 3244 3373 -2 5 1760 1345 64 64 0 chrX 154027873 154028046 -12622250 + B2_Mm2 SINE B2 2 185 -10 6 1760 281 230 54 0 chrX 154028133 154028207 -12622089 + ID4 SINE ID 4 81 -2 6 1760 945 249 33 19 chrX 154028316 154028529 -12621767 + B3 SINE B2 1 216 0 6 1760 628 279 0 0 chrX 154028538 154028678 -12621618 + B1F2 SINE Alu 5 144 -5 6 1760 1357 20 0 0 chrX 154028999 154029146 -12621150 - B1_Mus2 SINE Alu 0 147 1 6 1760 357 125 0 0 chrX 154029316 154029372 -12620924 + (GGA)n Simple_repeat Simple_repeat 2 57 0 6 1760 1490 38 15 61 chrX 154029931 154030127 -12620169 - B2_Mm2 SINE B2 -8 187 1 6 1760 550 215 32 32 chrX 154030714 154030839 -12619457 - B1F1 SINE Alu -10 139 15 7 1760 868 180 143 0 chrX 154030934 154031123 -12619173 + B3 SINE B2 1 216 0 7 1760 326 23 0 23 chrX 154031208 154031252 -12619044 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 7 1760 381 213 5 0 chrX 154031255 154031323 -12618973 - B3 SINE B2 -122 71 1 7 1760 399 265 176 17 chrX 154031334 154031453 -12618843 - ID_B1 SINE B4 -3 221 84 7 1760 297 183 0 0 chrX 154031498 154031558 -12618738 + (TA)n Simple_repeat Simple_repeat 2 61 0 7 1760 1137 213 24 0 chrX 154031947 154032158 -12618138 - ID_B1 SINE B4 -8 216 1 7 1760 1350 252 20 35 chrX 154032372 154032713 -12617583 - MTE2b LTR MaLR -31 348 13 7 1760 330 331 22 7 chrX 154032715 154032852 -12617444 + B1F1 SINE Alu 1 139 -10 7 1760 3560 103 81 22 chrX 154032937 154033482 -12616814 + Lx3B LINE L1 6393 6969 -4 7 1760 465 182 0 134 chrX 154033545 154033672 -12616624 + MT2B LTR ERVL 155 264 -337 8 1760 1050 58 0 21 chrX 154033565 154033706 -12616590 + B1_Mus2 SINE Alu 9 146 -1 8 1760 477 269 159 19 chrX 154033804 154034062 -12616234 - MER33 DNA MER1_type -26 298 5 8 1760 777 238 46 15 chrX 154034651 154034847 -12615449 + B3 SINE B2 1 202 -14 8 1760 506 276 14 7 chrX 154035132 154035278 -12615018 - MER5A1 DNA MER1_type -1 165 19 8 1760 278 162 128 51 chrX 154035349 154035427 -12614869 - MIR SINE MIR -116 146 63 8 1760 414 296 25 56 chrX 154035823 154035984 -12614312 + MER5A1 DNA MER1_type 2 157 -9 8 1760 369 58 0 0 chrX 154036678 154036730 -12613566 + (T)n Simple_repeat Simple_repeat 1 52 0 8 1760 1469 109 5 0 chrX 154037081 154037273 -12613023 - B2_Mm1a SINE B2 0 193 1 8 1760 29 0 0 0 chrX 154037348 154037377 -12612919 + AT_rich Low_complexity Low_complexity 1 29 0 8 1760 441 243 43 15 chrX 154037469 154037590 -12612706 - B1_Mur2 SINE Alu -5 144 1 9 1760 1249 61 0 0 chrX 154037635 154037782 -12612514 + B1_Mm SINE Alu 1 147 0 9 1760 420 283 53 9 chrX 154037840 154037954 -12612342 + RSINE1 SINE B4 6 124 -41 9 1760 369 231 80 32 chrX 154038027 154038152 -12612144 + MER5B DNA MER1_type 3 133 -45 9 1760 407 233 125 62 chrX 154038242 154038370 -12611926 - ID_B1 SINE B4 0 224 89 9 1760 34 24 0 0 chrX 154039049 154039090 -12611206 + AT_rich Low_complexity Low_complexity 1 41 0 9 1760 38 98 0 0 chrX 154039957 154040079 -12610217 + AT_rich Low_complexity Low_complexity 1 122 0 9 1760 21 0 0 0 chrX 154040513 154040534 -12609762 + AT_rich Low_complexity Low_complexity 1 21 0 9 1760 22 0 0 0 chrX 154040657 154040679 -12609617 + AT_rich Low_complexity Low_complexity 1 22 0 9 1760 306 167 152 0 chrX 154041275 154041341 -12608955 - PB1D10 SINE Alu -2 115 40 9 1760 1233 82 0 0 chrX 154041513 154041659 -12608637 - B1_Mus2 SINE Alu 0 147 2 1 1760 1123 106 127 17 chrX 154042100 154042273 -12608023 - B2_Mm2 SINE B2 -2 193 2 1 1760 249 62 0 0 chrX 154042436 154042468 -12607828 - L1_Mm LINE L1 -786 5097 5066 1 1760 541 237 101 145 chrX 154042613 154042768 -12607528 - B3A SINE B2 0 198 40 1 1760 1320 20 7 0 chrX 154042768 154042914 -12607382 + B1_Mus2 SINE Alu 1 147 0 1 1760 541 237 101 145 chrX 154042914 154042965 -12607331 - B3A SINE B2 -159 39 1 1 1760 473 61 15 0 chrX 154043721 154043787 -12606509 + B1_Mus1 SINE Alu 2 68 -80 1 1760 1818 181 64 66 chrX 154043791 154044326 -12605970 + RMER6A LTR ERVK 282 748 -8 1 1760 1238 178 240 13 chrX 154044534 154044847 -12605449 - ORR1C2 LTR MaLR 0 384 1 1 1760 276 261 0 0 chrX 154045066 154045131 -12605165 - RSINE1 SINE B4 -4 161 97 1 1760 374 256 33 0 chrX 154045129 154045219 -12605077 + RSINE1 SINE B4 45 137 -28 1 1760 489 84 0 0 chrX 154045228 154045299 -12604997 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 1760 311 274 14 0 chrX 154045425 154045498 -12604798 + RSINE1 SINE B4 8 81 -84 1 1760 971 211 155 56 chrX 154045573 154045700 -12604596 - RLTR14 LTR ERV1 -6 376 214 1 1760 1655 33 33 0 chrX 154045700 154045883 -12604413 + B2_Mm1t SINE B2 1 189 -4 1 1760 971 211 155 56 chrX 154045883 154046097 -12604199 - RLTR14 LTR ERV1 -169 213 2 1 1760 382 152 114 0 chrX 154046418 154046497 -12603799 + Lx4B LINE L1 6901 6988 -70 1 1760 307 228 53 0 chrX 154046509 154046566 -12603730 - ID4_ SINE ID -9 74 15 1 1760 374 295 0 0 chrX 154046583 154046688 -12603608 - L1MEd LINE L1 -6013 106 2 1 1760 1115 89 0 33 chrX 154046797 154046810 -12603486 - B1_Mus2 SINE Alu 0 147 139 1 1760 243 0 0 0 chrX 154046810 154046837 -12603459 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1760 1115 89 0 33 chrX 154046837 154046974 -12603322 - B1_Mus2 SINE Alu -9 138 2 1 1760 2606 105 3 3 chrX 154047159 154047503 -12602793 + ORR1A1 LTR MaLR 1 344 -2 1 1760 484 286 21 14 chrX 154048147 154048338 -12601958 + B3 SINE B2 1 192 -3 1 1760 378 276 17 25 chrX 154048353 154048472 -12601824 + MLT1A0 LTR MaLR 248 365 0 1 1760 294 236 38 100 chrX 154048472 154048544 -12601752 - PB1D10 SINE Alu -18 99 33 1 1760 3625 57 2 0 chrX 154048623 154049048 -12601248 - L1_Mus1 LINE L1 -1 6566 6141 1 1760 1156 29 0 0 chrX 154049049 154049185 -12601111 + L1_Mus1 LINE L1 5989 6124 -443 1 1760 1558 208 91 5 chrX 154049283 154049688 -12600608 + RMER10A LTR ERVL 1 440 -2 1 1760 2039 152 32 134 chrX 154049837 154050308 -12599988 + RLTR23 LTR ERV1 8 430 0 1 1760 256 24 49 0 chrX 154050379 154050420 -12599876 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1 1760 34 0 0 0 chrX 154051183 154051217 -12599079 + GC_rich Low_complexity Low_complexity 1 34 0 1 1760 463 294 48 27 chrX 154051429 154051576 -12598720 + L1MEd LINE L1 500 649 -5470 1 1760 852 223 71 23 chrX 154052025 154052291 -12598005 - Lx9 LINE L1 -1 7643 7365 1 1760 297 156 0 0 chrX 154052297 154052342 -12597954 - ORR1B2 LTR MaLR -10 384 340 1 1760 16190 128 111 4 chrX 154052360 154057131 -12593165 - L1_Mus1 LINE L1 -1 6566 584 1 1760 2882 36 0 3 chrX 154057132 154057470 -12592826 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 1760 29536 14 1 2 chrX 154057470 154060711 -12589585 - IAPEz-int LTR ERVK 0 6481 3244 1 1760 22934 27 33 9 chrX 154060703 154063382 -12586914 - IAPEz-int LTR ERVK -3730 2751 8 1 1760 2882 36 0 3 chrX 154063382 154063720 -12586576 - IAPLTR1a_Mm LTR ERVK 0 337 1 1 1760 618 228 59 8 chrX 154063720 154063884 -12586412 - L1Md_F LINE L1 -6046 473 328 1 1760 1612 190 25 6 chrX 154063916 154064234 -12586062 - ORR1B2 LTR MaLR -43 324 1 1 1760 360 82 65 16 chrX 154064234 154064296 -12586000 - Lx9 LINE L1 -275 7369 7305 1 1760 1230 61 0 0 chrX 154064307 154064454 -12585842 - B1_Mus1 SINE Alu 0 148 2 1 1760 542 280 14 14 chrX 154064640 154064785 -12585511 + B4 SINE B4 3 147 -145 1 1760 4307 114 14 45 chrX 154064797 154065587 -12584709 + RMER17A LTR ERVK 1 751 0 1 1760 1229 54 0 0 chrX 154065984 154066131 -12584165 - B1_Mus2 SINE Alu 0 147 1 1 1760 3185 34 31 8 chrX 154066805 154067192 -12583104 + MTA_Mm LTR MaLR 1 396 0 1 1760 769 268 50 110 chrX 154068130 154068574 -12581722 - RLTR23 LTR ERV1 -6 424 8 1 1760 466 230 13 94 chrX 154069056 154069205 -12581091 - B3A SINE B2 -16 182 46 1 1760 2734 124 52 22 chrX 154069225 154069671 -12580625 - RMER6B LTR ERVK -2 459 1 1 1760 668 275 28 51 chrX 154069837 154070052 -12580244 + MTEa LTR MaLR 58 267 -112 1 1760 1688 77 74 0 chrX 154070160 154070578 -12579718 + RLTR1D LTR ERV1 157 605 0 1 1760 267 197 199 27 chrX 154070634 154070780 -12579516 - MER44A DNA MER2_type -145 194 24 1 1760 323 258 189 24 chrX 154070901 154071028 -12579268 - B1F2 SINE Alu 0 149 2 1 1760 218 309 79 7 chrX 154071330 154071470 -12578826 + L2a LINE L2 3272 3421 -5 1 1760 920 320 95 68 chrX 154073217 154073743 -12576553 - MLT2B3 LTR ERVL -6 548 9 1 1760 1861 149 44 39 chrX 154074341 154074475 -12575821 + RLTR19 LTR ERVK 1 138 -361 1 1760 2947 108 92 37 chrX 154074475 154074967 -12575329 - MURVY-LTR LTR ERV1 0 519 1 1 1760 1861 149 44 39 chrX 154074967 154075196 -12575100 + RLTR19 LTR ERVK 139 366 -133 1 1760 281 252 178 48 chrX 154075945 154076014 -12574282 - RSINE1 SINE B4 0 165 102 1 1760 342 0 0 0 chrX 154076014 154076052 -12574244 + (TTGG)n Simple_repeat Simple_repeat 3 40 0 1 1760 281 252 178 48 chrX 154076052 154076128 -12574168 - RSINE1 SINE B4 -64 101 1 1 1760 435 236 0 0 chrX 154076138 154076227 -12574069 - 5S rRNA rRNA -31 90 2 1 1760 280 261 0 0 chrX 154076457 154076522 -12573774 - ID4 SINE ID -13 70 6 1 1760 400 240 71 47 chrX 154076657 154076760 -12573536 + LTR50 LTR ERVL 82 188 -607 1 1760 1984 131 46 66 chrX 154076760 154077152 -12573144 - ORR1C2 LTR MaLR 0 384 1 1 1760 400 240 71 47 chrX 154077152 154077175 -12573121 + LTR50 LTR ERVL 189 211 -584 1 1760 336 251 36 3 chrX 154077391 154077490 -12572806 - L1MA4 LINE L1 -230 5941 5840 1 1760 986 247 42 121 chrX 154078250 154078655 -12571641 - MTE2a LTR MaLR 0 379 7 1 1760 8366 30 10 1 chrX 154078740 154079761 -12570535 - L1Md_F3 LINE L1 -12 6572 5547 1 1760 1222 113 0 31 chrX 154080571 154080762 -12569534 + B2_Mm2 SINE B2 2 186 -9 1 1760 342 0 0 0 chrX 154080798 154080836 -12569460 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1760 2180 119 42 64 chrX 154081159 154081564 -12568732 - RMER10B LTR ERVL 0 398 3 1 1760 207 0 0 0 chrX 154081642 154081665 -12568631 + (TTTTTG)n Simple_repeat Simple_repeat 5 27 0 1 1760 428 323 20 54 chrX 154081878 154082081 -12568215 + MER105 DNA DNA 1 196 -8 1 1760 217 362 11 0 chrX 154082187 154082281 -12568015 - MIR3 SINE MIR -21 187 93 1 1760 728 252 59 22 chrX 154082303 154082501 -12567795 + B3A SINE B2 1 189 -4 1 1760 901 244 66 66 chrX 154082528 154082817 -12567479 + B4A SINE B4 4 292 0 1 1760 372 287 85 8 chrX 154083563 154083693 -12566603 + LTR90A LTR LTR 759 898 -78 1 1760 246 354 12 0 chrX 154083719 154083733 -12566563 - ID4 SINE ID 0 83 40 1 1760 252 259 17 0 chrX 154083733 154083791 -12566505 - tRNA-Ala-GCY_ tRNA tRNA -12 63 5 1 1760 1559 53 21 0 chrX 154083864 154084052 -12566244 + B2_Mm1t SINE B2 2 193 0 1 1760 216 0 0 0 chrX 154085173 154085197 -12565099 + (GGAGAA)n Simple_repeat Simple_repeat 1 24 0 1 1760 869 30 72 6 chrX 154085197 154085363 -12564933 + (GGA)n Simple_repeat Simple_repeat 3 180 0 1 1760 202 111 44 0 chrX 154085363 154085381 -12564915 + polypurine Low_complexity Low_complexity 2 21 0 1 1760 967 35 40 28 chrX 154085381 154085558 -12564738 + (GGA)n Simple_repeat Simple_repeat 2 180 0 1 1760 202 111 44 0 chrX 154085558 154085584 -12564712 + polypurine Low_complexity Low_complexity 22 47 0 1 1760 328 336 17 8 chrX 154085782 154085899 -12564397 + MIR SINE MIR 8 125 -137 1 1760 394 310 126 54 chrX 154086195 154086434 -12563862 - ORR1E LTR MaLR 0 359 104 1 1760 446 241 71 0 chrX 154086962 154087074 -12563222 - ORR1E LTR MaLR -232 127 8 1 1760 275 232 34 68 chrX 154087583 154087671 -12562625 + B4 SINE B4 208 292 0 1 1760 245 177 0 12 chrX 154087678 154087758 -12562538 + (CAGA)n Simple_repeat Simple_repeat 2 80 0 1 1760 361 314 14 35 chrX 154087773 154087915 -12562381 + B1F SINE Alu 11 149 0 1 1760 510 17 0 0 chrX 154088052 154088111 -12562185 + (TTTC)n Simple_repeat Simple_repeat 3 61 0 1 1760 1170 63 0 0 chrX 154088326 154088468 -12561828 + B1_Mus1 SINE Alu 1 142 -6 1 1760 702 91 0 0 chrX 154088470 154088569 -12561727 + (GAAA)n Simple_repeat Simple_repeat 2 100 0 1 1760 1635 174 45 53 chrX 154089846 154090226 -12560070 + ORR1C1 LTR MaLR 1 421 0 1 1760 1622 47 0 5 chrX 154090511 154090704 -12559592 - B2_Mm1t SINE B2 -1 192 1 1 1760 2868 127 57 12 chrX 154090836 154091330 -12558966 + RMER20A LTR ERVK 1 516 0 1 1760 623 148 17 0 chrX 154091790 154091905 -12558391 + CT-rich Low_complexity Low_complexity 2 118 0 1 1760 1014 108 7 0 chrX 154091908 154092047 -12558249 - B1_Mur4 SINE Alu -9 141 2 1 1760 338 260 169 2 chrX 154092055 154092221 -12558075 - L1M3 LINE L1 -360 5824 5621 1 1760 25 51 0 0 chrX 154093381 154093420 -12556876 + AT_rich Low_complexity Low_complexity 1 39 0 1 1760 279 0 0 0 chrX 154093438 154093469 -12556827 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1760 382 277 50 16 chrX 154093519 154093640 -12556656 - B3A SINE B2 -70 125 1 1 1760 342 244 0 24 chrX 154093974 154094058 -12556238 + ID4_ SINE ID 2 83 0 1 1760 233 274 0 16 chrX 154094184 154094247 -12556049 + (TCTG)n Simple_repeat Simple_repeat 1 62 0 1 1760 336 216 14 0 chrX 154094306 154094380 -12555916 - B3A SINE B2 -123 75 1 1 1760 1311 83 28 0 chrX 154094800 154094981 -12555315 - B2_Mm2 SINE B2 -9 186 1 1 1760 1705 200 18 40 chrX 154095173 154095553 -12554743 - ORR1D1 LTR MaLR 0 374 3 1 1760 664 115 9 9 chrX 154096551 154096665 -12553631 + (TC)n Simple_repeat Simple_repeat 1 114 0 1 1760 224 319 14 0 chrX 154096758 154096830 -12553466 - PB1D7 SINE Alu -8 112 40 2 1760 528 306 63 88 chrX 154097264 154097709 -12552587 - L1ME3 LINE L1 -6 6156 5723 2 1760 440 315 54 33 chrX 154097852 154098036 -12552260 - L1MDa LINE L1 -6423 210 23 2 1760 237 175 0 81 chrX 154098775 154098837 -12551459 + B1_Mur4 SINE Alu 4 60 -90 2 1760 354 0 0 161 chrX 154098838 154099024 -12551272 + (CAGAG)n Simple_repeat Simple_repeat 5 160 0 2 1760 375 178 50 21 chrX 154099027 154099126 -12551170 + PB1D9 SINE Alu 42 149 0 2 1760 528 226 229 33 chrX 154099139 154099322 -12550974 + ID_B1 SINE B4 1 219 -5 2 1760 293 193 153 47 chrX 154099485 154099675 -12550621 + Charlie5 DNA MER1_type 2410 2619 -5 2 1760 21 0 0 0 chrX 154099812 154099833 -12550463 + AT_rich Low_complexity Low_complexity 1 21 0 2 1760 21 0 0 0 chrX 154100229 154100250 -12550046 + AT_rich Low_complexity Low_complexity 1 21 0 2 1760 991 206 58 14 chrX 154100260 154100467 -12549829 - B3 SINE B2 0 216 1 2 1760 1607 113 4 16 chrX 154100543 154100795 -12549501 - ORR1A2 LTR MaLR 0 327 79 2 1760 1147 130 11 33 chrX 154100795 154100978 -12549318 + B2_Mm2 SINE B2 3 181 -14 2 1760 400 66 330 37 chrX 154101005 154101114 -12549182 + B2_Mm2 SINE B2 47 187 -8 2 1760 450 110 0 79 chrX 154101111 154101200 -12549096 - ORR1A2 LTR MaLR -235 92 11 2 1760 255 61 0 0 chrX 154101857 154101890 -12548406 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 1760 875 195 6 0 chrX 154101981 154102145 -12548151 + B3 SINE B2 46 210 -6 2 1760 351 119 0 0 chrX 154102327 154102394 -12547902 + (TC)n Simple_repeat Simple_repeat 1 67 0 2 1760 546 16 0 0 chrX 154102394 154102457 -12547839 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 1760 505 264 16 0 chrX 154102462 154102583 -12547713 - B3A SINE B2 -75 123 1 2 1760 297 0 0 0 chrX 154102935 154102968 -12547328 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1760 259 269 117 128 chrX 154103554 154103733 -12546563 - MER5B DNA MER1_type 0 178 2 2 1760 450 302 45 81 chrX 154104193 154104416 -12545880 - MTEb LTR MaLR -163 216 2 2 1760 479 385 0 6 chrX 154104498 154104655 -12545641 - LTR16C LTR ERVL -250 239 84 2 1760 1293 213 60 38 chrX 154104849 154105196 -12545100 - ORR1D2 LTR MaLR -15 355 1 2 1760 208 261 0 0 chrX 154105912 154105958 -12544338 + L2c LINE L2 3105 3150 -237 2 1760 323 275 0 0 chrX 154106242 154106311 -12543985 - ID4_ SINE ID -13 70 2 2 1760 365 229 0 0 chrX 154106789 154106859 -12543437 + B1F SINE Alu 5 74 -75 2 1760 288 232 18 0 chrX 154107294 154107350 -12542946 - B1F SINE Alu -92 57 1 2 1760 368 244 26 0 chrX 154107401 154107479 -12542817 - ID4_ SINE ID -1 82 3 2 1760 5435 153 13 41 chrX 154107827 154108852 -12541444 + Lx4B LINE L1 5660 6653 -405 2 1760 712 207 72 121 chrX 154108846 154109110 -12541186 + Lx4B LINE L1 6808 7058 0 2 1760 446 240 142 5 chrX 154109185 154109403 -12540893 - RCHARR1 DNA MER1_type 0 974 727 2 1760 597 231 16 176 chrX 154109397 154109591 -12540705 + B3A SINE B2 30 193 0 2 1760 1219 178 19 0 chrX 154109589 154109848 -12540448 - RCHARR1 DNA MER1_type -233 741 478 2 1760 509 234 209 6 chrX 154109855 154110027 -12540269 + B3 SINE B2 1 207 -9 2 1760 275 340 13 59 chrX 154110027 154110174 -12540122 - RSINE1 SINE B4 -9 156 17 2 1760 1458 252 79 16 chrX 154110191 154110623 -12539673 - RCHARR1 DNA MER1_type -478 496 38 2 1760 875 252 24 0 chrX 154111041 154111251 -12539045 + B3 SINE B2 2 216 0 2 1760 24 32 0 0 chrX 154111822 154111853 -12538443 + AT_rich Low_complexity Low_complexity 1 31 0 2 1760 494 280 82 12 chrX 154112137 154112307 -12537989 - MER58A DNA MER1_type -5 219 38 2 1760 1500 273 48 27 chrX 154112352 154112871 -12537425 + Lx9 LINE L1 6798 7327 -317 2 1760 433 320 27 73 chrX 154113022 154113241 -12537055 + Lx8 LINE L1 7018 7226 -247 2 1760 284 364 10 0 chrX 154113248 154113347 -12536949 + RMER15 LTR ERVL 371 470 -105 2 1760 203 271 24 61 chrX 154113446 154113611 -12536685 + (CATATA)n Simple_repeat Simple_repeat 2 160 0 2 1760 30 0 0 0 chrX 154113629 154113659 -12536637 + AT_rich Low_complexity Low_complexity 1 30 0 2 1760 2406 66 19 9 chrX 154113682 154114005 -12536291 - L1_Mus1 LINE L1 0 6567 6242 2 1760 23176 107 74 7 chrX 154114005 154114888 -12535408 - L1Md_F LINE L1 -555 5328 4455 2 1760 4852 73 31 21 chrX 154114888 154115558 -12534738 - L1Md_F3 LINE L1 -5 6579 5903 2 1760 23176 130 73 14 chrX 154115558 154119710 -12530586 - L1Md_F LINE L1 -1429 4454 98 2 1760 354 356 55 87 chrX 154119852 154120141 -12530155 + MER57D LTR ERV1 132 411 0 2 1760 2238 149 99 0 chrX 154120164 154120539 -12529757 + MTC LTR MaLR 2 413 -8 2 1760 22 0 0 0 chrX 154120757 154120779 -12529517 + AT_rich Low_complexity Low_complexity 1 22 0 2 1760 219 350 95 63 chrX 154120795 154121225 -12529071 + L2 LINE L2 1314 1757 -1662 2 1760 5269 72 13 7 chrX 154122731 154123443 -12526853 - L1Md_F2 LINE L1 -1 6581 5866 2 1760 840 244 23 47 chrX 154123443 154123658 -12526638 - B3 SINE B2 -6 210 1 2 1760 348 287 89 28 chrX 154123670 154123849 -12526447 - HAL1-3A_ME LINE L1 -694 2164 1975 2 1760 389 20 0 20 chrX 154123849 154123900 -12526396 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 1760 282 29 0 0 chrX 154123909 154123944 -12526352 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1760 1566 298 74 14 chrX 154123953 154124524 -12525772 - Lx8 LINE L1 -242 7231 6627 2 1760 250 171 51 70 chrX 154124563 154124663 -12525633 + RMER17A LTR ERVK 322 416 -335 2 1760 763 177 100 0 chrX 154124663 154124793 -12525503 - B1_Mur4 SINE Alu -6 144 2 2 1760 250 171 51 70 chrX 154124793 154124849 -12525447 + RMER17A LTR ERVK 417 475 -276 2 1760 275 270 80 36 chrX 154124907 154124997 -12525299 - B1F1 SINE Alu -6 114 30 2 1760 225 282 25 25 chrX 154125096 154125176 -12525120 - MTEb LTR MaLR -6 373 294 2 1760 347 246 675 0 chrX 154125404 154125524 -12524772 + RMER30 DNA MER1_type 1 201 -1 2 1760 29 78 0 0 chrX 154125850 154125914 -12524382 + AT_rich Low_complexity Low_complexity 1 64 0 2 1760 631 272 18 31 chrX 154125921 154126084 -12524212 - RSINE1 SINE B4 0 165 5 2 1760 314 270 40 0 chrX 154126213 154126287 -12524009 - PB1D10 SINE Alu 0 117 41 2 1760 1818 245 40 45 chrX 154126371 154126958 -12523338 - Lx6 LINE L1 -31 7429 6492 2 1760 3028 66 51 22 chrX 154126961 154127410 -12522886 + L1Md_F2 LINE L1 6098 6559 -23 2 1760 378 340 6 18 chrX 154127447 154127612 -12522684 - Lx6 LINE L1 -725 6735 6573 2 1760 619 277 15 41 chrX 154127578 154127774 -12522522 + Lx5 LINE L1 6189 6379 -671 2 1760 381 22 0 0 chrX 154127858 154127904 -12522392 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1760 477 0 0 0 chrX 154127904 154127956 -12522340 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 1760 875 261 14 88 chrX 154127956 154128250 -12522046 - B4 SINE B4 -19 273 2 2 1760 411 106 166 0 chrX 154128326 154128423 -12521873 - B2_Mm2 SINE B2 -14 181 48 2 1760 1286 86 11 0 chrX 154128438 154128613 -12521683 - B2_Mm1t SINE B2 -15 178 2 2 1760 414 0 0 0 chrX 154128616 154128662 -12521634 + (TTTA)n Simple_repeat Simple_repeat 4 49 0 2 1760 962 110 0 7 chrX 154128662 154128799 -12521497 - B1_Mus1 SINE Alu -12 136 1 2 1760 1591 241 113 24 chrX 154128904 154129355 -12520941 - MER21B LTR ERV1 -101 762 272 2 1760 1007 241 15 29 chrX 154129769 154129974 -12520322 - B3 SINE B2 -13 203 2 2 1760 30 45 0 0 chrX 154130067 154130111 -12520185 + AT_rich Low_complexity Low_complexity 1 44 0 2 1760 3864 44 15 2 chrX 154130111 154130585 -12519711 - L1_Mus1 LINE L1 -4 6563 6084 2 1760 212 354 69 8 chrX 154131239 154131370 -12518926 + L2a LINE L2 3283 3421 -5 2 1760 298 306 110 7 chrX 154131396 154131541 -12518755 + RSINE1 SINE B4 2 161 -4 2 1760 282 73 0 0 chrX 154131551 154131592 -12518704 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1760 26 0 0 0 chrX 154132247 154132273 -12518023 + AT_rich Low_complexity Low_complexity 1 26 0 2 1760 652 270 0 69 chrX 154132273 154132380 -12517916 - RSINE1 SINE B4 0 165 61 2 1760 4046 44 10 2 chrX 154132380 154132879 -12517417 + L1Md_F2 LINE L1 6079 6581 -1 2 1760 652 270 0 69 chrX 154132879 154132946 -12517350 - RSINE1 SINE B4 -105 60 4 2 1760 325 186 33 66 chrX 154133011 154133117 -12517179 - Lx6 LINE L1 -27 7433 7333 2 1760 1180 53 0 0 chrX 154133117 154133268 -12517028 + L1_Mus2 LINE L1 6415 6565 -1 2 1760 325 186 33 66 chrX 154133268 154133282 -12517014 - Lx6 LINE L1 -128 7332 7318 2 1760 597 128 0 0 chrX 154133320 154133445 -12516851 + (GA)n Simple_repeat Simple_repeat 1 125 0 2 1760 523 256 86 0 chrX 154133457 154133574 -12516722 - B3A SINE B2 -70 128 2 2 1760 1095 114 50 22 chrX 154133763 154133943 -12516353 - B2_Mm2 SINE B2 -9 186 2 2 1760 589 268 71 16 chrX 154134036 154134218 -12516078 + B3A SINE B2 1 192 -6 2 1760 248 363 129 12 chrX 154134748 154134918 -12515378 + MLT1L LTR MaLR 347 536 -74 2 1760 533 248 0 0 chrX 154135119 154135228 -12515068 + B1_Mur2 SINE Alu 40 148 -1 2 1760 252 0 0 0 chrX 154135359 154135387 -12514909 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 1760 733 220 14 0 chrX 154136137 154136278 -12514018 - B1_Mur2 SINE Alu -2 147 5 2 1760 203 250 0 0 chrX 154137406 154137446 -12512850 + (CGTG)n Simple_repeat Simple_repeat 2 41 0 2 1760 334 232 138 9 chrX 154139474 154139631 -12510665 - Lx4B LINE L1 -97 6961 6682 2 1760 195 314 180 8 chrX 154139723 154139845 -12510451 - MIRc SINE MIR -31 237 95 2 1761 1747 122 14 7 chrX 154141321 154141602 -12508694 + Lx4A LINE L1 6770 7052 -6 2 1761 288 219 0 0 chrX 154141604 154141686 -12508610 + (TATG)n Simple_repeat Simple_repeat 3 84 0 2 1761 234 200 45 15 chrX 154141686 154141752 -12508544 + L1MA5 LINE L1 6227 6294 -6 2 1761 321 269 0 0 chrX 154141889 154141956 -12508340 + tRNA-Ala-GCA tRNA tRNA 1 67 -8 2 1761 378 0 0 0 chrX 154143317 154143359 -12506937 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1761 612 210 187 33 chrX 154143736 154143918 -12506378 - B3 SINE B2 -5 211 2 3 1761 206 362 0 12 chrX 154144024 154144105 -12506191 - L2c LINE L2 -26 3361 3282 3 1761 478 324 16 21 chrX 154144109 154144301 -12505995 + MIR SINE MIR 72 262 0 3 1761 414 323 118 25 chrX 154145085 154145288 -12505008 - MER58A DNA MER1_type 0 224 3 3 1761 1019 96 7 0 chrX 154146049 154146185 -12504111 + B1_Mus1 SINE Alu 5 141 -7 3 1761 493 321 91 8 chrX 154146764 154147006 -12503290 - Tigger13a DNA MER2_type -41 730 469 3 1761 309 0 0 0 chrX 154149295 154149332 -12500964 - tRNA-Gly-GGA tRNA tRNA -38 37 1 3 1761 320 184 121 17 chrX 154149414 154149530 -12500766 - Lx9 LINE L1 0 7644 7517 3 1761 1284 90 0 0 chrX 154149537 154149816 -12500480 + (CA)n Simple_repeat Simple_repeat 1 279 0 3 1761 997 228 51 58 chrX 154149829 154150141 -12500155 - Lx9 LINE L1 -355 7289 6980 3 1761 188 170 37 60 chrX 154150209 154150281 -12500015 - MIR SINE MIR -39 169 101 3 1761 285 175 125 16 chrX 154150618 154150647 -12499649 - PB1D7 SINE Alu -23 97 67 3 1761 559 82 0 67 chrX 154150647 154150751 -12499545 - L1Md_F2 LINE L1 0 6582 6486 3 1761 285 175 125 16 chrX 154150751 154150785 -12499511 - PB1D7 SINE Alu -54 66 27 3 1761 488 296 0 9 chrX 154151056 154151172 -12499124 + PB1 SINE Alu 3 117 -10 3 1761 276 369 7 78 chrX 154151172 154151196 -12499100 + ID_B1 SINE B4 84 213 -11 3 1761 974 263 93 45 chrX 154152971 154153305 -12496991 - RMER12 LTR ERVK -6 1316 967 3 1761 222 118 0 0 chrX 154153321 154153355 -12496941 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 3 1761 3736 155 62 22 chrX 154153376 154154101 -12496195 - RMER12 LTR ERVK -568 754 1 3 1761 286 340 98 43 chrX 154155759 154155922 -12494374 + MIR SINE MIR 57 228 -34 3 1761 561 15 0 0 chrX 154157380 154157446 -12492850 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 1761 522 0 0 0 chrX 154157584 154157642 -12492654 + (GA)n Simple_repeat Simple_repeat 1 58 0 3 1761 235 387 80 38 chrX 154157729 154157941 -12492355 - LTR16B2 LTR ERVL -239 223 3 3 1761 503 291 15 0 chrX 154159907 154160041 -12490255 - B1F SINE Alu -13 136 1 3 1761 195 220 0 0 chrX 154160330 154160380 -12489916 + CT-rich Low_complexity Low_complexity 3 52 0 3 1761 422 321 0 0 chrX 154160383 154160489 -12489807 - PB1D10 SINE Alu -11 106 1 3 1761 256 302 42 92 chrX 154160790 154160932 -12489364 + RMER12 LTR ERVK 711 845 -477 3 1761 681 92 0 0 chrX 154160950 154161048 -12489248 + (TCTA)n Simple_repeat Simple_repeat 4 101 0 3 1761 910 266 4 65 chrX 154161048 154161277 -12489019 - B4A SINE B4 -77 215 1 3 1761 186 43 0 0 chrX 154161291 154161314 -12488982 + (TC)n Simple_repeat Simple_repeat 2 24 0 3 1761 351 179 0 0 chrX 154161336 154161403 -12488893 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 1761 393 39 0 0 chrX 154161403 154161454 -12488842 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 1761 291 337 19 29 chrX 154161524 154161628 -12488668 - RSINE1 SINE B4 -4 161 59 3 1761 974 332 98 30 chrX 154162025 154162650 -12487646 - Lx8 LINE L1 -375 7098 6432 3 1761 640 304 6 17 chrX 154162777 154162951 -12487345 - B4A SINE B4 -68 224 53 3 1761 773 287 90 37 chrX 154164115 154164604 -12485692 - L1MA5 LINE L1 -28 6272 5758 3 1761 704 212 119 0 chrX 154164641 154164834 -12485462 + B3 SINE B2 1 216 0 3 1761 282 320 125 0 chrX 154164841 154164969 -12485327 - Charlie20a DNA Charlie -589 218 75 3 1761 185 153 44 132 chrX 154165035 154165103 -12485193 + L2 LINE L2 2608 2669 -750 3 1761 607 301 136 8 chrX 154165274 154165382 -12484914 + L1M4 LINE L1 2455 2571 -3569 3 1761 665 257 0 0 chrX 154165382 154165518 -12484778 + B1F SINE Alu 5 140 -9 3 1761 851 245 102 19 chrX 154165518 154165947 -12484349 + L1M4 LINE L1 2572 3058 -3088 3 1761 420 325 0 40 chrX 154166062 154166187 -12484109 + PB1D7 SINE Alu 1 120 0 3 1761 438 212 227 19 chrX 154167289 154167443 -12482853 + MER20 DNA MER1_type 32 217 -2 3 1761 329 221 10 0 chrX 154170537 154170641 -12479655 + CT-rich Low_complexity Low_complexity 4 108 0 3 1761 268 226 79 16 chrX 154171215 154171278 -12479018 - ID4 SINE ID -10 73 7 3 1761 657 287 25 25 chrX 154171309 154171470 -12478826 + RSINE1 SINE B4 5 165 0 3 1761 189 0 0 0 chrX 154171527 154171548 -12478748 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1761 261 0 0 0 chrX 154171548 154171576 -12478720 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 1761 450 0 0 0 chrX 154171606 154171656 -12478640 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1761 261 0 0 0 chrX 154171656 154171684 -12478612 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 1761 384 342 10 56 chrX 154172420 154172618 -12477678 - L3 LINE CR1 -782 3707 3519 3 1761 519 306 42 48 chrX 154172826 154173015 -12477281 - MER5A DNA MER1_type 0 189 2 3 1761 181 299 11 54 chrX 154173232 154173324 -12476972 - MIRb SINE MIR -119 149 62 3 1761 775 259 89 45 chrX 154173748 154173995 -12476301 - B4A SINE B4 -20 272 15 3 1761 1001 164 7 0 chrX 154175068 154175214 -12475082 - B1_Mur4 SINE Alu -3 147 1 3 1761 1181 50 43 0 chrX 154175272 154175413 -12474883 + B1_Mus2 SINE Alu 1 147 0 3 1761 1917 284 36 15 chrX 154175424 154176117 -12474179 - Lx5 LINE L1 -9 7041 6455 3 1761 460 326 220 4 chrX 154176538 154176818 -12473478 - MLT1F LTR MaLR -98 471 103 3 1761 387 0 0 0 chrX 154176896 154176939 -12473357 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1761 335 179 35 58 chrX 154177012 154177184 -12473112 + CT-rich Low_complexity Low_complexity 4 171 0 3 1761 333 319 103 0 chrX 154177218 154177334 -12472962 - B1F2 SINE Alu -21 128 1 3 1761 186 43 0 0 chrX 154178502 154178525 -12471771 + (TTG)n Simple_repeat Simple_repeat 1 23 0 3 1761 204 97 0 0 chrX 154178540 154178571 -12471725 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1761 465 265 42 44 chrX 154178574 154178732 -12471564 - RSINE1 SINE B4 -1 164 5 3 1761 225 205 0 0 chrX 154178975 154179014 -12471282 - RLTR20C LTR ERVK -412 122 84 3 1761 394 287 72 13 chrX 154179678 154179830 -12470466 + MER5A1 DNA MER1_type 1 161 -5 3 1761 567 212 101 13 chrX 154179843 154180001 -12470295 - MER5B DNA MER1_type -2 176 5 3 1761 9606 12 3 0 chrX 154180132 154181927 -12468369 - L1Md_T LINE L1 0 6582 4781 3 1761 668 190 20 105 chrX 154181959 154182112 -12468184 + B1_Mur2 SINE Alu 4 143 -6 3 1761 1423 66 32 11 chrX 154182277 154182439 -12467857 + B2_Mm2 SINE B2 1 162 -33 3 1761 765 85 0 0 chrX 154182439 154182545 -12467751 + (TA)n Simple_repeat Simple_repeat 2 107 0 3 1761 1423 66 32 11 chrX 154182545 154182567 -12467729 + B2_Mm2 SINE B2 163 188 -7 3 1761 382 271 208 11 chrX 154182602 154182785 -12467511 + ID_B1 SINE B4 1 219 -5 3 1761 28 48 0 0 chrX 154182853 154182895 -12467401 + AT_rich Low_complexity Low_complexity 1 42 0 3 1761 7381 98 19 9 chrX 154182911 154183939 -12466357 - Lx3A LINE L1 -4 6977 5940 3 1761 621 243 13 167 chrX 154184503 154184730 -12465566 - B3A SINE B2 -5 193 2 3 1761 250 370 0 0 chrX 154185540 154185632 -12464664 + MIRc SINE MIR 159 250 -18 3 1761 822 261 128 48 chrX 154187824 154188223 -12462073 + L1MB1 LINE L1 5740 6157 -11 3 1761 297 0 0 0 chrX 154188223 154188256 -12462040 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1761 289 308 82 27 chrX 154188344 154188454 -12461842 + MIRc SINE MIR 11 126 -142 3 1761 242 320 31 31 chrX 154188938 154189067 -12461229 - MLT1H LTR MaLR -8 541 413 3 1761 340 284 85 16 chrX 154189223 154189352 -12460944 - MLT1H LTR MaLR -377 172 35 3 1761 1166 261 130 3 chrX 154189658 154190042 -12460254 + L1MA7 LINE L1 5850 6282 -9 3 1761 351 264 37 9 chrX 154190921 154191028 -12459268 + PB1D10 SINE Alu 3 112 -5 3 1761 237 268 155 0 chrX 154191913 154191984 -12458312 + ID4 SINE ID 2 83 0 3 1761 269 297 9 106 chrX 154192005 154192118 -12458178 + ID_B1 SINE B4 78 179 -45 3 1761 421 316 0 17 chrX 154192019 154192135 -12458161 + PB1 SINE Alu 12 125 -2 3 1761 189 0 0 0 chrX 154193659 154193680 -12456616 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1761 716 270 86 11 chrX 154195686 154195873 -12454423 - RMER30 DNA MER1_type 0 202 2 3 1761 570 215 33 53 chrX 154196482 154196634 -12453662 + B1_Mur1 SINE Alu 1 149 0 3 1761 225 263 0 62 chrX 154196643 154196724 -12453572 + GA-rich Low_complexity Low_complexity 2 77 0 3 1761 23 0 0 0 chrX 154197785 154197808 -12452488 + AT_rich Low_complexity Low_complexity 1 23 0 3 1761 2516 171 25 20 chrX 154197810 154198252 -12452044 - Lx2B LINE L1 0 7000 6557 3 1761 4712 201 99 75 chrX 154199024 154200524 -12449772 - RMER1A Other Other -3 1027 1 3 1761 316 259 148 0 chrX 154201018 154201126 -12449170 - Lx9 LINE L1 -206 7438 7315 3 1761 39019 45 0 3 chrX 154201124 154207739 -12442557 - L1Md_T LINE L1 0 6585 1 3 1761 499 274 97 62 chrX 154207738 154208065 -12442231 - Lx9 LINE L1 -317 7327 6955 3 1761 468 315 120 15 chrX 154208964 154209238 -12441058 + Charlie2a DNA MER1_type 1521 1823 -1038 3 1761 2036 136 13 131 chrX 154209244 154209709 -12440587 + RMER17C LTR ERVK 1 410 0 3 1761 32721 105 17 2 chrX 154209738 154215447 -12434849 + L1_Mus1 LINE L1 467 6264 -303 3 1761 221 320 13 0 chrX 154215514 154215589 -12434707 + MIRb SINE MIR 182 257 -11 3 1761 2025 59 43 8 chrX 154215906 154216161 -12434135 + L1_Mus1 LINE L1 6302 6565 -2 3 1761 758 99 81 47 chrX 154216268 154216434 -12433862 + Lx3A LINE L1 4613 4797 -1089 3 1761 9663 93 25 12 chrX 154216428 154218004 -12432292 + Lx3A LINE L1 5389 6981 0 3 1761 35 24 0 0 chrX 154218009 154218051 -12432245 + AT_rich Low_complexity Low_complexity 1 42 0 3 1761 317 333 80 0 chrX 154218061 154218223 -12432073 + MER63C DNA AcHobo 506 680 -250 4 1761 266 176 20 0 chrX 154218587 154218638 -12431658 - MLT1D LTR MaLR -5 622 571 4 1761 823 275 5 28 chrX 154218653 154218870 -12431426 + B4 SINE B4 2 213 -79 4 1761 972 281 94 25 chrX 154219023 154219368 -12430928 + MLT1A LTR MaLR 5 374 0 4 1761 451 344 19 13 chrX 154219410 154219566 -12430730 - MLT1D LTR MaLR -348 157 1 4 1761 656 263 113 0 chrX 154219669 154219863 -12430433 - B3 SINE B2 0 216 1 4 1761 246 202 202 53 chrX 154220167 154220261 -12430035 - MER5B DNA MER1_type -69 109 2 4 1761 291 286 14 28 chrX 154220778 154220850 -12429446 + ID4_ SINE ID 2 72 -11 4 1761 1172 165 80 0 chrX 154220887 154221087 -12429209 + B3 SINE B2 1 216 0 4 1761 516 274 13 19 chrX 154221129 154221285 -12429011 - MLT1D LTR MaLR -17 488 334 4 1761 697 318 81 62 chrX 154221307 154221676 -12428620 - MLT1D LTR MaLR -129 376 1 4 1761 546 245 145 14 chrX 154222742 154222887 -12427409 + RSINE1 SINE B4 2 165 0 4 1761 356 312 36 14 chrX 154224694 154224834 -12425462 - L1MC5 LINE L1 -33 7928 7786 4 1761 422 238 89 0 chrX 154224842 154224943 -12425353 + RSINE1 SINE B4 3 112 -53 4 1761 220 247 41 51 chrX 154225146 154225244 -12425052 - MIRb SINE MIR -57 211 115 4 1761 636 223 0 0 chrX 154226172 154226284 -12424012 - B1F SINE Alu -21 128 17 4 1761 711 309 31 10 chrX 154226412 154226605 -12423691 - B3A SINE B2 0 198 2 4 1761 393 339 58 13 chrX 154226638 154226946 -12423350 + L1_Mur3 LINE L1 104 425 -7303 4 1761 2109 172 28 8 chrX 154227005 154227811 -12422485 + L1_Mur3 LINE L1 860 1630 -4250 4 1761 1832 153 36 34 chrX 154227819 154228204 -12422092 - LTRIS4 LTR ERV1 0 507 122 4 1761 534 188 66 20 chrX 154228263 154228415 -12421881 + L1_Mur3 LINE L1 1642 1800 -4080 4 1761 2740 147 2 0 chrX 154228412 154228883 -12421413 - L1_Mur2 LINE L1 -1647 4230 3759 4 1761 4520 145 64 18 chrX 154228884 154228902 -12421394 + Lx4B LINE L1 6203 6219 -839 4 1761 1856 136 42 74 chrX 154228902 154229282 -12421014 - RLTR9A LTR ERVK 0 368 1 4 1761 4520 145 64 18 chrX 154229282 154230078 -12420218 + Lx4B LINE L1 6220 7054 -4 4 1761 2564 221 96 14 chrX 154230100 154230319 -12419977 + L1_Mur3 LINE L1 1784 2057 -3823 4 1761 195 42 0 0 chrX 154230319 154230343 -12419953 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 1761 2564 193 53 7 chrX 154230343 154230883 -12419413 + L1_Mur3 LINE L1 2058 2622 -3258 4 1761 1612 151 76 20 chrX 154230877 154231283 -12419013 + L1_Mur3 LINE L1 3071 3499 -2381 4 1761 1257 90 0 0 chrX 154231300 154231477 -12418819 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 4 1761 685 174 7 7 chrX 154231483 154231588 -12418708 + polypyrimidine Low_complexity Low_complexity 47 151 0 4 1761 1266 90 0 0 chrX 154231588 154231766 -12418530 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 4 1761 333 0 0 0 chrX 154231768 154231805 -12418491 + (TTCC)n Simple_repeat Simple_repeat 4 40 0 4 1761 685 174 7 7 chrX 154231805 154231846 -12418450 + polypyrimidine Low_complexity Low_complexity 5 46 0 4 1761 9716 108 6 4 chrX 154231849 154233560 -12416736 - Lx2 LINE L1 0 6997 5278 4 1761 333 101 12 81 chrX 154233641 154233727 -12416569 - Lx2 LINE L1 -587 5293 5214 4 1761 2808 222 72 6 chrX 154233731 154234473 -12415823 + Lx5 LINE L1 6257 7047 -3 4 1761 2346 105 12 0 chrX 154235324 154235647 -12414649 - ORR1A2 LTR MaLR 0 327 1 4 1761 490 173 174 162 chrX 154235912 154235950 -12414346 - RMER6D LTR ERVK -410 346 315 4 1761 2551 124 51 38 chrX 154235950 154236419 -12413877 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1761 490 173 174 162 chrX 154236419 154236440 -12413856 - RMER6D LTR ERVK -442 314 298 4 1761 4875 55 13 0 chrX 154236440 154237060 -12413236 + L1_Mus1 LINE L1 5939 6566 -1 4 1761 718 147 279 8 chrX 154237060 154237234 -12413062 - RMER6D LTR ERVK -393 327 109 4 1761 7558 86 1 3 chrX 154237241 154238388 -12411908 - RLTR45-int LTR ERVK -456 7761 6331 4 1761 2611 41 0 0 chrX 154238734 154239054 -12411242 - RLTR45-int LTR ERVK -5596 1648 1329 4 1761 387 250 70 94 chrX 154239607 154239735 -12410561 - B1F SINE Alu -5 144 20 4 1761 1056 303 47 13 chrX 154239887 154240382 -12409914 - L1MA4A LINE L1 -1571 5902 5419 4 1761 448 253 94 5 chrX 154240549 154240740 -12409556 + L1MB3 LINE L1 5058 5265 -881 4 1761 1133 51 0 0 chrX 154240819 154240956 -12409340 + B1_Mus2 SINE Alu 1 137 -10 4 1761 324 0 38 38 chrX 154240957 154241010 -12409286 + (CAAAA)n Simple_repeat Simple_repeat 3 55 0 4 1761 594 147 43 0 chrX 154241027 154241143 -12409153 + L1MB3 LINE L1 5612 5732 -451 4 1761 400 246 185 5 chrX 154241171 154241427 -12408869 + L1MB3 LINE L1 5847 6142 -41 4 1761 495 0 0 0 chrX 154241440 154241495 -12408801 + (TA)n Simple_repeat Simple_repeat 2 56 0 4 1761 192 40 0 0 chrX 154241653 154241678 -12408618 + (CAGGC)n Simple_repeat Simple_repeat 2 26 0 4 1761 1824 158 62 40 chrX 154241960 154242330 -12407966 - ORR1C1 LTR MaLR 0 378 1 4 1761 6269 146 30 12 chrX 154242389 154243835 -12406461 + Lx2B LINE L1 5457 6986 -11 4 1761 1376 161 15 11 chrX 154243853 154244123 -12406173 - Lx6 LINE L1 -1530 5930 5660 4 1761 291 236 14 14 chrX 154244124 154244197 -12406099 + Lx6 LINE L1 6291 6363 -687 4 1761 1097 263 130 41 chrX 154244227 154244731 -12405565 + Lx6 LINE L1 6506 7430 -30 4 1761 297 0 0 0 chrX 154244731 154244764 -12405532 + (TAA)n Simple_repeat Simple_repeat 3 35 0 4 1761 2166 135 35 9 chrX 154245280 154245623 -12404673 + ORR1B1 LTR MaLR 41 392 -2 4 1761 2100 128 14 23 chrX 154245800 154246151 -12404145 + Lx2 LINE L1 6501 6848 -149 4 1761 209 254 113 0 chrX 154246151 154246222 -12404074 - MER5A DNA MER1_type -71 118 40 4 1761 184 300 72 58 chrX 154246254 154246392 -12403904 - MER5A DNA MER1_type -14 175 36 4 1761 797 265 118 4 chrX 154246753 154246999 -12403297 + RMER5 LTR ERV1 13 286 -248 4 1761 2188 185 16 88 chrX 154247002 154247579 -12402717 + RLTR25A LTR ERVK 5 516 -587 4 1761 405 0 0 0 chrX 154247579 154247624 -12402672 + (TAA)n Simple_repeat Simple_repeat 3 47 0 4 1761 2260 184 68 8 chrX 154247624 154248095 -12402201 + RLTR25A LTR ERVK 397 895 -208 4 1761 189 0 0 0 chrX 154248118 154248139 -12402157 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1761 410 209 94 9 chrX 154248267 154248373 -12401923 + RLTR25A LTR ERVK 899 1077 -26 4 1761 347 261 10 42 chrX 154248471 154248567 -12401729 + RMER5 LTR ERV1 421 513 -21 4 1761 732 23 0 0 chrX 154248769 154248855 -12401441 + (GA)n Simple_repeat Simple_repeat 1 86 0 4 1761 232 345 111 37 chrX 154249543 154249787 -12400509 - L3 LINE CR1 -232 4257 3996 4 1761 3676 113 20 2 chrX 154250039 154250588 -12399708 + Lx2 LINE L1 6439 6997 0 4 1761 185 229 83 0 chrX 154250822 154250870 -12399426 - MER5A DNA MER1_type -38 151 100 4 1761 879 214 69 5 chrX 154250908 154251110 -12399186 - B3 SINE B2 0 216 2 4 1761 914 216 31 63 chrX 154251238 154251460 -12398836 - B3 SINE B2 0 216 2 4 1761 21 36 0 0 chrX 154251831 154251859 -12398437 + AT_rich Low_complexity Low_complexity 1 28 0 4 1761 790 292 14 7 chrX 154251948 154252171 -12398125 - B4A SINE B4 -3 289 69 4 1761 915 293 110 3 chrX 154252883 154253174 -12397122 + MLT1A0 LTR MaLR 1 322 -43 4 1761 21 36 0 0 chrX 154253241 154253269 -12397027 + AT_rich Low_complexity Low_complexity 1 28 0 4 1761 681 227 21 7 chrX 154253952 154254094 -12396202 - B1_Mur1 SINE Alu -5 144 1 4 1761 1118 168 33 19 chrX 154254308 154254520 -12395776 - B3 SINE B2 0 216 2 4 1761 182 91 0 29 chrX 154254623 154254657 -12395639 + (TTTTTG)n Simple_repeat Simple_repeat 6 38 0 4 1761 213 178 0 0 chrX 154257308 154257353 -12392943 + GA-rich Low_complexity Low_complexity 2 46 0 4 1761 186 43 0 0 chrX 154258739 154258762 -12391534 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 1761 396 0 0 0 chrX 154260671 154260715 -12389581 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1761 257 303 0 13 chrX 154262818 154262895 -12387401 + GA-rich Low_complexity Low_complexity 4 79 0 4 1761 298 235 78 0 chrX 154262944 154263059 -12387237 + Lx7 LINE L1 7294 7417 -279 4 1761 198 0 0 0 chrX 154263546 154263568 -12386728 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 1761 662 180 0 147 chrX 154265095 154265258 -12385038 - B1F SINE Alu -9 140 2 4 1761 22 35 0 0 chrX 154265258 154265287 -12385009 + AT_rich Low_complexity Low_complexity 1 29 0 4 1761 262 302 16 4 chrX 154265691 154265773 -12384523 - MIRb SINE MIR -5 257 176 4 1761 360 236 0 53 chrX 154267068 154267144 -12383152 - ID4 SINE ID -11 72 1 4 1761 27 29 0 0 chrX 154267235 154267269 -12383027 + AT_rich Low_complexity Low_complexity 1 34 0 4 1761 31 0 0 0 chrX 154271504 154271535 -12378761 + AT_rich Low_complexity Low_complexity 1 31 0 4 1762 209 348 65 11 chrX 154273632 154273725 -12376571 + MER5A DNA MER1_type 91 188 -1 4 1762 893 186 78 7 chrX 154274024 154274301 -12375995 - RMER17B LTR ERVK -520 438 16 4 1762 1293 125 0 9 chrX 154274304 154274514 -12375782 - RMER17C-int LTR ERVK 0 3238 3031 4 1762 1511 252 20 13 chrX 154274816 154275214 -12375082 + Lx6 LINE L1 7034 7434 -26 4 1762 189 0 0 0 chrX 154275662 154275683 -12374613 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 4 1762 512 128 105 11 chrX 154275683 154275778 -12374518 - B1_Mus2 SINE Alu -33 114 11 4 1762 396 180 76 48 chrX 154275685 154275790 -12374506 - MT2B LTR ERVL -337 264 157 4 1762 270 292 0 0 chrX 154276330 154276395 -12373901 - ID4_ SINE ID -17 66 2 4 1762 25 0 0 0 chrX 154278158 154278183 -12372113 + AT_rich Low_complexity Low_complexity 1 25 0 4 1762 241 232 14 28 chrX 154278215 154278286 -12372010 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 4 1762 23 0 0 0 chrX 154278803 154278826 -12371470 + AT_rich Low_complexity Low_complexity 1 23 0 4 1762 307 330 28 37 chrX 154279124 154279231 -12371065 + PB1D9 SINE Alu 1 106 -14 4 1762 405 308 133 15 chrX 154279972 154280107 -12370189 - B3A SINE B2 -19 179 29 4 1762 668 157 3 6 chrX 154281085 154281210 -12369086 + ORR1A3 LTR MaLR 176 343 -51 4 1762 563 325 9 85 chrX 154281519 154281731 -12368565 + B3A SINE B2 3 198 0 4 1762 22 80 0 0 chrX 154282529 154282579 -12367717 + AT_rich Low_complexity Low_complexity 1 50 0 4 1762 206 304 170 61 chrX 154283047 154283194 -12367102 + L3 LINE CR1 4277 4439 -50 4 1762 21 0 0 0 chrX 154284366 154284387 -12365909 + AT_rich Low_complexity Low_complexity 1 21 0 4 1762 342 0 0 0 chrX 154285017 154285055 -12365241 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1762 378 0 0 0 chrX 154285061 154285103 -12365193 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 1762 397 231 21 21 chrX 154285145 154285238 -12365058 - B3A SINE B2 -105 93 1 4 1762 598 197 92 15 chrX 154288318 154288528 -12361768 + Lx4B LINE L1 6710 7021 -37 4 1762 528 333 0 21 chrX 154290269 154290410 -12359886 - ID_B1 SINE B4 -2 222 85 4 1762 198 143 0 0 chrX 154291055 154291090 -12359206 + (TCC)n Simple_repeat Simple_repeat 2 36 0 5 1762 3980 63 2 26 chrX 154291719 154292256 -12358040 - L1_Mus1 LINE L1 0 6567 6044 5 1762 373 167 83 64 chrX 154292668 154292777 -12357519 + Lx3B LINE L1 6862 6972 -1 5 1762 26 0 0 0 chrX 154293426 154293452 -12356844 + AT_rich Low_complexity Low_complexity 1 26 0 5 1762 1604 191 127 23 chrX 154293871 154294225 -12356071 + MTD LTR MaLR 29 419 0 5 1762 396 0 0 0 chrX 154295115 154295159 -12355137 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1762 213 321 0 0 chrX 154295975 154296031 -12354265 + B1F1 SINE Alu 1 56 -93 5 1762 306 293 141 67 chrX 154296166 154296381 -12353915 + MIR SINE MIR 11 235 -33 5 1762 21 36 0 0 chrX 154297126 154297154 -12353142 + AT_rich Low_complexity Low_complexity 1 28 0 5 1762 331 310 45 53 chrX 154297375 154297620 -12352676 - L1MA6 LINE L1 -110 6190 5948 5 1762 235 262 124 53 chrX 154298513 154298626 -12351670 - LTR87 LTR ERVL? -20 604 484 5 1762 219 69 0 0 chrX 154298860 154298889 -12351407 + (TTC)n Simple_repeat Simple_repeat 1 29 0 5 1762 28 0 0 0 chrX 154299531 154299559 -12350737 + AT_rich Low_complexity Low_complexity 1 28 0 5 1762 329 376 51 12 chrX 154300157 154300410 -12349886 - L2a LINE L2 -10 3416 3154 5 1762 243 88 0 0 chrX 154300767 154300801 -12349495 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 1762 2142 68 0 0 chrX 154301568 154301846 -12348450 - L1_Mus1 LINE L1 0 6567 6290 5 1762 224 341 0 22 chrX 154302427 154302517 -12347779 - MIR SINE MIR -63 145 58 5 1762 3289 38 5 0 chrX 154302725 154303119 -12347177 + MTA_Mm LTR MaLR 1 396 0 5 1762 431 211 186 34 chrX 154303981 154304099 -12346197 + B1_Mur2 SINE Alu 1 136 -13 5 1762 264 340 89 40 chrX 154304158 154304259 -12346037 - RSINE1 SINE B4 -16 149 44 5 1762 23 0 0 0 chrX 154304773 154304796 -12345500 + AT_rich Low_complexity Low_complexity 1 23 0 5 1762 3681 141 29 3 chrX 154304796 154305389 -12344907 + Lx5 LINE L1 6440 7047 -3 5 1762 32 43 0 42 chrX 154305407 154305479 -12344817 + AT_rich Low_complexity Low_complexity 1 69 0 5 1762 217 232 0 0 chrX 154305551 154305607 -12344689 + A-rich Low_complexity Low_complexity 4 59 0 5 1762 582 281 37 8 chrX 154305681 154305856 -12344440 - B3 SINE B2 -6 210 28 5 1762 28 29 0 0 chrX 154305864 154305899 -12344397 + AT_rich Low_complexity Low_complexity 1 35 0 5 1762 293 93 0 0 chrX 154306319 154306362 -12343934 - Lx3A LINE L1 -206 6775 6733 5 1762 944 142 20 50 chrX 154306362 154306562 -12343734 + Lx3B LINE L1 6775 6968 -5 5 1762 288 0 0 0 chrX 154306565 154306597 -12343699 + (TAA)n Simple_repeat Simple_repeat 3 34 0 5 1762 313 198 25 0 chrX 154306728 154306809 -12343487 + (TA)n Simple_repeat Simple_repeat 2 84 0 5 1762 445 162 38 0 chrX 154306870 154306950 -12343346 + MTC LTR MaLR 8 90 -331 5 1762 2351 201 31 147 chrX 154306956 154307657 -12342639 - RMER1C Other Other 0 1342 723 5 1762 224 245 0 0 chrX 154307828 154307877 -12342419 + (TATG)n Simple_repeat Simple_repeat 2 50 0 5 1762 390 108 0 0 chrX 154308868 154308933 -12341363 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 1762 182 317 72 12 chrX 154310682 154310765 -12339531 + L2 LINE L2 1077 1164 -2255 5 1762 194 219 16 0 chrX 154311268 154311332 -12338964 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 1762 585 317 10 34 chrX 154312766 154312975 -12337321 + B3 SINE B2 1 204 -12 5 1762 1000 156 56 15 chrX 154313240 154313435 -12336861 + Lx9 LINE L1 7256 7458 -186 5 1762 381 43 0 0 chrX 154313436 154313483 -12336813 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1762 308 91 36 18 chrX 154313483 154313539 -12336757 + Lx9 LINE L1 7519 7575 -69 5 1762 190 298 129 24 chrX 154315084 154315208 -12335088 - MIRc SINE MIR -131 137 1 5 1762 490 341 50 36 chrX 154315962 154316184 -12334112 + L2 LINE L2 2589 2813 -606 5 1762 28 20 0 56 chrX 154316988 154317042 -12333254 + AT_rich Low_complexity Low_complexity 1 51 0 5 1762 351 95 32 0 chrX 154317042 154317105 -12333191 - Lx2 LINE L1 -1 6996 6932 5 1762 733 228 84 20 chrX 154317151 154317402 -12332894 + L1MD LINE L1 2695 2961 -3185 5 1762 1149 43 31 0 chrX 154317480 154317642 -12332654 + (TTTTC)n Simple_repeat Simple_repeat 3 169 0 5 1762 203 170 21 0 chrX 154317656 154317703 -12332593 + T-rich Low_complexity Low_complexity 4 51 0 5 1762 2277 71 118 3 chrX 154317704 154318042 -12332254 - Lx3_Mus LINE L1 0 7009 6633 5 1762 243 274 196 0 chrX 154318171 154318273 -12332023 - L1MDa LINE L1 -6236 397 276 5 1762 667 279 211 43 chrX 154318326 154318651 -12331645 + MTD LTR MaLR 20 419 0 5 1762 284 326 29 57 chrX 154319312 154319452 -12330844 - Charlie20a DNA Charlie 0 807 672 5 1762 448 311 86 5 chrX 154319499 154319696 -12330600 - Charlie20a DNA Charlie -266 541 329 5 1762 531 261 127 46 chrX 154319827 154320000 -12330296 + B3A SINE B2 1 187 -11 5 1762 1232 169 4 34 chrX 154320100 154320333 -12329963 + URR1A DNA MER1_type 1 226 0 5 1762 298 281 174 22 chrX 154320387 154320525 -12329771 - Charlie20a DNA Charlie -648 159 1 5 1762 224 170 21 0 chrX 154321023 154321070 -12329226 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 5 1762 205 304 222 22 chrX 154321086 154321271 -12329025 + MIR SINE MIR 41 262 0 5 1762 1812 305 53 57 chrX 154321461 154322199 -12328097 + Lx5 LINE L1 6298 7032 -18 5 1762 374 252 47 0 chrX 154322257 154322364 -12327932 + MIR SINE MIR 112 223 -39 5 1762 826 109 36 0 chrX 154322800 154322937 -12327359 - B1_Mus1 SINE Alu -6 142 1 5 1762 422 208 22 94 chrX 154322824 154322962 -12327334 - MT2B LTR ERVL -337 264 137 5 1762 624 241 235 25 chrX 154324677 154324915 -12325381 - B4A SINE B4 -4 288 1 5 1762 766 318 10 71 chrX 154325413 154325496 -12324800 - B4A SINE B4 0 292 220 5 1762 201 39 0 0 chrX 154325496 154325522 -12324774 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 5 1762 817 269 5 0 chrX 154325522 154325723 -12324573 - B3 SINE B2 -14 202 1 5 1762 766 318 10 71 chrX 154325723 154325949 -12324347 - B4A SINE B4 -73 219 2 5 1762 235 240 268 16 chrX 154329031 154329158 -12321138 - MIR SINE MIR -64 198 40 5 1762 245 211 17 17 chrX 154330175 154330233 -12320063 + MTD LTR MaLR 1 58 -361 5 1762 574 246 0 38 chrX 154330257 154330388 -12319908 - B1_Mur3 SINE Alu -21 128 3 5 1762 225 0 0 0 chrX 154330697 154330722 -12319574 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 5 1762 1159 247 73 62 chrX 154330790 154331144 -12319152 + MTD LTR MaLR 50 407 -12 5 1762 186 133 0 0 chrX 154331247 154331277 -12319019 + (CTA)n Simple_repeat Simple_repeat 3 32 0 5 1762 999 116 7 0 chrX 154331300 154331446 -12318850 - B1_Mus1 SINE Alu 0 148 2 5 1762 8819 89 18 6 chrX 154332064 154334072 -12316224 + Lx3A LINE L1 4857 6886 -95 5 1762 585 305 18 6 chrX 154334302 154334470 -12315826 - B3A SINE B2 -4 194 25 5 1762 27 49 0 0 chrX 154335448 154335489 -12314807 + AT_rich Low_complexity Low_complexity 1 41 0 5 1762 30 27 0 0 chrX 154336796 154336833 -12313463 + AT_rich Low_complexity Low_complexity 1 37 0 5 1762 414 0 0 0 chrX 154337436 154337482 -12312814 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1762 368 308 84 84 chrX 154337602 154337815 -12312481 - MER20 DNA MER1_type 0 219 7 5 1762 283 386 80 18 chrX 154338532 154338756 -12311540 - MIRb SINE MIR -11 257 20 5 1762 21 0 0 0 chrX 154339247 154339268 -12311028 + AT_rich Low_complexity Low_complexity 1 21 0 5 1762 329 284 142 12 chrX 154339943 154340123 -12310173 - MIR SINE MIR -31 231 37 5 1762 29 0 0 0 chrX 154340286 154340315 -12309981 + AT_rich Low_complexity Low_complexity 1 29 0 5 1762 4111 61 11 9 chrX 154340315 154340877 -12309419 - Lx3_Mus LINE L1 0 7009 6447 5 1762 32 43 0 0 chrX 154341035 154341081 -12309215 + AT_rich Low_complexity Low_complexity 1 46 0 5 1762 309 282 105 47 chrX 154341085 154341275 -12309021 + MIR SINE MIR 18 218 -44 5 1762 1556 251 17 22 chrX 154341525 154341887 -12308409 + MTEa LTR MaLR 18 377 -2 5 1762 257 305 33 13 chrX 154342040 154342178 -12308118 - PB1D10 SINE Alu 0 149 2 5 1762 212 179 26 0 chrX 154343611 154343650 -12306646 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1762 3325 35 2 0 chrX 154345046 154345441 -12304855 + MTA_Mm LTR MaLR 1 396 0 5 1762 23 0 0 0 chrX 154349449 154349472 -12300824 + AT_rich Low_complexity Low_complexity 1 23 0 5 1762 313 44 0 0 chrX 154350913 154350958 -12299338 + Lx3A LINE L1 6935 6979 -2 5 1762 282 116 0 0 chrX 154351233 154351276 -12299020 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 1762 351 167 0 0 chrX 154352158 154352224 -12298072 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 1762 23 0 0 0 chrX 154354736 154354759 -12295537 + AT_rich Low_complexity Low_complexity 1 23 0 5 1762 28 29 0 0 chrX 154355903 154355938 -12294358 + AT_rich Low_complexity Low_complexity 1 35 0 5 1762 22 56 0 0 chrX 154358698 154358734 -12291562 + AT_rich Low_complexity Low_complexity 1 36 0 5 1762 272 138 0 15 chrX 154359106 154359172 -12291124 + A-rich Low_complexity Low_complexity 2 66 0 5 1762 43 20 0 0 chrX 154359614 154359664 -12290632 + AT_rich Low_complexity Low_complexity 1 50 0 5 1762 243 336 26 70 chrX 154359672 154359787 -12290509 - PB1D10 SINE Alu -7 110 1 5 1762 195 396 54 20 chrX 154361787 154361934 -12288362 - MIRb SINE MIR -81 187 36 5 1762 358 315 35 101 chrX 154362300 154362498 -12287798 - MER5A DNA MER1_type -3 186 2 5 1762 24 0 0 0 chrX 154363451 154363475 -12286821 + AT_rich Low_complexity Low_complexity 1 24 0 5 1762 23 54 0 0 chrX 154366181 154366218 -12284078 + AT_rich Low_complexity Low_complexity 1 37 0 5 1762 536 200 7 0 chrX 154369174 154369319 -12280977 + GA-rich Low_complexity Low_complexity 1 146 0 5 1762 766 48 0 0 chrX 154371929 154372034 -12278262 - L1_Mus2 LINE L1 -1 6565 6461 6 1762 201 26 51 26 chrX 154372296 154372335 -12277961 + (TA)n Simple_repeat Simple_repeat 1 40 0 6 1762 210 137 19 38 chrX 154372972 154373025 -12277271 + (CAAA)n Simple_repeat Simple_repeat 4 55 0 6 1762 23 0 0 0 chrX 154373493 154373516 -12276780 + AT_rich Low_complexity Low_complexity 1 23 0 6 1762 22 0 0 0 chrX 154373614 154373636 -12276660 + AT_rich Low_complexity Low_complexity 1 22 0 6 1762 198 0 0 0 chrX 154373883 154373905 -12276391 + (TG)n Simple_repeat Simple_repeat 2 23 0 6 1762 242 232 56 42 chrX 154373905 154373966 -12276330 - B4A SINE B4 -10 282 220 6 1762 1579 197 106 5 chrX 154373978 154374346 -12275950 + Lx2B LINE L1 6583 6987 -13 6 1762 357 24 0 0 chrX 154374365 154374407 -12275889 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 6 1762 449 242 71 24 chrX 154374412 154374539 -12275757 - RSINE1 SINE B4 -10 155 23 6 1762 444 324 7 66 chrX 154374607 154374759 -12275537 - RSINE1 SINE B4 -18 147 5 6 1762 501 282 118 6 chrX 154374763 154374941 -12275355 - B4A SINE B4 -63 229 32 6 1762 210 171 0 0 chrX 154375389 154375430 -12274866 + A-rich Low_complexity Low_complexity 1 41 0 6 1762 340 303 11 22 chrX 154376716 154376807 -12273489 - MER5A DNA MER1_type -98 91 2 6 1762 4371 91 19 34 chrX 154377028 154377696 -12272600 + Lx3B LINE L1 6313 6970 -3 6 1762 1383 84 16 10 chrX 154379041 154379234 -12271062 + B2_Mm2 SINE B2 2 195 0 6 1762 1077 52 0 0 chrX 154379448 154379584 -12270712 + (TCCA)n Simple_repeat Simple_repeat 2 137 0 6 1762 188 238 0 0 chrX 154379597 154379639 -12270657 - MIR SINE MIR -26 236 195 6 1762 234 282 27 53 chrX 154380919 154380994 -12269302 + MTE2b LTR MaLR 4 76 -303 6 1762 749 310 32 78 chrX 154381017 154381325 -12268971 + MTE2b LTR MaLR 58 351 -28 6 1762 354 290 12 58 chrX 154381928 154382100 -12268196 - Tigger7 DNA MER2_type -25 2466 2303 6 1762 485 335 28 28 chrX 154382092 154382307 -12267989 - Tigger7 DNA MER2_type -2047 444 230 6 1762 347 332 107 34 chrX 154382536 154382742 -12267554 + B4 SINE B4 66 286 -6 6 1762 335 234 245 39 chrX 154383413 154383579 -12266717 - B3A SINE B2 -10 185 1 6 1762 804 180 16 33 chrX 154384327 154384511 -12265785 + Lx5 LINE L1 6870 7050 0 6 1762 202 146 0 24 chrX 154384511 154384553 -12265743 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 6 1762 1354 220 28 31 chrX 154385122 154385446 -12264850 + MTE2a LTR MaLR 3 325 -54 6 1762 228 333 21 32 chrX 154385403 154385496 -12264800 - PB1D7 SINE Alu -28 92 1 6 1762 245 167 0 0 chrX 154386151 154386187 -12264109 + tRNA-Glu-GAG_ tRNA tRNA 1 36 -39 6 1762 576 77 0 0 chrX 154386640 154386718 -12263578 + (GAAAA)n Simple_repeat Simple_repeat 2 79 0 6 1762 525 94 0 0 chrX 154387199 154387284 -12263012 + (GA)n Simple_repeat Simple_repeat 2 86 0 6 1762 488 271 93 0 chrX 154387308 154387426 -12262870 - RSINE1 SINE B4 -30 135 7 6 1762 30 59 0 0 chrX 154388388 154388439 -12261857 + AT_rich Low_complexity Low_complexity 1 51 0 6 1762 870 343 86 31 chrX 154388569 154388987 -12261309 - MLT1E1A LTR MaLR -25 655 215 6 1762 1070 373 90 37 chrX 154389696 154390350 -12259946 + LTR41B LTR ERVL 1 689 -69 6 1762 201 269 170 70 chrX 154390607 154390707 -12259589 - MIRc SINE MIR -148 120 11 6 1762 22 0 0 0 chrX 154390916 154390938 -12259358 + AT_rich Low_complexity Low_complexity 1 22 0 6 1762 21 0 0 0 chrX 154390988 154391009 -12259287 + AT_rich Low_complexity Low_complexity 1 21 0 6 1762 700 207 54 94 chrX 154391069 154391293 -12259003 - B3 SINE B2 0 216 2 6 1762 441 0 0 0 chrX 154391491 154391540 -12258756 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1762 528 16 0 0 chrX 154391540 154391600 -12258696 + (GA)n Simple_repeat Simple_repeat 2 62 0 6 1762 192 91 0 0 chrX 154391987 154392005 -12258291 + (CAA)n Simple_repeat Simple_repeat 2 19 0 6 1762 234 0 0 0 chrX 154392005 154392031 -12258265 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 6 1762 192 91 0 0 chrX 154392031 154392045 -12258251 + (CAA)n Simple_repeat Simple_repeat 2 15 0 6 1762 236 63 0 89 chrX 154392283 154392353 -12257943 - L1_Mus3 LINE L1 0 6638 6574 6 1762 1184 97 6 11 chrX 154392543 154392721 -12257575 + B2_Mm2 SINE B2 5 181 -14 6 1762 294 174 9 0 chrX 154392787 154392851 -12257445 + B2_Mm2 SINE B2 47 114 -102 6 1762 261 0 0 0 chrX 154392871 154392900 -12257396 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 6 1762 1299 43 0 0 chrX 154392908 154393072 -12257224 + B2_Mm2 SINE B2 1 164 -31 6 1762 456 51 0 0 chrX 154393072 154393131 -12257165 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 6 1762 452 18 0 17 chrX 154393203 154393261 -12257035 + (TC)n Simple_repeat Simple_repeat 2 58 0 6 1762 444 248 80 94 chrX 154393262 154393400 -12256896 - B1_Mur1 SINE Alu -13 136 1 6 1762 180 0 0 0 chrX 154393418 154393438 -12256858 + (T)n Simple_repeat Simple_repeat 1 20 0 6 1762 1216 34 0 0 chrX 154393438 154393585 -12256711 - B1_Mm SINE Alu 0 147 1 6 1762 40 87 0 0 chrX 154394293 154394396 -12255900 + AT_rich Low_complexity Low_complexity 1 103 0 6 1762 327 202 0 45 chrX 154394521 154394609 -12255687 + Lx7 LINE L1 7605 7688 -8 6 1762 7473 1 0 0 chrX 154394604 154395433 -12254863 - L1Md_A LINE L1 0 6582 5754 6 1762 24 0 0 0 chrX 154395443 154395467 -12254829 + AT_rich Low_complexity Low_complexity 1 24 0 6 1762 23 0 0 0 chrX 154395544 154395567 -12254729 + AT_rich Low_complexity Low_complexity 1 23 0 6 1762 27 49 0 0 chrX 154396419 154396460 -12253836 + AT_rich Low_complexity Low_complexity 1 41 0 6 1762 1304 126 13 57 chrX 154396799 154397027 -12253269 - URR1A DNA MER1_type -1 225 8 6 1762 526 327 31 25 chrX 154398186 154398349 -12251947 + RSINE1 SINE B4 2 165 0 6 1762 22 56 0 0 chrX 154398446 154398482 -12251814 + AT_rich Low_complexity Low_complexity 1 36 0 6 1762 213 121 0 0 chrX 154398909 154398942 -12251354 + (GAA)n Simple_repeat Simple_repeat 1 33 0 6 1762 338 113 0 0 chrX 154399487 154399540 -12250756 - L1_Mur2 LINE L1 -979 4898 4846 6 1762 628 113 47 0 chrX 154399530 154399636 -12250660 - L1_Mur2 LINE L1 -1360 4517 4407 6 1762 758 120 0 0 chrX 154399663 154399780 -12250516 - L1_Mur2 LINE L1 -1968 3909 3793 6 1762 329 100 0 0 chrX 154399775 154399825 -12250471 + L1_Mur2 LINE L1 5058 5107 -770 6 1762 25 99 0 0 chrX 154400206 154400287 -12250009 + AT_rich Low_complexity Low_complexity 1 81 0 6 1762 245 151 19 0 chrX 154400457 154400510 -12249786 + (TATG)n Simple_repeat Simple_repeat 3 56 0 6 1762 356 264 168 0 chrX 154400533 154400700 -12249596 + L1MC5 LINE L1 6638 6832 -1129 6 1762 642 282 59 142 chrX 154401014 154401353 -12248943 + MTE2a LTR MaLR 1 311 -68 6 1762 24 77 0 0 chrX 154401487 154401539 -12248757 + AT_rich Low_complexity Low_complexity 1 52 0 6 1762 234 0 0 0 chrX 154401860 154401886 -12248410 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 6 1762 4444 192 49 17 chrX 154401886 154402749 -12247547 - Lx5 LINE L1 -18 7032 6143 6 1763 30 59 0 0 chrX 154403531 154403582 -12246714 + AT_rich Low_complexity Low_complexity 1 51 0 6 1763 21 0 0 0 chrX 154403747 154403768 -12246528 + AT_rich Low_complexity Low_complexity 1 21 0 6 1763 1119 75 0 0 chrX 154405137 154405284 -12245012 + B1_Mus1 SINE Alu 2 148 0 6 1763 650 124 108 0 chrX 154405487 154405616 -12244680 + L1_Mus3 LINE L1 6491 6633 -5 6 1763 357 174 11 11 chrX 154406503 154406590 -12243706 - Lx9 LINE L1 -26 7618 7532 6 1763 3573 226 137 15 chrX 154406604 154407606 -12242690 - Lx9 LINE L1 -211 7433 6310 6 1763 354 386 33 33 chrX 154408068 154408405 -12241891 - Lx8 LINE L1 -32 7441 7105 6 1763 187 280 0 20 chrX 154408866 154408917 -12241379 + MIRb SINE MIR 146 195 -73 6 1763 234 265 0 117 chrX 154408884 154408995 -12241301 + MIRc SINE MIR 170 267 -1 6 1763 3551 74 10 40 chrX 154409337 154409858 -12240438 - L1_Mus2 LINE L1 0 6566 6062 6 1763 3732 142 53 33 chrX 154409882 154410876 -12239420 + L1_Mus2 LINE L1 5587 6629 -7 6 1763 264 230 29 83 chrX 154410892 154411066 -12239230 + L1M3 LINE L1 5213 5377 -803 6 1763 765 44 237 0 chrX 154411223 154411337 -12238959 + B1_Mm SINE Alu 1 141 -6 6 1763 216 0 0 0 chrX 154411347 154411371 -12238925 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1763 1138 108 24 47 chrX 154413059 154413272 -12237024 + L1_Mus3 LINE L1 6431 6638 0 6 1763 659 355 100 10 chrX 154413687 154413986 -12236310 + MLT1I LTR MaLR 86 411 0 6 1763 4155 40 0 0 chrX 154414245 154414741 -12235555 - L1Md_F2 LINE L1 -14 6568 6073 6 1763 712 43 0 0 chrX 154414750 154414842 -12235454 + B1_Mus2 SINE Alu 48 139 -8 6 1763 3722 174 92 77 chrX 154414944 154415832 -12234464 + RMER19B LTR ERVK 1 902 0 6 1763 6855 208 38 16 chrX 154416827 154418239 -12232057 + Lx5 LINE L1 5587 7029 -21 6 1763 324 243 108 0 chrX 154418281 154418429 -12231867 + L1_Mur3 LINE L1 5284 5447 -433 6 1763 1269 157 145 13 chrX 154419769 154420073 -12230223 + Lx5 LINE L1 6704 7047 -3 6 1763 2214 27 0 0 chrX 154420198 154420454 -12229842 - L1Md_T LINE L1 -370 6212 5957 6 1763 2961 31 0 0 chrX 154420454 154420807 -12229489 + L1Md_T LINE L1 6229 6581 -1 6 1763 679 191 81 0 chrX 154421669 154421805 -12228491 - B1_Mur2 SINE Alu -2 147 1 6 1763 24 96 0 0 chrX 154422537 154422610 -12227686 + AT_rich Low_complexity Low_complexity 1 73 0 6 1763 211 200 0 0 chrX 154424066 154424101 -12226195 + (CATA)n Simple_repeat Simple_repeat 2 36 0 6 1763 1001 130 37 0 chrX 154424486 154424648 -12225648 - URR1A DNA MER1_type 0 226 59 6 1763 4428 10 0 0 chrX 154425218 154425711 -12224585 + MT2_Mm LTR ERVL 1 493 0 6 1763 926 203 67 38 chrX 154427742 154427952 -12222344 + B3 SINE B2 1 216 0 6 1763 29 84 0 0 chrX 154428291 154428362 -12221934 + AT_rich Low_complexity Low_complexity 1 71 0 6 1763 291 290 20 68 chrX 154428573 154428721 -12221575 - MIR SINE MIR -94 168 28 6 1763 983 97 7 7 chrX 154428915 154429061 -12221235 - B1_Mm SINE Alu 0 147 2 7 1763 193 347 47 27 chrX 154429191 154429339 -12220957 - L2a LINE L2 -73 3353 3203 7 1763 1995 121 59 3 chrX 154429442 154429782 -12220514 + RLTR15 LTR ERVK 1 359 0 7 1763 1173 237 0 58 chrX 154432109 154432404 -12217892 - Lx6 LINE L1 -26 7434 7157 7 1763 1964 206 13 89 chrX 154432404 154432852 -12217444 + MTC LTR MaLR 8 421 0 7 1763 2723 158 111 8 chrX 154433688 154434203 -12216093 + RMER1B Other Other 496 1063 -3 7 1763 1288 91 0 31 chrX 154436276 154436469 -12213827 + L1_Mus1 LINE L1 6380 6566 -1 7 1763 288 167 0 43 chrX 154437126 154437220 -12213076 + Lx4B LINE L1 6965 7054 -4 7 1763 213 132 26 0 chrX 154437367 154437405 -12212891 + A-rich Low_complexity Low_complexity 3 41 0 7 1763 279 0 0 0 chrX 154437954 154437985 -12212311 + (TA)n Simple_repeat Simple_repeat 2 32 0 7 1763 346 350 106 0 chrX 154437985 154438145 -12212151 - MIRb SINE MIR -20 248 72 7 1763 901 78 13 25 chrX 154438604 154438761 -12211535 - Lx2 LINE L1 -6 6991 6837 7 1763 1452 268 104 21 chrX 154439060 154440008 -12210288 + L1MB3 LINE L1 5083 6100 -83 7 1763 256 204 0 0 chrX 154440040 154440084 -12210212 + ID4 SINE ID 1 44 -39 7 1763 31 44 0 0 chrX 154440118 154440163 -12210133 + AT_rich Low_complexity Low_complexity 1 45 0 7 1763 1336 67 44 0 chrX 154440268 154440448 -12209848 + B2_Mm2 SINE B2 1 188 -7 7 1763 1161 267 57 30 chrX 154440470 154440771 -12209525 - MTE2a LTR MaLR -13 366 58 7 1763 3172 40 7 7 chrX 154440835 154441240 -12209056 - L1Md_F3 LINE L1 -2 6582 6178 7 1763 321 238 28 56 chrX 154441939 154442046 -12208250 - MER5A1 DNA MER1_type -6 160 57 7 1763 2338 242 0 8 chrX 154442723 154443203 -12207093 + Lx6 LINE L1 6938 7413 -47 7 1763 548 178 185 33 chrX 154443323 154443464 -12206832 + B2_Mm2 SINE B2 1 171 -22 7 1763 354 23 0 0 chrX 154443464 154443507 -12206789 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 7 1763 478 229 217 25 chrX 154443507 154443522 -12206774 + B2_Mm1t SINE B2 172 186 -7 7 1763 1776 139 77 3 chrX 154443569 154443927 -12206369 + Lx3C LINE L1 6447 6929 -129 7 1763 25 0 0 0 chrX 154444978 154445003 -12205293 + AT_rich Low_complexity Low_complexity 1 25 0 7 1763 438 36 0 0 chrX 154445484 154445540 -12204756 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 1763 184 212 0 29 chrX 154445662 154445730 -12204566 + GA-rich Low_complexity Low_complexity 3 68 0 7 1763 6041 123 49 7 chrX 154445898 154446872 -12203424 + Lx3B LINE L1 5956 6970 -3 7 1763 201 167 0 0 chrX 154446888 154446900 -12203396 + (TA)n Simple_repeat Simple_repeat 1 12 0 7 1763 315 0 0 0 chrX 154446900 154446935 -12203361 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1763 201 167 0 0 chrX 154446935 154446964 -12203332 + (TA)n Simple_repeat Simple_repeat 2 30 0 7 1763 467 200 0 143 chrX 154447153 154447293 -12203003 + PB1D9 SINE Alu 1 120 0 7 1763 603 229 38 14 chrX 154447365 154447578 -12202718 - Lx9 LINE L1 0 7644 7427 7 1763 1709 215 47 10 chrX 154447588 154447974 -12202322 + Lx9 LINE L1 6653 7052 -592 7 1763 925 262 83 4 chrX 154447992 154448256 -12202040 + Lx9 LINE L1 7144 7428 -216 7 1763 447 52 0 0 chrX 154448300 154448358 -12201938 + (TG)n Simple_repeat Simple_repeat 1 58 0 7 1763 5158 62 3 3 chrX 154448429 154449088 -12201208 - L1Md_F2 LINE L1 -19 6563 5905 7 1763 3930 62 0 17 chrX 154449088 154449617 -12200679 + L1_Mm LINE L1 3093 3612 -2271 7 1763 3128 73 2 0 chrX 154450714 154451125 -12199171 + L1_Mus1 LINE L1 6155 6566 -1 7 1763 42 20 0 0 chrX 154451371 154451420 -12198876 + AT_rich Low_complexity Low_complexity 1 49 0 7 1763 643 283 65 10 chrX 154451924 154452124 -12198172 + B3 SINE B2 5 215 -1 7 1763 11612 199 35 32 chrX 154452250 154452691 -12197605 + L1_Mur3 LINE L1 2346 2808 -3072 7 1763 1100 62 13 27 chrX 154452691 154452840 -12197456 + B1_Mus1 SINE Alu 2 148 0 7 1763 11612 199 35 32 chrX 154452840 154454758 -12195538 + L1_Mur3 LINE L1 2809 4724 -1156 7 1763 1248 20 7 0 chrX 154454758 154454904 -12195392 + B1_Mm SINE Alu 1 147 0 7 1763 11612 199 35 32 chrX 154454904 154455374 -12194922 + L1_Mur3 LINE L1 4725 5184 -696 7 1763 3185 253 115 35 chrX 154455382 154456385 -12193911 + Lx7 LINE L1 5876 6958 -738 7 1763 1681 83 0 0 chrX 154456415 154456644 -12193652 - Lx5 LINE L1 -1177 5873 5645 7 1763 5160 180 36 18 chrX 154456644 154457627 -12192669 + Lx5 LINE L1 6048 7047 -3 7 1763 931 123 0 94 chrX 154458605 154458775 -12191521 + B2_Mm2 SINE B2 1 154 -41 7 1763 198 0 0 0 chrX 154458776 154458798 -12191498 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 7 1763 1572 299 135 71 chrX 154459176 154460075 -12190221 + Lx8 LINE L1 6434 7389 -84 7 1763 633 278 7 0 chrX 154460683 154460827 -12189469 + RSINE1 SINE B4 3 147 -18 7 1763 306 0 0 0 chrX 154460831 154460865 -12189431 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 1763 1048 121 18 0 chrX 154461342 154461508 -12188788 - URR1A DNA MER1_type 0 226 58 7 1763 22 0 0 0 chrX 154462198 154462220 -12188076 + AT_rich Low_complexity Low_complexity 1 22 0 7 1763 4584 99 58 7 chrX 154462234 154462937 -12187359 - Lx3B LINE L1 -5 6968 6230 7 1763 968 261 60 4 chrX 154464366 154464616 -12185680 - Lx6 LINE L1 -4 7456 7193 7 1763 759 112 0 16 chrX 154464619 154464746 -12185550 + L1Md_F2 LINE L1 6446 6570 -12 7 1763 364 274 210 15 chrX 154466106 154466306 -12183990 - L1MC3 LINE L1 0 7785 7547 7 1763 636 283 101 20 chrX 154466333 154466629 -12183667 - L1MD3 LINE L1 -325 7670 7351 7 1763 1729 210 33 33 chrX 154466833 154467252 -12183044 + MTD LTR MaLR 1 419 0 7 1763 279 211 132 11 chrX 154467264 154467355 -12182941 + MER20B DNA MER1_type 566 667 -116 7 1763 472 348 26 0 chrX 154467343 154467458 -12182838 - PB1 SINE Alu -4 123 6 7 1763 231 177 60 12 chrX 154467528 154467694 -12182602 + (TA)n Simple_repeat Simple_repeat 2 175 0 7 1763 282 256 13 13 chrX 154468836 154468915 -12181381 - RSINE1 SINE B4 -85 80 2 7 1763 1314 139 51 0 chrX 154469569 154469784 -12180512 - URR1A DNA MER1_type 0 226 1 7 1763 462 18 0 0 chrX 154469903 154469958 -12180338 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1763 1229 34 0 0 chrX 154470206 154470353 -12179943 - B1_Mus2 SINE Alu 0 147 1 7 1763 23 33 0 0 chrX 154470556 154470586 -12179710 + AT_rich Low_complexity Low_complexity 1 30 0 7 1763 5490 144 34 21 chrX 154470622 154471560 -12178736 - Lx2 LINE L1 0 6997 6048 7 1763 1980 194 57 5 chrX 154472264 154472652 -12177644 + Lx7 LINE L1 7013 7420 -276 7 1763 198 0 0 0 chrX 154472715 154472737 -12177559 + (TG)n Simple_repeat Simple_repeat 1 22 0 7 1763 400 255 0 18 chrX 154472739 154472851 -12177445 + Lx7 LINE L1 7567 7676 -20 7 1763 25 0 0 0 chrX 154473124 154473149 -12177147 + AT_rich Low_complexity Low_complexity 1 25 0 7 1763 44 46 0 0 chrX 154473170 154473235 -12177061 + AT_rich Low_complexity Low_complexity 1 65 0 7 1763 24 53 0 0 chrX 154473331 154473369 -12176927 + AT_rich Low_complexity Low_complexity 1 38 0 7 1763 202 373 101 40 chrX 154473896 154474223 -12176073 - L2c LINE L2 0 3387 3041 7 1763 328 361 22 8 chrX 154474560 154474694 -12175602 - Charlie16a DNA MER1_type -6 336 201 7 1763 24 0 0 0 chrX 154476986 154477010 -12173286 + AT_rich Low_complexity Low_complexity 1 24 0 7 1763 816 275 4 26 chrX 154477996 154478224 -12172072 + ID_B1 SINE B4 1 223 -1 7 1763 417 39 0 0 chrX 154479126 154479177 -12171119 + (TG)n Simple_repeat Simple_repeat 1 51 0 7 1763 26 64 0 0 chrX 154481277 154481324 -12168972 + GC_rich Low_complexity Low_complexity 1 47 0 7 1763 876 157 34 24 chrX 154482629 154482813 -12167483 + B3 SINE B2 1 190 -5 7 1763 776 65 9 0 chrX 154483416 154483523 -12166773 + (TAGA)n Simple_repeat Simple_repeat 4 111 0 7 1763 189 0 0 0 chrX 154483713 154483734 -12166562 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 7 1763 467 234 22 0 chrX 154484840 154484943 -12165353 - PB1D7 SINE Alu -40 109 5 7 1763 384 138 0 0 chrX 154486709 154486774 -12163522 + (GGGA)n Simple_repeat Simple_repeat 1 65 0 7 1763 21 57 0 0 chrX 154487683 154487718 -12162578 + AT_rich Low_complexity Low_complexity 1 35 0 7 1763 1073 66 0 0 chrX 154487775 154487912 -12162384 - B1_Mm SINE Alu -10 137 1 7 1763 1171 261 105 22 chrX 154487919 154488365 -12161931 - Lx8 LINE L1 -3 7470 6988 7 1763 407 272 9 0 chrX 154488376 154488490 -12161806 - Lx8 LINE L1 -565 6908 6794 7 1763 358 219 119 33 chrX 154488488 154488639 -12161657 + L1MDa LINE L1 2424 2587 -4046 7 1763 464 179 10 59 chrX 154488631 154488732 -12161564 + Lx4A LINE L1 6908 7003 -55 7 1763 441 0 0 0 chrX 154488978 154489027 -12161269 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 7 1763 426 39 0 0 chrX 154489042 154489094 -12161202 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 1763 574 254 49 0 chrX 154489102 154489224 -12161072 - B1F SINE Alu -21 128 1 7 1763 21 0 0 0 chrX 154489389 154489410 -12160886 + AT_rich Low_complexity Low_complexity 1 21 0 7 1763 1423 239 50 23 chrX 154489436 154489779 -12160517 + MTE2a LTR MaLR 1 352 -27 7 1763 622 256 51 17 chrX 154489820 154489995 -12160301 - B3A SINE B2 -16 182 2 7 1763 305 321 29 29 chrX 154490841 154490871 -12159425 + L1MEg LINE L1 1850 1879 -4205 7 1763 1086 75 0 26 chrX 154490871 154491022 -12159274 + B1_Mm SINE Alu 1 147 0 7 1763 305 321 29 29 chrX 154491022 154491129 -12159167 + L1MEg LINE L1 1880 1986 -4098 7 1763 985 307 76 33 chrX 154491278 154491675 -12158621 + MTD LTR MaLR 6 419 0 7 1763 641 274 26 13 chrX 154492070 154492239 -12158057 - ID_B1 SINE B4 -46 246 76 7 1763 2007 214 158 74 chrX 154492384 154493085 -12157211 - Lx7 LINE L1 0 7696 6893 7 1763 1162 74 0 0 chrX 154493085 154493233 -12157063 - B1_Mus1 SINE Alu 0 148 1 7 1763 2007 212 161 87 chrX 154493233 154493356 -12156940 - Lx7 LINE L1 -804 6892 6770 7 1763 546 176 98 0 chrX 154493699 154493801 -12156495 + B3 SINE B2 1 112 -104 8 1763 7611 121 50 7 chrX 154493809 154495910 -12154386 + L1Md_F LINE L1 215 2408 -3475 8 1763 25222 69 5 2 chrX 154495909 154500000 -12150296 - L1Md_F2 LINE L1 -1 6581 2484 8 1763 626 98 0 11 chrX 154500001 154500094 -12150202 - L1_Mm LINE L1 -3401 2482 2391 1 1763 23557 104 39 5 chrX 154500090 154503363 -12146933 + L1_Mus1 LINE L1 371 3822 -2061 2 1763 3017 76 5 12 chrX 154503363 154503762 -12146534 - MTA_Mm LTR MaLR 0 396 1 3 1763 23557 118 50 5 chrX 154503762 154505224 -12145072 + L1_Mus1 LINE L1 3823 5287 -596 2 1763 7331 81 16 1 chrX 154505217 154506270 -12144026 + L1_Mus1 LINE L1 5501 6567 0 2 1763 474 259 0 25 chrX 154506275 154506394 -12143902 + B3 SINE B2 101 216 0 4 1763 315 367 115 28 chrX 154506604 154506786 -12143510 + L1MA7 LINE L1 715 912 -5741 5 1763 324 216 0 26 chrX 154506791 154506816 -12143480 + HAL1-3A_ME LINE L1 1954 1977 -881 6 1763 1118 238 85 19 chrX 154506816 154507086 -12143210 + B4A SINE B4 5 292 0 7 1763 324 216 0 26 chrX 154507086 154507136 -12143160 + HAL1-3A_ME LINE L1 1978 2026 -832 6 1763 321 145 0 0 chrX 154507143 154507205 -12143091 + (CA)n Simple_repeat Simple_repeat 2 63 0 8 1763 717 286 59 20 chrX 154507387 154507590 -12142706 + ORR1D2 LTR MaLR 130 340 -30 9 1763 258 209 52 52 chrX 154507604 154507700 -12142596 + L1MA7 LINE L1 1822 1917 -4736 5 1763 658 258 158 27 chrX 154508288 154508582 -12141714 + L1MA7 LINE L1 5366 5709 -1020 5 1763 354 23 0 0 chrX 154508582 154508625 -12141671 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1763 658 271 88 7 chrX 154508625 154508793 -12141503 + L1MA7 LINE L1 5710 5879 -850 5 1763 552 243 76 22 chrX 154508904 154509089 -12141207 + L1MA7 LINE L1 6379 6573 -304 5 1763 369 0 0 0 chrX 154509156 154509197 -12141099 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1763 26 64 0 0 chrX 154509252 154509299 -12140997 + AT_rich Low_complexity Low_complexity 1 47 0 1 1763 1353 210 87 34 chrX 154509304 154509659 -12140637 - ORR1D1 LTR MaLR 0 374 1 1 1763 189 0 0 0 chrX 154509661 154509682 -12140614 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 1763 328 26 0 0 chrX 154509682 154509720 -12140576 - HAL1-3A_ME LINE L1 -846 2012 1975 1 1763 477 141 0 0 chrX 154509724 154509809 -12140487 + (TA)n Simple_repeat Simple_repeat 2 86 0 1 1763 408 40 0 0 chrX 154509809 154509859 -12140437 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 1763 371 294 0 0 chrX 154509869 154509961 -12140335 - B3A SINE B2 -124 92 1 1 1763 338 366 126 19 chrX 154509961 154510163 -12140133 - B4A SINE B4 -65 227 4 1 1763 260 276 120 16 chrX 154510166 154510350 -12139946 + L1MA7 LINE L1 6631 6833 -44 5 1763 504 72 0 0 chrX 154510387 154510456 -12139840 + (GA)n Simple_repeat Simple_repeat 2 70 0 2 1763 217 337 11 11 chrX 154510456 154510549 -12139747 + GA-rich Low_complexity Low_complexity 3 95 0 2 1763 729 91 26 35 chrX 154510712 154510826 -12139470 - B2_Mm2 SINE B2 -82 113 1 2 1763 3196 179 14 31 chrX 154511259 154511899 -12138397 - L1_Mur3 LINE L1 -54 5826 5198 2 1763 1385 126 4 18 chrX 154511900 154512122 -12138174 + ORR1A4 LTR MaLR 1 219 -110 2 1763 3126 171 19 14 chrX 154512122 154512216 -12138080 - RLTR20A2 LTR ERVK -1 577 481 2 1763 666 25 0 0 chrX 154512216 154512296 -12138000 + (CA)n Simple_repeat Simple_repeat 2 81 0 2 1763 3126 171 19 14 chrX 154512296 154512775 -12137521 - RLTR20A2 LTR ERVK -98 480 2 2 1763 793 79 26 9 chrX 154512775 154512890 -12137406 + ORR1A4 LTR MaLR 213 329 0 2 1763 1492 123 58 22 chrX 154512890 154513165 -12137131 - L1_Mur3 LINE L1 -679 5201 4917 2 1763 10694 166 58 11 chrX 154513157 154514588 -12135708 - L1_Mur3 LINE L1 -1757 4123 2645 2 1763 207 0 0 0 chrX 154514588 154514611 -12135685 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1763 10694 166 58 11 chrX 154514611 154515151 -12135145 - L1_Mur3 LINE L1 -3236 2644 2067 2 1763 333 0 0 0 chrX 154515151 154515188 -12135108 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1763 10694 166 58 11 chrX 154515188 154515409 -12134887 - L1_Mur3 LINE L1 -3814 2066 1829 2 1763 1834 268 31 27 chrX 154515473 154516057 -12134239 - L1_Mur3 LINE L1 -7087 641 56 2 1763 448 265 58 46 chrX 154516855 154517029 -12133267 - L1ME2 LINE L1 -132 6032 5857 2 1763 23 0 0 0 chrX 154517946 154517969 -12132327 + AT_rich Low_complexity Low_complexity 1 23 0 3 1763 1977 195 8 24 chrX 154518126 154518797 -12131499 + L1VL4 LINE L1 242 832 -5503 3 1763 3830 143 12 7 chrX 154518804 154519402 -12130894 - RLTR17 LTR ERVK -91 601 1 3 1763 673 130 21 8 chrX 154519520 154519639 -12130657 + Lx2B LINE L1 6304 6425 -551 3 1763 562 341 101 69 chrX 154519640 154520106 -12130190 + MLT-int LTR MaLR 463 943 -792 3 1763 437 235 0 6 chrX 154520326 154520506 -12129790 + GA-rich Low_complexity Low_complexity 1 179 0 3 1763 183 129 0 0 chrX 154520508 154520539 -12129757 + (ATG)n Simple_repeat Simple_repeat 3 33 0 3 1763 344 384 146 14 chrX 154520577 154520796 -12129500 + MLT-int LTR MaLR 1242 1489 -246 3 1763 510 290 27 61 chrX 154520855 154521002 -12129294 + RSINE1 SINE B4 4 145 -20 3 1763 675 239 43 23 chrX 154521275 154521532 -12128764 + L1MC LINE L1 2688 2949 -3197 3 1763 239 273 35 43 chrX 154521677 154521792 -12128504 - Lx5 LINE L1 -7 7043 6930 3 1763 461 210 18 158 chrX 154522153 154522317 -12127979 - B1_Mm SINE Alu -1 146 6 4 1763 458 252 38 6 chrX 154522390 154522550 -12127746 + L1MC LINE L1 3403 3567 -2579 3 1763 1061 293 91 6 chrX 154522553 154522860 -12127436 + L1MD2 LINE L1 5361 5674 -685 4 1763 306 0 0 0 chrX 154522860 154522894 -12127402 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 1763 1061 293 91 6 chrX 154522894 154523070 -12127226 + L1MD2 LINE L1 5675 5885 -474 4 1763 344 331 113 0 chrX 154523163 154523305 -12126991 + L1MD2 LINE L1 6027 6184 -175 4 1763 493 339 76 6 chrX 154523446 154523618 -12126678 + B4A SINE B4 1 184 -108 4 1763 373 234 40 11 chrX 154523696 154523812 -12126484 + L1M3 LINE L1 3459 3599 -2544 4 1763 814 194 0 0 chrX 154523823 154523962 -12126334 + B1_Mur2 SINE Alu 11 149 0 4 1763 1192 264 64 33 chrX 154524000 154524517 -12125779 + L1M3 LINE L1 3628 4160 -1980 4 1763 7853 152 23 3 chrX 154524531 154526325 -12123971 - Lx5 LINE L1 -635 6415 4572 4 1763 641 292 46 0 chrX 154526322 154526541 -12123755 - L1MA4 LINE L1 -397 5903 5675 4 1763 190 348 49 89 chrX 154526694 154526817 -12123479 - L2c LINE L2 -16 3371 3254 4 1763 1003 95 7 20 chrX 154527390 154527540 -12122756 + B1_Mur4 SINE Alu 3 150 0 4 1763 1025 103 0 40 chrX 154527579 154527731 -12122565 + B1_Mur3 SINE Alu 2 147 -2 5 1763 1407 123 0 14 chrX 154528307 154528529 -12121767 - Lx2 LINE L1 -4 6993 6775 5 1763 4131 104 7 0 chrX 154528529 154529114 -12121182 - Lx2 LINE L1 -354 6643 6055 5 1763 3963 75 0 0 chrX 154529189 154529692 -12120604 - L1_Mus1 LINE L1 0 6567 6065 5 1763 27 29 0 0 chrX 154529700 154529734 -12120562 + AT_rich Low_complexity Low_complexity 1 34 0 5 1763 275 319 126 11 chrX 154529878 154530068 -12120228 - Kanga1b DNA Tc2 -560 219 8 5 1763 755 267 148 15 chrX 154531238 154531566 -12118730 - RMER20B LTR ERVK -8 508 146 5 1763 616 250 40 27 chrX 154531711 154531859 -12118437 - RMER20B LTR ERVK -477 150 1 5 1763 596 216 254 38 chrX 154531861 154532207 -12118089 + Lx7 LINE L1 7276 7696 0 5 1763 699 172 21 96 chrX 154532214 154532319 -12117977 + L1_Mur3 LINE L1 5285 5382 -498 5 1763 2891 71 0 13 chrX 154532319 154532716 -12117580 + L1Md_F2 LINE L1 6191 6582 0 5 1763 699 172 21 96 chrX 154532716 154532797 -12117499 + L1_Mur3 LINE L1 5383 5457 -423 5 220 4134 239 45 30 chrX 154532812 154533897 -12116399 + Lx7 LINE L1 6064 7164 -532 5 1764 227 178 0 0 chrX 154533897 154533942 -12116354 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1764 226 294 0 0 chrX 154534016 154534084 -12116212 - Lx7 LINE L1 -484 7212 7145 6 1764 21 0 0 0 chrX 154534302 154534323 -12115973 + AT_rich Low_complexity Low_complexity 1 21 0 6 1764 427 134 0 24 chrX 154534720 154534804 -12115492 + (TA)n Simple_repeat Simple_repeat 2 83 0 6 1764 211 400 0 0 chrX 154534825 154534885 -12115411 + BC1_Mm scRNA scRNA 16 75 -77 6 1764 225 94 0 0 chrX 154535684 154535716 -12114580 + (TA)n Simple_repeat Simple_repeat 2 33 0 6 1764 216 169 33 17 chrX 154535821 154535881 -12114415 + A-rich Low_complexity Low_complexity 2 62 0 6 1764 449 235 139 7 chrX 154536073 154536210 -12114086 - RMER5 LTR ERV1 -371 163 9 6 1764 380 348 9 26 chrX 154536242 154536357 -12113939 - PB1D7 SINE Alu -7 113 1 6 1764 306 0 0 0 chrX 154536395 154536429 -12113867 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 6 1764 8562 90 24 6 chrX 154536429 154537666 -12112630 - Lx3_Mus LINE L1 -22 6987 5728 7 1764 463 229 32 32 chrX 154537662 154537788 -12112508 + Lx7 LINE L1 7571 7696 0 5 1764 563 291 44 11 chrX 154537961 154538142 -12112154 - B3A SINE B2 -10 188 2 7 1764 1235 89 6 0 chrX 154538382 154538561 -12111735 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 7 1764 303 175 0 0 chrX 154538563 154538620 -12111676 + CT-rich Low_complexity Low_complexity 2 58 0 7 1764 21 36 0 0 chrX 154538798 154538826 -12111470 + AT_rich Low_complexity Low_complexity 1 28 0 7 1764 294 409 27 2 chrX 154539925 154540095 -12110201 + MER45A DNA Tip100 1 174 -4 7 1764 20630 132 78 121 chrX 154540398 154544677 -12105619 + L1_Mus4 LINE L1 609 4950 -933 7 1764 4387 67 53 3 chrX 154544677 154545279 -12105017 + L1_Mus2 LINE L1 5933 6564 -2 7 1764 20630 123 86 138 chrX 154545279 154545946 -12104350 + L1_Mus4 LINE L1 4951 5586 -297 7 1764 7635 58 11 5 chrX 154545946 154546934 -12103362 + L1Md_F3 LINE L1 5587 6580 -4 7 1764 20630 95 56 64 chrX 154546934 154547579 -12102717 + L1_Mus4 LINE L1 5587 5951 -685 7 1764 1631 173 0 108 chrX 154547584 154547954 -12102342 - RMER6C LTR ERVK -360 330 1 7 1764 38 51 0 0 chrX 154547963 154548022 -12102274 + AT_rich Low_complexity Low_complexity 1 59 0 8 1764 342 0 0 0 chrX 154548404 154548442 -12101854 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 1764 773 211 4 199 chrX 154548482 154548812 -12101484 - RLTR19 LTR ERVK -6 493 4 8 1764 180 328 51 72 chrX 154549316 154549454 -12100842 - L2 LINE L2 -575 2844 2710 8 1764 4415 142 40 3 chrX 154549591 154550310 -12099986 + L1_Mus1 LINE L1 409 1154 -5462 8 1764 35247 50 1 5 chrX 154550319 154556004 -12094292 + L1Md_T LINE L1 1 5589 -297 8 1764 8295 42 0 0 chrX 154556005 154557000 -12093296 + L1Md_T LINE L1 5591 6585 0 8 1764 24262 100 89 6 chrX 154557009 154561941 -12088355 + L1_Mus1 LINE L1 1174 6567 0 8 1764 310 376 79 12 chrX 154562174 154562427 -12087869 + L1MC4 LINE L1 7508 7777 -265 8 1764 222 425 14 0 chrX 154562428 154562501 -12087795 + FLAM_A SINE Alu 1 74 -221 8 1764 297 0 0 0 chrX 154562503 154562536 -12087760 + (TC)n Simple_repeat Simple_repeat 1 33 0 8 1764 216 0 0 0 chrX 154562536 154562559 -12087737 + (CA)n Simple_repeat Simple_repeat 1 24 0 8 1764 189 0 0 0 chrX 154562559 154562579 -12087717 + (TA)n Simple_repeat Simple_repeat 1 21 0 9 1764 229 226 0 0 chrX 154562603 154562656 -12087640 - Lx7 LINE L1 -875 6821 6769 9 1764 3491 78 2 0 chrX 154563071 154563532 -12086764 - L1Md_F2 LINE L1 -7 6575 6114 9 1764 2560 72 6 20 chrX 154563613 154563967 -12086329 - L1_Mus3 LINE L1 -3 6635 6287 9 1764 2635 152 42 16 chrX 154563963 154564416 -12085880 + Lx4A LINE L1 6593 7057 -1 9 1764 5291 192 71 10 chrX 154564954 154566232 -12084064 + Lx2B LINE L1 5674 7000 0 9 1764 240 203 27 13 chrX 154566272 154566347 -12083949 + (TA)n Simple_repeat Simple_repeat 2 77 0 9 1764 609 294 147 0 chrX 154566533 154566710 -12083586 + ID_B1 SINE B4 4 206 -18 9 1764 23 54 0 0 chrX 154567000 154567037 -12083259 + AT_rich Low_complexity Low_complexity 1 37 0 9 1764 216 0 0 0 chrX 154568310 154568334 -12081962 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 1764 2690 154 4 2 chrX 154568340 154568790 -12081506 - Lx2 LINE L1 -6 6991 6541 1 1764 288 309 28 46 chrX 154569573 154569790 -12080506 + L1_Mur3 LINE L1 1555 1767 -4113 1 1764 648 79 0 0 chrX 154570040 154570141 -12080155 + Lx2 LINE L1 6897 6997 0 1 1764 282 240 50 30 chrX 154570250 154570448 -12079848 - RMER17D LTR ERVK -444 445 244 1 1764 348 302 172 0 chrX 154570493 154570708 -12079588 + L1M2 LINE L1 2205 2456 -3684 1 1764 22 35 0 0 chrX 154570801 154570830 -12079466 + AT_rich Low_complexity Low_complexity 1 29 0 1 1764 4650 174 45 22 chrX 154571975 154572849 -12077447 + Lx5 LINE L1 6147 7040 -10 1 1764 432 283 75 6 chrX 154573791 154573951 -12076345 + RLTR42-int LTR ERVK 1228 1398 -4124 1 1764 547 215 90 7 chrX 154574271 154574416 -12075880 - Lx6 LINE L1 -62 7398 7242 1 1764 537 292 182 10 chrX 154574563 154574786 -12075510 - MLT1F2 LTR MaLR -3 651 331 1 1764 481 159 17 42 chrX 154574887 154575005 -12075291 - Lx5 LINE L1 0 7050 6936 1 1764 239 319 57 49 chrX 154575005 154575127 -12075169 - MamGypLTR1b LTR Gypsy -342 440 318 1 1764 1873 189 70 76 chrX 154575128 154575268 -12075028 - Lx5 LINE L1 -258 6800 6635 1 1764 1034 121 6 0 chrX 154575268 154575434 -12074862 + (TTTC)n Simple_repeat Simple_repeat 4 170 0 1 1764 2591 193 55 38 chrX 154575434 154576145 -12074151 - Lx5 LINE L1 -424 6634 5963 1 1764 1290 212 43 27 chrX 154576162 154576475 -12073821 + MT2A LTR ERVL 5 465 -136 1 1764 189 0 0 0 chrX 154576475 154576496 -12073800 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1 1764 386 316 117 68 chrX 154576496 154576603 -12073693 + MT2A LTR ERVL 466 600 -1 1 1764 427 333 84 35 chrX 154576603 154576800 -12073496 - MLT1F2 LTR MaLR -286 274 67 1 1764 23 0 0 0 chrX 154577121 154577144 -12073152 + AT_rich Low_complexity Low_complexity 1 23 0 1 1764 191 36 36 0 chrX 154577269 154577297 -12072999 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1 1764 46 33 0 0 chrX 154577399 154577459 -12072837 + AT_rich Low_complexity Low_complexity 1 60 0 1 1764 381 32 31 31 chrX 154577557 154577621 -12072675 + (GAAA)n Simple_repeat Simple_repeat 2 65 0 1 1764 6051 76 4 4 chrX 154577621 154578431 -12071865 + L1Md_F2 LINE L1 5763 6572 -10 1 1764 225 273 0 0 chrX 154578489 154578555 -12071741 + A-rich Low_complexity Low_complexity 1 66 0 1 1764 990 156 0 0 chrX 154578620 154578793 -12071503 + GA-rich Low_complexity Low_complexity 1 173 0 1 1764 192 77 0 0 chrX 154578796 154578822 -12071474 + (GA)n Simple_repeat Simple_repeat 2 27 0 1 1764 5212 48 2 3 chrX 154578839 154579481 -12070815 - L1Md_F2 LINE L1 -2 6580 5940 1 1764 36841 6 0 0 chrX 154580137 154585723 -12064573 + L1Md_A LINE L1 1 5586 -297 1 1764 9093 1 0 0 chrX 154585723 154586719 -12063577 + L1Md_A LINE L1 5587 6582 0 1 1764 198 91 0 0 chrX 154586736 154586769 -12063527 + (A)n Simple_repeat Simple_repeat 1 33 0 1 1764 1007 219 0 23 chrX 154586919 154587139 -12063157 - Lx7 LINE L1 -437 7259 7045 1 1764 1077 96 0 0 chrX 154587244 154587400 -12062896 + (TTTC)n Simple_repeat Simple_repeat 1 156 0 1 1764 607 152 25 0 chrX 154589330 154589448 -12060848 + Lx9 LINE L1 7517 7637 -7 1 1764 1214 82 16 16 chrX 154590166 154590353 -12059943 + L1_Mus3 LINE L1 6452 6638 0 1 1764 538 306 63 23 chrX 154590381 154590555 -12059741 + B3 SINE B2 30 210 -6 1 1764 310 202 303 25 chrX 154592931 154593053 -12057243 + MER5A1 DNA MER1_type 1 156 -10 1 1764 230 182 36 0 chrX 154593211 154593266 -12057030 + (CATA)n Simple_repeat Simple_repeat 4 60 0 1 1764 259 236 40 40 chrX 154593431 154593506 -12056790 - B3A SINE B2 -115 83 9 1 1764 323 292 14 0 chrX 154593439 154593511 -12056785 - ID SINE ID -150 74 2 1 1764 780 171 138 0 chrX 154593854 154594035 -12056261 - B3 SINE B2 -7 209 4 1 1764 258 324 75 17 chrX 154594254 154594427 -12055869 - MER20B DNA MER1_type -4 779 597 1 1764 273 261 92 42 chrX 154594621 154594741 -12055555 - MER20B DNA MER1_type -303 480 355 1 1764 818 278 27 24 chrX 154594774 154594786 -12055510 + L1Md_F2 LINE L1 5581 5591 -587 1 1764 2193 69 14 3 chrX 154594786 154595076 -12055220 - L1_Mus1 LINE L1 0 6567 6275 1 1764 5530 59 1 1 chrX 154595076 154595802 -12054494 + L1Md_F2 LINE L1 5587 6288 -294 1 1764 381 375 68 48 chrX 154595810 154596121 -12054175 - MER20B DNA MER1_type -438 345 29 1 1764 4576 100 8 9 chrX 154596280 154596293 -12054003 - MusHAL1 LINE L1 -1762 950 938 1 1764 2062 129 6 18 chrX 154596293 154596631 -12053665 - L1_Mus3 LINE L1 0 6638 6305 1 1764 4576 100 8 9 chrX 154596631 154597385 -12052911 - MusHAL1 LINE L1 -1775 937 185 1 1764 2276 117 81 64 chrX 154597385 154597852 -12052444 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1764 6436 43 2 17 chrX 154597854 154598695 -12051601 - IAPEz-int LTR ERVK -2 6479 5651 1 1764 2515 73 0 3 chrX 154598688 154599031 -12051265 - IAPEz-int LTR ERVK -4781 1700 1359 1 1764 3556 54 26 18 chrX 154599031 154599522 -12050774 - IAPEz-int LTR ERVK -5819 662 168 1 1764 239 321 0 0 chrX 154599522 154599575 -12050721 - RLTR27 LTR ERVK -34 275 223 1 1764 894 122 82 60 chrX 154599575 154599758 -12050538 - IAPEz-int LTR ERVK -6286 195 9 1 1764 2223 107 74 119 chrX 154599759 154600256 -12050040 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1764 3080 125 2 6 chrX 154600256 154600969 -12049327 - L1VL4 LINE L1 -2523 1294 578 1 1764 2686 164 88 32 chrX 154601058 154601287 -12049009 - L1_Mur3 LINE L1 -765 5115 4864 1 1764 366 23 0 0 chrX 154601287 154601330 -12048966 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1764 2686 164 88 32 chrX 154601330 154601757 -12048539 - L1_Mur3 LINE L1 -1017 4863 4423 1 1764 807 303 83 12 chrX 154601898 154602329 -12047967 - L1MDb LINE L1 -5289 1120 659 1 1764 878 267 19 28 chrX 154602421 154602637 -12047659 + MTD LTR MaLR 18 231 -188 1 1764 214 149 0 41 chrX 154602697 154602746 -12047550 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1 1764 483 351 23 18 chrX 154603128 154603299 -12046997 + MLT1H LTR MaLR 49 220 -329 1 1764 182 200 0 48 chrX 154605416 154605479 -12044817 + (CATATA)n Simple_repeat Simple_repeat 1 60 0 1 1764 1176 79 11 17 chrX 154605538 154605718 -12044578 - L1_Mus3 LINE L1 -8 6630 6452 1 1764 647 280 14 14 chrX 154605775 154606049 -12044247 - L1_Mur3 LINE L1 -602 5278 5036 1 1764 973 183 46 65 chrX 154606061 154606277 -12044019 + URR1A DNA MER1_type 9 220 -6 1 1764 3940 56 0 0 chrX 154606283 154606801 -12043495 + L1Md_F3 LINE L1 5069 5586 -297 1 1764 8043 43 3 2 chrX 154606801 154607783 -12042513 + L1Md_F3 LINE L1 5587 6569 -15 1 1764 3097 175 62 11 chrX 154607985 154608642 -12041654 - L1VL4 LINE L1 -622 5255 4565 1 1764 9607 126 62 11 chrX 154608638 154611604 -12038692 - L1VL4 LINE L1 -1996 3890 549 1 1764 789 285 8 0 chrX 154611643 154611899 -12038397 - L1M2 LINE L1 -538 5762 5505 1 1764 453 19 0 0 chrX 154611908 154611962 -12038334 + (TC)n Simple_repeat Simple_repeat 2 55 0 1 1764 234 0 0 0 chrX 154611962 154611987 -12038309 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1764 318 26 0 0 chrX 154613052 154613091 -12037205 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 1 1764 1557 188 40 197 chrX 154613091 154613338 -12036958 - RMER10A LTR ERVL 0 442 202 1 1764 354 23 0 0 chrX 154613338 154613381 -12036915 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 1 1764 1557 188 40 197 chrX 154613381 154613412 -12036884 - RMER10A LTR ERVL -241 201 201 1 1764 234 0 0 0 chrX 154613412 154613438 -12036858 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 1764 1557 188 40 197 chrX 154613438 154613677 -12036619 - RMER10A LTR ERVL -241 201 6 1 1764 220 92 76 15 chrX 154615626 154615692 -12034604 + T-rich Low_complexity Low_complexity 5 74 0 1 1764 286 298 102 48 chrX 154615913 154616100 -12034196 - L2 LINE L2 -968 2451 2255 1 1764 325 316 19 48 chrX 154616613 154616716 -12033580 - RSINE1 SINE B4 -64 101 2 1 1764 31 26 0 0 chrX 154616895 154616933 -12033363 + AT_rich Low_complexity Low_complexity 1 38 0 1 1764 180 0 0 0 chrX 154617402 154617422 -12032874 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 1 1764 434 255 209 51 chrX 154617571 154617786 -12032510 + B4A SINE B4 8 256 -36 1 1764 957 376 61 21 chrX 154618120 154618546 -12031750 - LTR16A LTR ERVL -8 443 1 1 1764 226 364 60 37 chrX 154618643 154618777 -12031519 + MLT1M LTR MaLR 82 218 -454 1 1764 513 0 0 0 chrX 154618893 154618950 -12031346 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 1764 249 307 58 123 chrX 154619173 154619344 -12030952 + MER5A DNA MER1_type 29 188 -1 1 1764 180 0 0 0 chrX 154619886 154619906 -12030390 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1764 759 164 7 27 chrX 154620509 154620658 -12029638 + B1_Mur4 SINE Alu 2 148 -2 1 1764 486 311 58 39 chrX 154620928 154621082 -12029214 - RSINE1 SINE B4 -8 157 1 1 1764 21 0 0 0 chrX 154621319 154621340 -12028956 + AT_rich Low_complexity Low_complexity 1 21 0 1 1764 525 277 111 99 chrX 154621389 154621742 -12028554 - ORR1E LTR MaLR 0 359 3 1 1764 35 24 0 0 chrX 154622455 154622497 -12027799 + AT_rich Low_complexity Low_complexity 1 42 0 1 1764 7122 55 5 0 chrX 154623126 154624019 -12026277 - L1Md_F3 LINE L1 -88 6496 5600 1 1764 22976 61 8 6 chrX 154624018 154625113 -12025183 - L1Md_F3 LINE L1 -1567 4316 3214 1 1764 2210 83 119 11 chrX 154625113 154625465 -12024831 - RLTR10 LTR ERVK 0 390 1 1 1764 22976 68 9 7 chrX 154625465 154627608 -12022688 - L1Md_F3 LINE L1 -2670 3213 1102 1 1764 2932 68 32 22 chrX 154627608 154628015 -12022281 + RLTR10A LTR ERVK 1 411 0 1 1764 5183 172 30 32 chrX 154628015 154628851 -12021445 - L1Md_F3 LINE L1 -5623 1101 238 1 1764 549 200 12 85 chrX 154628887 154628972 -12021324 - Lx7 LINE L1 0 7696 7623 1 1764 2146 82 139 12 chrX 154628972 154629318 -12020978 - RLTR10 LTR ERVK 0 390 1 1 1764 549 200 12 85 chrX 154629318 154629396 -12020900 - Lx7 LINE L1 -74 7622 7545 1 1764 2303 229 77 22 chrX 154629447 154630110 -12020186 - Lx7 LINE L1 -243 7453 6755 1 1764 4065 213 54 32 chrX 154630098 154630204 -12020092 + Lx7 LINE L1 5644 5738 -1958 1 1764 2452 41 0 0 chrX 154630204 154630499 -12019797 + L1Md_A LINE L1 6287 6581 -1 1 1764 4065 213 54 32 chrX 154630499 154630931 -12019365 + Lx7 LINE L1 5739 6169 -1527 1 1764 258 32 0 0 chrX 154630931 154630962 -12019334 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1764 4065 213 54 32 chrX 154630962 154631364 -12018932 + Lx7 LINE L1 6170 6606 -1090 1 1764 2057 128 171 3 chrX 154631366 154631735 -12018561 + BGLII_B LTR ERVK 1 431 -10 1 1764 841 215 0 0 chrX 154632056 154632230 -12018066 + Lx7 LINE L1 6590 6763 -697 1 1764 405 0 0 0 chrX 154634123 154634168 -12016128 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 1 1764 359 340 50 10 chrX 154635252 154635353 -12014943 + PB1D10 SINE Alu 8 112 -5 1 1764 2473 145 61 22 chrX 154635424 154635868 -12014428 + RMER6B LTR ERVK 1 461 0 1 1764 452 252 36 0 chrX 154635943 154636054 -12014242 + MLT1J1 LTR MaLR 16 130 -314 1 1764 1629 203 90 57 chrX 154636837 154637239 -12013057 - MTD LTR MaLR -4 415 1 1 1764 267 154 0 0 chrX 154637955 154638020 -12012276 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 1764 3292 162 87 19 chrX 154638026 154638669 -12011627 - RLTR17 LTR ERVK -5 687 1 1 1764 387 0 0 0 chrX 154638673 154638716 -12011580 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1764 1304 143 23 0 chrX 154638832 154639048 -12011248 + L1_Mur3 LINE L1 5604 5824 -56 1 1764 1146 220 154 21 chrX 154639030 154639355 -12010941 + Lx2B LINE L1 6623 6990 -10 1 1764 333 277 35 82 chrX 154639687 154639943 -12010353 - L1MA5 LINE L1 -359 5941 5698 2 1764 5309 5 10 0 chrX 154639955 154640556 -12009740 + L1_Mm LINE L1 4980 5586 -297 2 1764 9003 4 0 0 chrX 154640556 154641552 -12008744 + L1Md_A LINE L1 5587 6582 0 2 1764 697 255 38 93 chrX 154641573 154641917 -12008379 - L1MA5 LINE L1 -597 5700 5358 2 1764 723 81 0 0 chrX 154641917 154642016 -12008280 + (TCCC)n Simple_repeat Simple_repeat 4 102 0 2 1764 644 251 35 94 chrX 154642016 154642059 -12008237 - L1MA5 LINE L1 -955 5357 5326 2 1764 1269 280 63 63 chrX 154642568 154642852 -12007444 - L1MB2 LINE L1 -37 6134 5839 2 1764 2318 104 3 0 chrX 154642852 154643178 -12007118 + ORR1A2 LTR MaLR 1 327 0 2 1764 1269 280 63 63 chrX 154643178 154643505 -12006791 - L1MB2 LINE L1 -333 5838 5514 2 1764 318 26 0 0 chrX 154643505 154643544 -12006752 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 2 1764 553 228 81 0 chrX 154643547 154643670 -12006626 - B1_Mur2 SINE Alu -16 133 1 2 1764 1269 280 63 63 chrX 154643670 154643746 -12006550 - L1MB2 LINE L1 -658 5513 5442 2 1764 27 81 0 0 chrX 154643796 154643858 -12006438 + AT_rich Low_complexity Low_complexity 1 62 0 2 1764 229 254 27 40 chrX 154643952 154644026 -12006270 - L1M1 LINE L1 -370 5930 5858 2 1764 402 228 100 47 chrX 154644038 154644208 -12006088 - L1MB2 LINE L1 -726 5442 5264 2 1764 2087 73 11 0 chrX 154645631 154645905 -12004391 - L1_Mus1 LINE L1 0 6567 6291 2 1764 260 404 13 13 chrX 154646298 154646451 -12003845 + MIRb SINE MIR 98 250 -18 2 1764 204 125 0 0 chrX 154646558 154646590 -12003706 + (TATATG)n Simple_repeat Simple_repeat 1 32 0 2 1764 21 36 0 0 chrX 154646595 154646623 -12003673 + AT_rich Low_complexity Low_complexity 1 28 0 2 1764 343 341 54 27 chrX 154647627 154647650 -12002646 + MIR SINE MIR 12 33 -229 2 1764 180 77 0 0 chrX 154647650 154647676 -12002620 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 2 1764 408 310 50 25 chrX 154647676 154647836 -12002460 + MIRb SINE MIR 34 204 -64 2 1764 546 43 0 0 chrX 154647976 154648045 -12002251 + (CA)n Simple_repeat Simple_repeat 1 69 0 2 1764 309 379 27 60 chrX 154648047 154648232 -12002064 + ORR1E LTR MaLR 22 200 -159 2 1764 587 245 47 34 chrX 154648705 154648853 -12001443 - B1_Mur4 SINE Alu 0 150 1 2 1764 432 0 0 0 chrX 154649693 154649741 -12000555 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1764 1154 98 98 0 chrX 154649741 154649924 -12000372 + ORR1A2 LTR MaLR 104 304 -23 2 1764 555 16 0 0 chrX 154649980 154650044 -12000252 + (TC)n Simple_repeat Simple_repeat 1 64 0 2 1764 327 49 0 0 chrX 154650044 154650084 -12000212 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1764 1026 150 48 24 chrX 154650084 154650307 -11999989 - RMER6A LTR ERVK -438 318 1 2 1764 883 284 34 4 chrX 154650340 154650573 -11999723 - MLT2B2 LTR ERVL -270 245 6 2 1764 21 57 0 0 chrX 154651029 154651064 -11999232 + AT_rich Low_complexity Low_complexity 1 35 0 2 1764 306 73 0 0 chrX 154652251 154652292 -11998004 + (TA)n Simple_repeat Simple_repeat 1 41 0 2 1764 896 302 84 8 chrX 154652645 154652935 -11997361 - Charlie4a DNA MER1_type -4 504 192 2 1764 550 110 0 10 chrX 154652935 154653036 -11997260 + Lx LINE L1 6547 6646 -8 2 1764 896 302 84 8 chrX 154653036 154653065 -11997231 - Charlie4a DNA MER1_type -317 191 162 2 1764 288 0 0 0 chrX 154653065 154653097 -11997199 + (TAA)n Simple_repeat Simple_repeat 3 34 0 2 1764 896 302 84 8 chrX 154653097 154653170 -11997126 - Charlie4a DNA MER1_type -347 161 83 2 1764 537 152 0 92 chrX 154653290 154653399 -11996897 - B1_Mm SINE Alu -1 146 48 2 1764 424 219 37 28 chrX 154653371 154653479 -11996817 + MLT1B LTR MaLR 282 390 0 2 1764 260 362 30 15 chrX 154653647 154653779 -11996517 + MIRb SINE MIR 123 256 -12 2 1764 286 232 43 0 chrX 154653957 154654026 -11996270 - B1F SINE Alu -1 148 77 2 1764 378 320 32 8 chrX 154654020 154654146 -11996150 - RSINE1 SINE B4 -28 137 9 2 1764 379 261 9 35 chrX 154654325 154654440 -11995856 + L3 LINE CR1 4206 4317 -172 2 1764 902 278 70 0 chrX 154654512 154654771 -11995525 - L1M2 LINE L1 -547 5753 5477 2 1764 209 108 0 26 chrX 154655055 154655093 -11995203 + (TTAA)n Simple_repeat Simple_repeat 4 40 0 2 1764 686 316 50 10 chrX 154655175 154655373 -11994923 - B4A SINE B4 -4 288 83 2 1764 352 327 73 0 chrX 154655375 154655485 -11994811 - L1ME3B LINE L1 -153 6087 5970 2 1764 1642 164 47 14 chrX 154656002 154656299 -11993997 - Lx6 LINE L1 -870 6590 6284 2 1764 1098 241 36 10 chrX 154656304 154656610 -11993686 - Lx7 LINE L1 -1533 6163 5850 2 1764 2511 254 18 23 chrX 154656608 154657037 -11993259 + Lx6 LINE L1 6595 7015 -445 2 1764 495 0 0 0 chrX 154657037 154657092 -11993204 + (GA)n Simple_repeat Simple_repeat 2 56 0 2 1764 2511 254 18 23 chrX 154657092 154657263 -11993033 + Lx6 LINE L1 7016 7191 -269 2 1764 7651 83 0 0 chrX 154657271 154658619 -11991677 - L1_Mus1 LINE L1 -3 6564 5216 2 1764 31381 86 13 9 chrX 154658635 154663773 -11986523 + L1Md_F2 LINE L1 480 5641 -242 2 220 7240 68 1 3 chrX 154664287 154665221 -11985075 + L1Md_F2 LINE L1 5639 6570 -12 2 1765 5480 148 13 46 chrX 154665999 154667034 -11983262 + L1Md_F2 LINE L1 4587 5586 -297 2 1765 7642 64 4 7 chrX 154667034 154668031 -11982265 + L1Md_F2 LINE L1 5587 6580 -2 2 1765 4340 89 3 16 chrX 154668029 154668658 -11981638 + L1_Mus1 LINE L1 5947 6567 0 2 1765 309 337 50 0 chrX 154669460 154669561 -11980735 + MER5B DNA MER1_type 3 108 -70 2 1765 332 353 47 12 chrX 154669637 154669806 -11980490 + MIRb SINE MIR 36 210 -58 2 1765 2196 170 49 10 chrX 154669858 154670263 -11980033 + MTC LTR MaLR 1 421 0 2 1765 507 265 49 35 chrX 154670363 154670637 -11979659 + L1PB4 LINE L1 5752 6014 -283 2 1765 365 286 48 7 chrX 154670813 154670976 -11979320 + L1M1 LINE L1 5603 5777 -514 2 1765 29 47 0 0 chrX 154671255 154671298 -11978998 + AT_rich Low_complexity Low_complexity 1 43 0 2 1765 366 335 54 111 chrX 154671965 154672298 -11977998 - RLTR25A LTR ERVK -789 314 1 2 1765 258 287 10 21 chrX 154672332 154672428 -11977868 + L1M1 LINE L1 5789 5883 -420 2 1765 2253 101 24 29 chrX 154673017 154673395 -11976901 + Lx2B LINE L1 5824 6199 -801 2 1765 1884 136 70 133 chrX 154673467 154673924 -11976372 - RLTR23 LTR ERV1 -2 428 1 2 1765 477 243 33 73 chrX 154675085 154675236 -11975060 + MER5A DNA MER1_type 1 145 -44 2 1765 576 0 0 0 chrX 154675236 154675300 -11974996 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 1765 400 0 0 0 chrX 154676408 154676461 -11973835 + L1Md_T LINE L1 6530 6582 0 2 1765 216 48 0 67 chrX 154676786 154676831 -11973465 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 2 1765 363 44 0 0 chrX 154680311 154680356 -11969940 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 1765 956 299 42 57 chrX 154680528 154680861 -11969435 + MTEa LTR MaLR 48 375 -4 2 1765 793 264 58 70 chrX 154680866 154681123 -11969173 + MTEa-int LTR MaLR 2 255 -1325 2 1765 3513 178 76 0 chrX 154681134 154681792 -11968504 - RMER6D LTR ERVK -12 708 1 2 1765 733 204 14 7 chrX 154681792 154681928 -11968368 + MTEa-int LTR MaLR 248 384 -1196 2 1765 824 150 45 13 chrX 154681930 154682085 -11968211 + RMER6A LTR ERVK 1 160 -596 2 1765 1497 301 83 37 chrX 154682092 154682600 -11967696 + MTEa-int LTR MaLR 380 910 -670 2 1765 1683 259 133 23 chrX 154682786 154682819 -11967477 + MTEa-int LTR MaLR 868 905 -675 2 1765 540 111 0 0 chrX 154682819 154682900 -11967396 + (CA)n Simple_repeat Simple_repeat 2 82 0 2 1765 225 0 0 0 chrX 154682900 154682924 -11967372 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 1765 1683 259 133 23 chrX 154682924 154683371 -11966925 + MTEa-int LTR MaLR 906 1401 -179 2 1765 1214 161 165 40 chrX 154683409 154683706 -11966590 - MTC-int LTR MaLR -923 335 2 2 1765 518 105 13 0 chrX 154683705 154683781 -11966515 - MTC LTR MaLR 0 421 345 2 1765 1076 188 5 0 chrX 154683780 154683966 -11966330 - MTC LTR MaLR -234 187 1 2 1765 694 283 0 7 chrX 154684145 154684291 -11966005 - RSINE1 SINE B4 -19 146 2 2 1765 289 328 78 117 chrX 154684440 154684568 -11965728 + B4 SINE B4 52 174 -118 2 1765 188 192 27 0 chrX 154684690 154684763 -11965533 + (TCTCTG)n Simple_repeat Simple_repeat 4 78 0 2 1765 21 36 0 0 chrX 154684942 154684970 -11965326 + AT_rich Low_complexity Low_complexity 1 28 0 2 1765 20708 116 14 87 chrX 154685437 154690460 -11959836 + L1Md_F2 LINE L1 1335 5586 -297 2 1765 7037 90 12 3 chrX 154690460 154691443 -11958853 + L1Md_F2 LINE L1 5587 6578 -4 2 1765 1459 314 58 70 chrX 154693240 154693817 -11956479 - Tigger7 DNA MER2_type -6 699 116 2 1765 1146 76 0 0 chrX 154693817 154693961 -11956335 - B1_Mus2 SINE Alu -2 145 2 2 1765 1459 295 36 58 chrX 154693961 154694080 -11956216 - Tigger7 DNA MER2_type -2376 115 1 2 1765 4259 61 55 12 chrX 154694312 154694893 -11955403 - Lx3_Mus LINE L1 -8 7001 6396 2 1765 396 250 0 0 chrX 154694893 154694993 -11955303 - L1_Mur1 LINE L1 -6669 313 214 2 1765 512 266 58 7 chrX 154695031 154695186 -11955110 - MER5A1 DNA MER1_type -3 163 1 2 1765 4449 48 11 46 chrX 154695195 154695809 -11954487 - L1_Mus2 LINE L1 -1 6565 5973 2 1765 343 278 18 36 chrX 154696050 154696162 -11954134 - MIR SINE MIR -42 220 111 2 1765 805 254 45 0 chrX 154697205 154697382 -11952914 + B3 SINE B2 2 186 -30 2 1765 291 164 0 0 chrX 154697405 154697466 -11952830 + (TAGA)n Simple_repeat Simple_repeat 3 63 0 2 1765 228 311 16 0 chrX 154698102 154698163 -11952133 - MIRm SINE MIR -2 274 213 2 1765 21 36 0 0 chrX 154698311 154698339 -11951957 + AT_rich Low_complexity Low_complexity 1 28 0 2 1765 323 303 56 0 chrX 154698599 154698688 -11951608 + MER5A1 DNA MER1_type 25 118 -48 2 1765 686 18 62 0 chrX 154698788 154698900 -11951396 + (TA)n Simple_repeat Simple_repeat 1 119 0 2 1765 427 294 118 4 chrX 154698906 154699116 -11951180 - L1_Rod LINE L1 -673 5627 5335 2 1765 576 75 0 84 chrX 154699145 154699276 -11951020 + CT-rich Low_complexity Low_complexity 1 120 0 2 1765 962 161 6 11 chrX 154699276 154699452 -11950844 - B2_Mm2 SINE B2 -19 176 2 2 1765 745 185 7 29 chrX 154699476 154699615 -11950681 - B1_Mur3 SINE Alu -13 136 1 2 1765 629 301 32 8 chrX 154699628 154699879 -11950417 + L1MA4 LINE L1 5343 5599 -704 2 1765 437 268 106 0 chrX 154699879 154700002 -11950294 - B1_Mur1 SINE Alu -11 138 3 2 1765 851 297 29 133 chrX 154700004 154700381 -11949915 + MTE2b LTR MaLR 3 340 -39 2 1765 389 284 137 19 chrX 154700391 154700603 -11949693 + L1MA4 LINE L1 5652 5888 -412 2 1765 2339 137 37 5 chrX 154700604 154700978 -11949318 + MTC LTR MaLR 3 388 -33 2 1765 931 277 82 10 chrX 154701263 154701723 -11948573 + L1M4c LINE L1 2295 2773 -3343 2 1765 296 201 68 0 chrX 154701724 154701797 -11948499 + ORR1A4 LTR MaLR 246 364 -20 2 1765 263 273 154 5 chrX 154701833 154702021 -11948275 + L1M5 LINE L1 2362 2577 -3569 2 1765 1860 148 16 3 chrX 154702051 154702356 -11947940 - RLTR27 LTR ERVK 0 309 1 2 1765 440 304 18 9 chrX 154702535 154702648 -11947648 + PB1D9 SINE Alu 7 120 0 2 1765 245 279 57 9 chrX 154704598 154704703 -11945593 - MLT1J1 LTR MaLR -333 111 2 2 1765 519 282 56 0 chrX 154704845 154704987 -11945309 + MER5A DNA MER1_type 40 189 0 3 1765 900 285 70 3 chrX 154705039 154705366 -11944930 - Lx9 LINE L1 -1 7643 7295 3 1765 967 240 14 5 chrX 154705842 154706051 -11944245 + B3 SINE B2 2 212 -4 3 1765 3713 88 6 4 chrX 154706436 154706950 -11943346 - L1Md_F2 LINE L1 -2 6580 6066 3 1765 353 298 17 42 chrX 154706997 154707116 -11943180 + MER21B LTR ERV1 606 721 -142 3 1765 2080 305 111 27 chrX 154707168 154707915 -11942381 + MER21B LTR ERV1 2 811 -52 3 1765 2780 64 85 0 chrX 154708669 154709044 -11941252 - MTB LTR MaLR 0 407 1 3 1765 3999 118 27 113 chrX 154709044 154709182 -11941114 - MTB-int LTR MaLR 0 1098 978 3 1765 1184 111 33 0 chrX 154709182 154709362 -11940934 + B2_Mm2 SINE B2 2 187 -8 3 1765 3999 118 27 113 chrX 154709362 154710013 -11940283 - MTB-int LTR MaLR -121 977 377 3 1765 8392 32 1 0 chrX 154710015 154711003 -11939293 - L1Md_T LINE L1 0 6582 5594 3 1765 2162 127 52 0 chrX 154711015 154711378 -11938918 - MTB-int LTR MaLR -716 382 1 3 1765 3006 80 2 2 chrX 154711380 154711780 -11938516 - MTB LTR MaLR 0 400 1 3 1765 732 258 92 54 chrX 154713342 154713637 -11936659 + L1MC1 LINE L1 5978 6283 -50 3 1765 21 57 0 0 chrX 154713637 154713672 -11936624 + AT_rich Low_complexity Low_complexity 1 35 0 3 1765 187 253 24 107 chrX 154713975 154714016 -11936280 - MIRb SINE MIR -80 188 152 3 1765 1436 128 354 14 chrX 154714016 154714310 -11935986 - ORR1B1 LTR MaLR 0 394 1 3 1765 187 253 24 107 chrX 154714310 154714352 -11935944 - MIRb SINE MIR -117 151 112 3 1765 978 147 146 10 chrX 154714417 154714616 -11935680 - URR1A DNA MER1_type 0 226 1 3 1765 3022 146 39 137 chrX 154715063 154715825 -11934471 - RMER6C LTR ERVK 0 690 3 3 1765 2324 187 2 48 chrX 154716771 154717208 -11933088 + MTC LTR MaLR 3 407 -14 3 1765 471 306 76 7 chrX 154717292 154717437 -11932859 - LTR52 LTR ERVL -264 157 3 3 1765 195 254 164 0 chrX 154717550 154717605 -11932691 + L2 LINE L2 2404 2467 -952 3 1765 690 310 41 90 chrX 154717760 154718104 -11932192 - RLTR23 LTR ERV1 0 430 104 3 1765 292 211 127 197 chrX 154718123 154718265 -11932031 - RLTR23 LTR ERV1 -291 139 8 3 1765 9095 125 20 10 chrX 154718426 154719822 -11930474 - Lx2 LINE L1 -1 6996 5587 3 1765 467 48 0 0 chrX 154719820 154719883 -11930413 + MusHAL1 LINE L1 1238 1300 -1412 3 1765 3317 86 34 19 chrX 154719877 154720409 -11929887 + MusHAL1 LINE L1 1593 2132 -580 3 1765 1226 109 23 0 chrX 154720432 154720607 -11929689 + B2_Mm2 SINE B2 1 179 -16 3 1765 335 106 327 9 chrX 154720637 154720750 -11929546 + B2_Mm2 SINE B2 47 195 0 3 1765 1278 282 69 57 chrX 154721195 154721617 -11928679 + Lx8 LINE L1 6916 7345 -128 3 1765 810 31 0 0 chrX 154721617 154721714 -11928582 + (CATATA)n Simple_repeat Simple_repeat 5 101 0 3 1765 1278 282 69 57 chrX 154721714 154721840 -11928456 + Lx8 LINE L1 7346 7471 -2 3 1765 257 221 19 78 chrX 154721749 154721852 -11928444 + RMER1C Other Other 1234 1330 -12 3 1765 197 395 0 60 chrX 154722910 154723026 -11927270 + L2b LINE L2 3259 3367 -8 3 1765 819 119 0 0 chrX 154724619 154724745 -11925551 + (TA)n Simple_repeat Simple_repeat 2 127 0 3 1765 663 268 35 6 chrX 154725523 154725696 -11924600 - B3A SINE B2 -18 180 3 3 1765 26 0 0 0 chrX 154725732 154725758 -11924538 + AT_rich Low_complexity Low_complexity 1 26 0 3 1765 1058 314 39 7 chrX 154725946 154726356 -11923940 - Charlie2b DNA MER1_type -567 2215 1793 3 1765 285 336 174 31 chrX 154726370 154726594 -11923702 - Charlie2b DNA MER1_type -2465 317 62 3 1765 240 360 92 46 chrX 154726697 154726728 -11923568 - Lx8 LINE L1 -115 7358 7331 3 1765 369 0 0 0 chrX 154726728 154726769 -11923527 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1765 240 360 92 46 chrX 154726769 154726932 -11923364 - Lx8 LINE L1 -143 7330 7155 3 1765 374 242 108 8 chrX 154727161 154727290 -11923006 - MER34A LTR ERV1 -429 142 1 3 1765 467 298 30 15 chrX 154727509 154727642 -11922654 - MTEa LTR MaLR -197 182 48 3 1765 260 285 163 28 chrX 154727518 154727659 -11922637 - MLT2B4 LTR ERVL -355 201 42 3 1765 19712 66 5 0 chrX 154727856 154731158 -11919138 - L1Md_F2 LINE L1 -15 6567 3247 3 1765 7332 100 27 6 chrX 154732891 154733967 -11916329 - Lx LINE L1 -5 6649 5555 3 1765 3948 139 206 24 chrX 154733967 154734777 -11915519 + RMER17B LTR ERVK 1 958 0 3 1765 7085 153 30 20 chrX 154734777 154735755 -11914541 - Lx LINE L1 -329 5554 4585 3 1765 5153 145 4 29 chrX 154735749 154736241 -11914055 + L1_Mur2 LINE L1 3145 3637 -2240 3 1765 6990 48 8 3 chrX 154736241 154737118 -11913178 + L1Md_F2 LINE L1 5702 6582 0 3 1765 5153 145 4 29 chrX 154737118 154737554 -11912742 + L1_Mur2 LINE L1 3638 4050 -1827 3 1765 704 310 49 51 chrX 154738809 154739347 -11910949 + L1ME3 LINE L1 5615 6132 -41 3 1765 197 357 24 0 chrX 154739866 154739950 -11910346 + MIR SINE MIR 174 259 -3 3 1765 535 197 25 11 chrX 154740022 154740158 -11910138 - L1M2 LINE L1 -699 5604 5470 3 1765 765 302 19 29 chrX 154740204 154740567 -11909729 - Lx9 LINE L1 -220 7424 7035 3 1765 239 93 0 23 chrX 154741173 154741217 -11909079 + (GAAA)n Simple_repeat Simple_repeat 1 43 0 3 1765 410 114 0 0 chrX 154741649 154741728 -11908568 - L1Md_F2 LINE L1 0 6582 6504 3 1765 471 250 0 11 chrX 154741801 154741894 -11908402 + ID_B1 SINE B4 77 168 -56 3 1765 437 306 28 0 chrX 154741811 154741919 -11908377 + PB1D10 SINE Alu 5 115 -2 3 1765 210 71 0 0 chrX 154742360 154742388 -11907908 + (CATTA)n Simple_repeat Simple_repeat 1 28 0 3 1765 343 274 102 24 chrX 154742807 154742934 -11907362 + RLTR14 LTR ERV1 246 382 0 3 1765 387 0 0 0 chrX 154742961 154743004 -11907292 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1765 3205 168 41 57 chrX 154743082 154744015 -11906281 + RLTR13D1 LTR ERVK 1 855 0 3 1765 26 50 0 0 chrX 154744200 154744240 -11906056 + AT_rich Low_complexity Low_complexity 1 40 0 3 1765 1102 190 61 66 chrX 154744277 154744495 -11905801 - RMER17C LTR ERVK 0 410 180 3 1765 648 0 0 0 chrX 154744495 154744567 -11905729 + (GGAGA)n Simple_repeat Simple_repeat 1 72 0 3 1765 1102 190 61 66 chrX 154744567 154744759 -11905537 - RMER17C LTR ERVK -231 179 3 3 1765 563 150 60 0 chrX 154744760 154744860 -11905436 - RMER17C-int LTR ERVK 0 3238 3133 3 1765 543 233 57 72 chrX 154744863 154745301 -11904995 - RMER17C LTR ERVK -14 396 1 3 1765 22 70 0 0 chrX 154745527 154745570 -11904726 + AT_rich Low_complexity Low_complexity 1 43 0 3 1765 273 318 139 7 chrX 154746310 154746442 -11903854 + L2a LINE L2 3211 3414 -12 3 1765 966 319 90 55 chrX 154746479 154746933 -11903363 + LTR16C LTR ERVL 20 489 0 3 1765 795 307 60 32 chrX 154747240 154747556 -11902740 - MER58B DNA MER1_type -15 326 2 3 1765 595 269 52 80 chrX 154747598 154747925 -11902371 - MERVL_2A-int LTR ERVL -392 5369 5052 3 1765 3831 261 76 10 chrX 154747921 154749007 -11901289 - MERVL_2A-int LTR ERVL -1465 4296 3139 3 1765 399 342 77 42 chrX 154749008 154749295 -11901001 - MT2A LTR ERVL -235 298 2 3 1765 488 205 62 0 chrX 154749311 154749423 -11900873 + L1M2 LINE L1 4875 4993 -1150 3 1765 1380 204 52 15 chrX 154750160 154750428 -11899868 - Lx6 LINE L1 -69 7391 7114 3 1765 459 52 0 0 chrX 154750448 154750506 -11899790 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 1765 306 125 0 0 chrX 154750506 154750553 -11899743 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1765 960 244 48 70 chrX 154750565 154750896 -11899400 - ORR1D-int LTR MaLR -662 708 385 3 1765 293 173 0 0 chrX 154750896 154750948 -11899348 - ORR1D-int LTR MaLR -1305 204 153 3 1765 510 61 0 0 chrX 154750955 154751021 -11899275 + (TC)n Simple_repeat Simple_repeat 1 66 0 3 1765 444 227 164 29 chrX 154751028 154751187 -11899109 + ORR1C2 LTR MaLR 185 362 -12 3 1765 262 232 0 0 chrX 154751187 154751243 -11899053 - L1_Rod LINE L1 -2 5845 5790 3 1765 392 388 36 40 chrX 154751490 154751740 -11898556 - MIRb SINE MIR 0 268 20 3 1765 595 339 107 74 chrX 154751815 154752141 -11898155 + MER44B DNA MER2_type 22 354 -196 3 1765 4716 85 50 0 chrX 154752141 154752787 -11897509 + L1_Mus1 LINE L1 5889 6566 -1 3 1765 595 339 107 74 chrX 154752787 154752963 -11897333 + MER44B DNA MER2_type 355 541 -9 3 1765 401 287 129 23 chrX 154754350 154754700 -11895596 + L1M2 LINE L1 4982 5368 -775 3 1765 1159 80 12 0 chrX 154754716 154754878 -11895418 - B2_Mm2 SINE B2 -30 165 2 3 1765 2194 92 82 3 chrX 154754908 154755237 -11895059 + L1_Mus3 LINE L1 6280 6634 -4 3 1765 562 267 120 25 chrX 154755237 154755571 -11894725 + L1M2 LINE L1 5393 5765 -538 3 1765 20463 158 58 49 chrX 154755599 154759924 -11890372 + L1VL4 LINE L1 756 5291 -592 3 1765 303 218 53 53 chrX 154759924 154760113 -11890183 - RMER17C LTR ERVK -146 264 76 3 1765 20463 158 58 49 chrX 154760113 154760485 -11889811 + L1VL4 LINE L1 5292 5683 -200 3 1765 7550 73 3 2 chrX 154760494 154761926 -11888370 - L1_Mus2 LINE L1 0 6566 5132 3 1765 2311 95 0 65 chrX 154761916 154762288 -11888008 + Lx2 LINE L1 5690 6037 -960 3 1765 2885 39 7 116 chrX 154762288 154762726 -11887570 - RLTR10 LTR ERVK 0 390 1 3 1765 8754 20 1 0 chrX 154762728 154763722 -11886574 - RLTR10-int LTR ERVK -3 1984 990 3 1765 330 248 62 39 chrX 154763804 154763934 -11886362 - RLTR10-int LTR ERVK -5987 1594 1462 3 1765 8217 37 6 2 chrX 154763998 154764980 -11885316 - RLTR10-int LTR ERVK -989 998 13 3 1765 2874 41 7 116 chrX 154765027 154765465 -11884831 - RLTR10 LTR ERVK 0 390 1 3 1765 5384 160 21 2 chrX 154765465 154766412 -11883884 + Lx2 LINE L1 6032 6996 -1 3 1765 1295 96 21 5 chrX 154766457 154766646 -11883650 - B2_Mm2 SINE B2 -2 193 2 3 1765 308 307 120 40 chrX 154767117 154767466 -11882830 + L1M5 LINE L1 3378 3754 -2392 3 1765 1357 309 35 7 chrX 154767617 154768050 -11882246 - Lx8 LINE L1 -899 6574 6130 3 1765 521 293 45 22 chrX 154768049 154768227 -11882069 + Lx8 LINE L1 6959 7140 -333 3 1765 625 160 199 0 chrX 154768232 154768363 -11881933 - URR1A DNA MER1_type -69 157 1 3 1765 7634 36 0 0 chrX 154768881 154769785 -11880511 - L1Md_T LINE L1 -2 6580 5677 3 1765 25224 32 2 11 chrX 154769786 154773641 -11876655 - L1Md_T LINE L1 -1643 4240 423 3 1765 795 173 30 0 chrX 154773844 154773977 -11876319 + B1_Mur3 SINE Alu 2 138 -11 3 1765 21 36 0 0 chrX 154774175 154774203 -11876093 + AT_rich Low_complexity Low_complexity 1 28 0 3 1765 1778 269 32 47 chrX 154774229 154774997 -11875299 - L1M2 LINE L1 -863 5449 4691 3 1765 1360 314 81 12 chrX 154775010 154775665 -11874631 + Lx7 LINE L1 6760 7471 -2 3 1765 2369 109 86 10 chrX 154775673 154776079 -11874217 + L1_Mur1 LINE L1 3517 3953 -1933 3 1765 5250 108 45 12 chrX 154776079 154776898 -11873398 + Lx3B LINE L1 6123 6968 -5 3 1765 26 30 0 0 chrX 154776899 154776932 -11873364 + AT_rich Low_complexity Low_complexity 1 33 0 3 1765 714 269 84 0 chrX 154776932 154777338 -11872958 - L1M2 LINE L1 -1455 4688 4249 3 1765 581 239 87 49 chrX 154777576 154777761 -11872535 + Lx6 LINE L1 7265 7456 -4 3 1765 418 238 0 0 chrX 154777768 154777848 -11872448 + RMER30 DNA MER1_type 113 192 -10 3 1765 447 288 42 35 chrX 154777937 154778221 -11872075 + L1M5 LINE L1 4317 4602 -1544 3 1765 1919 166 80 3 chrX 154778898 154779249 -11871047 + ORR1C1 LTR MaLR 1 378 0 3 1765 333 0 0 0 chrX 154779293 154779330 -11870966 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 3 1765 989 154 39 0 chrX 154779330 154779486 -11870810 - B2_Mm2 SINE B2 -33 162 1 4 1765 666 26 0 0 chrX 154779733 154779811 -11870485 - L1Md_F3 LINE L1 -116 6468 6391 4 1765 1462 249 38 106 chrX 154779820 154780265 -11870031 - Lx8 LINE L1 -1 7472 7041 4 1765 198 0 0 0 chrX 154780265 154780287 -11870009 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 4 1765 1462 249 38 106 chrX 154780287 154780426 -11869870 - Lx8 LINE L1 -433 7040 6928 4 1765 1909 301 24 6 chrX 154780452 154780993 -11869303 - Lx8 LINE L1 -715 6758 6208 4 1765 479 301 87 0 chrX 154781241 154781414 -11868882 - Charlie22a DNA MER1_type -4 487 300 4 1765 14269 132 4 2 chrX 154781518 154783991 -11866305 + L1_Mus3 LINE L1 3575 6052 -586 4 1765 961 165 44 15 chrX 154783995 154784198 -11866098 + L1_Mus3 LINE L1 6430 6638 0 4 1765 5265 265 70 36 chrX 154784205 154784739 -11865557 + L1_Mur3 LINE L1 3477 4029 -1851 4 1765 470 162 527 0 chrX 154784739 154784887 -11865409 + URR1A DNA MER1_type 1 226 0 4 1765 5265 265 70 36 chrX 154784887 154785731 -11864565 + L1_Mur3 LINE L1 4030 4949 -931 4 1765 5339 67 3 3 chrX 154785731 154786425 -11863871 - Lx3_Mus LINE L1 0 7009 6316 4 1765 5265 265 70 36 chrX 154786425 154787060 -11863236 + L1_Mur3 LINE L1 4950 5558 -322 4 1765 346 367 142 26 chrX 154787060 154787552 -11862744 - L2 LINE L2 -861 2558 2010 4 1765 488 279 83 13 chrX 154787594 154787750 -11862546 + RMER10B LTR ERVL 179 345 -53 4 1765 193 361 183 37 chrX 154787895 154788011 -11862285 - L2 LINE L2 -1615 1804 1675 4 1765 617 46 0 0 chrX 154788011 154788098 -11862198 + L1Md_F2 LINE L1 6493 6579 -3 4 1765 193 361 183 37 chrX 154788098 154788499 -11861797 - L2 LINE L2 -1745 1674 1211 4 1765 299 96 19 0 chrX 154788991 154789043 -11861253 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 1765 330 26 0 0 chrX 154789369 154789408 -11860888 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1765 850 250 35 8 chrX 154790032 154790286 -11860010 + L1MA8 LINE L1 5392 5652 -648 4 1765 210 71 0 0 chrX 154790341 154790369 -11859927 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 4 1765 249 98 0 0 chrX 154790414 154790455 -11859841 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 4 1765 472 245 20 0 chrX 154790455 154790557 -11859739 - RSINE1 SINE B4 -51 114 11 4 1765 654 290 26 100 chrX 154790565 154790869 -11859427 + L1MA8 LINE L1 5638 5920 -371 4 1765 4632 148 64 32 chrX 154790869 154791749 -11858547 + RMER13B LTR ERVK 1 908 0 4 1765 654 290 26 100 chrX 154791749 154791785 -11858511 + L1MA8 LINE L1 5921 5953 -338 4 1765 1473 258 67 43 chrX 154791819 154792191 -11858105 + MTD LTR MaLR 1 381 -38 4 1765 180 0 0 0 chrX 154792207 154792227 -11858069 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1765 256 204 0 0 chrX 154792240 154792289 -11858007 - L1M3 LINE L1 -1526 4614 4566 4 1765 585 76 0 0 chrX 154792334 154792413 -11857883 + (CCTAT)n Simple_repeat Simple_repeat 2 80 0 4 1765 1508 150 22 197 chrX 154792425 154792831 -11857465 - ORR1B2 LTR MaLR -32 335 1 4 1765 423 214 29 48 chrX 154792846 154792949 -11857347 - B1F SINE Alu -1 148 48 4 1765 231 245 0 0 chrX 154792906 154792959 -11857337 - 4.5SRNA scRNA scRNA -6 88 36 4 1765 4044 240 52 3 chrX 154793025 154793917 -11856379 - Lx6 LINE L1 -4 7456 6522 4 1765 307 239 66 22 chrX 154793968 154794105 -11856191 - L1M3 LINE L1 -1725 4415 4273 4 1765 15720 147 43 21 chrX 154794196 154794743 -11855553 + Lx4B LINE L1 2933 3477 -2400 4 1765 243 0 0 0 chrX 154794743 154794770 -11855526 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 1765 15720 147 43 21 chrX 154794770 154795519 -11854777 + Lx4B LINE L1 3478 4223 -1654 4 1765 1159 86 73 17 chrX 154795519 154795696 -11854600 + B2_Mm2 SINE B2 1 187 -8 4 220 15720 154 28 19 chrX 154795696 154798453 -11851843 + Lx4B LINE L1 4224 7051 -7 4 1766 27 0 0 0 chrX 154798497 154798524 -11851772 + AT_rich Low_complexity Low_complexity 1 27 0 4 1766 1079 248 129 101 chrX 154798945 154799150 -11851146 + L1MD LINE L1 2971 3202 -2944 4 1766 552 342 0 6 chrX 154799150 154799312 -11850984 + RSINE1 SINE B4 2 162 -3 4 1766 1079 248 129 101 chrX 154799312 154800120 -11850176 + L1MD LINE L1 3203 4012 -2134 4 1766 1273 319 103 14 chrX 154800201 154800694 -11849602 + MER74A LTR ERVL 2 538 -20 4 1766 506 359 39 58 chrX 154800694 154801158 -11849138 + Lx8 LINE L1 7009 7463 -10 4 1766 192 77 0 0 chrX 154801255 154801281 -11849015 + (CATA)n Simple_repeat Simple_repeat 2 27 0 4 1766 255 31 0 0 chrX 154801376 154801408 -11848888 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1766 1461 252 45 40 chrX 154801409 154801835 -11848461 - Lx9 LINE L1 -169 7475 7048 4 1766 309 109 0 0 chrX 154801856 154801902 -11848394 + (TCC)n Simple_repeat Simple_repeat 3 48 0 4 1766 681 203 0 0 chrX 154801927 154802050 -11848246 - Lx9 LINE L1 -610 7034 6912 4 1766 375 73 0 0 chrX 154802167 154802222 -11848074 + (CATA)n Simple_repeat Simple_repeat 2 56 0 4 1766 738 275 156 31 chrX 154802796 154803276 -11847020 + L1MD LINE L1 4258 4797 -1349 4 1766 352 232 0 97 chrX 154803487 154803611 -11846685 + L1MD LINE L1 4841 4952 -1194 4 1766 259 194 68 27 chrX 154803622 154803696 -11846600 - L1MD LINE L1 -974 5172 5096 4 1766 277 24 48 0 chrX 154804131 154804173 -11846123 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 1766 1116 59 0 0 chrX 154804173 154804309 -11845987 - B1_Mus2 SINE Alu -10 137 2 4 1766 277 257 36 0 chrX 154804820 154804888 -11845408 - B3 SINE B2 -103 113 43 4 1766 225 266 0 21 chrX 154805017 154805113 -11845183 - Lx6 LINE L1 -27 7433 7340 4 1766 2244 224 57 91 chrX 154805102 154805721 -11844575 - Lx5 LINE L1 -276 6774 6177 4 1766 300 161 0 0 chrX 154805757 154805819 -11844477 + (TAA)n Simple_repeat Simple_repeat 2 63 0 4 1766 619 192 8 32 chrX 154805898 154806022 -11844274 - B1_Mur2 SINE Alu 0 149 29 4 1766 1277 254 166 39 chrX 154806564 154807129 -11843167 + RLTR26 LTR ERVK 1 637 -5 4 1766 675 200 54 32 chrX 154807717 154807913 -11842383 + B3 SINE B2 2 195 0 4 1766 409 362 57 45 chrX 154807996 154808266 -11842030 - L2b LINE L2 -255 3120 2843 4 1766 339 130 0 0 chrX 154808266 154808320 -11841976 + (ATG)n Simple_repeat Simple_repeat 3 56 0 4 1766 226 369 77 48 chrX 154808643 154808891 -11841405 - L2b LINE L2 -576 2843 2589 4 1766 460 395 10 14 chrX 154808896 154809104 -11841192 - MER63A DNA AcHobo 0 210 4 4 1766 740 358 105 16 chrX 154809104 154809598 -11840698 - L2b LINE L2 -835 2584 2047 4 1766 825 38 0 0 chrX 154809831 154809936 -11840360 + (TC)n Simple_repeat Simple_repeat 2 106 0 4 1766 351 0 0 0 chrX 154809936 154809974 -11840322 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1766 247 184 0 58 chrX 154809974 154810026 -11840270 - B4A SINE B4 -242 50 2 4 1766 1309 314 53 20 chrX 154810134 154810641 -11839655 + FordPrefect DNA Tip100 986 1509 -174 4 1766 429 293 60 0 chrX 154810650 154810783 -11839513 - B4 SINE B4 -26 266 126 4 1766 612 59 0 0 chrX 154810800 154810885 -11839411 + (TG)n Simple_repeat Simple_repeat 2 86 0 4 1766 3113 248 111 58 chrX 154811590 154812388 -11837908 + RMER1A Other Other 1 513 -553 4 1766 531 0 0 0 chrX 154812388 154812447 -11837849 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 1766 3113 229 187 52 chrX 154812447 154813095 -11837201 + RMER1A Other Other 219 1027 -3 4 1766 1343 294 68 13 chrX 154813674 154814070 -11836226 + MLT1G1 LTR MaLR 159 576 -3 4 1766 230 369 76 18 chrX 154814925 154815096 -11835200 + MER5A DNA MER1_type 9 189 0 4 1766 341 291 153 44 chrX 154815649 154815897 -11834399 - L1ME1 LINE L1 -94 6085 5811 4 1766 8020 84 3 1 chrX 154815899 154817748 -11832548 - L1_Mus1 LINE L1 0 6567 4713 4 1766 21 36 0 0 chrX 154818455 154818483 -11831813 + AT_rich Low_complexity Low_complexity 1 28 0 4 1766 292 338 55 41 chrX 154818691 154818836 -11831460 - LTR16C LTR ERVL 0 489 343 4 1766 796 228 21 21 chrX 154820130 154820318 -11829978 - B3 SINE B2 -4 212 25 4 1766 689 256 64 40 chrX 154820370 154820812 -11829484 + L1M2 LINE L1 5142 5604 -693 4 1766 495 261 101 47 chrX 154820818 154820987 -11829309 + B3A SINE B2 5 182 -16 4 1766 434 324 86 55 chrX 154821367 154821622 -11828674 + LTR16A1 LTR ERVL 174 436 -20 4 1766 1006 280 32 0 chrX 154821712 154821994 -11828302 + B4A SINE B4 1 291 -1 4 1766 338 220 111 21 chrX 154822030 154822174 -11828122 - MER33 DNA MER1_type -74 250 94 4 1766 1084 191 63 125 chrX 154822374 154822709 -11827587 + RMER10B LTR ERVL 85 398 0 4 1766 1694 201 43 43 chrX 154822775 154822971 -11827325 - ORR1D1 LTR MaLR 0 374 173 4 1766 999 107 0 0 chrX 154822971 154823149 -11827147 + (GA)n Simple_repeat Simple_repeat 1 178 0 4 1766 1694 201 43 43 chrX 154823149 154823326 -11826970 - ORR1D1 LTR MaLR -202 172 1 4 1766 257 361 99 8 chrX 154824180 154824311 -11825985 - B1F SINE Alu -1 148 6 4 1766 304 319 66 82 chrX 154826243 154826475 -11823821 - MLT1G LTR MaLR -361 230 3 4 1766 1160 155 0 57 chrX 154826606 154826706 -11823590 + L1_Mur3 LINE L1 3499 3598 -2282 4 1766 1089 79 6 18 chrX 154826706 154826873 -11823423 - L1Md_F2 LINE L1 -11 6571 6407 4 1766 1160 155 0 57 chrX 154826873 154827018 -11823278 + L1_Mur3 LINE L1 3599 3730 -2150 4 1766 3109 176 58 11 chrX 154827008 154827244 -11823052 + Lx6 LINE L1 6650 6883 -577 4 1766 1620 0 0 0 chrX 154827244 154827500 -11822796 + (GGGAGA)n Simple_repeat Simple_repeat 1 256 0 4 1766 3109 176 58 11 chrX 154827500 154827836 -11822460 + Lx6 LINE L1 6884 7249 -211 4 1766 265 375 144 29 chrX 154827841 154828215 -11822081 - L2 LINE L2 -660 2759 2343 4 1766 233 328 0 15 chrX 154829323 154829388 -11820908 - ID2 SINE ID -18 65 2 4 1766 277 283 131 52 chrX 154829515 154829668 -11820628 + MLT1M LTR MaLR 252 416 -256 4 1766 643 368 72 3 chrX 154829922 154830227 -11820069 - LTR16C LTR ERVL -17 472 147 4 1766 758 251 24 0 chrX 154831053 154831220 -11819076 + B3 SINE B2 18 188 -28 4 1766 369 0 0 0 chrX 154831231 154831272 -11819024 + (TAAAA)n Simple_repeat Simple_repeat 5 45 0 4 1766 632 227 77 81 chrX 154831425 154831698 -11818598 + Lx9 LINE L1 7368 7639 -5 4 1766 318 219 0 30 chrX 154831768 154831834 -11818462 - ID4 SINE ID -15 68 5 4 1766 839 258 48 14 chrX 154831841 154832136 -11818160 - L1MB3 LINE L1 0 6183 5879 4 1766 617 328 135 15 chrX 154832554 154832879 -11817417 + MLT1L LTR MaLR 168 531 -79 4 1766 361 335 144 53 chrX 154833115 154833323 -11816973 - LTR16A LTR ERVL -219 232 6 4 1766 11239 188 15 13 chrX 154834318 154834918 -11815378 + L1_Mur2 LINE L1 813 1413 -2499 4 1766 1357 77 0 0 chrX 154834918 154835101 -11815195 + L1_Mus2 LINE L1 6383 6565 -1 4 1766 11239 155 40 18 chrX 154835101 154836687 -11813609 + L1_Mur2 LINE L1 1414 3049 -863 4 1766 261 0 0 0 chrX 154836687 154836716 -11813580 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 4 1766 11239 155 40 18 chrX 154836716 154837158 -11813138 + L1_Mur2 LINE L1 3050 3477 -435 4 1766 2727 174 68 55 chrX 154837160 154838071 -11812225 + RLTR13D1 LTR ERVK 1 855 0 4 1766 1498 110 29 4 chrX 154838080 154838326 -11811970 + L1_Mus3 LINE L1 3481 3732 -2151 4 1766 2077 111 122 16 chrX 154838326 154838694 -11811602 + RLTR9B2 LTR ERVK 14 420 0 4 1766 13169 134 12 9 chrX 154838694 154839595 -11810701 + L1_Mus3 LINE L1 3736 4630 -1253 4 1766 207 0 0 0 chrX 154839595 154839618 -11810678 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 4 1766 13169 108 7 9 chrX 154839618 154841616 -11808680 + L1_Mus3 LINE L1 4631 6636 -2 4 1766 13930 146 57 7 chrX 154841590 154842971 -11807325 + Lx4B LINE L1 3227 4623 -1254 5 1766 225 0 0 0 chrX 154842971 154842996 -11807300 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 5 1766 13930 168 50 56 chrX 154842996 154844940 -11805356 + Lx4B LINE L1 4624 6581 -1 5 1766 2205 218 135 40 chrX 154844949 154845593 -11804703 + Lx4B LINE L1 6337 7041 -17 5 1766 180 0 0 0 chrX 154845595 154845615 -11804681 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 5 1766 587 159 9 0 chrX 154845852 154845965 -11804331 + (TCTA)n Simple_repeat Simple_repeat 4 117 0 5 1766 501 17 0 0 chrX 154846010 154846068 -11804228 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1766 522 298 8 0 chrX 154846068 154846189 -11804107 - RSINE1 SINE B4 -41 124 3 5 1766 880 240 126 98 chrX 154846581 154847135 -11803161 - MER34A LTR ERV1 0 571 2 5 1766 441 300 61 15 chrX 154847354 154847486 -11802810 - B1F1 SINE Alu -5 144 7 5 1766 628 299 223 28 chrX 154847687 154848010 -11802286 + MLT1A0 LTR MaLR 21 406 -2 5 1766 21 82 0 0 chrX 154848115 154848164 -11802132 + AT_rich Low_complexity Low_complexity 1 49 0 5 1766 4181 130 26 80 chrX 154848214 154848993 -11801303 - Lx LINE L1 0 6654 5918 5 1766 7688 117 38 27 chrX 154848995 154850698 -11799598 - L1VL4 LINE L1 -2915 2971 1071 5 1766 2427 72 12 12 chrX 154850698 154851035 -11799261 - L1Md_F2 LINE L1 -1 6581 6245 5 1766 5659 68 27 9 chrX 154851035 154851801 -11798495 + L1Md_F2 LINE L1 5791 6570 -12 5 1766 22 70 0 0 chrX 154851968 154852011 -11798285 + AT_rich Low_complexity Low_complexity 1 43 0 5 1766 439 323 140 23 chrX 154853325 154853735 -11796561 - MER34A1 LTR ERV1 -3 584 81 5 1766 907 119 6 12 chrX 154853943 154854104 -11796192 + Lx LINE L1 6495 6654 0 5 1766 7475 67 16 8 chrX 154854358 154855442 -11794854 + L1_Mus1 LINE L1 5468 6567 0 5 1766 291 345 115 14 chrX 154855995 154856229 -11794067 + MIRb SINE MIR 6 268 0 5 1766 209 323 29 57 chrX 154856678 154856783 -11793513 - MIR3 SINE MIR 0 208 107 5 1766 3412 48 29 0 chrX 154857135 154857555 -11792741 - L1_Mus1 LINE L1 0 6567 6136 5 1766 204 122 0 0 chrX 154857719 154857760 -11792536 + (A)n Simple_repeat Simple_repeat 1 41 0 5 1766 740 265 90 26 chrX 154858336 154858603 -11791693 + B4A SINE B4 1 284 -8 5 1766 276 325 114 61 chrX 154859018 154859280 -11791016 + B4 SINE B4 1 276 -16 5 1766 908 280 98 14 chrX 154859905 154860263 -11790033 + MER63B DNA AcHobo 49 436 0 5 1766 322 309 127 56 chrX 154862467 154862680 -11787616 + B4 SINE B4 43 270 -22 5 1766 373 267 20 10 chrX 154862829 154862931 -11787365 + B3A SINE B2 80 182 -16 5 1766 22 70 0 0 chrX 154863787 154863830 -11786466 + AT_rich Low_complexity Low_complexity 1 43 0 5 1766 4987 34 0 0 chrX 154864035 154864622 -11785674 - L1_Mus2 LINE L1 -394 6173 5587 5 1766 2738 81 3 3 chrX 154864629 154865000 -11785296 + L1_Mus2 LINE L1 6188 6558 -8 5 1766 459 78 0 0 chrX 154866061 154866125 -11784171 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 1766 283 276 26 26 chrX 154866344 154866422 -11783874 - MER21B LTR ERV1 -762 101 24 5 1766 589 259 7 27 chrX 154866831 154866978 -11783318 - RSINE1 SINE B4 -17 148 5 5 1766 381 298 28 19 chrX 154867342 154867448 -11782848 + PB1D10 SINE Alu 4 110 -7 5 1766 326 331 105 79 chrX 154867905 154868060 -11782236 + LTR16C LTR ERVL 180 348 -141 5 1766 929 158 0 6 chrX 154868060 154868238 -11782058 + Lx LINE L1 6476 6652 -2 5 1766 326 331 105 79 chrX 154868238 154868272 -11782024 + LTR16C LTR ERVL 349 374 -115 5 1766 265 304 86 46 chrX 154868336 154868488 -11781808 - MIRb SINE MIR -74 194 37 5 1766 396 319 51 15 chrX 154868941 154869117 -11781179 - MIR3 SINE MIR -8 200 23 5 1766 1538 191 130 24 chrX 154869297 154869635 -11780661 + ORR1D1 LTR MaLR 1 374 0 5 1766 374 313 38 77 chrX 154869813 154870048 -11780248 + MLT1F LTR MaLR 164 389 -159 5 1766 1351 240 72 20 chrX 154870145 154870493 -11779803 - MTE2a LTR MaLR -10 369 4 5 1766 332 384 107 30 chrX 154871239 154871577 -11778719 + MLT2F LTR ERVL 18 381 -282 5 1766 337 273 13 13 chrX 154871590 154871668 -11778628 + ID2 SINE ID 6 83 0 5 1766 566 324 31 39 chrX 154871690 154871950 -11778346 + MLT2F LTR ERVL 406 663 0 5 1766 222 298 35 35 chrX 154872019 154872106 -11778190 - L2c LINE L2 -20 3367 3281 5 1766 21 0 0 0 chrX 154873033 154873054 -11777242 + AT_rich Low_complexity Low_complexity 1 21 0 5 1766 31829 82 17 4 chrX 154873073 154878035 -11772261 + L1Md_F2 LINE L1 559 5586 -297 5 1766 7038 86 15 19 chrX 154878035 154879034 -11771262 + L1Md_F2 LINE L1 5587 6581 -1 5 1766 234 0 0 0 chrX 154879440 154879466 -11770830 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 5 1766 368 276 56 24 chrX 154880422 154880548 -11769748 - MIR3 SINE MIR -3 205 76 5 1766 352 335 140 22 chrX 154880747 154880976 -11769320 - MIRb SINE MIR -9 259 4 5 1766 2045 92 3 69 chrX 154881783 154882132 -11768164 - IAPLTR1a_Mm LTR ERVK -11 326 1 5 1766 7343 17 2 0 chrX 154882132 154882957 -11767339 - IAPEz-int LTR ERVK 0 6481 5655 5 1766 768 121 8 8 chrX 154882955 154883072 -11767224 - IAPEz-int LTR ERVK -5328 2352 2236 5 1766 452 78 0 30 chrX 154883058 154883124 -11767172 - IAPEz-int LTR ERVK -5059 1422 1359 5 1766 3400 53 5 11 chrX 154883124 154883866 -11766430 - IAPEz-int LTR ERVK -5819 662 1 5 1766 2045 92 3 69 chrX 154883867 154884216 -11766080 - IAPLTR1a_Mm LTR ERVK -11 326 1 5 1766 1410 33 32 27 chrX 154884506 154884692 -11765604 + B2_Mm2 SINE B2 1 187 -8 5 1766 749 247 13 31 chrX 154884702 154884861 -11765435 + B3A SINE B2 2 157 -41 5 1766 242 208 19 0 chrX 154884870 154884923 -11765373 + CT-rich Low_complexity Low_complexity 2 55 0 5 1766 23 33 0 0 chrX 154884925 154884955 -11765341 + AT_rich Low_complexity Low_complexity 1 30 0 5 1766 2416 171 67 8 chrX 154886228 154886707 -11763589 - RMER5 LTR ERV1 -26 508 2 5 1766 465 19 0 0 chrX 154886778 154886832 -11763464 + (TA)n Simple_repeat Simple_repeat 1 54 0 5 1766 294 127 42 0 chrX 154887512 154887583 -11762713 + (TA)n Simple_repeat Simple_repeat 2 75 0 5 1766 894 170 0 0 chrX 154887744 154887891 -11762405 + B1_Mus1 SINE Alu 1 147 -1 5 1766 200 158 0 17 chrX 154887905 154887963 -11762333 + A-rich Low_complexity Low_complexity 4 60 0 5 1766 1623 251 22 3 chrX 154889745 154890108 -11760188 - ORR1D2 LTR MaLR 0 370 1 5 1766 2204 79 176 0 chrX 154890346 154890727 -11759569 - RLTR47_MM LTR ERV1 -83 449 2 5 1766 526 341 15 15 chrX 154890823 154891094 -11759202 - MuRRS4-int LTR ERV1 -130 4933 4663 5 1766 229 282 112 25 chrX 154891381 154891461 -11758835 + MLT2F LTR ERVL 17 103 -560 5 1766 423 399 49 21 chrX 154891576 154891904 -11758392 + MLT2F LTR ERVL 286 622 -41 5 1766 46 19 0 0 chrX 154891908 154891961 -11758335 + AT_rich Low_complexity Low_complexity 1 53 0 5 1766 616 236 31 0 chrX 154892632 154892759 -11757537 + B1_Mur1 SINE Alu 18 148 -1 5 1766 1225 292 122 27 chrX 154892797 154893906 -11756390 + L1MB8 LINE L1 4472 5684 -490 5 1766 1122 282 112 39 chrX 154893874 154895225 -11755071 + L1M3 LINE L1 4426 5865 -15 5 1766 26 0 0 0 chrX 154895381 154895407 -11754889 + AT_rich Low_complexity Low_complexity 1 26 0 5 1766 407 277 15 8 chrX 154895432 154895563 -11754733 + L1MB8 LINE L1 5821 5952 -226 5 1766 7774 58 0 2 chrX 154895539 154896526 -11753770 + L1Md_T LINE L1 4602 5586 -297 5 1766 8512 29 0 0 chrX 154896526 154897521 -11752775 + L1Md_T LINE L1 5587 6581 -1 5 1766 2500 34 0 0 chrX 154897521 154897814 -11752482 + L1Md_F2 LINE L1 5294 5586 -297 5 1766 7950 54 1 3 chrX 154897814 154898811 -11751485 + L1Md_F2 LINE L1 5587 6581 -1 5 1766 319 314 127 13 chrX 154899051 154899280 -11751016 + L1MB7 LINE L1 5928 6182 -2 5 1766 21 0 0 0 chrX 154899745 154899766 -11750530 + AT_rich Low_complexity Low_complexity 1 21 0 5 1766 844 243 22 11 chrX 154899771 154899950 -11750346 + B3A SINE B2 2 182 -16 5 1766 203 288 71 59 chrX 154900256 154900341 -11749955 - MER5A DNA MER1_type -22 167 82 5 1766 559 291 55 47 chrX 154900672 154900925 -11749371 - MIRc SINE MIR -7 261 7 5 1766 2082 148 129 0 chrX 154901231 154901602 -11748694 + MTC LTR MaLR 3 421 0 5 1766 632 278 45 10 chrX 154901815 154902015 -11748281 + B3 SINE B2 1 207 -9 5 1766 281 239 179 114 chrX 154902046 154902169 -11748127 - MLT1J1 LTR MaLR -260 184 54 5 1766 441 0 0 0 chrX 154902432 154902481 -11747815 + (TC)n Simple_repeat Simple_repeat 1 49 0 5 1766 275 290 14 0 chrX 154902647 154902716 -11747580 - ID4_ SINE ID -13 70 1 5 1766 455 229 152 0 chrX 154902748 154902853 -11747443 - PB1 SINE Alu -2 125 5 5 1766 1141 286 48 56 chrX 154902910 154903304 -11746992 + MTE2a LTR MaLR 1 376 -3 5 1766 3723 116 14 23 chrX 154903574 154904158 -11746138 - Lx2 LINE L1 -11 6986 6124 5 1766 253 234 15 15 chrX 154904784 154904849 -11745447 + MTC LTR MaLR 1 65 -356 5 1766 249 366 18 0 chrX 154905877 154905989 -11744307 - L2a LINE L2 -13 3413 3300 5 1766 826 204 124 12 chrX 154906064 154906233 -11744063 + B3 SINE B2 1 188 -28 5 1766 7353 192 103 29 chrX 154906262 154908313 -11741983 + Lx7 LINE L1 5193 7407 -289 5 1766 1637 91 12 0 chrX 154908485 154908726 -11741570 + L1_Mus3 LINE L1 6352 6595 -43 5 1766 954 136 0 0 chrX 154908797 154908952 -11741344 + (GGAA)n Simple_repeat Simple_repeat 4 158 0 5 1766 855 0 0 0 chrX 154908963 154909058 -11741238 + (GAGAA)n Simple_repeat Simple_repeat 1 95 0 5 1766 239 202 8 80 chrX 154909906 154910015 -11740281 + L1M4b LINE L1 3171 3228 -3778 5 1766 504 0 0 0 chrX 154910106 154910162 -11740134 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1766 528 354 18 18 chrX 154910185 154910461 -11739835 - B4A SINE B4 -14 278 3 5 1766 381 75 0 0 chrX 154910746 154910799 -11739497 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1766 546 336 74 63 chrX 154910801 154911071 -11739225 - MLT1A0 LTR MaLR -70 295 23 5 1766 240 348 93 29 chrX 154911194 154911333 -11738963 + RSINE1 SINE B4 4 151 -14 5 1766 1764 288 104 13 chrX 154911387 154912378 -11737918 + L1M4b LINE L1 4390 5470 -1536 5 1766 4897 169 118 39 chrX 154912412 154913605 -11736691 + L1_Mur3 LINE L1 306 1595 -4285 5 1766 922 172 38 85 chrX 154913608 154913901 -11736395 + L1_Mur3 LINE L1 4501 4779 -1101 5 1766 1061 176 0 56 chrX 154913898 154914096 -11736200 + L1_Mur3 LINE L1 5488 5674 -206 5 1766 4769 220 55 86 chrX 154914097 154915497 -11734799 + Lx7 LINE L1 6260 7616 -80 5 1766 477 0 0 0 chrX 154915502 154915555 -11734741 + (GGA)n Simple_repeat Simple_repeat 1 53 0 5 1766 462 170 0 0 chrX 154915616 154915710 -11734586 + GA-rich Low_complexity Low_complexity 4 97 0 5 1766 1404 251 71 49 chrX 154916038 154916687 -11733609 + L1M4b LINE L1 5529 6191 -815 5 1766 8208 61 14 3 chrX 154916705 154917767 -11732529 + L1Md_F2 LINE L1 4513 5586 -297 6 1766 7822 54 4 3 chrX 154917768 154918750 -11731546 + L1Md_F2 LINE L1 5588 6570 -12 6 1766 260 314 136 20 chrX 154918776 154919026 -11731270 + L1M5 LINE L1 2757 3035 -3111 6 1766 547 252 167 6 chrX 154919049 154919205 -11731091 + RMER5 LTR ERV1 1 181 -353 6 1766 3369 204 24 6 chrX 154919218 154920039 -11730257 - Lx4B LINE L1 -27 6973 6126 6 1766 4667 102 36 4 chrX 154920077 154920776 -11729520 + L1_Mur2 LINE L1 5093 5813 -64 6 1766 2645 138 92 5 chrX 154920776 154921221 -11729075 + Lx4A LINE L1 6574 7057 -1 6 1766 26 30 0 0 chrX 154921221 154921254 -11729042 + AT_rich Low_complexity Low_complexity 1 33 0 6 1766 1949 31 0 0 chrX 154921430 154921657 -11728639 + L1Md_F2 LINE L1 5360 5586 -297 6 1766 8108 43 1 6 chrX 154921657 154922656 -11727640 + L1Md_F2 LINE L1 5587 6580 -2 6 1766 234 0 0 0 chrX 154923236 154923262 -11727034 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 6 1766 1105 88 0 0 chrX 154924158 154924306 -11725990 + B1_Mus1 SINE Alu 1 148 0 6 1766 419 141 0 13 chrX 154924312 154924350 -11725946 + polypurine Low_complexity Low_complexity 3 40 0 6 1766 1103 122 0 11 chrX 154924350 154924532 -11725764 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 6 1766 419 141 0 13 chrX 154924532 154924572 -11725724 + polypurine Low_complexity Low_complexity 41 80 0 6 1766 385 343 51 7 chrX 154925910 154926048 -11724248 + B1F SINE Alu 6 149 0 6 1766 802 247 45 48 chrX 154926473 154926784 -11723512 - L1MA6 LINE L1 -438 5862 5553 6 1767 339 364 63 51 chrX 154927184 154927421 -11722875 + MER121 Unknown Unknown 137 376 -36 6 1767 441 0 0 0 chrX 154927526 154927575 -11722721 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1767 572 342 58 99 chrX 154927592 154927798 -11722498 - B4 SINE B4 -4 288 70 6 1767 369 0 0 0 chrX 154927798 154927839 -11722457 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1767 1018 74 30 0 chrX 154927839 154927974 -11722322 - B1_Mus1 SINE Alu -8 140 2 6 1767 572 342 58 99 chrX 154927974 154928058 -11722238 - B4 SINE B4 -223 69 10 6 1767 21 0 0 0 chrX 154928073 154928094 -11722202 + AT_rich Low_complexity Low_complexity 1 21 0 6 1767 1851 186 24 37 chrX 154928825 154929204 -11721092 + ORR1D1 LTR MaLR 1 374 0 6 1767 440 240 41 82 chrX 154930119 154930309 -11719987 + L1ME2z LINE L1 5834 6022 -422 6 1767 251 346 168 28 chrX 154930339 154930553 -11719743 - RMER15 LTR ERVL -52 523 280 6 1767 396 290 67 9 chrX 154930877 154931100 -11719196 + L1ME2z LINE L1 6205 6440 -4 6 1767 232 230 9 48 chrX 154931144 154931221 -11719075 + T-rich Low_complexity Low_complexity 27 101 0 6 1767 243 197 0 15 chrX 154931145 154931212 -11719084 + (TTTG)n Simple_repeat Simple_repeat 3 68 0 6 1767 1230 27 7 0 chrX 154931221 154931367 -11718929 - B1_Mm SINE Alu 0 147 1 6 1767 232 230 9 48 chrX 154931367 154931394 -11718902 + T-rich Low_complexity Low_complexity 1 26 0 6 1767 701 277 22 11 chrX 154931580 154931759 -11718537 - B3A SINE B2 -17 181 1 6 1767 21 57 0 0 chrX 154932388 154932423 -11717873 + AT_rich Low_complexity Low_complexity 1 35 0 6 1767 186 71 0 0 chrX 154932464 154932492 -11717804 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1767 12708 53 1 2 chrX 154932494 154934797 -11715499 - L1Md_F2 LINE L1 0 6582 4282 6 1767 1558 176 256 95 chrX 154934806 154935023 -11715273 + RLTR25A LTR ERVK 520 695 -408 6 1767 1171 86 51 11 chrX 154935023 154935199 -11715097 + B2_Mm1t SINE B2 2 184 -9 6 1767 1558 176 256 95 chrX 154935199 154935484 -11714812 + RLTR25A LTR ERVK 696 1103 0 6 1767 2077 321 6 15 chrX 154935489 154936150 -11714146 + Lx7 LINE L1 6557 7211 -485 6 1767 25 31 0 0 chrX 154936326 154936358 -11713938 + AT_rich Low_complexity Low_complexity 1 32 0 6 1767 29 47 0 0 chrX 154936376 154936419 -11713877 + AT_rich Low_complexity Low_complexity 1 43 0 6 1767 24 67 0 0 chrX 154936630 154936675 -11713621 + AT_rich Low_complexity Low_complexity 1 45 0 6 1767 772 298 47 36 chrX 154936727 154937002 -11713294 + B4A SINE B4 3 280 -12 6 1767 348 24 0 0 chrX 154937014 154937055 -11713241 + (CTA)n Simple_repeat Simple_repeat 2 42 0 6 1767 252 143 0 0 chrX 154937055 154937097 -11713199 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 1767 812 97 42 0 chrX 154937281 154937425 -11712871 + (TTTTC)n Simple_repeat Simple_repeat 3 152 0 6 1767 940 315 159 3 chrX 154937778 154938157 -11712139 - MLT1H LTR MaLR -3 546 76 6 1767 391 388 97 75 chrX 154938410 154938903 -11711393 - MLT1N2 LTR MaLR -17 545 42 6 1767 274 314 80 72 chrX 154939190 154939427 -11710869 + Lx8 LINE L1 7230 7468 -5 6 1767 504 368 41 20 chrX 154939512 154939756 -11710540 + MLT1H LTR MaLR 10 258 -291 6 1767 2500 198 92 3 chrX 154940110 154940687 -11709609 + Lx9 LINE L1 7009 7636 -8 6 1767 394 339 17 9 chrX 154940810 154940926 -11709370 - PB1D10 SINE Alu 0 117 1 6 1767 207 125 0 0 chrX 154941369 154941409 -11708887 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1767 1775 76 41 15 chrX 154941450 154941717 -11708579 + L1_Mus3 LINE L1 6365 6638 0 6 1767 271 392 57 14 chrX 154943098 154943310 -11706986 - LTR16C LTR ERVL 0 489 269 6 1767 200 163 0 23 chrX 154943640 154943684 -11706612 + CT-rich Low_complexity Low_complexity 2 44 0 6 1767 495 48 0 0 chrX 154943678 154943740 -11706556 + (TC)n Simple_repeat Simple_repeat 1 62 0 6 1767 4807 142 28 16 chrX 154943740 154944549 -11705747 - Lx2 LINE L1 -3 6994 6176 6 1767 190 286 141 13 chrX 154945041 154945119 -11705177 - MER5B DNA MER1_type -90 88 1 6 1767 515 307 149 10 chrX 154945390 154945591 -11704705 + MLT1H LTR MaLR 6 234 -315 6 1767 273 231 106 16 chrX 154945593 154945716 -11704580 - Lx7 LINE L1 0 7696 7563 6 1767 897 249 114 23 chrX 154945728 154946036 -11704260 - Lx7 LINE L1 -266 7430 7095 6 1767 25 65 0 0 chrX 154947108 154947154 -11703142 + AT_rich Low_complexity Low_complexity 1 46 0 6 1767 303 241 119 17 chrX 154947200 154947318 -11702978 + Tigger5 DNA MER2_type 1 130 -2276 6 1767 34 24 0 0 chrX 154947321 154947362 -11702934 + AT_rich Low_complexity Low_complexity 1 41 0 6 1767 683 196 196 0 chrX 154947572 154947745 -11702551 - B3 SINE B2 -9 207 1 6 1767 549 0 0 0 chrX 154948427 154948488 -11701808 + (TTTTG)n Simple_repeat Simple_repeat 2 62 0 6 1767 245 67 83 0 chrX 154948889 154948949 -11701347 + (TTTTTG)n Simple_repeat Simple_repeat 1 65 0 6 1767 7541 80 9 4 chrX 154948956 154950191 -11700105 - L1Md_F2 LINE L1 0 6582 5338 6 1767 14550 87 2 7 chrX 154950183 154952929 -11697367 - L1Md_F2 LINE L1 -2512 3371 639 6 1767 483 139 151 0 chrX 154952925 154953011 -11697285 - L1Md_F2 LINE L1 -6131 507 409 6 1767 25 0 0 0 chrX 154953120 154953145 -11697151 + AT_rich Low_complexity Low_complexity 1 25 0 6 1767 1071 237 0 9 chrX 154953156 154953373 -11696923 + B3 SINE B2 1 215 -1 6 1767 4284 130 37 19 chrX 154953416 154954140 -11696156 - Lx2B LINE L1 -4 6996 6260 6 1767 4098 155 16 0 chrX 154954140 154954984 -11695312 + Lx2 LINE L1 5412 6265 -732 6 1767 7890 55 5 1 chrX 154955058 154956442 -11693854 - L1Md_F2 LINE L1 -13 6569 5183 6 1767 6362 203 41 39 chrX 154956442 154958104 -11692192 - Lx6 LINE L1 -344 7116 5430 6 1767 21 57 0 0 chrX 154958574 154958609 -11691687 + AT_rich Low_complexity Low_complexity 1 35 0 6 1767 4192 139 19 22 chrX 154959467 154960193 -11690103 - RMER6A LTR ERVK -32 724 1 6 1767 235 240 22 34 chrX 154960323 154960413 -11689883 + MLT1G LTR MaLR 492 588 -3 6 1767 633 346 100 57 chrX 154960417 154961051 -11689245 + MLT1G-int LTR MaLR 1 713 -696 6 1767 526 130 5 5 chrX 154961104 154961192 -11689104 - B1_Mus2 SINE Alu -75 72 3 6 1767 348 218 43 75 chrX 154961122 154961216 -11689080 - MT2B LTR ERVL -372 229 139 6 1767 231 36 0 0 chrX 154961314 154961342 -11688954 + (GA)n Simple_repeat Simple_repeat 1 28 0 6 1767 4007 53 0 12 chrX 154961746 154962256 -11688040 + L1Md_F2 LINE L1 5083 5586 -297 6 1767 8086 44 4 1 chrX 154962256 154963247 -11687049 + L1Md_F2 LINE L1 5587 6580 -2 6 1767 406 251 67 0 chrX 154963786 154963965 -11686331 + L1MA8 LINE L1 3066 3256 -2884 6 1767 244 161 0 0 chrX 154963987 154964043 -11686253 + L1MA8 LINE L1 3416 3471 -2669 6 1767 5772 202 64 17 chrX 154964114 154965280 -11685016 - Lx6 LINE L1 -7 7453 6233 6 1767 2796 271 89 25 chrX 154965283 154965893 -11684403 + L1MA8 LINE L1 3587 4245 -1898 6 1767 285 29 0 0 chrX 154965893 154965927 -11684369 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1767 2796 271 89 25 chrX 154965927 154966539 -11683757 + L1MA8 LINE L1 4246 4888 -1255 6 1767 400 291 39 44 chrX 154966553 154966575 -11683721 - CYRA11_Mm Unknown Y-chromosome -267 350 272 6 1767 870 149 13 31 chrX 154966575 154966635 -11683661 + URR1A DNA MER1_type 71 130 -96 6 1767 4047 128 71 6 chrX 154966635 154967285 -11683011 + RLTR17 LTR ERVK 1 692 0 6 1767 400 291 39 44 chrX 154967285 154967382 -11682914 - CYRA11_Mm Unknown Y-chromosome -346 271 172 6 1767 1311 284 128 20 chrX 154967383 154968169 -11682127 + L1MA8 LINE L1 5169 6037 -254 6 1767 378 333 72 79 chrX 154968220 154968624 -11681672 + L1MEf LINE L1 656 1056 -5367 6 1767 1856 261 56 10 chrX 154968601 154969082 -11681214 + Lx6 LINE L1 6958 7460 0 6 1767 287 284 125 72 chrX 154969183 154969600 -11680696 + L1MEf LINE L1 1094 1532 -4891 6 1767 307 323 39 37 chrX 154969619 154970055 -11680241 + L1MEf LINE L1 1740 2200 -4837 6 1767 1415 169 17 80 chrX 154970055 154970116 -11680180 - ORR1A3 LTR MaLR 0 326 282 6 1767 942 128 21 0 chrX 154970116 154970257 -11680039 - B1_Mus1 SINE Alu -3 145 2 6 1767 1415 183 23 92 chrX 154970257 154970563 -11679733 - ORR1A3 LTR MaLR -45 339 44 6 1767 2243 60 62 7 chrX 154970563 154970867 -11679429 - L1Md_F2 LINE L1 -3 6579 6259 6 1767 1077 233 45 137 chrX 154970867 154970921 -11679375 - ORR1A3 LTR MaLR -332 52 1 6 1767 493 295 68 39 chrX 154970950 154971257 -11679039 + L1MEf LINE L1 2204 2519 -4518 6 1767 234 0 0 0 chrX 154971837 154971863 -11678433 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 1767 385 311 9 0 chrX 154972275 154972381 -11677915 - PB1D10 SINE Alu -10 107 1 6 1767 615 332 78 63 chrX 154972476 154972810 -11677486 - MLT1A0 LTR MaLR 0 365 27 6 1767 1012 340 102 22 chrX 154972893 154973356 -11676940 - MER68 LTR ERVL -25 538 39 6 1767 22 0 0 0 chrX 154973683 154973705 -11676591 + AT_rich Low_complexity Low_complexity 1 22 0 6 1767 192 390 41 62 chrX 154974038 154974183 -11676113 + MIR3 SINE MIR 1 142 -66 6 1767 962 61 8 0 chrX 154975530 154975661 -11674635 - B1_Mus1 SINE Alu -2 146 15 6 1767 310 310 136 17 chrX 154976322 154976440 -11673856 + MLT1J2 LTR MaLR 18 149 -299 6 1767 502 145 18 61 chrX 154976486 154976600 -11673696 + RMER6A LTR ERVK 1 198 -522 6 1767 9861 126 62 75 chrX 154976600 154977867 -11672429 + RMER6-int LTR ERVK 1285 2569 -608 6 1767 253 222 0 0 chrX 154977867 154977921 -11672375 + LSU-rRNA_Hsa rRNA rRNA 1777 1830 -3205 6 1767 9861 126 62 75 chrX 154977921 154978057 -11672239 + RMER6-int LTR ERVK 2570 2708 -469 6 1767 4937 66 0 0 chrX 154978057 154978680 -11671616 - L1_Mus1 LINE L1 0 6567 5945 6 1767 9861 126 62 75 chrX 154978680 154979141 -11671155 + RMER6-int LTR ERVK 2709 3177 0 6 1767 2806 171 22 93 chrX 154979141 154979873 -11670423 + RMER6A LTR ERVK 1 753 -3 6 1767 522 224 50 33 chrX 154980074 154980194 -11670102 + MER20 DNA MER1_type 63 184 -35 6 1767 357 304 35 18 chrX 154980443 154980557 -11669739 + L2a LINE L2 3309 3424 -2 7 1767 731 301 0 5 chrX 154980742 154980959 -11669337 + B3 SINE B2 1 216 0 7 1767 259 333 80 37 chrX 154981323 154981485 -11668811 - MLT1H LTR MaLR -266 283 115 7 1767 307 286 99 73 chrX 154982398 154982549 -11667747 + HAL1-3A_ME LINE L1 2285 2439 -419 7 1767 441 267 48 0 chrX 154982701 154982806 -11667490 + PB1D7 SINE Alu 1 110 -10 7 1767 656 56 11 0 chrX 154983049 154983138 -11667158 + (TTTTC)n Simple_repeat Simple_repeat 4 93 0 7 1767 321 26 0 0 chrX 154983140 154983178 -11667118 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 7 1767 4097 77 4 0 chrX 154983184 154983731 -11666565 - L1_Mus1 LINE L1 0 6567 6019 7 1767 686 307 43 78 chrX 154984008 154984446 -11665850 + RMER10A LTR ERVL 1 423 -19 7 1767 917 231 136 7 chrX 154984973 154985252 -11665044 - Lx8 LINE L1 -4 7469 7155 7 1767 842 290 105 51 chrX 154985416 154985541 -11664755 + RMER15 LTR ERVL 246 382 -193 7 1767 567 0 0 0 chrX 154985541 154985604 -11664692 + (ATGGTG)n Simple_repeat Simple_repeat 3 65 0 7 1767 842 290 105 51 chrX 154985604 154985791 -11664505 + RMER15 LTR ERVL 383 574 -1 7 1767 806 312 58 9 chrX 154985791 154986121 -11664175 - Lx8 LINE L1 -314 7159 6814 7 1767 1019 276 98 12 chrX 154986195 154986522 -11663774 - Lx8 LINE L1 -1061 6412 6058 7 1767 246 307 115 19 chrX 154987262 154987418 -11662878 - HAL1 LINE L1 -400 2107 1937 7 1767 228 330 48 87 chrX 154987430 154987659 -11662637 - HAL1 LINE L1 -1767 740 521 7 1767 572 257 0 20 chrX 154987829 154987980 -11662316 + Lx9 LINE L1 7143 7290 -354 7 1767 441 205 0 0 chrX 154988004 154988131 -11662165 + (TA)n Simple_repeat Simple_repeat 1 127 0 7 1767 27859 108 5 45 chrX 154988233 154991336 -11658960 - L1_Mus2 LINE L1 0 6566 3482 7 1767 5711 93 8 1 chrX 154991336 154992123 -11658173 - L1_Mus2 LINE L1 -4 6562 5771 7 1767 27859 122 6 65 chrX 154992123 154992694 -11657602 - L1_Mus2 LINE L1 -2402 3481 3176 7 1767 1287 84 0 0 chrX 154992694 154992872 -11657424 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 7 1767 468 0 0 0 chrX 154992872 154992924 -11657372 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 7 1767 27859 122 6 65 chrX 154992924 154994436 -11655860 - L1_Mus2 LINE L1 -2708 3175 1671 7 1767 5333 36 0 0 chrX 154994436 154995069 -11655227 - L1Md_T LINE L1 -2 6580 5948 7 1767 27859 112 2 50 chrX 154995069 154996344 -11653952 - L1_Mus2 LINE L1 -4213 1670 437 7 1767 406 353 123 45 chrX 154996539 154996913 -11653383 - L1MEd LINE L1 -5113 1006 604 7 1767 1169 318 65 48 chrX 154997289 154997831 -11652465 + Lx8 LINE L1 6384 6934 -539 7 1767 5126 90 0 15 chrX 154998401 154998421 -11651875 + L1_Mus2 LINE L1 5175 5194 -689 7 1767 1248 104 40 0 chrX 154998421 154998594 -11651702 - B2_Mm2 SINE B2 -14 181 2 7 1767 7100 88 5 5 chrX 154998594 154999969 -11650327 + L1_Mus2 LINE L1 5195 6565 -1 7 1767 23 0 0 0 chrX 155000108 155000131 -11650165 + AT_rich Low_complexity Low_complexity 1 23 0 1 1767 500 282 38 8 chrX 155000416 155000548 -11649748 + B1F1 SINE Alu 6 141 -8 2 1767 812 272 74 0 chrX 155000687 155000889 -11649407 + Lx8 LINE L1 7115 7331 -142 3 1767 259 250 0 0 chrX 155001209 155001257 -11649039 + ID SINE ID 18 65 -159 4 1767 253 279 0 105 chrX 155001214 155001290 -11649006 + BC1_Mm scRNA scRNA 22 89 -63 5 1767 41271 4 0 0 chrX 155001939 155008518 -11641778 - L1Md_A LINE L1 0 6582 4 6 1767 207 0 0 0 chrX 155008536 155008559 -11641737 + (TC)n Simple_repeat Simple_repeat 1 23 0 7 1767 396 0 0 0 chrX 155008559 155008602 -11641694 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 1767 225 341 47 12 chrX 155008779 155008865 -11641431 - MIRc SINE MIR -130 138 50 9 1767 203 288 37 24 chrX 155008862 155008944 -11641352 + MIRb SINE MIR 186 268 0 1 1767 886 94 0 21 chrX 155009816 155009957 -11640339 + L1Md_F2 LINE L1 6436 6573 -9 1 1767 241 153 208 0 chrX 155009981 155010053 -11640243 - L1MA10 LINE L1 -13 6321 6235 1 1767 711 309 6 6 chrX 155010075 155010254 -11640042 - ID_B1 SINE B4 0 224 46 1 1767 319 326 58 29 chrX 155010399 155010538 -11639758 - L2b LINE L2 0 3375 3233 1 1767 712 185 282 70 chrX 155011674 155012001 -11638295 + Lx4B LINE L1 6663 7058 0 1 1767 24 0 0 0 chrX 155012002 155012026 -11638270 + AT_rich Low_complexity Low_complexity 1 24 0 1 1767 9100 53 4 2 chrX 155012080 155013921 -11636375 - L1Md_F2 LINE L1 -15 6567 4724 1 1767 21 0 0 0 chrX 155014275 155014296 -11636000 + AT_rich Low_complexity Low_complexity 1 21 0 1 1767 2563 166 50 11 chrX 155014611 155015225 -11635071 - L1_Mus4 LINE L1 -50 7008 6083 1 1767 1221 93 111 19 chrX 155015225 155015433 -11634863 + L1_Mus3 LINE L1 6406 6632 -6 2 1767 351 0 0 0 chrX 155016478 155016517 -11633779 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 2 1767 381 43 0 0 chrX 155016523 155016570 -11633726 + (GGGA)n Simple_repeat Simple_repeat 3 49 0 2 1767 260 259 165 0 chrX 155016677 155016762 -11633534 + MER20 DNA MER1_type 1 99 -120 2 1767 28 29 0 0 chrX 155017233 155017268 -11633028 + AT_rich Low_complexity Low_complexity 1 35 0 2 1767 285 341 0 22 chrX 155018084 155018174 -11632122 - MamSINE1 SINE tRNA -7 283 196 2 1767 413 228 0 0 chrX 155018175 155018254 -11632042 + ID4_ SINE ID 3 81 -2 2 1767 230 316 39 97 chrX 155018551 155018705 -11631591 - MIRc SINE MIR -123 145 1 2 1767 5543 204 65 16 chrX 155019146 155020785 -11629511 + Lx7 LINE L1 5389 7118 -578 2 1767 216 0 0 0 chrX 155021031 155021055 -11629241 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1767 273 259 0 0 chrX 155021591 155021645 -11628651 + B4A SINE B4 88 141 -151 3 1767 518 257 0 0 chrX 155021599 155021700 -11628596 + PB1D10 SINE Alu 11 111 -6 3 1767 615 27 0 0 chrX 155021702 155021775 -11628521 + (GAAA)n Simple_repeat Simple_repeat 3 75 0 3 1767 414 0 0 0 chrX 155021879 155021925 -11628371 + (A)n Simple_repeat Simple_repeat 1 46 0 3 1767 8565 142 4 6 chrX 155022222 155023645 -11626651 + L1_Mur2 LINE L1 3768 5187 -690 3 1767 2051 191 103 5 chrX 155023634 155024050 -11626246 - Lx9 LINE L1 -833 6811 6355 3 1767 912 197 39 65 chrX 155024048 155024357 -11625939 + Lx9 LINE L1 7343 7643 -1 3 1767 2229 177 100 7 chrX 155024421 155024882 -11625414 + RMER5 LTR ERV1 5 508 -26 3 1767 480 261 67 43 chrX 155024896 155025104 -11625192 - L1M3 LINE L1 -357 5814 5602 3 1767 7687 156 13 6 chrX 155025118 155026712 -11623584 - Lx3C LINE L1 -2 6974 5371 3 1767 271 218 46 0 chrX 155026734 155026821 -11623475 - MER20B DNA MER1_type -33 750 660 4 1767 1319 267 64 3 chrX 155027004 155027395 -11622901 + L1MC1 LINE L1 5912 6326 -7 4 1767 315 0 0 0 chrX 155027547 155027582 -11622714 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 4 1767 585 169 11 84 chrX 155027862 155028149 -11622147 + (TAGA)n Simple_repeat Simple_repeat 1 265 0 4 1767 631 298 126 21 chrX 155028190 155028612 -11621684 - L1MC4 LINE L1 -197 7845 7380 4 1767 23 0 0 0 chrX 155030201 155030224 -11620072 + AT_rich Low_complexity Low_complexity 1 23 0 4 1767 713 266 0 0 chrX 155030629 155030768 -11619528 - ID_B1 SINE B4 -12 212 74 4 1767 198 354 70 74 chrX 155030866 155031122 -11619174 - L2c LINE L2 0 3387 3133 4 1767 451 255 0 0 chrX 155032179 155032273 -11618023 + B1_Mur4 SINE Alu 37 130 -20 4 1767 25 31 0 0 chrX 155032418 155032450 -11617846 + AT_rich Low_complexity Low_complexity 1 32 0 4 1767 26 50 0 0 chrX 155032830 155032870 -11617426 + AT_rich Low_complexity Low_complexity 1 40 0 5 1767 1215 298 30 18 chrX 155032894 155032966 -11617330 + L1MC4a LINE L1 7289 7367 -515 5 1767 402 21 0 0 chrX 155032966 155033013 -11617283 + (TTA)n Simple_repeat Simple_repeat 3 49 0 5 1767 1215 298 30 18 chrX 155033013 155033443 -11616853 + L1MC4a LINE L1 7368 7797 -85 5 1767 701 261 225 54 chrX 155033445 155033761 -11616535 + MLT1A1 LTR MaLR 1 370 -38 5 1767 1246 179 37 0 chrX 155033868 155034086 -11616210 - MTC LTR MaLR -128 293 68 5 1767 2122 192 40 36 chrX 155034266 155034737 -11615559 - Lx4B LINE L1 -4 7054 6582 5 1767 474 220 0 1 chrX 155034737 155034828 -11615468 - MTC LTR MaLR -306 90 1 5 1767 391 270 84 13 chrX 155035049 155035203 -11615093 + Lx6 LINE L1 7288 7452 -8 5 1767 390 162 0 0 chrX 155036161 155036235 -11614061 + CT-rich Low_complexity Low_complexity 3 76 0 5 1767 484 254 180 0 chrX 155036412 155036534 -11613762 + RSINE1 SINE B4 16 159 -6 5 1767 894 247 62 20 chrX 155036563 155036908 -11613388 + L1MB8 LINE L1 5279 5646 -528 5 1767 1176 55 0 7 chrX 155037457 155037604 -11612692 + B1_Mm SINE Alu 1 146 -1 6 1767 905 186 117 0 chrX 155037624 155037812 -11612484 + B3 SINE B2 1 210 -6 6 1767 813 282 153 33 chrX 155037826 155038193 -11612103 - Lx8 LINE L1 -1 7472 7062 6 1767 1530 149 98 0 chrX 155038234 155038550 -11611746 - Lx9 LINE L1 -6 7638 7292 6 1767 35305 36 0 0 chrX 155038739 155044210 -11606086 + L1Md_T LINE L1 22 5589 -297 6 1767 8946 7 0 0 chrX 155044210 155045206 -11605090 + L1Md_T LINE L1 5590 6585 0 6 1767 7548 102 12 0 chrX 155045268 155046527 -11603769 - L1_Mus4 LINE L1 -1 6635 5363 6 1767 897 10 0 0 chrX 155046527 155046629 -11603667 + (TTC)n Simple_repeat Simple_repeat 2 103 0 6 1767 7567 85 6 3 chrX 155046698 155048269 -11602027 - L1_Mus2 LINE L1 0 6566 4990 6 1767 529 301 35 35 chrX 155048751 155048998 -11601298 + L1MB8 LINE L1 5674 5921 -257 5 1767 579 29 0 0 chrX 155048998 155049067 -11601229 + (TA)n Simple_repeat Simple_repeat 2 70 0 6 1767 529 301 35 35 chrX 155049067 155049101 -11601195 + L1MB8 LINE L1 5922 5955 -223 5 1767 746 237 26 0 chrX 155049715 155049867 -11600429 - ORR1B1 LTR MaLR 0 394 239 6 1767 1363 222 20 14 chrX 155049831 155050123 -11600173 + MTD LTR MaLR 126 419 0 7 1767 405 0 0 0 chrX 155050253 155050298 -11599998 + (CTATT)n Simple_repeat Simple_repeat 2 46 0 7 1767 219 69 0 0 chrX 155051067 155051096 -11599200 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1767 207 220 20 20 chrX 155051709 155051760 -11598536 - MIRm SINE MIR -3 273 223 7 1767 513 0 0 0 chrX 155052949 155053006 -11597290 + (TA)n Simple_repeat Simple_repeat 1 57 0 7 1767 611 371 77 51 chrX 155053724 155054099 -11596197 - LTR16C LTR ERVL -34 455 71 7 1767 3633 272 64 81 chrX 155054552 155055585 -11594711 - Lx8 LINE L1 -2 7471 6494 7 1767 4317 114 35 6 chrX 155055585 155056238 -11594058 + Lx2 LINE L1 6326 6997 0 7 1767 3633 272 64 81 chrX 155056238 155056509 -11593787 - Lx8 LINE L1 -980 6493 6197 7 1767 1044 224 9 9 chrX 155056509 155056725 -11593571 - B3 SINE B2 0 216 1 7 1767 2049 254 80 36 chrX 155056725 155056881 -11593415 - Lx8 LINE L1 -1277 6196 6034 7 1767 381 338 59 11 chrX 155056964 155057109 -11593187 - B3A SINE B2 -48 168 6 7 1767 896 183 171 0 chrX 155057401 155057652 -11592644 + Lx9 LINE L1 7350 7643 -1 8 1767 29 28 0 0 chrX 155057652 155057688 -11592608 + AT_rich Low_complexity Low_complexity 1 36 0 8 1767 234 289 0 0 chrX 155057699 155057789 -11592507 - Lx8 LINE L1 -12 5835 5746 7 1767 573 264 16 0 chrX 155057805 155057930 -11592366 - B3 SINE B2 -5 211 85 8 220 754 195 121 22 chrX 155057933 155058198 -11592098 + Lx4B LINE L1 6696 7050 -8 8 1768 386 194 0 0 chrX 155058214 155058281 -11592015 - B3 SINE B2 -149 67 1 8 1768 509 220 18 9 chrX 155058296 155058406 -11591890 - MIR SINE MIR -57 205 95 8 1768 1089 199 126 16 chrX 155058480 155058735 -11591561 + Lx5 LINE L1 6765 7047 -3 8 1768 359 238 147 23 chrX 155059415 155059544 -11590752 + B1F1 SINE Alu 5 149 0 8 1768 981 304 92 24 chrX 155059781 155060357 -11589939 + L1MC4 LINE L1 6703 7317 -725 8 1768 261 296 54 27 chrX 155060408 155060519 -11589777 + MIR SINE MIR 136 249 -13 8 1768 519 309 74 6 chrX 155062430 155062606 -11587690 + B3A SINE B2 1 188 -10 8 1768 3516 35 48 0 chrX 155062661 155063096 -11587200 - L1Md_F3 LINE L1 -2 6582 6127 9 1768 992 302 151 9 chrX 155063625 155064263 -11586033 - L1MEg LINE L1 -4935 1149 422 9 1768 3085 86 2 7 chrX 155064350 155064830 -11585466 + L1Md_F2 LINE L1 6152 6582 0 9 1768 705 290 108 91 chrX 155065566 155065919 -11584377 - ORR1E LTR MaLR 0 359 1 9 1768 216 0 0 0 chrX 155066154 155066178 -11584118 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 9 1768 691 238 16 157 chrX 155066183 155066432 -11583864 - B3 SINE B2 -2 214 1 9 1768 232 357 24 0 chrX 155066486 155066570 -11583726 + L1MC LINE L1 5485 5570 -2312 9 1768 1458 249 34 19 chrX 155067089 155067502 -11582794 + MTD LTR MaLR 1 419 0 9 1768 459 0 0 0 chrX 155068131 155068182 -11582114 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 1768 1395 140 77 7 chrX 155069104 155069378 -11580918 + Lx2B LINE L1 5903 6195 -805 9 1768 758 248 91 12 chrX 155070767 155071082 -11579214 - L1ME2 LINE L1 -1 6163 5807 1 1768 392 333 83 66 chrX 155071256 155071558 -11578738 - L1ME2 LINE L1 -751 5395 5089 1 1768 649 278 0 14 chrX 155071584 155071730 -11578566 - B1_Mur1 SINE Alu 0 149 6 1 1768 1853 299 101 47 chrX 155071736 155071821 -11578475 - Lx8 LINE L1 -28 7445 7350 1 1768 186 103 0 0 chrX 155071821 155071850 -11578446 + (CAT)n Simple_repeat Simple_repeat 3 31 0 1 1768 1853 299 101 47 chrX 155071850 155072392 -11577904 - Lx8 LINE L1 -124 7349 6774 1 1768 1851 169 44 42 chrX 155072392 155072775 -11577521 + ORR1C2 LTR MaLR 1 384 0 1 1768 1853 299 101 47 chrX 155072775 155072798 -11577498 - Lx8 LINE L1 -700 6773 6756 1 1768 1035 152 0 0 chrX 155072798 155072976 -11577320 + GA-rich Low_complexity Low_complexity 2 179 0 1 1768 756 107 0 0 chrX 155072976 155073087 -11577209 + (GGAA)n Simple_repeat Simple_repeat 1 112 0 1 1768 1853 299 101 47 chrX 155073087 155073345 -11576951 - Lx8 LINE L1 -718 6755 6487 1 1768 1101 254 73 12 chrX 155073358 155073711 -11576585 + Lx8 LINE L1 5509 5914 -1559 1 1768 414 0 0 0 chrX 155073895 155073941 -11576355 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1768 434 349 51 17 chrX 155074048 155074342 -11575954 - L1ME2 LINE L1 -1355 4791 4488 1 1768 457 295 86 18 chrX 155074387 155074895 -11575401 - L1ME2 LINE L1 -1737 4409 3846 1 1768 1527 21 0 10 chrX 155074912 155075104 -11575192 + L1Md_F2 LINE L1 6393 6582 0 1 1768 1158 75 0 0 chrX 155075210 155075357 -11574939 + B1_Mus1 SINE Alu 2 148 0 1 1768 275 149 52 39 chrX 155075484 155075561 -11574735 - Lx7 LINE L1 -3 7693 7616 1 1768 309 89 0 0 chrX 155075617 155075662 -11574634 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1768 647 245 7 13 chrX 155075720 155075869 -11574427 - Lx7 LINE L1 -350 7346 7199 1 1768 2087 175 34 67 chrX 155076231 155076866 -11573430 - Lx4A LINE L1 0 7058 6470 1 1768 422 250 57 19 chrX 155076953 155077059 -11573237 + PB1D7 SINE Alu 2 111 -9 1 1768 3317 57 5 2 chrX 155079228 155079653 -11570643 + L1Md_F2 LINE L1 6156 6581 -1 1 1768 663 296 53 48 chrX 155079667 155080043 -11570253 - L1MEg LINE L1 -5219 865 488 1 1768 233 206 17 0 chrX 155081432 155081500 -11568796 + Lx7 LINE L1 7613 7669 -27 1 1768 339 186 330 38 chrX 155081525 155081631 -11568665 + B1F SINE Alu 3 139 -10 1 1768 183 205 0 0 chrX 155081817 155081856 -11568440 + (CATATA)n Simple_repeat Simple_repeat 3 41 0 1 1768 910 298 68 60 chrX 155081875 155082490 -11567806 - L1ME1 LINE L1 -2 6177 5558 1 1768 988 256 142 6 chrX 155082699 155083052 -11567244 + Lx9 LINE L1 6955 7355 -289 1 1768 40 59 0 0 chrX 155083306 155083374 -11566922 + AT_rich Low_complexity Low_complexity 1 68 0 1 1768 231 36 0 0 chrX 155083374 155083402 -11566894 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1 1768 203 398 92 12 chrX 155083527 155083700 -11566596 - MIR SINE MIR -46 216 30 1 1768 813 151 0 23 chrX 155083929 155084058 -11566238 + B1_Mur2 SINE Alu 24 149 0 1 1768 704 280 103 51 chrX 155084223 155084757 -11565539 + L1ME3A LINE L1 5612 6173 0 1 1768 1699 179 124 11 chrX 155084957 155085335 -11564961 + MTC LTR MaLR 1 421 0 1 1768 968 129 0 0 chrX 155086014 155086161 -11564135 - URR1A DNA MER1_type 0 226 80 1 1768 429 318 23 0 chrX 155086254 155086383 -11563913 + MER5A1 DNA MER1_type 2 133 -33 1 1768 250 337 61 114 chrX 155086687 155086915 -11563381 + MER101B LTR ERV1 355 570 0 1 1768 408 316 108 75 chrX 155087423 155087520 -11562776 + HAL1 LINE L1 797 883 -1624 1 1768 1777 212 21 29 chrX 155087520 155087938 -11562358 - MTD LTR MaLR 0 419 5 1 1768 408 316 108 75 chrX 155087938 155088202 -11562094 + HAL1 LINE L1 884 1170 -1337 1 1768 420 293 135 48 chrX 155088259 155088571 -11561725 + HAL1 LINE L1 1268 1606 -901 1 1768 348 365 96 34 chrX 155088681 155089035 -11561261 + HAL1 LINE L1 1749 2124 -383 1 1768 764 277 76 96 chrX 155089042 155089372 -11560924 - ORR1E LTR MaLR -1 378 35 1 1768 768 166 155 94 chrX 155089372 155089585 -11560711 - URR1A DNA MER1_type 0 226 1 1 1768 764 277 79 97 chrX 155089585 155089613 -11560683 - ORR1E LTR MaLR -325 34 7 1 1768 462 233 144 0 chrX 155089599 155089745 -11560551 - MTE-int LTR MaLR -34 1546 1380 1 1768 243 323 29 39 chrX 155090834 155090937 -11559359 + LTR16C LTR ERVL 6 107 -382 1 1768 2571 187 28 100 chrX 155091171 155091790 -11558506 + RMER15 LTR ERVL 2 575 0 1 1768 914 210 34 6 chrX 155092167 155092352 -11557944 - ORR1D2 LTR MaLR -4 366 128 1 1768 207 0 0 0 chrX 155092352 155092375 -11557921 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1768 432 0 0 0 chrX 155092375 155092422 -11557874 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 1768 296 306 122 57 chrX 155092422 155092464 -11557832 - ORR1D2 LTR MaLR -202 127 85 1 1768 2224 244 82 72 chrX 155092464 155093064 -11557232 + RMER19B LTR ERVK 1 606 -296 1 1768 1015 243 48 0 chrX 155093075 155093285 -11557011 + RMER19B LTR ERVK 672 891 -11 1 1768 516 296 30 0 chrX 155093294 155093426 -11556870 - ORR1D2 LTR MaLR -233 137 2 1 1768 333 323 162 83 chrX 155094135 155094530 -11555766 - L2c LINE L2 -2 3385 2960 1 1768 283 393 84 17 chrX 155094679 155094917 -11555379 - L2c LINE L2 -509 2910 2657 1 1768 410 0 20 0 chrX 155095313 155095363 -11554933 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 1768 506 293 45 9 chrX 155096147 155096400 -11553896 - L1M3 LINE L1 -814 5066 4796 1 1768 1893 282 106 26 chrX 155096414 155097351 -11552945 - L1_Mur3 LINE L1 -897 4983 3972 1 1768 13456 113 19 5 chrX 155097361 155100262 -11550034 - L1_Mus3 LINE L1 -8 6630 3688 1 1768 4014 98 11 13 chrX 155100277 155100888 -11549408 - MusHAL1 LINE L1 -1375 1337 728 1 1768 1549 273 44 44 chrX 155100886 155101450 -11548846 - L1VL4 LINE L1 -5602 700 137 1 1768 726 273 30 73 chrX 155101492 155101730 -11548566 - L1_Mur3 LINE L1 -1916 3964 3733 1 1768 1280 258 19 45 chrX 155101730 155102108 -11548188 - ORR1D2 LTR MaLR -2 368 1 1 1768 726 273 30 73 chrX 155102108 155102197 -11548099 - L1_Mur3 LINE L1 -2148 3732 3651 1 1768 1171 292 28 44 chrX 155102190 155102552 -11547744 + Lx8 LINE L1 6460 6815 -658 1 1768 990 260 93 11 chrX 155102554 155102822 -11547474 + Lx8 LINE L1 6939 7228 -245 1 1768 261 359 0 0 chrX 155102827 155102919 -11547377 + RMER15 LTR ERVL 371 462 -113 1 1768 405 0 0 0 chrX 155103021 155103066 -11547230 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 1768 349 222 107 38 chrX 155103135 155103266 -11547030 + Lx9 LINE L1 7503 7642 -2 1 1768 234 323 27 116 chrX 155104179 155104326 -11545970 + L2 LINE L2 1950 2083 -1336 1 1768 483 147 0 0 chrX 155104594 155104710 -11545586 + (CTA)n Simple_repeat Simple_repeat 3 118 0 1 1768 637 273 0 0 chrX 155104966 155105105 -11545191 - B1F SINE Alu -10 139 1 1 1768 260 386 105 15 chrX 155105176 155105376 -11544920 + L2 LINE L2 2643 2860 -559 1 1768 740 294 172 16 chrX 155105449 155105884 -11544412 + MLT1D LTR MaLR 3 505 0 1 1768 488 330 8 37 chrX 155106321 155106482 -11543814 - MER63A DNA AcHobo -43 167 26 1 1768 2496 255 134 23 chrX 155106635 155107005 -11543291 - Lx8 LINE L1 0 7473 7053 1 1768 2564 81 0 42 chrX 155107005 155107391 -11542905 - L1Md_F2 LINE L1 0 6582 6213 1 1768 2496 255 134 23 chrX 155107391 155107798 -11542498 - Lx8 LINE L1 -421 7052 6610 1 1768 1791 92 0 68 chrX 155107846 155108138 -11542158 - L1Md_F2 LINE L1 -12 6570 6299 1 1768 873 236 37 0 chrX 155109136 155109327 -11540969 + B3 SINE B2 2 199 -17 1 1768 1310 302 89 13 chrX 155109369 155110074 -11540222 + L1MA5 LINE L1 5520 6278 -22 1 1768 350 328 48 8 chrX 155110417 155110543 -11539753 - LTR88b LTR Gypsy? -37 800 670 1 1768 1254 265 129 12 chrX 155111064 155111561 -11538735 + Charlie5 DNA MER1_type 175 729 -1895 1 1768 437 281 0 0 chrX 155111569 155111665 -11538631 + PB1D10 SINE Alu 1 96 -21 1 1768 273 162 73 0 chrX 155111715 155111783 -11538513 + Lx9 LINE L1 7570 7642 -2 1 1768 180 0 0 0 chrX 155112128 155112148 -11538148 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1 1768 3985 123 21 18 chrX 155112148 155112776 -11537520 - Lx LINE L1 -11 6643 6014 1 1768 1350 48 59 0 chrX 155112776 155112962 -11537334 + L1_Mus4 LINE L1 5784 5980 -656 1 1768 3393 202 57 22 chrX 155113279 155114150 -11536146 + Charlie5 DNA MER1_type 895 1796 -828 1 1768 1005 254 43 45 chrX 155114160 155114605 -11535691 - L1MB8 LINE L1 -8 6170 5727 1 1768 282 173 110 110 chrX 155114611 155114702 -11535594 - MTD LTR MaLR 0 419 329 1 1768 281 270 22 22 chrX 155114836 155114927 -11535369 + ORR1D2-int LTR MaLR 47 137 -1233 1 1768 3013 15 0 0 chrX 155114927 155115264 -11535032 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1768 54485 14 12 0 chrX 155115264 155121659 -11528637 + IAPEz-int LTR ERVK 8 6481 0 1 1768 3013 15 0 0 chrX 155121659 155121996 -11528300 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1768 4538 242 67 36 chrX 155121996 155123037 -11527259 + ORR1D2-int LTR MaLR 132 1180 -190 1 1768 546 16 0 0 chrX 155123037 155123100 -11527196 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 1768 4538 242 67 36 chrX 155123100 155123259 -11527037 + ORR1D2-int LTR MaLR 1181 1370 0 1 1768 630 287 98 67 chrX 155123259 155123453 -11526843 + ORR1D2 LTR MaLR 1 200 -159 1 1768 35507 23 0 7 chrX 155123453 155128409 -11521887 + L1Md_A LINE L1 672 5586 -297 1 1768 8310 40 0 0 chrX 155128409 155129405 -11520891 + L1Md_A LINE L1 5587 6582 0 1 1768 517 298 35 64 chrX 155129405 155129577 -11520719 + ORR1D2 LTR MaLR 138 304 -66 1 1768 1602 241 148 11 chrX 155129597 155130210 -11520086 + Charlie5 DNA MER1_type 1858 2554 -70 1 1768 249 139 0 0 chrX 155130781 155130824 -11519472 + (TATG)n Simple_repeat Simple_repeat 4 46 0 1 1768 241 264 70 31 chrX 155130866 155130995 -11519301 + L1ME4a LINE L1 5987 6120 -4 1 1768 315 0 0 0 chrX 155132113 155132148 -11518148 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1768 235 337 0 11 chrX 155132362 155132449 -11517847 + L2a LINE L2 3340 3425 -1 1 1768 256 84 0 98 chrX 155132585 155132677 -11517619 + T-rich Low_complexity Low_complexity 1 83 0 1 1768 286 235 82 109 chrX 155132982 155132995 -11517301 - ID_B1 SINE B4 0 224 118 1 1768 453 183 124 41 chrX 155132995 155133092 -11517204 - B1F1 SINE Alu -8 141 37 1 1768 825 168 176 10 chrX 155133548 155133741 -11516555 + URR1B DNA MER1_type 1 225 0 1 1768 2578 45 13 0 chrX 155133748 155134061 -11516235 + L1_Mus1 LINE L1 6249 6565 -2 1 1768 882 295 112 55 chrX 155134397 155134699 -11515597 + MLT1C LTR MaLR 3 325 -142 1 1768 2816 113 2 0 chrX 155134699 155135122 -11515174 + L1Md_F2 LINE L1 6144 6567 -15 1 1768 882 295 112 55 chrX 155135122 155135257 -11515039 + MLT1C LTR MaLR 326 465 -2 1 1768 1315 264 49 9 chrX 155136700 155137044 -11513252 - MTE2b LTR MaLR -21 358 1 1 1768 5966 276 37 16 chrX 155137058 155137260 -11513036 - MTE2b-int LTR MaLR -10 1570 1364 1 1768 207 0 0 0 chrX 155137260 155137283 -11513013 + (CCAA)n Simple_repeat Simple_repeat 2 24 0 1 1768 5966 276 37 16 chrX 155137283 155137927 -11512369 - MTE2b-int LTR MaLR -217 1363 727 1 1768 447 19 0 0 chrX 155137927 155137979 -11512317 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 1 1768 2294 118 67 3 chrX 155137980 155138337 -11511959 - Lx3A LINE L1 -16 6965 6586 1 1768 5966 276 37 16 chrX 155138337 155139019 -11511277 - MTE2b-int LTR MaLR -854 726 7 1 1768 957 304 60 62 chrX 155139117 155139239 -11511057 - MT2A LTR ERVL -134 399 274 1 1768 195 42 0 0 chrX 155139239 155139263 -11511033 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1 1768 957 304 60 62 chrX 155139263 155139540 -11510756 - MT2A LTR ERVL -260 273 1 1 1768 989 217 45 70 chrX 155140197 155140484 -11509812 + Lx8 LINE L1 7185 7464 -9 1 1768 453 271 224 49 chrX 155140612 155141085 -11509211 + MLT2B4 LTR ERVL 1 556 0 1 1768 236 318 87 25 chrX 155141804 155141926 -11508370 - MIRb SINE MIR -58 150 20 1 1768 321 26 0 0 chrX 155142766 155142804 -11507492 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1768 666 150 0 0 chrX 155142804 155142924 -11507372 + (GA)n Simple_repeat Simple_repeat 2 121 0 2 1768 545 227 65 20 chrX 155142934 155143087 -11507209 - RSINE1 SINE B4 -4 161 2 2 1768 647 274 47 54 chrX 155143218 155143496 -11506800 + B4A SINE B4 3 278 -14 2 1768 1066 284 48 18 chrX 155144675 155144948 -11505348 - B4A SINE B4 -2 290 10 2 1768 2562 133 5 25 chrX 155145569 155145971 -11504325 - ORR1B1 LTR MaLR 0 394 1 2 1768 8002 71 5 6 chrX 155146600 155147664 -11502632 + Lx3_Mus LINE L1 5947 7009 0 2 1768 361 34 17 33 chrX 155148724 155148784 -11501512 + (CAAAAA)n Simple_repeat Simple_repeat 3 61 0 2 1768 212 303 12 62 chrX 155148811 155148892 -11501404 - MER5B DNA MER1_type -101 77 1 2 1768 809 148 0 117 chrX 155149435 155149540 -11500756 + MTB-int LTR MaLR 903 986 -112 2 1768 1379 75 26 5 chrX 155149540 155149729 -11500567 + B2_Mm2 SINE B2 1 193 -2 2 1768 809 148 0 117 chrX 155149729 155149845 -11500451 + MTB-int LTR MaLR 987 1098 0 2 1768 2980 67 20 3 chrX 155149847 155149859 -11500437 + MTB LTR MaLR 3 14 -386 2 1768 207 0 0 0 chrX 155149859 155149882 -11500414 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1768 2980 67 20 3 chrX 155149882 155150260 -11500036 + MTB LTR MaLR 15 399 -1 2 1768 347 315 178 37 chrX 155150790 155151060 -11499236 + L1M5 LINE L1 3424 3731 -2415 2 1768 348 374 74 43 chrX 155151137 155151394 -11498902 - MIR SINE MIR 0 268 4 2 1768 311 245 19 38 chrX 155151501 155151607 -11498689 - L1MB3 LINE L1 -19 6164 6061 2 1768 285 75 0 0 chrX 155151786 155151826 -11498470 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1768 337 279 85 0 chrX 155151973 155152102 -11498194 + HAL1 LINE L1 1529 1668 -839 2 1768 613 314 11 65 chrX 155152689 155152715 -11497581 - B3A SINE B2 -16 182 161 2 1768 387 0 0 0 chrX 155152715 155152758 -11497538 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1768 613 314 11 65 chrX 155152758 155152915 -11497381 - B3A SINE B2 -38 160 9 2 1768 472 314 37 25 chrX 155153056 155153219 -11497077 - MER5A DNA MER1_type -22 167 3 2 1768 312 27 0 0 chrX 155154367 155154404 -11495892 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1768 496 335 185 4 chrX 155154534 155154698 -11495598 + MLT2D LTR ERVL 1 187 -227 2 1768 450 0 0 0 chrX 155154698 155154748 -11495548 + (GA)n Simple_repeat Simple_repeat 2 51 0 2 1768 496 335 185 4 chrX 155154748 155154853 -11495443 + MLT2D LTR ERVL 188 318 -96 2 1768 189 147 0 0 chrX 155154855 155154889 -11495407 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 2 1768 480 77 0 0 chrX 155155305 155155370 -11494926 + (TTCC)n Simple_repeat Simple_repeat 1 65 0 2 1768 408 310 34 8 chrX 155155374 155155387 -11494909 - PB1D9 SINE Alu 0 120 104 2 1768 1160 82 0 0 chrX 155155387 155155534 -11494762 - B1_Mus2 SINE Alu 0 147 1 2 1768 495 284 0 10 chrX 155155534 155155637 -11494659 - B1_Mur2 SINE Alu -47 102 1 2 1768 475 304 104 47 chrX 155156074 155156285 -11494011 + MER119 DNA MER1_type 10 232 -351 2 1768 405 268 10 0 chrX 155156463 155156560 -11493736 + MER119 DNA MER1_type 231 328 -255 2 1768 960 229 76 42 chrX 155157295 155157532 -11492764 + B4 SINE B4 40 284 -8 2 1768 393 75 0 0 chrX 155157539 155157592 -11492704 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1768 6755 75 32 8 chrX 155157646 155158849 -11491447 - L1_Mus2 LINE L1 -6 6560 5336 2 1768 596 219 0 120 chrX 155158848 155159040 -11491256 - L1VL1 LINE L1 -6033 389 221 2 1768 189 0 0 0 chrX 155159498 155159519 -11490777 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1768 351 0 0 0 chrX 155159519 155159557 -11490739 + (GA)n Simple_repeat Simple_repeat 2 40 0 2 1768 773 337 73 29 chrX 155160022 155160297 -11489999 - B4A SINE B4 0 292 6 2 1768 353 357 96 46 chrX 155160744 155161005 -11489291 + L2c LINE L2 3074 3347 -40 2 1768 300 349 99 23 chrX 155161015 155161359 -11488937 - MLT1I LTR MaLR -11 433 66 2 1768 537 167 0 0 chrX 155161541 155161667 -11488629 + (TA)n Simple_repeat Simple_repeat 1 126 0 2 1768 644 316 12 114 chrX 155162388 155162642 -11487654 + B4A SINE B4 3 230 -62 2 1768 509 224 16 0 chrX 155162679 155162804 -11487492 - Lx9 LINE L1 -594 7050 6924 2 1768 2991 229 72 15 chrX 155162815 155163539 -11486757 + Lx7 LINE L1 6468 7232 -464 2 1768 342 0 0 0 chrX 155163539 155163577 -11486719 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1768 588 259 0 0 chrX 155163630 155163777 -11486519 - Lx7 LINE L1 -388 7308 7162 2 1768 411 21 0 0 chrX 155163798 155163846 -11486450 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1768 1243 92 5 52 chrX 155163989 155164183 -11486113 + B2_Mm2 SINE B2 2 186 -9 2 1768 453 174 71 0 chrX 155164204 155164302 -11485994 - Lx9 LINE L1 -720 6924 6820 2 1768 760 287 14 94 chrX 155164300 155164727 -11485569 + Lx9 LINE L1 7203 7595 -49 2 1768 698 157 74 0 chrX 155164794 155164915 -11485381 + B1_Mur4 SINE Alu 1 130 -20 2 1768 699 196 0 0 chrX 155164915 155165058 -11485238 + GA-rich Low_complexity Low_complexity 3 145 0 2 1768 225 289 0 0 chrX 155165071 155165116 -11485180 + B4A SINE B4 242 286 -6 2 1768 322 217 29 0 chrX 155165289 155165358 -11484938 - ID4_ SINE ID -11 72 2 2 1768 369 281 0 0 chrX 155165751 155165840 -11484456 - MLT1B LTR MaLR 0 390 302 2 1768 215 146 0 18 chrX 155166045 155166101 -11484195 + T-rich Low_complexity Low_complexity 3 57 0 2 1768 714 257 28 6 chrX 155166114 155166290 -11484006 - B3A SINE B2 -18 180 1 2 1768 521 272 0 50 chrX 155166990 155167110 -11483186 + B1F SINE Alu 20 133 -16 2 1768 438 167 0 0 chrX 155167114 155167198 -11483098 + GA-rich Low_complexity Low_complexity 1 84 0 2 1768 395 320 69 6 chrX 155167198 155167371 -11482925 + Lx8 LINE L1 6927 7110 -363 2 1768 201 167 32 48 chrX 155167551 155167614 -11482682 + GA-rich Low_complexity Low_complexity 5 66 0 2 1768 247 316 13 13 chrX 155167622 155167699 -11482597 + LTR33B LTR ERVL 98 174 -329 2 1768 305 186 122 10 chrX 155167764 155167862 -11482434 + LTR33B LTR ERVL 393 501 -2 2 1768 946 298 66 38 chrX 155168194 155168588 -11481708 - Lx8 LINE L1 -263 7210 6806 2 1768 3943 221 84 134 chrX 155168591 155169617 -11480679 + Lx8 LINE L1 3941 4964 -916 2 1768 3597 113 9 8 chrX 155169617 155170152 -11480144 + Lx LINE L1 6113 6648 -6 2 1768 3943 221 84 134 chrX 155170152 155170454 -11479842 + Lx8 LINE L1 4965 5245 -635 2 1768 225 0 0 0 chrX 155170454 155170479 -11479817 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 1768 654 207 64 7 chrX 155170489 155170630 -11479666 + B1_Mur1 SINE Alu 1 149 0 2 1768 503 56 0 14 chrX 155170631 155170703 -11479593 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 2 1768 3943 226 81 127 chrX 155170703 155171449 -11478847 + Lx8 LINE L1 5251 5928 -1545 2 1768 261 236 26 35 chrX 155171578 155171692 -11478604 - Lx8 LINE L1 -1261 6212 6100 2 1768 306 257 48 19 chrX 155171687 155171790 -11478506 + Lx8 LINE L1 5801 5906 -1567 2 1768 26 30 0 0 chrX 155171824 155171857 -11478439 + AT_rich Low_complexity Low_complexity 1 33 0 2 1768 22 0 0 0 chrX 155172804 155172826 -11477470 + AT_rich Low_complexity Low_complexity 1 22 0 2 1768 261 0 0 0 chrX 155173122 155173151 -11477145 + (TC)n Simple_repeat Simple_repeat 2 30 0 2 1768 240 35 0 0 chrX 155173151 155173179 -11477117 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1768 3070 144 73 4 chrX 155173228 155173777 -11476519 - Lx2B LINE L1 -78 5808 5222 2 1768 2738 180 11 4 chrX 155173776 155174311 -11475985 + Lx2B LINE L1 5804 6342 -658 2 1768 499 277 9 35 chrX 155174323 155174439 -11475857 - B3A SINE B2 -84 114 2 2 1768 23 33 0 0 chrX 155174512 155174542 -11475754 + AT_rich Low_complexity Low_complexity 1 30 0 2 1768 289 390 11 0 chrX 155174622 155174717 -11475579 - MER81 DNA AcHobo 0 114 19 2 1768 1297 148 13 13 chrX 155175517 155175749 -11474547 - Lx4B LINE L1 -423 6635 6404 2 1768 745 202 124 10 chrX 155175731 155175953 -11474343 + Lx4B LINE L1 6735 7050 -8 2 1768 234 0 0 0 chrX 155176718 155176744 -11473552 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 1768 324 120 0 0 chrX 155176747 155176797 -11473499 + (TTGG)n Simple_repeat Simple_repeat 1 50 0 2 1768 270 319 0 0 chrX 155176797 155176869 -11473427 - ID4 SINE ID -2 81 10 2 1768 259 327 64 18 chrX 155177395 155177504 -11472792 - MIRb SINE MIR -129 139 26 2 1768 1135 254 17 6 chrX 155177877 155178222 -11472074 + L1ME1 LINE L1 5734 6082 -97 2 1768 2355 69 119 11 chrX 155179177 155179529 -11470767 + RLTR10 LTR ERVK 1 390 0 2 1768 5212 17 0 70 chrX 155179529 155180230 -11470066 + RLTR10-int LTR ERVK 302 953 -1034 2 1768 8532 12 0 0 chrX 155180324 155181319 -11468977 + RLTR10-int LTR ERVK 990 1984 -3 2 1768 2185 59 110 23 chrX 155181321 155181667 -11468629 + RLTR10 LTR ERVK 1 376 -14 2 1768 1905 267 65 24 chrX 155183268 155183632 -11466664 - L1MB8 LINE L1 -23 6311 5781 2 1768 189 0 0 0 chrX 155183632 155183653 -11466643 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1768 1905 275 68 31 chrX 155183653 155184129 -11466167 - L1MB8 LINE L1 -398 5780 5278 2 1768 258 344 44 59 chrX 155184652 155184788 -11465508 - MIR SINE MIR -66 202 64 2 1768 831 122 0 0 chrX 155184963 155185094 -11465202 + (GAAA)n Simple_repeat Simple_repeat 4 134 0 2 1768 182 383 59 20 chrX 155186370 155186623 -11463673 + L2 LINE L2 2693 2955 -464 2 1768 240 293 107 0 chrX 155186808 155186883 -11463413 + L2a LINE L2 3344 3426 0 2 1768 489 358 20 62 chrX 155187140 155187362 -11462934 + LTR16C LTR ERVL 184 456 -112 2 1768 674 288 31 10 chrX 155187642 155187835 -11462461 + B3 SINE B2 1 197 -19 2 1768 597 349 120 28 chrX 155188284 155188641 -11461655 - MER90a LTR ERV1 -20 594 205 2 1768 25 0 0 0 chrX 155188844 155188869 -11461427 + AT_rich Low_complexity Low_complexity 1 25 0 2 1769 3890 67 22 6 chrX 155189293 155189801 -11460495 - L1Md_F2 LINE L1 -13 6569 6054 2 1769 2071 180 38 13 chrX 155190165 155190735 -11459561 - RMER19A LTR ERVK 0 737 98 2 1769 480 18 0 0 chrX 155190736 155190793 -11459503 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1769 727 169 0 25 chrX 155191114 155191235 -11459061 + B1_Mur4 SINE Alu 32 149 -1 2 1769 489 341 45 17 chrX 155191800 155192152 -11458144 - Lx8 LINE L1 -217 7256 6895 2 1769 335 302 8 41 chrX 155192155 155192276 -11458020 - ID2 SINE ID -30 122 6 2 1769 183 162 14 56 chrX 155192350 155192422 -11457874 + (TATAA)n Simple_repeat Simple_repeat 5 73 0 2 1769 239 250 101 38 chrX 155192530 155192609 -11457687 + B4 SINE B4 1 84 -208 2 1769 194 342 0 64 chrX 155192912 155192990 -11457306 + L4 LINE RTE 1067 1139 -890 2 1769 1166 68 0 0 chrX 155193503 155193649 -11456647 + B1_Mm SINE Alu 1 146 -1 3 1769 792 74 16 84 chrX 155193657 155193848 -11456448 + GA-rich Low_complexity Low_complexity 3 180 0 3 1769 266 273 76 0 chrX 155193955 155194021 -11456275 + MLT1L LTR MaLR 1 71 -539 3 1769 388 283 101 43 chrX 155194264 155194452 -11455844 + LTR37B LTR ERV1 258 456 -12 3 1769 225 65 0 0 chrX 155194633 155194664 -11455632 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 3 1769 358 337 75 14 chrX 155194933 155195230 -11455066 + MER2 DNA MER2_type 8 344 -1 3 1769 914 229 25 10 chrX 155196021 155196224 -11454072 + B3 SINE B2 1 206 -10 3 1769 328 302 10 40 chrX 155196282 155196382 -11453914 + B1F SINE Alu 43 139 -10 3 1769 837 269 59 34 chrX 155196669 155196873 -11453423 + B3 SINE B2 8 216 0 3 1769 934 214 50 0 chrX 155197206 155197388 -11452908 + B3 SINE B2 15 205 -11 3 1769 510 96 0 0 chrX 155197401 155197474 -11452822 + (GGGA)n Simple_repeat Simple_repeat 1 73 0 3 1769 293 198 12 0 chrX 155197559 155197645 -11452651 + (TA)n Simple_repeat Simple_repeat 1 87 0 3 1769 302 261 171 0 chrX 155197743 155197831 -11452465 + MER5A DNA MER1_type 10 112 -77 3 1769 452 352 24 42 chrX 155197979 155198058 -11452238 + RSINE1 SINE B4 3 75 -90 3 1769 3197 51 35 2 chrX 155198058 155198452 -11451844 - MTB_Mm LTR MaLR 0 407 1 3 1769 452 352 24 42 chrX 155198452 155198538 -11451758 + RSINE1 SINE B4 76 165 0 3 1769 639 270 40 20 chrX 155198737 155198937 -11451359 - B3 SINE B2 -11 205 2 3 1769 264 271 37 10 chrX 155199044 155199143 -11451153 - MamGypLTR2b LTR Gypsy -26 896 702 3 1769 185 306 0 0 chrX 155199572 155199621 -11450675 - L2a LINE L2 0 3426 3378 3 1769 4021 139 50 24 chrX 155199770 155200468 -11449828 + RMER6D LTR ERVK 1 716 -4 3 1769 395 267 0 32 chrX 155201684 155201777 -11448519 + ID_B1 SINE B4 82 171 -53 3 1769 371 333 0 25 chrX 155201777 155201804 -11448492 + PB1D10 SINE Alu 1 117 0 3 1769 612 297 0 0 chrX 155201824 155201952 -11448344 + ID_B1 SINE B4 81 208 -16 3 1769 183 80 0 0 chrX 155202036 155202061 -11448235 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 3 1769 943 332 8 8 chrX 155202073 155202325 -11447971 + B4A SINE B4 41 292 0 3 1769 476 410 62 16 chrX 155202580 155202966 -11447330 - L2 LINE L2 -337 3082 2679 3 1769 184 271 212 0 chrX 155203000 155203085 -11447211 - MIRb SINE MIR -25 243 141 3 1769 1125 254 55 77 chrX 155203265 155203627 -11446669 - ORR1E LTR MaLR -2 357 4 3 1769 576 380 82 53 chrX 155204790 155205379 -11444917 + LTR41 LTR ERVL 3 615 -153 3 1769 492 221 147 54 chrX 155205379 155205508 -11444788 - B1_Mur1 SINE Alu -8 141 1 3 1769 576 380 82 53 chrX 155205508 155205557 -11444739 + LTR41 LTR ERVL 616 661 -107 3 1769 1363 55 44 6 chrX 155205557 155205738 -11444558 - B2_Mm2 SINE B2 -6 189 2 3 1769 576 380 82 53 chrX 155205738 155205815 -11444481 + LTR41 LTR ERVL 662 738 -30 3 1769 288 200 37 24 chrX 155205982 155206064 -11444232 + (CAGAGA)n Simple_repeat Simple_repeat 4 86 0 3 1769 393 331 156 44 chrX 155206152 155206363 -11443933 - L2a LINE L2 -5 3421 3203 3 1769 777 271 166 34 chrX 155206363 155206809 -11443487 - MLT1D LTR MaLR 0 505 1 3 1769 393 331 156 44 chrX 155206809 155207052 -11443244 - L2a LINE L2 -224 3202 2917 3 1769 229 333 0 0 chrX 155208026 155208101 -11442195 - L2a LINE L2 0 3426 3352 3 1769 183 159 22 22 chrX 155208121 155208166 -11442130 - L2a LINE L2 -776 2643 2599 3 1769 300 257 42 14 chrX 155208266 155208337 -11441959 + LTR85c LTR Gypsy? 474 546 -277 3 1769 2316 164 42 4 chrX 155208551 155209004 -11441292 + Lx9 LINE L1 7059 7528 -116 3 1769 462 330 85 0 chrX 155209004 155209180 -11441116 - B4A SINE B4 -100 192 2 3 1769 329 154 120 120 chrX 155209182 155209234 -11441062 - RCHARR1 DNA MER1_type -440 534 492 3 1769 1179 68 0 0 chrX 155209234 155209381 -11440915 - B1_Mus1 SINE Alu 0 148 2 3 1769 329 154 120 120 chrX 155209381 155209461 -11440835 - RCHARR1 DNA MER1_type -483 491 402 3 1769 611 281 0 7 chrX 155209437 155209577 -11440719 + B4A SINE B4 122 260 -32 3 1769 203 103 26 0 chrX 155209581 155209620 -11440676 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1769 665 313 68 57 chrX 155209656 155209937 -11440359 - RCHARR1 DNA MER1_type -663 311 28 3 1769 225 0 0 0 chrX 155210450 155210475 -11439821 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 1769 3852 82 25 9 chrX 155210587 155211271 -11439025 - Lx LINE L1 -679 5975 5276 3 1769 2793 114 23 9 chrX 155211271 155211704 -11438592 + Lx2 LINE L1 6559 6997 0 3 1769 702 124 0 0 chrX 155211929 155212050 -11438246 + (GGAAA)n Simple_repeat Simple_repeat 3 123 0 3 1769 221 196 0 21 chrX 155212346 155212393 -11437903 + CT-rich Low_complexity Low_complexity 2 47 0 3 1769 501 293 50 0 chrX 155213700 155213840 -11436456 - MER5A1 DNA MER1_type -1 165 19 3 1769 235 247 151 12 chrX 155214022 155214108 -11436188 + MamGypLTR1c LTR Gypsy 52 149 -654 3 1769 488 59 0 14 chrX 155214109 155214178 -11436118 + (GA)n Simple_repeat Simple_repeat 1 68 0 3 1769 429 311 50 40 chrX 155214373 155214574 -11435722 - MIR SINE MIR -45 217 15 3 1769 240 322 67 8 chrX 155214620 155214739 -11435557 + Charlie8 DNA MER1_type 619 744 -1684 3 1769 969 326 60 32 chrX 155214770 155215173 -11435123 + FordPrefect DNA Tip100 779 1192 -491 3 1769 510 262 6 45 chrX 155215237 155215393 -11434903 - Lx8 LINE L1 -153 7320 7171 3 1769 4117 62 3 2 chrX 155215391 155215956 -11434340 - L1_Mm LINE L1 -413 5470 4905 3 1769 3697 66 0 26 chrX 155215956 155216455 -11433841 + L1Md_F2 LINE L1 6085 6570 -12 3 1769 323 278 0 0 chrX 155216457 155216529 -11433767 - Lx8 LINE L1 -292 7181 7110 3 1769 1087 318 146 30 chrX 155216537 155217249 -11433047 + Charlie8 DNA MER1_type 1450 2244 -184 3 1769 360 188 0 0 chrX 155217481 155217550 -11432746 - ID4 SINE ID -13 70 2 3 1769 278 348 87 22 chrX 155217728 155217913 -11432383 - MT2A LTR ERVL -149 384 188 3 1769 873 264 42 0 chrX 155218940 155219133 -11431163 + B3 SINE B2 1 201 -15 3 1769 192 354 62 12 chrX 155219782 155219862 -11430434 - MIRm SINE MIR -27 249 166 3 1769 684 298 214 24 chrX 155220158 155220574 -11429722 + MLT1H1 LTR MaLR 48 542 -13 3 1769 197 390 0 25 chrX 155220630 155220709 -11429587 - L2 LINE L2 -561 2858 2782 3 1769 189 0 0 0 chrX 155221157 155221178 -11429118 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 3 1769 643 248 22 29 chrX 155221178 155221315 -11428981 - B1_Mur1 SINE Alu -12 137 2 3 1769 413 362 114 37 chrX 155221804 155222294 -11428002 + L1M5 LINE L1 4483 5010 -1136 3 1769 2780 243 53 48 chrX 155222355 155223271 -11427025 + L1_Mur3 LINE L1 332 1252 -6476 3 1769 7441 47 4 0 chrX 155223267 155224217 -11426079 + L1_Mus1 LINE L1 5613 6566 -1 3 1769 23 0 0 0 chrX 155224217 155224240 -11426056 + AT_rich Low_complexity Low_complexity 1 23 0 3 1769 3039 135 59 0 chrX 155224574 155225167 -11425129 + L1_Mur3 LINE L1 1236 1863 -4017 3 1769 6808 205 51 44 chrX 155225201 155226918 -11423378 + Lx7 LINE L1 5969 7696 0 3 1769 31 0 0 0 chrX 155226924 155226955 -11423341 + AT_rich Low_complexity Low_complexity 1 31 0 3 1769 349 228 78 99 chrX 155226970 155227111 -11423185 + B1_Mur3 SINE Alu 5 142 -7 3 1769 858 70 0 0 chrX 155227112 155227226 -11423070 + (GAAA)n Simple_repeat Simple_repeat 4 117 0 3 1769 1678 21 0 0 chrX 155227226 155227418 -11422878 + B2_Mm1t SINE B2 2 193 0 3 1769 410 53 18 0 chrX 155227419 155227476 -11422820 + (GAAA)n Simple_repeat Simple_repeat 2 59 0 3 1769 1662 149 13 30 chrX 155227481 155227786 -11422510 + Lx4B LINE L1 6754 7053 -5 3 1769 881 134 0 7 chrX 155227999 155228149 -11422147 + (GGAA)n Simple_repeat Simple_repeat 1 149 0 3 1769 1040 250 9 8 chrX 155228149 155228442 -11421854 + L1M2 LINE L1 3577 3882 -2261 3 1769 343 235 52 0 chrX 155228923 155229038 -11421258 + L1M4 LINE L1 3368 3488 -2658 3 1769 431 277 28 49 chrX 155229040 155229184 -11421112 + B1F SINE Alu 1 141 -8 3 1769 4206 84 5 7 chrX 155229275 155229860 -11420436 + L1Md_F2 LINE L1 5993 6576 -6 3 1769 3867 112 29 16 chrX 155229897 155231116 -11419180 + L1_Mus1 LINE L1 534 1768 -4115 3 1769 5875 56 0 5 chrX 155231095 155231869 -11418427 - L1Md_F2 LINE L1 -193 5690 4921 3 1769 6938 45 17 6 chrX 155231869 155232739 -11417557 + L1Md_F2 LINE L1 5703 6582 0 3 1769 25107 96 2 55 chrX 155232739 155237839 -11412457 + L1_Mus1 LINE L1 1757 6566 -1 3 1769 270 252 58 0 chrX 155237841 155237944 -11412352 + L1MA4 LINE L1 5814 5922 -378 3 1769 1580 179 102 9 chrX 155238494 155238816 -11411480 - MTD LTR MaLR 0 419 68 3 1769 1861 209 66 3 chrX 155239232 155239610 -11410686 - MTD LTR MaLR -8 411 10 3 1769 717 40 0 10 chrX 155239703 155239805 -11410491 - L1_Mus1 LINE L1 -2 6565 6465 3 1769 387 326 73 60 chrX 155239854 155240178 -11410118 + L2a LINE L2 2835 3163 -263 3 1769 299 328 115 66 chrX 155240323 155240506 -11409790 + MLT1B LTR MaLR 197 388 -2 3 1769 194 375 98 0 chrX 155240644 155240756 -11409540 + L2a LINE L2 3304 3426 0 3 1769 476 322 117 114 chrX 155240973 155241080 -11409216 + ORR1E LTR MaLR 1 110 -249 3 1769 3227 86 4 20 chrX 155241080 155241531 -11408765 + L1_Mus2 LINE L1 6123 6566 0 3 1769 476 322 117 114 chrX 155241531 155241781 -11408515 + ORR1E LTR MaLR 111 359 0 3 1769 336 372 100 42 chrX 155241838 155242219 -11408077 - LTR16E1 LTR ERVL -71 467 4 3 1769 324 391 0 17 chrX 155242856 155242973 -11407323 + MLT1G LTR MaLR 22 136 -455 3 1769 486 264 7 8 chrX 155242993 155243107 -11407189 - PB1D10 SINE Alu -21 128 16 3 1769 189 0 0 0 chrX 155243247 155243268 -11407028 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1769 922 264 38 9 chrX 155244231 155244441 -11405855 + B3 SINE B2 1 216 0 3 1769 730 120 23 0 chrX 155244443 155244576 -11405720 + L1_Mus3 LINE L1 6479 6614 -24 3 1769 270 149 0 0 chrX 155244573 155244620 -11405676 - L1_Mm LINE L1 -528 5355 5309 3 1769 198 103 0 0 chrX 155244620 155244649 -11405647 + (T)n Simple_repeat Simple_repeat 1 29 0 3 1769 252 0 0 0 chrX 155244699 155244727 -11405569 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 1769 1135 51 0 0 chrX 155244727 155244864 -11405432 - B1_Mus1 SINE Alu -10 138 2 3 1769 1544 116 4 8 chrX 155244865 155245117 -11405179 - L1_Mm LINE L1 -560 5323 5073 3 1769 183 186 0 0 chrX 155245144 155245187 -11405109 + A-rich Low_complexity Low_complexity 1 43 0 3 1769 21 0 0 0 chrX 155245991 155246012 -11404284 + AT_rich Low_complexity Low_complexity 1 21 0 4 1769 383 294 109 7 chrX 155246366 155246503 -11403793 - MER5A1 DNA MER1_type -5 161 11 4 1769 435 276 81 20 chrX 155246537 155246685 -11403611 + MER5A DNA MER1_type 20 176 -2 4 1769 2587 168 73 13 chrX 155247552 155248102 -11402194 - L1_Mur3 LINE L1 -13 5867 5285 4 1769 3061 294 10 21 chrX 155248243 155249280 -11401016 + Lx7 LINE L1 6135 7199 -274 4 1769 1175 48 0 26 chrX 155249361 155249512 -11400784 - B1_Mus2 SINE Alu 0 147 1 4 1769 252 0 0 0 chrX 155250082 155250110 -11400186 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 1769 1017 134 117 19 chrX 155250961 155251166 -11399130 - URR1A DNA MER1_type -1 225 1 4 1769 628 223 25 31 chrX 155251407 155251569 -11398727 + MER5A1 DNA MER1_type 1 161 -5 4 1769 603 215 61 10 chrX 155252136 155252333 -11397963 - L1MA7 LINE L1 -1 6290 6084 4 1769 29777 85 3 3 chrX 155252379 155257626 -11392670 + L1Md_F2 LINE L1 336 5585 -298 4 1769 7265 81 7 1 chrX 155257628 155258598 -11391698 + L1Md_F2 LINE L1 5588 6563 -19 4 1769 1407 108 0 0 chrX 155259375 155259589 -11390707 - Lx2 LINE L1 0 6997 6784 4 1769 335 306 73 58 chrX 155260858 155261063 -11389233 + LTR16A1 LTR ERVL 213 420 -36 4 1769 206 62 0 30 chrX 155261063 155261096 -11389200 + (TTA)n Simple_repeat Simple_repeat 2 33 0 4 1769 3738 208 68 23 chrX 155261096 155262115 -11388181 - Lx2B LINE L1 -20 6980 5916 4 1769 3232 128 61 2 chrX 155262120 155262719 -11387577 + Lx4B LINE L1 5293 5928 -1130 4 1769 273 165 10 62 chrX 155262885 155262982 -11387314 + Lx4B LINE L1 6964 7055 -3 4 1769 5128 67 42 1 chrX 155263158 155264237 -11386059 + L1Md_F2 LINE L1 5123 6237 -345 4 1769 1673 74 0 4 chrX 155264237 155264467 -11385829 + L1Md_F2 LINE L1 6354 6582 0 4 1769 5102 66 39 1 chrX 155264467 155264522 -11385774 + L1Md_F2 LINE L1 6238 6315 -267 4 1769 2699 0 0 0 chrX 155264525 155264822 -11385474 - L1Md_T LINE L1 0 6582 6286 4 1769 1934 106 4 4 chrX 155264820 155265096 -11385200 + L1_Mus2 LINE L1 6291 6566 0 4 1769 588 254 148 0 chrX 155267105 155267274 -11383022 - B3A SINE B2 -4 194 1 4 1769 963 245 24 5 chrX 155267696 155267901 -11382395 - B3 SINE B2 -6 210 2 4 1769 375 374 98 20 chrX 155268204 155268450 -11381846 + LTR16C LTR ERVL 2 266 -223 4 1769 1009 315 61 31 chrX 155268485 155268845 -11381451 - LTR40a LTR ERVL -25 494 124 4 1769 304 304 62 9 chrX 155268938 155269051 -11381245 + LTR16C LTR ERVL 277 395 -94 4 1769 772 230 58 19 chrX 155269064 155269272 -11381024 - B3 SINE B2 0 216 1 4 1769 248 300 0 0 chrX 155269338 155269349 -11380947 + ID_B1 SINE B4 136 195 -29 4 1769 296 204 0 0 chrX 155269349 155269398 -11380898 + B1F SINE Alu 69 117 -32 4 1769 242 208 28 0 chrX 155269405 155269477 -11380819 + GA-rich Low_complexity Low_complexity 3 76 0 4 1769 351 0 0 0 chrX 155269908 155269947 -11380349 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1769 3901 171 10 10 chrX 155270025 155270710 -11379586 - Lx5 LINE L1 0 7050 6366 4 1769 344 44 0 0 chrX 155270710 155270755 -11379541 + Lx4B LINE L1 5748 5792 -1266 4 1769 1268 27 0 0 chrX 155270759 155270905 -11379391 + B1_Mm SINE Alu 2 147 0 4 1769 1457 205 18 27 chrX 155270922 155271253 -11379043 + Lx5 LINE L1 6052 6379 -671 4 1769 572 335 22 22 chrX 155272427 155272610 -11377686 + MER5A DNA MER1_type 7 189 0 4 1769 609 198 0 0 chrX 155273239 155273365 -11376931 + GA-rich Low_complexity Low_complexity 3 128 0 4 1769 222 128 0 0 chrX 155273565 155273604 -11376692 + (ATAGG)n Simple_repeat Simple_repeat 2 40 0 4 1769 1075 252 141 24 chrX 155274031 155274401 -11375895 + Lx8 LINE L1 6610 7022 -451 4 1769 865 269 28 46 chrX 155274400 155274684 -11375612 + Lx8 LINE L1 7133 7411 -62 4 1769 209 33 33 0 chrX 155274684 155274714 -11375582 + (GA)n Simple_repeat Simple_repeat 2 32 0 4 1769 273 260 39 20 chrX 155274715 155274817 -11375479 + Lx8 LINE L1 7370 7473 0 4 1769 180 310 141 0 chrX 155274887 155274958 -11375338 - MER5B DNA MER1_type -5 173 93 4 1769 2312 49 0 3 chrX 155275040 155275329 -11374967 + L1_Mus1 LINE L1 6280 6567 0 4 1769 378 257 38 9 chrX 155275953 155276059 -11374237 + MER5A1 DNA MER1_type 52 160 -6 4 1769 258 290 118 0 chrX 155276087 155276180 -11374116 + MER5B DNA MER1_type 20 123 -55 4 1769 474 311 22 29 chrX 155276535 155276674 -11373622 - B1F SINE Alu -7 142 5 4 1769 1230 252 64 13 chrX 155277194 155277492 -11372804 - MTEa LTR MaLR -37 342 30 4 1769 483 233 236 27 chrX 155277554 155277843 -11372453 - L1ME1 LINE L1 -317 5862 5516 4 1769 1113 73 0 0 chrX 155277843 155277980 -11372316 + B1_Mus2 SINE Alu 1 137 -10 4 1769 234 0 0 0 chrX 155277980 155278006 -11372290 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1769 324 0 0 0 chrX 155278006 155278041 -11372255 + (GA)n Simple_repeat Simple_repeat 2 37 0 4 1769 235 265 185 60 chrX 155278041 155278178 -11372118 - L1ME1 LINE L1 -664 5515 5355 4 1769 596 213 122 117 chrX 155278188 155278385 -11371911 - B3A SINE B2 0 198 1 4 1769 409 217 70 21 chrX 155278397 155278591 -11371705 - L1ME1 LINE L1 -792 5354 5140 4 1769 778 263 141 6 chrX 155278588 155278717 -11371579 + L1MC LINE L1 4734 4873 -1273 4 1769 414 0 0 0 chrX 155278717 155278763 -11371533 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1769 778 264 129 7 chrX 155278763 155279021 -11371275 + L1MC LINE L1 4874 5180 -966 4 1769 231 282 0 0 chrX 155278994 155279065 -11371231 - L1MC LINE L1 -2147 5735 5665 4 1769 7477 150 32 29 chrX 155279262 155279958 -11370338 + L1_Mur3 LINE L1 3698 4370 -1510 4 1769 684 93 0 0 chrX 155279958 155280055 -11370241 + (TA)n Simple_repeat Simple_repeat 2 98 0 4 1769 7477 150 32 29 chrX 155280055 155280868 -11369428 + L1_Mur3 LINE L1 4371 5212 -668 4 1769 1621 134 151 3 chrX 155280874 155281158 -11369138 + MTC LTR MaLR 1 326 -95 4 1769 389 214 0 54 chrX 155281154 155281228 -11369068 - PB1D9 SINE Alu -48 72 3 4 1769 599 281 24 12 chrX 155281314 155281480 -11368816 + MLT1C LTR MaLR 1 168 -299 4 1769 507 296 58 15 chrX 155281501 155281707 -11368589 - B3 SINE B2 0 216 2 4 1769 755 330 60 35 chrX 155281897 155282377 -11367919 - Lx8 LINE L1 -219 7254 6763 4 1769 598 244 87 29 chrX 155282451 155282624 -11367672 + MLT1C LTR MaLR 277 459 -8 4 1769 21 0 0 0 chrX 155283731 155283752 -11366544 + AT_rich Low_complexity Low_complexity 1 21 0 4 1769 469 56 56 0 chrX 155283845 155283935 -11366361 + (CA)n Simple_repeat Simple_repeat 2 96 0 4 1769 273 318 82 76 chrX 155284245 155284586 -11365710 - HERV16-int LTR ERVL -2909 2087 1745 4 1769 232 330 0 0 chrX 155284586 155284689 -11365607 + CT-rich Low_complexity Low_complexity 2 104 0 4 1769 281 258 0 16 chrX 155284698 155284761 -11365535 - ID2 SINE ID -7 76 15 4 1769 828 351 61 24 chrX 155284850 155285357 -11364939 - HERV16-int LTR ERVL -3426 1570 1045 4 1769 759 266 254 32 chrX 155285454 155285984 -11364312 + MLT1E1A LTR MaLR 6 653 0 4 1769 241 331 161 31 chrX 155286398 155286560 -11363736 + L2a LINE L2 2984 3166 -260 4 1769 452 294 18 0 chrX 155286792 155286901 -11363395 - MER5A DNA MER1_type -78 111 1 4 1769 7453 59 0 9 chrX 155287025 155288018 -11362278 - L1Md_F2 LINE L1 -2 6580 5597 4 1769 443 68 0 0 chrX 155288016 155288075 -11362221 + L1_Mm LINE L1 5046 5104 -779 4 1769 312 280 21 11 chrX 155289288 155289382 -11360914 + MER53 DNA hAT 83 177 -16 4 1769 343 352 27 27 chrX 155289546 155289657 -11360639 - PB1D10 SINE Alu -6 111 1 4 1769 535 297 76 19 chrX 155289657 155289723 -11360573 - ID SINE ID -146 78 4 4 1769 813 287 25 52 chrX 155291043 155291367 -11358929 + Lx8 LINE L1 7159 7473 0 4 1769 1321 52 6 0 chrX 155291390 155291562 -11358734 + L1Md_F2 LINE L1 5413 5585 -298 4 1769 7059 67 48 5 chrX 155291563 155292518 -11357778 + L1Md_F2 LINE L1 5587 6582 0 4 1769 230 255 0 0 chrX 155292785 155292832 -11357464 - L2a LINE L2 -13 3413 3367 4 1769 258 268 14 14 chrX 155292798 155292870 -11357426 - MIR SINE MIR -20 242 171 4 1769 510 31 0 0 chrX 155293018 155293082 -11357214 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 4 1769 226 333 13 0 chrX 155293992 155294070 -11356226 - ID4 SINE ID -2 81 3 4 1769 270 0 0 0 chrX 155294203 155294233 -11356063 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1769 213 328 131 32 chrX 155294361 155294613 -11355683 + L2 LINE L2 1918 2194 -1225 4 1769 324 0 0 0 chrX 155294682 155294718 -11355578 + (TC)n Simple_repeat Simple_repeat 2 37 0 4 1769 279 0 0 0 chrX 155294718 155294748 -11355548 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1769 182 345 201 11 chrX 155294884 155295148 -11355148 + L2 LINE L2 2537 2850 -569 4 1769 189 207 79 79 chrX 155295451 155295514 -11354782 + L2c LINE L2 3323 3385 -2 4 1769 215 360 70 19 chrX 155296479 155296635 -11353661 - MIR SINE MIR -7 255 92 4 1769 1180 297 134 9 chrX 155296677 155297109 -11353187 + MLT1D LTR MaLR 7 492 -13 4 1769 210 289 0 0 chrX 155297317 155297362 -11352934 + L4 LINE RTE 1785 1829 -200 4 1769 182 375 87 46 chrX 155297672 155298041 -11352255 + L4 LINE RTE 1450 1833 -196 4 1769 202 345 0 12 chrX 155298897 155298982 -11351314 - L2c LINE L2 -60 3327 3244 4 1769 613 211 58 19 chrX 155299436 155299591 -11350705 + B2_Mm2 SINE B2 35 195 0 4 1769 2264 120 99 11 chrX 155299980 155300342 -11349954 + ORR1B1 LTR MaLR 1 394 0 4 1769 280 330 42 57 chrX 155301294 155301506 -11348790 - L1M5 LINE L1 -474 5720 5512 4 1769 227 344 43 11 chrX 155301901 155302086 -11348210 - L1M3 LINE L1 -1163 4980 4790 4 1769 3087 163 25 51 chrX 155302272 155302879 -11347417 + RLTR18 LTR ERVK 1 591 -25 4 1769 341 258 89 40 chrX 155302877 155302978 -11347318 - B1F SINE Alu -43 106 1 4 1769 1976 123 92 0 chrX 155303006 155303322 -11346974 + ORR1B1 LTR MaLR 1 345 -49 4 1769 1048 156 6 6 chrX 155303344 155303518 -11346778 + B2_Mm2 SINE B2 4 177 -18 4 1769 323 151 0 0 chrX 155303514 155303567 -11346729 + ORR1B1 LTR MaLR 342 394 0 4 1769 1676 162 26 75 chrX 155303759 155304187 -11346109 - RMER17C LTR ERVK -3 407 1 4 1769 376 357 74 40 chrX 155304329 155304504 -11345792 - MER58A DNA MER1_type -41 183 3 4 1769 230 275 25 0 chrX 155304775 155304855 -11345441 - L1M3 LINE L1 -1981 4159 4078 4 1769 853 182 86 12 chrX 155305312 155305557 -11344739 - L1MA9 LINE L1 -24 6288 6026 4 1769 491 207 126 14 chrX 155305556 155305720 -11344576 + L1MA9 LINE L1 5828 6010 -302 4 1769 537 237 0 0 chrX 155305753 155305867 -11344429 - PB1D10 SINE Alu -1 116 3 5 1769 241 252 48 57 chrX 155306033 155306138 -11344158 - L1M5 LINE L1 -3106 3040 2937 5 1769 450 264 26 43 chrX 155306764 155306879 -11343417 + ID_B1 SINE B4 104 216 -8 5 1769 5015 70 0 6 chrX 155307022 155307668 -11342628 - L1_Mus1 LINE L1 0 6567 5926 5 1769 701 122 26 0 chrX 155307668 155307783 -11342513 - L1_Mm LINE L1 -2272 3611 3494 5 1769 33822 36 0 0 chrX 155307773 155313412 -11336884 + L1Md_T LINE L1 2 5589 -297 5 1769 9015 6 0 0 chrX 155313412 155314435 -11335861 + L1Md_T LINE L1 5590 6585 0 5 1769 2434 77 5 50 chrX 155314435 155314819 -11335477 - L1_Mm LINE L1 -2362 3521 3155 5 1769 12418 75 50 1 chrX 155314817 155316699 -11333597 - L1_Mus1 LINE L1 -637 5930 3939 5 1769 1447 130 11 6 chrX 155316667 155317087 -11333209 - L1VL4 LINE L1 -2420 1139 716 5 1769 828 149 19 6 chrX 155317079 155317241 -11333055 - L1VL4 LINE L1 -5448 854 691 5 1769 465 103 0 0 chrX 155317536 155317604 -11332692 + (TC)n Simple_repeat Simple_repeat 1 68 0 5 1769 2331 281 123 61 chrX 155317737 155318375 -11331921 + Lx8 LINE L1 6123 6789 -684 5 1769 1098 158 153 0 chrX 155318375 155318571 -11331725 + URR1A DNA MER1_type 1 226 0 5 1769 2331 281 123 61 chrX 155318571 155319195 -11331101 + Lx8 LINE L1 6790 7464 -9 5 1769 825 166 210 6 chrX 155319240 155319416 -11330880 + B3 SINE B2 4 215 -1 5 1769 4768 219 22 18 chrX 155319431 155320205 -11330091 - Lx7 LINE L1 -844 6852 6074 5 221 2051 156 70 14 chrX 155320205 155320576 -11329720 + ORR1B1 LTR MaLR 3 394 0 5 1770 4768 219 22 18 chrX 155320576 155320680 -11329616 - Lx7 LINE L1 -1623 6073 5969 5 1770 1210 133 113 0 chrX 155320680 155320883 -11329413 + URR1A DNA MER1_type 1 226 0 5 1770 4768 219 22 18 chrX 155320883 155321113 -11329183 - Lx7 LINE L1 -1728 5968 5739 5 1770 5712 163 59 4 chrX 155321113 155322188 -11328108 + ORR1B1-int LTR MaLR 376 1509 0 5 1770 1179 165 95 18 chrX 155322188 155322410 -11327886 + ORR1B1 LTR MaLR 1 239 -155 5 1770 6734 96 26 10 chrX 155322415 155323851 -11326445 - Lx LINE L1 -14 6640 5178 5 1770 5053 156 1 13 chrX 155323855 155324767 -11325529 + L1_Mm LINE L1 4224 5129 -754 5 1770 1711 16 0 0 chrX 155324767 155324958 -11325338 + B2_Mm1a SINE B2 1 191 -2 5 1770 5053 156 1 13 chrX 155324958 155324986 -11325310 + L1_Mm LINE L1 5130 5153 -730 5 1770 987 172 11 6 chrX 155324986 155325161 -11325135 + ORR1B1 LTR MaLR 198 373 -21 5 1770 1105 244 76 8 chrX 155325190 155325454 -11324842 - ORR1B2 LTR MaLR -85 282 1 5 1770 258 331 124 0 chrX 155325701 155325822 -11324474 + MLT1H-int LTR MaLR 1024 1159 -250 5 1770 479 276 104 0 chrX 155325853 155325987 -11324309 - MER58A DNA MER1_type -26 198 51 5 1770 306 0 0 0 chrX 155327029 155327063 -11323233 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1770 440 134 24 0 chrX 155327404 155327486 -11322810 + GA-rich Low_complexity Low_complexity 1 84 0 5 1770 616 200 0 27 chrX 155327767 155327952 -11322344 + CT-rich Low_complexity Low_complexity 1 180 0 5 1770 709 330 144 9 chrX 155328569 155329147 -11321149 - L1ME3A LINE L1 -18 6155 5500 5 1770 352 291 135 32 chrX 155329559 155329780 -11320516 - MIR SINE MIR -7 255 20 5 1770 685 259 0 20 chrX 155329920 155330070 -11320226 - B1_Mur3 SINE Alu 0 149 3 5 1770 34 24 0 0 chrX 155330228 155330269 -11320027 + AT_rich Low_complexity Low_complexity 1 41 0 5 1770 462 252 167 56 chrX 155330288 155330414 -11319882 + RSINE1 SINE B4 18 157 -8 5 1770 249 333 106 24 chrX 155330659 155330782 -11319514 - MIRc SINE MIR -112 156 24 5 1770 29490 88 18 15 chrX 155332049 155337180 -11313116 + L1Md_F2 LINE L1 446 5586 -297 5 1770 7703 66 5 0 chrX 155337180 155338171 -11312125 + L1Md_F2 LINE L1 5587 6582 0 5 1770 7632 72 7 2 chrX 155338204 155339255 -11311041 + L1_Mm LINE L1 4601 5656 -227 5 1770 33787 36 0 0 chrX 155339253 155344477 -11305819 + L1Md_T LINE L1 269 5589 -297 5 1770 9056 4 0 0 chrX 155344477 155345473 -11304823 + L1Md_T LINE L1 5590 6585 0 5 1770 7439 53 3 2 chrX 155345485 155346409 -11303887 + L1Md_F2 LINE L1 5642 6566 -16 5 1770 363 291 54 12 chrX 155346418 155346585 -11303711 - L1MC5 LINE L1 -74 7887 7714 5 1770 374 274 43 26 chrX 155346691 155346807 -11303489 + MER99 DNA hAT? 2 119 -712 5 1770 1228 305 33 14 chrX 155346807 155347531 -11302765 + L1_Rod LINE L1 5109 5847 0 5 1770 293 238 25 0 chrX 155347814 155347894 -11302402 - MER99 DNA hAT? -589 242 161 5 1770 192 77 0 0 chrX 155347909 155347935 -11302361 + (TTA)n Simple_repeat Simple_repeat 1 26 0 5 1770 368 293 126 16 chrX 155348220 155348411 -11301885 - L1MC5 LINE L1 -547 7414 7203 5 1770 808 287 102 26 chrX 155348462 155348638 -11301658 - B4 SINE B4 -4 288 89 5 1770 327 25 0 0 chrX 155348638 155348678 -11301618 + (TTG)n Simple_repeat Simple_repeat 1 40 0 5 1770 808 287 102 26 chrX 155348678 155348766 -11301530 - B4 SINE B4 -204 88 4 5 1770 987 302 12 21 chrX 155349471 155349803 -11300493 - Lx8 LINE L1 -340 7133 6805 5 1770 752 279 124 32 chrX 155349838 155350153 -11300143 + Lx8 LINE L1 7125 7468 -5 5 1770 183 100 0 0 chrX 155350458 155350488 -11299808 + (TTC)n Simple_repeat Simple_repeat 3 32 0 5 1770 1476 211 102 63 chrX 155351306 155351767 -11298529 + RLTR28B LTR ERVL 3 481 0 5 1770 924 88 203 0 chrX 155351933 155352081 -11298215 + B2_Mm1t SINE B2 2 179 -14 5 1770 288 81 356 79 chrX 155352139 155352240 -11298056 + B2_Mm2 SINE B2 58 186 -9 5 1770 591 258 185 31 chrX 155352246 155352746 -11297550 + L1_Rod LINE L1 3041 3620 -2266 5 1770 352 324 75 34 chrX 155352776 155352923 -11297373 + L1M2 LINE L1 3942 4094 -2049 5 1770 210 114 22 22 chrX 155352923 155352968 -11297328 + (TTATA)n Simple_repeat Simple_repeat 2 46 0 5 1770 376 232 100 14 chrX 155353005 155353145 -11297151 + L1M2 LINE L1 4187 4338 -1805 5 1770 387 92 0 0 chrX 155353422 155353487 -11296809 + (GA)n Simple_repeat Simple_repeat 2 66 0 5 1770 2124 322 48 24 chrX 155353607 155353764 -11296532 + L1_Mur3 LINE L1 4305 4461 -1419 5 1770 2167 188 23 5 chrX 155353764 155354197 -11296099 + RMER10A LTR ERVL 1 441 -1 5 1770 2124 322 48 24 chrX 155354197 155355568 -11294728 + L1_Mur3 LINE L1 4462 5869 -11 5 1770 417 355 21 5 chrX 155355571 155355758 -11294538 + Lx8 LINE L1 7114 7303 -170 5 1770 588 93 0 0 chrX 155355958 155356055 -11294241 + (TC)n Simple_repeat Simple_repeat 2 98 0 5 1770 216 0 0 0 chrX 155356055 155356079 -11294217 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1770 192 311 27 64 chrX 155356570 155356680 -11293616 + L2 LINE L2 2833 2938 -481 5 1770 238 411 0 0 chrX 155357646 155357753 -11292543 - MIRb SINE MIR -135 133 27 5 1770 22 35 0 0 chrX 155358048 155358077 -11292219 + AT_rich Low_complexity Low_complexity 1 29 0 5 1770 238 245 0 0 chrX 155358539 155358588 -11291708 - MIR SINE MIR -168 94 46 5 1770 291 264 161 0 chrX 155359052 155359139 -11291157 + PB1D10 SINE Alu 5 105 -12 5 1770 261 163 0 0 chrX 155359155 155359204 -11291092 + A-rich Low_complexity Low_complexity 1 49 0 5 1770 195 271 111 32 chrX 155359492 155359618 -11290678 - MIR3 SINE MIR -64 144 9 5 1770 187 324 95 61 chrX 155359671 155359819 -11290477 + L4 LINE RTE 274 426 -1603 5 1770 658 270 0 0 chrX 155360627 155360764 -11289532 - B1F SINE Alu -12 137 1 5 1770 378 0 0 0 chrX 155361700 155361742 -11288554 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1770 7396 64 9 0 chrX 155364379 155365658 -11284638 - L1_Mus1 LINE L1 0 6567 5278 5 1770 3845 80 4 2 chrX 155365722 155366236 -11284060 - L1_Mus3 LINE L1 -2 6636 6122 5 1770 931 219 22 11 chrX 155366703 155366888 -11283408 - B3 SINE B2 -5 211 25 5 1770 7449 57 11 11 chrX 155367561 155368525 -11281771 + L1Md_F2 LINE L1 5617 6580 -2 5 1770 212 301 107 12 chrX 155368539 155368623 -11281673 - L3 LINE CR1 -961 3528 3437 5 1770 538 250 0 0 chrX 155368779 155368879 -11281417 - B1_Mur3 SINE Alu -48 101 2 5 1770 461 287 222 5 chrX 155368945 155369134 -11281162 + MLT1G3 LTR MaLR 27 256 -339 5 1770 3682 186 86 69 chrX 155369134 155370021 -11280275 - RMER19B LTR ERVK 0 902 1 5 1770 450 303 90 0 chrX 155370071 155370226 -11280070 + MLT1G3 LTR MaLR 416 584 -11 5 1770 960 206 56 5 chrX 155370236 155370431 -11279865 + B3 SINE B2 6 210 -6 5 1770 417 169 13 0 chrX 155370946 155371023 -11279273 + MADE2 DNA Mariner 1 78 -2 5 1770 478 262 101 34 chrX 155371705 155371883 -11278413 - RMER30 DNA MER1_type -1 201 12 5 1770 549 349 44 44 chrX 155371890 155372362 -11277934 - L2a LINE L2 -53 3373 2904 5 1770 720 252 17 70 chrX 155372570 155372746 -11277550 + ID_B1 SINE B4 4 178 -46 5 1770 1086 95 0 13 chrX 155372746 155372760 -11277536 - B1_Mus1 SINE Alu 0 148 136 5 1770 246 62 0 0 chrX 155372760 155372792 -11277504 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 1770 1086 95 0 13 chrX 155372792 155372927 -11277369 - B1_Mus1 SINE Alu -13 135 1 5 1770 720 252 17 70 chrX 155372927 155372980 -11277316 + ID_B1 SINE B4 179 221 -3 5 1770 704 130 0 1 chrX 155373002 155373108 -11277188 + B2_Mm2 SINE B2 1 105 -111 5 1770 225 0 0 0 chrX 155373108 155373133 -11277163 + (GGA)n Simple_repeat Simple_repeat 1 25 0 5 1770 699 185 0 25 chrX 155373133 155373148 -11277148 + B3 SINE B2 106 119 -97 5 1770 234 91 0 0 chrX 155373305 155373338 -11276958 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 1770 461 233 26 33 chrX 155373529 155373687 -11276609 - L1MA4 LINE L1 -226 5930 5757 5 1770 514 268 116 13 chrX 155374014 155374169 -11276127 + B3A SINE B2 1 171 -27 5 1770 237 33 0 0 chrX 155374184 155374214 -11276082 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 1770 230 261 101 0 chrX 155374249 155374318 -11275978 + B1_Mur1 SINE Alu 73 148 -1 5 1770 4555 163 41 61 chrX 155374336 155375256 -11275040 + RMER19B LTR ERVK 1 902 0 5 1770 180 273 36 18 chrX 155375427 155375483 -11274813 + MIRm SINE MIR 99 155 -121 5 1770 224 310 0 0 chrX 155375562 155375620 -11274676 + MER5B DNA MER1_type 121 178 0 5 1770 186 338 9 31 chrX 155375778 155375888 -11274408 + MIRb SINE MIR 152 260 -8 5 1770 1380 81 0 11 chrX 155376914 155377102 -11273194 - B2_Mm2 SINE B2 -8 187 2 5 1770 242 263 75 75 chrX 155377868 155377975 -11272321 + MLT1H2 LTR MaLR 377 483 -6 5 1770 373 351 79 39 chrX 155379836 155380014 -11270282 - MIR SINE MIR -71 191 7 5 1770 328 239 14 0 chrX 155380092 155380163 -11270133 - ID4 SINE ID -9 74 3 5 1770 276 348 86 9 chrX 155380174 155380290 -11270006 - ID_B1 SINE B4 -2 222 98 5 1770 2788 148 30 11 chrX 155380303 155380538 -11269758 - Lx2 LINE L1 0 6997 6753 5 1770 432 0 0 0 chrX 155380538 155380586 -11269710 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 5 1770 2788 148 30 11 chrX 155380586 155380823 -11269473 - Lx2 LINE L1 -245 6752 6516 5 1770 641 186 210 110 chrX 155380962 155381125 -11269171 - B3 SINE B2 -17 199 3 6 1770 210 71 0 0 chrX 155381952 155381980 -11268316 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 6 1770 548 269 0 0 chrX 155382008 155382127 -11268169 + B1F SINE Alu 10 128 -21 6 1770 653 235 0 0 chrX 155382130 155382249 -11268047 + B1_Mur4 SINE Alu 1 119 -31 6 1770 345 93 0 0 chrX 155382297 155382351 -11267945 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 1770 1170 37 0 0 chrX 155382665 155382800 -11267496 + B1_Mus2 SINE Alu 1 135 -12 6 1770 264 30 0 0 chrX 155382802 155382835 -11267461 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 6 1770 1121 284 55 6 chrX 155382966 155383278 -11267018 + MTE2b LTR MaLR 1 327 -52 6 1770 312 27 0 0 chrX 155383281 155383318 -11266978 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 1770 214 186 0 0 chrX 155383346 155383389 -11266907 + (TA)n Simple_repeat Simple_repeat 2 44 0 6 1770 513 228 22 0 chrX 155383450 155383542 -11266754 - B3A SINE B2 -102 96 3 6 1770 307 245 37 152 chrX 155383740 155383957 -11266339 - Lx8 LINE L1 0 7473 7282 6 1770 1006 128 7 13 chrX 155384906 155385056 -11265240 + B1_Mur3 SINE Alu 1 149 0 6 1770 905 233 66 23 chrX 155385716 155386025 -11264271 - ORR1D1 LTR MaLR 0 378 26 6 1770 184 200 289 13 chrX 155386363 155386439 -11263857 - MIR SINE MIR -30 232 136 6 1770 228 128 0 41 chrX 155387154 155387203 -11263093 + A-rich Low_complexity Low_complexity 1 47 0 6 1770 386 20 20 0 chrX 155387445 155387496 -11262800 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1770 490 312 7 7 chrX 155387496 155387641 -11262655 - B3A SINE B2 -51 147 3 6 1770 23 68 0 0 chrX 155387679 155387723 -11262573 + AT_rich Low_complexity Low_complexity 1 44 0 6 1770 33658 28 1 0 chrX 155387806 155392691 -11257605 - L1Md_T LINE L1 0 6582 1696 6 1770 24 0 0 0 chrX 155392813 155392837 -11257459 + AT_rich Low_complexity Low_complexity 1 24 0 6 1770 302 318 198 4 chrX 155392947 155393190 -11257106 - L1M4 LINE L1 -2229 3917 3628 6 1770 2172 80 194 5 chrX 155393693 155394069 -11256227 + RLTR47_MM LTR ERV1 1 447 -85 6 1770 6195 158 69 23 chrX 155394225 155395387 -11254909 - Lx4B LINE L1 -7 7051 5837 6 1770 1066 84 0 16 chrX 155395389 155395571 -11254725 - L1_Mur1 LINE L1 -554 5332 5154 6 1770 3012 107 14 5 chrX 155395571 155396014 -11254282 + Lx3B LINE L1 6526 6972 -1 6 1770 446 256 41 57 chrX 155396042 155396286 -11254010 + L1MA8 LINE L1 5099 5338 -802 6 1770 353 256 33 9 chrX 155396294 155396442 -11253854 + L1MA8 LINE L1 5457 5610 -681 6 1770 617 267 58 52 chrX 155396530 155396704 -11253592 + B4 SINE B4 118 292 0 6 1770 602 239 22 31 chrX 155396732 155396920 -11253376 + L1MA8 LINE L1 5587 5778 -411 6 1770 2225 121 76 97 chrX 155396920 155397405 -11252891 - IAPLTR2_Mm LTR ERVK 0 475 1 6 1770 602 239 22 31 chrX 155397405 155397445 -11252851 + L1MA8 LINE L1 5779 5813 -376 6 1770 1153 112 0 0 chrX 155397447 155397625 -11252671 + L1_Mm LINE L1 4550 4727 -1156 6 1770 2045 129 6 6 chrX 155397625 155397936 -11252360 - RLTR10E LTR ERVK 0 311 1 6 1770 3725 142 47 1 chrX 155397936 155398592 -11251704 - IAPEY3-int LTR ERVK 0 7680 6995 6 1770 1495 80 102 0 chrX 155398596 155398822 -11251474 - IAP-d-int LTR ERVK -1287 5255 5007 6 1770 332 158 0 0 chrX 155398822 155398879 -11251417 - IAP-d-int LTR ERVK -6039 503 447 6 1770 2278 51 3 0 chrX 155399093 155399385 -11250911 + L1_Mm LINE L1 5391 5683 -200 6 1770 5199 57 21 12 chrX 155399385 155400062 -11250234 + L1Md_F2 LINE L1 5899 6581 -1 6 1770 643 227 237 6 chrX 155400062 155400399 -11249897 + L1MA8 LINE L1 5820 6234 -57 6 1770 496 264 56 8 chrX 155400506 155400632 -11249664 + B1F SINE Alu 12 143 -6 6 1770 216 287 75 75 chrX 155400645 155400739 -11249557 - L3 LINE CR1 -940 3549 3456 6 1770 410 329 33 37 chrX 155400790 155401005 -11249291 + L1ME1 LINE L1 5880 6093 -86 6 1770 524 302 7 7 chrX 155401054 155401194 -11249102 - RSINE1 SINE B4 -17 148 9 6 1770 229 425 46 43 chrX 155401339 155401666 -11248630 - L3 LINE CR1 -1210 3279 2952 6 1770 432 269 39 0 chrX 155402618 155402722 -11247574 - PB1D9 SINE Alu -6 114 7 6 1770 3700 164 35 1 chrX 155402724 155403389 -11246907 + Lx LINE L1 5968 6654 0 6 1770 540 254 57 70 chrX 155403391 155403548 -11246748 + B3A SINE B2 27 181 -17 6 1770 234 0 0 0 chrX 155403552 155403578 -11246718 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 1770 304 350 14 21 chrX 155403791 155403931 -11246365 - L3 LINE CR1 -260 4229 4091 6 1770 1652 180 108 27 chrX 155405314 155405535 -11244761 + ORR1B2 LTR MaLR 1 257 -110 6 1770 2065 158 31 14 chrX 155405535 155405894 -11244402 - ORR1B2 LTR MaLR 0 367 3 6 1770 1652 180 108 27 chrX 155405894 155406004 -11244292 + ORR1B2 LTR MaLR 258 359 -8 6 1770 959 226 148 47 chrX 155406040 155406093 -11244203 + L1MA8 LINE L1 5588 5649 -642 6 1770 340 20 41 0 chrX 155406093 155406142 -11244154 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 1770 959 226 148 47 chrX 155406142 155406260 -11244036 + L1MA8 LINE L1 5650 5768 -523 6 1770 3239 47 3 0 chrX 155406260 155406644 -11243652 - IAPEY_LTR LTR ERVK 0 385 1 6 1770 959 226 148 47 chrX 155406644 155407006 -11243290 + L1MA8 LINE L1 5769 6176 -115 6 1770 648 192 58 0 chrX 155407102 155407222 -11243074 + B3 SINE B2 1 127 -89 6 1770 321 344 0 11 chrX 155408309 155408401 -11241895 + RSINE1 SINE B4 3 93 -72 6 1770 1257 104 15 35 chrX 155408401 155408600 -11241696 + B2_Mm2 SINE B2 1 195 0 6 1770 278 350 0 0 chrX 155408591 155408671 -11241625 + RSINE1 SINE B4 84 163 -2 6 1770 530 170 123 0 chrX 155410190 155410296 -11240000 + PB1D9 SINE Alu 1 119 -1 6 1770 363 44 0 0 chrX 155410403 155410448 -11239848 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1770 313 195 127 51 chrX 155410449 155410606 -11239690 + Lx8 LINE L1 7305 7473 0 6 1770 2724 266 139 21 chrX 155410751 155411229 -11239067 + L1MA8 LINE L1 4203 4755 -1125 6 1770 234 0 0 0 chrX 155411229 155411255 -11239041 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 1770 366 80 0 0 chrX 155411255 155411304 -11238992 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 1770 2724 267 136 21 chrX 155411304 155412347 -11237949 + L1MA8 LINE L1 4756 5953 -338 6 1770 1251 91 0 6 chrX 155412467 155412644 -11237652 + B2_Mm2 SINE B2 1 176 -19 6 1770 254 250 11 87 chrX 155412821 155412886 -11237410 - MER2 DNA MER2_type -54 291 232 6 1770 983 241 38 134 chrX 155412886 155413303 -11236993 + MTE2a LTR MaLR 1 377 -2 6 1770 254 250 11 87 chrX 155413303 155413329 -11236967 - MER2 DNA MER2_type -114 231 207 6 1770 356 216 31 10 chrX 155413573 155413671 -11236625 + L1MD1 LINE L1 6125 6224 -18 6 1770 189 0 0 0 chrX 155414940 155414961 -11235335 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1770 900 242 91 18 chrX 155415470 155415744 -11234552 + MER58B DNA MER1_type 37 330 -11 6 1770 383 318 56 30 chrX 155415761 155415809 -11234487 + MER3 DNA MER1_type 1 53 -156 6 1770 768 230 41 16 chrX 155415809 155416003 -11234293 - MER3 DNA MER1_type 0 209 11 6 1770 509 269 6 0 chrX 155416133 155416304 -11233992 + CT-rich Low_complexity Low_complexity 3 174 0 6 1770 246 111 0 0 chrX 155416304 155416340 -11233956 + (TC)n Simple_repeat Simple_repeat 2 37 0 6 1770 343 266 32 0 chrX 155416347 155416441 -11233855 - PB1D10 SINE Alu -16 101 5 6 1770 252 0 0 0 chrX 155416585 155416613 -11233683 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 6 1770 2608 190 23 33 chrX 155416630 155417147 -11233149 - Lx5 LINE L1 -75 6975 6464 6 1770 14232 19 0 0 chrX 155417147 155419545 -11230751 - L1Md_A LINE L1 -1 6581 4184 6 1770 1337 181 75 0 chrX 155419545 155419811 -11230485 - Lx5 LINE L1 -576 6474 6189 6 1770 654 238 64 52 chrX 155419811 155419984 -11230312 - MTEa LTR MaLR -14 365 191 6 1770 457 221 0 44 chrX 155419980 155420070 -11230226 - MTEa LTR MaLR -290 89 4 6 1770 241 394 153 20 chrX 155420072 155420274 -11230022 - LTR16C LTR ERVL -150 339 111 6 1770 218 146 54 18 chrX 155420500 155420556 -11229740 + (TTATA)n Simple_repeat Simple_repeat 1 58 0 6 1770 1549 72 0 9 chrX 155420607 155420818 -11229478 - MTB_Mm LTR MaLR -198 209 1 6 1770 437 312 125 65 chrX 155421545 155421881 -11228415 - MLT1A0 LTR MaLR -9 356 1 6 1770 465 304 100 65 chrX 155421894 155422323 -11227973 - MLT1J1 LTR MaLR 0 444 1 6 1770 554 285 27 98 chrX 155423523 155423706 -11226590 + ID_B1 SINE B4 38 207 -17 6 1770 378 0 0 0 chrX 155423729 155423771 -11226525 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1770 288 0 0 0 chrX 155424301 155424333 -11225963 + (TC)n Simple_repeat Simple_repeat 1 32 0 6 1770 207 0 0 0 chrX 155424333 155424355 -11225941 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 1770 333 0 0 0 chrX 155424355 155424392 -11225904 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1770 3314 11 0 0 chrX 155424402 155424777 -11225519 + L1Md_A LINE L1 6208 6582 0 6 1770 805 279 59 15 chrX 155425578 155425916 -11224380 - L1ME3A LINE L1 -116 6057 5705 6 1770 326 279 81 0 chrX 155427299 155427410 -11222886 - L2a LINE L2 -5 3421 3302 6 1770 285 319 36 0 chrX 155427932 155428070 -11222226 - L1ME1 LINE L1 0 6179 6037 6 1770 275 65 0 21 chrX 155428857 155428904 -11221392 + (CAAAA)n Simple_repeat Simple_repeat 5 50 0 6 1770 180 0 0 0 chrX 155428908 155428928 -11221368 + (CTAA)n Simple_repeat Simple_repeat 1 20 0 6 1770 198 0 0 0 chrX 155429481 155429503 -11220793 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 6 1770 1180 49 0 0 chrX 155429517 155429660 -11220636 + B1_Mus1 SINE Alu 4 146 -2 6 1770 189 0 0 0 chrX 155429695 155429716 -11220580 + (TA)n Simple_repeat Simple_repeat 1 21 0 6 1770 238 294 36 81 chrX 155429748 155429762 -11220534 + MER5A1 DNA MER1_type 61 72 -94 6 1770 285 29 0 0 chrX 155429762 155429796 -11220500 + (GA)n Simple_repeat Simple_repeat 1 34 0 6 1770 238 294 36 81 chrX 155429796 155429892 -11220404 + MER5A1 DNA MER1_type 73 166 0 6 1770 295 339 83 0 chrX 155430044 155430153 -11220143 + L2b LINE L2 3248 3365 -10 6 1770 589 192 249 6 chrX 155430188 155430361 -11219935 + B3 SINE B2 2 216 0 6 1770 698 219 137 126 chrX 155430369 155430552 -11219744 + B3 SINE B2 2 186 -9 6 1770 455 369 65 8 chrX 155430908 155431154 -11219142 + MLT1F LTR MaLR 1 260 -288 6 1770 355 331 75 0 chrX 155431423 155431556 -11218740 - MLT1J2 LTR MaLR -305 143 1 6 1770 219 281 53 0 chrX 155431923 155431980 -11218316 + L2c LINE L2 3254 3313 -74 6 1770 801 207 0 40 chrX 155433558 155433709 -11216587 - RSINE1 SINE B4 0 165 21 6 1770 658 295 0 0 chrX 155434446 155434585 -11215711 + RSINE1 SINE B4 6 144 -21 7 1770 225 0 0 0 chrX 155434587 155434612 -11215684 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 1770 313 260 79 10 chrX 155434613 155434714 -11215582 - MER5C DNA MER1_type -199 114 7 7 1770 315 0 0 0 chrX 155435052 155435087 -11215209 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 7 1770 202 229 65 116 chrX 155435235 155435373 -11214923 + MIR SINE MIR 7 137 -125 7 1770 2407 82 44 3 chrX 155435373 155435715 -11214581 + Lx LINE L1 6295 6650 -4 7 1770 417 65 97 0 chrX 155435722 155435784 -11214512 + RLTR14 LTR ERV1 1 68 -314 7 1770 1181 140 17 0 chrX 155435782 155435961 -11214335 + RLTR14 LTR ERV1 200 381 -1 7 1770 765 186 7 33 chrX 155437632 155437782 -11212514 + B1_Mus1 SINE Alu 1 146 -2 7 1770 183 129 0 0 chrX 155437783 155437814 -11212482 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 1770 341 250 47 12 chrX 155437951 155438036 -11212260 + LTR16A LTR ERVL 364 451 0 7 1770 295 73 0 35 chrX 155439180 155439237 -11211059 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1770 714 278 37 0 chrX 155439240 155439402 -11210894 - B4A SINE B4 -4 288 121 7 1770 893 294 30 22 chrX 155439989 155440260 -11210036 + B4A SINE B4 1 273 -19 7 1770 282 354 132 6 chrX 155440733 155440915 -11209381 - MamGypLTR1c LTR Gypsy -23 790 586 7 1770 24 32 0 0 chrX 155441027 155441058 -11209238 + AT_rich Low_complexity Low_complexity 1 31 0 7 1770 2172 227 24 20 chrX 155441131 155441684 -11208612 - Lx7 LINE L1 -349 7347 6793 7 1770 249 282 77 0 chrX 155441695 155441773 -11208523 - B1F SINE Alu -11 138 55 7 1770 1018 102 0 0 chrX 155441809 155441956 -11208340 - Lx3C LINE L1 -231 6745 6599 7 1770 3219 118 35 2 chrX 155441954 155442473 -11207823 + Lx3B LINE L1 5853 6388 -585 7 1770 346 118 0 56 chrX 155442469 155442551 -11207745 + Lx LINE L1 6561 6629 -25 7 1770 315 0 0 0 chrX 155442555 155442590 -11207706 + (TAGA)n Simple_repeat Simple_repeat 2 36 0 7 1770 1409 126 13 17 chrX 155442590 155442825 -11207471 + Lx3B LINE L1 6376 6609 -367 7 1770 812 332 83 55 chrX 155443109 155443542 -11206754 - LTR16A1 LTR ERVL 0 456 12 7 1770 8003 5 0 0 chrX 155443747 155444674 -11205622 - L1Md_T LINE L1 0 6582 5656 7 1770 2832 15 3 0 chrX 155444675 155445013 -11205283 + L1Md_T LINE L1 5294 5632 -251 7 1770 5193 24 32 6 chrX 155445052 155445680 -11204616 + L1Md_F3 LINE L1 5927 6570 -14 7 1770 27 29 0 0 chrX 155446122 155446156 -11204140 + AT_rich Low_complexity Low_complexity 1 34 0 7 1770 725 111 23 31 chrX 155446245 155446375 -11203921 - Lx2A LINE L1 0 7008 6880 7 1770 324 0 0 0 chrX 155446409 155446445 -11203851 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1770 2700 283 38 30 chrX 155446445 155447399 -11202897 - Lx8 LINE L1 -146 7327 6367 7 1770 4053 69 0 4 chrX 155447965 155448486 -11201810 + L1_Mus2 LINE L1 6047 6565 -1 7 221 36844 8 1 2 chrX 155448505 155454661 -11195635 + L1Md_A LINE L1 1 5586 -297 7 1771 9058 3 0 0 chrX 155454661 155455657 -11194639 + L1Md_A LINE L1 5587 6582 0 7 1771 184 274 0 125 chrX 155455787 155455883 -11194413 - L2c LINE L2 0 3387 3304 7 1771 5536 98 57 23 chrX 155455960 155456814 -11193482 - L1_Mus4 LINE L1 -6 6630 5748 7 1771 382 58 3 0 chrX 155456814 155456871 -11193425 + Lx LINE L1 5709 5765 -1695 7 1771 440 268 100 72 chrX 155457677 155457967 -11192329 + L1ME1 LINE L1 5840 6137 -42 7 1771 454 248 38 9 chrX 155458533 155458639 -11191657 + PB1D10 SINE Alu 2 110 -7 7 1771 246 62 0 0 chrX 155458641 155458673 -11191623 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 7 1771 632 291 14 21 chrX 155458697 155458841 -11191455 + RSINE1 SINE B4 23 165 0 7 1771 681 295 52 5 chrX 155459225 155459419 -11190877 + MER20 DNA MER1_type 16 218 -1 7 1771 453 36 0 0 chrX 155461181 155461236 -11189060 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 7 1771 4504 172 23 36 chrX 155462441 155463361 -11186935 + RMER13B LTR ERVK 1 908 0 7 1771 516 16 0 0 chrX 155464121 155464182 -11186114 + (GA)n Simple_repeat Simple_repeat 1 61 0 7 1771 411 377 17 40 chrX 155464245 155464324 -11185972 + L1MC4 LINE L1 7155 7231 -811 7 1771 180 0 0 0 chrX 155464324 155464344 -11185952 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 7 1771 411 377 17 40 chrX 155464344 155464565 -11185731 + L1MC4 LINE L1 7232 7448 -594 7 1771 362 246 156 16 chrX 155464888 155464904 -11185392 - B1F SINE Alu -3 146 132 7 1771 228 35 0 0 chrX 155464904 155464933 -11185363 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1771 362 246 156 16 chrX 155464933 155465005 -11185291 - B1F SINE Alu -18 131 56 7 1771 369 0 0 0 chrX 155465005 155465046 -11185250 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1771 362 246 156 16 chrX 155465046 155465084 -11185212 - B1F SINE Alu -94 55 3 7 1771 383 207 172 0 chrX 155465156 155465243 -11185053 + MER5A1 DNA MER1_type 14 115 -51 7 1771 10457 59 6 0 chrX 155465340 155466741 -11183555 + L1Md_F2 LINE L1 4176 5585 -298 7 1771 8434 34 3 1 chrX 155466742 155467735 -11182561 + L1Md_F2 LINE L1 5587 6581 -1 7 1771 559 273 135 40 chrX 155468137 155468494 -11181802 + MLT1C LTR MaLR 55 390 0 7 1771 597 296 73 5 chrX 155468564 155468768 -11181528 - MIRb SINE MIR -26 242 25 7 1771 186 103 0 0 chrX 155469096 155469125 -11181171 + (TTTTG)n Simple_repeat Simple_repeat 5 33 0 7 1771 435 279 73 16 chrX 155469999 155470123 -11180173 - 7SK RNA RNA -200 131 1 7 1771 196 74 0 0 chrX 155470124 155470151 -11180145 - MIR SINE MIR -67 141 115 7 1771 2328 289 108 44 chrX 155470309 155470440 -11179856 + Lx9 LINE L1 6322 6454 -1190 7 1771 279 0 0 0 chrX 155470440 155470471 -11179825 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 1771 2328 289 108 44 chrX 155470471 155471568 -11178728 + Lx9 LINE L1 6455 7628 -16 7 1771 389 360 70 41 chrX 155471607 155471956 -11178340 - L2a LINE L2 -208 3167 2817 7 1771 28 61 0 0 chrX 155471993 155472042 -11178254 + AT_rich Low_complexity Low_complexity 1 49 0 7 1771 409 269 97 0 chrX 155472064 155472157 -11178139 - PB1D10 SINE Alu -10 107 6 7 1771 341 329 159 8 chrX 155472160 155472405 -11177891 - L2a LINE L2 -598 2821 2540 7 1771 1076 318 81 15 chrX 155472702 155473110 -11177186 + MLT1G1 LTR MaLR 135 569 -10 7 1771 547 352 88 14 chrX 155473124 155473409 -11176887 - MLT1I LTR MaLR 0 411 106 7 1771 484 296 89 108 chrX 155473455 155473815 -11176481 + ORR1E LTR MaLR 1 353 -6 7 1771 808 57 0 24 chrX 155473846 155473971 -11176325 + L1Md_T LINE L1 6461 6582 0 7 1771 436 315 258 19 chrX 155474278 155474806 -11175490 - L2a LINE L2 -946 2473 1820 7 1771 320 86 16 65 chrX 155474828 155474880 -11175416 + B1_Mm SINE Alu 89 138 -9 7 1771 303 49 0 0 chrX 155474880 155474921 -11175375 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1771 208 135 0 0 chrX 155474930 155474967 -11175329 + (A)n Simple_repeat Simple_repeat 1 37 0 7 1771 1481 114 91 0 chrX 155475147 155475238 -11175058 - Lx LINE L1 -20 6634 6536 7 1771 189 0 0 0 chrX 155475238 155475259 -11175037 + (CCCA)n Simple_repeat Simple_repeat 1 21 0 7 1771 1481 114 91 0 chrX 155475259 155475431 -11174865 - Lx LINE L1 -119 6535 6349 7 1771 491 31 0 15 chrX 155475588 155475654 -11174642 + (GA)n Simple_repeat Simple_repeat 2 66 0 7 1771 8724 118 23 37 chrX 155475688 155477262 -11173034 - Lx4A LINE L1 -1 7057 5500 7 1771 1023 265 40 7 chrX 155477317 155477594 -11172702 - B4 SINE B4 -4 288 3 7 1771 348 374 131 36 chrX 155478120 155478342 -11171954 - MamGypLTR2b LTR Gypsy -533 389 147 7 1771 448 269 73 66 chrX 155478356 155478507 -11171789 + MER63A DNA AcHobo 9 160 -50 7 1771 793 251 38 5 chrX 155478912 155479096 -11171200 + B3 SINE B2 15 204 -12 7 1771 317 259 12 12 chrX 155479353 155479439 -11170857 - MER5B DNA MER1_type -6 172 87 7 1771 319 291 32 64 chrX 155479504 155479629 -11170667 - B1F SINE Alu -2 147 27 7 1771 427 294 22 22 chrX 155480973 155481112 -11169184 - MER20B DNA MER1_type -643 140 2 7 1771 564 271 24 55 chrX 155482189 155482353 -11167943 + RSINE1 SINE B4 3 161 -4 7 1771 21 0 0 0 chrX 155482368 155482389 -11167907 + AT_rich Low_complexity Low_complexity 1 21 0 7 1771 384 359 25 39 chrX 155482401 155482604 -11167692 + L1ME3 LINE L1 5962 6161 -1 7 1771 3090 113 14 0 chrX 155482612 155483106 -11167190 - Lx2 LINE L1 -1009 4868 4368 7 1771 8338 129 23 11 chrX 155483106 155485227 -11165069 + Lx2 LINE L1 4850 6997 0 7 1771 225 282 54 108 chrX 155486262 155486297 -11163999 - B3A SINE B2 -1 197 7 7 1771 465 247 24 102 chrX 155486297 155486464 -11163832 - RSINE1 SINE B4 -4 161 8 7 1771 234 0 0 0 chrX 155486532 155486558 -11163738 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 7 1771 440 369 5 19 chrX 155486668 155486875 -11163421 - LTR16A1 LTR ERVL -2 454 251 7 1771 986 270 55 32 chrX 155486981 155487301 -11162995 - MER63B DNA AcHobo 0 436 109 7 1771 2135 254 89 12 chrX 155487301 155487906 -11162390 + MER82 DNA MER2_type 1 652 -1 7 1771 194 353 74 25 chrX 155488045 155488167 -11162129 + L2b LINE L2 3248 3375 0 7 1771 394 250 0 23 chrX 155488339 155488425 -11161871 + B4 SINE B4 2 85 -207 7 1771 1731 127 3 58 chrX 155488438 155488781 -11161515 + Lx4A LINE L1 1645 1968 -3909 7 1771 6259 53 1 2 chrX 155488779 155490054 -11160242 - L1Md_F2 LINE L1 -239 6343 5070 7 1771 1157 128 49 0 chrX 155490055 155490259 -11160037 + L1Md_F2 LINE L1 6348 6561 -21 7 1771 183 42 0 0 chrX 155490260 155490284 -11160012 + (TAA)n Simple_repeat Simple_repeat 1 24 0 7 1771 6250 98 31 6 chrX 155490284 155491301 -11158995 + Lx4A LINE L1 1953 2996 -2881 7 1771 7100 116 5 16 chrX 155491294 155492740 -11157556 + Lx4A LINE L1 4724 6156 -902 7 1771 3271 144 12 0 chrX 155492741 155493248 -11157048 + Lx4A LINE L1 6536 7048 -10 7 1771 603 0 0 0 chrX 155493262 155493329 -11156967 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 7 1771 885 301 10 19 chrX 155493332 155493539 -11156757 + B4 SINE B4 88 292 0 7 1771 693 256 6 11 chrX 155494016 155494190 -11156106 - Tigger12c DNA MER2_type -27 707 535 7 1771 249 353 146 6 chrX 155494193 155494364 -11155932 - Tigger12c DNA MER2_type -448 286 92 7 1771 320 399 15 20 chrX 155495106 155495303 -11154993 + L1M5 LINE L1 5542 5737 -436 7 1771 451 317 26 53 chrX 155495400 155495590 -11154706 + B3A SINE B2 1 185 -13 7 1771 857 135 43 0 chrX 155495700 155495841 -11154455 - B1_Mus1 SINE Alu -1 147 1 7 1771 2200 82 62 6 chrX 155496045 155496365 -11153931 - Lx3A LINE L1 -2 6979 6642 7 1771 1072 43 50 0 chrX 155496370 155496510 -11153786 - B2_Mm2 SINE B2 -47 148 2 7 1771 539 323 223 23 chrX 155496848 155497327 -11152969 + MLT1G LTR MaLR 15 589 -2 7 1771 584 231 40 11 chrX 155497449 155497624 -11152672 + L1MA6 LINE L1 6120 6299 -1 7 1771 207 0 0 0 chrX 155497649 155497672 -11152624 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 8 1771 237 326 79 0 chrX 155498144 155498233 -11152063 - MIR3 SINE MIR -11 197 102 8 1771 198 167 0 0 chrX 155498248 155498284 -11152012 + A-rich Low_complexity Low_complexity 1 36 0 8 1771 436 297 101 24 chrX 155498354 155498523 -11151773 + MIRb SINE MIR 25 206 -62 8 1771 396 271 169 47 chrX 155498543 155498756 -11151540 - MLT1L LTR MaLR -172 438 200 8 1771 321 253 0 0 chrX 155499431 155499506 -11150790 - MIR SINE MIR -5 257 183 8 1771 383 263 17 26 chrX 155500637 155500754 -11149542 - MER5A DNA MER1_type -45 144 29 1 1771 734 238 127 66 chrX 155500875 155501139 -11149157 + B4 SINE B4 3 271 -21 2 1771 354 23 0 0 chrX 155501145 155501188 -11149108 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1771 511 246 0 81 chrX 155501309 155501433 -11148863 + PB1D7 SINE Alu 1 114 -6 4 1771 346 273 83 35 chrX 155501589 155501733 -11148563 - MIRc SINE MIR -30 238 88 5 1771 453 352 35 15 chrX 155501853 155502055 -11148241 - MIR SINE MIR -10 252 47 6 1771 355 254 144 27 chrX 155502487 155502633 -11147663 - MIRc SINE MIR -13 255 93 7 1771 267 31 0 0 chrX 155503799 155503831 -11146465 + (TA)n Simple_repeat Simple_repeat 2 33 0 8 1771 184 185 18 18 chrX 155503831 155503886 -11146410 + CT-rich Low_complexity Low_complexity 3 57 0 9 1771 530 303 32 45 chrX 155504453 155504674 -11145622 + LTR33A LTR ERVL 303 520 0 1 1771 1082 89 0 20 chrX 155504801 155504950 -11145346 + B1_Mm SINE Alu 2 147 0 1 1771 222 37 0 0 chrX 155504951 155504978 -11145318 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1 1771 360 344 113 15 chrX 155505194 155505389 -11144907 + MIRb SINE MIR 8 221 -47 1 1771 210 37 0 0 chrX 155505858 155505885 -11144411 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1 1771 1194 37 0 0 chrX 155506630 155506765 -11143531 + B1_Mus1 SINE Alu 2 136 -12 1 1771 243 0 0 0 chrX 155506766 155506793 -11143503 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1771 862 287 130 27 chrX 155506995 155507403 -11142893 - Tigger13a DNA MER2_type -255 516 67 1 1771 691 265 6 18 chrX 155507516 155507681 -11142615 - RSINE1 SINE B4 0 165 3 1 1771 962 158 178 0 chrX 155507886 155508088 -11142208 + RMER4B LTR ERVK 1 238 -347 1 1771 5241 151 36 19 chrX 155508088 155509005 -11141291 + Lx4B LINE L1 6083 7015 -43 2 1771 279 0 0 0 chrX 155509017 155509048 -11141248 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2 1771 498 104 21 10 chrX 155509074 155509171 -11141125 + (CTG)n Simple_repeat Simple_repeat 1 98 0 2 1771 527 194 26 224 chrX 155509172 155509404 -11140892 + RMER4B LTR ERVK 343 588 -23 1 1771 668 331 26 79 chrX 155509418 155509723 -11140573 - MLT1A0 LTR MaLR -76 289 1 2 1771 339 25 0 0 chrX 155510048 155510088 -11140208 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 1771 405 0 0 0 chrX 155510088 155510132 -11140164 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 1771 668 301 30 10 chrX 155510752 155510950 -11139346 + MER58A DNA MER1_type 3 204 -20 2 1771 306 0 0 0 chrX 155510952 155510986 -11139310 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1771 314 298 92 46 chrX 155510990 155511099 -11139197 + PB1D7 SINE Alu 2 115 -5 2 1771 609 83 0 0 chrX 155511124 155511208 -11139088 + (GGGA)n Simple_repeat Simple_repeat 2 85 0 2 1771 309 206 186 0 chrX 155512408 155512510 -11137786 + MER5A1 DNA MER1_type 45 165 -1 3 1771 805 203 0 63 chrX 155512516 155512674 -11137622 + B1_Mur4 SINE Alu 1 148 -2 3 1771 307 228 89 0 chrX 155512757 155512836 -11137460 + LTR50 LTR ERVL 7 92 -703 3 1771 828 290 154 9 chrX 155512852 155513196 -11137100 + LTR50 LTR ERVL 402 795 0 3 1771 564 312 37 94 chrX 155513206 155513503 -11136793 + B4A SINE B4 10 289 -3 3 1771 5079 116 15 6 chrX 155514208 155514934 -11135362 - Lx LINE L1 -7 6647 5915 3 1771 504 59 0 0 chrX 155514996 155515064 -11135232 + (CA)n Simple_repeat Simple_repeat 2 69 0 3 1771 742 225 23 17 chrX 155516046 155516218 -11134078 - MER5A DNA MER1_type -14 175 3 3 1771 746 289 130 16 chrX 155516252 155516498 -11133798 + B4 SINE B4 1 274 -18 3 1771 429 20 0 0 chrX 155516511 155516561 -11133735 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1771 436 330 28 28 chrX 155516570 155516751 -11133545 + MLT1J LTR MaLR 34 214 -298 3 1771 301 219 24 18 chrX 155516783 155516864 -11133432 + MLT1J LTR MaLR 22 104 -550 4 1771 275 289 72 0 chrX 155516977 155517060 -11133236 + MLT1F1 LTR MaLR 399 487 -82 4 1771 334 299 62 16 chrX 155517131 155517260 -11133036 + MLT1J LTR MaLR 230 364 -148 4 1771 473 255 156 46 chrX 155517411 155517508 -11132788 - MIR SINE MIR -5 257 146 4 1771 207 0 0 0 chrX 155517508 155517531 -11132765 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 4 1771 473 255 156 46 chrX 155517531 155517651 -11132645 - MIR SINE MIR -117 145 17 4 1771 281 254 0 0 chrX 155517665 155517720 -11132576 - MIRb SINE MIR -9 259 205 4 1771 251 387 16 16 chrX 155517713 155517834 -11132462 - MIRm SINE MIR -129 147 27 4 1771 303 346 39 0 chrX 155517908 155518038 -11132258 - MER5A1 DNA MER1_type 0 166 32 4 1771 250 188 127 28 chrX 155518284 155518355 -11131941 - MIR3 SINE MIR -53 155 78 4 1771 1267 114 166 0 chrX 155518937 155519130 -11131166 - URR1B DNA MER1_type 0 225 1 4 1771 191 402 0 0 chrX 155519318 155519400 -11130896 - L2c LINE L2 -186 3201 3120 4 1771 348 244 42 34 chrX 155519958 155520058 -11130238 + MER103 DNA DNA 8 110 -56 5 1771 531 0 0 0 chrX 155520058 155520117 -11130179 + (GA)n Simple_repeat Simple_repeat 2 60 0 5 1771 348 244 42 34 chrX 155520117 155520135 -11130161 + MER103 DNA DNA 111 127 -39 5 1771 325 265 35 42 chrX 155520616 155520758 -11129538 + GA-rich Low_complexity Low_complexity 1 141 0 5 1771 342 0 0 0 chrX 155521718 155521756 -11128540 + (TC)n Simple_repeat Simple_repeat 1 38 0 5 1771 288 0 0 0 chrX 155521756 155521787 -11128509 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1771 2511 120 90 48 chrX 155522037 155522493 -11127803 - IAPLTR2_Mm LTR ERVK 0 475 1 5 1771 836 324 7 11 chrX 155522600 155522872 -11127424 + B4A SINE B4 4 274 -18 5 1771 21 0 0 0 chrX 155522994 155523015 -11127281 + AT_rich Low_complexity Low_complexity 1 21 0 5 1771 996 274 93 45 chrX 155523075 155523472 -11126824 + MLT1D LTR MaLR 8 423 -82 5 1771 558 0 0 0 chrX 155523486 155523548 -11126748 + (TC)n Simple_repeat Simple_repeat 1 62 0 5 1771 406 313 79 0 chrX 155523548 155523661 -11126635 - B1F1 SINE Alu -28 121 1 6 1771 640 347 36 72 chrX 155523868 155524287 -11126009 - MLT1K LTR MaLR -2 593 190 6 1771 228 257 141 51 chrX 155524702 155524780 -11125516 + LTR87 LTR ERVL? 329 413 -211 6 1771 289 345 83 24 chrX 155524829 155524998 -11125298 + Tigger12 DNA MER2_type 152 330 -1629 6 1771 571 224 0 57 chrX 155525055 155525178 -11125118 + PB1D10 SINE Alu 1 116 -1 6 1771 210 208 0 0 chrX 155525179 155525227 -11125069 + GA-rich Low_complexity Low_complexity 4 51 0 6 1771 570 29 0 0 chrX 155525427 155525495 -11124801 + (TC)n Simple_repeat Simple_repeat 1 68 0 6 1771 324 0 0 0 chrX 155525497 155525533 -11124763 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1771 311 263 19 39 chrX 155525819 155525922 -11124374 - MIRb SINE MIR -112 156 56 6 1771 355 98 0 0 chrX 155526431 155526482 -11123814 + L1Md_F2 LINE L1 6520 6570 -12 6 1771 21 0 0 0 chrX 155526844 155526865 -11123431 + AT_rich Low_complexity Low_complexity 1 21 0 7 1771 4044 158 39 11 chrX 155526973 155527639 -11122657 - Lx5 LINE L1 -9 7041 6357 7 1771 1376 327 15 15 chrX 155527695 155528167 -11122129 - LTR82B Low_complexity ERVL -347 483 12 7 1771 469 279 23 0 chrX 155528287 155528416 -11121880 + L1MB3 LINE L1 5609 5740 -431 7 1771 5395 102 5 7 chrX 155528419 155529627 -11120669 - Lx LINE L1 -371 6283 5077 7 1771 1901 183 26 6 chrX 155529627 155529979 -11120317 + Lx LINE L1 6296 6654 0 7 1771 417 250 60 88 chrX 155529982 155530197 -11120099 + L1MB3 LINE L1 5731 5939 -244 7 1771 225 226 77 77 chrX 155530200 155530291 -11120005 + ORR1D1 LTR MaLR 5 95 -279 7 1771 513 260 123 0 chrX 155530714 155530860 -11119436 - MER96 DNA hAT -10 165 2 7 1771 3710 117 91 9 chrX 155530878 155531448 -11118848 + L1_Mus4 LINE L1 6019 6635 -1 7 1771 26 0 0 0 chrX 155531547 155531573 -11118723 + AT_rich Low_complexity Low_complexity 1 26 0 7 1771 777 22 0 0 chrX 155531978 155532069 -11118227 + (TC)n Simple_repeat Simple_repeat 2 92 0 7 1771 346 359 12 54 chrX 155532234 155532402 -11117894 - LTR16D LTR ERVL -212 439 279 8 1771 10353 61 8 0 chrX 155532748 155534035 -11116261 + L1_Mm LINE L1 4541 5838 -45 8 1771 384 343 96 28 chrX 155534063 155534240 -11116056 + MLT1J LTR MaLR 260 448 -64 8 1771 782 79 0 17 chrX 155534569 155534685 -11115611 + (TTTC)n Simple_repeat Simple_repeat 2 115 0 8 1771 893 274 14 44 chrX 155535395 155535689 -11114607 + Lx9 LINE L1 6996 7280 -364 8 1771 814 288 46 15 chrX 155535718 155536043 -11114253 - L1MA6 LINE L1 -269 6031 5697 8 1771 396 0 0 0 chrX 155536429 155536473 -11113823 + (TC)n Simple_repeat Simple_repeat 1 44 0 8 1771 252 0 0 0 chrX 155536473 155536500 -11113796 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 1771 641 252 34 20 chrX 155537219 155537365 -11112931 - B1F1 SINE Alu -1 148 1 8 1771 368 360 125 0 chrX 155537717 155537917 -11112379 + MIR SINE MIR 28 252 -10 8 1771 21 0 0 0 chrX 155538048 155538069 -11112227 + AT_rich Low_complexity Low_complexity 1 21 0 9 1771 609 271 11 22 chrX 155538158 155538339 -11111957 + Lx7 LINE L1 7183 7361 -335 9 1771 308 286 56 0 chrX 155538432 155538558 -11111738 + Lx7 LINE L1 7564 7696 0 9 1771 545 159 78 23 chrX 155538573 155538702 -11111594 - Lx7 LINE L1 -370 7326 7191 9 1771 237 103 0 0 chrX 155538698 155538737 -11111559 + Lx7 LINE L1 7657 7695 -1 9 1771 1645 183 77 34 chrX 155538859 155539049 -11111247 - ORR1B2 LTR MaLR 0 367 167 9 1771 507 17 0 0 chrX 155539049 155539109 -11111187 + (GA)n Simple_repeat Simple_repeat 1 60 0 9 1771 1645 183 77 34 chrX 155539109 155539269 -11111027 - ORR1B2 LTR MaLR -201 166 4 9 1771 1124 145 36 15 chrX 155539376 155539572 -11110724 + URR1B DNA MER1_type 6 205 -20 9 1771 1960 53 41 19 chrX 155539561 155539831 -11110465 + RLTR1B LTR ERV1 135 410 -102 9 1771 1204 83 6 0 chrX 155539848 155540005 -11110291 + RLTR1B LTR ERV1 355 512 0 9 1771 1499 167 183 0 chrX 155540343 155540649 -11109647 - ORR1C2 LTR MaLR 0 384 23 9 1771 396 0 0 0 chrX 155540729 155540773 -11109523 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1771 844 161 23 0 chrX 155540963 155541093 -11109203 + B1_Mus1 SINE Alu 1 133 -15 1 1771 720 0 0 0 chrX 155541095 155541175 -11109121 + (GAGAA)n Simple_repeat Simple_repeat 5 84 0 1 1771 778 187 0 22 chrX 155541339 155541476 -11108820 + B1_Mur2 SINE Alu 14 147 -2 1 1771 4198 59 39 2 chrX 155541613 155542107 -11108189 - LTRIS3 LTR ERV1 0 512 1 1 1771 1827 167 11 80 chrX 155542332 155542696 -11107600 - ORR1B1 LTR MaLR -24 370 1 1 1771 585 295 68 7 chrX 155543087 155543397 -11106899 - L1M5 LINE L1 -1717 4429 4101 1 1771 281 295 93 19 chrX 155543496 155543603 -11106693 - Lx8 LINE L1 -117 7356 7242 1 1771 1240 240 72 7 chrX 155544174 155544464 -11105832 - MTD LTR MaLR -8 411 103 1 1771 631 217 70 0 chrX 155544468 155544597 -11105699 + B1_Mur2 SINE Alu 5 142 -7 1 1771 453 66 0 0 chrX 155544599 155544660 -11105636 + (GA)n Simple_repeat Simple_repeat 1 61 0 1 1771 503 209 10 0 chrX 155544662 155544773 -11105523 - MTD LTR MaLR -308 113 3 1 1771 1385 249 21 11 chrX 155546732 155547016 -11103280 - B4 SINE B4 -4 288 2 1 1771 616 304 7 0 chrX 155547085 155547233 -11103063 + RSINE1 SINE B4 4 152 -13 1 1771 814 274 55 25 chrX 155547247 155547572 -11102724 - L1M4 LINE L1 -980 5166 4832 1 1771 1791 216 78 10 chrX 155547618 155548119 -11102177 - BLACKJACK DNA AcHobo -551 2393 1859 1 1771 588 270 36 12 chrX 155548127 155548292 -11102004 + Lx5 LINE L1 6882 7050 0 1 1771 1903 198 45 42 chrX 155548358 155548554 -11101742 + MTB_Mm LTR MaLR 5 189 -218 1 1771 1125 52 0 43 chrX 155548554 155548694 -11101602 + B1_Mus2 SINE Alu 2 135 -12 1 1771 3010 111 43 5 chrX 155548694 155549111 -11101185 + RLTR10C LTR ERVK 1 433 -3 1 1771 1903 198 45 42 chrX 155549111 155549315 -11100981 + MTB_Mm LTR MaLR 190 406 -1 1 1771 330 138 35 0 chrX 155549317 155549375 -11100921 - BLACKJACK DNA AcHobo -1140 1804 1745 1 1771 292 211 70 52 chrX 155549386 155549501 -11100795 - Lx8 LINE L1 -4 7469 7353 1 1771 1439 256 54 58 chrX 155549669 155549934 -11100362 - BLACKJACK DNA AcHobo -1271 1673 1422 1 1771 2937 41 14 17 chrX 155549934 155550281 -11100015 + ORR1A1 LTR MaLR 1 346 0 1 1771 1439 256 54 58 chrX 155550281 155550570 -11099726 - BLACKJACK DNA AcHobo -1523 1421 1121 1 1771 413 363 141 54 chrX 155550680 155550811 -11099485 + Zaphod DNA Tip100 70 194 -3837 1 1771 358 333 133 36 chrX 155550811 155551007 -11099289 + ID_B1 SINE B4 2 216 -8 1 1771 413 363 141 54 chrX 155551007 155551469 -11098827 + Zaphod DNA Tip100 195 715 -3316 1 1771 314 333 21 11 chrX 155551503 155551597 -11098699 - PB1D10 SINE Alu -21 96 2 1 1771 842 185 5 0 chrX 155551600 155551814 -11098482 + CT-rich Low_complexity Low_complexity 1 215 0 1 1771 472 301 0 68 chrX 155551819 155551951 -11098345 - ID_B1 SINE B4 0 224 102 1 1771 351 237 56 71 chrX 155551962 155552230 -11098066 + Zaphod DNA Tip100 748 1011 -3020 1 1771 8559 119 35 147 chrX 155552513 155554402 -11095894 + ORR1B1-int LTR MaLR 286 1963 0 1 1771 1331 170 44 20 chrX 155554402 155554654 -11095642 + ORR1B1 LTR MaLR 1 258 -136 1 1771 2700 173 144 20 chrX 155554654 155555238 -11095058 - RMER19B LTR ERVK 0 902 247 1 1771 704 115 79 1 chrX 155555238 155555353 -11094943 + Lx3_Mus LINE L1 6157 6270 -739 1 1771 2014 263 93 18 chrX 155556286 155556886 -11093410 - Lx9 LINE L1 -480 7164 6520 1 1771 800 211 50 40 chrX 155557120 155557337 -11092959 - Lx9 LINE L1 -1141 6503 6132 1 1771 1188 72 0 0 chrX 155557349 155557487 -11092809 + B1_Mm SINE Alu 1 138 -9 1 1771 869 222 24 19 chrX 155557690 155557897 -11092399 - Lx9 LINE L1 -17 5830 5623 1 1771 2626 84 120 0 chrX 155557908 155558275 -11092021 + IAPLTR2a LTR ERVK 1 411 0 1 1771 980 120 14 136 chrX 155558276 155558489 -11091807 + IAPEz-int LTR ERVK 9 195 -6286 1 1771 250 302 0 0 chrX 155558489 155558542 -11091754 + RLTR27 LTR ERVK 223 275 -34 1 1771 3935 61 2 18 chrX 155558542 155559045 -11091251 + IAPEz-int LTR ERVK 168 662 -5819 1 1771 1875 70 86 0 chrX 155559045 155559301 -11090995 + IAPEz-int LTR ERVK 1359 1636 -4845 1 1771 6306 34 3 19 chrX 155559300 155560056 -11090240 + IAPEz-int LTR ERVK 5736 6479 -2 1 1771 2616 87 120 0 chrX 155560058 155560425 -11089871 + IAPLTR2a LTR ERVK 1 411 0 1 1771 274 259 0 32 chrX 155560535 155560608 -11089688 - tRNA-Ala-GCY_ tRNA tRNA 0 75 5 1 1771 1402 198 86 6 chrX 155560612 155560938 -11089358 + Zaphod DNA Tip100 3675 4026 -5 1 1771 2074 329 59 38 chrX 155560942 155561874 -11088422 - BLACKJACK DNA AcHobo -1908 1036 85 1 1771 681 253 92 16 chrX 155561876 155562061 -11088235 + ID_B1 SINE B4 5 203 -21 1 1771 441 0 0 0 chrX 155562062 155562111 -11088185 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 1771 237 338 12 0 chrX 155562115 155562195 -11088101 - BLACKJACK DNA AcHobo -2859 85 5 1 1771 21 36 0 0 chrX 155562309 155562337 -11087959 + AT_rich Low_complexity Low_complexity 1 28 0 1 1771 673 170 0 258 chrX 155562338 155562536 -11087760 - B1_Mur3 SINE Alu -1 148 2 1 1771 195 261 143 14 chrX 155562887 155562957 -11087339 + L2c LINE L2 3272 3350 -37 1 1771 499 279 75 48 chrX 155563045 155563192 -11087104 - RSINE1 SINE B4 -9 156 6 1 1771 391 325 18 0 chrX 155563638 155563801 -11086495 + L1M5 LINE L1 5413 5578 -546 1 1771 323 311 29 0 chrX 155563897 155564000 -11086296 + MLT1D LTR MaLR 1 106 -399 1 1771 33 66 0 0 chrX 155564007 155564068 -11086228 + AT_rich Low_complexity Low_complexity 1 61 0 1 1771 445 195 43 65 chrX 155564279 155564360 -11085936 - RSINE1 SINE B4 -59 106 27 1 1771 2577 101 3 6 chrX 155564360 155564688 -11085608 + ORR1A2 LTR MaLR 1 327 0 1 1771 445 195 43 65 chrX 155564688 155564699 -11085597 - RSINE1 SINE B4 -139 26 16 1 1771 241 267 191 29 chrX 155565256 155565565 -11084731 - L1MEc LINE L1 -4001 2399 2041 1 1771 516 108 0 0 chrX 155565568 155565642 -11084654 + L1VL1 LINE L1 1 74 -6348 1 1771 4804 97 3 21 chrX 155565642 155566903 -11083393 + L1Md_F LINE L1 480 1717 -4166 1 1771 37013 36 0 3 chrX 155566900 155572122 -11078174 + L1Md_A LINE L1 288 5589 -297 1 1771 9364 14 1 0 chrX 155572122 155573117 -11077179 + L1Md_A LINE L1 5590 6585 0 1 1771 5387 8 0 0 chrX 155573117 155573715 -11076581 + L1Md_A LINE L1 4989 5586 -297 1 1771 9359 16 0 0 chrX 155573715 155574711 -11075585 + L1Md_A LINE L1 5587 6582 0 1 1771 5334 13 0 0 chrX 155574711 155575308 -11074988 + L1Md_T LINE L1 4990 5586 -297 1 1771 8991 32 2 0 chrX 155575308 155576302 -11073994 + L1Md_T LINE L1 5587 6582 0 1 1771 189 0 0 0 chrX 155576306 155576327 -11073969 + (TAAAA)n Simple_repeat Simple_repeat 3 23 0 1 1771 1144 141 11 0 chrX 155576390 155576575 -11073721 - RMER19B LTR ERVK -715 187 1 1 1771 1272 174 4 28 chrX 155576575 155576626 -11073670 - Lx5 LINE L1 -1164 5886 5839 1 1771 294 29 0 0 chrX 155576626 155576661 -11073635 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1771 1272 188 6 29 chrX 155576661 155576886 -11073410 - Lx5 LINE L1 -1212 5838 5644 1 1771 226 215 28 97 chrX 155576918 155576990 -11073306 + L1M5 LINE L1 5845 5911 -253 1 1771 485 353 59 25 chrX 155577015 155577370 -11072926 + Lx8 LINE L1 6969 7335 -138 1 1771 22 35 0 0 chrX 155577472 155577501 -11072795 + AT_rich Low_complexity Low_complexity 1 29 0 1 1771 345 304 29 29 chrX 155577541 155577569 -11072727 - PB1D10 SINE Alu 0 117 13 1 1771 345 273 0 0 chrX 155577569 155577646 -11072650 - ID_B1 SINE B4 -54 170 94 1 1771 319 325 132 30 chrX 155577757 155578052 -11072244 - Tigger15a DNA TcMar -292 423 99 1 1771 225 0 0 0 chrX 155578100 155578125 -11072171 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1771 459 0 0 0 chrX 155578125 155578175 -11072121 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 1771 23 0 0 0 chrX 155578410 155578433 -11071863 + AT_rich Low_complexity Low_complexity 1 23 0 1 1771 21 0 0 0 chrX 155579042 155579063 -11071233 + AT_rich Low_complexity Low_complexity 1 21 0 1 1771 254 274 81 14 chrX 155579346 155579420 -11070876 - ID4 SINE ID -3 80 2 1 1771 368 255 108 0 chrX 155579436 155579538 -11070758 - PB1D7 SINE Alu -7 113 1 1 1771 393 252 36 36 chrX 155579546 155579657 -11070639 - B1F SINE Alu -2 147 37 1 1771 459 0 0 0 chrX 155579663 155579714 -11070582 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1771 189 200 0 0 chrX 155579885 155579920 -11070376 - MIRc SINE MIR -125 143 109 1 1771 694 262 20 0 chrX 155580422 155580571 -11069725 - RSINE1 SINE B4 -10 155 4 1 1771 403 229 17 0 chrX 155580588 155580706 -11069590 + (TA)n Simple_repeat Simple_repeat 2 121 0 1 1771 763 300 155 8 chrX 155580708 155580960 -11069336 + B4A SINE B4 2 290 -2 1 1771 342 387 60 0 chrX 155581361 155581560 -11068736 + LTR16A LTR ERVL 65 275 -176 1 221 1021 246 88 26 chrX 155582304 155582609 -11067687 + Lx8 LINE L1 7148 7471 -2 1 1772 871 298 107 37 chrX 155583029 155583510 -11066786 + LTR50 LTR ERVL 2 611 -184 1 1772 280 299 13 0 chrX 155583510 155583587 -11066709 - ID4 SINE ID -2 81 4 1 1772 554 274 22 44 chrX 155583587 155583615 -11066681 + LTR50 LTR ERVL 612 638 -157 1 1772 809 265 26 5 chrX 155583589 155583779 -11066517 - B3 SINE B2 -21 195 2 1 1772 604 229 0 18 chrX 155583792 155583903 -11066393 - PB1D10 SINE Alu -8 109 1 1 1772 408 196 10 52 chrX 155583966 155584063 -11066233 + B3 SINE B2 114 206 -10 1 1772 658 280 151 17 chrX 155584066 155584411 -11065885 + L1ME4a LINE L1 4364 4754 -1392 1 1772 2005 103 109 64 chrX 155584411 155584723 -11065573 - ORR1A3 LTR MaLR 0 326 1 1 1772 2416 174 15 0 chrX 155584728 155585135 -11065161 + MTC LTR MaLR 1 413 -8 1 1772 454 205 0 0 chrX 155585262 155585345 -11064951 - PB1D10 SINE Alu -11 106 24 1 1772 731 263 0 13 chrX 155585552 155585706 -11064590 + RSINE1 SINE B4 3 154 -11 1 1772 28 29 0 0 chrX 155585706 155585741 -11064555 + AT_rich Low_complexity Low_complexity 1 35 0 1 1772 272 340 36 63 chrX 155585747 155585956 -11064340 - L2a LINE L2 -304 3122 2922 1 1772 310 352 74 68 chrX 155586207 155586365 -11063931 - L1M5 LINE L1 -1127 5019 4856 1 1772 588 29 0 0 chrX 155586365 155586435 -11063861 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1772 180 0 0 0 chrX 155586435 155586454 -11063842 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 1772 310 352 74 68 chrX 155586454 155586782 -11063514 - L1M5 LINE L1 -1291 4855 4530 1 1772 3189 53 8 0 chrX 155586995 155587369 -11062927 + L1Md_F2 LINE L1 6194 6570 -12 1 1772 333 358 35 22 chrX 155587707 155587933 -11062363 + L1ME4a LINE L1 5681 5909 -215 1 1772 3135 24 0 0 chrX 155587936 155588273 -11062023 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1772 26003 27 40 9 chrX 155588273 155591336 -11058960 + IAPEz-int LTR ERVK 8 3165 -3316 1 1772 10208 17 3 0 chrX 155591325 155592458 -11057838 + IAPEz-int LTR ERVK 5345 6481 0 1 1772 3135 24 0 0 chrX 155592458 155592795 -11057501 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1772 21 0 0 0 chrX 155592986 155593007 -11057289 + AT_rich Low_complexity Low_complexity 1 21 0 1 1772 548 282 88 6 chrX 155594263 155594445 -11055851 + L1MB3 LINE L1 5950 6146 -37 1 1772 198 0 0 0 chrX 155595938 155595960 -11054336 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 1772 187 275 0 0 chrX 155596072 155596112 -11054184 - MER5A DNA MER1_type -36 153 114 1 1772 924 203 63 44 chrX 155596348 155596554 -11053742 - B3 SINE B2 -5 211 2 1 1772 238 337 96 0 chrX 155596986 155597069 -11053227 + MLT2B1 LTR ERVL 382 472 -95 1 1772 892 219 99 145 chrX 155597128 155597231 -11053065 + B4A SINE B4 5 96 -196 1 1772 315 0 0 0 chrX 155597231 155597266 -11053030 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1772 892 219 99 145 chrX 155597266 155597445 -11052851 + B4A SINE B4 97 274 -18 1 1772 243 0 0 0 chrX 155597458 155597485 -11052811 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1772 444 19 0 0 chrX 155597485 155597537 -11052759 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 1772 370 294 62 77 chrX 155597584 155597808 -11052488 + MLT2B1 LTR ERVL 347 562 -5 2 1772 372 297 101 24 chrX 155597911 155598080 -11052216 - MER5A DNA MER1_type -7 182 1 1 1772 281 231 19 0 chrX 155598337 155598389 -11051907 + ID4 SINE ID 8 60 -23 2 1772 2572 80 3 58 chrX 155598460 155598806 -11051490 - ORR1A2 LTR MaLR 0 327 1 2 1772 8605 137 25 74 chrX 155598806 155600488 -11049808 - ORR1A2-int LTR MaLR 0 1792 193 2 1772 450 256 155 35 chrX 155600751 155600925 -11049371 - MER3 DNA MER1_type -9 200 6 2 1772 939 259 18 18 chrX 155601002 155601222 -11049074 + ID_B1 SINE B4 1 220 -4 2 1772 284 366 0 12 chrX 155601209 155601292 -11049004 + Charlie1 DNA MER1_type 7 88 -2693 2 1772 492 276 0 19 chrX 155601790 155601906 -11048390 - PB1 SINE Alu -11 116 2 2 1772 5363 32 5 3 chrX 155602112 155602713 -11047583 - L1Md_F2 LINE L1 -1 6581 5980 2 1772 1738 20 5 0 chrX 155602724 155602927 -11047369 - L1_Mm LINE L1 -419 5464 5261 2 1772 199 217 129 14 chrX 155602927 155602997 -11047299 - MIR SINE MIR -98 164 87 2 1772 369 0 0 0 chrX 155603229 155603270 -11047026 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1772 405 0 0 0 chrX 155603270 155603314 -11046982 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1772 218 234 277 45 chrX 155603335 155603447 -11046849 + MIRb SINE MIR 126 263 -5 2 1772 243 0 0 0 chrX 155603466 155603493 -11046803 + (TC)n Simple_repeat Simple_repeat 2 28 0 2 1772 256 351 33 151 chrX 155603624 155603786 -11046510 + ORR1E LTR MaLR 97 241 -118 2 1772 717 226 40 70 chrX 155603786 155603986 -11046310 + B3A SINE B2 5 198 0 2 1772 256 351 33 151 chrX 155603986 155604068 -11046228 + ORR1E LTR MaLR 242 312 -47 2 1772 249 375 0 89 chrX 155604097 155604220 -11046076 - MLT1K LTR MaLR -184 411 300 2 1772 256 150 267 0 chrX 155604267 155604327 -11045969 - LTR40b LTR ERVL -58 404 329 2 1772 1535 143 9 0 chrX 155604357 155604581 -11045715 - URR1A DNA MER1_type 0 226 1 2 1772 234 260 108 20 chrX 155604833 155604935 -11045361 + MER103 DNA DNA 4 114 -52 2 1772 342 0 0 0 chrX 155605469 155605507 -11044789 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1772 1797 72 5 0 chrX 155605551 155605774 -11044522 + L1Md_F2 LINE L1 6348 6571 -11 2 1772 216 135 0 0 chrX 155605816 155605853 -11044443 + (A)n Simple_repeat Simple_repeat 1 37 0 2 1772 235 114 43 64 chrX 155605859 155605906 -11044390 - L3 LINE CR1 -5 4484 4439 2 1772 344 282 100 56 chrX 155607157 155607337 -11042959 + MLT1N2 LTR MaLR 17 204 -358 2 1772 292 309 62 26 chrX 155607471 155607584 -11042712 + MLT1N2 LTR MaLR 374 490 -72 2 1772 817 238 119 0 chrX 155607603 155607788 -11042508 - B3 SINE B2 -9 207 1 2 1772 252 159 95 68 chrX 155608053 155608127 -11042169 - MLT1A0 LTR MaLR -332 76 1 2 1772 527 269 119 99 chrX 155608182 155608434 -11041862 + MLT1A1 LTR MaLR 150 406 -2 2 1772 1108 260 16 81 chrX 155610094 155610404 -11039892 + B4A SINE B4 3 292 0 2 1772 225 0 0 0 chrX 155610527 155610552 -11039744 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 1772 960 160 6 0 chrX 155610915 155611071 -11039225 - Lx LINE L1 -230 6820 6664 2 1772 5530 131 6 66 chrX 155611071 155612074 -11038222 + L1_Mur2 LINE L1 4051 4993 -884 2 1772 366 23 0 0 chrX 155612617 155612660 -11037636 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 2 1772 230 0 0 32 chrX 155612717 155612748 -11037548 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 2 1772 6494 131 13 5 chrX 155612748 155613924 -11036372 - Lx LINE L1 -12 6642 5460 2 1772 3617 32 18 2 chrX 155613924 155614367 -11035929 - L1Md_F2 LINE L1 0 6582 6133 2 1772 4976 124 14 11 chrX 155614367 155614783 -11035513 - Lx LINE L1 -424 5459 5042 2 1772 282 149 0 0 chrX 155614789 155614836 -11035460 + ORR1B2 LTR MaLR 321 367 0 2 1772 31 0 0 0 chrX 155616428 155616459 -11033837 + AT_rich Low_complexity Low_complexity 1 31 0 2 1772 414 265 0 0 chrX 155616538 155616621 -11033675 + ID4 SINE ID 1 83 0 2 1772 661 234 32 7 chrX 155617458 155617613 -11032683 + MER5A1 DNA MER1_type 8 166 0 2 1772 334 269 29 45 chrX 155617619 155617740 -11032556 + B4 SINE B4 2 122 -170 2 1772 195 186 0 0 chrX 155617740 155617783 -11032513 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1772 22744 109 52 16 chrX 155617977 155619411 -11030885 - L1_Mus4 LINE L1 -3 6633 5135 2 1772 1138 71 0 0 chrX 155619411 155619552 -11030744 - B1_Mus2 SINE Alu -5 142 2 2 1772 22744 152 21 20 chrX 155619552 155624340 -11025956 - L1_Mus4 LINE L1 -749 5134 356 2 1772 304 328 115 44 chrX 155624648 155624800 -11025496 + MIR SINE MIR 33 204 -64 2 1772 390 21 0 0 chrX 155624800 155624847 -11025449 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1772 4521 138 43 13 chrX 155624847 155625560 -11024736 + RMER19A LTR ERVK 3 737 0 2 1772 304 328 108 48 chrX 155625560 155625613 -11024683 + MIR SINE MIR 190 243 -19 2 1772 186 189 0 0 chrX 155625634 155625671 -11024625 + (CAT)n Simple_repeat Simple_repeat 3 39 0 2 1772 184 306 171 0 chrX 155625671 155625782 -11024514 - L3 LINE CR1 -974 3515 3386 2 1772 957 258 5 0 chrX 155626532 155626718 -11023578 + B4A SINE B4 106 292 0 2 1772 198 150 0 0 chrX 155626767 155626807 -11023489 + (GA)n Simple_repeat Simple_repeat 1 40 0 2 1772 1201 257 71 32 chrX 155627057 155627349 -11022947 + L1MB7 LINE L1 5426 5731 -453 2 1772 320 203 108 0 chrX 155627349 155627423 -11022873 + ID4 SINE ID 2 83 0 2 1772 1201 257 71 32 chrX 155627423 155627565 -11022731 + L1MB7 LINE L1 5732 5877 -307 2 1772 1265 251 119 3 chrX 155627591 155627951 -11022345 - MTD LTR MaLR 0 419 18 2 1772 459 207 56 62 chrX 155628049 155628166 -11022130 - PB1D10 SINE Alu -1 116 2 2 1772 318 311 33 8 chrX 155628233 155628353 -11021943 + L1MB7 LINE L1 6050 6172 -6 2 1772 395 316 79 0 chrX 155628838 155628990 -11021306 - MER5A1 DNA MER1_type 0 166 3 2 1772 3486 276 85 42 chrX 155629019 155629382 -11020914 - Charlie1a DNA MER1_type -21 1434 1039 2 1772 350 288 234 39 chrX 155629382 155629613 -11020683 + B4A SINE B4 1 276 -16 2 1772 3486 276 85 42 chrX 155629613 155629626 -11020670 - Charlie1a DNA MER1_type -417 1038 1035 2 1772 228 35 0 0 chrX 155629626 155629655 -11020641 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1772 3486 276 85 42 chrX 155629655 155630637 -11019659 - Charlie1a DNA MER1_type -421 1034 16 2 1772 278 269 136 18 chrX 155631323 155631433 -11018863 - L2a LINE L2 -5 3421 3299 2 1772 603 276 61 57 chrX 155631691 155631971 -11018325 + B4A SINE B4 2 282 -10 2 1772 447 224 206 98 chrX 155632008 155632295 -11018001 - Lx9 LINE L1 -1166 6478 6161 2 1772 576 214 58 47 chrX 155632325 155632516 -11017780 - Lx9 LINE L1 -1622 6022 5830 2 1772 2146 185 49 5 chrX 155632515 155632961 -11017335 + Lx9 LINE L1 6493 6958 -686 2 1772 417 304 108 34 chrX 155633488 155633692 -11016604 - LTR16C LTR ERVL -10 479 261 2 1772 252 0 0 0 chrX 155633751 155633779 -11016517 + (GA)n Simple_repeat Simple_repeat 1 28 0 2 1772 180 200 14 155 chrX 155634159 155634230 -11016066 + L3 LINE CR1 3386 3446 -1043 2 1772 1091 284 38 12 chrX 155634845 155635320 -11014976 + L1MC3 LINE L1 7293 7713 -72 2 1772 210 292 22 33 chrX 155635341 155635433 -11014863 + GA-rich Low_complexity Low_complexity 1 91 0 2 1772 476 288 24 59 chrX 155635522 155635692 -11014604 - RSINE1 SINE B4 0 165 2 2 1772 279 343 71 51 chrX 155637536 155637805 -11012491 + L2b LINE L2 3085 3349 -38 2 1772 408 297 114 41 chrX 155638474 155638790 -11011506 + L1MC4 LINE L1 7560 7898 -144 2 1772 201 196 0 0 chrX 155638814 155638860 -11011436 + (TGGA)n Simple_repeat Simple_repeat 4 49 0 2 1772 301 179 244 49 chrX 155638949 155639031 -11011265 - B1F SINE Alu -7 142 45 2 1772 265 203 203 0 chrX 155639031 155639095 -11011201 - B1F SINE Alu -46 103 27 2 1772 192 40 0 0 chrX 155639907 155639932 -11010364 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 2 1772 440 200 0 36 chrX 155639942 155640025 -11010271 - RSINE1 SINE B4 -83 82 3 2 1772 1196 266 16 50 chrX 155640096 155640417 -11009879 + MTE2b LTR MaLR 70 379 0 2 1772 300 369 9 28 chrX 155640437 155640543 -11009753 - LTR16E1 LTR ERVL -225 313 210 2 1772 863 304 41 26 chrX 155641629 155641899 -11008397 + B4A SINE B4 8 281 -11 2 1772 261 0 0 0 chrX 155641917 155641946 -11008350 + (TAGA)n Simple_repeat Simple_repeat 2 30 0 2 1772 369 0 0 0 chrX 155642080 155642121 -11008175 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1772 390 42 0 0 chrX 155642291 155642339 -11007957 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1772 183 100 0 0 chrX 155642340 155642370 -11007926 + (GA)n Simple_repeat Simple_repeat 1 30 0 2 1772 24 0 0 0 chrX 155642842 155642866 -11007430 + AT_rich Low_complexity Low_complexity 1 24 0 2 1772 3703 200 50 74 chrX 155642886 155643937 -11006359 - Lx2B LINE L1 -2 7056 5963 2 1772 763 123 20 33 chrX 155643937 155643955 -11006341 + Lx3C LINE L1 5692 5709 -1267 2 1772 958 96 0 17 chrX 155643955 155644136 -11006160 + (CAGAGA)n Simple_repeat Simple_repeat 1 178 0 2 1772 763 123 20 33 chrX 155644136 155644268 -11006028 + Lx3C LINE L1 5710 5840 -1136 2 1772 203 133 0 22 chrX 155644442 155644488 -11005808 + (TTG)n Simple_repeat Simple_repeat 1 45 0 2 1772 664 241 0 14 chrX 155644488 155644635 -11005661 - B1_Mur2 SINE Alu -2 147 3 2 1772 204 40 0 0 chrX 155644676 155644701 -11005595 + (TTA)n Simple_repeat Simple_repeat 1 25 0 2 1772 362 263 84 0 chrX 155644701 155644796 -11005500 - ID_B1 SINE B4 -12 212 110 2 1772 395 324 9 0 chrX 155644844 155644952 -11005344 - ID_B1 SINE B4 -113 111 3 2 1772 1021 290 97 30 chrX 155645001 155645560 -11004736 - L1ME3 LINE L1 -38 6124 5529 2 1772 3795 29 4 2 chrX 155645706 155646157 -11004139 - L1Md_F3 LINE L1 0 6584 6133 2 1772 1141 49 0 7 chrX 155646419 155646564 -11003732 + B1_Mus2 SINE Alu 2 145 -2 2 1772 207 161 0 0 chrX 155646567 155646598 -11003698 + polypurine Low_complexity Low_complexity 4 34 0 2 1772 454 358 9 77 chrX 155646601 155646834 -11003462 - LTR16C LTR ERVL -92 397 181 2 1772 755 274 6 6 chrX 155646910 155647079 -11003217 - ID_B1 SINE B4 -42 182 14 2 1772 485 322 93 67 chrX 155647139 155647549 -11002747 - MLT1H LTR MaLR -22 527 47 2 1772 191 36 0 35 chrX 155647874 155647903 -11002393 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 2 1772 468 35 0 0 chrX 155649799 155649857 -11000439 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1772 432 302 85 8 chrX 155649868 155649998 -11000298 - RSINE1 SINE B4 -25 140 1 3 1772 21 57 0 0 chrX 155650455 155650490 -10999806 + AT_rich Low_complexity Low_complexity 1 35 0 3 1772 982 296 62 81 chrX 155650519 155650687 -10999609 + L1ME2 LINE L1 5516 5700 -464 3 1772 255 250 0 42 chrX 155650687 155650758 -10999538 + ID2 SINE ID 2 69 -14 3 1772 982 296 62 81 chrX 155650758 155651204 -10999092 + L1ME2 LINE L1 5701 6118 -46 3 1772 23 0 0 0 chrX 155651227 155651250 -10999046 + AT_rich Low_complexity Low_complexity 1 23 0 3 1772 814 209 7 0 chrX 155651252 155651400 -10998896 - B1_Mur1 SINE Alu 0 149 1 3 1772 334 387 28 24 chrX 155651606 155651855 -10998441 + MIRb SINE MIR 4 253 -15 3 1772 525 377 98 23 chrX 155652115 155652422 -10997874 + MER115 DNA Tip100 207 536 -157 3 1772 249 320 13 26 chrX 155652465 155652542 -10997754 + MER115 DNA Tip100 614 689 -4 3 1772 275 306 0 12 chrX 155652632 155652718 -10997578 + L2a LINE L2 3338 3422 -4 3 1772 545 260 196 0 chrX 155652815 155652988 -10997308 + ID_B1 SINE B4 1 207 -17 3 1772 536 281 23 0 chrX 155653642 155653770 -10996526 + RSINE1 SINE B4 3 133 -32 3 1772 333 0 0 0 chrX 155653771 155653808 -10996488 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1772 776 221 46 8 chrX 155653993 155654230 -10996066 + L1MA8 LINE L1 6024 6269 -22 3 1772 699 253 81 38 chrX 155654237 155654422 -10995874 - B3A SINE B2 -5 193 1 3 1772 557 267 46 35 chrX 155654478 155654738 -10995558 + L1MA6 LINE L1 6038 6300 0 3 1772 393 221 0 0 chrX 155656465 155656569 -10993727 + (CA)n Simple_repeat Simple_repeat 2 105 0 3 1772 519 56 0 0 chrX 155656858 155656929 -10993367 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 3 1772 1218 42 0 0 chrX 155656935 155657077 -10993219 - B1_Mm SINE Alu -5 142 1 3 1772 383 0 21 0 chrX 155657439 155657486 -10992810 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1772 533 272 9 0 chrX 155657547 155657661 -10992635 - PB1D10 SINE Alu -1 116 2 3 1772 211 281 197 8 chrX 155657788 155657910 -10992386 - MIR3 SINE MIR -28 180 36 3 1772 1010 381 39 29 chrX 155658330 155658822 -10991474 + LTR33 LTR ERVL 19 515 0 3 1772 25 0 0 0 chrX 155658850 155658875 -10991421 + AT_rich Low_complexity Low_complexity 1 25 0 3 1772 332 279 81 52 chrX 155659495 155659669 -10990627 - L1MC4a LINE L1 -1963 5919 5741 3 1772 234 62 0 0 chrX 155659701 155659733 -10990563 + (TC)n Simple_repeat Simple_repeat 2 33 0 3 1772 474 269 45 29 chrX 155659767 155660013 -10990283 - L1MC4a LINE L1 -488 5636 5388 3 1772 2873 288 46 31 chrX 155660530 155661561 -10988735 - Lx8 LINE L1 -244 7229 6184 3 1772 234 303 11 22 chrX 155661758 155661849 -10988447 - Lx9 LINE L1 -1675 5969 5880 3 1772 461 260 167 24 chrX 155661929 155662217 -10988079 - L1MA4 LINE L1 -272 6028 5700 3 1772 27 0 0 0 chrX 155662217 155662244 -10988052 + AT_rich Low_complexity Low_complexity 1 27 0 3 1772 32 0 0 0 chrX 155662263 155662295 -10988001 + AT_rich Low_complexity Low_complexity 1 32 0 3 1772 32 0 0 0 chrX 155662314 155662346 -10987950 + AT_rich Low_complexity Low_complexity 1 32 0 3 1772 26 0 0 0 chrX 155662365 155662391 -10987905 + AT_rich Low_complexity Low_complexity 1 26 0 3 1772 969 261 74 29 chrX 155662391 155662931 -10987365 - L1MA4 LINE L1 -571 5729 5153 3 1772 180 0 0 0 chrX 155663067 155663087 -10987209 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 1772 1138 51 0 0 chrX 155663087 155663224 -10987072 - B1_Mm SINE Alu -10 137 1 3 1772 484 226 75 0 chrX 155663329 155663435 -10986861 + PB1D10 SINE Alu 3 116 -1 3 1772 183 80 0 0 chrX 155663487 155663512 -10986784 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 3 1772 1263 62 0 6 chrX 155663512 155663675 -10986621 - B2_Mm2 SINE B2 -32 163 2 3 1772 631 309 62 18 chrX 155664196 155664420 -10985876 + MLT1F LTR MaLR 312 545 -3 3 1772 198 227 40 120 chrX 155664816 155664916 -10985380 + L3 LINE CR1 2114 2205 -2284 3 1772 334 221 59 0 chrX 155665182 155665250 -10985046 - ID4_ SINE ID 0 83 12 3 1772 454 250 0 36 chrX 155665488 155665600 -10984696 + PB1 SINE Alu 18 125 -2 3 1772 254 312 93 46 chrX 155665711 155665862 -10984434 + LTR48B LTR ERV1 1 158 -486 3 1772 433 261 92 42 chrX 155665954 155666074 -10984222 + B1F SINE Alu 24 149 0 3 1772 308 43 22 0 chrX 155666117 155666163 -10984133 + (TTA)n Simple_repeat Simple_repeat 3 49 0 3 1772 900 219 104 0 chrX 155666240 155666441 -10983855 - URR1A DNA MER1_type -4 222 1 3 1772 239 331 80 58 chrX 155666525 155666663 -10983633 - MLT1K LTR MaLR -246 349 209 3 1772 523 294 0 0 chrX 155666966 155667075 -10983221 - PB1D10 SINE Alu -8 109 1 3 1772 1694 94 50 64 chrX 155667307 155667390 -10982906 - MTC LTR MaLR -142 279 211 3 1772 1110 88 139 6 chrX 155667390 155667562 -10982734 - B2_Mm2 SINE B2 0 195 1 3 1772 1694 94 50 64 chrX 155667562 155667761 -10982535 - MTC LTR MaLR -211 210 1 3 1772 1161 49 14 0 chrX 155668857 155668999 -10981297 + B1_Mus1 SINE Alu 1 144 -4 3 1772 402 21 0 0 chrX 155669000 155669047 -10981249 + (TAA)n Simple_repeat Simple_repeat 2 48 0 3 1772 283 229 0 0 chrX 155669092 155669140 -10981156 + PB1D10 SINE Alu 62 109 -8 3 1772 303 21 0 0 chrX 155669479 155669527 -10980769 + L1Md_A LINE L1 6535 6582 0 3 1772 242 226 29 11 chrX 155669689 155669864 -10980432 + (TA)n Simple_repeat Simple_repeat 2 179 0 3 1772 358 343 98 52 chrX 155670010 155670360 -10979936 - MLT1J LTR MaLR -2 510 73 3 1772 628 241 9 0 chrX 155670402 155670518 -10979778 + RSINE1 SINE B4 2 118 -47 3 1772 216 0 0 0 chrX 155670540 155670564 -10979732 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 1772 412 261 44 26 chrX 155670629 155670743 -10979553 + PB1D10 SINE Alu 2 117 0 3 1772 499 292 6 58 chrX 155671061 155671217 -10979079 + RSINE1 SINE B4 4 151 -14 3 1772 216 111 0 0 chrX 155671217 155671253 -10979043 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1772 492 62 0 0 chrX 155671470 155671534 -10978762 + (GGGA)n Simple_repeat Simple_repeat 4 67 0 3 1772 24 0 0 0 chrX 155672493 155672517 -10977779 + AT_rich Low_complexity Low_complexity 1 24 0 3 1772 7751 80 11 22 chrX 155673142 155675078 -10975218 + L1_Mus2 LINE L1 4648 6566 0 3 1772 232 242 15 15 chrX 155675282 155675349 -10974947 + RLTR46 LTR ERVK 242 308 -12 3 1772 499 267 128 18 chrX 155675326 155675490 -10974806 + ORR1D2 LTR MaLR 93 274 -96 3 1772 864 260 91 68 chrX 155675515 155675878 -10974418 - L1M2 LINE L1 -746 5566 5128 3 1772 2559 49 6 3 chrX 155675878 155676203 -10974093 - L1Md_F2 LINE L1 -2 6580 6255 3 1772 864 262 72 55 chrX 155676203 155676514 -10973782 - L1M2 LINE L1 -940 5203 4877 3 1772 412 264 107 15 chrX 155676514 155676645 -10973651 - RMER15 LTR ERVL 0 575 433 3 1772 6149 52 0 10 chrX 155676650 155677427 -10972869 + L1Md_F2 LINE L1 5811 6579 -3 3 1772 3664 308 47 20 chrX 155677471 155677852 -10972444 + Lx8 LINE L1 5854 6257 -1216 3 1772 342 0 0 0 chrX 155677852 155677890 -10972406 + (GAA)n Simple_repeat Simple_repeat 2 39 0 3 1772 3664 308 47 20 chrX 155677890 155678737 -10971559 + Lx8 LINE L1 6258 7111 -362 3 1772 1228 57 74 6 chrX 155678737 155678913 -10971383 + B2_Mm2 SINE B2 2 189 -6 3 1772 3664 308 47 20 chrX 155678913 155679260 -10971036 + Lx8 LINE L1 7112 7473 0 3 1772 412 301 172 8 chrX 155679263 155679397 -10970899 - RMER15 LTR ERVL -144 431 276 3 1772 712 279 74 3 chrX 155679576 155679860 -10970436 - L1M2 LINE L1 -1276 4867 4564 3 1772 181 211 26 0 chrX 155679889 155679927 -10970369 - L2 LINE L2 -1102 2317 2279 3 1772 705 212 45 0 chrX 155680254 155680386 -10969910 + B1_Mus2 SINE Alu 10 147 0 3 1772 221 133 44 0 chrX 155680386 155680431 -10969865 + (CAT)n Simple_repeat Simple_repeat 3 49 0 3 1772 336 297 80 42 chrX 155680622 155680959 -10969337 + L1MEb LINE L1 336 685 -5385 3 1772 1118 256 114 13 chrX 155681455 155681771 -10968525 + MTE2b LTR MaLR 3 350 -29 3 1772 305 259 173 0 chrX 155681828 155681909 -10968387 + PB1D9 SINE Alu 16 110 -10 3 1772 302 0 26 0 chrX 155681909 155681947 -10968349 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1772 678 69 0 0 chrX 155681947 155682047 -10968249 + (GA)n Simple_repeat Simple_repeat 2 102 0 3 1772 627 375 99 40 chrX 155682047 155682452 -10967844 - MLT1H LTR MaLR -60 489 61 3 1772 2644 164 109 36 chrX 155682467 155682942 -10967354 - RMER15 LTR ERVL -5 570 56 3 1772 2897 69 0 23 chrX 155682942 155683341 -10966955 + L1Md_F2 LINE L1 6193 6582 0 3 1772 2644 164 109 36 chrX 155683341 155683396 -10966900 - RMER15 LTR ERVL -520 55 1 3 1772 304 230 58 0 chrX 155683453 155683540 -10966756 + L1MB2 LINE L1 5680 5771 -400 3 1772 329 212 73 24 chrX 155683572 155683654 -10966642 + Lx8 LINE L1 6886 6971 -502 3 1772 946 232 71 39 chrX 155683646 155683929 -10966367 + Lx8 LINE L1 7177 7468 -5 3 1772 530 311 126 11 chrX 155683984 155684166 -10966130 - MER21B LTR ERV1 -485 378 176 3 1772 306 0 0 0 chrX 155684255 155684289 -10966007 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 1772 270 0 0 0 chrX 155684289 155684318 -10965978 + (GA)n Simple_repeat Simple_repeat 1 30 0 3 1772 1359 182 33 79 chrX 155684325 155684719 -10965577 + L1MB2 LINE L1 5787 6162 -9 3 1772 32 36 0 18 chrX 155684719 155684731 -10965565 + AT_rich Low_complexity Low_complexity 1 12 0 3 1772 1233 35 0 0 chrX 155684731 155684874 -10965422 + B1_Mm SINE Alu 2 144 -3 3 1772 32 36 0 18 chrX 155684874 155684918 -10965378 + AT_rich Low_complexity Low_complexity 1 44 0 3 1772 987 299 92 14 chrX 155685477 155685846 -10964450 - MLT1C LTR MaLR -67 400 3 3 1772 195 188 0 0 chrX 155686651 155686699 -10963597 + T-rich Low_complexity Low_complexity 1 48 0 3 1772 271 341 73 36 chrX 155687563 155687700 -10962596 - MIRb SINE MIR -6 262 121 3 1772 363 265 168 41 chrX 155687861 155688105 -10962191 + B4 SINE B4 2 276 -16 3 1772 23 0 0 29 chrX 155688134 155688148 -10962148 + AT_rich Low_complexity Low_complexity 1 14 0 3 1772 1204 81 57 6 chrX 155688148 155688323 -10961973 - B2_Mm2 SINE B2 -11 184 1 3 1772 23 0 0 29 chrX 155688323 155688342 -10961954 + AT_rich Low_complexity Low_complexity 1 19 0 3 1772 229 314 0 0 chrX 155688512 155688563 -10961733 - B1F2 SINE Alu -97 52 2 3 1772 180 0 0 0 chrX 155689091 155689111 -10961185 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 1772 405 0 0 0 chrX 155689125 155689170 -10961126 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 1772 322 267 33 49 chrX 155689516 155689638 -10960658 + PB1D7 SINE Alu 1 120 0 4 1772 332 209 75 9 chrX 155689638 155689744 -10960552 - MER33 DNA MER1_type -88 236 124 4 1772 462 143 0 0 chrX 155689786 155689863 -10960433 + (TCC)n Simple_repeat Simple_repeat 2 78 0 4 1772 823 179 14 7 chrX 155689863 155690009 -10960287 - B1_Mur4 SINE Alu -1 149 3 4 1772 188 34 0 33 chrX 155690201 155690231 -10960065 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1772 687 80 125 0 chrX 155690235 155690347 -10959949 - B1_Mus2 SINE Alu 0 147 22 4 1772 387 0 0 0 chrX 155690916 155690959 -10959337 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 1772 240 363 9 26 chrX 155691083 155691199 -10959097 + PB1D10 SINE Alu 2 115 -2 4 1772 25 31 0 0 chrX 155691381 155691413 -10958883 + AT_rich Low_complexity Low_complexity 1 32 0 4 1772 466 234 76 82 chrX 155691419 155691577 -10958719 - RSINE1 SINE B4 -6 159 3 4 1772 261 0 43 43 chrX 155691711 155691757 -10958539 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 4 1772 621 0 0 0 chrX 155692350 155692419 -10957877 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 1772 521 76 0 12 chrX 155693468 155693548 -10956748 + (GGA)n Simple_repeat Simple_repeat 2 80 0 4 1772 685 167 0 6 chrX 155695887 155696011 -10954285 - B1_Mur1 SINE Alu -1 119 1 4 1772 485 232 118 32 chrX 155696232 155696419 -10953877 - MIRb SINE MIR -13 255 53 4 1772 266 297 0 13 chrX 155696576 155696651 -10953645 + (TATG)n Simple_repeat Simple_repeat 2 75 0 4 1772 299 286 119 37 chrX 155697096 155697205 -10953091 + L2b LINE L2 3254 3371 -4 4 1772 333 0 0 0 chrX 155698955 155698992 -10951304 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1772 309 284 52 10 chrX 155699703 155699799 -10950497 + Kanga1a DNA Tc2 655 754 0 4 1772 241 170 43 0 chrX 155700270 155700317 -10949979 + B1_Mur2 SINE Alu 100 148 -1 4 1772 553 259 29 7 chrX 155700577 155700717 -10949579 + RSINE1 SINE B4 4 146 -19 4 1772 29 70 0 0 chrX 155700766 155700823 -10949473 + AT_rich Low_complexity Low_complexity 1 57 0 4 1772 609 221 57 0 chrX 155700936 155701076 -10949220 - B1F1 SINE Alu 0 149 2 4 1772 317 280 176 8 chrX 155702227 155702251 -10948045 + B1F SINE Alu 1 139 -10 4 1772 434 255 0 11 chrX 155702251 155702346 -10947950 + ID_B1 SINE B4 121 214 -10 4 1772 441 332 61 60 chrX 155702371 155702659 -10947637 + B4 SINE B4 27 281 -11 4 1772 658 283 36 20 chrX 155702710 155702905 -10947391 + B3A SINE B2 1 198 0 4 1772 234 254 95 0 chrX 155703008 155703071 -10947225 - ID4 SINE ID -13 70 2 4 1772 769 154 29 0 chrX 155703686 155703822 -10946474 + B1_Mur3 SINE Alu 1 140 -9 4 1772 233 300 90 25 chrX 155704195 155704343 -10945953 - MIRb SINE MIR -95 167 19 4 1772 462 228 11 0 chrX 155705022 155705114 -10945182 - MTD LTR MaLR -326 93 1 4 1772 1607 248 104 29 chrX 155705115 155705808 -10944488 - L1MB7 LINE L1 -70 6114 5370 4 1772 264 258 150 35 chrX 155706737 155706910 -10943386 + L1MDa LINE L1 16 208 -6425 4 1772 289 208 171 85 chrX 155707751 155707904 -10942392 + L1MDa LINE L1 1278 1440 -5193 4 1772 635 225 0 0 chrX 155707904 155708024 -10942272 + PB1D7 SINE Alu 1 120 0 4 1772 289 208 171 85 chrX 155708024 155708128 -10942168 + L1MDa LINE L1 1441 1557 -5076 4 1772 292 270 142 8 chrX 155708275 155708402 -10941894 + L1MB2 LINE L1 6000 6143 -28 4 1772 677 258 98 16 chrX 155708438 155708753 -10941543 + L1MDa LINE L1 1740 2080 -4553 4 1772 572 297 146 23 chrX 155708738 155709300 -10940996 + L1MDa LINE L1 3952 4582 -1955 4 1772 245 318 143 39 chrX 155709379 155709533 -10940763 + B4 SINE B4 103 272 -20 4 1772 269 311 67 0 chrX 155709617 155709752 -10940544 + L1M4 LINE L1 4185 4328 -1818 4 1772 346 264 86 61 chrX 155709855 155710015 -10940281 + L1MDa LINE L1 4885 5046 -1491 4 1772 430 146 258 0 chrX 155710015 155710104 -10940192 + PB1D9 SINE Alu 3 114 -6 4 1772 346 264 86 61 chrX 155710104 155710270 -10940026 + L1MDa LINE L1 5047 5219 -1318 4 1772 1405 74 16 5 chrX 155712075 155712266 -10938030 + B2_Mm2 SINE B2 1 193 -2 4 1772 1115 29 0 48 chrX 155712282 155712429 -10937867 + B1_Mus1 SINE Alu 2 141 -7 4 1772 246 62 0 0 chrX 155712431 155712463 -10937833 + (A)n Simple_repeat Simple_repeat 1 32 0 4 1772 379 325 8 54 chrX 155712866 155712996 -10937300 + RSINE1 SINE B4 24 147 -18 4 1772 192 125 0 0 chrX 155712996 155713028 -10937268 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1772 326 158 17 42 chrX 155713061 155713142 -10937154 + B3A SINE B2 36 112 -86 4 1772 21 36 0 0 chrX 155713159 155713187 -10937109 + AT_rich Low_complexity Low_complexity 1 28 0 4 1773 193 281 18 0 chrX 155713679 155713736 -10936560 - L2a LINE L2 -1 3425 3368 4 1773 325 272 0 80 chrX 155714040 155714128 -10936168 + ID4 SINE ID 1 81 -2 4 1773 1042 118 7 0 chrX 155714485 155714638 -10935658 + B2_Mm1t SINE B2 2 155 -38 4 1773 326 114 309 16 chrX 155714689 155714799 -10935497 + B2_Mm2 SINE B2 47 188 -7 4 1773 391 282 59 30 chrX 155714835 155714970 -10935326 + B1F SINE Alu 3 141 -8 4 1773 259 256 0 15 chrX 155715219 155715285 -10935011 + MIRc SINE MIR 24 89 -179 4 1773 1050 277 118 25 chrX 155715727 155716397 -10933899 - L1M6 LINE L1 -4614 1882 1151 4 1773 560 222 161 20 chrX 155716857 155717105 -10933191 - L1ME4a LINE L1 -195 5929 5647 4 1773 25 31 0 0 chrX 155717809 155717841 -10932455 + AT_rich Low_complexity Low_complexity 1 32 0 4 1773 540 309 21 14 chrX 155719139 155719280 -10931016 + RSINE1 SINE B4 2 143 -22 4 1773 454 283 95 18 chrX 155719325 155719494 -10930802 + B3A SINE B2 1 182 -16 4 1773 276 347 40 8 chrX 155719549 155719674 -10930622 + L3 LINE CR1 3835 3963 -526 4 1773 1315 86 21 0 chrX 155719693 155719880 -10930416 + B2_Mm1t SINE B2 2 192 -1 4 1773 407 288 170 31 chrX 155720346 155720575 -10929721 - MIRc SINE MIR -5 263 3 4 1773 315 356 72 29 chrX 155720839 155721047 -10929249 - MIRb SINE MIR -26 242 26 4 1773 317 306 0 35 chrX 155721648 155721763 -10928533 - PB1D10 SINE Alu -2 115 5 4 1773 1227 262 96 48 chrX 155721769 155722498 -10927798 - L1ME4a LINE L1 0 6124 5361 4 1773 254 283 111 19 chrX 155722921 155723029 -10927267 - MamRep1161 DNA TcMar -828 129 12 4 1773 522 254 34 0 chrX 155723431 155723549 -10926747 + B1F1 SINE Alu 1 122 -27 4 1773 413 346 15 0 chrX 155723549 155723560 -10926736 + ID_B1 SINE B4 82 212 -12 4 1773 233 274 81 14 chrX 155723693 155723767 -10926529 + L2a LINE L2 3344 3422 -4 4 1773 1199 176 35 0 chrX 155724765 155724964 -10925332 + RLTR41 LTR ERV1 172 377 -69 4 1773 300 328 132 62 chrX 155725014 155725355 -10924941 - MLT1C LTR MaLR -77 390 26 4 1773 459 281 42 20 chrX 155725531 155725665 -10924631 - B1F SINE Alu 0 149 6 4 1773 541 276 30 7 chrX 155725775 155725922 -10924374 - ID_B1 SINE B4 -73 219 71 4 1773 1428 70 0 11 chrX 155726242 155726429 -10923867 - B2_Mm2 SINE B2 -9 186 2 4 1773 901 164 7 0 chrX 155726433 155726579 -10923717 - B1_Mus1 SINE Alu 0 148 2 4 1773 205 348 27 55 chrX 155726744 155726817 -10923479 + L2b LINE L2 3238 3308 -67 4 1773 450 316 11 81 chrX 155727310 155727496 -10922800 + B4A SINE B4 4 176 -116 4 1773 542 298 33 91 chrX 155727775 155727985 -10922311 - MLT1F2 LTR MaLR -49 631 330 4 1773 240 240 40 0 chrX 155727948 155727998 -10922298 + MLT1E1 LTR MaLR 546 597 -57 4 1773 331 335 91 60 chrX 155728014 155728246 -10922050 + MLT1J LTR MaLR 251 489 -23 4 1773 375 289 80 88 chrX 155728708 155728833 -10921463 - PB1 SINE Alu -21 128 5 4 1773 213 39 0 0 chrX 155729184 155729210 -10921086 + (GTTTG)n Simple_repeat Simple_repeat 5 30 0 4 1773 215 273 0 22 chrX 155729211 155729256 -10921040 - B1F1 SINE Alu -101 48 5 4 1773 1241 41 0 0 chrX 155729284 155729431 -10920865 - B1_Mus2 SINE Alu 0 147 1 4 1773 304 329 87 56 chrX 155729618 155729779 -10920517 + HAL1 LINE L1 1734 1899 -608 4 1773 381 246 144 0 chrX 155730062 155730180 -10920116 + B1F SINE Alu 1 135 -14 4 1773 21 36 0 0 chrX 155730310 155730338 -10919958 + AT_rich Low_complexity Low_complexity 1 28 0 4 1773 254 309 18 47 chrX 155731515 155731622 -10918674 - AluG_3 SINE Alu -89 222 10 4 1773 967 85 1 3 chrX 155731622 155731771 -10918525 - B1_Mus2 SINE Alu -3 147 1 4 1773 23 0 0 0 chrX 155732010 155732033 -10918263 + AT_rich Low_complexity Low_complexity 1 23 0 4 1773 760 250 102 25 chrX 155733587 155733598 -10916698 - ID_B1 SINE B4 -1 223 216 4 1773 216 0 0 0 chrX 155733598 155733622 -10916674 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 1773 760 250 102 25 chrX 155733622 155733807 -10916489 - ID_B1 SINE B4 -9 215 12 4 1773 1320 165 9 0 chrX 155733993 155734217 -10916079 + URR1A DNA MER1_type 1 226 0 4 1773 325 275 129 58 chrX 155734276 155734469 -10915827 + MIRb SINE MIR 64 267 -1 4 1773 930 250 23 5 chrX 155734778 155734995 -10915301 + ID_B1 SINE B4 2 222 -2 4 1773 438 274 0 33 chrX 155735746 155735867 -10914429 - PB1D10 SINE Alu 0 117 1 4 1773 201 347 53 0 chrX 155735869 155735944 -10914352 - L2 LINE L2 -601 2818 2740 4 1773 301 267 265 0 chrX 155736139 155736275 -10914021 + MER58A DNA MER1_type 37 208 -16 4 1773 314 324 0 0 chrX 155736371 155736445 -10913851 - ID4 SINE ID 0 83 10 4 1773 329 243 35 70 chrX 155736449 155736564 -10913732 + ID_B1 SINE B4 113 223 -1 4 1773 502 225 132 7 chrX 155736637 155736789 -10913507 - Lx2B LINE L1 -18 6982 6812 4 1773 12888 15 0 0 chrX 155736953 155739155 -10911141 - L1Md_T LINE L1 0 6582 4381 4 1773 4866 14 0 0 chrX 155739146 155739716 -10910580 + L1Md_T LINE L1 3829 4398 -1485 4 1773 234 316 38 38 chrX 155740167 155740246 -10910050 - ID4_ SINE ID -3 80 2 5 1773 279 0 0 0 chrX 155742582 155742613 -10907683 + (TTA)n Simple_repeat Simple_repeat 1 31 0 5 1773 376 208 264 0 chrX 155742614 155742720 -10907576 - B1_Mur3 SINE Alu -15 134 1 5 1773 953 138 7 0 chrX 155742882 155743020 -10907276 + B1_Mur4 SINE Alu 2 140 -10 5 1773 21 0 0 0 chrX 155743308 155743329 -10906967 + AT_rich Low_complexity Low_complexity 1 21 0 5 1773 250 300 0 81 chrX 155743337 155743424 -10906872 + PB1D7 SINE Alu 35 114 -6 5 1773 470 266 8 68 chrX 155743444 155743577 -10906719 + RSINE1 SINE B4 3 127 -38 5 1773 225 0 0 0 chrX 155743583 155743608 -10906688 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 1773 822 230 84 0 chrX 155743647 155743838 -10906458 + B3 SINE B2 3 209 -7 5 1773 296 239 78 17 chrX 155744097 155744212 -10906084 + Lx6 LINE L1 7316 7437 -23 5 1773 1346 75 16 5 chrX 155744213 155744400 -10905896 + B2_Mm2 SINE B2 1 189 -6 5 1773 320 284 35 0 chrX 155744455 155744571 -10905725 + HAL1 LINE L1 1513 1632 -875 5 1773 383 196 51 85 chrX 155744605 155744720 -10905576 + PB1D10 SINE Alu 1 120 0 5 1773 530 233 37 8 chrX 155745405 155745539 -10904757 + B1_Mur1 SINE Alu 1 138 -11 5 1773 241 234 12 38 chrX 155745579 155745659 -10904637 + HAL1 LINE L1 2430 2507 0 5 1773 562 326 6 17 chrX 155745685 155745863 -10904433 + B3A SINE B2 1 176 -22 5 1773 297 316 122 0 chrX 155746885 155746983 -10903313 + PB1D10 SINE Alu 1 110 -7 5 1773 220 296 56 84 chrX 155747081 155747188 -10903108 + MIRb SINE MIR 27 130 -138 5 1773 26 0 0 0 chrX 155747404 155747430 -10902866 + AT_rich Low_complexity Low_complexity 1 26 0 5 1773 1033 23 0 0 chrX 155747431 155747560 -10902736 - L1Md_F3 LINE L1 -16 6568 6440 5 1773 276 280 27 0 chrX 155748101 155748176 -10902120 - ID4_ SINE ID -4 79 3 5 1773 432 261 35 18 chrX 155748246 155748359 -10901937 + PB1D10 SINE Alu 3 117 0 5 1773 462 284 0 35 chrX 155748626 155748739 -10901557 + PB1D10 SINE Alu 1 109 -8 5 1773 555 234 129 6 chrX 155749551 155749714 -10900582 + L1MA5 LINE L1 5946 6128 -172 5 1773 180 0 0 0 chrX 155749715 155749735 -10900561 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5 1773 408 89 10 0 chrX 155749751 155749815 -10900481 - B2_Mm2 SINE B2 -102 114 47 5 1773 1120 112 53 0 chrX 155749843 155750013 -10900283 - B2_Mm1t SINE B2 -14 179 1 5 1773 379 273 96 73 chrX 155750013 155750078 -10900218 + L1MA5 LINE L1 6113 6175 -125 5 1773 325 250 157 11 chrX 155750078 155750167 -10900129 - PB1D10 SINE Alu -15 102 1 5 1773 379 273 96 73 chrX 155750167 155750279 -10900017 + L1MA5 LINE L1 6176 6294 -6 5 1773 2757 42 21 0 chrX 155750345 155750679 -10899617 + L1_Mus1 LINE L1 6225 6565 -2 5 1773 280 125 89 0 chrX 155750685 155750741 -10899555 + Lx9 LINE L1 6936 6996 -648 5 1773 261 206 36 14 chrX 155750823 155750896 -10899400 + PB1D10 SINE Alu 44 120 0 5 1773 291 216 195 39 chrX 155750934 155751011 -10899285 + PB1D10 SINE Alu 21 109 -8 5 1773 461 274 17 8 chrX 155751074 155751192 -10899104 + B1F SINE Alu 25 143 -6 5 1773 264 309 24 24 chrX 155751442 155751525 -10898771 - ID SINE ID -140 84 2 5 1773 305 274 24 12 chrX 155751601 155751686 -10898610 - PB1D7 SINE Alu -2 118 33 5 1773 567 328 71 39 chrX 155752127 155752438 -10897858 + L2 LINE L2 2260 2580 -839 5 1773 183 293 32 9 chrX 155753057 155753144 -10897152 + MIRb SINE MIR 113 203 -65 5 1773 426 246 16 25 chrX 155754238 155754359 -10895937 + PB1D7 SINE Alu 1 120 0 5 1773 524 311 218 25 chrX 155754429 155754672 -10895624 + B4A SINE B4 1 290 -2 5 1773 452 283 15 30 chrX 155755139 155755270 -10895026 + Lx8 LINE L1 7158 7286 -187 5 1773 353 215 12 25 chrX 155755400 155755481 -10894815 + ID4_ SINE ID 2 81 -2 5 1773 924 34 0 0 chrX 155756201 155756318 -10893978 + L1_Mus1 LINE L1 6442 6558 -9 5 1773 1590 102 4 24 chrX 155756956 155757206 -10893090 - Lx2 LINE L1 -6 6991 6747 5 1773 310 80 27 0 chrX 155757206 155757263 -10893033 - Lx2 LINE L1 -354 6643 6596 5 1773 22 56 0 0 chrX 155757697 155757733 -10892563 + AT_rich Low_complexity Low_complexity 1 36 0 5 1773 751 262 16 27 chrX 155757970 155758154 -10892142 + B3 SINE B2 1 182 -34 5 1773 627 298 113 11 chrX 155758277 155758542 -10891754 + B4A SINE B4 1 292 0 5 1773 256 233 67 0 chrX 155758603 155758663 -10891633 + L1MC4 LINE L1 6958 7021 -1021 5 1773 1086 199 0 23 chrX 155758837 155759058 -10891238 + B3 SINE B2 1 216 0 5 1773 776 190 64 18 chrX 155759371 155759542 -10890754 + B3 SINE B2 29 207 -9 5 1773 291 275 69 73 chrX 155759551 155759755 -10890541 - HAL1 LINE L1 -1027 1480 1278 5 1773 1201 194 83 58 chrX 155760199 155760515 -10889781 + ORR1B1 LTR MaLR 2 389 -5 5 1773 235 259 0 0 chrX 155760603 155760657 -10889639 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 1773 6095 55 0 5 chrX 155760766 155761536 -10888760 - L1Md_F2 LINE L1 0 6582 5817 5 1773 996 62 0 0 chrX 155761730 155761860 -10888436 - B1_Mus1 SINE Alu -5 143 14 5 1773 234 232 0 0 chrX 155761901 155761970 -10888326 + Tigger7 DNA MER2_type 2318 2386 -105 5 1773 620 214 0 0 chrX 155762553 155762670 -10887626 + B3A SINE B2 1 117 -81 5 1773 411 21 0 0 chrX 155762692 155762740 -10887556 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 1773 31 26 0 0 chrX 155762764 155762802 -10887494 + AT_rich Low_complexity Low_complexity 1 38 0 5 1773 204 40 0 0 chrX 155763305 155763330 -10886966 + (TTG)n Simple_repeat Simple_repeat 2 26 0 5 1773 585 252 26 13 chrX 155763347 155763500 -10886796 - RSINE1 SINE B4 -8 157 3 5 1773 452 329 0 53 chrX 155763673 155763824 -10886472 - ID_B1 SINE B4 -2 222 80 5 1773 200 235 13 93 chrX 155764063 155764138 -10886158 - MIRc SINE MIR -114 154 86 5 1773 23 68 0 0 chrX 155764703 155764747 -10885549 + AT_rich Low_complexity Low_complexity 1 44 0 5 1773 1145 54 0 20 chrX 155765303 155765453 -10884843 + B1_Mus2 SINE Alu 1 147 0 5 1773 916 163 0 7 chrX 155766604 155766752 -10883544 - B1_Mus1 SINE Alu -1 147 1 5 1773 352 188 141 0 chrX 155766967 155767031 -10883265 - RSINE1 SINE B4 -91 74 2 5 1773 615 213 56 21 chrX 155767454 155767598 -10882698 + B1_Mur2 SINE Alu 1 149 0 5 1773 393 288 16 25 chrX 155767819 155767940 -10882356 + PB1 SINE Alu 1 120 -7 5 1773 974 135 101 72 chrX 155767955 155768163 -10882133 + B3 SINE B2 3 216 0 5 1773 303 241 149 0 chrX 155768166 155768253 -10882043 + PB1D7 SINE Alu 21 120 0 5 1773 24 53 0 0 chrX 155768607 155768645 -10881651 + AT_rich Low_complexity Low_complexity 1 38 0 5 1773 771 266 10 40 chrX 155769073 155769273 -10881023 - RMER30 DNA MER1_type -7 195 2 5 1773 1373 85 11 0 chrX 155769441 155769630 -10880666 - B2_Mm1t SINE B2 -2 191 1 5 1773 37 23 0 0 chrX 155769678 155769722 -10880574 + AT_rich Low_complexity Low_complexity 1 44 0 5 1773 1366 95 16 0 chrX 155769722 155769911 -10880385 + B2_Mm2 SINE B2 2 193 -2 5 1773 1252 68 39 22 chrX 155770207 155770363 -10879933 + B2_Mm2 SINE B2 1 160 -35 5 1773 219 36 0 0 chrX 155770363 155770391 -10879905 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 5 1773 1252 68 39 22 chrX 155770391 155770415 -10879881 + B2_Mm2 SINE B2 161 184 -11 5 1773 266 295 43 35 chrX 155770661 155770777 -10879519 - PB1D10 SINE Alu 0 117 1 5 1773 204 40 0 0 chrX 155771869 155771894 -10878402 + (TTGG)n Simple_repeat Simple_repeat 2 26 0 5 1773 283 234 31 0 chrX 155771899 155771963 -10878333 - tRNA-Ala-GCY_ tRNA tRNA -9 66 1 5 1773 1088 65 13 1 chrX 155772205 155772354 -10877942 - B1_Mus1 SINE Alu -1 147 2 5 1773 3903 132 19 6 chrX 155772842 155773481 -10876815 - Lx4B LINE L1 -17 7041 6395 5 1773 1345 180 4 25 chrX 155773485 155773764 -10876532 - Lx4B LINE L1 -780 6278 6006 5 1773 766 254 35 5 chrX 155773924 155774122 -10876174 + B3 SINE B2 1 204 -12 5 1773 565 178 85 8 chrX 155774277 155774407 -10875889 + L1MD2 LINE L1 5669 5808 -2187 5 1773 369 331 13 13 chrX 155774402 155774558 -10875738 + L1MD2 LINE L1 6102 6257 -102 5 1773 410 261 36 9 chrX 155775406 155775518 -10874778 - MER3 DNA MER1_type -62 147 33 5 1773 230 325 92 11 chrX 155776343 155776409 -10873887 - MER58A DNA MER1_type -36 188 116 5 1773 283 302 62 78 chrX 155776409 155776538 -10873758 + B1F1 SINE Alu 4 130 -19 5 1773 366 236 0 0 chrX 155776564 155776636 -10873660 - MER58A DNA MER1_type -110 114 43 5 1773 743 240 22 139 chrX 155776628 155776778 -10873518 - MTD LTR MaLR -157 222 81 5 1773 897 73 138 0 chrX 155776778 155776901 -10873395 + B1_Mus1 SINE Alu 1 140 -8 5 1773 743 211 5 153 chrX 155776901 155776981 -10873315 - MTD LTR MaLR -299 120 57 5 1773 273 206 108 11 chrX 155777200 155777293 -10873003 + L1MA5 LINE L1 6199 6300 0 5 1773 22 35 0 0 chrX 155777297 155777326 -10872970 + AT_rich Low_complexity Low_complexity 1 29 0 5 1773 8111 70 14 16 chrX 155777350 155778779 -10871517 - L1_Mus3 LINE L1 -1 6637 5218 5 1773 468 0 0 0 chrX 155778916 155778968 -10871328 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1773 252 303 0 26 chrX 155778984 155779062 -10871234 - ID4_ SINE ID -6 77 2 5 1773 613 263 38 32 chrX 155779602 155779759 -10870537 + B3A SINE B2 25 182 -16 5 1773 201 182 0 0 chrX 155779759 155779792 -10870504 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 1773 386 302 19 20 chrX 155779793 155779953 -10870343 + Lx7 LINE L1 7118 7267 -429 5 1773 645 137 56 16 chrX 155780145 155780271 -10870025 + Lx3B LINE L1 6839 6969 -4 5 1773 344 253 51 0 chrX 155780740 155780819 -10869477 + PB1D10 SINE Alu 35 117 0 5 1773 25 0 0 0 chrX 155781173 155781198 -10869098 + AT_rich Low_complexity Low_complexity 1 25 0 5 1773 433 234 56 16 chrX 155781895 155782021 -10868275 + ID_B1 SINE B4 85 215 -9 5 1773 913 224 6 0 chrX 155782059 155782233 -10868063 + B3 SINE B2 2 176 -40 6 1773 671 292 33 22 chrX 155782252 155782434 -10867862 + B3 SINE B2 28 211 -5 6 1773 198 103 0 0 chrX 155782441 155782470 -10867826 + (TATATG)n Simple_repeat Simple_repeat 3 31 0 6 1773 1093 60 75 0 chrX 155782532 155782666 -10867630 + B1_Mus2 SINE Alu 2 145 -2 6 1773 361 36 0 18 chrX 155783545 155783601 -10866695 - Lx LINE L1 -4 6650 6596 6 1773 615 226 156 34 chrX 155783857 155784045 -10866251 + B3A SINE B2 3 195 0 6 1773 780 110 212 0 chrX 155784046 155784164 -10866132 + B1_Mus1 SINE Alu 1 143 -5 6 1773 231 279 123 62 chrX 155784462 155784592 -10865704 + L2c LINE L2 3066 3203 -184 6 1773 890 273 55 18 chrX 155785674 155785946 -10864350 - B4 SINE B4 -2 290 9 6 1773 1210 131 44 0 chrX 155786308 155786491 -10863805 + B2_Mm2 SINE B2 1 191 -4 6 1773 215 306 25 90 chrX 155786804 155786939 -10863357 + L2c LINE L2 3243 3387 0 6 1773 520 223 43 26 chrX 155787642 155787757 -10862539 - PB1D7 SINE Alu -3 117 1 6 1773 997 92 7 0 chrX 155788176 155788318 -10861978 + B2_Mm1t SINE B2 37 179 -14 6 1773 413 111 343 57 chrX 155788365 155788470 -10861826 + B2_Mm2 SINE B2 47 181 -14 6 1773 451 318 15 22 chrX 155788496 155788631 -10861665 + ID_B1 SINE B4 84 217 -7 6 1773 750 190 20 66 chrX 155788695 155788847 -10861449 + B1_Mur1 SINE Alu 3 147 -2 6 1773 243 0 0 0 chrX 155788937 155788964 -10861332 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 1773 337 188 229 98 chrX 155789109 155789262 -10861034 + B2_Mm2 SINE B2 4 176 -19 6 1773 353 119 60 36 chrX 155789492 155789658 -10860638 + (TA)n Simple_repeat Simple_repeat 2 171 0 6 1773 191 36 0 35 chrX 155789683 155789712 -10860584 + (TA)n Simple_repeat Simple_repeat 1 28 0 6 1773 661 206 20 60 chrX 155789770 155789920 -10860376 - B1_Mur1 SINE Alu -5 144 1 6 1773 192 125 0 0 chrX 155790451 155790483 -10859813 + (T)n Simple_repeat Simple_repeat 1 32 0 6 1773 1412 216 188 11 chrX 155790515 155790876 -10859420 - Lx6 LINE L1 -30 7430 7006 6 1773 310 226 102 45 chrX 155790908 155790985 -10859311 - Lx6 LINE L1 -368 7092 7007 6 1773 357 24 0 0 chrX 155790985 155791027 -10859269 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 6 1773 303 226 0 61 chrX 155791064 155791119 -10859177 - Lx6 LINE L1 -399 7061 7007 6 1773 285 29 0 0 chrX 155791119 155791153 -10859143 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 1773 354 190 42 1917 chrX 155791153 155791245 -10859051 - Lx6 LINE L1 -399 7061 7000 6 1773 342 0 0 0 chrX 155791245 155791283 -10859013 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 6 1773 7011 146 63 7 chrX 155791284 155792417 -10857879 - Lx3C LINE L1 -16 6960 5765 6 1773 3167 96 12 16 chrX 155792421 155792910 -10857386 + L1_Mur1 LINE L1 2924 3410 -2476 6 1773 352 267 22 8 chrX 155792959 155793076 -10857220 - Lx6 LINE L1 -564 6896 6816 6 1773 855 259 40 5 chrX 155793199 155793401 -10856895 + B3 SINE B2 1 209 -7 6 1773 589 252 8 0 chrX 155793436 155793555 -10856741 - MTD LTR MaLR -297 122 3 6 1773 7963 26 1 0 chrX 155794210 155795081 -10855215 + L1Md_A LINE L1 5711 6582 0 6 1773 3826 42 2 24 chrX 155795080 155795539 -10854757 + L1Md_F2 LINE L1 6131 6579 -3 6 1773 1608 68 5 0 chrX 155795976 155796168 -10854128 - B2_Mm1t SINE B2 0 193 1 6 1773 729 167 64 21 chrX 155796523 155796664 -10853632 + B1_Mus1 SINE Alu 1 147 -1 6 1773 195 42 0 0 chrX 155796667 155796691 -10853605 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1773 2142 36 20 0 chrX 155796747 155796999 -10853297 - L1Md_F2 LINE L1 -1 6581 6325 6 1773 2546 96 16 0 chrX 155797821 155798143 -10852153 - ORR1A2 LTR MaLR 0 327 1 6 1773 232 243 153 28 chrX 155798336 155798408 -10851888 + ID4 SINE ID 2 82 -1 6 1773 536 264 24 16 chrX 155798566 155798689 -10851607 - PB1 SINE Alu -3 124 1 6 1773 198 0 0 0 chrX 155798735 155798757 -10851539 + (TAA)n Simple_repeat Simple_repeat 2 23 0 6 1773 236 318 88 36 chrX 155798864 155799001 -10851295 + B1_Mus1 SINE Alu 3 146 -2 6 1773 1182 160 270 23 chrX 155799267 155799567 -10850729 - ORR1D1 LTR MaLR 0 374 1 6 1773 215 280 118 13 chrX 155799710 155799786 -10850510 + PB1D7 SINE Alu 32 115 -5 6 1773 3039 44 93 0 chrX 155799914 155800280 -10850016 - MTB LTR MaLR 0 400 1 6 1773 484 288 48 0 chrX 155806784 155806909 -10843387 - B1F1 SINE Alu -8 141 11 6 1773 686 220 13 13 chrX 155806933 155807085 -10843211 - L1MB8 LINE L1 -6 6172 6021 6 1773 288 252 94 17 chrX 155807088 155807205 -10843091 + L2a LINE L2 2689 2814 -605 6 1773 1157 210 173 23 chrX 155807301 155807665 -10842631 - MTD LTR MaLR 0 419 1 6 1773 205 324 42 0 chrX 155807711 155807782 -10842514 + L2a LINE L2 3035 3108 -318 6 1773 262 301 37 37 chrX 155807961 155808068 -10842228 - MIRb SINE MIR -128 140 34 6 1773 231 254 79 26 chrX 155808250 155808354 -10841942 - B1_Mus2 SINE Alu 0 117 1 6 1773 488 204 28 28 chrX 155808423 155808529 -10841767 - MER20 DNA MER1_type -75 144 39 6 1773 568 226 40 8 chrX 155808685 155808810 -10841486 - RSINE1 SINE B4 -35 130 2 6 1773 409 301 23 136 chrX 155808857 155808940 -10841356 - MLT1B LTR MaLR -1 389 315 6 1773 800 208 7 0 chrX 155808940 155809084 -10841212 - B1F SINE Alu 0 149 5 6 1773 409 301 23 136 chrX 155809084 155809177 -10841119 - MLT1B LTR MaLR -76 314 233 6 1773 544 198 26 26 chrX 155809244 155809358 -10840938 - PB1D9 SINE Alu 0 120 7 6 1773 332 240 59 74 chrX 155809269 155809404 -10840892 - MT2B LTR ERVL -350 251 119 6 1773 229 253 156 33 chrX 155809388 155809478 -10840818 - MLT1B LTR MaLR -345 122 22 6 1773 24 53 0 0 chrX 155809860 155809898 -10840398 + GC_rich Low_complexity Low_complexity 1 38 0 6 1773 300 27 0 0 chrX 155810043 155810080 -10840216 + (CGGG)n Simple_repeat Simple_repeat 4 40 0 6 1773 205 189 0 0 chrX 155810081 155810118 -10840178 + GA-rich Low_complexity Low_complexity 1 37 0 6 1773 328 220 10 117 chrX 155811118 155811221 -10839075 - PB1D10 SINE Alu -19 108 17 6 1773 394 203 87 74 chrX 155811307 155811456 -10838840 + ID_B1 SINE B4 72 222 -2 6 1773 689 114 93 18 chrX 155811325 155811461 -10838835 + B1_Mus1 SINE Alu 5 150 0 6 1773 583 180 63 21 chrX 155811502 155811644 -10838652 + B3A SINE B2 48 195 -3 6 1773 264 237 24 38 chrX 155811827 155811938 -10838358 + Lx3C LINE L1 6742 6853 -147 6 1773 36 0 0 0 chrX 155811947 155811983 -10838313 + AT_rich Low_complexity Low_complexity 1 36 0 6 1773 224 121 0 0 chrX 155812006 155812039 -10838257 - PB1D10 SINE Alu -20 97 65 6 1773 225 356 210 14 chrX 155812146 155812365 -10837931 + L2b LINE L2 3105 3366 -9 6 1773 216 0 0 0 chrX 155812661 155812685 -10837611 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 6 1773 649 107 78 35 chrX 155812685 155812792 -10837504 - B1_Mur4 SINE Alu -13 137 24 6 1773 283 118 57 54 chrX 155812903 155812977 -10837319 - L1MC LINE L1 -338 5841 5765 6 1773 701 242 56 23 chrX 155812989 155813188 -10837108 + B3 SINE B2 2 189 -6 6 1773 548 276 0 0 chrX 155813380 155813496 -10836800 + PB1D7 SINE Alu 3 118 -2 6 1773 203 312 39 59 chrX 155813583 155813685 -10836611 + MIRb SINE MIR 54 156 -112 6 1773 430 251 106 12 chrX 155813766 155814074 -10836222 + Lx7 LINE L1 7250 7621 -75 6 1773 1195 111 36 57 chrX 155814607 155814799 -10835497 - B2_Mm2 SINE B2 -6 189 2 6 1773 382 235 18 105 chrX 155814800 155814914 -10835382 + PB1D9 SINE Alu 12 115 -5 6 1773 1009 84 61 0 chrX 155815540 155815671 -10834625 + B1_Mus2 SINE Alu 1 139 -8 6 1773 230 299 0 61 chrX 155815745 155815827 -10834469 - ID4_ SINE ID -6 77 1 6 1773 231 193 144 22 chrX 155815895 155815985 -10834311 + L1MC4 LINE L1 7537 7637 -405 6 1773 1406 92 16 5 chrX 155816160 155816345 -10833951 - B2_Mm2 SINE B2 -8 187 1 6 1773 278 180 77 39 chrX 155816841 155816945 -10833351 - Lx5 LINE L1 0 7050 6943 6 1773 369 252 101 0 chrX 155816954 155817053 -10833243 - MTE2b LTR MaLR -39 340 232 6 1773 3010 56 75 0 chrX 155818099 155818474 -10831822 + L1_Mus1 LINE L1 6165 6567 0 6 1773 267 133 0 0 chrX 155819088 155819133 -10831163 + (TTTTC)n Simple_repeat Simple_repeat 2 46 0 6 1773 234 0 0 0 chrX 155819330 155819356 -10830940 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1773 1313 48 0 0 chrX 155819356 155819503 -10830793 - B1_Mus2 SINE Alu 0 147 1 6 1773 22 0 0 0 chrX 155819521 155819543 -10830753 + AT_rich Low_complexity Low_complexity 1 22 0 6 1773 1291 79 77 22 chrX 155819834 155820015 -10830281 + B2_Mm1t SINE B2 2 192 -1 6 1773 1223 51 0 0 chrX 155820033 155820171 -10830125 + B1_Mm SINE Alu 1 138 -9 6 1773 296 301 83 12 chrX 155821001 155821085 -10829211 + B1F1 SINE Alu 34 123 -26 6 1773 23 68 0 0 chrX 155821218 155821262 -10829034 + AT_rich Low_complexity Low_complexity 1 44 0 6 1773 422 247 0 0 chrX 155821337 155821422 -10828874 - B3 SINE B2 -86 130 46 6 1773 531 214 243 29 chrX 155821448 155821621 -10828675 + B3 SINE B2 3 212 -4 6 1773 664 256 67 22 chrX 155821970 155822150 -10828146 - B3A SINE B2 -2 196 9 6 1773 858 50 244 0 chrX 155822198 155822317 -10827979 + B1_Mus1 SINE Alu 1 148 0 6 1773 522 113 0 0 chrX 155822804 155822901 -10827395 + (TG)n Simple_repeat Simple_repeat 2 98 0 6 1773 516 269 17 0 chrX 155822903 155823022 -10827274 - B3A SINE B2 -53 145 25 6 1773 435 278 111 15 chrX 155823743 155823878 -10826418 - B1F1 SINE Alu 0 149 2 6 1773 804 150 0 43 chrX 155824070 155824209 -10826087 - B1_Mur4 SINE Alu -10 140 8 6 1773 597 241 14 21 chrX 155826029 155826169 -10824127 - ID_B1 SINE B4 0 224 86 7 1773 277 294 81 12 chrX 155827920 155828006 -10822290 - PB1D10 SINE Alu -13 104 13 7 1773 232 336 46 23 chrX 155827942 155828073 -10822223 - MT2B LTR ERVL -360 241 108 7 1773 267 248 237 14 chrX 155828151 155828290 -10822006 - MER21B LTR ERV1 -88 775 606 7 1773 2250 151 268 15 chrX 155828316 155828852 -10821444 - RMER1A Other Other -10 1020 349 7 1773 1276 48 0 0 chrX 155828890 155829036 -10821260 - B1_Mus2 SINE Alu -1 146 1 7 1773 329 262 0 137 chrX 155829321 155829445 -10820851 + B4A SINE B4 185 291 -1 7 1773 355 270 11 33 chrX 155829465 155829557 -10820739 + PB1D10 SINE Alu 2 91 -26 7 1773 594 298 46 7 chrX 155829567 155829719 -10820577 + ID_B1 SINE B4 49 206 -18 7 1773 239 228 53 0 chrX 155829719 155829776 -10820520 + GA-rich Low_complexity Low_complexity 1 60 0 7 1773 461 213 120 0 chrX 155829782 155829890 -10820406 + B1F SINE Alu 1 121 -28 7 1773 573 308 65 93 chrX 155830032 155830311 -10819985 - MTEb LTR MaLR -55 324 54 7 1773 218 234 30 30 chrX 155830309 155830375 -10819921 - B4A SINE B4 -226 66 1 7 1773 1250 41 0 7 chrX 155830499 155830646 -10819650 + B1_Mm SINE Alu 2 147 0 7 1773 230 259 0 17 chrX 155830646 155830705 -10819591 + (CAA)n Simple_repeat Simple_repeat 2 59 0 7 1773 1096 186 67 0 chrX 155830742 155830935 -10819361 + B3 SINE B2 1 206 -10 7 1773 804 234 94 0 chrX 155831178 155831308 -10818988 + B3A SINE B2 1 141 -57 7 1773 342 0 0 0 chrX 155831308 155831346 -10818950 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1773 804 234 94 0 chrX 155831346 155831386 -10818910 + B3A SINE B2 142 186 -12 7 1773 257 272 11 69 chrX 155831492 155831579 -10818717 - BC1_Mm scRNA scRNA -69 83 2 7 1773 499 231 33 113 chrX 155831672 155831823 -10818473 + B1_Mur1 SINE Alu 6 144 -5 7 1773 258 292 43 33 chrX 155831851 155831952 -10818344 + B1_Mus2 SINE Alu 3 103 -14 7 1773 374 283 76 0 chrX 155831999 155832091 -10818205 + PB1 SINE Alu 3 101 -26 7 1773 262 202 209 9 chrX 155832177 155832292 -10818004 + Charlie1a DNA MER1_type 1089 1226 -229 7 1773 200 150 75 0 chrX 155832338 155832378 -10817918 + (CAGAGA)n Simple_repeat Simple_repeat 4 46 0 7 1773 441 144 0 0 chrX 155832405 155832495 -10817801 + (CGGGGG)n Simple_repeat Simple_repeat 2 91 0 7 1773 369 174 73 42 chrX 155832496 155832592 -10817704 + B1_Mur4 SINE Alu 43 141 -9 7 1773 616 140 0 39 chrX 155832621 155832740 -10817556 + B1_Mur4 SINE Alu 2 112 -37 7 1773 422 268 72 0 chrX 155832724 155832821 -10817475 + B3 SINE B2 107 210 -6 7 1773 453 294 12 59 chrX 155832947 155833117 -10817179 + RSINE1 SINE B4 4 165 0 7 1773 225 0 0 0 chrX 155833133 155833158 -10817138 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 1773 859 153 88 0 chrX 155833173 155833310 -10816986 - B1_Mur3 SINE Alu 0 149 1 7 1773 463 282 16 0 chrX 155833388 155833512 -10816784 - ID_B1 SINE B4 0 224 99 7 1773 759 133 9 0 chrX 155833721 155833834 -10816462 + B3 SINE B2 2 115 -101 7 1773 1343 91 46 0 chrX 155834097 155834272 -10816024 - B2_Mm1t SINE B2 -9 184 2 7 1773 521 176 9 0 chrX 155834289 155834397 -10815899 + CT-rich Low_complexity Low_complexity 2 110 0 7 1773 585 258 16 0 chrX 155834401 155834529 -10815767 - B3A SINE B2 -36 162 33 7 1773 250 264 83 28 chrX 155834508 155834580 -10815716 - B3A SINE B2 -78 120 43 7 1773 1453 51 86 0 chrX 155834580 155834738 -10815558 + B2_Mm1a SINE B2 3 160 -33 7 1773 315 0 0 0 chrX 155834738 155834773 -10815523 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 7 1773 1453 51 86 0 chrX 155834773 155834789 -10815507 + B2_Mm1a SINE B2 161 190 -3 7 1773 250 264 83 28 chrX 155834789 155834825 -10815471 - B3A SINE B2 -156 42 7 7 1773 240 35 0 0 chrX 155834850 155834879 -10815417 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 7 1773 491 346 65 27 chrX 155834948 155835209 -10815087 - B4A SINE B4 -21 271 1 7 1773 504 183 116 0 chrX 155835302 155835414 -10814882 + B1_Mur1 SINE Alu 1 123 -26 7 1773 324 0 0 0 chrX 155835440 155835476 -10814820 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 7 1773 1240 62 0 0 chrX 155835476 155835620 -10814676 - B1_Mm SINE Alu -3 144 1 7 1773 371 305 0 0 chrX 155835672 155835754 -10814542 + B3 SINE B2 59 140 -76 7 1773 238 288 96 0 chrX 155835893 155835966 -10814330 + ID2 SINE ID 2 81 -2 7 1773 38931 10 0 7 chrX 155836127 155841307 -10808989 + L1Md_A LINE L1 449 5586 -297 7 1773 9430 13 0 0 chrX 155841307 155842303 -10807993 + L1Md_A LINE L1 5587 6582 0 7 1773 432 300 27 0 chrX 155842314 155842424 -10807872 + PB1D10 SINE Alu 1 113 -4 7 1773 848 129 7 21 chrX 155842444 155842586 -10807710 + RMER6B LTR ERVK 322 461 0 7 1773 1328 28 0 0 chrX 155842591 155842736 -10807560 + B1_Mus1 SINE Alu 2 146 -2 7 1773 197 33 0 32 chrX 155842736 155842767 -10807529 + (CAAAC)n Simple_repeat Simple_repeat 2 31 0 7 1773 1802 186 62 3 chrX 155842775 155843115 -10807181 - Lx9 LINE L1 -374 7270 6911 7 1773 857 239 178 10 chrX 155843114 155843406 -10806890 + Lx9 LINE L1 6163 6503 -1141 7 1773 742 201 14 20 chrX 155843436 155843583 -10806713 + B1_Mur1 SINE Alu 4 149 0 7 1773 263 49 0 24 chrX 155843583 155843625 -10806671 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 7 1773 397 244 0 62 chrX 155844010 155844106 -10806190 + PB1D10 SINE Alu 10 99 -18 7 1773 1290 54 0 0 chrX 155844115 155844262 -10806034 - B1_Mus2 SINE Alu 0 147 1 7 221 934 239 101 98 chrX 155844303 155844692 -10805604 + MT2B LTR ERVL 1 460 -141 7 1774 1767 31 0 0 chrX 155844692 155844883 -10805413 - B2_Mm1t SINE B2 -2 191 1 7 1774 934 230 89 106 chrX 155844883 155844979 -10805317 + MT2B LTR ERVL 461 561 -40 7 1774 311 70 0 44 chrX 155845048 155845093 -10805203 + MT2B LTR ERVL 535 577 -7 7 1774 464 314 21 0 chrX 155845149 155845289 -10805007 + B1F2 SINE Alu 5 147 -2 7 1774 447 162 390 7 chrX 155845563 155845699 -10804597 + B3 SINE B2 4 191 -25 7 1774 237 280 40 0 chrX 155845700 155845750 -10804546 - B1_Mur2 SINE Alu -45 104 53 7 1774 29 0 0 0 chrX 155845786 155845815 -10804481 + AT_rich Low_complexity Low_complexity 1 29 0 7 1774 475 265 151 29 chrX 155845824 155846069 -10804227 + Lx9 LINE L1 7368 7642 -2 7 1774 1012 212 91 0 chrX 155846101 155846299 -10803997 + B3 SINE B2 1 216 0 7 1774 1547 64 16 0 chrX 155846414 155846602 -10803694 + B2_Mm1t SINE B2 1 191 -2 7 1774 599 165 64 9 chrX 155846936 155847046 -10803250 - B1_Mus2 SINE Alu -9 138 23 7 1774 465 191 0 0 chrX 155847056 155847140 -10803156 - ID_B1 SINE B4 -2 222 139 7 1774 478 308 8 24 chrX 155847195 155847318 -10802978 + ID_B1 SINE B4 99 219 -5 7 1774 680 155 205 30 chrX 155847335 155847501 -10802795 + B2_Mm2 SINE B2 1 195 0 7 1774 684 206 88 0 chrX 155847570 155847706 -10802590 + B1_Mur3 SINE Alu 1 148 -1 7 1774 662 288 17 12 chrX 155847811 155847983 -10802313 - ID_B1 SINE B4 -1 223 51 7 1774 594 0 0 0 chrX 155847994 155848060 -10802236 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 7 1774 223 259 74 0 chrX 155848499 155848553 -10801743 - ID SINE ID -164 60 3 7 1774 326 247 12 49 chrX 155848555 155848607 -10801689 - L1MB5 LINE L1 -109 6065 6013 7 1774 1101 66 0 0 chrX 155848607 155848758 -10801538 + (TTCTC)n Simple_repeat Simple_repeat 2 152 0 7 1774 324 0 0 0 chrX 155848758 155848794 -10801502 + (CCCTG)n Simple_repeat Simple_repeat 2 37 0 7 1774 326 247 12 49 chrX 155848794 155848821 -10801475 - L1MB5 LINE L1 -162 6012 5989 7 1774 264 196 35 18 chrX 155848839 155848896 -10801400 - MTC LTR MaLR -363 58 1 7 1774 368 269 185 35 chrX 155848964 155849217 -10801079 - B4A SINE B4 -1 291 1 7 1774 266 211 53 0 chrX 155849393 155849469 -10800827 + CT-rich Low_complexity Low_complexity 1 80 0 7 1774 472 198 79 4 chrX 155849469 155849580 -10800716 - B1F SINE Alu -21 127 13 7 1774 2872 47 197 3 chrX 155849647 155850012 -10800284 + RLTR10C LTR ERVK 1 436 0 7 1774 620 236 8 0 chrX 155850017 155850144 -10800152 - B1_Mur1 SINE Alu -18 131 4 7 1774 256 265 13 105 chrX 155850176 155850252 -10800044 - ID4 SINE ID -14 69 1 7 1774 215 365 0 0 chrX 155850325 155850410 -10799886 + B4A SINE B4 64 148 -144 7 1774 819 277 95 35 chrX 155850644 155851107 -10799189 + L1MA6 LINE L1 5414 5904 -396 7 1774 429 220 0 99 chrX 155851114 155851215 -10799081 + PB1D10 SINE Alu 1 91 -26 7 1774 240 86 0 0 chrX 155851237 155851272 -10799024 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1774 340 272 83 56 chrX 155851276 155851420 -10798876 + B1F SINE Alu 1 148 -1 7 1774 532 222 197 0 chrX 155851586 155851703 -10798593 + B1F SINE Alu 2 141 -8 7 1774 947 100 14 0 chrX 155851721 155851861 -10798435 + B1_Mus1 SINE Alu 7 148 0 7 1774 423 106 0 0 chrX 155852648 155852714 -10797582 + (CGG)n Simple_repeat Simple_repeat 1 66 0 7 1774 23 0 0 0 chrX 155852862 155852885 -10797411 + GC_rich Low_complexity Low_complexity 1 23 0 7 1774 901 308 39 4 chrX 155854722 155855002 -10795294 - B4 SINE B4 -2 290 1 7 1774 948 93 90 30 chrX 155855012 155855179 -10795117 - B2_Mm2 SINE B2 -10 185 9 7 1774 845 96 36 22 chrX 155855175 155855313 -10794983 - B1_Mus1 SINE Alu 0 148 9 7 1774 480 254 113 9 chrX 155855584 155855699 -10794597 - B1F1 SINE Alu -22 127 1 7 1774 298 327 8 60 chrX 155855599 155855716 -10794580 - ID_B1 SINE B4 -46 178 68 7 1774 1467 60 39 0 chrX 155855718 155855900 -10794396 - B2_Mm2 SINE B2 -5 190 2 7 1774 210 162 0 0 chrX 155855920 155855957 -10794339 + T-rich Low_complexity Low_complexity 5 41 0 7 1774 1147 62 21 7 chrX 155855957 155856102 -10794194 - B1_Mus1 SINE Alu 0 148 2 7 1774 367 214 0 14 chrX 155856245 155856316 -10793980 + L1M2 LINE L1 5698 5767 -533 7 1774 362 263 154 26 chrX 155856320 155856437 -10793859 + ID_B1 SINE B4 87 218 -6 8 1774 435 279 87 19 chrX 155856461 155856680 -10793616 + Lx8 LINE L1 5692 5969 -1675 8 1774 428 254 137 50 chrX 155856784 155856966 -10793330 + B3A SINE B2 1 198 0 8 1774 1045 236 18 22 chrX 155857193 155857418 -10792878 - ID_B1 SINE B4 0 224 1 8 1774 382 256 0 25 chrX 155857556 155857636 -10792660 + ID4_ SINE ID 1 78 -5 8 1774 1164 62 14 0 chrX 155857709 155857853 -10792443 + B1_Mus2 SINE Alu 2 147 0 8 1774 926 205 0 24 chrX 155858580 155858745 -10791551 + B3A SINE B2 2 162 -36 8 1774 464 252 48 0 chrX 155858944 155859047 -10791249 - B1F1 SINE Alu -41 108 1 8 1774 471 226 240 18 chrX 155859406 155859577 -10790719 - B3 SINE B2 -7 209 1 8 1774 224 277 0 15 chrX 155859601 155859667 -10790629 - ID4_ SINE ID -60 92 28 8 1774 1473 79 5 10 chrX 155859746 155859938 -10790358 + B2_Mm1t SINE B2 3 193 0 8 1774 313 117 33 0 chrX 155860574 155860634 -10789662 + (TCC)n Simple_repeat Simple_repeat 3 64 0 8 1774 1124 72 14 28 chrX 155860636 155860779 -10789517 - B1_Mus1 SINE Alu -7 141 1 8 1774 1248 61 0 7 chrX 155861222 155861370 -10788926 - B1_Mus2 SINE Alu 0 147 1 8 1774 27 0 0 0 chrX 155862021 155862048 -10788248 + AT_rich Low_complexity Low_complexity 1 27 0 8 1774 35 0 0 0 chrX 155863668 155863703 -10786593 + AT_rich Low_complexity Low_complexity 1 35 0 8 1774 3575 63 40 0 chrX 155863707 155864135 -10786161 - L1_Mus2 LINE L1 -2 6564 6120 8 1774 1859 159 121 44 chrX 155864238 155864625 -10785671 - MTC LTR MaLR 0 421 5 8 1774 2020 181 63 19 chrX 155864628 155864833 -10785463 - MTC-int LTR MaLR 0 1258 1049 8 1774 1737 21 0 5 chrX 155864833 155865021 -10785275 + B2_Mm1a SINE B2 1 187 -6 8 1774 2020 181 63 19 chrX 155865021 155865277 -10785019 - MTC-int LTR MaLR -210 1048 778 8 1774 538 83 0 0 chrX 155865277 155865349 -10784947 - MERVL_2A-int LTR ERVL -1159 4602 4531 8 1774 5467 130 37 4 chrX 155865346 155866174 -10784122 - MERVL_2A-int LTR ERVL -3016 2745 1890 8 1774 834 115 92 0 chrX 155866176 155866306 -10783990 - MTC LTR MaLR -279 142 1 8 1774 28 0 0 0 chrX 155866488 155866516 -10783780 + AT_rich Low_complexity Low_complexity 1 28 0 8 1774 443 250 121 137 chrX 155866530 155866720 -10783576 - ID_B1 SINE B4 -1 223 37 8 1774 808 131 0 0 chrX 155866722 155866852 -10783444 - MusHAL1 LINE L1 -1009 1703 1574 8 1774 6059 69 7 14 chrX 155866852 155867601 -10782695 + L1_Mus1 LINE L1 5145 5888 -679 8 1774 1241 22 0 0 chrX 155867601 155867736 -10782560 + B1_Mm SINE Alu 2 136 -11 8 1774 245 51 0 25 chrX 155867736 155867776 -10782520 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 1774 6059 42 15 22 chrX 155867776 155868228 -10782068 + L1_Mus1 LINE L1 5889 6334 -233 8 1774 6413 73 11 0 chrX 155868237 155869076 -10781220 - L1VL2 LINE L1 -5331 1004 157 8 1774 226 254 67 119 chrX 155869077 155869211 -10781085 - LTR48 LTR ERV1 -283 504 378 8 1774 1482 219 90 18 chrX 155869243 155869586 -10780710 - ORR1D1 LTR MaLR -6 368 1 8 1774 494 273 0 50 chrX 155869766 155869896 -10780400 + B1F SINE Alu 13 136 -13 8 1774 189 0 0 0 chrX 155869896 155869917 -10780379 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 8 1774 799 266 39 5 chrX 155869925 155870133 -10780163 + B3 SINE B2 2 216 0 8 1774 1814 217 109 15 chrX 155870231 155870754 -10779542 - L1MB4 LINE L1 -2 6178 5607 8 1774 342 213 0 39 chrX 155871139 155871217 -10779079 - HAL1-3A_ME LINE L1 -809 2049 1975 8 1774 234 0 0 0 chrX 155871358 155871384 -10778912 + (T)n Simple_repeat Simple_repeat 1 26 0 8 1774 963 62 139 0 chrX 155871384 155871513 -10778783 - B1_Mm SINE Alu 0 147 1 8 1774 378 331 0 62 chrX 155871731 155871876 -10778420 - B1F2 SINE Alu 0 149 14 8 1774 507 337 11 58 chrX 155871777 155871966 -10778330 - ID_B1 SINE B4 -34 190 11 8 1774 492 254 64 32 chrX 155872017 155872204 -10778092 - L1MB8 LINE L1 -41 6137 5945 8 1774 317 293 73 22 chrX 155872330 155872344 -10777952 + ID_B1 SINE B4 69 211 -13 8 1774 545 211 80 0 chrX 155872344 155872466 -10777830 + B1_Mur1 SINE Alu 3 136 -13 8 1774 360 0 0 0 chrX 155872470 155872510 -10777786 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 1774 216 0 0 0 chrX 155872724 155872748 -10777548 + (TGAG)n Simple_repeat Simple_repeat 4 27 0 8 1774 259 299 70 133 chrX 155872769 155872927 -10777369 + B1_Mur3 SINE Alu 2 149 0 8 1774 526 252 67 0 chrX 155872809 155872928 -10777368 + ID_B1 SINE B4 98 224 0 8 1774 24 77 0 0 chrX 155872930 155872982 -10777314 + AT_rich Low_complexity Low_complexity 1 52 0 8 1774 226 200 22 0 chrX 155873115 155873160 -10777136 - B4 SINE B4 -245 47 2 8 1774 957 266 89 0 chrX 155873675 155873934 -10776362 - B4A SINE B4 -10 282 1 8 1774 22 35 0 0 chrX 155874582 155874611 -10775685 + AT_rich Low_complexity Low_complexity 1 29 0 8 1774 1527 52 0 0 chrX 155874663 155874837 -10775459 + B2_Mm1t SINE B2 1 174 -19 8 1774 7489 33 2 2 chrX 155874852 155875733 -10774563 - L1Md_F2 LINE L1 0 6582 5702 8 1774 317 319 60 112 chrX 155876031 155876288 -10774008 - B4 SINE B4 -16 276 68 8 1774 367 240 50 50 chrX 155876284 155876385 -10773911 + ID_B1 SINE B4 96 196 -28 8 1774 723 198 0 0 chrX 155876527 155876638 -10773658 - PB1D9 SINE Alu -7 113 3 8 1774 297 0 0 0 chrX 155876641 155876674 -10773622 + (TTA)n Simple_repeat Simple_repeat 3 35 0 8 1774 638 242 0 83 chrX 155876831 155876956 -10773340 - MTC LTR MaLR -256 165 48 8 1774 1216 75 0 0 chrX 155876956 155877103 -10773193 - B1_Mus2 SINE Alu 0 147 1 8 1774 638 242 0 83 chrX 155877103 155877157 -10773139 - MTC LTR MaLR -374 47 2 8 1774 191 289 0 0 chrX 155877157 155877202 -10773094 - MER5B DNA MER1_type -133 45 1 8 1774 449 233 0 104 chrX 155877458 155877592 -10772704 + PB1D7 SINE Alu 1 120 0 8 1774 448 252 238 40 chrX 155878041 155878268 -10772028 - L1MD1 LINE L1 -8 6234 5963 8 1774 196 100 0 48 chrX 155878739 155878781 -10771515 + (GGGAGA)n Simple_repeat Simple_repeat 5 44 0 8 1774 1725 175 90 49 chrX 155878806 155879172 -10771124 - ORR1C2 LTR MaLR 0 384 4 8 1774 237 65 0 0 chrX 155879421 155879452 -10770844 + (CTTTG)n Simple_repeat Simple_repeat 2 32 0 8 1774 351 277 38 46 chrX 155879800 155879923 -10770373 + MIR SINE MIR 27 149 -119 8 1774 312 91 0 0 chrX 155879978 155880022 -10770274 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 1774 402 276 130 28 chrX 155880031 155880139 -10770157 - ID_B1 SINE B4 -24 200 82 8 1774 211 28 27 27 chrX 155882227 155882264 -10768032 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 8 1774 1190 58 0 0 chrX 155882264 155882401 -10767895 - B1_Mus1 SINE Alu -10 138 2 8 1774 393 77 0 0 chrX 155882428 155882480 -10767816 - L1_Mus3 LINE L1 -386 6252 6201 8 1774 2680 61 94 3 chrX 155882480 155882842 -10767454 + L1_Mus3 LINE L1 6242 6636 -2 8 1774 857 230 39 0 chrX 155882877 155883055 -10767241 + B3 SINE B2 27 211 -5 8 1774 260 270 183 38 chrX 155883082 155883213 -10767083 + MER105 DNA DNA 35 184 -20 8 1774 199 303 181 47 chrX 155883593 155883742 -10766554 - MIR SINE MIR -29 233 65 8 1774 5046 236 160 34 chrX 155884889 155885877 -10764419 - Lx6 LINE L1 -172 7288 6174 8 1774 378 0 0 0 chrX 155885877 155885919 -10764377 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 1774 5046 236 160 34 chrX 155885919 155886193 -10764103 - Lx6 LINE L1 -1287 6173 5828 8 1774 976 119 154 6 chrX 155886193 155886362 -10763934 - B2_Mm2 SINE B2 -1 194 1 8 1774 5046 236 160 34 chrX 155886362 155886484 -10763812 - Lx6 LINE L1 -1633 5827 5712 8 1774 1796 161 55 52 chrX 155886484 155886812 -10763484 + ORR1A4 LTR MaLR 1 329 0 8 1774 10106 163 32 48 chrX 155886812 155887208 -10763088 - Lx6 LINE L1 -1749 5711 5305 8 1774 719 44 0 0 chrX 155887208 155887298 -10762998 + 5S rRNA rRNA 1 90 -31 8 1774 10106 163 32 48 chrX 155887298 155888408 -10761888 - Lx6 LINE L1 -1749 5304 4162 8 1774 1118 53 0 0 chrX 155888408 155888541 -10761755 + B1_Mus2 SINE Alu 2 134 -13 8 1774 287 25 0 24 chrX 155888541 155888582 -10761714 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 8 1774 10106 151 29 46 chrX 155888582 155889691 -10760605 - Lx6 LINE L1 -1718 4162 3128 8 1774 1070 201 39 4 chrX 155889709 155889939 -10760357 - Lx6 LINE L1 -7435 293 56 8 1774 411 255 0 73 chrX 155890130 155890240 -10760056 + ID_B1 SINE B4 123 224 0 8 1774 348 361 22 8 chrX 155890284 155890418 -10759878 + B1F SINE Alu 5 140 -9 8 1774 245 373 0 0 chrX 155890437 155890504 -10759792 + ID4_ SINE ID 3 69 -14 8 1774 998 55 8 0 chrX 155891418 155891546 -10758750 - B1_Mus2 SINE Alu 0 147 19 8 1774 216 262 18 18 chrX 155892407 155892516 -10757780 + CT-rich Low_complexity Low_complexity 2 110 0 8 1774 189 0 0 0 chrX 155892568 155892589 -10757707 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 8 1774 363 169 0 0 chrX 155892647 155892718 -10757578 + (TA)n Simple_repeat Simple_repeat 1 71 0 8 1774 213 39 0 0 chrX 155892824 155892850 -10757446 + (TATG)n Simple_repeat Simple_repeat 2 27 0 8 1774 373 218 115 105 chrX 155892940 155893088 -10757208 - L1MA4 LINE L1 -338 5953 5791 8 1774 1016 222 19 0 chrX 155893088 155893300 -10756996 + B3 SINE B2 1 216 0 8 1774 373 208 112 118 chrX 155893300 155893340 -10756956 - L1MA4 LINE L1 -502 5798 5769 8 1774 657 217 89 25 chrX 155893432 155893582 -10756714 - B3A SINE B2 -37 179 24 8 1774 1260 81 41 51 chrX 155893582 155893777 -10756519 + B2_Mm2 SINE B2 2 194 -1 8 1774 657 204 90 15 chrX 155893777 155893796 -10756500 - B3A SINE B2 -175 23 5 8 1774 1290 293 21 64 chrX 155893844 155894387 -10755909 - L1_Rod LINE L1 -134 5713 5209 8 1774 1145 48 0 39 chrX 155894387 155894540 -10755756 - B1_Mm SINE Alu 0 147 1 8 1774 1290 293 21 64 chrX 155894540 155894889 -10755407 - L1_Rod LINE L1 -639 5208 4859 8 1774 232 188 231 15 chrX 155895243 155895308 -10754988 + MER5A DNA MER1_type 1 79 -110 8 1774 219 313 0 15 chrX 155895321 155895389 -10754907 + BC1_Mm scRNA scRNA 28 94 -58 8 1774 192 125 0 111 chrX 155895439 155895475 -10754821 + MER5A DNA MER1_type 158 189 0 8 1774 213 291 16 10 chrX 155895564 155895675 -10754621 - MIR SINE MIR -77 191 79 8 1774 935 39 105 30 chrX 155900437 155900570 -10749726 + B1_Mus2 SINE Alu 1 143 -4 8 1774 190 152 0 33 chrX 155901490 155901551 -10748745 + T-rich Low_complexity Low_complexity 1 59 0 8 1774 25 31 0 0 chrX 155901826 155901858 -10748438 + AT_rich Low_complexity Low_complexity 1 32 0 8 1774 620 224 7 7 chrX 155901858 155902006 -10748290 - Lx6 LINE L1 -9 7451 7304 9 1774 481 226 46 19 chrX 155902164 155902272 -10748024 - PB1D10 SINE Alu -1 116 6 9 1774 1161 64 0 0 chrX 155902726 155902867 -10747429 - B1_Mm SINE Alu -6 141 1 9 1774 460 312 0 9 chrX 155903213 155903323 -10746973 + PB1D10 SINE Alu 1 109 -8 9 1774 272 247 26 13 chrX 155903336 155903414 -10746882 + MIRb SINE MIR 176 254 -14 9 1774 250 228 188 12 chrX 155903421 155903501 -10746795 + MER5A1 DNA MER1_type 1 94 -72 9 1774 542 270 8 17 chrX 155903716 155903833 -10746463 - ID_B1 SINE B4 -14 210 95 9 1774 331 286 59 12 chrX 155903757 155903842 -10746454 - PB1D10 SINE Alu -28 89 1 9 1774 1037 247 150 4 chrX 155903875 155904343 -10745953 + L1MB8 LINE L1 5626 6161 -17 9 1774 905 343 98 37 chrX 155904423 155904712 -10745584 - MER68 LTR ERVL -52 511 208 9 1774 1150 75 7 0 chrX 155904712 155904858 -10745438 + B1_Mus1 SINE Alu 1 147 -1 9 1774 905 343 98 37 chrX 155904858 155905050 -10745246 - MER68 LTR ERVL -356 207 1 9 1774 268 329 0 0 chrX 155905080 155905162 -10745134 - MER68-int LTR ERVL -46 2944 2863 9 1774 1280 27 0 0 chrX 155905175 155905322 -10744974 + B1_Mm SINE Alu 1 147 0 9 1774 642 302 62 45 chrX 155905424 155905778 -10744518 - MER68-int LTR ERVL -244 2746 2387 9 1774 485 306 106 67 chrX 155905938 155906295 -10744001 - MER68-int LTR ERVL -702 2288 1918 9 1774 301 232 14 14 chrX 155906303 155906373 -10743923 - MER68-int LTR ERVL -1200 1790 1721 9 1774 632 308 70 30 chrX 155906779 155907110 -10743186 - MER68-int LTR ERVL -2645 345 2 9 1774 661 307 107 24 chrX 155907111 155907572 -10742724 - MER68 LTR ERVL 0 563 17 9 1774 258 298 35 12 chrX 155907580 155907665 -10742631 - MIRc SINE MIR -132 136 50 9 1774 1012 40 71 0 chrX 155908482 155908608 -10741688 + B1_Mus1 SINE Alu 2 136 -12 9 1774 922 101 13 7 chrX 155908609 155908758 -10741538 + (GGAA)n Simple_repeat Simple_repeat 2 151 0 9 1774 366 23 0 0 chrX 155908758 155908801 -10741495 + (GA)n Simple_repeat Simple_repeat 1 43 0 9 1774 578 286 111 109 chrX 155908824 155908885 -10741411 - MLT1F LTR MaLR -7 541 486 9 1774 932 75 113 0 chrX 155908885 155909018 -10741278 + B1_Mus1 SINE Alu 1 148 0 9 1774 578 286 111 109 chrX 155909018 155909333 -10740963 - MLT1F LTR MaLR -63 485 164 9 1774 387 0 0 0 chrX 155909344 155909387 -10740909 + (TA)n Simple_repeat Simple_repeat 1 43 0 9 1774 26 0 0 0 chrX 155909468 155909494 -10740802 + AT_rich Low_complexity Low_complexity 1 26 0 9 1774 446 160 0 28 chrX 155909967 155910033 -10740263 - Lx9 LINE L1 -56 7588 7525 9 1774 1131 82 0 0 chrX 155910033 155910180 -10740116 - B1_Mm SINE Alu 0 147 1 9 1774 446 160 0 28 chrX 155910180 155910222 -10740074 - Lx9 LINE L1 -120 7524 7483 9 1774 961 180 24 0 chrX 155910276 155910443 -10739853 + Lx9 LINE L1 6416 6586 -1058 9 1774 289 297 94 47 chrX 155911282 155911388 -10738908 - PB1D10 SINE Alu 0 117 7 9 1774 412 272 147 31 chrX 155911543 155911672 -10738624 + RSINE1 SINE B4 3 146 -19 9 1774 1415 121 254 7 chrX 155911990 155912265 -10738031 - ORR1B1 LTR MaLR -51 343 1 9 1774 1045 180 108 5 chrX 155912265 155912477 -10737819 - RMER1B Other Other -714 352 119 9 1774 4298 127 29 12 chrX 155912507 155913227 -10737069 - Lx4B LINE L1 -55 7003 6272 9 1774 1418 83 5 0 chrX 155913485 155913677 -10736619 + B2_Mm1a SINE B2 1 193 0 9 1774 245 231 0 122 chrX 155913817 155913871 -10736425 + B1F SINE Alu 31 80 -69 9 1774 901 85 132 0 chrX 155913871 155914000 -10736296 + B1_Mus2 SINE Alu 1 146 -1 9 1774 261 57 0 0 chrX 155914000 155914035 -10736261 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 9 1774 245 308 100 55 chrX 155914035 155914097 -10736199 + B1F SINE Alu 81 148 -1 9 1774 334 314 99 39 chrX 155914251 155914606 -10735690 + L1ME3B LINE L1 5829 6204 -36 9 1774 933 217 65 10 chrX 155914698 155914898 -10735398 - B3 SINE B2 -4 212 2 9 1774 864 285 182 4 chrX 155914898 155915162 -10735134 + MTEa LTR MaLR 63 373 -6 9 1774 619 180 0 0 chrX 155915717 155915817 -10734479 + MTEa LTR MaLR 1 100 -279 9 1774 7435 88 13 0 chrX 155915929 155917277 -10733019 - Lx LINE L1 -3 6651 5288 9 1774 7546 83 1 4 chrX 155917314 155918943 -10731353 - L1_Mus2 LINE L1 -1 6565 4941 9 1774 515 222 108 14 chrX 155918943 155919158 -10731138 - ORR1A4 LTR MaLR -114 215 3 9 1774 243 326 14 75 chrX 155919265 155919411 -10730885 - MLT1A1 LTR MaLR 0 408 272 9 1774 377 308 45 58 chrX 155919551 155919706 -10730590 + RSINE1 SINE B4 3 155 -10 9 1774 888 76 111 61 chrX 155922300 155922481 -10727815 - B2_Mm2 SINE B2 -4 191 2 9 1774 1207 41 0 0 chrX 155923773 155923920 -10726376 - B1_Mm SINE Alu 0 147 1 9 1774 1186 49 0 0 chrX 155924698 155924841 -10725455 + B1_Mm SINE Alu 2 144 -3 9 1774 210 37 0 0 chrX 155924841 155924868 -10725428 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1774 213 39 0 0 chrX 155925142 155925168 -10725128 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 9 1774 190 204 45 0 chrX 155925318 155925362 -10724934 - L2 LINE L2 -2101 1318 1273 9 1774 3710 82 0 4 chrX 155925983 155926483 -10723813 - L1Md_F2 LINE L1 0 6582 6085 9 1774 1213 55 0 0 chrX 155926486 155926631 -10723665 - B1_Mm SINE Alu 0 147 3 9 1774 270 0 0 0 chrX 155926715 155926745 -10723551 + (T)n Simple_repeat Simple_repeat 1 30 0 9 1774 233 291 0 0 chrX 155926956 155927042 -10723254 + CT-rich Low_complexity Low_complexity 2 87 0 9 1774 390 21 0 0 chrX 155927064 155927111 -10723185 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 1774 289 207 7 117 chrX 155927277 155927414 -10722882 + A-rich Low_complexity Low_complexity 5 126 0 9 1774 388 334 158 24 chrX 155927616 155927872 -10722424 - LTR16C LTR ERVL -1 537 230 9 1774 1345 157 102 164 chrX 155927872 155928292 -10722004 - ORR1B1 LTR MaLR 0 394 1 9 1774 385 348 124 38 chrX 155928292 155928325 -10721971 - LTR16C LTR ERVL -285 253 223 9 1774 257 284 12 58 chrX 155928853 155928939 -10721357 + ID4_ SINE ID 2 83 0 9 1774 321 47 0 0 chrX 155929020 155929063 -10721233 + (GA)n Simple_repeat Simple_repeat 2 44 0 9 1774 312 267 97 88 chrX 155929080 155929306 -10720990 - L1MEe LINE L1 -3805 1049 822 9 1774 24 53 0 0 chrX 155930160 155930198 -10720098 + AT_rich Low_complexity Low_complexity 1 38 0 9 1774 1612 36 5 0 chrX 155931418 155931610 -10718686 + B2_Mm1t SINE B2 1 193 0 9 1774 216 0 0 0 chrX 155931610 155931634 -10718662 + (A)n Simple_repeat Simple_repeat 1 24 0 9 1774 1322 92 33 0 chrX 155931660 155931844 -10718452 + B2_Mm2 SINE B2 1 190 -5 9 1774 227 310 34 22 chrX 155931845 155931934 -10718362 - LTR16C LTR ERVL -350 106 17 9 1774 407 302 9 0 chrX 155931984 155932090 -10718206 + PB1D10 SINE Alu 3 109 -8 9 1774 447 200 38 0 chrX 155932805 155932885 -10717411 - ID_B1 SINE B4 -7 217 135 9 1774 251 253 31 103 chrX 155932885 155932898 -10717398 - PB1D9 SINE Alu -3 113 28 9 1774 219 224 34 34 chrX 155933510 155933598 -10716698 - MIRc SINE MIR -118 150 63 9 1774 288 197 91 13 chrX 155934650 155934727 -10715569 - B4 SINE B4 -208 84 2 9 1774 1197 68 0 0 chrX 155934853 155935000 -10715296 + B1_Mus2 SINE Alu 1 147 0 9 1774 332 167 17 0 chrX 155935196 155935256 -10715040 - ID_B1 SINE B4 -6 218 158 9 1774 672 299 38 68 chrX 155937325 155937695 -10712601 - RMER15 LTR ERVL -92 483 4 9 1774 861 141 106 50 chrX 155937877 155938056 -10712240 + B2_Mm2 SINE B2 2 190 -5 9 1774 1172 44 0 0 chrX 155938205 155938341 -10711955 - B1_Mus1 SINE Alu -10 138 3 9 1774 1178 96 0 0 chrX 155938392 155938548 -10711748 + B2_Mm2 SINE B2 1 156 -39 9 1774 1096 89 7 0 chrX 155938707 155938853 -10711443 + B1_Mm SINE Alu 1 147 0 9 1774 582 38 12 0 chrX 155939013 155939093 -10711203 + L1Md_T LINE L1 6500 6580 -2 9 1774 921 246 70 18 chrX 155939100 155939328 -10710968 - 7SK RNA RNA -91 240 1 9 1774 311 139 8 82 chrX 155939464 155939533 -10710763 - B2_Mm2 SINE B2 -102 114 47 9 1774 1091 141 11 0 chrX 155939546 155939723 -10710573 - B2_Mm1t SINE B2 -14 179 1 9 1774 1201 91 57 0 chrX 155939726 155939901 -10710395 - B2_Mm2 SINE B2 -10 185 1 9 1774 360 0 0 0 chrX 155940513 155940553 -10709743 + (CA)n Simple_repeat Simple_repeat 2 41 0 9 1774 552 233 13 46 chrX 155940772 155940925 -10709371 + B1_Mur2 SINE Alu 1 148 -1 9 1774 2710 168 43 16 chrX 155940932 155941441 -10708855 + Lx5 LINE L1 6528 7050 0 9 1774 255 280 13 51 chrX 155941528 155941607 -10708689 + ID4_ SINE ID 5 80 -3 9 1774 213 159 0 0 chrX 155941720 155941764 -10708532 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 9 1774 1268 132 5 0 chrX 155941798 155941995 -10708301 - Lx4A LINE L1 0 7058 6861 9 1774 1999 96 24 21 chrX 155941995 155942165 -10708131 - Lx4A LINE L1 -289 6769 6594 9 1774 1446 59 5 16 chrX 155942165 155942354 -10707942 + B2_Mm1a SINE B2 2 188 -5 9 1774 1999 96 24 21 chrX 155942354 155942513 -10707783 - Lx4A LINE L1 -465 6593 6439 9 1774 297 298 0 37 chrX 155943141 155943249 -10707047 + RLTR4_MM-int LTR ERV1 7109 7212 -389 9 1774 2498 73 0 0 chrX 155943988 155944317 -10705979 - Lx4A LINE L1 -937 6121 5793 9 1774 399 174 14 0 chrX 155944369 155944438 -10705858 - B3 SINE B2 -120 96 27 9 1774 305 81 306 0 chrX 155944449 155944511 -10705785 - Lx LINE L1 -1 6653 6573 9 1774 1149 75 0 7 chrX 155944747 155944895 -10705401 + B1_Mus2 SINE Alu 1 147 0 9 1774 804 233 20 45 chrX 155944983 155945185 -10705111 - B3A SINE B2 -1 197 1 9 1774 1472 44 16 21 chrX 155945288 155945475 -10704821 - B2_Mm2 SINE B2 -9 186 1 9 1774 219 36 0 0 chrX 155945553 155945581 -10704715 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 9 1774 832 260 19 78 chrX 155945689 155945960 -10704336 + B4 SINE B4 13 267 -25 9 1774 590 118 10 0 chrX 155945964 155946066 -10704230 + (CA)n Simple_repeat Simple_repeat 2 104 0 9 1774 1993 152 98 5 chrX 155946066 155946444 -10703852 + RMER13B LTR ERVK 5 417 -491 9 1774 1507 161 42 34 chrX 155946441 155946795 -10703501 + RMER13B LTR ERVK 549 905 -3 9 1774 243 0 0 0 chrX 155946795 155946822 -10703474 + (CA)n Simple_repeat Simple_repeat 2 28 0 9 1774 234 0 0 0 chrX 155946822 155946847 -10703449 + (GA)n Simple_repeat Simple_repeat 2 27 0 9 1774 222 313 60 10 chrX 155946869 155946969 -10703327 + PB1D10 SINE Alu 12 116 -1 9 1774 196 73 0 89 chrX 155947484 155947529 -10702767 + (TATG)n Simple_repeat Simple_repeat 3 43 0 1 1774 1103 75 7 0 chrX 155947555 155947702 -10702594 - B1_Mus1 SINE Alu 0 148 1 1 1774 1671 27 0 0 chrX 155947711 155947898 -10702398 - B2_Mm1t SINE B2 -5 188 2 1 1774 225 0 0 0 chrX 155947966 155947991 -10702305 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1774 1508 120 271 13 chrX 155948138 155948518 -10701778 + RLTR47_MM LTR ERV1 55 532 0 1 1774 1573 321 68 77 chrX 155948993 155950994 -10699302 + MuRRS4-int LTR ERV1 514 2574 -5204 1 1774 1997 291 69 69 chrX 155951008 155952631 -10697665 + MuRRS4-int LTR ERV1 2744 5630 -1971 1 1774 479 330 45 19 chrX 155952955 155953221 -10697075 + RLTR6-int LTR ERV1 7455 7727 -51 1 1774 1325 83 6 11 chrX 155953300 155953458 -10696838 + B2_Mm1a SINE B2 1 158 -35 1 1774 279 0 0 0 chrX 155953458 155953489 -10696807 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1 1774 1325 83 6 11 chrX 155953489 155953512 -10696784 + B2_Mm1a SINE B2 159 181 -12 1 1774 1726 127 172 157 chrX 155953588 155953874 -10696422 + RLTR47_MM LTR ERV1 1 355 -177 1 1774 1195 48 0 14 chrX 155953874 155954022 -10696274 + B1_Mm SINE Alu 2 147 0 1 1774 1726 127 172 157 chrX 155954022 155954259 -10696037 + RLTR47_MM LTR ERV1 356 532 0 1 1774 484 281 19 19 chrX 155954288 155954444 -10695852 + RMER15 LTR ERVL 264 419 -156 1 1774 236 208 36 36 chrX 155954564 155954619 -10695677 + PB1D9 SINE Alu 5 59 -61 1 1774 917 125 0 74 chrX 155954619 155954809 -10695487 + (CAGAGA)n Simple_repeat Simple_repeat 5 180 0 1 1774 278 139 127 0 chrX 155954814 155954972 -10695324 + (CAGG)n Simple_repeat Simple_repeat 2 179 0 1 1774 284 159 0 0 chrX 155954978 155955022 -10695274 + (CAGAGA)n Simple_repeat Simple_repeat 2 45 0 1 1774 192 151 113 0 chrX 155955022 155955128 -10695168 + (CAGG)n Simple_repeat Simple_repeat 2 119 0 1 1774 492 125 0 77 chrX 155955128 155955232 -10695064 + (CAGAGA)n Simple_repeat Simple_repeat 4 99 0 1 1774 4083 184 69 36 chrX 155955241 155956091 -10694205 + RLTR25B LTR ERVK 1 895 -133 1 1774 540 0 0 0 chrX 155956091 155956151 -10694145 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 1774 441 0 0 0 chrX 155956151 155956199 -10694097 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 1774 4083 184 69 36 chrX 155956199 155956342 -10693954 + RLTR25B LTR ERVK 896 1027 -1 1 1774 1231 34 0 0 chrX 155956768 155956915 -10693381 + B1_Mus2 SINE Alu 1 147 0 1 1774 252 279 0 0 chrX 155958174 155958242 -10692054 + MMTV-int LTR ERVK 1853 1920 -5333 1 1774 415 298 72 69 chrX 155958277 155959014 -10691282 + IAP-d-int LTR ERVK 1644 2699 -4554 1 1774 3523 58 20 6 chrX 155960109 155960598 -10689698 - LTRIS2 LTR ERV1 0 564 69 1 1774 262 311 9 0 chrX 155960963 155961069 -10689227 + IAP-d-int LTR ERVK 6583 6689 -564 1 1774 1592 27 5 5 chrX 155961114 155961299 -10688997 + B2_Mm1a SINE B2 1 185 -8 1 1774 980 156 0 6 chrX 155961663 155961844 -10688452 + CT-rich Low_complexity Low_complexity 1 180 0 1 1774 1734 133 40 119 chrX 155962042 155962486 -10687810 - RMER17C LTR ERVK -1 409 1 1 1774 4040 247 115 113 chrX 155962486 155962810 -10687486 - RMER17C-int LTR ERVK 0 3238 2900 1 1774 261 0 0 0 chrX 155962810 155962839 -10687457 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1774 4130 148 203 90 chrX 155962839 155964064 -10686232 - RMER17C-int LTR ERVK -339 2899 1413 1 1774 243 88 0 0 chrX 155964064 155964098 -10686198 + (CAG)n Simple_repeat Simple_repeat 2 35 0 1 1774 4130 242 119 112 chrX 155964098 155965769 -10684527 - RMER17C-int LTR ERVK -1570 1668 13 1 1774 1447 166 111 11 chrX 155965777 155966148 -10684148 - RMER17C LTR ERVK 0 410 3 1 1774 3607 160 74 36 chrX 155966148 155966435 -10683861 + RLTR25B LTR ERVK 21 322 -706 1 1774 207 0 0 0 chrX 155966435 155966458 -10683838 + (GA)n Simple_repeat Simple_repeat 2 24 0 1 1774 3607 180 75 63 chrX 155966458 155967179 -10683117 + RLTR25B LTR ERVK 323 964 -139 1 1774 534 67 0 0 chrX 155967179 155967254 -10683042 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 1774 360 0 0 0 chrX 155967254 155967293 -10683003 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 1774 2418 229 77 130 chrX 155967293 155967428 -10682868 + RLTR25B LTR ERVK 965 1101 -2 1 1774 440 217 0 0 chrX 155967428 155967516 -10682780 + B1_Mus2 SINE Alu 58 145 -2 1 1774 310 283 24 96 chrX 155967716 155967757 -10682539 + PB1D10 SINE Alu 2 117 0 1 1774 404 207 0 24 chrX 155967757 155967841 -10682455 + ID_B1 SINE B4 143 224 0 1 1774 1072 94 6 0 chrX 155968475 155968634 -10681662 + B2_Mm1t SINE B2 1 160 -33 1 1774 207 0 0 0 chrX 155968634 155968657 -10681639 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 1 1774 216 0 0 0 chrX 155968661 155968685 -10681611 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1774 249 262 138 0 chrX 155968706 155968786 -10681510 + MER5A DNA MER1_type 96 186 -3 1 1774 481 250 17 103 chrX 155968863 155969037 -10681259 + MTEa LTR MaLR 20 178 -201 1 1774 325 319 53 42 chrX 155969130 155969320 -10680976 + MT2A LTR ERVL 270 461 -72 1 1774 1348 226 3 17 chrX 155969459 155969747 -10680549 + B4 SINE B4 5 288 -4 1 1774 231 253 48 0 chrX 155969789 155969872 -10680424 + GA-rich Low_complexity Low_complexity 2 88 0 1 1774 1210 34 0 20 chrX 155970063 155970213 -10680083 + B1_Mm SINE Alu 1 147 0 1 1774 210 37 0 0 chrX 155970216 155970243 -10680053 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1774 195 218 0 0 chrX 155970687 155970742 -10679554 + (CGG)n Simple_repeat Simple_repeat 3 57 0 1 1774 252 77 0 0 chrX 155971394 155971433 -10678863 + (T)n Simple_repeat Simple_repeat 1 39 0 1 1774 240 288 115 39 chrX 155971612 155971742 -10678554 - B1_Mur2 SINE Alu -8 141 2 1 1774 410 322 27 27 chrX 155971833 155971980 -10678316 - ID_B1 SINE B4 0 224 78 1 1774 209 287 43 65 chrX 155972110 155972203 -10678093 + MIRc SINE MIR 92 185 -83 1 1774 1119 48 0 46 chrX 155972293 155972446 -10677850 - B1_Mus2 SINE Alu 0 147 2 1 1774 755 294 32 32 chrX 155972491 155972737 -10677559 + B4A SINE B4 1 246 -46 1 1774 393 22 0 0 chrX 155972760 155972806 -10677490 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1774 248 247 38 38 chrX 155972851 155972931 -10677365 + ID4 SINE ID 1 80 -3 1 1774 669 121 0 0 chrX 155973224 155973323 -10676973 - B1_Mus2 SINE Alu -2 145 47 1 1774 628 188 65 36 chrX 155973340 155973478 -10676818 + B1_Mur2 SINE Alu 6 147 -2 1 1774 216 0 0 0 chrX 155973483 155973507 -10676789 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1774 319 278 34 92 chrX 155973637 155973756 -10676540 - PB1D10 SINE Alu 0 117 6 1 1774 1585 62 0 0 chrX 155973764 155973957 -10676339 - B2_Mm1t SINE B2 0 193 1 1 1774 723 286 46 41 chrX 155973983 155974120 -10676176 - ID_B1 SINE B4 -2 222 83 1 1774 1326 147 36 9 chrX 155974120 155974339 -10675957 - URR1B DNA MER1_type 0 225 1 1 1774 723 286 46 41 chrX 155974339 155974420 -10675876 - ID SINE ID -142 82 3 1 1774 22 35 0 0 chrX 155974431 155974460 -10675836 + AT_rich Low_complexity Low_complexity 1 29 0 1 1774 180 0 0 0 chrX 155974468 155974488 -10675808 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1 1774 1098 15 14 28 chrX 155974488 155974629 -10675667 - B1_Mur4 SINE Alu -9 141 3 1 1774 353 338 52 7 chrX 155974809 155974964 -10675332 - RSINE1 SINE B4 0 165 4 1 1774 256 322 81 16 chrX 155975013 155975136 -10675160 - B4A SINE B4 -161 131 1 1 1774 449 279 53 15 chrX 155975223 155975354 -10674942 - B1F SINE Alu -13 136 1 1 1774 24 32 0 0 chrX 155975368 155975399 -10674897 + AT_rich Low_complexity Low_complexity 1 31 0 1 1774 780 243 23 59 chrX 155975409 155975628 -10674668 + B3 SINE B2 2 212 -4 1 221 297 75 0 0 chrX 155975672 155975712 -10674584 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 1775 384 218 0 13 chrX 155975773 155975852 -10674444 - B4 SINE B4 -212 80 3 1 1775 320 265 10 10 chrX 155976219 155976322 -10673974 - L1MB7 LINE L1 -45 6139 6037 1 1775 287 183 144 56 chrX 155976328 155976473 -10673823 + B1_Mur4 SINE Alu 2 150 0 1 1775 483 89 38 0 chrX 155976960 155977039 -10673257 - L1Md_F2 LINE L1 0 6582 6501 1 1775 421 240 143 0 chrX 155977355 155977530 -10672766 - L1MC4 LINE L1 -956 5258 5059 1 1775 247 183 62 77 chrX 155977580 155977710 -10672586 - L1MC4 LINE L1 -4599 1616 1489 1 1775 643 122 197 0 chrX 155977683 155977830 -10672466 - Lx9 LINE L1 -24 7620 7445 1 1775 310 239 14 14 chrX 155978243 155978315 -10671981 - MER58C DNA MER1_type -8 207 136 1 1775 265 338 27 0 chrX 155978357 155978431 -10671865 + MER5A DNA MER1_type 110 185 -4 1 1775 306 274 176 14 chrX 155978456 155978678 -10671618 - L1M5 LINE L1 -605 5635 5378 1 1775 545 149 228 0 chrX 155979038 155979152 -10671144 - B1_Mur3 SINE Alu -6 143 4 1 1775 434 199 296 37 chrX 155979251 155979413 -10670883 - B3 SINE B2 -1 215 12 1 1775 249 211 0 0 chrX 155979441 155979498 -10670798 + (CTG)n Simple_repeat Simple_repeat 3 59 0 1 1775 213 94 0 0 chrX 155979796 155979828 -10670468 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 1775 1086 54 7 33 chrX 155980297 155980449 -10669847 + B1_Mus1 SINE Alu 1 148 0 1 1775 201 167 0 0 chrX 155980504 155980540 -10669756 + T-rich Low_complexity Low_complexity 3 38 0 1 1775 243 215 61 15 chrX 155980545 155980611 -10669685 - B1_Mur1 SINE Alu -6 143 75 1 1775 970 102 51 0 chrX 155980612 155980749 -10669547 + B1_Mus1 SINE Alu 5 148 0 1 1775 282 123 0 0 chrX 155980749 155980806 -10669490 + (A)n Simple_repeat Simple_repeat 1 57 0 1 1775 307 197 45 0 chrX 155980819 155980885 -10669411 - B1_Mus2 SINE Alu -61 86 18 1 1775 428 260 0 46 chrX 155980920 155981029 -10669267 - B1_Mur1 SINE Alu -31 118 15 1 1775 913 149 28 11 chrX 155981144 155981320 -10668976 + URR1A DNA MER1_type 48 226 0 1 1775 258 375 0 0 chrX 155981391 155981463 -10668833 + B4 SINE B4 219 290 -2 1 1775 972 161 42 21 chrX 155981520 155981710 -10668586 - B2_Mm2 SINE B2 -1 194 1 1 1775 279 21 20 40 chrX 155981719 155981769 -10668527 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1 1775 559 29 0 0 chrX 155981769 155981839 -10668457 - B1_Mus2 SINE Alu -11 136 67 1 1775 3404 71 2 0 chrX 155981916 155982355 -10667941 - L1_Mus1 LINE L1 -3 6564 6125 1 1775 1120 95 0 0 chrX 155982388 155982536 -10667760 - B1_Mus1 SINE Alu 0 148 1 1 1775 893 220 30 10 chrX 155982571 155982773 -10667523 - B3 SINE B2 -10 206 1 1 1775 622 197 79 0 chrX 155983407 155983534 -10666762 - B1_Mus2 SINE Alu -7 140 4 1 1775 202 260 20 0 chrX 155983567 155983617 -10666679 + (TATATG)n Simple_repeat Simple_repeat 6 56 0 1 1775 641 292 53 27 chrX 155983637 155983862 -10666434 - B4A SINE B4 -61 231 1 1 1775 290 276 252 0 chrX 155983862 155983964 -10666332 - B4 SINE B4 -61 231 98 1 1775 508 306 93 42 chrX 155985314 155985573 -10664723 + B4A SINE B4 15 286 -6 1 1775 304 0 0 0 chrX 155987155 155987198 -10663098 - L1Md_T LINE L1 -1 6581 6539 1 1775 297 264 12 116 chrX 155987390 155987606 -10662690 - LTR40c LTR ERVL -168 294 105 1 1775 872 44 0 0 chrX 155988128 155988242 -10662054 - B1_Mus2 SINE Alu 0 147 34 1 1775 488 244 72 29 chrX 155988372 155988511 -10661785 - B1_Mus1 SINE Alu 0 148 4 1 1775 312 370 0 30 chrX 155988794 155988925 -10661371 + B1F2 SINE Alu 6 132 -17 1 1775 287 319 0 112 chrX 155988925 155988946 -10661350 + ID_B1 SINE B4 87 221 -3 1 1775 24 0 0 0 chrX 155989170 155989194 -10661102 + AT_rich Low_complexity Low_complexity 1 24 0 1 1775 836 106 8 8 chrX 155990475 155990608 -10659688 - B1_Mus2 SINE Alu -2 145 13 1 1775 1213 28 14 14 chrX 155990971 155991118 -10659178 - B1_Mm SINE Alu 0 147 1 1 1775 881 122 64 14 chrX 155992172 155992313 -10657983 - B1_Mur2 SINE Alu 0 149 2 1 1775 296 319 78 98 chrX 155992600 155992753 -10657543 - RSINE1 SINE B4 -13 152 3 1 1775 1527 48 0 11 chrX 155992821 155993011 -10657285 - B2_Mm2 SINE B2 -6 189 2 1 1775 25 51 0 0 chrX 155993366 155993405 -10656891 + AT_rich Low_complexity Low_complexity 1 39 0 1 1775 864 187 0 32 chrX 155994196 155994351 -10655945 - B1_Mur4 SINE Alu 0 150 1 1 1775 627 200 230 0 chrX 155994379 155994544 -10655752 + B3 SINE B2 2 204 -12 1 1775 246 294 0 14 chrX 155994609 155994678 -10655618 + ID4 SINE ID 1 68 -15 1 1775 557 177 144 8 chrX 155995999 155996124 -10654172 + B1_Mus2 SINE Alu 6 147 0 1 1775 23 33 0 0 chrX 155996959 155996989 -10653307 + AT_rich Low_complexity Low_complexity 1 30 0 1 1775 630 226 13 33 chrX 155997461 155997612 -10652684 + B1_Mur4 SINE Alu 3 150 0 1 1775 340 177 289 0 chrX 155998293 155998387 -10651909 + PB1D9 SINE Alu 6 113 -7 1 1775 316 261 185 27 chrX 155999220 155999366 -10650930 + MIR SINE MIR 21 189 -73 1 1775 1924 206 103 19 chrX 155999463 155999998 -10650298 - L1MB7 LINE L1 -37 6147 5568 1 1775 280 229 69 46 chrX 156000001 156000088 -10650208 - L1M3 LINE L1 -616 5564 5476 1 1775 209 57 0 28 chrX 156000088 156000124 -10650172 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 2 1775 568 302 18 36 chrX 156000135 156000303 -10649993 + RSINE1 SINE B4 1 165 0 3 1775 221 232 139 42 chrX 156000547 156000619 -10649677 + L2a LINE L2 3300 3378 -48 4 1775 246 291 58 0 chrX 156001112 156001198 -10649098 - L2a LINE L2 -51 3375 3285 5 1775 368 294 117 102 chrX 156001441 156001725 -10648571 + B4 SINE B4 7 274 -18 6 1775 220 287 68 11 chrX 156001821 156001909 -10648387 - L2a LINE L2 -540 2879 2787 5 1775 230 282 111 22 chrX 156001949 156002130 -10648166 - L1M4 LINE L1 -282 5892 5696 7 1775 579 239 28 74 chrX 156002142 156002359 -10647937 - L1M4 LINE L1 -692 5482 5276 7 1775 396 250 16 94 chrX 156002365 156002493 -10647803 - PB1D9 SINE Alu 0 120 3 8 1775 693 261 7 0 chrX 156002515 156002653 -10647643 + RSINE1 SINE B4 4 142 -23 9 1775 23 0 0 0 chrX 156002656 156002679 -10647617 + AT_rich Low_complexity Low_complexity 1 23 0 1 1775 401 267 101 60 chrX 156003054 156003253 -10647043 - L1ME4a LINE L1 -63 6061 5855 1 1775 216 305 189 47 chrX 156003460 156003608 -10646688 - L2c LINE L2 -228 3159 2991 1 1775 353 286 72 64 chrX 156004669 156004793 -10645503 - L1MB7 LINE L1 -9 6175 6061 1 1775 544 271 22 15 chrX 156004793 156004928 -10645368 - B1F SINE Alu -10 139 4 1 1775 353 286 72 64 chrX 156004928 156005038 -10645258 - L1MB7 LINE L1 -124 6060 5939 1 1775 419 280 171 6 chrX 156005095 156005253 -10645043 - MLT1F2 LTR MaLR -376 184 1 1 1775 2110 208 35 64 chrX 156006600 156007135 -10643161 - RLTR11A2 LTR ERVK 0 527 8 1 1775 602 280 0 0 chrX 156007169 156007294 -10643002 - B3A SINE B2 -41 157 33 1 1775 379 270 0 0 chrX 156007520 156007594 -10642702 - B4A SINE B4 -2 290 217 1 1775 595 211 225 34 chrX 156007929 156008165 -10642131 - Lx8 LINE L1 -942 6531 6251 1 1775 1429 242 118 0 chrX 156008169 156008541 -10641755 - MTD LTR MaLR -3 416 1 2 1775 523 224 263 23 chrX 156008545 156008792 -10641504 - MTD-int LTR MaLR -2 1256 988 2 1775 279 311 49 8 chrX 156009127 156009285 -10641011 - Lx8 LINE L1 -1685 5959 5795 1 1775 402 272 85 49 chrX 156009293 156009378 -10640918 - L1M2 LINE L1 -610 5702 5608 2 1775 1193 46 33 0 chrX 156009378 156009552 -10640744 - L1_Mus1 LINE L1 0 6567 6404 2 1775 402 270 50 50 chrX 156009552 156009715 -10640581 - L1M2 LINE L1 -693 5607 5439 2 1775 979 267 20 0 chrX 156009734 156009936 -10640360 - B3 SINE B2 -9 207 2 2 1775 1126 275 49 49 chrX 156009936 156010422 -10639874 - Lx8 LINE L1 -474 5406 4921 1 1775 3476 266 96 40 chrX 156010413 156011334 -10638962 + L1_Mur3 LINE L1 2973 3927 -1953 2 1775 522 276 102 20 chrX 156011334 156011530 -10638766 + B3 SINE B2 4 215 -1 2 1775 3476 266 96 40 chrX 156011530 156012447 -10637849 + L1_Mur3 LINE L1 3928 4915 -965 2 1775 718 296 131 5 chrX 156012451 156012665 -10637631 - B4A SINE B4 -51 241 1 2 1775 429 20 0 0 chrX 156013116 156013166 -10637130 + (GAAA)n Simple_repeat Simple_repeat 4 53 0 2 1775 2345 178 67 129 chrX 156013305 156013875 -10636421 - RMER15 LTR ERVL 0 575 42 2 1775 221 0 0 33 chrX 156013875 156013905 -10636391 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1775 1006 116 0 0 chrX 156013905 156014043 -10636253 - B1_Mus1 SINE Alu -10 138 1 3 1775 2345 178 67 129 chrX 156014043 156014084 -10636212 - RMER15 LTR ERVL -534 41 2 2 1775 982 322 92 9 chrX 156014365 156014800 -10635496 - Lx8 LINE L1 -454 7019 6549 3 1775 406 268 0 20 chrX 156014808 156014907 -10635389 - Lx8 LINE L1 -1153 6320 6224 3 1775 1141 76 0 0 chrX 156014950 156015095 -10635201 - B1_Mm SINE Alu -2 145 1 3 1775 344 308 0 0 chrX 156015628 156015706 -10634590 - ID4_ SINE ID -3 80 3 3 1775 1225 191 63 41 chrX 156015804 156016072 -10634224 + ORR1C2 LTR MaLR 111 384 0 3 1775 11752 163 126 97 chrX 156016237 156018533 -10631763 - Lx2B LINE L1 -145 6855 4638 3 1775 306 0 0 0 chrX 156018533 156018567 -10631729 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 3 1775 11752 140 203 169 chrX 156018567 156018841 -10631455 - Lx2B LINE L1 -1240 4637 4438 3 1775 263 203 71 14 chrX 156018841 156018911 -10631385 + 4.5SRNA scRNA scRNA 13 86 -8 3 1775 845 57 0 0 chrX 156018854 156018960 -10631336 + B1_Mm SINE Alu 33 138 -9 3 1775 11752 140 203 169 chrX 156018960 156019738 -10630558 - Lx2B LINE L1 -1240 4437 3867 3 1775 1289 50 0 0 chrX 156019738 156019899 -10630397 + B2_Mm2 SINE B2 1 161 -34 3 1775 234 0 0 0 chrX 156019899 156019925 -10630371 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 4 1775 849 192 85 66 chrX 156019925 156019975 -10630321 + B3 SINE B2 180 216 0 4 1775 11752 140 203 169 chrX 156019975 156021341 -10628955 - Lx2B LINE L1 -2011 3866 1718 3 1775 1652 21 5 0 chrX 156021341 156021532 -10628764 - B2_Mm1a SINE B2 0 193 2 4 1775 11752 156 140 114 chrX 156021532 156022335 -10627961 - Lx2B LINE L1 -4160 1717 927 3 1775 368 256 101 94 chrX 156022388 156022526 -10627770 + B1F SINE Alu 10 148 -1 4 1775 232 318 0 0 chrX 156023044 156023132 -10627164 - Lx2B LINE L1 -6028 956 869 3 1775 23 33 0 0 chrX 156023477 156023507 -10626789 + AT_rich Low_complexity Low_complexity 1 30 0 4 1775 1342 279 28 18 chrX 156023937 156024560 -10625736 + L1MA4 LINE L1 5230 5826 -465 4 1775 749 280 32 50 chrX 156024578 156024854 -10625442 - L1M2 LINE L1 -879 5264 4985 4 1775 1154 55 0 27 chrX 156024854 156025004 -10625292 - B1_Mus2 SINE Alu 0 147 2 4 1775 749 280 32 50 chrX 156025004 156025129 -10625167 - L1M2 LINE L1 -1159 4984 4870 4 1775 303 303 127 9 chrX 156025708 156025818 -10624478 + B1F1 SINE Alu 10 132 -17 4 1775 1285 14 0 0 chrX 156025861 156026008 -10624288 - B1_Mm SINE Alu 0 147 1 4 1775 28 29 0 0 chrX 156026094 156026129 -10624167 + AT_rich Low_complexity Low_complexity 1 35 0 5 1775 1278 14 0 0 chrX 156027128 156027273 -10623023 + B1_Mus2 SINE Alu 3 147 0 5 1775 640 220 28 20 chrX 156027555 156027711 -10622585 + B3 SINE B2 1 146 -49 5 1775 255 271 49 104 chrX 156027737 156027881 -10622415 - MT2B LTR ERVL -299 302 167 5 1775 572 254 8 23 chrX 156027753 156027882 -10622414 - B1_Mur1 SINE Alu -21 128 2 5 1775 450 252 121 9 chrX 156027893 156028009 -10622287 - B1_Mur1 SINE Alu 0 149 21 5 1775 289 378 84 52 chrX 156028115 156028366 -10621930 + B4A SINE B4 1 259 -33 5 1775 219 226 38 0 chrX 156028398 156028451 -10621845 + GA-rich Low_complexity Low_complexity 3 57 0 5 1775 729 155 14 40 chrX 156028655 156028803 -10621493 + B1_Mus1 SINE Alu 5 148 0 5 1775 409 272 121 17 chrX 156031370 156031527 -10618769 - ID_B1 SINE B4 -5 219 2 5 1775 1058 120 69 0 chrX 156031540 156031557 -10618739 - B2_Mm1t SINE B2 -6 187 162 6 1775 387 0 0 0 chrX 156031557 156031600 -10618696 + (TTA)n Simple_repeat Simple_repeat 3 45 0 6 1775 1058 120 69 0 chrX 156031600 156031757 -10618539 - B2_Mm1t SINE B2 -32 161 2 6 1775 830 138 7 21 chrX 156031802 156031943 -10618353 + B1_Mm SINE Alu 9 147 0 6 1775 715 211 105 6 chrX 156031949 156031964 -10618332 - B3 SINE B2 -27 189 173 6 1775 3622 120 193 81 chrX 156031964 156032779 -10617517 - RMER17A2 LTR ERVK 0 906 1 6 1775 715 211 105 6 chrX 156032779 156032935 -10617361 - B3 SINE B2 -44 172 2 6 1775 639 230 37 7 chrX 156033370 156033506 -10616790 + B1F SINE Alu 3 142 -7 6 1775 260 337 65 0 chrX 156033568 156033660 -10616636 + L2b LINE L2 3272 3369 -6 6 1775 1176 68 0 0 chrX 156033776 156033922 -10616374 + B1_Mus1 SINE Alu 1 146 -2 6 1775 253 264 173 85 chrX 156033984 156034232 -10616064 - B4 SINE B4 -18 274 5 6 1775 180 303 70 77 chrX 156034267 156034410 -10615886 - L2c LINE L2 -24 3363 3222 6 1775 1974 174 46 19 chrX 156034612 156035022 -10615274 - MTC LTR MaLR 0 421 1 7 1775 239 0 32 0 chrX 156035140 156035171 -10615125 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 7 1775 183 42 0 0 chrX 156035468 156035492 -10614804 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 7 1775 212 256 0 23 chrX 156035588 156035632 -10614664 - ID2 SINE ID -37 46 4 7 1775 1729 164 59 67 chrX 156036245 156036632 -10613664 + ORR1C2 LTR MaLR 1 384 0 7 1775 843 136 36 0 chrX 156037224 156037364 -10612932 - B1_Mus2 SINE Alu 0 147 3 7 1775 188 182 23 0 chrX 156037746 156037790 -10612506 + CT-rich Low_complexity Low_complexity 2 46 0 7 1775 324 256 79 32 chrX 156038047 156038153 -10612143 - B1F SINE Alu 0 120 2 7 1775 474 260 94 0 chrX 156038365 156038546 -10611750 + L1M3 LINE L1 5601 5798 -382 7 1775 467 295 96 20 chrX 156038572 156038821 -10611475 + Lx7 LINE L1 7054 7321 -375 7 1775 217 210 36 24 chrX 156038826 156038909 -10611387 + T-rich Low_complexity Low_complexity 2 85 0 8 1775 764 260 25 15 chrX 156039082 156039281 -10611015 + B3 SINE B2 1 201 -15 8 1775 266 297 153 6 chrX 156039299 156039475 -10610821 - L1ME2z LINE L1 -3 6176 5975 8 1775 837 123 0 23 chrX 156039672 156039805 -10610491 - B1_Mur3 SINE Alu -10 139 10 8 1775 306 0 0 0 chrX 156039957 156039991 -10610305 + (TG)n Simple_repeat Simple_repeat 1 34 0 8 1775 2570 90 140 55 chrX 156040101 156040491 -10609805 - RLTR28 LTR ERVL -12 512 64 8 1775 1209 49 0 0 chrX 156040491 156040634 -10609662 + B1_Mus1 SINE Alu 5 147 -1 8 1775 2570 90 140 55 chrX 156040634 156040715 -10609581 - RLTR28 LTR ERVL -461 63 1 8 1775 227 222 0 0 chrX 156040720 156040756 -10609540 - RSINE1 SINE B4 -125 40 5 8 1775 240 213 25 51 chrX 156040805 156040884 -10609412 - L1M2 LINE L1 -589 5711 5635 8 1775 3444 184 41 5 chrX 156040953 156041615 -10608681 + Lx5 LINE L1 6357 7042 -8 8 1775 455 324 103 16 chrX 156041791 156042131 -10608165 - L1ME2z LINE L1 -616 5828 5422 8 1775 240 320 40 0 chrX 156042285 156042360 -10607936 - B4A SINE B4 -5 287 210 9 1775 827 235 9 56 chrX 156042392 156042608 -10607688 - B3 SINE B2 -6 210 5 9 1775 422 352 84 30 chrX 156042608 156042810 -10607486 - B4A SINE B4 -72 220 8 9 1775 945 197 62 5 chrX 156043496 156043690 -10606606 + B3 SINE B2 2 206 -10 9 1775 329 301 231 18 chrX 156043843 156044012 -10606284 - L1MC4a LINE L1 -1144 6738 6534 9 1775 518 243 0 27 chrX 156044173 156044283 -10606013 + PB1D7 SINE Alu 11 117 -3 9 1775 338 284 19 19 chrX 156044655 156044759 -10605537 - B4 SINE B4 -184 108 5 9 1775 253 0 54 0 chrX 156045054 156045091 -10605205 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 9 1775 514 132 0 0 chrX 156045681 156045757 -10604539 + ORR1C2 LTR MaLR 1 76 -308 9 1775 333 137 41 21 chrX 156045764 156045861 -10604435 + (TCTCTG)n Simple_repeat Simple_repeat 2 100 0 9 1775 330 216 12 0 chrX 156046282 156046373 -10603923 - L1MA5A LINE L1 -415 5885 5794 9 1775 590 233 131 0 chrX 156046373 156046549 -10603747 - B3 SINE B2 -17 199 1 1 1775 234 0 0 0 chrX 156046656 156046682 -10603614 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 1 1775 499 199 27 27 chrX 156046682 156046832 -10603464 - L1MA5A LINE L1 -807 5496 5347 9 1775 3733 71 6 0 chrX 156047331 156047825 -10602471 - L1_Mus2 LINE L1 0 6566 6070 1 1775 526 268 97 88 chrX 156047848 156048065 -10602231 - ID_B1 SINE B4 -5 219 1 1 1775 374 279 92 7 chrX 156048136 156048277 -10602019 - MIR SINE MIR -33 229 77 1 1775 24 53 0 0 chrX 156048508 156048546 -10601750 + AT_rich Low_complexity Low_complexity 1 38 0 1 1775 663 114 38 0 chrX 156048767 156048925 -10601371 + (CAGA)n Simple_repeat Simple_repeat 2 165 0 1 1775 984 106 0 0 chrX 156048925 156049104 -10601192 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 1775 223 318 69 23 chrX 156049467 156049554 -10600742 + MIRb SINE MIR 100 190 -78 1 1775 198 0 0 0 chrX 156049804 156049826 -10600470 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 1775 25 0 0 0 chrX 156049833 156049858 -10600438 + AT_rich Low_complexity Low_complexity 1 25 0 1 1775 2928 68 167 9 chrX 156049955 156050387 -10599909 + L1Md_F2 LINE L1 6080 6579 -3 1 1775 411 243 19 28 chrX 156050423 156050529 -10599767 - B4A SINE B4 -65 227 123 1 1775 431 304 7 36 chrX 156050678 156050818 -10599478 + ID_B1 SINE B4 82 217 -7 1 1775 927 92 0 0 chrX 156050818 156050949 -10599347 + (CAGC)n Simple_repeat Simple_repeat 4 134 0 1 1775 411 266 9 18 chrX 156051049 156051160 -10599136 + PB1D10 SINE Alu 1 110 -7 1 1775 1828 133 209 23 chrX 156051314 156051668 -10598628 + MTC LTR MaLR 2 421 0 1 1775 225 0 0 0 chrX 156051679 156051704 -10598592 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 1 1775 811 221 76 29 chrX 156051754 156051964 -10598332 + MTEa LTR MaLR 2 221 -158 1 1775 389 86 0 28 chrX 156051971 156052043 -10598253 + (TCTCTG)n Simple_repeat Simple_repeat 4 73 0 1 1775 1348 181 27 55 chrX 156052115 156052408 -10597888 - RMER1C Other Other -1 1341 1057 1 1775 335 143 95 0 chrX 156052524 156052587 -10597709 - RMER10A LTR ERVL -25 417 349 1 1775 2128 206 26 84 chrX 156052780 156053316 -10596980 + RMER19C LTR ERVK 107 611 0 1 1775 1298 62 51 0 chrX 156053355 156053531 -10596765 - B2_Mm2 SINE B2 -6 189 5 1 1775 10482 82 131 16 chrX 156053554 156055212 -10595084 + RLTR22_Mur LTR ERVK 1 1848 0 1 1775 335 89 0 18 chrX 156055374 156055431 -10594865 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1775 252 262 321 0 chrX 156055433 156055517 -10594779 - RSINE1 SINE B4 -24 141 31 1 1775 204 328 137 8 chrX 156055595 156055712 -10594584 - MER5A DNA MER1_type -22 167 36 1 1775 207 0 0 0 chrX 156055742 156055765 -10594531 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1775 337 164 16 0 chrX 156056258 156056319 -10593977 - B3 SINE B2 0 216 155 1 1775 295 174 337 0 chrX 156056437 156056523 -10593773 - B3A SINE B2 -83 115 1 1 1775 1076 70 7 20 chrX 156056669 156056815 -10593481 + B1_Mus2 SINE Alu 4 147 0 1 1775 250 24 47 23 chrX 156056815 156056858 -10593438 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 1 1775 949 263 83 15 chrX 156056860 156057184 -10593112 - L1MB8 LINE L1 -18 6160 5815 1 1775 1146 211 14 14 chrX 156057321 156057537 -10592759 + B3 SINE B2 1 216 0 1 1775 667 115 81 8 chrX 156057562 156057685 -10592611 + B1_Mus2 SINE Alu 15 146 -1 1 1775 296 210 0 138 chrX 156057846 156057962 -10592334 + MT2B LTR ERVL 154 253 -348 1 1775 662 194 0 35 chrX 156057870 156058014 -10592282 + B1_Mur2 SINE Alu 9 147 -2 1 1775 667 187 35 35 chrX 156058545 156058570 -10591726 + B1_Mur1 SINE Alu 6 27 -122 1 1775 1401 116 0 131 chrX 156058570 156058829 -10591467 + URR1B DNA MER1_type 1 225 0 1 1775 667 187 35 35 chrX 156058829 156058947 -10591349 + B1_Mur1 SINE Alu 28 149 0 1 1775 1069 258 65 29 chrX 156059320 156059596 -10590700 - B4 SINE B4 -6 286 1 1 1775 450 108 0 0 chrX 156059692 156059775 -10590521 + (GA)n Simple_repeat Simple_repeat 1 83 0 1 1775 378 267 44 11 chrX 156059794 156059885 -10590411 - RSINE1 SINE B4 -8 157 64 1 1775 493 255 67 47 chrX 156060274 156060467 -10589829 - L1MC4a LINE L1 -524 7358 7162 1 1775 539 264 60 44 chrX 156060485 156060667 -10589629 - B3 SINE B2 -28 188 4 1 1775 2006 146 0 27 chrX 156060669 156061000 -10589296 + ORR1A3 LTR MaLR 1 322 -4 1 1775 738 219 14 14 chrX 156061008 156061156 -10589140 - B1F SINE Alu 0 149 2 1 1775 258 348 40 85 chrX 156061156 156061177 -10589119 - B4 SINE B4 -61 196 64 1 1775 799 221 53 24 chrX 156061283 156061492 -10588804 - B3 SINE B2 -1 215 1 1 1775 225 209 150 90 chrX 156061514 156061614 -10588682 - L1MC4a LINE L1 -870 6915 6810 1 1775 538 278 28 38 chrX 156062588 156062801 -10587495 + RLTR42-int LTR ERVK 1189 1399 -4123 1 1775 663 201 83 0 chrX 156063276 156063420 -10586876 - B3 SINE B2 -12 204 49 1 1775 22 70 0 0 chrX 156065119 156065162 -10585134 + GC_rich Low_complexity Low_complexity 1 43 0 1 1775 381 162 0 0 chrX 156065255 156065323 -10584973 + T-rich Low_complexity Low_complexity 1 68 0 1 1775 245 172 16 0 chrX 156065384 156065448 -10584848 + (CAG)n Simple_repeat Simple_repeat 3 67 0 1 1775 961 122 0 26 chrX 156067693 156068032 -10582264 + (CA)n Simple_repeat Simple_repeat 1 330 0 1 1775 961 289 180 9 chrX 156068905 156069366 -10580930 - MER90a LTR ERV1 -2 612 73 1 1775 237 343 0 0 chrX 156069701 156069768 -10580528 + MER5A DNA MER1_type 88 154 -35 1 1775 605 305 0 0 chrX 156069802 156069953 -10580343 - RSINE1 SINE B4 -14 151 1 1 1775 269 273 14 117 chrX 156070269 156070414 -10579882 + MLT1A1 LTR MaLR 19 148 -260 1 1775 436 278 13 44 chrX 156070453 156070611 -10579685 + MLT1A1 LTR MaLR 256 408 0 1 1775 1245 115 27 16 chrX 156070697 156070883 -10579413 - B2_Mm2 SINE B2 -7 188 1 1 1775 438 256 182 17 chrX 156071164 156071388 -10578908 - MLT1D LTR MaLR -2 503 216 1 1775 528 81 0 0 chrX 156071778 156071852 -10578444 + (GA)n Simple_repeat Simple_repeat 1 74 0 1 1775 335 78 0 19 chrX 156072232 156072284 -10578012 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1 1775 373 233 0 0 chrX 156072284 156072357 -10577939 - ID2 SINE ID -9 74 2 1 1775 243 260 78 0 chrX 156072382 156072459 -10577837 - L1MB4 LINE L1 -51 6129 6047 1 1775 297 303 10 10 chrX 156073889 156073989 -10576307 - PB1 SINE Alu -5 122 23 1 1775 489 239 171 0 chrX 156074330 156074447 -10575849 - ID_B1 SINE B4 -3 221 85 1 1775 25 0 0 0 chrX 156074456 156074481 -10575815 + AT_rich Low_complexity Low_complexity 1 25 0 1 1775 885 221 0 6 chrX 156074572 156074749 -10575547 - B3 SINE B2 -39 177 2 1 1775 377 86 17 0 chrX 156075043 156075101 -10575195 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 1 1775 1238 54 0 0 chrX 156075101 156075248 -10575048 - B1_Mus2 SINE Alu 0 147 1 1 1775 273 57 0 0 chrX 156075350 156075385 -10574911 + (TCCA)n Simple_repeat Simple_repeat 3 37 0 1 1775 210 171 0 0 chrX 156075663 156075704 -10574592 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1775 1241 47 0 0 chrX 156076296 156076444 -10573852 + B1_Mus1 SINE Alu 1 148 0 1 1775 226 306 0 23 chrX 156076792 156076879 -10573417 + CT-rich Low_complexity Low_complexity 4 88 0 1 1775 378 265 31 0 chrX 156077178 156077276 -10573020 - PB1D7 SINE Alu -7 113 13 1 1775 3884 77 11 8 chrX 156077277 156077799 -10572497 + L1Md_F2 LINE L1 6057 6580 -2 1 1775 443 142 36 54 chrX 156077818 156077930 -10572366 - L1Md_F3 LINE L1 -2 6582 6473 1 1775 340 270 135 29 chrX 156078595 156078842 -10571454 - B4A SINE B4 -5 287 2 1 1775 759 262 14 12 chrX 156079095 156079308 -10570988 - B3A SINE B2 0 216 1 1 1775 220 276 0 17 chrX 156079375 156079434 -10570862 + CT-rich Low_complexity Low_complexity 4 61 0 1 1775 459 189 0 83 chrX 156079508 156079629 -10570667 + PB1D10 SINE Alu 1 111 -6 1 1775 365 324 7 0 chrX 156079641 156079777 -10570519 + B1F SINE Alu 5 141 -8 1 1775 413 319 40 54 chrX 156080649 156080871 -10569425 + B4 SINE B4 1 219 -73 1 1775 1080 87 0 0 chrX 156080881 156081019 -10569277 + B1_Mus1 SINE Alu 1 138 -10 1 1775 682 217 188 35 chrX 156081087 156081369 -10568927 - L1MB3 LINE L1 -48 6123 5800 1 1775 603 293 7 0 chrX 156082721 156082871 -10567425 + B3A SINE B2 2 152 -46 1 1775 432 55 0 0 chrX 156082881 156082936 -10567360 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 1775 270 200 286 0 chrX 156083024 156083094 -10567202 - MLT1D LTR MaLR -16 489 400 1 1775 667 282 36 64 chrX 156083113 156083393 -10566903 - MLT1D LTR MaLR -231 274 3 1 1775 415 273 51 90 chrX 156083839 156084016 -10566280 + B4A SINE B4 3 172 -120 1 1775 243 0 0 0 chrX 156084070 156084097 -10566199 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1775 364 202 25 58 chrX 156084280 156084401 -10565895 + MLT1A LTR MaLR 1 117 -257 1 1775 186 103 0 0 chrX 156085900 156085929 -10564367 + (C)n Simple_repeat Simple_repeat 1 29 0 1 1775 526 243 271 50 chrX 156087145 156087161 -10563135 - MLT1D LTR MaLR -7 498 485 1 1775 1372 201 133 27 chrX 156087161 156087345 -10562951 - ORR1D1 LTR MaLR 0 374 172 1 1775 216 0 0 0 chrX 156087345 156087369 -10562927 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1775 450 49 0 0 chrX 156087369 156087429 -10562867 + (GA)n Simple_repeat Simple_repeat 2 62 0 1 1775 1372 201 133 27 chrX 156087429 156087581 -10562715 - ORR1D1 LTR MaLR -203 171 2 1 1775 526 243 271 50 chrX 156087581 156087963 -10562333 - MLT1D LTR MaLR -21 484 12 1 1775 831 178 197 16 chrX 156089189 156089372 -10560924 + B3 SINE B2 1 216 0 1 1775 951 290 62 47 chrX 156089382 156089787 -10560509 - L1MC4a LINE L1 -11 7871 7461 1 1775 255 198 21 104 chrX 156089805 156089901 -10560395 - Lx9 LINE L1 -7 7637 7550 1 1775 458 317 56 25 chrX 156089922 156090207 -10560089 - L1MB4 LINE L1 -41 6139 5846 1 1775 314 45 0 22 chrX 156090217 156090263 -10560033 + ORR1B1 LTR MaLR 344 388 -6 2 1775 238 164 182 0 chrX 156090513 156090568 -10559728 + PB1D10 SINE Alu 48 112 -5 2 1775 518 75 0 48 chrX 156090747 156090831 -10559465 - B3A SINE B2 -118 80 1 2 1775 617 245 13 13 chrX 156091093 156091242 -10559054 - B1_Mur3 SINE Alu 0 149 1 2 1775 454 269 13 46 chrX 156091247 156091399 -10558897 - B1F1 SINE Alu 0 149 3 2 1775 571 269 31 0 chrX 156091608 156091738 -10558558 - ID_B1 SINE B4 -3 221 88 2 1775 345 209 0 52 chrX 156091738 156091834 -10558462 - PB1D10 SINE Alu -5 112 22 2 1775 289 224 15 0 chrX 156092036 156092103 -10558193 - RMER15 LTR ERVL -105 470 403 2 1775 709 312 67 18 chrX 156092113 156092397 -10557899 - Lx8 LINE L1 -261 7212 6915 2 1775 430 146 43 112 chrX 156092420 156092536 -10557760 - Lx9 LINE L1 -172 7472 7365 2 1775 216 259 0 0 chrX 156092555 156092609 -10557687 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1775 645 295 184 4 chrX 156092621 156092866 -10557430 - B4A SINE B4 0 292 4 2 1775 417 284 97 0 chrX 156092898 156093053 -10557243 - MLT1C LTR MaLR -297 170 1 2 1775 984 207 9 33 chrX 156093276 156093491 -10556805 - B3 SINE B2 -1 215 6 2 1775 390 42 0 0 chrX 156093856 156093904 -10556392 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1775 450 0 0 0 chrX 156093904 156093953 -10556343 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 1775 1617 32 5 0 chrX 156094465 156094653 -10555643 + B2_Mm1t SINE B2 1 189 -4 2 1775 768 283 28 5 chrX 156094865 156095078 -10555218 + MER58A DNA MER1_type 7 224 0 2 1775 1055 36 0 0 chrX 156095101 156095238 -10555058 + B1_Mus1 SINE Alu 12 148 0 2 1775 477 171 0 0 chrX 156096274 156096362 -10553934 + GA-rich Low_complexity Low_complexity 2 89 0 2 1775 419 286 34 0 chrX 156097079 156097198 -10553098 - MLT1G3 LTR MaLR -57 538 416 2 1775 286 246 103 44 chrX 156097402 156097538 -10552758 - B1_Mur2 SINE Alu -1 148 5 2 1775 4286 177 141 25 chrX 156097607 156098559 -10551737 + RMER1B Other Other 2 1063 -3 2 1775 732 253 11 33 chrX 156098572 156098752 -10551544 - B3A SINE B2 -18 180 5 2 1775 282 297 65 48 chrX 156098842 156098966 -10551330 - L2a LINE L2 -5 3421 3296 2 1775 270 0 0 0 chrX 156099056 156099086 -10551210 + (TTA)n Simple_repeat Simple_repeat 2 31 0 2 1775 919 136 0 14 chrX 156099089 156099231 -10551065 - B1_Mus1 SINE Alu -8 140 1 2 1775 258 313 94 61 chrX 156099825 156100155 -10550141 - ORR1E LTR MaLR 0 359 19 2 1775 295 289 33 66 chrX 156100165 156100317 -10549979 + MT2B2 LTR ERVL 93 239 -345 2 1775 754 179 36 0 chrX 156100237 156100377 -10549919 + B1_Mur2 SINE Alu 5 149 0 2 1775 3134 33 0 0 chrX 156100377 156100739 -10549557 + L1_Mus1 LINE L1 6147 6508 -59 2 1775 4514 10 2 0 chrX 156100739 156101231 -10549065 + MT2_Mm LTR ERVL 1 493 0 2 1775 41464 16 14 0 chrX 156101231 156106519 -10543777 + MERVL-int LTR ERVL 1 5360 -125 2 1775 362 167 46 35 chrX 156106519 156106606 -10543690 + ORR1A3-int LTR MaLR 553 640 -1323 2 1775 321 0 0 0 chrX 156106606 156106644 -10543652 + MERVL-int LTR ERVL 5448 5485 0 2 221 4514 10 2 0 chrX 156106644 156107136 -10543160 + MT2_Mm LTR ERVL 1 493 0 2 1776 484 31 0 0 chrX 156107136 156107200 -10543096 + L1_Mus1 LINE L1 6504 6567 0 2 1776 1047 217 29 10 chrX 156107410 156107619 -10542677 - B3 SINE B2 -2 214 2 2 1776 407 309 35 35 chrX 156107682 156107823 -10542473 + B1F1 SINE Alu 9 149 0 2 1776 26 30 0 0 chrX 156107930 156107963 -10542333 + AT_rich Low_complexity Low_complexity 1 33 0 2 1776 685 107 15 22 chrX 156108015 156108149 -10542147 + (TTCTC)n Simple_repeat Simple_repeat 4 136 0 2 1776 486 250 80 23 chrX 156108311 156108487 -10541809 - L1MC5 LINE L1 -800 7161 6976 2 1776 303 251 150 155 chrX 156108537 156108628 -10541668 - B4A SINE B4 0 292 91 2 1776 471 179 27 54 chrX 156108628 156108740 -10541556 - PB1D9 SINE Alu -1 119 11 2 1776 543 132 59 52 chrX 156108780 156108916 -10541380 - Lx9 LINE L1 -1 7643 7507 2 1776 562 284 74 0 chrX 156108916 156109078 -10541218 - B4A SINE B4 -118 174 1 2 1776 549 238 102 27 chrX 156109356 156109503 -10540793 - B3 SINE B2 -6 210 53 2 1776 603 309 111 0 chrX 156110065 156110126 -10540170 - B4 SINE B4 0 292 230 2 1776 505 0 31 0 chrX 156110126 156110191 -10540105 + (TC)n Simple_repeat Simple_repeat 1 67 0 2 1776 603 309 111 0 chrX 156110191 156110372 -10539924 - B4 SINE B4 -63 229 24 2 1776 242 191 77 31 chrX 156111064 156111129 -10539167 + Kanga2_a DNA Tc2 781 848 -40 2 1776 197 93 0 65 chrX 156112750 156112796 -10537500 + A-rich Low_complexity Low_complexity 1 43 0 2 1776 418 252 38 76 chrX 156113424 156113599 -10536697 - L1ME1 LINE L1 -77 6102 5932 2 1776 196 284 14 56 chrX 156113731 156113802 -10536494 + MIR3 SINE MIR 113 180 -28 2 1776 240 59 0 0 chrX 156114372 156114406 -10535890 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1776 461 213 94 0 chrX 156114941 156115068 -10535228 - MER33 DNA MER1_type -4 320 182 2 1776 686 246 29 0 chrX 156115930 156116068 -10534228 + RSINE1 SINE B4 2 143 -22 2 1776 886 226 56 10 chrX 156116099 156116296 -10534000 - B3 SINE B2 -10 206 1 2 1776 282 273 22 11 chrX 156116298 156116387 -10533909 - MER33 DNA MER1_type -229 95 6 2 1776 337 272 0 12 chrX 156117589 156117671 -10532625 - ID4 SINE ID -1 82 2 2 1776 893 246 55 0 chrX 156117704 156117903 -10532393 - B3 SINE B2 -6 210 1 2 1776 357 308 120 17 chrX 156118267 156118508 -10531788 - Charlie7 DNA MER1_type -1988 624 359 2 1776 267 293 0 0 chrX 156119060 156119118 -10531178 - PB1 SINE Alu -69 58 1 2 1776 402 296 35 14 chrX 156119136 156119280 -10531016 - B1F SINE Alu 0 149 3 2 1776 279 0 0 0 chrX 156119322 156119353 -10530943 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 1776 446 289 89 71 chrX 156119353 156119630 -10530666 - B4 SINE B4 0 292 13 2 1776 220 65 0 61 chrX 156120148 156120197 -10530099 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 2 1776 1091 48 0 58 chrX 156120197 156120353 -10529943 - B1_Mm SINE Alu 0 147 1 2 1776 423 248 74 0 chrX 156120399 156120520 -10529776 + L1MA5 LINE L1 6164 6293 -7 2 1776 21 0 0 0 chrX 156121885 156121906 -10528390 + AT_rich Low_complexity Low_complexity 1 21 0 2 1776 998 276 75 33 chrX 156124300 156124764 -10525532 - Lx8 LINE L1 -1 7472 6960 2 1776 2297 110 60 9 chrX 156124764 156125113 -10525183 - ORR1B2 LTR MaLR 0 367 1 2 1776 998 299 70 24 chrX 156125113 156125195 -10525101 - Lx8 LINE L1 -514 6959 6868 2 1776 389 287 192 45 chrX 156125270 156125733 -10524563 - L1ME3 LINE L1 -5 6159 5629 2 1776 525 268 104 8 chrX 156125970 156126211 -10524085 - LTR37B LTR ERV1 0 468 205 2 1776 246 299 30 0 chrX 156127377 156127444 -10522852 - ID2 SINE ID 0 83 15 2 1776 187 290 0 61 chrX 156127895 156127961 -10522335 - MIRb SINE MIR -15 253 192 2 1776 205 254 13 53 chrX 156128051 156128126 -10522170 - MIR SINE MIR -155 107 36 2 1776 639 230 21 28 chrX 156128270 156128413 -10521883 + B1_Mur1 SINE Alu 3 144 -5 2 1776 743 217 0 40 chrX 156129192 156129341 -10520955 + ID_B1 SINE B4 79 221 -3 2 1776 237 33 0 0 chrX 156129488 156129518 -10520778 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 1776 189 0 0 0 chrX 156129518 156129539 -10520757 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1776 510 170 0 0 chrX 156129538 156129632 -10520664 + (TA)n Simple_repeat Simple_repeat 2 95 0 2 1776 1256 48 0 0 chrX 156129837 156129984 -10520312 + B1_Mm SINE Alu 1 147 0 2 1776 273 57 0 0 chrX 156129984 156130019 -10520277 + (A)n Simple_repeat Simple_repeat 1 35 0 2 1776 602 316 185 12 chrX 156130021 156130518 -10519778 + MLT1E2 LTR MaLR 13 595 -32 2 1776 853 295 59 15 chrX 156131041 156131382 -10518914 - L1MEf LINE L1 -3255 2891 2536 2 1776 285 250 120 0 chrX 156131425 156131517 -10518779 - Tigger5 DNA MER2_type -4 2402 2300 2 1776 797 316 20 4 chrX 156131508 156131753 -10518543 - Tigger5 DNA MER2_type -2157 249 1 2 1776 193 29 29 29 chrX 156131789 156131824 -10518472 + (TA)n Simple_repeat Simple_repeat 1 35 0 2 1776 443 259 58 165 chrX 156131988 156132400 -10517896 + RMER10A LTR ERVL 13 380 -62 2 1776 2288 135 5 15 chrX 156132408 156132443 -10517853 - ORR1B1 LTR MaLR -8 386 353 2 1776 1668 27 0 0 chrX 156132443 156132631 -10517665 - B2_Mm1a SINE B2 -5 188 1 2 1776 2288 135 5 15 chrX 156132631 156132985 -10517311 - ORR1B1 LTR MaLR -42 352 1 2 1776 326 256 221 16 chrX 156133031 156133158 -10517138 - Lx8 LINE L1 -249 7224 7072 2 1776 277 222 110 14 chrX 156133401 156133474 -10516822 - B4A SINE B4 -211 81 2 2 1776 788 288 149 11 chrX 156133481 156133958 -10516338 - L1MEf LINE L1 -4812 1430 888 2 1776 241 288 34 0 chrX 156133993 156134052 -10516244 - B1F2 SINE Alu -86 63 3 2 1776 234 91 0 0 chrX 156134071 156134104 -10516192 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 1776 335 303 22 11 chrX 156134107 156134197 -10516099 - RSINE1 SINE B4 0 165 75 2 1776 413 250 56 8 chrX 156134199 156134324 -10515972 + L1MA9 LINE L1 6182 6312 0 2 1776 189 0 0 0 chrX 156134410 156134431 -10515865 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 2 1776 635 108 10 0 chrX 156134887 156134989 -10515307 + (GA)n Simple_repeat Simple_repeat 1 103 0 2 1776 261 139 0 0 chrX 156135930 156135973 -10514323 + (T)n Simple_repeat Simple_repeat 1 43 0 2 1776 502 279 115 34 chrX 156137437 156137721 -10512575 - RMER20B LTR ERVK -91 425 118 2 1776 274 346 12 0 chrX 156138141 156138222 -10512074 + RSINE1 SINE B4 25 106 -59 2 1776 350 42 21 0 chrX 156138238 156138286 -10512010 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1776 229 297 16 88 chrX 156138638 156138830 -10511466 + L1MCb LINE L1 90 267 -5778 2 1776 216 0 0 0 chrX 156138974 156138998 -10511298 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1776 207 0 0 0 chrX 156139259 156139282 -10511014 + (T)n Simple_repeat Simple_repeat 1 23 0 2 1776 745 283 0 34 chrX 156139649 156139854 -10510442 - B3A SINE B2 0 198 1 3 1776 335 295 98 30 chrX 156139860 156139993 -10510303 - B1F2 SINE Alu -7 142 1 3 1776 212 171 0 0 chrX 156140233 156140274 -10510022 + A-rich Low_complexity Low_complexity 1 41 0 3 1776 1151 68 7 0 chrX 156140458 156140604 -10509692 + B1_Mus1 SINE Alu 2 148 0 3 1776 272 83 21 0 chrX 156140616 156140664 -10509632 + (CCAA)n Simple_repeat Simple_repeat 2 50 0 3 1776 246 62 0 0 chrX 156140787 156140819 -10509477 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 3 1776 21 0 0 0 chrX 156141436 156141457 -10508839 + AT_rich Low_complexity Low_complexity 1 21 0 3 1776 1086 216 9 24 chrX 156141839 156142052 -10508244 + B3 SINE B2 4 213 -3 3 1776 195 250 0 37 chrX 156142313 156142367 -10507929 + MER5A DNA MER1_type 87 138 -51 3 1776 315 0 0 0 chrX 156143211 156143246 -10507050 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1776 567 177 168 0 chrX 156143816 156143929 -10506367 - B3 SINE B2 -82 134 3 3 1776 1039 178 166 0 chrX 156143934 156144187 -10506109 + MTD LTR MaLR 114 408 -11 3 1776 565 273 28 28 chrX 156144401 156144582 -10505714 - L1MB8 LINE L1 -24 6154 5974 3 1776 522 276 13 33 chrX 156144863 156145013 -10505283 + RSINE1 SINE B4 2 148 -17 3 1776 378 0 0 0 chrX 156145237 156145279 -10505017 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1776 194 269 89 13 chrX 156148359 156148438 -10501858 + L2b LINE L2 3013 3097 -290 3 1776 227 400 16 16 chrX 156148613 156148735 -10501561 + L2b LINE L2 3241 3362 -13 3 1776 21 0 0 0 chrX 156148949 156148970 -10501326 + AT_rich Low_complexity Low_complexity 1 21 0 3 1776 220 350 36 14 chrX 156149428 156149567 -10500729 - MIRb SINE MIR -80 188 47 3 1776 465 202 9 9 chrX 156149604 156149709 -10500587 - B3 SINE B2 -6 210 106 3 1776 232 350 0 48 chrX 156149811 156149895 -10500401 - B4 SINE B4 -104 188 109 3 1776 423 98 0 0 chrX 156149923 156149984 -10500312 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 1776 983 53 0 0 chrX 156149984 156150117 -10500179 - B1_Mus1 SINE Alu 0 148 16 3 1776 213 39 0 0 chrX 156152223 156152249 -10498047 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1776 369 304 112 54 chrX 156152362 156152567 -10497729 - MER20 DNA MER1_type -1 218 2 3 1776 327 25 0 0 chrX 156152710 156152750 -10497546 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1776 217 172 34 17 chrX 156153559 156153618 -10496678 + G-rich Low_complexity Low_complexity 4 63 0 3 1776 950 169 89 39 chrX 156153648 156153851 -10496445 + B3 SINE B2 1 213 -3 3 1776 465 285 24 68 chrX 156154966 156155143 -10495153 - RSINE1 SINE B4 0 165 1 3 1776 213 39 0 0 chrX 156156216 156156242 -10494054 + (TAA)n Simple_repeat Simple_repeat 3 28 0 3 1776 490 357 25 82 chrX 156156363 156156717 -10493579 - ORR1E LTR MaLR -20 339 6 3 1776 633 240 149 129 chrX 156156752 156156994 -10493302 - MLT1C LTR MaLR -35 432 177 3 1776 466 246 76 8 chrX 156156994 156157125 -10493171 - B1F SINE Alu -7 142 3 3 1776 633 240 149 129 chrX 156157125 156157299 -10492997 - MLT1C LTR MaLR -291 176 8 3 1776 522 0 0 0 chrX 156158115 156158173 -10492123 + (TATAA)n Simple_repeat Simple_repeat 4 61 0 3 1776 499 288 14 7 chrX 156158237 156158377 -10491919 - ID_B1 SINE B4 0 224 84 3 1776 258 273 0 0 chrX 156158457 156158523 -10491773 + L1MC LINE L1 5763 5828 -2054 3 1776 369 302 517 27 chrX 156158526 156158702 -10491594 + B4A SINE B4 7 271 -21 3 1776 276 30 0 0 chrX 156158702 156158735 -10491561 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1776 242 355 0 45 chrX 156158735 156158759 -10491537 + B4A SINE B4 272 291 -1 3 1776 210 71 0 0 chrX 156158995 156159023 -10491273 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1776 993 244 119 23 chrX 156159895 156160239 -10490057 - L1MB2 LINE L1 -1 6170 5794 3 1776 606 274 0 0 chrX 156160366 156160512 -10489784 - B1F1 SINE Alu -2 147 2 3 1776 22 35 0 0 chrX 156162143 156162172 -10488124 + AT_rich Low_complexity Low_complexity 1 29 0 3 1776 978 231 26 79 chrX 156162225 156162530 -10487766 - B4 SINE B4 -2 290 2 3 1776 291 322 59 8 chrX 156162533 156162652 -10487644 - PB1 SINE Alu 0 127 3 3 1776 236 54 54 0 chrX 156162694 156162731 -10487565 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 3 1776 316 242 89 20 chrX 156162827 156162928 -10487368 - MLT1D LTR MaLR -4 463 356 3 1776 1559 214 21 69 chrX 156162969 156163082 -10487214 + MTD LTR MaLR 3 108 -311 3 1776 243 0 0 0 chrX 156163082 156163109 -10487187 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1776 1559 214 21 69 chrX 156163109 156163417 -10486879 + MTD LTR MaLR 109 404 -15 3 1776 273 75 0 0 chrX 156163417 156163457 -10486839 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 3 1776 428 312 44 60 chrX 156163482 156163731 -10486565 - MLT1D LTR MaLR -259 246 2 3 1776 264 59 0 0 chrX 156163827 156163861 -10486435 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 3 1776 244 314 29 0 chrX 156163977 156164047 -10486249 - B4A SINE B4 -9 283 212 3 1776 315 285 183 0 chrX 156164076 156164262 -10486034 - Lx9 LINE L1 -18 7626 7407 3 1776 624 267 55 5 chrX 156164262 156164480 -10485816 - B4A SINE B4 -63 229 1 3 1776 416 223 53 18 chrX 156164486 156164600 -10485696 - L1MB3 LINE L1 -47 6136 6019 3 1776 23 0 0 0 chrX 156164760 156164783 -10485513 + AT_rich Low_complexity Low_complexity 1 23 0 3 1776 21 0 0 0 chrX 156164923 156164944 -10485352 + AT_rich Low_complexity Low_complexity 1 21 0 3 1776 230 350 12 0 chrX 156165603 156165683 -10484613 - PB1 SINE Alu -4 123 43 3 1776 3962 69 23 4 chrX 156166105 156166617 -10483679 - L1_Mus1 LINE L1 0 6567 6046 3 1776 3220 50 45 19 chrX 156166617 156167042 -10483254 + L1_Mus1 LINE L1 5610 6045 -521 3 1776 187 324 14 0 chrX 156167298 156167369 -10482927 - MER5A DNA MER1_type -84 105 34 3 1776 6601 133 34 8 chrX 156167377 156168411 -10481885 - Lx LINE L1 -5 6649 5589 3 1776 288 130 0 0 chrX 156168488 156168534 -10481762 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1776 1036 264 100 8 chrX 156168781 156169151 -10481145 - L1MA7 LINE L1 -351 5940 5537 3 1776 1923 236 34 43 chrX 156169420 156169926 -10480370 + MER44B DNA MER2_type 45 545 -5 3 1776 478 137 98 18 chrX 156170055 156170162 -10480134 + URR1A DNA MER1_type 75 184 -42 3 1776 441 136 101 11 chrX 156170163 156170252 -10480044 - URR1B DNA MER1_type -23 202 106 3 1776 761 173 27 48 chrX 156172211 156172357 -10477939 - B1_Mur1 SINE Alu -4 145 3 3 1776 1751 270 17 36 chrX 156172577 156173156 -10477140 - Tigger7 DNA MER2_type -1 549 2 3 1776 215 250 26 44 chrX 156174143 156174309 -10475987 + (TCTCTG)n Simple_repeat Simple_repeat 1 163 0 3 1776 2752 246 68 56 chrX 156175138 156176166 -10474130 + L1MA6 LINE L1 5232 6294 -6 3 1776 243 161 339 0 chrX 156176177 156176233 -10474063 + ID2 SINE ID 5 79 -4 3 1776 322 270 43 53 chrX 156176534 156176628 -10473668 - B4A SINE B4 -66 226 134 3 1776 212 244 107 24 chrX 156176640 156176724 -10473572 - B4 SINE B4 -201 91 1 3 1776 50 59 0 0 chrX 156177063 156177148 -10473148 + AT_rich Low_complexity Low_complexity 1 85 0 3 1776 357 203 71 14 chrX 156177372 156177442 -10472854 - ID2 SINE ID -8 75 2 3 1776 25 65 0 0 chrX 156177832 156177878 -10472418 + AT_rich Low_complexity Low_complexity 1 46 0 3 1776 1366 269 116 19 chrX 156178042 156178463 -10471833 + Lx5 LINE L1 6589 7050 0 3 1776 772 165 0 0 chrX 156178904 156179031 -10471265 + B3 SINE B2 4 130 -86 3 1776 189 242 0 0 chrX 156179380 156179413 -10470883 - MIRb SINE MIR -23 245 213 3 1776 405 214 84 37 chrX 156179558 156179665 -10470631 + MLT1D LTR MaLR 5 116 -389 3 1776 23 68 0 0 chrX 156179671 156179715 -10470581 + AT_rich Low_complexity Low_complexity 1 44 0 3 1776 368 272 133 18 chrX 156179749 156179914 -10470382 + L1M2 LINE L1 5105 5288 -855 3 1776 191 204 19 0 chrX 156179915 156179969 -10470327 + (CCA)n Simple_repeat Simple_repeat 1 55 0 3 1776 294 143 0 0 chrX 156179967 156180016 -10470280 + (CAA)n Simple_repeat Simple_repeat 1 49 0 3 1776 562 235 37 29 chrX 156180046 156180182 -10470114 + ID_B1 SINE B4 87 223 -1 3 1776 378 0 0 0 chrX 156180273 156180315 -10469981 + (TC)n Simple_repeat Simple_repeat 1 42 0 3 1776 197 133 0 22 chrX 156180317 156180353 -10469943 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1776 180 0 0 0 chrX 156180353 156180373 -10469923 + (TC)n Simple_repeat Simple_repeat 1 20 0 3 1776 197 133 0 22 chrX 156180373 156180382 -10469914 + (CA)n Simple_repeat Simple_repeat 1 9 0 3 1776 279 79 0 0 chrX 156180404 156180442 -10469854 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1776 327 265 48 29 chrX 156180474 156180579 -10469717 + PB1D10 SINE Alu 3 109 -8 3 1776 553 235 0 36 chrX 156180618 156180755 -10469541 + B1_Mur1 SINE Alu 2 133 -16 3 1776 303 305 165 42 chrX 156180993 156181229 -10469067 - HAL1 LINE L1 -4 2503 2239 3 1776 552 161 0 0 chrX 156181713 156181856 -10468440 + GA-rich Low_complexity Low_complexity 1 143 0 3 1776 444 37 0 0 chrX 156182447 156182501 -10467795 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 1776 315 0 0 0 chrX 156182501 156182535 -10467761 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1776 320 287 17 0 chrX 156183262 156183377 -10466919 + MIR SINE MIR 125 241 -21 3 1776 325 0 44 0 chrX 156183388 156183433 -10466863 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1776 938 277 35 28 chrX 156183471 156183659 -10466637 - B4A SINE B4 0 292 101 3 1776 615 48 0 0 chrX 156183659 156183742 -10466554 + (CA)n Simple_repeat Simple_repeat 1 83 0 3 1776 938 277 35 28 chrX 156183742 156183843 -10466453 - B4A SINE B4 -192 100 2 3 1776 312 255 223 43 chrX 156183943 156183961 -10466335 + ID_B1 SINE B4 65 114 -178 3 1776 579 239 0 0 chrX 156183961 156184070 -10466226 + PB1D9 SINE Alu 10 118 -2 3 1776 312 255 223 43 chrX 156184070 156184112 -10466184 + ID_B1 SINE B4 115 243 -49 3 1776 309 320 9 19 chrX 156184660 156184765 -10465531 + PB1D10 SINE Alu 10 113 -4 3 1776 189 147 0 0 chrX 156185058 156185092 -10465204 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 3 1776 477 267 307 18 chrX 156185264 156185489 -10464807 + B4A SINE B4 1 290 -2 3 1776 741 299 49 53 chrX 156185777 156186139 -10464157 - L1MC LINE L1 -2115 5767 5412 4 1776 8209 37 13 3 chrX 156186827 156188358 -10461938 - L1Md_F2 LINE L1 0 6582 5037 4 1776 701 259 83 64 chrX 156190264 156190578 -10459718 - L1ME3 LINE L1 -1 6161 5842 4 1776 351 0 0 0 chrX 156190590 156190629 -10459667 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1776 748 299 66 36 chrX 156190638 156190912 -10459384 - B4A SINE B4 -10 282 1 4 1776 1263 97 126 5 chrX 156191749 156191947 -10458349 - MTB_Mm LTR MaLR 0 407 186 4 1776 459 0 0 0 chrX 156191949 156192000 -10458296 + (TTCC)n Simple_repeat Simple_repeat 3 53 0 4 1776 1604 122 76 64 chrX 156192000 156192314 -10457982 - Lx LINE L1 -12 6642 6325 4 1776 342 0 0 0 chrX 156192315 156192353 -10457943 + (CTTG)n Simple_repeat Simple_repeat 1 38 0 4 1776 1155 109 0 0 chrX 156192353 156192527 -10457769 + (TTTC)n Simple_repeat Simple_repeat 4 177 0 4 1776 1089 39 46 8 chrX 156192527 156192658 -10457638 - B1_Mus2 SINE Alu -11 136 1 4 1776 1038 135 69 29 chrX 156192663 156192838 -10457458 - MTB_Mm LTR MaLR -216 205 24 4 1776 1557 153 0 81 chrX 156192839 156193137 -10457159 - MTB_Mm LTR MaLR -133 274 1 4 1776 266 262 120 9 chrX 156194084 156194192 -10456104 - L2 LINE L2 -560 2859 2740 4 1776 1872 273 81 56 chrX 156194383 156195186 -10455110 - L1MB4 LINE L1 -18 6162 5340 4 1776 477 0 0 0 chrX 156196069 156196122 -10454174 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1776 18931 7 0 0 chrX 156196896 156199682 -10450614 - L1Md_A LINE L1 0 6582 3797 4 1776 227 156 44 0 chrX 156199748 156199793 -10450503 + CT-rich Low_complexity Low_complexity 2 48 0 4 1776 519 95 0 0 chrX 156199793 156199867 -10450429 + (CA)n Simple_repeat Simple_repeat 2 75 0 4 1776 864 177 0 0 chrX 156199962 156200092 -10450204 - B3 SINE B2 -86 130 1 4 1776 629 268 81 90 chrX 156200092 156200314 -10449982 - B4A SINE B4 -71 221 2 4 1776 492 231 94 0 chrX 156200354 156200471 -10449825 - RSINE1 SINE B4 -36 129 2 4 1776 402 255 138 7 chrX 156200547 156200685 -10449611 - MER58A DNA MER1_type -41 183 28 4 1776 3421 111 10 28 chrX 156200720 156201220 -10449076 - Lx2 LINE L1 -2 6995 6505 4 1776 731 173 17 6 chrX 156201220 156201394 -10448902 + Lx2 LINE L1 6001 6177 -820 4 1776 312 70 0 0 chrX 156202201 156202244 -10448052 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1776 280 261 119 87 chrX 156203182 156203308 -10446988 - B1F1 SINE Alu -6 143 14 4 1776 288 91 0 0 chrX 156205186 156205230 -10445066 + (TTG)n Simple_repeat Simple_repeat 1 44 0 4 1776 414 257 85 9 chrX 156206836 156206942 -10443354 - PB1D7 SINE Alu -6 114 1 4 1776 315 0 0 0 chrX 156207683 156207718 -10442578 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1776 727 167 62 3 chrX 156208095 156208245 -10442051 + RMER19B LTR ERVK 1 157 -580 4 1776 294 196 18 0 chrX 156208235 156208291 -10442005 - RMER19B LTR ERVK -845 57 1 4 1776 226 158 0 73 chrX 156208362 156208403 -10441893 + PB1D9 SINE Alu 27 64 -56 4 1776 549 175 0 0 chrX 156208403 156208569 -10441727 + (TCTCTG)n Simple_repeat Simple_repeat 2 167 0 4 1776 804 221 7 0 chrX 156208596 156208736 -10441560 - B1F SINE Alu -8 141 1 4 1776 330 257 0 0 chrX 156209201 156209275 -10441021 + Tigger16a DNA Tigger 797 870 -63 4 1776 246 295 0 93 chrX 156209216 156209313 -10440983 - Tigger16b DNA Tigger -189 148 61 4 1776 533 258 193 0 chrX 156209527 156209720 -10440576 + B4A SINE B4 2 231 -61 4 1776 285 359 82 76 chrX 156209733 156209855 -10440441 + B4A SINE B4 100 214 -78 4 1776 279 0 0 0 chrX 156209855 156209886 -10440410 + (CCAA)n Simple_repeat Simple_repeat 1 31 0 4 1776 285 359 82 76 chrX 156209886 156209947 -10440349 + B4A SINE B4 215 283 -9 4 1776 1079 263 81 23 chrX 156210914 156211175 -10439121 + B4 SINE B4 2 277 -15 4 1776 324 161 0 0 chrX 156211205 156211267 -10439029 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 1776 459 73 0 0 chrX 156211266 156211334 -10438962 + (GA)n Simple_repeat Simple_repeat 2 69 0 4 1776 1101 238 55 9 chrX 156211519 156211874 -10438422 + L1MB7 LINE L1 2692 3085 -3055 4 1776 869 178 14 0 chrX 156211874 156212020 -10438276 + B1_Mur3 SINE Alu 2 149 0 4 1776 1075 278 104 20 chrX 156212020 156212116 -10438180 + L1MB7 LINE L1 3086 3181 -2959 4 1776 667 225 7 66 chrX 156212140 156212292 -10438004 + ID_B1 SINE B4 82 224 0 4 1776 257 279 107 15 chrX 156212328 156212459 -10437837 + L1MB7 LINE L1 3221 3363 -2783 4 1776 1224 232 148 28 chrX 156212656 156212808 -10437488 + L1MB7 LINE L1 5666 5886 -298 4 1776 270 0 0 0 chrX 156212808 156212838 -10437458 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1776 1224 241 69 6 chrX 156212838 156213106 -10437190 + L1MB7 LINE L1 5887 6174 -10 4 1776 21 0 0 0 chrX 156213278 156213299 -10436997 + AT_rich Low_complexity Low_complexity 1 21 0 4 1776 287 285 63 24 chrX 156213532 156213658 -10436638 - L1M5 LINE L1 -374 5750 5620 4 1776 719 289 60 53 chrX 156214365 156214650 -10435646 + B4 SINE B4 6 292 0 4 1776 537 198 0 0 chrX 156214689 156214800 -10435496 + (TA)n Simple_repeat Simple_repeat 2 112 0 4 1776 559 220 8 56 chrX 156214851 156214976 -10435320 - PB1D9 SINE Alu 0 120 2 4 1776 428 296 41 38 chrX 156215369 156215636 -10434660 + Lx9 LINE L1 7325 7592 -52 4 1776 958 279 47 11 chrX 156216094 156216369 -10433927 - B4A SINE B4 -7 285 1 4 1776 1683 223 65 3 chrX 156216589 156216940 -10433356 - MTD LTR MaLR 0 419 47 4 1776 215 189 57 0 chrX 156217683 156217736 -10432560 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1776 7765 48 14 0 chrX 156218802 156219746 -10430550 + L1_Mus1 LINE L1 5611 6567 0 4 1776 855 130 81 0 chrX 156219767 156219890 -10430406 + B1_Mur4 SINE Alu 5 137 -13 4 1776 306 0 0 0 chrX 156219892 156219926 -10430370 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1776 567 258 149 12 chrX 156219929 156220090 -10430206 - B3A SINE B2 -15 183 1 4 1776 1409 258 74 24 chrX 156220913 156221374 -10428922 + L1MB3 LINE L1 5688 6171 -12 4 1776 2748 41 54 0 chrX 156221478 156221795 -10428501 - L1Md_F2 LINE L1 -12 6570 6237 4 1776 934 237 44 29 chrX 156221948 156222152 -10428144 - ID_B1 SINE B4 -6 218 12 4 1776 488 250 11 0 chrX 156222207 156222299 -10427997 + B4A SINE B4 1 93 -199 4 1776 2531 170 106 22 chrX 156222302 156222838 -10427458 + Lx9 LINE L1 7060 7640 -4 4 1776 244 217 129 110 chrX 156222834 156222989 -10427307 + RMER1C Other Other 1167 1324 -18 4 1776 541 239 86 32 chrX 156223029 156223215 -10427081 - MTEb LTR MaLR -183 196 1 4 1776 22 0 0 0 chrX 156225092 156225114 -10425182 + AT_rich Low_complexity Low_complexity 1 22 0 4 1776 358 261 9 26 chrX 156225183 156225297 -10424999 - L1M5 LINE L1 -326 5798 5687 4 1776 1459 232 144 3 chrX 156225309 156225664 -10424632 + MTD LTR MaLR 1 405 -14 4 1776 2536 68 0 80 chrX 156226265 156226627 -10423669 + L1Md_F2 LINE L1 6258 6582 0 4 1776 615 284 140 52 chrX 156226892 156227278 -10423018 - Charlie4a DNA MER1_type -44 464 45 4 1776 261 239 155 0 chrX 156227280 156227351 -10422945 - ID SINE ID -142 82 1 4 1776 373 288 29 43 chrX 156227409 156227547 -10422749 - RSINE1 SINE B4 -2 163 28 4 1776 1293 41 7 0 chrX 156227567 156227713 -10422583 - B1_Mm SINE Alu 0 147 1 4 1776 225 211 0 0 chrX 156227713 156227751 -10422545 - RSINE1 SINE B4 -122 43 6 4 1776 297 0 0 0 chrX 156227963 156227996 -10422300 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 4 1776 825 40 0 0 chrX 156228279 156228380 -10421916 + (TCC)n Simple_repeat Simple_repeat 2 102 0 4 1776 323 358 0 40 chrX 156229360 156229485 -10420811 + ID_B1 SINE B4 105 224 0 4 1776 996 256 5 0 chrX 156229636 156229827 -10420469 - ID_B1 SINE B4 -32 192 1 4 1776 1851 162 71 37 chrX 156230261 156230581 -10419715 - ORR1C1 LTR MaLR -14 364 32 4 1776 1551 74 5 0 chrX 156230581 156230771 -10419525 - B2_Mm1t SINE B2 -2 191 1 4 1776 1851 162 71 37 chrX 156230771 156230802 -10419494 - ORR1C1 LTR MaLR -347 31 1 4 1776 319 239 31 15 chrX 156230812 156231075 -10419221 + CT-rich Low_complexity Low_complexity 1 267 0 4 1776 2597 127 59 8 chrX 156231677 156232066 -10418230 - Lx4A LINE L1 -5 7053 6645 4 1776 458 300 27 41 chrX 156232341 156232487 -10417809 - B1_Mur1 SINE Alu -5 144 1 4 1776 188 115 146 55 chrX 156233441 156233496 -10416800 + MIRb SINE MIR 37 96 -172 4 1776 497 294 8 8 chrX 156234234 156234354 -10415942 + MER5B DNA MER1_type 10 129 -49 4 1776 403 291 113 35 chrX 156234458 156234714 -10415582 - L1MC4 LINE L1 -143 7899 7624 4 1776 1184 129 108 7 chrX 156234779 156235015 -10415281 - Lx7 LINE L1 -22 7674 7266 4 1776 258 100 16 32 chrX 156235042 156235104 -10415192 + (TC)n Simple_repeat Simple_repeat 2 62 0 4 1776 198 0 0 0 chrX 156235104 156235126 -10415170 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 1776 519 17 0 0 chrX 156235126 156235185 -10415111 + (GA)n Simple_repeat Simple_repeat 2 61 0 4 1776 436 284 63 14 chrX 156235468 156235675 -10414621 - L1MC4 LINE L1 -731 7311 7095 4 1776 245 231 0 30 chrX 156235920 156235987 -10414309 + MER5B DNA MER1_type 114 178 0 4 1776 182 244 190 13 chrX 156236076 156236155 -10414141 - MER5A DNA MER1_type -9 180 88 4 1776 188 103 51 0 chrX 156236230 156236269 -10414027 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 4 1776 30 0 0 0 chrX 156236823 156236853 -10413443 + AT_rich Low_complexity Low_complexity 1 30 0 4 1776 273 393 35 26 chrX 156237050 156237280 -10413016 + MIRb SINE MIR 37 268 0 4 1777 193 242 226 0 chrX 156238194 156238256 -10412040 + MIRc SINE MIR 71 146 -122 4 1777 374 247 13 0 chrX 156238335 156238412 -10411884 + B1_Mus1 SINE Alu 12 89 -59 4 1777 258 32 0 0 chrX 156238886 156238917 -10411379 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1777 233 226 237 25 chrX 156238972 156239090 -10411206 - Lx8 LINE L1 -1199 6274 6132 4 1777 608 296 45 0 chrX 156239587 156239719 -10410577 + RSINE1 SINE B4 14 151 -14 4 1777 474 272 26 0 chrX 156239961 156240075 -10410221 - PB1D10 SINE Alu 0 117 1 4 1777 546 16 0 0 chrX 156242349 156242412 -10407884 + (CAAAG)n Simple_repeat Simple_repeat 2 64 0 5 1777 242 300 0 0 chrX 156243521 156243601 -10406695 - LTR37B LTR ERV1 -188 280 201 5 1777 27 49 0 0 chrX 156243967 156244008 -10406288 + AT_rich Low_complexity Low_complexity 1 41 0 5 1777 856 206 14 0 chrX 156244011 156244157 -10406139 + B1_Mur1 SINE Alu 2 149 0 5 1777 263 286 59 59 chrX 156244257 156244376 -10405920 - PB1D7 SINE Alu 0 120 2 5 1777 1001 112 14 0 chrX 156245129 156245272 -10405024 + B2_Mm2 SINE B2 3 147 -48 5 1777 1126 200 43 24 chrX 156245833 156246043 -10404253 + B3 SINE B2 2 215 -1 5 1777 252 0 0 0 chrX 156246090 156246118 -10404178 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 5 1777 491 275 115 128 chrX 156246241 156246352 -10403944 - Tigger13a DNA MER2_type -83 688 606 5 1777 315 0 0 0 chrX 156246352 156246387 -10403909 + (TATG)n Simple_repeat Simple_repeat 4 38 0 5 1777 491 275 115 128 chrX 156246387 156246658 -10403638 - Tigger13a DNA MER2_type -166 605 311 5 1777 243 164 0 0 chrX 156247270 156247331 -10402965 + T-rich Low_complexity Low_complexity 1 61 0 5 1777 597 306 0 7 chrX 156248048 156248193 -10402103 + ID_B1 SINE B4 81 224 0 5 1777 1057 144 6 6 chrX 156248814 156248989 -10401307 - URR1A DNA MER1_type 0 226 52 5 1777 424 310 0 0 chrX 156249037 156249137 -10401159 - ID_B1 SINE B4 -46 178 79 5 1777 332 289 172 0 chrX 156249585 156249713 -10400583 + L1ME2 LINE L1 5919 6068 -96 5 1777 775 279 44 61 chrX 156249907 156250204 -10400092 - B4A SINE B4 0 292 1 5 1777 946 304 65 14 chrX 156251102 156251379 -10398917 - B4A SINE B4 0 292 2 5 1777 243 273 31 83 chrX 156251475 156251571 -10398725 - LTR84b LTR ERVL -598 163 73 5 1777 237 276 52 0 chrX 156251692 156251750 -10398546 + MIR3 SINE MIR 106 166 -42 5 1777 228 337 0 29 chrX 156253868 156253972 -10396324 - PB1D7 SINE Alu -19 101 1 5 1777 899 211 161 21 chrX 156253992 156254322 -10395974 - Charlie4a DNA MER1_type -70 438 63 5 1777 24 0 0 0 chrX 156254945 156254969 -10395327 + AT_rich Low_complexity Low_complexity 1 24 0 5 1777 255 61 0 0 chrX 156256015 156256048 -10394248 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 1777 364 222 16 93 chrX 156257311 156257440 -10392856 - L1MD2 LINE L1 -12 6347 6229 5 1777 298 197 297 19 chrX 156258288 156258443 -10391853 - L1MC5 LINE L1 -54 7907 7710 5 1777 355 263 142 41 chrX 156258523 156258741 -10391555 - L1MC5 LINE L1 -405 7556 7317 5 1777 369 0 0 0 chrX 156258744 156258785 -10391511 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1777 755 299 14 23 chrX 156259558 156259774 -10390522 + ID_B1 SINE B4 2 215 -9 5 1777 477 219 100 9 chrX 156260791 156260913 -10389383 - B1F SINE Alu -6 143 12 5 1777 180 176 0 0 chrX 156261387 156261421 -10388875 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1777 216 0 0 0 chrX 156261647 156261671 -10388625 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1777 310 309 13 18 chrX 156261761 156261787 -10388509 - ID4 SINE ID -41 111 35 5 1777 222 254 40 53 chrX 156261787 156261862 -10388434 - B4A SINE B4 -204 88 15 5 1777 223 277 31 0 chrX 156262329 156262394 -10387902 + CT-rich Low_complexity Low_complexity 2 68 0 5 1777 319 290 36 64 chrX 156263431 156263571 -10386725 - Charlie10 DNA MER1_type -2670 152 17 5 1777 1173 42 35 7 chrX 156263797 156263940 -10386356 + B1_Mm SINE Alu 1 147 0 5 1777 189 0 0 0 chrX 156263940 156263961 -10386335 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1777 620 162 0 35 chrX 156264273 156264563 -10385733 + (TGG)n Simple_repeat Simple_repeat 1 279 0 5 1777 233 302 91 23 chrX 156266806 156266894 -10383402 - ORR1E LTR MaLR -226 133 40 5 1777 547 320 54 29 chrX 156268191 156268468 -10381828 - B4A SINE B4 -8 284 1 5 1777 196 271 0 17 chrX 156268681 156268741 -10381555 + L2 LINE L2 2477 2535 -884 5 1777 551 201 0 7 chrX 156269726 156269866 -10380430 + CT-rich Low_complexity Low_complexity 2 140 0 5 1777 1075 300 18 7 chrX 156269894 156270173 -10380123 - B4A SINE B4 -10 282 1 5 1777 369 301 45 0 chrX 156270260 156270383 -10379913 + B1F1 SINE Alu 1 127 -20 5 1777 338 299 69 0 chrX 156270557 156270644 -10379652 - ID_B1 SINE B4 -72 152 60 5 1777 257 125 0 0 chrX 156270785 156270825 -10379471 + B3A SINE B2 1 40 -158 5 1777 192 77 0 0 chrX 156271209 156271235 -10379061 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 1777 515 288 32 8 chrX 156271549 156271693 -10378603 + B1F1 SINE Alu 1 148 -1 5 1777 641 296 7 0 chrX 156271735 156271877 -10378419 + RSINE1 SINE B4 2 144 -21 5 1777 249 108 0 0 chrX 156271880 156271917 -10378379 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 1777 348 24 0 0 chrX 156271917 156271958 -10378338 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1777 2114 187 16 0 chrX 156272025 156272389 -10377907 - ORR1D1 LTR MaLR -4 370 1 5 1777 782 221 29 95 chrX 156272740 156272950 -10377346 - B3A SINE B2 -1 197 2 5 1777 541 309 13 0 chrX 156273128 156273277 -10377019 + ID_B1 SINE B4 36 186 -38 5 1777 285 29 0 0 chrX 156273283 156273317 -10376979 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1777 342 356 114 0 chrX 156273333 156273535 -10376761 + MIR SINE MIR 38 262 0 5 1777 562 289 14 14 chrX 156273625 156273769 -10376527 - B1_Mur1 SINE Alu -5 144 1 5 1777 926 271 64 0 chrX 156273769 156273984 -10376312 - B4A SINE B4 -61 231 3 5 1777 226 317 22 109 chrX 156274099 156274237 -10376059 + L2a LINE L2 3300 3425 -1 5 1777 912 172 158 20 chrX 156274478 156274674 -10375622 + URR1A DNA MER1_type 1 223 -3 5 1777 630 270 0 0 chrX 156274879 156275016 -10375280 - ID_B1 SINE B4 -4 220 84 5 1777 561 245 46 2 chrX 156275866 156276001 -10374295 - B1F1 SINE Alu -2 147 6 5 1777 236 338 24 48 chrX 156275927 156276011 -10374285 - B4A SINE B4 -125 167 86 5 1777 564 285 14 14 chrX 156276041 156276187 -10374109 - ID_B1 SINE B4 -9 215 70 5 1777 1280 264 170 56 chrX 156276198 156276411 -10373885 - L1MC3 LINE L1 0 7785 7580 5 1777 1940 94 28 18 chrX 156276411 156276693 -10373603 - L1Md_F2 LINE L1 -10 6572 6288 5 1777 1280 264 170 56 chrX 156276693 156277145 -10373151 - L1MC3 LINE L1 -206 7579 7044 5 1777 247 233 0 0 chrX 156277632 156277675 -10372621 - ID4_ SINE ID -1 82 40 5 1777 288 351 52 22 chrX 156277683 156277817 -10372479 - MIR SINE MIR -112 150 13 5 1777 21 0 0 0 chrX 156277980 156278001 -10372295 + AT_rich Low_complexity Low_complexity 1 21 0 5 1777 398 53 0 17 chrX 156278134 156278192 -10372104 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1777 670 128 9 0 chrX 156280420 156280529 -10369767 - B1_Mus1 SINE Alu -4 144 35 5 1777 236 218 74 37 chrX 156280460 156280541 -10369755 - RLTR25B LTR ERVK -526 502 419 5 1777 641 241 68 0 chrX 156280750 156280883 -10369413 + B1F SINE Alu 7 148 -1 5 1777 5604 68 7 6 chrX 156280979 156281665 -10368631 - L1_Mus1 LINE L1 0 6567 5881 5 1777 710 248 0 26 chrX 156281863 156282016 -10368280 + B1F2 SINE Alu 1 149 0 5 1777 481 291 11 47 chrX 156282205 156282396 -10367900 - L1M3 LINE L1 -554 5629 5446 5 1777 205 182 0 0 chrX 156283094 156283127 -10367169 + polypurine Low_complexity Low_complexity 4 36 0 5 1777 1055 193 68 19 chrX 156284453 156284659 -10365637 - B3 SINE B2 0 216 1 5 1777 479 219 195 0 chrX 156285278 156285401 -10364895 + ID_B1 SINE B4 78 224 0 5 1777 628 250 43 22 chrX 156285401 156285540 -10364756 + B1_Mur1 SINE Alu 8 149 0 5 1777 811 262 87 16 chrX 156285954 156286149 -10364147 + B4A SINE B4 1 211 -81 5 1777 4092 31 0 0 chrX 156286149 156286598 -10363698 + L1Md_F2 LINE L1 6134 6582 0 5 1777 818 171 0 70 chrX 156286602 156286759 -10363537 + B1_Mus2 SINE Alu 1 146 -1 5 1777 811 262 87 16 chrX 156286759 156286810 -10363486 + B4A SINE B4 212 266 -26 5 1777 440 356 64 87 chrX 156286919 156287160 -10363136 + B4A SINE B4 1 231 -61 5 1777 1077 97 148 0 chrX 156287160 156287315 -10362981 + B2_Mm1t SINE B2 2 179 -14 5 1777 307 395 41 87 chrX 156287315 156287339 -10362957 + B4 SINE B4 232 254 -38 5 1777 448 71 9 0 chrX 156287377 156287441 -10362855 + B2_Mm2 SINE B2 47 114 -102 5 1777 27 29 0 0 chrX 156287448 156287482 -10362814 + AT_rich Low_complexity Low_complexity 1 34 0 5 1777 244 318 48 0 chrX 156287494 156287557 -10362739 + B4A SINE B4 223 288 -4 5 1777 282 73 0 0 chrX 156287760 156287801 -10362495 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 5 1777 1218 43 0 0 chrX 156287801 156287939 -10362357 - B1_Mus1 SINE Alu -10 138 1 5 1777 957 189 194 0 chrX 156288039 156288219 -10362077 - B3 SINE B2 0 216 2 5 1777 839 216 42 74 chrX 156288345 156288560 -10361736 - B3 SINE B2 0 216 9 5 1777 245 326 0 10 chrX 156289055 156289151 -10361145 - L1ME4a LINE L1 -60 6064 5970 5 1777 1351 74 68 0 chrX 156289159 156289335 -10360961 - B2_Mm2 SINE B2 -6 189 2 5 1777 27 0 0 0 chrX 156289395 156289422 -10360874 + AT_rich Low_complexity Low_complexity 1 27 0 5 1777 234 288 0 149 chrX 156289532 156289626 -10360670 - ID4_ SINE ID -3 80 1 5 1777 1072 130 0 27 chrX 156289665 156289815 -10360481 + B1_Mur4 SINE Alu 1 146 -4 5 1777 590 0 0 14 chrX 156289817 156289888 -10360408 + (GAAA)n Simple_repeat Simple_repeat 2 71 0 5 1777 432 262 98 45 chrX 156289949 156290081 -10360215 - RSINE1 SINE B4 0 165 27 5 1777 647 244 24 66 chrX 156290326 156290493 -10359803 - RSINE1 SINE B4 -4 161 2 5 1777 406 348 34 52 chrX 156291321 156291592 -10358704 - B4A SINE B4 0 292 11 5 1777 388 279 65 22 chrX 156291633 156291772 -10358524 - MIR SINE MIR -49 213 69 5 1777 1208 180 23 28 chrX 156292263 156292480 -10357816 - B3 SINE B2 0 216 1 6 1777 460 326 107 28 chrX 156292497 156292515 -10357781 - B3A SINE B2 -7 191 175 6 1777 315 0 0 0 chrX 156292515 156292550 -10357746 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1777 460 326 107 28 chrX 156292550 156292708 -10357588 - B3A SINE B2 -24 174 1 6 1777 251 349 19 9 chrX 156292708 156292812 -10357484 - ID_B1 SINE B4 -34 190 86 6 1777 1014 281 40 7 chrX 156293020 156293296 -10357000 - B4 SINE B4 -6 286 2 6 1777 455 248 128 20 chrX 156293699 156293847 -10356449 - MER2 DNA MER2_type -170 175 12 6 1777 450 0 0 0 chrX 156293856 156293906 -10356390 + (TCCC)n Simple_repeat Simple_repeat 2 51 0 6 1777 396 244 79 2 chrX 156293927 156294056 -10356240 - L1MB1 LINE L1 -271 5897 5761 6 1777 242 167 0 0 chrX 156294962 156294998 -10355298 - PB1 SINE Alu -56 71 36 6 1777 441 36 0 0 chrX 156296353 156296408 -10353888 + (TC)n Simple_repeat Simple_repeat 1 55 0 6 1777 419 216 9 0 chrX 156296408 156296524 -10353772 + (CA)n Simple_repeat Simple_repeat 2 118 0 6 1777 351 0 0 0 chrX 156297881 156297920 -10352376 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 6 1777 617 200 0 25 chrX 156297920 156298038 -10352258 - PB1D10 SINE Alu 0 117 3 6 1777 704 308 31 0 chrX 156299558 156299753 -10350543 - B3 SINE B2 -14 202 2 6 1777 823 269 33 14 chrX 156299778 156299989 -10350307 - B3 SINE B2 -1 215 1 6 1777 534 291 7 0 chrX 156300782 156300930 -10349366 - MER5A DNA MER1_type 0 189 41 6 1777 399 183 0 0 chrX 156302440 156302522 -10347774 + (TG)n Simple_repeat Simple_repeat 2 83 0 6 1777 451 206 29 135 chrX 156303680 156303710 -10346586 - B2_Mm1a SINE B2 -5 188 163 6 1777 186 43 0 0 chrX 156303710 156303733 -10346563 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1777 755 206 29 135 chrX 156303733 156303910 -10346386 - B3A SINE B2 -30 168 3 6 1777 582 286 111 27 chrX 156304038 156304336 -10345960 - MER33 DNA MER1_type 0 324 2 6 1777 1061 278 141 20 chrX 156304366 156304770 -10345526 - RMER5 LTR ERV1 -10 524 72 6 1777 1540 122 18 22 chrX 156306161 156306388 -10343908 + URR1A DNA MER1_type 1 226 0 6 1777 186 43 0 0 chrX 156306723 156306746 -10343550 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 1777 660 280 12 19 chrX 156307385 156307545 -10342751 - MER20 DNA MER1_type -33 186 28 6 1777 922 285 9 9 chrX 156307700 156307916 -10342380 + ID_B1 SINE B4 1 216 -8 6 1777 736 333 19 109 chrX 156307918 156308238 -10342058 + B4A SINE B4 2 292 0 6 1777 393 317 35 30 chrX 156308269 156308438 -10341858 - MLT1A1 LTR MaLR -220 188 19 6 1777 401 228 130 85 chrX 156308731 156308908 -10341388 + MER5A DNA MER1_type 1 185 -4 6 1777 254 306 133 39 chrX 156309379 156309634 -10340662 + MER46C DNA MER2_type 13 291 -47 6 1777 441 0 0 0 chrX 156309738 156309787 -10340509 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1777 840 304 23 60 chrX 156309816 156310117 -10340179 - B4A SINE B4 0 292 3 6 1777 21 0 0 0 chrX 156310385 156310406 -10339890 + AT_rich Low_complexity Low_complexity 1 21 0 6 1777 510 301 13 53 chrX 156310642 156310793 -10339503 + ID_B1 SINE B4 80 224 0 6 1777 463 300 12 75 chrX 156310794 156310945 -10339351 + RSINE1 SINE B4 4 151 -14 6 1777 231 114 0 0 chrX 156310945 156310980 -10339316 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 1777 463 300 12 75 chrX 156310980 156311001 -10339295 + RSINE1 SINE B4 152 165 0 6 1777 217 336 0 110 chrX 156311710 156311837 -10338459 + L2a LINE L2 3300 3412 -14 6 1777 1087 152 45 10 chrX 156312561 156312760 -10337536 - ORR1B1 LTR MaLR -188 206 1 6 1777 4842 241 47 12 chrX 156312858 156313998 -10336298 - Lx7 LINE L1 -376 7320 6141 6 1777 255 313 0 0 chrX 156314021 156314088 -10336208 + ID4 SINE ID 17 83 0 6 1777 327 237 132 0 chrX 156314232 156314308 -10335988 + 5S rRNA rRNA 1 86 -35 6 1777 966 229 69 82 chrX 156315235 156315554 -10334742 + Lx6 LINE L1 7082 7396 -64 6 1777 457 273 45 18 chrX 156316229 156316341 -10333955 - PB1D10 SINE Alu 0 117 3 6 1777 322 385 6 11 chrX 156319001 156319177 -10331119 + MIRb SINE MIR 32 206 -62 6 1777 382 106 23 23 chrX 156320186 156320273 -10330023 + (TCTCTG)n Simple_repeat Simple_repeat 2 88 0 6 1777 818 172 0 22 chrX 156320286 156320423 -10329873 - B1_Mur4 SINE Alu -16 134 1 6 1777 430 298 0 72 chrX 156320426 156320578 -10329718 - ID_B1 SINE B4 -5 219 79 6 1777 255 268 57 28 chrX 156321134 156321222 -10329074 - L2b LINE L2 0 3387 3294 6 1777 234 346 55 25 chrX 156321510 156321685 -10328611 - MIR SINE MIR -64 204 23 6 1777 742 320 142 28 chrX 156322013 156322479 -10327817 - Lx8 LINE L1 -2 7471 6953 6 1777 2184 128 35 14 chrX 156322501 156322849 -10327447 + RLTR15 LTR ERVK 5 359 0 6 1777 341 233 44 0 chrX 156322852 156322942 -10327354 + Lx8 LINE L1 6103 6196 -1277 6 1777 201 163 0 0 chrX 156322971 156323020 -10327276 + (CAGAGA)n Simple_repeat Simple_repeat 6 54 0 6 1777 927 261 58 0 chrX 156323092 156323299 -10326997 - ID_B1 SINE B4 -5 219 1 6 1777 541 332 10 10 chrX 156324487 156324682 -10325614 - B3A SINE B2 -2 196 2 6 1777 770 188 0 0 chrX 156324787 156324915 -10325381 - RSINE1 SINE B4 -22 143 16 6 1777 446 250 29 59 chrX 156324940 156325076 -10325220 + MIR SINE MIR 65 196 -66 6 1777 437 239 79 9 chrX 156325085 156325199 -10325097 + MLT1A1 LTR MaLR 1 122 -286 6 1777 257 321 53 9 chrX 156325345 156325458 -10324838 + MLT1A1 LTR MaLR 248 365 0 6 1777 196 242 46 46 chrX 156325458 156325523 -10324773 + MIR SINE MIR 198 262 0 6 1777 1176 188 159 30 chrX 156326143 156326444 -10323852 - MER58B DNA MER1_type -1 340 1 6 1777 864 228 6 6 chrX 156326530 156326693 -10323603 + RSINE1 SINE B4 3 165 0 6 1777 258 288 143 9 chrX 156326730 156326842 -10323454 + L1MD LINE L1 4901 5027 -1119 6 1777 22 0 0 0 chrX 156327935 156327957 -10322339 + AT_rich Low_complexity Low_complexity 1 22 0 6 1777 24 0 0 0 chrX 156328189 156328213 -10322083 + AT_rich Low_complexity Low_complexity 1 24 0 6 1777 712 250 109 106 chrX 156328243 156328592 -10321704 + RMER10A LTR ERVL 80 429 -13 6 1777 1299 152 36 27 chrX 156328865 156329088 -10321208 + URR1B DNA MER1_type 1 225 0 6 1777 232 386 66 47 chrX 156329165 156329377 -10320919 - Charlie17a DNA MER1_type -1 218 3 6 1777 6995 48 0 2 chrX 156330346 156331193 -10319103 + L1Md_F2 LINE L1 4742 5586 -297 6 1777 8510 47 13 1 chrX 156331194 156332177 -10318119 + L1Md_F2 LINE L1 5588 6582 0 6 1777 615 303 122 15 chrX 156333294 156333622 -10316674 - Lx9 LINE L1 -217 7427 7065 6 1777 180 111 0 0 chrX 156333623 156333650 -10316646 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 1777 234 218 152 18 chrX 156333650 156333762 -10316534 + Lx9 LINE L1 7499 7625 -19 6 1777 422 90 0 29 chrX 156333955 156334024 -10316272 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 6 1777 252 238 150 0 chrX 156334263 156334343 -10315953 - MER5B DNA MER1_type -83 95 4 6 1777 652 260 97 15 chrX 156334874 156335069 -10315227 + ID_B1 SINE B4 4 214 -10 6 1777 225 195 0 0 chrX 156335718 156335759 -10314537 + RMER30 DNA MER1_type 11 51 -151 6 1777 198 0 0 0 chrX 156336295 156336317 -10313979 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 6 1777 368 277 35 35 chrX 156339148 156339264 -10311032 + PB1D10 SINE Alu 1 116 -1 6 1777 281 320 0 0 chrX 156339436 156339514 -10310782 + ID4 SINE ID 2 79 -4 6 1777 448 234 9 0 chrX 156340467 156340574 -10309722 - MTEa LTR MaLR 0 379 272 6 1777 452 181 48 0 chrX 156340608 156340691 -10309605 - MTEa LTR MaLR -292 87 1 6 1777 365 194 0 14 chrX 156340828 156340901 -10309395 - MER5A1 DNA MER1_type -94 72 1 6 1777 345 319 228 4 chrX 156341864 156342119 -10308177 + MER2 DNA MER2_type 27 338 -7 6 1777 291 222 0 14 chrX 156342125 156342198 -10308098 - L1MA8 LINE L1 -63 6228 6157 6 1777 180 0 0 0 chrX 156343895 156343915 -10306381 + (CAA)n Simple_repeat Simple_repeat 3 22 0 6 1777 860 275 43 0 chrX 156344128 156344339 -10305957 + ID_B1 SINE B4 1 220 -4 6 1777 400 329 104 17 chrX 156344350 156344523 -10305773 + B4A SINE B4 85 272 -20 6 1777 192 200 0 0 chrX 156344604 156344644 -10305652 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 6 1777 2591 83 3 0 chrX 156345168 156345507 -10304789 - L1_Mus2 LINE L1 -1 6565 6226 6 1777 2600 76 17 9 chrX 156345507 156345853 -10304443 + L1_Mus2 LINE L1 5898 6246 -320 6 1777 240 188 0 0 chrX 156346872 156346920 -10303376 - Lx6 LINE L1 -40 7420 7373 6 1777 550 113 10 10 chrX 156346956 156347054 -10303242 + (TTTCC)n Simple_repeat Simple_repeat 3 100 0 6 1777 1153 76 0 0 chrX 156347057 156347202 -10303094 - B1_Mm SINE Alu 0 147 3 6 1777 260 250 82 10 chrX 156347382 156347479 -10302817 + MLT1A1 LTR MaLR 305 408 0 6 1777 343 70 42 0 chrX 156348595 156348666 -10301630 + Lx9 LINE L1 7549 7622 -22 6 1777 381 248 216 8 chrX 156349227 156349294 -10301002 + RSINE1 SINE B4 3 89 -76 6 1777 435 19 0 0 chrX 156349294 156349346 -10300950 + (GA)n Simple_repeat Simple_repeat 1 52 0 6 1777 381 248 216 8 chrX 156349346 156349412 -10300884 + RSINE1 SINE B4 90 162 -3 6 1777 229 239 117 21 chrX 156350187 156350281 -10300015 + MIRb SINE MIR 78 180 -88 6 1777 905 75 14 0 chrX 156351412 156351559 -10298737 - Lx LINE L1 -4 6650 6502 6 1777 602 347 117 31 chrX 156354095 156354550 -10295746 - MLT1G LTR MaLR 0 595 102 6 1777 22 0 0 0 chrX 156354786 156354808 -10295488 + AT_rich Low_complexity Low_complexity 1 22 0 6 1777 378 0 0 0 chrX 156356937 156356979 -10293317 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 1777 441 0 0 0 chrX 156357543 156357592 -10292704 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1777 832 270 79 16 chrX 156358854 156359170 -10291126 - L1MB2 LINE L1 0 6171 5836 6 1777 693 76 0 0 chrX 156360030 156360135 -10290161 + (TCTCTG)n Simple_repeat Simple_repeat 2 106 0 6 1777 210 26 50 25 chrX 156360135 156360174 -10290122 + (TA)n Simple_repeat Simple_repeat 2 42 0 7 1777 335 304 116 0 chrX 156360370 156360482 -10289814 - MER5A DNA MER1_type -2 187 63 7 1777 774 256 38 9 chrX 156360530 156360743 -10289553 - ID_B1 SINE B4 -1 223 5 7 1777 294 257 0 13 chrX 156360748 156360823 -10289473 - MER5A DNA MER1_type -115 74 1 7 1777 186 43 0 0 chrX 156361289 156361312 -10288984 + (TAA)n Simple_repeat Simple_repeat 2 24 0 7 1777 263 319 43 21 chrX 156362077 156362170 -10288126 + PB1D9 SINE Alu 9 103 -17 7 1777 243 79 0 0 chrX 156362439 156362477 -10287819 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 1777 861 256 48 91 chrX 156363679 156364053 -10286243 - ORR1E LTR MaLR -1 358 1 7 1777 1323 227 103 12 chrX 156364717 156365056 -10285240 + MTD LTR MaLR 1 370 -49 7 1777 778 222 70 15 chrX 156365080 156365281 -10285015 - B3 SINE B2 0 216 5 7 1777 840 151 0 0 chrX 156365682 156365828 -10284468 + CT-rich Low_complexity Low_complexity 1 146 0 7 1777 1666 216 83 5 chrX 156367065 156367451 -10282845 - MTD LTR MaLR 0 419 4 7 1777 400 188 50 0 chrX 156368370 156368450 -10281846 + ID_B1 SINE B4 137 220 -4 7 1777 242 338 49 41 chrX 156368488 156368632 -10281664 + MIR SINE MIR 28 180 -96 7 1777 371 308 457 10 chrX 156368695 156368892 -10281404 - LTR16A LTR ERVL -108 343 59 7 1778 1467 279 85 4 chrX 156369253 156369710 -10280586 - Lx8 LINE L1 -28 7445 6952 7 1778 279 307 0 11 chrX 156370755 156370844 -10279452 - MLT1B LTR MaLR 0 390 303 7 1778 595 318 7 9 chrX 156370889 156371102 -10279194 + B3A SINE B2 2 216 0 7 1778 187 182 0 0 chrX 156371681 156371714 -10278582 - MIR SINE MIR -149 113 81 7 1778 842 229 69 15 chrX 156371960 156372164 -10278132 - B3 SINE B2 0 216 2 7 1778 686 250 50 50 chrX 156372197 156372395 -10277901 + B3A SINE B2 1 198 0 7 1778 1212 54 0 0 chrX 156372611 156372758 -10277538 + B1_Mm SINE Alu 1 147 0 7 1778 213 39 0 0 chrX 156372758 156372784 -10277512 + (A)n Simple_repeat Simple_repeat 1 26 0 7 1778 1249 265 58 11 chrX 156373370 156373748 -10276548 + L1MA7 LINE L1 5882 6277 -14 7 1778 766 301 27 75 chrX 156374068 156374263 -10276033 + B4A SINE B4 13 213 -79 7 1778 622 195 0 26 chrX 156374263 156374379 -10275917 + PB1D9 SINE Alu 5 117 -3 7 1778 766 301 27 75 chrX 156374379 156374477 -10275819 + B4A SINE B4 214 292 0 7 1778 354 267 60 65 chrX 156374920 156375104 -10275192 - MER2 DNA MER2_type -27 318 136 7 1778 8235 102 33 20 chrX 156375114 156377350 -10272946 - Lx3C LINE L1 0 6976 4747 7 1778 1333 173 97 10 chrX 156377348 156377657 -10272639 - Lx3C LINE L1 -693 6283 5948 7 1778 550 295 26 93 chrX 156377730 156377924 -10272372 - B3A SINE B2 0 216 36 7 1778 730 297 73 25 chrX 156378074 156378388 -10271908 - L1MA5 LINE L1 -5 6295 5967 7 1778 1051 113 11 11 chrX 156378395 156378574 -10271722 + (TTTCC)n Simple_repeat Simple_repeat 2 180 0 7 1778 237 65 0 0 chrX 156378574 156378605 -10271691 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 7 1778 272 299 56 106 chrX 156378646 156378788 -10271508 - RSINE1 SINE B4 -29 136 2 7 1778 29 22 0 21 chrX 156378837 156378863 -10271433 + AT_rich Low_complexity Low_complexity 1 26 0 7 1778 320 77 19 0 chrX 156378863 156378915 -10271381 - Lx4A LINE L1 -3 7055 7003 7 1778 29 22 0 21 chrX 156378915 156378935 -10271361 + AT_rich Low_complexity Low_complexity 1 20 0 7 1778 573 251 36 1 chrX 156379001 156379181 -10271115 - L1MA5 LINE L1 -681 5493 5306 7 1778 252 100 0 0 chrX 156379695 156379735 -10270561 + (GAAA)n Simple_repeat Simple_repeat 2 41 0 7 1778 434 298 19 22 chrX 156379824 156380010 -10270286 + Lx8 LINE L1 7149 7466 -178 7 1778 192 40 0 0 chrX 156381432 156381457 -10268839 + (TTG)n Simple_repeat Simple_repeat 3 27 0 7 1778 458 234 119 31 chrX 156382075 156382234 -10268062 - L1MD2 LINE L1 -151 6208 6036 7 1778 417 54 0 0 chrX 156382285 156382341 -10267955 + (T)n Simple_repeat Simple_repeat 1 56 0 7 1778 951 255 57 91 chrX 156382377 156382761 -10267535 - MTE2a LTR MaLR -8 371 1 7 1778 244 265 88 0 chrX 156382829 156382897 -10267399 - PB1D10 SINE Alu -43 74 1 7 1778 228 271 86 0 chrX 156382897 156382967 -10267329 - L1MD2 LINE L1 -317 6042 5967 7 1778 1751 16 0 0 chrX 156383072 156383265 -10267031 + B2_Mm1a SINE B2 1 193 0 7 1778 207 0 0 0 chrX 156383330 156383353 -10266943 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 7 1778 183 88 147 0 chrX 156385598 156385632 -10264664 + L3 LINE CR1 4293 4331 -158 7 1778 29 0 0 0 chrX 156385717 156385746 -10264550 + AT_rich Low_complexity Low_complexity 1 29 0 7 1778 327 252 65 0 chrX 156386626 156386733 -10263563 + L1MB8 LINE L1 6065 6178 0 7 1778 818 231 55 95 chrX 156386786 156387039 -10263257 + B4 SINE B4 50 292 0 7 1778 311 336 39 39 chrX 156387710 156387837 -10262459 + MER20 DNA MER1_type 33 159 -60 7 1778 243 157 0 0 chrX 156388167 156388218 -10262078 + GA-rich Low_complexity Low_complexity 1 51 0 7 1778 323 198 9 47 chrX 156389624 156389730 -10260566 - Lx4B LINE L1 -4 7054 6953 7 1778 668 165 0 55 chrX 156389715 156389824 -10260472 + Lx5 LINE L1 6233 6335 -715 7 1778 293 316 0 0 chrX 156390936 156391012 -10259284 + CT-rich Low_complexity Low_complexity 4 79 0 7 1778 180 284 85 12 chrX 156391049 156391131 -10259165 - L2a LINE L2 -9 3417 3330 7 1778 359 309 51 26 chrX 156392866 156393022 -10257274 - RMER15 LTR ERVL -52 523 364 7 1778 445 214 87 0 chrX 156393642 156393745 -10256551 + B4A SINE B4 125 236 -56 7 1778 303 319 152 0 chrX 156396980 156397184 -10253112 - L1ME4a LINE L1 -189 5935 5701 7 1778 1012 70 0 0 chrX 156399984 156400127 -10250169 + B1_Mus1 SINE Alu 6 148 0 7 1778 25 31 0 0 chrX 156400375 156400407 -10249889 + AT_rich Low_complexity Low_complexity 1 32 0 7 1778 279 330 42 67 chrX 156400554 156400674 -10249622 + PB1 SINE Alu 9 125 -2 7 1778 252 260 47 16 chrX 156400674 156400803 -10249493 + (CAGAGA)n Simple_repeat Simple_repeat 2 134 0 7 1778 273 250 44 0 chrX 156400834 156400902 -10249394 + ID4 SINE ID 12 82 -1 7 1778 286 154 13 13 chrX 156403149 156403228 -10247068 + CT-rich Low_complexity Low_complexity 2 80 0 7 1778 405 0 0 0 chrX 156404628 156404673 -10245623 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1778 504 0 0 0 chrX 156404832 156404888 -10245408 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 1778 506 250 51 8 chrX 156404894 156405011 -10245285 - RSINE1 SINE B4 -38 127 6 7 1778 770 253 0 12 chrX 156405068 156405236 -10245060 + B3 SINE B2 2 167 -49 7 1778 183 129 0 0 chrX 156405236 156405267 -10245029 + (CATA)n Simple_repeat Simple_repeat 4 34 0 7 1778 512 319 42 12 chrX 156405611 156405776 -10244520 - B3A SINE B2 -28 170 1 7 1778 266 354 57 64 chrX 156405786 156405943 -10244353 + MamRep137 DNA TcMar? 150 305 -139 7 1778 243 301 146 7 chrX 156406452 156406596 -10243700 + MER103 DNA DNA 3 166 0 7 1778 1463 55 39 0 chrX 156408017 156408199 -10242097 - B2_Mm1t SINE B2 -3 190 2 7 1778 953 269 81 11 chrX 156408333 156408604 -10241692 + B4A SINE B4 1 290 -2 7 1778 1413 182 114 53 chrX 156408995 156409390 -10240906 - MTD LTR MaLR 0 419 1 7 1778 314 202 23 81 chrX 156409412 156409498 -10240798 + RSINE1 SINE B4 50 130 -35 7 1778 207 161 0 0 chrX 156409541 156409572 -10240724 + polypurine Low_complexity Low_complexity 3 33 0 7 1778 753 12 0 0 chrX 156409577 156409663 -10240633 + (GGA)n Simple_repeat Simple_repeat 2 87 0 7 1778 440 250 22 7 chrX 156409949 156410086 -10240210 + B1F SINE Alu 5 143 -6 7 1778 702 0 0 0 chrX 156410324 156410402 -10239894 + (CTG)n Simple_repeat Simple_repeat 1 78 0 7 1778 22 0 0 0 chrX 156412070 156412092 -10238204 + AT_rich Low_complexity Low_complexity 1 22 0 7 1778 330 132 0 0 chrX 156412137 156412190 -10238106 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 1778 2439 54 0 0 chrX 156414634 156414930 -10235366 - L1_Mus1 LINE L1 -2 6565 6270 7 1778 21 0 0 0 chrX 156415061 156415082 -10235214 + AT_rich Low_complexity Low_complexity 1 21 0 7 1778 252 331 7 43 chrX 156417140 156417279 -10233017 - L2c LINE L2 -3 3384 3251 7 1778 930 194 31 0 chrX 156417341 156417537 -10232759 + URR1A DNA MER1_type 1 202 -24 7 1778 596 297 66 40 chrX 156418172 156418400 -10231896 + B4A SINE B4 1 234 -58 7 1778 189 107 0 0 chrX 156418414 156418442 -10231854 + (GGGAGA)n Simple_repeat Simple_repeat 1 28 0 7 1778 660 304 40 0 chrX 156418508 156418735 -10231561 + L1MD2 LINE L1 847 1082 -4963 7 1778 288 315 180 67 chrX 156418769 156418963 -10231333 + ID_B1 SINE B4 5 220 -4 7 1778 312 248 130 7 chrX 156418987 156419125 -10231171 + L1MD2 LINE L1 1177 1331 -5420 7 1778 1248 263 121 11 chrX 156419149 156419669 -10230627 + L1MD2 LINE L1 3684 4260 -2304 7 1778 941 223 10 10 chrX 156419679 156419887 -10230409 + B3 SINE B2 9 216 0 7 1778 1032 189 5 0 chrX 156419890 156420081 -10230215 + B3 SINE B2 1 192 -24 7 1778 1789 233 46 33 chrX 156420156 156420609 -10229687 + Lx9 LINE L1 6957 7415 -229 7 1778 387 0 0 0 chrX 156420612 156420655 -10229641 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1778 468 0 0 0 chrX 156420655 156420706 -10229590 + (GA)n Simple_repeat Simple_repeat 2 53 0 7 1778 1795 229 45 43 chrX 156420742 156421047 -10229249 + L1MD2 LINE L1 5260 5565 -999 7 1778 2551 201 48 21 chrX 156421047 156421607 -10228689 - RMER15 LTR ERVL 0 575 1 7 1778 1795 229 45 43 chrX 156421607 156421845 -10228451 + L1MD2 LINE L1 5566 5797 -767 7 1778 432 0 0 0 chrX 156421845 156421893 -10228403 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 1778 1795 195 105 24 chrX 156421893 156421980 -10228316 + L1MD2 LINE L1 5798 5898 -762 7 1778 1770 234 89 13 chrX 156422009 156422534 -10227762 + Lx9 LINE L1 7065 7629 -15 7 1778 1199 248 79 65 chrX 156422570 156423066 -10227230 + L1MD2 LINE L1 5846 6348 -429 7 1778 475 305 53 8 chrX 156423066 156423198 -10227098 - ID_B1 SINE B4 -6 218 81 7 1778 975 234 84 13 chrX 156423198 156423497 -10226799 + L1MD2 LINE L1 6341 6660 0 7 1778 206 324 90 0 chrX 156423521 156423632 -10226664 + L3 LINE CR1 4021 4141 -348 7 1778 537 247 71 47 chrX 156424525 156424695 -10225601 + B4 SINE B4 118 291 -1 8 1778 1029 262 56 14 chrX 156424706 156425066 -10225230 + L1MB8 LINE L1 5304 5678 -500 8 1778 251 272 103 91 chrX 156425068 156425331 -10224965 + L1MB8 LINE L1 5912 6177 -1 8 1778 555 147 0 0 chrX 156425812 156425914 -10224382 + (GGAA)n Simple_repeat Simple_repeat 4 105 0 8 1778 240 35 0 0 chrX 156426370 156426399 -10223897 + (CGG)n Simple_repeat Simple_repeat 2 30 0 8 1778 29 101 0 0 chrX 156426453 156426552 -10223744 + GC_rich Low_complexity Low_complexity 1 99 0 8 1778 24 32 0 0 chrX 156426595 156426626 -10223670 + GC_rich Low_complexity Low_complexity 1 31 0 8 1778 647 130 83 8 chrX 156427033 156427165 -10223131 + URR1A DNA MER1_type 83 224 -2 8 1778 243 254 14 27 chrX 156427272 156427345 -10222951 + MT2B LTR ERVL 173 244 -357 8 1778 464 171 106 18 chrX 156427289 156427402 -10222894 + B1F SINE Alu 26 148 -1 8 1778 195 42 0 0 chrX 156427976 156428000 -10222296 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 1778 276 77 0 0 chrX 156428658 156428697 -10221599 + (A)n Simple_repeat Simple_repeat 1 39 0 8 1778 391 293 120 11 chrX 156428735 156428918 -10221378 - MER3 DNA MER1_type -6 203 1 8 1778 254 211 0 0 chrX 156429186 156429238 -10221058 + ID4 SINE ID 1 52 -31 8 1778 189 107 0 0 chrX 156429323 156429351 -10220945 + (CA)n Simple_repeat Simple_repeat 2 29 0 8 1778 231 324 0 13 chrX 156430228 156430303 -10219993 - ID4_ SINE ID -9 74 1 8 1778 526 256 119 40 chrX 156430380 156430657 -10219639 - L1ME1 LINE L1 -96 6083 5785 8 1778 450 276 47 47 chrX 156430689 156430818 -10219478 + B4A SINE B4 164 292 0 8 1778 1102 281 109 12 chrX 156430865 156431409 -10218887 - L1ME1 LINE L1 -398 5766 5170 8 1778 624 258 43 40 chrX 156432266 156432414 -10217882 - L1ME3A LINE L1 -218 5955 5806 8 1778 1035 160 118 20 chrX 156432414 156432618 -10217678 - URR1B DNA MER1_type -1 224 1 8 1778 624 258 43 40 chrX 156432618 156432747 -10217549 - L1ME3A LINE L1 -368 5805 5677 8 1778 338 259 20 21 chrX 156432755 156432876 -10217420 - L1MB7 LINE L1 -32 6146 6028 8 1778 260 253 21 149 chrX 156432911 156433072 -10217224 - MLT1A0 LTR MaLR -270 138 2 8 1778 444 262 40 20 chrX 156434804 156434952 -10215344 + ID_B1 SINE B4 68 218 -6 8 1778 1177 290 49 17 chrX 156434989 156435336 -10214960 - Lx8 LINE L1 -6 7467 7110 8 1778 193 308 88 44 chrX 156435839 156435975 -10214321 + MIRc SINE MIR 33 174 -94 8 1778 295 290 21 31 chrX 156436125 156436221 -10214075 - PB1D7 SINE Alu -1 119 25 8 1778 1089 63 0 14 chrX 156436243 156436387 -10213909 + L1_Mus2 LINE L1 6039 6180 -386 8 1778 1005 78 0 0 chrX 156436388 156436529 -10213767 - B1_Mus1 SINE Alu 0 148 8 8 1778 3256 60 0 0 chrX 156436541 156436940 -10213356 + L1_Mus2 LINE L1 6168 6566 0 8 1778 593 215 9 0 chrX 156437112 156437219 -10213077 + PB1D9 SINE Alu 2 109 -11 8 1778 310 222 42 0 chrX 156437287 156437359 -10212937 - PB1D10 SINE Alu -7 110 36 8 1778 240 314 75 29 chrX 156438057 156438231 -10212065 + L1MC5 LINE L1 7701 7882 -79 8 1778 558 0 0 0 chrX 156438661 156438723 -10211573 + (TC)n Simple_repeat Simple_repeat 2 63 0 8 1778 426 69 0 0 chrX 156438723 156438780 -10211516 + (TG)n Simple_repeat Simple_repeat 1 58 0 8 1778 721 283 10 10 chrX 156438837 156439037 -10211259 - MLT1A0 LTR MaLR -165 200 1 8 1778 417 223 0 41 chrX 156439287 156439385 -10210911 + PB1D9 SINE Alu 12 105 -15 8 1778 465 66 0 0 chrX 156439386 156439447 -10210849 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 1778 1373 18 6 0 chrX 156439554 156439719 -10210577 + L1Md_F2 LINE L1 6405 6570 -12 8 1778 504 255 89 0 chrX 156440592 156440749 -10209547 + MER5B DNA MER1_type 8 178 0 8 1778 26 0 0 0 chrX 156442054 156442080 -10208216 + AT_rich Low_complexity Low_complexity 1 26 0 8 1778 34 42 0 0 chrX 156442146 156442194 -10208102 + AT_rich Low_complexity Low_complexity 1 48 0 8 1778 281 237 17 0 chrX 156442438 156442497 -10207799 - RSINE1 SINE B4 -62 103 44 8 1778 7616 71 6 1 chrX 156442516 156443500 -10206796 - L1_Mus3 LINE L1 0 6638 5650 8 1778 800 197 20 0 chrX 156444015 156444162 -10206134 + B1_Mur4 SINE Alu 1 150 0 8 1778 890 203 91 0 chrX 156444173 156444360 -10205936 - B3 SINE B2 -11 205 2 8 1778 902 251 81 64 chrX 156445852 156446027 -10204269 - L1MB8 LINE L1 -2 6176 6000 8 1778 207 0 0 0 chrX 156446027 156446050 -10204246 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 8 1778 1132 66 0 0 chrX 156446052 156446189 -10204107 - B1_Mm SINE Alu -10 137 1 8 1778 902 251 81 64 chrX 156446189 156446528 -10203768 - L1MB8 LINE L1 -179 5999 5650 8 1778 4589 98 41 1 chrX 156446567 156447980 -10202316 + L1Md_F LINE L1 398 1870 -4013 8 1778 594 186 81 2 chrX 156448770 156448912 -10201384 - MTE2b LTR MaLR -2 377 206 8 1778 562 121 30 0 chrX 156449053 156449152 -10201144 - L1Md_F2 LINE L1 -11 6571 6470 8 1778 490 260 25 131 chrX 156449152 156449351 -10200945 + MTE2a LTR MaLR 17 194 -185 8 1778 230 281 171 0 chrX 156449775 156449857 -10200439 + MIRm SINE MIR 49 144 -132 8 1778 231 36 0 0 chrX 156449857 156449885 -10200411 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 8 1778 786 68 17 0 chrX 156450231 156450348 -10199948 - L1_Mus1 LINE L1 0 6567 6449 8 1778 1931 153 113 3 chrX 156450750 156451103 -10199193 - ORR1B1 LTR MaLR 0 394 3 8 1778 409 292 101 94 chrX 156451248 156451407 -10198889 + RSINE1 SINE B4 3 162 -3 8 1778 1177 233 67 38 chrX 156451421 156451787 -10198509 + MTE2a LTR MaLR 22 398 -21 8 1778 791 282 101 38 chrX 156451999 156452423 -10197873 - Charlie4a DNA MER1_type -26 482 32 8 1778 2028 88 75 0 chrX 156453177 156453493 -10196803 - L1_Mus3 LINE L1 0 6638 6323 8 1778 1810 90 8 4 chrX 156453493 156453760 -10196536 + L1_Mus3 LINE L1 6039 6306 -332 8 1778 489 257 105 0 chrX 156454784 156454889 -10195407 - B1F SINE Alu -33 116 1 8 1778 1123 88 7 0 chrX 156454933 156455080 -10195216 + B1_Mus1 SINE Alu 1 148 0 8 1778 312 137 0 0 chrX 156455080 156455131 -10195165 + (A)n Simple_repeat Simple_repeat 1 51 0 8 1778 341 269 81 43 chrX 156455132 156455342 -10194954 - L1M4b LINE L1 -4477 2857 2640 8 1778 280 309 0 24 chrX 156455368 156455451 -10194845 - ID4 SINE ID -2 81 1 8 1778 443 301 38 0 chrX 156455451 156455584 -10194712 - B1F SINE Alu -3 146 9 8 1778 383 157 164 9 chrX 156455635 156455751 -10194545 - L1M4b LINE L1 -5128 2206 2073 8 1778 910 293 119 12 chrX 156455762 156456014 -10194282 - B4A SINE B4 0 292 14 8 1778 430 276 187 18 chrX 156456019 156456469 -10193827 - L1M4b LINE L1 -5261 2073 1548 8 1778 597 266 13 7 chrX 156456517 156456672 -10193624 - RSINE1 SINE B4 -7 158 3 8 1778 644 261 34 50 chrX 156456807 156457129 -10193167 - L1M4b LINE L1 -5774 1560 1244 8 1778 313 372 42 75 chrX 156457147 156457359 -10192937 - L1M4b LINE L1 -6086 1248 1044 8 1778 25 51 0 0 chrX 156457359 156457398 -10192898 + AT_rich Low_complexity Low_complexity 1 39 0 8 1778 222 194 0 0 chrX 156458026 156458062 -10192234 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 1778 444 349 101 28 chrX 156458701 156459126 -10191170 - L1M4b LINE L1 -6375 959 504 8 1778 1578 89 9 0 chrX 156459229 156459443 -10190853 + L1_Mus2 LINE L1 6351 6566 0 8 1778 310 345 202 6 chrX 156459543 156459721 -10190575 - L1M4b LINE L1 -7033 301 89 8 1778 15238 121 82 8 chrX 156459723 156464621 -10185675 - Lx3_Mus LINE L1 0 7009 1428 8 1778 5410 71 7 11 chrX 156464653 156465376 -10184920 - L1Md_F2 LINE L1 -2 6580 5861 8 1778 1658 179 79 6 chrX 156465377 156465731 -10184565 - L1VL1 LINE L1 -6030 392 13 8 1778 1509 70 166 0 chrX 156465736 156466169 -10184127 - L1_Mur1 LINE L1 -4447 1439 935 8 1778 18273 84 5 10 chrX 156466163 156469586 -10180710 - L1Md_F LINE L1 -2000 3883 480 8 1778 317 183 17 0 chrX 156469586 156469646 -10180650 - L1VL1 LINE L1 -6348 74 14 8 1778 2044 115 9 0 chrX 156469632 156469963 -10180333 - L1_Mur1 LINE L1 -5975 1007 674 8 1778 510 221 26 26 chrX 156470007 156470160 -10180136 - L1_Mur1 LINE L1 -6617 365 213 8 1778 329 357 80 70 chrX 156470820 156470880 -10179416 + MER58B DNA MER1_type 26 93 -248 8 1778 1006 209 65 0 chrX 156470880 156471081 -10179215 - B3 SINE B2 -2 214 1 8 1778 329 357 80 70 chrX 156471081 156471306 -10178990 + MER58B DNA MER1_type 94 314 -27 8 1778 595 317 34 29 chrX 156471686 156471891 -10178405 - B4A SINE B4 0 292 87 8 1778 2315 101 3 0 chrX 156471858 156472175 -10178121 - ORR1A2 LTR MaLR -9 318 1 8 1778 284 344 23 38 chrX 156472283 156472416 -10177880 - B1_Mus1 SINE Alu -7 141 11 8 1778 485 314 8 17 chrX 156472306 156472426 -10177870 - ID_B1 SINE B4 -25 199 81 8 1778 2382 108 118 4 chrX 156472492 156473092 -10177204 - Lx3A LINE L1 -763 5123 4380 8 1778 1535 83 4 12 chrX 156473092 156473335 -10176961 + Lx3A LINE L1 5129 5369 -517 8 1778 3372 75 17 0 chrX 156473707 156474171 -10176125 + L1_Mur1 LINE L1 5326 5797 -89 8 1778 27 81 0 0 chrX 156475032 156475094 -10175202 + AT_rich Low_complexity Low_complexity 1 62 0 8 1778 5169 94 10 30 chrX 156475378 156476208 -10174088 + Lx3A LINE L1 5782 6597 -384 8 1778 1513 109 24 24 chrX 156476210 156476464 -10173832 + Lx3A LINE L1 6711 6964 -17 8 1778 688 77 19 0 chrX 156476465 156476569 -10173727 + (GA)n Simple_repeat Simple_repeat 2 107 0 8 1778 672 221 0 8 chrX 156476599 156476722 -10173574 + ID_B1 SINE B4 94 215 -9 8 1778 211 350 155 0 chrX 156476731 156476925 -10173371 - L3 LINE CR1 -454 4035 3812 8 1778 35 54 0 0 chrX 156476953 156477009 -10173287 + AT_rich Low_complexity Low_complexity 1 56 0 8 1778 3288 259 98 13 chrX 156477091 156478089 -10172207 - Lx7 LINE L1 -336 7360 6278 8 1778 414 108 0 0 chrX 156478197 156478262 -10172034 + (TG)n Simple_repeat Simple_repeat 2 66 0 8 1778 189 0 0 0 chrX 156478895 156478916 -10171380 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 8 1778 190 310 92 15 chrX 156479312 156479449 -10170847 + MIR3 SINE MIR 67 199 -9 8 1778 237 341 22 22 chrX 156479634 156479724 -10170572 + MIRb SINE MIR 42 131 -137 8 1778 351 0 0 0 chrX 156481686 156481725 -10168571 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 1778 225 0 0 0 chrX 156482356 156482381 -10167915 + (TTA)n Simple_repeat Simple_repeat 3 27 0 8 1778 382 311 77 30 chrX 156482401 156482570 -10167726 - MIR SINE MIR -69 193 17 8 1778 500 292 20 7 chrX 156483063 156483211 -10167085 - ID_B1 SINE B4 -5 219 70 8 1778 343 75 0 0 chrX 156483473 156483526 -10166770 - Lx2 LINE L1 -1 6996 6944 8 1778 1426 106 5 0 chrX 156483526 156483734 -10166562 - Lx2 LINE L1 -308 6689 6481 8 1778 1296 64 0 0 chrX 156483725 156483896 -10166400 + L1_Mm LINE L1 5458 5628 -255 8 1778 397 239 120 0 chrX 156484001 156484118 -10166178 + MER20 DNA MER1_type 88 218 -1 8 1778 3591 150 63 54 chrX 156484795 156485856 -10164440 - RLTR13D1 LTR ERVK 0 1023 1 9 1778 785 173 0 80 chrX 156485907 156486058 -10164238 + B1_Mur2 SINE Alu 2 140 -9 9 1778 191 170 0 21 chrX 156486068 156486116 -10164180 + GA-rich Low_complexity Low_complexity 1 47 0 9 1778 315 193 0 0 chrX 156486199 156486282 -10164014 + GA-rich Low_complexity Low_complexity 2 84 0 9 1778 932 161 0 0 chrX 156486530 156486673 -10163623 + B1_Mur4 SINE Alu 2 144 -6 9 1778 1971 122 98 36 chrX 156486805 156487163 -10163133 - MTC LTR MaLR -36 385 6 9 1778 195 42 0 0 chrX 156487172 156487196 -10163100 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 1778 1221 131 5 5 chrX 156487414 156487606 -10162690 + URR1A DNA MER1_type 35 226 0 9 1778 1892 305 73 11 chrX 156487743 156488563 -10161733 - Lx8 LINE L1 -30 7443 6573 9 1778 247 333 0 0 chrX 156488563 156488638 -10161658 + (TG)n Simple_repeat Simple_repeat 1 75 0 9 1778 895 309 3 16 chrX 156488647 156488963 -10161333 + Lx8 LINE L1 6191 6502 -971 9 1778 2223 132 90 42 chrX 156489003 156489405 -10160891 - MTC LTR MaLR 0 421 1 9 1778 338 286 88 0 chrX 156489410 156489501 -10160795 - MLT1J LTR MaLR -329 183 85 9 1778 23 33 0 0 chrX 156489610 156489640 -10160656 + AT_rich Low_complexity Low_complexity 1 30 0 9 1778 662 310 66 20 chrX 156490005 156490425 -10159871 - L1ME2 LINE L1 -31 6133 5693 9 1778 455 118 13 0 chrX 156490432 156490508 -10159788 + (TCTG)n Simple_repeat Simple_repeat 2 78 0 9 1778 207 186 0 0 chrX 156490512 156490555 -10159741 + (TA)n Simple_repeat Simple_repeat 1 43 0 9 1778 255 334 116 47 chrX 156491679 156491961 -10158335 - ORR1E LTR MaLR 0 374 95 9 1778 1641 265 123 19 chrX 156492058 156492538 -10157758 - MTE-int LTR MaLR -6 1574 1045 9 1778 1597 324 95 64 chrX 156492580 156493173 -10157123 - MTE-int LTR MaLR -624 956 357 9 1778 1014 242 9 5 chrX 156493173 156493385 -10156911 - B3 SINE B2 -1 215 3 9 1778 1597 324 95 64 chrX 156493385 156493662 -10156634 - MTE-int LTR MaLR -1224 356 60 9 1778 488 313 30 114 chrX 156493687 156493730 -10156566 - MT2A LTR ERVL 0 533 491 9 1778 285 98 0 0 chrX 156493730 156493771 -10156525 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1778 488 316 55 98 chrX 156493771 156494173 -10156123 - MT2A LTR ERVL -99 502 115 9 1778 760 271 113 39 chrX 156494958 156495339 -10154957 - L1MB2 LINE L1 -67 6104 5696 9 1778 265 308 0 71 chrX 156495599 156495662 -10154634 + ID_B1 SINE B4 127 183 -41 9 1778 995 79 11 11 chrX 156495662 156495841 -10154455 + (TAGA)n Simple_repeat Simple_repeat 1 179 0 9 1778 265 308 0 71 chrX 156495841 156495875 -10154421 + ID_B1 SINE B4 184 217 -7 9 1778 444 93 0 0 chrX 156495875 156495950 -10154346 + (TAGA)n Simple_repeat Simple_repeat 1 75 0 9 1778 423 56 0 0 chrX 156495981 156496035 -10154261 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 9 1778 804 67 0 109 chrX 156496069 156496271 -10154025 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 9 1778 528 65 0 0 chrX 156496305 156496382 -10153914 + (TAGA)n Simple_repeat Simple_repeat 2 78 0 9 1778 822 76 7 40 chrX 156496417 156496568 -10153728 + (TAGA)n Simple_repeat Simple_repeat 2 147 0 9 1778 644 183 31 15 chrX 156496599 156496759 -10153537 + Lx2B LINE L1 6575 6727 -273 9 1778 360 231 34 8 chrX 156496768 156496886 -10153410 + Lx2B LINE L1 6869 6989 -11 9 1778 696 249 75 29 chrX 156496906 156497054 -10153242 + B3 SINE B2 23 173 -43 9 1778 225 0 0 0 chrX 156497054 156497079 -10153217 + (TA)n Simple_repeat Simple_repeat 2 26 0 9 1778 696 249 75 29 chrX 156497079 156497104 -10153192 + B3 SINE B2 174 203 -13 9 1778 244 351 160 19 chrX 156497203 156497409 -10152887 + MARNA DNA Mariner 257 491 -95 9 1778 333 259 70 12 chrX 156497661 156497747 -10152549 - MER20 DNA MER1_type -94 125 35 9 1778 181 232 181 12 chrX 156497841 156497924 -10152372 + MIRb SINE MIR 127 223 -45 9 1778 216 97 0 0 chrX 156498475 156498506 -10151790 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 9 1778 1211 205 50 143 chrX 156498700 156499042 -10151254 - ORR1C2 LTR MaLR 0 384 75 9 1778 446 342 51 6 chrX 156499568 156499724 -10150572 + RSINE1 SINE B4 3 165 0 9 1779 419 242 304 6 chrX 156500619 156500777 -10149519 + ID_B1 SINE B4 3 207 -17 1 1779 283 343 123 109 chrX 156500851 156501136 -10149160 - LTR16C LTR ERVL -15 474 186 2 1779 369 109 0 0 chrX 156501138 156501193 -10149103 + (CAG)n Simple_repeat Simple_repeat 3 57 0 3 1779 24 32 0 0 chrX 156501939 156501970 -10148326 + AT_rich Low_complexity Low_complexity 1 31 0 4 1779 484 246 9 18 chrX 156502097 156502209 -10148087 + PB1 SINE Alu 13 123 -4 5 1779 1278 272 145 25 chrX 156502457 156502745 -10147551 - Lx8 LINE L1 0 7473 7141 6 1779 925 52 141 0 chrX 156502745 156502880 -10147416 - L1_Mus2 LINE L1 -1 6565 6412 7 1779 1278 272 145 25 chrX 156502880 156503238 -10147058 - Lx8 LINE L1 -333 7140 6750 6 1779 25 65 0 0 chrX 156503354 156503400 -10146896 + AT_rich Low_complexity Low_complexity 1 46 0 8 1779 410 236 0 11 chrX 156503400 156503490 -10146806 - B3 SINE B2 0 216 128 9 1779 702 241 49 25 chrX 156503488 156503650 -10146646 - ORR1E LTR MaLR -190 169 4 1 1779 763 244 56 110 chrX 156504085 156504577 -10145719 - L1MB8 LINE L1 -9 6169 5637 1 1779 232 250 67 0 chrX 156504646 156504706 -10145590 - MLT1J2 LTR MaLR -348 100 37 1 1779 686 328 59 36 chrX 156505167 156505611 -10144685 - LTR33A_ LTR ERVL 0 531 1 1 1779 261 289 65 59 chrX 156505666 156505835 -10144461 - L1ME2 LINE L1 -11 6153 5984 1 1779 283 256 38 13 chrX 156505961 156506040 -10144256 + CT-rich Low_complexity Low_complexity 5 85 0 1 1779 252 77 0 0 chrX 156506117 156506156 -10144140 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1779 393 237 20 20 chrX 156506159 156506258 -10144038 - PB1D7 SINE Alu -17 103 5 1 1779 429 20 0 0 chrX 156506855 156506905 -10143391 + (GAAA)n Simple_repeat Simple_repeat 3 52 0 1 1779 267 372 0 40 chrX 156507205 156507331 -10142965 - L2 LINE L2 -412 3007 2887 1 1779 455 118 0 13 chrX 156507360 156507437 -10142859 + (TTG)n Simple_repeat Simple_repeat 3 78 0 2 1779 394 252 61 0 chrX 156507447 156507546 -10142750 - PB1D10 SINE Alu -12 105 1 2 1779 321 316 191 14 chrX 156507580 156507795 -10142501 - L2 LINE L2 -597 2822 2570 1 1779 295 386 26 0 chrX 156507925 156508039 -10142257 - MER5B DNA MER1_type -47 131 15 2 1779 3041 59 13 5 chrX 156508546 156508939 -10141357 - MTA_Mm LTR MaLR 0 396 1 2 1779 748 199 14 71 chrX 156509199 156509410 -10140886 + MER105 DNA DNA 4 202 -2 2 1779 542 294 41 14 chrX 156509540 156509685 -10140611 + B1F SINE Alu 1 149 0 2 1779 1343 45 84 6 chrX 156509865 156510044 -10140252 - B2_Mm2 SINE B2 -2 193 1 2 1779 207 261 0 0 chrX 156510215 156510284 -10140012 + (TAA)n Simple_repeat Simple_repeat 1 69 0 2 1779 358 226 133 31 chrX 156510465 156510593 -10139703 + B1F2 SINE Alu 1 141 -8 2 1779 335 383 85 39 chrX 156511271 156511516 -10138780 - L2a LINE L2 0 3426 3165 2 1779 317 279 13 0 chrX 156511516 156511595 -10138701 - ID4 SINE ID -2 81 2 3 1779 335 383 85 39 chrX 156511595 156511762 -10138534 - L2a LINE L2 -262 3164 2995 2 1779 313 380 36 21 chrX 156512143 156512283 -10138013 - MLT1H LTR MaLR -304 245 104 3 1779 285 237 34 0 chrX 156512445 156512504 -10137792 - B1F SINE Alu -75 74 14 3 1779 234 259 88 104 chrX 156512504 156512563 -10137733 - MT2B2 LTR ERVL -348 224 114 3 1779 531 280 23 46 chrX 156513715 156513846 -10136450 + B1_Mur2 SINE Alu 2 129 -20 3 1779 459 0 0 0 chrX 156513853 156513904 -10136392 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1779 265 0 0 24 chrX 156515217 156515258 -10135038 - L1Md_F2 LINE L1 -11 6571 6532 3 1779 1408 69 11 0 chrX 156515372 156515560 -10134736 + B2_Mm1a SINE B2 1 190 -3 3 1779 499 262 92 6 chrX 156515777 156515950 -10134346 - L1MA4A LINE L1 -396 5907 5720 3 1779 1661 275 56 31 chrX 156516452 156516933 -10133363 - MER77 LTR ERVL -49 558 66 3 1779 501 344 14 0 chrX 156517211 156517432 -10132864 + L1MD1 LINE L1 5965 6188 -54 4 1779 264 309 12 47 chrX 156518029 156518114 -10132182 - ID4 SINE ID -1 82 1 4 1779 1279 103 27 0 chrX 156518214 156518398 -10131898 + B2_Mm1t SINE B2 1 189 -4 4 1779 315 85 0 0 chrX 156519848 156519895 -10130401 + (T)n Simple_repeat Simple_repeat 1 47 0 4 1779 1698 21 0 0 chrX 156519895 156520087 -10130209 - B2_Mm1a SINE B2 0 193 2 4 1779 489 272 26 123 chrX 156520219 156520374 -10129922 - RSINE1 SINE B4 0 165 26 4 1779 339 358 130 0 chrX 156521188 156521311 -10128985 - B1F1 SINE Alu -10 139 1 4 1779 544 244 47 16 chrX 156521331 156521460 -10128836 - MLT1J1 LTR MaLR -307 137 5 4 1779 561 101 20 10 chrX 156522149 156522249 -10128047 + (TCC)n Simple_repeat Simple_repeat 3 103 0 4 1779 201 182 0 0 chrX 156522250 156522305 -10127991 + (CCA)n Simple_repeat Simple_repeat 2 56 0 4 1779 194 340 48 29 chrX 156522551 156522654 -10127642 + MIR3 SINE MIR 74 178 -30 5 1779 329 270 102 16 chrX 156523107 156523229 -10127067 + B1F SINE Alu 19 148 -1 5 1779 278 101 0 0 chrX 156523238 156523285 -10127011 + Lx2B LINE L1 6788 6829 -171 5 1779 674 240 130 0 chrX 156523352 156523506 -10126790 + B3A SINE B2 9 182 -16 5 1779 283 136 17 17 chrX 156523531 156523591 -10126705 + (TA)n Simple_repeat Simple_repeat 1 60 0 5 1779 23 33 0 0 chrX 156523591 156523621 -10126675 + AT_rich Low_complexity Low_complexity 1 30 0 5 1779 378 0 0 0 chrX 156523655 156523697 -10126599 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 5 1779 858 169 0 12 chrX 156523711 156523873 -10126423 + Lx5 LINE L1 6741 6900 -150 5 1779 25 0 0 0 chrX 156523873 156523898 -10126398 + AT_rich Low_complexity Low_complexity 1 25 0 5 1779 724 216 15 0 chrX 156523907 156524041 -10126255 - B1_Mus2 SINE Alu 0 147 12 5 1779 1060 70 21 7 chrX 156524042 156524186 -10126110 + B1_Mm SINE Alu 2 147 0 6 1779 388 208 267 0 chrX 156524402 156524604 -10125692 - L1M4 LINE L1 -1634 4512 4257 6 1779 576 262 113 16 chrX 156524622 156524808 -10125488 - B3 SINE B2 -10 206 3 6 1779 890 292 88 25 chrX 156525045 156525562 -10124734 - L1ME3 LINE L1 -124 6038 5478 6 1779 1071 71 29 0 chrX 156525574 156525714 -10124582 - B1_Mus1 SINE Alu -2 146 3 6 1779 188 91 91 0 chrX 156526070 156526103 -10124193 - L3b LINE CR1 -131 351 316 6 1779 775 223 0 0 chrX 156526273 156526421 -10123875 - B1_Mur2 SINE Alu 0 149 2 6 1779 226 299 10 20 chrX 156526479 156526578 -10123718 - L1MA6 LINE L1 0 6300 6203 6 1779 572 298 21 0 chrX 156526664 156526805 -10123491 + B1F1 SINE Alu 6 149 0 6 1779 249 267 29 10 chrX 156526823 156526925 -10123371 - L1MA6 LINE L1 -182 6118 6015 6 1779 390 21 0 0 chrX 156526925 156526972 -10123324 + (TATG)n Simple_repeat Simple_repeat 2 48 0 6 1779 677 205 115 60 chrX 156526976 156527158 -10123138 - B3 SINE B2 -24 192 1 7 1779 520 185 72 22 chrX 156527226 156527364 -10122932 + L1M2 LINE L1 5656 5800 -491 7 1779 21 57 0 0 chrX 156528140 156528175 -10122121 + AT_rich Low_complexity Low_complexity 1 35 0 7 1779 474 301 38 38 chrX 156528658 156528817 -10121479 - RSINE1 SINE B4 -6 159 1 7 1779 482 256 17 8 chrX 156528818 156528936 -10121360 - PB1D7 SINE Alu 0 120 2 7 1779 245 53 0 50 chrX 156529448 156529488 -10120808 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 7 1779 567 103 0 0 chrX 156529999 156530077 -10120219 - ID4_ SINE ID -3 80 3 7 1779 274 222 32 43 chrX 156530296 156530390 -10119906 - Lx7 LINE L1 -17 7679 7587 7 1779 203 273 0 35 chrX 156530877 156530934 -10119362 - MIR3 SINE MIR -4 204 150 7 1779 204 83 56 0 chrX 156532009 156532045 -10118251 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 7 1779 3313 268 65 40 chrX 156532681 156533852 -10116444 - Lx8 LINE L1 -6 7467 6247 8 1779 470 275 144 32 chrX 156533852 156534040 -10116256 + B3 SINE B2 2 210 -6 8 1779 3313 256 40 36 chrX 156534040 156534107 -10116189 - Lx8 LINE L1 -1227 6246 6200 8 1779 390 119 0 12 chrX 156534188 156534288 -10116008 - B2_Mm2 SINE B2 -14 181 47 8 1779 1231 85 11 11 chrX 156534331 156534509 -10115787 - B2_Mm1t SINE B2 -14 179 2 8 1779 900 25 124 0 chrX 156534531 156534652 -10115644 - B1_Mus1 SINE Alu 0 148 13 8 1779 799 193 14 0 chrX 156534710 156534855 -10115441 - B1_Mus1 SINE Alu -1 147 1 8 1779 1605 156 161 12 chrX 156534988 156535312 -10114984 - ORR1B1 LTR MaLR -21 373 2 8 1779 204 156 22 0 chrX 156535846 156535891 -10114405 + T-rich Low_complexity Low_complexity 3 48 0 8 1779 709 60 30 0 chrX 156536447 156536547 -10113749 - B1_Mus1 SINE Alu -44 104 2 8 1779 250 224 128 60 chrX 156536547 156536584 -10113712 - RLTR25A LTR ERVK -629 474 429 8 1779 21 0 0 0 chrX 156536783 156536804 -10113492 + AT_rich Low_complexity Low_complexity 1 21 0 9 1779 894 196 150 0 chrX 156536806 156537066 -10113230 + Lx2B LINE L1 6694 6992 -8 9 1779 719 262 96 22 chrX 156537168 156537398 -10112898 - Lx7 LINE L1 -428 7268 7022 9 1779 232 205 0 0 chrX 156537413 156537452 -10112844 - URR1B DNA MER1_type -184 41 3 9 1779 3051 279 18 17 chrX 156537454 156538400 -10111896 - Lx7 LINE L1 -939 6757 5811 9 1779 1471 42 0 21 chrX 156539494 156539687 -10110609 + B2_Mm2 SINE B2 7 195 0 9 1779 1196 54 0 0 chrX 156539786 156539933 -10110363 + B1_Mus2 SINE Alu 1 147 0 9 1779 279 286 13 0 chrX 156540390 156540467 -10109829 - ID4 SINE ID -3 80 3 9 1779 385 329 75 13 chrX 156540534 156540842 -10109454 - L1MB8 LINE L1 -64 6114 5788 9 1779 180 0 0 0 chrX 156540899 156540919 -10109377 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 9 1779 192 40 0 0 chrX 156540930 156540955 -10109341 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 9 1779 1222 48 0 7 chrX 156540958 156541105 -10109191 - B1_Mm SINE Alu 0 147 2 1 1779 2729 172 26 101 chrX 156541305 156541680 -10108616 - RMER15 LTR ERVL 0 575 229 1 1779 1120 83 0 17 chrX 156541680 156541852 -10108444 + (TTCTC)n Simple_repeat Simple_repeat 4 172 0 1 1779 2729 172 26 101 chrX 156541852 156542059 -10108237 - RMER15 LTR ERVL -347 228 37 1 1779 231 290 16 0 chrX 156544334 156544396 -10105900 + MLT1F2 LTR MaLR 77 139 -430 1 1779 279 223 34 5 chrX 156544740 156544828 -10105468 + MLT1F2 LTR MaLR 491 616 -8 1 1779 271 250 222 0 chrX 156545662 156545806 -10104490 - LTR50 LTR ERVL -570 225 50 1 1779 471 274 42 48 chrX 156546140 156546305 -10103991 - MER3 DNA MER1_type -45 164 1 1 1779 464 302 43 0 chrX 156546316 156546432 -10103864 + B1F SINE Alu 13 133 -16 1 1779 367 336 15 7 chrX 156546444 156546579 -10103717 + B1F SINE Alu 2 137 -12 1 1779 214 222 22 0 chrX 156547573 156547618 -10102678 - B4 SINE B4 -245 47 2 1 1779 4061 203 56 46 chrX 156547804 156548021 -10102275 - Lx4B LINE L1 -2 6998 6748 1 1779 3067 45 42 0 chrX 156548021 156548401 -10101895 - MTA_Mm LTR MaLR 0 396 1 1 1779 4061 191 30 46 chrX 156548401 156549171 -10101125 - Lx4B LINE L1 -309 6749 5991 1 1779 1157 36 7 0 chrX 156549171 156549309 -10100987 - B1_Mus2 SINE Alu -8 139 1 1 1779 4061 191 30 46 chrX 156549309 156549449 -10100847 - Lx4B LINE L1 -1068 5990 5852 1 1779 4164 131 41 6 chrX 156549442 156550147 -10100149 + Lx4B LINE L1 5139 5868 -18 1 1779 708 200 0 8 chrX 156551015 156551146 -10099150 + ID_B1 SINE B4 84 213 -11 1 1779 1169 114 119 0 chrX 156552099 156552301 -10097995 + URR1A DNA MER1_type 1 226 0 1 1779 1166 54 0 26 chrX 156552345 156552497 -10097799 + B1_Mus1 SINE Alu 1 148 0 1 1779 456 292 122 48 chrX 156552589 156552884 -10097412 - MLT1H LTR MaLR -179 370 54 1 1779 311 329 12 47 chrX 156554123 156554292 -10096004 + CT-rich Low_complexity Low_complexity 1 163 0 1 1779 766 168 178 0 chrX 156554930 156555115 -10095181 + URR1A DNA MER1_type 9 226 0 1 1779 396 0 0 0 chrX 156555531 156555575 -10094721 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1779 204 316 148 25 chrX 156556032 156556113 -10094183 + L2b LINE L2 3280 3370 -5 1 1779 595 93 383 0 chrX 156556293 156556400 -10093896 + B1_Mus1 SINE Alu 1 148 0 1 1779 275 253 150 6 chrX 156559170 156559292 -10091004 - MLT1A0 LTR MaLR -53 355 177 1 1779 245 234 0 0 chrX 156562251 156562298 -10087998 - B4A SINE B4 -244 48 2 1 1779 853 66 7 9 chrX 156562716 156562837 -10087459 - Lx2 LINE L1 -433 6564 6463 1 1779 2619 87 112 3 chrX 156562837 156563229 -10087067 + Lx2 LINE L1 6563 6997 0 1 1779 1268 27 0 0 chrX 156564343 156564489 -10085807 - B1_Mus1 SINE Alu -2 146 1 1 1779 1474 70 5 0 chrX 156564522 156564709 -10085587 - B2_Mm1t SINE B2 -4 189 2 1 1779 315 225 0 66 chrX 156565355 156565431 -10084865 - ID4 SINE ID -5 78 8 1 1779 834 213 55 0 chrX 156566078 156566261 -10084035 + B3 SINE B2 24 216 0 1 1779 1290 117 11 0 chrX 156567047 156567235 -10083061 + B2_Mm1a SINE B2 2 191 -2 1 1779 1109 236 74 46 chrX 156568599 156568623 -10081673 + MTEa LTR MaLR 20 35 -344 1 1779 1255 77 70 16 chrX 156568623 156568808 -10081488 + B2_Mm2 SINE B2 1 195 0 1 1779 1109 236 74 46 chrX 156568808 156569133 -10081163 + MTEa LTR MaLR 36 379 0 1 1779 1193 61 0 13 chrX 156569382 156569532 -10080764 + B1_Mus1 SINE Alu 1 148 0 1 1779 411 250 113 46 chrX 156569641 156569792 -10080504 + RSINE1 SINE B4 3 163 -2 1 1779 204 125 0 0 chrX 156569915 156569947 -10080349 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 1 1779 851 113 35 14 chrX 156570312 156570456 -10079840 + B1_Mur4 SINE Alu 4 150 0 1 1779 252 86 0 0 chrX 156570456 156570491 -10079805 + (GGAA)n Simple_repeat Simple_repeat 4 38 0 1 1779 187 56 54 27 chrX 156570526 156570563 -10079733 + (GGGGA)n Simple_repeat Simple_repeat 1 38 0 1 1779 346 336 56 8 chrX 156570568 156570694 -10079602 + ID_B1 SINE B4 88 219 -5 1 1779 21 0 0 0 chrX 156571193 156571214 -10079082 + AT_rich Low_complexity Low_complexity 1 21 0 1 1779 1243 41 0 0 chrX 156571577 156571724 -10078572 - B1_Mus2 SINE Alu 0 147 1 1 1779 430 293 59 114 chrX 156572338 156572611 -10077685 - Tigger7 DNA MER2_type -2219 272 15 1 1779 499 204 0 42 chrX 156573006 156573124 -10077172 + B1_Mus1 SINE Alu 1 113 -35 1 1779 232 226 47 31 chrX 156573262 156573326 -10076970 - tRNA-Ala-GCY_ tRNA tRNA -10 65 1 1 1779 489 192 128 23 chrX 156574166 156574299 -10075997 + B1_Mur1 SINE Alu 2 148 -1 1 1779 483 219 35 17 chrX 156574347 156574463 -10075833 + PB1D9 SINE Alu 2 119 -1 1 1779 396 0 0 0 chrX 156574464 156574508 -10075788 + (GAAAA)n Simple_repeat Simple_repeat 3 46 0 1 1779 211 118 0 0 chrX 156575021 156575055 -10075241 + MIR SINE MIR 225 258 -4 1 1779 429 257 56 21 chrX 156576839 156576982 -10073314 + B1F SINE Alu 2 149 0 1 1779 687 286 16 16 chrX 156577517 156577702 -10072594 + B4A SINE B4 106 290 -2 1 1779 331 266 44 14 chrX 156577727 156577870 -10072426 + L1MC4 LINE L1 7147 7313 -729 1 1779 265 269 0 0 chrX 156577984 156578036 -10072260 + RSINE1 SINE B4 10 61 -104 1 1779 279 0 0 0 chrX 156578053 156578084 -10072212 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1779 396 0 0 0 chrX 156578084 156578127 -10072169 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 1779 2147 72 58 3 chrX 156578149 156578443 -10071853 + L1_Mus3 LINE L1 6314 6623 -15 1 1779 1087 68 0 0 chrX 156578443 156578575 -10071721 + B1_Mm SINE Alu 1 132 -15 1 1779 240 59 0 56 chrX 156579714 156579768 -10070528 + (TTTTTG)n Simple_repeat Simple_repeat 4 54 0 1 1779 1201 34 0 14 chrX 156579768 156579916 -10070380 - B1_Mm SINE Alu 0 147 2 1 1779 1057 100 94 0 chrX 156579925 156580095 -10070201 - B2_Mm2 SINE B2 -9 186 1 1 1779 332 156 31 15 chrX 156580220 156580285 -10070011 - B1_Mur2 SINE Alu -2 147 82 1 1779 258 237 86 17 chrX 156580314 156580430 -10069866 - Lx9 LINE L1 -15 7629 7506 1 1779 378 159 0 0 chrX 156580656 156580725 -10069571 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 1779 680 250 60 51 chrX 156580752 156580967 -10069329 + ID_B1 SINE B4 1 217 -7 1 1779 371 211 118 14 chrX 156581106 156581250 -10069046 + Lx9 LINE L1 7484 7642 -2 1 1779 435 165 0 0 chrX 156581250 156581335 -10068961 + (TA)n Simple_repeat Simple_repeat 2 86 0 1 1779 2773 44 97 32 chrX 156581366 156581738 -10068558 - MTA_Mm LTR MaLR 0 396 1 1 1779 7430 83 22 71 chrX 156581738 156582892 -10067404 - MTA_Mm-int LTR MaLR 0 1098 1 1 1779 2734 78 3 0 chrX 156582894 156583239 -10067057 - MTA_Mm LTR MaLR 0 346 1 1 1779 1347 79 20 40 chrX 156583250 156583434 -10066862 + B2_Mm2 SINE B2 1 183 -12 1 1779 180 0 0 0 chrX 156583434 156583454 -10066842 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1 1779 1347 79 20 40 chrX 156583454 156583467 -10066829 + B2_Mm2 SINE B2 184 194 -1 1 1779 233 218 200 55 chrX 156583541 156583706 -10066590 + L1MC4 LINE L1 7526 7714 -247 1 1779 3330 11 0 0 chrX 156583872 156584242 -10066054 - L1Md_A LINE L1 0 6582 6213 1 1779 226 136 22 43 chrX 156584296 156584342 -10065954 - ID4 SINE ID 0 83 39 1 1779 578 159 248 0 chrX 156584686 156584799 -10065497 - B1_Mus1 SINE Alu -7 141 1 1 1779 1414 162 272 21 chrX 156584800 156585135 -10065161 + MTD LTR MaLR 1 419 0 1 1779 264 227 61 0 chrX 156585363 156585429 -10064867 - MLT1A LTR MaLR -41 333 264 1 1779 474 317 99 10 chrX 156585627 156585828 -10064468 + MIR SINE MIR 28 246 -16 1 1779 1468 65 16 5 chrX 156586066 156586253 -10064043 + B2_Mm2 SINE B2 3 191 -4 1 1779 405 0 0 0 chrX 156586310 156586355 -10063941 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 1779 828 246 6 135 chrX 156586407 156586726 -10063570 - B4A SINE B4 -9 283 6 1 1779 358 353 13 7 chrX 156586869 156587020 -10063276 + MER20B DNA MER1_type 365 516 -267 1 1779 350 307 56 14 chrX 156587191 156587333 -10062963 + B1F SINE Alu 1 148 -1 1 1779 766 171 32 104 chrX 156587448 156587781 -10062515 + ORR1C2 LTR MaLR 1 376 -8 1 1779 422 65 0 16 chrX 156588126 156588189 -10062107 + (TTTTA)n Simple_repeat Simple_repeat 4 65 0 1 1779 285 352 61 80 chrX 156588515 156588665 -10061631 + LTR82B Low_complexity ERVL 78 227 -603 1 1779 672 289 73 24 chrX 156588665 156588871 -10061425 + ID_B1 SINE B4 2 217 -7 1 1779 285 352 61 80 chrX 156588871 156589032 -10061264 + LTR82B Low_complexity ERVL 228 383 -447 1 1779 280 319 14 14 chrX 156589440 156589513 -10060783 + Tigger5 DNA MER2_type 162 234 -2172 1 1779 6086 163 53 18 chrX 156589544 156590704 -10059592 + Lx4B LINE L1 5852 7052 -6 1 1779 902 223 74 94 chrX 156590764 156591061 -10059235 - B4A SINE B4 0 292 2 1 1779 232 254 16 16 chrX 156591849 156591913 -10058383 + L2a LINE L2 3354 3417 -9 1 1779 207 0 0 0 chrX 156591966 156591989 -10058307 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1779 453 333 45 6 chrX 156592051 156592208 -10058088 - RSINE1 SINE B4 0 165 3 1 1779 33026 82 19 14 chrX 156592355 156597733 -10052563 + L1Md_F2 LINE L1 179 5586 -297 1 1779 7559 70 0 46 chrX 156597733 156598608 -10051688 + L1Md_F2 LINE L1 5587 6435 -147 1 1779 1231 48 0 0 chrX 156598608 156598755 -10051541 - B1_Mm SINE Alu 0 147 1 1 1779 7559 70 0 46 chrX 156598755 156598918 -10051378 + L1Md_F2 LINE L1 6436 6577 -5 1 1779 326 244 150 8 chrX 156598939 156599059 -10051237 + L1M4 LINE L1 4380 4516 -1630 1 1779 444 104 0 0 chrX 156599082 156599149 -10051147 + (GGA)n Simple_repeat Simple_repeat 3 69 0 1 1779 783 255 39 0 chrX 156599149 156599353 -10050943 + B3 SINE B2 1 212 -4 1 1779 415 198 0 117 chrX 156599913 156599979 -10050317 - RMER30 DNA MER1_type -9 193 136 1 1779 1186 68 0 0 chrX 156599979 156600127 -10050169 - B1_Mus1 SINE Alu 0 148 1 1 1779 415 198 0 117 chrX 156600127 156600163 -10050133 - RMER30 DNA MER1_type -67 135 103 1 1779 690 167 22 15 chrX 156600217 156600351 -10049945 + B1_Mur2 SINE Alu 15 149 0 1 1779 217 135 0 37 chrX 156600352 156600406 -10049890 + A-rich Low_complexity Low_complexity 3 54 0 1 1779 234 0 0 0 chrX 156600395 156600421 -10049875 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1779 386 252 0 34 chrX 156600423 156600542 -10049754 - RMER30 DNA MER1_type -87 115 1 1 1779 217 301 57 28 chrX 156601289 156601395 -10048901 + L2a LINE L2 3294 3402 -24 1 1779 26 0 0 0 chrX 156601753 156601779 -10048517 + AT_rich Low_complexity Low_complexity 1 26 0 2 1779 28 61 0 0 chrX 156601890 156601939 -10048357 + AT_rich Low_complexity Low_complexity 1 49 0 2 1779 205 178 0 0 chrX 156601946 156601991 -10048305 + A-rich Low_complexity Low_complexity 1 45 0 2 1779 326 267 11 43 chrX 156602109 156602203 -10048093 + MER20 DNA MER1_type 2 92 -127 2 1779 683 149 30 2 chrX 156602450 156602602 -10047694 - ORR1C2 LTR MaLR 0 394 164 2 1779 258 108 0 0 chrX 156603260 156603297 -10046999 - MTE2a LTR MaLR 0 384 348 2 1779 1041 143 265 4 chrX 156603299 156603472 -10046824 + RMER10B LTR ERVL 1 199 -199 2 1779 711 0 0 0 chrX 156603472 156603551 -10046745 + (TTCC)n Simple_repeat Simple_repeat 4 82 0 2 1779 1041 143 265 4 chrX 156603551 156603622 -10046674 + RMER10B LTR ERVL 200 308 -90 2 1779 591 15 0 0 chrX 156603669 156603737 -10046559 + (TC)n Simple_repeat Simple_repeat 2 69 0 2 1779 714 253 17 165 chrX 156603762 156604108 -10046188 - MTE2a LTR MaLR -84 295 1 2 1779 473 261 89 53 chrX 156604213 156604238 -10046058 - B3A SINE B2 0 198 177 2 1779 450 0 0 0 chrX 156604238 156604288 -10046008 + (TC)n Simple_repeat Simple_repeat 2 51 0 2 1779 222 62 0 0 chrX 156604288 156604319 -10045977 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1779 473 261 89 53 chrX 156604319 156604482 -10045814 - B3A SINE B2 -22 176 3 2 1779 191 336 110 89 chrX 156604522 156604894 -10045402 - L2b LINE L2 0 3375 2996 2 1779 2438 179 43 16 chrX 156605050 156605566 -10044730 + RMER5 LTR ERV1 1 530 -4 2 1779 183 80 0 0 chrX 156605611 156605636 -10044660 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1779 486 0 0 0 chrX 156605942 156605996 -10044300 + (TC)n Simple_repeat Simple_repeat 2 55 0 2 1779 351 0 0 0 chrX 156605996 156606034 -10044262 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1779 550 214 0 19 chrX 156606034 156606127 -10044169 + Lx7 LINE L1 6666 6757 -939 2 1779 659 120 92 17 chrX 156606127 156606246 -10044050 - RLTR23 LTR ERV1 0 430 303 2 1779 5413 57 8 28 chrX 156606246 156606301 -10043995 + L1_Mus3 LINE L1 5919 5972 -666 2 1779 1479 52 21 10 chrX 156606301 156606494 -10043802 + B2_Mm2 SINE B2 1 195 0 2 1779 5413 57 8 28 chrX 156606494 156607160 -10043136 + L1_Mus3 LINE L1 5973 6626 -12 2 1779 299 259 93 0 chrX 156607161 156607269 -10043027 + Lx7 LINE L1 7579 7696 0 2 1779 2005 154 17 38 chrX 156607469 156607888 -10042408 + RMER17C LTR ERVK 1 410 0 2 1779 540 267 0 8 chrX 156607888 156608005 -10042291 + RSINE1 SINE B4 35 150 -15 2 1779 298 278 46 9 chrX 156608051 156608160 -10042136 + ID_B1 SINE B4 112 224 0 2 1779 707 241 97 0 chrX 156608162 156608357 -10041939 + B3 SINE B2 3 216 0 2 1779 2694 37 0 24 chrX 156608358 156608690 -10041606 + L1Md_F3 LINE L1 6247 6570 -14 2 1779 243 278 0 27 chrX 156608836 156608910 -10041386 - Cheshire DNA MER1_type -2138 282 211 2 1779 265 310 0 0 chrX 156609356 156609427 -10040869 + ID4_ SINE ID 2 72 -11 2 1779 315 0 0 0 chrX 156609427 156609462 -10040834 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1779 489 88 0 0 chrX 156609462 156609542 -10040754 + (GA)n Simple_repeat Simple_repeat 1 80 0 2 1779 902 206 101 20 chrX 156610162 156610360 -10039936 - B3 SINE B2 -1 215 2 2 1779 876 150 23 0 chrX 156610382 156610555 -10039741 + CT-rich Low_complexity Low_complexity 4 180 0 2 1779 465 226 11 0 chrX 156610564 156610657 -10039639 - PB1D9 SINE Alu -23 97 4 2 1779 31 0 0 0 chrX 156610756 156610787 -10039509 + AT_rich Low_complexity Low_complexity 1 31 0 2 1779 1186 83 0 6 chrX 156610849 156611019 -10039277 - B2_Mm2 SINE B2 -25 170 2 2 1779 649 147 10 0 chrX 156611150 156611252 -10039044 + B1_Mur4 SINE Alu 6 108 -42 2 1779 386 203 0 0 chrX 156611266 156611335 -10038961 + B1F SINE Alu 70 138 -11 2 1779 572 62 12 0 chrX 156611335 156611416 -10038880 + (GGA)n Simple_repeat Simple_repeat 3 84 0 2 1779 440 242 26 0 chrX 156611490 156611643 -10038653 + (CA)n Simple_repeat Simple_repeat 2 158 0 2 1779 1298 275 85 20 chrX 156611659 156612119 -10038177 + L1MA5 LINE L1 5438 5927 -373 2 1779 424 31 30 30 chrX 156612153 156612219 -10038077 + (TATG)n Simple_repeat Simple_repeat 2 67 0 2 1779 514 304 54 4 chrX 156612219 156612477 -10037819 + L1M2 LINE L1 2292 2562 -4287 2 1779 1649 138 3 116 chrX 156612761 156613088 -10037208 - ORR1B1 LTR MaLR -64 330 41 2 1779 314 270 10 101 chrX 156613093 156613192 -10037104 - RSINE1 SINE B4 -66 99 10 2 1779 498 276 29 69 chrX 156613249 156613576 -10036720 + Lx8 LINE L1 5765 6099 -1597 2 1779 872 145 72 0 chrX 156613599 156613737 -10036559 + B1_Mus1 SINE Alu 1 148 0 2 1779 260 244 122 0 chrX 156613819 156613901 -10036395 - Tigger7 DNA MER2_type -172 2319 2228 2 1779 968 298 68 10 chrX 156613889 156614184 -10036112 - Tigger7 DNA MER2_type -2086 405 94 2 1779 1384 96 17 0 chrX 156614237 156614414 -10035882 - B2_Mm2 SINE B2 -14 181 2 2 1779 1276 276 51 53 chrX 156614581 156614937 -10035359 - MTEa LTR MaLR 0 379 25 2 1779 238 254 0 0 chrX 156615903 156615958 -10034338 + MIRb SINE MIR 168 222 -46 2 1779 353 22 0 21 chrX 156616256 156616303 -10033993 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1779 286 257 0 51 chrX 156616702 156616780 -10033516 + Lx8 LINE L1 7153 7226 -247 2 1779 333 289 30 30 chrX 156616787 156616887 -10033409 + RMER15 LTR ERVL 371 470 -105 2 1779 348 165 43 160 chrX 156617080 156617174 -10033122 - B3A SINE B2 0 198 116 2 1779 321 290 120 79 chrX 156617263 156617500 -10032796 - L1MC4 LINE L1 -23 8019 7768 2 1779 342 282 0 0 chrX 156617500 156617578 -10032718 + ID4_ SINE ID 2 79 -4 2 1779 321 290 120 79 chrX 156617578 156617681 -10032615 - L1MC4 LINE L1 -275 7767 7665 2 1779 791 305 58 34 chrX 156618204 156618618 -10031678 - L1ME3 LINE L1 -124 6038 5615 2 1779 906 183 97 22 chrX 156618619 156618879 -10031417 + RLTR20A2 LTR ERVK 1 264 -277 2 1779 347 0 23 0 chrX 156618893 156618936 -10031360 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 2 1779 456 257 38 59 chrX 156618947 156619106 -10031190 + RLTR20A2 LTR ERVK 376 551 0 2 1779 243 317 63 28 chrX 156619126 156619269 -10031027 - L1ME3 LINE L1 -605 5574 5427 2 1779 217 105 0 50 chrX 156619436 156619476 -10030820 + (TCTCTG)n Simple_repeat Simple_repeat 6 43 0 2 1779 319 266 13 0 chrX 156619903 156619987 -10030309 - L1MC4 LINE L1 -364 7678 7589 2 1779 1166 204 14 9 chrX 156620075 156620297 -10029999 - MTC LTR MaLR 0 421 199 2 1779 969 136 6 11 chrX 156620303 156620482 -10029814 + CT-rich Low_complexity Low_complexity 3 180 0 2 1779 585 224 6 11 chrX 156620507 156620587 -10029709 + polypyrimidine Low_complexity Low_complexity 102 180 0 2 1779 1219 55 7 0 chrX 156620587 156620733 -10029563 - B1_Mus1 SINE Alu 0 148 2 2 1779 585 224 6 11 chrX 156620733 156620833 -10029463 + polypyrimidine Low_complexity Low_complexity 2 101 0 2 1779 704 210 151 5 chrX 156620899 156621105 -10029191 - Lx9 LINE L1 -1 7643 7408 2 1779 863 209 71 10 chrX 156621109 156621307 -10028989 - MTC LTR MaLR -209 210 1 2 1779 291 237 90 30 chrX 156621358 156621458 -10028838 + L1MC4 LINE L1 7407 7512 -530 2 1779 367 260 13 0 chrX 156621500 156621577 -10028719 + RSINE1 SINE B4 3 80 -85 2 1779 291 281 171 86 chrX 156621662 156621872 -10028424 + B4A SINE B4 17 244 -48 2 1779 243 0 0 0 chrX 156621897 156621924 -10028372 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1779 1327 113 5 5 chrX 156621982 156622168 -10028128 + B2_Mm2 SINE B2 2 187 -8 2 1779 1326 53 29 0 chrX 156622289 156622459 -10027837 - B2_Mm1a SINE B2 -5 188 14 2 1779 180 0 0 0 chrX 156622640 156622660 -10027636 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 1779 1425 240 96 123 chrX 156622943 156623519 -10026777 + L1M3 LINE L1 2204 2737 -3403 2 1779 957 108 72 0 chrX 156623519 156623658 -10026638 - B1_Mur4 SINE Alu 0 150 2 2 1779 1425 240 96 123 chrX 156623658 156623869 -10026427 + L1M3 LINE L1 2738 2970 -3170 2 1779 1172 231 47 16 chrX 156623870 156624125 -10026171 - Lx8 LINE L1 -135 7338 7076 2 1779 291 263 112 33 chrX 156624190 156624337 -10025959 + L1M3 LINE L1 2943 3096 -3044 2 1779 1289 55 0 0 chrX 156624337 156624483 -10025813 + B1_Mm SINE Alu 2 147 0 2 1779 291 263 112 33 chrX 156624483 156624575 -10025721 + L1M3 LINE L1 3097 3200 -2940 2 1779 476 244 39 113 chrX 156624576 156624607 -10025689 - B2_Mm2 SINE B2 -7 188 160 2 1779 189 0 0 0 chrX 156624607 156624628 -10025668 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1779 707 244 39 113 chrX 156624628 156624799 -10025497 - B3A SINE B2 -38 160 1 2 1779 2022 261 90 12 chrX 156624807 156625473 -10024823 + L1M3 LINE L1 3206 3923 -2217 2 1779 264 184 52 13 chrX 156625490 156625567 -10024729 + Lx7 LINE L1 7326 7405 -291 2 1779 333 0 0 0 chrX 156625570 156625607 -10024689 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1779 305 191 0 9 chrX 156625819 156625890 -10024406 + L1MA9 LINE L1 5860 5928 -384 2 1779 359 346 159 4 chrX 156625980 156626250 -10024046 + L2a LINE L2 2692 3003 -416 2 1779 339 231 38 25 chrX 156626251 156626331 -10023965 - B1F SINE Alu -2 147 67 2 1779 8260 44 0 8 chrX 156626335 156627392 -10022904 - L1Md_F2 LINE L1 -12 6570 5522 2 1779 462 351 68 24 chrX 156627441 156627648 -10022648 + L2a LINE L2 2982 3197 -229 2 1779 286 254 51 0 chrX 156627823 156627902 -10022394 + MTE2b LTR MaLR 1 83 -296 2 1779 213 94 0 0 chrX 156628002 156628034 -10022262 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 2 1779 325 345 58 23 chrX 156628034 156628206 -10022090 + LTR33 LTR ERVL 330 507 -8 2 1779 898 238 42 46 chrX 156628709 156628925 -10021371 + MER20 DNA MER1_type 1 215 -4 2 1779 270 306 146 67 chrX 156630583 156630792 -10019504 - MIR SINE MIR -1 261 44 2 222 273 221 65 0 chrX 156631015 156631092 -10019204 - MIRc SINE MIR -29 239 158 2 1780 1144 206 9 23 chrX 156631653 156631867 -10018429 - B3 SINE B2 -5 211 1 2 1780 1510 75 5 16 chrX 156631874 156632064 -10018232 - B2_Mm1t SINE B2 -5 188 1 2 1780 486 358 92 26 chrX 156632228 156632618 -10017678 + MLT1K LTR MaLR 12 427 -168 2 1780 247 268 14 27 chrX 156632637 156632710 -10017586 - ID4_ SINE ID -6 77 6 2 1780 235 305 62 10 chrX 156632747 156632843 -10017453 + MLT1K LTR MaLR 493 593 -2 2 1780 614 243 17 23 chrX 156633456 156633629 -10016667 + MER5B DNA MER1_type 5 176 -2 2 1780 293 0 27 0 chrX 156633842 156633879 -10016417 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 2 1780 1097 298 32 7 chrX 156633939 156634220 -10016076 - B4A SINE B4 -4 288 1 2 1780 288 222 95 0 chrX 156634236 156634299 -10015997 - ID4 SINE ID -9 74 6 2 1780 687 288 14 51 chrX 156634617 156634833 -10015463 - Lx9 LINE L1 -1089 6555 6348 2 1780 189 0 0 0 chrX 156634834 156634855 -10015441 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 3 1780 897 118 47 0 chrX 156634855 156634982 -10015314 - B1_Mur2 SINE Alu -12 137 5 3 1780 459 0 0 0 chrX 156635009 156635060 -10015236 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1780 477 0 0 0 chrX 156635060 156635112 -10015184 + (GA)n Simple_repeat Simple_repeat 2 54 0 3 1780 25 75 0 0 chrX 156635143 156635196 -10015100 + AT_rich Low_complexity Low_complexity 1 53 0 3 1780 3193 39 0 3 chrX 156635196 156635558 -10014738 - L1Md_F2 LINE L1 -3 6579 6219 3 1780 611 217 218 24 chrX 156635558 156635723 -10014573 - B3 SINE B2 -17 199 3 3 1780 678 228 19 25 chrX 156635789 156635951 -10014345 - Lx9 LINE L1 -1653 5991 5831 2 1780 2312 276 80 52 chrX 156635944 156636400 -10013896 + Lx9 LINE L1 6410 7034 -610 3 1780 7685 39 1 0 chrX 156636400 156637274 -10013022 + L1Md_F3 LINE L1 5696 6570 -14 3 1780 2312 280 83 52 chrX 156637274 156637828 -10012468 + Lx9 LINE L1 6886 7479 -165 3 1780 21 0 0 0 chrX 156637834 156637855 -10012441 + AT_rich Low_complexity Low_complexity 1 21 0 3 1780 539 304 51 0 chrX 156638015 156638153 -10012143 + RSINE1 SINE B4 8 152 -13 3 1780 21 36 0 0 chrX 156638172 156638200 -10012096 + AT_rich Low_complexity Low_complexity 1 28 0 3 1780 355 301 61 17 chrX 156638281 156638396 -10011900 + PB1D9 SINE Alu 1 120 0 3 1780 593 295 45 27 chrX 156638449 156638672 -10011624 + MER63D DNA AcHobo 125 351 -710 3 1780 24 32 0 0 chrX 156638709 156638740 -10011556 + AT_rich Low_complexity Low_complexity 1 31 0 3 1780 356 300 36 0 chrX 156638922 156639032 -10011264 + Lx7 LINE L1 7192 7305 -391 3 1780 251 200 115 10 chrX 156639116 156639212 -10011084 + Lx8 LINE L1 7353 7458 -15 3 1780 565 77 0 0 chrX 156639208 156639286 -10011010 - Lx3A LINE L1 -299 6682 6605 3 1780 1961 120 34 20 chrX 156639286 156639584 -10010712 + Lx3_Mus LINE L1 6692 6993 -16 3 1780 2079 95 24 70 chrX 156639675 156639800 -10010496 + RLTR22_Mur LTR ERVK 894 1020 -828 3 1780 3254 68 0 0 chrX 156639800 156640196 -10010100 + L1Md_T LINE L1 6187 6582 0 3 1780 2079 95 24 70 chrX 156640196 156640444 -10009852 + RLTR22_Mur LTR ERVK 1021 1250 -598 3 1780 390 42 0 0 chrX 156640448 156640496 -10009800 + (TC)n Simple_repeat Simple_repeat 2 49 0 3 1780 252 0 0 0 chrX 156640496 156640523 -10009773 + (TA)n Simple_repeat Simple_repeat 1 28 0 3 1780 286 256 56 0 chrX 156640940 156641030 -10009266 + L1MC4 LINE L1 7560 7654 -388 3 1780 234 311 13 13 chrX 156641374 156641449 -10008847 + ID4 SINE ID 3 77 -6 3 1780 246 32 0 0 chrX 156641450 156641481 -10008815 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1780 711 249 62 12 chrX 156641595 156641839 -10008457 + L1M4 LINE L1 4284 4539 -1607 3 1780 369 0 0 0 chrX 156641839 156641880 -10008416 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1780 511 43 0 14 chrX 156641889 156641959 -10008337 - B1_Mm SINE Alu 0 147 79 3 1780 453 239 30 61 chrX 156641959 156642124 -10008172 + L1M4 LINE L1 4534 4693 -1453 3 1780 2016 164 121 3 chrX 156642124 156642496 -10007800 - MTC LTR MaLR 0 421 6 3 1780 718 205 30 12 chrX 156642518 156642686 -10007610 + L1MB8 LINE L1 5996 6166 -12 3 1780 688 226 7 28 chrX 156642694 156642835 -10007461 + B1_Mus2 SINE Alu 1 138 -9 3 1780 232 27 54 0 chrX 156642835 156642872 -10007424 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1780 3224 92 24 22 chrX 156643268 156643721 -10006575 + Lx LINE L1 6195 6648 -6 3 1780 327 130 0 0 chrX 156643723 156643777 -10006519 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 1780 265 301 47 61 chrX 156644020 156644211 -10006085 - MLT1A0 LTR MaLR -144 215 1 3 1780 1379 103 16 11 chrX 156645414 156645600 -10004696 + B2_Mm2 SINE B2 2 188 -7 3 1780 1279 125 130 0 chrX 156645626 156645826 -10004470 + URR1A DNA MER1_type 1 226 0 3 1780 1254 90 0 0 chrX 156646055 156646233 -10004063 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 3 1780 219 88 0 0 chrX 156646368 156646402 -10003894 + (CAGA)n Simple_repeat Simple_repeat 1 34 0 3 1780 195 129 0 0 chrX 156646432 156646463 -10003833 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 1780 24 32 0 0 chrX 156646479 156646510 -10003786 + AT_rich Low_complexity Low_complexity 1 31 0 3 1780 460 320 20 7 chrX 156646514 156646665 -10003631 - RSINE1 SINE B4 -10 155 3 3 1780 468 183 0 0 chrX 156646720 156646813 -10003483 + GA-rich Low_complexity Low_complexity 3 95 0 3 1780 245 376 35 82 chrX 156646818 156646989 -10003307 - LTR88b LTR Gypsy? -600 237 75 3 1780 1076 131 23 6 chrX 156647245 156647421 -10002875 - URR1A DNA MER1_type 0 226 48 3 1780 206 336 187 11 chrX 156647756 156648254 -10002042 - L2c LINE L2 -76 3350 2697 3 1780 26 0 0 0 chrX 156650367 156650393 -9999903 + AT_rich Low_complexity Low_complexity 1 26 0 3 1780 1060 219 11 0 chrX 156650666 156650853 -9999443 + B3 SINE B2 1 189 -27 3 1780 333 0 0 0 chrX 156650854 156650891 -9999405 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1780 369 0 0 0 chrX 156650891 156650931 -9999365 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 1780 291 351 36 0 chrX 156651042 156651185 -9999111 - MIRm SINE MIR -53 155 11 3 1780 731 278 91 0 chrX 156651204 156651402 -9998894 + ID_B1 SINE B4 8 223 -1 3 1780 925 217 36 21 chrX 156652086 156652279 -9998017 - B3A SINE B2 0 198 3 3 1780 8365 42 1 0 chrX 156652402 156653797 -9996499 - L1Md_F2 LINE L1 0 6582 5186 3 1780 345 100 0 0 chrX 156653835 156653885 -9996411 + (CAA)n Simple_repeat Simple_repeat 3 52 0 3 1780 1223 255 12 4 chrX 156653901 156654149 -9996147 + B4A SINE B4 29 278 -14 3 1780 2875 243 11 28 chrX 156654235 156654886 -9995410 - Lx7 LINE L1 -269 7427 6788 3 1780 423 252 36 80 chrX 156655254 156655392 -9994904 - RMER20B LTR ERVK -491 136 5 3 1780 1245 263 40 73 chrX 156655398 156655821 -9994475 - Lx7 LINE L1 -904 6792 6384 3 1780 6498 175 81 17 chrX 156655831 156657106 -9993190 - L1_Mur3 LINE L1 -1038 4842 3475 3 1780 1436 65 0 32 chrX 156657106 156657296 -9993000 - B2_Mm2 SINE B2 -10 185 2 3 1780 6498 175 81 17 chrX 156657296 156657414 -9992882 - L1_Mur3 LINE L1 -2406 3474 3360 3 1780 348 118 0 0 chrX 156657414 156657465 -9992831 - L1VL4 LINE L1 -5996 306 256 3 1780 3437 95 19 21 chrX 156657461 156657493 -9992803 + Lx2 LINE L1 6322 6344 -653 3 1780 4105 65 2 4 chrX 156657493 156657976 -9992320 - L1_Mus1 LINE L1 0 6567 6086 3 1780 3437 105 214 19 chrX 156657976 156658514 -9991782 + Lx2 LINE L1 6345 6997 0 3 1780 641 197 0 21 chrX 156658513 156658653 -9991643 - L1_Mur3 LINE L1 -2507 3373 3237 3 1780 383 254 93 23 chrX 156658700 156658829 -9991467 + MLT1C LTR MaLR 297 434 -33 3 1780 3432 48 2 8 chrX 156658884 156659282 -9991014 + MTA_Mm LTR MaLR 1 396 0 3 1780 296 247 44 22 chrX 156659283 156659374 -9990922 - L1MD LINE L1 -856 5290 5198 3 1780 722 211 45 0 chrX 156659388 156659521 -9990775 - B1F SINE Alu -9 140 2 3 1780 698 33 0 71 chrX 156659657 156659698 -9990598 - B2_Mm2 SINE B2 -103 92 58 3 1780 4370 55 68 6 chrX 156659698 156660225 -9990071 - LTRIS2 LTR ERV1 0 564 5 3 1780 698 33 0 71 chrX 156660225 156660282 -9990014 - B2_Mm2 SINE B2 -138 57 1 3 1780 215 214 0 0 chrX 156661093 156661135 -9989161 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1780 1511 172 127 48 chrX 156661185 156661539 -9988757 - RLTR41 LTR ERV1 -64 382 1 3 1780 1152 62 41 47 chrX 156661715 156661885 -9988411 + B2_Mm1t SINE B2 1 169 -24 3 1780 344 102 336 28 chrX 156661936 156662043 -9988253 + B2_Mm2 SINE B2 47 186 -9 3 1780 879 299 50 29 chrX 156662045 156662672 -9987624 - MuRRS4-int LTR ERV1 -221 4842 4545 3 1780 250 287 10 10 chrX 156663447 156663549 -9986747 - RNERVK23-int LTR ERVK -1881 6336 6235 3 1780 357 293 129 17 chrX 156664041 156664219 -9986077 - RLTR4_MM-int LTR ERV1 -2000 5601 5468 3 1780 824 225 35 0 chrX 156664233 156664402 -9985894 - B4A SINE B4 -61 231 57 3 1780 387 0 0 0 chrX 156664406 156664449 -9985847 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 1780 743 187 55 41 chrX 156664468 156664613 -9985683 - B1_Mus1 SINE Alu 0 148 2 3 1780 1967 256 44 28 chrX 156664754 156665103 -9985193 + MER74A LTR ERVL 7 362 -196 3 1780 1139 144 202 0 chrX 156665103 156665291 -9985005 - URR1A DNA MER1_type 0 226 1 3 1780 1967 256 44 28 chrX 156665291 156665484 -9984812 + MER74A LTR ERVL 363 558 0 3 1780 542 329 96 10 chrX 156665507 156665820 -9984476 - L1M5 LINE L1 -3433 2713 2374 3 1780 420 111 0 0 chrX 156665882 156665945 -9984351 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1780 7138 114 18 17 chrX 156666123 156667587 -9982709 + Lx LINE L1 5190 6647 -7 3 1780 238 405 0 0 chrX 156668089 156668178 -9982118 - MIRc SINE MIR -102 166 78 3 1780 746 289 17 43 chrX 156668284 156668584 -9981712 + B4A SINE B4 1 292 0 3 1780 512 262 33 52 chrX 156669714 156669867 -9980429 + RSINE1 SINE B4 2 151 -14 3 1780 21 0 0 0 chrX 156669898 156669919 -9980377 + AT_rich Low_complexity Low_complexity 1 21 0 3 1780 280 302 0 111 chrX 156669930 156670038 -9980258 - Tigger7 DNA MER2_type -1 2490 2395 3 1780 980 170 21 57 chrX 156670173 156670366 -9979930 + B2_Mm2 SINE B2 1 186 -9 3 1780 520 204 51 0 chrX 156670399 156670536 -9979760 - Tigger7 DNA MER2_type -94 2397 2255 3 1780 356 298 88 109 chrX 156670549 156670696 -9979600 - Tigger7 DNA MER2_type -2295 196 53 3 1780 317 289 84 23 chrX 156670763 156670894 -9979402 - L1M5 LINE L1 -628 5551 5413 3 1780 329 0 24 0 chrX 156670896 156670937 -9979359 + (TTTTG)n Simple_repeat Simple_repeat 1 42 0 3 1780 387 332 162 22 chrX 156671475 156671795 -9978501 - L1ME4a LINE L1 -286 5838 5474 3 1780 203 116 47 0 chrX 156671799 156671842 -9978454 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 3 1780 381 70 0 0 chrX 156672424 156672481 -9977815 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 1780 255 288 111 50 chrX 156673581 156673765 -9976531 - MIRb SINE MIR -60 208 10 3 1780 913 148 7 0 chrX 156673837 156673986 -9976310 + B1_Mur4 SINE Alu 1 150 0 3 1780 390 221 0 13 chrX 156674034 156674112 -9976184 + ID SINE ID 1 77 -147 3 1780 336 212 0 0 chrX 156674258 156674324 -9975972 + MLT1D LTR MaLR 440 505 0 3 1780 536 242 179 6 chrX 156674362 156674541 -9975755 + MER58A DNA MER1_type 14 223 -1 4 1780 353 313 41 24 chrX 156675336 156675506 -9974790 - L1MC5 LINE L1 -30 7931 7759 4 1780 1147 174 15 0 chrX 156675517 156675712 -9974584 - B3 SINE B2 -18 198 1 4 1780 689 288 19 12 chrX 156675885 156676047 -9974249 + RSINE1 SINE B4 3 165 0 4 1780 354 340 26 84 chrX 156676092 156676246 -9974050 + ID_B1 SINE B4 3 147 -77 4 1780 238 192 66 66 chrX 156676306 156676412 -9973884 + RLTR25B LTR ERVK 397 502 -526 4 1780 785 85 0 0 chrX 156676350 156676456 -9973840 + B1_Mus2 SINE Alu 42 147 0 4 1780 481 250 206 8 chrX 156676583 156676717 -9973579 - Lx9 LINE L1 -44 7600 7436 4 1780 420 20 0 0 chrX 156676717 156676766 -9973530 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1780 481 250 206 8 chrX 156676766 156676869 -9973427 - Lx9 LINE L1 -209 7435 7316 4 1780 1646 261 19 26 chrX 156676894 156677355 -9972941 + Lx9 LINE L1 6703 7160 -484 4 1780 272 322 22 33 chrX 156677791 156677881 -9972415 - 5S rRNA rRNA -31 90 2 4 1780 1321 56 0 11 chrX 156677954 156678135 -9972161 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 4 1780 23 0 0 0 chrX 156678591 156678614 -9971682 + AT_rich Low_complexity Low_complexity 1 23 0 4 1780 282 328 0 0 chrX 156678644 156678708 -9971588 - RSINE1 SINE B4 -15 150 87 4 1780 1457 247 15 78 chrX 156678722 156678905 -9971391 - ORR1D2 LTR MaLR 0 370 191 4 1780 3995 112 21 5 chrX 156678905 156679480 -9970816 + Lx2 LINE L1 6412 6995 -2 4 1780 1457 247 15 78 chrX 156679480 156679691 -9970605 - ORR1D2 LTR MaLR -180 190 2 4 1780 321 321 0 12 chrX 156679691 156679771 -9970525 - RSINE1 SINE B4 -85 80 2 4 1780 518 285 75 52 chrX 156679840 156680014 -9970282 + B3A SINE B2 20 197 -1 4 1780 719 216 22 0 chrX 156680022 156680156 -9970140 - B1_Mur1 SINE Alu -7 142 6 4 1780 2222 145 55 26 chrX 156680710 156681093 -9969203 - ORR1B1 LTR MaLR 0 394 1 4 1780 218 364 0 0 chrX 156681559 156681625 -9968671 - ID4_ SINE ID -9 74 9 4 1780 1572 224 11 62 chrX 156681664 156682036 -9968260 - ORR1E LTR MaLR -4 355 3 4 1780 249 360 27 0 chrX 156682038 156682149 -9968147 + Lx8 LINE L1 7030 7143 -330 4 1780 2349 223 54 22 chrX 156682223 156682759 -9967537 - RLTR18 LTR ERVK 0 616 64 4 1780 527 215 99 0 chrX 156682846 156682967 -9967329 + RMER30 DNA MER1_type 8 140 -62 4 1780 465 286 37 22 chrX 156683038 156683174 -9967122 + RMER15 LTR ERVL 422 559 -16 4 1780 580 329 75 41 chrX 156683192 156683484 -9966812 - L2 LINE L2 -562 2857 2556 4 1780 2012 189 45 35 chrX 156683484 156683772 -9966524 + MTD LTR MaLR 1 289 -130 4 1780 4103 125 99 94 chrX 156683772 156684669 -9965627 + RMER17A2 LTR ERVK 1 902 -4 4 1780 2012 189 45 35 chrX 156684669 156684781 -9965515 + MTD LTR MaLR 290 405 -14 4 1780 332 304 149 21 chrX 156684787 156684975 -9965321 - L2 LINE L2 -848 2571 2360 4 1780 2338 191 0 17 chrX 156685023 156685443 -9964853 - MTC LTR MaLR -8 413 1 4 1780 232 303 89 32 chrX 156685444 156685601 -9964695 - L2 LINE L2 -1129 2290 2125 4 1780 385 206 163 0 chrX 156685903 156685995 -9964301 - PB1D7 SINE Alu -2 118 12 4 1780 285 328 78 31 chrX 156685995 156686032 -9964264 - ID_B1 SINE B4 -2 222 88 4 1780 421 195 13 13 chrX 156686688 156686766 -9963530 - ID4 SINE ID -1 82 5 4 1780 341 320 53 7 chrX 156687887 156688038 -9962258 - MER5A1 DNA MER1_type -8 158 1 4 1780 476 338 120 13 chrX 156688038 156688346 -9961950 - MLT1L LTR MaLR -54 556 216 4 1780 353 237 48 67 chrX 156688389 156688493 -9961803 - MLT1L LTR MaLR -508 102 1 4 1780 504 98 0 38 chrX 156688857 156688954 -9961342 + ORR1A4 LTR MaLR 3 95 -232 4 1780 1399 145 4 27 chrX 156689558 156689820 -9960476 + Lx LINE L1 6399 6654 0 4 1780 1447 75 16 0 chrX 156689847 156690034 -9960262 + B2_Mm2 SINE B2 2 191 -4 4 1780 384 292 103 13 chrX 156690094 156690250 -9960046 + MIRb SINE MIR 81 250 -18 4 1780 502 252 8 39 chrX 156690352 156690480 -9959816 + RSINE1 SINE B4 3 126 -39 4 1780 378 0 0 0 chrX 156690520 156690562 -9959734 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1780 1725 222 48 17 chrX 156690745 156691102 -9959194 + MTE2b LTR MaLR 1 368 -11 4 1780 2085 154 87 6 chrX 156691820 156692178 -9958118 + MTC LTR MaLR 33 419 -2 4 1780 242 229 0 0 chrX 156692232 156692280 -9958016 - MLT1I LTR MaLR -266 145 98 4 1780 474 251 32 13 chrX 156692381 156692503 -9957793 - B1F SINE Alu -25 124 1 4 1780 433 247 167 0 chrX 156692831 156693010 -9957286 + ID_B1 SINE B4 16 224 0 4 1780 322 351 14 51 chrX 156693134 156693272 -9957024 + MER5B DNA MER1_type 29 161 -17 4 1780 184 297 39 51 chrX 156693388 156693466 -9956830 - L3 LINE CR1 -1548 2941 2865 4 1780 855 228 91 19 chrX 156694190 156694400 -9955896 - MTD LTR MaLR 0 419 195 4 1780 32523 77 16 3 chrX 156694403 156700709 -9949587 - L1Md_F2 LINE L1 -19 6563 172 4 1780 684 276 80 9 chrX 156700709 156700921 -9949375 - MTD LTR MaLR -192 227 1 4 1780 1881 149 31 35 chrX 156700938 156701257 -9949039 - MTC LTR MaLR 0 421 104 4 1780 7438 156 38 15 chrX 156701285 156702719 -9947577 + Lx4B LINE L1 5587 7053 -5 4 1780 180 97 0 0 chrX 156702766 156702797 -9947499 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1780 372 302 95 0 chrX 156703580 156703749 -9946547 - MER5A DNA MER1_type 0 189 5 4 1780 445 117 13 25 chrX 156704232 156704311 -9945985 - ORR1C1 LTR MaLR 0 384 307 4 1780 518 211 42 76 chrX 156704273 156704304 -9945992 + B4 SINE B4 66 91 -201 4 1780 984 48 0 0 chrX 156704304 156704430 -9945866 + B1_Mm SINE Alu 1 126 -21 4 1780 986 159 92 171 chrX 156704431 156704735 -9945561 - ORR1C1 LTR MaLR -57 321 42 4 1780 2421 154 39 10 chrX 156704763 156705169 -9945127 + MTC LTR MaLR 2 419 -2 4 1780 284 120 0 20 chrX 156705515 156705566 -9944730 + (TTTTC)n Simple_repeat Simple_repeat 3 52 0 4 1780 496 78 13 0 chrX 156705569 156705646 -9944650 - Lx2 LINE L1 0 6997 6920 4 1780 571 122 131 10 chrX 156705646 156705745 -9944551 + MTC LTR MaLR 10 120 -301 4 1780 1542 139 8 0 chrX 156705780 156706025 -9944271 - Lx4A LINE L1 -9 7049 6803 4 1780 356 93 0 0 chrX 156706025 156706079 -9944217 - Lx4A LINE L1 -1137 5921 5868 4 1780 1847 123 110 0 chrX 156706079 156706371 -9943925 + ORR1A4 LTR MaLR 6 329 0 4 1780 2229 158 50 18 chrX 156706382 156706839 -9943457 - Lx4A LINE L1 -178 5699 5228 4 1780 185 167 23 45 chrX 156707105 156707149 -9943147 + L3 LINE CR1 1122 1164 -3325 4 1780 10563 114 14 40 chrX 156707984 156709833 -9940463 - Lx4A LINE L1 -637 5240 3440 4 1780 1867 63 3 27 chrX 156709842 156710136 -9940160 - L1VL2 LINE L1 -827 2788 2502 4 1780 3726 78 17 7 chrX 156710132 156710838 -9939458 - L1VL2 LINE L1 -2432 1183 467 4 1780 1373 53 65 0 chrX 156711313 156711483 -9938813 - B2_Mm2 SINE B2 -14 181 1 4 1780 686 89 0 0 chrX 156711484 156711574 -9938722 - 4.5SRNA scRNA scRNA -4 90 1 4 1780 289 303 120 16 chrX 156711692 156711950 -9938346 + L1ME3B LINE L1 1611 1895 -4271 4 1780 5672 59 4 1 chrX 156712480 156713194 -9937102 - L1Md_F2 LINE L1 -12 6570 5855 4 1780 414 0 0 0 chrX 156713214 156713260 -9937036 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1780 409 307 66 38 chrX 156713277 156713673 -9936623 - L1M5 LINE L1 -1901 4245 3839 4 1780 303 333 59 71 chrX 156713708 156713947 -9936349 - L1M5 LINE L1 -2378 3768 3533 4 1780 383 313 89 43 chrX 156713938 156714136 -9936160 + L1ME3B LINE L1 3043 3251 -2895 4 1780 416 295 26 18 chrX 156714136 156714250 -9936046 + PB1D10 SINE Alu 3 117 0 4 1780 383 277 48 18 chrX 156714250 156714464 -9935832 + L1ME3B LINE L1 3252 3470 -2676 4 1780 361 319 18 9 chrX 156714475 156714589 -9935707 + PB1D10 SINE Alu 1 115 -2 4 1780 255 185 237 11 chrX 156714678 156714771 -9935525 + L1ME3B LINE L1 5398 5511 -729 4 1780 235 302 57 45 chrX 156715076 156715181 -9935115 + L1ME3B LINE L1 5903 6011 -229 4 1780 1553 47 0 53 chrX 156715181 156715408 -9934888 + L1Md_F3 LINE L1 6368 6582 -2 4 1780 235 302 57 45 chrX 156715408 156715479 -9934817 + L1ME3B LINE L1 6012 6080 -160 4 1780 282 243 42 95 chrX 156715490 156715658 -9934638 - YREP_Mm Unknown Unknown -1472 340 182 4 1780 562 250 22 22 chrX 156715521 156715660 -9934636 + B1F SINE Alu 9 147 -2 4 1780 447 304 20 106 chrX 156715666 156715737 -9934559 + ID SINE ID 27 84 -140 4 1780 375 304 36 0 chrX 156715737 156715849 -9934447 + PB1D10 SINE Alu 1 116 -1 4 1780 520 319 246 22 chrX 156715939 156716430 -9933866 + HAL1 LINE L1 1173 1773 -734 4 1780 316 291 25 33 chrX 156716533 156716594 -9933702 + PB1D9 SINE Alu 1 60 -60 4 1780 1161 253 62 17 chrX 156716594 156716948 -9933348 - ORR1D2 LTR MaLR 0 370 1 4 1780 316 291 25 33 chrX 156716948 156717007 -9933289 + PB1D9 SINE Alu 61 119 -1 4 1780 184 211 0 19 chrX 156717014 156717067 -9933229 + L3 LINE CR1 1225 1276 -3213 4 1780 428 298 163 4 chrX 156717072 156717318 -9932978 + HAL1 LINE L1 2114 2398 -109 4 1780 851 164 105 22 chrX 156717575 156717756 -9932540 + Lx9 LINE L1 7266 7461 -183 4 1780 180 111 0 0 chrX 156717769 156717796 -9932500 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 4 1780 338 211 70 0 chrX 156717796 156717910 -9932386 + Lx9 LINE L1 7522 7643 -1 4 1780 2562 26 6 256 chrX 156717972 156718488 -9931808 + RLTR10 LTR ERVK 1 387 -3 4 1780 7470 39 9 3 chrX 156718503 156719455 -9930841 + RLTR10-int LTR ERVK 41 998 -989 4 1780 340 238 54 31 chrX 156719519 156719649 -9930647 + RLTR10-int LTR ERVK 1462 1594 -5987 4 1780 8422 17 1 0 chrX 156719731 156720725 -9929571 + RLTR10-int LTR ERVK 990 1984 -3 4 1780 2668 21 6 254 chrX 156720727 156721246 -9929050 + RLTR10 LTR ERVK 1 390 0 4 1780 266 243 17 43 chrX 156721250 156721366 -9928930 + L1ME2z LINE L1 6332 6444 0 4 1780 331 376 9 35 chrX 156722189 156722302 -9927994 + ID_B1 SINE B4 70 179 -45 4 1780 378 343 9 0 chrX 156722213 156722321 -9927975 + PB1D10 SINE Alu 9 117 0 4 1780 405 0 0 0 chrX 156722321 156722366 -9927930 + (GGAA)n Simple_repeat Simple_repeat 2 46 0 4 1780 607 273 37 11 chrX 156722466 156722655 -9927641 + L1MB5 LINE L1 5874 6067 -107 4 1780 460 234 287 54 chrX 156722776 156722943 -9927353 + ID_B1 SINE B4 4 209 -15 4 1780 2053 126 47 41 chrX 156723526 156723891 -9926405 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1780 58123 15 7 6 chrX 156723891 156730354 -9919942 + IAPEz-int LTR ERVK 8 6481 0 4 1780 2053 126 47 41 chrX 156730354 156730719 -9919577 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1780 328 307 0 0 chrX 156730971 156731046 -9919250 - PB1D10 SINE Alu -38 79 5 4 1780 348 262 46 18 chrX 156731666 156731775 -9918521 + PB1D10 SINE Alu 1 112 -5 4 1780 228 192 202 0 chrX 156731780 156731828 -9918468 + MER33 DNA MER1_type 158 218 -106 4 1780 186 43 0 0 chrX 156731828 156731851 -9918445 + (CATA)n Simple_repeat Simple_repeat 2 24 0 4 1780 228 192 202 0 chrX 156731851 156731906 -9918390 + MER33 DNA MER1_type 219 281 -43 4 1780 4532 118 37 22 chrX 156732020 156732754 -9917542 + Lx2 LINE L1 5908 6643 -354 4 1780 1501 112 0 0 chrX 156732754 156732977 -9917319 + Lx2 LINE L1 6775 6997 0 4 1780 24 0 0 0 chrX 156732977 156733001 -9917295 + AT_rich Low_complexity Low_complexity 1 24 0 4 1780 416 255 47 9 chrX 156733089 156733196 -9917100 + PB1D10 SINE Alu 6 116 -1 4 1780 1597 231 136 92 chrX 156733538 156734095 -9916201 + Lx6 LINE L1 6610 7191 -269 4 1780 22 0 0 0 chrX 156734101 156734123 -9916173 + AT_rich Low_complexity Low_complexity 1 22 0 5 1780 23 0 0 0 chrX 156734523 156734546 -9915750 + AT_rich Low_complexity Low_complexity 1 23 0 5 1780 11469 86 16 16 chrX 156734698 156736427 -9913869 - MusHAL1 LINE L1 -626 2086 358 5 1780 470 334 41 87 chrX 156736810 156737171 -9913125 + MLT1G3 LTR MaLR 120 472 -83 5 1780 3100 23 2 89 chrX 156738726 156739153 -9911143 - RLTR10 LTR ERVK 0 390 1 5 1780 16647 26 2 32 chrX 156739155 156741158 -9909138 - RLTR10-int LTR ERVK -3 1984 41 5 1780 3108 23 2 89 chrX 156741168 156741595 -9908701 - RLTR10 LTR ERVK 0 390 1 5 1780 5530 65 21 0 chrX 156741610 156742314 -9907982 + L1_Mus2 LINE L1 5847 6565 -1 5 1780 384 40 0 0 chrX 156743290 156743340 -9906956 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1780 607 200 0 16 chrX 156743646 156743768 -9906528 + MTD LTR MaLR 1 120 -299 5 1780 233 242 36 72 chrX 156743772 156743885 -9906411 - Lx7 LINE L1 -5 7691 7580 5 1780 4313 80 90 2 chrX 156743885 156744485 -9905811 + Lx2 LINE L1 6345 6997 0 5 1780 238 245 25 44 chrX 156744485 156744626 -9905670 - Lx7 LINE L1 -117 7579 7366 5 1780 303 320 50 38 chrX 156744661 156744820 -9905476 + MIR SINE MIR 80 240 -22 5 1780 931 120 123 22 chrX 156745918 156746097 -9904199 + Lx LINE L1 6452 6648 -6 5 1780 431 254 83 25 chrX 156746379 156746500 -9903796 + B4A SINE B4 24 151 -141 5 1780 228 200 60 30 chrX 156746528 156746595 -9903701 + B3 SINE B2 147 215 -1 5 1780 910 58 7 48 chrX 156746742 156746888 -9903408 + L1Md_F3 LINE L1 6444 6583 -1 5 1780 323 385 141 17 chrX 156747535 156747826 -9902470 - MER45C DNA Tip100 -267 686 360 5 1780 218 275 0 55 chrX 156748091 156748164 -9902132 + PB1 SINE Alu 59 127 0 5 1780 309 82 0 0 chrX 156748174 156748223 -9902073 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1780 237 348 0 0 chrX 156748251 156748343 -9901953 - MER45C DNA Tip100 -823 130 38 5 1780 1155 118 0 33 chrX 156748472 156748656 -9901640 + B2_Mm2 SINE B2 2 179 -16 5 1780 751 97 217 37 chrX 156748679 156748840 -9901456 - RMER4A LTR ERVK -265 201 12 5 1780 1010 143 172 16 chrX 156749341 156749533 -9900763 + URR1A DNA MER1_type 5 226 0 5 1780 492 200 42 0 chrX 156749766 156749861 -9900435 + B3A SINE B2 8 106 -92 5 1780 254 254 15 15 chrX 156750180 156750248 -9900048 + MIRc SINE MIR 86 153 -115 5 1780 333 0 0 0 chrX 156751070 156751107 -9899189 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 1780 780 309 88 4 chrX 156751165 156751415 -9898881 - B4A SINE B4 -20 272 2 5 1780 273 328 39 59 chrX 156751608 156751864 -9898432 - L1MC4 LINE L1 -372 7670 7420 5 1780 702 259 48 0 chrX 156751866 156752055 -9898241 + B3A SINE B2 1 198 0 5 1780 267 318 19 83 chrX 156752178 156752394 -9897902 - L1MC4 LINE L1 -756 7286 7085 5 1780 281 274 142 0 chrX 156752805 156752911 -9897385 - L1MC4 LINE L1 -1008 7034 6914 5 1780 374 278 47 120 chrX 156752922 156753114 -9897182 - MTEb LTR MaLR -1 378 201 5 1780 264 59 0 0 chrX 156753116 156753150 -9897146 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 1780 843 49 8 0 chrX 156753203 156753325 -9896971 + L1Md_F2 LINE L1 6448 6570 -12 5 1780 963 213 22 62 chrX 156753403 156753590 -9896706 - B3 SINE B2 0 216 36 5 1780 1081 102 0 0 chrX 156753590 156753737 -9896559 - B1_Mus1 SINE Alu 0 148 2 5 1780 963 213 22 62 chrX 156753737 156753774 -9896522 - B3 SINE B2 -181 35 1 5 1780 291 258 40 40 chrX 156754130 156754231 -9896065 - RMER15 LTR ERVL -105 470 370 5 1780 741 254 34 0 chrX 156754287 156754464 -9895832 - Lx8 LINE L1 -303 7170 6988 5 1780 329 353 39 26 chrX 156754529 156754683 -9895613 + MLT1I LTR MaLR 46 201 -210 5 1780 470 359 55 19 chrX 156754781 156755196 -9895100 + L1ME2 LINE L1 5734 6163 -1 5 1780 1095 40 47 0 chrX 156755411 156755559 -9894737 + L1Md_A LINE L1 6427 6581 -1 5 1780 370 227 93 0 chrX 156755714 156755789 -9894507 - ID4 SINE ID 0 83 2 5 1780 1065 240 141 16 chrX 156756004 156756317 -9893979 + ORR1E LTR MaLR 4 355 -4 5 1780 225 197 30 76 chrX 156757386 156757452 -9892844 + ID4 SINE ID 11 73 -10 5 1780 429 187 0 0 chrX 156757453 156757587 -9892709 + (CAGAGA)n Simple_repeat Simple_repeat 4 137 0 5 1780 922 276 11 84 chrX 156757601 156757886 -9892410 + B4A SINE B4 29 292 0 5 1780 604 96 43 0 chrX 156758934 156759049 -9891247 + (TA)n Simple_repeat Simple_repeat 2 121 0 5 1780 536 306 188 69 chrX 156759055 156759444 -9890852 + L1MC4 LINE L1 6695 7129 -913 5 1780 1097 259 103 9 chrX 156759477 156759827 -9890469 - L1ME3A LINE L1 -290 5883 5501 5 1780 1953 246 88 19 chrX 156759991 156760721 -9889575 - Lx6 LINE L1 -26 7434 6455 5 1780 886 153 0 0 chrX 156761486 156761617 -9888679 - B1_Mus2 SINE Alu -16 131 1 5 1781 477 189 100 36 chrX 156762702 156762812 -9887484 - ID_B1 SINE B4 -8 216 100 5 1781 245 217 0 0 chrX 156762933 156762979 -9887317 - B1F SINE Alu -73 76 31 5 1781 1195 48 7 0 chrX 156763004 156763150 -9887146 - B1_Mus2 SINE Alu 0 147 1 5 1781 236 329 0 0 chrX 156764837 156764904 -9885392 - MTEa LTR MaLR -98 281 215 5 1781 528 16 0 0 chrX 156764904 156764965 -9885331 + (GA)n Simple_repeat Simple_repeat 1 61 0 5 1781 698 272 313 0 chrX 156764965 156765128 -9885168 - MTEa LTR MaLR -165 214 1 5 1781 2797 69 0 0 chrX 156765161 156765507 -9884789 - ORR1A1 LTR MaLR 0 346 1 5 1781 11536 129 21 50 chrX 156765507 156767530 -9882766 - ORR1A1-int LTR MaLR 0 1963 1 5 1781 2651 54 42 6 chrX 156767530 156767864 -9882432 - ORR1A1 LTR MaLR 0 346 1 5 1781 199 154 31 0 chrX 156768170 156768235 -9882061 + (CA)n Simple_repeat Simple_repeat 2 68 0 5 1781 191 246 29 44 chrX 156768238 156768306 -9881990 - MIRc SINE MIR -124 144 78 5 1781 935 307 60 18 chrX 156768372 156768754 -9881542 - MLT1A1 LTR MaLR -1 407 10 5 1781 961 310 39 7 chrX 156768992 156769271 -9881025 + B4 SINE B4 1 288 -4 5 1781 570 67 0 0 chrX 156769287 156769362 -9880934 + (CA)n Simple_repeat Simple_repeat 1 75 0 5 1781 208 227 0 0 chrX 156769365 156769409 -9880887 + GA-rich Low_complexity Low_complexity 1 44 0 5 1781 3349 52 29 0 chrX 156771389 156771797 -9878499 - L1_Mm LINE L1 -89 5794 5375 5 1781 6505 58 1 0 chrX 156771795 156772598 -9877698 + L1Md_F2 LINE L1 4783 5586 -297 5 1781 8290 43 2 2 chrX 156772599 156773594 -9876702 + L1Md_F2 LINE L1 5588 6582 0 5 1781 269 204 119 79 chrX 156773609 156773710 -9876586 - LTR82B Low_complexity ERVL -682 148 44 5 1781 424 300 124 30 chrX 156773802 156774036 -9876260 + LTR79 LTR ERVL 256 511 -16 5 1781 1176 252 50 6 chrX 156774421 156774740 -9875556 - MLT1A0 LTR MaLR 0 365 33 5 1781 865 169 151 10 chrX 156775167 156775359 -9874937 + Lx5 LINE L1 6832 7050 0 5 1781 244 209 90 0 chrX 156775385 156775452 -9874844 + B3A SINE B2 1 73 -125 5 1781 246 238 108 70 chrX 156775806 156775837 -9874459 + MER96B DNA hAT 78 109 -308 5 1781 288 0 0 0 chrX 156775837 156775869 -9874427 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 5 1781 246 238 108 70 chrX 156775869 156776022 -9874274 + MER96B DNA hAT 110 268 -149 5 1781 181 298 99 58 chrX 156776297 156776418 -9873878 + MIR SINE MIR 48 173 -89 5 1781 270 0 0 0 chrX 156777645 156777675 -9872621 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 1781 393 234 16 98 chrX 156778491 156778536 -9871760 - B3A SINE B2 -2 196 159 5 1781 444 82 0 0 chrX 156778536 156778597 -9871699 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 1781 393 234 16 98 chrX 156778597 156778674 -9871622 - B3A SINE B2 -40 158 84 5 1781 387 0 0 0 chrX 156778783 156778826 -9871470 + (TC)n Simple_repeat Simple_repeat 1 43 0 5 1781 432 0 0 0 chrX 156778826 156778873 -9871423 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1781 342 354 61 15 chrX 156779454 156779781 -9870515 - L1ME4a LINE L1 -238 5886 5545 5 1781 515 279 14 29 chrX 156779927 156780067 -9870229 - B1F1 SINE Alu -11 138 1 5 1781 254 182 69 52 chrX 156780334 156780392 -9869904 + ID_B1 SINE B4 99 157 -67 5 1781 221 333 93 40 chrX 156780392 156780408 -9869888 + B1F2 SINE Alu 18 95 -54 5 1781 808 125 104 22 chrX 156780408 156780570 -9869726 - L1Md_F2 LINE L1 -1 6635 6423 5 1781 302 336 16 41 chrX 156780801 156780922 -9869374 - RSINE1 SINE B4 -4 161 44 5 1781 366 23 0 0 chrX 156781041 156781084 -9869212 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 5 1781 468 324 31 36 chrX 156781588 156781783 -9868513 + B3A SINE B2 3 196 -2 5 1781 191 310 0 33 chrX 156781809 156781869 -9868427 + MER5B DNA MER1_type 21 78 -100 5 1781 552 219 231 0 chrX 156782514 156782683 -9867613 + MER3 DNA MER1_type 1 208 -1 5 1781 5789 68 1 10 chrX 156783875 156784269 -9866027 - L1_Mus1 LINE L1 -1 6566 6179 5 1781 6719 58 4 36 chrX 156784269 156785099 -9865197 - RLTR13B4 LTR ERVK 0 803 1 5 1781 5789 68 1 10 chrX 156785099 156785413 -9864883 - L1_Mus1 LINE L1 -389 6178 5864 5 1781 3825 87 8 4 chrX 156785969 156786465 -9863831 - L1_Mus3 LINE L1 -6 6632 6135 5 1781 224 299 0 69 chrX 156787622 156787633 -9862663 + B4 SINE B4 80 85 -207 5 1781 381 230 103 0 chrX 156787633 156787720 -9862576 + PB1D10 SINE Alu 1 96 -21 5 1781 231 178 0 43 chrX 156787734 156787781 -9862515 + GA-rich Low_complexity Low_complexity 3 47 0 5 1781 1447 238 94 23 chrX 156788140 156788492 -9861804 - MTEa LTR MaLR -2 377 1 5 1781 732 284 19 19 chrX 156788774 156788986 -9861310 - B3 SINE B2 0 216 5 5 1781 248 77 26 0 chrX 156789539 156789578 -9860718 + (TCTCC)n Simple_repeat Simple_repeat 3 42 0 5 1781 326 336 0 36 chrX 156789634 156789745 -9860551 - B1F SINE Alu -40 109 3 5 1781 209 320 26 0 chrX 156789979 156790057 -9860239 + CT-rich Low_complexity Low_complexity 6 85 0 5 1781 409 260 173 31 chrX 156790516 156790646 -9859650 - RMER21B LTR ERV1 -278 564 415 5 1781 216 0 0 0 chrX 156790646 156790670 -9859626 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 1781 409 261 180 36 chrX 156790670 156790798 -9859498 - RMER21B LTR ERV1 -409 538 307 5 1781 183 273 0 22 chrX 156791153 156791198 -9859098 - MIRm SINE MIR -134 142 99 5 1781 180 0 0 0 chrX 156792016 156792036 -9858260 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1781 388 307 21 35 chrX 156792072 156792214 -9858082 - LTR16C LTR ERVL 0 489 350 5 1781 1834 289 80 46 chrX 156792301 156793098 -9857198 - Lx8 LINE L1 -3 7470 6647 6 1781 508 224 9 9 chrX 156793098 156793206 -9857090 - Lx8 LINE L1 -775 6698 6591 6 1781 320 307 0 13 chrX 156793566 156793642 -9856654 - tRNA-Ala-GCY_ tRNA tRNA 0 75 1 6 1781 323 250 0 0 chrX 156793588 156793648 -9856648 - ID4_ SINE ID -23 60 1 6 1781 194 250 0 19 chrX 156794522 156794575 -9855721 - MIRm SINE MIR -15 261 210 6 1781 250 322 33 22 chrX 156794823 156794915 -9855381 - MIR SINE MIR -127 135 43 6 1781 3276 161 30 36 chrX 156795020 156795660 -9854636 - Lx9 LINE L1 -1 7643 7008 6 1781 749 172 75 62 chrX 156795630 156795791 -9854505 - Lx9 LINE L1 -747 6897 6735 6 1781 2294 112 12 58 chrX 156795794 156796137 -9854159 + ORR1A2 LTR MaLR 1 327 0 6 1781 1031 263 22 40 chrX 156796329 156796606 -9853690 - B4 SINE B4 -18 274 3 6 1781 21 0 0 0 chrX 156796703 156796724 -9853572 + AT_rich Low_complexity Low_complexity 1 21 0 6 1781 1167 153 112 10 chrX 156796733 156796938 -9853358 - URR1A DNA MER1_type 0 226 1 6 1781 207 262 62 47 chrX 156797012 156797076 -9853220 + L2a LINE L2 3362 3426 0 6 1781 970 185 20 44 chrX 156797232 156797436 -9852860 - MTD LTR MaLR -15 404 206 6 1781 427 294 247 4 chrX 156797462 156797701 -9852595 - MT2A LTR ERVL -152 381 85 6 1781 340 328 88 0 chrX 156797649 156797774 -9852522 - MTD LTR MaLR -243 136 1 6 1781 492 18 0 0 chrX 156797824 156797881 -9852415 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 1781 477 259 58 15 chrX 156797887 156798024 -9852272 - RSINE1 SINE B4 -18 147 5 6 1781 654 299 0 7 chrX 156799856 156800001 -9850295 - ID_B1 SINE B4 0 224 81 6 1781 255 386 0 46 chrX 156799865 156800017 -9850279 + YREP_Mm Unknown Unknown 186 330 -1482 6 1781 229 254 176 15 chrX 156800109 156800177 -9850119 + ID4_ SINE ID 3 81 -2 6 1781 699 254 101 16 chrX 156800119 156800307 -9849989 + ID_B1 SINE B4 21 224 0 6 1781 336 130 0 0 chrX 156800428 156800482 -9849814 + PB1D9 SINE Alu 2 55 -65 6 1781 604 185 0 9 chrX 156800522 156800631 -9849665 + B1_Mur4 SINE Alu 43 150 0 6 1781 243 0 0 0 chrX 156800716 156800743 -9849553 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 1781 350 300 61 15 chrX 156801113 156801245 -9849051 + MER58B DNA MER1_type 117 254 -87 6 1781 6829 125 28 12 chrX 156801335 156802449 -9847847 + MusHAL1 LINE L1 560 1691 -1021 6 1781 443 241 0 0 chrX 156802759 156802838 -9847458 - ID4_ SINE ID -4 79 1 6 1781 1066 242 29 5 chrX 156802921 156803129 -9847167 + ID_B1 SINE B4 3 215 -9 6 1781 441 0 0 0 chrX 156803155 156803204 -9847092 + (GGAA)n Simple_repeat Simple_repeat 3 51 0 6 1781 325 173 39 48 chrX 156803241 156803344 -9846952 + Lx7 LINE L1 7594 7695 -1 6 1781 335 165 0 12 chrX 156803402 156803488 -9846808 + (TA)n Simple_repeat Simple_repeat 2 86 0 6 1781 325 234 0 0 chrX 156803999 156804063 -9846233 - 4.5SRNA scRNA scRNA -20 74 11 6 1781 492 252 8 0 chrX 156804063 156804182 -9846114 - Lx9 LINE L1 -766 6878 6759 6 1781 3073 43 3 0 chrX 156804183 156804528 -9845768 - ORR1A0 LTR MaLR 0 346 1 6 1781 15168 47 12 0 chrX 156804528 156806298 -9843998 - ORR1A0-int LTR MaLR 0 1792 1 6 1781 434 38 0 0 chrX 156806298 156806351 -9843945 - ORR1A0 LTR MaLR 0 346 294 6 1781 259 56 0 0 chrX 156806344 156806380 -9843916 - ORR1A0 LTR MaLR -310 36 1 6 1781 1189 282 25 6 chrX 156806380 156806701 -9843595 - Lx9 LINE L1 -882 6762 6436 6 1781 966 244 42 5 chrX 156807212 156807426 -9842870 + ID_B1 SINE B4 1 222 -2 6 1781 873 231 5 57 chrX 156808998 156809191 -9841105 + ID_B1 SINE B4 3 185 -39 6 1781 5338 89 24 6 chrX 156809191 156809895 -9840401 + L1_Mus4 LINE L1 5920 6636 0 6 1781 30 45 0 0 chrX 156809971 156810015 -9840281 + AT_rich Low_complexity Low_complexity 1 44 0 6 1781 294 200 9 37 chrX 156810608 156810717 -9839579 + GA-rich Low_complexity Low_complexity 2 107 0 6 1781 672 125 0 0 chrX 156810738 156810834 -9839462 + ORR1D1 LTR MaLR 1 96 -278 6 1781 268 221 116 162 chrX 156810862 156811035 -9839261 + L1M4 LINE L1 4496 4660 -1486 6 1781 1284 278 82 2 chrX 156811018 156811618 -9838678 - L1M4 LINE L1 -479 5699 5058 6 1781 584 260 24 94 chrX 156811623 156811793 -9838503 + RSINE1 SINE B4 8 165 0 6 1781 1941 181 30 66 chrX 156811840 156812307 -9837989 - RMER4A LTR ERVK 0 466 17 6 1781 1490 236 109 71 chrX 156812330 156812979 -9837317 - L1M4 LINE L1 -1096 5050 4377 6 1781 604 231 79 3 chrX 156812994 156813124 -9837172 - ID_B1 SINE B4 -11 213 81 6 1781 313 320 141 29 chrX 156813405 156813682 -9836614 + LTR48 LTR ERV1 480 787 0 6 1781 529 221 113 42 chrX 156813682 156813824 -9836472 - MER20 DNA MER1_type -66 153 2 6 1781 234 0 0 0 chrX 156814869 156814895 -9835401 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 1781 597 28 0 0 chrX 156815339 156815410 -9834886 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 6 1781 708 224 79 18 chrX 156816327 156816491 -9833805 - B3A SINE B2 -24 174 1 6 1781 265 278 13 40 chrX 156816544 156816619 -9833677 - MER5A1 DNA MER1_type -93 73 1 6 1781 357 255 67 19 chrX 156816624 156816728 -9833568 - MIRb SINE MIR -63 205 97 6 1781 264 274 208 0 chrX 156816795 156816901 -9833395 + MER5B DNA MER1_type 32 159 -19 6 1781 315 257 13 13 chrX 156817141 156817216 -9833080 + RMER15 LTR ERVL 403 477 -98 6 1781 200 163 23 0 chrX 156817368 156817411 -9832885 + (CAA)n Simple_repeat Simple_repeat 2 45 0 6 1781 1049 256 145 6 chrX 156817569 156817887 -9832409 - MTD LTR MaLR -16 403 42 6 1781 589 337 49 45 chrX 156818301 156818609 -9831687 + MLT1K LTR MaLR 281 589 -6 6 1781 592 314 57 6 chrX 156818671 156818847 -9831449 + MER5A DNA MER1_type 4 188 -1 6 1781 559 301 7 0 chrX 156819834 156819980 -9830316 - ID_B1 SINE B4 0 224 78 6 1781 425 284 99 59 chrX 156819988 156820209 -9830087 - L2a LINE L2 -18 3408 3179 6 1781 416 248 49 10 chrX 156821353 156821455 -9828841 + MER5A1 DNA MER1_type 23 128 -38 6 1781 264 257 43 0 chrX 156821481 156821551 -9828745 - ID SINE ID -148 76 4 6 1781 549 290 77 0 chrX 156821637 156821786 -9828510 - MLT1A0 LTR MaLR 0 365 205 6 1781 297 85 26 0 chrX 156821786 156821839 -9828457 - MTC LTR MaLR 0 419 351 6 1781 1783 113 117 44 chrX 156821945 156822286 -9828010 - ORR1B1 LTR MaLR 0 394 29 6 1781 2463 129 14 0 chrX 156822328 156822693 -9827603 - MTC LTR MaLR -51 370 1 6 1781 273 250 312 0 chrX 156822721 156822833 -9827463 + L1MC4a LINE L1 7129 7275 -607 6 1781 333 0 0 0 chrX 156822970 156823007 -9827289 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1781 323 266 70 9 chrX 156823971 156824085 -9826211 + MLT1I LTR MaLR 285 405 -6 6 1781 492 230 19 19 chrX 156824164 156824319 -9825977 - Lx9 LINE L1 -13 7631 7477 6 1781 549 217 158 38 chrX 156824546 156824704 -9825592 - Lx9 LINE L1 -175 7469 7293 6 1781 537 262 8 0 chrX 156824716 156824838 -9825458 - ID_B1 SINE B4 -3 221 99 6 1781 396 59 0 0 chrX 156824842 156824893 -9825403 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1781 274 402 0 42 chrX 156824899 156824995 -9825301 - B1F1 SINE Alu -55 94 3 6 1781 214 239 94 18 chrX 156825309 156825405 -9824891 - MIRm SINE MIR -127 149 37 6 1781 429 20 0 0 chrX 156826289 156826339 -9823957 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1781 375 291 54 59 chrX 156826472 156826658 -9823638 - L1ME3A LINE L1 -42 6131 5947 6 1781 567 62 0 0 chrX 156826788 156826868 -9823428 + (CCA)n Simple_repeat Simple_repeat 3 82 0 6 1781 321 267 0 85 chrX 156826879 156826961 -9823335 - ID4 SINE ID -4 79 5 6 1781 458 207 41 57 chrX 156826975 156827098 -9823198 - B1F SINE Alu -5 144 24 6 1781 534 290 88 4 chrX 156827121 156827360 -9822936 - L1ME3A LINE L1 -410 5763 5505 6 1781 216 206 16 16 chrX 156828467 156828531 -9821765 + (CCCCG)n Simple_repeat Simple_repeat 4 67 0 6 1781 21 36 0 0 chrX 156828567 156828595 -9821701 + GC_rich Low_complexity Low_complexity 1 28 0 6 1781 645 158 58 8 chrX 156829405 156829526 -9820770 - MER5A1 DNA MER1_type -26 140 14 6 1781 297 263 141 0 chrX 156829781 156829880 -9820416 + MER45A DNA Tip100 66 178 0 6 1781 836 93 8 0 chrX 156830092 156830210 -9820086 - L1_Mur2 LINE L1 -1339 4538 4420 6 1781 689 254 0 0 chrX 156830242 156830376 -9819920 + ID_B1 SINE B4 83 216 -8 6 1781 380 236 177 6 chrX 156831357 156831415 -9818881 - L1ME1 LINE L1 -15 6164 6093 6 1781 1291 124 6 0 chrX 156831415 156831593 -9818703 - B2_Mm1t SINE B2 -14 179 1 6 1781 413 291 119 25 chrX 156831593 156832055 -9818241 - L1ME1 LINE L1 -87 6092 5550 6 1781 258 269 0 0 chrX 156832077 156832129 -9818167 - tRNA-Ala-GCA tRNA tRNA -7 68 17 6 1781 342 0 0 0 chrX 156832435 156832473 -9817823 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1781 198 0 0 0 chrX 156832473 156832494 -9817802 + (CG)n Simple_repeat Simple_repeat 1 22 0 6 1781 516 32 0 0 chrX 156832494 156832555 -9817741 + (GA)n Simple_repeat Simple_repeat 1 62 0 6 1781 706 333 89 18 chrX 156832796 156833243 -9817053 - L1ME1 LINE L1 -902 5244 4766 6 1781 691 237 61 104 chrX 156833251 156833482 -9816814 - ID_B1 SINE B4 0 224 4 6 1781 259 309 141 16 chrX 156834191 156834382 -9815914 - MER112 DNA MER1_type -1 260 46 6 1781 543 299 13 13 chrX 156834443 156834599 -9815697 + RSINE1 SINE B4 1 156 -9 6 1781 21 36 0 0 chrX 156834689 156834717 -9815579 + AT_rich Low_complexity Low_complexity 1 28 0 6 1781 189 0 0 0 chrX 156835034 156835055 -9815241 + (CCTG)n Simple_repeat Simple_repeat 2 22 0 6 1781 239 359 116 44 chrX 156835063 156835407 -9814889 + L2a LINE L2 3051 3419 -7 6 1781 832 176 66 12 chrX 156835563 156835730 -9814566 + URR1A DNA MER1_type 32 207 -19 6 1781 389 244 89 39 chrX 156835570 156835749 -9814547 - CYRA11_Mm Unknown Y-chromosome -264 353 166 6 1781 527 250 56 12 chrX 156835826 156835993 -9814303 - MIR SINE MIR -54 208 39 6 1781 392 205 25 13 chrX 156836018 156836097 -9814199 + RSINE1 SINE B4 18 97 -68 6 1781 471 250 154 0 chrX 156836165 156836301 -9813995 + MER20 DNA MER1_type 43 199 -20 6 1781 232 296 91 10 chrX 156836408 156836507 -9813789 + L2 LINE L2 1338 1444 -1975 6 1781 698 277 26 19 chrX 156836763 156837028 -9813268 - L1MC4 LINE L1 -39 8003 7737 6 1781 247 304 0 0 chrX 156837155 156837224 -9813072 + CT-rich Low_complexity Low_complexity 2 70 0 7 1781 352 211 222 0 chrX 156837232 156837322 -9812974 - PB1D9 SINE Alu -2 118 9 7 1781 721 279 5 56 chrX 156837410 156837626 -9812670 - ID_B1 SINE B4 -18 206 2 7 1781 785 233 154 47 chrX 156837640 156838126 -9812170 - L1MC4 LINE L1 -507 7535 6998 6 1781 358 278 0 0 chrX 156838153 156838225 -9812071 - ID4 SINE ID -10 73 2 7 1781 1390 212 41 16 chrX 156838507 156838823 -9811473 - Lx6 LINE L1 -1 7459 7136 7 1781 1207 61 0 0 chrX 156838825 156838972 -9811324 + B1_Mus1 SINE Alu 2 148 0 7 1781 212 0 36 0 chrX 156838972 156839000 -9811296 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 7 1781 11779 152 65 75 chrX 156839015 156842596 -9807700 - Lx6 LINE L1 -896 6564 3043 7 1781 879 160 6 6 chrX 156842592 156842774 -9807522 - Lx6 LINE L1 -3374 2506 2325 7 1781 648 180 33 0 chrX 156842769 156842919 -9807377 - Lx6 LINE L1 -4464 1416 1262 7 1781 265 218 0 68 chrX 156843263 156843322 -9806974 - PB1D10 SINE Alu -58 59 5 7 1781 276 100 0 0 chrX 156843490 156843530 -9806766 + (CTTA)n Simple_repeat Simple_repeat 4 43 0 7 1781 218 346 10 78 chrX 156843604 156843630 -9806666 - B2_Mm2 SINE B2 -1 194 5 7 1781 523 319 0 101 chrX 156843630 156843808 -9806488 - RSINE1 SINE B4 0 165 6 7 1781 378 0 0 0 chrX 156843976 156844018 -9806278 + (TC)n Simple_repeat Simple_repeat 2 43 0 7 1781 315 0 0 0 chrX 156844018 156844052 -9806244 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1781 1310 93 33 0 chrX 156844674 156844856 -9805440 - B2_Mm1t SINE B2 -4 189 2 7 1781 590 311 163 30 chrX 156844887 156845328 -9804968 - L1ME3A LINE L1 -6 6167 5668 7 1781 485 274 78 7 chrX 156846026 156846180 -9804116 - MER5A1 DNA MER1_type -1 165 1 7 1781 225 94 0 0 chrX 156846497 156846529 -9803767 + (TCTG)n Simple_repeat Simple_repeat 3 34 0 7 1781 297 323 53 23 chrX 156846594 156846727 -9803569 + LTR16C LTR ERVL 260 396 -93 7 1781 1146 177 9 43 chrX 156847161 156847391 -9802905 + URR1A DNA MER1_type 5 226 0 7 1781 823 257 98 90 chrX 156847970 156848316 -9801980 - MLT1A LTR MaLR -25 349 1 7 1781 234 361 97 16 chrX 156848751 156848875 -9801421 + Tigger14a DNA MER2_type 17 150 -174 7 1781 306 0 0 0 chrX 156849275 156849309 -9800987 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1781 1057 270 96 36 chrX 156849422 156849596 -9800700 - MTE2a LTR MaLR -5 374 192 7 1781 234 0 0 0 chrX 156849596 156849622 -9800674 + (CTTG)n Simple_repeat Simple_repeat 1 26 0 7 1781 1057 270 96 36 chrX 156849622 156849781 -9800515 - MTE2a LTR MaLR -188 191 22 7 1781 2047 109 21 48 chrX 156849781 156849920 -9800376 - Lx3C LINE L1 -1007 5969 5842 7 1781 1603 47 0 0 chrX 156849920 156850112 -9800184 - B2_Mm1t SINE B2 0 193 2 7 1781 2047 109 21 48 chrX 156850112 156850182 -9800114 - Lx3C LINE L1 -1135 5841 5770 7 1781 194 0 39 0 chrX 156850189 156850215 -9800081 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1781 1163 62 0 7 chrX 156850215 156850353 -9799943 - B1_Mm SINE Alu -9 138 1 7 1781 2047 109 21 48 chrX 156850353 156850517 -9799779 - Lx3C LINE L1 -1207 5769 5605 7 1781 245 313 163 27 chrX 156850861 156851045 -9799251 - L2a LINE L2 -27 3399 3191 7 1781 386 335 80 12 chrX 156851077 156851240 -9799056 + MER58A DNA MER1_type 1 174 -50 7 1781 369 286 17 27 chrX 156851575 156851713 -9798583 + MIR SINE MIR 3 138 -130 7 1781 207 0 0 0 chrX 156851933 156851956 -9798340 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 7 1781 916 243 9 23 chrX 156852252 156852471 -9797825 - B3 SINE B2 0 216 1 7 1781 345 290 25 99 chrX 156853504 156853665 -9796631 + L2b LINE L2 3225 3373 -2 7 1781 328 261 0 0 chrX 156854462 156854527 -9795769 + tRNA-Ala-GCA tRNA tRNA 1 65 -10 7 1781 189 0 0 0 chrX 156854527 156854548 -9795748 + (CAA)n Simple_repeat Simple_repeat 3 23 0 7 1781 22 0 0 0 chrX 156854552 156854574 -9795722 + AT_rich Low_complexity Low_complexity 1 22 0 7 1781 372 331 33 78 chrX 156854749 156854994 -9795302 - MIR SINE MIR -19 243 13 7 1781 272 302 61 30 chrX 156855158 156855257 -9795039 - B3 SINE B2 -6 210 109 7 1781 313 202 13 0 chrX 156855257 156855336 -9794960 + Lx5 LINE L1 6928 7007 -43 7 1781 573 15 0 0 chrX 156855352 156855418 -9794878 + (GA)n Simple_repeat Simple_repeat 1 66 0 7 1781 402 237 33 66 chrX 156855418 156855540 -9794756 - B3A SINE B2 -80 118 1 7 1781 408 228 59 0 chrX 156855550 156855651 -9794645 - PB1D10 SINE Alu -7 110 4 7 1781 279 342 35 47 chrX 156855878 156856047 -9794249 - LTR82A LTR ERVL -566 306 140 7 1781 933 280 17 98 chrX 156857318 156857726 -9792570 - MTEa LTR MaLR -4 375 1 7 1781 315 336 83 30 chrX 156857900 156858032 -9792264 + MER58A DNA MER1_type 86 224 0 7 1781 22 0 0 0 chrX 156858047 156858069 -9792227 + AT_rich Low_complexity Low_complexity 1 22 0 7 1781 1337 96 5 5 chrX 156858758 156858946 -9791350 - B2_Mm2 SINE B2 -7 188 1 7 1781 616 276 28 0 chrX 156859166 156859311 -9790985 + B1F SINE Alu 1 149 0 7 1781 1206 61 0 0 chrX 156859316 156859464 -9790832 + B1_Mus1 SINE Alu 1 148 0 7 1781 1215 156 9 39 chrX 156859752 156859985 -9790311 + URR1A DNA MER1_type 1 226 0 7 1781 211 225 13 53 chrX 156861184 156861259 -9789037 + GA-rich Low_complexity Low_complexity 3 74 0 7 1781 852 268 61 113 chrX 156861302 156861681 -9788615 - ORR1E LTR MaLR 0 359 1 7 1781 460 330 72 31 chrX 156861686 156862103 -9788193 - MLT1H LTR MaLR -38 511 3 7 1781 359 298 16 16 chrX 156863055 156863083 -9787213 + polypyrimidine Low_complexity Low_complexity 102 130 0 7 1781 875 262 0 36 chrX 156863083 156863305 -9786991 - ID_B1 SINE B4 -10 214 1 7 1781 359 298 16 16 chrX 156863305 156863402 -9786894 + polypyrimidine Low_complexity Low_complexity 5 101 0 7 1781 205 372 11 0 chrX 156863558 156863652 -9786644 + GA-rich Low_complexity Low_complexity 4 98 0 7 1781 348 24 0 0 chrX 156865784 156865825 -9784471 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1781 689 235 6 6 chrX 156866110 156866290 -9784006 - Lx9 LINE L1 -156 7488 7309 7 1781 21 82 0 0 chrX 156866319 156866368 -9783928 + AT_rich Low_complexity Low_complexity 1 49 0 7 1781 1340 256 3 34 chrX 156867581 156867905 -9782391 - MTE2b LTR MaLR -8 371 58 7 1781 448 276 0 0 chrX 156867905 156868003 -9782293 - MTE2b LTR MaLR -281 98 1 7 1781 185 65 32 0 chrX 156868886 156868917 -9781379 + (TTTCC)n Simple_repeat Simple_repeat 2 33 0 7 1781 598 229 45 125 chrX 156869451 156869651 -9780645 - MTE2a LTR MaLR -195 184 1 7 1781 200 420 30 0 chrX 156869947 156870047 -9780249 + L2b LINE L2 3259 3361 -14 7 1781 287 303 103 27 chrX 156870142 156870288 -9780008 - MIR SINE MIR -41 227 64 7 1781 1173 22 0 0 chrX 156870923 156871060 -9779236 + B1_Mus2 SINE Alu 2 138 -9 7 1781 315 0 0 0 chrX 156871060 156871095 -9779201 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1781 245 333 0 0 chrX 156871207 156871276 -9779020 + (CGTG)n Simple_repeat Simple_repeat 1 69 0 7 1781 690 312 210 20 chrX 156871319 156871915 -9778381 - L1MEe LINE L1 -2509 3637 2929 7 1781 386 289 73 77 chrX 156871941 156871998 -9778298 - L1MEe LINE L1 -3773 2393 2340 7 1781 465 294 30 97 chrX 156871998 156872235 -9778061 - ID_B1 SINE B4 -1 223 3 7 1781 386 289 73 77 chrX 156872235 156872424 -9777872 - L1MEe LINE L1 -3827 2339 2148 7 1781 392 211 0 72 chrX 156872702 156872799 -9777497 + PB1 SINE Alu 33 122 -5 7 1781 28 0 0 0 chrX 156872886 156872914 -9777382 + AT_rich Low_complexity Low_complexity 1 28 0 7 1781 324 0 0 0 chrX 156873000 156873036 -9777260 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 1781 633 224 7 56 chrX 156873059 156873201 -9777095 - ID_B1 SINE B4 -4 220 86 7 1781 483 262 165 28 chrX 156873353 156873695 -9776601 - L1MEe LINE L1 -4557 1609 1185 7 1781 958 133 14 0 chrX 156874554 156874697 -9775599 - B1_Mur3 SINE Alu -3 146 2 7 1781 837 142 0 0 chrX 156874754 156874895 -9775401 + (TC)n Simple_repeat Simple_repeat 2 142 0 7 1781 201 326 152 16 chrX 156875008 156875192 -9775104 - MIR SINE MIR -5 257 49 7 1781 625 232 38 56 chrX 156876294 156876454 -9773842 - RSINE1 SINE B4 0 165 9 7 1781 228 122 0 0 chrX 156876564 156876605 -9773691 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1781 355 266 0 81 chrX 156876605 156876691 -9773605 - RSINE1 SINE B4 -44 121 43 7 1781 538 226 257 8 chrX 156876716 156876953 -9773343 - L1MB4 LINE L1 -46 6134 5839 7 1781 328 26 0 0 chrX 156876970 156877008 -9773288 - HAL1-3A_ME LINE L1 -846 2012 1975 7 1781 549 135 0 0 chrX 156877008 156877097 -9773199 + (TA)n Simple_repeat Simple_repeat 2 90 0 7 1781 1540 234 141 23 chrX 156877097 156878011 -9772285 - L1MB4 LINE L1 -343 5837 4806 7 1781 364 317 77 0 chrX 156878230 156878334 -9771962 - ID_B1 SINE B4 -32 192 81 7 1781 251 222 63 0 chrX 156878495 156878558 -9771738 + PB1D10 SINE Alu 35 101 -16 7 1781 236 355 68 23 chrX 156878588 156878764 -9771532 + LTR16E2 LTR ERVL 320 503 -65 7 1781 329 329 72 0 chrX 156879036 156879188 -9771108 - MIRb SINE MIR -26 242 80 7 1781 1395 164 37 19 chrX 156880281 156880549 -9769747 + Lx5 LINE L1 6774 7046 -4 7 1781 1288 292 20 0 chrX 156881013 156881311 -9768985 - MTE2b LTR MaLR -71 308 5 7 1781 236 351 0 0 chrX 156881539 156881613 -9768683 - ID4 SINE ID -8 75 2 7 1781 861 211 29 5 chrX 156882019 156882224 -9768072 - Lx6 LINE L1 0 7460 7251 7 1781 779 169 37 0 chrX 156882243 156882379 -9767917 - B1_Mus2 SINE Alu -6 141 1 7 1781 239 159 23 0 chrX 156882765 156882809 -9767487 - MER5B DNA MER1_type -4 174 130 7 1781 1581 89 138 0 chrX 156882827 156883074 -9767222 + Lx3_Mus LINE L1 6729 7009 0 7 1781 239 372 10 10 chrX 156883251 156883354 -9766942 - MER5B DNA MER1_type -48 130 28 7 1781 249 182 0 0 chrX 156883584 156883628 -9766668 - ID4 SINE ID -39 44 1 7 1781 24 32 0 0 chrX 156883638 156883669 -9766627 + AT_rich Low_complexity Low_complexity 1 31 0 7 1781 214 336 43 17 chrX 156884099 156884214 -9766082 - MIRc SINE MIR -142 126 9 7 1781 576 100 178 0 chrX 156885375 156885465 -9764831 + B1_Mus1 SINE Alu 33 138 -10 7 1781 2532 262 115 28 chrX 156886097 156887278 -9763018 - Lx9 LINE L1 -20 7624 6200 7 1781 857 128 7 14 chrX 156887294 156887437 -9762859 + B1_Mur4 SINE Alu 9 150 0 7 1781 317 330 45 80 chrX 156887464 156887665 -9762631 + MLT1J1 LTR MaLR 201 394 -50 8 1781 214 268 213 31 chrX 156887953 156888080 -9762216 + MIR SINE MIR 91 240 -22 8 1781 412 245 46 127 chrX 156888100 156888273 -9762023 + MER3 DNA MER1_type 1 159 -50 8 1781 181 57 0 54 chrX 156888347 156888384 -9761912 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 8 1781 227 200 0 0 chrX 156888386 156888426 -9761870 - MER3 DNA MER1_type -135 74 35 8 1781 192 77 0 0 chrX 156888513 156888539 -9761757 + (TC)n Simple_repeat Simple_repeat 2 27 0 8 1781 672 375 89 34 chrX 156888556 156889003 -9761293 - MLT2F LTR ERVL -54 609 138 8 1781 372 354 41 75 chrX 156889973 156890099 -9760197 + LTR33A LTR ERVL 50 170 -350 8 1781 399 73 0 0 chrX 156890099 156890154 -9760142 + (TG)n Simple_repeat Simple_repeat 1 55 0 8 1781 372 354 41 75 chrX 156890154 156890293 -9760003 + LTR33A LTR ERVL 171 306 -214 8 1781 305 203 0 92 chrX 156890406 156890417 -9759879 - ID2 SINE ID 0 83 75 8 1781 381 58 0 0 chrX 156890417 156890469 -9759827 + (TATG)n Simple_repeat Simple_repeat 2 53 0 8 1781 305 203 0 92 chrX 156890469 156890522 -9759774 - ID2 SINE ID -9 74 25 8 1781 560 281 148 65 chrX 156890666 156890944 -9759352 + MLT1A0 LTR MaLR 1 301 -64 8 1781 727 284 75 27 chrX 156890968 156891156 -9759140 - B3 SINE B2 -5 211 15 8 1781 782 299 128 34 chrX 156891396 156891868 -9758428 + MLT1E2 LTR MaLR 104 627 0 8 1781 582 244 8 0 chrX 156892740 156892859 -9757437 + B3 SINE B2 28 147 -69 8 1781 607 286 32 37 chrX 156892857 156893046 -9757250 - B4A SINE B4 -104 188 1 8 1782 885 230 3 151 chrX 156893386 156893724 -9756572 + B4A SINE B4 5 292 0 8 1782 200 376 32 21 chrX 156894467 156894562 -9755734 - MIRc SINE MIR -90 178 83 8 1782 261 0 0 0 chrX 156894777 156894806 -9755490 + (TC)n Simple_repeat Simple_repeat 2 30 0 8 1782 790 104 9 0 chrX 156894806 156894921 -9755375 - B1_Mus2 SINE Alu -2 145 30 8 1782 558 230 39 83 chrX 156894950 156895130 -9755166 + MIR SINE MIR 32 203 -59 8 1782 1165 152 66 0 chrX 156895295 156895506 -9754790 + URR1B DNA MER1_type 1 225 0 8 1782 180 175 30 30 chrX 156896282 156896382 -9753914 + (TATATG)n Simple_repeat Simple_repeat 2 101 0 8 1782 283 312 0 0 chrX 156897832 156897896 -9752400 - PB1D10 SINE Alu -42 75 12 8 1782 230 352 0 27 chrX 156897855 156897928 -9752368 - ID_B1 SINE B4 -91 133 63 8 1782 835 141 74 0 chrX 156898221 156898356 -9751940 - B1_Mus1 SINE Alu -2 146 2 8 1782 1272 27 0 0 chrX 156898498 156898644 -9751652 + B1_Mus2 SINE Alu 2 147 0 8 1782 1129 249 99 9 chrX 156898666 156898990 -9751306 - Lx8 LINE L1 -139 7334 6982 8 1782 26 50 0 0 chrX 156898994 156899034 -9751262 + AT_rich Low_complexity Low_complexity 1 40 0 8 1782 333 68 0 0 chrX 156899701 156899745 -9750551 + (TA)n Simple_repeat Simple_repeat 2 45 0 8 1782 493 276 46 53 chrX 156899868 156900151 -9750145 - L1M5 LINE L1 -367 5757 5477 8 1782 214 319 67 33 chrX 156901429 156901549 -9748747 - L2c LINE L2 -13 3374 3251 8 1782 252 0 0 0 chrX 156901581 156901609 -9748687 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 8 1782 247 333 0 14 chrX 156901609 156901679 -9748617 - tRNA-Ala-GCY_ tRNA tRNA -6 69 1 8 1782 586 296 52 11 chrX 156901877 156902051 -9748245 + MER58A DNA MER1_type 31 211 -13 8 1782 28 29 0 0 chrX 156903428 156903463 -9746833 + AT_rich Low_complexity Low_complexity 1 35 0 8 1782 510 263 43 21 chrX 156904472 156904653 -9745643 + B3A SINE B2 2 187 -8 8 1782 403 256 0 0 chrX 156904746 156904828 -9745468 + ID4 SINE ID 2 83 0 8 1782 324 0 0 0 chrX 156905458 156905494 -9744802 + (TA)n Simple_repeat Simple_repeat 1 36 0 8 1782 782 136 53 8 chrX 156905503 156905636 -9744660 - B2_Mm2 SINE B2 -56 139 1 8 1782 309 26 0 0 chrX 156905833 156905871 -9744425 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 1782 243 0 0 0 chrX 156905910 156905937 -9744359 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 1782 288 0 0 0 chrX 156906045 156906077 -9744219 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 1782 297 0 0 0 chrX 156906122 156906155 -9744141 + (TG)n Simple_repeat Simple_repeat 2 34 0 8 1782 306 0 0 0 chrX 156906197 156906231 -9744065 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 1782 288 0 0 0 chrX 156906404 156906436 -9743860 + (TC)n Simple_repeat Simple_repeat 1 32 0 8 1782 306 0 0 0 chrX 156906436 156906469 -9743827 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 1782 26 30 0 0 chrX 156906714 156906747 -9743549 + AT_rich Low_complexity Low_complexity 1 33 0 8 1782 352 262 0 0 chrX 156908062 156908146 -9742150 - RMER30 DNA MER1_type -7 195 112 8 1782 306 329 0 0 chrX 156908298 156908377 -9741919 - RMER30 DNA MER1_type -119 83 5 8 1782 673 218 34 27 chrX 156908443 156908589 -9741707 + B1_Mur2 SINE Alu 3 149 0 8 1782 766 259 59 5 chrX 156908934 156909136 -9741160 - MER20 DNA MER1_type 0 219 7 8 1782 207 0 0 0 chrX 156909754 156909777 -9740519 + (TTA)n Simple_repeat Simple_repeat 2 24 0 8 1782 407 339 86 41 chrX 156909836 156910128 -9740168 + L3 LINE CR1 4180 4484 -5 8 1782 284 96 39 0 chrX 156910172 156910224 -9740072 + (TATG)n Simple_repeat Simple_repeat 4 57 0 8 1782 3972 53 0 18 chrX 156910611 156911114 -9739182 + L1Md_F2 LINE L1 6085 6578 -4 8 1782 360 0 0 0 chrX 156911600 156911640 -9738656 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 8 1782 402 21 0 0 chrX 156911852 156911899 -9738397 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1782 219 188 0 0 chrX 156911928 156911976 -9738320 + (TA)n Simple_repeat Simple_repeat 2 49 0 8 1782 1513 219 112 101 chrX 156911993 156912450 -9737846 - MT2A LTR ERVL -66 467 6 8 1782 976 202 92 12 chrX 156912918 156913169 -9737127 - L1MA8 LINE L1 -165 6126 5856 8 1782 234 0 0 0 chrX 156913270 156913296 -9737000 + (TA)n Simple_repeat Simple_repeat 2 27 0 8 1782 378 0 0 0 chrX 156913515 156913557 -9736739 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 8 1782 288 0 0 0 chrX 156913591 156913623 -9736673 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 8 1782 203 238 0 0 chrX 156914003 156914045 -9736251 - MER5B DNA MER1_type -42 136 95 8 1782 486 227 35 53 chrX 156914056 156914184 -9736112 + B1F1 SINE Alu 24 148 -1 8 1782 293 145 0 83 chrX 156914243 156914303 -9735993 + B1_Mur4 SINE Alu 5 59 -91 8 1782 293 0 130 0 chrX 156914307 156914384 -9735912 + (CAGG)n Simple_repeat Simple_repeat 2 88 0 8 1782 511 139 97 19 chrX 156914387 156914490 -9735806 + B1_Mur4 SINE Alu 40 150 0 8 1782 225 0 0 0 chrX 156915524 156915549 -9734747 + (A)n Simple_repeat Simple_repeat 1 25 0 8 1782 819 305 34 29 chrX 156916466 156916862 -9733434 - L1ME2 LINE L1 -199 5980 5585 8 1782 1191 119 17 11 chrX 156917314 156917492 -9732804 + B2_Mm2 SINE B2 1 179 -16 8 1782 558 29 0 0 chrX 156917492 156917560 -9732736 + (GAAA)n Simple_repeat Simple_repeat 2 69 0 8 1782 252 189 94 0 chrX 156918448 156918501 -9731795 + MT2B LTR ERVL 183 240 -361 8 1782 266 0 29 0 chrX 156918521 156918555 -9731741 + (TAA)n Simple_repeat Simple_repeat 2 36 0 8 1782 305 256 26 0 chrX 156918574 156918652 -9731644 + ID4_ SINE ID 4 83 0 8 1782 459 0 0 0 chrX 156918714 156918765 -9731531 + (TG)n Simple_repeat Simple_repeat 1 51 0 8 1782 998 122 202 0 chrX 156918924 156919112 -9731184 - URR1A DNA MER1_type 0 226 1 8 1782 389 272 86 25 chrX 156919784 156919946 -9730350 - MIR SINE MIR -7 255 84 8 1782 481 222 10 0 chrX 156920614 156920713 -9729583 + MER5A DNA MER1_type 7 106 -83 8 1782 278 186 37 0 chrX 156920727 156920791 -9729505 - ID4 SINE ID -76 76 11 8 1782 247 191 0 0 chrX 156921600 156921647 -9728649 - ID4_ SINE ID -34 49 3 8 1782 269 300 144 0 chrX 156921816 156921906 -9728390 + MIRb SINE MIR 6 111 -157 8 1782 236 229 99 14 chrX 156922333 156922404 -9727892 + L2c LINE L2 3259 3335 -52 8 1782 987 264 131 57 chrX 156923032 156923382 -9726914 - MTE2b LTR MaLR -3 376 1 8 1782 205 376 42 17 chrX 156924032 156924151 -9726145 - L3 LINE CR1 -199 4290 4169 8 1782 235 274 97 0 chrX 156924625 156924687 -9725609 - ID4 SINE ID -13 70 3 8 1782 219 238 0 0 chrX 156924816 156924858 -9725438 + (TTG)n Simple_repeat Simple_repeat 2 43 0 8 1782 248 322 208 14 chrX 156925303 156925507 -9724789 - MLT1J1 LTR MaLR -208 240 3 8 1782 780 177 64 0 chrX 156926063 156926204 -9724092 + B1_Mur4 SINE Alu 1 150 0 8 1782 729 200 143 18 chrX 156926220 156926388 -9723908 - B3A SINE B2 -6 192 4 8 1782 23 0 0 0 chrX 156926486 156926509 -9723787 + AT_rich Low_complexity Low_complexity 1 23 0 8 1782 396 0 0 0 chrX 156927835 156927879 -9722417 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1782 311 298 107 0 chrX 156928062 156928146 -9722150 - B1F2 SINE Alu -27 122 30 8 1782 748 147 13 0 chrX 156929582 156929732 -9720564 + GA-rich Low_complexity Low_complexity 1 152 0 8 1782 557 280 84 49 chrX 156931583 156931846 -9718450 + B4A SINE B4 3 274 -18 8 1782 350 280 92 18 chrX 156932027 156932136 -9718160 - MER20 DNA MER1_type -73 146 30 8 1782 566 219 92 0 chrX 156932199 156932318 -9717978 + B3 SINE B2 1 130 -86 8 1782 31 44 0 0 chrX 156932355 156932400 -9717896 + AT_rich Low_complexity Low_complexity 1 45 0 8 1782 807 31 0 0 chrX 156932603 156932701 -9717595 + (TG)n Simple_repeat Simple_repeat 2 99 0 8 1782 262 329 50 32 chrX 156933286 156933397 -9716899 + MIRc SINE MIR 70 192 -76 8 1782 324 0 0 0 chrX 156933397 156933433 -9716863 + (TA)n Simple_repeat Simple_repeat 1 36 0 8 1782 259 348 98 35 chrX 156933433 156933464 -9716832 + MIRb SINE MIR 193 224 -44 8 1782 488 93 13 0 chrX 156934737 156934812 -9715484 + (GAAA)n Simple_repeat Simple_repeat 3 78 0 8 1782 21 36 0 0 chrX 156935923 156935951 -9714345 + AT_rich Low_complexity Low_complexity 1 28 0 8 1782 1172 195 5 0 chrX 156937273 156937478 -9712818 + B3 SINE B2 1 206 -10 8 1782 22 0 0 0 chrX 156937582 156937604 -9712692 + AT_rich Low_complexity Low_complexity 1 22 0 8 1782 2787 55 0 34 chrX 156937616 156937974 -9712322 - ORR1A1 LTR MaLR 0 346 1 9 1782 27 0 0 0 chrX 156937985 156938012 -9712284 + AT_rich Low_complexity Low_complexity 1 27 0 9 1782 300 274 45 45 chrX 156938066 156938154 -9712142 - PB1D10 SINE Alu -29 88 1 9 1782 549 259 7 20 chrX 156938818 156938964 -9711332 + B1F SINE Alu 1 144 -5 9 1782 300 236 70 0 chrX 156941734 156941818 -9708478 + BC1_Mm scRNA scRNA 4 92 -60 9 1782 681 305 66 22 chrX 156941861 156942179 -9708117 - MER46C DNA MER2_type -1 337 6 9 1782 506 229 95 0 chrX 156942425 156942530 -9707766 - B1_Mur1 SINE Alu -32 117 3 9 1782 1293 54 0 0 chrX 156944085 156944233 -9706063 + B1_Mus1 SINE Alu 1 148 0 9 1782 243 103 0 0 chrX 156944236 156944275 -9706021 + (A)n Simple_repeat Simple_repeat 1 39 0 9 1782 707 329 74 9 chrX 156944432 156944647 -9705649 + B4 SINE B4 2 230 -62 9 1782 971 139 21 0 chrX 156944704 156944848 -9705448 - B1_Mus1 SINE Alu 0 148 2 9 1782 3105 96 15 37 chrX 156944889 156945353 -9704943 - MT2B LTR ERVL 0 601 148 9 1782 267 256 97 24 chrX 156945271 156945395 -9704901 - ORR1A3-int LTR MaLR -1163 800 668 9 1782 454 297 9 18 chrX 156945684 156945797 -9704499 - PB1 SINE Alu -15 112 1 9 1782 6197 13 3 0 chrX 156945941 156946645 -9703651 + L1_Mm LINE L1 3768 4473 -1410 9 1782 344 203 14 0 chrX 156946746 156946820 -9703476 + PB1D10 SINE Alu 42 116 -1 9 1782 952 183 151 0 chrX 156947413 156947599 -9702697 - B3 SINE B2 -2 214 1 9 1782 1973 206 146 6 chrX 156947669 156948143 -9702153 + RMER4B LTR ERVK 1 540 -45 9 1782 5689 143 75 24 chrX 156948143 156949189 -9701107 - RLTR25A LTR ERVK 0 1103 5 9 1782 760 256 0 52 chrX 156949268 156949441 -9700855 + RSINE1 SINE B4 2 165 0 9 1782 402 245 132 35 chrX 156950275 156950389 -9699907 - RMER20B LTR ERVK -502 125 1 9 1782 1306 332 57 39 chrX 156950735 156951556 -9698740 - MERVK26-int LTR ERVK -313 6606 5771 9 1782 1870 32 0 0 chrX 156951799 156952017 -9698279 - L1Md_A LINE L1 -453 6129 5912 9 1782 3896 26 0 0 chrX 156952017 156952441 -9697855 + L1Md_A LINE L1 6159 6582 0 9 1782 623 278 67 54 chrX 156953050 156953274 -9697022 - MLT1K LTR MaLR 0 595 369 9 1782 21 0 0 0 chrX 156953294 156953315 -9696981 + AT_rich Low_complexity Low_complexity 1 21 0 9 1782 370 315 53 53 chrX 156953576 156953764 -9696532 - MTE2a LTR MaLR -15 364 177 9 1782 603 61 0 12 chrX 156953802 156953885 -9696411 + B1_Mur4 SINE Alu 68 149 -1 9 1782 255 253 67 33 chrX 156953908 156953998 -9696298 - MTE2a LTR MaLR -328 93 1 9 1782 296 261 31 0 chrX 156954075 156954140 -9696156 - ID4 SINE ID -15 68 2 9 1782 393 304 19 1 chrX 156955408 156955554 -9694742 - L1MD LINE L1 -1216 4927 4778 9 1782 232 245 19 0 chrX 156955553 156955606 -9694690 - L1MC LINE L1 -3678 2468 2415 9 1782 318 244 33 55 chrX 156956015 156956106 -9694190 + PB1D7 SINE Alu 22 110 -10 9 1782 503 243 181 23 chrX 156956288 156956465 -9693831 - MIR SINE MIR -41 221 17 9 1782 21 0 0 0 chrX 156956657 156956678 -9693618 + AT_rich Low_complexity Low_complexity 1 21 0 9 1782 21 0 0 0 chrX 156957525 156957546 -9692750 + AT_rich Low_complexity Low_complexity 1 21 0 9 1782 424 139 25 0 chrX 156957772 156957851 -9692445 - Lx7 LINE L1 0 7696 7616 9 1782 300 193 0 17 chrX 156958909 156958967 -9691329 - HAL1-3A_ME LINE L1 -827 2031 1975 9 1782 513 84 0 0 chrX 156958968 156959039 -9691257 + (TA)n Simple_repeat Simple_repeat 1 71 0 9 1782 217 156 85 43 chrX 156959156 156959203 -9691093 - ID4_ SINE ID -20 63 15 9 1782 1802 193 85 21 chrX 156959232 156959607 -9690689 + MTB_Mm LTR MaLR 1 399 -8 9 1782 21 0 0 0 chrX 156959854 156959875 -9690421 + AT_rich Low_complexity Low_complexity 1 21 0 9 1782 1221 126 42 0 chrX 156959902 156960093 -9690203 + Lx3B LINE L1 6772 6970 -3 9 1782 429 256 0 0 chrX 156960115 156960193 -9690103 + ID4_ SINE ID 2 79 -4 9 1782 292 289 108 8 chrX 156960197 156960326 -9689970 - L1MB8 LINE L1 -6 6172 6031 9 1782 845 238 56 56 chrX 156960337 156960551 -9689745 + B3 SINE B2 3 216 0 9 1782 318 209 109 11 chrX 156960557 156960649 -9689647 - L1MB8 LINE L1 -411 5773 5673 9 1782 183 333 96 61 chrX 156960774 156960889 -9689407 - MIRc SINE MIR -126 142 24 9 1782 309 274 82 75 chrX 156961726 156961860 -9688436 - MARNA DNA Mariner -49 537 403 9 1782 227 325 119 42 chrX 156961862 156962173 -9688123 - RMER17C LTR ERVK -49 361 27 9 1782 419 200 0 0 chrX 156962386 156962461 -9687835 + ID4_ SINE ID 9 83 0 9 1782 893 210 14 52 chrX 156962576 156962787 -9687509 - RMER10B LTR ERVL 0 398 196 9 1782 375 78 0 0 chrX 156962787 156962838 -9687458 + (GGA)n Simple_repeat Simple_repeat 3 53 0 9 1782 1155 169 15 48 chrX 156962840 156963108 -9687188 - RMER10B LTR ERVL -134 264 6 9 1782 203 133 0 22 chrX 156964034 156964080 -9686216 + CT-rich Low_complexity Low_complexity 1 45 0 9 1782 588 250 72 14 chrX 156964199 156964337 -9685959 + B1_Mur2 SINE Alu 3 148 -1 9 1782 366 310 53 11 chrX 156964947 156965136 -9685160 + MIR SINE MIR 65 261 -1 9 1782 455 333 33 0 chrX 156966073 156966223 -9684073 + RSINE1 SINE B4 11 165 0 9 1782 489 280 101 53 chrX 156967010 156967261 -9683035 - MLT1A LTR MaLR -23 351 77 9 1782 530 167 38 0 chrX 156967993 156968108 -9682188 - Lx9 LINE L1 -6 7638 7520 9 1782 375 119 0 0 chrX 156968108 156968175 -9682121 + (CA)n Simple_repeat Simple_repeat 1 67 0 9 1782 1642 126 29 0 chrX 156968175 156968423 -9681873 - Lx9 LINE L1 -125 7519 7219 9 1782 332 356 35 9 chrX 156969602 156969718 -9680578 + PB1 SINE Alu 2 120 -7 9 1782 4710 2 0 0 chrX 156969969 156970456 -9679840 - L1Md_A LINE L1 0 6582 6096 9 1782 233 352 13 76 chrX 156971087 156971244 -9679052 + MIRc SINE MIR 108 254 -14 9 1782 333 0 0 0 chrX 156971313 156971350 -9678946 + (TTG)n Simple_repeat Simple_repeat 2 38 0 9 1782 671 225 53 60 chrX 156971657 156971827 -9678469 + ID_B1 SINE B4 56 221 -3 9 1782 339 300 102 10 chrX 156972294 156972528 -9677768 + MIR SINE MIR 13 268 0 9 1782 41810 12 0 6 chrX 156972576 156978760 -9671536 - L1Md_A LINE L1 -1 6581 440 9 1782 234 227 12 74 chrX 156979695 156979776 -9670520 - Charlie4z DNA MER1_type -9 158 83 9 1782 1211 225 11 26 chrX 156979778 156980047 -9670249 + B4A SINE B4 28 292 0 9 1782 307 236 62 50 chrX 156980099 156980334 -9669962 + L1MA5 LINE L1 5711 5964 -336 9 1782 735 308 134 58 chrX 156982362 156982796 -9667500 - MLT1G1 LTR MaLR -2 577 111 9 1782 210 355 9 18 chrX 156982939 156983051 -9667245 + L2 LINE L2 2727 2837 -582 9 1782 412 275 97 128 chrX 156983052 156983373 -9666923 - ORR1E LTR MaLR -4 355 45 9 1782 2293 172 91 19 chrX 156983668 156984142 -9666154 - RMER5 LTR ERV1 -26 508 1 9 1782 228 261 82 82 chrX 156984840 156984986 -9665310 + YREP_Mm Unknown Unknown 151 296 -1516 9 1782 944 148 0 14 chrX 156984857 156985001 -9665295 - B1_Mus2 SINE Alu 0 147 6 9 1782 227 114 23 0 chrX 156985064 156985108 -9665188 + (TATATG)n Simple_repeat Simple_repeat 2 46 0 9 1782 303 268 0 35 chrX 156985303 156985388 -9664908 - ID4 SINE ID 0 83 2 9 1782 342 67 0 0 chrX 156985395 156985440 -9664856 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1782 817 291 37 20 chrX 156985446 156985692 -9664604 + Lx9 LINE L1 6359 6608 -1036 9 1782 339 44 0 0 chrX 156986051 156986096 -9664200 + (TG)n Simple_repeat Simple_repeat 1 45 0 9 1782 565 297 19 57 chrX 156986238 156986395 -9663901 - B4A SINE B4 0 292 142 9 1782 180 0 0 0 chrX 156986449 156986469 -9663827 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 9 1782 735 64 0 0 chrX 156986469 156986563 -9663733 - B1_Mus2 SINE Alu -13 134 41 9 1782 297 75 0 0 chrX 156986634 156986674 -9663622 + (A)n Simple_repeat Simple_repeat 1 40 0 9 1782 1325 165 47 0 chrX 156987895 156988107 -9662189 - URR1B DNA MER1_type 0 225 4 9 1782 279 0 0 0 chrX 156988485 156988516 -9661780 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 1782 272 170 21 0 chrX 156989077 156989124 -9661172 - MER91A DNA Tip100 0 196 149 9 1782 239 285 56 49 chrX 156989545 156989689 -9660607 - L1ME4a LINE L1 -12 6112 5968 9 1782 356 331 33 8 chrX 156991513 156991635 -9658661 + MIR3 SINE MIR 63 187 -21 9 1782 822 282 42 14 chrX 156992472 156992684 -9657612 + ID_B1 SINE B4 3 220 -4 9 1782 517 288 23 0 chrX 156993278 156993410 -9656886 - B1F1 SINE Alu 0 149 15 9 1782 258 266 127 75 chrX 156993852 156993986 -9656310 - B3A SINE B2 0 198 58 9 1782 408 297 151 8 chrX 156994099 156994218 -9656078 + RSINE1 SINE B4 1 136 -29 9 1782 483 237 49 142 chrX 156996503 156996665 -9653631 + B4 SINE B4 74 220 -72 9 1782 803 187 22 0 chrX 156996532 156996666 -9653630 + B1_Mur1 SINE Alu 8 144 -5 9 1782 346 242 192 25 chrX 156998898 156999101 -9651195 - L1MB2 LINE L1 -60 6111 5875 9 1782 329 302 12 0 chrX 157000025 157000111 -9650185 - ID_B1 SINE B4 -58 166 80 1 1782 589 272 7 0 chrX 157000362 157000498 -9649798 - ID_B1 SINE B4 -8 216 80 2 1782 1446 72 0 35 chrX 157001016 157001217 -9649079 + B2_Mm2 SINE B2 2 195 0 3 1782 577 260 0 0 chrX 157001386 157001509 -9648787 - RSINE1 SINE B4 -40 125 3 4 1782 469 276 166 15 chrX 157002329 157002733 -9647563 - HAL1 LINE L1 -6 2501 2037 5 1782 22 70 0 0 chrX 157002894 157002937 -9647359 + AT_rich Low_complexity Low_complexity 1 43 0 6 1782 590 267 53 0 chrX 157002954 157003104 -9647192 - RSINE1 SINE B4 -4 161 4 7 1782 554 137 63 28 chrX 157003126 157003269 -9647027 - Lx9 LINE L1 0 7644 7497 8 1782 237 263 137 0 chrX 157003313 157003408 -9646888 - L1MB8 LINE L1 -194 5984 5877 9 1782 4193 184 63 40 chrX 157003385 157003587 -9646709 - Lx9 LINE L1 -109 7535 7315 1 1782 207 0 0 0 chrX 157003587 157003610 -9646686 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1 1782 4193 184 63 40 chrX 157003610 157004345 -9645951 - Lx9 LINE L1 -330 7314 6577 1 1782 3725 207 41 76 chrX 157004337 157005366 -9644930 - L1_Rod LINE L1 -3915 1932 943 1 1782 837 30 0 0 chrX 157005366 157005466 -9644830 + (GA)n Simple_repeat Simple_repeat 1 100 0 1 1782 3725 215 23 45 chrX 157005466 157005925 -9644371 - L1_Rod LINE L1 -6666 942 496 1 1782 325 279 161 35 chrX 157005966 157006308 -9643988 - HAL1 LINE L1 -1057 1450 1066 5 1782 349 302 87 34 chrX 157006711 157006917 -9643379 - HAL1 LINE L1 -2029 478 262 5 1782 192 77 0 0 chrX 157006953 157006979 -9643317 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1782 16405 112 113 2 chrX 157007043 157012080 -9638216 - L1Md_F2 LINE L1 -3 6579 336 1 1782 373 282 103 16 chrX 157012241 157012367 -9637929 - B1F SINE Alu -1 148 12 1 1782 308 316 85 8 chrX 157012267 157012385 -9637911 - ID_B1 SINE B4 -23 201 75 1 1782 306 286 51 0 chrX 157012410 157012508 -9637788 + B4A SINE B4 1 103 -189 1 1782 359 351 23 0 chrX 157013099 157013230 -9637066 + B1F2 SINE Alu 1 134 -15 1 1782 257 273 26 0 chrX 157013434 157013511 -9636785 - L1ME3A LINE L1 -193 5980 5902 2 1782 959 275 91 23 chrX 157013850 157014192 -9636104 - MLT1A0 LTR MaLR 0 365 1 2 1782 189 402 18 30 chrX 157017902 157018071 -9632225 - L2 LINE L2 -508 2911 2745 2 1782 1004 229 24 5 chrX 157019475 157019686 -9630610 + B3 SINE B2 1 215 -1 2 1782 3710 47 0 18 chrX 157019924 157020381 -9629915 - L1_Mus1 LINE L1 -1 6566 6118 2 1782 2232 91 0 0 chrX 157020381 157020683 -9629613 + L1_Mus1 LINE L1 5834 6120 -447 2 1782 383 314 17 8 chrX 157021433 157021552 -9628744 - PB1 SINE Alu -7 120 1 2 1782 221 254 15 0 chrX 157022587 157022654 -9627642 - ID4_ SINE ID -14 69 2 2 1782 1102 159 54 36 chrX 157022692 157022914 -9627382 + URR1A DNA MER1_type 1 226 0 2 1782 400 256 0 0 chrX 157023107 157023189 -9627107 - ID4_ SINE ID 0 83 2 2 1783 509 269 102 6 chrX 157025027 157025203 -9625093 - MER20 DNA MER1_type 0 219 27 2 1783 498 17 0 0 chrX 157026782 157026841 -9623455 + (TG)n Simple_repeat Simple_repeat 1 59 0 3 1783 195 69 0 0 chrX 157027329 157027358 -9622938 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1783 31 26 0 0 chrX 157027386 157027424 -9622872 + AT_rich Low_complexity Low_complexity 1 38 0 3 1783 306 109 0 35 chrX 157027446 157027503 -9622793 - B2_Mm2 SINE B2 -94 101 47 3 1783 1202 81 23 0 chrX 157027569 157027741 -9622555 - B2_Mm2 SINE B2 -14 181 6 3 1783 315 71 0 0 chrX 157028423 157028465 -9621831 + (A)n Simple_repeat Simple_repeat 1 42 0 3 1783 772 228 5 58 chrX 157030394 157030585 -9619711 - B3A SINE B2 -16 182 2 3 1783 1167 61 0 0 chrX 157030692 157030839 -9619457 + B1_Mm SINE Alu 1 147 0 3 1783 219 23 93 0 chrX 157031381 157031424 -9618872 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 3 1783 15537 45 1 2 chrX 157031479 157034057 -9616239 - L1Md_F3 LINE L1 -1 6583 4008 3 1783 271 218 91 23 chrX 157034163 157034251 -9616045 + MIR SINE MIR 58 154 -54 4 1783 450 65 0 0 chrX 157034644 157034706 -9615590 + (TC)n Simple_repeat Simple_repeat 1 62 0 4 1783 451 352 25 67 chrX 157035553 157035836 -9614460 - B4A SINE B4 -20 272 2 4 1783 247 320 154 5 chrX 157037863 157038064 -9612232 - L2a LINE L2 -202 3224 2994 4 1783 193 281 0 15 chrX 157039648 157039713 -9610583 + MIR SINE MIR 101 164 -98 4 1783 253 250 50 0 chrX 157040362 157040442 -9609854 + B4A SINE B4 1 84 -208 4 1783 2501 131 164 2 chrX 157040497 157040949 -9609347 - RLTR24 LTR ERV1 -4 525 1 4 1783 899 18 9 0 chrX 157041107 157041216 -9609080 + (TC)n Simple_repeat Simple_repeat 1 110 0 4 1783 251 343 10 10 chrX 157041565 157041668 -9608628 + MIR SINE MIR 159 261 -1 4 1783 213 322 59 34 chrX 157042864 157042983 -9607313 + MIR SINE MIR 101 222 -40 4 1783 338 367 54 36 chrX 157043633 157043910 -9606386 - Charlie19a DNA Charlie -101 285 4 4 1783 3088 26 0 0 chrX 157044332 157044678 -9605618 + ORR1A0 LTR MaLR 1 346 0 5 1783 3321 31 8 3 chrX 157045002 157045394 -9604902 - MTA_Mm LTR MaLR -2 394 1 5 1783 8470 66 6 3 chrX 157045394 157046489 -9603807 - MTA_Mm-int LTR MaLR 0 1098 1 5 1783 1404 58 0 5 chrX 157046489 157046679 -9603617 - MTA_Mm LTR MaLR 0 400 212 5 1783 255 0 0 0 chrX 157046677 157046710 -9603586 + MTA_Mm-int LTR MaLR 1066 1098 0 5 1783 3350 25 2 30 chrX 157046710 157046902 -9603394 + MTA_Mm LTR MaLR 1 192 -204 5 1783 1630 47 0 0 chrX 157046902 157047095 -9603201 + B2_Mm1a SINE B2 1 193 0 5 1783 3350 25 2 30 chrX 157047095 157047309 -9602987 + MTA_Mm LTR MaLR 193 396 0 5 1783 234 202 94 125 chrX 157047312 157047408 -9602888 + MT2B LTR ERVL 149 241 -360 5 1783 490 252 22 30 chrX 157047336 157047471 -9602825 + B1F SINE Alu 14 147 -2 5 1783 248 222 73 12 chrX 157047532 157047614 -9602682 + PB1D9 SINE Alu 34 120 0 5 1783 21 0 0 0 chrX 157047772 157047793 -9602503 + AT_rich Low_complexity Low_complexity 1 21 0 5 1783 1017 210 53 5 chrX 157047874 157048080 -9602216 + B3 SINE B2 1 216 0 5 1783 694 309 83 4 chrX 157048376 157048642 -9601654 + B4A SINE B4 1 287 -5 5 1783 1996 273 140 25 chrX 157048853 157049582 -9600714 - MER21B LTR ERV1 -50 813 1 6 1783 252 252 82 25 chrX 157049756 157049878 -9600418 + MusHAL1 LINE L1 1664 1792 -920 6 1783 576 259 7 7 chrX 157050001 157050141 -9600155 + ID_B1 SINE B4 85 224 0 6 1783 590 230 6 86 chrX 157050223 157050385 -9599911 + ID_B1 SINE B4 2 150 -74 6 1783 500 224 30 53 chrX 157051427 157051559 -9598737 + B3A SINE B2 54 182 -16 6 1783 186 133 0 0 chrX 157051571 157051601 -9598695 + (CATG)n Simple_repeat Simple_repeat 3 32 0 6 1783 243 278 162 34 chrX 157052259 157052438 -9597858 - Lx8 LINE L1 -6 7467 7266 6 1783 531 229 7 25 chrX 157052470 157052596 -9597700 - B1_Mus2 SINE Alu -16 133 1 6 1783 322 319 43 43 chrX 157052596 157052611 -9597685 - B4 SINE B4 -82 210 70 6 1783 1461 50 39 0 chrX 157052660 157052842 -9597454 + B2_Mm2 SINE B2 2 190 -5 6 1783 244 196 20 0 chrX 157052856 157052907 -9597389 + MER5B DNA MER1_type 2 53 -125 7 1783 431 202 0 76 chrX 157053135 157053253 -9597043 + PB1D7 SINE Alu 11 119 -1 7 1783 22 35 0 0 chrX 157053558 157053587 -9596709 + AT_rich Low_complexity Low_complexity 1 29 0 7 1783 24 42 0 20 chrX 157054256 157054273 -9596023 + AT_rich Low_complexity Low_complexity 1 17 0 7 1783 1178 74 0 0 chrX 157054273 157054421 -9595875 + B1_Mus1 SINE Alu 1 148 0 7 1783 24 42 0 20 chrX 157054421 157054452 -9595844 + AT_rich Low_complexity Low_complexity 1 31 0 7 1783 344 229 135 0 chrX 157054665 157054761 -9595535 - PB1D10 SINE Alu -8 109 1 7 1783 1005 250 21 4 chrX 157055018 157055259 -9595037 - MTE2b LTR MaLR -134 245 1 7 1783 589 287 158 27 chrX 157055345 157055675 -9594621 + L1ME3A LINE L1 5685 6057 -116 7 1783 454 224 10 10 chrX 157055709 157055808 -9594488 - RSINE1 SINE B4 -2 163 65 7 1783 507 332 60 83 chrX 157056008 157056359 -9593937 - MLT1A LTR MaLR -21 353 11 8 1783 531 289 156 25 chrX 157056938 157057342 -9592954 + L1MEd LINE L1 49 505 -5631 8 1783 215 184 0 39 chrX 157057736 157057787 -9592509 + A-rich Low_complexity Low_complexity 2 50 0 8 1783 237 344 75 13 chrX 157058041 157058347 -9591949 + L1MEd LINE L1 4586 4910 -1236 8 1783 918 259 5 5 chrX 157058361 157058574 -9591722 + MER82 DNA MER2_type 177 389 -264 8 1783 249 196 0 0 chrX 157058578 157058629 -9591667 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1783 457 308 65 74 chrX 157058702 157058737 -9591559 + MTE2a LTR MaLR 114 152 -227 8 1783 856 165 197 0 chrX 157058737 157058925 -9591371 + URR1B DNA MER1_type 1 225 0 8 1783 457 258 31 126 chrX 157058925 157059133 -9591163 + MTE2a LTR MaLR 153 381 -26 8 1783 240 224 26 26 chrX 157059554 157059632 -9590664 + (CATATA)n Simple_repeat Simple_repeat 4 81 0 8 1783 275 316 0 17 chrX 157059763 157059879 -9590417 - L1MC LINE L1 -3667 2479 2366 8 1783 317 294 88 0 chrX 157059971 157060073 -9590223 + RMER5 LTR ERV1 70 180 -354 8 1783 693 270 78 35 chrX 157060185 157060442 -9589854 + RMER5 LTR ERV1 188 455 -79 8 1783 393 117 0 0 chrX 157062009 157062069 -9588227 + (TG)n Simple_repeat Simple_repeat 1 60 0 9 1783 443 336 7 60 chrX 157062081 157062230 -9588066 - RSINE1 SINE B4 -22 143 3 9 1783 346 246 0 14 chrX 157062330 157062404 -9587892 - ID4 SINE ID -9 74 2 9 1783 282 284 62 21 chrX 157062671 157062768 -9587528 - BC1_Mm scRNA scRNA -47 105 5 9 1783 254 288 76 0 chrX 157064202 157064268 -9586028 - ID4 SINE ID -11 72 2 9 1783 24 0 0 0 chrX 157064418 157064442 -9585854 + AT_rich Low_complexity Low_complexity 1 24 0 9 1783 396 59 0 0 chrX 157064495 157064546 -9585750 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 1783 365 275 0 0 chrX 157064560 157064640 -9585656 - ID_B1 SINE B4 -41 183 104 9 1783 1020 248 23 9 chrX 157064691 157064907 -9585389 + ID_B1 SINE B4 5 223 -1 9 1783 334 257 182 64 chrX 157064995 157065527 -9584769 - L1MEg LINE L1 -2279 3867 3273 9 1783 3408 40 0 0 chrX 157065785 157066181 -9584115 + MTA_Mm LTR MaLR 1 396 0 1 1783 9263 36 0 0 chrX 157066181 157067279 -9583017 + MTA_Mm-int LTR MaLR 1 1098 0 1 1783 3388 41 0 0 chrX 157067279 157067673 -9582623 + MTA_Mm LTR MaLR 1 394 -2 1 1783 299 247 45 80 chrX 157067692 157067780 -9582516 - 4.5SRNA scRNA scRNA -1 93 9 1 1783 372 188 72 0 chrX 157067714 157067783 -9582513 - B1F2 SINE Alu -69 80 7 1 1783 225 276 21 103 chrX 157067783 157067811 -9582485 - MT2B2 LTR ERVL -349 235 147 1 1783 367 355 35 12 chrX 157067883 157068137 -9582159 - L1MEg LINE L1 -3583 2563 2304 9 1783 399 315 112 28 chrX 157068160 157068516 -9581780 - L1MEg LINE L1 -4737 1505 1120 9 1783 361 253 0 0 chrX 157068537 157068612 -9581684 - B1F SINE Alu -4 145 71 1 1783 309 313 20 29 chrX 157068538 157068640 -9581656 - ID_B1 SINE B4 -5 219 119 1 1783 476 205 43 26 chrX 157068699 157068814 -9581482 - PB1D10 SINE Alu 0 117 1 1 1783 353 289 29 7 chrX 157068938 157069074 -9581222 - L1MEg LINE L1 -5297 839 701 9 1783 453 267 8 17 chrX 157069355 157069473 -9580823 - PB1D10 SINE Alu 0 117 1 1 1783 303 288 0 14 chrX 157070164 157070238 -9580058 - RSINE1 SINE B4 -14 151 79 1 1783 575 249 97 50 chrX 157070687 157071068 -9579228 + L1M4 LINE L1 2150 2548 -3598 1 1783 396 0 0 0 chrX 157072350 157072394 -9577902 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1783 1273 250 83 35 chrX 157072458 157072806 -9577490 + MTEa LTR MaLR 1 365 -14 1 1783 280 286 14 0 chrX 157073891 157073961 -9576335 - ID4 SINE ID -10 73 3 1 1783 1089 241 100 8 chrX 157074030 157074281 -9576015 - B4A SINE B4 -18 274 1 1 1783 243 146 0 0 chrX 157074942 157074983 -9575313 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1783 273 208 0 19 chrX 157075121 157075175 -9575121 + 4.5SRNA scRNA scRNA 32 84 -10 1 1783 333 286 0 0 chrX 157075128 157075205 -9575091 + PB1D10 SINE Alu 40 116 -1 1 1783 445 190 203 17 chrX 157075269 157075324 -9574972 + Lx9 LINE L1 7425 7502 -142 1 1783 494 16 16 0 chrX 157075324 157075387 -9574909 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 1 1783 445 190 203 17 chrX 157075387 157075398 -9574898 + Lx9 LINE L1 7503 7522 -122 1 1783 1334 139 23 5 chrX 157075398 157075614 -9574682 + URR1B DNA MER1_type 5 224 -1 1 1783 445 190 203 17 chrX 157075614 157075723 -9574573 + Lx9 LINE L1 7523 7633 -11 1 1783 4427 20 6 0 chrX 157076395 157076932 -9573364 - L1Md_T LINE L1 -209 6373 5834 1 1783 1412 70 0 0 chrX 157076932 157077117 -9573179 + L1Md_T LINE L1 6398 6582 0 1 1783 571 253 83 39 chrX 157077682 157077838 -9572458 - RSINE1 SINE B4 0 165 3 1 1783 539 343 63 46 chrX 157077916 157078200 -9572096 - MamGypLTR1b LTR Gypsy -17 765 477 1 1783 319 192 55 0 chrX 157078444 157078517 -9571779 + MER74B LTR ERVL 68 144 -478 1 1783 519 232 130 19 chrX 157080059 157080213 -9570083 + MER74A LTR ERVL 5 175 -383 1 1783 672 277 82 5 chrX 157080216 157080412 -9569884 - B3 SINE B2 -3 213 3 1 1783 313 320 76 51 chrX 157080412 157080566 -9569730 + MER74A LTR ERVL 221 378 -244 1 1783 833 114 0 0 chrX 157080599 157080730 -9569566 + Lx LINE L1 6203 6333 -321 1 1783 353 364 46 41 chrX 157080754 157080972 -9569324 + MER74A LTR ERVL 326 544 -14 1 1783 1122 95 0 0 chrX 157081463 157081610 -9568686 + B1_Mus1 SINE Alu 2 148 0 1 1783 208 147 0 0 chrX 157081623 157081657 -9568639 + (A)n Simple_repeat Simple_repeat 1 34 0 1 1783 499 193 92 0 chrX 157082024 157082133 -9568163 - B1_Mur1 SINE Alu -22 127 9 1 1783 935 199 28 0 chrX 157082278 157082454 -9567842 + ORR1D1 LTR MaLR 1 181 -193 1 1783 424 134 29 36 chrX 157082454 157082593 -9567703 + (TCTCTG)n Simple_repeat Simple_repeat 3 140 0 1 1783 324 175 0 0 chrX 157082590 157082653 -9567643 + CT-rich Low_complexity Low_complexity 3 65 0 1 1783 756 236 10 48 chrX 157082653 157082862 -9567434 + ORR1D1 LTR MaLR 174 374 -10 1 1783 721 203 201 10 chrX 157083530 157083729 -9566567 - MTD LTR MaLR 0 419 183 1 1783 256 131 0 21 chrX 157085024 157085071 -9565225 + Lx7 LINE L1 7637 7682 -14 1 1783 323 33 0 62 chrX 157085159 157085224 -9565072 + (CAAA)n Simple_repeat Simple_repeat 4 64 0 1 1783 2537 218 107 29 chrX 157086720 157087076 -9563220 + Lx7 LINE L1 6866 7245 -451 1 1783 1746 197 79 13 chrX 157087076 157087467 -9562829 + MTC LTR MaLR 5 421 0 1 1783 2537 218 107 29 chrX 157087467 157087880 -9562416 + Lx7 LINE L1 7246 7695 -1 1 1783 601 250 63 81 chrX 157087889 157088063 -9562233 + B3A SINE B2 27 197 -1 1 1783 229 258 0 31 chrX 157088106 157088170 -9562126 + A-rich Low_complexity Low_complexity 4 65 0 1 1783 206 156 22 0 chrX 157088177 157088222 -9562074 + GA-rich Low_complexity Low_complexity 4 49 0 1 1783 21 0 0 0 chrX 157088284 157088305 -9561991 + AT_rich Low_complexity Low_complexity 1 21 0 1 1783 731 249 80 12 chrX 157088339 157088502 -9561794 + B3A SINE B2 2 175 -23 1 1783 1015 103 109 0 chrX 157088502 157088667 -9561629 - B2_Mm2 SINE B2 -12 183 1 1 1783 1181 68 0 0 chrX 157089317 157089464 -9560832 + B1_Mus2 SINE Alu 1 147 0 1 1783 186 43 0 0 chrX 157089464 157089487 -9560809 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1783 27 49 0 0 chrX 157089511 157089552 -9560744 + AT_rich Low_complexity Low_complexity 1 41 0 1 1783 712 246 136 27 chrX 157089585 157089769 -9560527 + ID_B1 SINE B4 2 205 -19 1 1783 1801 132 66 26 chrX 157089837 157090025 -9560271 + MTC LTR MaLR 1 201 -220 1 1783 1327 84 19 10 chrX 157090025 157090230 -9560066 + Lx LINE L1 6448 6654 0 1 1783 1801 132 66 26 chrX 157090230 157090344 -9559952 + MTC LTR MaLR 202 315 -106 1 1783 1875 199 99 26 chrX 157090369 157090791 -9559505 + Lx5 LINE L1 6460 6912 -138 1 1783 335 189 61 31 chrX 157090884 157090982 -9559314 + Lx4B LINE L1 6958 7058 0 1 1783 205 306 0 0 chrX 157090985 157091070 -9559226 + A-rich Low_complexity Low_complexity 1 85 0 1 1783 285 98 0 0 chrX 157091153 157091194 -9559102 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1783 25 0 0 0 chrX 157091282 157091307 -9558989 + AT_rich Low_complexity Low_complexity 1 25 0 1 1783 36281 30 0 0 chrX 157091307 157097539 -9552757 - L1Md_T LINE L1 0 6585 257 1 1783 565 231 75 30 chrX 157097558 157097692 -9552604 + ID_B1 SINE B4 82 221 -3 1 1783 246 214 125 0 chrX 157097697 157097753 -9552543 + ID SINE ID 13 75 -149 1 1783 223 259 130 0 chrX 157097707 157097761 -9552535 + ID4 SINE ID 22 82 -1 1 1783 1324 60 48 21 chrX 157097927 157098114 -9552182 + B2_Mm2 SINE B2 1 192 -3 1 1783 677 82 0 48 chrX 157098117 157098220 -9552076 + BC1_Mm scRNA scRNA 1 98 -54 1 1783 961 288 37 22 chrX 157098257 157098530 -9551766 + MLT1F1 LTR MaLR 11 287 -282 1 1783 40 37 0 0 chrX 157098626 157098680 -9551616 + AT_rich Low_complexity Low_complexity 1 54 0 1 1783 541 289 86 8 chrX 157098966 157099221 -9551075 + B4A SINE B4 2 276 -16 1 1783 239 211 53 0 chrX 157099233 157099290 -9551006 + (CATG)n Simple_repeat Simple_repeat 3 62 0 1 1783 257 317 29 29 chrX 157101303 157101407 -9548889 + PB1D10 SINE Alu 3 106 -11 1 1783 1014 32 0 0 chrX 157101589 157101715 -9548581 + B1_Mm SINE Alu 22 147 0 1 1783 201 39 0 0 chrX 157101719 157101745 -9548551 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1783 276 356 35 0 chrX 157102125 157102240 -9548056 + B1F SINE Alu 22 140 -9 1 1783 416 222 0 0 chrX 157102263 157102335 -9547961 + ID4_ SINE ID 2 73 -10 1 1783 2058 199 43 11 chrX 157102602 157103039 -9547257 + Lx5 LINE L1 6595 7045 -5 1 1783 12385 144 59 10 chrX 157103348 157105778 -9544518 + L1_Mur2 LINE L1 2881 5429 -448 1 1783 334 130 0 0 chrX 157105781 157105835 -9544461 - Lx2 LINE L1 -700 6297 6244 1 1783 1386 84 0 30 chrX 157105843 157106040 -9544256 - B2_Mm2 SINE B2 -3 192 2 1 1783 297 75 0 0 chrX 157106238 157106278 -9544018 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 1783 315 0 0 0 chrX 157106496 157106531 -9543765 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 1783 468 51 0 0 chrX 157106531 157106589 -9543707 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 1783 261 306 111 10 chrX 157106591 157106690 -9543606 - B1F SINE Alu -21 128 20 1 1783 3507 98 41 2 chrX 157106699 157107232 -9543064 + Lx2 LINE L1 6090 6643 -354 1 1783 1369 119 0 0 chrX 157107232 157107442 -9542854 + Lx2 LINE L1 6775 6984 -13 1 1783 453 19 0 0 chrX 157109402 157109456 -9540840 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 1783 33 0 0 0 chrX 157109558 157109591 -9540705 + AT_rich Low_complexity Low_complexity 1 33 0 1 1783 951 100 49 28 chrX 157109598 157109742 -9540554 + B1_Mus1 SINE Alu 2 148 0 1 1783 313 328 139 21 chrX 157110779 157110971 -9539325 - MIRb SINE MIR -28 240 35 1 1783 465 34 0 0 chrX 157111231 157111290 -9539006 + (TTTTC)n Simple_repeat Simple_repeat 2 60 0 1 1783 4972 65 104 1 chrX 157111302 157111984 -9538312 - L1_Mus3 LINE L1 -7 6631 5880 1 1783 726 288 109 5 chrX 157112593 157112813 -9537483 + B4A SINE B4 50 292 0 1 1783 219 146 0 0 chrX 157112813 157112854 -9537442 + (CCA)n Simple_repeat Simple_repeat 1 41 0 1 1783 203 349 16 0 chrX 157113068 157113131 -9537165 + MIR SINE MIR 33 96 -112 1 1783 291 306 0 0 chrX 157113212 157113284 -9537012 + ID2 SINE ID 1 72 -11 1 1783 855 239 92 10 chrX 157115438 157115730 -9534566 + MER33 DNA MER1_type 2 317 -7 1 1783 363 258 10 70 chrX 157115883 157115983 -9534313 - PB1D7 SINE Alu -1 119 26 1 1783 565 279 43 0 chrX 157116034 157116174 -9534122 - RSINE1 SINE B4 -18 147 2 1 1783 431 118 12 0 chrX 157116666 157116751 -9533545 + (GA)n Simple_repeat Simple_repeat 1 86 0 1 1783 417 291 26 35 chrX 157116751 157116865 -9533431 - B1F2 SINE Alu -36 113 1 1 1783 801 218 7 0 chrX 157116884 157117026 -9533270 - B1_Mur2 SINE Alu -6 143 1 1 1783 770 214 21 0 chrX 157117240 157117385 -9532911 + B1_Mur3 SINE Alu 1 148 -1 1 1783 778 255 48 12 chrX 157117443 157117693 -9532603 + L1MB7 LINE L1 5769 6027 -157 1 1783 1423 92 0 10 chrX 157117895 157118092 -9532204 + B2_Mm2 SINE B2 1 195 0 1 1783 621 100 0 0 chrX 157118099 157118189 -9532107 + (GGAA)n Simple_repeat Simple_repeat 4 93 0 1 1783 1010 246 109 31 chrX 157118191 157118484 -9531812 - ORR1D1 LTR MaLR -58 316 1 2 1783 1010 222 109 9 chrX 157119131 157119481 -9530815 + L1MB7 LINE L1 2629 3013 -3133 2 1783 727 260 82 50 chrX 157119529 157119711 -9530585 + B3 SINE B2 2 189 -27 2 1783 433 250 76 70 chrX 157119740 157119925 -9530371 + L1MB7 LINE L1 3085 3270 -2876 2 1783 456 172 0 0 chrX 157119925 157120012 -9530284 + GA-rich Low_complexity Low_complexity 1 87 0 2 1783 1332 270 64 73 chrX 157120028 157120161 -9530135 + L1MB7 LINE L1 3282 3417 -2729 2 1783 2220 146 14 6 chrX 157120161 157120525 -9529771 - ORR1B2 LTR MaLR 0 367 1 2 1783 1332 270 64 73 chrX 157120525 157120639 -9529657 + L1MB7 LINE L1 3418 3526 -2620 2 1783 634 273 46 60 chrX 157120639 157120857 -9529439 + B3 SINE B2 2 216 0 2 1783 1332 270 64 73 chrX 157120857 157121440 -9528856 + L1MB7 LINE L1 3527 4105 -2041 2 1783 307 236 153 37 chrX 157121443 157121632 -9528664 + L1MB7 LINE L1 4985 5195 -951 2 1783 556 180 121 29 chrX 157121642 157121848 -9528448 + Lx9 LINE L1 7420 7644 0 2 1783 1383 241 124 40 chrX 157121852 157122428 -9527868 + L1MB7 LINE L1 5191 5828 -356 2 1783 1188 62 7 0 chrX 157122428 157122573 -9527723 + B1_Mus2 SINE Alu 2 147 0 2 1783 1383 266 136 52 chrX 157122573 157122897 -9527399 + L1MB7 LINE L1 5829 6163 -21 2 1783 387 0 0 0 chrX 157123544 157123587 -9526709 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2 1783 1137 43 7 7 chrX 157123592 157123734 -9526562 - B1_Mm SINE Alu -5 142 1 2 1783 35 0 0 0 chrX 157123902 157123937 -9526359 + AT_rich Low_complexity Low_complexity 1 35 0 2 1783 616 355 114 34 chrX 157124247 157124571 -9525725 + MLT1H LTR MaLR 1 350 -199 2 1783 4731 6 0 0 chrX 157125585 157126107 -9524189 + L1Md_A LINE L1 6061 6582 0 2 1783 226 203 31 15 chrX 157126297 157126362 -9523934 + (ATG)n Simple_repeat Simple_repeat 1 66 0 2 1783 193 229 0 0 chrX 157126365 157126400 -9523896 - MIR SINE MIR -19 243 209 2 1783 888 289 91 0 chrX 157126528 157126791 -9523505 - B4A SINE B4 -5 287 1 2 1783 693 282 9 53 chrX 157126824 157127049 -9523247 - Lx5 LINE L1 -7 7043 6829 2 1783 270 81 0 0 chrX 157127446 157127483 -9522813 + (T)n Simple_repeat Simple_repeat 1 37 0 2 1783 1232 54 0 0 chrX 157127483 157127630 -9522666 - B1_Mus2 SINE Alu 0 147 1 2 1783 949 257 5 0 chrX 157127744 157127954 -9522342 - B3 SINE B2 -5 211 1 2 1783 4245 67 3 28 chrX 157128312 157128892 -9521404 - Lx3_Mus LINE L1 -5 7004 6439 2 1783 680 281 16 22 chrX 157128995 157129177 -9521119 + B3A SINE B2 2 182 -16 2 1783 526 127 58 10 chrX 157129177 157129280 -9521016 + Lx2A LINE L1 6861 6968 -40 2 1783 447 75 0 0 chrX 157129284 157129351 -9520945 + Lx2A LINE L1 6930 6996 -12 2 1783 203 167 0 0 chrX 157129352 157129394 -9520902 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1783 574 318 74 26 chrX 157129723 157129952 -9520344 + LTR16A1 LTR ERVL 217 456 0 2 1783 961 229 28 5 chrX 157130033 157130244 -9520052 + B3 SINE B2 1 216 0 2 1783 673 297 94 26 chrX 157130624 157130890 -9519406 + B4 SINE B4 1 284 -8 2 1783 358 231 0 0 chrX 157130957 157131022 -9519274 + ID4_ SINE ID 4 68 -15 2 1783 504 137 10 19 chrX 157131290 157131394 -9518902 + GA-rich Low_complexity Low_complexity 3 105 0 2 1783 1258 222 40 12 chrX 157131909 157132160 -9518136 + MTD LTR MaLR 25 282 -137 2 1783 187 357 29 0 chrX 157132559 157132629 -9517667 - MIRc SINE MIR -113 155 84 2 1783 3188 56 0 0 chrX 157133086 157133481 -9516815 + L1_Mus2 LINE L1 6172 6566 0 2 1783 3053 283 55 40 chrX 157133503 157134142 -9516154 + Lx8 LINE L1 6285 6912 -561 2 1783 937 227 5 38 chrX 157134142 157134353 -9515943 - B3 SINE B2 -11 205 2 2 1783 3053 283 55 40 chrX 157134353 157134880 -9515416 + Lx8 LINE L1 6913 7468 -5 2 1783 488 284 86 154 chrX 157134952 157135185 -9515111 + ID_B1 SINE B4 8 224 0 2 1783 272 385 126 16 chrX 157135384 157135574 -9514722 + MIRb SINE MIR 36 246 -22 2 1783 976 164 74 5 chrX 157135766 157135968 -9514328 + Lx5 LINE L1 6824 7039 -11 2 1783 301 103 34 17 chrX 157135993 157136052 -9514244 + A-rich Low_complexity Low_complexity 2 61 0 2 1783 977 229 94 14 chrX 157136678 157136966 -9513330 - Lx6 LINE L1 -1327 6133 5823 2 1783 433 164 0 41 chrX 157136970 157137091 -9513205 - Lx7 LINE L1 -149 7547 7432 2 1783 399 262 39 16 chrX 157137672 157137800 -9512496 + B1F SINE Alu 2 132 -17 2 1783 378 0 0 0 chrX 157137806 157137848 -9512448 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 1783 309 26 0 0 chrX 157137848 157137885 -9512411 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1783 484 275 79 61 chrX 157137956 157138220 -9512076 + MLT1A1 LTR MaLR 116 408 0 2 1783 726 239 25 6 chrX 157138364 157138524 -9511772 - RSINE1 SINE B4 -1 164 2 2 1783 273 57 0 0 chrX 157138554 157138589 -9511707 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1783 284 293 67 0 chrX 157138610 157138685 -9511611 - B3A SINE B2 -42 156 77 2 1783 232 259 0 61 chrX 157138673 157138752 -9511544 + RMER17C LTR ERVK 175 250 -160 2 1783 183 71 71 0 chrX 157138752 157138794 -9511502 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 1783 232 259 0 61 chrX 157138794 157138829 -9511467 + RMER17C LTR ERVK 251 281 -129 2 1783 238 295 0 0 chrX 157138819 157138880 -9511416 - B3A SINE B2 -137 61 1 2 1783 342 375 17 7 chrX 157139110 157139289 -9511007 + MIR3 SINE MIR 3 183 -25 2 1783 301 258 0 12 chrX 157139481 157139570 -9510726 + ID4 SINE ID 10 95 -57 2 1783 311 250 143 0 chrX 157139751 157139835 -9510461 - ID_B1 SINE B4 -48 176 81 2 1783 415 255 90 0 chrX 157140257 157140402 -9509894 - L1MC4 LINE L1 -479 7563 7406 2 1783 950 236 19 37 chrX 157140403 157140619 -9509677 + B3 SINE B2 2 213 -3 2 1783 185 216 0 0 chrX 157141495 157141532 -9508764 - L3 LINE CR1 -201 4288 4252 2 1783 233 364 100 22 chrX 157142065 157142295 -9508001 - L2 LINE L2 -1123 2296 2049 2 1783 335 314 89 28 chrX 157142445 157142658 -9507638 + L1MC4 LINE L1 7763 7988 -54 2 1783 501 257 125 82 chrX 157142754 157143034 -9507262 + B4A SINE B4 1 292 0 2 1783 431 145 12 0 chrX 157143034 157143117 -9507179 + (CA)n Simple_repeat Simple_repeat 1 84 0 2 1783 424 315 9 9 chrX 157143817 157143929 -9506367 - B4A SINE B4 -85 207 96 2 1783 411 38 0 0 chrX 157143929 157143982 -9506314 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 1783 318 325 215 17 chrX 157143982 157144041 -9506255 - B4 SINE B4 -197 95 3 2 1783 759 290 63 59 chrX 157144459 157144697 -9505599 + B4 SINE B4 48 286 -6 2 1783 214 369 93 7 chrX 157144740 157144890 -9505406 + MIRb SINE MIR 29 191 -77 2 1783 23 0 0 0 chrX 157145133 157145156 -9505140 + AT_rich Low_complexity Low_complexity 1 23 0 2 1783 1000 234 9 35 chrX 157145364 157145594 -9504702 + ID_B1 SINE B4 1 224 0 2 1783 360 200 34 34 chrX 157145739 157145827 -9504469 + B1F SINE Alu 1 88 -61 2 1783 1787 138 61 45 chrX 157145834 157146146 -9504150 - ORR1A2 LTR MaLR -8 319 3 2 1783 847 253 71 47 chrX 157146851 157147257 -9503039 + L1_Mur3 LINE L1 855 1270 -6458 2 1783 229 57 0 0 chrX 157147259 157147294 -9503002 - L1Md_Gf LINE L1 -5538 984 950 2 1783 7042 53 1 0 chrX 157147294 157148167 -9502129 + L1Md_F2 LINE L1 5704 6577 -5 2 1783 400 178 5 147 chrX 157148199 157148321 -9501975 + L1_Mur3 LINE L1 1373 1487 -4393 2 1783 1187 68 0 0 chrX 157148321 157148468 -9501828 + B1_Mm SINE Alu 1 147 0 2 1783 400 178 5 147 chrX 157148468 157148529 -9501767 + L1_Mur3 LINE L1 1488 1530 -4350 2 1783 1730 49 18 0 chrX 157148504 157148713 -9501583 + L1_Mm LINE L1 5377 5586 -297 2 1783 8447 34 0 4 chrX 157148713 157149713 -9500583 + L1Md_F2 LINE L1 5587 6582 0 2 1783 1730 195 18 82 chrX 157149713 157149821 -9500475 + L1_Mm LINE L1 5587 5668 -632 2 1783 1138 88 0 0 chrX 157149821 157149968 -9500328 + B1_Mm SINE Alu 1 147 0 2 1783 290 220 18 96 chrX 157149968 157149999 -9500297 + L1_Mur3 LINE L1 1488 1517 -4363 2 1783 1322 158 7 7 chrX 157150010 157150297 -9499999 + L1_Mur3 LINE L1 1476 1762 -4118 2 1783 456 19 0 0 chrX 157150298 157150351 -9499945 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 1783 328 167 13 0 chrX 157150370 157150448 -9499848 + Lx7 LINE L1 7605 7683 -13 2 1783 581 285 31 12 chrX 157150462 157150622 -9499674 - MTEa LTR MaLR -212 167 5 2 1783 2842 60 32 0 chrX 157150704 157151074 -9499222 + L1_Mus2 LINE L1 6184 6565 -1 2 1783 412 269 306 7 chrX 157151080 157151503 -9498793 + L1MB7 LINE L1 4151 4699 -1447 2 1783 240 296 0 0 chrX 157152307 157152361 -9497935 - ID SINE ID -159 65 12 2 1783 384 232 84 34 chrX 157152439 157152617 -9497679 + L1MB7 LINE L1 4847 5033 -1113 2 1783 2156 82 40 21 chrX 157152721 157153047 -9497249 - Lx LINE L1 -2 6652 6321 2 1783 2984 88 2 2 chrX 157153326 157153726 -9496570 - MTB LTR MaLR 0 400 1 2 1783 1263 118 108 5 chrX 157153744 157153948 -9496348 - URR1A DNA MER1_type 0 226 2 2 1783 351 0 0 0 chrX 157154145 157154184 -9496112 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1783 360 352 0 0 chrX 157154393 157154501 -9495795 + RMER15 LTR ERVL 363 470 -105 2 1783 232 217 33 0 chrX 157154537 157154597 -9495699 + GA-rich Low_complexity Low_complexity 2 63 0 2 1783 493 229 148 0 chrX 157154672 157154794 -9495502 + ID_B1 SINE B4 81 220 -4 2 1783 1075 98 17 6 chrX 157154923 157155098 -9495198 + L1_Mus3 LINE L1 6462 6638 0 2 1783 480 256 68 23 chrX 157155177 157155309 -9494987 + B1F1 SINE Alu 6 143 -6 2 222 1604 273 62 36 chrX 157155319 157155977 -9494319 + L1MB7 LINE L1 5328 6002 -182 2 1784 386 277 20 0 chrX 157156002 157156103 -9494193 + L1MB7 LINE L1 6064 6166 -8 2 1784 915 204 37 16 chrX 157156353 157156542 -9493754 - B3A SINE B2 -1 197 5 2 1784 935 145 160 35 chrX 157158840 157159040 -9491256 - URR1B DNA MER1_type 0 225 1 2 1784 30373 77 14 17 chrX 157159100 157164062 -9486234 + L1Md_F2 LINE L1 415 5427 -456 2 1784 3101 64 2 5 chrX 157164062 157164470 -9485826 + L1Md_F2 LINE L1 6176 6582 0 2 1784 30373 72 4 16 chrX 157164470 157164684 -9485612 + L1Md_F2 LINE L1 5428 5575 -308 2 1784 7372 74 5 8 chrX 157164685 157165665 -9484631 + L1Md_F2 LINE L1 5587 6563 -19 2 1784 24 85 0 0 chrX 157165665 157165724 -9484572 + AT_rich Low_complexity Low_complexity 1 59 0 2 1784 758 238 106 30 chrX 157165874 157166073 -9484223 - ID_B1 SINE B4 0 224 11 2 1784 3146 150 24 114 chrX 157166370 157167002 -9483294 + RMER15 LTR ERVL 1 575 0 2 1784 212 264 50 76 chrX 157167002 157167098 -9483198 - L3 LINE CR1 -920 3569 3474 2 1784 276 266 94 21 chrX 157167330 157167426 -9482870 + MER5B DNA MER1_type 4 106 -72 3 1784 203 244 0 0 chrX 157167426 157167467 -9482829 - MER5B DNA MER1_type -46 132 92 3 1784 351 244 0 11 chrX 157167507 157167594 -9482702 + B4 SINE B4 1 86 -206 3 1784 521 292 0 27 chrX 157167648 157167796 -9482500 + B4 SINE B4 81 224 -68 3 1784 222 118 0 0 chrX 157167799 157167833 -9482463 + (CAA)n Simple_repeat Simple_repeat 3 36 0 3 1784 223 292 14 14 chrX 157167895 157167968 -9482328 + (CA)n Simple_repeat Simple_repeat 2 74 0 3 1784 314 275 0 12 chrX 157168428 157168509 -9481787 + ID4 SINE ID 1 80 -3 3 1784 201 47 22 44 chrX 157168576 157168621 -9481675 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 3 1784 807 240 75 0 chrX 157168717 157168917 -9481379 + B3 SINE B2 2 216 0 3 1784 279 0 0 0 chrX 157169006 157169037 -9481259 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 3 1784 223 314 0 0 chrX 157169125 157169176 -9481120 + B1F1 SINE Alu 1 51 -98 3 1784 525 272 47 20 chrX 157169534 157169684 -9480612 + RSINE1 SINE B4 2 155 -10 3 1784 24 0 0 0 chrX 157170232 157170256 -9480040 + AT_rich Low_complexity Low_complexity 1 24 0 3 1784 587 246 0 0 chrX 157172536 157172654 -9477642 + ID_B1 SINE B4 82 199 -25 3 1784 385 231 154 0 chrX 157172726 157172830 -9477466 + PB1D7 SINE Alu 1 120 0 3 1784 357 43 0 0 chrX 157173581 157173628 -9476668 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 1784 727 130 23 0 chrX 157174085 157174216 -9476080 - Lx2 LINE L1 -2 6995 6862 3 1784 272 316 134 30 chrX 157175011 157175243 -9475053 + L2c LINE L2 3124 3379 -8 3 1784 21 0 0 0 chrX 157175333 157175354 -9474942 + AT_rich Low_complexity Low_complexity 1 21 0 3 1784 408 246 41 18 chrX 157175606 157175776 -9474520 + Lx9 LINE L1 7470 7643 -1 3 1784 428 276 24 16 chrX 157175790 157175915 -9474381 + B1F1 SINE Alu 1 126 -23 3 1784 591 248 44 0 chrX 157176243 157176380 -9473916 + B1_Mur2 SINE Alu 2 144 -5 3 1784 826 256 211 16 chrX 157176456 157176769 -9473527 + ORR1D1 LTR MaLR 1 374 0 3 1784 1621 217 22 19 chrX 157177152 157177367 -9472929 - MTD LTR MaLR -3 416 202 3 1784 2470 61 0 0 chrX 157177367 157177679 -9472617 - L1Md_F2 LINE L1 -6 6576 6265 3 1784 1621 217 22 19 chrX 157177679 157177830 -9472466 - MTD LTR MaLR -218 201 50 3 1784 232 303 78 0 chrX 157177868 157178010 -9472286 + L1_Rod LINE L1 1686 1838 -4009 3 1784 652 224 75 0 chrX 157178067 157178201 -9472095 + B1_Mur2 SINE Alu 1 144 -5 3 1784 603 216 77 23 chrX 157178205 157178444 -9471852 + L1M3 LINE L1 4888 5132 -1011 3 1784 410 286 41 83 chrX 157178448 157178593 -9471703 + ID_B1 SINE B4 80 218 -6 3 1784 215 241 114 53 chrX 157178799 157178913 -9471383 - L2c LINE L2 -137 3250 3130 3 1784 333 250 31 87 chrX 157179104 157179167 -9471129 + LTR16C LTR ERVL 370 428 -61 3 1784 750 174 26 65 chrX 157179167 157179321 -9470975 + B1_Mur2 SINE Alu 1 148 -1 3 1784 252 0 0 0 chrX 157179322 157179350 -9470946 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1784 333 250 31 87 chrX 157179350 157179411 -9470885 + LTR16C LTR ERVL 429 489 0 3 1784 27 49 0 0 chrX 157180296 157180337 -9469959 + AT_rich Low_complexity Low_complexity 1 41 0 3 1784 247 312 27 27 chrX 157180778 157180926 -9469370 + L1M2a LINE L1 1956 2103 -5065 3 1784 278 238 29 19 chrX 157180974 157181077 -9469219 + MusHAL1 LINE L1 344 447 -2265 3 1784 1227 180 50 57 chrX 157181082 157181263 -9469033 - ORR1D1 LTR MaLR 0 374 190 3 1784 231 36 0 0 chrX 157181263 157181291 -9469005 + (GGGA)n Simple_repeat Simple_repeat 2 29 0 3 1784 1227 199 53 68 chrX 157181291 157181450 -9468846 - ORR1D1 LTR MaLR -185 189 20 3 1784 455 145 37 0 chrX 157181492 157181588 -9468708 - ORR1D1 LTR MaLR -229 141 32 3 1784 729 312 97 2 chrX 157181690 157182146 -9468150 + L1_Mur3 LINE L1 1686 2184 -3696 3 1784 510 17 0 0 chrX 157182290 157182349 -9467947 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 1784 274 259 24 36 chrX 157182644 157182728 -9467568 + L1_Mur3 LINE L1 2182 2264 -3616 3 1784 490 333 52 10 chrX 157182747 157182940 -9467356 + MLT1F2 LTR MaLR 315 515 -45 3 1784 1565 208 42 9 chrX 157182940 157183270 -9467026 - MTD LTR MaLR 0 419 79 3 1784 326 304 31 67 chrX 157183752 157183946 -9466350 + RLTR23 LTR ERV1 244 430 0 3 1784 379 173 53 0 chrX 157183947 157184022 -9466274 - MTD LTR MaLR -338 81 3 3 1784 1717 39 0 14 chrX 157184065 157184273 -9466023 + L1Md_F2 LINE L1 5382 5586 -297 3 1784 8208 48 0 7 chrX 157184274 157185273 -9465023 + L1Md_F2 LINE L1 5588 6579 -3 3 1784 430 273 3 6 chrX 157185328 157185482 -9464814 + L1M5 LINE L1 5422 5574 -605 3 1784 694 240 88 33 chrX 157185493 157185708 -9464588 - MTD LTR MaLR 0 419 193 3 1784 1240 48 0 0 chrX 157185790 157185936 -9464360 - B1_Mus2 SINE Alu 0 147 2 3 1784 283 383 0 0 chrX 157186010 157186104 -9464192 + ID_B1 SINE B4 85 178 -46 3 1784 986 239 9 23 chrX 157186110 157186328 -9463968 + B3 SINE B2 2 216 0 3 1784 299 347 84 45 chrX 157186854 157187032 -9463264 - MER102a DNA MER1_type -56 274 90 3 1784 403 235 35 64 chrX 157187048 157187221 -9463075 - MER104 DNA Tc2 -3 178 11 3 1784 237 384 88 5 chrX 157187372 157187576 -9462720 - L2 LINE L2 -655 2764 2544 3 1784 293 250 131 28 chrX 157187586 157187693 -9462603 - L2c LINE L2 0 3387 3270 3 1784 648 234 65 7 chrX 157188598 157188736 -9461560 + RSINE1 SINE B4 3 148 -17 3 1784 207 100 0 0 chrX 157188760 157188790 -9461506 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1784 681 106 0 0 chrX 157189414 157189518 -9460778 + (TG)n Simple_repeat Simple_repeat 2 105 0 3 1784 27 29 0 0 chrX 157189748 157189782 -9460514 + AT_rich Low_complexity Low_complexity 1 34 0 3 1784 3927 92 37 2 chrX 157189794 157190363 -9459933 + L1VL4 LINE L1 371 959 -5343 3 1784 4028 43 8 4 chrX 157190432 157190917 -9459379 - L1Md_F2 LINE L1 -2 6580 6094 3 1784 300 53 0 0 chrX 157190942 157190980 -9459316 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 3 1784 239 178 67 0 chrX 157190989 157191034 -9459262 - ID4_ SINE ID -15 68 21 3 1784 333 141 0 0 chrX 157191034 157191105 -9459191 + (CCA)n Simple_repeat Simple_repeat 1 71 0 3 1784 8420 127 46 18 chrX 157191195 157192561 -9457735 + Lx4B LINE L1 5647 7051 -7 3 1784 502 283 14 14 chrX 157192831 157192978 -9457318 - B1F1 SINE Alu -2 147 1 3 1784 344 255 0 38 chrX 157193027 157193133 -9457163 - RSINE1 SINE B4 -61 104 3 3 1784 848 219 16 5 chrX 157193507 157193691 -9456605 + B3 SINE B2 29 214 -2 3 1784 336 337 65 27 chrX 157193988 157194174 -9456122 + MLT1K LTR MaLR 49 241 -354 3 1784 484 265 100 84 chrX 157194482 157194861 -9455435 - RLTR11A2 LTR ERVK -27 500 116 3 1784 378 61 0 0 chrX 157195094 157195143 -9455153 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1784 432 319 49 42 chrX 157195163 157195307 -9454989 - RSINE1 SINE B4 -18 147 3 3 1784 530 287 0 29 chrX 157195333 157195473 -9454823 - B4A SINE B4 -156 136 1 3 1784 207 0 0 0 chrX 157195958 157195981 -9454315 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 1784 22 35 0 0 chrX 157196072 157196101 -9454195 + AT_rich Low_complexity Low_complexity 1 29 0 3 1784 437 296 68 8 chrX 157197443 157197634 -9452662 + MIR SINE MIR 6 199 -69 3 1784 595 291 19 11 chrX 157197714 157197905 -9452391 - MER20 DNA MER1_type -2 217 30 3 1784 320 274 69 88 chrX 157197903 157198063 -9452233 + MER20 DNA MER1_type 59 215 -4 3 1784 795 45 3 9 chrX 157198182 157198300 -9451996 + B1_Mus2 SINE Alu 19 139 -10 3 1784 1985 167 69 14 chrX 157198484 157198848 -9451448 - ORR1C2 LTR MaLR 0 384 1 3 1784 28 0 0 0 chrX 157198867 157198895 -9451401 + AT_rich Low_complexity Low_complexity 1 28 0 3 1784 595 222 14 27 chrX 157198973 157199120 -9451176 + B1_Mur1 SINE Alu 4 149 0 3 1784 689 162 27 68 chrX 157199122 157199268 -9451028 + B1_Mur1 SINE Alu 1 140 -9 3 1784 513 0 0 0 chrX 157199281 157199338 -9450958 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 1784 443 18 18 0 chrX 157199755 157199811 -9450485 + (TA)n Simple_repeat Simple_repeat 2 58 0 3 1784 258 20 19 75 chrX 157200605 157200658 -9449638 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 3 1784 1077 109 0 0 chrX 157200658 157200805 -9449491 - B1_Mus2 SINE Alu 0 147 1 3 1784 628 105 0 0 chrX 157200813 157200908 -9449388 - B1_Mus2 SINE Alu 0 147 53 3 1784 3368 87 94 12 chrX 157200927 157201022 -9449274 - Lx LINE L1 0 6654 6535 3 1784 195 42 0 0 chrX 157201022 157201046 -9449250 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 3 1784 3368 87 94 12 chrX 157201046 157201463 -9448833 - Lx LINE L1 -120 6534 6102 3 1784 3561 28 0 0 chrX 157201513 157201909 -9448387 - MTA_Mm LTR MaLR 0 396 1 3 1784 734 297 38 5 chrX 157202058 157202268 -9448028 + ID_B1 SINE B4 1 217 -7 3 1784 252 219 31 15 chrX 157203117 157203182 -9447114 - RLTR11A LTR ERVK -27 501 436 3 1784 869 226 36 100 chrX 157203193 157203428 -9446868 + RLTR11A LTR ERVK 240 457 -71 3 1784 315 0 0 0 chrX 157203428 157203463 -9446833 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1784 869 226 36 100 chrX 157203463 157203507 -9446789 + RLTR11A LTR ERVK 458 500 -28 3 1784 23 0 0 0 chrX 157203512 157203535 -9446761 + AT_rich Low_complexity Low_complexity 1 23 0 3 1784 662 14 0 0 chrX 157204041 157204114 -9446182 + tRNA-Val-GTA tRNA tRNA 1 73 -3 3 1784 21 0 0 0 chrX 157204629 157204650 -9445646 + AT_rich Low_complexity Low_complexity 1 21 0 3 1784 379 226 75 0 chrX 157205166 157205273 -9445023 - L1MB2 LINE L1 -57 6126 5995 3 1784 200 326 33 11 chrX 157205424 157205514 -9444782 - MIRb SINE MIR -48 220 129 3 1784 239 319 11 21 chrX 157205575 157205668 -9444628 - L1M5 LINE L1 -347 5777 5686 3 1784 425 275 25 8 chrX 157206529 157206650 -9443646 - MER94 DNA AcHobo -11 123 1 3 1784 346 217 0 0 chrX 157206970 157207039 -9443257 + ID4_ SINE ID 2 70 -13 4 1784 246 290 252 0 chrX 157207086 157207193 -9443103 + B1F SINE Alu 6 139 -10 4 1784 1560 31 0 54 chrX 157207537 157207740 -9442556 - B2_Mm1a SINE B2 -1 192 1 4 1784 440 282 92 0 chrX 157207773 157207904 -9442392 - B1F SINE Alu -2 147 5 4 1784 305 223 0 77 chrX 157207984 157208078 -9442218 - BC1_Mm scRNA scRNA -64 88 4 4 1784 744 246 54 186 chrX 157208184 157208272 -9442024 + B4 SINE B4 1 75 -217 4 1784 207 0 0 0 chrX 157208272 157208295 -9442001 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1784 744 246 54 186 chrX 157208295 157208309 -9441987 + B4 SINE B4 76 79 -213 4 1784 606 204 209 6 chrX 157208309 157208486 -9441810 + B3 SINE B2 4 216 0 4 1784 744 246 54 186 chrX 157208486 157208558 -9441738 + B4 SINE B4 80 156 -136 4 1784 210 143 0 0 chrX 157208558 157208593 -9441703 + (CAGT)n Simple_repeat Simple_repeat 3 37 0 4 1784 744 246 54 186 chrX 157208593 157208750 -9441546 + B4 SINE B4 157 289 -3 4 1784 1450 200 65 9 chrX 157208851 157209189 -9441107 - ORR1D1 LTR MaLR -8 366 10 4 1784 642 255 36 47 chrX 157209871 157210064 -9440232 - B3A SINE B2 -5 193 3 4 1784 765 239 106 60 chrX 157210088 157210390 -9439906 - L1MB8 LINE L1 -27 6151 5836 4 1784 900 241 5 69 chrX 157211761 157211979 -9438317 - ID_B1 SINE B4 -19 205 2 4 1784 543 101 0 0 chrX 157211999 157212078 -9438218 + (GGGA)n Simple_repeat Simple_repeat 4 82 0 4 1784 383 311 91 45 chrX 157212504 157212790 -9437506 - L1M5 LINE L1 -352 5821 5523 4 1784 1397 186 176 3 chrX 157213122 157213441 -9436855 + ORR1D1 LTR MaLR 1 374 0 4 1784 614 283 42 61 chrX 157213495 157213758 -9436538 - MLT1A0 LTR MaLR -76 289 32 4 1784 590 285 0 0 chrX 157213816 157213953 -9436343 + ID_B1 SINE B4 81 217 -7 4 1784 705 302 114 28 chrX 157214649 157214827 -9435469 + B4 SINE B4 16 218 -74 4 1784 202 56 56 0 chrX 157214827 157214863 -9435433 + (TAA)n Simple_repeat Simple_repeat 2 39 0 4 1784 705 302 114 28 chrX 157214863 157214939 -9435357 + B4 SINE B4 219 292 0 4 1784 519 222 0 111 chrX 157214997 157215090 -9435206 + L1_Mur3 LINE L1 5514 5594 -709 4 1784 477 0 0 0 chrX 157215090 157215143 -9435153 + (CAAAA)n Simple_repeat Simple_repeat 4 56 0 4 1784 519 236 1 116 chrX 157215143 157215239 -9435057 + L1_Mur3 LINE L1 5557 5657 -646 4 1784 714 163 0 16 chrX 157215248 157215373 -9434923 + B1_Mur2 SINE Alu 1 123 -26 4 1784 285 293 86 86 chrX 157215601 157215612 -9434684 + B4 SINE B4 79 110 -182 4 1784 604 222 29 7 chrX 157215612 157215748 -9434548 + B1_Mur2 SINE Alu 5 143 -6 4 1784 285 293 86 86 chrX 157215748 157215799 -9434497 + B4 SINE B4 111 276 -16 4 1784 255 125 0 0 chrX 157215954 157215994 -9434302 + (TTTC)n Simple_repeat Simple_repeat 2 41 0 4 1784 1037 62 0 7 chrX 157215994 157216141 -9434155 - B1_Mm SINE Alu 0 147 2 4 1784 810 226 5 59 chrX 157216169 157216371 -9433925 - B3 SINE B2 -1 215 25 4 1784 461 253 23 18 chrX 157216412 157216550 -9433746 - ID_B1 SINE B4 -62 230 91 4 1784 425 211 8 0 chrX 157216606 157216729 -9433567 + GA-rich Low_complexity Low_complexity 3 126 0 4 1784 331 222 41 14 chrX 157216751 157216824 -9433472 + RSINE1 SINE B4 56 130 -35 4 1784 210 157 39 19 chrX 157216872 157216924 -9433372 + A-rich Low_complexity Low_complexity 6 58 0 4 1784 1206 68 0 0 chrX 157216947 157217094 -9433202 + B1_Mus2 SINE Alu 1 147 0 4 1784 215 236 18 0 chrX 157217403 157217458 -9432838 - ID4 SINE ID -10 73 18 4 1784 603 303 24 28 chrX 157217543 157217791 -9432505 - B4A SINE B4 -45 247 1 4 1784 849 158 0 17 chrX 157217922 157218102 -9432194 + GA-rich Low_complexity Low_complexity 3 179 0 4 1784 450 230 370 6 chrX 157218130 157218292 -9432004 + ID_B1 SINE B4 4 224 0 4 1784 570 238 29 50 chrX 157218523 157218684 -9431612 - ID_B1 SINE B4 0 224 72 4 1784 639 206 0 35 chrX 157218841 157218982 -9431314 + ID_B1 SINE B4 86 221 -3 4 1784 813 227 28 38 chrX 157219022 157219233 -9431063 + B4 SINE B4 68 276 -16 4 1784 396 0 0 0 chrX 157219274 157219318 -9430978 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1784 768 235 59 35 chrX 157219336 157219539 -9430757 + ID_B1 SINE B4 2 209 -15 4 1784 243 0 0 0 chrX 157220084 157220111 -9430185 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1784 423 164 276 8 chrX 157220260 157220383 -9429913 - URR1B DNA MER1_type -68 157 2 4 1784 1176 62 0 7 chrX 157221168 157221315 -9428981 + B1_Mm SINE Alu 2 147 0 4 1784 298 282 54 18 chrX 157221847 157221959 -9428337 + ID_B1 SINE B4 102 217 -7 4 1784 523 190 0 0 chrX 157222761 157222840 -9427456 + ID4 SINE ID 3 81 -2 4 1784 223 286 184 0 chrX 157223066 157223164 -9427132 - PB1D10 SINE Alu -1 116 1 4 1784 302 302 159 41 chrX 157223164 157223191 -9427105 - ID_B1 SINE B4 -130 94 51 4 1784 404 256 0 0 chrX 157223191 157223273 -9427023 - ID4 SINE ID 0 83 2 4 1784 302 302 159 41 chrX 157223273 157223314 -9426982 - ID SINE ID -174 50 9 4 1784 525 286 17 104 chrX 157223549 157223779 -9426517 + ID_B1 SINE B4 1 210 -14 4 1784 588 274 44 0 chrX 157223652 157223787 -9426509 + B1_Mur1 SINE Alu 6 146 -3 4 1784 198 0 0 0 chrX 157223790 157223812 -9426484 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 4 1784 542 309 16 48 chrX 157223828 157224015 -9426281 + B4A SINE B4 106 286 -6 4 1784 523 142 31 0 chrX 157224933 157225060 -9425236 + (TCTCTG)n Simple_repeat Simple_repeat 2 132 0 4 1784 673 231 186 11 chrX 157225071 157225259 -9425037 - ID_B1 SINE B4 -2 222 2 4 1784 415 264 52 99 chrX 157225499 157225691 -9424605 + ID_B1 SINE B4 24 199 -25 4 1784 278 288 119 83 chrX 157226661 157226854 -9423442 - MLT1J LTR MaLR -203 309 110 4 1784 430 17 34 0 chrX 157226864 157226923 -9423373 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1784 220 214 0 0 chrX 157227024 157227066 -9423230 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 4 1784 5599 116 80 7 chrX 157227067 157227894 -9422402 - Lx4A LINE L1 -1 7057 6171 4 1784 206 312 114 30 chrX 157228942 157229074 -9421222 - L2b LINE L2 -3 3372 3230 4 1784 472 253 136 26 chrX 157229950 157229993 -9420303 + B3 SINE B2 1 50 -166 4 1784 1467 75 0 31 chrX 157229993 157230185 -9420111 + B2_Mm1t SINE B2 2 187 -6 4 1784 472 253 136 26 chrX 157230185 157230332 -9419964 + B3 SINE B2 51 212 -4 4 1784 350 276 126 0 chrX 157230612 157230699 -9419597 - B1F1 SINE Alu -51 98 1 4 1784 211 387 11 0 chrX 157230699 157230731 -9419565 - B4 SINE B4 -207 85 53 4 1784 870 244 32 23 chrX 157230861 157231079 -9419217 - ID_B1 SINE B4 -4 220 1 4 1784 264 77 0 0 chrX 157231978 157232017 -9418279 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1784 232 276 0 13 chrX 157232024 157232101 -9418195 + MER3 DNA MER1_type 133 208 -1 4 1784 407 282 26 35 chrX 157232237 157232322 -9417974 + RSINE1 SINE B4 12 96 -69 4 1784 468 0 0 0 chrX 157232322 157232374 -9417922 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1784 407 282 26 35 chrX 157232374 157232402 -9417894 + RSINE1 SINE B4 97 124 -41 4 1784 384 22 0 0 chrX 157232763 157232808 -9417488 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 1784 258 105 0 0 chrX 157233169 157233207 -9417089 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 4 1784 599 299 27 91 chrX 157233549 157233629 -9416667 + ID_B1 SINE B4 18 224 0 4 1784 806 206 35 0 chrX 157233629 157233770 -9416526 + B1_Mur1 SINE Alu 4 149 0 4 1784 854 226 76 15 chrX 157233764 157233962 -9416334 + B4A SINE B4 82 291 -1 4 1784 2006 143 121 48 chrX 157233962 157234374 -9415922 + RMER10A LTR ERVL 1 442 0 4 1784 210 98 0 47 chrX 157234388 157234431 -9415865 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 4 1784 796 200 44 0 chrX 157234823 157234958 -9415338 + B1_Mur1 SINE Alu 2 142 -7 4 1784 1206 250 172 33 chrX 157235310 157236156 -9414140 - L1MB8 LINE L1 0 6178 5179 4 1784 584 229 0 17 chrX 157236156 157236276 -9414020 - PB1D9 SINE Alu -1 119 2 4 1784 1199 254 199 21 chrX 157236276 157236736 -9413560 - L1MB8 LINE L1 -968 5178 4654 4 1784 245 338 0 12 chrX 157237103 157237184 -9413112 - ID4_ SINE ID -1 82 3 4 1784 1975 127 40 40 chrX 157237320 157237649 -9412647 + ORR1A4 LTR MaLR 1 329 0 4 1784 666 257 6 50 chrX 157238018 157238178 -9412118 - B3A SINE B2 -45 153 1 4 1784 273 328 24 40 chrX 157238286 157238410 -9411886 - MIR SINE MIR -78 184 63 4 1784 363 216 95 0 chrX 157238564 157238638 -9411658 + ID_B1 SINE B4 81 161 -63 4 1784 269 216 0 0 chrX 157238703 157238754 -9411542 + RSINE1 SINE B4 113 163 -2 4 1784 322 285 72 19 chrX 157239017 157239160 -9411136 + MER58B DNA MER1_type 195 341 0 4 1784 243 0 0 0 chrX 157241215 157241242 -9409054 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 4 1784 698 208 266 0 chrX 157242839 157243012 -9407284 - MER20 DNA MER1_type 0 219 1 4 1784 21 36 0 0 chrX 157244187 157244215 -9406081 + AT_rich Low_complexity Low_complexity 1 28 0 4 1784 280 59 39 0 chrX 157244562 157244613 -9405683 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 4 1784 336 48 0 0 chrX 157244882 157244924 -9405372 + (CAA)n Simple_repeat Simple_repeat 1 42 0 4 1784 367 331 39 58 chrX 157246922 157247011 -9403285 - MLT1J LTR MaLR -261 251 164 4 1784 1424 217 194 0 chrX 157247011 157247325 -9402971 + MTEb LTR MaLR 5 379 0 4 1784 367 331 39 58 chrX 157247325 157247389 -9402907 - MLT1J LTR MaLR -349 163 101 4 1784 242 396 10 50 chrX 157247792 157247893 -9402403 + PB1D10 SINE Alu 1 97 -20 4 1784 465 19 0 0 chrX 157247894 157247948 -9402348 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1784 439 311 25 16 chrX 157248344 157248465 -9401831 - B1F SINE Alu -27 122 1 4 1784 286 372 22 58 chrX 157248793 157248930 -9401366 + B1F SINE Alu 18 149 0 4 1784 189 0 0 0 chrX 157250044 157250065 -9400231 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 4 1784 183 104 41 20 chrX 157250671 157250720 -9399576 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 1784 266 313 156 30 chrX 157251619 157251754 -9398542 + RSINE1 SINE B4 1 152 -13 5 1784 197 349 55 9 chrX 157252155 157252265 -9398031 + MIRc SINE MIR 61 175 -93 5 1784 201 39 0 0 chrX 157253222 157253248 -9397048 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1784 648 276 15 0 chrX 157253371 157253505 -9396791 - B1_Mur3 SINE Alu -9 140 5 5 1784 1024 198 15 44 chrX 157253621 157253827 -9396469 + B3 SINE B2 1 200 -16 5 1784 342 0 0 0 chrX 157255539 157255577 -9394719 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1784 472 185 65 0 chrX 157255621 157255713 -9394583 - Lx4A LINE L1 -133 6925 6828 5 1784 403 169 14 0 chrX 157255709 157255780 -9394516 - Lx4A LINE L1 -159 6899 6828 5 1784 1392 115 9 14 chrX 157255776 157255988 -9394308 - Lx4A LINE L1 -159 6899 6689 5 1784 468 142 149 9 chrX 157255983 157256097 -9394199 + Lx4B LINE L1 6928 7057 -1 5 1784 457 330 6 28 chrX 157256144 157256325 -9393971 + Lx6 LINE L1 7258 7434 -26 5 1784 486 219 55 2 chrX 157256412 157256540 -9393756 + PB1D10 SINE Alu 1 142 -5 5 1784 372 308 72 40 chrX 157256540 157256559 -9393737 + B4 SINE B4 86 237 -55 5 1784 21 36 0 0 chrX 157256992 157257020 -9393276 + AT_rich Low_complexity Low_complexity 1 28 0 5 1784 874 241 14 5 chrX 157257026 157257223 -9393073 - B3 SINE B2 0 198 4 5 1784 285 274 0 0 chrX 157257274 157257336 -9392960 + ID4 SINE ID 3 64 -19 5 1784 215 284 60 0 chrX 157257372 157257439 -9392857 + AluG_3 SINE Alu 148 218 -93 5 1784 429 229 57 89 chrX 157257480 157257516 -9392780 + B4A SINE B4 63 100 -192 5 1784 198 0 0 0 chrX 157257516 157257538 -9392758 + (TGG)n Simple_repeat Simple_repeat 2 23 0 5 1784 429 229 57 89 chrX 157257538 157257659 -9392637 + B4A SINE B4 101 215 -77 5 1784 1029 45 0 8 chrX 157257539 157257660 -9392636 + B1_Mus1 SINE Alu 17 137 -11 5 1784 642 47 0 0 chrX 157257660 157257746 -9392550 + (CCAA)n Simple_repeat Simple_repeat 2 87 0 5 1784 1029 45 0 8 chrX 157257746 157257757 -9392539 + B1_Mus1 SINE Alu 138 148 0 5 1784 1212 52 0 0 chrX 157258776 157258912 -9391384 + B1_Mus1 SINE Alu 1 136 -12 5 1784 234 300 23 23 chrX 157258927 157259060 -9391236 + GA-rich Low_complexity Low_complexity 2 134 0 5 1784 233 316 170 7 chrX 157260168 157260321 -9389975 - Tigger15a DNA TcMar -521 194 17 5 1784 481 294 0 0 chrX 157260949 157261051 -9389245 - PB1D10 SINE Alu -10 107 6 5 1784 242 287 21 110 chrX 157261391 157261536 -9388760 - MIR SINE MIR -1 261 130 5 1784 207 356 62 8 chrX 157261554 157261684 -9388612 + MIRb SINE MIR 118 254 -14 5 1784 426 269 25 36 chrX 157262721 157262849 -9387447 + B1F SINE Alu 24 210 -101 5 1784 415 233 34 49 chrX 157262929 157263137 -9387159 - Lx9 LINE L1 -1398 6246 5930 5 1784 4694 174 105 16 chrX 157263122 157263242 -9387054 + Lx9 LINE L1 6563 6684 -960 5 1784 2060 163 44 14 chrX 157263242 157263609 -9386687 + ORR1C1 LTR MaLR 1 378 0 5 1784 4694 174 105 16 chrX 157263609 157264481 -9385815 + Lx9 LINE L1 6685 7643 -1 5 1784 209 57 29 0 chrX 157264485 157264520 -9385776 + (CAA)n Simple_repeat Simple_repeat 2 37 0 5 1784 398 287 11 5 chrX 157264903 157265015 -9385281 + B1F2 SINE Alu 3 112 -5 5 1784 656 130 230 40 chrX 157265153 157265282 -9385014 + B2_Mm2 SINE B2 2 161 -34 5 1784 615 81 0 0 chrX 157265282 157265368 -9384928 + (TA)n Simple_repeat Simple_repeat 2 87 0 5 1784 656 130 230 40 chrX 157265368 157265390 -9384906 + B2_Mm2 SINE B2 162 182 -13 5 1784 304 273 0 15 chrX 157265978 157266045 -9384251 - ID4_ SINE ID -17 66 1 5 1784 192 295 135 30 chrX 157266424 157266557 -9383739 + L2a LINE L2 3215 3361 -65 5 1784 613 274 7 7 chrX 157266659 157266806 -9383490 + B1_Mur1 SINE Alu 1 147 -2 5 1784 441 206 0 0 chrX 157266807 157266909 -9383387 + (TA)n Simple_repeat Simple_repeat 1 102 0 5 1784 430 360 14 41 chrX 157266916 157267061 -9383235 + RSINE1 SINE B4 14 154 -11 5 1784 192 320 49 37 chrX 157269527 157269608 -9380688 + MIR SINE MIR 41 122 -140 5 1784 332 275 2 19 chrX 157270357 157270465 -9379831 + B4 SINE B4 14 119 -46 5 1784 234 81 0 0 chrX 157270504 157270541 -9379755 + (CATA)n Simple_repeat Simple_repeat 1 37 0 5 1784 663 304 82 0 chrX 157270558 157270716 -9379580 + B3A SINE B2 1 171 -27 5 1784 2499 187 77 0 chrX 157270869 157271350 -9378946 + Lx2A1 LINE L1 6487 7004 -4 5 1784 566 168 59 101 chrX 157271517 157271636 -9378660 - PB1D9 SINE Alu -6 114 1 5 1784 580 265 210 7 chrX 157272856 157273088 -9377208 + Lx8 LINE L1 6934 7212 -261 5 1784 555 16 0 0 chrX 157273088 157273152 -9377144 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 1784 580 265 210 7 chrX 157273152 157273200 -9377096 + Lx8 LINE L1 7213 7270 -203 5 1784 432 0 0 0 chrX 157273360 157273408 -9376888 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 1784 243 303 32 32 chrX 157275699 157275825 -9374471 + RMER12 LTR ERVK 720 845 -477 5 1784 501 248 62 0 chrX 157276080 157276193 -9374103 - ID_B1 SINE B4 -4 220 101 5 1784 277 331 104 15 chrX 157276193 157276210 -9374086 - B1_Mus1 SINE Alu -1 142 1 5 1784 229 241 50 139 chrX 157276295 157276396 -9373900 + B1F1 SINE Alu 1 92 -57 5 1784 264 185 0 0 chrX 157277484 157277538 -9372758 + GA-rich Low_complexity Low_complexity 1 54 0 5 1784 3255 189 91 18 chrX 157278499 157279181 -9371115 + Lx5 LINE L1 5995 6726 -324 5 1784 729 102 0 0 chrX 157279183 157279281 -9371015 + RLTR13D2 LTR ERVK 1 98 -1016 5 1784 3551 103 17 24 chrX 157279272 157279810 -9370486 + RLTR13D2 LTR ERVK 490 1023 0 5 1784 1389 222 68 16 chrX 157279810 157280117 -9370179 + Lx5 LINE L1 6723 7045 -5 5 1784 432 0 0 0 chrX 157280773 157280821 -9369475 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 5 1784 312 377 38 6 chrX 157280939 157281099 -9369197 - L1M5 LINE L1 -522 5602 5438 5 1784 278 106 0 21 chrX 157281102 157281150 -9369146 + (TATG)n Simple_repeat Simple_repeat 4 50 0 5 1784 786 226 13 0 chrX 157281159 157281314 -9368982 - B3A SINE B2 -41 157 1 5 1784 222 91 0 0 chrX 157282531 157282564 -9367732 + (TA)n Simple_repeat Simple_repeat 1 33 0 5 1784 250 343 41 20 chrX 157282640 157282786 -9367510 + L1ME3A LINE L1 5991 6139 -34 5 1784 1021 193 42 5 chrX 157282794 157282987 -9367309 - B3 SINE B2 -15 201 2 5 1784 909 42 0 0 chrX 157283031 157283149 -9367147 + B1_Mm SINE Alu 30 147 0 5 1784 202 242 16 0 chrX 157283319 157283381 -9366915 + T-rich Low_complexity Low_complexity 1 63 0 5 1784 382 343 37 0 chrX 157283955 157284063 -9366233 - PB1D7 SINE Alu -7 113 2 5 1784 860 210 111 0 chrX 157284088 157284269 -9366027 + B3 SINE B2 1 201 -15 5 1784 363 286 65 72 chrX 157286068 157286238 -9364058 - MIRb SINE MIR -82 186 19 5 27 1197 199 22 5 chrX 157286381 157286603 -9363693 + URR1A DNA MER1_type 1 226 0 5 1785 1658 219 77 33 chrX 157286692 157287045 -9363251 + Lx9 LINE L1 7132 7484 -160 5 1785 863 102 86 0 chrX 157287045 157287173 -9363123 + B1_Mus1 SINE Alu 3 141 -7 5 1785 1658 219 77 33 chrX 157287173 157287310 -9362986 + Lx9 LINE L1 7485 7644 0 5 1785 1102 96 7 0 chrX 157287334 157287480 -9362816 + B1_Mus1 SINE Alu 1 147 -1 5 1785 248 111 19 0 chrX 157287484 157287538 -9362758 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 5 1785 255 61 0 0 chrX 157287529 157287562 -9362734 + (GA)n Simple_repeat Simple_repeat 2 34 0 5 1785 750 269 16 11 chrX 157287594 157287881 -9362415 + L1MA4 LINE L1 5642 5932 -368 5 1785 273 29 0 0 chrX 157288000 157288034 -9362262 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1785 360 0 0 0 chrX 157288034 157288073 -9362223 + (GA)n Simple_repeat Simple_repeat 1 40 0 5 1785 211 123 45 15 chrX 157288697 157288763 -9361533 + T-rich Low_complexity Low_complexity 1 68 0 5 1785 477 306 116 42 chrX 157289049 157289308 -9360988 + Lx8 LINE L1 7196 7473 0 5 1785 821 144 19 64 chrX 157291707 157291863 -9358433 + B1_Mur2 SINE Alu 1 149 0 5 1785 1160 264 14 7 chrX 157292102 157292384 -9357912 + B4A SINE B4 1 284 -8 5 1785 231 36 0 0 chrX 157292396 157292424 -9357872 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1785 1185 68 0 0 chrX 157293323 157293470 -9356826 + B1_Mus1 SINE Alu 2 148 0 5 1785 729 294 5 34 chrX 157293690 157293894 -9356402 + B4 SINE B4 1 198 -94 5 1785 773 203 14 20 chrX 157295562 157295708 -9354588 - B3A SINE B2 -53 145 1 5 1785 867 269 24 5 chrX 157295741 157295954 -9354342 + ID_B1 SINE B4 5 221 -3 5 1785 26 0 0 0 chrX 157297215 157297241 -9353055 + AT_rich Low_complexity Low_complexity 1 26 0 5 1785 404 274 20 0 chrX 157297470 157297572 -9352724 - ID_B1 SINE B4 -6 218 115 5 1785 241 246 70 0 chrX 157297706 157297763 -9352533 - ID4_ SINE ID -18 65 5 5 1785 279 79 0 0 chrX 157298080 157298118 -9352178 + (TAA)n Simple_repeat Simple_repeat 3 40 0 5 1785 254 291 0 0 chrX 157299220 157299275 -9351021 + G-rich Low_complexity Low_complexity 2 56 0 5 1785 210 219 0 0 chrX 157299336 157299377 -9350919 + B3A SINE B2 2 42 -156 5 1785 261 0 0 0 chrX 157299492 157299521 -9350775 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1785 880 161 86 0 chrX 157299726 157299900 -9350396 + B2_Mm2 SINE B2 1 189 -6 5 1785 420 313 87 18 chrX 157300123 157300341 -9349955 + Charlie1a DNA MER1_type 104 336 -1119 5 1785 1190 231 17 104 chrX 157300341 157300756 -9349540 + MTE2a LTR MaLR 1 379 0 5 1785 222 91 0 0 chrX 157300758 157300791 -9349505 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 1785 265 156 0 22 chrX 157301000 157301046 -9349250 - ID4_ SINE ID -38 45 1 5 1785 556 302 122 36 chrX 157301141 157301584 -9348712 + Tigger13a DNA MER2_type 246 726 -45 5 1785 376 319 93 6 chrX 157301679 157301840 -9348456 + MLT1J LTR MaLR 2 176 -336 6 1785 230 287 53 11 chrX 157301871 157301966 -9348330 + MLT1J LTR MaLR 376 474 -38 6 1785 952 178 20 10 chrX 157302538 157302737 -9347559 + Lx7 LINE L1 7240 7440 -256 6 1785 478 258 30 8 chrX 157302788 157302921 -9347375 + Lx7 LINE L1 7560 7695 -1 6 1785 375 201 52 48 chrX 157304160 157304266 -9346030 + PB1D10 SINE Alu 13 127 0 6 1785 545 247 226 4 chrX 157304952 157305203 -9345093 + MER46C DNA MER2_type 21 326 -12 6 1785 243 0 0 0 chrX 157306094 157306121 -9344175 + (GA)n Simple_repeat Simple_repeat 1 27 0 6 1785 216 250 36 0 chrX 157307208 157307264 -9343032 - B4 SINE B4 -232 60 3 6 1785 352 294 128 0 chrX 157307436 157307545 -9342751 + PB1 SINE Alu 1 123 -4 6 1785 441 0 0 0 chrX 157307545 157307594 -9342702 + (TAAAA)n Simple_repeat Simple_repeat 2 50 0 6 1785 265 293 13 0 chrX 157307598 157307673 -9342623 + ID2 SINE ID 2 77 -6 6 1785 584 275 22 7 chrX 157308576 157308715 -9341581 + B1F SINE Alu 1 141 -8 6 1785 618 83 0 0 chrX 157308731 157308815 -9341481 + B2_Mm2 SINE B2 4 87 -108 6 1785 302 283 0 71 chrX 157308815 157308830 -9341466 + RSINE1 SINE B4 5 96 -69 6 1785 247 206 0 40 chrX 157308833 157308909 -9341387 + GA-rich Low_complexity Low_complexity 1 73 0 6 1785 265 189 0 19 chrX 157308945 157308999 -9341297 + PB1D10 SINE Alu 65 117 0 6 1785 640 248 25 6 chrX 157310344 157310506 -9339790 + RSINE1 SINE B4 1 165 0 6 1785 2681 84 94 0 chrX 157310550 157310944 -9339352 + Lx LINE L1 6224 6654 0 6 1785 391 207 320 0 chrX 157311578 157311732 -9338564 + B3 SINE B2 6 208 -8 6 1785 54 94 0 0 chrX 157312076 157312235 -9338061 + AT_rich Low_complexity Low_complexity 1 159 0 6 1785 1123 78 0 0 chrX 157312634 157312776 -9337520 - B1_Mus2 SINE Alu -5 142 1 6 1785 213 250 70 18 chrX 157312944 157313001 -9337295 + B1F SINE Alu 85 144 -5 6 1785 226 200 22 0 chrX 157314873 157314918 -9335378 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 1785 336 337 0 0 chrX 157315281 157315364 -9334932 - RSINE1 SINE B4 -4 161 79 6 1785 381 176 0 0 chrX 157315409 157315483 -9334813 + GA-rich Low_complexity Low_complexity 4 77 0 6 1785 1206 204 21 17 chrX 157315705 157315940 -9334356 + B4 SINE B4 4 239 -53 6 1785 472 195 13 0 chrX 157315944 157316093 -9334203 + CT-rich Low_complexity Low_complexity 2 152 0 6 1785 252 0 0 0 chrX 157316093 157316121 -9334175 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 1785 22 0 0 0 chrX 157316309 157316331 -9333965 + AT_rich Low_complexity Low_complexity 1 22 0 6 1785 296 304 44 9 chrX 157318078 157318191 -9332105 + PB1D10 SINE Alu 1 117 0 6 1785 263 308 37 49 chrX 157318734 157318762 -9331534 - PB1D10 SINE Alu -1 116 36 6 1785 288 259 0 0 chrX 157318762 157318816 -9331480 - ID_B1 SINE B4 -54 170 117 6 1785 243 383 28 0 chrX 157318874 157318981 -9331315 - MIRb SINE MIR -34 234 125 6 1785 420 55 0 0 chrX 157319274 157319329 -9330967 + (TG)n Simple_repeat Simple_repeat 1 55 0 6 1785 1150 55 0 7 chrX 157319417 157319564 -9330732 - B1_Mus2 SINE Alu 0 147 2 6 1785 23 33 0 0 chrX 157319659 157319689 -9330607 + AT_rich Low_complexity Low_complexity 1 30 0 6 1785 600 256 52 95 chrX 157320527 157320738 -9329558 + B3 SINE B2 1 202 -14 6 1785 216 0 0 0 chrX 157321147 157321171 -9329125 + (CTTTG)n Simple_repeat Simple_repeat 1 24 0 6 1785 532 304 7 28 chrX 157321180 157321322 -9328974 - ID_B1 SINE B4 -16 208 70 6 1785 844 257 48 0 chrX 157321459 157321646 -9328650 - B3 SINE B2 -19 197 2 6 1785 874 297 4 72 chrX 157321646 157321885 -9328411 - B4A SINE B4 -70 222 1 6 1785 420 247 0 0 chrX 157321906 157321983 -9328313 - ID SINE ID -145 79 3 6 1785 228 359 0 0 chrX 157323070 157323134 -9327162 - ID2 SINE ID 0 83 20 6 1785 604 120 11 11 chrX 157323176 157323269 -9327027 + B2_Mm2 SINE B2 1 93 -102 6 1785 1866 158 87 48 chrX 157323286 157323665 -9326631 + MTB_Mm LTR MaLR 1 394 0 6 1785 5921 164 81 25 chrX 157323665 157324701 -9325595 + MTB_Mm-int LTR MaLR 1 1075 -183 6 1785 6102 166 66 10 chrX 157324701 157325075 -9325221 + Lx5 LINE L1 5813 6233 -817 6 1785 339 25 0 0 chrX 157325075 157325115 -9325181 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1785 6102 166 66 10 chrX 157325115 157325902 -9324394 + Lx5 LINE L1 6234 7038 -12 6 1785 5921 164 81 25 chrX 157325902 157326056 -9324240 + MTB_Mm-int LTR MaLR 1076 1257 -1 6 1785 2017 124 168 31 chrX 157326056 157326414 -9323882 + MTB_Mm LTR MaLR 1 407 0 6 1785 246 128 0 0 chrX 157326427 157326466 -9323830 + (A)n Simple_repeat Simple_repeat 1 39 0 6 1785 368 291 33 41 chrX 157326827 157326949 -9323347 + RSINE1 SINE B4 3 123 -42 6 1785 459 113 0 0 chrX 157326951 157327022 -9323274 + (CA)n Simple_repeat Simple_repeat 1 71 0 6 1785 1198 68 0 0 chrX 157327039 157327187 -9323109 - B1_Mus1 SINE Alu 0 148 1 6 1785 647 203 0 68 chrX 157327194 157327342 -9322954 - B1_Mur2 SINE Alu -7 142 5 6 1785 1935 72 0 70 chrX 157327344 157327607 -9322689 + Lx3_Mus LINE L1 6707 6965 -44 6 1785 3677 69 2 10 chrX 157327607 157328091 -9322205 + L1_Mus2 LINE L1 6086 6565 -1 6 1785 1935 72 0 70 chrX 157328091 157328132 -9322164 + Lx3_Mus LINE L1 6966 6989 -20 6 1785 234 0 0 0 chrX 157328132 157328158 -9322138 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 6 1785 229 330 34 11 chrX 157328366 157328455 -9321841 + LTR85c LTR Gypsy? 712 802 -21 6 1785 254 314 0 0 chrX 157328714 157328784 -9321512 - ID4 SINE ID -12 71 2 6 1785 275 221 108 34 chrX 157329135 157329231 -9321065 + FLAM_A SINE Alu 1 111 -6 6 1785 598 300 145 13 chrX 157329375 157329679 -9320617 + Tigger8 DNA MER2_type 124 467 -199 6 1785 226 296 96 24 chrX 157329879 157329962 -9320334 - LTR81C LTR ERV1? -198 1152 1064 6 1785 250 357 109 52 chrX 157330535 157330745 -9319551 - LTR81C LTR ERV1? -929 224 3 6 1785 314 256 252 32 chrX 157330841 157331015 -9319281 + B3A SINE B2 1 216 0 6 1785 1044 299 106 82 chrX 157331547 157332196 -9318100 + Lx8 LINE L1 6712 7376 -97 6 1785 578 181 98 131 chrX 157332242 157332395 -9317901 + B3 SINE B2 63 210 -6 6 1785 1665 248 65 70 chrX 157332865 157333031 -9317265 + L1MA6 LINE L1 5268 5427 -873 6 1785 1077 203 25 5 chrX 157333031 157333234 -9317062 + B3 SINE B2 1 207 -9 6 1785 1665 248 65 70 chrX 157333234 157333756 -9316540 + L1MA6 LINE L1 5428 5953 -347 6 1785 239 313 145 17 chrX 157333921 157334038 -9316258 - L2c LINE L2 0 3387 3256 6 1785 225 260 0 74 chrX 157334047 157334101 -9316195 + ZP3AR Satellite Satellite 44 93 -119 6 1785 303 299 0 49 chrX 157334494 157334506 -9315790 - PB1D7 SINE Alu -2 118 108 6 1785 333 0 0 0 chrX 157334506 157334543 -9315753 + (TTTTG)n Simple_repeat Simple_repeat 1 37 0 6 1785 303 299 0 49 chrX 157334543 157334653 -9315643 - PB1D7 SINE Alu -13 107 2 6 1785 1270 76 0 6 chrX 157334755 157334926 -9315370 + B2_Mm2 SINE B2 1 170 -25 6 1785 234 0 0 0 chrX 157334927 157334953 -9315343 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 6 1785 371 322 28 39 chrX 157336159 157336337 -9313959 + MIR SINE MIR 16 191 -71 6 1785 1258 210 194 59 chrX 157337013 157337519 -9312777 + RMER4B LTR ERVK 1 574 -11 6 1785 777 22 0 0 chrX 157337803 157337894 -9312402 + (GA)n Simple_repeat Simple_repeat 2 92 0 6 1785 346 255 18 18 chrX 157338028 157338154 -9312142 + L1MD2 LINE L1 5879 6005 -237 6 1785 355 250 135 0 chrX 157338179 157338283 -9312013 + L1MD2 LINE L1 6064 6181 -178 6 1785 482 254 115 0 chrX 157338283 157338405 -9311891 + ID_B1 SINE B4 86 221 -3 6 1785 247 0 25 50 chrX 157338409 157338449 -9311847 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 6 1785 654 244 126 55 chrX 157338457 157338639 -9311657 + ID_B1 SINE B4 4 198 -26 6 1785 2687 113 5 8 chrX 157338670 157339071 -9311225 + Lx4A LINE L1 6654 7053 -5 6 1785 216 0 0 0 chrX 157339071 157339095 -9311201 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 6 1785 585 261 0 90 chrX 157339147 157339303 -9310993 + B1_Mur1 SINE Alu 2 143 -6 6 1785 374 250 79 24 chrX 157339389 157339516 -9310780 + MER119 DNA MER1_type 226 359 -224 6 1785 361 296 36 96 chrX 157339539 157339759 -9310537 + LTR81C LTR ERV1? 912 1118 -35 6 1785 266 324 31 0 chrX 157342282 157342405 -9307891 - L2a LINE L2 -4 3422 3240 6 1785 489 260 55 8 chrX 157342425 157342553 -9307743 + B1F1 SINE Alu 10 143 -6 6 1785 396 0 0 0 chrX 157342669 157342713 -9307583 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1785 369 301 80 75 chrX 157344652 157344853 -9305443 + L1MCa LINE L1 1 202 -6306 6 1785 232 190 102 17 chrX 157344978 157345037 -9305259 + L1MCa LINE L1 403 466 -6042 6 1785 539 157 133 8 chrX 157345062 157345190 -9305106 + B1_Mus2 SINE Alu 2 145 -2 6 1785 382 286 19 9 chrX 157345265 157345371 -9304925 - PB1D10 SINE Alu -8 109 3 6 1785 227 313 89 82 chrX 157345455 157345735 -9304561 + L1MCa LINE L1 502 790 -5255 6 1785 803 140 262 27 chrX 157345735 157345918 -9304378 + URR1A DNA MER1_type 1 226 0 6 1785 227 313 89 82 chrX 157345918 157345961 -9304335 + L1MCa LINE L1 791 835 -5210 6 1785 260 348 25 37 chrX 157345961 157346122 -9304174 + RSINE1 SINE B4 4 162 -3 6 1785 266 309 63 36 chrX 157346122 157346357 -9303939 + L1MCa LINE L1 836 1151 -5600 6 1785 244 354 25 0 chrX 157346357 157346371 -9303925 + B4A SINE B4 71 86 -206 6 1785 401 278 17 9 chrX 157346371 157346487 -9303809 + PB1D10 SINE Alu 1 117 0 6 1785 450 196 19 56 chrX 157346515 157346623 -9303673 + PB1D9 SINE Alu 17 120 0 6 1785 450 196 19 56 chrX 157346810 157346918 -9303378 - PB1D9 SINE Alu 0 120 17 6 1785 1059 266 97 43 chrX 157347004 157347510 -9302786 + L1MB4 LINE L1 5588 6120 -60 6 1785 278 224 0 0 chrX 157347547 157347623 -9302673 + L1MB5 LINE L1 4327 4402 -1738 6 1785 825 327 29 13 chrX 157347650 157348028 -9302268 + L1MB5 LINE L1 4569 4952 -1194 6 1785 676 261 0 7 chrX 157348034 157348177 -9302119 + ID_B1 SINE B4 78 219 -5 6 1785 899 188 0 0 chrX 157348403 157348552 -9301744 + B1_Mur3 SINE Alu 1 149 0 6 1785 198 0 0 0 chrX 157348652 157348674 -9301622 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 1785 802 254 19 25 chrX 157348705 157348919 -9301377 + B3 SINE B2 1 194 -1 6 1785 605 250 161 26 chrX 157348920 157349296 -9301000 + L1MB5 LINE L1 4953 5372 -774 6 1785 2591 224 45 145 chrX 157349300 157350316 -9299980 + RMER17B LTR ERVK 1 915 -43 6 1785 645 306 81 39 chrX 157350335 157350593 -9299703 + B4A SINE B4 4 272 -20 7 1785 240 279 0 29 chrX 157350600 157350670 -9299626 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 7 1785 1459 225 202 84 chrX 157350698 157351296 -9299000 + L1MB5 LINE L1 5353 6024 -150 6 1785 2958 23 12 0 chrX 157351296 157351638 -9298658 + ORR1A0 LTR MaLR 1 346 0 7 1785 1459 225 202 84 chrX 157351638 157351767 -9298529 + L1MB5 LINE L1 6025 6166 -8 6 1785 520 285 62 12 chrX 157352392 157352552 -9297744 - MER58B DNA MER1_type -1 340 173 7 1785 570 285 14 27 chrX 157353180 157353328 -9296968 + RSINE1 SINE B4 12 157 -8 7 1785 766 142 14 63 chrX 157353782 157353925 -9296371 - B1_Mur4 SINE Alu -14 136 1 7 1785 339 269 111 0 chrX 157354222 157354330 -9295966 + PB1D9 SINE Alu 1 120 0 7 1785 195 162 0 0 chrX 157354350 157354387 -9295909 + GA-rich Low_complexity Low_complexity 4 40 0 7 1785 447 270 10 27 chrX 157354699 157354820 -9295476 + B1F SINE Alu 5 113 -7 7 1785 874 140 7 0 chrX 157355371 157355514 -9294782 + B1_Mur3 SINE Alu 1 144 -5 7 1785 204 40 0 0 chrX 157355514 157355539 -9294757 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 7 1785 559 307 8 0 chrX 157355737 157355864 -9294432 + B1F SINE Alu 2 129 -20 7 1785 626 164 8 0 chrX 157355871 157355993 -9294303 + GA-rich Low_complexity Low_complexity 2 124 0 7 1785 517 228 83 38 chrX 157356050 157356182 -9294114 + B1F SINE Alu 1 138 -11 7 1785 2191 122 32 3 chrX 157356182 157356528 -9293768 - ORR1B2 LTR MaLR -11 356 1 7 1785 1701 157 67 6 chrX 157356659 157356998 -9293298 - MTC LTR MaLR -5 374 1 7 1785 981 90 176 38 chrX 157357622 157357809 -9292487 + L1_Mus1 LINE L1 6368 6582 0 7 1785 446 248 48 0 chrX 157358030 157358135 -9292161 + RSINE1 SINE B4 50 159 -6 7 1785 667 135 0 26 chrX 157358188 157358302 -9291994 + Lx9 LINE L1 7366 7476 -168 7 1785 423 98 0 0 chrX 157358304 157358365 -9291931 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1785 447 144 86 9 chrX 157358366 157358471 -9291825 + Lx9 LINE L1 7523 7635 -9 7 1785 1833 128 63 20 chrX 157358491 157358793 -9291503 - Lx4A LINE L1 0 7058 6744 7 1785 1531 147 178 0 chrX 157358793 157359086 -9291210 + L1_Mur2 LINE L1 49 393 -6319 7 1785 32 57 0 0 chrX 157359249 157359302 -9290994 + AT_rich Low_complexity Low_complexity 1 53 0 7 1785 794 233 12 19 chrX 157359802 157359964 -9290332 - ID_B1 SINE B4 -58 166 6 7 1785 575 268 39 8 chrX 157360269 157360397 -9289899 + ID_B1 SINE B4 84 215 -9 7 1785 1239 20 16 33 chrX 157360510 157360818 -9289478 + (TG)n Simple_repeat Simple_repeat 1 302 0 7 1785 752 232 27 54 chrX 157360891 157361114 -9289182 + ID_B1 SINE B4 2 218 -6 7 1785 481 275 36 7 chrX 157362698 157362837 -9287459 + B1F1 SINE Alu 1 143 -6 7 1785 220 271 14 28 chrX 157363022 157363094 -9287202 + ID4_ SINE ID 1 71 -12 7 1785 768 108 0 0 chrX 157363094 157363233 -9287063 + (TC)n Simple_repeat Simple_repeat 1 139 0 7 1785 441 0 0 0 chrX 157363233 157363281 -9287015 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 1785 1326 74 45 0 chrX 157363327 157363503 -9286793 + B2_Mm2 SINE B2 4 187 -8 7 1785 1508 35 56 65 chrX 157364383 157364599 -9285697 - L1Md_F3 LINE L1 -14 6570 6357 7 1785 2071 28 8 0 chrX 157364599 157364854 -9285442 + L1_Mm LINE L1 5022 5278 -605 7 1785 21 0 0 0 chrX 157364869 157364890 -9285406 + AT_rich Low_complexity Low_complexity 1 21 0 7 1785 948 118 0 0 chrX 157364897 157365032 -9285264 + B1_Mur3 SINE Alu 9 143 -6 7 1785 449 288 34 7 chrX 157365071 157365218 -9285078 - RSINE1 SINE B4 -13 152 2 7 1785 815 179 15 0 chrX 157366022 157366156 -9284140 + B1_Mur3 SINE Alu 8 143 -6 7 1785 275 236 76 114 chrX 157366902 157367007 -9283289 - PB1D9 SINE Alu -17 103 3 7 1785 912 240 72 9 chrX 157367071 157367294 -9283002 - Lx8 LINE L1 -98 7375 7139 7 1785 1313 300 164 6 chrX 157367354 157368061 -9282235 + L1MC4 LINE L1 6673 7491 -551 7 1785 225 345 191 0 chrX 157368065 157368149 -9282147 + ID_B1 SINE B4 87 186 -38 7 1785 406 236 91 0 chrX 157368541 157368651 -9281645 + PB1D9 SINE Alu 1 120 0 7 1785 623 260 46 7 chrX 157368680 157368831 -9281465 + B3A SINE B2 16 172 -26 7 1785 237 332 139 45 chrX 157369090 157369292 -9281004 + L2 LINE L2 2813 3033 -386 7 1785 1000 124 194 0 chrX 157369319 157369505 -9280791 - URR1B DNA MER1_type -1 224 3 7 1785 523 155 0 58 chrX 157369557 157369660 -9280636 - PB1D7 SINE Alu -2 118 22 7 1785 319 274 160 17 chrX 157369563 157369682 -9280614 - B4A SINE B4 -72 220 85 7 1785 355 371 94 71 chrX 157370464 157371200 -9279096 + L1MEg LINE L1 159 911 -5331 7 1785 356 267 182 50 chrX 157371377 157371657 -9278639 + L1MEg LINE L1 2689 3005 -3141 7 1785 539 286 7 63 chrX 157371661 157371803 -9278493 + RSINE1 SINE B4 2 135 -30 7 1785 379 207 62 57 chrX 157372099 157372223 -9278073 + PB1D7 SINE Alu 1 120 0 7 1785 431 242 72 43 chrX 157372243 157372381 -9277915 + MLT1E3 LTR MaLR 481 622 -2 7 1785 347 301 168 15 chrX 157372465 157372661 -9277635 + L1ME3B LINE L1 6009 6234 -6 7 1785 1284 93 0 0 chrX 157373060 157373286 -9277010 + (GAAA)n Simple_repeat Simple_repeat 1 226 0 7 1785 221 77 0 49 chrX 157373899 157373940 -9276356 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 7 1785 546 266 24 8 chrX 157373940 157374065 -9276231 - RSINE1 SINE B4 -36 129 3 7 1785 306 0 0 0 chrX 157375339 157375373 -9274923 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1785 335 240 153 20 chrX 157375374 157375472 -9274824 - RSINE1 SINE B4 -40 125 15 7 1785 524 154 0 28 chrX 157375778 157375885 -9274411 - Lx9 LINE L1 -21 7623 7520 7 1785 225 83 0 0 chrX 157375885 157375921 -9274375 + (TC)n Simple_repeat Simple_repeat 2 37 0 7 1785 330 26 0 0 chrX 157375921 157375960 -9274336 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 1785 251 53 53 0 chrX 157376006 157376044 -9274252 - Lx9 LINE L1 -193 7451 7412 7 1785 486 95 27 0 chrX 157376150 157376224 -9274072 - Lx9 LINE L1 -193 7451 7376 7 1785 442 343 90 7 chrX 157376233 157376377 -9273919 + RSINE1 SINE B4 2 157 -8 7 1785 2513 138 12 15 chrX 157376429 157376841 -9273455 + Lx4B LINE L1 6646 7056 -2 7 1785 336 244 201 62 chrX 157376888 157377032 -9273264 + RSINE1 SINE B4 2 165 0 7 1785 302 289 113 7 chrX 157377048 157377198 -9273098 + L1MC LINE L1 5399 5564 -2318 7 1785 254 221 88 0 chrX 157377313 157377381 -9272915 + ID4 SINE ID 1 74 -9 7 1785 572 313 0 18 chrX 157377561 157377727 -9272569 + RSINE1 SINE B4 3 165 0 7 1785 596 233 109 12 chrX 157377890 157378055 -9272241 + B3A SINE B2 2 182 -16 7 1785 28 0 0 0 chrX 157378776 157378804 -9271492 + AT_rich Low_complexity Low_complexity 1 28 0 7 1785 354 209 120 92 chrX 157379247 157379389 -9270907 - MER21B LTR ERV1 -189 674 529 7 1785 789 199 50 33 chrX 157379614 157379796 -9270500 + B3 SINE B2 25 209 -7 7 1785 368 181 95 27 chrX 157379893 157379967 -9270329 + B4 SINE B4 186 264 -28 7 1785 243 0 0 0 chrX 157379967 157379994 -9270302 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1785 538 172 16 30 chrX 157380021 157380142 -9270154 - B3 SINE B2 -73 122 1 7 1785 22 0 0 0 chrX 157380512 157380534 -9269762 + AT_rich Low_complexity Low_complexity 1 22 0 7 1785 234 370 20 10 chrX 157380565 157380666 -9269630 - MIRb SINE MIR -103 165 64 7 1785 968 110 7 0 chrX 157381216 157381352 -9268944 + B1_Mur3 SINE Alu 1 137 -12 7 1785 515 282 6 77 chrX 157382119 157382288 -9268008 + RSINE1 SINE B4 9 165 0 7 1785 422 235 117 7 chrX 157382646 157382800 -9267496 + L1M4b LINE L1 1665 1835 -5499 7 1785 367 225 16 16 chrX 157382806 157382912 -9267384 + MLT2B4 LTR ERVL 6 111 -286 7 1785 645 236 76 0 chrX 157382923 157383080 -9267216 + ORR1C2 LTR MaLR 216 384 0 7 1785 305 297 136 6 chrX 157383080 157383256 -9267040 + L1M4b LINE L1 1989 2187 -5147 7 1785 360 317 32 40 chrX 157383257 157383382 -9266914 + B1F1 SINE Alu 6 129 -20 7 1785 180 0 0 0 chrX 157383456 157383476 -9266820 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 7 1785 310 319 70 7 chrX 157383492 157383634 -9266662 + L1M4b LINE L1 2312 2462 -4872 7 1785 257 180 0 0 chrX 157383653 157383703 -9266593 + L1M4b LINE L1 2691 2740 -4594 7 1785 412 264 8 97 chrX 157383817 157383891 -9266405 - B4 SINE B4 0 292 227 7 1785 612 284 14 0 chrX 157383891 157384032 -9266264 - B1_Mur1 SINE Alu -5 144 2 7 1785 412 264 8 97 chrX 157384032 157384091 -9266205 - B4 SINE B4 -66 226 171 7 1785 342 0 0 0 chrX 157384557 157384595 -9265701 + (TTG)n Simple_repeat Simple_repeat 2 39 0 7 1785 621 248 87 39 chrX 157384694 157384900 -9265396 - ID_B1 SINE B4 -8 216 1 7 1785 240 100 0 0 chrX 157385417 157385457 -9264839 + (T)n Simple_repeat Simple_repeat 1 40 0 7 1785 232 294 85 73 chrX 157385526 157385611 -9264685 - FAM SINE Alu -1 310 219 7 1785 1027 227 139 41 chrX 157385611 157385956 -9264340 + MTE2a LTR MaLR 1 379 0 7 1785 348 244 39 1 chrX 157385956 157386035 -9264261 - B1F SINE Alu -60 89 9 7 1785 340 194 3 2 chrX 157386064 157386137 -9264159 - MLT1J LTR MaLR -31 481 351 7 1785 414 363 20 64 chrX 157386163 157386366 -9263930 - MLT1J LTR MaLR -231 281 88 7 1785 279 0 0 0 chrX 157387145 157387176 -9263120 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1785 213 233 49 16 chrX 157387313 157387374 -9262922 - ID SINE ID -143 81 19 7 1785 594 353 89 44 chrX 157387552 157388003 -9262293 + MLT2E LTR ERVL 147 617 -11 7 1785 375 282 0 0 chrX 157388220 157388298 -9261998 - RSINE1 SINE B4 -87 78 1 7 1785 283 252 16 26 chrX 157388547 157388625 -9261671 + PB1D10 SINE Alu 33 108 -12 7 1785 396 0 0 0 chrX 157388715 157388759 -9261537 + (GTGTG)n Simple_repeat Simple_repeat 1 44 0 7 1785 767 296 65 18 chrX 157388824 157389099 -9261197 - B4A SINE B4 -2 290 3 7 1785 718 206 140 11 chrX 157389168 157389197 -9261099 - B3 SINE B2 -5 211 183 7 1785 279 0 0 0 chrX 157389197 157389228 -9261068 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 1785 718 206 140 11 chrX 157389228 157389384 -9260912 - B3 SINE B2 -34 182 2 7 1785 409 284 26 8 chrX 157390824 157390941 -9259355 - B1F SINE Alu -21 128 10 8 1785 544 240 19 70 chrX 157391691 157391848 -9258448 + B1F1 SINE Alu 1 149 0 8 1785 203 23 43 43 chrX 157392377 157392423 -9257873 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 8 1785 1184 68 0 0 chrX 157392424 157392571 -9257725 - B1_Mus1 SINE Alu 0 148 2 8 1785 486 324 0 0 chrX 157392596 157392707 -9257589 + ID_B1 SINE B4 93 203 -21 8 1785 25 0 0 0 chrX 157392751 157392776 -9257520 + AT_rich Low_complexity Low_complexity 1 25 0 8 1785 514 275 92 0 chrX 157392794 157392914 -9257382 + B1F1 SINE Alu 10 140 -9 8 1785 530 254 127 0 chrX 157392922 157393056 -9257240 + RSINE1 SINE B4 2 152 -13 8 1785 908 229 58 0 chrX 157393063 157393251 -9257045 + B3 SINE B2 1 199 -17 8 1785 347 271 149 16 chrX 157393319 157393574 -9256722 + L1M5 LINE L1 4479 4767 -1379 8 1785 333 309 238 25 chrX 157393640 157393922 -9256374 + L1M5 LINE L1 4892 5233 -913 8 1785 250 192 38 13 chrX 157393935 157394014 -9256282 - MER97c DNA MER1_type? -950 140 60 8 1785 230 322 43 32 chrX 157394422 157394515 -9255781 + PB1D9 SINE Alu 26 119 -1 8 1785 392 329 20 40 chrX 157394552 157394704 -9255592 + RSINE1 SINE B4 4 152 -13 8 1785 532 240 14 120 chrX 157394805 157394947 -9255349 - B1_Mur2 SINE Alu -22 127 1 8 1785 1212 185 10 5 chrX 157395149 157395350 -9254946 + B3 SINE B2 2 203 -13 8 1785 626 181 88 22 chrX 157395375 157395511 -9254785 - B1_Mus2 SINE Alu 0 147 3 8 1785 454 223 17 67 chrX 157395683 157395803 -9254493 + PB1D7 SINE Alu 1 114 -6 8 1785 259 214 50 67 chrX 157395852 157395912 -9254384 + PB1D10 SINE Alu 13 71 -46 8 1785 192 77 0 0 chrX 157396041 157396067 -9254229 + (T)n Simple_repeat Simple_repeat 1 26 0 8 1785 904 157 7 0 chrX 157396197 157396344 -9253952 + B1_Mur3 SINE Alu 2 149 0 8 1785 183 139 0 0 chrX 157396380 157396416 -9253880 + (CAAGA)n Simple_repeat Simple_repeat 3 38 0 8 1785 535 274 16 0 chrX 157396429 157396553 -9253743 - B1F2 SINE Alu -20 129 4 8 1785 441 300 14 21 chrX 157396553 157396567 -9253729 - ID_B1 SINE B4 -13 206 70 8 1785 273 262 163 78 chrX 157397717 157397870 -9252426 - MER5A DNA MER1_type -1 188 23 8 1785 401 247 13 0 chrX 157398276 157398353 -9251943 + ID4 SINE ID 3 80 -3 8 1785 17050 60 10 1 chrX 157398572 157400895 -9249401 + L1Md_F2 LINE L1 3242 5586 -297 8 1785 7874 58 2 4 chrX 157400895 157401889 -9248407 + L1Md_F2 LINE L1 5587 6578 -4 8 1785 222 391 0 0 chrX 157402621 157402685 -9247611 + PB1D10 SINE Alu 13 76 -41 8 1785 1322 153 0 13 chrX 157403167 157403392 -9246904 + URR1A DNA MER1_type 5 226 0 8 1785 506 255 82 56 chrX 157403393 157403588 -9246708 + MER3 DNA MER1_type 9 208 -1 8 1785 504 86 0 0 chrX 157404214 157404284 -9246012 + (TA)n Simple_repeat Simple_repeat 2 71 0 8 1785 630 245 7 0 chrX 157405488 157405635 -9244661 - B1F SINE Alu -1 148 1 8 1785 803 285 99 42 chrX 157405638 157406041 -9244255 + Tigger13a DNA MER2_type 141 566 -205 8 1785 725 268 42 12 chrX 157406063 157406218 -9244078 + B3A SINE B2 1 161 -37 8 1785 465 19 0 0 chrX 157406218 157406272 -9244024 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 1785 195 222 0 0 chrX 157406286 157406331 -9243965 + CT-rich Low_complexity Low_complexity 3 47 0 8 1785 272 324 103 0 chrX 157407512 157407580 -9242716 - B1F1 SINE Alu -72 77 3 8 1785 1188 47 0 7 chrX 157407890 157408039 -9242257 - B1_Mus1 SINE Alu 0 148 1 8 1785 340 287 96 0 chrX 157408364 157408458 -9241838 + ID_B1 SINE B4 67 169 -55 8 1785 693 0 0 0 chrX 157408485 157408562 -9241734 + (GAGAA)n Simple_repeat Simple_repeat 3 79 0 8 1785 597 233 0 17 chrX 157409025 157409143 -9241153 + B1_Mur1 SINE Alu 33 148 -1 8 1785 219 302 31 70 chrX 157409246 157409374 -9240922 - L2 LINE L2 -1340 2079 1957 8 1785 575 292 73 34 chrX 157409533 157409710 -9240586 - B3A SINE B2 -13 185 2 8 1785 584 135 446 0 chrX 157409769 157409917 -9240379 + B3 SINE B2 1 214 -2 8 1785 23 33 0 0 chrX 157409917 157409947 -9240349 + AT_rich Low_complexity Low_complexity 1 30 0 8 1785 560 222 26 0 chrX 157409997 157410114 -9240182 - MER20 DNA MER1_type 0 219 100 8 1785 527 292 29 0 chrX 157410551 157410688 -9239608 + B1_Mur2 SINE Alu 2 142 -7 8 1785 350 280 42 139 chrX 157410693 157410922 -9239374 + MLT1A1 LTR MaLR 77 298 -67 8 1785 522 57 0 0 chrX 157411537 157411607 -9238689 + (GA)n Simple_repeat Simple_repeat 1 70 0 8 1785 984 134 7 7 chrX 157411762 157411912 -9238384 + B1_Mur4 SINE Alu 1 150 0 8 1785 481 294 117 58 chrX 157412297 157412503 -9237793 + B4 SINE B4 3 220 -72 8 1785 548 272 0 42 chrX 157412536 157412678 -9237618 + RSINE1 SINE B4 24 159 -6 8 1785 645 160 62 31 chrX 157413033 157413151 -9237145 + B1_Mur4 SINE Alu 18 140 -10 8 1785 186 43 0 0 chrX 157413151 157413174 -9237122 + (CCAA)n Simple_repeat Simple_repeat 2 24 0 8 1785 273 343 29 10 chrX 157413760 157413863 -9236433 + RMER5 LTR ERV1 373 477 -57 8 1785 624 91 0 0 chrX 157414818 157414906 -9235390 + (GAAA)n Simple_repeat Simple_repeat 1 88 0 8 1785 513 290 108 17 chrX 157414954 157415371 -9234925 + L1MCc LINE L1 1080 1534 -4889 8 1785 966 84 27 47 chrX 157415404 157415554 -9234742 + B1_Mus1 SINE Alu 2 148 0 8 1785 220 83 42 0 chrX 157415554 157415602 -9234694 + (CAAAAA)n Simple_repeat Simple_repeat 6 55 0 8 1785 268 234 118 59 chrX 157415727 157415863 -9234433 + L1MCc LINE L1 1884 2027 -5010 8 1785 658 274 16 27 chrX 157416013 157416197 -9234099 + B3A SINE B2 1 182 -16 8 1785 249 308 7 0 chrX 157416700 157416794 -9233502 + GA-rich Low_complexity Low_complexity 1 94 0 8 1785 256 162 28 42 chrX 157417016 157417087 -9233209 - Lx4B LINE L1 -2 7056 6987 8 1785 197 289 0 0 chrX 157417324 157417369 -9232927 - L2c LINE L2 -15 3372 3328 8 1786 366 270 120 63 chrX 157418652 157418810 -9231486 + B4A SINE B4 2 168 -124 8 1786 969 166 106 5 chrX 157419705 157419893 -9230403 + B3 SINE B2 1 207 -9 8 1786 687 246 106 6 chrX 157419962 157420142 -9230154 - B3A SINE B2 0 198 1 8 1786 336 24 0 0 chrX 157420356 157420397 -9229899 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 1786 233 325 140 24 chrX 157420416 157420580 -9229716 + L2b LINE L2 2999 3181 -194 8 1786 232 178 22 0 chrX 157420652 157420697 -9229599 + L2b LINE L2 3325 3370 -5 8 1786 202 189 0 0 chrX 157420944 157420981 -9229315 + (CCA)n Simple_repeat Simple_repeat 3 39 0 8 1786 912 204 65 15 chrX 157421011 157421210 -9229086 + B3 SINE B2 2 210 -6 8 1786 605 310 56 74 chrX 157421562 157421778 -9228518 - B4A SINE B4 0 292 81 8 1786 4963 166 52 7 chrX 157421831 157422726 -9227570 + Lx5 LINE L1 6110 7045 -5 8 1786 250 146 42 0 chrX 157422745 157422793 -9227503 - Lx6 LINE L1 -19 7441 7392 8 1786 189 196 0 0 chrX 157422921 157422977 -9227319 + (CA)n Simple_repeat Simple_repeat 1 56 0 8 1786 396 250 12 23 chrX 157423105 157423191 -9227105 - B4A SINE B4 -206 86 2 8 1786 532 292 12 30 chrX 157423343 157423509 -9226787 + RSINE1 SINE B4 3 165 0 8 1786 204 40 0 0 chrX 157423544 157423569 -9226727 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 8 1786 324 328 72 52 chrX 157423570 157423763 -9226533 + B3A SINE B2 2 198 0 8 1786 27 29 0 0 chrX 157423763 157423797 -9226499 + AT_rich Low_complexity Low_complexity 1 34 0 8 1786 786 253 11 48 chrX 157423878 157424065 -9226231 + B3A SINE B2 4 183 -15 8 1786 1489 34 17 0 chrX 157424307 157424484 -9225812 - B2_Mm2 SINE B2 -14 181 2 8 1786 634 253 124 16 chrX 157425080 157425265 -9225031 + ID_B1 SINE B4 2 206 -18 8 1786 550 308 39 0 chrX 157425384 157425540 -9224756 + RSINE1 SINE B4 4 165 0 8 1786 23 20 0 39 chrX 157425616 157425629 -9224667 + AT_rich Low_complexity Low_complexity 1 13 0 8 1786 1167 62 14 0 chrX 157425629 157425775 -9224521 + B1_Mus1 SINE Alu 1 148 0 8 1786 23 20 0 39 chrX 157425775 157425795 -9224501 + AT_rich Low_complexity Low_complexity 1 20 0 8 1786 1239 80 15 46 chrX 157425795 157425992 -9224304 + B2_Mm2 SINE B2 2 192 -3 8 1786 23 20 0 39 chrX 157425992 157426009 -9224287 + AT_rich Low_complexity Low_complexity 1 17 0 8 1786 705 250 0 7 chrX 157426198 157426339 -9223957 + B1_Mur1 SINE Alu 5 144 -5 8 1786 745 217 7 0 chrX 157426609 157426752 -9223544 + RSINE1 SINE B4 4 147 -18 8 1786 225 65 0 0 chrX 157426906 157426937 -9223359 + (TAA)n Simple_repeat Simple_repeat 2 32 0 8 1786 338 267 178 0 chrX 157426945 157427035 -9223261 - B1F1 SINE Alu -37 112 7 8 1786 264 317 85 0 chrX 157426996 157427078 -9223218 - ID_B1 SINE B4 -98 126 38 8 1786 395 301 24 8 chrX 157427063 157427187 -9223109 - ID_B1 SINE B4 -98 126 1 8 1786 768 256 65 96 chrX 157427270 157427469 -9222827 + B3A SINE B2 1 193 -2 8 1786 1439 44 55 0 chrX 157427472 157427654 -9222642 + B2_Mm2 SINE B2 2 193 -2 8 1786 274 216 20 0 chrX 157427922 157427973 -9222323 + ID4 SINE ID 6 57 -26 8 1786 223 326 40 30 chrX 157428466 157428567 -9221729 + MIRb SINE MIR 22 123 -145 8 1786 656 207 8 0 chrX 157429073 157429194 -9221102 + B1F SINE Alu 28 149 0 8 1786 28 0 0 0 chrX 157430469 157430497 -9219799 + AT_rich Low_complexity Low_complexity 1 28 0 8 1786 200 305 0 0 chrX 157430822 157430881 -9219415 + C-rich Low_complexity Low_complexity 3 61 0 9 1786 275 104 21 0 chrX 157431765 157431813 -9218483 + (GAAAA)n Simple_repeat Simple_repeat 2 50 0 9 1786 203 330 0 21 chrX 157432996 157433089 -9217207 + G-rich Low_complexity Low_complexity 3 93 0 9 1786 312 270 29 29 chrX 157434603 157434706 -9215590 - MER53 DNA hAT 0 193 91 9 1786 356 232 29 48 chrX 157434778 157434882 -9215414 - MER53 DNA hAT -74 119 18 9 1786 485 277 21 0 chrX 157435533 157435674 -9214622 + B1F2 SINE Alu 5 148 -1 9 1786 724 260 14 72 chrX 157435989 157436196 -9214100 + B4 SINE B4 1 195 -97 9 1786 244 293 28 83 chrX 157436105 157436213 -9214083 + B1_Mur1 SINE Alu 21 122 -27 9 1786 320 331 12 65 chrX 157436344 157436378 -9213918 + ID_B1 SINE B4 66 224 0 9 1786 617 221 0 22 chrX 157436378 157436512 -9213784 + B1_Mur2 SINE Alu 19 149 0 9 1786 1080 95 14 0 chrX 157436558 157436706 -9213590 + B1_Mur4 SINE Alu 1 150 0 9 1786 289 286 60 0 chrX 157436865 157436949 -9213347 + B1F SINE Alu 10 98 -51 9 1786 324 0 0 0 chrX 157436958 157436994 -9213302 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 9 1786 964 274 38 0 chrX 157436996 157437208 -9213088 + ID_B1 SINE B4 5 224 0 9 1786 396 312 130 0 chrX 157437277 157437415 -9212881 + MIR SINE MIR 15 170 -92 9 1786 854 265 23 23 chrX 157437932 157438152 -9212144 + ID_B1 SINE B4 1 220 -4 9 1786 398 304 88 0 chrX 157438416 157438518 -9211778 + RSINE1 SINE B4 9 119 -46 9 1786 252 0 0 0 chrX 157438521 157438549 -9211747 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 1786 748 313 192 28 chrX 157438583 157438996 -9211300 + MLT1F1 LTR MaLR 75 555 -14 9 1786 192 340 64 28 chrX 157439030 157439139 -9211157 - MIR SINE MIR -146 116 4 9 1786 276 280 148 10 chrX 157439300 157439401 -9210895 - B1F SINE Alu -34 115 1 9 1786 676 284 40 44 chrX 157439793 157440018 -9210278 + ID_B1 SINE B4 1 224 0 9 1786 304 234 26 13 chrX 157440043 157440121 -9210175 + B1F2 SINE Alu 7 85 -64 9 1786 208 376 0 56 chrX 157440157 157440247 -9210049 + L2c LINE L2 3299 3383 -4 9 1786 1017 266 171 0 chrX 157440457 157440796 -9209500 + MTD LTR MaLR 18 414 -5 9 1786 1487 268 117 15 chrX 157440855 157441149 -9209147 + MLT2B2 LTR ERVL 1 326 -189 9 1786 525 32 0 0 chrX 157441149 157441212 -9209084 + (CA)n Simple_repeat Simple_repeat 1 63 0 9 1786 1487 268 117 15 chrX 157441212 157441380 -9208916 + MLT2B2 LTR ERVL 327 509 -6 9 1786 8579 168 56 42 chrX 157441515 157443085 -9207211 + L1MB8 LINE L1 890 2499 -3348 9 1786 505 216 259 40 chrX 157443085 157443259 -9207037 - B3 SINE B2 0 216 5 9 1786 8853 182 63 66 chrX 157443259 157444009 -9206287 + L1MB8 LINE L1 2500 3238 -2609 9 1786 947 62 0 15 chrX 157444009 157444141 -9206155 + (GAAA)n Simple_repeat Simple_repeat 2 131 0 9 1786 8853 182 63 66 chrX 157444141 157445314 -9204982 + L1MB8 LINE L1 3239 4431 -1416 9 1786 4827 176 62 10 chrX 157445314 157446202 -9204094 + Lx5 LINE L1 6117 7050 0 9 1786 189 0 0 0 chrX 157446203 157446224 -9204072 + (CA)n Simple_repeat Simple_repeat 2 22 0 9 1786 1288 61 98 0 chrX 157446381 157446545 -9203751 + B2_Mm2 SINE B2 2 181 -14 9 1786 1678 207 62 18 chrX 157446552 157446968 -9203328 + L1MB8 LINE L1 5112 5528 -319 9 1786 3160 189 102 3 chrX 157446987 157447660 -9202636 + Lx9 LINE L1 6886 7625 -19 9 1786 258 32 0 0 chrX 157447673 157447704 -9202592 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 1786 391 304 55 23 chrX 157447716 157447844 -9202452 + B4A SINE B4 2 133 -159 9 1786 369 284 48 82 chrX 157447844 157447862 -9202434 + B3A SINE B2 2 142 -56 9 1786 246 267 0 26 chrX 157447928 157448005 -9202291 - Lx7 LINE L1 -1678 6018 5944 9 1786 2345 193 117 30 chrX 157448034 157448642 -9201654 + Lx7 LINE L1 7036 7696 0 9 1786 324 0 0 0 chrX 157448901 157448937 -9201359 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 1786 534 242 28 77 chrX 157449361 157449504 -9200792 + ID_B1 SINE B4 86 221 -3 9 1786 283 242 46 126 chrX 157449377 157449528 -9200768 - YREP_Mm Unknown Unknown -1516 296 158 9 1786 242 286 51 13 chrX 157449620 157449698 -9200598 + ID4_ SINE ID 2 82 -1 9 1786 560 280 179 21 chrX 157449889 157450079 -9200217 + ID_B1 SINE B4 1 220 -4 9 1786 480 286 134 53 chrX 157450176 157450665 -9199631 + MLT1F LTR MaLR 4 566 -13 9 1786 414 296 51 146 chrX 157450675 157450991 -9199305 + B4A SINE B4 2 287 -5 9 1786 669 219 0 0 chrX 157451552 157451707 -9198589 + (TA)n Simple_repeat Simple_repeat 1 155 0 9 1786 344 91 0 0 chrX 157451707 157451751 -9198545 - HAL1-3A_ME LINE L1 -846 2012 1969 9 1786 506 296 0 21 chrX 157451767 157451912 -9198384 + B1F2 SINE Alu 1 142 -7 9 1786 443 209 60 17 chrX 157452355 157452472 -9197824 + L1MB8 LINE L1 5702 5823 -361 9 1786 816 248 77 10 chrX 157452556 157452764 -9197532 + L1MB8 LINE L1 5818 6039 -139 9 1786 1177 158 40 128 chrX 157452820 157453147 -9197149 + MYSERV-int LTR ERVK 6251 6548 -2 9 1786 2707 144 18 20 chrX 157453149 157453603 -9196693 + RLTR11B LTR ERVK 1 453 0 9 1786 301 253 99 44 chrX 157453906 157453997 -9196299 + LTR16A LTR ERVL 356 451 0 9 1786 298 126 0 75 chrX 157454010 157454104 -9196192 + CT-rich Low_complexity Low_complexity 4 90 0 9 1786 732 244 67 22 chrX 157454110 157454290 -9196006 - ID_B1 SINE B4 -29 195 8 9 1786 590 269 101 42 chrX 157454630 157454810 -9195486 + B3 SINE B2 39 210 -6 9 1786 688 328 37 30 chrX 157454823 157455093 -9195203 + MLT1B LTR MaLR 115 386 -4 9 1786 565 272 61 7 chrX 157455628 157455776 -9194520 - RSINE1 SINE B4 -8 157 2 9 1786 319 338 0 0 chrX 157455786 157455866 -9194430 - ID4_ SINE ID 0 83 4 9 1786 1309 247 91 21 chrX 157455866 157456239 -9194057 - MLT1C LTR MaLR -67 400 2 9 1786 386 302 73 32 chrX 157456423 157456546 -9193750 - B1F SINE Alu -20 129 2 9 1786 372 224 123 13 chrX 157456558 157456679 -9193617 - PB1D7 SINE Alu -21 128 6 9 1786 444 215 0 12 chrX 157456871 157456951 -9193345 + ID4 SINE ID 1 79 -4 9 1786 1496 49 5 47 chrX 157457176 157457369 -9192927 - B2_Mm1t SINE B2 -8 185 1 9 1786 934 221 47 38 chrX 157457951 157458163 -9192133 - ID_B1 SINE B4 -9 215 2 9 1786 475 151 0 27 chrX 157458203 157458278 -9192018 - ID4_ SINE ID -9 74 2 9 1786 1233 113 51 0 chrX 157458572 157458749 -9191547 + B2_Mm2 SINE B2 1 186 -9 9 1786 309 292 108 59 chrX 157458770 157458872 -9191424 + ID_B1 SINE B4 87 193 -31 9 1786 238 281 93 10 chrX 157458787 157458884 -9191412 - YREP_Mm Unknown Unknown -1520 292 188 9 1786 309 89 0 0 chrX 157458893 157458938 -9191358 + (GA)n Simple_repeat Simple_repeat 2 46 0 9 1786 832 225 124 16 chrX 157458978 157459172 -9191124 - B3 SINE B2 -1 215 1 9 1786 371 307 65 26 chrX 157459880 157460034 -9190262 + RSINE1 SINE B4 3 162 -3 9 1786 487 169 0 16 chrX 157460234 157460360 -9189936 + CT-rich Low_complexity Low_complexity 1 124 0 9 1786 463 181 0 35 chrX 157460421 157460507 -9189789 - ID_B1 SINE B4 -2 222 140 9 1786 398 279 41 41 chrX 157460598 157460744 -9189552 - B1_Mur1 SINE Alu -1 148 3 9 1786 232 298 149 0 chrX 157460763 157460857 -9189439 - ID_B1 SINE B4 0 224 117 9 1786 786 286 47 28 chrX 157460857 157461026 -9189270 - B3 SINE B2 0 216 43 9 1786 2159 162 11 24 chrX 157461026 157461398 -9188898 - ORR1B2 LTR MaLR 0 367 1 9 1786 786 286 47 28 chrX 157461398 157461440 -9188856 - B3 SINE B2 -174 42 1 9 1786 421 188 0 0 chrX 157461442 157461511 -9188785 - ID_B1 SINE B4 -69 155 87 9 1786 432 0 0 0 chrX 157461758 157461806 -9188490 + (TC)n Simple_repeat Simple_repeat 1 48 0 9 1786 466 329 17 100 chrX 157461826 157461900 -9188396 - ID_B1 SINE B4 -3 221 149 9 1786 1425 73 28 0 chrX 157461900 157462078 -9188218 - B2_Mm1t SINE B2 -9 184 2 9 1786 466 329 17 100 chrX 157462078 157462243 -9188053 - ID_B1 SINE B4 -76 148 2 9 1786 247 300 12 48 chrX 157463015 157463028 -9187268 - ID SINE ID -142 82 70 9 1786 513 0 0 0 chrX 157463028 157463085 -9187211 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 9 1786 247 300 12 48 chrX 157463085 157463155 -9187141 - ID SINE ID -155 69 2 9 1786 466 280 28 14 chrX 157463164 157463309 -9186987 - B1F1 SINE Alu -2 147 1 9 1786 324 70 0 0 chrX 157463317 157463360 -9186936 + (TATG)n Simple_repeat Simple_repeat 2 44 0 9 1786 652 298 126 24 chrX 157463385 157463639 -9186657 - B4 SINE B4 -12 280 1 9 1786 1659 244 54 21 chrX 157463640 157464105 -9186191 + RCHARR1 DNA MER1_type 51 530 -444 9 1786 612 243 13 57 chrX 157464105 157464262 -9186034 + RSINE1 SINE B4 3 152 -13 9 1786 267 31 0 0 chrX 157464344 157464376 -9185920 + (TGG)n Simple_repeat Simple_repeat 2 33 0 9 1786 435 38 0 0 chrX 157464378 157464431 -9185865 + (TTTC)n Simple_repeat Simple_repeat 2 54 0 9 1786 908 118 62 8 chrX 157464431 157464559 -9185737 - B1_Mus2 SINE Alu -12 135 1 9 1786 1793 225 25 9 chrX 157464570 157465014 -9185282 + RCHARR1 DNA MER1_type 522 972 -2 9 1786 387 0 0 0 chrX 157465124 157465167 -9185129 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 1786 236 294 45 34 chrX 157465206 157465294 -9185002 - LTR33A_ LTR ERVL -373 158 70 9 1786 7039 72 20 8 chrX 157465358 157466303 -9183993 + L1_Mus3 LINE L1 5683 6638 0 9 1786 279 54 0 0 chrX 157466411 157466448 -9183848 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 1786 715 237 21 14 chrX 157466455 157466596 -9183700 - B1_Mur1 SINE Alu -3 146 5 9 1786 327 192 0 0 chrX 157466684 157466762 -9183534 + (TA)n Simple_repeat Simple_repeat 2 79 0 9 1786 526 270 44 0 chrX 157467047 157467184 -9183112 - ID_B1 SINE B4 0 224 82 9 1786 698 253 0 14 chrX 157467223 157467371 -9182925 - B1F1 SINE Alu -3 146 1 9 1786 1020 234 54 0 chrX 157467396 157467601 -9182695 - B3 SINE B2 0 216 1 9 1786 382 241 0 12 chrX 157468569 157468653 -9181643 + PB1D10 SINE Alu 1 83 -34 9 1786 234 0 0 0 chrX 157468653 157468679 -9181617 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 9 1786 690 264 81 0 chrX 157468711 157468859 -9181437 + B3A SINE B2 1 160 -38 9 1786 222 200 0 0 chrX 157468864 157468904 -9181392 + CT-rich Low_complexity Low_complexity 1 40 0 1 1786 524 261 30 0 chrX 157468970 157469104 -9181192 + RMER1B Other Other 575 712 -354 1 1786 4395 225 20 126 chrX 157469287 157469678 -9180618 + RMER1C Other Other 45 397 -945 1 1786 342 0 0 0 chrX 157469678 157469716 -9180580 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1786 4395 225 20 126 chrX 157469716 157470376 -9179920 + RMER1C Other Other 398 986 -356 1 1786 339 25 0 0 chrX 157470376 157470416 -9179880 + (TCC)n Simple_repeat Simple_repeat 1 40 0 1 1786 4395 225 20 126 chrX 157470416 157470811 -9179485 + RMER1C Other Other 987 1338 -4 1 1786 373 203 0 0 chrX 157470813 157470872 -9179424 + B1_Mur2 SINE Alu 53 111 -38 1 1786 396 0 0 0 chrX 157470982 157471026 -9179270 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 1 1786 22 35 0 0 chrX 157471040 157471069 -9179227 + AT_rich Low_complexity Low_complexity 1 29 0 1 1786 466 356 0 0 chrX 157471081 157471199 -9179097 + RSINE1 SINE B4 44 161 -4 1 1786 514 238 45 45 chrX 157471530 157471684 -9178612 + ID_B1 SINE B4 71 224 0 1 1786 656 326 6 0 chrX 157471708 157471886 -9178410 + B4A SINE B4 114 292 0 1 1786 266 183 80 53 chrX 157471971 157472046 -9178250 + PB1D9 SINE Alu 10 86 -34 1 1786 252 0 0 0 chrX 157472054 157472082 -9178214 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 1786 283 203 188 0 chrX 157472406 157472475 -9177821 + B4A SINE B4 3 84 -208 1 1786 565 297 7 40 chrX 157472492 157472643 -9177653 + B4A SINE B4 143 288 -4 1 1786 452 250 77 8 chrX 157472762 157472879 -9177417 - B1F2 SINE Alu -8 141 17 1 1786 228 67 0 0 chrX 157472892 157472922 -9177374 + (TTG)n Simple_repeat Simple_repeat 2 31 0 1 1786 237 260 169 0 chrX 157473441 157473518 -9176778 - ID_B1 SINE B4 -8 216 127 1 1786 260 27 27 0 chrX 157473645 157473682 -9176614 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 1786 393 39 0 0 chrX 157473682 157473733 -9176563 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1786 673 266 29 0 chrX 157473735 157473874 -9176422 - RSINE1 SINE B4 -20 145 3 1 1786 318 50 0 0 chrX 157474404 157474444 -9175852 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1 1786 702 247 146 0 chrX 157474447 157474625 -9175671 - ID_B1 SINE B4 -17 207 4 1 1786 2680 92 43 58 chrX 157474646 157475063 -9175233 + RLTR10A LTR ERVK 1 411 0 1 1786 731 246 36 41 chrX 157475087 157475282 -9175014 - B3A SINE B2 -4 194 1 1 1786 21 36 0 0 chrX 157475435 157475463 -9174833 + AT_rich Low_complexity Low_complexity 1 28 0 1 1786 225 0 0 0 chrX 157475478 157475503 -9174793 + (TTTTA)n Simple_repeat Simple_repeat 4 28 0 1 1786 963 63 14 20 chrX 157475510 157475701 -9174595 - L1Md_F2 LINE L1 0 6582 6438 1 1786 2125 55 0 0 chrX 157475701 157475958 -9174338 + L1Md_F2 LINE L1 5705 5961 -621 1 1786 724 226 0 0 chrX 157475977 157476101 -9174195 - B3A SINE B2 -72 126 3 1 1786 1433 117 87 0 chrX 157476101 157476307 -9173989 + URR1B DNA MER1_type 1 224 -1 1 1786 327 296 125 83 chrX 157476568 157476849 -9173447 + MamRep434 DNA TcMar 63 356 -70 1 1786 919 256 43 19 chrX 157476849 157477060 -9173236 + B3 SINE B2 1 216 0 1 1786 327 296 125 83 chrX 157477060 157477091 -9173205 + MamRep434 DNA TcMar 357 387 -39 1 1786 481 322 20 0 chrX 157477209 157477355 -9172941 - B1F1 SINE Alu 0 149 1 1 1786 248 227 0 0 chrX 157477397 157477441 -9172855 + B4A SINE B4 2 45 -247 1 1786 243 0 0 0 chrX 157477700 157477727 -9172569 + (TTA)n Simple_repeat Simple_repeat 3 29 0 1 1786 292 322 17 17 chrX 157477727 157477844 -9172452 + RLTR33 LTR ERVK 515 631 -47 1 1786 563 217 54 0 chrX 157477887 157478016 -9172280 - ORR1D1 LTR MaLR -32 342 207 1 1786 312 200 0 0 chrX 157478114 157478164 -9172132 - PB1D9 SINE Alu -40 80 31 1 1786 186 43 0 0 chrX 157478482 157478505 -9171791 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1786 30 0 0 0 chrX 157478551 157478581 -9171715 + AT_rich Low_complexity Low_complexity 1 30 0 1 1786 679 302 31 0 chrX 157478586 157478745 -9171551 - RSINE1 SINE B4 0 165 2 1 1786 309 270 0 31 chrX 157478768 157478833 -9171463 - B1F SINE Alu -85 64 2 1 1786 301 224 0 17 chrX 157478964 157479023 -9171273 + B3A SINE B2 24 81 -117 1 1786 3251 216 71 110 chrX 157479136 157480151 -9170145 - RMER1C Other Other -3 1339 365 1 1786 840 259 63 21 chrX 157480153 157480390 -9169906 - RMER1C Other Other -699 643 397 1 1786 332 266 21 21 chrX 157480626 157480722 -9169574 - RMER1B Other Other -922 144 49 1 1786 285 243 68 0 chrX 157480705 157480779 -9169517 - RMER1C Other Other -1046 296 218 1 1786 331 194 0 21 chrX 157480779 157480874 -9169422 + (TA)n Simple_repeat Simple_repeat 1 93 0 1 1786 1037 207 88 4 chrX 157480892 157481152 -9169144 - RMER1B Other Other -212 854 596 1 1786 479 290 15 44 chrX 157481173 157481310 -9168986 - ORR1D1 LTR MaLR -207 172 40 1 1786 483 268 10 0 chrX 157481290 157481387 -9168909 - ORR1D1 LTR MaLR -281 98 1 1 1786 236 284 81 0 chrX 157481501 157481575 -9168721 + ID4_ SINE ID 2 81 -2 1 1786 318 132 0 0 chrX 157481588 157481641 -9168655 + (CATA)n Simple_repeat Simple_repeat 2 54 0 1 1786 1676 197 110 8 chrX 157481698 157482071 -9168225 + MTD LTR MaLR 1 411 -8 1 1786 273 352 57 0 chrX 157482624 157482729 -9167567 - B1F SINE Alu -29 120 10 1 1786 363 257 92 58 chrX 157482765 157482885 -9167411 - B1F SINE Alu -7 142 19 1 1786 304 297 87 72 chrX 157482885 157482898 -9167398 - ID_B1 SINE B4 -2 217 83 1 1786 488 128 23 0 chrX 157482931 157483017 -9167279 + CT-rich Low_complexity Low_complexity 3 90 0 1 1786 444 299 4 128 chrX 157483037 157483263 -9167033 - B3A SINE B2 0 198 1 1 1786 615 296 33 0 chrX 157483284 157483436 -9166860 - RSINE1 SINE B4 -4 161 5 1 1786 305 60 20 0 chrX 157483491 157483541 -9166755 - RMER4A LTR ERVK 0 466 416 1 1786 1557 132 39 50 chrX 157483539 157483819 -9166477 - RMER4A LTR ERVK -189 277 1 1 1786 195 42 0 0 chrX 157484004 157484028 -9166268 + (TTTTC)n Simple_repeat Simple_repeat 4 27 0 1 1786 287 205 177 13 chrX 157484028 157484107 -9166189 - 7SK RNA RNA -95 236 145 1 1786 6009 77 81 29 chrX 157484128 157484442 -9165854 - Lx3_Mus LINE L1 -10 6999 6666 1 1786 1172 82 14 0 chrX 157484442 157484588 -9165708 - B1_Mus1 SINE Alu 0 148 1 1 1786 6009 77 81 29 chrX 157484588 157485126 -9165170 - Lx3_Mus LINE L1 -344 6665 6103 1 1786 3527 65 50 0 chrX 157485127 157485602 -9164694 + Lx3_Mus LINE L1 5677 6175 -834 1 1786 456 255 14 62 chrX 157485662 157485808 -9164488 - ID_B1 SINE B4 -1 223 85 1 1786 258 301 142 31 chrX 157485891 157486279 -9164017 - L1M5 LINE L1 -395 5845 5415 1 1786 403 311 106 32 chrX 157486384 157486642 -9163654 - RMER20B LTR ERVK -223 404 132 1 1786 6788 282 51 24 chrX 157486794 157487512 -9162784 - MERVK26-int LTR ERVK -2 6917 6172 1 1786 360 0 0 0 chrX 157487512 157487552 -9162744 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1786 6788 282 51 24 chrX 157487552 157488956 -9161340 - MERVK26-int LTR ERVK -748 6171 4739 1 1786 3399 157 24 2 chrX 157488960 157489508 -9160788 + RMER19B LTR ERVK 1 560 -342 1 1786 3980 288 50 45 chrX 157489512 157491036 -9159260 - MERVK26-int LTR ERVK -4217 2702 1170 1 1786 5707 85 51 25 chrX 157491738 157492524 -9157772 - RLTR13D1 LTR ERVK 0 806 1 1 1786 820 58 0 0 chrX 157492614 157492717 -9157579 + RMER17A LTR ERVK 1 103 -648 1 1786 322 162 13 51 chrX 157492716 157492794 -9157502 - RLTR11A2 LTR ERVK -358 169 95 1 1786 810 144 14 0 chrX 157492804 157492943 -9157353 - RLTR15 LTR ERVK -218 141 1 1 1786 4164 237 58 35 chrX 157492945 157494235 -9156061 - MYSERV16_I-int LTR ERVK -2 2324 1005 1 1786 38744 33 0 0 chrX 157494251 157500000 -9150296 - L1Md_T LINE L1 0 6585 740 1 1786 6040 12 0 0 chrX 157500000 157500680 -9149616 - L1Md_Gf LINE L1 -5783 739 60 1 1786 231 279 59 0 chrX 157500715 157500783 -9149513 - RMER4A LTR ERVK -87 379 308 2 1786 1552 204 7 7 chrX 157500822 157501118 -9149178 - MYSERV-int LTR ERVK -1945 4605 4310 3 1786 556 312 20 56 chrX 157501500 157501751 -9148545 - RLTR26 LTR ERVK -224 418 177 4 1786 537 240 8 55 chrX 157502136 157502264 -9148032 - B1_Mur3 SINE Alu -10 139 18 5 1786 403 234 54 9 chrX 157502722 157502834 -9147462 - RLTR18-int LTR ERVK -525 4836 4720 6 1786 520 140 200 14 chrX 157502877 157503022 -9147274 - MYSERV6-int LTR ERVK -2355 6604 6433 7 1786 3158 69 177 2 chrX 157503024 157503460 -9146836 - RLTR1B LTR ERV1 0 512 1 8 1786 266 246 0 62 chrX 157503579 157503644 -9146652 - B1_Mur4 SINE Alu -42 108 48 9 1786 1942 134 21 95 chrX 157504282 157504416 -9145880 - RLTR15 LTR ERVK 0 359 227 1 1786 1245 41 0 0 chrX 157504416 157504563 -9145733 + B1_Mm SINE Alu 1 147 0 1 1786 1942 134 21 95 chrX 157504563 157504816 -9145480 - RLTR15 LTR ERVK -133 226 1 1 1786 655 331 36 24 chrX 157504816 157505064 -9145232 - B4 SINE B4 -39 253 3 1 1786 2298 132 5 17 chrX 157505178 157505587 -9144709 - RMER6A LTR ERVK -8 748 345 1 1786 367 225 0 0 chrX 157505616 157505687 -9144609 - B1_Mus2 SINE Alu -74 73 3 1 1786 502 178 0 137 chrX 157505687 157505783 -9144513 - MT2B LTR ERVL -342 259 181 1 1786 472 163 50 10 chrX 157505767 157505866 -9144430 - RMER6A LTR ERVK -579 111 9 1 1786 222 37 0 0 chrX 157505944 157505971 -9144325 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 1786 326 298 161 40 chrX 157505986 157506259 -9144037 + RLTR42-int LTR ERVK 1560 1865 -3657 1 1786 778 165 51 136 chrX 157506524 157506797 -9143499 + RLTR42-int LTR ERVK 1870 2119 -3403 1 1786 362 265 57 67 chrX 157506823 157507017 -9143279 + RLTR42-int LTR ERVK 2505 2696 -3441 1 1786 493 163 78 123 chrX 157507251 157507405 -9142891 + RLTR42-int LTR ERVK 2891 3037 -3100 1 1786 2160 126 53 144 chrX 157507595 157508068 -9142228 + RLTR23 LTR ERV1 1 430 0 1 1786 2925 84 20 2 chrX 157508079 157508472 -9141824 + MTB LTR MaLR 1 400 0 1 1786 1440 220 42 58 chrX 157508695 157508935 -9141361 + RMER10A LTR ERVL 1 235 -207 2 1786 5818 87 18 6 chrX 157508935 157509732 -9140564 + RLTR13D1 LTR ERVK 1 806 0 2 1786 1440 220 42 58 chrX 157509732 157509940 -9140356 + RMER10A LTR ERVL 236 441 -1 2 1786 441 246 82 0 chrX 157510597 157510707 -9139589 + ID_B1 SINE B4 2 120 -104 2 1786 309 366 7 7 chrX 157510863 157510998 -9139298 - B1_Mus1 SINE Alu -6 142 8 2 1786 230 365 35 0 chrX 157511095 157511121 -9139175 - B4A SINE B4 -119 173 86 2 1786 269 305 0 0 chrX 157511121 157511180 -9139116 - B1F1 SINE Alu -90 59 1 2 1786 32 57 0 0 chrX 157511400 157511453 -9138843 + AT_rich Low_complexity Low_complexity 1 53 0 2 1786 337 259 29 81 chrX 157511602 157511774 -9138522 - Lx7 LINE L1 -329 7367 7205 2 1786 324 0 0 0 chrX 157511827 157511863 -9138433 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 2 1786 201 154 0 0 chrX 157511863 157511902 -9138394 + A-rich Low_complexity Low_complexity 2 40 0 2 1786 3158 67 177 2 chrX 157511935 157512371 -9137925 + RLTR1B LTR ERV1 1 512 0 3 1786 49187 42 3 3 chrX 157512371 157518150 -9132146 + MMERGLN-int LTR ERV1 1 5782 -1774 3 1786 936 217 70 5 chrX 157518154 157518339 -9131957 + Lx6 LINE L1 7027 7223 -237 3 1786 3036 70 185 2 chrX 157518341 157518774 -9131522 - RLTR1B LTR ERV1 0 512 1 3 1786 866 20 0 0 chrX 157518774 157518875 -9131421 - MMERGLN-int LTR ERV1 0 7556 7456 3 1786 3503 191 14 64 chrX 157518877 157519336 -9130960 - L1_Mur2 LINE L1 -427 5450 4995 3 1786 1073 122 0 0 chrX 157519336 157519483 -9130813 - B1_Mus2 SINE Alu 0 147 1 3 1786 3503 191 14 64 chrX 157519483 157519834 -9130462 - L1_Mur2 LINE L1 -883 4994 4681 3 1786 22 35 0 0 chrX 157520211 157520240 -9130056 + AT_rich Low_complexity Low_complexity 1 29 0 3 1786 207 157 0 0 chrX 157521578 157521629 -9128667 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 3 1786 275 85 21 0 chrX 157521732 157521779 -9128517 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1786 366 127 0 0 chrX 157521780 157521851 -9128445 + (GA)n Simple_repeat Simple_repeat 2 72 0 3 1786 4480 40 0 6 chrX 157521948 157522480 -9127816 - L1Md_F2 LINE L1 -14 6568 6040 3 1786 1206 115 16 0 chrX 157526849 157527032 -9123264 - B2_Mm1a SINE B2 -6 187 2 4 1786 1604 99 45 16 chrX 157529078 157529325 -9120971 - L1Md_F2 LINE L1 -5 6577 6324 4 1786 234 0 0 0 chrX 157529609 157529635 -9120661 + (TC)n Simple_repeat Simple_repeat 1 26 0 4 1786 240 122 0 0 chrX 157529639 157529680 -9120616 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1786 291 85 0 0 chrX 157529779 157529826 -9120470 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1786 305 242 42 0 chrX 157529849 157529969 -9120327 + (CAGAGA)n Simple_repeat Simple_repeat 2 126 0 4 1786 215 391 0 0 chrX 157532017 157532104 -9118192 - PB1 SINE Alu -19 108 22 4 1786 236 177 0 31 chrX 157532495 157532511 -9117785 + (TCCA)n Simple_repeat Simple_repeat 3 18 0 4 1786 315 0 0 0 chrX 157532511 157532546 -9117750 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 1786 236 177 0 31 chrX 157532546 157532593 -9117703 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 4 1786 315 0 0 0 chrX 157532835 157532870 -9117426 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1786 2318 322 21 11 chrX 157534718 157535515 -9114781 - RodERV21-int LTR ERV1 -198 4793 3989 5 1786 543 135 115 0 chrX 157535515 157535619 -9114677 + B2_Mm1t SINE B2 51 166 -27 5 1786 358 136 0 4 chrX 157535702 157535767 -9114529 + B2_Mm2 SINE B2 47 109 -107 5 1786 377 123 15 0 chrX 157535844 157535909 -9114387 + (CATA)n Simple_repeat Simple_repeat 2 67 0 5 1786 376 336 183 27 chrX 157535972 157536377 -9113919 - RodERV21-int LTR ERV1 -1169 3822 3355 5 1786 655 291 33 90 chrX 157536537 157536960 -9113336 - RodERV21-int LTR ERV1 -1897 3094 2696 5 1786 330 285 37 11 chrX 157537185 157537358 -9112938 - RLTR6-int LTR ERV1 -2673 5105 4980 5 1786 6157 80 5 5 chrX 157537614 157538420 -9111876 - RLTR13D1 LTR ERVK 0 806 1 5 1786 3102 54 199 2 chrX 157538824 157539252 -9111044 - RLTR1B LTR ERV1 0 512 1 5 1786 66034 32 2 2 chrX 157539252 157546811 -9103485 - MMERGLN-int LTR ERV1 0 7556 1 5 1786 3101 54 199 2 chrX 157546811 157547239 -9103057 - RLTR1B LTR ERV1 0 512 1 5 1786 261 57 0 0 chrX 157547613 157547648 -9102648 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 5 1786 261 0 0 0 chrX 157547805 157547834 -9102462 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 5 1786 357 82 0 0 chrX 157547860 157547909 -9102387 + (GGGA)n Simple_repeat Simple_repeat 2 50 0 6 1786 207 0 0 0 chrX 157548117 157548140 -9102156 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1787 937 147 11 11 chrX 157548836 157549015 -9101281 + GA-rich Low_complexity Low_complexity 1 179 0 6 1787 6446 263 61 56 chrX 157549069 157551039 -9099257 - RodERV21-int LTR ERV1 -2283 2708 729 6 1787 1184 244 87 66 chrX 157551017 157551442 -9098854 - RMER17C-int LTR ERVK -2714 524 91 6 1787 328 371 48 62 chrX 157552194 157552697 -9097599 - Lx8 LINE L1 -146 7327 6832 6 1787 526 185 56 62 chrX 157552818 157552979 -9097317 - ORR1C2 LTR MaLR -224 160 1 6 1787 222 235 14 14 chrX 157554088 157554157 -9096139 + (TTG)n Simple_repeat Simple_repeat 3 71 0 6 1787 213 333 0 36 chrX 157555687 157555799 -9094497 + CT-rich Low_complexity Low_complexity 3 110 0 6 1787 183 42 0 0 chrX 157556223 157556247 -9094049 + (TC)n Simple_repeat Simple_repeat 2 25 0 6 1787 297 0 0 0 chrX 157556248 157556281 -9094015 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1787 202 156 44 0 chrX 157556385 157556430 -9093866 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 1787 379 138 11 11 chrX 157556430 157556518 -9093778 + GA-rich Low_complexity Low_complexity 2 89 0 7 1787 180 97 0 0 chrX 157556709 157556740 -9093556 + (T)n Simple_repeat Simple_repeat 1 31 0 7 1787 977 179 11 0 chrX 157560809 157560993 -9089303 - B2_Mm2 SINE B2 -8 187 2 7 1787 555 56 0 0 chrX 157561143 157561214 -9089082 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 7 1787 639 48 0 0 chrX 157563318 157563401 -9086895 + (TC)n Simple_repeat Simple_repeat 2 84 0 7 1787 269 109 18 0 chrX 157563559 157563614 -9086682 + (CAGAGA)n Simple_repeat Simple_repeat 1 56 0 7 1787 1566 36 0 49 chrX 157565285 157565488 -9084808 - B2_Mm1a SINE B2 0 193 1 7 1787 973 166 11 27 chrX 157565673 157565859 -9084437 + B2_Mm1t SINE B2 1 183 -10 7 1787 427 228 70 57 chrX 157567404 157567562 -9082734 - ORR1C2 LTR MaLR -224 160 1 8 1787 1128 141 5 0 chrX 157568511 157568695 -9081601 - B2_Mm1t SINE B2 -7 186 2 8 1787 208 158 17 17 chrX 157568839 157568897 -9081399 + (TTG)n Simple_repeat Simple_repeat 3 60 0 8 1787 273 364 40 52 chrX 157569479 157569960 -9080336 - Lx8 LINE L1 -167 7306 6832 8 1787 525 234 21 35 chrX 157570087 157570229 -9080067 - ORR1C1 LTR MaLR -232 146 7 8 1787 1207 163 5 0 chrX 157570557 157570778 -9079518 - Lx2 LINE L1 -1 6996 6775 8 1787 6254 140 15 3 chrX 157570776 157572279 -9078017 - Lx2 LINE L1 -352 6645 5124 8 1787 372 45 56 70 chrX 157572264 157572335 -9077961 - MusHAL1 LINE L1 -1499 1213 1144 8 1787 5469 51 38 4 chrX 157572365 157573069 -9077227 - L1Md_F2 LINE L1 -19 6563 5836 8 1787 523 171 0 0 chrX 157573069 157573151 -9077145 + tRNA-Leu-TTA tRNA tRNA 5 86 0 8 1787 6219 106 40 26 chrX 157573196 157574981 -9075315 - L1VL4 LINE L1 -1555 2004 191 8 1787 237 159 0 0 chrX 157575119 157575163 -9075133 + (TGGA)n Simple_repeat Simple_repeat 2 45 0 9 1787 264 176 0 0 chrX 157575803 157575871 -9074425 + (TGG)n Simple_repeat Simple_repeat 1 68 0 9 1787 304 270 18 115 chrX 157577419 157577532 -9072764 - L1MD1 LINE L1 -205 6037 5936 9 1787 26 0 0 0 chrX 157577654 157577680 -9072616 + AT_rich Low_complexity Low_complexity 1 26 0 9 1787 7313 74 5 1 chrX 157577680 157579022 -9071274 - L1_Mus1 LINE L1 -1 6566 5218 9 1787 225 108 0 0 chrX 157579312 157579349 -9070947 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 1787 242 338 0 0 chrX 157581595 157581666 -9068630 - PB1 SINE Alu -29 98 28 9 1787 337 271 34 0 chrX 157581904 157582060 -9068236 + (TCTA)n Simple_repeat Simple_repeat 1 161 0 9 1787 227 190 17 0 chrX 157582122 157582180 -9068116 + (TCCA)n Simple_repeat Simple_repeat 4 62 0 9 1787 201 154 0 0 chrX 157582945 157582984 -9067312 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 9 1787 1284 89 0 0 chrX 157583488 157583668 -9066628 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 1 1787 304 0 87 0 chrX 157583668 157583714 -9066582 + (TCCCC)n Simple_repeat Simple_repeat 3 52 0 1 1787 771 117 19 38 chrX 157583759 157583826 -9066470 - L1_Mus3 LINE L1 0 6638 6603 1 1787 2434 65 0 0 chrX 157583826 157584136 -9066160 - L1_Mus2 LINE L1 0 6566 6257 1 1787 771 117 19 38 chrX 157584136 157584257 -9066039 - L1_Mus3 LINE L1 -36 6602 6482 1 1787 285 208 0 0 chrX 157585035 157585112 -9065184 + (TCCA)n Simple_repeat Simple_repeat 1 77 0 1 1787 384 81 65 0 chrX 157585117 157585179 -9065117 + L1_Mus2 LINE L1 6277 6342 -224 1 1787 488 253 61 37 chrX 157585594 157585758 -9064538 - ORR1C2 LTR MaLR -210 174 7 1 1787 489 160 0 0 chrX 157586216 157586322 -9063974 + (TGGA)n Simple_repeat Simple_repeat 1 106 0 1 1787 189 0 0 0 chrX 157586996 157587017 -9063279 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1787 213 333 0 36 chrX 157588473 157588585 -9061711 + CT-rich Low_complexity Low_complexity 3 110 0 1 1787 180 135 0 0 chrX 157589001 157589038 -9061258 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 1 1787 468 0 0 0 chrX 157589056 157589108 -9061188 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 1787 249 98 0 0 chrX 157589220 157589261 -9061035 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1787 180 77 0 0 chrX 157589262 157589288 -9061008 + (CAGAGA)n Simple_repeat Simple_repeat 2 27 0 1 1787 1083 140 39 0 chrX 157593726 157593905 -9056391 - B2_Mm2 SINE B2 -8 187 2 1 1787 958 118 7 0 chrX 157596292 157596428 -9053868 - B1_Mus2 SINE Alu -9 138 2 1 1787 227 379 21 10 chrX 157596486 157596582 -9053714 - 7SK RNA RNA -226 105 9 1 1787 248 320 46 46 chrX 157596583 157596691 -9053605 - PB1D7 SINE Alu 0 120 13 1 1787 23 0 0 0 chrX 157597703 157597726 -9052570 + AT_rich Low_complexity Low_complexity 1 23 0 1 1787 411 216 0 93 chrX 157598451 157598558 -9051738 + MT2B LTR ERVL 168 264 -337 1 1787 976 69 22 22 chrX 157598462 157598596 -9051700 + B1_Mm SINE Alu 14 147 0 1 1787 207 0 0 0 chrX 157598779 157598802 -9051494 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1787 314 319 14 0 chrX 157598804 157598876 -9051420 - ID4 SINE ID -9 74 2 1 1787 22 0 0 0 chrX 157598876 157598898 -9051398 + AT_rich Low_complexity Low_complexity 1 22 0 1 1787 207 230 26 26 chrX 157599186 157599262 -9051034 + (TTTA)n Simple_repeat Simple_repeat 4 79 0 1 1787 24 32 0 0 chrX 157603807 157603838 -9046458 + AT_rich Low_complexity Low_complexity 1 31 0 1 1787 3341 25 5 2 chrX 157603843 157604236 -9046060 - MTA_Mm LTR MaLR 0 396 3 1 1787 255 156 0 0 chrX 157606020 157606065 -9044231 - ID_B1 SINE B4 -1 223 179 1 1787 276 222 45 90 chrX 157606025 157606114 -9044182 - PB1D10 SINE Alu -6 111 27 1 1787 188 0 74 0 chrX 157606195 157606222 -9044074 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1 1787 218 269 0 71 chrX 157606354 157606410 -9043886 - B1F2 SINE Alu -97 52 1 1 1787 24 32 0 0 chrX 157606666 157606697 -9043599 + AT_rich Low_complexity Low_complexity 1 31 0 1 1787 1372 69 53 10 chrX 157606724 157606930 -9043366 - Lx3_Mus LINE L1 -5 7004 6790 1 1787 3024 105 12 14 chrX 157606931 157607521 -9042775 - Lx3_Mus LINE L1 -964 6045 5450 1 1787 569 307 68 8 chrX 157607580 157607779 -9042517 - B3A SINE B2 -8 208 2 1 1787 251 304 85 38 chrX 157607832 157607938 -9042358 - PB1D10 SINE Alu 0 117 7 1 1787 415 291 26 35 chrX 157608960 157609074 -9041222 - PB1D9 SINE Alu -7 113 1 1 1787 922 102 0 16 chrX 157609575 157609704 -9040592 + B1_Mus1 SINE Alu 5 131 -17 1 1787 581 270 0 133 chrX 157609878 157610036 -9040260 - B3A SINE B2 -58 137 1 1 1787 209 346 136 27 chrX 157610076 157610186 -9040110 - MIRm SINE MIR -109 167 46 1 1787 213 122 40 20 chrX 157610262 157610312 -9039984 + A-rich Low_complexity Low_complexity 2 52 0 1 1787 416 117 8 133 chrX 157610321 157610449 -9039847 - Lx2A1 LINE L1 0 7008 6897 1 1787 219 154 0 0 chrX 157610746 157610785 -9039511 + T-rich Low_complexity Low_complexity 1 39 0 1 1787 1158 68 0 7 chrX 157610786 157610934 -9039362 - B1_Mus1 SINE Alu -1 147 1 1 1787 21 57 0 0 chrX 157611220 157611255 -9039041 + AT_rich Low_complexity Low_complexity 1 35 0 1 1787 252 389 23 45 chrX 157611472 157611604 -9038692 - L2b LINE L2 -3 3372 3244 1 1787 22 35 0 0 chrX 157611690 157611719 -9038577 + AT_rich Low_complexity Low_complexity 1 29 0 1 1787 22 56 0 0 chrX 157611954 157611990 -9038306 + AT_rich Low_complexity Low_complexity 1 36 0 1 1787 183 182 16 98 chrX 157612706 157612767 -9037529 + L2 LINE L2 1486 1541 -1878 1 1787 226 370 89 0 chrX 157613115 157613250 -9037046 - MIRb SINE MIR -103 165 19 1 1787 388 377 32 32 chrX 157613396 157613585 -9036711 + MER63A DNA AcHobo 4 192 -18 1 1787 265 255 209 36 chrX 157613658 157613768 -9036528 - Tigger7 DNA MER2_type -27 2464 2336 1 1787 955 312 116 36 chrX 157613758 157614207 -9036089 - Tigger7 DNA MER2_type -2006 485 1 1 1787 361 167 0 0 chrX 157615016 157615082 -9035214 - Lx9 LINE L1 -7 7637 7572 1 1787 1473 57 0 20 chrX 157616577 157616774 -9033522 - L1_Mus1 LINE L1 -7 6560 6368 1 1787 4337 14 2 12 chrX 157617112 157617610 -9032686 - MT2_Mm LTR ERVL 0 493 1 1 1787 314 0 0 0 chrX 157617610 157617648 -9032648 - MERVL-int LTR ERVL 0 5485 5448 1 1787 392 167 46 35 chrX 157617648 157617735 -9032561 - ORR1A3-int LTR MaLR -1323 640 553 1 1787 40500 16 14 0 chrX 157617735 157623022 -9027274 - MERVL-int LTR ERVL -125 5360 1 1 1787 4337 14 2 12 chrX 157623022 157623520 -9026776 - MT2_Mm LTR ERVL 0 493 1 1 1787 384 299 37 9 chrX 157623926 157624034 -9026262 - PB1D10 SINE Alu 0 117 7 1 1787 344 315 11 11 chrX 157623952 157624045 -9026251 - ID_B1 SINE B4 -54 170 78 1 1787 399 315 14 80 chrX 157624079 157624217 -9026079 - RSINE1 SINE B4 0 165 37 1 1787 265 220 59 35 chrX 157624596 157624681 -9025615 - L1ME2z LINE L1 -3 6441 6355 1 1787 580 284 92 46 chrX 157625409 157625649 -9024647 - MLT1B LTR MaLR -8 382 132 1 1787 511 244 0 29 chrX 157625773 157625912 -9024384 - Lx8 LINE L1 -451 7022 6888 1 1787 1723 277 59 54 chrX 157625912 157626724 -9023572 - L1_Mur3 LINE L1 -956 5187 4421 1 1787 2942 39 88 0 chrX 157626724 157627086 -9023210 - MTA_Mm LTR MaLR -2 394 1 1 1787 8883 42 12 0 chrX 157627086 157628171 -9022125 - MTA_Mm-int LTR MaLR 0 1098 1 1 1787 3272 43 5 0 chrX 157628171 157628565 -9021731 - MTA_Mm LTR MaLR 0 396 1 1 1787 607 119 133 17 chrX 157628568 157628688 -9021608 - MTC LTR MaLR -287 134 1 1 1787 1591 290 64 148 chrX 157628688 157629784 -9020512 - L1_Mur3 LINE L1 -1723 4417 3327 1 1787 316 244 171 0 chrX 157629854 157629936 -9020360 - B1_Mus2 SINE Alu -50 97 2 1 1787 736 163 0 0 chrX 157629978 157630107 -9020189 + B1_Mus2 SINE Alu 18 146 -1 1 1787 1799 125 65 39 chrX 157630622 157630929 -9019367 - Lx3B LINE L1 0 6973 6659 1 1787 259 239 42 56 chrX 157630940 157631011 -9019285 + ID4_ SINE ID 5 74 -9 1 1787 21 36 0 0 chrX 157631074 157631102 -9019194 + AT_rich Low_complexity Low_complexity 1 28 0 1 1787 186 327 15 3 chrX 157631640 157631708 -9018588 - L2a LINE L2 -86 3340 3267 1 1787 328 369 45 0 chrX 157632263 157632420 -9017876 + Tigger5 DNA MER2_type 2 165 -2241 1 1787 27 29 0 0 chrX 157632568 157632602 -9017694 + AT_rich Low_complexity Low_complexity 1 34 0 1 1787 1396 68 34 5 chrX 157632602 157632810 -9017486 - Lx3_Mus LINE L1 -8 7001 6788 1 1787 367 224 21 157 chrX 157632817 157633008 -9017288 - L1_Mur1 LINE L1 -6704 278 114 1 1787 375 217 0 24 chrX 157633036 157633121 -9017175 - L1_Mur1 LINE L1 -6867 115 33 1 1787 26 74 0 0 chrX 157633125 157633179 -9017117 + AT_rich Low_complexity Low_complexity 1 54 0 1 1787 489 269 0 65 chrX 157633179 157633318 -9016978 + Tigger5 DNA MER2_type 2212 2341 -65 1 1787 21 0 0 0 chrX 157634496 157634517 -9015779 + AT_rich Low_complexity Low_complexity 1 21 0 1 1787 23 33 0 0 chrX 157634632 157634662 -9015634 + AT_rich Low_complexity Low_complexity 1 30 0 1 1787 3457 54 0 13 chrX 157634936 157635385 -9014911 + L1Md_F2 LINE L1 6133 6575 -7 1 1787 251 143 0 0 chrX 157635409 157635451 -9014845 + RLTR12B LTR ERVK 17 58 -470 1 1787 671 295 147 4 chrX 157637508 157637787 -9012509 - MER2 DNA MER2_type 0 345 27 1 1787 527 115 22 22 chrX 157637930 157638019 -9012277 - Lx5 LINE L1 -540 6510 6422 1 1787 1494 149 56 24 chrX 157638005 157638054 -9012242 - L1_Mur2 LINE L1 -4131 1746 1686 1 1787 522 31 0 0 chrX 157638054 157638118 -9012178 + (TTTC)n Simple_repeat Simple_repeat 3 66 0 1 1787 1494 149 56 24 chrX 157638118 157638405 -9011891 - L1_Mur2 LINE L1 -4192 1685 1400 1 1787 3455 20 2 0 chrX 157638582 157638977 -9011319 - MTA_Mm LTR MaLR 0 396 1 1 1787 250 276 112 2 chrX 157639285 157639542 -9010754 - L1M3 LINE L1 -2808 3335 3040 1 1787 32 26 0 0 chrX 157640307 157640346 -9009950 + AT_rich Low_complexity Low_complexity 1 39 0 1 1787 4904 117 7 3 chrX 157640347 157641069 -9009227 - Lx3A LINE L1 -5 6976 6252 1 1787 3895 45 56 0 chrX 157641072 157641558 -9008738 + L1_Mus1 LINE L1 6055 6567 0 1 1787 2389 134 14 27 chrX 157641559 157641972 -9008324 - Lx3A LINE L1 -737 6244 5837 1 1787 851 112 0 7 chrX 157641978 157642113 -9008183 + (TTCC)n Simple_repeat Simple_repeat 3 136 0 1 1787 1096 88 0 0 chrX 157642140 157642287 -9008009 - B1_Mm SINE Alu 0 147 1 1 1787 7325 57 22 28 chrX 157642296 157643397 -9006899 - L1_Mus2 LINE L1 0 6566 5475 1 1787 307 221 22 41 chrX 157643386 157643519 -9006777 - L1Md_F LINE L1 -5776 743 647 1 1787 493 49 0 0 chrX 157643513 157643574 -9006722 - Lx3_Mus LINE L1 -1166 5843 5783 1 1787 217 0 0 57 chrX 157643666 157643701 -9006595 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1 1787 783 210 0 21 chrX 157643728 157643869 -9006427 + B1_Mur3 SINE Alu 7 144 -5 1 1787 1387 342 49 30 chrX 157644003 157644769 -9005527 - Lx7 LINE L1 -289 7184 6394 1 1787 2190 183 6 81 chrX 157644790 157644881 -9005415 - RLTR12B LTR ERVK -8 520 463 1 1787 1194 48 7 0 chrX 157644881 157645027 -9005269 - B1_Mm SINE Alu 0 147 1 1 1787 2190 183 6 81 chrX 157645027 157645405 -9004891 - RLTR12B LTR ERVK -66 462 86 1 1787 344 68 0 33 chrX 157645426 157645487 -9004809 + (TCTCTG)n Simple_repeat Simple_repeat 6 64 0 1 1787 363 342 61 25 chrX 157646006 157646204 -9004092 - B3 SINE B2 -11 205 1 1 1787 22 0 0 0 chrX 157647096 157647118 -9003178 + AT_rich Low_complexity Low_complexity 1 22 0 2 1787 2092 309 84 38 chrX 157647915 157649028 -9001268 - Lx7 LINE L1 -442 7254 6090 2 1787 514 278 22 33 chrX 157649511 157649693 -9000603 - B3A SINE B2 -17 181 2 2 1787 1365 319 124 31 chrX 157651724 157652504 -8997792 - Lx7 LINE L1 -388 7308 6456 2 1787 22 0 0 0 chrX 157652807 157652829 -8997467 + AT_rich Low_complexity Low_complexity 1 22 0 2 1787 1010 85 42 7 chrX 157653602 157653744 -8996552 + B1_Mus1 SINE Alu 1 147 -1 2 1787 825 324 87 37 chrX 157653764 157654222 -8996074 - Lx7 LINE L1 -390 7306 6826 2 1787 1712 165 190 6 chrX 157654276 157654624 -8995672 - MTC LTR MaLR -9 412 1 2 1787 1562 116 87 4 chrX 157654718 157654994 -8995302 - L1_Mus4 LINE L1 -1 6635 6337 2 1787 289 286 86 35 chrX 157655413 157655544 -8994752 + MER58C DNA MER1_type 127 335 -6 2 1787 380 227 139 10 chrX 157657361 157657570 -8992726 - Lx9 LINE L1 -1 7643 7408 2 1787 7622 66 2 3 chrX 157657581 157658831 -8991465 - L1Md_F2 LINE L1 -19 6563 5316 2 1787 1379 284 49 28 chrX 157658872 157659402 -8990894 - Lx9 LINE L1 -291 7353 6813 2 1787 22 0 0 0 chrX 157659997 157660019 -8990277 + AT_rich Low_complexity Low_complexity 1 22 0 2 1787 1837 252 78 40 chrX 157660159 157660239 -8990057 - Lx9 LINE L1 -127 7517 7419 2 1787 276 77 0 0 chrX 157660239 157660278 -8990018 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1787 1837 252 78 40 chrX 157660278 157660899 -8989397 - Lx9 LINE L1 -226 7418 6789 2 1787 1398 272 91 44 chrX 157661406 157661548 -8988748 - Lx9 LINE L1 -46 7598 7440 2 1787 315 71 0 0 chrX 157661548 157661590 -8988706 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1787 1398 272 91 44 chrX 157661590 157662198 -8988098 - Lx9 LINE L1 -205 7439 6813 2 1787 1968 261 47 65 chrX 157662690 157662925 -8987371 - Lx9 LINE L1 -15 7629 7412 2 1787 465 110 0 0 chrX 157662925 157662998 -8987298 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 1787 1968 261 47 65 chrX 157662998 157663619 -8986677 - Lx9 LINE L1 -233 7411 6789 2 1787 186 43 0 0 chrX 157664203 157664226 -8986070 + (T)n Simple_repeat Simple_repeat 1 23 0 2 1787 1837 252 78 40 chrX 157664371 157664451 -8985845 - Lx9 LINE L1 -127 7517 7419 2 1787 312 70 0 0 chrX 157664451 157664494 -8985802 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1787 1837 252 78 40 chrX 157664494 157665115 -8985181 - Lx9 LINE L1 -226 7418 6789 2 1787 1398 272 91 44 chrX 157665622 157665764 -8984532 - Lx9 LINE L1 -46 7598 7440 2 1787 315 71 0 0 chrX 157665764 157665806 -8984490 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1787 1398 272 91 44 chrX 157665806 157666414 -8983882 - Lx9 LINE L1 -205 7439 6813 2 1787 1944 261 48 64 chrX 157666906 157667139 -8983157 - Lx9 LINE L1 -15 7629 7412 2 1787 465 110 0 0 chrX 157667139 157667212 -8983084 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 1787 1702 269 43 60 chrX 157667212 157667833 -8982463 - Lx9 LINE L1 -233 7411 6789 2 1787 360 0 0 0 chrX 157668482 157668522 -8981774 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1787 1284 267 68 34 chrX 157668583 157669138 -8981158 - Lx9 LINE L1 -258 7386 6813 2 1787 229 274 89 0 chrX 157669619 157669798 -8980498 - Lx9 LINE L1 -8 7636 7442 2 1787 180 111 0 0 chrX 157669816 157669843 -8980453 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1787 906 55 8 8 chrX 157669931 157670059 -8980237 - L1Md_F2 LINE L1 -12 6570 6443 2 1787 764 99 15 44 chrX 157670059 157670196 -8980100 - L1Md_F2 LINE L1 -591 5991 5859 2 1787 1772 88 18 12 chrX 157670187 157670485 -8979811 - L1VL1 LINE L1 -5816 1166 853 2 1787 1332 279 40 13 chrX 157670571 157671094 -8979202 - Lx9 LINE L1 -396 7248 6712 2 1787 2036 265 75 23 chrX 157671529 157672412 -8977884 - Lx9 LINE L1 -7 7637 6709 2 1787 1158 320 65 46 chrX 157673067 157673892 -8976404 - Lx7 LINE L1 -396 7300 6460 2 1787 2025 220 54 42 chrX 157673965 157674577 -8975719 - Lx7 LINE L1 -1819 5654 5033 2 1787 1200 162 26 21 chrX 157674565 157674798 -8975498 - Lx4B LINE L1 -583 6475 6242 2 1787 226 252 159 61 chrX 157674906 157674939 -8975357 - L1_Mur3 LINE L1 -413 3501 3477 2 1787 1141 75 0 7 chrX 157674939 157675086 -8975210 - B1_Mus2 SINE Alu 0 147 2 2 1787 494 219 187 22 chrX 157675086 157675297 -8974999 - L1_Mur3 LINE L1 -438 3476 3233 2 1787 432 265 189 13 chrX 157675833 157675986 -8974310 - MTC LTR MaLR 0 421 242 2 1787 241 280 77 32 chrX 157676414 157676635 -8973661 + L1MEf LINE L1 1985 2215 -3985 2 1787 1239 48 0 0 chrX 157676766 157676913 -8973383 + B1_Mus2 SINE Alu 1 147 0 2 1787 3318 64 16 0 chrX 157677103 157677527 -8972769 - L1_Mus1 LINE L1 0 6567 6137 2 1787 517 80 0 0 chrX 157677527 157677602 -8972694 + L1_Mus1 LINE L1 6060 6134 -433 2 1787 21 0 0 0 chrX 157678160 157678181 -8972115 + AT_rich Low_complexity Low_complexity 1 21 0 2 1787 715 258 46 26 chrX 157678191 157678386 -8971910 - B3 SINE B2 -17 199 1 2 1787 23 33 0 0 chrX 157678488 157678518 -8971778 + AT_rich Low_complexity Low_complexity 1 30 0 2 1787 687 236 6 33 chrX 157679323 157679503 -8970793 - Lx5 LINE L1 -47 7003 6829 2 1788 3112 188 95 11 chrX 157680155 157680821 -8969475 - Lx5 LINE L1 -3 7047 6326 2 1788 274 274 54 14 chrX 157680929 157681003 -8969293 + ID4_ SINE ID 3 79 -4 2 1788 378 0 0 0 chrX 157681502 157681544 -8968752 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 1788 584 316 0 26 chrX 157681593 157681749 -8968547 - RSINE1 SINE B4 0 165 14 2 1788 246 324 9 38 chrX 157682763 157682869 -8967427 + MIRc SINE MIR 32 134 -134 2 1788 3738 73 8 0 chrX 157683049 157683539 -8966757 + L1_Mus1 LINE L1 6074 6567 0 2 1788 492 100 0 0 chrX 157683590 157683670 -8966626 + (TC)n Simple_repeat Simple_repeat 1 80 0 2 1788 372 94 0 0 chrX 157683789 157683842 -8966454 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1788 551 333 39 0 chrX 157683845 157683998 -8966298 - B3A SINE B2 -38 160 2 2 1788 3784 277 85 28 chrX 157684838 157687734 -8962562 - Lx8 LINE L1 -6 7467 4380 2 1788 249 33 0 0 chrX 157687735 157687765 -8962531 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2 1788 457 305 0 0 chrX 157687771 157687876 -8962420 - B1_Mur1 SINE Alu -21 128 24 2 1788 244 403 57 19 chrX 157687784 157687941 -8962355 - B4 SINE B4 -88 204 42 2 1788 1522 224 71 3 chrX 157687912 157688248 -8962048 + ORR1D1 LTR MaLR 16 374 0 2 1788 6517 173 55 46 chrX 157688248 157689606 -8960690 + ORR1D1-int LTR MaLR 1 1370 0 2 1788 1768 171 24 71 chrX 157689606 157689791 -8960505 + ORR1D1 LTR MaLR 15 183 -191 2 1788 198 0 0 0 chrX 157689791 157689813 -8960483 + (CCTG)n Simple_repeat Simple_repeat 2 23 0 2 1788 1768 171 24 71 chrX 157689813 157690005 -8960291 + ORR1D1 LTR MaLR 184 374 0 2 1788 201 321 146 26 chrX 157691259 157691451 -8958845 - MIRb SINE MIR -17 251 37 2 1788 917 285 21 34 chrX 157693725 157694016 -8956280 - B4 SINE B4 -4 288 2 2 1788 203 61 0 29 chrX 157694380 157694414 -8955882 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 1788 279 0 0 0 chrX 157696424 157696455 -8953841 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1788 1151 55 7 0 chrX 157696540 157696686 -8953610 + B1_Mus2 SINE Alu 1 147 0 2 1788 180 0 0 0 chrX 157696686 157696706 -8953590 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1788 248 314 82 41 chrX 157696788 157696861 -8953435 - PB1D10 SINE Alu -25 92 17 2 1788 24 32 0 0 chrX 157696894 157696925 -8953371 + AT_rich Low_complexity Low_complexity 1 31 0 2 1788 346 279 210 9 chrX 157697107 157697436 -8952860 + L1MB4 LINE L1 5755 6149 -31 2 1788 426 260 167 39 chrX 157699639 157699795 -8950501 - ORR1E LTR MaLR -182 177 2 2 1788 340 273 30 30 chrX 157700498 157700664 -8949632 - L1MA4 LINE L1 -377 5923 5758 2 1788 8026 110 4 2 chrX 157700734 157702008 -8948288 - L1Md_F LINE L1 -1694 4189 2914 2 1788 15975 47 6 1 chrX 157702004 157704786 -8945510 - L1Md_F2 LINE L1 -11 6571 3774 2 1788 1850 125 89 0 chrX 157704784 157705111 -8945185 - L1Md_F LINE L1 -5677 939 584 2 1788 249 305 92 0 chrX 157705401 157705532 -8944764 + L1MA9 LINE L1 5825 5967 -345 2 1788 895 74 126 0 chrX 157705573 157705708 -8944588 - L1_Mus4 LINE L1 -378 6258 6107 2 1788 2430 237 42 47 chrX 157705918 157706640 -8943656 + RMER1C Other Other 623 1340 -2 2 1788 1161 70 0 0 chrX 157706713 157706856 -8943440 + B1_Mus1 SINE Alu 1 143 -5 2 1788 715 69 10 10 chrX 157706900 157707002 -8943294 + B1_Mur4 SINE Alu 43 144 -6 2 1788 7789 143 17 1 chrX 157707600 157708940 -8941356 - L1_Mm LINE L1 -174 5709 4349 2 1788 210 91 0 0 chrX 157710067 157710100 -8940196 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 2 1788 225 161 18 18 chrX 157710896 157710953 -8939343 + RLTR14 LTR ERV1 192 248 -134 2 1788 16040 146 43 15 chrX 157710953 157714784 -8935512 - Lx2B LINE L1 -15 6985 3057 2 1788 207 0 0 0 chrX 157714784 157714807 -8935489 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1788 16040 140 32 13 chrX 157714807 157714982 -8935314 - Lx2B LINE L1 -2830 3056 2858 2 1788 753 218 0 34 chrX 157714982 157715013 -8935283 + RLTR14 LTR ERV1 238 268 -114 2 1788 2457 75 32 6 chrX 157715013 157715361 -8934935 + L1_Mus3 LINE L1 6281 6637 -1 2 1788 753 218 0 34 chrX 157715361 157715476 -8934820 + RLTR14 LTR ERV1 269 379 -3 2 1788 821 249 45 65 chrX 157715488 157715733 -8934563 + RLTR14-int LTR ERV1 25 264 -5053 2 1788 751 143 0 0 chrX 157715840 157715952 -8934344 + MTB_Mm LTR MaLR 1 112 -295 2 1788 3228 190 85 10 chrX 157715953 157716113 -8934183 + Lx5 LINE L1 6273 6435 -615 2 1788 2709 39 5 123 chrX 157716113 157716527 -8933769 - RLTR10B2 LTR ERVK 0 365 1 2 1788 3228 190 85 10 chrX 157716527 157717087 -8933209 + Lx5 LINE L1 6436 7046 -4 2 1788 452 157 9 15 chrX 157717106 157717201 -8933095 + MTB_Mm LTR MaLR 283 411 -8 2 1788 2499 234 82 73 chrX 157717208 157718115 -8932181 + RLTR14-int LTR ERV1 374 1288 -4029 2 1788 604 203 101 0 chrX 157718210 157718348 -8931948 + RLTR14-int LTR ERV1 1298 1449 -3868 2 1788 740 240 0 11 chrX 157718347 157718524 -8931772 + RLTR14-int LTR ERV1 1860 2034 -3283 2 1788 900 67 17 0 chrX 157718525 157718644 -8931652 - B2_Mm2 SINE B2 -74 121 1 2 1788 2327 36 0 7 chrX 157718673 157718951 -8931345 - L1Md_F2 LINE L1 -14 6568 6293 2 1788 1220 105 33 0 chrX 157718956 157719137 -8931159 - B2_Mm1t SINE B2 -6 187 1 2 1788 1641 187 66 22 chrX 157719165 157719586 -8930710 + L1_Mur2 LINE L1 375 794 -6292 2 1788 2539 102 31 34 chrX 157719586 157720002 -8930294 + RLTR9F LTR ERVK 1 415 0 2 1788 3035 189 60 18 chrX 157720002 157721767 -8928529 + L1_Mur2 LINE L1 379 1495 -4382 2 1788 7778 51 23 2 chrX 157721767 157722762 -8927534 + RLTR13D2 LTR ERVK 1 1016 -7 2 1788 6731 128 50 1 chrX 157722762 157723831 -8926465 + Lx4A LINE L1 5908 7029 -29 2 1788 1167 153 154 66 chrX 157723900 157724173 -8926123 + RLTR14-int LTR ERV1 2033 2329 -2988 2 1788 1713 71 4 26 chrX 157724174 157724259 -8926037 - MTB_Mm LTR MaLR 0 407 327 2 1788 3244 42 42 5 chrX 157724259 157724641 -8925655 + MTA_Mm LTR MaLR 1 396 0 2 1788 1713 71 4 26 chrX 157724641 157724787 -8925509 - MTB_Mm LTR MaLR -81 326 181 2 1788 702 239 0 0 chrX 157724792 157724968 -8925328 + CT-rich Low_complexity Low_complexity 2 177 0 2 1788 624 163 0 0 chrX 157724947 157725119 -8925177 + T-rich Low_complexity Low_complexity 9 180 0 2 1788 243 0 0 0 chrX 157725121 157725148 -8925148 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1788 358 87 0 0 chrX 157725160 157725206 -8925090 - PB1D9 SINE Alu -73 47 2 3 1788 1610 70 22 3 chrX 157725206 157725403 -8924893 - MTB LTR MaLR -214 207 1 3 1788 10099 161 45 35 chrX 157725403 157727291 -8923005 + RLTR14-int LTR ERV1 2326 4232 -1085 2 1788 414 0 0 0 chrX 157727291 157727337 -8922959 + (TC)n Simple_repeat Simple_repeat 2 47 0 3 1788 297 0 0 0 chrX 157727337 157727369 -8922927 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1788 2204 126 36 30 chrX 157727590 157728007 -8922289 + RLTR14-int LTR ERV1 4842 5306 -11 2 1788 1344 121 88 0 chrX 157728029 157728244 -8922052 + RLTR14 LTR ERV1 3 236 -146 2 1788 231 295 80 65 chrX 157728393 157728531 -8921765 - B4 SINE B4 -152 140 1 3 1788 294 221 56 153 chrX 157729111 157729255 -8921041 - RLTR14 LTR ERV1 -44 338 209 3 1788 21 0 0 0 chrX 157729429 157729450 -8920846 + AT_rich Low_complexity Low_complexity 1 21 0 3 1788 325 223 32 0 chrX 157730227 157730321 -8919975 - LTR41 LTR ERVL -4 764 668 3 1788 21 71 0 0 chrX 157730472 157730514 -8919782 + AT_rich Low_complexity Low_complexity 1 42 0 3 1788 960 246 39 92 chrX 157730538 157730798 -8919498 + B4A SINE B4 31 276 -16 3 1788 391 43 0 0 chrX 157730802 157730849 -8919447 - ORR1A3 LTR MaLR -8 318 272 3 1788 7405 114 35 5 chrX 157730874 157732403 -8917893 - Lx LINE L1 -7 6647 5070 3 1788 1728 129 3 65 chrX 157732403 157732710 -8917586 - ORR1A3 LTR MaLR -38 288 1 3 1788 338 240 112 28 chrX 157732793 157732900 -8917396 + PB1D10 SINE Alu 1 116 -1 3 1788 663 276 21 52 chrX 157733198 157733389 -8916907 + B3A SINE B2 7 191 -7 3 1788 362 347 67 45 chrX 157733530 157733817 -8916479 - LTR41 LTR ERVL -296 472 76 3 1788 360 253 24 0 chrX 157734008 157734091 -8916205 - PB1D10 SINE Alu -10 107 23 3 1788 229 254 45 0 chrX 157734455 157734522 -8915774 + B1F2 SINE Alu 9 78 -71 3 1788 369 301 11 21 chrX 157734753 157734848 -8915448 + PB1 SINE Alu 33 126 -1 3 1788 948 168 0 0 chrX 157734949 157735122 -8915174 + CT-rich Low_complexity Low_complexity 2 174 0 3 1788 786 130 67 30 chrX 157735132 157735267 -8915029 - B1_Mur4 SINE Alu 0 150 11 3 1788 180 319 13 53 chrX 157735276 157735352 -8914944 + MIRb SINE MIR 123 195 -73 3 1788 333 0 0 0 chrX 157735653 157735690 -8914606 + (T)n Simple_repeat Simple_repeat 1 37 0 3 1788 273 119 0 0 chrX 157737046 157737088 -8913208 + (T)n Simple_repeat Simple_repeat 1 42 0 3 1788 342 194 0 0 chrX 157737569 157737641 -8912655 + (TG)n Simple_repeat Simple_repeat 1 72 0 3 1788 471 170 250 0 chrX 157737641 157737741 -8912555 - B1_Mur1 SINE Alu -8 141 17 3 1788 22 0 0 0 chrX 157738033 157738055 -8912241 + AT_rich Low_complexity Low_complexity 1 22 0 3 1788 336 291 11 23 chrX 157738090 157738178 -8912118 - B1_Mus1 SINE Alu -60 88 2 3 1788 22 0 0 0 chrX 157738303 157738325 -8911971 + AT_rich Low_complexity Low_complexity 1 22 0 3 1788 613 281 14 14 chrX 157738538 157738679 -8911617 + B1_Mur2 SINE Alu 3 143 -6 3 1788 917 228 130 0 chrX 157739074 157739258 -8911038 + B3 SINE B2 2 209 -7 3 1788 619 236 63 0 chrX 157739508 157739682 -8910614 + L1MC LINE L1 4211 4395 -1751 3 1788 449 125 14 0 chrX 157739714 157739786 -8910510 - PB1D9 SINE Alu -5 115 43 3 1788 591 276 86 25 chrX 157739816 157740122 -8910174 - L1M3 LINE L1 -2084 4062 3748 3 1788 594 0 0 0 chrX 157740681 157740747 -8909549 + (TTCC)n Simple_repeat Simple_repeat 4 69 0 3 1788 345 93 0 0 chrX 157740747 157740801 -8909495 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 1788 817 276 40 13 chrX 157740816 157741040 -8909256 - Lx9 LINE L1 -655 6989 6760 3 1788 1911 229 57 37 chrX 157741037 157741247 -8909049 - L1_Rod LINE L1 -207 5640 5428 3 1788 1195 68 7 0 chrX 157741247 157741394 -8908902 - B1_Mus1 SINE Alu 0 148 1 3 1788 1911 229 57 37 chrX 157741394 157741724 -8908572 - L1_Rod LINE L1 -420 5427 5089 3 1788 1584 252 84 28 chrX 157741726 157742306 -8907990 + L1_Rod LINE L1 4119 4731 -1116 3 1788 551 240 60 0 chrX 157742307 157742407 -8907889 - B1_Mur1 SINE Alu -31 118 13 3 1788 183 184 0 0 chrX 157742689 157742727 -8907569 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 1788 26 0 0 0 chrX 157743481 157743507 -8906789 + AT_rich Low_complexity Low_complexity 1 26 0 3 1788 472 295 9 0 chrX 157743649 157743754 -8906542 - B3 SINE B2 -7 209 104 3 1788 257 100 225 0 chrX 157743888 157743968 -8906328 - Lx5 LINE L1 -2 7048 6951 3 1788 1655 192 10 3 chrX 157743968 157744266 -8906030 + Lx5 LINE L1 6460 6759 -291 3 1788 921 87 0 30 chrX 157744268 157744399 -8905897 - B1_Mus1 SINE Alu -21 127 1 3 1788 243 259 72 61 chrX 157744399 157744469 -8905827 - ORR1B1-int LTR MaLR -867 642 571 3 1788 237 254 42 0 chrX 157744510 157744581 -8905715 - PB1D10 SINE Alu 0 117 44 3 1788 308 244 64 0 chrX 157744646 157744724 -8905572 - PB1D7 SINE Alu -32 88 6 3 1788 255 203 0 0 chrX 157745253 157745312 -8904984 + GA-rich Low_complexity Low_complexity 2 60 0 3 1788 186 192 0 0 chrX 157745639 157745691 -8904605 + (ATG)n Simple_repeat Simple_repeat 3 54 0 3 1788 1021 149 83 0 chrX 157745904 157746072 -8904224 + MERVL_2A-int LTR ERVL 5212 5393 -368 3 1788 4765 216 42 12 chrX 157747337 157748325 -8901971 - RodERV21-int LTR ERV1 -2273 2718 1701 3 1788 246 174 0 0 chrX 157748345 157748391 -8901905 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1788 1021 188 25 34 chrX 157748438 157748642 -8901654 - RodERV21-int LTR ERV1 -3337 1654 1453 3 1788 375 23 0 0 chrX 157748719 157748763 -8901533 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1788 369 0 0 0 chrX 157748840 157748881 -8901415 + (TAG)n Simple_repeat Simple_repeat 2 42 0 3 1788 469 202 0 0 chrX 157749086 157749180 -8901116 - RodERV21-int LTR ERV1 -3535 1456 1363 3 1788 355 264 105 88 chrX 157749360 157749655 -8900641 - RLTR42-int LTR ERVK -3737 1785 1486 3 1788 817 226 36 31 chrX 157749645 157749942 -8900354 - RLTR42-int LTR ERVK -4194 1328 1162 3 1788 218 105 26 0 chrX 157749958 157749996 -8900300 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 3 1788 8597 87 14 11 chrX 157749996 157751139 -8899157 - Lx3A LINE L1 -2 6979 5833 3 1788 694 120 16 0 chrX 157751139 157751263 -8899033 + Lx3_Mus LINE L1 5738 5866 -1134 3 1788 2368 214 118 56 chrX 157751548 157752104 -8898192 - RodERV21-int LTR ERV1 -3995 996 409 3 1788 468 0 0 0 chrX 157752104 157752156 -8898140 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1788 2368 228 277 46 chrX 157752156 157752485 -8897811 - RodERV21-int LTR ERV1 -4583 408 1 3 1788 292 262 217 50 chrX 157752526 157752818 -8897478 - RMER21B LTR ERV1 -263 684 340 3 1788 1708 148 83 47 chrX 157752835 157753196 -8897100 + MERVL_2A-int LTR ERVL 5388 5761 0 3 1788 967 275 85 56 chrX 157753196 157753643 -8896653 + MT2A LTR ERVL 1 460 -73 3 1788 1689 226 37 54 chrX 157753696 157754178 -8896118 - RLTR28B LTR ERVL 0 481 8 3 1788 1184 66 0 0 chrX 157755238 157755375 -8894921 + B1_Mus2 SINE Alu 1 137 -10 3 1788 8263 50 2 0 chrX 157755647 157757336 -8892960 - L1Md_F2 LINE L1 -4 6578 4888 3 1788 381 167 11 56 chrX 157757336 157757425 -8892871 + B1F1 SINE Alu 2 86 -63 3 1788 5616 88 11 7 chrX 157757525 157758259 -8892037 - Lx3_Mus LINE L1 0 7009 6273 3 1788 353 293 0 0 chrX 157758260 157758342 -8891954 + PB1D10 SINE Alu 36 117 0 3 1788 1444 169 0 9 chrX 157758625 157758852 -8891444 + URR1B DNA MER1_type 1 225 0 3 1788 436 266 92 0 chrX 157758955 157759064 -8891232 + PB1 SINE Alu 7 125 -2 3 1788 23 0 0 0 chrX 157759450 157759473 -8890823 + AT_rich Low_complexity Low_complexity 1 23 0 3 1788 418 269 8 35 chrX 157760212 157760367 -8889929 - MIRm SINE MIR -81 187 36 3 1788 240 288 41 25 chrX 157760394 157760515 -8889781 - MER5A DNA MER1_type -6 183 61 3 1788 860 269 5 9 chrX 157760823 157761033 -8889263 - B3 SINE B2 -6 210 2 3 1788 25 75 0 0 chrX 157761499 157761552 -8888744 + AT_rich Low_complexity Low_complexity 1 53 0 3 1788 477 301 37 0 chrX 157761618 157761754 -8888542 - B3A SINE B2 -22 176 36 3 1788 251 286 101 37 chrX 157761957 157762066 -8888230 + PB1D10 SINE Alu 1 116 -1 3 1788 244 278 165 9 chrX 157762578 157762687 -8887609 - L1MD2 LINE L1 -2 6240 6115 3 1788 1270 48 7 0 chrX 157762791 157762937 -8887359 - B1_Mus2 SINE Alu 0 147 1 3 1788 339 279 91 49 chrX 157762996 157763234 -8887062 - L1MD2 LINE L1 -445 5899 5662 3 1788 616 152 15 289 chrX 157763398 157763602 -8886694 - B1_Mur3 SINE Alu -1 148 1 3 1788 24 0 0 0 chrX 157763614 157763638 -8886658 + AT_rich Low_complexity Low_complexity 1 24 0 3 1788 287 250 0 70 chrX 157763640 157763662 -8886634 - L1MA10 LINE L1 -11 6323 6307 3 1788 698 255 160 54 chrX 157763662 157764031 -8886265 - MLT1A1 LTR MaLR 0 408 1 3 1788 287 250 0 70 chrX 157764031 157764094 -8886202 - L1MA10 LINE L1 -28 6306 6244 3 1788 476 216 66 24 chrX 157764181 157764347 -8885949 - L1MDa LINE L1 -4550 2083 1911 3 1788 1025 246 97 11 chrX 157764582 157764861 -8885435 - Lx8 LINE L1 -2 7471 7169 3 1788 1858 226 76 4 chrX 157764869 157765345 -8884951 - Lx9 LINE L1 -1 7643 7134 3 1788 473 255 42 21 chrX 157765407 157765599 -8884697 - L1MD2 LINE L1 0 6750 6555 3 1788 260 292 14 0 chrX 157765639 157765711 -8884585 - ID2 SINE ID 0 83 11 3 1788 838 256 6 16 chrX 157765770 157765953 -8884343 - B3A SINE B2 -16 182 2 3 1788 414 274 132 0 chrX 157765962 157766074 -8884222 - B1_Mur1 SINE Alu -21 128 2 3 1788 269 282 73 57 chrX 157766074 157766103 -8884193 - MT2B LTR ERVL -433 168 138 3 1788 3121 164 80 45 chrX 157766127 157766746 -8883550 - RMER19B LTR ERVK -1 901 270 3 1788 1434 241 27 6 chrX 157766746 157767084 -8883212 - L1_Mur3 LINE L1 -41 5839 5495 3 1788 1374 166 19 29 chrX 157767085 157767363 -8882933 - RMER19B LTR ERVK -5 897 359 3 1788 2766 197 101 55 chrX 157767369 157768051 -8882245 - RMER19B LTR ERVK -238 664 1 3 1788 1010 223 58 11 chrX 157768066 157768343 -8881953 - L1_Mur3 LINE L1 -392 5488 5199 3 1788 587 322 145 18 chrX 157768739 157769340 -8880956 - L1MD2 LINE L1 -207 6543 5867 3 1788 432 0 0 0 chrX 157769382 157769430 -8880866 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 3 1788 1026 78 8 0 chrX 157769430 157769558 -8880738 - B1_Mus1 SINE Alu -19 129 1 3 1788 345 301 30 8 chrX 157769560 157769694 -8880602 - L1MD2 LINE L1 -4594 2039 1903 3 1788 1248 301 86 26 chrX 157769956 157770758 -8879538 - L1MD2 LINE L1 -2 6357 5508 3 1788 281 321 53 14 chrX 157770795 157771007 -8879289 - L1MD2 LINE L1 -4567 2066 1839 3 1788 238 182 30 0 chrX 157771192 157771258 -8879038 + (TATG)n Simple_repeat Simple_repeat 4 71 0 3 1788 285 100 0 0 chrX 157771606 157771656 -8878640 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1788 544 296 0 0 chrX 157771691 157771826 -8878470 - B3 SINE B2 0 216 82 4 1788 219 36 0 0 chrX 157771851 157771879 -8878417 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 4 1788 364 282 0 0 chrX 157771886 157771957 -8878339 - B3 SINE B2 -34 182 112 4 1788 693 258 32 18 chrX 157772058 157772279 -8878017 - L1MDa LINE L1 -660 6090 5867 4 1788 514 293 13 17 chrX 157772272 157772505 -8877791 - L1MDa LINE L1 -4555 2078 1847 4 1788 317 257 206 36 chrX 157772809 157773003 -8877293 - L1MD1 LINE L1 -357 5885 5659 4 1788 5121 188 52 12 chrX 157773117 157774137 -8876159 - Lx2B LINE L1 -1 6999 5939 4 1788 7249 144 33 9 chrX 157774150 157774665 -8875631 - L1VL4 LINE L1 -1332 2227 1693 4 1788 360 0 0 0 chrX 157774665 157774705 -8875591 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1788 7249 153 99 6 chrX 157774705 157775775 -8874521 - L1VL4 LINE L1 -1867 1692 510 4 1788 296 211 91 40 chrX 157776187 157776286 -8874010 - L1MD1 LINE L1 -752 5607 5504 4 1788 651 254 7 40 chrX 157776325 157776473 -8873823 - B1F SINE Alu -6 143 1 4 1788 507 17 0 0 chrX 157776669 157776729 -8873567 + (TCCC)n Simple_repeat Simple_repeat 4 63 0 4 1788 435 38 0 0 chrX 157776729 157776781 -8873515 + (TTTC)n Simple_repeat Simple_repeat 3 55 0 4 1788 721 191 22 30 chrX 157776784 157776919 -8873377 - B1_Mus2 SINE Alu -8 139 6 4 1788 421 237 93 116 chrX 157777170 157777299 -8872997 + RSINE1 SINE B4 8 133 -32 4 1788 344 281 63 28 chrX 157777585 157777728 -8872568 - L1MD2 LINE L1 -60 6299 6152 4 1788 332 328 0 65 chrX 157777963 157778087 -8872209 - L1MD2 LINE L1 -179 6063 5948 4 1788 633 312 6 0 chrX 157778124 157778294 -8872002 + RMER30 DNA MER1_type 5 175 -27 4 1788 461 250 52 7 chrX 157778377 157778530 -8871766 - L1MD2 LINE L1 -687 5672 5513 4 1788 235 304 88 0 chrX 157778619 157778721 -8871575 - L1MEf LINE L1 -4640 1560 1450 4 1788 253 298 146 82 chrX 157779016 157779455 -8870841 - L1MD2 LINE L1 -106 6253 5787 4 1788 666 287 135 71 chrX 157779575 157779841 -8870455 + B4A SINE B4 10 292 0 4 1788 332 297 22 0 chrX 157779894 157780032 -8870264 - L1MD2 LINE L1 -647 5712 5572 4 1788 313 208 56 19 chrX 157780034 157780142 -8870154 - L1MDa LINE L1 -4609 2024 1913 4 1788 1342 215 147 98 chrX 157780514 157781045 -8869251 - RMER4B LTR ERVK -12 573 17 4 1788 242 319 29 0 chrX 157781315 157781384 -8868912 - Cheshire DNA MER1_type -2156 264 194 4 1788 1297 106 16 0 chrX 157781546 157781735 -8868561 + B2_Mm2 SINE B2 1 192 -3 4 1788 455 285 84 8 chrX 157781865 157781996 -8868300 + B1F SINE Alu 1 141 -8 4 1788 249 387 25 49 chrX 157782107 157782270 -8868026 + MIR SINE MIR 1 159 -103 4 1788 183 42 0 0 chrX 157782529 157782553 -8867743 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 1788 1019 292 45 30 chrX 157782553 157782818 -8867478 - B4A SINE B4 -23 269 1 4 1788 200 269 197 14 chrX 157782857 157783004 -8867292 + MIR SINE MIR 86 259 -3 4 1788 31306 73 3 6 chrX 157783525 157785219 -8865077 - L1_Mus1 LINE L1 -4 6563 4877 4 1788 8698 14 0 0 chrX 157785219 157786197 -8864099 + L1Md_A LINE L1 5605 6582 0 4 1788 31306 95 15 11 chrX 157786197 157790700 -8859596 - L1_Mus1 LINE L1 -1007 4876 355 4 1788 806 276 87 26 chrX 157790705 157791014 -8859282 - Lx8 LINE L1 -135 7338 7011 4 1788 579 263 39 0 chrX 157791025 157791181 -8859115 - Lx8 LINE L1 -596 7048 6779 4 1788 191 36 36 0 chrX 157791181 157791209 -8859087 + (TAG)n Simple_repeat Simple_repeat 1 29 0 4 1788 969 291 68 8 chrX 157791209 157791564 -8858732 - Lx8 LINE L1 -750 6894 6371 4 1788 206 119 48 0 chrX 157792103 157792145 -8858151 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 4 1788 459 87 0 0 chrX 157793400 157793469 -8856827 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 1788 814 322 62 15 chrX 157793474 157793733 -8856563 - B4A SINE B4 -20 272 2 4 1788 328 308 149 34 chrX 157794269 157794417 -8855879 + MER5A1 DNA MER1_type 1 165 -1 4 1788 274 337 33 11 chrX 157794511 157794601 -8855695 - PB1 SINE Alu -34 93 2 4 1788 360 0 0 0 chrX 157794712 157794752 -8855544 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 1788 3855 89 2 0 chrX 157794876 157795393 -8854903 - L1Md_F2 LINE L1 -3 6579 6062 4 1788 1428 44 0 0 chrX 157795393 157795574 -8854722 + L1Md_F2 LINE L1 5729 5909 -673 4 1788 342 0 0 0 chrX 157796727 157796765 -8853531 + (CAA)n Simple_repeat Simple_repeat 2 39 0 4 1788 25 75 0 0 chrX 157797691 157797744 -8852552 + AT_rich Low_complexity Low_complexity 1 53 0 4 1788 1107 69 14 7 chrX 157797961 157798107 -8852189 + B1_Mus2 SINE Alu 1 147 0 4 1788 248 112 37 24 chrX 157798135 157798217 -8852079 + A-rich Low_complexity Low_complexity 3 85 0 4 1788 201 154 0 0 chrX 157799222 157799261 -8851035 + T-rich Low_complexity Low_complexity 1 39 0 4 1788 1969 130 22 9 chrX 157799299 157799618 -8850678 - ORR1A4 LTR MaLR -6 323 1 4 1788 742 308 63 19 chrX 157799899 157800167 -8850129 + B4 SINE B4 1 280 -12 4 1788 1216 48 0 0 chrX 157800950 157801095 -8849201 + B1_Mus1 SINE Alu 2 146 -2 4 1788 596 174 487 7 chrX 157802352 157802502 -8847794 + URR1A DNA MER1_type 1 222 -4 4 1788 242 290 97 0 chrX 157803095 157803157 -8847139 + ID4_ SINE ID 16 83 0 4 1788 411 256 55 20 chrX 157803656 157803793 -8846503 + MER3 DNA MER1_type 2 102 -107 4 1788 3530 100 35 17 chrX 157804249 157804789 -8845507 - Lx4A LINE L1 -72 6986 6437 4 1788 279 210 136 0 chrX 157805107 157805188 -8845108 - MamGypLTR1c LTR Gypsy -9 794 703 4 1788 1562 77 41 0 chrX 157805303 157805524 -8844772 - L1_Mus1 LINE L1 -325 6242 6013 4 1788 987 113 0 0 chrX 157805525 157805676 -8844620 + L1_Mm LINE L1 4685 4835 -1048 4 1788 1071 266 93 23 chrX 157806621 157807009 -8843287 - LTR37A LTR ERV1 -9 417 3 4 1788 864 229 5 54 chrX 157807078 157807263 -8843033 + B3 SINE B2 1 176 -40 4 1788 1152 249 102 45 chrX 157807271 157807335 -8842961 + Lx7 LINE L1 6860 6910 -786 4 1788 1217 52 81 0 chrX 157807335 157807507 -8842789 - B2_Mm2 SINE B2 -8 187 2 4 1788 1152 249 102 45 chrX 157807507 157807862 -8842434 + Lx7 LINE L1 6911 7303 -393 4 1788 504 0 0 0 chrX 157807888 157807944 -8842352 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1788 1568 211 23 9 chrX 157807953 157808297 -8841999 - Lx5 LINE L1 -15 7035 6687 4 1788 527 158 10 10 chrX 157808488 157808584 -8841712 + RLTR28 LTR ERVL 415 510 -14 4 1788 319 288 76 0 chrX 157808794 157808926 -8841370 + L1MC LINE L1 2527 2668 -3478 4 1788 568 250 70 0 chrX 157809290 157809518 -8840778 + L1M2 LINE L1 5075 5318 -825 4 1788 477 234 17 185 chrX 157809530 157809703 -8840593 + B1F SINE Alu 6 149 0 4 1788 225 65 0 0 chrX 157809716 157809747 -8840549 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 4 1788 671 233 180 17 chrX 157809750 157810063 -8840233 + L1M2 LINE L1 5326 5689 -602 4 1788 186 272 134 12 chrX 157810252 157810334 -8839962 - MIR3 SINE MIR -103 105 14 4 1788 945 134 202 5 chrX 157810426 157810614 -8839682 - URR1A DNA MER1_type 0 226 2 4 1789 277 277 46 0 chrX 157812063 157812128 -8838168 - RSINE1 SINE B4 -90 75 8 4 1789 327 354 20 7 chrX 157812286 157812434 -8837862 - MIRc SINE MIR -6 262 113 4 1789 270 328 135 8 chrX 157812434 157812560 -8837736 + MLT1J1 LTR MaLR 1 142 -302 4 1789 215 298 48 0 chrX 157812751 157812835 -8837461 - MIRc SINE MIR -150 118 31 4 1789 724 285 140 0 chrX 157813242 157813442 -8836854 + B4A SINE B4 1 228 -64 4 1789 22 0 0 0 chrX 157814432 157814454 -8835842 + AT_rich Low_complexity Low_complexity 1 22 0 4 1789 818 331 41 4 chrX 157814736 157814979 -8835317 - B4A SINE B4 -40 252 1 4 1789 462 179 0 0 chrX 157815009 157815087 -8835209 + MTC LTR MaLR 344 421 0 4 1789 430 291 165 22 chrX 157815222 157815580 -8834716 - L1M5 LINE L1 -1628 4518 4110 4 1789 480 81 0 0 chrX 157815613 157815687 -8834609 + (TG)n Simple_repeat Simple_repeat 1 74 0 4 1789 630 0 0 0 chrX 157815688 157815758 -8834538 + (GA)n Simple_repeat Simple_repeat 1 70 0 4 1789 227 232 71 0 chrX 157815761 157815817 -8834479 - MT2B2 LTR ERVL -328 256 197 4 1789 416 150 0 0 chrX 157815768 157815828 -8834468 - PB1D10 SINE Alu -29 88 29 4 1789 1176 62 7 0 chrX 157816218 157816364 -8833932 + B1_Mus2 SINE Alu 1 147 0 4 1789 572 291 33 13 chrX 157816386 157816536 -8833760 + RSINE1 SINE B4 9 161 -4 4 1789 24 0 0 0 chrX 157816564 157816588 -8833708 + AT_rich Low_complexity Low_complexity 1 24 0 4 1789 379 222 0 11 chrX 157817029 157817120 -8833176 + RMER1B Other Other 961 1050 -16 4 1789 338 329 0 0 chrX 157817644 157817726 -8832570 - B1F SINE Alu -47 102 21 4 1789 992 263 116 44 chrX 157817746 157818196 -8832100 - Lx8 LINE L1 -2 7471 6990 4 1789 454 197 154 8 chrX 157818528 157818651 -8831645 + RLTR25B LTR ERVK 330 470 -633 4 1789 4207 49 36 4 chrX 157819127 157819658 -8830638 + L1Md_F2 LINE L1 6032 6579 -3 4 1789 643 152 12 193 chrX 157819822 157819993 -8830303 + RLTR25B LTR ERVK 632 771 -257 4 1789 291 266 77 10 chrX 157819978 157820090 -8830206 + RLTR25B LTR ERVK 914 1075 -28 4 1789 351 208 107 31 chrX 157820293 157820438 -8829858 + Lx5 LINE L1 6879 7033 -17 4 1789 294 29 0 0 chrX 157820438 157820473 -8829823 + (CATA)n Simple_repeat Simple_repeat 2 36 0 4 1789 351 208 107 31 chrX 157820473 157820486 -8829810 + Lx5 LINE L1 7034 7048 -2 4 1789 348 303 52 22 chrX 157820659 157820794 -8829502 + LTR16C LTR ERVL 351 489 0 4 1789 202 100 24 48 chrX 157821647 157821689 -8828607 + L3b LINE CR1 429 469 -13 4 1789 532 271 16 32 chrX 157821862 157821988 -8828308 + RSINE1 SINE B4 2 125 -40 4 1789 410 79 16 0 chrX 157821988 157822051 -8828245 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 1789 1688 142 4 170 chrX 157822297 157822779 -8827517 - RMER17C LTR ERVK -8 402 1 4 1789 1518 227 73 26 chrX 157822967 157823147 -8827149 + L1_Mur3 LINE L1 828 1002 -6726 4 1789 414 0 0 0 chrX 157823147 157823193 -8827103 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1789 1518 197 179 16 chrX 157823193 157823613 -8826683 + L1_Mur3 LINE L1 1003 1500 -4380 4 1789 375 134 0 0 chrX 157823802 157823884 -8826412 + (TC)n Simple_repeat Simple_repeat 1 82 0 4 1789 716 225 26 13 chrX 157823889 157824042 -8826254 - B3 SINE B2 -61 155 1 4 1789 387 301 65 8 chrX 157824279 157824499 -8825797 + B4A SINE B4 2 282 -10 4 1789 239 340 63 20 chrX 157824574 157824826 -8825470 + L1M2c LINE L1 101 363 -6667 4 1789 283 364 45 0 chrX 157825414 157825546 -8824750 + L1M2c LINE L1 199 336 -6694 4 1789 384 303 67 46 chrX 157825540 157825779 -8824517 + L1M2c LINE L1 2313 2556 -4551 4 1789 1323 263 96 2 chrX 157825784 157826294 -8824002 + L1MA6 LINE L1 5743 6300 0 5 1789 7022 52 22 0 chrX 157826291 157827213 -8823083 + L1_Mus2 LINE L1 5625 6566 0 5 1789 222 222 0 0 chrX 157827219 157827273 -8823023 + A-rich Low_complexity Low_complexity 1 54 0 5 1789 595 268 62 18 chrX 157827273 157827473 -8822823 + B3A SINE B2 2 211 -5 5 1789 402 286 0 35 chrX 157827475 157827562 -8822734 + B4 SINE B4 209 292 0 5 1789 396 103 0 0 chrX 157827608 157827666 -8822630 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 1789 303 350 19 46 chrX 157827878 157827986 -8822310 + PB1 SINE Alu 21 125 -2 5 1789 2446 82 120 0 chrX 157828406 157828773 -8821523 + IAPLTR2a LTR ERVK 1 411 0 5 1789 1450 284 78 20 chrX 157828955 157829689 -8820607 + Lx8 LINE L1 4474 5249 -631 5 1789 1625 189 92 24 chrX 157829704 157830073 -8820223 - MTD LTR MaLR -14 405 12 5 1789 544 306 22 93 chrX 157830111 157830185 -8820111 + L1M2 LINE L1 5299 5358 -939 5 1789 1103 93 0 6 chrX 157830185 157830357 -8819939 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 5 1789 544 306 22 93 chrX 157830357 157830606 -8819690 + L1M2 LINE L1 5359 5599 -698 5 1789 221 57 0 28 chrX 157830606 157830642 -8819654 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 5 1789 1104 174 23 5 chrX 157830967 157831186 -8819110 + Lx5 LINE L1 6824 7046 -4 5 1789 1068 8 0 0 chrX 157831274 157831395 -8818901 + (CCCCAG)n Simple_repeat Simple_repeat 2 122 0 5 1789 1169 304 102 50 chrX 157831464 157832583 -8817713 + Lx8 LINE L1 5609 6768 -705 5 1789 711 311 19 5 chrX 157833389 157833602 -8816694 + B4A SINE B4 3 218 -74 5 1789 497 164 45 97 chrX 157833610 157833765 -8816531 + Lx7 LINE L1 7550 7696 0 5 1789 531 215 74 37 chrX 157834104 157834239 -8816057 + MLT1A0 LTR MaLR 23 162 -203 5 1789 278 260 9 111 chrX 157834240 157834348 -8815948 + PB1D10 SINE Alu 13 109 -8 5 1789 284 309 68 75 chrX 157834341 157834357 -8815939 + B4 SINE B4 67 125 -167 5 1789 540 256 44 58 chrX 157834357 157834402 -8815894 + B1_Mur2 SINE Alu 1 44 -105 5 1789 4171 165 113 54 chrX 157834402 157834900 -8815396 + RMER19B LTR ERVK 1 484 -418 5 1789 851 112 8 0 chrX 157834900 157835034 -8815262 + (TTC)n Simple_repeat Simple_repeat 3 137 0 5 1789 4171 165 113 54 chrX 157835034 157835387 -8814909 + RMER19B LTR ERVK 485 902 0 5 1789 284 309 68 75 chrX 157835387 157835458 -8814838 + B4 SINE B4 126 198 -94 5 1789 540 256 44 58 chrX 157835458 157835478 -8814818 + B1_Mur2 SINE Alu 45 135 -14 5 1789 1163 222 5 0 chrX 157835515 157835722 -8814574 + B3 SINE B2 2 209 -7 5 1789 539 316 24 6 chrX 157835770 157835939 -8814357 + MLT1A0 LTR MaLR 168 339 -26 5 1789 807 145 28 48 chrX 157835937 157836082 -8814214 - RMER6A LTR ERVK -7 749 608 5 1789 3153 203 71 2 chrX 157836116 157836810 -8813486 - Lx3C LINE L1 -5 6995 6246 5 1789 329 330 143 0 chrX 157836812 157837036 -8813260 - L1M4 LINE L1 -831 5315 5060 5 1789 342 272 53 71 chrX 157837417 157837587 -8812709 - L1MC LINE L1 -3483 2663 2497 5 1789 521 169 10 10 chrX 157837778 157837874 -8812422 - RLTR28 LTR ERVL -14 510 415 5 1789 24112 164 49 42 chrX 157838047 157840015 -8810281 + Lx4B LINE L1 867 2784 -3093 5 1789 180 0 0 0 chrX 157840015 157840035 -8810261 + (CAA)n Simple_repeat Simple_repeat 1 20 0 5 1789 24112 157 60 20 chrX 157840035 157844053 -8806243 + Lx4B LINE L1 2785 7058 0 5 1789 2354 154 51 7 chrX 157844055 157844468 -8805828 - RLTR28 LTR ERVL -93 431 1 5 1789 453 344 74 22 chrX 157844468 157844697 -8805599 - LTR16C LTR ERVL -88 401 161 5 1789 357 296 26 58 chrX 157846439 157846593 -8803703 - B1F1 SINE Alu 0 149 1 5 1789 1305 83 0 0 chrX 157846605 157846785 -8803511 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 5 1789 722 152 0 11 chrX 157846785 157846953 -8803343 + CT-rich Low_complexity Low_complexity 1 166 0 5 1789 1112 119 6 0 chrX 157846961 157847138 -8803158 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 5 1789 3808 186 25 24 chrX 157847138 157847926 -8802370 - Lx5 LINE L1 -6 7044 6156 5 1789 732 201 64 32 chrX 157847922 157848198 -8802098 - L1_Mur2 LINE L1 -1338 4802 4647 5 1789 274 303 65 16 chrX 157848488 157848612 -8801684 - L1ME4a LINE L1 -1 6123 5994 5 1789 243 329 160 35 chrX 157848640 157849147 -8801149 - L1ME4a LINE L1 -195 5929 5360 5 1789 711 299 53 5 chrX 157849210 157849398 -8800898 - B3 SINE B2 -16 200 4 5 1789 6001 168 56 33 chrX 157849406 157850651 -8799645 + Lx2B LINE L1 5739 7000 0 5 1789 264 262 97 0 chrX 157850653 157850736 -8799560 - B1F SINE Alu -51 98 1 5 1789 273 323 37 88 chrX 157850802 157851019 -8799277 - L1MCb LINE L1 -5092 953 748 5 1789 749 93 9 0 chrX 157851050 157851157 -8799139 + ORR1C2 LTR MaLR 275 382 -2 5 1789 405 0 0 0 chrX 157851870 157851915 -8798381 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1789 374 258 43 11 chrX 157852155 157852249 -8798047 - PB1D10 SINE Alu -20 97 1 5 1789 441 298 0 43 chrX 157852269 157852455 -8797841 + CT-rich Low_complexity Low_complexity 3 180 0 5 1789 780 147 43 29 chrX 157853237 157853377 -8796919 + B1_Mur2 SINE Alu 1 142 -7 5 1789 32556 87 15 10 chrX 157853598 157859007 -8791289 + L1Md_F2 LINE L1 153 5585 -298 5 1789 8129 66 9 2 chrX 157859008 157859985 -8790311 + L1Md_F2 LINE L1 5587 6570 -12 5 1789 206 125 0 20 chrX 157860049 157860098 -8790198 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 5 1789 415 224 53 53 chrX 157860392 157860505 -8789791 + B3 SINE B2 77 189 -27 5 1789 381 289 0 0 chrX 157860791 157860895 -8789401 + MER33 DNA MER1_type 5 108 -216 5 1789 228 200 0 0 chrX 157860928 157860983 -8789313 + MER33 DNA MER1_type 195 249 -75 5 1789 550 331 46 80 chrX 157860984 157861286 -8789010 - B4 SINE B4 0 292 1 5 1789 353 266 85 37 chrX 157861324 157861488 -8788808 - Lx8 LINE L1 -4 7469 7298 5 1789 1016 194 90 28 chrX 157861488 157861700 -8788596 - URR1B DNA MER1_type 0 225 1 5 1789 6797 91 21 75 chrX 157861719 157862867 -8787429 + MTB-int LTR MaLR 13 1098 0 5 1789 3417 53 10 0 chrX 157862867 157863263 -8787033 + MTB LTR MaLR 1 400 0 5 1789 482 282 0 17 chrX 157863395 157863514 -8786782 - PB1D9 SINE Alu -2 118 2 5 1789 1526 214 105 25 chrX 157863851 157864297 -8785999 + Lx9 LINE L1 7163 7644 0 5 1789 477 0 0 0 chrX 157865181 157865234 -8785062 + (TC)n Simple_repeat Simple_repeat 1 53 0 5 1789 23 54 0 0 chrX 157865601 157865638 -8784658 + AT_rich Low_complexity Low_complexity 1 37 0 5 1789 297 314 49 33 chrX 157866473 157866595 -8783701 - L2a LINE L2 0 3426 3303 5 1789 1007 220 33 9 chrX 157866761 157866972 -8783324 + B3 SINE B2 1 216 0 5 1789 836 99 0 0 chrX 157867057 157867178 -8783118 + L1_Mus2 LINE L1 6446 6566 0 5 1789 243 250 99 27 chrX 157867393 157867504 -8782792 + L1M5 LINE L1 5580 5698 -426 5 1789 273 111 0 62 chrX 157867708 157867756 -8782540 + L1ME4a LINE L1 6079 6123 -1 5 1789 183 114 0 0 chrX 157867762 157867797 -8782499 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1789 585 0 0 0 chrX 157867874 157867939 -8782357 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1789 376 261 166 7 chrX 157869428 157869567 -8780729 + MER2 DNA MER2_type 13 173 -172 5 1789 651 284 21 0 chrX 157869623 157869764 -8780532 - RSINE1 SINE B4 -20 145 2 5 1789 691 281 0 81 chrX 157869818 157869992 -8780304 - RSINE1 SINE B4 0 165 6 5 1789 536 286 43 27 chrX 157869999 157870186 -8780110 + MER2 DNA MER2_type 151 340 -5 5 1789 407 223 41 41 chrX 157871119 157871217 -8779079 + B1F SINE Alu 52 149 0 5 1789 349 257 71 35 chrX 157871426 157871567 -8778729 - L1MA6 LINE L1 -116 6184 6039 5 1789 637 278 74 37 chrX 157871684 157871953 -8778343 + L1M2 LINE L1 4092 4370 -1773 5 1789 391 313 105 4 chrX 157871958 157872205 -8778091 - L1M3e LINE L1 -4424 2683 2412 5 1789 780 226 93 29 chrX 157872209 157872414 -8777882 - ID_B1 SINE B4 0 224 7 5 1789 1109 244 62 144 chrX 157872831 157873282 -8777014 + MTD LTR MaLR 6 419 0 5 1789 1922 23 0 0 chrX 157874664 157874879 -8775417 + L1Md_F2 LINE L1 5372 5586 -297 5 1789 8630 43 1 8 chrX 157874879 157875881 -8774415 + L1Md_F2 LINE L1 5587 6581 -1 5 1789 3936 145 178 5 chrX 157875881 157876628 -8773668 + RMER19B LTR ERVK 27 902 0 5 1789 418 301 126 23 chrX 157876761 157877070 -8773226 - L1M3e LINE L1 -6652 378 38 5 1789 805 243 110 23 chrX 157877131 157877430 -8772866 - Charlie2b DNA MER1_type -32 2750 2426 5 1789 223 294 191 0 chrX 157877543 157877611 -8772685 + ID_B1 SINE B4 81 161 -63 5 1789 186 43 0 0 chrX 157877952 157877975 -8772321 + (TC)n Simple_repeat Simple_repeat 1 23 0 5 1789 642 26 0 0 chrX 157877975 157878050 -8772246 + (CA)n Simple_repeat Simple_repeat 1 76 0 5 1789 3243 52 8 0 chrX 157878106 157878494 -8771802 - L1_Mm LINE L1 -173 5710 5320 5 1789 3740 60 0 2 chrX 157878494 157878941 -8771355 + L1Md_F2 LINE L1 6125 6570 -12 5 1789 711 291 132 45 chrX 157878945 157879313 -8770983 - Lx8 LINE L1 -7 7466 7055 5 1789 379 233 116 31 chrX 157879561 157879691 -8770605 - L1MA4 LINE L1 -362 5938 5797 5 1789 378 0 0 0 chrX 157879691 157879733 -8770563 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1789 379 228 117 32 chrX 157879733 157879774 -8770522 - L1MA4 LINE L1 -504 5796 5752 5 1789 492 302 94 0 chrX 157879785 157879934 -8770362 - RSINE1 SINE B4 0 165 3 5 1789 407 316 113 40 chrX 157880508 157880808 -8769488 - L1MD2 LINE L1 -16 6343 6022 5 1789 6766 54 5 0 chrX 157880936 157881720 -8768576 - L1_Mus1 LINE L1 0 6567 5780 5 1789 2965 57 6 0 chrX 157881727 157882080 -8768216 - L1Md_F3 LINE L1 -1 6583 6229 5 1789 23604 72 7 8 chrX 157882080 157885898 -8764398 - L1Md_F3 LINE L1 -1630 4253 440 5 1789 2125 274 142 25 chrX 157885898 157887309 -8762987 - L1MD2 LINE L1 -691 5668 4092 5 1789 605 314 61 19 chrX 157887321 157887535 -8762761 + B4A SINE B4 11 233 -59 5 1789 314 352 0 0 chrX 157887566 157887654 -8762642 + B4A SINE B4 203 290 -2 5 1789 499 302 77 0 chrX 157888063 157888232 -8762064 + RMER30 DNA MER1_type 20 201 -1 5 1789 3198 55 5 2 chrX 157889509 157889908 -8760388 + MTB LTR MaLR 1 400 0 5 1789 2901 48 0 0 chrX 157890005 157890357 -8759939 - L1_Mus1 LINE L1 0 6567 6216 5 1789 907 52 0 0 chrX 157890357 157890473 -8759823 + L1_Mus1 LINE L1 6104 6219 -348 5 1789 914 84 52 7 chrX 157890999 157891154 -8759142 - L1_Mus4 LINE L1 -1 6635 6474 5 1789 330 88 0 0 chrX 157891153 157891210 -8759086 + Lx LINE L1 6595 6651 -3 5 1789 317 94 38 0 chrX 157891219 157891272 -8759024 + (GAAAA)n Simple_repeat Simple_repeat 2 56 0 5 1789 2004 152 5 46 chrX 157891298 157891690 -8758606 - L1_Mm LINE L1 -1025 4858 4483 5 1789 369 0 0 0 chrX 157891809 157891850 -8758446 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1789 297 0 0 0 chrX 157891850 157891882 -8758414 + (GA)n Simple_repeat Simple_repeat 2 34 0 6 1789 1045 289 76 26 chrX 157891882 157892184 -8758112 - MER2 DNA MER2_type -28 317 1 6 1789 320 325 67 94 chrX 157892611 157892791 -8757505 + MLT1A LTR MaLR 8 182 -192 6 1789 419 223 48 19 chrX 157893214 157893275 -8757021 - B4A SINE B4 -18 274 211 6 1789 274 327 82 82 chrX 157893275 157893458 -8756838 + MER5A DNA MER1_type 1 183 -6 6 1789 1272 219 36 18 chrX 157893775 157893974 -8756322 - ORR1D1 LTR MaLR -3 371 175 6 1789 218 89 44 0 chrX 157893974 157894019 -8756277 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 6 1789 1272 219 36 18 chrX 157894019 157894098 -8756198 - ORR1D1 LTR MaLR -200 174 89 6 1789 1150 90 26 31 chrX 157894098 157894292 -8756004 - Lx LINE L1 -3 6651 6459 6 1789 1020 51 7 0 chrX 157894289 157894427 -8755869 + L1_Mus2 LINE L1 6427 6565 -1 6 1789 1326 61 128 0 chrX 157894439 157894635 -8755661 - Lx LINE L1 -193 6461 6241 6 1789 492 192 80 10 chrX 157894635 157894735 -8755561 - ORR1D1 LTR MaLR -267 107 1 6 1789 231 167 0 0 chrX 157894795 157894837 -8755459 + (TA)n Simple_repeat Simple_repeat 1 42 0 6 1789 4061 177 45 57 chrX 157895292 157896207 -8754089 - RMER13B LTR ERVK -4 904 1 6 1789 308 286 146 31 chrX 157896283 157896413 -8753883 + ID_B1 SINE B4 78 222 -2 6 1789 410 219 0 118 chrX 157896299 157896418 -8753878 + PB1D10 SINE Alu 13 117 0 6 1789 198 0 0 0 chrX 157896488 157896510 -8753786 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 6 1789 754 305 132 18 chrX 157896510 157897170 -8753126 - L1MB8 LINE L1 -72 6106 5378 6 1789 215 306 25 0 chrX 157897510 157897581 -8752715 - L2c LINE L2 -33 3393 3296 6 1789 428 232 42 61 chrX 157897596 157897761 -8752535 + Lx7 LINE L1 6699 6860 -836 6 1789 1605 288 140 54 chrX 157897773 157898565 -8751731 - RMER13A LTR ERVK 0 860 1 6 1789 1046 306 33 26 chrX 157898569 157898998 -8751298 + Lx7 LINE L1 6876 7307 -389 6 1789 185 357 111 67 chrX 157899275 157899410 -8750886 - L2c LINE L2 -245 3142 3002 6 1789 247 343 141 0 chrX 157900210 157900309 -8749987 + Tigger12 DNA MER2_type 2 114 -1845 6 1789 3259 164 7 18 chrX 157900446 157901060 -8749236 + RMER1A Other Other 266 939 -127 6 1789 396 0 0 0 chrX 157901060 157901104 -8749192 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1789 3130 200 29 17 chrX 157901104 157901209 -8749087 + RMER1B Other Other 940 1053 -13 6 1789 887 295 52 12 chrX 157901556 157901958 -8748338 - L1MC4 LINE L1 -151 7891 7474 6 1789 360 317 89 42 chrX 157903163 157903331 -8746965 + MLT1J1 LTR MaLR 1 176 -268 6 1789 243 262 45 45 chrX 157903341 157903429 -8746867 + MLT1J1 LTR MaLR 344 431 -13 6 1789 26 50 0 0 chrX 157903429 157903469 -8746827 + AT_rich Low_complexity Low_complexity 1 40 0 6 1789 2226 90 93 28 chrX 157903648 157904001 -8746295 - Lx LINE L1 -2 6652 6277 6 1789 2159 75 15 0 chrX 157904001 157904336 -8745960 + MusHAL1 LINE L1 128 467 -2245 6 1789 1462 204 175 3 chrX 157904922 157905271 -8745025 - MTD LTR MaLR -3 416 8 6 1789 624 314 142 4 chrX 157905596 157905849 -8744447 - B4A SINE B4 -3 289 2 6 1789 2009 164 30 58 chrX 157906011 157906406 -8743890 - ORR1C2 LTR MaLR 0 384 1 6 1789 369 265 12 0 chrX 157906424 157906507 -8743789 + RMER30 DNA MER1_type 7 90 -112 6 1789 726 252 60 0 chrX 157906514 157906665 -8743631 + RSINE1 SINE B4 2 161 -4 6 1789 324 83 0 0 chrX 157906666 157906714 -8743582 + (TC)n Simple_repeat Simple_repeat 1 48 0 6 1789 338 317 18 7 chrX 157907351 157907493 -8742803 - MIR SINE MIR -95 173 22 6 1789 284 217 0 0 chrX 157908283 157908343 -8741953 - L1MA9 LINE L1 -64 6248 6189 6 1789 21 36 0 0 chrX 157909724 157909752 -8740544 + AT_rich Low_complexity Low_complexity 1 28 0 6 1789 1077 70 21 0 chrX 157910577 157910720 -8739576 + B1_Mm SINE Alu 2 147 0 6 1789 245 51 0 25 chrX 157910726 157910766 -8739530 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1789 285 118 0 0 chrX 157910906 157910957 -8739339 + (T)n Simple_repeat Simple_repeat 1 51 0 6 1789 284 70 0 23 chrX 157911120 157911164 -8739132 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1789 284 333 39 93 chrX 157911192 157911321 -8738975 - RSINE1 SINE B4 -40 125 4 6 1789 441 355 21 36 chrX 157911322 157911515 -8738781 - MIR SINE MIR -71 191 2 6 1789 289 406 24 0 chrX 157911561 157911726 -8738570 - Tigger12c DNA MER2_type -560 174 6 6 1789 540 45 0 0 chrX 157911983 157912050 -8738246 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1789 399 267 149 8 chrX 157912103 157912224 -8738072 - RMER15 LTR ERVL -13 562 425 6 1789 189 341 194 0 chrX 157913231 157913360 -8736936 + MIRb SINE MIR 26 179 -89 6 1789 186 236 0 0 chrX 157913562 157913617 -8736679 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 1789 3213 275 22 18 chrX 157913653 157914606 -8735690 + Lx9 LINE L1 6468 7424 -220 6 1789 654 242 34 0 chrX 157914781 157914930 -8735366 + MTC LTR MaLR 213 366 -55 6 1789 405 244 130 10 chrX 157915008 157915215 -8735081 - L1MD LINE L1 -1710 4436 4205 6 1789 228 345 98 33 chrX 157915464 157915617 -8734679 + MamSINE1 SINE tRNA 128 290 0 6 1789 655 263 0 0 chrX 157915993 157916130 -8734166 + B1_Mur1 SINE Alu 1 137 -12 6 1789 1274 281 153 5 chrX 157916717 157917325 -8732971 + L1MC4a LINE L1 7185 7882 0 6 1789 672 139 182 6 chrX 157917645 157917712 -8732584 + Lx9 LINE L1 7431 7497 -147 6 1789 446 49 0 16 chrX 157917712 157917774 -8732522 + (TCTA)n Simple_repeat Simple_repeat 1 61 0 6 1789 672 139 182 6 chrX 157917774 157917887 -8732409 + Lx9 LINE L1 7498 7643 -1 6 1789 465 121 0 0 chrX 157918208 157918291 -8732005 + (TC)n Simple_repeat Simple_repeat 2 84 0 6 1789 474 33 0 0 chrX 157918293 157918353 -8731943 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 1789 616 257 0 42 chrX 157919583 157919725 -8730571 - B1_Mur1 SINE Alu -13 136 1 6 1789 270 0 0 0 chrX 157919732 157919762 -8730534 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 1789 612 319 127 41 chrX 157919762 157920030 -8730266 - B4A SINE B4 0 292 2 6 1789 428 301 90 28 chrX 157920111 157920323 -8729973 - MIRb SINE MIR 0 268 44 6 1789 213 350 0 49 chrX 157920567 157920669 -8729627 + MIRb SINE MIR 45 141 -127 6 1789 1071 117 0 0 chrX 157920959 157921130 -8729166 + (TA)n Simple_repeat Simple_repeat 2 172 0 6 1789 1135 30 0 0 chrX 157921549 157921684 -8728612 + B1_Mus2 SINE Alu 1 135 -12 6 1789 216 0 0 0 chrX 157921685 157921709 -8728587 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1789 1280 147 0 0 chrX 157922728 157922953 -8727343 - L1Md_F LINE L1 -6081 438 214 6 1789 4326 53 7 2 chrX 157922953 157923498 -8726798 + L1Md_F2 LINE L1 6035 6582 0 6 1789 362 302 74 48 chrX 157924938 157925248 -8725048 + L1ME3A LINE L1 5844 6161 -12 6 1789 183 80 0 0 chrX 157925445 157925470 -8724826 + (CAATA)n Simple_repeat Simple_repeat 1 25 0 6 1789 709 354 72 30 chrX 157926160 157926492 -8723804 - LTR16B1 LTR ERVL -134 346 1 6 1789 27 0 0 0 chrX 157927078 157927105 -8723191 + AT_rich Low_complexity Low_complexity 1 27 0 6 1789 750 306 75 64 chrX 157927191 157927750 -8722546 + L1MD LINE L1 3979 4543 -1603 6 1789 399 92 0 0 chrX 157928108 157928173 -8722123 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 6 1789 306 295 0 13 chrX 157928235 157928314 -8721982 + ID4_ SINE ID 2 79 -4 6 1789 29 70 0 0 chrX 157928895 157928952 -8721344 + AT_rich Low_complexity Low_complexity 1 57 0 6 1789 292 266 0 0 chrX 157929817 157929881 -8720415 + ID4_ SINE ID 2 65 -18 6 1789 1473 259 66 25 chrX 157930132 157930718 -8719578 - L1MA6 LINE L1 -80 6220 5606 6 1789 1403 73 15 20 chrX 157930718 157930914 -8719382 - B2_Mm2 SINE B2 0 195 1 6 1789 1473 259 66 25 chrX 157930914 157930930 -8719366 - L1MA6 LINE L1 -695 5605 5593 6 1789 339 333 88 36 chrX 157931120 157931257 -8719039 + B4 SINE B4 4 147 -145 6 1789 359 185 0 0 chrX 157931714 157931795 -8718501 - L1Md_F2 LINE L1 0 6582 6502 6 1789 799 29 9 9 chrX 157931802 157931907 -8718389 + L1_Mus1 LINE L1 6332 6436 -131 6 1789 261 0 0 0 chrX 157932612 157932641 -8717655 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 6 1789 5418 142 46 15 chrX 157932649 157933592 -8716704 - Lx3A LINE L1 -4 6977 6006 6 1789 3420 120 14 2 chrX 157933593 157934245 -8716051 + Lx3B LINE L1 5340 5993 -980 6 1789 1135 276 56 20 chrX 157934251 157934606 -8715690 - MTD LTR MaLR -51 368 1 6 1789 688 285 118 14 chrX 157934817 157935105 -8715191 + MER33 DNA MER1_type 7 324 0 6 1789 382 311 166 29 chrX 157937475 157937680 -8712616 + Kanga1a DNA Tc2 261 493 -261 6 1789 472 284 30 7 chrX 157937831 157937966 -8712330 - B1F2 SINE Alu 0 149 12 6 1789 389 342 19 26 chrX 157937966 157937987 -8712309 - ID_B1 SINE B4 0 224 70 6 1789 2239 133 50 11 chrX 157938075 157938454 -8711842 + ORR1B1 LTR MaLR 1 394 0 6 1789 251 257 203 0 chrX 157938726 157938800 -8711496 - PB1D10 SINE Alu -5 112 24 6 1789 423 0 0 0 chrX 157938877 157938924 -8711372 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1789 306 0 0 0 chrX 157938924 157938957 -8711339 + (GA)n Simple_repeat Simple_repeat 2 35 0 6 1789 771 226 113 17 chrX 157939178 157939443 -8710853 + Lx9 LINE L1 5796 6084 -1560 6 1789 792 290 165 36 chrX 157939649 157940088 -8710208 - RLTR26 LTR ERVK -81 546 1 6 1789 2416 178 42 106 chrX 157940146 157940844 -8709452 + Lx9 LINE L1 6991 7643 -1 6 1789 377 54 18 0 chrX 157941236 157941292 -8709004 + (TC)n Simple_repeat Simple_repeat 2 58 0 6 1789 306 0 0 0 chrX 157941590 157941624 -8708672 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 6 1789 638 58 11 0 chrX 157941624 157941711 -8708585 + (GGAA)n Simple_repeat Simple_repeat 1 88 0 6 1790 351 315 70 16 chrX 157941888 157942075 -8708221 - RLTR42-int LTR ERVK -4153 1369 1173 6 1790 240 202 156 46 chrX 157942255 157942364 -8707932 + Tigger15a DNA TcMar 482 602 -113 6 1790 283 192 0 0 chrX 157942370 157942422 -8707874 + B2_Mm2 SINE B2 1 52 -143 6 1790 309 238 138 14 chrX 157942431 157942576 -8707720 + Charlie5 DNA MER1_type 2440 2602 -22 7 1790 235 229 21 0 chrX 157942983 157943031 -8707265 - MIRb SINE MIR -6 262 214 7 1790 268 322 74 8 chrX 157943316 157943438 -8706858 - MIRb SINE MIR -122 146 17 7 1790 761 82 9 0 chrX 157946087 157946197 -8704099 + (TTCC)n Simple_repeat Simple_repeat 3 113 0 7 1790 313 293 30 71 chrX 157946203 157946302 -8703994 - PB1D10 SINE Alu -18 99 5 7 1790 538 320 26 7 chrX 157946229 157946380 -8703916 - ID_B1 SINE B4 -66 158 5 7 1790 367 319 0 0 chrX 157946399 157946493 -8703803 - ID_B1 SINE B4 -130 94 1 7 1790 630 293 47 10 chrX 157947457 157947650 -8702646 + MER20 DNA MER1_type 1 200 -19 7 1790 181 262 47 47 chrX 157948040 157948104 -8702192 - L2a LINE L2 -48 3378 3315 7 1790 384 77 0 0 chrX 157948197 157948249 -8702047 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 1790 596 226 105 0 chrX 157948249 157948373 -8701923 - RSINE1 SINE B4 -25 140 4 7 1790 496 330 142 14 chrX 157949774 157950069 -8700227 - MLT1C LTR MaLR 0 467 135 7 1790 480 258 91 8 chrX 157950153 157950274 -8700022 - ID_B1 SINE B4 0 224 94 7 1790 411 111 40 20 chrX 157950318 157950419 -8699877 + (TCTCTG)n Simple_repeat Simple_repeat 6 108 0 7 1790 547 241 73 29 chrX 157950424 157950561 -8699735 - B3A SINE B2 -16 182 40 7 1790 1293 97 16 0 chrX 157950731 157950916 -8699380 - B2_Mm2 SINE B2 -7 188 1 7 1790 272 346 9 18 chrX 157952122 157952231 -8698065 - MIR SINE MIR -46 216 109 7 1790 468 0 0 0 chrX 157952779 157952831 -8697465 + (GA)n Simple_repeat Simple_repeat 1 52 0 7 1790 437 241 17 26 chrX 157953727 157953842 -8696454 - PB1D10 SINE Alu 0 117 4 7 1790 984 264 61 77 chrX 157955788 157956165 -8694131 - MTEa LTR MaLR -8 371 1 7 1790 225 289 19 67 chrX 157956511 157956615 -8693681 + RMER12 LTR ERVK 727 825 -497 7 1790 545 314 84 13 chrX 157956726 157956952 -8693344 - MIR SINE MIR -14 248 7 7 1790 531 325 126 15 chrX 157958152 157958421 -8691875 - LTR16C LTR ERVL -116 373 75 7 1790 474 311 65 117 chrX 157958476 157958830 -8691466 + MLT1A1 LTR MaLR 1 374 0 7 1790 699 244 139 0 chrX 157959031 157959211 -8691085 + B3 SINE B2 12 216 0 7 1790 369 321 84 10 chrX 157959977 157960276 -8690020 - L1ME3A LINE L1 -17 6156 5836 7 1790 329 0 0 24 chrX 157960295 157960337 -8689959 + (TTA)n Simple_repeat Simple_repeat 2 42 0 7 1790 180 77 0 0 chrX 157960469 157960495 -8689801 + (CAAAC)n Simple_repeat Simple_repeat 2 27 0 7 1790 257 362 189 0 chrX 157960655 157960840 -8689456 - MIR SINE MIR -22 240 21 7 1790 331 268 151 20 chrX 157961394 157961548 -8688748 - MER3 DNA MER1_type -69 140 2 7 1790 420 233 211 0 chrX 157961521 157961654 -8688642 + MER5A1 DNA MER1_type 1 161 -5 7 1790 218 193 0 17 chrX 157961765 157961823 -8688473 + CT-rich Low_complexity Low_complexity 1 57 0 7 1790 770 275 91 4 chrX 157962803 157963055 -8687241 + MER58B DNA MER1_type 14 287 -54 7 1790 354 129 0 0 chrX 157963867 157963929 -8686367 + (TCC)n Simple_repeat Simple_repeat 2 63 0 7 1790 279 0 0 0 chrX 157963937 157963968 -8686328 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 1790 291 339 127 0 chrX 157963969 157964087 -8686209 - B1F SINE Alu -10 139 7 7 1790 227 203 17 0 chrX 157964188 157964247 -8686049 + (TG)n Simple_repeat Simple_repeat 1 60 0 7 1790 518 307 40 146 chrX 157964247 157964568 -8685728 - B4A SINE B4 0 292 6 7 1790 1158 308 15 33 chrX 157964633 157964962 -8685334 - MLT1A0 LTR MaLR -28 337 15 7 1790 616 314 113 35 chrX 157965524 157965977 -8684319 + Charlie4a DNA MER1_type 20 507 -1 7 1790 283 340 70 0 chrX 157966073 157966173 -8684123 + MLT1L LTR MaLR 140 246 -364 7 1790 318 302 116 49 chrX 157966715 157966964 -8683332 - L1M5 LINE L1 -2912 3234 2957 7 1790 861 241 43 76 chrX 157966964 157967265 -8683031 - B4 SINE B4 -1 291 1 7 1790 318 302 116 49 chrX 157967265 157967548 -8682748 - L1M5 LINE L1 -3190 2956 2666 7 1790 234 245 19 0 chrX 157967880 157967933 -8682363 + GA-rich Low_complexity Low_complexity 4 57 0 7 1790 545 194 0 20 chrX 157968778 157968878 -8681418 + RMER17C LTR ERVK 305 402 -8 7 1790 425 248 7 81 chrX 157971444 157971593 -8678703 + BC1_Mm scRNA scRNA 4 141 -11 7 1790 383 259 28 41 chrX 157972502 157972647 -8677649 - Charlie5 DNA MER1_type 0 2624 2482 7 1790 222 91 0 0 chrX 157972661 157972694 -8677602 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 1790 237 303 26 13 chrX 157972714 157972791 -8677505 - B4A SINE B4 -213 79 2 7 1790 384 245 103 36 chrX 157972791 157972943 -8677353 - Charlie5 DNA MER1_type -123 2501 2339 7 1790 440 195 27 0 chrX 157973072 157973221 -8677075 + (TA)n Simple_repeat Simple_repeat 1 153 0 7 1790 351 373 35 26 chrX 157973625 157973851 -8676445 - MIR SINE MIR -24 238 18 7 1790 399 331 38 13 chrX 157974184 157974343 -8675953 - MER5A1 DNA MER1_type -2 164 2 7 1790 683 172 0 7 chrX 157974344 157974479 -8675817 + GA-rich Low_complexity Low_complexity 3 136 0 7 1790 218 106 42 21 chrX 157974887 157974935 -8675361 + T-rich Low_complexity Low_complexity 2 50 0 7 1790 314 271 8 116 chrX 157974949 157975070 -8675226 - L2a LINE L2 -1 3425 3318 7 1790 1149 256 75 28 chrX 157975320 157975678 -8674618 - MER57C2 LTR ERV1 -59 375 1 7 1790 565 198 196 35 chrX 157977098 157977188 -8673108 - RMER30 DNA MER1_type 0 202 99 7 1790 746 58 19 0 chrX 157977188 157977291 -8673005 + (TTTC)n Simple_repeat Simple_repeat 3 107 0 7 1790 321 26 0 0 chrX 157977297 157977335 -8672961 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 1790 270 0 0 0 chrX 157977335 157977364 -8672932 + (GA)n Simple_repeat Simple_repeat 1 30 0 7 1790 565 198 196 35 chrX 157977364 157977438 -8672858 - RMER30 DNA MER1_type -113 89 3 7 1790 2771 68 0 16 chrX 157978184 157978560 -8671736 + L1Md_F2 LINE L1 6213 6582 0 7 1790 181 342 25 12 chrX 157978647 157978727 -8671569 - MIRb SINE MIR -79 189 109 7 1790 36330 30 0 0 chrX 157978814 157985462 -8664834 - L1Md_T LINE L1 0 6585 1 7 1790 25 0 0 0 chrX 157985733 157985758 -8664538 + AT_rich Low_complexity Low_complexity 1 25 0 7 1790 2094 154 8 19 chrX 157985829 157986193 -8664103 - Lx4A LINE L1 -2 7056 6697 7 1790 10723 15 0 0 chrX 157986193 157987478 -8662818 + L1Md_A LINE L1 4302 5586 -297 7 1790 8340 40 0 0 chrX 157987478 157988474 -8661822 + L1Md_A LINE L1 5587 6582 0 7 1790 1771 156 9 9 chrX 157988477 157988795 -8661501 - Lx4A LINE L1 -352 6706 6389 7 1790 21 0 0 0 chrX 157988806 157988827 -8661469 + AT_rich Low_complexity Low_complexity 1 21 0 7 1790 491 253 99 7 chrX 157989629 157989780 -8660516 + MER5A DNA MER1_type 19 183 -6 7 1790 323 301 184 0 chrX 157990075 157990178 -8660118 + PB1 SINE Alu 4 125 -2 7 1790 406 211 122 34 chrX 157990344 157990373 -8659923 - Charlie4a DNA MER1_type -264 244 211 7 1790 495 0 0 0 chrX 157990373 157990428 -8659868 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 7 1790 406 211 122 34 chrX 157990428 157990441 -8659855 - Charlie4a DNA MER1_type -298 210 193 7 1790 3280 42 20 0 chrX 157990441 157990844 -8659452 + RLTR10A LTR ERVK 1 411 0 7 1790 406 211 122 34 chrX 157990844 157990944 -8659352 - Charlie4a DNA MER1_type -316 192 88 7 1790 634 253 308 81 chrX 157990944 157991262 -8659034 + MLT1D LTR MaLR 1 390 -115 7 1790 506 279 82 0 chrX 157991319 157991441 -8658855 + RSINE1 SINE B4 3 134 -31 7 1790 536 295 0 13 chrX 157991752 157991893 -8658403 - B4 SINE B4 -67 157 22 7 1790 594 311 110 104 chrX 157991945 157992037 -8658259 + L1M5 LINE L1 4365 4455 -1691 7 1790 1673 119 27 143 chrX 157992037 157992408 -8657888 + ORR1A4 LTR MaLR 1 328 -1 7 1790 594 311 110 104 chrX 157992408 157992506 -8657790 + L1M5 LINE L1 4456 4547 -1599 7 1790 1241 48 0 0 chrX 157992506 157992652 -8657644 + B1_Mm SINE Alu 2 147 0 7 1790 594 311 110 104 chrX 157992652 157993232 -8657064 + L1M5 LINE L1 4548 5141 -1005 7 1790 243 0 0 0 chrX 157993631 157993658 -8656638 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1790 452 295 7 58 chrX 157993664 157993801 -8656495 - MER20 DNA MER1_type -5 214 85 7 1790 821 239 20 56 chrX 157993924 157994119 -8656177 - B3 SINE B2 -27 189 2 7 1790 383 305 117 89 chrX 157995460 157995741 -8654555 + L1M5 LINE L1 5492 5780 -344 7 1790 801 67 0 0 chrX 157995758 157995863 -8654433 - B1_Mm SINE Alu 0 147 43 7 1790 309 290 39 39 chrX 157995792 157995896 -8654400 - RLTR25A LTR ERVK -516 587 484 7 1790 729 211 0 0 chrX 157996010 157996133 -8654163 - B3 SINE B2 -86 130 8 7 1790 21 0 0 0 chrX 157996262 157996283 -8654013 + AT_rich Low_complexity Low_complexity 1 21 0 7 1790 25 65 0 0 chrX 157996288 157996334 -8653962 + AT_rich Low_complexity Low_complexity 1 46 0 7 1790 933 113 11 6 chrX 157996794 157996972 -8653324 + (TC)n Simple_repeat Simple_repeat 2 180 0 7 1790 1096 277 41 38 chrX 157997761 157998106 -8652190 + MLT1A0 LTR MaLR 13 358 -7 7 1790 263 272 0 47 chrX 157998120 157998205 -8652091 - MLT1A0 LTR MaLR -4 361 281 7 1790 432 0 0 0 chrX 157998350 157998398 -8651898 + (TTA)n Simple_repeat Simple_repeat 1 48 0 7 1790 7512 58 3 0 chrX 157998398 158000000 -8650296 - L1Md_F2 LINE L1 -23 6559 4954 7 1790 405 102 0 0 chrX 158000000 158000059 -8650237 - L1_Mm LINE L1 -930 4953 4895 1 1790 6525 55 0 0 chrX 158000057 158000926 -8649370 + L1_Mm LINE L1 3375 4243 -1640 2 1790 254 290 11 129 chrX 158001184 158001256 -8649040 + MIR SINE MIR 97 158 -104 3 1790 374 267 49 10 chrX 158001256 158001358 -8648938 + PB1D7 SINE Alu 1 106 -14 4 1790 254 290 11 129 chrX 158001358 158001463 -8648833 + MIR SINE MIR 159 253 -9 3 1790 3521 59 0 2 chrX 158001600 158002042 -8648254 - L1Md_F2 LINE L1 -15 6567 6127 5 1790 507 308 90 15 chrX 158002867 158003068 -8647228 - MER20 DNA MER1_type 0 219 4 6 1790 296 0 51 0 chrX 158003638 158003677 -8646619 + (TTCA)n Simple_repeat Simple_repeat 1 41 0 7 1790 280 319 35 0 chrX 158003943 158004056 -8646240 + MER117 DNA MER1_type 81 197 0 8 1790 540 111 0 0 chrX 158004140 158004221 -8646075 + (TCCC)n Simple_repeat Simple_repeat 4 84 0 9 1790 208 167 0 23 chrX 158005016 158005059 -8645237 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 1 1790 378 0 0 0 chrX 158005541 158005583 -8644713 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1790 288 0 0 0 chrX 158005583 158005614 -8644682 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 1790 299 302 48 36 chrX 158005704 158005872 -8644424 - Tigger14a DNA MER2_type -67 257 88 1 1790 1347 156 4 22 chrX 158006867 158007096 -8643200 - URR1B DNA MER1_type 0 225 1 1 1790 183 334 214 15 chrX 158007116 158007319 -8642977 + MIR SINE MIR 2 262 -14 1 1790 22 0 0 0 chrX 158007384 158007406 -8642890 + AT_rich Low_complexity Low_complexity 1 22 0 1 1790 842 287 57 29 chrX 158007406 158007650 -8642646 + B4A SINE B4 41 291 -1 1 1790 261 0 0 0 chrX 158007690 158007719 -8642577 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1790 423 0 0 0 chrX 158008082 158008129 -8642167 + (CAGG)n Simple_repeat Simple_repeat 2 48 0 1 1790 28 0 0 0 chrX 158008495 158008523 -8641773 + AT_rich Low_complexity Low_complexity 1 28 0 2 1790 221 57 0 28 chrX 158008523 158008559 -8641737 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1790 471 302 0 73 chrX 158008620 158008770 -8641526 - B1_Mur1 SINE Alu -10 139 1 2 1790 223 298 18 0 chrX 158008777 158008834 -8641462 + MIR SINE MIR 184 241 -21 2 1790 468 0 0 0 chrX 158009279 158009331 -8640965 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 1790 308 294 209 14 chrX 158009676 158009824 -8640472 + MLT1J2 LTR MaLR 1 177 -271 2 1790 330 339 102 0 chrX 158009835 158009953 -8640343 + B1F SINE Alu 1 130 -19 2 1790 229 250 124 93 chrX 158010054 158010151 -8640145 + MLT1J2 LTR MaLR 345 444 -4 2 1790 180 77 0 0 chrX 158011086 158011112 -8639184 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1790 236 256 110 47 chrX 158011267 158011394 -8638902 - MIR SINE MIR -28 234 100 2 1790 368 305 0 0 chrX 158012110 158012192 -8638104 + ID4_ SINE ID 1 82 -1 2 1790 2560 197 107 3 chrX 158012225 158012812 -8637484 - Lx2B LINE L1 -4 6996 6349 3 1790 468 280 0 8 chrX 158012921 158013040 -8637256 + B4 SINE B4 112 229 -63 3 1790 1127 302 151 26 chrX 158013431 158013927 -8636369 + MLT1G LTR MaLR 18 575 -16 3 1790 351 307 82 68 chrX 158014506 158014712 -8635584 + MIRb SINE MIR 37 245 -23 3 1790 542 261 32 81 chrX 158015865 158016086 -8634210 + B3 SINE B2 1 210 -6 3 1790 2252 113 72 0 chrX 158017169 158017504 -8632792 + ORR1B2 LTR MaLR 1 359 -8 3 1790 6156 86 34 9 chrX 158017628 158018577 -8631719 + Lx3_Mus LINE L1 6017 6988 -21 3 1790 216 0 0 0 chrX 158018577 158018601 -8631695 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 3 1790 189 107 0 0 chrX 158018679 158018707 -8631589 + (TA)n Simple_repeat Simple_repeat 1 28 0 3 1790 365 277 26 18 chrX 158019176 158019290 -8631006 - Tigger5 DNA MER2_type -1 2405 2291 3 1790 810 284 42 21 chrX 158019286 158019523 -8630773 - Tigger5 DNA MER2_type -2164 242 1 3 1790 230 324 243 0 chrX 158019652 158019792 -8630504 - MER5A DNA MER1_type -14 175 2 4 1790 385 247 43 11 chrX 158022529 158022623 -8627673 - B3 SINE B2 -119 97 1 4 1790 270 348 89 0 chrX 158022686 158022798 -8627498 + MER5A1 DNA MER1_type 11 132 -34 4 1790 234 0 0 0 chrX 158022864 158022890 -8627406 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1790 196 330 161 0 chrX 158022890 158023002 -8627294 - MER5B DNA MER1_type -48 130 1 4 1790 450 79 0 0 chrX 158023119 158023182 -8627114 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1790 1046 275 38 30 chrX 158023182 158023448 -8626848 - B4A SINE B4 -23 269 2 4 1790 21 0 0 0 chrX 158023856 158023877 -8626419 + AT_rich Low_complexity Low_complexity 1 21 0 4 1790 559 301 119 40 chrX 158023959 158024121 -8626175 + LTR82A LTR ERVL 1 188 -684 4 1790 1098 166 22 22 chrX 158024121 158024343 -8625953 + URR1A DNA MER1_type 5 226 0 4 1790 559 301 119 40 chrX 158024343 158024550 -8625746 + LTR82A LTR ERVL 189 399 -473 4 1790 327 330 22 0 chrX 158024605 158024696 -8625600 + RSINE1 SINE B4 60 152 -13 5 1790 1675 151 57 4 chrX 158024696 158024976 -8625320 + ORR1B1 LTR MaLR 3 297 -97 5 1790 1406 239 125 62 chrX 158024983 158025518 -8624778 + RMER4B LTR ERVK 17 585 0 5 1790 548 245 109 21 chrX 158025518 158025710 -8624586 + MurERV4-int LTR ERVK 1 209 -5051 5 1790 1284 89 0 0 chrX 158025711 158025891 -8624405 + (TTC)n Simple_repeat Simple_repeat 1 180 0 5 1790 758 97 7 29 chrX 158025891 158026029 -8624267 + (TCC)n Simple_repeat Simple_repeat 2 136 0 5 1790 2520 219 88 36 chrX 158026029 158026781 -8623515 + MurERV4-int LTR ERVK 190 980 -4280 5 1790 632 145 22 0 chrX 158026781 158026910 -8623386 + ORR1B1 LTR MaLR 180 387 -7 5 1790 254 200 0 39 chrX 158026943 158026995 -8623301 + LTR82A LTR ERVL 473 522 -350 4 1790 4166 58 0 2 chrX 158027062 158027577 -8622719 - L1_Mus1 LINE L1 -1 6566 6053 5 1790 259 370 27 7 chrX 158027615 158027762 -8622534 + LTR82A LTR ERVL 721 870 -2 4 1790 836 69 0 8 chrX 158027932 158028000 -8622296 + (TTC)n Simple_repeat Simple_repeat 3 70 0 5 1790 1410 56 0 0 chrX 158028000 158028180 -8622116 + (TCC)n Simple_repeat Simple_repeat 1 180 0 5 1790 836 69 0 8 chrX 158028180 158028228 -8622068 + (TTC)n Simple_repeat Simple_repeat 3 50 0 5 1790 1701 261 60 6 chrX 158028228 158028607 -8621689 - Lx8 LINE L1 -115 7358 6953 6 1790 351 0 0 0 chrX 158028607 158028646 -8621650 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1790 1701 261 60 6 chrX 158028646 158028748 -8621548 - Lx8 LINE L1 -521 6952 6851 6 1790 398 383 20 35 chrX 158030619 158030822 -8619474 + B4A SINE B4 7 206 -86 6 1790 27 0 0 0 chrX 158031206 158031233 -8619063 + AT_rich Low_complexity Low_complexity 1 27 0 6 1790 1488 155 40 176 chrX 158031328 158031704 -8618592 - ORR1C1 LTR MaLR -51 327 3 6 1790 457 339 0 16 chrX 158031917 158032043 -8618253 - PB1 SINE Alu -3 124 1 6 1790 348 240 48 8 chrX 158032247 158032373 -8617923 - Lx7 LINE L1 -1 7695 7565 6 1790 703 285 34 24 chrX 158032401 158032692 -8617604 - Lx7 LINE L1 -285 7411 7118 6 1790 2579 246 47 16 chrX 158032749 158033479 -8616817 + Lx7 LINE L1 6615 7366 -330 6 1790 273 262 16 0 chrX 158033513 158033574 -8616722 + GA-rich Low_complexity Low_complexity 5 66 0 6 1790 524 282 207 52 chrX 158034429 158034874 -8615422 + L1MEg LINE L1 1224 1737 -4505 6 1790 225 0 0 0 chrX 158034922 158034947 -8615349 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 1790 425 351 16 75 chrX 158035024 158035037 -8615259 - MER58A DNA MER1_type 0 224 212 7 1790 261 0 0 0 chrX 158035043 158035072 -8615224 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1790 1121 83 0 0 chrX 158035072 158035210 -8615086 - B1_Mus1 SINE Alu -9 139 2 7 1790 425 351 16 75 chrX 158035210 158035384 -8614912 - MER58A DNA MER1_type -13 211 48 7 1790 224 305 0 0 chrX 158035394 158035453 -8614843 - PB1D10 SINE Alu -18 99 41 7 1790 272 226 0 0 chrX 158035412 158035465 -8614831 - 4.5SRNA scRNA scRNA -15 79 27 7 1790 1018 253 111 6 chrX 158035583 158036046 -8614250 + L1MC1 LINE L1 5804 6229 -104 7 1790 344 340 19 72 chrX 158036180 158036389 -8613907 + L1MEg LINE L1 2211 2408 -3738 6 1790 21 0 0 0 chrX 158036391 158036412 -8613884 + AT_rich Low_complexity Low_complexity 1 21 0 7 1790 6173 159 63 12 chrX 158036419 158038013 -8612283 + Lx4B LINE L1 5345 7054 -4 7 1790 192 184 0 0 chrX 158038611 158038660 -8611636 + (CAT)n Simple_repeat Simple_repeat 3 51 0 7 1790 379 296 21 7 chrX 158039099 158039242 -8611054 - Charlie5 DNA MER1_type -234 2390 2246 8 1790 932 251 71 6 chrX 158039389 158039714 -8610582 - L1MC3 LINE L1 -177 7608 7263 8 1790 880 252 107 61 chrX 158039874 158040381 -8609915 - Lx7 LINE L1 0 7696 7167 8 1790 229 260 55 0 chrX 158041126 158041199 -8609097 - ORR1B1 LTR MaLR -312 82 6 8 1790 297 368 96 13 chrX 158041340 158041497 -8608799 + LTR33 LTR ERVL 1 170 -345 8 1790 733 359 21 21 chrX 158042382 158042669 -8607627 + B4A SINE B4 5 291 -1 8 1790 645 331 64 32 chrX 158042782 158043032 -8607264 - LTR16A LTR ERVL -40 411 154 8 1790 438 304 110 45 chrX 158043264 158043464 -8606832 + ORR1E LTR MaLR 1 213 -146 8 1790 315 331 12 6 chrX 158043633 158043806 -8606490 + Lx9 LINE L1 7294 7467 -177 8 1790 252 0 0 0 chrX 158043811 158043839 -8606457 + (TC)n Simple_repeat Simple_repeat 1 28 0 8 1790 492 18 0 0 chrX 158043839 158043895 -8606401 + (CA)n Simple_repeat Simple_repeat 1 57 0 9 1790 2029 211 30 76 chrX 158044059 158044472 -8605824 + Lx7 LINE L1 6767 7188 -508 9 1790 1699 26 0 0 chrX 158044472 158044664 -8605632 + B2_Mm1t SINE B2 2 193 0 9 1790 2029 211 30 76 chrX 158044664 158044788 -8605508 + Lx7 LINE L1 7189 7279 -417 9 1790 365 177 38 0 chrX 158044800 158044879 -8605417 + Lx7 LINE L1 7615 7696 0 9 1790 966 227 95 11 chrX 158045479 158045827 -8604469 - L1_Mur1 LINE L1 -5739 1243 867 9 1790 300 325 66 18 chrX 158046329 158046495 -8603801 + L1MC4a LINE L1 7703 7876 -6 9 1790 320 347 92 13 chrX 158046602 158046754 -8603542 - MIRc SINE MIR -45 223 60 9 1790 600 134 0 0 chrX 158046835 158046932 -8603364 + (TCC)n Simple_repeat Simple_repeat 3 99 0 9 1790 703 148 107 36 chrX 158046940 158047080 -8603216 - B1_Mur4 SINE Alu 0 150 1 9 1790 3062 263 52 31 chrX 158047084 158048038 -8602258 + RCHARR1 DNA MER1_type 1 974 0 9 1790 333 109 0 0 chrX 158048437 158048492 -8601804 + (CA)n Simple_repeat Simple_repeat 2 56 0 9 1790 235 272 18 0 chrX 158048754 158048868 -8601428 + GA-rich Low_complexity Low_complexity 2 117 0 1 1790 305 326 36 88 chrX 158050524 158050716 -8599580 - L1ME3 LINE L1 -27 6135 5954 1 1790 1371 68 17 6 chrX 158050892 158051070 -8599226 - B2_Mm2 SINE B2 -14 181 2 1 1790 22 35 0 0 chrX 158051507 158051536 -8598760 + AT_rich Low_complexity Low_complexity 1 29 0 1 1790 189 0 0 0 chrX 158051618 158051639 -8598657 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 1790 1319 272 69 10 chrX 158051988 158052392 -8597904 + Lx8 LINE L1 6750 7177 -296 1 1790 2229 105 60 22 chrX 158052514 158052884 -8597412 + MTB_Mm LTR MaLR 24 407 0 1 1790 212 294 21 0 chrX 158053351 158053408 -8596888 + L2c LINE L2 3250 3324 -63 1 1790 329 343 86 21 chrX 158053945 158054085 -8596211 + MLT1J2 LTR MaLR 100 248 -200 1 1790 226 310 16 65 chrX 158054213 158054337 -8595959 - L1MEf LINE L1 -6040 160 43 1 1790 441 0 0 0 chrX 158054754 158054803 -8595493 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1790 762 161 14 28 chrX 158054891 158055032 -8595264 - B1_Mur2 SINE Alu -2 147 9 1 1790 627 161 0 0 chrX 158055978 158056096 -8594200 + (CA)n Simple_repeat Simple_repeat 2 119 0 1 1790 363 241 46 0 chrX 158056141 158056249 -8594047 - Lx9 LINE L1 -248 7396 7284 1 1790 295 271 114 0 chrX 158056330 158056400 -8593896 - ID4_ SINE ID -3 80 3 1 1790 991 212 50 10 chrX 158056420 158056620 -8593676 + B3 SINE B2 1 208 -8 1 1790 855 317 53 25 chrX 158058706 158059062 -8591234 + MLT1C LTR MaLR 99 464 -3 1 1790 323 259 126 34 chrX 158059120 158059254 -8591042 + MIR SINE MIR 18 155 -121 1 1790 342 0 0 0 chrX 158059276 158059314 -8590982 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1790 635 265 167 24 chrX 158059830 158060081 -8590215 - Lx8 LINE L1 -3 7470 7184 1 1790 249 242 147 29 chrX 158060090 158060192 -8590104 - MER5A1 DNA MER1_type -41 125 12 1 1790 392 309 22 56 chrX 158060393 158060571 -8589725 + MER5B DNA MER1_type 7 178 0 1 1790 35112 29 1 9 chrX 158060685 158065854 -8584442 + L1Md_T LINE L1 465 5586 -297 1 1790 8520 29 1 0 chrX 158065854 158066849 -8583447 + L1Md_T LINE L1 5587 6582 0 1 1790 445 325 100 15 chrX 158066851 158067051 -8583245 + MIR SINE MIR 25 241 -21 1 1790 297 253 134 91 chrX 158067217 158067426 -8582870 + RMER6C LTR ERVK 225 442 -248 1 1790 272 229 88 44 chrX 158067443 158067557 -8582739 + RMER6C LTR ERVK 347 465 -225 1 1790 707 240 41 0 chrX 158067563 158067709 -8582587 + B4A SINE B4 123 274 -18 1 1790 378 0 0 0 chrX 158067766 158067808 -8582488 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1790 326 184 13 0 chrX 158067890 158067966 -8582330 + (TA)n Simple_repeat Simple_repeat 2 78 0 1 1790 848 153 0 7 chrX 158067968 158068119 -8582177 - Lx LINE L1 -6 6648 6499 1 1790 1392 101 59 46 chrX 158068121 158068359 -8581937 + Lx LINE L1 6244 6484 -170 1 1790 381 270 63 84 chrX 158068432 158068622 -8581674 + MTE2a LTR MaLR 1 186 -193 1 1790 1465 267 63 67 chrX 158068502 158068980 -8581316 + MT2A LTR ERVL 58 533 0 1 1790 197 65 32 0 chrX 158069096 158069127 -8581169 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 1790 28 20 0 56 chrX 158069239 158069293 -8581003 + AT_rich Low_complexity Low_complexity 1 51 0 1 1790 913 310 47 0 chrX 158070051 158070309 -8579987 - Tigger7 DNA MER2_type -2220 271 2 1 1790 465 160 266 0 chrX 158070323 158070417 -8579879 - ID_B1 SINE B4 -7 217 99 1 1790 424 274 55 36 chrX 158070417 158070433 -8579863 - PB1D7 SINE Alu -7 113 2 1 1790 537 359 84 10 chrX 158072407 158072705 -8577591 + MLT1J LTR MaLR 53 372 -140 1 1791 745 139 16 0 chrX 158073271 158073400 -8576896 - MER97c DNA MER1_type? -911 179 49 1 1791 408 20 0 0 chrX 158073607 158073656 -8576640 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 1791 198 0 0 0 chrX 158073656 158073678 -8576618 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1791 253 231 77 77 chrX 158073948 158074065 -8576231 - MER53 DNA hAT -1 192 76 1 1791 269 230 73 89 chrX 158074127 158074251 -8576045 - MER53 DNA hAT -71 122 1 1 1791 667 261 44 117 chrX 158074550 158074893 -8575403 - MER33 DNA MER1_type -6 318 1 1 1791 357 306 83 0 chrX 158074998 158075119 -8575177 - MER82 DNA MER2_type -6 647 517 1 1791 1297 276 36 36 chrX 158075166 158075699 -8574597 + MT2A LTR ERVL 1 533 0 1 1791 482 259 13 1 chrX 158075702 158075849 -8574447 - L1MA4 LINE L1 -551 5623 5465 1 1791 740 221 38 24 chrX 158075842 158076051 -8574245 + L1MA4 LINE L1 5719 5930 -370 1 1791 206 217 43 0 chrX 158076088 158076134 -8574162 + (CATG)n Simple_repeat Simple_repeat 3 50 0 1 1791 454 271 199 4 chrX 158076297 158076524 -8573772 - MER82 DNA MER2_type -129 524 254 1 1791 513 0 0 0 chrX 158076539 158076596 -8573700 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1791 31367 83 7 5 chrX 158076655 158082063 -8568233 + L1Md_F2 LINE L1 166 5586 -297 1 1791 7402 77 6 10 chrX 158082064 158083062 -8567234 + L1Md_F2 LINE L1 5588 6581 -1 1 1791 628 290 81 23 chrX 158083130 158083303 -8566993 - MTE2b LTR MaLR -194 185 3 1 1791 379 302 0 0 chrX 158083339 158083425 -8566871 - MER82 DNA MER2_type -567 86 1 1 1791 2181 259 81 10 chrX 158083428 158083572 -8566724 - L1MC3 LINE L1 -15 7770 7611 1 1791 1355 257 59 0 chrX 158083572 158083926 -8566370 - MTE2b LTR MaLR 0 379 5 1 1791 2181 259 81 10 chrX 158083926 158084134 -8566162 - L1MC3 LINE L1 -175 7610 7387 1 1791 183 80 0 0 chrX 158084134 158084159 -8566137 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 1791 2181 259 81 10 chrX 158084159 158084581 -8565715 - L1MC3 LINE L1 -399 7386 6940 1 1791 525 326 41 0 chrX 158084929 158085125 -8565171 - MIR SINE MIR -2 260 57 1 1791 303 240 9 9 chrX 158086654 158086759 -8563537 + L1ME3A LINE L1 6048 6152 -21 1 1791 742 213 35 0 chrX 158087180 158087321 -8562975 - B1_Mur1 SINE Alu 0 149 4 1 1791 3189 171 96 18 chrX 158087889 158088556 -8561740 + RMER19A LTR ERVK 4 722 -15 1 1791 310 313 15 30 chrX 158088556 158088691 -8561605 + MIR SINE MIR 99 231 -31 1 1791 403 327 12 74 chrX 158088779 158088941 -8561355 - B4A SINE B4 0 292 141 1 1791 1377 203 7 25 chrX 158088946 158089229 -8561067 - ORR1C2-int LTR MaLR -1092 278 1 1 1791 1944 180 29 18 chrX 158089229 158089438 -8560858 - ORR1C2 LTR MaLR 0 384 172 1 1791 515 62 0 12 chrX 158089438 158089519 -8560777 + (TAGA)n Simple_repeat Simple_repeat 2 81 0 1 1791 1944 180 29 18 chrX 158089519 158089689 -8560607 - ORR1C2 LTR MaLR -213 171 1 1 1791 433 231 96 5 chrX 158089780 158089967 -8560329 - L1MA6 LINE L1 0 6300 6097 1 1791 407 280 0 17 chrX 158089963 158090083 -8560213 + L1MA5 LINE L1 5801 5918 -382 1 1791 543 319 6 6 chrX 158090564 158090731 -8559565 - LTR16C LTR ERVL -9 480 314 1 1791 23 78 0 0 chrX 158091938 158091989 -8558307 + AT_rich Low_complexity Low_complexity 1 51 0 1 1791 1516 205 144 40 chrX 158092040 158092770 -8557526 + L1_Mur3 LINE L1 287 1092 -6620 1 1791 1670 124 35 0 chrX 158092764 158093023 -8557273 + Lx2 LINE L1 6372 6639 -358 1 1791 1485 95 5 5 chrX 158093028 158093250 -8557046 + Lx2 LINE L1 6776 6997 0 1 1791 207 125 0 0 chrX 158093252 158093292 -8557004 + (A)n Simple_repeat Simple_repeat 1 40 0 1 1791 466 256 232 42 chrX 158093321 158093631 -8556665 + Arthur1 DNA Tip100 3572 3940 -7 1 1791 210 236 0 0 chrX 158093940 158093995 -8556301 + GA-rich Low_complexity Low_complexity 6 60 0 1 1791 3895 92 18 12 chrX 158094162 158094721 -8555575 + L1_Mus3 LINE L1 6077 6638 0 1 1791 354 23 0 0 chrX 158094723 158094766 -8555530 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1791 228 310 37 66 chrX 158095777 158095789 -8554507 + ID_B1 SINE B4 72 91 -201 1 1791 249 130 6 46 chrX 158095789 158095846 -8554450 + B1_Mus1 SINE Alu 2 57 -92 1 1791 228 310 37 66 chrX 158095846 158095897 -8554399 + ID_B1 SINE B4 92 186 -106 1 1791 436 300 9 0 chrX 158095897 158096007 -8554289 + MER45B DNA Tip100 13 123 -917 1 1791 242 382 127 58 chrX 158096295 158096484 -8553812 + MER45C DNA Tip100 488 689 -264 1 1791 354 281 149 53 chrX 158096490 158096593 -8553703 + MER45B DNA Tip100 816 915 -125 1 1791 810 99 0 0 chrX 158096593 158096724 -8553572 + (GA)n Simple_repeat Simple_repeat 2 132 0 1 1791 354 281 149 53 chrX 158096724 158096808 -8553488 + MER45B DNA Tip100 916 1021 -19 1 1791 359 274 24 95 chrX 158096962 158097131 -8553165 - MER63D DNA AcHobo -888 173 17 1 1791 273 57 0 0 chrX 158097530 158097565 -8552731 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1791 1443 253 18 31 chrX 158097605 158097988 -8552308 - MTE2a LTR MaLR 0 379 2 1 1791 373 289 78 0 chrX 158098309 158098399 -8551897 + MIRb SINE MIR 40 136 -132 1 1791 1888 169 65 20 chrX 158098481 158098832 -8551464 - ORR1B2 LTR MaLR 0 367 1 1 1791 401 302 203 77 chrX 158099757 158099951 -8550345 + L2a LINE L2 1976 2180 -1239 1 1791 683 264 146 73 chrX 158099951 158100446 -8549850 + MT2A LTR ERVL 3 533 0 1 1791 401 316 182 68 chrX 158100446 158101186 -8549110 + L2a LINE L2 2181 3318 -108 1 1791 510 280 30 15 chrX 158101267 158101401 -8548895 - B1F2 SINE Alu -6 143 8 1 1791 322 346 30 54 chrX 158101401 158101435 -8548861 - ID_B1 SINE B4 -6 218 55 1 1791 274 314 11 44 chrX 158101414 158101504 -8548792 - MLT1N2 LTR MaLR -388 174 88 1 1791 21 0 0 0 chrX 158101561 158101582 -8548714 + AT_rich Low_complexity Low_complexity 1 21 0 1 1791 296 377 22 0 chrX 158101729 158101867 -8548429 - Tigger13a DNA MER2_type -498 273 133 1 1791 270 274 66 41 chrX 158102206 158102328 -8547968 - MER94 DNA AcHobo -7 127 3 1 1791 515 251 149 6 chrX 158102557 158102725 -8547571 + LTR86C LTR ERVL 57 248 -373 1 1791 664 284 44 13 chrX 158102733 158102962 -8547334 + MLT1F LTR MaLR 330 548 0 1 1791 517 196 44 72 chrX 158103231 158103412 -8546884 - Lx4B LINE L1 0 7058 6883 1 1791 364 321 100 65 chrX 158103439 158103729 -8546567 + L2 LINE L2 2400 2699 -720 1 1791 21 0 0 0 chrX 158103803 158103824 -8546472 + AT_rich Low_complexity Low_complexity 1 21 0 1 1791 1982 274 73 35 chrX 158103824 158104860 -8545436 - L1MD1 LINE L1 -4 6629 5544 1 1791 800 274 37 6 chrX 158104863 158105084 -8545212 + ORR1D1 LTR MaLR 21 250 -109 1 1791 1704 169 15 15 chrX 158105086 158105429 -8544867 - L1_Mur2 LINE L1 -877 5000 4658 1 1791 1639 286 70 17 chrX 158105654 158105959 -8544337 - Lx8 LINE L1 -198 7275 6958 1 1791 528 45 0 0 chrX 158105959 158106026 -8544270 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 1791 1639 286 70 17 chrX 158106026 158106317 -8543979 - Lx8 LINE L1 -516 6957 6647 1 1791 37368 38 2 3 chrX 158106371 158112549 -8537747 - L1Md_T LINE L1 0 6582 413 2 1791 14095 137 82 5 chrX 158112573 158112955 -8537341 - L1_Mur2 LINE L1 -1207 4670 4289 2 1791 217 0 61 0 chrX 158112955 158112988 -8537308 + (TTTG)n Simple_repeat Simple_repeat 4 38 0 2 1791 14095 137 82 5 chrX 158112988 158115099 -8535197 - L1_Mur2 LINE L1 -1589 4288 2059 2 1791 186 103 0 0 chrX 158115099 158115128 -8535168 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1791 14095 137 82 5 chrX 158115128 158115418 -8534878 - L1_Mur2 LINE L1 -3819 2058 1677 2 1791 313 200 0 0 chrX 158115418 158115478 -8534818 + 4.5SRNA scRNA scRNA 5 64 -30 2 1791 1444 289 35 24 chrX 158115490 158115863 -8534433 + MTEa LTR MaLR 3 379 0 2 1791 582 240 216 23 chrX 158115863 158116298 -8533998 - L1MD1 LINE L1 -1430 5107 4589 1 1791 441 0 0 0 chrX 158116511 158116560 -8533736 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1791 2566 257 105 22 chrX 158116696 158118379 -8531917 - L1MD1 LINE L1 -2650 3887 2063 1 1791 390 157 54 11 chrX 158118458 158118551 -8531745 + Lx8 LINE L1 6129 6223 -1473 2 1791 1115 290 138 18 chrX 158118565 158119055 -8531241 + Lx8 LINE L1 6923 7471 -2 2 1791 551 256 158 17 chrX 158119089 158119438 -8530858 - L1MD1 LINE L1 -5048 1585 1188 1 1791 453 288 38 0 chrX 158119468 158119600 -8530696 - L1MD1 LINE L1 -5603 1030 894 1 1791 308 376 45 9 chrX 158119767 158119877 -8530419 - L1MD1 LINE L1 -5848 785 672 1 1791 252 0 0 0 chrX 158119911 158119939 -8530357 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2 1791 366 323 8 8 chrX 158120025 158120159 -8530137 - L1MD1 LINE L1 -6361 272 139 1 1791 522 133 0 0 chrX 158120198 158120311 -8529985 + (TA)n Simple_repeat Simple_repeat 2 114 0 2 1791 459 290 27 27 chrX 158120312 158120461 -8529835 + B1F SINE Alu 1 149 0 2 1791 24 0 0 0 chrX 158120548 158120572 -8529724 + AT_rich Low_complexity Low_complexity 1 24 0 2 1791 368 252 34 67 chrX 158121274 158121423 -8528873 - MIR SINE MIR -1 261 118 2 1791 1228 79 6 6 chrX 158122075 158122254 -8528042 + (TCC)n Simple_repeat Simple_repeat 2 180 0 2 1791 185 211 0 17 chrX 158122255 158122313 -8527983 + CT-rich Low_complexity Low_complexity 1 57 0 2 1791 198 71 0 0 chrX 158123362 158123390 -8526906 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2 1791 1222 274 9 18 chrX 158123578 158123916 -8526380 + Lx8 LINE L1 7038 7372 -101 2 1791 471 283 27 20 chrX 158124253 158124401 -8525895 + MER5A DNA MER1_type 5 153 -36 2 1791 567 0 0 0 chrX 158125273 158125336 -8524960 + (GA)n Simple_repeat Simple_repeat 1 63 0 2 1791 300 263 26 109 chrX 158125471 158125663 -8524633 - Charlie7 DNA MER1_type -15 2597 2422 2 1791 270 306 0 0 chrX 158125720 158125782 -8524514 + polypyrimidine Low_complexity Low_complexity 2 63 0 2 1791 350 273 45 0 chrX 158125792 158125880 -8524416 - PB1D10 SINE Alu -25 92 1 2 1791 264 391 123 29 chrX 158126077 158126385 -8523911 + LTR16C LTR ERVL 153 489 0 2 1791 809 311 101 13 chrX 158126397 158126782 -8523514 - Charlie7 DNA MER1_type -2002 610 192 2 1791 348 211 0 0 chrX 158127168 158127244 -8523052 + A-rich Low_complexity Low_complexity 1 76 0 2 1791 343 221 140 50 chrX 158127327 158127427 -8522869 + LTR88a LTR Gypsy 280 388 -428 2 1791 225 214 42 73 chrX 158127921 158128017 -8522279 - L1MDb LINE L1 -6267 142 50 2 1791 180 176 0 0 chrX 158128976 158129010 -8521286 + (TATG)n Simple_repeat Simple_repeat 3 36 0 2 1791 226 284 103 45 chrX 158129725 158129880 -8520416 - MER97a DNA MER1_type? 0 894 731 2 1791 273 275 76 0 chrX 158129905 158130036 -8520260 + L1MD1 LINE L1 181 321 -6219 2 1791 661 314 31 18 chrX 158130095 158130322 -8519974 + MTEa LTR MaLR 1 230 -149 2 1791 771 220 134 4 chrX 158130329 158130447 -8519849 + Lx9 LINE L1 7363 7509 -135 2 1791 495 33 0 0 chrX 158130447 158130508 -8519788 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 2 1791 771 220 134 4 chrX 158130508 158130635 -8519661 + Lx9 LINE L1 7510 7639 -5 2 1791 546 183 97 14 chrX 158130677 158130821 -8519475 + Lx5 LINE L1 6894 7049 -1 2 1791 593 229 0 8 chrX 158130911 158131030 -8519266 + MTEa LTR MaLR 260 377 -2 2 1791 820 356 65 11 chrX 158131205 158131665 -8518631 + L1MD1 LINE L1 721 1205 -5335 2 1791 21 57 0 0 chrX 158131687 158131722 -8518574 + AT_rich Low_complexity Low_complexity 1 35 0 2 1791 729 227 100 73 chrX 158131722 158131957 -8518339 - Lx5 LINE L1 0 7050 6807 2 1791 248 0 31 0 chrX 158131957 158131989 -8518307 + (CAGG)n Simple_repeat Simple_repeat 1 33 0 2 1791 729 227 100 73 chrX 158131989 158132053 -8518243 - Lx5 LINE L1 -244 6806 6744 2 1791 543 307 144 21 chrX 158132101 158133089 -8517207 + L1MD1 LINE L1 1320 2462 -4171 2 1791 1766 89 126 66 chrX 158133118 158133419 -8516877 - ORR1A2 LTR MaLR -8 319 1 2 1791 30 27 0 0 chrX 158133421 158133458 -8516838 + AT_rich Low_complexity Low_complexity 1 37 0 2 1791 651 292 130 57 chrX 158133472 158134087 -8516209 + L1MD1 LINE L1 2522 3216 -3321 2 1791 1172 62 7 0 chrX 158134087 158134232 -8516064 + B1_Mus1 SINE Alu 2 147 -1 2 1791 651 292 130 57 chrX 158134232 158134472 -8515824 + L1MD1 LINE L1 3217 3439 -3098 2 1791 1834 119 21 5 chrX 158134473 158134773 -8515523 + ORR1A2 LTR MaLR 54 384 0 2 1791 226 317 38 16 chrX 158134786 158134969 -8515327 + L1MD1 LINE L1 4824 5010 -1527 2 1791 345 303 53 76 chrX 158134970 158135018 -8515278 + B4 SINE B4 40 84 -208 2 1791 511 186 0 15 chrX 158135018 158135119 -8515177 + PB1D9 SINE Alu 1 96 -21 2 1791 687 108 0 0 chrX 158135140 158135242 -8515054 + (GGGA)n Simple_repeat Simple_repeat 3 104 0 2 1791 541 282 89 4 chrX 158135242 158135512 -8514784 + L1MD1 LINE L1 5047 5339 -1198 2 1791 1034 251 244 16 chrX 158135518 158136062 -8514234 + L1MD1 LINE L1 5540 6215 -418 2 1791 324 0 0 0 chrX 158136062 158136098 -8514198 + (TAA)n Simple_repeat Simple_repeat 1 36 0 2 1791 1034 265 50 68 chrX 158136098 158136352 -8513944 + L1MD1 LINE L1 6216 6465 -168 2 1791 432 0 0 0 chrX 158136352 158136400 -8513896 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1791 1034 265 50 68 chrX 158136400 158136579 -8513717 + L1MD1 LINE L1 6466 6631 -2 2 1791 3405 191 41 51 chrX 158136734 158137677 -8512619 - L1_Rod LINE L1 -458 5389 4456 2 1791 22 56 0 0 chrX 158137797 158137833 -8512463 + AT_rich Low_complexity Low_complexity 1 36 0 2 1791 198 91 0 0 chrX 158138751 158138784 -8511512 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 2 1791 2008 159 108 16 chrX 158139145 158139523 -8510773 + MTC LTR MaLR 9 421 0 2 1791 234 257 14 41 chrX 158139747 158139820 -8510476 + tRNA-Ala-GCY_ tRNA tRNA 1 71 -4 2 1791 550 258 123 19 chrX 158139955 158140109 -8510187 + B3 SINE B2 47 216 0 2 1791 248 338 0 0 chrX 158140751 158140822 -8509474 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 1791 258 262 16 0 chrX 158140848 158140909 -8509387 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1791 7664 78 8 20 chrX 158142084 158143541 -8506755 - L1_Mus3 LINE L1 0 6638 5219 2 1791 38136 4 9 9 chrX 158144113 158145763 -8504533 - L1Md_A LINE L1 0 6582 4917 2 1791 228 183 46 77 chrX 158145763 158145828 -8504468 + RMER20A LTR ERVK 186 248 -268 2 1791 38136 4 9 9 chrX 158145828 158150689 -8499607 - L1Md_A LINE L1 0 4916 7 2 1791 351 314 84 22 chrX 158151642 158151821 -8498475 + LTR16C LTR ERVL 275 464 -25 2 1791 225 0 0 0 chrX 158152497 158152522 -8497774 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1791 33 73 0 0 chrX 158152675 158152743 -8497553 + AT_rich Low_complexity Low_complexity 1 68 0 2 1791 317 273 199 7 chrX 158153677 158153828 -8496468 + ORSL DNA Tip100 96 275 0 2 1791 270 0 0 0 chrX 158154110 158154140 -8496156 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 2 1791 180 315 0 0 chrX 158154320 158154374 -8495922 + L2c LINE L2 3334 3387 0 2 1791 459 130 0 0 chrX 158154652 158154729 -8495567 + (CA)n Simple_repeat Simple_repeat 2 78 0 2 1791 432 0 0 0 chrX 158154729 158154776 -8495520 + (GA)n Simple_repeat Simple_repeat 2 49 0 2 1791 186 192 0 0 chrX 158154891 158154943 -8495353 + C-rich Low_complexity Low_complexity 3 54 0 2 1791 211 220 0 0 chrX 158154987 158155037 -8495259 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1791 26 64 0 0 chrX 158155274 158155321 -8494975 + GC_rich Low_complexity Low_complexity 1 47 0 2 1791 22 35 0 0 chrX 158155378 158155407 -8494889 + GC_rich Low_complexity Low_complexity 1 29 0 2 1791 207 188 0 0 chrX 158157765 158157813 -8492483 + A-rich Low_complexity Low_complexity 1 48 0 2 1791 232 301 40 14 chrX 158158661 158158735 -8491561 - MIRc SINE MIR -70 198 123 2 1791 747 302 44 12 chrX 158159622 158159844 -8490452 - MLT1A0 LTR MaLR 0 467 144 2 1791 369 0 0 0 chrX 158159844 158159885 -8490411 + (TCTG)n Simple_repeat Simple_repeat 3 43 0 2 1791 780 233 41 52 chrX 158159885 158160127 -8490169 - MLT1A0 LTR MaLR -209 258 1 2 1791 724 258 119 12 chrX 158160314 158160645 -8489651 + MER33 DNA MER1_type 1 324 0 2 1791 273 29 0 0 chrX 158161993 158162027 -8488269 + (CCA)n Simple_repeat Simple_repeat 3 36 0 2 1791 591 15 0 0 chrX 158162430 158162498 -8487798 + (GA)n Simple_repeat Simple_repeat 1 68 0 2 1791 515 291 7 7 chrX 158162841 158162976 -8487320 - MER20 DNA MER1_type -5 214 80 2 1791 182 37 37 0 chrX 158165221 158165248 -8485048 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 2 1791 405 0 0 0 chrX 158165502 158165547 -8484749 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 1791 342 0 0 0 chrX 158165547 158165584 -8484712 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1791 688 256 78 41 chrX 158165667 158165936 -8484360 - B4 SINE B4 -10 282 4 2 1791 699 211 117 28 chrX 158165965 158166145 -8484151 - B3A SINE B2 0 198 3 2 1791 213 298 6 24 chrX 158167002 158167100 -8483196 + GA-rich Low_complexity Low_complexity 1 96 0 2 1791 242 321 0 0 chrX 158167449 158167558 -8482738 - MIRb SINE MIR -95 173 65 2 1791 258 32 0 0 chrX 158169391 158169422 -8480874 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1791 299 239 15 0 chrX 158170037 158170104 -8480192 - MER81 DNA AcHobo -34 80 13 2 1791 315 0 0 0 chrX 158170469 158170504 -8479792 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1791 271 261 51 29 chrX 158171125 158171263 -8479033 - L1ME3A LINE L1 -27 6146 6006 2 1791 460 284 9 0 chrX 158171344 158171460 -8478836 - B1F SINE Alu -32 117 1 2 1791 609 52 0 0 chrX 158173441 158173518 -8476778 + (TCCC)n Simple_repeat Simple_repeat 1 77 0 2 1791 311 232 12 24 chrX 158173729 158173813 -8476483 + L2a LINE L2 3344 3426 0 2 1791 261 0 0 0 chrX 158174496 158174525 -8475771 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 2 1791 472 315 104 92 chrX 158175181 158175615 -8474681 + MLT1J1 LTR MaLR 2 440 -4 2 1791 272 244 11 0 chrX 158176006 158176096 -8474200 + CT-rich Low_complexity Low_complexity 2 92 0 2 1791 347 293 56 28 chrX 158176096 158176240 -8474056 - B1F SINE Alu -1 148 1 2 1791 297 358 0 9 chrX 158176252 158176362 -8473934 - PB1D10 SINE Alu -7 110 2 2 1791 293 205 25 25 chrX 158176513 158176593 -8473703 - L1M5 LINE L1 -366 5758 5679 2 1791 1126 224 220 9 chrX 158176622 158176968 -8473328 - MTD LTR MaLR 0 419 1 2 1791 210 71 0 0 chrX 158177534 158177562 -8472734 + (ATG)n Simple_repeat Simple_repeat 3 30 0 2 1791 423 0 0 0 chrX 158177670 158177717 -8472579 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1791 1246 269 55 8 chrX 158178344 158178744 -8471552 - L1ME2 LINE L1 -81 6083 5665 2 1791 333 294 0 11 chrX 158180009 158180102 -8470194 + CT-rich Low_complexity Low_complexity 2 93 0 3 1791 440 252 0 65 chrX 158180107 158180230 -8470066 - ID_B1 SINE B4 -2 222 108 3 1791 369 0 0 0 chrX 158180305 158180346 -8469950 + (TA)n Simple_repeat Simple_repeat 1 41 0 3 1791 423 138 0 0 chrX 158182079 158182166 -8468130 + (TC)n Simple_repeat Simple_repeat 1 87 0 3 1791 501 329 25 51 chrX 158182429 158182743 -8467553 - L1ME3 LINE L1 -21 6141 5836 3 1791 414 0 0 0 chrX 158184493 158184539 -8465757 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1791 261 0 0 0 chrX 158184539 158184567 -8465729 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 1791 982 230 142 25 chrX 158186376 158186657 -8463639 + MTD LTR MaLR 11 324 -95 3 1791 631 309 59 71 chrX 158186719 158187043 -8463253 - ORR1E LTR MaLR -34 325 6 3 1791 305 315 32 58 chrX 158188276 158188431 -8461865 - MER20 DNA MER1_type -13 206 56 3 1791 405 322 101 14 chrX 158188739 158188956 -8461340 + MIR SINE MIR 3 238 -24 3 1791 186 397 41 0 chrX 158189515 158189636 -8460660 - L2b LINE L2 -12 3363 3238 3 1791 258 329 82 19 chrX 158189885 158190043 -8460253 - L2b LINE L2 -447 2972 2805 3 1791 473 237 92 82 chrX 158190045 158190092 -8460204 - B2_Mm2 SINE B2 -9 186 125 3 1791 648 38 0 0 chrX 158190092 158190171 -8460125 + (GA)n Simple_repeat Simple_repeat 1 79 0 3 1791 695 235 7 0 chrX 158190171 158190307 -8459989 - B3A SINE B2 -61 137 1 3 1791 236 258 128 38 chrX 158190314 158190447 -8459849 - L2b LINE L2 -1311 2108 1964 3 1791 453 19 0 0 chrX 158190702 158190756 -8459540 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 1791 262 208 299 0 chrX 158192206 158192283 -8458013 - L1M5 LINE L1 -461 5663 5564 3 1791 281 348 38 19 chrX 158192579 158192737 -8457559 - MER5B DNA MER1_type -8 170 10 3 1791 198 320 48 73 chrX 158193067 158193232 -8457064 - MIR SINE MIR -25 237 77 3 1791 300 279 0 12 chrX 158195261 158195341 -8454955 - MIRb SINE MIR -102 166 88 3 1791 599 168 0 8 chrX 158195684 158195804 -8454492 + CT-rich Low_complexity Low_complexity 4 122 0 3 1791 484 353 6 7 chrX 158196414 158196642 -8453654 - L1ME1 LINE L1 -358 5882 5657 3 1791 279 93 0 0 chrX 158196777 158196820 -8453476 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1791 228 276 52 31 chrX 158196863 158196960 -8453336 - B4 SINE B4 -16 276 178 3 1791 3279 51 5 2 chrX 158197014 158197409 -8452887 - MTA_Mm LTR MaLR 0 396 1 3 1791 8835 55 3 20 chrX 158197409 158198526 -8451770 - MTA_Mm-int LTR MaLR 0 1098 1 3 1791 3450 30 5 0 chrX 158198526 158198920 -8451376 - MTA_Mm LTR MaLR 0 396 1 3 1791 2560 56 0 12 chrX 158198920 158199265 -8451031 - MTA_Mm LTR MaLR -55 341 1 3 1791 317 259 23 12 chrX 158199281 158199367 -8450929 - B4A SINE B4 -204 88 2 3 1791 378 0 0 0 chrX 158199718 158199760 -8450536 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1791 603 60 0 0 chrX 158199760 158199843 -8450453 + (GA)n Simple_repeat Simple_repeat 2 85 0 3 1791 749 261 34 29 chrX 158199948 158200157 -8450139 - ID_B1 SINE B4 -10 214 5 3 1791 465 307 113 4 chrX 158200292 158200472 -8449824 - MLT1J1 LTR MaLR -253 195 3 3 1791 231 260 66 42 chrX 158201303 158201414 -8448882 + MIRb SINE MIR 153 268 0 3 1791 246 32 0 0 chrX 158201975 158202006 -8448290 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1791 519 95 0 0 chrX 158202319 158202393 -8447903 + (CAT)n Simple_repeat Simple_repeat 1 74 0 3 1791 549 313 73 64 chrX 158202919 158203233 -8447063 + LTR16C LTR ERVL 86 402 -87 3 1792 651 140 40 0 chrX 158204129 158204229 -8446067 - Lx4A LINE L1 -452 6606 6503 3 1792 1559 124 0 0 chrX 158204230 158204455 -8445841 - Lx2A1 LINE L1 -1138 5870 5646 3 1792 558 168 55 24 chrX 158204456 158204581 -8445715 + Lx4B LINE L1 6778 6951 -107 3 1792 273 373 53 0 chrX 158205078 158205287 -8445009 + Tigger16a DNA Tigger 664 883 -50 3 1792 303 361 6 12 chrX 158205430 158205590 -8444706 + (ATG)n Simple_repeat Simple_repeat 2 160 0 3 1792 224 316 82 21 chrX 158205680 158205777 -8444519 - MIRb SINE MIR -115 153 51 3 1792 300 75 0 0 chrX 158206142 158206182 -8444114 - U2 snRNA snRNA -148 40 1 3 1792 223 342 26 0 chrX 158207203 158207279 -8443017 + MIR3 SINE MIR 81 158 -50 3 1792 189 0 0 0 chrX 158207403 158207424 -8442872 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1792 196 289 59 52 chrX 158208517 158208652 -8441644 + MER5B DNA MER1_type 38 173 -5 3 1792 916 148 227 0 chrX 158208712 158208888 -8441408 - B3 SINE B2 0 216 1 3 1792 417 264 8 16 chrX 158208920 158209043 -8441253 - MER5A1 DNA MER1_type -33 133 12 3 1792 1232 183 14 5 chrX 158210705 158210925 -8439371 + URR1A DNA MER1_type 5 226 0 3 1792 181 349 25 84 chrX 158213650 158213769 -8436527 + L2c LINE L2 3276 3387 0 3 1792 315 122 0 0 chrX 158217789 158217838 -8432458 + (A)n Simple_repeat Simple_repeat 1 49 0 3 1792 210 282 106 0 chrX 158217864 158217949 -8432347 + PB1D10 SINE Alu 2 95 -22 3 1792 183 42 0 0 chrX 158217950 158217974 -8432322 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 3 1792 541 236 7 212 chrX 158218181 158218455 -8431841 + MER20 DNA MER1_type 1 218 -1 3 1792 554 0 0 15 chrX 158220124 158220191 -8430105 + (GAAA)n Simple_repeat Simple_repeat 3 68 0 3 1792 251 276 0 17 chrX 158220549 158220608 -8429688 + polypurine Low_complexity Low_complexity 2 59 0 3 1792 184 287 31 31 chrX 158220625 158220718 -8429578 - MIRm SINE MIR -66 202 110 3 1792 279 286 0 0 chrX 158220795 158220879 -8429417 - MamRep434 DNA TcMar 0 426 343 3 1792 377 308 99 76 chrX 158221707 158221918 -8428378 - MER20 DNA MER1_type -3 216 1 3 1792 1367 155 0 13 chrX 158221932 158222161 -8428135 - URR1A DNA MER1_type 0 226 1 3 1792 207 100 0 0 chrX 158222567 158222597 -8427699 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1792 599 137 7 30 chrX 158222840 158222975 -8427321 + L1MB8 LINE L1 6042 6173 -5 3 1792 21 0 0 0 chrX 158222975 158222996 -8427300 + AT_rich Low_complexity Low_complexity 1 21 0 3 1792 307 302 201 22 chrX 158224090 158224358 -8425938 - Tigger15a DNA TcMar -63 652 337 3 1792 555 62 0 0 chrX 158224361 158224441 -8425855 + (TG)n Simple_repeat Simple_repeat 1 80 0 3 1792 324 102 0 0 chrX 158225031 158225080 -8425216 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 1792 183 184 0 0 chrX 158225477 158225515 -8424781 + C-rich Low_complexity Low_complexity 5 42 0 3 1792 180 278 69 69 chrX 158225999 158226115 -8424181 + L2c LINE L2 3044 3159 -228 3 1792 484 324 0 19 chrX 158226442 158226587 -8423709 - ID_B1 SINE B4 -7 217 81 3 1792 449 292 61 30 chrX 158226660 158226858 -8423438 - Charlie7a DNA MER1_type -41 231 28 3 1792 274 337 70 4 chrX 158227039 158227179 -8423117 + MIRc SINE MIR 12 157 -105 3 1792 248 315 18 44 chrX 158229210 158229323 -8420973 + PB1D9 SINE Alu 3 112 -8 3 1792 224 131 30 76 chrX 158229482 158229548 -8420748 + T-rich Low_complexity Low_complexity 3 65 0 3 1792 3034 122 39 14 chrX 158230355 158230864 -8419432 + Lx4A LINE L1 6380 6901 -157 3 1792 7444 67 4 1 chrX 158230862 158232198 -8418098 + L1_Mus1 LINE L1 5224 6563 -4 3 1792 545 323 132 0 chrX 158232397 158232617 -8417679 - MLT1F2 LTR MaLR -294 266 18 3 1792 8462 129 23 9 chrX 158233341 158235084 -8415212 - Lx4A LINE L1 -2 7056 5279 3 1792 6473 91 8 2 chrX 158235076 158236015 -8414281 - L1_Mus4 LINE L1 -7 6629 5685 3 1792 6334 83 79 16 chrX 158235988 158237021 -8413275 - Lx4A LINE L1 -2064 1850 901 3 1792 5804 65 0 8 chrX 158237021 158237761 -8412535 - L1Md_F2 LINE L1 -13 6569 5836 3 1792 6334 67 148 28 chrX 158237761 158238296 -8412000 - Lx4A LINE L1 -5738 900 217 3 1792 1383 165 44 63 chrX 158239762 158240125 -8410171 + L1_Mur3 LINE L1 1700 2055 -3825 3 1792 1794 121 49 37 chrX 158240508 158240835 -8409461 - Lx LINE L1 -1 6653 6323 3 1792 2274 68 0 3 chrX 158240835 158241175 -8409121 + L1_Mus4 LINE L1 5548 5886 -750 3 1792 259 238 16 0 chrX 158243657 158243720 -8406576 + MuRRS-int LTR ERV1 1964 2027 -5579 3 1792 414 0 0 0 chrX 158243896 158243942 -8406354 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1792 295 319 78 37 chrX 158244361 158244767 -8405529 + MuRRS-int LTR ERV1 2449 3176 -4602 3 1792 253 301 0 0 chrX 158244977 158245060 -8405236 + MuRRS-int LTR ERV1 3925 4007 -4200 3 1792 271 347 22 28 chrX 158245129 158245310 -8404986 + MuRRS4-int LTR ERV1 2227 2406 -2657 3 1792 348 301 112 79 chrX 158245612 158246115 -8404181 + RLTR16 LTR ERVK 1 567 -125 3 1792 547 257 31 65 chrX 158246418 158246647 -8403649 + RMER3D-int LTR ERVK 140 360 -2482 3 1792 1523 167 18 49 chrX 158246801 158247186 -8403110 + RMER3D-int LTR ERVK 1014 1386 -1456 3 1792 685 229 51 28 chrX 158247186 158247477 -8402819 + MYSERV16_I-int LTR ERVK 277 544 -1782 3 1792 779 248 104 64 chrX 158247483 158247811 -8402485 + MYSERV16_I-int LTR ERVK 639 979 -1347 3 1792 1577 111 52 26 chrX 158247819 158248088 -8402208 - L1_Mus3 LINE L1 -6 6632 6357 3 1792 2490 89 38 3 chrX 158248090 158248462 -8401834 + L1_Mus3 LINE L1 5974 6358 -280 3 1792 3140 199 72 38 chrX 158248464 158249547 -8400749 + MYSERV16_I-int LTR ERVK 1364 2821 -21 3 1792 366 321 84 53 chrX 158249600 158249939 -8400357 + RLTR16 LTR ERVK 32 426 -266 3 1792 22 0 0 0 chrX 158250173 158250195 -8400101 + AT_rich Low_complexity Low_complexity 1 22 0 3 1792 260 359 37 21 chrX 158250322 158250510 -8399786 + MuRRS4-int LTR ERV1 2511 2701 -2616 3 1792 1271 176 16 102 chrX 158250528 158250832 -8399464 + RLTR31A_Mm LTR ERVK 1 278 -306 3 1792 277 209 123 9 chrX 158251476 158251582 -8398714 + Lx7 LINE L1 7559 7676 -20 3 1792 22 35 0 0 chrX 158252218 158252247 -8398049 + AT_rich Low_complexity Low_complexity 1 29 0 3 1792 25 51 0 0 chrX 158252297 158252336 -8397960 + AT_rich Low_complexity Low_complexity 1 39 0 3 1792 22 80 0 0 chrX 158253445 158253495 -8396801 + AT_rich Low_complexity Low_complexity 1 50 0 3 1792 276 298 27 27 chrX 158253966 158254149 -8396147 + L1M3 LINE L1 4136 4318 -1822 3 1792 775 223 38 0 chrX 158254151 158254308 -8395988 - 7SLRNA srpRNA srpRNA -112 202 40 3 1792 823 265 120 4 chrX 158254321 158254579 -8395717 + Lx8 LINE L1 6608 6895 -578 3 1792 1257 64 64 0 chrX 158254658 158254831 -8395465 + L1_Mus2 LINE L1 6382 6565 -1 3 1792 325 238 13 154 chrX 158258259 158258408 -8391888 - RMER1A Other Other -890 140 13 3 1792 2498 205 96 2 chrX 158258441 158258897 -8391399 + RMER1B Other Other 442 947 -119 4 1792 207 0 0 0 chrX 158258897 158258920 -8391376 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1792 2498 205 96 2 chrX 158258920 158259034 -8391262 + RMER1B Other Other 948 1065 -1 4 1792 2010 195 31 7 chrX 158260191 158260609 -8389687 + Lx9 LINE L1 7038 7465 -179 4 1792 408 97 0 0 chrX 158260615 158260677 -8389619 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 1792 718 168 17 11 chrX 158260732 158260907 -8389389 + Lx9 LINE L1 7458 7633 -11 4 1792 278 310 45 22 chrX 158260986 158261075 -8389221 - B1F1 SINE Alu 0 149 59 4 1792 2327 247 100 97 chrX 158261076 158261909 -8388387 + RMER13A LTR ERVK 1 835 -25 4 1792 2469 37 0 3 chrX 158262219 158262516 -8387780 - L1_Mus1 LINE L1 -6 6561 6266 4 1792 309 20 60 0 chrX 158262587 158262637 -8387659 + (TC)n Simple_repeat Simple_repeat 1 53 0 4 1792 216 0 0 0 chrX 158262638 158262662 -8387634 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1792 21 0 0 0 chrX 158263395 158263416 -8386880 + AT_rich Low_complexity Low_complexity 1 21 0 4 1792 314 287 55 18 chrX 158263981 158264091 -8386205 + PB1D10 SINE Alu 4 117 0 4 1792 185 0 40 0 chrX 158264236 158264261 -8386035 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1792 4155 46 10 0 chrX 158264352 158264850 -8385446 + RLTR1C LTR ERV1 1 503 0 4 1792 331 335 63 25 chrX 158265266 158265425 -8384871 + L1ME3B LINE L1 5549 5713 -466 4 1792 365 240 13 13 chrX 158265745 158265821 -8384475 - ID4 SINE ID -4 79 4 4 1792 225 245 102 0 chrX 158265781 158265830 -8384466 - ZP3AR Satellite Satellite -127 85 32 4 1792 522 169 0 33 chrX 158265876 158266059 -8384237 + (CTG)n Simple_repeat Simple_repeat 1 177 0 4 1792 230 313 0 0 chrX 158266797 158266896 -8383400 + L1ME3B LINE L1 5845 5943 -297 4 1792 191 74 93 0 chrX 158269230 158269284 -8381012 + (TTATA)n Simple_repeat Simple_repeat 1 59 0 4 1792 220 253 33 0 chrX 158269294 158269385 -8380911 + (TA)n Simple_repeat Simple_repeat 2 95 0 4 1792 1074 64 35 0 chrX 158269398 158269539 -8380757 - B1_Mm SINE Alu 0 147 2 4 1792 226 180 50 0 chrX 158269579 158269679 -8380617 + (TA)n Simple_repeat Simple_repeat 2 106 0 4 1792 240 111 0 0 chrX 158272528 158272564 -8377732 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1792 366 61 0 0 chrX 158272700 158272749 -8377547 + (TC)n Simple_repeat Simple_repeat 1 49 0 4 1792 185 0 40 0 chrX 158276650 158276675 -8373621 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1792 217 370 0 90 chrX 158277254 158277343 -8372953 + ID4 SINE ID 1 81 -2 4 1792 468 0 0 0 chrX 158282720 158282772 -8367524 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1792 22 35 0 0 chrX 158283998 158284027 -8366269 + AT_rich Low_complexity Low_complexity 1 29 0 4 1792 378 157 0 0 chrX 158284123 158284206 -8366090 + CT-rich Low_complexity Low_complexity 2 84 0 4 1792 387 0 0 0 chrX 158284206 158284249 -8366047 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1792 553 144 8 8 chrX 158286574 158286693 -8363603 + GA-rich Low_complexity Low_complexity 2 120 0 4 1792 1205 42 24 0 chrX 158286915 158287083 -8363213 + (TTTC)n Simple_repeat Simple_repeat 2 173 0 4 1792 273 294 231 41 chrX 158287601 158287796 -8362500 + MIR SINE MIR 15 246 -16 4 1792 189 0 0 0 chrX 158287877 158287898 -8362398 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1792 423 0 0 0 chrX 158287898 158287944 -8362352 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 1792 1069 245 72 86 chrX 158287994 158288284 -8362012 - B4 SINE B4 -1 291 6 4 1792 353 364 45 0 chrX 158288461 158288593 -8361703 + MER45A DNA Tip100 41 178 0 4 1792 330 336 0 46 chrX 158288664 158288773 -8361523 - B1F1 SINE Alu -36 113 10 4 1792 518 319 48 6 chrX 158288802 158288969 -8361327 - RMER30 DNA MER1_type -19 183 10 4 1792 447 19 0 0 chrX 158289073 158289125 -8361171 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1792 308 254 107 78 chrX 158292970 158293279 -8357017 + L1M5 LINE L1 5488 5805 -374 4 1792 486 350 38 0 chrX 158293302 158293459 -8356837 + RSINE1 SINE B4 3 165 0 4 1792 216 294 0 68 chrX 158293544 158293617 -8356679 + BC1_Mm scRNA scRNA 18 85 -67 4 1792 438 20 0 0 chrX 158293641 158293692 -8356604 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1792 763 270 10 15 chrX 158294642 158294909 -8355387 - L1MD2 LINE L1 -133 6046 5782 4 1792 465 277 182 17 chrX 158295131 158295307 -8354989 + LTR50 LTR ERVL 1 205 -590 4 1792 203 162 0 0 chrX 158295695 158295732 -8354564 + GA-rich Low_complexity Low_complexity 2 38 0 4 1792 780 224 3 107 chrX 158295809 158296099 -8354197 + MERVL_2A-int LTR ERVL 5502 5761 0 4 1792 2144 253 6 27 chrX 158296099 158296596 -8353700 + MT2A LTR ERVL 1 488 -45 4 1792 288 0 0 0 chrX 158296596 158296628 -8353668 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1792 2144 253 6 27 chrX 158296628 158296657 -8353639 + MT2A LTR ERVL 489 516 -17 4 1792 1168 143 108 0 chrX 158296658 158296861 -8353435 + URR1A DNA MER1_type 1 225 -1 4 1792 1111 264 85 37 chrX 158296871 158297486 -8352810 - L1MC4a LINE L1 -179 7703 7060 4 1792 661 295 50 45 chrX 158297511 158297593 -8352703 + B4A SINE B4 5 87 -205 4 1792 221 331 79 86 chrX 158297593 158297732 -8352564 + B1F2 SINE Alu 1 138 -11 4 1792 1126 280 68 10 chrX 158297786 158298288 -8352008 - L1MC4a LINE L1 -848 7034 6504 4 1792 701 250 9 75 chrX 158298568 158298780 -8351516 - B3A SINE B2 0 198 1 4 1792 1469 60 0 6 chrX 158299043 158299226 -8351070 - B2_Mm2 SINE B2 -13 182 1 4 1792 259 179 30 0 chrX 158299624 158299691 -8350605 + CT-rich Low_complexity Low_complexity 4 72 0 4 1792 948 241 35 30 chrX 158300767 158300985 -8349311 - L1MC4a LINE L1 -1556 6326 6112 4 1792 195 129 0 0 chrX 158300985 158301016 -8349280 + (CAG)n Simple_repeat Simple_repeat 2 32 0 4 1792 948 241 35 30 chrX 158301016 158301135 -8349161 - L1MC4a LINE L1 -1771 6111 5987 4 1792 1574 250 64 19 chrX 158301139 158301559 -8348737 + Tigger9b DNA MER2_type 1 439 -185 4 1792 296 326 0 55 chrX 158301566 158301712 -8348584 + B1_Mus2 SINE Alu 2 139 -8 4 1792 663 90 0 0 chrX 158301781 158301881 -8348415 + (CA)n Simple_repeat Simple_repeat 2 101 0 4 1792 364 344 101 44 chrX 158301950 158302494 -8347802 - L1MC4 LINE L1 -1608 4606 4026 4 1792 319 294 12 0 chrX 158302799 158302884 -8347412 - L1MC4 LINE L1 -3515 2699 2614 4 1792 326 296 145 56 chrX 158303025 158303772 -8346524 - L1MC4 LINE L1 -3829 2386 1574 4 1792 376 298 16 52 chrX 158304206 158304397 -8345899 - L1MC4 LINE L1 -6018 197 14 4 1792 321 336 17 60 chrX 158305511 158305628 -8344668 - MER119 DNA MER1_type -471 112 1 4 1792 554 304 108 65 chrX 158305679 158306048 -8344248 - L1ME4a LINE L1 -201 5923 5539 4 1792 207 240 0 51 chrX 158306166 158306245 -8344051 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 4 1792 330 87 0 0 chrX 158306444 158306490 -8343806 + (CCA)n Simple_repeat Simple_repeat 1 46 0 4 1792 229 249 0 0 chrX 158306491 158306537 -8343759 - MIR SINE MIR -5 263 214 4 1792 1093 185 83 0 chrX 158307668 158307873 -8342423 - URR1A DNA MER1_type 0 226 5 4 1792 3432 25 5 0 chrX 158308238 158308632 -8341664 - MTA_Mm LTR MaLR 0 396 1 4 1792 684 35 0 0 chrX 158309176 158309263 -8341033 + (TC)n Simple_repeat Simple_repeat 2 88 0 4 1792 1099 132 6 0 chrX 158310265 158310447 -8339849 + Lx4A LINE L1 6294 6476 -582 4 1792 207 0 0 0 chrX 158310471 158310494 -8339802 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1792 185 393 124 23 chrX 158311222 158311399 -8338897 + L2b LINE L2 3148 3342 -33 4 1792 378 0 0 0 chrX 158311664 158311706 -8338590 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1792 493 315 69 52 chrX 158312826 158313117 -8337179 + MER20B DNA MER1_type 488 783 0 4 1792 332 262 24 24 chrX 158314438 158314520 -8335776 + ID4 SINE ID 2 83 0 4 1792 225 318 15 0 chrX 158314592 158314658 -8335638 + MER3 DNA MER1_type 7 73 -136 4 1792 229 236 40 27 chrX 158314689 158314763 -8335533 + MER3 DNA MER1_type 82 156 -53 4 1792 231 36 0 0 chrX 158315414 158315442 -8334854 + (TC)n Simple_repeat Simple_repeat 2 29 0 4 1792 207 0 0 0 chrX 158315442 158315465 -8334831 + (TGGG)n Simple_repeat Simple_repeat 3 25 0 4 1792 6615 36 0 0 chrX 158316790 158317571 -8332725 - L1Md_T LINE L1 -2 6580 5800 4 1792 768 32 0 0 chrX 158317571 158317665 -8332631 + L1_Mm LINE L1 5515 5608 -275 4 1792 672 294 164 20 chrX 158317665 158317915 -8332381 + B4A SINE B4 5 290 -2 4 1792 238 341 84 12 chrX 158318168 158318251 -8332045 + MLT1E LTR MaLR 10 98 -582 4 1792 917 337 131 13 chrX 158318283 158318656 -8331640 + MLT1E LTR MaLR 171 587 -66 4 1792 262 350 0 0 chrX 158318677 158318757 -8331539 - ID2 SINE ID -2 81 2 4 1792 190 313 159 57 chrX 158319198 158319374 -8330922 - MIRb SINE MIR -61 207 14 4 1792 489 76 0 0 chrX 158319757 158319823 -8330473 + (TG)n Simple_repeat Simple_repeat 1 66 0 4 1792 557 207 18 9 chrX 158319836 158319948 -8330348 + B1F SINE Alu 28 140 -9 4 1792 237 279 57 105 chrX 158319851 158319975 -8330321 + B4A SINE B4 128 245 -47 4 1792 961 252 5 19 chrX 158320170 158320384 -8329912 + B3 SINE B2 1 211 -5 4 1792 2680 164 40 45 chrX 158320405 158320432 -8329864 + RLTR11A2 LTR ERVK 1 24 -503 4 1792 3196 43 5 5 chrX 158320432 158320826 -8329470 - MTA_Mm LTR MaLR -2 394 1 4 1792 2680 164 40 45 chrX 158320826 158321328 -8328968 + RLTR11A2 LTR ERVK 25 527 0 4 1792 279 260 96 0 chrX 158322918 158322991 -8327305 + B4 SINE B4 201 280 -12 4 1792 450 0 0 0 chrX 158323064 158323114 -8327182 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1792 615 288 84 25 chrX 158323538 158323777 -8326519 + MER112 DNA MER1_type 6 258 -3 4 1792 839 264 105 40 chrX 158325209 158325533 -8324763 - ORR1E LTR MaLR -5 354 10 4 1792 1936 69 38 8 chrX 158325552 158325816 -8324480 - L1Md_F2 LINE L1 0 6582 6311 4 1792 2379 63 0 0 chrX 158325818 158326137 -8324159 + L1_Mm LINE L1 3316 3634 -2249 4 1792 1464 158 84 191 chrX 158326311 158326741 -8323555 + ORR1C2 LTR MaLR 1 384 0 4 1792 300 53 0 0 chrX 158326938 158326976 -8323320 + (TA)n Simple_repeat Simple_repeat 1 38 0 4 1792 597 28 0 0 chrX 158327312 158327383 -8322913 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 4 1792 294 214 43 0 chrX 158329234 158329304 -8320992 - MADE2 DNA Mariner -5 75 3 4 1792 1736 285 41 19 chrX 158330108 158330920 -8319376 + L1M2 LINE L1 4269 5098 -1045 4 1792 425 259 11 11 chrX 158330957 158331047 -8319249 + ID_B1 SINE B4 11 100 -124 5 1792 464 365 0 26 chrX 158331393 158331545 -8318751 + RSINE1 SINE B4 8 155 -10 5 1792 1023 141 134 10 chrX 158332298 158332499 -8317797 - URR1A DNA MER1_type 0 226 1 5 1792 459 327 45 18 chrX 158333598 158333822 -8316474 + LTR16C LTR ERVL 257 486 -3 5 1792 573 15 0 0 chrX 158334184 158334250 -8316046 + (GGA)n Simple_repeat Simple_repeat 1 66 0 5 1792 364 331 58 0 chrX 158334265 158334386 -8315910 - B1F2 SINE Alu -21 128 1 5 1792 444 312 38 23 chrX 158334279 158334410 -8315886 - ID_B1 SINE B4 -32 192 60 5 1793 230 288 27 0 chrX 158335332 158335405 -8314891 + MLT1J2 LTR MaLR 109 183 -265 5 1793 252 0 0 0 chrX 158335568 158335596 -8314700 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 5 1793 648 300 8 12 chrX 158336201 158336451 -8313845 + L1ME2 LINE L1 3432 3680 -2466 5 1793 348 301 9 17 chrX 158336434 158336549 -8313747 + L1MD LINE L1 3991 4104 -2042 5 1793 228 322 43 32 chrX 158336726 158336819 -8313477 + ID_B1 SINE B4 92 185 -39 5 1793 216 86 0 0 chrX 158336839 158336874 -8313422 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1793 396 272 64 45 chrX 158336888 158337154 -8313142 + L1ME2 LINE L1 4349 4619 -1527 5 1793 321 235 171 117 chrX 158337148 158337370 -8312926 - RMER1C Other Other -3 1339 1106 5 1793 865 273 58 21 chrX 158337240 158337483 -8312813 - Lx8 LINE L1 -121 7352 7101 5 1793 852 314 100 17 chrX 158337499 158338021 -8312275 + L1ME2 LINE L1 4616 5180 -966 5 1793 315 276 72 49 chrX 158338102 158338281 -8312015 + L1ME2 LINE L1 5625 5773 -671 5 1793 492 269 46 8 chrX 158338281 158338412 -8311884 - B1F SINE Alu -12 137 2 5 1793 397 303 78 123 chrX 158338412 158338680 -8311616 + L1ME2 LINE L1 5774 6052 -392 5 1793 297 128 0 0 chrX 158339537 158339584 -8310712 + (CCA)n Simple_repeat Simple_repeat 1 47 0 5 1793 773 349 74 19 chrX 158339827 158340137 -8310159 - LTR16A LTR ERVL -30 421 95 5 1793 1273 252 178 32 chrX 158340484 158341049 -8309247 + Lx7 LINE L1 6678 7331 -365 5 1793 468 0 0 0 chrX 158341049 158341101 -8309195 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 5 1793 1273 262 67 48 chrX 158341101 158341142 -8309154 + Lx7 LINE L1 7332 7367 -329 5 1793 793 243 6 17 chrX 158341301 158341481 -8308815 - B3A SINE B2 -16 182 5 5 1793 414 127 0 0 chrX 158342349 158342420 -8307876 + (GGGA)n Simple_repeat Simple_repeat 4 74 0 5 1793 547 265 48 42 chrX 158342668 158342857 -8307439 + MIR SINE MIR 37 226 -36 5 1793 327 151 75 75 chrX 158343346 158343439 -8306857 + MLT1J1 LTR MaLR 50 142 -302 5 1793 207 0 0 0 chrX 158345872 158345895 -8304401 + (TAA)n Simple_repeat Simple_repeat 2 24 0 5 1793 21 57 0 0 chrX 158346322 158346357 -8303939 + GC_rich Low_complexity Low_complexity 1 35 0 5 1793 337 383 57 14 chrX 158349025 158349237 -8301059 + MIRb SINE MIR 29 249 -19 5 1793 391 290 118 37 chrX 158349574 158349735 -8300561 - MER58A DNA MER1_type -50 174 1 5 1793 393 244 0 0 chrX 158351689 158351771 -8298525 - ID4 SINE ID 0 83 2 5 1793 21 0 0 0 chrX 158352340 158352361 -8297935 + AT_rich Low_complexity Low_complexity 1 21 0 5 1793 439 344 17 6 chrX 158352662 158352843 -8297453 - MIRb SINE MIR -70 198 16 5 1793 378 316 89 64 chrX 158353034 158353393 -8296903 + MLT1H LTR MaLR 4 403 -146 5 1793 370 335 45 62 chrX 158353462 158353752 -8296544 + RMER10A LTR ERVL 12 296 -146 5 1793 2215 142 5 16 chrX 158354422 158354795 -8295501 + Lx2 LINE L1 6629 6997 0 5 1793 273 163 0 0 chrX 158355906 158355955 -8294341 + A-rich Low_complexity Low_complexity 1 49 0 5 1793 233 375 19 9 chrX 158355955 158356060 -8294236 + MamRep1161 DNA TcMar 738 843 -114 5 1793 386 330 79 26 chrX 158356899 158357089 -8293207 + MIR SINE MIR 51 250 -12 5 1793 1349 209 161 26 chrX 158357227 158357576 -8292720 - MTD LTR MaLR 0 419 24 5 1793 190 320 13 0 chrX 158358144 158358222 -8292074 - MIRb SINE MIR -12 256 178 5 1793 192 77 0 0 chrX 158359042 158359068 -8291228 + (GAAAA)n Simple_repeat Simple_repeat 1 26 0 5 1793 585 0 0 0 chrX 158359898 158359963 -8290333 + (GA)n Simple_repeat Simple_repeat 1 65 0 5 1793 363 349 108 13 chrX 158360935 158361167 -8289129 - MIRb SINE MIR -11 257 4 5 1793 421 244 34 17 chrX 158361294 158361411 -8288885 - B1_Mur1 SINE Alu -2 147 29 5 1793 410 236 17 76 chrX 158362764 158362883 -8287413 - MER5B DNA MER1_type 0 178 67 5 1793 225 290 10 31 chrX 158363367 158363463 -8286833 + A-rich Low_complexity Low_complexity 6 99 0 5 1793 370 207 0 44 chrX 158364611 158364702 -8285594 + MER5A1 DNA MER1_type 1 87 -79 5 1793 419 63 16 0 chrX 158365080 158365143 -8285153 + (CCA)n Simple_repeat Simple_repeat 2 65 0 5 1793 291 351 23 34 chrX 158365523 158365564 -8284732 + ID_B1 SINE B4 49 223 -1 5 1793 529 287 15 0 chrX 158365564 158365700 -8284596 + B1_Mur1 SINE Alu 11 148 -1 5 1793 1096 179 114 12 chrX 158365701 158365955 -8284341 + Lx9 LINE L1 7361 7640 -4 5 1793 517 165 0 40 chrX 158366228 158366329 -8283967 - RLTR13D1 LTR ERVK 0 806 710 5 1793 308 296 92 0 chrX 158367079 158367177 -8283119 - LTR16A1 LTR ERVL -335 121 15 5 1793 357 172 62 0 chrX 158367981 158368045 -8282251 + ID4_ SINE ID 2 69 -14 5 1793 477 0 0 0 chrX 158368366 158368419 -8281877 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1793 223 369 30 6 chrX 158368696 158368865 -8281431 - MIR SINE MIR 0 262 90 5 1793 222 222 0 0 chrX 158369092 158369146 -8281150 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 1793 501 225 83 48 chrX 158369292 158369460 -8280836 + MTEa LTR MaLR 203 376 -3 5 1793 258 254 18 0 chrX 158370340 158370454 -8279842 + (TATAA)n Simple_repeat Simple_repeat 4 119 0 5 1793 252 185 47 47 chrX 158370455 158370540 -8279756 + Lx9 LINE L1 7560 7644 0 5 1793 393 74 0 0 chrX 158370599 158370653 -8279643 - ORR1A4 LTR MaLR -8 321 268 5 1793 829 159 18 12 chrX 158370656 158370821 -8279475 + ORR1A4 LTR MaLR 1 166 -163 5 1793 991 128 0 0 chrX 158370813 158370977 -8279319 - ORR1A4-int LTR MaLR -1799 164 1 5 1793 1656 148 48 13 chrX 158370981 158371290 -8279006 - ORR1A4 LTR MaLR -8 321 2 5 1793 900 264 167 21 chrX 158372711 158373094 -8277202 + L1ME3A LINE L1 5709 6147 -26 5 1793 300 182 0 96 chrX 158373301 158373374 -8276922 - ID4 SINE ID -3 80 15 5 1793 227 250 61 20 chrX 158373454 158373552 -8276744 + MER102c DNA MER1_type 226 327 -4 5 1793 237 301 68 34 chrX 158373724 158373872 -8276424 - MLT1A1 LTR MaLR 0 408 256 5 1793 225 274 95 116 chrX 158373904 158374094 -8276202 - MLT1A1 LTR MaLR -222 186 1 5 1793 266 161 23 0 chrX 158375406 158375493 -8274803 + (CATATA)n Simple_repeat Simple_repeat 2 90 0 5 1793 797 263 86 5 chrX 158376580 158376609 -8273687 - B3 SINE B2 -6 210 166 5 1793 180 77 0 0 chrX 158376609 158376635 -8273661 + (TATG)n Simple_repeat Simple_repeat 2 27 0 5 1793 797 263 86 5 chrX 158376635 158376792 -8273504 - B3 SINE B2 -51 165 9 5 1793 269 40 40 0 chrX 158377121 158377171 -8273125 + B2_Mm1t SINE B2 134 185 -8 5 1793 526 273 57 28 chrX 158377526 158377703 -8272593 - MLT1J2 LTR MaLR -8 440 259 5 1793 277 293 137 20 chrX 158377717 158377890 -8272406 - MLT1J2 LTR MaLR -238 206 17 5 1793 279 0 0 0 chrX 158379419 158379450 -8270846 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 1793 333 0 0 0 chrX 158381688 158381725 -8268571 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 5 1793 234 378 6 18 chrX 158382660 158382802 -8267494 + MIRb SINE MIR 113 255 -7 5 1793 21 0 0 0 chrX 158383167 158383188 -8267108 + AT_rich Low_complexity Low_complexity 1 21 0 5 1793 682 312 68 34 chrX 158383594 158383976 -8266320 - L1MA4 LINE L1 -328 5972 5578 5 1793 1217 93 36 10 chrX 158383976 158384171 -8266125 + Lx3_Mus LINE L1 6809 7008 -1 5 1793 443 246 6 0 chrX 158384231 158384351 -8265945 - L1_Rod LINE L1 -585 5295 5139 5 1793 1077 0 15 8 chrX 158384696 158384830 -8265466 + (CA)n Simple_repeat Simple_repeat 1 135 0 5 1793 254 95 24 0 chrX 158384865 158384907 -8265389 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 5 1793 1336 261 3 3 chrX 158385356 158385675 -8264621 + Helitron2Na_Mam RC Helitron? 2 320 -4 5 1793 3753 0 0 0 chrX 158386246 158386653 -8263643 - L1Md_T LINE L1 -1 6581 6175 5 1793 3125 12 0 0 chrX 158386653 158386999 -8263297 + L1Md_T LINE L1 5826 6171 -411 5 1793 183 310 40 65 chrX 158387465 158387589 -8262707 + L2c LINE L2 3070 3190 -197 5 1793 237 254 60 0 chrX 158387803 158387870 -8262426 + MamRep38 DNA hAT 1 71 -224 5 1793 378 0 0 0 chrX 158388194 158388236 -8262060 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1793 279 352 64 48 chrX 158388814 158389002 -8261294 + MIRb SINE MIR 72 262 -6 5 1793 421 341 127 7 chrX 158389475 158389750 -8260546 + LTR87 LTR ERVL? 23 330 -294 5 1793 1209 142 42 17 chrX 158389770 158390006 -8260290 + LTR87 LTR ERVL? 383 624 0 5 1793 195 184 0 0 chrX 158391006 158391044 -8259252 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 5 1793 2932 261 54 49 chrX 158391280 158392095 -8258201 + RCHARR1 DNA MER1_type 3 850 -124 5 1793 4479 48 4 2 chrX 158392095 158392638 -8257658 + L1Md_F2 LINE L1 6039 6582 0 5 1793 2932 261 54 49 chrX 158392638 158392740 -8257556 + RCHARR1 DNA MER1_type 851 930 -44 5 1793 1312 92 16 0 chrX 158392740 158392925 -8257371 + B2_Mm1t SINE B2 3 190 -3 5 1793 2932 261 54 49 chrX 158392925 158392970 -8257326 + RCHARR1 DNA MER1_type 931 971 -3 5 1793 197 102 50 17 chrX 158393251 158393311 -8256985 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 1793 255 31 0 0 chrX 158393496 158393528 -8256768 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1793 241 323 0 0 chrX 158394812 158394877 -8255419 + C-rich Low_complexity Low_complexity 1 65 0 5 1793 196 308 15 0 chrX 158395052 158395117 -8255179 + MIRc SINE MIR 83 148 -120 5 1793 207 0 0 0 chrX 158396844 158396867 -8253429 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1793 2036 123 0 0 chrX 158397444 158397762 -8252534 - ORR1A3 LTR MaLR -8 318 1 5 1793 289 235 75 0 chrX 158397768 158397872 -8252424 + L1MC3 LINE L1 7677 7764 -21 5 1793 914 273 130 33 chrX 158397879 158398313 -8251983 + L1ME3A LINE L1 5450 5927 -246 5 1793 396 0 0 0 chrX 158398313 158398357 -8251939 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1793 914 273 130 33 chrX 158398357 158398566 -8251730 + L1ME3A LINE L1 5928 6155 -18 5 1793 1135 50 21 0 chrX 158398951 158399091 -8251205 - B1_Mus2 SINE Alu -3 144 2 5 1793 238 241 24 24 chrX 158400150 158400235 -8250061 + MLT1J1 LTR MaLR 1 85 -359 6 1793 827 292 101 53 chrX 158402040 158402456 -8247840 + LTR16A1 LTR ERVL 1 436 -20 6 1793 198 143 0 0 chrX 158403205 158403240 -8247056 + (TTTTC)n Simple_repeat Simple_repeat 4 38 0 6 1793 639 150 150 0 chrX 158403259 158403379 -8246917 - B1_Mur4 SINE Alu -7 143 6 6 1793 333 0 0 0 chrX 158403382 158403419 -8246877 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 6 1793 409 295 212 13 chrX 158403768 158403919 -8246377 + B3A SINE B2 2 182 -16 6 1793 518 275 42 7 chrX 158403972 158404115 -8246181 + B1F1 SINE Alu 2 149 0 6 1793 961 202 54 29 chrX 158404226 158404430 -8245866 + B3 SINE B2 2 210 -6 6 1793 384 256 0 0 chrX 158406292 158406374 -8243922 + ID4 SINE ID 2 83 0 6 1793 1231 290 138 16 chrX 158407175 158407659 -8242637 - Lx8 LINE L1 -451 7022 6480 6 1793 1011 229 24 0 chrX 158408419 158408629 -8241667 + B3 SINE B2 2 216 0 6 1793 21 0 0 0 chrX 158408785 158408806 -8241490 + AT_rich Low_complexity Low_complexity 1 21 0 6 1793 270 286 25 25 chrX 158409480 158409559 -8240737 - ID4_ SINE ID -4 79 1 6 1793 382 276 29 0 chrX 158409764 158409869 -8240427 - ID_B1 SINE B4 -2 222 115 6 1793 1126 95 0 20 chrX 158410518 158410669 -8239627 - B1_Mus1 SINE Alu 0 148 1 6 1793 208 131 21 21 chrX 158412053 158412100 -8238196 + GA-rich Low_complexity Low_complexity 4 50 0 6 1793 302 207 315 22 chrX 158412191 158412280 -8238016 - PB1 SINE Alu -2 125 6 6 1793 214 306 105 24 chrX 158412860 158412984 -8237312 + L2a LINE L2 3282 3415 -11 6 1793 202 258 76 0 chrX 158413291 158413357 -8236939 - MIR SINE MIR -110 152 82 6 1793 303 104 0 0 chrX 158413831 158413879 -8236417 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1793 409 244 14 1 chrX 158414047 158414156 -8236140 + MLT1A0 LTR MaLR 207 344 -46 6 1793 422 292 47 66 chrX 158415576 158415833 -8234463 + L2a LINE L2 3158 3409 -17 6 1793 232 320 0 104 chrX 158415954 158416069 -8234227 + ID_B1 SINE B4 78 180 -44 6 1793 347 234 9 113 chrX 158415969 158416075 -8234221 + PB1D10 SINE Alu 11 105 -12 6 1793 230 228 53 0 chrX 158416872 158416929 -8233367 + GA-rich Low_complexity Low_complexity 3 62 0 6 1793 201 292 0 0 chrX 158417423 158417471 -8232825 + (CATATA)n Simple_repeat Simple_repeat 3 50 0 6 1793 303 238 0 0 chrX 158417520 158417583 -8232713 + ID4 SINE ID 5 67 -16 6 1793 321 306 74 86 chrX 158417818 158418061 -8232235 - MIR SINE MIR -11 251 12 6 1793 262 312 12 12 chrX 158420615 158420696 -8229600 - B4A SINE B4 -204 88 8 6 1793 706 156 6 44 chrX 158420820 158420862 -8229434 + polypurine Low_complexity Low_complexity 2 39 0 6 1793 867 186 0 0 chrX 158420862 158421007 -8229289 + B1_Mur2 SINE Alu 5 149 0 6 1793 706 156 6 44 chrX 158421007 158421145 -8229151 + GA-rich Low_complexity Low_complexity 40 175 0 6 1793 288 264 23 30 chrX 158422623 158422727 -8227569 + T-rich Low_complexity Low_complexity 33 136 0 6 1793 276 30 0 0 chrX 158422727 158422760 -8227536 + (TCCC)n Simple_repeat Simple_repeat 1 33 0 6 1793 288 264 23 30 chrX 158422760 158422788 -8227508 + T-rich Low_complexity Low_complexity 6 32 0 6 1793 289 356 24 12 chrX 158424363 158424528 -8225768 + Tigger12c DNA MER2_type 76 242 -492 6 1793 311 319 149 40 chrX 158424568 158424991 -8225305 - MLT1H2 LTR MaLR -23 526 83 6 1793 274 338 46 13 chrX 158425036 158425189 -8225107 + Tigger12c DNA MER2_type 538 695 -39 6 1793 389 301 104 45 chrX 158425544 158425746 -8224550 + MER20 DNA MER1_type 1 214 -5 6 1793 208 53 26 26 chrX 158427244 158427283 -8223013 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 1793 1006 83 14 0 chrX 158427287 158427431 -8222865 - B1_Mm SINE Alu 0 147 2 6 1793 594 338 109 22 chrX 158427431 158427844 -8222452 + LTR16C LTR ERVL 39 487 -2 6 1793 192 77 0 0 chrX 158428229 158428255 -8222041 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1793 450 49 0 0 chrX 158428346 158428407 -8221889 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 1793 434 325 54 6 chrX 158429415 158429582 -8220714 + MER5A DNA MER1_type 9 183 -6 6 1793 408 20 0 0 chrX 158429596 158429645 -8220651 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1793 320 339 149 0 chrX 158432101 158432269 -8218027 + MIRb SINE MIR 67 259 -9 6 1793 278 292 81 61 chrX 158432815 158433012 -8217284 - L2a LINE L2 0 3426 3226 6 1793 414 329 246 41 chrX 158433064 158433430 -8216866 - L2a LINE L2 -295 3131 2691 6 1793 2721 264 99 10 chrX 158433948 158434753 -8215543 - Lx8 LINE L1 0 7473 6597 6 1793 199 191 14 14 chrX 158434962 158435031 -8215265 + GA-rich Low_complexity Low_complexity 3 71 0 6 1793 528 199 80 27 chrX 158436733 158436883 -8213413 - Lx4B LINE L1 -4 7054 6897 6 1793 297 284 121 55 chrX 158437820 158438055 -8212241 + MLT1H LTR MaLR 221 450 -39 6 1793 866 223 112 0 chrX 158438202 158438399 -8211897 + Tigger5 DNA MER2_type 1 219 -2187 6 1793 203 254 63 0 chrX 158438606 158438678 -8211618 - MIRm SINE MIR -113 163 76 6 1793 1049 123 176 66 chrX 158438752 158438996 -8211300 - RLTRETN_Mm LTR ERVK 0 322 52 6 1793 567 0 0 0 chrX 158439000 158439063 -8211233 + (TC)n Simple_repeat Simple_repeat 1 63 0 6 1793 279 0 0 0 chrX 158439063 158439093 -8211203 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1793 2527 150 0 5 chrX 158440776 158441184 -8209112 - MTC LTR MaLR -15 406 1 6 1793 428 366 111 31 chrX 158441476 158441826 -8208470 + MLT1J2 LTR MaLR 69 446 -2 6 1793 259 329 54 27 chrX 158441832 158441979 -8208317 + MamSINE1 SINE tRNA 98 248 -42 6 1793 210 192 0 0 chrX 158442261 158442313 -8207983 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1793 674 286 140 20 chrX 158442321 158442571 -8207725 - B4 SINE B4 -12 280 1 6 1793 545 191 51 17 chrX 158442668 158442785 -8207511 - B1_Mur1 SINE Alu -7 142 22 6 1793 440 157 126 0 chrX 158443459 158443570 -8206726 + B1_Mur2 SINE Alu 11 144 -5 6 1793 313 286 31 0 chrX 158443581 158443679 -8206617 + MER5A DNA MER1_type 89 189 0 6 1793 260 378 10 0 chrX 158443834 158443932 -8206364 - MIRb SINE MIR -120 148 50 6 1793 250 178 0 52 chrX 158444830 158444907 -8205389 + GA-rich Low_complexity Low_complexity 4 76 0 6 1793 356 273 107 8 chrX 158445388 158445510 -8204786 + MIR SINE MIR 32 165 -97 6 1793 253 200 83 0 chrX 158446254 158446314 -8203982 - MLT1I LTR MaLR 0 411 347 6 1793 374 325 113 61 chrX 158446593 158447036 -8203260 - L2a LINE L2 -37 3389 2924 6 1793 234 0 0 0 chrX 158448622 158448648 -8201648 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1793 405 0 0 0 chrX 158449160 158449205 -8201091 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 1793 363 417 42 0 chrX 158450163 158450355 -8199941 - LTR16C LTR ERVL -154 335 136 6 1793 1064 122 200 11 chrX 158451057 158451247 -8199049 + URR1A DNA MER1_type 1 226 0 6 1793 207 0 0 0 chrX 158451297 158451320 -8198976 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 1793 450 0 0 0 chrX 158451320 158451369 -8198927 + (GA)n Simple_repeat Simple_repeat 2 51 0 6 1793 2144 109 44 6 chrX 158452054 158452369 -8197927 + Lx4A LINE L1 6730 7056 -2 6 1793 295 307 74 48 chrX 158452552 158452702 -8197594 - MIRb SINE MIR -100 168 16 6 1793 615 292 15 49 chrX 158453423 158453628 -8196668 + B3A SINE B2 1 198 -18 6 1793 314 327 68 50 chrX 158454094 158454255 -8196041 + RSINE1 SINE B4 2 165 0 6 1793 207 0 0 0 chrX 158455325 158455348 -8194948 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 6 1793 779 57 9 0 chrX 158455998 158456103 -8194193 + (GGAA)n Simple_repeat Simple_repeat 4 109 0 6 1793 350 239 84 72 chrX 158456706 158456942 -8193354 + L2a LINE L2 2908 3139 -287 6 1793 392 282 66 44 chrX 158457929 158458066 -8192230 - MER20 DNA MER1_type -63 156 17 6 1793 808 174 256 0 chrX 158459154 158459326 -8190970 - B3 SINE B2 0 216 1 6 1793 194 253 91 26 chrX 158459385 158459462 -8190834 - MIR SINE MIR 0 262 181 6 1793 606 307 68 32 chrX 158459603 158459882 -8190414 + MLT1H LTR MaLR 14 302 -247 6 1793 646 167 0 13 chrX 158460614 158460772 -8189524 + (TG)n Simple_repeat Simple_repeat 1 156 0 6 1793 525 285 7 14 chrX 158460802 158460948 -8189348 - RSINE1 SINE B4 -13 152 8 6 1793 255 61 0 0 chrX 158461191 158461224 -8189072 + (TTA)n Simple_repeat Simple_repeat 3 35 0 6 1793 755 308 98 41 chrX 158461525 158461682 -8188614 + L1MC4 LINE L1 7129 7321 -721 6 1793 231 36 0 0 chrX 158461682 158461710 -8188586 + (TA)n Simple_repeat Simple_repeat 2 29 0 6 1793 755 308 98 41 chrX 158461710 158462164 -8188132 + L1MC4 LINE L1 7322 7774 -268 6 1793 354 247 0 12 chrX 158462588 158462670 -8187626 - URR1B DNA MER1_type -143 82 2 6 1793 340 270 0 0 chrX 158463661 158463735 -8186561 + ID4_ SINE ID 2 75 -8 6 1793 880 262 15 5 chrX 158464409 158464486 -8185810 + ID SINE ID 3 81 -143 6 1793 303 324 71 14 chrX 158464486 158464627 -8185669 + B1F2 SINE Alu 1 149 0 6 1793 586 185 168 0 chrX 158464636 158464755 -8185541 + B1F1 SINE Alu 1 139 -10 6 1793 273 312 22 59 chrX 158465370 158465506 -8184790 - MER5A1 DNA MER1_type -35 131 1 6 1793 498 307 0 0 chrX 158465622 158465762 -8184534 - ID_B1 SINE B4 -4 220 81 6 1794 414 0 0 0 chrX 158467491 158467537 -8182759 + (TC)n Simple_repeat Simple_repeat 2 47 0 6 1794 378 0 0 0 chrX 158467537 158467578 -8182718 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1794 378 259 47 28 chrX 158467690 158467808 -8182488 - B4 SINE B4 -46 246 128 7 1794 248 297 0 26 chrX 158467822 158467898 -8182398 - ID2 SINE ID -9 74 1 7 1794 186 133 0 0 chrX 158467905 158467935 -8182361 + (TAG)n Simple_repeat Simple_repeat 2 31 0 7 1794 568 244 9 0 chrX 158467991 158468106 -8182190 - ID_B1 SINE B4 -21 203 88 7 1794 264 325 16 49 chrX 158468192 158468315 -8181981 + MER5B DNA MER1_type 57 175 -3 7 1794 591 85 0 0 chrX 158469538 158469620 -8180676 + (CA)n Simple_repeat Simple_repeat 1 82 0 7 1794 455 0 18 0 chrX 158469990 158470045 -8180251 + (TC)n Simple_repeat Simple_repeat 1 56 0 7 1794 582 286 54 40 chrX 158470106 158470328 -8179968 + MTEb LTR MaLR 155 379 0 7 1794 349 206 90 36 chrX 158470526 158470637 -8179659 + MER33 DNA MER1_type 11 127 -197 7 1794 654 157 9 0 chrX 158470638 158470746 -8179550 + B1_Mur3 SINE Alu 34 142 -7 7 1794 437 186 70 21 chrX 158470760 158470903 -8179393 + MER33 DNA MER1_type 91 240 -84 7 1794 389 197 14 0 chrX 158471082 158471153 -8179143 - ID4_ SINE ID -10 73 2 7 1794 211 259 97 44 chrX 158471469 158471582 -8178714 + MIR SINE MIR 110 228 -34 7 1794 257 357 21 7 chrX 158471894 158472038 -8178258 - Tigger14a DNA MER2_type -78 246 101 7 1794 450 36 0 0 chrX 158472370 158472426 -8177870 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 1794 590 250 78 11 chrX 158472524 158472722 -8177574 - MER20 DNA MER1_type -3 216 1 7 1794 257 306 0 133 chrX 158472800 158472928 -8177368 - MER5A DNA MER1_type -75 114 4 7 1794 516 349 48 48 chrX 158473639 158473680 -8176616 - LTR16C LTR ERVL -21 468 434 7 1794 1599 287 65 25 chrX 158473680 158473849 -8176447 + Tigger9b DNA MER2_type 5 181 -443 7 1794 306 0 0 0 chrX 158473849 158473883 -8176413 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 1794 531 0 0 0 chrX 158473883 158473941 -8176355 + (GA)n Simple_repeat Simple_repeat 2 60 0 7 1794 1599 287 65 25 chrX 158473941 158474366 -8175930 + Tigger9b DNA MER2_type 182 623 -1 7 1794 516 349 48 48 chrX 158474366 158474634 -8175662 - LTR16C LTR ERVL -56 433 159 7 1794 208 274 124 71 chrX 158476663 158476832 -8173464 + MIRc SINE MIR 19 196 -72 7 1794 634 169 275 66 chrX 158476852 158477125 -8173171 + Lx9 LINE L1 7315 7644 0 7 1794 337 228 22 0 chrX 158477159 158477251 -8173045 + Lx2B LINE L1 6905 6998 -2 7 1794 891 266 110 83 chrX 158477574 158477730 -8172566 + L1MB5 LINE L1 5644 5793 -381 7 1794 660 246 133 12 chrX 158477730 158477903 -8172393 - B3A SINE B2 -2 196 3 7 1794 891 266 110 83 chrX 158477903 158478128 -8172168 + L1MB5 LINE L1 5794 6026 -148 7 1794 432 0 0 0 chrX 158478128 158478176 -8172120 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1794 891 266 110 83 chrX 158478176 158478264 -8172032 + L1MB5 LINE L1 6027 6127 -47 7 1794 4001 68 0 27 chrX 158479884 158480410 -8169886 + L1Md_F2 LINE L1 6069 6580 -2 7 1794 1162 42 21 0 chrX 158480983 158481126 -8169170 + B1_Mus2 SINE Alu 2 147 0 7 1794 181 53 0 73 chrX 158481142 158481183 -8169113 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 7 1794 216 97 0 0 chrX 158481266 158481297 -8168999 + (GA)n Simple_repeat Simple_repeat 2 32 0 7 1794 462 36 0 0 chrX 158482349 158482405 -8167891 + (GGA)n Simple_repeat Simple_repeat 3 58 0 7 1794 340 250 88 59 chrX 158482994 158483164 -8167132 - MIRb SINE MIR -58 210 36 7 1794 210 171 0 24 chrX 158483442 158483484 -8166812 + CT-rich Low_complexity Low_complexity 2 42 0 7 1794 421 277 19 69 chrX 158483812 158483971 -8166325 + RSINE1 SINE B4 4 154 -11 7 1794 303 28 0 0 chrX 158483999 158484035 -8166261 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1794 1407 133 23 0 chrX 158485812 158486030 -8164266 + URR1B DNA MER1_type 1 223 -2 7 1794 506 351 47 31 chrX 158486092 158486209 -8164087 + L1ME3B LINE L1 5526 5655 -585 7 1794 588 233 10 107 chrX 158486209 158486406 -8163890 - MER5B DNA MER1_type 0 178 1 7 1794 506 351 47 31 chrX 158486406 158486606 -8163690 + L1ME3B LINE L1 5656 5848 -392 7 1794 279 0 0 0 chrX 158487579 158487610 -8162686 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1794 364 360 54 47 chrX 158488257 158488554 -8161742 + LTR33A LTR ERVL 222 520 0 7 1794 207 0 0 0 chrX 158489116 158489139 -8161157 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1794 183 42 0 0 chrX 158489945 158489969 -8160327 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 1794 234 0 0 0 chrX 158490202 158490228 -8160068 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 1794 678 25 0 0 chrX 158490228 158490307 -8159989 + (GA)n Simple_repeat Simple_repeat 2 81 0 7 1794 389 271 32 8 chrX 158490965 158491088 -8159208 - MER5A1 DNA MER1_type 0 166 41 7 1794 243 275 73 32 chrX 158491117 158491241 -8159055 + Charlie4a DNA MER1_type 107 235 -273 7 1794 378 0 0 0 chrX 158492656 158492698 -8157598 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1794 248 296 43 24 chrX 158492766 158492916 -8157380 + MIRc SINE MIR 35 190 -72 7 1794 435 236 22 0 chrX 158492917 158493006 -8157290 - ID_B1 SINE B4 -132 92 2 7 1794 663 242 35 20 chrX 158495043 158495245 -8155051 + RMER15 LTR ERVL 357 561 -14 7 1794 204 125 0 0 chrX 158495269 158495301 -8154995 + (TTCTCC)n Simple_repeat Simple_repeat 4 35 0 7 1794 407 308 44 19 chrX 158495326 158495485 -8154811 - RSINE1 SINE B4 0 165 3 7 1794 252 143 0 0 chrX 158495496 158495552 -8154744 + (TCC)n Simple_repeat Simple_repeat 1 56 0 7 1794 1226 265 76 30 chrX 158495615 158496078 -8154218 + MER74A LTR ERVL 75 558 0 7 1794 298 254 0 0 chrX 158496337 158496396 -8153900 - MER63A DNA AcHobo -148 62 4 7 1794 564 282 0 8 chrX 158496477 158496609 -8153687 - ID_B1 SINE B4 -7 217 87 7 1794 182 327 116 39 chrX 158496803 158497010 -8153286 + MIRb SINE MIR 17 239 -29 7 1794 518 313 82 10 chrX 158497043 158497346 -8152950 + Charlie4a DNA MER1_type 77 401 -107 7 1794 442 318 28 39 chrX 158499253 158499433 -8150863 + MLT1H LTR MaLR 3 180 -369 7 1794 185 388 59 47 chrX 158499594 158499848 -8150448 + L2 LINE L2 2825 3081 -338 7 1794 274 286 115 9 chrX 158500022 158500135 -8150161 + L2a LINE L2 3298 3422 -4 1 1794 342 216 236 22 chrX 158500178 158500294 -8150002 + B3A SINE B2 2 163 -53 2 1794 38 22 0 0 chrX 158500318 158500363 -8149933 + AT_rich Low_complexity Low_complexity 1 45 0 3 1794 272 316 52 99 chrX 158500451 158500623 -8149673 + LTR16C LTR ERVL 100 263 -226 4 1794 341 98 33 0 chrX 158501735 158501796 -8148500 + Lx4A LINE L1 6993 7055 -3 5 1794 30 27 0 0 chrX 158501799 158501836 -8148460 + AT_rich Low_complexity Low_complexity 1 37 0 6 1794 3458 171 28 41 chrX 158502397 158502977 -8147319 + RMER15 LTR ERVL 1 572 -3 7 1794 468 361 89 40 chrX 158502980 158503407 -8146889 + LTR16A LTR ERVL 4 451 0 8 1794 767 268 78 20 chrX 158503723 158504013 -8146283 - Charlie5 DNA MER1_type -15 2609 2300 9 1794 306 0 0 0 chrX 158504013 158504047 -8146249 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1794 767 268 78 20 chrX 158504047 158504103 -8146193 - Charlie5 DNA MER1_type -325 2299 2243 9 1794 323 240 90 58 chrX 158504079 158504234 -8146062 - MER3 DNA MER1_type -9 200 41 1 1794 248 266 16 0 chrX 158505254 158505318 -8144978 + CT-rich Low_complexity Low_complexity 6 70 0 1 1794 387 0 0 0 chrX 158505785 158505828 -8144468 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1794 504 48 0 0 chrX 158505828 158505890 -8144406 + (GA)n Simple_repeat Simple_repeat 1 63 0 1 1794 217 362 0 68 chrX 158505896 158505970 -8144326 - ID4 SINE ID -13 70 2 1 1794 1371 283 133 72 chrX 158506269 158507361 -8142935 + L1MA4 LINE L1 4082 5239 -904 1 1794 1055 0 0 0 chrX 158507388 158507495 -8142801 + U6 snRNA snRNA 1 107 0 1 1794 16317 17 0 1 chrX 158507495 158509337 -8140959 + L1Md_A LINE L1 3746 5586 -297 1 1794 8938 34 1 0 chrX 158509337 158510332 -8139964 + L1Md_A LINE L1 5587 6582 0 1 1794 189 180 0 0 chrX 158510354 158510404 -8139892 + A-rich Low_complexity Low_complexity 1 50 0 1 1794 198 0 0 0 chrX 158510453 158510475 -8139821 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1794 1511 265 47 61 chrX 158510492 158510571 -8139725 + L1MA4 LINE L1 5298 5377 -923 1 1794 1604 45 85 0 chrX 158510571 158510771 -8139525 + L1_Mus1 LINE L1 6350 6566 -1 2 1794 1511 289 42 61 chrX 158510771 158511560 -8138736 + L1MA4 LINE L1 5378 6104 -1356 1 1794 428 247 0 0 chrX 158511714 158511795 -8138501 + ID4 SINE ID 2 82 -1 2 1794 323 136 0 17 chrX 158512090 158512150 -8138146 + GA-rich Low_complexity Low_complexity 2 60 0 2 1794 193 57 57 0 chrX 158512295 158512330 -8137966 + (TTCC)n Simple_repeat Simple_repeat 4 40 0 2 1794 852 262 24 9 chrX 158512340 158512552 -8137744 - ID_B1 SINE B4 -6 218 4 2 1794 265 324 97 21 chrX 158512847 158512992 -8137304 + MIRb SINE MIR 59 214 -54 2 1794 389 272 184 65 chrX 158513464 158513649 -8136647 + ID_B1 SINE B4 3 209 -15 2 1794 891 112 0 0 chrX 158513656 158513790 -8136506 + (GAA)n Simple_repeat Simple_repeat 2 135 0 2 1794 507 270 0 62 chrX 158515894 158516040 -8134256 + B1_Mur1 SINE Alu 13 149 0 2 1794 534 152 16 8 chrX 158516601 158516727 -8133569 + CT-rich Low_complexity Low_complexity 2 128 0 3 1794 1026 64 0 55 chrX 158517513 158517696 -8132600 + (GAAAA)n Simple_repeat Simple_repeat 2 174 0 3 1794 872 162 28 7 chrX 158518104 158518247 -8132049 + B1_Mur4 SINE Alu 5 150 0 3 1794 806 250 0 6 chrX 158519163 158519320 -8130976 + RSINE1 SINE B4 3 158 -7 3 1794 1181 155 127 24 chrX 158519478 158519683 -8130613 + URR1A DNA MER1_type 1 226 0 3 1794 405 241 23 11 chrX 158519901 158519989 -8130307 - B1F SINE Alu -59 90 2 3 1794 270 246 0 30 chrX 158519929 158519996 -8130300 - B4A SINE B4 -146 146 82 3 1794 241 348 26 17 chrX 158520135 158520252 -8130044 + MIR SINE MIR 71 188 -74 3 1794 315 317 142 16 chrX 158520419 158520602 -8129694 + MIRb SINE MIR 54 259 -9 3 1794 755 332 86 55 chrX 158520645 158521133 -8129163 + MLT1H LTR MaLR 20 522 -27 3 1794 249 209 0 0 chrX 158521195 158521262 -8129034 + CT-rich Low_complexity Low_complexity 3 69 0 4 1794 425 274 70 31 chrX 158521435 158521563 -8128733 + RSINE1 SINE B4 5 137 -28 4 1794 183 42 0 0 chrX 158521570 158521594 -8128702 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1794 219 139 0 0 chrX 158521594 158521630 -8128666 + (AGGGGG)n Simple_repeat Simple_repeat 6 41 0 4 1794 390 310 78 102 chrX 158521965 158522220 -8128076 + B4A SINE B4 44 292 0 4 1794 433 233 58 40 chrX 158522594 158522759 -8127537 + L1MB8 LINE L1 5862 6025 -154 4 1794 180 304 0 35 chrX 158522881 158522939 -8127357 + MIR SINE MIR 201 256 -6 3 1794 216 0 0 0 chrX 158523319 158523343 -8126953 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1794 247 310 14 3 chrX 158524058 158524143 -8126153 - MER5A DNA MER1_type 0 189 82 4 1794 225 0 0 0 chrX 158524420 158524445 -8125851 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 4 1794 705 248 0 7 chrX 158524538 158524680 -8125616 + ID_B1 SINE B4 84 224 0 4 1794 231 309 100 40 chrX 158524876 158525029 -8125267 + MIR SINE MIR 61 215 -53 5 1794 206 231 0 0 chrX 158525079 158525118 -8125178 + (CAT)n Simple_repeat Simple_repeat 3 41 0 5 1794 237 340 53 72 chrX 158526136 158526288 -8124008 + B4 SINE B4 70 218 -74 5 1794 618 248 15 0 chrX 158526163 158526296 -8124000 + B1F2 SINE Alu 15 149 0 5 1794 21 0 0 0 chrX 158526525 158526546 -8123750 + AT_rich Low_complexity Low_complexity 1 21 0 5 1794 384 22 0 0 chrX 158526810 158526855 -8123441 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1794 749 256 237 23 chrX 158526910 158527218 -8123078 + MTEa LTR MaLR 6 379 0 5 1794 2033 156 52 121 chrX 158527232 158527465 -8122831 + ORR1B1 LTR MaLR 1 225 -169 5 1794 1232 68 0 0 chrX 158527465 158527612 -8122684 + B1_Mus2 SINE Alu 1 147 0 5 1794 2033 156 52 121 chrX 158527612 158527801 -8122495 + ORR1B1 LTR MaLR 226 394 0 5 1794 1229 276 44 18 chrX 158529164 158529618 -8120678 - Charlie4a DNA MER1_type -10 498 33 5 1794 1739 189 88 16 chrX 158529682 158530059 -8120237 - MTD LTR MaLR -8 411 8 6 1794 430 377 10 79 chrX 158530359 158530650 -8119646 + MLT1M LTR MaLR 55 325 -347 6 1794 22 35 0 0 chrX 158531023 158531052 -8119244 + AT_rich Low_complexity Low_complexity 1 29 0 6 1794 194 386 0 0 chrX 158531235 158531323 -8118973 + L2b LINE L2 3287 3374 -1 6 1794 300 433 43 5 chrX 158531645 158531854 -8118442 + MIRb SINE MIR 40 256 -12 6 1794 607 289 28 88 chrX 158531888 158532104 -8118192 + ID_B1 SINE B4 1 203 -21 6 1794 288 244 51 13 chrX 158532076 158532155 -8118141 + B1F SINE Alu 68 149 0 6 1794 421 300 43 12 chrX 158532304 158532466 -8117830 + MIRb SINE MIR 93 259 -9 6 1794 207 182 0 0 chrX 158532847 158532880 -8117416 + (CAG)n Simple_repeat Simple_repeat 3 35 0 6 1794 227 212 35 81 chrX 158533449 158533536 -8116760 + L1M6 LINE L1 2041 2123 -4373 6 1794 232 333 121 0 chrX 158533838 158533937 -8116359 + MIRb SINE MIR 49 159 -109 7 1794 516 254 8 34 chrX 158533938 158534056 -8116240 - B4A SINE B4 -177 115 1 7 1794 492 89 0 0 chrX 158534607 158534686 -8115610 + (TC)n Simple_repeat Simple_repeat 2 80 0 7 1794 333 0 0 0 chrX 158534686 158534723 -8115573 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1794 261 159 68 0 chrX 158534926 158534970 -8115326 + MamSINE1 SINE tRNA 6 52 -238 7 1794 435 333 0 26 chrX 158535734 158535885 -8114411 + RSINE1 SINE B4 19 165 0 7 1794 240 130 0 0 chrX 158535892 158535938 -8114358 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1794 234 325 0 24 chrX 158536336 158536418 -8113878 - L1MDb LINE L1 -6308 101 22 7 1794 462 266 14 41 chrX 158537001 158537146 -8113150 + MER5B DNA MER1_type 2 142 -36 7 1794 338 306 0 0 chrX 158537150 158537222 -8113074 + ID4_ SINE ID 1 72 -11 7 1794 221 296 42 0 chrX 158538460 158538531 -8111765 - MIRb SINE MIR -71 197 124 8 1794 187 147 29 0 chrX 158539064 158539098 -8111198 - MIRc SINE MIR -120 148 114 8 1794 703 326 91 41 chrX 158539225 158539596 -8110700 + MLT1J2 LTR MaLR 36 420 -28 8 1794 333 326 86 14 chrX 158539670 158539810 -8110486 + MER5A DNA MER1_type 1 150 -39 8 1794 213 242 13 143 chrX 158539817 158539894 -8110402 - ID4_ SINE ID 0 83 17 8 1794 316 333 21 28 chrX 158540293 158540435 -8109861 + MIR SINE MIR 108 248 -14 8 1794 209 265 44 0 chrX 158540451 158540519 -8109777 + MIRc SINE MIR 77 147 -121 8 1794 815 188 126 84 chrX 158540598 158540813 -8109483 - URR1A DNA MER1_type -2 224 1 8 1794 190 301 144 84 chrX 158541978 158542145 -8108151 + MER5B DNA MER1_type 2 178 0 8 1794 191 364 74 25 chrX 158542174 158542295 -8108001 + L2c LINE L2 3081 3207 -180 8 1794 609 143 23 11 chrX 158542389 158542566 -8107730 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 9 1794 216 0 0 0 chrX 158542577 158542601 -8107695 + (TG)n Simple_repeat Simple_repeat 1 24 0 9 1794 977 307 92 29 chrX 158542799 158543212 -8107084 + MLT1J2 LTR MaLR 1 439 -9 9 1794 241 303 89 84 chrX 158544077 158544279 -8106017 - L2c LINE L2 0 3387 3185 9 1794 340 314 18 0 chrX 158544319 158544424 -8105872 - L2b LINE L2 -2 3424 3286 9 1794 296 301 21 0 chrX 158544494 158544587 -8105709 - MIR SINE MIR -38 224 130 9 1794 288 0 0 0 chrX 158544941 158544973 -8105323 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 9 1794 393 22 0 0 chrX 158545080 158545126 -8105170 + (CA)n Simple_repeat Simple_repeat 2 47 0 9 1794 815 260 182 46 chrX 158545688 158545884 -8104412 + L1MB7 LINE L1 5681 5891 -293 9 1794 351 0 0 0 chrX 158545884 158545923 -8104373 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 1794 815 260 182 46 chrX 158545923 158546165 -8104131 + L1MB7 LINE L1 5892 6179 -5 9 1794 201 121 0 0 chrX 158546244 158546277 -8104019 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 1794 448 290 0 0 chrX 158546453 158546546 -8103750 + B1F SINE Alu 1 93 -56 1 1794 270 0 0 0 chrX 158547317 158547347 -8102949 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1794 281 317 0 0 chrX 158547518 158547600 -8102696 + L2a LINE L2 3336 3417 -9 1 1794 346 346 87 57 chrX 158547779 158548079 -8102217 + Charlie2a DNA MER1_type 7 315 -2546 1 1794 294 321 89 32 chrX 158548268 158548458 -8101838 + Charlie2a DNA MER1_type 1470 1670 -1191 1 1794 669 234 6 48 chrX 158548464 158548630 -8101666 - MER5A1 DNA MER1_type -1 165 7 1 1794 1097 188 43 19 chrX 158548705 158548916 -8101380 + B3 SINE B2 1 216 0 1 1794 391 279 0 51 chrX 158550223 158550340 -8099956 - MIR3 SINE MIR -3 205 95 1 1794 558 219 157 13 chrX 158550571 158550724 -8099572 - MER63A DNA AcHobo -10 200 26 1 1794 297 334 35 6 chrX 158551871 158552057 -8098239 + L1MA4A LINE L1 5814 6001 -1472 1 1794 22 70 0 0 chrX 158552121 158552164 -8098132 + AT_rich Low_complexity Low_complexity 1 43 0 1 1794 697 144 29 0 chrX 158552169 158552273 -8098023 + U6 snRNA snRNA 1 107 0 1 1794 305 0 0 48 chrX 158552357 158552399 -8097897 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 1 1794 1026 296 16 12 chrX 158552618 158552871 -8097425 + B4 SINE B4 11 264 -28 1 1794 405 0 0 0 chrX 158552903 158552948 -8097348 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1794 270 0 0 0 chrX 158552948 158552977 -8097319 + (GA)n Simple_repeat Simple_repeat 2 31 0 1 1794 341 251 38 10 chrX 158553366 158553494 -8096802 - MIRb SINE MIR -5 263 124 1 1794 781 286 27 53 chrX 158554603 158554828 -8095468 + MER20 DNA MER1_type 1 219 0 1 1794 557 284 117 62 chrX 158555359 158555745 -8094551 + L1MA6 LINE L1 5894 6300 0 1 1794 554 291 102 56 chrX 158555748 158556032 -8094264 + L1ME3 LINE L1 5844 6140 -22 1 1794 1243 183 34 5 chrX 158556073 158556282 -8094014 + B3 SINE B2 2 216 0 1 1794 261 128 0 0 chrX 158556609 158556656 -8093640 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1794 288 324 19 0 chrX 158557286 158557391 -8092905 + (TGGA)n Simple_repeat Simple_repeat 1 107 0 1 1794 205 311 13 7 chrX 158557403 158557555 -8092741 + (TGGA)n Simple_repeat Simple_repeat 4 156 0 1 1794 210 191 0 0 chrX 158558503 158558545 -8091751 + (CATA)n Simple_repeat Simple_repeat 1 42 0 1 1794 1760 235 29 32 chrX 158560054 158560600 -8089696 + Lx7 LINE L1 7005 7680 -16 1 1794 1230 42 21 0 chrX 158560608 158560751 -8089545 + B1_Mm SINE Alu 2 147 0 1 1794 867 212 0 7 chrX 158560785 158560932 -8089364 - B1_Mur2 SINE Alu -2 147 2 1 1794 438 298 40 8 chrX 158560976 158561101 -8089195 + MER58B DNA MER1_type 212 340 -1 1 1794 314 292 37 111 chrX 158561203 158561365 -8088931 + ORR1E LTR MaLR 1 150 -209 1 1794 231 179 0 0 chrX 158561389 158561456 -8088840 + CT-rich Low_complexity Low_complexity 2 68 0 1 1794 255 61 0 0 chrX 158561456 158561489 -8088807 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1794 220 297 97 42 chrX 158561516 158561660 -8088636 - L2a LINE L2 -7 3419 3268 1 1794 185 0 40 0 chrX 158561895 158561920 -8088376 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1794 285 51 0 0 chrX 158561984 158562023 -8088273 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 1 1794 310 278 14 0 chrX 158562036 158562108 -8088188 - B1F SINE Alu -1 148 76 1 1794 744 96 0 0 chrX 158563560 158563675 -8086621 + (TG)n Simple_repeat Simple_repeat 2 116 0 1 1794 1214 111 64 0 chrX 158564418 158564589 -8085707 - B2_Mm2 SINE B2 -12 183 2 1 1794 507 162 222 0 chrX 158564855 158564954 -8085342 - URR1A DNA MER1_type -105 121 1 1 1794 427 227 11 11 chrX 158565023 158565112 -8085184 + PB1D10 SINE Alu 24 112 -5 1 1794 189 0 0 0 chrX 158565895 158565916 -8084380 + (CTG)n Simple_repeat Simple_repeat 3 23 0 1 1794 1637 61 9 9 chrX 158566269 158566485 -8083811 - L1_Mus3 LINE L1 0 6638 6423 1 1794 1204 62 0 0 chrX 158566485 158566630 -8083666 + L1_Mus4 LINE L1 6074 6218 -418 1 1794 496 274 13 13 chrX 158566631 158566786 -8083510 + MER58B DNA MER1_type 172 326 -15 1 1794 1171 75 0 27 chrX 158567569 158567719 -8082577 - B1_Mus2 SINE Alu -1 146 1 1 1794 1055 252 24 68 chrX 158567724 158567777 -8082519 - Lx6 LINE L1 -27 7433 7382 1 1794 333 0 0 0 chrX 158567777 158567814 -8082482 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1794 1055 252 24 68 chrX 158567814 158568054 -8082242 - Lx6 LINE L1 -79 7381 7155 1 1794 812 259 38 0 chrX 158568055 158568325 -8081971 - Lx6 LINE L1 -574 6886 6455 1 1794 410 317 7 80 chrX 158570134 158570285 -8080011 + MLT1I LTR MaLR 64 203 -208 1 1794 979 272 16 73 chrX 158570742 158571127 -8079169 + MLT1A LTR MaLR 7 369 -5 1 1794 603 308 0 11 chrX 158573200 158573387 -8076909 + MIRc SINE MIR 80 264 -4 1 1794 184 233 23 0 chrX 158574067 158574110 -8076186 - L2b LINE L2 -3 3372 3329 1 1794 647 382 113 18 chrX 158574123 158574520 -8075776 + MLT1J2 LTR MaLR 7 441 -7 1 1794 181 271 152 30 chrX 158574521 158574620 -8075676 - L2b LINE L2 -42 3345 3235 1 1794 452 233 318 39 chrX 158576043 158576237 -8074059 + MLT1H LTR MaLR 2 249 -199 1 1794 1531 245 146 31 chrX 158576265 158576935 -8073361 - L1M4 LINE L1 -1512 4634 3888 1 1794 235 360 68 56 chrX 158576987 158577149 -8073147 + L2c LINE L2 3195 3378 -9 1 1794 1275 144 119 0 chrX 158577166 158577368 -8072928 + URR1A DNA MER1_type 1 226 0 1 1794 583 249 10 9 chrX 158578076 158578227 -8072069 + MLT1H LTR MaLR 431 586 -5 1 1794 440 295 0 43 chrX 158578692 158578809 -8071487 - PB1D10 SINE Alu 0 117 6 1 1794 315 0 0 0 chrX 158579253 158579288 -8071008 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1 1794 1173 90 0 0 chrX 158579288 158579432 -8070864 - B1_Mm SINE Alu -3 144 1 1 1794 231 204 0 0 chrX 158579603 158579652 -8070644 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 1 1794 321 89 0 0 chrX 158580256 158580301 -8069995 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1794 216 0 0 0 chrX 158580383 158580407 -8069889 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1794 442 267 103 2 chrX 158581544 158581689 -8068607 - MIR SINE MIR -32 236 71 1 1794 252 0 0 0 chrX 158581786 158581814 -8068482 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1794 267 316 26 0 chrX 158581816 158581892 -8068404 - B3 SINE B2 -32 184 107 1 1794 333 0 0 0 chrX 158582059 158582096 -8068200 + (TC)n Simple_repeat Simple_repeat 1 37 0 1 1794 288 0 0 0 chrX 158582096 158582127 -8068169 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1794 219 88 0 0 chrX 158583063 158583097 -8067199 + (CAT)n Simple_repeat Simple_repeat 2 35 0 1 1794 819 226 67 67 chrX 158583747 158584088 -8066208 + Lx9 LINE L1 7293 7633 -11 1 1794 336 310 153 41 chrX 158584220 158584381 -8065915 + L2a LINE L2 2705 2895 -524 1 1794 185 0 40 0 chrX 158584381 158584406 -8065890 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 1794 359 310 110 61 chrX 158584406 158584696 -8065600 + L2a LINE L2 2896 3192 -234 1 1794 1297 335 48 31 chrX 158585660 158586300 -8063996 + L3 LINE CR1 3267 3917 -572 1 1794 414 57 0 0 chrX 158586735 158586788 -8063508 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1794 490 65 54 0 chrX 158586790 158586882 -8063414 + (GA)n Simple_repeat Simple_repeat 2 98 0 1 1794 395 300 40 0 chrX 158586882 158586982 -8063314 - PB1D10 SINE Alu -12 105 2 1 1794 567 0 0 0 chrX 158587481 158587544 -8062752 + (GA)n Simple_repeat Simple_repeat 1 63 0 1 1794 997 254 85 27 chrX 158587572 158587831 -8062465 - B4 SINE B4 -14 278 5 1 1794 458 325 8 31 chrX 158588195 158588325 -8061971 + ID_B1 SINE B4 87 213 -11 1 1794 1250 74 0 0 chrX 158588326 158588474 -8061822 + B1_Mus1 SINE Alu 1 148 0 1 1794 477 0 0 0 chrX 158588475 158588528 -8061768 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 1 1794 364 187 12 96 chrX 158588555 158588638 -8061658 + MT2B LTR ERVL 163 238 -363 1 1794 743 176 21 42 chrX 158588568 158588710 -8061586 + B1_Mm SINE Alu 9 147 0 1 1794 1104 163 143 0 chrX 158589192 158589388 -8060908 - URR1A DNA MER1_type 0 226 3 1 1794 362 344 73 30 chrX 158589873 158590038 -8060258 - LTR16C LTR ERVL -89 400 229 1 1794 405 0 0 0 chrX 158590045 158590090 -8060206 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 1 1794 251 286 26 0 chrX 158590231 158590308 -8059988 + MIRb SINE MIR 182 260 -8 1 1794 394 250 182 36 chrX 158590322 158590459 -8059837 + RSINE1 SINE B4 3 159 -6 1 1794 474 292 40 108 chrX 158590459 158590551 -8059745 + L1ME3A LINE L1 4906 4993 -1153 1 1794 662 151 144 45 chrX 158590551 158590678 -8059618 + B1_Mur2 SINE Alu 1 140 -9 1 1794 279 0 0 0 chrX 158590678 158590709 -8059587 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1794 553 303 67 83 chrX 158590709 158591413 -8058883 + L1ME3A LINE L1 4994 5690 -483 1 1794 973 224 47 14 chrX 158591413 158591626 -8058670 + ID_B1 SINE B4 5 224 0 1 1794 553 322 112 41 chrX 158591626 158591853 -8058443 + L1ME3A LINE L1 5691 5931 -242 1 1794 511 310 169 52 chrX 158592158 158592757 -8057539 + L2 LINE L2 1310 1978 -1441 1 1794 294 254 16 0 chrX 158592838 158592901 -8057395 - ID4 SINE ID -8 75 12 1 1794 291 127 50 12 chrX 158592946 158593026 -8057270 + (TCTCTG)n Simple_repeat Simple_repeat 4 86 0 1 1794 402 21 0 0 chrX 158593027 158593074 -8057222 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1794 453 319 86 72 chrX 158593329 158593690 -8056606 + L2 LINE L2 2297 2662 -757 1 1794 381 282 64 7 chrX 158594274 158594415 -8055881 + LTR16E1 LTR ERVL 403 566 -2 1 1794 569 245 26 39 chrX 158594565 158594718 -8055578 + RSINE1 SINE B4 9 159 -6 1 1794 23 0 0 0 chrX 158594721 158594744 -8055552 + AT_rich Low_complexity Low_complexity 1 23 0 1 1795 21 0 0 0 chrX 158597252 158597273 -8053023 + GC_rich Low_complexity Low_complexity 1 21 0 1 1795 393 191 0 0 chrX 158597693 158597808 -8052488 + (TG)n Simple_repeat Simple_repeat 1 115 0 1 1795 209 219 31 15 chrX 158597979 158598044 -8052252 + (CGGGG)n Simple_repeat Simple_repeat 4 69 0 1 1795 391 122 0 57 chrX 158600248 158600370 -8049926 + T-rich Low_complexity Low_complexity 1 115 0 2 1795 616 161 73 87 chrX 158600370 158600520 -8049776 - B1_Mus1 SINE Alu 0 148 1 2 1795 366 263 125 10 chrX 158600706 158600802 -8049494 + RSINE1 SINE B4 3 109 -56 2 1795 417 115 0 0 chrX 158600884 158600962 -8049334 + (TC)n Simple_repeat Simple_repeat 2 79 0 2 1795 324 0 0 0 chrX 158600963 158600999 -8049297 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1795 3214 143 10 98 chrX 158602027 158602638 -8047658 - RLTR31B_Mm LTR ERVK 0 557 1 2 1795 1561 249 25 58 chrX 158602639 158603155 -8047141 - RMER3D-int LTR ERVK -1 2841 2343 2 1795 488 149 11 0 chrX 158603565 158603659 -8046637 + (TAGA)n Simple_repeat Simple_repeat 4 98 0 2 1795 300 326 65 49 chrX 158604165 158604349 -8045947 - L2c LINE L2 -14 3373 3187 2 1795 310 357 35 35 chrX 158605717 158605833 -8044463 + RSINE1 SINE B4 12 127 -38 2 1795 279 0 0 0 chrX 158605840 158605871 -8044425 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1795 636 38 0 0 chrX 158606797 158606876 -8043420 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 2 1795 1277 73 6 0 chrX 158606876 158607054 -8043242 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 2 1795 1237 50 0 0 chrX 158607636 158607775 -8042521 + B1_Mus2 SINE Alu 1 139 -8 2 1795 200 59 29 0 chrX 158607775 158607809 -8042487 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2 1795 333 136 0 0 chrX 158607825 158607891 -8042405 + (TG)n Simple_repeat Simple_repeat 1 66 0 2 1795 812 87 123 23 chrX 158608021 158608151 -8042145 + B1_Mus2 SINE Alu 5 147 0 2 1795 264 149 0 0 chrX 158608153 158608200 -8042096 + (A)n Simple_repeat Simple_repeat 1 47 0 2 1795 278 281 40 100 chrX 158608217 158608367 -8041929 + LTR16A1 LTR ERVL 316 456 0 2 1795 232 350 25 0 chrX 158608703 158608823 -8041473 + Charlie21a DNA MER1_type 518 640 -573 2 1795 26 0 0 0 chrX 158608868 158608894 -8041402 + AT_rich Low_complexity Low_complexity 1 26 0 2 1795 255 233 100 0 chrX 158608894 158608954 -8041342 + ID4_ SINE ID 18 83 0 2 1795 192 111 0 0 chrX 158610102 158610138 -8040158 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2 1795 494 283 8 42 chrX 158610579 158610697 -8039599 - MER5B DNA MER1_type -3 175 62 2 1795 416 316 52 36 chrX 158610885 158611103 -8039193 - L2a LINE L2 -2 3424 3158 2 1795 443 82 14 0 chrX 158611569 158611642 -8038654 + (TAGA)n Simple_repeat Simple_repeat 3 76 0 2 1795 197 281 35 0 chrX 158612371 158612428 -8037868 + MIRb SINE MIR 209 267 -1 2 1795 584 236 65 8 chrX 158612978 158613102 -8037194 + RSINE1 SINE B4 1 131 -34 2 1795 659 35 12 0 chrX 158613103 158613189 -8037107 + (TAGA)n Simple_repeat Simple_repeat 4 90 0 2 1795 248 28 0 53 chrX 158614109 158614147 -8036149 + (TCTCTG)n Simple_repeat Simple_repeat 2 37 0 2 1795 324 0 0 0 chrX 158614152 158614188 -8036108 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1795 11792 11 3 3 chrX 158615291 158617036 -8033260 + L1Md_A LINE L1 1 1539 -4344 2 1795 3119 24 0 6 chrX 158617036 158617375 -8032921 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1795 22566 40 6 32 chrX 158617375 158620191 -8030105 + IAPEz-int LTR ERVK 8 2751 -3730 2 1795 29584 14 1 0 chrX 158620183 158623418 -8026878 + IAPEz-int LTR ERVK 3244 6481 0 2 1795 3119 24 0 6 chrX 158623418 158623757 -8026539 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1795 36617 3 0 0 chrX 158623757 158627810 -8022486 + L1Md_A LINE L1 1534 5586 -297 2 1795 9573 5 0 0 chrX 158627810 158628806 -8021490 + L1Md_A LINE L1 5587 6582 0 2 1795 228 211 0 0 chrX 158629594 158629670 -8020626 + GA-rich Low_complexity Low_complexity 2 77 0 2 1795 726 210 137 21 chrX 158629683 158629873 -8020423 + B3 SINE B2 2 213 -3 2 1795 242 318 0 0 chrX 158630040 158630125 -8020171 + L1M5 LINE L1 4201 4285 -1861 2 1795 261 0 0 0 chrX 158630359 158630388 -8019908 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1795 886 259 4 85 chrX 158630510 158630746 -8019550 + B4 SINE B4 12 228 -64 2 1795 660 237 25 34 chrX 158630742 158630917 -8019379 + B3A SINE B2 13 185 -8 2 1795 816 65 0 0 chrX 158630929 158631036 -8019260 + (GAAA)n Simple_repeat Simple_repeat 3 109 0 2 1795 369 0 0 0 chrX 158631086 158631127 -8019169 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1795 324 0 0 0 chrX 158631127 158631162 -8019134 + (GA)n Simple_repeat Simple_repeat 2 37 0 2 1795 593 322 123 45 chrX 158631316 158631739 -8018557 + LTR33 LTR ERVL 24 479 -36 2 1795 296 364 25 8 chrX 158631788 158631910 -8018386 - MIRb SINE MIR -77 191 68 2 1795 23 33 0 0 chrX 158632637 158632667 -8017629 + AT_rich Low_complexity Low_complexity 1 30 0 2 1795 973 102 0 0 chrX 158632668 158632796 -8017500 - Lx3C LINE L1 -1150 5826 5699 2 1795 3130 112 19 2 chrX 158632799 158633228 -8017068 + Lx3B LINE L1 6535 6970 -3 2 1795 643 176 11 86 chrX 158633400 158633574 -8016722 - Lx7 LINE L1 0 7696 7536 2 1795 249 296 29 39 chrX 158633577 158633679 -8016617 + MIR SINE MIR 162 262 0 2 1795 493 289 175 25 chrX 158634791 158635117 -8015179 - LTR50 LTR ERVL -2 793 419 2 1795 264 253 126 78 chrX 158635212 158635326 -8014970 - LTR50 LTR ERVL -613 182 61 2 1795 644 294 91 118 chrX 158635326 158635449 -8014847 - MLT1B LTR MaLR -1 389 261 2 1795 541 302 6 42 chrX 158635449 158635615 -8014681 + RSINE1 SINE B4 4 163 -2 2 1795 644 294 91 118 chrX 158635615 158635889 -8014407 - MLT1B LTR MaLR -130 260 3 2 1795 3904 175 20 19 chrX 158636599 158636833 -8013463 + RLTR17 LTR ERVK 1 238 -454 2 1795 2130 70 14 11 chrX 158636833 158637109 -8013187 + L1Md_F2 LINE L1 6306 6582 0 2 1795 3904 175 20 19 chrX 158637109 158637563 -8012733 + RLTR17 LTR ERVK 239 690 -2 2 1795 247 248 133 14 chrX 158637582 158637725 -8012571 + L1MEg LINE L1 939 1098 -5144 2 1795 259 202 60 60 chrX 158637743 158637843 -8012453 + L1P5 LINE L1 5335 5434 -722 2 1795 807 285 114 31 chrX 158637829 158638275 -8012021 + L1MA4 LINE L1 5564 6046 -254 2 1795 446 306 183 19 chrX 158638350 158638770 -8011526 + L1MEg LINE L1 2204 2692 -3454 2 1795 6502 118 30 2 chrX 158639001 158639901 -8010395 - Lx4A LINE L1 -2 7056 6132 2 1795 501 244 55 49 chrX 158640306 158640470 -8009826 + L1MEg LINE L1 3897 4061 -2085 2 1795 588 50 0 0 chrX 158640675 158640755 -8009541 + (TC)n Simple_repeat Simple_repeat 1 80 0 2 1795 22 0 0 0 chrX 158640802 158640824 -8009472 + AT_rich Low_complexity Low_complexity 1 22 0 2 1795 250 94 132 0 chrX 158641154 158641207 -8009089 + L1MEg LINE L1 4309 4368 -1778 2 1795 829 20 0 19 chrX 158641238 158641342 -8008954 - B1_Mus2 SINE Alu -2 145 44 2 1795 8198 30 0 0 chrX 158641404 158642346 -8007950 - L1Md_A LINE L1 -1 6581 5640 2 1795 1756 207 38 34 chrX 158642429 158642844 -8007452 - MTD LTR MaLR -21 398 1 2 1795 336 355 0 0 chrX 158642888 158642998 -8007298 + PB1D10 SINE Alu 1 110 -7 2 1795 539 277 86 46 chrX 158643009 158643183 -8007113 + B3A SINE B2 2 182 -16 2 1795 4643 45 17 0 chrX 158643330 158643865 -8006431 + L1_Mus1 LINE L1 6024 6567 0 2 1795 252 346 26 0 chrX 158645048 158645126 -8005170 + LTR16C LTR ERVL 186 265 -224 2 1795 264 346 110 0 chrX 158645167 158645294 -8005002 + LTR16C LTR ERVL 349 489 0 2 1795 288 286 46 35 chrX 158647290 158647377 -8002919 + ID_B1 SINE B4 83 170 -54 2 1795 306 276 46 0 chrX 158647310 158647397 -8002899 + PB1D10 SINE Alu 22 112 -5 2 1795 280 268 55 27 chrX 158647462 158647535 -8002761 + B3A SINE B2 5 79 -119 2 1795 357 143 172 21 chrX 158647614 158647707 -8002589 + RLTR25B LTR ERVK 403 509 -519 2 1795 874 27 0 26 chrX 158647638 158647753 -8002543 + B1_Mm SINE Alu 36 147 0 2 1795 220 67 0 0 chrX 158647754 158647784 -8002512 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1795 357 82 0 0 chrX 158647784 158647833 -8002463 + (GGA)n Simple_repeat Simple_repeat 3 51 0 2 1795 317 347 0 10 chrX 158647833 158647929 -8002367 + B4A SINE B4 198 292 0 2 1795 225 178 0 0 chrX 158647938 158647983 -8002313 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 1795 948 278 50 94 chrX 158648660 158649065 -8001231 + MLT2D LTR ERVL 8 357 -57 2 1795 579 29 0 0 chrX 158649065 158649134 -8001162 + (TC)n Simple_repeat Simple_repeat 1 69 0 2 1795 948 268 59 37 chrX 158649134 158649176 -8001120 + MLT2D LTR ERVL 358 413 -1 2 1795 486 224 75 6 chrX 158650185 158650331 -7999965 + Lx7 LINE L1 5636 5798 -502 2 1795 549 318 31 28 chrX 158650345 158650636 -7999660 - B4A SINE B4 0 292 1 2 1795 330 286 0 0 chrX 158650637 158650728 -7999568 + Lx7 LINE L1 5790 5880 -420 2 1795 22 35 0 0 chrX 158650995 158651024 -7999272 + AT_rich Low_complexity Low_complexity 1 29 0 2 1795 349 317 44 82 chrX 158651027 158651058 -7999238 + B4 SINE B4 67 218 -74 2 1795 591 230 24 8 chrX 158651058 158651185 -7999111 + B1F2 SINE Alu 13 141 -8 2 1795 546 16 0 0 chrX 158651518 158651581 -7998715 + (GA)n Simple_repeat Simple_repeat 1 63 0 2 1795 250 290 136 14 chrX 158652047 158652187 -7998109 + MLT1H LTR MaLR 5 161 -388 2 1795 2330 85 6 0 chrX 158652386 158652703 -7997593 - ORR1A2 LTR MaLR -8 319 1 2 1795 220 262 4 53 chrX 158652808 158652912 -7997384 - MIRc SINE MIR -113 155 57 2 1795 376 51 51 0 chrX 158653558 158653617 -7996679 - B2_Mm1a SINE B2 -5 188 127 2 1795 498 33 0 0 chrX 158653656 158653716 -7996580 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 2 1795 1198 89 0 0 chrX 158653716 158653873 -7996423 - B2_Mm2 SINE B2 -37 158 2 2 1795 474 212 47 0 chrX 158653893 158653978 -7996318 - PB1D7 SINE Alu 0 120 32 2 1795 216 0 0 0 chrX 158654542 158654566 -7995730 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1795 226 67 22 22 chrX 158654679 158654725 -7995571 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 2 1795 1154 245 54 39 chrX 158654830 158655262 -7995034 - Lx2B LINE L1 -80 6920 6209 2 1795 719 346 97 47 chrX 158655376 158655840 -7994456 + MLT1H2 LTR MaLR 3 489 0 2 1795 3054 52 0 3 chrX 158656273 158656620 -7993676 - ORR1A1 LTR MaLR 0 346 1 2 1795 1207 68 0 20 chrX 158657076 158657226 -7993070 - B1_Mm SINE Alu 0 147 1 2 1795 957 269 121 16 chrX 158657228 158657541 -7992755 - ORR1E LTR MaLR -5 354 9 2 1795 222 37 0 0 chrX 158657551 158657578 -7992718 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1795 1291 48 0 0 chrX 158657578 158657725 -7992571 - B1_Mus2 SINE Alu 0 147 1 2 1795 558 305 109 26 chrX 158657801 158658276 -7992020 - L1M5 LINE L1 -543 5630 5121 2 1795 263 309 24 12 chrX 158658960 158659042 -7991254 - LFSINE_Vert SINE SINE -77 382 300 3 1795 1273 222 134 27 chrX 158659043 158659417 -7990879 - MTD LTR MaLR 0 419 6 3 1795 401 339 24 57 chrX 158660242 158660457 -7989839 - MIRb SINE MIR -14 254 40 3 1795 547 283 49 133 chrX 158660521 158660928 -7989368 + MLT1A LTR MaLR 1 373 -1 3 1795 670 326 115 54 chrX 158661013 158661474 -7988822 - LTR16C LTR ERVL 0 489 1 3 1795 202 280 20 0 chrX 158662537 158662587 -7987709 + MIRc SINE MIR 36 86 -182 3 1795 461 278 161 0 chrX 158662676 158662838 -7987458 - MER58A DNA MER1_type -2 222 35 3 1795 486 269 180 25 chrX 158662832 158663076 -7987220 + LTR37A LTR ERV1 40 321 -105 3 1795 707 295 168 25 chrX 158663088 158663488 -7986808 - MER31B LTR ERV1 -9 457 1 3 1795 1721 301 73 59 chrX 158663901 158664915 -7985381 - MER31-int LTR ERV1 -780 4576 3330 3 1795 647 309 72 0 chrX 158665198 158665392 -7984904 + ID_B1 SINE B4 17 224 0 3 1795 264 227 54 54 chrX 158665474 158665567 -7984729 - MER31-int LTR ERV1 -1841 3095 3003 3 1795 204 40 0 0 chrX 158665972 158665997 -7984299 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1795 548 187 68 75 chrX 158666171 158666304 -7983992 - MTD LTR MaLR 0 419 288 3 1795 1676 157 117 24 chrX 158666421 158666754 -7983542 - ORR1C1 LTR MaLR 0 378 15 3 1795 373 322 45 6 chrX 158666797 158666975 -7983321 - L1M2c LINE L1 -4518 2271 2087 3 1795 2620 274 58 95 chrX 158667053 158668421 -7981875 - MER31-int LTR ERV1 -3589 1347 30 3 1795 988 291 152 32 chrX 158668486 158668894 -7981402 - MER31B LTR ERV1 -5 461 5 3 1795 293 346 21 35 chrX 158669505 158669646 -7980650 + L2b LINE L2 3025 3163 -212 3 1795 211 322 22 22 chrX 158670724 158670813 -7979483 + MIR3 SINE MIR 82 170 -38 3 1795 8503 137 35 35 chrX 158671479 158673262 -7977034 + Lx4A LINE L1 5269 7047 -11 3 1795 322 21 0 41 chrX 158674799 158674848 -7975448 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 3 1795 370 267 0 34 chrX 158675034 158675123 -7975173 + 5S rRNA rRNA 5 90 -31 3 1795 1676 208 63 28 chrX 158675448 158675846 -7974450 - MTD LTR MaLR -16 403 3 3 1795 636 250 0 83 chrX 158675916 158676073 -7974223 + B1F SINE Alu 1 144 -5 3 1795 7938 36 0 3 chrX 158676548 158677441 -7972855 + L1Md_T LINE L1 5693 6582 0 3 1795 807 152 158 40 chrX 158677441 158677642 -7972654 + MTD LTR MaLR 183 409 -10 3 1795 423 0 0 0 chrX 158678546 158678593 -7971703 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 1795 258 32 0 0 chrX 158678593 158678623 -7971673 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1795 21 36 0 0 chrX 158678647 158678675 -7971621 + AT_rich Low_complexity Low_complexity 1 28 0 3 1795 344 338 23 23 chrX 158678987 158679120 -7971176 - MER94 DNA AcHobo -1 133 1 3 1795 758 308 121 24 chrX 158679890 158680229 -7970067 + MLT1F LTR MaLR 1 372 -176 3 1795 504 278 92 62 chrX 158680252 158680524 -7969772 + L1ME1 LINE L1 5900 6179 0 3 1795 306 125 0 0 chrX 158680627 158680675 -7969621 + (A)n Simple_repeat Simple_repeat 1 48 0 3 1795 448 311 165 72 chrX 158681462 158681881 -7968415 - MLT1H LTR MaLR -8 541 47 3 1795 540 250 215 110 chrX 158682969 158683486 -7966810 - RMER4B LTR ERVK -10 575 5 3 1795 328 333 102 8 chrX 158683484 158683602 -7966694 + MLT1J1 LTR MaLR 31 159 -285 3 1795 277 321 35 23 chrX 158683666 158683752 -7966544 + MLT1J1 LTR MaLR 258 344 -104 3 1795 180 0 0 0 chrX 158683821 158683841 -7966455 + (TTG)n Simple_repeat Simple_repeat 3 22 0 3 1795 2906 115 26 37 chrX 158684030 158684492 -7965804 - MT2B LTR ERVL 0 601 145 3 1795 1082 306 66 2 chrX 158684669 158685062 -7965234 + L1ME2 LINE L1 5608 6025 -139 3 1795 4255 208 44 55 chrX 158685430 158685515 -7964781 - L1_Mur3 LINE L1 -478 5402 5318 3 1795 768 58 0 0 chrX 158685515 158685618 -7964678 + L1_Mus1 LINE L1 6465 6567 0 3 1795 4255 208 44 55 chrX 158685618 158686669 -7963627 - Lx7 LINE L1 -563 5317 4279 3 1795 2129 229 110 10 chrX 158686675 158687501 -7962795 + Lx7 LINE L1 5404 6304 -1169 3 1795 1561 243 93 50 chrX 158687520 158688082 -7962214 + Lx7 LINE L1 6922 7680 -16 3 1795 23 0 0 0 chrX 158688082 158688105 -7962191 + AT_rich Low_complexity Low_complexity 1 23 0 3 1795 584 326 74 67 chrX 158688119 158688446 -7961850 + ORR1E LTR MaLR 4 352 -22 3 1795 902 248 15 15 chrX 158688475 158688676 -7961620 - Lx7 LINE L1 -495 7201 7001 3 1795 1175 303 19 4 chrX 158689510 158689987 -7960309 + L1_Mur3 LINE L1 4165 4648 -1232 3 1795 6631 81 32 26 chrX 158690794 158691053 -7959243 - L1VL2 LINE L1 -5290 1045 800 3 1795 354 23 0 0 chrX 158691053 158691096 -7959200 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 1795 1214 44 0 0 chrX 158691096 158691233 -7959063 - B1_Mm SINE Alu -9 138 2 3 1795 6631 81 32 26 chrX 158691233 158691915 -7958381 - L1VL2 LINE L1 -5536 799 99 3 1795 890 232 155 8 chrX 158692594 158692846 -7957450 - Lx2B LINE L1 -3 6997 6709 3 1795 23 0 0 0 chrX 158692905 158692928 -7957368 + AT_rich Low_complexity Low_complexity 1 23 0 3 1795 285 167 0 0 chrX 158694148 158694202 -7956094 + GA-rich Low_complexity Low_complexity 2 55 0 3 1795 357 359 58 7 chrX 158694552 158694706 -7955590 + MLT1J1 LTR MaLR 283 444 0 3 1795 180 152 0 0 chrX 158694963 158694996 -7955300 + GA-rich Low_complexity Low_complexity 2 34 0 3 1795 182 371 11 33 chrX 158695136 158695228 -7955068 - MER5A DNA MER1_type -65 124 35 3 1795 275 320 105 13 chrX 158695768 158695920 -7954376 + L3 LINE CR1 4219 4384 -105 3 1795 253 312 97 21 chrX 158696208 158696352 -7953944 + RLTR22_Mur LTR ERVK 996 1150 -698 3 1795 318 237 14 84 chrX 158696567 158696710 -7953586 - MLT1A1 LTR MaLR -274 134 2 3 1795 1311 41 0 0 chrX 158696776 158696922 -7953374 + B1_Mm SINE Alu 1 146 -1 3 1795 946 220 94 5 chrX 158697174 158697366 -7952930 - B3 SINE B2 -7 209 1 3 1795 190 286 63 0 chrX 158697652 158697715 -7952581 + L2c LINE L2 3313 3379 -8 3 1795 299 284 0 0 chrX 158697811 158697878 -7952418 - RMER30 DNA MER1_type -2 200 134 3 1795 309 304 184 21 chrX 158697931 158698072 -7952224 + LTR16A LTR ERVL 6 169 -282 3 1795 405 260 40 126 chrX 158698087 158698285 -7952011 + LTR16A LTR ERVL 259 439 -12 3 1795 449 229 97 16 chrX 158698791 158698915 -7951381 - RMER30 DNA MER1_type -1 201 68 3 1795 238 189 0 0 chrX 158699899 158699952 -7950344 + T-rich Low_complexity Low_complexity 2 54 0 3 1795 232 253 23 35 chrX 158700076 158700162 -7950134 + (ATGGTG)n Simple_repeat Simple_repeat 5 89 0 3 1795 378 302 43 30 chrX 158700284 158700448 -7949848 - HAL1-2a_MD LINE L1 -517 2507 2342 3 1795 2777 268 129 29 chrX 158700611 158701586 -7948710 - Lx8 LINE L1 -25 7448 6376 3 1795 293 223 61 50 chrX 158701675 158701774 -7948522 - L2a LINE L2 -67 3359 3260 3 1795 746 319 68 56 chrX 158701838 158701852 -7948444 - B4 SINE B4 -23 269 256 3 1795 270 0 0 0 chrX 158701852 158701882 -7948414 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1795 486 0 0 0 chrX 158701882 158701935 -7948361 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 1795 746 319 68 56 chrX 158701935 158701962 -7948334 - B4 SINE B4 -37 255 234 3 1795 1477 227 84 12 chrX 158701962 158702305 -7947991 + ORR1D2 LTR MaLR 1 368 -2 3 1795 746 319 68 56 chrX 158702305 158702527 -7947769 - B4 SINE B4 -59 233 2 3 1795 268 169 0 40 chrX 158702598 158702672 -7947624 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 3 1795 588 230 43 22 chrX 158703417 158703555 -7946741 - B1F1 SINE Alu -7 142 2 3 1795 6792 72 18 1 chrX 158703561 158704420 -7945876 + Lx3_Mus LINE L1 6136 7008 -1 3 1795 200 326 142 54 chrX 158704423 158704627 -7945669 - L2a LINE L2 -459 2960 2739 3 1795 282 214 69 35 chrX 158706191 158706278 -7944018 - MIR3 SINE MIR -5 203 114 3 1795 476 199 21 45 chrX 158706561 158706669 -7943627 + B1F SINE Alu 2 104 -13 3 1795 1679 237 107 27 chrX 158706791 158707277 -7943019 - Lx8 LINE L1 -2 7471 6947 3 1795 2880 287 61 17 chrX 158707377 158707525 -7942771 + Lx8 LINE L1 6024 6188 -1285 3 1795 1317 34 11 11 chrX 158707525 158707705 -7942591 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 3 1795 2880 287 61 17 chrX 158707705 158708438 -7941858 + Lx8 LINE L1 6189 6943 -530 3 1795 261 0 0 0 chrX 158708478 158708507 -7941789 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1795 447 19 0 0 chrX 158709306 158709358 -7940938 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1795 486 356 141 8 chrX 158709725 158710079 -7940217 - MLT1J2 LTR MaLR -2 446 46 3 1795 767 305 52 0 chrX 158710531 158710741 -7939555 + ID_B1 SINE B4 2 222 -2 3 1795 1246 253 88 17 chrX 158710835 158711189 -7939107 + MTE2b LTR MaLR 1 379 0 3 1795 376 308 102 14 chrX 158711418 158711602 -7938694 - MLT1J2 LTR MaLR -15 429 237 3 1795 798 21 0 0 chrX 158711624 158711720 -7938576 + B1_Mm SINE Alu 39 134 -13 3 1795 345 18 52 17 chrX 158711720 158711778 -7938518 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 3 1795 605 243 19 45 chrX 158711785 158711940 -7938356 - MLT1J2 LTR MaLR -240 208 58 3 1795 235 284 83 45 chrX 158711954 158712087 -7938209 - L3 LINE CR1 -601 3888 3751 3 1795 452 247 11 0 chrX 158713282 158713375 -7936921 + B4A SINE B4 2 95 -197 3 1795 717 342 86 0 chrX 158713375 158713451 -7936845 + B4A SINE B4 1 76 -216 3 1795 252 0 0 0 chrX 158713451 158713479 -7936817 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1795 717 342 86 0 chrX 158713479 158713671 -7936625 + B4A SINE B4 77 291 -1 3 1795 255 323 29 81 chrX 158713671 158713749 -7936547 + RSINE1 SINE B4 93 165 0 3 1795 581 188 94 117 chrX 158713896 158714161 -7936135 - Lx9 LINE L1 -2 7642 7384 3 1795 5043 200 70 17 chrX 158714167 158715402 -7934894 - Lx9 LINE L1 -776 6868 5514 3 1795 688 289 5 26 chrX 158715431 158715626 -7934670 + B3A SINE B2 1 191 -7 3 1795 288 0 0 0 chrX 158715765 158715797 -7934499 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 1795 4173 44 0 4 chrX 158715797 158716275 -7934021 + L1Md_F2 LINE L1 6095 6570 -12 3 1795 350 314 76 32 chrX 158716309 158716467 -7933829 + MER5A1 DNA MER1_type 1 165 -1 3 1795 181 182 44 22 chrX 158717161 158717206 -7933090 + L4 LINE RTE 287 332 -1697 3 1795 471 363 46 56 chrX 158717372 158717678 -7932618 - LTR16E1 LTR ERVL -94 444 142 3 1795 181 378 122 35 chrX 158718187 158718302 -7931994 + MIR SINE MIR 19 143 -65 3 1795 234 214 40 54 chrX 158718302 158718376 -7931920 - MLT1A1 LTR MaLR -66 342 270 3 1795 508 211 46 46 chrX 158718950 158719059 -7931237 - PB1D10 SINE Alu 0 117 9 3 1795 1241 48 7 0 chrX 158719793 158719938 -7930358 - B1_Mm SINE Alu -1 146 1 3 1795 564 229 9 0 chrX 158720233 158720338 -7929958 - PB1D10 SINE Alu -7 110 5 4 1795 1693 76 0 0 chrX 158720442 158720665 -7929631 - L1_Mus4 LINE L1 -7 6629 6407 4 1795 715 269 34 0 chrX 158721228 158721377 -7928919 + RSINE1 SINE B4 4 157 -8 4 1795 1309 20 0 20 chrX 158721858 158722007 -7928289 - B1_Mus1 SINE Alu -2 146 1 4 1795 209 30 0 57 chrX 158722131 158722166 -7928130 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 4 1795 315 260 66 54 chrX 158722402 158722569 -7927727 + MLT1H LTR MaLR 303 521 -28 4 1795 333 0 0 0 chrX 158722569 158722606 -7927690 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1795 271 276 25 112 chrX 158722606 158722634 -7927662 + MLT1H LTR MaLR 462 481 -8 4 1795 912 137 0 0 chrX 158722839 158722992 -7927304 + (TCTCCC)n Simple_repeat Simple_repeat 6 158 0 4 1795 1187 136 6 17 chrX 158723093 158723273 -7927023 + B2_Mm1t SINE B2 2 179 -14 4 1795 359 85 383 18 chrX 158723309 158723416 -7926880 + B2_Mm2 SINE B2 47 192 -3 4 1795 9211 93 9 28 chrX 158723421 158724791 -7925505 + Lx2 LINE L1 5651 6995 -2 4 1795 2066 110 89 3 chrX 158724833 158725160 -7925136 - Lx3C LINE L1 -486 6490 6136 4 1795 3171 152 32 0 chrX 158725160 158725665 -7924631 + Lx3C LINE L1 6445 6965 -11 4 1795 370 320 81 48 chrX 158726027 158726237 -7924059 - MIR SINE MIR -34 228 12 4 1795 270 0 0 0 chrX 158726249 158726279 -7924017 + (TAA)n Simple_repeat Simple_repeat 2 31 0 4 1795 2276 225 67 52 chrX 158726872 158727588 -7922708 - Lx5 LINE L1 -714 6759 5816 4 1795 1909 264 76 37 chrX 158727591 158728185 -7922111 + Lx5 LINE L1 6421 7037 -13 4 224 458 33 17 0 chrX 158728188 158728248 -7922048 + (TAGA)n Simple_repeat Simple_repeat 3 63 0 4 1796 333 303 0 0 chrX 158729091 158729180 -7921116 - L2a LINE L2 0 3426 3338 4 1796 320 332 9 35 chrX 158730906 158731107 -7919189 - MLT1H LTR MaLR -280 232 40 4 1796 24 0 0 0 chrX 158731644 158731668 -7918628 + AT_rich Low_complexity Low_complexity 1 24 0 4 1796 595 352 81 13 chrX 158731759 158732164 -7918132 - LTR33B LTR ERVL 0 503 23 4 1796 226 246 0 0 chrX 158732785 158732842 -7917454 + T-rich Low_complexity Low_complexity 1 57 0 4 1796 699 228 157 25 chrX 158733290 158733488 -7916808 + ID_B1 SINE B4 1 224 0 4 1796 732 273 201 20 chrX 158733551 158733958 -7916338 - L1ME4a LINE L1 -5 6119 5639 4 1796 46 19 0 0 chrX 158735457 158735510 -7914786 + AT_rich Low_complexity Low_complexity 1 53 0 4 1796 269 165 0 4 chrX 158735519 158735576 -7914720 + PB1D10 SINE Alu 67 142 -7 4 1796 347 0 0 23 chrX 158735665 158735709 -7914587 + (TAA)n Simple_repeat Simple_repeat 2 44 0 4 1796 1009 124 0 17 chrX 158735730 158735911 -7914385 + (GAA)n Simple_repeat Simple_repeat 2 179 0 4 1796 642 369 17 17 chrX 158735935 158736172 -7914124 + B4A SINE B4 46 282 -10 4 1796 714 269 88 5 chrX 158736928 158737122 -7913174 - ID_B1 SINE B4 -12 212 3 4 1796 31 26 0 0 chrX 158737436 158737474 -7912822 + AT_rich Low_complexity Low_complexity 1 38 0 4 1796 869 257 0 59 chrX 158737478 158737681 -7912615 - B3A SINE B2 -7 191 1 4 1796 344 355 16 11 chrX 158737984 158738166 -7912130 + L1MC4a LINE L1 5650 5832 -2050 4 1796 409 227 68 0 chrX 158738170 158738258 -7912038 + PB1D10 SINE Alu 18 111 -6 4 1796 202 294 0 0 chrX 158738313 158738381 -7911915 + (TA)n Simple_repeat Simple_repeat 1 68 0 4 1796 274 299 13 13 chrX 158738618 158738696 -7911600 - ID4 SINE ID -4 79 2 4 1796 1311 180 29 0 chrX 158738764 158738970 -7911326 - B3 SINE B2 -4 212 1 4 1796 540 294 116 42 chrX 158738993 158739234 -7911062 + Lx8 LINE L1 6385 6643 -830 4 1796 23 33 0 0 chrX 158739234 158739264 -7911032 + AT_rich Low_complexity Low_complexity 1 30 0 4 1796 833 328 62 12 chrX 158739319 158739578 -7910718 - B4A SINE B4 -20 272 1 4 1796 1771 239 20 18 chrX 158739578 158739970 -7910326 + Lx8 LINE L1 6630 7022 -451 4 1796 241 217 159 46 chrX 158740092 158740198 -7910098 + MLT1H LTR MaLR 364 549 0 4 1796 237 235 11 147 chrX 158740916 158741011 -7909285 - B1_Mur4 SINE Alu -25 125 44 4 1796 3520 59 5 2 chrX 158741016 158741443 -7908853 + L1_Mus1 LINE L1 6139 6566 -1 4 1796 231 239 22 0 chrX 158741491 158741537 -7908759 - B1F SINE Alu -102 47 1 4 1796 250 282 142 23 chrX 158741790 158742008 -7908288 + L2 LINE L2 2037 2280 -1139 4 1796 771 259 5 75 chrX 158742681 158742894 -7907402 - B3A SINE B2 0 198 1 4 1796 1178 196 70 13 chrX 158743006 158743234 -7907062 - 7SK RNA RNA -90 241 1 4 1796 993 280 108 75 chrX 158743204 158743659 -7906637 + MLT1D LTR MaLR 29 498 -7 4 1796 21 0 0 0 chrX 158744113 158744134 -7906162 + AT_rich Low_complexity Low_complexity 1 21 0 4 1796 641 359 51 29 chrX 158744721 158745071 -7905225 - L2 LINE L2 -2617 802 445 4 1796 381 345 91 24 chrX 158745193 158745438 -7904858 + MLT1G1 LTR MaLR 161 459 -120 4 1796 324 0 0 0 chrX 158746284 158746320 -7903976 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1796 1293 83 0 0 chrX 158746480 158746660 -7903636 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 4 1796 303 262 0 36 chrX 158746701 158746784 -7903512 - MER5A1 DNA MER1_type -9 157 78 4 1796 472 333 59 67 chrX 158746824 158747062 -7903234 + MIR SINE MIR 11 246 -16 4 1796 1304 181 0 0 chrX 158748137 158748353 -7901943 + B3 SINE B2 1 216 0 4 1796 737 265 77 0 chrX 158749312 158749493 -7900803 - RMER30 DNA MER1_type -7 195 1 4 1796 274 288 210 9 chrX 158750015 158750179 -7900117 + MIRc SINE MIR 28 223 -45 4 1796 330 325 145 58 chrX 158750270 158750649 -7899647 - LTR40b LTR ERVL -38 424 13 4 1796 1225 214 54 136 chrX 158750664 158751069 -7899227 + ORR1D1 LTR MaLR 1 372 -2 4 1796 378 0 0 0 chrX 158751326 158751368 -7898928 + (TTTTG)n Simple_repeat Simple_repeat 1 42 0 4 1796 1187 82 0 0 chrX 158751370 158751516 -7898780 - B1_Mus1 SINE Alu -1 147 2 4 1796 284 372 12 0 chrX 158752094 158752180 -7898116 + MTEa LTR MaLR 45 131 -248 4 1796 950 303 25 100 chrX 158752201 158752649 -7897647 - MTD LTR MaLR 0 419 6 4 1796 8037 62 0 4 chrX 158752699 158753833 -7896463 - L1Md_F2 LINE L1 0 6582 5454 4 1796 412 109 0 15 chrX 158753833 158753898 -7896398 - RMER19B LTR ERVK -19 883 820 4 1796 383 157 114 0 chrX 158753894 158753964 -7896332 + RMER19B LTR ERVK 62 139 -763 4 1796 766 283 94 94 chrX 158753961 158754355 -7895941 + MT2A LTR ERVL 135 528 -5 4 1796 285 278 81 65 chrX 158754437 158754560 -7895736 - LTR79 LTR ERVL -11 516 392 4 1796 764 156 88 6 chrX 158755249 158755430 -7894866 - Lx9 LINE L1 -1 7643 7448 4 1796 513 149 0 11 chrX 158755423 158755511 -7894785 + Lx9 LINE L1 7339 7425 -219 4 1796 1289 273 81 9 chrX 158755911 158756258 -7894038 + MTEb LTR MaLR 1 372 -7 4 1796 435 308 48 0 chrX 158756309 158756455 -7893841 + MLT1G3 LTR MaLR 4 156 -439 4 1796 261 57 0 0 chrX 158756479 158756514 -7893782 + (TC)n Simple_repeat Simple_repeat 1 35 0 4 1796 333 0 0 0 chrX 158756514 158756551 -7893745 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1796 764 299 0 35 chrX 158756583 158756781 -7893515 - B4 SINE B4 -8 284 94 4 1796 3774 54 15 68 chrX 158757135 158757676 -7892620 - MURVY-LTR LTR ERV1 -7 512 1 4 1796 810 336 64 10 chrX 158757782 158758064 -7892232 + MLT1H LTR MaLR 14 311 -238 4 1796 3066 12 0 27 chrX 158758064 158758400 -7891896 + IAPLTR2b LTR ERVK 1 327 0 4 1796 810 336 64 10 chrX 158758400 158758415 -7891881 + MLT1H LTR MaLR 312 326 -223 4 1796 962 108 27 87 chrX 158758415 158758598 -7891698 + IAPEz-int LTR ERVK 23 194 -6287 4 1796 242 250 0 0 chrX 158758608 158758652 -7891644 + RLTR27 LTR ERVK 232 275 -34 4 1796 905 52 17 0 chrX 158758652 158758768 -7891528 + IAPEz-int LTR ERVK 168 285 -6196 4 1796 7726 70 55 44 chrX 158758768 158759858 -7890438 + IAPEz-int LTR ERVK 211 1312 -5169 4 1796 21533 34 8 2 chrX 158759846 158762346 -7887950 + IAPEz-int LTR ERVK 3966 6479 -2 4 1796 3000 18 0 49 chrX 158762348 158762692 -7887604 + IAPLTR2b LTR ERVK 1 327 0 4 1796 373 235 0 24 chrX 158762719 158762802 -7887494 + ID4_ SINE ID 3 83 0 4 1796 600 239 37 37 chrX 158762864 158763025 -7887271 + MLT1H LTR MaLR 389 549 0 4 1796 495 0 0 0 chrX 158763570 158763625 -7886671 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 1796 37821 58 7 5 chrX 158763839 158770163 -7880133 - L1Md_F3 LINE L1 -1 6583 244 4 1796 229 297 13 39 chrX 158770194 158770271 -7880025 - MIRc SINE MIR -129 139 65 4 1796 327 296 37 0 chrX 158770649 158770730 -7879566 + MER58C DNA MER1_type 128 211 -4 4 1796 249 57 0 0 chrX 158770757 158770792 -7879504 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1796 2428 8 0 8 chrX 158770805 158771068 -7879228 - L1Md_T LINE L1 0 6582 6322 4 1796 213 373 13 0 chrX 158771094 158771169 -7879127 - ID_B1 SINE B4 -67 157 82 4 1796 1110 317 54 54 chrX 158771234 158771700 -7878596 - LTR16C LTR ERVL -17 472 7 4 1796 729 270 45 0 chrX 158772662 158772840 -7877456 - MLT1A0 LTR MaLR -18 347 162 4 1796 396 0 0 0 chrX 158772881 158772925 -7877371 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1796 908 221 110 78 chrX 158772934 158773189 -7877107 - B4A SINE B4 -28 264 2 4 1796 1158 87 29 6 chrX 158774210 158774384 -7875912 - URR1A DNA MER1_type 0 226 49 4 1796 1022 269 139 25 chrX 158774860 158775152 -7875144 - L1MD2 LINE L1 -21 6338 6017 4 1796 3352 63 2 17 chrX 158775152 158775558 -7874738 + MTB LTR MaLR 1 400 0 4 1796 1022 269 139 25 chrX 158775558 158775711 -7874585 - L1MD2 LINE L1 -343 6016 5842 4 1796 1349 63 6 0 chrX 158775715 158775889 -7874407 + MTA_Mm LTR MaLR 222 396 0 4 1796 345 355 45 40 chrX 158776452 158776574 -7873722 - RMER15 LTR ERVL -5 570 450 4 1796 3450 48 5 5 chrX 158776574 158776970 -7873326 - MTA_Mm LTR MaLR 0 396 1 4 1796 345 355 45 40 chrX 158776970 158777070 -7873226 - RMER15 LTR ERVL -126 449 347 4 1796 674 310 62 7 chrX 158777842 158778131 -7872165 + L1M5 LINE L1 5424 5728 -434 4 1796 492 124 27 45 chrX 158778181 158778291 -7872005 - L1Md_A LINE L1 -1 6581 6474 4 1796 468 188 0 0 chrX 158778292 158778372 -7871924 + B1_Mus1 SINE Alu 16 95 -53 4 1796 531 128 0 0 chrX 158778376 158778462 -7871834 + (GA)n Simple_repeat Simple_repeat 1 86 0 5 1796 276 111 48 0 chrX 158778847 158778910 -7871386 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 1796 203 245 0 20 chrX 158778910 158778960 -7871336 + G-rich Low_complexity Low_complexity 4 52 0 5 1796 453 19 0 0 chrX 158779025 158779079 -7871217 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 1796 972 276 83 78 chrX 158779111 158779729 -7870567 - L1ME1 LINE L1 -168 6176 5741 5 1796 287 328 11 0 chrX 158780221 158780333 -7869963 + MIR SINE MIR 2 116 -92 5 1796 1918 105 12 68 chrX 158780410 158780747 -7869549 - ORR1A3 LTR MaLR -8 318 1 5 1796 232 250 0 0 chrX 158780816 158780868 -7869428 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 1796 429 305 32 58 chrX 158780938 158781126 -7869170 - B3A SINE B2 -7 209 27 5 1796 5176 93 15 11 chrX 158781142 158781872 -7868424 - Lx2 LINE L1 -2 6995 6263 5 1796 2750 113 9 23 chrX 158781872 158782306 -7867990 + Lx2 LINE L1 5809 6236 -761 5 1796 184 296 170 43 chrX 158782710 158782851 -7867445 - MIR SINE MIR -65 203 42 5 1796 1531 199 42 18 chrX 158782864 158783197 -7867099 - MTEa LTR MaLR -38 341 1 5 1796 232 242 14 108 chrX 158783624 158783698 -7866598 - MLT1H2 LTR MaLR -134 355 289 5 1796 246 265 70 20 chrX 158784284 158784384 -7865912 + MIR SINE MIR 102 206 -56 5 1796 369 286 18 45 chrX 158784537 158784647 -7865649 + PB1D10 SINE Alu 1 107 -10 5 1796 461 158 0 10 chrX 158784647 158784731 -7865565 + GA-rich Low_complexity Low_complexity 1 84 0 5 1796 1020 133 0 0 chrX 158784731 158784911 -7865385 + (GGA)n Simple_repeat Simple_repeat 1 180 0 5 1796 461 158 0 10 chrX 158784911 158784928 -7865368 + polypurine Low_complexity Low_complexity 85 101 0 5 1796 1382 50 6 0 chrX 158784932 158785111 -7865185 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 5 1796 563 305 110 30 chrX 158785129 158785393 -7864903 + B4A SINE B4 2 286 -6 5 1796 770 214 0 8 chrX 158785408 158785665 -7864631 + (CATATA)n Simple_repeat Simple_repeat 1 254 0 5 1796 480 336 75 24 chrX 158786677 158786967 -7863329 + MLT1H LTR MaLR 12 363 -186 5 1796 242 294 63 32 chrX 158786979 158787074 -7863222 + MLT1H LTR MaLR 437 534 -15 5 1796 224 349 0 0 chrX 158787230 158787313 -7862983 - L2b LINE L2 -211 3164 3082 5 1796 2664 148 128 8 chrX 158787892 158788369 -7861927 - RMER1A Other Other -1 1029 496 5 1796 1581 258 19 11 chrX 158788361 158788734 -7861562 - RMER1B Other Other -680 386 11 5 1796 326 299 0 17 chrX 158789257 158789361 -7860935 + ID4 SINE ID 2 99 -53 5 1796 198 91 0 0 chrX 158789455 158789488 -7860808 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1796 220 244 12 49 chrX 158790574 158790656 -7859640 + GA-rich Low_complexity Low_complexity 4 82 0 5 1796 249 33 0 0 chrX 158791804 158791834 -7858462 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 5 1796 241 309 26 43 chrX 158792587 158792702 -7857594 - MIRb SINE MIR -132 136 24 5 1796 225 0 0 0 chrX 158792721 158792746 -7857550 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 5 1796 752 0 11 0 chrX 158792800 158792888 -7857408 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 5 1796 1315 149 28 14 chrX 158793839 158794057 -7856239 + URR1B DNA MER1_type 5 225 0 5 1796 980 355 75 22 chrX 158794111 158794621 -7855675 - MLT1G1 LTR MaLR -36 543 7 5 1796 877 159 184 5 chrX 158795292 158795482 -7854814 - URR1B DNA MER1_type 0 225 2 5 1796 324 0 0 0 chrX 158797989 158798025 -7852271 + (CAG)n Simple_repeat Simple_repeat 1 36 0 5 1796 195 42 0 0 chrX 158798043 158798067 -7852229 + (CTG)n Simple_repeat Simple_repeat 3 26 0 5 1796 356 259 44 78 chrX 158798300 158798480 -7851816 + MER5B DNA MER1_type 5 178 0 5 1796 641 100 0 9 chrX 158798493 158798604 -7851692 - L1_Mus3 LINE L1 0 6638 6529 5 1796 867 237 76 0 chrX 158798847 158799045 -7851251 - B3 SINE B2 -3 213 1 5 1796 28 91 0 0 chrX 158799078 158799155 -7851141 + AT_rich Low_complexity Low_complexity 1 77 0 5 1796 21 57 0 0 chrX 158799194 158799229 -7851067 + AT_rich Low_complexity Low_complexity 1 35 0 5 1796 486 235 21 70 chrX 158799978 158800120 -7850176 + MLT1E1 LTR MaLR 518 652 -2 5 1796 246 174 0 0 chrX 158801902 158801948 -7848348 + (CAT)n Simple_repeat Simple_repeat 3 48 0 5 1796 542 314 51 0 chrX 158801969 158802125 -7848171 + RSINE1 SINE B4 2 165 0 5 1796 920 155 7 7 chrX 158802346 158802495 -7847801 + B1_Mur4 SINE Alu 2 150 0 5 1796 3183 259 83 29 chrX 158802525 158803098 -7847198 + Lx8 LINE L1 6188 6794 -679 5 1796 947 149 0 0 chrX 158803098 158803246 -7847050 - B1_Mus1 SINE Alu 0 148 1 5 1796 3183 259 83 29 chrX 158803246 158803585 -7846711 + Lx8 LINE L1 6795 7150 -323 5 1796 1585 247 8 34 chrX 158803802 158804183 -7846113 + Lx5 LINE L1 6657 7027 -23 5 1796 674 255 117 45 chrX 158805051 158805359 -7844937 + Lx8 LINE L1 7144 7473 0 5 1796 2711 139 2 2 chrX 158805552 158805969 -7844327 - MTC LTR MaLR -4 417 1 5 1796 372 143 0 0 chrX 158806015 158806085 -7844211 + (TC)n Simple_repeat Simple_repeat 1 70 0 5 1796 453 50 0 0 chrX 158806087 158806147 -7844149 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1796 213 318 91 0 chrX 158806498 158806564 -7843732 - B3A SINE B2 -126 72 1 5 1796 270 106 0 0 chrX 158806705 158806752 -7843544 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 1796 707 259 37 52 chrX 158806756 158807016 -7843280 - L1MA4 LINE L1 -393 5907 5647 5 1796 646 241 0 21 chrX 158807018 158807162 -7843134 + B3A SINE B2 2 142 -56 5 1796 195 100 0 0 chrX 158807178 158807208 -7843088 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 1796 679 359 127 13 chrX 158807481 158807868 -7842428 - LTR16E1 LTR ERVL -107 431 1 5 1796 1181 229 98 29 chrX 158808241 158808587 -7841709 - ORR1C2 LTR MaLR -14 370 1 5 1796 218 133 44 0 chrX 158808668 158808713 -7841583 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1796 981 282 51 131 chrX 158808877 158809207 -7841089 - MTE2a LTR MaLR 0 379 62 5 1796 1268 138 70 14 chrX 158809207 158809420 -7840876 - URR1B DNA MER1_type 0 225 1 5 1796 981 282 51 131 chrX 158809420 158809501 -7840795 - MTE2a LTR MaLR -318 61 1 5 1796 659 311 54 57 chrX 158809501 158809778 -7840518 + B4 SINE B4 16 291 -1 5 1796 351 0 0 0 chrX 158809974 158810013 -7840283 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1796 360 225 56 0 chrX 158810180 158810269 -7840027 - L1ME4a LINE L1 -77 6047 5954 5 1796 1649 169 92 14 chrX 158810581 158810928 -7839368 + ORR1D1 LTR MaLR 1 374 0 5 1796 262 45 45 0 chrX 158811139 158811183 -7839113 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 5 1796 2133 62 3 10 chrX 158811837 158812149 -7838147 + RLTR10A LTR ERVK 4 313 -98 5 1796 502 146 0 11 chrX 158812150 158812240 -7838056 + MMERVK10C-int LTR ERVK 7493 7581 0 5 1796 2030 122 16 7 chrX 158812240 158812546 -7837750 + RLTR27 LTR ERVK 1 309 0 5 1796 386 351 12 6 chrX 158812562 158812615 -7837681 + polypyrimidine Low_complexity Low_complexity 119 171 0 5 1796 4093 48 2 12 chrX 158812615 158813122 -7837174 - L1Md_F2 LINE L1 0 6582 6081 5 1796 386 351 12 6 chrX 158813122 158813237 -7837059 + polypyrimidine Low_complexity Low_complexity 3 118 0 5 1796 811 280 80 4 chrX 158813384 158813635 -7836661 + B4A SINE B4 2 271 -21 5 1796 259 314 23 0 chrX 158813659 158813745 -7836551 + GA-rich Low_complexity Low_complexity 3 90 0 5 1796 360 0 0 0 chrX 158814560 158814600 -7835696 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1796 748 278 77 19 chrX 158814624 158814936 -7835360 - Lx9 LINE L1 -90 7554 7225 5 1796 9317 97 23 10 chrX 158814958 158816282 -7834014 - Lx2 LINE L1 0 6997 5657 5 1796 5333 136 34 7 chrX 158816264 158817151 -7833145 + Lx2 LINE L1 4760 5670 -207 5 1796 3340 245 38 27 chrX 158817152 158817244 -7833052 - Lx9 LINE L1 -452 7192 7106 5 1796 3021 56 25 8 chrX 158817244 158817637 -7832659 - MTB LTR MaLR 0 400 1 5 1796 3340 245 38 27 chrX 158817637 158818369 -7831927 - Lx9 LINE L1 -539 7105 6359 5 1796 669 110 0 0 chrX 158818370 158818470 -7831826 + (TG)n Simple_repeat Simple_repeat 2 101 0 5 1796 2203 197 4 26 chrX 158818674 158819178 -7831118 + Lx9 LINE L1 5429 5956 -1688 5 1796 386 139 12 0 chrX 158819185 158819271 -7831025 + (TTG)n Simple_repeat Simple_repeat 1 87 0 5 1796 421 291 9 0 chrX 158819271 158819381 -7830915 - PB1D10 SINE Alu -6 111 1 5 1796 23005 23 0 1 chrX 158819469 158822782 -7827514 - L1Md_A LINE L1 -1 6581 3270 5 1796 456 151 10 41 chrX 158822791 158822888 -7827408 - B2_Mm2 SINE B2 -9 186 93 5 1796 2252 47 10 3 chrX 158822886 158823185 -7827111 - ORR1A1 LTR MaLR -45 301 1 5 1796 291 339 26 35 chrX 158823191 158823307 -7826989 - B4A SINE B4 -130 162 48 5 1796 205 109 43 0 chrX 158823335 158823381 -7826915 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 5 1796 2691 270 47 116 chrX 158823446 158823678 -7826618 - L1M4 LINE L1 -5270 1272 1053 5 1796 302 203 15 15 chrX 158823678 158823743 -7826553 - ID4 SINE ID -17 66 2 5 1796 2691 270 47 116 chrX 158823743 158824778 -7825518 - L1M4 LINE L1 -5490 1052 92 5 1796 433 334 86 43 chrX 158824956 158825281 -7825015 + MLT1H LTR MaLR 29 367 -182 5 1796 1216 42 0 0 chrX 158826477 158826619 -7823677 - B1_Mm SINE Alu -5 142 1 5 1796 265 319 9 76 chrX 158827548 158827758 -7822538 + L1_Rod LINE L1 507 702 -6470 5 1796 35829 82 5 13 chrX 158827823 158832925 -7817371 + L1Md_F2 LINE L1 242 5292 -591 5 1796 2450 47 13 26 chrX 158832925 158833233 -7817063 + L1Md_F3 LINE L1 6281 6584 0 5 1796 9586 61 2 19 chrX 158833233 158833539 -7816757 + L1Md_F2 LINE L1 5293 5586 -297 5 1796 8345 50 9 4 chrX 158833539 158834529 -7815767 + L1Md_F2 LINE L1 5587 6581 -1 5 1796 432 325 0 8 chrX 158835311 158835435 -7814861 + ORR1E LTR MaLR 5 127 -232 5 1796 297 381 75 6 chrX 158835541 158835715 -7814581 + LTR16C LTR ERVL 295 480 -9 5 1796 777 243 26 26 chrX 158835902 158836096 -7814200 + B3A SINE B2 1 194 -4 5 1796 860 184 132 21 chrX 158836099 158836288 -7814008 + B3 SINE B2 2 211 -5 5 1796 461 354 93 19 chrX 158836915 158837174 -7813122 + MLT1H LTR MaLR 256 533 -16 5 1796 422 349 152 37 chrX 158837326 158837583 -7812713 - MLT2F LTR ERVL -181 482 200 5 1796 6812 102 3 4 chrX 158837583 158838495 -7811801 + Lx2 LINE L1 6086 6996 -1 5 1796 422 349 152 37 chrX 158838495 158838666 -7811630 - MLT2F LTR ERVL -464 199 5 5 1796 612 0 0 0 chrX 158838842 158838910 -7811386 + (TCC)n Simple_repeat Simple_repeat 3 70 0 6 1796 266 326 34 75 chrX 158839020 158839166 -7811130 + LTR90B LTR LTR 656 795 -1 6 1796 2265 209 14 5 chrX 158839176 158839599 -7810697 + Lx6 LINE L1 6991 7417 -43 6 1796 258 162 43 14 chrX 158839604 158839673 -7810623 + A-rich Low_complexity Low_complexity 1 71 0 6 1796 678 270 176 92 chrX 158841011 158841521 -7808775 - MLT1E1A LTR MaLR -3 677 125 6 1796 1122 293 248 58 chrX 158841561 158842652 -7807644 - MLT1E1A-int LTR MaLR -2 1487 189 6 1796 203 304 111 53 chrX 158843179 158843331 -7806965 - MIR SINE MIR -106 156 2 6 1796 405 0 0 0 chrX 158843979 158844024 -7806272 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1796 463 323 47 25 chrX 158844031 158844307 -7805989 - L1M5 LINE L1 -893 5253 4972 6 1796 910 210 15 24 chrX 158844306 158844511 -7805785 + Lx6 LINE L1 7081 7283 -177 6 1796 388 295 15 15 chrX 158844583 158844714 -7805582 + Lx7 LINE L1 7189 7319 -377 6 1796 518 271 85 48 chrX 158844952 158845200 -7805096 - L1M5 LINE L1 -1180 4966 4710 6 1796 604 245 89 13 chrX 158845634 158845791 -7804505 - MER20 DNA MER1_type -1 218 50 6 1796 261 321 96 24 chrX 158846024 158846107 -7804189 + MER91C DNA Tip100 33 121 -19 6 1796 326 276 82 114 chrX 158846218 158846402 -7803894 + LTR85a LTR Gypsy? 495 672 -30 6 1796 387 319 119 29 chrX 158846552 158846762 -7803534 + MER97c DNA MER1_type? 2 230 -860 6 1796 455 48 16 0 chrX 158846773 158846835 -7803461 + (TC)n Simple_repeat Simple_repeat 1 63 0 6 1796 441 0 0 0 chrX 158846835 158846884 -7803412 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1796 198 0 0 0 chrX 158847308 158847330 -7802966 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 6 1796 2326 128 69 11 chrX 158847442 158847789 -7802507 + ORR1B2 LTR MaLR 1 367 0 6 1796 649 23 23 0 chrX 158847838 158847925 -7802371 + (TA)n Simple_repeat Simple_repeat 1 89 0 6 1796 1748 189 94 56 chrX 158848378 158848804 -7801492 - RMER10A LTR ERVL 0 442 1 6 1796 233 350 0 0 chrX 158848918 158848978 -7801318 - ORR1E LTR MaLR -256 103 44 6 1796 686 223 268 0 chrX 158849139 158849431 -7800865 + MTE2a LTR MaLR 1 371 -8 6 1796 577 224 23 23 chrX 158849497 158849625 -7800671 - B1F SINE Alu -3 146 19 6 1796 209 163 0 23 chrX 158849966 158850010 -7800286 - L4 LINE RTE -1678 351 309 6 1796 509 0 16 0 chrX 158853109 158853170 -7797126 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 1796 297 208 125 0 chrX 158853205 158853277 -7797019 + ID4 SINE ID 2 82 -1 6 1796 198 0 0 0 chrX 158853697 158853719 -7796577 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 6 1796 306 261 14 42 chrX 158855090 158855162 -7795134 - ID4_ SINE ID -2 81 12 6 1796 250 393 0 0 chrX 158855187 158855276 -7795020 - PB1D10 SINE Alu -9 108 20 6 1796 2845 121 13 0 chrX 158856173 158856562 -7793734 - ORR1B1 LTR MaLR 0 394 1 6 1796 206 305 162 93 chrX 158856761 158857137 -7793159 - L2a LINE L2 0 3426 3025 6 1796 782 286 28 23 chrX 158857168 158857383 -7792913 + ID_B1 SINE B4 9 224 0 6 1796 647 288 81 12 chrX 158857550 158857796 -7792500 - L1M5 LINE L1 -622 5557 5295 6 1796 2924 255 84 20 chrX 158857828 158858724 -7791572 - Lx7 LINE L1 -17 7679 6727 6 224 1439 290 92 52 chrX 158858730 158859701 -7790595 - L1MD LINE L1 -849 5297 4288 6 1797 568 358 51 17 chrX 158859850 158860259 -7790037 + L1M5 LINE L1 4560 4982 -1164 6 1797 768 86 9 0 chrX 158860282 158860387 -7789909 + B2_Mm2 SINE B2 2 107 -88 6 1797 26 0 0 0 chrX 158860508 158860534 -7789762 + AT_rich Low_complexity Low_complexity 1 26 0 6 1797 1738 166 19 13 chrX 158860685 158860996 -7789300 + ORR1D1 LTR MaLR 62 374 0 6 1797 304 69 69 0 chrX 158861003 158861061 -7789235 + (TCTCTG)n Simple_repeat Simple_repeat 3 64 0 6 1797 471 18 0 0 chrX 158861061 158861117 -7789179 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 1797 1223 49 28 0 chrX 158861155 158861298 -7788998 - B1_Mus1 SINE Alu 0 148 2 6 1797 790 123 8 16 chrX 158861301 158861425 -7788871 - B1_Mur4 SINE Alu -1 149 27 6 1797 1183 280 83 15 chrX 158861505 158861914 -7788382 + Lx8 LINE L1 6917 7353 -120 6 1797 7844 70 5 10 chrX 158861898 158863137 -7787159 + L1_Mus1 LINE L1 5354 6565 -2 6 1797 752 284 113 36 chrX 158863131 158863577 -7786719 + L1ME2z LINE L1 5675 6162 -282 6 1797 3378 46 13 10 chrX 158863577 158863972 -7786324 + MTA_Mm LTR MaLR 1 396 0 6 1797 752 284 113 36 chrX 158863972 158863993 -7786303 + L1ME2z LINE L1 6163 6178 -266 6 1797 223 189 231 51 chrX 158863997 158864075 -7786221 + B1_Mur2 SINE Alu 58 149 0 6 1797 381 324 93 6 chrX 158864077 158864260 -7786036 + L1ME2z LINE L1 6180 6378 -66 6 1797 328 213 134 31 chrX 158864415 158864512 -7785784 + PB1D10 SINE Alu 7 113 -4 6 1797 897 10 0 0 chrX 158864563 158864665 -7785631 + (GA)n Simple_repeat Simple_repeat 1 102 0 6 1797 627 288 125 33 chrX 158864785 158865122 -7785174 + MLT1C LTR MaLR 34 401 -66 6 1797 1354 20 0 0 chrX 158866007 158866154 -7784142 - B1_Mus2 SINE Alu 0 147 1 6 1797 239 325 39 31 chrX 158866445 158866575 -7783721 + MER94 DNA AcHobo 1 131 -3 6 1797 367 211 0 38 chrX 158866871 158866950 -7783346 - B4 SINE B4 -209 83 8 6 1797 261 139 0 0 chrX 158867140 158867183 -7783113 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1797 363 44 0 0 chrX 158867183 158867228 -7783068 + (GA)n Simple_repeat Simple_repeat 1 45 0 6 1797 12143 14 1 1 chrX 158868020 158870134 -7780162 - L1Md_T LINE L1 0 6582 4494 6 1797 183 138 33 33 chrX 158870350 158870410 -7779886 + (TTG)n Simple_repeat Simple_repeat 2 61 0 6 1797 385 182 25 49 chrX 158870750 158870831 -7779465 - ID4 SINE ID -3 80 2 6 1797 1213 226 58 115 chrX 158870890 158871290 -7779006 - MTE2a LTR MaLR -2 377 1 6 1797 34 0 0 0 chrX 158871630 158871664 -7778632 + AT_rich Low_complexity Low_complexity 1 34 0 6 1797 590 218 82 15 chrX 158871671 158871806 -7778490 + B1F SINE Alu 1 144 -5 6 1797 308 321 6 70 chrX 158872643 158872814 -7777482 - MER105 DNA DNA -42 162 3 6 1797 330 265 10 10 chrX 158873076 158873179 -7777117 + L1MB7 LINE L1 4902 5004 -1142 6 1797 356 250 5 127 chrX 158873228 158873287 -7777009 + MT2B LTR ERVL 107 151 -433 6 1797 743 241 7 0 chrX 158873287 158873432 -7776864 + B1_Mur1 SINE Alu 1 146 -3 6 1797 1222 200 140 23 chrX 158873440 158873721 -7776575 + L1MB7 LINE L1 5160 5481 -703 6 1797 2247 137 90 18 chrX 158873721 158874109 -7776187 + Lx9 LINE L1 7225 7640 -4 6 1797 1222 260 60 36 chrX 158874109 158874434 -7775862 + L1MB7 LINE L1 5482 5807 -377 6 1797 3575 159 2 25 chrX 158874436 158875073 -7775223 + L1VL4 LINE L1 212 833 -5469 6 1797 991 254 123 17 chrX 158875065 158875422 -7774874 + L1MB7 LINE L1 5790 6184 0 6 1797 1338 129 113 5 chrX 158877078 158877281 -7773015 + URR1A DNA MER1_type 1 225 -1 6 1797 425 243 40 93 chrX 158878576 158878726 -7771570 - B2_Mm2 SINE B2 -53 142 1 6 1797 603 218 137 0 chrX 158879448 158879572 -7770724 + B3A SINE B2 2 142 -56 6 1797 387 0 0 0 chrX 158879573 158879616 -7770680 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1797 328 309 44 151 chrX 158879794 158880019 -7770277 - Tigger9a DNA Tigger -531 201 1 6 1797 771 228 12 25 chrX 158880382 158880544 -7769752 - RSINE1 SINE B4 -2 163 4 6 1797 307 270 68 0 chrX 158880562 158880636 -7769660 - ID4_ SINE ID -3 80 2 6 1797 269 333 160 23 chrX 158880823 158880998 -7769298 - MIRb SINE MIR -34 234 36 6 1797 275 338 99 47 chrX 158881118 158881351 -7768945 - L2b LINE L2 -52 3323 3079 6 1797 1855 166 212 6 chrX 158881404 158881753 -7768543 + MTC LTR MaLR 1 421 0 6 1797 2049 139 115 3 chrX 158881841 158882181 -7768115 - ORR1C1 LTR MaLR 0 378 1 6 1797 224 135 58 0 chrX 158883498 158883550 -7766746 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 1797 301 370 0 10 chrX 158883749 158883850 -7766446 - RMER15 LTR ERVL -105 470 371 6 1797 1832 259 19 31 chrX 158883855 158884334 -7765962 - Lx8 LINE L1 -247 7226 6754 6 1797 1068 188 96 5 chrX 158884340 158884538 -7765758 + B3 SINE B2 1 216 0 6 1797 598 309 153 33 chrX 158884944 158885335 -7764961 + LTR16A1 LTR ERVL 16 453 -3 6 1797 470 259 132 25 chrX 158885406 158885667 -7764629 + MLT1F1 LTR MaLR 173 485 -84 6 1797 249 320 55 16 chrX 158885960 158886087 -7764209 - L2b LINE L2 -495 2924 2793 6 1797 274 253 101 0 chrX 158886201 158886280 -7764016 + PB1D10 SINE Alu 47 149 0 6 1797 325 269 269 17 chrX 158886646 158886821 -7763475 - MER58A DNA MER1_type -9 215 1 6 1797 1582 203 63 19 chrX 158887119 158887435 -7762861 + MTC LTR MaLR 1 330 -91 6 1797 1872 171 19 19 chrX 158887443 158887765 -7762531 - ORR1D1 LTR MaLR -52 322 1 6 1797 485 148 79 11 chrX 158887765 158887854 -7762442 + MTC LTR MaLR 324 418 -3 6 1797 662 311 0 6 chrX 158887889 158888054 -7762242 + RSINE1 SINE B4 2 165 0 6 1797 269 361 25 25 chrX 158888440 158888602 -7761694 + MER5B DNA MER1_type 1 162 -16 6 1797 961 112 249 17 chrX 158888936 158889109 -7761187 + B3 SINE B2 3 215 -1 6 1797 191 347 80 0 chrX 158889443 158889518 -7760778 + MIRm SINE MIR 145 225 -51 6 1797 337 305 116 8 chrX 158889669 158889798 -7760498 + MIRb SINE MIR 109 251 -17 6 1797 982 217 64 5 chrX 158890889 158891093 -7759203 + B3 SINE B2 1 216 0 6 1797 990 162 0 0 chrX 158891101 158891249 -7759047 + B1_Mur1 SINE Alu 2 149 0 6 1797 344 284 79 33 chrX 158891318 158891558 -7758738 + L1ME3A LINE L1 5565 5815 -358 6 1797 386 315 66 28 chrX 158891583 158891870 -7758426 + L1ME3A LINE L1 5872 6169 -4 6 1797 495 214 0 10 chrX 158892817 158892916 -7757380 + PB1D10 SINE Alu 20 117 0 6 1797 226 237 85 0 chrX 158892932 158892991 -7757305 + ID4 SINE ID 2 65 -18 6 1797 378 362 92 3 chrX 158893189 158893384 -7756912 - MIR SINE MIR -24 238 36 6 1797 21 0 0 0 chrX 158893966 158893987 -7756309 + AT_rich Low_complexity Low_complexity 1 21 0 7 1797 1334 186 54 115 chrX 158894047 158894437 -7755859 + ORR1D2 LTR MaLR 5 370 0 7 1797 266 304 171 16 chrX 158894438 158894625 -7755671 + MIR SINE MIR 1 216 -46 7 1797 446 114 13 0 chrX 158895435 158895514 -7754782 + (CA)n Simple_repeat Simple_repeat 1 80 0 7 1797 235 250 16 32 chrX 158895677 158895739 -7754557 + Tigger5 DNA MER2_type 4 64 -2342 7 1797 516 182 48 24 chrX 158895746 158895870 -7754426 + Tigger5 DNA MER2_type 2144 2270 -136 7 1797 2500 147 42 20 chrX 158896102 158896553 -7753743 + Lx4B LINE L1 6581 7041 -17 7 1797 333 100 0 0 chrX 158896554 158896604 -7753692 + (TTAA)n Simple_repeat Simple_repeat 3 52 0 7 1797 335 286 63 63 chrX 158896826 158896968 -7753328 + B3 SINE B2 75 216 0 7 1797 306 377 104 30 chrX 158897154 158897452 -7752844 + HAL1 LINE L1 1305 1624 -883 7 1797 260 333 52 41 chrX 158898324 158898401 -7751895 - Lx9 LINE L1 -54 7419 7335 7 1797 471 18 0 0 chrX 158898401 158898457 -7751839 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 1797 393 279 3 2 chrX 158898457 158898573 -7751723 - Lx9 LINE L1 -178 7466 7358 7 1797 573 100 0 0 chrX 158898585 158898675 -7751621 + (TC)n Simple_repeat Simple_repeat 1 90 0 7 1797 2256 261 115 30 chrX 158898678 158899486 -7750810 - Lx9 LINE L1 -291 7353 6477 7 1797 425 289 51 19 chrX 158899521 158899736 -7750560 + Lx9 LINE L1 5830 6051 -1593 7 1797 306 0 0 0 chrX 158899888 158899922 -7750374 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1797 592 276 31 31 chrX 158900829 158901020 -7749276 + B3A SINE B2 3 193 -5 7 1797 405 0 0 0 chrX 158901087 158901132 -7749164 + (TATG)n Simple_repeat Simple_repeat 4 48 0 7 1797 2259 143 96 9 chrX 158901515 158901975 -7748321 + L1VL4 LINE L1 141 847 -5455 7 1797 17682 140 10 6 chrX 158901978 158902474 -7747822 + L1_Mus4 LINE L1 2748 3249 -2634 7 1797 216 0 0 0 chrX 158902474 158902498 -7747798 + (CAA)n Simple_repeat Simple_repeat 1 24 0 7 1797 17682 117 13 7 chrX 158902498 158905850 -7744446 + L1_Mus4 LINE L1 3250 6620 -16 7 1797 3283 26 23 3 chrX 158905850 158906238 -7744058 - MTA_Mm LTR MaLR 0 396 1 7 1797 7350 65 18 10 chrX 158906238 158906253 -7744043 + L1_Mus4 LINE L1 6621 6630 -6 7 1797 342 0 0 0 chrX 158906409 158906447 -7743849 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 7 1797 311 253 0 12 chrX 158906909 158906989 -7743307 - ID4 SINE ID -3 80 2 7 1797 292 326 47 34 chrX 158907718 158907867 -7742429 + MER103 DNA DNA 9 159 -7 7 1797 330 339 87 12 chrX 158908557 158908730 -7741566 + MIR SINE MIR 63 248 -14 7 1797 306 0 0 0 chrX 158909983 158910017 -7740279 + (TA)n Simple_repeat Simple_repeat 1 34 0 7 1797 299 258 87 43 chrX 158910017 158910155 -7740141 + Lx9 LINE L1 5761 5904 -1740 7 1797 1390 244 113 15 chrX 158911132 158911590 -7738706 + Lx8 LINE L1 6963 7465 -8 7 1797 255 250 23 171 chrX 158912068 158912285 -7738011 + L1MEc LINE L1 44 228 -6172 7 1797 225 328 44 66 chrX 158912380 158912517 -7737779 + MT2B LTR ERVL 111 244 -357 7 1797 464 250 10 20 chrX 158912442 158912540 -7737756 + PB1D7 SINE Alu 14 110 -10 7 1797 280 293 132 25 chrX 158912582 158912862 -7737434 - L1MEg LINE L1 -2151 3995 3686 7 1797 1333 205 101 54 chrX 158913065 158913460 -7736836 + MT2B LTR ERVL 163 598 -3 7 1797 23 54 0 0 chrX 158913598 158913635 -7736661 + AT_rich Low_complexity Low_complexity 1 37 0 7 1797 4330 51 0 0 chrX 158913679 158914207 -7736089 + L1Md_T LINE L1 6054 6581 -1 7 1797 1060 87 0 0 chrX 158914233 158914371 -7735925 + B1_Mus1 SINE Alu 5 142 -6 7 1797 332 287 46 8 chrX 158914515 158914645 -7735651 - L1MEg LINE L1 -4742 1500 1366 7 1797 242 253 181 19 chrX 158914870 158914895 -7735401 - L1MEg LINE L1 -5235 901 877 7 1797 185 0 40 0 chrX 158914895 158914920 -7735376 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 1797 1179 75 0 0 chrX 158914930 158915077 -7735219 - B1_Mus2 SINE Alu 0 147 1 7 1797 401 280 82 15 chrX 158915087 158915221 -7735075 - B1F SINE Alu -6 143 1 7 1797 242 253 181 19 chrX 158915221 158915439 -7734857 - L1MEg LINE L1 -5280 856 594 7 1797 275 332 93 12 chrX 158915726 158915785 -7734511 + HAL1 LINE L1 645 704 -1803 7 1797 318 67 0 0 chrX 158915785 158915830 -7734466 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 7 1797 275 332 93 12 chrX 158915830 158916017 -7734279 + HAL1 LINE L1 705 910 -1597 7 1797 216 339 62 96 chrX 158916083 158916292 -7734004 - L2a LINE L2 -4 3422 3221 7 1797 459 156 32 32 chrX 158916299 158916425 -7733871 + HAL1 LINE L1 1023 1148 -1359 7 1797 387 321 75 33 chrX 158916436 158916771 -7733525 + HAL1 LINE L1 1231 1579 -928 7 1797 953 304 92 27 chrX 158916786 158917121 -7733175 + ORR1E LTR MaLR 3 359 0 7 1797 4512 302 48 66 chrX 158917127 158918679 -7731617 + ORR1E-int LTR MaLR 5 1528 -52 7 1797 1043 286 46 34 chrX 158918679 158919030 -7731266 + ORR1E LTR MaLR 1 355 -4 7 1797 379 369 147 8 chrX 158919084 158919322 -7730974 + HAL1 LINE L1 1673 1943 -564 7 1797 1458 32 20 64 chrX 158919490 158919692 -7730604 + B2_Mm1a SINE B2 1 193 0 7 1797 21 0 0 0 chrX 158919692 158919713 -7730583 + AT_rich Low_complexity Low_complexity 1 21 0 7 1797 426 173 4 107 chrX 158920063 158920315 -7729981 + RMER17D LTR ERVK 242 502 -387 7 1797 183 156 0 0 chrX 158920742 158920774 -7729522 + GA-rich Low_complexity Low_complexity 2 33 0 7 1797 3573 113 4 122 chrX 158921037 158921779 -7728517 + RMER6A LTR ERVK 57 756 0 7 1797 5780 48 0 3 chrX 158921963 158922665 -7727631 - L1Md_F2 LINE L1 -12 6570 5871 7 1797 644 12 0 0 chrX 158922668 158922750 -7727546 + L1Md_F LINE L1 758 839 -5680 7 1797 293 300 48 48 chrX 158922885 158922931 -7727365 + PB1D7 SINE Alu 13 63 -57 7 1797 180 0 0 0 chrX 158922931 158922951 -7727345 + (CATA)n Simple_repeat Simple_repeat 1 20 0 7 1797 293 300 48 48 chrX 158922951 158923009 -7727287 + PB1D7 SINE Alu 64 116 -4 7 1797 1192 65 0 0 chrX 158923686 158923841 -7726455 - L1_Mus2 LINE L1 -1 6565 6411 7 1797 197 360 0 0 chrX 158923913 158923963 -7726333 - MIR3 SINE MIR -48 160 111 7 1797 2067 125 0 59 chrX 158924300 158924639 -7725657 - ORR1A2 LTR MaLR -8 319 1 7 1797 379 243 0 51 chrX 158924639 158924713 -7725583 + RSINE1 SINE B4 22 91 -74 7 1797 722 214 7 52 chrX 158924750 158924903 -7725393 + RSINE1 SINE B4 3 148 -17 7 1797 1104 320 98 60 chrX 158924944 158925732 -7724564 + Lx8 LINE L1 6654 7471 -2 7 1797 24 32 0 0 chrX 158925732 158925763 -7724533 + AT_rich Low_complexity Low_complexity 1 31 0 7 1797 500 280 38 95 chrX 158925769 158925927 -7724369 + B3A SINE B2 35 192 -6 7 1797 717 308 58 12 chrX 158925939 158926268 -7724028 + L1M4 LINE L1 4767 5110 -1036 7 1797 1288 98 168 0 chrX 158927396 158927610 -7722686 + RMER19A LTR ERVK 1 250 -487 7 1797 2275 108 28 0 chrX 158927604 158927929 -7722367 + RMER19A LTR ERVK 404 737 0 7 1797 391 324 28 21 chrX 158927967 158928109 -7722187 + MER63A DNA AcHobo 1 143 -67 7 1797 232 179 71 0 chrX 158928346 158928402 -7721894 + L1MC5 LINE L1 7305 7364 -597 7 1797 326 297 76 25 chrX 158928504 158928701 -7721595 + L1MC5 LINE L1 7459 7665 -296 7 1797 1483 68 5 0 chrX 158929077 158929268 -7721028 - B2_Mm1t SINE B2 -1 192 1 7 1797 373 270 163 33 chrX 158930276 158930460 -7719836 - CYRA11_Mm Unknown Y-chromosome -236 381 174 7 1797 792 136 21 21 chrX 158930321 158930464 -7719832 + URR1B DNA MER1_type 83 225 0 7 1797 403 289 97 21 chrX 158930785 158930930 -7719366 + MIRb SINE MIR 93 248 -20 7 1797 678 303 47 51 chrX 158931282 158931755 -7718541 + L1M4 LINE L1 4283 4753 -1393 7 1797 334 219 31 0 chrX 158931751 158931847 -7718449 + Lx9 LINE L1 7540 7638 -6 7 1797 721 215 175 0 chrX 158931858 158932035 -7718261 + B3 SINE B2 2 209 -7 7 1797 697 275 85 17 chrX 158932091 158932518 -7717778 + L1M4 LINE L1 4799 5276 -870 7 1797 605 235 117 20 chrX 158932556 158932845 -7717451 + Lx2B LINE L1 6631 6973 -27 7 1797 496 188 52 70 chrX 158932853 158933025 -7717271 + L1MB7 LINE L1 5972 6140 -44 7 1797 652 187 8 82 chrX 158934087 158934221 -7716075 - MTE2a LTR MaLR -8 371 248 7 1797 1176 74 0 0 chrX 158935415 158935563 -7714733 + B1_Mus1 SINE Alu 1 148 0 7 1797 670 230 0 0 chrX 158935576 158935702 -7714594 - B1_Mur1 SINE Alu -23 126 1 7 1797 1042 92 72 24 chrX 158935705 158935872 -7714424 - B2_Mm2 SINE B2 -2 193 19 7 1797 477 271 123 8 chrX 158935866 158935919 -7714377 - B3 SINE B2 -71 145 92 7 1797 1833 119 105 3 chrX 158935919 158936215 -7714081 - ORR1A3 LTR MaLR 0 326 1 7 1797 477 271 123 8 chrX 158936215 158936291 -7714005 - B3 SINE B2 -125 91 2 7 1797 7353 74 4 4 chrX 158936319 158937831 -7712465 - L1_Mus1 LINE L1 0 6654 5062 7 1797 387 316 230 7 chrX 158938189 158938463 -7711833 + L1M5 LINE L1 5336 5670 -454 7 1797 1267 212 126 31 chrX 158938936 158939262 -7711034 + ORR1D2 LTR MaLR 1 357 -13 7 1797 231 205 69 138 chrX 158939323 158939453 -7710843 - YREP_Mm Unknown Unknown -1484 328 208 7 1797 602 200 0 88 chrX 158939343 158939491 -7710805 + B1F SINE Alu 15 149 0 7 1797 204 125 0 0 chrX 158939565 158939597 -7710699 + (CAT)n Simple_repeat Simple_repeat 2 33 0 7 1797 895 237 42 5 chrX 158939597 158939788 -7710508 - B3 SINE B2 -12 204 7 7 1797 180 0 0 0 chrX 158941436 158941456 -7708840 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1797 216 219 46 15 chrX 158943663 158943728 -7706568 + (CATATA)n Simple_repeat Simple_repeat 4 70 0 7 1797 1392 89 0 35 chrX 158944265 158944462 -7705834 - B2_Mm2 SINE B2 -4 191 2 7 1797 22 0 0 0 chrX 158944632 158944654 -7705642 + AT_rich Low_complexity Low_complexity 1 22 0 7 1797 454 244 89 8 chrX 158946040 158946164 -7704132 + B1F SINE Alu 1 134 -15 7 1797 677 239 0 27 chrX 158946315 158946461 -7703835 + B1F SINE Alu 1 142 -7 7 1797 225 252 123 57 chrX 158946787 158946909 -7703387 + Charlie2a DNA MER1_type 638 767 -2094 7 1797 705 218 106 25 chrX 158949618 158949816 -7700480 + B3 SINE B2 3 216 0 7 1797 1118 78 0 0 chrX 158949855 158949996 -7700300 + B1_Mus1 SINE Alu 2 142 -6 7 1797 495 0 0 0 chrX 158949997 158950052 -7700244 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 7 1797 675 37 0 0 chrX 158950054 158950136 -7700160 + (GAGAA)n Simple_repeat Simple_repeat 4 85 0 7 1797 1294 66 11 42 chrX 158950904 158951094 -7699202 - B2_Mm1t SINE B2 -8 185 2 7 1797 574 229 50 100 chrX 158952762 158952922 -7697374 - B3 SINE B2 -6 189 38 7 1797 483 147 195 13 chrX 158952895 158953010 -7697286 + B1_Mur2 SINE Alu 25 148 -1 7 1797 468 174 183 0 chrX 158953020 158953135 -7697161 + Lx5 LINE L1 6904 7039 -11 8 1797 343 268 59 71 chrX 158953256 158953425 -7696871 + L1MA9 LINE L1 6082 6248 -64 8 1797 294 193 76 34 chrX 158954239 158954357 -7695939 - Lx9 LINE L1 -27 7617 7495 8 1797 343 240 0 26 chrX 158954753 158954830 -7695466 - ID4_ SINE ID -1 82 8 8 1797 440 298 0 31 chrX 158954844 158954972 -7695324 - ID_B1 SINE B4 -2 222 99 8 1797 1147 82 0 0 chrX 158955001 158955148 -7695148 - B1_Mus1 SINE Alu 0 148 2 8 1797 233 210 10 0 chrX 158955277 158955322 -7694974 + ID4 SINE ID 5 51 -32 8 1797 805 271 153 4 chrX 158955322 158955778 -7694518 + L1M4 LINE L1 5297 5820 -358 8 1797 386 321 84 21 chrX 158955891 158956034 -7694262 + RSINE1 SINE B4 2 153 -12 8 1797 214 310 97 42 chrX 158956034 158956056 -7694240 + B2_Mm2 SINE B2 1 174 -21 8 1797 409 315 15 15 chrX 158956533 158956665 -7693631 - MIR SINE MIR -114 148 17 8 1797 662 258 38 0 chrX 158958724 158958856 -7691440 + ID_B1 SINE B4 80 216 -8 8 1797 235 278 0 0 chrX 158958881 158958935 -7691361 + GA-rich Low_complexity Low_complexity 3 56 0 8 1797 580 245 74 0 chrX 158960217 158960380 -7689916 - B3 SINE B2 -7 209 35 8 1797 287 333 0 0 chrX 158960562 158960643 -7689653 + ID4 SINE ID 2 82 -1 8 1797 549 237 0 42 chrX 158960664 158960783 -7689513 + B1F SINE Alu 36 149 0 8 1797 1125 90 0 0 chrX 158961433 158961577 -7688719 + B1_Mus1 SINE Alu 3 146 -2 8 1797 516 283 87 96 chrX 158961848 158961922 -7688374 + ID_B1 SINE B4 6 217 -2 8 1797 757 229 7 0 chrX 158961922 158962062 -7688234 + B1_Mur1 SINE Alu 2 142 -7 8 1797 379 238 96 56 chrX 158962639 158962855 -7687441 + L1MB7 LINE L1 5959 6183 -1 8 1797 545 306 87 29 chrX 158964660 158964936 -7685360 - B4A SINE B4 0 292 1 8 1797 321 47 0 0 chrX 158965005 158965048 -7685248 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 8 1797 471 296 88 0 chrX 158965048 158965173 -7685123 - B1F SINE Alu -10 139 4 8 1797 3364 43 2 0 chrX 158966317 158966712 -7683584 + MTA_Mm LTR MaLR 1 396 0 8 1797 8194 61 18 5 chrX 158966712 158967796 -7682500 + MTA_Mm-int LTR MaLR 1 1098 0 8 1797 3336 43 2 0 chrX 158967796 158968191 -7682105 + MTA_Mm LTR MaLR 1 396 0 8 1797 3720 65 0 16 chrX 158968198 158968710 -7681586 + L1Md_F2 LINE L1 6067 6570 -12 8 1797 463 265 60 13 chrX 158968914 158968933 -7681363 + ID_B1 SINE B4 69 224 0 8 1797 507 223 108 0 chrX 158968933 158969063 -7681233 + B1F SINE Alu 6 149 0 8 1797 261 0 0 0 chrX 158969063 158969092 -7681204 + (A)n Simple_repeat Simple_repeat 1 29 0 8 1797 498 273 90 8 chrX 158969872 158970005 -7680291 + ID_B1 SINE B4 80 223 -1 8 1797 269 263 96 9 chrX 158970123 158970238 -7680058 - MER121 Unknown Unknown -40 372 248 8 1797 338 363 50 5 chrX 158970832 158971018 -7679278 - MIRb SINE MIR -63 205 7 8 1797 263 319 51 42 chrX 158972235 158972353 -7677943 + MLT1N2 LTR MaLR 429 547 -15 8 1797 3151 126 51 4 chrX 158972353 158972863 -7677433 + Lx3C LINE L1 6428 6961 -15 8 1797 540 0 0 0 chrX 158972863 158972923 -7677373 + (TAAAA)n Simple_repeat Simple_repeat 1 60 0 8 1797 182 298 0 17 chrX 158973034 158973092 -7677204 + L2c LINE L2 3101 3157 -230 8 1797 477 0 0 0 chrX 158974046 158974099 -7676197 + (TAA)n Simple_repeat Simple_repeat 3 55 0 8 1797 3268 77 122 8 chrX 158974183 158974665 -7675631 + Lx LINE L1 6116 6652 -2 8 1797 1026 85 50 0 chrX 158974674 158974815 -7675481 + B1_Mus1 SINE Alu 1 148 0 8 1797 697 138 0 23 chrX 158974817 158974950 -7675346 + GA-rich Low_complexity Low_complexity 3 132 0 8 1797 1888 167 49 14 chrX 158976092 158976457 -7673839 + ORR1C1 LTR MaLR 1 378 0 8 1797 359 292 113 45 chrX 158976680 158976945 -7673351 + L1MC4a LINE L1 5283 5565 -559 8 1797 329 366 34 23 chrX 158977056 158977232 -7673064 + L1MC4a LINE L1 5739 5916 -1966 8 1797 545 232 39 31 chrX 158979458 158979587 -7670709 + B1_Mur1 SINE Alu 3 132 -17 8 1797 324 0 0 0 chrX 158981146 158981182 -7669114 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 8 1797 223 381 58 6 chrX 158981436 158981592 -7668704 + MIRb SINE MIR 59 222 -46 8 1797 412 333 33 85 chrX 158981600 158981964 -7668332 + L2c LINE L2 3038 3382 -5 8 1797 518 253 44 49 chrX 158982222 158982405 -7667891 - MamRep137 DNA TcMar? -127 317 136 8 1797 274 240 78 26 chrX 158982442 158982519 -7667777 - ID_B1 SINE B4 -3 221 141 8 1797 268 288 0 0 chrX 158982562 158982628 -7667668 + BC1_Mm scRNA scRNA 6 71 -81 8 1797 701 38 19 19 chrX 158982629 158982736 -7667560 + (CA)n Simple_repeat Simple_repeat 2 108 0 8 1797 346 282 81 52 chrX 158982817 158982989 -7667307 + MIR SINE MIR 13 189 -73 8 1797 402 21 0 0 chrX 158983333 158983380 -7666916 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1797 297 261 243 0 chrX 158984170 158984281 -7666015 + B1F SINE Alu 1 138 -11 8 1797 718 275 17 6 chrX 158984425 158984604 -7665692 - B3A SINE B2 -16 182 2 8 1797 836 281 0 42 chrX 158985771 158985964 -7664332 - B3 SINE B2 -5 211 27 8 1797 1101 82 0 13 chrX 158985970 158986119 -7664177 - B1_Mm SINE Alu 0 147 1 8 1797 1421 74 0 5 chrX 158986127 158986317 -7663979 - B2_Mm2 SINE B2 -5 190 2 8 1797 407 118 0 1 chrX 158986317 158986380 -7663916 - B1_Mus2 SINE Alu -50 67 2 8 1797 1120 203 14 9 chrX 158986406 158986620 -7663676 + B3 SINE B2 2 216 0 8 1797 21 89 0 0 chrX 158986853 158986909 -7663387 + AT_rich Low_complexity Low_complexity 1 56 0 8 1797 237 95 23 23 chrX 158987280 158987323 -7662973 + ID_B1 SINE B4 180 222 -2 8 1797 269 241 0 7 chrX 158987330 158987476 -7662820 + GA-rich Low_complexity Low_complexity 1 144 0 8 1797 702 294 64 16 chrX 158988464 158988841 -7661455 + L1ME3 LINE L1 5621 6015 -147 8 1797 218 265 110 20 chrX 158989227 158989327 -7660969 + L3 LINE CR1 3089 3197 -1292 8 1798 21 0 0 0 chrX 158991007 158991028 -7659268 + AT_rich Low_complexity Low_complexity 1 21 0 8 1798 282 116 0 0 chrX 158991256 158991299 -7658997 + (TCC)n Simple_repeat Simple_repeat 3 45 0 8 1798 313 255 71 18 chrX 158991633 158991745 -7658551 + PB1D7 SINE Alu 2 119 -1 8 1798 365 351 46 23 chrX 158993203 158993419 -7656877 - MIR SINE MIR -6 256 36 8 1798 634 313 24 85 chrX 158995404 158995652 -7654644 + B4A SINE B4 60 292 0 8 1798 435 279 58 68 chrX 158995704 158995928 -7654368 + L1MB2 LINE L1 5874 6108 -63 8 1798 1233 98 33 5 chrX 158995928 158996112 -7654184 + B2_Mm2 SINE B2 2 190 -5 8 1798 435 279 58 68 chrX 158996112 158996179 -7654117 + L1MB2 LINE L1 6109 6161 -10 8 1798 4018 71 8 2 chrX 158996216 158996735 -7653561 - L1Md_F2 LINE L1 -14 6568 6047 8 1798 23 54 0 0 chrX 158996761 158996798 -7653498 + AT_rich Low_complexity Low_complexity 1 37 0 8 1798 242 232 0 35 chrX 158996850 158996864 -7653432 + ID4 SINE ID 15 70 -13 8 1798 245 163 0 23 chrX 158996864 158996908 -7653388 + ID SINE ID 29 71 -153 8 1798 245 288 0 0 chrX 158996993 158997052 -7653244 - Charlie5 DNA MER1_type -2560 64 6 8 1798 841 247 0 0 chrX 158997392 158997554 -7652742 + RSINE1 SINE B4 4 165 0 8 1798 320 75 0 0 chrX 158997573 158997613 -7652683 + HAL1-3A_ME LINE L1 1977 2016 -842 8 1798 1405 39 11 27 chrX 158997703 158997886 -7652410 + B2_Mm2 SINE B2 1 180 -15 8 1798 621 0 0 0 chrX 158997886 158997955 -7652341 + (GAAA)n Simple_repeat Simple_repeat 4 72 0 8 1798 226 280 147 0 chrX 158998499 158998574 -7651722 + Charlie15a DNA MER1_type 102 187 -37 8 1798 647 276 58 48 chrX 158998709 158998915 -7651381 - MER20 DNA MER1_type -5 214 7 8 1798 325 225 43 53 chrX 158998996 158999090 -7651206 - Charlie18a DNA MER1_type -3 339 247 8 1798 306 247 0 76 chrX 158999095 158999187 -7651109 + PB1D10 SINE Alu 26 110 -7 8 1798 894 100 0 0 chrX 158999446 158999576 -7650720 - Lx3B LINE L1 -498 6475 6346 8 1798 1252 110 9 14 chrX 158999779 159000000 -7650296 + Lx3B LINE L1 6008 6227 -746 8 1798 4400 101 101 4 chrX 159000000 159000684 -7649612 + Lx3A LINE L1 6230 6979 -2 1 1798 24 32 0 0 chrX 159000684 159000715 -7649581 + AT_rich Low_complexity Low_complexity 1 31 0 2 1798 3294 50 25 0 chrX 159000721 159001124 -7649172 - L1Md_F2 LINE L1 -565 6017 5605 3 1798 4189 66 24 0 chrX 159001124 159001657 -7648639 + L1_Mus1 LINE L1 6021 6566 -1 4 1798 232 291 72 64 chrX 159001694 159001748 -7648548 + Charlie4a DNA MER1_type 380 438 -70 5 1798 249 299 26 0 chrX 159001748 159001825 -7648471 + ID4_ SINE ID 2 80 -3 6 1798 232 291 72 64 chrX 159001825 159001895 -7648401 + Charlie4a DNA MER1_type 439 505 -3 5 1798 291 359 38 0 chrX 159002041 159002172 -7648124 - MER96 DNA hAT -10 165 30 7 1798 301 326 0 0 chrX 159002241 159002339 -7647957 + MER5B DNA MER1_type 2 99 -79 8 1798 222 260 38 25 chrX 159002534 159002613 -7647683 + ID4 SINE ID 3 82 -1 9 1798 312 291 13 0 chrX 159003689 159003768 -7646528 + ID4_ SINE ID 2 81 -2 1 1798 372 324 9 0 chrX 159004561 159004669 -7645627 + RSINE1 SINE B4 2 110 -55 1 1798 189 0 0 0 chrX 159005242 159005263 -7645033 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1798 1206 41 7 0 chrX 159005746 159005891 -7644405 + B1_Mus2 SINE Alu 2 147 0 1 1798 1168 68 0 0 chrX 159005905 159006051 -7644245 + B1_Mm SINE Alu 2 147 0 1 1798 254 211 17 17 chrX 159006704 159006762 -7643534 + CT-rich Low_complexity Low_complexity 4 61 0 1 1798 357 281 71 39 chrX 159007150 159007372 -7642924 - MTEa LTR MaLR 0 379 157 1 1798 2109 99 19 0 chrX 159008019 159008332 -7641964 + ORR1A2 LTR MaLR 1 319 -8 1 1798 9934 120 147 27 chrX 159008336 159010089 -7640207 + ORR1A2-int LTR MaLR 1 1963 0 1 1798 1552 105 97 0 chrX 159010093 159010350 -7639946 + ORR1A2 LTR MaLR 4 285 -42 1 1798 4530 113 56 1 chrX 159010350 159011033 -7639263 + Lx LINE L1 5928 6647 -7 1 1798 373 55 0 85 chrX 159011121 159011180 -7639116 + ORR1A2 LTR MaLR 273 326 0 1 1798 539 288 36 20 chrX 159011451 159011646 -7638650 + MER58D DNA MER1_type 4 201 -185 1 1798 480 226 51 29 chrX 159011664 159011801 -7638495 + ID_B1 SINE B4 3 142 -82 2 1798 908 145 0 33 chrX 159011801 159011951 -7638345 + B1_Mur4 SINE Alu 1 145 -5 2 1798 407 354 66 19 chrX 159013154 159013413 -7636883 - B4 SINE B4 -14 278 8 2 1798 297 0 0 0 chrX 159013698 159013731 -7636565 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 2 1798 1141 71 0 0 chrX 159013735 159013875 -7636421 - B1_Mus2 SINE Alu -7 140 1 2 1798 567 252 77 111 chrX 159013904 159013979 -7636317 - L1MA4 LINE L1 -265 6035 5950 2 1798 198 0 0 0 chrX 159013979 159014001 -7636295 + (TG)n Simple_repeat Simple_repeat 2 23 0 2 1798 568 214 52 155 chrX 159014001 159014309 -7635987 - L1MA4 LINE L1 -351 5949 5664 2 1798 23 0 0 0 chrX 159014324 159014347 -7635949 + AT_rich Low_complexity Low_complexity 1 23 0 2 1798 503 331 69 0 chrX 159014347 159014492 -7635804 - RSINE1 SINE B4 -1 164 10 2 1798 606 250 19 6 chrX 159015041 159015202 -7635094 - L1M2 LINE L1 -561 5607 5445 2 1798 3726 144 3 3 chrX 159015201 159015809 -7634487 + L1_Mur2 LINE L1 4785 5392 -485 3 1798 761 293 69 17 chrX 159015822 159016183 -7634113 - L1M2 LINE L1 -748 5395 5016 2 1798 3730 170 83 23 chrX 159016214 159016996 -7633300 - RMER13B LTR ERVK 0 908 80 3 1798 795 192 20 14 chrX 159018758 159018906 -7631390 + B1F SINE Alu 1 149 0 3 1798 386 159 34 167 chrX 159018922 159019126 -7631170 + RMER17C LTR ERVK 101 277 -133 3 1798 614 196 18 0 chrX 159019141 159019253 -7631043 + B1_Mur3 SINE Alu 4 117 -32 3 1798 396 0 0 0 chrX 159019262 159019306 -7630990 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 3 1798 630 230 39 28 chrX 159020158 159020337 -7629959 - MTEa LTR MaLR -8 371 191 3 1798 256 234 0 30 chrX 159020380 159020446 -7629850 + ID4_ SINE ID 20 83 0 3 1798 328 239 14 14 chrX 159020903 159020975 -7629321 - ID4 SINE ID -6 77 6 3 1798 284 279 42 127 chrX 159021192 159021381 -7628915 + MLT1N2 LTR MaLR 376 548 -14 3 1798 459 300 174 10 chrX 159021446 159021756 -7628540 - MLT1H LTR MaLR 0 549 189 4 1798 740 127 0 0 chrX 159021756 159021866 -7628430 + MusHAL1 LINE L1 1565 1674 -1038 4 1798 299 25 0 24 chrX 159021866 159021907 -7628389 + (CCCTAA)n Simple_repeat Simple_repeat 5 44 0 4 1798 583 182 0 16 chrX 159021914 159022037 -7628259 + Lx3B LINE L1 6849 6969 -4 4 1798 289 276 68 107 chrX 159022758 159023024 -7627272 - MLT1A0 LTR MaLR -56 352 91 4 1798 919 267 105 43 chrX 159023062 159023259 -7627037 - MLT1C LTR MaLR -1 466 259 4 1798 1287 134 4 100 chrX 159023259 159023370 -7626926 - URR1B DNA MER1_type 0 225 126 4 1798 1214 28 14 0 chrX 159023370 159023515 -7626781 + B1_Mm SINE Alu 1 147 0 4 1798 1287 134 4 100 chrX 159023515 159023652 -7626644 - URR1B DNA MER1_type -100 125 1 4 1798 919 267 105 43 chrX 159023652 159023893 -7626403 - MLT1C LTR MaLR -209 258 1 4 1798 200 176 0 0 chrX 159023935 159023969 -7626327 + (TTG)n Simple_repeat Simple_repeat 2 35 0 4 1798 341 284 75 34 chrX 159024000 159024146 -7626150 - MLT1H LTR MaLR -360 152 1 4 1798 2018 149 9 0 chrX 159024429 159024765 -7625531 + Lx2B LINE L1 6656 6994 -6 4 1798 719 260 70 4 chrX 159024868 159025111 -7625185 - L1MD1 LINE L1 -40 6202 5944 5 1798 369 169 14 27 chrX 159025130 159025167 -7625129 + MT2A LTR ERVL 155 191 -342 5 1798 198 0 0 0 chrX 159025167 159025189 -7625107 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 5 1798 369 169 14 27 chrX 159025189 159025224 -7625072 + MT2A LTR ERVL 192 226 -307 5 1798 353 250 13 0 chrX 159025505 159025581 -7624715 + 7SLRNA srpRNA srpRNA 12 88 -226 5 1798 807 287 73 59 chrX 159025716 159026157 -7624139 - L1MD1 LINE L1 -1280 4866 4420 5 1798 250 226 0 36 chrX 159026299 159026354 -7623942 - tRNA-Ala-GCY_ tRNA tRNA -20 55 3 5 1798 811 204 137 22 chrX 159026366 159026637 -7623659 - L1MD1 LINE L1 -1764 4382 4081 5 1798 328 273 20 10 chrX 159026770 159026870 -7623426 + ID_B1 SINE B4 90 190 -34 5 1798 256 309 24 31 chrX 159026870 159026888 -7623408 + B1_Mus1 SINE Alu 38 126 -22 5 1798 842 42 0 8 chrX 159026910 159027029 -7623267 + B1_Mm SINE Alu 2 119 -28 5 1798 459 0 0 0 chrX 159027042 159027093 -7623203 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 1798 668 269 39 0 chrX 159027167 159027349 -7622947 + MER58A DNA MER1_type 21 209 -15 5 1798 322 249 26 36 chrX 159027476 159027609 -7622687 + B1F1 SINE Alu 1 124 -23 6 1798 554 233 52 0 chrX 159027612 159027728 -7622568 + ID_B1 SINE B4 86 207 -17 6 1798 228 319 14 0 chrX 159027742 159027814 -7622482 + ID4_ SINE ID 3 75 -8 6 1798 23 0 0 0 chrX 159029441 159029464 -7620832 + GC_rich Low_complexity Low_complexity 1 23 0 6 1798 624 199 53 8 chrX 159029907 159029981 -7620315 + ID SINE ID 3 82 -142 6 1798 339 268 37 28 chrX 159029981 159030099 -7620197 + B1F1 SINE Alu 1 118 -31 6 1798 485 301 70 0 chrX 159030145 159030344 -7619952 + L1MA4 LINE L1 6024 6236 -64 6 1798 557 163 43 161 chrX 159030515 159030676 -7619620 - B1_Mur2 SINE Alu -6 143 2 6 1798 35 54 0 0 chrX 159030687 159030743 -7619553 + AT_rich Low_complexity Low_complexity 1 56 0 6 1798 977 299 73 39 chrX 159030773 159031183 -7619113 + MLT1F LTR MaLR 21 444 -104 6 1798 11485 27 0 1 chrX 159031277 159033284 -7617012 - L1Md_T LINE L1 -1 6581 4575 7 1798 21 0 0 0 chrX 159033477 159033498 -7616798 + AT_rich Low_complexity Low_complexity 1 21 0 7 1798 227 202 33 11 chrX 159033550 159033640 -7616656 + CT-rich Low_complexity Low_complexity 1 92 0 7 1798 363 250 87 0 chrX 159033701 159033805 -7616491 - B1F SINE Alu -35 114 2 7 1798 443 275 141 45 chrX 159034079 159034277 -7616019 - MER20 DNA MER1_type -1 218 2 7 1798 968 211 185 4 chrX 159034307 159034545 -7615751 - Lx3C LINE L1 0 6976 6696 7 1798 290 385 116 16 chrX 159034554 159034743 -7615553 - MLT1I LTR MaLR -48 363 156 7 1798 229 320 13 0 chrX 159034743 159034821 -7615475 + ID4 SINE ID 2 80 -3 7 1798 3161 34 10 8 chrX 159035024 159035410 -7614886 - L1Md_F3 LINE L1 -1 6583 6197 7 1798 279 91 40 20 chrX 159035507 159035565 -7614731 + B1_Mur4 SINE Alu 2 58 -91 7 1798 223 148 73 18 chrX 159035516 159035571 -7614725 + ID_B1 SINE B4 90 147 -77 8 1798 603 128 9 52 chrX 159035637 159035752 -7614544 + B1_Mur4 SINE Alu 41 150 0 8 1798 297 296 12 12 chrX 159035972 159036054 -7614242 + B4 SINE B4 211 292 0 8 1798 295 181 67 33 chrX 159036085 159036205 -7614091 - Charlie4a DNA MER1_type -92 416 293 8 1798 231 241 62 25 chrX 159036204 159036285 -7614011 + PB1D9 SINE Alu 36 119 -1 8 1798 266 268 81 20 chrX 159036386 159036485 -7613811 + PB1D10 SINE Alu 5 109 -8 8 1798 1802 148 33 0 chrX 159036523 159036826 -7613470 - ORR1B2 LTR MaLR 0 367 55 8 1798 1408 80 27 0 chrX 159036860 159037047 -7613249 - B2_Mm2 SINE B2 -3 192 1 8 1798 308 152 12 33 chrX 159037094 159037167 -7613129 - B2_Mm2 SINE B2 -95 121 47 8 1798 1060 62 7 0 chrX 159037222 159037367 -7612929 - B2_Mm1t SINE B2 -46 147 2 8 1798 2672 51 0 32 chrX 159037387 159037733 -7612563 - L1_Mus1 LINE L1 -1 6566 6232 9 1798 413 127 14 27 chrX 159037733 159037800 -7612496 - ORR1B2 LTR MaLR -299 68 1 8 1798 3996 149 6 3 chrX 159038940 159039572 -7610724 + Lx4B LINE L1 6211 6844 -214 9 1798 180 111 0 0 chrX 159039925 159039952 -7610344 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 9 1798 1084 288 35 62 chrX 159040273 159040651 -7609645 + Lx8 LINE L1 6893 7260 -213 9 1798 3680 10 0 0 chrX 159040651 159041047 -7609249 - MTA_Mm LTR MaLR 0 396 1 9 1798 9681 19 1 0 chrX 159041047 159042144 -7608152 - MTA_Mm-int LTR MaLR 0 1098 1 9 1798 3623 8 2 0 chrX 159042144 159042539 -7607757 - MTA_Mm LTR MaLR 0 396 1 9 1798 1084 288 35 62 chrX 159042539 159042610 -7607686 + Lx8 LINE L1 7261 7330 -143 9 1798 244 149 0 60 chrX 159042566 159042616 -7607680 + RMER1C Other Other 1161 1207 -135 9 1798 2321 290 64 140 chrX 159042641 159043512 -7606784 + Lx7 LINE L1 5956 6789 -907 9 1798 396 91 0 0 chrX 159043512 159043567 -7606729 - B2_Mm2 SINE B2 -94 101 47 9 1798 2321 290 64 140 chrX 159043567 159043602 -7606694 + Lx7 LINE L1 6790 6824 -872 9 1798 1405 57 11 0 chrX 159043602 159043778 -7606518 - B2_Mm1t SINE B2 -14 179 2 9 1798 2321 278 89 32 chrX 159043778 159044396 -7605900 + Lx7 LINE L1 6815 7467 -6 9 1798 38 61 0 0 chrX 159044516 159044582 -7605714 + AT_rich Low_complexity Low_complexity 1 66 0 9 1798 229 384 55 0 chrX 159044690 159044836 -7605460 + MLT1J LTR MaLR 3 156 -356 1 1798 2499 33 0 29 chrX 159044836 159045148 -7605148 - L1Md_F3 LINE L1 -14 6570 6268 1 1798 468 229 20 59 chrX 159045570 159045723 -7604573 + B1F1 SINE Alu 1 147 -2 1 1798 268 264 28 0 chrX 159045731 159045803 -7604493 + GA-rich Low_complexity Low_complexity 4 77 0 1 1798 433 236 28 98 chrX 159046012 159046170 -7604126 + B1F SINE Alu 3 149 0 1 1798 343 275 12 0 chrX 159046174 159046254 -7604042 + ID4_ SINE ID 3 83 0 1 1798 442 226 47 24 chrX 159046344 159046471 -7603825 + B1F1 SINE Alu 17 146 -3 1 1798 1092 217 69 131 chrX 159046462 159046523 -7603773 - MTE2b LTR MaLR -41 338 286 1 1798 3032 32 56 8 chrX 159046523 159046901 -7603395 - MTA_Mm LTR MaLR 0 396 1 1 1798 1092 217 69 131 chrX 159046901 159047199 -7603097 - MTE2b LTR MaLR -94 285 1 1 1798 252 292 80 40 chrX 159047199 159047324 -7602972 + L1MB3 LINE L1 6046 6175 -8 1 1798 227 224 42 115 chrX 159047426 159047522 -7602774 + PB1D10 SINE Alu 1 89 -28 1 1798 203 244 0 0 chrX 159047538 159047583 -7602713 + GA-rich Low_complexity Low_complexity 2 46 0 1 1798 578 178 8 33 chrX 159047585 159047707 -7602589 + B1_Mur1 SINE Alu 31 149 0 1 1798 263 214 0 56 chrX 159047716 159047805 -7602491 + GA-rich Low_complexity Low_complexity 2 85 0 1 1798 268 384 21 14 chrX 159048009 159048149 -7602147 - B1F SINE Alu -8 141 1 1 1798 306 278 97 72 chrX 159048338 159048411 -7601885 + L1MC4 LINE L1 7497 7581 -461 1 1798 589 245 64 14 chrX 159048411 159048552 -7601744 + B1F2 SINE Alu 2 149 0 1 1798 306 278 97 72 chrX 159048552 159048757 -7601539 + L1MC4 LINE L1 7582 7782 -260 1 1798 419 198 11 80 chrX 159048770 159048858 -7601438 - ID4_ SINE ID 0 83 2 1 1798 575 277 30 12 chrX 159048923 159049091 -7601205 + L1MC4a LINE L1 6305 6475 -1407 1 1798 731 274 58 8 chrX 159049561 159049822 -7600474 + L1MC4a LINE L1 7210 7483 -399 1 1798 492 289 12 68 chrX 159049822 159049985 -7600311 + ID_B1 SINE B4 70 223 -1 1 1798 696 227 0 0 chrX 159049985 159050264 -7600032 + GA-rich Low_complexity Low_complexity 1 279 0 1 1798 536 273 66 10 chrX 159050264 159050460 -7599836 + L1MC4a LINE L1 7479 7685 -197 1 1798 364 288 114 0 chrX 159050462 159050594 -7599702 + B1_Mm SINE Alu 1 147 0 1 1798 1072 68 8 0 chrX 159050619 159050752 -7599544 + B1_Mus2 SINE Alu 1 134 -13 1 1798 252 0 0 0 chrX 159050752 159050780 -7599516 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 1798 315 289 39 58 chrX 159050896 159050999 -7599297 - PB1D9 SINE Alu 0 120 20 1 1798 1470 212 62 14 chrX 159050999 159051353 -7598943 + ORR1D1 LTR MaLR 4 374 0 1 1798 510 234 82 47 chrX 159051379 159051549 -7598747 - B3 SINE B2 -3 213 38 1 1798 4064 105 41 3 chrX 159051559 159052163 -7598133 - Lx LINE L1 -4 6650 6024 1 1798 207 0 0 0 chrX 159052551 159052574 -7597722 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 1798 4181 84 4 89 chrX 159052598 159053807 -7596489 - Lx2 LINE L1 -649 6348 5243 1 1798 316 270 182 17 chrX 159054292 159054473 -7595823 - Kanga1 DNA Tc2 -134 1611 1401 1 1798 336 256 0 0 chrX 159054480 159054558 -7595738 + B1_Mur1 SINE Alu 55 132 -17 1 1798 498 33 0 0 chrX 159054573 159054633 -7595663 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 1798 259 272 7 105 chrX 159054648 159054800 -7595496 + L1MB7 LINE L1 4758 4894 -1252 1 1798 296 311 53 8 chrX 159054802 159054817 -7595479 + B1F2 SINE Alu 11 148 0 1 1798 497 248 0 0 chrX 159054817 159054934 -7595362 + ID_B1 SINE B4 108 224 0 1 1798 602 244 24 192 chrX 159054944 159055155 -7595141 + L1MB7 LINE L1 4890 5078 -1068 1 1798 1125 43 0 0 chrX 159055155 159055295 -7595001 - L1_Mus1 LINE L1 0 6567 6428 1 1798 602 244 24 192 chrX 159055295 159055326 -7594970 + L1MB7 LINE L1 5079 5108 -1038 1 1798 585 269 35 0 chrX 159055326 159055467 -7594829 + RSINE1 SINE B4 4 149 -16 1 1798 602 244 24 192 chrX 159055467 159055797 -7594499 + L1MB7 LINE L1 5109 5367 -779 1 1798 270 241 0 81 chrX 159055797 159055883 -7594413 + ID2 SINE ID 3 81 -2 1 1798 838 250 39 10 chrX 159055818 159056024 -7594272 + ID_B1 SINE B4 13 224 0 1 1798 600 271 21 7 chrX 159056077 159056222 -7594074 + B1F SINE Alu 1 147 -2 1 1798 1205 65 0 0 chrX 159056293 159056431 -7593865 + B1_Mus1 SINE Alu 1 138 -10 1 1798 210 37 0 0 chrX 159056431 159056458 -7593838 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1798 391 338 0 0 chrX 159056472 159056579 -7593717 + B1F2 SINE Alu 8 114 -35 1 1798 1449 251 108 7 chrX 159056579 159057024 -7593272 + L1MB7 LINE L1 5433 5922 -262 1 1798 198 0 0 0 chrX 159057026 159057048 -7593248 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1 1798 1494 62 22 0 chrX 159057063 159057241 -7593055 - B2_Mm2 SINE B2 -12 183 2 1 1798 388 388 7 7 chrX 159057259 159057407 -7592889 - B1F SINE Alu -1 148 1 1 1798 582 300 50 31 chrX 159057414 159057675 -7592621 + L1MB7 LINE L1 5916 6181 -3 1 1798 2554 229 114 35 chrX 159058625 159059444 -7590852 - RCHARR1 DNA MER1_type 0 974 92 1 1798 478 287 17 22 chrX 159060063 159060099 -7590197 - L1MA7 LINE L1 -38 6274 6239 1 1798 2019 116 3 11 chrX 159060099 159060386 -7589910 + Lx LINE L1 6365 6649 -5 1 1798 478 287 17 22 chrX 159060386 159060457 -7589839 - L1MA7 LINE L1 -74 6238 6166 1 1798 336 94 0 0 chrX 159060457 159060510 -7589786 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1798 712 285 230 49 chrX 159060510 159060911 -7589385 - L1MA7 LINE L1 -147 6165 5695 1 1798 16555 70 3 3 chrX 159060941 159062641 -7587655 - L1_Mus1 LINE L1 0 6567 4867 1 1798 4222 35 20 16 chrX 159062641 159063135 -7587161 + L1Md_F2 LINE L1 6087 6582 0 1 1798 16555 89 1 7 chrX 159063135 159064355 -7585941 - L1_Mus1 LINE L1 -1017 4866 3657 1 1798 2289 154 13 5 chrX 159064355 159064747 -7585549 - L1_Mus1 LINE L1 -5820 796 402 1 1798 1211 250 32 6 chrX 159064750 159065164 -7585132 - L1MA7 LINE L1 -687 5604 5170 1 1798 245 75 0 24 chrX 159065164 159065205 -7585091 + (TTTC)n Simple_repeat Simple_repeat 2 41 0 1 1798 868 166 13 70 chrX 159065244 159065400 -7584896 - B1_Mur2 SINE Alu -2 147 1 1 1798 1036 136 0 13 chrX 159065492 159065641 -7584655 - B1_Mus1 SINE Alu -1 147 1 1 1798 1080 212 39 24 chrX 159065667 159065875 -7584421 - B3 SINE B2 -5 211 1 1 1798 256 318 0 0 chrX 159065937 159066000 -7584296 + ID4_ SINE ID 21 83 0 1 1798 343 311 28 19 chrX 159066026 159066134 -7584162 + PB1D10 SINE Alu 1 109 -8 1 1798 909 317 40 74 chrX 159066138 159066690 -7583606 - L1MA7 LINE L1 -1061 5079 4547 1 1798 448 226 123 0 chrX 159066690 159066796 -7583500 - ID_B1 SINE B4 -4 220 102 1 1798 490 263 40 0 chrX 159066801 159066953 -7583343 - L1MA7 LINE L1 -1583 4557 4400 1 1798 420 271 61 85 chrX 159066966 159066980 -7583316 + B4 SINE B4 69 160 -132 1 1798 646 234 14 14 chrX 159066980 159067123 -7583173 + B1_Mur1 SINE Alu 1 143 -6 1 1798 284 282 0 66 chrX 159067127 159067203 -7583093 + ID4 SINE ID 6 76 -7 1 1798 520 273 85 0 chrX 159067214 159067390 -7582906 - L1MA7 LINE L1 -1818 4322 4132 1 1798 1088 192 88 0 chrX 159067398 159067591 -7582705 - B3 SINE B2 -5 211 2 1 1798 268 300 38 53 chrX 159067596 159067745 -7582551 - B1F SINE Alu -7 142 1 1 1798 1953 259 28 16 chrX 159067745 159068313 -7581983 - L1MA7 LINE L1 -1995 4145 3571 1 1798 418 289 96 9 chrX 159068313 159068428 -7581868 + B1F1 SINE Alu 1 125 -24 1 1798 276 267 0 144 chrX 159068481 159068599 -7581697 + MT2B2 LTR ERVL 158 258 -326 1 1798 559 270 14 11 chrX 159068499 159068645 -7581651 + B1F SINE Alu 8 148 -1 1 1798 321 237 95 76 chrX 159068800 159068905 -7581391 + MER20 DNA MER1_type 102 208 -11 1 1798 1156 75 0 70 chrX 159069018 159069176 -7581120 + B1_Mus1 SINE Alu 2 148 0 1 1798 271 323 111 59 chrX 159069257 159069392 -7580904 + ID_B1 SINE B4 81 222 -2 1 1798 574 306 37 25 chrX 159069411 159069572 -7580724 + RSINE1 SINE B4 3 165 0 1 1798 651 154 0 0 chrX 159069575 159069711 -7580585 + (CA)n Simple_repeat Simple_repeat 2 137 0 1 1798 282 313 0 0 chrX 159069944 159070011 -7580285 - tRNA-Ala-GCG tRNA tRNA -8 67 1 1 1798 273 298 94 19 chrX 159070037 159070143 -7580153 - PB1 SINE Alu -8 119 6 1 1798 834 133 147 0 chrX 159070336 159070479 -7579817 + URR1A DNA MER1_type 1 164 -62 1 1798 256 234 93 31 chrX 159070392 159070489 -7579807 - CYRA11_Mm Unknown Y-chromosome -297 320 218 1 1798 3695 28 0 0 chrX 159070979 159071375 -7578921 - MTA_Mm LTR MaLR 0 396 1 1 1798 546 239 26 0 chrX 159071553 159071670 -7578626 - PB1D7 SINE Alu 0 120 1 1 1798 233 235 89 0 chrX 159071747 159071840 -7578456 + PB1 SINE Alu 37 141 -8 1 1798 623 262 0 0 chrX 159072197 159072323 -7577973 - B1_Mus2 SINE Alu -5 142 17 1 1798 353 254 104 78 chrX 159072323 159072347 -7577949 - B4A SINE B4 -66 222 69 1 1798 384 97 0 0 chrX 159072410 159072472 -7577824 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 1798 359 341 101 0 chrX 159072507 159072636 -7577660 + B1F SINE Alu 2 143 -6 1 1798 255 330 32 11 chrX 159072748 159072843 -7577453 + MLT1E LTR MaLR 52 148 -412 1 1798 261 342 0 86 chrX 159072860 159072988 -7577308 + MLT1E LTR MaLR 307 423 -230 1 1798 522 268 131 43 chrX 159072998 159073251 -7577045 + MLT1E LTR MaLR 247 625 -28 1 1798 965 237 4 24 chrX 159073972 159074223 -7576073 - L1MA4 LINE L1 -393 5907 5662 1 1798 311 224 80 34 chrX 159074620 159074708 -7575588 - 4.5SRNA scRNA scRNA -2 92 1 1 1798 631 226 52 8 chrX 159074723 159074903 -7575393 + Lx9 LINE L1 5737 5926 -1718 1 1798 207 0 0 0 chrX 159074992 159075015 -7575281 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 1 1798 180 77 0 0 chrX 159075178 159075204 -7575092 + (GA)n Simple_repeat Simple_repeat 2 27 0 1 1798 2344 265 51 34 chrX 159075243 159075841 -7574455 + Lx9 LINE L1 6464 7125 -519 1 1798 285 98 0 0 chrX 159075841 159075882 -7574414 + (CAGA)n Simple_repeat Simple_repeat 4 44 0 1 1798 2344 269 57 32 chrX 159075882 159076084 -7574212 + Lx9 LINE L1 7126 7346 -298 1 1798 918 184 0 0 chrX 159076102 159076281 -7574015 + GA-rich Low_complexity Low_complexity 1 179 0 1 1798 760 136 0 43 chrX 159076297 159076481 -7573815 + GA-rich Low_complexity Low_complexity 3 178 0 1 1798 257 322 0 0 chrX 159076481 159076568 -7573728 + Lx9 LINE L1 7396 7482 -162 1 1798 1365 35 136 0 chrX 159076804 159076973 -7573323 + B2_Mm1t SINE B2 1 192 -1 1 1798 270 0 0 0 chrX 159076992 159077022 -7573274 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 1 1798 397 222 38 3 chrX 159077450 159077542 -7572754 - B1F SINE Alu -51 98 6 1 1798 461 250 27 18 chrX 159077640 159077750 -7572546 + ID_B1 SINE B4 105 215 -9 1 1798 180 0 0 0 chrX 159077750 159077770 -7572526 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1798 607 231 8 0 chrX 159077781 159077898 -7572398 + Lx9 LINE L1 7078 7195 -449 1 1798 1608 148 45 16 chrX 159077904 159078213 -7572083 + Lx9 LINE L1 7300 7617 -27 1 1798 21 0 0 0 chrX 159078255 159078276 -7572020 + AT_rich Low_complexity Low_complexity 1 21 0 1 1798 414 200 106 0 chrX 159078406 159078491 -7571805 + ID_B1 SINE B4 114 207 -17 2 1798 925 193 122 25 chrX 159078556 159078753 -7571543 + B3 SINE B2 1 216 0 2 1798 1329 196 5 0 chrX 159078966 159079180 -7571116 - ID_B1 SINE B4 -8 216 2 2 1798 501 17 0 0 chrX 159080069 159080127 -7570169 + (GAAA)n Simple_repeat Simple_repeat 4 61 0 2 1798 279 0 0 0 chrX 159081049 159081080 -7569216 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1798 256 244 12 12 chrX 159081485 159081568 -7568728 + (CCG)n Simple_repeat Simple_repeat 3 85 0 2 1798 189 0 0 0 chrX 159082028 159082049 -7568247 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1798 24 32 0 0 chrX 159082401 159082432 -7567864 + AT_rich Low_complexity Low_complexity 1 31 0 2 1798 528 59 0 0 chrX 159082575 159082643 -7567653 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 1798 432 306 18 18 chrX 159082677 159082790 -7567506 + B1F SINE Alu 1 113 -36 2 1798 892 182 7 26 chrX 159082914 159083066 -7567230 - B1_Mur2 SINE Alu 0 149 1 2 1798 638 192 33 16 chrX 159083209 159083331 -7566965 + B1F2 SINE Alu 3 126 -23 2 1798 226 330 11 0 chrX 159083588 159083679 -7566617 + A-rich Low_complexity Low_complexity 3 94 0 2 1798 513 0 0 0 chrX 159084753 159084810 -7565486 + (TAGA)n Simple_repeat Simple_repeat 3 59 0 2 1798 457 214 31 0 chrX 159084811 159084909 -7565387 - PB1D10 SINE Alu -14 103 3 2 1798 418 256 30 25 chrX 159084921 159085023 -7565273 - PB1D7 SINE Alu -102 209 22 2 1798 1607 235 37 17 chrX 159085023 159085378 -7564918 + ORR1D2 LTR MaLR 1 362 -8 2 1798 346 286 124 0 chrX 159086160 159086265 -7564031 + B1_Mur1 SINE Alu 1 118 -31 2 1798 249 211 0 0 chrX 159086267 159086324 -7563972 + (CAG)n Simple_repeat Simple_repeat 1 57 0 2 1798 1998 65 0 0 chrX 159086500 159086747 -7563549 - L1_Mus4 LINE L1 -313 6323 6077 2 1798 645 309 91 24 chrX 159086834 159087086 -7563210 - MLT1J2 LTR MaLR -176 272 4 2 1798 244 317 138 100 chrX 159087113 159087323 -7562973 + LTR16A1 LTR ERVL 1 218 -238 2 1798 258 184 0 39 chrX 159087390 159087441 -7562855 + B1_Mus2 SINE Alu 97 145 -2 2 1798 455 274 17 26 chrX 159087700 159087816 -7562480 - PB1D7 SINE Alu -3 117 3 2 1798 21 26 0 26 chrX 159087917 159087938 -7562358 + AT_rich Low_complexity Low_complexity 1 21 0 2 1798 737 250 0 0 chrX 159087938 159088082 -7562214 + B1_Mur1 SINE Alu 1 144 -5 2 1798 21 26 0 26 chrX 159088082 159088099 -7562197 + AT_rich Low_complexity Low_complexity 1 17 0 2 1798 304 253 198 0 chrX 159088514 159088605 -7561691 + PB1D7 SINE Alu 12 120 0 2 1798 547 200 0 10 chrX 159088656 159088757 -7561539 + ID_B1 SINE B4 105 204 -20 2 1798 486 282 8 0 chrX 159088897 159089014 -7561282 - PB1D9 SINE Alu -2 118 1 2 1798 362 277 0 0 chrX 159089798 159089892 -7560404 - B3 SINE B2 0 216 123 2 1798 45 19 0 0 chrX 159089892 159089944 -7560352 + AT_rich Low_complexity Low_complexity 1 52 0 2 1798 760 240 27 0 chrX 159089968 159090114 -7560182 - B3A SINE B2 -48 150 1 2 1798 1272 92 27 11 chrX 159090132 159090318 -7559978 + B2_Mm2 SINE B2 2 190 -5 2 1798 504 280 24 0 chrX 159090408 159090533 -7559763 + L1M4 LINE L1 5485 5612 -566 2 1798 286 148 19 0 chrX 159090539 159090593 -7559703 - MTE2b LTR MaLR 0 379 325 2 1798 827 207 156 0 chrX 159090593 159090772 -7559524 + B3 SINE B2 1 207 -9 2 1798 1154 72 0 0 chrX 159090796 159090935 -7559361 + B1_Mus2 SINE Alu 1 139 -8 2 1798 258 32 0 0 chrX 159090935 159090966 -7559330 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1798 783 161 109 0 chrX 159091066 159091203 -7559093 - B3 SINE B2 -64 152 1 2 1798 1080 202 132 127 chrX 159091212 159091334 -7558962 - Lx8 LINE L1 0 7473 7333 2 1798 357 24 0 0 chrX 159091334 159091376 -7558920 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 1798 1080 202 132 127 chrX 159091376 159091717 -7558579 - Lx8 LINE L1 -141 7332 7008 2 1798 353 336 8 25 chrX 159091719 159091841 -7558455 + B1F SINE Alu 22 141 -8 2 1798 2661 230 31 26 chrX 159092027 159092057 -7558239 - Lx6 LINE L1 -4 7456 7430 2 1798 1209 52 0 0 chrX 159092057 159092193 -7558103 + B1_Mus2 SINE Alu 2 137 -10 2 1798 207 0 0 0 chrX 159092193 159092216 -7558080 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1798 2661 230 31 26 chrX 159092216 159092760 -7557536 - Lx6 LINE L1 -31 7429 6879 2 1798 261 0 0 0 chrX 159092768 159092797 -7557499 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 2 1798 459 0 0 0 chrX 159092799 159092850 -7557446 + (GA)n Simple_repeat Simple_repeat 1 51 0 2 1798 279 93 0 0 chrX 159093646 159093689 -7556607 + (TGG)n Simple_repeat Simple_repeat 1 43 0 2 1798 215 362 0 48 chrX 159093692 159093776 -7556520 - B1F2 SINE Alu -61 88 9 2 1798 214 171 0 0 chrX 159093784 159093819 -7556477 + CT-rich Low_complexity Low_complexity 2 36 0 2 1798 326 337 89 0 chrX 159093825 159093926 -7556370 - PB1 SINE Alu -7 120 11 2 1798 250 286 18 0 chrX 159093930 159093986 -7556310 - B4A SINE B4 -223 69 13 2 1798 334 346 0 36 chrX 159094022 159094133 -7556163 - PB1D10 SINE Alu -10 107 1 2 1798 1239 277 78 2 chrX 159094228 159094626 -7555670 + L1MB2 LINE L1 5737 6164 -7 2 1798 289 325 55 50 chrX 159094849 159095050 -7555246 + Charlie25 DNA MER1_type 13 214 -2310 2 1798 509 234 270 42 chrX 159095071 159095308 -7554988 + B4A SINE B4 1 291 -1 2 1798 23 33 0 0 chrX 159095313 159095343 -7554953 + AT_rich Low_complexity Low_complexity 1 30 0 2 1798 666 183 80 44 chrX 159095441 159095569 -7554727 + B1_Mur4 SINE Alu 5 139 -11 2 1798 190 0 67 0 chrX 159095569 159095599 -7554697 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 1798 237 324 74 0 chrX 159095607 159095715 -7554581 + Charlie25 DNA MER1_type 232 347 -2177 2 1798 4596 134 26 6 chrX 159095742 159096433 -7553863 + Lx LINE L1 5945 6649 -5 2 1798 242 286 0 16 chrX 159096451 159096515 -7553781 + ID_B1 SINE B4 69 131 -93 2 1798 222 286 129 0 chrX 159096469 159096539 -7553757 + PB1D10 SINE Alu 5 83 -34 2 1798 389 330 0 0 chrX 159096587 159096675 -7553621 + ID_B1 SINE B4 82 169 -55 2 1798 260 339 39 47 chrX 159096675 159096714 -7553582 + B1_Mus1 SINE Alu 1 126 -22 2 1798 641 217 0 128 chrX 159096717 159096881 -7553415 + B1_Mur2 SINE Alu 1 143 -6 2 1798 650 255 7 20 chrX 159096949 159097097 -7553199 + B1F1 SINE Alu 2 147 -2 2 1798 1094 259 39 52 chrX 159097126 159097489 -7552807 + Lx8 LINE L1 7116 7473 0 2 1798 23 0 0 0 chrX 159097489 159097512 -7552784 + AT_rich Low_complexity Low_complexity 1 23 0 2 1798 462 302 261 53 chrX 159097528 159098065 -7552231 + Charlie25 DNA MER1_type 446 1094 -1430 2 1798 528 288 15 29 chrX 159098310 159098446 -7551850 - ID_B1 SINE B4 -5 219 86 2 1798 309 380 16 8 chrX 159098638 159098760 -7551536 + ID_B1 SINE B4 84 206 -18 2 1798 271 301 191 7 chrX 159099005 159099152 -7551144 + Charlie25 DNA MER1_type 1388 1561 -963 2 1798 346 301 7 65 chrX 159099223 159099376 -7550920 + Lx8 LINE L1 5858 6001 -1472 2 1798 1174 83 6 0 chrX 159099396 159099553 -7550743 + B2_Mm1t SINE B2 1 158 -35 2 1798 180 0 0 0 chrX 159099553 159099573 -7550723 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 2 1798 738 276 20 15 chrX 159099655 159099857 -7550439 + Lx8 LINE L1 6250 6452 -1021 2 1798 225 0 0 0 chrX 159099887 159099912 -7550384 + (TC)n Simple_repeat Simple_repeat 1 25 0 2 1798 402 361 50 64 chrX 159099945 159100226 -7550070 + HAL1 LINE L1 61 337 -2170 2 1798 25 31 0 0 chrX 159100234 159100266 -7550030 + AT_rich Low_complexity Low_complexity 1 32 0 2 1798 358 247 23 12 chrX 159100389 159100475 -7549821 + PB1D10 SINE Alu 21 107 -10 2 1798 780 112 9 0 chrX 159100517 159100633 -7549663 + B1_Mur4 SINE Alu 34 150 0 2 1798 305 267 0 13 chrX 159100647 159100723 -7549573 + ID4 SINE ID 2 76 -7 2 1798 330 265 0 8 chrX 159100982 159101067 -7549229 + ID4 SINE ID 5 86 -66 2 1798 211 231 19 19 chrX 159101074 159101127 -7549169 + GA-rich Low_complexity Low_complexity 2 54 0 2 1798 307 249 28 15 chrX 159101394 159101477 -7548819 + MTC LTR MaLR 1 84 -323 2 1798 424 348 75 90 chrX 159101488 159101576 -7548720 + MT2A LTR ERVL 139 244 -289 2 1798 246 81 0 0 chrX 159101576 159101613 -7548683 + (CTG)n Simple_repeat Simple_repeat 2 38 0 2 1798 424 348 75 90 chrX 159101613 159101880 -7548416 + MT2A LTR ERVL 245 490 -43 2 1798 374 114 14 0 chrX 159101880 159101950 -7548346 + (TATG)n Simple_repeat Simple_repeat 2 72 0 2 1798 424 348 75 90 chrX 159101950 159101994 -7548302 + MT2A LTR ERVL 491 533 0 2 1798 1191 247 98 29 chrX 159102000 159102346 -7547950 + Lx8 LINE L1 7020 7389 -84 2 1798 1921 288 96 50 chrX 159102556 159102644 -7547652 + L1M2 LINE L1 2425 2510 -3633 2 1798 1829 214 54 32 chrX 159102644 159103050 -7547246 + MTD LTR MaLR 5 419 0 2 1798 1921 288 96 50 chrX 159103050 159103269 -7547027 + L1M2 LINE L1 2511 2726 -3417 2 1798 1032 249 32 93 chrX 159103269 159103516 -7546780 + B4A SINE B4 2 251 -41 2 1798 1141 95 0 0 chrX 159103516 159103663 -7546633 + B1_Mus1 SINE Alu 2 148 0 2 1798 1032 249 32 93 chrX 159103663 159103725 -7546571 + B4A SINE B4 252 292 0 2 1798 1921 288 96 50 chrX 159103725 159104290 -7546006 + L1M2 LINE L1 2727 3311 -2832 2 1798 1389 97 32 0 chrX 159104290 159104476 -7545820 + B2_Mm1t SINE B2 1 192 -1 2 1798 1921 288 96 50 chrX 159104476 159104894 -7545402 + L1M2 LINE L1 3312 3776 -2367 2 1798 1305 47 0 45 chrX 159104904 159105066 -7545230 + B2_Mm1t SINE B2 2 160 -33 2 1798 489 34 0 0 chrX 159105066 159105125 -7545171 + (TAAA)n Simple_repeat Simple_repeat 3 61 0 2 1798 1305 47 0 45 chrX 159105125 159105139 -7545157 + B2_Mm1t SINE B2 161 170 -23 2 1798 973 281 9 123 chrX 159105146 159105326 -7544970 + L1_Mur3 LINE L1 3754 3925 -1955 2 1798 1182 93 29 0 chrX 159105326 159105498 -7544798 + L1Md_F2 LINE L1 6405 6581 -1 2 1798 973 281 9 123 chrX 159105498 159105521 -7544775 + L1_Mur3 LINE L1 3926 3929 -1951 2 1798 1318 97 23 6 chrX 159105521 159105698 -7544598 + B2_Mm2 SINE B2 2 181 -14 2 1798 973 281 9 123 chrX 159105698 159105931 -7544365 + L1_Mur3 LINE L1 3930 4141 -1739 2 1798 2317 257 98 26 chrX 159106018 159106673 -7543623 + Lx7 LINE L1 6359 7060 -636 2 1798 11838 16 1 2 chrX 159106679 159108225 -7542071 + L1Md_A LINE L1 1 1344 -5380 2 1798 16359 4 0 0 chrX 159110666 159112467 -7537829 + L1Md_A LINE L1 3786 5586 -297 2 1798 9153 6 0 0 chrX 159112467 159113463 -7536833 + L1Md_A LINE L1 5587 6582 0 2 1798 682 289 18 18 chrX 159113466 159113688 -7536608 + Lx7 LINE L1 7049 7270 -426 2 1798 303 236 36 18 chrX 159113697 159113809 -7536487 + T-rich Low_complexity Low_complexity 1 114 0 2 1798 6000 115 26 81 chrX 159113893 159115007 -7535289 + ORR1A4-int LTR MaLR 848 1900 -63 2 1798 217 65 87 0 chrX 159115024 159115070 -7535226 + (TATAA)n Simple_repeat Simple_repeat 3 52 0 2 1798 467 141 0 0 chrX 159115080 159115151 -7535145 + ORR1A4-int LTR MaLR 1893 1963 0 2 1798 2007 117 8 84 chrX 159115151 159115507 -7534789 + ORR1A4 LTR MaLR 1 329 0 2 1798 432 0 0 0 chrX 159115570 159115618 -7534678 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1798 387 0 0 0 chrX 159115714 159115757 -7534539 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 3 1798 1090 263 152 15 chrX 159115769 159116111 -7534185 + Lx9 LINE L1 5362 5725 -575 3 1798 505 186 309 37 chrX 159116111 159116273 -7534023 + B3 SINE B2 2 207 -9 3 1798 1090 279 126 95 chrX 159116273 159116624 -7533672 + Lx9 LINE L1 5706 6028 -1616 3 1798 446 96 0 14 chrX 159116827 159116901 -7533395 + (TC)n Simple_repeat Simple_repeat 2 74 0 3 1798 198 0 0 0 chrX 159116901 159116923 -7533373 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 1798 4567 233 67 23 chrX 159117436 159118615 -7531681 + Lx9 LINE L1 6399 7629 -15 3 1798 1010 147 9 77 chrX 159119229 159119450 -7530846 - RLTR23 LTR ERV1 0 430 225 3 1798 417 179 87 26 chrX 159119502 159119617 -7530679 - RLTR23 LTR ERV1 -211 219 98 3 1798 308 106 0 0 chrX 159119661 159119708 -7530588 - RLTR23 LTR ERV1 -330 100 54 3 1798 849 102 7 52 chrX 159119708 159119863 -7530433 + B1_Mus1 SINE Alu 1 148 0 3 1798 645 105 0 0 chrX 159119863 159119958 -7530338 + (GA)n Simple_repeat Simple_repeat 2 96 0 3 1798 402 79 0 45 chrX 159119960 159120026 -7530270 - RLTR23 LTR ERV1 -357 73 11 3 1798 2314 76 132 11 chrX 159120592 159120940 -7529356 - RLTR10 LTR ERVK 0 390 1 3 1798 1147 61 0 33 chrX 159121023 159121038 -7529258 - B1_Mus2 SINE Alu 0 147 137 3 1798 477 0 0 0 chrX 159121038 159121091 -7529205 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 3 1798 1147 61 0 33 chrX 159121091 159121227 -7529069 - B1_Mus2 SINE Alu -11 136 1 3 224 1353 118 43 0 chrX 159121238 159121449 -7528847 - Lx2 LINE L1 0 6997 6778 3 1799 3301 111 55 18 chrX 159121452 159121964 -7528332 - Lx2 LINE L1 -354 6643 6113 3 1799 28 0 0 0 chrX 159121989 159122017 -7528279 + AT_rich Low_complexity Low_complexity 1 28 0 3 1799 231 217 0 0 chrX 159122026 159122072 -7528224 + (TATG)n Simple_repeat Simple_repeat 3 48 0 3 1799 345 174 0 0 chrX 159122330 159122428 -7527868 + (TG)n Simple_repeat Simple_repeat 2 99 0 3 1799 360 276 51 26 chrX 159123152 159123308 -7526988 - MER110A LTR ERV1 0 491 332 3 1799 819 285 56 11 chrX 159123362 159123632 -7526664 - L1ME3 LINE L1 -189 5973 5692 3 1799 1086 69 0 0 chrX 159123663 159123807 -7526489 + (TTTC)n Simple_repeat Simple_repeat 1 144 0 3 1799 235 296 12 0 chrX 159123841 159123922 -7526374 - L1ME3 LINE L1 -512 5661 5580 3 1799 294 164 0 0 chrX 159124107 159124162 -7526134 + T-rich Low_complexity Low_complexity 1 55 0 3 1799 1048 72 0 0 chrX 159124169 159124308 -7525988 - B1_Mus1 SINE Alu -3 145 7 3 1799 575 234 5 171 chrX 159124173 159124395 -7525901 - ID_B1 SINE B4 -7 217 33 3 1799 278 307 0 0 chrX 159124343 159124418 -7525878 - ID4_ SINE ID 0 83 9 3 1799 329 0 24 0 chrX 159124464 159124505 -7525791 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1799 266 164 18 0 chrX 159124569 159124624 -7525672 + CT-rich Low_complexity Low_complexity 1 56 0 3 1799 601 226 33 28 chrX 159124652 159124866 -7525430 + L1MA5 LINE L1 5740 5954 -346 3 1799 229 292 37 37 chrX 159125583 159125718 -7524578 - MER110A LTR ERV1 -67 401 267 3 1799 274 239 0 14 chrX 159125708 159125780 -7524516 + PB1D10 SINE Alu 40 110 -7 3 1799 489 309 108 3 chrX 159125824 159126110 -7524186 + 7SK RNA RNA 13 328 -3 3 1799 9639 99 41 16 chrX 159126130 159128233 -7522063 + L1VL1 LINE L1 210 2372 -1326 3 1799 415 306 38 68 chrX 159128242 159128445 -7521851 + L1MA4 LINE L1 5066 5261 -882 3 1799 1158 181 5 24 chrX 159128445 159128655 -7521641 + B3 SINE B2 5 210 -6 3 1799 415 296 23 33 chrX 159128655 159128834 -7521462 + L1MA4 LINE L1 5262 5441 -683 3 1799 415 283 24 59 chrX 159128834 159129003 -7521293 + B3A SINE B2 36 198 0 3 1799 384 221 213 0 chrX 159129117 159129280 -7521016 + L1MA4 LINE L1 5410 5608 -683 3 1799 366 23 0 0 chrX 159129351 159129394 -7520902 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1799 562 284 93 36 chrX 159129395 159129727 -7520569 + L1MA4 LINE L1 5599 5949 -351 3 1799 198 176 0 0 chrX 159129888 159129939 -7520357 + CT-rich Low_complexity Low_complexity 1 51 0 3 1799 394 288 55 28 chrX 159130055 159130237 -7520059 + B3A SINE B2 2 188 -10 3 1799 338 200 25 62 chrX 159130779 159130859 -7519437 + PB1D10 SINE Alu 40 116 -1 3 1799 268 183 69 14 chrX 159130869 159130941 -7519355 - MER110A LTR ERV1 -319 149 74 3 1799 983 100 0 0 chrX 159130959 159131099 -7519197 + B1_Mur3 SINE Alu 10 149 0 3 1799 279 175 0 0 chrX 159131099 159131156 -7519140 + GA-rich Low_complexity Low_complexity 1 57 0 3 1799 990 286 33 10 chrX 159131195 159131495 -7518801 + 7SK RNA RNA 20 326 -5 3 1799 223 322 11 22 chrX 159131495 159131587 -7518709 + GA-rich Low_complexity Low_complexity 2 92 0 3 1799 505 268 96 82 chrX 159131915 159132052 -7518244 + L1_Mur3 LINE L1 4288 4416 -1464 3 1799 1250 34 0 7 chrX 159132052 159132199 -7518097 - B1_Mm SINE Alu -1 146 1 3 1799 505 268 96 82 chrX 159132199 159132341 -7517955 + L1_Mur3 LINE L1 4417 4571 -1309 3 1799 622 276 12 6 chrX 159132368 159132430 -7517866 + ID SINE ID 19 81 -143 3 1799 272 297 40 48 chrX 159132430 159132554 -7517742 + B1F1 SINE Alu 1 123 -26 3 1799 387 293 19 121 chrX 159132554 159132582 -7517714 - L1MA4 LINE L1 -1553 5920 5892 3 1799 879 90 267 7 chrX 159132582 159132721 -7517575 + B2_Mm2 SINE B2 2 179 -16 3 1799 1156 61 0 26 chrX 159132721 159132857 -7517439 + B1_Mus1 SINE Alu 1 136 -12 3 1799 360 0 0 0 chrX 159132857 159132897 -7517399 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 3 1799 1156 61 0 26 chrX 159132897 159132911 -7517385 + B1_Mus1 SINE Alu 137 147 -1 3 1799 400 275 22 115 chrX 159132917 159133052 -7517244 - L1MA4 LINE L1 -372 5928 5757 3 1799 975 228 14 5 chrX 159133052 159133259 -7517037 + B3 SINE B2 3 211 -5 3 1799 400 275 22 115 chrX 159133259 159133351 -7516945 - L1MA4 LINE L1 -509 5791 5724 3 1799 352 250 23 0 chrX 159133351 159133439 -7516857 + MTE2b LTR MaLR 68 157 -222 3 1799 7218 51 0 0 chrX 159133597 159134462 -7515834 - L1Md_F2 LINE L1 -199 5684 4820 3 1799 7190 39 5 0 chrX 159134462 159135317 -7514979 + L1Md_F2 LINE L1 5722 6580 -2 3 1799 1029 46 0 30 chrX 159136312 159136447 -7513849 + B1_Mus1 SINE Alu 5 135 -13 3 1799 1228 34 7 0 chrX 159137290 159137436 -7512860 - B1_Mm SINE Alu 0 147 1 3 1799 800 239 0 0 chrX 159137568 159137731 -7512565 + RSINE1 SINE B4 3 165 0 3 1799 876 226 39 5 chrX 159137820 159138025 -7512271 + B3 SINE B2 5 216 0 3 1799 390 259 98 39 chrX 159138055 159138208 -7512088 + RSINE1 SINE B4 3 164 -1 3 1799 291 271 9 94 chrX 159138278 159138384 -7511912 + MT2B LTR ERVL 167 263 -338 3 1799 414 0 0 0 chrX 159138384 159138430 -7511866 + (GA)n Simple_repeat Simple_repeat 1 46 0 3 1799 1284 246 21 0 chrX 159138625 159138954 -7511342 + L1M2 LINE L1 3511 3846 -2297 3 1799 378 218 63 9 chrX 159138958 159139069 -7511227 - Lx6 LINE L1 -27 7433 7317 3 1799 585 128 0 0 chrX 159139069 159139171 -7511125 + (GGGA)n Simple_repeat Simple_repeat 2 103 0 3 1799 264 229 0 0 chrX 159139177 159139225 -7511071 - Lx6 LINE L1 -137 7323 7276 3 1799 232 226 0 31 chrX 159139225 159139289 -7511007 + Lx5 LINE L1 6989 7050 0 3 1799 2161 274 54 45 chrX 159139300 159139838 -7510458 - Lx6 LINE L1 -177 7283 6730 3 1799 1237 14 0 20 chrX 159139838 159139988 -7510308 - B1_Mus2 SINE Alu 0 147 1 3 1799 2161 274 16 13 chrX 159139988 159140236 -7510060 - Lx6 LINE L1 -731 6729 6273 3 1799 708 271 9 42 chrX 159140236 159140452 -7509844 + L1M2 LINE L1 3813 4043 -2097 3 1799 290 257 89 18 chrX 159140538 159140635 -7509661 - PB1D7 SINE Alu -4 116 12 3 1799 475 269 21 25 chrX 159140635 159140825 -7509471 - L1ME2 LINE L1 -307 5855 5665 3 1799 851 259 25 78 chrX 159140894 159141185 -7509111 - B4 SINE B4 -6 286 47 3 1799 303 93 0 0 chrX 159141185 159141228 -7509068 + (CTG)n Simple_repeat Simple_repeat 2 44 0 3 1799 851 213 0 11 chrX 159141228 159141323 -7508973 - B4 SINE B4 -246 46 16 3 1799 419 295 0 67 chrX 159141297 159141417 -7508879 - B4A SINE B4 -180 112 1 3 1799 547 207 166 94 chrX 159141471 159141652 -7508644 - B3A SINE B2 -4 194 1 3 1799 1250 41 0 0 chrX 159141692 159141839 -7508457 - B1_Mus2 SINE Alu 0 147 1 3 1799 906 229 6 0 chrX 159141984 159142163 -7508133 + B3 SINE B2 4 183 -33 3 1799 397 258 46 46 chrX 159142127 159142257 -7508039 + ID_B1 SINE B4 83 212 -12 3 1799 545 229 121 17 chrX 159142372 159142612 -7507684 + RLTR10A LTR ERVK 147 411 0 3 1799 464 288 0 17 chrX 159142612 159142730 -7507566 + B1F SINE Alu 34 149 0 3 1799 1578 47 0 25 chrX 159142739 159142936 -7507360 - B2_Mm2 SINE B2 -2 193 2 3 1799 654 219 29 0 chrX 159142967 159143104 -7507192 + B1F SINE Alu 1 141 -8 3 1799 181 222 16 16 chrX 159143104 159143168 -7507128 + GA-rich Low_complexity Low_complexity 1 64 0 3 1799 565 246 16 0 chrX 159143286 159143412 -7506884 + B1F SINE Alu 1 128 -21 3 1799 267 31 0 0 chrX 159143413 159143445 -7506851 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 1799 312 27 0 0 chrX 159143913 159143950 -7506346 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1799 549 220 83 8 chrX 159144069 159144202 -7506094 + B1_Mur1 SINE Alu 1 143 -6 3 1799 785 178 0 49 chrX 159144208 159144350 -7505946 + B1_Mus1 SINE Alu 1 135 -13 3 1799 6451 141 124 18 chrX 159144350 159145496 -7504800 + Lx4B LINE L1 5792 7058 0 3 1799 1151 107 0 6 chrX 159145546 159145725 -7504571 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 3 1799 471 246 3 0 chrX 159145761 159145863 -7504433 + PB1D10 SINE Alu 11 115 -5 3 1799 1154 62 0 0 chrX 159145867 159146011 -7504285 + B1_Mus1 SINE Alu 1 144 -4 3 1799 362 233 284 0 chrX 159146090 159146206 -7504090 + ID_B1 SINE B4 4 152 -72 3 1799 510 185 11 0 chrX 159146209 159146301 -7503995 + B4A SINE B4 1 93 -199 3 1799 899 144 0 27 chrX 159146308 159146458 -7503838 + B1_Mur4 SINE Alu 5 150 0 3 1799 227 318 0 16 chrX 159146483 159146547 -7503749 + B4 SINE B4 82 144 -148 3 1799 1164 75 0 0 chrX 159146617 159146776 -7503520 + B2_Mm1a SINE B2 2 160 -33 3 1799 279 0 0 0 chrX 159146776 159146807 -7503489 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 3 1799 1013 80 168 30 chrX 159146823 159146990 -7503306 + B2_Mm1t SINE B2 2 191 -2 3 1799 1228 77 77 6 chrX 159147007 159147176 -7503120 + B2_Mm2 SINE B2 1 181 -14 3 1799 482 233 19 0 chrX 159147240 159147343 -7502953 + ID_B1 SINE B4 104 208 -16 3 1799 487 265 87 43 chrX 159147372 159147510 -7502786 + B1F2 SINE Alu 1 144 -5 3 1799 544 241 0 8 chrX 159147639 159147756 -7502540 + PB1D9 SINE Alu 4 119 -1 3 1799 458 209 11 11 chrX 159147818 159147910 -7502386 - PB1D10 SINE Alu -1 116 25 3 1799 318 106 0 0 chrX 159147916 159147963 -7502333 + (TGG)n Simple_repeat Simple_repeat 1 47 0 3 1799 545 250 21 35 chrX 159148066 159148207 -7502089 - ID_B1 SINE B4 0 224 86 4 1799 669 225 14 7 chrX 159148528 159148667 -7501629 - B1_Mur1 SINE Alu -9 140 1 4 1799 22 56 0 0 chrX 159148669 159148705 -7501591 + AT_rich Low_complexity Low_complexity 1 36 0 4 1799 276 281 20 119 chrX 159148733 159148834 -7501462 - RSINE1 SINE B4 -53 112 22 4 1799 609 203 24 16 chrX 159148844 159148969 -7501327 - B3 SINE B2 -90 126 1 4 1799 1464 70 11 0 chrX 159149033 159149220 -7501076 - B2_Mm1t SINE B2 -4 189 1 4 1799 628 286 0 0 chrX 159149401 159149548 -7500748 + ID_B1 SINE B4 78 224 0 4 1799 960 170 14 0 chrX 159149753 159149900 -7500396 - B1_Mur2 SINE Alu 0 149 1 4 1799 1209 118 52 35 chrX 159149901 159150130 -7500166 + MTC LTR MaLR 1 233 -188 4 1799 526 144 60 30 chrX 159150094 159150194 -7500102 + B1_Mur2 SINE Alu 42 144 -5 4 1799 450 121 0 0 chrX 159150217 159150283 -7500013 + B1_Mus2 SINE Alu 3 68 -79 4 1799 356 312 18 0 chrX 159150266 159150375 -7499921 - ID_B1 SINE B4 -33 191 81 4 1799 421 242 21 0 chrX 159150283 159150305 -7499991 + B4 SINE B4 101 177 -115 4 1799 288 0 0 0 chrX 159150381 159150413 -7499883 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 4 1799 628 89 119 0 chrX 159150415 159150516 -7499780 - B1_Mur4 SINE Alu -13 137 25 4 1799 298 204 46 9 chrX 159150551 159150660 -7499636 - Lx9 LINE L1 -1 7643 7531 4 1799 3467 23 2 8 chrX 159150919 159151317 -7498979 + MTA_Mm LTR MaLR 1 396 0 4 1799 640 92 216 18 chrX 159151539 159151650 -7498646 + B1_Mus2 SINE Alu 3 135 -12 4 1799 760 207 14 0 chrX 159151710 159151850 -7498446 + B1_Mur1 SINE Alu 3 144 -5 4 1799 790 238 25 35 chrX 159152047 159152247 -7498049 - B3A SINE B2 0 198 1 4 1799 764 150 45 0 chrX 159152270 159152403 -7497893 - B1F SINE Alu -10 139 1 4 1799 2452 123 56 8 chrX 159152469 159152845 -7497451 + ORR1B1 LTR MaLR 1 394 0 4 1799 1234 34 0 14 chrX 159152993 159153141 -7497155 + B1_Mm SINE Alu 1 146 -1 4 1799 268 250 24 24 chrX 159153710 159153792 -7496504 + ID4 SINE ID 2 83 0 4 1799 2239 88 16 0 chrX 159153858 159154176 -7496120 - Lx4A LINE L1 -944 6114 5792 4 1799 898 142 0 0 chrX 159154176 159154310 -7495986 - B1_Mus1 SINE Alu -13 135 2 4 1799 563 217 62 0 chrX 159154363 159154492 -7495804 + ID_B1 SINE B4 88 224 0 4 1799 294 320 89 37 chrX 159154631 159154845 -7495451 + Lx8 LINE L1 7248 7472 -1 4 1799 656 159 0 0 chrX 159154946 159155059 -7495237 + PB1D9 SINE Alu 1 113 -7 4 1799 26 0 0 27 chrX 159155096 159155113 -7495183 + AT_rich Low_complexity Low_complexity 1 17 0 4 1799 1680 36 0 0 chrX 159155113 159155306 -7494990 + B2_Mm1t SINE B2 1 193 0 4 1799 26 0 0 27 chrX 159155306 159155325 -7494971 + AT_rich Low_complexity Low_complexity 1 19 0 4 1799 1142 81 0 0 chrX 159155339 159155487 -7494809 + B1_Mus1 SINE Alu 1 148 0 4 1799 414 239 66 15 chrX 159155546 159155682 -7494614 + B1F2 SINE Alu 1 143 -6 4 1799 296 320 0 0 chrX 159155689 159155764 -7494532 + ID4 SINE ID 1 75 -8 4 1799 296 295 160 0 chrX 159155868 159156024 -7494272 + LTR50 LTR ERVL 19 199 -596 4 1799 337 261 0 0 chrX 159156231 159156300 -7493996 + RSINE1 SINE B4 3 71 -94 4 1799 465 202 240 16 chrX 159156315 159156436 -7493860 + B1_Mur2 SINE Alu 1 148 -1 4 1799 1180 32 26 0 chrX 159156453 159156598 -7493698 + B2_Mm1t SINE B2 2 160 -33 4 1799 264 30 0 0 chrX 159156608 159156641 -7493655 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 4 1799 373 209 10 99 chrX 159156641 159156731 -7493565 + RSINE1 SINE B4 82 165 0 4 1799 1194 56 0 0 chrX 159157237 159157381 -7492915 - B1_Mus2 SINE Alu -2 145 2 4 1799 360 271 68 52 chrX 159157553 159157664 -7492632 + L1M4 LINE L1 4729 4843 -1303 4 1799 896 173 47 52 chrX 159157664 159157877 -7492419 - B3 SINE B2 -4 212 1 4 1799 360 271 68 52 chrX 159157877 159157956 -7492340 + L1M4 LINE L1 4844 4922 -1224 4 1799 1204 42 0 0 chrX 159158029 159158171 -7492125 + B1_Mus1 SINE Alu 1 142 -6 4 1799 2153 190 31 29 chrX 159158215 159158659 -7491637 + Lx5 LINE L1 6603 7047 -3 4 1799 21 0 0 31 chrX 159158659 159158678 -7491618 + AT_rich Low_complexity Low_complexity 1 19 0 4 1799 1450 75 11 0 chrX 159158678 159158865 -7491431 + B2_Mm1t SINE B2 1 189 -4 4 1799 21 0 0 31 chrX 159158865 159158877 -7491419 + AT_rich Low_complexity Low_complexity 1 12 0 4 1799 930 144 20 0 chrX 159158991 159159137 -7491159 + B1_Mur4 SINE Alu 1 149 -1 4 1799 240 35 0 0 chrX 159159137 159159166 -7491130 + (GGA)n Simple_repeat Simple_repeat 2 30 0 4 1799 451 247 0 0 chrX 159159310 159159407 -7490889 - B3A SINE B2 -99 99 3 4 1799 559 149 83 9 chrX 159159418 159159526 -7490770 - ID_B1 SINE B4 -6 218 103 4 1799 997 60 0 0 chrX 159159582 159159715 -7490581 + B2_Mm2 SINE B2 2 134 -61 4 1799 426 284 0 0 chrX 159160239 159160348 -7489948 + B3A SINE B2 1 109 -89 4 1799 365 222 67 48 chrX 159160501 159160605 -7489691 + PB1D9 SINE Alu 10 115 -5 4 1799 984 228 5 15 chrX 159160607 159160812 -7489484 - B3 SINE B2 -13 203 1 4 1799 345 293 43 43 chrX 159160823 159160962 -7489334 + B1F SINE Alu 11 149 0 4 1799 180 0 0 0 chrX 159161612 159161632 -7488664 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1799 1227 34 0 0 chrX 159161632 159161778 -7488518 - B1_Mm SINE Alu 0 147 2 4 1799 778 175 13 40 chrX 159161913 159162062 -7488234 + B1_Mur4 SINE Alu 3 147 -3 4 1799 229 0 83 0 chrX 159162062 159162098 -7488198 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1799 680 228 113 61 chrX 159162111 159162340 -7487956 + B4A SINE B4 2 242 -50 4 1799 320 245 90 9 chrX 159162348 159162459 -7487837 + PB1 SINE Alu 1 120 -7 4 1799 519 280 12 71 chrX 159162749 159162918 -7487378 + RSINE1 SINE B4 7 165 0 4 1799 270 56 0 0 chrX 159162946 159162982 -7487314 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 4 1799 8644 40 1 2 chrX 159163028 159164300 -7485996 - L1Md_A LINE L1 -1 6581 5351 4 1799 763 192 8 0 chrX 159164374 159164504 -7485792 + B1_Mur2 SINE Alu 2 132 -17 4 1799 514 29 0 0 chrX 159164508 159164577 -7485719 + L1_Mus2 LINE L1 6498 6566 0 4 1799 1168 75 0 0 chrX 159164767 159164913 -7485383 + B1_Mm SINE Alu 1 146 -1 4 1799 300 269 0 71 chrX 159164921 159164948 -7485348 + ID_B1 SINE B4 121 220 0 4 1799 453 173 0 0 chrX 159164948 159165029 -7485267 + B1_Mur1 SINE Alu 69 149 0 4 1799 21 0 0 0 chrX 159165033 159165054 -7485242 + AT_rich Low_complexity Low_complexity 1 21 0 4 1799 300 221 69 28 chrX 159166122 159166266 -7484030 + (CAGAGA)n Simple_repeat Simple_repeat 1 150 0 4 1799 310 225 25 0 chrX 159166475 159166555 -7483741 + LTR33C LTR ERVL 1 82 -547 4 1799 519 17 0 0 chrX 159166600 159166660 -7483636 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 1799 230 254 48 0 chrX 159166869 159166932 -7483364 + ID4_ SINE ID 16 81 -2 4 1799 764 224 0 20 chrX 159167177 159167327 -7482969 + B1_Mur2 SINE Alu 1 147 -2 4 1799 1184 68 0 0 chrX 159167387 159167535 -7482761 + B1_Mus1 SINE Alu 1 148 0 4 1799 1421 76 11 0 chrX 159167540 159167724 -7482572 + B2_Mm1t SINE B2 2 187 -6 4 1799 752 51 0 0 chrX 159167734 159167832 -7482464 + B1_Mm SINE Alu 50 147 0 4 1799 283 57 37 19 chrX 159167832 159167886 -7482410 + (TAAAAA)n Simple_repeat Simple_repeat 6 60 0 4 1799 892 198 8 16 chrX 159167894 159168095 -7482201 + B3 SINE B2 1 191 -4 4 1799 2011 134 11 23 chrX 159168443 159168632 -7481664 - Lx3C LINE L1 -786 6190 6007 4 1799 3184 47 26 0 chrX 159168632 159169018 -7481278 - MTA_Mm LTR MaLR 0 396 1 4 1799 2011 134 11 23 chrX 159169018 159169180 -7481116 - Lx3C LINE L1 -970 6006 5844 4 1799 4423 132 37 16 chrX 159169180 159169935 -7480361 + Lx3C LINE L1 6202 6972 -4 4 1799 21 0 0 0 chrX 159169935 159169956 -7480340 + AT_rich Low_complexity Low_complexity 1 21 0 4 1799 6280 179 52 5 chrX 159169995 159171199 -7479097 + Lx9 LINE L1 6381 7641 -3 4 1799 842 205 141 0 chrX 159171302 159171487 -7478809 - B3 SINE B2 -5 211 1 4 1799 1114 56 0 40 chrX 159171534 159171682 -7478614 - B1_Mus2 SINE Alu -5 142 1 4 1799 2134 60 7 24 chrX 159171838 159172126 -7478170 - L1_Mus2 LINE L1 -1 6565 6283 4 1799 1004 231 51 15 chrX 159172395 159172668 -7477628 + B4A SINE B4 3 285 -7 4 1799 414 134 0 0 chrX 159172684 159172751 -7477545 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 1799 387 229 83 0 chrX 159172772 159172868 -7477428 + ID_B1 SINE B4 113 216 -8 4 1799 410 295 45 15 chrX 159172865 159172999 -7477297 - MER3 DNA MER1_type -70 139 2 4 1799 495 214 3 23 chrX 159174072 159174215 -7476081 + B1_Mur2 SINE Alu 1 149 0 4 1799 343 167 0 29 chrX 159174689 159174757 -7475539 - L1MB8 LINE L1 -15 6163 6098 4 1799 437 272 0 0 chrX 159174929 159175032 -7475264 + ID_B1 SINE B4 85 187 -37 4 1799 868 212 62 33 chrX 159175056 159175266 -7475030 + B3 SINE B2 1 216 0 4 1799 757 181 7 40 chrX 159175275 159175425 -7474871 + B1_Mur2 SINE Alu 4 148 -1 4 1799 656 219 16 27 chrX 159175458 159175641 -7474655 + B4A SINE B4 108 288 -4 4 1799 23 54 0 0 chrX 159175644 159175681 -7474615 + AT_rich Low_complexity Low_complexity 1 37 0 4 1799 631 132 0 142 chrX 159175691 159175832 -7474464 - B1_Mus1 SINE Alu -21 127 7 5 1799 296 215 77 0 chrX 159175879 159175944 -7474352 - L1MB8 LINE L1 -183 5995 5926 4 1799 932 254 67 33 chrX 159176033 159176046 -7474250 - L1MB8 LINE L1 -227 5951 5939 4 1799 1223 55 0 7 chrX 159176046 159176194 -7474102 - B1_Mus1 SINE Alu 0 148 2 5 1799 932 254 67 33 chrX 159176194 159176510 -7473786 - L1MB8 LINE L1 -240 5938 5611 4 1799 814 230 66 9 chrX 159176521 159176732 -7473564 - ID_B1 SINE B4 0 224 2 5 1799 1324 101 16 11 chrX 159176742 159176932 -7473364 - B2_Mm2 SINE B2 -3 192 2 5 1799 194 180 16 0 chrX 159177001 159177062 -7473234 + C-rich Low_complexity Low_complexity 3 64 0 5 1799 291 246 52 43 chrX 159177069 159177184 -7473112 - B1F SINE Alu 0 149 34 5 1799 360 211 261 15 chrX 159177235 159177365 -7472931 - L1MB8 LINE L1 -1136 5010 4849 4 1799 1073 30 76 0 chrX 159177367 159177498 -7472798 + B1_Mus1 SINE Alu 2 142 -6 5 1799 1146 102 72 0 chrX 159177510 159177676 -7472620 + B2_Mm1t SINE B2 2 179 -14 5 1799 385 91 0 0 chrX 159177707 159177762 -7472534 + B2_Mm2 SINE B2 47 101 -94 5 1799 195 69 0 0 chrX 159177801 159177830 -7472466 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1799 313 287 76 6 chrX 159177918 159177964 -7472332 - L1MB8 LINE L1 -1398 4748 4701 4 1799 2829 66 139 137 chrX 159177964 159178475 -7471821 - RLTR1B LTR ERV1 0 512 1 5 1799 313 287 76 6 chrX 159178475 159178600 -7471696 - L1MB8 LINE L1 -1446 4700 4567 4 1799 207 114 0 0 chrX 159178629 159178664 -7471632 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 5 1799 565 270 6 73 chrX 159178673 159178837 -7471459 - B3A SINE B2 -4 194 42 5 1799 840 83 121 0 chrX 159178876 159179008 -7471288 + B1_Mus1 SINE Alu 1 148 0 5 1799 191 125 25 0 chrX 159179008 159179048 -7471248 + (GAA)n Simple_repeat Simple_repeat 2 42 0 5 1799 345 313 104 57 chrX 159179093 159179391 -7470905 - Lx8 LINE L1 -8 7465 7154 5 1799 211 186 23 0 chrX 159179593 159179636 -7470660 - B3A SINE B2 -154 44 1 5 1799 239 274 0 0 chrX 159179656 159179707 -7470589 - PB1D10 SINE Alu -30 87 37 5 1799 466 252 26 0 chrX 159179916 159180031 -7470265 + PB1D7 SINE Alu 1 118 -2 5 1799 284 45 68 0 chrX 159180108 159180152 -7470144 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 5 1799 233 297 92 99 chrX 159180200 159180216 -7470080 + B4 SINE B4 76 216 -76 5 1799 590 286 0 0 chrX 159180216 159180342 -7469954 + B1_Mur4 SINE Alu 15 140 -10 5 1799 192 40 0 0 chrX 159180342 159180367 -7469929 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 5 1799 267 296 25 0 chrX 159180906 159180987 -7469309 - ID_B1 SINE B4 -6 218 136 5 1799 228 130 0 0 chrX 159181224 159181270 -7469026 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 1799 4751 111 42 42 chrX 159181328 159181934 -7468362 - Lx LINE L1 0 6654 6045 5 1799 1643 26 0 16 chrX 159181934 159182126 -7468170 - B2_Mm1a SINE B2 -3 190 2 5 1799 4751 111 42 42 chrX 159182126 159182299 -7467997 - Lx LINE L1 -610 6044 5875 5 1799 2271 83 13 0 chrX 159182300 159182600 -7467696 + L1_Mm LINE L1 5453 5756 -127 5 1799 25 0 0 0 chrX 159182600 159182625 -7467671 + AT_rich Low_complexity Low_complexity 1 25 0 5 1799 290 242 186 32 chrX 159182653 159182665 -7467631 + B4A SINE B4 85 226 -65 5 1799 515 218 27 9 chrX 159182665 159182776 -7467520 + PB1D7 SINE Alu 8 120 0 5 1799 856 146 22 0 chrX 159182926 159183063 -7467233 + B1_Mus1 SINE Alu 1 140 -8 5 1799 201 196 0 0 chrX 159183063 159183114 -7467182 + GA-rich Low_complexity Low_complexity 1 51 0 5 1799 585 177 39 31 chrX 159183479 159183607 -7466689 - B1F SINE Alu -2 147 19 5 1799 256 213 27 153 chrX 159183611 159183630 -7466666 - MT2B LTR ERVL -320 281 264 5 1799 225 0 0 0 chrX 159183630 159183655 -7466641 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 1799 475 232 0 0 chrX 159183659 159183758 -7466538 - PB1D9 SINE Alu -12 108 10 5 1799 256 213 27 153 chrX 159183758 159183785 -7466511 - MT2B LTR ERVL -338 259 151 5 1799 787 245 0 12 chrX 159184244 159184405 -7465891 - RSINE1 SINE B4 -4 161 3 5 1799 1750 259 183 40 chrX 159184433 159185115 -7465181 + Lx8 LINE L1 6309 7088 -385 5 1799 4166 114 9 27 chrX 159185163 159185826 -7464470 + Lx2 LINE L1 6013 6644 -337 5 1799 1459 79 18 14 chrX 159185826 159186045 -7464251 + Lx2 LINE L1 6775 6994 -3 5 1799 557 190 189 8 chrX 159186351 159186473 -7463823 + B1_Mur2 SINE Alu 3 146 -3 5 1799 208 53 53 0 chrX 159186618 159186656 -7463640 + (CAAAAA)n Simple_repeat Simple_repeat 4 43 0 5 1799 198 0 0 0 chrX 159186654 159186676 -7463620 + (CCA)n Simple_repeat Simple_repeat 1 22 0 5 1799 414 0 0 0 chrX 159187451 159187497 -7462799 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1799 289 278 125 0 chrX 159187504 159187576 -7462720 + PB1D10 SINE Alu 1 81 -36 5 1799 687 280 62 20 chrX 159187790 159188034 -7462262 - L1MC2 LINE L1 -130 6214 5961 5 1799 356 266 26 26 chrX 159188038 159188154 -7462142 - PB1D10 SINE Alu -1 116 1 5 1799 641 132 57 16 chrX 159188199 159188322 -7461974 - B1_Mus1 SINE Alu -2 146 19 5 1799 245 125 0 0 chrX 159188538 159188578 -7461718 - ID SINE ID -181 43 4 5 1799 264 288 58 17 chrX 159188578 159188698 -7461598 - L1MD LINE L1 -529 5830 5706 5 1799 458 275 45 15 chrX 159188713 159188846 -7461450 - RSINE1 SINE B4 -13 152 16 5 1799 392 68 34 0 chrX 159188856 159188915 -7461381 + (TTTC)n Simple_repeat Simple_repeat 2 62 0 5 1799 611 162 13 66 chrX 159188915 159188926 -7461370 - ID_B1 SINE B4 0 224 86 5 1799 1032 59 0 0 chrX 159188926 159189062 -7461234 - B1_Mm SINE Alu -6 141 6 5 1799 243 296 10 10 chrX 159189111 159189124 -7461172 + polypurine Low_complexity Low_complexity 2 14 0 5 1799 777 144 20 33 chrX 159189124 159189275 -7461021 + B1_Mur2 SINE Alu 1 149 0 5 1799 243 296 10 10 chrX 159189275 159189360 -7460936 + GA-rich Low_complexity Low_complexity 15 99 0 5 1799 250 298 0 0 chrX 159189286 159189343 -7460953 + polypurine Low_complexity Low_complexity 3 59 0 5 1799 763 216 25 56 chrX 159189360 159189556 -7460740 + B3 SINE B2 1 190 -26 5 1799 207 0 0 0 chrX 159189557 159189580 -7460716 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1799 280 214 84 14 chrX 159189775 159189846 -7460450 - ID4_ SINE ID -3 80 5 5 1799 1186 50 0 0 chrX 159191321 159191461 -7458835 - B1_Mus1 SINE Alu -8 140 1 5 1799 310 277 23 35 chrX 159191476 159191562 -7458734 + BC1_Mm scRNA scRNA 4 88 -64 5 1799 553 206 136 17 chrX 159191622 159191827 -7458469 + L1MA7 LINE L1 6046 6258 -42 5 1799 315 0 0 0 chrX 159191827 159191862 -7458434 + (TA)n Simple_repeat Simple_repeat 1 35 0 5 1799 553 157 163 0 chrX 159191862 159191894 -7458402 + L1MA7 LINE L1 6250 6290 -1 5 1799 456 196 20 40 chrX 159191918 159192019 -7458277 + PB1D10 SINE Alu 13 111 -6 5 1799 614 13 13 0 chrX 159192028 159192103 -7458193 + (GGAAA)n Simple_repeat Simple_repeat 4 79 0 5 1799 450 248 48 20 chrX 159192109 159192241 -7458055 + B1F2 SINE Alu 2 121 -28 5 1799 1132 76 0 0 chrX 159192963 159193107 -7457189 + B1_Mus1 SINE Alu 2 145 -3 5 1799 2575 100 46 12 chrX 159193132 159193548 -7456748 - MT2B2 LTR ERVL 0 584 155 5 1799 1454 42 5 0 chrX 159193544 159193733 -7456563 - B2_Mm1t SINE B2 -3 190 1 5 1799 1204 82 0 12 chrX 159193733 159193903 -7456393 - MT2B2 LTR ERVL -416 168 1 5 1799 663 203 124 28 chrX 159193903 159194080 -7456216 - B3 SINE B2 -14 202 9 5 1799 655 241 66 66 chrX 159195174 159195432 -7454864 - B4A SINE B4 -26 266 9 5 1799 327 305 86 0 chrX 159195742 159195870 -7454426 + ID_B1 SINE B4 86 224 0 5 1799 1139 57 0 7 chrX 159196025 159196166 -7454130 + B1_Mus1 SINE Alu 1 140 -8 5 1799 255 212 88 29 chrX 159196201 159196269 -7454027 + ID4 SINE ID 4 75 -8 5 1799 378 0 0 0 chrX 159196273 159196315 -7453981 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1799 258 200 32 96 chrX 159196396 159196490 -7453806 - PB1D10 SINE Alu -6 111 24 5 1799 686 279 87 9 chrX 159196652 159196883 -7453413 + MER58B DNA MER1_type 5 253 -88 5 1799 204 97 0 0 chrX 159197978 159198009 -7452287 + (CCG)n Simple_repeat Simple_repeat 3 33 0 5 1799 25 51 0 0 chrX 159198093 159198132 -7452164 + GC_rich Low_complexity Low_complexity 1 39 0 5 1799 198 0 0 0 chrX 159198887 159198909 -7451387 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 5 1799 1523 52 0 30 chrX 159200276 159200473 -7449823 - B2_Mm1a SINE B2 0 193 3 5 1799 229 250 15 59 chrX 159200821 159200889 -7449407 - ID4 SINE ID -2 81 17 5 1799 512 291 87 7 chrX 159200919 159201068 -7449228 + RSINE1 SINE B4 3 163 -2 5 1799 1245 67 83 17 chrX 159201182 159201363 -7448933 - B2_Mm2 SINE B2 -2 193 1 5 1799 460 213 45 117 chrX 159201385 159201539 -7448757 - B1_Mur4 SINE Alu -6 144 2 5 1799 473 270 40 26 chrX 159201575 159201727 -7448569 + B3 SINE B2 2 155 -61 5 1799 1154 79 76 33 chrX 159201952 159201978 -7448318 - B2_Mm2 SINE B2 -2 193 172 5 1799 1024 91 35 7 chrX 159201978 159202122 -7448174 - B1_Mus1 SINE Alu 0 148 1 5 1799 1154 79 76 33 chrX 159202122 159202279 -7448017 - B2_Mm2 SINE B2 -24 171 2 5 1799 793 83 44 36 chrX 159202584 159202721 -7447575 - B2_Mm2 SINE B2 -56 139 2 5 1799 660 200 56 28 chrX 159202721 159202865 -7447431 - B1F1 SINE Alu 0 149 2 5 1799 1654 42 0 0 chrX 159203388 159203580 -7446716 + B2_Mm1a SINE B2 2 193 0 5 1799 276 284 0 0 chrX 159203674 159203741 -7446555 - ID4_ SINE ID -1 82 16 5 1799 778 116 65 0 chrX 159203959 159204097 -7446199 - B2_Mm2 SINE B2 -3 192 46 5 1799 426 189 213 39 chrX 159204127 159204254 -7446042 + B1F2 SINE Alu 1 149 0 5 1799 266 258 66 90 chrX 159204296 159204462 -7445834 - L1MC LINE L1 -2058 5824 5663 5 1799 526 231 28 69 chrX 159204522 159204666 -7445630 - B1_Mur1 SINE Alu -10 139 2 5 1799 1249 124 16 0 chrX 159204743 159204929 -7445367 + B2_Mm2 SINE B2 1 189 -6 5 1799 492 146 0 12 chrX 159204939 159205022 -7445274 - B1_Mus1 SINE Alu -56 92 11 5 1799 272 319 0 42 chrX 159205390 159205462 -7444834 - ID4 SINE ID -13 70 2 5 1799 278 321 14 84 chrX 159205469 159205612 -7444684 - ID_B1 SINE B4 0 224 92 6 1799 936 110 14 29 chrX 159207061 159207201 -7443095 - B1_Mus1 SINE Alu -10 138 1 6 1799 469 155 11 35 chrX 159207953 159208040 -7442256 + B3 SINE B2 3 87 -129 6 1799 195 69 0 0 chrX 159208690 159208719 -7441577 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 6 1799 923 98 0 29 chrX 159208719 159208856 -7441440 - B1_Mus2 SINE Alu -13 134 2 6 1799 180 0 0 0 chrX 159209245 159209265 -7441031 + (T)n Simple_repeat Simple_repeat 1 20 0 6 1799 1002 90 0 0 chrX 159209265 159209409 -7440887 - B1_Mus1 SINE Alu 0 148 5 6 1799 371 242 0 152 chrX 159209310 159209461 -7440835 - MT2B LTR ERVL -344 257 130 6 1799 1143 269 78 28 chrX 159209633 159210057 -7440239 - Lx8 LINE L1 -703 6770 6326 6 1799 840 55 0 0 chrX 159210662 159210772 -7439524 - B2_Mm2 SINE B2 -83 112 3 6 1799 356 346 6 42 chrX 159211495 159211661 -7438635 - RSINE1 SINE B4 -2 163 4 6 1799 1262 34 0 0 chrX 159211740 159211888 -7438408 - B1_Mus1 SINE Alu 0 148 1 6 1799 370 256 169 56 chrX 159212745 159212923 -7437373 - B3 SINE B2 -17 199 2 6 1799 332 224 104 0 chrX 159212991 159213058 -7437238 + ID4_ SINE ID 5 78 -5 6 1799 947 152 79 25 chrX 159213361 159213564 -7436732 - URR1B DNA MER1_type -5 220 7 6 1799 570 320 39 17 chrX 159214655 159214833 -7435463 + B3A SINE B2 1 182 -16 6 1799 238 212 73 29 chrX 159218284 159218352 -7431944 - ID4 SINE ID -1 82 12 6 1799 432 202 289 0 chrX 159219570 159219674 -7430622 - B1_Mus1 SINE Alu -13 135 2 6 1799 398 248 86 0 chrX 159219874 159219979 -7430317 - B1_Mur1 SINE Alu -1 148 35 6 1799 577 204 134 59 chrX 159220306 159220493 -7429803 - B3 SINE B2 -5 211 11 6 1799 284 280 40 0 chrX 159220638 159220713 -7429583 - B1_Mus1 SINE Alu -41 107 30 6 1799 358 250 0 50 chrX 159221227 159221328 -7428968 + RSINE1 SINE B4 38 133 -32 6 1799 459 234 125 7 chrX 159221394 159221549 -7428747 - B3A SINE B2 -9 186 10 6 1799 219 311 0 0 chrX 159221769 159221830 -7428466 + PB1 SINE Alu 42 102 -25 6 1799 893 121 163 0 chrX 159221899 159222065 -7428231 - B2_Mm2 SINE B2 -2 193 1 6 1799 374 226 0 12 chrX 159222797 159222882 -7427414 + B3 SINE B2 21 104 -112 6 1799 224 132 0 131 chrX 159225166 159225227 -7425069 + PB1D9 SINE Alu 67 119 -1 6 1799 263 169 82 33 chrX 159225311 159225372 -7424924 + PB1D9 SINE Alu 2 65 -55 6 1799 772 176 0 29 chrX 159226410 159226576 -7423720 + B3 SINE B2 1 152 -41 6 1799 352 258 1 0 chrX 159226630 159226709 -7423587 + B1_Mur2 SINE Alu 51 130 -19 6 1799 444 190 149 97 chrX 159226911 159227045 -7423251 + B3A SINE B2 20 160 -38 6 1799 965 179 71 5 chrX 159227149 159227345 -7422951 + B3 SINE B2 1 209 -7 6 1799 441 303 32 32 chrX 159227414 159227571 -7422725 + B3A SINE B2 55 211 -5 6 1799 180 0 0 0 chrX 159227635 159227655 -7422641 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 6 1799 276 295 42 0 chrX 159227655 159227750 -7422546 + B1F SINE Alu 22 120 -29 6 1799 262 267 139 0 chrX 159227769 159227784 -7422512 + B4A SINE B4 70 96 -196 6 1799 587 130 100 0 chrX 159227784 159227884 -7422412 + B1_Mur3 SINE Alu 2 111 -38 6 1799 426 183 42 42 chrX 159228805 159228925 -7421371 + B1F SINE Alu 30 149 0 6 1799 376 312 80 0 chrX 159228929 159229041 -7421255 + B4A SINE B4 7 127 -165 6 1799 1119 103 6 0 chrX 159229401 159229566 -7420730 + B2_Mm1t SINE B2 2 167 -26 6 1799 237 211 0 0 chrX 159229627 159229679 -7420617 + B2_Mm2 SINE B2 47 98 -97 6 1799 198 103 0 0 chrX 159229701 159229730 -7420566 + (TAAG)n Simple_repeat Simple_repeat 3 31 0 6 1799 266 339 0 53 chrX 159229753 159229788 -7420508 - ID_B1 SINE B4 -10 214 91 6 1799 278 330 0 21 chrX 159229788 159229884 -7420412 - PB1D10 SINE Alu -14 103 10 6 1799 648 249 89 52 chrX 159229926 159230117 -7420179 + B3 SINE B2 2 199 -17 6 1799 447 250 19 0 chrX 159230171 159230275 -7420021 + B3A SINE B2 1 106 -92 6 1799 28 0 0 0 chrX 159230335 159230363 -7419933 + AT_rich Low_complexity Low_complexity 1 28 0 6 1799 684 170 33 2 chrX 159230368 159230537 -7419759 + B2_Mm2 SINE B2 1 186 -7 6 1799 1307 86 17 0 chrX 159230546 159230721 -7419575 + B2_Mm2 SINE B2 4 181 -14 6 1799 636 255 12 30 chrX 159231249 159231415 -7418881 + B3 SINE B2 8 170 -46 6 1799 11281 51 9 2 chrX 159231416 159231437 -7418859 + L1Md_F2 LINE L1 4006 4025 -1858 6 1799 889 121 61 0 chrX 159231437 159231569 -7418727 + B1_Mur4 SINE Alu 2 141 -9 6 1799 11281 51 9 2 chrX 159231569 159232957 -7417339 + L1Md_F2 LINE L1 4026 5424 -459 6 1799 6857 60 11 1 chrX 159232957 159233811 -7416485 + L1Md_F2 LINE L1 5709 6570 -12 6 1799 8597 154 7 85 chrX 159233811 159234111 -7416185 + L1_Mur2 LINE L1 5328 5580 -297 6 1799 8490 38 2 0 chrX 159234112 159235105 -7415191 + L1Md_T LINE L1 5588 6582 0 6 1799 288 127 0 0 chrX 159235283 159235338 -7414958 + (TTTC)n Simple_repeat Simple_repeat 3 57 0 6 1799 369 0 0 0 chrX 159235341 159235382 -7414914 + (TTTTC)n Simple_repeat Simple_repeat 2 42 0 6 1799 674 136 18 9 chrX 159235388 159235499 -7414797 - PB1D9 SINE Alu -5 115 4 6 1799 368 203 85 2 chrX 159235843 159235949 -7414347 - PB1D10 SINE Alu 0 120 5 6 1799 471 225 42 42 chrX 159236075 159236219 -7414077 + B1F SINE Alu 6 149 0 6 1799 320 296 14 0 chrX 159236283 159236354 -7413942 + B3A SINE B2 97 168 -30 6 1799 1169 75 0 7 chrX 159236860 159237008 -7413288 - B1_Mm SINE Alu 0 147 1 6 1799 1451 69 15 41 chrX 159237170 159237367 -7412929 + B2_Mm2 SINE B2 2 193 -2 6 1799 986 31 0 0 chrX 159237367 159237495 -7412801 + B1_Mm SINE Alu 20 147 0 6 1799 791 223 11 201 chrX 159237547 159237811 -7412485 + B3 SINE B2 1 214 -2 6 1799 1371 29 94 0 chrX 159237835 159238005 -7412291 + B2_Mm1a SINE B2 2 187 -6 6 1799 379 203 148 63 chrX 159238070 159238212 -7412084 + RSINE1 SINE B4 12 165 0 6 1799 300 314 78 31 chrX 159238535 159238663 -7411633 + ID_B1 SINE B4 86 219 -5 6 1799 495 0 0 0 chrX 159239765 159239820 -7410476 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 6 1799 1108 82 6 0 chrX 159239820 159239978 -7410318 - B2_Mm1a SINE B2 -34 159 1 6 1799 526 154 85 19 chrX 159240027 159240133 -7410163 - PB1D9 SINE Alu -2 118 6 6 1799 683 221 0 22 chrX 159240177 159240316 -7409980 + B1_Mus2 SINE Alu 1 136 -11 6 1799 1209 150 5 0 chrX 159240373 159240566 -7409730 + B2_Mm2 SINE B2 2 195 0 6 1799 429 261 0 0 chrX 159240774 159240866 -7409430 + B3A SINE B2 53 144 -54 6 1799 1191 48 0 0 chrX 159241050 159241196 -7409100 - B1_Mus2 SINE Alu 0 147 2 6 1799 786 196 17 23 chrX 159241253 159241425 -7408871 + B2_Mm2 SINE B2 2 172 -23 6 1799 645 180 0 138 chrX 159241470 159241644 -7408652 + B1_Mur4 SINE Alu 1 150 0 6 1799 462 209 0 54 chrX 159241660 159241771 -7408525 + PB1D9 SINE Alu 3 107 -13 6 1799 243 257 25 125 chrX 159242003 159242083 -7408213 - ID4 SINE ID -10 73 2 6 1799 814 198 75 45 chrX 159242113 159242314 -7407982 - B3 SINE B2 -9 207 1 6 1799 292 224 17 0 chrX 159242418 159242476 -7407820 - ID4_ SINE ID -23 60 2 6 1799 329 297 87 35 chrX 159242478 159242593 -7407703 - PB1 SINE Alu -2 125 5 6 1799 356 235 37 93 chrX 159242696 159242780 -7407516 - RSINE1 SINE B4 -61 104 20 6 1799 1110 133 44 0 chrX 159242780 159242961 -7407335 - B2_Mm2 SINE B2 -6 189 1 6 1799 356 235 37 93 chrX 159242961 159242984 -7407312 - RSINE1 SINE B4 -146 19 3 6 1799 594 256 8 0 chrX 159243002 159243119 -7407177 - PB1D7 SINE Alu 0 120 3 6 1799 434 43 29 0 chrX 159243150 159243219 -7407077 - B1_Mus2 SINE Alu 0 147 77 6 1799 316 71 0 0 chrX 159243260 159243302 -7406994 + B1_Mus1 SINE Alu 1 42 -106 6 1799 269 297 84 56 chrX 159243298 159243405 -7406891 - B3A SINE B2 -73 125 16 6 1799 419 259 0 82 chrX 159243462 159243609 -7406687 + B4A SINE B4 17 151 -141 6 1799 943 122 92 6 chrX 159243654 159243827 -7406469 + B2_Mm2 SINE B2 1 188 -7 6 1799 342 205 38 13 chrX 159243945 159244024 -7406272 + B1_Mur2 SINE Alu 69 149 0 6 1799 603 207 100 35 chrX 159244102 159244272 -7406024 - ID_B1 SINE B4 -3 221 41 6 1799 257 200 55 0 chrX 159244229 159244284 -7406012 - ID4_ SINE ID -1 82 25 6 1799 195 184 0 0 chrX 159244327 159244365 -7405931 + CT-rich Low_complexity Low_complexity 1 38 0 6 1799 1317 81 48 11 chrX 159244467 159244654 -7405642 + B2_Mm2 SINE B2 1 194 -1 6 1799 1163 48 7 0 chrX 159244655 159244800 -7405496 + B1_Mus2 SINE Alu 2 147 0 6 1799 743 112 34 8 chrX 159244813 159244930 -7405366 + PB1D9 SINE Alu 1 120 0 6 1799 525 286 0 58 chrX 159245071 159245227 -7405069 + B1_Mur1 SINE Alu 1 147 -2 6 1799 276 219 0 15 chrX 159245703 159245768 -7404528 + PB1D10 SINE Alu 51 114 -3 6 1799 1341 88 22 0 chrX 159246028 159246209 -7404087 + B2_Mm1t SINE B2 1 185 -8 6 1799 839 75 237 58 chrX 159246221 159246377 -7403919 - B2_Mm1t SINE B2 -8 185 2 6 1799 587 153 94 24 chrX 159246690 159246817 -7403479 - B1_Mus2 SINE Alu 0 147 12 7 1799 240 254 96 126 chrX 159246721 159246856 -7403440 - MT2B LTR ERVL -337 264 134 7 1799 21 0 0 0 chrX 159246981 159247002 -7403294 + AT_rich Low_complexity Low_complexity 1 21 0 7 1799 463 252 87 0 chrX 159247002 159247105 -7403191 - PB1 SINE Alu -3 124 13 7 1799 269 156 0 0 chrX 159247181 159247226 -7403070 - L1MB7 LINE L1 -79 6105 6061 7 1799 516 155 10 10 chrX 159247230 159247334 -7402962 - BC1_Mm scRNA scRNA -47 105 2 7 1799 212 163 0 0 chrX 159247341 159247384 -7402912 + (TTTG)n Simple_repeat Simple_repeat 3 45 0 7 1799 1245 48 0 0 chrX 159247385 159247531 -7402765 - B1_Mus2 SINE Alu -1 146 1 7 1799 520 211 28 19 chrX 159247568 159247674 -7402622 + ID_B1 SINE B4 117 223 -1 7 1799 357 240 17 25 chrX 159247722 159247841 -7402455 + B1_Mur2 SINE Alu 1 148 -1 7 1799 416 190 158 47 chrX 159247879 159248006 -7402290 + B1_Mur1 SINE Alu 9 149 0 7 1799 280 296 58 139 chrX 159248074 159248282 -7402014 + ID_B1 SINE B4 34 224 0 7 1799 1651 26 11 0 chrX 159248418 159248608 -7401688 + B2_Mm1a SINE B2 2 193 0 7 1799 459 113 58 2 chrX 159248647 159248739 -7401557 - B1_Mus2 SINE Alu 0 147 28 7 1799 387 0 0 0 chrX 159248957 159249000 -7401296 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 1799 342 171 113 14 chrX 159249033 159249104 -7401192 - RSINE1 SINE B4 -85 80 3 7 1799 295 361 91 32 chrX 159250134 159250354 -7399942 + MLT1J2 LTR MaLR 197 429 -19 7 1799 195 69 0 0 chrX 159250387 159250416 -7399880 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1799 459 78 0 72 chrX 159250420 159250503 -7399793 + B1_Mus2 SINE Alu 1 77 -70 7 1799 1030 119 0 0 chrX 159250530 159250681 -7399615 - B2_Mm2 SINE B2 -43 152 2 7 1799 655 270 0 13 chrX 159250873 159251027 -7399269 - RSINE1 SINE B4 -2 163 12 7 1799 543 227 39 89 chrX 159251051 159251254 -7399042 + B3A SINE B2 2 194 -4 7 1799 1390 50 27 32 chrX 159251263 159251450 -7398846 + B2_Mm1a SINE B2 2 187 -6 7 1799 405 338 8 0 chrX 159251599 159251732 -7398564 - ID_B1 SINE B4 -1 223 90 7 1799 299 290 181 28 chrX 159251734 159252033 -7398263 + L1ME3A LINE L1 5567 5909 -264 7 1799 1160 64 0 0 chrX 159252033 159252174 -7398122 + B1_Mus1 SINE Alu 2 142 -6 7 1799 1576 52 5 5 chrX 159252255 159252449 -7397847 + B2_Mm2 SINE B2 1 194 -1 7 1800 1232 48 0 0 chrX 159252582 159252728 -7397568 - B1_Mus2 SINE Alu 0 147 2 7 1800 236 224 0 0 chrX 159252773 159252822 -7397474 + B1_Mus2 SINE Alu 1 49 -98 7 1800 508 309 40 0 chrX 159252862 159253011 -7397285 + B3A SINE B2 1 155 -43 7 1800 240 86 0 0 chrX 159253013 159253048 -7397248 + (TC)n Simple_repeat Simple_repeat 2 36 0 7 1800 528 30 0 0 chrX 159253048 159253114 -7397182 + (CA)n Simple_repeat Simple_repeat 1 66 0 7 1800 744 148 16 0 chrX 159253123 159253245 -7397051 - B1_Mur2 SINE Alu -20 129 6 7 1800 418 311 53 0 chrX 159253142 159253274 -7397022 - B4 SINE B4 -94 198 60 7 1800 1091 158 322 27 chrX 159253416 159253708 -7396588 + ORR1C1 LTR MaLR 1 378 0 7 1800 341 154 37 1 chrX 159253867 159253951 -7396345 - B3 SINE B2 -76 119 25 7 1800 1181 56 0 0 chrX 159254292 159254436 -7395860 + B1_Mus1 SINE Alu 5 148 0 7 1800 192 77 0 0 chrX 159254438 159254464 -7395832 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 7 1800 1208 39 0 0 chrX 159254522 159254677 -7395619 + B2_Mm1a SINE B2 1 155 -38 7 1800 456 86 0 0 chrX 159254678 159254748 -7395548 + (TAAA)n Simple_repeat Simple_repeat 3 72 0 7 1800 1146 258 111 30 chrX 159254820 159255580 -7394716 - L1MB7 LINE L1 -144 6040 5213 7 1800 1347 92 16 5 chrX 159255585 159255771 -7394525 - B2_Mm2 SINE B2 -7 188 1 7 1800 1193 49 14 0 chrX 159255838 159255982 -7394314 - B1_Mm SINE Alu 0 147 2 7 1800 411 299 43 0 chrX 159256034 159256151 -7394145 + RSINE1 SINE B4 19 140 -25 7 1800 549 256 37 8 chrX 159256195 159256329 -7393967 + B1F2 SINE Alu 4 141 -8 7 1800 363 243 125 9 chrX 159256346 159256458 -7393838 + B1_Mur4 SINE Alu 7 131 -19 7 1800 189 167 0 0 chrX 159256460 159256478 -7393818 + A-rich Low_complexity Low_complexity 1 18 0 7 1800 1179 68 0 0 chrX 159256478 159256625 -7393671 + B1_Mus2 SINE Alu 1 147 0 7 1800 189 167 0 0 chrX 159256625 159256648 -7393648 + A-rich Low_complexity Low_complexity 19 41 0 7 1800 591 283 157 8 chrX 159256694 159256936 -7393360 + B4A SINE B4 8 285 -7 7 1800 957 18 0 0 chrX 159256956 159257067 -7393229 + (GA)n Simple_repeat Simple_repeat 2 112 0 7 1800 289 240 615 92 chrX 159257069 159257199 -7393097 + B4A SINE B4 95 292 0 7 1800 821 161 14 27 chrX 159257319 159257466 -7392830 + B1_Mur3 SINE Alu 1 145 -4 7 1800 257 235 68 135 chrX 159257468 159257601 -7392695 + MT2B LTR ERVL 134 257 -344 7 1800 644 184 29 14 chrX 159257504 159257642 -7392654 + B1_Mur1 SINE Alu 10 149 0 7 1800 385 289 76 21 chrX 159257680 159257825 -7392471 + RSINE1 SINE B4 13 165 0 7 1800 475 80 120 0 chrX 159258014 159258089 -7392207 - B1_Mur4 SINE Alu 0 150 67 7 1800 660 183 99 0 chrX 159258089 159258220 -7392076 - B1_Mur4 SINE Alu -4 146 3 7 1800 356 263 32 41 chrX 159258624 159258747 -7391549 + ID_B1 SINE B4 49 170 -54 7 1800 214 319 75 0 chrX 159258678 159258772 -7391524 + PB1D10 SINE Alu 17 117 0 7 1800 233 331 117 0 chrX 159258876 159259039 -7391257 - MIR SINE MIR -36 226 45 7 1800 754 27 205 0 chrX 159259282 159259394 -7390902 + B1_Mus1 SINE Alu 14 148 0 7 1800 257 222 0 18 chrX 159259447 159259502 -7390794 + tRNA-Ala-GCY_ tRNA tRNA 4 57 -18 7 1800 240 267 0 16 chrX 159259452 159259513 -7390783 + BC1_Mm scRNA scRNA 15 74 -78 7 1800 953 56 0 53 chrX 159259518 159259668 -7390628 - B1_Mm SINE Alu 0 147 6 7 1800 246 146 0 0 chrX 159259638 159259679 -7390617 - MT2C_Mm LTR ERVL -235 240 200 7 1800 23 0 0 0 chrX 159259723 159259746 -7390550 + AT_rich Low_complexity Low_complexity 1 23 0 7 1800 2666 48 0 6 chrX 159259881 159260214 -7390082 + L1Md_F2 LINE L1 6252 6582 0 7 1800 1623 42 0 0 chrX 159260223 159260414 -7389882 + B2_Mm1a SINE B2 1 191 -2 7 1800 810 0 0 0 chrX 159260608 159260698 -7389598 + (GAGAA)n Simple_repeat Simple_repeat 4 93 0 7 1800 1130 90 39 6 chrX 159260914 159261092 -7389204 + B2_Mm2 SINE B2 1 184 -11 7 1800 1197 41 7 0 chrX 159261103 159261249 -7389047 + B1_Mm SINE Alu 1 147 0 7 1800 272 264 27 0 chrX 159261333 159261443 -7388853 - Charlie1a DNA MER1_type -52 1403 1291 7 1800 1564 53 0 5 chrX 159261453 159261643 -7388653 + B2_Mm1a SINE B2 1 189 -4 7 1800 629 284 125 37 chrX 159261670 159262047 -7388249 - MLT1F2 LTR MaLR -22 538 129 7 1800 1052 75 7 27 chrX 159262081 159262231 -7388065 - B1_Mus2 SINE Alu 0 147 1 7 1800 1141 62 7 0 chrX 159262337 159262481 -7387815 + B1_Mus1 SINE Alu 3 147 -1 7 1800 235 317 112 42 chrX 159262758 159262972 -7387324 - MIRb SINE MIR -32 236 8 7 1800 226 347 40 13 chrX 159263024 159263176 -7387120 + MIRc SINE MIR 93 248 -20 7 1800 517 236 176 24 chrX 159263258 159263423 -7386873 - B3A SINE B2 -3 195 6 7 1800 1003 84 28 7 chrX 159263478 159263621 -7386675 + B1_Mus1 SINE Alu 3 148 0 7 1800 459 302 0 0 chrX 159263772 159263878 -7386418 + PB1D10 SINE Alu 6 111 -6 7 1800 364 246 227 15 chrX 159263890 159264022 -7386274 + RSINE1 SINE B4 4 163 -2 7 1800 207 0 0 0 chrX 159264031 159264054 -7386242 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1800 506 251 179 8 chrX 159264073 159264323 -7385973 + L1MC2 LINE L1 5961 6287 -57 7 1800 593 133 0 39 chrX 159264347 159264449 -7385847 - B1_Mus2 SINE Alu -1 146 49 7 1800 281 200 0 0 chrX 159264765 159264820 -7385476 + PB1 SINE Alu 62 116 -11 7 1800 481 248 50 0 chrX 159265688 159265829 -7384467 + B1F SINE Alu 2 149 0 7 1800 259 296 12 0 chrX 159268389 159268470 -7381826 - ID4_ SINE ID 0 83 2 7 1800 249 33 0 0 chrX 159268486 159268516 -7381780 + (T)n Simple_repeat Simple_repeat 1 30 0 7 1800 1137 96 0 0 chrX 159268516 159268662 -7381634 - B1_Mus2 SINE Alu 0 147 2 7 1800 249 33 0 0 chrX 159268687 159268717 -7381579 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 7 1800 906 115 45 0 chrX 159268742 159268899 -7381397 - B2_Mm2 SINE B2 -4 191 28 7 1800 616 206 55 28 chrX 159268992 159269137 -7381159 + B1_Mur1 SINE Alu 1 149 0 7 1800 188 67 33 0 chrX 159269139 159269169 -7381127 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 7 1800 258 148 33 0 chrX 159269169 159269236 -7381060 + B1_Mur4 SINE Alu 79 150 0 7 1800 552 111 20 0 chrX 159269410 159269509 -7380787 + B1_Mm SINE Alu 46 146 -1 7 1800 339 125 0 111 chrX 159269520 159269592 -7380704 + B1_Mur1 SINE Alu 74 137 -12 7 1800 668 203 30 8 chrX 159269844 159269978 -7380318 - B1_Mur4 SINE Alu -1 149 13 7 1800 299 256 74 101 chrX 159269845 159269993 -7380303 - B4 SINE B4 -69 223 80 7 1800 225 0 0 0 chrX 159270023 159270048 -7380248 + (TTCCC)n Simple_repeat Simple_repeat 2 26 0 8 1800 604 272 0 0 chrX 159270397 159270533 -7379763 + B3A SINE B2 1 136 -62 8 1800 1202 54 0 0 chrX 159270549 159270696 -7379600 - B1_Mm SINE Alu 0 147 1 8 1800 321 234 10 21 chrX 159270818 159270914 -7379382 - BC1_Mm scRNA scRNA -56 96 2 8 1800 382 271 9 45 chrX 159271197 159271309 -7378987 - PB1D7 SINE Alu -7 113 6 8 1800 1013 76 0 7 chrX 159271331 159271476 -7378820 + (TTTC)n Simple_repeat Simple_repeat 3 146 0 8 1800 522 270 29 21 chrX 159271476 159271610 -7378686 - B1_Mur1 SINE Alu -13 136 1 8 1800 252 0 0 0 chrX 159271656 159271684 -7378612 + (GA)n Simple_repeat Simple_repeat 1 28 0 8 1800 203 295 16 0 chrX 159271916 159271977 -7378319 + L2a LINE L2 3355 3416 -10 8 1800 466 279 0 0 chrX 159272009 159272120 -7378176 + PB1D7 SINE Alu 4 114 -6 8 1800 832 249 21 144 chrX 159272137 159272179 -7378117 + B4 SINE B4 1 37 -255 8 1800 1022 79 50 0 chrX 159272179 159272318 -7377978 + B1_Mm SINE Alu 2 147 0 8 1800 832 249 21 144 chrX 159272318 159272391 -7377905 + B4 SINE B4 38 86 -206 8 1800 690 230 122 30 chrX 159272391 159272588 -7377708 + B3 SINE B2 2 216 0 8 1800 832 249 21 144 chrX 159272588 159272804 -7377492 + B4 SINE B4 87 292 0 8 1800 360 305 0 111 chrX 159273117 159273261 -7377035 + ID_B1 SINE B4 81 208 -16 8 1800 1319 67 6 0 chrX 159273263 159273442 -7376854 + (GAA)n Simple_repeat Simple_repeat 1 180 0 8 1800 540 291 21 14 chrX 159273450 159273593 -7376703 + RSINE1 SINE B4 8 151 -14 8 1800 189 0 0 0 chrX 159273604 159273625 -7376671 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 1800 358 272 0 11 chrX 159273647 159273740 -7376556 + PB1D10 SINE Alu 21 112 -5 8 1800 1272 86 39 22 chrX 159273866 159274044 -7376252 + B2_Mm2 SINE B2 1 181 -14 8 1800 1047 54 0 0 chrX 159274061 159274190 -7376106 + B1_Mus1 SINE Alu 1 129 -19 8 1800 351 278 103 0 chrX 159274286 159274383 -7375913 + PB1D10 SINE Alu 3 109 -8 8 1800 1108 70 28 0 chrX 159274391 159274534 -7375762 + B1_Mus2 SINE Alu 1 147 0 8 1800 232 295 93 21 chrX 159274906 159275003 -7375293 - LTR50 LTR ERVL -591 204 101 8 1800 383 248 101 94 chrX 159275084 159275173 -7375123 + B1F1 SINE Alu 11 100 -49 8 1800 216 0 0 0 chrX 159275173 159275197 -7375099 + (CAGGC)n Simple_repeat Simple_repeat 5 28 0 8 1800 383 248 101 94 chrX 159275197 159275245 -7375051 + B1F1 SINE Alu 101 149 0 8 1800 1113 68 14 0 chrX 159275249 159275395 -7374901 + B1_Mus1 SINE Alu 1 148 0 8 1800 399 41 0 0 chrX 159275698 159275747 -7374549 + (TA)n Simple_repeat Simple_repeat 1 49 0 8 1800 1620 147 42 26 chrX 159275772 159276079 -7374217 - L1MB5 LINE L1 -8 6166 5855 8 1800 388 300 35 14 chrX 159276664 159276806 -7373490 + L1MA4 LINE L1 5783 5927 -373 8 1800 350 256 151 0 chrX 159276833 159276919 -7373377 - B1F SINE Alu -49 100 2 8 1800 201 303 26 0 chrX 159276919 159276995 -7373301 + (TA)n Simple_repeat Simple_repeat 2 79 0 8 1800 478 275 8 8 chrX 159277147 159277279 -7373017 - RSINE1 SINE B4 -29 136 5 8 1800 697 223 0 0 chrX 159277358 159277497 -7372799 - B1F SINE Alu -5 144 6 8 1800 1223 28 7 7 chrX 159277593 159277739 -7372557 + B1_Mus1 SINE Alu 2 147 -1 8 1800 360 106 11 23 chrX 159277754 159277804 -7372492 + (TAAAA)n Simple_repeat Simple_repeat 2 51 0 8 1800 1214 61 0 0 chrX 159277804 159277951 -7372345 + B1_Mus2 SINE Alu 1 147 0 8 1800 360 106 11 23 chrX 159277951 159277987 -7372309 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 8 1800 1142 88 0 0 chrX 159278053 159278201 -7372095 - B1_Mus1 SINE Alu 0 148 1 8 1800 204 170 21 21 chrX 159278261 159278309 -7371987 + (TCTCTG)n Simple_repeat Simple_repeat 5 52 0 8 1800 275 279 261 0 chrX 159278363 159278474 -7371822 + MT2A LTR ERVL 326 465 -68 8 1800 23 0 0 0 chrX 159278523 159278546 -7371750 + AT_rich Low_complexity Low_complexity 1 23 0 8 1800 1027 30 0 8 chrX 159278546 159278679 -7371617 - B1_Mus1 SINE Alu 0 148 17 8 1800 429 160 80 88 chrX 159278582 159278719 -7371577 - MT2B LTR ERVL -337 264 129 8 1800 365 213 0 26 chrX 159278708 159278785 -7371511 - B3 SINE B2 -92 124 50 8 1800 852 126 0 0 chrX 159279071 159279214 -7371082 + URR1B DNA MER1_type 83 225 0 8 1800 316 336 0 18 chrX 159279286 159279398 -7370898 + RLTR19-int LTR ERVK 4376 4485 -1652 8 1800 2125 75 23 0 chrX 159280018 159280323 -7369973 - ORR1A2 LTR MaLR 0 327 16 8 1800 1238 61 0 0 chrX 159280350 159280498 -7369798 + B1_Mus1 SINE Alu 1 148 0 8 1800 2604 106 50 83 chrX 159280516 159280960 -7369336 + RLTR23 LTR ERV1 2 430 0 8 1800 504 326 14 7 chrX 159280984 159281123 -7369173 - RSINE1 SINE B4 0 165 26 8 1800 441 179 0 117 chrX 159281143 159281162 -7369134 + MT2B LTR ERVL 152 156 -445 8 1800 768 67 0 0 chrX 159281162 159281266 -7369030 + B1_Mus2 SINE Alu 2 105 -42 8 1800 1140 141 251 15 chrX 159281273 159281532 -7368764 + RMER19B LTR ERVK 544 863 -39 8 1800 1053 90 127 0 chrX 159281543 159281709 -7368587 + B2_Mm1a SINE B2 1 187 -6 8 1800 1118 62 21 0 chrX 159281754 159281898 -7368398 + B1_Mus2 SINE Alu 1 147 0 8 1800 207 88 0 0 chrX 159281898 159281932 -7368364 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 8 1800 393 22 0 0 chrX 159281954 159282000 -7368296 + (TG)n Simple_repeat Simple_repeat 1 46 0 8 1800 279 177 62 46 chrX 159282010 159282075 -7368221 - B4A SINE B4 -219 73 8 8 1800 348 148 0 0 chrX 159282075 159282136 -7368160 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 8 1800 766 30 0 0 chrX 159283227 159283327 -7366969 + B1_Mus2 SINE Alu 1 100 -47 8 1800 939 68 8 0 chrX 159283474 159283607 -7366689 + B1_Mus1 SINE Alu 15 148 0 8 1800 300 333 65 0 chrX 159283636 159283744 -7366552 + MTC LTR MaLR 48 162 -259 8 1800 276 224 0 0 chrX 159284761 159284828 -7365468 + MTC LTR MaLR 244 310 -97 8 1800 903 127 14 0 chrX 159284840 159284982 -7365314 - B1_Mur4 SINE Alu 0 150 7 8 1800 296 200 79 13 chrX 159285057 159285133 -7365163 + MTC LTR MaLR 326 411 -8 8 1800 629 179 127 18 chrX 159285134 159285299 -7364997 + MTD LTR MaLR 237 419 0 8 1800 697 283 30 5 chrX 159285321 159285520 -7364776 - ID_B1 SINE B4 -19 205 2 8 1800 1191 42 0 14 chrX 159285599 159285745 -7364551 - B1_Mus2 SINE Alu -3 144 1 8 1800 21 0 0 0 chrX 159285750 159285771 -7364525 + AT_rich Low_complexity Low_complexity 1 21 0 8 1800 1162 136 17 0 chrX 159285844 159286020 -7364276 - B2_Mm1t SINE B2 -14 179 1 8 1800 505 267 22 98 chrX 159286063 159286246 -7364050 - B3A SINE B2 -8 190 22 8 1800 241 163 0 0 chrX 159286278 159286321 -7363975 - B1F SINE Alu -86 63 21 8 1800 379 296 88 0 chrX 159286285 159286410 -7363886 - ID_B1 SINE B4 -87 137 2 8 1800 522 164 136 24 chrX 159286458 159286583 -7363713 + B1_Mur4 SINE Alu 12 150 0 8 1800 539 112 224 0 chrX 159286588 159286686 -7363610 + PB1D9 SINE Alu 1 120 0 8 1800 250 229 25 13 chrX 159286893 159286983 -7363313 + PB1D9 SINE Alu 39 120 -7 8 1800 883 79 151 0 chrX 159287058 159287184 -7363112 + B1_Mur4 SINE Alu 1 145 -5 8 1800 433 100 0 14 chrX 159287223 159287294 -7363002 + B2_Mm2 SINE B2 1 70 -125 8 1800 1177 68 0 0 chrX 159287526 159287672 -7362624 - B1_Mus2 SINE Alu 0 147 2 8 1800 648 85 0 0 chrX 159287691 159287785 -7362511 + B2_Mm2 SINE B2 58 151 -44 8 1800 691 212 11 96 chrX 159287794 159287982 -7362314 + B3A SINE B2 24 195 -3 8 1800 305 82 0 0 chrX 159287999 159288048 -7362248 + B1_Mur4 SINE Alu 102 150 0 8 1800 328 213 13 39 chrX 159288090 159288168 -7362128 - U6 snRNA snRNA -1 106 31 8 1800 1103 82 0 45 chrX 159288168 159288322 -7361974 - B1_Mus1 SINE Alu 0 148 2 8 1800 1136 95 0 0 chrX 159288340 159288488 -7361808 - B1_Mus1 SINE Alu 0 148 1 8 1800 1091 88 76 0 chrX 159288520 159288691 -7361605 - B2_Mm1a SINE B2 -9 184 1 8 1800 401 246 104 7 chrX 159288709 159288844 -7361452 - B1F1 SINE Alu 0 149 2 8 1800 352 235 49 0 chrX 159288993 159289074 -7361222 - B1_Mur2 SINE Alu -3 146 62 8 1800 525 255 28 7 chrX 159289131 159289273 -7361023 + ID_B1 SINE B4 80 224 0 8 1800 1369 96 11 0 chrX 159289279 159289467 -7360829 + B2_Mm1t SINE B2 2 191 -2 8 1800 490 233 34 17 chrX 159289505 159289623 -7360673 - B1F SINE Alu -29 120 1 8 1800 282 243 26 26 chrX 159289561 159289637 -7360659 - B4A SINE B4 -147 145 70 8 1800 252 309 31 16 chrX 159289698 159289826 -7360470 - L1M5 LINE L1 -443 5797 5668 8 1800 1196 70 76 0 chrX 159290029 159290200 -7360096 - B2_Mm1t SINE B2 -8 185 2 8 1800 225 0 0 0 chrX 159290200 159290225 -7360071 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1800 1328 92 22 0 chrX 159290234 159290418 -7359878 - B2_Mm1t SINE B2 -4 189 2 8 1800 21 0 0 0 chrX 159290428 159290449 -7359847 + AT_rich Low_complexity Low_complexity 1 21 0 8 1800 396 286 173 0 chrX 159290471 159290604 -7359692 - RSINE1 SINE B4 -7 158 3 8 1800 1576 48 0 0 chrX 159290879 159291065 -7359231 - B2_Mm1a SINE B2 -6 187 2 8 1800 711 287 19 24 chrX 159291111 159291318 -7358978 - B4 SINE B4 -7 285 80 8 1800 895 167 14 0 chrX 159291344 159291488 -7358808 - B1_Mur1 SINE Alu -3 146 1 8 1800 183 80 0 0 chrX 159291497 159291522 -7358774 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 8 1800 243 167 0 40 chrX 159291522 159291572 -7358724 - B4 SINE B4 -206 86 39 8 1800 482 153 44 18 chrX 159291652 159291765 -7358531 - B1_Mur2 SINE Alu -5 144 29 8 1800 838 231 103 0 chrX 159291787 159291982 -7358314 - ID_B1 SINE B4 -9 215 1 9 1800 2105 129 96 3 chrX 159292057 159292390 -7357906 - ORR1B2 LTR MaLR -3 364 1 9 1800 904 229 28 0 chrX 159292478 159292657 -7357639 + B3 SINE B2 9 192 -24 9 1800 1060 83 0 40 chrX 159292783 159292933 -7357363 + B1_Mm SINE Alu 2 145 -2 9 1800 1055 95 0 39 chrX 159292981 159293134 -7357162 - B1_Mm SINE Alu 0 147 1 9 1800 1035 122 0 0 chrX 159293476 159293624 -7356672 - B1_Mus1 SINE Alu 0 148 1 9 1800 1511 39 17 6 chrX 159293624 159293803 -7356493 - B2_Mm2 SINE B2 -13 182 1 9 1800 192 152 0 0 chrX 159293851 159293884 -7356412 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1800 459 268 79 14 chrX 159293885 159294025 -7356271 - RSINE1 SINE B4 -2 163 15 9 1800 287 273 88 26 chrX 159294096 159294108 -7356188 - B1F SINE Alu 0 149 30 9 1800 374 287 40 0 chrX 159294108 159294209 -7356087 - ID_B1 SINE B4 -9 215 111 9 1800 974 67 88 15 chrX 159294229 159294366 -7355930 + B1_Mus1 SINE Alu 1 147 -1 9 1800 368 122 17 2 chrX 159296027 159296099 -7354197 + B2_Mm2 SINE B2 1 73 -120 9 1800 451 302 0 60 chrX 159296125 159296259 -7354037 - RSINE1 SINE B4 -37 128 3 9 1800 497 269 37 18 chrX 159296259 159296422 -7353874 - ID_B1 SINE B4 -4 220 55 9 1800 295 275 45 27 chrX 159296513 159296625 -7353671 + PB1D7 SINE Alu 7 120 0 9 1800 405 276 152 16 chrX 159296729 159296854 -7353442 - B1F1 SINE Alu -1 148 7 9 1800 1289 97 5 16 chrX 159296894 159297082 -7353214 - B2_Mm1a SINE B2 -7 186 1 9 1800 235 286 48 0 chrX 159297082 159297145 -7353151 - PB1D10 SINE Alu -11 106 41 9 1800 448 80 32 54 chrX 159297933 159298026 -7352270 + L1Md_F2 LINE L1 6492 6582 0 9 1800 492 227 9 18 chrX 159298153 159298265 -7352031 - PB1D9 SINE Alu -8 112 2 9 1800 1430 80 16 0 chrX 159298292 159298479 -7351817 + B2_Mm2 SINE B2 1 190 -5 9 1800 949 93 58 0 chrX 159298486 159298625 -7351671 + B1_Mm SINE Alu 1 147 0 9 1800 208 102 20 20 chrX 159298625 159298675 -7351621 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 9 1800 718 221 18 24 chrX 159298871 159299038 -7351258 - B3A SINE B2 -9 189 24 9 1800 1171 41 0 40 chrX 159299076 159299228 -7351068 - B1_Mus2 SINE Alu 0 147 2 9 1800 267 169 0 4 chrX 159299307 159299360 -7350936 - ID4 SINE ID -99 53 2 9 1800 392 301 0 9 chrX 159299389 159299503 -7350793 + PB1D9 SINE Alu 1 113 -7 9 1800 273 280 39 26 chrX 159299746 159299823 -7350473 + ID4_ SINE ID 3 80 -3 9 1800 22 35 0 0 chrX 159299823 159299852 -7350444 + AT_rich Low_complexity Low_complexity 1 29 0 9 1800 861 176 0 0 chrX 159299852 159300000 -7350296 - B1_Mur1 SINE Alu -1 148 1 9 1800 1736 21 0 0 chrX 159300010 159300203 -7350093 - B2_Mm1a SINE B2 0 193 1 9 1800 615 212 160 77 chrX 159300203 159300361 -7349935 - B3 SINE B2 -14 181 9 9 1800 430 238 65 19 chrX 159300559 159300666 -7349630 + PB1D10 SINE Alu 3 114 -3 9 1800 231 36 0 0 chrX 159300720 159300748 -7349548 + (CTA)n Simple_repeat Simple_repeat 1 28 0 9 1800 1146 208 14 0 chrX 159301472 159301679 -7348617 - B3 SINE B2 -5 211 2 9 1800 241 287 158 0 chrX 159301725 159301826 -7348470 - RSINE1 SINE B4 -45 120 4 9 1800 396 0 0 0 chrX 159301851 159301895 -7348401 + (CA)n Simple_repeat Simple_repeat 1 44 0 9 1800 424 314 41 127 chrX 159302109 159302423 -7347873 - B4A SINE B4 -4 288 2 9 1800 234 308 64 46 chrX 159302430 159302539 -7347757 - PB1D10 SINE Alu -6 111 1 9 1800 231 300 17 0 chrX 159302647 159302707 -7347589 - ID4_ SINE ID -13 70 10 9 1800 202 225 0 0 chrX 159302769 159302809 -7347487 - MER5B DNA MER1_type 0 178 139 9 1800 295 313 0 0 chrX 159303144 159303227 -7347069 + L1MC4 LINE L1 6796 6878 -1164 9 1800 704 214 69 0 chrX 159303227 159303358 -7346938 + B1_Mur1 SINE Alu 1 140 -9 9 1800 501 233 68 8 chrX 159303537 159303654 -7346642 + RSINE1 SINE B4 3 126 -39 9 1800 529 246 197 39 chrX 159303687 159303865 -7346431 + ID_B1 SINE B4 8 213 -11 9 1800 399 21 0 0 chrX 159303865 159303913 -7346383 + (CA)n Simple_repeat Simple_repeat 2 49 0 9 1800 351 274 121 0 chrX 159303972 159304096 -7346200 - B1F SINE Alu -9 140 2 9 1800 704 260 20 0 chrX 159304121 159304267 -7346029 - B3A SINE B2 -47 151 3 9 1800 186 133 0 0 chrX 159304383 159304413 -7345883 + (TAA)n Simple_repeat Simple_repeat 1 30 0 9 1800 180 0 0 0 chrX 159304413 159304433 -7345863 + (TTA)n Simple_repeat Simple_repeat 3 22 0 9 1800 271 228 0 0 chrX 159304438 159304495 -7345801 - B1_Mur1 SINE Alu -9 140 84 9 1800 326 216 40 0 chrX 159304516 159304590 -7345706 + L1MC4 LINE L1 7300 7376 -666 9 1800 1069 58 0 21 chrX 159304862 159305003 -7345293 + B1_Mus1 SINE Alu 2 139 -9 9 1800 369 0 0 0 chrX 159305003 159305044 -7345252 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 9 1800 311 263 5 204 chrX 159305058 159305254 -7345042 + ID_B1 SINE B4 16 172 -52 9 1800 404 90 45 0 chrX 159305202 159305269 -7345027 + PB1D10 SINE Alu 40 109 -8 9 1800 457 217 192 0 chrX 159305302 159305422 -7344874 + B3A SINE B2 1 143 -55 9 1800 1177 41 0 33 chrX 159305629 159305780 -7344516 + B1_Mus2 SINE Alu 2 147 0 9 1800 534 313 16 48 chrX 159305910 159306098 -7344198 + ID_B1 SINE B4 26 207 -17 9 1800 349 277 0 27 chrX 159306864 159306965 -7343331 - B1F SINE Alu -21 127 33 9 1800 332 299 11 0 chrX 159307060 159307147 -7343149 - RSINE1 SINE B4 -72 93 6 9 1800 1187 167 10 24 chrX 159307171 159307380 -7342916 - B3 SINE B2 -8 208 3 9 1800 1157 82 0 0 chrX 159307388 159307535 -7342761 - B1_Mus2 SINE Alu 0 147 1 9 1800 216 0 0 0 chrX 159307586 159307610 -7342686 + (CA)n Simple_repeat Simple_repeat 2 25 0 9 1800 217 208 62 0 chrX 159307648 159307696 -7342600 - PB1D10 SINE Alu -66 51 1 9 1800 756 67 10 0 chrX 159307852 159307956 -7342340 - B1_Mus2 SINE Alu 0 147 43 9 1800 326 103 12 150 chrX 159307900 159307980 -7342316 - RLTR25B LTR ERVK -530 498 430 9 1800 352 279 0 111 chrX 159308014 159308167 -7342129 + B1F2 SINE Alu 2 137 -12 9 1800 458 238 20 0 chrX 159308169 159308270 -7342026 + ID_B1 SINE B4 90 192 -32 9 1800 189 0 0 0 chrX 159308927 159308948 -7341348 + (CAGGC)n Simple_repeat Simple_repeat 1 21 0 9 1800 520 293 0 0 chrX 159309301 159309417 -7340879 - PB1D7 SINE Alu 0 120 5 9 1800 355 242 52 21 chrX 159309428 159309525 -7340771 - PB1D10 SINE Alu -5 112 13 9 1800 246 289 84 0 chrX 159309453 159309536 -7340760 - ID_B1 SINE B4 -55 169 80 9 1800 392 283 65 7 chrX 159309610 159309749 -7340547 + B1F SINE Alu 3 149 0 9 1800 333 0 0 0 chrX 159310004 159310041 -7340255 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 9 1800 571 223 15 8 chrX 159310914 159311045 -7339251 + ID_B1 SINE B4 93 224 0 9 1800 391 250 0 0 chrX 159311050 159311122 -7339174 + RSINE1 SINE B4 5 76 -89 9 1800 763 227 92 5 chrX 159311144 159311339 -7338957 + B3 SINE B2 2 213 -3 9 1800 1284 27 0 0 chrX 159311349 159311496 -7338800 + B1_Mus1 SINE Alu 2 148 0 9 1800 302 302 111 30 chrX 159311603 159311702 -7338594 + ID_B1 SINE B4 84 190 -34 9 1800 258 300 150 26 chrX 159311702 159311716 -7338580 + B1F SINE Alu 3 129 -20 9 1800 1682 199 102 2 chrX 159311816 159312210 -7338086 + MT2A LTR ERVL 2 434 -99 9 1800 1149 62 0 20 chrX 159312263 159312412 -7337884 - B1_Mus2 SINE Alu -1 146 1 9 1800 764 75 393 7 chrX 159312419 159312554 -7337742 - B2_Mm2 SINE B2 -7 188 2 9 1800 1310 80 17 11 chrX 159312694 159312871 -7337425 - B2_Mm2 SINE B2 -14 181 4 9 1800 1473 43 0 46 chrX 159312903 159313097 -7337199 + B2_Mm1t SINE B2 2 186 -7 9 1800 1027 218 15 5 chrX 159313120 159313323 -7336973 - B3 SINE B2 -10 206 2 9 1800 419 240 83 0 chrX 159313584 159313680 -7336616 + B1F1 SINE Alu 1 104 -45 9 1800 29 0 0 0 chrX 159313736 159313765 -7336531 + AT_rich Low_complexity Low_complexity 1 29 0 9 1800 291 292 22 22 chrX 159313807 159313898 -7336398 - RSINE1 SINE B4 -21 144 54 9 1800 250 45 22 22 chrX 159313915 159313960 -7336336 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 9 1800 1305 90 34 0 chrX 159314152 159314330 -7335966 - B2_Mm1a SINE B2 -8 185 2 9 1800 1112 56 0 7 chrX 159314492 159314636 -7335660 + B1_Mur4 SINE Alu 2 144 -6 9 1800 234 0 0 0 chrX 159314640 159314666 -7335630 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 9 1800 935 227 10 15 chrX 159314675 159314881 -7335415 + B3 SINE B2 6 210 -6 9 1800 361 298 29 0 chrX 159315262 159315366 -7334930 - PB1D7 SINE Alu 0 120 14 9 1800 1197 42 7 0 chrX 159315392 159315536 -7334760 - B1_Mus1 SINE Alu -1 147 3 9 1800 286 360 0 0 chrX 159315686 159315786 -7334510 + RMER15 LTR ERVL 371 470 -105 9 1800 588 195 104 45 chrX 159315843 159315977 -7334319 + B1_Mur2 SINE Alu 6 147 -2 9 1800 430 262 98 15 chrX 159315993 159316125 -7334171 + B1F SINE Alu 1 143 -6 9 1800 719 252 0 13 chrX 159316365 159316518 -7333778 + B3 SINE B2 1 151 -65 1 1800 298 264 232 42 chrX 159316754 159316849 -7333447 + RSINE1 SINE B4 53 165 0 1 1800 234 208 57 0 chrX 159316914 159316967 -7333329 + L1MC4 LINE L1 7466 7521 -521 1 1800 456 215 28 0 chrX 159317005 159317112 -7333184 + ID_B1 SINE B4 111 220 -4 1 1800 1321 130 13 0 chrX 159317121 159317352 -7332944 - ORR1A4 LTR MaLR 0 329 96 1 1800 1669 74 36 66 chrX 159317378 159317512 -7332784 - RLTR31B_Mm LTR ERVK -264 293 164 1 1800 1175 74 0 0 chrX 159317512 159317660 -7332636 - B1_Mus1 SINE Alu 0 148 1 1 1800 1669 74 36 66 chrX 159317660 159317827 -7332469 - RLTR31B_Mm LTR ERVK -394 163 1 1 1800 1928 93 27 83 chrX 159317830 159318108 -7332188 + ORR1A2 LTR MaLR 1 285 -42 1 1800 1138 83 0 0 chrX 159318108 159318252 -7332044 + B1_Mm SINE Alu 2 145 -2 1 1800 1928 93 27 83 chrX 159318252 159318311 -7331985 + ORR1A2 LTR MaLR 286 319 -8 1 1800 715 68 0 0 chrX 159318315 159318418 -7331878 - ORR1A4 LTR MaLR -226 103 1 1 1800 442 261 18 9 chrX 159318596 159318708 -7331588 + PB1D7 SINE Alu 3 115 -5 1 1800 394 269 44 119 chrX 159318708 159318763 -7331533 + B1_Mur1 SINE Alu 2 58 -91 1 1800 2413 88 160 0 chrX 159318763 159319126 -7331170 + BGLII LTR ERVK 1 421 0 1 1800 394 269 44 119 chrX 159319126 159319230 -7331066 + B1_Mur1 SINE Alu 59 149 0 1 1800 607 226 34 20 chrX 159319270 159319419 -7330877 + B3 SINE B2 1 151 -65 1 1800 350 226 11 67 chrX 159319419 159319509 -7330787 + B3A SINE B2 36 120 -78 1 1800 389 267 34 17 chrX 159319785 159319903 -7330393 - PB1D7 SINE Alu 0 120 1 1 1800 801 221 0 7 chrX 159319999 159320149 -7330147 - B1_Mur2 SINE Alu 0 149 1 1 1800 397 248 39 67 chrX 159320203 159320307 -7329989 - PB1D7 SINE Alu -18 102 2 1 1800 257 288 0 0 chrX 159320325 159320391 -7329905 - tRNA-Ala-GCA tRNA tRNA -7 68 3 1 1800 191 209 47 0 chrX 159320435 159320478 -7329818 + MIRm SINE MIR 220 264 -12 1 1800 245 196 0 0 chrX 159320498 159320544 -7329752 + ID4 SINE ID 34 79 -4 1 1800 242 150 0 0 chrX 159320747 159320787 -7329509 + Lx8 LINE L1 7434 7473 0 1 1800 245 327 0 46 chrX 159321113 159321222 -7329074 - MER2 DNA MER2_type -40 305 202 1 1800 772 178 36 22 chrX 159321339 159321477 -7328819 + B1_Mus1 SINE Alu 1 140 -8 1 1800 439 279 54 48 chrX 159321541 159321688 -7328608 + B1_Mur1 SINE Alu 2 149 0 1 1800 237 224 20 0 chrX 159321697 159321746 -7328550 + RSINE1 SINE B4 8 57 -108 1 1800 5356 145 138 11 chrX 159321798 159322984 -7327312 - ORR1A3-int LTR MaLR -622 1341 5 1 1800 1818 139 16 3 chrX 159322986 159323296 -7327000 - ORR1A3 LTR MaLR -8 318 5 1 1800 284 217 151 11 chrX 159323502 159323595 -7326701 + ID_B1 SINE B4 118 223 -1 1 1800 241 311 89 163 chrX 159323972 159324095 -7326201 + ID_B1 SINE B4 36 149 -75 1 1800 325 252 108 8 chrX 159324095 159324215 -7326081 - B1F SINE Alu 0 149 18 1 1800 501 160 179 0 chrX 159324242 159324348 -7325948 - B1_Mus1 SINE Alu -22 126 2 1 1800 246 227 0 70 chrX 159324287 159324358 -7325938 - B4 SINE B4 -146 146 81 1 1800 258 288 57 10 chrX 159324354 159324451 -7325845 - B1F1 SINE Alu -21 99 1 1 1800 296 229 257 0 chrX 159324813 159324922 -7325374 + ID_B1 SINE B4 88 224 0 1 1800 299 138 263 11 chrX 159324828 159324923 -7325373 + B1F SINE Alu 31 149 0 1 1800 389 242 88 0 chrX 159325349 159325440 -7324856 + ID_B1 SINE B4 121 219 -5 1 1800 1105 57 14 0 chrX 159325478 159325618 -7324678 - B1_Mus2 SINE Alu -5 142 1 1 1800 283 192 0 60 chrX 159326459 159326642 -7323654 + C-rich Low_complexity Low_complexity 1 172 0 1 1800 194 0 39 0 chrX 159326729 159326755 -7323541 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1800 1237 41 0 0 chrX 159326764 159326911 -7323385 - B1_Mus2 SINE Alu 0 147 1 1 1800 211 239 67 53 chrX 159327069 159327144 -7323152 + B1F SINE Alu 66 141 -8 1 1800 274 162 0 75 chrX 159327154 159327194 -7323102 + A-rich Low_complexity Low_complexity 1 35 0 1 1800 987 80 73 0 chrX 159327194 159327331 -7322965 + B1_Mm SINE Alu 1 147 0 1 1800 274 162 0 75 chrX 159327331 159327370 -7322926 + A-rich Low_complexity Low_complexity 36 74 0 1 1800 561 273 59 29 chrX 159327428 159327564 -7322732 + RSINE1 SINE B4 3 142 -23 1 1800 534 232 27 0 chrX 159327704 159327816 -7322480 + PB1D10 SINE Alu 2 116 -1 1 1800 1131 83 0 0 chrX 159327986 159328144 -7322152 + B2_Mm2 SINE B2 2 160 -33 1 1800 243 0 0 0 chrX 159328144 159328171 -7322125 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 1 1800 1032 136 33 0 chrX 159328171 159328196 -7322100 + B2_Mm1t SINE B2 161 190 -3 1 1800 551 195 124 0 chrX 159328229 159328342 -7321954 + B1_Mur2 SINE Alu 1 127 -22 1 1800 219 360 11 0 chrX 159328417 159328506 -7321790 - ID_B1 SINE B4 -129 95 6 1 1800 1564 28 28 0 chrX 159328572 159328753 -7321543 + B2_Mm1a SINE B2 2 187 -6 1 1800 1109 69 28 0 chrX 159328922 159329066 -7321230 - B1_Mus1 SINE Alu 0 148 1 1 1800 407 224 93 18 chrX 159329071 159329253 -7321043 - L1MB3 LINE L1 -49 6134 5928 1 1800 783 169 0 30 chrX 159329416 159329550 -7320746 - B1_Mur4 SINE Alu -13 137 8 1 1800 642 194 27 34 chrX 159329558 159329707 -7320589 - L1MB3 LINE L1 -291 5892 5745 1 1800 669 217 29 0 chrX 159329740 159329878 -7320418 + B1_Mur2 SINE Alu 8 149 0 1 1800 180 111 0 0 chrX 159329973 159330000 -7320296 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1 1800 895 193 0 0 chrX 159330000 159330150 -7320146 - B1_Mur4 SINE Alu 0 150 1 1 1800 32 26 0 0 chrX 159330152 159330191 -7320105 + AT_rich Low_complexity Low_complexity 1 39 0 1 1800 270 136 0 0 chrX 159330206 159330250 -7320046 + (T)n Simple_repeat Simple_repeat 1 44 0 1 1800 1176 55 0 7 chrX 159330253 159330400 -7319896 - B1_Mus2 SINE Alu 0 147 2 1 1800 240 250 29 68 chrX 159330555 159330658 -7319638 + ID_B1 SINE B4 125 223 -1 1 1800 216 0 0 0 chrX 159330689 159330713 -7319583 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1800 8564 37 1 3 chrX 159330786 159332384 -7317912 - L1Md_F2 LINE L1 0 6582 4990 1 1800 1709 31 0 0 chrX 159332403 159332596 -7317700 - B2_Mm1a SINE B2 0 193 1 1 1800 409 167 0 0 chrX 159333322 159333388 -7316908 + B3 SINE B2 1 66 -150 1 1800 1161 53 34 29 chrX 159333386 159333561 -7316735 - B2_Mm1a SINE B2 -8 185 10 1 1800 534 201 180 0 chrX 159333567 159333706 -7316590 + B3 SINE B2 53 216 0 1 1800 943 149 0 7 chrX 159333821 159333970 -7316326 - B1_Mur2 SINE Alu -1 148 1 1 1800 23 33 0 0 chrX 159333970 159334000 -7316296 + AT_rich Low_complexity Low_complexity 1 30 0 1 1800 266 238 0 0 chrX 159334257 159334320 -7315976 - L1MB8 LINE L1 -2 6176 6114 1 1800 560 276 108 27 chrX 159334383 159334569 -7315727 - B3 SINE B2 -6 210 10 1 1800 2705 123 4 57 chrX 159334640 159335132 -7315164 - RLTR28 LTR ERVL -58 466 1 1 1800 486 0 0 0 chrX 159335147 159335201 -7315095 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1800 412 290 38 76 chrX 159335207 159335364 -7314932 + RSINE1 SINE B4 12 162 -3 1 1800 23 54 0 0 chrX 159335364 159335401 -7314895 + AT_rich Low_complexity Low_complexity 1 37 0 1 1800 307 187 36 0 chrX 159335676 159335756 -7314540 - L1MB4 LINE L1 -2 6181 6094 1 1800 1066 88 0 20 chrX 159335796 159335946 -7314350 - B1_Mus1 SINE Alu -1 147 1 1 1800 25 31 0 0 chrX 159335946 159335978 -7314318 + AT_rich Low_complexity Low_complexity 1 32 0 1 1800 371 293 0 10 chrX 159335998 159336098 -7314198 - RSINE1 SINE B4 -26 139 41 1 1800 721 157 14 43 chrX 159336228 159336368 -7313928 - B1_Mur3 SINE Alu -12 137 2 1 1800 189 0 0 0 chrX 159336519 159336540 -7313756 + (TGG)n Simple_repeat Simple_repeat 3 23 0 1 1800 333 109 0 0 chrX 159336555 159336610 -7313686 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1800 655 237 15 0 chrX 159336627 159336762 -7313534 - B3A SINE B2 -48 150 14 1 1800 408 282 45 15 chrX 159336845 159336978 -7313318 + RSINE1 SINE B4 8 144 -21 1 1800 3256 186 113 21 chrX 159337334 159338041 -7312255 - Lx9 LINE L1 -704 6940 6169 1 1800 227 211 175 0 chrX 159338036 159338093 -7312203 - Lx6 LINE L1 -1727 5733 5667 1 1800 482 233 19 0 chrX 159338098 159338201 -7312095 - B3 SINE B2 -5 211 107 1 1800 267 265 0 0 chrX 159338192 159338260 -7312036 - B4 SINE B4 -141 151 84 1 1800 339 193 35 24 chrX 159338617 159338702 -7311594 + B1_Mus1 SINE Alu 36 121 -27 1 1800 606 268 49 44 chrX 159338724 159338927 -7311369 - ID_B1 SINE B4 -19 205 2 1 1800 333 0 0 0 chrX 159338945 159338982 -7311314 + (TAAAA)n Simple_repeat Simple_repeat 3 39 0 1 1800 229 135 39 0 chrX 159339442 159339494 -7310802 + GA-rich Low_complexity Low_complexity 2 55 0 1 1800 284 45 0 43 chrX 159340805 159340852 -7309444 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 1 1800 592 231 0 0 chrX 159340868 159340985 -7309311 - B1_Mur1 SINE Alu -6 143 27 1 1800 431 238 151 0 chrX 159341007 159341133 -7309163 - B1F SINE Alu 0 149 5 1 1800 454 269 68 47 chrX 159341670 159341861 -7308435 - B3A SINE B2 -3 195 1 1 1800 225 214 0 0 chrX 159341882 159341924 -7308372 - L1M3 LINE L1 -510 5658 5617 1 1800 643 270 16 101 chrX 159342168 159342186 -7308110 - B4A SINE B4 -1 291 274 1 1800 252 0 0 0 chrX 159342186 159342214 -7308082 + (GA)n Simple_repeat Simple_repeat 1 28 0 1 1800 643 270 16 101 chrX 159342214 159342512 -7307784 - B4A SINE B4 -19 273 2 1 1800 469 272 34 7 chrX 159342516 159342649 -7307647 - B1F SINE Alu -18 132 2 1 1800 431 198 51 117 chrX 159342697 159342834 -7307462 + ID_B1 SINE B4 79 206 -18 1 1800 237 220 0 0 chrX 159342849 159342899 -7307397 + ID_B1 SINE B4 173 222 -2 1 1800 697 280 99 25 chrX 159342945 159343187 -7307109 + B4A SINE B4 22 281 -11 1 1800 222 37 0 0 chrX 159343232 159343259 -7307037 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1800 522 302 27 7 chrX 159343315 159343465 -7306831 - RSINE1 SINE B4 -10 155 3 1 1800 307 220 10 71 chrX 159343505 159343603 -7306693 - L1ME3A LINE L1 -37 6136 6045 1 1800 297 250 57 57 chrX 159343618 159343724 -7306572 + RSINE1 SINE B4 15 120 -45 1 1800 269 26 26 0 chrX 159344071 159344109 -7306187 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1800 34 0 0 0 chrX 159344127 159344161 -7306135 + AT_rich Low_complexity Low_complexity 1 34 0 1 1800 254 169 15 0 chrX 159344255 159344320 -7305976 + (TA)n Simple_repeat Simple_repeat 1 66 0 1 1800 541 192 0 14 chrX 159344320 159344434 -7305862 - B1_Mur1 SINE Alu -10 139 3 1 1800 808 214 92 0 chrX 159344442 159344638 -7305658 - B3 SINE B2 0 216 3 1 1800 354 270 59 14 chrX 159344652 159344771 -7305525 - B1F2 SINE Alu -5 122 1 1 1800 1224 98 10 62 chrX 159344952 159345147 -7305149 - B2_Mm1t SINE B2 -7 186 2 1 1800 495 0 0 0 chrX 159345551 159345606 -7304690 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 1800 224 122 0 24 chrX 159346395 159346437 -7303859 + (TCC)n Simple_repeat Simple_repeat 2 42 0 1 1800 1006 59 67 0 chrX 159346453 159346588 -7303708 - B1_Mus1 SINE Alu -3 145 2 1 1800 459 0 0 0 chrX 159346984 159347035 -7303261 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1800 653 236 0 0 chrX 159347221 159347365 -7302931 - B3A SINE B2 -16 182 39 1 1800 831 110 179 13 chrX 159347370 159347526 -7302770 - B2_Mm2 SINE B2 -12 183 2 1 1800 431 222 0 0 chrX 159347654 159347735 -7302561 - ID4_ SINE ID 0 83 3 1 1800 609 247 20 0 chrX 159347739 159347885 -7302411 - B1F SINE Alu 0 149 1 1 1800 1034 70 0 0 chrX 159348147 159348289 -7302007 - B2_Mm2 SINE B2 -53 142 1 1 1800 847 269 14 14 chrX 159348380 159348599 -7301697 - ID_B1 SINE B4 0 224 6 1 1800 582 137 19 10 chrX 159348626 159348729 -7301567 - B1_Mur1 SINE Alu 0 149 46 1 1800 1065 236 130 9 chrX 159348720 159349036 -7301260 - ORR1D2 LTR MaLR -16 354 1 1 1800 264 204 0 20 chrX 159349036 159349086 -7301210 - B1_Mus2 SINE Alu -97 50 2 1 1800 217 188 21 0 chrX 159349092 159349140 -7301156 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 1 1800 1275 126 5 5 chrX 159349147 159349338 -7300958 - B2_Mm2 SINE B2 -3 192 2 1 1800 631 179 26 91 chrX 159349343 159349497 -7300799 - B1_Mur4 SINE Alu 0 150 7 1 1800 342 305 9 9 chrX 159349497 159349603 -7300693 - B1F SINE Alu -13 136 31 1 1800 232 291 116 95 chrX 159349635 159349662 -7300634 - B3A SINE B2 0 198 5 1 1800 781 239 6 25 chrX 159349662 159349825 -7300471 - RSINE1 SINE B4 0 165 6 1 1800 484 271 42 0 chrX 159349869 159349987 -7300309 + ID_B1 SINE B4 101 223 -1 1 1800 677 256 34 44 chrX 159349993 159350197 -7300099 + B3 SINE B2 1 202 -14 1 1800 423 252 0 36 chrX 159350262 159350373 -7299923 + B1_Mur1 SINE Alu 43 149 0 1 1800 745 241 25 59 chrX 159350668 159350871 -7299425 - B3A SINE B2 0 198 3 1 1800 793 262 59 5 chrX 159351534 159351737 -7298559 - ID_B1 SINE B4 -2 222 9 1 1800 228 185 0 0 chrX 159352011 159352065 -7298231 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1800 534 245 56 99 chrX 159352073 159352376 -7297920 - B4 SINE B4 -2 290 1 1 1800 516 250 117 7 chrX 159352396 159352533 -7297763 - ID_B1 SINE B4 -24 200 49 1 1800 277 212 43 96 chrX 159352643 159352737 -7297559 + MT2B LTR ERVL 152 240 -361 1 1800 647 160 0 0 chrX 159352657 159352763 -7297533 + B1_Mur1 SINE Alu 6 111 -38 1 1800 233 79 70 113 chrX 159352760 159352831 -7297465 + B2_Mm2 SINE B2 114 181 -14 1 1800 2593 80 0 0 chrX 159353038 159353365 -7296931 - ORR1A2 LTR MaLR 0 327 1 1 1800 24 0 0 0 chrX 159353380 159353404 -7296892 + AT_rich Low_complexity Low_complexity 1 24 0 1 1800 576 226 21 35 chrX 159353412 159353554 -7296742 - B1F SINE Alu -1 148 9 1 1800 255 267 78 0 chrX 159353571 159353661 -7296635 - Tigger7 DNA MER2_type -124 2367 2271 1 1800 383 177 11 92 chrX 159354045 159354132 -7296164 + ID4 SINE ID 2 81 -2 1 1800 522 208 117 51 chrX 159354187 159354324 -7295972 - B1_Mur1 SINE Alu -1 148 3 1 1800 911 258 83 79 chrX 159354363 159354641 -7295655 - B4A SINE B4 0 292 14 1 1800 404 309 50 29 chrX 159354650 159354790 -7295506 - B1F1 SINE Alu -1 148 6 1 1800 267 227 0 0 chrX 159354834 159354900 -7295396 + CT-rich Low_complexity Low_complexity 4 69 0 1 1800 343 222 127 8 chrX 159355068 159355084 -7295212 - B1_Mur2 SINE Alu 0 149 18 1 1800 504 168 39 10 chrX 159355084 159355186 -7295110 - ID_B1 SINE B4 -21 203 99 1 1800 455 177 13 0 chrX 159355202 159355281 -7295015 + ID_B1 SINE B4 143 222 -2 1 1800 224 305 92 37 chrX 159355289 159355342 -7294954 - PB1D9 SINE Alu -5 115 54 1 1800 342 0 0 0 chrX 159355342 159355380 -7294916 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 1 1800 1117 67 0 0 chrX 159355380 159355515 -7294781 - B1_Mus2 SINE Alu -12 135 1 1 1800 224 305 92 37 chrX 159355515 159355569 -7294727 - PB1D9 SINE Alu -67 53 2 1 1800 282 116 0 0 chrX 159356151 159356194 -7294102 + (TATG)n Simple_repeat Simple_repeat 4 46 0 1 1800 648 203 97 8 chrX 159356212 159356346 -7293950 - RSINE1 SINE B4 -17 148 3 1 1800 1973 157 46 28 chrX 159356392 159356514 -7293782 - RLTR33 LTR ERVK 0 678 563 1 1800 3227 33 13 10 chrX 159356514 159356909 -7293387 + MTA_Mm LTR MaLR 1 396 0 1 1800 1987 112 34 15 chrX 159356909 159357410 -7292886 - RLTR33 LTR ERVK -116 562 3 1 1800 1323 102 5 11 chrX 159357478 159357667 -7292629 + B2_Mm1t SINE B2 1 188 -5 1 1800 1060 96 14 0 chrX 159357823 159357969 -7292327 - B1_Mus1 SINE Alu 0 148 1 1 1800 22 0 0 0 chrX 159357979 159358001 -7292295 + AT_rich Low_complexity Low_complexity 1 22 0 1 1800 737 209 73 19 chrX 159358001 159358206 -7292090 - B3 SINE B2 0 216 1 1 1800 464 167 78 0 chrX 159358210 159358312 -7291984 - B1F SINE Alu -1 148 39 1 1800 328 241 35 0 chrX 159358369 159358456 -7291840 - PB1D10 SINE Alu -27 90 1 1 1800 843 164 13 27 chrX 159358618 159358768 -7291528 + B1_Mur3 SINE Alu 2 149 0 1 1800 276 233 50 0 chrX 159358814 159358874 -7291422 + B1F SINE Alu 69 131 -18 1 1800 588 225 42 7 chrX 159358898 159359041 -7291255 + B1_Mur1 SINE Alu 1 148 -1 1 1800 712 158 0 0 chrX 159359734 159359861 -7290435 + B1_Mur3 SINE Alu 23 149 0 1 1800 524 258 0 44 chrX 159360453 159360611 -7289685 - RSINE1 SINE B4 0 165 15 1 1800 237 231 58 0 chrX 159360610 159360662 -7289634 - PB1D10 SINE Alu -15 102 48 1 1800 525 191 0 0 chrX 159361237 159361347 -7288949 + CT-rich Low_complexity Low_complexity 4 113 0 1 1800 519 258 101 30 chrX 159361556 159361724 -7288572 - B3A SINE B2 -18 180 1 1 1800 536 210 0 0 chrX 159361751 159361851 -7288445 - ID_B1 SINE B4 -4 220 121 1 1800 697 278 11 16 chrX 159361939 159362122 -7288174 - B3 SINE B2 -2 214 33 1 1800 359 225 0 12 chrX 159362158 159362239 -7288057 - PB1D10 SINE Alu 0 117 38 1 1800 25 0 0 0 chrX 159362280 159362305 -7287991 + AT_rich Low_complexity Low_complexity 1 25 0 1 1800 220 300 0 32 chrX 159362319 159362381 -7287915 - ID_B1 SINE B4 -80 144 85 1 1800 443 274 0 17 chrX 159362960 159363079 -7287217 - ID_B1 SINE B4 -3 221 105 1 1800 215 240 20 0 chrX 159363154 159363204 -7287092 - RSINE1 SINE B4 -90 75 25 1 1800 921 156 0 0 chrX 159363210 159363483 -7286813 + (CA)n Simple_repeat Simple_repeat 1 273 0 1 1800 369 321 9 0 chrX 159363499 159363605 -7286691 - ID_B1 SINE B4 -44 180 74 1 1800 251 304 129 11 chrX 159363605 159363698 -7286598 - MER21B LTR ERV1 -155 708 605 1 1800 528 294 6 52 chrX 159363961 159364133 -7286163 - RSINE1 SINE B4 0 165 2 1 1800 348 277 170 0 chrX 159364146 159364258 -7286038 - ID_B1 SINE B4 -8 216 86 1 1800 364 234 104 21 chrX 159364304 159364400 -7285896 - PB1D9 SINE Alu -16 104 1 1 1800 232 307 0 33 chrX 159364410 159364501 -7285795 - B3 SINE B2 -6 210 123 1 1800 348 43 0 0 chrX 159364474 159364520 -7285776 - B1_Mus1 SINE Alu -102 46 1 1 1800 505 269 19 51 chrX 159364520 159364622 -7285674 - MTE2a LTR MaLR -198 181 79 1 1800 756 224 7 7 chrX 159364622 159364770 -7285526 + B1_Mur1 SINE Alu 1 148 -1 1 1800 505 290 22 61 chrX 159364770 159364847 -7285449 - MTE2a LTR MaLR -298 81 11 1 1800 320 111 19 0 chrX 159364884 159364938 -7285358 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 1800 297 292 30 50 chrX 159364956 159365057 -7285239 - PB1D10 SINE Alu -5 112 14 1 1800 27 0 0 0 chrX 159365079 159365106 -7285190 + AT_rich Low_complexity Low_complexity 1 27 0 1 1800 681 125 39 15 chrX 159365118 159365248 -7285048 - Lx3B LINE L1 0 6973 6841 1 1800 225 0 0 0 chrX 159365512 159365537 -7284759 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1800 284 304 13 0 chrX 159365994 159366073 -7284223 - BC1_Mm scRNA scRNA -70 82 3 1 1800 1321 63 15 41 chrX 159366236 159366433 -7283863 - B2_Mm1t SINE B2 0 193 2 1 1800 297 216 100 22 chrX 159366435 159366525 -7283771 - PB1D10 SINE Alu -18 99 3 1 1800 21 36 0 0 chrX 159366558 159366586 -7283710 + AT_rich Low_complexity Low_complexity 1 28 0 1 1800 221 0 35 0 chrX 159366701 159366730 -7283566 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 1800 693 215 22 0 chrX 159366730 159366865 -7283431 - B1_Mus2 SINE Alu -9 138 1 1 1800 341 262 126 0 chrX 159366883 159366986 -7283310 - PB1D7 SINE Alu 0 120 5 1 1800 306 246 0 0 chrX 159367865 159367926 -7282370 - ID4_ SINE ID -3 80 20 1 1800 23 33 0 0 chrX 159368110 159368140 -7282156 + AT_rich Low_complexity Low_complexity 1 30 0 1 1800 447 227 9 18 chrX 159368140 159368252 -7282044 - B1_Mur1 SINE Alu -6 143 33 1 1800 629 249 65 65 chrX 159368267 159368482 -7281814 - ID_B1 SINE B4 -1 223 9 1 1800 501 260 6 88 chrX 159369206 159369366 -7280930 - B4A SINE B4 -144 148 2 1 1800 615 213 125 54 chrX 159369727 159369911 -7280385 - B3A SINE B2 0 198 2 1 1800 306 259 12 0 chrX 159369963 159370044 -7280252 + ID4_ SINE ID 2 83 0 1 1800 1488 171 128 6 chrX 159370059 159370394 -7279902 - ORR1C2 LTR MaLR -8 376 1 1 1800 382 215 13 0 chrX 159370394 159370473 -7279823 + ID4_ SINE ID 4 83 0 1 1800 423 264 85 68 chrX 159370537 159370624 -7279672 - MER68 LTR ERVL -45 518 427 1 1800 2939 49 0 0 chrX 159370624 159370970 -7279326 - ORR1A0 LTR MaLR 0 346 1 1 1800 423 264 85 68 chrX 159370970 159371130 -7279166 - MER68 LTR ERVL -137 426 267 1 1800 242 254 0 16 chrX 159371134 159371198 -7279098 + CT-rich Low_complexity Low_complexity 2 64 0 1 1800 216 246 279 0 chrX 159371201 159371262 -7279034 - ID4_ SINE ID -4 79 2 1 1800 222 282 0 53 chrX 159371272 159371347 -7278949 - PB1 SINE Alu -2 125 55 1 1800 387 223 232 0 chrX 159371423 159371535 -7278761 - B1F SINE Alu -10 139 2 1 1800 828 181 0 42 chrX 159371569 159371713 -7278583 + B1_Mur3 SINE Alu 1 138 -11 1 1800 279 0 0 0 chrX 159371714 159371745 -7278551 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1 1800 1373 72 39 0 chrX 159371969 159372149 -7278147 - B2_Mm1t SINE B2 -5 188 2 1 1800 776 245 71 0 chrX 159372615 159372811 -7277485 - ID_B1 SINE B4 -13 211 2 1 1800 1316 103 27 11 chrX 159372890 159373076 -7277220 - B2_Mm2 SINE B2 -5 190 2 1 1800 1049 92 14 0 chrX 159373131 159373273 -7277023 - B1_Mus1 SINE Alu -2 146 3 1 1800 595 272 7 0 chrX 159373454 159373590 -7276706 + ID_B1 SINE B4 82 218 -6 1 1800 22 35 0 0 chrX 159373711 159373740 -7276556 + AT_rich Low_complexity Low_complexity 1 29 0 1 1800 427 296 17 0 chrX 159373745 159373860 -7276436 - PB1D10 SINE Alu 0 117 1 1 1800 654 236 20 13 chrX 159374297 159374447 -7275849 + RSINE1 SINE B4 3 153 -12 1 1800 414 39 0 0 chrX 159374461 159374513 -7275783 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1800 369 0 0 0 chrX 159374513 159374553 -7275743 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 1800 347 286 10 20 chrX 159374980 159375080 -7275216 + MER58A DNA MER1_type 17 115 -109 1 1800 225 130 174 0 chrX 159375275 159375321 -7274975 + B1_Mus2 SINE Alu 1 54 -93 1 1800 621 147 11 53 chrX 159375321 159375508 -7274788 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 1 1800 232 243 14 28 chrX 159375510 159375582 -7274714 + RLTR25B LTR ERVK 427 497 -531 1 1800 668 122 19 0 chrX 159375524 159375631 -7274665 + B1_Mur4 SINE Alu 41 149 -1 1 1800 327 289 0 0 chrX 159375683 159375759 -7274537 - ID4 SINE ID -6 77 2 1 1800 1236 48 0 0 chrX 159375849 159375996 -7274300 + B1_Mus2 SINE Alu 1 147 0 1 1800 288 351 11 0 chrX 159376054 159376148 -7274148 - PB1 SINE Alu -19 108 14 1 1800 672 119 18 0 chrX 159376346 159376455 -7273841 + B1_Mus2 SINE Alu 7 117 -30 1 1800 405 194 51 85 chrX 159376350 159376468 -7273828 + MT2B LTR ERVL 175 288 -313 1 1800 37 0 0 0 chrX 159376489 159376526 -7273770 + AT_rich Low_complexity Low_complexity 1 37 0 1 1800 779 234 75 100 chrX 159376652 159376932 -7273364 + B4A SINE B4 3 275 -17 1 1800 1210 224 43 109 chrX 159377004 159377400 -7272896 - ORR1D1 LTR MaLR -4 370 1 1 1800 366 271 89 8 chrX 159377403 159377526 -7272770 - B1F SINE Alu -3 146 14 1 1800 793 242 73 10 chrX 159377419 159377611 -7272685 - ID_B1 SINE B4 -20 204 1 1 1800 909 239 16 0 chrX 159377824 159378012 -7272284 - B3 SINE B2 -25 191 1 1 1800 940 155 0 33 chrX 159378125 159378278 -7272018 - B1_Mur4 SINE Alu -1 149 2 1 1800 343 286 48 56 chrX 159378330 159378358 -7271938 - B1F1 SINE Alu -10 139 15 1 1800 477 265 0 0 chrX 159378358 159378456 -7271840 - ID_B1 SINE B4 -31 193 96 1 1800 837 207 57 42 chrX 159378741 159378953 -7271343 - B3 SINE B2 0 216 2 1 1800 242 300 42 53 chrX 159379428 159379523 -7270773 - L2a LINE L2 -42 3384 3291 1 1800 932 52 0 42 chrX 159379875 159380017 -7270279 + B2_Mm1a SINE B2 55 190 -3 1 1800 787 251 29 0 chrX 159380342 159380513 -7269783 + B3A SINE B2 1 176 -22 1 1800 575 228 41 0 chrX 159380528 159380651 -7269645 - B1F2 SINE Alu 0 149 22 1 1800 291 54 0 0 chrX 159381091 159381128 -7269168 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1800 289 283 20 98 chrX 159381131 159381196 -7269100 - RSINE1 SINE B4 -69 96 34 1 1800 1053 102 0 33 chrX 159381196 159381348 -7268948 - B1_Mus1 SINE Alu 0 148 2 1 1800 289 283 20 98 chrX 159381348 159381384 -7268912 - RSINE1 SINE B4 -132 33 3 1 1800 342 297 26 10 chrX 159381384 159381522 -7268774 - PB1D7 SINE Alu -2 147 8 1 1800 676 256 45 13 chrX 159381592 159381746 -7268550 - RSINE1 SINE B4 -6 159 1 1 1800 539 286 53 219 chrX 159381767 159381884 -7268412 - L1MB7 LINE L1 -38 6140 6026 1 1800 783 272 13 58 chrX 159381884 159382110 -7268186 + ID_B1 SINE B4 3 218 -6 1 1800 539 261 74 32 chrX 159382110 159382287 -7268009 - L1MB7 LINE L1 -147 6037 5866 1 1800 996 117 0 0 chrX 159382287 159382424 -7267872 - B1_Mus1 SINE Alu -11 137 1 1 1800 523 288 51 122 chrX 159382424 159382480 -7267816 - L1MB7 LINE L1 -313 5865 5814 1 1800 832 44 0 0 chrX 159382480 159382593 -7267703 - L1Md_A LINE L1 0 6582 6470 1 1800 2113 269 32 50 chrX 159382623 159383476 -7266820 + L1_Rod LINE L1 3798 4634 -1213 1 3 7561 76 33 77 chrX 159383539 159384775 -7265521 - L1VL2 LINE L1 -3762 2381 1093 1 1801 723 78 188 44 chrX 159384775 159384935 -7265361 - B2_Mm1t SINE B2 -5 188 6 1 1801 7561 76 33 77 chrX 159384935 159385608 -7264688 - L1VL2 LINE L1 -3762 1092 389 1 1801 1304 269 30 73 chrX 159385609 159386186 -7264110 - L1MB8 LINE L1 -349 5829 5278 1 1801 28 0 0 0 chrX 159386193 159386221 -7264075 + AT_rich Low_complexity Low_complexity 1 28 0 1 1801 246 294 54 89 chrX 159386236 159386348 -7263948 - MER20 DNA MER1_type -111 108 1 1 1801 723 144 117 36 chrX 159386395 159386532 -7263764 + B1_Mur2 SINE Alu 2 149 0 1 1801 511 286 90 7 chrX 159386659 159386814 -7263482 - ID_B1 SINE B4 -54 170 3 1 1801 414 0 0 0 chrX 159386835 159386881 -7263415 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1801 288 351 106 28 chrX 159386919 159387098 -7263198 - ORR1D2 LTR MaLR -138 232 40 1 1801 490 271 51 19 chrX 159387132 159387290 -7263006 - RSINE1 SINE B4 0 165 3 1 1801 1162 182 33 5 chrX 159387318 159387528 -7262768 + B3 SINE B2 1 216 0 1 1801 23 0 0 0 chrX 159387530 159387553 -7262743 + AT_rich Low_complexity Low_complexity 1 23 0 1 1801 342 98 0 0 chrX 159388151 159388202 -7262094 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1801 2001 152 3 3 chrX 159389511 159389822 -7260474 - RLTR10E LTR ERVK 0 311 1 1 1801 198 0 0 0 chrX 159389976 159389998 -7260298 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1801 269 258 126 21 chrX 159390054 159390149 -7260147 + B1F SINE Alu 45 149 0 1 1801 463 308 37 8 chrX 159390183 159390317 -7259979 + RSINE1 SINE B4 11 148 -17 1 1801 396 0 0 0 chrX 159390320 159390364 -7259932 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1801 479 286 108 28 chrX 159390496 159390672 -7259624 + B3A SINE B2 1 190 -8 1 1801 1065 220 0 0 chrX 159390734 159390943 -7259353 - B3 SINE B2 -7 209 1 1 1801 258 256 198 0 chrX 159391372 159391458 -7258838 + PB1 SINE Alu 22 124 -3 1 1801 366 141 173 100 chrX 159391596 159391706 -7258590 + MTEb LTR MaLR 262 379 0 1 1801 384 176 16 2 chrX 159392143 159392236 -7258060 - L1MA9 LINE L1 -3 6288 6203 1 1801 1193 68 0 0 chrX 159392288 159392434 -7257862 + B1_Mus2 SINE Alu 2 147 0 1 1801 22 0 0 0 chrX 159392434 159392456 -7257840 + AT_rich Low_complexity Low_complexity 1 22 0 1 1801 567 227 0 8 chrX 159392482 159392602 -7257694 - ID_B1 SINE B4 -2 222 104 1 1801 306 0 0 0 chrX 159392627 159392661 -7257635 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1801 295 193 161 46 chrX 159392662 159392749 -7257547 + B4A SINE B4 134 230 -62 1 1801 377 174 14 0 chrX 159392873 159392942 -7257354 + B4 SINE B4 217 286 -6 1 1801 273 306 112 0 chrX 159393232 159393330 -7256966 - PB1D7 SINE Alu -7 113 5 1 1801 780 129 0 0 chrX 159393507 159393631 -7256665 + (TCCC)n Simple_repeat Simple_repeat 1 124 0 1 1801 312 279 0 37 chrX 159393635 159393717 -7256579 - ID2 SINE ID 0 83 5 1 1801 535 331 0 13 chrX 159393903 159394059 -7256237 - RSINE1 SINE B4 -10 155 2 1 1801 285 229 111 30 chrX 159394178 159394224 -7256072 - MTD LTR MaLR -314 107 57 1 1801 4425 60 0 0 chrX 159394224 159394759 -7255537 - L1_Mus1 LINE L1 0 6567 6033 1 1801 321 101 2 1 chrX 159394759 159394811 -7255485 - MTD LTR MaLR -365 56 1 1 1801 521 175 21 0 chrX 159394938 159395035 -7255261 - B1_Mur3 SINE Alu -2 147 49 1 1801 549 44 0 0 chrX 159395071 159395139 -7255157 + (TC)n Simple_repeat Simple_repeat 1 68 0 1 1801 180 77 0 0 chrX 159395147 159395173 -7255123 + (TCTCTG)n Simple_repeat Simple_repeat 4 29 0 1 1801 1079 92 0 0 chrX 159395175 159395317 -7254979 - B1_Mus1 SINE Alu -5 143 2 1 1801 562 226 0 31 chrX 159395330 159395458 -7254838 - ID_B1 SINE B4 0 224 101 1 1801 210 71 0 0 chrX 159395495 159395523 -7254773 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 1 1801 259 232 84 12 chrX 159395976 159396059 -7254237 - B4A SINE B4 -202 90 2 1 1801 314 238 71 121 chrX 159396137 159396319 -7253977 - MTEa LTR MaLR 0 379 207 1 1801 207 0 0 0 chrX 159396351 159396374 -7253922 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1 1801 376 267 67 0 chrX 159396374 159396464 -7253832 - PB1D10 SINE Alu -12 105 10 1 1801 183 42 0 0 chrX 159396601 159396625 -7253671 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 1801 234 0 0 0 chrX 159396698 159396724 -7253572 + (TCTA)n Simple_repeat Simple_repeat 4 29 0 1 1801 306 0 0 0 chrX 159396801 159396835 -7253461 + (TCTA)n Simple_repeat Simple_repeat 4 37 0 1 1801 386 138 62 0 chrX 159397076 159397141 -7253155 - B4 SINE B4 -106 186 118 1 1801 788 207 73 21 chrX 159397225 159397417 -7252879 - B3 SINE B2 -5 211 10 1 1801 1013 52 0 0 chrX 159397417 159397551 -7252745 - L1Md_T LINE L1 0 6582 6449 1 1801 236 30 30 0 chrX 159397589 159397622 -7252674 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1801 732 224 40 0 chrX 159397635 159397787 -7252509 - B3A SINE B2 -38 160 3 1 1801 663 254 21 14 chrX 159397789 159397933 -7252363 - B1_Mur1 SINE Alu -1 148 4 1 1801 501 292 23 127 chrX 159397933 159398009 -7252287 - ID_B1 SINE B4 -1 223 27 1 1801 1039 173 85 10 chrX 159398091 159398124 -7252172 - B3 SINE B2 -2 214 178 1 1801 309 26 0 0 chrX 159398124 159398162 -7252134 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1801 276 30 0 0 chrX 159398162 159398194 -7252102 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 1801 1039 173 85 10 chrX 159398194 159398358 -7251938 - B3 SINE B2 -39 177 2 1 1801 270 0 0 0 chrX 159398959 159398989 -7251307 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1801 567 258 113 5 chrX 159399045 159399240 -7251056 + B3 SINE B2 1 216 0 1 1801 469 234 38 61 chrX 159399270 159399402 -7250894 - ID_B1 SINE B4 -3 221 93 1 1801 268 284 27 0 chrX 159399338 159399412 -7250884 - PB1D10 SINE Alu -40 77 2 1 1801 28 29 0 0 chrX 159399412 159399447 -7250849 + AT_rich Low_complexity Low_complexity 1 35 0 1 1801 408 273 14 50 chrX 159399640 159399779 -7250517 + RSINE1 SINE B4 7 140 -25 1 1801 596 248 21 21 chrX 159400382 159400526 -7249770 - B1_Mur1 SINE Alu 0 149 6 1 1801 546 287 52 6 chrX 159400572 159400744 -7249552 - B3A SINE B2 -18 180 1 1 1801 679 234 29 7 chrX 159400862 159401000 -7249296 + B1F SINE Alu 1 141 -8 1 1801 27 29 0 0 chrX 159401034 159401068 -7249228 + AT_rich Low_complexity Low_complexity 1 34 0 1 1801 639 214 20 20 chrX 159401079 159401227 -7249069 - B3 SINE B2 -11 205 58 1 1801 1763 106 87 21 chrX 159401404 159401692 -7248604 + Lx4A LINE L1 6750 7056 -2 1 1801 378 0 0 0 chrX 159401747 159401789 -7248507 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1801 253 283 0 0 chrX 159401812 159401872 -7248424 + ID4_ SINE ID 2 61 -22 1 1801 211 231 0 0 chrX 159402371 159402423 -7247873 + ID SINE ID 32 83 -141 1 1801 604 198 333 0 chrX 159402895 159403057 -7247239 + B3 SINE B2 1 216 0 1 1801 208 354 0 12 chrX 159403257 159403340 -7246956 + CT-rich Low_complexity Low_complexity 4 85 0 1 1801 468 257 44 0 chrX 159403340 159403453 -7246843 - B1_Mur1 SINE Alu -31 118 1 1 1801 468 304 111 43 chrX 159404049 159404283 -7246013 - B4A SINE B4 -4 288 39 1 1801 385 246 8 102 chrX 159404313 159404355 -7245941 - PB1D10 SINE Alu -1 116 6 1 1801 439 222 0 0 chrX 159404355 159404436 -7245860 - ID_B1 SINE B4 -57 167 87 1 1801 1164 187 5 9 chrX 159405790 159406001 -7244295 + ID_B1 SINE B4 8 217 -7 1 1801 423 314 205 10 chrX 159406503 159406646 -7243650 - MLT1D LTR MaLR -1 504 316 1 1801 441 0 0 0 chrX 159406646 159406695 -7243601 + (TTTTA)n Simple_repeat Simple_repeat 5 53 0 1 1801 423 314 205 10 chrX 159406695 159406853 -7243443 - MLT1D LTR MaLR -190 315 145 1 1801 349 315 18 9 chrX 159406956 159407068 -7243228 - MLT1D LTR MaLR -376 129 17 1 1801 387 0 0 0 chrX 159407157 159407200 -7243096 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1801 216 254 18 0 chrX 159407670 159407725 -7242571 + ID4_ SINE ID 2 57 -26 1 1801 766 228 6 6 chrX 159407758 159407917 -7242379 + RSINE1 SINE B4 3 161 -4 1 1801 24 53 0 0 chrX 159408249 159408287 -7242009 + AT_rich Low_complexity Low_complexity 1 38 0 1 1801 480 186 440 7 chrX 159408626 159408776 -7241520 - ID_B1 SINE B4 0 224 10 1 1801 254 179 18 0 chrX 159409061 159409117 -7241179 + CT-rich Low_complexity Low_complexity 2 58 0 1 1801 1021 93 14 28 chrX 159409120 159409264 -7241032 - B1_Mus1 SINE Alu -6 142 1 1 1801 643 118 124 16 chrX 159409365 159409494 -7240802 + B1_Mus1 SINE Alu 6 148 0 1 1801 291 54 0 0 chrX 159409522 159409559 -7240737 + (CAAAC)n Simple_repeat Simple_repeat 2 38 0 1 1801 516 59 0 0 chrX 159410037 159410105 -7240191 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 1 1801 1118 217 5 0 chrX 159410259 159410471 -7239825 - B3 SINE B2 0 216 4 1 1801 423 0 0 0 chrX 159411130 159411177 -7239119 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1801 583 202 105 0 chrX 159411280 159411404 -7238892 + B1_Mur2 SINE Alu 2 138 -11 1 1801 252 86 0 0 chrX 159411616 159411651 -7238645 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 1 1801 467 291 116 52 chrX 159412029 159412297 -7237999 - B4A SINE B4 -3 289 5 1 1801 820 239 38 28 chrX 159412339 159412550 -7237746 - ID_B1 SINE B4 -2 222 10 1 1801 273 181 12 35 chrX 159412587 159412673 -7237623 + CT-rich Low_complexity Low_complexity 3 86 0 1 1801 715 235 58 16 chrX 159412689 159412879 -7237417 - ID_B1 SINE B4 -26 198 1 1 1801 212 0 36 0 chrX 159413524 159413552 -7236744 + (TTTTTG)n Simple_repeat Simple_repeat 1 29 0 1 1801 726 214 32 63 chrX 159413779 159413969 -7236327 - B3A SINE B2 0 198 15 1 1801 240 174 14 42 chrX 159414451 159414523 -7235773 + A-rich Low_complexity Low_complexity 6 75 0 1 1801 285 100 0 0 chrX 159414534 159414584 -7235712 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 1 1801 198 0 0 0 chrX 159414824 159414846 -7235450 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 1801 192 77 0 0 chrX 159414846 159414871 -7235425 + (CG)n Simple_repeat Simple_repeat 2 27 0 1 1801 379 225 142 37 chrX 159414879 159415013 -7235283 - RSINE1 SINE B4 -17 148 1 1 1801 817 281 54 88 chrX 159415052 159415462 -7234834 - L1MB7 LINE L1 -16 6168 5773 1 1801 641 185 249 0 chrX 159415547 159415720 -7234576 - ID_B1 SINE B4 -4 220 5 1 1801 772 210 43 0 chrX 159416120 159416258 -7234038 + B1_Mur3 SINE Alu 1 144 -5 1 1801 239 146 18 0 chrX 159416310 159416365 -7233931 + CT-rich Low_complexity Low_complexity 2 57 0 1 1801 3250 11 3 5 chrX 159416564 159416932 -7233364 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1801 57055 21 15 1 chrX 159416932 159423321 -7226975 - IAPEz-int LTR ERVK 0 6481 8 1 1801 3250 11 3 5 chrX 159423321 159423689 -7226607 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1801 186 71 0 0 chrX 159423805 159423833 -7226463 + (GTTTG)n Simple_repeat Simple_repeat 4 31 0 1 1801 486 265 29 29 chrX 159423847 159423983 -7226313 + ID_B1 SINE B4 2 137 -87 1 1801 824 154 46 0 chrX 159423983 159424113 -7226183 + B1_Mur3 SINE Alu 5 140 -9 1 1801 336 324 21 45 chrX 159424419 159424697 -7225599 - Lx9 LINE L1 -1 7472 7205 1 1801 420 20 0 0 chrX 159424702 159424751 -7225545 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1801 318 164 0 18 chrX 159424764 159424820 -7225476 - B1F SINE Alu -8 141 87 1 1801 280 212 57 57 chrX 159424820 159424834 -7225462 - ID_B1 SINE B4 -8 216 147 1 1801 387 263 10 10 chrX 159424923 159425019 -7225277 - PB1 SINE Alu -28 99 4 1 1801 225 319 98 27 chrX 159425061 159425245 -7225051 - L1M5 LINE L1 -352 5772 5576 1 1801 557 282 45 28 chrX 159425555 159425734 -7224562 + B3A SINE B2 1 182 -16 1 1801 335 284 43 52 chrX 159426167 159426282 -7224014 - PB1 SINE Alu -2 125 12 1 1801 258 222 33 120 chrX 159426354 159426446 -7223850 - B1F2 SINE Alu -65 84 1 1 1801 425 291 20 47 chrX 159426446 159426532 -7223764 - B4A SINE B4 -210 82 1 1 1801 787 199 12 58 chrX 159426755 159426926 -7223370 + RSINE1 SINE B4 3 165 0 1 1801 740 227 42 12 chrX 159427414 159427612 -7222684 - B3 SINE B2 0 195 9 1 1801 1201 241 7 52 chrX 159427647 159427953 -7222343 + B4A SINE B4 1 292 0 1 1801 738 127 40 0 chrX 159428115 159428241 -7222055 + B1_Mus2 SINE Alu 17 147 0 1 1801 195 100 0 0 chrX 159428243 159428273 -7222023 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 1 1801 808 199 0 14 chrX 159429279 159429422 -7220874 + B1_Mur1 SINE Alu 3 143 -6 1 1801 684 300 4 30 chrX 159429465 159429695 -7220601 + ID_B1 SINE B4 1 224 0 1 1801 283 330 28 0 chrX 159429720 159429826 -7220470 + PB1D9 SINE Alu 11 119 -1 1 1801 248 219 96 0 chrX 159430037 159430110 -7220186 + ID4_ SINE ID 1 80 -3 1 1801 938 204 9 46 chrX 159430204 159430420 -7219876 + B3 SINE B2 4 211 -5 1 1801 274 283 87 0 chrX 159430689 159430781 -7219515 - ID_B1 SINE B4 -34 190 91 1 1801 461 190 0 10 chrX 159431045 159431146 -7219150 + GA-rich Low_complexity Low_complexity 2 101 0 1 1801 281 180 0 0 chrX 159431184 159431234 -7219062 + B4 SINE B4 2 51 -241 1 1801 770 224 194 0 chrX 159431380 159431612 -7218684 - Lx9 LINE L1 -178 7466 7190 1 1801 458 228 75 52 chrX 159431817 159431951 -7218345 + B1F SINE Alu 5 141 -8 1 1801 295 306 0 27 chrX 159431974 159432048 -7218248 + ID4 SINE ID 3 74 -9 1 1801 462 221 208 6 chrX 159432297 159432456 -7217840 - MIR SINE MIR -42 220 30 1 1801 339 273 17 50 chrX 159433521 159433702 -7216594 + (TATATG)n Simple_repeat Simple_repeat 6 180 0 1 1801 208 244 0 22 chrX 159433705 159433797 -7216499 + (TG)n Simple_repeat Simple_repeat 1 90 0 1 1801 389 303 33 88 chrX 159433909 159434090 -7216206 - B4A SINE B4 -120 172 2 1 1801 434 207 0 22 chrX 159434253 159434342 -7215954 + ID_B1 SINE B4 5 91 -133 1 1801 264 331 113 0 chrX 159434346 159434410 -7215886 + ID SINE ID 4 81 -143 1 1801 284 270 0 0 chrX 159434410 159434473 -7215823 + B1F SINE Alu 1 63 -86 1 1801 820 158 7 7 chrX 159435487 159435627 -7214669 - B1_Mur1 SINE Alu 0 149 10 1 1801 885 263 29 0 chrX 159435638 159435847 -7214449 - ID_B1 SINE B4 -8 216 2 1 1801 1389 150 155 44 chrX 159435968 159436271 -7214025 - ORR1C2 LTR MaLR -4 380 39 1 1801 3563 131 8 107 chrX 159436271 159436334 -7213962 - MT2B LTR ERVL -4 597 562 1 1801 1237 28 0 0 chrX 159436334 159436477 -7213819 - B1_Mm SINE Alu 0 147 5 1 1801 3563 131 8 107 chrX 159436477 159437074 -7213222 - MT2B LTR ERVL -40 561 3 1 1801 1389 150 155 44 chrX 159437074 159437112 -7213184 - ORR1C2 LTR MaLR -346 38 1 1 1801 584 266 145 26 chrX 159437192 159437385 -7212911 + B4A SINE B4 1 216 -76 1 1801 784 246 36 55 chrX 159437446 159437665 -7212631 - MTEa LTR MaLR -164 215 1 1 1801 671 221 149 0 chrX 159438588 159438783 -7211513 + ID_B1 SINE B4 1 224 0 1 1801 441 224 8 49 chrX 159438829 159438951 -7211345 + B1F SINE Alu 1 117 -32 1 1801 489 34 0 0 chrX 159439161 159439220 -7211076 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1801 221 200 0 52 chrX 159439474 159439532 -7210764 + BC1_Mm scRNA scRNA 49 103 -49 1 1801 1229 237 158 11 chrX 159439538 159439900 -7210396 - MTD LTR MaLR -4 415 1 1 1801 1469 239 129 38 chrX 159439905 159440487 -7209809 - MTD-int LTR MaLR -4 1254 620 1 1801 1019 113 0 0 chrX 159440531 159440672 -7209624 + B1_Mus1 SINE Alu 2 142 -6 1 1801 372 77 0 0 chrX 159440676 159440728 -7209568 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1801 633 264 98 173 chrX 159440738 159440983 -7209313 - MTD LTR MaLR -19 402 210 1 1801 1273 40 0 0 chrX 159440983 159441131 -7209165 - B1_Mus1 SINE Alu 0 148 1 1 1801 633 261 96 182 chrX 159441131 159441338 -7208958 - MTD LTR MaLR -212 209 1 1 1801 281 252 73 65 chrX 159441361 159441484 -7208812 - MER34 LTR ERV1 -115 427 304 1 1801 521 245 14 28 chrX 159441605 159441748 -7208548 - ID_B1 SINE B4 0 224 84 1 1801 362 305 19 0 chrX 159441860 159441965 -7208331 + MER58B DNA MER1_type 233 339 -2 1 1801 1021 131 0 11 chrX 159442014 159442192 -7208104 + (TTC)n Simple_repeat Simple_repeat 2 177 0 1 1801 212 43 42 42 chrX 159442192 159442240 -7208056 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 1 1801 1220 61 0 22 chrX 159442243 159442426 -7207870 + (TTC)n Simple_repeat Simple_repeat 1 179 0 1 1801 306 73 0 0 chrX 159442426 159442467 -7207829 + (TCC)n Simple_repeat Simple_repeat 3 43 0 1 1801 910 93 85 0 chrX 159442469 159442598 -7207698 - B1_Mus2 SINE Alu -6 141 2 1 1801 394 301 54 66 chrX 159442736 159442903 -7207393 - MER20 DNA MER1_type 0 219 55 1 1801 550 346 53 11 chrX 159442932 159443119 -7207177 + ID_B1 SINE B4 23 217 -7 1 1801 209 167 29 43 chrX 159443119 159443188 -7207108 + (CAAAC)n Simple_repeat Simple_repeat 5 72 0 1 1801 632 244 8 0 chrX 159443560 159443687 -7206609 + B1F1 SINE Alu 3 130 -19 1 1801 768 224 0 0 chrX 159443710 159443853 -7206443 + B1_Mm SINE Alu 4 146 -1 1 1801 473 321 0 0 chrX 159444360 159444494 -7205802 - B1F SINE Alu -15 134 1 1 1801 190 0 32 32 chrX 159444538 159444569 -7205727 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 1 1801 605 148 16 65 chrX 159444569 159444684 -7205612 - B1_Mm SINE Alu -8 139 29 1 1801 27 0 0 0 chrX 159445520 159445547 -7204749 + AT_rich Low_complexity Low_complexity 1 27 0 1 1801 455 297 29 38 chrX 159445609 159445749 -7204547 - RSINE1 SINE B4 -20 145 1 1 1801 617 229 7 20 chrX 159445788 159445935 -7204361 - B1F2 SINE Alu -1 148 4 1 1801 816 272 47 15 chrX 159445938 159446305 -7203991 - MTD LTR MaLR -1 418 1 1 1801 538 257 22 0 chrX 159446320 159446456 -7203840 - ID_B1 SINE B4 0 224 86 1 1801 249 212 106 0 chrX 159446590 159446656 -7203640 + MER3 DNA MER1_type 6 78 -131 1 1801 198 0 0 0 chrX 159446674 159446696 -7203600 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 1801 189 0 0 0 chrX 159446696 159446716 -7203580 + (GA)n Simple_repeat Simple_repeat 1 21 0 1 1801 2352 122 58 65 chrX 159446764 159447228 -7203068 - RMER4A LTR ERVK 0 466 6 1 1801 332 268 36 12 chrX 159447288 159447371 -7202925 - B4A SINE B4 -206 86 2 1 1801 446 245 140 47 chrX 159447487 159447637 -7202659 - RSINE1 SINE B4 0 165 2 1 1801 738 229 56 30 chrX 159448119 159448317 -7201979 + B3 SINE B2 1 203 -13 1 1801 360 148 0 0 chrX 159448320 159448381 -7201915 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 1801 1030 232 14 5 chrX 159448479 159448700 -7201596 + ID_B1 SINE B4 1 223 -1 1 1801 441 223 3 30 chrX 159449589 159449691 -7200605 + PB1D10 SINE Alu 10 120 -29 1 1801 925 238 37 14 chrX 159449691 159449908 -7200388 - ID_B1 SINE B4 0 224 3 1 1801 384 269 76 8 chrX 159449908 159449936 -7200360 + B1F SINE Alu 121 149 0 1 1801 3716 44 26 0 chrX 159450295 159450747 -7199549 - L1_Mus1 LINE L1 -14 6553 6090 1 1801 1291 25 0 0 chrX 159451538 159451697 -7198599 + B2_Mm1a SINE B2 2 160 -33 1 1801 387 0 0 0 chrX 159451697 159451740 -7198556 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 1 1801 444 307 43 7 chrX 159452221 159452362 -7197934 + B1F1 SINE Alu 4 149 0 1 1801 687 208 176 48 chrX 159452378 159452559 -7197737 + ID_B1 SINE B4 5 211 -13 1 1801 204 40 0 0 chrX 159452559 159452584 -7197712 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 1 1801 21 36 0 0 chrX 159453156 159453184 -7197112 + AT_rich Low_complexity Low_complexity 1 28 0 1 1801 706 224 0 7 chrX 159453207 159453342 -7196954 + RSINE1 SINE B4 4 137 -28 1 1801 466 233 34 8 chrX 159453386 159453503 -7196793 + B1_Mur1 SINE Alu 24 143 -6 1 1801 213 175 0 0 chrX 159453506 159453546 -7196750 + GA-rich Low_complexity Low_complexity 3 42 0 1 1801 454 244 0 0 chrX 159453586 159453672 -7196624 + PB1D7 SINE Alu 4 89 -31 1 1801 273 331 75 40 chrX 159453723 159453896 -7196400 - MER77 LTR ERVL 0 607 429 1 1801 243 88 0 0 chrX 159453949 159453983 -7196313 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1801 531 202 52 9 chrX 159454022 159454137 -7196159 - MER68 LTR ERVL -297 266 147 1 1801 338 315 111 0 chrX 159455132 159455240 -7195056 - PB1D7 SINE Alu 0 120 1 1 1801 1109 69 14 0 chrX 159455360 159455504 -7194792 - B1_Mm SINE Alu -1 146 1 1 1801 233 218 0 35 chrX 159455857 159455914 -7194382 + RMER30 DNA MER1_type 110 164 -38 1 1801 1268 34 0 0 chrX 159456308 159456455 -7193841 - B1_Mus2 SINE Alu 0 147 1 1 1801 1207 55 7 0 chrX 159456484 159456630 -7193666 - B1_Mus1 SINE Alu 0 148 2 1 1801 222 37 0 0 chrX 159456633 159456660 -7193636 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1801 635 295 69 0 chrX 159457591 159457764 -7192532 - ID_B1 SINE B4 -17 207 23 1 1801 306 203 51 0 chrX 159457712 159457771 -7192525 - ID4_ SINE ID -10 73 12 1 1801 257 217 34 35 chrX 159457923 159458020 -7192276 + PB1D9 SINE Alu 41 142 -7 1 1801 202 205 0 0 chrX 159458192 159458231 -7192065 + (ATG)n Simple_repeat Simple_repeat 1 39 0 1 1801 3187 63 5 0 chrX 159458895 159459293 -7191003 - MTB LTR MaLR 0 400 1 1 1801 756 279 10 5 chrX 159460126 159460328 -7189968 + ID_B1 SINE B4 18 220 -4 1 1801 534 205 7 36 chrX 159461024 159461161 -7189135 - RSINE1 SINE B4 -31 134 2 1 1801 484 301 24 29 chrX 159461174 159461379 -7188917 + MER3 DNA MER1_type 1 204 -5 1 1801 281 318 45 9 chrX 159461470 159461581 -7188715 + PB1D10 SINE Alu 1 115 -2 1 1801 23 68 0 0 chrX 159462136 159462180 -7188116 + AT_rich Low_complexity Low_complexity 1 44 0 1 1801 548 236 0 8 chrX 159462343 159462467 -7187829 - B1F SINE Alu -8 141 19 1 1801 2752 105 27 90 chrX 159462647 159463171 -7187125 - RLTR24 LTR ERV1 -38 491 1 1 1801 233 297 65 21 chrX 159464223 159464316 -7185980 + PB1D10 SINE Alu 1 97 -20 1 1801 225 211 0 0 chrX 159464367 159464405 -7185891 - MurSatRep1 Unknown Unknown -1866 271 234 1 1801 334 254 0 0 chrX 159464462 159464529 -7185767 + ID4_ SINE ID 8 74 -9 1 1801 510 141 21 0 chrX 159464562 159464704 -7185592 + (TA)n Simple_repeat Simple_repeat 2 146 0 1 1801 720 138 0 40 chrX 159465238 159465389 -7184907 + CT-rich Low_complexity Low_complexity 2 146 0 1 1801 421 294 8 40 chrX 159465398 159465522 -7184774 - RSINE1 SINE B4 -44 121 2 1 1801 520 225 44 50 chrX 159465787 159465946 -7184350 - RLTR14 LTR ERV1 0 382 225 1 1801 272 303 23 69 chrX 159466165 159466296 -7184000 - MER34 LTR ERV1 -417 125 1 1 1801 255 261 161 74 chrX 159466762 159466911 -7183385 - RSINE1 SINE B4 -1 164 3 1 1801 306 0 0 0 chrX 159467194 159467228 -7183068 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 1801 459 228 20 10 chrX 159467232 159467334 -7182962 - PB1D7 SINE Alu -16 104 2 1 1801 311 258 0 0 chrX 159467822 159467884 -7182412 + RSINE1 SINE B4 81 142 -23 1 1801 966 221 49 29 chrX 159467960 159468165 -7182131 + B3 SINE B2 1 209 -7 1 1801 952 218 14 10 chrX 159468283 159468491 -7181805 + B3 SINE B2 1 209 -7 1 1801 290 264 14 0 chrX 159468766 159468838 -7181458 + ID4_ SINE ID 7 79 -4 1 1801 222 91 0 0 chrX 159469737 159469770 -7180526 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1 1801 440 313 8 0 chrX 159469889 159470020 -7180276 - B1F SINE Alu -1 148 17 1 1801 811 201 0 20 chrX 159470065 159470217 -7180079 - B1_Mur2 SINE Alu 0 149 1 1 1801 247 243 193 35 chrX 159470236 159470381 -7179915 - L1MB5 LINE L1 -32 6142 5975 1 1801 312 244 84 12 chrX 159470929 159471012 -7179284 - RLTR42-int LTR ERVK -119 5403 5315 1 1801 364 195 62 54 chrX 159471133 159471263 -7179033 - RLTR42-int LTR ERVK -625 4897 4767 1 1801 1668 177 122 26 chrX 159471272 159471649 -7178647 - MTC LTR MaLR -8 413 1 1 1801 2152 186 36 67 chrX 159471656 159472176 -7178120 - RLTR42-int LTR ERVK -766 4756 4253 1 1801 482 259 28 14 chrX 159472634 159472775 -7177521 - RLTR42-int LTR ERVK -3749 1773 1631 1 1801 474 234 159 0 chrX 159473116 159473261 -7177035 - RLTR42-int LTR ERVK -4191 1331 1164 1 1801 339 250 45 27 chrX 159474502 159474613 -7175683 - L1MB5 LINE L1 -187 5987 5875 1 1801 969 241 120 49 chrX 159474613 159474636 -7175660 - RMER5 LTR ERV1 -84 450 430 1 1801 1073 88 0 0 chrX 159474636 159474773 -7175523 + B1_Mus2 SINE Alu 1 137 -10 1 1801 195 42 0 0 chrX 159474773 159474797 -7175499 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1801 969 241 120 49 chrX 159474797 159475139 -7175157 - RMER5 LTR ERV1 -105 429 59 1 1801 1199 68 0 0 chrX 159475279 159475418 -7174878 + B1_Mus1 SINE Alu 1 139 -9 1 1801 218 56 28 0 chrX 159475418 159475454 -7174842 + (CAAAC)n Simple_repeat Simple_repeat 2 38 0 1 1801 2603 161 12 79 chrX 159475599 159475693 -7174603 - RLTR24 LTR ERV1 0 529 431 1 1801 2377 86 12 0 chrX 159475693 159476019 -7174277 - Lx2A1 LINE L1 -11 6997 6668 1 1801 2603 161 12 79 chrX 159476019 159476491 -7173805 - RLTR24 LTR ERV1 -99 430 1 1 1801 235 175 0 0 chrX 159476491 159476531 -7173765 - B3A SINE B2 -158 40 1 1 1801 390 21 0 0 chrX 159477008 159477055 -7173241 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1801 1798 185 75 25 chrX 159477126 159477525 -7172771 - MTD LTR MaLR 0 419 1 1 1801 1042 122 0 7 chrX 159478157 159478305 -7171991 + B1_Mus1 SINE Alu 2 148 0 1 1801 231 204 0 0 chrX 159478312 159478356 -7171940 + RSINE1 SINE B4 17 60 -105 1 1801 691 179 187 2 chrX 159478604 159478821 -7171475 - Lx3C LINE L1 -1 6980 6710 1 1801 583 102 164 18 chrX 159479022 159479132 -7171164 - B3A SINE B2 -72 126 1 1 1801 1231 46 0 0 chrX 159479240 159479391 -7170905 - L1_Mus1 LINE L1 -1 6566 6416 1 1801 271 258 90 14 chrX 159479520 159479660 -7170636 - MER34A1 LTR ERV1 -9 578 388 1 1801 225 0 0 0 chrX 159479910 159479935 -7170361 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 1801 427 219 37 19 chrX 159480641 159480748 -7169548 - PB1D9 SINE Alu 0 120 12 1 1801 212 264 195 55 chrX 159480748 159480767 -7169529 - B4 SINE B4 -65 225 82 1 1801 590 243 57 0 chrX 159480768 159480908 -7169388 - B1F SINE Alu -1 148 1 1 1801 255 273 169 11 chrX 159481479 159481568 -7168728 - PB1D10 SINE Alu -2 115 13 1 1801 350 240 27 0 chrX 159481688 159481763 -7168533 - ID4_ SINE ID -4 79 3 1 1801 1218 207 0 0 chrX 159481843 159482046 -7168250 + B3 SINE B2 1 203 -13 1 1801 551 221 0 9 chrX 159482079 159482193 -7168103 + ID_B1 SINE B4 100 212 -12 1 1801 367 161 16 0 chrX 159482490 159482552 -7167744 + ID4 SINE ID 2 64 -19 1 1801 281 270 54 178 chrX 159482643 159482828 -7167468 + MER58A DNA MER1_type 63 224 0 1 1801 1165 279 277 16 chrX 159482850 159483481 -7166815 - RMER1C Other Other -18 1324 529 1 1801 2278 107 27 0 chrX 159483712 159484049 -7166247 - Lx LINE L1 0 6654 6309 1 1801 1146 68 30 30 chrX 159484049 159484216 -7166080 - Lx2 LINE L1 -481 6516 6350 1 1801 2795 120 50 11 chrX 159484213 159484669 -7165627 + Lx2 LINE L1 5876 6349 -648 1 1801 438 20 0 0 chrX 159484861 159484912 -7165384 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1801 381 162 0 0 chrX 159485558 159485626 -7164670 + (TCTCTG)n Simple_repeat Simple_repeat 3 70 0 1 1801 359 293 84 38 chrX 159485626 159485913 -7164383 + RMER17C LTR ERVK 82 381 -29 1 1801 270 0 0 0 chrX 159486262 159486292 -7164004 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1801 633 234 39 13 chrX 159486293 159486449 -7163847 - B3A SINE B2 -38 160 1 1 1801 246 351 45 84 chrX 159486588 159486660 -7163636 - B3A SINE B2 -3 195 2 1 1801 618 248 15 8 chrX 159486660 159486790 -7163506 - RSINE1 SINE B4 -32 133 3 1 1801 450 317 68 28 chrX 159487089 159487339 -7162957 + B4A SINE B4 5 264 -28 1 1801 451 292 25 31 chrX 159487468 159487627 -7162669 - MER31A LTR ERV1 -76 409 252 1 1801 237 256 78 44 chrX 159487588 159487678 -7162618 + LTR48 LTR ERV1 64 156 -631 1 1801 189 0 0 0 chrX 159487678 159487699 -7162597 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 1801 787 199 70 32 chrX 159487772 159487959 -7162337 + B2_Mm2 SINE B2 1 194 -1 1 1801 311 291 11 73 chrX 159488380 159488558 -7161738 - L1MA4 LINE L1 -311 5992 5826 1 1801 306 0 0 0 chrX 159489316 159489350 -7160946 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1801 22 0 0 0 chrX 159489369 159489391 -7160905 + AT_rich Low_complexity Low_complexity 1 22 0 1 1801 2164 161 69 20 chrX 159489767 159489837 -7160459 - RLTR11A LTR ERVK 0 528 459 1 1801 459 0 0 0 chrX 159489837 159489888 -7160408 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1801 2164 161 69 20 chrX 159489888 159490267 -7160029 - RLTR11A LTR ERVK -70 458 57 1 1801 257 0 0 29 chrX 159490279 159490313 -7159983 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 1 1801 900 259 14 43 chrX 159490548 159490830 -7159466 - L1_Mur3 LINE L1 -89 5791 5518 1 1801 2266 135 0 0 chrX 159490891 159491218 -7159078 + ORR1A2 LTR MaLR 1 327 0 1 1801 707 235 7 13 chrX 159491248 159491399 -7158897 - RSINE1 SINE B4 -14 151 2 1 1801 245 288 12 12 chrX 159491403 159491484 -7158812 - MER31A LTR ERV1 -206 260 180 1 1801 1560 6 0 16 chrX 159491705 159491891 -7158405 - L1Md_T LINE L1 0 6582 6400 1 1801 1031 44 0 0 chrX 159491891 159492026 -7158270 + B1_Mm SINE Alu 13 147 0 1 1801 661 138 251 4 chrX 159492199 159492448 -7157848 - RMER5 LTR ERV1 -62 472 163 1 1801 210 184 57 75 chrX 159492473 159492526 -7157770 - B1F SINE Alu -53 96 45 1 1801 1765 184 71 33 chrX 159492879 159493244 -7157052 + MTE2a LTR MaLR 1 379 0 1 1801 993 90 0 0 chrX 159493360 159493504 -7156792 + L1Md_F2 LINE L1 6433 6576 -6 1 1801 251 256 43 43 chrX 159493535 159493629 -7156667 + L1M2 LINE L1 5715 5808 -489 1 1801 368 239 58 51 chrX 159493861 159493998 -7156298 + RSINE1 SINE B4 28 165 0 1 1801 25 0 0 0 chrX 159493998 159494023 -7156273 + AT_rich Low_complexity Low_complexity 1 25 0 1 1801 1833 239 30 0 chrX 159494055 159494452 -7155844 + MTD LTR MaLR 1 409 -10 1 1801 3609 234 48 63 chrX 159494456 159495553 -7154743 + MYSERV-int LTR ERVK 5468 6548 -2 1 1801 3077 144 26 34 chrX 159495554 159496086 -7154210 + RLTR11A LTR ERVK 1 528 0 1 1801 789 67 0 0 chrX 159496099 159496203 -7154093 + (TTCTC)n Simple_repeat Simple_repeat 4 107 0 1 1801 216 97 0 0 chrX 159496216 159496247 -7154049 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 1 1801 669 58 0 0 chrX 159496247 159496333 -7153963 + (TTTC)n Simple_repeat Simple_repeat 4 89 0 1 1801 337 265 8 136 chrX 159496333 159496396 -7153900 - PB1D10 SINE Alu -14 103 56 1 1801 1714 26 0 0 chrX 159496396 159496588 -7153708 - B2_Mm1a SINE B2 -1 192 1 1 1801 337 265 8 136 chrX 159496588 159496642 -7153654 - PB1D10 SINE Alu -62 55 1 1 1801 268 156 0 0 chrX 159497079 159497124 -7153172 + ID SINE ID 2 46 -178 1 1801 237 200 32 32 chrX 159497124 159497141 -7153155 + ID4_ SINE ID 2 63 -20 1 1801 212 0 36 0 chrX 159497203 159497231 -7153065 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 1801 646 264 107 10 chrX 159497237 159497472 -7152824 + Lx8 LINE L1 6806 7197 -447 1 1801 646 242 43 25 chrX 159497477 159497638 -7152658 + RSINE1 SINE B4 2 165 0 1 1801 594 140 0 39 chrX 159498268 159498372 -7151924 - B1_Mus2 SINE Alu -5 142 43 1 1801 576 280 0 27 chrX 159498472 159498619 -7151677 + RSINE1 SINE B4 7 149 -16 1 1801 706 247 55 0 chrX 159498829 159498975 -7151321 - RSINE1 SINE B4 -6 159 6 1 1801 461 97 54 0 chrX 159499222 159499315 -7150981 + C-rich Low_complexity Low_complexity 1 98 0 1 1801 759 192 14 7 chrX 159499317 159499464 -7150832 - B1_Mur1 SINE Alu -1 148 1 1 1801 641 177 97 0 chrX 159499519 159499643 -7150653 + B1_Mur2 SINE Alu 1 136 -13 1 1801 192 77 0 0 chrX 159499643 159499669 -7150627 + (CAGAA)n Simple_repeat Simple_repeat 1 26 0 1 1801 624 286 17 11 chrX 159499676 159499853 -7150443 - B3A SINE B2 -16 182 5 1 1801 334 336 18 0 chrX 159499864 159499977 -7150319 - PB1D10 SINE Alu -2 115 1 1 1801 1269 27 7 7 chrX 159500027 159500174 -7150122 - B1_Mus2 SINE Alu 0 147 1 1 1801 5297 14 0 0 chrX 159500186 159500774 -7149522 - L1Md_T LINE L1 0 6582 6023 2 1801 4277 202 42 19 chrX 159500778 159500790 -7149506 - Lx3C LINE L1 -4 6972 6962 3 1801 189 0 0 0 chrX 159500790 159500811 -7149485 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 4 1801 4277 202 42 19 chrX 159500811 159501737 -7148559 - Lx3C LINE L1 -15 6961 6013 3 1801 360 0 0 0 chrX 159502237 159502277 -7148019 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1801 318 87 0 0 chrX 159502305 159502351 -7147945 + (GGGA)n Simple_repeat Simple_repeat 4 49 0 6 1801 500 260 53 30 chrX 159502589 159502720 -7147576 - RSINE1 SINE B4 -29 136 3 7 1801 333 0 0 0 chrX 159502887 159502924 -7147372 + (TC)n Simple_repeat Simple_repeat 1 37 0 8 1801 986 110 32 0 chrX 159503019 159503174 -7147122 - URR1A DNA MER1_type 0 226 67 9 1801 724 244 142 28 chrX 159503197 159503450 -7146846 + MTD LTR MaLR 35 316 -103 1 1801 450 207 0 12 chrX 159503894 159503977 -7146319 + ID4 SINE ID 1 82 -1 1 1801 609 168 59 0 chrX 159504013 159504114 -7146182 - PB1D9 SINE Alu -13 107 1 1 1801 345 298 10 41 chrX 159504762 159504860 -7145436 + ID_B1 SINE B4 117 211 -13 1 1801 396 0 0 0 chrX 159504886 159504930 -7145366 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1801 315 0 0 0 chrX 159504930 159504964 -7145332 + (GA)n Simple_repeat Simple_repeat 1 35 0 1 1801 595 279 1 9 chrX 159505715 159505881 -7144415 - B3A SINE B2 -15 201 38 1 1801 245 300 11 11 chrX 159506289 159506380 -7143916 + RMER12 LTR ERVK 746 836 -486 1 1801 254 125 0 20 chrX 159506380 159506429 -7143867 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 1 1801 541 271 8 16 chrX 159506430 159506554 -7143742 - B1F1 SINE Alu -26 123 1 1 1801 191 224 99 62 chrX 159506889 159506970 -7143326 - MER5B DNA MER1_type -94 84 1 2 1801 645 229 30 8 chrX 159507103 159507235 -7143061 - B1_Mur1 SINE Alu -14 135 1 2 1801 931 202 27 14 chrX 159507373 159507591 -7142705 - ORR1C2 LTR MaLR 0 394 149 2 1801 948 244 33 56 chrX 159507588 159507801 -7142495 - 7SK RNA RNA -123 208 1 2 1801 592 181 16 94 chrX 159507805 159507970 -7142326 - ORR1C2 LTR MaLR -217 157 1 2 1801 1146 144 113 0 chrX 159508073 159508267 -7142029 - B3 SINE B2 0 216 1 2 1801 1438 144 124 32 chrX 159508500 159508752 -7141544 - Lx9 LINE L1 -8 7636 7355 2 1801 1166 51 58 0 chrX 159508752 159508890 -7141406 - B1_Mus1 SINE Alu -2 146 1 2 1801 1438 144 124 32 chrX 159508890 159508952 -7141344 - Lx9 LINE L1 -290 7354 7293 2 1801 306 0 0 0 chrX 159508994 159509028 -7141268 + (TC)n Simple_repeat Simple_repeat 1 34 0 2 1801 600 267 65 103 chrX 159509028 159509212 -7141084 - B3A SINE B2 -21 177 1 2 1801 699 227 117 0 chrX 159509328 159509491 -7140805 - B3A SINE B2 -15 183 2 2 1801 759 206 73 0 chrX 159509522 159509541 -7140755 - B1_Mus1 SINE Alu -2 146 128 3 1801 441 0 0 0 chrX 159509541 159509590 -7140706 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 1801 759 206 73 0 chrX 159509590 159509706 -7140590 - B1_Mus1 SINE Alu -21 127 2 3 1801 611 271 0 0 chrX 159510001 159510123 -7140173 + RSINE1 SINE B4 31 152 -13 3 1801 498 17 0 0 chrX 159510127 159510186 -7140110 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 1801 373 299 104 0 chrX 159510439 159510573 -7139723 - MLT1J LTR MaLR -361 151 4 3 1801 183 162 0 0 chrX 159510954 159510991 -7139305 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1801 608 200 49 16 chrX 159511146 159511268 -7139028 + ID_B1 SINE B4 82 207 -17 3 1801 261 0 0 0 chrX 159511270 159511299 -7138997 + (CCA)n Simple_repeat Simple_repeat 1 29 0 3 1801 320 191 31 16 chrX 159511317 159511381 -7138915 - RMER5 LTR ERV1 -14 520 456 3 1801 2536 122 70 3 chrX 159511381 159511750 -7138546 + ORR1B1 LTR MaLR 1 394 0 3 1801 749 231 25 20 chrX 159511753 159511952 -7138344 - RMER5 LTR ERV1 -131 403 204 3 1801 539 325 31 37 chrX 159511953 159512116 -7138180 + RSINE1 SINE B4 4 165 0 4 1801 831 231 87 16 chrX 159512147 159512332 -7137964 - B3A SINE B2 0 198 1 4 1801 327 287 85 20 chrX 159512337 159512490 -7137806 - RMER5 LTR ERV1 -320 214 52 3 1801 8024 57 17 1 chrX 159512691 159513970 -7136326 - L1_Mus1 LINE L1 0 6567 5267 4 225 30254 102 15 20 chrX 159513946 159519016 -7131280 - L1_Mus1 LINE L1 -2 6636 1604 4 1802 13351 42 5 3 chrX 159519012 159522249 -7128047 - L1Md_A LINE L1 0 6582 511 4 1802 218 275 0 55 chrX 159522267 159522284 -7128012 - B4A SINE B4 -142 150 114 4 1802 242 204 0 0 chrX 159522284 159522328 -7127968 - PB1D10 SINE Alu -65 52 9 4 1802 218 275 0 55 chrX 159522328 159522340 -7127956 - B4A SINE B4 -142 113 82 4 1802 368 211 70 0 chrX 159522378 159522449 -7127847 + ID4 SINE ID 2 77 -6 4 1802 421 283 78 61 chrX 159522456 159522701 -7127595 - MER33 DNA MER1_type -74 250 2 4 1802 273 230 0 0 chrX 159522721 159522795 -7127501 + CT-rich Low_complexity Low_complexity 3 76 0 4 1802 737 242 35 56 chrX 159523316 159523513 -7126783 + ID_B1 SINE B4 12 204 -20 4 1802 216 289 43 98 chrX 159523568 159523660 -7126636 - RSINE1 SINE B4 0 165 79 5 1802 332 247 32 0 chrX 159523794 159523887 -7126409 - Lx7 LINE L1 0 7696 7601 5 1802 259 357 50 42 chrX 159524022 159524046 -7126250 - B4A SINE B4 -88 204 86 5 1802 325 351 11 0 chrX 159524046 159524140 -7126156 - PB1D10 SINE Alu -22 95 1 5 1802 1214 88 0 0 chrX 159524263 159524410 -7125886 - B1_Mus1 SINE Alu -1 147 1 5 1802 1169 258 70 22 chrX 159524598 159524868 -7125428 - B4 SINE B4 -1 291 9 5 1802 779 323 18 17 chrX 159524899 159525138 -7125158 - ID_B1 SINE B4 -48 244 10 5 1802 199 290 149 20 chrX 159525592 159525740 -7124556 + MIRb SINE MIR 98 264 -4 5 1802 786 163 171 24 chrX 159525755 159525925 -7124371 + B3A SINE B2 1 195 -3 5 1802 509 267 16 184 chrX 159526215 159526497 -7123799 - ID_B1 SINE B4 -12 280 36 5 1802 574 243 0 0 chrX 159526914 159527021 -7123275 - ID_B1 SINE B4 -24 200 94 6 1802 284 324 39 33 chrX 159527139 159527292 -7123004 + L1MEd LINE L1 8 161 -5958 6 1802 744 254 55 6 chrX 159527297 159527479 -7122817 + ID_B1 SINE B4 2 192 -32 6 1802 254 298 41 73 chrX 159527382 159527505 -7122791 + B1_Mur4 SINE Alu 14 132 -18 6 1802 26 30 0 0 chrX 159527550 159527583 -7122713 + AT_rich Low_complexity Low_complexity 1 33 0 6 1802 331 365 145 17 chrX 159527588 159527878 -7122418 + L1MEd LINE L1 190 516 -5603 6 1802 939 235 5 48 chrX 159527884 159528090 -7122206 - B3A SINE B2 0 198 2 6 1802 2451 128 54 4 chrX 159528095 159528498 -7121798 + RLTR20D LTR ERVK 1 435 -99 6 1802 396 0 0 0 chrX 159528498 159528542 -7121754 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1802 796 267 182 105 chrX 159528542 159528629 -7121667 + RLTR20D LTR ERVK 436 567 -1 6 1802 325 293 40 49 chrX 159528724 159528923 -7121373 + L1MEd LINE L1 612 813 -5306 6 1802 849 284 102 55 chrX 159528923 159529285 -7121011 - MTEa LTR MaLR 0 379 1 6 1802 325 293 40 49 chrX 159529285 159529311 -7120985 + L1MEd LINE L1 814 835 -5284 6 1802 354 253 0 0 chrX 159529413 159529488 -7120808 + ID4 SINE ID 9 83 0 6 1802 321 237 53 0 chrX 159529563 159529639 -7120657 - ID4 SINE ID -2 81 2 7 1802 904 278 105 91 chrX 159530328 159530571 -7119725 - MER44D DNA MER2_type -39 666 440 7 1802 814 176 95 7 chrX 159530571 159530708 -7119588 - B1_Mur1 SINE Alu 0 149 1 7 1802 904 278 105 91 chrX 159530708 159530736 -7119560 - MER44D DNA MER2_type -266 439 423 7 1802 864 170 46 71 chrX 159530736 159530932 -7119364 - B3A SINE B2 -7 191 1 7 1802 904 278 105 91 chrX 159530932 159531153 -7119143 - MER44D DNA MER2_type -283 422 166 7 1802 495 303 59 109 chrX 159531179 159531435 -7118861 + B4A SINE B4 28 270 -22 7 1802 1042 97 0 12 chrX 159531466 159531708 -7118588 + (TTC)n Simple_repeat Simple_repeat 1 238 0 7 1802 22 0 0 0 chrX 159531745 159531767 -7118529 + AT_rich Low_complexity Low_complexity 1 22 0 7 1802 245 267 58 22 chrX 159531779 159531917 -7118379 - L1M4 LINE L1 -3585 2561 2419 7 1802 1081 193 260 0 chrX 159531933 159532202 -7118094 - MTEb LTR MaLR -40 339 1 7 1802 230 274 155 0 chrX 159532277 159532361 -7117935 - MER44D DNA MER2_type -606 99 3 7 1802 423 0 0 0 chrX 159532932 159532979 -7117317 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 1802 183 391 0 14 chrX 159533525 159533595 -7116701 + MIR SINE MIR 18 86 -122 8 1802 774 260 40 20 chrX 159533740 159533940 -7116356 + B3 SINE B2 4 207 -9 8 1802 210 143 0 0 chrX 159534096 159534131 -7116165 + (T)n Simple_repeat Simple_repeat 1 35 0 8 1802 1193 88 0 0 chrX 159534131 159534278 -7116018 - B1_Mus1 SINE Alu 0 148 2 8 1802 1469 253 55 24 chrX 159534346 159534726 -7115570 - MTD LTR MaLR -15 404 13 8 1802 734 262 65 24 chrX 159534741 159534898 -7115398 + B3 SINE B2 15 178 -38 8 1802 4094 139 9 13 chrX 159534898 159535533 -7114763 - RMER19A LTR ERVK 0 737 105 8 1802 1158 119 13 2 chrX 159535565 159535739 -7114557 + ORR1C2 LTR MaLR 1 178 -196 8 1802 297 0 0 0 chrX 159535739 159535772 -7114524 + (TC)n Simple_repeat Simple_repeat 2 34 0 8 1802 952 186 56 70 chrX 159535772 159535811 -7114485 + ORR1C2 LTR MaLR 179 210 -164 8 1802 1255 298 3 66 chrX 159535793 159536091 -7114205 + MTEa LTR MaLR 33 320 -59 8 1802 613 233 77 8 chrX 159536091 159536221 -7114075 - B1_Mur2 SINE Alu -7 142 4 9 1802 1255 298 3 66 chrX 159536221 159536288 -7114008 + MTEa LTR MaLR 321 375 -4 8 1802 820 281 0 6 chrX 159536785 159536964 -7113332 - B3A SINE B2 -18 180 3 9 1802 263 281 0 0 chrX 159536964 159537028 -7113268 - MIRc SINE MIR -112 156 93 9 1802 1069 113 189 31 chrX 159537040 159537231 -7113065 + URR1B DNA MER1_type 1 221 -4 9 1802 225 0 0 0 chrX 159538134 159538159 -7112137 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 1802 219 325 34 57 chrX 159538166 159538254 -7112042 - B1F SINE Alu -41 108 23 9 1802 1311 197 5 9 chrX 159538279 159538494 -7111802 + B3 SINE B2 3 216 0 9 1802 468 0 0 0 chrX 159538750 159538802 -7111494 + (TC)n Simple_repeat Simple_repeat 1 52 0 9 1802 516 221 6 114 chrX 159538810 159538968 -7111328 - MER68 LTR ERVL -264 299 159 9 1802 656 302 13 0 chrX 159538954 159539103 -7111193 - RSINE1 SINE B4 0 165 15 9 1802 321 89 0 0 chrX 159539252 159539297 -7110999 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 1802 270 315 137 71 chrX 159539850 159540062 -7110234 + MamGypLTR1b LTR Gypsy 528 753 -31 1 1802 664 233 0 8 chrX 159540356 159540486 -7109810 + B1F SINE Alu 21 149 0 1 1802 412 296 23 0 chrX 159541002 159541090 -7109206 - B3A SINE B2 -108 90 1 1 1802 1133 125 172 0 chrX 159541125 159541317 -7108979 + URR1B DNA MER1_type 1 225 0 1 1802 1018 236 38 19 chrX 159541616 159541828 -7108468 - B3 SINE B2 0 216 1 1 1802 1197 148 47 9 chrX 159541851 159542063 -7108233 - ORR1D1 LTR MaLR -154 220 1 1 1802 297 251 92 10 chrX 159542073 159542170 -7108126 - MLT1F1 LTR MaLR -144 425 305 1 1802 319 242 75 21 chrX 159542304 159542397 -7107899 - MLT1F1 LTR MaLR -463 106 9 1 1802 285 313 126 46 chrX 159542461 159542482 -7107814 - B3A SINE B2 -9 189 2 1 1802 773 274 0 0 chrX 159542482 159542635 -7107661 - RSINE1 SINE B4 -10 155 3 1 1802 609 321 0 0 chrX 159542807 159542941 -7107355 - ID_B1 SINE B4 -11 213 80 1 1802 1145 246 46 26 chrX 159542951 159543301 -7106995 - L1MA6 LINE L1 -6 6294 5938 1 1802 474 267 67 0 chrX 159543318 159543438 -7106858 - RSINE1 SINE B4 0 165 38 1 1802 273 278 21 46 chrX 159543446 159543601 -7106695 - L1MA4 LINE L1 -336 5967 5815 1 1802 321 26 0 0 chrX 159543850 159543888 -7106408 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1802 827 238 7 0 chrX 159543940 159544087 -7106209 + RSINE1 SINE B4 16 163 -2 1 1802 242 333 72 72 chrX 159544087 159544121 -7106175 + B3A SINE B2 15 195 -3 1 1802 3747 145 88 3 chrX 159544220 159544844 -7105452 - RMER1B Other Other -2 1064 388 1 1802 208 238 0 0 chrX 159545094 159545136 -7105160 + GA-rich Low_complexity Low_complexity 2 43 0 1 1802 942 124 0 33 chrX 159545438 159545621 -7104675 + CT-rich Low_complexity Low_complexity 1 177 0 1 1802 2609 216 87 35 chrX 159545671 159545878 -7104418 - RMER1C Other Other 0 1342 1124 1 1802 2836 158 36 0 chrX 159545878 159546328 -7103968 + RMER4A LTR ERVK 1 466 0 1 1802 2609 216 87 35 chrX 159546328 159546648 -7103648 - RMER1C Other Other -219 1123 782 1 1802 7993 34 0 0 chrX 159546648 159547533 -7102763 + L1Md_T LINE L1 5698 6582 0 1 1802 2609 216 87 35 chrX 159547533 159547633 -7102663 - RMER1C Other Other -561 781 682 1 1802 415 232 101 35 chrX 159547849 159548071 -7102225 - L1MA6 LINE L1 -627 5529 5281 1 1802 413 250 76 0 chrX 159548080 159548172 -7102124 - B3A SINE B2 -88 110 12 1 1802 456 19 0 0 chrX 159548335 159548388 -7101908 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1802 740 238 37 0 chrX 159548388 159548552 -7101744 - B3 SINE B2 -22 194 25 1 1802 214 333 0 36 chrX 159548731 159548787 -7101509 + L2c LINE L2 3284 3337 -50 1 1802 396 0 0 0 chrX 159548979 159549023 -7101273 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1802 262 216 79 26 chrX 159549199 159549275 -7101021 + MTD LTR MaLR 334 413 -6 1 1802 644 253 144 12 chrX 159549315 159549475 -7100821 + B3A SINE B2 2 182 -16 1 1802 1283 54 0 0 chrX 159549687 159549834 -7100462 - B1_Mus2 SINE Alu 0 147 1 1 1802 228 283 33 0 chrX 159550041 159550101 -7100195 + tRNA-Ser-TCY tRNA tRNA 1 62 -23 1 1802 519 171 116 116 chrX 159551187 159551359 -7098937 - B3A SINE B2 0 198 27 1 1802 195 289 48 95 chrX 159551870 159551996 -7098300 - MIR SINE MIR -113 149 30 1 1802 456 77 39 0 chrX 159552288 159552366 -7097930 + (CA)n Simple_repeat Simple_repeat 1 81 0 1 1802 1907 155 102 17 chrX 159552705 159552860 -7097436 + ORR1C2 LTR MaLR 1 185 -199 1 1802 428 70 0 27 chrX 159552860 159552934 -7097362 + (TCTCTG)n Simple_repeat Simple_repeat 2 73 0 1 1802 207 114 0 0 chrX 159552934 159552969 -7097327 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1802 1907 155 102 17 chrX 159552969 159553166 -7097130 + ORR1C2 LTR MaLR 186 383 -1 1 1802 629 172 123 7 chrX 159553200 159553346 -7096950 - ORR1D2 LTR MaLR 0 370 208 1 1802 491 156 25 11 chrX 159553640 159553747 -7096549 - ORR1D2 LTR MaLR -246 113 1 1 1802 305 399 79 50 chrX 159553781 159554058 -7096238 + LTR88a LTR Gypsy 158 442 -374 1 1802 1083 272 28 125 chrX 159554346 159554665 -7095631 - B4 SINE B4 -2 290 3 1 1802 304 233 82 0 chrX 159554671 159554744 -7095552 - ID_B1 SINE B4 -2 222 144 1 1802 510 197 99 33 chrX 159554750 159554871 -7095425 - ID_B1 SINE B4 -2 222 94 1 1802 188 163 23 0 chrX 159555160 159555203 -7095093 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1802 488 16 16 0 chrX 159555206 159555267 -7095029 + (GA)n Simple_repeat Simple_repeat 1 62 0 1 1802 678 253 32 42 chrX 159555267 159555457 -7094839 - B4A SINE B4 -103 189 2 1 1802 251 228 17 17 chrX 159555798 159555856 -7094440 + GA-rich Low_complexity Low_complexity 2 59 0 1 1802 5493 259 500 14 chrX 159556131 159556282 -7094014 - Lx5 LINE L1 -206 6852 6633 1 1802 423 0 0 0 chrX 159556282 159556329 -7093967 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1802 8734 170 49 31 chrX 159556329 159557574 -7092722 - Lx5 LINE L1 -418 6632 5357 1 1802 5366 57 3 4 chrX 159557574 159558249 -7092047 - L1Md_F2 LINE L1 -6 6576 5903 1 1802 8734 142 76 63 chrX 159558249 159558670 -7091626 - Lx5 LINE L1 -521 5356 4917 1 1802 1703 15 0 0 chrX 159558670 159558869 -7091427 - L1Md_T LINE L1 0 6582 6384 1 1802 8734 142 76 63 chrX 159558869 159559287 -7091009 - Lx5 LINE L1 -961 4916 4453 1 1802 235 246 0 127 chrX 159559287 159559366 -7090930 + RMER21A LTR ERV1 420 488 -459 1 1802 8734 142 76 63 chrX 159559366 159559651 -7090645 - Lx5 LINE L1 -961 4452 4134 1 1802 676 244 178 101 chrX 159559772 159560127 -7090169 - Lx8 LINE L1 -8 7465 7084 1 1802 351 0 0 0 chrX 159560182 159560221 -7090075 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 1802 360 0 0 0 chrX 159560221 159560260 -7090036 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1802 432 0 0 0 chrX 159560260 159560307 -7089989 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1802 491 297 23 8 chrX 159560478 159560607 -7089689 - RSINE1 SINE B4 -22 143 13 1 1802 231 36 0 0 chrX 159561603 159561631 -7088665 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1802 1339 228 4 25 chrX 159561635 159561914 -7088382 - B4 SINE B4 -19 273 1 1 1802 226 268 60 12 chrX 159561938 159562021 -7088275 + 4.5SRNA scRNA scRNA 2 88 -6 1 1802 577 206 0 0 chrX 159561965 159562072 -7088224 + B1_Mm SINE Alu 36 142 -5 1 1802 310 175 0 24 chrX 159562072 159562154 -7088142 + GA-rich Low_complexity Low_complexity 2 81 0 1 1802 4029 44 0 0 chrX 159562627 159563103 -7087193 + L1Md_T LINE L1 6107 6582 0 1 1802 233 324 0 0 chrX 159563380 159563451 -7086845 - ID_B1 SINE B4 -9 215 145 1 1802 697 281 31 29 chrX 159563500 159563776 -7086520 - ID_B1 SINE B4 -67 225 1 1 1802 220 323 0 16 chrX 159564155 159564218 -7086078 + polypurine Low_complexity Low_complexity 5 66 0 1 1802 364 317 61 32 chrX 159564639 159564919 -7085377 - B4A SINE B4 -2 290 3 1 1802 234 91 0 0 chrX 159565071 159565104 -7085192 - ID_B1 SINE B4 -62 162 130 1 1802 1063 206 24 5 chrX 159565364 159565574 -7084722 + ID_B1 SINE B4 10 223 -1 1 1802 426 232 10 20 chrX 159565668 159565769 -7084527 - LTR40b LTR ERVL -11 451 352 1 1802 393 81 0 0 chrX 159565841 159565903 -7084393 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 1802 532 275 0 30 chrX 159565908 159566043 -7084253 - RSINE1 SINE B4 -22 143 13 1 1802 1257 231 42 0 chrX 159566084 159566348 -7083948 - ORR1D2 LTR MaLR -95 275 1 1 1802 277 262 0 0 chrX 159566925 159566986 -7083310 - RSINE1 SINE B4 -97 68 8 1 1802 450 0 0 0 chrX 159567031 159567081 -7083215 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1802 698 283 12 6 chrX 159567087 159567254 -7083042 - B3A SINE B2 -30 168 1 1 1802 831 231 30 47 chrX 159567272 159567508 -7082788 - L1M4 LINE L1 -1333 4813 4582 1 1802 423 223 106 0 chrX 159567617 159567711 -7082585 - RSINE1 SINE B4 -58 107 4 1 1802 289 322 85 66 chrX 159567849 159568108 -7082188 + ORR1E LTR MaLR 96 359 0 1 1802 409 284 0 0 chrX 159568377 159568465 -7081831 - ID_B1 SINE B4 -54 170 83 1 1802 318 87 0 0 chrX 159568674 159568720 -7081576 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1802 315 146 0 0 chrX 159568720 159568775 -7081521 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 1802 575 216 9 0 chrX 159568777 159568888 -7081408 - RSINE1 SINE B4 -44 121 10 1 1802 1155 36 0 0 chrX 159568939 159569079 -7081217 + (TTTC)n Simple_repeat Simple_repeat 2 141 0 1 1802 272 267 98 22 chrX 159569090 159569182 -7081114 - PB1D9 SINE Alu -21 99 1 1 1802 603 250 12 81 chrX 159569182 159569274 -7081022 - B4 SINE B4 -206 86 6 1 1802 498 17 0 0 chrX 159569618 159569677 -7080619 + (CAA)n Simple_repeat Simple_repeat 2 60 0 1 1802 673 295 51 118 chrX 159569682 159569819 -7080477 + ORR1E LTR MaLR 6 124 -235 1 1802 453 36 0 0 chrX 159569819 159569874 -7080422 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 1 1802 673 295 51 118 chrX 159569874 159569904 -7080392 + ORR1E LTR MaLR 125 136 -223 1 1802 307 226 331 0 chrX 159569904 159570037 -7080259 - B3A SINE B2 -18 180 4 1 1802 673 295 51 118 chrX 159570037 159570241 -7080055 + ORR1E LTR MaLR 137 353 -6 1 1802 815 248 41 157 chrX 159571162 159571531 -7078765 - MTE2a LTR MaLR -51 328 3 1 1802 1087 70 0 40 chrX 159571532 159571670 -7078626 + B1_Mm SINE Alu 2 134 -13 1 1802 326 23 23 0 chrX 159571670 159571713 -7078583 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 1 1802 1087 70 0 40 chrX 159571713 159571724 -7078572 + B1_Mm SINE Alu 135 145 -2 1 1802 225 0 0 0 chrX 159571724 159571749 -7078547 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1 1802 482 222 55 30 chrX 159572430 159572578 -7077718 - Lx6 LINE L1 -385 7075 6994 1 1802 1200 253 28 37 chrX 159572561 159572885 -7077411 + Lx6 LINE L1 7095 7415 -45 1 1802 1179 162 115 4 chrX 159572984 159573244 -7077052 - Lx9 LINE L1 -6 7638 7350 1 1802 420 291 0 18 chrX 159573304 159573416 -7076880 - ID_B1 SINE B4 -31 193 84 1 1802 407 190 62 25 chrX 159573646 159573808 -7076488 + CT-rich Low_complexity Low_complexity 3 170 0 1 1802 30 27 0 0 chrX 159574242 159574279 -7076017 + AT_rich Low_complexity Low_complexity 1 37 0 1 1802 633 258 0 55 chrX 159574282 159574446 -7075850 - RSINE1 SINE B4 0 165 11 1 1802 430 215 3 11 chrX 159575019 159575139 -7075157 + B1F1 SINE Alu 3 148 -1 1 1802 506 303 42 42 chrX 159575154 159575395 -7074901 + B4A SINE B4 8 248 -44 2 1802 330 147 324 26 chrX 159575462 159575573 -7074723 - B2_Mm2 SINE B2 -5 190 47 2 1802 1251 96 6 17 chrX 159575639 159575819 -7074477 - B2_Mm1t SINE B2 -14 179 2 2 1802 335 272 12 0 chrX 159575865 159575946 -7074350 + PB1D7 SINE Alu 11 92 -28 2 1802 180 0 0 0 chrX 159576066 159576086 -7074210 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1802 1804 257 64 17 chrX 159576119 159576601 -7073695 + Lx7 LINE L1 6817 7321 -375 2 1802 620 271 7 0 chrX 159576746 159576901 -7073395 + B3A SINE B2 1 156 -42 2 1802 273 234 15 30 chrX 159577048 159577114 -7073182 + RSINE1 SINE B4 4 68 -97 2 1802 626 214 121 8 chrX 159577211 159577343 -7072953 + B1_Mur2 SINE Alu 2 148 -1 2 1802 5494 208 172 27 chrX 159577967 159579428 -7070868 - Lx7 LINE L1 -1 7695 6023 2 1802 3812 172 30 27 chrX 159579416 159579939 -7070357 - L1_Mur3 LINE L1 -3487 2393 1871 2 1802 4295 92 57 3 chrX 159579939 159580559 -7069737 + Lx LINE L1 5999 6651 -3 2 1802 3812 172 30 27 chrX 159580559 159580811 -7069485 - L1_Mur3 LINE L1 -4010 1870 1616 2 1802 886 235 15 10 chrX 159580953 159581159 -7069137 + B3 SINE B2 3 209 -7 2 1802 383 281 39 118 chrX 159581170 159581323 -7068973 - RSINE1 SINE B4 0 165 25 2 1802 675 0 0 0 chrX 159581345 159581420 -7068876 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 2 1802 696 205 0 0 chrX 159582820 159582947 -7067349 - B1_Mur1 SINE Alu -7 142 16 2 1802 1235 21 0 0 chrX 159582998 159583138 -7067158 + B1_Mus1 SINE Alu 2 141 -7 2 1802 205 88 0 29 chrX 159583187 159583222 -7067074 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1802 775 184 80 11 chrX 159583230 159583406 -7066890 + B3A SINE B2 5 192 -6 2 1802 21 36 0 0 chrX 159583734 159583762 -7066534 + AT_rich Low_complexity Low_complexity 1 28 0 2 1802 291 333 81 7 chrX 159583942 159584090 -7066206 + MLT1C LTR MaLR 283 441 -26 2 1802 617 217 8 0 chrX 159584111 159584240 -7066056 - ID_B1 SINE B4 -1 223 94 2 1802 440 287 77 65 chrX 159584242 159584410 -7065886 + B3A SINE B2 2 171 -27 2 1802 518 250 0 0 chrX 159584452 159584556 -7065740 + RSINE1 SINE B4 60 163 -2 2 1802 191 140 0 50 chrX 159585129 159585189 -7065107 + A-rich Low_complexity Low_complexity 1 57 0 2 1802 15824 64 9 1 chrX 159585617 159588322 -7061974 - L1Md_F2 LINE L1 -1 6581 3857 2 1802 829 93 0 0 chrX 159588322 159588429 -7061867 - U6 snRNA snRNA 0 107 1 2 1802 617 278 81 0 chrX 159588430 159588603 -7061693 - ID_B1 SINE B4 -11 213 27 2 1802 1827 102 63 17 chrX 159588613 159588912 -7061384 - L1Md_F2 LINE L1 -1 6581 6269 2 1802 717 258 15 44 chrX 159588975 159589178 -7061118 - B3A SINE B2 -1 197 1 2 1802 240 35 0 0 chrX 159589227 159589256 -7061040 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 1802 513 278 27 14 chrX 159589257 159589403 -7060893 - RSINE1 SINE B4 -15 150 3 2 1802 437 269 127 37 chrX 159589519 159589708 -7060588 - MLT1F LTR MaLR -30 518 313 2 1802 1160 275 65 14 chrX 159589712 159589898 -7060398 + MTEa LTR MaLR 6 200 -179 2 1802 513 0 0 0 chrX 159589898 159589955 -7060341 + (TC)n Simple_repeat Simple_repeat 2 58 0 2 1802 1160 275 65 14 chrX 159589955 159590122 -7060174 + MTEa LTR MaLR 201 376 -3 2 1802 364 306 37 7 chrX 159590381 159590516 -7059780 - MLT1F LTR MaLR -422 147 9 2 1802 453 309 0 21 chrX 159590711 159590853 -7059443 - B1F SINE Alu -9 140 2 2 1802 198 0 0 0 chrX 159590854 159590876 -7059420 + (TTG)n Simple_repeat Simple_repeat 2 23 0 2 1802 243 0 0 0 chrX 159591099 159591126 -7059170 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1802 791 29 5 6 chrX 159591126 159591246 -7059050 - B1_Mus2 SINE Alu -8 141 23 2 1802 518 162 124 18 chrX 159591959 159592072 -7058224 + B3A SINE B2 48 172 -26 2 1802 324 0 0 0 chrX 159592083 159592119 -7058177 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 1802 249 33 0 0 chrX 159592119 159592148 -7058148 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1802 983 60 15 0 chrX 159592148 159592281 -7058015 + (GGGAGA)n Simple_repeat Simple_repeat 4 139 0 2 1802 1668 203 46 22 chrX 159592502 159592870 -7057426 - MTE2b LTR MaLR -1 378 2 2 1802 793 261 43 19 chrX 159593717 159593928 -7056368 - B3 SINE B2 0 216 1 2 1802 949 225 115 47 chrX 159594039 159594423 -7055873 - L1MA4A LINE L1 -376 5927 5447 2 1802 671 270 23 54 chrX 159594598 159594962 -7055334 + B4A SINE B4 5 262 -30 2 1802 453 36 0 0 chrX 159594980 159595035 -7055261 + (GGGA)n Simple_repeat Simple_repeat 3 57 0 2 1802 236 288 166 18 chrX 159595080 159595243 -7055053 + LTR41B LTR ERVL 1 187 -571 2 1802 216 237 0 0 chrX 159595581 159595619 -7054677 + polypyrimidine Low_complexity Low_complexity 4 41 0 2 1802 375 283 56 103 chrX 159595637 159595889 -7054407 - L1MB7 LINE L1 -29 6155 5916 2 1802 539 253 25 25 chrX 159595898 159596056 -7054240 - L1MB7 LINE L1 -410 5774 5617 2 1802 581 186 0 0 chrX 159596112 159596209 -7054087 - B1_Mur4 SINE Alu -40 110 14 2 1802 503 285 66 0 chrX 159596418 159596555 -7053741 + B1F1 SINE Alu 1 146 -3 2 1802 628 256 33 51 chrX 159596601 159596815 -7053481 - B3 SINE B2 -6 210 1 2 1802 354 281 14 136 chrX 159597150 159597290 -7053006 + RSINE1 SINE B4 6 128 -37 2 1802 24 32 0 0 chrX 159598650 159598681 -7051615 + AT_rich Low_complexity Low_complexity 1 31 0 2 1802 405 0 0 0 chrX 159598681 159598726 -7051570 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 1802 389 307 35 45 chrX 159598998 159599177 -7051119 - MER58A DNA MER1_type -3 221 45 2 1802 295 172 0 0 chrX 159599177 159599235 -7051061 + ID SINE ID 1 58 -166 2 1802 1434 182 28 14 chrX 159599240 159599529 -7050767 - MTC LTR MaLR 0 421 129 2 1802 322 269 133 57 chrX 159599661 159599819 -7050477 + MER5B DNA MER1_type 9 178 0 2 1802 243 237 0 0 chrX 159599863 159599922 -7050374 + MER58D DNA MER1_type 328 386 0 2 1802 502 215 24 24 chrX 159600155 159600279 -7050017 + Ricksha_c DNA MuDR 363 486 -1562 2 1802 1350 217 57 99 chrX 159600309 159600693 -7049603 + MTE2b LTR MaLR 7 374 -5 2 1802 1354 273 26 34 chrX 159600694 159601080 -7049216 + Ricksha_c DNA MuDR 525 907 -1141 2 1802 688 283 76 0 chrX 159601317 159601515 -7048781 + ID_B1 SINE B4 12 224 0 2 1802 713 174 83 0 chrX 159601519 159601651 -7048645 + B1_Mus2 SINE Alu 2 144 -3 2 1802 1450 236 21 42 chrX 159601705 159601786 -7048510 + MTE2b LTR MaLR 1 81 -298 2 1802 3795 61 2 11 chrX 159601786 159602264 -7048032 - MT2C_Mm LTR ERVL -1 474 1 2 1802 1450 236 21 42 chrX 159602264 159602566 -7047730 + MTE2b LTR MaLR 82 376 -3 2 1802 1152 241 37 14 chrX 159603310 159603604 -7046692 + MTEa LTR MaLR 21 321 -58 2 1802 776 237 119 0 chrX 159603701 159603895 -7046401 - ID_B1 SINE B4 -5 219 3 2 1802 713 267 76 5 chrX 159603896 159604107 -7046189 - MER2 DNA MER2_type -119 226 1 2 1802 225 65 0 0 chrX 159604501 159604532 -7045764 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 2 1802 358 179 33 87 chrX 159604551 159604643 -7045653 - RSINE1 SINE B4 -38 127 41 2 1802 347 229 0 0 chrX 159605476 159605546 -7044750 + L1MA4 LINE L1 5531 5600 -697 2 1802 726 262 32 16 chrX 159605553 159605699 -7044597 + B3A SINE B2 2 152 -46 2 1802 402 39 0 0 chrX 159605699 159605751 -7044545 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 1802 726 262 32 16 chrX 159605751 159605794 -7044502 + B3A SINE B2 153 193 -5 2 1802 734 276 44 89 chrX 159605827 159606055 -7044241 + L1MA4 LINE L1 5580 5800 -373 2 1802 1306 163 5 0 chrX 159606055 159606258 -7044038 - B3 SINE B2 -12 204 1 2 1802 734 283 42 98 chrX 159606258 159606433 -7043863 + L1MA4 LINE L1 5769 5929 -371 2 1802 6197 147 182 125 chrX 159607310 159608544 -7041752 - L1_Mm LINE L1 -1109 4774 3315 2 1802 1396 42 0 36 chrX 159608544 159608740 -7041556 + ORR1A1 LTR MaLR 158 346 0 2 1802 6197 147 182 125 chrX 159608740 159609140 -7041156 - L1_Mm LINE L1 -1109 3314 2840 2 1802 663 241 86 140 chrX 159609555 159609927 -7040369 - MTE2a LTR MaLR -22 357 6 2 1802 23 33 0 0 chrX 159610325 159610355 -7039941 + AT_rich Low_complexity Low_complexity 1 30 0 2 1802 326 91 0 43 chrX 159612012 159612081 -7038215 + (A)n Simple_repeat Simple_repeat 1 66 0 2 1802 29559 74 25 1 chrX 159612683 159617443 -7032853 + L1Md_F LINE L1 185 5060 -823 2 1802 3759 66 17 6 chrX 159617443 159617914 -7032382 + L1Md_F2 LINE L1 6106 6581 -1 2 1802 320 0 25 0 chrX 159618012 159618052 -7032244 + (TTA)n Simple_repeat Simple_repeat 1 41 0 2 1802 486 156 13 13 chrX 159618220 159618298 -7031998 - ID4 SINE ID -2 81 4 2 1802 229 306 0 0 chrX 159618304 159618366 -7031930 - MER20 DNA MER1_type -24 195 134 2 1802 939 204 62 50 chrX 159618417 159618512 -7031784 + RMER5 LTR ERV1 49 149 -385 2 1802 4796 86 154 82 chrX 159618512 159619357 -7030939 - RMER17A2 LTR ERVK 0 906 1 2 1802 939 204 62 50 chrX 159619357 159619519 -7030777 + RMER5 LTR ERV1 150 309 -225 2 1802 630 111 81 49 chrX 159619508 159619631 -7030665 + ORR1C1 LTR MaLR 252 378 0 2 1802 298 280 169 81 chrX 159620084 159620344 -7029952 + ORR1E LTR MaLR 18 300 -59 2 1802 198 0 0 0 chrX 159620375 159620397 -7029899 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 2 1802 576 277 0 0 chrX 159620421 159620540 -7029756 - RSINE1 SINE B4 -43 122 4 2 1802 623 259 53 0 chrX 159620544 159620675 -7029621 - ID_B1 SINE B4 -2 222 85 2 1802 330 293 203 70 chrX 159620766 159621151 -7029145 + MLT1H2 LTR MaLR 54 489 0 2 1802 263 400 42 12 chrX 159621290 159621457 -7028839 + MIR SINE MIR 15 186 -76 2 1802 656 291 13 7 chrX 159621489 159621649 -7028647 - ID_B1 SINE B4 -46 246 84 2 1802 437 243 0 93 chrX 159621998 159622116 -7028180 + ID_B1 SINE B4 111 217 -7 2 1802 32 26 0 0 chrX 159622487 159622526 -7027770 + AT_rich Low_complexity Low_complexity 1 39 0 2 1802 770 239 33 22 chrX 159622547 159622727 -7027569 - B3A SINE B2 -16 182 1 2 1802 279 0 0 0 chrX 159622907 159622938 -7027358 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1802 348 43 0 0 chrX 159622938 159622983 -7027313 + (GA)n Simple_repeat Simple_repeat 1 46 0 3 1802 1152 205 106 35 chrX 159622986 159623269 -7027027 + MTD LTR MaLR 117 419 0 3 1802 966 149 131 20 chrX 159623770 159623969 -7026327 - RLTR16 LTR ERVK 0 505 285 3 1802 830 244 33 98 chrX 159624831 159625076 -7025220 + B4 SINE B4 1 229 -63 3 1802 679 256 29 77 chrX 159625077 159625284 -7025012 + B3A SINE B2 2 198 0 3 1802 1258 182 34 0 chrX 159625310 159625519 -7024777 - B3 SINE B2 0 216 1 3 1802 1079 242 126 34 chrX 159625701 159625858 -7024438 - MTD LTR MaLR 0 419 251 3 1802 1157 153 119 0 chrX 159625858 159626060 -7024236 - URR1A DNA MER1_type 0 226 1 3 1802 1079 242 126 34 chrX 159626060 159626171 -7024125 - MTD LTR MaLR -169 250 126 3 1802 383 127 18 0 chrX 159626352 159626407 -7023889 - MTD LTR MaLR -298 121 66 3 1802 410 269 8 25 chrX 159626503 159626625 -7023671 + MER82 DNA MER2_type 2 121 -532 3 1802 2223 145 22 11 chrX 159627060 159627429 -7022867 - Lx4B LINE L1 -58 7000 6628 3 1802 646 263 82 96 chrX 159627940 159628313 -7021983 + RMER15 LTR ERVL 3 485 -90 3 1802 3387 120 65 4 chrX 159628583 159629077 -7021219 + RLTR28 LTR ERVL 1 524 0 3 1802 783 314 126 30 chrX 159629354 159629719 -7020577 - MT2A LTR ERVL 0 533 134 3 1802 274 323 83 60 chrX 159629640 159629808 -7020488 - MTEa LTR MaLR -161 218 47 3 1802 466 200 47 0 chrX 159630363 159630448 -7019848 - 5S rRNA rRNA -32 89 1 3 1802 250 250 21 0 chrX 159631507 159631555 -7018741 - B1F1 SINE Alu -97 52 4 3 1802 226 268 143 0 chrX 159631511 159631567 -7018729 - ID_B1 SINE B4 -96 128 65 3 1802 1910 151 16 3 chrX 159631583 159631895 -7018401 + ORR1B2 LTR MaLR 52 367 0 3 1802 464 300 128 84 chrX 159631945 159632407 -7017889 - Lx8 LINE L1 -22 7451 6970 3 1802 397 34 17 17 chrX 159632416 159632476 -7017820 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1802 728 273 48 11 chrX 159632629 159632818 -7017478 - B3 SINE B2 -3 213 18 3 1802 321 70 3 0 chrX 159632878 159632926 -7017370 + ORR1C2 LTR MaLR 1 49 -310 3 1802 351 319 77 137 chrX 159632990 159633303 -7016993 + MLT1A0 LTR MaLR 59 352 -13 3 1802 4408 168 27 3 chrX 159633308 159634002 -7016294 + Lx5 LINE L1 6332 7042 -8 3 1802 1268 13 7 0 chrX 159634256 159634406 -7015890 + (TTTTC)n Simple_repeat Simple_repeat 2 152 0 3 1802 1136 52 66 0 chrX 159634407 159634543 -7015753 - B1_Mus1 SINE Alu -3 145 1 3 1802 330 310 0 35 chrX 159634899 159634986 -7015310 + B3A SINE B2 71 154 -44 3 1802 405 0 0 0 chrX 159634987 159635032 -7015264 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1802 297 0 0 0 chrX 159635032 159635064 -7015232 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 1802 596 238 20 27 chrX 159635561 159635708 -7014588 - B1F SINE Alu -1 148 3 3 1802 210 324 29 0 chrX 159635733 159635801 -7014495 - ID4_ SINE ID 0 83 14 3 1802 867 159 166 26 chrX 159635914 159636107 -7014189 + URR1A DNA MER1_type 7 226 0 3 1802 3306 210 38 106 chrX 159636466 159636692 -7013604 + RCHARR1 DNA MER1_type 9 208 -766 3 1802 784 199 13 40 chrX 159636692 159636844 -7013452 - B1_Mur1 SINE Alu 0 149 2 3 1802 3306 210 38 106 chrX 159636844 159637555 -7012741 + RCHARR1 DNA MER1_type 209 882 -92 3 1802 641 283 19 114 chrX 159637572 159637783 -7012513 - B3A SINE B2 -7 191 1 3 1802 322 265 11 88 chrX 159637814 159637861 -7012435 - RSINE1 SINE B4 -1 164 121 3 1802 1052 175 70 256 chrX 159637861 159638321 -7011975 + ORR1D1 LTR MaLR 1 374 0 3 1802 322 265 11 88 chrX 159638321 159638364 -7011932 - RSINE1 SINE B4 -45 120 81 3 1802 1726 47 0 14 chrX 159639122 159639339 -7010957 + L1Md_F2 LINE L1 6366 6579 -3 3 1802 382 350 14 0 chrX 159639439 159639556 -7010740 + polypyrimidine Low_complexity Low_complexity 26 144 0 3 1802 252 233 120 27 chrX 159639556 159639631 -7010665 - ID2 SINE ID 0 83 2 3 1802 382 350 14 0 chrX 159639631 159639653 -7010643 + polypyrimidine Low_complexity Low_complexity 4 25 0 3 1802 772 263 26 26 chrX 159639666 159639861 -7010435 - ID_B1 SINE B4 -25 199 5 3 1802 350 213 13 13 chrX 159639865 159639941 -7010355 - MER34 LTR ERV1 -97 445 370 3 1802 872 296 20 16 chrX 159640782 159641029 -7009267 - B4A SINE B4 -6 286 39 3 1802 974 165 42 16 chrX 159641042 159641233 -7009063 - ORR1C2 LTR MaLR -14 370 175 3 1802 717 163 19 7 chrX 159641238 159641392 -7008904 + GA-rich Low_complexity Low_complexity 3 158 0 3 1802 1128 89 84 0 chrX 159641395 159641574 -7008722 - ORR1C2 LTR MaLR -190 194 1 3 1802 278 314 125 96 chrX 159641693 159641746 -7008550 - B4A SINE B4 -14 278 231 3 1802 357 62 0 0 chrX 159641746 159641794 -7008502 + (CCTA)n Simple_repeat Simple_repeat 2 49 0 3 1802 278 312 125 85 chrX 159641794 159641807 -7008489 - B4A SINE B4 -62 230 201 3 1802 426 263 10 29 chrX 159641807 159641909 -7008387 - PB1D10 SINE Alu -8 109 10 3 1802 278 312 125 85 chrX 159641909 159641989 -7008307 - B4A SINE B4 -62 200 2 3 1802 402 21 0 0 chrX 159642261 159642308 -7007988 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1802 1141 235 45 31 chrX 159642318 159642604 -7007692 - B4A SINE B4 -2 290 1 3 1802 241 330 39 89 chrX 159642625 159642828 -7007468 + MIRb SINE MIR 68 260 -8 3 1802 862 180 202 0 chrX 159643720 159643903 -7006393 + URR1B DNA MER1_type 5 224 -1 3 1802 674 250 183 18 chrX 159643938 159644162 -7006134 + RMER15 LTR ERVL 315 575 0 3 1802 360 0 0 0 chrX 159645068 159645108 -7005188 + (GA)n Simple_repeat Simple_repeat 2 41 0 3 1802 365 327 56 145 chrX 159645153 159645457 -7004839 - B4 SINE B4 -13 279 3 3 1802 405 205 16 8 chrX 159645473 159645601 -7004695 + CT-rich Low_complexity Low_complexity 3 131 0 3 225 1098 251 30 47 chrX 159645601 159645898 -7004398 - B4 SINE B4 0 292 1 3 1803 21 36 0 0 chrX 159645943 159645971 -7004325 + AT_rich Low_complexity Low_complexity 1 28 0 3 1803 557 266 61 61 chrX 159645988 159646168 -7004128 - B3A SINE B2 -16 182 3 3 1803 201 74 0 0 chrX 159646601 159646628 -7003668 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1803 254 233 117 0 chrX 159647362 159647422 -7002874 + MLT2C1 LTR ERVL 14 80 -317 3 1803 213 39 0 0 chrX 159647443 159647469 -7002827 + (CAAT)n Simple_repeat Simple_repeat 1 26 0 3 1803 240 35 0 0 chrX 159647469 159647497 -7002799 + (CAAG)n Simple_repeat Simple_repeat 3 31 0 3 1803 1189 280 33 11 chrX 159647536 159647935 -7002361 - L1_Mur3 LINE L1 -446 5738 5314 3 1803 28 48 0 0 chrX 159647942 159647984 -7002312 + AT_rich Low_complexity Low_complexity 1 42 0 3 1803 434 332 50 30 chrX 159648154 159648353 -7001943 - B4A SINE B4 -18 274 72 3 1803 579 232 77 7 chrX 159648398 159648541 -7001755 + MLT2C1 LTR ERVL 124 276 -121 3 1803 486 0 0 0 chrX 159648661 159648715 -7001581 + (TTA)n Simple_repeat Simple_repeat 1 54 0 3 1803 2978 167 63 14 chrX 159648716 159649433 -7000863 - Lx3C LINE L1 -11 6965 6186 3 1803 353 39 0 0 chrX 159649438 159649489 -7000807 - Lx LINE L1 -2 6652 6602 3 1803 559 228 31 0 chrX 159649579 159649706 -7000590 + RMER20B LTR ERVK 234 364 -263 3 1803 1292 249 186 6 chrX 159649864 159650219 -7000077 + MTD LTR MaLR 1 419 0 3 1803 414 309 34 74 chrX 159650232 159650407 -6999889 - MER20 DNA MER1_type -45 174 7 3 1803 369 281 180 8 chrX 159650620 159650742 -6999554 - RSINE1 SINE B4 -19 146 4 3 1803 1070 131 199 0 chrX 159651007 159651183 -6999113 - B3 SINE B2 -5 211 1 3 1803 2074 168 62 3 chrX 159651295 159651648 -6998648 + ORR1D1 LTR MaLR 1 374 0 3 1803 1636 217 74 11 chrX 159651818 159652195 -6998101 - RMER19C LTR ERVK 0 611 211 3 1803 280 281 0 110 chrX 159652195 159652215 -6998081 + MT2B LTR ERVL 147 155 -446 3 1803 466 274 0 0 chrX 159652215 159652310 -6997986 + PB1D9 SINE Alu 1 95 -25 3 1803 317 359 52 7 chrX 159652376 159652530 -6997766 + MIR3 SINE MIR 43 203 -5 3 1803 1206 239 98 21 chrX 159652817 159653011 -6997285 - ORR1D1 LTR MaLR -2 372 156 3 1803 642 80 16 31 chrX 159653011 159653140 -6997156 + (CAGAGA)n Simple_repeat Simple_repeat 6 132 0 3 1803 1206 239 98 21 chrX 159653140 159653283 -6997013 - ORR1D1 LTR MaLR -219 155 9 3 1803 357 378 15 7 chrX 159653306 159653442 -6996854 + L2b LINE L2 3221 3357 -18 3 1803 407 304 42 62 chrX 159654608 159654752 -6995544 + MLT1J2 LTR MaLR 1 141 -307 3 1803 278 296 128 40 chrX 159654794 159654942 -6995354 + MLT1J2 LTR MaLR 284 444 0 3 1803 209 159 0 22 chrX 159655585 159655630 -6994666 + A-rich Low_complexity Low_complexity 4 47 0 3 1803 290 245 100 58 chrX 159655749 159655948 -6994348 - BLACKJACK DNA AcHobo 0 2944 2736 3 1803 873 246 16 5 chrX 159655989 159656009 -6994287 - B3A SINE B2 -11 187 167 3 1803 312 27 0 0 chrX 159656009 159656046 -6994250 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1803 873 246 16 5 chrX 159656046 159656209 -6994087 - B3A SINE B2 -32 166 2 3 1803 327 274 47 0 chrX 159656312 159656418 -6993878 + MTE2a LTR MaLR 10 120 -299 3 1803 5272 78 3 2 chrX 159656418 159657306 -6992990 - L1VL4 LINE L1 -1975 1584 695 3 1803 34691 4 0 0 chrX 159657313 159661840 -6988456 - L1Md_A LINE L1 -2 6580 2054 3 1803 1858 241 30 26 chrX 159661839 159662342 -6987954 - L1VL4 LINE L1 -5594 708 204 3 1803 1032 239 65 62 chrX 159662346 159662636 -6987660 + MTE2a LTR MaLR 72 362 -17 3 1803 470 211 67 0 chrX 159663379 159663469 -6986827 - RSINE1 SINE B4 -34 131 36 3 1803 246 171 0 0 chrX 159663447 159663488 -6986808 + MTE2a LTR MaLR 344 384 0 3 1803 23 33 0 0 chrX 159663588 159663618 -6986678 + AT_rich Low_complexity Low_complexity 1 30 0 3 1803 813 223 67 29 chrX 159663627 159663835 -6986461 - B3 SINE B2 0 216 1 3 1803 391 282 145 36 chrX 159663976 159664197 -6986099 - MLT1J LTR MaLR -31 481 237 3 1803 7122 221 83 21 chrX 159664281 159664922 -6985374 + Lx6 LINE L1 5560 6269 -1191 3 1803 3556 33 5 10 chrX 159664922 159665320 -6984976 + MTA_Mm LTR MaLR 1 396 0 3 1803 7122 220 87 21 chrX 159665320 159665952 -6984344 + Lx6 LINE L1 6270 6910 -550 3 1803 378 0 0 0 chrX 159665952 159665994 -6984302 + (GA)n Simple_repeat Simple_repeat 2 43 0 3 1803 7122 208 98 24 chrX 159665994 159666480 -6983816 + Lx6 LINE L1 6911 7695 -1 3 1803 522 83 0 0 chrX 159666507 159666579 -6983717 + (GGA)n Simple_repeat Simple_repeat 1 72 0 3 1803 251 238 49 24 chrX 159666582 159666664 -6983632 - MLT1J LTR MaLR -350 260 177 3 1803 335 308 46 18 chrX 159666759 159666868 -6983428 - BLACKJACK DNA AcHobo -2698 246 135 3 1803 1503 222 90 44 chrX 159667705 159668095 -6982201 + MTD LTR MaLR 10 417 -2 4 1803 265 310 0 15 chrX 159668102 159668185 -6982111 - MER33 DNA MER1_type -104 105 1 4 1803 907 238 195 0 chrX 159668365 159668596 -6981700 + B4 SINE B4 5 280 -12 4 1803 183 286 76 25 chrX 159668736 159668815 -6981481 - MIRc SINE MIR -126 142 60 4 1803 211 259 37 0 chrX 159668831 159668885 -6981411 - MIRm SINE MIR -3 273 218 4 1803 478 262 50 74 chrX 159669318 159669520 -6980776 + RMER30 DNA MER1_type 5 201 -1 4 1803 534 273 116 28 chrX 159669702 159669883 -6980413 + ID_B1 SINE B4 18 214 -10 4 1803 324 0 0 0 chrX 159669889 159669925 -6980371 + (TAA)n Simple_repeat Simple_repeat 3 38 0 4 1803 70 59 0 0 chrX 159669931 159670050 -6980246 + AT_rich Low_complexity Low_complexity 1 119 0 4 1803 230 314 0 41 chrX 159670534 159670607 -6979689 + MER5A1 DNA MER1_type 42 111 -55 4 1803 336 206 29 58 chrX 159670634 159670716 -6979580 - B4A SINE B4 -3 289 207 4 1803 2664 146 85 64 chrX 159670716 159671234 -6979062 - RLTR24 LTR ERV1 0 529 1 4 1803 336 206 29 58 chrX 159671234 159671254 -6979042 - B4A SINE B4 -86 206 190 4 1803 246 312 68 20 chrX 159671471 159671618 -6978678 + RMER15 LTR ERVL 330 483 -92 4 1803 648 286 87 12 chrX 159671687 159671860 -6978436 - B4A SINE B4 -106 186 1 4 1803 1098 170 92 0 chrX 159672381 159672587 -6977709 - URR1B DNA MER1_type 0 225 1 4 1803 755 346 39 63 chrX 159672628 159673038 -6977258 - MT2A LTR ERVL -72 461 62 4 1803 366 357 19 31 chrX 159673435 159673594 -6976702 + Tigger8 DNA MER2_type 31 187 -479 4 1803 595 89 10 0 chrX 159673782 159673880 -6976416 - B2_Mm2 SINE B2 -112 104 3 4 1803 653 232 44 25 chrX 159673983 159674142 -6976154 - RSINE1 SINE B4 -2 163 2 4 1803 257 333 0 14 chrX 159674705 159674778 -6975518 + MIR SINE MIR 69 140 -68 4 1803 455 297 75 24 chrX 159674864 159675119 -6975177 - Helitron1Nb_Mam RC Helitron -28 1088 767 4 1803 310 353 35 75 chrX 159675322 159675521 -6974775 + LTR40b LTR ERVL 93 283 -179 4 1803 1125 76 0 0 chrX 159675972 159676129 -6974167 + (TCTCCC)n Simple_repeat Simple_repeat 6 162 0 4 1803 1177 69 0 0 chrX 159676129 159676274 -6974022 - B1_Mm SINE Alu -2 145 1 4 1803 354 292 22 0 chrX 159676375 159676464 -6973832 + PB1D10 SINE Alu 1 91 -26 4 1803 846 221 5 32 chrX 159676665 159676852 -6973444 - B3A SINE B2 -16 182 1 4 1803 198 0 0 0 chrX 159676871 159676893 -6973403 + (TTTAA)n Simple_repeat Simple_repeat 3 24 0 4 1803 10435 115 9 48 chrX 159676893 159679488 -6970808 - L1_Mus1 LINE L1 -2 6565 4086 4 1803 360 289 46 31 chrX 159679491 159679687 -6970609 - MusHAL1 LINE L1 -3049 305 107 4 1803 697 315 27 9 chrX 159680455 159680679 -6969617 + MIR SINE MIR 35 262 0 4 1803 276 312 72 34 chrX 159681075 159681284 -6969012 - RLTR42-int LTR ERVK -4142 1380 1164 4 1803 216 67 0 0 chrX 159682016 159682046 -6968250 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1803 673 257 14 0 chrX 159682048 159682196 -6968100 - RSINE1 SINE B4 -13 152 3 4 1803 853 334 55 76 chrX 159682273 159682837 -6967459 - MLT1F2 LTR MaLR 0 560 9 4 1803 1423 147 4 9 chrX 159683462 159683689 -6966607 - URR1A DNA MER1_type 0 226 1 4 1803 225 270 106 41 chrX 159684158 159684328 -6965968 - Lx8 LINE L1 -11 7462 7282 4 1803 275 299 50 19 chrX 159684559 159684672 -6965624 - MIR SINE MIR -91 117 7 4 1803 195 328 78 39 chrX 159684724 159684930 -6965366 - MIR SINE MIR -7 255 42 4 1803 204 40 0 0 chrX 159685348 159685373 -6964923 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 1803 402 375 52 45 chrX 159685387 159685677 -6964619 - B4 SINE B4 0 292 1 4 1803 527 310 38 92 chrX 159685677 159685914 -6964382 - B4 SINE B4 -66 226 3 4 1803 412 242 10 31 chrX 159686063 159686161 -6964135 + MER45A DNA Tip100 83 178 0 4 1803 6530 165 31 23 chrX 159686457 159687657 -6962639 + Lx5 LINE L1 5839 7047 -3 4 1803 1302 268 25 7 chrX 159688173 159688455 -6961841 + B4A SINE B4 6 292 0 4 1803 636 98 0 0 chrX 159688655 159688757 -6961539 + (CA)n Simple_repeat Simple_repeat 1 102 0 4 1803 690 318 56 112 chrX 159688934 159689108 -6961188 + RMER15 LTR ERVL 64 225 -350 4 1803 977 110 0 33 chrX 159689108 159689258 -6961038 + B1_Mur3 SINE Alu 5 149 0 4 1803 690 318 56 112 chrX 159689258 159689564 -6960732 + RMER15 LTR ERVL 226 531 -44 4 1803 387 0 0 0 chrX 159689564 159689607 -6960689 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1803 690 318 56 112 chrX 159689607 159689663 -6960633 + RMER15 LTR ERVL 532 571 -4 4 1803 432 260 0 77 chrX 159690663 159690767 -6959529 - ID_B1 SINE B4 -7 217 122 4 1803 546 239 116 28 chrX 159692117 159692298 -6957998 - B3A SINE B2 0 198 2 4 1803 269 279 0 0 chrX 159692359 159692427 -6957869 - ID4 SINE ID -14 69 2 4 1803 237 255 37 19 chrX 159692599 159692707 -6957589 - L1MB1 LINE L1 -35 6133 6024 4 1803 331 283 76 0 chrX 159692729 159692821 -6957475 - RSINE1 SINE B4 -2 163 65 4 1803 1070 286 69 0 chrX 159692847 159693137 -6957159 + MTD LTR MaLR 52 361 -58 4 1803 650 234 99 47 chrX 159693209 159693648 -6956648 - L1MB1 LINE L1 -718 5476 5018 4 1803 236 83 0 0 chrX 159693682 159693718 -6956578 + Lx8 LINE L1 7225 7260 -213 4 1803 232 190 35 0 chrX 159693745 159693803 -6956493 - L1MB1 LINE L1 -1544 4596 4537 4 1803 925 328 26 18 chrX 159693854 159694127 -6956169 - B4 SINE B4 -2 290 16 4 1803 436 268 73 56 chrX 159694143 159694376 -6955920 - L1MB1 LINE L1 -1621 4519 4283 4 1803 227 396 34 63 chrX 159694435 159694640 -6955656 - MLT1N2 LTR MaLR -261 301 103 4 1803 246 202 87 52 chrX 159694999 159695114 -6955182 - Lx8 LINE L1 -2 7471 7353 4 1803 474 137 0 0 chrX 159695123 159695218 -6955078 + (TC)n Simple_repeat Simple_repeat 2 96 0 4 1803 374 0 22 0 chrX 159695218 159695264 -6955032 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1803 21 0 0 0 chrX 159695557 159695578 -6954718 + AT_rich Low_complexity Low_complexity 1 21 0 4 1803 549 80 0 0 chrX 159695594 159695669 -6954627 + (TG)n Simple_repeat Simple_repeat 1 75 0 4 1803 1628 196 86 56 chrX 159695692 159696066 -6954230 + RLTR41 LTR ERV1 62 446 0 4 1803 392 319 6 60 chrX 159696066 159696233 -6954063 - RSINE1 SINE B4 -6 159 2 4 1803 216 0 0 0 chrX 159696235 159696259 -6954037 + (TTG)n Simple_repeat Simple_repeat 2 25 0 4 1803 570 41 0 0 chrX 159696919 159696992 -6953304 + (TG)n Simple_repeat Simple_repeat 1 73 0 4 1803 646 278 15 0 chrX 159697012 159697145 -6953151 - RSINE1 SINE B4 -29 136 2 4 1803 454 181 85 38 chrX 159697288 159697407 -6952889 + PB1D9 SINE Alu 6 121 -28 4 1803 411 242 0 42 chrX 159697495 159697590 -6952706 + MER5A DNA MER1_type 2 92 -97 4 1803 635 231 39 0 chrX 159697590 159697746 -6952550 + Lx8 LINE L1 6892 7053 -420 4 1803 902 179 15 66 chrX 159697750 159697887 -6952409 - RLTR25A LTR ERVK 0 1103 968 4 1803 414 0 0 0 chrX 159697887 159697933 -6952363 + (TC)n Simple_repeat Simple_repeat 2 47 0 4 1803 282 73 0 0 chrX 159697933 159697973 -6952323 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1803 902 179 15 66 chrX 159697973 159698031 -6952265 - RLTR25A LTR ERVK -136 967 918 4 1803 4672 153 77 38 chrX 159698165 159699077 -6951219 - RLTR25A LTR ERVK -156 947 1 4 1803 464 306 82 10 chrX 159699098 159699293 -6951003 + Lx8 LINE L1 7068 7276 -197 4 1803 245 258 46 46 chrX 159699297 159699362 -6950934 + RMER15 LTR ERVL 403 467 -108 4 1803 241 325 12 0 chrX 159699563 159699646 -6950650 + MER5A DNA MER1_type 61 144 -45 4 1803 1256 34 0 0 chrX 159699678 159699825 -6950471 + B1_Mm SINE Alu 1 147 0 4 1803 652 250 0 0 chrX 159700134 159700258 -6950038 - ID_B1 SINE B4 -12 212 89 4 1803 1819 168 31 154 chrX 159700500 159700979 -6949317 - RLTR23 LTR ERV1 0 430 11 4 1803 1234 294 66 15 chrX 159701051 159701461 -6948835 + MLT1C LTR MaLR 2 432 -35 4 1803 1149 228 60 103 chrX 159702022 159702438 -6947858 + RMER10B LTR ERVL 1 398 0 4 1803 7890 33 1 5 chrX 159702557 159703736 -6946560 - L1Md_F2 LINE L1 -2 6580 5409 4 1803 4190 62 2 36 chrX 159703893 159704280 -6946016 + LTRIS2 LTR ERV1 1 374 -190 4 1803 3114 51 3 3 chrX 159704280 159704670 -6945626 + L1Md_F2 LINE L1 6192 6581 -1 4 1803 4190 62 2 36 chrX 159704670 159704866 -6945430 + LTRIS2 LTR ERV1 375 564 0 4 1803 524 229 0 0 chrX 159704867 159704963 -6945333 + ID_B1 SINE B4 127 222 -2 4 1803 222 240 0 74 chrX 159704965 159705073 -6945223 + A-rich Low_complexity Low_complexity 4 103 0 4 1803 588 297 0 0 chrX 159705086 159705224 -6945072 + ID_B1 SINE B4 86 223 -1 4 1803 2677 192 96 111 chrX 159705301 159706217 -6944079 + RLTR13D6 LTR ERVK 1 902 0 4 1803 237 217 0 0 chrX 159706225 159706271 -6944025 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1803 392 317 57 51 chrX 159706643 159706859 -6943437 - L2c LINE L2 0 3387 3131 4 1803 606 82 0 0 chrX 159707087 159707172 -6943124 + (TTCC)n Simple_repeat Simple_repeat 4 88 0 4 1803 257 212 0 43 chrX 159707352 159707421 -6942875 - RLTR15 LTR ERVK -214 145 80 4 1803 315 0 0 0 chrX 159707588 159707623 -6942673 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 4 1803 1163 96 0 0 chrX 159707623 159707779 -6942517 - B2_Mm2 SINE B2 -38 157 2 4 1803 243 295 66 109 chrX 159707803 159707940 -6942356 - B3A SINE B2 0 198 68 4 1803 379 298 102 32 chrX 159708069 159708256 -6942040 + LTR33 LTR ERVL 12 211 -304 4 1803 1751 129 112 3 chrX 159708716 159709027 -6941269 + IAPLTR4 LTR ERVK 1 345 0 4 1803 432 377 115 23 chrX 159709264 159709777 -6940519 - L3 LINE CR1 -875 3614 3055 4 1803 232 327 17 46 chrX 159709898 159709963 -6940333 + YREP_Mm Unknown Unknown 124 291 -1521 4 1803 586 213 19 0 chrX 159709963 159710071 -6940225 - ID_B1 SINE B4 -8 216 107 4 1803 628 227 0 8 chrX 159710085 159710205 -6940091 + RLTR18B LTR ERVK 9 127 -385 4 1803 901 153 0 56 chrX 159710210 159710390 -6939906 - Lx7 LINE L1 -472 7224 7055 4 1803 205 308 0 0 chrX 159711211 159711276 -6939020 + (TTAGGC)n Simple_repeat Simple_repeat 3 67 0 4 1803 707 340 42 0 chrX 159711647 159711862 -6938434 + MER58A DNA MER1_type 1 224 0 5 1803 481 319 6 0 chrX 159711882 159712051 -6938245 - MER33 DNA MER1_type -145 179 10 5 1803 827 269 20 25 chrX 159712326 159712479 -6937817 + B3A SINE B2 2 157 -41 5 1803 312 27 0 0 chrX 159712479 159712516 -6937780 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1803 827 269 20 25 chrX 159712516 159712560 -6937736 + B3A SINE B2 158 198 0 5 1803 2154 162 6 8 chrX 159712665 159713031 -6937265 - ORR1B2 LTR MaLR 0 367 3 5 1803 680 348 14 10 chrX 159713203 159713412 -6936884 - B4A SINE B4 0 292 83 5 1803 647 261 32 49 chrX 159714012 159714197 -6936099 - B3A SINE B2 -16 182 1 5 1803 609 14 0 0 chrX 159714204 159714274 -6936022 + (TTCC)n Simple_repeat Simple_repeat 2 71 0 5 1803 1241 78 6 0 chrX 159714274 159714453 -6935843 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 1803 467 289 7 7 chrX 159714453 159714596 -6935700 - B1F SINE Alu -2 147 5 5 1803 354 390 16 51 chrX 159714667 159714978 -6935318 + L1MC4a LINE L1 5533 5832 -2050 5 1803 483 292 7 46 chrX 159714978 159715129 -6935167 - RSINE1 SINE B4 -17 148 4 5 1803 25 0 0 0 chrX 159715313 159715338 -6934958 + AT_rich Low_complexity Low_complexity 1 25 0 5 1803 1632 29 5 9 chrX 159715591 159715801 -6934495 + L1Md_F3 LINE L1 6374 6582 -2 5 1803 4413 118 11 1 chrX 159715815 159716469 -6933827 - Lx3A LINE L1 -5 6976 6317 5 1803 469 337 21 47 chrX 159716540 159716733 -6933563 - MER115 DNA Tip100 -11 682 495 5 1803 2560 196 152 13 chrX 159716896 159717506 -6932790 - RMER19A LTR ERVK 0 737 43 5 1803 16197 9 0 0 chrX 159717506 159720109 -6930187 - L1Md_A LINE L1 -3 6579 3976 5 1803 721 186 14 41 chrX 159720115 159720173 -6930123 - RMER19A LTR ERVK -595 142 88 5 1803 1195 48 0 7 chrX 159720173 159720321 -6929975 - B1_Mus2 SINE Alu 0 147 1 5 1803 721 186 14 41 chrX 159720321 159720408 -6929888 - RMER19A LTR ERVK -650 87 1 5 1803 270 0 0 0 chrX 159720504 159720534 -6929762 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 1803 647 246 16 0 chrX 159720535 159720657 -6929639 - B3A SINE B2 -73 125 2 5 1803 271 305 105 39 chrX 159720682 159720715 -6929581 - B3A SINE B2 -1 197 5 5 1803 576 304 81 0 chrX 159720715 159720863 -6929433 - RSINE1 SINE B4 0 165 6 5 1803 398 336 70 30 chrX 159722141 159722371 -6927925 - L1M4 LINE L1 -1407 4739 4501 5 1803 2472 53 81 0 chrX 159722419 159722739 -6927557 - ORR1A1 LTR MaLR 0 346 1 5 1803 13737 52 12 19 chrX 159722739 159724545 -6925751 - ORR1A1-int LTR MaLR 0 1792 1 5 1803 2489 56 75 0 chrX 159724545 159724867 -6925429 - ORR1A1 LTR MaLR 0 346 1 5 1803 402 205 13 0 chrX 159725400 159725478 -6924818 + ID4 SINE ID 2 80 -3 5 1803 916 253 117 35 chrX 159725730 159726013 -6924283 + MTD LTR MaLR 106 411 -8 5 1803 518 298 32 24 chrX 159726056 159726180 -6924116 - RSINE1 SINE B4 -4 161 37 5 1803 26 0 0 0 chrX 159726648 159726674 -6923622 + AT_rich Low_complexity Low_complexity 1 26 0 5 1803 4828 77 10 6 chrX 159726674 159727353 -6922943 - Lx LINE L1 -6 6648 5967 5 1803 747 0 0 0 chrX 159727353 159727436 -6922860 + (TTC)n Simple_repeat Simple_repeat 2 84 0 5 1803 789 77 0 0 chrX 159727438 159727542 -6922754 - B1_Mus2 SINE Alu -4 143 40 5 1803 6316 123 23 10 chrX 159727542 159728767 -6921529 - Lx LINE L1 -691 5963 4731 5 1803 493 303 0 44 chrX 159728797 159728956 -6921340 - RSINE1 SINE B4 -6 159 8 5 1803 333 0 0 0 chrX 159729017 159729054 -6921242 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1803 713 306 78 58 chrX 159729100 159729357 -6920939 - B4 SINE B4 -27 265 4 5 1803 222 330 33 43 chrX 159729570 159729662 -6920634 + MER5B DNA MER1_type 8 98 -80 5 1803 1100 90 7 0 chrX 159730501 159730646 -6919650 - B1_Mus2 SINE Alu -1 146 1 5 1803 1033 166 111 0 chrX 159730828 159731027 -6919269 + URR1B DNA MER1_type 5 225 0 5 1803 267 291 108 63 chrX 159731450 159731608 -6918688 - L1ME3 LINE L1 -9 6153 5989 5 1803 264 290 23 4 chrX 159731691 159731806 -6918490 + MIRc SINE MIR 65 183 -25 5 1803 2096 133 31 26 chrX 159732233 159732612 -6917684 + ORR1B1 LTR MaLR 7 382 -12 5 1803 347 331 47 0 chrX 159733164 159733291 -6917005 - MLT1A0 LTR MaLR -4 361 229 5 1803 1436 246 159 55 chrX 159733387 159733790 -6916506 - RLTR40 LTR ERVK -83 734 302 5 1803 437 0 19 0 chrX 159733790 159733843 -6916453 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1803 477 0 0 0 chrX 159733843 159733895 -6916401 + (GA)n Simple_repeat Simple_repeat 2 54 0 5 1803 1436 246 159 55 chrX 159733895 159734139 -6916157 - RLTR40 LTR ERVK -516 301 20 5 1803 616 268 14 0 chrX 159734172 159734310 -6915986 - MLT1A0 LTR MaLR -225 140 1 5 1803 366 23 0 0 chrX 159734385 159734428 -6915868 + (TTA)n Simple_repeat Simple_repeat 2 44 0 5 1803 434 340 24 30 chrX 159734430 159734594 -6915702 - RSINE1 SINE B4 0 165 3 5 1803 204 361 42 0 chrX 159734836 159734908 -6915388 + MIRc SINE MIR 42 116 -152 5 1803 1136 323 95 18 chrX 159735223 159735790 -6914506 - LTR33C LTR ERVL -18 611 1 5 1803 1245 172 5 5 chrX 159736136 159736352 -6913944 - B3 SINE B2 0 216 1 5 1803 660 216 45 0 chrX 159737106 159737240 -6913056 + B1_Mur1 SINE Alu 10 149 0 5 1803 381 43 0 0 chrX 159737491 159737538 -6912758 + (CAAG)n Simple_repeat Simple_repeat 1 47 0 5 1803 193 98 0 47 chrX 159737610 159737653 -6912643 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1803 403 295 45 0 chrX 159738355 159738467 -6911829 - B1F SINE Alu -32 117 1 5 1803 838 248 0 0 chrX 159738787 159738944 -6911352 + RSINE1 SINE B4 3 159 -6 5 1803 318 345 54 65 chrX 159739519 159739705 -6910591 + LTR16A1 LTR ERVL 179 364 -87 5 1803 2973 62 26 8 chrX 159739748 159740137 -6910159 + MTA_Mm LTR MaLR 1 396 0 5 1803 795 235 5 88 chrX 159740171 159740386 -6909910 - B3A SINE B2 0 198 2 5 1803 252 161 54 0 chrX 159740992 159741048 -6909248 + B4A SINE B4 1 59 -233 5 1803 425 257 0 71 chrX 159741316 159741429 -6908867 + B3A SINE B2 4 108 -90 5 1803 480 111 0 0 chrX 159741474 159741546 -6908750 + (TA)n Simple_repeat Simple_repeat 1 72 0 5 1803 414 0 0 0 chrX 159742326 159742372 -6907924 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 1803 2789 61 0 0 chrX 159742510 159742856 -6907440 + ORR1A1 LTR MaLR 1 346 0 5 1803 493 88 25 0 chrX 159742998 159743078 -6907218 + (TC)n Simple_repeat Simple_repeat 1 82 0 5 1803 299 182 0 35 chrX 159743078 159743135 -6907161 + C-rich Low_complexity Low_complexity 3 57 0 5 1803 999 261 4 43 chrX 159743491 159743662 -6906634 + ID_B1 SINE B4 1 168 -56 5 1803 1956 142 20 0 chrX 159743662 159743965 -6906331 + RLTR27 LTR ERVK 1 309 0 5 1803 999 261 4 43 chrX 159743965 159744025 -6906271 + ID_B1 SINE B4 169 223 -1 5 1803 216 315 32 11 chrX 159744056 159744149 -6906147 + (CATATA)n Simple_repeat Simple_repeat 2 96 0 5 1803 546 16 0 0 chrX 159744678 159744741 -6905555 + (TC)n Simple_repeat Simple_repeat 2 64 0 5 1803 2023 106 3 0 chrX 159745017 159745299 -6904997 - MTC LTR MaLR -138 283 1 5 1803 864 204 102 0 chrX 159745329 159745525 -6904771 - B3 SINE B2 0 216 1 5 1803 1929 66 20 71 chrX 159745642 159745937 -6904359 + L1_Mus2 LINE L1 6283 6562 -4 5 1803 398 272 126 26 chrX 159746029 159746264 -6904032 + L1MA4 LINE L1 5749 5971 -1673 5 1803 216 0 0 0 chrX 159746551 159746575 -6903721 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1803 339 119 0 0 chrX 159746576 159746643 -6903653 + (CAGA)n Simple_repeat Simple_repeat 2 68 0 5 1803 320 264 75 0 chrX 159746663 159746769 -6903527 + MER53 DNA hAT 77 190 -3 5 1803 1022 248 9 37 chrX 159747048 159747079 -6903217 + B3 SINE B2 2 28 -188 5 1803 1702 145 172 31 chrX 159747079 159747428 -6902868 + RMER10B LTR ERVL 1 398 0 5 1803 1022 248 9 37 chrX 159747428 159747610 -6902686 + B3 SINE B2 29 209 -7 5 1803 242 298 175 16 chrX 159748193 159748319 -6901977 + RLTR18 LTR ERVK 1 146 -366 5 1803 355 251 49 190 chrX 159748330 159748556 -6901740 + RLTR18 LTR ERVK 211 404 -212 5 1803 1954 31 4 58 chrX 159748580 159748856 -6901440 - LTRIS_Mm LTR ERV1 -77 405 145 5 1803 329 302 53 59 chrX 159748880 159749049 -6901247 + RLTR18 LTR ERVK 436 603 -13 5 1803 646 198 8 32 chrX 159749055 159749180 -6901116 - B1_Mur3 SINE Alu -27 122 1 5 1803 498 108 0 0 chrX 159749418 159749492 -6900804 + (GA)n Simple_repeat Simple_repeat 2 75 0 5 1803 239 291 148 144 chrX 159749788 159750065 -6900231 - B4A SINE B4 0 292 15 5 1803 1539 237 14 72 chrX 159750344 159750725 -6899571 + ORR1E LTR MaLR 1 421 0 5 1803 619 140 76 7 chrX 159750795 159750939 -6899357 - Lx9 LINE L1 -25 7619 7466 5 1803 198 0 0 0 chrX 159751143 159751165 -6899131 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1803 1391 77 16 0 chrX 159751887 159752070 -6898226 + B2_Mm2 SINE B2 1 186 -9 5 1803 594 262 32 32 chrX 159753426 159753615 -6896681 + RMER15 LTR ERVL 336 524 -51 5 1803 1382 158 107 27 chrX 159753821 159754158 -6896138 - Lx9 LINE L1 0 7644 7281 5 1803 599 238 146 6 chrX 159754449 159754614 -6895682 - B3 SINE B2 0 216 29 5 1803 435 16 0 0 chrX 159754614 159754676 -6895620 - L1Md_F2 LINE L1 0 6582 6521 5 1803 22 35 0 0 chrX 159754729 159754758 -6895538 + AT_rich Low_complexity Low_complexity 1 29 0 5 1803 1484 169 148 0 chrX 159754902 159754938 -6895358 - MT2A LTR ERVL -8 525 490 5 1803 558 43 0 0 chrX 159754938 159755007 -6895289 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 1803 1484 169 148 0 chrX 159755007 159755248 -6895048 - MT2A LTR ERVL -44 489 209 5 1803 633 211 86 0 chrX 159755369 159755497 -6894799 - B1_Mur1 SINE Alu -10 139 1 5 1803 806 266 82 39 chrX 159755637 159755844 -6894452 + B3A SINE B2 1 216 0 5 1803 200 353 38 29 chrX 159756098 159756203 -6894093 + L2a LINE L2 3297 3402 -24 5 1803 1195 239 15 15 chrX 159756208 159756467 -6893829 + MTEb LTR MaLR 121 379 0 5 1803 327 194 16 0 chrX 159756840 159756902 -6893394 + MER20 DNA MER1_type 4 66 -153 5 1803 378 0 0 0 chrX 159756907 159756949 -6893347 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1803 950 242 41 151 chrX 159758216 159758611 -6891685 + MTD LTR MaLR 6 324 -55 6 1803 200 192 115 0 chrX 159758652 159758704 -6891592 - MER91C DNA Tip100 -57 83 26 6 1803 437 34 17 0 chrX 159758829 159758888 -6891408 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 6 1803 691 190 23 0 chrX 159758902 159759076 -6891220 + (TATG)n Simple_repeat Simple_repeat 2 179 0 6 1803 405 0 0 0 chrX 159759244 159759289 -6891007 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 6 1803 768 69 0 0 chrX 159759305 159759406 -6890890 - B2_Mm2 SINE B2 -94 101 1 6 1803 392 237 0 0 chrX 159760229 159760305 -6889991 + B4A SINE B4 1 76 -216 6 1803 354 61 0 0 chrX 159760703 159760752 -6889544 + (TATG)n Simple_repeat Simple_repeat 4 52 0 6 1803 210 139 0 0 chrX 159760759 159760795 -6889501 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1803 555 314 100 19 chrX 159760816 159761085 -6889211 - B4A SINE B4 0 292 2 6 1803 524 282 102 15 chrX 159761090 159761295 -6889001 - ID_B1 SINE B4 -1 223 1 6 1803 207 314 40 81 chrX 159761301 159761450 -6888846 + L2c LINE L2 3240 3382 -5 6 1803 3000 64 2 15 chrX 159761512 159761911 -6888385 + L1Md_F2 LINE L1 6177 6570 -12 6 1803 3417 48 0 2 chrX 159761923 159762365 -6887931 + L1Md_F3 LINE L1 5146 5586 -297 6 1803 7858 40 22 3 chrX 159762365 159763331 -6886965 + L1Md_F3 LINE L1 5587 6570 -14 6 1803 2061 138 54 14 chrX 159765394 159765747 -6884549 + ORR1B2 LTR MaLR 1 367 0 6 1803 922 258 9 0 chrX 159765935 159766148 -6884148 - ID_B1 SINE B4 -9 215 1 6 1803 329 298 18 88 chrX 159766860 159766974 -6883322 + MTD LTR MaLR 140 245 -174 6 1803 634 279 140 34 chrX 159766972 159767325 -6882971 - Kanga1a DNA Tc2 -230 524 132 6 1803 531 345 51 0 chrX 159767328 159767525 -6882771 + MLT1F2 LTR MaLR 3 209 -351 6 1803 603 262 28 0 chrX 159767571 159767716 -6882580 - B1_Mur1 SINE Alu 0 149 1 6 1803 597 64 0 0 chrX 159767730 159767808 -6882488 + (GGAA)n Simple_repeat Simple_repeat 1 78 0 6 1803 768 329 16 105 chrX 159767809 159768115 -6882181 + MLT1F2 LTR MaLR 276 554 -6 6 1803 449 298 8 24 chrX 159768115 159768239 -6882057 - Kanga1a DNA Tc2 -617 137 14 6 1803 33 0 0 0 chrX 159768594 159768627 -6881669 + AT_rich Low_complexity Low_complexity 1 33 0 6 1803 563 256 83 0 chrX 159768655 159768776 -6881520 - RSINE1 SINE B4 -31 134 4 6 1803 253 154 18 55 chrX 159768786 159768841 -6881455 + CT-rich Low_complexity Low_complexity 6 58 0 6 1803 786 255 76 0 chrX 159768863 159769047 -6881249 - ID_B1 SINE B4 -25 199 2 6 1803 1099 242 35 38 chrX 159769148 159769436 -6880860 - B4A SINE B4 -4 288 2 6 1803 384 369 54 27 chrX 159769853 159770076 -6880220 - MIRb SINE MIR -36 232 4 6 1803 24 32 0 0 chrX 159770703 159770734 -6879562 + AT_rich Low_complexity Low_complexity 1 31 0 6 1803 681 257 21 0 chrX 159772111 159772251 -6878045 - B3A SINE B2 -55 143 1 6 1803 726 259 69 21 chrX 159772327 159772516 -6877780 + B3A SINE B2 1 198 0 6 1803 450 53 0 0 chrX 159772637 159772694 -6877602 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1803 870 286 32 16 chrX 159772702 159772954 -6877342 - B4A SINE B4 -35 257 2 6 1803 891 202 42 52 chrX 159773775 159773968 -6876328 - B3 SINE B2 -5 211 21 6 1803 1848 274 43 17 chrX 159774402 159775406 -6874890 + Lx5 LINE L1 6117 7050 0 6 1803 384 297 10 10 chrX 159775723 159775825 -6874471 + MLT1A1 LTR MaLR 37 138 -270 6 1803 321 202 173 9 chrX 159776172 159776282 -6874014 + L1MA5 LINE L1 5340 5523 -777 6 1803 453 180 0 0 chrX 159776289 159776378 -6873918 + (TA)n Simple_repeat Simple_repeat 2 90 0 6 1803 324 0 0 0 chrX 159776381 159776417 -6873879 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 225 736 274 98 11 chrX 159776423 159776770 -6873526 + L1MA5 LINE L1 5547 5923 -377 6 1804 906 245 31 10 chrX 159777304 159777498 -6872798 - B3A SINE B2 0 198 1 6 1804 279 0 0 0 chrX 159777508 159777539 -6872757 + (T)n Simple_repeat Simple_repeat 1 31 0 6 1804 270 0 0 0 chrX 159778169 159778199 -6872097 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1804 1179 63 28 0 chrX 159778199 159778341 -6871955 - B1_Mus1 SINE Alu 0 148 3 6 1804 2541 174 19 2 chrX 159778663 159779077 -6871219 - MTC LTR MaLR 0 421 1 6 1804 374 289 202 59 chrX 159779175 159779532 -6870764 + MLT1A1 LTR MaLR 1 408 0 6 1804 2900 68 90 0 chrX 159779702 159780069 -6870227 - MTB LTR MaLR 0 400 1 6 1804 261 0 0 0 chrX 159780468 159780497 -6869799 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1804 522 0 0 0 chrX 159780497 159780554 -6869742 + (GA)n Simple_repeat Simple_repeat 2 59 0 6 1804 1899 335 52 80 chrX 159780605 159780767 -6869529 + MLT-int LTR MaLR 63 205 -1530 6 1804 869 290 9 5 chrX 159780767 159780985 -6869311 + ID_B1 SINE B4 3 221 -3 6 1804 1899 335 52 80 chrX 159780985 159781889 -6868407 + MLT-int LTR MaLR 206 1100 -635 6 1804 1873 152 159 43 chrX 159782125 159782892 -6867404 + RMER19B LTR ERVK 1 864 -38 6 1804 3747 34 87 5 chrX 159782892 159783331 -6866965 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1804 1873 163 82 36 chrX 159783331 159783360 -6866936 + RMER19B LTR ERVK 865 887 -15 6 1804 806 60 0 20 chrX 159783360 159783451 -6866845 + L1_Mm LINE L1 5496 5586 -297 6 1804 8725 42 3 0 chrX 159783451 159784444 -6865852 + L1Md_F2 LINE L1 5587 6582 0 6 1804 187 128 85 0 chrX 159784750 159784797 -6865499 + CT-rich Low_complexity Low_complexity 3 53 0 6 1804 278 284 16 72 chrX 159784865 159784990 -6865306 + MLT-int LTR MaLR 1616 1733 -2 6 1804 583 262 46 46 chrX 159785182 159785334 -6864962 + B3 SINE B2 33 184 -32 6 1804 281 301 93 29 chrX 159785399 159785539 -6864757 + MLT1A1 LTR MaLR 248 396 -12 6 1804 439 321 130 24 chrX 159786281 159786406 -6863890 - Tigger13a DNA MER2_type -269 502 365 6 1804 738 0 0 0 chrX 159786406 159786488 -6863808 + (GAA)n Simple_repeat Simple_repeat 1 82 0 6 1804 439 321 130 24 chrX 159786488 159786700 -6863596 - Tigger13a DNA MER2_type -407 364 130 6 1804 1744 230 76 6 chrX 159786816 159787170 -6863126 + MTE2b LTR MaLR 1 379 0 6 1804 2591 102 3 37 chrX 159787825 159788200 -6862096 - Lx LINE L1 -7 6647 6286 6 1804 1318 64 0 6 chrX 159788236 159788409 -6861887 - L1_Mus2 LINE L1 -1 6565 6394 6 1804 845 232 43 10 chrX 159788692 159788901 -6861395 + RMER1C Other Other 29 244 -1098 6 1804 282 270 0 0 chrX 159788901 159788964 -6861332 + (CATA)n Simple_repeat Simple_repeat 2 64 0 6 1804 300 197 15 15 chrX 159788967 159789034 -6861262 + RMER1C Other Other 226 292 -1050 6 1804 2942 170 73 4 chrX 159789311 159789842 -6860454 + RMER1C Other Other 765 1332 -10 6 1804 712 65 0 0 chrX 159790403 159790496 -6859800 - BC1_Mm scRNA scRNA -59 93 1 6 1804 364 257 77 29 chrX 159790568 159790672 -6859624 - B4A SINE B4 -182 110 2 6 1804 779 259 24 13 chrX 159790704 159790961 -6859335 + L1MA4 LINE L1 5686 5917 -383 6 1804 726 268 40 50 chrX 159791596 159791796 -6858500 - B3A SINE B2 0 198 1 6 1804 24 0 0 0 chrX 159791802 159791826 -6858470 + AT_rich Low_complexity Low_complexity 1 24 0 6 1804 570 229 380 29 chrX 159792363 159792642 -6857654 - MTEb LTR MaLR -2 377 1 6 1804 1469 172 115 99 chrX 159792646 159793021 -6857275 + RLTR11A LTR ERVK 1 381 -147 6 1804 37910 28 3 7 chrX 159793021 159798420 -6851876 + L1Md_T LINE L1 212 5586 -297 6 1804 9013 34 0 0 chrX 159798420 159799416 -6850880 + L1Md_T LINE L1 5587 6582 0 6 1804 598 185 207 0 chrX 159799433 159799568 -6850728 + RLTR11A LTR ERVK 366 528 0 6 1804 663 219 32 67 chrX 159799720 159799889 -6850407 + B3A SINE B2 2 146 -49 6 1804 195 269 31 51 chrX 159800360 159800458 -6849838 - MIRb SINE MIR -70 198 103 6 1804 810 189 82 12 chrX 159800565 159800736 -6849560 + MTEa LTR MaLR 1 183 -196 6 1804 384 77 0 0 chrX 159800747 159800799 -6849497 + (GGA)n Simple_repeat Simple_repeat 2 53 0 6 1804 519 274 98 22 chrX 159800799 159800982 -6849314 + MTEa LTR MaLR 171 367 -12 6 1804 1006 140 25 7 chrX 159801333 159801512 -6848784 - Lx2 LINE L1 -304 6754 6574 6 1804 21 0 0 0 chrX 159801845 159801866 -6848430 + AT_rich Low_complexity Low_complexity 1 21 0 6 1804 4740 97 46 5 chrX 159801866 159802500 -6847796 - Lx2 LINE L1 -1 6996 6337 6 1804 4304 134 83 63 chrX 159802504 159803362 -6846934 - RMER19B LTR ERVK -27 875 1 6 1804 348 302 94 90 chrX 159803669 159803758 -6846538 - L1M4 LINE L1 -2575 3571 3463 6 1804 764 251 37 42 chrX 159803758 159803779 -6846517 - B3A SINE B2 -4 194 177 6 1804 244 0 56 0 chrX 159803779 159803815 -6846481 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1804 764 251 37 42 chrX 159803815 159803984 -6846312 - B3A SINE B2 -22 176 5 6 1804 348 302 94 90 chrX 159803984 159804360 -6845936 - L1M4 LINE L1 -2684 3462 3104 6 1804 297 221 32 85 chrX 159804697 159804791 -6845505 - RSINE1 SINE B4 -29 136 48 6 1804 14701 146 201 14 chrX 159804791 159809937 -6840359 + Lx LINE L1 421 6648 -6 6 1804 310 265 9 117 chrX 159809937 159810048 -6840248 - RSINE1 SINE B4 -62 103 5 6 1804 3758 38 2 7 chrX 159810123 159810588 -6839708 + L1Md_T LINE L1 5160 5587 -296 6 1804 9042 31 0 0 chrX 159810588 159811580 -6838716 + L1Md_T LINE L1 5588 6579 -3 6 1804 321 261 65 0 chrX 159811900 159811982 -6838314 + MLT1A1 LTR MaLR 1 88 -320 6 1804 572 309 48 79 chrX 159811982 159812184 -6838112 + ID_B1 SINE B4 2 203 -21 6 1804 1141 222 199 19 chrX 159812184 159812501 -6837795 - ORR1D1 LTR MaLR 0 374 1 6 1804 572 309 48 79 chrX 159812501 159812526 -6837770 + ID_B1 SINE B4 204 222 -2 6 1804 485 308 64 41 chrX 159812611 159812831 -6837465 + B4A SINE B4 6 230 -62 6 1804 3295 184 67 18 chrX 159812852 159813565 -6836731 - RLTR40 LTR ERVK -19 798 51 6 1804 479 138 11 0 chrX 159813565 159813652 -6836644 + (CA)n Simple_repeat Simple_repeat 1 88 0 6 1804 396 0 0 0 chrX 159813782 159813826 -6836470 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1804 216 293 0 146 chrX 159813928 159814024 -6836272 - L2c LINE L2 -20 3367 3286 6 1804 830 199 122 22 chrX 159814690 159814870 -6835426 + B3 SINE B2 4 201 -15 6 1804 316 85 33 33 chrX 159814871 159814932 -6835364 + (CATA)n Simple_repeat Simple_repeat 4 64 0 6 1804 1030 328 50 34 chrX 159815118 159815500 -6834796 - MLT1F2 LTR MaLR -145 415 28 6 1804 365 158 145 12 chrX 159815589 159815672 -6834624 + B1F SINE Alu 55 148 -1 6 1804 224 177 15 46 chrX 159815710 159815775 -6834521 + (TA)n Simple_repeat Simple_repeat 2 64 0 6 1804 216 0 0 0 chrX 159815848 159815872 -6834424 + (TC)n Simple_repeat Simple_repeat 1 24 0 7 1804 396 0 0 0 chrX 159815872 159815915 -6834381 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1804 357 203 39 39 chrX 159815926 159816003 -6834293 - B1F1 SINE Alu -41 108 32 7 1804 303 273 61 43 chrX 159816003 159816041 -6834255 - ID_B1 SINE B4 -38 186 70 7 1804 530 288 24 0 chrX 159816297 159816422 -6833874 - ID_B1 SINE B4 -96 128 1 7 1804 334 301 60 37 chrX 159816467 159816684 -6833612 + L2b LINE L2 1714 1935 -1484 7 1804 250 250 124 11 chrX 159816734 159816823 -6833473 - MER20 DNA MER1_type 0 219 121 7 1804 295 221 12 38 chrX 159816991 159817071 -6833225 - L1MB4 LINE L1 -8 6172 6095 7 1804 244 360 110 43 chrX 159817076 159817514 -6832782 + L2b LINE L2 2091 2557 -862 7 1804 967 188 6 11 chrX 159817516 159817694 -6832602 + Lx5 LINE L1 6737 6913 -137 7 1804 515 193 0 34 chrX 159817746 159817864 -6832432 + Lx4B LINE L1 6941 7054 -4 7 1804 211 386 56 62 chrX 159817946 159818457 -6831839 + L2b LINE L2 2637 3139 -236 7 1804 509 250 120 8 chrX 159818553 159818678 -6831618 - B1_Mur2 SINE Alu -10 139 1 7 1804 682 283 40 6 chrX 159818723 159818897 -6831399 - B3A SINE B2 -18 180 1 7 1804 387 0 0 0 chrX 159819014 159819057 -6831239 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 1804 351 0 0 0 chrX 159820211 159820250 -6830046 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1804 305 321 140 83 chrX 159820444 159820937 -6829359 + HAL1 LINE L1 1692 2212 -295 7 1804 23 54 0 0 chrX 159821012 159821049 -6829247 + AT_rich Low_complexity Low_complexity 1 37 0 7 1804 23 33 0 0 chrX 159821101 159821131 -6829165 + AT_rich Low_complexity Low_complexity 1 30 0 7 1804 4487 298 62 31 chrX 159821432 159821820 -6828476 - Lx8 LINE L1 -196 7277 6876 7 1804 2664 173 12 2 chrX 159821820 159822237 -6828059 + MTC LTR MaLR 1 421 0 7 1804 4487 298 62 31 chrX 159822237 159823201 -6827095 - Lx8 LINE L1 -598 6875 5896 7 1804 321 26 0 0 chrX 159823201 159823239 -6827057 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1804 4487 242 61 18 chrX 159823239 159823843 -6826453 - Lx8 LINE L1 -1578 5895 5245 7 1804 414 0 0 0 chrX 159823843 159823889 -6826407 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 7 1804 2890 241 61 18 chrX 159823889 159824087 -6826209 - Lx8 LINE L1 -636 5244 5045 7 1804 2944 149 25 124 chrX 159824111 159824865 -6825431 - RMER6A LTR ERVK 0 756 1 7 1804 507 265 23 0 chrX 159824866 159824998 -6825298 - Lx8 LINE L1 -856 5024 4890 7 1804 648 175 101 40 chrX 159825002 159825151 -6825145 + L1_Mur3 LINE L1 3695 3852 -2028 7 1804 360 0 0 0 chrX 159825326 159825366 -6824930 + (TA)n Simple_repeat Simple_repeat 2 41 0 7 1804 918 275 65 43 chrX 159825369 159825646 -6824650 - B4 SINE B4 -8 284 2 7 1804 33 43 0 0 chrX 159825692 159825739 -6824557 + AT_rich Low_complexity Low_complexity 1 47 0 7 1804 322 326 79 0 chrX 159825957 159826046 -6824250 + PB1D10 SINE Alu 1 96 -21 7 1804 628 248 110 128 chrX 159826998 159827335 -6822961 + MTE2a LTR MaLR 6 336 -43 7 1804 1691 39 29 14 chrX 159827394 159827603 -6822693 - L1Md_F3 LINE L1 -15 6569 6358 7 1804 4531 32 2 0 chrX 159827603 159828130 -6822166 + L1Md_F3 LINE L1 5853 6380 -204 7 1804 813 179 7 28 chrX 159828882 159829026 -6821270 - B1_Mur3 SINE Alu -6 143 3 7 1804 322 299 72 36 chrX 159829119 159829230 -6821066 + MER20 DNA MER1_type 105 219 0 7 1804 15613 92 6 1 chrX 159829276 159830262 -6820034 + L1_Mus1 LINE L1 3745 4733 -1150 7 1804 225 0 0 0 chrX 159830262 159830287 -6820009 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7 1804 15613 74 7 1 chrX 159830287 159832106 -6818190 + L1_Mus1 LINE L1 4734 6567 0 7 1804 424 285 138 96 chrX 159832556 159832816 -6817480 + B4A SINE B4 1 271 -21 7 1804 285 319 40 86 chrX 159833004 159833155 -6817141 - MLT1I LTR MaLR -42 369 226 7 1804 244 119 0 33 chrX 159833205 159833266 -6817030 + A-rich Low_complexity Low_complexity 1 59 0 7 1804 182 178 43 43 chrX 159833365 159833412 -6816884 - L2 LINE L2 -521 2898 2852 7 1804 5027 64 10 0 chrX 159834126 159834737 -6815559 + L1_Mus1 LINE L1 5951 6567 0 7 1804 423 293 52 21 chrX 159834898 159835090 -6815206 + L1M5 LINE L1 4401 4598 -1548 7 1804 1032 245 55 21 chrX 159835093 159835432 -6814864 + MTD LTR MaLR 9 397 -22 7 1804 895 70 0 0 chrX 159835553 159835668 -6814628 - B1_Mm SINE Alu -10 137 23 7 1804 253 229 143 12 chrX 159836600 159836684 -6813612 - RMER15 LTR ERVL -129 446 352 7 1804 207 88 0 0 chrX 159837509 159837543 -6812753 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 7 1804 1335 38 0 0 chrX 159837543 159837702 -6812594 - B2_Mm1t SINE B2 -33 160 2 7 1804 282 143 0 0 chrX 159838049 159838098 -6812198 + (TCC)n Simple_repeat Simple_repeat 3 51 0 7 1804 2577 73 59 5 chrX 159838106 159838282 -6812014 - BGLII LTR ERVK 0 421 245 7 1804 315 0 0 0 chrX 159838282 159838317 -6811979 + (TCC)n Simple_repeat Simple_repeat 2 36 0 7 1804 2577 73 59 5 chrX 159838317 159838513 -6811783 - BGLII LTR ERVK -177 244 29 7 1804 513 186 22 0 chrX 159838513 159838633 -6811663 + L1_Mur2 LINE L1 3001 3125 -2755 7 1804 269 306 16 0 chrX 159838909 159838971 -6811325 - ID4 SINE ID -19 64 2 7 1804 1236 291 17 22 chrX 159838999 159839357 -6810939 - Lx5 LINE L1 -4 7046 6691 7 1804 391 276 40 8 chrX 159839432 159839526 -6810770 - PB1D7 SINE Alu -21 96 3 7 1804 207 100 0 0 chrX 159840147 159840177 -6810119 + (TCCC)n Simple_repeat Simple_repeat 4 33 0 7 1804 225 154 0 0 chrX 159840176 159840215 -6810081 + T-rich Low_complexity Low_complexity 1 39 0 7 1804 1325 41 0 0 chrX 159840215 159840362 -6809934 - B1_Mus2 SINE Alu 0 147 1 7 1804 385 231 250 57 chrX 159840390 159840514 -6809782 - B1F SINE Alu -1 148 1 7 1804 1626 155 57 68 chrX 159840566 159840904 -6809392 + ORR1C1 LTR MaLR 1 305 -73 7 1804 946 99 0 0 chrX 159840908 159841039 -6809257 - Lx2B LINE L1 -1230 5770 5640 7 1804 387 276 92 50 chrX 159841039 159841180 -6809116 - RLTR41 LTR ERV1 0 446 300 7 1804 566 99 12 0 chrX 159841540 159841621 -6808675 - L1_Mur2 LINE L1 -244 5633 5552 7 1804 4061 206 70 21 chrX 159841618 159841704 -6808592 + Lx2B LINE L1 5999 6084 -916 7 1804 4010 99 54 4 chrX 159841704 159842241 -6808055 + LTRIS2 LTR ERV1 1 564 0 7 1804 4061 206 70 21 chrX 159842241 159843106 -6807190 + Lx2B LINE L1 6085 6997 -3 7 1804 5195 205 40 80 chrX 159843106 159844255 -6806041 + ORR1C1-int LTR MaLR 91 1197 -173 7 1804 828 44 9 0 chrX 159844255 159844369 -6805927 - L1Md_F3 LINE L1 0 6584 6470 7 1804 5195 205 40 80 chrX 159844369 159844552 -6805744 + ORR1C1-int LTR MaLR 1198 1370 0 7 1804 2085 139 66 66 chrX 159844562 159844940 -6805356 + ORR1C1 LTR MaLR 1 378 0 7 1804 797 298 84 24 chrX 159844993 159845244 -6805052 + B4 SINE B4 27 292 0 7 1804 408 286 95 48 chrX 159845642 159845789 -6804507 + B4A SINE B4 139 292 0 7 1804 355 280 20 20 chrX 159845950 159846052 -6804244 - PB1D10 SINE Alu -1 116 15 7 1804 4548 65 12 19 chrX 159846079 159846645 -6803651 + LTRIS2 LTR ERV1 1 562 -2 7 1804 661 293 61 63 chrX 159846662 159847106 -6803190 - L1MB8 LINE L1 -6 6172 5730 7 1804 601 302 180 35 chrX 159847231 159847770 -6802526 + Lx9 LINE L1 7028 7644 0 7 1804 6512 171 53 8 chrX 159847843 159849640 -6800656 - Lx5 LINE L1 0 7050 5657 7 1804 5522 133 38 52 chrX 159849636 159849856 -6800440 - Lx5 LINE L1 -3623 2254 2050 7 1804 387 0 0 0 chrX 159849856 159849899 -6800397 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 1804 573 15 0 0 chrX 159849899 159849964 -6800332 + (GA)n Simple_repeat Simple_repeat 1 66 0 7 1804 5522 146 33 42 chrX 159849964 159851031 -6799265 - Lx5 LINE L1 -3828 2049 979 7 1804 341 281 79 84 chrX 159851380 159851582 -6798714 + MER31-int LTR ERV1 4001 4201 -735 7 1804 1200 79 104 0 chrX 159851862 159852026 -6798270 + B2_Mm2 SINE B2 1 181 -14 7 1804 1040 197 111 4 chrX 159853654 159853969 -6796327 - MTD LTR MaLR -2 417 43 7 1804 2780 127 32 5 chrX 159853989 159854431 -6795865 + RMER4A LTR ERVK 12 465 -1 7 1804 265 116 0 23 chrX 159854432 159854476 -6795820 - MTD LTR MaLR -378 43 1 7 1804 222 256 0 0 chrX 159854832 159854875 -6795421 + C-rich Low_complexity Low_complexity 4 46 0 7 1804 730 223 6 6 chrX 159855433 159855591 -6794705 + MER5A1 DNA MER1_type 9 166 0 7 1804 199 281 152 72 chrX 159855697 159855835 -6794461 + MER5B DNA MER1_type 23 171 -7 7 1804 314 326 14 49 chrX 159856746 159856888 -6793408 - MER34A1 LTR ERV1 -77 510 374 7 1804 352 220 15 20 chrX 159857032 159857236 -6793060 + GA-rich Low_complexity Low_complexity 1 203 0 7 1804 346 111 194 0 chrX 159857237 159857381 -6792915 + (TAGG)n Simple_repeat Simple_repeat 4 175 0 7 1804 267 157 0 0 chrX 159857417 159857487 -6792809 + GA-rich Low_complexity Low_complexity 6 75 0 7 1804 294 431 13 27 chrX 159857784 159857934 -6792362 - LTR41B LTR ERVL -383 375 228 7 1804 840 283 33 7 chrX 159859572 159859656 -6790640 - B4 SINE B4 -18 274 219 7 1804 1140 98 0 0 chrX 159859656 159859820 -6790476 + (TTCCC)n Simple_repeat Simple_repeat 4 167 0 7 1804 840 235 48 12 chrX 159859820 159859939 -6790357 - B4 SINE B4 -74 218 102 7 1804 452 290 23 94 chrX 159859932 159860103 -6790193 - RSINE1 SINE B4 -3 162 4 7 1804 213 318 225 20 chrX 159860172 159860323 -6789973 - MIR3 SINE MIR -13 195 14 7 1804 185 314 0 69 chrX 159860333 159860405 -6789891 - MIR3 SINE MIR -23 185 119 7 1804 227 225 41 27 chrX 159861121 159861194 -6789102 + Kanga1 DNA Tc2 5 78 -1667 7 1804 349 241 184 57 chrX 159861203 159861344 -6788952 - RSINE1 SINE B4 -4 161 3 7 1804 236 345 35 17 chrX 159861344 159861456 -6788840 + Kanga1 DNA Tc2 51 164 -1581 7 1804 725 49 10 0 chrX 159861871 159861973 -6788323 + (TC)n Simple_repeat Simple_repeat 2 104 0 7 1804 3757 197 68 83 chrX 159862116 159862987 -6787309 - RMER13A LTR ERVK 0 860 3 7 1804 1210 238 85 58 chrX 159863432 159863587 -6786709 - MTD LTR MaLR -14 405 232 7 1804 5509 67 6 0 chrX 159863587 159864247 -6786049 - L1_Mus1 LINE L1 -4 6563 5900 7 1804 1284 54 0 0 chrX 159864252 159864399 -6785897 - B1_Mus2 SINE Alu 0 147 1 7 1804 1210 238 85 58 chrX 159864399 159864410 -6785886 - MTD LTR MaLR -192 227 219 7 1804 450 0 0 0 chrX 159864410 159864460 -6785836 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 7 1804 1210 238 85 58 chrX 159864460 159864616 -6785680 - MTD LTR MaLR -201 218 67 7 1804 180 111 0 0 chrX 159864617 159864644 -6785652 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1804 870 59 0 8 chrX 159864644 159864763 -6785533 - B1_Mus1 SINE Alu 0 148 31 7 1804 281 286 12 49 chrX 159864759 159864840 -6785456 - MTD LTR MaLR -339 80 3 7 1804 820 294 64 35 chrX 159864875 159865157 -6785139 + B4A SINE B4 3 292 0 7 1804 335 330 71 10 chrX 159865189 159865385 -6784911 + Kanga1 DNA Tc2 1455 1662 -83 7 1804 490 77 21 21 chrX 159865400 159865493 -6784803 + (TCTCTG)n Simple_repeat Simple_repeat 4 96 0 7 1804 333 0 0 0 chrX 159865498 159865535 -6784761 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 1804 589 314 73 66 chrX 159865535 159865740 -6784556 - B4A SINE B4 -30 262 55 8 1804 3103 84 18 2 chrX 159865740 159866134 -6784162 + MTB LTR MaLR 1 400 0 8 1804 589 314 73 66 chrX 159866134 159866187 -6784109 - B4A SINE B4 -238 54 2 8 1804 236 288 0 0 chrX 159866202 159866268 -6784028 + Kanga1 DNA Tc2 1676 1741 -4 7 1804 742 234 116 6 chrX 159867059 159867385 -6782911 + MTEa LTR MaLR 2 363 -16 8 1804 827 260 96 25 chrX 159867629 159868094 -6782202 + L1ME3A LINE L1 5423 5922 -251 8 1804 414 0 0 0 chrX 159868299 159868345 -6781951 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1804 242 314 111 28 chrX 159868404 159868548 -6781748 + L1ME3A LINE L1 5988 6143 -30 8 1804 345 47 0 0 chrX 159868868 159868911 -6781385 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 1804 228 67 0 0 chrX 159868913 159868943 -6781353 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 1804 6829 126 16 6 chrX 159868944 159869962 -6780334 - Lx LINE L1 -6 6648 5621 8 1804 821 188 65 7 chrX 159869963 159870118 -6780178 - B3A SINE B2 -32 166 3 8 1804 714 262 71 0 chrX 159870226 159870394 -6779902 + ID_B1 SINE B4 3 182 -42 8 1804 402 333 0 44 chrX 159870298 159870411 -6779885 + PB1D10 SINE Alu 5 112 -5 8 1804 513 266 231 0 chrX 159871066 159871295 -6779001 + Lx8 LINE L1 7182 7463 -10 8 1804 544 240 9 66 chrX 159871367 159871504 -6778792 - B1F SINE Alu -20 129 1 8 1804 216 0 0 0 chrX 159871744 159871768 -6778528 + (CA)n Simple_repeat Simple_repeat 2 25 0 8 1804 1373 307 69 83 chrX 159872212 159872745 -6777551 - MLT1F2 LTR MaLR -34 526 1 8 1804 201 209 0 44 chrX 159872812 159872857 -6777439 + MIRm SINE MIR 120 162 -114 8 1804 390 251 74 74 chrX 159873450 159873639 -6776657 - RLTR23 LTR ERV1 0 430 242 8 1804 255 270 25 8 chrX 159873948 159874053 -6776243 + PB1D9 SINE Alu 7 148 -1 8 1804 383 319 17 116 chrX 159874112 159874123 -6776173 - RSINE1 SINE B4 0 165 155 8 1804 375 23 0 0 chrX 159874123 159874167 -6776129 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1804 383 319 17 116 chrX 159874167 159874336 -6775960 - RSINE1 SINE B4 -11 154 3 8 1804 360 0 0 0 chrX 159874454 159874494 -6775802 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 1804 423 0 0 0 chrX 159874622 159874669 -6775627 + (GA)n Simple_repeat Simple_repeat 2 48 0 8 1804 550 196 59 0 chrX 159875613 159875715 -6774581 + ID_B1 SINE B4 114 221 -3 8 1804 227 324 87 19 chrX 159875819 159875923 -6774373 - MIR SINE MIR -66 142 32 8 1804 837 217 42 53 chrX 159876069 159876415 -6773881 + MTD LTR MaLR 1 389 -30 8 1804 1034 215 77 0 chrX 159877322 159877517 -6772779 + B3 SINE B2 3 212 -4 8 1804 689 303 112 0 chrX 159877561 159877802 -6772494 - Lx8 LINE L1 -378 7095 6828 8 1804 929 280 38 4 chrX 159877813 159878078 -6772218 - L1_Mur3 LINE L1 -662 5218 4945 8 1804 465 315 109 58 chrX 159878086 159878399 -6771897 + Lx8 LINE L1 7105 7433 -40 8 1804 22 0 0 0 chrX 159879056 159879078 -6771218 + AT_rich Low_complexity Low_complexity 1 22 0 8 1804 459 216 116 100 chrX 159879233 159879423 -6770873 + B2_Mm2 SINE B2 3 195 0 8 1804 686 274 33 19 chrX 159879424 159879636 -6770660 + L1MA6 LINE L1 5718 5932 -368 8 1804 293 320 0 13 chrX 159879653 159879729 -6770567 + B4A SINE B4 2 76 -216 8 1804 721 242 114 66 chrX 159879769 159880101 -6770195 + L1MA6 LINE L1 5952 6299 -1 8 1804 767 248 0 32 chrX 159880103 159880307 -6769989 + Lx7 LINE L1 5640 5820 -524 8 1804 253 241 35 0 chrX 159880437 159880524 -6769772 + GA-rich Low_complexity Low_complexity 1 90 0 8 1804 579 197 90 0 chrX 159882301 159882423 -6767873 + ORR1D2 LTR MaLR 1 133 -237 8 1804 7010 85 5 2 chrX 159882423 159883378 -6766918 - L1VL1 LINE L1 -1561 4322 3365 8 1804 6008 87 25 44 chrX 159883367 159884853 -6765443 - L1VL1 LINE L1 -4015 1868 409 8 1804 1149 97 0 0 chrX 159884862 159885027 -6765269 + (TTTC)n Simple_repeat Simple_repeat 2 166 0 8 1804 1149 75 0 0 chrX 159885028 159885161 -6765135 - B1_Mus1 SINE Alu -14 134 2 8 1804 1254 278 88 27 chrX 159885161 159885571 -6764725 + Lx8 LINE L1 6898 7332 -141 8 1804 486 271 132 31 chrX 159885591 159885819 -6764477 + L1ME2 LINE L1 5723 5973 -191 8 1804 227 367 54 18 chrX 159886262 159886373 -6763923 - B4A SINE B4 -96 196 82 8 1804 231 329 36 12 chrX 159886435 159886518 -6763778 - B1F1 SINE Alu -22 98 14 8 1804 188 163 23 0 chrX 159886866 159886909 -6763387 + GA-rich Low_complexity Low_complexity 5 48 0 8 1804 24 32 0 0 chrX 159887043 159887074 -6763222 + AT_rich Low_complexity Low_complexity 1 31 0 8 1804 1176 109 0 0 chrX 159887074 159887221 -6763075 - B1_Mus2 SINE Alu 0 147 1 8 1804 21 0 0 0 chrX 159887300 159887321 -6762975 + AT_rich Low_complexity Low_complexity 1 21 0 8 1804 969 257 44 0 chrX 159887407 159887613 -6762683 + B3 SINE B2 1 215 -1 8 1804 1697 98 8 30 chrX 159887682 159887945 -6762351 + Lx2A LINE L1 6747 7003 -5 8 1804 22 35 0 0 chrX 159887947 159887976 -6762320 + AT_rich Low_complexity Low_complexity 1 29 0 8 1804 3826 51 4 2 chrX 159888018 159888487 -6761809 - L1_Mus2 LINE L1 -371 6195 5726 8 1804 2755 62 3 26 chrX 159888487 159888866 -6761430 + L1_Mus2 LINE L1 6197 6566 0 8 1804 354 309 77 26 chrX 159888876 159889032 -6761264 - Arthur1B DNA Tip100 -1041 184 21 8 1804 500 363 26 53 chrX 159889343 159889570 -6760726 + MER58A DNA MER1_type 3 223 -1 8 1804 545 309 69 112 chrX 159889570 159889809 -6760487 + ORR1E LTR MaLR 1 232 -127 8 1804 2109 146 27 22 chrX 159889809 159890174 -6760122 - ORR1B2 LTR MaLR 0 367 1 8 1804 545 309 69 112 chrX 159890174 159890309 -6759987 + ORR1E LTR MaLR 233 359 0 8 1804 322 248 144 0 chrX 159890723 159890848 -6759448 + LTR16C LTR ERVL 294 436 -53 8 1804 318 262 118 72 chrX 159891662 159891814 -6758482 - HAL1-3A_ME LINE L1 -416 2442 2284 8 1804 576 271 0 16 chrX 159892360 159892484 -6757812 + PB1 SINE Alu 6 127 0 8 1804 251 343 0 0 chrX 159892674 159892744 -6757552 + B4 SINE B4 132 201 -91 8 1804 579 324 84 58 chrX 159892809 159892965 -6757331 + L1MEg LINE L1 993 1147 -5095 8 1804 336 227 103 0 chrX 159892965 159893062 -6757234 + PB1D10 SINE Alu 5 111 -6 8 1804 579 328 94 51 chrX 159893062 159893550 -6756746 + L1MEg LINE L1 1148 1732 -775 8 1804 22 0 0 0 chrX 159893794 159893816 -6756480 + AT_rich Low_complexity Low_complexity 1 22 0 8 1804 513 286 31 8 chrX 159893947 159894074 -6756222 - ID_B1 SINE B4 -6 218 89 8 1804 234 154 77 0 chrX 159894156 159894208 -6756088 + L1M4 LINE L1 4412 4467 -1679 8 1804 613 299 6 13 chrX 159894225 159894381 -6755915 + B3 SINE B2 9 163 -53 8 1804 760 263 17 88 chrX 159894498 159894589 -6755707 + ID SINE ID 4 88 -136 8 1804 933 235 49 0 chrX 159894589 159894793 -6755503 + B3 SINE B2 3 216 0 8 1804 760 263 17 88 chrX 159894793 159894939 -6755357 + ID_B1 SINE B4 89 224 0 8 1804 1355 279 25 20 chrX 159894956 159895515 -6754781 - L1M4 LINE L1 -1745 4401 3840 8 1804 244 292 7 192 chrX 159895524 159895762 -6754534 - MTEb LTR MaLR -5 354 144 8 1804 740 245 71 44 chrX 159895947 159896242 -6754054 - L1M4 LINE L1 -2310 3836 3534 8 1804 1371 90 16 5 chrX 159896254 159896443 -6753853 - B2_Mm2 SINE B2 -4 191 1 8 1804 6975 85 12 24 chrX 159896648 159896900 -6753396 - L1_Mus4 LINE L1 0 6636 6398 8 1804 261 0 0 0 chrX 159896900 159896929 -6753367 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 8 1804 6975 94 14 18 chrX 159896929 159898001 -6752295 - L1_Mus4 LINE L1 -239 6397 5316 8 1804 7974 76 28 1 chrX 159897996 159899346 -6750950 - L1VL4 LINE L1 -1464 2095 708 8 1804 253 307 13 0 chrX 159899346 159899421 -6750875 + RMER19C LTR ERVK 204 279 -332 8 1804 1559 232 31 84 chrX 159899437 159899851 -6750445 + RMER19C LTR ERVK 220 611 0 8 1804 303 234 53 40 chrX 159899866 159900017 -6750279 - L1M4 LINE L1 -2812 3334 3182 8 1804 363 248 0 106 chrX 159900019 159900127 -6750169 - ID4 SINE ID -32 120 25 8 1804 4596 50 30 0 chrX 159900127 159900693 -6749603 - L1Md_F3 LINE L1 -8 6576 5994 8 1804 363 203 0 80 chrX 159900693 159900717 -6749579 - ID4 SINE ID -59 24 5 8 1804 688 269 131 34 chrX 159900720 159901217 -6749079 - L1M4 LINE L1 -3000 3146 2602 8 1804 183 129 0 0 chrX 159901309 159901340 -6748956 + (A)n Simple_repeat Simple_repeat 1 31 0 8 1804 513 292 139 6 chrX 159901647 159901819 -6748477 + MER20 DNA MER1_type 20 214 -5 8 1804 453 36 0 0 chrX 159901890 159901945 -6748351 + (CATA)n Simple_repeat Simple_repeat 1 55 0 8 1804 2859 184 50 72 chrX 159902189 159902964 -6747332 - L1_Mur3 LINE L1 -6679 1033 276 8 1804 1978 251 25 157 chrX 159903132 159904030 -6746266 - RMER1A Other Other -250 780 2 8 1804 462 36 0 0 chrX 159904035 159904091 -6746205 + (GGGA)n Simple_repeat Simple_repeat 3 58 0 8 1804 322 318 242 5 chrX 159904091 159904281 -6746015 - RMER1A Other Other -795 235 1 8 1804 1022 174 113 13 chrX 159904251 159904489 -6745807 - RMER1B Other Other -651 415 154 8 1804 513 0 0 0 chrX 159904552 159904609 -6745687 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 1804 628 329 55 67 chrX 159904746 159905107 -6745189 - ORR1E LTR MaLR 0 359 3 8 225 34774 60 6 9 chrX 159905328 159911513 -6738783 - L1Md_F3 LINE L1 -5 6579 446 8 1805 398 357 54 0 chrX 159911622 159911751 -6738545 - B1F SINE Alu -5 144 9 8 1805 303 361 122 17 chrX 159911786 159911958 -6738338 + MLT2F LTR ERVL 230 419 -244 8 1805 255 255 103 31 chrX 159912476 159912573 -6737723 + LTR84b LTR ERVL 64 167 -594 8 1805 342 107 0 0 chrX 159912578 159912634 -6737662 + (CA)n Simple_repeat Simple_repeat 2 57 0 8 1805 1060 212 187 13 chrX 159913131 159913446 -6736850 + ORR1D2 LTR MaLR 1 370 0 8 1805 2172 184 51 14 chrX 159913690 159914198 -6736098 - RLTR11A2 LTR ERVK 0 527 1 8 1805 321 309 0 12 chrX 159914367 159914449 -6735847 - ID4_ SINE ID -2 81 1 8 1805 217 329 0 0 chrX 159916095 159916165 -6734131 + (TGG)n Simple_repeat Simple_repeat 3 72 0 8 1805 414 0 0 0 chrX 159917158 159917204 -6733092 + (TG)n Simple_repeat Simple_repeat 1 46 0 8 1805 282 56 0 0 chrX 159917204 159917240 -6733056 + (GA)n Simple_repeat Simple_repeat 2 37 0 8 1805 29 28 0 0 chrX 159918516 159918552 -6731744 + AT_rich Low_complexity Low_complexity 1 36 0 8 1805 23 33 0 0 chrX 159918846 159918876 -6731420 + AT_rich Low_complexity Low_complexity 1 30 0 9 1805 932 228 123 66 chrX 159919428 159919671 -6730625 - RMER17C LTR ERVK -57 353 84 9 1805 198 0 0 0 chrX 159919671 159919693 -6730603 + (CAGAGA)n Simple_repeat Simple_repeat 3 24 0 9 1805 932 228 123 66 chrX 159919693 159919783 -6730513 - RMER17C LTR ERVK -327 83 1 9 1805 358 332 107 19 chrX 159920767 159920973 -6729323 + L1M5 LINE L1 4622 4845 -1301 9 1805 1987 180 58 12 chrX 159921804 159922204 -6728092 + RMER5 LTR ERV1 1 418 -116 9 1805 1206 173 76 0 chrX 159922204 159922429 -6727867 - Lx6 LINE L1 -920 6540 6299 9 1805 273 29 0 0 chrX 159922767 159922801 -6727495 + (TC)n Simple_repeat Simple_repeat 2 35 0 9 1805 254 50 25 0 chrX 159922801 159922840 -6727456 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1805 568 354 57 0 chrX 159923345 159923554 -6726742 + MER58A DNA MER1_type 4 224 0 9 1805 5375 153 64 77 chrX 159923609 159923626 -6726670 + L1_Mur3 LINE L1 2574 2590 -3290 9 1805 429 20 0 0 chrX 159923626 159923676 -6726620 + (TA)n Simple_repeat Simple_repeat 2 51 0 9 1805 5375 153 64 77 chrX 159923676 159924993 -6725303 + L1_Mur3 LINE L1 2591 3890 -1990 9 1805 28672 116 14 1 chrX 159925005 159931118 -6719178 + L1_Mus1 LINE L1 380 6567 0 9 1805 3677 142 1 60 chrX 159931138 159931867 -6718429 + L1_Mur3 LINE L1 3878 4563 -1317 9 1805 4083 181 60 34 chrX 159931858 159932432 -6717864 - L1_Mur3 LINE L1 -306 5574 4983 9 1805 4008 69 6 6 chrX 159932432 159932960 -6717336 - L1Md_F2 LINE L1 0 6582 6055 9 1805 4083 181 60 34 chrX 159932960 159933359 -6716937 - L1_Mur3 LINE L1 -898 4982 4576 9 1805 3732 211 73 10 chrX 159933338 159934122 -6716174 + Lx6 LINE L1 6581 7418 -42 9 1805 3001 152 103 22 chrX 159934122 159934426 -6715870 + RMER6C LTR ERVK 1 348 -342 9 1805 453 19 0 0 chrX 159934426 159934480 -6715816 + (TC)n Simple_repeat Simple_repeat 2 55 0 9 1805 3001 152 103 22 chrX 159934480 159934813 -6715483 + RMER6C LTR ERVK 349 690 0 9 1805 3732 211 73 10 chrX 159934813 159934852 -6715444 + Lx6 LINE L1 7419 7456 -4 9 1805 1999 234 128 16 chrX 159934869 159935426 -6714870 + MTD-int LTR MaLR 381 999 -259 9 1805 564 77 0 0 chrX 159935439 159935517 -6714779 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 9 1805 760 86 0 9 chrX 159935524 159935630 -6714666 - B2_Mm2 SINE B2 -62 133 29 9 1805 2910 31 0 8 chrX 159935630 159935982 -6714314 - L1Md_T LINE L1 -1 6581 6233 9 1805 4230 46 4 0 chrX 159935982 159936527 -6713769 - L1Md_T LINE L1 -190 6392 5846 9 1805 231 94 0 0 chrX 159936528 159936560 -6713736 - B3A SINE B2 -166 32 1 9 1805 647 206 99 78 chrX 159936601 159936843 -6713453 + MTD-int LTR MaLR 1012 1258 0 9 1805 1457 213 42 36 chrX 159936847 159937183 -6713113 + MTD LTR MaLR 9 346 -73 9 1805 24 0 0 0 chrX 159937909 159937933 -6712363 + AT_rich Low_complexity Low_complexity 1 24 0 9 1805 6356 47 0 0 chrX 159937933 159938698 -6711598 - L1Md_F2 LINE L1 -14 6568 5804 9 1805 288 224 262 48 chrX 159939019 159939122 -6711174 + RMER15 LTR ERVL 345 469 -106 9 1805 357 260 130 37 chrX 159939319 159939427 -6710869 - B3 SINE B2 -98 118 1 9 1805 2954 125 37 4 chrX 159939463 159939921 -6710375 - Lx4A LINE L1 -1 7057 6585 9 1805 1923 174 73 5 chrX 159939977 159940346 -6709950 - ORR1B1 LTR MaLR 0 394 1 9 1805 415 278 69 25 chrX 159940592 159940795 -6709501 + RLTR42-int LTR ERVK 1189 1400 -4122 9 1805 324 0 0 0 chrX 159941148 159941184 -6709112 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 9 1805 700 196 49 0 chrX 159941187 159941330 -6708966 - B1_Mur4 SINE Alu 0 150 1 9 1805 247 284 52 39 chrX 159941899 159941976 -6708320 + MIR3 SINE MIR 119 196 -12 9 1805 1306 267 195 4 chrX 159942075 159942613 -6707683 - Lx6 LINE L1 -2 7458 6818 9 1805 774 246 6 0 chrX 159942642 159942821 -6707475 - Lx5 LINE L1 -687 6363 6184 9 1805 234 0 0 0 chrX 159943371 159943397 -6706899 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 9 1805 518 256 22 43 chrX 159943397 159943536 -6706760 - B1F1 SINE Alu -11 138 3 9 1805 678 25 0 0 chrX 159943559 159943639 -6706657 + (GA)n Simple_repeat Simple_repeat 2 81 0 9 1805 22 0 0 0 chrX 159943706 159943728 -6706568 + AT_rich Low_complexity Low_complexity 1 22 0 9 1805 281 332 159 8 chrX 159944754 159945018 -6705278 + L1MC LINE L1 5567 5870 -2012 9 1805 958 297 56 11 chrX 159945296 159945653 -6704643 + Lx8 LINE L1 7047 7419 -54 9 1805 654 269 34 7 chrX 159945958 159946104 -6704192 + RSINE1 SINE B4 1 150 -15 9 1805 189 107 0 0 chrX 159946114 159946142 -6704154 + (ATG)n Simple_repeat Simple_repeat 2 29 0 9 1805 238 322 38 76 chrX 159947354 159947485 -6702811 - B4 SINE B4 -66 226 101 9 1805 561 206 0 19 chrX 159947382 159947486 -6702810 - PB1D7 SINE Alu -2 118 17 9 1805 387 0 0 0 chrX 159948675 159948718 -6701578 + (TC)n Simple_repeat Simple_repeat 2 44 0 9 1805 405 0 0 0 chrX 159948718 159948762 -6701534 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1805 738 281 19 0 chrX 159948775 159948935 -6701361 - RSINE1 SINE B4 -2 163 1 9 1805 213 128 26 0 chrX 159949092 159949131 -6701165 + GA-rich Low_complexity Low_complexity 1 40 0 9 1805 186 362 99 70 chrX 159951041 159951213 -6699083 - MIR3 SINE MIR -22 186 10 9 1805 244 264 42 0 chrX 159952074 159952146 -6698150 - MER72 LTR ERV1 -207 515 441 9 1805 219 157 0 0 chrX 159953357 159953408 -6696888 + (CA)n Simple_repeat Simple_repeat 2 52 0 9 1805 474 233 39 46 chrX 159954110 159954263 -6696033 + B2_Mm2 SINE B2 43 194 -1 9 1805 269 254 14 43 chrX 159954780 159954850 -6695446 - BC1_Mm scRNA scRNA -67 85 18 9 1805 701 285 0 24 chrX 159955413 159955582 -6694714 - MER96 DNA hAT 0 175 11 9 1805 590 257 128 30 chrX 159955703 159956032 -6694264 - Lx9 LINE L1 -1 7643 7283 9 1805 365 270 18 107 chrX 159956033 159956182 -6694114 - L1MA8 LINE L1 -20 6271 6130 9 1805 3261 41 12 19 chrX 159956182 159956606 -6693690 + L1Md_F3 LINE L1 6164 6584 0 9 1805 365 270 18 107 chrX 159956606 159956680 -6693616 - L1MA8 LINE L1 -162 6129 6068 9 1805 239 366 99 47 chrX 159957263 159957495 -6692801 + MLT1M LTR MaLR 429 672 0 9 1805 441 290 28 42 chrX 159957936 159958080 -6692216 - ID_B1 SINE B4 -2 222 81 9 1805 2294 250 55 53 chrX 159958312 159958613 -6691683 - Lx8 LINE L1 -385 7088 6799 9 1805 745 205 134 21 chrX 159958613 159958807 -6691489 - B3 SINE B2 0 216 1 9 1805 2294 250 55 53 chrX 159958807 159959219 -6691077 - Lx8 LINE L1 -675 6798 6374 9 1805 241 319 14 14 chrX 159959331 159959404 -6690892 + PB1D10 SINE Alu 1 73 -44 9 1805 243 241 0 84 chrX 159959396 159959491 -6690805 - ORSL DNA Tip100 -72 203 117 9 1805 337 240 103 99 chrX 159959781 159959994 -6690302 + B3 SINE B2 3 216 0 9 1805 237 318 0 23 chrX 159960132 159960219 -6690077 - L1MC5 LINE L1 -1133 6828 6744 9 1805 269 203 0 14 chrX 159961204 159961274 -6689022 + Lx7 LINE L1 7608 7676 -20 9 1805 714 287 92 15 chrX 159961903 159962229 -6688067 + Lx8 LINE L1 7121 7471 -2 9 1805 326 298 198 21 chrX 159962276 159962564 -6687732 + L1MC4 LINE L1 7580 7918 -124 9 1805 30 0 0 0 chrX 159962643 159962673 -6687623 + AT_rich Low_complexity Low_complexity 1 30 0 9 1805 1576 197 83 14 chrX 159962705 159962880 -6687416 + ORR1D1 LTR MaLR 1 175 -199 9 1805 941 104 7 0 chrX 159962880 159963024 -6687272 + (TTCC)n Simple_repeat Simple_repeat 4 148 0 9 1805 1576 197 83 14 chrX 159963024 159963072 -6687224 + ORR1D1 LTR MaLR 176 228 -146 9 1805 315 0 0 0 chrX 159963072 159963107 -6687189 + (CCTG)n Simple_repeat Simple_repeat 4 38 0 9 1805 1576 197 83 14 chrX 159963107 159963232 -6687064 + ORR1D1 LTR MaLR 229 373 -1 9 1805 361 229 7 147 chrX 159963366 159963509 -6686787 - Charlie7 DNA MER1_type -2143 469 347 9 1805 3358 30 5 5 chrX 159963977 159964373 -6685923 + MTA_Mm LTR MaLR 1 396 0 9 1805 956 266 20 45 chrX 159964717 159964961 -6685335 - B4A SINE B4 0 292 55 9 1805 333 0 0 0 chrX 159964995 159965032 -6685264 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 1805 276 296 84 14 chrX 159965128 159965278 -6685018 - MIRc SINE MIR -70 198 31 9 1805 923 49 72 12 chrX 159965348 159965514 -6684782 + (TCCC)n Simple_repeat Simple_repeat 1 176 0 9 1805 429 54 0 0 chrX 159965522 159965578 -6684718 + (CA)n Simple_repeat Simple_repeat 1 56 0 9 1805 360 288 0 0 chrX 159965794 159965874 -6684422 + ID2 SINE ID 1 80 -3 9 1805 187 239 103 15 chrX 159967219 159967287 -6683009 - MIR SINE MIR 0 262 189 9 1805 298 52 74 49 chrX 159967598 159967679 -6682617 + (TCTCTG)n Simple_repeat Simple_repeat 2 84 0 9 1805 367 256 153 49 chrX 159967679 159967823 -6682473 - MIR SINE MIR -90 186 22 9 1805 369 0 0 0 chrX 159967893 159967934 -6682362 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 1805 653 215 45 118 chrX 159968593 159968814 -6681482 + B3A SINE B2 11 215 -1 9 1805 294 212 153 0 chrX 159968877 159968962 -6681334 - Lx9 LINE L1 -11 7633 7536 9 1805 1365 124 63 24 chrX 159968963 159969209 -6681087 - Lx2A1 LINE L1 0 7008 6751 9 1805 279 114 0 0 chrX 159969209 159969253 -6681043 + (CATA)n Simple_repeat Simple_repeat 3 46 0 9 1805 744 126 232 6 chrX 159969262 159969430 -6680866 - Lx9 LINE L1 -183 7461 7256 9 1805 486 0 0 0 chrX 159970113 159970167 -6680129 + (TC)n Simple_repeat Simple_repeat 2 55 0 9 1805 333 125 0 0 chrX 159970167 159970222 -6680074 + (TG)n Simple_repeat Simple_repeat 1 56 0 9 1805 1000 292 39 0 chrX 159970226 159970486 -6679810 - B4 SINE B4 -22 270 1 9 1805 1340 256 19 9 chrX 159970652 159970976 -6679320 + MER58B DNA MER1_type 15 341 0 9 1805 4222 184 60 40 chrX 159971621 159972641 -6677655 - Lx9 LINE L1 -1 7643 6604 9 1805 1106 78 0 0 chrX 159972908 159973050 -6677246 + B1_Mus1 SINE Alu 2 143 -5 9 1805 644 235 4 150 chrX 159973115 159973355 -6676941 + B3 SINE B2 2 206 -10 9 1805 492 280 68 26 chrX 159973820 159974091 -6676205 + L1PB4 LINE L1 5570 5850 -306 9 1805 1005 258 132 24 chrX 159974091 159974432 -6675864 - MTE2a LTR MaLR -1 378 1 9 1805 431 269 32 27 chrX 159974712 159974899 -6675397 + Lx9 LINE L1 6881 7204 -440 9 1805 534 264 67 33 chrX 159974896 159975166 -6675130 + Lx9 LINE L1 7339 7617 -27 9 1805 309 310 31 37 chrX 159975644 159975805 -6674491 + L1MEg LINE L1 72 231 -5853 9 1805 312 291 108 31 chrX 159975932 159976127 -6674169 + L1MEg LINE L1 389 598 -5486 9 1805 762 242 61 10 chrX 159976207 159976403 -6673893 - B3 SINE B2 -10 206 1 1 1805 406 328 69 58 chrX 159976691 159976853 -6673443 + L1MEg LINE L1 1026 1169 -4915 9 1805 1190 96 11 0 chrX 159976853 159977031 -6673265 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 1805 406 328 69 58 chrX 159977031 159977422 -6672874 + L1MEg LINE L1 1170 1585 -4499 9 1805 468 240 0 30 chrX 159977532 159977631 -6672665 + RSINE1 SINE B4 2 97 -68 1 1805 317 276 52 38 chrX 159977694 159977905 -6672391 + L1MEg LINE L1 1672 1885 -4199 9 1805 2621 134 17 10 chrX 159977912 159978320 -6671976 - MTC LTR MaLR -8 413 3 1 1805 278 287 9 36 chrX 159978528 159978640 -6671656 + Arthur1 DNA Tip100 3363 3471 -476 1 1805 327 291 13 0 chrX 159978695 159978774 -6671522 + MLT1A1 LTR MaLR 65 144 -264 1 1805 353 355 36 16 chrX 159979009 159979201 -6671095 + L1MD3 LINE L1 5647 5842 -2153 1 1805 210 71 0 0 chrX 159979356 159979384 -6670912 + (TATG)n Simple_repeat Simple_repeat 4 31 0 1 1805 630 0 0 0 chrX 159979438 159979508 -6670788 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 1 1805 322 269 117 27 chrX 159979679 159979790 -6670506 + MLT1A1 LTR MaLR 269 389 -19 1 1805 255 196 45 126 chrX 159979791 159979902 -6670394 + Arthur1 DNA Tip100 3451 3552 -395 1 1805 908 175 17 11 chrX 159979909 159980088 -6670208 - Lx4A LINE L1 -8 7050 6871 1 1805 1171 126 82 5 chrX 159980188 159980396 -6669900 - Lx4A LINE L1 -202 6856 6633 1 1805 257 0 0 29 chrX 159980480 159980514 -6669782 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 1 1805 243 258 126 70 chrX 159980583 159980775 -6669521 - Lx9 LINE L1 -1 7643 7438 1 1805 3107 71 10 0 chrX 159980775 159981181 -6669115 - L1_Mus1 LINE L1 -1 6566 6157 1 1805 243 258 126 70 chrX 159981181 159981259 -6669037 - Lx9 LINE L1 -207 7437 7358 1 1805 279 316 0 92 chrX 159981292 159981379 -6668917 + ID4_ SINE ID 5 83 0 1 1805 325 312 94 31 chrX 159981389 159981644 -6668652 + Arthur1 DNA Tip100 3629 3899 -48 1 1805 201 398 0 0 chrX 159981823 159981911 -6668385 - L2a LINE L2 -1 3425 3338 1 1805 606 293 181 8 chrX 159981925 159982173 -6668123 - B4A SINE B4 -1 291 1 1 1805 301 326 27 5 chrX 159982258 159982443 -6667853 + L1ME1 LINE L1 5642 5830 -349 1 1805 341 271 84 0 chrX 159982514 159982621 -6667675 + L1ME1 LINE L1 5959 6074 -105 1 1805 454 285 44 24 chrX 159984192 159984397 -6665899 + Lx7 LINE L1 7151 7359 -337 1 1805 411 282 199 10 chrX 159984566 159984863 -6665433 + L1ME3 LINE L1 5786 6138 -24 1 1805 387 0 0 0 chrX 159987369 159987412 -6662884 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1805 197 276 94 75 chrX 159988961 159989067 -6661229 + MIRc SINE MIR 47 154 -114 1 1805 249 33 0 0 chrX 159989921 159989951 -6660345 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 1805 260 163 35 11 chrX 159989991 159990078 -6660218 + GA-rich Low_complexity Low_complexity 2 90 0 1 1805 3103 47 0 8 chrX 159990183 159990572 -6659724 + L1Md_F2 LINE L1 6195 6580 -2 1 1805 598 244 132 28 chrX 159990589 159990778 -6659518 + B3A SINE B2 5 214 -2 1 1805 202 382 13 0 chrX 159990804 159990880 -6659416 + MER5A DNA MER1_type 50 126 -63 1 1805 476 311 12 6 chrX 159991121 159991283 -6659013 + RSINE1 SINE B4 3 165 0 1 1805 321 255 0 122 chrX 159991309 159991416 -6658880 + MER5A1 DNA MER1_type 58 151 -15 1 1805 317 329 0 0 chrX 159991592 159991668 -6658628 + PB1D10 SINE Alu 1 76 -41 1 1805 272 252 25 18 chrX 159991760 159991851 -6658445 - B1F2 SINE Alu -56 93 5 1 1805 1268 254 21 0 chrX 159992600 159992888 -6657408 + MTE2b LTR MaLR 79 372 -7 1 1805 458 353 57 23 chrX 159992918 159993095 -6657201 + MLT1F LTR MaLR 63 245 -324 1 1805 651 282 129 48 chrX 159993095 159993427 -6656869 + ORR1E LTR MaLR 1 359 0 1 1805 667 264 224 19 chrX 159993429 159993513 -6656783 + MLT1F LTR MaLR 230 346 -202 1 1805 972 229 9 13 chrX 159993513 159993739 -6656557 - URR1B DNA MER1_type 0 225 1 1 1805 667 264 224 19 chrX 159993739 159993913 -6656383 + MLT1F LTR MaLR 347 541 -7 1 1805 827 259 94 7 chrX 159994526 159994802 -6655494 - L1MD3 LINE L1 -22 7973 7674 1 1805 392 325 0 9 chrX 159994873 159994988 -6655308 - ID_B1 SINE B4 -33 191 78 1 1805 349 278 0 34 chrX 159994988 159995107 -6655189 - L1MD3 LINE L1 -332 7663 7549 1 1805 468 111 0 0 chrX 159995152 159995224 -6655072 + (GGA)n Simple_repeat Simple_repeat 2 73 0 1 1805 836 243 182 85 chrX 159995240 159995618 -6654678 - MLT1D LTR MaLR -90 415 1 1 1805 389 162 14 0 chrX 159995643 159995717 -6654579 - L1MD3 LINE L1 -509 7486 7412 1 1805 202 328 0 0 chrX 159995846 159995904 -6654392 - L2c LINE L2 -39 3348 3291 1 1805 605 250 88 0 chrX 159996059 159996195 -6654101 + B3A SINE B2 1 148 -50 1 1805 378 315 0 0 chrX 159996219 159996327 -6653969 + PB1D10 SINE Alu 1 108 -9 1 1805 1701 72 0 0 chrX 159997078 159997299 -6652997 + L1Md_F2 LINE L1 5366 5586 -297 1 1805 7633 70 5 0 chrX 159997299 159998280 -6652016 + L1Md_F2 LINE L1 5587 6572 -10 1 1805 27 29 0 0 chrX 159998472 159998506 -6651790 + AT_rich Low_complexity Low_complexity 1 34 0 1 1805 296 233 206 48 chrX 159998525 159998686 -6651610 - MER58A DNA MER1_type 0 224 42 1 1805 355 250 122 26 chrX 159999204 159999319 -6650977 - B1F1 SINE Alu -7 142 17 1 1805 1503 146 27 16 chrX 159999738 159999995 -6650301 + Lx4A LINE L1 6794 7053 -5 1 1805 259 269 0 0 chrX 160000618 160000670 -6649626 + ID4_ SINE ID 2 53 -30 1 1805 498 296 6 48 chrX 160001248 160001284 -6649012 - B2_Mm2 SINE B2 -35 160 125 2 1805 531 0 0 0 chrX 160001284 160001343 -6648953 + (TG)n Simple_repeat Simple_repeat 1 59 0 3 1805 546 16 0 0 chrX 160001343 160001405 -6648891 + (GA)n Simple_repeat Simple_repeat 1 63 0 4 1805 691 227 39 0 chrX 160001405 160001534 -6648762 - B3A SINE B2 -65 133 1 2 1805 627 39 0 0 chrX 160001544 160001622 -6648674 + (TTCC)n Simple_repeat Simple_repeat 1 78 0 5 1805 725 281 34 40 chrX 160001858 160001892 -6648404 - L1M2 LINE L1 -368 5803 5771 6 1805 261 0 0 0 chrX 160001892 160001921 -6648375 + (TA)n Simple_repeat Simple_repeat 1 29 0 7 1805 878 243 31 16 chrX 160001921 160002183 -6648113 - L1M2 LINE L1 -401 5770 5509 6 1805 193 265 102 0 chrX 160002258 160002307 -6647989 - MIR SINE MIR -55 153 100 8 1805 890 138 22 0 chrX 160002412 160002550 -6647746 - B1_Mur3 SINE Alu 0 149 9 9 1805 577 391 41 38 chrX 160002599 160002939 -6647357 + LTR16B1 LTR ERVL 3 343 -137 1 1805 201 39 0 0 chrX 160003025 160003051 -6647245 + (TTG)n Simple_repeat Simple_repeat 1 26 0 1 1805 435 38 0 0 chrX 160003051 160003103 -6647193 + (GGA)n Simple_repeat Simple_repeat 2 54 0 1 1805 912 310 51 8 chrX 160003174 160003354 -6646942 - B4A SINE B4 -18 274 85 1 1805 966 18 0 0 chrX 160003354 160003466 -6646830 + (CA)n Simple_repeat Simple_repeat 2 113 0 1 1805 912 310 51 8 chrX 160003466 160003542 -6646754 - B4A SINE B4 -208 84 8 1 1805 10156 83 12 28 chrX 160003731 160005950 -6644346 + L1Md_F2 LINE L1 461 2643 -3240 1 1805 18027 66 1 0 chrX 160005945 160008390 -6641906 + L1Md_F2 LINE L1 3140 5586 -297 1 1805 8029 51 4 0 chrX 160008390 160009382 -6640914 + L1Md_F2 LINE L1 5587 6582 0 1 1805 213 39 0 0 chrX 160009501 160009527 -6640769 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1805 549 0 0 0 chrX 160009576 160009637 -6640659 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 1805 794 238 40 0 chrX 160009641 160009792 -6640504 - B3A SINE B2 -41 157 1 1 1805 182 192 19 0 chrX 160010069 160010121 -6640175 + (CAT)n Simple_repeat Simple_repeat 1 53 0 1 1805 285 314 0 47 chrX 160010135 160010242 -6640054 - MIR SINE MIR -59 203 102 2 1805 7241 87 18 12 chrX 160010666 160011808 -6638488 + Lx LINE L1 5506 6654 0 2 1805 252 0 0 0 chrX 160011905 160011933 -6638363 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 1805 257 344 50 0 chrX 160012753 160012913 -6637383 + (TCTA)n Simple_repeat Simple_repeat 2 169 0 2 1805 401 256 0 0 chrX 160012991 160013073 -6637223 + B3 SINE B2 5 86 -130 2 1805 1702 182 122 26 chrX 160013073 160013457 -6636839 + MTC LTR MaLR 1 421 0 2 1805 900 181 306 61 chrX 160013457 160013795 -6636501 + MTC-int LTR MaLR 1 421 0 2 1805 502 258 14 43 chrX 160013795 160013930 -6636366 + B3 SINE B2 80 210 -6 2 1805 1320 315 64 58 chrX 160014398 160014964 -6635332 - MER119 DNA MER1_type -3 580 12 2 1805 300 321 64 9 chrX 160014966 160015076 -6635220 - MIR SINE MIR -21 241 126 2 1805 180 274 20 0 chrX 160015156 160015207 -6635089 + L2a LINE L2 3272 3323 -103 2 1805 3017 45 3 0 chrX 160015212 160015568 -6634728 + IAPEY2_LTR LTR ERVK 1 357 0 2 1805 346 228 12 12 chrX 160015709 160015789 -6634507 + ID4_ SINE ID 2 81 -2 3 1805 254 300 30 10 chrX 160015809 160015910 -6634386 - LTR16C LTR ERVL -69 420 318 3 1805 247 276 0 33 chrX 160016255 160016315 -6633981 + B1_Mur4 SINE Alu 3 60 -90 3 1805 465 164 0 0 chrX 160016315 160016388 -6633908 + (CAGAGA)n Simple_repeat Simple_repeat 5 77 0 3 1805 242 178 112 56 chrX 160016389 160016496 -6633800 + RLTR25B LTR ERVK 397 509 -519 3 1805 743 114 0 0 chrX 160016433 160016538 -6633758 + B1_Mus2 SINE Alu 42 146 -1 3 1805 1004 71 0 14 chrX 160016838 160016981 -6633315 + (GAAA)n Simple_repeat Simple_repeat 2 142 0 3 1805 618 10 0 0 chrX 160016981 160017082 -6633214 + (GGGA)n Simple_repeat Simple_repeat 1 101 0 3 1805 305 250 0 73 chrX 160018073 160018155 -6632141 - HAL1-3A_ME LINE L1 -808 2050 1975 3 1805 211 145 31 31 chrX 160018181 160018245 -6632051 + (CAGAGA)n Simple_repeat Simple_repeat 2 65 0 3 1805 426 101 0 0 chrX 160018348 160018417 -6631879 + (TC)n Simple_repeat Simple_repeat 2 70 0 4 1805 383 245 9 93 chrX 160018417 160018525 -6631771 - B4 SINE B4 -191 101 3 4 1805 304 358 116 29 chrX 160019349 160019625 -6630671 + MLT1D LTR MaLR 126 425 -80 4 1805 2689 68 0 17 chrX 160019790 160020148 -6630148 - L1Md_F2 LINE L1 -13 6569 6218 4 1805 297 0 0 0 chrX 160020864 160020897 -6629399 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 1805 398 299 18 83 chrX 160021124 160021292 -6629004 - MER20 DNA MER1_type -19 200 44 4 1805 882 259 19 116 chrX 160021379 160021698 -6628598 + B4A SINE B4 3 290 -2 4 1805 351 0 0 0 chrX 160021726 160021765 -6628531 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1805 270 0 0 0 chrX 160021765 160021794 -6628502 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 1805 316 339 67 34 chrX 160021806 160021903 -6628393 + MLT1F LTR MaLR 39 132 -416 4 1805 269 0 0 53 chrX 160021903 160021941 -6628355 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 5 1805 316 339 67 34 chrX 160021941 160021962 -6628334 + MLT1F LTR MaLR 133 161 -387 4 1805 277 340 48 77 chrX 160023025 160023232 -6627064 - MLT1H LTR MaLR -260 289 89 5 1805 1092 209 29 0 chrX 160023491 160023697 -6626599 + B3 SINE B2 4 215 -1 5 1805 3295 179 30 14 chrX 160023720 160024364 -6625932 + RMER1A Other Other 377 1030 0 5 1805 563 305 0 21 chrX 160024439 160024583 -6625713 + RSINE1 SINE B4 2 142 -23 5 1805 495 48 0 0 chrX 160024584 160024646 -6625650 + (CATA)n Simple_repeat Simple_repeat 3 64 0 5 1805 25 0 0 0 chrX 160024650 160024675 -6625621 + AT_rich Low_complexity Low_complexity 1 25 0 5 1805 270 231 0 0 chrX 160024942 160025007 -6625289 + GA-rich Low_complexity Low_complexity 2 66 0 5 1805 507 300 45 30 chrX 160025036 160025170 -6625126 + RSINE1 SINE B4 2 137 -28 5 1805 253 288 98 71 chrX 160025170 160025219 -6625077 + B2_Mm2 SINE B2 1 188 -7 5 1805 215 206 162 14 chrX 160025931 160026005 -6624291 + MIRm SINE MIR 64 148 -128 6 1805 1510 172 60 4 chrX 160026064 160026332 -6623964 + MTD LTR MaLR 1 283 -136 6 1805 1882 104 33 78 chrX 160026392 160026726 -6623570 - ORR1A4 LTR MaLR -8 321 3 6 1805 9924 179 42 25 chrX 160026727 160028705 -6621591 + L1_Mur3 LINE L1 74 2075 -3805 6 1805 222 37 0 0 chrX 160028705 160028732 -6621564 + (CCA)n Simple_repeat Simple_repeat 1 27 0 6 1805 9924 152 37 12 chrX 160028732 160029940 -6620356 + L1_Mur3 LINE L1 2076 3326 -2554 6 1805 1220 119 0 15 chrX 160029937 160030142 -6620154 + L1_Mur3 LINE L1 3618 3819 -2061 6 1805 869 235 49 22 chrX 160030291 160030517 -6619779 + RMER1B Other Other 72 303 -763 6 1805 2593 187 12 177 chrX 160030527 160031267 -6619029 + RMER1B Other Other 174 791 -275 6 1805 3916 227 32 20 chrX 160031261 160031376 -6618920 + Lx6 LINE L1 6583 6691 -769 6 1805 546 178 0 0 chrX 160031376 160031466 -6618830 + 4.5SRNA scRNA scRNA 1 90 -4 6 1805 1424 28 57 0 chrX 160031466 160031643 -6618653 + B2_Mm2 SINE B2 2 188 -7 6 1805 3916 227 32 20 chrX 160031643 160031696 -6618600 + Lx6 LINE L1 6692 6736 -724 6 1805 317 22 0 43 chrX 160031696 160031743 -6618553 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 7 1805 3916 227 32 20 chrX 160031743 160032439 -6617857 + Lx6 LINE L1 6737 7458 -2 6 1805 288 206 16 32 chrX 160032453 160032522 -6617774 + MTD LTR MaLR 288 405 -14 6 1805 538 248 95 90 chrX 160032528 160032750 -6617546 + ORR1E LTR MaLR 13 235 -124 7 1805 360 231 21 62 chrX 160032887 160032984 -6617312 + ORR1E LTR MaLR 287 379 0 7 1805 227 217 289 0 chrX 160032988 160033071 -6617225 + PB1D9 SINE Alu 5 111 -9 7 1805 754 216 70 49 chrX 160034055 160034240 -6616056 - B3A SINE B2 -9 189 1 7 1805 486 0 0 0 chrX 160034719 160034773 -6615523 + (TA)n Simple_repeat Simple_repeat 2 55 0 7 1805 631 218 8 16 chrX 160034778 160034904 -6615392 + B1_Mur1 SINE Alu 24 148 -1 7 1805 537 286 31 26 chrX 160034971 160035165 -6615131 - B3A SINE B2 0 198 4 7 1805 1424 282 24 54 chrX 160035175 160035546 -6614750 + MTEa LTR MaLR 20 379 0 7 1805 507 268 119 7 chrX 160036479 160036622 -6613674 + RSINE1 SINE B4 2 160 -5 7 1805 366 23 0 0 chrX 160036626 160036669 -6613627 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1805 459 0 0 0 chrX 160036669 160036719 -6613577 + (GA)n Simple_repeat Simple_repeat 2 52 0 8 1805 333 289 44 0 chrX 160037073 160037163 -6613133 - MER94 DNA AcHobo -5 129 36 8 1805 207 0 0 0 chrX 160037688 160037711 -6612585 + (TG)n Simple_repeat Simple_repeat 2 24 0 8 1805 392 355 26 15 chrX 160037716 160037988 -6612308 - B4A SINE B4 -16 276 2 8 1805 500 329 7 33 chrX 160038016 160038092 -6612204 - B1F1 SINE Alu 0 149 77 8 1805 1818 207 50 14 chrX 160038092 160038450 -6611846 + ORR1D1 LTR MaLR 4 374 0 8 1805 500 329 7 33 chrX 160038450 160038524 -6611772 - B1F1 SINE Alu -73 76 3 8 1806 329 305 153 31 chrX 160038926 160039122 -6611174 + MER34A1 LTR ERV1 368 587 0 8 1806 207 156 0 0 chrX 160039148 160039180 -6611116 + C-rich Low_complexity Low_complexity 1 32 0 8 1806 523 315 42 30 chrX 160039669 160039931 -6610365 - Charlie2b DNA MER1_type -3 2779 2515 8 1806 438 20 0 0 chrX 160040010 160040061 -6610235 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 8 1806 1830 269 38 28 chrX 160040072 160040603 -6609693 - Lx8 LINE L1 -79 7394 6859 9 1806 2007 241 8 33 chrX 160040746 160041265 -6609031 - Lx8 LINE L1 -624 6849 6344 9 1806 477 108 0 0 chrX 160041265 160041330 -6608966 - MTC LTR MaLR -354 67 3 9 1806 285 282 24 16 chrX 160041457 160041583 -6608713 - Charlie2b DNA MER1_type -300 2482 2356 8 1806 279 79 0 0 chrX 160041584 160041622 -6608674 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 1806 465 345 25 25 chrX 160041686 160041888 -6608408 + MIR SINE MIR 49 250 -12 9 1806 324 0 0 0 chrX 160041967 160042003 -6608293 + (TG)n Simple_repeat Simple_repeat 2 37 0 9 1806 570 284 151 6 chrX 160042507 160042865 -6607431 + L1ME2 LINE L1 5505 5914 -250 9 1806 396 338 55 72 chrX 160042874 160043110 -6607186 - MTEa LTR MaLR -12 367 136 9 1806 1292 223 22 7 chrX 160043092 160043363 -6606933 - ORR1D1 LTR MaLR -99 275 1 9 1806 4089 207 59 12 chrX 160043478 160044304 -6605992 - ORR1D1-int LTR MaLR -314 1056 192 9 1806 315 113 18 70 chrX 160044305 160044362 -6605934 - ORR1D1 LTR MaLR -6 364 311 9 1806 3988 135 39 23 chrX 160044368 160045066 -6605230 - RMER6A LTR ERVK -6 750 42 9 1806 617 119 10 0 chrX 160045136 160045237 -6605059 + (GA)n Simple_repeat Simple_repeat 2 103 0 9 1806 328 118 0 19 chrX 160045350 160045402 -6604894 - RMER6A LTR ERVK -410 51 1 9 1806 1080 245 88 44 chrX 160045402 160045696 -6604600 - ORR1D1 LTR MaLR -58 312 5 9 1806 249 312 70 12 chrX 160045757 160045929 -6604367 + L1ME2 LINE L1 5953 6134 -30 9 1806 3662 275 53 67 chrX 160045939 160047398 -6602898 + Lx5 LINE L1 5595 7032 -18 1 1806 645 14 0 0 chrX 160047412 160047486 -6602810 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 1 1806 447 333 26 62 chrX 160048557 160048752 -6601544 + MTE2a LTR MaLR 1 188 -191 1 1806 7981 40 1 1 chrX 160048789 160050104 -6600192 - L1Md_F2 LINE L1 0 6582 5269 1 1806 481 158 40 81 chrX 160050130 160050254 -6600042 + MTE2a LTR MaLR 260 378 -1 1 1806 192 333 139 0 chrX 160050305 160050413 -6599883 - MIR SINE MIR -89 173 51 1 1806 939 164 0 0 chrX 160050840 160051011 -6599285 + (TAGA)n Simple_repeat Simple_repeat 4 174 0 1 1806 324 242 0 0 chrX 160051012 160051074 -6599222 + (CAGG)n Simple_repeat Simple_repeat 4 65 0 1 1806 1447 276 31 29 chrX 160051075 160051658 -6598638 - L1MA4 LINE L1 -379 5921 5338 1 1806 209 176 39 19 chrX 160052147 160052199 -6598097 + GA-rich Low_complexity Low_complexity 2 54 0 1 1806 874 83 15 0 chrX 160052202 160052335 -6597961 + (GGGAGA)n Simple_repeat Simple_repeat 2 136 0 1 1806 605 305 126 4 chrX 160052366 160052613 -6597683 + B4A SINE B4 2 278 -14 1 1806 498 33 0 0 chrX 160052620 160052680 -6597616 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 1806 467 221 9 63 chrX 160053619 160053730 -6596566 + ID_B1 SINE B4 110 214 -10 1 1806 579 29 0 0 chrX 160053730 160053799 -6596497 + (ATATG)n Simple_repeat Simple_repeat 2 70 0 1 1806 363 367 71 19 chrX 160054767 160054978 -6595318 - MIR SINE MIR -10 252 31 1 1806 393 22 0 0 chrX 160055177 160055223 -6595073 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 1806 421 277 115 0 chrX 160055716 160055846 -6594450 + B1F1 SINE Alu 1 145 -4 1 1806 318 248 29 76 chrX 160056279 160056384 -6593912 + LTR48 LTR ERV1 3 102 -542 1 1806 615 263 65 54 chrX 160056604 160056881 -6593415 + LTR48 LTR ERV1 467 746 -41 1 1806 495 248 6 162 chrX 160057148 160057321 -6592975 - B1F SINE Alu -1 148 3 1 1806 544 269 17 0 chrX 160057506 160057625 -6592671 + RSINE1 SINE B4 23 143 -22 1 1806 369 0 0 0 chrX 160057724 160057765 -6592531 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1806 567 288 158 6 chrX 160057987 160058316 -6591980 + Lx7 LINE L1 6957 7335 -361 1 1806 545 186 0 176 chrX 160058359 160058452 -6591844 - B1_Mur2 SINE Alu 0 149 76 1 1806 333 0 0 0 chrX 160058452 160058489 -6591807 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1806 545 186 0 176 chrX 160058489 160058571 -6591725 - B1_Mur2 SINE Alu -74 75 5 1 1806 329 67 0 0 chrX 160058726 160058771 -6591525 - L1Md_T LINE L1 -724 5858 5814 1 1806 526 87 0 52 chrX 160058771 160058868 -6591428 + L1Md_F2 LINE L1 6491 6582 0 1 1806 249 222 0 0 chrX 160058874 160058928 -6591368 + A-rich Low_complexity Low_complexity 1 54 0 1 1806 821 167 0 40 chrX 160059327 160059477 -6590819 + B1_Mus1 SINE Alu 3 146 -2 1 1806 886 236 43 24 chrX 160059508 160059716 -6590580 + B3 SINE B2 2 213 -3 1 1806 820 202 117 20 chrX 160059716 160059913 -6590383 + B3 SINE B2 1 216 0 1 1806 323 182 13 0 chrX 160059915 160059992 -6590304 + GA-rich Low_complexity Low_complexity 1 78 0 1 1806 23 33 0 0 chrX 160060111 160060141 -6590155 + AT_rich Low_complexity Low_complexity 1 30 0 1 1806 290 311 110 28 chrX 160060213 160060322 -6589974 + PB1D7 SINE Alu 10 127 0 1 1806 432 71 43 86 chrX 160060462 160060555 -6589741 - L1Md_A LINE L1 -2 6580 6492 1 1806 4786 9 2 0 chrX 160060622 160061191 -6589105 + L1_Mm LINE L1 4804 5373 -510 1 1806 4653 133 50 15 chrX 160061400 160062363 -6587933 - Lx2 LINE L1 -352 6645 5902 1 1806 726 265 4 57 chrX 160062366 160062594 -6587702 - ID_B1 SINE B4 -7 217 2 1 1806 330 292 158 82 chrX 160062875 160063193 -6587103 + MLT1H LTR MaLR 100 442 -137 1 1806 917 116 7 0 chrX 160063289 160063444 -6586852 + (TC)n Simple_repeat Simple_repeat 1 156 0 1 1806 294 95 0 0 chrX 160063444 160063485 -6586811 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1806 927 232 7 162 chrX 160063485 160063680 -6586616 - B4 SINE B4 -31 261 81 1 1806 598 182 161 19 chrX 160063680 160063842 -6586454 - B2_Mm2 SINE B2 -10 185 1 1 1806 927 232 7 162 chrX 160063842 160063955 -6586341 - B4 SINE B4 -212 80 1 1 1806 822 272 9 9 chrX 160064354 160064573 -6585723 + Lx6 LINE L1 7216 7434 -26 1 1806 370 282 0 25 chrX 160064865 160064945 -6585351 + RSINE1 SINE B4 4 81 -84 1 1806 211 200 0 0 chrX 160065419 160065469 -6584827 + T-rich Low_complexity Low_complexity 3 52 0 1 1806 771 290 0 54 chrX 160065513 160065717 -6584579 - B3A SINE B2 0 198 6 1 1806 388 244 61 143 chrX 160065844 160066074 -6584222 + L1MC5 LINE L1 7711 7921 -40 1 1806 181 247 12 12 chrX 160066107 160066189 -6584107 + GA-rich Low_complexity Low_complexity 1 82 0 1 1806 420 280 193 9 chrX 160066240 160066443 -6583853 - MLT1D LTR MaLR -19 486 162 1 1806 516 290 28 48 chrX 160066488 160066633 -6583663 - ID_B1 SINE B4 -4 220 79 1 1806 328 246 109 76 chrX 160066648 160066767 -6583529 - MLT1D LTR MaLR -339 128 6 1 1806 473 263 7 36 chrX 160067297 160067435 -6582861 - RMER15 LTR ERVL -16 559 426 1 1806 265 350 0 8 chrX 160067629 160067747 -6582549 - Lx8 LINE L1 -323 7150 7034 1 1806 210 246 48 16 chrX 160067792 160067854 -6582442 - L2 LINE L2 -662 2757 2694 1 1806 586 269 44 13 chrX 160068952 160069110 -6581186 - MER58A DNA MER1_type -8 216 54 1 1806 1193 239 154 55 chrX 160069538 160070251 -6580045 - LTR48 LTR ERV1 0 787 4 1 1806 383 349 39 13 chrX 160070370 160070524 -6579772 + MER45A DNA Tip100 1 158 -20 1 1806 224 333 0 45 chrX 160071203 160071291 -6579005 + B4A SINE B4 2 85 -207 1 1806 369 0 0 0 chrX 160071445 160071486 -6578810 + (TTA)n Simple_repeat Simple_repeat 3 43 0 1 1806 266 231 0 0 chrX 160071533 160071585 -6578711 + ID_B1 SINE B4 173 224 0 1 1806 489 271 25 0 chrX 160071801 160071919 -6578377 - ID_B1 SINE B4 -2 222 102 1 1806 332 324 73 7 chrX 160071919 160071938 -6578358 - B1F1 SINE Alu -1 148 3 1 1806 705 203 15 23 chrX 160071975 160072128 -6578168 - B1_Mur3 SINE Alu -8 141 1 1 1806 296 329 0 0 chrX 160072383 160072465 -6577831 - MER34 LTR ERV1 -93 449 368 1 1806 314 266 0 0 chrX 160072503 160072567 -6577729 - B1F SINE Alu -8 141 78 1 1806 396 0 0 0 chrX 160073018 160073062 -6577234 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1806 1902 69 48 7 chrX 160073062 160073355 -6576941 + RLTR44D LTR ERVK 175 479 -7 1 1806 279 104 0 0 chrX 160073408 160073456 -6576840 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1806 310 377 63 9 chrX 160073599 160073821 -6576475 + L1M5 LINE L1 4787 5020 -1126 1 1806 333 301 0 28 chrX 160073932 160074038 -6576258 + MER5B DNA MER1_type 4 106 -72 1 1806 239 357 88 52 chrX 160074093 160074229 -6576067 - MamGypLTR2b LTR Gypsy -615 307 167 1 1806 226 217 0 0 chrX 160074335 160074381 -6575915 + L1MD2 LINE L1 6075 6120 -239 1 1806 609 255 6 30 chrX 160074393 160074559 -6575737 + RSINE1 SINE B4 4 165 0 1 1806 197 65 32 0 chrX 160074561 160074592 -6575704 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1 1806 1345 286 70 36 chrX 160075175 160075643 -6574653 - MLT2B4 LTR ERVL -72 484 1 1 1806 648 70 0 0 chrX 160076034 160076120 -6574176 + (TTTC)n Simple_repeat Simple_repeat 4 89 0 1 1806 815 339 0 22 chrX 160076213 160076445 -6573851 + B4A SINE B4 4 230 -62 1 1806 845 73 0 0 chrX 160076886 160076995 -6573301 - ORR1A3 LTR MaLR -8 318 210 1 1806 511 309 111 28 chrX 160077043 160077296 -6573000 + MLT1E1A LTR MaLR 284 557 -123 1 1806 411 147 53 13 chrX 160077298 160077374 -6572922 + B1_Mur2 SINE Alu 71 149 0 1 1806 251 294 22 138 chrX 160077385 160077523 -6572773 + MLT1E1A LTR MaLR 523 644 -10 1 1806 1050 78 14 21 chrX 160077533 160077677 -6572619 + B1_Mm SINE Alu 2 144 -3 1 1806 993 113 0 0 chrX 160077677 160077827 -6572469 + (GAA)n Simple_repeat Simple_repeat 2 151 0 1 1806 351 0 0 0 chrX 160078427 160078466 -6571830 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1806 3540 288 31 13 chrX 160078466 160079530 -6570766 - Lx8 LINE L1 -146 7327 6245 1 1806 190 430 43 9 chrX 160079790 160079905 -6570391 - L2b LINE L2 0 3375 3257 1 1806 249 224 71 43 chrX 160080041 160080111 -6570185 - MLT1A1 LTR MaLR -16 392 321 1 1806 25 0 0 0 chrX 160080373 160080398 -6569898 + AT_rich Low_complexity Low_complexity 1 25 0 1 1806 229 321 0 0 chrX 160080580 160080661 -6569635 - Lx7 LINE L1 -395 7301 7221 1 1806 264 59 0 0 chrX 160081466 160081500 -6568796 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1806 307 323 112 8 chrX 160081608 160081742 -6568554 + B1F1 SINE Alu 1 148 -1 1 1806 372 147 0 0 chrX 160082643 160082718 -6567578 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 1 1806 24 32 0 0 chrX 160083433 160083464 -6566832 + AT_rich Low_complexity Low_complexity 1 31 0 1 1806 408 40 0 0 chrX 160083701 160083751 -6566545 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1806 225 253 146 10 chrX 160084086 160084182 -6566114 - MER34A LTR ERV1 -11 576 468 1 1806 729 160 329 17 chrX 160084190 160084424 -6565872 - MTC LTR MaLR -8 413 107 1 1806 1258 34 0 0 chrX 160084424 160084570 -6565726 + B1_Mus2 SINE Alu 1 146 -1 1 1806 282 160 0 0 chrX 160084571 160084621 -6565675 + A-rich Low_complexity Low_complexity 1 50 0 1 1806 399 111 0 0 chrX 160084622 160084676 -6565620 - MTC LTR MaLR -302 119 66 1 1806 658 82 0 0 chrX 160084681 160084766 -6565530 - B1_Mur4 SINE Alu -13 137 53 1 1806 374 149 200 84 chrX 160084733 160084828 -6565468 - MTC LTR MaLR -315 106 1 1 1806 319 315 128 64 chrX 160084975 160085209 -6565087 - MER34A LTR ERV1 -328 259 11 1 1806 890 249 34 19 chrX 160085241 160085446 -6564850 - B3 SINE B2 0 216 9 1 1806 242 139 47 0 chrX 160085863 160085906 -6564390 + Charlie2b DNA MER1_type 531 575 -2207 1 1806 331 291 58 11 chrX 160086297 160086405 -6563891 + PB1D7 SINE Alu 1 112 -8 1 1806 207 0 0 0 chrX 160086405 160086428 -6563868 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 1806 325 335 84 55 chrX 160087455 160087766 -6562530 + LTR16C LTR ERVL 173 500 -38 2 1806 191 265 153 24 chrX 160087895 160087980 -6562316 - MER5A DNA MER1_type -25 164 69 2 1806 197 196 20 0 chrX 160088003 160088054 -6562242 + CT-rich Low_complexity Low_complexity 4 55 0 2 1806 231 329 14 14 chrX 160088189 160088260 -6562036 - MER5A DNA MER1_type -110 79 9 2 1806 914 226 33 0 chrX 160088274 160088455 -6561841 + B3 SINE B2 3 189 -27 2 1806 702 256 22 62 chrX 160088492 160088717 -6561579 + B3 SINE B2 1 216 0 2 1806 723 162 0 169 chrX 160088915 160089093 -6561203 - B1_Mur2 SINE Alu -1 148 1 2 1806 25 65 0 0 chrX 160089682 160089728 -6560568 + AT_rich Low_complexity Low_complexity 1 46 0 2 1806 821 261 0 33 chrX 160089741 160089951 -6560345 + B3 SINE B2 1 203 -13 2 1806 229 278 83 0 chrX 160090146 160090218 -6560078 + ID4 SINE ID 2 79 -4 2 1806 549 248 0 0 chrX 160090851 160090964 -6559332 - ID_B1 SINE B4 -8 216 104 2 1806 324 0 0 0 chrX 160091008 160091044 -6559252 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1806 369 0 0 0 chrX 160091044 160091084 -6559212 + (GA)n Simple_repeat Simple_repeat 1 41 0 2 1806 25 0 0 0 chrX 160091253 160091278 -6559018 + AT_rich Low_complexity Low_complexity 1 25 0 2 1806 530 358 69 54 chrX 160091417 160091807 -6558489 - MLT1J LTR MaLR -47 465 70 2 1806 427 234 42 78 chrX 160091996 160092392 -6557904 + Lx5 LINE L1 5778 6142 -1331 2 1806 594 259 68 106 chrX 160092397 160092558 -6557738 + B3A SINE B2 36 190 -5 2 1806 22 35 0 0 chrX 160092576 160092605 -6557691 + AT_rich Low_complexity Low_complexity 1 29 0 2 1806 233 20 19 75 chrX 160093523 160093576 -6556720 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 2 1806 1055 217 11 0 chrX 160093583 160093767 -6556529 + B3 SINE B2 3 188 -28 2 1806 798 62 0 0 chrX 160093768 160093881 -6556415 + (CA)n Simple_repeat Simple_repeat 1 113 0 2 1806 694 291 139 47 chrX 160094205 160094674 -6555622 - MT2A LTR ERVL -18 515 4 2 1806 241 188 174 0 chrX 160094740 160094809 -6555487 + ID4 SINE ID 2 82 -1 2 1806 192 125 0 0 chrX 160094812 160094844 -6555452 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2 1806 450 289 45 30 chrX 160095122 160095254 -6555042 + RSINE1 SINE B4 1 134 -31 2 1806 319 301 10 10 chrX 160096118 160096222 -6554074 + PB1D10 SINE Alu 5 108 -9 2 1806 291 28 0 0 chrX 160096479 160096515 -6553781 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1806 623 342 75 41 chrX 160096516 160096980 -6553316 + L2a LINE L2 2517 2996 -423 2 1806 420 20 0 0 chrX 160097239 160097288 -6553008 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1806 229 361 55 39 chrX 160097451 160097578 -6552718 + L2a LINE L2 3290 3418 -8 2 1806 640 256 65 6 chrX 160098428 160098597 -6551699 - B3A SINE B2 -18 180 2 2 1806 1556 57 0 0 chrX 160098628 160098820 -6551476 - B2_Mm1a SINE B2 0 193 2 2 1806 593 260 89 0 chrX 160098904 160099050 -6551246 - MER58A DNA MER1_type -57 167 9 2 1806 477 0 0 0 chrX 160099079 160099132 -6551164 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1806 421 237 0 0 chrX 160100537 160100613 -6549683 + RSINE1 SINE B4 2 77 -88 2 1806 448 310 45 74 chrX 160100971 160101173 -6549123 + MER20 DNA MER1_type 1 196 -23 2 1806 319 330 21 21 chrX 160101176 160101269 -6549027 + B3A SINE B2 41 133 -65 2 1806 375 23 0 0 chrX 160101300 160101344 -6548952 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1806 369 218 140 54 chrX 160102234 160102376 -6547920 - MLT1E3 LTR MaLR -133 520 335 2 1806 216 344 76 93 chrX 160102490 160103028 -6547268 + L3 LINE CR1 3624 4152 -337 2 1806 1544 222 106 0 chrX 160103217 160103596 -6546700 - MTD LTR MaLR 0 419 1 2 1806 435 19 0 0 chrX 160103598 160103650 -6546646 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1806 247 290 43 71 chrX 160104094 160104235 -6546061 + MLT1J2 LTR MaLR 307 443 -5 2 1806 27 49 0 0 chrX 160104302 160104343 -6545953 + AT_rich Low_complexity Low_complexity 1 41 0 2 1806 446 49 16 0 chrX 160104344 160104405 -6545891 + (CATA)n Simple_repeat Simple_repeat 2 63 0 2 1806 2763 256 85 28 chrX 160104604 160104977 -6545319 + Lx8 LINE L1 6465 6859 -614 2 1806 2194 0 0 0 chrX 160104977 160105220 -6545076 - L1Md_T LINE L1 0 6582 6340 2 1806 2763 256 85 28 chrX 160105220 160105677 -6544619 + Lx8 LINE L1 6860 7351 -122 2 1806 366 23 0 0 chrX 160105677 160105720 -6544576 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 1806 2763 256 85 28 chrX 160105720 160105819 -6544477 + Lx8 LINE L1 7352 7447 -26 2 1806 1171 261 7 4 chrX 160105884 160106153 -6544143 + MER2 DNA MER2_type 73 342 -3 2 1806 1650 243 70 109 chrX 160106296 160106513 -6543783 + L1MB8 LINE L1 5239 5467 -711 2 1806 306 0 0 0 chrX 160106513 160106547 -6543749 + (TAA)n Simple_repeat Simple_repeat 1 34 0 2 1806 1650 241 69 124 chrX 160106547 160106837 -6543459 + L1MB8 LINE L1 5468 5710 -468 2 1806 1277 173 5 0 chrX 160106837 160107057 -6543239 - URR1B DNA MER1_type 0 225 5 2 1806 1650 241 69 124 chrX 160107057 160107539 -6542757 + L1MB8 LINE L1 5711 6176 -2 2 1806 313 170 0 19 chrX 160107827 160107881 -6542415 + B3A SINE B2 52 104 -94 2 1806 207 150 50 0 chrX 160107881 160107941 -6542355 + GA-rich Low_complexity Low_complexity 2 64 0 2 1806 543 217 57 0 chrX 160107990 160108096 -6542200 + B3 SINE B2 105 216 0 2 1806 414 101 0 0 chrX 160108648 160108717 -6541579 + (CA)n Simple_repeat Simple_repeat 2 70 0 2 1806 563 307 81 59 chrX 160109279 160109722 -6540574 - L1MC4 LINE L1 -374 7668 7216 2 1806 1116 226 259 16 chrX 160109767 160110281 -6540015 + Lx9 LINE L1 7000 7638 -6 2 1806 498 229 65 8 chrX 160111159 160111282 -6539014 - MTC LTR MaLR 0 421 292 2 1806 429 341 12 6 chrX 160111852 160112023 -6538273 - Lx8 LINE L1 -151 7322 7151 2 1806 1199 276 24 14 chrX 160112057 160112428 -6537868 - Lx8 LINE L1 -322 7151 6777 2 1806 1462 48 0 5 chrX 160112499 160112689 -6537607 - L1Md_F2 LINE L1 -15 6569 6381 2 1806 4344 37 0 0 chrX 160112686 160113195 -6537101 - L1Md_T LINE L1 0 6582 6074 2 1806 294 95 0 0 chrX 160113195 160113237 -6537059 + L1Md_F3 LINE L1 6038 6079 -505 2 1806 4437 54 2 2 chrX 160113227 160113804 -6536492 - L1Md_F2 LINE L1 -188 6394 5818 2 1806 717 321 58 37 chrX 160113806 160114100 -6536196 + LTR40a LTR ERVL 163 462 -57 2 1806 782 258 79 36 chrX 160114254 160114532 -6535764 - B4A SINE B4 0 292 3 2 1806 450 36 0 0 chrX 160115067 160115123 -6535173 + (GA)n Simple_repeat Simple_repeat 2 57 0 2 1806 22 0 0 0 chrX 160115761 160115783 -6534513 + AT_rich Low_complexity Low_complexity 1 22 0 2 1806 755 321 21 39 chrX 160115794 160116076 -6534220 + B4A SINE B4 2 278 -14 2 1806 357 24 0 0 chrX 160116108 160116150 -6534146 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1806 247 393 55 34 chrX 160116237 160116383 -6533913 - L2c LINE L2 -13 3362 3220 2 1806 601 145 165 136 chrX 160118032 160118105 -6532191 + B2_Mm2 SINE B2 1 50 -145 2 1806 882 112 61 24 chrX 160118105 160118270 -6532026 - Lx3B LINE L1 -5 6968 6798 2 1806 601 145 165 136 chrX 160118270 160118372 -6531924 + B2_Mm2 SINE B2 51 181 -14 2 1806 846 218 16 32 chrX 160118842 160119027 -6531269 + B3A SINE B2 2 183 -15 2 1806 26 0 0 0 chrX 160119057 160119083 -6531213 + AT_rich Low_complexity Low_complexity 1 26 0 2 1806 708 301 60 123 chrX 160119212 160119610 -6530686 + MLT1F2 LTR MaLR 9 381 -179 2 1806 557 263 51 112 chrX 160119706 160119920 -6530376 - RMER15 LTR ERVL -4 571 371 2 1806 537 260 13 13 chrX 160120991 160121143 -6529153 + Lx9 LINE L1 7133 7284 -360 2 1806 252 0 0 0 chrX 160121189 160121217 -6529079 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 1806 466 304 99 5 chrX 160122094 160122296 -6528000 + ID_B1 SINE B4 2 222 -2 2 1806 343 341 24 8 chrX 160122348 160122472 -6527824 + B1F SINE Alu 24 149 0 2 1806 304 167 72 43 chrX 160122475 160122544 -6527752 + ID4_ SINE ID 3 73 -10 2 1806 234 250 73 66 chrX 160123094 160123231 -6527065 + YREP_Mm Unknown Unknown 157 294 -1518 2 1806 502 243 51 14 chrX 160123109 160123128 -6527168 - B1F1 SINE Alu 0 149 7 2 1806 590 203 8 8 chrX 160123128 160123247 -6527049 - ID_B1 SINE B4 -18 206 88 2 1806 390 21 0 0 chrX 160123273 160123320 -6526976 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2 1806 3693 89 6 0 chrX 160123320 160123815 -6526481 - Lx3A LINE L1 -13 6968 6471 2 1806 287 224 35 0 chrX 160123917 160123975 -6526321 + ID_B1 SINE B4 159 218 -6 2 1806 375 333 88 14 chrX 160124020 160124236 -6526060 + MIRb SINE MIR 24 255 -13 2 1806 461 306 16 0 chrX 160124256 160124377 -6525919 - Tigger5 DNA MER2_type 0 2406 2284 2 1806 585 261 88 19 chrX 160124380 160124540 -6525756 - Tigger5 DNA MER2_type -2176 230 60 2 1806 203 325 79 43 chrX 160124679 160124843 -6525453 + MIR3 SINE MIR 37 206 -2 2 1806 396 361 76 29 chrX 160124951 160125122 -6525174 - MER63A DNA AcHobo -31 179 1 2 1806 771 272 6 110 chrX 160125184 160125510 -6524786 + B4 SINE B4 1 292 0 2 1806 542 52 26 0 chrX 160125571 160125648 -6524648 + (CAGAGA)n Simple_repeat Simple_repeat 2 80 0 2 1806 238 313 161 21 chrX 160126069 160126255 -6524041 + Tigger15a DNA TcMar 126 337 -378 2 1806 555 259 115 57 chrX 160126604 160126813 -6523483 + ID_B1 SINE B4 2 222 -2 2 1806 800 214 63 72 chrX 160126887 160127094 -6523202 + B3 SINE B2 9 213 -3 2 1806 322 330 123 0 chrX 160127124 160127230 -6523066 + LTR16A1 LTR ERVL 7 125 -331 2 1806 404 49 15 103 chrX 160127481 160127549 -6522747 + B1_Mur4 SINE Alu 86 147 -3 2 1806 486 33 0 0 chrX 160127549 160127609 -6522687 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 1806 277 275 0 0 chrX 160127629 160127698 -6522598 + MERVL_2A-int LTR ERVL 719 787 -4974 2 1806 915 138 0 0 chrX 160127740 160127892 -6522404 + (TC)n Simple_repeat Simple_repeat 1 152 0 2 1806 559 250 28 28 chrX 160127892 160128036 -6522260 + ORR1D1 LTR MaLR 231 374 0 2 1806 2673 36 15 0 chrX 160128036 160128328 -6521968 - ORR1A1 LTR MaLR -49 297 1 3 1806 443 299 86 0 chrX 160128355 160128472 -6521824 + B3A SINE B2 1 127 -71 3 1806 537 311 13 19 chrX 160128463 160128617 -6521679 + ID_B1 SINE B4 58 210 -14 3 1806 298 197 0 15 chrX 160128662 160128729 -6521567 + L1MEc LINE L1 830 895 -5568 3 1806 232 315 55 0 chrX 160128778 160128924 -6521372 + L1MEc LINE L1 1080 1233 -5230 3 1806 523 283 8 8 chrX 160128957 160129078 -6521218 + ID_B1 SINE B4 99 219 -5 3 1806 226 204 61 0 chrX 160129034 160129083 -6521213 + PB1D10 SINE Alu 66 117 0 3 1806 680 333 0 0 chrX 160129089 160129260 -6521036 + B3A SINE B2 1 171 -27 3 1806 513 0 0 0 chrX 160129263 160129320 -6520976 + (TC)n Simple_repeat Simple_repeat 1 57 0 3 1806 198 0 0 0 chrX 160129320 160129341 -6520955 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 1806 1045 198 19 19 chrX 160129369 160129585 -6520711 + B3 SINE B2 1 216 0 3 1806 400 250 49 94 chrX 160129597 160129737 -6520559 + L1MEc LINE L1 1246 1384 -5079 3 1806 1300 86 21 11 chrX 160129737 160129925 -6520371 + B2_Mm2 SINE B2 1 190 -5 3 1806 400 290 102 74 chrX 160129925 160130091 -6520205 + L1MEc LINE L1 1328 1512 -4872 3 1806 296 179 0 0 chrX 160130130 160130186 -6520110 + L1MEc LINE L1 1643 1698 -4780 3 1806 252 336 49 35 chrX 160130224 160130418 -6519878 + MLT1C LTR MaLR 122 396 -71 3 1806 243 0 0 0 chrX 160130429 160130456 -6519840 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 3 1806 654 253 13 7 chrX 160130520 160130675 -6519621 - RSINE1 SINE B4 -7 158 3 3 1806 636 245 58 0 chrX 160130681 160130820 -6519476 - B1F SINE Alu -2 147 1 3 1806 255 241 0 17 chrX 160130822 160130881 -6519415 + MLT1C LTR MaLR 405 462 -5 3 1806 317 269 13 0 chrX 160130999 160131077 -6519219 + MamRep605 Unknown Unknown 686 764 -112 3 1806 353 210 0 0 chrX 160131280 160131342 -6518954 + ID4_ SINE ID 12 73 -10 3 1806 307 284 18 73 chrX 160131342 160131390 -6518906 + ID_B1 SINE B4 12 115 -109 3 1806 638 279 0 0 chrX 160131578 160131707 -6518589 + RSINE1 SINE B4 4 132 -33 3 1806 342 0 0 0 chrX 160131721 160131759 -6518537 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1806 290 29 103 0 chrX 160132065 160132133 -6518163 + (TA)n Simple_repeat Simple_repeat 2 76 0 3 1806 489 258 43 125 chrX 160132137 160132298 -6517998 + L1MB2 LINE L1 5448 5608 -575 3 1806 274 323 71 0 chrX 160132298 160132397 -6517899 + PB1 SINE Alu 3 108 -19 3 1806 489 258 43 125 chrX 160132397 160132514 -6517782 + L1MB2 LINE L1 5609 5703 -480 3 1806 482 46 15 0 chrX 160132565 160132630 -6517666 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 3 1806 870 109 115 42 chrX 160132686 160132878 -6517418 + Lx LINE L1 6447 6652 -2 3 1806 1299 202 97 12 chrX 160132972 160133303 -6516993 + Lx3C LINE L1 6616 6974 -2 3 1806 601 231 62 27 chrX 160133296 160133430 -6516866 + L1MB2 LINE L1 5793 5934 -237 3 1806 639 64 0 11 chrX 160133430 160133525 -6516771 + L1_Mus2 LINE L1 6472 6565 -1 3 1806 601 280 99 48 chrX 160133525 160133744 -6516552 + L1MB2 LINE L1 5935 6164 -7 3 1806 652 308 83 36 chrX 160133902 160133923 -6516373 + Lx8 LINE L1 7087 7107 -366 3 1806 1928 49 0 16 chrX 160133923 160134170 -6516126 + L1_Mus2 LINE L1 6324 6566 0 3 1806 652 308 83 36 chrX 160134170 160134508 -6515788 + Lx8 LINE L1 7108 7462 -11 3 1806 243 319 176 12 chrX 160134609 160134774 -6515522 + Lx8 LINE L1 7033 7224 -249 3 1806 239 300 0 0 chrX 160134833 160134893 -6515403 + Lx8 LINE L1 7161 7220 -253 3 1806 458 270 149 0 chrX 160134898 160135046 -6515250 + RMER15 LTR ERVL 393 562 -13 3 1806 250 229 12 24 chrX 160135048 160135133 -6515163 + L1MEc LINE L1 2065 2148 -4252 3 1806 28 0 0 0 chrX 160135304 160135332 -6514964 + AT_rich Low_complexity Low_complexity 1 28 0 3 1806 595 184 281 6 chrX 160135495 160135659 -6514637 - B3 SINE B2 -7 209 1 3 1806 607 344 104 29 chrX 160135677 160136177 -6514119 + MLT1E LTR MaLR 12 599 -54 3 1806 249 302 83 44 chrX 160136183 160136731 -6513565 + L1MEc LINE L1 2322 2892 -3427 3 1806 615 51 0 0 chrX 160136842 160136921 -6513375 + (GA)n Simple_repeat Simple_repeat 1 79 0 3 1806 444 268 50 19 chrX 160136927 160137056 -6513240 - RSINE1 SINE B4 -20 145 3 3 1806 1331 203 73 28 chrX 160137633 160137987 -6512309 - ORR1D2 LTR MaLR 0 370 1 3 1806 306 130 0 0 chrX 160138251 160138297 -6511999 + MLT2B3 LTR ERVL 1 46 -508 3 1806 506 258 77 26 chrX 160138302 160138457 -6511839 + RSINE1 SINE B4 3 165 0 3 1806 271 217 17 0 chrX 160138457 160138517 -6511779 + (CA)n Simple_repeat Simple_repeat 1 61 0 3 1806 35 0 0 0 chrX 160138517 160138552 -6511744 + AT_rich Low_complexity Low_complexity 1 35 0 3 1806 801 233 195 11 chrX 160138558 160138819 -6511477 + MTEb LTR MaLR 69 377 -2 3 1806 649 287 0 47 chrX 160138993 160139165 -6511131 + RSINE1 SINE B4 2 165 0 3 1806 639 180 57 81 chrX 160139256 160139467 -6510829 + Lx7 LINE L1 7491 7696 0 3 1806 892 78 31 38 chrX 160139683 160139842 -6510454 - Lx LINE L1 0 6654 6497 3 1806 3303 92 43 2 chrX 160139844 160140439 -6509857 + L1_Mus4 LINE L1 5336 5946 -690 3 1806 1365 279 45 38 chrX 160141585 160142028 -6508268 + Lx5 LINE L1 6600 7045 -5 3 1806 643 221 86 40 chrX 160142290 160142464 -6507832 + B3A SINE B2 1 182 -16 3 1806 687 228 7 35 chrX 160142553 160142694 -6507602 + B1_Mur2 SINE Alu 2 138 -11 3 1806 594 0 0 0 chrX 160142705 160142771 -6507525 + (TAAA)n Simple_repeat Simple_repeat 2 67 0 3 1806 979 261 85 48 chrX 160143252 160143606 -6506690 + ORR1D2 LTR MaLR 1 367 -3 3 1806 602 221 58 70 chrX 160143760 160144027 -6506269 - L1MA4 LINE L1 -364 5936 5638 3 1806 394 38 0 0 chrX 160144027 160144080 -6506216 + L1_Mus2 LINE L1 6514 6566 0 3 1806 601 228 57 112 chrX 160144080 160144136 -6506160 - L1MA4 LINE L1 -2059 5637 5588 3 1806 1279 59 18 0 chrX 160144160 160144329 -6505967 - L1_Mus1 LINE L1 0 6567 6396 3 1806 1522 212 57 31 chrX 160144704 160145055 -6505241 - ORR1D2 LTR MaLR -8 362 3 3 1806 563 244 70 37 chrX 160145411 160145434 -6504862 + CYRA11_Mm Unknown Y-chromosome 153 181 -436 3 1806 1327 120 53 5 chrX 160145434 160145643 -6504653 - URR1B DNA MER1_type 0 225 7 3 1806 1305 227 121 12 chrX 160146314 160146644 -6503652 + ORR1D1 LTR MaLR 1 366 -8 3 1806 792 240 41 0 chrX 160146648 160146819 -6503477 + B3 SINE B2 39 216 0 3 1806 403 291 35 35 chrX 160147056 160147170 -6503126 + B3A SINE B2 90 203 -13 3 1806 242 250 0 16 chrX 160147170 160147231 -6503065 + (CATATA)n Simple_repeat Simple_repeat 5 64 0 3 1806 25 75 0 0 chrX 160147345 160147398 -6502898 + AT_rich Low_complexity Low_complexity 1 53 0 3 1806 992 45 23 0 chrX 160147706 160147838 -6502458 - L1_Mus2 LINE L1 0 6566 6432 3 1806 954 74 0 173 chrX 160147866 160148045 -6502251 - B1_Mus1 SINE Alu 0 148 1 3 1806 509 273 6 64 chrX 160149162 160149251 -6501045 + B4A SINE B4 1 79 -213 3 1806 248 310 32 79 chrX 160149251 160149377 -6500919 + PB1D9 SINE Alu 1 120 0 3 1806 186 103 0 0 chrX 160149465 160149494 -6500802 + (GGGA)n Simple_repeat Simple_repeat 1 29 0 3 1806 477 0 0 0 chrX 160149557 160149610 -6500686 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1806 500 242 0 0 chrX 160149636 160149731 -6500565 - B3A SINE B2 -103 95 1 3 1806 1283 282 59 16 chrX 160150210 160150700 -6499596 + RMER5 LTR ERV1 24 534 0 3 1806 354 225 0 12 chrX 160150753 160150835 -6499461 + PB1 SINE Alu 28 101 -19 3 1806 234 370 0 14 chrX 160150837 160150911 -6499385 + MLT1F2 LTR MaLR 436 508 -52 3 1806 1259 176 9 0 chrX 160151405 160151626 -6498670 - URR1A DNA MER1_type -3 223 1 3 1806 1467 239 138 3 chrX 160151820 160152176 -6498120 + MTD LTR MaLR 1 404 -15 3 1806 349 331 127 71 chrX 160152193 160152476 -6497820 - MLT1A LTR MaLR -44 330 32 3 1806 592 259 14 0 chrX 160152643 160152790 -6497506 - RSINE1 SINE B4 -15 150 2 3 1806 255 188 0 40 chrX 160152870 160152920 -6497376 + B3 SINE B2 85 132 -84 3 1806 374 249 13 57 chrX 160152983 160153092 -6497204 + B1_Mur2 SINE Alu 32 141 -8 3 1806 498 108 0 0 chrX 160153095 160153169 -6497127 + (TGG)n Simple_repeat Simple_repeat 1 74 0 3 1806 281 28 0 0 chrX 160153315 160153351 -6496945 + RLTR10B2 LTR ERVK 1 36 -256 3 1806 2180 78 84 43 chrX 160153350 160153697 -6496599 + RLTR10B2 LTR ERVK 5 365 0 3 1806 383 360 119 35 chrX 160153705 160153880 -6496416 - L2 LINE L2 -339 3080 2901 3 1806 2358 89 3 9 chrX 160153880 160154208 -6496088 + ORR1A2 LTR MaLR 2 327 0 3 1806 383 360 119 35 chrX 160154208 160154426 -6495870 - L2 LINE L2 -519 2900 2655 3 1806 571 266 63 8 chrX 160154427 160154573 -6495723 + B3A SINE B2 5 156 -42 3 1806 315 0 0 0 chrX 160154573 160154608 -6495688 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 1806 374 275 88 77 chrX 160154608 160154642 -6495654 + B2_Mm2 SINE B2 151 187 -8 3 1806 212 265 0 0 chrX 160154642 160154691 -6495605 - L2 LINE L2 -770 2649 2601 3 1806 550 298 149 37 chrX 160154694 160155185 -6495111 + L1M5 LINE L1 3445 3990 -2156 3 1806 180 0 0 0 chrX 160155194 160155214 -6495082 + (TTC)n Simple_repeat Simple_repeat 2 21 0 3 1806 378 0 0 0 chrX 160155214 160155255 -6495041 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 3 1806 335 60 20 0 chrX 160155360 160155410 -6494886 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 3 1806 4691 108 38 12 chrX 160155410 160156143 -6494153 - Lx LINE L1 -36 6618 5867 3 1806 3662 134 2 0 chrX 160156153 160156733 -6493563 + Lx LINE L1 5301 5881 -2 3 1806 1167 225 111 54 chrX 160156832 160157165 -6493131 + ORR1E LTR MaLR 3 354 -5 3 1806 468 0 0 0 chrX 160157196 160157248 -6493048 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 1806 764 316 68 38 chrX 160157304 160157567 -6492729 - B4A SINE B4 -20 272 2 3 1806 362 295 143 17 chrX 160157589 160157926 -6492370 + L1M5 LINE L1 3982 4367 -1773 3 1806 448 312 41 89 chrX 160158119 160158294 -6492002 + L1M5 LINE L1 4457 4623 -1523 3 1806 526 288 98 0 chrX 160158294 160158426 -6491870 + B1F SINE Alu 3 147 -2 3 1806 448 312 41 89 chrX 160158426 160158834 -6491462 + L1M5 LINE L1 4624 5012 -1134 3 1806 435 19 0 0 chrX 160158886 160158938 -6491358 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 3 1806 467 250 107 57 chrX 160158941 160159081 -6491215 + B1F SINE Alu 1 147 -2 3 1806 383 260 69 37 chrX 160159120 160159308 -6490988 + L1M5 LINE L1 5329 5522 -640 3 1806 371 240 21 79 chrX 160159294 160159434 -6490862 + Lx9 LINE L1 7024 7155 -489 3 1806 226 241 0 0 chrX 160159431 160159485 -6490811 + L1M5 LINE L1 5732 5785 -659 3 1806 1005 279 98 14 chrX 160159511 160159951 -6490345 + Lx9 LINE L1 7149 7625 -19 3 1806 383 305 89 5 chrX 160160006 160160230 -6490066 + L1M5 LINE L1 5528 5770 -674 3 1806 309 273 0 0 chrX 160160270 160160347 -6489949 + Lx8 LINE L1 7129 7205 -268 4 1806 523 307 45 0 chrX 160160409 160160585 -6489711 + Lx8 LINE L1 7206 7389 -84 4 1806 638 296 7 7 chrX 160162332 160162485 -6487811 + B3A SINE B2 4 156 -42 4 1806 441 0 0 0 chrX 160162497 160162546 -6487750 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1806 403 278 0 11 chrX 160163280 160163371 -6486925 + ID_B1 SINE B4 84 173 -51 4 1806 337 307 104 9 chrX 160163371 160163394 -6486902 + PB1 SINE Alu 3 127 0 4 1806 483 202 0 0 chrX 160163527 160163631 -6486665 + GA-rich Low_complexity Low_complexity 1 104 0 4 1806 237 33 0 0 chrX 160164501 160164531 -6485765 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 4 1806 2907 62 0 28 chrX 160164533 160164929 -6485367 - L1Md_F2 LINE L1 -2 6580 6196 4 1806 239 133 22 0 chrX 160165282 160165327 -6484969 + (TTA)n Simple_repeat Simple_repeat 1 46 0 4 1806 295 242 50 114 chrX 160166055 160166195 -6484101 + YREP_Mm Unknown Unknown 171 301 -1511 4 1806 754 250 67 43 chrX 160166070 160166279 -6484017 - ID_B1 SINE B4 -2 222 9 4 1806 452 304 5 146 chrX 160166787 160166999 -6483297 + B3A SINE B2 1 182 -16 4 1806 180 0 0 0 chrX 160166991 160167011 -6483285 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1806 968 281 176 3 chrX 160167034 160167408 -6482888 + MLT1F LTR MaLR 110 548 0 4 1806 343 292 0 22 chrX 160167689 160167780 -6482516 + Lx8 LINE L1 7134 7222 -251 4 1806 6959 139 14 25 chrX 160167824 160169007 -6481289 - L1_Mur2 LINE L1 -422 5455 4286 4 1806 1930 182 43 6 chrX 160169006 160169672 -6480624 + Lx5 LINE L1 5646 5954 -1096 4 1807 440 62 0 15 chrX 160170013 160170078 -6480218 + (TA)n Simple_repeat Simple_repeat 1 64 0 4 1807 551 244 125 25 chrX 160170143 160170424 -6479872 + L1MC1 LINE L1 6002 6310 -23 4 1807 230 260 270 40 chrX 160170571 160170671 -6479625 - ID_B1 SINE B4 -16 208 86 4 1807 256 290 16 16 chrX 160171163 160171226 -6479070 - PB1D10 SINE Alu -42 75 13 4 1807 303 328 52 47 chrX 160171700 160171911 -6478385 + HAL1 LINE L1 2267 2478 -29 4 1807 394 287 40 0 chrX 160171979 160172080 -6478216 + RSINE1 SINE B4 56 160 -5 4 1807 1520 215 57 32 chrX 160172608 160172978 -6477318 - MTE2b LTR MaLR 0 379 1 4 1807 343 287 14 110 chrX 160173128 160173273 -6477023 + B1F1 SINE Alu 14 144 -5 4 1807 211 273 45 0 chrX 160173286 160173352 -6476944 + ID SINE ID 2 70 -154 4 1807 23 0 0 0 chrX 160173352 160173375 -6476921 + AT_rich Low_complexity Low_complexity 1 23 0 4 1807 324 0 0 0 chrX 160173375 160173411 -6476885 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 1807 801 320 10 10 chrX 160173477 160173767 -6476529 + B4A SINE B4 1 290 -2 4 1807 288 0 0 0 chrX 160173802 160173834 -6476462 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1807 451 274 58 15 chrX 160173841 160173978 -6476318 + ID_B1 SINE B4 82 224 0 4 1807 325 253 125 34 chrX 160173996 160174172 -6476124 - Charlie5 DNA MER1_type -70 2554 2363 4 1807 385 314 35 84 chrX 160174371 160174573 -6475723 - MER58B DNA MER1_type -1 340 149 4 1807 524 320 0 0 chrX 160174623 160174745 -6475551 + B3A SINE B2 1 122 -76 4 1807 721 252 28 134 chrX 160175302 160175623 -6474673 - B4A SINE B4 -4 288 2 4 1807 279 196 113 52 chrX 160175709 160175806 -6474490 + MER34A1 LTR ERV1 77 179 -408 4 1807 455 268 16 16 chrX 160175833 160175962 -6474334 + B3 SINE B2 1 129 -87 4 1807 528 16 0 0 chrX 160175962 160176023 -6474273 + (TC)n Simple_repeat Simple_repeat 2 62 0 4 1807 711 169 6 96 chrX 160176027 160176184 -6474112 - B1_Mur3 SINE Alu 0 149 7 4 1807 401 218 23 0 chrX 160176192 160176279 -6474017 + B3 SINE B2 127 215 -1 4 1807 361 386 65 4 chrX 160176286 160176515 -6473781 + MER34A1 LTR ERV1 181 423 -164 4 1807 404 295 16 16 chrX 160176684 160176808 -6473488 + ID_B1 SINE B4 94 217 -7 4 1807 529 259 14 34 chrX 160177663 160177795 -6472501 + B1F SINE Alu 5 135 -14 4 1807 1246 41 0 0 chrX 160177795 160177941 -6472355 + B1_Mus1 SINE Alu 2 147 -1 4 1807 529 259 14 34 chrX 160177941 160177956 -6472340 + B1F SINE Alu 136 149 0 4 1807 245 271 14 14 chrX 160177978 160178049 -6472247 + ID_B1 SINE B4 81 151 -73 4 1807 284 274 14 0 chrX 160178102 160178175 -6472121 + ID_B1 SINE B4 145 218 -6 4 1807 222 211 70 0 chrX 160178124 160178181 -6472115 + B1F SINE Alu 89 149 0 4 1807 189 338 39 0 chrX 160178759 160178836 -6471460 - MER5A DNA MER1_type -18 171 92 4 1807 483 33 0 0 chrX 160178919 160178980 -6471316 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1807 239 299 12 38 chrX 160179113 160179193 -6471103 + ID_B1 SINE B4 84 161 -63 4 1807 557 62 25 0 chrX 160179234 160179315 -6470981 + (CATA)n Simple_repeat Simple_repeat 2 84 0 4 1807 295 358 54 27 chrX 160179333 160179557 -6470739 + MIRb SINE MIR 22 251 -17 4 1807 362 348 0 0 chrX 160179585 160179700 -6470596 - Tigger5 DNA MER2_type -1 2405 2291 4 1807 780 45 27 0 chrX 160180296 160180408 -6469888 + L1Md_F3 LINE L1 6458 6572 -12 4 1807 432 264 85 0 chrX 160180761 160180867 -6469429 + PB1D9 SINE Alu 5 119 -1 4 1807 1179 231 87 36 chrX 160180974 160181365 -6468931 - RMER5 LTR ERV1 -10 524 114 4 1807 216 116 87 65 chrX 160181379 160181425 -6468871 + B4 SINE B4 27 73 -219 4 1807 417 129 0 0 chrX 160181497 160181567 -6468729 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 1807 1636 206 67 3 chrX 160181844 160182190 -6468106 - ORR1D2 LTR MaLR 0 370 3 4 1807 477 329 92 0 chrX 160182884 160183048 -6467248 + ID_B1 SINE B4 46 224 0 4 1807 234 316 116 0 chrX 160183051 160183146 -6467150 + B4A SINE B4 1 106 -186 4 1807 475 153 89 0 chrX 160183225 160183317 -6466979 + B1_Mur1 SINE Alu 40 142 -7 4 1807 321 305 7 157 chrX 160183249 160183389 -6466907 + B4 SINE B4 164 282 -10 4 1807 393 22 0 0 chrX 160183423 160183469 -6466827 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 1807 441 0 0 0 chrX 160183469 160183517 -6466779 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1807 392 247 184 7 chrX 160183698 160183845 -6466451 + ID_B1 SINE B4 52 224 0 4 1807 444 231 67 0 chrX 160184256 160184360 -6465936 - B1_Mur1 SINE Alu -36 113 3 4 1807 292 301 123 77 chrX 160184360 160184415 -6465881 - B4 SINE B4 -194 98 37 4 1807 1144 211 9 5 chrX 160185069 160185283 -6465013 - B3 SINE B2 0 216 2 4 1807 501 246 28 82 chrX 160185561 160185743 -6464553 - B3A SINE B2 0 198 27 4 1807 937 206 54 20 chrX 160185759 160185962 -6464334 - B3 SINE B2 -6 210 1 4 1807 387 315 0 9 chrX 160186891 160187003 -6463293 + B1F1 SINE Alu 6 116 -33 4 1807 561 228 87 0 chrX 160187016 160187143 -6463153 + B1F2 SINE Alu 2 139 -10 4 1807 555 200 9 18 chrX 160187669 160187781 -6462515 + B3A SINE B2 2 112 -86 4 1807 464 259 9 9 chrX 160187866 160187979 -6462317 - B1_Mur1 SINE Alu -15 134 22 4 1807 356 321 7 29 chrX 160188024 160188162 -6462134 + B1_Mur1 SINE Alu 12 146 -3 4 1807 186 43 0 0 chrX 160188893 160188916 -6461380 + (G)n Simple_repeat Simple_repeat 1 23 0 4 1807 458 319 41 18 chrX 160190413 160190582 -6459714 - RMER15 LTR ERVL 0 575 403 4 1807 433 392 36 5 chrX 160190686 160190909 -6459387 - Lx8 LINE L1 -249 7224 6995 4 1807 1049 307 8 28 chrX 160191067 160191459 -6458837 - RMER15-int LTR ERVL -3256 1743 1360 4 1807 1387 217 77 16 chrX 160191505 160191870 -6458426 + MTD LTR MaLR 18 404 -15 4 1807 3069 323 33 52 chrX 160191885 160193264 -6457032 - RMER15-int LTR ERVL -3643 1356 4 4 1807 504 210 117 37 chrX 160193265 160193428 -6456868 - RMER15 LTR ERVL 0 575 400 4 1807 271 307 60 52 chrX 160193428 160193562 -6456734 - Lx8 LINE L1 -211 7262 7128 4 1807 411 335 60 27 chrX 160193534 160193718 -6456578 - Lx8 LINE L1 -250 7223 7034 4 1807 207 167 0 0 chrX 160193738 160193774 -6456522 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 4 1807 183 205 0 0 chrX 160193880 160193919 -6456377 + GA-rich Low_complexity Low_complexity 2 40 0 4 1807 204 194 31 46 chrX 160193948 160194013 -6456283 + GA-rich Low_complexity Low_complexity 5 68 0 4 1807 218 32 0 31 chrX 160194017 160194049 -6456247 + (GGAAA)n Simple_repeat Simple_repeat 5 35 0 4 1807 469 0 0 32 chrX 160194598 160194661 -6455635 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 1807 242 221 92 105 chrX 160194664 160194740 -6455556 - ID4_ SINE ID -3 80 6 4 1807 384 152 0 0 chrX 160195296 160195362 -6454934 + (TTTA)n Simple_repeat Simple_repeat 3 68 0 4 1807 942 312 80 31 chrX 160195374 160195851 -6454445 + Lx8 LINE L1 6971 7470 -3 4 1807 908 67 228 51 chrX 160195886 160196044 -6454252 + B2_Mm2 SINE B2 2 187 -8 4 1807 557 307 48 0 chrX 160196059 160196225 -6454071 + ID_B1 SINE B4 3 176 -48 4 1807 411 315 5 43 chrX 160196646 160196883 -6453413 + C-rich Low_complexity Low_complexity 1 228 0 4 1807 487 311 7 20 chrX 160196909 160197375 -6452921 + CT-rich Low_complexity Low_complexity 1 459 0 4 1807 463 286 0 43 chrX 160197395 160197581 -6452715 + C-rich Low_complexity Low_complexity 1 178 0 4 1807 403 289 23 17 chrX 160197531 160197707 -6452589 + CT-rich Low_complexity Low_complexity 2 178 0 4 1807 268 147 85 85 chrX 160197734 160197746 -6452550 - RLTR25B LTR ERVK -507 521 510 4 1807 387 0 0 0 chrX 160197746 160197789 -6452507 + (TC)n Simple_repeat Simple_repeat 1 43 0 4 1807 268 147 85 85 chrX 160197789 160197858 -6452438 - RLTR25B LTR ERVK -519 509 440 4 1807 763 75 0 0 chrX 160197858 160197895 -6452401 - B1_Mm SINE Alu -40 107 2 4 1807 272 269 0 41 chrX 160197906 160198003 -6452293 + CT-rich Low_complexity Low_complexity 3 95 0 4 1807 416 231 0 19 chrX 160199423 160199529 -6450767 + PB1D10 SINE Alu 1 104 -13 4 1807 369 0 0 0 chrX 160201096 160201137 -6449159 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1807 272 289 20 49 chrX 160201189 160201291 -6449005 + ID_B1 SINE B4 78 176 -48 4 1807 359 197 0 62 chrX 160201211 160201292 -6449004 + PB1D10 SINE Alu 21 96 -21 4 1807 749 318 71 72 chrX 160201306 160201460 -6448836 + L1MC4 LINE L1 5320 5474 -2568 4 1807 612 229 122 0 chrX 160201460 160201648 -6448648 + B3 SINE B2 1 211 -5 4 1807 749 305 99 48 chrX 160201648 160202164 -6448132 + L1MC4 LINE L1 5475 6005 -174 4 1807 334 255 129 41 chrX 160202183 160202330 -6447966 + ID_B1 SINE B4 63 222 -2 4 1807 459 248 68 23 chrX 160202203 160202335 -6447961 + B1F SINE Alu 12 149 0 5 1807 357 259 63 146 chrX 160202552 160202710 -6447586 + ID_B1 SINE B4 2 146 -78 5 1807 242 337 0 34 chrX 160202711 160202800 -6447496 + GA-rich Low_complexity Low_complexity 2 87 0 5 1807 414 296 25 68 chrX 160203794 160203957 -6446339 + RSINE1 SINE B4 2 157 -8 5 1807 428 35 0 17 chrX 160204143 160204202 -6446094 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 1807 387 0 0 0 chrX 160204202 160204245 -6446051 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1807 342 147 0 0 chrX 160205294 160205362 -6444934 + (GA)n Simple_repeat Simple_repeat 1 68 0 5 1807 690 207 12 68 chrX 160205363 160205524 -6444772 - B3A SINE B2 -44 154 3 5 1807 833 159 7 14 chrX 160205979 160206119 -6444177 - B1_Mur1 SINE Alu -9 140 2 5 1807 427 268 0 0 chrX 160207168 160207265 -6443031 + RSINE1 SINE B4 4 100 -65 5 1807 447 19 0 0 chrX 160207284 160207336 -6442960 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1807 1139 78 0 0 chrX 160207353 160207494 -6442802 + B1_Mus1 SINE Alu 1 141 -7 5 1807 588 121 0 0 chrX 160207506 160207597 -6442699 + (GAAA)n Simple_repeat Simple_repeat 2 92 0 5 1807 670 329 42 36 chrX 160208210 160208519 -6441777 + MER58B DNA MER1_type 9 319 -22 5 1807 678 323 106 6 chrX 160208807 160209119 -6441177 + MER2 DNA MER2_type 1 343 -2 5 1807 332 245 20 0 chrX 160209146 160209257 -6441039 - ID4_ SINE ID -22 130 17 5 1807 413 303 0 27 chrX 160210122 160210234 -6440062 + PB1D10 SINE Alu 4 112 -5 5 1807 490 290 19 13 chrX 160210303 160210460 -6439836 + RSINE1 SINE B4 2 159 -6 5 1807 423 0 0 0 chrX 160210465 160210512 -6439784 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1807 636 257 7 19 chrX 160210545 160210700 -6439596 + RSINE1 SINE B4 9 161 -4 5 1807 230 279 44 0 chrX 160210812 160210880 -6439416 + PB1D10 SINE Alu 12 82 -35 5 1807 428 264 0 0 chrX 160210905 160210996 -6439300 + MTC LTR MaLR 20 110 -309 5 1807 463 0 0 0 chrX 160211003 160211058 -6439238 + B2_Mm1a SINE B2 106 160 -33 5 1807 402 79 0 0 chrX 160211058 160211121 -6439175 + (TAAA)n Simple_repeat Simple_repeat 3 65 0 5 1807 1477 162 73 41 chrX 160211125 160211440 -6438856 + MTC LTR MaLR 92 416 -5 5 1807 222 91 0 0 chrX 160211500 160211533 -6438763 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 5 1807 226 333 0 0 chrX 160211540 160211615 -6438681 + ID4_ SINE ID 8 82 -1 5 1807 407 202 137 11 chrX 160211800 160211895 -6438401 - PB1D7 SINE Alu -1 119 13 5 1807 242 229 16 16 chrX 160212199 160212261 -6438035 + MIR SINE MIR 26 87 -121 5 1807 569 323 31 20 chrX 160212388 160212584 -6437712 + Lx8 LINE L1 7032 7229 -244 5 1807 261 271 42 14 chrX 160212569 160212640 -6437656 + Lx8 LINE L1 7153 7225 -248 5 1807 238 305 0 0 chrX 160212752 160212811 -6437485 + Lx8 LINE L1 7155 7213 -260 5 1807 3182 36 8 8 chrX 160212813 160213201 -6437095 - RLTR10 LTR ERVK -2 388 1 5 1807 247 357 37 37 chrX 160213222 160213385 -6436911 + RMER15 LTR ERVL 371 533 -42 5 1807 713 333 61 37 chrX 160213425 160214137 -6436159 + RMER15-int LTR ERVL 18 762 -4237 5 1807 378 107 0 0 chrX 160214906 160214962 -6435334 + (TTCC)n Simple_repeat Simple_repeat 2 57 0 5 1807 191 143 83 0 chrX 160215013 160215097 -6435199 + (CAGA)n Simple_repeat Simple_repeat 2 92 0 5 1807 699 227 13 51 chrX 160215107 160215265 -6435031 - B3A SINE B2 -44 154 3 5 1807 256 347 17 8 chrX 160215267 160215386 -6434910 - PB1D7 SINE Alu 0 120 1 5 1807 607 262 0 7 chrX 160216000 160216142 -6434154 + ID_B1 SINE B4 84 224 0 5 1807 599 224 14 34 chrX 160216416 160216564 -6433732 - B1F SINE Alu 0 149 5 5 1807 616 299 0 18 chrX 160218125 160218292 -6432004 + RSINE1 SINE B4 2 165 0 5 1807 944 274 140 36 chrX 160218542 160218575 -6431721 + MTD LTR MaLR 18 45 -374 5 1807 1248 150 50 27 chrX 160218575 160218794 -6431502 - URR1B DNA MER1_type 0 225 2 5 1807 944 274 140 36 chrX 160218794 160219124 -6431172 + MTD LTR MaLR 46 419 0 5 1807 346 275 47 55 chrX 160219124 160219249 -6431047 + ID_B1 SINE B4 101 224 0 5 1807 953 278 0 0 chrX 160219255 160219478 -6430818 + ID_B1 SINE B4 2 224 0 5 1807 326 227 361 22 chrX 160219492 160219672 -6430624 + MLT1D LTR MaLR 263 503 -2 5 1807 366 241 52 35 chrX 160220387 160220503 -6429793 - B3A SINE B2 -72 126 9 5 1807 955 178 135 15 chrX 160220610 160220810 -6429486 - URR1A DNA MER1_type -2 224 1 5 1807 28 29 0 0 chrX 160221552 160221587 -6428709 + AT_rich Low_complexity Low_complexity 1 35 0 5 1807 267 337 60 18 chrX 160221807 160221973 -6428323 + MLT1C LTR MaLR 287 459 -8 5 1807 576 53 0 0 chrX 160222684 160222760 -6427536 + (GTTTG)n Simple_repeat Simple_repeat 2 77 0 5 1807 287 185 73 18 chrX 160222761 160222816 -6427480 - B1F SINE Alu -13 136 79 5 1807 204 125 0 0 chrX 160222839 160222871 -6427425 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1807 281 264 42 0 chrX 160222871 160222943 -6427353 - B1F SINE Alu -66 83 9 5 1807 1092 85 0 28 chrX 160222970 160223115 -6427181 - B1_Mus2 SINE Alu -2 145 5 5 1807 998 163 179 0 chrX 160223751 160223941 -6426355 - URR1B DNA MER1_type 0 225 2 5 1807 294 327 19 29 chrX 160223968 160224072 -6426224 + PB1D10 SINE Alu 1 103 -14 5 1807 598 271 29 125 chrX 160224299 160224539 -6425757 + B4A SINE B4 9 225 -67 5 1807 1894 234 52 23 chrX 160224539 160224981 -6425315 - Lx8 LINE L1 -334 7139 6685 5 1807 183 42 0 0 chrX 160226197 160226221 -6424075 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 5 1807 195 42 0 0 chrX 160226544 160226568 -6423728 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 5 1807 2113 29 8 8 chrX 160226572 160226813 -6423483 - L1Md_F3 LINE L1 -16 6568 6328 5 1807 453 367 53 25 chrX 160227182 160227540 -6422756 + MER52-int LTR ERV1 2433 2954 -4251 5 1807 453 319 43 18 chrX 160228474 160228637 -6421659 + MER52-int LTR ERV1 3753 3919 -3172 5 1807 523 294 29 6 chrX 160229616 160229787 -6420509 + MER52-int LTR ERV1 4967 5141 -1950 5 1807 732 380 67 0 chrX 160229801 160230220 -6420076 + Lx8 LINE L1 6735 7181 -292 5 1807 3265 179 7 2 chrX 160230522 160231081 -6419215 + RMER1B Other Other 1 880 -186 5 1807 192 40 0 0 chrX 160231948 160231973 -6418323 + (TAGGG)n Simple_repeat Simple_repeat 2 26 0 5 1807 216 0 0 0 chrX 160232068 160232092 -6418204 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1807 207 0 0 0 chrX 160232917 160232940 -6417356 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5 1807 697 229 14 7 chrX 160233161 160233302 -6416994 + B1_Mur1 SINE Alu 1 142 -7 5 1807 400 241 167 46 chrX 160233340 160233514 -6416782 + B3A SINE B2 1 195 0 5 1807 616 302 13 7 chrX 160233531 160233681 -6416615 + RSINE1 SINE B4 12 162 -3 5 1807 282 260 13 0 chrX 160234042 160234119 -6416177 + L1MA4 LINE L1 5855 5932 -368 5 1807 1088 200 4 0 chrX 160235227 160235457 -6414839 + Lx6 LINE L1 888 1118 -6610 5 1807 2871 54 0 8 chrX 160235455 160235811 -6414485 - L1_Mus1 LINE L1 -436 6131 5779 5 1807 4080 21 0 0 chrX 160235811 160236245 -6414051 + L1_Mus1 LINE L1 6132 6565 -2 5 1807 18810 168 48 124 chrX 160236269 160239253 -6411043 + Lx6 LINE L1 1037 3826 -2054 5 1807 1795 123 6 76 chrX 160239253 160239556 -6410740 + ORR1A4 LTR MaLR 1 281 -48 5 1807 943 131 19 29 chrX 160239556 160239728 -6410568 + B1_Mm SINE Alu 2 138 -9 5 1807 210 37 0 0 chrX 160239728 160239755 -6410541 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1807 462 36 0 0 chrX 160239755 160239810 -6410486 + ORR1A4 LTR MaLR 275 329 0 5 1807 18810 166 46 130 chrX 160239810 160241396 -6408900 + Lx6 LINE L1 4130 5752 -1708 5 1807 1570 68 5 16 chrX 160241396 160241590 -6408706 + B2_Mm1t SINE B2 2 193 0 5 1807 18810 202 130 50 chrX 160241590 160242045 -6408251 + Lx6 LINE L1 5750 6273 -1187 5 1807 1150 258 163 4 chrX 160241654 160242108 -6408188 + Lx4B LINE L1 5853 6581 -879 5 1807 1437 274 79 24 chrX 160242105 160242661 -6407635 + Lx6 LINE L1 6479 7460 0 5 1807 408 20 0 0 chrX 160243280 160243329 -6406967 + (GA)n Simple_repeat Simple_repeat 1 49 0 5 1807 357 306 102 0 chrX 160243462 160243560 -6406736 + PB1 SINE Alu 12 119 -8 5 1807 615 39 0 0 chrX 160243801 160243879 -6406417 + (TTTC)n Simple_repeat Simple_repeat 3 80 0 5 1807 678 117 10 0 chrX 160243882 160243985 -6406311 - B1_Mur4 SINE Alu -13 137 34 5 1807 328 271 23 12 chrX 160244027 160244113 -6406183 - PB1D10 SINE Alu -10 107 21 5 1807 23 0 0 0 chrX 160244229 160244252 -6406044 + AT_rich Low_complexity Low_complexity 1 23 0 5 1807 355 118 0 0 chrX 160244267 160244318 -6405978 + B1_Mus1 SINE Alu 6 56 -92 5 1807 607 183 34 17 chrX 160244818 160244935 -6405361 - PB1D9 SINE Alu -1 119 1 5 1807 360 310 33 41 chrX 160245024 160245145 -6405151 - B4A SINE B4 -171 121 2 5 1807 191 74 17 69 chrX 160245193 160245251 -6405045 + T-rich Low_complexity Low_complexity 4 58 0 5 1807 356 284 62 16 chrX 160245562 160245691 -6404605 - B1F SINE Alu -13 136 2 5 1807 513 293 7 22 chrX 160246033 160246169 -6404127 + ID_B1 SINE B4 87 220 -4 5 1807 1498 253 142 51 chrX 160246551 160247119 -6403177 + Lx8 LINE L1 6814 7439 -34 5 1807 1170 112 88 6 chrX 160247119 160247289 -6403007 + B2_Mm2 SINE B2 2 185 -10 5 1807 1498 253 142 51 chrX 160247289 160247325 -6402971 + Lx8 LINE L1 7440 7473 0 5 1807 519 45 0 0 chrX 160248162 160248228 -6402068 + (TGGA)n Simple_repeat Simple_repeat 4 69 0 5 1807 224 314 29 123 chrX 160248269 160248407 -6401889 + MIR3 SINE MIR 54 178 -30 5 1807 1254 187 10 0 chrX 160248475 160248673 -6401623 - B3 SINE B2 -15 201 2 5 1807 325 188 12 12 chrX 160248681 160248767 -6401529 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 5 1807 768 22 0 0 chrX 160248796 160248886 -6401410 + (TG)n Simple_repeat Simple_repeat 2 91 0 5 1807 282 304 37 37 chrX 160248898 160248980 -6401316 - RSINE1 SINE B4 -83 82 1 5 1807 476 288 321 0 chrX 160249401 160249591 -6400705 + B4A SINE B4 3 253 -39 5 1807 270 0 0 0 chrX 160249612 160249642 -6400654 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 1807 538 249 178 41 chrX 160250485 160250682 -6399614 - ID_B1 SINE B4 0 224 1 6 1807 1193 113 11 5 chrX 160250742 160250928 -6399368 - L1_Mus3 LINE L1 0 6638 6452 6 1807 823 218 0 7 chrX 160250929 160251072 -6399224 - B1_Mur1 SINE Alu -5 144 3 6 1807 362 311 206 13 chrX 160251276 160251656 -6398640 - LTR16B2 LTR ERVL 0 463 11 6 1807 509 236 0 3 chrX 160251714 160251822 -6398474 + PB1D7 SINE Alu 5 110 -10 6 1807 956 119 14 20 chrX 160252018 160252164 -6398132 + B1_Mur4 SINE Alu 6 150 0 6 1807 261 0 0 0 chrX 160253447 160253476 -6396820 + (TG)n Simple_repeat Simple_repeat 1 29 0 6 1807 405 0 0 0 chrX 160253476 160253520 -6396776 + (GA)n Simple_repeat Simple_repeat 1 45 0 6 1807 560 275 50 0 chrX 160253743 160253863 -6396433 + B1F SINE Alu 1 126 -23 6 1807 902 153 0 6 chrX 160253886 160254050 -6396246 + GA-rich Low_complexity Low_complexity 2 164 0 6 1807 477 0 0 0 chrX 160254809 160254862 -6395434 + (GA)n Simple_repeat Simple_repeat 1 53 0 6 1807 419 0 20 0 chrX 160255699 160255750 -6394546 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1807 541 266 9 0 chrX 160255750 160255863 -6394433 - RSINE1 SINE B4 -51 114 1 6 1807 189 0 0 0 chrX 160256026 160256047 -6394249 + (TCTG)n Simple_repeat Simple_repeat 4 24 0 6 1807 373 157 7 48 chrX 160256066 160256213 -6394083 + (TCTCTG)n Simple_repeat Simple_repeat 4 144 0 6 1807 331 261 10 52 chrX 160256243 160256340 -6393956 - PB1D9 SINE Alu -23 97 5 6 1807 303 93 0 0 chrX 160257975 160258018 -6392278 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 1807 346 268 25 67 chrX 160258045 160258165 -6392131 + PB1D7 SINE Alu 1 115 -5 6 1807 513 79 0 26 chrX 160258381 160258459 -6391837 + L1_Mus2 LINE L1 6490 6565 -1 6 1807 321 89 0 0 chrX 160258483 160258528 -6391768 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 1807 1029 132 0 0 chrX 160258528 160258695 -6391601 + (GGAA)n Simple_repeat Simple_repeat 2 168 0 6 1807 1135 49 0 0 chrX 160258702 160258845 -6391451 + B1_Mus1 SINE Alu 6 148 0 6 1807 510 228 79 85 chrX 160258709 160258886 -6391410 + B4A SINE B4 97 272 -20 6 1807 277 311 47 0 chrX 160259024 160259130 -6391166 - MIR SINE MIR -36 226 116 6 1807 975 136 162 59 chrX 160259359 160259563 -6390733 + URR1B DNA MER1_type 1 225 0 6 1807 230 136 23 0 chrX 160259776 160259820 -6390476 + C-rich Low_complexity Low_complexity 2 46 0 6 1807 248 435 8 24 chrX 160259915 160260042 -6390254 + LTR33 LTR ERVL 156 280 -235 6 1807 346 262 52 104 chrX 160260260 160260609 -6389687 - MTEa LTR MaLR -1 378 53 6 1807 197 361 108 0 chrX 160262225 160262355 -6387941 + MER5B DNA MER1_type 7 150 -28 6 1807 300 321 82 22 chrX 160262355 160262489 -6387807 - HAL1-3A_ME LINE L1 -421 2437 2296 6 1807 519 266 48 8 chrX 160262492 160262617 -6387679 - B1F1 SINE Alu -8 141 12 6 1807 295 280 130 0 chrX 160262643 160262791 -6387505 + MLT1G3 LTR MaLR 242 419 -160 6 1807 699 217 7 27 chrX 160263179 160263326 -6386970 - B1_Mur2 SINE Alu -1 148 5 6 1807 428 312 43 37 chrX 160263190 160263353 -6386943 - ID_B1 SINE B4 -8 216 53 6 1807 508 212 0 0 chrX 160263554 160263634 -6386662 + RSINE1 SINE B4 86 165 0 6 1807 21 36 0 0 chrX 160263785 160263813 -6386483 + AT_rich Low_complexity Low_complexity 1 28 0 6 1807 347 319 50 8 chrX 160263905 160264025 -6386271 - RSINE1 SINE B4 -38 127 3 6 1807 716 304 182 24 chrX 160264041 160264704 -6385592 + L2 LINE L2 2103 2870 -549 6 1807 195 42 0 0 chrX 160265058 160265082 -6385214 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1807 1610 219 48 32 chrX 160265431 160265624 -6384672 + MTE2a LTR MaLR 2 195 -184 6 1807 324 0 0 0 chrX 160265624 160265660 -6384636 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1807 1610 219 48 32 chrX 160265660 160265838 -6384458 + MTE2a LTR MaLR 196 379 0 6 1807 5384 68 7 14 chrX 160266039 160266844 -6383452 + L1Md_F2 LINE L1 5862 6582 0 6 1807 7531 68 32 1 chrX 160266844 160267971 -6382325 + L1_Mus1 LINE L1 5410 6567 0 6 1807 1260 148 113 0 chrX 160268051 160268254 -6382042 - URR1A DNA MER1_type 0 226 1 6 1807 492 273 7 14 chrX 160268334 160268479 -6381817 + L1M3 LINE L1 2538 2681 -3459 6 1807 844 271 47 8 chrX 160268481 160268738 -6381558 - Tigger5 DNA MER2_type -2 2404 2138 6 1807 629 328 50 77 chrX 160268821 160269072 -6381224 - B4A SINE B4 -2 290 37 6 1807 1604 199 125 9 chrX 160269072 160269407 -6380889 + ORR1D1 LTR MaLR 1 374 0 6 1807 629 328 50 77 chrX 160269407 160269452 -6380844 - B4A SINE B4 -256 36 2 6 1807 331 210 0 0 chrX 160269528 160269590 -6380706 + L1M3 LINE L1 2679 2740 -3400 6 1807 1146 251 110 33 chrX 160269595 160269932 -6380364 + ORR1D2 LTR MaLR 8 370 0 6 1807 1660 230 121 17 chrX 160269932 160270346 -6379950 + L1M3 LINE L1 2734 3204 -2936 6 1807 432 0 0 0 chrX 160270346 160270394 -6379902 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 1807 1660 230 121 17 chrX 160270394 160270673 -6379623 + L1M3 LINE L1 3205 3498 -2642 6 1807 588 263 14 62 chrX 160270701 160270847 -6379449 + ID_B1 SINE B4 85 223 -1 6 1807 673 215 194 5 chrX 160270847 160271053 -6379243 + Lx8 LINE L1 6985 7229 -244 6 1807 369 311 0 46 chrX 160271108 160271216 -6379080 + RMER15 LTR ERVL 364 466 -109 6 1807 1004 291 77 41 chrX 160271472 160271564 -6378732 + L1MA9 LINE L1 5697 5788 -524 6 1807 760 220 49 65 chrX 160271564 160271749 -6378547 + B3A SINE B2 2 183 -15 6 1807 1004 291 77 41 chrX 160271749 160272215 -6378081 + L1MA9 LINE L1 5789 6275 -37 6 1807 464 198 307 26 chrX 160272223 160272337 -6377959 + B1F1 SINE Alu 1 146 -3 6 1807 392 269 28 248 chrX 160272378 160272510 -6377786 + ID_B1 SINE B4 1 217 -4 6 1807 503 233 14 122 chrX 160272510 160272657 -6377639 + B1F SINE Alu 12 142 -7 6 1807 470 359 82 0 chrX 160272781 160272940 -6377356 + B4A SINE B4 4 175 -117 6 1807 199 288 68 0 chrX 160273115 160273174 -6377122 - L2b LINE L2 -1 3374 3312 6 1807 340 209 0 29 chrX 160273219 160273288 -6377008 + ID4 SINE ID 3 69 -14 6 1807 822 21 0 0 chrX 160273627 160273723 -6376573 + (TC)n Simple_repeat Simple_repeat 1 96 0 6 1807 315 0 0 0 chrX 160273723 160273757 -6376539 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 1807 229 388 52 17 chrX 160273868 160274041 -6376255 - MIRb SINE MIR -50 218 40 6 1807 679 249 116 17 chrX 160274340 160274512 -6375784 + B3 SINE B2 28 216 0 6 1807 502 261 23 8 chrX 160274625 160274756 -6375540 + ID_B1 SINE B4 91 223 -1 6 1807 294 29 0 0 chrX 160274877 160274912 -6375384 + (TC)n Simple_repeat Simple_repeat 2 36 0 6 1807 380 20 0 20 chrX 160274912 160274961 -6375335 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1807 256 164 0 127 chrX 160275704 160275735 -6374561 + PB1D9 SINE Alu 66 96 -24 6 1807 2283 174 40 20 chrX 160275735 160276134 -6374162 + MTB_Mm LTR MaLR 1 407 0 6 1807 256 164 0 127 chrX 160276134 160276165 -6374131 + PB1D9 SINE Alu 97 120 0 6 1807 229 84 278 14 chrX 160276210 160276282 -6374014 + L1ME3B LINE L1 5897 5987 -253 6 1807 28162 138 12 16 chrX 160276280 160278290 -6372006 + L1_Mus4 LINE L1 701 2709 -3174 6 1807 180 0 0 0 chrX 160278290 160278310 -6371986 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 6 1807 28162 128 9 8 chrX 160278310 160281654 -6368642 + L1_Mus4 LINE L1 2710 6057 -579 6 1807 990 60 0 8 chrX 160281649 160281783 -6368513 + L1Md_F3 LINE L1 6432 6564 -20 6 1807 186 43 0 0 chrX 160281786 160281809 -6368487 + (GAAAA)n Simple_repeat Simple_repeat 4 26 0 6 1807 4168 102 18 9 chrX 160281809 160282374 -6367922 + L1_Mus4 LINE L1 6067 6636 0 6 1807 490 306 28 23 chrX 160282486 160282663 -6367633 + B3 SINE B2 39 216 0 6 1807 432 256 35 0 chrX 160282690 160282776 -6367520 + PB1D10 SINE Alu 3 91 -26 6 1807 572 0 15 0 chrX 160282777 160282845 -6367451 + (TC)n Simple_repeat Simple_repeat 1 69 0 6 1807 297 0 0 0 chrX 160282845 160282877 -6367419 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1807 250 295 34 43 chrX 160283418 160283535 -6366761 + GA-rich Low_complexity Low_complexity 2 117 0 6 1807 641 250 49 0 chrX 160283801 160283945 -6366351 - MTD LTR MaLR -8 411 261 6 1807 699 280 10 36 chrX 160283934 160284130 -6366166 + B3 SINE B2 26 216 0 6 1807 459 294 0 0 chrX 160284262 160284371 -6365925 - B1F SINE Alu -40 109 1 6 1807 287 322 129 9 chrX 160284397 160284431 -6365865 + ID_B1 SINE B4 93 219 -2 6 1807 398 228 25 0 chrX 160284431 160284510 -6365786 + B1F1 SINE Alu 64 144 -5 6 1807 360 309 36 7 chrX 160285027 160285167 -6365129 - LTR33 LTR ERVL -3 512 369 6 1807 601 179 0 35 chrX 160285254 160285370 -6364926 - PB1D9 SINE Alu -8 112 1 6 1807 1306 242 83 34 chrX 160285371 160285722 -6364574 + MTEa LTR MaLR 3 370 -9 6 1807 268 308 0 0 chrX 160285932 160286010 -6364286 + L1M5 LINE L1 5673 5750 -374 6 1807 441 0 0 0 chrX 160286369 160286418 -6363878 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1807 759 273 49 73 chrX 160286826 160287114 -6363182 - Lx8 LINE L1 -9 7464 7184 6 1807 588 292 106 31 chrX 160288453 160288971 -6361325 + LTR48 LTR ERV1 2 787 0 6 1807 2064 246 36 33 chrX 160289102 160289713 -6360583 + RCHARR1 DNA MER1_type 3 656 -318 6 1807 207 0 0 0 chrX 160289713 160289736 -6360560 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 6 1807 233 337 0 0 chrX 160289975 160290058 -6360238 - MurSatRep1 Unknown Unknown -1424 713 631 6 1807 1289 294 154 30 chrX 160290137 160290762 -6359534 + Lx8 LINE L1 6742 7443 -30 6 1807 1189 190 64 111 chrX 160290762 160291123 -6359173 + RCHARR1 DNA MER1_type 630 973 -1 6 1807 222 179 0 0 chrX 160291251 160291290 -6359006 + B3A SINE B2 1 39 -159 6 1807 675 286 58 26 chrX 160291479 160291694 -6358602 + Lx8 LINE L1 6926 7196 -448 6 1807 191 32 65 0 chrX 160291768 160291799 -6358497 + (TTTTG)n Simple_repeat Simple_repeat 1 33 0 6 1807 225 65 0 0 chrX 160293022 160293053 -6357243 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 6 1807 351 0 0 0 chrX 160293276 160293315 -6356981 + (GA)n Simple_repeat Simple_repeat 2 40 0 7 1807 504 0 0 0 chrX 160293345 160293401 -6356895 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 7 1807 311 330 10 0 chrX 160293404 160293501 -6356795 + Lx8 LINE L1 7128 7225 -248 6 1807 412 280 68 96 chrX 160293632 160293778 -6356518 + B4A SINE B4 1 142 -150 7 1807 360 0 0 0 chrX 160293966 160294006 -6356290 + (TC)n Simple_repeat Simple_repeat 1 40 0 7 1807 249 33 0 0 chrX 160294006 160294035 -6356261 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 1807 189 74 0 0 chrX 160294035 160294062 -6356234 + (TA)n Simple_repeat Simple_repeat 2 28 0 7 1807 390 262 61 45 chrX 160294183 160294315 -6355981 - B1F SINE Alu 0 149 16 7 1807 591 292 96 60 chrX 160294418 160294750 -6355546 + MER2 DNA MER2_type 1 344 -1 7 1807 732 277 48 6 chrX 160294852 160295019 -6355277 - B3A SINE B2 -16 182 9 7 1807 875 180 62 23 chrX 160295281 160295457 -6354839 - RLTR41 LTR ERV1 -186 260 78 7 1807 893 139 62 57 chrX 160295428 160295604 -6354692 - RLTR41 LTR ERV1 -269 177 1 7 1807 266 226 0 87 chrX 160295604 160295689 -6354607 - B4A SINE B4 -78 146 80 7 1807 603 40 0 0 chrX 160296803 160296877 -6353419 + (TTTC)n Simple_repeat Simple_repeat 3 76 0 7 1807 412 253 176 53 chrX 160296902 160297090 -6353206 - ID_B1 SINE B4 -12 212 2 7 1807 303 337 77 31 chrX 160297110 160297306 -6352990 - L1ME3A LINE L1 -10 6163 5959 7 225 27604 3 1 0 chrX 160297325 160301069 -6349227 - L1Md_A LINE L1 0 6582 2833 7 1808 441 0 0 0 chrX 160301177 160301226 -6349070 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1808 525 302 54 24 chrX 160301381 160301582 -6348714 + MLT1A LTR MaLR 178 374 -16 7 1808 362 241 4 38 chrX 160301591 160301712 -6348584 - ID4 SINE ID -28 124 13 7 1808 252 304 0 0 chrX 160302085 160302154 -6348142 - ID4_ SINE ID -13 70 2 7 1808 1076 249 9 5 chrX 160302310 160302532 -6347764 + ID_B1 SINE B4 1 223 -1 7 1808 503 216 0 0 chrX 160302611 160302699 -6347597 + ID_B1 SINE B4 122 209 -15 7 1808 332 273 91 0 chrX 160302699 160302710 -6347586 + B1F SINE Alu 41 148 -1 7 1808 450 0 0 0 chrX 160304539 160304589 -6345707 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 1808 428 232 0 50 chrX 160304602 160304702 -6345594 + PB1D10 SINE Alu 21 115 -2 7 1808 341 198 0 113 chrX 160304693 160304790 -6345506 + MER53 DNA hAT 20 105 -88 7 1808 792 0 0 0 chrX 160305032 160305120 -6345176 + (GAAA)n Simple_repeat Simple_repeat 3 90 0 7 1808 282 240 500 35 chrX 160305222 160305372 -6344924 + ID_B1 SINE B4 3 222 -2 7 1808 270 0 0 0 chrX 160305948 160305978 -6344318 + (A)n Simple_repeat Simple_repeat 1 30 0 7 1808 459 305 109 0 chrX 160306118 160306246 -6344050 + RSINE1 SINE B4 7 148 -17 7 1808 438 65 0 0 chrX 160306250 160306312 -6343984 + (CA)n Simple_repeat Simple_repeat 2 63 0 7 1808 571 248 19 0 chrX 160306351 160306456 -6343840 + B1_Mur2 SINE Alu 4 110 -39 7 1808 712 272 149 0 chrX 160307155 160307350 -6342946 - ID_B1 SINE B4 0 224 1 7 1808 938 254 14 40 chrX 160307389 160307611 -6342685 + B3 SINE B2 1 216 0 7 1808 1046 95 0 81 chrX 160307819 160307979 -6342317 + B1_Mus2 SINE Alu 1 147 0 7 1808 447 19 0 0 chrX 160308206 160308258 -6342038 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 1808 239 283 0 0 chrX 160308259 160308312 -6341984 - RSINE1 SINE B4 -18 147 95 7 1808 292 330 0 32 chrX 160308831 160308925 -6341371 - RSINE1 SINE B4 -67 98 8 7 1808 326 216 54 0 chrX 160309085 160309159 -6341137 + MLT1A0 LTR MaLR 3 80 -328 7 1808 388 295 0 11 chrX 160309156 160309245 -6341051 + 5S rRNA rRNA 1 88 -33 7 1808 594 287 0 22 chrX 160309278 160309417 -6340879 + RSINE1 SINE B4 2 137 -28 7 1808 285 98 0 0 chrX 160309422 160309463 -6340833 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1808 551 15 15 0 chrX 160309463 160309530 -6340766 + (GA)n Simple_repeat Simple_repeat 2 70 0 7 1808 569 272 57 97 chrX 160309534 160309782 -6340514 + MLT1A0 LTR MaLR 106 342 -23 7 1808 2205 126 30 8 chrX 160309788 160310149 -6340147 - ORR1D1 LTR MaLR 0 374 6 7 1808 499 199 32 128 chrX 160310337 160310493 -6339803 + B3A SINE B2 51 191 -7 7 1808 319 217 0 126 chrX 160310765 160310860 -6339436 - L1MB7 LINE L1 -190 5994 5912 7 1808 984 150 0 7 chrX 160310861 160311009 -6339287 + B1_Mus2 SINE Alu 1 147 0 7 1808 350 327 9 9 chrX 160311045 160311153 -6339143 + Lx8 LINE L1 7159 7266 -207 7 1808 237 241 52 0 chrX 160311154 160311212 -6339084 + RMER15 LTR ERVL 404 464 -111 7 1808 243 313 52 0 chrX 160311227 160311342 -6338954 + Lx8 LINE L1 7346 7466 -7 7 1808 1420 190 11 15 chrX 160311398 160311671 -6338625 + ORR1D1 LTR MaLR 1 272 -102 7 1808 382 336 16 8 chrX 160311706 160311835 -6338461 + B4A SINE B4 163 292 0 7 1808 216 0 0 0 chrX 160311938 160311962 -6338334 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1808 653 352 129 21 chrX 160312088 160312515 -6337781 + LTR86B2 LTR ERVL 5 477 -10 7 1808 551 259 30 133 chrX 160312858 160313217 -6337079 - L1MA9 LINE L1 -36 6276 5935 7 1808 897 197 146 21 chrX 160313301 160313493 -6336803 - B3 SINE B2 0 216 1 7 1808 1091 251 71 18 chrX 160313493 160313767 -6336529 + Lx8 LINE L1 7039 7328 -145 7 1808 594 160 10 0 chrX 160313767 160313867 -6336429 + MT2A LTR ERVL 6 106 -427 7 1808 1175 239 40 7 chrX 160313887 160314190 -6336106 - L1MA9 LINE L1 -524 5788 5476 7 1808 1406 102 27 0 chrX 160314278 160314465 -6335831 - B2_Mm1t SINE B2 0 193 2 7 1808 1838 162 122 30 chrX 160314530 160314866 -6335430 - ORR1B2 LTR MaLR 0 367 1 7 1808 611 268 65 30 chrX 160314964 160315164 -6335132 - ID_B1 SINE B4 -16 208 2 7 1808 753 241 151 26 chrX 160315602 160315794 -6334502 + B4 SINE B4 8 223 -69 7 1808 948 73 0 49 chrX 160315821 160315965 -6334331 + B1_Mus1 SINE Alu 6 142 -6 7 1808 581 0 14 0 chrX 160315977 160316046 -6334250 + (TC)n Simple_repeat Simple_repeat 1 70 0 7 1808 215 216 0 0 chrX 160316623 160316660 -6333636 + MER5B DNA MER1_type 10 46 -132 7 1808 503 171 38 23 chrX 160316752 160316857 -6333439 + B1_Mur1 SINE Alu 40 139 -10 7 1808 306 0 0 0 chrX 160316857 160316891 -6333405 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 7 1808 564 257 97 50 chrX 160317070 160317328 -6332968 - L1MA4 LINE L1 -281 6019 5750 7 1808 186 250 41 68 chrX 160317351 160317424 -6332872 + MER5A DNA MER1_type 114 184 -5 7 1808 301 360 100 60 chrX 160317744 160318163 -6332133 + LTR16E1 LTR ERVL 103 538 0 7 1808 198 91 0 0 chrX 160319171 160319204 -6331092 + (T)n Simple_repeat Simple_repeat 1 33 0 7 1808 457 304 46 20 chrX 160319996 160320147 -6330149 + RSINE1 SINE B4 4 158 -7 7 1808 251 302 0 0 chrX 160320268 160320321 -6329975 - ID2 SINE ID -29 54 2 7 1808 718 278 20 30 chrX 160320700 160320916 -6329380 - B3A SINE B2 -8 208 2 7 1808 412 245 282 0 chrX 160320960 160321123 -6329173 - ID_B1 SINE B4 -15 209 1 7 1808 969 262 5 9 chrX 160321541 160321757 -6328539 + ID_B1 SINE B4 3 217 -7 7 1808 335 253 0 46 chrX 160321802 160321889 -6328407 + ID_B1 SINE B4 123 205 -19 7 1808 265 244 23 58 chrX 160321910 160321997 -6328299 + PB1D10 SINE Alu 33 116 -1 7 1808 212 250 37 103 chrX 160322413 160322520 -6327776 - ID_B1 SINE B4 -124 100 1 7 1808 265 293 0 24 chrX 160322637 160322721 -6327575 - ID4_ SINE ID -1 82 1 7 1808 270 253 37 37 chrX 160322729 160322811 -6327485 - 4.5SRNA scRNA scRNA -11 83 2 7 1808 1138 75 0 0 chrX 160324065 160324199 -6326097 - B1_Mus2 SINE Alu -12 135 2 7 1808 349 368 59 45 chrX 160324468 160324690 -6325606 - MIRb SINE MIR -1 267 43 7 1808 343 283 39 62 chrX 160324874 160325002 -6325294 + RSINE1 SINE B4 41 165 0 7 1808 415 252 32 32 chrX 160325160 160325283 -6325013 + Lx8 LINE L1 6973 7095 -378 7 1808 645 258 30 50 chrX 160325322 160325522 -6324774 + Lx8 LINE L1 7186 7381 -92 7 1808 7090 51 3 0 chrX 160325513 160326501 -6323795 - L1Md_F2 LINE L1 -584 5998 5009 7 1808 4790 55 5 0 chrX 160326501 160327062 -6323234 + L1Md_F2 LINE L1 6019 6582 0 7 1808 292 347 126 67 chrX 160327570 160328150 -6322146 - L3 LINE CR1 -100 4389 3776 7 1808 349 239 15 0 chrX 160328210 160328277 -6322019 + tRNA-Ala-GCY_ tRNA tRNA 1 68 -7 7 1808 323 242 0 0 chrX 160328808 160328870 -6321426 - ID4_ SINE ID -20 63 2 7 1808 371 273 0 0 chrX 160329147 160329224 -6321072 - ID4 SINE ID -5 78 2 7 1808 2738 143 12 112 chrX 160329314 160329681 -6320615 + RMER4A LTR ERVK 1 346 -120 7 1808 713 43 11 0 chrX 160329681 160329774 -6320522 + (TTC)n Simple_repeat Simple_repeat 3 96 0 7 1808 2738 143 12 112 chrX 160329774 160329924 -6320372 + RMER4A LTR ERVK 347 466 0 7 1808 460 336 24 38 chrX 160330185 160330556 -6319740 + MLT1A LTR MaLR 1 353 -55 7 1808 269 289 13 26 chrX 160330581 160330659 -6319637 - ID4_ SINE ID -4 79 3 7 1808 230 234 0 0 chrX 160330662 160330709 -6319587 + MLT1A LTR MaLR 315 361 -13 7 1808 943 244 19 34 chrX 160331473 160331681 -6318615 + B3 SINE B2 2 206 -10 7 1808 336 270 100 11 chrX 160331688 160331868 -6318428 + L1MB5 LINE L1 5788 5983 -191 7 1808 3901 32 10 96 chrX 160331909 160332429 -6317867 + IAPLTR2_Mm LTR ERVK 1 475 0 7 1808 1000 248 17 22 chrX 160334552 160334783 -6315513 + B4A SINE B4 24 253 -39 7 1808 324 0 0 0 chrX 160334790 160334826 -6315470 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 1808 250 188 48 38 chrX 160334922 160335027 -6315269 + (TATAA)n Simple_repeat Simple_repeat 5 110 0 7 1808 249 268 56 14 chrX 160335768 160335840 -6314456 - MLT1E3 LTR MaLR -265 415 341 7 1808 180 0 0 0 chrX 160335852 160335872 -6314424 + (CAA)n Simple_repeat Simple_repeat 2 21 0 7 1808 1007 210 15 24 chrX 160335888 160336093 -6314203 + B3 SINE B2 9 211 -5 7 1808 324 0 0 0 chrX 160336185 160336221 -6314075 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 1808 401 279 0 0 chrX 160336274 160336353 -6313943 - RSINE1 SINE B4 -85 80 2 8 1808 314 258 20 49 chrX 160336399 160336501 -6313795 - MLT1E3 LTR MaLR -421 203 105 7 1808 331 311 76 97 chrX 160336878 160337063 -6313233 - MTEa LTR MaLR -47 332 152 8 1808 212 79 53 0 chrX 160337137 160337175 -6313121 + (TCTTG)n Simple_repeat Simple_repeat 2 41 0 8 1808 496 164 18 0 chrX 160337171 160337281 -6313015 + CT-rich Low_complexity Low_complexity 1 112 0 8 1808 594 60 0 0 chrX 160337281 160337364 -6312932 + (TG)n Simple_repeat Simple_repeat 2 84 0 8 1808 716 200 15 0 chrX 160337364 160337499 -6312797 - B1_Mus2 SINE Alu -9 138 2 8 1808 427 265 100 20 chrX 160338357 160338371 -6311925 - B3A SINE B2 -2 196 182 8 1808 428 77 15 0 chrX 160338371 160338436 -6311860 + (TG)n Simple_repeat Simple_repeat 1 66 0 8 1808 427 265 100 20 chrX 160338436 160338571 -6311725 - B3A SINE B2 -17 181 35 8 1808 25 31 0 0 chrX 160338575 160338607 -6311689 + AT_rich Low_complexity Low_complexity 1 32 0 8 1808 584 220 75 34 chrX 160338630 160338776 -6311520 - B3A SINE B2 -42 156 5 8 1808 217 352 119 104 chrX 160338847 160339250 -6311046 + L2b LINE L2 2967 3375 0 8 1808 23 0 0 0 chrX 160339263 160339286 -6311010 + AT_rich Low_complexity Low_complexity 1 23 0 8 1808 274 288 0 59 chrX 160339286 160339371 -6310925 - ID4 SINE ID -3 80 1 8 1808 280 185 0 214 chrX 160339603 160339706 -6310590 + RSINE1 SINE B4 85 165 0 8 1808 231 222 0 73 chrX 160339661 160339729 -6310567 + B3A SINE B2 136 198 0 8 1808 274 312 143 22 chrX 160340029 160340184 -6310112 + MIRc SINE MIR 6 174 -34 8 1808 414 318 67 62 chrX 160340760 160340968 -6309328 - MLT1J1 LTR MaLR -15 429 221 8 1808 679 213 14 14 chrX 160341057 160341200 -6309096 - B1_Mur1 SINE Alu -2 147 5 8 1808 280 308 107 113 chrX 160341835 160341985 -6308311 + MER5A DNA MER1_type 1 149 -40 8 1808 218 208 0 0 chrX 160342109 160342157 -6308139 + CT-rich Low_complexity Low_complexity 1 48 0 8 1808 216 97 0 0 chrX 160342162 160342193 -6308103 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 1808 639 260 73 70 chrX 160342204 160342477 -6307819 - B4 SINE B4 -14 278 5 8 1808 316 261 114 26 chrX 160342717 160342831 -6307465 + B1F SINE Alu 5 128 -21 8 1808 197 231 57 71 chrX 160342919 160342989 -6307307 + L2c LINE L2 3319 3387 0 8 1808 431 300 86 29 chrX 160343282 160343457 -6306839 - MER20 DNA MER1_type 0 219 35 8 1808 368 279 0 6 chrX 160344157 160344300 -6305996 - B3 SINE B2 -9 207 1 8 1808 342 0 0 0 chrX 160344692 160344730 -6305566 + (TA)n Simple_repeat Simple_repeat 1 38 0 8 1808 218 234 101 25 chrX 160345892 160345971 -6304325 + MIR3 SINE MIR 96 180 -28 8 1808 333 0 0 0 chrX 160346340 160346377 -6303919 + (T)n Simple_repeat Simple_repeat 1 37 0 8 1808 21 36 0 0 chrX 160347178 160347206 -6303090 + GC_rich Low_complexity Low_complexity 1 28 0 8 1808 221 0 0 33 chrX 160347684 160347714 -6302582 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 8 1808 218 197 113 16 chrX 160349278 160349340 -6300956 + L4 LINE RTE 1700 1767 -262 8 1808 24 32 0 0 chrX 160349536 160349567 -6300729 + AT_rich Low_complexity Low_complexity 1 31 0 8 1808 25 0 0 0 chrX 160349645 160349670 -6300626 + AT_rich Low_complexity Low_complexity 1 25 0 8 1808 201 273 89 18 chrX 160350749 160350805 -6299491 - MIR SINE MIR -104 104 45 8 1808 240 211 187 50 chrX 160352832 160352968 -6297328 + MIRb SINE MIR 92 246 -22 8 1808 811 169 174 5 chrX 160353525 160353715 -6296581 + URR1B DNA MER1_type 1 222 -3 8 1808 235 173 66 13 chrX 160354201 160354277 -6296019 + L1ME4a LINE L1 6044 6123 -1 8 1808 852 276 34 51 chrX 160354715 160354807 -6295489 + B4 SINE B4 4 97 -195 8 1808 189 0 0 0 chrX 160354807 160354828 -6295468 + (CTG)n Simple_repeat Simple_repeat 2 22 0 8 1808 822 274 15 10 chrX 160354837 160355040 -6295256 - B3 SINE B2 -12 204 1 8 1808 852 276 34 51 chrX 160355040 160355231 -6295065 + B4 SINE B4 98 292 0 8 1808 180 125 0 0 chrX 160355989 160356021 -6294275 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 8 1808 357 24 0 0 chrX 160356554 160356596 -6293700 + (TA)n Simple_repeat Simple_repeat 2 43 0 8 1808 780 252 33 37 chrX 160357232 160357446 -6292850 + ID_B1 SINE B4 10 222 -2 8 1808 33 80 0 0 chrX 160358218 160358293 -6292003 + AT_rich Low_complexity Low_complexity 1 75 0 8 1808 230 312 35 35 chrX 160360170 160360215 -6290081 - BC1_Mm scRNA scRNA -9 143 97 8 1808 1817 47 4 29 chrX 160360215 160360457 -6289839 - L1_Mus1 LINE L1 -4 6563 6328 8 1808 230 312 35 35 chrX 160360457 160360554 -6289742 - BC1_Mm scRNA scRNA -56 96 1 8 1808 235 295 128 5 chrX 160360616 160360827 -6289469 - MER112 DNA MER1_type -8 253 17 8 1808 528 231 34 0 chrX 160361041 160361158 -6289138 + MER20 DNA MER1_type 99 219 0 8 1808 23 33 0 0 chrX 160361845 160361875 -6288421 + AT_rich Low_complexity Low_complexity 1 30 0 8 1808 237 211 0 0 chrX 160362266 160362318 -6287978 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 1808 235 280 58 47 chrX 160362371 160362543 -6287753 + L1MC LINE L1 5727 5900 -1982 8 1808 184 222 133 0 chrX 160362544 160362589 -6287707 - MIR SINE MIR -93 169 119 8 1808 34 0 0 0 chrX 160362593 160362627 -6287669 + AT_rich Low_complexity Low_complexity 1 34 0 8 1808 216 0 0 0 chrX 160362723 160362747 -6287549 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 1808 1205 41 7 0 chrX 160362756 160362902 -6287394 - B1_Mm SINE Alu 0 147 1 8 1808 194 0 39 0 chrX 160363121 160363147 -6287149 + (TA)n Simple_repeat Simple_repeat 2 28 0 8 1808 28 0 0 0 chrX 160363153 160363181 -6287115 + AT_rich Low_complexity Low_complexity 1 28 0 8 1808 207 0 0 0 chrX 160364488 160364511 -6285785 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 8 1808 31 44 0 0 chrX 160366855 160366900 -6283396 + AT_rich Low_complexity Low_complexity 1 45 0 8 1808 386 235 98 0 chrX 160366990 160367092 -6283204 + PB1D10 SINE Alu 6 117 0 8 1808 652 218 28 39 chrX 160367585 160367766 -6282530 - L1MB2 LINE L1 -46 6125 5947 8 1808 303 28 0 0 chrX 160371437 160371473 -6278823 + (CACG)n Simple_repeat Simple_repeat 4 39 0 8 1808 1130 80 0 17 chrX 160371916 160372094 -6278202 - L1Md_F3 LINE L1 0 6584 6410 8 1808 243 183 58 19 chrX 160372387 160372450 -6277846 + ID4 SINE ID 2 77 -6 8 1808 1006 206 54 5 chrX 160373546 160373751 -6276545 + B3 SINE B2 2 216 0 8 1808 341 265 220 0 chrX 160373780 160373912 -6276384 + RSINE1 SINE B4 3 163 -2 8 1808 251 225 14 0 chrX 160373920 160373991 -6276305 + GA-rich Low_complexity Low_complexity 3 74 0 8 1808 315 0 0 0 chrX 160374077 160374112 -6276184 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 1808 406 302 0 0 chrX 160374302 160374526 -6275770 + (CTG)n Simple_repeat Simple_repeat 1 224 0 8 1808 304 220 41 71 chrX 160375062 160375085 -6275211 + ID_B1 SINE B4 130 212 -12 8 1808 339 157 27 67 chrX 160375085 160375147 -6275149 + B1F SINE Alu 78 137 -12 8 1808 261 0 0 0 chrX 160375147 160375176 -6275120 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 1808 304 220 41 71 chrX 160375176 160375188 -6275108 + ID_B1 SINE B4 213 224 0 8 1808 261 248 71 0 chrX 160375232 160375345 -6274951 + L1M4 LINE L1 5245 5365 -781 8 1808 189 74 0 0 chrX 160375574 160375601 -6274695 + (T)n Simple_repeat Simple_repeat 1 27 0 8 1808 1199 68 0 0 chrX 160375601 160375749 -6274547 - B1_Mus1 SINE Alu 0 148 1 8 1808 588 232 0 0 chrX 160375814 160375965 -6274331 + (TA)n Simple_repeat Simple_repeat 1 151 0 8 1808 822 171 0 14 chrX 160375980 160376128 -6274168 - B1_Mur4 SINE Alu -2 148 3 8 1808 553 247 0 0 chrX 160376159 160376256 -6274040 - B3 SINE B2 -6 210 114 8 1808 369 224 43 70 chrX 160376298 160376413 -6273883 - PB1D10 SINE Alu -1 116 5 8 1808 205 378 33 11 chrX 160376952 160377043 -6273253 + MIR SINE MIR 18 110 -98 8 1808 357 24 0 0 chrX 160378130 160378172 -6272124 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 1808 267 128 0 0 chrX 160378403 160378442 -6271854 + B3A SINE B2 1 39 -159 8 1808 247 286 0 12 chrX 160378442 160378568 -6271728 + (TA)n Simple_repeat Simple_repeat 1 124 0 8 1808 324 64 0 0 chrX 160378602 160378649 -6271647 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1808 667 187 27 108 chrX 160378680 160378866 -6271430 - RMER30 DNA MER1_type -30 172 2 8 1808 180 0 0 0 chrX 160378991 160379011 -6271285 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 1808 510 175 155 0 chrX 160379051 160379148 -6271148 - B1_Mur2 SINE Alu -37 112 1 8 1808 308 296 92 46 chrX 160379148 160379190 -6271106 - MT2B LTR ERVL -433 168 121 8 1808 513 241 17 0 chrX 160379725 160379841 -6270455 + PB1D7 SINE Alu 1 118 -2 8 1808 488 214 0 53 chrX 160379886 160379980 -6270316 - RSINE1 SINE B4 -74 91 3 8 1808 679 177 53 8 chrX 160380056 160380187 -6270109 - B1_Mus1 SINE Alu -6 142 6 8 1808 369 291 0 25 chrX 160381646 160381727 -6268569 + RSINE1 SINE B4 3 81 -84 8 1808 396 125 0 0 chrX 160381737 160381801 -6268495 + (CA)n Simple_repeat Simple_repeat 2 65 0 8 1808 313 267 119 0 chrX 160381844 160381945 -6268351 + PB1D9 SINE Alu 1 113 -7 8 1808 603 62 20 10 chrX 160381946 160382044 -6268252 + (TAGA)n Simple_repeat Simple_repeat 2 100 0 8 1808 1061 226 114 111 chrX 160382227 160382596 -6267700 + MTE2a LTR MaLR 1 370 -9 8 1808 235 238 0 0 chrX 160383030 160383072 -6267224 + B1_Mur1 SINE Alu 75 116 -33 8 1808 1831 251 143 21 chrX 160383123 160383379 -6266917 + Lx8 LINE L1 6819 7113 -360 8 1808 1387 161 167 18 chrX 160383379 160383708 -6266588 + ORR1C1 LTR MaLR 1 378 0 9 1808 1831 251 143 21 chrX 160383708 160384030 -6266266 + Lx8 LINE L1 7114 7468 -5 8 1808 351 0 0 0 chrX 160384197 160384236 -6266060 + (GA)n Simple_repeat Simple_repeat 2 40 0 9 1808 637 257 33 0 chrX 160384460 160384612 -6265684 - RSINE1 SINE B4 -6 159 3 9 1808 206 340 117 26 chrX 160384821 160384975 -6265321 + MER5B DNA MER1_type 10 177 -1 9 1808 421 268 172 25 chrX 160385010 160385167 -6265129 - B3A SINE B2 -16 182 3 9 1808 421 232 184 0 chrX 160385198 160385217 -6265079 + B1F1 SINE Alu 1 143 -1 9 1808 545 198 20 0 chrX 160385217 160385318 -6264978 + ID_B1 SINE B4 116 218 -6 9 1808 1098 62 0 52 chrX 160385358 160385511 -6264785 - B1_Mm SINE Alu -2 145 1 9 1808 192 77 0 0 chrX 160385609 160385635 -6264661 + (GAA)n Simple_repeat Simple_repeat 2 27 0 9 1808 184 339 67 42 chrX 160386001 160386121 -6264175 - MIR SINE MIR -36 226 104 9 1808 836 212 129 86 chrX 160386378 160386480 -6263816 + Lx7 LINE L1 7233 7350 -346 9 1808 198 0 0 0 chrX 160386480 160386502 -6263794 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 9 1808 836 212 129 86 chrX 160386502 160386534 -6263762 + Lx7 LINE L1 7351 7377 -319 9 1808 207 69 0 0 chrX 160386534 160386563 -6263733 + (CATG)n Simple_repeat Simple_repeat 3 31 0 9 1808 836 212 129 86 chrX 160386563 160386701 -6263595 + Lx7 LINE L1 7378 7519 -177 9 1808 1087 68 0 27 chrX 160386701 160386851 -6263445 - B1_Mus2 SINE Alu 0 147 2 9 1808 836 212 129 86 chrX 160386851 160387009 -6263287 + Lx7 LINE L1 7520 7683 -13 9 1808 651 104 21 0 chrX 160387541 160387637 -6262659 - B1_Mus2 SINE Alu -3 144 47 9 1808 235 186 200 44 chrX 160387581 160387671 -6262625 - RLTR25B LTR ERVK -519 509 406 9 1808 214 250 0 146 chrX 160387950 160388039 -6262257 - PB1D7 SINE Alu -5 115 40 9 1808 931 150 13 13 chrX 160388684 160388833 -6261463 + B1_Mur3 SINE Alu 1 149 0 9 1808 260 286 0 0 chrX 160389344 160389407 -6260889 - 4.5SRNA scRNA scRNA -28 66 4 9 1808 1563 223 60 44 chrX 160389408 160389792 -6260504 + Lx6 LINE L1 7056 7445 -15 9 1808 450 264 63 0 chrX 160391069 160391234 -6259062 + MER58B DNA MER1_type 164 340 -1 9 1808 227 226 0 31 chrX 160391501 160391565 -6258731 + CT-rich Low_complexity Low_complexity 2 63 0 9 1808 329 231 0 25 chrX 160391742 160391822 -6258474 - ID4 SINE ID 0 83 6 9 1808 458 193 0 11 chrX 160391904 160391993 -6258303 - B3 SINE B2 -127 89 2 9 1808 875 250 25 0 chrX 160392034 160392234 -6258062 - B3 SINE B2 -5 211 7 9 1808 477 170 90 0 chrX 160392742 160392842 -6257454 - B1_Mur3 SINE Alu -40 109 1 9 1808 410 273 103 41 chrX 160392905 160393100 -6257196 - B3 SINE B2 -9 207 1 9 1808 329 317 29 19 chrX 160393297 160393400 -6256896 + PB1D10 SINE Alu 11 114 -3 9 1808 607 239 142 64 chrX 160393486 160393719 -6256577 + MTEa LTR MaLR 11 261 -118 9 1808 207 100 0 0 chrX 160393874 160393904 -6256392 + (CATA)n Simple_repeat Simple_repeat 2 31 0 9 1808 189 0 0 0 chrX 160393938 160393959 -6256337 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 9 1808 1033 52 71 29 chrX 160393959 160394099 -6256197 + B1_Mm SINE Alu 2 147 0 9 1808 365 250 38 0 chrX 160394132 160394212 -6256084 + B1F1 SINE Alu 6 88 -61 9 1808 348 236 35 86 chrX 160394581 160394697 -6255599 + MT2B LTR ERVL 155 264 -337 9 1808 641 178 85 0 chrX 160394597 160394726 -6255570 + B1_Mm SINE Alu 6 145 -2 9 1808 255 212 14 57 chrX 160394768 160394838 -6255458 - B1_Mus2 SINE Alu -71 76 10 9 1808 545 257 89 16 chrX 160395599 160395789 -6254507 + ID_B1 SINE B4 2 205 -19 9 1808 186 43 0 0 chrX 160395944 160395967 -6254329 + (CG)n Simple_repeat Simple_repeat 1 23 0 9 1808 205 210 16 31 chrX 160396063 160396127 -6254169 + C-rich Low_complexity Low_complexity 2 64 0 9 1808 549 202 55 74 chrX 160397032 160397207 -6253089 + B3A SINE B2 2 186 -9 9 1808 476 296 7 43 chrX 160397448 160397589 -6252707 + ID_B1 SINE B4 86 221 -3 9 1808 381 286 53 86 chrX 160397565 160397590 -6252706 + B4A SINE B4 68 160 -132 9 1808 981 65 0 21 chrX 160397590 160397731 -6252565 + B1_Mus1 SINE Alu 11 148 0 9 1808 381 286 53 86 chrX 160397731 160397752 -6252544 + B4A SINE B4 161 248 -44 9 1808 374 220 168 10 chrX 160397824 160397925 -6252371 + RSINE1 SINE B4 3 119 -46 9 1808 22 0 0 0 chrX 160397942 160397964 -6252332 + AT_rich Low_complexity Low_complexity 1 22 0 9 1808 820 163 29 17 chrX 160397972 160398147 -6252149 - RMER17B LTR ERVK -607 351 175 9 1808 200 111 28 0 chrX 160398296 160398332 -6251964 + (TTG)n Simple_repeat Simple_repeat 3 39 0 9 1808 288 0 0 0 chrX 160398332 160398364 -6251932 + (TCTTG)n Simple_repeat Simple_repeat 2 33 0 9 1808 709 203 16 0 chrX 160398367 160398495 -6251801 - B1_Mm SINE Alu -17 130 1 9 1808 719 233 153 0 chrX 160398676 160398852 -6251444 - B3 SINE B2 -10 206 4 9 1808 1158 61 7 0 chrX 160398896 160399043 -6251253 - B1_Mus1 SINE Alu 0 148 1 9 1808 434 299 44 0 chrX 160399047 160399184 -6251112 - ID_B1 SINE B4 0 224 82 9 1808 323 121 17 0 chrX 160399192 160399250 -6251046 + (TTCC)n Simple_repeat Simple_repeat 3 61 0 9 1808 732 242 0 0 chrX 160399406 160399555 -6250741 + B1_Mur3 SINE Alu 1 149 0 9 1808 282 316 104 9 chrX 160400033 160400148 -6250148 - ID_B1 SINE B4 -5 219 94 9 1808 319 336 154 0 chrX 160400669 160400818 -6249478 + MER70B LTR ERVL 1 172 -406 9 1808 518 382 54 19 chrX 160400810 160401178 -6249118 + MER70A LTR ERVL 92 472 0 9 1808 263 276 92 0 chrX 160401490 160401577 -6248719 + ID_B1 SINE B4 2 96 -128 9 1808 1381 235 33 50 chrX 160401578 160401937 -6248359 + ORR1E LTR MaLR 1 353 -6 9 1808 462 282 0 0 chrX 160401941 160402051 -6248245 + ID_B1 SINE B4 93 202 -22 9 1808 252 0 0 0 chrX 160402060 160402088 -6248208 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 1808 1615 179 96 25 chrX 160402177 160402532 -6247764 + RLTR19C LTR ERVK 127 506 0 9 1808 2606 112 160 4 chrX 160402683 160403184 -6247112 + RLTR13D6 LTR ERVK 1 579 -323 9 1808 453 115 172 0 chrX 160403169 160403237 -6247059 + B2_Mm1t SINE B2 92 160 -33 9 1808 279 0 0 0 chrX 160403237 160403268 -6247028 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 9 1808 453 115 172 0 chrX 160403268 160403286 -6247010 + B2_Mm1t SINE B2 161 191 -2 9 1808 291 133 0 0 chrX 160403284 160403329 -6246967 + RLTR13D6 LTR ERVK 560 604 -298 9 1808 288 0 0 0 chrX 160403333 160403365 -6246931 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 9 1808 249 108 0 0 chrX 160403365 160403402 -6246894 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 9 1808 1104 90 7 0 chrX 160403402 160403546 -6246750 - B1_Mm SINE Alu -1 146 2 9 1808 2254 48 24 3 chrX 160403583 160403873 -6246423 - L1Md_F2 LINE L1 -12 6570 6275 9 1808 315 202 144 48 chrX 160403996 160404100 -6246196 + ID_B1 SINE B4 104 217 -7 9 1808 315 130 0 0 chrX 160404105 160404159 -6246137 + (ATG)n Simple_repeat Simple_repeat 1 54 0 9 1808 1052 248 9 0 chrX 160404268 160404478 -6245818 + B3 SINE B2 1 212 -4 9 1808 288 130 0 0 chrX 160404896 160404942 -6245354 + (CACCAT)n Simple_repeat Simple_repeat 4 49 0 9 1808 741 253 36 52 chrX 160405103 160405295 -6245001 - B3A SINE B2 -9 189 1 9 1808 2370 139 22 15 chrX 160405321 160405730 -6244566 + MTC LTR MaLR 1 412 -9 9 1808 38 0 0 0 chrX 160405887 160405925 -6244371 + AT_rich Low_complexity Low_complexity 1 38 0 9 1808 564 284 78 93 chrX 160406020 160406214 -6244082 + RLTR12B LTR ERVK 47 244 -284 9 1808 363 44 0 0 chrX 160406214 160406259 -6244037 + (GA)n Simple_repeat Simple_repeat 1 45 0 9 1808 564 284 78 93 chrX 160406259 160406538 -6243758 + RLTR12B LTR ERVK 245 513 -15 9 1808 425 235 0 12 chrX 160406758 160406840 -6243456 - ID4_ SINE ID -2 81 1 9 1808 779 46 9 0 chrX 160406850 160406958 -6243338 + (TC)n Simple_repeat Simple_repeat 2 110 0 9 1808 207 0 0 0 chrX 160406958 160406980 -6243316 + (TG)n Simple_repeat Simple_repeat 2 24 0 9 1808 1490 204 29 107 chrX 160407109 160407520 -6242776 - MTE2a LTR MaLR 0 379 1 9 1808 1979 142 29 65 chrX 160407542 160407955 -6242341 - RMER10B LTR ERVL 0 398 1 9 1808 390 188 98 163 chrX 160408092 160408245 -6242051 - L1MB1 LINE L1 -10 6161 6019 9 1808 236 236 91 91 chrX 160408928 160409049 -6241247 - ORR1E LTR MaLR -162 197 77 9 1808 1218 249 109 32 chrX 160409225 160409964 -6240332 - L1MB1 LINE L1 -156 6012 5174 9 1808 7019 72 14 8 chrX 160410237 160411825 -6238471 + L1VL4 LINE L1 218 1817 -1742 9 1808 7741 97 14 3 chrX 160411822 160413187 -6237109 + Lx2 LINE L1 5261 6643 -354 9 1808 1271 126 42 9 chrX 160413187 160413403 -6236893 + Lx2 LINE L1 6775 6997 0 9 1808 483 18 0 0 chrX 160413801 160413857 -6236439 + (CA)n Simple_repeat Simple_repeat 2 57 0 9 1808 818 220 97 25 chrX 160413905 160414101 -6236195 + B3 SINE B2 5 214 -2 9 1808 2121 151 59 3 chrX 160414263 160414654 -6235642 + MTC LTR MaLR 1 413 -8 9 1808 1028 88 0 7 chrX 160414800 160414937 -6235359 + B1_Mus1 SINE Alu 4 139 -9 9 1808 382 240 134 10 chrX 160415015 160415112 -6235184 - RSINE1 SINE B4 -42 123 15 9 1808 333 275 70 28 chrX 160415437 160415579 -6234717 + B1_Mur3 SINE Alu 1 148 -1 9 1808 417 218 0 0 chrX 160415626 160415704 -6234592 + PB1D7 SINE Alu 35 112 -8 9 1808 851 171 0 27 chrX 160415832 160415982 -6234314 + B1_Mur2 SINE Alu 1 146 -3 9 1808 312 264 20 11 chrX 160416094 160416203 -6234093 + MER57A-int LTR ERV1 5778 5858 -329 9 1808 1174 54 0 13 chrX 160416302 160416451 -6233845 - B1_Mus1 SINE Alu 0 148 2 9 1808 1166 112 53 0 chrX 160416494 160416663 -6233633 + B2_Mm2 SINE B2 2 179 -16 9 1808 1091 75 0 0 chrX 160416663 160416797 -6233499 + B1_Mus2 SINE Alu 2 135 -12 9 1808 809 20 10 0 chrX 160416798 160416897 -6233399 + (GAAA)n Simple_repeat Simple_repeat 2 101 0 9 1808 189 0 0 0 chrX 160417369 160417390 -6232906 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 9 1808 474 285 64 16 chrX 160417393 160417518 -6232778 - B1_Mur2 SINE Alu -18 131 1 1 1808 728 190 78 68 chrX 160418263 160418455 -6231841 + B2_Mm2 SINE B2 1 194 -1 1 1808 372 305 33 33 chrX 160418469 160418639 -6231657 + RodERV21-int LTR ERV1 4400 4548 -443 1 1808 832 191 43 38 chrX 160419556 160419741 -6230555 - B2_Mm2 SINE B2 0 195 10 1 1808 261 263 49 62 chrX 160420267 160420348 -6229948 - ID4_ SINE ID -3 80 1 1 1808 422 289 163 0 chrX 160420547 160420737 -6229559 + MLT2B1 LTR ERVL 7 227 -293 1 1808 547 275 14 14 chrX 160420753 160420897 -6229399 - ID_B1 SINE B4 -4 220 77 1 1808 547 205 44 36 chrX 160420988 160421125 -6229171 + B1_Mur1 SINE Alu 11 148 -1 1 1808 363 314 144 29 chrX 160421391 160421570 -6228726 + MLT2B1 LTR ERVL 290 485 -82 1 1808 495 116 27 0 chrX 160421646 160421758 -6228538 + (TC)n Simple_repeat Simple_repeat 2 116 0 1 1808 396 0 0 0 chrX 160421758 160421802 -6228494 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1808 692 288 0 57 chrX 160421996 160422206 -6228090 + B3A SINE B2 1 198 0 1 1808 613 234 158 0 chrX 160422207 160422391 -6227905 + B3 SINE B2 4 216 0 1 1808 239 248 61 128 chrX 160422427 160422575 -6227721 - L1M5 LINE L1 -1529 4617 4480 1 1808 266 231 19 0 chrX 160422839 160422891 -6227405 - PB1D9 SINE Alu -67 53 1 1 1808 453 282 0 26 chrX 160422901 160423014 -6227282 - PB1 SINE Alu -6 121 12 1 1808 460 219 143 0 chrX 160423076 160423181 -6227115 + ID_B1 SINE B4 86 205 -19 1 1808 540 169 22 65 chrX 160423353 160423492 -6226804 + MER2 DNA MER2_type 95 227 -118 1 1808 333 270 18 198 chrX 160423471 160423688 -6226608 + MER2 DNA MER2_type 168 345 0 1 1808 297 0 0 0 chrX 160423734 160423767 -6226529 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1808 580 200 7 79 chrX 160423773 160423925 -6226371 - B3 SINE B2 -75 141 1 1 1808 21 0 0 0 chrX 160423983 160424004 -6226292 + AT_rich Low_complexity Low_complexity 1 21 0 1 1808 866 141 7 39 chrX 160424016 160424171 -6226125 + B1_Mur4 SINE Alu 1 150 0 1 1808 248 250 123 14 chrX 160424789 160424862 -6225434 + ID4_ SINE ID 3 83 0 1 1808 249 109 0 80 chrX 160424891 160424941 -6225355 + ID_B1 SINE B4 175 220 -4 1 1808 251 184 0 0 chrX 160425542 160425591 -6224705 + ID4 SINE ID 2 50 -33 1 1808 201 147 0 0 chrX 160425619 160425653 -6224643 + (GGAA)n Simple_repeat Simple_repeat 4 37 0 1 1808 487 195 8 8 chrX 160425692 160425816 -6224480 + GA-rich Low_complexity Low_complexity 4 127 0 1 1808 625 191 218 0 chrX 160426605 160426752 -6223544 - B3 SINE B2 -1 215 37 1 1808 369 206 0 0 chrX 160426763 160426831 -6223465 - PB1D10 SINE Alu -13 104 37 1 1808 752 274 17 0 chrX 160426947 160427126 -6223170 - B3A SINE B2 -16 182 1 1 1808 1366 80 5 36 chrX 160427161 160427356 -6222940 + B2_Mm2 SINE B2 2 190 -5 1 1808 623 186 0 0 chrX 160427433 160427535 -6222761 - PB1D9 SINE Alu -17 103 2 1 1808 715 213 14 7 chrX 160427680 160427822 -6222474 - B1_Mur3 SINE Alu -5 144 2 1 1808 468 0 0 0 chrX 160427863 160427915 -6222381 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 1808 509 260 8 8 chrX 160427939 160428067 -6222229 - B3A SINE B2 -66 132 5 1 1808 333 0 0 0 chrX 160428169 160428206 -6222090 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 1 1808 812 173 15 0 chrX 160428206 160428339 -6221957 - B1_Mur2 SINE Alu -14 135 1 1 1808 517 194 32 16 chrX 160429103 160429229 -6221067 + B1_Mur4 SINE Alu 15 142 -8 1 1808 369 0 0 0 chrX 160429236 160429277 -6221019 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 1808 7419 120 14 1 chrX 160429640 160431107 -6219189 + Lx LINE L1 5169 6654 0 1 1808 543 297 76 53 chrX 160431152 160431415 -6218881 + B4A SINE B4 11 279 -13 1 1809 1069 230 0 5 chrX 160432301 160432515 -6217781 - B3 SINE B2 -1 215 3 1 1809 908 299 123 42 chrX 160432871 160433301 -6216995 + MLT1F2 LTR MaLR 10 474 -86 1 1809 377 70 18 0 chrX 160433732 160433789 -6216507 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1809 314 171 132 0 chrX 160433825 160433901 -6216395 + L1M3 LINE L1 4896 4981 -1159 1 1809 417 242 131 0 chrX 160433910 160434009 -6216287 + PB1D10 SINE Alu 4 115 -2 1 1809 1191 176 39 5 chrX 160434067 160434273 -6216023 + B3 SINE B2 1 213 -3 1 1809 189 0 0 0 chrX 160434297 160434318 -6215978 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 1809 320 214 84 8 chrX 160434319 160434441 -6215855 + Lx8 LINE L1 5804 5936 -364 1 1809 433 286 86 5 chrX 160434763 160434949 -6215347 - L1M4 LINE L1 -2995 3151 2951 1 1809 452 208 108 0 chrX 160435662 160435782 -6214514 + ID_B1 SINE B4 90 222 -2 1 1809 631 309 77 15 chrX 160436320 160436593 -6213703 + B4A SINE B4 3 292 0 1 1809 537 135 0 0 chrX 160436723 160436812 -6213484 + (GA)n Simple_repeat Simple_repeat 1 89 0 1 1809 445 288 14 14 chrX 160437330 160437478 -6212818 - B1_Mur2 SINE Alu 0 149 2 1 1809 21 82 0 0 chrX 160437692 160437741 -6212555 + AT_rich Low_complexity Low_complexity 1 49 0 1 1809 899 173 54 5 chrX 160437915 160438101 -6212195 - B2_Mm2 SINE B2 0 195 1 1 1809 1817 125 0 0 chrX 160439198 160439462 -6210834 + Lx7 LINE L1 4887 5150 -730 1 1809 1937 110 29 0 chrX 160439462 160439772 -6210524 + ORR1A2 LTR MaLR 1 319 -8 1 1809 440 127 0 14 chrX 160439776 160439848 -6210448 + Lx7 LINE L1 5146 5216 -664 1 1809 8050 185 91 29 chrX 160439847 160441829 -6208467 + Lx7 LINE L1 5442 7538 -158 1 1809 255 164 0 83 chrX 160441845 160441905 -6208391 + B1_Mus2 SINE Alu 75 129 -18 1 1809 285 98 0 0 chrX 160441908 160441949 -6208347 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1 1809 828 167 14 20 chrX 160441958 160442105 -6208191 + B1_Mur4 SINE Alu 2 147 -3 1 1809 556 235 0 0 chrX 160442166 160442285 -6208011 - B1_Mur4 SINE Alu -28 122 4 1 1809 580 317 32 0 chrX 160442369 160442555 -6207741 + B3A SINE B2 4 195 -3 1 1809 296 282 160 17 chrX 160442864 160442983 -6207313 + MER20 DNA MER1_type 6 141 -78 1 1809 220 290 0 16 chrX 160443551 160443614 -6206682 + ID2 SINE ID 21 82 -1 1 1809 441 269 23 23 chrX 160443830 160443963 -6206333 - MLT1A0 LTR MaLR -24 341 209 1 1809 5675 38 0 0 chrX 160443993 160444652 -6205644 - L1Md_F3 LINE L1 -23 6561 5903 1 1809 342 331 27 8 chrX 160444652 160444790 -6205506 - MLT1A0 LTR MaLR -222 152 1 1 1809 2601 143 18 14 chrX 160444865 160445310 -6204986 + Lx5 LINE L1 5843 6289 -761 1 1809 707 263 15 17 chrX 160445310 160445532 -6204764 + MLT1A1 LTR MaLR 169 408 0 1 1809 605 159 21 14 chrX 160445694 160445834 -6204462 + CT-rich Low_complexity Low_complexity 4 144 0 1 1809 786 196 0 7 chrX 160445835 160445979 -6204317 - B1_Mur4 SINE Alu -7 143 1 1 1809 863 199 39 6 chrX 160446614 160446796 -6203500 + ID_B1 SINE B4 29 216 -8 1 1809 1883 211 32 25 chrX 160446890 160447323 -6202973 + Lx9 LINE L1 7208 7643 -1 1 1809 268 214 127 45 chrX 160447710 160447917 -6202379 + MER33 DNA MER1_type 58 269 -55 1 1809 776 224 128 0 chrX 160447922 160448101 -6202195 - B3 SINE B2 -13 203 2 1 1809 338 309 9 70 chrX 160448695 160448810 -6201486 - PB1D10 SINE Alu -4 113 6 1 1809 918 223 0 26 chrX 160448837 160449030 -6201266 + B3A SINE B2 2 189 -9 1 1809 539 162 124 0 chrX 160449205 160449310 -6200986 - PB1D9 SINE Alu -2 118 1 1 1809 312 70 0 0 chrX 160449429 160449472 -6200824 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1 1809 611 160 192 31 chrX 160449472 160449633 -6200663 - B3A SINE B2 -10 188 2 1 1809 682 227 21 0 chrX 160449942 160450083 -6200213 + ID_B1 SINE B4 81 224 0 1 1809 249 325 0 152 chrX 160450528 160450613 -6199683 + ID_B1 SINE B4 81 147 -77 1 1809 1175 104 54 16 chrX 160450613 160450798 -6199498 + B2_Mm2 SINE B2 1 192 -3 1 1809 249 325 0 152 chrX 160450798 160450857 -6199439 + ID_B1 SINE B4 148 203 -21 1 1809 961 143 0 0 chrX 160452257 160452404 -6197892 + B1_Mur4 SINE Alu 1 147 -3 1 1809 360 111 0 0 chrX 160452404 160452458 -6197838 + (TGGA)n Simple_repeat Simple_repeat 4 57 0 1 1809 302 0 0 26 chrX 160453435 160453474 -6196822 + (CTAAA)n Simple_repeat Simple_repeat 3 40 0 1 1809 1160 137 21 10 chrX 160453488 160453680 -6196616 + B2_Mm2 SINE B2 2 195 0 1 1809 200 355 62 42 chrX 160454059 160454300 -6195996 + L2b LINE L2 3066 3311 -64 1 1809 1119 211 9 9 chrX 160454332 160454547 -6195749 + B3 SINE B2 1 215 -1 1 1809 350 208 83 0 chrX 160454686 160454758 -6195538 - ID4 SINE ID -1 82 5 1 1809 958 212 77 13 chrX 160455083 160455317 -6194979 - MTD LTR MaLR -67 352 104 1 1809 720 236 0 0 chrX 160455598 160455738 -6194558 + ID_B1 SINE B4 78 217 -7 1 1809 367 254 30 83 chrX 160455759 160455892 -6194404 + RSINE1 SINE B4 17 142 -23 1 1809 21 0 0 0 chrX 160455900 160455921 -6194375 + AT_rich Low_complexity Low_complexity 1 21 0 1 1809 252 287 221 0 chrX 160456080 160456216 -6194080 + L1MB5 LINE L1 5966 6131 -43 1 1809 951 256 10 0 chrX 160456815 160457014 -6193282 + B4A SINE B4 1 201 -91 1 1809 4694 71 8 0 chrX 160457015 160457631 -6192665 + L1_Mus3 LINE L1 6018 6638 0 1 1809 403 253 39 147 chrX 160457983 160458187 -6192109 - B3A SINE B2 -16 182 1 1 1809 3092 45 3 0 chrX 160458379 160458754 -6191542 + L1Md_F2 LINE L1 5210 5585 -298 1 1809 8001 58 1 5 chrX 160458755 160459752 -6190544 + L1Md_F2 LINE L1 5587 6579 -3 1 1809 533 185 93 0 chrX 160460068 160460176 -6190120 + B1_Mur4 SINE Alu 3 120 -30 1 1809 180 0 0 0 chrX 160460190 160460210 -6190086 + (TGG)n Simple_repeat Simple_repeat 2 21 0 1 1809 305 247 153 31 chrX 160460662 160460825 -6189471 - L1MB3 LINE L1 -9 6174 5992 1 1809 235 258 15 0 chrX 160461736 160461802 -6188494 + LTR86C LTR ERVL 466 532 -89 1 1809 831 229 5 35 chrX 160461820 160462019 -6188277 + ID_B1 SINE B4 8 200 -24 1 1809 441 0 0 0 chrX 160462021 160462070 -6188226 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1809 271 306 193 47 chrX 160462430 160462704 -6187592 - L2a LINE L2 -5 3421 3108 1 1809 432 323 96 15 chrX 160462926 160463124 -6187172 - MER20 DNA MER1_type 0 219 6 1 1809 1154 55 7 0 chrX 160463249 160463394 -6186902 + B1_Mus2 SINE Alu 2 147 0 1 1809 568 238 36 0 chrX 160463433 160463568 -6186728 + B1F1 SINE Alu 1 148 -1 1 1809 812 182 188 27 chrX 160466505 160466691 -6183605 + B3 SINE B2 1 216 0 1 1809 212 0 0 159 chrX 160466767 160466943 -6183353 + (CAAGG)n Simple_repeat Simple_repeat 5 152 0 1 1809 906 185 106 26 chrX 160467432 160467457 -6182839 - B3 SINE B2 -10 206 185 1 1809 312 70 0 0 chrX 160467457 160467500 -6182796 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1809 180 0 0 0 chrX 160467500 160467519 -6182777 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 1809 906 185 106 26 chrX 160467519 160467681 -6182615 - B3 SINE B2 -32 184 4 1 1809 216 0 0 0 chrX 160467747 160467771 -6182525 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1809 1178 81 0 0 chrX 160467913 160468061 -6182235 + B1_Mus1 SINE Alu 1 148 0 1 1809 415 264 141 0 chrX 160468670 160468791 -6181505 + B1_Mur2 SINE Alu 6 143 -6 1 1809 234 179 87 29 chrX 160468938 160469007 -6181289 + MLT2B4 LTR ERVL 1 73 -483 1 1809 975 245 0 0 chrX 160469007 160469223 -6181073 + B3 SINE B2 1 216 0 1 1809 517 286 57 78 chrX 160469411 160469604 -6180692 + MTEa LTR MaLR 6 194 -185 1 1809 554 292 140 46 chrX 160469608 160469973 -6180323 + MTD LTR MaLR 5 398 -21 1 1809 302 251 9 24 chrX 160470033 160470144 -6180152 + MTEa LTR MaLR 257 359 0 1 1809 309 286 22 11 chrX 160470278 160470370 -6179926 + RSINE1 SINE B4 13 105 -60 1 1809 491 281 48 5 chrX 160470541 160470727 -6179569 + MER117 DNA MER1_type 4 197 0 1 1809 2302 128 13 21 chrX 160470965 160471339 -6178957 - ORR1D1 LTR MaLR -3 371 1 1 1809 426 176 0 0 chrX 160471618 160471686 -6178610 + PB1D9 SINE Alu 1 68 -52 1 1809 1950 144 115 39 chrX 160472370 160472666 -6177630 - MTC LTR MaLR -10 411 81 1 1809 828 92 0 0 chrX 160472666 160472785 -6177511 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 1 1809 1162 78 0 0 chrX 160472788 160472929 -6177367 - B1_Mus1 SINE Alu -7 141 1 1 1809 1950 144 115 39 chrX 160472929 160473010 -6177286 - MTC LTR MaLR -341 80 1 1 1809 503 177 147 39 chrX 160473014 160473143 -6177153 + B1_Mur2 SINE Alu 7 149 0 1 1809 870 203 14 38 chrX 160473180 160473390 -6176906 + B3 SINE B2 8 212 -4 1 1809 785 154 13 26 chrX 160473535 160473688 -6176608 + ORR1C2 LTR MaLR 234 384 0 1 1809 797 256 80 38 chrX 160473689 160473977 -6176319 - L1M2 LINE L1 -578 5722 5423 1 1809 669 276 36 6 chrX 160474276 160474529 -6175767 + L1M3 LINE L1 5081 5330 -816 1 1809 483 214 116 0 chrX 160474532 160474644 -6175652 + ID_B1 SINE B4 81 205 -19 1 1809 527 187 133 55 chrX 160474847 160475028 -6175268 - B3A SINE B2 -3 195 1 1 1809 320 271 56 9 chrX 160475177 160475285 -6175011 + RMER15 LTR ERVL 446 558 -17 1 1809 1097 269 74 37 chrX 160475344 160475372 -6174924 - Lx8 LINE L1 0 7473 7441 1 1809 799 203 0 14 chrX 160475372 160475517 -6174779 + B1_Mur2 SINE Alu 2 144 -5 1 1809 1097 269 74 37 chrX 160475517 160475975 -6174321 - Lx8 LINE L1 -33 7440 6970 1 1809 958 211 19 32 chrX 160476004 160476220 -6174076 + B3 SINE B2 3 215 -1 1 1809 225 313 19 48 chrX 160476511 160476615 -6173681 + MamRep1879 DNA hAT? 115 215 -1 1 1809 2911 182 76 48 chrX 160477200 160477910 -6172386 + L1VL2 LINE L1 59 788 -5547 1 1809 412 82 27 14 chrX 160477902 160477976 -6172320 - L1VL4 LINE L1 -5480 822 748 1 1809 4554 108 31 9 chrX 160477973 160478715 -6171581 + MusHAL1 LINE L1 600 1357 -1355 1 1809 1695 133 3 18 chrX 160478713 160478996 -6171300 + L1_Mur2 LINE L1 4217 4495 -1382 1 1809 4675 144 32 0 chrX 160478997 160479784 -6170512 + L1_Mm LINE L1 4979 5790 -93 1 1809 831 97 90 0 chrX 160479784 160479939 -6170357 + L1_Mus3 LINE L1 6469 6637 -1 1 1809 6035 128 21 8 chrX 160480589 160481541 -6168755 + Lx2 LINE L1 5987 6950 -47 1 1809 1658 142 29 0 chrX 160481542 160481817 -6168479 - RMER19B LTR ERVK -619 283 1 1 1809 265 316 133 25 chrX 160481819 160481939 -6168357 + MLT1B LTR MaLR 126 258 -132 1 1809 343 292 112 9 chrX 160482122 160482336 -6167960 + Cheshire DNA MER1_type 88 323 -18 1 1809 1226 48 0 7 chrX 160482446 160482594 -6167702 - B1_Mus2 SINE Alu 0 147 1 1 1809 663 260 0 65 chrX 160482602 160482782 -6167514 - ID_B1 SINE B4 0 224 57 1 1809 377 288 66 24 chrX 160482782 160482949 -6167347 - MER45A DNA Tip100 -1 177 4 1 1809 650 268 0 52 chrX 160483205 160483378 -6166918 - RSINE1 SINE B4 -1 164 1 1 1809 674 252 179 43 chrX 160483505 160483762 -6166534 + B4 SINE B4 1 292 0 1 1809 361 286 169 6 chrX 160484454 160484637 -6165659 + ID_B1 SINE B4 1 213 -11 1 1809 1881 178 33 25 chrX 160484637 160485001 -6165295 - ORR1C1 LTR MaLR -11 367 1 1 1809 1088 249 77 24 chrX 160485119 160485456 -6164840 - ORR1E LTR MaLR 0 359 5 1 1809 2263 180 20 84 chrX 160485535 160486044 -6164252 - RLTR18B LTR ERVK -4 508 33 1 1809 4044 64 54 9 chrX 160486273 160486809 -6163487 - LTRIS2 LTR ERV1 0 564 5 1 1809 966 211 38 29 chrX 160486809 160487037 -6163259 - RLTR1B-int LTR ERV1 -42 5021 4791 1 1809 9267 141 84 53 chrX 160487130 160489801 -6160495 - RLTR1B-int LTR ERV1 -486 2813 760 1 1809 4390 135 61 17 chrX 160489792 160490515 -6159781 - RMER16-int LTR ERVK -3962 1444 690 1 1809 762 158 71 106 chrX 160490501 160490699 -6159597 - RMER16-int LTR ERVK -5075 331 141 1 1809 666 126 56 13 chrX 160491050 160491216 -6159080 - RLTR1B-int LTR ERV1 -3011 288 63 1 1809 259 207 24 105 chrX 160491245 160491369 -6158927 - RLTR1B-int LTR ERV1 -3584 114 1 1 1809 4087 64 52 9 chrX 160491369 160491906 -6158390 - LTRIS2 LTR ERV1 0 564 5 1 1809 379 151 27 14 chrX 160492392 160492466 -6157830 - RLTR18B LTR ERVK -437 75 1 1 1809 702 133 58 0 chrX 160492540 160492660 -6157636 - B3 SINE B2 -87 129 3 1 1809 393 308 54 0 chrX 160492707 160492837 -6157459 - B1_Mur1 SINE Alu -12 137 1 1 1809 566 256 39 0 chrX 160493087 160493216 -6157080 + RSINE1 SINE B4 2 135 -30 1 1809 21 0 0 0 chrX 160493234 160493255 -6157041 + AT_rich Low_complexity Low_complexity 1 21 0 1 1809 262 290 29 0 chrX 160493469 160493538 -6156758 - RMER13A LTR ERVK -191 669 599 1 1809 836 263 164 65 chrX 160493587 160493990 -6156306 - RMER13A LTR ERVK -395 465 23 1 1809 218 236 0 35 chrX 160494380 160494437 -6155859 + CT-rich Low_complexity Low_complexity 1 55 0 1 1809 881 222 220 82 chrX 160494573 160494941 -6155355 + MTD LTR MaLR 1 419 0 1 1809 1365 151 223 0 chrX 160494990 160495295 -6155001 - ORR1C1 LTR MaLR 0 378 6 1 1809 649 210 29 0 chrX 160495306 160495444 -6154852 - B1_Mur1 SINE Alu -6 143 2 1 1809 207 0 0 0 chrX 160495506 160495529 -6154767 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1809 236 282 120 0 chrX 160495600 160495717 -6154579 - L1MD3 LINE L1 -80 7915 7785 1 1809 665 209 55 65 chrX 160495804 160496004 -6154292 - B3A SINE B2 0 198 1 1 1809 624 201 20 75 chrX 160496297 160496496 -6153800 - RMER10A LTR ERVL -2 440 253 1 1809 383 270 104 49 chrX 160496645 160496789 -6153507 - RLTR14-int LTR ERV1 -4134 1183 1032 1 1809 387 261 76 33 chrX 160497081 160497253 -6153043 - RLTR6-int LTR ERV1 -6312 1466 1158 1 1809 268 223 59 69 chrX 160498142 160498243 -6152053 - RLTR23 LTR ERV1 0 430 331 1 1809 942 104 97 68 chrX 160499386 160499562 -6150734 - B2_Mm2 SINE B2 -14 181 1 1 1809 925 195 24 38 chrX 160499707 160500000 -6150296 - RMER17C LTR ERVK 0 410 122 1 1809 698 169 75 6 chrX 160500000 160500161 -6150135 - RMER17B LTR ERVK -604 354 183 1 1809 606 140 0 0 chrX 160500193 160500293 -6150003 + (TA)n Simple_repeat Simple_repeat 1 100 0 2 1809 2131 130 56 39 chrX 160500562 160501027 -6149269 - RMER6A LTR ERVK 0 756 284 3 1809 297 111 203 16 chrX 160501752 160501816 -6148480 + RLTR19-int LTR ERVK 987 1062 -5075 4 1809 745 198 98 11 chrX 160501853 160502027 -6148269 + RLTR19-int LTR ERVK 2323 2511 -3626 4 1809 356 294 113 30 chrX 160502023 160502226 -6148070 + RLTR19-int LTR ERVK 2960 3179 -59 4 1809 2261 113 21 93 chrX 160502251 160502680 -6147616 + RMER10B LTR ERVL 1 398 0 5 1809 817 158 7 0 chrX 160502680 160502832 -6147464 + URR1A DNA MER1_type 70 222 -4 6 1809 432 0 0 0 chrX 160503046 160503094 -6147202 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 1809 1367 87 16 0 chrX 160503104 160503289 -6147007 + B2_Mm2 SINE B2 2 189 -6 8 1809 180 0 0 0 chrX 160503967 160503987 -6146309 + (A)n Simple_repeat Simple_repeat 1 20 0 9 1809 747 156 150 0 chrX 160504420 160504580 -6145716 - URR1A DNA MER1_type -42 184 1 1 1809 264 194 125 0 chrX 160505163 160505235 -6145061 - PB1D7 SINE Alu -6 114 34 1 1809 622 133 29 0 chrX 160505456 160505561 -6144735 + B1_Mus2 SINE Alu 33 140 -7 1 1809 249 224 0 0 chrX 160505574 160505632 -6144664 + GA-rich Low_complexity Low_complexity 1 58 0 1 1809 2833 121 59 85 chrX 160505846 160506388 -6143908 - RLTR24 LTR ERV1 -1 528 1 1 1809 1095 102 0 0 chrX 160506456 160506613 -6143683 - B2_Mm2 SINE B2 -37 158 2 1 1809 254 264 38 83 chrX 160507229 160507301 -6142995 + MER33 DNA MER1_type 150 219 -105 1 1809 472 274 8 0 chrX 160507301 160507418 -6142878 + PB1D9 SINE Alu 3 120 0 1 1809 254 264 38 83 chrX 160507418 160507502 -6142794 + MER33 DNA MER1_type 220 299 -25 1 1809 303 212 26 58 chrX 160508187 160508213 -6142083 + ORR1B1-int LTR MaLR 605 623 -886 1 1809 1263 34 0 0 chrX 160508213 160508360 -6141936 + B1_Mm SINE Alu 1 147 0 1 1809 303 212 26 58 chrX 160508360 160508381 -6141915 + ORR1B1-int LTR MaLR 624 647 -862 1 1809 899 65 0 0 chrX 160508381 160508505 -6141791 + B1_Mus2 SINE Alu 1 124 -23 2 1809 315 191 0 0 chrX 160510051 160510114 -6140182 + (CCG)n Simple_repeat Simple_repeat 2 64 0 2 1809 1017 73 73 0 chrX 160511076 160511212 -6139084 - B1_Mus2 SINE Alu 0 147 2 2 1809 392 277 76 43 chrX 160512287 160512472 -6137824 + B3A SINE B2 5 195 -3 2 1809 2702 120 133 7 chrX 160512528 160512971 -6137325 - RLTR19 LTR ERVK 0 499 1 2 1809 182 37 37 0 chrX 160514775 160514802 -6135494 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 2 1809 204 37 0 0 chrX 160514934 160514956 -6135340 + (T)n Simple_repeat Simple_repeat 1 22 0 2 1809 1196 55 0 7 chrX 160514956 160515104 -6135192 - B1_Mus2 SINE Alu 0 147 1 2 1809 234 0 0 0 chrX 160515902 160515928 -6134368 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1809 385 220 62 27 chrX 160515928 160516032 -6134264 - PB1D7 SINE Alu -9 111 1 2 1809 784 72 0 9 chrX 160516062 160516174 -6134122 - B2_Mm1t SINE B2 -82 111 1 3 1809 572 162 0 28 chrX 160516802 160516910 -6133386 + B1_Mus2 SINE Alu 43 147 0 3 1809 363 44 0 0 chrX 160517175 160517220 -6133076 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1809 382 287 35 7 chrX 160517550 160517694 -6132602 - MER57-int LTR ERV1 -232 7305 7158 3 1809 558 155 284 0 chrX 160517854 160517970 -6132326 + B1_Mur2 SINE Alu 1 149 0 3 1809 288 234 104 0 chrX 160518211 160518288 -6132008 + Lx7 LINE L1 7251 7335 -361 3 1809 564 15 0 0 chrX 160518301 160518366 -6131930 + (TTTC)n Simple_repeat Simple_repeat 4 68 0 3 1809 360 0 0 0 chrX 160518410 160518450 -6131846 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 1809 887 234 248 132 chrX 160518820 160519377 -6130919 + Lx7 LINE L1 7051 7672 -24 3 1809 763 199 227 0 chrX 160519379 160519555 -6130741 + B3 SINE B2 1 216 0 3 1809 1360 89 0 10 chrX 160519634 160519826 -6130470 - B2_Mm2 SINE B2 -4 191 2 4 1809 342 0 0 0 chrX 160519847 160519885 -6130411 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 4 1809 1186 22 0 0 chrX 160519885 160520022 -6130274 - B1_Mm SINE Alu -10 137 1 4 1809 789 220 34 29 chrX 160520029 160520235 -6130061 - B3 SINE B2 -6 210 4 4 1809 405 326 28 21 chrX 160520404 160520548 -6129748 - MER20 DNA MER1_type -74 145 1 4 1809 855 159 0 0 chrX 160520557 160520695 -6129601 + B1_Mur1 SINE Alu 12 149 0 4 1809 503 197 203 8 chrX 160520914 160521037 -6129259 + B1_Mur2 SINE Alu 2 148 -1 4 1809 196 137 19 19 chrX 160521037 160521089 -6129207 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 4 1809 452 264 20 27 chrX 160521480 160521628 -6128668 + ID_B1 SINE B4 77 223 -1 4 1809 378 0 0 0 chrX 160521639 160521681 -6128615 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1809 258 184 122 0 chrX 160521684 160521733 -6128563 + ID4 SINE ID 26 80 -3 5 1809 296 78 0 38 chrX 160521738 160521791 -6128505 + (CAGA)n Simple_repeat Simple_repeat 4 54 0 5 1809 596 271 14 14 chrX 160521808 160521950 -6128346 + RSINE1 SINE B4 9 150 -15 5 1809 288 156 18 0 chrX 160522436 160522497 -6127799 - B1_Mur4 SINE Alu -83 65 4 5 1809 267 122 0 0 chrX 160522497 160522537 -6127759 - B3 SINE B2 -176 40 1 5 1809 667 223 189 0 chrX 160522575 160522750 -6127546 + B3 SINE B2 2 209 -7 5 1809 239 250 15 36 chrX 160522858 160522889 -6127407 + ORR1B1-int LTR MaLR 620 647 -862 5 1809 907 56 8 0 chrX 160522889 160523014 -6127282 + B1_Mm SINE Alu 1 126 -21 5 1809 245 265 152 64 chrX 160523331 160523342 -6126954 + B4 SINE B4 69 80 -212 5 1809 495 213 55 28 chrX 160523342 160523487 -6126809 + B1F SINE Alu 1 149 0 5 1809 245 265 152 64 chrX 160523487 160523600 -6126696 + B4 SINE B4 81 203 -89 5 1809 599 105 108 54 chrX 160523508 160523619 -6126677 + B1_Mur1 SINE Alu 18 134 -15 6 1809 411 73 0 0 chrX 160523619 160523674 -6126622 + (TAAA)n Simple_repeat Simple_repeat 1 55 0 6 1809 551 305 15 55 chrX 160523864 160524065 -6126231 + B3A SINE B2 6 198 0 6 1809 689 219 0 7 chrX 160524149 160524296 -6126000 + B1_Mur1 SINE Alu 2 147 -2 6 1809 2096 24 4 27 chrX 160524296 160524556 -6125740 + L1Md_F2 LINE L1 6329 6582 0 6 1809 503 158 131 73 chrX 160524569 160524706 -6125590 + B1_Mur2 SINE Alu 5 149 0 6 1809 277 331 0 44 chrX 160525193 160525329 -6124967 + RSINE1 SINE B4 2 131 -34 6 1809 290 309 129 67 chrX 160525465 160525650 -6124646 + B4A SINE B4 99 292 0 6 1809 448 292 69 0 chrX 160525911 160526041 -6124255 + ID_B1 SINE B4 85 223 -1 6 1809 442 189 0 18 chrX 160526041 160526154 -6124142 + GA-rich Low_complexity Low_complexity 1 111 0 6 1809 342 117 0 0 chrX 160526279 160526339 -6123957 - B3 SINE B2 -4 212 153 7 1809 329 97 32 0 chrX 160526369 160526431 -6123865 + (CAGAGA)n Simple_repeat Simple_repeat 3 66 0 7 1809 402 74 0 0 chrX 160527564 160527618 -6122678 + (CACCAT)n Simple_repeat Simple_repeat 5 58 0 7 1809 240 289 45 45 chrX 160529526 160529660 -6120636 - MIR SINE MIR -114 148 15 7 1809 183 264 19 0 chrX 160530125 160530178 -6120118 - L2 LINE L2 -1311 2108 2055 7 1809 351 250 0 12 chrX 160530353 160530434 -6119862 + ID4_ SINE ID 1 80 -3 7 1809 298 215 183 0 chrX 160530436 160530529 -6119767 + ID_B1 SINE B4 99 208 -16 7 1809 273 208 69 0 chrX 160530903 160530975 -6119321 + BC1_Mm scRNA scRNA 1 77 -75 7 1809 22 0 0 0 chrX 160532070 160532092 -6118204 + AT_rich Low_complexity Low_complexity 1 22 0 7 1809 848 232 0 0 chrX 160532096 160532251 -6118045 - B3A SINE B2 -42 156 2 7 1809 464 258 0 48 chrX 160532261 160532387 -6117909 - B1F1 SINE Alu -4 145 26 8 1809 474 70 0 0 chrX 160532427 160532498 -6117798 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 8 1809 28 29 0 0 chrX 160533006 160533041 -6117255 + AT_rich Low_complexity Low_complexity 1 35 0 8 1809 628 302 12 6 chrX 160533070 160533230 -6117066 - RSINE1 SINE B4 -2 163 3 8 1809 561 271 0 0 chrX 160533250 160533372 -6116924 - B1F1 SINE Alu -26 123 2 8 1809 745 140 81 0 chrX 160533672 160533808 -6116488 - B1_Mur2 SINE Alu 0 149 3 8 1809 596 246 15 15 chrX 160534223 160534359 -6115937 - ID_B1 SINE B4 -11 213 78 8 1809 486 242 96 8 chrX 160534567 160534692 -6115604 + B1_Mur1 SINE Alu 3 138 -11 8 1809 315 71 0 0 chrX 160534692 160534734 -6115562 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 1809 768 239 158 50 chrX 160534914 160535174 -6115122 - B4A SINE B4 -4 288 1 8 1809 25 65 0 0 chrX 160535198 160535244 -6115052 + AT_rich Low_complexity Low_complexity 1 46 0 9 1809 338 152 24 48 chrX 160535333 160535416 -6114880 - Lx8 LINE L1 -2 7471 7391 9 1809 381 260 188 52 chrX 160535454 160535608 -6114688 + B3A SINE B2 11 185 -13 9 1809 893 211 5 77 chrX 160537260 160537437 -6112859 + B3 SINE B2 2 167 -49 9 1809 2967 118 51 86 chrX 160537437 160537985 -6112311 - RLTR24 LTR ERV1 0 529 1 9 1809 893 211 5 77 chrX 160537985 160538002 -6112294 + B3 SINE B2 168 182 -34 9 1809 954 126 0 34 chrX 160538166 160538314 -6111982 - B1_Mur4 SINE Alu -2 148 6 9 1809 396 0 0 0 chrX 160538334 160538378 -6111918 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 9 1809 261 0 0 0 chrX 160538383 160538412 -6111884 + (TG)n Simple_repeat Simple_repeat 1 29 0 9 1809 681 250 14 0 chrX 160538414 160538562 -6111734 - B3A SINE B2 -48 150 1 9 1809 336 177 16 0 chrX 160538616 160538678 -6111618 + MER20 DNA MER1_type 23 85 -134 9 1809 242 237 79 40 chrX 160538786 160538887 -6111409 - L1M2 LINE L1 -509 5803 5699 1 1809 692 215 85 23 chrX 160539085 160539261 -6111035 + B3A SINE B2 1 187 -11 1 1809 225 0 0 0 chrX 160539444 160539469 -6110827 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1809 450 0 0 0 chrX 160539469 160539518 -6110778 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 1809 420 20 0 0 chrX 160539666 160539715 -6110581 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 1 1809 1260 152 75 9 chrX 160540470 160540682 -6109614 - URR1A DNA MER1_type 0 226 1 1 1809 582 15 0 0 chrX 160541560 160541627 -6108669 + (GA)n Simple_repeat Simple_repeat 1 67 0 1 1809 229 26 26 26 chrX 160541817 160541856 -6108440 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1 1809 676 148 161 15 chrX 160541938 160542068 -6108228 - B1_Mur4 SINE Alu 0 150 2 1 1809 2638 265 36 45 chrX 160542088 160542895 -6107401 - Lx8 LINE L1 -35 7438 6639 1 1809 840 110 0 0 chrX 160542929 160543047 -6107249 - B1_Mur4 SINE Alu -13 137 20 1 1809 5217 91 17 3 chrX 160543057 160543771 -6106525 - L1Md_F2 LINE L1 -1 6581 5858 1 1809 628 264 35 45 chrX 160544189 160544391 -6105905 + MER20 DNA MER1_type 1 200 -19 1 1809 256 301 47 24 chrX 160544415 160544500 -6105796 + MER20 DNA MER1_type 114 200 -19 9 1809 308 287 74 34 chrX 160545072 160545288 -6105008 + RSINE1 SINE B4 3 234 -58 1 1809 919 136 7 39 chrX 160545727 160545880 -6104416 + B1_Mus1 SINE Alu 1 148 0 1 1809 221 254 0 15 chrX 160546185 160546253 -6104043 + T-rich Low_complexity Low_complexity 2 68 0 1 1809 1325 77 16 27 chrX 160546469 160546657 -6103639 - B2_Mm2 SINE B2 -8 187 2 1 1809 495 0 0 0 chrX 160546882 160546937 -6103359 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 1809 240 111 0 0 chrX 160546937 160546972 -6103324 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1809 374 322 0 33 chrX 160546974 160547096 -6103200 - RSINE1 SINE B4 -46 119 2 1 1809 1030 259 89 49 chrX 160547162 160547531 -6102765 - MTD LTR MaLR -14 405 22 1 1809 1116 0 0 0 chrX 160547691 160547815 -6102481 + (TTCTC)n Simple_repeat Simple_repeat 3 126 0 1 1809 597 256 33 22 chrX 160548241 160548421 -6101875 - B3A SINE B2 -16 182 1 1 1809 207 342 25 0 chrX 160549269 160549348 -6100948 + MIR SINE MIR 182 262 0 1 1809 684 245 0 0 chrX 160549723 160549862 -6100434 - ID_B1 SINE B4 -5 219 81 1 1809 261 256 20 91 chrX 160549781 160549880 -6100416 - MT2B2 LTR ERVL -346 238 147 1 1809 437 243 121 34 chrX 160549941 160550090 -6100206 + RSINE1 SINE B4 3 164 -1 1 1809 489 198 0 0 chrX 160550410 160550511 -6099785 + (TA)n Simple_repeat Simple_repeat 1 101 0 1 1809 484 204 0 0 chrX 160550523 160550616 -6099680 - PB1D9 SINE Alu -27 93 1 1 1809 199 366 26 9 chrX 160551058 160551171 -6099125 + MIRb SINE MIR 104 218 -50 1 1809 279 0 0 0 chrX 160552329 160552360 -6097936 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 1809 242 259 0 0 chrX 160552377 160552435 -6097861 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 1809 590 259 7 7 chrX 160552460 160552600 -6097696 - B1_Mur1 SINE Alu -1 148 9 1 1809 469 267 0 64 chrX 160552600 160552616 -6097680 - ID_B1 SINE B4 -1 223 78 1 1809 3080 109 49 4 chrX 160552758 160553228 -6097068 - Lx3B LINE L1 -1 6972 6482 1 1809 252 0 0 0 chrX 160553249 160553277 -6097019 + (TTA)n Simple_repeat Simple_repeat 3 30 0 1 1809 342 0 0 0 chrX 160553279 160553317 -6096979 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1809 413 218 92 0 chrX 160553320 160553407 -6096889 - RSINE1 SINE B4 -23 142 48 1 1809 276 130 0 0 chrX 160554358 160554404 -6095892 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 1 1809 617 216 90 0 chrX 160554520 160554654 -6095642 - B1_Mus1 SINE Alu 0 148 3 1 1809 292 265 204 25 chrX 160554817 160554955 -6095341 - L1MC4 LINE L1 -729 7313 7160 1 1809 188 35 35 0 chrX 160554955 160554984 -6095312 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1 1809 292 265 204 25 chrX 160554984 160555046 -6095250 - L1MC4 LINE L1 -883 7159 7077 1 1809 270 0 0 0 chrX 160555591 160555621 -6094675 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1 1809 805 194 0 7 chrX 160555621 160555761 -6094535 - B1_Mur3 SINE Alu -10 139 1 1 1809 778 114 116 43 chrX 160556928 160557066 -6093230 - B1_Mus1 SINE Alu 0 148 1 1 1809 641 248 6 78 chrX 160557205 160557371 -6092925 - RSINE1 SINE B4 0 165 12 1 1809 723 248 14 14 chrX 160557466 160557609 -6092687 - B1_Mur1 SINE Alu -5 144 2 1 1809 547 250 75 72 chrX 160557610 160557903 -6092393 - L1MA6 LINE L1 -51 6249 5956 1 1809 328 299 8 17 chrX 160557907 160558026 -6092270 - BC1_Mm scRNA scRNA -31 121 4 1 1809 567 247 123 26 chrX 160558134 160558329 -6091967 - B3 SINE B2 0 216 3 1 1809 255 244 35 93 chrX 160558511 160558597 -6091699 + MER106A DNA MER1_type 55 135 -101 1 1809 216 0 0 0 chrX 160559081 160559105 -6091191 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1809 237 268 13 90 chrX 160559329 160559407 -6090889 + ID2 SINE ID 1 72 -11 1 1809 465 19 0 0 chrX 160559407 160559461 -6090835 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1809 1515 168 121 53 chrX 160559597 160560011 -6090285 + RMER10A LTR ERVL 1 442 0 1 1809 611 154 0 8 chrX 160560106 160560224 -6090072 + GA-rich Low_complexity Low_complexity 1 117 0 1 1809 351 294 0 52 chrX 160560514 160560629 -6089667 + PB1 SINE Alu 1 109 -18 1 1809 5473 48 11 35 chrX 160560854 160561569 -6088727 - L1Md_F2 LINE L1 -12 6570 5873 1 1809 228 321 43 29 chrX 160561663 160561801 -6088495 - B1F1 SINE Alu -9 140 1 1 1809 541 338 7 0 chrX 160563040 160563179 -6087117 - RSINE1 SINE B4 -21 144 5 1 1810 273 336 117 24 chrX 160564253 160564500 -6085796 - L3b LINE CR1 -40 442 173 1 1810 932 82 104 0 chrX 160565354 160565488 -6084808 - B1_Mus1 SINE Alu 0 148 1 1 1810 922 216 17 0 chrX 160565519 160565695 -6084601 + B3A SINE B2 3 181 -17 1 1810 315 0 0 0 chrX 160565714 160565749 -6084547 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1 1810 924 188 44 34 chrX 160565769 160565973 -6084323 + Lx7 LINE L1 7162 7367 -329 1 1810 6438 109 28 1 chrX 160565982 160567070 -6083226 - L1_Mus4 LINE L1 -714 5922 4819 1 1810 229 379 42 14 chrX 160567155 160567297 -6082999 + MIRb SINE MIR 56 201 -67 1 1810 29 28 0 0 chrX 160567417 160567453 -6082843 + AT_rich Low_complexity Low_complexity 1 36 0 1 1810 435 301 72 45 chrX 160568701 160569077 -6081219 - L1MA5 LINE L1 -5 6295 5910 1 1810 513 167 0 0 chrX 160569107 160569209 -6081087 + CT-rich Low_complexity Low_complexity 1 102 0 1 1810 767 242 42 0 chrX 160569318 160569508 -6080788 - B3A SINE B2 0 198 1 1 1810 24 53 0 0 chrX 160569674 160569712 -6080584 + AT_rich Low_complexity Low_complexity 1 38 0 1 1810 197 359 5 44 chrX 160570182 160570299 -6079997 + MIR SINE MIR 126 240 -28 1 1810 526 277 52 33 chrX 160570517 160570730 -6079566 - L2a LINE L2 -16 3410 3194 1 1810 1180 223 209 19 chrX 160570958 160571275 -6079021 - MTEa LTR MaLR 0 379 3 1 1810 569 241 8 25 chrX 160571316 160571435 -6078861 + 5S rRNA rRNA 1 117 -4 1 1810 641 200 92 0 chrX 160572075 160572205 -6078091 - B1_Mus2 SINE Alu -2 145 4 1 1810 584 333 184 9 chrX 160572304 160572750 -6077546 + L2a LINE L2 2316 2839 -580 1 1810 262 361 151 29 chrX 160574921 160575272 -6075024 + L2a LINE L2 3028 3421 -5 1 1810 204 67 0 0 chrX 160575340 160575370 -6074926 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 1810 378 0 0 0 chrX 160575370 160575412 -6074884 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1810 25 31 0 0 chrX 160576332 160576364 -6073932 + AT_rich Low_complexity Low_complexity 1 32 0 1 1810 459 324 25 76 chrX 160576477 160576591 -6073705 + MIR SINE MIR 1 101 -161 1 1810 3173 53 0 5 chrX 160576591 160576988 -6073308 - L1Md_F2 LINE L1 -13 6569 6175 1 1810 459 324 25 76 chrX 160576988 160577110 -6073186 + MIR SINE MIR 102 225 -37 1 1810 770 171 43 7 chrX 160577681 160577822 -6072474 - B1_Mm SINE Alu 0 147 2 1 1810 898 138 21 0 chrX 160577948 160578093 -6072203 + B1_Mur4 SINE Alu 1 148 -2 1 1810 233 241 42 151 chrX 160578445 160578611 -6071685 - RMER21A LTR ERV1 -211 736 589 1 1810 227 321 40 41 chrX 160579819 160579946 -6070350 + MIRb SINE MIR 7 149 -119 1 1810 497 292 51 51 chrX 160579946 160580141 -6070155 - B3A SINE B2 -2 196 2 1 1810 279 0 0 0 chrX 160580448 160580479 -6069817 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1 1810 1225 63 6 0 chrX 160580479 160580637 -6069659 - B2_Mm1t SINE B2 -33 160 2 1 1810 3622 161 28 92 chrX 160581135 160582020 -6068276 - Lx7 LINE L1 -15 7681 6853 1 1810 1221 210 52 34 chrX 160584639 160584999 -6065297 - MTD LTR MaLR -15 404 1 1 1810 1035 53 30 0 chrX 160585192 160585324 -6064972 + B1_Mus2 SINE Alu 1 136 -11 1 1810 938 254 26 93 chrX 160585602 160585821 -6064475 - B4A SINE B4 0 292 94 1 1810 2651 144 2 16 chrX 160585821 160586267 -6064029 - Lx7 LINE L1 -8 6646 6207 1 1810 938 254 26 93 chrX 160586267 160586359 -6063937 - B4A SINE B4 -199 93 2 1 1810 294 303 141 69 chrX 160586935 160587226 -6063070 - Charlie26a DNA MER1_type 0 325 14 1 1810 522 352 37 23 chrX 160587545 160587763 -6062533 - MER58A DNA MER1_type 0 224 4 1 1810 322 117 25 25 chrX 160588198 160588277 -6062019 + (CAGAGA)n Simple_repeat Simple_repeat 6 84 0 1 1810 328 20 41 0 chrX 160588983 160589032 -6061264 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1810 567 271 163 51 chrX 160589038 160589295 -6061001 - MLT1E1A LTR MaLR -57 623 338 1 1810 608 80 23 0 chrX 160589295 160589383 -6060913 + RLTR11B LTR ERVK 364 453 0 1 1810 424 322 89 37 chrX 160589455 160589645 -6060651 - MLT1E1A LTR MaLR -360 200 1 1 1810 353 315 89 30 chrX 160590049 160590252 -6060044 - MIR SINE MIR -12 250 36 2 1810 685 277 15 39 chrX 160591592 160591795 -6058501 - MER58A DNA MER1_type 0 224 27 2 1810 283 337 127 35 chrX 160591876 160592073 -6058223 - L3 LINE CR1 -903 3586 3372 2 1810 227 261 30 30 chrX 160592074 160592141 -6058155 - MER5B DNA MER1_type -110 68 2 2 1810 245 29 0 29 chrX 160592353 160592388 -6057908 + (TAA)n Simple_repeat Simple_repeat 2 35 0 2 1810 263 315 0 0 chrX 160592442 160592515 -6057781 + CT-rich Low_complexity Low_complexity 1 73 0 2 1810 243 0 0 0 chrX 160592596 160592623 -6057673 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1810 226 370 10 0 chrX 160592755 160592855 -6057441 + L2 LINE L2 2870 2970 -449 2 1810 628 105 19 0 chrX 160592898 160593003 -6057293 + Lx2 LINE L1 6891 6997 0 2 1810 1824 234 13 10 chrX 160593547 160593945 -6056351 + Lx6 LINE L1 7051 7449 -11 2 1810 857 165 22 5 chrX 160593973 160594148 -6056148 + B3 SINE B2 1 185 -10 2 1810 294 143 0 0 chrX 160594194 160594243 -6056053 + (T)n Simple_repeat Simple_repeat 1 49 0 2 1810 1138 82 0 0 chrX 160594243 160594390 -6055906 - B1_Mm SINE Alu 0 147 1 2 1810 886 254 48 45 chrX 160594685 160594974 -6055322 - B4 SINE B4 0 292 3 2 1810 487 312 96 30 chrX 160595143 160595341 -6054955 - B4A SINE B4 0 292 82 2 1810 312 274 31 31 chrX 160595394 160595492 -6054804 - B4A SINE B4 -192 100 3 2 1810 281 259 28 0 chrX 160596956 160597047 -6053249 + MIRc SINE MIR 23 122 -146 2 1810 772 257 113 94 chrX 160597052 160597520 -6052776 + L1MA9 LINE L1 5535 6011 -301 2 1810 250 191 213 0 chrX 160598217 160598311 -6051985 - Lx8 LINE L1 -352 7121 7008 2 1810 390 255 60 7 chrX 160598887 160599037 -6051259 - Lx6 LINE L1 -30 7430 7273 2 1810 728 196 23 0 chrX 160599041 160599174 -6051122 - B1_Mus1 SINE Alu -5 143 8 2 1810 1065 222 18 5 chrX 160599249 160599466 -6050830 - ID_B1 SINE B4 -1 223 4 2 1810 388 156 22 0 chrX 160599728 160599818 -6050478 + CT-rich Low_complexity Low_complexity 1 92 0 2 1810 783 104 0 0 chrX 160599823 160599938 -6050358 + (TTTC)n Simple_repeat Simple_repeat 3 117 0 2 1810 191 283 0 16 chrX 160600691 160600752 -6049544 - L3 LINE CR1 -716 3773 3714 2 1810 321 268 36 126 chrX 160600787 160600898 -6049398 + RSINE1 SINE B4 65 165 0 2 1810 1175 76 0 0 chrX 160601177 160601322 -6048974 - B1_Mm SINE Alu -1 146 2 2 1810 219 170 74 19 chrX 160601480 160601534 -6048762 - B1F SINE Alu 0 149 93 2 1810 213 286 0 0 chrX 160601511 160601560 -6048736 - ID_B1 SINE B4 -97 127 79 2 1810 27 73 0 0 chrX 160602352 160602407 -6047889 + AT_rich Low_complexity Low_complexity 1 55 0 2 1810 21 0 0 0 chrX 160602493 160602514 -6047782 + AT_rich Low_complexity Low_complexity 1 21 0 2 1810 226 147 0 0 chrX 160602814 160602848 -6047448 + tRNA-Gly-GGA tRNA tRNA 7 40 -35 2 1810 183 342 94 26 chrX 160602868 160602985 -6047311 - MIRc SINE MIR -75 193 69 2 1810 2134 254 118 23 chrX 160603085 160604601 -6045695 + L1MA6 LINE L1 4628 6282 -18 2 1810 24 53 0 0 chrX 160605394 160605432 -6044864 + AT_rich Low_complexity Low_complexity 1 38 0 2 1810 257 340 97 19 chrX 160606497 160606655 -6043641 + MIRb SINE MIR 8 179 -89 2 1810 404 324 152 22 chrX 160606674 160606898 -6043398 - LTR16A1 LTR ERVL -29 427 175 2 1810 351 0 0 0 chrX 160606899 160606938 -6043358 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 1810 333 120 0 0 chrX 160606949 160606999 -6043297 + B3 SINE B2 5 54 -162 2 1810 219 297 47 0 chrX 160608578 160608642 -6041654 + MamSINE1 SINE tRNA 38 104 -186 2 1810 404 277 0 0 chrX 160609005 160609099 -6041197 - B1F SINE Alu -55 94 1 2 1810 248 237 183 50 chrX 160609100 160609220 -6041076 - L2a LINE L2 -1 3425 3290 2 1810 477 0 0 0 chrX 160610520 160610573 -6039723 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1810 401 324 170 42 chrX 160610575 160610881 -6039415 + LTR16C LTR ERVL 84 428 -61 2 1810 198 247 26 64 chrX 160611242 160611320 -6038976 - L2c LINE L2 -59 3328 3254 2 1810 1631 222 77 5 chrX 160612319 160612694 -6037602 - MTD LTR MaLR 0 419 18 2 1810 414 0 0 0 chrX 160612694 160612740 -6037556 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1810 290 239 60 11 chrX 160612780 160612871 -6037425 - PB1 SINE Alu -1 148 48 2 1810 1584 183 144 5 chrX 160614126 160614494 -6035802 - MTD LTR MaLR 0 419 1 2 1810 389 195 58 58 chrX 160614952 160615072 -6035224 - HAL1 LINE L1 -716 1791 1672 2 1810 230 326 67 11 chrX 160615287 160615377 -6034919 - HAL1 LINE L1 -2399 108 14 2 1810 402 21 0 0 chrX 160615633 160615680 -6034616 + (TCCC)n Simple_repeat Simple_repeat 2 48 0 2 1810 402 263 0 29 chrX 160615966 160616068 -6034228 + MER5A1 DNA MER1_type 46 144 -22 2 1810 420 301 73 0 chrX 160616092 160616215 -6034081 - MER5B DNA MER1_type -7 171 40 2 1810 549 213 197 0 chrX 160616215 160616337 -6033959 - B1_Mur2 SINE Alu -2 147 2 2 1810 717 259 106 0 chrX 160616359 160616548 -6033748 + B3 SINE B2 1 209 -7 2 1810 237 220 34 0 chrX 160616563 160616622 -6033674 - MER5B DNA MER1_type -117 61 1 2 1810 21 71 0 0 chrX 160616647 160616689 -6033607 + AT_rich Low_complexity Low_complexity 1 42 0 2 1810 707 172 132 0 chrX 160617193 160617344 -6032952 - Lx6 LINE L1 -10 7450 7280 2 1810 332 333 82 51 chrX 160618095 160618253 -6032043 + MER5A DNA MER1_type 19 181 -8 2 1810 423 0 0 0 chrX 160618476 160618523 -6031773 + (TTA)n Simple_repeat Simple_repeat 2 48 0 2 1810 550 204 7 34 chrX 160618525 160618672 -6031624 - Lx4B LINE L1 -16 7042 6900 2 1810 187 279 16 47 chrX 160619099 160619140 -6031156 - L2a LINE L2 -81 3345 3307 2 1810 441 0 0 0 chrX 160619140 160619189 -6031107 + (GA)n Simple_repeat Simple_repeat 1 49 0 2 1810 415 325 95 46 chrX 160619189 160619628 -6030668 - L2a LINE L2 -190 3236 2775 2 1810 312 83 0 0 chrX 160619818 160619866 -6030430 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 1810 772 137 105 0 chrX 160619868 160619992 -6030304 - B1_Mur4 SINE Alu -8 142 6 2 1810 790 210 0 21 chrX 160620120 160620261 -6030035 - B1_Mus2 SINE Alu -7 140 3 2 1810 500 0 17 0 chrX 160620416 160620476 -6029820 + (TTTC)n Simple_repeat Simple_repeat 1 61 0 2 1810 863 309 16 78 chrX 160620820 160621129 -6029167 - B4A SINE B4 0 292 3 2 1810 486 371 81 51 chrX 160621178 160621510 -6028786 - LTR16C LTR ERVL -1 488 147 2 1810 342 143 0 0 chrX 160621824 160621887 -6028409 + (GGGA)n Simple_repeat Simple_repeat 4 66 0 2 1810 954 190 0 0 chrX 160622612 160622754 -6027542 - B1_Mur4 SINE Alu -8 142 1 2 1810 840 237 6 28 chrX 160622945 160623127 -6027169 - B3A SINE B2 -16 182 5 2 1810 518 265 103 110 chrX 160624462 160624754 -6025542 + B4A SINE B4 3 292 0 2 1810 233 130 111 0 chrX 160625507 160625561 -6024735 - MMSAT4 Satellite Satellite -49 119 60 2 1810 258 32 0 0 chrX 160626525 160626556 -6023740 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 1810 563 85 46 13 chrX 160626962 160627061 -6023235 + B1_Mur4 SINE Alu 53 146 -1 2 1810 890 271 95 4 chrX 160627442 160627694 -6022602 + MER58B DNA MER1_type 19 293 -48 2 1810 1991 176 43 17 chrX 160627973 160628473 -6021823 + Lx9 LINE L1 7098 7638 -6 2 1810 1210 219 5 0 chrX 160629160 160629370 -6020926 + B3 SINE B2 1 211 -5 2 1810 736 237 33 28 chrX 160629779 160629961 -6020335 + B3 SINE B2 26 208 -8 2 1810 1188 55 14 7 chrX 160630066 160630212 -6020084 + B1_Mus2 SINE Alu 1 147 0 2 1810 390 345 42 6 chrX 160630543 160630709 -6019587 + MER5A DNA MER1_type 11 182 -7 2 1810 759 199 60 0 chrX 160630721 160630887 -6019409 - ORR1D2 LTR MaLR 0 370 195 2 1810 993 266 0 5 chrX 160630899 160631088 -6019208 - B3 SINE B2 -28 188 1 2 1810 792 199 152 6 chrX 160631088 160631264 -6019032 - ORR1D2 LTR MaLR -160 210 9 2 1810 1228 209 9 0 chrX 160631804 160632019 -6018277 + ID_B1 SINE B4 1 217 -7 2 1810 718 199 59 30 chrX 160632223 160632358 -6017938 - B1_Mur1 SINE Alu -9 140 2 2 1810 303 332 110 58 chrX 160632371 160632735 -6017561 + L1M4 LINE L1 4039 4421 -1725 2 1810 263 324 0 0 chrX 160633882 160633953 -6016343 + GA-rich Low_complexity Low_complexity 3 73 0 2 1810 1253 202 54 45 chrX 160634037 160634369 -6015927 + Lx9 LINE L1 7295 7629 -15 2 1810 880 175 21 7 chrX 160634416 160634560 -6015736 + B1_Mus1 SINE Alu 1 146 -2 2 1810 28 0 0 0 chrX 160634584 160634612 -6015684 + AT_rich Low_complexity Low_complexity 1 28 0 2 1810 198 0 0 0 chrX 160634657 160634679 -6015617 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 1810 1566 63 21 0 chrX 160635374 160635565 -6014731 - B2_Mm2 SINE B2 0 195 1 2 1810 229 324 195 0 chrX 160635917 160636067 -6014229 + MIRb SINE MIR 68 241 -21 2 1810 1290 133 19 5 chrX 160636109 160636321 -6013975 - URR1B DNA MER1_type 0 225 11 2 1810 530 262 31 93 chrX 160636110 160636367 -6013929 + CYRA11_Mm Unknown Y-chromosome 172 412 -205 2 1810 463 316 75 57 chrX 160636549 160636777 -6013519 - MARNA DNA Mariner -105 481 250 2 1810 355 288 0 12 chrX 160637305 160637386 -6012910 - ID4 SINE ID -2 81 2 2 1810 362 319 9 0 chrX 160637398 160637514 -6012782 - PB1D10 SINE Alu 0 117 1 2 1810 338 276 102 0 chrX 160637614 160637712 -6012584 - MER58A DNA MER1_type -71 153 46 2 1810 608 279 39 0 chrX 160639027 160639156 -6011140 - ID_B1 SINE B4 -11 213 80 2 1810 1765 21 0 0 chrX 160639757 160639944 -6010352 + B2_Mm1a SINE B2 1 187 -6 3 1810 695 281 22 22 chrX 160640140 160640322 -6009974 + B3A SINE B2 2 183 -15 3 1810 468 247 85 96 chrX 160640526 160640570 -6009726 - B2_Mm2 SINE B2 -9 186 136 3 1810 342 0 0 0 chrX 160640570 160640608 -6009688 + (TC)n Simple_repeat Simple_repeat 2 39 0 3 1810 414 0 0 0 chrX 160640608 160640653 -6009643 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1810 761 208 46 4 chrX 160640653 160640795 -6009501 - B3A SINE B2 -56 142 1 3 1810 775 219 121 10 chrX 160640795 160640999 -6009297 - B4A SINE B4 -62 230 4 3 1810 4906 47 20 23 chrX 160641352 160641957 -6008339 + L1_Mus2 LINE L1 5964 6566 0 3 1810 3773 35 7 5 chrX 160642051 160642484 -6007812 + L1Md_F3 LINE L1 6150 6583 -1 3 1810 25 65 0 0 chrX 160642485 160642531 -6007765 + AT_rich Low_complexity Low_complexity 1 46 0 3 1810 880 77 8 8 chrX 160643372 160643503 -6006793 + (GGGAGA)n Simple_repeat Simple_repeat 6 136 0 3 1810 647 278 22 11 chrX 160643863 160644041 -6006255 - B4 SINE B4 -2 290 111 3 1810 542 287 15 0 chrX 160644300 160644436 -6005860 + B1F SINE Alu 8 145 -4 3 1810 309 226 22 77 chrX 160644665 160644756 -6005540 + MTC LTR MaLR 319 404 -17 3 1810 316 233 13 27 chrX 160644789 160644864 -6005432 - B4 SINE B4 -2 290 217 3 1810 186 71 0 0 chrX 160644866 160644894 -6005402 + (TTTTTG)n Simple_repeat Simple_repeat 4 31 0 3 1810 361 333 9 9 chrX 160644900 160645009 -6005287 - B4A SINE B4 -56 236 128 3 1810 562 193 23 6 chrX 160645015 160645187 -6005109 + CT-rich Low_complexity Low_complexity 2 176 0 3 1810 394 258 97 0 chrX 160645187 160645311 -6004985 - B4 SINE B4 -148 144 9 3 1810 367 266 17 17 chrX 160645671 160645786 -6004510 + MER115 DNA Tip100 498 612 -81 3 1810 8020 52 1 6 chrX 160647601 160648873 -6001423 + L1_Mus2 LINE L1 5301 6566 0 3 1810 1001 283 64 26 chrX 160649389 160649622 -6000674 + B4A SINE B4 14 262 -30 3 1810 1886 166 40 91 chrX 160649622 160650027 -6000269 - ORR1C2 LTR MaLR 0 384 1 3 1810 1001 283 64 26 chrX 160650027 160650058 -6000238 + B4A SINE B4 263 288 -4 3 1810 1325 21 7 0 chrX 160650272 160650417 -5999879 - B1_Mus2 SINE Alu 0 147 2 3 1810 23 33 0 0 chrX 160650512 160650542 -5999754 + AT_rich Low_complexity Low_complexity 1 30 0 3 1810 910 228 5 45 chrX 160650921 160651123 -5999173 + B3A SINE B2 5 198 0 3 1810 234 0 0 0 chrX 160651933 160651959 -5998337 + (TATAA)n Simple_repeat Simple_repeat 2 27 0 3 1810 1011 146 14 0 chrX 160652362 160652506 -5997790 + B1_Mus1 SINE Alu 2 147 -1 3 1810 2674 114 85 18 chrX 160652526 160652971 -5997325 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1810 2377 209 66 32 chrX 160653272 160653666 -5996630 + Lx9 LINE L1 7059 7448 -196 3 1810 2478 167 23 2 chrX 160653666 160654062 -5996234 + MTB_Mm LTR MaLR 1 404 -3 3 1810 2377 209 66 32 chrX 160654062 160654227 -5996069 + Lx9 LINE L1 7449 7637 -7 3 1810 295 290 134 76 chrX 160654801 160654958 -5995338 + MIRc SINE MIR 64 229 -39 3 1810 300 198 309 0 chrX 160654967 160655048 -5995248 + PB1D9 SINE Alu 14 119 -1 3 1810 199 326 11 11 chrX 160655168 160655258 -5995038 - MIR SINE MIR 0 262 173 3 1810 202 254 47 16 chrX 160655648 160655712 -5994584 - MIR SINE MIR -106 156 91 3 1810 303 28 0 0 chrX 160655769 160655805 -5994491 + (CAGG)n Simple_repeat Simple_repeat 4 39 0 3 1810 32 0 0 0 chrX 160656399 160656431 -5993865 + AT_rich Low_complexity Low_complexity 1 32 0 3 1810 279 284 0 24 chrX 160656549 160656632 -5993664 - ID2 SINE ID 0 83 3 3 1810 216 83 20 40 chrX 160656711 160656761 -5993535 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1810 1792 171 94 9 chrX 160657203 160657545 -5992751 + ORR1D1 LTR MaLR 1 371 -3 3 1810 476 283 333 24 chrX 160657596 160657929 -5992367 + MLT1H2 LTR MaLR 30 465 -24 3 1810 183 177 48 0 chrX 160658197 160658259 -5992037 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 1810 307 307 61 28 chrX 160660296 160660477 -5989819 - L1MB8 LINE L1 -11 6173 5987 3 1810 633 259 168 14 chrX 160660536 160661170 -5989126 - L1MB8 LINE L1 -313 5865 5128 3 1810 850 67 0 0 chrX 160661328 160661447 -5988849 + L1Md_F2 LINE L1 6462 6580 -2 3 1810 446 240 188 0 chrX 160661734 160661787 -5988509 - L1MB3 LINE L1 -202 5981 5927 3 1810 465 19 0 0 chrX 160661787 160661841 -5988455 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 1810 446 240 188 0 chrX 160661841 160661941 -5988355 - L1MB3 LINE L1 -257 5926 5800 3 1810 413 171 11 0 chrX 160661947 160662035 -5988261 + A-rich Low_complexity Low_complexity 5 93 0 3 1810 3261 56 32 15 chrX 160662051 160662451 -5987845 + MTB_Mm LTR MaLR 1 407 0 3 1810 891 261 142 17 chrX 160662459 160662880 -5987416 - L1MB3 LINE L1 -389 5794 5321 3 1810 476 253 58 38 chrX 160662900 160663118 -5987178 - L1MB3 LINE L1 -1028 5118 4898 3 1810 268 189 105 22 chrX 160663140 160663238 -5987058 - L1MB3 LINE L1 -1311 4835 4731 3 1810 220 351 18 82 chrX 160663577 160663744 -5986552 + MIRc SINE MIR 4 157 -51 3 1810 1152 230 176 9 chrX 160663750 160664097 -5986199 - MTD LTR MaLR -14 405 1 3 1810 1250 56 0 0 chrX 160664174 160664318 -5985978 + B1_Mm SINE Alu 1 144 -3 3 1810 751 147 79 22 chrX 160664493 160664632 -5985664 - B1_Mus1 SINE Alu 0 148 2 3 1810 1305 251 131 35 chrX 160664636 160665032 -5985264 + RCHARR1 DNA MER1_type 1 434 -540 3 1810 2303 199 32 47 chrX 160665033 160665603 -5984693 + RLTR31_Mm LTR ERVK 1 561 0 3 1810 521 248 7 7 chrX 160665603 160665750 -5984546 + RCHARR1 DNA MER1_type 430 576 -398 3 1810 275 0 29 0 chrX 160665754 160665789 -5984507 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 3 1810 689 63 3 40 chrX 160665789 160665880 -5984416 - B1_Mus2 SINE Alu -13 134 43 3 1810 277 227 91 26 chrX 160665819 160665896 -5984400 - RLTR25B LTR ERVK -519 509 428 3 1810 1014 227 108 57 chrX 160665899 160665999 -5984297 + RCHARR1 DNA MER1_type 568 673 -301 3 1810 1268 204 19 0 chrX 160665999 160666205 -5984091 + B3 SINE B2 2 211 -5 3 1810 1014 227 108 57 chrX 160666205 160666491 -5983805 + RCHARR1 DNA MER1_type 674 974 0 3 1810 805 296 9 9 chrX 160666621 160666846 -5983450 + MTD LTR MaLR 46 270 -149 3 1810 636 185 58 15 chrX 160666897 160667034 -5983262 + MTD LTR MaLR 263 405 -14 3 1810 369 0 0 0 chrX 160667111 160667152 -5983144 + (A)n Simple_repeat Simple_repeat 1 41 0 3 1810 2405 139 8 6 chrX 160667318 160667672 -5982624 + Lx4A LINE L1 6693 7047 -11 3 1810 234 0 0 0 chrX 160667672 160667698 -5982598 + (TAA)n Simple_repeat Simple_repeat 1 26 0 3 1810 1204 234 64 26 chrX 160667901 160668165 -5982131 - MTD LTR MaLR -140 279 6 3 1810 1247 196 14 5 chrX 160669556 160669766 -5980530 + B3 SINE B2 1 212 -4 3 1810 21 36 0 0 chrX 160669766 160669794 -5980502 + AT_rich Low_complexity Low_complexity 1 28 0 3 1810 697 217 55 50 chrX 160670273 160670472 -5979824 + RMER5 LTR ERV1 33 232 -302 3 1810 562 246 162 80 chrX 160670479 160670867 -5979429 - RMER10A LTR ERVL -18 424 5 3 1810 1072 218 47 56 chrX 160670863 160671184 -5979112 + RMER5 LTR ERV1 216 533 -1 3 1810 252 143 0 0 chrX 160671791 160671833 -5978463 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 1810 990 301 138 44 chrX 160673383 160673841 -5976455 + MLT1D LTR MaLR 5 505 0 3 1810 330 107 0 0 chrX 160673986 160674042 -5976254 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1810 306 0 0 0 chrX 160674524 160674558 -5975738 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1810 229 317 15 82 chrX 160674649 160674783 -5975513 - MLT1C LTR MaLR -288 179 55 3 1810 620 92 0 47 chrX 160675542 160675690 -5974606 + (TCTCCC)n Simple_repeat Simple_repeat 1 141 0 3 1810 346 184 211 0 chrX 160675692 160675768 -5974528 - B1_Mus2 SINE Alu -55 92 1 3 1810 239 274 196 21 chrX 160675768 160675801 -5974495 - B4 SINE B4 -189 103 54 3 1810 790 235 48 32 chrX 160676772 160677060 -5973236 + L1MA4A LINE L1 5675 5966 -190 3 1810 342 115 0 0 chrX 160677780 160677832 -5972464 + (TCTCCC)n Simple_repeat Simple_repeat 1 52 0 3 1810 369 0 0 0 chrX 160677835 160677876 -5972420 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1810 468 281 91 0 chrX 160677877 160677998 -5972298 - B1F1 SINE Alu -14 135 4 3 1810 795 229 81 12 chrX 160677998 160678170 -5972126 - B3 SINE B2 -32 184 1 3 1810 1436 98 0 15 chrX 160678173 160678369 -5971927 - B2_Mm2 SINE B2 -1 194 2 3 1810 375 220 41 33 chrX 160678506 160678628 -5971668 - Lx7 LINE L1 0 7696 7574 3 1810 11087 48 1 1 chrX 160679261 160681291 -5969005 - L1Md_F2 LINE L1 -2 6580 4550 3 1810 428 282 124 94 chrX 160681437 160681906 -5968390 - L1MC4 LINE L1 0 8042 7560 3 1810 261 299 36 73 chrX 160681921 160682058 -5968238 + YREP_Mm Unknown Unknown 164 295 -1517 3 1810 504 273 31 0 chrX 160681946 160682074 -5968222 - ID_B1 SINE B4 -6 218 87 3 1810 256 320 26 0 chrX 160682118 160682196 -5968100 + ID4 SINE ID 1 80 -3 3 1810 878 0 10 0 chrX 160682991 160683093 -5967203 + (GGAGA)n Simple_repeat Simple_repeat 5 107 0 3 1810 271 258 57 47 chrX 160683677 160683783 -5966513 + MIR SINE MIR 137 243 -19 3 1810 229 281 36 24 chrX 160684446 160684530 -5965766 + B4A SINE B4 203 287 -5 3 1810 816 173 41 41 chrX 160684774 160684919 -5965377 - B1_Mur4 SINE Alu -1 149 5 3 1810 615 243 22 14 chrX 160685175 160685313 -5964983 + RSINE1 SINE B4 3 141 -24 3 1810 351 0 0 0 chrX 160685321 160685360 -5964936 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1810 415 328 74 74 chrX 160686505 160686722 -5963574 - MER20 DNA MER1_type 0 219 3 3 1810 489 177 0 0 chrX 160687830 160687885 -5962411 + A-rich Low_complexity Low_complexity 1 55 0 3 1810 1178 88 0 7 chrX 160687885 160688033 -5962263 + B1_Mus2 SINE Alu 1 147 0 3 1810 489 177 0 0 chrX 160688033 160688073 -5962223 + A-rich Low_complexity Low_complexity 56 95 0 3 1810 301 286 87 0 chrX 160689850 160689976 -5960320 - L1MA8 LINE L1 -353 5938 5802 3 1810 230 270 30 10 chrX 160690408 160690509 -5959787 - MMAR1 DNA Mariner -1115 171 69 3 1810 387 98 0 0 chrX 160691163 160691224 -5959072 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 1810 572 200 8 55 chrX 160691247 160691374 -5958922 - B3A SINE B2 -76 122 2 3 1810 432 0 0 0 chrX 160691437 160691485 -5958811 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1810 465 312 48 5 chrX 160691795 160691982 -5958314 + RLTR42-int LTR ERVK 1153 1347 -4175 3 1810 1027 147 0 0 chrX 160692001 160692137 -5958159 + B1_Mur4 SINE Alu 2 137 -13 3 1810 930 171 14 7 chrX 160692476 160692623 -5957673 + B1_Mur4 SINE Alu 3 150 0 4 1810 239 329 52 13 chrX 160692721 160692798 -5957498 - MIR SINE MIR -168 94 15 4 1810 927 186 0 0 chrX 160693043 160693183 -5957113 + B1_Mur1 SINE Alu 1 140 -9 4 1810 387 119 0 0 chrX 160693192 160693259 -5957037 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 1810 205 245 0 0 chrX 160693259 160693302 -5956994 + GA-rich Low_complexity Low_complexity 10 52 0 4 1811 389 265 113 8 chrX 160694590 160694723 -5955573 + MIRb SINE MIR 56 202 -66 4 1811 332 253 0 46 chrX 160695838 160695925 -5954371 + Arthur1 DNA Tip100 3858 3940 -7 4 1811 912 229 88 0 chrX 160697049 160697241 -5953055 - B3 SINE B2 -7 209 1 4 1811 260 154 19 0 chrX 160698123 160698175 -5952121 + GA-rich Low_complexity Low_complexity 2 54 0 4 1811 312 200 135 62 chrX 160698186 160698282 -5952014 + PB1D9 SINE Alu 10 112 -8 4 1811 2109 254 91 21 chrX 160698427 160699042 -5951254 - Lx8 LINE L1 -363 7110 6453 4 1811 793 312 62 23 chrX 160699071 160699425 -5950871 + L2 LINE L2 2352 2719 -700 4 1811 272 200 36 0 chrX 160699426 160699481 -5950815 + ID_B1 SINE B4 160 216 -8 4 1811 255 213 0 21 chrX 160699502 160699550 -5950746 + ID4_ SINE ID 14 60 -23 4 1811 3779 178 98 48 chrX 160699948 160700808 -5949488 - RMER13B LTR ERVK -5 903 1 4 1811 339 357 46 40 chrX 160701279 160701454 -5948842 + MER58A DNA MER1_type 43 218 -6 4 1811 335 236 164 58 chrX 160701635 160701824 -5948472 - L1ME2z LINE L1 -9 6435 6227 4 1811 726 262 89 6 chrX 160702629 160702798 -5947498 + ID_B1 SINE B4 3 185 -39 4 1811 2724 122 44 29 chrX 160702805 160703286 -5947010 - RLTR28 LTR ERVL 0 524 37 4 1811 333 0 0 0 chrX 160703291 160703328 -5946968 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1811 252 0 0 0 chrX 160703328 160703355 -5946941 + (GA)n Simple_repeat Simple_repeat 2 29 0 4 1811 4626 68 0 0 chrX 160703443 160703990 -5946306 - L1Md_T LINE L1 0 6582 6036 4 1811 328 363 102 42 chrX 160704835 160705120 -5945176 - MLT1G3 LTR MaLR -291 304 3 4 1811 409 220 22 11 chrX 160706016 160706108 -5944188 - U6 snRNA snRNA -14 93 1 4 1811 966 261 5 18 chrX 160706204 160706426 -5943870 + ID_B1 SINE B4 1 219 -5 4 1811 500 269 38 100 chrX 160706429 160706669 -5943627 + MER58B DNA MER1_type 97 321 -20 4 1811 211 258 168 77 chrX 160707023 160707166 -5943130 - MIRb SINE MIR -15 253 98 4 1811 213 39 0 0 chrX 160707645 160707671 -5942625 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 1811 321 333 97 21 chrX 160708117 160708261 -5942035 - MIR SINE MIR -90 172 18 4 1811 189 0 0 0 chrX 160708366 160708387 -5941909 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 1811 1255 243 60 44 chrX 160708590 160708956 -5941340 + Lx8 LINE L1 7100 7471 -2 4 1811 477 164 0 48 chrX 160710587 160710670 -5939626 - ID4_ SINE ID -3 80 2 4 1811 558 0 0 0 chrX 160710690 160710752 -5939544 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 4 1811 453 177 102 20 chrX 160710752 160710842 -5939454 - PB1 SINE Alu -7 120 22 4 1811 267 203 0 0 chrX 160710949 160711013 -5939283 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 1811 773 131 84 35 chrX 160711019 160711161 -5939135 - B1_Mur3 SINE Alu 0 149 1 4 1811 763 232 239 0 chrX 160711163 160711448 -5938848 - L1MA8 LINE L1 -54 6237 5885 4 1811 855 142 209 21 chrX 160711885 160712072 -5938224 - URR1A DNA MER1_type 0 226 5 4 1811 251 266 38 12 chrX 160712105 160712185 -5938111 - L1M5 LINE L1 -221 5903 5822 4 1811 203 171 0 0 chrX 160712460 160712495 -5937801 + CT-rich Low_complexity Low_complexity 2 36 0 4 1811 23 68 0 0 chrX 160713133 160713177 -5937119 + AT_rich Low_complexity Low_complexity 1 44 0 4 1811 366 161 0 36 chrX 160714108 160714223 -5936073 + L1Md_A LINE L1 6502 6582 0 4 1811 252 143 0 0 chrX 160714232 160714274 -5936022 + (A)n Simple_repeat Simple_repeat 1 42 0 4 1811 1283 292 14 17 chrX 160714610 160714972 -5935324 + MLT1A0 LTR MaLR 5 365 0 4 1811 1121 304 151 49 chrX 160714987 160715603 -5934693 - MLT-int LTR MaLR -1033 702 24 4 1811 321 221 106 40 chrX 160715757 160715908 -5934388 + L1M5 LINE L1 3857 4017 -2129 4 1811 234 81 0 0 chrX 160715998 160716035 -5934261 + (TTTTTG)n Simple_repeat Simple_repeat 4 40 0 4 1811 1208 68 7 0 chrX 160716035 160716182 -5934114 - B1_Mus1 SINE Alu 0 148 1 4 1811 225 65 0 0 chrX 160717006 160717037 -5933259 + (T)n Simple_repeat Simple_repeat 1 31 0 4 1811 47 0 0 0 chrX 160717396 160717443 -5932853 + AT_rich Low_complexity Low_complexity 1 47 0 4 1811 205 275 48 48 chrX 160717582 160717666 -5932630 + L2c LINE L2 3057 3140 -247 4 1811 30 27 0 0 chrX 160718317 160718354 -5931942 + AT_rich Low_complexity Low_complexity 1 37 0 4 1811 1343 293 53 34 chrX 160718841 160719368 -5930928 + RMER1B Other Other 1 537 -529 4 1811 216 154 0 0 chrX 160719861 160719913 -5930383 + (TTA)n Simple_repeat Simple_repeat 2 53 0 4 1811 513 312 78 16 chrX 160720428 160720620 -5929676 - MER82 DNA MER2_type -132 521 318 4 1811 411 221 35 0 chrX 160720617 160720703 -5929593 + B3 SINE B2 127 215 -1 4 1811 617 208 8 0 chrX 160721181 160721306 -5928990 + RMER1B Other Other 795 920 -146 4 1811 226 329 25 12 chrX 160721439 160721519 -5928777 + MER81 DNA AcHobo 29 109 -5 4 1811 460 214 0 0 chrX 160721541 160721625 -5928671 + B3A SINE B2 1 84 -114 4 1811 258 128 0 0 chrX 160721633 160721672 -5928624 - MLT2C2 LTR ERVL -2 557 519 4 1811 486 0 0 0 chrX 160721673 160721727 -5928569 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 4 1811 528 212 28 77 chrX 160722200 160722343 -5927953 + ID_B1 SINE B4 82 217 -7 4 1811 2024 101 12 51 chrX 160722848 160723183 -5927113 + RLTRETN_Mm LTR ERVK 1 322 0 4 1811 372 43 0 0 chrX 160723492 160723538 -5926758 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1811 417 39 0 0 chrX 160724167 160724218 -5926078 + (GAAAA)n Simple_repeat Simple_repeat 5 55 0 4 1811 341 289 123 15 chrX 160725121 160725251 -5925045 + MER20 DNA MER1_type 1 144 -75 4 1811 213 230 129 100 chrX 160725351 160725491 -5924805 - L3 LINE CR1 -3316 1173 1030 4 1811 1316 146 9 48 chrX 160725994 160726224 -5924072 - URR1A DNA MER1_type 0 226 6 4 1811 207 398 21 0 chrX 160727028 160727121 -5923175 + MIRm SINE MIR 5 99 -177 4 1811 663 249 83 65 chrX 160727290 160727792 -5922504 + L1M2 LINE L1 5052 5527 -353 4 1811 254 317 243 9 chrX 160727828 160728038 -5922258 - L2a LINE L2 -91 3335 3077 4 1811 423 0 0 0 chrX 160730640 160730687 -5919609 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1811 578 237 14 7 chrX 160730762 160730902 -5919394 + B3 SINE B2 66 206 -10 4 1811 635 280 21 5 chrX 160731778 160731972 -5918324 + MER3 DNA MER1_type 7 203 -6 4 1811 1105 256 10 31 chrX 160732631 160732925 -5917371 - B4 SINE B4 -4 288 1 4 1811 1261 293 93 35 chrX 160732934 160733683 -5916613 - L1MA9 LINE L1 -206 6106 5314 4 1811 404 155 82 12 chrX 160734048 160734133 -5916163 - MTE2b LTR MaLR -1 378 288 4 1811 1054 252 42 38 chrX 160734967 160735256 -5915040 - MTE2b LTR MaLR -86 293 4 4 1811 405 0 0 0 chrX 160735354 160735399 -5914897 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1811 671 293 0 12 chrX 160735455 160735621 -5914675 - RSINE1 SINE B4 0 165 2 4 1811 837 199 14 0 chrX 160735954 160736100 -5914196 + B1_Mur2 SINE Alu 2 149 0 4 1811 340 305 102 11 chrX 160737148 160737324 -5912972 + LTR16E1 LTR ERVL 346 537 -1 4 1811 725 213 124 22 chrX 160738845 160739023 -5911273 + B3A SINE B2 2 197 -1 4 1811 526 318 67 56 chrX 160739230 160739500 -5910796 - LTR16A1 LTR ERVL -6 450 178 4 1811 3634 101 24 17 chrX 160739655 160740241 -5910055 - L1_Mur2 LINE L1 -569 5308 4719 4 1811 635 295 55 5 chrX 160740241 160740442 -5909854 - MTD LTR MaLR -191 228 18 4 1811 421 277 34 41 chrX 160741117 160741264 -5909032 + B1F1 SINE Alu 4 149 0 4 1811 3070 66 10 0 chrX 160741295 160741691 -5908605 + MTB LTR MaLR 1 400 0 4 1811 845 305 94 70 chrX 160741965 160742434 -5907862 - RMER13A LTR ERVK -367 493 14 4 1811 333 0 0 0 chrX 160742752 160742789 -5907507 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 4 1811 566 172 26 1 chrX 160742802 160742921 -5907375 - B2_Mm2 SINE B2 -57 159 28 4 1811 837 266 32 5 chrX 160743308 160743476 -5906820 + B3A SINE B2 1 174 -24 4 1811 204 97 0 0 chrX 160743476 160743507 -5906789 + (CATG)n Simple_repeat Simple_repeat 1 31 0 4 1811 837 266 32 5 chrX 160743507 160743527 -5906769 + B3A SINE B2 175 193 -5 4 1811 393 273 29 43 chrX 160743671 160743809 -5906487 - MER5A1 DNA MER1_type -13 153 18 4 1811 471 252 96 13 chrX 160744421 160744578 -5905718 + MIR SINE MIR 32 201 -61 4 1811 180 0 0 0 chrX 160745376 160745396 -5904900 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 1811 34 0 0 0 chrX 160745683 160745717 -5904579 + AT_rich Low_complexity Low_complexity 1 34 0 4 1811 797 223 0 79 chrX 160745935 160746149 -5904147 - B3A SINE B2 0 198 2 4 1811 231 306 16 0 chrX 160746166 160746228 -5904068 - PB1D10 SINE Alu -21 96 34 4 1811 321 68 0 0 chrX 160746263 160746307 -5903989 + (CAAT)n Simple_repeat Simple_repeat 4 47 0 4 1811 236 318 60 52 chrX 160746913 160747029 -5903267 - L2c LINE L2 -18 3369 3253 4 1811 928 288 10 86 chrX 160747206 160747510 -5902786 + B4 SINE B4 2 282 -10 4 1811 299 304 103 50 chrX 160748197 160748439 -5901857 - RLTR42-int LTR ERVK -4122 1400 1146 5 1811 411 174 0 0 chrX 160750071 160750140 -5900156 + B4 SINE B4 1 69 -223 5 1811 254 286 25 36 chrX 160750140 160750170 -5900126 + ID2 SINE ID 1 98 -54 5 1811 252 217 0 0 chrX 160750208 160750254 -5900042 + B3A SINE B2 74 119 -79 5 1811 612 237 190 13 chrX 160750304 160750462 -5899834 + B4A SINE B4 107 292 0 5 1811 3510 44 25 2 chrX 160750561 160750996 -5899300 + L1Md_F2 LINE L1 6126 6570 -12 5 1811 264 77 0 0 chrX 160751671 160751710 -5898586 + (TTCTG)n Simple_repeat Simple_repeat 2 40 0 5 1811 180 111 0 0 chrX 160751711 160751738 -5898558 + (TCCCC)n Simple_repeat Simple_repeat 3 29 0 5 1811 468 315 85 51 chrX 160751742 160751919 -5898377 - ID_B1 SINE B4 -37 187 5 5 1811 206 167 48 0 chrX 160752583 160752625 -5897671 + GA-rich Low_complexity Low_complexity 5 48 0 5 1811 286 188 287 0 chrX 160753183 160753284 -5897012 + Lx7 LINE L1 7171 7300 -396 5 1811 256 173 0 39 chrX 160753410 160753488 -5896808 + Lx7 LINE L1 7605 7679 -17 5 1811 6864 54 11 20 chrX 160753494 160754390 -5895906 + L1Md_F2 LINE L1 5695 6582 0 5 1811 8157 70 17 1 chrX 160754556 160755649 -5894647 - Lx3_Mus LINE L1 0 7009 5899 5 1811 302 212 15 15 chrX 160755776 160755843 -5894453 - MER33 DNA MER1_type -249 75 9 5 1811 419 88 12 59 chrX 160755966 160756051 -5894245 - L1Md_F2 LINE L1 0 6582 6502 5 1811 1861 230 42 0 chrX 160756059 160756442 -5893854 - MTD LTR MaLR -14 405 7 5 1811 234 213 0 0 chrX 160756453 160756500 -5893796 - LTR16D LTR ERVL -73 578 532 5 1811 331 382 83 39 chrX 160756524 160756753 -5893543 - LTR16D LTR ERVL -257 394 156 5 1811 685 294 97 109 chrX 160757426 160757965 -5892331 - LTR55 LTR ERV -16 532 1 5 1811 282 257 29 0 chrX 160759763 160759833 -5890463 + ID4_ SINE ID 4 75 -8 5 1811 995 229 9 5 chrX 160759964 160760179 -5890117 + B3 SINE B2 1 216 0 5 1811 1206 43 0 0 chrX 160760317 160760458 -5889838 - B1_Mus2 SINE Alu -5 142 2 5 1811 234 0 0 0 chrX 160761159 160761185 -5889111 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 1811 225 0 0 0 chrX 160762587 160762612 -5887684 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1811 3857 168 113 70 chrX 160762614 160763463 -5886833 + RMER19B LTR ERVK 1 886 -16 5 1811 12537 34 8 0 chrX 160763463 160763765 -5886531 + L1_Mm LINE L1 3891 4196 -1687 5 1811 459 0 0 0 chrX 160763765 160763816 -5886480 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1811 12537 34 8 0 chrX 160763816 160765117 -5885179 + L1_Mm LINE L1 4197 5504 -379 5 1811 3679 22 4 0 chrX 160765115 160765571 -5884725 - L1_Mm LINE L1 -1457 4426 3969 5 1811 195 338 24 24 chrX 160766084 160766166 -5884130 - L2a LINE L2 -16 3410 3329 5 1811 355 322 109 49 chrX 160766275 160766928 -5883368 - L1ME3A LINE L1 -12 6161 5470 5 1811 490 326 45 58 chrX 160767529 160767833 -5882463 + B4A SINE B4 10 291 -1 5 1811 274 228 60 60 chrX 160769446 160769530 -5880766 + MLT1D LTR MaLR 12 95 -410 5 1811 529 256 103 0 chrX 160769535 160769652 -5880644 + ID_B1 SINE B4 88 216 -8 5 1811 476 289 8 47 chrX 160769683 160769810 -5880486 + ID_B1 SINE B4 94 215 -9 5 1811 784 208 131 5 chrX 160770123 160770321 -5879975 - URR1B DNA MER1_type -1 224 2 5 1811 620 194 7 48 chrX 160770747 160770893 -5879403 + RMER10B LTR ERVL 203 342 -56 5 1811 234 0 0 0 chrX 160770894 160770920 -5879376 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 5 1811 25676 63 6 7 chrX 160770926 160775169 -5875127 - L1Md_F2 LINE L1 -5 6577 2339 5 1811 571 184 0 0 chrX 160775404 160775502 -5874794 - B1_Mur2 SINE Alu -7 142 45 5 1811 453 272 63 20 chrX 160775510 160775683 -5874613 - MIR SINE MIR -62 200 20 5 1811 360 0 0 0 chrX 160776230 160776270 -5874026 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1811 312 247 55 0 chrX 160776294 160776425 -5873871 + L1MD3 LINE L1 7886 8040 -2 5 1811 890 96 7 0 chrX 160777199 160777334 -5872962 + (GGAA)n Simple_repeat Simple_repeat 4 139 0 5 1811 939 141 0 20 chrX 160777358 160777510 -5872786 + B1_Mur4 SINE Alu 1 149 -1 5 1811 818 256 30 20 chrX 160778807 160779010 -5871286 + B4 SINE B4 83 287 -5 5 1811 464 202 0 114 chrX 160779295 160779418 -5870878 + MT2B LTR ERVL 156 264 -337 5 1811 1103 57 7 0 chrX 160779312 160779453 -5870843 + B1_Mus1 SINE Alu 7 148 0 5 1811 237 325 13 0 chrX 160779810 160779887 -5870409 + B3A SINE B2 3 80 -118 5 1811 351 0 0 0 chrX 160779932 160779971 -5870325 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1811 357 82 0 0 chrX 160780270 160780319 -5869977 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 1811 252 0 0 0 chrX 160780330 160780358 -5869938 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1811 189 328 82 30 chrX 160780854 160780940 -5869356 - MIRc SINE MIR -120 148 56 5 1811 1132 292 22 24 chrX 160780940 160781309 -5868987 + ORR1D2 LTR MaLR 1 368 -2 5 1811 189 328 82 30 chrX 160781309 160781357 -5868939 - MIRc SINE MIR -213 55 7 5 1811 273 373 93 6 chrX 160781552 160781714 -5868582 + LTR16C LTR ERVL 4 179 -310 5 1811 1646 192 82 15 chrX 160781823 160782166 -5868130 + ORR1D1 LTR MaLR 1 366 -8 5 1811 344 225 191 54 chrX 160783068 160783263 -5867033 - MER58B DNA MER1_type -1 340 141 5 1811 1221 62 7 0 chrX 160784110 160784255 -5866041 - B1_Mus1 SINE Alu -1 147 2 5 1811 491 331 43 18 chrX 160784490 160784653 -5865643 - B4A SINE B4 -1 291 125 5 1811 466 253 164 13 chrX 160784730 160784882 -5865414 + B4A SINE B4 60 234 -58 5 1811 996 267 17 53 chrX 160785058 160785359 -5864937 + B4A SINE B4 3 292 0 5 1811 244 292 8 89 chrX 160786664 160786788 -5863508 + MER63B DNA AcHobo 308 421 -15 5 1811 896 276 58 61 chrX 160786858 160787236 -5863060 - Charlie4a DNA MER1_type -131 377 1 5 1811 484 124 16 16 chrX 160787445 160787568 -5862728 + (TCTG)n Simple_repeat Simple_repeat 2 124 0 5 1811 719 251 114 81 chrX 160787593 160787866 -5862430 - B4A SINE B4 -10 282 1 5 1811 352 196 20 89 chrX 160788255 160788356 -5861940 - HAL1-3A_ME LINE L1 -790 2068 1975 5 1811 248 140 0 39 chrX 160788391 160788443 -5861853 + GA-rich Low_complexity Low_complexity 2 51 0 5 1811 38839 30 0 0 chrX 160789142 160795777 -5854519 - L1Md_T LINE L1 0 6585 1 5 1811 315 137 59 0 chrX 160796194 160796245 -5854051 - HAL1-3A_ME LINE L1 -824 2034 1981 5 1811 756 291 27 88 chrX 160796291 160796452 -5853844 - B4A SINE B4 -16 276 128 5 1811 411 21 0 0 chrX 160796452 160796500 -5853796 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1811 756 291 27 88 chrX 160796500 160796632 -5853664 - B4A SINE B4 -165 127 1 5 1811 1288 284 56 30 chrX 160796659 160797121 -5853175 - Lx8 LINE L1 -9 7464 6991 5 1811 34 24 0 0 chrX 160798394 160798435 -5851861 + AT_rich Low_complexity Low_complexity 1 41 0 5 1811 269 269 0 13 chrX 160798496 160798575 -5851721 + MIRm SINE MIR 66 143 -133 5 1811 680 296 0 24 chrX 160798595 160798761 -5851535 - RSINE1 SINE B4 0 165 4 5 1811 239 304 39 19 chrX 160799582 160799607 -5850689 - BC1_Mm scRNA scRNA -45 107 2 5 1811 314 253 89 0 chrX 160799607 160799686 -5850610 - B4A SINE B4 -205 87 2 5 1811 283 276 112 22 chrX 160800713 160800802 -5849494 - RSINE1 SINE B4 -21 144 48 5 1811 5141 80 16 0 chrX 160800880 160801567 -5848729 + L1VL2 LINE L1 341 1038 -5297 5 1811 541 299 60 0 chrX 160801941 160802075 -5848221 + RSINE1 SINE B4 11 152 -13 5 1811 183 156 0 0 chrX 160802703 160802735 -5847561 + A-rich Low_complexity Low_complexity 1 32 0 5 1811 423 337 61 31 chrX 160802892 160803088 -5847208 + MTD LTR MaLR 1 202 -217 5 1811 839 254 19 38 chrX 160803098 160803307 -5846989 + B3 SINE B2 6 210 -6 5 1811 435 269 81 15 chrX 160803331 160803467 -5846829 + MTD LTR MaLR 196 340 -79 5 1811 186 230 24 119 chrX 160803766 160803850 -5846446 + L3 LINE CR1 2263 2338 -2151 5 1811 1228 51 0 0 chrX 160804272 160804409 -5845887 - B1_Mus2 SINE Alu -10 137 1 5 1811 239 321 118 15 chrX 160804409 160804545 -5845751 - MLT1H2 LTR MaLR -3 486 337 5 1811 434 288 143 30 chrX 160804736 160804904 -5845392 - LTR33C LTR ERVL -314 315 129 5 1811 616 223 30 8 chrX 160805149 160805280 -5845016 + B3 SINE B2 15 148 -68 5 1811 251 71 24 0 chrX 160805304 160805346 -5844950 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 5 1811 1136 274 27 21 chrX 160805368 160805696 -5844600 + Lx7 LINE L1 6979 7308 -388 5 1811 561 15 0 0 chrX 160805697 160805763 -5844533 + (TG)n Simple_repeat Simple_repeat 2 67 0 5 1811 246 130 0 0 chrX 160805815 160805825 -5844471 + (A)n Simple_repeat Simple_repeat 1 10 0 5 1811 1285 35 14 0 chrX 160805825 160805970 -5844326 + B1_Mm SINE Alu 1 147 0 5 1811 246 130 0 0 chrX 160805970 160806005 -5844291 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1811 940 312 43 7 chrX 160806199 160806477 -5843819 + B4A SINE B4 1 288 -4 5 1811 1310 38 6 0 chrX 160806754 160806913 -5843383 + L1_Mus2 LINE L1 6406 6565 -1 5 1811 195 222 0 0 chrX 160807094 160807139 -5843157 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 1811 210 118 0 0 chrX 160807144 160807178 -5843118 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1811 336 248 39 19 chrX 160807409 160807512 -5842784 - MLT1A1 LTR MaLR -302 106 2 5 1811 295 250 418 11 chrX 160807627 160807743 -5842553 + B3A SINE B2 1 165 -33 5 1811 405 58 0 0 chrX 160807743 160807795 -5842501 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1811 295 250 51 26 chrX 160807795 160807817 -5842479 + B3A SINE B2 166 187 -11 5 1811 510 17 0 0 chrX 160809109 160809168 -5841128 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1811 25 0 0 0 chrX 160809568 160809593 -5840703 + AT_rich Low_complexity Low_complexity 1 25 0 5 1811 248 263 5 46 chrX 160810573 160810590 -5839706 + ID SINE ID 66 82 -210 6 1811 331 239 21 52 chrX 160810590 160810687 -5839609 + B1_Mm SINE Alu 1 94 -53 6 1811 396 0 0 0 chrX 160812011 160812055 -5838241 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1811 342 0 0 0 chrX 160812266 160812304 -5837992 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1811 1025 39 0 0 chrX 160813979 160814106 -5836190 - B1_Mus1 SINE Alu 0 148 22 6 1811 435 188 9 106 chrX 160814006 160814119 -5836177 - MT2B LTR ERVL -325 276 175 6 1811 567 282 126 29 chrX 160816060 160816235 -5834061 - B3A SINE B2 -5 193 2 6 1811 485 284 109 5 chrX 160816912 160817096 -5833200 - MER58B DNA MER1_type -136 205 3 6 1811 224 344 45 22 chrX 160817110 160817315 -5832981 + L2b LINE L2 3212 3424 -2 6 1811 190 277 0 21 chrX 160817827 160817875 -5832421 - L2a LINE L2 -3 3423 3377 6 1811 2391 247 30 9 chrX 160818043 160819005 -5831291 - Lx5 LINE L1 -15 7035 6155 6 1811 677 102 15 45 chrX 160819831 160819964 -5830332 - L1_Mus3 LINE L1 0 6638 6510 6 1811 501 255 3 8 chrX 160820353 160820463 -5829833 - Lx6 LINE L1 -599 6861 6772 6 1811 253 263 66 0 chrX 160820449 160820525 -5829771 - Lx7 LINE L1 -943 6753 6673 6 1811 217 346 19 29 chrX 160820553 160820657 -5829639 + MER5B DNA MER1_type 76 178 0 6 1811 284 259 89 20 chrX 160821701 160821847 -5828449 - Lx9 LINE L1 -31 7613 7458 6 1811 531 0 0 0 chrX 160822391 160822450 -5827846 + (TA)n Simple_repeat Simple_repeat 1 59 0 6 1811 456 281 9 0 chrX 160822503 160822617 -5827679 + PB1D10 SINE Alu 1 115 -2 6 1811 255 31 0 0 chrX 160822617 160822649 -5827647 + (CCA)n Simple_repeat Simple_repeat 1 32 0 6 1811 280 342 0 0 chrX 160822852 160822925 -5827371 + ID SINE ID 2 74 -150 6 1811 343 267 129 62 chrX 160823232 160823565 -5826731 - MLT1C LTR MaLR -8 619 45 6 1811 529 238 19 0 chrX 160824172 160824277 -5826019 - RSINE1 SINE B4 -56 109 3 6 1811 687 300 103 9 chrX 160824763 160824995 -5825301 + MER2 DNA MER2_type 87 340 -5 6 1812 528 93 0 0 chrX 160825378 160825453 -5824843 + (TA)n Simple_repeat Simple_repeat 1 75 0 6 1812 27 0 0 0 chrX 160826166 160826193 -5824103 + AT_rich Low_complexity Low_complexity 1 27 0 6 1812 1085 181 59 25 chrX 160826236 160826440 -5823856 - B3 SINE B2 -5 211 1 6 1812 453 311 50 85 chrX 160826504 160826764 -5823532 - MLT1E3 LTR MaLR -56 568 318 6 1812 518 301 0 140 chrX 160826781 160827009 -5823287 + B3A SINE B2 3 198 0 6 1812 700 231 48 0 chrX 160827417 160827564 -5822732 + B3A SINE B2 1 154 -44 6 1812 693 80 26 9 chrX 160827566 160827680 -5822616 + (CCCCCT)n Simple_repeat Simple_repeat 6 121 0 6 1812 260 132 0 54 chrX 160827729 160827785 -5822511 + CT-rich Low_complexity Low_complexity 3 55 0 6 1812 216 0 0 0 chrX 160827786 160827810 -5822486 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 1812 808 151 101 23 chrX 160827898 160828027 -5822269 + B1_Mur1 SINE Alu 3 141 -8 6 1812 1182 81 6 0 chrX 160828230 160828391 -5821905 + B2_Mm1t SINE B2 10 171 -22 6 1812 624 27 0 0 chrX 160828394 160828468 -5821828 + (GAAA)n Simple_repeat Simple_repeat 1 74 0 6 1812 600 294 156 0 chrX 160828469 160828649 -5821647 - B4A SINE B4 -83 209 2 6 1812 988 218 59 5 chrX 160829190 160829393 -5820903 + B3 SINE B2 3 216 0 6 1812 284 333 77 8 chrX 160829759 160829889 -5820407 - MIRb SINE MIR -42 226 88 6 1812 980 211 21 21 chrX 160831344 160831538 -5818758 - B3A SINE B2 -4 194 1 6 1812 260 284 15 0 chrX 160831896 160831963 -5818333 - MLT1I LTR MaLR -274 137 70 6 1812 630 136 102 16 chrX 160833077 160833204 -5817092 - B1_Mur1 SINE Alu 0 149 12 6 1812 499 342 6 0 chrX 160833444 160833625 -5816671 - B3A SINE B2 -16 182 1 6 1812 1198 214 61 61 chrX 160834053 160834366 -5815930 - ORR1E LTR MaLR -6 353 41 6 1812 589 261 105 159 chrX 160835437 160835828 -5814468 - MTEb LTR MaLR -3 376 7 6 1812 906 168 0 7 chrX 160836981 160837125 -5813171 + B1_Mur2 SINE Alu 1 143 -6 6 1812 706 265 18 53 chrX 160837509 160837736 -5812560 - ID_B1 SINE B4 -3 221 3 6 1812 896 0 10 0 chrX 160838000 160838104 -5812192 + (TAGA)n Simple_repeat Simple_repeat 1 105 0 6 1812 549 277 27 102 chrX 160838104 160838329 -5811967 - B3 SINE B2 -5 211 4 6 1812 306 0 0 0 chrX 160838901 160838935 -5811361 + (A)n Simple_repeat Simple_repeat 1 34 0 6 1812 629 158 8 0 chrX 160839118 160839238 -5811058 + CT-rich Low_complexity Low_complexity 6 126 0 6 1812 567 312 74 42 chrX 160839465 160839776 -5810520 - Lx8 LINE L1 -225 7248 6928 6 1812 430 254 79 45 chrX 160840933 160841110 -5809186 - RLTR41 LTR ERV1 0 446 264 6 1812 799 249 9 45 chrX 160841289 160841512 -5808784 - B3 SINE B2 -1 215 1 6 1812 5297 67 1 3 chrX 160841576 160842284 -5808012 - L1_Mus2 LINE L1 0 6566 5893 6 1812 2506 54 9 1 chrX 160842290 160842610 -5807686 + L1_Mus2 LINE L1 5588 5887 -751 6 1812 957 122 166 52 chrX 160842744 160842999 -5807297 + B2_Mm1t SINE B2 1 210 -6 6 1812 484 298 92 98 chrX 160843556 160843883 -5806413 - LTR31 LTR ERV1 -56 563 239 6 1812 858 228 60 0 chrX 160844927 160844948 -5805348 - B3 SINE B2 -19 197 175 6 1812 204 40 0 0 chrX 160844948 160844973 -5805323 + (TATG)n Simple_repeat Simple_repeat 4 28 0 6 1812 858 228 60 0 chrX 160844973 160845135 -5805161 - B3 SINE B2 -42 174 4 6 1812 1047 254 53 63 chrX 160845789 160846108 -5804188 - MTEa LTR MaLR -63 316 1 6 1812 250 295 113 26 chrX 160847534 160847649 -5802647 + MuLV-int LTR ERV1 7146 7270 -336 6 1812 311 257 48 103 chrX 160848007 160848172 -5802124 + RLTR19-int LTR ERVK 4209 4364 -1773 6 1812 325 248 196 49 chrX 160848232 160848457 -5801839 + RMER10A LTR ERVL 123 380 -62 6 1812 584 315 63 12 chrX 160848520 160848774 -5801522 + Lx8 LINE L1 6932 7198 -275 6 1812 343 273 113 8 chrX 160849003 160849136 -5801160 + RLTR41 LTR ERV1 300 446 0 6 1812 285 29 0 0 chrX 160849296 160849330 -5800966 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1812 504 0 0 0 chrX 160849330 160849385 -5800911 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 1812 382 226 24 0 chrX 160849536 160849620 -5800676 + B3 SINE B2 94 179 -37 6 1812 589 280 0 0 chrX 160849622 160849765 -5800531 - MTEa LTR MaLR -236 143 1 6 1812 605 248 21 7 chrX 160849767 160849909 -5800387 - MTEa-int LTR MaLR -2 1578 1435 6 1812 5191 219 10 28 chrX 160849935 160851063 -5799233 + Lx9 LINE L1 6407 7513 -131 6 1812 425 179 33 0 chrX 160851063 160851214 -5799082 + (TAGA)n Simple_repeat Simple_repeat 3 158 0 6 1812 3212 258 44 38 chrX 160851372 160852112 -5798184 - MTEa-int LTR MaLR -138 1442 701 6 1812 1446 143 9 0 chrX 160852112 160852335 -5797961 - URR1A DNA MER1_type 0 226 2 6 1812 3212 258 44 38 chrX 160852335 160852512 -5797784 - MTEa-int LTR MaLR -880 700 520 6 1812 741 196 7 40 chrX 160853310 160853459 -5796837 + B1_Mur4 SINE Alu 1 144 -6 6 1812 552 210 38 61 chrX 160853900 160854032 -5796264 - B1_Mur1 SINE Alu -20 129 1 6 1812 476 295 89 13 chrX 160854136 160854351 -5795945 - MTEa-int LTR MaLR -1310 270 2 6 1812 287 167 137 14 chrX 160854353 160854426 -5795870 - MTEa LTR MaLR 0 379 298 6 1812 230 297 14 0 chrX 160854466 160854540 -5795756 - ID SINE ID -149 75 1 6 1812 1043 312 49 69 chrX 160854962 160855060 -5795236 - MLT1H2 LTR MaLR -6 483 413 6 1812 378 0 0 0 chrX 160855060 160855102 -5795194 + (TTA)n Simple_repeat Simple_repeat 2 43 0 6 1812 1043 312 49 69 chrX 160855102 160855496 -5794800 - MLT1H2 LTR MaLR -77 412 1 6 1812 718 98 173 0 chrX 160856424 160856557 -5793739 - URR1A DNA MER1_type 0 226 71 6 1812 1132 56 21 0 chrX 160856659 160856802 -5793494 - B1_Mus2 SINE Alu 0 147 2 6 1812 281 250 34 11 chrX 160857354 160857443 -5792853 + C-rich Low_complexity Low_complexity 5 95 0 6 1812 464 285 165 0 chrX 160859300 160859458 -5790838 - MER58A DNA MER1_type -6 218 35 6 1812 310 329 58 6 chrX 160859482 160859653 -5790643 - MLT1H2 LTR MaLR 0 489 310 6 1812 467 229 28 9 chrX 160859878 160859984 -5790312 + PB1D10 SINE Alu 3 110 -7 6 1812 499 69 22 22 chrX 160863051 160863140 -5787156 + (TCTCTG)n Simple_repeat Simple_repeat 2 90 0 6 1812 1072 92 0 14 chrX 160863141 160863284 -5787012 - B1_Mus1 SINE Alu -6 142 2 6 1812 457 218 174 12 chrX 160863630 160863797 -5786499 - MIRc SINE MIR -5 263 70 6 1812 22 56 0 0 chrX 160865810 160865846 -5784450 + AT_rich Low_complexity Low_complexity 1 36 0 6 1812 213 39 0 0 chrX 160868388 160868414 -5781882 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 6 1812 379 229 91 45 chrX 160868440 160868550 -5781746 + B1F SINE Alu 34 148 -1 6 1812 333 0 0 0 chrX 160870559 160870596 -5779700 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 1812 354 138 0 0 chrX 160870596 160870654 -5779642 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 1812 1333 93 11 16 chrX 160872192 160872378 -5777918 + B2_Mm2 SINE B2 2 186 -9 6 1812 865 203 14 34 chrX 160872515 160872724 -5777572 - B3 SINE B2 -2 214 10 6 1812 1190 61 0 0 chrX 160872862 160873009 -5777287 + B1_Mus2 SINE Alu 1 147 0 6 1812 207 0 0 0 chrX 160873009 160873032 -5777264 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1812 259 294 0 0 chrX 160873239 160873307 -5776989 - Lx8 LINE L1 -251 7222 7155 6 1812 944 247 112 125 chrX 160873325 160873529 -5776767 + MT2B LTR ERVL 3 322 -279 6 1812 207 0 0 0 chrX 160873529 160873552 -5776744 + (GGAA)n Simple_repeat Simple_repeat 3 25 0 6 1812 944 239 58 61 chrX 160873552 160873830 -5776466 + MT2B LTR ERVL 323 600 -1 6 1812 661 253 56 22 chrX 160874608 160874786 -5775510 - B3 SINE B2 -7 209 26 6 1812 228 184 0 0 chrX 160876607 160876656 -5773640 + (TATG)n Simple_repeat Simple_repeat 4 52 0 6 1812 963 154 0 13 chrX 160876829 160876980 -5773316 + B1_Mur2 SINE Alu 1 149 0 7 1812 189 0 0 0 chrX 160876981 160877002 -5773294 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 7 1812 471 250 98 0 chrX 160878638 160878750 -5771546 - B1F2 SINE Alu -7 142 20 7 1812 579 243 79 23 chrX 160878764 160878941 -5771355 - ID_B1 SINE B4 -34 190 4 7 1812 263 342 62 25 chrX 160880179 160880341 -5769955 - L1ME3A LINE L1 -161 6012 5845 7 1812 231 222 0 53 chrX 160882128 160882185 -5768111 - L1MC4 LINE L1 -491 7551 7498 7 1812 273 269 208 24 chrX 160882420 160882675 -5767621 - L1MC4 LINE L1 -882 7160 6859 7 1812 225 0 0 0 chrX 160882848 160882873 -5767423 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 1812 225 266 134 50 chrX 160883003 160883122 -5767174 - MIR SINE MIR -100 162 34 7 1812 327 346 27 114 chrX 160884244 160884342 -5765954 - MLT1F2 LTR MaLR -288 272 172 7 1812 1180 168 9 23 chrX 160884342 160884561 -5765735 - B3 SINE B2 0 216 1 7 1812 327 346 27 114 chrX 160884561 160884759 -5765537 - MLT1F2 LTR MaLR -389 171 2 7 1812 447 265 83 38 chrX 160885165 160885322 -5764974 - RSINE1 SINE B4 0 165 2 7 1812 747 278 24 9 chrX 160885325 160885536 -5764760 - ID_B1 SINE B4 -7 217 4 7 1812 227 295 16 0 chrX 160885754 160885815 -5764481 - ID4_ SINE ID -18 65 4 7 1812 215 31 31 0 chrX 160885898 160885930 -5764366 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 7 1812 888 149 0 7 chrX 160885930 160886072 -5764224 - B1_Mur4 SINE Alu -9 141 1 7 1812 462 211 132 88 chrX 160886436 160886618 -5763678 - B3A SINE B2 -6 192 3 7 1812 1179 55 0 0 chrX 160886651 160886797 -5763499 - B1_Mus2 SINE Alu 0 147 2 7 1812 1150 170 18 9 chrX 160887088 160887308 -5762988 + URR1A DNA MER1_type 1 222 -4 7 1812 268 266 0 25 chrX 160887405 160887486 -5762810 + CT-rich Low_complexity Low_complexity 5 83 0 7 1812 282 56 0 0 chrX 160887625 160887661 -5762635 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 1812 673 199 14 7 chrX 160887753 160887900 -5762396 - B1_Mur4 SINE Alu 0 150 3 7 1812 417 39 0 0 chrX 160887976 160888027 -5762269 + (CAA)n Simple_repeat Simple_repeat 1 51 0 7 1812 425 284 0 0 chrX 160888116 160888218 -5762078 - B3A SINE B2 -96 102 1 7 1812 1133 241 57 70 chrX 160888837 160889137 -5761159 - MTE2b LTR MaLR 0 379 79 7 1812 799 241 31 25 chrX 160889137 160889333 -5760963 + B3A SINE B2 2 198 0 7 1812 1133 241 57 70 chrX 160889333 160889416 -5760880 - MTE2b LTR MaLR -301 78 1 7 1812 833 228 18 12 chrX 160890372 160890536 -5759760 + B3 SINE B2 4 168 -48 7 1812 207 146 20 40 chrX 160890548 160890598 -5759698 + L2c LINE L2 3334 3382 -5 7 1812 196 317 33 16 chrX 160890629 160890690 -5759606 - MIR SINE MIR -38 224 163 7 1812 662 236 109 11 chrX 160891273 160891457 -5758839 - B3 SINE B2 -14 202 1 7 1812 717 217 109 21 chrX 160892012 160892205 -5758091 - B3 SINE B2 -6 210 1 7 1812 947 135 0 45 chrX 160892503 160892658 -5757638 - B1_Mur4 SINE Alu 0 150 3 7 1812 244 318 11 22 chrX 160892773 160892863 -5757433 - MLT1K LTR MaLR -162 433 345 7 1812 534 103 0 0 chrX 160893456 160893534 -5756762 + (TG)n Simple_repeat Simple_repeat 1 78 0 7 1812 379 277 54 0 chrX 160895111 160895223 -5755073 - MER5A1 DNA MER1_type 0 166 49 7 1812 636 91 0 0 chrX 160896281 160896391 -5753905 - L1Md_F2 LINE L1 -1 6581 6472 7 1812 372 42 0 0 chrX 160897119 160897157 -5753139 + (TA)n Simple_repeat Simple_repeat 1 38 0 7 1812 438 20 0 0 chrX 160897157 160897208 -5753088 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 1812 372 42 0 0 chrX 160897208 160897217 -5753079 + (TA)n Simple_repeat Simple_repeat 2 10 0 7 1812 903 209 69 15 chrX 160897225 160897429 -5752867 + B3 SINE B2 2 216 0 7 1812 402 268 103 35 chrX 160897926 160898042 -5752254 + MER20 DNA MER1_type 6 129 -90 7 1812 2145 215 87 18 chrX 160898070 160898681 -5751615 + L1_Mur3 LINE L1 4664 5316 -564 7 1812 1932 171 36 51 chrX 160898681 160899070 -5751226 - ORR1C2 LTR MaLR 0 384 2 7 1812 4123 158 23 31 chrX 160899071 160899139 -5751157 - ORR1C2-int LTR MaLR 0 1509 1454 7 1812 1591 16 0 26 chrX 160899139 160899331 -5750965 - B2_Mm1a SINE B2 -6 187 1 7 1812 4123 158 23 31 chrX 160899331 160900008 -5750288 - ORR1C2-int LTR MaLR -56 1453 770 7 1812 273 167 56 0 chrX 160900018 160900072 -5750224 - ORR1C2-int LTR MaLR -887 622 566 7 1812 417 172 103 0 chrX 160900068 160900155 -5750141 - ORR1C2 LTR MaLR -288 96 1 7 1812 837 171 0 6 chrX 160900155 160900314 -5749982 + L1_Mur3 LINE L1 5708 5865 -15 7 1812 189 250 0 0 chrX 160900504 160900564 -5749732 + (CGA)n Simple_repeat Simple_repeat 2 61 0 7 1812 450 326 25 45 chrX 160900567 160900714 -5749582 + B3A SINE B2 1 149 -49 7 1812 396 111 0 0 chrX 160900714 160900777 -5749519 + (CA)n Simple_repeat Simple_repeat 2 64 0 7 1812 450 326 25 45 chrX 160900777 160900831 -5749465 + B3A SINE B2 150 198 0 7 1812 1247 70 13 9 chrX 160901324 160901640 -5748656 + (TTTC)n Simple_repeat Simple_repeat 1 317 0 7 1812 888 106 20 7 chrX 160901796 160901948 -5748348 + (TTTC)n Simple_repeat Simple_repeat 1 154 0 7 1812 374 158 18 0 chrX 160901966 160902036 -5748260 - B2_Mm2 SINE B2 -77 121 46 7 1812 1218 106 6 0 chrX 160902090 160902260 -5748036 - B2_Mm1t SINE B2 -22 171 1 7 1812 27 29 0 0 chrX 160902474 160902508 -5747788 + AT_rich Low_complexity Low_complexity 1 34 0 7 1812 8154 92 28 1 chrX 160902508 160903656 -5746640 - Lx3B LINE L1 -2 6971 5793 7 1812 1849 46 12 0 chrX 160904034 160904275 -5746021 + L1Md_T LINE L1 5342 5585 -298 7 1812 8424 33 0 1 chrX 160904276 160905271 -5745025 + L1Md_T LINE L1 5587 6580 -2 7 1812 237 185 0 18 chrX 160905276 160905331 -5744965 + A-rich Low_complexity Low_complexity 4 57 0 7 1812 246 23 0 65 chrX 160906017 160906063 -5744233 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 7 1812 25 51 0 0 chrX 160906344 160906383 -5743913 + AT_rich Low_complexity Low_complexity 1 39 0 7 1812 447 196 373 13 chrX 160906525 160906675 -5743621 - B3 SINE B2 -10 206 3 7 1812 274 270 0 0 chrX 160906677 160906751 -5743545 + MER33 DNA MER1_type 242 315 -9 7 1812 3029 236 51 4 chrX 160907326 160908046 -5742250 - Lx6 LINE L1 -1 7459 6706 7 1812 511 270 93 22 chrX 160908437 160908619 -5741677 - Tigger7 DNA MER2_type -5 2486 2292 7 1812 896 300 76 8 chrX 160908671 160909067 -5741229 + Lx9 LINE L1 7044 7466 -178 7 1812 26 0 0 0 chrX 160909073 160909099 -5741197 + AT_rich Low_complexity Low_complexity 1 26 0 7 1812 462 36 0 0 chrX 160909102 160909158 -5741138 + (TA)n Simple_repeat Simple_repeat 2 57 0 7 1812 535 252 59 41 chrX 160909489 160909659 -5740637 - Tigger7 DNA MER2_type -185 2306 2134 7 1812 597 336 83 31 chrX 160909665 160909954 -5740342 - Tigger7 DNA MER2_type -2187 304 1 7 1812 25 53 0 18 chrX 160910168 160910182 -5740114 + AT_rich Low_complexity Low_complexity 1 14 0 7 1812 941 229 20 0 chrX 160910182 160910383 -5739913 - B3 SINE B2 -11 205 1 7 1812 25 53 0 18 chrX 160910383 160910425 -5739871 + AT_rich Low_complexity Low_complexity 1 42 0 7 1812 419 92 15 0 chrX 160910431 160910496 -5739800 + (TA)n Simple_repeat Simple_repeat 1 66 0 7 1812 470 193 80 35 chrX 160910618 160910731 -5739565 + MTC LTR MaLR 3 120 -301 7 1812 35088 65 3 7 chrX 160910734 160916899 -5733397 - L1Md_F2 LINE L1 -2 6580 450 7 1812 31238 89 11 6 chrX 160916920 160922995 -5727301 - L1Md_F2 LINE L1 -96 6486 380 7 1812 1849 129 61 7 chrX 160923010 160923307 -5726989 + MTC LTR MaLR 109 421 0 7 1812 281 267 26 13 chrX 160923425 160923501 -5726795 - ID4_ SINE ID -3 80 4 7 1812 571 331 49 3 chrX 160923503 160923791 -5726505 + Lx9 LINE L1 7166 7466 -178 7 1812 25 0 0 0 chrX 160923797 160923822 -5726474 + AT_rich Low_complexity Low_complexity 1 25 0 7 1812 387 60 0 0 chrX 160923826 160923876 -5726420 + (TA)n Simple_repeat Simple_repeat 2 51 0 7 1812 543 233 59 41 chrX 160924207 160924377 -5725919 - Tigger7 DNA MER2_type -185 2306 2134 7 1812 611 332 83 31 chrX 160924383 160924672 -5725624 - Tigger7 DNA MER2_type -2187 304 1 7 1812 969 222 30 10 chrX 160924900 160925100 -5725196 - B3 SINE B2 -11 205 2 7 1812 180 53 51 26 chrX 160925149 160925188 -5725108 + (TA)n Simple_repeat Simple_repeat 1 40 0 7 1812 455 204 90 27 chrX 160925309 160925420 -5724876 + MTC LTR MaLR 3 120 -301 7 1812 9638 83 4 4 chrX 160925455 160927569 -5722727 - L1Md_F2 LINE L1 -19 6563 4448 7 1812 31642 70 24 8 chrX 160927552 160933529 -5716767 - L1Md_F2 LINE L1 0 6582 492 7 1812 1767 143 61 7 chrX 160933531 160933827 -5716469 + MTC LTR MaLR 110 421 0 7 1812 7591 33 1 0 chrX 160933886 160934786 -5715510 + L1Md_T LINE L1 5682 6582 0 7 1812 281 267 26 13 chrX 160934859 160934935 -5715361 - ID4_ SINE ID -3 80 4 7 1812 580 329 56 0 chrX 160934937 160935223 -5715073 + Lx9 LINE L1 7165 7466 -178 7 1812 26 0 0 0 chrX 160935229 160935255 -5715041 + AT_rich Low_complexity Low_complexity 1 26 0 7 1812 309 109 0 0 chrX 160935258 160935304 -5714992 + (TA)n Simple_repeat Simple_repeat 2 47 0 7 1812 535 252 59 41 chrX 160935636 160935806 -5714490 - Tigger7 DNA MER2_type -185 2306 2134 7 1812 611 332 83 31 chrX 160935812 160936101 -5714195 - Tigger7 DNA MER2_type -2187 304 1 7 1812 46 71 0 9 chrX 160936315 160936329 -5713967 + AT_rich Low_complexity Low_complexity 1 14 0 7 1812 901 240 20 0 chrX 160936329 160936529 -5713767 - B3 SINE B2 -11 205 2 7 1812 46 71 0 9 chrX 160936529 160936627 -5713669 + AT_rich Low_complexity Low_complexity 1 98 0 7 1812 2399 132 58 13 chrX 160936747 160937145 -5713151 + MTC LTR MaLR 3 418 -3 7 1812 264 299 39 13 chrX 160937253 160937331 -5712965 - ID SINE ID -141 83 4 7 1812 711 179 0 0 chrX 160937357 160937497 -5712799 + (TA)n Simple_repeat Simple_repeat 2 141 0 7 1812 580 248 7 74 chrX 160937581 160937729 -5712567 - B1_Mur3 SINE Alu -6 143 6 7 1812 248 259 29 171 chrX 160937618 160937758 -5712538 - MT2B LTR ERVL -343 258 139 7 1812 737 296 189 13 chrX 160937888 160938199 -5712097 - MTEa LTR MaLR -13 366 1 7 1812 262 211 41 31 chrX 160938765 160938863 -5711433 + (TATG)n Simple_repeat Simple_repeat 1 99 0 7 1812 23 0 0 0 chrX 160938976 160938999 -5711297 + AT_rich Low_complexity Low_complexity 1 23 0 7 1812 657 292 6 19 chrX 160939014 160939171 -5711125 - RSINE1 SINE B4 -2 163 9 7 1812 279 271 36 70 chrX 160940367 160940486 -5709810 - B1F1 SINE Alu -2 147 10 7 1812 342 0 0 0 chrX 160940737 160940775 -5709521 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1812 442 233 52 8 chrX 160941377 160941511 -5708785 - L1MD1 LINE L1 -1 6241 6102 7 1812 862 275 75 50 chrX 160941534 160941813 -5708483 + B4A SINE B4 7 292 0 8 1812 255 264 11 32 chrX 160941860 160941954 -5708342 - L1MD2 LINE L1 -163 6196 6105 8 1812 292 238 0 70 chrX 160942000 160942086 -5708210 - B3A SINE B2 -16 182 103 8 1812 563 229 322 4 chrX 160942137 160942370 -5707926 - RMER21B LTR ERV1 -277 565 259 8 1812 272 189 129 20 chrX 160942330 160942452 -5707844 - B3A SINE B2 -51 144 1 8 1812 723 208 27 14 chrX 160942624 160942770 -5707526 - B1_Mur4 SINE Alu 0 150 3 8 1812 475 265 75 15 chrX 160942975 160943109 -5707187 + B1F2 SINE Alu 6 147 -2 8 1812 288 0 0 0 chrX 160944205 160944237 -5706059 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 1812 349 225 14 0 chrX 160944858 160944929 -5705367 - PB1D10 SINE Alu -19 98 27 8 1812 378 0 0 0 chrX 160944932 160944974 -5705322 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 1812 740 270 71 85 chrX 160945734 160946029 -5704267 - B4A SINE B4 0 292 2 8 1812 216 0 0 0 chrX 160946304 160946328 -5703968 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 1812 1178 89 0 6 chrX 160946335 160946505 -5703791 - B2_Mm2 SINE B2 -26 169 1 8 1812 542 344 88 47 chrX 160947062 160947505 -5702791 + MLT1C LTR MaLR 1 461 -6 8 1812 512 272 41 0 chrX 160947642 160947789 -5702507 - RSINE1 SINE B4 -8 157 5 8 1812 217 310 0 0 chrX 160948054 160948112 -5702184 + GA-rich Low_complexity Low_complexity 2 59 0 8 1812 3118 77 7 2 chrX 160948156 160948559 -5701737 - L1_Mus1 LINE L1 0 6567 6163 8 1812 200 200 25 0 chrX 160949559 160949599 -5700697 + CT-rich Low_complexity Low_complexity 2 42 0 8 1812 1311 280 135 7 chrX 160949822 160950408 -5699888 + L1MB7 LINE L1 5514 6174 -10 8 1812 307 302 123 23 chrX 160952540 160952760 -5697536 - L1MA6 LINE L1 -202 6098 5857 8 1812 195 114 0 0 chrX 160953131 160953166 -5697130 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 8 1812 614 332 42 49 chrX 160953279 160953567 -5696729 + B4A SINE B4 7 292 0 8 1812 370 299 111 31 chrX 160953645 160953807 -5696489 + MER20 DNA MER1_type 20 194 -25 8 226 22252 76 5 2 chrX 160953995 160957637 -5692659 - L1Md_F2 LINE L1 -16 6566 2919 8 1813 2455 180 69 7 chrX 160957609 160958272 -5692024 - L1Md_F2 LINE L1 -5922 694 98 8 1813 459 0 0 0 chrX 160958387 160958438 -5691858 + (TC)n Simple_repeat Simple_repeat 2 52 0 8 1813 1006 192 59 0 chrX 160959072 160959275 -5691021 - B3 SINE B2 0 216 2 8 1813 225 325 0 0 chrX 160959708 160959785 -5690511 - MLT1I LTR MaLR -263 148 72 8 1813 270 291 41 33 chrX 160960012 160960133 -5690163 + L1ME3A LINE L1 6050 6171 -2 8 1813 503 331 35 35 chrX 160960423 160960708 -5689588 + B4A SINE B4 8 292 0 8 1813 567 40 0 0 chrX 160960737 160960811 -5689485 + (CA)n Simple_repeat Simple_repeat 2 75 0 8 1813 226 220 0 0 chrX 160960812 160960862 -5689434 + (CCA)n Simple_repeat Simple_repeat 3 52 0 8 1813 235 280 12 8 chrX 160960910 160960994 -5689302 + BC1_Mm scRNA scRNA 1 82 -1 8 1813 216 293 0 17 chrX 160961047 160961106 -5689190 - MER5B DNA MER1_type -105 73 16 8 1813 1377 207 81 66 chrX 160961194 160961289 -5689007 - MTD LTR MaLR -3 416 331 8 1813 3810 58 4 38 chrX 160961289 160961790 -5688506 - L1_Mus1 LINE L1 0 6567 6084 8 1813 1377 207 81 66 chrX 160961790 160962103 -5688193 - MTD LTR MaLR -89 330 2 8 1813 318 285 67 34 chrX 160962237 160962386 -5687910 - MIRb SINE MIR -36 232 79 8 1813 987 9 0 0 chrX 160962512 160962624 -5687672 + (TTTCC)n Simple_repeat Simple_repeat 5 116 0 8 1813 267 104 0 0 chrX 160962624 160962671 -5687625 + (TCTG)n Simple_repeat Simple_repeat 1 48 0 8 1813 387 0 0 0 chrX 160962751 160962794 -5687502 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 1813 402 21 0 0 chrX 160963359 160963406 -5686890 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1813 3419 57 25 0 chrX 160963741 160964177 -5686119 - L1_Mus3 LINE L1 0 6638 6192 8 1813 255 324 29 29 chrX 160964635 160964740 -5685556 - B1F1 SINE Alu -39 110 6 8 1813 588 313 65 53 chrX 160965439 160965685 -5684611 + B4A SINE B4 1 249 -43 8 1813 209 59 59 0 chrX 160965757 160965791 -5684505 + (CATA)n Simple_repeat Simple_repeat 3 38 0 8 1813 319 300 101 82 chrX 160966136 160966535 -5683761 - MLT1F2 LTR MaLR -15 545 101 8 1813 217 249 17 34 chrX 160966591 160966834 -5683462 + GA-rich Low_complexity Low_complexity 1 238 0 8 1813 237 253 11 0 chrX 160967552 160967726 -5682570 + CT-rich Low_complexity Low_complexity 1 175 0 8 1813 481 202 168 0 chrX 160967728 160967847 -5682449 - B1_Mur3 SINE Alu -8 141 3 8 1813 447 340 109 11 chrX 160968044 160968309 -5681987 - MLT1H LTR MaLR -249 300 10 8 1813 182 368 13 65 chrX 160968371 160968525 -5681771 - L2b LINE L2 -212 3163 3018 8 1813 374 279 125 59 chrX 160968849 160969154 -5681142 + LTR37B LTR ERV1 140 464 -4 8 1813 1117 41 14 0 chrX 160970113 160970260 -5680036 + (GA)n Simple_repeat Simple_repeat 1 149 0 8 1813 614 247 21 50 chrX 160970282 160970505 -5679791 - L1MA4 LINE L1 -203 5953 5706 8 1813 3518 57 7 0 chrX 160970508 160970944 -5679352 - L1_Mus1 LINE L1 0 6567 6129 8 1813 233 337 0 0 chrX 160972785 160972871 -5677425 + (TG)n Simple_repeat Simple_repeat 1 86 0 8 1813 674 317 69 25 chrX 160972874 160973149 -5677147 - B4 SINE B4 -5 287 1 8 1813 1400 149 9 5 chrX 160973785 160974008 -5676288 - URR1B DNA MER1_type 0 225 2 8 1813 324 276 19 9 chrX 160974774 160974880 -5675416 + ORSL DNA Tip100 158 264 -11 8 1813 967 140 0 16 chrX 160974956 160975138 -5675158 + CT-rich Low_complexity Low_complexity 2 180 0 8 1813 684 203 36 14 chrX 160975150 160975290 -5675006 - B1_Mur2 SINE Alu -6 143 1 8 1813 317 262 40 63 chrX 160976062 160976237 -5674059 + MER5B DNA MER1_type 8 178 0 8 1813 593 257 42 53 chrX 160976935 160977124 -5673172 + B3A SINE B2 10 196 -2 8 1813 445 155 75 37 chrX 160977214 160977321 -5672975 + Lx9 LINE L1 7527 7637 -7 8 1813 227 333 31 16 chrX 160977832 160977960 -5672336 - MIRb SINE MIR -20 248 119 8 1813 377 306 34 45 chrX 160978329 160978507 -5671789 + MER20 DNA MER1_type 44 219 0 8 1813 4299 56 27 12 chrX 160978917 160979476 -5670820 + L1_Mus1 LINE L1 6001 6567 0 8 1813 185 288 15 29 chrX 160979862 160979930 -5670366 - L2a LINE L2 -1 3425 3359 8 1813 351 282 166 53 chrX 160980062 160980309 -5669987 + B4A SINE B4 2 276 -16 8 1813 459 35 0 0 chrX 160980362 160980419 -5669877 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 1813 955 199 293 13 chrX 160980768 160981068 -5669228 + MTC LTR MaLR 1 384 -37 8 1813 450 0 0 0 chrX 160981068 160981118 -5669178 + (TTTTG)n Simple_repeat Simple_repeat 3 52 0 8 1813 336 298 60 15 chrX 160982233 160982363 -5667933 - MLT1E1A LTR MaLR -16 611 476 8 1813 825 226 56 145 chrX 160982363 160982721 -5667575 - MTEa LTR MaLR 0 379 54 8 1813 566 313 76 70 chrX 160982834 160983150 -5667146 - MLT1E1A LTR MaLR -190 490 173 8 1813 5068 114 34 17 chrX 160984659 160985429 -5664867 + Lx4A LINE L1 6276 7058 0 8 1813 212 258 30 0 chrX 160986297 160986363 -5663933 - L2 LINE L2 -2116 1303 1236 8 1813 282 29 0 0 chrX 160986929 160986964 -5663332 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 1813 544 219 9 0 chrX 160987014 160987119 -5663177 - B1F SINE Alu -21 128 23 8 1813 1076 246 246 0 chrX 160987597 160987898 -5662398 + MTEa LTR MaLR 1 375 -4 8 1813 322 394 0 59 chrX 160989816 160989986 -5660310 - MER63A DNA AcHobo -40 170 11 8 1813 322 162 14 29 chrX 160990383 160990453 -5659843 - MTD LTR MaLR -14 407 339 8 1813 693 241 97 31 chrX 160990466 160990693 -5659603 - MTD LTR MaLR -160 259 18 8 1813 564 225 22 37 chrX 160990754 160990888 -5659408 + B1F SINE Alu 7 138 -11 8 1813 245 232 0 28 chrX 160991163 160991234 -5659062 + A-rich Low_complexity Low_complexity 3 71 0 8 1813 662 285 100 50 chrX 160991473 160991732 -5658564 + B4 SINE B4 6 277 -15 8 1813 5304 75 7 1 chrX 160991906 160992598 -5657698 - L1_Mus1 LINE L1 -1 6566 5871 8 1813 467 334 77 32 chrX 160993243 160993583 -5656713 + MT2A LTR ERVL 1 355 -178 8 1813 623 270 5 48 chrX 160993655 160993842 -5656454 - B3A SINE B2 -18 180 2 8 1813 332 269 138 25 chrX 160993880 160994040 -5656256 + MT2A LTR ERVL 342 519 -14 8 1813 342 0 0 0 chrX 160994105 160994143 -5656153 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 1813 276 100 0 0 chrX 160994143 160994183 -5656113 + (TATG)n Simple_repeat Simple_repeat 2 41 0 8 1813 229 297 98 33 chrX 160994420 160994542 -5655754 + Charlie4a DNA MER1_type 7 136 -372 8 1813 402 171 26 0 chrX 160994542 160994618 -5655678 - Lx4B LINE L1 -656 6402 6325 8 1813 3863 145 28 6 chrX 160994618 160995263 -5655033 + Lx4B LINE L1 6400 7058 0 8 1813 249 272 99 35 chrX 160995300 160995441 -5654855 + Charlie4a DNA MER1_type 138 287 -221 8 1813 315 71 0 0 chrX 160995913 160995955 -5654341 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 8 1813 281 372 115 46 chrX 160997505 160997722 -5652574 + LTR16E1 LTR ERVL 32 263 -275 8 1813 22 56 0 0 chrX 160997815 160997851 -5652445 + AT_rich Low_complexity Low_complexity 1 36 0 8 1813 373 291 64 0 chrX 160997898 160998008 -5652288 - B3A SINE B2 -81 117 1 8 1813 4423 10 0 0 chrX 160998221 160998703 -5651593 - LTRIS_Mm LTR ERV1 0 482 1 8 1813 268 327 40 0 chrX 160998705 160998806 -5651490 + LTR33B LTR ERVL 23 127 -376 8 1813 988 189 50 9 chrX 160998878 160999097 -5651199 + Lx4B LINE L1 6827 7054 -4 8 1813 314 266 159 30 chrX 160999159 160999291 -5651005 + LTR33B LTR ERVL 334 482 -21 8 1813 657 234 81 139 chrX 161000195 161000468 -5649828 + ORR1E LTR MaLR 1 257 -102 1 1813 225 0 0 0 chrX 161000589 161000614 -5649682 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1813 36254 30 0 0 chrX 161000616 161007261 -5643035 - L1Md_T LINE L1 0 6585 1 3 1813 405 0 0 0 chrX 161008389 161008434 -5641862 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1813 243 0 0 0 chrX 161008434 161008460 -5641836 + (GA)n Simple_repeat Simple_repeat 1 27 0 5 1813 306 225 0 0 chrX 161008524 161008604 -5641692 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 6 1813 191 242 0 101 chrX 161009566 161009635 -5640661 - L2 LINE L2 -1343 2076 2015 7 1813 600 14 0 0 chrX 161009793 161009862 -5640434 + (TA)n Simple_repeat Simple_repeat 2 70 0 8 1813 766 302 49 8 chrX 161009873 161010140 -5640156 - B4 SINE B4 -14 278 1 9 1813 510 228 8 38 chrX 161010223 161010594 -5639702 + (CA)n Simple_repeat Simple_repeat 1 360 0 1 1813 422 310 87 5 chrX 161011413 161011598 -5638698 - MIR SINE MIR -62 200 1 1 1813 210 341 0 0 chrX 161011624 161011715 -5638581 + (TCCA)n Simple_repeat Simple_repeat 4 94 0 1 1813 186 43 0 0 chrX 161011984 161012007 -5638289 + (TATATG)n Simple_repeat Simple_repeat 1 23 0 1 1813 319 81 31 31 chrX 161012068 161012132 -5638164 + (TCTCTG)n Simple_repeat Simple_repeat 5 68 0 1 1813 398 285 6 61 chrX 161012132 161012259 -5638037 - PB1D10 SINE Alu -21 128 6 1 1813 379 310 43 79 chrX 161012804 161012944 -5637352 - ID_B1 SINE B4 -4 220 86 1 1813 302 115 0 19 chrX 161013552 161013605 -5636691 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1813 1016 252 92 8 chrX 161013615 161013855 -5636441 - B4A SINE B4 -32 260 1 1 1813 283 303 126 118 chrX 161014217 161014565 -5635731 + MLT1J1 LTR MaLR 92 442 -2 1 1813 498 170 0 0 chrX 161015212 161015306 -5634990 + CT-rich Low_complexity Low_complexity 2 95 0 2 1813 254 147 324 0 chrX 161015853 161015921 -5634375 + B1F SINE Alu 49 138 -11 2 1813 305 307 126 33 chrX 161015954 161016136 -5634160 - MIRb SINE MIR -6 262 64 2 1813 322 327 68 37 chrX 161016203 161016365 -5633931 - MIRb SINE MIR -40 228 62 2 1813 378 0 0 0 chrX 161016647 161016689 -5633607 + (TC)n Simple_repeat Simple_repeat 2 43 0 2 1813 351 0 0 0 chrX 161016689 161016727 -5633569 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1813 561 295 89 13 chrX 161017247 161017484 -5632812 + Charlie5 DNA MER1_type 2369 2623 -1 2 1813 295 261 49 32 chrX 161019027 161019150 -5631146 - Lx9 LINE L1 -1207 6437 6313 2 1813 24 0 0 0 chrX 161019184 161019208 -5631088 + AT_rich Low_complexity Low_complexity 1 24 0 2 1813 236 243 27 0 chrX 161019222 161019296 -5631000 + (TA)n Simple_repeat Simple_repeat 1 76 0 2 1813 463 294 255 28 chrX 161019357 161019792 -5630504 + Lx9 LINE L1 7090 7622 -22 3 1813 5477 47 5 0 chrX 161019805 161020469 -5629827 + L1_Mus1 LINE L1 5901 6567 0 3 1813 1061 119 37 26 chrX 161020499 161020689 -5629607 + B2_Mm2 SINE B2 4 195 0 3 1813 387 0 0 0 chrX 161020744 161020787 -5629509 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1813 267 54 0 0 chrX 161020802 161020839 -5629457 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1813 577 0 27 0 chrX 161020839 161020911 -5629385 + (GA)n Simple_repeat Simple_repeat 2 76 0 3 1813 555 275 142 20 chrX 161021400 161021597 -5628699 - ID_B1 SINE B4 -1 223 3 3 1813 405 291 40 47 chrX 161021600 161021748 -5628548 - B1F SINE Alu 0 149 3 3 1813 245 352 45 67 chrX 161021764 161021898 -5628398 - MLT1I LTR MaLR -239 172 42 3 1813 295 298 48 49 chrX 161022981 161023126 -5627170 - MER90 LTR ERV1 -273 341 188 3 1813 273 29 0 0 chrX 161024532 161024566 -5625730 + (T)n Simple_repeat Simple_repeat 1 34 0 4 1813 304 258 0 0 chrX 161024924 161024990 -5625306 - MER20 DNA MER1_type -57 162 97 4 1813 215 273 49 49 chrX 161026258 161026339 -5623957 - B2_Mm1t SINE B2 -111 82 2 4 1813 238 372 8 50 chrX 161026397 161026516 -5623780 + MIR SINE MIR 19 132 -130 4 1813 3183 80 11 30 chrX 161027054 161027521 -5622775 + Lx LINE L1 6197 6654 0 4 1813 198 167 0 0 chrX 161028330 161028366 -5621930 + A-rich Low_complexity Low_complexity 1 36 0 4 1813 450 0 0 0 chrX 161028370 161028420 -5621876 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1813 244 243 86 78 chrX 161028548 161028664 -5621632 + L1_Rod LINE L1 5716 5832 -15 4 1813 479 253 8 7 chrX 161028733 161028896 -5621400 + L1MA4A LINE L1 5745 5908 -392 4 1813 324 0 0 0 chrX 161029028 161029064 -5621232 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1813 272 263 105 0 chrX 161030446 161030541 -5619755 + MER20 DNA MER1_type 17 121 -98 5 1813 401 311 87 7 chrX 161030560 161030709 -5619587 + MLT1D LTR MaLR 329 489 -16 5 1813 385 288 121 40 chrX 161031659 161031858 -5618438 - B3 SINE B2 0 216 2 5 1813 380 341 40 8 chrX 161031996 161032120 -5618176 + RSINE1 SINE B4 4 131 -34 5 1813 254 302 151 17 chrX 161032733 161032905 -5617391 + L3 LINE CR1 4132 4326 -163 5 1813 5096 35 15 2 chrX 161033305 161033913 -5616383 + L1Md_T LINE L1 5965 6580 -2 5 1813 3563 211 66 125 chrX 161034635 161035304 -5614992 + Lx9 LINE L1 6521 7223 -421 5 1813 2252 79 15 25 chrX 161035304 161035630 -5614666 - L1Md_F2 LINE L1 -1 6581 6259 5 1813 3563 211 66 125 chrX 161035630 161036144 -5614152 + Lx9 LINE L1 7224 7634 -10 5 1813 646 250 23 0 chrX 161036150 161036282 -5614014 + RSINE1 SINE B4 13 147 -18 5 1813 495 0 0 0 chrX 161036282 161036337 -5613959 + (TC)n Simple_repeat Simple_repeat 1 55 0 5 1813 483 18 0 0 chrX 161036337 161036392 -5613904 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1813 2524 76 6 3 chrX 161036918 161037262 -5613034 - L1_Mus3 LINE L1 -3 6635 6291 6 1813 697 271 15 78 chrX 161038648 161038852 -5611444 + B3A SINE B2 1 191 -25 6 1813 237 222 54 120 chrX 161038877 161038969 -5611327 + ID_B1 SINE B4 56 141 -83 6 1813 2924 32 34 34 chrX 161039006 161039391 -5610905 - L1Md_F3 LINE L1 -2 6582 6198 6 1813 460 329 14 34 chrX 161039394 161039542 -5610754 + B4A SINE B4 142 286 -6 6 1813 365 269 103 9 chrX 161039475 161039591 -5610705 + B3 SINE B2 90 216 0 6 1813 1233 41 0 0 chrX 161040327 161040474 -5609822 + B1_Mus2 SINE Alu 1 147 0 6 1813 7295 130 42 10 chrX 161041203 161042374 -5607922 - L1_Mur2 LINE L1 -48 5829 4616 6 1813 2019 98 32 65 chrX 161042374 161042714 -5607582 + ORR1A4 LTR MaLR 1 329 0 6 1813 7295 130 42 10 chrX 161042714 161042829 -5607467 - L1_Mur2 LINE L1 -1262 4615 4502 6 1813 228 170 0 0 chrX 161042857 161042910 -5607386 - Lx8 LINE L1 -2 7471 7419 7 1813 28628 105 2 2 chrX 161042931 161048176 -5602120 - L1_Mus1 LINE L1 -2 6565 1320 7 1813 2164 135 149 5 chrX 161048181 161048569 -5601727 - RLTR44B LTR ERVK -5 444 1 7 1813 3449 141 126 6 chrX 161048569 161049455 -5600841 - L1_Mus1 LINE L1 -5399 1325 334 7 1813 303 279 132 56 chrX 161049483 161049627 -5600669 - Lx8 LINE L1 -62 7411 7257 7 1813 859 255 10 62 chrX 161049679 161049888 -5600408 - B3 SINE B2 -18 198 1 7 1813 26 0 0 0 chrX 161051462 161051488 -5598808 + AT_rich Low_complexity Low_complexity 1 26 0 7 1813 1226 114 17 0 chrX 161051649 161051825 -5598471 + B2_Mm2 SINE B2 1 179 -16 7 1813 2580 228 21 5 chrX 161051954 161052519 -5597777 + Lx5 LINE L1 6477 7050 0 7 1813 192 111 0 0 chrX 161052584 161052620 -5597676 + (T)n Simple_repeat Simple_repeat 1 36 0 7 1813 1817 114 0 0 chrX 161052620 161052893 -5597403 - RMER16-int LTR ERVK -1930 3476 3204 7 1813 31394 39 1 0 chrX 161052894 161059171 -5591125 + L1Md_T LINE L1 1 5589 -297 8 1813 8990 5 0 0 chrX 161059171 161060167 -5590129 + L1Md_T LINE L1 5590 6585 0 8 1813 1353 118 39 0 chrX 161060167 161060371 -5589925 - RMER16-int LTR ERVK -2192 3214 3003 7 1813 1738 237 2 25 chrX 161060371 161060769 -5589527 + Lx7 LINE L1 6921 7309 -387 8 1813 246 95 0 0 chrX 161060772 161060814 -5589482 + (TTG)n Simple_repeat Simple_repeat 1 42 0 8 1813 198 0 0 0 chrX 161060853 161060875 -5589421 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 8 1813 22 0 0 0 chrX 161061013 161061035 -5589261 + AT_rich Low_complexity Low_complexity 1 22 0 8 1813 459 0 0 0 chrX 161061411 161061462 -5588834 + (TC)n Simple_repeat Simple_repeat 1 51 0 8 1813 1338 299 80 18 chrX 161061473 161062183 -5588113 - L1_Mur3 LINE L1 -11 5869 5116 8 1813 1181 271 22 25 chrX 161062235 161062595 -5587701 - ORR1E LTR MaLR 0 359 1 8 1813 1867 172 29 65 chrX 161063862 161064248 -5586048 - ORR1C1 LTR MaLR 0 378 7 8 1813 1757 109 115 36 chrX 161065211 161065516 -5584780 - Lx3_Mus LINE L1 -8 7001 6673 8 1813 3263 84 53 0 chrX 161065500 161065974 -5584322 - Lx3_Mus LINE L1 -684 6325 5827 8 1813 2095 61 11 7 chrX 161065977 161066258 -5584038 - L1_Mus3 LINE L1 -2 6636 6355 9 1813 8199 79 37 6 chrX 161066237 161066790 -5583506 - Lx3_Mus LINE L1 -43 5843 5267 8 1813 399 21 0 0 chrX 161066790 161066838 -5583458 + (TG)n Simple_repeat Simple_repeat 1 48 0 9 1813 8199 79 37 6 chrX 161066838 161067443 -5582853 - Lx3_Mus LINE L1 -620 5266 4650 8 1813 459 286 20 10 chrX 161067461 161067659 -5582637 + L1M5 LINE L1 5274 5473 -971 9 1813 4921 181 33 6 chrX 161067699 161068740 -5581556 - Lx5 LINE L1 -457 6593 5506 9 1813 293 229 0 0 chrX 161068735 161068796 -5581500 - L1M4 LINE L1 -402 5782 5722 9 1813 2756 162 86 23 chrX 161068777 161069347 -5580949 - L1_Rod LINE L1 -58 5789 5184 9 1813 4732 205 49 55 chrX 161069347 161069956 -5580340 + Lx9 LINE L1 6476 7110 -534 9 1813 961 101 14 0 chrX 161069956 161070095 -5580201 + B1_Mus1 SINE Alu 3 143 -5 9 1813 4162 25 0 6 chrX 161070099 161070584 -5579712 + L1Md_F2 LINE L1 6089 6570 -12 9 1813 4732 205 49 55 chrX 161070584 161071145 -5579151 + Lx9 LINE L1 7111 7644 0 9 1813 26 74 0 0 chrX 161071150 161071204 -5579092 + AT_rich Low_complexity Low_complexity 1 54 0 9 1813 330 45 0 0 chrX 161071881 161071925 -5578371 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1813 252 348 42 67 chrX 161072437 161072557 -5577739 - MER5C1 DNA MER1_type -146 117 1 1 1813 428 317 62 14 chrX 161072565 161072776 -5577520 + MER58A DNA MER1_type 1 221 -3 1 1813 195 42 0 0 chrX 161073371 161073395 -5576901 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1 1813 807 305 97 33 chrX 161073671 161074038 -5576258 - MTE2a LTR MaLR -5 414 6 1 1813 2416 229 85 45 chrX 161074834 161075505 -5574791 - Lx7 LINE L1 -194 7502 6805 1 1813 356 303 73 0 chrX 161075600 161075709 -5574587 + LTR16E1 LTR ERVL 416 532 -6 1 1813 385 286 10 0 chrX 161076704 161076802 -5573494 + MTEa LTR MaLR 3 101 -278 1 1813 906 259 48 34 chrX 161077134 161077402 -5572894 + MTEa LTR MaLR 108 379 0 1 1813 34 0 0 0 chrX 161077496 161077530 -5572766 + AT_rich Low_complexity Low_complexity 1 34 0 1 1813 413 266 27 137 chrX 161077546 161077729 -5572567 - RSINE1 SINE B4 0 165 3 1 1813 241 337 86 64 chrX 161077764 161077951 -5572345 - LTR33 LTR ERVL -302 213 23 1 1813 238 312 32 11 chrX 161078280 161078374 -5571922 + Kanga2_a DNA Tc2 754 849 -39 1 1813 185 375 71 65 chrX 161078500 161078837 -5571459 - L2a LINE L2 -60 3366 3028 1 1813 436 327 178 31 chrX 161079286 161079807 -5570489 + MLT1E2 LTR MaLR 59 680 0 1 1813 737 323 159 37 chrX 161080112 161080514 -5569782 - LTR16A LTR ERVL 0 451 1 1 1813 23 0 0 0 chrX 161082191 161082214 -5568082 + AT_rich Low_complexity Low_complexity 1 23 0 1 1813 266 386 48 66 chrX 161082729 161083001 -5567295 + L2c LINE L2 3101 3367 -20 1 1813 663 92 0 0 chrX 161083262 161083349 -5566947 + L1Md_F2 LINE L1 5500 5586 -297 1 1813 8220 37 1 6 chrX 161083349 161084349 -5565947 + L1Md_F2 LINE L1 5587 6581 -1 1 1813 280 344 10 31 chrX 161084531 161084627 -5565669 + RSINE1 SINE B4 1 94 -71 1 1813 945 327 15 28 chrX 161085002 161085326 -5564970 - MER82 DNA MER2_type -25 628 309 1 1813 3445 284 75 39 chrX 161085870 161087129 -5563167 + Lx9 LINE L1 6060 7438 -206 1 1813 226 0 59 0 chrX 161087129 161087163 -5563133 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1813 2627 350 45 27 chrX 161087163 161087301 -5562995 + Lx9 LINE L1 7332 7473 0 1 1814 323 347 82 12 chrX 161087594 161087839 -5562457 - LTR90A LTR LTR -638 338 77 1 1814 404 239 97 0 chrX 161088907 161089020 -5561276 + LTR37A LTR ERV1 44 167 -259 1 1814 382 295 54 0 chrX 161089088 161089200 -5561096 + LTR75 LTR ERVL 416 533 -29 1 1814 2003 121 38 0 chrX 161089386 161089699 -5560597 - Lx2A LINE L1 -9 6999 6675 1 1814 301 286 0 90 chrX 161090005 161090105 -5560191 - MLT1F1 LTR MaLR -233 336 246 1 1814 234 346 9 61 chrX 161090168 161090282 -5560014 - MLT1F1 LTR MaLR -440 120 13 1 1814 258 224 0 0 chrX 161090744 161090802 -5559494 + Ricksha_c DNA MuDR 352 409 -1639 1 1814 28081 128 42 9 chrX 161090830 161096650 -5553646 + L1_Mus2 LINE L1 511 6458 -539 1 1814 8202 40 0 2 chrX 161096650 161097640 -5552656 + L1Md_F2 LINE L1 5587 6574 -8 1 1814 3496 221 99 102 chrX 161097640 161098101 -5552195 + L1_Mus2 LINE L1 6459 6995 -2 1 1814 430 324 115 71 chrX 161098117 161098386 -5551910 + MTEa LTR MaLR 77 357 -22 1 1814 1127 200 205 6 chrX 161099150 161099462 -5550834 + ORR1D1 LTR MaLR 1 374 0 1 1814 807 130 157 7 chrX 161099532 161099679 -5550617 - B2_Mm2 SINE B2 -21 174 6 1 1814 26 30 0 0 chrX 161100008 161100041 -5550255 + AT_rich Low_complexity Low_complexity 1 33 0 1 1814 242 357 0 82 chrX 161100313 161100435 -5549861 + ID_B1 SINE B4 113 224 0 1 1814 939 208 66 0 chrX 161101357 161101554 -5548742 - B3 SINE B2 -6 210 1 1 1814 23 54 0 0 chrX 161101738 161101775 -5548521 + AT_rich Low_complexity Low_complexity 1 37 0 1 1814 1113 285 46 44 chrX 161101876 161102372 -5547924 - L1MB8 LINE L1 -5 6173 5677 1 1814 855 155 42 0 chrX 161102383 161102525 -5547771 - B1_Mur4 SINE Alu -1 149 2 1 1814 22 56 0 0 chrX 161102738 161102774 -5547522 + AT_rich Low_complexity Low_complexity 1 36 0 1 1814 3440 32 2 0 chrX 161103450 161103860 -5546436 - L1Md_A LINE L1 -2 6580 6170 1 1814 36 70 0 0 chrX 161103930 161104001 -5546295 + AT_rich Low_complexity Low_complexity 1 71 0 1 1814 1039 67 0 0 chrX 161104266 161104400 -5545896 + B1_Mm SINE Alu 2 135 -12 1 1814 212 0 36 0 chrX 161104402 161104430 -5545866 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1814 434 181 71 0 chrX 161105299 161105426 -5544870 - Lx9 LINE L1 -1 7643 7508 1 1814 450 0 0 0 chrX 161105426 161105476 -5544820 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1814 428 284 30 0 chrX 161105999 161106133 -5544163 + L1M3 LINE L1 5626 5763 -408 1 1814 225 65 0 0 chrX 161106305 161106336 -5543960 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1814 801 273 23 0 chrX 161106340 161106512 -5543784 - B3A SINE B2 -21 177 2 1 1814 254 159 0 0 chrX 161106522 161106566 -5543730 + L1M2 LINE L1 2145 2188 -3955 1 1814 868 273 55 7 chrX 161106560 161106833 -5543463 - Lx9 LINE L1 -1108 6536 6251 1 1814 225 229 27 59 chrX 161106843 161107029 -5543267 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1 1814 244 237 33 50 chrX 161106973 161107155 -5543141 + (TATAA)n Simple_repeat Simple_repeat 2 180 0 1 1814 304 198 65 25 chrX 161107093 161107424 -5542872 + (TA)n Simple_repeat Simple_repeat 1 344 0 1 1814 1223 232 39 8 chrX 161107562 161107938 -5542358 - Lx9 LINE L1 -1682 5962 5543 1 1814 1857 301 103 25 chrX 161107940 161108737 -5541559 + Lx9 LINE L1 6514 7372 -272 1 1814 52 42 0 30 chrX 161108813 161108912 -5541384 + AT_rich Low_complexity Low_complexity 1 96 0 1 1814 2560 194 36 6 chrX 161108912 161109411 -5540885 + RMER4B LTR ERVK 72 585 0 1 1814 22 56 0 0 chrX 161109589 161109625 -5540671 + AT_rich Low_complexity Low_complexity 1 36 0 1 1814 2459 53 0 0 chrX 161109644 161109946 -5540350 - L1_Mus1 LINE L1 0 6567 6266 1 1814 932 246 109 8 chrX 161109952 161110329 -5539967 + L1M2 LINE L1 2187 2601 -3542 1 1814 1243 150 188 16 chrX 161110371 161110459 -5539837 - ORR1B1 LTR MaLR 0 394 270 1 1814 207 0 0 0 chrX 161110459 161110482 -5539814 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1814 1243 150 188 16 chrX 161110482 161110643 -5539653 - ORR1B1 LTR MaLR -125 269 102 1 1814 4239 175 62 42 chrX 161110661 161111596 -5538700 - RMER17B LTR ERVK -4 954 1 1 1814 612 209 0 0 chrX 161111596 161111702 -5538594 - ORR1B1 LTR MaLR -287 107 2 1 1814 339 25 0 0 chrX 161111712 161111752 -5538544 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1814 1208 181 5 14 chrX 161111923 161112141 -5538155 - URR1B DNA MER1_type -9 216 1 1 1814 383 318 256 21 chrX 161112142 161112713 -5537583 - L2 LINE L2 -410 3009 2305 1 1814 264 291 176 55 chrX 161114251 161114433 -5535863 + MER20 DNA MER1_type 16 219 0 1 1814 212 178 22 0 chrX 161114761 161114806 -5535490 - B4 SINE B4 -245 47 2 1 1814 756 229 52 23 chrX 161115016 161115190 -5535106 - B3 SINE B2 0 216 38 1 1814 468 239 28 42 chrX 161115222 161115366 -5534930 - B1_Mur4 SINE Alu 0 150 9 1 1814 525 44 0 0 chrX 161115988 161116056 -5534240 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 1814 769 286 225 31 chrX 161116056 161116443 -5533853 - Lx8 LINE L1 -34 7439 6971 1 1814 417 39 0 0 chrX 161116443 161116494 -5533802 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1814 769 286 225 31 chrX 161116494 161116560 -5533736 - Lx8 LINE L1 -503 6970 6898 1 1814 330 277 47 70 chrX 161116622 161116750 -5533546 - MTEa LTR MaLR -4 375 251 1 1814 204 270 13 26 chrX 161117019 161117095 -5533201 + GA-rich Low_complexity Low_complexity 4 78 0 1 1814 256 343 94 6 chrX 161117096 161117224 -5533072 - MTEa LTR MaLR -190 194 66 1 1814 312 247 10 101 chrX 161117286 161117385 -5532911 - MTEa LTR MaLR -287 92 3 1 1814 567 267 35 60 chrX 161117881 161118080 -5532216 + RMER1C Other Other 416 609 -733 1 1814 241 254 17 0 chrX 161118197 161118256 -5532040 - ORR1E LTR MaLR -2 377 318 1 1814 1658 154 49 114 chrX 161118256 161118667 -5531629 + ORR1C2 LTR MaLR 1 384 0 1 1814 296 378 53 21 chrX 161118811 161119000 -5531296 - ORR1E LTR MaLR -162 197 3 1 1814 194 136 0 22 chrX 161120611 161120656 -5529640 + A-rich Low_complexity Low_complexity 2 45 0 1 1814 459 326 26 26 chrX 161122649 161122841 -5527455 + ORR1E LTR MaLR 1 192 -167 1 1814 3265 6 0 0 chrX 161122861 161123225 -5527071 - L1Md_A LINE L1 -2 6580 6217 1 1814 5206 10 1 0 chrX 161123225 161123928 -5526368 + L1Md_A LINE L1 5503 6206 -376 1 1814 2107 185 26 3 chrX 161124033 161124418 -5525878 - ORR1B1 LTR MaLR 0 394 1 1 1814 215 265 14 56 chrX 161125236 161125308 -5524988 + GA-rich Low_complexity Low_complexity 2 70 0 1 1814 468 0 0 0 chrX 161125323 161125375 -5524921 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1814 274 336 8 50 chrX 161126044 161126163 -5524133 + PB1 SINE Alu 1 114 -13 1 1814 899 314 62 23 chrX 161126186 161126492 -5523804 + MLT1D LTR MaLR 40 357 -148 1 1814 358 206 0 0 chrX 161126506 161126574 -5523722 + MLT1D LTR MaLR 404 471 -34 1 1814 219 36 0 0 chrX 161127019 161127047 -5523249 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 1814 871 308 42 8 chrX 161127059 161127298 -5522998 - B4A SINE B4 -2 290 44 1 1814 679 280 8 13 chrX 161127300 161127484 -5522812 - B3A SINE B2 -5 211 28 1 1814 546 57 0 0 chrX 161128336 161128406 -5521890 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 1814 497 237 29 22 chrX 161128985 161129155 -5521141 + L1MA4 LINE L1 5796 5966 -334 1 1814 5897 171 86 63 chrX 161129158 161130573 -5519723 + L1_Mur3 LINE L1 3733 5190 -690 1 1814 1030 106 0 0 chrX 161130573 161130714 -5519582 - B1_Mus1 SINE Alu -5 143 3 1 1814 5897 171 86 63 chrX 161130714 161130861 -5519435 + L1_Mur3 LINE L1 5191 5331 -549 1 1814 1606 193 28 33 chrX 161130866 161131262 -5519034 - Lx2B LINE L1 -1 6999 6606 1 1814 284 161 54 0 chrX 161131268 161131324 -5518972 + L1_Mur3 LINE L1 5329 5387 -493 1 1814 4849 148 23 46 chrX 161131344 161133126 -5517170 + MusHAL1 LINE L1 220 1970 -3913 1 1814 2468 183 21 45 chrX 161133127 161134061 -5516235 - L1VL4 LINE L1 -2413 1404 512 1 1814 573 212 22 14 chrX 161134072 161134211 -5516085 + Lx6 LINE L1 7302 7441 -19 1 1814 2294 207 98 21 chrX 161134234 161134847 -5515449 - Lx7 LINE L1 -342 7354 6695 1 1814 1766 192 68 49 chrX 161135308 161135718 -5514578 + MTD LTR MaLR 2 419 0 1 1814 472 359 37 46 chrX 161136763 161137120 -5513176 - LTR16E1 LTR ERVL -45 493 83 1 1814 1630 203 41 27 chrX 161137230 161137595 -5512701 - ORR1D2 LTR MaLR 0 370 1 1 1814 974 325 78 50 chrX 161137905 161138479 -5511817 + MLT1E1A LTR MaLR 1 680 0 2 1814 845 209 200 29 chrX 161138660 161139005 -5511291 + RLTR9E LTR ERVK 6 409 0 2 1814 10088 137 5 10 chrX 161139006 161140668 -5509628 + ETnERV-int LTR ERVK 2 1655 -1659 2 1814 15293 104 21 25 chrX 161140877 161143204 -5507092 + ETnERV2-int LTR ERVK 4853 7170 -236 2 1814 772 207 254 49 chrX 161143204 161143553 -5506743 + RLTR13D6 LTR ERVK 118 537 -365 2 1814 427 82 25 76 chrX 161143553 161143632 -5506664 + ETnERV2-int LTR ERVK 7329 7403 -3 2 1814 805 208 185 55 chrX 161143634 161143996 -5506300 + RLTR9E LTR ERVK 1 409 0 2 1814 5219 169 21 28 chrX 161144265 161145572 -5504724 + L1Md_T LINE L1 99 1205 -5411 2 1814 34706 32 0 0 chrX 161145578 161149994 -5500302 + L1Md_T LINE L1 1170 5586 -297 2 1814 8023 56 0 0 chrX 161149994 161150990 -5499306 + L1Md_T LINE L1 5587 6582 0 2 1814 180 0 0 0 chrX 161151002 161151022 -5499274 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1814 252 346 39 0 chrX 161151276 161151372 -5498924 - MER5A DNA MER1_type 0 189 90 2 1814 265 252 21 29 chrX 161151372 161151486 -5498810 - MLT1A1 LTR MaLR 0 408 287 2 1814 280 245 95 86 chrX 161151712 161151828 -5498468 - MER5A DNA MER1_type -72 117 1 2 1814 265 191 0 0 chrX 161151828 161151870 -5498426 - 5S rRNA rRNA -79 42 1 2 1814 784 78 31 0 chrX 161152223 161152351 -5497945 + (TTATG)n Simple_repeat Simple_repeat 1 132 0 2 1814 778 303 23 0 chrX 161152355 161152530 -5497766 + B3A SINE B2 13 191 -7 2 1814 2320 90 3 3 chrX 161152540 161152863 -5497433 - L1_Mus1 LINE L1 0 6567 6245 2 1814 20602 101 13 12 chrX 161152863 161156274 -5494022 - L1_Mus1 LINE L1 -490 6077 2675 2 1814 2930 223 89 23 chrX 161156280 161156669 -5493627 + Lx6 LINE L1 6468 6910 -550 2 1814 531 0 0 0 chrX 161156669 161156728 -5493568 + (GA)n Simple_repeat Simple_repeat 1 59 0 2 1814 2930 223 89 23 chrX 161156728 161157089 -5493207 + Lx6 LINE L1 6911 7267 -193 2 1814 1864 306 49 64 chrX 161157130 161157647 -5492649 - Lx5 LINE L1 -24 7026 6530 2 1814 627 14 0 0 chrX 161157647 161157719 -5492577 + (TTCC)n Simple_repeat Simple_repeat 3 74 0 2 1814 1864 306 49 64 chrX 161157719 161158101 -5492195 - Lx5 LINE L1 -521 6529 6141 2 1814 757 278 0 0 chrX 161158105 161158296 -5492000 + Lx6 LINE L1 7262 7452 -8 2 1814 1386 266 52 16 chrX 161158296 161158742 -5491554 - MER99 DNA hAT? -249 582 121 2 1814 2350 160 13 3 chrX 161159231 161159613 -5490683 + ORR1B1 LTR MaLR 1 386 -8 2 1814 285 70 0 23 chrX 161159617 161159661 -5490635 + ORR1B1-int LTR MaLR 1 43 -1466 2 1814 3248 149 47 33 chrX 161159658 161160331 -5489965 + ORR1B1-int LTR MaLR 930 1950 -13 2 1814 892 292 95 24 chrX 161160820 161161569 -5488727 + Lx8 LINE L1 5616 6442 -1031 2 1814 1007 271 114 0 chrX 161162067 161162428 -5487868 + Lx8 LINE L1 6446 6847 -626 2 1814 20350 161 43 9 chrX 161162439 161167261 -5483035 - Lx5 LINE L1 -5 7045 2058 2 1814 225 94 0 0 chrX 161167261 161167293 -5483003 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1814 7338 159 55 4 chrX 161167293 161167552 -5482744 - Lx5 LINE L1 -3820 2057 1791 2 1814 373 219 23 47 chrX 161167552 161167681 -5482615 - Lx5 LINE L1 -6072 1014 889 2 1814 1138 222 19 0 chrX 161168004 161168211 -5482085 + B3 SINE B2 1 211 -5 2 1814 254 176 29 14 chrX 161168246 161168315 -5481981 + A-rich Low_complexity Low_complexity 3 72 0 2 1814 708 257 35 18 chrX 161168475 161168645 -5481651 + B3 SINE B2 2 174 -42 2 1814 577 211 32 37 chrX 161168664 161168740 -5481556 + Lx7 LINE L1 6041 6118 -1578 2 1814 3263 51 0 14 chrX 161168740 161169161 -5481135 - L1Md_F2 LINE L1 0 6582 6168 2 1814 577 211 32 37 chrX 161169161 161169271 -5481025 + Lx7 LINE L1 6119 6226 -1470 2 1814 736 103 40 0 chrX 161169276 161169402 -5480894 + L1_Mus1 LINE L1 6437 6567 0 2 1814 379 305 83 23 chrX 161169514 161170135 -5480161 + L1M2 LINE L1 2280 2942 -4002 2 1814 237 325 24 35 chrX 161170144 161170313 -5479983 + L1M2 LINE L1 3365 3531 -3314 2 1814 227 288 61 0 chrX 161170330 161170396 -5479900 + B4A SINE B4 79 148 -144 2 1814 327 239 15 0 chrX 161170340 161170407 -5479889 + B1F SINE Alu 8 75 -74 2 1814 1701 272 52 6 chrX 161170421 161170916 -5479380 + Lx8 LINE L1 6188 6705 -768 2 1814 304 213 21 21 chrX 161170916 161171012 -5479284 + L1MA7 LINE L1 6179 6274 -17 2 1814 3057 88 21 2 chrX 161171207 161171641 -5478655 - L1_Mus4 LINE L1 -7 6629 6188 2 1814 1445 84 23 0 chrX 161171641 161171855 -5478441 + L1_Mus4 LINE L1 5929 6147 -489 2 1814 585 302 125 0 chrX 161172606 161172854 -5477442 + Lx8 LINE L1 7189 7467 -6 2 1814 3621 206 33 12 chrX 161172879 161173946 -5476350 - Lx6 LINE L1 -926 6534 5431 2 1814 2400 51 69 6 chrX 161173952 161174299 -5475997 - L1Md_F2 LINE L1 0 6582 6227 2 1814 822 56 0 0 chrX 161174299 161174406 -5475890 + L1Md_F2 LINE L1 6132 6238 -344 2 1814 2030 214 16 58 chrX 161174400 161174886 -5475410 + Lx6 LINE L1 6527 6992 -468 2 1814 284 0 28 0 chrX 161175747 161175783 -5474513 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1814 746 249 59 25 chrX 161176655 161176891 -5473405 + MTD LTR MaLR 1 255 -166 2 1814 3530 66 10 2 chrX 161176891 161177389 -5472907 + Lx LINE L1 5615 6116 -538 2 1814 2006 119 34 6 chrX 161177389 161177711 -5472585 + Lx LINE L1 6323 6653 -1 2 1814 661 249 105 11 chrX 161177711 161177902 -5472394 + MTD LTR MaLR 211 419 0 2 1814 3148 56 2 10 chrX 161178097 161178496 -5471800 - MTA_Mm LTR MaLR 0 396 1 2 1814 327 200 0 31 chrX 161178817 161178915 -5471381 + Lx6 LINE L1 7340 7434 -26 2 1814 360 335 88 35 chrX 161179136 161179362 -5470934 + LTR16A1 LTR ERVL 205 442 -14 2 1814 249 33 0 0 chrX 161179453 161179483 -5470813 + (CG)n Simple_repeat Simple_repeat 2 31 0 2 1814 414 0 0 0 chrX 161179483 161179528 -5470768 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1814 533 289 78 119 chrX 161179731 161179905 -5470391 + MER58B DNA MER1_type 11 190 -151 2 1814 314 300 0 0 chrX 161179905 161179985 -5470311 - ID4 SINE ID -1 82 3 2 1814 533 289 78 119 chrX 161179985 161180155 -5470141 + MER58B DNA MER1_type 191 341 0 2 1814 1335 270 24 34 chrX 161180886 161181269 -5469027 + MTEa LTR MaLR 1 379 0 2 1814 1772 228 69 3 chrX 161181628 161182020 -5468276 - MTD LTR MaLR -1 418 1 2 1814 25 0 0 0 chrX 161182648 161182673 -5467623 + AT_rich Low_complexity Low_complexity 1 25 0 2 1814 449 333 115 19 chrX 161182691 161182899 -5467397 - MER63B DNA AcHobo -46 390 163 2 1814 1194 289 45 72 chrX 161183098 161183734 -5466562 + MT2A LTR ERVL 5 525 -8 2 1814 208 232 83 42 chrX 161184336 161184408 -5465888 - L3 LINE CR1 -1892 2597 2523 2 1814 534 271 117 78 chrX 161184614 161184925 -5465371 + ORR1E LTR MaLR 3 379 0 2 1814 273 384 66 22 chrX 161185264 161185445 -5464851 - Lx8 LINE L1 -148 7325 7137 2 1814 771 345 58 21 chrX 161185556 161186091 -5464205 - Lx8 LINE L1 -2 7471 6917 2 1814 1311 258 119 18 chrX 161186080 161186515 -5463781 + Lx6 LINE L1 6956 7434 -26 2 1814 28 0 0 0 chrX 161186533 161186561 -5463735 + AT_rich Low_complexity Low_complexity 1 28 0 2 1814 255 252 104 14 chrX 161186570 161186710 -5463586 + L1M1 LINE L1 5283 5437 -875 2 1814 266 294 0 0 chrX 161186717 161186785 -5463511 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 2 1814 433 347 120 20 chrX 161186805 161187416 -5462880 + L1MB8 LINE L1 5438 6109 -69 2 1814 1021 190 25 30 chrX 161187474 161187675 -5462621 - B3 SINE B2 -14 202 3 2 1814 846 214 125 0 chrX 161187685 161187877 -5462419 - B3 SINE B2 0 216 1 2 1814 26 74 0 0 chrX 161188158 161188212 -5462084 + AT_rich Low_complexity Low_complexity 1 54 0 2 1814 36102 16 1 7 chrX 161188310 161193518 -5456778 + L1Md_A LINE L1 412 5585 -298 2 1814 8773 17 0 0 chrX 161193519 161194515 -5455781 + L1Md_A LINE L1 5587 6582 0 2 1814 372 307 146 0 chrX 161194694 161194831 -5455465 - RSINE1 SINE B4 -6 159 3 2 1814 3038 43 3 0 chrX 161195332 161195705 -5454591 - L1Md_T LINE L1 0 6582 6209 2 1814 198 191 0 0 chrX 161195885 161195932 -5454364 + T-rich Low_complexity Low_complexity 1 47 0 2 1814 270 75 0 0 chrX 161195940 161195993 -5454303 - L1Md_F2 LINE L1 -1 6581 6529 2 1814 2974 56 0 8 chrX 161195992 161196389 -5453907 + L1Md_F2 LINE L1 5625 6018 -564 2 1814 320 230 17 50 chrX 161197086 161197205 -5453091 - L1MA8 LINE L1 -2 6289 6175 2 1814 22 0 0 0 chrX 161197313 161197335 -5452961 + AT_rich Low_complexity Low_complexity 1 22 0 2 1814 37 52 0 0 chrX 161197484 161197542 -5452754 + AT_rich Low_complexity Low_complexity 1 58 0 2 1814 2640 184 61 59 chrX 161197554 161198160 -5452136 - Lx5 LINE L1 -3 7047 6441 2 1814 1486 276 68 41 chrX 161198175 161199193 -5451103 - L1MA8 LINE L1 -202 6089 5047 2 1814 378 265 64 76 chrX 161199206 161199437 -5450859 + ORR1D1 LTR MaLR 9 250 -120 2 1814 4604 120 41 0 chrX 161199445 161200128 -5450168 + RMER19A LTR ERVK 27 737 0 2 1814 443 294 24 9 chrX 161201276 161201489 -5448807 + L1ME2 LINE L1 5697 5912 -252 2 1814 22 0 0 0 chrX 161202827 161202849 -5447447 + AT_rich Low_complexity Low_complexity 1 22 0 2 1814 384 22 0 0 chrX 161204085 161204130 -5446166 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1814 434 345 57 4 chrX 161204426 161204656 -5445640 + Lx8 LINE L1 6773 7014 -459 2 1814 464 332 77 34 chrX 161204766 161204955 -5445341 + Lx8 LINE L1 7002 7208 -265 2 1814 2892 62 5 3 chrX 161204955 161205330 -5444966 - L1_Mus3 LINE L1 0 6638 6263 2 1814 464 332 77 34 chrX 161205330 161205489 -5444807 + Lx8 LINE L1 7209 7365 -108 2 1814 318 50 0 0 chrX 161205905 161205945 -5444351 + (TC)n Simple_repeat Simple_repeat 2 41 0 2 1814 324 0 0 0 chrX 161205947 161205983 -5444313 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1814 537 16 0 0 chrX 161206623 161206685 -5443611 + (TA)n Simple_repeat Simple_repeat 1 62 0 2 1814 246 256 65 32 chrX 161206802 161206895 -5443401 - Cheshire DNA MER1_type -2145 275 180 2 1814 2899 9 0 0 chrX 161207244 161207566 -5442730 - RLTRETN_Mm LTR ERVK 0 322 1 2 1814 206 298 179 32 chrX 161207745 161207905 -5442391 - MIRb SINE MIR -68 200 14 2 1814 5381 122 39 7 chrX 161208558 161209197 -5441099 + L1VL4 LINE L1 59 731 -5571 2 1814 1622 96 22 4 chrX 161209197 161209428 -5440868 + L1_Mus1 LINE L1 6333 6567 0 2 1814 5381 104 29 4 chrX 161209428 161209926 -5440370 + L1VL4 LINE L1 732 1235 -2324 2 1814 10694 73 6 2 chrX 161209926 161212373 -5437923 + L1Md_F2 LINE L1 311 2767 -3116 2 1814 12907 60 3 5 chrX 161212357 161214121 -5436175 + L1Md_F2 LINE L1 3827 5586 -297 2 1814 7973 50 3 1 chrX 161214121 161215103 -5435193 + L1Md_F2 LINE L1 5587 6570 -12 2 1814 21229 162 11 35 chrX 161215111 161217050 -5433246 + L1_Mus4 LINE L1 1589 3481 -2402 2 1814 2008 61 82 36 chrX 161217050 161217356 -5432940 + L1_Mus2 LINE L1 6247 6566 0 2 226 21229 162 11 35 chrX 161217356 161218649 -5431647 + L1_Mus4 LINE L1 3482 4733 -1150 2 1815 294 29 0 0 chrX 161218649 161218684 -5431612 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1815 21229 112 21 27 chrX 161218684 161220585 -5429711 + L1_Mus4 LINE L1 4734 6631 -5 2 1815 207 0 0 0 chrX 161221262 161221285 -5429011 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1815 749 259 34 29 chrX 161221327 161221534 -5428762 - B3 SINE B2 -6 210 3 2 1815 685 286 28 0 chrX 161221935 161222113 -5428183 + B3A SINE B2 1 183 -15 2 1815 462 88 0 0 chrX 161222143 161222211 -5428085 + (CA)n Simple_repeat Simple_repeat 1 68 0 2 1815 309 338 44 22 chrX 161223295 161223431 -5426865 - Lx8 LINE L1 -201 7272 7134 2 1815 643 262 12 0 chrX 161223442 161223610 -5426686 - Lx8 LINE L1 -952 6521 6352 2 1815 626 336 23 0 chrX 161223755 161223969 -5426327 - ID_B1 SINE B4 -1 223 5 2 1815 646 252 101 45 chrX 161224133 161224469 -5425827 - Charlie7 DNA MER1_type -711 1901 1547 2 1815 1318 196 6 38 chrX 161224545 161224877 -5425419 + Lx2B LINE L1 6610 6946 -30 2 1815 288 0 0 0 chrX 161224974 161225006 -5425290 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 3 1815 27 0 0 0 chrX 161225006 161225033 -5425263 + AT_rich Low_complexity Low_complexity 1 27 0 3 1815 499 328 92 51 chrX 161225221 161225494 -5424802 + LTR33 LTR ERVL 10 293 -222 3 1815 253 324 39 19 chrX 161225530 161225634 -5424662 + LTR33 LTR ERVL 410 515 0 3 1815 405 0 0 0 chrX 161226288 161226333 -5423963 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 1815 180 0 0 0 chrX 161226951 161226971 -5423325 + (CA)n Simple_repeat Simple_repeat 2 21 0 3 1815 23 0 0 0 chrX 161226987 161227010 -5423286 + AT_rich Low_complexity Low_complexity 1 23 0 3 1815 189 0 0 0 chrX 161228688 161228709 -5421587 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1815 428 191 11 0 chrX 161228709 161228803 -5421493 + (TATG)n Simple_repeat Simple_repeat 2 96 0 3 1815 9177 22 0 7 chrX 161229727 161229766 -5420530 + L1Md_T LINE L1 4465 4503 -1380 3 1815 2315 75 119 11 chrX 161229766 161230118 -5420178 + RLTR10 LTR ERVK 1 390 0 3 1815 9177 22 0 7 chrX 161230118 161231208 -5419088 + L1Md_T LINE L1 4504 5586 -297 3 1815 8465 31 0 3 chrX 161231208 161232205 -5418091 + L1Md_T LINE L1 5587 6580 -2 3 1815 929 328 109 30 chrX 161232300 161232922 -5417374 - LTR50 LTR ERVL -1 519 1 3 1815 24 0 0 0 chrX 161233732 161233756 -5416540 + AT_rich Low_complexity Low_complexity 1 24 0 3 1815 641 257 34 17 chrX 161233773 161233951 -5416345 - B3A SINE B2 -16 182 2 3 1815 571 355 30 0 chrX 161234084 161234281 -5416015 + MER58A DNA MER1_type 22 224 0 3 1815 923 162 193 11 chrX 161234959 161235140 -5415156 + B3 SINE B2 3 216 0 3 1815 646 218 66 22 chrX 161235829 161236012 -5414284 + MER53 DNA hAT 2 192 -1 3 1815 348 331 64 52 chrX 161236573 161236745 -5413551 + MER58A DNA MER1_type 23 196 -28 3 1815 325 318 154 95 chrX 161236758 161237220 -5413076 + MLT1C LTR MaLR 17 505 0 3 1815 23 0 0 0 chrX 161237555 161237578 -5412718 + AT_rich Low_complexity Low_complexity 1 23 0 3 1815 220 140 23 23 chrX 161237793 161237837 -5412459 + GA-rich Low_complexity Low_complexity 3 46 0 3 1815 550 291 0 0 chrX 161238989 161239099 -5411197 - PB1D10 SINE Alu -6 111 2 3 1815 1141 75 0 0 chrX 161239382 161239528 -5410768 - B1_Mus1 SINE Alu -1 147 2 3 1815 400 339 35 23 chrX 161239652 161239909 -5410387 - L1ME3 LINE L1 -174 5988 5729 3 1815 434 350 114 27 chrX 161240390 161240610 -5409686 + Charlie10b DNA MER1_type 3 241 -1 3 1815 262 363 26 23 chrX 161240988 161241132 -5409164 + L2b LINE L2 3204 3375 -12 3 1815 3151 96 150 15 chrX 161241470 161242010 -5408286 - L1_Mus3 LINE L1 -3 6635 6023 3 1815 467 372 47 33 chrX 161242549 161242824 -5407472 + RMER15 LTR ERVL 294 572 -3 3 1815 244 275 131 72 chrX 161242824 161242977 -5407319 + ORR1E LTR MaLR 23 184 -175 3 1815 474 293 41 0 chrX 161243064 161243187 -5407109 - ID_B1 SINE B4 -11 213 86 3 1815 1450 75 0 5 chrX 161243423 161243612 -5406684 - B2_Mm2 SINE B2 -7 188 1 3 1815 919 386 58 12 chrX 161244331 161244761 -5405535 + LTR16A1 LTR ERVL 7 456 0 3 1815 291 114 0 0 chrX 161245875 161245919 -5404377 + (CAT)n Simple_repeat Simple_repeat 1 44 0 3 1815 471 235 128 8 chrX 161245945 161246079 -5404217 - B1F SINE Alu 0 150 1 3 1815 417 298 52 67 chrX 161246347 161246541 -5403755 - MER92B LTR ERV1 0 636 446 3 1815 465 286 80 36 chrX 161246528 161246666 -5403630 + ID_B1 SINE B4 78 221 -3 3 1815 3861 122 22 5 chrX 161246710 161247309 -5402987 - L1_Mus4 LINE L1 -4 6632 6024 3 1815 7260 68 9 0 chrX 161247348 161248406 -5401890 + L1_Mus2 LINE L1 5500 6565 -1 3 1815 183 42 0 0 chrX 161248415 161248439 -5401857 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1815 1083 100 0 0 chrX 161248443 161248613 -5401683 - Lx2 LINE L1 -654 6343 6174 3 1815 255 319 32 48 chrX 161248647 161248772 -5401524 - Lx8 LINE L1 -1068 6405 6283 3 1815 341 314 9 0 chrX 161248800 161248905 -5401391 + Lx7 LINE L1 6800 6905 -791 3 1815 1655 218 10 60 chrX 161248912 161249126 -5401170 - ORR1D1 LTR MaLR -7 367 166 3 1815 540 45 0 0 chrX 161249126 161249193 -5401103 + (GA)n Simple_repeat Simple_repeat 1 67 0 3 1815 1655 218 10 60 chrX 161249193 161249364 -5400932 - ORR1D1 LTR MaLR -209 165 1 3 1815 1146 69 14 0 chrX 161249707 161249852 -5400444 - B1_Mus2 SINE Alu 0 147 1 3 1815 539 298 15 30 chrX 161249882 161250083 -5400213 + B3A SINE B2 1 198 0 3 1815 585 262 33 89 chrX 161250173 161250533 -5399763 + L1VL1 LINE L1 61 400 -6022 3 1815 12055 95 5 16 chrX 161250575 161252452 -5397844 + L1_Mm LINE L1 2535 4389 -1494 3 1815 552 219 290 53 chrX 161252513 161252889 -5397407 - RMER21B LTR ERV1 -377 465 1 3 1815 426 101 0 0 chrX 161253186 161253255 -5397041 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 1815 377 235 16 70 chrX 161253778 161253906 -5396390 + L1MA8 LINE L1 5920 6040 -251 3 1815 402 306 139 23 chrX 161253908 161254166 -5396130 + B4A SINE B4 1 288 -4 3 1815 320 227 92 102 chrX 161254253 161254449 -5395847 + L1MA7 LINE L1 6033 6226 -65 3 1815 358 313 119 7 chrX 161254749 161254900 -5395396 + MER5B DNA MER1_type 7 174 -4 3 1815 1082 76 0 7 chrX 161254905 161255038 -5395258 + B1_Mus1 SINE Alu 5 137 -11 3 1815 922 67 7 15 chrX 161255038 161255174 -5395122 + (GAAA)n Simple_repeat Simple_repeat 2 136 0 3 1815 1082 76 0 7 chrX 161255174 161255185 -5395111 + B1_Mus1 SINE Alu 138 148 0 3 1815 1768 232 51 20 chrX 161255602 161255994 -5394302 + MTD LTR MaLR 16 419 0 3 1815 298 318 111 44 chrX 161256156 161256291 -5394005 + MER5A DNA MER1_type 1 144 -45 3 1815 3975 86 5 33 chrX 161256677 161257254 -5393042 - L1_Mus2 LINE L1 0 6566 6006 3 1815 2509 50 9 0 chrX 161257254 161257591 -5392705 + L1_Mus2 LINE L1 5669 6008 -558 3 1815 192 152 0 0 chrX 161258226 161258259 -5392037 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1815 1036 143 6 0 chrX 161258492 161258660 -5391636 + URR1A DNA MER1_type 58 226 0 3 1815 23 78 0 0 chrX 161258681 161258732 -5391564 + AT_rich Low_complexity Low_complexity 1 51 0 3 1815 288 0 0 0 chrX 161259488 161259520 -5390776 + (TC)n Simple_repeat Simple_repeat 2 33 0 3 1815 270 0 0 0 chrX 161259520 161259549 -5390747 + (TA)n Simple_repeat Simple_repeat 1 30 0 3 1815 261 0 0 0 chrX 161259549 161259577 -5390719 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 1815 1570 164 11 4 chrX 161259577 161259840 -5390456 - ORR1A2 LTR MaLR -62 265 1 3 1815 336 221 13 25 chrX 161259840 161259908 -5390388 + ORR1C1 LTR MaLR 304 370 -8 3 1815 229 336 89 57 chrX 161260054 161260177 -5390119 + MER63B DNA AcHobo 310 436 0 3 1815 1023 255 58 8 chrX 161260184 161260441 -5389855 + MTEa LTR MaLR 3 272 -107 3 1815 217 366 34 85 chrX 161260520 161260696 -5389600 - L2c LINE L2 -163 3224 3058 3 1815 297 266 16 0 chrX 161260719 161260783 -5389513 + ID4 SINE ID 2 66 -17 3 1815 639 245 151 25 chrX 161261013 161261291 -5389005 + LTR37A LTR ERV1 107 421 -5 3 1815 2192 137 0 29 chrX 161261291 161261668 -5388628 + L1_Mus4 LINE L1 6264 6629 -7 3 1815 801 333 11 32 chrX 161261697 161261982 -5388314 + B4A SINE B4 12 290 -2 3 1815 180 77 0 0 chrX 161262015 161262041 -5388255 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 1815 27 49 0 0 chrX 161262126 161262167 -5388129 + AT_rich Low_complexity Low_complexity 1 41 0 3 1815 387 141 0 0 chrX 161262409 161262473 -5387823 + (A)n Simple_repeat Simple_repeat 1 64 0 3 1815 518 332 117 62 chrX 161263518 161263903 -5386393 - MLT1K LTR MaLR -4 591 186 3 1815 306 0 0 0 chrX 161264035 161264069 -5386227 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1815 210 408 19 19 chrX 161265087 161265247 -5385049 + MER5B DNA MER1_type 2 161 -17 3 1815 667 297 0 40 chrX 161265455 161265655 -5384641 + B3A SINE B2 1 192 -6 3 1815 612 298 91 9 chrX 161265717 161265937 -5384359 - Tigger5 DNA MER2_type -2168 238 1 3 1815 2629 211 31 20 chrX 161266009 161266594 -5383702 - Lx4B LINE L1 -4 7054 6464 3 1815 238 149 53 107 chrX 161266620 161266695 -5383601 - RMER20A LTR ERVK -268 248 178 3 1815 5311 123 19 38 chrX 161266695 161266990 -5383306 + L1_Mus3 LINE L1 4943 5236 -647 3 1815 314 107 18 0 chrX 161266990 161267046 -5383250 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 1815 7026 104 20 36 chrX 161267046 161267590 -5382706 + L1_Mus3 LINE L1 5237 5788 -850 3 1815 1077 103 7 0 chrX 161267590 161267736 -5382560 + B1_Mus1 SINE Alu 2 148 0 3 1815 7026 73 22 32 chrX 161267736 161268588 -5381708 + L1_Mus3 LINE L1 5789 6632 -6 3 1815 2371 196 45 23 chrX 161268586 161269102 -5381194 - Lx5 LINE L1 -595 6455 5929 3 1815 5213 155 27 13 chrX 161269120 161270119 -5380177 - Lx5 LINE L1 -47 5830 4818 3 1815 8704 154 18 15 chrX 161270124 161272205 -5378091 - Lx5 LINE L1 -2875 3002 915 3 1815 720 308 5 36 chrX 161272502 161272694 -5377602 - B3A SINE B2 -6 192 7 3 1815 612 312 71 25 chrX 161273000 161273283 -5377013 - MER77 LTR ERVL -3 604 309 3 1815 277 301 7 136 chrX 161273300 161273454 -5376842 - B1_Mur2 SINE Alu -11 138 5 3 1815 27 29 0 0 chrX 161273483 161273517 -5376779 + AT_rich Low_complexity Low_complexity 1 34 0 3 1815 270 276 141 68 chrX 161273542 161273705 -5376591 - RLTR25B LTR ERVK 0 1103 929 3 1815 458 333 112 5 chrX 161274587 161274792 -5375504 - RLTR25B LTR ERVK -801 227 1 3 1815 489 346 50 29 chrX 161274837 161275114 -5375182 - B4 SINE B4 -7 285 3 3 1815 559 302 106 26 chrX 161275404 161275669 -5374627 + B4A SINE B4 1 286 -6 3 1815 244 211 22 11 chrX 161275675 161275766 -5374530 + (CATA)n Simple_repeat Simple_repeat 1 92 0 3 1815 475 271 0 0 chrX 161276948 161277044 -5373252 + B3A SINE B2 1 96 -102 3 1815 460 140 21 0 chrX 161277044 161277137 -5373159 + CT-rich Low_complexity Low_complexity 2 96 0 3 1815 463 282 20 15 chrX 161277165 161277363 -5372933 + L1MC4a LINE L1 5717 5915 -1967 3 1815 345 292 10 20 chrX 161277445 161277543 -5372753 + B4A SINE B4 2 98 -194 3 1815 2253 102 6 18 chrX 161277546 161277842 -5372454 - ORR1A2 LTR MaLR 0 327 35 3 1815 3065 67 2 19 chrX 161277842 161278256 -5372040 + MTB_Mm LTR MaLR 1 407 0 4 1815 2253 102 6 18 chrX 161278256 161278290 -5372006 - ORR1A2 LTR MaLR -293 34 1 3 1815 276 189 0 19 chrX 161278339 161278393 -5371903 + B4 SINE B4 166 218 -74 4 1815 4141 146 62 55 chrX 161278486 161279308 -5370988 - RMER21B LTR ERV1 -14 828 1 4 1815 482 310 95 15 chrX 161279316 161279516 -5370780 - MLT1D LTR MaLR -79 426 211 4 1815 630 0 0 0 chrX 161280195 161280265 -5370031 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 4 1815 702 331 70 18 chrX 161280470 161280799 -5369497 - MLT1A0 LTR MaLR -19 346 1 4 1815 332 373 25 19 chrX 161280829 161280890 -5369406 - LTR16E2 LTR ERVL -97 471 412 4 1815 2049 111 65 0 chrX 161280890 161281197 -5369099 + ORR1A2 LTR MaLR 1 327 0 4 1815 332 373 25 19 chrX 161281197 161281296 -5369000 - LTR16E2 LTR ERVL -157 411 310 4 1815 286 282 230 16 chrX 161282121 161282247 -5368049 - MLT1A0 LTR MaLR -2 363 211 4 1815 282 343 136 55 chrX 161282416 161282755 -5367541 - LTR16E2 LTR ERVL -4 564 106 4 1815 364 300 17 52 chrX 161282755 161282871 -5367425 + PB1D7 SINE Alu 3 114 -6 4 1815 332 292 106 53 chrX 161282912 161283100 -5367196 + B3A SINE B2 1 198 0 4 1815 494 336 21 8 chrX 161283310 161283542 -5366754 - MLT2B1 LTR ERVL -23 531 284 4 1815 419 241 36 18 chrX 161283592 161283702 -5366594 - RMER15 LTR ERVL -36 539 428 4 1815 261 338 119 8 chrX 161283956 161284090 -5366206 - MLT2B1 LTR ERVL -333 187 39 4 1815 960 290 106 19 chrX 161284673 161285052 -5365244 - Kanga1 DNA Tc2 -945 800 389 4 1815 231 243 76 93 chrX 161285216 161285334 -5364962 - RMER1C Other Other -4 1338 1223 4 1815 1168 61 0 0 chrX 161285365 161285512 -5364784 + B1_Mus1 SINE Alu 2 148 0 4 1815 252 0 0 0 chrX 161285512 161285540 -5364756 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1815 2142 309 81 21 chrX 161285544 161286485 -5363811 - Lx8 LINE L1 -147 7326 6330 4 1815 565 284 157 20 chrX 161286629 161287073 -5363223 - L1MB8 LINE L1 -93 6085 5581 4 1815 2386 92 0 3 chrX 161287165 161287504 -5362792 + L1_Mus1 LINE L1 6166 6503 -64 4 1815 618 209 7 0 chrX 161288124 161288251 -5362045 - B1_Mur1 SINE Alu -14 136 2 4 1815 363 266 70 8 chrX 161288381 161288510 -5361786 - MTD LTR MaLR 0 419 283 4 1815 1202 196 10 0 chrX 161288521 161288730 -5361566 + URR1A DNA MER1_type 1 211 -15 4 1815 4613 113 62 0 chrX 161288726 161289415 -5360881 + RMER19A LTR ERVK 6 737 0 4 1815 839 275 12 49 chrX 161289452 161289697 -5360599 - MTD LTR MaLR -166 253 18 4 1815 284 376 45 83 chrX 161290992 161291282 -5359014 + LTR16C LTR ERVL 148 426 -63 4 1815 337 37 36 18 chrX 161291282 161291337 -5358959 + (CAAAA)n Simple_repeat Simple_repeat 5 60 0 4 1815 4423 67 10 15 chrX 161291780 161292505 -5357791 + RLTR13A LTR ERVK 1 861 -97 4 1815 232 304 0 0 chrX 161293080 161293136 -5357160 + polypyrimidine Low_complexity Low_complexity 4 59 0 4 1815 231 88 0 0 chrX 161293147 161293181 -5357115 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 4 1815 404 295 21 64 chrX 161293181 161293322 -5356974 - B1F SINE Alu -10 139 5 4 1815 265 360 71 32 chrX 161293575 161293730 -5356566 + MLT1B LTR MaLR 1 161 -229 4 1815 780 245 24 24 chrX 161293738 161293947 -5356349 - B3 SINE B2 -6 210 2 4 1815 635 262 49 69 chrX 161293949 161294195 -5356101 + MLT1B LTR MaLR 147 387 -3 4 1815 1156 68 7 0 chrX 161294631 161294777 -5355519 - B1_Mus1 SINE Alu 0 148 2 4 1815 21 36 0 0 chrX 161294943 161294971 -5355325 + AT_rich Low_complexity Low_complexity 1 28 0 4 1815 300 367 9 18 chrX 161295872 161295983 -5354313 - MER81 DNA AcHobo -4 110 1 4 1815 303 260 60 45 chrX 161295990 161296123 -5354173 + LTR16A LTR ERVL 290 424 -27 4 1815 272 295 10 10 chrX 161296501 161296597 -5353699 + CT-rich Low_complexity Low_complexity 4 99 0 4 1815 258 241 33 41 chrX 161297109 161297230 -5353066 + L1MB2 LINE L1 6030 6149 -22 4 1815 385 348 27 30 chrX 161297261 161297463 -5352833 - MLT1A1 LTR MaLR -58 350 115 4 1815 232 159 0 120 chrX 161297901 161297951 -5352345 - ID4 SINE ID -28 55 12 4 1815 658 269 104 0 chrX 161298018 161298219 -5352077 - ID_B1 SINE B4 -2 222 1 4 1815 379 331 7 0 chrX 161298339 161298487 -5351809 + Lx9 LINE L1 6846 6994 -650 4 1815 459 0 0 0 chrX 161298593 161298644 -5351652 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 1815 459 0 0 0 chrX 161298644 161298694 -5351602 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1815 1324 282 27 48 chrX 161298695 161299213 -5351083 + Lx9 LINE L1 6983 7489 -155 4 1815 338 296 151 51 chrX 161299509 161299828 -5350468 - HAL1 LINE L1 -98 2409 2059 4 1815 249 350 12 0 chrX 161300008 161300088 -5350208 - ID4 SINE ID 0 83 3 4 1815 307 336 132 7 chrX 161300277 161300421 -5349875 - HAL1 LINE L1 -882 1625 1464 4 1815 463 84 14 0 chrX 161300654 161300725 -5349571 - L1_Mm LINE L1 -1945 3938 3867 4 1815 5887 78 0 0 chrX 161300725 161301486 -5348810 + L1_Mus1 LINE L1 5806 6566 -1 4 1815 23 0 0 0 chrX 161301486 161301509 -5348787 + AT_rich Low_complexity Low_complexity 1 23 0 4 1815 7105 61 20 4 chrX 161301841 161302803 -5347493 - L1_Mus1 LINE L1 0 6567 5591 4 1815 732 109 0 0 chrX 161302808 161302927 -5347369 + L1VL4 LINE L1 749 867 -5435 4 1815 1791 85 4 23 chrX 161303192 161303457 -5346839 + L1_Mus1 LINE L1 6306 6565 -2 4 1815 3563 53 0 0 chrX 161304681 161305136 -5345160 - L1Md_F2 LINE L1 -186 5697 5243 4 1815 6721 66 16 6 chrX 161305136 161306018 -5344278 + L1Md_F2 LINE L1 5687 6577 -5 4 1815 201 147 0 0 chrX 161306573 161306607 -5343689 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1815 312 27 0 0 chrX 161306628 161306665 -5343631 + (TATG)n Simple_repeat Simple_repeat 2 38 0 4 1815 295 331 92 167 chrX 161306687 161306764 -5343532 - B4A SINE B4 -18 274 212 4 1815 667 270 58 16 chrX 161306764 161306952 -5343344 - B3A SINE B2 -2 196 1 4 1815 295 331 92 167 chrX 161306952 161307073 -5343223 - B4A SINE B4 -81 211 85 4 1815 477 0 0 0 chrX 161307073 161307126 -5343170 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 1815 471 35 0 0 chrX 161307126 161307182 -5343114 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1815 295 331 92 167 chrX 161307182 161307275 -5343021 - B4A SINE B4 -208 84 4 4 1815 2992 73 29 10 chrX 161307420 161307833 -5342463 - BGLII LTR ERVK 0 421 1 4 1815 531 92 0 0 chrX 161308855 161308942 -5341354 + (GA)n Simple_repeat Simple_repeat 1 87 0 4 1815 1309 32 0 0 chrX 161309235 161309391 -5340905 - L1Md_F2 LINE L1 -353 6229 6074 4 1815 2259 68 45 13 chrX 161309391 161309705 -5340591 + L1Md_F2 LINE L1 6247 6570 -12 4 1815 27 49 0 0 chrX 161309721 161309762 -5340534 + AT_rich Low_complexity Low_complexity 1 41 0 4 1815 1594 31 0 5 chrX 161309792 161309986 -5340310 - L1_Mus1 LINE L1 -4 6563 6371 4 1815 720 364 71 9 chrX 161310306 161310628 -5339668 - LTR16C LTR ERVL -79 410 69 4 1815 364 311 84 102 chrX 161311677 161311892 -5338404 + MLT1D LTR MaLR 1 211 -294 4 1815 608 329 34 0 chrX 161311923 161312130 -5338166 + MLT1D LTR MaLR 283 496 -9 4 1815 387 359 112 23 chrX 161312303 161312517 -5337779 + L1MD3 LINE L1 6773 7005 -877 4 1815 811 274 147 26 chrX 161313028 161313458 -5336838 + L1MD3 LINE L1 7315 7796 -199 4 1815 21 0 0 0 chrX 161313948 161313969 -5336327 + AT_rich Low_complexity Low_complexity 1 21 0 4 1815 395 266 14 0 chrX 161314018 161314157 -5336139 + L1MC3 LINE L1 6920 7060 -725 4 1815 3649 115 47 2 chrX 161315085 161315641 -5334655 + Lx LINE L1 6067 6647 -7 4 1815 663 306 10 11 chrX 161317876 161318080 -5332216 - B3A SINE B2 -1 215 13 4 1815 236 380 8 83 chrX 161318237 161318369 -5331927 + MLT1L LTR MaLR 336 457 -153 4 1815 211 205 0 0 chrX 161320229 161320268 -5330028 + (TTG)n Simple_repeat Simple_repeat 2 40 0 4 1815 1657 209 47 15 chrX 161320322 161320662 -5329634 + MTEb LTR MaLR 1 351 -28 4 1815 256 340 0 11 chrX 161321255 161321350 -5328946 - L1M5 LINE L1 -555 5685 5592 4 1815 1098 82 38 0 chrX 161321359 161321517 -5328779 - B2_Mm2 SINE B2 -31 164 1 4 1815 216 0 0 0 chrX 161321650 161321674 -5328622 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 1815 285 309 12 0 chrX 161321700 161321781 -5328515 - ID4 SINE ID 0 83 2 4 1815 1425 188 7 41 chrX 161322472 161322766 -5327530 + Lx5 LINE L1 6767 7050 0 4 1815 25 0 0 0 chrX 161322932 161322957 -5327339 + AT_rich Low_complexity Low_complexity 1 25 0 4 1815 348 286 72 55 chrX 161323298 161323479 -5326817 + RLTR23 LTR ERV1 247 430 0 4 1815 405 0 0 0 chrX 161324278 161324323 -5325973 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1815 2563 217 69 15 chrX 161324419 161325031 -5325265 + Lx6 LINE L1 6814 7458 -2 4 1815 233 293 69 0 chrX 161325220 161325278 -5325018 + ID SINE ID 3 64 -160 4 1815 432 271 89 1 chrX 161325509 161325654 -5324642 - MER57F LTR ERV1 -5 431 213 4 1815 1464 55 10 10 chrX 161325737 161325938 -5324358 - L1_Mus3 LINE L1 -14 6624 6424 4 1815 1393 54 0 0 chrX 161325939 161326124 -5324172 + L1_Mus3 LINE L1 6094 6278 -360 4 1815 278 319 41 75 chrX 161326334 161326448 -5323848 - B1_Mus2 SINE Alu -1 146 37 4 1815 2976 19 2 88 chrX 161326448 161326847 -5323449 - RLTR10B2 LTR ERVK 0 365 1 4 1815 278 319 41 75 chrX 161326847 161326878 -5323418 - B1_Mus2 SINE Alu -111 36 6 4 1815 589 166 291 0 chrX 161327194 161327345 -5322951 - MTD LTR MaLR 0 419 225 4 1815 2465 311 44 14 chrX 161327346 161328297 -5321999 + Lx8 LINE L1 6258 7237 -236 4 1815 1251 41 0 0 chrX 161328637 161328784 -5321512 + B1_Mus2 SINE Alu 1 147 0 4 1815 3302 39 3 0 chrX 161328827 161329211 -5321085 - IAPEY_LTR LTR ERVK 0 385 1 4 1815 20761 47 3 6 chrX 161329211 161331931 -5318365 - IAPEy-int LTR ERVK 0 7513 4804 4 1815 2658 137 10 23 chrX 161331931 161332610 -5317686 - IAPEy-int LTR ERVK -6455 1058 1 4 1815 3302 39 3 0 chrX 161332610 161332994 -5317302 - IAPEY_LTR LTR ERVK 0 385 1 4 1815 271 337 93 8 chrX 161333208 161333456 -5316840 + L1M2 LINE L1 2199 2467 -4382 4 1815 263 83 32 32 chrX 161334424 161334486 -5315810 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 1815 866 260 144 32 chrX 161335496 161335866 -5314430 + LTR48B LTR ERV1 159 614 -30 4 1815 242 206 113 85 chrX 161336505 161336611 -5313685 - LTR29 LTR ERV1 -130 492 384 4 1815 419 282 30 8 chrX 161336733 161336865 -5313431 - MTE-int LTR MaLR -35 1545 1411 4 1815 377 258 167 16 chrX 161336865 161336991 -5313305 + RSINE1 SINE B4 4 148 -17 4 1815 643 348 59 36 chrX 161337060 161337364 -5312932 - MTE-int LTR MaLR -156 1424 1114 4 1815 614 180 49 28 chrX 161337364 161337507 -5312789 + RMER17C LTR ERVK 1 146 -264 4 1815 27 0 0 0 chrX 161337518 161337545 -5312751 + AT_rich Low_complexity Low_complexity 1 27 0 5 1815 259 259 45 34 chrX 161338283 161338371 -5311925 + MER21B LTR ERV1 621 709 -154 5 1815 437 278 95 59 chrX 161338383 161338479 -5311817 - LTR37A LTR ERV1 -191 235 136 5 1815 1002 231 18 23 chrX 161338479 161338696 -5311600 + B3 SINE B2 1 216 0 5 1815 437 278 95 59 chrX 161338696 161338821 -5311475 - LTR37A LTR ERV1 -291 135 6 5 1815 375 265 8 79 chrX 161339503 161339630 -5310666 + MER5A DNA MER1_type 1 118 -71 5 1815 211 362 17 87 chrX 161340868 161340983 -5309313 + B3A SINE B2 58 164 -34 5 1815 351 298 89 13 chrX 161341031 161341216 -5309080 + LTR48B LTR ERV1 426 590 -54 5 1815 203 32 65 0 chrX 161341364 161341395 -5308901 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 5 1815 615 51 61 0 chrX 161341620 161341718 -5308578 - L1Md_F3 LINE L1 -1 6583 6480 5 1815 252 309 62 69 chrX 161341953 161342113 -5308183 + MER5B DNA MER1_type 1 159 -19 5 1815 252 0 0 0 chrX 161342592 161342620 -5307676 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1815 432 0 0 0 chrX 161342620 161342667 -5307629 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 1815 280 0 50 0 chrX 161342759 161342799 -5307497 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 5 1815 784 292 70 14 chrX 161342847 161343032 -5307264 - L1MD LINE L1 -810 5432 5239 5 1815 983 273 60 115 chrX 161343032 161343433 -5306863 + MTE2b LTR MaLR 1 379 0 5 1815 784 289 76 15 chrX 161343433 161343614 -5306682 - L1MD LINE L1 -908 5238 5044 5 1815 271 250 13 13 chrX 161343703 161343780 -5306516 + Lx8 LINE L1 7393 7469 -4 5 1815 525 71 0 0 chrX 161344318 161344388 -5305908 + (TA)n Simple_repeat Simple_repeat 2 71 0 5 1815 661 190 26 0 chrX 161344427 161344543 -5305753 - B3 SINE B2 0 216 98 5 1815 621 281 24 78 chrX 161344577 161344743 -5305553 + RSINE1 SINE B4 9 165 0 5 1815 204 167 0 23 chrX 161344752 161344795 -5305501 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 5 1815 659 142 18 0 chrX 161344907 161345020 -5305276 + BC1_Mm scRNA scRNA 1 115 -37 5 1815 673 228 52 35 chrX 161345020 161345193 -5305103 + B3A SINE B2 5 180 -18 5 1815 21 0 0 0 chrX 161345196 161345217 -5305079 + AT_rich Low_complexity Low_complexity 1 21 0 5 1815 346 267 40 0 chrX 161345416 161345491 -5304805 + PB1D10 SINE Alu 35 112 -5 5 1815 345 240 83 39 chrX 161345483 161345607 -5304689 - Charlie5 DNA MER1_type -65 2559 2428 5 1815 3666 52 0 0 chrX 161345607 161346029 -5304267 - L1_Mus1 LINE L1 0 6567 6146 5 1815 345 240 83 39 chrX 161346029 161346059 -5304237 - Charlie5 DNA MER1_type -197 2427 2398 5 1815 740 237 8 0 chrX 161346059 161346190 -5304106 + RSINE1 SINE B4 2 133 -32 5 1815 298 297 97 19 chrX 161347144 161347247 -5303049 - PB1D10 SINE Alu -6 111 1 5 1815 616 268 22 7 chrX 161347247 161347313 -5302983 - ID SINE ID -141 83 16 5 1815 723 98 0 0 chrX 161347316 161347439 -5302857 + (TTCC)n Simple_repeat Simple_repeat 3 125 0 5 1815 784 270 117 13 chrX 161347652 161347960 -5302336 - RMER5 LTR ERV1 -4 530 191 5 1815 717 259 0 0 chrX 161348039 161348178 -5302118 + B1F SINE Alu 1 139 -10 5 1815 638 282 15 86 chrX 161348227 161348425 -5301871 - B4 SINE B4 0 292 109 5 1815 311 239 235 52 chrX 161348851 161348966 -5301330 - B4 SINE B4 -154 138 3 5 1815 240 86 0 0 chrX 161349533 161349568 -5300728 + (CACCC)n Simple_repeat Simple_repeat 2 36 0 5 1816 302 281 0 0 chrX 161350027 161350091 -5300205 - ID4_ SINE ID -15 68 5 5 1816 874 275 124 8 chrX 161350097 161350401 -5299895 - MTEb LTR MaLR 0 379 42 5 1816 563 290 214 13 chrX 161350453 161350677 -5299619 - B4A SINE B4 -9 283 15 5 1816 203 258 0 31 chrX 161351179 161351243 -5299053 + GA-rich Low_complexity Low_complexity 4 65 0 5 1816 398 309 81 22 chrX 161351288 161351473 -5298823 - MER20 DNA MER1_type -8 211 16 5 1816 220 292 236 104 chrX 161351646 161351739 -5298557 - B4 SINE B4 -18 274 152 5 1816 3439 57 163 2 chrX 161351739 161352180 -5298116 + RLTR1B LTR ERV1 1 512 0 5 1816 220 292 236 104 chrX 161352180 161352327 -5297969 - B4 SINE B4 -141 151 2 5 1816 689 152 152 0 chrX 161352745 161352857 -5297439 + B1_Mus1 SINE Alu 5 133 -15 5 1816 3118 57 83 3 chrX 161352857 161353244 -5297052 - BGLII LTR ERVK -3 418 1 5 1816 218 148 32 32 chrX 161353684 161353747 -5296549 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 5 1816 336 132 0 0 chrX 161354049 161354102 -5296194 - ID_B1 SINE B4 -6 218 166 5 1816 625 187 48 16 chrX 161354123 161354248 -5296048 - RSINE1 SINE B4 -26 139 11 5 1816 318 328 92 23 chrX 161354371 161354502 -5295794 + MLT1A1 LTR MaLR 269 408 0 5 1816 525 250 0 0 chrX 161354513 161354621 -5295675 + MER5A1 DNA MER1_type 32 139 -27 5 1816 1472 281 19 25 chrX 161354712 161355080 -5295216 - MTE2b LTR MaLR -13 366 1 5 1816 396 138 0 0 chrX 161355873 161355938 -5294358 + (TA)n Simple_repeat Simple_repeat 1 65 0 5 1816 898 282 14 19 chrX 161356019 161356232 -5294064 + B3 SINE B2 1 212 -4 5 1816 749 262 10 10 chrX 161356254 161356451 -5293845 - B3A SINE B2 0 198 2 5 1816 372 22 0 0 chrX 161357224 161357269 -5293027 + (TC)n Simple_repeat Simple_repeat 1 45 0 5 1816 1107 288 66 22 chrX 161357621 161357991 -5292305 + MTE2b LTR MaLR 1 370 0 5 1816 233 307 138 17 chrX 161358202 161358318 -5291978 + LTR80B LTR ERVL 79 208 -376 5 1816 1034 160 27 58 chrX 161358315 161358621 -5291675 + RMER17B LTR ERVK 16 441 -517 5 1816 247 255 0 0 chrX 161358624 161358675 -5291621 - RMER17B LTR ERVK -732 226 176 5 1816 228 340 77 82 chrX 161358696 161358866 -5291430 + LTR80B LTR ERVL 234 402 -182 5 1816 459 0 0 0 chrX 161358976 161359027 -5291269 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 1816 493 313 12 87 chrX 161359135 161359296 -5291000 - B4A SINE B4 -141 151 3 5 1816 2906 162 17 9 chrX 161360961 161361422 -5288874 - Lx4A LINE L1 -2 7056 6592 5 1816 560 30 0 0 chrX 161361422 161361488 -5288808 - L1Md_F3 LINE L1 -427 6157 6092 5 1816 3400 57 31 0 chrX 161361488 161361908 -5288388 + L1Md_F3 LINE L1 6152 6584 0 5 1816 1900 110 15 0 chrX 161361908 161362171 -5288125 - Lx4A LINE L1 -452 6606 6340 5 1816 216 283 0 0 chrX 161362349 161362409 -5287887 + ID4 SINE ID 24 83 0 5 1816 301 140 0 0 chrX 161363053 161363103 -5287193 - L1_Mur3 LINE L1 -2415 3465 3416 5 1816 1483 177 194 0 chrX 161363102 161363412 -5286884 + Lx6 LINE L1 6509 6878 -582 5 1816 480 18 0 0 chrX 161363416 161363473 -5286823 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1816 909 267 95 25 chrX 161363499 161363783 -5286513 + MTE2a LTR MaLR 76 379 0 5 1816 9956 81 28 21 chrX 161363849 161364937 -5285359 - Lx3_Mus LINE L1 -7 7002 5906 5 1816 186 43 0 0 chrX 161364937 161364960 -5285336 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1816 9956 75 5 5 chrX 161364960 161365510 -5284786 - Lx3_Mus LINE L1 -1104 5905 5359 5 1816 3403 78 0 2 chrX 161365526 161365949 -5284347 - L1_Mus2 LINE L1 0 6566 6145 5 1816 15491 108 38 35 chrX 161365949 161369184 -5281112 - Lx3_Mus LINE L1 -2420 3466 210 5 1816 921 224 34 14 chrX 161369213 161369421 -5280875 - B3 SINE B2 0 216 5 5 1816 395 243 89 68 chrX 161370185 161370331 -5279965 - MTC-int LTR MaLR -948 310 162 5 1816 706 314 109 23 chrX 161371199 161371502 -5278794 + MLT1E1A LTR MaLR 76 404 -276 5 1816 324 269 446 75 chrX 161371911 161372124 -5278172 - B4A SINE B4 0 292 1 5 1816 453 265 22 156 chrX 161372619 161372798 -5277498 - B4 SINE B4 -136 156 2 5 1816 465 295 9 0 chrX 161377182 161377294 -5273002 + PB1D7 SINE Alu 1 113 -7 5 1816 205 219 27 0 chrX 161377314 161377387 -5272909 + A-rich Low_complexity Low_complexity 2 76 0 5 1816 261 0 0 0 chrX 161377721 161377750 -5272546 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1816 204 40 0 0 chrX 161377750 161377774 -5272522 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 1816 357 260 0 13 chrX 161378714 161378792 -5271504 - ID4_ SINE ID -4 79 3 5 1816 345 281 0 2 chrX 161378874 161378960 -5271336 + B1F SINE Alu 33 117 -3 5 1816 200 206 44 0 chrX 161378988 161379056 -5271240 + A-rich Low_complexity Low_complexity 3 73 0 5 1816 1116 58 0 0 chrX 161379219 161379358 -5270938 + B1_Mm SINE Alu 9 147 0 5 1816 236 386 71 35 chrX 161379615 161379784 -5270512 + L2a LINE L2 2995 3169 -257 5 1816 257 246 98 162 chrX 161379788 161379833 -5270463 - MER20 DNA MER1_type 0 219 186 5 1816 3628 27 0 198 chrX 161379833 161380425 -5269871 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1816 257 246 98 162 chrX 161380425 161380583 -5269713 - MER20 DNA MER1_type -34 185 29 5 1816 1245 36 0 0 chrX 161380764 161380902 -5269394 + B1_Mus2 SINE Alu 1 138 -9 5 1816 1299 78 0 0 chrX 161381881 161382137 -5268159 + (GA)n Simple_repeat Simple_repeat 1 256 0 5 1816 606 224 40 0 chrX 161382398 161382523 -5267773 - B1_Mur1 SINE Alu -7 142 13 5 1816 266 284 8 99 chrX 161382426 161382547 -5267749 - MT2B LTR ERVL -338 263 154 5 1816 358 256 13 13 chrX 161384677 161384756 -5265540 - ID4 SINE ID -4 79 1 5 1816 400 229 0 0 chrX 161385881 161385951 -5264345 - ID4_ SINE ID -10 73 4 5 1816 357 268 0 0 chrX 161386559 161386630 -5263666 + ID4_ SINE ID 10 80 -3 5 1816 936 281 35 53 chrX 161386701 161386983 -5263313 + B4A SINE B4 13 289 -3 5 1816 559 283 36 65 chrX 161387041 161387218 -5263078 + B3A SINE B2 3 175 -18 5 1816 429 20 0 0 chrX 161387218 161387268 -5263028 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1816 288 326 52 78 chrX 161387268 161387283 -5263013 + B2_Mm1a SINE B2 176 190 -3 5 1816 315 317 88 10 chrX 161387321 161387423 -5262873 + PB1D10 SINE Alu 1 110 -7 5 1816 198 0 0 0 chrX 161387768 161387790 -5262506 + (CAAAC)n Simple_repeat Simple_repeat 3 24 0 5 1816 243 0 0 0 chrX 161387787 161387814 -5262482 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1816 395 290 50 0 chrX 161387824 161387924 -5262372 - PB1D10 SINE Alu -10 107 3 5 1816 7415 76 11 3 chrX 161388323 161389271 -5261025 + Lx3_Mus LINE L1 6054 7008 -1 5 1816 419 317 93 99 chrX 161390930 161391263 -5259033 + MER77 LTR ERVL 54 384 -223 6 1816 5936 11 0 5 chrX 161391473 161392179 -5258117 - L1Md_T LINE L1 0 6582 5917 6 1816 3902 23 0 0 chrX 161392179 161392650 -5257646 + L1Md_T LINE L1 5413 5883 0 6 1816 482 269 55 20 chrX 161392661 161392714 -5257582 - L1M4 LINE L1 -2170 3976 3918 6 1816 351 0 0 0 chrX 161392714 161392753 -5257543 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1816 482 251 57 23 chrX 161392753 161392895 -5257401 - L1M4 LINE L1 -2229 3917 3774 6 1816 207 0 0 0 chrX 161392901 161392924 -5257372 + (TGG)n Simple_repeat Simple_repeat 1 23 0 6 1816 820 304 16 70 chrX 161392953 161393211 -5257085 - B4 SINE B4 -4 288 45 6 1816 351 271 94 82 chrX 161393387 161393885 -5256411 - L1M4 LINE L1 -2472 3674 3171 6 1816 376 188 0 70 chrX 161396100 161396186 -5254110 + ID2 SINE ID 4 83 0 6 1816 21 0 0 0 chrX 161396650 161396671 -5253625 + AT_rich Low_complexity Low_complexity 1 21 0 6 1816 23 0 0 0 chrX 161396749 161396772 -5253524 + AT_rich Low_complexity Low_complexity 1 23 0 6 1816 2255 88 45 3 chrX 161398237 161398569 -5251727 - L1_Mus3 LINE L1 -6 6632 6287 6 1816 294 73 0 0 chrX 161398986 161399027 -5251269 - U2 snRNA snRNA -147 41 1 6 1816 326 327 20 0 chrX 161399314 161399415 -5250881 - PB1 SINE Alu -7 120 18 6 1816 194 105 0 26 chrX 161400204 161400243 -5250053 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 1816 202 278 0 0 chrX 161401147 161401201 -5249095 + GA-rich Low_complexity Low_complexity 3 56 0 6 1816 566 188 58 25 chrX 161401533 161401653 -5248643 + ORR1D1 LTR MaLR 210 333 -41 6 1816 555 185 75 75 chrX 161402097 161402296 -5248000 + Lx3C LINE L1 6778 6976 0 6 1816 420 265 29 19 chrX 161403284 161403388 -5246908 - PB1 SINE Alu -8 119 15 6 1816 234 329 53 0 chrX 161403527 161403603 -5246693 - ID_B1 SINE B4 -63 161 82 6 1816 599 148 130 8 chrX 161404329 161404452 -5245844 - RLTR11A2 LTR ERVK -1 526 389 6 1816 2461 179 99 27 chrX 161404452 161405008 -5245288 + Lx3C LINE L1 6374 6969 -7 6 1816 1780 192 83 29 chrX 161405008 161405427 -5244869 - RLTR11A2 LTR ERVK -85 442 1 6 1816 235 285 105 25 chrX 161405753 161405881 -5244415 + MIRb SINE MIR 102 249 -19 6 1816 207 370 20 20 chrX 161405910 161406012 -5244284 + MIR3 SINE MIR 85 186 -22 6 1816 1265 299 148 4 chrX 161406151 161406665 -5243631 - Charlie1a DNA MER1_type -854 601 14 6 1816 271 333 7 20 chrX 161406970 161407117 -5243179 + GA-rich Low_complexity Low_complexity 5 149 0 6 1816 25 65 0 0 chrX 161407260 161407306 -5242990 + AT_rich Low_complexity Low_complexity 1 46 0 6 1816 1734 250 58 123 chrX 161407466 161407809 -5242487 + RMER17B LTR ERVK 1 330 -576 6 1816 201 74 0 0 chrX 161407809 161407836 -5242460 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1816 1160 22 0 21 chrX 161407836 161407977 -5242319 - B1_Mus2 SINE Alu -9 138 1 6 1816 1734 236 42 135 chrX 161407977 161408668 -5241628 + RMER17B LTR ERVK 315 925 -33 6 1816 252 0 0 0 chrX 161408678 161408706 -5241590 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 6 1816 360 313 30 7 chrX 161409380 161409515 -5240781 + B1F1 SINE Alu 3 140 -9 6 1816 298 246 14 14 chrX 161409535 161409605 -5240691 + ID4_ SINE ID 3 72 -11 6 1816 348 24 0 0 chrX 161409629 161409670 -5240626 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1816 194 0 39 0 chrX 161410042 161410068 -5240228 + (CAA)n Simple_repeat Simple_repeat 2 28 0 6 1816 381 315 110 0 chrX 161410988 161411115 -5239181 - ID_B1 SINE B4 -4 220 80 6 1816 767 294 66 71 chrX 161411129 161411539 -5238757 + MTE2a LTR MaLR 1 419 0 6 1816 1541 128 74 0 chrX 161411914 161412172 -5238124 - Lx4A LINE L1 -261 6797 6521 6 1816 264 139 14 27 chrX 161412171 161412245 -5238051 + Lx4B LINE L1 6923 6995 -63 6 1816 3152 44 15 8 chrX 161413044 161413437 -5236859 - MTA_Mm LTR MaLR 0 396 1 6 1816 341 291 73 120 chrX 161414072 161414346 -5235950 - ORR1E LTR MaLR -52 307 47 6 1816 296 297 111 63 chrX 161414455 161414581 -5235715 - ID_B1 SINE B4 -6 218 87 6 1816 313 312 31 32 chrX 161415182 161415322 -5234974 - B1F1 SINE Alu -1 148 10 6 1816 210 71 0 0 chrX 161415634 161415662 -5234634 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 6 1816 202 267 158 13 chrX 161415767 161415843 -5234453 - L2c LINE L2 -4 3383 3297 6 1816 199 382 65 8 chrX 161416043 161416167 -5234129 - L2c LINE L2 -320 3106 2976 6 1816 285 232 259 16 chrX 161416171 161416364 -5233932 + MER112 DNA MER1_type 4 243 -18 6 1816 375 316 24 72 chrX 161416371 161416538 -5233758 - L2c LINE L2 -447 2972 2814 6 1816 274 249 58 32 chrX 161418802 161418914 -5231382 - PB1D7 SINE Alu -20 129 9 6 1816 324 322 118 7 chrX 161419057 161419201 -5231095 + MER20 DNA MER1_type 59 218 -1 6 1816 253 318 24 0 chrX 161419906 161419991 -5230305 - RSINE1 SINE B4 0 165 79 6 1816 267 93 0 0 chrX 161420125 161420168 -5230128 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 1816 1142 131 44 0 chrX 161421629 161421812 -5228484 - B2_Mm2 SINE B2 -3 192 2 6 1816 182 62 31 0 chrX 161421813 161421845 -5228451 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 6 1816 26 64 0 0 chrX 161421936 161421983 -5228313 + AT_rich Low_complexity Low_complexity 1 47 0 6 1816 26 0 0 0 chrX 161422170 161422196 -5228100 + AT_rich Low_complexity Low_complexity 1 26 0 6 1816 416 240 70 4 chrX 161422551 161422678 -5227618 + MER33 DNA MER1_type 2 121 -203 6 1816 750 318 45 36 chrX 161422847 161423081 -5227215 + MER2 DNA MER2_type 5 252 -93 6 1816 815 203 0 0 chrX 161423081 161423224 -5227072 - B1_Mus2 SINE Alu -2 145 3 6 1816 750 318 45 36 chrX 161423224 161423325 -5226971 + MER2 DNA MER2_type 253 342 -3 6 1816 349 194 0 0 chrX 161423492 161423559 -5226737 + Lx9 LINE L1 7184 7250 -394 6 1816 225 371 48 20 chrX 161423624 161423770 -5226526 - L4 LINE RTE -722 1307 1158 6 1816 263 168 61 17 chrX 161424675 161424790 -5225506 + (TA)n Simple_repeat Simple_repeat 1 120 0 6 1816 492 238 148 0 chrX 161425089 161425211 -5225085 + RSINE1 SINE B4 9 148 -17 6 1816 285 29 0 0 chrX 161425766 161425800 -5224496 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1816 450 295 53 8 chrX 161425953 161426086 -5224210 + B1F SINE Alu 9 147 -2 6 1816 243 308 44 61 chrX 161426343 161426457 -5223839 + B1F2 SINE Alu 1 112 -37 6 1816 282 291 86 145 chrX 161426517 161426561 -5223735 - MTEa LTR MaLR -7 372 323 6 1816 898 158 107 56 chrX 161426561 161426776 -5223520 + URR1A DNA MER1_type 1 226 0 6 1816 297 291 86 145 chrX 161426776 161427056 -5223240 - MTEa LTR MaLR -57 322 67 6 1816 189 260 0 39 chrX 161427142 161427194 -5223102 - MIR SINE MIR -60 148 99 6 1816 242 0 61 0 chrX 161428509 161428542 -5221754 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1816 1750 157 70 28 chrX 161428555 161428975 -5221321 - RMER17C LTR ERVK -505 453 16 6 1816 497 273 76 56 chrX 161429808 161430006 -5220290 + MIRb SINE MIR 59 260 -8 6 1816 21 0 0 0 chrX 161430407 161430428 -5219868 + AT_rich Low_complexity Low_complexity 1 21 0 6 1816 186 43 0 0 chrX 161430610 161430633 -5219663 + (T)n Simple_repeat Simple_repeat 1 23 0 6 1816 263 247 82 0 chrX 161430870 161430955 -5219341 - MER33 DNA MER1_type 0 324 233 6 1816 180 111 0 0 chrX 161430963 161430990 -5219306 + (CATA)n Simple_repeat Simple_repeat 2 28 0 6 1816 22 35 0 0 chrX 161431185 161431214 -5219082 + AT_rich Low_complexity Low_complexity 1 29 0 6 1816 235 263 83 10 chrX 161431227 161431323 -5218973 - MER33 DNA MER1_type -67 257 155 6 1816 201 158 0 0 chrX 161431323 161431361 -5218935 + A-rich Low_complexity Low_complexity 1 38 0 6 1816 340 331 50 14 chrX 161431677 161431818 -5218478 - B1F2 SINE Alu 0 149 4 6 1816 247 296 58 16 chrX 161432007 161432196 -5218100 - L1MC5 LINE L1 -546 7415 7219 6 1816 22 0 0 0 chrX 161432869 161432891 -5217405 + AT_rich Low_complexity Low_complexity 1 22 0 6 1816 892 151 7 27 chrX 161434124 161434274 -5216022 + B1_Mus1 SINE Alu 1 147 -1 6 1816 397 295 22 52 chrX 161435254 161435390 -5214906 - B1F SINE Alu -17 132 1 6 1816 419 300 16 24 chrX 161435580 161435703 -5214593 - MER20 DNA MER1_type -10 209 88 6 1816 256 219 46 119 chrX 161435728 161435837 -5214459 + MER20 DNA MER1_type 118 218 -1 6 1816 189 0 0 0 chrX 161435881 161435902 -5214394 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 6 1816 298 325 143 37 chrX 161436209 161436426 -5213870 + B4 SINE B4 1 240 -52 6 1816 377 285 118 0 chrX 161436694 161436838 -5213458 - RSINE1 SINE B4 -4 161 1 6 1816 523 285 203 3 chrX 161437366 161437721 -5212575 - Lx9 LINE L1 -5 7639 7214 6 1816 349 274 79 16 chrX 161437850 161437976 -5212320 - B1F1 SINE Alu -15 134 1 6 1816 223 87 0 61 chrX 161439118 161439167 -5211129 + (GAAAA)n Simple_repeat Simple_repeat 3 48 0 6 1816 1788 209 62 47 chrX 161439597 161440660 -5209636 - RMER3D-int LTR ERVK -1299 1543 2 6 1816 2245 231 64 24 chrX 161440697 161441292 -5209004 - RLTR17 LTR ERVK -73 619 1 6 1816 465 19 0 0 chrX 161441704 161441758 -5208538 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 1816 240 326 140 20 chrX 161441758 161441858 -5208438 - B1F SINE Alu -13 136 25 6 1816 341 267 123 53 chrX 161442828 161442998 -5207298 - MER3 DNA MER1_type -27 182 1 6 1816 277 323 30 16 chrX 161443001 161443144 -5207152 - MIR SINE MIR -95 173 25 6 1816 208 271 142 39 chrX 161444252 161444379 -5205917 - L2c LINE L2 -20 3367 3228 6 1816 1185 123 43 5 chrX 161444589 161444777 -5205519 + B2_Mm2 SINE B2 1 195 0 6 1816 200 267 0 0 chrX 161445019 161445064 -5205232 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1816 216 0 0 0 chrX 161445678 161445702 -5204594 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1816 4634 158 65 4 chrX 161446027 161446932 -5203364 - L1_Mur3 LINE L1 -1743 4137 3178 6 1816 6150 191 18 31 chrX 161446932 161448670 -5201626 + Lx6 LINE L1 4690 6408 -1052 6 1816 7595 106 15 11 chrX 161448673 161449748 -5200548 - MERVK26-int LTR ERVK -5840 1079 1 7 1816 3488 148 59 7 chrX 161449748 161450358 -5199938 - RLTR26 LTR ERVK 0 642 1 7 1816 2927 232 38 16 chrX 161450360 161450841 -5199455 + Lx6 LINE L1 6396 6876 -584 6 1816 270 0 0 0 chrX 161450841 161450871 -5199425 + (TC)n Simple_repeat Simple_repeat 1 30 0 7 1816 360 0 0 0 chrX 161450871 161450910 -5199386 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 1816 360 0 0 0 chrX 161450910 161450949 -5199347 + (GA)n Simple_repeat Simple_repeat 2 41 0 7 1816 2927 251 256 5 chrX 161450949 161451397 -5198899 + Lx6 LINE L1 6877 7448 -12 6 1816 427 221 42 0 chrX 161451397 161451492 -5198804 + ID_B1 SINE B4 124 222 -2 7 1816 450 271 0 0 chrX 161451847 161451943 -5198353 + L1MEg2 LINE L1 568 663 -5789 7 1816 492 364 25 25 chrX 161451993 161452235 -5198061 + L1MEg2 LINE L1 755 996 -5456 7 1816 360 312 69 51 chrX 161452408 161452783 -5197513 + L1MEg2 LINE L1 2292 2673 -4877 7 1816 292 333 28 9 chrX 161453188 161453297 -5196999 + MIRb SINE MIR 26 136 -132 7 1816 467 315 85 122 chrX 161453299 161453628 -5196668 - MER76 LTR ERVL -7 684 368 7 1816 529 162 76 8 chrX 161453655 161453773 -5196523 + Lx4B LINE L1 6636 6761 -297 7 1816 4377 61 13 3 chrX 161453770 161454381 -5195915 + MusHAL1 LINE L1 74 690 -2022 7 1816 790 68 120 0 chrX 161454367 161454484 -5195812 + MusHAL1 LINE L1 996 1126 -1586 7 1816 1721 259 42 81 chrX 161454595 161455443 -5194853 - L1_Rod LINE L1 -1235 4612 3798 7 1816 21 36 0 0 chrX 161455443 161455471 -5194825 + AT_rich Low_complexity Low_complexity 1 28 0 7 1816 1128 138 11 0 chrX 161455512 161455686 -5194610 + B2_Mm1t SINE B2 1 176 -17 7 1816 366 105 295 18 chrX 161455717 161455827 -5194469 + B2_Mm2 SINE B2 47 190 -5 7 1816 204 286 63 0 chrX 161456040 161456103 -5194193 + MIR SINE MIR 185 251 -11 7 1816 464 306 16 32 chrX 161456482 161456663 -5193633 + L1MC LINE L1 5458 5641 -483 7 1816 231 36 0 0 chrX 161456875 161456903 -5193393 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 1816 1175 54 6 0 chrX 161456903 161457070 -5193226 + (GA)n Simple_repeat Simple_repeat 2 170 0 7 1816 361 186 304 0 chrX 161457091 161457193 -5193103 - B1F SINE Alu -15 134 2 7 1816 386 258 37 62 chrX 161457587 161457748 -5192548 + MLT1D LTR MaLR 349 505 0 7 1816 1200 41 0 0 chrX 161457899 161458044 -5192252 + B1_Mus1 SINE Alu 4 148 0 7 1816 486 103 0 0 chrX 161458116 161458194 -5192102 + (TG)n Simple_repeat Simple_repeat 1 78 0 7 1816 271 270 16 0 chrX 161458196 161458259 -5192037 - B4A SINE B4 -131 161 98 7 1816 936 91 0 0 chrX 161458422 161458554 -5191742 + (GGGAA)n Simple_repeat Simple_repeat 4 135 0 7 1816 1107 82 0 7 chrX 161458570 161458718 -5191578 + B1_Mm SINE Alu 1 147 0 7 1816 711 0 0 0 chrX 161458728 161458807 -5191489 + (GGAAA)n Simple_repeat Simple_repeat 3 81 0 7 1816 307 351 74 11 chrX 161460958 161461134 -5189162 - L2 LINE L2 -558 2861 2675 7 1816 556 234 0 8 chrX 161461218 161461343 -5188953 + B1F SINE Alu 22 145 -4 7 1816 2117 284 113 43 chrX 161461390 161462897 -5187399 - L1M2c LINE L1 -782 6003 4362 7 1816 643 255 28 0 chrX 161462940 161463156 -5187140 + L1M2 LINE L1 3299 3520 -2623 7 1816 258 286 83 0 chrX 161463165 161463249 -5187047 - L1M2c LINE L1 -5258 1531 1441 7 1816 7865 75 16 31 chrX 161463577 161464726 -5185570 - Lx3_Mus LINE L1 0 7009 5879 7 1816 1026 142 34 46 chrX 161465155 161465392 -5184904 - Lx2B LINE L1 -4 6996 6763 7 1816 337 257 99 18 chrX 161465649 161465760 -5184536 + MIR3 SINE MIR 87 206 -2 7 1816 307 270 17 43 chrX 161465780 161465896 -5184400 - Tigger15a DNA TcMar -143 572 460 7 1816 330 313 133 5 chrX 161466484 161466658 -5183638 - MIRc SINE MIR -63 205 5 7 1816 2582 229 43 19 chrX 161466707 161467388 -5182908 + L1MA5A LINE L1 4965 5661 -186 7 1816 1168 251 38 27 chrX 161467408 161467781 -5182515 - L1M2 LINE L1 -1099 5044 4668 7 1816 3276 179 50 113 chrX 161467801 161468657 -5181639 + RLTR40 LTR ERVK 1 802 -15 7 1816 349 224 24 49 chrX 161468694 161468817 -5181479 + L1MA5A LINE L1 5733 5885 -412 7 1816 219 69 0 0 chrX 161468899 161468928 -5181368 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 1816 539 200 36 9 chrX 161469028 161469139 -5181157 - PB1D9 SINE Alu -2 118 5 7 1816 1160 283 44 28 chrX 161469149 161469622 -5180674 - L1M2 LINE L1 -1819 4324 3844 7 1816 204 271 17 0 chrX 161469622 161469681 -5180615 + (TA)n Simple_repeat Simple_repeat 2 61 0 7 1816 381 349 35 10 chrX 161469831 161470028 -5180268 - L1M2 LINE L1 -2596 3547 3346 7 1816 488 309 21 63 chrX 161470054 161470386 -5179910 - L1M2 LINE L1 -3003 3140 2823 7 1816 432 0 0 0 chrX 161470393 161470441 -5179855 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 7 1816 216 0 0 0 chrX 161472663 161472687 -5177609 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1816 273 289 21 47 chrX 161473032 161473149 -5177147 + B1F SINE Alu 9 120 0 7 1816 3983 144 12 1 chrX 161473663 161474310 -5175986 - Lx2B LINE L1 -4 6996 6343 7 1816 844 133 88 6 chrX 161474310 161474469 -5175827 + Lx3A LINE L1 6804 6975 -6 7 1816 730 147 18 12 chrX 161474485 161474617 -5175679 - Lx2B LINE L1 -709 6349 6219 7 1816 1284 67 0 0 chrX 161474666 161474906 -5175390 + (TTC)n Simple_repeat Simple_repeat 1 240 0 7 1816 375 360 22 0 chrX 161475729 161475868 -5174428 + B1F1 SINE Alu 1 142 -7 7 1816 5761 205 44 3 chrX 161475962 161477099 -5173197 - Lx5 LINE L1 -4 7046 5863 7 1816 3429 79 15 0 chrX 161477097 161477551 -5172745 - Lx3_Mus LINE L1 -242 6767 6307 7 1816 387 118 62 2 chrX 161477542 161477629 -5172667 + Lx3_Mus LINE L1 6843 6938 -71 7 28 29388 114 10 22 chrX 161477649 161484149 -5166147 + L1_Mus3 LINE L1 217 6638 0 7 1817 219 88 0 0 chrX 161484224 161484258 -5166038 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 1817 439 331 50 28 chrX 161484260 161484440 -5165856 + B4 SINE B4 80 263 -29 7 1817 25 31 0 0 chrX 161484555 161484587 -5165709 + AT_rich Low_complexity Low_complexity 1 32 0 7 1817 14420 159 17 61 chrX 161484606 161486352 -5163944 - L1_Mur2 LINE L1 -1680 4197 2457 7 1817 180 0 0 0 chrX 161486352 161486372 -5163924 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 7 1817 14420 159 17 61 chrX 161486372 161486785 -5163511 - L1_Mur2 LINE L1 -3421 2456 2054 7 1817 333 100 0 0 chrX 161486785 161486835 -5163461 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1817 14420 159 17 61 chrX 161486835 161487149 -5163147 - L1_Mur2 LINE L1 -3824 2053 1752 7 1817 357 24 0 0 chrX 161487149 161487191 -5163105 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 1817 14420 159 61 54 chrX 161487191 161488046 -5162250 - L1_Mur2 LINE L1 -4126 1751 882 7 1817 2411 174 128 10 chrX 161488264 161488759 -5161537 - RMER4B LTR ERVK 0 585 36 7 1817 441 0 0 0 chrX 161488759 161488808 -5161488 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1817 2411 174 128 10 chrX 161488808 161488835 -5161461 - RMER4B LTR ERVK -550 35 1 7 1817 558 349 66 12 chrX 161490404 161490662 -5159634 - MLT1B LTR MaLR 0 467 196 7 1817 2365 295 48 19 chrX 161490678 161491411 -5158885 - MLT1B-int LTR MaLR -507 864 111 7 1817 192 322 151 8 chrX 161491952 161492071 -5158225 + MIRb SINE MIR 23 158 -110 7 1817 464 248 49 6 chrX 161492289 161492451 -5157845 - L1MB8 LINE L1 -197 5981 5813 7 1817 937 167 200 0 chrX 161492502 161492682 -5157614 - B3 SINE B2 0 216 1 7 1817 777 253 38 112 chrX 161494578 161494769 -5155527 - MLT1B LTR MaLR -50 340 173 7 1817 331 346 0 0 chrX 161494769 161494873 -5155423 - PB1D10 SINE Alu -11 106 3 7 1817 777 253 38 112 chrX 161494873 161495046 -5155250 - MLT1B LTR MaLR -218 172 3 7 1817 25 51 0 0 chrX 161495519 161495558 -5154738 + AT_rich Low_complexity Low_complexity 1 39 0 7 1817 1094 78 7 0 chrX 161495813 161495967 -5154329 + (TTTCC)n Simple_repeat Simple_repeat 1 155 0 7 1817 831 122 0 0 chrX 161495969 161496100 -5154196 + (TTTC)n Simple_repeat Simple_repeat 4 134 0 7 1817 705 183 53 0 chrX 161496126 161496257 -5154039 - B1_Mur4 SINE Alu -12 138 1 7 1817 186 393 0 11 chrX 161496354 161496444 -5153852 + L2a LINE L2 3330 3418 -8 7 1817 189 0 0 0 chrX 161496873 161496894 -5153402 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 7 1817 266 254 0 0 chrX 161497339 161497406 -5152890 - Lx7 LINE L1 -17 7679 7613 7 1817 459 0 0 0 chrX 161497442 161497493 -5152803 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1817 273 302 0 16 chrX 161497808 161497872 -5152424 - ID4_ SINE ID -14 69 7 7 1817 946 250 96 41 chrX 161498222 161498585 -5151711 - L1MA7 LINE L1 -30 6261 5879 7 1817 934 79 0 0 chrX 161499289 161499415 -5150881 + B1_Mm SINE Alu 1 126 -21 7 1817 927 234 33 0 chrX 161499425 161499639 -5150657 + Lx7 LINE L1 7148 7368 -328 7 1817 503 234 33 71 chrX 161499735 161499919 -5150377 + Lx7 LINE L1 7346 7522 -174 7 1817 573 15 0 0 chrX 161499919 161499985 -5150311 + (CATAT)n Simple_repeat Simple_repeat 3 68 0 7 1817 414 200 0 29 chrX 161500000 161500103 -5150193 + Lx7 LINE L1 7575 7674 -22 1 1817 1144 69 0 7 chrX 161500103 161500249 -5150047 + B1_Mus1 SINE Alu 2 146 -2 2 1817 263 403 100 73 chrX 161500517 161500857 -5149439 + LTR16A LTR ERVL 2 350 -101 3 1817 189 74 0 0 chrX 161500959 161500986 -5149310 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1817 608 299 0 0 chrX 161500993 161501130 -5149166 - ORR1C1 LTR MaLR -218 141 5 5 1817 372 358 47 28 chrX 161501275 161501634 -5148662 + HERV16-int LTR ERVL 797 1162 -3834 6 1817 607 304 111 26 chrX 161501668 161501938 -5148358 + MLT1D LTR MaLR 15 307 -198 7 1817 386 331 7 21 chrX 161501951 161502093 -5148203 + MLT1D LTR MaLR 365 504 -1 7 1817 245 321 33 87 chrX 161503009 161503101 -5147195 + MER5A1 DNA MER1_type 1 87 -79 8 1817 1936 274 37 78 chrX 161503080 161503311 -5146985 - ORR1C1-int LTR MaLR -469 901 701 5 1817 3279 48 2 0 chrX 161503311 161503708 -5146588 + MTB LTR MaLR 3 400 0 9 1817 1936 274 37 78 chrX 161503708 161504126 -5146170 - ORR1C1-int LTR MaLR -670 700 279 5 1817 1909 181 21 52 chrX 161504175 161504560 -5145736 - ORR1C1 LTR MaLR 0 378 6 5 1817 1489 207 132 86 chrX 161504633 161505066 -5145230 + MT2A LTR ERVL 1 453 -80 1 1817 228 86 0 0 chrX 161505200 161505235 -5145061 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 1 1817 447 374 54 29 chrX 161505348 161505626 -5144670 + MER58B DNA MER1_type 14 298 -43 1 1817 1128 264 32 55 chrX 161505859 161506264 -5144032 + MTE2a LTR MaLR 8 405 -14 1 1817 1102 97 7 0 chrX 161506303 161506447 -5143849 - B1_Mus1 SINE Alu -2 146 2 1 1817 627 191 18 31 chrX 161507045 161507200 -5143096 - MLT1A1 LTR MaLR -12 396 211 1 1817 186 133 0 0 chrX 161507231 161507261 -5143035 + (CAAG)n Simple_repeat Simple_repeat 1 30 0 1 1817 515 305 5 83 chrX 161507688 161507821 -5142475 - MER20 DNA MER1_type -2 217 94 1 1817 4010 24 2 0 chrX 161507821 161508282 -5142014 - L1Md_F2 LINE L1 -13 6569 6108 1 1817 515 305 5 83 chrX 161508282 161508341 -5141955 - MER20 DNA MER1_type -126 93 40 1 1817 2613 181 58 31 chrX 161508593 161509180 -5141116 + Lx5 LINE L1 6448 7050 0 1 1817 186 195 24 0 chrX 161509495 161509536 -5140760 + L3 LINE CR1 2819 2860 -1629 2 1817 1434 292 77 16 chrX 161510526 161510968 -5139328 + Tigger7 DNA MER2_type 1 469 -2022 2 1817 318 193 52 61 chrX 161511879 161511988 -5138308 - B1_Mur2 SINE Alu 0 149 12 2 1817 648 270 54 5 chrX 161513070 161513275 -5137021 + Tigger7 DNA MER2_type 2246 2460 -31 2 1817 194 311 43 32 chrX 161513311 161513404 -5136892 - MIR SINE MIR -112 150 57 2 1817 327 25 0 0 chrX 161513484 161513524 -5136772 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 2 1817 305 301 79 22 chrX 161513794 161513933 -5136363 - B1_Mur2 SINE Alu -2 147 1 2 1817 277 357 23 23 chrX 161514305 161514437 -5135859 - LTR88c LTR Genie? -722 140 9 2 1817 1411 313 59 24 chrX 161514680 161515335 -5134961 - MER44C DNA MER2_type -38 695 3 2 1817 396 55 0 0 chrX 161515643 161515698 -5134598 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 2 1817 407 321 36 64 chrX 161515701 161515841 -5134455 - B1F SINE Alu -9 140 5 2 1817 992 249 111 36 chrX 161515912 161516245 -5134051 - Lx2B LINE L1 -10 6990 6633 3 1817 556 252 0 0 chrX 161516259 161516382 -5133914 + Lx6 LINE L1 6598 6720 -740 3 1817 1894 258 75 27 chrX 161516406 161516997 -5133299 + Lx6 LINE L1 6479 7413 -47 3 1817 1404 54 0 0 chrX 161517978 161518164 -5132132 + L1Md_F2 LINE L1 6397 6582 0 3 1817 283 273 0 0 chrX 161518285 161518351 -5131945 - ID4_ SINE ID -16 67 2 3 1817 297 97 65 0 chrX 161518401 161518463 -5131833 + CT-rich Low_complexity Low_complexity 5 70 0 3 1817 1199 41 7 0 chrX 161518922 161519068 -5131228 + B1_Mus2 SINE Alu 1 147 0 3 1817 188 185 42 84 chrX 161519282 161519353 -5130943 + L2c LINE L2 3315 3382 -5 3 1817 396 299 99 19 chrX 161519509 161519701 -5130595 - MER20 DNA MER1_type 0 219 6 3 1817 640 296 6 12 chrX 161519809 161519973 -5130323 - RSINE1 SINE B4 0 165 3 3 1817 28 0 0 0 chrX 161520283 161520311 -5129985 + AT_rich Low_complexity Low_complexity 1 28 0 4 1817 404 332 78 22 chrX 161520336 161520724 -5129572 - Lx8 LINE L1 -73 7400 6979 4 1817 620 312 111 21 chrX 161520716 161521050 -5129246 - Lx8 LINE L1 -952 6521 6158 4 1817 362 250 8 0 chrX 161521083 161521207 -5129089 - Lx9 LINE L1 -7 7637 7513 4 1817 1190 171 5 0 chrX 161521210 161521415 -5128881 + Lx9 LINE L1 6745 6950 -694 4 1817 2859 83 2 12 chrX 161521716 161522116 -5128180 + MTA_Mm LTR MaLR 1 396 0 4 1817 2551 70 40 11 chrX 161522116 161522492 -5127804 + MTA_Mm-int LTR MaLR 1 387 -711 4 1817 479 169 12 0 chrX 161522491 161522574 -5127722 + U3 snRNA snRNA 133 216 -1 4 1817 945 84 0 0 chrX 161522917 161523048 -5127248 + B1_Mm SINE Alu 15 145 -2 4 1817 332 39 58 0 chrX 161523048 161523100 -5127196 + (CAAAA)n Simple_repeat Simple_repeat 1 55 0 4 1817 4062 140 127 19 chrX 161523103 161523896 -5126400 + MTA_Mm-int LTR MaLR 380 1258 0 4 1817 3031 58 5 12 chrX 161523896 161524295 -5126001 + MTA_Mm LTR MaLR 1 396 0 4 1817 296 304 112 35 chrX 161524303 161524419 -5125877 - MLT1F LTR MaLR -122 447 323 4 1817 905 141 3 0 chrX 161524433 161524583 -5125713 - L1_Mur2 LINE L1 -579 5595 5416 4 1817 3249 177 17 5 chrX 161524588 161525245 -5125051 - L1_Mur2 LINE L1 -657 5220 4556 4 1817 9078 111 16 6 chrX 161525238 161526675 -5123621 + Lx2 LINE L1 5540 6988 -9 5 1817 33854 46 0 3 chrX 161526676 161532129 -5118167 + L1Md_T LINE L1 59 5589 -297 5 1817 8539 31 0 0 chrX 161532129 161533125 -5117171 + L1Md_T LINE L1 5590 6585 0 5 1817 183 189 0 0 chrX 161533153 161533206 -5117090 + A-rich Low_complexity Low_complexity 1 53 0 5 1817 241 308 13 0 chrX 161533275 161533353 -5116943 + MER53 DNA hAT 112 190 -3 5 1817 430 301 89 78 chrX 161533356 161533547 -5116749 - MLT1F LTR MaLR -261 287 95 4 1817 570 371 76 46 chrX 161533880 161534247 -5116049 + MLT1E1A LTR MaLR 280 657 -23 5 1817 30076 79 6 6 chrX 161534441 161539518 -5110778 + L1Md_F2 LINE L1 511 5586 -297 5 1817 7439 70 4 13 chrX 161539518 161540511 -5109785 + L1Md_F2 LINE L1 5587 6570 -12 5 1817 24 32 0 0 chrX 161540590 161540621 -5109675 + AT_rich Low_complexity Low_complexity 1 31 0 5 1817 412 250 41 15 chrX 161540815 161540993 -5109303 + Lx8 LINE L1 5694 5911 -1733 5 1817 686 270 33 169 chrX 161541360 161541815 -5108481 + Lx8 LINE L1 7042 7434 -39 5 1817 509 269 196 12 chrX 161542495 161542668 -5107628 + B3 SINE B2 1 205 -11 5 1817 1523 264 110 4 chrX 161542881 161543390 -5106906 + Lx8 LINE L1 6232 6794 -679 5 1817 686 12 12 0 chrX 161543393 161543476 -5106820 + (TTTC)n Simple_repeat Simple_repeat 4 87 0 6 1817 582 148 102 15 chrX 161543482 161543619 -5106677 - Lx7 LINE L1 -61 7635 7487 6 1817 195 114 0 0 chrX 161543620 161543655 -5106641 + (CCAA)n Simple_repeat Simple_repeat 1 35 0 6 1817 257 128 0 0 chrX 161543656 161543695 -5106601 - Lx6 LINE L1 -344 7116 7078 6 1817 536 121 55 0 chrX 161543686 161543777 -5106519 - Lx6 LINE L1 -1088 6372 6277 6 1817 4090 190 37 21 chrX 161544015 161544856 -5105440 + Lx4B LINE L1 6202 7055 -3 6 1817 331 287 113 31 chrX 161545444 161545633 -5104663 + MLT1H2 LTR MaLR 72 314 -235 6 1817 306 325 26 0 chrX 161545722 161545799 -5104497 - Charlie12 DNA MER1_type -2794 79 1 6 1817 252 282 0 0 chrX 161545890 161545961 -5104335 + MLT1H2 LTR MaLR 478 548 0 6 1817 274 316 60 54 chrX 161546015 161546182 -5104114 + L1MC4 LINE L1 7563 7730 -312 6 1817 390 408 0 59 chrX 161546322 161546465 -5103831 + B4A SINE B4 102 233 -59 6 1817 1194 194 14 5 chrX 161546465 161546688 -5103608 + URR1B DNA MER1_type 1 225 0 6 1817 390 408 0 59 chrX 161546688 161546747 -5103549 + B4A SINE B4 234 292 0 6 1817 237 139 0 0 chrX 161546752 161546795 -5103501 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1817 220 204 0 0 chrX 161546925 161546969 -5103327 + GA-rich Low_complexity Low_complexity 5 48 0 7 1817 228 174 111 71 chrX 161546981 161547080 -5103216 + L1MC4 LINE L1 7938 8040 -2 7 1817 1410 75 11 0 chrX 161547176 161547364 -5102932 - B2_Mm1t SINE B2 -3 190 1 7 1817 219 36 0 0 chrX 161547959 161547987 -5102309 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 1817 3271 51 2 0 chrX 161548447 161548842 -5101454 + MTA_Mm LTR MaLR 1 396 0 7 1817 514 328 101 28 chrX 161548868 161549240 -5101056 - L1ME3A LINE L1 -56 6117 5722 7 1817 2113 156 29 47 chrX 161549240 161549623 -5100673 + ORR1C1 LTR MaLR 1 376 -2 7 1817 514 328 101 28 chrX 161549623 161549746 -5100550 - L1ME3A LINE L1 -452 5721 5586 7 1817 240 35 0 0 chrX 161549938 161549967 -5100329 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 7 1817 325 313 40 0 chrX 161549967 161550066 -5100230 - PB1D10 SINE Alu -11 106 4 7 1817 26 0 0 27 chrX 161550682 161550702 -5099594 + AT_rich Low_complexity Low_complexity 1 20 0 8 1817 6502 132 8 11 chrX 161550702 161551704 -5098592 - Lx4A LINE L1 0 7058 6060 8 1817 26 0 0 27 chrX 161551704 161551720 -5098576 + AT_rich Low_complexity Low_complexity 1 16 0 8 1817 423 83 0 0 chrX 161552937 161552997 -5097299 + (CA)n Simple_repeat Simple_repeat 2 61 0 8 1817 3667 237 34 2 chrX 161553046 161553980 -5096316 + Lx7 LINE L1 5583 6523 -1173 8 1817 1614 248 87 51 chrX 161553998 161554504 -5095792 + RMER19C LTR ERVK 88 611 0 8 1817 3815 226 50 47 chrX 161554504 161555465 -5094831 + Lx6 LINE L1 6497 7460 0 8 1817 246 333 70 0 chrX 161555787 161555901 -5094395 + MER57E1 LTR ERV1 246 367 -5 8 1817 475 326 83 21 chrX 161556688 161556929 -5093367 - MIR SINE MIR -2 260 5 8 1817 437 270 155 19 chrX 161557001 161557156 -5093140 + MLT1C LTR MaLR 6 181 -286 8 1817 878 286 9 28 chrX 161557151 161557367 -5092929 + B4 SINE B4 7 218 -74 9 1817 854 184 0 6 chrX 161557373 161557553 -5092743 + GA-rich Low_complexity Low_complexity 2 180 0 9 1817 236 327 0 18 chrX 161557558 161557614 -5092682 + B4 SINE B4 229 283 -9 9 1817 328 333 77 29 chrX 161557702 161557909 -5092387 + MLT1C LTR MaLR 213 429 -38 8 1817 228 298 101 42 chrX 161558337 161558456 -5091840 - Lx8 LINE L1 -299 7174 7049 9 1817 245 378 17 8 chrX 161558578 161558698 -5091598 + MIR SINE MIR 12 132 -130 9 1817 195 270 105 26 chrX 161559003 161559079 -5091217 - MIR SINE MIR -92 170 89 9 1817 930 280 31 23 chrX 161559241 161559501 -5090795 - Lx9 LINE L1 -779 6865 6604 9 1817 815 166 18 47 chrX 161559760 161559931 -5090365 - Lx9 LINE L1 -192 7452 7287 9 1817 270 114 91 0 chrX 161559931 161559975 -5090321 + Lx9 LINE L1 7212 7259 -385 9 1817 623 273 105 0 chrX 161560093 161560331 -5089965 + L1MA4 LINE L1 5680 5942 -358 9 1817 262 288 27 0 chrX 161560923 161560996 -5089300 + ID2 SINE ID 5 79 -4 9 1817 308 254 76 42 chrX 161561154 161561298 -5088998 + LTR37B LTR ERV1 319 467 -1 9 1817 351 0 0 0 chrX 161561317 161561356 -5088940 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1817 632 252 81 34 chrX 161561384 161561593 -5088703 + ERVL-E-int LTR ERVL 4829 5047 -620 1 1817 258 197 66 0 chrX 161561611 161561672 -5088624 - Lx9 LINE L1 -490 6164 6100 9 1817 1103 93 0 0 chrX 161561672 161561834 -5088462 + L1_Mus2 LINE L1 6400 6561 -5 1 1817 360 0 0 0 chrX 161562252 161562292 -5088004 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1817 445 372 25 10 chrX 161562319 161562520 -5087776 + MER58A DNA MER1_type 21 224 0 1 1817 265 292 100 11 chrX 161562661 161562751 -5087545 - L2 LINE L2 -521 2898 2801 1 1817 31 0 0 0 chrX 161562942 161562973 -5087323 + AT_rich Low_complexity Low_complexity 1 31 0 1 1817 2381 71 6 3 chrX 161562985 161563311 -5086985 - L1Md_F2 LINE L1 -11 6571 6245 1 1817 10293 65 0 9 chrX 161563311 161565630 -5084666 + L1Md_Gf LINE L1 214 2608 -3278 1 1817 441 97 0 0 chrX 161565951 161566023 -5084273 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 1817 233 217 0 88 chrX 161566023 161566114 -5084182 + (TCTCTG)n Simple_repeat Simple_repeat 1 83 0 1 1817 761 61 101 22 chrX 161566115 161566383 -5083913 + CT-rich Low_complexity Low_complexity 1 289 0 1 1817 288 336 84 23 chrX 161566427 161566558 -5083738 - B1F2 SINE Alu -9 140 2 1 1817 359 231 100 55 chrX 161566607 161566717 -5083579 - Lx8 LINE L1 -393 7080 6966 1 1817 232 200 0 48 chrX 161566739 161566802 -5083494 + Lx8 LINE L1 7407 7466 -7 1 1817 333 0 0 0 chrX 161567797 161567834 -5082462 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1817 21 0 0 0 chrX 161568664 161568685 -5081611 + AT_rich Low_complexity Low_complexity 1 21 0 1 1817 210 128 0 0 chrX 161568845 161568884 -5081412 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 1 1817 1348 326 87 28 chrX 161570226 161570970 -5079326 - Lx9 LINE L1 -33 7611 6824 1 1817 288 319 112 25 chrX 161571508 161571704 -5078592 + L1_Mur3 LINE L1 619 831 -6897 1 1817 879 281 80 16 chrX 161571920 161572478 -5077818 + L1_Mur3 LINE L1 828 1423 -4457 1 1817 197 367 53 33 chrX 161572801 161572953 -5077343 + MIR3 SINE MIR 5 159 -49 1 1817 188 292 133 11 chrX 161573029 161573119 -5077177 + MER5B DNA MER1_type 78 178 0 1 1817 387 0 0 0 chrX 161573797 161573840 -5076456 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1817 1098 77 0 0 chrX 161573844 161573987 -5076309 - B1_Mus1 SINE Alu -5 143 1 1 1817 234 0 0 0 chrX 161575180 161575206 -5075090 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 1817 204 385 21 10 chrX 161575301 161575398 -5074898 - MIRb SINE MIR -131 137 40 1 1817 230 213 25 62 chrX 161575709 161575789 -5074507 - MT2B2 LTR ERVL -333 251 175 1 1817 378 276 73 66 chrX 161575857 161575993 -5074303 - L2a LINE L2 0 3426 3290 1 1817 8900 105 12 29 chrX 161576132 161577933 -5072363 + Lx3B LINE L1 5210 6970 -3 1 1817 306 0 0 0 chrX 161577943 161577977 -5072319 + (ATG)n Simple_repeat Simple_repeat 2 35 0 1 1817 300 339 88 50 chrX 161578411 161578623 -5071673 + MLT1G LTR MaLR 55 248 -307 1 1817 514 316 52 31 chrX 161578685 161578897 -5071399 + MLT1G LTR MaLR 351 649 -5 1 1817 387 329 131 14 chrX 161578921 161579143 -5071153 + MLT1G-int LTR MaLR 38 285 -1124 1 1817 286 361 18 44 chrX 161579166 161579392 -5070904 + MLT1G-int LTR MaLR 549 768 -721 1 1817 273 242 77 48 chrX 161579407 161579511 -5070785 - PB1D10 SINE Alu -7 110 4 1 1817 663 221 104 21 chrX 161579522 161579762 -5070534 - L1MA7 LINE L1 -2 6289 6030 1 1817 906 334 110 18 chrX 161579762 161580262 -5070034 + MLT1G-int LTR MaLR 767 1312 -177 1 1817 1139 322 87 81 chrX 161580546 161581124 -5069172 + MLT1G LTR MaLR 15 595 0 1 1817 1251 109 11 21 chrX 161581256 161581443 -5068853 - B2_Mm1t SINE B2 -8 185 1 1 1817 423 158 66 0 chrX 161581463 161581539 -5068757 + Lx9 LINE L1 7385 7465 -179 1 1817 357 24 0 0 chrX 161581542 161581584 -5068712 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1817 591 163 0 30 chrX 161581584 161581717 -5068579 + Lx9 LINE L1 7515 7643 -1 1 1817 603 273 48 30 chrX 161581749 161581915 -5068381 + B3 SINE B2 2 170 -46 1 1817 510 31 0 0 chrX 161581930 161581994 -5068302 + (TCTCTG)n Simple_repeat Simple_repeat 3 66 0 1 1817 317 22 0 0 chrX 161582813 161582858 -5067438 + L1Md_F3 LINE L1 6528 6572 -12 1 1817 330 292 39 55 chrX 161584544 161584671 -5065625 - MTEa LTR MaLR -2 377 253 1 1817 323 163 72 117 chrX 161584591 161584813 -5065483 - RMER17D LTR ERVK -372 517 306 1 1817 428 267 171 59 chrX 161584785 161584972 -5065324 - MTEa LTR MaLR -159 220 13 1 1817 816 275 50 5 chrX 161585054 161585255 -5065041 + MTE2b LTR MaLR 170 379 0 1 1817 303 343 50 50 chrX 161585399 161585580 -5064716 - MER20 DNA MER1_type -21 198 18 1 1817 180 0 0 0 chrX 161586031 161586051 -5064245 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1 1817 225 316 87 5 chrX 161587007 161587119 -5063177 + MIRb SINE MIR 43 161 -115 1 1817 278 362 79 67 chrX 161587575 161587916 -5062380 + L3 LINE CR1 4057 4401 -88 1 1817 2921 35 0 0 chrX 161589708 161590055 -5060241 - L1Md_A LINE L1 -525 6057 5711 1 1817 4332 34 0 0 chrX 161590055 161590563 -5059733 + L1Md_T LINE L1 6072 6579 -3 1 1817 824 278 105 16 chrX 161590623 161590996 -5059300 + L1MA9 LINE L1 5904 6309 -3 1 1817 221 276 38 38 chrX 161591286 161591365 -5058931 - MIRm SINE MIR -2 274 196 1 1817 396 281 16 100 chrX 161592709 161592899 -5057397 - MER20 DNA MER1_type -45 174 1 1 1817 251 225 136 61 chrX 161594307 161594454 -5055842 + ORR1D1 LTR MaLR 216 373 -1 1 1817 238 411 109 29 chrX 161594556 161594867 -5055429 + LTR55 LTR ERV 154 489 -59 1 1817 446 329 27 0 chrX 161594923 161595069 -5055227 + MLT1D LTR MaLR 348 497 -8 1 1817 253 317 14 14 chrX 161595453 161595597 -5054699 + T-rich Low_complexity Low_complexity 5 148 0 1 1817 7252 58 5 0 chrX 161595759 161596648 -5053648 + RLTR13B1 LTR ERVK 1 893 0 1 1817 1076 88 0 13 chrX 161596661 161596810 -5053486 - B1_Mm SINE Alu 0 147 1 1 1817 384 345 61 65 chrX 161597260 161597474 -5052822 - LTR16C LTR ERVL -2 487 275 1 1817 301 241 192 43 chrX 161599069 161599303 -5050993 + L1M4 LINE L1 4312 4580 -1566 1 1817 2332 175 71 22 chrX 161599307 161599815 -5050481 - RMER16 LTR ERVK 0 533 1 1 1817 419 91 76 0 chrX 161599820 161599886 -5050410 - RMER16-int LTR ERVK -6 5400 5330 1 1817 1108 41 7 27 chrX 161600244 161600394 -5049902 + B1_Mm SINE Alu 1 147 0 1 1817 618 280 46 42 chrX 161600994 161601210 -5049086 - MER20 DNA MER1_type -2 217 1 1 1817 587 305 60 60 chrX 161601881 161602146 -5048150 - B4A SINE B4 -27 265 1 1 1817 358 333 48 73 chrX 161602370 161602642 -5047654 + MER90a LTR ERV1 190 454 -160 1 1817 303 297 0 51 chrX 161602844 161602922 -5047374 + ID4 SINE ID 4 77 -6 1 1817 722 148 6 0 chrX 161602933 161603095 -5047201 + GA-rich Low_complexity Low_complexity 2 164 0 1 1817 758 192 209 0 chrX 161603620 161603807 -5046489 - URR1A DNA MER1_type 0 226 1 1 1817 374 239 335 0 chrX 161603920 161604075 -5046221 - B3 SINE B2 -9 207 1 1 1817 402 21 0 0 chrX 161604263 161604310 -5045986 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 1817 252 215 194 0 chrX 161604311 161604404 -5045892 - Lx2B LINE L1 -22 6978 6868 1 1817 1661 201 12 3 chrX 161604477 161604812 -5045484 - Lx3C LINE L1 -131 6845 6508 1 1817 23 33 0 0 chrX 161605600 161605630 -5044666 + AT_rich Low_complexity Low_complexity 1 30 0 1 1817 276 163 65 0 chrX 161605685 161605777 -5044519 + (CACCAT)n Simple_repeat Simple_repeat 4 101 0 1 1817 180 0 0 0 chrX 161605777 161605797 -5044499 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 1817 278 266 90 18 chrX 161605841 161605952 -5044344 - RSINE1 SINE B4 -42 123 5 1 1817 194 310 72 1 chrX 161607086 161607173 -5043123 + MIR SINE MIR 82 167 -95 1 1817 499 304 243 55 chrX 161607278 161607681 -5042615 - BLACKJACK DNA AcHobo -2228 716 238 1 1817 343 338 117 0 chrX 161607703 161607848 -5042448 - BLACKJACK DNA AcHobo -2773 171 10 1 1817 1041 276 57 67 chrX 161608109 161608497 -5041799 + Lx8 LINE L1 6948 7331 -142 1 1817 498 345 87 28 chrX 161608600 161608958 -5041338 + L2 LINE L2 2268 2646 -773 1 1817 246 371 24 0 chrX 161608955 161609079 -5041217 + L2a LINE L2 3300 3426 0 1 1817 217 311 0 16 chrX 161609091 161609153 -5041143 + L2 LINE L2 2648 2708 -711 1 1817 738 248 82 46 chrX 161609192 161609521 -5040775 - RLTR15 LTR ERVK -18 341 1 1 1817 265 326 123 47 chrX 161610001 161610348 -5039948 - L1MEc LINE L1 -3028 3291 2933 1 1817 1017 258 122 34 chrX 161610348 161610733 -5039563 + MTD LTR MaLR 1 419 0 1 1817 265 326 123 47 chrX 161610733 161611009 -5039287 - L1MEc LINE L1 -3387 2932 2621 1 1817 420 276 10 31 chrX 161611045 161611142 -5039154 - B1F SINE Alu -29 120 26 1 1817 309 310 32 72 chrX 161611142 161611170 -5039126 - ID_B1 SINE B4 -26 198 79 1 1817 228 289 53 43 chrX 161611299 161611393 -5038903 - L1MEc LINE L1 -3979 2421 2327 1 1818 8480 150 4 10 chrX 161612115 161613571 -5036725 + Lx2B LINE L1 3689 5136 -741 1 1818 24253 96 11 4 chrX 161613567 161617823 -5032473 + L1_Mus1 LINE L1 2303 6654 0 1 1818 7251 161 56 11 chrX 161617834 161619624 -5030672 + Lx2B LINE L1 5130 7000 0 1 1818 354 139 0 0 chrX 161619666 161619738 -5030558 + (TC)n Simple_repeat Simple_repeat 1 72 0 1 1818 261 57 0 0 chrX 161619738 161619773 -5030523 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1818 322 304 25 25 chrX 161620183 161620301 -5029995 - MER5B DNA MER1_type -59 119 2 1 1818 891 206 87 10 chrX 161620459 161620665 -5029631 + URR1A DNA MER1_type 5 226 0 1 1818 1030 60 75 0 chrX 161620827 161620961 -5029335 + B1_Mm SINE Alu 1 144 -3 1 1818 345 47 0 0 chrX 161620961 161621004 -5029292 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 1818 324 0 0 0 chrX 161621065 161621101 -5029195 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 1 1818 251 156 0 0 chrX 161621117 161621162 -5029134 + B1_Mm SINE Alu 100 144 -3 1 1818 243 0 0 0 chrX 161621162 161621189 -5029107 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 1818 577 241 72 6 chrX 161621191 161621358 -5028938 - MER53 DNA hAT -5 188 11 1 1818 693 294 82 19 chrX 161621880 161622199 -5028097 + L1MA6 LINE L1 5914 6252 -48 1 1818 24 0 0 0 chrX 161622333 161622357 -5027939 + AT_rich Low_complexity Low_complexity 1 24 0 1 1818 333 301 176 5 chrX 161622624 161622811 -5027485 - MIR SINE MIR -30 232 14 1 1818 234 234 0 47 chrX 161622934 161623019 -5027277 - L1M5 LINE L1 -365 5759 5679 1 1818 1125 148 119 0 chrX 161623143 161623345 -5026951 + URR1A DNA MER1_type 1 226 0 2 1818 323 296 28 85 chrX 161623394 161623571 -5026725 + MIR SINE MIR 96 262 0 2 1818 21 0 0 0 chrX 161623668 161623689 -5026607 + AT_rich Low_complexity Low_complexity 1 21 0 2 1818 237 129 126 21 chrX 161623709 161623804 -5026492 - Lx9 LINE L1 -17 7627 7523 2 1818 288 0 0 0 chrX 161623807 161623839 -5026457 + (TC)n Simple_repeat Simple_repeat 1 32 0 2 1818 351 0 0 0 chrX 161623839 161623877 -5026419 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1818 3771 165 90 31 chrX 161623877 161624714 -5025582 + RMER17D LTR ERVK 2 887 -2 2 1818 726 298 38 24 chrX 161624729 161625018 -5025278 - Lx9 LINE L1 -188 7456 7164 2 1818 618 121 78 7 chrX 161625502 161625644 -5024652 + Lx9 LINE L1 7492 7643 -1 2 1818 457 214 123 31 chrX 161626616 161626714 -5023582 - PB1D10 SINE Alu -5 122 22 2 1818 449 333 23 8 chrX 161626739 161626872 -5023424 + RSINE1 SINE B4 5 139 -26 2 1818 474 18 0 0 chrX 161626879 161626934 -5023362 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1818 351 0 0 0 chrX 161626934 161626972 -5023324 + (GA)n Simple_repeat Simple_repeat 2 40 0 2 1818 703 338 61 9 chrX 161627166 161627378 -5022918 + MER58A DNA MER1_type 1 223 -1 2 1818 2131 141 122 4 chrX 161628430 161628940 -5021356 - Lx2 LINE L1 0 7000 6347 2 1818 500 318 96 20 chrX 161629334 161629533 -5020763 + MER20 DNA MER1_type 1 214 -5 2 1818 23 33 0 0 chrX 161630100 161630130 -5020166 + AT_rich Low_complexity Low_complexity 1 30 0 2 1818 643 224 169 22 chrX 161630144 161630327 -5019969 + 7SLRNA srpRNA srpRNA 30 239 -75 2 1818 422 257 29 10 chrX 161631143 161631245 -5019051 - B4A SINE B4 -6 286 183 2 1818 264 30 0 0 chrX 161632381 161632414 -5017882 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1818 229 233 0 0 chrX 161632479 161632522 -5017774 + MIRc SINE MIR 94 136 -132 2 1818 323 299 38 81 chrX 161633459 161633619 -5016677 + ID_B1 SINE B4 2 154 -70 2 1818 1202 223 149 19 chrX 161634004 161634320 -5015976 + ORR1D1 LTR MaLR 10 366 -8 2 1818 306 0 0 0 chrX 161635176 161635210 -5015086 + (CAAAC)n Simple_repeat Simple_repeat 4 37 0 2 1818 342 318 80 68 chrX 161635988 161636238 -5014058 + MIR SINE MIR 9 261 -1 2 1818 203 347 135 50 chrX 161637785 161637985 -5012311 - L2c LINE L2 -8 3379 3163 2 1818 276 152 0 0 chrX 161638110 161638176 -5012120 + GA-rich Low_complexity Low_complexity 1 66 0 2 1818 299 321 8 84 chrX 161638701 161638820 -5011476 + PB1D10 SINE Alu 1 110 -7 2 1818 261 0 0 0 chrX 161639013 161639042 -5011254 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2 1818 488 215 16 8 chrX 161639116 161639238 -5011058 + L1M2 LINE L1 5546 5668 -623 2 1818 6000 76 58 30 chrX 161639266 161640161 -5010135 + L1Md_T LINE L1 5663 6582 0 2 1818 30 27 0 0 chrX 161640286 161640323 -5009973 + AT_rich Low_complexity Low_complexity 1 37 0 2 1818 291 348 25 75 chrX 161641212 161641451 -5008845 - MLT1A LTR MaLR -4 370 144 2 1818 419 281 31 139 chrX 161641712 161641906 -5008390 - ORR1E LTR MaLR -186 173 1 2 1818 683 262 42 18 chrX 161641906 161642062 -5008234 - MTE-int LTR MaLR -53 1527 1368 2 1818 227 333 24 12 chrX 161644166 161644251 -5006045 - L2c LINE L2 -40 3347 3262 2 1818 777 272 88 56 chrX 161644255 161644687 -5005609 - Lx9 LINE L1 -106 7538 7093 2 1818 541 361 18 14 chrX 161645226 161645445 -5004851 - MER58A DNA MER1_type -1 223 4 2 1818 4349 58 7 5 chrX 161645509 161646077 -5004219 - L1Md_F2 LINE L1 -3 6579 6011 2 1818 23 33 0 0 chrX 161647164 161647194 -5003102 + AT_rich Low_complexity Low_complexity 1 30 0 2 1818 706 209 25 5 chrX 161647383 161647556 -5002740 - B3 SINE B2 -7 191 7 2 1818 185 360 134 41 chrX 161648144 161648509 -5001787 + L2a LINE L2 2975 3373 -53 2 1818 44 0 0 0 chrX 161649038 161649082 -5001214 + AT_rich Low_complexity Low_complexity 1 44 0 2 1818 369 0 0 0 chrX 161649273 161649314 -5000982 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1818 307 336 18 0 chrX 161649325 161649435 -5000861 - Lx7 LINE L1 -388 7308 7197 2 1818 309 131 0 0 chrX 161649482 161649543 -5000753 + (TCCA)n Simple_repeat Simple_repeat 4 64 0 2 1818 4450 222 26 19 chrX 161649552 161650495 -4999801 - Lx6 LINE L1 -175 7285 6336 2 1818 318 50 0 0 chrX 161650537 161650577 -4999719 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 2 1818 4770 102 117 4 chrX 161650597 161651368 -4998928 + Lx3A LINE L1 6118 6975 -6 2 1818 404 296 59 23 chrX 161651370 161651626 -4998670 + L1MA5 LINE L1 5872 6136 -164 2 1818 1690 258 79 102 chrX 161651686 161652334 -4997962 + Lx7 LINE L1 6679 7311 -385 2 1818 441 0 0 0 chrX 161652335 161652384 -4997912 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 1818 267 54 0 0 chrX 161652384 161652420 -4997876 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1818 29 0 0 0 chrX 161652599 161652628 -4997668 + AT_rich Low_complexity Low_complexity 1 29 0 2 1818 458 305 32 7 chrX 161652642 161652797 -4997499 - MER5A1 DNA MER1_type 0 166 8 2 1818 299 276 25 117 chrX 161652790 161652987 -4997309 + MT2B LTR ERVL 86 264 -337 2 1818 421 338 13 26 chrX 161652860 161652892 -4997404 + ID_B1 SINE B4 65 217 -7 2 1818 599 244 32 0 chrX 161652892 161653015 -4997281 + B1_Mur1 SINE Alu 16 142 -7 2 1818 288 0 0 0 chrX 161653015 161653047 -4997249 + (CCA)n Simple_repeat Simple_repeat 1 32 0 2 1818 499 269 16 57 chrX 161653801 161653915 -4996381 + Lx8 LINE L1 6625 6739 -734 2 1818 1215 176 18 0 chrX 161653915 161654136 -4996160 + URR1B DNA MER1_type 1 225 0 2 1818 499 269 16 57 chrX 161654136 161654214 -4996082 + Lx8 LINE L1 6740 6809 -664 2 1818 252 331 66 40 chrX 161654602 161654753 -4995543 - MLT1B LTR MaLR -221 169 15 2 1818 180 111 0 0 chrX 161654812 161654839 -4995457 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 1818 306 106 0 0 chrX 161654952 161654999 -4995297 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 1818 1014 56 120 0 chrX 161655291 161655433 -4994863 + L1_Mus1 LINE L1 6407 6565 -2 2 1818 1635 16 0 0 chrX 161655433 161655616 -4994680 + L1Md_F2 LINE L1 5403 5585 -298 2 1818 8320 36 2 0 chrX 161655617 161656610 -4993686 + L1Md_F2 LINE L1 5587 6581 -1 2 1818 246 62 0 0 chrX 161656665 161656697 -4993599 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 1818 378 129 0 0 chrX 161657076 161657138 -4993158 + (TGG)n Simple_repeat Simple_repeat 1 62 0 2 1818 1248 234 8 28 chrX 161658406 161658762 -4991534 + L1_Rod LINE L1 742 1090 -6518 2 1818 7285 226 78 26 chrX 161658758 161659363 -4990933 + L1_Rod LINE L1 1454 2088 -3759 2 1818 270 0 0 0 chrX 161659363 161659393 -4990903 + (CAA)n Simple_repeat Simple_repeat 3 32 0 2 1818 7285 226 78 26 chrX 161659393 161660377 -4989919 + L1_Rod LINE L1 2089 3116 -2731 2 1818 270 81 0 0 chrX 161660377 161660414 -4989882 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2 1818 7285 226 78 26 chrX 161660414 161660521 -4989775 + L1_Rod LINE L1 3117 3235 -2612 2 1818 594 0 0 0 chrX 161660521 161660587 -4989709 + (GAAA)n Simple_repeat Simple_repeat 1 66 0 2 1818 7285 226 78 26 chrX 161660587 161660987 -4989309 + L1_Rod LINE L1 3236 3657 -2190 2 1818 180 0 0 0 chrX 161660987 161661007 -4989289 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 1818 7285 226 78 26 chrX 161661007 161661168 -4989128 + L1_Rod LINE L1 3658 3829 -2018 2 1818 441 0 0 0 chrX 161661168 161661217 -4989079 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1818 1021 262 76 0 chrX 161661221 161661484 -4988812 + Lx6 LINE L1 6464 6746 -714 2 1818 241 347 58 25 chrX 161662491 161662612 -4987684 + MIR SINE MIR 18 142 -120 2 1818 256 66 0 110 chrX 161662870 161663024 -4987272 + (CTATA)n Simple_repeat Simple_repeat 4 140 0 2 1818 183 80 0 0 chrX 161663088 161663113 -4987183 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 1818 288 201 44 22 chrX 161663175 161663312 -4986984 + (TA)n Simple_repeat Simple_repeat 2 141 0 2 1818 3306 154 15 4 chrX 161664665 161665207 -4985089 + Lx4A LINE L1 6500 7047 -11 2 1818 23 54 0 0 chrX 161665460 161665497 -4984799 + AT_rich Low_complexity Low_complexity 1 37 0 2 1818 471 113 0 0 chrX 161665669 161665740 -4984556 + (CATA)n Simple_repeat Simple_repeat 2 72 0 2 1818 296 217 59 0 chrX 161665786 161665894 -4984402 - Lx8 LINE L1 -403 5897 5778 2 1818 213 158 26 0 chrX 161666021 161666059 -4984237 + ID SINE ID 5 43 -181 2 1818 668 329 80 62 chrX 161666937 161667310 -4982986 - MLT1E3 LTR MaLR -2 622 243 2 1818 319 179 0 18 chrX 161667357 161667414 -4982882 - ID_B1 SINE B4 -53 171 116 2 1818 284 291 12 12 chrX 161667510 161667590 -4982706 - MLT1E3 LTR MaLR -410 217 138 2 1818 1963 163 88 6 chrX 161669388 161669739 -4980557 + ORR1B1 LTR MaLR 1 380 -14 2 1818 186 339 0 16 chrX 161670432 161670495 -4979801 - L2a LINE L2 -1 3425 3364 2 1818 1202 184 14 0 chrX 161670495 161670712 -4979584 + URR1B DNA MER1_type 5 224 -1 2 1818 1185 214 63 35 chrX 161671826 161672145 -4978151 - MER46C DNA MER2_type -10 328 1 2 1818 530 29 15 0 chrX 161672361 161672429 -4977867 + (TC)n Simple_repeat Simple_repeat 1 69 0 2 1818 354 23 0 0 chrX 161672429 161672472 -4977824 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1818 246 32 0 0 chrX 161672474 161672505 -4977791 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 2 1818 707 284 72 54 chrX 161672576 161672963 -4977333 - L1MC3 LINE L1 -231 7554 7161 2 1818 638 295 0 0 chrX 161672966 161673105 -4977191 - B1_Mur1 SINE Alu -8 141 3 2 1818 385 309 55 88 chrX 161673106 161673436 -4976860 - L1MC3 LINE L1 -612 7173 6855 2 1818 3528 186 32 24 chrX 161674985 161675296 -4975000 + RMER6D LTR ERVK 1 326 -394 2 1818 843 67 37 0 chrX 161675296 161675430 -4974866 + L1_Mus3 LINE L1 6490 6628 -10 2 1818 3528 186 32 24 chrX 161675430 161675828 -4974468 + RMER6D LTR ERVK 327 716 -4 2 1818 387 302 103 0 chrX 161676022 161676148 -4974148 + MER58B DNA MER1_type 180 318 -23 2 1818 269 229 0 0 chrX 161676747 161676795 -4973501 + L1MEc LINE L1 36 83 -6317 2 1818 232 326 66 29 chrX 161676861 161676997 -4973299 + L1MEc LINE L1 102 242 -6158 2 1818 277 296 0 0 chrX 161677208 161677289 -4973007 + Lx9 LINE L1 6318 6398 -1246 2 1818 1723 182 73 12 chrX 161677293 161677637 -4972659 + ORR1B1 LTR MaLR 30 394 0 2 1818 4237 222 65 75 chrX 161677637 161677806 -4972490 + Lx9 LINE L1 6393 6590 -1054 2 1818 3027 113 24 2 chrX 161677806 161678258 -4972038 + Lx3C LINE L1 6514 6975 -1 2 1818 4237 222 65 75 chrX 161678258 161679352 -4970944 + Lx9 LINE L1 6591 7642 -2 2 1818 444 288 102 16 chrX 161679384 161679751 -4970545 + L1M3 LINE L1 4311 4704 -1439 3 1818 398 279 128 47 chrX 161679810 161680021 -4970275 + L1M3 LINE L1 5343 5570 -730 3 1818 245 271 156 0 chrX 161680135 161680231 -4970065 - L1M5 LINE L1 -585 5859 5749 3 1818 1568 48 0 0 chrX 161680399 161680587 -4969709 - B2_Mm1a SINE B2 -4 189 2 3 1818 526 47 0 0 chrX 161680614 161680678 -4969618 - L1_Mus1 LINE L1 -389 6177 6114 3 1818 2815 57 35 0 chrX 161680678 161681047 -4969249 + L1_Mus1 LINE L1 6174 6555 -12 3 1818 252 0 0 0 chrX 161681051 161681079 -4969217 + (GAA)n Simple_repeat Simple_repeat 1 28 0 3 1818 576 73 94 0 chrX 161681665 161681761 -4968535 + L1_Mus2 LINE L1 6462 6566 0 3 1818 369 165 191 19 chrX 161681776 161681881 -4968415 + RCHARR1 DNA MER1_type 709 831 -143 3 1818 439 344 64 19 chrX 161682196 161682520 -4967776 - L2a LINE L2 -263 3163 2828 3 1818 347 302 131 8 chrX 161682547 161682677 -4967619 + MLT1E3 LTR MaLR 479 624 0 3 1818 464 238 0 30 chrX 161682996 161683130 -4967166 + Lx6 LINE L1 7325 7454 -6 3 1818 443 219 0 0 chrX 161683817 161683899 -4966397 - B1_Mur3 SINE Alu -62 87 6 3 1818 194 398 18 9 chrX 161685926 161686035 -4964261 - L2a LINE L2 -1 3425 3316 3 1818 1604 198 71 6 chrX 161686219 161686584 -4963712 + Lx9 LINE L1 7249 7637 -7 3 1818 183 340 60 80 chrX 161687391 161687541 -4962755 - MIRb SINE MIR -26 242 96 3 1818 22 0 0 0 chrX 161688970 161688992 -4961304 + AT_rich Low_complexity Low_complexity 1 22 0 3 1818 183 146 0 0 chrX 161690757 161690798 -4959498 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 3 1818 483 264 368 0 chrX 161690827 161691039 -4959257 - B4A SINE B4 -2 290 1 3 1818 771 265 52 5 chrX 161692902 161693114 -4957182 + ID_B1 SINE B4 1 222 -2 3 1818 274 302 0 0 chrX 161694472 161694535 -4955761 - ID4 SINE ID -6 77 15 3 1818 276 30 0 0 chrX 161694581 161694614 -4955682 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 3 1818 235 49 49 0 chrX 161695698 161695739 -4954557 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1818 27 0 0 0 chrX 161696848 161696875 -4953421 + AT_rich Low_complexity Low_complexity 1 27 0 3 1818 599 234 63 22 chrX 161697172 161697395 -4952901 + L1MA7 LINE L1 6024 6255 -36 3 1818 297 0 0 0 chrX 161697396 161697429 -4952867 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 1818 22 0 0 0 chrX 161697555 161697577 -4952719 + AT_rich Low_complexity Low_complexity 1 22 0 3 1818 1420 191 204 17 chrX 161699016 161699368 -4950928 + MTC LTR MaLR 1 418 -3 3 1818 439 267 33 0 chrX 161699626 161699716 -4950580 + B3 SINE B2 1 93 -123 3 1818 21 0 0 0 chrX 161699748 161699769 -4950527 + AT_rich Low_complexity Low_complexity 1 21 0 3 1818 3027 287 95 91 chrX 161700462 161701859 -4948437 + Lx5 LINE L1 5648 7050 0 3 1818 645 226 22 0 chrX 161701941 161702078 -4948218 - B1_Mur1 SINE Alu -7 142 3 3 1818 647 233 83 0 chrX 161703586 161703719 -4946577 - B1_Mur1 SINE Alu 0 149 6 3 1818 233 314 0 97 chrX 161703620 161703733 -4946563 - MT2B LTR ERVL -344 257 156 3 1818 3489 204 44 18 chrX 161703878 161704293 -4946003 + L1VL4 LINE L1 181 597 -5705 3 1818 5328 53 3 1 chrX 161704293 161704954 -4945342 - L1_Mus1 LINE L1 0 6567 5906 3 1818 13831 118 22 20 chrX 161704954 161707471 -4942825 + L1VL4 LINE L1 598 3126 -433 3 1818 234 0 0 0 chrX 161707471 161707497 -4942799 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 1818 13831 109 20 20 chrX 161707497 161707530 -4942766 + L1VL4 LINE L1 3127 3168 -391 3 1818 358 143 11 56 chrX 161707534 161707623 -4942673 + L1_Mus4 LINE L1 4617 4701 -1182 3 1818 7335 116 15 12 chrX 161707624 161709334 -4940962 + L1_Mus4 LINE L1 4894 6615 -21 3 1818 364 305 18 136 chrX 161709386 161709606 -4940690 + RMER15 LTR ERVL 368 561 -14 3 1818 191 344 172 0 chrX 161709952 161710041 -4940255 - MIRc SINE MIR -147 121 23 3 1818 562 133 9 71 chrX 161710429 161710542 -4939754 + URR1B DNA MER1_type 89 194 -31 3 1818 898 334 73 29 chrX 161712650 161713063 -4937233 + MT2A LTR ERVL 1 431 -102 3 1818 323 287 159 42 chrX 161713119 161713308 -4936988 + MTD LTR MaLR 209 419 0 3 1818 845 258 62 144 chrX 161713835 161714225 -4936071 + MTE2a LTR MaLR 21 378 -1 3 1818 378 0 0 0 chrX 161714528 161714570 -4935726 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1818 9287 171 54 6 chrX 161716183 161718015 -4932281 + L1_Mur2 LINE L1 2683 4598 -1279 3 1818 5817 122 26 22 chrX 161718015 161718967 -4931329 + RMER17B LTR ERVK 3 958 0 3 1818 9287 171 54 6 chrX 161718967 161718996 -4931300 + L1_Mur2 LINE L1 4599 4633 -1244 3 1818 207 0 0 0 chrX 161718996 161719019 -4931277 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1818 9287 171 54 6 chrX 161719019 161719041 -4931255 + L1_Mur2 LINE L1 4634 4655 -1222 3 1818 727 320 4 42 chrX 161719039 161719100 -4931196 + Lx5 LINE L1 6819 6871 -179 3 1818 1025 78 7 0 chrX 161719100 161719254 -4931042 + L1_Mus4 LINE L1 6478 6632 -4 3 1818 727 320 4 42 chrX 161719254 161719430 -4930866 + Lx5 LINE L1 6872 7047 -3 3 1818 22 56 0 0 chrX 161723103 161723139 -4927157 + AT_rich Low_complexity Low_complexity 1 36 0 3 1818 426 242 77 15 chrX 161725094 161725224 -4925072 + MLT1A0 LTR MaLR 228 365 0 3 1818 637 299 69 11 chrX 161725340 161725529 -4924767 + MER58A DNA MER1_type 22 221 -3 3 1818 21 0 0 0 chrX 161726847 161726868 -4923428 + AT_rich Low_complexity Low_complexity 1 21 0 3 1818 411 21 0 0 chrX 161728103 161728151 -4922145 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1818 594 0 0 0 chrX 161728397 161728463 -4921833 + (TTTTG)n Simple_repeat Simple_repeat 2 67 0 3 1818 515 319 82 26 chrX 161729208 161729475 -4920821 + B4 SINE B4 5 286 -6 3 1818 189 0 0 0 chrX 161729595 161729616 -4920680 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 3 1818 1031 71 14 7 chrX 161729618 161729759 -4920537 - B1_Mus1 SINE Alu -6 142 1 3 1818 277 190 305 17 chrX 161729993 161730111 -4920185 - MIR SINE MIR 0 262 111 3 1818 368 196 116 32 chrX 161730120 161730215 -4920081 + MTD LTR MaLR 1 103 -316 3 1818 225 143 0 0 chrX 161730746 161730788 -4919508 + L1M4 LINE L1 2407 2448 -3698 3 1818 808 253 48 0 chrX 161730824 161731010 -4919286 - B3A SINE B2 -3 195 1 3 1818 601 334 7 47 chrX 161731298 161731520 -4918776 + B4 SINE B4 78 292 0 3 1818 359 304 16 5 chrX 161731552 161731737 -4918559 + L1M3 LINE L1 4375 4561 -1579 3 1818 210 337 24 0 chrX 161731786 161731869 -4918427 + GA-rich Low_complexity Low_complexity 4 88 0 3 1818 302 42 0 41 chrX 161732329 161732378 -4917918 + (TTTTG)n Simple_repeat Simple_repeat 4 50 0 3 1818 1950 231 57 7 chrX 161733743 161734184 -4916112 + Lx7 LINE L1 6954 7416 -280 3 1818 180 111 0 0 chrX 161734185 161734212 -4916084 + (CATG)n Simple_repeat Simple_repeat 2 28 0 3 1818 382 197 83 45 chrX 161734236 161734369 -4915927 + Lx7 LINE L1 7559 7696 0 3 1818 32 26 0 0 chrX 161735222 161735261 -4915035 + AT_rich Low_complexity Low_complexity 1 39 0 3 1818 7329 62 1 2 chrX 161735297 161736225 -4914071 + L1_Mus1 LINE L1 5638 6564 -3 3 1818 21 36 0 0 chrX 161736225 161736253 -4914043 + AT_rich Low_complexity Low_complexity 1 28 0 3 1818 1076 282 98 10 chrX 161736989 161737376 -4912920 + LTR37A LTR ERV1 6 426 0 3 1818 410 331 27 0 chrX 161737385 161737533 -4912763 - Lx6 LINE L1 -48 7412 7261 3 1818 764 177 215 0 chrX 161738418 161738604 -4911692 + URR1A DNA MER1_type 1 226 0 3 1818 6377 12 1 0 chrX 161738678 161739406 -4910890 + L1Md_T LINE L1 4858 5586 -297 3 1818 8014 54 0 0 chrX 161739406 161740402 -4909894 + L1Md_T LINE L1 5587 6582 0 3 1818 393 135 34 0 chrX 161740668 161740757 -4909539 + (TA)n Simple_repeat Simple_repeat 2 93 0 3 1818 2883 234 92 52 chrX 161741849 161742716 -4907580 + RMER19B LTR ERVK 1 902 0 3 227 180 350 19 19 chrX 161742759 161742864 -4907432 - L2c LINE L2 0 3387 3283 3 1819 1063 285 11 18 chrX 161743041 161743313 -4906983 + MTEa LTR MaLR 6 275 -104 3 1819 747 258 115 77 chrX 161743314 161743600 -4906696 - ORR1D1 LTR MaLR -11 363 67 3 1819 498 218 0 43 chrX 161743544 161743659 -4906637 + MTEa LTR MaLR 270 379 0 3 1819 1091 83 7 0 chrX 161743803 161743948 -4906348 + B1_Mm SINE Alu 1 146 -1 3 1819 369 171 0 0 chrX 161744299 161744387 -4905909 + A-rich Low_complexity Low_complexity 1 88 0 3 1819 180 296 0 18 chrX 161744659 161744714 -4905582 + MIRc SINE MIR 183 236 -32 3 1819 1583 87 13 4 chrX 161744913 161745144 -4905152 - L1_Mus3 LINE L1 -6 6632 6400 3 1819 2735 132 2 2 chrX 161745147 161745579 -4904717 + L1_Mm LINE L1 5071 5502 -381 3 1819 507 349 45 28 chrX 161748328 161748614 -4901682 - B4 SINE B4 0 292 2 3 1819 1408 229 39 3 chrX 161748667 161748952 -4901344 + MTD LTR MaLR 112 406 -13 3 1819 460 207 127 78 chrX 161749013 161749194 -4901102 + Lx8 LINE L1 6924 7136 -337 3 1819 457 251 138 20 chrX 161749229 161749424 -4900872 + Lx8 LINE L1 7197 7414 -59 3 1819 277 357 21 0 chrX 161750159 161750302 -4899994 - L1MA5 LINE L1 -7 6293 6148 3 1819 839 10 10 0 chrX 161751232 161751332 -4898964 + (CA)n Simple_repeat Simple_repeat 2 102 0 3 1819 266 331 109 49 chrX 161751656 161751840 -4898456 + LTR33 LTR ERVL 110 304 -211 3 1819 1441 132 30 41 chrX 161751904 161752173 -4898123 - Lx3B LINE L1 -700 6273 6008 3 1819 1106 81 0 26 chrX 161752620 161752772 -4897524 + B1_Mus1 SINE Alu 1 148 0 3 1819 282 152 0 0 chrX 161752774 161752833 -4897463 + A-rich Low_complexity Low_complexity 1 59 0 3 1819 475 206 10 0 chrX 161753129 161753231 -4897065 + Lx5 LINE L1 6930 7032 -18 3 1819 222 118 0 0 chrX 161753231 161753265 -4897031 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 3 1819 397 314 8 39 chrX 161754748 161754877 -4895419 - Lx8 LINE L1 -200 7273 7149 3 1819 846 191 0 20 chrX 161755667 161755817 -4894479 + B1_Mur3 SINE Alu 1 147 -2 3 1819 3409 158 82 5 chrX 161759900 161760536 -4889760 + Lx2 LINE L1 6313 6997 0 3 1819 263 93 0 23 chrX 161763415 161763459 -4886837 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 1819 378 91 0 0 chrX 161763678 161763733 -4886563 + (ATG)n Simple_repeat Simple_repeat 2 56 0 3 1819 21 0 0 0 chrX 161764575 161764596 -4885700 + AT_rich Low_complexity Low_complexity 1 21 0 4 1819 270 0 0 0 chrX 161765812 161765842 -4884454 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1819 218 280 0 0 chrX 161766913 161766963 -4883333 + MIR3 SINE MIR 136 185 -23 4 1819 2504 222 61 69 chrX 161768365 161769247 -4881049 - RMER17B LTR ERVK -9 899 1 4 1819 318 327 0 9 chrX 161770149 161770263 -4880033 + MIRc SINE MIR 61 169 -93 4 1819 359 319 101 7 chrX 161771610 161771749 -4878547 - Ricksha_c DNA MuDR -1301 747 596 4 1819 478 205 86 0 chrX 161771756 161771913 -4878383 - MLT2B2 LTR ERVL -372 182 1 4 1819 425 324 27 0 chrX 161773735 161773846 -4876450 + RSINE1 SINE B4 45 158 -7 4 1819 531 0 0 0 chrX 161773850 161773909 -4876387 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1819 895 331 19 45 chrX 161774120 161774585 -4875711 - L1ME3B LINE L1 -392 5848 5396 4 1819 258 56 0 0 chrX 161774745 161774781 -4875515 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 1819 32 57 0 0 chrX 161774786 161774839 -4875457 + AT_rich Low_complexity Low_complexity 1 53 0 4 1819 21 0 0 0 chrX 161775101 161775122 -4875174 + AT_rich Low_complexity Low_complexity 1 21 0 4 1819 688 279 61 75 chrX 161775529 161775956 -4874340 - L1MA6 LINE L1 -279 6021 5601 4 1819 480 297 78 70 chrX 161775981 161776238 -4874058 + MT2A LTR ERVL 1 259 -274 4 1819 350 293 109 39 chrX 161776256 161776475 -4873821 - MLT1F LTR MaLR -164 415 220 4 1819 615 48 24 0 chrX 161776509 161776592 -4873704 - L1_Mus1 LINE L1 -490 6077 5993 4 1819 3911 48 0 0 chrX 161776592 161777067 -4873229 + L1_Mus1 LINE L1 6091 6565 -2 4 1819 804 348 86 37 chrX 161777663 161778361 -4871935 + L1MEd LINE L1 511 1242 -4877 4 1819 757 221 7 0 chrX 161778407 161778552 -4871744 + B1_Mus1 SINE Alu 1 146 -2 4 1819 235 210 0 0 chrX 161778569 161778631 -4871665 + Lx3C LINE L1 6913 6974 -2 4 1819 3689 116 7 17 chrX 161778644 161779041 -4871255 - Lx4A LINE L1 -869 6189 5797 4 1819 3493 30 136 0 chrX 161779041 161779475 -4870821 - MT2_Mm LTR ERVL 0 493 1 4 1819 3689 122 8 26 chrX 161779475 161779968 -4870328 - Lx4A LINE L1 -1262 5796 5308 4 1819 5405 138 22 7 chrX 161779972 161780820 -4869476 + Lx4A LINE L1 6196 7056 -2 4 1819 371 305 104 52 chrX 161780820 161781090 -4869206 + L1MEd LINE L1 1393 1676 -4473 4 1819 1797 173 3 12 chrX 161781946 161782274 -4868022 + Lx LINE L1 6322 6646 -8 4 1819 1113 84 0 0 chrX 161782277 161782431 -4867865 + (TAGA)n Simple_repeat Simple_repeat 2 155 0 4 1819 384 22 0 0 chrX 161782874 161782919 -4867377 + (TCC)n Simple_repeat Simple_repeat 3 47 0 4 1819 213 161 0 0 chrX 161783151 161783194 -4867102 + T-rich Low_complexity Low_complexity 16 58 0 4 1819 1135 56 35 0 chrX 161783194 161783337 -4866959 - B1_Mus1 SINE Alu 0 148 1 4 1819 213 161 0 0 chrX 161783337 161783349 -4866947 + T-rich Low_complexity Low_complexity 4 15 0 4 1819 186 304 0 18 chrX 161783505 161783562 -4866734 + L4 LINE RTE 1306 1361 -668 4 1819 268 289 120 17 chrX 161783675 161783857 -4866439 - MIR SINE MIR -20 248 45 4 1819 5701 150 57 57 chrX 161784616 161785282 -4865014 - L1_Mur3 LINE L1 -1312 4568 3859 4 1819 369 0 0 0 chrX 161785282 161785323 -4864973 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1819 5701 150 57 57 chrX 161785323 161785398 -4864898 - L1_Mur3 LINE L1 -2022 3858 3799 4 1819 2837 89 22 2 chrX 161785398 161785802 -4864494 - L1_Mus3 LINE L1 -8 6630 6219 4 1819 5701 150 57 57 chrX 161785802 161786384 -4863912 - L1_Mur3 LINE L1 -2082 3798 3245 4 1819 2373 162 33 2 chrX 161786395 161786790 -4863506 - Lx3C LINE L1 -9 6967 6561 4 1819 2319 155 7 5 chrX 161786790 161787204 -4863092 + Lx3C LINE L1 6132 6546 -430 4 1819 1658 153 22 14 chrX 161787221 161787592 -4862704 - L1_Mur3 LINE L1 -2604 3276 2903 4 1819 33655 74 16 7 chrX 161787592 161793903 -4856393 - L1Md_F3 LINE L1 0 6584 212 4 1819 318 314 69 0 chrX 161793919 161794021 -4856275 - MER81 DNA AcHobo 0 114 6 4 1819 1772 54 0 0 chrX 161795502 161795724 -4854572 + MT2C_Mm LTR ERVL 1 222 -253 4 1819 460 255 20 0 chrX 161797338 161797440 -4852856 - RSINE1 SINE B4 -59 106 3 4 1819 718 261 93 43 chrX 161797462 161797710 -4852586 - L1MA4 LINE L1 -439 5861 5595 4 1819 210 37 0 0 chrX 161797710 161797737 -4852559 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 4 1819 718 261 93 43 chrX 161797737 161797833 -4852463 - L1MA4 LINE L1 -706 5594 5501 4 1819 4280 122 60 28 chrX 161798193 161798977 -4851319 - RMER17D2 LTR ERVK 0 809 1 4 1819 908 312 40 31 chrX 161799204 161799531 -4850765 - MER82 DNA MER2_type -2 651 322 4 1819 405 0 0 0 chrX 161799551 161799596 -4850700 + (TAAAA)n Simple_repeat Simple_repeat 2 46 0 4 1819 1163 267 16 68 chrX 161799602 161799972 -4850324 - MER82 DNA MER2_type -302 351 1 4 1819 1363 261 25 23 chrX 161800330 161800683 -4849613 + MLT1B LTR MaLR 29 382 -8 4 1819 198 167 0 0 chrX 161800785 161800821 -4849475 + T-rich Low_complexity Low_complexity 2 37 0 4 1819 237 98 0 0 chrX 161801023 161801064 -4849232 + (A)n Simple_repeat Simple_repeat 1 41 0 4 1819 447 287 50 75 chrX 161801180 161801201 -4849095 + CYRA11_Mm Unknown Y-chromosome 162 313 -304 4 1819 1230 159 24 19 chrX 161801201 161801412 -4848884 - URR1B DNA MER1_type -13 212 1 4 1819 23 68 0 0 chrX 161801804 161801848 -4848448 + AT_rich Low_complexity Low_complexity 1 44 0 4 1819 2176 172 69 2 chrX 161802181 161802658 -4847638 - Lx9 LINE L1 -27 7617 7109 4 1819 776 209 94 34 chrX 161802724 161802957 -4847339 - L1_Rod LINE L1 -275 5572 5326 4 1819 513 0 0 0 chrX 161804135 161804192 -4846104 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1819 414 238 9 62 chrX 161804746 161804858 -4845438 - B4 SINE B4 -1 291 186 4 1819 462 270 118 95 chrX 161805031 161805252 -4845044 + B4 SINE B4 19 244 -48 4 1819 198 0 0 0 chrX 161805269 161805291 -4845005 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 1819 814 250 0 77 chrX 161805476 161805736 -4844560 + Lx6 LINE L1 7194 7433 -27 4 1819 207 256 22 34 chrX 161805808 161805897 -4844399 + (TA)n Simple_repeat Simple_repeat 1 88 0 4 1819 317 22 0 43 chrX 161805998 161806045 -4844251 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 4 1819 420 20 0 0 chrX 161806058 161806107 -4844189 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1819 636 14 0 0 chrX 161806521 161806594 -4843702 + (GA)n Simple_repeat Simple_repeat 2 74 0 4 1819 289 114 21 84 chrX 161806925 161807068 -4843228 + CT-rich Low_complexity Low_complexity 1 134 0 4 1819 307 321 65 14 chrX 161807076 161807215 -4843081 - HAL1-3A_ME LINE L1 -419 2439 2294 4 1819 492 165 8 30 chrX 161807216 161807347 -4842949 + C-rich Low_complexity Low_complexity 2 129 0 4 1819 301 355 21 48 chrX 161808262 161808407 -4841889 - L1M5 LINE L1 -449 5724 5584 4 1819 313 306 132 10 chrX 161808478 161808658 -4841638 - L1ME2 LINE L1 -281 5883 5680 4 1819 1165 299 52 8 chrX 161808692 161809073 -4841223 + MLT1A1 LTR MaLR 7 404 -4 4 1819 295 312 35 43 chrX 161809118 161809338 -4840958 - L1ME2 LINE L1 -648 5594 5382 4 1819 5313 85 18 0 chrX 161809369 161810088 -4840208 - L1_Mus3 LINE L1 -9 6629 5898 4 1819 2634 130 28 51 chrX 161810088 161810581 -4839715 + RLTR45 LTR ERVK 1 482 0 4 1819 3784 88 25 23 chrX 161810581 161811151 -4839145 + RLTR45-int LTR ERVK 1 571 -6673 4 1819 1064 42 0 40 chrX 161811914 161812064 -4838232 + RLTR45-int LTR ERVK 549 692 -6552 4 1819 1731 50 0 0 chrX 161812421 161812640 -4837656 + RLTR45-int LTR ERVK 692 910 -6334 4 1819 736 115 15 0 chrX 161812749 161812879 -4837417 + RLTR45-int LTR ERVK 902 1033 -6211 4 1819 298 325 41 41 chrX 161813271 161813492 -4836804 + SRV_MM-int LTR ERVK 2324 2544 -3623 4 1819 2959 39 6 3 chrX 161813592 161813955 -4836341 - L1Md_F3 LINE L1 0 6584 6221 4 1819 1355 55 0 57 chrX 161813955 161814147 -4836149 + RLTR45-int LTR ERVK 1465 1645 -5599 4 1819 2726 57 4 143 chrX 161814287 161814740 -4835556 - RLTR10 LTR ERVK 0 390 1 4 1819 7359 93 6 1 chrX 161814955 161816094 -4834202 + RLTR45-int LTR ERVK 6331 7761 -456 4 1819 8990 114 5 0 chrX 161816114 161817496 -4832800 - L1_Mm LINE L1 -2 5881 4493 4 1819 564 15 0 0 chrX 161817819 161817884 -4832412 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 1819 4775 133 41 11 chrX 161817942 161818780 -4831516 - Lx2A LINE L1 -93 6915 6053 4 1819 225 0 0 0 chrX 161819011 161819036 -4831260 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1819 414 311 70 0 chrX 161819153 161819394 -4830902 - L1MA4 LINE L1 -381 5919 5662 4 1819 372 59 0 0 chrX 161820039 161820090 -4830206 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1819 423 0 0 0 chrX 161820090 161820136 -4830160 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1819 198 0 0 0 chrX 161820989 161821011 -4829285 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 4 1819 371 342 75 42 chrX 161821221 161821529 -4828767 - Charlie23a DNA MER1_type -21 318 1 4 1819 1210 55 37 0 chrX 161822583 161822746 -4827550 + L1Md_F2 LINE L1 5417 5585 -298 4 1819 7929 53 8 7 chrX 161822747 161823740 -4826556 + L1Md_F2 LINE L1 5587 6580 -2 4 1819 2144 153 18 36 chrX 161824235 161824628 -4825668 + ORR1B1 LTR MaLR 1 386 -8 4 1819 28644 107 16 25 chrX 161824710 161829492 -4820804 + L1Md_F2 LINE L1 1 4734 -1149 4 1819 186 43 0 0 chrX 161829492 161829515 -4820781 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1819 28644 84 13 21 chrX 161829515 161830355 -4819941 + L1Md_F2 LINE L1 4735 5584 -299 4 1819 7340 81 3 10 chrX 161830356 161831354 -4818942 + L1Md_F2 LINE L1 5587 6577 -5 4 1819 436 390 48 0 chrX 161832040 161832335 -4817961 - L2 LINE L2 -548 2871 2563 4 1819 224 301 32 158 chrX 161832342 161832500 -4817796 + B4 SINE B4 1 138 -154 4 1819 234 208 0 86 chrX 161832446 161832504 -4817792 + PB1D7 SINE Alu 5 57 -63 4 1819 250 256 28 9 chrX 161832470 161832542 -4817754 + PB1D10 SINE Alu 24 97 -51 4 1819 506 277 123 53 chrX 161832557 161832954 -4817342 + L1MA9 LINE L1 5852 6276 -36 4 1819 1123 188 35 4 chrX 161835590 161835820 -4814476 + Lx3B LINE L1 6733 6969 -4 4 1819 378 209 18 45 chrX 161836548 161836658 -4813638 + Lx8 LINE L1 6917 7023 -450 4 1819 181 375 67 9 chrX 161838037 161838142 -4812154 - L4 LINE RTE -829 1200 1090 4 1819 199 0 65 0 chrX 161839199 161839230 -4811066 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 4 1819 251 271 280 24 chrX 161839269 161839394 -4810902 + MER5A DNA MER1_type 1 157 -32 4 1819 704 313 154 0 chrX 161839391 161839637 -4810659 + B4A SINE B4 6 289 -3 4 1819 183 42 0 0 chrX 161839654 161839678 -4810618 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 1819 279 262 37 24 chrX 161840277 161840359 -4809937 + MTE2a LTR MaLR 282 364 -15 4 1819 277 236 18 0 chrX 161840793 161840848 -4809448 + MLT1H LTR MaLR 302 357 -192 5 1819 15649 160 33 64 chrX 161840864 161841860 -4808436 - L1_Mur1 LINE L1 -1342 4544 3494 5 1819 228 35 0 0 chrX 161841860 161841889 -4808407 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 5 1819 15649 160 33 64 chrX 161841889 161843133 -4807163 - L1_Mur1 LINE L1 -2393 3493 2215 5 1819 218 32 32 0 chrX 161843133 161843164 -4807132 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 1819 15649 166 41 49 chrX 161843164 161844019 -4806277 - L1_Mur1 LINE L1 -3672 2214 1389 5 1819 856 71 0 0 chrX 161844019 161844132 -4806164 - B1_Mus1 SINE Alu -1 147 35 5 1819 15649 166 41 49 chrX 161844132 161844736 -4805560 - L1_Mur1 LINE L1 -3672 1388 804 5 1819 29 0 0 0 chrX 161845994 161846023 -4804273 + AT_rich Low_complexity Low_complexity 1 29 0 5 1819 5067 53 0 0 chrX 161846025 161846648 -4803648 - L1Md_F3 LINE L1 -15 6569 5947 5 1819 7964 60 1 12 chrX 161846653 161848393 -4801903 - L1Md_F2 LINE L1 -12 6570 4851 5 1819 37443 20 5 7 chrX 161848380 161853975 -4796321 + L1Md_A LINE L1 7 5586 -297 5 1819 8601 22 1 0 chrX 161853975 161854970 -4795326 + L1Md_A LINE L1 5587 6582 0 5 1819 27131 80 4 12 chrX 161854991 161859466 -4790830 - L1Md_F2 LINE L1 -1007 4876 440 5 1819 16958 112 19 131 chrX 161859509 161861907 -4788389 - L1_Mus2 LINE L1 0 6566 4158 5 1819 3306 178 96 42 chrX 161861907 161862447 -4787849 - RLTR13D6 LTR ERVK 0 929 295 5 1819 3990 47 2 0 chrX 161862447 161862932 -4787364 - L1Md_F2 LINE L1 -12 6570 6085 5 1819 3306 175 99 43 chrX 161862932 161863182 -4787114 - RLTR13D6 LTR ERVK -608 294 61 5 1819 16958 131 20 192 chrX 161863182 161865055 -4785241 - L1_Mus2 LINE L1 -1726 4157 2249 5 1819 8013 46 2 1 chrX 161865066 161866243 -4784053 - L1Md_F2 LINE L1 -14 6568 5391 5 1819 544 205 184 7 chrX 161866240 161866392 -4783904 - L1_Mus2 LINE L1 -5833 783 605 5 1819 23 0 0 0 chrX 161866445 161866468 -4783828 + AT_rich Low_complexity Low_complexity 1 23 0 5 1819 288 0 0 0 chrX 161866754 161866786 -4783510 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1819 315 0 0 0 chrX 161866864 161866899 -4783397 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1819 422 270 45 112 chrX 161866902 161867187 -4783109 + ORR1E LTR MaLR 81 379 0 5 1819 21 0 0 0 chrX 161867338 161867359 -4782937 + AT_rich Low_complexity Low_complexity 1 21 0 5 1819 1185 171 36 9 chrX 161867685 161867904 -4782392 - URR1A DNA MER1_type -1 225 1 5 1819 30 0 0 0 chrX 161868537 161868567 -4781729 + AT_rich Low_complexity Low_complexity 1 30 0 5 1819 2327 59 19 13 chrX 161870215 161870523 -4779773 - L1_Mm LINE L1 -297 5586 5277 5 1819 1096 53 0 44 chrX 161870523 161870681 -4779615 + L1_Mus1 LINE L1 6417 6567 0 5 1819 209 189 0 0 chrX 161870692 161870729 -4779567 + A-rich Low_complexity Low_complexity 4 40 0 5 1819 295 312 37 12 chrX 161870746 161870827 -4779469 + B1F1 SINE Alu 13 95 -54 5 1819 510 143 19 9 chrX 161870845 161870951 -4779345 + GA-rich Low_complexity Low_complexity 4 110 0 5 1819 944 173 108 28 chrX 161871494 161871708 -4778588 - RMER1C Other Other 0 1342 1112 5 1819 465 19 0 0 chrX 161872591 161872645 -4777651 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 1819 24 32 0 0 chrX 161872916 161872947 -4777349 + AT_rich Low_complexity Low_complexity 1 31 0 5 1819 1455 73 14 5 chrX 161873381 161873588 -4776708 - L1Md_F2 LINE L1 0 6582 6374 5 1819 986 70 0 0 chrX 161873588 161873717 -4776579 + L1Md_F2 LINE L1 5919 6047 -535 5 1820 1113 69 0 14 chrX 161875347 161875494 -4774802 + B1_Mm SINE Alu 2 146 -1 5 1820 1236 51 0 28 chrX 161875517 161875697 -4774599 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 5 1820 503 293 87 8 chrX 161875990 161876231 -4774065 + L1M2 LINE L1 4809 5068 -1075 5 1820 769 342 50 8 chrX 161876333 161876575 -4773721 - B4 SINE B4 -4 288 37 5 1820 892 293 153 30 chrX 161876575 161876948 -4773348 - MTD LTR MaLR 0 419 1 5 1820 953 207 49 10 chrX 161876996 161877364 -4772932 + L1M2 LINE L1 5086 5472 -831 5 1820 1199 283 172 32 chrX 161877767 161878419 -4771877 - L1MD1 LINE L1 -121 6238 5496 5 1820 252 59 0 0 chrX 161878431 161878465 -4771831 + (T)n Simple_repeat Simple_repeat 1 34 0 5 1820 396 0 0 0 chrX 161878556 161878600 -4771696 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1820 275 308 19 117 chrX 161878600 161878762 -4771534 - MER20 DNA MER1_type -73 146 1 5 1820 200 392 31 46 chrX 161879328 161879523 -4770773 + L2c LINE L2 3108 3299 -88 5 1820 468 174 130 0 chrX 161879787 161879902 -4770394 - Lx9 LINE L1 -2 7642 7513 5 1820 414 192 13 0 chrX 161879913 161879991 -4770305 + MTC LTR MaLR 20 98 -298 5 1820 15353 104 18 9 chrX 161879992 161883070 -4767226 + L1Md_F LINE L1 362 3469 -2414 5 1820 1405 120 0 5 chrX 161883070 161883280 -4767016 + RLTR27 LTR ERVK 1 209 -100 5 1820 204 158 0 0 chrX 161883509 161883547 -4766749 + A-rich Low_complexity Low_complexity 1 38 0 5 1820 3205 298 41 43 chrX 161883552 161885459 -4764837 + MMERVK10C-int LTR ERVK 3579 5465 -2116 5 1820 354 312 18 24 chrX 161885673 161885837 -4764459 + MMERVK10C-int LTR ERVK 6907 7069 -512 5 1820 1404 185 0 23 chrX 161885971 161886236 -4764060 + MMERVK10C-int LTR ERVK 7321 7579 -2 5 1820 2011 120 13 10 chrX 161886238 161886542 -4763754 + RLTR27 LTR ERVK 1 305 -4 5 1820 6619 75 20 0 chrX 161886579 161887476 -4762820 + L1_Mm LINE L1 3458 4372 -1511 5 1820 5526 100 11 5 chrX 161887479 161888283 -4762013 + L1Md_F2 LINE L1 5762 6570 -12 5 1820 1554 216 39 10 chrX 161888292 161888601 -4761695 + MTC LTR MaLR 104 421 0 5 1820 287 214 112 0 chrX 161888601 161888690 -4761606 - Lx9 LINE L1 -147 7497 7399 5 1820 732 224 12 0 chrX 161888687 161888857 -4761439 + Lx9 LINE L1 7054 7225 -419 5 1820 454 309 39 26 chrX 161888890 161889043 -4761253 - MER5A DNA MER1_type -31 158 4 5 1820 581 309 110 19 chrX 161889536 161889800 -4760496 + B4A SINE B4 1 288 -4 5 1820 261 0 0 0 chrX 161889809 161889838 -4760458 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1820 455 292 47 54 chrX 161889967 161890220 -4760076 + MLT1E1A LTR MaLR 250 680 0 5 1820 510 17 0 0 chrX 161890269 161890328 -4759968 + (TG)n Simple_repeat Simple_repeat 1 59 0 5 1820 207 139 0 0 chrX 161891286 161891322 -4758974 + (GGGAGA)n Simple_repeat Simple_repeat 6 41 0 5 1820 463 338 54 65 chrX 161891370 161891721 -4758575 + L1ME4a LINE L1 5572 5918 -206 5 1820 415 290 89 49 chrX 161891726 161891929 -4758367 - Lx8 LINE L1 -265 7208 6998 5 1820 587 309 81 81 chrX 161892604 161892889 -4757407 + B4A SINE B4 1 285 -7 5 1820 377 167 0 13 chrX 161892892 161892971 -4757325 + GA-rich Low_complexity Low_complexity 5 82 0 5 1820 248 211 20 31 chrX 161892987 161893085 -4757211 + (TTTG)n Simple_repeat Simple_repeat 3 99 0 5 1820 691 320 79 29 chrX 161893624 161894183 -4756113 + L1M5 LINE L1 4509 5095 -1051 5 1820 216 97 0 0 chrX 161894914 161894945 -4755351 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 5 1820 288 0 0 0 chrX 161896517 161896549 -4753747 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1820 644 240 82 22 chrX 161897135 161897318 -4752978 + RLTR28B LTR ERVL 1 194 -287 5 1820 1297 93 0 6 chrX 161897319 161897492 -4752804 + B2_Mm2 SINE B2 1 172 -23 5 1820 1098 247 34 58 chrX 161897541 161897833 -4752463 + RLTR28B LTR ERVL 186 470 -11 5 1820 197 412 26 0 chrX 161898232 161898346 -4751950 - MIR3 SINE MIR -78 130 14 5 1820 2198 251 70 9 chrX 161899208 161899798 -4750498 + Lx7 LINE L1 6679 7303 -393 5 1820 423 0 0 0 chrX 161899798 161899845 -4750451 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1820 2198 251 70 9 chrX 161899845 161899896 -4750400 + Lx7 LINE L1 7304 7359 -337 5 1820 303 222 108 69 chrX 161899918 161900121 -4750175 - Lx2B LINE L1 -2 6998 6788 5 1820 270 0 0 0 chrX 161900393 161900423 -4749873 + (CAAA)n Simple_repeat Simple_repeat 4 33 0 5 1820 658 285 28 16 chrX 161900757 161900939 -4749357 + MLT1H2 LTR MaLR 5 188 -301 5 1820 181 333 0 14 chrX 161901103 161901173 -4749123 - MER5B DNA MER1_type -75 103 35 5 1820 721 220 0 19 chrX 161901316 161901478 -4748818 - Lx LINE L1 0 7050 6892 5 1820 341 213 10 50 chrX 161901492 161901591 -4748705 + Lx9 LINE L1 7192 7286 -358 5 1820 297 109 18 18 chrX 161901639 161901695 -4748601 + RMER4B LTR ERVK 530 585 0 5 1820 2290 103 29 6 chrX 161901735 161902086 -4748210 - Lx LINE L1 -17 6637 6279 5 1820 992 199 0 9 chrX 161902141 161902172 -4748124 - Lx LINE L1 -2 6652 6622 5 1820 198 0 0 0 chrX 161902172 161902194 -4748102 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 5 1820 6390 148 17 10 chrX 161902194 161904174 -4746122 - Lx2 LINE L1 -31 6969 4867 5 1820 33779 35 1 0 chrX 161904175 161910016 -4740280 + L1Md_T LINE L1 1 5589 -297 5 1820 9019 6 0 0 chrX 161910016 161911012 -4739284 + L1Md_T LINE L1 5590 6585 0 5 1820 2929 170 33 5 chrX 161911019 161911252 -4739044 - Lx2 LINE L1 -1007 4870 4638 5 1820 198 71 0 0 chrX 161911252 161911280 -4739016 + (TTG)n Simple_repeat Simple_repeat 2 29 0 5 1820 2929 170 33 5 chrX 161911280 161911660 -4738636 - Lx2 LINE L1 -1240 4637 4242 5 1820 1993 181 15 0 chrX 161911647 161912051 -4738245 - Lx2 LINE L1 -2124 3753 3344 5 1820 36216 43 1 3 chrX 161912056 161918320 -4731976 - L1Md_T LINE L1 0 6585 242 5 1820 12759 104 28 8 chrX 161918320 161920987 -4729309 - L1VL4 LINE L1 -552 3007 284 5 1820 921 196 165 24 chrX 161920987 161921355 -4728941 - RMER20B LTR ERVK -207 420 1 5 1820 665 280 11 22 chrX 161921785 161922055 -4728241 + L1MA6 LINE L1 6028 6294 -6 5 1820 222 328 32 16 chrX 161922296 161922358 -4727938 + ID4_ SINE ID 17 79 -4 5 1820 261 271 0 23 chrX 161922435 161922522 -4727774 + Lx8 LINE L1 7388 7472 -1 5 1820 2987 160 43 7 chrX 161922531 161923141 -4727155 - L1_Mur2 LINE L1 -3380 2497 1866 5 1820 2529 214 11 9 chrX 161923532 161924089 -4726207 + Lx4B LINE L1 6501 7058 0 5 1820 443 65 0 0 chrX 161926096 161926158 -4724138 - L1Md_F2 LINE L1 -13 6569 6508 5 1820 2909 239 25 40 chrX 161926158 161926965 -4723331 + Lx9 LINE L1 6514 7308 -336 5 1820 639 291 46 0 chrX 161927154 161927329 -4722967 + B3A SINE B2 1 183 -15 5 1820 240 311 22 118 chrX 161927422 161927557 -4722739 + MER77 LTR ERVL 474 595 -12 5 1820 23 33 0 0 chrX 161927611 161927641 -4722655 + AT_rich Low_complexity Low_complexity 1 30 0 5 1820 771 297 77 29 chrX 161928698 161929150 -4721146 + Lx8 LINE L1 6969 7453 -20 5 1820 26 0 0 0 chrX 161929564 161929590 -4720706 + AT_rich Low_complexity Low_complexity 1 26 0 5 1820 2122 161 2 48 chrX 161929619 161930036 -4720260 - RMER10B LTR ERVL 0 398 1 5 1820 540 0 0 0 chrX 161930077 161930137 -4720159 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1820 584 354 15 10 chrX 161930896 161931096 -4719200 + B4A SINE B4 41 241 -51 5 1820 743 177 0 34 chrX 161931125 161931271 -4719025 + MTC LTR MaLR 281 421 0 5 1820 454 283 53 11 chrX 161931378 161931567 -4718729 - RMER30 DNA MER1_type -1 201 5 6 1820 411 253 22 0 chrX 161931661 161931752 -4718544 + MER58B DNA MER1_type 234 326 -15 6 1820 500 303 110 39 chrX 161931826 161932080 -4718216 + B4A SINE B4 3 274 -18 6 1820 321 82 0 0 chrX 161932113 161932162 -4718134 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1820 1415 174 31 79 chrX 161932319 161932692 -4717604 + RLTR20C LTR ERVK 3 444 -90 6 1820 279 0 0 0 chrX 161932692 161932723 -4717573 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1820 1415 214 58 32 chrX 161932723 161932814 -4717482 + RLTR20C LTR ERVK 445 534 0 6 1820 676 269 44 146 chrX 161933153 161933597 -4716699 + MTE2a LTR MaLR 5 379 0 6 1820 203 125 0 24 chrX 161935407 161935448 -4714848 + (TTTC)n Simple_repeat Simple_repeat 3 42 0 6 1820 4095 226 70 28 chrX 161935505 161935622 -4714674 - RMER1A Other Other -4 1026 911 6 1820 264 77 0 0 chrX 161935622 161935661 -4714635 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1820 477 0 0 0 chrX 161935661 161935713 -4714583 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 1820 4095 238 62 28 chrX 161935713 161936702 -4713594 - RMER1A Other Other -120 910 11 6 1820 3640 156 6 16 chrX 161938029 161938327 -4711969 + L1_Mur2 LINE L1 5204 5503 -374 6 1820 5406 106 78 14 chrX 161938327 161939179 -4711117 + RMER17A2 LTR ERVK 1 906 0 6 1820 3640 156 6 16 chrX 161939179 161939556 -4710740 + L1_Mur2 LINE L1 5504 5872 -5 6 1820 4903 180 37 8 chrX 161939570 161940471 -4709825 + Lx5 LINE L1 6117 7043 -7 6 1820 1001 305 152 48 chrX 161940473 161941152 -4709144 + MTE-int LTR MaLR 149 1186 -394 6 1820 1846 219 54 5 chrX 161941224 161941650 -4708646 - Lx9 LINE L1 -718 6926 6480 6 1820 3117 213 82 76 chrX 161941659 161942925 -4707371 - Lx9 LINE L1 -1529 6115 4789 6 1820 4631 171 12 7 chrX 161943573 161944390 -4705906 - Lx LINE L1 -7 6647 5827 6 1820 7188 114 4 4 chrX 161944390 161945878 -4704418 - L1_Mus3 LINE L1 -6 6632 5145 6 1820 4004 164 11 1 chrX 161945907 161946601 -4703695 - L1_Mm LINE L1 -42 5841 5141 6 1820 1152 106 37 0 chrX 161946600 161946789 -4703507 - MusHAL1 LINE L1 -1678 1034 839 6 1820 7451 68 4 2 chrX 161946768 161947717 -4702579 - L1_Mus1 LINE L1 0 6567 5617 6 1820 1125 77 5 62 chrX 161947703 161947911 -4702385 - MusHAL1 LINE L1 -1822 890 695 6 1820 542 294 168 3 chrX 161947986 161948307 -4701989 - L1MC3 LINE L1 -279 7506 7133 6 1820 351 229 0 88 chrX 161948314 161948405 -4701891 + B3A SINE B2 2 84 -114 6 1820 575 252 97 7 chrX 161948412 161948556 -4701740 + B3A SINE B2 16 172 -26 6 1820 450 0 0 0 chrX 161948559 161948609 -4701687 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1820 471 246 41 34 chrX 161948616 161948763 -4701533 - ORR1D2 LTR MaLR -13 357 210 6 1820 913 289 113 26 chrX 161948785 161949351 -4700945 - MTC-int LTR MaLR -324 1256 256 6 1820 511 131 5 9 chrX 161949367 161949468 -4700828 + RLTR12B LTR ERVK 13 111 -457 6 1820 5177 109 13 18 chrX 161949468 161950666 -4699630 - L1VL4 LINE L1 -2208 1351 162 6 1820 24 0 0 0 chrX 161950741 161950765 -4699531 + AT_rich Low_complexity Low_complexity 1 24 0 6 1820 650 320 105 4 chrX 161951425 161951673 -4698623 - Lx9 LINE L1 -986 6658 6386 6 1820 22 56 0 0 chrX 161951739 161951775 -4698521 + AT_rich Low_complexity Low_complexity 1 36 0 6 1820 375 136 0 0 chrX 161951859 161951918 -4698378 - Lx9 LINE L1 -182 7462 7404 6 1820 650 185 0 0 chrX 161952090 161952198 -4698098 - Lx9 LINE L1 -1007 6637 6530 6 1820 1512 240 61 22 chrX 161952273 161952878 -4697418 - Lx9 LINE L1 -1551 6093 5445 6 1820 2037 245 81 50 chrX 161952961 161953579 -4696717 + Lx9 LINE L1 6666 7302 -342 6 1820 1475 155 97 28 chrX 161953691 161953936 -4696360 + Lx9 LINE L1 7302 7565 -79 6 1820 2379 98 6 6 chrX 161953936 161954263 -4696033 + ORR1A2 LTR MaLR 1 327 0 6 1820 1475 155 97 28 chrX 161954263 161954336 -4695960 + Lx9 LINE L1 7566 7642 -2 6 1820 306 307 57 45 chrX 161954605 161954900 -4695396 + L1MA4A LINE L1 5724 6011 -286 6 1820 243 88 0 0 chrX 161955095 161955129 -4695167 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 6 1820 214 345 47 12 chrX 161956480 161956565 -4693731 + L2c LINE L2 3300 3387 0 6 1820 276 280 13 0 chrX 161958560 161958635 -4691661 + MER5A1 DNA MER1_type 1 76 -90 6 1820 527 250 116 8 chrX 161958639 161958768 -4691528 + B1F1 SINE Alu 6 148 -1 6 1820 795 116 0 0 chrX 161958910 161959031 -4691265 + (GA)n Simple_repeat Simple_repeat 2 122 0 6 1820 375 259 49 5 chrX 161959594 161959760 -4690536 - L1MA4 LINE L1 -294 6006 5755 6 1820 312 359 53 38 chrX 161960471 161960604 -4689692 - MIRb SINE MIR -20 248 114 6 1820 564 296 142 16 chrX 161960655 161960909 -4689387 - MT2A LTR ERVL -2 531 246 6 1820 235 286 74 82 chrX 161961018 161961140 -4689156 - MT2A LTR ERVL -319 214 94 6 1820 2129 45 0 11 chrX 161961888 161962155 -4688141 + L1Md_F2 LINE L1 6307 6570 -12 6 1820 412 210 20 0 chrX 161962285 161962385 -4687911 - Lx9 LINE L1 -24 7620 7519 6 1820 531 31 0 0 chrX 161962388 161962453 -4687843 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 1820 292 220 0 0 chrX 161962453 161962512 -4687784 - Lx9 LINE L1 -184 7460 7402 6 1820 579 194 16 31 chrX 161962528 161962656 -4687640 + Lx9 LINE L1 7268 7393 -251 6 1820 21 0 0 0 chrX 161964087 161964108 -4686188 + AT_rich Low_complexity Low_complexity 1 21 0 6 1820 647 297 31 0 chrX 161964710 161964902 -4685394 + B3A SINE B2 1 198 0 6 1820 219 69 0 0 chrX 161965864 161965893 -4684403 + (T)n Simple_repeat Simple_repeat 1 29 0 6 1820 1158 68 0 0 chrX 161965893 161966040 -4684256 - B1_Mm SINE Alu 0 147 1 6 1820 1058 231 59 176 chrX 161966406 161966832 -4683464 + ORR1C2 LTR MaLR 4 379 -5 6 1820 353 278 45 12 chrX 161967325 161967484 -4682812 + Lx8 LINE L1 5816 5981 -1663 6 1820 344 325 116 11 chrX 161967709 161967808 -4682488 + Lx8 LINE L1 6071 6180 -1516 6 1820 450 0 0 0 chrX 161967808 161967858 -4682438 + (TA)n Simple_repeat Simple_repeat 1 50 0 6 1820 499 315 36 12 chrX 161967858 161968026 -4682270 + Lx8 LINE L1 6181 6366 -1107 6 1820 681 191 29 0 chrX 161968081 161968217 -4682079 + URR1B DNA MER1_type 83 222 -3 6 1820 2276 328 80 13 chrX 161968239 161969139 -4681157 + Lx8 LINE L1 6379 7338 -135 6 1820 477 0 0 0 chrX 161969139 161969192 -4681104 + (TTTA)n Simple_repeat Simple_repeat 4 56 0 6 1820 2276 328 80 13 chrX 161969192 161969317 -4680979 + Lx8 LINE L1 7339 7473 0 6 1820 1701 188 113 5 chrX 161969440 161969820 -4680476 - MTC LTR MaLR 0 421 1 6 1820 308 174 61 44 chrX 161970414 161970538 -4679758 + Lx3B LINE L1 6873 7007 -2 6 1820 23 86 0 0 chrX 161970538 161970596 -4679700 + AT_rich Low_complexity Low_complexity 1 58 0 6 1820 452 270 68 19 chrX 161970957 161971019 -4679277 + B4A SINE B4 25 92 -200 6 1820 267 269 73 46 chrX 161971019 161971128 -4679168 + PB1D9 SINE Alu 3 114 -6 6 1820 466 214 37 37 chrX 161971146 161971253 -4679043 + RSINE1 SINE B4 38 144 -21 6 1820 183 100 0 0 chrX 161971263 161971293 -4679003 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1820 369 109 0 0 chrX 161971315 161971370 -4678926 + (TAAA)n Simple_repeat Simple_repeat 4 58 0 6 1820 521 221 49 28 chrX 161971375 161971519 -4678777 + B1_Mur2 SINE Alu 3 149 0 6 1820 336 24 0 0 chrX 161971589 161971630 -4678666 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1820 231 173 0 0 chrX 161972379 161972431 -4677865 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 1820 671 299 125 12 chrX 161972503 161972920 -4677376 + L1MA5 LINE L1 5834 6297 -3 6 1820 234 339 88 18 chrX 161973277 161973391 -4676905 + MIRb SINE MIR 124 245 -23 6 1820 27 0 0 0 chrX 161974078 161974105 -4676191 + AT_rich Low_complexity Low_complexity 1 27 0 6 1820 569 192 0 31 chrX 161974717 161974846 -4675450 + Lx5 LINE L1 6926 7050 0 6 1820 324 0 0 0 chrX 161975574 161975610 -4674686 + (A)n Simple_repeat Simple_repeat 1 36 0 6 1820 1538 197 82 13 chrX 161976401 161976704 -4673592 - ORR1C2 LTR MaLR -60 324 1 6 1820 537 30 0 0 chrX 161976718 161976785 -4673511 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1820 1805 180 63 27 chrX 161977125 161977490 -4672806 - RLTR14 LTR ERV1 0 382 5 6 1820 332 302 50 16 chrX 161977891 161978012 -4672284 + L1MEe LINE L1 782 906 -3948 6 1820 22 35 0 0 chrX 161978363 161978392 -4671904 + AT_rich Low_complexity Low_complexity 1 29 0 6 1820 1784 164 157 3 chrX 161978668 161979019 -4671277 + MTC LTR MaLR 1 385 -9 6 1820 2256 188 22 19 chrX 161979022 161979434 -4670862 + MTC LTR MaLR 1 413 -8 6 1820 1067 298 42 64 chrX 161979820 161980167 -4670129 - L1MB7 LINE L1 -65 6119 5784 6 1820 693 120 98 0 chrX 161980167 161980300 -4669996 - Lx3C LINE L1 -2 6974 6829 6 1820 1067 298 42 64 chrX 161980300 161980543 -4669753 - L1MB7 LINE L1 -401 5783 5542 6 1820 275 364 0 11 chrX 161981045 161981134 -4669162 - RSINE1 SINE B4 -20 145 58 6 1820 7644 67 2 7 chrX 161981197 161982323 -4667973 - L1_Mus1 LINE L1 -2 6565 5446 6 1820 588 189 69 74 chrX 161982328 161982517 -4667779 - Lx9 LINE L1 -24 7620 7433 6 1820 433 258 35 173 chrX 161982528 161982599 -4667697 - Lx9 LINE L1 -1142 6502 6440 6 1820 2029 82 0 0 chrX 161982599 161982869 -4667427 + L1_Mus1 LINE L1 6298 6567 0 6 1820 433 258 35 173 chrX 161982869 161982994 -4667302 - Lx9 LINE L1 -1205 6439 6333 6 1820 564 330 88 34 chrX 161983042 161983634 -4666662 - L1M2 LINE L1 -3390 2753 2130 6 1820 436 68 14 14 chrX 161983816 161983890 -4666406 + (TA)n Simple_repeat Simple_repeat 2 75 0 6 1820 25 31 0 0 chrX 161983919 161983951 -4666345 + AT_rich Low_complexity Low_complexity 1 32 0 6 1820 251 277 33 74 chrX 161985185 161985306 -4664990 + L1MD3 LINE L1 7852 7967 -28 6 1820 496 260 58 39 chrX 161986578 161986700 -4663596 + RSINE1 SINE B4 7 128 -37 6 1820 486 0 0 0 chrX 161986700 161986754 -4663542 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 1820 496 260 58 39 chrX 161986754 161986787 -4663509 + RSINE1 SINE B4 129 165 0 6 1820 354 366 124 60 chrX 161987059 161987698 -4662598 - L2 LINE L2 -357 3062 2383 6 1820 430 296 101 27 chrX 161989534 161989916 -4660380 + L1MD2 LINE L1 5797 6215 -27 6 1820 10887 101 27 89 chrX 161989915 161992263 -4658033 - Lx3B LINE L1 -820 6153 3989 6 1820 4888 137 27 33 chrX 161992263 161992541 -4657755 + Lx3B LINE L1 6127 6381 -592 6 1820 2409 114 0 55 chrX 161992541 161992921 -4657375 - RLTR10D LTR ERVK 0 359 1 6 1820 4888 137 27 33 chrX 161992921 161993494 -4656802 + Lx3B LINE L1 6382 6973 0 6 1820 435 38 0 0 chrX 161993507 161993560 -4656736 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 6 1820 239 219 31 0 chrX 161993573 161993637 -4656659 + L1ME1 LINE L1 6046 6111 -68 6 1820 1900 206 14 8 chrX 161993637 161994004 -4656292 - ORR1D1 LTR MaLR 0 374 6 6 1820 657 284 49 43 chrX 161994022 161994394 -4655902 - MT2B2 LTR ERVL -56 528 1 6 1820 2588 275 88 94 chrX 161994394 161995720 -4654576 - ORR1D1-int LTR MaLR -192 1317 1 6 1820 1512 207 102 6 chrX 161995727 161996062 -4654234 - ORR1D1 LTR MaLR -7 367 1 6 1820 206 32 32 0 chrX 161996539 161996570 -4653726 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 6 1820 762 176 0 0 chrX 161996576 161996701 -4653595 - B1_Mus1 SINE Alu -21 127 3 7 1820 543 348 59 71 chrX 161996883 161997223 -4653073 - MLT1A0 LTR MaLR 0 365 30 7 1820 10727 61 0 0 chrX 161997223 161999270 -4651026 - L1Md_F2 LINE L1 -12 6570 4523 7 1820 183 319 58 0 chrX 161999344 161999413 -4650883 - MIR SINE MIR -102 160 88 7 1820 748 315 175 16 chrX 162000155 162000458 -4649838 + ORR1E LTR MaLR 9 359 0 1 1820 330 26 0 0 chrX 162000463 162000502 -4649794 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 1820 366 60 0 0 chrX 162000659 162000763 -4649533 - L1_Mus1 LINE L1 0 6567 6512 3 1820 491 300 8 8 chrX 162001702 162001833 -4648463 + RSINE1 SINE B4 11 141 -24 4 1820 500 0 0 16 chrX 162001834 162001895 -4648401 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1820 4061 169 6 42 chrX 162001946 162002098 -4648198 + L1VL4 LINE L1 552 693 -5964 6 1820 5518 119 75 6 chrX 162002098 162002991 -4647305 - RMER17B LTR ERVK 0 958 4 7 227 15658 169 34 23 chrX 162002991 162005247 -4645049 + L1VL4 LINE L1 694 2998 -2888 6 1821 306 0 0 0 chrX 162005247 162005281 -4645015 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 1821 15658 169 45 15 chrX 162005281 162006746 -4643550 + L1VL4 LINE L1 2999 4492 -1394 6 1821 434 161 0 0 chrX 162006747 162006834 -4643462 + Lx LINE L1 6562 6648 -6 9 1821 1053 93 0 0 chrX 162006866 162007006 -4643290 + B1_Mus2 SINE Alu 2 141 -6 1 1821 201 74 0 0 chrX 162007008 162007035 -4643261 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1821 227 294 97 11 chrX 162007096 162007189 -4643107 + MLT1A1 LTR MaLR 3 103 -305 1 1821 407 191 20 41 chrX 162007372 162007470 -4642826 + MLT1A1 LTR MaLR 313 408 0 1 1821 243 0 0 0 chrX 162007573 162007600 -4642696 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1821 584 294 83 38 chrX 162007689 162008132 -4642164 - Charlie21a DNA MER1_type -36 1177 715 1 1821 272 282 138 42 chrX 162008173 162008462 -4641834 - Charlie21a DNA MER1_type -590 623 307 1 1821 620 309 0 0 chrX 162008571 162008710 -4641586 + RSINE1 SINE B4 6 144 -21 1 1821 29 47 0 0 chrX 162008755 162008798 -4641498 + AT_rich Low_complexity Low_complexity 1 43 0 1 1821 262 304 38 29 chrX 162008926 162009031 -4641265 - MLT1I LTR MaLR -14 397 292 1 1821 417 255 28 0 chrX 162009650 162009756 -4640540 + L1ME3A LINE L1 5903 6011 -162 1 1821 414 0 0 0 chrX 162009774 162009820 -4640476 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1821 262 196 34 216 chrX 162010545 162010753 -4639543 - Lx9 LINE L1 -15 7629 7460 2 1821 276 181 24 12 chrX 162010756 162010840 -4639456 + (TA)n Simple_repeat Simple_repeat 2 86 0 2 1821 3039 287 85 16 chrX 162010845 162011966 -4638330 - Lx9 LINE L1 -128 7516 6319 2 1821 2706 210 54 36 chrX 162012029 162012813 -4637483 + Lx9 LINE L1 5141 5973 -1671 2 1821 1085 274 75 30 chrX 162013036 162013398 -4636898 - Lx8 LINE L1 -2 7471 7094 2 1821 1178 230 8 19 chrX 162013395 162013652 -4636644 - Lx8 LINE L1 -647 6826 6573 2 1821 299 302 70 75 chrX 162013665 162013851 -4636445 - L1MC4 LINE L1 -568 7474 7290 2 1821 244 174 0 21 chrX 162013954 162014001 -4636295 - L1MC4 LINE L1 -1089 6793 6748 2 1821 190 169 33 17 chrX 162014308 162014368 -4635928 + GA-rich Low_complexity Low_complexity 4 64 0 2 1821 326 323 114 24 chrX 162014390 162014644 -4635652 - L1MEf LINE L1 -4757 1443 1167 2 1821 2499 89 57 3 chrX 162015281 162015651 -4634645 - Lx3_Mus LINE L1 0 7009 6620 2 1821 2552 103 65 16 chrX 162015651 162016035 -4634261 + Lx3_Mus LINE L1 6237 6639 -370 2 1821 202 280 0 0 chrX 162016301 162016351 -4633945 + GA-rich Low_complexity Low_complexity 2 51 0 3 1821 859 212 105 8 chrX 162016568 162016834 -4633462 + Lx9 LINE L1 7351 7642 -2 3 1821 1207 97 16 11 chrX 162017272 162017459 -4632837 - L1Md_F2 LINE L1 -12 6570 6383 3 1821 21650 87 21 3 chrX 162017459 162019881 -4630415 - L1Md_F LINE L1 -1472 4411 1978 3 1821 195 69 0 0 chrX 162019881 162019910 -4630386 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 1821 21650 97 18 12 chrX 162019910 162020751 -4629545 - L1Md_F LINE L1 -3906 1977 1111 3 1821 231 36 0 0 chrX 162020751 162020779 -4629517 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 3 1821 7065 68 16 1 chrX 162020781 162022116 -4628180 - L1Md_F2 LINE L1 -19 6563 5200 3 1821 5366 156 59 1 chrX 162022113 162023030 -4627266 - L1Md_F LINE L1 -5499 1117 148 3 1821 304 304 25 0 chrX 162023095 162023174 -4627122 - ID_B1 SINE B4 -1 223 143 3 1821 1580 253 37 20 chrX 162024329 162024732 -4625564 + L1VL2 LINE L1 108 517 -5818 3 1821 518 142 51 34 chrX 162024727 162024844 -4625452 + L1_Mm LINE L1 2000 2118 -3765 3 1821 3646 39 5 0 chrX 162024845 162025285 -4625011 - L1Md_F2 LINE L1 -3 6579 6138 4 1821 1654 99 4 11 chrX 162025293 162025559 -4624737 + MusHAL1 LINE L1 1693 1956 -756 4 1821 1337 101 5 0 chrX 162025567 162025765 -4624531 - L1_Mm LINE L1 -396 5487 5289 4 1821 341 128 0 79 chrX 162025766 162025842 -4624454 + L1_Mus3 LINE L1 6553 6622 -16 4 1821 14783 47 1 3 chrX 162025842 162027691 -4622605 + L1Md_F3 LINE L1 3740 5585 -298 4 1821 8015 42 4 1 chrX 162027692 162028670 -4621626 + L1Md_F3 LINE L1 5587 6567 -17 4 1821 569 14 14 0 chrX 162028780 162028850 -4621446 + (TC)n Simple_repeat Simple_repeat 1 71 0 4 1821 449 249 42 18 chrX 162029003 162029197 -4621099 - L1MA4 LINE L1 -373 5927 5691 4 1821 2315 150 32 0 chrX 162029197 162029571 -4620725 + ORR1B1 LTR MaLR 1 386 -8 4 1821 693 293 59 41 chrX 162029578 162029898 -4620398 - L1MA4 LINE L1 -166 5681 5356 4 1821 24687 169 33 4 chrX 162029920 162032806 -4617490 - Lx3C LINE L1 -2 6974 3996 4 1821 2932 52 2 72 chrX 162032806 162033223 -4617073 - RLTR10 LTR ERVK -2 388 1 4 1821 24687 174 23 13 chrX 162033223 162036495 -4613801 - Lx3C LINE L1 -1891 3995 709 4 1821 234 191 85 53 chrX 162036870 162036927 -4613369 - L1_Mur3 LINE L1 -577 5303 5247 5 1821 216 0 0 0 chrX 162036927 162036951 -4613345 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 5 1821 234 191 85 53 chrX 162036951 162036987 -4613309 - L1_Mur3 LINE L1 -634 5246 5208 5 1821 852 327 47 10 chrX 162037019 162037513 -4612783 - L1_Mur3 LINE L1 -3892 1988 1477 5 1821 868 280 34 0 chrX 162037573 162037780 -4612516 + B3 SINE B2 2 215 -1 5 1821 245 293 0 0 chrX 162038401 162038459 -4611837 + Tigger5 DNA MER2_type 2339 2396 -10 5 1821 4476 137 33 82 chrX 162038504 162039453 -4610843 + RLTR13D6 LTR ERVK 1 902 0 5 1821 294 317 84 28 chrX 162039454 162039561 -4610735 + MLT1J1 LTR MaLR 72 184 -260 5 1821 937 308 108 19 chrX 162039644 162039877 -4610419 + ORR1E LTR MaLR 18 256 -103 5 1821 4490 150 29 99 chrX 162039877 162040852 -4609444 + RMER17A2 LTR ERVK 1 906 0 5 1821 937 308 108 19 chrX 162040852 162040932 -4609364 + ORR1E LTR MaLR 257 359 0 5 1821 1614 35 0 0 chrX 162041052 162041253 -4609043 - L1Md_F3 LINE L1 -15 6569 6369 5 1821 611 272 52 0 chrX 162041725 162041898 -4608398 + B3A SINE B2 1 182 -16 6 1821 644 123 9 0 chrX 162041952 162042066 -4608230 + (TA)n Simple_repeat Simple_repeat 2 116 0 6 1821 511 229 226 33 chrX 162042262 162042443 -4607853 - ID_B1 SINE B4 -8 216 1 6 1821 689 261 65 10 chrX 162043165 162043366 -4606930 - MT2B LTR ERVL 0 601 390 6 1821 364 185 78 0 chrX 162043411 162043495 -4606801 - MT2B LTR ERVL -404 89 1 6 1821 790 172 37 6 chrX 162043561 162043725 -4606571 - MERVL_2A-int LTR ERVL -103 5658 5490 6 1821 27450 127 10 3 chrX 162043737 162046162 -4604134 - L1_Mus3 LINE L1 -2 6636 4204 6 1821 2777 31 0 0 chrX 162046162 162046484 -4603812 - RLTRETN_Mm LTR ERVK 0 322 1 6 1821 27450 151 14 10 chrX 162046484 162050052 -4600244 - L1_Mus3 LINE L1 -1680 4203 611 6 1821 5417 181 45 14 chrX 162050056 162050931 -4599365 - MERVL_2A-int LTR ERVL -279 5482 4576 6 1821 2465 189 29 27 chrX 162050931 162051452 -4598844 - RLTR28 LTR ERVL 0 524 3 6 1821 5417 187 12 16 chrX 162051452 162051643 -4598653 - MERVL_2A-int LTR ERVL -1186 4575 4391 6 1821 402 147 14 29 chrX 162052599 162052669 -4597627 + ID_B1 SINE B4 154 222 -2 6 1821 19566 148 22 36 chrX 162055419 162060647 -4589649 + L1VL2 LINE L1 400 5525 -358 6 1821 2178 164 14 0 chrX 162061409 162061763 -4588533 + ORR1B2 LTR MaLR 1 359 -8 7 1821 391 294 88 7 chrX 162062423 162062570 -4587726 + MER5A1 DNA MER1_type 3 161 -5 7 1821 1309 211 165 22 chrX 162062886 162063249 -4587047 + MTD LTR MaLR 5 419 0 7 1821 283 181 14 14 chrX 162063726 162063799 -4586497 + GA-rich Low_complexity Low_complexity 5 77 0 7 1821 4851 97 22 7 chrX 162063943 162064661 -4585635 - L1_Mus3 LINE L1 0 6638 5910 7 1821 2296 75 3 0 chrX 162064664 162064982 -4585314 + L1_Mus3 LINE L1 5588 5906 -660 7 1821 2538 95 0 0 chrX 162065352 162065690 -4584606 + Lx3_Mus LINE L1 6672 7009 0 7 1821 432 0 0 0 chrX 162065691 162065739 -4584557 + (TA)n Simple_repeat Simple_repeat 1 48 0 7 1821 353 372 66 39 chrX 162066313 162066570 -4583726 - LTR89 LTR ERVL? -40 839 576 7 1821 744 306 129 7 chrX 162067509 162067812 -4582484 - MER58B DNA MER1_type -1 340 1 7 1821 2139 168 11 126 chrX 162068302 162068778 -4581518 - MTC LTR MaLR 0 421 1 7 1821 265 335 185 13 chrX 162069971 162070128 -4580168 - MIR SINE MIR -28 234 51 8 1821 5862 67 42 24 chrX 162070218 162071025 -4579271 + RLTR13B2 LTR ERVK 1 822 0 8 1821 204 40 0 0 chrX 162072180 162072205 -4578091 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 8 1821 33920 46 0 4 chrX 162072263 162077752 -4572544 + L1Md_T LINE L1 24 5589 -297 8 1821 8555 29 0 0 chrX 162077752 162078748 -4571548 + L1Md_T LINE L1 5590 6585 0 8 1821 22 35 0 0 chrX 162079363 162079392 -4570904 + AT_rich Low_complexity Low_complexity 1 29 0 8 1821 499 258 54 54 chrX 162079437 162079679 -4570617 - L1MC3 LINE L1 -103 7682 7441 8 1821 4340 120 58 6 chrX 162079904 162080609 -4569687 - RLTR33 LTR ERVK -11 667 18 8 1821 4701 48 0 9 chrX 162080672 162081254 -4569042 + L1Md_F2 LINE L1 6004 6580 -2 8 1821 477 288 100 52 chrX 162081359 162081569 -4568727 - L1MC3 LINE L1 -426 7359 7138 8 1821 180 0 0 0 chrX 162081569 162081589 -4568707 + (CA)n Simple_repeat Simple_repeat 1 20 0 8 1821 477 288 100 52 chrX 162081589 162081627 -4568669 - L1MC3 LINE L1 -648 7137 7100 8 1821 262 241 108 20 chrX 162081695 162081843 -4568453 - L1MC3 LINE L1 -794 6991 6831 8 1821 201 154 0 0 chrX 162081848 162081887 -4568409 + CT-rich Low_complexity Low_complexity 1 39 0 8 1821 4312 17 0 0 chrX 162081940 162082422 -4567874 - LTRIS_Mm LTR ERV1 0 482 1 9 1821 36777 32 15 14 chrX 162082422 162087106 -4563190 - MuRRS-int LTR ERV1 0 4690 1 9 1821 3998 12 0 116 chrX 162087106 162087651 -4562645 - LTRIS_Mm LTR ERV1 0 482 1 9 1821 249 108 0 0 chrX 162087693 162087730 -4562566 + (T)n Simple_repeat Simple_repeat 1 37 0 9 1821 844 310 50 28 chrX 162087758 162088180 -4562116 + Kanga11a DNA Tc2 263 693 -277 9 1821 354 143 0 0 chrX 162088410 162088473 -4561823 + (CA)n Simple_repeat Simple_repeat 2 64 0 9 1821 2567 306 35 59 chrX 162088661 162088905 -4561391 - Lx8 LINE L1 -244 7229 6998 9 1821 1898 67 33 7 chrX 162088905 162089176 -4561120 - L1_Mus3 LINE L1 0 6638 6361 9 1821 2567 306 35 59 chrX 162089176 162089997 -4560299 - Lx8 LINE L1 -476 6997 6190 9 1821 230 0 33 0 chrX 162090386 162090416 -4559880 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 1821 466 289 76 30 chrX 162090677 162090809 -4559487 - ID_B1 SINE B4 -7 217 80 9 1821 363 23 0 0 chrX 162091283 162091327 -4558969 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 1821 247 380 35 0 chrX 162091619 162091761 -4558535 + MER5B DNA MER1_type 28 174 -4 9 1821 209 57 29 0 chrX 162091896 162091931 -4558365 + (TTTTTG)n Simple_repeat Simple_repeat 5 40 0 1 1821 712 189 43 7 chrX 162091931 162092070 -4558226 - B1_Mus1 SINE Alu 0 148 5 1 1821 181 356 92 8 chrX 162092082 162092212 -4558084 - MER5A DNA MER1_type -45 144 4 1 1821 7167 85 1 1 chrX 162092373 162093888 -4556408 - L1Md_F2 LINE L1 -2 6580 5066 1 1821 13211 53 5 2 chrX 162093881 162096342 -4553954 - L1Md_F2 LINE L1 0 6582 4120 1 1821 6517 63 1 0 chrX 162096338 162097208 -4553088 - L1_Mm LINE L1 -121 5762 4892 1 1821 3940 132 40 35 chrX 162097202 162098170 -4552126 - L1Md_F LINE L1 -4480 1406 408 1 1821 514 206 0 0 chrX 162098170 162098272 -4552024 - L1VL1 LINE L1 -6156 266 165 1 1821 3691 101 57 45 chrX 162099615 162100216 -4550080 + L1_Mus3 LINE L1 6031 6638 0 1 1821 206 244 0 0 chrX 162100840 162100881 -4549415 + (CATATA)n Simple_repeat Simple_repeat 4 44 0 1 1821 710 389 32 27 chrX 162100932 162101270 -4549026 + MLT1H LTR MaLR 107 446 -103 1 1821 867 279 5 0 chrX 162101945 162102153 -4548143 + B3 SINE B2 2 210 -6 1 1821 383 267 121 37 chrX 162102173 162102487 -4547809 + Lx8 LINE L1 7128 7471 -2 1 1821 327 35 53 0 chrX 162103368 162103425 -4546871 + (TGG)n Simple_repeat Simple_repeat 2 61 0 1 1821 763 158 8 0 chrX 162103681 162103808 -4546488 + B1_Mur2 SINE Alu 21 148 -1 1 1821 341 333 75 20 chrX 162103848 162104102 -4546194 - L2 LINE L2 -1259 2160 1893 1 1821 659 299 103 0 chrX 162104446 162104640 -4545656 + B4A SINE B4 2 215 -77 1 1821 432 145 12 24 chrX 162104640 162104725 -4545571 - ORR1A4 LTR MaLR -2 327 244 1 1821 2368 134 43 43 chrX 162104728 162105196 -4545100 - IAPLTR2_Mm LTR ERVK -7 468 1 1 1821 1559 167 4 0 chrX 162105196 162105448 -4544848 - ORR1A4 LTR MaLR -76 253 1 1 1821 249 295 115 0 chrX 162105448 162105523 -4544773 + B4A SINE B4 209 292 0 1 1821 279 0 0 0 chrX 162105553 162105584 -4544712 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1 1821 198 0 0 0 chrX 162105584 162105606 -4544690 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 1821 253 343 152 49 chrX 162105958 162106182 -4544114 + MLT1J2 LTR MaLR 97 343 -105 1 1821 1068 253 48 62 chrX 162106224 162106275 -4544021 - MT2B LTR ERVL 0 601 550 1 1821 324 0 0 0 chrX 162106275 162106311 -4543985 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1821 1068 268 74 57 chrX 162106311 162106801 -4543495 - MT2B LTR ERVL -52 549 1 1 1821 304 189 38 95 chrX 162107371 162107476 -4542820 - RLTR10 LTR ERVK 0 390 292 1 1821 1279 41 18 0 chrX 162107501 162107670 -4542626 - RLTR10-int LTR ERVK -1775 212 41 1 1821 3121 47 10 0 chrX 162107682 162108066 -4542230 - RLTR10 LTR ERVK -2 388 1 1 1821 218 361 12 12 chrX 162108560 162108644 -4541652 + MIRb SINE MIR 38 121 -147 1 1821 183 300 16 91 chrX 162108885 162109006 -4541290 + L2b LINE L2 3050 3161 -214 1 1821 603 199 184 0 chrX 162109015 162109151 -4541145 + ORR1D1 LTR MaLR 1 161 -213 1 1821 1362 234 35 58 chrX 162109159 162109586 -4540710 + L1_Mur3 LINE L1 280 696 -7016 1 1821 201 255 0 0 chrX 162109614 162109665 -4540631 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1 1821 413 199 13 93 chrX 162109670 162109820 -4540476 + Lx7 LINE L1 7375 7512 -184 1 1821 1252 95 0 14 chrX 162109858 162110230 -4540066 + (GAAA)n Simple_repeat Simple_repeat 1 366 0 1 1821 556 306 201 8 chrX 162110787 162111041 -4539255 - RMER15 LTR ERVL 0 575 273 1 1821 188 34 0 33 chrX 162112229 162112259 -4538037 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1821 769 321 55 0 chrX 162113027 162113298 -4536998 - MER58B DNA MER1_type 0 341 56 1 1821 471 338 32 50 chrX 162113313 162113596 -4536700 + B4A SINE B4 2 279 -13 1 1821 480 62 0 0 chrX 162113646 162113710 -4536586 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 1821 387 0 0 0 chrX 162114303 162114346 -4535950 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1821 411 21 0 0 chrX 162114400 162114448 -4535848 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1821 537 16 0 0 chrX 162114448 162114509 -4535787 + (GA)n Simple_repeat Simple_repeat 1 62 0 1 1821 258 350 53 62 chrX 162114658 162114999 -4535297 - L2a LINE L2 -51 3375 3038 1 1821 671 268 22 0 chrX 162115297 162115435 -4534861 + ID_B1 SINE B4 81 221 -3 1 1821 223 286 43 0 chrX 162116498 162116568 -4533728 + MIRm SINE MIR 91 163 -113 1 1821 561 305 56 101 chrX 162116691 162116997 -4533299 + B4A SINE B4 1 292 0 1 1821 324 91 45 0 chrX 162117437 162117503 -4532793 + (TTTG)n Simple_repeat Simple_repeat 3 71 0 1 1821 423 0 0 0 chrX 162118947 162118994 -4531302 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1821 580 321 26 19 chrX 162119052 162119322 -4530974 - B4A SINE B4 -17 275 4 1 1821 747 322 50 50 chrX 162120201 162120521 -4529775 - MER58B DNA MER1_type 0 341 22 1 1821 396 59 0 0 chrX 162120660 162120711 -4529585 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1821 365 314 90 34 chrX 162120817 162120995 -4529301 - Tigger13a DNA MER2_type -270 501 314 1 1821 919 97 14 0 chrX 162121017 162121161 -4529135 - URR1A DNA MER1_type 0 226 81 1 1821 600 14 0 0 chrX 162121280 162121349 -4528947 + (TC)n Simple_repeat Simple_repeat 2 70 0 1 1821 315 0 0 0 chrX 162121349 162121383 -4528913 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1821 1169 82 0 0 chrX 162121969 162122115 -4528181 + B1_Mus2 SINE Alu 1 146 -1 1 1821 413 235 70 20 chrX 162122695 162122795 -4527501 - MTEa LTR MaLR -112 267 163 1 1821 255 177 129 0 chrX 162122810 162122872 -4527424 - Lx5 LINE L1 -3 7047 6978 1 1821 649 135 53 0 chrX 162122879 162123012 -4527284 - Lx9 LINE L1 -3 7641 7502 1 1821 468 0 0 0 chrX 162123014 162123066 -4527230 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 1 1821 192 77 0 0 chrX 162123261 162123287 -4527009 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1821 1525 184 51 0 chrX 162123288 162123603 -4526693 - Lx9 LINE L1 -162 7482 7152 1 1821 986 304 95 5 chrX 162123588 162123958 -4526338 - Lx6 LINE L1 -20 7440 7038 1 1821 995 261 95 25 chrX 162123935 162124292 -4526004 - Lx6 LINE L1 -562 6898 6517 1 1821 405 0 0 0 chrX 162124326 162124371 -4525925 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1821 3023 193 32 52 chrX 162124409 162124909 -4525387 - L1_Mur3 LINE L1 -3828 2049 1571 1 1821 4194 39 2 0 chrX 162124909 162125403 -4524893 + L1Md_T LINE L1 6088 6582 0 1 1821 3023 193 32 52 chrX 162125403 162125766 -4524530 - L1_Mur3 LINE L1 -4307 1570 1203 1 1821 5910 107 8 18 chrX 162125781 162126729 -4523567 - L1_Mus3 LINE L1 0 6638 5700 1 1821 4368 132 12 0 chrX 162126728 162127456 -4522840 + L1_Mus3 LINE L1 4931 5667 -216 1 1821 436 174 52 8 chrX 162127543 162127682 -4522614 - L1_Mur3 LINE L1 -6507 1221 1008 1 1821 4148 163 128 9 chrX 162127683 162128474 -4521822 + RMER19B LTR ERVK 2 886 -16 1 1821 816 131 62 0 chrX 162128475 162128605 -4521691 + B1_Mus1 SINE Alu 2 139 -9 1 1821 197 33 33 0 chrX 162128605 162128635 -4521661 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1821 552 272 11 16 chrX 162128644 162128827 -4521469 - L1_Mur3 LINE L1 -6655 1073 892 1 1821 787 171 13 6 chrX 162129419 162129578 -4520718 - Lx9 LINE L1 -499 7145 6986 1 1821 982 296 27 20 chrX 162129580 162129876 -4520420 + Lx6 LINE L1 7078 7375 -85 1 1821 719 104 0 9 chrX 162129893 162130009 -4520287 + (GGAA)n Simple_repeat Simple_repeat 3 117 0 1 1821 568 199 15 8 chrX 162130020 162130152 -4520144 - Lx9 LINE L1 -644 7000 6868 1 1821 687 254 0 119 chrX 162130155 162130356 -4519940 - MTE2b LTR MaLR -202 177 1 1 1821 195 248 0 0 chrX 162130614 162130719 -4519577 + T-rich Low_complexity Low_complexity 1 105 0 1 1821 23 101 0 0 chrX 162131103 162131182 -4519114 + AT_rich Low_complexity Low_complexity 1 79 0 1 1821 246 219 31 0 chrX 162131422 162131486 -4518810 + (TA)n Simple_repeat Simple_repeat 1 66 0 1 1821 257 271 52 40 chrX 162131957 162132130 -4518166 - L1MC4a LINE L1 -23 7859 7685 1 1821 642 282 40 30 chrX 162132182 162132383 -4517913 + B3A SINE B2 9 211 -5 1 1821 2298 220 68 38 chrX 162132507 162133390 -4516906 + L1_Mus1 LINE L1 275 1208 -5433 1 1821 27881 118 16 6 chrX 162133397 162134823 -4515473 + L1_Mus1 LINE L1 993 2500 -3386 1 1821 288 0 0 0 chrX 162134823 162134855 -4515441 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 1821 27881 118 17 2 chrX 162134855 162135213 -4515083 + L1_Mus1 LINE L1 2501 2868 -3018 1 1821 411 21 0 0 chrX 162135213 162135261 -4515035 + (GAAA)n Simple_repeat Simple_repeat 3 50 0 1 227 27881 106 14 3 chrX 162135261 162138912 -4511384 + L1_Mus1 LINE L1 2869 6570 0 1 1822 33582 50 0 3 chrX 162139129 162144592 -4505704 + L1Md_T LINE L1 50 5589 -297 1 1822 8291 43 0 0 chrX 162144592 162145588 -4504708 + L1Md_T LINE L1 5590 6585 0 1 1822 382 222 0 0 chrX 162146315 162146387 -4503909 + MIRb SINE MIR 191 262 -6 1 1822 445 297 33 20 chrX 162146796 162146947 -4503349 - MER20 DNA MER1_type -66 153 1 1 1822 337 255 72 9 chrX 162147375 162147486 -4502810 + LTR50 LTR ERVL 106 223 -572 1 1822 1080 314 11 11 chrX 162147486 162147859 -4502437 + ERVL-E-int LTR ERVL 4116 4488 -1179 1 1822 289 273 13 13 chrX 162147860 162147938 -4502358 - ID4_ SINE ID -4 79 2 1 1822 288 277 12 0 chrX 162148225 162148308 -4501988 + ERVL-E-int LTR ERVL 4888 4971 -743 1 1822 255 21 85 0 chrX 162148310 162148357 -4501939 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 1 1822 23 0 0 0 chrX 162148749 162148772 -4501524 + AT_rich Low_complexity Low_complexity 1 23 0 1 1822 751 306 16 22 chrX 162148772 162148956 -4501340 - B3 SINE B2 -6 210 28 1 1822 942 230 0 35 chrX 162149077 162149275 -4501021 + B3A SINE B2 7 197 -1 1 1822 1052 260 77 32 chrX 162149996 162150501 -4499795 - L1MB7 LINE L1 -45 6139 5612 1 1822 370 267 0 65 chrX 162150511 162150619 -4499677 - PB1D9 SINE Alu -7 113 13 1 1822 1335 337 116 38 chrX 162151076 162152244 -4498052 - L2a LINE L2 -1 3425 2145 1 1822 6194 64 53 2 chrX 162152303 162153158 -4497138 + L1_Mus2 LINE L1 5669 6566 0 1 1822 538 254 164 21 chrX 162153612 162153801 -4496495 + B3 SINE B2 1 216 0 1 1822 4949 116 40 7 chrX 162154480 162155237 -4495059 - Lx LINE L1 -1 6653 5872 1 1822 723 50 10 0 chrX 162155239 162155340 -4494956 - L1_Mm LINE L1 -3958 1925 1824 1 1822 822 84 0 0 chrX 162155340 162155447 -4494849 - U6 snRNA snRNA 0 107 1 1 1822 1663 104 6 19 chrX 162155447 162155812 -4494484 - L1VL2 LINE L1 -2429 1186 827 1 1822 303 303 175 31 chrX 162155812 162156006 -4494290 - RMER12 LTR ERVK 0 1322 1101 1 1822 1016 135 51 15 chrX 162156237 162156432 -4493864 - RLTR22_Mur LTR ERVK -998 850 649 1 1822 8258 61 0 0 chrX 162156432 162157546 -4492750 - L1_Mm LINE L1 -1155 4728 3615 2 1822 5019 67 1 1 chrX 162157546 162158208 -4492088 - RLTR22_Mus LTR ERVK -1146 662 1 2 1822 4128 118 46 16 chrX 162158208 162158898 -4491398 - L1VL2 LINE L1 -5503 832 122 2 1822 351 262 145 28 chrX 162159936 162160081 -4490215 + MER5B DNA MER1_type 16 177 -1 2 1822 525 292 56 0 chrX 162160092 162160236 -4490060 + MER58A DNA MER1_type 1 152 -72 2 1822 607 321 61 0 chrX 162160506 162160702 -4489594 + LTR50 LTR ERVL 3 210 -585 2 1822 578 346 18 22 chrX 162160820 162161042 -4489254 + B4 SINE B4 2 222 -70 2 1822 557 118 0 9 chrX 162161091 162161202 -4489094 + (GA)n Simple_repeat Simple_repeat 1 110 0 2 1822 288 0 0 0 chrX 162162220 162162252 -4488044 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 2 1822 408 20 0 0 chrX 162162611 162162660 -4487636 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 2 1822 817 90 0 0 chrX 162162660 162162771 -4487525 - B1_Mus1 SINE Alu -10 138 28 2 1822 297 333 0 10 chrX 162163228 162163331 -4486965 - MER5B DNA MER1_type -62 116 15 2 1822 273 269 48 136 chrX 162163331 162163456 -4486840 - MER81 DNA AcHobo 0 114 1 2 1822 596 267 15 0 chrX 162163854 162163989 -4486307 - B1_Mur3 SINE Alu -8 141 5 2 1822 3102 245 35 24 chrX 162164239 162165021 -4485275 + L1_Rod LINE L1 443 1243 -6365 2 1822 2764 64 3 3 chrX 162165021 162165383 -4484913 + L1_Mus1 LINE L1 6206 6567 0 2 1822 3102 187 72 36 chrX 162165383 162166102 -4484194 + L1_Rod LINE L1 1244 1990 -3857 2 1822 4974 73 0 12 chrX 162166102 162166766 -4483530 + L1_Mus1 LINE L1 5912 6567 0 2 1822 2714 187 72 36 chrX 162166766 162166872 -4483424 + L1_Rod LINE L1 1991 2101 -3746 2 1822 33910 73 3 2 chrX 162166884 162172107 -4478189 + L1Md_F3 LINE L1 402 5586 -297 2 1822 7846 48 5 1 chrX 162172108 162173087 -4477209 + L1Md_F3 LINE L1 5588 6570 -14 2 1822 3804 166 46 0 chrX 162173131 162173810 -4476486 + L1Md_F LINE L1 256 965 -5554 2 1822 37782 13 1 7 chrX 162173810 162179015 -4471281 + L1Md_A LINE L1 422 5586 -297 2 1822 8696 20 0 0 chrX 162179016 162180011 -4470285 + L1Md_A LINE L1 5588 6582 0 2 1822 30162 94 5 3 chrX 162180013 162180941 -4469355 + L1Md_F2 LINE L1 938 1964 -3922 2 1822 203 61 30 0 chrX 162180941 162180974 -4469322 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 2 1822 30162 96 3 4 chrX 162180974 162184601 -4465695 + L1Md_F2 LINE L1 1965 5589 -297 2 1822 7426 80 0 9 chrX 162184602 162185603 -4464693 + L1Md_F2 LINE L1 5591 6582 -3 2 1822 934 167 0 143 chrX 162185608 162185853 -4464443 + Lx LINE L1 2117 2326 -3521 2 1822 4748 217 101 62 chrX 162185855 162187173 -4463123 + Lx LINE L1 3891 5325 -1329 2 1822 493 143 33 0 chrX 162187173 162187264 -4463032 + B2_Mm2 SINE B2 94 187 -8 2 1822 4748 217 101 62 chrX 162187264 162188480 -4461816 + Lx LINE L1 5326 6651 -3 2 1822 761 312 57 28 chrX 162190339 162190586 -4459710 - MLT1F1 LTR MaLR -302 267 14 2 1822 13898 45 6 0 chrX 162190587 162192993 -4457303 - L1Md_F2 LINE L1 0 6582 4166 2 1822 492 257 54 0 chrX 162193517 162193665 -4456631 + L1MA4A LINE L1 5782 5937 -366 2 1822 26 0 0 0 chrX 162193833 162193859 -4456437 + AT_rich Low_complexity Low_complexity 1 26 0 2 1822 330 331 27 113 chrX 162193866 162194016 -4456280 + B4A SINE B4 1 137 -155 2 1822 231 316 0 17 chrX 162194051 162194109 -4456187 + B4A SINE B4 232 288 -4 2 1822 1172 240 29 11 chrX 162195078 162195352 -4454944 - Lx6 LINE L1 -26 7434 7156 2 1822 504 0 0 0 chrX 162197705 162197761 -4452535 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1822 2215 73 20 7 chrX 162197949 162198253 -4452043 - MT2C_Mm LTR ERVL -167 308 1 2 1822 480 266 93 24 chrX 162198855 162199000 -4451296 + MLT1I LTR MaLR 20 173 -238 2 1822 532 201 165 44 chrX 162199037 162199219 -4451077 + Lx9 LINE L1 7399 7602 -42 2 1822 421 320 0 0 chrX 162199389 162199489 -4450807 + MLT1I LTR MaLR 258 357 -54 2 1822 1080 281 105 44 chrX 162200244 162200787 -4449509 - L1ME3A LINE L1 -36 6137 5562 2 1822 236 264 42 0 chrX 162201242 162201314 -4448982 - MIRb SINE MIR -87 181 107 2 1822 807 325 73 24 chrX 162201647 162201987 -4448309 - ORR1E LTR MaLR -2 357 1 2 1822 367 328 40 16 chrX 162201987 162202087 -4448209 - ORR1E-int LTR MaLR -55 1525 1423 2 1822 3514 306 94 20 chrX 162202087 162203310 -4446986 - ORR1E-int LTR MaLR -259 1321 8 2 1822 837 298 79 82 chrX 162203321 162203675 -4446621 - ORR1E LTR MaLR -6 353 1 2 1822 205 51 0 49 chrX 162204060 162204101 -4446195 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1822 453 306 142 33 chrX 162206235 162206475 -4443821 + MER63D DNA AcHobo 6 271 -790 2 1822 400 278 145 42 chrX 162206576 162206595 -4443701 + CYRA11_Mm Unknown Y-chromosome 155 211 -406 2 1822 880 150 0 0 chrX 162206595 162206735 -4443561 - URR1B DNA MER1_type 0 225 86 2 1822 400 278 145 42 chrX 162206735 162206790 -4443506 + CYRA11_Mm Unknown Y-chromosome 212 390 -227 2 1822 258 32 0 0 chrX 162208154 162208185 -4442111 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1822 7517 93 4 0 chrX 162208521 162210119 -4440177 + L1_Mus1 LINE L1 4964 6567 0 2 1822 24 77 0 0 chrX 162210164 162210216 -4440080 + AT_rich Low_complexity Low_complexity 1 52 0 2 1822 217 186 23 0 chrX 162210225 162210268 -4440028 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 2 1822 200 31 0 59 chrX 162210324 162210358 -4439938 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2 1822 2553 216 170 30 chrX 162210362 162211294 -4439002 - Lx5 LINE L1 -35 7015 5954 2 1822 229 238 66 47 chrX 162211307 162211413 -4438883 - Lx8 LINE L1 0 7473 7366 2 1822 414 0 0 0 chrX 162211413 162211459 -4438837 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1822 1636 306 20 18 chrX 162211460 162212003 -4438293 - Lx8 LINE L1 -144 7329 6786 2 1822 599 274 44 33 chrX 162212050 162212324 -4437972 + L1MA6 LINE L1 6012 6295 -5 2 1822 333 0 0 0 chrX 162213262 162213299 -4436997 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1822 181 362 24 24 chrX 162213299 162213381 -4436915 - L2b LINE L2 -23 3352 3271 2 1822 22 0 0 0 chrX 162213696 162213718 -4436578 + AT_rich Low_complexity Low_complexity 1 22 0 2 1822 6471 168 24 103 chrX 162214159 162214521 -4435775 - Lx5 LINE L1 -442 5752 5349 2 1822 3758 118 116 3 chrX 162214521 162215143 -4435153 - Lx2A1 LINE L1 -3 7005 6314 2 1822 6471 147 13 113 chrX 162215143 162216324 -4433972 - Lx5 LINE L1 -529 5348 4305 2 1822 2230 176 22 30 chrX 162216320 162216825 -4433471 - Lx5 LINE L1 -3450 2427 1927 2 1822 1535 243 65 93 chrX 162216825 162217408 -4432888 + RLTR13A LTR ERVK 1 573 -356 2 1822 3293 194 23 18 chrX 162217408 162218495 -4431801 - Lx5 LINE L1 -3994 1892 805 2 1822 359 103 0 14 chrX 162219294 162219363 -4430933 - Lx3A LINE L1 -3 6978 6911 2 1822 701 303 14 28 chrX 162220463 162220680 -4429616 + B3 SINE B2 1 214 -2 2 1822 1316 125 16 0 chrX 162220872 162221064 -4429232 - B2_Mm2 SINE B2 0 195 1 2 1822 235 340 109 39 chrX 162221497 162221653 -4428643 + MLT1E1 LTR MaLR 302 468 -186 2 1822 31386 102 13 4 chrX 162221656 162225442 -4424854 + L1Md_F2 LINE L1 481 4284 -1599 2 1822 6505 42 15 0 chrX 162225442 162226184 -4424112 + L1Md_F3 LINE L1 5829 6581 -3 2 1822 31386 81 14 4 chrX 162226184 162227498 -4422798 + L1Md_F2 LINE L1 4285 5585 -298 2 1822 7765 79 17 2 chrX 162227499 162228480 -4421816 + L1Md_F2 LINE L1 5587 6582 0 2 1822 21 0 0 0 chrX 162228601 162228622 -4421674 + AT_rich Low_complexity Low_complexity 1 21 0 2 1822 41190 16 1 6 chrX 162228622 162234825 -4415471 - L1Md_A LINE L1 0 6582 416 2 1822 299 368 15 7 chrX 162234891 162235028 -4415268 + MLT1E1 LTR MaLR 517 654 0 2 1822 442 275 62 48 chrX 162235386 162235531 -4414765 - B1F SINE Alu -2 147 1 2 1822 417 295 55 55 chrX 162235531 162235551 -4414745 - ID_B1 SINE B4 -2 222 58 2 1822 243 170 0 0 chrX 162235608 162235655 -4414641 + (TATG)n Simple_repeat Simple_repeat 1 47 0 2 1822 3312 59 15 0 chrX 162236189 162236579 -4413717 - MTA_Mm LTR MaLR 0 396 1 2 1822 2212 182 10 42 chrX 162236594 162236676 -4413620 - ORR1B1 LTR MaLR 0 394 318 2 1822 3119 93 34 0 chrX 162236676 162237084 -4413212 - BGLII_Mus LTR ERVK 0 422 1 2 1822 2212 182 10 42 chrX 162237084 162237407 -4412889 - ORR1B1 LTR MaLR -77 317 2 2 1822 1065 132 26 93 chrX 162237404 162237485 -4412811 - ORR1B1-int LTR MaLR -3 1506 1440 2 1822 856 176 0 14 chrX 162237485 162237623 -4412673 + B1_Mus1 SINE Alu 3 138 -10 2 1822 339 85 0 0 chrX 162237629 162237676 -4412620 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 2 1822 1065 132 26 93 chrX 162237676 162237813 -4412483 - ORR1B1-int LTR MaLR -72 1437 1296 2 1822 297 231 39 0 chrX 162237810 162237862 -4412434 - PB1D9 SINE Alu -64 56 3 2 1822 1165 178 95 70 chrX 162237875 162238246 -4412050 - ORR1B1 LTR MaLR -892 617 5 2 1822 234 139 0 0 chrX 162238318 162238354 -4411942 - MER3 DNA MER1_type -84 125 90 2 1822 388 372 0 7 chrX 162239124 162239262 -4411034 - MER5A DNA MER1_type -42 147 11 2 1822 1526 50 5 1 chrX 162239686 162239897 -4410399 - ORR1A0 LTR MaLR 0 346 109 2 1822 228 266 175 12 chrX 162240059 162240139 -4410157 + MER20 DNA MER1_type 7 99 -120 2 1822 271 167 15 15 chrX 162240162 162240229 -4410067 + CT-rich Low_complexity Low_complexity 1 67 0 2 1822 298 284 75 0 chrX 162240278 162240345 -4409951 + ID4_ SINE ID 4 75 -8 2 1822 528 16 0 0 chrX 162240346 162240407 -4409889 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 2 1822 3093 163 88 42 chrX 162240470 162241130 -4409166 - RMER6C LTR ERVK 0 690 1 2 1822 249 210 15 75 chrX 162241164 162241231 -4409065 + ID4_ SINE ID 8 70 -13 2 1822 218 32 0 31 chrX 162241258 162241290 -4409006 + (TTA)n Simple_repeat Simple_repeat 3 33 0 2 1822 278 326 0 23 chrX 162241500 162241588 -4408708 + RSINE1 SINE B4 76 161 -4 2 1822 720 85 0 36 chrX 162242310 162242420 -4407876 + L1_Mus1 LINE L1 6462 6567 0 2 1822 2942 157 5 31 chrX 162244214 162244766 -4405530 + L1Md_F LINE L1 109 646 -5873 2 1822 1932 143 244 30 chrX 162244877 162245344 -4404952 + RLTR6_Mm LTR ERV1 37 603 -51 2 1822 64953 33 23 0 chrX 162245345 162252951 -4397345 + RLTR6-int LTR ERV1 1 7778 0 2 1822 1900 136 254 31 chrX 162253064 162253512 -4396784 + RLTR6_Mm LTR ERV1 37 584 -70 2 1822 32776 77 2 3 chrX 162253512 162258378 -4391918 + L1Md_F2 LINE L1 629 5588 -298 2 1822 8455 51 4 3 chrX 162258379 162259371 -4390925 + L1Md_F2 LINE L1 5590 6582 -3 2 1822 790 298 19 10 chrX 162259584 162259791 -4390505 + B3 SINE B2 1 209 -7 2 1822 392 65 0 0 chrX 162259816 162259862 -4390434 + L1Md_F2 LINE L1 5541 5586 -297 2 1822 8171 56 13 7 chrX 162259863 162260852 -4389444 + L1Md_F2 LINE L1 5588 6582 0 2 1822 246 184 0 75 chrX 162261466 162261519 -4388777 - B3A SINE B2 -147 51 3 2 1822 342 276 101 37 chrX 162261610 162261719 -4388577 - PB1D9 SINE Alu 0 120 5 2 1822 282 258 0 0 chrX 162261893 162261955 -4388341 - B3 SINE B2 -150 66 5 2 1822 477 0 0 0 chrX 162261956 162262009 -4388287 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 2 1822 1079 346 102 16 chrX 162262010 162262586 -4387710 + Lx8 LINE L1 6727 7352 -121 2 1822 218 196 0 0 chrX 162263606 162263652 -4386644 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1822 945 64 11 103 chrX 162264151 162264326 -4385970 - RLTR45-int LTR ERVK -5918 1326 1168 2 1822 407 168 19 19 chrX 162264494 162264597 -4385699 - RLTR45-int LTR ERVK -6058 1186 1084 2 1822 3827 58 15 0 chrX 162264618 162265080 -4385216 - L1Md_F3 LINE L1 0 6584 6116 2 1822 21 0 0 0 chrX 162265293 162265314 -4384982 + AT_rich Low_complexity Low_complexity 1 21 0 2 227 7757 111 9 31 chrX 162265337 162267510 -4382786 + L1VL4 LINE L1 2 2125 -1434 2 1823 6310 92 2 0 chrX 162267485 162268350 -4381946 + L1_Mm LINE L1 4537 5403 -480 3 1823 3688 52 28 2 chrX 162268350 162268775 -4381521 + RLTR10C LTR ERVK 1 436 0 3 1823 2704 76 0 0 chrX 162268775 162269118 -4381178 + MMERVK10C-int LTR ERVK 1 343 -7238 3 1823 796 196 5 5 chrX 162269123 162269308 -4380988 + MMERVK10C-int LTR ERVK 735 919 -6662 3 1823 411 143 0 95 chrX 162269314 162269430 -4380866 + MMERVK10C-int LTR ERVK 844 948 -6633 3 1823 688 205 88 48 chrX 162269520 162269762 -4380534 + RMER16-int LTR ERVK 312 455 -4951 3 1823 356 231 148 40 chrX 162269757 162269906 -4380390 + MMERVK10C-int LTR ERVK 524 688 -5449 3 1823 42509 48 3 13 chrX 162269890 162275099 -4375197 + MMERVK10C-int LTR ERVK 1721 7581 0 3 1823 3650 47 31 2 chrX 162275099 162275523 -4374773 + RLTR10C LTR ERVK 1 436 0 3 1823 5582 131 48 39 chrX 162275523 162276743 -4373553 + L1_Mus3 LINE L1 5399 6633 -5 3 1823 14430 162 66 48 chrX 162276734 162278323 -4371973 + Lx2 LINE L1 2455 4072 -1814 3 1823 630 0 0 0 chrX 162278323 162278393 -4371903 + (TC)n Simple_repeat Simple_repeat 2 71 0 3 1823 14430 147 37 38 chrX 162278393 162281020 -4369276 + Lx2 LINE L1 4072 6648 -349 3 1823 1017 150 108 5 chrX 162281000 162281214 -4369082 + Lx2 LINE L1 6762 6997 0 3 1823 21 0 0 0 chrX 162281990 162282011 -4368285 + AT_rich Low_complexity Low_complexity 1 21 0 3 1823 840 134 8 0 chrX 162282125 162282259 -4368037 - RMER19A LTR ERVK 0 737 603 3 1823 248 0 0 30 chrX 162282266 162282299 -4367997 + (TTA)n Simple_repeat Simple_repeat 2 33 0 3 1823 3252 225 41 22 chrX 162282299 162283122 -4367174 - Lx2B LINE L1 -28 6972 6134 3 1823 2080 229 60 15 chrX 162283122 162283669 -4366627 - RMER19A LTR ERVK -205 532 1 3 1823 261 310 32 32 chrX 162285398 162285648 -4364648 - MERVK26-int LTR ERVK -2037 4882 4633 3 1823 441 0 0 0 chrX 162285678 162285727 -4364569 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1823 429 20 0 0 chrX 162285727 162285776 -4364520 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1823 3528 65 0 2 chrX 162287304 162287781 -4362515 + L1_Mus2 LINE L1 5650 6125 -441 3 1823 2604 41 25 0 chrX 162287781 162288100 -4362196 + IAPLTR2b LTR ERVK 1 327 0 3 1823 550 184 0 9 chrX 162288100 162288111 -4362185 + Lx2 LINE L1 6474 6484 -513 3 1823 781 128 41 2 chrX 162288111 162288250 -4362046 + IAPEz-int LTR ERVK 13 193 -6288 3 1823 226 327 0 0 chrX 162288250 162288305 -4361991 + RLTR27 LTR ERVK 221 275 -34 3 1823 4685 74 67 54 chrX 162288305 162289195 -4361101 + IAPEz-int LTR ERVK 168 994 -5487 3 1823 411 70 0 0 chrX 162289196 162289253 -4361043 + B1_Mus1 SINE Alu 1 57 -91 3 1823 19029 85 1 23 chrX 162289274 162292792 -4357504 - L1Md_F LINE L1 -1969 3914 478 3 1823 199 345 126 0 chrX 162295038 162295125 -4355171 + L2b LINE L2 3270 3367 -8 3 1823 549 0 0 0 chrX 162296337 162296398 -4353898 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 1823 4251 152 19 15 chrX 162296399 162297085 -4353211 - RLTR17 LTR ERVK -2 690 2 3 1823 270 0 0 0 chrX 162297086 162297116 -4353180 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1823 327 257 160 9 chrX 162297116 162297222 -4353074 + B3A SINE B2 82 203 -13 3 1823 451 348 77 68 chrX 162297686 162298154 -4352142 + LTR16A1 LTR ERVL 13 440 -16 3 1823 278 250 57 57 chrX 162298195 162298352 -4351944 - L1MA7 LINE L1 0 6291 6135 3 1823 207 0 0 0 chrX 162300315 162300338 -4349958 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1823 1080 78 0 0 chrX 162300363 162300505 -4349791 - B1_Mus2 SINE Alu 0 147 6 3 1823 25706 108 45 10 chrX 162301855 162305341 -4344955 - L1_Mus2 LINE L1 -2 6564 2867 3 1823 483 18 0 0 chrX 162305341 162305397 -4344899 + (TTTC)n Simple_repeat Simple_repeat 3 58 0 3 1823 25706 96 44 13 chrX 162305397 162307584 -4342712 - L1_Mus2 LINE L1 -3017 2866 680 3 1823 2137 123 15 6 chrX 162307584 162307918 -4342378 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 1823 19902 44 28 16 chrX 162307928 162310534 -4339762 + IAPEz-int LTR ERVK 35 2670 -3811 3 1823 8264 47 9 13 chrX 162310515 162311596 -4338700 + IAPEz-int LTR ERVK 5403 6479 -2 3 1823 2137 123 15 6 chrX 162311598 162311932 -4338364 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 1823 315 106 0 0 chrX 162311932 162311979 -4338317 - L1_Mus2 LINE L1 -5953 685 639 3 1823 1682 113 0 4 chrX 162311977 162312234 -4338062 - L1_Mus2 LINE L1 -6133 505 250 3 1823 1268 220 99 25 chrX 162312234 162312626 -4337670 - L1Md_F LINE L1 -5660 859 439 3 1823 972 224 31 87 chrX 162312631 162312971 -4337325 - L1VL1 LINE L1 -5926 496 4 3 1823 2317 273 23 28 chrX 162314086 162314996 -4335300 - L1M4c LINE L1 -5116 1268 363 3 1823 4478 126 80 5 chrX 162315487 162315816 -4334480 + RMER17D2 LTR ERVK 4 346 -463 3 1823 506 43 14 0 chrX 162315816 162315885 -4334411 + (TCTCC)n Simple_repeat Simple_repeat 2 71 0 3 1823 4478 126 80 5 chrX 162315885 162316305 -4333991 + RMER17D2 LTR ERVK 347 808 -1 3 1823 293 263 40 0 chrX 162316725 162316801 -4333495 - PB1D9 SINE Alu 0 120 42 3 1823 1900 166 62 111 chrX 162316805 162316997 -4333299 + MTC LTR MaLR 1 210 -211 3 1823 3555 69 0 2 chrX 162316997 162317448 -4332848 + L1_Mus1 LINE L1 6112 6561 -6 3 1823 1900 166 62 111 chrX 162317448 162317689 -4332607 + MTC LTR MaLR 211 413 -8 3 1823 341 225 40 32 chrX 162318578 162318702 -4331594 - Lx8 LINE L1 0 7473 7349 3 1823 615 92 0 0 chrX 162319409 162319496 -4330800 + (TTCC)n Simple_repeat Simple_repeat 3 89 0 3 1823 23 0 0 0 chrX 162320303 162320326 -4329970 + AT_rich Low_complexity Low_complexity 1 23 0 3 1823 849 330 77 16 chrX 162320644 162321085 -4329211 - Lx8 LINE L1 -76 7397 6930 3 1823 5097 96 19 1 chrX 162321091 162321821 -4328475 - L1Md_F2 LINE L1 0 6582 5840 3 1823 7440 48 16 6 chrX 162321943 162323590 -4326706 - L1Md_F2 LINE L1 -2 6580 4916 3 1823 5947 40 1 3 chrX 162323833 162324559 -4325737 - L1Md_F3 LINE L1 0 6584 5860 3 1823 2559 60 0 0 chrX 162324559 162324890 -4325406 + L1Md_F3 LINE L1 5510 5840 -43 3 1823 246 128 0 0 chrX 162325244 162325283 -4325013 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 1823 36 23 0 0 chrX 162325400 162325443 -4324853 + AT_rich Low_complexity Low_complexity 1 43 0 3 1823 1788 184 58 0 chrX 162325472 162325819 -4324477 + ORR1B2 LTR MaLR 1 367 0 3 1823 454 224 9 67 chrX 162325837 162325942 -4324354 - 5S rRNA rRNA -18 103 5 3 1823 694 326 21 0 chrX 162325969 162326202 -4324094 + Lx8 LINE L1 7079 7316 -157 3 1823 1830 48 0 0 chrX 162326247 162326477 -4323819 - L1Md_F2 LINE L1 -106 5777 5548 3 1823 6718 31 15 5 chrX 162326477 162327283 -4323013 + L1Md_F2 LINE L1 5767 6580 -2 3 1823 258 279 138 66 chrX 162327412 162327805 -4322491 - L1ME3 LINE L1 -7 6157 5752 3 1823 791 68 0 17 chrX 162328308 162328428 -4321868 + (TTC)n Simple_repeat Simple_repeat 1 118 0 3 1823 22 0 0 0 chrX 162328808 162328830 -4321466 + AT_rich Low_complexity Low_complexity 1 22 0 3 1823 285 348 57 33 chrX 162329448 162329570 -4320726 + RMER20B LTR ERVK 1 125 -502 3 1823 1030 211 28 19 chrX 162330781 162330993 -4319303 + B3 SINE B2 1 214 -2 3 1823 24 0 0 0 chrX 162331652 162331676 -4318620 + AT_rich Low_complexity Low_complexity 1 24 0 3 1823 254 337 35 0 chrX 162333336 162333422 -4316874 + RSINE1 SINE B4 67 155 -10 3 1823 948 105 0 0 chrX 162333427 162333570 -4316726 + (GA)n Simple_repeat Simple_repeat 2 144 0 3 1823 721 292 41 53 chrX 162334279 162334691 -4315605 - Lx9 LINE L1 -13 7631 7225 3 1823 820 321 23 49 chrX 162334767 162335111 -4315185 - RLTR17 LTR ERVK -237 455 121 3 1823 285 227 105 0 chrX 162335116 162335221 -4315075 - L1M2 LINE L1 -1572 4574 4425 3 1823 237 286 0 0 chrX 162335212 162335268 -4315028 + Lx7 LINE L1 7258 7313 -383 3 1823 366 114 0 0 chrX 162335294 162335364 -4314932 + (GA)n Simple_repeat Simple_repeat 1 70 0 3 1823 386 277 47 54 chrX 162335493 162335830 -4314466 - L1M2 LINE L1 -1703 4440 4085 3 1823 909 258 35 5 chrX 162335830 162336033 -4314263 + B3 SINE B2 1 209 -7 3 1823 3076 60 8 2 chrX 162336401 162336799 -4313497 + MTB LTR MaLR 1 400 0 3 1823 252 0 0 0 chrX 162337075 162337103 -4313193 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1823 412 309 29 35 chrX 162337106 162337277 -4313019 - L1MD3 LINE L1 -1149 6846 6677 3 1823 22 35 0 0 chrX 162337579 162337608 -4312688 + AT_rich Low_complexity Low_complexity 1 29 0 3 1823 257 365 26 5 chrX 162338045 162338238 -4312058 - L1MD3 LINE L1 -1968 5914 5718 3 1823 214 281 29 0 chrX 162338599 162338673 -4311623 + MIRc SINE MIR 27 104 -164 3 1823 242 328 26 47 chrX 162338865 162338991 -4311305 + B1F2 SINE Alu 3 119 -28 3 1823 387 0 0 0 chrX 162339386 162339429 -4310867 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1823 198 0 0 0 chrX 162339429 162339450 -4310846 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 1823 1830 236 296 33 chrX 162339824 162340645 -4309651 - RMER1B Other Other -4 1062 26 3 1823 1729 49 4 13 chrX 162340846 162341074 -4309222 - L1Md_F2 LINE L1 0 6582 6357 3 1823 486 61 0 0 chrX 162341219 162341285 -4309011 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 1823 21 36 0 0 chrX 162341298 162341326 -4308970 + AT_rich Low_complexity Low_complexity 1 28 0 3 1823 187 371 50 20 chrX 162341331 162341430 -4308866 + MIRc SINE MIR 51 152 -116 3 1823 6128 80 1 1 chrX 162341441 162342255 -4308041 - L1Md_F2 LINE L1 -3 6579 5766 3 1823 10817 72 10 29 chrX 162342255 162343784 -4306512 + L1Md_F2 LINE L1 4296 5828 -328 3 1823 2358 206 77 4 chrX 162344213 162344744 -4305552 + Lx9 LINE L1 6826 7395 -249 3 1823 553 328 44 19 chrX 162344884 162345089 -4305207 + MLT1F2 LTR MaLR 24 233 -327 3 1823 30 0 0 0 chrX 162345360 162345390 -4304906 + AT_rich Low_complexity Low_complexity 1 30 0 3 1823 525 71 0 0 chrX 162345623 162345693 -4304603 + (TA)n Simple_repeat Simple_repeat 2 71 0 3 1823 4029 74 4 0 chrX 162345759 162346284 -4304012 - L1_Mus2 LINE L1 -1 6565 6039 3 1823 8770 145 5 4 chrX 162346305 162347714 -4302582 - Lx2 LINE L1 -1 6996 5587 3 1823 21 0 0 0 chrX 162347893 162347914 -4302382 + AT_rich Low_complexity Low_complexity 1 21 0 3 1823 477 0 0 0 chrX 162348069 162348122 -4302174 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1823 6668 120 26 6 chrX 162348228 162349279 -4301017 + Lx3A LINE L1 5906 6977 -4 3 1823 22 0 0 0 chrX 162349281 162349303 -4300993 + AT_rich Low_complexity Low_complexity 1 22 0 3 1823 525 44 0 0 chrX 162350214 162350282 -4300014 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 1823 520 347 53 60 chrX 162350313 162350595 -4299701 - B4 SINE B4 -11 281 2 3 1823 851 30 34 40 chrX 162350653 162350828 -4299468 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 3 1823 188 331 85 14 chrX 162351418 162351559 -4298737 + MIR SINE MIR 91 241 -21 3 1823 466 283 85 63 chrX 162351911 162352330 -4297966 + L1MA5 LINE L1 5846 6288 -12 3 1823 924 343 34 15 chrX 162352340 162352751 -4297545 + Lx8 LINE L1 6921 7339 -134 3 1823 2976 26 3 0 chrX 162353467 162353812 -4296484 - ORR1A0 LTR MaLR 0 346 1 3 1823 242 208 83 0 chrX 162354428 162354500 -4295796 - L1M2 LINE L1 -3321 2822 2745 3 1823 34 0 0 0 chrX 162354603 162354637 -4295659 + AT_rich Low_complexity Low_complexity 1 34 0 4 1823 258 32 0 0 chrX 162354845 162354876 -4295420 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1823 326 292 0 11 chrX 162355457 162355547 -4294749 + PB1D10 SINE Alu 27 115 -2 4 1823 5374 96 30 8 chrX 162355691 162357194 -4293102 - L1VL2 LINE L1 -1789 1826 290 4 1823 358 118 83 31 chrX 162357203 162357299 -4292997 - Lx9 LINE L1 -1 7643 7543 4 1823 325 173 308 0 chrX 162357303 162357407 -4292889 - Lx9 LINE L1 -185 7459 7324 4 1823 866 256 50 54 chrX 162357407 162357684 -4292612 + Lx9 LINE L1 7027 7302 -342 4 1823 286 169 15 0 chrX 162357731 162357796 -4292500 - Lx6 LINE L1 -9 7451 7386 4 1823 1454 247 77 5 chrX 162357852 162358243 -4292053 - MTC LTR MaLR -2 419 1 4 1823 235 213 141 41 chrX 162358914 162358987 -4291309 - B4 SINE B4 -12 280 207 4 1823 828 214 249 11 chrX 162359075 162359364 -4290932 + Lx5 LINE L1 6299 6669 -389 4 1823 11120 90 2 2 chrX 162359346 162360917 -4289379 + L1_Mm LINE L1 1818 3388 -2495 4 1823 586 73 0 12 chrX 162360917 162361000 -4289296 - ETnERV3-int LTR ERVK -2970 4611 4530 4 1823 478 187 9 36 chrX 162361026 162361137 -4289159 - MMETn-int LTR ERVK -2380 2464 2357 4 1823 6990 109 53 4 chrX 162361142 162362523 -4287773 - ETnERV3-int LTR ERVK -3135 4271 2735 4 1823 281 291 0 55 chrX 162362535 162362626 -4287670 - ETnERV3-int LTR ERVK -4867 2539 2454 4 1823 458 178 93 0 chrX 162362637 162362755 -4287541 - ETnERV3-int LTR ERVK -5557 1849 1721 4 1823 1099 203 105 102 chrX 162362755 162363270 -4287026 - ETnERV3-int LTR ERVK -4783 623 251 4 1823 272 147 66 107 chrX 162363384 162363506 -4286790 - IAPLTR3-int LTR ERVK -6631 950 834 4 1823 427 110 18 115 chrX 162363511 162363624 -4286672 - IAPLTR3-int LTR ERVK -5886 935 834 4 1823 493 209 17 34 chrX 162363624 162363743 -4286553 - IAPLTR3-int LTR ERVK -6704 117 1 4 1823 1768 102 11 26 chrX 162363743 162364016 -4286280 - IAPLTR4 LTR ERVK 0 345 77 4 1823 9368 69 2 1 chrX 162364016 162365257 -4285039 + L1_Mm LINE L1 4162 5403 -480 4 1823 3955 111 80 13 chrX 162365257 162365880 -4284416 + L1Md_F2 LINE L1 5904 6568 -14 4 1823 21 71 0 0 chrX 162365880 162365922 -4284374 + AT_rich Low_complexity Low_complexity 1 42 0 4 1823 258 361 109 55 chrX 162365973 162366392 -4283904 - MLT1H LTR MaLR -123 456 72 4 1823 276 100 0 0 chrX 162366591 162366631 -4283665 + (T)n Simple_repeat Simple_repeat 1 40 0 4 1823 1129 50 0 0 chrX 162366633 162366773 -4283523 - B1_Mus2 SINE Alu -7 140 1 4 1823 303 347 83 101 chrX 162366980 162367365 -4282931 + ORR1C1 LTR MaLR 1 378 0 4 1823 24 77 0 0 chrX 162368236 162368288 -4282008 + AT_rich Low_complexity Low_complexity 1 52 0 4 1823 216 97 0 0 chrX 162368344 162368375 -4281921 + (T)n Simple_repeat Simple_repeat 1 31 0 4 1823 1115 81 0 0 chrX 162368375 162368523 -4281773 - B1_Mus1 SINE Alu 0 148 1 4 1823 327 272 135 48 chrX 162368525 162368983 -4281313 + L1M5 LINE L1 5081 5576 -603 4 1823 331 330 79 70 chrX 162369278 162369561 -4280735 + B4A SINE B4 8 281 -11 4 1823 811 0 20 0 chrX 162370133 162370232 -4280064 + (TAGA)n Simple_repeat Simple_repeat 2 102 0 4 1823 423 205 34 8 chrX 162370232 162370350 -4279946 - Lx2B LINE L1 -17 6983 6863 4 1823 691 182 8 0 chrX 162370350 162370476 -4279820 + RLTR13C2 LTR ERVK 16 142 -666 4 1823 32010 101 16 1 chrX 162370480 162376576 -4273720 - L1Md_F2 LINE L1 0 6582 392 4 1823 3039 122 54 15 chrX 162376576 162377159 -4273137 - RLTR13D4 LTR ERVK -317 716 1 4 1823 1556 248 28 13 chrX 162377163 162377555 -4272741 - L1_Rod LINE L1 -6468 704 307 4 1823 354 343 60 26 chrX 162377531 162377878 -4272418 - L1_Rod LINE L1 -6754 418 60 4 1823 24 32 0 0 chrX 162378654 162378685 -4271611 + AT_rich Low_complexity Low_complexity 1 31 0 4 1823 247 185 0 0 chrX 162378724 162378778 -4271518 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1823 335 78 20 0 chrX 162378778 162378829 -4271467 + (GA)n Simple_repeat Simple_repeat 2 53 0 4 1823 477 0 0 0 chrX 162378961 162379014 -4271282 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 1823 1751 246 59 27 chrX 162379278 162379767 -4270529 - Lx2B LINE L1 0 7000 6496 4 1823 192 152 0 0 chrX 162379854 162379887 -4270409 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1823 967 280 123 18 chrX 162382053 162382547 -4267749 + L1MD3 LINE L1 7450 7995 0 4 1823 1113 89 0 0 chrX 162382560 162382706 -4267590 + B1_Mus1 SINE Alu 2 147 -1 4 1823 679 239 15 0 chrX 162382879 162383013 -4267283 - Lx7 LINE L1 -694 7002 6867 4 1823 1665 226 91 32 chrX 162383026 162383465 -4266831 + Lx7 LINE L1 7012 7476 -220 4 1823 1691 230 23 194 chrX 162383521 162384255 -4266041 + RMER19C LTR ERVK 3 611 0 4 1823 305 333 39 31 chrX 162384417 162384544 -4265752 + L1MEg LINE L1 209 336 -5748 4 1823 8676 115 12 14 chrX 162384579 162385911 -4264385 + Lx3A LINE L1 5670 6974 -7 4 1823 575 255 117 27 chrX 162385944 162386242 -4264054 + L1MEg LINE L1 500 824 -5260 4 1823 1136 71 7 0 chrX 162386278 162386433 -4263863 + L1_Mm LINE L1 4966 5121 -762 4 1823 4734 210 58 17 chrX 162386430 162387511 -4262785 + Lx5 LINE L1 5925 7050 0 4 1823 227 167 91 0 chrX 162388354 162388420 -4261876 + T-rich Low_complexity Low_complexity 2 73 0 4 1823 211 233 0 62 chrX 162388420 162388484 -4261812 - PB1D10 SINE Alu 0 117 58 4 1823 1897 254 78 49 chrX 162389375 162390738 -4259558 + RMER1B Other Other 1 1057 -9 4 1823 6356 137 12 6 chrX 162390818 162391145 -4259151 - Lx LINE L1 -8 6646 6316 4 1823 3372 33 5 0 chrX 162391145 162391539 -4258757 + MTA_Mm LTR MaLR 1 396 0 4 1823 7070 149 9 5 chrX 162391539 162393260 -4257036 - Lx LINE L1 -339 6315 4589 4 1823 760 263 22 22 chrX 162393382 162393611 -4256685 - Lx6 LINE L1 -8 7452 7224 4 1823 198 103 0 0 chrX 162393789 162393818 -4256478 + (TCTCCC)n Simple_repeat Simple_repeat 6 34 0 4 1823 2899 231 98 55 chrX 162393844 162395014 -4255282 - Lx9 LINE L1 -15 7629 6410 4 1823 333 0 0 0 chrX 162395039 162395076 -4255220 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 1823 520 53 26 0 chrX 162395089 162395165 -4255131 + (GA)n Simple_repeat Simple_repeat 2 79 0 4 1823 22 70 0 0 chrX 162395382 162395425 -4254871 + AT_rich Low_complexity Low_complexity 1 43 0 4 1823 2529 97 34 0 chrX 162396416 162396827 -4253469 - L1_Mur2 LINE L1 -2638 3239 2815 4 1823 484 262 23 23 chrX 162396829 162396958 -4253338 - RMER19B LTR ERVK -308 594 466 4 1823 542 110 0 0 chrX 162396958 162397040 -4253256 - L1_Mur2 LINE L1 -3069 2808 2727 4 1823 2602 126 87 12 chrX 162397030 162397617 -4252679 - L1_Mur2 LINE L1 -4480 1397 749 4 1823 3916 142 84 87 chrX 162397617 162398090 -4252206 + RMER17A2 LTR ERVK 1 534 -372 4 227 2136 27 113 11 chrX 162398090 162398355 -4251941 + RLTR10B LTR ERVK 1 292 0 4 1824 3916 142 84 87 chrX 162398355 162398790 -4251506 + RMER17A2 LTR ERVK 535 906 0 4 1824 410 241 0 0 chrX 162398790 162398906 -4251390 - L1_Mur2 LINE L1 -6487 599 484 4 1824 624 70 0 0 chrX 162399259 162399345 -4250951 + (TC)n Simple_repeat Simple_repeat 2 87 0 4 1824 252 0 0 0 chrX 162399345 162399372 -4250924 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1824 352 96 55 0 chrX 162399372 162399445 -4250851 + (CAGA)n Simple_repeat Simple_repeat 4 80 0 4 1824 279 139 0 0 chrX 162399540 162399583 -4250713 + B2_Mm2 SINE B2 9 51 -144 4 1824 888 116 23 17 chrX 162399880 162400055 -4250241 + GA-rich Low_complexity Low_complexity 5 180 0 4 1824 977 263 93 67 chrX 162400086 162400369 -4249927 - Lx7 LINE L1 -440 7256 6988 4 1824 450 0 0 0 chrX 162400369 162400419 -4249877 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1824 977 263 93 67 chrX 162400419 162400555 -4249741 - Lx7 LINE L1 -709 6987 6826 4 1824 440 290 113 30 chrX 162400567 162400930 -4249366 + L1MC5 LINE L1 7044 7436 -525 4 1824 627 289 143 70 chrX 162401009 162401281 -4249015 + B4 SINE B4 1 292 0 4 1824 194 302 0 36 chrX 162402400 162402455 -4247841 + L2c LINE L2 3297 3349 -38 4 1824 1172 265 111 18 chrX 162402585 162403199 -4247097 - L1ME2z LINE L1 -284 6160 5490 4 1824 3719 277 46 35 chrX 162403256 162404619 -4245677 - Lx8 LINE L1 0 7473 6095 4 1824 1079 236 11 7 chrX 162404757 162405026 -4245270 - L1_Rod LINE L1 -33 5814 5545 4 1824 967 260 103 43 chrX 162405024 162405368 -4244928 + L1_Mur3 LINE L1 4747 5126 -754 4 1824 2242 147 73 10 chrX 162405368 162405779 -4244517 - RLTR9B LTR ERVK 0 437 1 4 1824 967 260 103 43 chrX 162405779 162405940 -4244356 + L1_Mur3 LINE L1 5127 5282 -598 4 1824 321 353 34 34 chrX 162406019 162406198 -4244098 - L1MC LINE L1 -764 5382 5204 4 1824 1071 261 21 24 chrX 162406263 162406554 -4243742 + B4A SINE B4 1 290 -2 4 1824 250 178 0 0 chrX 162406690 162406735 -4243561 + B1_Mus1 SINE Alu 2 46 -102 4 1824 219 235 0 19 chrX 162406698 162406750 -4243546 + B4A SINE B4 94 144 -148 4 1824 298 299 8 17 chrX 162406794 162406913 -4243383 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 4 1824 2311 256 29 0 chrX 162406923 162407517 -4242779 + Lx9 LINE L1 6321 6931 -713 4 1824 1076 244 26 47 chrX 162407510 162407849 -4242447 + Lx9 LINE L1 6874 7205 -439 4 1824 2345 164 53 9 chrX 162407849 162408299 -4241997 - RLTR28 LTR ERVL -2 522 53 4 1824 710 267 20 43 chrX 162408315 162408620 -4241676 + Lx9 LINE L1 7198 7495 -149 4 1824 462 239 9 26 chrX 162408637 162408753 -4241543 + PB1D9 SINE Alu 2 115 -5 4 1824 424 105 26 0 chrX 162408754 162408830 -4241466 + (TAA)n Simple_repeat Simple_repeat 1 78 0 4 1824 24 32 0 0 chrX 162408915 162408946 -4241350 + AT_rich Low_complexity Low_complexity 1 31 0 4 1824 1210 164 82 0 chrX 162409864 162410083 -4240213 - Lx7 LINE L1 -13 7447 7211 4 1824 238 179 60 0 chrX 162410626 162410693 -4239603 - Lx6 LINE L1 0 7460 7390 4 1824 5439 193 69 65 chrX 162410687 162413142 -4237154 - Lx7 LINE L1 -764 6932 4451 4 1824 223 141 0 53 chrX 162413200 162413275 -4237021 + T-rich Low_complexity Low_complexity 3 73 0 4 1824 1521 203 74 6 chrX 162413372 162413684 -4236612 - ORR1D1 LTR MaLR 0 374 42 4 1824 562 409 83 22 chrX 162413901 162413939 -4236357 - LTR16C LTR ERVL -14 475 427 4 1824 1200 111 0 0 chrX 162413939 162414119 -4236177 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 1824 562 409 83 22 chrX 162414119 162414528 -4235768 - LTR16C LTR ERVL -63 426 2 4 1824 5210 121 68 14 chrX 162414846 162415703 -4234593 + RMER17A2 LTR ERVK 1 903 -3 4 1824 4527 122 61 4 chrX 162415840 162416599 -4233697 + L1VL2 LINE L1 122 923 -5412 4 1824 182 176 214 29 chrX 162416609 162416679 -4233617 - MIR SINE MIR -1 261 179 4 1824 1794 232 85 47 chrX 162416960 162417467 -4232829 + Lx7 LINE L1 6888 7413 -283 4 1824 262 141 114 34 chrX 162417545 162417633 -4232663 + Lx6 LINE L1 7362 7456 -4 4 1824 408 67 0 0 chrX 162417924 162417984 -4232312 + (A)n Simple_repeat Simple_repeat 1 60 0 4 1824 378 295 43 79 chrX 162418046 162418186 -4232110 - MER58A DNA MER1_type -84 140 6 5 1824 3463 229 44 12 chrX 162418360 162419186 -4231110 + Lx7 LINE L1 6381 7232 -464 5 1824 716 237 32 85 chrX 162419195 162419348 -4230948 + ORR1B2 LTR MaLR 6 154 -213 5 1824 930 19 0 0 chrX 162419348 162419456 -4230840 + (TCTCCC)n Simple_repeat Simple_repeat 6 113 0 5 1824 716 237 32 85 chrX 162419456 162419491 -4230805 + ORR1B2 LTR MaLR 155 184 -183 5 1824 26626 113 9 2 chrX 162419491 162424206 -4226090 - L1_Mus1 LINE L1 -273 6294 1546 5 1824 23503 65 147 3 chrX 162424199 162429511 -4220785 - L1Md_F2 LINE L1 -2 6583 338 5 1824 4641 164 74 8 chrX 162429524 162430599 -4219697 - L1_Mus1 LINE L1 -5380 1344 201 5 1824 257 262 110 18 chrX 162430632 162430741 -4219555 + Lx7 LINE L1 7559 7677 -19 4 1824 296 321 0 0 chrX 162431031 162431112 -4219184 + ID4_ SINE ID 1 81 -2 5 1824 658 315 16 16 chrX 162431624 162431808 -4218488 + ORR1E LTR MaLR 8 191 -168 5 1824 399 89 0 0 chrX 162431808 162431864 -4218432 + (TC)n Simple_repeat Simple_repeat 2 57 0 5 1824 594 269 13 52 chrX 162431864 162431908 -4218388 + ORR1E LTR MaLR 149 194 -176 5 1824 3455 53 0 5 chrX 162431908 162432342 -4217954 + L1Md_T LINE L1 6150 6581 -1 5 1824 594 269 13 52 chrX 162432342 162432528 -4217768 + ORR1E LTR MaLR 195 370 0 5 1824 22 70 0 0 chrX 162432635 162432678 -4217618 + AT_rich Low_complexity Low_complexity 1 43 0 5 1824 451 287 103 24 chrX 162433274 162433479 -4216817 - MIR SINE MIR -1 261 42 5 1824 650 292 0 0 chrX 162433997 162434134 -4216162 + ID_B1 SINE B4 82 218 -6 5 1824 534 255 19 70 chrX 162434134 162434153 -4216143 + B1F SINE Alu 1 148 -1 5 1824 220 313 145 0 chrX 162434645 162434728 -4215568 + L2a LINE L2 3316 3410 -16 5 1824 180 0 0 0 chrX 162434731 162434751 -4215545 + (AATTG)n Simple_repeat Simple_repeat 3 22 0 5 1824 858 251 92 10 chrX 162434846 162435219 -4215077 + L1M4 LINE L1 5262 5665 -514 5 1824 27 29 0 0 chrX 162435340 162435374 -4214922 + AT_rich Low_complexity Low_complexity 1 34 0 5 1824 303 242 128 8 chrX 162435385 162435510 -4214786 + L1MA4A LINE L1 5724 5863 -440 5 1824 1853 184 75 68 chrX 162435684 162436156 -4214140 + Lx7 LINE L1 7143 7605 -91 5 1824 189 0 0 0 chrX 162436156 162436177 -4214119 + (GGGGA)n Simple_repeat Simple_repeat 2 22 0 5 1824 1853 184 75 68 chrX 162436177 162436248 -4214048 + Lx7 LINE L1 7606 7689 -7 5 1824 231 155 103 0 chrX 162436266 162436324 -4213972 - ORR1A4 LTR MaLR -236 93 30 5 1824 1211 264 36 125 chrX 162437291 162437707 -4212589 - MTE2a LTR MaLR 0 379 1 5 1824 1621 283 111 27 chrX 162437716 162438239 -4212057 - MER21B LTR ERV1 -13 850 284 5 1824 1291 290 35 11 chrX 162438240 162438610 -4211686 - MTEa LTR MaLR 0 379 1 5 1824 531 0 0 0 chrX 162438645 162438704 -4211592 + (TC)n Simple_repeat Simple_repeat 1 59 0 5 1824 405 0 0 0 chrX 162438704 162438748 -4211548 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1824 315 0 0 0 chrX 162439181 162439216 -4211080 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1824 305 331 18 78 chrX 162439682 162439849 -4210447 - MIR SINE MIR -31 231 75 5 1824 1137 176 0 5 chrX 162439852 162440057 -4210239 + Lx7 LINE L1 7101 7304 -392 5 1824 432 0 0 0 chrX 162440115 162440163 -4210133 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1824 303 253 43 49 chrX 162440185 162440347 -4209949 + Lx7 LINE L1 7536 7696 0 5 1824 200 236 127 0 chrX 162440481 162440536 -4209760 - MIR SINE MIR -170 92 31 5 1824 244 302 234 16 chrX 162441164 162441292 -4209004 + MER5B DNA MER1_type 7 162 -16 5 1824 188 354 66 33 chrX 162441348 162441529 -4208767 - L2c LINE L2 -177 3210 3024 5 1824 270 0 0 0 chrX 162443634 162443664 -4206632 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 1824 309 51 0 0 chrX 162443664 162443702 -4206594 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1824 301 349 0 53 chrX 162444003 162444136 -4206160 + MLT1A1 LTR MaLR 1 126 -282 5 1824 315 0 0 0 chrX 162444204 162444239 -4206057 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 5 1824 3309 158 2 7 chrX 162444478 162445085 -4205211 - L1_Mur2 LINE L1 -717 5160 4557 5 1824 8785 118 14 1 chrX 162445084 162446448 -4203848 + Lx2A1 LINE L1 5625 7005 -3 5 1824 226 0 0 56 chrX 162446454 162446490 -4203806 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1824 555 210 126 0 chrX 162446526 162446645 -4203651 + B1_Mur4 SINE Alu 1 134 -16 5 1824 450 0 0 0 chrX 162446646 162446696 -4203600 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1824 240 300 17 0 chrX 162446721 162446781 -4203515 - MLT1H2 LTR MaLR -392 97 37 5 1824 757 142 0 11 chrX 162447219 162447489 -4202807 + (CATATA)n Simple_repeat Simple_repeat 1 267 0 5 1824 2402 201 21 1 chrX 162447830 162448356 -4201940 - Lx5 LINE L1 -17 7041 6477 5 1824 682 175 0 0 chrX 162448628 162448731 -4201565 + B1_Mur3 SINE Alu 1 103 -46 5 1824 827 76 17 0 chrX 162448782 162448901 -4201395 + (CATA)n Simple_repeat Simple_repeat 4 124 0 5 1824 366 179 122 31 chrX 162449171 162449269 -4201027 - PB1D10 SINE Alu -1 116 10 5 1824 297 338 24 77 chrX 162449310 162449480 -4200816 + MIRb SINE MIR 104 264 -4 5 1824 711 0 0 0 chrX 162449789 162449868 -4200428 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 5 1824 1596 277 25 37 chrX 162450219 162450782 -4199514 - Lx9 LINE L1 -267 7377 6822 5 1824 588 111 0 0 chrX 162450899 162450989 -4199307 + (TG)n Simple_repeat Simple_repeat 1 90 0 5 1824 17086 88 29 1 chrX 162451060 162454359 -4195937 + L1Md_F2 LINE L1 382 3774 -2109 5 1824 4719 52 0 0 chrX 162454356 162454969 -4195327 + L1Md_F2 LINE L1 4974 5586 -297 5 1824 7172 45 63 23 chrX 162454970 162455927 -4194369 + L1Md_F2 LINE L1 5588 6582 0 5 1824 214 250 50 50 chrX 162456033 162456113 -4194183 - MER5B DNA MER1_type -25 153 74 5 1824 221 167 0 18 chrX 162456289 162456344 -4193952 + CT-rich Low_complexity Low_complexity 1 54 0 5 1824 767 184 189 0 chrX 162456412 162456602 -4193694 + URR1A DNA MER1_type 1 226 0 5 1824 275 289 86 17 chrX 162456956 162457072 -4193224 + ORR1E LTR MaLR 1 124 -235 5 1824 1226 255 68 65 chrX 162458102 162458455 -4191841 + ORR1E LTR MaLR 6 359 0 5 1824 673 225 32 26 chrX 162458457 162458612 -4191684 + ORR1E-int LTR MaLR 1 156 -1424 5 1824 2424 255 89 5 chrX 162458610 162459169 -4191127 + ORR1E-int LTR MaLR 920 1527 -53 5 1824 1306 295 37 9 chrX 162459169 162459518 -4190778 + ORR1E LTR MaLR 1 359 0 5 1824 267 395 48 40 chrX 162460345 162460593 -4189703 + LTR16E1 LTR ERVL 219 468 -70 5 1824 190 369 48 0 chrX 162460785 162460888 -4189408 - L2c LINE L2 -228 3159 3052 5 1824 1550 231 83 56 chrX 162461004 162461472 -4188824 - RLTR28B LTR ERVL 0 481 1 5 1824 1278 212 114 18 chrX 162461477 162461818 -4188478 - ORR1D1 LTR MaLR 0 374 1 5 1824 201 324 29 0 chrX 162461863 162461931 -4188365 + L2a LINE L2 2550 2619 -800 5 1824 261 312 169 0 chrX 162462508 162462662 -4187634 + L2a LINE L2 2811 2990 -429 5 1824 244 220 174 11 chrX 162462662 162462754 -4187542 - MER3 DNA MER1_type -91 118 12 5 1824 1406 74 0 93 chrX 162462769 162463006 -4187290 - L1Md_F2 LINE L1 -1 6581 6367 5 1824 289 343 39 0 chrX 162463042 162463144 -4187152 + L2a LINE L2 3321 3426 0 5 1824 2878 106 112 2 chrX 162463364 162463866 -4186430 - Lx2B LINE L1 -265 6735 6179 5 1824 929 127 249 0 chrX 162464494 162464675 -4185621 + URR1A DNA MER1_type 1 226 0 5 1824 701 226 31 6 chrX 162465209 162465369 -4184927 + RSINE1 SINE B4 2 165 0 5 1824 600 59 0 0 chrX 162465588 162465673 -4184623 + (CA)n Simple_repeat Simple_repeat 1 85 0 5 1824 189 26 25 50 chrX 162465698 162465738 -4184558 + (TAAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1824 188 401 6 18 chrX 162465821 162465986 -4184310 - L3b LINE CR1 -100 382 220 5 1824 225 242 15 0 chrX 162466242 162466308 -4183988 - RMER1C Other Other -16 1326 1260 5 1824 288 226 0 0 chrX 162466363 162466416 -4183880 + ID_B1 SINE B4 165 217 -7 5 1824 22 0 0 0 chrX 162466531 162466553 -4183743 + AT_rich Low_complexity Low_complexity 1 22 0 5 1824 231 325 38 17 chrX 162467446 162467578 -4182718 + MIRc SINE MIR 19 157 -111 5 1824 1186 316 80 25 chrX 162467611 162468088 -4182208 - LTR40a LTR ERVL -11 508 6 5 1824 271 272 21 42 chrX 162468090 162468186 -4182110 + MIRb SINE MIR 175 268 0 5 1824 472 294 25 44 chrX 162468603 162468763 -4181533 + MLT1J1 LTR MaLR 1 157 -287 5 1824 22 80 0 0 chrX 162468981 162469031 -4181265 + AT_rich Low_complexity Low_complexity 1 50 0 5 1824 2005 172 13 64 chrX 162469430 162469822 -4180474 - ORR1C1 LTR MaLR -3 375 4 5 1824 560 235 138 15 chrX 162469884 162470087 -4180209 - Lx LINE L1 -279 7194 6967 5 1824 228 296 164 7 chrX 162470092 162470238 -4180058 + Lx8 LINE L1 7294 7462 -11 5 1824 642 161 114 24 chrX 162470286 162470401 -4179895 - Lx LINE L1 -5 6649 6536 5 1824 216 0 0 0 chrX 162470401 162470425 -4179871 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 5 1824 642 161 114 24 chrX 162470425 162470475 -4179821 - Lx LINE L1 -119 6535 6471 5 1824 5901 91 19 11 chrX 162470476 162472114 -4178182 - L1VL2 LINE L1 -1898 1717 66 5 1824 199 303 207 21 chrX 162472278 162472423 -4177873 + MIRb SINE MIR 56 227 -41 5 1824 245 336 62 54 chrX 162472487 162472616 -4177680 + MLT1I LTR MaLR 54 183 -228 5 1824 704 346 77 42 chrX 162472970 162473347 -4176949 - MamRep137 DNA TcMar? -49 395 6 5 1824 1904 147 31 29 chrX 162473629 162474110 -4176186 + RLTR13C1 LTR ERVK 271 764 -350 5 1824 616 321 18 48 chrX 162474287 162474516 -4175780 - RMER15 LTR ERVL 0 575 354 5 1824 1090 209 9 24 chrX 162475116 162475327 -4174969 + B3 SINE B2 9 216 0 5 1824 1047 261 0 18 chrX 162475481 162475700 -4174596 - B3 SINE B2 0 216 2 5 1824 461 264 53 65 chrX 162476039 162476209 -4174087 + MER106B DNA MER1_type 892 1059 0 5 1824 795 312 9 40 chrX 162476662 162476889 -4173407 + ID_B1 SINE B4 4 223 -1 5 1824 270 344 33 0 chrX 162478457 162478547 -4171749 - MER58B DNA MER1_type -1 340 248 5 1824 1618 292 65 33 chrX 162478618 162478663 -4171633 + Lx8 LINE L1 6385 6435 -1038 5 1824 651 60 0 0 chrX 162478663 162478747 -4171549 + (GAAAA)n Simple_repeat Simple_repeat 2 85 0 5 1824 1618 292 65 33 chrX 162478747 162479281 -4171015 + Lx8 LINE L1 6436 6982 -491 5 1824 6241 54 7 21 chrX 162479294 162480111 -4170185 + L1Md_F2 LINE L1 5776 6581 -1 5 1824 376 255 28 0 chrX 162480115 162480221 -4170075 + L1M1 LINE L1 5496 5604 -696 5 1824 771 239 72 5 chrX 162480283 162480476 -4169820 + B3 SINE B2 2 207 -9 5 1824 240 271 17 0 chrX 162480567 162480626 -4169670 + B4A SINE B4 85 144 -148 5 1824 351 240 47 19 chrX 162480576 162480682 -4169614 + PB1D10 SINE Alu 9 117 0 6 1824 1651 276 52 17 chrX 162480945 162481462 -4168834 + Lx8 LINE L1 6918 7452 -21 6 1824 202 103 67 33 chrX 162481466 162481526 -4168770 + (TATG)n Simple_repeat Simple_repeat 1 62 0 6 1824 31 0 0 0 chrX 162481783 162481814 -4168482 + AT_rich Low_complexity Low_complexity 1 31 0 6 1824 529 181 25 0 chrX 162482149 162482256 -4168040 + MTEb LTR MaLR 1 117 -262 6 1824 986 252 109 8 chrX 162482684 162482932 -4167364 + MTEb LTR MaLR 103 375 -4 6 1824 5210 282 76 21 chrX 162482937 162483016 -4167280 + MTEb-int LTR MaLR 1 67 -1513 6 1824 4846 42 15 13 chrX 162483016 162483624 -4166672 + L1Md_F2 LINE L1 5974 6582 0 6 1824 5210 282 76 21 chrX 162483624 162485038 -4165258 + MTEb-int LTR MaLR 68 1576 -4 6 1824 272 149 0 0 chrX 162485084 162485131 -4165165 + MTEb LTR MaLR 333 379 0 6 1824 1892 131 43 106 chrX 162485538 162485955 -4164341 + ORR1B1 LTR MaLR 2 392 -2 6 1824 942 284 144 20 chrX 162487151 162487506 -4162790 + MLT1A1 LTR MaLR 7 405 -3 6 1824 255 373 38 33 chrX 162487589 162487772 -4162524 + L4 LINE RTE 1374 1557 -472 6 1824 471 18 0 0 chrX 162488014 162488070 -4162226 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 1824 342 308 113 53 chrX 162488091 162488242 -4162054 - RSINE1 SINE B4 -2 163 4 6 1824 238 300 143 11 chrX 162489531 162489622 -4160674 - MER5A DNA MER1_type -83 106 4 6 1824 332 164 14 0 chrX 162490333 162490406 -4159890 + Lx7 LINE L1 7603 7676 -20 6 1824 1248 47 0 0 chrX 162490431 162490579 -4159717 + B1_Mus1 SINE Alu 1 148 0 6 1824 185 132 26 0 chrX 162490579 162490617 -4159679 + A-rich Low_complexity Low_complexity 1 39 0 6 1824 546 16 0 0 chrX 162491288 162491351 -4158945 + (TC)n Simple_repeat Simple_repeat 1 63 0 6 1824 1100 311 115 29 chrX 162491472 162491959 -4158337 + MLT1F2 LTR MaLR 24 552 -8 6 1824 1094 251 24 30 chrX 162492426 162492755 -4157541 + RLTR15 LTR ERVK 3 329 -30 6 1824 210 71 0 0 chrX 162493781 162493809 -4156487 + (CAGAGA)n Simple_repeat Simple_repeat 2 29 0 6 1824 1621 31 5 0 chrX 162493809 162494000 -4156296 + B2_Mm1t SINE B2 2 193 0 6 1824 5393 132 15 1 chrX 162494195 162495108 -4155188 - L1_Mm LINE L1 -551 5332 4407 6 1824 2526 129 224 6 chrX 162495107 162495620 -4154676 + L1_Mus3 LINE L1 6014 6638 0 6 1824 409 277 46 8 chrX 162495654 162495785 -4154511 + B1F SINE Alu 3 138 -11 6 1824 223 196 18 0 chrX 162495786 162495842 -4154454 + A-rich Low_complexity Low_complexity 6 62 0 6 1824 423 291 9 18 chrX 162496633 162496745 -4153551 - PB1D10 SINE Alu -5 112 2 6 1824 252 355 9 18 chrX 162496650 162496759 -4153537 - ID_B1 SINE B4 -48 176 69 6 1824 673 259 24 68 chrX 162496845 162497094 -4153202 + RLTR20D LTR ERVK 1 238 -330 6 1824 1677 10 0 0 chrX 162497129 162497322 -4152974 + L1Md_F2 LINE L1 6377 6569 -13 6 1824 457 308 0 30 chrX 162497334 162497468 -4152828 + RLTR20D LTR ERVK 433 562 -16 6 1824 600 276 140 5 chrX 162497793 162498161 -4152135 - L1M2 LINE L1 -386 5785 5333 6 1824 412 300 0 0 chrX 162498155 162498265 -4152031 + L1M2 LINE L1 4861 4970 -1173 6 1824 574 219 19 0 chrX 162498381 162498486 -4151810 + PB1D9 SINE Alu 7 113 -7 6 1824 608 270 52 45 chrX 162498589 162498931 -4151365 + L1M2 LINE L1 5265 5611 -689 6 1824 483 33 0 0 chrX 162499431 162499492 -4150804 + (TATG)n Simple_repeat Simple_repeat 2 62 0 6 1824 2252 117 3 12 chrX 162500375 162500703 -4149593 - ORR1A2 LTR MaLR 0 327 3 1 1824 35149 31 2 8 chrX 162500875 162506138 -4144158 + L1Md_T LINE L1 361 5586 -297 2 1824 8342 40 0 0 chrX 162506138 162507134 -4143162 + L1Md_T LINE L1 5587 6582 0 2 1824 1165 256 21 70 chrX 162507203 162507576 -4142720 + ORR1E LTR MaLR 5 359 0 3 1824 24 0 0 0 chrX 162508375 162508399 -4141897 + AT_rich Low_complexity Low_complexity 1 24 0 4 1824 28 48 0 0 chrX 162508430 162508472 -4141824 + AT_rich Low_complexity Low_complexity 1 42 0 5 1824 5769 72 0 8 chrX 162508787 162509539 -4140757 - L1_Mus1 LINE L1 -1 6566 5821 6 1824 2416 92 0 0 chrX 162509540 162509875 -4140421 + L1_Mus1 LINE L1 5473 5807 -76 6 1824 296 161 0 101 chrX 162510222 162510291 -4140005 - URR1B DNA MER1_type 0 225 164 7 1824 579 258 8 0 chrX 162510279 162510399 -4139897 - B4A SINE B4 -171 121 1 8 1824 1377 267 18 68 chrX 162510494 162510888 -4139408 + MTEa LTR MaLR 6 379 0 9 1824 269 281 52 15 chrX 162511454 162511566 -4138730 - MLT1J1 LTR MaLR -293 155 43 1 1824 1146 291 95 46 chrX 162512001 162513202 -4137094 + L1MA4 LINE L1 4477 5674 -173 1 1824 545 302 141 12 chrX 162513434 162513682 -4136614 + RMER15 LTR ERVL 296 575 0 1 1824 509 221 69 0 chrX 162513687 162513818 -4136478 + L1MA4 LINE L1 5789 5928 -372 1 1824 467 231 0 0 chrX 162513818 162513925 -4136371 + MTEb LTR MaLR 1 107 -272 1 1824 909 245 15 0 chrX 162515558 162515758 -4134538 + B3 SINE B2 3 205 -11 1 1824 378 314 24 54 chrX 162515776 162515944 -4134352 + RSINE1 SINE B4 3 165 0 1 1824 31 0 0 0 chrX 162515966 162515997 -4134299 + AT_rich Low_complexity Low_complexity 1 31 0 1 1824 588 121 0 0 chrX 162516013 162516104 -4134192 + (TA)n Simple_repeat Simple_repeat 1 91 0 1 1824 216 0 0 0 chrX 162516275 162516299 -4133997 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1 1824 482 268 116 27 chrX 162516303 162516449 -4133847 - B3 SINE B2 -57 159 1 1 1824 1590 160 17 27 chrX 162518235 162518531 -4131765 - Lx3A LINE L1 -5 6976 6684 2 1824 4464 56 5 0 chrX 162518629 162519186 -4131110 - L1Md_F2 LINE L1 -12 6570 6011 2 1824 29910 83 5 5 chrX 162519186 162524178 -4126118 - L1Md_F2 LINE L1 -499 5384 396 2 1824 384 289 100 30 chrX 162524364 162524664 -4125632 + L1ME2 LINE L1 4497 4817 -1329 2 1824 441 271 69 15 chrX 162524720 162524851 -4125445 - B1F2 SINE Alu -11 138 1 2 1824 817 280 116 20 chrX 162524945 162525237 -4125059 + MLT1A0 LTR MaLR 5 324 -41 2 1824 866 170 14 0 chrX 162525260 162525401 -4124895 + B1_Mur4 SINE Alu 2 144 -6 2 1824 537 16 0 0 chrX 162525431 162525493 -4124803 + (GA)n Simple_repeat Simple_repeat 2 63 0 2 1824 21 0 0 0 chrX 162525496 162525517 -4124779 + AT_rich Low_complexity Low_complexity 1 21 0 2 1824 284 273 45 0 chrX 162525523 162525589 -4124707 + RSINE1 SINE B4 2 70 -95 2 1824 309 151 0 0 chrX 162525773 162525826 -4124470 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1824 405 285 201 23 chrX 162525875 162526184 -4124112 + L1ME2 LINE L1 4978 5341 -805 2 1824 34 72 0 0 chrX 162526272 162526341 -4123955 + AT_rich Low_complexity Low_complexity 1 69 0 3 1824 694 301 97 34 chrX 162526402 162526938 -4123358 + L1ME2 LINE L1 5587 6156 -8 2 1824 487 263 0 0 chrX 162527839 162527934 -4122362 + RSINE1 SINE B4 3 97 -68 3 1824 555 90 0 0 chrX 162527940 162528018 -4122278 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 1824 355 247 0 0 chrX 162529119 162529200 -4121096 - LTR86C LTR ERVL -323 298 218 3 1824 225 0 0 0 chrX 162529225 162529250 -4121046 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1825 2824 208 9 15 chrX 162529570 162530226 -4120070 + L1VL4 LINE L1 173 824 -5478 3 1825 4414 54 55 0 chrX 162530220 162530815 -4119481 + L1Md_F2 LINE L1 5702 6329 -253 3 1825 487 61 73 0 chrX 162530818 162530900 -4119396 + L1Md_F2 LINE L1 6495 6582 0 3 1825 260 279 25 25 chrX 162530912 162530993 -4119303 + RMER1B Other Other 309 389 -677 3 1825 4521 274 42 22 chrX 162531004 162531437 -4118859 + RMER1A Other Other 23 409 -621 3 1825 1946 168 3 3 chrX 162531437 162531748 -4118548 - RLTR10E LTR ERVK 0 311 1 3 1825 4521 208 65 5 chrX 162531748 162532499 -4117797 + RMER1A Other Other 247 1020 -10 3 1825 299 312 0 24 chrX 162532737 162532806 -4117490 - RSINE1 SINE B4 -3 162 94 4 1825 1349 119 19 34 chrX 162532806 162533068 -4117228 - Lx LINE L1 -4 6650 6393 4 1825 299 312 0 24 chrX 162533068 162533080 -4117216 - RSINE1 SINE B4 -72 93 83 4 1825 606 252 15 0 chrX 162533451 162533582 -4116714 - ETnERV2-int LTR ERVK -204 7202 7070 4 1825 5611 105 0 7 chrX 162533583 162534355 -4115941 - Lx LINE L1 -255 6399 5633 4 1825 3490 25 0 0 chrX 162534355 162534751 -4115545 + MTA_Mm LTR MaLR 1 396 0 4 1825 5611 162 29 22 chrX 162534751 162535520 -4114776 - Lx LINE L1 -251 5632 4850 4 1825 498 33 0 0 chrX 162535641 162535701 -4114595 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1825 473 315 7 26 chrX 162535702 162535855 -4114441 - RSINE1 SINE B4 -12 153 4 4 1825 1066 304 110 18 chrX 162536017 162536409 -4113887 - MLT1C LTR MaLR -6 461 34 4 1825 274 243 14 0 chrX 162536425 162536506 -4113790 - MLT1C-int LTR MaLR 0 1371 1300 4 1825 594 0 0 0 chrX 162536796 162536862 -4113434 + (TC)n Simple_repeat Simple_repeat 1 66 0 4 1825 378 0 0 0 chrX 162536863 162536905 -4113391 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1825 812 291 14 0 chrX 162537630 162537850 -4112446 + ID_B1 SINE B4 2 224 0 5 1825 662 0 13 0 chrX 162538296 162538374 -4111922 + (TAAAA)n Simple_repeat Simple_repeat 2 80 0 5 1825 242 256 47 47 chrX 162538374 162538460 -4111836 - MER103 DNA DNA -17 149 64 5 1825 474 119 0 0 chrX 162538463 162538547 -4111749 + (TG)n Simple_repeat Simple_repeat 1 84 0 5 1825 237 258 0 154 chrX 162538555 162538633 -4111663 - B4A SINE B4 -14 278 213 5 1825 949 302 33 54 chrX 162538640 162539032 -4111264 - Lx6 LINE L1 -26 7434 7051 5 1825 228 154 0 0 chrX 162539033 162539072 -4111224 + Lx6 LINE L1 6688 6726 -734 5 1825 726 172 0 0 chrX 162539140 162539274 -4111022 - L1_Mm LINE L1 -1239 4644 4511 5 1825 8235 90 3 7 chrX 162539272 162541278 -4109018 - L1_Mus1 LINE L1 0 6567 4572 5 1825 6587 108 1 7 chrX 162541301 162542369 -4107927 - MusHAL1 LINE L1 -1130 1582 521 5 1825 720 204 0 20 chrX 162542365 162542515 -4107781 - L1VL2 LINE L1 -6084 251 105 6 1825 256 179 45 0 chrX 162542532 162542599 -4107697 - Lx7 LINE L1 -17 7679 7610 6 1825 736 11 21 0 chrX 162542613 162542706 -4107590 + (TC)n Simple_repeat Simple_repeat 1 95 0 6 1825 383 181 0 0 chrX 162542819 162542902 -4107394 + (TCTCTG)n Simple_repeat Simple_repeat 4 86 0 6 1825 1293 201 110 52 chrX 162542913 162543296 -4107000 - Lx7 LINE L1 -398 7298 6894 6 1825 264 240 25 77 chrX 162544559 162544685 -4105611 + MLT1A1 LTR MaLR 276 378 -30 6 1825 559 312 51 11 chrX 162544717 162544892 -4105404 + MER58A DNA MER1_type 40 221 -3 6 1825 622 310 0 0 chrX 162546055 162546197 -4104099 + ID_B1 SINE B4 81 222 -2 6 1825 550 182 103 0 chrX 162546200 162546365 -4103931 + L1M4 LINE L1 5264 5445 -739 6 1825 3417 57 9 0 chrX 162546416 162546869 -4103427 - L1_Mus1 LINE L1 -508 6059 5603 6 1825 3607 46 0 0 chrX 162546869 162547300 -4102996 + L1_Mus1 LINE L1 6135 6565 -2 6 1825 667 303 35 12 chrX 162547319 162547576 -4102720 + L1MB5 LINE L1 5912 6174 0 6 1825 322 180 16 47 chrX 162547820 162547884 -4102412 + HAL1-3A_ME LINE L1 1966 2027 -831 7 1825 492 18 0 0 chrX 162547927 162547984 -4102312 + (GA)n Simple_repeat Simple_repeat 2 58 0 7 1825 230 294 65 46 chrX 162548010 162548163 -4102133 - MIR SINE MIR -101 161 6 7 1825 1098 264 43 7 chrX 162548781 162549060 -4101236 - B4A SINE B4 -2 290 2 7 1825 954 148 108 0 chrX 162549424 162549600 -4100696 + MTC LTR MaLR 1 195 -226 7 1825 756 33 0 0 chrX 162550147 162550238 -4100058 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 7 1825 371 273 73 16 chrX 162550308 162550431 -4099865 + Charlie5 DNA MER1_type 5 134 -2490 7 1825 419 298 60 27 chrX 162550442 162550625 -4099671 + Charlie5 DNA MER1_type 2268 2456 -168 7 1825 733 156 94 0 chrX 162550626 162550754 -4099542 - B1_Mur1 SINE Alu -8 141 2 7 1825 25 75 0 0 chrX 162552117 162552170 -4098126 + AT_rich Low_complexity Low_complexity 1 53 0 7 1825 337 230 10 94 chrX 162552212 162552308 -4097988 - RSINE1 SINE B4 -75 90 3 7 1825 822 307 4 55 chrX 162552359 162552597 -4097699 + B4A SINE B4 63 288 -4 8 1825 356 97 16 0 chrX 162552620 162552682 -4097614 + (CA)n Simple_repeat Simple_repeat 2 64 0 8 1825 299 229 96 0 chrX 162553263 162553346 -4096950 + LTR16C LTR ERVL 364 454 -35 8 1825 783 261 41 36 chrX 162553363 162553582 -4096714 + ID_B1 SINE B4 3 222 -2 8 1825 1700 34 0 0 chrX 162555235 162555444 -4094852 + L1Md_F2 LINE L1 5378 5586 -297 8 1825 8121 42 1 5 chrX 162555444 162556432 -4093864 + L1Md_F2 LINE L1 5587 6570 -12 8 1825 367 268 27 40 chrX 162556440 162556588 -4093708 + L1MA7 LINE L1 6126 6271 -20 8 1825 2720 117 9 45 chrX 162557298 162557744 -4092552 - L1_Mus2 LINE L1 0 6566 6137 8 1825 3111 81 21 2 chrX 162557736 162558159 -4092137 + L1_Mus1 LINE L1 6137 6567 0 8 1825 9116 97 5 1 chrX 162558180 162559876 -4090420 - L1_Mus2 LINE L1 -422 6144 4445 8 1825 243 24 0 0 chrX 162559897 162559938 -4090358 - L1_Mus1 LINE L1 -1 6566 6526 8 1825 17766 41 4 0 chrX 162559941 162562225 -4088071 + L1Md_F2 LINE L1 3294 5586 -297 8 1825 7740 61 1 5 chrX 162562225 162563224 -4087072 + L1Md_F2 LINE L1 5587 6581 -1 8 1825 657 184 0 0 chrX 162563227 162563352 -4086944 - L1_Mus2 LINE L1 -46 6520 6396 9 1825 9141 124 4 10 chrX 162563350 162564917 -4085379 - L1_Mus2 LINE L1 -1428 4455 2898 8 1825 2270 65 143 12 chrX 162564919 162565262 -4085034 - RLTR10 LTR ERVK -2 388 1 9 1825 8408 19 0 0 chrX 162565264 162566259 -4084037 - RLTR10-int LTR ERVK -3 1984 990 9 1825 283 248 62 39 chrX 162566341 162566471 -4083825 - RLTR10-int LTR ERVK -5987 1594 1462 9 1825 4149 44 0 3 chrX 162566535 162567161 -4083135 - RLTR10-int LTR ERVK -989 998 302 9 1825 2343 72 119 11 chrX 162567161 162567513 -4082783 - RLTR10 LTR ERVK 0 390 1 9 1825 5727 112 12 1 chrX 162567513 162568430 -4081866 - L1Md_F LINE L1 -2980 2903 1977 9 1825 2067 205 70 37 chrX 162568430 162569077 -4081219 - L1Md_F LINE L1 -5569 1047 380 9 1825 454 200 12 0 chrX 162569317 162569402 -4080894 + L1_Mur3 LINE L1 504 589 -7123 9 1825 1725 140 166 21 chrX 162569432 162569818 -4080478 + L1_Mur3 LINE L1 789 1230 -6482 9 1825 300 324 52 87 chrX 162569818 162569845 -4080451 + B4 SINE B4 69 91 -201 9 1825 596 226 11 166 chrX 162569845 162570020 -4080276 + B1_Mur3 SINE Alu 2 149 0 9 1825 402 74 0 0 chrX 162570020 162570074 -4080222 + (GGAA)n Simple_repeat Simple_repeat 2 55 0 9 1825 823 116 67 0 chrX 162570077 162570241 -4080055 + Lx6 LINE L1 1258 1432 -4448 9 1825 7252 77 4 14 chrX 162570235 162571843 -4078453 + L1_Mus2 LINE L1 4973 6566 0 9 1825 7568 179 43 31 chrX 162571848 162574745 -4075551 + Lx6 LINE L1 4353 7291 -169 9 1825 440 278 23 0 chrX 162574806 162574939 -4075357 + Lx7 LINE L1 7197 7332 -364 1 1825 342 0 0 0 chrX 162574941 162574979 -4075317 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1825 295 60 20 20 chrX 162575079 162575130 -4075166 + (TTTTG)n Simple_repeat Simple_repeat 1 51 0 1 1825 37 39 0 0 chrX 162575195 162575246 -4075050 + AT_rich Low_complexity Low_complexity 1 51 0 1 1825 180 0 0 0 chrX 162575705 162575725 -4074571 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1825 642 166 25 5 chrX 162576107 162576225 -4074071 + ORR1A2 LTR MaLR 5 137 -241 1 1825 474 223 0 61 chrX 162576242 162576506 -4073790 + A-rich Low_complexity Low_complexity 1 248 0 1 1825 554 270 6 0 chrX 162576506 162576684 -4073612 + GA-rich Low_complexity Low_complexity 2 180 0 1 1825 763 68 256 0 chrX 162576687 162576804 -4073492 + B1_Mus1 SINE Alu 1 147 -1 1 1825 1660 94 4 4 chrX 162576809 162577043 -4073253 + ORR1A2 LTR MaLR 94 327 0 1 1825 258 295 46 20 chrX 162577559 162577711 -4072585 - L1MEf LINE L1 -1428 4891 4736 1 1825 379 312 0 9 chrX 162578110 162578223 -4072073 + PB1D10 SINE Alu 1 112 -5 1 1825 235 250 0 230 chrX 162578267 162578289 -4072007 - PB1D10 SINE Alu -5 112 92 1 1825 189 0 0 0 chrX 162578289 162578310 -4071986 + (TTG)n Simple_repeat Simple_repeat 2 22 0 1 1825 362 298 57 9 chrX 162578317 162578422 -4071874 - ID_B1 SINE B4 -25 199 90 1 1825 2552 135 0 87 chrX 162578485 162578673 -4071623 + L1_Mur2 LINE L1 4340 4519 -1358 1 1825 1092 91 0 0 chrX 162578673 162578816 -4071480 + B1_Mus1 SINE Alu 1 143 -5 1 1825 2552 135 0 87 chrX 162578816 162578957 -4071339 + L1_Mur2 LINE L1 4520 4635 -1242 1 1825 3477 20 2 0 chrX 162578957 162579352 -4070944 + MTA_Mm LTR MaLR 1 396 0 1 1825 2552 135 0 87 chrX 162579352 162579548 -4070748 + L1_Mur2 LINE L1 4636 4820 -1057 1 1825 263 306 0 89 chrX 162579826 162579905 -4070391 + MT2B2 LTR ERVL 167 238 -346 1 1825 433 327 85 15 chrX 162579942 162580212 -4070084 + B4A SINE B4 2 290 -2 1 1825 462 333 37 20 chrX 162580390 162580881 -4069415 - L1MEf LINE L1 -4928 1487 989 1 1825 326 253 11 75 chrX 162580980 162581074 -4069222 - RSINE1 SINE B4 0 165 78 1 1825 358 310 0 11 chrX 162581190 162581278 -4069018 - B4 SINE B4 -201 91 5 1 1825 319 346 41 27 chrX 162581281 162581501 -4068795 - L1MEf LINE L1 -5548 852 630 1 1825 528 16 0 0 chrX 162581575 162581636 -4068660 + (TC)n Simple_repeat Simple_repeat 2 62 0 1 1825 321 352 127 5 chrX 162581805 162582025 -4068271 - L1MEf LINE L1 -5719 590 344 1 1825 964 276 56 59 chrX 162582025 162582345 -4067951 + ORR1E LTR MaLR 1 319 -40 1 1825 2025 151 56 78 chrX 162582353 162582749 -4067547 + ORR1B1 LTR MaLR 8 394 0 1 1825 189 302 81 11 chrX 162584860 162584947 -4065349 - L4 LINE RTE -1310 719 627 1 1825 221 247 85 12 chrX 162585082 162585164 -4065132 - MIRb SINE MIR -42 226 139 1 1825 245 296 22 22 chrX 162585224 162585314 -4064982 - LTR85a LTR Gypsy? -98 604 515 1 1825 305 57 55 41 chrX 162585734 162585807 -4064489 + T-rich Low_complexity Low_complexity 2 75 0 1 1825 684 301 70 19 chrX 162586075 162586288 -4064008 - ID_B1 SINE B4 0 224 1 1 1825 315 146 0 0 chrX 162586582 162586637 -4063659 + (GGGA)n Simple_repeat Simple_repeat 2 56 0 1 1825 812 298 30 5 chrX 162587746 162587945 -4062351 + B4 SINE B4 2 205 -87 1 1825 243 0 0 0 chrX 162587955 162587982 -4062314 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 1 1825 308 263 126 0 chrX 162588101 162588196 -4062100 + ID_B1 SINE B4 118 224 0 1 1825 517 309 5 25 chrX 162588455 162588654 -4061642 + B3A SINE B2 2 196 -2 1 1825 261 340 0 7 chrX 162588742 162588890 -4061406 + L1M5 LINE L1 5714 5860 -264 1 1825 966 268 92 21 chrX 162588877 162589376 -4060920 + L1MB5 LINE L1 5381 5911 -267 1 1825 689 270 50 87 chrX 162589440 162589659 -4060637 + B3A SINE B2 6 216 0 1 1825 394 258 48 54 chrX 162589674 162589842 -4060454 + L1MB5 LINE L1 5999 6165 -13 1 1825 261 0 0 0 chrX 162590055 162590084 -4060212 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1 1825 189 0 0 0 chrX 162590085 162590106 -4060190 + (TGG)n Simple_repeat Simple_repeat 3 23 0 1 1825 924 130 30 12 chrX 162590116 162590280 -4060016 - Lx9 LINE L1 -179 7465 7299 1 1825 268 299 0 0 chrX 162590591 162590678 -4059618 + L1M4 LINE L1 5587 5673 -501 1 1825 246 331 94 18 chrX 162590702 162590893 -4059403 - MIRb SINE MIR -43 225 15 1 1825 333 305 125 17 chrX 162590917 162591037 -4059259 - MER20 DNA MER1_type -80 139 7 1 1825 342 383 7 7 chrX 162591363 162591505 -4058791 - MER5B DNA MER1_type 0 178 37 1 1825 937 274 171 7 chrX 162591496 162591805 -4058491 - RMER19C LTR ERVK -251 360 1 1 1825 181 83 56 0 chrX 162592048 162592084 -4058212 + (TCTCCC)n Simple_repeat Simple_repeat 5 42 0 1 1825 468 72 0 0 chrX 162592084 162592153 -4058143 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 1825 358 244 11 22 chrX 162592192 162592284 -4058012 - B4A SINE B4 -201 91 1 1 1825 674 291 39 5 chrX 162592375 162592582 -4057714 - ID_B1 SINE B4 -10 214 1 1 1825 272 360 104 76 chrX 162592860 162593555 -4056741 + Tigger15a DNA TcMar 1 714 -1 1 1825 21 0 0 0 chrX 162593828 162593849 -4056447 + AT_rich Low_complexity Low_complexity 1 21 0 1 1825 29036 103 14 3 chrX 162594411 162600335 -4049961 + L1_Mus1 LINE L1 577 6567 0 1 1825 2078 167 42 42 chrX 162600935 162601335 -4048961 - MTD LTR MaLR -3 416 17 1 1825 1468 84 38 0 chrX 162601452 162601665 -4048631 + L1_Mus3 LINE L1 6417 6637 -1 1 1825 770 188 14 14 chrX 162601774 162601914 -4048382 + B1_Mur2 SINE Alu 10 149 0 1 1825 1024 259 92 77 chrX 162602442 162602524 -4047772 + MT2B LTR ERVL 1 143 -458 1 1825 1005 77 102 6 chrX 162602524 162602681 -4047615 - B2_Mm2 SINE B2 -3 192 21 1 1825 1024 259 92 77 chrX 162602681 162602933 -4047363 + MT2B LTR ERVL 144 590 -11 1 1825 479 289 22 0 chrX 162603114 162603249 -4047047 + MER20 DNA MER1_type 82 219 0 1 1825 284 245 124 26 chrX 162603249 162603356 -4046940 + LTR16A LTR ERVL 326 443 -8 1 1825 699 75 0 0 chrX 162603396 162603490 -4046806 + (GA)n Simple_repeat Simple_repeat 1 94 0 1 1825 234 184 0 0 chrX 162603599 162603637 -4046659 - tRNA-Met_ tRNA tRNA -38 38 1 1 1825 442 238 0 12 chrX 162603718 162603799 -4046497 - RSINE1 SINE B4 -85 80 1 1 1825 426 250 26 9 chrX 162603800 162603913 -4046383 - PB1D10 SINE Alu 0 117 3 1 1825 690 75 0 0 chrX 162604219 162604312 -4045984 + (GGGGA)n Simple_repeat Simple_repeat 4 96 0 1 1825 678 154 100 0 chrX 162604914 162605044 -4045252 - URR1B DNA MER1_type 0 225 83 1 1825 238 293 133 0 chrX 162605155 162605230 -4045066 + MER20 DNA MER1_type 2 86 -133 1 1825 365 277 21 0 chrX 162605241 162605335 -4044961 + MER20 DNA MER1_type 119 214 -5 1 1825 646 242 70 27 chrX 162605962 162606149 -4044147 + MER20 DNA MER1_type 8 202 -17 1 1825 387 0 0 0 chrX 162606727 162606770 -4043526 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1825 23 78 0 0 chrX 162607070 162607121 -4043175 + AT_rich Low_complexity Low_complexity 1 51 0 1 1825 446 291 131 15 chrX 162607181 162607380 -4042916 - ID_B1 SINE B4 0 224 3 1 1825 328 237 84 57 chrX 162607412 162607543 -4042753 + PB1D9 SINE Alu 1 147 -2 1 1825 264 241 100 33 chrX 162607545 162607665 -4042631 - MER33 DNA MER1_type -179 145 18 1 1825 215 356 23 11 chrX 162608695 162608783 -4041513 + MER5B DNA MER1_type 31 119 -59 1 1825 319 196 0 0 chrX 162610692 162610743 -4039553 + RSINE1 SINE B4 2 52 -113 1 1825 1022 178 58 0 chrX 162612455 162612646 -4037650 - B3 SINE B2 -10 206 5 1 1825 23 0 0 0 chrX 162613033 162613056 -4037240 + AT_rich Low_complexity Low_complexity 1 23 0 1 1825 246 208 0 0 chrX 162613060 162613113 -4037183 + MER58C DNA MER1_type 148 200 -15 1 1825 668 188 36 14 chrX 162614270 162614410 -4035886 - B1F SINE Alu -6 143 1 1 1825 219 36 0 0 chrX 162614606 162614634 -4035662 + (TTA)n Simple_repeat Simple_repeat 1 28 0 1 1825 456 19 0 0 chrX 162614921 162614974 -4035322 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1825 1664 26 0 5 chrX 162615039 162615232 -4035064 + B2_Mm1a SINE B2 2 193 0 1 1825 521 180 50 75 chrX 162615392 162615512 -4034784 - PB1D7 SINE Alu 0 120 4 1 1825 323 263 209 8 chrX 162615956 162616090 -4034206 + RSINE1 SINE B4 3 163 -2 1 1825 593 209 21 7 chrX 162616184 162616324 -4033972 + B1_Mus1 SINE Alu 6 147 -1 1 1825 213 121 0 0 chrX 162616324 162616357 -4033939 + (GAAAA)n Simple_repeat Simple_repeat 1 33 0 1 1825 264 179 18 0 chrX 162616798 162616854 -4033442 + MER46C DNA MER2_type 272 328 -10 1 1825 730 219 225 3 chrX 162617323 162617629 -4032667 - MTE2b LTR MaLR 0 379 6 1 1825 1400 201 103 21 chrX 162617781 162617952 -4032344 + ORR1D2 LTR MaLR 1 176 -194 1 1825 585 0 0 0 chrX 162617952 162618017 -4032279 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 1825 1400 201 103 21 chrX 162618017 162618185 -4032111 + ORR1D2 LTR MaLR 177 368 -2 1 1825 275 268 94 44 chrX 162618936 162619116 -4031180 - MIRb SINE MIR 0 268 80 1 1825 334 270 36 35 chrX 162619574 162619692 -4030604 - PB1D10 SINE Alu -7 113 1 1 1825 719 260 83 0 chrX 162619969 162620138 -4030158 + B3 SINE B2 1 183 -33 1 1825 518 279 0 8 chrX 162620247 162620377 -4029919 - RSINE1 SINE B4 -35 130 2 1 1825 582 304 77 59 chrX 162620775 162621062 -4029234 + B4A SINE B4 1 292 0 1 1825 287 282 0 0 chrX 162621080 162621151 -4029145 + ID4 SINE ID 13 83 0 1 1825 551 287 31 13 chrX 162622592 162622751 -4027545 - B3A SINE B2 -29 169 8 1 1825 883 166 6 6 chrX 162623028 162623198 -4027098 - URR1B DNA MER1_type 0 225 56 1 1825 273 274 146 17 chrX 162623217 162623395 -4026901 - MLT1C LTR MaLR -193 274 74 1 1825 371 292 109 86 chrX 162623520 162623868 -4026428 - MTEa LTR MaLR -23 356 1 1 1825 459 302 94 6 chrX 162624280 162624450 -4025846 + ID_B1 SINE B4 12 196 -28 1 1825 1740 89 18 72 chrX 162624489 162624766 -4025530 + L1_Mus1 LINE L1 6306 6567 0 2 1825 303 264 175 64 chrX 162625363 162625520 -4024776 - B3A SINE B2 -25 191 20 2 1825 439 323 8 0 chrX 162625512 162625645 -4024651 - B1_Mur2 SINE Alu -15 134 1 2 1825 739 241 83 41 chrX 162626298 162626540 -4023756 + B4A SINE B4 41 292 0 2 1825 390 283 0 54 chrX 162626579 162626691 -4023605 + RSINE1 SINE B4 3 108 -57 2 1825 625 98 119 24 chrX 162627766 162627892 -4022404 - L1_Mus3 LINE L1 -7 6631 6494 2 1825 1006 57 0 34 chrX 162628083 162628229 -4022067 + B1_Mm SINE Alu 2 142 -5 2 1825 634 307 58 0 chrX 162628251 162628413 -4021883 - MER58A DNA MER1_type -1 223 56 2 1825 192 40 0 0 chrX 162628413 162628438 -4021858 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 2 1825 634 307 58 0 chrX 162628438 162628464 -4021832 - MER58A DNA MER1_type -169 55 25 2 1825 1178 23 0 0 chrX 162628976 162629109 -4021187 - B1_Mm SINE Alu -14 133 1 2 1825 2646 40 62 6 chrX 162629231 162629555 -4020741 + ORR1A1 LTR MaLR 1 342 -4 2 1825 405 70 0 0 chrX 162629889 162629946 -4020350 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1825 276 372 69 0 chrX 162630228 162630373 -4019923 - MER21B LTR ERV1 -690 173 19 2 1825 766 268 47 5 chrX 162630463 162630677 -4019619 + ID_B1 SINE B4 2 224 0 2 1825 1337 182 137 23 chrX 162630874 162631090 -4019206 - MTC LTR MaLR -15 406 169 2 1825 234 62 0 0 chrX 162631090 162631122 -4019174 + (GTTTG)n Simple_repeat Simple_repeat 2 33 0 2 1825 625 165 190 0 chrX 162631122 162631243 -4019053 - B1_Mm SINE Alu -2 145 2 2 1825 1337 182 137 23 chrX 162631243 162631368 -4018928 - MTC LTR MaLR -253 168 26 2 1825 603 0 0 0 chrX 162631398 162631465 -4018831 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1825 353 244 67 0 chrX 162631477 162631567 -4018729 - ID_B1 SINE B4 -8 216 121 2 1825 627 199 6 93 chrX 162631746 162631907 -4018389 + B1_Mm SINE Alu 1 147 0 2 1825 372 276 78 18 chrX 162632081 162632247 -4018049 + MLT1D LTR MaLR 74 249 -256 2 1825 1775 135 107 27 chrX 162632300 162632636 -4017660 + Lx LINE L1 6292 6654 0 2 1825 434 279 155 0 chrX 162632637 162632798 -4017498 + MLT1D LTR MaLR 316 501 -4 2 1825 1667 92 100 132 chrX 162633214 162633554 -4016742 - ORR1A4 LTR MaLR 0 329 1 2 1825 354 244 151 0 chrX 162633645 162633764 -4016532 + L1MB7 LINE L1 5854 5990 -194 2 1825 1743 196 44 11 chrX 162634283 162634645 -4015651 - ORR1D1 LTR MaLR 0 374 1 2 1825 746 298 42 48 chrX 162634745 162635101 -4015195 + ORR1E LTR MaLR 6 359 0 2 1825 496 290 122 0 chrX 162635186 162635407 -4014889 + L1MA5 LINE L1 6053 6300 0 2 1825 207 216 19 19 chrX 162635716 162635768 -4014528 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 1825 247 119 0 0 chrX 162635789 162635831 -4014465 - B1_Mur4 SINE Alu -1 149 108 2 1825 26 30 0 0 chrX 162635831 162635864 -4014432 + AT_rich Low_complexity Low_complexity 1 33 0 2 1825 703 214 142 6 chrX 162635919 162636088 -4014208 - ID_B1 SINE B4 -24 200 9 2 1825 211 269 0 19 chrX 162637663 162637716 -4012580 + B1F2 SINE Alu 1 52 -97 2 1825 284 273 91 0 chrX 162638733 162638821 -4011475 + MER3 DNA MER1_type 1 96 -113 2 1825 610 291 28 11 chrX 162638961 162639138 -4011158 + B3A SINE B2 1 180 -18 2 1825 426 275 11 0 chrX 162639233 162639324 -4010972 + RSINE1 SINE B4 36 127 -38 2 1825 701 167 69 48 chrX 162639381 162639491 -4010805 - B1_Mur2 SINE Alu -1 148 30 2 1825 1963 202 28 108 chrX 162639491 162640064 -4010232 + RLTR11A2 LTR ERVK 1 527 0 2 1825 701 167 69 48 chrX 162640064 162640098 -4010198 - B1_Mur2 SINE Alu -120 29 1 2 1825 208 348 14 0 chrX 162640387 162640456 -4009840 + (TG)n Simple_repeat Simple_repeat 1 70 0 2 1825 1519 199 30 14 chrX 162640485 162640846 -4009450 + RLTR22_Mur LTR ERVK 443 809 -1039 2 1825 637 107 3 3 chrX 162640855 162640954 -4009342 + ORR1C1 LTR MaLR 271 377 -1 2 1825 729 270 32 0 chrX 162640955 162641144 -4009152 + B4A SINE B4 98 292 0 2 1825 293 62 0 20 chrX 162641418 162641467 -4008829 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1825 784 205 53 7 chrX 162641474 162641626 -4008670 - B3 SINE B2 -57 159 1 2 1825 433 359 55 62 chrX 162641827 162642287 -4008009 + MLT1J LTR MaLR 1 499 -13 2 1825 243 241 0 32 chrX 162642386 162642449 -4007847 + PB1D10 SINE Alu 54 125 -2 2 1825 415 293 152 64 chrX 162642456 162642660 -4007636 + B4 SINE B4 12 233 -59 2 1825 303 320 13 0 chrX 162642650 162642725 -4007571 + RSINE1 SINE B4 82 157 -8 2 1825 380 20 20 0 chrX 162643511 162643560 -4006736 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 1825 218 156 22 0 chrX 162644254 162644299 -4005997 + GA-rich Low_complexity Low_complexity 4 49 0 2 1825 1687 202 18 42 chrX 162644612 162644995 -4005301 - ORR1D1 LTR MaLR 0 374 1 2 1825 2941 34 3 0 chrX 162645250 162645599 -4004697 + L1_Mus1 LINE L1 6218 6567 0 2 1825 880 246 38 9 chrX 162645622 162645835 -4004461 + ID_B1 SINE B4 1 219 -5 2 1825 433 349 48 84 chrX 162645979 162646311 -4003985 + MLT1J LTR MaLR 101 420 -92 2 1825 1213 62 0 0 chrX 162646435 162646581 -4003715 - B1_Mm SINE Alu -1 146 1 2 1825 252 0 0 0 chrX 162647594 162647622 -4002674 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2 1825 306 250 0 14 chrX 162648049 162648118 -4002178 - ID4_ SINE ID 0 83 16 2 1825 219 146 0 0 chrX 162648149 162648190 -4002106 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 2 1825 659 275 0 27 chrX 162648220 162648366 -4001930 - RSINE1 SINE B4 -13 152 11 2 1825 3967 169 91 68 chrX 162648373 162649255 -4001041 + RMER19B LTR ERVK 1 902 0 2 1825 22 0 0 0 chrX 162649602 162649624 -4000672 + AT_rich Low_complexity Low_complexity 1 22 0 2 1825 258 304 21 32 chrX 162649647 162649742 -4000554 - L2 LINE L2 -370 3049 2956 2 1825 850 211 10 54 chrX 162649898 162650103 -4000193 + ID_B1 SINE B4 28 223 -1 2 1825 475 222 0 0 chrX 162650124 162650214 -4000082 + B1_Mur2 SINE Alu 21 110 -39 2 1825 1277 249 178 46 chrX 162650511 162650990 -3999306 + RMER1B Other Other 1 542 -524 2 1825 4200 179 76 50 chrX 162650963 162651866 -3998430 + RMER1A Other Other 1 927 -103 2 1825 460 188 0 0 chrX 162651870 162651955 -3998341 - B4A SINE B4 -206 86 2 2 1825 1084 113 0 0 chrX 162652147 162652288 -3998008 - B1_Mus2 SINE Alu -6 141 1 2 1825 474 274 45 11 chrX 162652289 162652466 -3997830 - L1M5 LINE L1 -418 5706 5524 2 1825 745 260 14 48 chrX 162653683 162653893 -3996403 + ID_B1 SINE B4 2 204 -20 2 1825 189 0 0 0 chrX 162653911 162653932 -3996364 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 1825 416 232 71 8 chrX 162654298 162654424 -3995872 - MER5B DNA MER1_type -44 134 1 2 1825 300 198 267 38 chrX 162655824 162655929 -3994367 + RSINE1 SINE B4 14 142 -23 2 1825 202 302 0 0 chrX 162656710 162656763 -3993533 + CT-rich Low_complexity Low_complexity 4 56 0 2 1825 697 200 171 6 chrX 162656836 162657017 -3993279 - ID_B1 SINE B4 -12 212 2 2 1825 420 20 0 0 chrX 162657227 162657276 -3993020 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1825 369 333 81 7 chrX 162657865 162658013 -3992283 - RSINE1 SINE B4 -6 159 1 2 1825 430 177 188 0 chrX 162658124 162658220 -3992076 - PB1D10 SINE Alu 0 117 4 2 1825 219 139 0 0 chrX 162658244 162658280 -3992016 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 1825 841 109 7 28 chrX 162658910 162659052 -3991244 + B1_Mus1 SINE Alu 2 140 -8 2 1825 235 284 102 0 chrX 162659166 162659254 -3991042 + ID_B1 SINE B4 127 223 -1 2 1825 622 270 15 44 chrX 162659255 162659460 -3990836 + L1MB7 LINE L1 5681 5879 -305 2 1825 264 311 57 62 chrX 162659531 162659723 -3990573 - Lx8 LINE L1 -22 7451 7261 2 1825 322 171 51 26 chrX 162659722 162659800 -3990496 + L1MB7 LINE L1 5895 5974 -210 2 1825 608 219 26 190 chrX 162659820 162660011 -3990285 - B3A SINE B2 -4 194 40 2 1825 1113 192 19 28 chrX 162660011 162660022 -3990274 - B3 SINE B2 -4 212 202 2 1825 270 0 0 0 chrX 162660022 162660052 -3990244 + (TTTTA)n Simple_repeat Simple_repeat 5 34 0 2 1825 1113 192 19 28 chrX 162660052 162660254 -3990042 - B3 SINE B2 -15 201 2 2 1825 608 219 26 190 chrX 162660254 162660288 -3990008 - B3A SINE B2 -159 39 6 2 1826 1077 171 169 30 chrX 162660420 162660716 -3989580 + Lx9 LINE L1 7305 7641 -3 2 1826 4542 32 0 0 chrX 162660894 162661418 -3988878 - L1Md_T LINE L1 0 6582 6059 2 1826 582 15 0 0 chrX 162661489 162661556 -3988740 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1826 683 191 16 0 chrX 162662383 162662509 -3987787 - ID_B1 SINE B4 -20 204 77 2 1826 671 280 11 16 chrX 162662810 162662995 -3987301 - ID_B1 SINE B4 -33 191 8 2 1826 892 218 35 5 chrX 162663268 162663466 -3986830 + ID_B1 SINE B4 13 216 -8 2 1826 306 0 0 0 chrX 162664038 162664072 -3986224 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1826 523 246 0 32 chrX 162664109 162664235 -3986061 + RSINE1 SINE B4 2 123 -42 2 1826 456 19 0 0 chrX 162664250 162664303 -3985993 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1826 300 27 0 0 chrX 162665899 162665936 -3984360 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 2 1826 225 220 60 0 chrX 162666038 162666088 -3984208 + MLT1A0 LTR MaLR 1 53 -321 2 1826 645 259 47 60 chrX 162666126 162666360 -3983936 + MLT1A0 LTR MaLR 133 363 -2 2 1826 321 252 364 0 chrX 162666967 162667118 -3983178 - B3 SINE B2 -10 206 1 2 1826 475 219 93 34 chrX 162667167 162667285 -3983011 - B3A SINE B2 -72 126 2 2 1826 602 272 46 55 chrX 162667303 162667521 -3982775 - B3 SINE B2 0 216 1 2 1826 306 281 27 135 chrX 162667858 162668043 -3982253 + RSINE1 SINE B4 1 165 0 2 1826 510 17 0 0 chrX 162668066 162668125 -3982171 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 1826 575 217 31 8 chrX 162668134 162668264 -3982032 - B1_Mur2 SINE Alu 0 149 17 3 1826 337 167 0 0 chrX 162668404 162668458 -3981838 - ID4_ SINE ID -12 71 18 3 1826 191 400 86 17 chrX 162669129 162669246 -3981050 + L3 LINE CR1 3382 3506 -983 3 1826 258 276 25 50 chrX 162669400 162669480 -3980816 + ID4_ SINE ID 3 80 -3 3 1826 236 308 143 45 chrX 162669645 162669757 -3980539 + RSINE1 SINE B4 43 165 0 3 1826 908 144 72 0 chrX 162669875 162670014 -3980282 + B1_Mur2 SINE Alu 1 149 0 3 1826 468 0 0 0 chrX 162670038 162670090 -3980206 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1826 234 0 0 0 chrX 162670090 162670115 -3980181 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 1826 288 239 0 15 chrX 162670141 162670209 -3980087 + tRNA-Ala-GCY_ tRNA tRNA 1 67 -8 3 1826 221 129 57 0 chrX 162670597 162670667 -3979629 + (CAAA)n Simple_repeat Simple_repeat 3 76 0 3 1826 652 271 50 15 chrX 162670713 162670725 -3979571 - ID_B1 SINE B4 -1 223 212 3 1826 228 35 0 0 chrX 162670725 162670754 -3979542 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 3 1826 652 271 50 15 chrX 162670754 162670943 -3979353 - ID_B1 SINE B4 -13 211 15 3 1826 948 301 138 24 chrX 162671286 162671904 -3978392 + L1MB4 LINE L1 5445 6135 -45 3 1826 783 223 0 0 chrX 162671904 162672052 -3978244 + B1_Mur3 SINE Alu 2 149 0 3 1826 948 301 138 24 chrX 162672052 162672091 -3978205 + L1MB4 LINE L1 6136 6177 -3 3 1826 757 277 68 94 chrX 162672335 162672613 -3977683 + RMER5 LTR ERV1 72 357 -177 3 1826 546 253 70 39 chrX 162672613 162672769 -3977527 + RSINE1 SINE B4 5 165 0 3 1826 757 277 68 94 chrX 162672769 162672807 -3977489 + RMER5 LTR ERV1 358 385 -149 3 1826 3907 54 27 0 chrX 162672807 162673287 -3977009 - L1_Mus1 LINE L1 -1 6566 6074 3 1826 757 277 68 94 chrX 162673287 162673439 -3976857 + RMER5 LTR ERV1 386 529 -5 3 1826 1144 219 55 105 chrX 162673539 162673938 -3976358 + MTE2a LTR MaLR 1 379 0 3 1826 188 150 0 70 chrX 162674244 162674287 -3976009 - L2 LINE L2 -582 2837 2798 3 1826 200 194 0 0 chrX 162674624 162674660 -3975636 + GA-rich Low_complexity Low_complexity 2 37 0 3 1826 586 274 11 6 chrX 162674810 162674986 -3975310 - L1M5 LINE L1 -418 5706 5530 3 1826 209 174 0 80 chrX 162676556 162676606 -3973690 + MIRm SINE MIR 125 170 -106 3 1826 223 123 68 34 chrX 162676907 162676966 -3973330 + (CAGCC)n Simple_repeat Simple_repeat 2 62 0 3 1826 21 36 0 0 chrX 162678250 162678278 -3972018 + AT_rich Low_complexity Low_complexity 1 28 0 3 1826 31 0 0 0 chrX 162678419 162678450 -3971846 + AT_rich Low_complexity Low_complexity 1 31 0 3 1826 1024 44 0 0 chrX 162678451 162678586 -3971710 - B1_Mus2 SINE Alu 0 147 13 3 1826 21 57 0 0 chrX 162679293 162679328 -3970968 + AT_rich Low_complexity Low_complexity 1 35 0 3 1826 843 217 90 9 chrX 162679447 162679670 -3970626 - L1MB7 LINE L1 -42 6142 5902 3 1826 467 244 10 9 chrX 162680094 162680210 -3970086 - PB1 SINE Alu 0 127 10 3 1826 653 234 22 10 chrX 162680278 162680436 -3969860 + ID_B1 SINE B4 86 248 -44 3 1826 384 207 11 58 chrX 162680500 162680587 -3969709 + RSINE1 SINE B4 83 165 0 3 1826 344 247 0 58 chrX 162680602 162680688 -3969608 + RSINE1 SINE B4 1 81 -84 3 1826 194 298 74 37 chrX 162681080 162681188 -3969108 + MIR SINE MIR 19 130 -78 3 1826 804 324 51 16 chrX 162681995 162682444 -3967852 - Tigger13a DNA MER2_type -138 633 169 3 1826 1113 219 137 3 chrX 162682539 162682823 -3967473 - MTE2b LTR MaLR 0 379 58 3 1826 358 188 45 101 chrX 162682841 162682930 -3967366 - MTE2b LTR MaLR -295 84 1 3 1826 204 139 28 0 chrX 162683487 162683523 -3966773 + (TTG)n Simple_repeat Simple_repeat 2 38 0 3 1826 587 269 50 19 chrX 162684314 162684473 -3965823 + RSINE1 SINE B4 2 165 0 3 1826 517 332 69 32 chrX 162684742 162684960 -3965336 - MER21B LTR ERV1 -371 492 267 3 1826 398 237 82 0 chrX 162685059 162685156 -3965140 - MER20 DNA MER1_type -69 150 46 3 1826 762 299 60 0 chrX 162685217 162685418 -3964878 + ID_B1 SINE B4 6 218 -6 3 1826 335 253 36 0 chrX 162686750 162686833 -3963463 + BC1_Mm scRNA scRNA 1 86 -66 3 1826 814 167 7 21 chrX 162686833 162686974 -3963322 + B1_Mur1 SINE Alu 1 139 -10 3 1826 336 102 0 0 chrX 162687048 162687097 -3963199 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 3 1826 8091 67 1 0 chrX 162687311 162688975 -3961321 - L1_Mus2 LINE L1 0 6566 4902 3 1826 297 0 0 0 chrX 162689113 162689146 -3961150 + (GA)n Simple_repeat Simple_repeat 1 33 0 3 1826 305 286 116 30 chrX 162689717 162689915 -3960381 - L1M5 LINE L1 -696 5544 5330 3 1826 254 270 13 26 chrX 162690256 162690332 -3959964 - B4A SINE B4 -50 242 168 3 1826 198 0 0 0 chrX 162690464 162690486 -3959810 + (TTG)n Simple_repeat Simple_repeat 3 24 0 3 1826 648 280 40 25 chrX 162690486 162690684 -3959612 - B3 SINE B2 -14 202 2 3 1826 384 206 0 0 chrX 162690691 162690764 -3959532 - B4A SINE B4 -196 96 24 3 1826 333 0 0 0 chrX 162690789 162690826 -3959470 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1826 248 315 152 0 chrX 162690935 162691119 -3959177 - L1M5 LINE L1 -1354 4792 4581 3 1826 379 338 43 0 chrX 162691517 162691656 -3958640 - ID_B1 SINE B4 0 224 80 3 1826 200 116 70 0 chrX 162691661 162691704 -3958592 + T-rich Low_complexity Low_complexity 6 51 0 3 1826 417 255 0 36 chrX 162691704 162691814 -3958482 - B1_Mur4 SINE Alu 0 120 15 3 1826 552 260 39 8 chrX 162692637 162692765 -3957531 + RSINE1 SINE B4 2 133 -32 3 1826 290 224 0 0 chrX 162692793 162692859 -3957437 + B1F1 SINE Alu 36 101 -19 3 1826 234 62 0 0 chrX 162692866 162692898 -3957398 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1826 235 324 0 0 chrX 162692912 162692983 -3957313 + ID_B1 SINE B4 80 150 -74 3 1826 876 124 22 0 chrX 162693413 162693550 -3956746 - B1_Mus1 SINE Alu 0 148 9 3 1826 357 279 0 51 chrX 162693924 162694022 -3956274 + ID4_ SINE ID 4 96 -56 3 1826 277 318 0 0 chrX 162694038 162694104 -3956192 + tRNA-Ala-GCY_ tRNA tRNA 3 68 -7 3 1826 882 52 0 0 chrX 162694271 162694387 -3955909 + (GGA)n Simple_repeat Simple_repeat 2 117 0 3 1826 582 258 177 10 chrX 162694398 162694590 -3955706 + ID_B1 SINE B4 1 224 0 3 1826 230 250 298 18 chrX 162694782 162694896 -3955400 - B1F SINE Alu -2 147 2 3 1826 36 62 0 0 chrX 162695828 162695892 -3954404 + AT_rich Low_complexity Low_complexity 1 64 0 3 1826 21 0 0 0 chrX 162696047 162696068 -3954228 + AT_rich Low_complexity Low_complexity 1 21 0 3 1826 734 205 60 0 chrX 162696132 162696283 -3954013 + RSINE1 SINE B4 3 162 -3 3 1826 374 200 25 0 chrX 162696390 162696470 -3953826 - ID4_ SINE ID 0 83 2 3 1826 289 378 28 0 chrX 162696559 162696702 -3953594 + B1_Mur3 SINE Alu 2 148 -1 3 1826 682 260 0 32 chrX 162697150 162697305 -3952991 - RSINE1 SINE B4 -14 151 2 3 1826 332 293 50 10 chrX 162697790 162697890 -3952406 + RSINE1 SINE B4 2 105 -60 3 1826 374 243 7 21 chrX 162699491 162699634 -3950662 + (TA)n Simple_repeat Simple_repeat 1 141 0 3 1826 206 243 42 14 chrX 162699642 162699713 -3950583 - MIR SINE MIR -17 245 173 3 1826 573 248 22 8 chrX 162700001 162700135 -3950161 - RSINE1 SINE B4 -29 136 1 3 1826 416 245 0 0 chrX 162700167 162700261 -3950035 - PB1D7 SINE Alu -6 114 21 3 1826 385 269 168 6 chrX 162701412 162701573 -3948723 - MER3 DNA MER1_type -5 204 18 3 1826 412 248 34 62 chrX 162701954 162702100 -3948196 - MER5B DNA MER1_type -18 160 19 3 1826 400 274 74 0 chrX 162702222 162702357 -3947939 - B1_Mur3 SINE Alu 0 149 5 3 1826 747 229 27 49 chrX 162702245 162702429 -3947867 - ID_B1 SINE B4 -27 197 18 3 1826 827 184 13 13 chrX 162702472 162702621 -3947675 - B1_Mur3 SINE Alu 0 149 1 3 1826 277 210 144 39 chrX 162702635 162702739 -3947557 - PB1D10 SINE Alu 0 117 3 3 1826 268 358 19 6 chrX 162702991 162703161 -3947135 + MIR SINE MIR 25 201 -67 3 1826 1201 196 14 9 chrX 162703221 162703443 -3946853 + ID_B1 SINE B4 2 224 0 3 1826 201 39 0 0 chrX 162703443 162703469 -3946827 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1826 301 272 22 0 chrX 162703582 162703674 -3946622 + L1MC3 LINE L1 7682 7775 -10 3 1826 8285 43 17 0 chrX 162703731 162705174 -3945122 - L1Md_F2 LINE L1 -5 6577 5110 3 1826 430 198 41 83 chrX 162705431 162705552 -3944744 + PB1D10 SINE Alu 1 116 -1 3 1826 385 103 29 0 chrX 162705563 162705631 -3944665 + (GGA)n Simple_repeat Simple_repeat 3 72 0 3 1826 984 274 80 84 chrX 162705647 162705839 -3944457 - L1MC4a LINE L1 -21 7861 7666 3 1826 3092 37 16 3 chrX 162705839 162706217 -3944079 - L1Md_F2 LINE L1 -1 6581 6199 3 1826 984 274 80 84 chrX 162706217 162706335 -3943961 - L1MC4a LINE L1 -217 7665 7554 3 1826 187 31 62 0 chrX 162706335 162706367 -3943929 + (CAA)n Simple_repeat Simple_repeat 3 36 0 3 1826 984 274 80 84 chrX 162706367 162706388 -3943908 - L1MC4a LINE L1 -329 7553 7553 3 1826 944 245 5 9 chrX 162706388 162706598 -3943698 - ID_B1 SINE B4 -14 210 2 3 1826 984 274 80 84 chrX 162706598 162706789 -3943507 - L1MC4a LINE L1 -329 7553 7341 3 1826 232 194 60 0 chrX 162706821 162706888 -3943408 - L1MC1 LINE L1 0 6333 6263 3 1826 261 0 0 0 chrX 162707289 162707318 -3942978 + (TAG)n Simple_repeat Simple_repeat 1 29 0 3 1826 604 221 33 1 chrX 162707319 162707460 -3942836 - B1_Mur2 SINE Alu -5 144 1 3 1826 380 246 23 109 chrX 162707522 162707650 -3942646 + PB1D10 SINE Alu 1 117 0 3 1826 223 288 147 24 chrX 162707836 162707961 -3942335 + PB1D7 SINE Alu 5 146 -2 3 1826 388 270 63 42 chrX 162708396 162708415 -3941881 + ID_B1 SINE B4 70 215 -9 3 1826 559 210 65 0 chrX 162708415 162708539 -3941757 + B1F SINE Alu 9 140 -9 3 1826 610 281 48 16 chrX 162708604 162708651 -3941645 - B3A SINE B2 -4 194 145 4 1826 402 21 0 0 chrX 162708651 162708698 -3941598 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 1826 318 26 0 0 chrX 162708698 162708736 -3941560 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1826 610 281 48 16 chrX 162708736 162708875 -3941421 - B3A SINE B2 -54 144 2 4 1826 526 82 12 12 chrX 162709223 162709309 -3940987 + (TA)n Simple_repeat Simple_repeat 2 87 0 4 1826 908 199 71 43 chrX 162710094 162710304 -3939992 - B3 SINE B2 0 216 1 4 1826 741 214 34 14 chrX 162710460 162710632 -3939664 + ID_B1 SINE B4 67 242 -50 4 1826 222 281 0 0 chrX 162710914 162710971 -3939325 - ID4_ SINE ID -6 77 21 4 1826 362 266 88 31 chrX 162711503 162711662 -3938634 + MIRb SINE MIR 83 250 -18 4 1826 326 42 21 0 chrX 162711785 162711833 -3938463 + (CAAAAA)n Simple_repeat Simple_repeat 3 51 0 4 1826 1162 293 3 7 chrX 162712090 162712379 -3937917 + B4 SINE B4 1 288 -4 4 1826 695 260 35 56 chrX 162713114 162713408 -3936888 - MTEa LTR MaLR 0 379 98 4 1826 1298 97 11 0 chrX 162713671 162713847 -3936449 + B2_Mm1t SINE B2 2 179 -14 4 1826 426 85 0 0 chrX 162714388 162714447 -3935849 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1826 332 243 17 59 chrX 162715039 162715051 -3935245 + MT2B LTR ERVL 152 158 -443 4 1826 578 200 50 0 chrX 162715051 162715171 -3935125 + B1_Mus2 SINE Alu 1 126 -21 4 1826 180 87 0 98 chrX 162715171 162715222 -3935074 + GA-rich Low_complexity Low_complexity 4 49 0 4 1826 272 217 116 32 chrX 162715234 162715329 -3934967 + L1MA6 LINE L1 6126 6228 -72 4 1826 338 328 30 30 chrX 162715461 162715596 -3934700 - B1F2 SINE Alu -10 139 5 4 1826 658 276 5 94 chrX 162715484 162715696 -3934600 - ID_B1 SINE B4 -28 196 4 4 1826 354 315 8 30 chrX 162715699 162715833 -3934463 - RSINE1 SINE B4 -23 142 12 4 1826 396 0 0 0 chrX 162716288 162716332 -3933964 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1826 22 56 0 0 chrX 162716386 162716422 -3933874 + AT_rich Low_complexity Low_complexity 1 36 0 4 1826 536 252 8 0 chrX 162716444 162716562 -3933734 - RSINE1 SINE B4 -31 134 16 4 1826 1221 168 9 14 chrX 162716562 162716785 -3933511 + URR1B DNA MER1_type 2 223 -2 4 1826 180 0 0 0 chrX 162716855 162716875 -3933421 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1826 827 174 14 7 chrX 162716875 162717014 -3933282 - B1_Mur4 SINE Alu -10 140 1 4 1826 250 257 95 0 chrX 162717060 162717134 -3933162 - ID2 SINE ID 0 83 3 4 1826 870 223 66 20 chrX 162717228 162717425 -3932871 - ID_B1 SINE B4 -17 207 2 4 1826 803 280 0 15 chrX 162718408 162718611 -3931685 + ID_B1 SINE B4 22 221 -3 4 1826 1617 287 45 51 chrX 162718787 162719473 -3930823 + Lx9 LINE L1 6848 7529 -115 4 1826 541 305 60 15 chrX 162719572 162719772 -3930524 + B4A SINE B4 66 274 -18 4 1826 447 19 0 0 chrX 162719786 162719838 -3930458 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1826 22 0 0 0 chrX 162720112 162720134 -3930162 + AT_rich Low_complexity Low_complexity 1 22 0 4 1826 566 265 14 7 chrX 162720709 162720857 -3929439 - B1F SINE Alu 0 149 1 4 1826 382 283 0 20 chrX 162722003 162722104 -3928192 + MER58B DNA MER1_type 7 105 -236 4 1826 327 85 0 0 chrX 162722247 162722294 -3928002 + (CATA)n Simple_repeat Simple_repeat 3 49 0 4 1826 357 248 40 78 chrX 162722435 162722560 -3927736 - PB1 SINE Alu 0 120 2 4 1826 357 331 0 46 chrX 162722560 162722710 -3927586 + MER58B DNA MER1_type 199 341 0 4 1826 360 0 0 0 chrX 162722886 162722926 -3927370 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1826 665 255 106 75 chrX 162723150 162723404 -3926892 - B4 SINE B4 -30 262 1 4 1826 306 0 0 0 chrX 162723508 162723542 -3926754 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1826 487 243 0 18 chrX 162723837 162723946 -3926350 - PB1D10 SINE Alu -10 107 1 4 1826 207 307 0 74 chrX 162725150 162725245 -3925051 - MIRm SINE MIR -5 271 184 4 1826 198 270 79 0 chrX 162725573 162725636 -3924660 - MER5B DNA MER1_type 0 178 111 4 1826 535 261 0 68 chrX 162725668 162725816 -3924480 + RSINE1 SINE B4 22 159 -6 4 1826 1225 138 113 5 chrX 162725896 162726100 -3924196 - URR1A DNA MER1_type 0 226 1 4 1826 383 243 148 9 chrX 162726220 162726328 -3923968 + ID_B1 SINE B4 86 208 -16 4 1826 221 402 16 0 chrX 162726505 162726632 -3923664 + L2a LINE L2 3298 3426 0 4 1826 245 283 172 8 chrX 162726945 162727073 -3923223 + MER5A1 DNA MER1_type 1 149 -17 4 1826 198 103 0 0 chrX 162727380 162727409 -3922887 + (GGGGA)n Simple_repeat Simple_repeat 5 33 0 4 1826 924 255 20 40 chrX 162727868 162728166 -3922130 + B4 SINE B4 1 292 0 4 1826 182 283 57 57 chrX 162728641 162728746 -3921550 - MER5B DNA MER1_type -66 112 8 4 1826 482 283 21 14 chrX 162729987 162730127 -3920169 - ID_B1 SINE B4 -2 222 82 4 1826 487 260 50 17 chrX 162730312 162730499 -3919797 - L1MA5 LINE L1 -22 6278 6081 4 1826 1565 251 36 5 chrX 162730499 162730891 -3919405 + MTD LTR MaLR 2 405 -14 4 1826 725 282 11 33 chrX 162731288 162731468 -3918828 + B3A SINE B2 1 176 -22 4 1826 496 254 16 17 chrX 162731507 162731655 -3918641 + B3A SINE B2 60 203 -13 4 1826 556 239 0 0 chrX 162732200 162732317 -3917979 - B4A SINE B4 -26 266 150 4 1826 276 284 136 0 chrX 162732331 162732412 -3917884 - B4 SINE B4 -200 92 1 4 1826 420 277 50 21 chrX 162732680 162732765 -3917531 + B4A SINE B4 3 91 -201 4 1826 268 295 74 0 chrX 162732765 162732860 -3917436 + PB1D10 SINE Alu 1 102 -15 4 1826 238 146 62 0 chrX 162732882 162732930 -3917366 - PB1 SINE Alu -2 125 75 4 1826 378 152 0 0 chrX 162732887 162732946 -3917350 - ID_B1 SINE B4 -8 216 158 4 1826 1693 121 37 22 chrX 162732966 162733287 -3917009 + RMER4A LTR ERVK 21 346 -120 4 1826 356 0 23 0 chrX 162733287 162733331 -3916965 + (TC)n Simple_repeat Simple_repeat 2 46 0 4 1826 1076 239 70 4 chrX 162734233 162734489 -3915807 - B4 SINE B4 -10 282 10 4 1826 607 157 18 17 chrX 162734543 162734665 -3915631 + MTEa LTR MaLR 228 376 -3 4 1826 771 220 30 9 chrX 162734710 162734894 -3915402 - B3A SINE B2 0 216 33 4 1826 204 97 0 0 chrX 162734894 162734925 -3915371 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1826 318 50 0 0 chrX 162734936 162734976 -3915320 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 1826 515 295 74 0 chrX 162735010 162735200 -3915096 - L1MB5 LINE L1 -61 6113 5910 4 1826 605 316 72 25 chrX 162735215 162735536 -3914760 - L1MB5 LINE L1 -297 5882 5532 4 1826 326 283 226 0 chrX 162736482 162736588 -3913708 - ID_B1 SINE B4 -7 217 88 4 1826 1026 171 20 15 chrX 162736859 162737053 -3913243 + B3 SINE B2 14 210 -6 4 1826 2914 83 55 0 chrX 162737053 162737452 -3912844 - BGLII_Mus LTR ERVK 0 422 2 4 1826 237 269 116 36 chrX 162737488 162737600 -3912696 - L1MB5 LINE L1 -21 6153 6033 4 1826 186 43 0 0 chrX 162737612 162737635 -3912661 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4 1826 1157 76 0 0 chrX 162737635 162737780 -3912516 - B1_Mus1 SINE Alu -3 145 1 4 1826 857 216 67 21 chrX 162737909 162738103 -3912193 + B3 SINE B2 5 207 -9 4 1826 275 267 54 32 chrX 162738811 162738904 -3911392 + MER94 DNA AcHobo 5 99 -35 4 1826 648 203 78 0 chrX 162738913 162739041 -3911255 + B3 SINE B2 2 139 -77 4 1826 422 226 164 9 chrX 162739063 162739179 -3911117 + B4A SINE B4 100 233 -59 4 1826 298 222 132 16 chrX 162739433 162739527 -3910769 - PB1D7 SINE Alu -10 110 9 4 1826 279 0 0 0 chrX 162739578 162739609 -3910687 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1826 823 284 52 100 chrX 162739749 162739868 -3910428 - L1MB7 LINE L1 -19 6165 6067 4 1826 472 262 34 68 chrX 162739868 162740073 -3910223 - B3A SINE B2 0 198 1 4 1826 823 284 52 100 chrX 162740073 162740115 -3910181 - L1MB7 LINE L1 -118 6066 6036 4 1826 438 232 0 0 chrX 162740115 162740197 -3910099 + ID4_ SINE ID 2 83 0 4 1826 823 284 52 100 chrX 162740197 162740473 -3909823 - L1MB7 LINE L1 -149 6035 5748 4 1826 252 120 0 0 chrX 162741291 162741341 -3908955 + (T)n Simple_repeat Simple_repeat 1 50 0 4 1826 1507 205 75 17 chrX 162741768 162742115 -3908181 - ORR1D2 LTR MaLR -3 367 1 4 1826 1415 202 106 56 chrX 162742348 162742688 -3907608 + ORR1E LTR MaLR 1 357 -2 4 1826 559 268 94 25 chrX 162742972 162743175 -3907121 - ID_B1 SINE B4 -6 218 2 4 1826 463 328 33 0 chrX 162743234 162743356 -3906940 - RSINE1 SINE B4 -34 131 6 4 1826 213 196 143 0 chrX 162743392 162743448 -3906848 - MIRc SINE MIR -31 237 174 4 1826 453 280 0 23 chrX 162743845 162743973 -3906323 + RSINE1 SINE B4 1 125 -40 4 1826 814 308 18 0 chrX 162744263 162744484 -3905812 + B4A SINE B4 1 225 -67 4 1826 884 158 14 7 chrX 162744500 162744647 -3905649 + B1_Mur1 SINE Alu 2 149 0 4 1826 669 281 91 33 chrX 162745272 162745548 -3904748 + B4 SINE B4 1 292 0 4 1826 412 289 66 0 chrX 162747457 162747578 -3902718 - ID_B1 SINE B4 -94 130 2 4 1826 255 261 0 42 chrX 162747791 162747863 -3902433 - tRNA-Ala-GCY_ tRNA tRNA -6 69 1 4 1826 351 175 0 0 chrX 162747804 162747867 -3902429 - ID SINE ID -159 65 3 4 1826 919 194 43 43 chrX 162748401 162748611 -3901685 - B3 SINE B2 -3 213 4 4 1826 273 295 126 0 chrX 162748680 162748775 -3901521 - PB1 SINE Alu -8 119 13 4 1826 705 207 26 52 chrX 162749028 162749181 -3901115 + B1_Mur1 SINE Alu 1 149 0 4 1826 389 191 157 0 chrX 162749834 162749923 -3900373 - MIR SINE MIR -1 261 159 4 1826 297 296 48 14 chrX 162750098 162750244 -3900052 + L1ME1 LINE L1 5672 5822 -342 5 1826 371 331 34 17 chrX 162750243 162750421 -3899875 + L1ME1 LINE L1 5980 6160 -19 5 1826 26 0 0 0 chrX 162750526 162750552 -3899744 + AT_rich Low_complexity Low_complexity 1 26 0 5 1826 491 0 17 0 chrX 162750552 162750611 -3899685 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 1826 842 225 0 0 chrX 162750636 162750787 -3899509 - B3A SINE B2 -46 152 2 5 1826 552 121 0 0 chrX 162751388 162751479 -3898817 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 5 1826 2466 168 90 4 chrX 162751539 162752029 -3898267 - RMER5 LTR ERV1 0 534 3 5 1826 948 231 28 23 chrX 162752072 162752289 -3898007 - ID_B1 SINE B4 -6 218 1 5 1826 512 221 107 6 chrX 162752615 162752783 -3897513 - RMER5 LTR ERV1 0 534 350 5 1826 754 203 28 7 chrX 162752788 162752932 -3897364 + B1_Mur2 SINE Alu 2 148 -1 5 1826 293 250 9 74 chrX 162752993 162753101 -3897195 + MLT1D LTR MaLR 7 107 -398 5 1826 355 284 42 33 chrX 162754338 162754458 -3895838 + B4A SINE B4 3 123 -169 5 1826 261 0 0 0 chrX 162755052 162755081 -3895215 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 1826 432 0 0 0 chrX 162755081 162755128 -3895168 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 1826 334 296 127 50 chrX 162755224 162755585 -3894711 + MER77 LTR ERVL 146 597 -10 5 1826 261 302 92 20 chrX 162756046 162756144 -3894152 - PB1D10 SINE Alu 0 117 13 5 1826 658 179 19 103 chrX 162756229 162756306 -3893990 + B1_Mus2 SINE Alu 4 65 -82 5 1826 441 0 0 0 chrX 162756306 162756355 -3893941 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1826 658 179 19 103 chrX 162756355 162756433 -3893863 + B1_Mus2 SINE Alu 66 146 -1 5 1826 498 306 83 44 chrX 162756472 162756653 -3893643 + MER58A DNA MER1_type 13 200 -24 5 1826 265 318 0 0 chrX 162756793 162756856 -3893440 - RSINE1 SINE B4 -2 163 101 5 1826 302 143 0 0 chrX 162756862 162756911 -3893385 + PB1D7 SINE Alu 5 53 -67 5 1826 459 0 0 0 chrX 162756912 162756963 -3893333 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1826 347 208 111 30 chrX 162756997 162757096 -3893200 - RSINE1 SINE B4 -48 117 11 5 1826 405 0 0 0 chrX 162757111 162757156 -3893140 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 1826 465 34 0 0 chrX 162757156 162757214 -3893082 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1826 651 241 12 24 chrX 162757230 162757396 -3892900 - ORR1E LTR MaLR -186 173 10 5 1826 856 146 36 0 chrX 162757420 162757557 -3892739 - B1_Mus1 SINE Alu -2 146 5 5 1826 339 280 33 85 chrX 162758015 162758126 -3892170 - B1F SINE Alu -27 122 4 5 1826 600 40 0 0 chrX 162758126 162758201 -3892095 + (TG)n Simple_repeat Simple_repeat 2 76 0 5 1826 339 256 8 114 chrX 162758201 162758251 -3892045 - B1F SINE Alu -95 54 5 5 1826 447 323 17 65 chrX 162758459 162758691 -3891605 - B4 SINE B4 -71 221 1 5 1826 732 281 18 18 chrX 162758709 162758930 -3891366 - B4A SINE B4 -71 221 1 5 1826 339 236 0 0 chrX 162759338 162759410 -3890886 + ID4_ SINE ID 3 74 -9 5 1826 1210 61 0 0 chrX 162759909 162760057 -3890239 - B1_Mus1 SINE Alu 0 148 1 5 1826 244 261 0 0 chrX 162760161 162760226 -3890070 - ID2 SINE ID -17 66 2 5 1826 491 260 0 0 chrX 162760669 162760773 -3889523 + RSINE1 SINE B4 4 107 -58 5 1826 486 0 0 0 chrX 162760797 162760851 -3889445 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 1826 466 191 0 0 chrX 162760985 162761074 -3889222 + PB1D9 SINE Alu 21 109 -11 5 1826 1222 234 170 42 chrX 162761094 162761669 -3888627 + L1MB8 LINE L1 5254 5902 -276 5 1826 1514 65 5 5 chrX 162761669 162761870 -3888426 + L1_Mus2 LINE L1 6366 6566 0 5 1826 697 271 53 24 chrX 162761886 162762094 -3888202 + B3 SINE B2 1 214 -2 5 1826 267 79 0 0 chrX 162762821 162762859 -3887437 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1826 343 293 47 67 chrX 162762886 162763036 -3887260 - B4 SINE B4 -19 273 127 5 1826 379 261 23 0 chrX 162762981 162763069 -3887227 - PB1 SINE Alu -24 103 14 5 1826 243 0 0 0 chrX 162763614 162763641 -3886655 + (TTG)n Simple_repeat Simple_repeat 2 28 0 5 1826 186 43 0 0 chrX 162763787 162763810 -3886486 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 1826 501 271 0 33 chrX 162764094 162764216 -3886080 + B1F2 SINE Alu 24 141 -8 5 1826 688 260 60 0 chrX 162764226 162764376 -3885920 + RSINE1 SINE B4 2 160 -5 5 1826 827 224 112 0 chrX 162764434 162764613 -3885683 + B3 SINE B2 1 199 -17 5 1826 21 0 0 0 chrX 162764614 162764635 -3885661 + AT_rich Low_complexity Low_complexity 1 21 0 5 1826 306 322 17 12 chrX 162764663 162764836 -3885460 + (TATATG)n Simple_repeat Simple_repeat 1 174 0 5 1826 333 0 0 0 chrX 162764841 162764878 -3885418 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 1826 512 209 61 0 chrX 162764894 162765042 -3885254 - Lx6 LINE L1 -14 7446 7290 5 1826 441 232 28 28 chrX 162765745 162765887 -3884409 + RMER15 LTR ERVL 356 497 -78 5 1826 324 274 443 26 chrX 162766181 162766375 -3883921 - B4A SINE B4 -17 275 1 5 1826 198 0 0 0 chrX 162767588 162767610 -3882686 + (CATA)n Simple_repeat Simple_repeat 2 23 0 5 1826 452 228 172 8 chrX 162767640 162767768 -3882528 - B1F2 SINE Alu 0 149 1 5 1826 384 22 0 0 chrX 162767974 162768019 -3882277 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1826 764 257 0 47 chrX 162768273 162768465 -3881831 + B3A SINE B2 4 186 -12 5 1826 492 279 7 35 chrX 162769277 162769422 -3880874 + B1F2 SINE Alu 1 141 -8 5 1826 764 180 43 7 chrX 162770733 162770873 -3879423 + B1_Mur2 SINE Alu 3 147 -2 5 1826 435 221 28 46 chrX 162771739 162771848 -3878448 + ID_B1 SINE B4 4 110 -114 5 1826 508 286 0 0 chrX 162772332 162772444 -3877852 + PB1D7 SINE Alu 1 112 -8 5 1826 873 234 104 0 chrX 162772914 162773115 -3877181 - ID_B1 SINE B4 -1 223 2 5 1826 471 100 0 0 chrX 162773396 162773466 -3876830 + (GGGAGA)n Simple_repeat Simple_repeat 4 73 0 5 1826 847 255 42 5 chrX 162774753 162774946 -3875350 + B3 SINE B2 2 201 -15 5 1826 21 57 0 0 chrX 162774994 162775029 -3875267 + AT_rich Low_complexity Low_complexity 1 35 0 5 1826 320 242 0 0 chrX 162775030 162775092 -3875204 + ID SINE ID 1 62 -162 5 1826 970 108 50 0 chrX 162775092 162775231 -3875065 + B1_Mus2 SINE Alu 2 147 0 5 1826 312 326 0 31 chrX 162775291 162775389 -3874907 + PB1D10 SINE Alu 1 95 -22 5 1826 382 89 0 43 chrX 162775558 162775628 -3874668 + (TCCC)n Simple_repeat Simple_repeat 3 69 0 5 1826 1306 114 217 75 chrX 162775951 162776102 -3874194 - RMER17C LTR ERVK 0 410 212 5 1826 500 30 15 0 chrX 162776102 162776168 -3874128 + (GA)n Simple_repeat Simple_repeat 2 68 0 5 1826 1306 114 217 75 chrX 162776168 162776375 -3873921 - RMER17C LTR ERVK -199 211 1 5 1826 957 294 91 34 chrX 162777092 162777500 -3872796 + MLT1C LTR MaLR 34 464 -3 5 1826 417 39 0 0 chrX 162778297 162778348 -3871948 + (TTTG)n Simple_repeat Simple_repeat 1 51 0 5 1826 453 238 0 0 chrX 162778608 162778688 -3871608 - ID4_ SINE ID -1 82 3 5 1826 1332 164 0 28 chrX 162778719 162778933 -3871363 - B3 SINE B2 -7 209 2 5 1826 501 280 126 0 chrX 162779178 162779321 -3870975 - RSINE1 SINE B4 -2 163 3 5 1826 320 275 11 21 chrX 162779350 162779443 -3870853 - B1F SINE Alu -11 138 47 5 1826 242 318 82 0 chrX 162780564 162780649 -3869647 - RSINE1 SINE B4 -43 122 31 5 1826 441 0 0 0 chrX 162780774 162780823 -3869473 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1826 455 122 0 11 chrX 162781224 162781315 -3868981 + (TG)n Simple_repeat Simple_repeat 1 90 0 5 1826 548 264 0 16 chrX 162781315 162781438 -3868858 - RSINE1 SINE B4 -43 122 2 5 1826 904 108 17 11 chrX 162782433 162782610 -3867686 + (GA)n Simple_repeat Simple_repeat 1 178 0 5 1826 238 180 20 0 chrX 162784186 162784236 -3866060 - L1MB4 LINE L1 -34 6146 6096 5 1826 180 0 0 0 chrX 162784522 162784542 -3865754 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1826 701 183 7 0 chrX 162785293 162785446 -3864850 + CT-rich Low_complexity Low_complexity 1 154 0 5 1826 333 0 0 0 chrX 162787000 162787037 -3863259 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 5 1826 330 291 140 14 chrX 162787796 162787939 -3862357 - MER58A DNA MER1_type -13 211 51 5 1826 418 213 10 8 chrX 162788741 162788851 -3861445 + B3A SINE B2 2 112 -83 5 1826 237 119 0 0 chrX 162788864 162788906 -3861390 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1826 248 258 106 0 chrX 162789284 162789350 -3860946 + ID4_ SINE ID 2 74 -9 5 1826 216 0 0 0 chrX 162789613 162789637 -3860659 + (GTTTG)n Simple_repeat Simple_repeat 1 24 0 5 1826 258 282 25 25 chrX 162790226 162790306 -3859990 - ID4_ SINE ID 0 83 4 5 1827 819 291 75 36 chrX 162792512 162792793 -3857503 + B4A SINE B4 1 292 0 5 1827 2133 174 148 28 chrX 162793015 162793442 -3856854 - RLTR28B LTR ERVL -3 478 1 5 1827 234 0 0 0 chrX 162793457 162793483 -3856813 + (CTG)n Simple_repeat Simple_repeat 1 26 0 5 1827 186 43 0 0 chrX 162793483 162793506 -3856790 + (TGG)n Simple_repeat Simple_repeat 3 25 0 5 1827 540 235 17 8 chrX 162793569 162793689 -3856607 - ID_B1 SINE B4 -102 122 2 5 1827 897 330 9 3 chrX 162793818 162794165 -3856131 + L1MB7 LINE L1 5777 6125 -59 5 1827 296 252 137 10 chrX 162794177 162794288 -3856008 + PB1D9 SINE Alu 1 119 -1 5 1827 427 284 0 0 chrX 162794471 162794559 -3855737 + RSINE1 SINE B4 2 89 -76 5 1827 229 316 10 59 chrX 162794559 162794572 -3855724 + B2_Mm2 SINE B2 1 96 -99 6 1827 495 107 0 0 chrX 162794573 162794648 -3855648 + (TG)n Simple_repeat Simple_repeat 1 75 0 6 1827 21 36 0 0 chrX 162794667 162794695 -3855601 + AT_rich Low_complexity Low_complexity 1 28 0 6 1827 25 0 0 0 chrX 162795683 162795708 -3854588 + GC_rich Low_complexity Low_complexity 1 25 0 6 1827 317 209 244 0 chrX 162795956 162796042 -3854254 - ID_B1 SINE B4 -13 211 105 6 1827 480 153 0 56 chrX 162796068 162796158 -3854138 - PB1D9 SINE Alu -3 117 33 6 1827 427 194 0 75 chrX 162797494 162797572 -3852724 - MTE2a LTR MaLR -20 359 289 6 1827 1373 160 0 22 chrX 162797572 162797802 -3852494 + URR1B DNA MER1_type 1 225 0 6 1827 427 194 0 75 chrX 162797802 162797829 -3852467 - MTE2a LTR MaLR -91 288 262 6 1827 728 156 78 0 chrX 162797851 162797979 -3852317 + URR1B DNA MER1_type 1 138 -87 6 1827 941 252 34 4 chrX 162797970 162798209 -3852087 - MTE2a LTR MaLR -132 247 2 6 1827 412 254 45 34 chrX 162799997 162800176 -3850120 - Charlie1a DNA MER1_type -152 1303 1123 6 1827 377 281 56 79 chrX 162800261 162800439 -3849857 - Charlie1a DNA MER1_type -322 1133 960 6 1827 573 170 28 0 chrX 162800474 162800580 -3849716 - RSINE1 SINE B4 -40 125 17 6 1827 1678 280 97 78 chrX 162800591 162801486 -3848810 - Charlie1a DNA MER1_type -514 941 30 6 1827 186 103 0 0 chrX 162801602 162801631 -3848665 + (G)n Simple_repeat Simple_repeat 1 29 0 6 1827 384 22 0 0 chrX 162801650 162801695 -3848601 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1827 985 250 87 4 chrX 162801696 162801949 -3848347 - B4 SINE B4 -18 274 1 6 1827 556 247 123 5 chrX 162802012 162802199 -3848097 - MER58B DNA MER1_type -14 327 119 6 1827 181 273 0 0 chrX 162802391 162802435 -3847861 - MER5A DNA MER1_type -3 186 143 6 1827 3172 44 5 5 chrX 162802465 162802854 -3847442 - L1Md_F3 LINE L1 0 6584 6196 6 1827 533 311 43 6 chrX 162803034 162803196 -3847100 + B3A SINE B2 1 168 -30 6 1827 273 29 0 0 chrX 162803200 162803234 -3847062 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1827 278 250 0 0 chrX 162803358 162803426 -3846870 - MER20 DNA MER1_type -150 69 2 6 1827 806 265 14 0 chrX 162803454 162803665 -3846631 - MER20 DNA MER1_type 0 219 6 6 1827 351 261 0 43 chrX 162805316 162805408 -3844888 - PB1D10 SINE Alu -29 88 1 6 1827 1238 242 73 26 chrX 162805613 162806037 -3844259 - RMER5 LTR ERV1 -45 489 46 6 1827 599 235 38 8 chrX 162806079 162806212 -3844084 - B1_Mur2 SINE Alu -11 138 2 6 1827 234 224 119 17 chrX 162806612 162806671 -3843625 + L2b LINE L2 3289 3353 -22 6 1827 276 253 0 112 chrX 162806946 162807044 -3843252 - L1MEc LINE L1 -6272 128 42 6 1827 573 295 9 78 chrX 162808122 162808339 -3841957 - RMER30 DNA MER1_type 0 202 1 6 1827 411 278 116 17 chrX 162808569 162808741 -3841555 + MER3 DNA MER1_type 21 209 0 6 1827 525 16 0 0 chrX 162808854 162808916 -3841380 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 1827 628 185 325 24 chrX 162809720 162809886 -3840410 + B3 SINE B2 1 216 0 6 1827 186 43 0 0 chrX 162810814 162810837 -3839459 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1827 605 258 67 36 chrX 162810918 162811083 -3839213 + ID_B1 SINE B4 2 171 -53 6 1827 362 265 20 10 chrX 162811825 162811924 -3838372 - PB1D7 SINE Alu -17 103 4 6 1827 596 304 25 6 chrX 162812053 162812212 -3838084 + ID_B1 SINE B4 3 164 -60 6 1827 1712 199 70 21 chrX 162812233 162812660 -3837636 - RMER5 LTR ERV1 -55 479 32 6 1827 684 83 0 0 chrX 162812697 162812793 -3837503 + (GAAA)n Simple_repeat Simple_repeat 1 96 0 6 1827 343 314 66 8 chrX 162812876 162812998 -3837298 + MER5B DNA MER1_type 37 165 -13 6 1827 184 355 137 7 chrX 162813173 162813326 -3836970 + MIRm SINE MIR 3 175 -101 6 1827 213 273 0 0 chrX 162814020 162814064 -3836232 - ID4 SINE ID -7 76 33 6 1827 299 325 23 38 chrX 162815830 162815961 -3834335 - B1_Mur1 SINE Alu -20 129 1 6 1827 652 275 46 12 chrX 162815961 162816026 -3834270 - B4 SINE B4 -207 85 15 6 1827 24 0 0 0 chrX 162816037 162816061 -3834235 + AT_rich Low_complexity Low_complexity 1 24 0 6 1827 333 258 120 30 chrX 162816103 162816203 -3834093 - RSINE1 SINE B4 -26 139 31 6 1827 245 271 0 0 chrX 162817268 162817316 -3832980 + ID4 SINE ID 26 73 -10 6 1827 764 269 25 33 chrX 162817446 162817688 -3832608 + B4 SINE B4 49 288 -4 6 1827 300 234 191 27 chrX 162818467 162818577 -3831719 - B1F SINE Alu -21 128 1 6 1827 216 271 146 41 chrX 162818473 162818596 -3831700 - ID_B1 SINE B4 -24 200 65 6 1827 207 204 0 0 chrX 162819482 162819531 -3830765 + CT-rich Low_complexity Low_complexity 4 52 0 6 1827 201 74 0 0 chrX 162819762 162819789 -3830507 + (CAA)n Simple_repeat Simple_repeat 2 28 0 6 1827 579 212 52 29 chrX 162819835 162819966 -3830330 + B1_Mur1 SINE Alu 2 136 -13 6 1827 252 0 0 0 chrX 162819966 162819994 -3830302 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 6 1827 889 178 7 0 chrX 162820826 162820972 -3829324 + B1_Mur3 SINE Alu 2 148 -1 6 1827 805 240 5 63 chrX 162820995 162821217 -3829079 + B3 SINE B2 8 216 0 6 1827 410 315 56 0 chrX 162821579 162821741 -3828555 - MER5B DNA MER1_type 0 178 8 6 1827 368 291 81 0 chrX 162822415 162822563 -3827733 + MER82 DNA MER2_type 164 323 -330 6 1827 423 317 125 5 chrX 162822584 162822784 -3827512 + MER82 DNA MER2_type 429 652 -1 6 1827 288 0 0 0 chrX 162827744 162827776 -3822520 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1827 736 183 0 72 chrX 162827797 162827950 -3822346 + B1_Mur4 SINE Alu 9 150 0 6 1827 34 0 0 0 chrX 162827972 162828006 -3822290 + AT_rich Low_complexity Low_complexity 1 34 0 6 1827 401 286 293 47 chrX 162828096 162828389 -3821907 - MLT1A1 LTR MaLR -18 390 26 6 1827 524 144 144 0 chrX 162828673 162828777 -3821519 + PB1D9 SINE Alu 2 120 0 6 1827 1087 126 157 0 chrX 162829043 162829234 -3821062 + URR1B DNA MER1_type 5 225 0 6 1827 619 259 82 14 chrX 162829367 162829575 -3820721 - ID_B1 SINE B4 -1 223 2 6 1827 414 260 42 0 chrX 162829590 162829686 -3820610 - PB1D10 SINE Alu -8 109 10 6 1827 1001 237 29 0 chrX 162831814 162832021 -3818275 - B3 SINE B2 -3 213 1 6 1827 198 103 0 0 chrX 162832406 162832435 -3817861 + (A)n Simple_repeat Simple_repeat 1 29 0 6 1827 227 280 64 11 chrX 162832929 162833023 -3817273 + GA-rich Low_complexity Low_complexity 3 101 0 6 1827 230 327 69 0 chrX 162833401 162833502 -3816794 + L2a LINE L2 3315 3422 -4 6 1827 3171 58 2 8 chrX 162833663 162834061 -3816235 - MTA_Mm LTR MaLR 0 396 1 6 1827 13861 80 49 7 chrX 162835030 162837904 -3812392 - L1VL2 LINE L1 -603 3012 3 6 1827 1063 162 65 0 chrX 162837906 162838166 -3812130 - L1VL2 LINE L1 -5835 500 118 6 1827 280 105 0 0 chrX 162838455 162838493 -3811803 + RSINE1 SINE B4 92 129 -36 6 1827 772 264 0 27 chrX 162838536 162838723 -3811573 + B3A SINE B2 1 182 -16 6 1827 27 29 0 0 chrX 162838725 162838759 -3811537 + AT_rich Low_complexity Low_complexity 1 34 0 6 1827 391 299 57 98 chrX 162839309 162839500 -3810796 + Lx8 LINE L1 7189 7364 -109 6 1827 1546 32 16 16 chrX 162839500 162839692 -3810604 + B2_Mm1a SINE B2 1 192 -1 6 1827 391 299 57 98 chrX 162839692 162839797 -3810499 + Lx8 LINE L1 7365 7473 0 6 1827 743 233 119 26 chrX 162840049 162840243 -3810053 - B4A SINE B4 -8 284 73 6 1827 647 298 6 0 chrX 162840561 162840719 -3809577 + RSINE1 SINE B4 1 159 -6 6 1827 803 217 58 48 chrX 162840899 162841107 -3809189 + B3 SINE B2 1 210 -6 6 1827 667 272 76 98 chrX 162841134 162841411 -3808885 + B4 SINE B4 6 276 -16 6 1827 277 310 0 0 chrX 162841387 162841445 -3808851 + RSINE1 SINE B4 108 165 0 6 1827 328 257 155 36 chrX 162841668 162841779 -3808517 - B1F2 SINE Alu 0 147 24 6 1827 1027 177 11 0 chrX 162841850 162842025 -3808271 + B3 SINE B2 31 207 -9 6 1827 411 235 65 32 chrX 162842440 162842563 -3807733 + PB1 SINE Alu 1 127 0 6 1827 865 161 14 0 chrX 162842877 162843020 -3807276 - B1_Mus2 SINE Alu -1 146 2 6 1827 32 43 0 0 chrX 162845320 162845366 -3804930 + AT_rich Low_complexity Low_complexity 1 46 0 6 1827 839 203 0 0 chrX 162845397 162845545 -3804751 + B1_Mur2 SINE Alu 1 148 -1 6 1827 1654 261 140 21 chrX 162845545 162846225 -3804071 + Lx8 LINE L1 6712 7472 -1 6 1827 1058 48 13 88 chrX 162846770 162846929 -3803367 + B1_Mus2 SINE Alu 1 147 0 6 1827 476 184 122 0 chrX 162846985 162847083 -3803213 - PB1D9 SINE Alu 0 120 11 6 1827 809 222 62 38 chrX 162849448 162849659 -3800637 + B3 SINE B2 1 216 0 6 1827 1378 120 39 0 chrX 162850536 162850744 -3799552 + B3 SINE B2 1 216 0 6 1827 515 324 27 14 chrX 162850767 162850914 -3799382 + RSINE1 SINE B4 3 151 -14 6 1827 870 155 35 0 chrX 162850999 162851141 -3799155 + B1_Mus1 SINE Alu 2 148 0 6 1827 352 362 0 0 chrX 162852022 162852116 -3798180 + PB1D10 SINE Alu 3 96 -21 6 1827 956 96 0 0 chrX 162852411 162852547 -3797749 + L1_Mus2 LINE L1 6431 6566 0 6 1827 531 208 102 55 chrX 162853269 162853396 -3796900 + RSINE1 SINE B4 32 164 -1 6 1827 1191 88 53 32 chrX 162853418 162853607 -3796689 - B2_Mm2 SINE B2 -2 193 1 6 1827 387 0 0 0 chrX 162853622 162853665 -3796631 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1827 483 257 57 9 chrX 162853679 162853785 -3796511 + B1F1 SINE Alu 8 118 -31 6 1827 218 225 38 0 chrX 162853785 162853807 -3796489 + A-rich Low_complexity Low_complexity 3 25 0 6 1827 180 0 0 0 chrX 162853807 162853827 -3796469 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 6 1827 218 225 38 0 chrX 162853827 162853884 -3796412 + A-rich Low_complexity Low_complexity 26 84 0 7 1827 269 250 0 14 chrX 162854067 162854136 -3796160 + GA-rich Low_complexity Low_complexity 3 70 0 7 1827 36297 13 2 7 chrX 162854410 162859652 -3790644 + L1Md_A LINE L1 378 5586 -297 7 1827 8780 17 0 0 chrX 162859652 162860648 -3789648 + L1Md_A LINE L1 5587 6582 0 7 1827 978 52 7 29 chrX 162860656 162860796 -3789500 - Lx LINE L1 -768 5886 5750 7 1827 2912 54 36 3 chrX 162860796 162861183 -3789113 + L1_Mus3 LINE L1 6233 6632 -6 7 1827 1357 84 21 10 chrX 162861260 162861452 -3788844 + B2_Mm2 SINE B2 2 195 0 7 1827 1283 34 0 0 chrX 162861457 162861604 -3788692 + B1_Mus1 SINE Alu 2 148 0 7 1827 204 111 0 0 chrX 162861606 162861642 -3788654 + (A)n Simple_repeat Simple_repeat 1 36 0 7 1827 563 213 0 9 chrX 162862273 162862382 -3787914 - B1F SINE Alu -35 114 7 7 1827 279 219 0 15 chrX 162862384 162862449 -3787847 - PB1D10 SINE Alu -53 64 1 7 1827 296 192 0 29 chrX 162862392 162862458 -3787838 - ID_B1 SINE B4 -87 137 78 7 1827 702 250 118 28 chrX 162862458 162862713 -3787583 + B4A SINE B4 5 282 -10 7 1827 189 296 18 18 chrX 162863486 162863541 -3786755 - L2b LINE L2 -92 3334 3240 7 1827 290 210 260 28 chrX 162865322 162865503 -3784793 + L1ME2z LINE L1 6221 6443 -1 7 1827 231 375 55 24 chrX 162865579 162865746 -3784550 - MIR3 SINE MIR -80 188 14 7 1827 336 48 0 0 chrX 162865825 162865867 -3784429 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 1827 1137 207 108 16 chrX 162865870 162866177 -3784119 + ORR1C1 LTR MaLR 27 378 0 7 1827 547 250 24 24 chrX 162866260 162866387 -3783909 + B1F2 SINE Alu 7 133 -16 7 1827 357 289 86 39 chrX 162866811 162866858 -3783438 + L1M5 LINE L1 5264 5310 -814 7 1827 1517 62 5 0 chrX 162866858 162867050 -3783246 + B2_Mm1a SINE B2 1 193 0 7 1827 357 289 86 39 chrX 162867050 162867236 -3783060 + L1M5 LINE L1 5311 5508 -616 7 1827 1148 62 0 20 chrX 162867409 162867558 -3782738 + B1_Mus2 SINE Alu 2 147 0 7 1827 501 250 0 0 chrX 162867772 162867872 -3782424 - RSINE1 SINE B4 -60 105 6 7 1827 227 270 32 0 chrX 162867896 162867959 -3782337 - L1MC3 LINE L1 -1309 6476 6412 7 1827 280 200 0 0 chrX 162868081 162868141 -3782155 - L1MC3 LINE L1 -1567 6218 6159 7 1827 294 239 238 7 chrX 162868468 162868611 -3781685 - MER3 DNA MER1_type -2 207 32 7 1827 318 283 100 0 chrX 162868666 162868786 -3781510 - L1MD3 LINE L1 -939 7056 6925 7 1827 1883 145 24 78 chrX 162869847 162870221 -3780075 + ORR1B1 LTR MaLR 41 394 0 7 1827 545 329 0 47 chrX 162870411 162870580 -3779716 - RSINE1 SINE B4 -1 164 4 7 1827 284 305 133 0 chrX 162871078 162871183 -3779113 - ID_B1 SINE B4 -25 199 81 7 1827 512 260 85 0 chrX 162871330 162871530 -3778766 + L1MC1 LINE L1 6110 6326 -7 7 1827 1172 61 121 0 chrX 162871550 162871715 -3778581 + ORR1A1 LTR MaLR 1 185 -161 7 1827 4503 28 0 4 chrX 162871710 162872258 -3778038 + ORR1A1-int LTR MaLR 1247 1792 0 7 1827 2870 43 3 0 chrX 162872258 162872603 -3777693 + ORR1A1 LTR MaLR 1 346 0 7 1827 821 159 0 46 chrX 162873859 162874011 -3776285 - B1_Mus2 SINE Alu -2 145 1 7 1827 380 274 23 38 chrX 162874092 162874225 -3776071 + RSINE1 SINE B4 3 133 -32 7 1827 251 338 15 23 chrX 162874666 162874799 -3775497 - RMER15 LTR ERVL -72 503 372 7 1827 1144 238 30 15 chrX 162875515 162875784 -3774512 + B4A SINE B4 3 275 -17 7 1827 599 235 223 5 chrX 162875839 162876023 -3774273 + ID_B1 SINE B4 1 224 0 7 1827 290 355 39 34 chrX 162876026 162876204 -3774092 + B3A SINE B2 20 198 0 7 1827 291 292 139 2 chrX 162876366 162876486 -3773810 + PB1D7 SINE Alu 1 131 -18 7 1827 231 296 79 30 chrX 162876655 162876756 -3773540 + LTR65 LTR ERV1 1 106 -563 7 1827 538 209 54 0 chrX 162877500 162877629 -3772667 - B1_Mur1 SINE Alu -11 138 3 7 1827 21 89 0 0 chrX 162878531 162878587 -3771709 + GC_rich Low_complexity Low_complexity 1 56 0 7 1827 381 335 172 5 chrX 162879004 162879190 -3771106 - MER20 DNA MER1_type 0 219 3 7 1827 288 0 0 0 chrX 162880104 162880136 -3770160 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 1827 904 215 13 0 chrX 162880138 162880296 -3770000 - B3A SINE B2 -38 160 1 7 1827 452 274 26 0 chrX 162880458 162880575 -3769721 - PB1D7 SINE Alu 0 120 1 7 1827 454 297 14 14 chrX 162880692 162880832 -3769464 - B1_Mur2 SINE Alu -8 141 2 7 1827 556 196 0 18 chrX 162880934 162881048 -3769248 + PB1D10 SINE Alu 3 114 -3 7 1827 270 270 0 51 chrX 162882146 162882224 -3768072 - MER3 DNA MER1_type -131 78 5 7 1827 402 288 18 18 chrX 162882946 162883059 -3767237 - MER58B DNA MER1_type -12 329 217 7 1827 370 288 113 72 chrX 162883424 162883645 -3766651 - MIRb SINE MIR -8 260 31 7 1827 382 303 0 20 chrX 162883701 162883802 -3766494 + RSINE1 SINE B4 2 100 -65 7 1827 344 22 22 0 chrX 162883838 162883883 -3766413 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1827 700 211 20 27 chrX 162883947 162884093 -3766203 - B1_Mur2 SINE Alu -1 148 4 7 1827 1155 36 50 0 chrX 162884873 162885012 -3765284 - B1_Mus1 SINE Alu 0 148 3 7 1827 1332 79 0 55 chrX 162885042 162885243 -3765053 - B2_Mm2 SINE B2 -4 191 2 7 1827 324 338 42 28 chrX 162886015 162886158 -3764138 - MLT1C LTR MaLR -10 380 236 7 1827 468 272 16 16 chrX 162886220 162886347 -3763949 - B1F SINE Alu -16 133 7 7 1827 473 213 74 59 chrX 162886357 162886492 -3763804 - MLT1C LTR MaLR -288 179 43 7 1827 517 273 75 49 chrX 162886443 162886709 -3763587 + CYRA11_Mm Unknown Y-chromosome 115 387 -230 7 1827 1189 171 18 9 chrX 162886504 162886722 -3763574 - URR1B DNA MER1_type -5 220 1 7 1827 460 257 29 0 chrX 162887513 162887618 -3762678 + PB1D10 SINE Alu 1 108 -9 7 1827 564 222 113 7 chrX 162887881 162888090 -3762206 - MTD LTR MaLR -5 414 134 7 1827 871 76 159 0 chrX 162888170 162888302 -3761994 + B2_Mm2 SINE B2 1 153 -42 7 1827 278 0 0 51 chrX 162888302 162888341 -3761955 + (CATA)n Simple_repeat Simple_repeat 4 40 0 7 1827 235 210 247 0 chrX 162888865 162888946 -3761350 + B1F1 SINE Alu 5 105 -44 7 1827 362 339 16 8 chrX 162889188 162889316 -3760980 + ID_B1 SINE B4 82 210 -14 7 1827 374 287 98 0 chrX 162889323 162889445 -3760851 + B1F SINE Alu 4 137 -12 7 1827 284 229 57 0 chrX 162889565 162889635 -3760661 - RSINE1 SINE B4 -51 114 41 7 1827 439 250 56 0 chrX 162889656 162889764 -3760532 - ID_B1 SINE B4 -6 218 105 7 1827 24 32 0 0 chrX 162891037 162891068 -3759228 + AT_rich Low_complexity Low_complexity 1 31 0 7 1827 395 245 139 76 chrX 162891230 162891402 -3758894 + B3A SINE B2 1 183 -15 7 1827 334 262 90 83 chrX 162892089 162892222 -3758074 - RSINE1 SINE B4 -15 150 17 7 1827 758 204 0 0 chrX 162892226 162892358 -3757938 - B1_Mus1 SINE Alu -15 133 2 7 1827 1066 111 43 37 chrX 162892361 162892548 -3757748 - B2_Mm2 SINE B2 -6 189 2 7 1827 217 188 21 0 chrX 162893265 162893313 -3756983 + (CAAA)n Simple_repeat Simple_repeat 4 52 0 7 1827 426 263 167 40 chrX 162893802 162894008 -3756288 + MTE2a LTR MaLR 4 194 -185 7 1827 1022 163 256 24 chrX 162894268 162894557 -3755739 + MTC LTR MaLR 20 375 -46 7 1827 330 45 0 0 chrX 162894826 162894870 -3755426 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 7 1827 840 78 0 0 chrX 162894886 162895001 -3755295 - B1_Mus2 SINE Alu -32 115 1 7 1827 189 0 0 0 chrX 162896279 162896300 -3753996 + (TAAAAA)n Simple_repeat Simple_repeat 4 24 0 7 1827 288 70 0 0 chrX 162896674 162896717 -3753579 + (TC)n Simple_repeat Simple_repeat 2 44 0 7 1827 504 259 160 6 chrX 162896756 162896931 -3753365 - B4A SINE B4 -84 208 7 7 1827 243 301 193 0 chrX 162897363 162897446 -3752850 + MER3 DNA MER1_type 1 99 -110 7 1827 298 312 0 12 chrX 162897892 162897973 -3752323 + ID_B1 SINE B4 78 157 -67 7 1827 1223 195 87 74 chrX 162898337 162898518 -3751778 + RMER15 LTR ERVL 27 224 -351 7 1827 1086 177 51 0 chrX 162898518 162898733 -3751563 + URR1A DNA MER1_type 1 226 0 7 1827 1223 195 87 74 chrX 162898733 162898853 -3751443 + RMER15 LTR ERVL 225 329 -246 7 1827 1044 39 0 44 chrX 162898853 162898988 -3751308 - B1_Mus1 SINE Alu -19 129 1 7 1827 1223 195 87 74 chrX 162898988 162899051 -3751245 + RMER15 LTR ERVL 330 397 -178 7 1827 378 0 0 0 chrX 162899051 162899093 -3751203 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1827 446 257 0 60 chrX 162899870 162899986 -3750310 - B3A SINE B2 -30 168 60 7 1827 296 197 73 29 chrX 162900337 162900405 -3749891 - ID4_ SINE ID -11 72 2 7 1827 498 248 8 16 chrX 162900420 162900543 -3749753 - ID_B1 SINE B4 -8 216 95 7 1827 1052 95 20 0 chrX 162901343 162901490 -3748806 - B1_Mur4 SINE Alu 0 150 1 7 1827 460 277 15 80 chrX 162901510 162901710 -3748586 - B3A SINE B2 -8 190 4 7 1827 1785 138 71 44 chrX 162901900 162902264 -3748032 + ORR1D1 LTR MaLR 1 374 0 7 1827 323 130 0 0 chrX 162902273 162902319 -3747977 + B1_Mus1 SINE Alu 2 47 -101 7 1827 244 376 12 12 chrX 162902638 162902724 -3747572 - PB1D10 SINE Alu -31 86 1 7 1827 1216 61 0 0 chrX 162902742 162902889 -3747407 - B1_Mus2 SINE Alu 0 147 1 7 1827 360 155 127 0 chrX 162902899 162902970 -3747326 - ID4 SINE ID -1 82 3 7 1827 2613 27 0 0 chrX 162902993 162903287 -3747009 + L1Md_F2 LINE L1 5293 5586 -297 7 1827 8450 36 0 2 chrX 162903287 162904273 -3746023 + L1Md_F2 LINE L1 5587 6570 -12 7 1827 192 291 36 48 chrX 162905065 162905148 -3745148 - L2 LINE L2 -508 2911 2830 7 1827 431 152 109 12 chrX 162905664 162905769 -3744527 - PB1D9 SINE Alu -3 117 2 7 1827 212 192 0 88 chrX 162905838 162905895 -3744401 + B3 SINE B2 1 52 -164 7 1827 1136 187 123 153 chrX 162906168 162906592 -3743704 + MTD LTR MaLR 1 411 -8 7 1827 225 250 45 127 chrX 162907111 162907221 -3743075 + MT2B LTR ERVL 141 241 -360 8 1827 400 250 0 22 chrX 162907147 162907237 -3743059 + PB1D10 SINE Alu 11 98 -19 8 1827 235 250 15 22 chrX 162907251 162907386 -3742910 + GA-rich Low_complexity Low_complexity 1 134 0 8 1827 423 218 6 44 chrX 162907414 162907596 -3742700 + GA-rich Low_complexity Low_complexity 5 179 0 8 1827 325 229 150 17 chrX 162908049 162908169 -3742127 + MER3 DNA MER1_type 74 209 0 7 1827 210 37 0 0 chrX 162908321 162908348 -3741948 + (TGGA)n Simple_repeat Simple_repeat 4 30 0 8 1827 781 222 56 60 chrX 162908396 162908612 -3741684 - B4 SINE B4 -77 215 1 8 1827 589 224 25 81 chrX 162908804 162908964 -3741332 - Lx8 LINE L1 -236 7237 7087 8 1827 576 107 103 35 chrX 162908997 162909113 -3741183 - B1_Mus2 SINE Alu -6 141 18 8 1827 411 228 147 17 chrX 162909159 162909275 -3741021 + B1_Mur2 SINE Alu 1 131 -18 8 1827 26 0 0 0 chrX 162909282 162909308 -3740988 + AT_rich Low_complexity Low_complexity 1 26 0 8 1827 574 203 55 7 chrX 162909592 162909722 -3740574 - B1_Mur1 SINE Alu -5 144 13 8 1827 663 269 178 33 chrX 162911050 162911265 -3739031 - MTEb LTR MaLR 0 379 139 8 1827 267 31 0 0 chrX 162911265 162911297 -3738999 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 8 1827 663 269 178 33 chrX 162911297 162911412 -3738884 - MTEb LTR MaLR -241 138 2 8 1827 210 37 0 0 chrX 162911565 162911592 -3738704 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 8 1827 381 174 246 87 chrX 162911665 162911791 -3738505 + B1_Mur3 SINE Alu 2 147 -2 8 1827 324 293 135 0 chrX 162912267 162912400 -3737896 + MER119 DNA MER1_type 64 214 -369 8 1827 549 297 78 50 chrX 162913895 162914178 -3736118 + B4A SINE B4 2 292 0 8 1827 217 139 0 0 chrX 162914383 162914419 -3735877 + B3 SINE B2 3 38 -178 8 1827 21 36 0 0 chrX 162914492 162914520 -3735776 + AT_rich Low_complexity Low_complexity 1 28 0 8 1827 807 164 14 14 chrX 162914525 162914673 -3735623 + B1_Mur4 SINE Alu 3 150 0 8 1827 263 214 0 91 chrX 162915345 162915422 -3734874 - MER20 DNA MER1_type -148 71 2 8 1827 192 333 0 44 chrX 162915444 162915535 -3734761 + MIR SINE MIR 52 138 -124 8 1827 1325 93 11 16 chrX 162916072 162916258 -3734038 + B2_Mm1t SINE B2 2 186 -7 8 1827 215 105 53 0 chrX 162916274 162916312 -3733984 + A-rich Low_complexity Low_complexity 2 41 0 8 1827 204 238 0 0 chrX 162917176 162917218 -3733078 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 1827 21 0 0 0 chrX 162917366 162917387 -3732909 + GC_rich Low_complexity Low_complexity 1 21 0 8 1827 22 0 0 0 chrX 162917608 162917630 -3732666 + GC_rich Low_complexity Low_complexity 1 22 0 8 1827 1138 69 0 20 chrX 162918106 162918254 -3732042 + B1_Mus1 SINE Alu 4 148 0 8 1827 254 255 163 0 chrX 162918781 162918879 -3731417 + ID_B1 SINE B4 108 221 -3 8 1827 25 65 0 0 chrX 162919008 162919054 -3731242 + AT_rich Low_complexity Low_complexity 1 46 0 8 1827 673 183 30 38 chrX 162919092 162919208 -3731088 + B1_Mur3 SINE Alu 1 118 -31 8 1827 315 0 0 0 chrX 162919208 162919243 -3731053 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 1827 673 183 30 38 chrX 162919243 162919257 -3731039 + B1_Mur3 SINE Alu 119 130 -19 8 1827 656 207 138 0 chrX 162919300 162919488 -3730808 - Lx7 LINE L1 0 7696 7483 8 1827 319 80 0 20 chrX 162919477 162919528 -3730768 + Lx LINE L1 6329 6378 -276 8 1827 959 143 0 26 chrX 162919565 162919716 -3730580 - B1_Mus1 SINE Alu -1 147 1 8 1827 948 236 9 14 chrX 162922199 162922422 -3727874 - ID_B1 SINE B4 -1 223 2 8 228 322 280 0 0 chrX 162922463 162922538 -3727758 - MLT1I LTR MaLR -233 178 104 8 1828 764 162 27 34 chrX 162922808 162922955 -3727341 + B1_Mur1 SINE Alu 4 149 0 8 1828 574 208 88 0 chrX 162923064 162923189 -3727107 + B1_Mur2 SINE Alu 1 136 -13 8 1828 322 76 19 0 chrX 162923306 162923365 -3726931 + B1_Mur4 SINE Alu 59 148 -2 8 1828 420 71 0 0 chrX 162925299 162925355 -3724941 + (TA)n Simple_repeat Simple_repeat 2 57 0 8 1828 479 114 101 0 chrX 162925466 162925545 -3724751 - B1_Mur1 SINE Alu 0 149 63 8 1828 1152 56 7 7 chrX 162925659 162925804 -3724492 + B1_Mus2 SINE Alu 2 146 -1 8 1828 817 259 10 5 chrX 162926191 162926397 -3723899 + ID_B1 SINE B4 2 208 -16 8 1828 189 74 0 0 chrX 162926829 162926856 -3723440 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 1828 528 149 9 38 chrX 162926856 162926953 -3723343 - B1_Mur4 SINE Alu -7 143 50 8 1828 379 264 107 0 chrX 162926954 162927075 -3723221 - ID_B1 SINE B4 -11 213 80 8 1828 1102 96 0 6 chrX 162927167 162927325 -3722971 + B2_Mm2 SINE B2 2 158 -37 8 1828 411 21 0 0 chrX 162927325 162927373 -3722923 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 8 1828 284 64 0 21 chrX 162927658 162927706 -3722590 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 8 1828 1165 29 0 7 chrX 162927706 162927845 -3722451 - B1_Mus1 SINE Alu -9 139 2 8 1828 408 263 76 127 chrX 162928148 162928462 -3721834 - L2 LINE L2 -338 3081 2784 8 1828 878 137 13 13 chrX 162928478 162928633 -3721663 + RLTR14 LTR ERV1 14 168 -214 8 1828 387 0 0 0 chrX 162928633 162928676 -3721620 + (T)n Simple_repeat Simple_repeat 1 43 0 8 1828 1110 191 19 0 chrX 162928693 162928902 -3721394 + RLTR14 LTR ERV1 170 382 0 8 1828 224 271 85 0 chrX 162929045 162929104 -3721192 - ID4_ SINE ID -5 78 15 8 1828 405 0 0 0 chrX 162929115 162929160 -3721136 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 1828 2507 151 15 40 chrX 162929160 162929640 -3720656 + RMER13B LTR ERVK 5 596 -310 8 1828 2097 130 18 16 chrX 162929666 162930023 -3720273 + ORR1A2 LTR MaLR 1 347 -12 8 1828 338 242 91 0 chrX 162930027 162930126 -3720170 - ID_B1 SINE B4 -31 193 86 8 1828 344 263 177 59 chrX 162930162 162930194 -3720102 - B3 SINE B2 0 216 190 8 1828 369 0 0 0 chrX 162930194 162930235 -3720061 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 1828 373 261 208 41 chrX 162930235 162930369 -3719927 - B3A SINE B2 -27 189 24 8 1828 512 215 128 23 chrX 162930369 162930380 -3719916 - B1_Mur2 SINE Alu -2 147 138 8 1828 978 93 0 0 chrX 162930380 162930519 -3719777 + (CCTTG)n Simple_repeat Simple_repeat 1 139 0 8 1828 512 215 128 23 chrX 162930519 162930640 -3719656 - B1_Mur2 SINE Alu -12 137 2 8 1828 373 261 209 40 chrX 162930640 162930658 -3719638 - B3A SINE B2 -174 24 9 8 1828 467 338 156 19 chrX 162930694 162931116 -3719180 - L2 LINE L2 -797 2622 2143 8 1828 313 213 108 27 chrX 162931178 162931289 -3719007 + B1F SINE Alu 15 134 -15 8 1828 477 0 0 0 chrX 162931293 162931346 -3718950 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 1828 193 272 91 80 chrX 162931347 162931435 -3718861 - L2 LINE L2 -1340 2079 1991 8 1828 743 176 0 53 chrX 162931787 162931937 -3718359 + B1_Mur2 SINE Alu 2 143 -6 8 1828 239 262 152 19 chrX 162932253 162932358 -3717938 - L1MB8 LINE L1 -1 6177 6059 8 1828 1426 60 21 21 chrX 162932377 162932563 -3717733 - B2_Mm2 SINE B2 -8 187 2 8 1828 227 218 53 35 chrX 162932844 162932901 -3717395 - RSINE1 SINE B4 -6 159 102 8 1828 618 51 0 0 chrX 162932905 162932983 -3717313 + (TTTC)n Simple_repeat Simple_repeat 2 79 0 8 1828 815 167 33 33 chrX 162932986 162933166 -3717130 - B2_Mm2 SINE B2 -14 181 2 8 1828 288 0 0 0 chrX 162933309 162933341 -3716955 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 8 1828 191 88 0 29 chrX 162933407 162933442 -3716854 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1828 754 246 17 6 chrX 162933460 162933640 -3716656 - ID_B1 SINE B4 -42 182 1 8 1828 409 247 11 94 chrX 162933650 162933670 -3716626 - ID_B1 SINE B4 -44 248 163 8 1828 724 173 0 28 chrX 162933670 162933813 -3716483 - B1_Mur4 SINE Alu -1 149 11 8 1828 409 247 11 94 chrX 162933813 162933830 -3716466 - ID_B1 SINE B4 -44 162 78 8 1828 1094 138 149 0 chrX 162934257 162934452 -3715844 + URR1B DNA MER1_type 2 225 0 8 1828 1308 109 16 0 chrX 162934653 162934837 -3715459 - B2_Mm2 SINE B2 -8 187 1 8 1828 861 265 4 61 chrX 162934917 162935146 -3715150 + ID_B1 SINE B4 2 217 -7 8 1828 906 151 13 20 chrX 162935187 162935336 -3714960 - B1_Mus1 SINE Alu 0 148 1 8 1828 21 36 0 0 chrX 162935459 162935487 -3714809 + AT_rich Low_complexity Low_complexity 1 28 0 8 1828 180 0 0 0 chrX 162935778 162935798 -3714498 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 1828 306 0 0 0 chrX 162936238 162936272 -3714024 + (TC)n Simple_repeat Simple_repeat 1 34 0 8 1828 1150 75 0 0 chrX 162936272 162936408 -3713888 - B1_Mus1 SINE Alu -11 137 2 8 1828 245 293 61 0 chrX 162936441 162936523 -3713773 + L2 LINE L2 2724 2810 -609 8 1828 280 41 61 0 chrX 162936793 162936842 -3713454 + (CAAAAA)n Simple_repeat Simple_repeat 2 53 0 8 1828 776 168 27 34 chrX 162936850 162936998 -3713298 + B1_Mus1 SINE Alu 2 148 0 8 1828 533 101 69 8 chrX 162937007 162937062 -3713234 + polypurine Low_complexity Low_complexity 2 60 0 8 1828 1037 111 23 3 chrX 162937062 162937414 -3712882 + (GGGAGA)n Simple_repeat Simple_repeat 1 359 0 8 1828 533 101 69 8 chrX 162937414 162937487 -3712809 + polypurine Low_complexity Low_complexity 61 138 0 8 1828 357 292 47 0 chrX 162938285 162938391 -3711905 + PB1D7 SINE Alu 10 120 0 8 1828 285 232 61 40 chrX 162939060 162939159 -3711137 - PB1D7 SINE Alu -7 113 13 8 1828 381 230 58 29 chrX 162939176 162939279 -3711017 - PB1D10 SINE Alu -8 109 4 8 1828 202 264 204 9 chrX 162939294 162939424 -3710872 + MIRb SINE MIR 45 203 -65 8 1828 222 348 25 0 chrX 162939488 162939606 -3710690 - MER5B DNA MER1_type -52 126 6 8 1828 201 190 0 0 chrX 162939976 162939998 -3710298 + A-rich Low_complexity Low_complexity 1 22 0 8 1828 987 51 87 14 chrX 162939998 162940136 -3710160 + B1_Mus1 SINE Alu 1 148 0 8 1828 201 190 0 0 chrX 162940136 162940171 -3710125 + A-rich Low_complexity Low_complexity 23 57 0 8 1828 531 303 0 0 chrX 162941650 162941782 -3708514 + ID_B1 SINE B4 82 213 -11 8 1828 615 177 0 108 chrX 162942241 162942380 -3707916 - B3 SINE B2 0 216 93 8 1828 360 0 0 0 chrX 162942416 162942456 -3707840 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 1828 278 367 8 62 chrX 162942649 162942777 -3707519 + MER5B DNA MER1_type 3 123 -55 9 1828 2326 61 30 32 chrX 162943223 162943562 -3706734 + ORR1A1 LTR MaLR 1 338 -8 9 1828 851 122 0 0 chrX 162944059 162944190 -3706106 + B1_Mur3 SINE Alu 12 142 -7 9 1828 233 70 47 0 chrX 162944199 162944242 -3706054 + (CAAAA)n Simple_repeat Simple_repeat 5 49 0 9 1828 1159 74 0 0 chrX 162944384 162944532 -3705764 + B1_Mus1 SINE Alu 1 148 0 9 1828 345 100 0 0 chrX 162944532 162944582 -3705714 + (GAAA)n Simple_repeat Simple_repeat 3 52 0 9 1828 4117 58 58 0 chrX 162944672 162945194 -3705102 + L1_Mus1 LINE L1 6016 6567 0 9 1828 28 0 0 0 chrX 162945297 162945325 -3704971 + AT_rich Low_complexity Low_complexity 1 28 0 9 1828 506 245 104 7 chrX 162945329 162945473 -3704823 + RSINE1 SINE B4 2 159 -6 9 1828 368 250 11 0 chrX 162945524 162945612 -3704684 + PB1D10 SINE Alu 28 116 -1 9 1828 267 185 0 18 chrX 162945657 162945712 -3704584 - MER58D DNA MER1_type 0 386 333 9 1828 544 254 62 57 chrX 162945777 162945851 -3704445 + B3A SINE B2 1 80 -118 9 1828 4072 114 128 51 chrX 162945851 162946601 -3703695 + RMER17D2 LTR ERVK 1 808 -1 9 1828 544 254 62 57 chrX 162946601 162946718 -3703578 + B3A SINE B2 81 193 -5 9 1828 1253 205 19 19 chrX 162946734 162946993 -3703303 + B4A SINE B4 1 259 -33 9 1828 286 270 0 0 chrX 162947034 162947097 -3703199 + ID SINE ID 1 63 -161 9 1828 303 191 15 31 chrX 162947377 162947442 -3702854 - tRNA-Ala-GCA tRNA tRNA -8 67 4 9 1828 189 147 0 0 chrX 162947623 162947657 -3702639 + (TG)n Simple_repeat Simple_repeat 2 35 0 9 1828 242 225 0 70 chrX 162948719 162948805 -3701491 + 4.5SRNA scRNA scRNA 1 80 -14 9 1828 218 311 86 32 chrX 162948954 162948970 -3701326 + B4 SINE B4 72 92 -200 9 1828 353 297 79 0 chrX 162948970 162949071 -3701225 + PB1D9 SINE Alu 2 110 -10 9 1828 226 315 157 0 chrX 162949433 162949522 -3700774 - MER90a LTR ERV1 -325 289 187 9 1828 385 272 79 22 chrX 162949525 162949664 -3700632 - B1F1 SINE Alu 0 149 3 9 1828 222 62 0 0 chrX 162949679 162949711 -3700585 + (T)n Simple_repeat Simple_repeat 1 32 0 9 1828 1003 218 205 21 chrX 162949796 162950133 -3700163 + MTD LTR MaLR 18 416 -3 9 1828 268 333 127 32 chrX 162950135 162950355 -3699941 - MER31A LTR ERV1 -241 244 4 9 1828 473 274 185 76 chrX 162950375 162950731 -3699565 - MER57D LTR ERV1 -4 407 13 9 1828 456 104 0 0 chrX 162950750 162950817 -3699479 + (TTTC)n Simple_repeat Simple_repeat 4 70 0 9 1828 227 216 20 0 chrX 162950898 162950949 -3699347 + ID4_ SINE ID 15 66 -17 9 1828 907 228 47 24 chrX 162951097 162951308 -3698988 + B3 SINE B2 1 216 0 9 1828 230 307 0 13 chrX 162951368 162951444 -3698852 + ID4_ SINE ID 3 77 -6 9 1828 403 291 35 7 chrX 162951758 162951900 -3698396 - MER3 DNA MER1_type -63 146 1 9 1828 605 244 111 30 chrX 162952076 162952147 -3698149 - B3 SINE B2 0 216 148 9 1828 1979 110 9 53 chrX 162952147 162952484 -3697812 + RLTRETN_Mm LTR ERVK 1 322 0 9 1828 605 244 111 30 chrX 162952484 162952611 -3697685 - B3 SINE B2 -69 147 3 9 1828 457 261 64 48 chrX 162953341 162953466 -3696830 - RSINE1 SINE B4 0 165 39 9 1828 216 0 0 0 chrX 162953467 162953491 -3696805 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 1828 373 287 6 83 chrX 162953494 162953514 -3696782 - MT2B LTR ERVL -305 296 211 9 1828 700 168 8 0 chrX 162953514 162953639 -3696657 - B1_Mus2 SINE Alu -21 126 1 9 1828 373 287 6 83 chrX 162953639 162953650 -3696646 - MT2B LTR ERVL -305 210 153 9 1828 455 257 0 0 chrX 162953698 162953811 -3696485 - PB1D7 SINE Alu -7 113 1 9 1828 536 303 160 10 chrX 162954062 162954261 -3696035 + B4A SINE B4 2 230 -62 9 1828 617 259 81 12 chrX 162954261 162954413 -3695883 + B3 SINE B2 1 162 -54 9 1828 554 63 13 0 chrX 162954413 162954492 -3695804 + (CA)n Simple_repeat Simple_repeat 2 81 0 9 1828 617 259 81 12 chrX 162954492 162954511 -3695785 + B3 SINE B2 163 183 -33 9 1828 534 301 86 25 chrX 162954567 162954644 -3695652 - L1M5 LINE L1 -356 5817 5736 9 1828 789 143 55 35 chrX 162954644 162954789 -3695507 - B1_Mur2 SINE Alu 0 149 2 9 1828 534 302 87 26 chrX 162954789 162955039 -3695257 - L1M5 LINE L1 -438 5735 5468 9 1828 285 236 79 0 chrX 162955066 162955099 -3695197 + MER5B DNA MER1_type 2 41 -137 9 1828 965 242 102 91 chrX 162955099 162955428 -3694868 + ORR1D2 LTR MaLR 1 337 -33 9 1828 230 0 33 0 chrX 162955428 162955458 -3694838 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 1828 965 242 102 91 chrX 162955458 162955492 -3694804 + ORR1D2 LTR MaLR 338 368 -2 9 1828 285 236 79 0 chrX 162955492 162955547 -3694749 + MER5B DNA MER1_type 42 96 -82 9 1828 427 248 113 24 chrX 162955635 162955759 -3694537 - ID_B1 SINE B4 0 224 90 9 1828 942 246 13 18 chrX 162957186 162957410 -3692886 - ID_B1 SINE B4 -1 223 1 9 1828 276 102 0 0 chrX 162957644 162957693 -3692603 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 9 1828 437 232 135 8 chrX 162958369 162958495 -3691801 - B1_Mur3 SINE Alu -1 148 7 9 1828 237 237 77 26 chrX 162958427 162958505 -3691791 - MT2B LTR ERVL -361 240 159 9 1828 533 194 64 121 chrX 162958517 162958658 -3691638 - ID_B1 SINE B4 -8 216 84 9 1828 207 0 0 0 chrX 162959320 162959343 -3690953 + (T)n Simple_repeat Simple_repeat 1 23 0 9 1828 527 205 17 26 chrX 162959437 162959552 -3690744 - B1_Mur1 SINE Alu -5 144 31 9 1828 840 247 5 16 chrX 162959548 162959737 -3690559 - ID_B1 SINE B4 -37 187 1 9 1828 412 235 0 0 chrX 162959813 162959894 -3690402 + ID4_ SINE ID 1 81 -2 9 1828 389 210 30 10 chrX 162960521 162960622 -3689674 + LTR40a LTR ERVL 44 146 -373 9 1828 198 0 0 0 chrX 162960635 162960657 -3689639 + (TC)n Simple_repeat Simple_repeat 2 23 0 9 1828 410 0 20 0 chrX 162960657 162960706 -3689590 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 1828 478 266 189 6 chrX 162960709 162960868 -3689428 - ID_B1 SINE B4 -14 210 23 9 1828 456 19 0 0 chrX 162961175 162961228 -3689068 + (TG)n Simple_repeat Simple_repeat 2 54 0 9 1828 198 0 0 0 chrX 162961228 162961249 -3689047 + (TAGTG)n Simple_repeat Simple_repeat 4 25 0 9 1828 785 244 37 0 chrX 162961253 162961417 -3688879 - B3 SINE B2 -46 170 1 9 1828 829 167 11 2 chrX 162962256 162963216 -3687080 + (TG)n Simple_repeat Simple_repeat 1 968 0 9 1828 704 168 6 6 chrX 162963263 162963597 -3686699 + (TG)n Simple_repeat Simple_repeat 1 334 0 9 1828 243 321 18 18 chrX 162963597 162963711 -3686585 - PB1D10 SINE Alu -3 114 1 9 1828 611 241 48 6 chrX 162963711 162963786 -3686510 - ID SINE ID -142 82 1 9 1828 1535 316 66 22 chrX 162963960 162964264 -3686032 + MER77 LTR ERVL 3 302 -305 9 1828 932 281 52 37 chrX 162964264 162964534 -3685762 + B4 SINE B4 1 274 -18 9 1828 530 41 0 14 chrX 162964537 162964611 -3685685 + (CA)n Simple_repeat Simple_repeat 2 74 0 9 1828 1535 316 66 22 chrX 162964611 162964849 -3685447 + MER77 LTR ERVL 303 569 -38 9 1828 1150 239 30 119 chrX 162965849 162965954 -3684342 - MTE2b LTR MaLR -11 368 266 9 1828 4982 158 60 7 chrX 162965954 162966815 -3683481 + RMER13B LTR ERVK 1 907 -1 9 1828 1150 239 30 119 chrX 162966815 162967113 -3683183 - MTE2b LTR MaLR -114 265 1 9 1828 1062 231 19 0 chrX 162967372 162967580 -3682716 - B3 SINE B2 -3 213 2 9 1828 789 189 81 66 chrX 162968201 162968399 -3681897 + MTE2b LTR MaLR 1 201 -178 9 1828 633 49 0 0 chrX 162970012 162970093 -3680203 + (GAAA)n Simple_repeat Simple_repeat 2 82 0 9 1828 953 186 41 10 chrX 162970246 162970442 -3679854 - B3 SINE B2 -9 207 6 9 1828 328 245 75 0 chrX 162970575 162970669 -3679627 + Lx8 LINE L1 6878 6978 -495 9 1828 650 139 17 0 chrX 162970817 162970932 -3679364 - URR1A DNA MER1_type -61 165 49 9 1828 280 229 67 77 chrX 162971493 162971597 -3678699 + MER58B DNA MER1_type 239 341 0 9 1828 313 270 11 33 chrX 162971754 162971846 -3678450 - B1_Mur1 SINE Alu -34 115 26 9 1828 183 42 0 0 chrX 162971877 162971901 -3678395 + (GTTTG)n Simple_repeat Simple_repeat 1 24 0 9 1828 786 188 0 53 chrX 162971909 162972061 -3678235 - B1_Mur4 SINE Alu -6 144 1 9 1828 1167 62 0 0 chrX 162972075 162972221 -3678075 - B1_Mm SINE Alu 0 147 2 9 1828 21 36 0 0 chrX 162972222 162972250 -3678046 + AT_rich Low_complexity Low_complexity 1 28 0 9 1828 530 228 0 9 chrX 162972259 162972374 -3677922 - RSINE1 SINE B4 -49 116 3 9 1828 413 248 51 29 chrX 162972933 162973070 -3677226 + RMER15 LTR ERVL 421 560 -15 9 1828 1347 266 83 39 chrX 162973609 162974091 -3676205 + RMER5 LTR ERV1 15 517 -17 9 1828 195 42 0 0 chrX 162974091 162974115 -3676181 + (TTA)n Simple_repeat Simple_repeat 1 24 0 9 1828 557 278 0 0 chrX 162974713 162974839 -3675457 - B1_Mur1 SINE Alu -23 126 1 9 1828 290 224 104 0 chrX 162974925 162974992 -3675304 + Lx8 LINE L1 7149 7222 -251 9 1828 563 0 0 15 chrX 162975990 162976058 -3674238 + (TTCC)n Simple_repeat Simple_repeat 4 70 0 9 1828 1194 129 28 0 chrX 162976059 162976237 -3674059 - B2_Mm2 SINE B2 -12 183 1 9 1828 1432 273 31 83 chrX 162976807 162977346 -3672950 + Lx8 LINE L1 6963 7473 0 9 1828 670 163 62 21 chrX 162977886 162978030 -3672266 + B1_Mur4 SINE Alu 1 150 0 9 1828 1071 103 62 22 chrX 162978399 162978577 -3671719 - B2_Mm2 SINE B2 -9 186 2 9 1828 1541 49 5 0 chrX 162978677 162978862 -3671434 + B2_Mm1t SINE B2 1 186 -7 9 1828 244 196 0 0 chrX 162978863 162978909 -3671387 - MIRb SINE MIR -163 105 60 9 1828 270 0 0 0 chrX 162979116 162979146 -3671150 + (TC)n Simple_repeat Simple_repeat 2 31 0 9 1828 527 300 104 39 chrX 162979214 162979474 -3670822 - B4 SINE B4 -14 278 2 9 1828 406 259 9 27 chrX 162979498 162979609 -3670687 + RSINE1 SINE B4 43 151 -14 9 1828 778 252 43 10 chrX 162979690 162979898 -3670398 + ID_B1 SINE B4 2 216 -8 9 1828 346 50 50 0 chrX 162980194 162980254 -3670042 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 1 1828 180 0 0 0 chrX 162980289 162980309 -3669987 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1828 1251 95 15 35 chrX 162980420 162980456 -3669840 - B2_Mm2 SINE B2 -1 194 159 1 1828 180 0 0 0 chrX 162980456 162980476 -3669820 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1 1828 1251 95 15 35 chrX 162980476 162980636 -3669660 - B2_Mm2 SINE B2 -37 158 2 1 1828 446 169 0 11 chrX 162980674 162980764 -3669532 + CT-rich Low_complexity Low_complexity 6 94 0 1 1828 326 280 293 28 chrX 162980767 162980934 -3669362 - ID_B1 SINE B4 -13 211 1 1 1828 599 294 123 50 chrX 162981256 162981557 -3668739 - LTR16C LTR ERVL -2 487 165 1 1828 21 0 0 0 chrX 162981774 162981795 -3668501 + AT_rich Low_complexity Low_complexity 1 21 0 1 1828 867 277 75 26 chrX 162981856 162982123 -3668173 - B4A SINE B4 -7 285 6 1 1828 227 299 27 87 chrX 162982620 162982663 -3667633 + MT2B2 LTR ERVL 124 157 -427 1 1828 428 314 36 0 chrX 162982663 162982803 -3667493 + B1F1 SINE Alu 4 148 -1 1 1828 239 250 19 0 chrX 162982861 162982913 -3667383 + RSINE1 SINE B4 96 148 -17 1 1828 479 250 95 0 chrX 162983113 162983229 -3667067 - ID_B1 SINE B4 -11 213 87 1 1828 200 163 0 23 chrX 162983350 162983394 -3666902 + (CCA)n Simple_repeat Simple_repeat 1 43 0 1 1828 513 0 0 0 chrX 162983709 162983766 -3666530 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1828 369 0 0 0 chrX 162983766 162983806 -3666490 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 1828 598 255 133 15 chrX 162983956 162984151 -3666145 - ID_B1 SINE B4 -4 220 3 1 1828 414 0 0 0 chrX 162984236 162984282 -3666014 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1828 406 270 144 42 chrX 162985856 162986119 -3664177 - B4A SINE B4 -2 290 1 1 1828 879 224 36 0 chrX 162987175 162987367 -3662929 - ID_B1 SINE B4 -24 200 2 1 1828 692 127 0 56 chrX 162988022 162988147 -3662149 + B1_Mur3 SINE Alu 25 142 -7 1 1828 217 125 18 18 chrX 162988154 162988211 -3662085 + A-rich Low_complexity Low_complexity 4 60 0 1 1828 1120 233 105 22 chrX 162988806 162989130 -3661166 + ORR1E LTR MaLR 4 354 -5 1 1828 228 309 0 0 chrX 162989205 162989273 -3661023 + LTR16C LTR ERVL 364 431 -58 1 1828 684 193 0 0 chrX 162989448 162989567 -3660729 - B1_Mur1 SINE Alu 0 149 31 1 1828 663 275 64 55 chrX 162989584 162989803 -3660493 - ID_B1 SINE B4 -3 221 1 1 1828 258 239 0 64 chrX 162990247 162990341 -3659955 + G-rich Low_complexity Low_complexity 3 90 0 1 1828 477 0 0 0 chrX 162990716 162990769 -3659527 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1828 547 283 115 5 chrX 162990773 162990965 -3659331 - ID_B1 SINE B4 -10 214 2 1 1828 328 221 0 25 chrX 162991329 162991408 -3658888 + ID4 SINE ID 1 77 -6 1 1828 472 244 38 104 chrX 162991443 162991626 -3658670 - B4A SINE B4 -120 172 2 1 1828 1125 78 7 0 chrX 162992038 162992180 -3658116 + B1_Mus2 SINE Alu 2 144 -3 1 1828 897 10 0 0 chrX 162992180 162992282 -3658014 + (GAA)n Simple_repeat Simple_repeat 2 103 0 1 1828 232 279 159 28 chrX 162993078 162993185 -3657111 + L1MB3 LINE L1 5917 6037 -147 1 1828 297 0 0 0 chrX 162993205 162993238 -3657058 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1828 402 21 0 0 chrX 162993241 162993288 -3657008 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 1828 360 284 0 43 chrX 162993300 162993392 -3656904 - RSINE1 SINE B4 0 165 78 1 1828 319 144 47 139 chrX 162993557 162993636 -3656660 + L1MB3 LINE L1 6067 6131 -52 1 1828 1459 56 17 0 chrX 162993636 162993814 -3656482 - B2_Mm2 SINE B2 -14 181 1 1 1828 319 144 47 139 chrX 162993814 162993863 -3656433 + L1MB3 LINE L1 6132 6182 -1 1 1828 652 239 77 95 chrX 162993901 162994015 -3656281 - ID_B1 SINE B4 -5 219 93 1 1828 704 40 0 10 chrX 162994015 162994117 -3656179 - L1Md_F3 LINE L1 -2 6582 6482 1 1828 652 239 77 95 chrX 162994117 162994224 -3656072 - ID_B1 SINE B4 -132 92 2 1 1828 1205 175 0 5 chrX 162994228 162994440 -3655856 + RLTR20A LTR ERVK 1 211 -330 1 1828 806 182 28 0 chrX 162994460 162994603 -3655693 - B1_Mur2 SINE Alu 0 149 3 1 1828 28 29 0 0 chrX 162994613 162994648 -3655648 + AT_rich Low_complexity Low_complexity 1 35 0 1 1828 696 185 0 7 chrX 162994665 162994801 -3655495 - B1_Mur3 SINE Alu -6 143 9 1 1828 401 285 13 44 chrX 162994801 162994819 -3655477 - ID_B1 SINE B4 -2 218 70 1 1828 366 23 0 0 chrX 162995227 162995270 -3655026 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1828 868 18 18 0 chrX 162995501 162995611 -3654685 + (TCTA)n Simple_repeat Simple_repeat 4 115 0 1 1828 370 260 11 15 chrX 162995612 162995714 -3654582 - B1F1 SINE Alu -51 99 1 1 1828 22 35 0 0 chrX 162995832 162995861 -3654435 + AT_rich Low_complexity Low_complexity 1 29 0 1 1828 299 25 0 24 chrX 162995867 162995908 -3654388 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1828 466 248 103 8 chrX 162995918 162996044 -3654252 - RSINE1 SINE B4 -21 144 7 1 1828 33 0 0 0 chrX 162996050 162996083 -3654213 + AT_rich Low_complexity Low_complexity 1 33 0 1 1828 872 172 6 0 chrX 162996421 162996590 -3653706 + CT-rich Low_complexity Low_complexity 2 171 0 1 1828 675 250 31 53 chrX 162996678 162996906 -3653390 + ID_B1 SINE B4 2 224 0 1 1828 342 0 0 0 chrX 162997246 162997284 -3653012 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1828 620 278 61 0 chrX 162998059 162998257 -3652039 - MER20 DNA MER1_type -2 217 8 1 1828 225 83 0 0 chrX 162998311 162998347 -3651949 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 1828 634 295 88 5 chrX 162998347 162998541 -3651755 - ID_B1 SINE B4 -11 213 4 1 1828 1987 159 3 58 chrX 162998658 162999038 -3651258 + ORR1B2 LTR MaLR 1 359 -8 1 1828 299 305 72 17 chrX 162999114 162999294 -3651002 + MER53 DNA hAT 3 192 -1 1 1828 490 261 62 0 chrX 162999314 162999444 -3650852 - ID_B1 SINE B4 -3 221 84 1 1828 809 255 73 5 chrX 162999540 162999745 -3650551 + ID_B1 SINE B4 3 221 -3 1 1828 692 214 14 0 chrX 162999752 162999892 -3650404 + B1_Mur2 SINE Alu 7 148 -1 1 1828 951 170 36 10 chrX 163000236 163000432 -3649864 - URR1A DNA MER1_type 0 226 26 1 1828 278 281 24 12 chrX 163000471 163000554 -3649742 - ID SINE ID -139 85 2 2 1828 183 42 0 0 chrX 163000688 163000712 -3649584 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 1828 727 240 0 14 chrX 163001523 163001671 -3648625 - RSINE1 SINE B4 -17 148 3 4 1828 549 229 194 66 chrX 163001680 163001802 -3648494 - B4 SINE B4 -66 226 79 5 1828 360 0 0 0 chrX 163001802 163001842 -3648454 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 6 1828 549 229 194 66 chrX 163001842 163001915 -3648381 - B4 SINE B4 -214 78 6 5 1828 190 306 16 0 chrX 163002063 163002125 -3648171 + L2c LINE L2 3317 3379 -8 7 1828 373 234 0 13 chrX 163002424 163002502 -3647794 - ID4 SINE ID -5 78 2 8 1828 479 235 0 50 chrX 163002506 163002627 -3647669 - PB1D10 SINE Alu 0 117 3 9 1828 706 290 51 19 chrX 163003590 163003804 -3646492 + ID_B1 SINE B4 1 221 -3 1 1828 235 135 0 0 chrX 163004565 163004602 -3645694 - ID SINE ID -178 46 10 1 1828 471 296 60 93 chrX 163004864 163005014 -3645282 - Lx8 LINE L1 -8 7465 7326 1 1828 2223 170 5 26 chrX 163005014 163005400 -3644896 + ORR1C1 LTR MaLR 1 378 0 1 1828 471 296 60 93 chrX 163005400 163005551 -3644745 - Lx8 LINE L1 -148 7325 7174 1 1828 269 73 14 68 chrX 163006601 163006674 -3643622 + (CAAA)n Simple_repeat Simple_repeat 1 69 0 1 1828 1225 82 13 6 chrX 163006782 163007101 -3643195 + (GAAA)n Simple_repeat Simple_repeat 1 321 0 1 1828 358 222 194 29 chrX 163007442 163007581 -3642715 - MER58B DNA MER1_type -6 335 174 1 1828 410 296 162 6 chrX 163007616 163007789 -3642507 - ID_B1 SINE B4 -22 202 3 1 1828 231 381 34 0 chrX 163007797 163007915 -3642381 - MER58B DNA MER1_type -219 122 1 1 1828 821 148 315 0 chrX 163008349 163008511 -3641785 - B3 SINE B2 0 216 4 1 1828 302 292 97 110 chrX 163008559 163008713 -3641583 - MER20 DNA MER1_type -4 215 64 1 1828 375 323 47 8 chrX 163008726 163008854 -3641442 + B1F2 SINE Alu 1 133 -16 2 1828 8181 26 1 0 chrX 163008856 163009789 -3640507 - L1Md_F3 LINE L1 0 6584 5651 2 1828 216 305 125 10 chrX 163009865 163009961 -3640335 - L2b LINE L2 -15 3360 3254 2 1828 253 159 0 0 chrX 163010067 163010111 -3640185 - ID4 SINE ID -38 45 2 2 1828 26 0 0 0 chrX 163010136 163010162 -3640134 + AT_rich Low_complexity Low_complexity 1 26 0 2 1828 2943 104 10 0 chrX 163010162 163010577 -3639719 - L1_Mus3 LINE L1 0 6638 6220 2 1828 331 74 19 0 chrX 163010578 163010632 -3639664 + L1_Mm LINE L1 1671 1725 -4158 2 1828 230 342 32 71 chrX 163010696 163010822 -3639474 - ORR1D2 LTR MaLR -141 229 109 2 1828 290 276 252 25 chrX 163011158 163011444 -3638852 + MER57C2 LTR ERV1 75 425 -9 2 1828 456 181 23 16 chrX 163011467 163011596 -3638700 - Lx6 LINE L1 -3 7457 7328 2 1828 450 246 27 0 chrX 163012200 163012310 -3637986 + B1F SINE Alu 37 149 0 3 1828 852 227 62 5 chrX 163012320 163012515 -3637781 + B3 SINE B2 2 207 -9 3 1828 207 229 21 0 chrX 163012806 163012854 -3637442 + (CATA)n Simple_repeat Simple_repeat 1 49 0 3 1828 311 93 0 0 chrX 163013710 163013753 -3636543 - HAL1-3A_ME LINE L1 -835 2023 1981 3 1828 306 0 0 0 chrX 163013799 163013833 -3636463 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 1828 789 267 5 30 chrX 163014535 163014732 -3635564 - B3A SINE B2 -5 193 2 3 1828 1098 233 24 38 chrX 163014899 163015189 -3635107 - B4 SINE B4 -5 287 2 3 1828 292 241 89 0 chrX 163015282 163015361 -3634935 - RSINE1 SINE B4 -79 86 1 3 1828 476 286 115 36 chrX 163015635 163015827 -3634469 + MLT1F LTR MaLR 205 411 -137 3 1828 37 0 0 0 chrX 163016368 163016405 -3633891 + AT_rich Low_complexity Low_complexity 1 37 0 3 1828 4503 40 6 2 chrX 163016405 163016953 -3633343 - L1Md_F2 LINE L1 -15 6567 6018 4 1828 1261 30 0 18 chrX 163017190 163017358 -3632938 + (TCTCC)n Simple_repeat Simple_repeat 4 168 0 4 1828 1022 168 26 121 chrX 163017393 163017487 -3632809 - ID_B1 SINE B4 -15 209 125 4 1828 1187 68 92 0 chrX 163017487 163017650 -3632646 - B2_Mm2 SINE B2 -14 181 4 4 1828 1022 168 26 121 chrX 163017650 163017786 -3632510 - ID_B1 SINE B4 -100 124 1 4 1828 598 110 234 0 chrX 163017807 163017952 -3632344 - Lx9 LINE L1 -1 7643 7465 4 1828 36 40 0 0 chrX 163018085 163018135 -3632161 + AT_rich Low_complexity Low_complexity 1 50 0 4 1828 903 254 54 65 chrX 163018381 163018659 -3631637 - B4A SINE B4 -16 276 2 4 1828 534 295 14 28 chrX 163019113 163019256 -3631040 - RSINE1 SINE B4 -15 150 10 4 1828 254 237 45 136 chrX 163019183 163019271 -3631025 - B3A SINE B2 -118 80 1 4 1828 612 281 37 43 chrX 163019755 163019989 -3630307 + MLT1D LTR MaLR 204 467 -38 4 1828 639 287 77 18 chrX 163020260 163020533 -3629763 - MER33 DNA MER1_type -1 323 35 5 1828 586 214 96 105 chrX 163020788 163021007 -3629289 - ID_B1 SINE B4 -6 218 2 5 1828 360 164 0 0 chrX 163021015 163021082 -3629214 + CT-rich Low_complexity Low_complexity 2 68 0 5 1828 836 176 0 45 chrX 163021109 163021121 -3629175 - B1_Mur4 SINE Alu -1 149 138 5 1828 237 33 0 0 chrX 163021121 163021151 -3629145 + (TTG)n Simple_repeat Simple_repeat 2 31 0 5 1828 836 176 0 45 chrX 163021151 163021293 -3629003 - B1_Mur4 SINE Alu -13 137 2 5 1828 295 294 25 134 chrX 163022178 163022335 -3627961 + MER20 DNA MER1_type 49 188 -31 5 1828 390 69 0 0 chrX 163022408 163022466 -3627830 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1828 238 283 100 58 chrX 163022519 163022639 -3627657 + MIR SINE MIR 36 160 -102 5 1828 22 0 0 0 chrX 163023801 163023823 -3626473 + GC_rich Low_complexity Low_complexity 1 22 0 5 1828 1267 225 143 14 chrX 163024166 163024522 -3625774 + MTD LTR MaLR 18 419 0 5 1828 278 330 79 25 chrX 163024648 163024850 -3625446 + MLT1H LTR MaLR 94 306 -243 6 1828 390 21 0 0 chrX 163025249 163025296 -3625000 + (TTTTG)n Simple_repeat Simple_repeat 1 47 0 6 1828 539 183 78 9 chrX 163025296 163025412 -3624884 - B1_Mur1 SINE Alu -13 136 13 6 1828 246 315 11 0 chrX 163025619 163025708 -3624588 - LTR16C LTR ERVL 0 489 400 6 1828 554 110 22 0 chrX 163026156 163026247 -3624049 + (TCCC)n Simple_repeat Simple_repeat 4 96 0 6 1828 491 0 17 0 chrX 163026703 163026762 -3623534 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 1828 322 336 57 0 chrX 163026906 163027046 -3623250 - MER5B DNA MER1_type -22 156 9 6 1828 216 375 24 97 chrX 163027269 163027393 -3622903 - B4 SINE B4 -113 179 65 6 1828 565 196 10 10 chrX 163027454 163027557 -3622739 - B1F2 SINE Alu -44 105 3 6 1828 1009 131 14 0 chrX 163027617 163027762 -3622534 - B1_Mus1 SINE Alu -1 147 1 6 1828 231 167 74 0 chrX 163027908 163027962 -3622334 + CT-rich Low_complexity Low_complexity 2 59 0 7 1828 219 396 9 0 chrX 163028342 163028448 -3621848 - MIRb SINE MIR -75 193 87 7 1828 685 245 14 139 chrX 163028478 163028701 -3621595 + B3 SINE B2 17 211 -5 7 1828 456 246 12 26 chrX 163028772 163028911 -3621385 - B1F SINE Alu 0 149 11 7 1828 288 278 44 0 chrX 163029062 163029152 -3621144 - RMER30 DNA MER1_type -3 199 106 7 1828 297 0 0 0 chrX 163029277 163029310 -3620986 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 7 1828 582 239 50 22 chrX 163029315 163029495 -3620801 - Lx6 LINE L1 -36 7424 7240 7 1828 395 315 27 27 chrX 163029498 163029645 -3620651 - B4A SINE B4 -79 213 67 7 1828 830 170 0 0 chrX 163029667 163029802 -3620494 - B1_Mus1 SINE Alu -13 135 1 7 1828 237 267 0 122 chrX 163030367 163030465 -3619831 - L2c LINE L2 -2 3385 3300 7 1828 378 0 0 0 chrX 163030822 163030864 -3619432 + (TC)n Simple_repeat Simple_repeat 1 42 0 8 1828 492 99 0 0 chrX 163030865 163030936 -3619360 + (CACG)n Simple_repeat Simple_repeat 1 71 0 8 1828 407 263 158 0 chrX 163031178 163031292 -3619004 + B1_Mur2 SINE Alu 1 132 -17 8 1828 2625 37 12 18 chrX 163032019 163032347 -3617949 + L1Md_F3 LINE L1 6235 6560 -24 8 1828 330 26 0 0 chrX 163032347 163032386 -3617910 + (TA)n Simple_repeat Simple_repeat 1 39 0 8 1828 298 306 57 13 chrX 163032509 163032668 -3617628 + LTR16C LTR ERVL 187 352 -137 8 1828 225 320 19 46 chrX 163033372 163033480 -3616816 + MT2B LTR ERVL 150 254 -347 8 1828 327 285 62 49 chrX 163033383 163033527 -3616769 + ID_B1 SINE B4 77 222 -2 8 1828 593 258 42 11 chrX 163033781 163033956 -3616340 - B3A SINE B2 -10 183 1 8 1828 590 189 114 0 chrX 163034407 163034539 -3615757 - B1_Mur1 SINE Alu -1 148 2 8 1828 24 0 0 0 chrX 163034546 163034570 -3615726 + AT_rich Low_complexity Low_complexity 1 24 0 9 1828 2567 73 0 0 chrX 163034570 163034897 -3615399 - L1_Mus1 LINE L1 0 6567 6241 9 1828 1411 18 0 0 chrX 163035299 163035462 -3614834 - L1_Mus1 LINE L1 0 6567 6405 9 1828 1184 81 0 0 chrX 163035860 163036008 -3614288 + B1_Mus1 SINE Alu 1 148 0 9 1828 216 307 27 0 chrX 163036729 163036804 -3613492 - MIRc SINE MIR -187 81 5 9 1828 297 307 63 14 chrX 163037259 163037401 -3612895 + LTR37A LTR ERV1 166 314 -112 9 1828 261 227 5 0 chrX 163037406 163037464 -3612832 - PB1D7 SINE Alu -78 71 12 9 1828 490 312 59 76 chrX 163038636 163038924 -3611372 + Lx8 LINE L1 6988 7270 -203 9 1828 225 220 17 17 chrX 163038956 163039016 -3611280 + RMER15 LTR ERVL 494 553 -22 9 1828 323 321 45 8 chrX 163039091 163039128 -3611168 + ID SINE ID 44 85 -139 9 1828 239 327 63 9 chrX 163039128 163039239 -3611057 + PB1D10 SINE Alu 1 117 0 1 1828 478 150 0 12 chrX 163039243 163039324 -3610972 + MTC LTR MaLR 1 80 -341 1 1828 7408 66 19 21 chrX 163039325 163040421 -3609875 + L1_Mus2 LINE L1 5475 6566 0 1 1828 1793 173 53 12 chrX 163040434 163040774 -3609522 + MTC LTR MaLR 68 421 0 1 1828 1180 50 0 0 chrX 163041051 163041190 -3609106 + B1_Mus1 SINE Alu 2 140 -8 1 1828 389 19 38 0 chrX 163041190 163041243 -3609053 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 1 1828 284 70 0 23 chrX 163041243 163041287 -3609009 + (GAAA)n Simple_repeat Simple_repeat 4 46 0 1 1828 599 261 75 0 chrX 163042042 163042241 -3608055 - MER2 DNA MER2_type -6 339 126 1 1828 730 154 28 157 chrX 163042323 163042539 -3607757 + ORR1C1 LTR MaLR 1 188 -190 1 1828 1657 170 29 23 chrX 163042555 163042898 -3607398 + RMER4A LTR ERVK 17 361 -105 1 1828 1036 139 0 0 chrX 163042888 163043054 -3607242 + ORR1C1 LTR MaLR 213 378 0 1 1828 489 292 132 31 chrX 163043138 163043396 -3606900 + B4A SINE B4 1 284 -8 1 1828 512 216 54 31 chrX 163043472 163043601 -3606695 + ID_B1 SINE B4 93 224 0 1 1828 1392 263 27 5 chrX 163043743 163044114 -3606182 - MTEa LTR MaLR 0 379 1 1 1828 679 213 115 6 chrX 163044131 163044287 -3606009 + B3 SINE B2 16 188 -28 1 1828 1061 202 88 36 chrX 163044288 163044641 -3605655 - MT2B LTR ERVL 0 601 92 1 1828 4108 53 0 10 chrX 163044702 163045214 -3605082 - L1_Mus2 LINE L1 -221 6345 5839 1 1828 1338 60 70 0 chrX 163045214 163045399 -3604897 + L1_Mus2 LINE L1 6369 6566 0 1 1828 1082 70 35 14 chrX 163045419 163045563 -3604733 + B1_Mus1 SINE Alu 2 148 0 1 1828 410 214 0 12 chrX 163045580 163045665 -3604631 - MT2B LTR ERVL -445 88 5 1 1828 276 77 0 0 chrX 163045665 163045704 -3604592 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1828 224 100 0 24 chrX 163045705 163045746 -3604550 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 1828 23 0 0 0 chrX 163046047 163046070 -3604226 + AT_rich Low_complexity Low_complexity 1 23 0 1 1828 567 222 38 38 chrX 163046585 163046716 -3603580 - B1F SINE Alu -14 135 5 1 1828 180 0 0 0 chrX 163048247 163048267 -3602029 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1828 331 101 25 127 chrX 163048360 163048439 -3601857 - HAL1-3A_ME LINE L1 -812 2046 1976 1 1828 216 195 0 0 chrX 163048439 163048480 -3601816 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1828 627 308 85 22 chrX 163048503 163048775 -3601521 - B4A SINE B4 -2 290 2 1 1828 185 348 0 0 chrX 163048838 163048907 -3601389 + L2a LINE L2 3103 3171 -255 1 1828 628 222 90 23 chrX 163049372 163049566 -3600730 - ORR1D1 LTR MaLR -2 382 166 1 1828 600 169 0 0 chrX 163049570 163049700 -3600596 + GA-rich Low_complexity Low_complexity 1 130 0 1 1828 888 189 5 58 chrX 163049700 163049891 -3600405 - ORR1D1 LTR MaLR -193 181 1 1 1828 673 269 6 31 chrX 163049891 163050050 -3600246 - B4 SINE B4 -56 236 82 1 1828 192 194 0 0 chrX 163050054 163050090 -3600206 - MER5A DNA MER1_type -119 70 35 1 1828 210 301 155 0 chrX 163050724 163050827 -3599469 + L2a LINE L2 3305 3423 -3 1 1828 395 358 74 22 chrX 163050939 163051170 -3599126 - Charlie10a DNA MER1_type -34 246 4 1 1828 405 0 0 0 chrX 163051232 163051277 -3599019 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1828 192 152 0 0 chrX 163051277 163051310 -3598986 + GA-rich Low_complexity Low_complexity 1 33 0 1 1828 930 162 0 0 chrX 163051316 163051464 -3598832 + B1_Mur3 SINE Alu 2 149 0 1 1828 213 39 0 0 chrX 163051467 163051493 -3598803 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 1829 251 176 0 19 chrX 163053800 163053852 -3596444 - ID4 SINE ID -29 54 4 1 1829 754 243 120 11 chrX 163053958 163054149 -3596147 - B3 SINE B2 -4 212 1 1 1829 1059 262 35 14 chrX 163054461 163054747 -3595549 + B4 SINE B4 1 292 0 1 1829 216 273 0 0 chrX 163054748 163054803 -3595493 + (CATA)n Simple_repeat Simple_repeat 4 58 0 1 1829 1201 55 0 0 chrX 163055082 163055227 -3595069 + B1_Mus2 SINE Alu 3 147 0 1 1829 584 210 8 53 chrX 163055445 163055549 -3594747 - B1F1 SINE Alu -23 126 25 1 1829 1397 168 251 38 chrX 163055549 163055915 -3594381 + RLTR41 LTR ERV1 1 444 -2 1 1829 584 210 8 53 chrX 163055915 163055941 -3594355 - B1F1 SINE Alu -125 24 2 1 1829 2383 172 14 12 chrX 163055975 163056393 -3593903 - MTC LTR MaLR -2 419 1 1 1829 5262 167 62 12 chrX 163056521 163057572 -3592724 + RLTR25A LTR ERVK 1 1103 0 1 1829 735 260 67 0 chrX 163058126 163058334 -3591962 + B4A SINE B4 3 224 -68 1 1829 210 231 0 0 chrX 163058378 163058443 -3591853 + GA-rich Low_complexity Low_complexity 1 65 0 1 1829 211 196 0 0 chrX 163059127 163059173 -3591123 + GA-rich Low_complexity Low_complexity 2 47 0 1 1829 25 0 0 0 chrX 163059479 163059504 -3590792 + GC_rich Low_complexity Low_complexity 1 25 0 1 1829 235 318 71 0 chrX 163060314 163060440 -3589856 + MER92B LTR ERV1 1 135 -501 1 1829 183 85 20 41 chrX 163061021 163061070 -3589226 + (TATAA)n Simple_repeat Simple_repeat 1 48 0 1 1829 905 188 59 5 chrX 163061839 163062026 -3588270 - B3A SINE B2 0 198 2 1 1829 307 222 42 0 chrX 163062035 163062107 -3588189 - HAL1-3A_ME LINE L1 -808 2050 1976 1 1829 592 285 39 34 chrX 163062108 163062286 -3588010 - B3A SINE B2 -16 182 4 1 1829 582 168 0 0 chrX 163062571 163062684 -3587612 + GA-rich Low_complexity Low_complexity 2 114 0 1 1829 300 252 24 169 chrX 163062752 163062876 -3587420 + MT2B LTR ERVL 153 258 -343 1 1829 780 144 0 92 chrX 163062775 163062928 -3587368 + B1_Mur3 SINE Alu 11 149 0 1 1829 391 58 14 42 chrX 163062928 163063000 -3587296 + (CAAAA)n Simple_repeat Simple_repeat 1 70 0 1 1829 28 38 0 19 chrX 163063190 163063217 -3587079 + AT_rich Low_complexity Low_complexity 1 27 0 1 1829 1083 217 9 14 chrX 163063217 163063432 -3586864 + B3 SINE B2 2 215 -1 1 1829 28 38 0 19 chrX 163063432 163063457 -3586839 + AT_rich Low_complexity Low_complexity 1 25 0 1 1829 648 97 0 0 chrX 163063573 163063666 -3586630 + (TATAA)n Simple_repeat Simple_repeat 2 94 0 1 1829 472 299 0 0 chrX 163064615 163064742 -3585554 + MER3 DNA MER1_type 22 148 -61 1 1829 771 202 54 16 chrX 163065523 163065709 -3584587 + ID_B1 SINE B4 3 195 -29 1 1829 181 231 0 0 chrX 163065775 163065814 -3584482 + L2 LINE L2 99 137 -3282 1 1829 2805 167 39 31 chrX 163065925 163066437 -3583859 + RMER1C Other Other 824 1339 -3 1 1829 249 128 0 0 chrX 163066809 163066856 -3583440 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1829 3801 68 88 17 chrX 163067272 163067794 -3582502 + LTRIS2 LTR ERV1 3 561 -3 1 1829 723 24 0 0 chrX 163067889 163067974 -3582322 + (GA)n Simple_repeat Simple_repeat 2 86 0 1 1829 400 354 35 60 chrX 163067975 163068260 -3582036 - B4 SINE B4 -14 278 1 1 1829 219 170 0 0 chrX 163068543 163068590 -3581706 + T-rich Low_complexity Low_complexity 1 47 0 1 1829 1200 61 7 0 chrX 163068592 163068739 -3581557 - B1_Mus1 SINE Alu 0 148 1 1 1829 717 325 63 22 chrX 163068851 163069213 -3581083 + MLT1A1 LTR MaLR 32 408 0 1 1829 181 0 0 65 chrX 163069819 163069850 -3580446 + (TTAA)n Simple_repeat Simple_repeat 4 32 0 1 1829 2086 153 15 63 chrX 163070139 163070536 -3579760 + ORR1C1 LTR MaLR 1 378 0 1 1829 386 290 172 29 chrX 163070869 163071107 -3579189 + LTR50 LTR ERVL 504 775 -20 1 1829 210 194 0 31 chrX 163071116 163071164 -3579132 + T-rich Low_complexity Low_complexity 18 63 0 1 1829 1170 75 7 0 chrX 163071164 163071311 -3578985 - B1_Mus1 SINE Alu 0 148 1 1 1829 210 194 0 31 chrX 163071311 163071326 -3578970 + T-rich Low_complexity Low_complexity 3 17 0 1 1829 1318 210 83 10 chrX 163071355 163071667 -3578629 + MTEb LTR MaLR 3 337 -42 1 1829 312 219 0 31 chrX 163071675 163071748 -3578548 - B1_Mur2 SINE Alu -17 132 62 1 1829 280 207 0 0 chrX 163071778 163071836 -3578460 + MTEb LTR MaLR 322 379 0 1 1829 1502 54 0 31 chrX 163072127 163072319 -3577977 - B2_Mm1a SINE B2 -6 187 2 1 1829 3528 29 5 0 chrX 163072389 163072798 -3577498 + L1Md_T LINE L1 6170 6580 -2 1 1829 423 0 0 0 chrX 163072825 163072872 -3577424 + (TTTTA)n Simple_repeat Simple_repeat 4 50 0 1 1829 1186 54 0 20 chrX 163073395 163073533 -3576763 + B1_Mm SINE Alu 1 138 -9 1 1829 222 62 0 0 chrX 163073533 163073565 -3576731 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 1829 1186 54 0 20 chrX 163073565 163073576 -3576720 + B1_Mm SINE Alu 139 147 0 1 1829 180 0 0 0 chrX 163073576 163073596 -3576700 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1829 1080 275 116 27 chrX 163073806 163074244 -3576052 + MER90a LTR ERV1 5 481 -133 1 1829 592 351 4 13 chrX 163074297 163074528 -3575768 - B4 SINE B4 0 292 64 1 1829 785 236 131 0 chrX 163074531 163074722 -3575574 - B3 SINE B2 0 216 1 1 1829 407 256 12 0 chrX 163074726 163074812 -3575484 - B4 SINE B4 -199 93 7 1 1829 262 373 0 53 chrX 163074817 163074967 -3575329 + MER90a LTR ERV1 473 614 0 1 1829 29 0 0 0 chrX 163074976 163075005 -3575291 + AT_rich Low_complexity Low_complexity 1 29 0 1 1829 206 261 32 32 chrX 163075394 163075489 -3574807 - MIRc SINE MIR 0 268 174 1 1829 248 156 0 0 chrX 163076066 163076111 -3574185 + MIRm SINE MIR 108 152 -124 1 1829 198 118 0 0 chrX 163076246 163076280 -3574016 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1829 522 339 5 16 chrX 163076284 163076470 -3573826 - B4 SINE B4 0 292 109 1 1829 991 151 173 25 chrX 163076835 163077032 -3573264 - URR1A DNA MER1_type 0 226 1 1 1829 663 191 269 11 chrX 163077281 163077456 -3572840 + ID_B1 SINE B4 5 224 0 1 1829 412 216 116 9 chrX 163077590 163077702 -3572594 - ID_B1 SINE B4 -11 213 90 1 1829 24 32 0 0 chrX 163077974 163078005 -3572291 + AT_rich Low_complexity Low_complexity 1 31 0 1 1829 183 42 0 0 chrX 163078154 163078178 -3572118 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1 1829 625 176 130 0 chrX 163079132 163079263 -3571033 - B1_Mur3 SINE Alu -1 148 1 1 1829 656 259 7 0 chrX 163079723 163079858 -3570438 - ID_B1 SINE B4 -59 165 30 1 1829 283 270 0 0 chrX 163079805 163079868 -3570428 - ID4_ SINE ID -2 81 19 2 1829 265 154 19 19 chrX 163080157 163080210 -3570086 + L1MC LINE L1 5613 5665 -2217 2 1829 325 337 104 119 chrX 163080385 163080779 -3569517 + LTR16A LTR ERVL 22 409 -42 2 1829 224 336 16 16 chrX 163081041 163081165 -3569131 + CT-rich Low_complexity Low_complexity 3 126 0 2 1829 5543 68 17 0 chrX 163081169 163081871 -3568425 - L1_Mus1 LINE L1 0 6567 5854 2 1829 255 158 175 0 chrX 163081871 163081928 -3568368 - RMER15 LTR ERVL -106 469 403 2 1829 380 309 19 9 chrX 163081928 163082036 -3568260 - Lx8 LINE L1 -207 7266 7158 2 1829 296 211 0 13 chrX 163082077 163082154 -3568142 + GA-rich Low_complexity Low_complexity 3 78 0 2 1829 1133 78 6 16 chrX 163082154 163082336 -3567960 + (GGA)n Simple_repeat Simple_repeat 1 180 0 2 1829 1184 193 9 18 chrX 163082457 163082684 -3567612 + URR1B DNA MER1_type 1 225 0 2 1829 357 262 28 28 chrX 163082834 163082940 -3567356 + B4A SINE B4 35 140 -152 2 1829 282 29 0 0 chrX 163082940 163082975 -3567321 + (TGGGGG)n Simple_repeat Simple_repeat 6 40 0 2 1829 361 191 0 56 chrX 163082977 163083066 -3567230 + B4A SINE B4 124 207 -85 2 1829 706 89 18 0 chrX 163083163 163083275 -3567021 + (GA)n Simple_repeat Simple_repeat 1 114 0 2 1829 268 247 38 25 chrX 163083906 163083985 -3566311 - MLT1J2 LTR MaLR -305 143 64 2 1829 278 261 178 25 chrX 163084252 163084370 -3565926 - ID_B1 SINE B4 -9 215 80 2 1829 305 253 0 0 chrX 163084666 163084745 -3565551 - MLT1A0 LTR MaLR 0 365 287 2 1829 291 28 0 0 chrX 163084791 163084827 -3565469 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1829 5086 63 31 15 chrX 163084953 163085631 -3564665 - L1Md_F2 LINE L1 -1 6581 5893 2 1829 19070 59 8 1 chrX 163085631 163088033 -3562263 - L1_Mm LINE L1 -82 5801 3382 2 1829 1987 125 0 62 chrX 163088293 163088634 -3561662 - ORR1A2 LTR MaLR -7 320 1 2 1829 1139 63 0 0 chrX 163089086 163089228 -3561068 - B1_Mus1 SINE Alu -2 146 5 2 1829 532 250 68 0 chrX 163090119 163090251 -3560045 + RSINE1 SINE B4 8 148 -17 2 1829 772 248 30 5 chrX 163091056 163091259 -3559037 + ID_B1 SINE B4 11 218 -6 2 1829 2880 132 49 0 chrX 163092048 163092534 -3557762 + RLTR28 LTR ERVL 1 510 -14 2 1829 1105 254 29 92 chrX 163092653 163093034 -3557262 - ORR1E LTR MaLR -2 357 1 2 1829 1193 29 0 0 chrX 163093200 163093338 -3556958 + B1_Mus2 SINE Alu 1 138 -9 2 1829 1204 254 95 6 chrX 163093370 163093718 -3556578 + MTEa LTR MaLR 1 379 0 2 1829 428 111 12 0 chrX 163094312 163094393 -3555903 + (TG)n Simple_repeat Simple_repeat 1 82 0 2 1829 494 337 66 27 chrX 163094400 163094656 -3555640 - B4A SINE B4 -19 273 8 2 1829 901 203 98 10 chrX 163095162 163095288 -3555008 - B3 SINE B2 -5 211 72 2 1829 876 36 0 0 chrX 163095288 163095400 -3554896 + (TC)n Simple_repeat Simple_repeat 2 113 0 2 1829 198 0 0 0 chrX 163095400 163095421 -3554875 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 1829 901 203 98 10 chrX 163095421 163095487 -3554809 - B3 SINE B2 -145 71 2 2 1829 491 386 50 39 chrX 163095510 163095793 -3554503 + LTR40a LTR ERVL 94 379 -140 2 1829 469 212 40 0 chrX 163095817 163095916 -3554380 + RSINE1 SINE B4 4 106 -59 2 1829 317 371 71 7 chrX 163096733 163096874 -3553422 - MER20 DNA MER1_type -69 150 1 2 1829 408 303 186 22 chrX 163097203 163097429 -3552867 + RMER15 LTR ERVL 300 562 -13 2 1829 1257 90 0 0 chrX 163097871 163098048 -3552248 + (TCTCC)n Simple_repeat Simple_repeat 3 179 0 2 1829 806 209 23 37 chrX 163098054 163098272 -3552024 - RLTR11B LTR ERVK -238 215 1 2 1829 940 281 21 34 chrX 163100612 163100903 -3549393 - B4 SINE B4 -4 288 2 2 1829 620 225 110 68 chrX 163100933 163101124 -3549172 - B3 SINE B2 -1 215 17 2 1829 355 307 92 0 chrX 163102064 163102217 -3548079 - MIR SINE MIR -8 254 88 2 1829 216 97 0 0 chrX 163103042 163103073 -3547223 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1829 317 193 29 186 chrX 163104178 163104318 -3545978 - PB1D7 SINE Alu 0 120 3 2 1829 265 322 166 6 chrX 163105080 163105261 -3545035 + MIR SINE MIR 2 211 -51 2 1829 368 236 28 19 chrX 163105867 163105975 -3544321 - ORR1E LTR MaLR -218 141 33 2 1829 833 278 5 0 chrX 163109220 163109425 -3540871 + ID_B1 SINE B4 1 206 -18 2 1829 1099 232 21 21 chrX 163109448 163109690 -3540606 + B4 SINE B4 1 242 -50 2 1829 414 0 0 0 chrX 163109740 163109786 -3540510 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1829 2061 196 37 5 chrX 163110519 163110925 -3539371 - MTD LTR MaLR 0 419 1 2 1829 905 263 96 55 chrX 163111952 163112423 -3537873 - L1MB5 LINE L1 0 6174 5685 2 1829 258 56 0 0 chrX 163112433 163112469 -3537827 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1829 452 221 57 0 chrX 163112489 163112611 -3537685 - MTE2b LTR MaLR 0 379 251 2 1829 455 292 46 17 chrX 163112759 163112933 -3537363 - B4A SINE B4 -113 179 1 2 1829 731 288 27 0 chrX 163113000 163113184 -3537112 - B3 SINE B2 -27 189 1 2 1829 435 240 145 55 chrX 163113184 163113517 -3536779 - L1MB5 LINE L1 -625 5555 5185 2 1829 245 283 141 0 chrX 163113517 163113616 -3536680 - PB1D10 SINE Alu -4 113 1 2 1829 435 217 6 115 chrX 163113616 163113668 -3536628 - L1MB5 LINE L1 -962 5184 5137 2 1829 698 239 114 25 chrX 163113890 163114092 -3536204 + ID_B1 SINE B4 5 224 0 2 1829 334 244 85 23 chrX 163114117 163114247 -3536049 + Lx7 LINE L1 7559 7696 0 2 1829 401 337 112 55 chrX 163114370 163114768 -3535528 + L2 LINE L2 2350 2757 -662 2 1829 1385 296 48 36 chrX 163114768 163115053 -3535243 - MT2A LTR ERVL -3 530 242 2 1829 210 71 0 0 chrX 163115053 163115081 -3535215 + (CAG)n Simple_repeat Simple_repeat 2 29 0 2 1829 1385 296 48 36 chrX 163115081 163115317 -3534979 - MT2A LTR ERVL -292 241 3 2 1829 401 337 112 55 chrX 163115317 163115542 -3534754 + L2 LINE L2 2758 3008 -411 2 1829 303 203 0 0 chrX 163115581 163115645 -3534651 + CT-rich Low_complexity Low_complexity 4 67 0 2 1829 349 179 163 23 chrX 163115654 163115740 -3534556 - B1_Mus2 SINE Alu -5 142 45 2 1829 324 218 126 0 chrX 163115850 163115937 -3534359 - RLTR40 LTR ERVK -719 98 1 2 1829 4048 240 79 20 chrX 163116659 163117679 -3532617 + Lx7 LINE L1 6255 7335 -361 2 1829 2419 219 92 32 chrX 163117724 163118775 -3531521 - RMER1B Other Other -5 1061 1 2 1829 467 248 50 133 chrX 163118784 163119043 -3531253 - RMER1A Other Other -776 254 3 2 1829 2141 254 75 8 chrX 163119016 163119609 -3530687 - Lx5 LINE L1 -751 6709 5862 2 1829 336 24 0 0 chrX 163119636 163119677 -3530619 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1829 193 135 19 19 chrX 163119680 163119733 -3530563 + GA-rich Low_complexity Low_complexity 2 54 0 2 1829 629 267 136 18 chrX 163119922 163120143 -3530153 + B4A SINE B4 3 249 -43 2 1829 369 0 0 0 chrX 163120167 163120208 -3530088 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1829 342 0 0 0 chrX 163120208 163120245 -3530051 + (GA)n Simple_repeat Simple_repeat 2 39 0 2 1829 222 0 25 50 chrX 163120579 163120619 -3529677 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 1829 1175 43 0 0 chrX 163120619 163120757 -3529539 - B1_Mus2 SINE Alu -8 139 2 2 1829 439 304 130 0 chrX 163120919 163121080 -3529216 + MER5A DNA MER1_type 1 182 -7 2 1829 189 0 0 0 chrX 163121405 163121426 -3528870 + (CAGC)n Simple_repeat Simple_repeat 2 22 0 2 1829 318 298 69 50 chrX 163121426 163121585 -3528711 + LTR16A1 LTR ERVL 295 456 0 2 1829 312 27 0 0 chrX 163122620 163122657 -3527639 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 1829 225 163 0 0 chrX 163122710 163122759 -3527537 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1829 568 227 30 8 chrX 163122760 163122893 -3527403 - ID_B1 SINE B4 -9 215 80 2 1829 623 246 7 14 chrX 163123306 163123454 -3526842 - B1_Mur3 SINE Alu -2 147 1 2 1829 3243 51 8 0 chrX 163123696 163124089 -3526207 + MTA_Mm LTR MaLR 1 396 0 2 1829 739 145 0 35 chrX 163124334 163124477 -3525819 - URR1A DNA MER1_type -8 218 81 2 1829 216 0 0 0 chrX 163124675 163124699 -3525597 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1829 359 179 0 43 chrX 163124717 163124787 -3525509 + ORR1D2 LTR MaLR 1 67 -303 2 1829 244 221 88 43 chrX 163125138 163125281 -3525015 - MLT1A0 LTR MaLR -4 404 214 2 1829 413 290 90 0 chrX 163125723 163125868 -3524428 - MLT1H LTR MaLR -276 273 116 2 1829 615 231 108 41 chrX 163125913 163126107 -3524189 + B3A SINE B2 9 215 -1 2 1829 656 189 15 8 chrX 163126356 163126489 -3523807 - B1_Mur1 SINE Alu -1 148 15 2 1829 298 231 120 144 chrX 163126514 163126681 -3523615 - RSINE1 SINE B4 0 165 3 2 1829 1332 263 62 8 chrX 163127435 163127791 -3522505 + MTE2b LTR MaLR 1 375 -4 2 1829 701 283 85 8 chrX 163127826 163128061 -3522235 - MLT1F1 LTR MaLR -8 561 309 2 1829 2156 162 78 15 chrX 163128357 163128752 -3521544 + MTC LTR MaLR 1 420 -1 2 1829 432 75 37 24 chrX 163128985 163129067 -3521229 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 2 1829 699 308 68 11 chrX 163129200 163129463 -3520833 + MER46C DNA MER2_type 5 282 -56 2 1829 630 244 339 5 chrX 163129687 163129905 -3520391 + B4 SINE B4 2 292 0 2 1829 345 210 115 11 chrX 163129913 163130014 -3520282 - MTE2b LTR MaLR -10 369 249 2 1829 1201 48 0 20 chrX 163130058 163130206 -3520090 + B1_Mm SINE Alu 3 147 0 2 1829 1271 273 36 22 chrX 163130545 163130908 -3519388 + MTEa LTR MaLR 1 368 -11 2 1829 237 271 0 0 chrX 163131042 163131101 -3519195 + MIR SINE MIR 78 136 -126 2 1829 690 209 65 0 chrX 163131112 163131251 -3519045 - B1_Mur2 SINE Alu -1 148 1 3 1829 683 169 16 8 chrX 163131555 163131680 -3518616 - B1_Mur1 SINE Alu 0 149 24 3 1829 358 281 49 28 chrX 163131728 163131871 -3518425 + L1MD2 LINE L1 6200 6345 -14 3 1829 358 260 57 31 chrX 163131982 163132129 -3518167 + MLT1H1 LTR MaLR 47 236 -343 3 1829 220 108 0 0 chrX 163132498 163132535 -3517761 - B4A SINE B4 -255 37 1 3 1829 324 200 29 69 chrX 163132674 163132776 -3517520 - RMER30 DNA MER1_type -2 200 103 3 1829 309 213 113 61 chrX 163133080 163133195 -3517101 - L1MA5A LINE L1 -435 5862 5742 3 1829 269 189 19 0 chrX 163133719 163133772 -3516524 - L1MA5A LINE L1 -552 5748 5695 3 1829 230 270 13 51 chrX 163133823 163133901 -3516395 - ID2 SINE ID 0 83 9 3 1829 345 284 11 0 chrX 163133908 163134003 -3516293 - RMER30 DNA MER1_type -106 96 1 3 1829 229 291 131 23 chrX 163134166 163134296 -3516000 + MLT1H1 LTR MaLR 282 425 -64 3 1829 342 0 0 0 chrX 163134635 163134673 -3515623 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1829 222 334 228 29 chrX 163135119 163135535 -3514761 + L2a LINE L2 2924 3422 -4 3 1829 480 276 35 43 chrX 163135588 163135819 -3514477 + MER33 DNA MER1_type 7 235 -89 3 1829 495 296 112 62 chrX 163135822 163135992 -3514304 + B4A SINE B4 21 210 -82 3 1829 2276 153 73 18 chrX 163135992 163136391 -3513905 - MTC LTR MaLR 0 421 1 3 1829 495 296 112 62 chrX 163136391 163136479 -3513817 + B4A SINE B4 211 292 0 3 1829 872 252 215 10 chrX 163136842 163137154 -3513142 - MTEa LTR MaLR -2 377 2 3 1829 318 337 74 0 chrX 163137691 163137881 -3512415 - L2 LINE L2 -545 2874 2671 3 1829 336 294 242 0 chrX 163137909 163138062 -3512234 - ID_B1 SINE B4 -21 203 14 3 1829 592 241 8 0 chrX 163138863 163138996 -3511300 - B1F SINE Alu -1 148 15 3 1829 476 287 26 39 chrX 163138996 163139019 -3511277 - ID_B1 SINE B4 -1 223 70 3 1829 582 280 29 24 chrX 163139483 163139688 -3510608 + RMER15 LTR ERVL 353 558 -17 3 1829 7758 44 40 0 chrX 163140390 163141341 -3508955 - L1Md_F2 LINE L1 -3 6579 5591 3 1829 252 149 0 0 chrX 163141441 163141488 -3508808 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1829 864 259 33 96 chrX 163141506 163141809 -3508487 - B4 SINE B4 -2 290 7 3 1829 237 170 0 146 chrX 163141978 163142033 -3508263 - MER20 DNA MER1_type -172 47 1 3 1829 2999 35 0 11 chrX 163142849 163143199 -3507097 + ORR1A0 LTR MaLR 1 346 0 3 1829 567 246 76 21 chrX 163143219 163143364 -3506932 - RSINE1 SINE B4 -9 156 4 3 1829 25 0 0 0 chrX 163143572 163143597 -3506699 + AT_rich Low_complexity Low_complexity 1 25 0 3 1829 1289 268 78 3 chrX 163143779 163144124 -3506172 + MTEa LTR MaLR 6 376 -3 3 1829 553 273 24 48 chrX 163145559 163145717 -3504579 - L1MA4 LINE L1 -228 5940 5779 3 1829 2226 129 145 19 chrX 163145717 163146089 -3504207 - MTC LTR MaLR -2 419 1 3 1829 553 257 22 49 chrX 163146089 163146144 -3504152 - L1MA4 LINE L1 -522 5778 5730 3 1829 263 313 115 64 chrX 163146633 163146790 -3503506 + MER21B LTR ERV1 504 668 -195 3 1829 304 263 40 0 chrX 163147795 163147871 -3502425 + MER5A1 DNA MER1_type 46 124 -42 3 1829 609 167 0 16 chrX 163148252 163148374 -3501922 - Lx9 LINE L1 0 7644 7525 3 1829 548 181 52 26 chrX 163148877 163149030 -3501266 - Lx7 LINE L1 0 7696 7540 3 1829 445 183 0 0 chrX 163149088 163149159 -3501137 - B1_Mur4 SINE Alu -58 92 22 3 1829 271 261 122 22 chrX 163149089 163149179 -3501117 - B4 SINE B4 -113 179 81 3 1829 459 0 0 0 chrX 163149852 163149903 -3500393 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1829 1012 252 105 31 chrX 163150009 163150333 -3499963 + ORR1D2 LTR MaLR 15 362 -8 3 1829 2132 83 30 7 chrX 163150375 163150677 -3499619 + RLTR27 LTR ERVK 1 309 0 3 1829 25 0 0 0 chrX 163150829 163150854 -3499442 + AT_rich Low_complexity Low_complexity 1 25 0 3 1829 267 31 0 0 chrX 163150854 163150886 -3499410 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1829 326 266 0 48 chrX 163150892 163150975 -3499321 - RSINE1 SINE B4 -18 147 69 3 1829 395 301 87 40 chrX 163151012 163151185 -3499111 + MLT1E LTR MaLR 473 653 0 3 1829 3869 107 65 0 chrX 163151198 163151768 -3498528 - Lx LINE L1 -3 6651 6045 3 1829 21 0 0 0 chrX 163152887 163152908 -3497388 + AT_rich Low_complexity Low_complexity 1 21 0 3 1829 528 280 0 0 chrX 163153228 163153346 -3496950 + ID_B1 SINE B4 107 224 0 3 1829 839 319 59 6 chrX 163153925 163154266 -3496030 + MLT1A0 LTR MaLR 7 365 0 3 1829 914 274 106 103 chrX 163154865 163155243 -3495053 - MTEa LTR MaLR 0 379 1 3 1829 193 354 5 0 chrX 163155283 163155351 -3494945 + L2b LINE L2 3225 3321 -66 3 1829 351 0 0 0 chrX 163156416 163156455 -3493841 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1829 354 260 50 0 chrX 163157223 163157323 -3492973 - MTEb LTR MaLR -243 136 32 3 1829 239 342 70 67 chrX 163157377 163157690 -3492606 - LTR37A LTR ERV1 -80 346 33 3 1829 365 351 95 0 chrX 163159844 163160012 -3490284 - MER46C DNA MER2_type -105 233 50 3 1829 405 264 66 0 chrX 163160029 163160135 -3490161 - MTEa LTR MaLR 0 379 267 3 1829 338 234 117 0 chrX 163160124 163160201 -3490095 - ID_B1 SINE B4 -55 169 84 3 1829 351 296 56 8 chrX 163161110 163161236 -3489060 - MER63D DNA AcHobo -650 411 280 3 1829 953 197 42 33 chrX 163161272 163161487 -3488809 + B4A SINE B4 44 260 -32 3 1829 1281 64 0 0 chrX 163161487 163161771 -3488525 + (CA)n Simple_repeat Simple_repeat 1 284 0 3 1829 576 273 68 74 chrX 163162336 163162660 -3487636 - MER33 DNA MER1_type -1 323 2 3 1829 262 280 85 121 chrX 163164306 163164505 -3485791 + MLT1L LTR MaLR 417 608 -2 3 1829 1957 72 0 4 chrX 163164729 163164981 -3485315 - L1_Mus1 LINE L1 0 6567 6317 3 1829 354 23 0 0 chrX 163165189 163165232 -3485064 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1829 527 280 179 4 chrX 163165256 163165496 -3484800 - MER2 DNA MER2_type -27 318 37 3 1829 502 75 211 11 chrX 163165671 163165766 -3484530 - Lx LINE L1 -2 6652 6539 3 1829 355 281 68 123 chrX 163165766 163166091 -3484205 - LTR16C LTR ERVL -72 417 111 3 1829 684 290 103 11 chrX 163166401 163166710 -3483586 + L1MC4a LINE L1 5498 5825 -2057 3 1829 1122 128 0 6 chrX 163167227 163167400 -3482896 - URR1A DNA MER1_type 0 226 55 3 1829 368 252 40 10 chrX 163167790 163167890 -3482406 + B1F SINE Alu 39 141 -8 3 1829 260 344 21 0 chrX 163167910 163168006 -3482290 + BC1_Mm scRNA scRNA 14 111 -41 3 1829 910 189 200 0 chrX 163168074 163168254 -3482042 + B3 SINE B2 1 216 0 3 1829 498 239 62 57 chrX 163168267 163168289 -3482007 + L1M5 LINE L1 5423 5442 -722 3 1829 2356 93 55 0 chrX 163168289 163168599 -3481697 + ORR1A2 LTR MaLR 1 327 0 3 1829 498 239 62 57 chrX 163168599 163168753 -3481543 + L1M5 LINE L1 5443 5600 -564 3 1829 243 291 99 25 chrX 163170616 163170778 -3479518 - Tigger13a DNA MER2_type -570 201 28 3 1829 394 265 195 16 chrX 163170865 163171183 -3479113 - L1MA9 LINE L1 -6 6306 5920 3 1829 450 343 80 108 chrX 163171263 163171587 -3478709 - ORR1E LTR MaLR -4 355 41 3 1829 595 205 59 20 chrX 163171676 163171880 -3478416 - Lx9 LINE L1 -1 7643 7432 3 1829 589 194 20 46 chrX 163171925 163172076 -3478220 - Lx9 LINE L1 -128 7516 7370 3 1829 272 196 0 0 chrX 163172317 163172368 -3477928 + 5S rRNA rRNA 40 90 -31 3 1829 39056 11 2 8 chrX 163173441 163178885 -3471411 + L1Md_A LINE L1 178 5586 -297 3 1829 9326 15 2 0 chrX 163178885 163179879 -3470417 + L1Md_A LINE L1 5587 6582 0 3 1829 39056 9 0 1 chrX 163179879 163179895 -3470401 + L1Md_A LINE L1 5587 5602 -281 3 1829 1429 206 66 46 chrX 163180019 163180290 -3470006 + ORR1D1 LTR MaLR 21 308 -66 3 1829 953 17 0 9 chrX 163180290 163180406 -3469890 + (TTC)n Simple_repeat Simple_repeat 3 117 0 3 1829 1429 206 66 46 chrX 163180406 163180439 -3469857 + ORR1D1 LTR MaLR 309 337 -37 3 1829 1076 118 0 5 chrX 163180439 163180644 -3469652 + (TTTC)n Simple_repeat Simple_repeat 1 203 0 3 1829 1429 206 66 46 chrX 163180644 163180684 -3469612 + ORR1D1 LTR MaLR 338 373 -1 3 1829 1314 226 31 39 chrX 163180829 163181115 -3469181 + B4A SINE B4 3 286 -6 3 1829 2849 81 5 13 chrX 163181194 163181592 -3468704 + MTB LTR MaLR 6 400 0 3 1829 1319 86 6 6 chrX 163182127 163182302 -3467994 - B2_Mm2 SINE B2 -19 176 2 3 1829 346 290 29 29 chrX 163182382 163182485 -3467811 - PB1D10 SINE Alu 0 117 15 3 1829 576 106 0 0 chrX 163183216 163183301 -3466995 + (TG)n Simple_repeat Simple_repeat 1 85 0 3 1829 526 227 66 25 chrX 163183649 163183771 -3466525 - MER20 DNA MER1_type 0 219 93 3 1829 402 220 68 0 chrX 163183767 163183885 -3466411 + MER53 DNA hAT 63 188 -5 3 1829 868 261 102 84 chrX 163183966 163184024 -3466272 - B4 SINE B4 -1 291 241 3 1829 207 0 0 0 chrX 163184024 163184047 -3466249 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 3 1829 868 261 102 84 chrX 163184047 163184272 -3466024 - B4 SINE B4 -52 240 5 3 1830 825 256 42 15 chrX 163184787 163185019 -3465277 + Lx7 LINE L1 6122 6337 -1123 3 1830 333 301 32 8 chrX 163185001 163185125 -3465171 + Lx7 LINE L1 7167 7293 -403 3 1830 21 0 0 0 chrX 163185275 163185296 -3465000 + AT_rich Low_complexity Low_complexity 1 21 0 3 1830 195 139 0 0 chrX 163185494 163185530 -3464766 + (TCTG)n Simple_repeat Simple_repeat 4 39 0 3 1830 1593 243 57 63 chrX 163185541 163186176 -3464120 + L1_Mur3 LINE L1 5130 5801 -499 3 1830 961 172 193 6 chrX 163186270 163186451 -3463845 - B3 SINE B2 0 216 2 3 1830 348 250 102 20 chrX 163186752 163186850 -3463446 + PB1D10 SINE Alu 6 111 -6 3 1830 465 19 0 0 chrX 163187523 163187577 -3462719 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 1830 288 0 0 0 chrX 163187577 163187608 -3462688 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1830 423 0 0 0 chrX 163187608 163187654 -3462642 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 1830 220 348 34 0 chrX 163188657 163188746 -3461550 - MIRb SINE MIR -121 147 56 4 1830 725 333 52 3 chrX 163188746 163189053 -3461243 + MER58B DNA MER1_type 17 338 -3 4 1830 582 246 8 23 chrX 163189299 163189428 -3460868 - B1_Mur1 SINE Alu -5 144 18 4 1830 26 64 0 0 chrX 163189565 163189612 -3460684 + AT_rich Low_complexity Low_complexity 1 47 0 4 1830 1211 260 20 3 chrX 163189777 163190074 -3460222 + Lx8 LINE L1 6968 7269 -204 4 1830 236 236 0 0 chrX 163190084 163190139 -3460157 + RMER15 LTR ERVL 416 470 -105 4 1830 201 273 0 22 chrX 163190793 163190883 -3459413 + (TTA)n Simple_repeat Simple_repeat 1 88 0 4 1830 2450 130 20 51 chrX 163191001 163191391 -3458905 - ORR1C1 LTR MaLR 0 378 1 4 1830 657 285 159 53 chrX 163191555 163191781 -3458515 - B4A SINE B4 0 292 43 4 1830 1434 82 0 6 chrX 163192106 163192289 -3458007 - B2_Mm2 SINE B2 -11 184 3 4 1830 283 74 18 36 chrX 163192314 163192370 -3457926 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 4 1830 433 208 14 0 chrX 163192429 163192501 -3457795 - ID4_ SINE ID -8 75 3 4 1830 364 276 33 33 chrX 163192529 163192679 -3457617 - L1M5 LINE L1 -638 5806 5657 4 1830 816 336 50 12 chrX 163193392 163194078 -3456218 - L1M5 LINE L1 -519 5645 4939 4 1830 462 36 0 0 chrX 163194085 163194141 -3456155 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 1830 892 276 20 5 chrX 163194141 163194341 -3455955 + ID_B1 SINE B4 3 205 -19 4 1830 265 181 21 31 chrX 163195172 163195269 -3455027 + GA-rich Low_complexity Low_complexity 3 98 0 4 1830 576 284 0 115 chrX 163195690 163195881 -3454415 - B4 SINE B4 -1 291 123 4 1830 1683 253 106 16 chrX 163195905 163196339 -3453957 + Lx9 LINE L1 7039 7513 -131 4 1830 423 0 0 0 chrX 163196339 163196386 -3453910 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1830 1683 253 106 16 chrX 163196386 163196498 -3453798 + Lx9 LINE L1 7514 7633 -11 4 1830 3578 277 42 3 chrX 163196551 163197485 -3452811 - Lx8 LINE L1 -151 7322 6353 4 1830 321 348 22 0 chrX 163197487 163197579 -3452717 - B4 SINE B4 -197 95 2 4 1830 686 234 80 62 chrX 163197630 163197904 -3452392 - MER33 DNA MER1_type -23 301 23 4 1830 580 260 7 30 chrX 163197993 163198128 -3452168 + ID_B1 SINE B4 84 215 -9 4 1830 1415 171 14 0 chrX 163199576 163199798 -3450498 + URR1B DNA MER1_type 1 225 0 4 1830 1444 90 0 59 chrX 163200327 163200563 -3449733 + RMER17C-int LTR ERVK 2272 2493 -745 4 1830 425 133 13 0 chrX 163200564 163200639 -3449657 + (TA)n Simple_repeat Simple_repeat 1 76 0 4 1830 4346 122 53 17 chrX 163200639 163201354 -3448942 + RMER17C-int LTR ERVK 2498 3238 0 4 1830 1171 194 63 142 chrX 163201354 163201799 -3448497 + RMER17C LTR ERVK 1 410 0 4 1830 1367 269 32 24 chrX 163202203 163202577 -3447719 + MTEa LTR MaLR 1 377 -2 4 1830 1398 209 91 39 chrX 163202721 163203084 -3447212 + RLTR14 LTR ERV1 1 382 0 4 1830 1310 252 43 12 chrX 163203113 163203439 -3446857 + Lx7 LINE L1 6758 7093 -603 4 1830 656 336 29 18 chrX 163205354 163205593 -3444703 + B4A SINE B4 13 252 -40 4 1830 198 0 0 0 chrX 163205593 163205615 -3444681 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 1830 656 336 29 18 chrX 163205615 163205648 -3444648 + B4A SINE B4 253 288 -4 4 1830 303 316 11 0 chrX 163206036 163206131 -3444165 + L2b LINE L2 3277 3372 -3 4 1830 4086 79 43 13 chrX 163207017 163207555 -3442741 - L1_Mus1 LINE L1 0 6567 6014 4 1830 347 307 82 51 chrX 163207844 163208002 -3442294 + MER74A LTR ERVL 396 558 0 4 1830 1059 244 0 5 chrX 163208560 163208770 -3441526 - B3 SINE B2 -5 211 3 4 1830 22 0 0 0 chrX 163208811 163208833 -3441463 + AT_rich Low_complexity Low_complexity 1 22 0 4 1830 911 70 0 66 chrX 163208840 163208977 -3441319 - B1_Mus1 SINE Alu 0 148 21 4 1830 234 67 0 0 chrX 163209408 163209438 -3440858 - L1MC4 LINE L1 -1082 6960 6931 4 1830 213 39 0 0 chrX 163209629 163209655 -3440641 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 1830 691 69 20 0 chrX 163209657 163209759 -3440537 + (GA)n Simple_repeat Simple_repeat 1 104 0 4 1830 748 269 281 12 chrX 163210432 163210847 -3439449 + MLT1F LTR MaLR 11 536 -12 4 1830 818 20 0 10 chrX 163211903 163212004 -3438292 + (TTTTC)n Simple_repeat Simple_repeat 1 100 0 4 1830 1217 81 11 0 chrX 163212025 163212199 -3438097 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 4 1830 234 0 0 0 chrX 163212448 163212474 -3437822 + (TC)n Simple_repeat Simple_repeat 1 26 0 4 1830 375 264 86 70 chrX 163212620 163212663 -3437633 + MER3 DNA MER1_type 17 52 -157 4 1830 194 91 0 29 chrX 163212663 163212697 -3437599 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 4 1830 375 264 86 70 chrX 163212697 163212840 -3437456 + MER3 DNA MER1_type 53 206 -3 4 1830 258 186 203 0 chrX 163212915 163212974 -3437322 + MIRb SINE MIR 57 127 -141 4 1830 219 400 0 0 chrX 163213175 163213250 -3437046 - ID4_ SINE ID 0 83 9 4 1830 519 267 131 21 chrX 163213857 163214048 -3436248 + MER20 DNA MER1_type 8 219 0 4 1830 1368 226 23 97 chrX 163214146 163214631 -3435665 - L1_Mur3 LINE L1 -6388 1324 876 4 1830 513 32 0 0 chrX 163216105 163216168 -3434128 + (CCAA)n Simple_repeat Simple_repeat 2 64 0 4 1830 396 0 0 0 chrX 163216179 163216223 -3434073 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1830 564 209 286 17 chrX 163216289 163216464 -3433832 - ID_B1 SINE B4 -1 223 2 4 1830 286 345 9 0 chrX 163216490 163216603 -3433693 + L1M5 LINE L1 4996 5109 -1037 4 1830 256 268 0 0 chrX 163216631 163216687 -3433609 - ID SINE ID -168 56 1 4 1830 363 96 19 0 chrX 163217064 163217116 -3433180 + (TCCC)n Simple_repeat Simple_repeat 1 53 0 4 1830 775 161 13 4 chrX 163217116 163217342 -3432954 + CT-rich Low_complexity Low_complexity 1 228 0 4 1830 33 66 0 0 chrX 163218377 163218438 -3431858 + AT_rich Low_complexity Low_complexity 1 61 0 4 1830 333 0 0 0 chrX 163218619 163218656 -3431640 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1830 597 14 0 0 chrX 163218900 163218970 -3431326 + (TTTTA)n Simple_repeat Simple_repeat 5 74 0 4 1830 1295 168 5 0 chrX 163218973 163219169 -3431127 - B3 SINE B2 -19 197 1 4 1830 269 89 0 22 chrX 163219391 163219437 -3430859 + (TTA)n Simple_repeat Simple_repeat 2 46 0 4 1830 1883 149 7 21 chrX 163219444 163219732 -3430564 - Lx3C LINE L1 -7 6969 6686 4 1830 767 275 15 10 chrX 163219847 163220042 -3430254 + RMER30 DNA MER1_type 1 196 -6 4 1830 272 301 114 90 chrX 163221998 163222199 -3428097 - MT2B2 LTR ERVL -204 380 175 4 1830 952 137 0 0 chrX 163222066 163222205 -3428091 - B1_Mur4 SINE Alu -6 144 6 4 1830 286 310 16 66 chrX 163223430 163223551 -3426745 + L3 LINE CR1 3963 4077 -412 4 1830 357 43 0 0 chrX 163223563 163223610 -3426686 + (A)n Simple_repeat Simple_repeat 1 47 0 4 1830 837 250 122 60 chrX 163223918 163224220 -3426076 + RMER5 LTR ERV1 2 322 -212 4 1830 252 86 0 0 chrX 163224220 163224255 -3426041 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 1830 667 253 73 0 chrX 163224258 163224408 -3425888 - B3A SINE B2 -36 162 2 4 1830 961 212 19 15 chrX 163224408 163224611 -3425685 + RMER5 LTR ERV1 331 534 0 4 1830 762 106 0 0 chrX 163224918 163225050 -3425246 + (GA)n Simple_repeat Simple_repeat 1 132 0 4 1830 3862 116 7 2 chrX 163225251 163225796 -3424500 + Lx4A LINE L1 6509 7056 -2 4 1830 517 277 7 21 chrX 163225818 163225958 -3424338 + B1F SINE Alu 1 138 -11 4 1830 920 257 4 49 chrX 163226005 163226230 -3424066 + ID_B1 SINE B4 8 222 -2 4 1830 1049 176 80 10 chrX 163226377 163226578 -3423718 + B3 SINE B2 2 216 0 4 1830 852 147 0 0 chrX 163227655 163227805 -3422491 + (GA)n Simple_repeat Simple_repeat 2 151 0 4 1830 343 266 0 25 chrX 163228646 163228727 -3421569 - ID4_ SINE ID -3 80 2 4 1830 325 278 80 36 chrX 163228741 163228853 -3421443 - PB1D10 SINE Alu 0 117 1 4 1830 339 215 25 25 chrX 163229524 163229605 -3420691 - ID4_ SINE ID -1 82 2 4 1830 28 0 0 0 chrX 163229636 163229664 -3420632 + AT_rich Low_complexity Low_complexity 1 28 0 4 1830 1327 302 43 12 chrX 163229665 163230158 -3420138 - Lx8 LINE L1 -6 7467 6960 4 1830 1072 122 0 0 chrX 163230168 163230324 -3419972 - ORR1B1 LTR MaLR 0 394 239 4 1830 2195 188 86 7 chrX 163230322 163230777 -3419519 + RMER17B LTR ERVK 373 863 -95 4 1830 1063 134 98 105 chrX 163230755 163231021 -3419275 - ORR1B1 LTR MaLR -130 264 1 4 1830 2042 280 139 32 chrX 163231037 163231715 -3418581 - Lx8 LINE L1 -523 6950 6179 4 1830 402 74 0 0 chrX 163231715 163231769 -3418527 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1830 2042 280 139 32 chrX 163231769 163232218 -3418078 - Lx8 LINE L1 -1295 6178 5702 4 1830 457 363 48 72 chrX 163232274 163232692 -3417604 + MLT1A1 LTR MaLR 1 408 0 4 1830 567 292 25 0 chrX 163234056 163234217 -3416079 - MER58A DNA MER1_type -15 209 45 4 1830 475 298 35 0 chrX 163234243 163234384 -3415912 + MER5B DNA MER1_type 7 152 -26 4 1830 233 286 0 0 chrX 163234504 163234567 -3415729 - Charlie17a DNA MER1_type -125 94 32 4 1830 1122 78 0 0 chrX 163234735 163234876 -3415420 - B1_Mus2 SINE Alu -6 141 1 4 1830 687 269 154 53 chrX 163236297 163236674 -3413622 + RMER5 LTR ERV1 1 415 -119 4 1830 1089 173 5 11 chrX 163236658 163236845 -3413451 - URR1B DNA MER1_type -39 186 1 4 1830 205 277 0 30 chrX 163237151 163237218 -3413078 + GA-rich Low_complexity Low_complexity 1 65 0 4 1830 229 359 29 10 chrX 163237478 163237582 -3412714 - L1ME2 LINE L1 -93 6086 5981 4 1830 559 259 20 40 chrX 163237615 163237764 -3412532 - B1_Mm SINE Alu -1 146 1 4 1830 488 274 59 10 chrX 163237836 163238039 -3412257 - L1ME2 LINE L1 -302 5862 5650 4 1830 421 231 26 69 chrX 163238152 163238268 -3412028 - LTR16E1 LTR ERVL -5 533 423 4 1830 387 0 0 0 chrX 163238310 163238353 -3411943 + (TC)n Simple_repeat Simple_repeat 1 43 0 4 1830 387 316 58 0 chrX 163238381 163238520 -3411776 - LTR16E1 LTR ERVL -243 295 149 4 1830 322 359 97 7 chrX 163238723 163238877 -3411419 - L1ME2 LINE L1 -484 5640 5473 4 1830 341 257 54 98 chrX 163239466 163239578 -3410718 + ID_B1 SINE B4 1 107 -117 4 1830 417 20 0 0 chrX 163239579 163239629 -3410667 + (TTA)n Simple_repeat Simple_repeat 2 51 0 4 1830 5572 142 85 6 chrX 163239629 163240536 -3409760 - Lx4A LINE L1 -5 7053 6075 4 1830 2238 80 0 3 chrX 163240536 163240851 -3409445 + Lx4A LINE L1 5711 6024 -1034 4 1830 214 281 106 77 chrX 163240851 163240874 -3409422 + PB1D10 SINE Alu 11 117 0 4 1830 395 225 62 12 chrX 163240874 163240955 -3409341 + ID_B1 SINE B4 140 224 0 4 1830 583 176 16 0 chrX 163240961 163241086 -3409210 + GA-rich Low_complexity Low_complexity 3 129 0 5 1830 180 77 0 0 chrX 163241387 163241413 -3408883 + (CCCCCA)n Simple_repeat Simple_repeat 4 29 0 5 1830 395 214 70 171 chrX 163241750 163241908 -3408388 - B1_Mur1 SINE Alu -7 142 1 5 1830 180 111 0 0 chrX 163241916 163241943 -3408353 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 5 1830 301 311 72 26 chrX 163244864 163245016 -3405280 + L1M5 LINE L1 4531 4689 -1457 5 1830 450 0 0 0 chrX 163245654 163245704 -3404592 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1830 451 337 88 75 chrX 163246002 163246364 -3403932 - MLT2B3 LTR ERVL -75 642 276 5 1830 464 288 17 0 chrX 163246437 163246555 -3403741 - B1F1 SINE Alu -6 143 24 5 1830 346 243 0 0 chrX 163247915 163247989 -3402307 - B3A SINE B2 -124 74 1 5 1830 3615 143 47 2 chrX 163248513 163249110 -3401186 + Lx2 LINE L1 6374 6997 0 5 1830 265 250 18 0 chrX 163250028 163250084 -3400212 - ID4 SINE ID -26 57 1 5 1830 222 118 0 0 chrX 163250099 163250133 -3400163 + (CCCCCT)n Simple_repeat Simple_repeat 1 34 0 5 1830 347 231 176 0 chrX 163250149 163250240 -3400056 - PB1D9 SINE Alu -10 110 4 5 1830 428 277 35 9 chrX 163250385 163250615 -3399681 - Lx8 LINE L1 -1570 5903 5633 5 1830 527 252 52 24 chrX 163251381 163251592 -3398704 - L1M3 LINE L1 -943 5197 4981 5 1830 6086 72 2 16 chrX 163251593 163252458 -3397838 + L1_Mus1 LINE L1 5714 6566 -1 5 1830 375 260 72 9 chrX 163252475 163252651 -3397645 - L1M3 LINE L1 -1163 4977 4790 5 1830 600 245 164 30 chrX 163252725 163253172 -3397124 + L1MA9 LINE L1 5738 6312 0 5 1830 282 288 50 0 chrX 163253547 163253627 -3396669 - MER20 DNA MER1_type -105 114 31 5 1830 324 260 78 0 chrX 163254700 163254777 -3395519 - MER94 DNA AcHobo -4 130 48 5 1830 195 296 127 18 chrX 163254831 163254941 -3395355 + L2a LINE L2 3305 3426 0 5 1830 562 234 78 20 chrX 163255046 163255309 -3394987 + L1MA4 LINE L1 5642 5893 -1580 5 1830 22 35 0 0 chrX 163255315 163255344 -3394952 + AT_rich Low_complexity Low_complexity 1 29 0 5 1830 460 194 235 50 chrX 163255806 163255985 -3394311 - B3 SINE B2 0 216 5 5 1830 369 0 0 0 chrX 163256329 163256370 -3393926 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 5 1830 263 191 0 7 chrX 163256373 163256434 -3393862 - B1_Mus2 SINE Alu 0 147 89 5 1830 953 136 60 43 chrX 163256449 163256634 -3393662 - Lx3C LINE L1 -2 6974 6787 5 1830 22 35 0 0 chrX 163256651 163256680 -3393616 + AT_rich Low_complexity Low_complexity 1 29 0 5 1830 2027 100 30 13 chrX 163258013 163258318 -3391978 - Lx2B LINE L1 -426 6574 6265 5 1830 2725 140 20 5 chrX 163258318 163258757 -3391539 + Lx2B LINE L1 6551 6996 -4 5 1830 183 80 0 0 chrX 163259396 163259421 -3390875 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1830 458 326 29 7 chrX 163259421 163259560 -3390736 + B1F1 SINE Alu 6 147 -2 5 1830 270 326 11 0 chrX 163260819 163260908 -3389388 + Lx8 LINE L1 7165 7254 -219 5 1830 34710 42 6 15 chrX 163262449 163267616 -3382680 + L1Md_A LINE L1 468 5586 -297 5 1830 8548 30 0 0 chrX 163267616 163268612 -3381684 + L1Md_A LINE L1 5587 6582 0 5 1830 24 0 0 0 chrX 163271383 163271407 -3378889 + AT_rich Low_complexity Low_complexity 1 24 0 5 1830 2098 240 95 3 chrX 163272077 163272696 -3377600 + Lx5 LINE L1 5688 6363 -687 5 1830 1363 306 69 23 chrX 163272729 163273250 -3377046 + Lx5 LINE L1 6506 7050 0 5 1830 42 0 0 0 chrX 163274154 163274196 -3376100 + AT_rich Low_complexity Low_complexity 1 42 0 5 1830 430 255 63 9 chrX 163276137 163276248 -3374048 + B1F1 SINE Alu 9 125 -24 5 1830 23 78 0 0 chrX 163276829 163276880 -3373416 + AT_rich Low_complexity Low_complexity 1 51 0 5 1830 6927 129 109 12 chrX 163276880 163278076 -3372220 - Lx4A LINE L1 0 7058 5747 5 1830 1060 196 47 0 chrX 163278339 163278553 -3371743 + URR1B DNA MER1_type 2 225 0 5 1830 267 217 0 0 chrX 163279247 163279307 -3370989 + (TA)n Simple_repeat Simple_repeat 1 60 0 5 1830 260 199 228 20 chrX 163279307 163279359 -3370937 + Lx9 LINE L1 7458 7515 -129 5 1830 231 36 0 0 chrX 163279359 163279387 -3370909 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1830 260 199 228 20 chrX 163279387 163279483 -3370813 + Lx9 LINE L1 7516 7636 -8 5 1830 558 258 8 0 chrX 163280016 163280144 -3370152 + Lx8 LINE L1 6191 6319 -1154 5 1830 663 291 88 21 chrX 163280150 163280389 -3369907 + Lx8 LINE L1 6821 7075 -398 5 1830 652 222 134 46 chrX 163280577 163280771 -3369525 - B3 SINE B2 -5 211 1 5 1830 473 264 133 13 chrX 163280828 163280978 -3369318 + Lx8 LINE L1 7247 7414 -59 5 1830 707 314 61 34 chrX 163281506 163281803 -3368493 - RMER15 LTR ERVL 0 575 271 5 1830 304 252 83 38 chrX 163281816 163281904 -3368392 - RMER15 LTR ERVL -437 138 49 5 1830 279 0 0 0 chrX 163281904 163281935 -3368361 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 5 1830 304 252 83 38 chrX 163281935 163281978 -3368318 - RMER15 LTR ERVL -527 48 2 5 1830 269 143 92 31 chrX 163285793 163285858 -3364438 - MTD LTR MaLR 0 419 351 5 1830 456 135 0 0 chrX 163286694 163286768 -3363528 + (TA)n Simple_repeat Simple_repeat 2 75 0 5 1830 273 280 39 29 chrX 163287399 163287502 -3362794 + PB1D10 SINE Alu 13 116 -1 5 1830 290 294 0 0 chrX 163287514 163287582 -3362714 + ID4_ SINE ID 2 69 -14 5 1830 476 298 69 0 chrX 163290078 163290209 -3360087 + ID_B1 SINE B4 84 223 -1 5 1830 813 239 30 0 chrX 163290943 163291110 -3359186 + MTEa LTR MaLR 8 179 -200 5 1830 23 33 0 0 chrX 163292965 163292995 -3357301 + AT_rich Low_complexity Low_complexity 1 30 0 5 1830 1536 183 103 25 chrX 163295995 163296315 -3353981 + MTC LTR MaLR 1 345 -76 5 1830 1253 189 42 9 chrX 163296320 163296606 -3353690 - ORR1B1 LTR MaLR 0 326 1 5 1830 326 164 0 69 chrX 163296608 163296680 -3353616 + MTC LTR MaLR 345 411 -8 5 1830 1315 360 65 38 chrX 163297281 163297633 -3352663 + Lx9 LINE L1 5817 6173 -1300 5 1830 495 73 0 0 chrX 163297633 163297701 -3352595 + (TATG)n Simple_repeat Simple_repeat 1 68 0 5 1830 2887 278 24 19 chrX 163297701 163298557 -3351739 + Lx9 LINE L1 6174 7190 -454 5 1830 4029 223 70 7 chrX 163298561 163298745 -3351551 - Lx9 LINE L1 -414 7230 7043 5 1830 321 26 0 0 chrX 163298745 163298783 -3351513 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 5 1830 4029 223 70 7 chrX 163298783 163299479 -3350817 - Lx9 LINE L1 -602 7042 6294 5 1830 575 262 62 37 chrX 163299534 163299776 -3350520 - Lx9 LINE L1 -1562 6082 5835 5 1830 1260 207 26 19 chrX 163300117 163300383 -3349913 - Lx6 LINE L1 -5 7455 7188 5 1830 182 130 65 0 chrX 163300395 163300441 -3349855 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 5 1830 253 288 192 0 chrX 163300450 163300523 -3349773 + PB1 SINE Alu 13 99 -28 5 1830 321 39 78 0 chrX 163300523 163300574 -3349722 + B2_Mm1t SINE B2 134 188 -5 5 1830 449 229 21 0 chrX 163301202 163301298 -3348998 + MTD LTR MaLR 21 118 -301 5 1830 1017 172 103 5 chrX 163302529 163302733 -3347563 + URR1A DNA MER1_type 1 224 -2 5 1830 279 305 60 15 chrX 163303411 163303544 -3346752 + B1F1 SINE Alu 3 141 -8 5 1830 419 143 0 0 chrX 163303586 163303649 -3346647 + B1_Mur4 SINE Alu 14 76 -74 5 1830 306 0 0 0 chrX 163304049 163304083 -3346213 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1830 384 185 28 39 chrX 163305200 163305380 -3344916 + GA-rich Low_complexity Low_complexity 1 178 0 5 1830 1320 161 9 5 chrX 163306638 163306862 -3343434 + URR1A DNA MER1_type 2 226 0 5 1830 25 65 0 0 chrX 163307228 163307274 -3343022 + AT_rich Low_complexity Low_complexity 1 46 0 5 1830 198 0 0 0 chrX 163308085 163308107 -3342189 + (CAA)n Simple_repeat Simple_repeat 2 23 0 5 1830 686 239 7 0 chrX 163308911 163309049 -3341247 + ID_B1 SINE B4 82 220 -4 5 1830 186 43 0 0 chrX 163309784 163309807 -3340489 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 5 1830 260 319 14 0 chrX 163309847 163309915 -3340381 + B1F2 SINE Alu 47 115 -34 5 1830 484 231 11 0 chrX 163309915 163310006 -3340290 + URR1B DNA MER1_type 1 92 -133 5 1830 1261 271 135 53 chrX 163310716 163311351 -3338945 - Lx9 LINE L1 -36 7608 6922 5 1830 2313 160 22 5 chrX 163311366 163311780 -3338516 - Lx5 LINE L1 -935 6115 5695 5 1831 339 346 109 18 chrX 163316294 163316459 -3333837 + MER63A DNA AcHobo 25 204 -6 5 1831 665 259 12 18 chrX 163316626 163316795 -3333501 + B3A SINE B2 1 168 -30 5 1831 729 157 145 76 chrX 163317046 163317218 -3333078 - ORR1B2 LTR MaLR -182 185 2 5 1831 1977 171 3 60 chrX 163317218 163317581 -3332715 - ORR1C1 LTR MaLR -36 342 1 5 1831 377 341 24 24 chrX 163317759 163317885 -3332411 + ID_B1 SINE B4 83 208 -16 5 1831 1356 245 76 18 chrX 163317888 163318229 -3332067 + MTD LTR MaLR 3 363 -56 5 1831 1323 269 25 38 chrX 163318453 163318666 -3331630 - MTE2b LTR MaLR -17 362 146 5 1831 291 54 0 0 chrX 163318666 163318703 -3331593 + (CATA)n Simple_repeat Simple_repeat 4 40 0 5 1831 1323 269 25 38 chrX 163318703 163318856 -3331440 - MTE2b LTR MaLR -234 145 1 5 1831 2033 239 25 65 chrX 163318859 163319495 -3330801 - RMER19C LTR ERVK 0 611 1 5 1831 692 258 53 5 chrX 163320926 163321113 -3329183 - B3A SINE B2 0 198 3 5 1831 387 0 0 0 chrX 163322114 163322157 -3328139 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 1831 211 290 164 39 chrX 163322174 163322278 -3328018 + PB1D10 SINE Alu 1 117 0 5 1831 585 284 7 0 chrX 163322298 163322439 -3327857 + B1_Mur1 SINE Alu 2 143 -6 5 1831 269 316 8 50 chrX 163322446 163322566 -3327730 + BC1_Mm scRNA scRNA 7 121 -31 5 1831 420 316 91 81 chrX 163322635 163322845 -3327451 - MER20 DNA MER1_type 0 219 8 5 1831 361 344 0 16 chrX 163322884 163323008 -3327288 + B1F SINE Alu 23 144 -5 5 1831 1032 189 28 40 chrX 163323229 163323477 -3326819 - RMER16 LTR ERVK 0 533 289 5 1831 304 156 34 125 chrX 163323580 163323668 -3326628 - RMER16 LTR ERVK -452 81 2 5 1831 21 36 0 0 chrX 163324749 163324777 -3325519 + AT_rich Low_complexity Low_complexity 1 28 0 5 1831 5990 174 61 23 chrX 163326443 163327383 -3322913 + Lx9 LINE L1 6362 7347 -297 5 1831 5282 82 3 0 chrX 163327383 163328095 -3322201 + L1_Mus3 LINE L1 5925 6638 0 5 1831 5990 174 61 23 chrX 163328095 163328341 -3321955 + Lx9 LINE L1 7348 7593 -51 5 1831 315 302 99 13 chrX 163328821 163328972 -3321324 - L1MC4 LINE L1 -469 7573 7410 5 1831 405 0 0 0 chrX 163329301 163329346 -3320950 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1831 279 93 0 0 chrX 163331358 163331401 -3318895 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1831 413 347 25 25 chrX 163331430 163331551 -3318745 - RSINE1 SINE B4 -43 122 2 6 1831 634 284 7 0 chrX 163331666 163331807 -3318489 + B3 SINE B2 3 144 -72 6 1831 402 202 101 46 chrX 163331828 163331937 -3318359 + MER34 LTR ERV1 375 518 -53 6 1831 216 325 117 0 chrX 163331956 163332033 -3318263 + MER5A DNA MER1_type 10 95 -94 6 1831 270 0 0 0 chrX 163332189 163332219 -3318077 + (TC)n Simple_repeat Simple_repeat 2 31 0 6 1831 27 29 0 0 chrX 163332623 163332657 -3317639 + AT_rich Low_complexity Low_complexity 1 34 0 6 1831 396 0 0 0 chrX 163332657 163332701 -3317595 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1831 452 266 180 0 chrX 163332707 163332835 -3317461 - RSINE1 SINE B4 -13 152 2 6 1831 1526 266 113 7 chrX 163333368 163333951 -3316345 + Lx8 LINE L1 6810 7454 -19 6 1831 529 266 34 48 chrX 163334042 163334188 -3316108 - ID_B1 SINE B4 -9 215 72 6 1831 4251 137 72 97 chrX 163334260 163335189 -3315107 + RMER17A2 LTR ERVK 1 906 0 6 1831 225 94 0 0 chrX 163335691 163335723 -3314573 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1831 576 0 0 0 chrX 163335745 163335809 -3314487 + (TA)n Simple_repeat Simple_repeat 1 64 0 6 1831 2307 134 5 39 chrX 163336089 163336470 -3313826 - ORR1C1 LTR MaLR -10 368 1 6 1831 216 0 0 0 chrX 163337097 163337121 -3313175 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 1831 853 313 83 36 chrX 163337209 163337495 -3312801 - RMER5 LTR ERV1 -42 492 200 6 1831 1033 150 129 10 chrX 163337495 163337697 -3312599 - URR1A DNA MER1_type 0 226 1 6 1831 853 313 83 36 chrX 163337697 163337880 -3312416 - RMER5 LTR ERV1 -335 199 1 6 1831 2740 155 29 41 chrX 163338181 163338698 -3311598 - RLTR11A2 LTR ERVK 0 527 17 6 1831 503 264 8 8 chrX 163339532 163339654 -3310642 + ID_B1 SINE B4 96 217 -7 6 1831 267 114 0 0 chrX 163339944 163339988 -3310308 + (TATG)n Simple_repeat Simple_repeat 3 46 0 6 1831 937 128 14 7 chrX 163339994 163340136 -3310160 - B1_Mur1 SINE Alu 0 149 7 6 1831 468 0 0 0 chrX 163340147 163340199 -3310097 + (TTCC)n Simple_repeat Simple_repeat 1 52 0 6 1831 557 83 12 0 chrX 163340200 163340284 -3310012 + (TCC)n Simple_repeat Simple_repeat 3 87 0 6 1831 1092 108 0 0 chrX 163340284 163340432 -3309864 - B1_Mus1 SINE Alu 0 148 1 6 1831 468 250 25 111 chrX 163340443 163340605 -3309691 - B1F2 SINE Alu -1 148 1 6 1831 1082 178 10 10 chrX 163340627 163340820 -3309476 - MTD LTR MaLR -226 193 1 6 1831 271 271 0 14 chrX 163340904 163340975 -3309321 + GA-rich Low_complexity Low_complexity 1 70 0 6 1831 378 0 0 0 chrX 163341242 163341284 -3309012 + (TA)n Simple_repeat Simple_repeat 1 42 0 6 1831 255 303 48 57 chrX 163341828 163341933 -3308363 + ORR1E LTR MaLR 1 104 -255 6 1831 439 341 112 13 chrX 163342106 163342338 -3307958 - MLT1I LTR MaLR -156 255 1 6 1831 2038 172 3 0 chrX 163342770 163343153 -3307143 - L1_Mur1 LINE L1 -389 5497 5114 6 1831 1512 160 7 7 chrX 163343151 163343428 -3306868 + Lx3C LINE L1 6576 6852 -124 6 1831 690 304 20 10 chrX 163343518 163343714 -3306582 - ID_B1 SINE B4 -20 204 7 6 1831 1310 24 12 0 chrX 163343766 163343930 -3306366 + L1Md_F2 LINE L1 6413 6578 -4 6 1831 527 282 119 20 chrX 163343944 163344065 -3306231 - Lx9 LINE L1 -7 7637 7514 6 1831 228 35 0 0 chrX 163344065 163344094 -3306202 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 1831 527 282 119 20 chrX 163344094 163344326 -3305970 - Lx9 LINE L1 -131 7513 7251 6 1831 282 217 274 32 chrX 163344327 163344422 -3305874 - PB1D7 SINE Alu -2 118 1 6 1831 27 29 0 0 chrX 163344989 163345023 -3305273 + AT_rich Low_complexity Low_complexity 1 34 0 6 1831 496 263 249 11 chrX 163345555 163345732 -3304564 + ID_B1 SINE B4 3 221 -3 6 1831 1655 223 167 34 chrX 163345829 163346083 -3304213 - RMER1C Other Other -2 1340 1049 6 1831 1145 54 13 20 chrX 163346083 163346233 -3304063 + B1_Mur4 SINE Alu 1 149 -1 6 1831 1655 229 170 34 chrX 163346233 163346589 -3303707 - RMER1C Other Other -294 1048 560 6 1831 27 0 0 0 chrX 163347061 163347088 -3303208 + AT_rich Low_complexity Low_complexity 1 27 0 6 1831 621 231 61 7 chrX 163347345 163347493 -3302803 - RMER12 LTR ERVK -4 1318 1163 6 1831 648 115 19 40 chrX 163347522 163347647 -3302649 - B1_Mus1 SINE Alu -21 128 2 6 1831 620 110 0 0 chrX 163347664 163347746 -3302550 - tRNA-Ser-TCY tRNA tRNA -3 82 1 6 1831 23 33 0 0 chrX 163347749 163347779 -3302517 + AT_rich Low_complexity Low_complexity 1 30 0 6 1831 5322 144 70 66 chrX 163347826 163348904 -3301392 - RMER12 LTR ERVK -240 1082 1 6 1831 365 306 0 27 chrX 163348907 163349018 -3301278 + B1F2 SINE Alu 8 115 -34 6 1831 279 291 77 10 chrX 163349049 163349153 -3301143 + Charlie4a DNA MER1_type 18 128 -380 6 1831 305 338 0 0 chrX 163349313 163349406 -3300890 - ID4 SINE ID -55 97 5 6 1831 5268 131 34 13 chrX 163349466 163350341 -3299955 - RMER17A2 LTR ERVK -12 894 1 6 1831 367 301 42 6 chrX 163350341 163350504 -3299792 + Charlie4a DNA MER1_type 177 345 -163 6 1831 391 310 92 19 chrX 163351234 163351441 -3298855 + RMER15 LTR ERVL 336 557 -18 6 1831 2749 232 202 8 chrX 163351508 163352338 -3297958 - RMER1A Other Other -7 1023 33 6 1831 410 297 36 0 chrX 163352339 163352450 -3297846 - RMER1A Other Other -774 256 142 6 1831 329 314 42 42 chrX 163352432 163352598 -3297698 - RMER1A Other Other -679 351 186 6 1831 1348 281 50 12 chrX 163352604 163353195 -3297101 - RMER1A Other Other -575 455 1 6 1831 434 244 30 15 chrX 163353495 163353628 -3296668 - L1ME3A LINE L1 -186 5987 5853 6 1831 191 263 148 66 chrX 163354112 163354234 -3296062 + MIRm SINE MIR 16 147 -129 6 1831 687 278 11 0 chrX 163355066 163355246 -3295050 + B3A SINE B2 1 182 -16 6 1831 21 0 0 0 chrX 163355421 163355442 -3294854 + AT_rich Low_complexity Low_complexity 1 21 0 6 1831 687 306 68 64 chrX 163355475 163355709 -3294587 + B4A SINE B4 52 286 -6 6 1831 229 222 37 0 chrX 163355741 163355795 -3294501 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1831 316 339 76 8 chrX 163355955 163356074 -3294222 - RMER30 DNA MER1_type -1 201 75 6 1831 544 288 142 39 chrX 163356135 163356395 -3293901 - B4A SINE B4 -4 288 2 6 1831 335 309 36 0 chrX 163356395 163356478 -3293818 - RMER30 DNA MER1_type -115 87 2 6 1831 1170 75 0 0 chrX 163357172 163357319 -3292977 - B1_Mus1 SINE Alu -1 147 1 6 1831 567 277 7 0 chrX 163357329 163357470 -3292826 - ID_B1 SINE B4 -4 220 79 6 1831 262 193 1 177 chrX 163357693 163357811 -3292485 + MLT1A1 LTR MaLR 23 127 -247 6 1831 327 224 26 26 chrX 163358010 163358088 -3292208 + MLT1A1 LTR MaLR 302 379 -29 6 1831 335 322 26 83 chrX 163358774 163358930 -3291366 + MLT1F2 LTR MaLR 41 187 -373 6 1831 434 191 140 19 chrX 163358940 163359047 -3291249 + MLT1C LTR MaLR 6 125 -342 6 1831 1177 259 78 35 chrX 163359106 163359682 -3290614 + L1M3 LINE L1 3819 4419 -1721 6 1831 263 395 37 0 chrX 163359693 163359855 -3290441 + MLT1A1 LTR MaLR 398 565 -4 6 1831 278 265 73 0 chrX 163361601 163361669 -3288627 - MER81 DNA AcHobo -39 75 3 6 1831 226 254 26 66 chrX 163362011 163362087 -3288209 + B1F SINE Alu 76 148 -1 6 1831 1472 159 56 0 chrX 163362410 163362680 -3287616 - Lx4A LINE L1 -1 7057 6773 6 1831 7117 112 39 13 chrX 163362680 163364188 -3286108 + Lx4A LINE L1 5229 6775 -283 6 1831 255 242 20 10 chrX 163364313 163364413 -3285883 + (TATATG)n Simple_repeat Simple_repeat 4 104 0 6 1831 285 146 48 12 chrX 163364414 163364529 -3285767 + (TG)n Simple_repeat Simple_repeat 1 119 0 6 1831 866 299 86 18 chrX 163364593 163364975 -3285321 - RMER5 LTR ERV1 0 534 127 6 1831 738 71 0 0 chrX 163365005 163365104 -3285192 - B1_Mm SINE Alu 0 147 49 6 1831 4566 25 2 0 chrX 163365104 163365632 -3284664 + L1Md_F3 LINE L1 6056 6584 0 6 1831 462 229 0 0 chrX 163366034 163366117 -3284179 - ID_B1 SINE B4 0 224 142 6 1831 372 289 0 0 chrX 163366143 163366219 -3284077 - ID_B1 SINE B4 -67 157 82 6 1831 465 66 0 0 chrX 163366569 163366630 -3283666 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 6 1831 1116 153 42 56 chrX 163367031 163367246 -3283050 - URR1A DNA MER1_type -9 217 6 6 1831 207 61 60 20 chrX 163368575 163368625 -3281671 + (CAAAAA)n Simple_repeat Simple_repeat 2 53 0 6 1831 249 335 129 38 chrX 163369039 163369225 -3281071 - MLT1J2 LTR MaLR -7 441 239 6 1831 616 191 35 42 chrX 163370415 163370453 -3279843 - ID_B1 SINE B4 -6 218 182 6 1831 2350 184 16 133 chrX 163370453 163371031 -3279265 + RLTR18B LTR ERVK 3 512 0 6 1831 616 191 35 42 chrX 163371031 163371134 -3279162 - ID_B1 SINE B4 -43 181 78 6 1831 322 268 191 34 chrX 163371359 163371506 -3278790 + HAL1-3A_ME LINE L1 2284 2453 -405 6 1831 341 329 117 40 chrX 163371696 163372073 -3278223 - L2c LINE L2 -50 3337 2927 6 1831 891 232 40 15 chrX 163372098 163372299 -3277997 - B3 SINE B2 -9 207 2 6 1831 3672 224 64 28 chrX 163372305 163373097 -3277199 + RCHARR1 DNA MER1_type 3 813 -161 6 1831 333 0 0 0 chrX 163373097 163373134 -3277162 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 1831 3672 224 64 28 chrX 163373134 163373276 -3277020 + RCHARR1 DNA MER1_type 814 970 -4 6 1831 321 197 0 0 chrX 163373315 163373381 -3276915 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 1831 450 0 0 0 chrX 163373938 163373988 -3276308 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1831 498 290 41 47 chrX 163374155 163374325 -3275971 + MER5B DNA MER1_type 4 172 -6 6 1831 1661 59 4 40 chrX 163374923 163375170 -3275126 - L1_Mus2 LINE L1 -1 6565 6328 6 1831 210 216 0 0 chrX 163375872 163375909 -3274387 + polypyrimidine Low_complexity Low_complexity 4 40 0 6 1831 342 0 0 0 chrX 163375914 163375952 -3274344 + (TC)n Simple_repeat Simple_repeat 2 39 0 6 1831 207 0 0 0 chrX 163375952 163375974 -3274322 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1831 194 250 105 88 chrX 163376014 163376128 -3274168 - L2c LINE L2 -1002 2417 2302 6 1831 492 18 0 0 chrX 163376315 163376372 -3273924 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1831 489 34 0 0 chrX 163377403 163377462 -3272834 + (TC)n Simple_repeat Simple_repeat 2 60 0 6 1831 344 256 10 62 chrX 163377525 163377621 -3272675 - RSINE1 SINE B4 -60 105 15 6 1831 897 168 0 20 chrX 163378016 163378168 -3272128 - B1_Mur4 SINE Alu 0 150 2 7 1831 365 317 157 52 chrX 163378544 163378754 -3271542 - MLT1F2 LTR MaLR 0 560 329 7 1831 237 324 89 101 chrX 163379621 163379681 -3270615 + MER20 DNA MER1_type 6 69 -150 7 1831 414 0 0 0 chrX 163379681 163379727 -3270569 + (TC)n Simple_repeat Simple_repeat 2 47 0 7 1831 579 304 62 59 chrX 163379733 163380023 -3270273 - B4A SINE B4 0 292 2 7 1831 237 324 89 101 chrX 163380023 163380113 -3270183 + MER20 DNA MER1_type 70 161 -58 7 1831 786 315 5 0 chrX 163380705 163380905 -3269391 + ID_B1 SINE B4 4 204 -20 7 1831 517 269 14 91 chrX 163381078 163381221 -3269075 - ID_B1 SINE B4 -8 216 85 7 1831 513 324 6 92 chrX 163381245 163381408 -3268888 - ID_B1 SINE B4 -2 222 74 7 1831 2850 194 36 33 chrX 163381428 163381595 -3268701 - Lx9 LINE L1 0 7644 7474 7 1831 1355 128 17 34 chrX 163381595 163381830 -3268466 - L1_Mus3 LINE L1 0 6638 6408 7 1831 2850 194 36 33 chrX 163381830 163382387 -3267909 - Lx9 LINE L1 -171 7473 6918 7 1831 1921 203 11 6 chrX 163382390 163382747 -3267549 - ORR1B2 LTR MaLR -8 359 1 7 1831 1665 240 39 0 chrX 163382747 163383134 -3267162 - Lx9 LINE L1 -721 6923 6522 7 1831 587 231 15 51 chrX 163383235 163383431 -3266865 + L1MD3 LINE L1 7728 7916 -79 7 1831 244 237 0 0 chrX 163384174 163384233 -3266063 + T-rich Low_complexity Low_complexity 1 59 0 7 1831 203 184 0 0 chrX 163384535 163384573 -3265723 + (TAA)n Simple_repeat Simple_repeat 2 39 0 7 1831 234 266 0 71 chrX 163385023 163385108 -3265188 + LTR48 LTR ERV1 7 85 -702 7 1831 191 36 36 0 chrX 163385108 163385136 -3265160 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 7 1831 1331 95 47 14 chrX 163385340 163385591 -3264705 + L1_Mus3 LINE L1 6417 6638 0 7 1831 1234 73 0 6 chrX 163385593 163385758 -3264538 + B2_Mm2 SINE B2 27 190 -5 7 1831 301 314 31 67 chrX 163386046 163386271 -3264025 - MER20 DNA MER1_type -2 217 1 7 1831 288 0 0 0 chrX 163386271 163386303 -3263993 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 7 1831 545 217 0 17 chrX 163386323 163386440 -3263856 + PB1D9 SINE Alu 5 119 -1 7 1831 233 169 17 0 chrX 163386441 163386500 -3263796 + A-rich Low_complexity Low_complexity 1 60 0 7 1831 219 146 0 0 chrX 163386524 163386565 -3263731 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1831 216 308 0 0 chrX 163387003 163387068 -3263228 + (TG)n Simple_repeat Simple_repeat 2 66 0 7 1831 312 304 103 51 chrX 163387078 163387234 -3263062 - ID_B1 SINE B4 -59 165 2 7 1831 829 270 0 10 chrX 163387324 163387522 -3262774 - MTE2a LTR MaLR -18 361 166 7 1831 838 229 0 90 chrX 163387539 163387750 -3262546 - B3A SINE B2 -4 194 3 7 1831 622 276 12 58 chrX 163387803 163387976 -3262320 - MTE2a LTR MaLR -214 165 1 7 1831 412 306 1 44 chrX 163388275 163388428 -3261868 - MLT1A1 LTR MaLR -7 401 212 7 1831 774 0 0 0 chrX 163388693 163388779 -3261517 + (TTC)n Simple_repeat Simple_repeat 2 87 0 7 1831 491 298 24 0 chrX 163388784 163388908 -3261388 - ID_B1 SINE B4 -10 214 88 7 1831 278 247 74 80 chrX 163389442 163389618 -3260678 - L1ME2z LINE L1 -283 6161 5987 7 1831 284 312 31 8 chrX 163391298 163391427 -3258869 - MER5A1 DNA MER1_type -34 132 1 7 1831 827 192 91 27 chrX 163391558 163391745 -3258551 - MTD LTR MaLR -14 405 207 7 1831 1301 68 0 6 chrX 163391745 163391923 -3258373 + (TTTC)n Simple_repeat Simple_repeat 1 177 0 7 1831 48 18 0 0 chrX 163391943 163391998 -3258298 + AT_rich Low_complexity Low_complexity 1 55 0 7 1831 348 228 25 0 chrX 163392217 163392296 -3258000 - Lx7 LINE L1 -408 7288 7208 7 1831 198 0 0 0 chrX 163392355 163392377 -3257919 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 7 1831 204 88 0 56 chrX 163392389 163392425 -3257871 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 7 1831 2835 163 16 6 chrX 163392426 163392607 -3257689 + Lx4B LINE L1 5370 5550 -336 7 1831 2888 52 0 0 chrX 163392607 163392953 -3257343 - ORR1A1 LTR MaLR 0 346 1 7 1831 6897 157 76 14 chrX 163392953 163394370 -3255926 + Lx4B LINE L1 5551 7058 0 7 1831 322 277 35 9 chrX 163394363 163394476 -3255820 - Lx6 LINE L1 -183 7277 7162 7 1831 839 188 157 16 chrX 163394476 163394734 -3255562 - MTD LTR MaLR -119 302 12 7 1831 548 311 43 32 chrX 163394796 163394982 -3255314 + MER5A DNA MER1_type 1 188 -1 7 1831 764 204 14 0 chrX 163395010 163395157 -3255139 - MER5A1 DNA MER1_type -17 149 1 7 1831 802 179 129 121 chrX 163396352 163396631 -3253665 - ORR1B1 LTR MaLR -8 318 1 7 1831 525 44 0 0 chrX 163397302 163397370 -3252926 + (TG)n Simple_repeat Simple_repeat 2 69 0 7 1831 1321 264 13 64 chrX 163397600 163397919 -3252377 + MTEa LTR MaLR 18 325 -54 7 1831 5169 56 76 0 chrX 163397919 163398580 -3251716 + L1_Mus1 LINE L1 5857 6567 0 7 1831 1321 264 13 64 chrX 163398580 163398633 -3251663 + MTEa LTR MaLR 326 371 -8 7 1831 487 314 20 40 chrX 163398832 163399034 -3251262 + RMER15 LTR ERVL 362 559 -16 7 1831 320 267 34 8 chrX 163399141 163399258 -3251038 - L1MC LINE L1 -524 5809 5690 7 1831 188 67 0 32 chrX 163399313 163399344 -3250952 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 7 1831 630 284 26 26 chrX 163400510 163400662 -3249634 - RSINE1 SINE B4 0 165 14 7 1831 234 0 0 0 chrX 163400673 163400699 -3249597 + (TA)n Simple_repeat Simple_repeat 2 27 0 7 1831 810 258 6 0 chrX 163400834 163400993 -3249303 + ID_B1 SINE B4 49 208 -16 7 1831 992 109 77 0 chrX 163400994 163401150 -3249146 + RMER19B LTR ERVK 1 168 -734 7 1831 245 29 29 0 chrX 163401277 163401311 -3248985 + (TAA)n Simple_repeat Simple_repeat 3 37 0 7 1831 21 36 0 0 chrX 163401911 163401939 -3248357 + AT_rich Low_complexity Low_complexity 1 28 0 7 1831 244 261 23 122 chrX 163402136 163402267 -3248029 + PB1D9 SINE Alu 3 120 0 7 1831 821 198 166 0 chrX 163404275 163404462 -3245834 - URR1B DNA MER1_type -7 218 1 7 1831 1516 255 21 19 chrX 163404559 163404931 -3245365 - MTEa LTR MaLR -3 376 4 7 1831 1063 310 158 28 chrX 163404931 163405423 -3244873 - MLT1F1 LTR MaLR -13 556 1 7 1831 437 227 40 20 chrX 163405855 163405954 -3244342 - B1F1 SINE Alu -26 123 23 7 1831 483 212 76 0 chrX 163406231 163406349 -3243947 - Lx8 LINE L1 -936 6537 6411 7 1831 29 60 0 0 chrX 163406428 163406478 -3243818 + AT_rich Low_complexity Low_complexity 1 50 0 7 1831 397 238 8 24 chrX 163406509 163406634 -3243662 + Lx2B LINE L1 6873 6995 -5 7 1831 271 157 3 40 chrX 163407615 163407680 -3242616 + PB1D10 SINE Alu 65 127 0 7 1831 393 289 0 37 chrX 163409091 163409199 -3241097 + ID_B1 SINE B4 121 224 0 7 1831 506 336 67 18 chrX 163409261 163409485 -3240811 + MLT1C LTR MaLR 233 467 0 7 1831 211 340 0 49 chrX 163409625 163409727 -3240569 - MIRm SINE MIR -79 197 101 7 1831 311 174 42 42 chrX 163410579 163410651 -3239645 + 4.5SRNA scRNA scRNA 16 87 -7 7 1831 222 234 0 123 chrX 163410589 163410662 -3239634 + PB1D10 SINE Alu 33 96 -21 7 1831 751 201 6 6 chrX 163410664 163410839 -3239457 + GA-rich Low_complexity Low_complexity 2 176 0 7 1831 1111 49 0 77 chrX 163410876 163411031 -3239265 + B1_Mus2 SINE Alu 2 144 -3 7 1831 387 0 0 0 chrX 163411031 163411074 -3239222 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 7 1831 1269 85 0 0 chrX 163411553 163411729 -3238567 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 7 1831 270 95 0 0 chrX 163411731 163411773 -3238523 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 7 1831 207 0 0 0 chrX 163411774 163411797 -3238499 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1831 708 161 9 0 chrX 163411797 163411909 -3238387 - B1_Mus1 SINE Alu -9 139 27 7 1831 321 217 118 24 chrX 163411833 163411918 -3238378 - MT2B LTR ERVL -344 257 165 7 1831 439 229 26 103 chrX 163412232 163412349 -3237947 + RSINE1 SINE B4 58 165 0 7 1831 297 326 33 0 chrX 163412371 163412463 -3237833 + PB1D7 SINE Alu 1 95 -25 7 1831 405 321 58 29 chrX 163412862 163412877 -3237419 - B4 SINE B4 -68 224 86 7 1831 555 237 25 17 chrX 163412877 163412997 -3237299 - B1F SINE Alu -28 121 1 7 1831 295 307 59 10 chrX 163413335 163413350 -3236946 + B1F SINE Alu 35 141 -8 7 1831 444 241 0 0 chrX 163413350 163413437 -3236859 + ID_B1 SINE B4 130 216 -8 7 1831 394 203 234 29 chrX 163413542 163413679 -3236617 + Arthur1B DNA Tip100 21 185 -1040 7 1831 3056 32 0 0 chrX 163413934 163414306 -3235990 + L1Md_F3 LINE L1 6063 6434 -150 7 1831 724 270 114 48 chrX 163414876 163415148 -3235148 - B4A SINE B4 0 292 3 7 1831 4025 77 6 7 chrX 163415639 163416177 -3234119 - L1_Mus1 LINE L1 0 6567 6031 7 1831 419 342 7 0 chrX 163416354 163416506 -3233790 - MLT1D LTR MaLR -2 503 351 7 1831 281 309 25 98 chrX 163416805 163416901 -3233395 - PB1D10 SINE Alu 0 117 26 7 1831 2245 147 18 10 chrX 163416901 163417292 -3233004 - ORR1B1 LTR MaLR 0 394 1 7 1831 281 309 25 98 chrX 163417292 163417317 -3232979 - PB1D10 SINE Alu -92 25 5 7 1831 431 271 28 0 chrX 163417845 163417952 -3232344 + PB1D10 SINE Alu 1 110 -7 7 1831 1042 230 48 9 chrX 163417982 163418307 -3231989 + L1_Mur3 LINE L1 1 356 -7356 7 1831 368 322 0 9 chrX 163418356 163418472 -3231824 - B1F1 SINE Alu -22 127 13 7 1831 749 271 28 9 chrX 163419594 163419810 -3230486 + ID_B1 SINE B4 2 221 -3 7 1831 751 233 24 68 chrX 163420664 163420835 -3229461 + B3A SINE B2 1 168 -30 7 1831 402 21 0 0 chrX 163420835 163420882 -3229414 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 1831 751 233 24 68 chrX 163420882 163420917 -3229379 + B3A SINE B2 169 198 0 7 1831 876 317 11 14 chrX 163421310 163421592 -3228704 + B4A SINE B4 2 282 -10 7 1831 2196 215 31 32 chrX 163422178 163422701 -3227595 + RLTR11A2 LTR ERVK 6 527 0 7 1831 371 273 28 7 chrX 163422904 163423048 -3227248 + Lx9 LINE L1 7326 7472 -172 8 1831 192 77 0 0 chrX 163423057 163423083 -3227213 + (TAGA)n Simple_repeat Simple_repeat 1 26 0 8 1831 215 244 0 0 chrX 163423235 163423280 -3227016 + MER5A DNA MER1_type 29 73 -116 8 1831 326 281 0 10 chrX 163423331 163423466 -3226830 + L1MA5 LINE L1 6159 6291 -9 8 1831 569 254 0 0 chrX 163423496 163423606 -3226690 + ID_B1 SINE B4 87 196 -28 8 1831 258 327 19 9 chrX 163423513 163423621 -3226675 - YREP_Mm Unknown Unknown -1518 294 186 8 1831 295 321 0 47 chrX 163423630 163423715 -3226581 - ID_B1 SINE B4 -63 161 81 8 1831 222 367 0 32 chrX 163423840 163423933 -3226363 + ID_B1 SINE B4 82 171 -53 8 1831 285 308 118 15 chrX 163423979 163424114 -3226182 + MER5B DNA MER1_type 15 163 -15 8 1831 31284 74 1 6 chrX 163424336 163429613 -3220683 + L1Md_F2 LINE L1 331 5585 -298 8 1831 8324 35 2 3 chrX 163429614 163430611 -3219685 + L1Md_F2 LINE L1 5587 6582 0 8 1831 567 0 0 0 chrX 163432526 163432589 -3217707 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 8 1831 1420 255 7 4 chrX 163432691 163432966 -3217330 - B4 SINE B4 -3 289 14 8 1831 802 182 183 52 chrX 163432986 163433177 -3217119 - B3 SINE B2 0 216 1 8 1831 283 180 157 20 chrX 163433190 163433292 -3217004 - Charlie5 DNA MER1_type -87 2537 2422 8 1831 465 345 14 7 chrX 163433341 163433481 -3216815 - RSINE1 SINE B4 -22 143 3 8 1831 200 173 19 19 chrX 163433505 163433558 -3216738 + T-rich Low_complexity Low_complexity 3 55 0 8 1831 546 206 6 29 chrX 163434057 163434232 -3216064 + GA-rich Low_complexity Low_complexity 2 172 0 8 1831 308 127 18 0 chrX 163434798 163434853 -3215443 + (TAAA)n Simple_repeat Simple_repeat 4 59 0 8 1831 551 170 21 0 chrX 163435218 163435312 -3214984 + PB1D7 SINE Alu 25 120 0 8 1831 1082 250 86 78 chrX 163435641 163436001 -3214295 - ORR1D2 LTR MaLR 0 370 8 8 1831 379 240 0 26 chrX 163436388 163436465 -3213831 + ID SINE ID 2 76 -148 8 1831 24 0 0 0 chrX 163436856 163436880 -3213416 + AT_rich Low_complexity Low_complexity 1 24 0 8 1831 497 349 0 14 chrX 163436944 163437092 -3213204 - ID_B1 SINE B4 0 224 79 8 1831 824 118 7 0 chrX 163437394 163437530 -3212766 + (TCTA)n Simple_repeat Simple_repeat 4 140 0 8 1831 695 268 59 70 chrX 163437597 163437870 -3212426 - B4A SINE B4 -18 274 5 8 1831 405 58 0 0 chrX 163438132 163438184 -3212112 + (TC)n Simple_repeat Simple_repeat 1 52 0 8 1831 421 311 23 62 chrX 163438184 163438314 -3211982 - RSINE1 SINE B4 0 165 41 8 1831 296 48 0 23 chrX 163438334 163438377 -3211919 + (CTTA)n Simple_repeat Simple_repeat 1 42 0 8 1831 381 258 10 58 chrX 163438816 163438919 -3211377 - B1F1 SINE Alu -51 98 1 8 1831 948 244 15 5 chrX 163439328 163439530 -3210766 + ID_B1 SINE B4 2 205 -19 8 1831 708 285 107 31 chrX 163439553 163439814 -3210482 + B4 SINE B4 1 281 -11 8 1831 243 0 0 0 chrX 163439820 163439847 -3210449 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 1831 902 109 0 5 chrX 163439847 163440050 -3210246 + (GA)n Simple_repeat Simple_repeat 1 202 0 8 1831 655 300 149 25 chrX 163440170 163440288 -3210008 - MER89 LTR ERV1 -6 553 416 8 1831 903 124 0 0 chrX 163440288 163440433 -3209863 + (GAGAA)n Simple_repeat Simple_repeat 4 148 0 8 1831 655 300 149 25 chrX 163440433 163440635 -3209661 - MER89 LTR ERV1 -144 415 193 8 1831 293 178 192 0 chrX 163440602 163440675 -3209621 - MER89 LTR ERV1 -470 89 3 8 1831 7409 55 5 12 chrX 163440675 163441796 -3208500 - L1Md_F2 LINE L1 -6 6576 5464 8 1831 381 188 16 0 chrX 163441912 163441976 -3208320 + PB1D10 SINE Alu 2 66 -51 8 1831 195 373 0 15 chrX 163441999 163442067 -3208229 + MER5A1 DNA MER1_type 14 80 -86 8 1831 1326 114 33 9 chrX 163442116 163442328 -3207968 - URR1A DNA MER1_type 0 226 10 8 1831 490 292 48 14 chrX 163442553 163442699 -3207597 + ID_B1 SINE B4 70 220 -4 8 1831 465 285 147 85 chrX 163443016 163443369 -3206927 - MTE2a LTR MaLR 0 379 5 8 1831 449 34 17 0 chrX 163443428 163443487 -3206809 + (CA)n Simple_repeat Simple_repeat 2 61 0 8 1831 408 299 133 38 chrX 163443548 163443864 -3206432 + L1M4b LINE L1 2842 3187 -4147 8 1831 582 219 0 23 chrX 163444451 163444582 -3205714 + ID_B1 SINE B4 91 218 -6 8 1831 211 365 39 59 chrX 163444748 163444759 -3205537 + ID SINE ID 73 81 -143 8 1831 322 306 52 42 chrX 163444759 163444876 -3205420 + B1F SINE Alu 3 120 0 8 1831 1195 76 12 0 chrX 163444879 163445051 -3205245 + (GAAA)n Simple_repeat Simple_repeat 3 176 0 8 1831 960 9 0 0 chrX 163445062 163445171 -3205125 + (GGGAGA)n Simple_repeat Simple_repeat 6 114 0 8 1831 415 173 0 52 chrX 163445311 163445445 -3204851 + GA-rich Low_complexity Low_complexity 3 129 0 8 1831 377 339 21 32 chrX 163445579 163445765 -3204531 - MIRb SINE MIR -44 224 41 8 1831 684 0 0 0 chrX 163446363 163446439 -3203857 + (TTCC)n Simple_repeat Simple_repeat 4 79 0 8 1831 582 15 0 0 chrX 163446439 163446506 -3203790 + (TC)n Simple_repeat Simple_repeat 1 67 0 8 1831 568 286 34 13 chrX 163446520 163446669 -3203627 - RSINE1 SINE B4 -1 164 13 8 1831 204 284 0 0 chrX 163446686 163446760 -3203536 + A-rich Low_complexity Low_complexity 1 74 0 8 1832 1351 137 108 0 chrX 163446975 163447179 -3203117 - URR1A DNA MER1_type 0 226 1 8 1832 449 342 77 0 chrX 163447588 163447743 -3202553 - MER58A DNA MER1_type -49 175 9 8 1832 426 302 89 58 chrX 163448031 163448323 -3201973 - L1ME3A LINE L1 -308 5865 5565 8 1832 286 200 33 0 chrX 163448345 163448405 -3201891 + ID_B1 SINE B4 155 216 -8 8 1832 524 252 102 18 chrX 163448592 163448818 -3201478 - L1M4 LINE L1 -649 5529 5285 8 1832 314 309 12 0 chrX 163448904 163448988 -3201308 + PB1D7 SINE Alu 34 118 -2 8 1832 807 316 107 33 chrX 163448977 163449396 -3200900 - MLT1F LTR MaLR -26 522 73 8 1832 437 279 229 0 chrX 163449758 163449937 -3200359 - ID_B1 SINE B4 -2 222 3 8 1832 201 246 53 0 chrX 163450680 163450737 -3199559 + CT-rich Low_complexity Low_complexity 1 60 0 8 1832 499 263 9 0 chrX 163450771 163450885 -3199411 + ID_B1 SINE B4 109 223 -1 8 1832 182 111 0 62 chrX 163451258 163451306 -3198990 + T-rich Low_complexity Low_complexity 1 45 0 8 1832 380 320 61 104 chrX 163451544 163451588 -3198708 + B4 SINE B4 43 76 -216 8 1832 342 0 0 0 chrX 163451588 163451626 -3198670 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 1832 380 320 61 104 chrX 163451626 163451745 -3198551 + B4 SINE B4 77 199 -93 8 1832 778 89 79 24 chrX 163451750 163451963 -3198333 + L1Md_F2 LINE L1 6449 6582 0 8 1832 202 140 75 149 chrX 163452793 163452860 -3197436 + MIR3 SINE MIR 111 172 -36 8 1832 2106 174 13 18 chrX 163453049 163453429 -3196867 + ORR1B1 LTR MaLR 17 394 0 8 1832 1101 37 0 0 chrX 163453472 163453606 -3196690 + (CA)n Simple_repeat Simple_repeat 1 134 0 8 1832 275 277 0 30 chrX 163453634 163453701 -3196595 - ORR1E LTR MaLR -57 322 258 8 1832 434 195 23 11 chrX 163453695 163453783 -3196513 - ORR1E LTR MaLR -270 89 1 8 1832 571 340 24 24 chrX 163453797 163454008 -3196288 - MER20 DNA MER1_type -5 214 4 8 1832 213 275 272 57 chrX 163454047 163454076 -3196220 - B2_Mm1t SINE B2 0 193 164 8 1832 486 103 0 0 chrX 163454076 163454154 -3196142 + (TG)n Simple_repeat Simple_repeat 1 78 0 8 1832 351 275 272 57 chrX 163454154 163454282 -3196014 - B3A SINE B2 -30 163 2 8 1832 335 291 28 63 chrX 163454284 163454327 -3195969 + YREP_Mm Unknown Unknown 157 198 -1614 8 1832 999 276 33 26 chrX 163454327 163454599 -3195697 - B4 SINE B4 -16 276 3 8 1832 335 291 28 63 chrX 163454599 163454698 -3195598 + YREP_Mm Unknown Unknown 199 294 -1518 8 1832 842 273 25 5 chrX 163454600 163454799 -3195497 - ID_B1 SINE B4 -21 203 1 8 1832 327 318 73 13 chrX 163454819 163454969 -3195327 + MER5A1 DNA MER1_type 6 164 -2 8 1832 405 381 22 22 chrX 163455948 163456133 -3194163 - B4A SINE B4 -25 267 83 8 1832 990 207 24 10 chrX 163456227 163456432 -3193864 + URR1A DNA MER1_type 19 226 0 8 1832 219 189 0 51 chrX 163456497 163456575 -3193721 + T-rich Low_complexity Low_complexity 1 74 0 8 1832 364 259 25 0 chrX 163456730 163456811 -3193485 + ID_B1 SINE B4 106 188 -36 8 1832 237 65 0 0 chrX 163456822 163456853 -3193443 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 1832 293 290 36 36 chrX 163456973 163457084 -3193212 - MER58A DNA MER1_type -62 162 52 8 1832 676 211 6 6 chrX 163457243 163457298 -3192998 + polypurine Low_complexity Low_complexity 3 58 0 8 1832 1212 106 0 0 chrX 163457298 163457477 -3192819 + (GA)n Simple_repeat Simple_repeat 2 180 0 8 1832 676 211 6 6 chrX 163457477 163457597 -3192699 + polypurine Low_complexity Low_complexity 59 177 0 8 1832 885 246 23 19 chrX 163458431 163458646 -3191650 + B3 SINE B2 1 216 0 8 1832 21 36 0 0 chrX 163458749 163458777 -3191519 + AT_rich Low_complexity Low_complexity 1 28 0 8 1832 980 255 0 9 chrX 163458783 163458993 -3191303 - B3 SINE B2 -7 209 2 8 1832 617 279 50 31 chrX 163459021 163459180 -3191116 - RSINE1 SINE B4 0 165 4 8 1832 4328 61 6 8 chrX 163459197 163459724 -3190572 + Lx3_Mus LINE L1 6484 7009 0 8 1832 32 0 0 0 chrX 163459724 163459756 -3190540 + AT_rich Low_complexity Low_complexity 1 32 0 8 1832 843 294 47 0 chrX 163459794 163460005 -3190291 - ID_B1 SINE B4 -3 221 1 8 1832 504 308 8 17 chrX 163460053 163460172 -3190124 - B1F SINE Alu -29 120 3 8 1832 1943 168 82 6 chrX 163462005 163462346 -3187950 - ORR1B2 LTR MaLR 0 367 1 8 1832 438 269 138 28 chrX 163462349 163462366 -3187930 - RSINE1 SINE B4 0 165 149 8 1832 432 0 0 0 chrX 163462366 163462414 -3187882 + (GA)n Simple_repeat Simple_repeat 1 48 0 8 1832 438 269 138 28 chrX 163462414 163462541 -3187755 - RSINE1 SINE B4 -17 148 6 8 1832 506 280 8 0 chrX 163462545 163462663 -3187633 - MLT2B2 LTR ERVL -73 489 371 8 1832 1411 263 43 3 chrX 163462672 163463019 -3187277 + MTEa LTR MaLR 15 375 -4 8 1832 842 313 75 55 chrX 163463051 163463413 -3186883 - MLT2B2 LTR ERVL -138 377 9 8 1832 224 364 21 80 chrX 163463490 163463678 -3186618 - L4 LINE RTE -1480 549 373 9 1832 552 240 30 67 chrX 163463738 163463903 -3186393 + RSINE1 SINE B4 3 161 -4 9 1832 474 49 0 0 chrX 163464941 163465002 -3185294 + (TG)n Simple_repeat Simple_repeat 2 62 0 9 1832 21 36 0 0 chrX 163465135 163465163 -3185133 + AT_rich Low_complexity Low_complexity 1 28 0 9 1832 636 70 0 0 chrX 163466216 163466302 -3183994 + (TCCA)n Simple_repeat Simple_repeat 4 89 0 9 1832 857 222 88 0 chrX 163467661 163467877 -3182419 + Lx9 LINE L1 7222 7456 -188 9 1832 467 29 0 0 chrX 163468050 163468118 -3182178 - RMER4B LTR ERVK 0 585 518 9 1832 952 248 41 41 chrX 163468107 163468213 -3182083 - ID_B1 SINE B4 -4 220 115 9 1832 2960 82 18 3 chrX 163468213 163468594 -3181702 - L1_Mus2 LINE L1 -1 6565 6179 9 1832 952 248 41 41 chrX 163468594 163468706 -3181590 - ID_B1 SINE B4 -110 114 2 9 1832 695 262 96 15 chrX 163469224 163469422 -3180874 + ID_B1 SINE B4 2 215 -9 9 1832 880 218 116 9 chrX 163469461 163469751 -3180545 + ORR1D1 LTR MaLR 18 366 -4 9 1832 939 219 71 5 chrX 163469751 163469948 -3180348 + B3 SINE B2 1 210 -6 9 1832 634 364 21 4 chrX 163469994 163470234 -3180062 - MLT1G LTR MaLR -340 251 8 9 1832 495 0 0 0 chrX 163470620 163470675 -3179621 + (TG)n Simple_repeat Simple_repeat 2 56 0 9 1832 230 349 39 31 chrX 163471447 163471577 -3178719 - RSINE1 SINE B4 -4 161 31 9 1832 1165 268 90 9 chrX 163471580 163471915 -3178381 - MTE2b LTR MaLR -17 362 1 9 1832 278 282 170 71 chrX 163472232 163472249 -3178047 + RSINE1 SINE B4 11 28 -137 9 1832 459 0 0 0 chrX 163472249 163472300 -3177996 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 1832 278 282 170 71 chrX 163472300 163472423 -3177873 + RSINE1 SINE B4 29 165 0 9 1832 231 355 127 35 chrX 163472737 163472965 -3177331 + MIR SINE MIR 6 254 -8 9 1832 306 262 80 53 chrX 163473675 163473788 -3176508 - PB1D10 SINE Alu -1 116 1 9 1832 378 0 0 0 chrX 163474496 163474538 -3175758 + (TG)n Simple_repeat Simple_repeat 2 43 0 9 1832 222 136 0 0 chrX 163474743 163474787 -3175509 + (GGAA)n Simple_repeat Simple_repeat 3 46 0 9 1832 225 250 62 15 chrX 163474789 163474854 -3175442 + ID4_ SINE ID 3 70 -13 9 1832 375 98 0 0 chrX 163474854 163474915 -3175381 + (TC)n Simple_repeat Simple_repeat 2 62 0 9 1832 270 0 0 0 chrX 163474915 163474945 -3175351 + (CA)n Simple_repeat Simple_repeat 1 30 0 9 1832 561 302 31 0 chrX 163475356 163475518 -3174778 + ID_B1 SINE B4 2 168 -56 9 1832 337 321 50 59 chrX 163475521 163475743 -3174553 - RMER15 LTR ERVL -7 568 349 9 1832 1125 133 197 0 chrX 163475809 163475997 -3174299 + URR1A DNA MER1_type 2 226 0 9 1832 250 254 63 0 chrX 163476163 163476226 -3174070 + ID_B1 SINE B4 154 220 -4 9 1832 456 104 0 0 chrX 163476227 163476294 -3174002 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 9 1832 488 292 0 20 chrX 163476761 163476905 -3173391 + B1F2 SINE Alu 7 138 -11 9 1832 609 285 171 0 chrX 163476917 163477144 -3173152 + B4A SINE B4 1 266 -26 9 1832 324 0 0 0 chrX 163477145 163477181 -3173115 + (TC)n Simple_repeat Simple_repeat 1 36 0 9 1832 342 0 0 0 chrX 163477181 163477218 -3173078 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 1832 617 278 121 0 chrX 163477259 163477482 -3172814 - MER58B DNA MER1_type -5 336 87 9 1832 243 0 0 0 chrX 163477485 163477512 -3172784 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 9 1832 274 246 0 76 chrX 163477559 163477638 -3172658 - B1F SINE Alu -35 114 42 9 1832 252 316 40 0 chrX 163477739 163477815 -3172481 - MT2B2 LTR ERVL -312 272 194 9 1832 420 330 40 0 chrX 163477749 163477849 -3172447 - PB1D10 SINE Alu -11 106 3 9 1832 528 277 7 72 chrX 163477849 163477920 -3172376 - ID SINE ID -141 83 23 9 1832 328 279 154 0 chrX 163477942 163478046 -3172250 - PB1 SINE Alu -7 120 1 9 1832 411 73 0 0 chrX 163478310 163478365 -3171931 + (TG)n Simple_repeat Simple_repeat 2 56 0 9 1832 717 269 113 10 chrX 163478391 163478594 -3171702 - B4A SINE B4 -67 225 2 9 1832 610 254 129 64 chrX 163478918 163479092 -3171204 + L1MB8 LINE L1 5461 5651 -533 9 1832 1257 206 9 0 chrX 163479092 163479306 -3170990 - B3 SINE B2 0 216 1 9 1832 610 254 129 64 chrX 163479306 163479442 -3170854 + L1MB8 LINE L1 5652 5791 -393 9 1832 1284 114 23 0 chrX 163479468 163479644 -3170652 + B2_Mm2 SINE B2 2 181 -14 9 1832 441 71 9 0 chrX 163479672 163479736 -3170560 + B2_Mm2 SINE B2 47 114 -102 9 1832 204 40 0 0 chrX 163479751 163479776 -3170520 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 9 1832 783 296 60 51 chrX 163479780 163480111 -3170185 + L1MB8 LINE L1 5818 6151 -27 9 1832 433 235 170 26 chrX 163480664 163480817 -3169479 - ORR1E LTR MaLR 0 379 205 9 1832 534 282 23 0 chrX 163480829 163480960 -3169336 - ORR1E LTR MaLR -222 137 4 9 1832 626 322 39 0 chrX 163481101 163481306 -3168990 + Lx8 LINE L1 6974 7186 -287 9 1832 2291 120 0 71 chrX 163481355 163481706 -3168590 + ORR1A3 LTR MaLR 1 326 0 9 1832 459 0 0 0 chrX 163481895 163481946 -3168350 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 1832 271 213 180 0 chrX 163482650 163482711 -3167585 - ID SINE ID -136 88 17 9 1832 1027 252 29 0 chrX 163482801 163483047 -3167249 + Lx8 LINE L1 6861 7113 -360 9 1832 229 293 137 8 chrX 163483132 163483256 -3167040 + Lx8 LINE L1 7332 7471 -2 9 1832 260 255 247 73 chrX 163483459 163483637 -3166659 - MLT1D LTR MaLR -289 216 8 9 1832 207 349 0 12 chrX 163483766 163483850 -3166446 - MIRb SINE MIR -100 168 86 9 1832 406 285 77 0 chrX 163483887 163483915 -3166381 - ID_B1 SINE B4 0 224 193 9 1832 267 31 0 0 chrX 163483915 163483947 -3166349 + (TGG)n Simple_repeat Simple_repeat 1 32 0 9 1832 406 285 77 0 chrX 163483947 163484048 -3166248 - ID_B1 SINE B4 -32 192 86 9 1832 324 0 0 0 chrX 163484368 163484404 -3165892 + (TG)n Simple_repeat Simple_repeat 2 37 0 9 1832 365 175 0 0 chrX 163484591 163484654 -3165642 - ID_B1 SINE B4 -2 222 160 9 1832 655 252 24 30 chrX 163484643 163484835 -3165461 + ID_B1 SINE B4 11 206 -86 9 1832 1183 298 51 46 chrX 163485571 163485983 -3164313 + MTD LTR MaLR 6 419 0 9 1832 701 250 0 65 chrX 163486093 163486247 -3164049 + B1F2 SINE Alu 2 145 -4 9 1832 1856 115 21 14 chrX 163486277 163486560 -3163736 + Lx3A LINE L1 6692 6976 -5 9 1832 966 116 0 0 chrX 163486560 163486707 -3163589 + (GGAGAA)n Simple_repeat Simple_repeat 3 149 0 9 1832 577 269 15 0 chrX 163486709 163486839 -3163457 + ID_B1 SINE B4 86 217 -7 9 1832 289 197 34 140 chrX 163486980 163487133 -3163163 + L1MB7 LINE L1 6046 6184 0 9 1832 198 103 0 0 chrX 163487200 163487229 -3163067 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 9 1832 710 303 14 9 chrX 163488067 163488280 -3162016 + ID_B1 SINE B4 11 224 0 9 1832 21 0 0 0 chrX 163488352 163488373 -3161923 + AT_rich Low_complexity Low_complexity 1 21 0 9 1832 429 216 0 0 chrX 163488633 163488707 -3161589 + B1F SINE Alu 69 142 -7 9 1832 230 169 11 245 chrX 163488641 163488735 -3161561 + B4 SINE B4 166 237 -55 9 1832 480 254 109 11 chrX 163488735 163488910 -3161386 + L1MB7 LINE L1 5650 5841 -343 9 1832 451 219 114 0 chrX 163488901 163489015 -3161281 + L1MA5 LINE L1 6173 6299 -1 9 1832 951 262 107 50 chrX 163489024 163489285 -3161011 + B4 SINE B4 7 282 -10 9 1832 396 253 0 71 chrX 163489300 163489385 -3160911 + ID_B1 SINE B4 86 164 -60 9 1832 304 337 0 71 chrX 163489385 163489399 -3160897 + B1_Mus2 SINE Alu 5 96 -51 9 1832 189 154 0 0 chrX 163489421 163489460 -3160836 + (CAGAGA)n Simple_repeat Simple_repeat 4 42 0 9 1832 583 255 40 30 chrX 163490068 163490273 -3160023 - MTD LTR MaLR -14 405 153 9 1832 1179 214 81 40 chrX 163490270 163490567 -3159729 - MTD LTR MaLR -107 312 4 9 1832 475 260 65 58 chrX 163491220 163491359 -3158937 - B1F1 SINE Alu -7 142 3 9 1832 549 282 121 20 chrX 163491813 163492012 -3158284 - ID_B1 SINE B4 0 224 6 9 1832 428 341 16 0 chrX 163492032 163492155 -3158141 - B1F2 SINE Alu -6 143 19 9 1832 462 240 19 70 chrX 163492193 163492350 -3157946 - L1MA4A LINE L1 -414 5889 5741 9 1832 1020 106 38 0 chrX 163492422 163492554 -3157742 - B1_Mus1 SINE Alu -11 137 1 9 1832 189 0 0 0 chrX 163493236 163493257 -3157039 + (TAA)n Simple_repeat Simple_repeat 2 22 0 9 1832 447 19 0 0 chrX 163493388 163493440 -3156856 + (TG)n Simple_repeat Simple_repeat 2 53 0 9 1832 585 264 40 8 chrX 163493460 163493586 -3156710 - RSINE1 SINE B4 -32 133 4 9 1832 578 184 8 0 chrX 163494647 163494772 -3155524 + GA-rich Low_complexity Low_complexity 2 127 0 9 1832 719 279 104 32 chrX 163494959 163495237 -3155059 + MLT1A LTR MaLR 26 323 -51 9 1832 1021 234 65 61 chrX 163495251 163495529 -3154767 - B4A SINE B4 -12 280 2 9 1832 273 322 52 0 chrX 163495569 163495684 -3154612 + MIRb SINE MIR 56 176 -92 9 1832 709 196 21 21 chrX 163495831 163495972 -3154324 - B1_Mur4 SINE Alu 0 150 10 9 1832 1349 81 40 0 chrX 163496013 163496186 -3154110 + B2_Mm2 SINE B2 2 181 -14 9 1832 194 62 0 30 chrX 163496351 163496384 -3153912 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 1832 480 253 50 93 chrX 163496385 163496518 -3153778 - RSINE1 SINE B4 -15 150 14 9 1832 1312 268 20 12 chrX 163496518 163496861 -3153435 + Lx6 LINE L1 7108 7453 -7 9 1832 822 255 63 16 chrX 163496914 163497169 -3153127 + L1MC1 LINE L1 6027 6293 -40 9 1832 513 261 0 18 chrX 163497189 163497302 -3152994 + ID_B1 SINE B4 114 224 0 9 1832 729 88 0 0 chrX 163497318 163497420 -3152876 + (GGAA)n Simple_repeat Simple_repeat 3 104 0 9 1832 719 277 71 0 chrX 163497441 163497725 -3152571 - MTE2a LTR MaLR 0 379 61 9 1832 597 263 16 60 chrX 163497784 163497966 -3152330 + B3A SINE B2 13 186 -30 1 1832 635 315 41 16 chrX 163497993 163498235 -3152061 + B4A SINE B4 1 292 0 1 1832 297 0 0 0 chrX 163498263 163498296 -3152000 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1832 800 145 7 0 chrX 163498665 163498810 -3151486 + CT-rich Low_complexity Low_complexity 4 149 0 1 1832 341 264 44 62 chrX 163498811 163498922 -3151374 - ID_B1 SINE B4 -1 223 115 1 1832 1116 137 53 21 chrX 163498922 163499109 -3151187 - ORR1B2 LTR MaLR 0 367 175 1 1832 234 0 0 0 chrX 163499134 163499160 -3151136 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1832 1057 198 74 42 chrX 163499190 163499406 -3150890 - URR1B DNA MER1_type -1 224 2 1 1832 1440 251 84 9 chrX 163499602 163499947 -3150349 + MTEb LTR MaLR 2 372 -7 1 1832 281 278 71 0 chrX 163500117 163500243 -3150053 + LTR37B LTR ERV1 169 303 -165 1 1832 473 230 8 96 chrX 163500859 163500984 -3149312 + B4A SINE B4 179 292 0 2 1832 189 0 0 0 chrX 163501072 163501093 -3149203 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1832 24 0 0 0 chrX 163501513 163501537 -3148759 + AT_rich Low_complexity Low_complexity 1 24 0 4 1832 352 327 9 0 chrX 163501710 163501820 -3148476 - ID_B1 SINE B4 -12 212 102 5 1832 674 77 0 0 chrX 163501988 163502079 -3148217 - RLTRETN_Mm LTR ERVK -231 91 1 6 1832 259 254 15 60 chrX 163502079 163502134 -3148162 - B1F2 SINE Alu -97 52 1 7 1832 24 0 0 0 chrX 163502186 163502210 -3148086 + AT_rich Low_complexity Low_complexity 1 24 0 8 1832 334 247 24 24 chrX 163502355 163502438 -3147858 - ID SINE ID -141 83 1 5 1832 494 219 56 37 chrX 163502452 163502570 -3147726 - B1F SINE Alu -19 130 11 9 1832 237 224 24 95 chrX 163503516 163503600 -3146696 + MER20 DNA MER1_type 106 183 -36 1 1832 761 276 28 64 chrX 163503603 163503886 -3146410 + B4A SINE B4 2 274 -18 1 1832 619 230 120 54 chrX 163504138 163504322 -3145974 + B3A SINE B2 1 196 -2 1 1832 216 0 0 0 chrX 163504718 163504742 -3145554 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 1 1832 201 121 0 0 chrX 163504898 163504931 -3145365 + (TTGG)n Simple_repeat Simple_repeat 1 33 0 1 1832 227 246 169 0 chrX 163504931 163504996 -3145300 - PB1D10 SINE Alu -4 113 38 1 1832 725 236 62 41 chrX 163505082 163505276 -3145020 + B3A SINE B2 1 198 0 1 1832 402 298 135 16 chrX 163505300 163505426 -3144870 + B1F2 SINE Alu 1 141 -8 1 1832 442 228 87 0 chrX 163505497 163505589 -3144707 + RSINE1 SINE B4 22 121 -44 1 1832 279 0 0 0 chrX 163505596 163505627 -3144669 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1832 459 0 0 0 chrX 163505627 163505677 -3144619 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 1832 239 260 113 57 chrX 163505695 163505710 -3144586 + MT2B LTR ERVL 153 173 -428 2 1832 463 226 198 0 chrX 163505710 163505816 -3144480 + B1_Mur2 SINE Alu 3 129 -20 2 1832 180 0 0 0 chrX 163505822 163505842 -3144454 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2 1832 335 291 8 79 chrX 163506723 163506850 -3143446 + PB1D9 SINE Alu 2 119 -1 2 1832 302 290 113 28 chrX 163506852 163506994 -3143302 + HAL1-3A_ME LINE L1 2286 2439 -419 2 1832 672 303 60 4 chrX 163507417 163507649 -3142647 + Cheshire DNA MER1_type 26 270 -2150 2 1832 25 0 0 0 chrX 163507681 163507706 -3142590 + AT_rich Low_complexity Low_complexity 1 25 0 2 1832 2820 70 100 3 chrX 163508148 163508519 -3141777 - MTB_Mm LTR MaLR 0 407 1 2 1832 387 0 0 0 chrX 163508893 163508936 -3141360 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1832 331 308 0 0 chrX 163509206 163509284 -3141012 + MER5A1 DNA MER1_type 1 78 -88 3 1832 462 255 0 0 chrX 163509290 163509384 -3140912 + RSINE1 SINE B4 11 104 -61 3 1832 602 330 10 36 chrX 163509500 163509692 -3140604 - B3A SINE B2 -6 192 6 3 1832 352 227 162 20 chrX 163509883 163509982 -3140314 - MLT1A0 LTR MaLR 0 374 262 3 1832 439 287 58 14 chrX 163509981 163510119 -3140177 - MLT1A0 LTR MaLR -213 152 9 3 1832 449 219 0 86 chrX 163510218 163510323 -3139973 - PB1D10 SINE Alu -3 114 19 3 1832 350 302 94 0 chrX 163510383 163510479 -3139817 - ID_B1 SINE B4 -8 216 112 3 1832 527 230 179 54 chrX 163510784 163510968 -3139328 + B3 SINE B2 10 216 0 3 1832 197 327 0 0 chrX 163511075 163511130 -3139166 - MIR SINE MIR -142 120 66 3 1832 540 242 8 8 chrX 163511136 163511257 -3139039 - ID_B1 SINE B4 0 224 104 3 1832 374 296 46 60 chrX 163511257 163511287 -3139009 - B1F SINE Alu 0 149 1 3 1832 291 322 0 11 chrX 163511288 163511379 -3138917 + CT-rich Low_complexity Low_complexity 6 95 0 4 1832 180 111 0 0 chrX 163511551 163511578 -3138718 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 4 1832 192 163 23 23 chrX 163511649 163511693 -3138603 + L3 LINE CR1 3088 3131 -1358 4 1832 729 266 32 16 chrX 163511793 163511980 -3138316 + ID_B1 SINE B4 2 191 -33 4 1832 1754 218 92 3 chrX 163512026 163512407 -3137889 + Lx9 LINE L1 6940 7354 -290 4 1832 910 182 87 19 chrX 163512411 163512474 -3137822 - MTB_Mm LTR MaLR -1 406 341 4 1832 246 32 0 0 chrX 163512474 163512505 -3137791 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 4 1832 910 168 58 11 chrX 163512505 163512709 -3137587 - MTB_Mm LTR MaLR -67 340 2 4 1832 1116 189 71 8 chrX 163512712 163512978 -3137318 + Lx9 LINE L1 7359 7641 -3 4 1832 415 331 83 0 chrX 163513026 163513159 -3137137 + B1F SINE Alu 3 146 -3 4 1832 246 365 21 10 chrX 163513211 163513308 -3136988 - Tigger5 DNA MER2_type -2220 186 89 4 1832 397 301 29 0 chrX 163513307 163513410 -3136886 + PB1D10 SINE Alu 5 110 -7 4 1832 430 289 109 36 chrX 163513509 163513674 -3136622 + MER20 DNA MER1_type 31 207 -12 5 1832 510 228 56 24 chrX 163513671 163513797 -3136499 + ID_B1 SINE B4 95 224 0 5 1832 902 237 9 88 chrX 163513838 163514065 -3136231 + B3 SINE B2 3 211 -5 5 1832 1442 68 20 26 chrX 163514158 163514353 -3135943 - B2_Mm2 SINE B2 0 195 2 5 1832 2170 86 0 3 chrX 163514367 163514658 -3135638 + Lx2 LINE L1 6354 6643 -354 5 1832 1547 113 0 0 chrX 163514658 163514870 -3135426 + Lx2 LINE L1 6775 6986 -11 5 1832 536 281 0 0 chrX 163515492 163515606 -3134690 + PB1D7 SINE Alu 1 114 -6 5 1832 213 238 0 0 chrX 163515608 163515650 -3134646 + GA-rich Low_complexity Low_complexity 1 42 0 5 1832 1995 181 56 56 chrX 163515678 163516052 -3134244 + ORR1D1 LTR MaLR 1 374 0 5 1832 542 358 40 0 chrX 163516438 163516614 -3133682 - ID_B1 SINE B4 -7 217 35 5 1832 263 307 10 10 chrX 163516847 163516949 -3133347 - LTR48 LTR ERV1 -211 576 475 5 1832 434 309 65 39 chrX 163517120 163517275 -3133021 + RSINE1 SINE B4 1 159 -6 6 1832 475 219 85 27 chrX 163517411 163517599 -3132697 + Lx8 LINE L1 7244 7442 -31 6 1832 312 310 0 33 chrX 163517768 163517858 -3132438 - ID_B1 SINE B4 -9 215 129 6 1832 446 238 62 11 chrX 163517931 163518042 -3132254 + B1F1 SINE Alu 12 120 0 6 1832 247 219 123 0 chrX 163518339 163518412 -3131884 - B3 SINE B2 0 216 135 6 1832 292 325 95 24 chrX 163519149 163519275 -3131021 + RSINE1 SINE B4 15 149 -16 6 1832 250 279 53 99 chrX 163519402 163519553 -3130743 - B4A SINE B4 -147 145 2 6 1832 849 108 7 20 chrX 163519632 163519783 -3130513 + (TTTC)n Simple_repeat Simple_repeat 4 152 0 6 1832 326 188 35 81 chrX 163519988 163520075 -3130221 + B3 SINE B2 134 216 0 6 1832 1044 126 102 17 chrX 163520107 163520284 -3130012 + B2_Mm2 SINE B2 3 194 -1 6 1832 22 0 0 0 chrX 163520392 163520414 -3129882 + AT_rich Low_complexity Low_complexity 1 22 0 7 1832 288 0 0 0 chrX 163520756 163520788 -3129508 + (TC)n Simple_repeat Simple_repeat 2 33 0 7 1832 221 200 22 0 chrX 163520826 163520871 -3129425 - B4A SINE B4 -245 47 2 7 1832 4541 62 16 2 chrX 163520872 163521424 -3128872 + L1_Mus3 LINE L1 6078 6637 -1 7 1832 420 315 46 0 chrX 163521424 163521532 -3128764 - ID_B1 SINE B4 -14 210 98 7 1832 570 311 67 10 chrX 163521566 163521774 -3128522 + B4A SINE B4 1 220 -72 7 1832 336 102 0 0 chrX 163521774 163521823 -3128473 + (CAGT)n Simple_repeat Simple_repeat 4 52 0 7 1832 335 241 13 0 chrX 163521828 163521907 -3128389 + ID_B1 SINE B4 145 224 0 7 1832 854 313 33 25 chrX 163522061 163522421 -3127875 + L1MB7 LINE L1 5687 6049 -135 7 1832 391 291 42 80 chrX 163522439 163522652 -3127644 - MER58B DNA MER1_type -134 207 3 7 1832 931 218 16 11 chrX 163522976 163523166 -3127130 - B3 SINE B2 -6 210 20 8 1832 302 229 211 44 chrX 163523487 163523527 -3126769 - ID_B1 SINE B4 0 224 92 8 1832 314 268 0 40 chrX 163523527 163523601 -3126695 - PB1D10 SINE Alu -36 81 11 8 1832 2071 120 9 68 chrX 163523633 163523973 -3126323 - ORR1A2 LTR MaLR -7 320 1 8 1832 494 290 7 52 chrX 163524245 163524398 -3125898 - ID_B1 SINE B4 0 224 79 8 1832 858 263 71 31 chrX 163524404 163524422 -3125874 - L1MB8 LINE L1 -51 6127 6111 8 1832 519 276 74 7 chrX 163524422 163524557 -3125739 + B1_Mur3 SINE Alu 5 148 -1 8 1832 1204 74 11 6 chrX 163524563 163524740 -3125556 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 8 1832 858 263 71 31 chrX 163524740 163525095 -3125201 - L1MB8 LINE L1 -72 6106 5732 8 1832 1302 259 41 12 chrX 163525099 163525419 -3124877 + MTE2a LTR MaLR 1 329 -50 8 1832 388 252 50 42 chrX 163525424 163525544 -3124752 - L1MB8 LINE L1 -450 5728 5608 8 1832 397 328 7 55 chrX 163525572 163525717 -3124579 + ID_B1 SINE B4 64 201 -23 8 1832 565 246 26 9 chrX 163525607 163525722 -3124574 + B1F SINE Alu 12 128 -21 9 1832 525 208 78 8 chrX 163525788 163525977 -3124319 - L1MB8 LINE L1 -661 5510 5298 8 1832 361 229 36 0 chrX 163525977 163525988 -3124308 - PB1D10 SINE Alu 0 117 107 9 1832 207 88 0 0 chrX 163525988 163526022 -3124274 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 9 1832 361 229 36 0 chrX 163526022 163526093 -3124203 - PB1D10 SINE Alu -11 106 33 9 1832 203 208 0 19 chrX 163526095 163526149 -3124147 + (TTTA)n Simple_repeat Simple_repeat 3 55 0 9 1832 690 274 67 0 chrX 163526153 163526332 -3123964 - ID_B1 SINE B4 -19 205 15 9 1832 630 0 0 0 chrX 163527700 163527770 -3122526 + (TTC)n Simple_repeat Simple_repeat 2 71 0 9 1832 463 252 51 17 chrX 163527826 163527943 -3122353 + RSINE1 SINE B4 43 163 -2 9 1832 753 278 56 5 chrX 163528133 163528328 -3121968 - B3 SINE B2 0 216 12 9 1832 1273 262 42 109 chrX 163528768 163529170 -3121126 - MTE2a LTR MaLR -3 376 2 9 1832 462 324 47 0 chrX 163529190 163529338 -3120958 - ID_B1 SINE B4 -69 155 1 9 1832 520 260 86 8 chrX 163529637 163529765 -3120531 - B1F SINE Alu -8 141 4 1 1832 331 264 45 22 chrX 163530499 163530588 -3119708 + B4 SINE B4 1 91 -201 1 1832 47 0 0 0 chrX 163530670 163530717 -3119579 + AT_rich Low_complexity Low_complexity 1 47 0 1 1832 372 267 75 9 chrX 163530905 163531011 -3119285 - B1F SINE Alu 0 149 37 1 1832 537 261 148 13 chrX 163531524 163531679 -3118617 + ID_B1 SINE B4 5 180 -44 1 1832 369 0 0 0 chrX 163531685 163531726 -3118570 + (TC)n Simple_repeat Simple_repeat 1 41 0 1 1832 243 0 0 0 chrX 163531737 163531764 -3118532 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1832 859 261 90 5 chrX 163532029 163532229 -3118067 - ID_B1 SINE B4 -5 219 3 1 1832 313 295 21 21 chrX 163532314 163532411 -3117885 + B4 SINE B4 6 102 -190 1 1832 277 297 21 21 chrX 163532438 163532531 -3117765 + B4A SINE B4 194 286 -6 1 1832 21 0 0 0 chrX 163532651 163532672 -3117624 + AT_rich Low_complexity Low_complexity 1 21 0 1 1832 366 274 93 9 chrX 163532672 163532779 -3117517 - PB1D7 SINE Alu 0 120 5 1 1832 404 258 45 0 chrX 163532698 163532787 -3117509 - ID_B1 SINE B4 -54 170 78 1 1832 1475 117 0 35 chrX 163532797 163533028 -3117268 - Lx2 LINE L1 0 6997 6775 1 1832 595 80 0 11 chrX 163533028 163533116 -3117180 - Lx2 LINE L1 -354 6643 6557 1 1832 372 290 137 0 chrX 163533117 163533248 -3117048 - B1F1 SINE Alu 0 149 1 1 1832 334 232 22 99 chrX 163533448 163533539 -3116757 + ID_B1 SINE B4 137 220 -4 1 1832 342 45 0 0 chrX 163533549 163533593 -3116703 + (CAAAAA)n Simple_repeat Simple_repeat 2 45 0 1 1832 254 247 22 110 chrX 163533880 163533903 -3116393 - PB1D10 SINE Alu -1 116 34 1 1832 317 176 147 0 chrX 163533903 163533971 -3116325 - ID_B1 SINE B4 -32 192 115 1 1832 553 305 0 0 chrX 163534061 163534202 -3116094 - B1F SINE Alu -6 143 3 1 1832 180 0 0 0 chrX 163534259 163534279 -3116017 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 1832 189 0 0 0 chrX 163534279 163534299 -3115997 + (GA)n Simple_repeat Simple_repeat 1 21 0 1 1832 245 354 87 87 chrX 163534363 163534536 -3115760 - B4 SINE B4 -118 174 2 1 1832 334 311 0 29 chrX 163534653 163534789 -3115507 + L1ME1 LINE L1 5740 5871 -308 1 1832 440 311 14 7 chrX 163534791 163534939 -3115357 + ID_B1 SINE B4 1 155 -137 1 1832 197 132 0 26 chrX 163534996 163535035 -3115261 + GA-rich Low_complexity Low_complexity 3 40 0 1 1832 435 216 0 64 chrX 163535216 163535310 -3114986 + ID_B1 SINE B4 130 217 -7 1 1832 234 0 0 0 chrX 163535384 163535410 -3114886 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 1832 747 87 0 0 chrX 163535519 163535623 -3114673 + (GAGAA)n Simple_repeat Simple_repeat 1 104 0 1 1832 1228 73 0 22 chrX 163535623 163535806 -3114490 + (GGGAGA)n Simple_repeat Simple_repeat 2 180 0 1 1832 439 267 39 55 chrX 163535824 163536006 -3114290 + L1ME1 LINE L1 5960 6138 -41 1 1832 834 278 26 0 chrX 163536244 163536435 -3113861 + ID_B1 SINE B4 8 203 -21 1 1832 198 0 0 0 chrX 163536443 163536465 -3113831 + (GAAA)n Simple_repeat Simple_repeat 3 24 0 1 1832 953 163 6 0 chrX 163536465 163536643 -3113653 + GA-rich Low_complexity Low_complexity 2 180 0 1 1832 455 318 89 60 chrX 163537986 163538234 -3112062 + B4 SINE B4 36 290 -2 1 1832 1189 128 50 6 chrX 163538284 163538465 -3111831 + B2_Mm2 SINE B2 2 190 -5 1 1832 568 290 155 36 chrX 163538513 163538706 -3111590 + ID_B1 SINE B4 1 216 -8 1 1832 563 327 35 18 chrX 163539043 163539270 -3111026 - MLT1D LTR MaLR -3 502 272 1 1832 822 177 35 0 chrX 163539382 163539523 -3110773 - B1_Mur4 SINE Alu -4 146 1 1 1832 654 282 54 24 chrX 163539613 163539780 -3110516 + ID_B1 SINE B4 2 173 -51 1 1832 401 306 31 0 chrX 163539694 163539792 -3110504 + PB1D10 SINE Alu 7 107 -10 1 1832 197 282 69 23 chrX 163540856 163540943 -3109353 + MIR SINE MIR 116 206 -56 1 1832 647 232 0 14 chrX 163541032 163541172 -3109124 + B1F SINE Alu 4 141 -8 1 1832 990 132 0 0 chrX 163542547 163542706 -3107590 + (TTTC)n Simple_repeat Simple_repeat 2 160 0 1 1832 636 231 9 15 chrX 163543436 163543576 -3106720 + ID_B1 SINE B4 110 248 -44 1 1832 485 240 46 15 chrX 163544336 163544467 -3105829 - ID_B1 SINE B4 0 224 90 1 1832 888 158 0 0 chrX 163545790 163545923 -3104373 + B1_Mur1 SINE Alu 15 147 -2 1 1832 317 246 0 16 chrX 163546068 163546130 -3104166 - ID4 SINE ID -1 82 22 1 1832 214 293 35 0 chrX 163547002 163547060 -3103236 - MIR3 SINE MIR -35 173 114 1 1832 229 105 0 66 chrX 163548412 163548473 -3101823 + (TCTCTG)n Simple_repeat Simple_repeat 2 58 0 1 1832 414 0 0 0 chrX 163548507 163548553 -3101743 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1832 486 0 0 0 chrX 163548553 163548606 -3101690 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 1832 235 338 0 0 chrX 163548846 163548914 -3101382 - tRNA-Ala-GCA tRNA tRNA -7 68 1 1 1832 237 211 0 0 chrX 163548929 163548981 -3101315 + (CAT)n Simple_repeat Simple_repeat 2 53 0 1 1832 364 258 0 106 chrX 163548985 163549089 -3101207 - PB1D10 SINE Alu -6 111 19 1 1832 291 246 261 60 chrX 163549089 163549119 -3101177 - ID_B1 SINE B4 -6 218 58 1 1832 271 306 20 10 chrX 163549108 163549207 -3101089 - PB1D10 SINE Alu -12 105 6 1 1832 228 35 0 0 chrX 163549762 163549791 -3100505 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1832 630 269 7 0 chrX 163549820 163549961 -3100335 - RSINE1 SINE B4 -21 144 3 1 1832 386 38 0 19 chrX 163549966 163550019 -3100277 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 1 1832 539 227 226 7 chrX 163550041 163550196 -3100100 + ID_B1 SINE B4 2 190 -34 1 1832 305 207 78 52 chrX 163550176 163550329 -3099967 - RMER17D2 LTR ERVK -270 539 383 1 1832 384 228 163 0 chrX 163550426 163550518 -3099778 - PB1D9 SINE Alu -13 107 1 1 1832 948 117 0 0 chrX 163551043 163551188 -3099108 + (GAAA)n Simple_repeat Simple_repeat 4 148 0 1 1832 344 221 9 95 chrX 163551215 163551320 -3098976 + MT2B LTR ERVL 162 257 -344 1 1832 706 165 8 23 chrX 163551226 163551356 -3098940 + B1_Mur4 SINE Alu 11 138 -12 1 1832 228 286 0 0 chrX 163551516 163551565 -3098731 + ID2 SINE ID 5 53 -30 1 1832 418 230 192 51 chrX 163552302 163552458 -3097838 + B3A SINE B2 5 182 -16 1 1832 514 189 11 0 chrX 163552955 163553050 -3097246 + ID_B1 SINE B4 129 224 0 1 1832 231 240 80 0 chrX 163554402 163554452 -3095844 + RSINE1 SINE B4 57 110 -55 1 1832 567 183 19 0 chrX 163554476 163554580 -3095716 - ID_B1 SINE B4 0 224 119 1 1832 242 284 43 64 chrX 163555005 163555099 -3095197 - MIRc SINE MIR -94 174 83 1 1832 493 296 27 34 chrX 163555156 163555303 -3094993 - ID_B1 SINE B4 0 224 79 1 1832 414 339 80 21 chrX 163555457 163555695 -3094601 + MIRb SINE MIR 9 260 -8 1 1832 635 303 91 8 chrX 163555710 163555953 -3094343 + B4A SINE B4 1 263 -29 1 1832 326 389 36 57 chrX 163555961 163556209 -3094087 - LTR40a LTR ERVL -239 280 38 1 1832 661 320 17 21 chrX 163556272 163556508 -3093788 - B4A SINE B4 -55 237 3 1 1832 284 281 62 0 chrX 163556701 163556765 -3093531 + ID4 SINE ID 5 72 -11 1 1832 201 74 0 0 chrX 163556797 163556824 -3093472 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1832 196 391 9 9 chrX 163557193 163557304 -3092992 + MER5B DNA MER1_type 44 154 -24 1 1832 182 337 63 63 chrX 163557680 163557886 -3092410 + MIRb SINE MIR 55 260 -8 1 1832 384 284 84 37 chrX 163557929 163558119 -3092177 + MER5C DNA MER1_type 23 221 -92 1 1832 549 352 143 0 chrX 163558334 163558564 -3091732 - MLT1E1A LTR MaLR -16 664 402 1 1832 292 330 22 0 chrX 163558595 163558686 -3091610 - MLT1E1A LTR MaLR -410 150 58 1 1832 375 23 0 0 chrX 163558721 163558765 -3091531 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1832 835 171 0 46 chrX 163558848 163559001 -3091295 + B1_Mm SINE Alu 2 147 0 1 1832 591 283 6 56 chrX 163559924 163560085 -3090211 + RSINE1 SINE B4 11 163 -2 1 1832 806 285 35 43 chrX 163560094 163560182 -3090114 + MLT1A1 LTR MaLR 142 230 -178 1 1832 1665 53 0 5 chrX 163560182 163560390 -3089906 + L1Md_F3 LINE L1 6378 6584 0 1 1832 806 285 35 43 chrX 163560390 163560558 -3089738 + MLT1A1 LTR MaLR 231 396 -12 1 1832 278 270 16 0 chrX 163560900 163560963 -3089333 - ID4_ SINE ID -19 64 1 1 1832 429 244 0 0 chrX 163561084 163561166 -3089130 - ID SINE ID -142 82 1 1 1832 580 243 225 6 chrX 163561620 163561802 -3088494 - ID_B1 SINE B4 -2 222 1 1 1832 852 204 0 13 chrX 163561881 163562030 -3088266 - B1_Mur1 SINE Alu -2 147 1 1 1832 308 140 0 0 chrX 163562037 163562094 -3088202 - MER33 DNA MER1_type -104 220 164 1 1832 454 264 82 0 chrX 163562099 163562209 -3088087 + B1F SINE Alu 18 136 -13 1 1832 345 318 14 43 chrX 163562223 163562361 -3087935 - MER33 DNA MER1_type -178 146 13 1 1832 230 187 0 26 chrX 163562651 163562728 -3087568 + (CAGAGA)n Simple_repeat Simple_repeat 4 78 0 1 1832 562 282 25 96 chrX 163563187 163563344 -3086952 + RSINE1 SINE B4 3 148 -17 1 1832 279 79 0 0 chrX 163563344 163563382 -3086914 + (CATA)n Simple_repeat Simple_repeat 4 41 0 1 1832 589 335 55 68 chrX 163563424 163563652 -3086644 + B4A SINE B4 3 230 -62 1 1832 216 0 0 0 chrX 163563652 163563676 -3086620 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1832 589 335 55 68 chrX 163563676 163563739 -3086557 + B4A SINE B4 231 290 -2 1 1832 286 80 0 39 chrX 163563759 163563811 -3086485 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1832 770 269 15 73 chrX 163563829 163564034 -3086262 - B3A SINE B2 -5 193 1 1 1832 219 299 30 0 chrX 163564040 163564107 -3086189 - ID4_ SINE ID 0 83 15 1 1832 270 130 93 0 chrX 163564295 163564349 -3085947 + ID4_ SINE ID 2 60 -23 1 1832 803 246 21 26 chrX 163564578 163564770 -3085526 - ID_B1 SINE B4 -2 222 32 2 1832 465 289 0 0 chrX 163564880 163564970 -3085326 - B1F1 SINE Alu -57 92 3 2 1832 183 80 0 0 chrX 163565099 163565124 -3085172 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2 1832 354 349 85 15 chrX 163566126 163566327 -3083969 + Charlie1b DNA MER1_type 95 309 -214 2 1832 942 236 24 19 chrX 163566367 163566579 -3083717 - ID_B1 SINE B4 -10 214 2 2 1832 506 237 0 0 chrX 163566604 163566701 -3083595 + B1_Mur3 SINE Alu 1 97 -52 2 1832 681 13 0 0 chrX 163566730 163566808 -3083488 + (TA)n Simple_repeat Simple_repeat 1 78 0 2 1832 723 276 0 7 chrX 163566874 163567016 -3083280 + RSINE1 SINE B4 3 143 -22 2 1832 327 49 0 0 chrX 163567034 163567075 -3083221 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 2 1832 392 310 0 50 chrX 163567241 163567360 -3082936 + PB1D7 SINE Alu 5 117 -3 2 1832 2837 78 0 8 chrX 163567921 163568281 -3082015 + L1_Mus1 LINE L1 6211 6567 0 2 1832 208 303 11 43 chrX 163568852 163568945 -3081351 - L2b LINE L2 -11 3376 3275 2 1832 856 291 53 5 chrX 163569369 163569576 -3080720 - ID_B1 SINE B4 -2 222 6 2 1832 216 0 0 0 chrX 163569589 163569613 -3080683 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 1832 241 228 6 6 chrX 163569613 163569673 -3080623 - PB1D10 SINE Alu -12 115 56 2 1832 484 235 124 7 chrX 163569908 163570045 -3080251 - RSINE1 SINE B4 -2 163 11 2 1832 340 250 0 65 chrX 163570735 163570812 -3079484 - ID_B1 SINE B4 -73 151 80 2 1832 365 345 8 0 chrX 163571583 163571702 -3078594 + PB1D7 SINE Alu 1 120 0 2 1832 204 214 0 23 chrX 163571702 163571745 -3078551 + G-rich Low_complexity Low_complexity 1 42 0 2 1832 519 138 0 0 chrX 163571745 163571832 -3078464 + (GAA)n Simple_repeat Simple_repeat 3 89 0 2 1832 363 305 99 52 chrX 163571833 163572044 -3078252 + ID_B1 SINE B4 1 221 -3 2 1832 621 222 95 0 chrX 163572687 163572813 -3077483 + B1_Mur1 SINE Alu 3 140 -9 2 1832 230 192 19 19 chrX 163572930 163572983 -3077313 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 2 1832 871 142 7 22 chrX 163572998 163573135 -3077161 - B1_Mur4 SINE Alu -14 136 2 2 1832 378 229 41 20 chrX 163573537 163573635 -3076661 - MTD LTR MaLR -319 100 1 2 1832 473 267 0 33 chrX 163573845 163573965 -3076331 + PB1D10 SINE Alu 2 117 0 2 1832 776 265 99 10 chrX 163574788 163574990 -3075306 - ID_B1 SINE B4 -4 220 1 2 1832 708 295 18 62 chrX 163575578 163575802 -3074494 + B3 SINE B2 3 216 0 2 1832 1060 258 5 13 chrX 163576177 163576401 -3073895 + ID_B1 SINE B4 3 224 0 2 1832 542 309 87 16 chrX 163576418 163576580 -3073716 + B3A SINE B2 2 177 -21 2 1832 273 98 0 0 chrX 163576580 163576621 -3073675 + (CATATA)n Simple_repeat Simple_repeat 6 46 0 2 1832 542 309 87 16 chrX 163576621 163576642 -3073654 + B3A SINE B2 178 198 0 2 1832 339 315 93 23 chrX 163577648 163577820 -3072476 - MER58A DNA MER1_type -15 209 26 2 1833 683 244 250 0 chrX 163578572 163578740 -3071556 + B3 SINE B2 2 211 -5 2 1833 462 18 0 0 chrX 163578770 163578825 -3071471 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1833 365 267 0 0 chrX 163578825 163578900 -3071396 + PB1D10 SINE Alu 13 87 -30 2 1833 866 180 6 0 chrX 163578931 163579109 -3071187 + GA-rich Low_complexity Low_complexity 1 179 0 2 1833 1512 170 33 4 chrX 163579109 163579381 -3070915 - RMER19B LTR ERVK -622 280 1 2 1833 591 237 0 0 chrX 163579506 163579624 -3070672 + PB1D9 SINE Alu 1 118 -2 2 1833 255 347 0 0 chrX 163580644 163580716 -3069580 - ID4_ SINE ID -9 74 3 2 1833 849 142 0 0 chrX 163580803 163580944 -3069352 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 2 1833 364 243 86 51 chrX 163580946 163581063 -3069233 - B1F2 SINE Alu -15 134 14 2 1833 791 301 26 0 chrX 163580960 163581153 -3069143 - ID_B1 SINE B4 -23 201 4 2 1833 548 279 26 52 chrX 163581188 163581343 -3068953 - MER20 DNA MER1_type -63 156 6 2 1833 938 152 258 22 chrX 163581384 163581566 -3068730 + URR1A DNA MER1_type 1 225 -1 2 1833 357 292 11 11 chrX 163582602 163582692 -3067604 - ID_B1 SINE B4 -52 172 83 2 1833 326 286 45 0 chrX 163582976 163583088 -3067208 - L1ME2z LINE L1 0 6444 6328 2 1833 237 267 111 106 chrX 163584074 163584254 -3066042 + RMER21A LTR ERV1 559 739 -208 2 1833 306 0 0 0 chrX 163584307 163584341 -3065955 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1833 679 274 119 58 chrX 163584797 163585057 -3065239 - MTEa LTR MaLR -103 276 1 2 1833 640 273 57 47 chrX 163585929 163586121 -3064175 - B3A SINE B2 -4 194 1 2 1833 524 200 130 0 chrX 163586129 163586244 -3064052 - ID_B1 SINE B4 -5 219 90 2 1833 226 304 143 0 chrX 163586159 163586271 -3064025 + LTR16D1 LTR ERVL 106 233 -442 2 1833 2456 142 50 0 chrX 163586302 163586681 -3063615 + RMER10B LTR ERVL 1 398 0 2 1833 401 227 78 49 chrX 163586862 163586964 -3063332 + PB1D10 SINE Alu 4 108 -9 2 1833 627 289 27 91 chrX 163587129 163587350 -3062946 + ID_B1 SINE B4 1 207 -17 2 1833 1113 221 14 5 chrX 163588009 163588223 -3062073 + B3 SINE B2 1 216 0 2 1833 705 214 18 89 chrX 163588486 163588655 -3061641 + RSINE1 SINE B4 8 164 -1 2 1833 341 278 117 64 chrX 163588655 163588667 -3061629 + B3A SINE B2 61 198 0 2 1833 520 246 0 0 chrX 163588704 163588818 -3061478 + PB1D10 SINE Alu 2 115 -2 2 1833 275 279 0 95 chrX 163589917 163590012 -3060284 + B4 SINE B4 76 161 -131 2 1833 410 231 55 18 chrX 163589935 163590045 -3060251 + PB1D10 SINE Alu 7 120 0 2 1833 350 261 10 42 chrX 163590212 163590308 -3059988 + RSINE1 SINE B4 1 93 -72 2 1833 600 53 0 0 chrX 163590318 163590394 -3059902 + (CA)n Simple_repeat Simple_repeat 1 76 0 2 1833 231 213 0 0 chrX 163590397 163590472 -3059824 + (CAGA)n Simple_repeat Simple_repeat 2 76 0 2 1833 192 40 0 0 chrX 163590564 163590589 -3059707 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2 1833 186 271 68 86 chrX 163591491 163591608 -3058688 + L2a LINE L2 3219 3333 -93 2 1833 341 268 20 10 chrX 163591706 163591804 -3058492 + L1MA10 LINE L1 6226 6324 -10 2 1833 1213 294 68 3 chrX 163592024 163592380 -3057916 - MTE2b LTR MaLR 0 421 1 2 1833 464 281 242 0 chrX 163592450 163592628 -3057668 - ID_B1 SINE B4 0 224 4 2 1833 982 272 5 40 chrX 163592640 163592740 -3057556 - ID_B1 SINE B4 -8 216 125 2 1833 1014 151 222 0 chrX 163592740 163592925 -3057371 - URR1A DNA MER1_type 0 226 1 2 1833 982 272 5 40 chrX 163592925 163593046 -3057250 - ID_B1 SINE B4 -100 124 3 2 1833 261 0 0 0 chrX 163593292 163593321 -3056975 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1833 615 270 47 0 chrX 163593418 163593566 -3056730 - ID_B1 SINE B4 -62 162 8 2 1833 309 273 15 0 chrX 163593943 163594009 -3056287 - ID4 SINE ID -5 78 12 2 1833 387 0 0 0 chrX 163594027 163594070 -3056226 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 2 1833 1093 102 0 0 chrX 163594070 163594207 -3056089 - B1_Mus1 SINE Alu -10 138 2 2 1833 342 146 0 0 chrX 163594829 163594884 -3055412 - ID_B1 SINE B4 0 224 170 2 1833 327 101 59 63 chrX 163594884 163594900 -3055396 - PB1D7 SINE Alu -3 122 55 2 1833 278 277 0 15 chrX 163594911 163594977 -3055319 - ID SINE ID -158 66 2 2 1833 623 176 0 8 chrX 163595251 163595377 -3054919 + GA-rich Low_complexity Low_complexity 2 126 0 2 1833 308 297 15 106 chrX 163595455 163595587 -3054709 - BC1_Mm scRNA scRNA -32 120 1 2 1833 678 282 77 30 chrX 163596021 163596255 -3054041 + RMER5 LTR ERV1 50 294 -240 2 1833 2728 199 163 40 chrX 163596255 163596871 -3053425 - Lx9 LINE L1 -8 7636 6943 2 1833 1219 74 0 0 chrX 163596871 163597019 -3053277 + B1_Mus1 SINE Alu 1 148 0 2 1833 2728 208 18 46 chrX 163597019 163597105 -3053191 - Lx9 LINE L1 -702 6942 6860 2 1833 618 280 35 61 chrX 163597105 163597333 -3052963 + RMER5 LTR ERV1 279 500 -34 2 1833 681 286 5 52 chrX 163597343 163597535 -3052761 - ID_B1 SINE B4 -40 184 2 2 1833 348 221 35 11 chrX 163597869 163597956 -3052340 - RMER30 DNA MER1_type -111 91 3 2 1833 231 281 96 70 chrX 163598943 163599100 -3051196 + L2a LINE L2 3004 3164 -262 2 1833 194 303 44 35 chrX 163599471 163599584 -3050712 + L2a LINE L2 3274 3387 0 2 1833 273 57 0 0 chrX 163600195 163600230 -3050066 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 1833 318 67 0 0 chrX 163600230 163600274 -3050022 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1833 640 282 38 6 chrX 163600285 163600442 -3049854 - B3A SINE B2 -36 162 1 2 1833 321 169 0 0 chrX 163601252 163601311 -3048985 + CT-rich Low_complexity Low_complexity 3 61 0 2 1833 455 290 63 50 chrX 163601311 163601464 -3048832 - ID_B1 SINE B4 -16 208 71 2 1833 405 0 0 0 chrX 163601466 163601511 -3048785 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1833 211 224 102 0 chrX 163602144 163602193 -3048103 - MIR3 SINE MIR -12 196 143 2 1833 204 40 0 0 chrX 163603499 163603524 -3046772 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2 1833 564 273 0 0 chrX 163603525 163603653 -3046643 - ID_B1 SINE B4 0 224 97 2 1833 273 365 72 14 chrX 163604016 163604238 -3046058 - MIR SINE MIR -5 257 23 2 1833 3247 141 11 42 chrX 163604238 163604779 -3045517 - RLTR28 LTR ERVL 0 524 1 2 1833 1044 124 0 0 chrX 163606145 163606323 -3043973 + (GA)n Simple_repeat Simple_repeat 2 179 0 2 1833 326 324 52 58 chrX 163606323 163606477 -3043819 - RSINE1 SINE B4 -10 155 3 2 1833 470 338 82 85 chrX 163606479 163606838 -3043458 - MLT1D LTR MaLR -57 448 82 3 1833 1457 230 108 9 chrX 163606838 163607180 -3043116 + MTEa LTR MaLR 1 376 -3 3 1833 470 338 82 85 chrX 163607180 163607269 -3043027 - MLT1D LTR MaLR -424 81 1 3 1833 576 278 104 18 chrX 163608484 163608704 -3041592 + L1MD3 LINE L1 7733 7971 -24 3 1833 631 230 195 16 chrX 163608835 163609025 -3041271 + B4A SINE B4 1 224 -68 3 1833 21 36 0 0 chrX 163609186 163609214 -3041082 + AT_rich Low_complexity Low_complexity 1 28 0 3 1833 558 43 0 0 chrX 163610679 163610748 -3039548 + (TTTTC)n Simple_repeat Simple_repeat 2 70 0 3 1833 308 259 12 0 chrX 163610901 163610982 -3039314 + MER5A1 DNA MER1_type 61 142 -24 3 1833 215 296 95 56 chrX 163611577 163611756 -3038540 + L2a LINE L2 3199 3384 -42 3 1833 536 95 0 12 chrX 163612180 163612265 -3038031 + (GAAA)n Simple_repeat Simple_repeat 1 84 0 3 1833 358 176 63 63 chrX 163612816 163612895 -3037401 - ID4 SINE ID -4 79 1 3 1833 222 228 17 34 chrX 163613176 163613235 -3037061 - ID SINE ID -166 58 1 3 1833 212 330 75 0 chrX 163613636 163613742 -3036554 - MIR3 SINE MIR -27 181 68 3 1833 456 234 129 0 chrX 163613892 163614016 -3036280 - ID_B1 SINE B4 -4 220 81 3 1833 358 253 0 0 chrX 163615464 163615543 -3034753 + ID_B1 SINE B4 144 222 -2 3 1833 623 13 13 0 chrX 163615550 163615626 -3034670 + (GA)n Simple_repeat Simple_repeat 2 78 0 3 1833 462 307 0 85 chrX 163615760 163615924 -3034372 + RSINE1 SINE B4 12 161 -4 3 1833 225 0 0 0 chrX 163615936 163615961 -3034335 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 1833 671 250 7 0 chrX 163617401 163617537 -3032759 - B1_Mur1 SINE Alu -12 137 1 3 1833 738 244 97 24 chrX 163617542 163617748 -3032548 - ID_B1 SINE B4 -2 222 2 3 1833 541 246 61 0 chrX 163618696 163618810 -3031486 + ID_B1 SINE B4 76 196 -28 3 1833 22 88 0 0 chrX 163619513 163619570 -3030726 + AT_rich Low_complexity Low_complexity 1 57 0 3 1833 375 333 82 27 chrX 163619637 163619856 -3030440 + B4 SINE B4 1 231 -61 3 1833 418 321 160 0 chrX 163619855 163619986 -3030310 + RSINE1 SINE B4 5 156 -9 3 1833 378 57 0 0 chrX 163620010 163620063 -3030233 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 3 1833 294 29 0 0 chrX 163620119 163620154 -3030142 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1833 750 279 166 4 chrX 163622779 163623038 -3027258 + MTEa LTR MaLR 1 301 -78 3 1833 198 0 0 0 chrX 163623047 163623069 -3027227 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 3 1833 317 284 39 0 chrX 163623151 163623253 -3027043 + MLT1E1A LTR MaLR 102 207 -473 3 1833 243 279 44 0 chrX 163623325 163623393 -3026903 + PB1D7 SINE Alu 19 89 -31 3 1833 307 349 23 45 chrX 163623396 163623573 -3026723 + MLT1E1A LTR MaLR 479 651 -29 3 1833 231 281 12 24 chrX 163623809 163623893 -3026403 + L1M5 LINE L1 5582 5664 -500 3 1833 395 262 136 0 chrX 163624009 163624112 -3026184 + RSINE1 SINE B4 4 120 -45 3 1833 683 89 110 31 chrX 163624132 163624259 -3026037 - URR1B DNA MER1_type 0 225 89 3 1833 213 182 18 18 chrX 163624832 163624888 -3025408 + T-rich Low_complexity Low_complexity 5 60 0 3 1833 183 156 0 0 chrX 163626243 163626275 -3024021 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 1833 886 331 11 14 chrX 163626275 163626560 -3023736 + B4A SINE B4 9 292 0 3 1833 350 121 15 0 chrX 163626565 163626631 -3023665 + (TC)n Simple_repeat Simple_repeat 2 68 0 3 1833 237 33 0 0 chrX 163626631 163626661 -3023635 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1833 571 235 17 0 chrX 163626950 163627065 -3023231 + B3 SINE B2 66 182 -34 3 1833 347 288 106 67 chrX 163627798 163627894 -3022402 - L1MD3 LINE L1 -110 7675 7562 3 1833 2424 92 3 15 chrX 163627894 163628225 -3022071 - ORR1A2 LTR MaLR 0 327 1 3 1833 364 261 55 76 chrX 163628225 163628411 -3021885 - L1MD3 LINE L1 -224 7771 7593 3 1833 354 45 0 0 chrX 163628413 163628457 -3021839 + (TCC)n Simple_repeat Simple_repeat 3 46 0 3 1833 261 0 0 0 chrX 163628569 163628598 -3021698 + (TTG)n Simple_repeat Simple_repeat 1 29 0 3 1833 476 320 40 27 chrX 163628711 163628950 -3021346 - L1MD3 LINE L1 -448 7547 7085 3 1833 7477 112 14 4 chrX 163629196 163630242 -3020054 + L1_Mus4 LINE L1 5064 6125 -511 3 1833 2637 65 59 0 chrX 163630242 163630581 -3019715 + RLTR10D LTR ERVK 1 359 0 3 1833 7477 78 26 8 chrX 163630581 163631087 -3019209 + L1_Mus4 LINE L1 6126 6636 0 3 1833 418 269 11 40 chrX 163631105 163631279 -3019017 - MER63D DNA AcHobo -767 294 126 3 1833 600 134 0 0 chrX 163631284 163631381 -3018915 + (TTTC)n Simple_repeat Simple_repeat 4 100 0 3 1833 1003 225 32 14 chrX 163631382 163631394 -3018902 - ID_B1 SINE B4 0 224 213 3 1833 1387 28 0 22 chrX 163631394 163631576 -3018720 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 3 1833 1003 225 32 14 chrX 163631576 163631779 -3018517 - ID_B1 SINE B4 -12 212 6 3 1833 595 294 20 6 chrX 163632432 163632637 -3017659 - LTR31 LTR ERV1 -268 500 144 3 1833 373 258 41 24 chrX 163633733 163633856 -3016440 - B1F SINE Alu 0 149 25 3 1833 1664 204 211 6 chrX 163633892 163634360 -3015936 + RMER15 LTR ERVL 12 575 0 3 1833 495 290 126 91 chrX 163634393 163634996 -3015300 + L1MC4 LINE L1 7197 7820 -222 3 1833 867 248 9 27 chrX 163635144 163635364 -3014932 - B3 SINE B2 0 216 1 3 1833 207 0 0 0 chrX 163635971 163635994 -3014302 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1833 213 169 16 48 chrX 163636429 163636491 -3013805 + T-rich Low_complexity Low_complexity 5 64 0 3 1833 478 300 86 18 chrX 163636901 163637064 -3013232 - B3A SINE B2 -24 174 1 3 1833 342 166 0 0 chrX 163637071 163637134 -3013162 - B1F SINE Alu -3 146 52 3 1833 315 0 0 0 chrX 163637551 163637586 -3012710 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1833 713 291 72 75 chrX 163638089 163638449 -3011847 + ORR1E LTR MaLR 1 359 0 3 1833 288 0 0 0 chrX 163638656 163638688 -3011608 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1833 248 262 0 4 chrX 163639203 163639266 -3011030 + L2b LINE L2 3304 3409 -17 3 1833 582 109 0 0 chrX 163639683 163639775 -3010521 + (TC)n Simple_repeat Simple_repeat 1 92 0 3 1833 527 295 0 16 chrX 163639777 163639901 -3010395 - B1F2 SINE Alu -17 132 11 3 1833 238 313 16 74 chrX 163640077 163640198 -3010098 - B4A SINE B4 -16 276 163 3 1833 246 32 0 0 chrX 163640220 163640251 -3010045 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1833 511 230 0 143 chrX 163640264 163640411 -3009885 - RSINE1 SINE B4 -38 127 2 3 1833 440 260 10 0 chrX 163640418 163640522 -3009774 - ID_B1 SINE B4 -1 223 119 3 1833 241 262 119 55 chrX 163640854 163640963 -3009333 + PB1D10 SINE Alu 2 117 0 3 1833 512 68 14 0 chrX 163641455 163641528 -3008768 + (TCC)n Simple_repeat Simple_repeat 3 76 0 3 1833 306 282 27 18 chrX 163642752 163642864 -3007432 - PB1D7 SINE Alu -7 113 1 3 1833 683 254 180 0 chrX 163643311 163643500 -3006796 - ID_B1 SINE B4 0 224 2 3 1833 217 352 0 0 chrX 163645740 163645831 -3004465 + C-rich Low_complexity Low_complexity 1 91 0 3 1833 564 252 8 0 chrX 163649328 163649398 -3000898 + ID SINE ID 14 84 -140 3 1833 220 208 122 27 chrX 163649398 163649472 -3000824 + B1F SINE Alu 4 84 -65 3 1833 414 0 0 0 chrX 163649756 163649802 -3000494 + (TAA)n Simple_repeat Simple_repeat 2 47 0 3 1833 232 296 46 35 chrX 163650445 163650568 -2999728 - MIRm SINE MIR -50 212 82 3 1833 212 314 98 41 chrX 163651135 163651258 -2999038 - MIR SINE MIR -90 172 43 3 1833 36160 36 1 0 chrX 163651295 163657146 -2993150 + L1Md_T LINE L1 1 5589 -297 3 1833 9054 6 0 0 chrX 163657146 163658130 -2992166 + L1Md_T LINE L1 5590 6573 -12 3 1833 241 346 0 0 chrX 163658276 163658328 -2991968 + tRNA-Ala-GCY_ tRNA tRNA 19 70 -5 3 1833 814 236 22 39 chrX 163658368 163658549 -2991747 + B3 SINE B2 3 180 -36 3 1833 21 0 0 0 chrX 163658554 163658575 -2991721 + AT_rich Low_complexity Low_complexity 1 21 0 3 1833 262 299 13 0 chrX 163658588 163658665 -2991631 + ID_B1 SINE B4 90 167 -57 3 1833 291 270 12 0 chrX 163658695 163658791 -2991505 - ID4 SINE ID -50 102 6 3 1833 698 268 11 11 chrX 163658847 163659028 -2991268 + B4 SINE B4 30 210 -82 3 1833 180 0 0 0 chrX 163659030 163659050 -2991246 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 3 1833 315 0 0 0 chrX 163659114 163659149 -2991147 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1833 618 14 0 0 chrX 163659150 163659221 -2991075 + (GA)n Simple_repeat Simple_repeat 1 71 0 3 1833 388 304 60 20 chrX 163659357 163659508 -2990788 + MER45A DNA Tip100 21 177 -1 3 1833 186 231 0 0 chrX 163660031 163660096 -2990200 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 1833 503 254 102 8 chrX 163660870 163660997 -2989299 + B1F2 SINE Alu 2 140 -9 3 1833 724 331 48 3 chrX 163661065 163661377 -2988919 + L1MB5 LINE L1 5815 6140 -34 3 1833 700 260 6 19 chrX 163661791 163661948 -2988348 - RSINE1 SINE B4 -4 161 7 3 1833 1467 304 42 42 chrX 163662074 163662791 -2987505 - L1MC4 LINE L1 -7 8035 7319 3 1833 729 265 38 42 chrX 163662835 163663048 -2987248 - B3 SINE B2 -4 212 1 3 1833 232 140 0 138 chrX 163663493 163663551 -2986745 + BC1_Mm scRNA scRNA 17 66 -86 3 1833 425 233 147 22 chrX 163663836 163663972 -2986324 + B4A SINE B4 124 276 -16 3 1833 555 162 0 0 chrX 163664015 163664114 -2986182 + (CA)n Simple_repeat Simple_repeat 1 99 0 3 1833 454 235 0 70 chrX 163664181 163664309 -2985987 - RSINE1 SINE B4 0 165 47 3 1833 183 80 0 0 chrX 163666260 163666285 -2984011 + (TA)n Simple_repeat Simple_repeat 1 25 0 3 1833 324 0 0 0 chrX 163666285 163666320 -2983976 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1833 290 93 0 36 chrX 163666909 163666965 -2983331 + (TTTTG)n Simple_repeat Simple_repeat 4 57 0 4 1833 182 105 26 0 chrX 163666959 163666997 -2983299 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1833 1470 266 92 7 chrX 163667854 163668308 -2981988 + Lx8 LINE L1 6979 7471 -2 4 1833 371 306 18 36 chrX 163668420 163668532 -2981764 - PB1D10 SINE Alu -7 110 1 4 1833 279 339 24 24 chrX 163668533 163668657 -2981639 + L1MC LINE L1 5081 5204 -942 4 1833 356 306 17 43 chrX 163668732 163668848 -2981448 + PB1D10 SINE Alu 3 115 -2 4 1833 220 229 0 20 chrX 163669143 163669192 -2981104 - B1F SINE Alu -100 49 2 4 1833 572 251 79 74 chrX 163671754 163671943 -2978353 - ID_B1 SINE B4 -21 203 14 4 1833 269 349 29 52 chrX 163672422 163672558 -2977738 + MER20 DNA MER1_type 86 218 -1 4 1833 881 194 71 0 chrX 163672684 163672854 -2977442 - B3 SINE B2 -34 182 1 4 1833 688 288 53 38 chrX 163673848 163674058 -2976238 - L1MA8 LINE L1 -355 5936 5721 4 1833 3452 38 28 0 chrX 163674058 163674458 -2975838 + RLTR10A LTR ERVK 1 411 0 4 1833 688 288 53 38 chrX 163674458 163674565 -2975731 - L1MA8 LINE L1 -571 5720 5614 4 1833 2192 158 30 20 chrX 163674566 163674959 -2975337 - RMER10B LTR ERVL -1 397 1 4 1833 474 175 131 106 chrX 163675249 163675447 -2974849 - RMER17C-int LTR ERVK -364 2874 2672 4 1833 294 191 41 80 chrX 163675447 163675561 -2974735 + B1_Mm SINE Alu 45 149 -1 4 1833 2217 223 50 62 chrX 163675730 163676386 -2973910 - RLTR19-int LTR ERVK -3130 3007 2360 4 1833 180 77 0 0 chrX 163676805 163676831 -2973465 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 4 1833 1205 93 0 0 chrX 163676831 163676993 -2973303 - B2_Mm2 SINE B2 -33 162 1 4 1833 401 186 0 0 chrX 163677105 163677175 -2973121 + MTEa LTR MaLR 310 379 0 4 1833 1080 321 130 70 chrX 163677180 163677766 -2972530 + MLT-int LTR MaLR 479 1099 -636 4 1833 260 365 0 33 chrX 163677892 163678042 -2972254 + L1MC LINE L1 5672 5816 -2066 4 1833 226 188 0 20 chrX 163678055 163678100 -2972196 + B3A SINE B2 1 44 -154 4 1833 1686 71 0 0 chrX 163678100 163678324 -2971972 + MTB_Mm LTR MaLR 1 224 -183 4 1833 23 33 0 0 chrX 163678381 163678411 -2971885 + AT_rich Low_complexity Low_complexity 1 30 0 4 1833 628 142 0 9 chrX 163678443 163678550 -2971746 + L1_Mur2 LINE L1 1319 1424 -4453 4 1833 1443 277 47 48 chrX 163678544 163679045 -2971251 + Lx5 LINE L1 6576 7436 -24 4 1833 483 301 193 17 chrX 163679775 163680008 -2970288 + MLT1F2 LTR MaLR 87 360 -200 4 1833 1067 297 29 3 chrX 163680340 163680647 -2969649 - Lx8 LINE L1 -312 7161 6847 4 1833 36061 44 0 3 chrX 163684026 163689196 -2961100 + L1Md_T LINE L1 338 5589 -297 4 1833 9051 32 0 0 chrX 163689196 163690192 -2960104 + L1Md_T LINE L1 5590 6585 0 4 1833 785 319 20 27 chrX 163690351 163690644 -2959652 - B4A SINE B4 0 292 2 4 1833 260 282 126 30 chrX 163690907 163691042 -2959254 - MIRb SINE MIR -35 233 86 4 1833 750 273 53 28 chrX 163691431 163691664 -2958632 + ID_B1 SINE B4 4 242 -50 4 1833 3036 71 9 0 chrX 163692818 163693241 -2957055 - L1VL4 LINE L1 -1851 1708 1282 4 1833 7551 68 16 1 chrX 163693236 163694196 -2956100 - L1_Mus3 LINE L1 -1 6637 5664 4 1833 9904 114 2 3 chrX 163694164 163695607 -2954689 + L1_Mm LINE L1 3312 4753 -1130 4 1833 5643 86 14 4 chrX 163695601 163696700 -2953596 - L1VL4 LINE L1 -2263 1296 184 4 1833 768 283 11 0 chrX 163697115 163697295 -2953001 + B3 SINE B2 3 184 -32 4 1833 424 250 70 0 chrX 163697787 163697887 -2952409 - PB1D7 SINE Alu 0 120 14 4 1833 692 208 97 87 chrX 163697923 163698118 -2952178 - B3A SINE B2 0 198 2 4 1833 233 226 48 0 chrX 163698122 163698184 -2952112 - MER96B DNA hAT -295 122 58 4 1833 254 330 43 43 chrX 163698198 163698315 -2951981 + MLT1C LTR MaLR 320 436 -31 4 1833 219 275 41 55 chrX 163699189 163699262 -2951034 + ID4_ SINE ID 12 83 0 4 1833 696 245 144 21 chrX 163699557 163699745 -2950551 + B3 SINE B2 4 214 -2 4 1833 215 340 86 25 chrX 163699976 163700139 -2950157 - MIRb SINE MIR -47 221 49 4 1833 837 258 69 29 chrX 163700225 163700429 -2949867 + B3 SINE B2 1 212 -4 4 1833 1433 161 4 18 chrX 163701431 163701659 -2948637 + URR1B DNA MER1_type 1 225 0 4 1833 225 0 0 0 chrX 163702905 163702930 -2947366 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1833 376 301 127 14 chrX 163702946 163703222 -2947074 + Cheshire DNA MER1_type 2114 2420 0 4 1833 306 291 0 55 chrX 163703522 163703613 -2946683 - MTEa LTR MaLR -52 327 242 4 1833 539 260 10 0 chrX 163703692 163703796 -2946500 + B1F2 SINE Alu 4 108 -41 4 1833 377 328 48 8 chrX 163703796 163703818 -2946478 + B4 SINE B4 89 219 -73 4 1833 28 0 0 0 chrX 163705111 163705139 -2945157 + AT_rich Low_complexity Low_complexity 1 28 0 4 1833 342 306 153 28 chrX 163705177 163705426 -2944870 - B4 SINE B4 -11 281 2 4 1833 207 0 0 0 chrX 163705468 163705491 -2944805 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1833 3573 175 12 32 chrX 163706229 163706884 -2943412 - RLTR26 LTR ERVK 0 642 1 4 1833 4286 107 11 0 chrX 163706887 163707455 -2942841 - MERVK26-int LTR ERVK -2 6917 6344 4 1833 432 205 0 0 chrX 163707464 163707542 -2942754 - RLTR26 LTR ERVK -564 78 1 4 1833 495 48 0 0 chrX 163708489 163708551 -2941745 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 1833 222 37 0 0 chrX 163708551 163708578 -2941718 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 1833 325 284 192 16 chrX 163708581 163708774 -2941522 + L1MC3 LINE L1 6964 7190 -595 4 229 515 195 95 24 chrX 163708863 163708989 -2941307 + ORR1D1 LTR MaLR 1 135 -239 4 1834 1284 74 0 33 chrX 163708982 163709001 -2941295 - B2_Mm2 SINE B2 -16 179 166 4 1834 189 0 0 0 chrX 163709001 163709022 -2941274 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 4 1834 1284 74 0 33 chrX 163709022 163709184 -2941112 - B2_Mm2 SINE B2 -30 165 4 4 1834 204 40 0 0 chrX 163709191 163709216 -2941080 + (CCCCCA)n Simple_repeat Simple_repeat 5 29 0 4 1834 1080 198 70 21 chrX 163709221 163709330 -2940966 + ORR1D1 LTR MaLR 120 242 -132 4 1834 195 42 0 0 chrX 163709330 163709354 -2940942 + (CCTG)n Simple_repeat Simple_repeat 4 27 0 4 1834 1080 198 70 21 chrX 163709354 163709487 -2940809 + ORR1D1 LTR MaLR 243 373 -1 4 1834 964 232 123 55 chrX 163709487 163709566 -2940730 + L1MC3 LINE L1 7310 7380 -405 4 1834 2083 159 288 61 chrX 163709566 163710028 -2940268 + RMER2 LTR ERV1 1 567 0 4 1834 964 232 123 55 chrX 163710028 163710313 -2939983 + L1MC3 LINE L1 7381 7699 -86 4 1834 23 0 0 0 chrX 163710322 163710345 -2939951 + AT_rich Low_complexity Low_complexity 1 23 0 4 1834 604 224 125 18 chrX 163710350 163710518 -2939778 + B3A SINE B2 1 186 -12 4 1834 453 257 79 29 chrX 163710691 163710831 -2939465 + B1F SINE Alu 1 147 -2 4 1834 234 0 0 0 chrX 163710838 163710864 -2939432 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 1834 966 223 63 19 chrX 163711063 163711269 -2939027 - B3 SINE B2 0 216 2 4 1834 715 270 58 44 chrX 163711359 163711536 -2938760 - ID_B1 SINE B4 -15 209 24 4 1834 1937 180 100 27 chrX 163711536 163711947 -2938349 - RMER10A LTR ERVL -1 441 1 4 1834 715 270 58 44 chrX 163711947 163711974 -2938322 - ID SINE ID -201 23 2 4 1834 185 306 48 16 chrX 163712256 163712319 -2937977 + L2b LINE L2 3306 3370 -5 4 1834 211 139 0 53 chrX 163712413 163712451 -2937845 - MIR SINE MIR -220 42 7 4 1834 184 250 12 111 chrX 163712516 163712597 -2937699 - L2 LINE L2 -1421 1998 1926 4 1834 990 256 63 11 chrX 163713280 163713549 -2936747 + B4 SINE B4 4 286 -6 4 1834 378 0 0 0 chrX 163713567 163713609 -2936687 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1834 582 239 40 47 chrX 163713609 163713758 -2936538 - B1F SINE Alu 0 149 2 4 1834 473 282 10 0 chrX 163713968 163714071 -2936225 + RSINE1 SINE B4 2 105 -60 4 1834 23 0 0 0 chrX 163714167 163714190 -2936106 + AT_rich Low_complexity Low_complexity 1 23 0 4 1834 248 246 151 17 chrX 163714231 163714307 -2935989 - PB1D10 SINE Alu -41 108 26 4 1834 184 267 22 0 chrX 163715401 163715446 -2934850 + MER5B DNA MER1_type 133 178 0 4 1834 604 235 259 0 chrX 163715719 163715853 -2934443 + B3 SINE B2 5 153 -63 4 1834 416 19 19 0 chrX 163715853 163715906 -2934390 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1834 604 235 259 0 chrX 163715906 163715937 -2934359 + B3 SINE B2 154 212 -4 4 1834 268 276 128 39 chrX 163716005 163716107 -2934189 - PB1D10 SINE Alu -6 111 1 4 1834 7690 100 13 45 chrX 163716194 163717311 -2932985 - L1_Mm LINE L1 -890 4993 3908 4 1834 1207 82 0 0 chrX 163717311 163717458 -2932838 - B1_Mus1 SINE Alu 0 148 2 4 1834 7690 100 13 45 chrX 163717458 163717539 -2932757 - L1_Mm LINE L1 -1976 3907 3833 4 1834 7370 69 11 5 chrX 163717536 163718494 -2931802 + L1_Mus3 LINE L1 5669 6632 -6 4 1834 1257 61 7 0 chrX 163718804 163718951 -2931345 - B1_Mus1 SINE Alu 0 148 1 4 1834 531 0 0 0 chrX 163719657 163719716 -2930580 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1834 235 347 13 26 chrX 163720018 163720095 -2930201 + MER20 DNA MER1_type 27 102 -117 4 1834 282 56 0 0 chrX 163720292 163720328 -2929968 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1834 907 306 25 58 chrX 163720328 163720605 -2929691 - B4 SINE B4 -23 269 2 4 1834 302 293 0 0 chrX 163720606 163720681 -2929615 - MER5A1 DNA MER1_type -91 75 1 4 1834 1100 98 6 0 chrX 163720889 163721053 -2929243 + (TTC)n Simple_repeat Simple_repeat 3 167 0 4 1834 366 107 0 0 chrX 163721053 163721109 -2929187 + (TCCC)n Simple_repeat Simple_repeat 2 57 0 4 1834 621 49 0 0 chrX 163721120 163721201 -2929095 + (TCTCC)n Simple_repeat Simple_repeat 5 85 0 4 1834 1603 96 17 9 chrX 163722179 163722411 -2927885 + Lx3_Mus LINE L1 6767 7000 -9 4 1834 883 168 0 0 chrX 163722474 163722611 -2927685 + B1_Mur3 SINE Alu 1 137 -12 4 1834 1170 117 0 0 chrX 163722628 163722807 -2927489 + (GAA)n Simple_repeat Simple_repeat 2 180 0 4 1834 369 62 0 0 chrX 163722808 163722856 -2927440 + (GGA)n Simple_repeat Simple_repeat 3 50 0 4 1834 465 19 0 0 chrX 163722858 163722912 -2927384 + (TAG)n Simple_repeat Simple_repeat 3 56 0 5 1834 682 208 92 0 chrX 163722912 163723042 -2927254 + B1_Mur3 SINE Alu 1 142 -7 5 1834 597 238 189 17 chrX 163723118 163723293 -2927003 + B3 SINE B2 2 206 -10 5 1834 22 35 0 0 chrX 163723304 163723333 -2926963 + AT_rich Low_complexity Low_complexity 1 29 0 5 1834 237 159 0 0 chrX 163723698 163723742 -2926554 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1834 4105 74 22 2 chrX 163724070 163724611 -2925685 - L1_Mus1 LINE L1 0 6567 6016 5 1834 8183 88 2 5 chrX 163724612 163725684 -2924612 + L1_Mm LINE L1 4134 5204 -679 5 1834 2936 79 10 5 chrX 163725684 163726078 -2924218 - MTA_Mm LTR MaLR 0 396 1 5 1834 8183 88 2 5 chrX 163726078 163726206 -2924090 + L1_Mm LINE L1 5205 5330 -553 5 1834 861 315 90 13 chrX 163726360 163726659 -2923637 + MTE2b LTR MaLR 1 322 -57 5 1834 1242 100 0 0 chrX 163726660 163726840 -2923456 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 5 1834 387 192 0 0 chrX 163726841 163726919 -2923377 + CT-rich Low_complexity Low_complexity 1 78 0 5 1834 4226 42 0 0 chrX 163726960 163727459 -2922837 + L1Md_F2 LINE L1 6070 6568 -14 5 1834 226 351 54 103 chrX 163728366 163728550 -2921746 + MIRb SINE MIR 44 218 -50 5 1834 476 263 0 26 chrX 163728751 163728868 -2921428 + PB1D10 SINE Alu 4 117 0 5 1834 325 196 143 11 chrX 163729097 163729197 -2921099 + RMER17C LTR ERVK 78 180 -230 5 1834 387 0 0 0 chrX 163729197 163729240 -2921056 + (TTCTC)n Simple_repeat Simple_repeat 1 43 0 5 1834 1179 117 0 0 chrX 163729243 163729423 -2920873 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 5 1834 325 196 143 11 chrX 163729423 163729493 -2920803 + RMER17C LTR ERVK 181 267 -143 5 1834 1735 180 75 11 chrX 163729561 163729921 -2920375 - ORR1C2 LTR MaLR 0 384 2 5 1834 575 203 0 15 chrX 163730088 163730223 -2920073 + CT-rich Low_complexity Low_complexity 2 134 0 5 1834 7091 83 15 43 chrX 163731857 163733967 -2916329 + L1VL1 LINE L1 270 2308 -3575 5 1834 22494 101 9 1 chrX 163733977 163738191 -2912105 - L1_Mus1 LINE L1 0 6567 2319 5 1834 829 247 4 51 chrX 163738193 163738449 -2911847 + Lx9 LINE L1 7175 7418 -226 5 1834 414 0 0 0 chrX 163738478 163738524 -2911772 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1834 958 218 114 0 chrX 163738607 163738800 -2911496 - URR1A DNA MER1_type -11 215 1 5 1834 27 0 0 0 chrX 163738827 163738854 -2911442 + AT_rich Low_complexity Low_complexity 1 27 0 5 1834 835 234 33 28 chrX 163738875 163739086 -2911210 - B3 SINE B2 0 216 5 5 1834 3365 35 0 10 chrX 163739712 163740112 -2910184 + MTA_Mm LTR MaLR 1 396 0 5 1834 3742 58 21 2 chrX 163740805 163741274 -2909022 + L1_Mus1 LINE L1 6090 6567 0 5 1834 714 297 120 0 chrX 163741309 163741501 -2908795 + B4 SINE B4 3 217 -75 5 1834 318 26 0 0 chrX 163741535 163741574 -2908722 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1834 285 77 0 0 chrX 163741919 163741958 -2908338 - L1_Mm LINE L1 -818 5065 5027 5 1834 5163 50 0 6 chrX 163741959 163742597 -2907699 + L1Md_F2 LINE L1 5937 6570 -12 5 1834 762 221 0 69 chrX 163746693 163746835 -2903461 - RSINE1 SINE B4 0 165 30 5 1834 1794 192 24 19 chrX 163746835 163747207 -2903089 - ORR1D1 LTR MaLR 0 374 1 5 1834 762 221 0 69 chrX 163747207 163747239 -2903057 - RSINE1 SINE B4 -136 29 3 5 1834 420 20 0 0 chrX 163748582 163748631 -2901665 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 1834 315 0 0 0 chrX 163748631 163748665 -2901631 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1834 748 145 83 245 chrX 163749055 163749320 -2900976 + URR1A DNA MER1_type 5 226 0 5 1834 583 243 75 78 chrX 163749493 163749694 -2900602 + B4A SINE B4 5 282 -10 5 1834 387 0 0 0 chrX 163749719 163749762 -2900534 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1834 520 211 217 51 chrX 163749841 163750016 -2900280 - B3 SINE B2 -11 205 2 5 1834 265 154 30 30 chrX 163750240 163750307 -2899989 + GA-rich Low_complexity Low_complexity 3 69 0 5 1834 308 287 156 19 chrX 163750320 163750480 -2899816 - B3A SINE B2 -16 182 1 5 1834 308 262 12 0 chrX 163750737 163750821 -2899475 - Lx8 LINE L1 -258 7215 7131 5 1834 313 278 22 0 chrX 163750831 163750921 -2899375 - Lx7 LINE L1 -602 7094 7003 5 1834 738 245 207 14 chrX 163750917 163751221 -2899075 + Lx9 LINE L1 5576 5969 -1675 5 1834 2576 283 75 55 chrX 163751350 163752676 -2897620 + Lx9 LINE L1 6265 7616 -28 5 1834 1807 85 39 0 chrX 163752791 163753049 -2897247 + L1_Mus3 LINE L1 6364 6631 -7 5 1834 522 247 116 91 chrX 163753101 163753331 -2896965 - B3 SINE B2 0 216 3 5 1834 247 340 21 0 chrX 163753332 163753429 -2896867 - MER63D DNA AcHobo -690 371 273 5 1834 406 332 102 52 chrX 163753525 163754068 -2896228 + L2b LINE L2 2588 3158 -217 5 1834 275 380 94 25 chrX 163754199 163754434 -2895862 - MER46C DNA MER2_type 0 338 88 5 1834 198 222 0 0 chrX 163754498 163754534 -2895762 - MIR SINE MIR -119 143 108 5 1834 198 176 0 0 chrX 163754629 163754680 -2895616 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 5 1834 750 276 75 0 chrX 163754719 163754918 -2895378 + B3 SINE B2 1 214 -2 5 1834 1198 50 0 0 chrX 163755059 163755200 -2895096 + B1_Mm SINE Alu 2 142 -5 5 1834 936 281 31 64 chrX 163755604 163755931 -2894365 - ORR1E LTR MaLR -43 316 1 5 1834 479 353 58 39 chrX 163756195 163756507 -2893789 + MLT1J LTR MaLR 36 353 -159 5 1834 505 345 58 50 chrX 163756664 163757006 -2893290 + MLT1J-int LTR MaLR 2 346 -1041 5 1834 239 321 130 26 chrX 163757170 163757285 -2893011 + MLT1J-int LTR MaLR 449 575 -812 5 1834 637 270 9 71 chrX 163757343 163757554 -2892742 - MER3 DNA MER1_type -5 204 7 5 1834 217 278 0 36 chrX 163757605 163757661 -2892635 + B1F SINE Alu 95 148 -1 5 1834 342 0 0 0 chrX 163759198 163759236 -2891060 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1834 350 303 0 0 chrX 163759962 163760061 -2890235 + PB1D10 SINE Alu 11 109 -8 5 1834 295 292 28 0 chrX 163760085 163760157 -2890139 + ID4_ SINE ID 10 83 0 5 1834 319 228 157 14 chrX 163760854 163761001 -2889295 - Lx8 LINE L1 -16 7457 7290 5 1834 1292 293 44 5 chrX 163760996 163761407 -2888889 + Lx8 LINE L1 6483 6909 -564 5 1834 443 113 20 30 chrX 163762014 163762114 -2888182 + GA-rich Low_complexity Low_complexity 2 100 0 5 1834 1196 71 18 0 chrX 163762604 163762774 -2887522 + L1_Mus3 LINE L1 6461 6633 -5 5 1834 566 117 36 0 chrX 163762832 163762943 -2887353 + CT-rich Low_complexity Low_complexity 1 115 0 5 1834 314 267 0 65 chrX 163762943 163763035 -2887261 - RSINE1 SINE B4 -66 99 14 5 1834 285 330 48 0 chrX 163763165 163763268 -2887028 - B1F SINE Alu -13 136 29 5 1834 351 359 179 7 chrX 163763405 163763946 -2886350 - L2a LINE L2 -172 3254 2628 5 1834 206 320 30 20 chrX 163765349 163765448 -2884848 + MIRb SINE MIR 26 125 -143 5 1834 426 302 94 12 chrX 163765470 163765641 -2884655 + B3A SINE B2 4 188 -10 5 1834 302 294 115 19 chrX 163766968 163767124 -2883172 + MER31B LTR ERV1 17 187 -279 5 1834 611 245 38 100 chrX 163767134 163767374 -2882922 + MER31B LTR ERV1 140 364 -102 5 1834 25 0 0 0 chrX 163767605 163767630 -2882666 + AT_rich Low_complexity Low_complexity 1 25 0 5 1834 251 197 131 0 chrX 163767787 163767848 -2882448 - ID4 SINE ID -13 70 2 5 1834 198 0 0 0 chrX 163768575 163768597 -2881699 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1834 483 18 0 0 chrX 163768693 163768749 -2881547 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1834 484 295 73 34 chrX 163768842 163769021 -2881275 - B4A SINE B4 -105 187 2 5 1834 310 338 96 0 chrX 163769054 163769190 -2881106 - MER20 DNA MER1_type -70 149 1 5 1834 506 202 17 34 chrX 163769675 163769793 -2880503 - B3 SINE B2 0 216 101 5 1834 3259 67 0 20 chrX 163770034 163770479 -2879817 - L1Md_F2 LINE L1 -12 6570 6135 5 1834 231 337 10 0 chrX 163771142 163771240 -2879056 + L1M5 LINE L1 4548 4646 -1500 5 1834 801 222 52 42 chrX 163771707 163771919 -2878377 + B3 SINE B2 2 215 -1 5 1834 242 307 148 0 chrX 163772024 163772112 -2878184 + PB1D10 SINE Alu 16 116 -1 5 1834 372 155 0 0 chrX 163772120 163772191 -2878105 + GA-rich Low_complexity Low_complexity 2 72 0 5 1834 920 325 33 78 chrX 163772805 163773508 -2876788 - L1MA4A LINE L1 -385 5918 5216 5 1834 3148 66 2 2 chrX 163773508 163773904 -2876392 - MTA_Mm LTR MaLR 0 396 1 5 1834 706 325 44 110 chrX 163773904 163774088 -2876208 - L1MA4A LINE L1 -665 5215 5036 5 1834 835 227 85 10 chrX 163774088 163774288 -2876008 - B3 SINE B2 0 216 2 5 1834 706 325 44 110 chrX 163774288 163774610 -2875686 - L1MA4A LINE L1 -845 5035 4750 5 1834 219 69 0 0 chrX 163774694 163774723 -2875573 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 5 1834 1017 290 22 34 chrX 163774794 163775006 -2875290 - B4A SINE B4 -24 268 58 5 1834 3336 32 25 0 chrX 163775006 163775407 -2874889 - IAPLTR2a LTR ERVK 0 411 1 5 1834 1017 290 22 34 chrX 163775407 163775462 -2874834 - B4A SINE B4 -235 57 4 5 1834 1175 278 91 11 chrX 163775682 163776056 -2874240 + MTD LTR MaLR 1 404 -15 5 1834 21 0 0 0 chrX 163776074 163776095 -2874201 + AT_rich Low_complexity Low_complexity 1 21 0 5 1834 305 365 47 31 chrX 163776260 163776517 -2873779 - Lx8 LINE L1 -179 7294 7034 5 1834 371 255 9 28 chrX 163776778 163776887 -2873409 + MER53 DNA hAT 78 184 -9 5 1834 277 374 10 0 chrX 163777066 163777077 -2873219 + ID SINE ID 70 81 -143 5 1834 417 311 28 0 chrX 163777077 163777183 -2873113 + PB1D10 SINE Alu 1 109 -8 5 1834 280 138 31 0 chrX 163777228 163777293 -2873003 + GA-rich Low_complexity Low_complexity 2 68 0 5 1834 794 223 132 16 chrX 163777299 163777550 -2872746 + Lx9 LINE L1 7196 7475 -169 5 1834 414 0 0 0 chrX 163777793 163777839 -2872457 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 1834 417 70 0 0 chrX 163777839 163777895 -2872401 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 1834 240 186 102 0 chrX 163778410 163778469 -2871827 + MER57F LTR ERV1 102 166 -270 6 1834 542 277 146 32 chrX 163778554 163778800 -2871496 + MER57F LTR ERV1 157 430 -6 6 1834 437 296 41 41 chrX 163778970 163779164 -2871132 - B3A SINE B2 0 198 5 6 1834 503 380 65 46 chrX 163779314 163779791 -2870505 - MLT1H2 LTR MaLR 0 489 4 6 1834 217 323 29 48 chrX 163779860 163779899 -2870397 + B4A SINE B4 50 86 -206 6 1834 242 339 8 42 chrX 163779899 163780019 -2870277 + PB1D10 SINE Alu 1 116 -1 6 1834 700 255 35 25 chrX 163780039 163780240 -2870056 + B3 SINE B2 3 205 -11 6 1834 291 207 0 0 chrX 163780273 163780331 -2869965 - B1_Mur2 SINE Alu -3 146 89 6 1834 647 260 46 56 chrX 163780387 163780603 -2869693 - ID_B1 SINE B4 -6 218 5 6 1834 1324 205 17 94 chrX 163780764 163781168 -2869128 - ORR1D1 LTR MaLR 0 374 2 6 1834 477 34 0 0 chrX 163781246 163781305 -2868991 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 1834 328 314 98 0 chrX 163781494 163781596 -2868700 - MER81 DNA AcHobo 0 114 3 6 1834 434 279 94 44 chrX 163782384 163782564 -2867732 - B4A SINE B4 -103 189 1 6 1834 543 248 75 8 chrX 163783051 163783185 -2867111 - B1_Mur2 SINE Alu -6 143 1 6 1834 232 245 35 70 chrX 163783091 163783205 -2867091 - MT2B LTR ERVL -344 257 148 6 1834 925 218 118 23 chrX 163783274 163783480 -2866816 + B4A SINE B4 1 213 -79 6 1834 320 23 45 0 chrX 163783480 163783524 -2866772 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 6 1834 925 218 118 23 chrX 163783524 163783580 -2866716 + B4A SINE B4 214 288 -4 6 1834 414 232 148 23 chrX 163783865 163783993 -2866303 - RSINE1 SINE B4 -1 164 21 6 1834 396 0 0 0 chrX 163784919 163784963 -2865333 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1834 589 248 7 14 chrX 163785455 163785598 -2864698 - B1F SINE Alu -1 148 7 6 1834 317 24 0 23 chrX 163787465 163787508 -2862788 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1834 360 236 14 14 chrX 163787510 163787583 -2862713 - RSINE1 SINE B4 -10 155 83 6 1834 257 250 0 0 chrX 163787685 163787737 -2862559 - L1M5 LINE L1 -520 5644 5593 6 1834 215 217 217 0 chrX 163787873 163787942 -2862354 - PB1D10 SINE Alu 0 117 34 6 1834 599 279 65 37 chrX 163787978 163788194 -2862102 - ID_B1 SINE B4 -2 222 1 6 1834 709 111 34 34 chrX 163788631 163788780 -2861516 + RMER17B LTR ERVK 312 460 -498 6 1834 228 271 0 0 chrX 163788807 163788855 -2861441 + B4 SINE B4 97 144 -148 6 1834 398 287 110 60 chrX 163789082 163789282 -2861014 - MER20 DNA MER1_type -9 210 1 6 1834 260 89 71 0 chrX 163789674 163789774 -2860522 + L1Md_F3 LINE L1 6525 6584 0 6 1834 322 343 30 10 chrX 163789818 163789918 -2860378 + RSINE1 SINE B4 49 150 -15 6 1834 201 74 0 0 chrX 163789948 163789975 -2860321 + (CACG)n Simple_repeat Simple_repeat 1 27 0 6 1834 932 239 14 36 chrX 163790289 163790510 -2859786 + B4 SINE B4 3 218 -74 6 1834 419 240 21 10 chrX 163790989 163791086 -2859210 - RMER30 DNA MER1_type -11 191 94 6 1834 955 222 81 0 chrX 163791088 163791286 -2859010 - B3 SINE B2 0 216 3 6 1834 1190 68 0 0 chrX 163791311 163791459 -2858837 - B1_Mus1 SINE Alu 0 148 1 6 1834 383 191 43 43 chrX 163792257 163792350 -2857946 - L1MB5 LINE L1 -65 6109 6017 6 1834 225 315 65 0 chrX 163792343 163792451 -2857845 - L1M3 LINE L1 -458 5722 5608 6 1834 1221 101 45 0 chrX 163793021 163793200 -2857096 + B2_Mm1a SINE B2 2 188 -5 6 1834 671 300 49 23 chrX 163793457 163793720 -2856576 + B4 SINE B4 8 277 -15 6 1834 360 59 0 0 chrX 163793741 163793792 -2856504 + (CAGA)n Simple_repeat Simple_repeat 4 54 0 6 1834 895 261 66 33 chrX 163794834 163795107 -2855189 - B4A SINE B4 -5 287 6 6 1834 405 0 0 0 chrX 163795418 163795463 -2854833 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1834 558 67 0 0 chrX 163795961 163796036 -2854260 + (TC)n Simple_repeat Simple_repeat 2 76 0 6 1834 339 25 0 0 chrX 163796036 163796076 -2854220 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1834 816 269 79 16 chrX 163796127 163796380 -2853916 - B4A SINE B4 -22 270 2 6 1834 654 305 60 0 chrX 163797299 163797499 -2852797 + MTEa LTR MaLR 117 328 -51 6 1834 549 298 88 70 chrX 163797600 163797943 -2852353 - ORR1E LTR MaLR -5 354 6 6 1834 294 95 0 0 chrX 163798088 163798130 -2852166 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1834 385 349 61 0 chrX 163798130 163798262 -2852034 - RSINE1 SINE B4 -24 141 2 6 1834 315 279 16 47 chrX 163798506 163798634 -2851662 + L1MB7 LINE L1 5991 6114 -60 6 1834 3318 46 2 2 chrX 163798910 163799306 -2850990 + MTA_Mm LTR MaLR 1 396 0 6 1834 393 22 0 0 chrX 163799619 163799665 -2850631 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1834 681 36 0 0 chrX 163800966 163801050 -2849246 + (CA)n Simple_repeat Simple_repeat 2 85 0 6 1834 432 366 109 30 chrX 163801115 163801380 -2848916 - B4A SINE B4 0 292 7 6 1834 531 0 0 0 chrX 163801827 163801886 -2848410 + (TC)n Simple_repeat Simple_repeat 1 59 0 6 1834 661 264 87 11 chrX 163802639 163802823 -2847473 + B4A SINE B4 89 286 -6 6 1834 399 275 36 18 chrX 163803334 163803445 -2846851 - B1F1 SINE Alu -36 113 1 6 1834 737 285 6 0 chrX 163803445 163803523 -2846773 - ID SINE ID -143 81 3 6 1834 21 82 0 0 chrX 163804159 163804208 -2846088 + AT_rich Low_complexity Low_complexity 1 49 0 6 1834 544 250 98 0 chrX 163804311 163804443 -2845853 - B1_Mur2 SINE Alu -2 147 3 6 1834 237 65 0 0 chrX 163804462 163804493 -2845803 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1834 842 267 9 23 chrX 163804493 163804698 -2845598 - B3 SINE B2 -13 203 1 6 1834 2476 163 61 2 chrX 163805081 163805506 -2844790 + Lx6 LINE L1 6665 7114 -346 6 1834 1290 206 22 99 chrX 163805517 163805872 -2844424 - ORR1D1 LTR MaLR -41 333 6 6 1834 406 290 169 17 chrX 163805909 163806081 -2844215 + B4 SINE B4 21 218 -74 6 1834 519 299 88 9 chrX 163806417 163806691 -2843605 + Cheshire DNA MER1_type 1 302 -39 6 1834 409 318 50 43 chrX 163807730 163807891 -2842405 + RSINE1 SINE B4 4 165 0 6 1834 592 251 18 72 chrX 163808547 163808722 -2841574 + RSINE1 SINE B4 1 164 -1 6 1834 22 35 0 0 chrX 163808753 163808782 -2841514 + AT_rich Low_complexity Low_complexity 1 29 0 6 1834 1151 228 50 101 chrX 163809220 163809596 -2840700 - MTE2a LTR MaLR -14 365 9 6 1834 327 254 88 24 chrX 163810760 163810932 -2839364 + MLT1C LTR MaLR 26 197 -270 6 1834 282 283 108 23 chrX 163811261 163811383 -2838913 - L1MD1 LINE L1 -2 6240 6106 6 1834 1183 69 0 0 chrX 163811383 163811528 -2838768 + B1_Mus1 SINE Alu 2 146 -2 6 1834 417 20 0 0 chrX 163811630 163811680 -2838616 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1834 1074 266 82 17 chrX 163812139 163812495 -2837801 - MTE2a LTR MaLR 0 379 1 6 1834 1068 284 129 22 chrX 163812519 163813015 -2837281 - MER68 LTR ERVL -6 557 9 6 1834 893 246 13 86 chrX 163813076 163813391 -2836905 + B4A SINE B4 1 292 0 6 1834 319 286 12 0 chrX 163813414 163813498 -2836798 + PB1D7 SINE Alu 13 97 -23 6 1834 414 0 0 0 chrX 163813519 163813565 -2836731 + (GA)n Simple_repeat Simple_repeat 1 46 0 6 1834 485 276 58 39 chrX 163813603 163813810 -2836486 - HAL1 LINE L1 -112 2395 2185 6 1834 309 89 0 0 chrX 163813930 163813975 -2836321 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1834 195 114 0 0 chrX 163814184 163814219 -2836077 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 6 1834 470 83 0 14 chrX 163814536 163814609 -2835687 + (CA)n Simple_repeat Simple_repeat 1 72 0 6 1834 1193 89 38 32 chrX 163814741 163814927 -2835369 - B2_Mm2 SINE B2 -7 188 2 6 1834 300 291 0 28 chrX 163814965 163815071 -2835225 + BC1_Mm scRNA scRNA 1 103 -49 6 1834 329 263 39 48 chrX 163815133 163815153 -2835143 - B1F SINE Alu -46 103 31 6 1834 398 205 13 0 chrX 163815153 163815231 -2835065 - ID_B1 SINE B4 -58 166 88 6 1834 419 336 73 94 chrX 163815803 163816113 -2834183 + MLT1D LTR MaLR 3 309 -196 6 1834 812 245 75 19 chrX 163816113 163816325 -2833971 + ID_B1 SINE B4 1 224 0 6 1834 419 270 59 22 chrX 163816325 163816432 -2833864 + MLT1D LTR MaLR 293 399 -68 6 1834 370 174 93 0 chrX 163816425 163816511 -2833785 + MER58C DNA MER1_type 122 215 0 6 1834 572 337 57 16 chrX 163816843 163817255 -2833041 + MLT1F LTR MaLR 66 566 -13 6 1834 323 309 58 22 chrX 163817775 163817800 -2832496 + B1F1 SINE Alu 1 144 -5 6 1834 379 289 18 0 chrX 163817800 163817914 -2832382 + ID_B1 SINE B4 104 219 -5 6 1834 301 265 0 57 chrX 163818431 163818519 -2831777 + ID4_ SINE ID 1 83 0 6 1834 252 333 42 0 chrX 163818523 163818619 -2831677 - PB1D10 SINE Alu -13 104 5 6 1834 422 282 88 25 chrX 163818535 163818695 -2831601 - ID_B1 SINE B4 -54 170 1 6 1834 227 200 0 0 chrX 163818874 163818919 -2831377 + Lx5 LINE L1 7006 7050 0 6 1834 423 281 19 52 chrX 163819062 163819216 -2831080 + B1F2 SINE Alu 1 149 0 6 1834 254 259 78 11 chrX 163819289 163819379 -2830917 - L1M4 LINE L1 -1077 5069 4974 6 1834 222 150 0 0 chrX 163820578 163820618 -2829678 + (CTG)n Simple_repeat Simple_repeat 3 42 0 6 1834 438 260 65 46 chrX 163821063 163821325 -2828971 + Cheshire DNA MER1_type 2129 2395 -25 6 1834 248 95 13 46 chrX 163821955 163822008 -2828288 + PB1D9 SINE Alu 7 60 -88 6 1834 237 159 0 0 chrX 163822011 163822074 -2828222 + GA-rich Low_complexity Low_complexity 118 180 0 7 1834 416 247 14 0 chrX 163822308 163822413 -2827883 + PB1D10 SINE Alu 1 113 -7 7 1834 501 282 82 0 chrX 163823317 163823487 -2826809 - MER20 DNA MER1_type -35 184 1 7 1834 495 0 0 0 chrX 163823608 163823663 -2826633 + (GA)n Simple_repeat Simple_repeat 2 56 0 7 1834 285 293 121 0 chrX 163823703 163823802 -2826494 - MLT1H2 LTR MaLR -304 185 75 7 1834 672 110 109 14 chrX 163824318 163824456 -2825840 - L1Md_F2 LINE L1 -5 6577 6427 7 1834 490 280 23 59 chrX 163824479 163824699 -2825597 - MER33 DNA MER1_type -97 227 16 7 1834 574 285 126 38 chrX 163824831 163825094 -2825202 + B4A SINE B4 1 286 -6 7 1834 819 254 41 51 chrX 163825423 163825738 -2824558 + L1MB8 LINE L1 5022 5333 -813 7 1834 535 240 65 213 chrX 163825741 163825976 -2824320 + L1MC1 LINE L1 5686 5847 -486 7 1834 768 267 48 14 chrX 163825976 163826185 -2824111 + ID_B1 SINE B4 2 217 -7 7 1834 535 240 65 213 chrX 163826185 163826352 -2823944 + L1MC1 LINE L1 5848 6028 -305 7 1834 4403 62 41 0 chrX 163826356 163826916 -2823380 - L1_Mus1 LINE L1 -274 6293 5711 7 1834 2509 59 0 0 chrX 163826912 163827215 -2823081 + L1_Mus1 LINE L1 5405 5707 -176 7 1834 678 256 152 31 chrX 163827209 163827531 -2822765 + L1MB8 LINE L1 5816 6176 -2 7 1834 1257 238 70 16 chrX 163827542 163827854 -2822442 + ORR1D1 LTR MaLR 38 366 -8 7 1834 232 256 25 25 chrX 163828205 163828285 -2822011 + L1MC5 LINE L1 6728 6807 -1154 7 1834 6260 71 15 0 chrX 163828451 163829241 -2821055 - L1_Mus1 LINE L1 0 6567 5766 7 1834 216 0 0 0 chrX 163830191 163830215 -2820081 + (TCCCC)n Simple_repeat Simple_repeat 5 28 0 7 1834 477 0 0 0 chrX 163830342 163830395 -2819901 + (TG)n Simple_repeat Simple_repeat 1 53 0 7 1834 281 326 0 0 chrX 163830551 163830640 -2819656 - B4 SINE B4 -201 91 3 7 1834 413 315 9 88 chrX 163831447 163831663 -2818633 - Cheshire DNA MER1_type -2206 214 16 7 1834 551 241 0 8 chrX 163831731 163831848 -2818448 + PB1D10 SINE Alu 1 116 -1 7 1834 292 283 99 45 chrX 163832529 163832640 -2817656 + PB1D10 SINE Alu 1 117 0 7 1834 264 167 0 0 chrX 163833575 163833623 -2816673 - L1MC3 LINE L1 -223 7562 7515 7 1834 620 224 9 0 chrX 163833642 163833758 -2816538 - RSINE1 SINE B4 -41 124 8 7 1834 405 0 0 0 chrX 163833849 163833894 -2816402 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 7 1834 1225 78 6 6 chrX 163833896 163834076 -2816220 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 1834 660 252 8 22 chrX 163834076 163834210 -2816086 - ID_B1 SINE B4 -9 215 84 7 1834 394 301 18 29 chrX 163834227 163834401 -2815895 - ID_B1 SINE B4 -2 222 84 7 1834 450 94 0 0 chrX 163835750 163835814 -2814482 + (TA)n Simple_repeat Simple_repeat 2 65 0 7 1834 324 0 0 0 chrX 163835960 163835996 -2814300 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1834 702 267 125 0 chrX 163836719 163837015 -2813281 + Lx9 LINE L1 7263 7595 -49 7 1834 260 254 61 9 chrX 163837064 163837179 -2813117 + Lx8 LINE L1 7351 7471 -2 7 1834 1618 264 40 29 chrX 163837785 163838749 -2811547 - Lx5 LINE L1 -18 7032 6156 7 1834 669 308 15 19 chrX 163838768 163839114 -2811182 - Lx7 LINE L1 -190 7283 6937 7 1834 523 234 113 0 chrX 163839658 163839782 -2810514 + B1_Mur1 SINE Alu 5 142 -7 7 229 625 136 11 48 chrX 163839831 163840017 -2810279 + GA-rich Low_complexity Low_complexity 1 179 0 7 1835 1342 37 80 0 chrX 163840176 163840363 -2809933 - L1Md_F3 LINE L1 -9 6575 6374 7 1835 1702 258 34 16 chrX 163840420 163840925 -2809371 - Lx6 LINE L1 0 7460 6947 7 1835 207 0 0 0 chrX 163841357 163841380 -2808916 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 7 1835 283 295 145 16 chrX 163841784 163841970 -2808326 - HAL1 LINE L1 -745 1762 1553 7 1835 849 76 8 0 chrX 163842279 163842397 -2807899 - B1_Mm SINE Alu 0 147 29 7 1835 221 119 24 0 chrX 163842463 163842505 -2807791 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 1835 270 56 0 0 chrX 163842587 163842623 -2807673 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 7 1835 548 175 191 0 chrX 163842632 163842758 -2807538 - B1_Mur4 SINE Alu 0 150 1 7 1835 292 262 94 123 chrX 163842758 163842840 -2807456 - MT2B LTR ERVL -444 157 81 7 1835 402 284 36 66 chrX 163842786 163842952 -2807344 - B4 SINE B4 -131 161 1 7 1835 253 229 86 0 chrX 163842999 163843069 -2807227 + MADE2 DNA Mariner 5 80 0 7 1835 272 156 16 114 chrX 163843069 163843152 -2807144 - HAL1 LINE L1 -1427 1080 1005 7 1835 3083 39 8 35 chrX 163843152 163843553 -2806743 + RLTR10 LTR ERVK 1 390 0 7 1835 272 156 16 114 chrX 163843553 163843592 -2806704 - HAL1 LINE L1 -1503 1004 970 7 1835 199 259 119 40 chrX 163843730 163843854 -2806442 - MIR SINE MIR -64 198 65 7 1835 728 292 32 50 chrX 163843909 163844215 -2806081 + MLT1D LTR MaLR 1 345 -160 7 1835 231 192 19 19 chrX 163844455 163844508 -2805788 + tRNA-Ala-GCY_ tRNA tRNA 1 53 -22 7 1835 468 302 50 0 chrX 163844631 163844770 -2805526 + MLT1D LTR MaLR 357 502 -3 7 1835 653 157 32 19 chrX 163844830 163844986 -2805310 + CT-rich Low_complexity Low_complexity 3 160 0 7 1835 3137 51 8 2 chrX 163845135 163845529 -2804767 + MTA_Mm LTR MaLR 1 396 0 7 1835 592 316 68 30 chrX 163845656 163845920 -2804376 - MLT1B LTR MaLR 0 390 117 7 1835 313 404 63 11 chrX 163846089 163846279 -2804017 - HAL1 LINE L1 -2307 200 1 7 1835 9657 85 19 4 chrX 163846358 163847314 -2802982 - Lx3_Mus LINE L1 -1 7008 6051 7 1835 504 0 0 0 chrX 163847314 163847370 -2802926 + (TCCC)n Simple_repeat Simple_repeat 1 56 0 7 1835 9657 77 4 1 chrX 163847370 163848080 -2802216 - Lx3_Mus LINE L1 -959 6050 5323 7 1835 1032 187 21 105 chrX 163848092 163848426 -2801870 - L1_Mur1 LINE L1 -6668 314 9 7 1835 291 258 16 0 chrX 163848565 163848627 -2801669 - B4 SINE B4 -147 145 83 7 1835 2328 277 54 14 chrX 163848968 163849686 -2800610 - Lx8 LINE L1 -150 7323 6577 7 1835 608 259 99 43 chrX 163849686 163850028 -2800268 - Lx5 LINE L1 -550 6910 6460 7 1835 379 338 54 91 chrX 163850031 163850107 -2800189 - B4 SINE B4 -59 233 170 7 1835 2174 108 6 41 chrX 163850107 163850446 -2799850 + ORR1A2 LTR MaLR 1 327 0 7 1835 427 338 54 91 chrX 163850446 163850610 -2799686 - B4A SINE B4 -123 169 2 7 1835 445 276 103 26 chrX 163850643 163850799 -2799497 + MER5A DNA MER1_type 1 168 -21 7 1835 204 97 0 0 chrX 163851530 163851561 -2798735 + (CCAA)n Simple_repeat Simple_repeat 2 32 0 7 1835 280 378 50 20 chrX 163851595 163851695 -2798601 - PB1D10 SINE Alu -14 103 1 7 1835 465 316 17 0 chrX 163851695 163851739 -2798557 - ID SINE ID -142 82 37 7 1835 1996 172 19 22 chrX 163851739 163852107 -2798189 - ORR1B2 LTR MaLR 0 367 1 7 1835 483 210 92 10 chrX 163852282 163852477 -2797819 - RMER4B LTR ERVK 0 585 343 7 1835 300 83 0 0 chrX 163852684 163852732 -2797564 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 1835 294 29 0 0 chrX 163852749 163852784 -2797512 + (GA)n Simple_repeat Simple_repeat 1 35 0 7 1835 585 281 20 0 chrX 163852804 163852950 -2797346 - RSINE1 SINE B4 -14 151 3 7 1835 309 215 68 145 chrX 163853073 163853252 -2797044 + MTEb LTR MaLR 117 348 -31 7 1835 24 0 0 0 chrX 163853809 163853833 -2796463 + AT_rich Low_complexity Low_complexity 1 24 0 7 1835 1776 139 66 7 chrX 163853898 163854202 -2796094 - Lx LINE L1 0 6654 6333 7 1835 291 304 78 33 chrX 163854377 163854530 -2795766 + MIR SINE MIR 90 249 -13 7 1835 1030 289 105 6 chrX 163855459 163855991 -2794305 - L1MB3 LINE L1 -116 6067 5483 7 1835 829 233 53 14 chrX 163856126 163856335 -2793961 - ID_B1 SINE B4 -5 219 3 7 1835 359 310 153 14 chrX 163856524 163856668 -2793628 + B4 SINE B4 129 292 0 7 1835 2683 153 56 22 chrX 163857220 163857722 -2792574 + Lx3B LINE L1 6452 6970 -3 7 1835 633 284 129 75 chrX 163857889 163858281 -2792015 + MLT2B4 LTR ERVL 3 400 -14 7 1835 615 290 14 0 chrX 163858416 163858561 -2791735 + B3 SINE B2 67 213 -3 7 1835 21 36 0 0 chrX 163858707 163858735 -2791561 + AT_rich Low_complexity Low_complexity 1 28 0 7 1835 868 264 20 71 chrX 163859129 163859356 -2790940 + B4 SINE B4 1 216 -76 7 1835 366 42 0 0 chrX 163859356 163859404 -2790892 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 7 1835 868 264 20 71 chrX 163859404 163859429 -2790867 + B4 SINE B4 217 240 -52 7 1835 518 259 18 0 chrX 163859522 163859634 -2790662 + B3 SINE B2 1 114 -102 7 1835 31315 85 3 6 chrX 163859701 163864876 -2785420 + L1Md_F2 LINE L1 446 5586 -297 7 1835 7907 55 2 0 chrX 163864876 163865867 -2784429 + L1Md_F2 LINE L1 5587 6579 -3 7 1835 321 313 55 102 chrX 163866197 163866560 -2783736 + ORSL-2b DNA Tip100 94 439 -69 7 1835 321 275 79 62 chrX 163866561 163866739 -2783557 - L1MC4 LINE L1 -17 8025 7845 7 1835 713 301 74 19 chrX 163866767 163867079 -2783217 - Lx8 LINE L1 -2 7471 7143 7 1835 1125 300 60 11 chrX 163867064 163867445 -2782851 - Lx8 LINE L1 -846 6627 6228 7 1835 232 245 94 94 chrX 163867845 163867962 -2782334 - ORR1C2 LTR MaLR -267 117 1 7 1835 3114 102 11 2 chrX 163868134 163868584 -2781712 - Lx LINE L1 0 6654 6201 7 1835 365 207 11 0 chrX 163869247 163869334 -2780962 + (TATATG)n Simple_repeat Simple_repeat 6 93 0 7 1835 24 0 0 0 chrX 163869337 163869361 -2780935 + AT_rich Low_complexity Low_complexity 1 24 0 7 1835 369 0 0 0 chrX 163869858 163869899 -2780397 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1835 350 238 118 11 chrX 163870220 163870407 -2779889 - L1M4 LINE L1 -392 5786 5580 7 1835 2205 146 40 8 chrX 163870629 163871003 -2779293 + ORR1B1 LTR MaLR 1 386 -8 7 1835 2053 272 52 3 chrX 163871065 163871699 -2778597 + L1_Mur3 LINE L1 506 1170 -6542 7 1835 548 242 8 8 chrX 163871728 163871849 -2778447 - B1_Mur1 SINE Alu -1 148 28 7 1835 355 290 27 68 chrX 163872291 163872383 -2777913 - MER20 DNA MER1_type -2 217 130 7 1835 366 91 0 0 chrX 163872383 163872438 -2777858 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1835 355 290 27 68 chrX 163872438 163872493 -2777803 - MER20 DNA MER1_type -90 129 76 7 1835 694 322 6 17 chrX 163872501 163872678 -2777618 - B4 SINE B4 -117 175 1 8 1835 429 319 35 28 chrX 163873706 163873848 -2776448 + MLT1F LTR MaLR 1 143 -405 8 1835 338 301 17 17 chrX 163873856 163873971 -2776325 - MLT1A1 LTR MaLR 0 408 294 8 1835 1170 366 102 12 chrX 163874264 163874842 -2775454 + Arthur1B DNA Tip100 29 658 -567 8 1835 615 51 0 0 chrX 163874952 163875031 -2775265 + (CA)n Simple_repeat Simple_repeat 2 80 0 8 1835 351 0 0 0 chrX 163875031 163875069 -2775227 + (GA)n Simple_repeat Simple_repeat 2 40 0 8 1835 30256 77 19 17 chrX 163875095 163880189 -2770107 + L1Md_F2 LINE L1 487 5586 -297 8 1835 7969 51 7 0 chrX 163880189 163881178 -2769118 + L1Md_F2 LINE L1 5587 6582 0 8 1835 3088 80 14 10 chrX 163881176 163881592 -2768704 + L1_Mus1 LINE L1 6144 6561 -6 8 1835 474 18 0 0 chrX 163881594 163881649 -2768647 + (GAA)n Simple_repeat Simple_repeat 2 56 0 8 1835 1917 204 42 25 chrX 163881649 163882082 -2768214 + MTC-int LTR MaLR 819 1258 0 8 1835 785 238 49 0 chrX 163882084 163882269 -2768027 + MTC LTR MaLR 3 196 -225 8 1835 2045 254 38 72 chrX 163882269 163883116 -2767180 - Lx9 LINE L1 -955 6689 5872 8 1835 304 279 13 0 chrX 163885032 163885111 -2765185 + ID4_ SINE ID 4 83 0 8 1835 1952 139 120 14 chrX 163885135 163885484 -2764812 + ORR1B1 LTR MaLR 1 386 -8 8 1835 295 262 0 0 chrX 163885486 163885547 -2764749 - B1F SINE Alu -24 125 65 8 1835 382 360 26 0 chrX 163885550 163885664 -2764632 - B1F1 SINE Alu -30 119 3 8 1835 272 404 0 0 chrX 163885564 163885678 -2764618 - ID_B1 SINE B4 -41 183 70 8 1835 1281 212 99 37 chrX 163886587 163886939 -2763357 - ORR1D1 LTR MaLR 0 374 1 8 1835 337 42 0 0 chrX 163887126 163887174 -2763122 + L1Md_F2 LINE L1 6523 6570 -12 8 1835 263 312 25 0 chrX 163887532 163887612 -2762684 - ID2 SINE ID 0 83 2 8 1835 1112 249 93 23 chrX 163888357 163888711 -2761585 + MTEa LTR MaLR 1 379 0 8 1835 2999 102 0 0 chrX 163888827 163889276 -2761020 + L1_Mm LINE L1 4492 4940 -943 8 1835 2181 79 26 7 chrX 163889276 163889582 -2760714 + L1_Mus1 LINE L1 6255 6566 -1 8 1835 26 0 0 0 chrX 163889587 163889613 -2760683 + AT_rich Low_complexity Low_complexity 1 26 0 8 1835 309 317 35 14 chrX 163889690 163889834 -2760462 - Arthur1 DNA Tip100 -391 3556 3410 8 1835 7547 56 0 0 chrX 163889834 163891031 -2759265 - L1Md_F2 LINE L1 0 6582 5391 8 1835 2391 223 46 26 chrX 163891029 163891747 -2758549 + Lx9 LINE L1 6912 7643 -1 8 1835 889 282 23 57 chrX 163891754 163892107 -2758189 - MTC-int LTR MaLR -917 341 1 8 1835 389 187 202 0 chrX 163892107 163892219 -2758077 - MTC LTR MaLR -15 406 265 8 1835 4414 84 12 2 chrX 163892451 163893047 -2757249 - L1_Mus3 LINE L1 -12 6626 6025 8 1835 2303 43 0 4 chrX 163893451 163893730 -2756566 - L1_Mus2 LINE L1 -1 6565 6288 8 1835 267 268 88 18 chrX 163893833 163893947 -2756349 + Lx8 LINE L1 7139 7260 -213 8 1835 405 39 0 0 chrX 163894396 163894447 -2755849 + (TG)n Simple_repeat Simple_repeat 1 51 0 8 1835 753 308 10 0 chrX 163894913 163895111 -2755185 + B3 SINE B2 2 201 -15 8 1835 3955 146 45 37 chrX 163895121 163895961 -2754335 - L1_Mur2 LINE L1 -3090 2787 1941 8 1835 286 106 0 0 chrX 163895967 163896014 -2754282 + L1_Mur2 LINE L1 3174 3220 -2657 8 1835 599 157 0 24 chrX 163896011 163896135 -2754161 - L1_Mur2 LINE L1 -2984 2893 2773 8 1835 353 176 14 0 chrX 163896137 163896211 -2754085 - L1_Mur3 LINE L1 -1191 4689 4615 8 1835 30 59 0 0 chrX 163896211 163896262 -2754034 + AT_rich Low_complexity Low_complexity 1 51 0 8 1835 637 180 0 8 chrX 163896424 163896547 -2753749 + Lx4B LINE L1 6932 7053 -5 8 1835 800 269 49 8 chrX 163896571 163896837 -2753459 + L1_Mur3 LINE L1 4284 4560 -1320 8 1835 366 78 0 0 chrX 163896829 163896880 -2753416 - L1_Mur2 LINE L1 -3091 2786 2736 8 1835 475 323 18 18 chrX 163897135 163897264 -2753032 - ID_B1 SINE B4 -20 204 76 8 1835 675 290 60 0 chrX 163897264 163897447 -2752849 + ID_B1 SINE B4 3 196 -28 8 1835 329 313 141 88 chrX 163897458 163897707 -2752589 + MLT1H1 LTR MaLR 1 262 -293 8 1835 243 338 0 12 chrX 163897997 163898078 -2752218 - ID4 SINE ID -3 80 1 8 1835 2340 74 3 3 chrX 163898747 163899058 -2751238 + MTB LTR MaLR 11 321 -79 8 1835 519 266 21 21 chrX 163899082 163899224 -2751072 - RSINE1 SINE B4 -19 146 5 8 1835 214 193 18 0 chrX 163899252 163899309 -2750987 + (CCA)n Simple_repeat Simple_repeat 1 58 0 8 1835 1105 77 0 0 chrX 163899342 163899485 -2750811 - B1_Mm SINE Alu 0 147 5 8 1835 211 239 22 0 chrX 163899552 163899598 -2750698 - PB1D10 SINE Alu -5 112 66 8 1835 354 299 87 44 chrX 163899606 163899812 -2750484 + MIRb SINE MIR 54 268 0 8 1835 453 319 0 0 chrX 163900082 163900217 -2750079 + B1F SINE Alu 4 138 -11 8 1835 611 281 42 6 chrX 163901078 163901108 -2749188 - B3A SINE B2 0 198 163 8 1835 384 22 0 0 chrX 163901108 163901153 -2749143 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 1835 611 281 42 6 chrX 163901153 163901286 -2749010 - B3A SINE B2 -36 162 29 8 1835 1415 230 38 86 chrX 163901286 163901813 -2748483 + MT2B LTR ERVL 1 601 0 8 1835 221 94 0 0 chrX 163901814 163901846 -2748450 - B3 SINE B2 -184 32 1 8 1835 241 279 62 12 chrX 163901856 163901936 -2748360 + MLT1E1A LTR MaLR 201 284 -370 8 1835 564 329 83 55 chrX 163901959 163902213 -2748083 + MLT1E1A LTR MaLR 374 634 -46 8 1835 192 77 0 0 chrX 163902213 163902239 -2748057 + (T)n Simple_repeat Simple_repeat 1 26 0 8 1835 246 276 0 0 chrX 163902786 163902844 -2747452 + (TG)n Simple_repeat Simple_repeat 1 58 0 8 1835 348 282 45 9 chrX 163903032 163903143 -2747153 - Charlie5 DNA MER1_type -2509 115 1 8 1835 1737 276 108 55 chrX 163903195 163903889 -2746407 + Tigger6a DNA MER2_type 2 732 -351 8 1835 433 252 34 25 chrX 163904176 163904294 -2746002 + PB1D7 SINE Alu 1 119 -1 8 1835 295 272 131 40 chrX 163904311 163904487 -2745809 + Tigger6a DNA MER2_type 889 1080 -3 8 1835 2419 284 74 4 chrX 163904981 163905787 -2744509 + Lx8 LINE L1 6611 7473 0 8 1835 5448 57 3 3 chrX 163905798 163906482 -2743814 + L1_Mus2 LINE L1 5882 6565 -1 8 1835 1104 50 0 0 chrX 163906494 163906633 -2743663 + (GAAAA)n Simple_repeat Simple_repeat 2 140 0 8 1835 1165 55 0 14 chrX 163906637 163906785 -2743511 + B1_Mus1 SINE Alu 2 147 -1 8 1835 249 57 0 0 chrX 163906788 163906823 -2743473 + (CAAAC)n Simple_repeat Simple_repeat 1 35 0 8 1835 723 242 129 28 chrX 163907197 163907414 -2742882 + Lx8 LINE L1 6959 7197 -276 8 1835 230 176 0 19 chrX 163907465 163907517 -2742779 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 8 1835 225 295 120 5 chrX 163908827 163909011 -2741285 + L1MC5 LINE L1 7633 7837 -124 8 1835 201 74 0 0 chrX 163909238 163909265 -2741031 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 8 1835 457 175 92 0 chrX 163909265 163909385 -2740911 - Charlie7a DNA MER1_type -91 181 51 8 1835 583 385 4 32 chrX 163909763 163910015 -2740281 - MIRb SINE MIR -19 249 5 8 1835 287 336 8 32 chrX 163910020 163910143 -2740153 + MIR SINE MIR 142 261 -1 8 1835 209 167 0 45 chrX 163916092 163916136 -2734160 + A-rich Low_complexity Low_complexity 6 47 0 8 1835 216 0 0 0 chrX 163917516 163917540 -2732756 + (TC)n Simple_repeat Simple_repeat 1 24 0 8 1835 1051 317 7 18 chrX 163917604 163917890 -2732406 - B4A SINE B4 -8 284 2 8 1835 212 267 0 0 chrX 163918368 163918428 -2731868 + (TA)n Simple_repeat Simple_repeat 2 61 0 8 1835 228 227 0 0 chrX 163919024 163919068 -2731228 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 1835 520 342 118 62 chrX 163919254 163919693 -2730603 + MLT1C LTR MaLR 4 467 0 8 1835 1460 227 32 24 chrX 163920116 163920491 -2729805 + MTEa LTR MaLR 1 378 -1 8 1835 1120 270 18 43 chrX 163920596 163920927 -2729369 - MTE2a LTR MaLR -34 385 57 8 1835 1838 175 33 69 chrX 163920927 163921319 -2728977 + ORR1C1 LTR MaLR 1 378 0 8 1835 679 316 54 62 chrX 163921319 163921358 -2728938 - MTE2a LTR MaLR -363 56 18 8 1835 269 296 12 0 chrX 163921995 163922076 -2728220 - ID4 SINE ID 0 83 2 8 1835 414 0 0 0 chrX 163922575 163922621 -2727675 + (TG)n Simple_repeat Simple_repeat 2 47 0 8 1835 630 331 0 0 chrX 163922624 163922769 -2727527 - RSINE1 SINE B4 -18 147 3 8 1835 561 218 89 0 chrX 163923252 163923376 -2726920 + B1F SINE Alu 4 138 -11 8 1835 189 121 0 0 chrX 163923380 163923413 -2726883 + (CATA)n Simple_repeat Simple_repeat 2 34 0 8 1835 850 106 7 7 chrX 163923623 163923765 -2726531 + (GAAA)n Simple_repeat Simple_repeat 3 144 0 8 1835 270 295 0 39 chrX 163923954 163924032 -2726264 - ID4_ SINE ID -54 98 21 8 1835 241 161 48 0 chrX 163924040 163924102 -2726194 + (TATG)n Simple_repeat Simple_repeat 2 66 0 8 1835 613 173 35 6 chrX 163924113 163924287 -2726009 + (TATG)n Simple_repeat Simple_repeat 1 179 0 8 1835 345 309 115 74 chrX 163924336 163924605 -2725691 - B4A SINE B4 -11 281 2 8 1835 626 292 23 29 chrX 163925006 163925057 -2725239 + B3A SINE B2 3 56 -142 8 1835 2781 126 23 11 chrX 163925057 163925499 -2724797 + Lx2 LINE L1 6551 6997 0 8 1835 626 292 23 29 chrX 163925499 163925620 -2724676 + B3A SINE B2 57 174 -24 8 1835 245 357 94 16 chrX 163926635 163926763 -2723533 - MIR3 SINE MIR -25 183 46 8 1835 777 239 73 19 chrX 163927823 163928028 -2722268 - ID_B1 SINE B4 -8 216 1 8 1835 225 65 0 0 chrX 163928171 163928202 -2722094 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 1835 599 0 14 0 chrX 163928202 163928272 -2722024 + (GA)n Simple_repeat Simple_repeat 1 72 0 8 1835 342 134 0 0 chrX 163929020 163929087 -2721209 + (CA)n Simple_repeat Simple_repeat 2 68 0 8 1835 369 205 0 0 chrX 163929236 163929353 -2720943 + (TG)n Simple_repeat Simple_repeat 2 118 0 8 1835 776 246 70 101 chrX 163929374 163929672 -2720624 - B4 SINE B4 0 292 4 8 1835 430 338 36 62 chrX 163930168 163930392 -2719904 + MER20 DNA MER1_type 1 218 -1 8 1835 189 0 0 0 chrX 163930658 163930679 -2719617 + (TTG)n Simple_repeat Simple_repeat 2 22 0 9 1835 273 286 0 0 chrX 163931303 163931366 -2718930 + (CATA)n Simple_repeat Simple_repeat 4 66 0 9 1835 1963 243 157 9 chrX 163931429 163932061 -2718235 + Lx6 LINE L1 6710 7434 -26 9 1835 217 0 0 57 chrX 163932215 163932250 -2718046 + (TA)n Simple_repeat Simple_repeat 1 33 0 9 1835 886 249 81 24 chrX 163932881 163933091 -2717205 - B4 SINE B4 -68 224 3 9 1835 850 257 5 14 chrX 163933964 163934173 -2716123 - B3 SINE B2 -9 207 1 9 1835 327 299 41 10 chrX 163934182 163934280 -2716016 - PB1D10 SINE Alu -15 102 2 9 1835 1256 170 4 9 chrX 163934339 163934564 -2715732 - URR1B DNA MER1_type -1 224 1 9 1835 210 237 142 75 chrX 163935068 163935193 -2715103 + MIRm SINE MIR 2 143 -133 9 1835 313 269 96 11 chrX 163935272 163935366 -2714930 - ID_B1 SINE B4 -38 186 85 9 1835 259 327 0 91 chrX 163935404 163935525 -2714771 - PB1D7 SINE Alu -8 112 3 9 1835 438 330 46 23 chrX 163936196 163936413 -2713883 + MIRb SINE MIR 21 242 -26 9 1835 255 253 149 51 chrX 163936476 163936651 -2713645 + MIR SINE MIR 50 241 -21 9 1835 1376 216 46 27 chrX 163936851 163937218 -2713078 - ORR1D1 LTR MaLR 0 374 1 9 1835 652 306 116 26 chrX 163938223 163938491 -2711805 - B4 SINE B4 0 292 1 9 1835 1373 190 161 27 chrX 163938859 163939189 -2711107 + ORR1D1 LTR MaLR 1 374 0 9 1835 796 111 56 0 chrX 163939247 163939373 -2710923 + L1_Mus2 LINE L1 6434 6566 0 9 1835 488 93 13 0 chrX 163939402 163939477 -2710819 + (TATG)n Simple_repeat Simple_repeat 1 76 0 9 1835 624 223 86 7 chrX 163941375 163941515 -2708781 - B3 SINE B2 -5 211 61 9 1835 186 43 0 0 chrX 163941724 163941747 -2708549 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 9 1835 243 274 0 0 chrX 163941848 163941899 -2708397 - B2_Mm2 SINE B2 -144 51 1 9 1835 312 27 0 0 chrX 163942132 163942169 -2708127 + (CA)n Simple_repeat Simple_repeat 2 38 0 9 1835 817 318 79 25 chrX 163942249 163942286 -2708010 + L1MC4 LINE L1 7073 7108 -934 9 1835 369 0 0 0 chrX 163942286 163942327 -2707969 + (TA)n Simple_repeat Simple_repeat 1 41 0 9 1835 817 318 79 25 chrX 163942327 163943090 -2707206 + L1MC4 LINE L1 7109 7915 -127 9 1835 3615 46 0 0 chrX 163943527 163943961 -2706335 + L1_Mus1 LINE L1 6133 6566 -1 9 1835 508 361 43 17 chrX 163944622 163944853 -2705443 + LTR16C LTR ERVL 246 482 -7 9 1835 799 242 36 10 chrX 163945159 163945351 -2704945 - B3A SINE B2 -1 197 1 9 1835 1017 218 6 0 chrX 163946412 163946591 -2703705 - B3 SINE B2 -14 202 23 9 1835 423 315 87 22 chrX 163946709 163946894 -2703402 + MER58A DNA MER1_type 1 197 -27 9 1835 455 373 16 9 chrX 163946914 163947149 -2703147 + MIR SINE MIR 16 244 -24 9 1835 625 278 70 15 chrX 163947393 163947594 -2702702 + MER20 DNA MER1_type 7 218 -1 9 1835 438 364 69 14 chrX 163948407 163948624 -2701672 + MER77 LTR ERVL 54 282 -325 9 1835 460 373 32 12 chrX 163948650 163948902 -2701394 + MER77 LTR ERVL 344 600 -7 9 1835 242 270 0 16 chrX 163948972 163949036 -2701260 + MER58A DNA MER1_type 162 224 0 9 1835 1325 258 60 58 chrX 163950841 163950871 -2699425 - MTD LTR MaLR 0 419 384 9 1835 201 39 0 0 chrX 163950871 163950897 -2699399 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 9 1835 1325 258 60 58 chrX 163950897 163951282 -2699014 - MTD LTR MaLR -36 383 3 9 1835 554 316 22 55 chrX 163952373 163952554 -2697742 + MTEa LTR MaLR 3 177 -202 9 1835 186 43 0 0 chrX 163953029 163953052 -2697244 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9 1835 22 56 0 0 chrX 163954996 163955032 -2695264 + AT_rich Low_complexity Low_complexity 1 36 0 9 1835 306 0 0 0 chrX 163955094 163955128 -2695168 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 1835 440 252 175 52 chrX 163955130 163955400 -2694896 + L1MB5 LINE L1 5771 6087 -87 9 1835 2566 104 10 20 chrX 163955400 163955803 -2694493 + L1_Mus3 LINE L1 6234 6632 -6 9 1835 440 252 175 52 chrX 163955803 163955875 -2694421 + L1MB5 LINE L1 6088 6155 -19 9 1835 294 348 51 15 chrX 163955972 163956109 -2694187 - B1F1 SINE Alu -1 148 7 9 1835 482 301 64 19 chrX 163956886 163957042 -2693254 + ORR1E LTR MaLR 1 163 -196 9 1835 911 266 145 28 chrX 163957039 163957321 -2692975 + MTE2b LTR MaLR 53 367 -12 9 1835 1391 111 9 9 chrX 163957563 163957781 -2692515 - RLTR11B LTR ERVK -235 218 1 9 1835 463 227 115 26 chrX 163957782 163957895 -2692401 + B3 SINE B2 89 211 -5 9 1835 4916 112 40 7 chrX 163958097 163958840 -2691456 + Lx2B LINE L1 6229 6996 -4 9 1835 411 292 79 60 chrX 163959008 163959274 -2691022 + L1MB8 LINE L1 5885 6155 -23 9 1835 775 262 15 19 chrX 163959304 163959510 -2690786 + ID_B1 SINE B4 1 205 -19 9 1835 400 89 0 0 chrX 163961593 163961649 -2688647 - L1_Mus1 LINE L1 -546 6020 5965 9 1835 3912 61 50 14 chrX 163961649 163962164 -2688132 + L1_Mus1 LINE L1 6032 6565 -2 9 1835 550 293 32 130 chrX 163962280 163962353 -2687943 + B4 SINE B4 2 73 -219 9 1835 222 91 0 0 chrX 163962353 163962386 -2687910 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 9 1835 550 293 32 130 chrX 163962386 163962559 -2687737 + B4 SINE B4 74 224 -68 9 1835 231 36 0 0 chrX 163962561 163962589 -2687707 + (GA)n Simple_repeat Simple_repeat 2 29 0 9 1835 201 352 11 0 chrX 163962634 163962722 -2687574 + (CA)n Simple_repeat Simple_repeat 2 90 0 9 1835 1588 282 34 13 chrX 163962734 163963269 -2687027 + Lx8 LINE L1 6807 7352 -121 9 1835 303 71 0 0 chrX 163963393 163963435 -2686861 + (TG)n Simple_repeat Simple_repeat 1 42 0 9 1835 435 333 148 40 chrX 163965208 163965389 -2684907 + B4 SINE B4 5 208 -84 9 1835 2805 50 19 99 chrX 163965389 163965811 -2684485 + RLTR10 LTR ERVK 1 388 -2 9 1835 435 333 148 40 chrX 163965811 163965879 -2684417 + B4 SINE B4 209 281 -11 9 1835 252 0 0 0 chrX 163965885 163965913 -2684383 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 1835 272 325 34 8 chrX 163966177 163966295 -2684001 - MLT1F2 LTR MaLR -9 496 376 9 1835 1293 228 7 3 chrX 163966295 163966586 -2683710 + Lx7 LINE L1 7075 7366 -330 9 1835 445 222 64 44 chrX 163966620 163966823 -2683473 + Lx7 LINE L1 7328 7534 -162 9 1835 686 287 35 30 chrX 163966875 163967201 -2683095 + Lx8 LINE L1 4873 5238 -905 9 1835 237 65 0 0 chrX 163967201 163967232 -2683064 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 1835 319 150 0 62 chrX 163967274 163967338 -2682958 + HAL1-3A_ME LINE L1 1976 2035 -823 9 1835 424 302 12 12 chrX 163967360 163967531 -2682765 - L1_Mur2 LINE L1 -656 5221 5051 9 1835 771 297 113 35 chrX 163967522 163968174 -2682122 + Lx8 LINE L1 5213 5914 -1730 9 1835 198 0 79 26 chrX 163968445 163968483 -2681813 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 9 1835 677 253 77 0 chrX 163968705 163968899 -2681397 + Lx8 LINE L1 6232 6440 -1033 9 1835 455 298 123 18 chrX 163968901 163969120 -2681176 - MLT1F2 LTR MaLR -316 244 3 9 1835 383 123 0 0 chrX 163969148 163969205 -2681091 - MTE2b LTR MaLR 0 379 323 9 1835 808 208 77 27 chrX 163969205 163969388 -2680908 - ORR1D2 LTR MaLR 0 370 179 9 1835 522 161 0 0 chrX 163969391 163969484 -2680812 + (TA)n Simple_repeat Simple_repeat 2 94 0 9 1835 615 309 48 0 chrX 163969486 163969651 -2680645 - ORR1D2 LTR MaLR -189 181 9 9 1835 1145 234 85 54 chrX 163969659 163969975 -2680321 - MTE2a LTR MaLR -51 328 3 9 1835 289 357 35 10 chrX 163970628 163970826 -2679470 + Lx9 LINE L1 7266 7468 -176 9 1835 282 179 0 0 chrX 163970826 163970882 -2679414 + (TG)n Simple_repeat Simple_repeat 2 57 0 9 1835 21 0 0 0 chrX 163970890 163970911 -2679385 + AT_rich Low_complexity Low_complexity 1 21 0 9 1836 518 235 70 29 chrX 163971248 163971419 -2678877 - Lx5 LINE L1 -3 7047 6870 9 1836 2020 249 93 66 chrX 163971424 163971555 -2678741 + RMER19A LTR ERVK 9 140 -597 9 1836 1820 41 5 0 chrX 163971555 163971776 -2678520 + L1_Mus1 LINE L1 6331 6552 -15 9 1836 2020 249 93 66 chrX 163971776 163972354 -2677942 + RMER19A LTR ERVK 141 737 0 9 1836 1898 211 11 11 chrX 163972354 163972728 -2677568 - Lx5 LINE L1 -175 6875 6502 9 1836 710 146 0 0 chrX 163972725 163972835 -2677461 + Lx4B LINE L1 6439 6548 -510 9 1836 310 234 0 45 chrX 163972900 163972967 -2677329 - ID4_ SINE ID -13 70 7 9 1836 782 238 87 6 chrX 163974309 163974482 -2675814 + B3 SINE B2 29 215 -1 9 1836 1178 55 0 0 chrX 163974880 163975026 -2675270 - B1_Mm SINE Alu 0 147 2 9 1836 385 349 71 45 chrX 163975055 163975324 -2674972 + MLT1F LTR MaLR 158 430 -118 9 1836 639 264 145 6 chrX 163975982 163976019 -2674277 - B3 SINE B2 -3 213 166 9 1836 369 0 0 0 chrX 163976019 163976060 -2674236 + (TA)n Simple_repeat Simple_repeat 1 41 0 9 1836 639 264 145 6 chrX 163976060 163976201 -2674095 - B3 SINE B2 -51 165 11 9 1836 194 286 0 0 chrX 163976624 163976673 -2673623 - L2b LINE L2 -2 3373 3325 9 1836 3204 96 7 0 chrX 163976693 163977139 -2673157 - L1_Mus4 LINE L1 -7 6629 6181 9 1836 439 256 121 28 chrX 163977140 163977273 -2673023 + MER20 DNA MER1_type 1 146 -73 9 1836 1036 285 34 48 chrX 163977273 163977564 -2672732 + B4 SINE B4 4 290 -2 9 1836 267 341 24 0 chrX 163977751 163977833 -2672463 - Tigger7 DNA MER2_type -1 2490 2407 9 1836 230 299 0 29 chrX 163977834 163977893 -2672403 - Tigger7 DNA MER2_type -2191 300 244 9 1836 1327 248 38 49 chrX 163977893 163978044 -2672252 + ORR1D2 LTR MaLR 1 136 -234 9 1836 1411 110 4 17 chrX 163978044 163978276 -2672020 - L1_Mus3 LINE L1 -5 6633 6405 9 1836 1327 248 38 49 chrX 163978276 163978489 -2671807 + ORR1D2 LTR MaLR 137 360 -10 9 1836 798 321 8 24 chrX 163978495 163978744 -2671552 - Tigger7 DNA MER2_type -2241 250 6 9 1836 33 43 0 0 chrX 163979135 163979182 -2671114 + AT_rich Low_complexity Low_complexity 1 47 0 9 1836 704 269 79 54 chrX 163979452 163979821 -2670475 - MTEa LTR MaLR -1 378 1 9 1836 689 250 0 26 chrX 163980580 163980732 -2669564 - B1F SINE Alu -1 148 1 9 1836 608 356 29 106 chrX 163981218 163981529 -2668767 + MLT1F2 LTR MaLR 310 619 -5 9 1836 245 300 129 46 chrX 163981545 163981870 -2668426 - L1ME3A LINE L1 -118 6055 5704 9 1836 2494 83 62 42 chrX 163982145 163982548 -2667748 + IAPLTR2a LTR ERVK 1 411 0 9 1836 1149 263 43 19 chrX 163982912 163983280 -2667016 + MTE2b LTR MaLR 1 377 -2 9 1836 293 294 0 47 chrX 163983416 163983523 -2666773 - Charlie5 DNA MER1_type -2511 113 12 9 1836 252 278 123 14 chrX 163983725 163983798 -2666498 + B1F SINE Alu 2 82 -67 9 1836 371 143 0 25 chrX 163983855 163983934 -2666362 + GA-rich Low_complexity Low_complexity 4 80 0 9 1836 6156 25 0 0 chrX 163984502 163985210 -2665086 + L1Md_A LINE L1 5874 6581 -1 1 1836 276 234 36 17 chrX 163985315 163985408 -2664888 - MIRc SINE MIR -107 161 68 1 1836 1623 277 20 12 chrX 163985445 163985847 -2664449 + MTD LTR MaLR 1 405 -14 1 1836 336 318 66 10 chrX 163986489 163986686 -2663610 + L1MB4 LINE L1 5940 6147 -33 1 1836 222 37 0 0 chrX 163986692 163986719 -2663577 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1836 188 354 62 10 chrX 163988296 163988393 -2661903 + L2 LINE L2 2747 2848 -571 1 1836 539 312 118 4 chrX 163988393 163988631 -2661665 + Lx8 LINE L1 7209 7473 0 1 1836 644 307 45 0 chrX 163989085 163989264 -2661032 + B3 SINE B2 1 187 -29 1 1836 351 0 0 0 chrX 163989276 163989315 -2660981 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1836 226 290 0 42 chrX 163989640 163989712 -2660584 + MLT1A1 LTR MaLR 324 392 -16 1 1836 1534 248 30 49 chrX 163989894 163990259 -2660037 - MTE2b LTR MaLR -21 358 1 1 1836 190 288 45 0 chrX 163990366 163990432 -2659864 + MIR SINE MIR 79 147 -115 1 1836 210 329 39 97 chrX 163991226 163991381 -2658915 - MIRb SINE MIR -34 234 89 1 1836 235 287 138 0 chrX 163992222 163992309 -2657987 - L2c LINE L2 -52 3335 3237 1 1836 423 0 0 0 chrX 163992363 163992410 -2657886 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1836 489 75 0 36 chrX 163993542 163993625 -2656671 + L1Md_F2 LINE L1 6500 6579 -3 1 1836 638 175 0 0 chrX 163993781 163993878 -2656418 + B1_Mur2 SINE Alu 7 103 -46 1 1836 2350 235 74 45 chrX 163994071 163994925 -2655371 - L1_Rod LINE L1 -270 5577 4699 1 1836 7667 66 2 2 chrX 163996222 163997296 -2653000 - L1Md_F2 LINE L1 0 6582 5501 1 1836 2237 104 9 0 chrX 163997602 163997938 -2652358 - L1_Mus4 LINE L1 -284 6352 6014 1 1836 1857 98 22 7 chrX 163997965 163998242 -2652054 + L1_Mus4 LINE L1 6354 6634 -2 1 1836 257 351 36 43 chrX 163998255 163998329 -2651967 + B1F1 SINE Alu 2 72 -77 1 1836 2794 45 6 6 chrX 163998329 163998683 -2651613 - L1Md_F2 LINE L1 -2 6580 6227 1 1836 257 351 36 43 chrX 163998683 163998748 -2651548 + B1F1 SINE Alu 73 139 -10 1 1836 470 191 214 18 chrX 164000327 164000439 -2649857 - RSINE1 SINE B4 -28 137 4 1 1836 456 335 62 0 chrX 164000531 164000707 -2649589 - MER58A DNA MER1_type 0 224 38 2 1836 185 402 11 21 chrX 164001037 164001131 -2649165 + L2b LINE L2 3279 3371 -4 3 1836 23 0 0 0 chrX 164001601 164001624 -2648672 + AT_rich Low_complexity Low_complexity 1 23 0 4 1836 204 179 0 0 chrX 164002105 164002144 -2648152 + T-rich Low_complexity Low_complexity 1 39 0 5 1836 795 211 67 45 chrX 164002858 164003037 -2647259 - RMER30 DNA MER1_type -12 190 8 6 1836 2456 40 7 0 chrX 164003093 164003395 -2646901 - L1Md_F2 LINE L1 -3 6579 6276 7 1836 1374 79 11 0 chrX 164003395 164003585 -2646711 - B2_Mm1t SINE B2 0 193 2 8 1836 1093 135 74 42 chrX 164003759 164003976 -2646320 - URR1B DNA MER1_type -1 224 1 9 1836 387 0 0 0 chrX 164004507 164004550 -2645746 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1836 1886 155 88 35 chrX 164005307 164005681 -2644615 - ORR1B1 LTR MaLR 0 394 1 1 1836 5012 152 14 4 chrX 164006347 164006667 -2643629 + Lx LINE L1 4407 4732 -1151 1 1836 315 19 0 55 chrX 164006667 164006722 -2643574 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 1 1836 5012 152 14 4 chrX 164006722 164007308 -2642988 + Lx LINE L1 4733 5322 -561 1 1836 6923 83 38 0 chrX 164007327 164008877 -2641419 - L1_Mus1 LINE L1 -2 6565 4976 1 1836 6160 121 17 5 chrX 164008877 164010104 -2640192 + Lx LINE L1 5309 6548 -106 1 1836 638 0 28 38 chrX 164010365 164010471 -2639825 + (CACAC)n Simple_repeat Simple_repeat 1 105 0 1 1836 562 335 99 46 chrX 164011683 164011946 -2638350 - B4A SINE B4 -8 284 8 1 1836 930 250 0 20 chrX 164012054 164012250 -2638046 - URR1B DNA MER1_type -33 192 1 1 1836 268 344 19 84 chrX 164012250 164012278 -2638018 + CYRA11_Mm Unknown Y-chromosome 404 417 -200 1 1836 1220 286 24 30 chrX 164012618 164013158 -2637138 + L1MA4A LINE L1 5391 5927 -376 1 1836 273 355 167 0 chrX 164014255 164014393 -2635903 + MLT1J2 LTR MaLR 47 207 -241 2 1836 39 22 0 0 chrX 164014994 164015040 -2635256 + AT_rich Low_complexity Low_complexity 1 46 0 2 1836 765 92 0 0 chrX 164015142 164015262 -2635034 + (TC)n Simple_repeat Simple_repeat 1 120 0 2 1836 342 0 0 0 chrX 164015262 164015299 -2634997 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1836 504 260 62 22 chrX 164015307 164015531 -2634765 - Lx9 LINE L1 -165 7479 7247 2 1836 252 0 0 0 chrX 164015537 164015565 -2634731 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2 1836 7365 56 10 2 chrX 164015582 164016645 -2633651 + L1_Mus2 LINE L1 5494 6565 -1 2 1836 395 254 64 100 chrX 164016904 164017044 -2633252 + B3A SINE B2 1 135 -63 2 1836 636 262 0 20 chrX 164017044 164017196 -2633100 - B1_Mur1 SINE Alu 0 149 1 2 1836 507 265 0 22 chrX 164017238 164017377 -2632919 - Lx9 LINE L1 -453 7191 7056 2 1836 862 271 14 0 chrX 164017409 164017630 -2632666 - Lx9 LINE L1 -899 6745 6522 2 1836 2250 242 48 15 chrX 164017703 164018493 -2631803 - Lx9 LINE L1 -1596 6048 5202 2 1836 3043 250 27 52 chrX 164018490 164019727 -2630569 + L1_Rod LINE L1 1919 3124 -2723 2 1836 282 125 0 0 chrX 164019780 164019828 -2630468 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1836 787 291 69 22 chrX 164019828 164020102 -2630194 - B4 SINE B4 -3 289 3 3 1836 313 304 100 13 chrX 164020114 164020264 -2630032 + MER58A DNA MER1_type 51 213 -11 3 1836 240 271 250 0 chrX 164020644 164020788 -2629508 - MIRc SINE MIR -33 235 56 3 1836 1382 266 42 13 chrX 164021010 164021387 -2628909 + MT2A LTR ERVL 1 388 -145 3 1836 1930 87 34 30 chrX 164021487 164021982 -2628314 + RLTR45 LTR ERVK 31 482 0 3 1836 1281 268 31 29 chrX 164022848 164023198 -2627098 + MTEa LTR MaLR 26 376 -3 3 1836 6154 3 0 0 chrX 164024651 164025366 -2624930 + L1Md_A LINE L1 4872 5586 -297 3 1836 9042 4 0 0 chrX 164025366 164026362 -2623934 + L1Md_A LINE L1 5587 6582 0 3 1836 1077 56 35 0 chrX 164026606 164026748 -2623548 + B1_Mm SINE Alu 1 147 0 3 1836 2868 89 5 2 chrX 164026773 164027177 -2623119 + L1_Mus3 LINE L1 6233 6637 -1 3 1836 520 138 10 50 chrX 164027504 164027603 -2622693 + MTC LTR MaLR 6 100 -321 4 1836 1164 252 41 3 chrX 164027603 164027898 -2622398 - Lx6 LINE L1 -1 7459 7154 4 1836 1150 196 113 91 chrX 164027917 164028021 -2622275 + MTC LTR MaLR 106 209 -212 4 1836 2258 59 3 3 chrX 164028021 164028312 -2621984 + L1_Mus2 LINE L1 6276 6566 0 4 1836 1150 196 113 91 chrX 164028312 164028516 -2621780 + MTC LTR MaLR 210 421 0 4 1836 459 152 0 0 chrX 164028653 164028732 -2621564 + (TA)n Simple_repeat Simple_repeat 1 79 0 4 1836 248 313 38 8 chrX 164028742 164028874 -2621422 - L1MA9 LINE L1 -81 6231 6096 4 1836 361 328 82 48 chrX 164028892 164029236 -2621060 - MLT1A1 LTR MaLR -2 406 17 4 1836 608 285 95 23 chrX 164029269 164029707 -2620589 - L1M3a LINE L1 -3621 3105 2636 4 1836 296 290 30 8 chrX 164029747 164029879 -2620417 - L1M3a LINE L1 -4699 1954 1820 4 1836 398 299 67 87 chrX 164029918 164030068 -2620228 - ID_B1 SINE B4 -2 222 76 4 1836 1210 343 62 29 chrX 164030080 164030818 -2619478 - L1M3a LINE L1 -4871 1782 1020 4 1836 466 370 87 41 chrX 164030945 164031311 -2618985 - L1M3a LINE L1 -5504 1149 767 4 1836 241 260 26 64 chrX 164031902 164031980 -2618316 + Charlie24 DNA MER1_type 2360 2434 -16 4 1836 276 247 0 88 chrX 164032325 164032405 -2617891 + L2c LINE L2 3299 3371 -16 4 1836 201 39 0 0 chrX 164032874 164032900 -2617396 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 5 1836 1836 100 4 11 chrX 164033429 164033702 -2616594 - L1Md_F2 LINE L1 -13 6569 6299 5 1836 5142 112 7 11 chrX 164034094 164034907 -2615389 + L1_Mm LINE L1 4707 5516 -367 5 1836 2984 77 187 8 chrX 164034907 164035393 -2614903 + L1Md_F2 LINE L1 5995 6567 -15 5 1836 235 234 116 29 chrX 164035752 164035959 -2614337 - RMER17D LTR ERVK -374 515 291 5 1836 1134 158 21 83 chrX 164036383 164036497 -2613799 + URR1A DNA MER1_type 1 107 -119 5 1836 4887 33 0 0 chrX 164036497 164037067 -2613229 - L1Md_T LINE L1 -11 6571 6002 5 1836 1134 158 21 83 chrX 164037067 164037193 -2613103 + URR1A DNA MER1_type 108 226 0 5 1836 426 267 45 119 chrX 164037193 164037218 -2613078 - CYRA11_Mm Unknown Y-chromosome -327 290 143 5 1836 475 306 115 51 chrX 164037217 164037362 -2612934 + MTEb LTR MaLR 127 268 -111 5 1836 2086 88 64 13 chrX 164037362 164037673 -2612623 + ORR1A2 LTR MaLR 1 327 0 6 1836 475 306 115 51 chrX 164037673 164037761 -2612535 + MTEb LTR MaLR 269 374 -5 5 1836 206 108 54 0 chrX 164037937 164037974 -2612322 + T-rich Low_complexity Low_complexity 1 39 0 6 1836 545 316 16 87 chrX 164038645 164038954 -2611342 - B4A SINE B4 -1 291 5 6 1836 628 300 49 83 chrX 164039269 164039593 -2610703 - MER58B DNA MER1_type -20 321 9 6 1836 331 373 59 11 chrX 164040271 164040458 -2609838 - MLT1A0 LTR MaLR 0 374 179 6 1836 2091 219 35 19 chrX 164040522 164041006 -2609290 + RMER5 LTR ERV1 33 524 -10 6 1836 621 236 0 46 chrX 164041017 164041168 -2609128 - MLT1A0 LTR MaLR -221 144 1 6 1836 225 0 0 0 chrX 164042035 164042060 -2608236 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 6 1836 522 0 0 0 chrX 164042092 164042150 -2608146 + (GTTTG)n Simple_repeat Simple_repeat 2 59 0 6 1836 912 129 0 45 chrX 164042150 164042294 -2608002 - B1_Mus2 SINE Alu -9 138 1 6 1836 207 0 0 0 chrX 164042297 164042320 -2607976 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 1836 287 296 54 27 chrX 164042689 164042800 -2607496 + MER5B DNA MER1_type 29 142 -36 7 1836 977 248 10 5 chrX 164042843 164043050 -2607246 - B3 SINE B2 -6 210 3 7 1836 503 309 101 88 chrX 164043179 164043356 -2606940 - MER90 LTR ERV1 -112 463 299 7 1836 929 224 9 36 chrX 164043356 164043578 -2606718 + B3 SINE B2 1 216 0 7 1836 503 309 101 88 chrX 164043578 164043857 -2606439 - MER90 LTR ERV1 -277 298 1 7 1836 640 254 7 7 chrX 164044780 164044919 -2605377 - B1F SINE Alu -1 148 10 7 1836 441 0 0 0 chrX 164045447 164045496 -2604800 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1836 673 283 70 46 chrX 164046123 164046408 -2603888 - B4A SINE B4 0 292 1 7 1836 2136 179 11 0 chrX 164046649 164047084 -2603212 - Lx2B LINE L1 -765 6235 5796 7 1836 3082 200 3 25 chrX 164047080 164047756 -2602540 + Lx2B LINE L1 6232 6892 -108 7 1836 519 17 0 0 chrX 164047787 164047847 -2602449 + (GA)n Simple_repeat Simple_repeat 1 60 0 7 1836 326 390 37 0 chrX 164049077 164049241 -2601055 + L2a LINE L2 2990 3159 -267 7 1836 1140 276 24 26 chrX 164050241 164050580 -2599716 + Lx5 LINE L1 6713 7050 0 8 1836 744 273 0 36 chrX 164050795 164050962 -2599334 - RSINE1 SINE B4 0 165 5 8 1836 342 0 0 0 chrX 164051160 164051198 -2599098 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 1836 218 363 9 47 chrX 164051639 164051746 -2598550 - MIR SINE MIR 0 262 160 8 1836 219 286 185 59 chrX 164051749 164051868 -2598428 - L2a LINE L2 0 3426 3293 8 1836 468 313 142 29 chrX 164052594 164052798 -2597498 + MIRb SINE MIR 35 261 -7 8 1836 3276 35 0 20 chrX 164053199 164053607 -2596689 + L1Md_F2 LINE L1 6183 6582 0 8 1836 303 28 0 0 chrX 164054967 164055003 -2595293 + (TC)n Simple_repeat Simple_repeat 1 36 0 8 1836 1286 190 80 67 chrX 164056142 164056716 -2593580 + L1VL4 LINE L1 895 1515 -4362 8 1836 12452 189 58 101 chrX 164057502 164060197 -2590099 + Lx5 LINE L1 896 3329 -2551 8 1836 2157 44 4 7 chrX 164060197 164060470 -2589826 + L1Md_A LINE L1 6311 6582 0 9 1836 12452 190 60 119 chrX 164060470 164060946 -2589350 + Lx5 LINE L1 3330 3782 -2098 8 1836 3097 11 0 3 chrX 164060946 164061293 -2589003 + ORR1A0 LTR MaLR 1 346 0 9 1836 12452 190 60 119 chrX 164061293 164061705 -2588591 + Lx5 LINE L1 3783 4188 -1692 8 1836 378 0 0 0 chrX 164061705 164061747 -2588549 + (TA)n Simple_repeat Simple_repeat 2 43 0 9 1836 12452 190 60 119 chrX 164061747 164062805 -2587491 + Lx5 LINE L1 4189 5297 -583 8 1836 2491 29 3 0 chrX 164062803 164063119 -2587177 + L1Md_F2 LINE L1 5671 5987 -595 9 1836 1543 221 80 14 chrX 164063116 164063552 -2586744 + Lx5 LINE L1 5791 6255 -795 8 1836 1833 130 66 0 chrX 164063562 164063863 -2586433 - Lx3C LINE L1 -3 6973 6653 9 1836 733 62 0 0 chrX 164063863 164063960 -2586336 + Lx3C LINE L1 6540 6636 -340 9 1836 3990 194 20 33 chrX 164063960 164064777 -2585519 + Lx4B LINE L1 6253 7058 0 9 1836 659 264 57 0 chrX 164065785 164065925 -2584371 + B3A SINE B2 1 148 -50 9 1836 396 0 0 0 chrX 164065930 164065974 -2584322 + (CA)n Simple_repeat Simple_repeat 1 44 0 9 1836 351 0 0 0 chrX 164065974 164066012 -2584284 + (GA)n Simple_repeat Simple_repeat 2 40 0 9 1836 2308 129 3 0 chrX 164066076 164066457 -2583839 - L1_Mm LINE L1 -426 5457 5076 9 1836 1672 113 75 25 chrX 164066459 164066740 -2583556 + L1_Mus4 LINE L1 6341 6635 -1 1 1836 228 216 138 75 chrX 164066758 164066838 -2583458 + PB1D9 SINE Alu 35 119 -1 1 1836 670 342 0 10 chrX 164066862 164067054 -2583242 + B4 SINE B4 86 275 -17 1 1836 961 284 117 29 chrX 164067321 164067799 -2582497 + Charlie7 DNA MER1_type 1748 2267 -345 1 1836 783 0 0 0 chrX 164067799 164067886 -2582410 + (TTC)n Simple_repeat Simple_repeat 3 89 0 1 1836 1587 36 0 0 chrX 164067886 164068079 -2582217 + MT2_Mm LTR ERVL 301 493 0 1 1836 945 92 35 0 chrX 164068109 164068282 -2582014 + (TTC)n Simple_repeat Simple_repeat 1 179 0 1 1836 333 285 91 15 chrX 164068450 164068582 -2581714 - PB1D10 SINE Alu -1 148 7 1 1836 1104 221 5 0 chrX 164068694 164068884 -2581412 + B3 SINE B2 7 197 -19 1 1836 216 194 0 0 chrX 164068889 164068925 -2581371 + (CATATA)n Simple_repeat Simple_repeat 2 37 0 1 1836 26 0 0 0 chrX 164068933 164068959 -2581337 + AT_rich Low_complexity Low_complexity 1 26 0 1 1836 580 320 42 28 chrX 164069194 164069483 -2580813 + Tigger10 DNA Tigger 645 937 -906 1 1836 522 259 17 8 chrX 164070051 164070168 -2580128 + PB1D7 SINE Alu 1 118 -2 1 1836 198 0 0 0 chrX 164070988 164071010 -2579286 + (TTG)n Simple_repeat Simple_repeat 2 23 0 1 1836 679 300 21 60 chrX 164071420 164071704 -2578592 - B4A SINE B4 -18 274 2 1 1836 400 325 100 0 chrX 164072185 164072385 -2577911 + MER58A DNA MER1_type 4 223 -1 1 1836 429 305 9 0 chrX 164072455 164072560 -2577736 - PB1D10 SINE Alu -9 108 3 1 1836 287 317 171 0 chrX 164074101 164074224 -2576072 + LTR48 LTR ERV1 1 144 -643 1 1836 578 265 57 33 chrX 164074343 164074554 -2575742 + B3 SINE B2 1 216 0 1 1836 255 232 41 55 chrX 164075135 164075208 -2575088 + ID4_ SINE ID 1 72 -11 1 1836 183 205 0 0 chrX 164075246 164075285 -2575011 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1836 570 214 32 0 chrX 164075747 164075873 -2574423 - B3 SINE B2 -1 215 86 1 1836 301 250 0 0 chrX 164076949 164077005 -2573291 - ID4_ SINE ID -26 57 2 1 1836 608 357 5 10 chrX 164077482 164077683 -2572613 + ID_B1 SINE B4 3 202 -22 1 1836 322 299 113 0 chrX 164077654 164077751 -2572545 + B3A SINE B2 21 128 -70 1 1836 360 0 0 0 chrX 164077799 164077839 -2572457 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1836 189 0 0 0 chrX 164077839 164077859 -2572437 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 1836 198 0 0 0 chrX 164077859 164077881 -2572415 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 1 1836 249 319 116 0 chrX 164077988 164078057 -2572239 + ID4_ SINE ID 3 79 -4 1 1836 373 290 0 18 chrX 164078709 164078818 -2571478 + PB1D10 SINE Alu 1 107 -10 1 1836 243 0 0 0 chrX 164079204 164079231 -2571065 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1836 561 237 25 33 chrX 164080160 164080282 -2570014 - B1_Mur1 SINE Alu -28 121 1 1 1836 180 152 0 0 chrX 164080420 164080453 -2569843 + GA-rich Low_complexity Low_complexity 3 35 0 1 1836 895 259 20 20 chrX 164080481 164080780 -2569516 - Lx7 LINE L1 -1810 5886 5588 1 1836 234 286 0 0 chrX 164081333 164081382 -2568914 + PB1D10 SINE Alu 2 50 -67 1 1836 1462 335 8 37 chrX 164081986 164082655 -2567641 + Lx8 LINE L1 6722 7370 -103 1 1836 259 323 15 0 chrX 164082787 164082852 -2567444 + tRNA-Ala-GCG tRNA tRNA 1 66 -9 1 1836 228 67 0 0 chrX 164083739 164083769 -2566527 + (A)n Simple_repeat Simple_repeat 1 30 0 1 1836 630 170 0 0 chrX 164084347 164084453 -2565843 + URR1B DNA MER1_type 120 225 0 1 1836 656 296 69 72 chrX 164085127 164085404 -2564892 + B4A SINE B4 2 277 -15 1 1836 258 32 0 0 chrX 164085839 164085870 -2564426 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 1 1836 262 220 178 13 chrX 164085977 164086065 -2564231 - PB1D10 SINE Alu -8 112 11 1 1836 1002 181 44 40 chrX 164086169 164086394 -2563902 + URR1A DNA MER1_type 1 226 0 1 1836 987 326 22 21 chrX 164086536 164087071 -2563225 + L1MB5 LINE L1 5580 6115 -59 1 1836 3060 61 13 2 chrX 164087144 164087540 -2562756 - MTB LTR MaLR 0 400 1 1 1836 824 218 7 0 chrX 164087754 164087896 -2562400 + B1_Mur2 SINE Alu 7 149 0 1 1836 601 328 70 0 chrX 164088192 164088393 -2561903 + ID_B1 SINE B4 4 218 -6 1 1836 1525 68 9 5 chrX 164090678 164090898 -2559398 + L1_Mus4 LINE L1 6414 6634 -2 1 1836 265 385 37 37 chrX 164091498 164091743 -2558553 + RMER12 LTR ERVK 750 994 -328 1 1836 855 310 8 38 chrX 164091851 164091948 -2558348 + MLT1D LTR MaLR 249 339 -166 1 1836 961 122 196 5 chrX 164091948 164092137 -2558159 - URR1B DNA MER1_type 0 225 1 1 1836 855 310 8 38 chrX 164092137 164092304 -2557992 + MLT1D LTR MaLR 340 505 0 1 1836 387 60 0 0 chrX 164092313 164092363 -2557933 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1836 360 0 0 0 chrX 164093589 164093629 -2556667 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 1836 563 335 59 65 chrX 164093629 164093936 -2556360 - MLT1A0 LTR MaLR -41 324 20 1 1836 21 0 0 0 chrX 164094462 164094483 -2555813 + AT_rich Low_complexity Low_complexity 1 21 0 1 1836 14241 108 23 18 chrX 164094483 164097610 -2552686 - L1VL1 LINE L1 -364 3334 193 1 1836 2128 351 40 37 chrX 164097969 164099597 -2550699 - RodERV21-int LTR ERV1 -102 4889 3163 1 1836 375 226 18 62 chrX 164099633 164099746 -2550550 - RodERV21-int LTR ERV1 -3551 1440 1333 1 1836 1133 76 0 0 chrX 164099746 164099890 -2550406 + B1_Mus2 SINE Alu 2 145 -2 1 1836 1393 272 54 97 chrX 164099908 164100661 -2549635 - RodERV21-int LTR ERV1 -3645 1346 626 1 1836 22 0 0 0 chrX 164100663 164100685 -2549611 + AT_rich Low_complexity Low_complexity 1 22 0 1 1836 676 258 102 65 chrX 164100851 164101145 -2549151 - RodERV21-int LTR ERV1 -4680 311 7 1 1836 599 53 0 0 chrX 164101166 164101242 -2549054 - L1Md_F2 LINE L1 -431 6151 6076 1 1836 3056 76 23 12 chrX 164101243 164101670 -2548626 + L1Md_F2 LINE L1 6150 6581 -1 1 1836 550 317 59 65 chrX 164101949 164102068 -2548228 - Lx9 LINE L1 -3 7470 7332 1 1836 405 39 0 0 chrX 164102068 164102119 -2548177 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 229 772 290 35 60 chrX 164102119 164102533 -2547763 - Lx9 LINE L1 -187 7457 6964 1 1837 430 358 71 20 chrX 164102751 164102948 -2547348 - Charlie1b DNA MER1_type -314 209 3 1 1837 386 300 188 0 chrX 164103574 164103690 -2546606 + MER20 DNA MER1_type 30 175 -44 1 1837 239 0 0 31 chrX 164103690 164103722 -2546574 + (TAA)n Simple_repeat Simple_repeat 3 33 0 1 1837 386 300 188 0 chrX 164103722 164103765 -2546531 + MER20 DNA MER1_type 176 218 -1 1 1837 335 326 69 62 chrX 164103791 164103935 -2546361 + B4A SINE B4 2 146 -146 1 1837 270 0 0 0 chrX 164104018 164104048 -2546248 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1837 180 0 0 0 chrX 164104060 164104080 -2546216 + (GA)n Simple_repeat Simple_repeat 1 20 0 1 1837 21 0 0 0 chrX 164104080 164104101 -2546195 + AT_rich Low_complexity Low_complexity 1 21 0 1 1837 330 260 0 0 chrX 164104469 164104546 -2545750 - ID4 SINE ID -5 78 2 1 1837 551 301 59 0 chrX 164106013 164106149 -2544147 - ID_B1 SINE B4 -36 188 45 1 1837 806 25 25 25 chrX 164106288 164106410 -2543886 + (TC)n Simple_repeat Simple_repeat 2 123 0 1 1837 527 225 0 83 chrX 164106438 164106559 -2543737 - B4 SINE B4 -88 204 94 1 1837 4648 130 44 3 chrX 164106788 164107496 -2542800 + RMER19A LTR ERVK 1 737 0 1 1837 717 304 72 14 chrX 164108247 164108537 -2541759 + LTR37A LTR ERV1 105 411 -15 1 1837 1347 281 49 16 chrX 164108566 164108931 -2541365 + MTE2b LTR MaLR 1 377 -2 1 1837 7287 71 1 3 chrX 164109093 164110045 -2540251 + L1Md_F2 LINE L1 5633 6582 0 1 1837 1169 270 11 18 chrX 164112591 164112877 -2537419 - B4 SINE B4 -8 284 1 1 1837 540 81 0 0 chrX 164113003 164113077 -2537219 + (TCC)n Simple_repeat Simple_repeat 2 75 0 1 1837 330 258 90 0 chrX 164113681 164113770 -2536526 + PB1D7 SINE Alu 1 97 -23 1 1837 423 289 0 0 chrX 164113692 164113796 -2536500 + ID_B1 SINE B4 98 201 -23 1 1837 393 303 25 0 chrX 164113862 164113984 -2536312 + RMER30 DNA MER1_type 2 126 -76 1 1837 210 105 0 0 chrX 164114001 164114039 -2536257 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 1 1837 1206 55 0 0 chrX 164114039 164114185 -2536111 - B1_Mm SINE Alu 0 147 2 1 1837 3183 156 2 19 chrX 164114208 164114745 -2535551 + Lx2 LINE L1 6470 6997 0 1 1837 316 231 26 0 chrX 164115407 164115485 -2534811 - PB1D10 SINE Alu -4 113 34 1 1837 1262 271 64 23 chrX 164115497 164115969 -2534327 - L1MD3 LINE L1 -89 7906 7416 1 1837 324 0 0 0 chrX 164116095 164116131 -2534165 + (TC)n Simple_repeat Simple_repeat 1 36 0 1 1837 694 203 41 150 chrX 164116159 164116379 -2533917 - B3 SINE B2 -12 204 9 1 1837 383 267 58 35 chrX 164116383 164116554 -2533742 - L1MD3 LINE L1 -921 7074 6900 1 1837 469 290 84 72 chrX 164116566 164116733 -2533563 - ID_B1 SINE B4 -44 248 80 1 1837 234 297 0 0 chrX 164116772 164116846 -2533450 - L1MD3 LINE L1 -1166 6829 6756 1 1837 992 153 117 15 chrX 164116850 164117055 -2533241 + URR1A DNA MER1_type 1 226 0 1 1837 307 318 27 36 chrX 164117452 164117563 -2532733 + MLT1A0 LTR MaLR 4 113 -252 1 1837 345 237 179 21 chrX 164117593 164117688 -2532608 + PB1D7 SINE Alu 1 110 -10 1 1837 243 300 86 0 chrX 164117894 164117964 -2532332 - ID4_ SINE ID -6 77 2 1 1837 360 0 0 0 chrX 164119126 164119166 -2531130 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1837 182 315 60 69 chrX 164119730 164119846 -2530450 - MIRc SINE MIR -92 176 62 1 1837 237 132 0 0 chrX 164120793 164120831 -2529465 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1837 614 148 28 0 chrX 164120917 164121025 -2529271 - B1_Mur4 SINE Alu -6 144 34 1 1837 3174 54 0 3 chrX 164121213 164121604 -2528692 - L1_Mm LINE L1 -45 5838 5449 1 1837 3153 48 15 0 chrX 164121604 164122003 -2528293 + L1Md_F3 LINE L1 6180 6584 0 1 1837 516 32 0 0 chrX 164122124 164122186 -2528110 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 1837 311 227 26 13 chrX 164122483 164122559 -2527737 + MLT1K LTR MaLR 509 585 -10 2 1837 358 273 2 36 chrX 164122725 164122850 -2527446 - PB1D7 SINE Alu -4 146 23 2 1837 21 57 0 0 chrX 164123044 164123079 -2527217 + AT_rich Low_complexity Low_complexity 1 35 0 2 1837 198 0 0 0 chrX 164123840 164123862 -2526434 + (CCCTAA)n Simple_repeat Simple_repeat 6 27 0 2 1837 381 102 0 0 chrX 164124138 164124197 -2526099 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1837 609 115 0 0 chrX 164124830 164124926 -2525370 + (TG)n Simple_repeat Simple_repeat 1 96 0 2 1837 791 279 75 30 chrX 164124936 164125202 -2525094 - B4A SINE B4 -14 278 1 2 1837 818 166 112 6 chrX 164125384 164125426 -2524870 + URR1B DNA MER1_type 36 79 -146 2 1837 432 0 0 0 chrX 164125426 164125474 -2524822 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1837 818 166 112 6 chrX 164125474 164125601 -2524695 + URR1B DNA MER1_type 80 222 -3 2 1837 269 76 29 29 chrX 164125637 164125705 -2524591 + (CAAA)n Simple_repeat Simple_repeat 2 69 0 2 1837 336 143 0 0 chrX 164126790 164126846 -2523450 + (T)n Simple_repeat Simple_repeat 1 56 0 2 1837 430 249 0 19 chrX 164126846 164126954 -2523342 + B1F SINE Alu 44 149 0 2 1837 1165 68 0 0 chrX 164127815 164127962 -2522334 - B1_Mm SINE Alu 0 147 1 2 1837 678 263 25 87 chrX 164128094 164128290 -2522006 - B3A SINE B2 0 198 15 2 1837 182 37 0 36 chrX 164128373 164128401 -2521895 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 2 1837 644 203 20 34 chrX 164128403 164128551 -2521745 - B1F SINE Alu -1 148 3 2 1837 201 167 0 0 chrX 164129198 164129234 -2521062 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2 1837 254 239 29 15 chrX 164129778 164129846 -2520450 - ID4_ SINE ID -13 70 2 2 1837 348 24 0 0 chrX 164129916 164129957 -2520339 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1837 282 29 0 0 chrX 164129957 164129991 -2520305 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1837 743 269 11 21 chrX 164129995 164130185 -2520111 - B3 SINE B2 -28 188 1 2 1837 247 128 0 0 chrX 164130463 164130502 -2519794 + L1MC LINE L1 5713 5751 -2131 2 1837 4887 62 0 34 chrX 164130587 164131255 -2519041 - L1Md_F2 LINE L1 -13 6569 5925 2 1837 255 125 0 0 chrX 164131299 164131339 -2518957 + (TCTA)n Simple_repeat Simple_repeat 1 40 0 2 1837 318 228 138 12 chrX 164131689 164131769 -2518527 - B3 SINE B2 -2 214 125 2 1837 936 221 35 85 chrX 164131776 164132226 -2518070 + RMER10B LTR ERVL 5 398 0 2 1837 568 228 0 50 chrX 164132236 164132356 -2517940 - B3 SINE B2 -101 115 2 2 1837 242 254 83 14 chrX 164132621 164132693 -2517603 + L1MC5 LINE L1 6766 6842 -1200 2 1837 262 270 0 43 chrX 164132853 164132946 -2517350 + CT-rich Low_complexity Low_complexity 2 90 0 2 1837 392 324 42 45 chrX 164132960 164133225 -2517071 + L1MC5 LINE L1 7050 7313 -648 2 1837 252 279 43 35 chrX 164133625 164133766 -2516530 + L1MC5 LINE L1 7709 7850 -111 2 1837 745 258 77 5 chrX 164133923 164134118 -2516178 + B3 SINE B2 4 212 -4 2 1837 323 96 19 0 chrX 164134289 164134341 -2515955 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 1837 206 216 14 0 chrX 164134390 164134464 -2515832 + (TA)n Simple_repeat Simple_repeat 1 75 0 2 1837 370 280 10 0 chrX 164134582 164134682 -2515614 + L1ME5 LINE L1 6093 6193 -1 2 1837 297 128 0 0 chrX 164134992 164135039 -2515257 + (TTC)n Simple_repeat Simple_repeat 2 48 0 2 1837 200 61 0 57 chrX 164135474 164135509 -2514787 + (TTTTC)n Simple_repeat Simple_repeat 4 36 0 2 1837 271 329 14 0 chrX 164135520 164135590 -2514706 - ID4 SINE ID -1 82 12 2 1837 609 147 0 0 chrX 164136420 164136529 -2513767 + (GAAA)n Simple_repeat Simple_repeat 4 112 0 2 1837 369 250 87 0 chrX 164137144 164137236 -2513060 + B1_Mur2 SINE Alu 24 123 -26 2 1837 630 312 25 0 chrX 164137534 164137736 -2512560 + B3 SINE B2 5 211 -5 2 1837 404 226 42 21 chrX 164137785 164137880 -2512416 + PB1D10 SINE Alu 21 117 0 2 1837 237 277 19 38 chrX 164137900 164138009 -2512287 + ID4_ SINE ID 10 116 -36 2 1837 2076 162 5 41 chrX 164138234 164138647 -2511649 + RMER10B LTR ERVL 1 398 0 2 1837 273 335 131 12 chrX 164138833 164138993 -2511303 + MIR SINE MIR 5 183 -79 2 1837 1100 270 93 28 chrX 164139917 164140272 -2510024 - MTEb LTR MaLR -1 378 1 2 1837 789 282 37 54 chrX 164140761 164141057 -2509239 + B4A SINE B4 2 292 0 2 1837 22 0 0 0 chrX 164141837 164141859 -2508437 + AT_rich Low_complexity Low_complexity 1 22 0 2 1837 435 316 103 26 chrX 164141979 164142174 -2508122 + ID_B1 SINE B4 4 213 -11 2 1837 4441 162 36 38 chrX 164142655 164143086 -2507210 + RMER17B LTR ERVK 1 416 -542 2 1837 449 17 17 0 chrX 164143086 164143144 -2507152 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 1837 369 0 0 0 chrX 164143144 164143184 -2507112 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1837 4441 162 36 38 chrX 164143184 164143590 -2506706 + RMER17B LTR ERVK 417 835 -123 2 1837 560 345 57 19 chrX 164143742 164144005 -2506291 - Charlie4 DNA MER1_type -1668 293 21 2 1837 246 382 9 9 chrX 164144105 164144216 -2506080 - MIR3 SINE MIR -40 168 58 2 1837 315 324 28 9 chrX 164144770 164144876 -2505420 + MER5A1 DNA MER1_type 13 120 -46 2 1837 646 345 83 72 chrX 164144998 164145501 -2504795 + MLT1F2 LTR MaLR 7 515 -45 2 1837 1124 309 19 11 chrX 164145521 164145883 -2504413 + MTE2b LTR MaLR 1 379 0 2 1837 274 186 111 28 chrX 164145886 164145958 -2504338 - MTE2a LTR MaLR -22 357 280 2 1837 230 189 0 19 chrX 164146050 164146104 -2504192 + A-rich Low_complexity Low_complexity 2 54 0 2 1837 532 267 320 25 chrX 164146275 164146557 -2503739 + MTE2b LTR MaLR 5 369 -10 2 1837 913 285 38 15 chrX 164147800 164148067 -2502229 + B4 SINE B4 2 274 -18 2 1837 342 0 0 0 chrX 164148174 164148212 -2502084 + (TC)n Simple_repeat Simple_repeat 1 38 0 2 1837 396 0 0 0 chrX 164148212 164148255 -2502041 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1837 305 346 15 15 chrX 164149493 164149625 -2500671 + L1M2 LINE L1 5255 5386 -757 2 1837 524 333 15 8 chrX 164150175 164150308 -2499988 + RSINE1 SINE B4 5 138 -27 2 1837 468 294 44 10 chrX 164150480 164150683 -2499613 + L1MB7 LINE L1 5754 5963 -221 2 1837 1284 307 123 19 chrX 164150857 164151498 -2498798 + Lx8 LINE L1 6011 6718 -755 2 1837 746 322 39 25 chrX 164151573 164151856 -2498440 - B4A SINE B4 -3 289 3 2 1837 238 352 56 35 chrX 164152069 164152213 -2498083 + RLTR31_Mm LTR ERVK 320 466 -95 2 1837 467 315 47 0 chrX 164153358 164153507 -2496789 + RMER15 LTR ERVL 403 558 -17 2 1837 207 114 29 0 chrX 164153559 164153594 -2496702 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2 1837 977 230 42 0 chrX 164153605 164153818 -2496478 + MER58B DNA MER1_type 105 326 -15 2 1837 291 359 0 42 chrX 164155565 164155661 -2494635 + MER58A DNA MER1_type 2 93 -131 2 1837 639 276 53 45 chrX 164155998 164156245 -2494051 + MER45B DNA Tip100 424 672 -368 2 1837 330 320 31 0 chrX 164156250 164156347 -2493949 + PB1D10 SINE Alu 19 115 -2 2 1837 767 265 108 72 chrX 164156365 164156642 -2493654 + B4 SINE B4 6 292 0 2 1837 224 240 13 39 chrX 164156665 164156743 -2493553 + A-rich Low_complexity Low_complexity 6 81 0 2 1837 315 335 157 28 chrX 164156750 164157075 -2493221 + MER45B DNA Tip100 667 1033 -7 2 1837 190 160 0 39 chrX 164158507 164158559 -2491737 + GA-rich Low_complexity Low_complexity 3 52 0 2 1837 999 292 31 51 chrX 164158744 164158963 -2491333 - B4A SINE B4 -6 286 65 2 1837 3416 33 2 0 chrX 164158963 164159358 -2490938 + MTA_Mm LTR MaLR 1 396 0 2 1837 999 292 31 51 chrX 164159358 164159430 -2490866 - B4A SINE B4 -228 64 1 2 1837 343 274 93 0 chrX 164162221 164162328 -2487968 - B1F1 SINE Alu -3 124 1 2 1837 234 254 75 0 chrX 164162380 164162447 -2487849 + tRNA-Ala-GCA tRNA tRNA 1 72 -3 2 1837 756 247 74 6 chrX 164162828 164162991 -2487305 - B3 SINE B2 -41 175 2 2 1837 1218 55 0 0 chrX 164163706 164163852 -2486444 + B1_Mm SINE Alu 2 147 0 2 1837 429 20 0 0 chrX 164163866 164163916 -2486380 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 1837 272 248 6 159 chrX 164165087 164165229 -2485067 + L1MB4 LINE L1 5554 5672 -508 2 1837 444 51 0 0 chrX 164165229 164165288 -2485008 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1837 268 248 6 159 chrX 164165288 164165308 -2484988 + L1MB4 LINE L1 5673 5691 -489 2 1837 645 314 38 3 chrX 164165357 164165645 -2484651 + L1MB4 LINE L1 5680 5977 -203 2 1837 1650 244 62 8 chrX 164165898 164166283 -2484013 + MTD LTR MaLR 1 406 -13 2 1837 593 278 22 59 chrX 164166662 164166884 -2483412 + Lx8 LINE L1 7258 7471 -2 2 1837 26 0 0 0 chrX 164166884 164166910 -2483386 + AT_rich Low_complexity Low_complexity 1 26 0 2 1837 920 84 8 0 chrX 164169659 164169790 -2480506 + L1_Mus1 LINE L1 6427 6558 -9 2 1837 233 29 29 0 chrX 164169793 164169827 -2480469 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1837 579 275 0 0 chrX 164169830 164169961 -2480335 - B1F SINE Alu -16 133 3 2 1837 191 354 20 30 chrX 164170534 164170633 -2479663 + MIR SINE MIR 43 140 -122 2 1837 207 100 0 0 chrX 164171115 164171145 -2479151 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1837 493 252 29 51 chrX 164171510 164171648 -2478648 + MER20 DNA MER1_type 2 136 -83 2 1837 254 326 95 32 chrX 164171661 164171756 -2478540 + B3 SINE B2 3 103 -113 2 1837 579 365 36 7 chrX 164172582 164172858 -2477438 + RMER15 LTR ERVL 276 559 -16 2 1837 342 232 178 20 chrX 164173875 164173976 -2476320 - PB1D7 SINE Alu -3 117 1 2 1837 738 272 20 25 chrX 164174256 164174456 -2475840 + ID_B1 SINE B4 3 201 -23 2 1837 467 261 143 73 chrX 164174655 164174928 -2475368 + B4A SINE B4 1 292 0 2 1837 213 211 0 0 chrX 164174951 164174989 -2475307 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1837 969 310 81 28 chrX 164175234 164175564 -2474732 + MTD LTR MaLR 41 383 -36 2 1837 267 31 0 0 chrX 164175564 164175596 -2474700 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 3 1837 969 310 81 28 chrX 164175596 164175623 -2474673 + MTD LTR MaLR 384 416 -3 2 1837 927 222 34 5 chrX 164175788 164175992 -2474304 + B3 SINE B2 2 211 -5 3 1837 324 0 0 0 chrX 164176698 164176734 -2473562 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1837 21 0 0 0 chrX 164176766 164176787 -2473509 + AT_rich Low_complexity Low_complexity 1 21 0 3 1837 234 292 45 30 chrX 164177193 164177327 -2472969 - L1MC4 LINE L1 -287 7755 7620 3 1837 1225 276 38 8 chrX 164177672 164178037 -2472259 + MTE2b LTR MaLR 3 378 -1 3 1837 1984 244 81 32 chrX 164178808 164179293 -2471003 + Lx8 LINE L1 6843 7336 -137 3 1837 767 40 0 10 chrX 164179293 164179393 -2470903 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 3 1837 1984 244 81 32 chrX 164179393 164179499 -2470797 + Lx8 LINE L1 7337 7463 -10 3 1837 384 22 0 0 chrX 164180169 164180214 -2470082 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1837 24 0 0 0 chrX 164180571 164180595 -2469701 + AT_rich Low_complexity Low_complexity 1 24 0 3 1837 205 246 17 17 chrX 164180694 164180752 -2469544 + (CATA)n Simple_repeat Simple_repeat 1 58 0 3 1837 4997 96 12 48 chrX 164180830 164180989 -2469307 + L1_Mus2 LINE L1 5144 5290 -593 3 1837 1172 61 0 0 chrX 164180989 164181136 -2469160 + B1_Mus2 SINE Alu 1 147 0 3 1837 7506 71 13 13 chrX 164181136 164182423 -2467873 + L1_Mus2 LINE L1 5291 6566 0 3 1837 1480 83 34 0 chrX 164184048 164184253 -2466043 - L1_Mus1 LINE L1 0 6567 6356 3 1837 879 213 90 0 chrX 164184433 164184621 -2465675 + B3 SINE B2 2 206 -10 3 1837 292 291 100 2 chrX 164185668 164185812 -2464484 - MER5A1 DNA MER1_type -28 161 2 3 1837 404 349 34 68 chrX 164186589 164186795 -2463501 + MER58A DNA MER1_type 1 199 -25 3 1837 510 317 14 0 chrX 164187642 164187787 -2462509 - B1F SINE Alu -1 148 2 3 1837 5202 15 0 0 chrX 164187912 164188511 -2461785 + L1Md_T LINE L1 4988 5586 -297 3 1837 8888 10 0 0 chrX 164188511 164189507 -2460789 + L1Md_T LINE L1 5587 6582 0 3 1837 405 0 0 0 chrX 164189559 164189604 -2460692 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 1837 990 331 21 11 chrX 164190262 164190549 -2459747 - B4A SINE B4 -2 290 1 3 1837 624 273 86 21 chrX 164190806 164191049 -2459247 + MER33 DNA MER1_type 7 265 -59 3 1837 275 347 21 0 chrX 164191054 164191149 -2459147 + ID_B1 SINE B4 80 176 -48 3 1837 358 307 50 0 chrX 164191064 164191165 -2459131 + PB1D7 SINE Alu 9 114 -6 3 1837 3515 77 23 0 chrX 164191610 164192080 -2458216 - L1_Mus1 LINE L1 0 6567 6087 3 1837 874 55 0 0 chrX 164192080 164192189 -2458107 + L1Md_F2 LINE L1 5966 6074 -508 3 1837 406 313 69 10 chrX 164192614 164192817 -2457479 - ID_B1 SINE B4 -9 215 1 3 1837 368 371 32 8 chrX 164192866 164192991 -2457305 - B1F2 SINE Alu -20 129 2 3 1837 33 0 0 0 chrX 164193465 164193498 -2456798 + AT_rich Low_complexity Low_complexity 1 33 0 3 1837 296 281 58 51 chrX 164193502 164193674 -2456622 + RLTR13D3 LTR ERVK 1 175 -848 3 1837 21 57 0 0 chrX 164193912 164193947 -2456349 + AT_rich Low_complexity Low_complexity 1 35 0 3 1837 259 262 117 84 chrX 164194145 164194299 -2455997 + RLTR13D3 LTR ERVK 650 808 0 3 1837 280 218 0 0 chrX 164194763 164194818 -2455478 - ID_B1 SINE B4 -3 221 167 3 1837 385 274 60 26 chrX 164194808 164194924 -2455372 - B1F2 SINE Alu -22 127 8 3 1837 885 262 11 5 chrX 164194823 164195011 -2455285 - ID_B1 SINE B4 -34 190 2 3 1837 261 0 0 0 chrX 164195727 164195756 -2454540 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1837 360 0 0 0 chrX 164196112 164196152 -2454144 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1837 360 200 0 0 chrX 164196152 164196227 -2454069 + (TATG)n Simple_repeat Simple_repeat 2 76 0 3 1837 31 0 0 0 chrX 164196355 164196386 -2453910 + AT_rich Low_complexity Low_complexity 1 31 0 3 1837 476 128 35 0 chrX 164196719 164196805 -2453491 - MTA_Mm LTR MaLR 0 400 312 3 1837 336 49 0 0 chrX 164196805 164196846 -2453450 - L1_Mus2 LINE L1 -254 6312 6272 3 1837 1591 104 0 0 chrX 164196846 164197068 -2453228 + L1Md_F2 LINE L1 6349 6570 -12 3 1837 1140 58 0 0 chrX 164197083 164197221 -2453075 + B1_Mm SINE Alu 1 138 -9 3 1837 1130 85 6 0 chrX 164197221 164197385 -2452911 + (GAA)n Simple_repeat Simple_repeat 2 166 0 3 1837 2345 59 68 0 chrX 164197396 164197719 -2452577 - MTA_Mm LTR MaLR -51 345 1 3 1837 725 314 18 39 chrX 164198257 164198486 -2451810 + B4A SINE B4 1 224 -68 3 1837 201 226 0 0 chrX 164198636 164198689 -2451607 + (CATG)n Simple_repeat Simple_repeat 2 54 0 3 1837 254 330 115 67 chrX 164200537 164200641 -2449655 - PB1D7 SINE Alu -2 118 10 3 1837 743 213 98 5 chrX 164201004 164201188 -2449108 - URR1A DNA MER1_type -9 217 17 3 1837 486 0 0 0 chrX 164201194 164201248 -2449048 + (GA)n Simple_repeat Simple_repeat 2 55 0 3 1837 230 279 0 0 chrX 164201893 164201954 -2448342 - RMER15 LTR ERVL -105 470 410 3 1837 983 231 39 45 chrX 164202016 164202296 -2448000 - Lx8 LINE L1 -265 7208 6943 3 1837 321 26 0 0 chrX 164202399 164202437 -2447859 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 3 1837 568 294 88 39 chrX 164202440 164202582 -2447714 + B3 SINE B2 2 160 -56 3 1837 486 33 0 0 chrX 164202582 164202642 -2447654 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 1837 537 16 0 0 chrX 164202643 164202705 -2447591 + (GA)n Simple_repeat Simple_repeat 2 63 0 3 1837 568 294 88 39 chrX 164202705 164202765 -2447531 + B3 SINE B2 161 216 0 3 1837 243 0 0 0 chrX 164203684 164203711 -2446585 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1837 432 0 0 0 chrX 164204849 164204897 -2445399 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1837 275 274 68 0 chrX 164205338 164205411 -2444885 + RSINE1 SINE B4 59 136 -29 3 1837 275 303 26 52 chrX 164205979 164206094 -2444202 + YREP_Mm Unknown Unknown 185 296 -1516 3 1837 865 294 5 0 chrX 164206004 164206191 -2444105 - ID_B1 SINE B4 -33 191 4 3 1837 302 291 9 64 chrX 164206336 164206446 -2443850 + PB1D10 SINE Alu 6 109 -8 3 1837 326 326 21 10 chrX 164206605 164206701 -2443595 - RSINE1 SINE B4 -67 98 2 3 1837 320 335 52 23 chrX 164207559 164207733 -2442563 - MER68 LTR ERVL -241 322 144 3 1837 306 0 0 0 chrX 164208473 164208507 -2441789 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1837 22 0 0 0 chrX 164208869 164208891 -2441405 + AT_rich Low_complexity Low_complexity 1 22 0 3 1837 296 233 75 43 chrX 164209112 164209206 -2441090 - MER63D DNA AcHobo -652 409 313 3 1837 226 222 19 0 chrX 164210065 164210119 -2440177 - L1MC4 LINE L1 -32 8010 7956 3 1837 184 346 19 37 chrX 164210467 164210575 -2439721 + L3 LINE CR1 1075 1180 -3309 3 1837 475 250 107 8 chrX 164210743 164210864 -2439432 - B3 SINE B2 -10 206 74 3 1837 219 36 0 0 chrX 164212426 164212454 -2437842 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 1837 611 290 50 37 chrX 164212534 164212695 -2437601 + RSINE1 SINE B4 3 165 0 3 1837 872 322 52 7 chrX 164212714 164213023 -2437273 + Lx8 LINE L1 6700 7022 -451 3 1837 528 16 0 0 chrX 164213844 164213905 -2436391 + (TC)n Simple_repeat Simple_repeat 1 61 0 3 1837 207 0 0 0 chrX 164213905 164213927 -2436369 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 1837 238 191 44 22 chrX 164218119 164218210 -2432086 + (TA)n Simple_repeat Simple_repeat 2 94 0 3 1837 780 299 14 29 chrX 164219556 164219766 -2430530 + ID_B1 SINE B4 1 207 -17 3 1837 233 288 27 27 chrX 164219939 164220014 -2430282 + B4 SINE B4 3 77 -215 3 1837 441 0 0 0 chrX 164220087 164220136 -2430160 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1837 505 240 40 93 chrX 164220192 164220417 -2429879 + MER20 DNA MER1_type 4 216 -3 3 1837 243 0 0 0 chrX 164221803 164221830 -2428466 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 1837 348 127 0 0 chrX 164221830 164221885 -2428411 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 1837 363 293 2 27 chrX 164222090 164222253 -2428043 - MER5A DNA MER1_type -6 160 1 3 1837 213 132 0 0 chrX 164223008 164223046 -2427250 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 3 1837 948 281 3 116 chrX 164223092 164223386 -2426910 + B4A SINE B4 5 265 -27 3 1837 318 87 0 0 chrX 164223404 164223450 -2426846 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1837 761 300 62 31 chrX 164223884 164224176 -2426120 + MER33 DNA MER1_type 1 301 -23 3 1837 510 310 279 12 chrX 164224202 164224531 -2425765 - L1MB7 LINE L1 -23 6161 5745 3 1837 391 318 18 18 chrX 164224954 164225063 -2425233 + Charlie17a DNA MER1_type 21 129 -90 3 1837 450 280 8 8 chrX 164225114 164225240 -2425056 - MER94 DNA AcHobo -7 127 2 3 1837 305 24 24 0 chrX 164225376 164225418 -2424878 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1837 450 0 0 0 chrX 164225418 164225467 -2424829 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 1837 1087 301 9 33 chrX 164225505 164225810 -2424486 - B4 SINE B4 -6 286 1 3 1837 568 304 124 31 chrX 164226999 164227322 -2422974 - ORR1E LTR MaLR -4 355 3 3 1837 227 381 39 8 chrX 164227475 164227602 -2422694 - MIRc SINE MIR -115 153 23 3 1837 438 343 49 5 chrX 164228042 164228247 -2422049 - LTR40b LTR ERVL -4 458 245 3 1837 190 276 0 108 chrX 164228688 164228753 -2421543 - L2b LINE L2 0 3375 3318 3 1837 247 294 0 0 chrX 164229979 164230064 -2420232 + GA-rich Low_complexity Low_complexity 2 86 0 3 1837 342 67 0 0 chrX 164230068 164230113 -2420183 + (GGGAGA)n Simple_repeat Simple_repeat 4 48 0 3 1837 282 292 0 53 chrX 164230220 164230314 -2419982 + ID_B1 SINE B4 93 181 -43 3 1837 332 344 37 27 chrX 164230479 164230619 -2419677 - B1F SINE Alu -5 144 3 3 1837 22 56 0 0 chrX 164230853 164230889 -2419407 + AT_rich Low_complexity Low_complexity 1 36 0 3 1837 207 100 0 0 chrX 164231471 164231501 -2418795 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1837 439 345 180 4 chrX 164231515 164231754 -2418542 - B4 SINE B4 -8 284 4 4 229 896 294 120 45 chrX 164233164 164233681 -2416615 + Lx9 LINE L1 7074 7629 -15 4 1838 23 54 0 0 chrX 164233681 164233718 -2416578 + AT_rich Low_complexity Low_complexity 1 37 0 4 1838 450 0 0 0 chrX 164233730 164233780 -2416516 + (GGAA)n Simple_repeat Simple_repeat 4 53 0 4 1838 1385 294 41 8 chrX 164233895 164234262 -2416034 - Tigger7 DNA MER2_type -2112 379 1 4 1838 305 361 60 0 chrX 164234316 164234499 -2415797 + L1M5 LINE L1 5562 5755 -369 4 1838 274 204 0 0 chrX 164234713 164234757 -2415539 - ID_B1 SINE B4 -11 213 170 4 1838 258 61 0 58 chrX 164234984 164235036 -2415260 + (CAA)n Simple_repeat Simple_repeat 2 50 0 4 1838 1016 83 13 6 chrX 164235214 164235372 -2414924 + L1_Mus3 LINE L1 6479 6637 -1 4 1838 23 0 0 0 chrX 164236122 164236145 -2414151 + AT_rich Low_complexity Low_complexity 1 23 0 4 1838 395 231 9 0 chrX 164236309 164236417 -2413879 + GA-rich Low_complexity Low_complexity 1 109 0 4 1838 314 224 129 0 chrX 164236758 164236843 -2413453 - MLT1F1 LTR MaLR 0 560 465 4 1838 354 331 68 45 chrX 164236857 164236990 -2413306 - MLT1F1 LTR MaLR -164 405 270 4 1838 270 0 0 0 chrX 164237193 164237223 -2413073 + (GA)n Simple_repeat Simple_repeat 1 30 0 4 1838 444 182 0 0 chrX 164237273 164237361 -2412935 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 4 1838 1961 118 9 12 chrX 164237849 164238174 -2412122 + L1_Mus4 LINE L1 6313 6636 0 4 1838 228 303 28 21 chrX 164239037 164239182 -2411114 - L1MA5 LINE L1 -16 6284 6139 4 1838 279 331 59 13 chrX 164239746 164239899 -2410397 + MER5A1 DNA MER1_type 1 160 -6 4 1838 1179 62 7 0 chrX 164240192 164240337 -2409959 + B1_Mus1 SINE Alu 3 148 0 4 1838 3964 97 29 0 chrX 164240514 164241060 -2409236 + Lx LINE L1 6092 6653 -1 4 1838 489 17 0 0 chrX 164241967 164242025 -2408271 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 1838 240 130 0 0 chrX 164242343 164242389 -2407907 + (TCTG)n Simple_repeat Simple_repeat 3 48 0 4 1838 990 200 3 3 chrX 164242398 164242714 -2407582 + CT-rich Low_complexity Low_complexity 1 316 0 4 1838 369 0 0 0 chrX 164242730 164242771 -2407525 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 4 1838 552 247 104 26 chrX 164242808 164242962 -2407334 - ID_B1 SINE B4 -36 188 23 4 1838 289 324 27 68 chrX 164242996 164243142 -2407154 + B1_Mm SINE Alu 1 140 -7 4 1838 21 0 0 0 chrX 164243151 164243172 -2407124 + AT_rich Low_complexity Low_complexity 1 21 0 4 1838 384 304 24 8 chrX 164243175 164243301 -2406995 - MIRb SINE MIR -34 234 107 4 1838 817 226 67 6 chrX 164243330 164243508 -2406788 + B3A SINE B2 1 189 -9 4 1838 216 135 0 0 chrX 164244237 164244274 -2406022 + (TTATA)n Simple_repeat Simple_repeat 2 38 0 4 1838 378 0 0 0 chrX 164245923 164245965 -2404331 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1838 188 111 0 27 chrX 164245968 164246005 -2404291 + (GGGAGA)n Simple_repeat Simple_repeat 1 36 0 4 1838 368 236 80 65 chrX 164246211 164246410 -2403886 + RMER17D LTR ERVK 365 566 -323 4 1838 626 284 7 0 chrX 164246313 164246454 -2403842 - B1_Mur2 SINE Alu -5 144 3 4 1838 417 282 181 32 chrX 164247234 164247483 -2402813 + B4A SINE B4 3 288 -4 4 1838 261 293 10 20 chrX 164248095 164248196 -2402100 + GA-rich Low_complexity Low_complexity 2 101 0 4 1838 821 274 32 97 chrX 164250841 164250934 -2399362 + B4A SINE B4 2 91 -201 4 1838 3433 41 2 0 chrX 164250934 164251350 -2398946 + L1Md_F2 LINE L1 6166 6582 0 4 1838 821 274 32 97 chrX 164251350 164251567 -2398729 + B4A SINE B4 92 292 0 4 1838 1661 232 59 8 chrX 164252859 164253246 -2397050 - MTD LTR MaLR -8 411 5 4 1838 757 286 132 46 chrX 164253326 164253674 -2396622 - MTEa LTR MaLR -1 378 1 4 1838 946 291 26 20 chrX 164253943 164254245 -2396051 + Kanga1 DNA Tc2 188 493 -1252 4 1838 573 319 89 52 chrX 164254259 164254586 -2395710 + Kanga1 DNA Tc2 1276 1614 -131 4 1838 276 53 0 0 chrX 164254715 164254753 -2395543 + (T)n Simple_repeat Simple_repeat 1 38 0 4 1838 670 241 40 57 chrX 164255368 164255544 -2394752 + B3 SINE B2 5 177 -39 4 1838 378 0 0 0 chrX 164255546 164255588 -2394708 + (TC)n Simple_repeat Simple_repeat 2 43 0 4 1838 394 266 44 59 chrX 164255639 164255775 -2394521 - RSINE1 SINE B4 -28 137 4 4 1838 21 0 0 0 chrX 164255775 164255796 -2394500 + AT_rich Low_complexity Low_complexity 1 21 0 4 1838 394 304 63 77 chrX 164257008 164257229 -2393067 - ID_B1 SINE B4 -2 222 5 4 1838 2598 227 56 133 chrX 164257711 164259133 -2391163 + RMER1A Other Other 1 1020 -10 4 1838 207 328 23 85 chrX 164259249 164259394 -2390902 - MIRb SINE MIR -2 260 124 4 1838 314 357 49 0 chrX 164259538 164259681 -2390615 + MLT1D LTR MaLR 21 170 -335 4 1838 384 292 98 104 chrX 164259792 164260120 -2390176 + MLT1D LTR MaLR 179 504 -1 4 1838 802 253 30 20 chrX 164260483 164260681 -2389615 + B3 SINE B2 1 200 -16 4 1838 320 293 12 35 chrX 164261119 164261204 -2389092 - ID4_ SINE ID 0 83 1 4 1838 729 128 0 0 chrX 164261560 164261685 -2388611 + (CA)n Simple_repeat Simple_repeat 2 126 0 4 1838 276 363 18 9 chrX 164261740 164261854 -2388442 - MER5A DNA MER1_type -1 188 74 4 1838 351 330 28 0 chrX 164261920 164262026 -2388270 + MER58A DNA MER1_type 31 139 -85 4 1838 531 295 7 41 chrX 164262057 164262202 -2388094 - ID_B1 SINE B4 -2 222 83 4 1838 224 30 30 0 chrX 164262634 164262667 -2387629 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1838 426 108 0 0 chrX 164262667 164262741 -2387555 + (GA)n Simple_repeat Simple_repeat 2 75 0 4 1838 186 0 57 29 chrX 164263005 164263040 -2387256 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 4 1838 474 167 0 0 chrX 164263474 164263582 -2386714 + CT-rich Low_complexity Low_complexity 1 108 0 4 1838 420 71 0 0 chrX 164263584 164263640 -2386656 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 1838 414 39 0 0 chrX 164264761 164264813 -2385483 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 1838 741 229 116 32 chrX 164264865 164265054 -2385242 - B4A SINE B4 -86 206 2 4 1838 403 338 78 42 chrX 164265080 164265247 -2385049 - MLT1A1 LTR MaLR -71 337 165 4 1838 456 293 82 15 chrX 164265259 164265394 -2384902 - B1F SINE Alu -1 148 5 4 1838 287 340 19 0 chrX 164266700 164266803 -2383493 + GA-rich Low_complexity Low_complexity 3 107 0 4 1838 425 357 0 8 chrX 164267939 164268066 -2382230 - B4A SINE B4 -2 290 165 4 1838 1133 297 45 98 chrX 164269110 164269643 -2380653 + MER44B DNA MER2_type 7 511 -39 4 1838 438 20 0 0 chrX 164269840 164269891 -2380405 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1838 1051 195 34 14 chrX 164269909 164270117 -2380179 + B3 SINE B2 4 215 -1 4 1838 261 0 0 0 chrX 164270409 164270438 -2379858 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1838 360 202 160 10 chrX 164270447 164270547 -2379749 - L2a LINE L2 -4 3422 3308 4 1838 883 208 75 0 chrX 164271650 164271823 -2378473 + B3 SINE B2 24 209 -7 4 1838 1111 73 0 0 chrX 164271831 164271967 -2378329 + B1_Mus2 SINE Alu 2 137 -10 4 1838 261 22 21 42 chrX 164271967 164272015 -2378281 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 4 1838 1607 210 26 67 chrX 164272747 164273135 -2377161 - ORR1D1 LTR MaLR 0 374 3 4 1838 2917 301 57 20 chrX 164273444 164274482 -2375814 + Lx7 LINE L1 6231 7306 -390 4 1838 486 353 124 43 chrX 164274799 164275125 -2375171 + MLT1J1 LTR MaLR 41 396 -48 4 1838 273 119 0 0 chrX 164275125 164275167 -2375129 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1838 486 353 124 43 chrX 164275167 164275210 -2375086 + MLT1J1 LTR MaLR 397 439 -5 4 1838 203 0 37 0 chrX 164276455 164276482 -2373814 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 1838 231 304 88 0 chrX 164276488 164276590 -2373706 - Lx9 LINE L1 -667 6977 6867 4 1838 271 321 49 35 chrX 164276630 164276833 -2373463 + Lx9 LINE L1 7057 7262 -382 4 1838 236 271 14 14 chrX 164276889 164276960 -2373336 + Lx9 LINE L1 7363 7433 -211 4 1838 810 31 0 0 chrX 164277169 164277266 -2373030 + (TTCCC)n Simple_repeat Simple_repeat 3 99 0 4 1838 279 0 0 0 chrX 164277814 164277845 -2372451 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1838 261 274 0 0 chrX 164278379 164278441 -2371855 - MER53 DNA hAT -3 190 129 4 1838 753 312 10 0 chrX 164278788 164278996 -2371300 + ID_B1 SINE B4 3 212 -12 4 1838 1359 36 0 0 chrX 164279004 164279169 -2371127 - L1_Mus1 LINE L1 -1 6566 6402 4 1838 26 0 0 0 chrX 164279246 164279272 -2371024 + AT_rich Low_complexity Low_complexity 1 26 0 4 1838 513 71 0 0 chrX 164279873 164279943 -2370353 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 4 1838 979 318 16 12 chrX 164279985 164280413 -2369883 - Lx9 LINE L1 -186 7458 6888 4 1838 990 269 50 26 chrX 164280412 164280752 -2369544 + Lx9 LINE L1 6636 6983 -661 4 1838 231 292 56 0 chrX 164281729 164281818 -2368478 - L1MA7 LINE L1 -24 6267 6174 4 1838 742 259 4 26 chrX 164281839 164282069 -2368227 - L1MA7 LINE L1 -455 5836 5612 4 1838 415 298 1 6 chrX 164282127 164282233 -2368063 - B1F SINE Alu 0 117 16 4 1838 222 279 0 32 chrX 164282188 164282251 -2368045 - B4A SINE B4 -147 145 85 4 1838 279 317 54 16 chrX 164282342 164282528 -2367768 - L1ME3 LINE L1 -70 6092 5900 4 1838 1074 116 0 0 chrX 164282608 164282754 -2367542 - B1_Mus1 SINE Alu -2 146 1 4 1838 917 131 27 27 chrX 164283813 164283950 -2366346 + B1_Mur4 SINE Alu 1 138 -12 4 1838 351 0 0 0 chrX 164283950 164283989 -2366307 + (CTAA)n Simple_repeat Simple_repeat 3 41 0 4 1838 917 131 27 27 chrX 164283989 164284000 -2366296 + B1_Mur4 SINE Alu 139 149 -1 4 1838 186 133 0 0 chrX 164284001 164284031 -2366265 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1838 21 36 0 0 chrX 164285241 164285269 -2365027 + AT_rich Low_complexity Low_complexity 1 28 0 4 1838 369 0 0 0 chrX 164285640 164285681 -2364615 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1838 1069 262 43 17 chrX 164286285 164286631 -2363665 + ORR1E LTR MaLR 3 357 -2 5 1838 1004 212 9 35 chrX 164287260 164287490 -2362806 - URR1B DNA MER1_type 0 225 2 5 1838 225 0 0 0 chrX 164287592 164287617 -2362679 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 5 1838 372 238 24 15 chrX 164287688 164287785 -2362511 - MER20 DNA MER1_type -51 168 70 5 1838 288 277 15 16 chrX 164288179 164288371 -2361925 + L1MA4A LINE L1 5665 5917 -386 5 1838 312 48 0 0 chrX 164288676 164288718 -2361578 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1838 1728 89 4 0 chrX 164289142 164289390 -2360906 + Lx3_Mus LINE L1 6272 6520 -489 5 1838 2571 67 40 6 chrX 164289390 164289737 -2360559 + L1_Mus1 LINE L1 6209 6567 0 5 1838 3368 84 23 8 chrX 164289740 164290220 -2360076 + Lx3_Mus LINE L1 6523 7009 0 5 1838 1502 65 25 0 chrX 164290859 164291058 -2359238 - L1_Mus1 LINE L1 0 6567 6364 5 1838 286 171 29 0 chrX 164291255 164291325 -2358971 + (CA)n Simple_repeat Simple_repeat 2 73 0 5 1838 462 18 0 0 chrX 164293602 164293657 -2356639 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 1838 456 331 16 8 chrX 164294246 164294371 -2355925 + RSINE1 SINE B4 4 129 -36 5 1838 1323 242 26 90 chrX 164294469 164294671 -2355625 - MTE2b LTR MaLR -5 374 186 5 1838 5157 125 10 92 chrX 164294671 164294997 -2355299 + RMER17A2 LTR ERVK 1 316 -590 5 1838 853 97 0 27 chrX 164294997 164295146 -2355150 + (TC)n Simple_repeat Simple_repeat 1 145 0 5 1838 5157 125 10 92 chrX 164295146 164295806 -2354490 + RMER17A2 LTR ERVK 317 906 0 5 1838 1323 242 26 90 chrX 164295806 164295993 -2354303 - MTE2b LTR MaLR -194 185 10 5 1838 463 263 69 0 chrX 164295999 164296174 -2354122 + Lx7 LINE L1 5983 6169 -1527 5 1838 297 0 0 0 chrX 164296233 164296266 -2354030 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1838 438 103 0 0 chrX 164296266 164296344 -2353952 + (GA)n Simple_repeat Simple_repeat 1 78 0 5 1838 1310 247 0 3 chrX 164296349 164296641 -2353655 + Lx6 LINE L1 6202 6492 -968 5 1838 252 137 0 0 chrX 164296643 164296694 -2353602 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 5 1838 2866 268 37 23 chrX 164296708 164297487 -2352809 + Lx6 LINE L1 6502 7291 -169 5 1838 186 43 0 0 chrX 164297617 164297640 -2352656 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 1838 22 103 0 0 chrX 164297772 164297850 -2352446 + AT_rich Low_complexity Low_complexity 1 78 0 5 1838 26 50 0 0 chrX 164298128 164298168 -2352128 + AT_rich Low_complexity Low_complexity 1 40 0 5 1838 962 251 0 0 chrX 164298171 164298366 -2351930 - B3 SINE B2 -17 199 5 5 1838 1081 38 12 19 chrX 164298507 164298669 -2351627 + (GGAGA)n Simple_repeat Simple_repeat 1 161 0 5 1838 285 128 0 0 chrX 164299642 164299689 -2350607 + (CTA)n Simple_repeat Simple_repeat 1 47 0 5 1838 205 128 51 0 chrX 164299703 164299742 -2350554 + GA-rich Low_complexity Low_complexity 2 42 0 5 1838 781 292 71 73 chrX 164300314 164300671 -2349625 - ORR1E LTR MaLR -6 415 1 5 1838 460 293 43 7 chrX 164301242 164301383 -2348913 - B1F SINE Alu -1 148 3 5 1838 388 214 19 67 chrX 164301579 164301684 -2348612 + PB1D10 SINE Alu 3 102 -15 5 1838 691 253 183 4 chrX 164301810 164302040 -2348256 + B4A SINE B4 3 273 -19 5 1838 213 39 0 0 chrX 164302095 164302121 -2348175 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1838 644 132 8 0 chrX 164302121 164302250 -2348046 + (GA)n Simple_repeat Simple_repeat 1 130 0 5 1838 258 267 120 28 chrX 164302364 164302472 -2347824 + MER53 DNA hAT 3 120 -73 5 1838 21 0 0 0 chrX 164302534 164302555 -2347741 + AT_rich Low_complexity Low_complexity 1 21 0 5 1838 651 265 106 63 chrX 164303025 164303279 -2347017 + MER2 DNA MER2_type 79 343 -2 5 1838 506 316 101 87 chrX 164303308 164303596 -2346700 + B4A SINE B4 1 292 0 5 1838 369 0 0 0 chrX 164303831 164303872 -2346424 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1838 634 269 50 14 chrX 164304872 164305244 -2345052 + Lx7 LINE L1 5476 5833 -1225 5 1838 423 0 0 0 chrX 164305265 164305312 -2344984 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1838 5702 180 88 156 chrX 164305368 164307821 -2342475 - ORR1B1-int LTR MaLR -27 1936 1 5 1838 925 152 6 24 chrX 164307823 164307992 -2342304 - ORR1B1 LTR MaLR -4 325 160 5 1838 279 0 0 0 chrX 164307992 164308023 -2342273 + (TC)n Simple_repeat Simple_repeat 2 32 0 5 1838 3159 77 27 5 chrX 164308062 164308508 -2341788 - L1_Mus3 LINE L1 0 6638 6183 5 1838 4293 88 2 0 chrX 164308508 164309222 -2341074 + L1_Mus3 LINE L1 5469 6183 -455 5 1838 695 199 82 51 chrX 164309226 164309422 -2340874 - ORR1B1 LTR MaLR -169 225 24 5 1838 206 179 18 0 chrX 164309665 164309721 -2340575 + (TA)n Simple_repeat Simple_repeat 1 57 0 5 1838 1325 287 74 41 chrX 164311440 164312072 -2338224 + Lx8 LINE L1 6817 7469 -4 5 1838 1270 22 5 38 chrX 164313406 164313592 -2336704 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 1838 740 333 8 20 chrX 164313710 164313955 -2336341 + RMER15 LTR ERVL 298 539 -36 5 1838 633 288 18 12 chrX 164314827 164314992 -2335304 + B3A SINE B2 8 173 -25 5 1838 257 0 30 0 chrX 164314992 164315025 -2335271 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 1838 286 278 80 101 chrX 164315025 164315047 -2335249 + B2_Mm2 SINE B2 171 191 -4 5 1838 204 167 83 0 chrX 164315062 164315110 -2335186 + GA-rich Low_complexity Low_complexity 2 53 0 5 1838 852 102 0 0 chrX 164315223 164315370 -2334926 + (TC)n Simple_repeat Simple_repeat 2 148 0 5 1838 222 37 0 0 chrX 164315370 164315396 -2334900 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1838 1251 27 0 14 chrX 164315481 164315629 -2334667 + B1_Mm SINE Alu 2 147 0 5 1838 351 389 104 18 chrX 164315729 164316056 -2334240 + MER74A LTR ERVL 126 480 -78 5 1838 285 75 0 0 chrX 164317085 164317125 -2333171 + (CATA)n Simple_repeat Simple_repeat 3 42 0 5 1838 1221 48 0 0 chrX 164317190 164317337 -2332959 + B1_Mus2 SINE Alu 1 147 0 5 1838 285 51 0 0 chrX 164317337 164317376 -2332920 + (A)n Simple_repeat Simple_repeat 1 39 0 5 1838 773 191 196 0 chrX 164317548 164317737 -2332559 - URR1A DNA MER1_type 0 226 1 5 1838 243 328 14 56 chrX 164317756 164317827 -2332469 + ID4 SINE ID 16 83 0 5 1838 816 69 0 0 chrX 164317911 164318027 -2332269 + (GA)n Simple_repeat Simple_repeat 1 116 0 5 1838 374 278 214 28 chrX 164318044 164318259 -2332037 + MLT1C LTR MaLR 213 467 0 5 1838 642 229 48 59 chrX 164318681 164318867 -2331429 + B4A SINE B4 104 287 -5 5 1838 339 96 0 0 chrX 164318889 164318941 -2331355 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1838 2018 49 0 0 chrX 164319380 164319626 -2330670 - L1_Mus1 LINE L1 -3 6564 6319 5 1838 324 374 90 39 chrX 164320627 164320805 -2329491 + B4A SINE B4 4 190 -102 5 1838 513 71 0 0 chrX 164320858 164320928 -2329368 + (CA)n Simple_repeat Simple_repeat 1 70 0 5 1838 27 0 0 0 chrX 164320990 164321017 -2329279 + AT_rich Low_complexity Low_complexity 1 27 0 5 1838 864 254 64 73 chrX 164321833 164322241 -2328055 - L1MB3 LINE L1 -15 6168 5765 5 1838 276 257 25 139 chrX 164323660 164323716 -2326580 + MT2B2 LTR ERVL 118 155 -429 5 1838 845 204 14 0 chrX 164323716 164323863 -2326433 + B1_Mur2 SINE Alu 1 149 0 5 1838 335 351 6 73 chrX 164324118 164324296 -2326000 - Arthur1A DNA Tip100 -11 166 1 5 1838 1213 217 101 6 chrX 164324780 164325118 -2325178 + Lx9 LINE L1 7264 7633 -11 5 1838 317 315 61 63 chrX 164325340 164325781 -2324515 + L1ME3A LINE L1 5416 5855 -318 5 1838 345 174 0 0 chrX 164326968 164327037 -2323259 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 1838 198 0 0 0 chrX 164327050 164327072 -2323224 + (CAGA)n Simple_repeat Simple_repeat 1 22 0 5 1838 183 80 0 0 chrX 164327239 164327264 -2323032 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 5 1838 398 20 0 19 chrX 164327266 164327318 -2322978 + (GAAA)n Simple_repeat Simple_repeat 3 53 0 5 1838 470 303 124 53 chrX 164328162 164328427 -2321869 + B4A SINE B4 2 285 -7 5 1838 21 36 0 0 chrX 164329101 164329129 -2321167 + AT_rich Low_complexity Low_complexity 1 28 0 5 1838 244 205 0 0 chrX 164329150 164329189 -2321107 + tRNA-Thr-ACY_ tRNA tRNA 2 40 -37 5 1838 1716 188 46 38 chrX 164329786 164330157 -2320139 + ORR1D1 LTR MaLR 1 374 0 5 1838 221 338 54 0 chrX 164330731 164330805 -2319491 - BC1_Mm scRNA scRNA -57 95 18 5 1838 243 0 0 0 chrX 164331550 164331577 -2318719 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1838 243 300 0 12 chrX 164332010 164332091 -2318205 + GA-rich Low_complexity Low_complexity 2 81 0 5 1838 245 340 41 10 chrX 164333437 164333535 -2316761 + MIR SINE MIR 1 101 -161 5 1838 755 305 15 5 chrX 164333902 164334100 -2316196 - ID_B1 SINE B4 -23 201 2 5 1838 2049 212 75 25 chrX 164334258 164334404 -2315892 + Lx7 LINE L1 7056 7206 -490 5 1838 189 0 0 0 chrX 164334404 164334425 -2315871 + (TA)n Simple_repeat Simple_repeat 1 21 0 5 1838 2049 212 75 25 chrX 164334425 164334888 -2315408 + Lx7 LINE L1 7207 7695 -1 5 1838 492 99 0 0 chrX 164334909 164334980 -2315316 + (GA)n Simple_repeat Simple_repeat 1 71 0 5 1838 203 156 0 43 chrX 164335143 164335190 -2315106 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 5 1838 514 203 86 2 chrX 164335419 164335551 -2314745 + MIRc SINE MIR 22 164 -104 5 1838 185 220 19 57 chrX 164335559 164335612 -2314684 + L2b LINE L2 3319 3369 -6 5 1838 417 324 26 88 chrX 164336215 164336408 -2313888 + B4 SINE B4 6 186 -106 5 1838 381 312 45 0 chrX 164336549 164336661 -2313635 + RMER30 DNA MER1_type 85 201 -1 5 1838 335 261 0 42 chrX 164336952 164337024 -2313272 + ID4_ SINE ID 5 73 -10 5 1838 986 277 90 44 chrX 164338521 164338865 -2311431 + MTE2b LTR MaLR 16 375 -4 5 1838 261 0 0 0 chrX 164338865 164338894 -2311402 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1838 306 0 0 0 chrX 164338894 164338927 -2311369 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 1838 407 273 0 20 chrX 164340247 164340348 -2309948 + 5S rRNA rRNA 2 100 -21 6 1838 206 188 0 30 chrX 164341232 164341298 -2308998 + (TTATA)n Simple_repeat Simple_repeat 1 64 0 6 1838 2552 70 9 9 chrX 164341432 164341776 -2308520 + L1Md_F2 LINE L1 6237 6580 -2 6 1838 571 272 101 15 chrX 164341782 164341980 -2308316 - B3 SINE B2 0 216 2 6 1838 632 280 0 7 chrX 164342431 164342575 -2307721 + B1_Mur1 SINE Alu 6 148 -1 6 1838 680 319 12 6 chrX 164342587 164342757 -2307539 + B3 SINE B2 1 171 -45 6 1838 3937 68 0 2 chrX 164343729 164344271 -2306025 + L1_Mm LINE L1 4672 5212 -671 6 1838 599 296 118 0 chrX 164344271 164344390 -2305906 - B3 SINE B2 -3 213 84 6 1838 360 0 0 0 chrX 164344390 164344430 -2305866 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1838 599 296 118 0 chrX 164344430 164344496 -2305800 - B3 SINE B2 -133 83 8 6 1838 560 27 14 0 chrX 164344570 164344644 -2305652 + (TC)n Simple_repeat Simple_repeat 1 75 0 6 1838 423 282 18 0 chrX 164344645 164344755 -2305541 - PB1D10 SINE Alu -4 113 2 6 1838 526 318 57 113 chrX 164344860 164345232 -2305064 - ORR1E LTR MaLR -8 351 1 6 1838 409 312 138 28 chrX 164345605 164345750 -2304546 + MER58A DNA MER1_type 1 161 -63 6 1838 410 331 0 8 chrX 164346120 164346248 -2304048 + ID_B1 SINE B4 80 206 -18 6 1838 283 250 48 39 chrX 164346666 164346770 -2303526 - RMER15 LTR ERVL -62 513 409 6 1838 204 324 103 51 chrX 164347192 164347309 -2302987 - MIRb SINE MIR -40 228 106 6 1838 1287 0 0 0 chrX 164348335 164348478 -2301818 + (GGGAGA)n Simple_repeat Simple_repeat 3 145 0 6 1838 681 312 50 5 chrX 164349563 164349763 -2300533 + MER20 DNA MER1_type 11 219 0 6 1838 543 293 15 0 chrX 164350398 164350531 -2299765 + MER58A DNA MER1_type 24 158 -66 6 1838 1780 182 3 13 chrX 164350801 164351113 -2299183 - MTC LTR MaLR -8 413 105 6 1838 195 42 0 0 chrX 164351163 164351187 -2299109 + (TTTC)n Simple_repeat Simple_repeat 1 24 0 6 1838 8031 26 0 0 chrX 164351190 164352389 -2297907 - L1Md_T LINE L1 -12 6570 5372 6 1838 439 181 0 26 chrX 164352389 164352487 -2297809 - MTC LTR MaLR -325 96 1 6 1838 1366 264 8 32 chrX 164354633 164355012 -2295284 + ORR1D2 LTR MaLR 1 370 0 6 1838 242 180 0 16 chrX 164355247 164355309 -2294987 + (TATG)n Simple_repeat Simple_repeat 4 64 0 6 1838 679 287 39 5 chrX 164355860 164356063 -2294233 + B3 SINE B2 1 210 -6 6 1838 201 264 222 33 chrX 164356995 164357085 -2293211 + MIR SINE MIR 118 224 -38 6 1838 637 251 5 143 chrX 164358064 164358118 -2292178 + B4 SINE B4 36 75 -217 6 1838 859 73 186 0 chrX 164358118 164358242 -2292054 - B1_Mm SINE Alu 0 147 1 6 1838 637 251 5 143 chrX 164358242 164358396 -2291900 + B4 SINE B4 76 215 -77 6 1838 374 214 111 46 chrX 164358654 164358762 -2291534 + MT2B LTR ERVL 150 264 -337 6 1838 824 63 0 9 chrX 164358684 164358796 -2291500 + B1_Mm SINE Alu 35 145 -2 6 1838 842 292 53 61 chrX 164358925 164359432 -2290864 - Charlie7 DNA MER1_type -453 2159 1657 6 1838 573 15 0 0 chrX 164359621 164359687 -2290609 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 1838 464 282 20 66 chrX 164359732 164359884 -2290412 + B3 SINE B2 66 210 -6 6 1838 3845 53 0 19 chrX 164361089 164361573 -2288723 + L1Md_F2 LINE L1 6096 6570 -12 6 1838 261 0 0 0 chrX 164361685 164361714 -2288582 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6 1838 369 285 148 34 chrX 164362484 164362533 -2287763 + ID_B1 SINE B4 59 224 0 6 1838 398 185 60 80 chrX 164362533 164362633 -2287663 + PB1D7 SINE Alu 23 120 0 6 229 636 330 6 6 chrX 164364176 164364350 -2285946 - B3 SINE B2 -42 174 1 6 1839 249 33 0 0 chrX 164364400 164364430 -2285866 + (TTTCC)n Simple_repeat Simple_repeat 1 30 0 6 1839 1056 102 23 6 chrX 164364431 164364608 -2285688 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 6 1839 632 280 15 0 chrX 164364806 164364938 -2285358 - B3 SINE B2 -81 135 2 6 1839 2436 65 9 9 chrX 164365044 164365368 -2284928 + L1Md_F2 LINE L1 6257 6580 -2 6 1839 749 158 18 18 chrX 164365440 164365608 -2284688 + CT-rich Low_complexity Low_complexity 2 169 0 6 1839 351 315 18 9 chrX 164365617 164365726 -2284570 - PB1D10 SINE Alu 0 117 8 6 1839 671 284 16 47 chrX 164366080 164366272 -2284024 - B3 SINE B2 -11 205 20 6 1839 351 0 0 0 chrX 164366342 164366381 -2283915 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1839 216 97 0 0 chrX 164366381 164366412 -2283884 + (GGA)n Simple_repeat Simple_repeat 3 33 0 6 1839 341 217 217 0 chrX 164366413 164366519 -2283777 - B3A SINE B2 -64 134 6 6 1839 434 328 100 26 chrX 164367087 164367397 -2282899 + L1MEg LINE L1 742 1074 -5010 6 1839 231 264 85 12 chrX 164367839 164368004 -2282292 + L1MEg LINE L1 1219 1395 -4689 6 1839 265 242 29 57 chrX 164368233 164368338 -2281958 + GA-rich Low_complexity Low_complexity 3 104 0 6 1839 564 120 0 0 chrX 164368341 164368441 -2281855 + (GA)n Simple_repeat Simple_repeat 1 100 0 6 1839 1433 221 94 29 chrX 164368578 164368865 -2281431 + ORR1C2 LTR MaLR 12 328 -56 6 1839 1011 37 0 0 chrX 164368865 164368999 -2281297 - L1Md_T LINE L1 -1 6581 6448 6 1839 1433 221 94 29 chrX 164368999 164369061 -2281235 + ORR1C2 LTR MaLR 329 384 0 6 1839 1328 95 21 0 chrX 164369158 164369348 -2280948 - B2_Mm2 SINE B2 -1 194 1 6 1839 315 0 0 0 chrX 164369375 164369410 -2280886 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1839 288 320 67 74 chrX 164369713 164369848 -2280448 - RSINE1 SINE B4 -21 144 11 6 1839 1111 82 7 0 chrX 164369935 164370081 -2280215 - B1_Mus1 SINE Alu 0 148 2 6 1839 387 0 0 0 chrX 164370082 164370125 -2280171 + (T)n Simple_repeat Simple_repeat 1 43 0 6 1839 2946 82 19 2 chrX 164370681 164371095 -2279201 + BGLII LTR ERVK 1 421 0 6 1839 515 304 62 108 chrX 164371435 164371741 -2278555 - B4 SINE B4 0 292 1 6 1839 273 369 154 0 chrX 164372190 164372320 -2277976 - B3 SINE B2 -66 150 1 6 1839 405 0 0 0 chrX 164372469 164372514 -2277782 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1839 434 289 143 68 chrX 164372841 164373078 -2277218 + MER2 DNA MER2_type 1 255 -90 6 1839 294 29 0 0 chrX 164373078 164373113 -2277183 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1839 450 0 0 0 chrX 164373112 164373162 -2277134 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 1839 306 0 0 0 chrX 164373162 164373196 -2277100 + (GA)n Simple_repeat Simple_repeat 2 35 0 6 1839 267 271 17 0 chrX 164373211 164373270 -2277026 + MER2 DNA MER2_type 284 343 -2 6 1839 2965 248 67 33 chrX 164374129 164375111 -2275185 - RMER1C Other Other 0 1342 224 6 1839 712 254 174 15 chrX 164375518 164375586 -2274710 + B4 SINE B4 4 71 -221 6 1839 5383 38 8 1 chrX 164375586 164376241 -2274055 + L1Md_F3 LINE L1 5926 6584 0 6 1839 712 254 174 15 chrX 164376241 164376368 -2273928 + B4 SINE B4 72 230 -62 6 1839 293 206 10 0 chrX 164376438 164376535 -2273761 + GA-rich Low_complexity Low_complexity 2 99 0 6 1839 763 296 21 0 chrX 164377075 164377264 -2273032 + B4 SINE B4 50 242 -50 6 1839 351 44 0 0 chrX 164377351 164377396 -2272900 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1839 22 56 0 0 chrX 164377936 164377972 -2272324 + AT_rich Low_complexity Low_complexity 1 36 0 6 1839 27 29 0 0 chrX 164379585 164379619 -2270677 + AT_rich Low_complexity Low_complexity 1 34 0 6 1839 445 43 85 21 chrX 164381025 164381119 -2269177 + (TCTCTG)n Simple_repeat Simple_repeat 3 102 0 6 1839 603 40 0 0 chrX 164381119 164381193 -2269103 + (TG)n Simple_repeat Simple_repeat 1 74 0 6 1839 384 82 0 0 chrX 164381193 164381254 -2269042 + (GA)n Simple_repeat Simple_repeat 2 62 0 6 1839 592 294 91 9 chrX 164381842 164382182 -2268114 + L1M2 LINE L1 5422 5789 -511 6 1839 777 312 61 29 chrX 164382349 164382626 -2267670 + RMER15 LTR ERVL 289 574 -1 6 1839 261 341 81 42 chrX 164383120 164383380 -2266916 - B4 SINE B4 -18 274 5 6 1839 962 291 103 65 chrX 164383471 164383975 -2266321 + RMER5 LTR ERV1 1 523 -11 6 1839 868 80 0 0 chrX 164383975 164384088 -2266208 + B1_Mm SINE Alu 35 147 0 6 1839 609 357 43 4 chrX 164384254 164384535 -2265761 + B4 SINE B4 1 292 0 6 1839 273 383 23 15 chrX 164385262 164385392 -2264904 + MamRep605 Unknown Unknown 493 623 -253 6 1839 254 273 78 14 chrX 164385728 164385869 -2264427 + RMER17A2 LTR ERVK 244 393 -513 6 1839 338 61 0 20 chrX 164385896 164385946 -2264350 + (TA)n Simple_repeat Simple_repeat 1 49 0 6 1839 527 257 20 27 chrX 164386144 164386292 -2264004 - B1_Mur1 SINE Alu 0 149 3 6 1839 4099 56 2 11 chrX 164387231 164387754 -2262542 - L1Md_F2 LINE L1 0 6582 6065 6 1839 342 0 0 0 chrX 164388169 164388207 -2262089 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 6 1839 270 317 148 23 chrX 164388465 164388656 -2261640 - MIR SINE MIR 0 262 55 6 1839 1113 223 156 7 chrX 164388786 164389088 -2261208 + ORR1D1 LTR MaLR 28 374 0 6 1839 1077 280 80 90 chrX 164389179 164389478 -2260818 + MER90 LTR ERV1 1 320 -255 6 1839 1357 64 5 31 chrX 164389478 164389672 -2260624 + L1_Mus1 LINE L1 6378 6566 -1 6 1839 1077 280 80 90 chrX 164389672 164389925 -2260371 + MER90 LTR ERV1 321 547 -28 6 1839 186 43 0 0 chrX 164390011 164390034 -2260262 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 1839 608 345 44 0 chrX 164390317 164390523 -2259773 + ID_B1 SINE B4 3 217 -7 6 1839 352 335 108 12 chrX 164390567 164390733 -2259563 + B3A SINE B2 1 182 -16 6 1839 429 20 0 0 chrX 164391537 164391587 -2258709 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1839 581 306 118 41 chrX 164391971 164392216 -2258080 + B4A SINE B4 1 264 -28 6 1839 1281 244 102 27 chrX 164392585 164392741 -2257555 + ORR1D1 LTR MaLR 4 165 -209 6 1839 495 0 0 0 chrX 164392741 164392796 -2257500 + (TC)n Simple_repeat Simple_repeat 1 55 0 6 1839 1281 244 102 27 chrX 164392796 164392972 -2257324 + ORR1D1 LTR MaLR 166 360 -14 6 1839 1177 197 48 22 chrX 164392972 164393335 -2256961 + RLTR20A2 LTR ERVK 1 439 -102 7 1839 381 22 0 0 chrX 164393336 164393382 -2256914 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1839 460 302 0 0 chrX 164393991 164394097 -2256199 - B1F SINE Alu -1 148 43 7 1839 279 0 0 0 chrX 164395809 164395840 -2254456 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1839 1376 275 52 6 chrX 164395906 164396253 -2254043 - MTE2b LTR MaLR -16 363 1 7 1839 194 151 0 36 chrX 164396265 164396320 -2253976 + (TGGG)n Simple_repeat Simple_repeat 3 55 0 7 1839 467 339 118 58 chrX 164396350 164396663 -2253633 + ORR1E LTR MaLR 22 353 -6 7 1839 267 79 0 0 chrX 164396665 164396703 -2253593 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1839 839 224 52 43 chrX 164397096 164397306 -2252990 + B3 SINE B2 2 213 -3 7 1839 198 0 0 0 chrX 164397429 164397451 -2252845 + (CA)n Simple_repeat Simple_repeat 2 23 0 7 1839 376 288 115 6 chrX 164397834 164397991 -2252305 + MamRep434 DNA TcMar 117 290 -136 7 1839 641 302 129 42 chrX 164398636 164398899 -2251397 - B4A SINE B4 -2 290 5 7 1839 35 41 0 0 chrX 164398972 164399021 -2251275 + AT_rich Low_complexity Low_complexity 1 49 0 7 1839 256 293 104 112 chrX 164399345 164399614 -2250682 + L1MA4 LINE L1 5657 5923 -377 7 1839 22 0 0 0 chrX 164400236 164400258 -2250038 + AT_rich Low_complexity Low_complexity 1 22 0 7 1839 247 287 119 0 chrX 164400728 164400829 -2249467 + RMER12 LTR ERVK 729 841 -481 7 1839 348 24 0 0 chrX 164400837 164400878 -2249418 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1839 528 16 0 0 chrX 164400878 164400938 -2249358 + (GA)n Simple_repeat Simple_repeat 2 62 0 7 1839 365 253 23 40 chrX 164401063 164401240 -2249056 + RMER17C LTR ERVK 101 274 -136 7 1839 217 347 20 0 chrX 164401580 164401678 -2248618 - MIR SINE MIR -56 206 107 7 1839 206 229 21 0 chrX 164402428 164402476 -2247820 + CT-rich Low_complexity Low_complexity 4 52 0 7 1839 363 291 18 113 chrX 164402492 164402641 -2247655 - B1F1 SINE Alu 0 149 2 7 1839 492 300 211 16 chrX 164402681 164402999 -2247297 - LTR16C LTR ERVL -4 485 106 7 1839 540 0 0 0 chrX 164403040 164403100 -2247196 + (TAGA)n Simple_repeat Simple_repeat 4 63 0 7 1839 25 0 0 0 chrX 164403565 164403590 -2246706 + AT_rich Low_complexity Low_complexity 1 25 0 7 1839 219 69 0 0 chrX 164404569 164404598 -2245698 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1839 450 0 0 0 chrX 164405088 164405138 -2245158 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1839 424 196 106 21 chrX 164405147 164405288 -2245008 - MER33 DNA MER1_type -6 318 166 7 1839 1609 256 99 7 chrX 164405295 164405782 -2244514 - MER34 LTR ERV1 -3 568 4 7 1839 244 312 84 0 chrX 164405808 164405913 -2244383 - MER33 DNA MER1_type -98 111 2 7 1839 311 258 0 0 chrX 164405944 164406006 -2244290 + B4A SINE B4 1 62 -230 7 1839 403 323 41 47 chrX 164407141 164407313 -2242983 + Arthur1A DNA Tip100 6 176 -1 7 1839 26 0 0 0 chrX 164407313 164407339 -2242957 + AT_rich Low_complexity Low_complexity 1 26 0 7 1839 518 265 53 0 chrX 164407396 164407528 -2242768 + B1_Mur2 SINE Alu 4 142 -7 7 1839 216 191 18 62 chrX 164407542 164407654 -2242642 + GA-rich Low_complexity Low_complexity 2 108 0 7 1839 473 104 13 0 chrX 164408853 164408930 -2241366 + (CATA)n Simple_repeat Simple_repeat 1 78 0 7 1839 342 78 20 0 chrX 164408931 164408982 -2241314 + HAL1-3A_ME LINE L1 1976 2027 -831 7 1839 237 346 78 35 chrX 164408983 164409124 -2241172 + MER5A DNA MER1_type 19 165 -24 7 1839 221 222 56 0 chrX 164409193 164409265 -2241031 + CT-rich Low_complexity Low_complexity 3 78 0 7 1839 472 323 24 0 chrX 164409266 164409393 -2240903 - ID_B1 SINE B4 -7 217 88 7 1839 299 283 21 21 chrX 164410124 164410218 -2240078 + CT-rich Low_complexity Low_complexity 2 95 0 7 1839 1589 88 8 20 chrX 164410482 164410726 -2239570 - L1_Mus2 LINE L1 0 6566 6326 7 1839 267 229 14 78 chrX 164410735 164410877 -2239419 - L1MC4a LINE L1 -36 7846 7714 7 1839 13313 138 39 94 chrX 164411466 164413186 -2237110 + L1_Mus1 LINE L1 413 2023 -3857 7 1839 8206 38 5 0 chrX 164413186 164414176 -2236120 + L1Md_F2 LINE L1 5588 6582 0 7 1839 13313 177 60 110 chrX 164414176 164418969 -2231327 + L1_Mus1 LINE L1 2024 6566 -1 7 1839 332 190 0 0 chrX 164418984 164419042 -2231254 + B1_Mur2 SINE Alu 43 100 -49 7 1839 180 0 0 0 chrX 164419282 164419302 -2230994 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1839 421 267 0 45 chrX 164419305 164419415 -2230881 - MER20 DNA MER1_type -85 134 30 7 1839 31 0 0 0 chrX 164419802 164419833 -2230463 + AT_rich Low_complexity Low_complexity 1 31 0 7 1839 243 0 0 0 chrX 164420466 164420493 -2229803 + (A)n Simple_repeat Simple_repeat 1 27 0 7 1839 260 301 71 12 chrX 164420521 164420605 -2229691 + ID_B1 SINE B4 4 92 -132 7 1839 562 315 93 11 chrX 164422127 164422310 -2227986 + ID_B1 SINE B4 2 199 -25 7 1839 180 200 0 0 chrX 164423149 164423189 -2227107 + (TTG)n Simple_repeat Simple_repeat 2 41 0 7 1839 216 323 15 0 chrX 164423201 164423266 -2227030 + MER5B DNA MER1_type 53 118 -60 7 1839 363 44 0 0 chrX 164424170 164424215 -2226081 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 7 1839 1229 238 124 27 chrX 164424238 164424610 -2225686 + Lx5 LINE L1 6643 7050 0 7 1839 485 322 7 7 chrX 164424695 164424839 -2225457 + B4A SINE B4 6 149 -143 7 1839 2387 42 0 0 chrX 164424852 164425139 -2225157 - L1Md_T LINE L1 -1 6581 6295 7 1839 977 0 0 0 chrX 164425139 164425255 -2225041 + L1_Mm LINE L1 5297 5412 -471 7 1839 238 232 17 147 chrX 164425255 164425371 -2224925 + B1_Mur1 SINE Alu 28 128 -21 7 1839 322 305 21 21 chrX 164425279 164425376 -2224920 + B4A SINE B4 135 231 -61 7 1839 1383 234 101 16 chrX 164426601 164426987 -2223309 - MTD LTR MaLR 0 419 1 7 1839 383 118 13 0 chrX 164427828 164427904 -2222392 + L1Md_F2 LINE L1 6506 6582 0 7 1839 23 0 0 0 chrX 164428561 164428584 -2221712 + AT_rich Low_complexity Low_complexity 1 23 0 7 1839 381 325 76 5 chrX 164428617 164428815 -2221481 - ID_B1 SINE B4 -8 216 5 7 1839 230 377 32 26 chrX 164429350 164429505 -2220791 - MIRb SINE MIR -37 231 76 7 1839 346 232 12 47 chrX 164429518 164429604 -2220692 - MER58C DNA MER1_type 0 215 133 7 1839 303 28 0 0 chrX 164429624 164429660 -2220636 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1839 658 226 48 8 chrX 164429995 164430120 -2220176 + B1_Mur1 SINE Alu 7 136 -13 7 1839 447 19 0 0 chrX 164430120 164430172 -2220124 + (TAAA)n Simple_repeat Simple_repeat 4 55 0 7 1839 317 131 32 16 chrX 164430356 164430418 -2219878 + MTEa LTR MaLR 20 82 -297 7 1839 1090 204 14 18 chrX 164430426 164430646 -2219650 - URR1B DNA MER1_type 0 225 7 7 1839 861 256 0 0 chrX 164430639 164430799 -2219497 + MTEa LTR MaLR 85 244 -135 7 1839 469 285 88 0 chrX 164431536 164431673 -2218623 - B1F SINE Alu 0 149 1 7 1839 477 0 0 0 chrX 164431817 164431870 -2218426 + (GA)n Simple_repeat Simple_repeat 2 54 0 7 1839 867 283 50 27 chrX 164432747 164433045 -2217251 - ORR1D2 LTR MaLR -65 305 1 7 1839 784 282 39 0 chrX 164433285 164433466 -2216830 + MTEa LTR MaLR 3 190 -189 7 1839 379 277 226 0 chrX 164434163 164434318 -2215978 + MTEa LTR MaLR 183 372 -7 7 1839 420 324 83 22 chrX 164434726 164434906 -2215390 + B4A SINE B4 11 201 -91 7 1839 713 274 65 55 chrX 164434958 164435251 -2215045 + Lx6 LINE L1 7139 7434 -26 7 1839 201 171 0 0 chrX 164435253 164435288 -2215008 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 7 1839 867 234 19 24 chrX 164435714 164435920 -2214376 - ID_B1 SINE B4 -15 209 5 7 1839 274 23 47 0 chrX 164436239 164436282 -2214014 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 7 1839 317 282 242 0 chrX 164436297 164436421 -2213875 + RSINE1 SINE B4 3 156 -9 7 1839 519 45 0 0 chrX 164436425 164436491 -2213805 + (CA)n Simple_repeat Simple_repeat 2 67 0 7 1839 423 0 0 0 chrX 164436497 164436544 -2213752 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 7 1839 1558 136 4 55 chrX 164436580 164436853 -2213443 - Lx3A LINE L1 -2 6979 6721 7 1839 761 175 0 0 chrX 164436949 164437075 -2213221 - B1_Mur4 SINE Alu 0 150 25 7 1839 758 71 24 0 chrX 164437102 164437229 -2213067 + L1_Mus3 LINE L1 6507 6636 -2 7 1839 485 32 0 16 chrX 164437594 164437658 -2212638 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 7 1839 387 0 0 0 chrX 164438520 164438563 -2211733 + (TC)n Simple_repeat Simple_repeat 2 44 0 7 1839 402 21 0 0 chrX 164438563 164438609 -2211687 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1839 1026 281 84 38 chrX 164438609 164438956 -2211340 - ORR1D2 LTR MaLR -5 365 3 7 1839 288 0 0 0 chrX 164438958 164438990 -2211306 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 1839 603 345 75 53 chrX 164438993 164439259 -2211037 - B4A SINE B4 -20 272 1 7 1839 805 259 10 5 chrX 164439615 164439821 -2210475 - B3 SINE B2 -8 208 2 7 1839 349 328 53 9 chrX 164439840 164439954 -2210342 - LTR16A1 LTR ERVL -160 296 178 7 1839 273 119 0 0 chrX 164440253 164440295 -2210001 + (TTGG)n Simple_repeat Simple_repeat 3 44 0 7 1839 595 214 8 38 chrX 164440298 164440429 -2209867 - B1_Mur1 SINE Alu -1 148 22 7 1839 929 271 64 67 chrX 164440765 164441078 -2209218 + ORR1E LTR MaLR 10 321 -38 7 1839 1139 62 0 20 chrX 164441078 164441225 -2209071 + B1_Mm SINE Alu 2 145 -2 7 1839 398 347 63 87 chrX 164441225 164441277 -2209019 + ORR1E LTR MaLR 328 366 -18 7 1839 492 18 0 0 chrX 164441479 164441536 -2208760 + (TTTAG)n Simple_repeat Simple_repeat 5 61 0 7 1839 459 307 26 0 chrX 164441551 164441665 -2208631 - B1_Mur1 SINE Alu -27 122 6 7 1839 328 256 11 75 chrX 164441590 164441683 -2208613 - MT2B LTR ERVL -363 238 152 7 1839 403 202 0 40 chrX 164442030 164442137 -2208159 + ID4_ SINE ID 9 107 -45 8 1839 310 321 0 0 chrX 164442479 164442560 -2207736 - B1F1 SINE Alu -33 116 36 8 1839 414 57 0 0 chrX 164443517 164443570 -2206726 + (TA)n Simple_repeat Simple_repeat 1 53 0 8 1839 774 32 0 0 chrX 164443571 164443664 -2206632 + (GA)n Simple_repeat Simple_repeat 2 94 0 8 1839 329 310 10 0 chrX 164444182 164444282 -2206014 + MER20 DNA MER1_type 118 218 -1 8 1839 458 269 81 27 chrX 164446482 164446631 -2203665 - RSINE1 SINE B4 -6 159 3 8 1839 461 279 24 45 chrX 164446677 164446989 -2203307 - L1MA4 LINE L1 -370 5921 5644 8 1839 281 26 0 26 chrX 164447062 164447101 -2203195 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 8 1839 1106 92 12 0 chrX 164447244 164447408 -2202888 + (TTTC)n Simple_repeat Simple_repeat 4 169 0 8 1839 342 225 0 0 chrX 164447410 164447490 -2202806 + CT-rich Low_complexity Low_complexity 3 82 0 8 1839 231 114 0 0 chrX 164447502 164447537 -2202759 + (TC)n Simple_repeat Simple_repeat 2 36 0 8 1839 243 306 86 93 chrX 164447550 164447576 -2202720 - ID_B1 SINE B4 -72 152 3 8 1839 793 152 24 0 chrX 164447576 164447701 -2202595 - B2_Mm2 SINE B2 -65 130 3 8 1839 3955 53 4 0 chrX 164447715 164448209 -2202087 - L1Md_F3 LINE L1 0 6584 6089 8 1839 242 284 113 38 chrX 164450662 164450768 -2199528 - MER58B DNA MER1_type 0 341 228 8 1839 288 298 134 24 chrX 164451099 164451120 -2199176 + ID_B1 SINE B4 64 204 -20 8 1839 437 245 189 0 chrX 164451120 164451226 -2199070 + B1F SINE Alu 4 129 -20 8 1839 533 319 51 37 chrX 164451266 164451481 -2198815 + MLT1A LTR MaLR 156 373 -1 8 1839 1050 246 78 34 chrX 164451909 164452115 -2198181 - MTD LTR MaLR 0 419 212 8 1839 216 67 0 0 chrX 164452115 164452145 -2198151 + (TTG)n Simple_repeat Simple_repeat 3 32 0 8 1839 1050 246 78 34 chrX 164452145 164452233 -2198063 - MTD LTR MaLR -208 211 113 8 1839 882 259 0 24 chrX 164452234 164452440 -2197856 + B3 SINE B2 2 202 -14 8 1839 3288 137 196 11 chrX 164452485 164453106 -2197190 + RMER19A LTR ERVK 1 736 -1 8 1839 297 51 0 0 chrX 164453166 164453205 -2197091 + (TA)n Simple_repeat Simple_repeat 2 40 0 8 1839 707 284 99 40 chrX 164453496 164453526 -2196770 + B4 SINE B4 1 30 -262 8 1839 252 22 0 62 chrX 164453526 164453574 -2196722 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 8 1839 1008 28 6 169 chrX 164453574 164453746 -2196550 - B1_Mm SINE Alu -2 145 2 8 1839 707 284 99 40 chrX 164453746 164453986 -2196310 + B4 SINE B4 31 287 -5 8 1839 35 41 0 0 chrX 164454466 164454515 -2195781 + AT_rich Low_complexity Low_complexity 1 49 0 8 1839 1096 212 19 5 chrX 164454573 164454781 -2195515 - B3 SINE B2 0 216 6 8 1839 532 226 79 30 chrX 164454826 164454990 -2195306 - MER58A DNA MER1_type -8 216 45 8 1839 504 313 95 28 chrX 164456195 164456448 -2193848 + B4A SINE B4 5 274 -18 8 1839 314 230 13 63 chrX 164456509 164456588 -2193708 + HAL1-3A_ME LINE L1 1976 2050 -808 8 1839 249 335 131 42 chrX 164456614 164456782 -2193514 - MER20 DNA MER1_type -3 216 34 8 1839 271 228 18 0 chrX 164457311 164457368 -2192928 - ID_B1 SINE B4 0 224 167 8 1839 1067 245 0 0 chrX 164458226 164458434 -2191862 - B3 SINE B2 -5 211 4 8 1839 277 299 8 38 chrX 164459078 164459210 -2191086 + GA-rich Low_complexity Low_complexity 3 130 0 8 1839 255 261 109 89 chrX 164459898 164459916 -2190380 + MT2B2 LTR ERVL 136 155 -429 8 1839 641 277 7 7 chrX 164459916 164460065 -2190231 + B1F SINE Alu 1 149 0 8 1839 597 108 26 18 chrX 164460362 164460475 -2189821 + GA-rich Low_complexity Low_complexity 4 117 0 8 1839 1357 252 90 57 chrX 164460606 164460818 -2189478 + RLTR40 LTR ERVK 19 251 -566 8 1839 5818 39 21 1 chrX 164460818 164461533 -2188763 - L1Md_A LINE L1 -2 6580 5852 8 1839 1357 261 88 60 chrX 164461533 164462004 -2188292 + RLTR40 LTR ERVK 252 772 -45 8 1839 277 244 56 89 chrX 164462086 164462176 -2188120 + URR1B DNA MER1_type 2 88 -137 8 1839 2922 59 5 0 chrX 164462227 164462600 -2187696 - L1Md_F2 LINE L1 0 6582 6208 8 1839 1143 85 74 0 chrX 164462603 164462779 -2187517 - B2_Mm2 SINE B2 -6 189 1 8 1839 399 259 57 14 chrX 164463281 164463422 -2186874 + MER53 DNA hAT 47 193 0 8 1839 3577 189 68 14 chrX 164463499 164464113 -2186183 + Lx9 LINE L1 6756 7394 -250 8 1839 6140 55 3 0 chrX 164464113 164464875 -2185421 - L1Md_F2 LINE L1 -1 6581 5818 8 1839 3577 189 68 14 chrX 164464875 164464978 -2185318 + Lx9 LINE L1 7395 7516 -128 8 1839 378 0 0 0 chrX 164464978 164465020 -2185276 + (TATG)n Simple_repeat Simple_repeat 3 44 0 8 1839 3577 189 68 14 chrX 164465020 164465144 -2185152 + Lx9 LINE L1 7517 7642 -2 8 1839 706 251 128 0 chrX 164465210 164465389 -2184907 - B3 SINE B2 -13 203 2 8 1839 306 0 0 0 chrX 164466036 164466070 -2184226 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 8 1839 387 0 0 0 chrX 164467407 164467450 -2182846 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 1839 701 310 110 8 chrX 164467863 164467935 -2182361 - B4A SINE B4 -1 291 218 8 1839 273 29 0 0 chrX 164467935 164467969 -2182327 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1839 701 310 110 8 chrX 164467969 164468159 -2182137 - B4A SINE B4 -75 217 3 8 1839 421 354 89 96 chrX 164468267 164468695 -2181601 + LTR40a LTR ERVL 6 430 -32 8 1839 535 203 63 31 chrX 164468724 164468851 -2181445 + B1_Mur1 SINE Alu 18 148 -1 8 1839 210 297 0 13 chrX 164468900 164468975 -2181321 + (CATA)n Simple_repeat Simple_repeat 2 75 0 8 1839 508 281 111 0 chrX 164470633 164470786 -2179510 + MER20 DNA MER1_type 45 214 -5 8 1839 355 288 117 84 chrX 164470950 164471268 -2179028 + L1ME1 LINE L1 5477 5798 -381 8 1839 711 285 122 25 chrX 164471268 164471595 -2178701 + ORR1E LTR MaLR 1 359 0 8 1839 267 287 116 86 chrX 164471595 164471659 -2178637 + L1ME1 LINE L1 5799 5856 -323 8 1839 383 252 181 9 chrX 164471659 164471775 -2178521 + B1F SINE Alu 2 137 -12 8 1839 300 53 0 0 chrX 164471775 164471813 -2178483 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 8 1839 267 287 116 86 chrX 164471813 164471937 -2178359 + L1ME1 LINE L1 5857 5996 -183 8 1839 480 258 94 0 chrX 164472593 164472721 -2177575 + RSINE1 SINE B4 5 144 -21 8 1839 293 206 0 10 chrX 164472723 164472821 -2177475 + CT-rich Low_complexity Low_complexity 2 98 0 8 1839 2167 194 108 35 chrX 164472891 164472922 -2177374 + Lx9 LINE L1 5182 5210 -637 8 1839 342 67 0 0 chrX 164472922 164472967 -2177329 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 1839 2167 248 98 41 chrX 164472967 164473898 -2176398 + Lx9 LINE L1 5211 6221 -1252 8 1839 387 105 0 0 chrX 164473898 164473955 -2176341 + (TA)n Simple_repeat Simple_repeat 2 58 0 8 1839 1622 194 82 40 chrX 164473955 164474335 -2175961 + Lx9 LINE L1 6364 6759 -885 8 1839 334 299 44 53 chrX 164474529 164474642 -2175654 + ID_B1 SINE B4 82 193 -31 8 1839 922 230 9 23 chrX 164474744 164474962 -2175334 + B3 SINE B2 2 216 0 8 1839 221 30 61 0 chrX 164475241 164475274 -2175022 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 1839 4790 134 16 3 chrX 164475391 164476118 -2174178 + RMER19A LTR ERVK 1 737 0 8 1839 32 43 0 0 chrX 164476129 164476175 -2174121 + AT_rich Low_complexity Low_complexity 1 46 0 8 1839 5159 78 3 7 chrX 164476179 164476874 -2173422 - L1_Mus1 LINE L1 0 6567 5876 8 1839 4571 42 0 0 chrX 164476878 164477425 -2172871 - L1Md_T LINE L1 0 6582 6036 8 1839 424 65 2 0 chrX 164477425 164477484 -2172812 - L1_Mus1 LINE L1 -748 5888 5829 8 1839 479 314 40 11 chrX 164477551 164477725 -2172571 + B3 SINE B2 26 204 -12 8 1839 22 0 0 0 chrX 164477725 164477747 -2172549 + AT_rich Low_complexity Low_complexity 1 22 0 8 1839 506 246 115 0 chrX 164477785 164477907 -2172389 + B1_Mur1 SINE Alu 7 142 -7 8 1839 650 230 7 36 chrX 164478614 164478754 -2171542 + ID_B1 SINE B4 80 215 -9 8 1839 189 208 0 0 chrX 164478754 164478826 -2171470 + CT-rich Low_complexity Low_complexity 2 73 0 8 1839 613 251 133 114 chrX 164480042 164480230 -2170066 - MTE2a LTR MaLR 0 379 158 8 1839 189 0 0 0 chrX 164480230 164480251 -2170045 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 1839 573 15 0 0 chrX 164480251 164480316 -2169980 + (GA)n Simple_repeat Simple_repeat 2 67 0 8 1839 613 251 133 114 chrX 164480316 164480494 -2169802 - MTE2a LTR MaLR -222 157 6 8 1839 283 307 95 51 chrX 164480695 164480853 -2169443 + RSINE1 SINE B4 1 165 0 8 1839 222 37 0 0 chrX 164480977 164481004 -2169292 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 1839 1156 265 119 29 chrX 164481160 164481746 -2168550 + Lx8 LINE L1 6819 7457 -16 8 1839 1534 129 62 71 chrX 164482870 164483195 -2167101 - RLTRETN_Mm LTR ERVK 0 322 1 8 1839 638 268 145 0 chrX 164483258 164483437 -2166859 - B3 SINE B2 -10 206 2 8 1839 468 291 49 14 chrX 164483447 164483590 -2166706 - B1_Mur2 SINE Alu 0 149 2 8 1839 637 220 144 0 chrX 164485183 164485324 -2164972 - B3A SINE B2 -57 159 1 8 1839 412 269 91 65 chrX 164485386 164485563 -2164733 - Tigger5 DNA MER2_type 0 2406 2218 8 1839 31 26 0 0 chrX 164485802 164485840 -2164456 + AT_rich Low_complexity Low_complexity 1 38 0 8 1839 434 262 62 34 chrX 164486649 164486795 -2163501 - RSINE1 SINE B4 -14 151 2 8 1839 4623 120 54 35 chrX 164486882 164487676 -2162620 + RMER17D2 LTR ERVK 1 809 0 8 1839 1393 217 44 26 chrX 164487923 164488260 -2162036 + ORR1D1 LTR MaLR 1 320 -58 8 1839 1398 73 0 38 chrX 164488260 164488473 -2161823 - L1_Mus2 LINE L1 0 6566 6362 8 1839 1204 238 32 101 chrX 164488473 164488541 -2161755 + ORR1D1 LTR MaLR 321 378 0 8 1839 196 30 29 29 chrX 164488972 164489006 -2161290 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 1839 796 133 249 0 chrX 164489278 164489451 -2160845 + B3 SINE B2 1 216 0 8 1839 245 312 191 33 chrX 164489984 164490199 -2160097 - MIRb SINE MIR -15 253 5 8 1839 240 333 162 29 chrX 164491875 164492011 -2158285 - MER20 DNA MER1_type -35 184 31 8 1839 21 57 0 0 chrX 164492378 164492413 -2157883 + AT_rich Low_complexity Low_complexity 1 35 0 8 1839 236 192 0 0 chrX 164493139 164493191 -2157105 + (TA)n Simple_repeat Simple_repeat 2 53 0 8 1839 961 240 10 5 chrX 164494322 164494527 -2155769 + B3 SINE B2 1 206 -10 8 1840 474 369 5 27 chrX 164495617 164495647 -2154649 - B3A SINE B2 -1 197 168 9 1840 405 0 0 0 chrX 164495647 164495692 -2154604 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1840 474 369 5 27 chrX 164495692 164495845 -2154451 - B3A SINE B2 -31 167 19 9 1840 468 312 13 6 chrX 164495944 164496102 -2154194 - RSINE1 SINE B4 -2 163 5 9 1840 655 242 119 19 chrX 164496120 164496389 -2153907 + LTR37A LTR ERV1 122 417 -9 9 1840 549 0 0 0 chrX 164497806 164497867 -2152429 + (CAAAA)n Simple_repeat Simple_repeat 2 62 0 9 1840 822 248 39 5 chrX 164498162 164498365 -2151931 + B3 SINE B2 1 210 -6 9 1840 260 256 20 212 chrX 164498782 164498894 -2151402 + MER5A1 DNA MER1_type 1 89 -77 9 1840 309 89 0 0 chrX 164498894 164498939 -2151357 + (CA)n Simple_repeat Simple_repeat 1 45 0 9 1840 260 256 20 212 chrX 164498939 164499029 -2151267 + MER5A1 DNA MER1_type 90 164 -2 9 1840 234 105 0 0 chrX 164499765 164499803 -2150493 + (TGGGGG)n Simple_repeat Simple_repeat 3 40 0 9 1840 642 308 19 0 chrX 164500007 164500166 -2150130 + B3 SINE B2 48 209 -7 1 1840 828 195 168 0 chrX 164500494 164500534 -2149762 - B3 SINE B2 0 216 167 2 1840 642 60 0 0 chrX 164500534 164500617 -2149679 + (TG)n Simple_repeat Simple_repeat 2 84 0 3 1840 828 195 168 0 chrX 164500617 164500761 -2149535 - B3 SINE B2 -50 166 2 2 1840 4454 134 54 0 chrX 164501751 164502454 -2147842 - Lx2B LINE L1 -14 6986 6246 4 1840 4451 132 14 4 chrX 164502454 164503240 -2147056 + Lx2B LINE L1 5494 6284 -716 4 1840 221 0 0 33 chrX 164503808 164503838 -2146458 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1840 1057 94 0 0 chrX 164503838 164503976 -2146320 - B1_Mus1 SINE Alu -10 138 1 6 1840 513 0 0 0 chrX 164504103 164504160 -2146136 + (CAAAA)n Simple_repeat Simple_repeat 4 60 0 7 1840 210 125 0 48 chrX 164505066 164505108 -2145188 + T-rich Low_complexity Low_complexity 1 40 0 8 1840 209 109 0 21 chrX 164505182 164505229 -2145067 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 9 1840 480 324 31 86 chrX 164505602 164505764 -2144532 + RSINE1 SINE B4 6 158 -7 1 1840 27 29 0 0 chrX 164505770 164505804 -2144492 + AT_rich Low_complexity Low_complexity 1 34 0 1 1840 269 305 107 60 chrX 164505805 164505955 -2144341 + LTR82B Low_complexity ERVL 240 396 -434 1 1840 2162 180 156 2 chrX 164506152 164506614 -2143682 - MT2A LTR ERVL 0 533 1 1 1840 1463 211 43 19 chrX 164507063 164507428 -2142868 + MTD LTR MaLR 5 398 -2 1 1840 642 275 97 63 chrX 164507586 164507834 -2142462 + B4 SINE B4 12 270 -22 1 1840 359 21 0 20 chrX 164507834 164507883 -2142413 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1840 297 0 0 0 chrX 164507883 164507915 -2142381 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 1840 642 275 97 63 chrX 164507915 164507933 -2142363 + B4 SINE B4 271 287 -5 1 1840 428 301 24 16 chrX 164507976 164508101 -2142195 + MER5A DNA MER1_type 61 186 -3 1 1840 2107 271 89 25 chrX 164508659 164509580 -2140716 - L1MC1 LINE L1 -1 6332 5353 1 1840 472 293 8 16 chrX 164509626 164509751 -2140545 - RSINE1 SINE B4 -36 129 6 2 1840 1369 245 113 60 chrX 164509757 164510143 -2140153 - L1MC1 LINE L1 -2424 5361 5002 1 1840 687 224 28 7 chrX 164510143 164510287 -2140009 - B1_Mur1 SINE Alu -1 148 2 2 1840 1369 245 131 81 chrX 164510287 164510771 -2139525 - L1MC1 LINE L1 -1145 5001 4445 1 1840 60 59 0 0 chrX 164510789 164510891 -2139405 + AT_rich Low_complexity Low_complexity 1 102 0 2 1840 192 135 65 33 chrX 164510911 164511064 -2139232 + (TA)n Simple_repeat Simple_repeat 2 159 0 2 1840 702 297 75 8 chrX 164511384 164511767 -2138529 - L1MC1 LINE L1 -2136 4010 3601 1 1840 444 24 23 47 chrX 164512870 164512956 -2137340 + (GTGTG)n Simple_repeat Simple_repeat 2 85 0 2 1840 685 230 7 0 chrX 164513076 164513215 -2137081 + B1_Mur1 SINE Alu 2 141 -8 2 1840 919 278 10 37 chrX 164513250 164513549 -2136747 + B4A SINE B4 2 292 0 2 1840 661 204 27 34 chrX 164514658 164514805 -2135491 - B1_Mur1 SINE Alu -3 146 1 2 1840 207 0 0 0 chrX 164514810 164514833 -2135463 + (T)n Simple_repeat Simple_repeat 1 23 0 2 1840 1112 88 0 0 chrX 164514833 164514981 -2135315 - B1_Mus1 SINE Alu 0 148 1 2 1840 291 191 0 0 chrX 164515041 164515088 -2135208 - RSINE1 SINE B4 -115 50 4 3 1840 697 74 41 0 chrX 164515277 164515399 -2134897 + (TC)n Simple_repeat Simple_repeat 2 128 0 3 1840 511 287 0 0 chrX 164515663 164515771 -2134525 - B1F2 SINE Alu -31 118 11 3 1840 1182 62 0 0 chrX 164515780 164515926 -2134370 - B1_Mus1 SINE Alu 0 148 3 3 1840 248 316 26 0 chrX 164516516 164516592 -2133704 + ID4 SINE ID 2 79 -4 3 1840 224 333 56 0 chrX 164517191 164517263 -2133033 + B4A SINE B4 4 79 -213 3 1840 585 275 43 81 chrX 164517282 164517492 -2132804 + B3 SINE B2 2 203 -13 3 1840 342 0 0 0 chrX 164517545 164517583 -2132713 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1840 439 302 35 0 chrX 164517614 164517730 -2132566 + B4 SINE B4 107 226 -66 3 1840 4669 230 81 47 chrX 164518377 164520071 -2130225 + Lx9 LINE L1 5785 7639 -5 3 1840 6263 60 6 14 chrX 164520313 164521123 -2129173 - L1_Mus1 LINE L1 0 6567 5764 3 1840 202 282 117 43 chrX 164521132 164521295 -2129001 - L3 LINE CR1 -242 4247 4073 4 1840 212 318 32 0 chrX 164521342 164521405 -2128891 + ID SINE ID 2 66 -158 4 1840 241 180 0 20 chrX 164521411 164521462 -2128834 + (CAT)n Simple_repeat Simple_repeat 2 51 0 4 1840 252 0 0 0 chrX 164522126 164522154 -2128142 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 4 1840 279 325 33 25 chrX 164522388 164522508 -2127788 + MLT1H2 LTR MaLR 365 485 -4 4 1840 694 261 237 24 chrX 164522657 164522941 -2127355 - MTEa LTR MaLR 0 379 35 4 1840 1088 151 102 5 chrX 164522941 164523147 -2127149 + URR1A DNA MER1_type 1 226 0 4 1840 695 316 49 34 chrX 164523642 164523907 -2126389 - MLT1A0 LTR MaLR -22 343 75 4 1840 268 325 48 30 chrX 164524302 164524467 -2125829 + Tigger15a DNA TcMar 438 605 -110 4 1840 785 266 29 19 chrX 164524471 164524678 -2125618 + B3 SINE B2 1 209 -7 4 1840 237 33 0 0 chrX 164524681 164524711 -2125585 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1840 640 203 85 21 chrX 164524715 164524856 -2125440 - B1_Mur4 SINE Alu 0 150 1 5 1840 206 246 0 122 chrX 164526082 164526156 -2124140 + MER5B DNA MER1_type 23 87 -91 5 1840 378 325 96 0 chrX 164526171 164526337 -2123959 + MER63A DNA AcHobo 19 200 -10 5 1840 191 329 14 14 chrX 164526348 164526419 -2123877 - MER5B DNA MER1_type -104 74 4 5 1840 1064 196 14 9 chrX 164526475 164526686 -2123610 + B3 SINE B2 2 213 -3 5 1840 299 293 213 32 chrX 164526692 164526847 -2123449 - MER5A DNA MER1_type -5 184 2 5 1840 307 211 35 0 chrX 164527173 164527230 -2123066 + B1_Mus1 SINE Alu 3 61 -87 5 1840 236 300 0 41 chrX 164527269 164527342 -2122954 + MER58B DNA MER1_type 269 338 -3 5 1840 869 121 36 6 chrX 164527871 164528038 -2122258 + CT-rich Low_complexity Low_complexity 4 175 0 5 1840 854 164 85 30 chrX 164528639 164528803 -2121493 - MTC LTR MaLR -53 368 196 6 1840 315 333 113 0 chrX 164528827 164528968 -2121328 - L1MEd LINE L1 -4941 1178 1022 6 1840 3788 69 14 4 chrX 164528969 164529479 -2120817 - L1_Mus3 LINE L1 -6 6632 6118 6 1840 3999 63 2 14 chrX 164529480 164530039 -2120257 + MusHAL1 LINE L1 1654 2205 -507 6 1840 1344 118 64 34 chrX 164530039 164530275 -2120021 - Lx LINE L1 -15 6639 6397 6 1840 252 0 0 0 chrX 164530279 164530307 -2119989 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 6 1840 305 302 0 65 chrX 164530311 164530403 -2119893 - PB1 SINE Alu -21 106 21 6 1840 294 292 79 21 chrX 164530574 164530682 -2119614 + MER5A DNA MER1_type 4 118 -71 6 1840 920 133 0 6 chrX 164530682 164530863 -2119433 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 1840 294 292 79 21 chrX 164530863 164530894 -2119402 + MER5A DNA MER1_type 119 150 -39 6 1840 396 0 0 0 chrX 164531185 164531229 -2119067 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1840 893 48 86 16 chrX 164531998 164532126 -2118170 + B1_Mm SINE Alu 10 146 -1 7 1840 204 205 0 25 chrX 164532562 164532602 -2117694 + polypurine Low_complexity Low_complexity 1 39 0 7 1840 417 296 92 27 chrX 164533355 164533539 -2116757 + Kanga1a DNA Tc2 218 413 -341 7 1840 927 273 60 36 chrX 164533637 164533918 -2116378 + B4 SINE B4 1 288 -4 7 1840 781 307 5 35 chrX 164534454 164534653 -2115643 - ID_B1 SINE B4 -21 203 11 7 1840 503 275 9 0 chrX 164534822 164534931 -2115365 + B1F2 SINE Alu 40 149 0 7 1840 714 305 30 5 chrX 164535360 164535558 -2114738 + B3 SINE B2 5 207 -9 7 1840 534 70 0 0 chrX 164536345 164536416 -2113880 + (TTCC)n Simple_repeat Simple_repeat 3 73 0 7 1840 316 333 11 0 chrX 164536824 164536911 -2113385 + B4 SINE B4 26 113 -179 7 1840 1191 112 0 0 chrX 164536912 164537091 -2113205 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 7 1840 1195 89 6 6 chrX 164537989 164538169 -2112127 + (TTC)n Simple_repeat Simple_repeat 1 180 0 8 1840 381 102 0 0 chrX 164538169 164538228 -2112068 + (TCC)n Simple_repeat Simple_repeat 3 61 0 8 1840 209 344 68 53 chrX 164538740 164538872 -2111424 + MIRb SINE MIR 103 236 -32 8 1840 351 232 50 62 chrX 164539571 164539661 -2110635 + RMER17A LTR ERVK 335 419 -332 8 1840 402 314 23 81 chrX 164539661 164539834 -2110462 - RSINE1 SINE B4 0 165 3 8 1840 351 232 50 62 chrX 164539834 164539899 -2110397 + RMER17A LTR ERVK 420 487 -264 8 1840 1596 299 28 56 chrX 164539899 164540469 -2109827 + Tigger9b DNA MER2_type 1 554 -70 8 1840 777 284 24 0 chrX 164540889 164541097 -2109199 + B3 SINE B2 3 215 -1 8 1840 493 295 50 0 chrX 164541594 164541733 -2108563 - B1F2 SINE Alu 0 149 4 8 1840 211 216 0 0 chrX 164541830 164541867 -2108429 + (TATG)n Simple_repeat Simple_repeat 2 38 0 8 1840 717 209 209 0 chrX 164541919 164542106 -2108190 - URR1A DNA MER1_type 0 226 1 8 1840 832 245 9 19 chrX 164542197 164542409 -2107887 - B3 SINE B2 -6 210 1 9 1840 216 266 172 0 chrX 164542532 164542596 -2107700 - B4A SINE B4 -217 75 1 9 1840 264 30 0 0 chrX 164542772 164542805 -2107491 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 1840 272 264 117 32 chrX 164543276 164543370 -2106926 + MLT1L LTR MaLR 12 113 -497 9 1840 378 0 0 0 chrX 164543795 164543837 -2106459 + (TAAAA)n Simple_repeat Simple_repeat 3 44 0 9 1840 420 37 0 0 chrX 164545282 164545336 -2104960 + (TG)n Simple_repeat Simple_repeat 2 55 0 9 1840 360 0 0 0 chrX 164545632 164545672 -2104624 + (CA)n Simple_repeat Simple_repeat 2 41 0 9 1840 608 249 124 54 chrX 164545685 164545927 -2104369 - MER58B DNA MER1_type -35 306 48 9 1840 499 29 29 0 chrX 164546114 164546183 -2104113 + (GAAAA)n Simple_repeat Simple_repeat 5 75 0 9 1840 255 169 47 37 chrX 164546186 164546253 -2104043 + PB1D7 SINE Alu 48 120 0 9 1840 186 150 0 0 chrX 164546266 164546306 -2103990 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1 1840 324 280 74 21 chrX 164546315 164546410 -2103886 + ID_B1 SINE B4 11 110 -114 1 1840 22 70 0 0 chrX 164546769 164546812 -2103484 + AT_rich Low_complexity Low_complexity 1 43 0 1 1840 482 217 8 0 chrX 164547025 164547145 -2103151 + (TATATG)n Simple_repeat Simple_repeat 5 125 0 1 1840 245 259 94 67 chrX 164547159 164547308 -2102988 - YREP_Mm Unknown Unknown -1474 338 186 1 1840 343 269 129 15 chrX 164547186 164547201 -2103095 + B1F SINE Alu 2 87 -62 1 1840 422 294 46 0 chrX 164547201 164547310 -2102986 + ID_B1 SINE B4 104 217 -7 1 1840 287 299 37 49 chrX 164547583 164547745 -2102551 - L1MC4a LINE L1 -1932 5950 5791 1 1840 26 30 0 0 chrX 164547767 164547800 -2102496 + AT_rich Low_complexity Low_complexity 1 33 0 1 1840 689 249 27 64 chrX 164548438 164548657 -2101639 - B3 SINE B2 -5 211 1 1 1840 1213 99 47 0 chrX 164548745 164548917 -2101379 + B2_Mm2 SINE B2 2 181 -14 1 1840 21 0 0 0 chrX 164549475 164549496 -2100800 + AT_rich Low_complexity Low_complexity 1 21 0 1 1840 304 304 28 120 chrX 164550129 164550178 -2100118 + RSINE1 SINE B4 1 48 -117 1 1840 1623 213 33 14 chrX 164550178 164550545 -2099751 - ORR1D1 LTR MaLR 0 374 1 1 1840 304 304 28 120 chrX 164550545 164550627 -2099669 + RSINE1 SINE B4 49 121 -44 1 1840 3197 65 0 0 chrX 164550627 164551027 -2099269 - MTB LTR MaLR 0 400 1 1 1840 558 0 0 0 chrX 164551047 164551109 -2099187 + (TC)n Simple_repeat Simple_repeat 1 62 0 1 1840 414 0 0 0 chrX 164551109 164551154 -2099142 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1840 423 326 7 0 chrX 164551353 164551491 -2098805 + B1_Mur1 SINE Alu 1 139 -10 1 1840 743 278 64 25 chrX 164551561 164551764 -2098532 + ID_B1 SINE B4 6 216 -8 1 1840 248 309 82 47 chrX 164551817 164551902 -2098394 + MLT1J1 LTR MaLR 51 138 -306 1 1840 923 85 0 8 chrX 164552040 164552170 -2098126 + B2_Mm2 SINE B2 25 153 -42 1 1840 405 0 0 0 chrX 164552170 164552215 -2098081 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1840 4813 20 0 2 chrX 164552294 164552852 -2097444 + L1Md_A LINE L1 6026 6582 0 1 1840 876 254 65 0 chrX 164553747 164553948 -2096348 - B3 SINE B2 -1 215 2 1 1840 255 31 0 0 chrX 164554330 164554362 -2095934 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 1840 1582 178 62 38 chrX 164554970 164555309 -2094987 + RMER4B LTR ERVK 1 347 -238 1 1840 695 297 139 81 chrX 164555309 164555855 -2094441 + Lx8 LINE L1 6868 7445 -28 1 1840 198 143 0 0 chrX 164555865 164555900 -2094396 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1840 971 251 143 0 chrX 164555912 164556199 -2094097 - MER58B DNA MER1_type -9 332 5 1 1840 703 269 42 5 chrX 164556256 164556469 -2093827 + ID_B1 SINE B4 1 221 -3 1 1840 731 181 71 14 chrX 164556481 164556621 -2093675 + B1_Mur1 SINE Alu 1 148 -1 1 1840 588 40 0 0 chrX 164556803 164556878 -2093418 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 1840 192 111 0 0 chrX 164558928 164558964 -2091332 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1840 435 63 0 0 chrX 164560458 164560521 -2089775 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 1840 396 0 0 0 chrX 164562294 164562338 -2087958 + (TC)n Simple_repeat Simple_repeat 1 44 0 1 1840 455 354 70 91 chrX 164562874 164563441 -2086855 + L2a LINE L2 2878 3421 -5 1 1840 713 268 13 72 chrX 164563794 164564031 -2086265 + ID_B1 SINE B4 2 224 0 1 1840 266 242 0 0 chrX 164564132 164564194 -2086102 + tRNA-Ala-GCY_ tRNA tRNA 4 65 -10 1 1840 1599 225 26 35 chrX 164565491 164565868 -2084428 + ORR1D1 LTR MaLR 1 374 0 1 1840 204 125 0 0 chrX 164565888 164565920 -2084376 + (GGA)n Simple_repeat Simple_repeat 3 34 0 1 1840 349 319 46 81 chrX 164565991 164566209 -2084087 - L2a LINE L2 -233 3193 2984 1 1840 803 262 19 5 chrX 164566233 164566440 -2083856 + B3 SINE B2 1 210 -6 1 1840 26664 76 26 2 chrX 164566459 164571231 -2079065 + L1Md_F2 LINE L1 371 5258 -625 1 1840 881 69 0 0 chrX 164571229 164571359 -2078937 - L1_Mm LINE L1 -4092 1791 1662 1 1840 631 74 0 0 chrX 164571352 164571433 -2078863 + L1Md_F2 LINE L1 5504 5584 -299 1 1840 7693 57 13 10 chrX 164571435 164572428 -2077868 + L1Md_F2 LINE L1 5587 6582 0 1 1840 1064 235 10 0 chrX 164572552 164572752 -2077544 + B3 SINE B2 9 210 -6 1 1840 992 209 59 50 chrX 164572775 164572997 -2077299 + MTD LTR MaLR 196 419 0 1 1840 295 247 32 43 chrX 164572997 164573074 -2077222 + B3 SINE B2 117 192 -24 1 1840 24 53 0 0 chrX 164573074 164573112 -2077184 + AT_rich Low_complexity Low_complexity 1 38 0 1 1840 566 271 119 10 chrX 164573154 164573348 -2076948 + B3 SINE B2 2 216 0 1 1840 690 248 7 27 chrX 164573822 164573971 -2076325 + B3 SINE B2 1 146 -70 1 1840 568 295 15 90 chrX 164573972 164574173 -2076123 - ID_B1 SINE B4 -4 220 35 1 1840 1339 256 18 16 chrX 164574190 164574516 -2075780 + MTD LTR MaLR 65 419 0 1 1840 272 364 25 0 chrX 164574842 164574963 -2075333 + L2 LINE L2 2525 2648 -771 1 1840 438 263 109 78 chrX 164574976 164575104 -2075192 + B1F2 SINE Alu 13 144 -5 1 1840 191 302 50 50 chrX 164575183 164575284 -2075012 + L2 LINE L2 2691 2791 -628 1 1840 220 293 24 0 chrX 164575724 164575806 -2074490 + T-rich Low_complexity Low_complexity 4 87 0 1 1840 23 54 0 0 chrX 164575860 164575897 -2074399 + AT_rich Low_complexity Low_complexity 1 37 0 1 1840 335 252 128 15 chrX 164575914 164576047 -2074249 - MIRc SINE MIR -16 252 105 1 1840 342 259 128 43 chrX 164576241 164576358 -2073938 + RSINE1 SINE B4 3 129 -36 1 1840 350 277 8 59 chrX 164576462 164576581 -2073715 + ID_B1 SINE B4 58 170 -54 1 1840 326 80 20 0 chrX 164577106 164577156 -2073140 + (GAAA)n Simple_repeat Simple_repeat 1 51 0 1 1840 432 294 90 20 chrX 164577796 164577997 -2072299 + B3 SINE B2 2 216 0 1 1840 375 23 0 0 chrX 164578054 164578098 -2072198 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1840 265 365 23 96 chrX 164578197 164578415 -2071881 - B4 SINE B4 -65 227 26 1 1840 1643 191 82 52 chrX 164578990 164579607 -2070689 + RLTR25A LTR ERVK 1 1103 0 1 1840 955 145 212 16 chrX 164580639 164580828 -2069468 + URR1A DNA MER1_type 1 226 0 1 1840 313 372 24 24 chrX 164582309 164582433 -2067863 - MER91B DNA Tip100 -53 137 14 1 1840 394 274 21 10 chrX 164582590 164582686 -2067610 + RMER15 LTR ERVL 431 527 -48 1 1840 199 268 3 66 chrX 164582742 164582829 -2067467 + MIRb SINE MIR 97 185 -83 1 1840 325 282 155 0 chrX 164583399 164583502 -2066794 + RSINE1 SINE B4 3 121 -44 1 1840 606 225 19 90 chrX 164583503 164583659 -2066637 + B1_Mur1 SINE Alu 2 146 -3 1 1840 405 0 0 0 chrX 164583675 164583720 -2066576 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1840 1125 228 86 18 chrX 164583729 164584068 -2066228 - Charlie1b DNA MER1_type -155 368 7 1 1840 186 133 0 0 chrX 164584371 164584401 -2065895 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1 1840 449 267 0 0 chrX 164584553 164584654 -2065642 - B3 SINE B2 -115 101 1 1 1840 6890 58 4 0 chrX 164584897 164585797 -2064499 - L1_Mus1 LINE L1 0 6567 5664 1 1840 2875 160 14 23 chrX 164585802 164586765 -2063531 + Lx5 LINE L1 5249 6288 -762 1 1840 460 250 18 18 chrX 164586771 164586782 -2063514 - ID_B1 SINE B4 -34 190 82 1 1840 742 102 0 0 chrX 164586782 164586880 -2063416 - B1_Mm SINE Alu -49 98 1 1 1840 831 301 103 24 chrX 164587029 164587359 -2062937 + ORR1E LTR MaLR 2 357 -2 1 1840 497 325 18 53 chrX 164587637 164587806 -2062490 + RSINE1 SINE B4 3 165 0 1 1840 206 32 0 31 chrX 164587831 164587863 -2062433 + (TAA)n Simple_repeat Simple_repeat 2 32 0 1 1840 264 122 0 0 chrX 164588341 164588382 -2061914 + (TTTTC)n Simple_repeat Simple_repeat 4 44 0 1 1840 502 331 0 13 chrX 164588889 164589048 -2061248 + B3A SINE B2 36 192 -6 1 1840 227 245 0 0 chrX 164589143 164589196 -2061100 + B1_Mur4 SINE Alu 97 149 -1 1 1840 606 292 35 39 chrX 164589499 164589702 -2060594 + B3 SINE B2 5 206 -10 1 1840 751 274 67 113 chrX 164590359 164590792 -2059504 + RMER10A LTR ERVL 1 413 -29 1 1840 1077 158 113 5 chrX 164590854 164591058 -2059238 + URR1A DNA MER1_type 1 226 0 1 1840 500 252 18 18 chrX 164591439 164591548 -2058748 + B3A SINE B2 28 136 -62 1 1840 676 242 119 16 chrX 164591566 164591759 -2058537 - B3 SINE B2 0 216 4 1 1840 231 114 0 0 chrX 164591780 164591815 -2058481 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 1 1840 484 292 133 17 chrX 164591815 164591990 -2058306 - B3 SINE B2 -13 203 7 1 1840 236 53 26 0 chrX 164592216 164592254 -2058042 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1840 342 327 0 46 chrX 164593392 164593501 -2056795 + B3A SINE B2 69 172 -26 1 1840 306 308 24 79 chrX 164593688 164593786 -2056510 + ID_B1 SINE B4 92 184 -40 1 1840 207 139 0 0 chrX 164593786 164593822 -2056474 + (ATG)n Simple_repeat Simple_repeat 2 37 0 1 1840 306 308 24 79 chrX 164593822 164593850 -2056446 + ID_B1 SINE B4 185 211 -13 1 1840 249 57 0 0 chrX 164593877 164593912 -2056384 + (CAGAGA)n Simple_repeat Simple_repeat 4 38 0 1 1840 291 312 65 0 chrX 164593913 164593990 -2056306 - B1_Mur1 SINE Alu -17 132 51 1 1840 934 254 5 0 chrX 164594144 164594345 -2055951 + B3 SINE B2 15 216 0 1 1840 426 325 130 56 chrX 164594518 164594841 -2055455 + MLT1D LTR MaLR 34 380 -125 1 1840 823 322 10 24 chrX 164595329 164595625 -2054671 + B4A SINE B4 1 292 0 1 1840 21 0 0 0 chrX 164595739 164595760 -2054536 + AT_rich Low_complexity Low_complexity 1 21 0 1 1840 348 24 0 0 chrX 164596726 164596767 -2053529 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1840 1019 136 0 0 chrX 164597645 164597792 -2052504 + B1_Mus1 SINE Alu 2 148 0 2 1840 684 282 30 12 chrX 164598064 164598229 -2052067 - B3A SINE B2 -27 171 4 2 1840 486 271 9 0 chrX 164598242 164598349 -2051947 - ID_B1 SINE B4 0 224 117 2 1840 708 215 13 34 chrX 164598475 164598624 -2051672 + B1_Mur2 SINE Alu 2 147 -2 2 1840 210 341 8 47 chrX 164599555 164599684 -2050612 + GA-rich Low_complexity Low_complexity 2 125 0 2 1840 234 372 17 42 chrX 164600080 164600198 -2050098 + MLT1A1 LTR MaLR 1 115 -293 2 1840 315 242 7 61 chrX 164600360 164600471 -2049825 + MTEb LTR MaLR 269 379 0 2 1840 507 81 35 0 chrX 164600706 164600792 -2049504 + (GAGAA)n Simple_repeat Simple_repeat 4 92 0 2 1840 1635 184 121 30 chrX 164600792 164601196 -2049100 - RMER10A LTR ERVL -1 441 1 2 1840 1520 124 8 16 chrX 164601500 164601746 -2048550 - L1_Mus3 LINE L1 -4 6634 6391 2 1840 456 91 0 0 chrX 164601797 164601863 -2048433 + (CA)n Simple_repeat Simple_repeat 1 66 0 2 1840 519 238 82 0 chrX 164602376 164602498 -2047798 + B1_Mur1 SINE Alu 1 132 -17 2 1840 209 57 0 28 chrX 164602514 164602550 -2047746 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1840 467 263 27 62 chrX 164602943 164603089 -2047207 + B3A SINE B2 1 141 -57 2 1840 984 187 70 0 chrX 164603094 164603281 -2047015 + MTC LTR MaLR 6 205 -216 2 1840 2320 163 72 63 chrX 164603292 164603816 -2046480 + MERVL_2A-int LTR ERVL 4830 5358 -403 2 1840 1239 191 12 35 chrX 164603820 164604075 -2046221 + MTC-int LTR MaLR 853 1101 -157 2 1840 9988 162 46 12 chrX 164604080 164605927 -2044369 + MERVL_2A-int LTR ERVL 972 2881 -2880 2 1840 23 33 0 0 chrX 164605993 164606023 -2044273 + AT_rich Low_complexity Low_complexity 1 30 0 2 1840 895 255 60 5 chrX 164606204 164606421 -2043875 - B4A SINE B4 -62 230 2 2 1840 199 208 252 30 chrX 164606439 164606538 -2043758 + MIR SINE MIR 61 181 -81 2 1840 232 280 107 29 chrX 164606875 164606978 -2043318 - MIRm SINE MIR -165 111 1 2 1840 638 293 5 92 chrX 164607459 164607666 -2042630 - ID_B1 SINE B4 0 224 36 2 1840 750 220 192 0 chrX 164607708 164607885 -2042411 + B3 SINE B2 1 211 -5 2 1840 753 206 0 7 chrX 164607898 164608035 -2042261 + B1_Mus1 SINE Alu 3 138 -10 2 1840 360 0 0 0 chrX 164608036 164608076 -2042220 + (TAAAA)n Simple_repeat Simple_repeat 3 42 0 2 1840 254 321 15 33 chrX 164608518 164608638 -2041658 - B1F SINE Alu 0 120 3 2 1840 411 56 0 0 chrX 164608660 164608714 -2041582 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1840 748 269 4 94 chrX 164609144 164609378 -2040918 + ID_B1 SINE B4 1 213 -11 2 1840 774 273 145 40 chrX 164609419 164609906 -2040390 + L1MB7 LINE L1 5484 6026 -158 2 1840 195 42 0 0 chrX 164609906 164609930 -2040366 + (TA)n Simple_repeat Simple_repeat 2 25 0 2 1840 774 273 145 40 chrX 164609930 164610024 -2040272 + L1MB7 LINE L1 6027 6133 -51 2 1840 1577 57 0 0 chrX 164610024 164610217 -2040079 + B2_Mm1t SINE B2 1 193 0 2 1840 774 273 145 40 chrX 164610217 164610260 -2040036 + L1MB7 LINE L1 6134 6174 -10 2 1840 203 298 18 0 chrX 164610733 164610790 -2039506 + L3 LINE CR1 3473 3530 -959 2 1840 279 79 0 0 chrX 164610930 164610968 -2039328 + (CAG)n Simple_repeat Simple_repeat 2 39 0 2 1840 361 214 61 10 chrX 164610968 164611059 -2039237 + RLTR26 LTR ERVK 539 634 -8 2 1840 231 114 0 0 chrX 164611065 164611100 -2039196 + (T)n Simple_repeat Simple_repeat 1 35 0 2 1840 319 330 34 8 chrX 164611199 164611318 -2038978 + RSINE1 SINE B4 3 124 -41 2 1840 1127 253 76 32 chrX 164611315 164611717 -2038579 - RLTR26 LTR ERVK -184 458 5 2 1840 216 327 104 23 chrX 164611787 164611965 -2038331 - MIRb SINE MIR -64 204 3 2 1840 684 247 71 160 chrX 164612749 164612847 -2037449 - MTD LTR MaLR -151 268 208 2 1840 885 272 10 0 chrX 164612847 164613053 -2037243 - B3 SINE B2 -5 211 4 2 1840 684 247 71 160 chrX 164613053 164613248 -2037048 - MTD LTR MaLR -212 207 1 2 1840 348 197 30 0 chrX 164613314 164613380 -2036916 + ID_B1 SINE B4 148 215 -9 2 1840 428 342 84 0 chrX 164613518 164613708 -2036588 + ID_B1 SINE B4 2 207 -17 2 1840 858 275 77 50 chrX 164614170 164614507 -2035789 - MTEa LTR MaLR -15 364 19 2 1840 2504 124 46 56 chrX 164614544 164615024 -2035272 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1840 347 127 0 0 chrX 164615026 164615081 -2035215 + IAPEz-int LTR ERVK 3 57 -1930 2 1840 4155 58 68 23 chrX 164615062 164615680 -2034616 + IAPEz-int LTR ERVK 17 662 -5819 2 1840 424 38 0 0 chrX 164615680 164615733 -2034563 + IAPEz-int LTR ERVK 1359 1411 -5070 2 1840 1713 123 4 4 chrX 164615732 164615994 -2034302 + IAPEz-int LTR ERVK 2236 2497 -5183 2 1840 886 73 24 0 chrX 164615991 164616114 -2034182 + IAPEz-int LTR ERVK 4785 4910 -2770 2 1840 24922 18 3 2 chrX 164616114 164619068 -2031228 + IAPEz-int LTR ERVK 3525 6481 0 2 1840 2487 137 29 40 chrX 164619068 164619548 -2030748 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1840 219 320 13 0 chrX 164619581 164619656 -2030640 + L2a LINE L2 3047 3122 -304 2 1840 1533 189 55 13 chrX 164620328 164620697 -2029599 - MTD LTR MaLR -14 393 9 2 1840 236 218 66 47 chrX 164621428 164621534 -2028762 - RMER17C LTR ERVK -126 284 177 2 1840 285 262 16 0 chrX 164621678 164621739 -2028557 - MER20 DNA MER1_type -131 88 27 2 1840 444 340 74 6 chrX 164621867 164622030 -2028266 + MER58A DNA MER1_type 26 199 -25 2 1840 274 231 25 25 chrX 164622124 164622204 -2028092 + MIR SINE MIR 141 220 -42 2 1840 231 358 0 0 chrX 164622348 164622415 -2027881 + ID4_ SINE ID 4 70 -13 2 1840 6589 127 11 19 chrX 164622423 164623611 -2026685 + Lx2 LINE L1 5596 6997 0 2 1840 283 78 0 38 chrX 164623775 164623828 -2026468 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 2 1840 198 0 0 0 chrX 164624204 164624226 -2026070 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 1840 1618 206 39 63 chrX 164624433 164625111 -2025185 + RMER19B LTR ERVK 1 902 0 2 1840 599 243 25 93 chrX 164625118 164625315 -2024981 - B3A SINE B2 -29 187 1 2 1840 551 254 0 67 chrX 164625367 164625502 -2024794 - B1_Mur1 SINE Alu -16 133 8 2 1840 482 243 0 78 chrX 164625591 164625707 -2024589 + B3 SINE B2 1 107 -109 2 1840 293 188 0 12 chrX 164625724 164625805 -2024491 + (TA)n Simple_repeat Simple_repeat 1 80 0 2 1840 342 138 0 138 chrX 164626044 164626153 -2024143 + Lx4B LINE L1 6961 7054 -4 2 1840 676 264 84 0 chrX 164626180 164626347 -2023949 + B3A SINE B2 2 182 -16 2 28 557 241 34 34 chrX 164626407 164626553 -2023743 + B1_Mur2 SINE Alu 2 147 -2 2 1841 340 312 14 14 chrX 164626636 164626779 -2023517 + L1M5 LINE L1 5565 5707 -466 2 1841 362 291 48 57 chrX 164626966 164627090 -2023206 + B1F SINE Alu 9 131 -18 2 1841 283 290 19 9 chrX 164627093 164627201 -2023095 + GA-rich Low_complexity Low_complexity 2 110 0 2 1841 300 27 0 0 chrX 164627264 164627301 -2022995 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2 1841 7248 54 8 0 chrX 164627732 164628618 -2021678 + RLTR13B1 LTR ERVK 1 893 0 2 1841 1086 225 187 13 chrX 164628781 164629096 -2021200 + ORR1D2 LTR MaLR 1 370 0 2 1841 456 305 31 26 chrX 164629359 164629554 -2020742 - RMER30 DNA MER1_type -2 200 5 2 1841 502 283 85 48 chrX 164630332 164630521 -2019775 - RMER30 DNA MER1_type 0 202 7 2 1841 635 275 115 49 chrX 164630655 164630837 -2019459 + B3 SINE B2 1 204 -12 2 1841 231 36 0 0 chrX 164630840 164630868 -2019428 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 2 1841 261 0 0 0 chrX 164630986 164631015 -2019281 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1841 439 220 24 6 chrX 164631324 164631493 -2018803 + CT-rich Low_complexity Low_complexity 2 173 0 2 1841 459 0 0 0 chrX 164631643 164631694 -2018602 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 2 1841 227 227 30 0 chrX 164632222 164632288 -2018008 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 2 1841 449 248 184 0 chrX 164633376 164633517 -2016779 + MTE2a LTR MaLR 16 182 -197 2 1841 219 114 0 0 chrX 164633521 164633556 -2016740 + (ATG)n Simple_repeat Simple_repeat 2 36 0 2 1841 548 311 47 57 chrX 164634170 164634381 -2015915 - B3A SINE B2 -7 209 1 2 1841 261 0 0 0 chrX 164634936 164634965 -2015331 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1841 734 204 15 0 chrX 164635065 164635202 -2015094 + B1_Mur1 SINE Alu 2 140 -9 2 1841 815 102 0 8 chrX 164635202 164635331 -2014965 + (GGA)n Simple_repeat Simple_repeat 3 130 0 2 1841 281 318 136 0 chrX 164635828 164635892 -2014404 + ID SINE ID 6 81 -143 2 1841 275 380 58 0 chrX 164635892 164636013 -2014283 + B1F SINE Alu 1 128 -21 2 1841 3944 79 93 20 chrX 164636884 164637542 -2012754 - Lx3_Mus LINE L1 -459 6550 5845 2 1841 2804 83 69 36 chrX 164637548 164637997 -2012299 + Lx3_Mus LINE L1 6538 7001 -8 2 1841 232 321 0 0 chrX 164638016 164638072 -2012224 + tRNA-Ala-GCY_ tRNA tRNA 16 71 -4 2 1841 424 326 39 33 chrX 164638591 164638772 -2011524 + MER20 DNA MER1_type 29 210 -9 2 1841 343 357 57 102 chrX 164639070 164639193 -2011103 + MLT1E1 LTR MaLR 52 179 -381 2 1841 907 135 6 51 chrX 164639193 164639349 -2010947 + B1_Mur4 SINE Alu 2 150 0 2 1841 343 357 57 102 chrX 164639349 164639540 -2010756 + MLT1E1 LTR MaLR 180 352 -208 2 1841 1819 193 0 26 chrX 164639536 164639881 -2010415 + MTB_Mm LTR MaLR 72 407 0 2 1841 481 271 146 108 chrX 164639887 164640127 -2010169 + MLT1E1 LTR MaLR 397 645 -9 2 1841 378 0 0 0 chrX 164640459 164640501 -2009795 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1841 315 0 0 0 chrX 164640501 164640535 -2009761 + (GA)n Simple_repeat Simple_repeat 1 35 0 2 1841 644 325 12 0 chrX 164640538 164640701 -2009595 - B3A SINE B2 -33 165 1 2 1841 296 284 12 0 chrX 164640723 164640804 -2009492 - PB1D10 SINE Alu -1 116 35 2 1841 1058 146 75 5 chrX 164640864 164641063 -2009233 - URR1A DNA MER1_type -1 225 13 2 1841 266 321 12 0 chrX 164641683 164641764 -2008532 + B1F SINE Alu 1 82 -67 2 1841 343 342 9 9 chrX 164641813 164641928 -2008368 + RSINE1 SINE B4 50 164 -1 2 1841 596 256 51 13 chrX 164642465 164642623 -2007673 - RSINE1 SINE B4 0 165 2 3 1841 1238 138 20 0 chrX 164642877 164643072 -2007224 + URR1B DNA MER1_type 27 225 0 3 1841 480 246 25 34 chrX 164643072 164643184 -2007112 + B1F SINE Alu 37 147 -2 3 1841 217 364 13 0 chrX 164643197 164643274 -2007022 + ID4_ SINE ID 6 83 0 3 1841 232 302 233 0 chrX 164643899 164643985 -2006311 + ID_B1 SINE B4 66 171 -53 3 1841 416 89 0 0 chrX 164644135 164644191 -2006105 + B3A SINE B2 1 56 -142 3 1841 318 299 9 61 chrX 164644259 164644373 -2005923 + PB1D10 SINE Alu 10 117 0 3 1841 216 0 0 0 chrX 164644498 164644522 -2005774 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1841 466 278 40 80 chrX 164644522 164644764 -2005532 - L1MC1 LINE L1 -115 6218 5986 3 1841 467 271 1 29 chrX 164644913 164645053 -2005243 + MTEa LTR MaLR 238 371 -8 3 1841 299 301 54 65 chrX 164646589 164646774 -2003522 + Cheshire DNA MER1_type 70 252 -2168 3 1841 290 217 152 0 chrX 164646934 164647026 -2003270 + PB1D10 SINE Alu 11 116 -1 3 1841 283 254 0 0 chrX 164648448 164648511 -2001785 + B3A SINE B2 2 64 -134 3 1841 246 318 7 29 chrX 164648741 164648877 -2001419 + GA-rich Low_complexity Low_complexity 2 134 0 3 1841 246 279 104 31 chrX 164648944 164649040 -2001256 + MIRb SINE MIR 83 185 -83 3 1841 813 215 0 0 chrX 164649546 164649690 -2000606 - B1_Mur2 SINE Alu -1 148 5 3 1841 378 333 96 70 chrX 164649909 164650138 -2000158 + B4 SINE B4 57 291 -1 3 1841 283 359 93 34 chrX 164650213 164650536 -1999760 + L2c LINE L2 1618 1959 -1460 3 1841 485 270 15 0 chrX 164650698 164650835 -1999461 + Lx7 LINE L1 6965 7103 -593 3 1841 204 354 154 36 chrX 164651005 164651225 -1999071 + L2c LINE L2 2084 2329 -1090 3 1841 330 290 155 54 chrX 164651257 164651534 -1998762 + L2c LINE L2 2586 2890 -529 3 1841 180 350 38 0 chrX 164651627 164651707 -1998589 + L2c LINE L2 3073 3155 -271 3 1841 186 266 61 157 chrX 164651745 164651892 -1998404 + L2c LINE L2 3239 3371 -16 3 1841 226 319 29 14 chrX 164652029 164652099 -1998197 + ID4_ SINE ID 9 79 -4 3 1841 452 223 103 35 chrX 164652260 164652376 -1997920 + B1F1 SINE Alu 26 149 0 3 1841 851 293 57 47 chrX 164652503 164652890 -1997406 + MT2A LTR ERVL 2 392 -141 3 1841 481 294 111 0 chrX 164652841 164652967 -1997329 - B3A SINE B2 -33 165 26 3 1841 1388 304 62 23 chrX 164653064 164653545 -1996751 - MLT1D LTR MaLR 0 505 6 3 1841 1264 120 10 5 chrX 164653840 164654033 -1996263 - B2_Mm2 SINE B2 0 195 2 3 1841 403 205 0 74 chrX 164654964 164654976 -1995320 + MT2B LTR ERVL 153 157 -444 3 1841 736 74 0 0 chrX 164654976 164655071 -1995225 + B1_Mm SINE Alu 1 95 -52 3 1841 224 59 29 0 chrX 164655072 164655106 -1995190 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 3 1841 648 303 48 77 chrX 164655116 164655437 -1994859 + B4A SINE B4 1 281 -11 3 1841 252 0 0 0 chrX 164655437 164655465 -1994831 + (CCA)n Simple_repeat Simple_repeat 2 29 0 3 1841 225 117 33 16 chrX 164655466 164655527 -1994769 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 1841 320 230 49 21 chrX 164655540 164655682 -1994614 + (CA)n Simple_repeat Simple_repeat 1 146 0 3 1841 1985 104 93 3 chrX 164656277 164656577 -1993719 + ORR1A2 LTR MaLR 1 327 0 3 1841 23 33 0 0 chrX 164656959 164656989 -1993307 + AT_rich Low_complexity Low_complexity 1 30 0 3 1841 1139 202 10 25 chrX 164657061 164657259 -1993037 + B3 SINE B2 1 195 -21 3 1841 222 62 0 0 chrX 164657266 164657298 -1992998 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 3 1841 318 50 0 0 chrX 164657344 164657384 -1992912 + (T)n Simple_repeat Simple_repeat 1 40 0 3 1841 1103 224 94 57 chrX 164657452 164657783 -1992513 - ORR1D1 LTR MaLR -11 363 21 3 1841 4307 158 63 77 chrX 164657807 164658771 -1991525 + RMER17B LTR ERVK 8 958 0 3 1841 697 274 6 19 chrX 164659494 164659676 -1990620 + ID_B1 SINE B4 64 243 -49 3 1841 431 305 0 0 chrX 164659754 164659859 -1990437 - PB1D7 SINE Alu -10 110 6 3 1841 293 305 24 12 chrX 164659883 164659966 -1990330 - RSINE1 SINE B4 -68 97 14 3 1841 408 223 10 50 chrX 164660200 164660299 -1989997 + PB1 SINE Alu 31 125 -2 3 1841 200 102 39 58 chrX 164660299 164660351 -1989945 + A-rich Low_complexity Low_complexity 5 55 0 3 1841 1279 243 89 25 chrX 164660434 164660881 -1989415 + L1Md_F LINE L1 256 731 -5788 3 1841 16787 98 10 4 chrX 164660862 164664195 -1986101 + L1_Mus1 LINE L1 3215 6654 0 3 1841 3217 46 5 2 chrX 164665153 164665548 -1984748 - MTA_Mm LTR MaLR 0 396 1 3 1841 477 0 0 0 chrX 164665652 164665705 -1984591 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1841 275 0 29 0 chrX 164665708 164665743 -1984553 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1841 396 0 0 0 chrX 164665863 164665907 -1984389 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1841 415 309 32 118 chrX 164665943 164666258 -1984038 - B4A SINE B4 -4 288 1 3 1841 1257 291 70 25 chrX 164666797 164667269 -1983027 + RMER5 LTR ERV1 42 534 0 3 1841 237 139 0 0 chrX 164667657 164667700 -1982596 + (T)n Simple_repeat Simple_repeat 1 43 0 3 1841 1358 303 44 18 chrX 164668027 164668484 -1981812 + Lx5 LINE L1 6563 7031 -19 3 1841 200 189 0 0 chrX 164668564 164668601 -1981695 + A-rich Low_complexity Low_complexity 4 40 0 3 1841 1812 182 16 63 chrX 164669102 164669484 -1980812 + ORR1C1 LTR MaLR 1 364 -14 3 1841 36 23 0 0 chrX 164670012 164670055 -1980241 + AT_rich Low_complexity Low_complexity 1 43 0 3 1841 1663 82 0 0 chrX 164670058 164670278 -1980018 - L1_Mus2 LINE L1 -1 6565 6346 3 1841 551 323 77 18 chrX 164670302 164670472 -1979824 - ID_B1 SINE B4 -44 180 1 3 1841 610 261 28 0 chrX 164670696 164670838 -1979458 - B1_Mur1 SINE Alu -3 146 1 3 1841 353 333 0 64 chrX 164670880 164671021 -1979275 + RSINE1 SINE B4 3 134 -31 3 1841 306 0 0 0 chrX 164671065 164671099 -1979197 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 1841 276 100 0 0 chrX 164671327 164671367 -1978929 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1841 504 295 0 26 chrX 164671375 164671490 -1978806 + B3 SINE B2 48 159 -57 3 1841 180 77 0 0 chrX 164672211 164672237 -1978059 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1841 278 53 0 0 chrX 164672698 164672736 -1977560 - L1_Mus1 LINE L1 -475 6092 6055 3 1841 3833 56 0 6 chrX 164672736 164673220 -1977076 + L1_Mus1 LINE L1 6087 6567 0 3 1841 661 292 18 45 chrX 164673473 164673563 -1976733 + ID SINE ID 2 85 -139 3 1841 1382 90 5 0 chrX 164673563 164673751 -1976545 + B2_Mm1t SINE B2 1 189 -4 3 1841 661 292 18 45 chrX 164673751 164673882 -1976414 + ID_B1 SINE B4 86 217 -7 3 1841 390 42 0 0 chrX 164674413 164674461 -1975835 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1841 259 337 200 17 chrX 164674467 164674626 -1975670 - B4A SINE B4 -20 272 89 3 1841 423 38 0 0 chrX 164674626 164674679 -1975617 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 1841 259 337 200 17 chrX 164674679 164674694 -1975602 - B4A SINE B4 -204 88 67 3 1841 359 263 57 50 chrX 164674870 164675010 -1975286 + L1M5 LINE L1 5655 5795 -367 3 1841 513 271 0 8 chrX 164675020 164675137 -1975159 + B1F1 SINE Alu 9 117 0 3 1841 262 314 43 0 chrX 164675303 164675373 -1974923 + ID4 SINE ID 11 83 0 3 1841 830 276 71 4 chrX 164675691 164675910 -1974386 - ID_B1 SINE B4 -45 247 13 3 1841 7199 79 6 7 chrX 164675917 164677175 -1973121 - L1_Mus1 LINE L1 0 6567 5313 3 1841 1961 73 0 68 chrX 164677669 164677962 -1972334 + L1_Mus1 LINE L1 6294 6566 -1 3 1841 459 290 35 2 chrX 164677981 164678107 -1972189 + PB1D10 SINE Alu 1 128 -21 3 1841 435 292 53 15 chrX 164678512 164678644 -1971652 - B3A SINE B2 -16 182 46 3 1841 333 0 0 0 chrX 164678650 164678687 -1971609 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 3 1841 469 237 34 57 chrX 164678687 164678863 -1971433 - ID_B1 SINE B4 -12 212 6 3 1841 677 226 109 36 chrX 164679297 164679490 -1970806 - MTD LTR MaLR -14 405 199 3 1841 3945 147 58 14 chrX 164679549 164680273 -1970023 - RMER6A LTR ERVK 0 756 1 3 1841 242 150 0 0 chrX 164680539 164680579 -1969717 + PB1D9 SINE Alu 2 41 -79 3 1841 2120 209 38 41 chrX 164680597 164680720 -1969576 - Lx9 LINE L1 -147 7497 7370 3 1841 1173 264 38 30 chrX 164680720 164681091 -1969205 + ORR1D1 LTR MaLR 1 374 0 3 1841 2120 209 38 41 chrX 164681091 164681551 -1968745 - Lx9 LINE L1 -275 7369 6916 3 1841 8005 27 2 1 chrX 164681682 164682899 -1967397 - L1Md_T LINE L1 -1 6581 5364 3 1841 6267 182 35 9 chrX 164682974 164684463 -1965833 + Lx3C LINE L1 5434 7050 -8 3 1841 699 311 38 24 chrX 164684546 164684757 -1965539 - ID_B1 SINE B4 -10 214 1 3 1841 3586 81 6 2 chrX 164685335 164685818 -1964478 - L1_Mus2 LINE L1 0 6566 6082 3 1841 494 261 50 7 chrX 164686163 164686302 -1963994 + URR1B DNA MER1_type 1 145 -80 3 1841 1429 146 10 178 chrX 164686546 164687036 -1963260 + RMER17C LTR ERVK 3 410 0 3 1841 539 85 12 0 chrX 164687037 164687119 -1963177 + (TA)n Simple_repeat Simple_repeat 1 83 0 3 1841 234 160 0 0 chrX 164687382 164687432 -1962864 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1841 281 269 25 13 chrX 164687516 164687595 -1962701 - ID2 SINE ID -2 81 2 3 1841 612 293 114 59 chrX 164688077 164688313 -1961983 + B4A SINE B4 24 272 -20 3 1841 409 339 0 0 chrX 164688701 164688813 -1961483 - ID_B1 SINE B4 -23 201 90 3 1841 1037 231 10 0 chrX 164688849 164689052 -1961244 - B3 SINE B2 -11 205 1 3 1841 384 218 12 37 chrX 164689088 164689169 -1961127 + ID4 SINE ID 3 81 -2 3 1841 396 0 0 0 chrX 164689861 164689905 -1960391 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1841 186 118 0 0 chrX 164690159 164690193 -1960103 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 3 1841 195 100 0 0 chrX 164690352 164690382 -1959914 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1841 2378 180 0 11 chrX 164690450 164690900 -1959396 - RMER6A LTR ERVK 0 756 312 4 1841 1454 186 26 45 chrX 164690895 164691243 -1959053 - RMER6A LTR ERVK -329 427 38 4 1841 1369 232 27 46 chrX 164691429 164691758 -1958538 + MTEb LTR MaLR 56 378 -1 4 1841 1666 158 61 64 chrX 164691970 164692329 -1957967 + ORR1B1 LTR MaLR 29 386 -8 4 1841 4590 228 52 12 chrX 164692333 164693490 -1956806 + ORR1B1-int LTR MaLR 1 1203 -306 4 1841 5189 81 42 4 chrX 164693494 164694209 -1956087 + Lx3_Mus LINE L1 6268 7009 0 4 1841 6836 174 28 3 chrX 164694225 164695703 -1954593 + Lx5 LINE L1 5427 6949 -101 4 1841 211 28 27 27 chrX 164695899 164695936 -1954360 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 4 1841 402 150 50 19 chrX 164695936 164696045 -1954251 - B1_Mus2 SINE Alu 0 147 6 4 1841 368 118 141 0 chrX 164696253 164696338 -1953958 + Lx5 LINE L1 6954 7050 0 4 1841 890 195 40 17 chrX 164696350 164696527 -1953769 + ORR1B1 LTR MaLR 214 394 0 4 1841 334 114 86 0 chrX 164697572 164697642 -1952654 + Lx6 LINE L1 7359 7434 -26 4 1841 349 337 87 22 chrX 164697646 164697831 -1952465 - L1MC4a LINE L1 -197 7685 7489 4 1841 236 30 30 0 chrX 164697832 164697865 -1952431 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1841 388 283 10 48 chrX 164697865 164697969 -1952327 - ID_B1 SINE B4 -9 215 116 4 1841 832 287 0 81 chrX 164698154 164698258 -1952038 - B3 SINE B2 0 216 121 4 1841 2784 19 3 0 chrX 164698258 164698579 -1951717 - RLTRETN_Mm LTR ERVK 0 322 1 4 1841 832 287 0 81 chrX 164698579 164698709 -1951587 - B3 SINE B2 -96 120 1 4 1841 438 310 121 10 chrX 164698745 164698944 -1951352 - ID_B1 SINE B4 0 224 4 4 1841 518 277 36 0 chrX 164699184 164699321 -1950975 - B1F1 SINE Alu -6 143 2 4 1841 289 288 0 14 chrX 164701118 164701192 -1949104 - ID4_ SINE ID -7 76 4 4 1841 744 263 62 5 chrX 164701302 164701343 -1948953 - B3 SINE B2 -10 206 167 4 1841 348 24 0 0 chrX 164701343 164701384 -1948912 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1841 744 263 62 5 chrX 164701384 164701537 -1948759 - B3 SINE B2 -50 166 2 4 1841 276 327 32 106 chrX 164702020 164702080 -1948216 + ID SINE ID 29 79 -145 4 1841 304 210 0 31 chrX 164702080 164702144 -1948152 + B1_Mur3 SINE Alu 1 62 -87 4 1841 1123 280 55 15 chrX 164702572 164702898 -1947398 + ORR1E LTR MaLR 21 359 0 4 1841 588 312 14 23 chrX 164703648 164703868 -1946428 - MER20 DNA MER1_type -1 218 1 4 1841 8672 117 1 27 chrX 164704074 164705339 -1944957 - Lx LINE L1 -5 6649 5445 4 1841 2555 65 21 3 chrX 164705339 164705678 -1944618 - L1_Mus1 LINE L1 0 6567 6223 4 1841 8672 153 4 20 chrX 164705678 164706832 -1943464 - Lx LINE L1 -439 5444 4286 4 1841 287 286 110 20 chrX 164706916 164707016 -1943280 + PB1 SINE Alu 5 113 -14 4 1841 1346 255 79 38 chrX 164707116 164707721 -1942575 - RLTR40 LTR ERVK -40 777 56 4 1841 988 266 40 67 chrX 164707727 164707951 -1942345 + Lx6 LINE L1 7086 7302 -158 4 1841 868 209 90 24 chrX 164707951 164708162 -1942134 - URR1A DNA MER1_type 0 226 2 4 1841 988 266 40 67 chrX 164708162 164708312 -1941984 + Lx6 LINE L1 7303 7450 -10 4 1841 468 249 83 42 chrX 164708408 164708575 -1941721 + B3A SINE B2 44 211 -5 4 1841 692 230 150 9 chrX 164708744 164709037 -1941259 + Lx9 LINE L1 5611 5971 -1673 4 1841 300 27 0 0 chrX 164709294 164709331 -1940965 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1841 583 48 24 0 chrX 164709331 164709413 -1940883 + (GA)n Simple_repeat Simple_repeat 2 86 0 4 1841 770 306 112 33 chrX 164709449 164709805 -1940491 + MLT1E1A LTR MaLR 259 624 0 4 1841 359 304 152 91 chrX 164710088 164710107 -1940189 + B4A SINE B4 70 107 -185 4 1841 477 267 0 19 chrX 164710107 164710210 -1940086 + B1F1 SINE Alu 3 103 -46 4 1841 359 304 152 91 chrX 164710210 164710298 -1939998 + B4A SINE B4 108 292 0 4 1841 398 143 0 58 chrX 164710298 164710402 -1939894 + (CA)n Simple_repeat Simple_repeat 1 98 0 4 1841 426 121 0 0 chrX 164710505 164710571 -1939725 + (GGGA)n Simple_repeat Simple_repeat 3 68 0 4 1841 732 265 14 33 chrX 164710690 164710901 -1939395 - B3 SINE B2 -6 210 4 4 1841 287 344 0 31 chrX 164711347 164711476 -1938820 + RSINE1 SINE B4 12 136 -29 4 1841 189 107 0 0 chrX 164711488 164711516 -1938780 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 1841 201 159 0 49 chrX 164711820 164711920 -1938376 + (TA)n Simple_repeat Simple_repeat 1 95 0 4 1841 5660 72 12 0 chrX 164711920 164712657 -1937639 + L1_Mus1 LINE L1 5822 6567 0 4 1841 201 220 0 57 chrX 164712657 164712700 -1937596 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 1841 46 92 0 17 chrX 164712708 164712885 -1937411 + AT_rich Low_complexity Low_complexity 1 174 0 4 1841 1171 289 14 14 chrX 164713139 164713423 -1936873 - MTE2b LTR MaLR -95 284 1 4 1841 489 76 0 0 chrX 164713565 164713631 -1936665 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 1841 263 329 74 62 chrX 164714276 164714438 -1935858 + MLT1J2 LTR MaLR 35 198 -246 4 1841 609 288 41 14 chrX 164714504 164714681 -1935615 + ID_B1 SINE B4 1 183 -109 4 1841 614 75 11 0 chrX 164714726 164714819 -1935477 + (GA)n Simple_repeat Simple_repeat 1 94 0 4 1841 293 273 50 10 chrX 164714848 164714948 -1935348 + MLT1J2 LTR MaLR 336 439 -9 4 1841 374 317 82 14 chrX 164715139 164715286 -1935010 + MIRb SINE MIR 25 181 -27 4 1841 360 297 111 21 chrX 164715911 164716100 -1934196 + MER46C DNA MER2_type 80 285 -53 4 1841 337 225 92 98 chrX 164716529 164716682 -1933614 + MLT1C LTR MaLR 7 158 -309 4 1841 813 219 14 0 chrX 164718190 164718336 -1931960 - B1_Mur1 SINE Alu -1 148 1 4 1841 200 86 29 0 chrX 164718653 164718688 -1931608 + (TCCC)n Simple_repeat Simple_repeat 2 37 0 4 1841 254 354 62 0 chrX 164718713 164718809 -1931487 - B1F2 SINE Alu -42 107 6 4 1841 251 366 0 0 chrX 164718856 164718927 -1931369 - ID4_ SINE ID -9 74 4 4 1841 261 313 44 44 chrX 164718928 164719068 -1931228 - MLT1J LTR MaLR -341 171 41 4 1841 249 146 0 0 chrX 164719427 164719475 -1930821 + (TC)n Simple_repeat Simple_repeat 1 48 0 4 1841 415 0 18 18 chrX 164719476 164719532 -1930764 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 1841 461 286 21 28 chrX 164719862 164720006 -1930290 - B3A SINE B2 -53 145 3 4 1841 243 0 0 0 chrX 164720177 164720204 -1930092 + (CATA)n Simple_repeat Simple_repeat 2 28 0 4 1841 440 183 24 0 chrX 164720616 164720698 -1929598 + B3A SINE B2 6 89 -109 4 1841 293 209 60 0 chrX 164720705 164720772 -1929524 + B1_Mur2 SINE Alu 79 149 0 4 1841 327 266 101 36 chrX 164721624 164721792 -1928504 + B2_Mm2 SINE B2 8 186 -9 4 1841 1497 144 131 58 chrX 164721999 164722187 -1928109 - RMER17C LTR ERVK 0 410 186 4 1841 552 42 0 0 chrX 164722187 164722258 -1928038 + (GA)n Simple_repeat Simple_repeat 2 72 0 4 1841 1497 144 131 58 chrX 164722258 164722451 -1927845 - RMER17C LTR ERVK -225 185 2 4 1841 599 307 29 8 chrX 164722614 164722860 -1927436 + L1M4 LINE L1 3986 4236 -1910 4 1841 588 29 0 0 chrX 164723177 164723247 -1927049 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 1841 356 244 0 0 chrX 164723995 164724073 -1926223 - ID4_ SINE ID -4 79 2 4 1841 323 273 26 0 chrX 164724307 164724384 -1925912 + MER20 DNA MER1_type 140 218 -1 4 1841 270 291 0 25 chrX 164725026 164725107 -1925189 + MER58A DNA MER1_type 64 142 -82 4 1841 450 0 0 0 chrX 164725139 164725189 -1925107 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 1841 525 347 35 23 chrX 164725288 164725459 -1924837 + B3A SINE B2 1 173 -25 4 1841 405 129 0 0 chrX 164725460 164725530 -1924766 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 1841 706 173 6 25 chrX 164726239 164726399 -1923897 - L1MA9 LINE L1 -26 6286 6130 4 1841 888 274 4 18 chrX 164727184 164727411 -1922885 + ID_B1 SINE B4 1 224 0 4 1841 792 32 0 0 chrX 164727416 164727511 -1922785 + (GGAAA)n Simple_repeat Simple_repeat 2 96 0 4 1841 329 299 80 45 chrX 164728022 164728134 -1922162 + B1F1 SINE Alu 2 117 -32 4 1841 321 254 138 41 chrX 164728341 164728464 -1921832 + B1F1 SINE Alu 5 139 -10 4 1841 397 322 135 50 chrX 164728747 164728985 -1921311 - MLT1F LTR MaLR -174 405 179 4 1841 795 21 0 0 chrX 164729070 164729163 -1921133 + (TG)n Simple_repeat Simple_repeat 1 93 0 4 1841 221 286 99 14 chrX 164729167 164729238 -1921058 - PB1D7 SINE Alu -43 77 1 4 1841 182 191 21 0 chrX 164729947 164729994 -1920302 + (CATA)n Simple_repeat Simple_repeat 1 48 0 4 1841 215 307 76 38 chrX 164730928 164731033 -1919263 + MER5A DNA MER1_type 11 119 -70 4 1841 1001 245 10 0 chrX 164731051 164731247 -1919049 - B3 SINE B2 -2 214 17 4 1841 297 51 0 0 chrX 164731266 164731305 -1918991 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1841 249 333 0 0 chrX 164731545 164731614 -1918682 - Lx8 LINE L1 -277 7196 7128 4 1841 324 301 96 84 chrX 164731619 164731660 -1918636 + CYRA11_Mm Unknown Y-chromosome 131 342 -275 4 1841 884 237 52 5 chrX 164731660 164731872 -1918424 - URR1B DNA MER1_type -3 222 1 4 1841 430 333 16 0 chrX 164732093 164732219 -1918077 + B1F2 SINE Alu 1 128 -21 4 1841 318 281 214 0 chrX 164732404 164732493 -1917803 + PB1 SINE Alu 3 110 -17 4 1841 480 326 36 62 chrX 164732580 164732773 -1917523 + B3A SINE B2 10 197 -1 4 1841 815 177 0 52 chrX 164733079 164733094 -1917202 - B1_Mus2 SINE Alu 0 147 134 4 1841 222 37 0 0 chrX 164733094 164733121 -1917175 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1841 815 177 0 52 chrX 164733121 164733260 -1917036 - B1_Mus2 SINE Alu -14 133 1 4 1841 241 191 43 0 chrX 164733593 164733640 -1916656 - Lx8 LINE L1 -232 7241 7193 4 1841 359 313 81 0 chrX 164733676 164733775 -1916521 - PB1D10 SINE Alu -9 108 2 4 1841 411 342 12 0 chrX 164736351 164736512 -1913784 - MER46C DNA MER2_type -59 279 117 4 1841 941 250 62 5 chrX 164737286 164737495 -1912801 + ID_B1 SINE B4 2 222 -2 5 1841 455 271 19 119 chrX 164737537 164737696 -1912600 + RSINE1 SINE B4 17 159 -6 5 1841 462 124 0 0 chrX 164737857 164737946 -1912350 + (TCTCTG)n Simple_repeat Simple_repeat 2 90 0 5 1841 445 346 7 7 chrX 164738488 164738625 -1911671 + ID_B1 SINE B4 1 137 -87 5 1841 1729 305 31 12 chrX 164738758 164739429 -1910867 + Lx8 LINE L1 6789 7472 -1 5 1841 283 258 183 99 chrX 164740095 164740122 -1910174 - B4 SINE B4 -48 244 91 5 1841 641 152 26 26 chrX 164740122 164740237 -1910059 - PB1D9 SINE Alu 0 120 6 5 1841 1137 244 97 21 chrX 164740241 164740572 -1909724 - ORR1E LTR MaLR 0 359 4 5 1841 946 270 85 94 chrX 164741550 164741966 -1908330 - MTE2b LTR MaLR -18 401 3 5 1841 511 76 62 12 chrX 164742377 164742457 -1907839 - ORR1A4 LTR MaLR 0 329 246 5 1841 391 313 12 164 chrX 164742529 164742865 -1907431 - B4A SINE B4 -7 285 1 5 1841 395 230 0 0 chrX 164743619 164743693 -1906603 - ID4_ SINE ID -9 74 1 5 1841 219 150 0 0 chrX 164743718 164743758 -1906538 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 1841 558 287 92 64 chrX 164743789 164744072 -1906224 - B4A SINE B4 0 292 2 5 1841 268 300 0 48 chrX 164744513 164744597 -1905699 + ID4_ SINE ID 1 80 -3 5 1841 677 351 14 25 chrX 164744651 164744934 -1905362 + B4A SINE B4 9 288 -4 5 1841 4018 69 60 0 chrX 164745597 164746133 -1904163 + L1_Mus1 LINE L1 5998 6565 -2 5 1841 459 0 0 0 chrX 164746140 164746191 -1904105 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 1841 746 286 20 25 chrX 164746267 164746471 -1903825 + B3 SINE B2 1 203 -13 5 1841 215 289 0 0 chrX 164746611 164746663 -1903633 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 1841 793 324 19 14 chrX 164746807 164747020 -1903276 - ID_B1 SINE B4 -7 217 4 5 1841 422 330 116 11 chrX 164747322 164747503 -1902793 - MER20 DNA MER1_type -19 200 1 5 1841 695 282 13 0 chrX 164749528 164749684 -1900612 + ID_B1 SINE B4 53 210 -14 5 1841 358 347 62 77 chrX 164750083 164750292 -1900004 + B4 SINE B4 2 207 -85 5 1841 309 340 123 60 chrX 164750501 164750817 -1899479 + MLT1E1A LTR MaLR 345 680 0 5 1841 453 348 19 0 chrX 164750988 164751146 -1899150 - RSINE1 SINE B4 -3 162 2 5 1841 713 287 71 109 chrX 164751232 164751508 -1898788 - L1MB5 LINE L1 -2 6172 5888 5 1841 303 28 0 0 chrX 164751508 164751544 -1898752 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1841 713 287 71 109 chrX 164751544 164751569 -1898727 - L1MB5 LINE L1 -287 5887 5871 5 1841 279 0 0 0 chrX 164751569 164751600 -1898696 + (GTTTG)n Simple_repeat Simple_repeat 4 34 0 5 1841 660 213 37 0 chrX 164751601 164751737 -1898559 - B1_Mur4 SINE Alu -9 141 1 5 1841 713 287 71 109 chrX 164751737 164752175 -1898121 - L1MB5 LINE L1 -304 5870 5459 5 1841 408 286 89 89 chrX 164752274 164752443 -1897853 - B4A SINE B4 -18 274 106 5 1841 650 242 8 58 chrX 164752523 164752782 -1897514 - L1MB5 LINE L1 -842 5304 5059 5 1841 589 312 12 79 chrX 164753100 164753340 -1896956 - B4A SINE B4 -18 274 51 5 1841 661 57 19 19 chrX 164753483 164753590 -1896706 + (TCTCTG)n Simple_repeat Simple_repeat 2 108 0 5 1841 267 103 0 0 chrX 164753675 164753714 -1896582 + (A)n Simple_repeat Simple_repeat 1 39 0 5 1841 1184 187 37 0 chrX 164754214 164754428 -1895868 + URR1B DNA MER1_type 3 224 -1 5 1841 960 324 33 4 chrX 164754444 164754717 -1895579 + B4 SINE B4 12 292 0 5 1841 309 304 151 5 chrX 164754911 164755096 -1895200 + L1MEd LINE L1 639 850 -5286 5 1841 363 23 0 0 chrX 164755100 164755144 -1895152 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1841 440 244 89 0 chrX 164755144 164755234 -1895062 - ID_B1 SINE B4 -16 208 111 5 1841 580 282 0 47 chrX 164755531 164755680 -1894616 + RSINE1 SINE B4 2 143 -22 5 1841 602 168 8 0 chrX 164756878 164756889 -1893407 + polypurine Low_complexity Low_complexity 4 14 0 5 1841 2598 71 150 0 chrX 164756889 164757065 -1893231 - BGLII LTR ERVK 0 421 246 5 1841 950 73 0 7 chrX 164757065 164757202 -1893094 + (TTC)n Simple_repeat Simple_repeat 3 138 0 5 1841 2598 71 150 0 chrX 164757202 164757391 -1892905 - BGLII LTR ERVK -176 245 2 5 1841 602 168 8 0 chrX 164757391 164757504 -1892792 + GA-rich Low_complexity Low_complexity 15 128 0 5 1842 297 222 14 0 chrX 164757547 164757619 -1892677 + PB1 SINE Alu 32 104 -23 5 1842 26 74 0 0 chrX 164757778 164757832 -1892464 + AT_rich Low_complexity Low_complexity 1 54 0 5 1842 6024 52 8 1 chrX 164757965 164758723 -1891573 + L1Md_F2 LINE L1 5819 6581 -1 5 1842 239 314 0 0 chrX 164758900 164758970 -1891326 - ID_B1 SINE B4 -45 179 110 5 1842 311 311 94 28 chrX 164759041 164759253 -1891043 + L1MEd LINE L1 5134 5359 -787 5 1842 22 0 0 0 chrX 164759583 164759605 -1890691 + AT_rich Low_complexity Low_complexity 1 22 0 5 1842 213 364 11 33 chrX 164759638 164759729 -1890567 + B3 SINE B2 48 136 -80 5 1842 266 0 0 29 chrX 164759729 164759764 -1890532 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1842 570 86 0 0 chrX 164760044 164760125 -1890171 + (CA)n Simple_repeat Simple_repeat 2 82 0 5 1842 333 0 0 0 chrX 164761670 164761707 -1888589 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1842 375 23 0 0 chrX 164761708 164761752 -1888544 + (GA)n Simple_repeat Simple_repeat 2 45 0 5 1842 1568 223 27 24 chrX 164763773 164764109 -1886187 - ORR1D2 LTR MaLR 0 370 34 5 1842 754 185 14 14 chrX 164764131 164764279 -1886017 + B1_Mur2 SINE Alu 2 149 0 5 1842 1499 167 136 24 chrX 164764381 164764712 -1885584 + ORR1D1 LTR MaLR 3 370 -4 5 1842 501 62 0 0 chrX 164764732 164764797 -1885499 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1842 713 315 86 23 chrX 164764829 164765086 -1885210 - B4A SINE B4 -18 274 2 5 1842 290 284 154 20 chrX 164765709 164765910 -1884386 - MIR SINE MIR -30 232 5 5 1842 528 250 0 41 chrX 164766224 164766370 -1883926 + B1F2 SINE Alu 3 142 -7 5 1842 378 244 11 64 chrX 164766921 164767035 -1883261 - B1F SINE Alu -2 118 6 5 1842 224 319 37 112 chrX 164768297 164768431 -1881865 - PB1 SINE Alu -3 124 1 5 1842 314 269 13 0 chrX 164769268 164769346 -1880950 + ID4_ SINE ID 5 83 0 5 1842 782 244 9 32 chrX 164769382 164769598 -1880698 - B3 SINE B2 -5 211 1 5 1842 180 404 7 34 chrX 164770416 164770562 -1879734 + MIR SINE MIR 5 146 -116 5 1842 594 227 91 0 chrX 164772260 164772392 -1877904 + B1_Mur3 SINE Alu 1 144 -5 5 1842 686 155 16 0 chrX 164772392 164772521 -1877775 + GA-rich Low_complexity Low_complexity 3 133 0 5 1842 270 0 0 0 chrX 164772633 164772663 -1877633 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 5 1842 225 59 0 0 chrX 164772665 164772699 -1877597 - L1_Mus2 LINE L1 -10 6556 6523 5 1842 322 265 58 25 chrX 164772829 164772949 -1877347 + MLT1A1 LTR MaLR 19 142 -266 5 1842 207 100 0 0 chrX 164772994 164773024 -1877272 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 5 1842 828 307 85 15 chrX 164773159 164773500 -1876796 - MLT1A0 LTR MaLR 0 365 1 5 1842 432 0 0 0 chrX 164774414 164774462 -1875834 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 1842 189 0 0 0 chrX 164774469 164774490 -1875806 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 5 1842 399 326 74 92 chrX 164774555 164774893 -1875403 + MLT1D LTR MaLR 31 362 -143 5 1842 309 324 26 18 chrX 164775239 164775352 -1874944 + LTR78 LTR ERV1 569 682 -622 5 1842 563 284 46 17 chrX 164775445 164775624 -1874672 + ORR1E LTR MaLR 24 282 -97 5 1842 1603 166 40 37 chrX 164775624 164775950 -1874346 - ORR1A2 LTR MaLR 0 327 1 5 1842 531 220 20 66 chrX 164775950 164775972 -1874324 + ORR1E LTR MaLR 283 297 -82 5 1842 276 91 0 0 chrX 164775972 164776016 -1874280 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1842 531 220 20 66 chrX 164776016 164776097 -1874199 + ORR1E LTR MaLR 298 378 -1 5 1842 1731 206 30 16 chrX 164776142 164776507 -1873789 - ORR1D2 LTR MaLR 0 370 1 5 1842 297 325 224 6 chrX 164776593 164776763 -1873533 + LTR78 LTR ERV1 1082 1288 -16 5 1842 906 299 14 0 chrX 164777089 164777303 -1872993 + ID_B1 SINE B4 8 224 0 5 1842 495 48 0 0 chrX 164777755 164777817 -1872479 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 1842 330 250 107 53 chrX 164778418 164778472 -1871824 - B1F2 SINE Alu -3 146 94 5 1842 2238 104 10 3 chrX 164778472 164778779 -1871517 + RLTR27 LTR ERVK 1 309 0 5 1842 330 250 107 53 chrX 164778779 164778855 -1871441 - B1F2 SINE Alu -56 93 9 5 1842 503 267 109 7 chrX 164778983 164779130 -1871166 - ORR1D2 LTR MaLR 0 370 209 5 1842 499 304 66 7 chrX 164779388 164779524 -1870772 - ID_B1 SINE B4 -79 145 2 5 1842 240 35 0 0 chrX 164779780 164779809 -1870487 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1842 29200 114 16 10 chrX 164779822 164786175 -1864121 + L1_Mus1 LINE L1 173 6567 0 5 1842 618 202 70 0 chrX 164786260 164786389 -1863907 + B1_Mur1 SINE Alu 11 148 -1 5 1842 279 79 0 0 chrX 164787007 164787045 -1863251 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 5 1842 489 267 88 56 chrX 164787715 164787965 -1862331 + LTR37A LTR ERV1 166 423 -3 5 1842 863 281 10 0 chrX 164787965 164788168 -1862128 + ID_B1 SINE B4 2 206 -18 5 1842 640 272 6 12 chrX 164788834 164788994 -1861302 - ID_B1 SINE B4 -61 163 5 5 1842 780 129 0 0 chrX 164789211 164789335 -1860961 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 5 1842 1268 125 9 4 chrX 164789341 164789566 -1860730 - L1_Mus4 LINE L1 0 6636 6411 5 1842 1518 60 5 0 chrX 164789566 164789766 -1860530 + L1_Mus4 LINE L1 5994 6194 -442 5 1842 1069 319 7 10 chrX 164790167 164790435 -1859861 + B4A SINE B4 1 266 -26 5 1842 5007 102 129 16 chrX 164790435 164791249 -1859047 - RMER17A2 LTR ERVK 0 906 1 5 1842 1069 319 7 10 chrX 164791249 164791271 -1859025 + B4A SINE B4 267 289 -3 5 1842 308 155 14 0 chrX 164791277 164791348 -1858948 + (CA)n Simple_repeat Simple_repeat 1 72 0 5 1842 27 73 0 0 chrX 164791386 164791441 -1858855 + AT_rich Low_complexity Low_complexity 1 55 0 6 1842 737 244 89 30 chrX 164791441 164791644 -1858652 - B3 SINE B2 0 216 2 6 1842 701 280 65 89 chrX 164791679 164791743 -1858553 + MLT1A0 LTR MaLR 3 58 -307 6 1842 342 0 0 0 chrX 164791743 164791781 -1858515 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1842 701 280 65 89 chrX 164791781 164792088 -1858208 + MLT1A0 LTR MaLR 59 365 0 6 1842 663 197 62 49 chrX 164792106 164792250 -1858046 - B1_Mus1 SINE Alu -1 147 2 6 1842 23 0 0 0 chrX 164792291 164792314 -1857982 + AT_rich Low_complexity Low_complexity 1 23 0 6 1842 347 312 27 18 chrX 164792314 164792425 -1857871 - RSINE1 SINE B4 -7 158 47 6 1842 907 239 24 10 chrX 164792679 164792886 -1857410 - B3 SINE B2 -6 210 1 6 1842 321 260 85 94 chrX 164792980 164793086 -1857210 + B3 SINE B2 1 105 -111 6 1842 1416 232 55 55 chrX 164793088 164793591 -1856705 - MT2B LTR ERVL 0 601 1 6 1842 523 217 40 32 chrX 164793591 164793710 -1856586 + B3 SINE B2 92 211 -5 6 1842 206 281 9 37 chrX 164793999 164794106 -1856190 + GA-rich Low_complexity Low_complexity 1 104 0 6 1842 264 170 0 0 chrX 164794599 164794652 -1855644 + (TAG)n Simple_repeat Simple_repeat 1 53 0 6 1842 289 345 69 68 chrX 164794681 164794870 -1855426 + B3A SINE B2 20 215 -1 6 1842 474 292 112 31 chrX 164795122 164795345 -1854951 + RMER5 LTR ERV1 33 273 -261 6 1842 319 275 0 198 chrX 164795349 164795363 -1854933 + MER92B LTR ERV1 133 146 -490 6 1842 510 17 0 0 chrX 164795363 164795422 -1854874 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1842 319 275 0 198 chrX 164795422 164795579 -1854717 + MER92B LTR ERV1 147 270 -366 6 1842 258 185 25 177 chrX 164795717 164795796 -1854500 + RMER5 LTR ERV1 2 68 -466 6 1842 876 159 14 14 chrX 164795801 164795948 -1854348 + B1_Mur3 SINE Alu 3 149 0 6 1842 228 143 62 16 chrX 164795948 164796012 -1854284 + A-rich Low_complexity Low_complexity 1 67 0 6 1842 1716 243 46 18 chrX 164796013 164796469 -1853827 + RMER5 LTR ERV1 59 527 -7 6 1842 203 200 0 0 chrX 164797671 164797711 -1852585 - MER5A DNA MER1_type -120 69 30 6 1842 340 271 14 0 chrX 164798277 164798347 -1851949 - B4 SINE B4 -142 150 80 6 1842 28076 117 19 4 chrX 164798362 164804392 -1845904 + L1_Mus1 LINE L1 409 6537 -30 6 1842 183 100 0 0 chrX 164805015 164805045 -1845251 + (A)n Simple_repeat Simple_repeat 1 30 0 6 1842 840 230 36 0 chrX 164805081 164805246 -1845050 + B3 SINE B2 3 173 -43 6 1842 1947 206 6 19 chrX 164805252 164805613 -1844683 + MTC LTR MaLR 1 356 -65 6 1842 452 272 52 9 chrX 164805827 164805942 -1844354 - RSINE1 SINE B4 -8 157 38 6 1842 233 231 0 58 chrX 164806011 164806080 -1844216 - Charlie15a DNA MER1_type 0 224 160 6 1842 430 296 60 71 chrX 164806860 164807024 -1843272 + B3A SINE B2 3 168 -30 6 1842 390 108 0 0 chrX 164807024 164807089 -1843207 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 6 1842 430 296 60 71 chrX 164807089 164807106 -1843190 + B3A SINE B2 169 182 -16 6 1842 608 178 85 8 chrX 164807392 164807522 -1842774 - MLT2B2 LTR ERVL -375 140 1 6 1842 230 368 52 21 chrX 164807604 164807701 -1842595 - MLT1I LTR MaLR -251 160 61 6 1842 391 328 92 0 chrX 164807899 164808030 -1842266 - B1F2 SINE Alu -6 143 1 6 1842 740 212 179 27 chrX 164808260 164808444 -1841852 + B3 SINE B2 1 212 -4 6 1842 221 278 55 94 chrX 164808467 164808594 -1841702 + MIR SINE MIR 104 225 -37 6 1842 1224 273 56 25 chrX 164809012 164809369 -1840927 - ORR1D2 LTR MaLR -2 368 1 6 1842 499 323 15 0 chrX 164809714 164809847 -1840449 + B1_Mur1 SINE Alu 2 136 -13 6 1842 465 19 0 0 chrX 164809848 164809902 -1840394 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1842 250 26 51 0 chrX 164809927 164809966 -1840330 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 6 1842 556 315 14 14 chrX 164809973 164810121 -1840175 - RSINE1 SINE B4 -15 150 3 6 1842 641 305 59 17 chrX 164810126 164810363 -1839933 + RMER5 LTR ERV1 52 298 -236 6 1842 1029 224 19 5 chrX 164810492 164810698 -1839598 + B3 SINE B2 2 210 -6 6 1842 230 250 108 15 chrX 164810718 164810783 -1839513 + PB1 SINE Alu 54 124 -3 6 1842 185 94 31 0 chrX 164811020 164811052 -1839244 + (TTG)n Simple_repeat Simple_repeat 3 35 0 6 1842 234 0 0 0 chrX 164811060 164811086 -1839210 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 1842 4172 106 64 3 chrX 164812128 164812771 -1837525 - L1_Mus4 LINE L1 -2 6634 5953 6 1842 6213 146 1 1 chrX 164812773 164813858 -1836438 + L1_Mur2 LINE L1 3075 4159 -1718 6 1842 512 274 189 6 chrX 164815111 164815291 -1835005 + ID_B1 SINE B4 1 213 -11 6 1842 298 315 11 11 chrX 164815657 164815750 -1834546 - PB1D9 SINE Alu -2 118 26 6 1842 248 231 47 82 chrX 164815776 164815861 -1834435 - PB1D10 SINE Alu -22 95 14 6 1842 672 238 46 59 chrX 164816182 164816334 -1833962 + RSINE1 SINE B4 16 165 0 6 1842 180 111 0 0 chrX 164816334 164816361 -1833935 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 1842 326 23 23 0 chrX 164817241 164817284 -1833012 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1842 421 270 20 0 chrX 164817771 164817871 -1832425 - RSINE1 SINE B4 -31 134 33 6 1842 1352 129 4 39 chrX 164818916 164819149 -1831147 - URR1A DNA MER1_type -1 225 1 6 1842 499 157 0 0 chrX 164819279 164819368 -1830928 + L1_Mus1 LINE L1 227 315 -6323 6 1842 28455 68 5 4 chrX 164819364 164820112 -1830184 + L1_Mus1 LINE L1 639 1387 -4496 6 1842 6517 6 0 0 chrX 164820112 164820830 -1829466 + L1Md_T LINE L1 5865 6582 0 6 1842 28455 84 45 47 chrX 164820830 164824221 -1826075 + L1_Mus1 LINE L1 1388 4747 -1136 6 1842 1633 90 4 4 chrX 164824221 164824456 -1825840 + L1Md_F2 LINE L1 6348 6582 0 6 1842 28455 87 29 30 chrX 164824456 164826225 -1824071 + L1_Mus1 LINE L1 4748 6539 -28 6 1842 518 29 15 0 chrX 164826227 164826295 -1824001 + (TA)n Simple_repeat Simple_repeat 2 70 0 6 1842 251 204 0 36 chrX 164826313 164826369 -1823927 + B1_Mur1 SINE Alu 86 139 -10 6 1842 201 351 78 17 chrX 164826820 164826936 -1823360 + MIRb SINE MIR 75 197 -71 6 1842 470 282 86 0 chrX 164828297 164828414 -1821882 + B1_Mur1 SINE Alu 1 127 -22 6 1842 624 14 0 0 chrX 164828418 164828491 -1821805 + (TC)n Simple_repeat Simple_repeat 2 74 0 6 1842 2649 165 57 2 chrX 164828495 164829006 -1821290 - Lx4B LINE L1 -574 6484 5946 6 1842 3281 75 0 5 chrX 164829014 164829440 -1820856 - L1Md_F2 LINE L1 -8 6574 6151 6 1842 2489 148 76 42 chrX 164829445 164829946 -1820350 + Lx4B LINE L1 6525 7042 -16 6 1842 342 45 0 0 chrX 164829946 164829990 -1820306 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 6 1842 629 224 16 8 chrX 164830233 164830359 -1819937 - RSINE1 SINE B4 -36 129 3 6 1842 737 304 28 5 chrX 164831105 164831320 -1818976 - ID_B1 SINE B4 -4 220 1 6 1842 231 355 0 53 chrX 164831328 164831423 -1818873 + MER20 DNA MER1_type 6 95 -124 6 1842 550 314 131 10 chrX 164832565 164832855 -1817441 + Lx8 LINE L1 6797 7121 -352 6 1842 418 176 95 0 chrX 164832983 164833057 -1817239 + B3 SINE B2 1 81 -135 6 1842 202 135 27 0 chrX 164833564 164833601 -1816695 + A-rich Low_complexity Low_complexity 6 43 0 6 1842 32320 79 2 1 chrX 164833661 164839677 -1810619 - L1Md_F2 LINE L1 -3 6579 554 6 1842 185 375 44 22 chrX 164839756 164839846 -1810450 + L2c LINE L2 2999 3090 -297 6 1842 837 253 11 23 chrX 164840005 164840179 -1810117 + B3A SINE B2 1 172 -26 6 1842 381 22 0 0 chrX 164840184 164840230 -1810066 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1842 729 229 0 77 chrX 164840230 164840414 -1809882 + RMER10B LTR ERVL 229 398 0 6 1842 2237 167 89 75 chrX 164840458 164840975 -1809321 + RLTR28 LTR ERVL 1 524 0 6 1842 305 329 97 24 chrX 164840981 164841146 -1809150 - MIR SINE MIR -55 207 31 6 1842 770 212 0 0 chrX 164841816 164841953 -1808343 - B1_Mur4 SINE Alu -13 137 1 6 1842 428 212 5 0 chrX 164842713 164842808 -1807488 + ID4_ SINE ID 9 105 -47 6 1842 7231 30 0 0 chrX 164842894 164843739 -1806557 - L1Md_A LINE L1 -1 6581 5737 6 1842 12734 21 0 0 chrX 164843739 164845285 -1805011 + L1Md_A LINE L1 4192 5737 -146 6 1842 1292 219 22 44 chrX 164845285 164845605 -1804691 - RLTR28B LTR ERVL -168 313 1 6 1842 357 312 19 118 chrX 164846782 164847105 -1803191 + B4A SINE B4 1 291 -1 6 1842 227 259 24 36 chrX 164847132 164847216 -1803080 + CT-rich Low_complexity Low_complexity 2 84 0 6 1842 437 304 27 0 chrX 164847238 164847350 -1802946 - B3 SINE B2 -1 215 101 6 1842 1431 50 0 0 chrX 164847373 164847553 -1802743 + (TCC)n Simple_repeat Simple_repeat 1 180 0 6 1842 357 254 167 0 chrX 164847599 164847725 -1802571 - B1F2 SINE Alu 0 149 3 6 1842 4841 165 47 138 chrX 164847749 164847873 -1802423 + L1_Mur3 LINE L1 3945 4073 -1807 6 1842 3280 38 8 0 chrX 164847873 164848266 -1802030 - MTA_Mm LTR MaLR 0 396 1 6 1842 4841 165 47 138 chrX 164848266 164848875 -1801421 + L1_Mur3 LINE L1 4074 4680 -1200 6 1842 821 204 14 0 chrX 164848875 164849017 -1801279 + B1_Mur4 SINE Alu 7 150 0 6 1842 4841 165 47 138 chrX 164849017 164849704 -1800592 + L1_Mur3 LINE L1 4681 5366 -514 6 1842 565 194 0 0 chrX 164849699 164849807 -1800489 + Lx7 LINE L1 7252 7359 -337 6 1842 214 291 14 14 chrX 164849821 164849964 -1800332 + T-rich Low_complexity Low_complexity 2 144 0 6 1842 277 261 0 0 chrX 164850006 164850075 -1800221 + Lx7 LINE L1 7615 7683 -13 6 1842 540 316 18 37 chrX 164850164 164850328 -1799968 - RSINE1 SINE B4 -2 163 3 6 1842 357 62 0 0 chrX 164850364 164850412 -1799884 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1842 257 242 76 0 chrX 164850417 164850483 -1799813 - ID_B1 SINE B4 -6 218 148 6 1842 186 43 0 0 chrX 164850501 164850524 -1799772 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 1842 1185 29 0 0 chrX 164850727 164850864 -1799432 + B1_Mus1 SINE Alu 1 137 -11 6 1842 319 21 20 20 chrX 164850865 164850914 -1799382 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 6 1842 493 279 0 35 chrX 164851531 164851646 -1798650 - B3 SINE B2 -3 213 103 6 1842 658 327 70 5 chrX 164851678 164851878 -1798418 + MER58A DNA MER1_type 12 224 0 7 1842 324 245 133 0 chrX 164851957 164852055 -1798241 + L1MD LINE L1 3561 3671 -2475 7 1842 3369 147 8 0 chrX 164852056 164852567 -1797729 + RMER20A LTR ERVK 1 515 -1 7 1842 303 292 28 84 chrX 164852665 164852807 -1797489 + B1F2 SINE Alu 2 135 -14 7 1842 344 331 51 29 chrX 164852850 164852987 -1797309 + B1F2 SINE Alu 10 149 0 7 1842 22 0 0 0 chrX 164852987 164853009 -1797287 + AT_rich Low_complexity Low_complexity 1 22 0 7 1842 453 115 0 0 chrX 164853299 164853386 -1796910 + (CA)n Simple_repeat Simple_repeat 2 88 0 7 1842 504 32 0 0 chrX 164853386 164853447 -1796849 + (GA)n Simple_repeat Simple_repeat 2 63 0 7 1842 610 284 6 55 chrX 164854090 164854306 -1795990 + MLT1A0 LTR MaLR 1 198 -210 7 1842 397 291 94 101 chrX 164854418 164854596 -1795700 + L1M4b LINE L1 1358 1534 -5800 7 1842 729 192 184 11 chrX 164854596 164854775 -1795521 + B3 SINE B2 2 211 -5 7 1842 397 291 94 101 chrX 164854775 164854936 -1795360 + L1M4b LINE L1 1535 1677 -5657 7 1842 764 186 175 5 chrX 164854936 164855125 -1795171 + URR1B DNA MER1_type 5 225 0 7 1842 397 291 94 101 chrX 164855125 164855208 -1795088 + L1M4b LINE L1 1678 1777 -5557 7 1842 647 250 81 0 chrX 164855635 164855771 -1794525 + B1_Mur1 SINE Alu 1 147 -2 7 1842 894 299 13 18 chrX 164856265 164856490 -1793806 + B4A SINE B4 5 228 -64 7 1842 669 188 86 0 chrX 164856495 164856623 -1793673 + B1_Mur3 SINE Alu 10 148 -1 7 1842 360 0 0 0 chrX 164856724 164856764 -1793532 + (GA)n Simple_repeat Simple_repeat 2 41 0 7 1842 351 0 0 0 chrX 164857594 164857633 -1792663 + (A)n Simple_repeat Simple_repeat 1 39 0 7 1842 422 285 22 37 chrX 164857673 164857808 -1792488 - MTEa LTR MaLR -3 376 244 7 1842 453 268 88 9 chrX 164857848 164857961 -1792335 - MTEa LTR MaLR -257 122 1 7 1842 583 259 374 22 chrX 164857973 164858184 -1792112 + ORR1E LTR MaLR 1 285 -94 7 1842 189 0 0 0 chrX 164858233 164858254 -1792042 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 7 1842 434 365 29 25 chrX 164858629 164858873 -1791423 + MLT1A LTR MaLR 173 408 0 7 1842 238 217 83 0 chrX 164859932 164859992 -1790304 + L2 LINE L2 2497 2561 -858 7 1842 305 250 20 129 chrX 164860084 164860098 -1790198 + MT2B LTR ERVL 151 153 -448 7 1842 554 261 0 25 chrX 164860098 164860220 -1790076 + PB1D9 SINE Alu 1 119 -1 7 1842 714 159 0 0 chrX 164860223 164860349 -1789947 + GA-rich Low_complexity Low_complexity 1 126 0 7 1842 916 214 39 34 chrX 164860472 164860680 -1789616 - MTC LTR MaLR -9 412 204 7 1842 1062 180 237 0 chrX 164860653 164860898 -1789398 - ORR1C2 LTR MaLR -81 303 1 7 1842 264 30 0 0 chrX 164861347 164861380 -1788916 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 7 1842 1367 266 30 41 chrX 164861397 164861724 -1788572 + MTEa LTR MaLR 20 343 -36 7 1842 2141 91 65 3 chrX 164861724 164862032 -1788264 + ORR1A2 LTR MaLR 1 327 0 7 1842 1367 266 30 41 chrX 164862032 164862068 -1788228 + MTEa LTR MaLR 344 379 0 7 1842 858 306 32 4 chrX 164862121 164862367 -1787929 - MTC LTR MaLR -126 253 1 7 1842 536 300 6 169 chrX 164863015 164863352 -1786944 + B4 SINE B4 3 284 -8 7 1842 271 227 0 51 chrX 164863415 164863494 -1786802 - L1ME2 LINE L1 -230 5934 5860 7 1842 1602 195 0 11 chrX 164863577 164863857 -1786439 + ORR1D1 LTR MaLR 1 277 -97 7 1842 303 192 13 40 chrX 164863845 164863921 -1786375 - MLT1A0 LTR MaLR -33 341 268 7 1842 556 277 42 21 chrX 164863941 164864133 -1786163 - MLT1A0 LTR MaLR -167 198 3 7 1842 382 250 216 45 chrX 164864919 164865095 -1785201 - B3 SINE B2 -10 206 1 7 1842 258 135 58 0 chrX 164865279 164865331 -1784965 - ID4 SINE ID -24 59 5 7 1842 215 125 42 0 chrX 164865413 164865461 -1784835 + (TCTCTG)n Simple_repeat Simple_repeat 5 54 0 7 1842 354 23 0 0 chrX 164865461 164865504 -1784792 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 7 1842 298 305 36 72 chrX 164865762 164865900 -1784396 + MT2B LTR ERVL 126 258 -343 7 1842 618 211 36 43 chrX 164865808 164865947 -1784349 + B1_Mur3 SINE Alu 11 148 -1 7 1842 898 228 66 0 chrX 164866071 164866268 -1784028 + B3 SINE B2 2 211 -5 7 1842 216 196 0 0 chrX 164866442 164866488 -1783808 + T-rich Low_complexity Low_complexity 4 49 0 7 1842 384 165 22 11 chrX 164866523 164866615 -1783681 + CT-rich Low_complexity Low_complexity 1 93 0 7 1842 435 68 0 0 chrX 164866618 164866677 -1783619 + (TG)n Simple_repeat Simple_repeat 2 60 0 7 1842 526 304 30 0 chrX 164866678 164866813 -1783483 - B3A SINE B2 -57 141 3 7 1842 500 321 82 26 chrX 164867061 164867256 -1783040 - MIRb SINE MIR -8 260 55 7 1842 520 280 2 4 chrX 164868230 164868373 -1781923 + B1F SINE Alu 6 147 -2 7 1842 762 32 0 0 chrX 164868374 164868467 -1781829 + (GGAA)n Simple_repeat Simple_repeat 4 96 0 7 1842 738 318 22 22 chrX 164868490 164868712 -1781584 + ID_B1 SINE B4 3 224 0 7 1842 210 339 0 0 chrX 164869086 164869142 -1781154 + MIR SINE MIR 76 131 -77 7 1842 566 328 93 54 chrX 164869201 164869697 -1780599 + MLT1H2 LTR MaLR 1 484 -5 7 1842 24 32 0 0 chrX 164869780 164869811 -1780485 + AT_rich Low_complexity Low_complexity 1 31 0 7 1842 938 256 10 25 chrX 164869861 164870065 -1780231 + B3 SINE B2 1 201 -15 7 1842 324 0 0 0 chrX 164870068 164870104 -1780192 + (TAAAA)n Simple_repeat Simple_repeat 4 39 0 7 1842 791 285 29 24 chrX 164872021 164872226 -1778070 + ID_B1 SINE B4 2 207 -17 7 1842 228 111 0 0 chrX 164872682 164872718 -1777578 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 1842 272 368 6 94 chrX 164872872 164873043 -1777253 + RMER4A LTR ERVK 8 163 -303 7 1842 327 157 0 0 chrX 164873194 164873245 -1777051 - B3A SINE B2 -144 54 4 7 1842 1586 171 88 59 chrX 164873291 164873664 -1776632 + ORR1C2 LTR MaLR 1 384 0 7 1842 993 230 9 5 chrX 164874234 164874448 -1775848 + B3 SINE B2 1 215 -1 7 1842 1634 176 102 9 chrX 164874490 164874834 -1775462 - ORR1C1 LTR MaLR -1 377 2 7 1842 899 251 5 27 chrX 164874996 164875217 -1775079 + B3 SINE B2 1 216 0 7 1842 928 224 90 40 chrX 164875271 164875694 -1774602 - L1MB2 LINE L1 -19 6164 5672 7 1842 1310 295 54 7 chrX 164876314 164876775 -1773521 - RMER5 LTR ERV1 0 534 52 7 1842 201 222 0 0 chrX 164876809 164876845 -1773451 + polypyrimidine Low_complexity Low_complexity 4 39 0 7 1842 628 228 79 0 chrX 164877529 164877656 -1772640 + B1_Mur1 SINE Alu 12 148 -1 7 1842 378 304 0 45 chrX 164877669 164877801 -1772495 - RSINE1 SINE B4 -169 123 3 7 1842 297 0 0 0 chrX 164877817 164877850 -1772446 + (CTTG)n Simple_repeat Simple_repeat 4 36 0 7 1842 252 217 267 0 chrX 164877851 164877911 -1772385 - ID2 SINE ID -6 77 2 7 1842 526 319 139 45 chrX 164877976 164878400 -1771896 + Lx8 LINE L1 6912 7375 -98 7 1842 23 0 0 0 chrX 164878470 164878493 -1771803 + AT_rich Low_complexity Low_complexity 1 23 0 7 1842 631 316 4 77 chrX 164878990 164879223 -1771073 + B3 SINE B2 1 216 0 7 1842 684 137 50 128 chrX 164879719 164879908 -1770388 + ORR1C1 LTR MaLR 1 186 -188 7 1842 537 96 32 0 chrX 164879908 164880002 -1770294 + (TC)n Simple_repeat Simple_repeat 1 97 0 7 1842 1259 181 5 0 chrX 164880002 164880212 -1770084 + ORR1C1 LTR MaLR 166 376 -2 7 1842 213 178 0 0 chrX 164880460 164880505 -1769791 + (CAGAGA)n Simple_repeat Simple_repeat 4 48 0 7 1842 324 377 7 27 chrX 164880635 164880785 -1769511 - B4 SINE B4 -136 156 10 7 1842 515 269 7 40 chrX 164881103 164881120 -1769176 + ID_B1 SINE B4 73 218 -6 7 1842 817 172 0 0 chrX 164881120 164881254 -1769042 + B1_Mur2 SINE Alu 10 143 -6 7 1842 468 266 78 65 chrX 164881251 164881404 -1768892 + B3 SINE B2 48 202 -14 7 1842 339 25 0 0 chrX 164881405 164881445 -1768851 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 7 1842 739 259 71 12 chrX 164881457 164881625 -1768671 - B3 SINE B2 -6 210 33 7 1842 977 232 190 26 chrX 164881909 164882214 -1768082 + MTE2b LTR MaLR 18 372 -7 7 1842 846 87 16 0 chrX 164882317 164882444 -1767852 - L1Md_F3 LINE L1 -14 6570 6442 7 1842 464 254 8 106 chrX 164882447 164882570 -1767726 - B1_Mur1 SINE Alu -21 128 18 7 1842 265 272 46 46 chrX 164882601 164882709 -1767587 - L1M5 LINE L1 -554 5625 5518 7 1842 1830 140 7 10 chrX 164882710 164883013 -1767283 + L1_Mus3 LINE L1 6332 6633 -5 7 1842 324 293 13 0 chrX 164883215 164883290 -1767006 - ID4_ SINE ID -7 76 1 7 1842 515 287 14 72 chrX 164884133 164884272 -1766024 + ID_B1 SINE B4 78 208 -16 7 1842 423 0 0 0 chrX 164884478 164884525 -1765771 + (TTA)n Simple_repeat Simple_repeat 2 48 0 7 1842 642 26 0 0 chrX 164886077 164886153 -1764143 + (GA)n Simple_repeat Simple_repeat 1 76 0 7 1842 477 320 57 57 chrX 164886888 164887100 -1763196 - MER20 DNA MER1_type -7 212 1 7 1842 339 295 54 54 chrX 164888361 164888547 -1761749 - Lx8 LINE L1 -1548 5925 5737 7 230 1138 207 13 18 chrX 164888547 164888773 -1761523 + URR1B DNA MER1_type 1 225 0 7 1843 339 295 54 54 chrX 164888773 164888826 -1761470 - Lx8 LINE L1 -1737 5736 5686 7 1843 874 329 39 0 chrX 164888956 164889190 -1761106 - B4A SINE B4 -48 244 2 7 1843 259 341 0 43 chrX 164889202 164889294 -1761002 - Lx7 LINE L1 -2010 5686 5599 7 1843 343 234 65 0 chrX 164889541 164889618 -1760678 - ID SINE ID -142 82 1 7 1843 8082 85 20 6 chrX 164889912 164891670 -1758626 + L1VL4 LINE L1 213 1999 -1560 7 1843 2406 186 9 5 chrX 164891670 164892096 -1758200 + Lx LINE L1 6227 6654 0 7 1843 645 192 205 0 chrX 164892100 164892256 -1758040 - URR1B DNA MER1_type -37 188 1 7 1843 349 280 93 31 chrX 164892411 164892573 -1757723 - L1M5 LINE L1 -854 5292 5121 7 1843 414 0 0 0 chrX 164892898 164892944 -1757352 + (TC)n Simple_repeat Simple_repeat 2 47 0 8 1843 333 0 0 0 chrX 164892944 164892980 -1757316 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 1843 383 331 22 38 chrX 164893015 164893200 -1757096 - L1M5 LINE L1 -1190 4956 4775 7 1843 579 29 0 0 chrX 164893384 164893453 -1756843 + (TG)n Simple_repeat Simple_repeat 2 70 0 8 1843 611 0 27 0 chrX 164893487 164893561 -1756735 + (TTTTG)n Simple_repeat Simple_repeat 5 80 0 8 1843 666 179 0 71 chrX 164893561 164893687 -1756609 - B1_Mur4 SINE Alu -14 136 20 8 1843 669 291 79 9 chrX 164894216 164894545 -1755751 - L1M5 LINE L1 -1437 4709 4358 7 1843 7046 79 30 20 chrX 164895125 164896447 -1753849 - L1_Mus2 LINE L1 -1 6565 5233 8 1843 927 27 0 0 chrX 164896447 164896557 -1753739 + (TCTA)n Simple_repeat Simple_repeat 3 112 0 8 1843 5673 100 28 6 chrX 164896557 164896724 -1753572 - L1_Mus2 LINE L1 -651 5232 5051 8 1843 281 47 23 0 chrX 164896973 164897016 -1753280 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 8 1843 1116 85 0 21 chrX 164897019 164897164 -1753132 - B1_Mus1 SINE Alu -6 142 1 8 1843 368 260 21 0 chrX 164898383 164898479 -1751817 - ID_B1 SINE B4 -3 221 124 8 1843 345 292 186 0 chrX 164898479 164898592 -1751704 - B3 SINE B2 -82 134 1 8 1843 304 301 76 19 chrX 164898821 164898926 -1751370 - PB1D10 SINE Alu -2 115 5 8 1843 291 313 215 35 chrX 164899214 164899386 -1750910 + ID_B1 SINE B4 2 204 -20 8 1843 228 67 0 0 chrX 164899598 164899628 -1750668 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 1843 277 300 0 91 chrX 164899639 164899697 -1750599 - RSINE1 SINE B4 0 165 110 8 1843 1630 221 87 8 chrX 164899697 164900053 -1750243 - ORR1C2 LTR MaLR 0 384 1 8 1843 388 339 82 78 chrX 164900053 164900301 -1749995 - B4 SINE B4 -37 255 5 8 1843 361 280 32 0 chrX 164900310 164900403 -1749893 - B4A SINE B4 -195 97 2 8 1843 561 313 95 0 chrX 164900469 164900616 -1749680 + B3 SINE B2 1 161 -55 8 1843 443 73 15 0 chrX 164900618 164900686 -1749610 + (CA)n Simple_repeat Simple_repeat 2 70 0 8 1843 1099 111 0 7 chrX 164900996 164901177 -1749119 - L1_Mus1 LINE L1 0 6567 6411 8 1843 1163 205 24 0 chrX 164901978 164902188 -1748108 + B3 SINE B2 2 216 0 8 1843 186 276 52 0 chrX 164902202 164902260 -1748036 - MIR3 SINE MIR -29 179 119 8 1843 433 229 91 8 chrX 164902464 164902596 -1747700 + RMER19B LTR ERVK 741 883 -19 8 1843 1047 305 45 21 chrX 164902594 164902972 -1747324 + MT2A LTR ERVL 138 524 -9 8 1843 193 244 0 15 chrX 164903242 164903280 -1747016 + polypyrimidine Low_complexity Low_complexity 95 132 0 8 1843 477 34 0 0 chrX 164903280 164903339 -1746957 + (TG)n Simple_repeat Simple_repeat 2 60 0 8 1843 193 244 0 15 chrX 164903339 164903433 -1746863 + CT-rich Low_complexity Low_complexity 3 94 0 8 1843 720 186 116 50 chrX 164903462 164903660 -1746636 + ORR1D1 LTR MaLR 164 374 0 8 1843 33333 77 24 9 chrX 164903680 164908133 -1742163 - L1Md_F2 LINE L1 -12 6570 2035 8 1843 3132 52 7 68 chrX 164908133 164908546 -1741750 - RLTR10 LTR ERVK -2 388 1 8 1843 33333 105 44 6 chrX 164908546 164910135 -1740161 - L1Md_F2 LINE L1 -3849 2034 392 8 1843 466 133 13 0 chrX 164910922 164910997 -1739299 - URR1B DNA MER1_type 0 225 150 8 1843 10069 87 17 7 chrX 164910997 164912510 -1737786 + Lx3_Mus LINE L1 5480 7009 0 8 1843 24 32 0 0 chrX 164912510 164912541 -1737755 + AT_rich Low_complexity Low_complexity 1 31 0 8 1843 1626 83 0 4 chrX 164912547 164912771 -1737525 - L1_Mm LINE L1 -4327 1556 1333 8 1843 8376 31 2 5 chrX 164912771 164913710 -1736586 + L1Md_F2 LINE L1 5644 6579 -3 8 1843 698 272 47 28 chrX 164913724 164913936 -1736360 + Lx7 LINE L1 6578 6793 -903 8 1843 13149 143 30 41 chrX 164913940 164913971 -1736325 + Lx4B LINE L1 3461 3480 -2397 8 1843 201 74 0 0 chrX 164913971 164913998 -1736298 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 8 1843 13149 143 30 41 chrX 164913998 164916225 -1734071 + Lx4B LINE L1 3481 5693 -184 8 1843 6621 126 20 5 chrX 164916225 164917169 -1733127 + RMER17B LTR ERVK 1 958 0 8 1843 13149 199 35 21 chrX 164917169 164918431 -1731865 + Lx4B LINE L1 5694 6980 -20 8 1843 395 314 86 0 chrX 164918496 164918636 -1731660 - MER58A DNA MER1_type -13 211 60 8 1843 541 226 85 0 chrX 164919003 164919109 -1731187 + PB1D9 SINE Alu 2 116 -4 8 1843 385 265 29 19 chrX 164919213 164919317 -1730979 + ID_B1 SINE B4 111 215 -9 8 1843 453 253 84 0 chrX 164920075 164920170 -1730126 + RSINE1 SINE B4 3 105 -60 8 1843 690 218 13 45 chrX 164920499 164920653 -1729643 + B1_Mur1 SINE Alu 1 149 0 8 1843 2757 162 26 64 chrX 164920763 164921297 -1728999 + RMER20A LTR ERVK 1 514 -2 8 1843 338 286 20 0 chrX 164922066 164922164 -1728132 + Charlie7 DNA MER1_type 317 416 -2196 8 1843 251 264 0 0 chrX 164922306 164922359 -1727937 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 1843 684 250 0 28 chrX 164922537 164922681 -1727615 - B1F2 SINE Alu -9 140 1 8 1843 27 62 0 0 chrX 164922785 164922833 -1727463 + AT_rich Low_complexity Low_complexity 1 48 0 8 1843 824 276 56 25 chrX 164923030 164923349 -1726947 + L1_Mur3 LINE L1 817 1145 -6583 8 1843 684 185 318 7 chrX 164923369 164923658 -1726638 + L1_Mur3 LINE L1 1852 2230 -3650 8 1843 6021 69 10 17 chrX 164923659 164924466 -1725830 + RLTR13C2 LTR ERVK 8 808 0 8 1843 1438 156 16 225 chrX 164924466 164924706 -1725590 + L1_Mur3 LINE L1 3125 3352 -2528 8 1843 700 122 0 0 chrX 164924706 164924804 -1725492 + B1_Mm SINE Alu 1 98 -49 8 1843 1438 156 16 225 chrX 164924804 164925044 -1725252 + L1_Mur3 LINE L1 3353 3581 -2299 8 1843 1521 85 10 0 chrX 164925240 164925439 -1724857 + L1_Mus1 LINE L1 6367 6567 0 8 1843 478 211 12 205 chrX 164925466 164925627 -1724669 - RLTR25B LTR ERVK -302 726 597 8 1843 1688 223 98 68 chrX 164926159 164926597 -1723699 - RLTR25B LTR ERVK -577 451 1 8 1843 3019 155 60 2 chrX 164926599 164927135 -1723161 + L1_Mur3 LINE L1 3674 4240 -1640 8 1843 1212 221 48 65 chrX 164927134 164927251 -1723045 + Lx6 LINE L1 5753 5856 -1604 8 1843 3185 78 5 2 chrX 164927251 164927650 -1722646 - MTB LTR MaLR 0 400 1 8 1843 1212 221 48 65 chrX 164927650 164927904 -1722392 + Lx6 LINE L1 5857 6118 -1342 8 1843 911 266 26 25 chrX 164927903 164928216 -1722080 + Lx6 LINE L1 6220 6751 -709 8 1843 1586 81 326 12 chrX 164928225 164928546 -1721750 - BGLII LTR ERVK 0 422 1 8 1843 2366 95 30 3 chrX 164928563 164928902 -1721394 - L1Md_A LINE L1 0 6582 6235 8 1843 1849 309 9 13 chrX 164928902 164929430 -1720866 + Lx5 LINE L1 6508 7033 -17 8 1843 304 135 0 71 chrX 164929492 164929548 -1720748 + HAL1-3A_ME LINE L1 1967 2018 -840 8 1843 195 42 0 0 chrX 164929548 164929572 -1720724 + (CATA)n Simple_repeat Simple_repeat 3 26 0 8 1843 267 315 46 66 chrX 164929638 164929835 -1720461 + Charlie7 DNA MER1_type 658 850 -1762 8 1843 223 378 0 35 chrX 164929973 164930058 -1720238 - ID4 SINE ID 0 83 2 8 1843 536 210 107 14 chrX 164930456 164930596 -1719700 + ID_B1 SINE B4 4 156 -68 8 1843 410 305 104 86 chrX 164930597 164930767 -1719529 + B4A SINE B4 1 169 -123 8 1843 3024 149 21 78 chrX 164930767 164931328 -1718968 + RLTR24 LTR ERV1 1 529 0 8 1843 410 305 104 86 chrX 164931328 164931367 -1718929 + B4A SINE B4 170 214 -78 8 1843 1171 101 0 0 chrX 164931367 164931515 -1718781 + B1_Mus1 SINE Alu 1 148 0 8 1843 410 305 104 86 chrX 164931515 164931526 -1718770 + B4A SINE B4 215 225 -67 8 1843 5829 105 45 1 chrX 164931526 164933020 -1717276 + L1Md_F LINE L1 415 1962 -3921 8 1843 405 0 0 0 chrX 164933020 164933065 -1717231 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 1843 5829 84 21 1 chrX 164933065 164933150 -1717146 + L1Md_F LINE L1 1963 2062 -3821 8 1843 5615 68 1 18 chrX 164933152 164934197 -1716099 + L1Md_A LINE L1 1 752 -5972 8 1843 34896 7 0 0 chrX 164934186 164939286 -1711010 + L1Md_A LINE L1 1 5100 -783 8 1843 6492 1 0 0 chrX 164939286 164939958 -1710338 + L1Md_A LINE L1 5911 6582 0 8 1843 8106 74 0 0 chrX 164939960 164941027 -1709269 + L1_Mm LINE L1 2034 3100 -2783 8 1843 481 250 70 0 chrX 164941578 164941706 -1708590 - ID_B1 SINE B4 -7 217 81 8 1843 3667 77 0 0 chrX 164941780 164942221 -1708075 + L1_Mus2 LINE L1 6126 6566 0 8 1843 1504 250 98 17 chrX 164942318 164942786 -1707510 + RMER20A LTR ERVK 11 516 0 8 1843 290 253 34 57 chrX 164942813 164942901 -1707395 + B1_Mur1 SINE Alu 59 144 -5 8 1843 469 169 0 0 chrX 164942826 164942903 -1707393 + ID_B1 SINE B4 145 221 -3 8 1843 1073 146 122 9 chrX 164942904 164943118 -1707178 + RLTR42 LTR ERVK 1 238 -1 8 1843 423 204 47 28 chrX 164943190 164943296 -1707000 + RLTR42-int LTR ERVK 99 206 -5316 8 1843 1622 268 90 75 chrX 164943854 164944645 -1705651 + RLTR42-int LTR ERVK 211 1013 -4509 8 1843 5479 107 28 63 chrX 164944651 164945667 -1704629 + ETnERV2-int LTR ERVK 151 1130 -3714 8 1843 2480 125 36 57 chrX 164945690 164946350 -1703946 + ETnERV2-int LTR ERVK 1721 2187 -2657 8 1843 4935 138 38 16 chrX 164946875 164948531 -1701765 + ETnERV2-int LTR ERVK 2356 4085 -3321 8 1843 6253 131 19 38 chrX 164948500 164949561 -1700735 + ETnERV2-int LTR ERVK 6127 7167 -239 8 1843 603 216 71 12 chrX 164949561 164949735 -1700561 + RLTR13B1 LTR ERVK 127 301 -601 8 1843 237 174 141 28 chrX 164949759 164949830 -1700466 + RLTR13B1 LTR ERVK 459 537 -365 8 1843 378 130 0 49 chrX 164949830 164949911 -1700385 + ETnERV2-int LTR ERVK 7329 7405 -1 8 1843 1075 208 81 116 chrX 164949912 164950319 -1699977 + RLTR9C LTR ERVK 1 393 0 8 1843 680 175 15 0 chrX 164950319 164950456 -1699840 + RLTR42-int LTR ERVK 1028 1166 -4356 8 1843 5694 127 29 13 chrX 164950459 164951066 -1699230 - Lx LINE L1 -701 5953 5290 8 1843 2904 93 2 0 chrX 164951066 164951462 -1698834 - L1Md_F2 LINE L1 -13 6569 6173 8 1843 5694 176 52 27 chrX 164951462 164952172 -1698124 - Lx LINE L1 -597 5289 4604 8 1843 4662 48 17 5 chrX 164952203 164952788 -1697508 - L1Md_F2 LINE L1 0 6582 5991 8 1843 8264 38 0 1 chrX 164952788 164953829 -1696467 + L1_Mm LINE L1 4652 5691 -192 8 1843 1808 121 158 6 chrX 164953827 164954176 -1696120 - L1_Mm LINE L1 -1268 4615 4214 8 1843 6799 73 8 0 chrX 164954172 164955102 -1695194 - L1_Mus1 LINE L1 0 6567 5631 8 1843 1044 133 6 0 chrX 164955090 164955271 -1695025 - Lx LINE L1 -1653 4224 4043 8 1843 2170 262 125 78 chrX 164955292 164956175 -1694121 - RMER17B LTR ERVK -91 867 1 8 1843 1436 132 62 0 chrX 164956176 164956433 -1693863 - L1_Mm LINE L1 -1827 4056 3784 8 1843 1325 130 0 5 chrX 164956435 164956643 -1693653 + Lx LINE L1 5948 6154 -500 8 1843 318 136 0 0 chrX 164956637 164956696 -1693600 - L1_Mm LINE L1 -862 5021 4963 8 1843 2320 68 15 9 chrX 164956696 164957023 -1693273 + RMER17A LTR ERVK 1 329 -422 8 1843 68 0 0 0 chrX 164957023 164957091 -1693205 + AT_rich Low_complexity Low_complexity 1 68 0 8 1843 3196 135 8 6 chrX 164957091 164957598 -1692698 + Lx LINE L1 6141 6648 -6 8 1843 2151 209 37 92 chrX 164957619 164958377 -1691919 + RLTR42-int LTR ERVK 1167 1882 -3640 8 1843 1502 154 0 19 chrX 164958377 164958642 -1691654 + L1_Mur2 LINE L1 5314 5573 -304 8 1843 2098 230 25 0 chrX 164958644 164959114 -1691182 + Lx5 LINE L1 6569 7050 0 8 1843 855 136 93 46 chrX 164959187 164959403 -1690893 + RLTR42-int LTR ERVK 1870 2095 -3427 8 1843 9678 159 66 91 chrX 164959401 164959556 -1690740 + RLTR42-int LTR ERVK 3150 3294 -2228 8 1843 2017 182 71 5 chrX 164959556 164959949 -1690347 + MTC LTR MaLR 1 419 -2 8 1843 9678 159 66 91 chrX 164959949 164960402 -1689894 + RLTR42-int LTR ERVK 3295 3757 -1765 8 1843 908 168 21 0 chrX 164960402 164960545 -1689751 + B1_Mur3 SINE Alu 1 146 -3 8 1843 9678 159 66 91 chrX 164960545 164961213 -1689083 + RLTR42-int LTR ERVK 3758 4304 -1218 8 1843 643 153 0 28 chrX 164961213 164961354 -1688942 - Lx LINE L1 0 6654 6518 8 1843 9678 159 66 91 chrX 164961354 164962509 -1687787 + RLTR42-int LTR ERVK 4305 5522 0 8 1843 1135 167 5 38 chrX 164962511 164962722 -1687574 + RLTR42 LTR ERVK 5 208 -31 8 1843 232 316 116 0 chrX 164962714 164962809 -1687487 - B3A SINE B2 -9 189 84 8 1843 660 246 116 6 chrX 164963041 164963213 -1687083 + B3A SINE B2 2 192 -6 8 1843 341 330 43 11 chrX 164963234 164963421 -1686875 - B3A SINE B2 -4 194 2 9 1843 715 325 67 0 chrX 164963425 164963634 -1686662 - ID_B1 SINE B4 -1 223 1 9 1843 657 100 36 0 chrX 164965188 164965298 -1684998 - URR1B DNA MER1_type 0 225 112 9 1843 10729 90 6 2 chrX 164965369 164967717 -1682579 + L1_Mus1 LINE L1 4208 6567 0 9 1843 408 107 0 0 chrX 164967735 164967791 -1682505 + ORR1B2 LTR MaLR 312 367 0 9 1843 1428 44 0 0 chrX 164968071 164968253 -1682043 - Lx LINE L1 -728 5926 5745 9 1843 4598 108 31 8 chrX 164968255 164968879 -1681417 + Lx LINE L1 5935 6574 -80 9 1843 2854 73 44 3 chrX 164968879 164969263 -1681033 - MTB LTR MaLR 0 400 1 9 1843 4598 108 31 8 chrX 164969263 164969341 -1680955 + Lx LINE L1 6575 6653 -1 9 1843 1581 264 8 29 chrX 164969755 164970138 -1680158 + MTEa LTR MaLR 1 375 -4 9 1843 239 378 60 20 chrX 164970287 164970438 -1679858 - LTR16B2 LTR ERVL -176 286 130 9 1843 613 281 66 5 chrX 164970652 164970849 -1679447 - B3 SINE B2 -6 210 2 9 1843 1041 116 0 0 chrX 164970940 164971078 -1679218 + B1_Mus1 SINE Alu 2 139 -9 9 1843 274 23 23 23 chrX 164971078 164971122 -1679174 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 9 1843 561 239 18 0 chrX 164971683 164971792 -1678504 - B3A SINE B2 -85 113 3 9 1843 213 213 0 0 chrX 164971793 164971840 -1678456 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 9 1843 425 193 56 22 chrX 164971840 164971930 -1678366 - PB1D9 SINE Alu -27 93 1 9 1843 1980 194 8 21 chrX 164972940 164973325 -1676971 - MTC LTR MaLR -24 397 18 9 1843 387 60 0 0 chrX 164973325 164973375 -1676921 + (GA)n Simple_repeat Simple_repeat 1 50 0 9 1843 365 271 60 78 chrX 164973619 164973735 -1676561 + MT2B LTR ERVL 144 257 -344 9 1843 681 144 54 0 chrX 164973656 164973767 -1676529 + B1_Mus1 SINE Alu 19 135 -13 9 1843 195 42 0 0 chrX 164973767 164973791 -1676505 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 9 1843 437 256 76 53 chrX 164974572 164974586 -1675710 - B1_Mur4 SINE Alu -5 145 133 9 1843 1862 104 172 0 chrX 164974586 164974865 -1675431 + ORR1A2 LTR MaLR 1 327 0 9 1843 442 226 97 19 chrX 164974865 164974982 -1675314 - B1_Mur2 SINE Alu -18 132 10 9 1843 239 291 83 83 chrX 164974877 164974997 -1675299 - ID_B1 SINE B4 -24 200 81 9 1843 566 310 75 17 chrX 164975423 164975597 -1674699 + ID_B1 SINE B4 5 188 -36 9 1843 562 145 9 9 chrX 164975603 164975714 -1674582 + CT-rich Low_complexity Low_complexity 2 112 0 9 1843 261 83 0 0 chrX 164975714 164975750 -1674546 + (CA)n Simple_repeat Simple_repeat 1 36 0 9 1843 593 312 117 27 chrX 164975787 164976044 -1674252 + B4A SINE B4 1 280 -12 9 1843 402 74 0 0 chrX 164976065 164976119 -1674177 + (CA)n Simple_repeat Simple_repeat 2 55 0 9 1843 242 229 0 0 chrX 164976120 164976181 -1674115 + L1ME1 LINE L1 4260 4320 -1826 9 1843 219 69 0 0 chrX 164976301 164976330 -1673966 + (TAA)n Simple_repeat Simple_repeat 2 30 0 9 1843 1172 106 50 0 chrX 164976556 164976736 -1673560 - B2_Mm1t SINE B2 -3 190 2 9 1843 1544 239 16 13 chrX 164976998 164977376 -1672920 + MTEa LTR MaLR 1 379 0 9 1843 14557 149 21 34 chrX 164977883 164980364 -1669932 + L1VL4 LINE L1 375 2870 -3016 9 1843 180 0 0 0 chrX 164980364 164980384 -1669912 + (GGAA)n Simple_repeat Simple_repeat 1 20 0 9 1843 14557 169 31 38 chrX 164980384 164980754 -1669542 + L1VL4 LINE L1 2871 3134 -2752 9 1843 222 37 0 0 chrX 164980754 164980781 -1669515 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1843 14557 169 31 38 chrX 164980781 164982014 -1668282 + L1VL4 LINE L1 3135 4412 -1474 9 1843 3907 156 6 3 chrX 164982014 164982665 -1667631 + Lx LINE L1 5998 6650 -4 9 1843 3719 306 48 75 chrX 164982665 164983319 -1666977 + L1VL4 LINE L1 4412 5065 -1078 9 1843 309 242 70 10 chrX 164983331 164983431 -1666865 + L1ME1 LINE L1 5137 5242 -904 9 1843 504 156 0 18 chrX 164983490 164983591 -1666705 + MT2B LTR ERVL 3 96 -437 9 1843 1364 114 101 79 chrX 164983621 164983898 -1666398 + ORR1A3 LTR MaLR 1 283 -43 9 1843 327 106 0 0 chrX 164984394 164984441 -1665855 + ORR1A3 LTR MaLR 272 318 -8 9 1843 478 331 75 30 chrX 164984445 164984713 -1665583 + MTE2a LTR MaLR 100 379 0 9 1843 253 268 41 0 chrX 164984713 164984810 -1665486 + L1ME1 LINE L1 5834 5934 -245 9 1843 699 248 20 0 chrX 164984830 164984979 -1665317 - B3 SINE B2 -6 210 59 9 1843 774 162 27 53 chrX 164985133 164985283 -1665013 + B1_Mus1 SINE Alu 5 150 0 9 1843 324 120 0 0 chrX 164985509 164985559 -1664737 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 9 1843 475 29 44 0 chrX 164985559 164985626 -1664670 + (CATA)n Simple_repeat Simple_repeat 2 72 0 9 1843 192 152 0 0 chrX 164985626 164985659 -1664637 + (TG)n Simple_repeat Simple_repeat 1 33 0 9 1843 598 289 13 0 chrX 164985659 164985818 -1664478 - RSINE1 SINE B4 0 165 5 9 1843 183 80 0 0 chrX 164986160 164986185 -1664111 + (GA)n Simple_repeat Simple_repeat 2 26 0 9 1843 392 288 46 103 chrX 164986185 164986359 -1663937 + RSINE1 SINE B4 2 165 0 9 1843 406 272 11 155 chrX 164986956 164987143 -1663153 + MTEa LTR MaLR 24 183 -196 9 1843 255 146 0 0 chrX 164987181 164987236 -1663060 + (TC)n Simple_repeat Simple_repeat 2 56 0 9 1843 294 308 16 41 chrX 164988440 164988562 -1661734 - RMER15 LTR ERVL -21 554 436 9 1843 2284 72 76 0 chrX 164988562 164988866 -1661430 + ORR1A2 LTR MaLR 1 327 0 9 1843 8163 87 31 15 chrX 164988924 164989811 -1660485 - MusHAL1 LINE L1 -148 2564 1668 9 1843 198 0 0 0 chrX 164989811 164989833 -1660463 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 9 1843 8163 87 31 15 chrX 164989833 164990213 -1660083 - MusHAL1 LINE L1 -1045 1667 1278 9 1843 799 159 50 7 chrX 164990213 164990352 -1659944 - B1_Mur3 SINE Alu -4 145 1 9 1843 216 0 0 0 chrX 164990695 164990719 -1659577 + (TA)n Simple_repeat Simple_repeat 1 24 0 9 1843 778 125 11 0 chrX 164990912 164991088 -1659208 + (TTTTTG)n Simple_repeat Simple_repeat 1 178 0 9 1843 789 158 0 0 chrX 164991058 164991235 -1659061 + (TATATG)n Simple_repeat Simple_repeat 4 180 0 9 1843 2997 23 0 0 chrX 164991457 164991799 -1658497 + L1Md_F2 LINE L1 6227 6568 -14 9 1843 956 218 11 0 chrX 164991813 164991992 -1658304 + B3 SINE B2 27 207 -9 9 1843 788 279 9 14 chrX 164992108 164992319 -1657977 - B3 SINE B2 -5 211 2 9 1843 1232 229 69 78 chrX 164992363 164992780 -1657516 + MT2A LTR ERVL 3 553 -48 9 1843 422 207 0 26 chrX 164992830 164992944 -1657352 + (TA)n Simple_repeat Simple_repeat 2 112 0 9 1843 335 60 0 20 chrX 164993036 164993087 -1657209 + (TA)n Simple_repeat Simple_repeat 1 50 0 9 1843 243 0 0 0 chrX 164993087 164993113 -1657183 + (GA)n Simple_repeat Simple_repeat 2 28 0 9 1843 535 238 176 50 chrX 164993147 164993346 -1656950 - URR1B DNA MER1_type 0 225 2 9 1843 1223 216 27 33 chrX 164993462 164993793 -1656503 + L1MC1 LINE L1 6003 6331 -2 9 1843 928 202 104 0 chrX 164994742 164994935 -1655361 + B3 SINE B2 2 214 -2 9 1843 653 309 56 24 chrX 164995157 164995495 -1654801 - Lx6 LINE L1 -27 7433 7085 9 1843 7264 182 42 83 chrX 164995528 164995701 -1654595 - L1_Mur3 LINE L1 -2657 3220 3057 9 1843 354 45 0 0 chrX 164995701 164995745 -1654551 + (TG)n Simple_repeat Simple_repeat 1 44 0 9 1843 7264 182 42 83 chrX 164995745 164996718 -1653578 - L1_Mur3 LINE L1 -2821 3056 2050 9 1843 387 0 0 0 chrX 164996718 164996761 -1653535 + (TG)n Simple_repeat Simple_repeat 1 43 0 9 1843 7264 182 42 83 chrX 164996761 164997172 -1653124 - L1_Mur3 LINE L1 -3828 2049 1766 9 1843 195 42 0 0 chrX 164997172 164997196 -1653100 + (GAA)n Simple_repeat Simple_repeat 2 25 0 9 1843 7264 186 40 83 chrX 164997196 164997779 -1652517 - L1_Mur3 LINE L1 -4112 1765 1192 9 1843 335 60 0 20 chrX 164997779 164997830 -1652466 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 9 1843 1183 227 15 81 chrX 164997830 164998131 -1652165 - L1_Mur3 LINE L1 -6537 1191 892 9 1843 1663 150 23 74 chrX 164998170 164998602 -1651694 - RMER17C LTR ERVK 0 410 1 9 1843 490 40 26 13 chrX 164998990 164999067 -1651229 + (TTTTG)n Simple_repeat Simple_repeat 3 80 0 9 1843 369 43 0 0 chrX 164999155 164999202 -1651094 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 1843 484 243 181 14 chrX 164999335 164999473 -1650823 + B3A SINE B2 4 164 -34 9 1843 375 78 0 0 chrX 164999474 164999525 -1650771 + (TC)n Simple_repeat Simple_repeat 2 52 0 9 1843 327 25 0 0 chrX 164999525 164999565 -1650731 + (CA)n Simple_repeat Simple_repeat 1 40 0 9 1843 23 0 0 0 chrX 164999565 164999588 -1650708 + AT_rich Low_complexity Low_complexity 1 23 0 9 1843 277 217 0 0 chrX 165000017 165000077 -1650219 - ID_B1 SINE B4 -1 223 164 1 1843 246 95 0 0 chrX 165000193 165000235 -1650061 + (TTAG)n Simple_repeat Simple_repeat 3 44 0 2 1843 680 160 104 0 chrX 165000238 165000363 -1649933 - B1_Mur4 SINE Alu -7 143 6 3 1843 263 289 34 88 chrX 165000266 165000414 -1649882 - MT2B LTR ERVL -337 264 125 4 1843 916 259 96 13 chrX 165000411 165000724 -1649572 + Kanga2_a DNA Tc2 6 344 -544 5 1843 396 316 158 0 chrX 165000749 165000888 -1649408 + RSINE1 SINE B4 3 163 -2 6 1843 422 298 89 33 chrX 165001033 165001335 -1648961 + Kanga2_a DNA Tc2 567 885 -3 5 1843 345 335 70 100 chrX 165001550 165001849 -1648447 + ORR1E LTR MaLR 13 302 -57 7 1843 375 83 0 0 chrX 165001919 165001979 -1648317 + (GA)n Simple_repeat Simple_repeat 1 60 0 8 1843 587 340 0 13 chrX 165001979 165002137 -1648159 - B3A SINE B2 -42 156 1 9 1843 545 269 25 0 chrX 165002168 165002287 -1648009 - B1_Mur2 SINE Alu -27 122 1 1 1843 909 207 25 49 chrX 165002510 165002713 -1647583 - B3A SINE B2 0 198 1 1 1843 371 234 0 0 chrX 165002850 165002914 -1647382 + PB1D9 SINE Alu 5 68 -52 1 1843 657 296 50 36 chrX 165003008 165003372 -1646924 + L1MB7 LINE L1 5476 5844 -340 1 1843 510 317 44 4 chrX 165003376 165003527 -1646769 - ID_B1 SINE B4 -46 246 88 1 1843 754 173 53 0 chrX 165003586 165003719 -1646577 - B1_Mur2 SINE Alu -1 148 9 1 1843 360 0 0 0 chrX 165004018 165004058 -1646238 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1843 332 345 43 8 chrX 165004094 165004211 -1646085 - B3A SINE B2 -77 121 1 1 1843 297 290 68 68 chrX 165004655 165004681 -1645615 + ID_B1 SINE B4 83 215 -9 1 1843 473 252 0 37 chrX 165004681 165004788 -1645508 + B1F2 SINE Alu 38 140 -9 1 1843 531 43 0 0 chrX 165004792 165004862 -1645434 + (CA)n Simple_repeat Simple_repeat 1 70 0 2 1843 694 270 47 68 chrX 165004987 165005076 -1645220 + ID SINE ID 2 87 -137 2 1843 1417 245 45 48 chrX 165005076 165005278 -1645018 - MTEa LTR MaLR -3 376 171 2 1843 246 62 0 0 chrX 165005278 165005310 -1644986 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2 1843 1417 245 45 48 chrX 165005310 165005484 -1644812 - MTEa LTR MaLR -209 170 1 2 1843 694 270 47 68 chrX 165005484 165005585 -1644711 + ID_B1 SINE B4 88 188 -36 2 1843 316 271 10 10 chrX 165005601 165005698 -1644598 + GA-rich Low_complexity Low_complexity 1 97 0 2 1843 744 264 66 0 chrX 165006119 165006286 -1644010 + ID_B1 SINE B4 30 207 -17 2 1843 473 115 11 0 chrX 165006435 165006522 -1643774 + (CA)n Simple_repeat Simple_repeat 1 88 0 2 1843 438 355 14 0 chrX 165006539 165006677 -1643619 - B1F SINE Alu -7 142 3 2 1843 992 246 0 0 chrX 165007678 165007865 -1642431 - B3 SINE B2 -28 188 2 2 1843 637 217 110 53 chrX 165008108 165008317 -1641979 + ID_B1 SINE B4 4 224 0 2 1843 856 279 72 54 chrX 165008664 165008941 -1641355 + B4A SINE B4 6 287 -5 3 1843 761 261 108 44 chrX 165008987 165009236 -1641060 + MTEa LTR MaLR 44 308 -71 3 1843 446 238 132 78 chrX 165009376 165009581 -1640715 - B3 SINE B2 0 216 1 3 1843 570 305 78 5 chrX 165010316 165010507 -1639789 + MER20 DNA MER1_type 7 211 -8 3 1843 220 316 114 11 chrX 165010551 165010727 -1639569 + L2 LINE L2 2324 2517 -902 3 1843 410 259 0 0 chrX 165010841 165010922 -1639374 - B4A SINE B4 -69 223 143 3 1843 689 151 8 32 chrX 165010928 165011051 -1639245 + MTC LTR MaLR 1 120 -301 3 1843 207 100 0 0 chrX 165011051 165011081 -1639215 + (TTTTC)n Simple_repeat Simple_repeat 4 33 0 3 1843 6568 74 42 1 chrX 165011084 165012216 -1638080 - L1_Mus1 LINE L1 0 6567 5394 3 1843 1689 189 9 19 chrX 165012216 165012539 -1637757 + MTC LTR MaLR 102 421 0 3 1843 424 187 0 0 chrX 165012574 165012649 -1637647 - B4A SINE B4 -217 75 1 3 1843 443 318 82 5 chrX 165013034 165013230 -1637066 + MER58B DNA MER1_type 80 290 -51 3 1843 267 133 0 0 chrX 165013230 165013275 -1637021 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1843 1019 251 5 0 chrX 165013311 165013526 -1636770 + B3 SINE B2 1 216 0 4 1843 390 219 10 50 chrX 165013564 165013665 -1636631 + PB1D10 SINE Alu 21 117 0 4 1843 538 339 82 5 chrX 165013668 165013852 -1636444 + ID_B1 SINE B4 2 199 -25 4 1843 1290 173 4 4 chrX 165014545 165014771 -1635525 - URR1A DNA MER1_type 0 226 1 4 1843 186 43 0 0 chrX 165015348 165015371 -1634925 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1843 2738 50 9 3 chrX 165015652 165015996 -1634300 - ORR1A1 LTR MaLR 0 346 1 4 1843 1846 66 10 12 chrX 165015996 165016259 -1634037 - ORR1A1-int LTR MaLR 0 1792 1540 4 1843 247 128 26 0 chrX 165016246 165016285 -1634011 - ORR1A1 LTR MaLR -327 40 1 4 1843 693 235 0 64 chrX 165016285 165016426 -1633870 - ID_B1 SINE B4 -89 135 4 4 1843 677 199 13 20 chrX 165016456 165016605 -1633691 + B1_Mur4 SINE Alu 1 148 -2 4 1843 335 221 181 104 chrX 165017296 165017478 -1632818 + B3A SINE B2 2 197 -1 4 1843 1193 53 0 0 chrX 165017572 165017722 -1632574 + L1Md_F2 LINE L1 6418 6567 -15 5 1843 808 261 5 25 chrX 165017734 165017934 -1632362 + B3 SINE B2 4 199 -17 5 1843 447 19 0 0 chrX 165017935 165017987 -1632309 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 5 1843 294 213 65 21 chrX 165017997 165018097 -1632199 + L1MA6 LINE L1 5510 5611 -692 5 1843 278 26 26 0 chrX 165018097 165018136 -1632160 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 5 1843 555 296 7 27 chrX 165018157 165018303 -1631993 + B1F SINE Alu 1 143 -6 5 1843 1176 276 62 5 chrX 165018342 165018760 -1631536 + L1MA6 LINE L1 5633 6074 -226 5 1843 293 280 69 14 chrX 165018941 165019120 -1631176 + L1MA6 LINE L1 6111 6300 0 5 1843 189 26 79 0 chrX 165019137 165019175 -1631121 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 1843 239 343 30 0 chrX 165019362 165019429 -1630867 - LTR16E1 LTR ERVL -244 294 226 5 1844 249 221 72 14 chrX 165019735 165019804 -1630492 + Lx8 LINE L1 7166 7238 -235 5 1844 456 218 0 47 chrX 165019826 165019932 -1630364 - U6 snRNA snRNA -4 103 3 5 1844 847 229 12 51 chrX 165019935 165020192 -1630104 + Lx8 LINE L1 7225 7471 -2 5 1844 196 281 0 17 chrX 165020888 165020946 -1629350 - L2 LINE L2 -480 2939 2883 6 1844 429 255 136 73 chrX 165021618 165021837 -1628459 - MLT1D LTR MaLR 0 627 315 6 1844 3820 95 32 7 chrX 165021837 165022399 -1627897 + Lx LINE L1 6073 6648 -6 6 1844 332 277 70 119 chrX 165022399 165022616 -1627680 - MLT1D LTR MaLR -262 365 145 6 1844 874 289 43 63 chrX 165022620 165022967 -1627329 + MTEa LTR MaLR 18 357 -22 6 1844 226 283 101 70 chrX 165022973 165023102 -1627194 - MLT1D LTR MaLR -478 149 17 6 1844 513 0 0 0 chrX 165023115 165023172 -1627124 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 6 1844 650 295 98 4 chrX 165023917 165024182 -1626114 + B4A SINE B4 3 292 0 6 1844 192 125 0 0 chrX 165024185 165024217 -1626079 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1844 712 281 7 0 chrX 165024271 165024416 -1625880 + ID_B1 SINE B4 4 149 -75 6 1844 529 297 12 49 chrX 165024416 165024579 -1625717 + RSINE1 SINE B4 1 157 -8 6 1844 383 0 21 0 chrX 165024580 165024627 -1625669 + (TC)n Simple_repeat Simple_repeat 1 48 0 6 1844 465 19 0 0 chrX 165024627 165024680 -1625616 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 1844 357 266 36 108 chrX 165024701 165024717 -1625579 + MT2B LTR ERVL 151 278 -322 7 1844 673 240 0 8 chrX 165024717 165024839 -1625457 + B1_Mur1 SINE Alu 2 122 -27 7 1844 903 257 10 10 chrX 165025055 165025263 -1625033 + ID_B1 SINE B4 2 209 -15 7 1844 269 273 203 0 chrX 165025453 165025581 -1624715 + MER5A DNA MER1_type 30 183 -6 7 1844 1038 311 21 0 chrX 165025953 165026233 -1624063 - B4 SINE B4 0 292 7 7 1844 415 279 48 72 chrX 165026409 165026575 -1623721 - MER5A1 DNA MER1_type -4 162 1 7 1844 512 211 40 16 chrX 165026813 165026938 -1623358 - MER117 DNA MER1_type -69 128 1 7 1844 235 273 81 12 chrX 165027166 165027295 -1623001 + MIRc SINE MIR 96 228 -40 7 1844 3323 102 13 0 chrX 165027481 165028082 -1622214 - Lx LINE L1 -576 6078 5468 7 1844 1790 165 11 11 chrX 165028079 165028408 -1621888 + Lx LINE L1 5144 5471 -412 7 1844 3186 120 84 19 chrX 165028408 165028933 -1621363 + Lx LINE L1 6092 6650 -4 8 1844 1790 165 11 11 chrX 165028933 165028952 -1621344 + L1_Mm LINE L1 5472 5492 -391 7 1844 315 316 138 47 chrX 165029128 165029299 -1620997 - MLT1E2 LTR MaLR -138 516 323 8 1844 180 0 0 0 chrX 165029321 165029341 -1620955 + (ATAAG)n Simple_repeat Simple_repeat 5 24 0 8 1844 672 261 172 0 chrX 165029381 165029561 -1620735 - B3 SINE B2 0 216 6 8 1844 24 0 0 0 chrX 165029561 165029585 -1620711 + AT_rich Low_complexity Low_complexity 1 24 0 8 1844 4321 186 87 15 chrX 165029684 165030526 -1619770 + RMER19B LTR ERVK 1 902 0 8 1844 24 0 0 0 chrX 165030622 165030646 -1619650 + AT_rich Low_complexity Low_complexity 1 24 0 8 1844 332 296 77 47 chrX 165031054 165031224 -1619072 + MER5B DNA MER1_type 4 178 0 8 1844 582 209 262 6 chrX 165031519 165031683 -1618613 + B3 SINE B2 1 206 -10 8 1844 26 50 0 0 chrX 165031688 165031728 -1618568 + AT_rich Low_complexity Low_complexity 1 40 0 8 1844 207 0 0 0 chrX 165031818 165031841 -1618455 + (TGGG)n Simple_repeat Simple_repeat 3 25 0 9 1844 391 340 24 35 chrX 165031847 165032136 -1618160 - B4A SINE B4 -6 286 1 9 1844 888 158 0 14 chrX 165032905 165033046 -1617250 + B1_Mus1 SINE Alu 9 147 -1 9 1844 874 321 142 11 chrX 165033078 165033450 -1616846 - MLT1F LTR MaLR -53 495 75 9 1844 342 252 0 147 chrX 165033792 165033908 -1616388 + RSINE1 SINE B4 43 141 -24 9 1844 252 0 0 0 chrX 165033924 165033952 -1616344 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 1844 2923 193 85 49 chrX 165034033 165034803 -1615493 - Lx7 LINE L1 -4 7692 6908 9 1844 671 82 40 16 chrX 165034857 165034981 -1615315 + (TTTCC)n Simple_repeat Simple_repeat 4 130 0 9 1844 2811 152 33 27 chrX 165035006 165035519 -1614777 + RLTR28 LTR ERVL 9 524 0 9 1844 183 42 0 0 chrX 165035594 165035618 -1614678 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 1844 786 188 0 0 chrX 165036521 165036654 -1613642 - B1_Mur3 SINE Alu 0 149 17 1 1844 704 307 44 6 chrX 165036753 165036933 -1613363 + ID_B1 SINE B4 29 215 -9 1 1844 205 152 0 0 chrX 165036933 165036966 -1613330 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1844 211 114 0 28 chrX 165037014 165037050 -1613246 + (TTGG)n Simple_repeat Simple_repeat 1 35 0 1 1844 855 177 0 33 chrX 165037082 165037234 -1613062 - B1_Mur4 SINE Alu -3 147 1 1 1844 363 302 53 13 chrX 165037579 165037730 -1612566 + MLT1A1 LTR MaLR 1 157 -251 1 1844 298 307 93 14 chrX 165037760 165037882 -1612414 + MLT1A1 LTR MaLR 207 381 -27 1 1844 1839 181 5 45 chrX 165037882 165038264 -1612032 - ORR1B2 LTR MaLR 0 367 1 1 1844 261 340 19 37 chrX 165038264 165038278 -1612018 + MLT1A1 LTR MaLR 382 395 -13 1 1844 194 394 43 6 chrX 165038289 165038450 -1611846 - L2 LINE L2 -652 2767 2601 1 1844 1565 234 61 6 chrX 165038464 165038808 -1611488 + ORR1D2 LTR MaLR 1 363 -7 1 1844 1088 280 28 0 chrX 165038821 165039103 -1611193 - MTEa LTR MaLR -5 374 85 1 1844 932 243 97 97 chrX 165039120 165039493 -1610803 - MTE2a LTR MaLR -6 373 1 1 1844 312 221 14 42 chrX 165039493 165039564 -1610732 - MTEa LTR MaLR -301 78 10 1 1844 395 382 38 19 chrX 165039569 165039833 -1610463 - L2 LINE L2 -830 2589 2321 1 1844 683 142 0 8 chrX 165039995 165040116 -1610180 + (GGAA)n Simple_repeat Simple_repeat 4 123 0 1 1844 231 36 0 0 chrX 165040266 165040294 -1610002 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1844 1601 187 256 12 chrX 165040829 165041333 -1608963 + Lx9 LINE L1 7012 7638 -6 1 1844 359 312 125 0 chrX 165041543 165041687 -1608609 + RSINE1 SINE B4 2 163 -2 1 1844 363 44 0 0 chrX 165041916 165041961 -1608335 + (GGA)n Simple_repeat Simple_repeat 3 47 0 1 1844 1210 177 22 31 chrX 165042368 165042414 -1607882 + URR1B DNA MER1_type 1 46 -179 1 1844 7059 86 35 7 chrX 165042414 165043409 -1606887 + RLTR13D5 LTR ERVK 1 1023 0 1 1844 1210 177 22 31 chrX 165043409 165043589 -1606707 + URR1B DNA MER1_type 47 225 0 1 1844 249 33 0 0 chrX 165044123 165044153 -1606143 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 1 1844 696 309 29 24 chrX 165044314 165044584 -1605712 + B4A SINE B4 12 292 0 1 1844 855 254 16 0 chrX 165044881 165045066 -1605230 + ID_B1 SINE B4 35 222 -2 1 1844 308 270 116 9 chrX 165045738 165045850 -1604446 + L1M5 LINE L1 5000 5123 -1023 1 1844 735 307 25 87 chrX 165045853 165046128 -1604168 - B4 SINE B4 -32 260 3 1 1844 810 208 0 13 chrX 165046590 165046741 -1603555 - B1F2 SINE Alu 0 149 1 1 1844 1085 78 126 0 chrX 165046830 165046997 -1603299 - B2_Mm2 SINE B2 -6 189 2 1 1844 311 297 14 0 chrX 165047178 165047252 -1603044 - ID4_ SINE ID -5 78 4 1 1844 423 83 0 0 chrX 165047666 165047726 -1602570 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 1844 558 247 87 8 chrX 165047765 165047897 -1602399 + ID_B1 SINE B4 2 145 -147 1 1844 325 52 69 0 chrX 165048036 165048094 -1602202 + (TCTCTG)n Simple_repeat Simple_repeat 2 63 0 1 1844 350 342 71 79 chrX 165049033 165049343 -1600953 - B4A SINE B4 -21 271 1 1 1844 11436 228 119 16 chrX 165049533 165051201 -1599095 - Lx6 LINE L1 -26 7434 5574 1 1844 1323 113 0 23 chrX 165051201 165051418 -1598878 + L1Md_F2 LINE L1 6370 6581 -1 1 1844 11436 156 44 20 chrX 165051418 165053572 -1596724 - Lx6 LINE L1 -307 5573 3391 1 1844 2086 103 25 13 chrX 165053576 165053891 -1596405 - ORR1A2 LTR MaLR -8 319 1 1 1844 2383 93 6 28 chrX 165053891 165054254 -1596042 - ORR1A2-int LTR MaLR 0 1963 1609 1 1844 306 0 0 0 chrX 165054261 165054295 -1596001 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1 1844 4640 172 25 32 chrX 165054323 165055475 -1594821 - Lx6 LINE L1 -4460 1420 277 1 1844 419 324 0 29 chrX 165055505 165055610 -1594686 + RSINE1 SINE B4 3 104 -61 1 1844 417 66 0 0 chrX 165055741 165055802 -1594494 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 1844 319 273 67 11 chrX 165055803 165055892 -1594404 - RSINE1 SINE B4 -22 143 50 1 1844 1763 165 59 57 chrX 165056014 165056431 -1593865 + ORR1B2 LTR MaLR 1 378 0 1 1844 1211 251 102 31 chrX 165056881 165056983 -1593313 - MTE2b LTR MaLR 0 379 281 1 1844 1621 211 50 56 chrX 165056983 165057181 -1593115 - ORR1D1 LTR MaLR 0 374 177 1 1844 977 123 0 6 chrX 165057181 165057352 -1592944 + (GGA)n Simple_repeat Simple_repeat 2 171 0 1 1844 1621 211 50 56 chrX 165057352 165057529 -1592767 - ORR1D1 LTR MaLR -198 176 1 1 1844 1211 251 102 31 chrX 165057529 165057780 -1592516 - MTE2b LTR MaLR -99 280 1 1 1844 246 360 0 0 chrX 165058172 165058261 -1592035 + Tigger15a DNA TcMar 193 281 -434 1 1844 538 275 22 0 chrX 165058636 165058774 -1591522 + RSINE1 SINE B4 3 143 -22 1 1844 342 98 0 0 chrX 165058782 165058833 -1591463 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1844 369 319 0 0 chrX 165058875 165058966 -1591330 + B1F SINE Alu 1 91 -58 1 1844 180 289 0 0 chrX 165059218 165059308 -1590988 + (TA)n Simple_repeat Simple_repeat 1 90 0 1 1844 4628 126 23 44 chrX 165059422 165060175 -1590121 - RMER19A LTR ERVK 0 737 1 1 1844 353 303 74 22 chrX 165060175 165060310 -1589986 + ID_B1 SINE B4 4 145 -79 1 1844 239 285 86 0 chrX 165060583 165060699 -1589597 - MLT1F1 LTR MaLR -329 240 99 1 1844 973 120 7 14 chrX 165060730 165060874 -1589422 - B1_Mus2 SINE Alu -2 145 3 1 1844 316 306 49 120 chrX 165060998 165061407 -1588889 + L1MC5 LINE L1 7163 7542 -419 1 1844 513 248 29 7 chrX 165061478 165061638 -1588658 - L1M4 LINE L1 -396 5766 5603 1 1844 1014 192 41 97 chrX 165061762 165062102 -1588194 - RLTRETN_Mm LTR ERVK 0 322 2 1 1844 732 104 0 0 chrX 165062496 165062602 -1587694 + B2_Mm2 SINE B2 1 106 -89 1 1844 189 0 0 0 chrX 165062606 165062627 -1587669 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1844 35295 89 6 10 chrX 165062642 165067688 -1582608 + L1Md_F2 LINE L1 214 5234 -649 1 1844 279 0 0 0 chrX 165067688 165067719 -1582577 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 1844 35295 65 2 2 chrX 165067719 165068751 -1581545 + L1Md_F2 LINE L1 5235 6275 -307 1 1844 1724 40 4 73 chrX 165068778 165069023 -1581273 - L1_Mus2 LINE L1 0 6566 6339 1 1844 890 48 0 0 chrX 165069023 165069128 -1581168 + L1_Mus2 LINE L1 6214 6318 -248 1 1844 794 201 0 27 chrX 165069313 165069461 -1580835 - B1_Mur2 SINE Alu -1 148 5 1 1844 631 303 17 6 chrX 165071046 165071225 -1579071 + ID_B1 SINE B4 1 181 -43 1 1844 285 98 0 0 chrX 165071293 165071334 -1578962 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 1 1844 573 279 7 35 chrX 165071345 165071490 -1578806 + ID_B1 SINE B4 81 221 -3 1 1844 1049 220 52 176 chrX 165071751 165072176 -1578120 - ORR1D1 LTR MaLR 0 374 3 1 1844 326 32 46 46 chrX 165072202 165072267 -1578029 + B2_Mm2 SINE B2 131 195 0 1 1844 257 324 0 0 chrX 165073685 165073756 -1576540 + MER58A DNA MER1_type 1 71 -153 1 1844 245 235 43 14 chrX 165074232 165074301 -1575995 + MLT1H2 LTR MaLR 100 170 -379 1 1844 1223 111 135 5 chrX 165074330 165074530 -1575766 - URR1A DNA MER1_type 0 226 1 1 1844 270 320 105 39 chrX 165074626 165074779 -1575517 + MLT1H2 LTR MaLR 287 449 -40 1 1844 464 311 129 25 chrX 165075225 165075362 -1574934 + L1MB2 LINE L1 5667 5818 -494 1 1844 4512 71 8 13 chrX 165075362 165075960 -1574336 - L1_Mus1 LINE L1 0 6567 5973 1 1844 606 273 106 4 chrX 165075960 165076214 -1574082 + L1MB2 LINE L1 5839 6118 -53 1 1844 402 305 0 94 chrX 165076225 165076406 -1573890 + RSINE1 SINE B4 2 165 0 1 1844 446 321 29 0 chrX 165076452 165076592 -1573704 + ID_B1 SINE B4 81 224 0 1 1844 240 206 175 0 chrX 165076600 165076663 -1573633 + B3 SINE B2 47 120 -96 1 1844 237 329 0 35 chrX 165078107 165078192 -1572104 + RSINE1 SINE B4 84 165 0 1 1844 531 269 15 15 chrX 165078413 165078549 -1571747 - B1_Mur1 SINE Alu -9 140 5 1 1844 333 0 0 0 chrX 165079096 165079133 -1571163 + (T)n Simple_repeat Simple_repeat 1 37 0 1 1844 741 254 127 0 chrX 165079217 165079406 -1570890 - B3 SINE B2 -3 213 1 1 1844 1460 33 54 32 chrX 165079855 165080041 -1570255 + B2_Mm2 SINE B2 2 191 -4 1 1844 323 308 18 36 chrX 165080936 165081047 -1569249 + MTEa LTR MaLR 258 366 -13 1 1844 261 98 0 0 chrX 165081077 165081118 -1569178 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1 1844 273 239 0 6 chrX 165081348 165081428 -1568868 - MLT1H LTR MaLR -6 554 416 1 1844 315 247 113 0 chrX 165081634 165081731 -1568565 - MLT1H LTR MaLR -375 174 67 1 1844 3410 25 8 0 chrX 165081933 165082326 -1567970 - MTA_Mm LTR MaLR 0 396 1 1 1844 360 243 119 87 chrX 165082334 165082374 -1567922 - B2_Mm2 SINE B2 -4 191 158 1 1844 2168 100 12 62 chrX 165082374 165082715 -1567581 + ORR1A3 LTR MaLR 1 324 -2 1 1844 502 212 147 21 chrX 165082715 165082859 -1567437 - B3 SINE B2 -38 157 1 1 1844 210 227 198 83 chrX 165082879 165082975 -1567321 - PB1D7 SINE Alu -13 107 1 1 1844 268 209 239 0 chrX 165082911 165082978 -1567318 - ID_B1 SINE B4 -63 161 79 1 1844 612 249 98 39 chrX 165083798 165084053 -1566243 + B4 SINE B4 5 274 -18 1 1844 213 116 22 44 chrX 165084088 165084133 -1566163 + A-rich Low_complexity Low_complexity 5 48 0 1 1844 693 186 82 7 chrX 165084684 165084830 -1565466 + B3 SINE B2 1 157 -59 1 1844 270 0 0 0 chrX 165084833 165084863 -1565433 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1844 393 297 44 57 chrX 165084957 165085163 -1565133 + B4A SINE B4 35 241 -51 1 1844 351 0 0 0 chrX 165085260 165085299 -1564997 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 1 1844 281 319 59 17 chrX 165085372 165085490 -1564806 - Tigger5 DNA MER2_type -2260 146 24 1 1844 830 297 4 18 chrX 165086279 165086505 -1563791 + ID_B1 SINE B4 1 223 -1 1 1844 233 160 20 0 chrX 165086505 165086555 -1563741 + (CAA)n Simple_repeat Simple_repeat 1 51 0 1 1844 397 318 43 43 chrX 165086798 165086814 -1563482 + RSINE1 SINE B4 4 19 -146 1 1844 405 0 0 0 chrX 165086814 165086859 -1563437 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1844 397 318 43 43 chrX 165086859 165087003 -1563293 + RSINE1 SINE B4 20 164 -1 1 1844 1292 102 11 0 chrX 165087053 165087229 -1563067 + B2_Mm2 SINE B2 2 179 -16 1 1844 384 269 19 0 chrX 165087805 165087913 -1562383 + MER5A1 DNA MER1_type 11 120 -46 1 1844 517 301 128 38 chrX 165088027 165088262 -1562034 - B4A SINE B4 -35 257 2 1 1844 225 204 0 0 chrX 165088494 165088538 -1561758 - ID4_ SINE ID -38 45 2 1 1844 221 259 52 0 chrX 165088612 165088670 -1561626 - B1_Mur3 SINE Alu -1 148 88 2 1844 382 227 0 33 chrX 165088621 165088712 -1561584 - ID_B1 SINE B4 -10 214 127 2 1844 261 321 143 26 chrX 165088736 165088822 -1561474 - Lx8 LINE L1 -1 7472 7379 2 1844 373 19 18 18 chrX 165088822 165088877 -1561419 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 1844 261 321 143 26 chrX 165088877 165089020 -1561276 - Lx8 LINE L1 -95 7378 7217 2 1844 1366 215 122 6 chrX 165089167 165089486 -1560810 - MTEa LTR MaLR -20 359 4 2 1844 5993 245 53 14 chrX 165089491 165091010 -1559286 - MTEa-int LTR MaLR -2 1578 1 2 1844 1415 242 86 3 chrX 165091013 165091361 -1558935 - MTEa LTR MaLR -2 377 1 2 1844 510 108 0 0 chrX 165091672 165091755 -1558541 + (GA)n Simple_repeat Simple_repeat 1 83 0 2 1844 23 54 0 0 chrX 165092552 165092589 -1557707 + AT_rich Low_complexity Low_complexity 1 37 0 2 1844 259 279 16 0 chrX 165093427 165093488 -1556808 + AluF_3 SINE Alu 139 200 -111 2 1844 201 121 0 0 chrX 165094713 165094746 -1555550 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1844 333 321 35 26 chrX 165095279 165095394 -1554902 + Lx8 LINE L1 7157 7272 -201 2 1844 324 0 0 0 chrX 165095429 165095465 -1554831 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1844 1586 92 0 4 chrX 165095563 165095792 -1554504 + ORR1A2 LTR MaLR 1 228 -99 2 1844 2098 102 11 17 chrX 165095789 165096138 -1554158 + ORR1A2-int LTR MaLR 1617 1963 0 2 1844 2377 102 9 0 chrX 165096138 165096462 -1553834 + ORR1A2 LTR MaLR 1 327 0 2 1844 979 223 45 13 chrX 165096850 165097109 -1553187 - ORR1E LTR MaLR -76 303 1 2 1844 1379 45 11 0 chrX 165098002 165098180 -1552116 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 1844 362 304 144 5 chrX 165098690 165098885 -1551411 + MER58B DNA MER1_type 109 330 -11 2 1844 1801 38 0 0 chrX 165098901 165099111 -1551185 + L1Md_F2 LINE L1 5377 5586 -297 2 1844 8233 49 0 2 chrX 165099111 165100104 -1550192 + L1Md_F2 LINE L1 5587 6577 -5 2 1844 777 197 171 20 chrX 165100655 165100805 -1549491 + L1MB8 LINE L1 5827 6002 -176 2 1844 189 0 0 0 chrX 165100805 165100826 -1549470 + (TGGGGG)n Simple_repeat Simple_repeat 4 24 0 2 1844 777 197 171 20 chrX 165100826 165100980 -1549316 + L1MB8 LINE L1 6003 6176 -2 2 1844 707 203 153 6 chrX 165101019 165101202 -1549094 + B3 SINE B2 2 211 -5 2 1844 358 279 30 109 chrX 165102472 165102637 -1547659 + MER20 DNA MER1_type 23 174 -45 2 1844 246 332 95 45 chrX 165103025 165103268 -1547028 + Lx8 LINE L1 7032 7286 -187 2 1844 5920 58 12 3 chrX 165103666 165104414 -1545882 - L1_Mus1 LINE L1 0 6567 5813 2 1844 409 298 57 16 chrX 165104529 165104652 -1545644 - B1F SINE Alu -21 128 1 2 1844 682 216 0 21 chrX 165105158 165105300 -1544996 - B1_Mur1 SINE Alu 0 149 11 2 1844 498 282 64 147 chrX 165105606 165105696 -1544600 + B4 SINE B4 7 85 -207 2 1844 1328 73 28 0 chrX 165105696 165105875 -1544421 + B2_Mm2 SINE B2 2 185 -10 2 1844 498 282 64 147 chrX 165105875 165106096 -1544200 + B4 SINE B4 86 291 -1 2 1844 276 286 13 0 chrX 165106416 165106493 -1543803 + ID4 SINE ID 6 83 0 2 1844 422 204 93 46 chrX 165107055 165107163 -1543133 - B1_Mur2 SINE Alu -36 113 1 2 1844 271 301 65 43 chrX 165107163 165107191 -1543105 - ID_B1 SINE B4 -29 192 54 2 1844 228 288 0 0 chrX 165108040 165108113 -1542183 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 2 1844 405 264 75 6 chrX 165108746 165108906 -1541390 - Tigger5 DNA MER2_type -86 2320 2150 2 1844 1056 78 28 21 chrX 165109296 165109441 -1540855 + B1_Mus1 SINE Alu 3 148 0 2 1844 267 0 83 33 chrX 165109449 165109509 -1540787 + (CAAAA)n Simple_repeat Simple_repeat 2 64 0 2 1844 405 0 0 0 chrX 165113665 165113710 -1536586 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 1844 571 109 15 23 chrX 165113710 165113842 -1536454 + (TG)n Simple_repeat Simple_repeat 1 131 0 2 1844 200 355 47 39 chrX 165114025 165114154 -1536142 - L2c LINE L2 0 3387 3258 2 1844 315 266 0 60 chrX 165114271 165114355 -1535941 - PB1 SINE Alu -28 99 21 2 1844 866 240 47 0 chrX 165115144 165115336 -1534960 + ID_B1 SINE B4 1 201 -23 2 1844 319 232 60 12 chrX 165115579 165115662 -1534634 + MTD LTR MaLR 1 87 -334 2 1844 841 199 111 24 chrX 165115768 165116042 -1534254 + MTD LTR MaLR 74 419 0 2 1844 671 280 109 44 chrX 165116043 165116382 -1533914 + MTD-int LTR MaLR 1 399 -699 2 1844 378 261 26 18 chrX 165116391 165116504 -1533792 + Lx7 LINE L1 7100 7213 -483 2 1844 303 280 84 0 chrX 165116741 165116848 -1533448 + Lx7 LINE L1 7579 7694 -2 2 1844 336 301 21 0 chrX 165116899 165116992 -1533304 + MTD-int LTR MaLR 395 489 -769 2 1844 787 196 128 9 chrX 165116989 165117200 -1533096 + MTD LTR MaLR 186 421 0 2 1844 1562 73 107 0 chrX 165117227 165117432 -1532864 + L1_Mus2 LINE L1 6340 6566 0 2 1844 287 241 48 60 chrX 165117481 165117565 -1532731 + MTD LTR MaLR 122 210 -209 2 1844 563 191 0 45 chrX 165117575 165117685 -1532611 + B1F2 SINE Alu 44 148 -1 2 1844 1552 121 0 30 chrX 165118332 165118563 -1531733 - URR1B DNA MER1_type 0 225 2 2 1844 629 221 72 51 chrX 165119045 165119183 -1531113 - ID_B1 SINE B4 0 224 84 2 1844 195 328 15 0 chrX 165119197 165119264 -1531032 - MIRc SINE MIR -115 153 86 2 1844 273 289 0 0 chrX 165119830 165119906 -1530390 - Lx8 LINE L1 -294 7179 7104 2 1844 1020 251 86 22 chrX 165120136 165120259 -1530037 + B4A SINE B4 1 137 -155 2 1844 2952 43 3 23 chrX 165120259 165120612 -1529684 + ORR1A1 LTR MaLR 1 346 0 2 1844 14875 54 8 1 chrX 165120612 165122391 -1527905 + ORR1A1-int LTR MaLR 1 1792 0 2 1844 3029 43 0 23 chrX 165122391 165122745 -1527551 + ORR1A1 LTR MaLR 1 346 0 2 1844 1020 251 86 22 chrX 165122745 165122888 -1527408 + B4A SINE B4 138 284 -8 2 1844 225 0 0 0 chrX 165122975 165123000 -1527296 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 1844 32812 82 15 1 chrX 165123042 165128077 -1522219 + L1Md_F2 LINE L1 479 5585 -298 2 1844 7550 90 11 5 chrX 165128078 165129049 -1521247 + L1Md_F2 LINE L1 5587 6563 -19 2 1844 351 0 0 0 chrX 165129049 165129088 -1521208 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2 1844 973 281 21 31 chrX 165129091 165129378 -1520918 - MTD LTR MaLR -135 284 1 2 1844 776 272 79 50 chrX 165129709 165129848 -1520448 - B4A SINE B4 -45 247 104 2 1844 2490 133 130 10 chrX 165129848 165130264 -1520032 - RMER4A LTR ERVK 0 466 1 2 1844 776 272 79 50 chrX 165130264 165130364 -1519932 - B4A SINE B4 -189 103 1 2 1844 30 69 0 0 chrX 165130740 165130798 -1519498 + AT_rich Low_complexity Low_complexity 1 58 0 2 1844 540 321 20 59 chrX 165130798 165130896 -1519400 + ID_B1 SINE B4 3 93 -131 2 1844 1120 125 85 0 chrX 165130896 165131072 -1519224 - B2_Mm2 SINE B2 -2 193 3 2 1844 540 321 20 59 chrX 165131072 165131175 -1519121 + ID_B1 SINE B4 94 196 -28 2 1844 344 125 16 0 chrX 165131683 165131747 -1518549 + (TG)n Simple_repeat Simple_repeat 1 65 0 2 1844 427 336 8 8 chrX 165131835 165131958 -1518338 - B4A SINE B4 -168 124 2 2 1844 472 289 31 0 chrX 165132507 165132635 -1517661 + ID_B1 SINE B4 91 222 -2 2 1844 369 0 0 0 chrX 165134022 165134063 -1516233 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 1844 309 118 0 0 chrX 165134179 165134230 -1516066 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1844 3216 66 5 15 chrX 165134315 165134716 -1515580 + L1_Mus2 LINE L1 6169 6565 -1 2 1844 204 280 0 0 chrX 165134719 165134794 -1515502 + A-rich Low_complexity Low_complexity 1 75 0 2 1844 558 259 67 55 chrX 165136652 165136811 -1513485 - ID_B1 SINE B4 0 224 69 2 1844 21 57 0 0 chrX 165136811 165136846 -1513450 + AT_rich Low_complexity Low_complexity 1 35 0 2 1844 230 81 0 26 chrX 165136908 165136946 -1513350 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 1844 1772 118 115 0 chrX 165137931 165138218 -1512078 - ORR1A2 LTR MaLR -7 320 1 2 1844 11250 134 71 18 chrX 165138218 165140083 -1510213 - ORR1A2-int LTR MaLR 0 1963 1 2 1844 2455 108 9 0 chrX 165140083 165140407 -1509889 - ORR1A2 LTR MaLR 0 327 1 2 1844 1620 255 69 26 chrX 165140409 165140428 -1509868 - Lx8 LINE L1 -244 7229 7214 2 1844 2293 164 28 23 chrX 165140428 165140820 -1509476 - ORR1B1 LTR MaLR 0 394 1 2 1844 1620 255 69 26 chrX 165140820 165141223 -1509073 - Lx8 LINE L1 -260 7213 6789 2 1844 219 69 0 0 chrX 165141235 165141264 -1509032 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1844 318 153 21 242 chrX 165141281 165141376 -1508920 - PB1D9 SINE Alu -46 74 1 2 1844 515 333 26 98 chrX 165142201 165142282 -1508014 + B4 SINE B4 3 78 -214 2 1844 960 285 123 16 chrX 165142282 165142656 -1507640 - MTD LTR MaLR -1 418 5 2 1844 515 333 26 98 chrX 165142656 165142880 -1507416 + B4 SINE B4 79 286 -6 2 1844 246 175 0 0 chrX 165142937 165142977 -1507319 - MLT1A1 LTR MaLR -320 88 49 2 1844 512 207 139 15 chrX 165143197 165143334 -1506962 + ID_B1 SINE B4 63 216 -8 2 1844 242 109 0 42 chrX 165143335 165143383 -1506913 + GA-rich Low_complexity Low_complexity 4 49 0 2 1844 496 323 42 84 chrX 165143999 165144286 -1506010 - B4A SINE B4 -17 275 1 2 1844 489 110 0 0 chrX 165144379 165144452 -1505844 + (TTCC)n Simple_repeat Simple_repeat 3 75 0 2 1844 945 42 8 0 chrX 165144466 165144586 -1505710 - B1_Mus2 SINE Alu 0 147 27 2 1844 281 308 58 25 chrX 165145003 165145071 -1505225 - MER5A1 DNA MER1_type -42 124 59 2 1844 1526 223 80 0 chrX 165145071 165145408 -1504888 + ORR1D2 LTR MaLR 4 367 -3 2 1844 281 308 58 25 chrX 165145408 165145459 -1504837 - MER5A1 DNA MER1_type -108 58 1 2 1844 254 319 159 20 chrX 165145517 165145712 -1504584 + MIRc SINE MIR 9 230 -38 2 1844 25 0 0 0 chrX 165146460 165146485 -1503811 + AT_rich Low_complexity Low_complexity 1 25 0 2 1844 432 147 0 0 chrX 165146588 165146663 -1503633 + (T)n Simple_repeat Simple_repeat 1 75 0 2 1844 269 304 113 49 chrX 165146670 165146812 -1503484 + MER20 DNA MER1_type 69 219 0 2 1844 459 0 0 0 chrX 165147296 165147347 -1502949 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1844 30 45 0 0 chrX 165147866 165147910 -1502386 + AT_rich Low_complexity Low_complexity 1 44 0 2 1844 579 315 28 7 chrX 165147941 165148085 -1502211 - RSINE1 SINE B4 -4 161 15 2 1844 256 331 494 7 chrX 165148109 165148259 -1502037 - ID_B1 SINE B4 -1 223 1 2 1844 4046 71 2 2 chrX 165148285 165148797 -1501499 - L1_Mus1 LINE L1 0 6567 6071 2 1844 4070 53 0 2 chrX 165148797 165149331 -1500965 + L1_Mus1 LINE L1 5544 6076 -491 2 1844 395 220 207 25 chrX 165149353 165149474 -1500822 + ORR1E LTR MaLR 1 143 -216 2 1844 458 271 6 66 chrX 165149661 165149827 -1500469 - L1MA7 LINE L1 -337 5954 5799 2 1844 743 260 164 89 chrX 165149868 165150186 -1500110 - L1MA7 LINE L1 -579 5712 5351 2 1844 820 178 14 22 chrX 165150186 165150324 -1499972 + B1_Mur2 SINE Alu 3 139 -10 2 1844 743 264 124 77 chrX 165150324 165150572 -1499724 - L1MA7 LINE L1 -941 5350 5118 2 1845 872 232 36 122 chrX 165150813 165151117 -1499179 + RMER15 LTR ERVL 296 573 -2 2 1845 285 29 0 0 chrX 165151138 165151172 -1499124 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1845 257 259 142 9 chrX 165151579 165151692 -1498604 + RMER5 LTR ERV1 31 158 -376 2 1845 822 296 21 155 chrX 165151979 165152033 -1498263 - ORR1D2 LTR MaLR 0 370 328 2 1845 2410 105 26 3 chrX 165152033 165152385 -1497911 + L1_Mus4 LINE L1 6272 6631 -5 2 1845 822 296 21 155 chrX 165152385 165152757 -1497539 - ORR1D2 LTR MaLR -43 327 1 2 1845 1173 262 107 10 chrX 165152902 165153296 -1497000 + RMER5 LTR ERV1 70 501 -33 3 1845 692 285 77 10 chrX 165153303 165153498 -1496798 + B4 SINE B4 74 281 -11 3 1845 23 33 0 0 chrX 165154290 165154320 -1495976 + AT_rich Low_complexity Low_complexity 1 30 0 3 1845 577 325 106 49 chrX 165154321 165154586 -1495710 - B4 SINE B4 -12 280 1 3 1845 195 42 0 0 chrX 165154598 165154622 -1495674 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 3 1845 25 31 0 0 chrX 165154871 165154903 -1495393 + AT_rich Low_complexity Low_complexity 1 32 0 3 1845 242 233 47 0 chrX 165154956 165155042 -1495254 - L1MEg LINE L1 -5146 938 849 3 1845 303 337 10 0 chrX 165155390 165155488 -1494808 + MER58B DNA MER1_type 1 99 -242 3 1845 373 280 27 40 chrX 165155486 165155635 -1494661 - B3A SINE B2 -4 194 48 3 1845 640 281 73 9 chrX 165155666 165155899 -1494397 + MER58B DNA MER1_type 78 334 -7 3 1845 650 256 6 59 chrX 165156470 165156640 -1493656 - RSINE1 SINE B4 -2 163 3 3 1845 1027 134 214 5 chrX 165156961 165157148 -1493148 - URR1A DNA MER1_type 0 226 1 3 1845 947 196 201 0 chrX 165157153 165157332 -1492964 - B3 SINE B2 0 216 2 3 1845 7551 66 0 1 chrX 165157425 165158381 -1491915 - L1_Mus1 LINE L1 0 6567 5632 3 1845 477 241 0 0 chrX 165159004 165159087 -1491209 - ID4_ SINE ID 0 83 1 3 1845 4411 78 2 7 chrX 165159263 165159817 -1490479 - L1Md_F2 LINE L1 -11 6571 6021 3 1845 780 269 61 19 chrX 165159817 165160029 -1490267 - ID_B1 SINE B4 -3 221 1 3 1845 326 247 0 138 chrX 165160383 165160422 -1489874 + PB1D10 SINE Alu 24 62 -55 3 1845 3204 146 61 39 chrX 165160422 165160962 -1489334 + Lx4A LINE L1 6504 7055 -3 3 1845 326 247 0 138 chrX 165160962 165161016 -1489280 + PB1D10 SINE Alu 63 104 -13 3 1845 624 27 0 0 chrX 165161016 165161090 -1489206 + (GA)n Simple_repeat Simple_repeat 1 74 0 3 1845 234 282 27 27 chrX 165161114 165161187 -1489109 - MTEa LTR MaLR -209 170 98 3 1845 489 243 75 29 chrX 165161209 165161383 -1488913 + Lx5 LINE L1 6869 7050 0 3 1845 255 61 0 0 chrX 165161778 165161811 -1488485 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 3 1845 27 49 0 0 chrX 165161824 165161865 -1488431 + AT_rich Low_complexity Low_complexity 1 41 0 3 1845 270 331 116 50 chrX 165162272 165162453 -1487843 - MLT1C LTR MaLR -269 198 6 3 1845 1158 122 0 0 chrX 165162997 165163177 -1487119 + (TTTTC)n Simple_repeat Simple_repeat 1 180 0 3 1845 362 315 0 0 chrX 165163269 165163358 -1486938 - ID_B1 SINE B4 -130 94 6 3 1845 266 351 75 15 chrX 165163793 165163926 -1486370 + MER20 DNA MER1_type 13 153 -66 3 1845 736 311 65 76 chrX 165163952 165164057 -1486239 + ORR1E LTR MaLR 9 98 -261 3 1845 2785 63 0 3 chrX 165164057 165164389 -1485907 - L1_Mus2 LINE L1 0 6566 6236 3 1845 736 311 65 76 chrX 165164389 165164638 -1485658 + ORR1E LTR MaLR 99 359 0 3 1845 316 233 150 0 chrX 165166044 165166164 -1484132 - Lx7 LINE L1 0 7696 7559 3 1845 766 194 25 13 chrX 165166236 165166393 -1483903 - Lx7 LINE L1 -282 7414 7256 3 1845 418 250 26 18 chrX 165166400 165166514 -1483782 + MER20 DNA MER1_type 18 132 -87 3 1845 439 271 293 19 chrX 165166764 165167166 -1483130 + LTR50 LTR ERVL 93 684 -111 3 1845 228 292 56 0 chrX 165167178 165167250 -1483046 + LTR50 LTR ERVL 718 793 -2 3 1845 922 250 15 0 chrX 165167281 165167481 -1482815 - B3 SINE B2 -13 203 1 3 1845 642 222 136 0 chrX 165167560 165167736 -1482560 - RMER1C Other Other 0 1342 1143 3 1845 5412 146 6 1 chrX 165168554 165169066 -1481230 + Lx2B LINE L1 4926 5439 -438 3 1845 3161 44 5 0 chrX 165169066 165169455 -1480841 + L1Md_F2 LINE L1 6192 6582 0 3 1845 8092 143 31 2 chrX 165169455 165170840 -1479456 + Lx2B LINE L1 5440 6865 -135 3 1845 198 0 0 0 chrX 165170840 165170862 -1479434 + (TGGG)n Simple_repeat Simple_repeat 4 25 0 3 1845 8092 142 34 2 chrX 165170862 165170979 -1479317 + Lx2B LINE L1 6866 6993 -7 3 1845 297 0 0 0 chrX 165172010 165172043 -1478253 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 1845 277 111 0 0 chrX 165172043 165172088 -1478208 + MT2A LTR ERVL 489 533 0 3 1845 304 114 0 0 chrX 165172088 165172132 -1478164 + ORR1D2 LTR MaLR 325 368 -2 3 1845 1503 146 0 0 chrX 165172584 165172810 -1477486 + URR1A DNA MER1_type 1 226 0 3 1845 1197 76 0 0 chrX 165173064 165173223 -1477073 + B2_Mm2 SINE B2 1 160 -33 3 1845 228 67 0 0 chrX 165173223 165173253 -1477043 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 3 1845 1147 102 11 17 chrX 165173253 165173273 -1477023 + B2_Mm1t SINE B2 161 179 -14 3 1845 627 239 26 97 chrX 165173420 165173615 -1476681 + B3A SINE B2 2 182 -16 3 1845 2735 70 33 57 chrX 165174641 165175062 -1475234 + RLTR10A LTR ERVK 1 411 0 3 1845 265 271 0 0 chrX 165175594 165175664 -1474632 - Lx8 LINE L1 -164 7309 7240 3 1845 475 188 109 36 chrX 165175754 165175892 -1474404 + Lx8 LINE L1 6936 7083 -390 3 1845 198 0 0 0 chrX 165176103 165176125 -1474171 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 3 1845 519 256 85 0 chrX 165176140 165176269 -1474027 - B1_Mur1 SINE Alu -8 141 2 3 1845 580 255 75 0 chrX 165176789 165176977 -1473319 + RMER21B LTR ERV1 254 455 -387 3 1845 2403 74 12 0 chrX 165177108 165177431 -1472865 - L1_Mus1 LINE L1 0 6567 6241 3 1845 855 42 0 8 chrX 165177429 165177549 -1472747 + L1Md_F3 LINE L1 6452 6570 -14 3 1845 4445 91 19 102 chrX 165177553 165178340 -1471956 + MTA_Mm-int LTR MaLR 377 1098 0 3 1845 1795 51 30 0 chrX 165178340 165178576 -1471720 + MTA_Mm LTR MaLR 1 243 -153 3 1845 4647 52 2 7 chrX 165178596 165179177 -1471119 - L1Md_F2 LINE L1 0 6582 6005 3 1845 3683 37 95 1 chrX 165179179 165180143 -1470153 - L1Md_F2 LINE L1 -12 6570 5516 3 1845 20687 76 9 7 chrX 165180140 165183992 -1466304 - L1Md_F2 LINE L1 -1638 4245 387 3 1845 11283 168 32 4 chrX 165184000 165185666 -1464630 - MERVL_2A-int LTR ERVL -2266 3495 1774 3 1845 345 47 0 0 chrX 165185666 165185709 -1464587 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1845 11283 168 32 4 chrX 165185709 165186101 -1464195 - MERVL_2A-int LTR ERVL -3988 1773 1379 3 1845 656 66 55 0 chrX 165186101 165186192 -1464104 - L1Md_F2 LINE L1 -492 6090 5995 3 1845 2303 42 0 0 chrX 165186182 165186468 -1463828 + L1Md_F2 LINE L1 6066 6351 -231 3 1845 632 40 40 0 chrX 165186468 165186568 -1463728 + L1Md_F2 LINE L1 6475 6578 -4 3 1845 1341 166 7 22 chrX 165186568 165186840 -1463456 - MERVL_2A-int LTR ERVL -4372 1389 1122 3 1845 675 276 36 88 chrX 165187560 165187922 -1462374 - RLTR15 LTR ERVK -16 343 1 3 1845 226 286 0 0 chrX 165188107 165188156 -1462140 + ID SINE ID 1 49 -175 3 1845 6813 62 4 2 chrX 165188157 165189065 -1461231 + L1_Mus1 LINE L1 5657 6566 -1 3 1845 411 255 317 0 chrX 165189077 165189222 -1461074 + ID_B1 SINE B4 27 217 -7 3 1845 347 291 213 15 chrX 165189536 165189672 -1460624 - RSINE1 SINE B4 0 165 3 3 1845 1329 173 24 24 chrX 165189759 165190008 -1460288 + ORR1B2 LTR MaLR 119 367 0 3 1845 446 280 114 41 chrX 165190682 165190805 -1459491 + RSINE1 SINE B4 5 136 -29 3 1845 449 341 7 15 chrX 165191188 165191325 -1458971 - MER5A1 DNA MER1_type -11 155 20 3 1845 4198 173 64 74 chrX 165191325 165192219 -1458077 + RMER19B LTR ERVK 1 885 -17 3 1845 360 303 40 33 chrX 165192134 165192284 -1458012 - RMER19B LTR ERVK -57 845 695 3 1845 195 222 0 0 chrX 165192717 165192762 -1457534 + CT-rich Low_complexity Low_complexity 2 46 0 3 1845 322 0 0 0 chrX 165192834 165192878 -1457418 - L1_Mus1 LINE L1 -1 6566 6523 3 1845 776 283 15 0 chrX 165192878 165193083 -1457213 - ID_B1 SINE B4 -16 208 1 3 1845 27 29 0 0 chrX 165193350 165193384 -1456912 + AT_rich Low_complexity Low_complexity 1 34 0 3 1845 22 0 0 0 chrX 165194140 165194162 -1456134 + AT_rich Low_complexity Low_complexity 1 22 0 3 1845 194 0 39 0 chrX 165194163 165194189 -1456107 + (CAAA)n Simple_repeat Simple_repeat 4 30 0 3 1845 639 203 39 65 chrX 165194269 165194422 -1455874 + B1_Mur1 SINE Alu 1 149 0 3 1845 987 297 78 17 chrX 165194714 165195190 -1455106 + ORSL-2b DNA Tip100 4 508 0 3 1845 6596 132 5 64 chrX 165195528 165197290 -1453006 - Lx LINE L1 -12 6642 4985 3 1845 13736 88 42 35 chrX 165197303 165198944 -1451352 - L1_Mus1 LINE L1 0 6567 4858 3 1845 238 274 51 31 chrX 165198944 165199042 -1451254 + MER72B LTR ERV1 288 387 -381 3 1845 13736 88 42 35 chrX 165199042 165200236 -1450060 - L1_Mus1 LINE L1 0 4857 3611 3 1845 3767 112 15 14 chrX 165200229 165201288 -1449008 - L1VL4 LINE L1 -2101 1458 403 3 1845 716 326 50 23 chrX 165201320 165201540 -1448756 + B4A SINE B4 1 226 -66 3 1845 271 284 0 0 chrX 165201556 165201630 -1448666 + (CA)n Simple_repeat Simple_repeat 1 74 0 3 1845 1885 230 51 24 chrX 165201657 165202125 -1448171 + Lx5 LINE L1 6532 7012 -38 3 1845 408 40 0 0 chrX 165202156 165202206 -1448090 + (CATA)n Simple_repeat Simple_repeat 4 53 0 3 1845 212 321 89 13 chrX 165202275 165202354 -1447942 - MIRm SINE MIR -16 260 176 3 1845 1427 215 123 12 chrX 165202666 165203000 -1447296 + MTE2a LTR MaLR 1 371 -8 3 1845 22 0 0 0 chrX 165203188 165203210 -1447086 + AT_rich Low_complexity Low_complexity 1 22 0 3 1845 264 30 0 0 chrX 165203382 165203415 -1446881 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1845 312 291 0 25 chrX 165203419 165203500 -1446796 - RMER15 LTR ERVL -105 470 392 3 1845 283 250 150 67 chrX 165204038 165204158 -1446138 + B1F SINE Alu 19 148 -1 3 1845 795 240 23 9 chrX 165204351 165204570 -1445726 + Lx7 LINE L1 7211 7432 -264 3 1845 322 316 0 22 chrX 165204615 165204751 -1445545 + Lx7 LINE L1 7559 7691 -5 3 1845 873 287 64 24 chrX 165205381 165205631 -1444665 + B4A SINE B4 10 269 -23 3 1845 369 62 0 0 chrX 165205681 165205729 -1444567 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1845 679 234 7 14 chrX 165206357 165206500 -1443796 + B3 SINE B2 2 143 -73 3 1845 387 0 0 0 chrX 165206502 165206545 -1443751 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1845 1735 208 94 115 chrX 165207009 165207471 -1442825 + Lx7 LINE L1 7098 7521 -175 3 1845 213 39 0 0 chrX 165207471 165207497 -1442799 + (CATAT)n Simple_repeat Simple_repeat 3 28 0 3 1845 1735 208 94 115 chrX 165207497 165207643 -1442653 + Lx7 LINE L1 7522 7693 -3 3 1845 542 268 18 60 chrX 165207789 165207880 -1442416 - RSINE1 SINE B4 0 165 79 3 1845 3625 128 79 11 chrX 165207880 165208218 -1442078 + RMER6C LTR ERVK 1 346 -344 3 1845 351 0 0 0 chrX 165208218 165208257 -1442039 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1845 3625 128 79 11 chrX 165208257 165208564 -1441732 + RMER6C LTR ERVK 347 690 0 3 1845 542 268 18 60 chrX 165208564 165208639 -1441657 - RSINE1 SINE B4 -87 78 6 3 1845 2150 106 48 3 chrX 165209190 165209502 -1440794 - ORR1A3 LTR MaLR 0 326 1 3 1845 6773 58 3 28 chrX 165209541 165210444 -1439852 + L1Md_F2 LINE L1 5702 6582 0 4 1845 618 14 0 0 chrX 165211306 165211377 -1438919 + (TC)n Simple_repeat Simple_repeat 2 72 0 4 1845 312 48 0 0 chrX 165211377 165211418 -1438878 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1845 22 35 0 0 chrX 165211903 165211932 -1438364 + AT_rich Low_complexity Low_complexity 1 29 0 4 1845 477 47 0 0 chrX 165212570 165212634 -1437662 + (GTTTG)n Simple_repeat Simple_repeat 2 65 0 4 1845 720 182 30 0 chrX 165212637 165212769 -1437527 - B1F2 SINE Alu -13 136 1 4 1845 324 161 0 0 chrX 165213171 165213233 -1437063 + CT-rich Low_complexity Low_complexity 2 63 0 4 1845 219 218 0 0 chrX 165213348 165213403 -1436893 + (TA)n Simple_repeat Simple_repeat 2 56 0 4 1845 22 56 0 0 chrX 165213484 165213520 -1436776 + AT_rich Low_complexity Low_complexity 1 36 0 4 1845 217 337 50 10 chrX 165214530 165214629 -1435667 - MIR SINE MIR -49 213 111 4 1845 332 283 77 71 chrX 165214804 165215090 -1435206 + MTEa LTR MaLR 85 379 0 4 1845 310 115 16 16 chrX 165215258 165215320 -1434976 + (TCTCCC)n Simple_repeat Simple_repeat 1 62 0 4 1845 21 0 0 0 chrX 165215507 165215528 -1434768 + AT_rich Low_complexity Low_complexity 1 21 0 4 1845 954 177 137 6 chrX 165215544 165215726 -1434570 - B3 SINE B2 -10 206 1 4 1845 22 0 0 0 chrX 165215990 165216012 -1434284 + AT_rich Low_complexity Low_complexity 1 22 0 4 1845 219 36 0 0 chrX 165216392 165216420 -1433876 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1845 250 45 22 22 chrX 165216944 165216989 -1433307 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 4 1845 229 26 53 0 chrX 165217988 165218026 -1432270 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 4 1845 409 267 157 8 chrX 165218042 165218163 -1432133 + RSINE1 SINE B4 3 141 -24 4 1845 468 0 0 0 chrX 165218179 165218231 -1432065 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1845 817 247 30 56 chrX 165218285 165218551 -1431745 + Lx7 LINE L1 7047 7305 -391 4 1845 207 0 0 0 chrX 165218552 165218575 -1431721 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 1845 393 39 0 0 chrX 165218575 165218625 -1431671 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1845 306 106 0 0 chrX 165218701 165218748 -1431548 + (T)n Simple_repeat Simple_repeat 1 47 0 4 1845 581 50 88 0 chrX 165218823 165218903 -1431393 - BC1_Mm scRNA scRNA -65 87 1 4 1845 26 0 0 0 chrX 165218904 165218930 -1431366 + AT_rich Low_complexity Low_complexity 1 26 0 4 1845 743 185 15 0 chrX 165220237 165220372 -1429924 + B1_Mur4 SINE Alu 1 137 -13 4 1845 189 0 0 0 chrX 165220372 165220393 -1429903 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1845 777 222 169 0 chrX 165220835 165221042 -1429254 + MER2 DNA MER2_type 104 345 0 4 1845 285 308 48 32 chrX 165221810 165221934 -1428362 + MIRb SINE MIR 107 232 -36 4 1845 372 271 104 28 chrX 165222974 165223118 -1427178 - RSINE1 SINE B4 -1 164 10 4 1845 221 102 0 39 chrX 165223172 165223223 -1427073 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 4 1845 1045 255 31 21 chrX 165223575 165223863 -1426433 - MLT1C LTR MaLR -8 459 169 4 1845 21 71 0 0 chrX 165223959 165224001 -1426295 + AT_rich Low_complexity Low_complexity 1 42 0 4 1845 605 337 6 0 chrX 165224020 165224198 -1426098 - B3A SINE B2 -18 180 2 4 1845 311 247 110 12 chrX 165224201 165224283 -1426013 - B4A SINE B4 -199 93 4 4 1845 489 300 21 21 chrX 165224288 165224431 -1425865 - B1F1 SINE Alu -3 146 4 4 1845 306 345 32 32 chrX 165224323 165224446 -1425850 - B4A SINE B4 -93 199 77 4 1845 30 45 0 0 chrX 165225051 165225095 -1425201 + AT_rich Low_complexity Low_complexity 1 44 0 4 1845 1095 139 0 0 chrX 165225198 165225378 -1424918 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 1845 1461 237 34 19 chrX 165225409 165225981 -1424315 - Lx7 LINE L1 -207 7489 6882 4 1845 1310 121 5 0 chrX 165226179 165226369 -1423927 + B2_Mm1t SINE B2 1 191 -2 4 1845 739 287 54 68 chrX 165226636 165226931 -1423365 + B4A SINE B4 2 292 0 4 1845 880 251 55 0 chrX 165228152 165228351 -1421945 + B3 SINE B2 3 212 -4 4 1845 21 0 0 0 chrX 165228351 165228372 -1421924 + AT_rich Low_complexity Low_complexity 1 21 0 4 1845 545 239 0 9 chrX 165228646 165228756 -1421540 - PB1D9 SINE Alu -2 118 10 4 1845 186 43 0 0 chrX 165228874 165228897 -1421399 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 4 1845 797 262 153 16 chrX 165228901 165229299 -1420997 - Lx3C LINE L1 -15 6961 6502 4 1845 22 0 0 0 chrX 165229442 165229464 -1420832 + AT_rich Low_complexity Low_complexity 1 22 0 4 1845 259 279 66 31 chrX 165229482 165229678 -1420618 + Lx8 LINE L1 5735 5937 -1536 4 1845 207 146 0 0 chrX 165229852 165229893 -1420403 + (TCC)n Simple_repeat Simple_repeat 3 43 0 4 1845 23 33 0 0 chrX 165229912 165229942 -1420354 + AT_rich Low_complexity Low_complexity 1 30 0 4 1845 305 223 73 55 chrX 165230184 165230293 -1420003 + PB1D10 SINE Alu 7 117 0 4 1845 22 0 0 0 chrX 165230388 165230410 -1419886 + AT_rich Low_complexity Low_complexity 1 22 0 4 1845 287 271 206 10 chrX 165231341 165231438 -1418858 + B1_Mur1 SINE Alu 1 116 -33 4 1845 264 268 0 164 chrX 165231438 165231455 -1418841 + MT2B LTR ERVL 165 259 -342 4 1845 1613 164 2 160 chrX 165231494 165231887 -1418409 - MTC LTR MaLR -90 331 1 4 1845 384 22 0 0 chrX 165235087 165235132 -1415164 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1845 258 176 0 0 chrX 165236005 165236056 -1414240 + GA-rich Low_complexity Low_complexity 2 52 0 4 1845 1958 189 73 18 chrX 165236759 165237158 -1413138 - MTC LTR MaLR 0 421 1 4 1845 324 0 0 0 chrX 165237618 165237654 -1412642 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 4 1845 1665 11 11 0 chrX 165238055 165238245 -1412051 - B2_Mm1a SINE B2 0 193 2 4 1845 429 302 96 54 chrX 165238432 165238712 -1411584 - B4 SINE B4 0 292 1 4 1845 2123 100 164 23 chrX 165239148 165239303 -1410993 - RMER10B LTR ERVL 0 398 217 4 1845 530 29 15 0 chrX 165239303 165239371 -1410925 + (GA)n Simple_repeat Simple_repeat 1 69 0 4 1845 2123 100 164 23 chrX 165239371 165239562 -1410734 - RMER10B LTR ERVL -182 216 5 4 1845 875 272 187 53 chrX 165239647 165240081 -1410215 - MLT1D LTR MaLR -13 492 1 4 1845 236 301 48 0 chrX 165240091 165240174 -1410122 + MER20 DNA MER1_type 93 179 -40 4 1845 270 202 19 39 chrX 165240753 165240856 -1409440 + CT-rich Low_complexity Low_complexity 3 103 0 4 1845 486 176 22 0 chrX 165241135 165241226 -1409070 - PB1D9 SINE Alu -8 112 20 4 1845 760 280 75 13 chrX 165241454 165241682 -1408614 + B4 SINE B4 33 274 -18 4 1845 2024 134 0 73 chrX 165241843 165242198 -1408098 + ORR1A4 LTR MaLR 1 329 0 4 1845 1600 266 65 42 chrX 165242666 165243404 -1406892 + L1MB7 LINE L1 5401 6155 -29 4 1845 4640 35 2 0 chrX 165244657 165245234 -1405062 - L1Md_F2 LINE L1 -418 6164 5587 4 1845 920 208 49 15 chrX 165245791 165245996 -1404300 + Lx6 LINE L1 7214 7425 -35 4 1845 25 0 0 0 chrX 165245997 165246022 -1404274 + AT_rich Low_complexity Low_complexity 1 25 0 4 1845 1369 231 75 26 chrX 165246491 165246837 -1403459 - ORR1D2 LTR MaLR -5 365 3 4 1845 247 281 0 0 chrX 165247422 165247479 -1402817 - ID4_ SINE ID -1 82 26 4 1845 612 259 83 98 chrX 165247555 165247760 -1402536 - ID_B1 SINE B4 -21 203 2 4 1845 508 306 91 23 chrX 165248551 165248772 -1401524 - LTR16E1 LTR ERVL -1 537 302 4 1845 1087 198 66 0 chrX 165248798 165249010 -1401286 + URR1A DNA MER1_type 1 226 0 4 1845 363 23 0 0 chrX 165249342 165249386 -1400910 + (TTG)n Simple_repeat Simple_repeat 2 45 0 4 1845 458 222 62 125 chrX 165250195 165250321 -1399975 + B3A SINE B2 30 150 -48 4 1845 477 0 0 0 chrX 165250321 165250374 -1399922 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1845 387 0 0 0 chrX 165250374 165250416 -1399880 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 1845 354 217 67 133 chrX 165250416 165250463 -1399833 + B2_Mm2 SINE B2 142 188 -7 4 1845 207 250 0 0 chrX 165250875 165250919 -1399377 - MIR SINE MIR -1 261 218 4 1845 362 372 86 13 chrX 165251106 165251342 -1398954 - MIR SINE MIR -10 258 4 4 1845 227 287 148 0 chrX 165251643 165251751 -1398545 - L1MD3 LINE L1 -8 7987 7864 4 1845 182 178 178 0 chrX 165251757 165251802 -1398494 - MER5A DNA MER1_type -129 60 8 4 1845 441 0 0 0 chrX 165251814 165251863 -1398433 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1845 306 0 0 0 chrX 165251863 165251896 -1398400 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1845 325 260 185 80 chrX 165251897 165252097 -1398199 - L1MD3 LINE L1 -166 7829 7602 4 1845 210 37 0 0 chrX 165252097 165252124 -1398172 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1845 325 260 185 80 chrX 165252124 165252161 -1398135 - L1MD3 LINE L1 -394 7601 7567 4 1845 213 39 0 0 chrX 165252431 165252457 -1397839 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1845 470 324 7 22 chrX 165254836 165254975 -1395321 - RSINE1 SINE B4 -14 151 15 4 1845 470 297 6 37 chrX 165255025 165255186 -1395110 - ID_B1 SINE B4 -4 220 65 4 1845 588 253 89 18 chrX 165255269 165255418 -1394878 - RSINE1 SINE B4 -148 144 2 4 1845 744 194 29 0 chrX 165255441 165255580 -1394716 - B1_Mur2 SINE Alu -2 147 5 4 1845 604 285 0 0 chrX 165256129 165256273 -1394023 - B1_Mur1 SINE Alu -5 144 1 4 1845 522 103 0 0 chrX 165256291 165256369 -1393927 + (CA)n Simple_repeat Simple_repeat 2 79 0 4 1845 405 0 0 0 chrX 165257043 165257088 -1393208 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1845 473 210 16 8 chrX 165257089 165257214 -1393082 - Lx9 LINE L1 -183 7461 7336 4 1845 538 271 37 48 chrX 165257519 165257708 -1392588 - ID_B1 SINE B4 -24 268 76 5 1845 470 297 6 37 chrX 165258530 165258691 -1391605 - ID_B1 SINE B4 -4 220 65 5 1845 1075 145 0 5 chrX 165258822 165259009 -1391287 - Lx2B LINE L1 -7 6993 6808 5 1845 266 338 0 24 chrX 165259540 165259622 -1390674 + RSINE1 SINE B4 3 82 -83 5 1845 243 0 0 0 chrX 165259677 165259704 -1390592 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1845 423 0 0 0 chrX 165259709 165259756 -1390540 + (GA)n Simple_repeat Simple_repeat 1 47 0 5 1845 201 133 0 0 chrX 165260525 165260555 -1389741 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1845 541 261 68 50 chrX 165260558 165260719 -1389577 - RSINE1 SINE B4 0 165 2 5 1845 902 328 119 64 chrX 165261160 165261688 -1388608 + MLT1F2 LTR MaLR 3 559 -1 5 1845 988 269 92 25 chrX 165261967 165262326 -1387970 - Lx2B LINE L1 -1 6999 6617 5 1845 807 258 33 9 chrX 165262406 165262617 -1387679 - B3 SINE B2 0 216 1 5 1845 688 257 35 25 chrX 165262710 165263029 -1387267 + L1MA4A LINE L1 5567 5888 -415 5 1845 493 260 53 0 chrX 165263071 165263090 -1387206 - Lx7 LINE L1 -1952 5744 5722 5 1845 3396 70 35 11 chrX 165263090 165263554 -1386742 - L1_Mus2 LINE L1 -14 6552 6078 5 1845 10374 87 11 63 chrX 165263554 165264926 -1385370 - L1_Mm LINE L1 -161 5722 4438 5 1845 1216 157 25 25 chrX 165264926 165265162 -1385134 - L1Md_A LINE L1 0 6582 6347 5 1845 10374 87 11 63 chrX 165265162 165265524 -1384772 - L1_Mm LINE L1 -1446 4437 4078 5 1845 26 0 0 0 chrX 165265876 165265902 -1384394 + AT_rich Low_complexity Low_complexity 1 26 0 5 1845 302 341 116 50 chrX 165266789 165266900 -1383396 - LTR16A1 LTR ERVL -34 422 300 5 1845 853 221 216 35 chrX 165266900 165267219 -1383077 + MTE2a LTR MaLR 1 377 -2 5 1845 302 341 116 50 chrX 165267219 165267348 -1382948 - LTR16A1 LTR ERVL -157 299 166 5 1845 763 300 72 17 chrX 165268205 165268497 -1381799 + MER58B DNA MER1_type 34 341 0 5 1845 462 301 63 32 chrX 165268570 165268728 -1381568 - RSINE1 SINE B4 0 165 3 5 1845 406 299 37 0 chrX 165268919 165269026 -1381270 - PB1D7 SINE Alu -9 111 1 5 1845 22 35 0 0 chrX 165270761 165270790 -1379506 + AT_rich Low_complexity Low_complexity 1 29 0 5 1845 1147 243 103 40 chrX 165271387 165271735 -1378561 + ORR1D2 LTR MaLR 1 370 0 5 1845 360 318 11 166 chrX 165271748 165271929 -1378367 - RSINE1 SINE B4 -6 159 7 5 1845 423 0 0 0 chrX 165271958 165272005 -1378291 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1845 1199 261 8 23 chrX 165272007 165272077 -1378219 - B4A SINE B4 -23 269 202 5 1845 3110 36 23 13 chrX 165272077 165272469 -1377827 - MTA_Mm LTR MaLR 0 396 1 5 1845 1199 261 8 23 chrX 165272469 165272664 -1377632 - B4A SINE B4 -91 201 8 5 1845 262 259 0 18 chrX 165272663 165272718 -1377578 - RSINE1 SINE B4 -27 138 85 5 1845 1899 154 6 0 chrX 165272755 165273067 -1377229 - ORR1A2 LTR MaLR -13 314 1 5 1845 363 313 39 87 chrX 165273067 165273281 -1377015 - B4A SINE B4 -82 210 9 5 1845 1455 137 0 4 chrX 165273496 165273723 -1376573 + URR1A DNA MER1_type 1 226 0 5 1845 457 236 77 23 chrX 165274509 165274639 -1375657 - MTD LTR MaLR -2 417 281 5 1845 191 286 43 0 chrX 165275379 165275449 -1374847 - L2a LINE L2 -1 3425 3353 5 1845 1105 83 0 20 chrX 165275801 165275949 -1374347 + B1_Mus2 SINE Alu 3 147 0 5 1845 270 115 0 0 chrX 165275949 165276001 -1374295 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 5 1845 375 371 116 5 chrX 165276312 165276710 -1373586 - Lx8 LINE L1 -146 7327 6886 5 1845 298 352 12 41 chrX 165276870 165277039 -1373257 - Lx8 LINE L1 -199 7274 7111 5 1845 396 0 0 0 chrX 165277065 165277109 -1373187 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1845 231 210 34 68 chrX 165277323 165277471 -1372825 + A-rich Low_complexity Low_complexity 3 145 0 5 1845 422 220 45 9 chrX 165277483 165277593 -1372703 - Lx7 LINE L1 -376 7320 7207 5 1845 197 119 0 23 chrX 165277650 165277693 -1372603 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 5 1845 2793 224 44 10 chrX 165277696 165278282 -1372014 - Lx6 LINE L1 -169 7291 6686 5 1845 2785 188 43 0 chrX 165278277 165278813 -1371483 - L1_Mur3 LINE L1 -222 5658 5100 5 1845 3595 193 54 61 chrX 165278803 165278908 -1371388 - L1_Mur3 LINE L1 -3662 2218 2121 5 1845 1002 75 60 0 chrX 165278908 165279041 -1371255 + B1_Mus1 SINE Alu 1 141 -7 5 1845 192 97 0 0 chrX 165279045 165279076 -1371220 + (TAA)n Simple_repeat Simple_repeat 2 32 0 5 1845 351 0 0 0 chrX 165279076 165279114 -1371182 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1845 3595 193 54 61 chrX 165279114 165279213 -1371083 - L1_Mur3 LINE L1 -3760 2120 2048 5 1845 342 0 0 0 chrX 165279213 165279251 -1371045 + (TCCC)n Simple_repeat Simple_repeat 4 41 0 5 1845 4934 188 110 28 chrX 165279251 165281052 -1369244 - L1_Mur3 LINE L1 -3833 2047 84 5 1845 330 26 0 0 chrX 165281078 165281117 -1369179 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1845 378 151 16 40 chrX 165281226 165281350 -1368946 + (TATG)n Simple_repeat Simple_repeat 4 124 0 5 1845 349 211 40 17 chrX 165281371 165281545 -1368751 + (TATATG)n Simple_repeat Simple_repeat 1 178 0 5 1846 232 258 0 31 chrX 165281802 165281866 -1368430 + CT-rich Low_complexity Low_complexity 3 64 0 5 1846 340 359 8 8 chrX 165282077 165282195 -1368101 - MER20 DNA MER1_type -69 150 33 5 1846 439 211 39 39 chrX 165282752 165282930 -1367366 + CT-rich Low_complexity Low_complexity 3 180 0 5 1846 346 271 16 32 chrX 165282952 165283078 -1367218 + CT-rich Low_complexity Low_complexity 3 126 0 5 1846 242 313 29 48 chrX 165283858 165283962 -1366334 - MIR3 SINE MIR -24 184 83 5 1846 731 256 79 4 chrX 165284573 165284801 -1365495 + Lx6 LINE L1 7190 7434 -26 5 1846 236 286 0 0 chrX 165285018 165285081 -1365215 + Lx8 LINE L1 6929 6991 -482 5 1846 350 355 66 11 chrX 165285111 165285293 -1365003 + Lx8 LINE L1 7057 7248 -225 5 1846 240 270 20 101 chrX 165285304 165285403 -1364893 + Lx8 LINE L1 7371 7461 -12 5 1846 1136 247 8 0 chrX 165285440 165285675 -1364621 - Lx9 LINE L1 -276 7368 7132 5 1846 872 313 48 45 chrX 165285675 165286030 -1364266 - MLT1D LTR MaLR -58 447 92 5 1846 1883 257 12 31 chrX 165286075 165286564 -1363732 + Lx7 LINE L1 6887 7366 -330 5 1846 222 151 32 56 chrX 165286585 165286711 -1363585 + T-rich Low_complexity Low_complexity 1 123 0 5 1846 731 201 0 22 chrX 165286912 165287049 -1363247 - B1_Mus2 SINE Alu -9 138 5 5 1846 229 278 127 40 chrX 165287092 165287242 -1363054 - RSINE1 SINE B4 0 165 3 5 1846 543 288 46 76 chrX 165287277 165287540 -1362756 - Charlie5 DNA MER1_type -12 2612 2358 5 1846 942 96 0 0 chrX 165287577 165287712 -1362584 + (TTTC)n Simple_repeat Simple_repeat 2 136 0 5 1846 764 267 20 30 chrX 165287712 165287913 -1362383 - ID_B1 SINE B4 -11 213 15 5 1846 533 273 81 62 chrX 165287962 165288173 -1362123 - MER20 DNA MER1_type -2 217 3 5 1846 191 315 20 71 chrX 165288241 165288340 -1361956 - L2a LINE L2 -7 3419 3326 5 1846 448 308 14 34 chrX 165289137 165289285 -1361011 + B1F SINE Alu 5 149 0 5 1846 415 375 101 25 chrX 165289305 165289663 -1360633 + LTR16C LTR ERVL 105 489 0 5 1846 1065 276 125 25 chrX 165289900 165290219 -1360077 + ORR1E LTR MaLR 1 351 -8 5 1846 33609 102 19 16 chrX 165290802 165297111 -1353185 - L1Md_F2 LINE L1 -2 6580 250 5 1846 755 191 0 0 chrX 165297817 165297943 -1352353 + B1_Mus2 SINE Alu 1 126 -21 5 1846 21 0 0 0 chrX 165297943 165297964 -1352332 + AT_rich Low_complexity Low_complexity 1 21 0 5 1846 435 288 142 4 chrX 165298169 165298549 -1351747 - L1_Mur3 LINE L1 -750 5547 5087 5 1846 429 229 182 27 chrX 165299018 165299238 -1351058 - Lx9 LINE L1 -7 7637 7384 5 1846 669 164 46 27 chrX 165299248 165299420 -1350876 - B3A SINE B2 -8 185 1 5 1846 387 223 163 62 chrX 165299639 165299768 -1350528 - B1_Mur1 SINE Alu -7 142 1 5 1846 1489 293 68 15 chrX 165300048 165300579 -1349717 - Lx6 LINE L1 -4 7456 6529 5 1846 351 0 0 0 chrX 165300747 165300786 -1349510 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1846 206 229 0 0 chrX 165301317 165301365 -1348931 + GA-rich Low_complexity Low_complexity 1 48 0 5 1846 673 276 160 61 chrX 165301643 165301956 -1348340 - MTE2a LTR MaLR -31 348 5 5 1846 351 0 0 0 chrX 165302216 165302255 -1348041 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1846 22 56 0 0 chrX 165302773 165302809 -1347487 + AT_rich Low_complexity Low_complexity 1 36 0 5 1846 311 276 44 44 chrX 165303133 165303224 -1347072 + MLT1H2 LTR MaLR 87 177 -312 5 1846 668 348 43 39 chrX 165303579 165303860 -1346436 - B4A SINE B4 0 292 11 5 1846 1033 257 62 78 chrX 165305709 165306093 -1344203 + MTEa LTR MaLR 1 378 -1 5 1846 743 289 91 0 chrX 165306561 165306814 -1343482 + LTR16C LTR ERVL 182 457 -32 5 1846 234 0 0 0 chrX 165306929 165306955 -1343341 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1846 319 203 162 0 chrX 165307488 165307562 -1342734 + MTE2b LTR MaLR 231 316 -63 5 1846 1133 35 14 0 chrX 165307562 165307707 -1342589 + (TTTC)n Simple_repeat Simple_repeat 2 148 0 5 1846 617 208 9 0 chrX 165307716 165307822 -1342474 - B1_Mur1 SINE Alu -42 107 1 5 1846 282 219 80 27 chrX 165307822 165307879 -1342417 + MTE2b LTR MaLR 302 362 -17 5 1846 715 285 55 7 chrX 165308196 165308458 -1341838 + L1MA9 LINE L1 5581 5848 -332 5 1846 181 356 41 0 chrX 165309013 165309086 -1341210 + L2c LINE L2 3001 3076 -311 5 1846 797 275 39 0 chrX 165310201 165310408 -1339888 + B3 SINE B2 2 216 0 5 1846 733 289 53 11 chrX 165310535 165310724 -1339572 + B3 SINE B2 20 216 0 5 1846 366 277 12 12 chrX 165310836 165310920 -1339376 + RSINE1 SINE B4 82 165 0 5 1846 564 42 0 0 chrX 165310931 165311002 -1339294 + (GA)n Simple_repeat Simple_repeat 2 72 0 5 1846 230 341 0 12 chrX 165311150 165311236 -1339060 + Tigger5 DNA MER2_type 2291 2375 -31 5 1846 389 316 22 28 chrX 165311543 165311725 -1338571 - L1MC1 LINE L1 -199 6134 5954 5 1846 603 256 15 23 chrX 165311979 165312129 -1338167 - B1_Mur1 SINE Alu -7 142 1 6 1846 749 11 11 0 chrX 165312484 165312574 -1337722 + (TC)n Simple_repeat Simple_repeat 1 91 0 6 1846 315 0 0 0 chrX 165312659 165312694 -1337602 + (T)n Simple_repeat Simple_repeat 1 35 0 6 1846 697 256 86 10 chrX 165313399 165313596 -1336700 - B3 SINE B2 0 216 5 6 1846 566 255 144 4 chrX 165313905 165314141 -1336155 - L1MB8 LINE L1 -230 5948 5680 6 1846 3410 219 17 40 chrX 165314151 165315148 -1335148 + Lx7 LINE L1 6341 7276 -184 6 1846 293 330 20 0 chrX 165315219 165315319 -1334977 + Lx7 LINE L1 7197 7298 -398 6 1846 1905 44 343 137 chrX 165315325 165315719 -1334577 - MT2C_Mm LTR ERVL 0 475 1 6 1846 35 24 0 0 chrX 165315918 165315960 -1334336 + AT_rich Low_complexity Low_complexity 1 42 0 6 1846 527 299 6 87 chrX 165316826 165316998 -1333298 - RSINE1 SINE B4 -2 163 6 6 1846 463 278 111 53 chrX 165317213 165317369 -1332927 - L1MA4 LINE L1 -385 5915 5741 6 1846 302 67 22 0 chrX 165317369 165317414 -1332882 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 6 1846 654 141 0 160 chrX 165317416 165317585 -1332711 - B1_Mur3 SINE Alu -7 142 1 6 1846 463 278 111 53 chrX 165317585 165317615 -1332681 - L1MA4 LINE L1 -560 5740 5715 6 1846 223 197 42 14 chrX 165317615 165317687 -1332609 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 6 1846 355 302 67 1 chrX 165317709 165317906 -1332390 - L1MA4 LINE L1 -238 5642 5425 6 1846 369 0 0 0 chrX 165318364 165318405 -1331891 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1846 321 255 30 7 chrX 165318765 165318911 -1331385 - L1MA4 LINE L1 -1982 3895 3753 6 1846 431 262 24 21 chrX 165319533 165319703 -1330593 + B3 SINE B2 2 216 0 6 1846 2981 305 139 25 chrX 165320045 165321414 -1328882 - MTEa-int LTR MaLR -52 1528 3 6 1846 353 330 54 55 chrX 165321418 165321753 -1328543 - MTEa LTR MaLR -10 369 28 6 1846 264 122 0 0 chrX 165322630 165322671 -1327625 + (T)n Simple_repeat Simple_repeat 1 41 0 6 1846 1096 95 0 0 chrX 165322675 165322822 -1327474 - B1_Mus1 SINE Alu -1 147 1 6 1846 273 310 99 58 chrX 165322917 165323160 -1327136 - L1MB8 LINE L1 -170 6008 5756 6 1846 235 160 20 0 chrX 165323194 165323244 -1327052 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 6 1846 232 189 19 0 chrX 165323277 165323330 -1326966 + L1M5 LINE L1 5404 5457 -737 6 1846 681 195 24 31 chrX 165324661 165324676 -1325620 + B1F SINE Alu 9 21 -128 6 1846 2856 89 14 2 chrX 165324676 165325092 -1325204 + BGLII LTR ERVK 1 421 0 6 1846 681 195 24 31 chrX 165325092 165325203 -1325093 + B1F SINE Alu 22 134 -15 6 1846 711 328 11 27 chrX 165325409 165325672 -1324624 + MLT1D LTR MaLR 163 421 -84 6 1846 264 342 0 25 chrX 165325718 165325799 -1324497 + LTR16C LTR ERVL 411 489 0 6 1846 387 354 72 15 chrX 165326564 165326759 -1323537 - MLT1J1-int LTR MaLR -955 432 227 6 1846 269 270 0 152 chrX 165327149 165327267 -1323029 - MLT1J1 LTR MaLR -274 170 71 6 1846 285 320 0 0 chrX 165327484 165327562 -1322734 - ID4 SINE ID -1 82 5 6 1846 305 303 51 43 chrX 165327580 165327718 -1322578 - B1F SINE Alu -8 141 3 6 1846 692 265 122 9 chrX 165328070 165328291 -1322005 - MER2 DNA MER2_type 0 345 100 6 1846 896 302 19 54 chrX 165328332 165328591 -1321705 - B4A SINE B4 0 292 43 6 1846 631 320 107 18 chrX 165328814 165329080 -1321216 - MLT1E2 LTR MaLR -180 447 144 6 1846 316 311 11 22 chrX 165329376 165329468 -1320828 - MLT1A0 LTR MaLR -4 361 271 6 1846 279 157 0 0 chrX 165329954 165330005 -1320291 + (TCCA)n Simple_repeat Simple_repeat 3 53 0 6 1846 344 282 0 93 chrX 165330090 165330176 -1320120 - B1F1 SINE Alu -57 92 15 6 1846 27 0 0 0 chrX 165330288 165330315 -1319981 + AT_rich Low_complexity Low_complexity 1 27 0 6 1846 1960 214 113 60 chrX 165331074 165331607 -1318689 + RLTR20B1 LTR ERVK 3 563 0 6 1846 1049 256 95 15 chrX 165331868 165332130 -1318166 - MTE2b LTR MaLR -62 317 35 6 1846 1321 164 18 18 chrX 165332130 165332354 -1317942 + URR1B DNA MER1_type 1 224 -1 6 1846 468 0 0 0 chrX 165332529 165332581 -1317715 + (GA)n Simple_repeat Simple_repeat 1 52 0 6 1846 315 308 84 84 chrX 165332619 165332832 -1317464 + MER20 DNA MER1_type 1 213 -6 6 1846 21 0 0 0 chrX 165333044 165333065 -1317231 + AT_rich Low_complexity Low_complexity 1 21 0 6 1846 213 65 0 0 chrX 165333323 165333354 -1316942 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1846 480 59 0 0 chrX 165333354 165333422 -1316874 + (TG)n Simple_repeat Simple_repeat 1 68 0 6 1846 2693 74 3 19 chrX 165333634 165334007 -1316289 + L1Md_F2 LINE L1 6216 6582 0 6 1846 276 238 66 47 chrX 165334294 165334400 -1315896 - RLTR25A LTR ERVK -471 632 525 6 1846 654 159 97 0 chrX 165334324 165334437 -1315859 - B1F1 SINE Alu -22 127 4 6 1846 1407 210 139 12 chrX 165334975 165335307 -1314989 + ORR1D1 LTR MaLR 1 374 0 6 1846 2793 105 4 74 chrX 165335530 165335992 -1314304 + RLTR23 LTR ERV1 1 430 0 6 1846 299 294 38 82 chrX 165336037 165336185 -1314111 - MTEb LTR MaLR 0 379 235 6 1846 369 0 0 0 chrX 165336185 165336226 -1314070 + (GA)n Simple_repeat Simple_repeat 1 41 0 6 1846 889 252 109 34 chrX 165336670 165336937 -1313359 - MTE2b LTR MaLR -87 292 6 6 1846 22 80 0 0 chrX 165337776 165337826 -1312470 + AT_rich Low_complexity Low_complexity 1 50 0 6 1846 311 0 0 25 chrX 165338420 165338460 -1311836 + (CAAAA)n Simple_repeat Simple_repeat 4 42 0 6 1846 22 0 0 0 chrX 165338767 165338789 -1311507 + AT_rich Low_complexity Low_complexity 1 22 0 6 1846 245 109 22 0 chrX 165338934 165338980 -1311316 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1846 1702 241 8 46 chrX 165338980 165339455 -1310841 - Lx9 LINE L1 -159 7485 7029 6 1846 1714 176 29 34 chrX 165339691 165340103 -1310193 + RMER17C LTR ERVK 1 410 0 6 1846 394 267 9 38 chrX 165340122 165340227 -1310069 - MER58A DNA MER1_type -96 128 27 6 1846 333 254 0 0 chrX 165340257 165340328 -1309968 + MIRm SINE MIR 206 276 0 6 1846 213 39 0 0 chrX 165340861 165340887 -1309409 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 6 1846 234 353 11 34 chrX 165343436 165343524 -1306772 - L2c LINE L2 -50 3337 3252 6 1846 251 317 0 0 chrX 165343873 165343955 -1306341 + (ATG)n Simple_repeat Simple_repeat 2 83 0 6 1846 21 0 0 0 chrX 165343986 165344007 -1306289 + AT_rich Low_complexity Low_complexity 1 21 0 6 1846 928 202 48 33 chrX 165344007 165344217 -1306079 - B3 SINE B2 -3 213 1 6 1846 244 341 30 53 chrX 165344521 165344654 -1305642 + L2a LINE L2 3022 3151 -275 6 1846 626 265 34 7 chrX 165345918 165346066 -1304230 + ID_B1 SINE B4 5 156 -68 6 1846 231 252 56 75 chrX 165346018 165346125 -1304171 + PB1 SINE Alu 23 127 0 6 1846 520 281 38 30 chrX 165346347 165346611 -1303685 - L1MA8 LINE L1 -68 6223 5958 6 1846 405 0 0 0 chrX 165346632 165346677 -1303619 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 1846 416 237 180 63 chrX 165347351 165347590 -1302706 - L1MA8 LINE L1 -561 5739 5473 6 1846 481 280 133 32 chrX 165347604 165347792 -1302504 - MLT1C LTR MaLR -207 260 54 6 1846 410 258 64 54 chrX 165348796 165348962 -1301334 - B3 SINE B2 -5 190 37 6 1846 500 240 47 16 chrX 165349037 165349164 -1301132 - B1F SINE Alu -1 148 18 6 1846 436 226 148 0 chrX 165349179 165349294 -1301002 - RMER30 DNA MER1_type -53 149 18 6 1846 207 0 0 0 chrX 165349693 165349716 -1300580 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 1846 207 88 0 0 chrX 165349711 165349745 -1300551 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 6 1846 407 267 20 10 chrX 165349749 165349851 -1300445 + MER5A1 DNA MER1_type 61 163 -3 6 1846 685 296 26 4 chrX 165349942 165350169 -1300127 + Lx8 LINE L1 6883 7114 -359 6 1846 771 69 0 0 chrX 165350223 165350325 -1299971 + (GGAA)n Simple_repeat Simple_repeat 2 103 0 6 1846 1128 243 55 19 chrX 165350496 165350911 -1299385 + L1MA9 LINE L1 5803 6232 -80 6 1846 414 0 0 0 chrX 165350941 165350987 -1299309 + (TCTA)n Simple_repeat Simple_repeat 2 47 0 6 1846 315 234 97 117 chrX 165351114 165351259 -1299037 + MER5B DNA MER1_type 8 149 -40 6 1846 339 302 132 35 chrX 165351847 165351991 -1298305 + RSINE1 SINE B4 2 159 -6 6 1846 180 194 0 0 chrX 165352136 165352172 -1298124 + MER5A DNA MER1_type 151 186 -3 6 1846 315 253 13 13 chrX 165352871 165352947 -1297349 - ID4_ SINE ID -7 76 1 6 1846 371 132 15 0 chrX 165353594 165353662 -1296634 + (GAAA)n Simple_repeat Simple_repeat 4 72 0 6 1846 360 0 0 0 chrX 165353934 165353974 -1296322 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1846 1294 153 9 13 chrX 165354049 165354274 -1296022 - URR1A DNA MER1_type -2 224 1 6 1846 1264 285 32 21 chrX 165355208 165355550 -1294746 + ORR1E LTR MaLR 1 403 -16 6 1846 216 0 0 0 chrX 165355550 165355574 -1294722 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1846 255 31 0 0 chrX 165355597 165355629 -1294667 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 1846 301 221 12 94 chrX 165355831 165355916 -1294380 + MT2B2 LTR ERVL 160 237 -347 6 1846 480 216 11 0 chrX 165355842 165355930 -1294366 + PB1D10 SINE Alu 6 94 -23 6 1846 246 293 50 44 chrX 165355865 165356047 -1294249 - RMER17A LTR ERVK -252 499 317 6 1846 2713 73 55 53 chrX 165357117 165357534 -1292762 + BGLII LTR ERVK 4 421 0 6 1846 481 211 128 38 chrX 165357856 165357898 -1292398 - RLTR20B2 LTR ERVK -48 486 445 6 1846 414 0 0 0 chrX 165357898 165357944 -1292352 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1846 912 204 137 59 chrX 165357944 165358307 -1291989 - RLTR20B2 LTR ERVK -90 444 21 6 1846 309 319 20 99 chrX 165358361 165358563 -1291733 - MIRc SINE MIR -14 254 69 6 1846 1189 275 82 74 chrX 165358693 165359204 -1291092 + MER74A LTR ERVL 44 558 0 6 1846 243 114 0 0 chrX 165359501 165359545 -1290751 + (CAA)n Simple_repeat Simple_repeat 2 45 0 6 1846 744 294 10 0 chrX 165359556 165359760 -1290536 - ID_B1 SINE B4 -18 206 1 6 1846 261 98 0 0 chrX 165360009 165360050 -1290246 + (T)n Simple_repeat Simple_repeat 1 41 0 7 1846 35949 34 12 12 chrX 165360066 165361715 -1288581 - L1Md_T LINE L1 0 6582 4914 7 1846 228 183 46 77 chrX 165361715 165361780 -1288516 + RMER20A LTR ERVK 186 248 -268 7 1846 35949 34 12 12 chrX 165361780 165365478 -1284818 - L1Md_T LINE L1 0 4913 1170 7 1846 5220 159 24 30 chrX 165365484 165366598 -1283698 - L1Md_T LINE L1 -5411 1205 99 7 1846 366 288 144 35 chrX 165367573 165367746 -1282550 - ORR1E LTR MaLR -167 192 1 7 1846 30 0 0 0 chrX 165367834 165367864 -1282432 + AT_rich Low_complexity Low_complexity 1 30 0 7 1846 619 259 28 34 chrX 165367912 165368088 -1282208 - RMER15 LTR ERVL 0 575 401 7 1846 321 274 30 40 chrX 165368094 165368193 -1282103 - RMER15 LTR ERVL -131 444 347 7 1846 252 0 0 0 chrX 165369085 165369113 -1281183 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 1846 285 196 191 76 chrX 165369113 165369218 -1281078 - PB1 SINE Alu -9 118 2 7 1846 296 340 39 26 chrX 165369627 165369781 -1280515 - MLT1J LTR MaLR -337 175 20 7 1846 3551 150 85 2 chrX 165369931 165370777 -1279519 - Lx5 LINE L1 -731 6319 5396 7 1846 3900 182 27 1 chrX 165370777 165371472 -1278824 + Lx5 LINE L1 6335 7047 -3 7 1846 250 351 7 56 chrX 165371616 165371758 -1278538 - Tigger12 DNA MER2_type -1290 669 535 7 1846 445 352 58 35 chrX 165371882 165372141 -1278155 - LTR16C LTR ERVL -86 403 139 7 1846 615 27 0 0 chrX 165372164 165372237 -1278059 + (TTTTG)n Simple_repeat Simple_repeat 2 74 0 7 1846 1071 59 22 0 chrX 165372237 165372373 -1277923 - B1_Mus1 SINE Alu -9 139 1 7 1846 216 0 0 0 chrX 165372422 165372446 -1277850 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 1846 330 250 125 0 chrX 165373813 165373893 -1276403 - 5S rRNA rRNA -31 90 1 7 1846 728 295 43 12 chrX 165374008 165374265 -1276031 - MER58B DNA MER1_type 0 341 77 7 1846 342 0 0 0 chrX 165374265 165374303 -1275993 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1846 429 268 25 8 chrX 165374518 165374643 -1275653 + B1F1 SINE Alu 2 127 -20 7 1846 256 246 0 68 chrX 165375129 165375203 -1275093 + RMER12 LTR ERVK 747 815 -507 7 1846 2041 142 9 9 chrX 165375263 165375591 -1274705 - Lx4B LINE L1 0 7058 6731 7 1846 356 311 66 26 chrX 165375706 165375858 -1274438 - RSINE1 SINE B4 -4 161 4 7 1846 540 45 0 0 chrX 165376745 165376812 -1273484 + (TC)n Simple_repeat Simple_repeat 2 68 0 7 1846 480 311 150 16 chrX 165376847 165377040 -1273256 - B4A SINE B4 -8 284 66 7 1846 282 156 0 0 chrX 165377067 165377131 -1273165 + (CCTA)n Simple_repeat Simple_repeat 2 65 0 7 1846 181 250 208 0 chrX 165377362 165377410 -1272886 + L4 LINE RTE 1072 1129 -900 7 1846 224 245 61 0 chrX 165377638 165377687 -1272609 - MIRb SINE MIR -8 260 209 7 1846 239 250 68 14 chrX 165377747 165377820 -1272476 - RMER3D2 LTR ERVK -157 433 357 7 1846 2050 171 89 18 chrX 165378179 165378572 -1271724 - MTC LTR MaLR 0 421 1 7 1846 453 19 0 0 chrX 165378911 165378965 -1271331 + (CA)n Simple_repeat Simple_repeat 2 55 0 7 1846 294 281 70 40 chrX 165380814 165380914 -1269382 - MER20 DNA MER1_type -17 202 100 7 1846 502 287 156 40 chrX 165381177 165381453 -1268843 + MLT1H LTR MaLR 30 337 -212 7 1846 380 324 80 22 chrX 165381776 165382000 -1268296 + MIR SINE MIR 25 261 -1 7 1846 595 219 99 6 chrX 165382123 165382284 -1268012 + L1MB3 LINE L1 5989 6164 -19 7 1846 1063 159 119 0 chrX 165382297 165382498 -1267798 + URR1A DNA MER1_type 2 226 0 7 1846 1176 62 0 0 chrX 165383923 165384069 -1266227 + B1_Mm SINE Alu 2 147 0 7 1846 270 81 0 0 chrX 165384069 165384106 -1266190 + (A)n Simple_repeat Simple_repeat 1 37 0 7 1846 579 306 35 0 chrX 165384142 165384315 -1265981 + MER20 DNA MER1_type 9 187 -32 7 1846 1159 135 56 25 chrX 165384495 165384693 -1265603 - URR1A DNA MER1_type -22 204 1 7 1846 3291 109 26 14 chrX 165385783 165386284 -1264012 - Lx3A LINE L1 -11 6970 6464 7 1846 1191 56 0 0 chrX 165386942 165387086 -1263210 + B1_Mus1 SINE Alu 5 148 0 7 1846 201 74 0 0 chrX 165387689 165387716 -1262580 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1846 488 216 54 0 chrX 165388005 165388116 -1262180 + B1F SINE Alu 1 117 -32 7 1846 440 248 85 8 chrX 165388116 165388135 -1262161 + ID_B1 SINE B4 82 221 -3 7 1846 423 38 0 0 chrX 165388144 165388197 -1262099 + (CTAAA)n Simple_repeat Simple_repeat 4 56 0 7 1846 308 247 126 54 chrX 165388619 165388786 -1261510 - MER53 DNA hAT -14 179 1 7 1846 376 310 106 53 chrX 165389284 165389492 -1260804 + MIR SINE MIR 14 232 -30 7 1846 181 291 55 0 chrX 165389778 165389833 -1260463 - MIRb SINE MIR -112 156 99 7 1846 6727 43 0 2 chrX 165390070 165390888 -1259408 + L1Md_T LINE L1 5766 6581 -1 7 1846 414 0 0 0 chrX 165391260 165391306 -1258990 + (TC)n Simple_repeat Simple_repeat 2 47 0 7 1846 279 0 0 0 chrX 165391306 165391336 -1258960 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 1846 4171 154 13 18 chrX 165391501 165392261 -1258035 + RMER6A LTR ERVK 1 756 0 7 1846 213 371 30 20 chrX 165392833 165392877 -1257419 - B3A SINE B2 -98 100 1 7 1846 322 236 0 0 chrX 165392877 165392932 -1257364 - RSINE1 SINE B4 -109 56 2 7 1846 296 347 58 6 chrX 165392992 165393163 -1257133 - L1M5 LINE L1 -387 5786 5607 7 1846 513 269 77 12 chrX 165393284 165393453 -1256843 + MER58A DNA MER1_type 45 224 0 7 1846 354 259 3 0 chrX 165393700 165393784 -1256512 - ID4 SINE ID -66 86 1 7 1846 488 318 124 32 chrX 165393926 165394144 -1256152 - Tigger5 DNA MER2_type -2167 239 2 7 1846 1171 55 7 0 chrX 165394459 165394605 -1255691 - B1_Mus1 SINE Alu 0 148 2 7 1846 3367 28 8 0 chrX 165395128 165395521 -1254775 - MTA_Mm LTR MaLR 0 396 1 7 1846 7208 86 45 24 chrX 165395521 165396195 -1254101 - MTA_Mm-int LTR MaLR 0 1258 508 7 1846 1472 154 11 84 chrX 165396195 165396542 -1253754 - RLTRETN_Mm LTR ERVK 0 322 1 7 1846 7208 59 9 8 chrX 165396542 165397050 -1253246 - MTA_Mm-int LTR MaLR -591 507 1 7 1846 2930 35 3 0 chrX 165397050 165397395 -1252901 - MTA_Mm LTR MaLR 0 346 1 7 1846 664 271 67 62 chrX 165398042 165398235 -1252061 + B3 SINE B2 3 196 -20 7 1846 210 71 0 0 chrX 165398870 165398898 -1251398 + (TTG)n Simple_repeat Simple_repeat 2 29 0 7 1846 414 246 254 0 chrX 165398900 165399014 -1251282 - B1_Mus1 SINE Alu -4 144 2 7 1846 507 333 87 40 chrX 165399132 165399454 -1250842 + MER2 DNA MER2_type 9 345 0 7 1846 2053 166 96 26 chrX 165399868 165400483 -1249813 - RMER6A LTR ERVK -10 746 34 7 1846 647 65 22 0 chrX 165400562 165400654 -1249642 + (GAAA)n Simple_repeat Simple_repeat 3 96 0 7 1846 1055 319 5 53 chrX 165400662 165401036 -1249260 - MLT1A LTR MaLR -13 361 6 7 1846 389 340 97 5 chrX 165401136 165401322 -1248974 + Helitron3Na_Mam RC Helitron 28 230 -256 7 1846 17966 83 17 29 chrX 165401422 165404732 -1245564 + L1Md_F LINE L1 394 3662 -2221 7 1846 628 102 8 17 chrX 165404732 165404851 -1245445 + L1Md_F2 LINE L1 6465 6582 0 7 1846 25 0 0 0 chrX 165404863 165404888 -1245408 + AT_rich Low_complexity Low_complexity 1 25 0 7 1846 755 343 71 98 chrX 165405585 165406137 -1244159 - MLT1F2 LTR MaLR -8 552 16 7 1846 318 288 25 0 chrX 165406971 165407051 -1243245 + ID4_ SINE ID 2 83 0 7 1846 513 71 0 0 chrX 165407092 165407162 -1243134 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 7 1846 698 210 28 14 chrX 165407204 165407349 -1242947 + B1_Mur2 SINE Alu 2 148 -1 7 1846 192 200 0 0 chrX 165407350 165407410 -1242886 + A-rich Low_complexity Low_complexity 1 60 0 7 1846 421 325 19 92 chrX 165408140 165408347 -1241949 + MER20 DNA MER1_type 1 192 -27 7 1846 258 329 25 12 chrX 165408367 165408447 -1241849 - Lx8 LINE L1 -162 7311 7231 7 1846 759 275 19 0 chrX 165409109 165409316 -1240980 - B3 SINE B2 -5 211 1 7 1846 215 0 0 62 chrX 165409854 165409886 -1240410 + (TTTTTG)n Simple_repeat Simple_repeat 6 35 0 7 1846 1095 89 7 0 chrX 165409886 165410032 -1240264 - B1_Mus1 SINE Alu 0 148 2 7 1846 513 378 20 5 chrX 165411158 165411355 -1238941 + MER58A DNA MER1_type 4 203 -21 7 1846 657 174 35 0 chrX 165411930 165412045 -1238251 - B1_Mus1 SINE Alu -3 145 27 7 1846 306 405 0 0 chrX 165412288 165412399 -1237897 - PB1D7 SINE Alu -9 111 1 7 1846 324 0 0 0 chrX 165412481 165412517 -1237779 + (TTA)n Simple_repeat Simple_repeat 1 36 0 7 1846 1127 69 0 0 chrX 165412530 165412674 -1237622 + B1_Mus2 SINE Alu 2 145 -2 7 1846 209 57 0 28 chrX 165412674 165412710 -1237586 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 7 1847 372 43 0 0 chrX 165413186 165413232 -1237064 + (TC)n Simple_repeat Simple_repeat 1 46 0 7 1847 257 306 70 33 chrX 165414334 165414467 -1235829 + MIR SINE MIR 45 176 -86 7 1847 483 264 28 0 chrX 165414658 165414764 -1235532 - B1F SINE Alu -5 144 36 7 1847 1331 189 155 18 chrX 165415247 165415576 -1234720 - ORR1D1 LTR MaLR 0 374 1 7 1847 433 255 54 30 chrX 165415616 165415782 -1234514 + MER53 DNA hAT 20 189 -4 7 1847 923 228 5 42 chrX 165416346 165416561 -1233735 - B3 SINE B2 -6 210 4 7 1847 375 41 0 0 chrX 165416567 165416616 -1233680 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1847 463 338 59 0 chrX 165416621 165416757 -1233539 - B3A SINE B2 -54 144 1 7 1847 485 308 0 0 chrX 165416820 165416937 -1233359 - PB1D10 SINE Alu 0 117 1 7 1847 303 313 12 0 chrX 165417315 165417398 -1232898 + (TG)n Simple_repeat Simple_repeat 1 84 0 7 1847 819 297 29 21 chrX 165417405 165417684 -1232612 - B4A SINE B4 -11 281 1 7 1847 369 206 39 177 chrX 165417748 165417878 -1232418 + MTE2a LTR MaLR 262 373 -6 7 1847 342 255 2 30 chrX 165417885 165418017 -1232279 - L1M1 LINE L1 -438 5751 5623 8 1847 253 269 0 13 chrX 165418069 165418148 -1232148 + MIR SINE MIR 183 260 -2 7 1847 615 297 44 5 chrX 165420115 165420318 -1229978 - L1ME3 LINE L1 -47 6115 5905 8 1847 360 0 0 0 chrX 165420323 165420363 -1229933 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 8 1847 1713 157 49 108 chrX 165420622 165420847 -1229449 - ORR1C2 LTR MaLR 0 384 172 8 1847 221 53 53 0 chrX 165420847 165420885 -1229411 + (CAGAGA)n Simple_repeat Simple_repeat 4 43 0 8 1847 1713 157 49 108 chrX 165420885 165421067 -1229229 - ORR1C2 LTR MaLR -213 171 1 8 1847 6173 95 20 5 chrX 165421201 165422797 -1227499 - L1VL4 LINE L1 -1894 1665 49 8 1847 222 116 0 85 chrX 165422797 165422844 -1227452 - B2_Mm2 SINE B2 -152 43 1 8 1847 430 308 40 66 chrX 165422944 165422965 -1227331 - B2_Mm2 SINE B2 -2 193 173 8 1847 345 102 0 0 chrX 165422965 165423024 -1227272 + (TG)n Simple_repeat Simple_repeat 1 59 0 8 1847 676 275 19 13 chrX 165423024 165423200 -1227096 - B3A SINE B2 -23 172 1 8 1847 211 292 91 65 chrX 165424233 165424310 -1225986 + PB1D7 SINE Alu 13 91 -29 8 1847 401 261 41 50 chrX 165424249 165424370 -1225926 + ID_B1 SINE B4 105 224 0 8 1847 241 207 17 33 chrX 165425009 165425069 -1225227 + (TCTCTG)n Simple_repeat Simple_repeat 4 62 0 8 1847 294 138 0 0 chrX 165425096 165425154 -1225142 + (T)n Simple_repeat Simple_repeat 1 58 0 8 1847 1278 27 0 0 chrX 165425154 165425301 -1224995 - B1_Mm SINE Alu 0 147 1 8 1847 433 388 68 12 chrX 165425302 165425550 -1224746 - MLT1A0 LTR MaLR -2 465 204 8 1847 449 297 29 14 chrX 165426932 165427072 -1223224 - MLT1A0 LTR MaLR -213 152 11 8 1847 307 291 50 46 chrX 165427586 165427843 -1222453 - L1ME3A LINE L1 -22 6218 5892 8 1847 229 282 141 43 chrX 165428464 165428627 -1221669 - Lx8 LINE L1 -1 7472 7294 8 1847 330 324 121 7 chrX 165428657 165428797 -1221499 - Lx8 LINE L1 -238 7235 7080 8 1847 249 283 90 45 chrX 165429330 165429441 -1220855 + Charlie5 DNA MER1_type 7 122 -2502 8 1847 232 250 13 13 chrX 165429467 165429544 -1220752 + Charlie5 DNA MER1_type 2272 2348 -276 8 1847 451 206 260 30 chrX 165429579 165429814 -1220482 + Charlie5 DNA MER1_type 2335 2623 -1 8 1847 216 0 0 0 chrX 165430349 165430373 -1219923 + (T)n Simple_repeat Simple_repeat 1 24 0 8 1847 262 311 97 85 chrX 165431020 165431185 -1219111 - MLT1L LTR MaLR -226 384 218 8 1847 448 162 12 48 chrX 165431197 165431281 -1219015 + MTC LTR MaLR 1 81 -340 8 1847 1813 163 35 3 chrX 165431391 165431704 -1218592 + MTC LTR MaLR 73 395 -26 8 1847 1603 238 63 2 chrX 165431894 165432324 -1217972 - Lx7 LINE L1 -1399 6297 5842 8 1847 1172 174 0 0 chrX 165432394 165432595 -1217701 - Lx7 LINE L1 -612 5268 5068 8 1847 1369 313 64 37 chrX 165432778 165433728 -1216568 + L1_Mur3 LINE L1 4905 5880 0 8 1847 471 18 0 0 chrX 165433750 165433806 -1216490 + (TG)n Simple_repeat Simple_repeat 2 57 0 8 1847 333 0 0 0 chrX 165434369 165434406 -1215890 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 1847 414 0 0 0 chrX 165434406 165434451 -1215845 + (TA)n Simple_repeat Simple_repeat 2 47 0 8 1847 225 0 0 0 chrX 165435434 165435459 -1214837 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1847 244 361 5 87 chrX 165435847 165436032 -1214264 - MIR SINE MIR -86 176 7 8 1847 730 355 82 64 chrX 165436158 165436826 -1213470 - MLT1E1A LTR MaLR 0 680 1 8 1847 896 261 84 15 chrX 165437040 165437433 -1212863 - L1M2 LINE L1 -1413 4730 4311 8 1847 1081 295 100 52 chrX 165437470 165438226 -1212070 + L1M2 LINE L1 4803 5608 -689 8 1847 253 322 0 0 chrX 165438235 165438325 -1211971 + L1M2 LINE L1 5819 5908 -392 8 1847 22 0 0 0 chrX 165438351 165438373 -1211923 + AT_rich Low_complexity Low_complexity 1 22 0 8 1847 650 280 22 33 chrX 165438837 165439018 -1211278 + B3A SINE B2 2 180 -18 8 1847 261 345 77 34 chrX 165439261 165439378 -1210918 + Tigger1 DNA MER2_type 3 124 -2294 8 1847 489 17 0 0 chrX 165439393 165439451 -1210845 + (TTTC)n Simple_repeat Simple_repeat 4 61 0 8 1847 467 330 20 5 chrX 165439453 165439651 -1210645 + Tigger1 DNA MER2_type 2217 2417 -1 8 1847 480 366 17 45 chrX 165439671 165439960 -1210336 + L2a LINE L2 3141 3421 -5 8 1847 265 306 65 32 chrX 165439987 165440109 -1210187 - MIRb SINE MIR -56 206 79 8 1847 367 314 42 71 chrX 165440564 165440732 -1209564 - RSINE1 SINE B4 0 165 3 8 1847 409 323 106 28 chrX 165440865 165441120 -1209176 - LTR16E1 LTR ERVL -1 537 263 8 1847 789 262 104 22 chrX 165441205 165441550 -1208746 + LTR40b LTR ERVL 101 460 -5 8 1847 425 339 35 25 chrX 165446691 165446888 -1203408 + MER20 DNA MER1_type 16 214 -5 8 1847 483 63 0 0 chrX 165449650 165449713 -1200583 + (CA)n Simple_repeat Simple_repeat 2 64 0 8 1847 570 330 47 0 chrX 165449762 165449953 -1200343 - MER58A DNA MER1_type 0 224 25 8 1847 286 280 93 0 chrX 165449962 165450037 -1200259 - MER58A DNA MER1_type -117 107 26 8 1847 191 114 0 28 chrX 165450850 165450886 -1199410 + (TCTCCC)n Simple_repeat Simple_repeat 6 40 0 8 1847 660 273 56 51 chrX 165451546 165451743 -1198553 - MER20 DNA MER1_type 0 219 22 8 1847 1115 320 9 51 chrX 165453268 165453444 -1196852 - L1MA4 LINE L1 -374 5926 5766 8 1847 441 0 0 0 chrX 165453444 165453493 -1196803 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 1847 1115 320 9 51 chrX 165453493 165453886 -1196410 - L1MA4 LINE L1 -535 5765 5381 8 1847 715 207 207 0 chrX 165453981 165454155 -1196141 - B3 SINE B2 -5 211 2 8 1847 1569 194 62 0 chrX 165454189 165454477 -1195819 + MTC LTR MaLR 116 421 0 8 1847 22 35 0 0 chrX 165454535 165454564 -1195732 + AT_rich Low_complexity Low_complexity 1 29 0 8 1847 496 329 39 0 chrX 165454638 165454793 -1195503 - Lx8 LINE L1 -121 7352 7192 8 1847 322 350 12 6 chrX 165455568 165455732 -1194564 + L1M5 LINE L1 5536 5700 -473 8 1847 280 241 60 8 chrX 165457110 165457244 -1193052 + (TA)n Simple_repeat Simple_repeat 2 142 0 8 1847 293 163 44 7 chrX 165457276 165457412 -1192884 + (TA)n Simple_repeat Simple_repeat 1 141 0 8 1847 339 192 71 12 chrX 165457433 165457602 -1192694 + (TA)n Simple_repeat Simple_repeat 1 179 0 8 1847 186 43 0 0 chrX 165457608 165457631 -1192665 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 1847 3096 51 2 20 chrX 165457667 165458067 -1192229 - L1_Mus2 LINE L1 0 6566 6174 8 1847 540 297 92 25 chrX 165460212 165460450 -1189846 - MER58B DNA MER1_type -3 338 85 8 1847 183 314 0 19 chrX 165460647 165460699 -1189597 - L2c LINE L2 -7 3380 3330 8 1847 475 345 32 37 chrX 165461253 165461440 -1188856 - Tigger5 DNA MER2_type -2161 245 60 8 1847 1385 195 88 28 chrX 165461443 165461589 -1188707 - Lx9 LINE L1 -8 7636 7468 8 1847 369 0 0 0 chrX 165461589 165461630 -1188666 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 1847 1385 195 88 28 chrX 165461630 165461836 -1188460 - Lx9 LINE L1 -177 7467 7263 8 1847 262 257 0 114 chrX 165462054 165462133 -1188163 + ID4_ SINE ID 3 72 -11 8 1847 1049 295 10 17 chrX 165462697 165462987 -1187309 + B4A SINE B4 1 288 -4 8 1847 260 120 0 20 chrX 165463007 165463058 -1187238 + (TA)n Simple_repeat Simple_repeat 2 51 0 8 1847 484 355 59 36 chrX 165463181 165463485 -1186811 + LTR16A1 LTR ERVL 146 456 0 8 1847 774 298 87 3 chrX 165463933 165464243 -1186053 - L1MB8 LINE L1 -191 5987 5652 8 1847 185 366 77 24 chrX 165464249 165464456 -1185840 - L3 LINE CR1 -177 4312 4095 8 1847 428 321 15 75 chrX 165465497 165465696 -1184600 - MER20 DNA MER1_type -1 218 32 8 1847 560 330 42 32 chrX 165466421 165466637 -1183659 - MER20 DNA MER1_type -1 218 1 8 1847 24 0 0 0 chrX 165467091 165467115 -1183181 + AT_rich Low_complexity Low_complexity 1 24 0 8 1847 299 286 0 12 chrX 165467176 165467294 -1183002 + CT-rich Low_complexity Low_complexity 1 116 0 8 1847 1201 170 18 9 chrX 165467326 165467552 -1182744 + Lx9 LINE L1 7267 7494 -150 8 1847 39 38 0 0 chrX 165467552 165467605 -1182691 + AT_rich Low_complexity Low_complexity 1 53 0 8 1847 865 70 0 0 chrX 165467616 165467730 -1182566 + B1_Mm SINE Alu 34 147 0 8 1847 708 45 0 0 chrX 165467730 165467818 -1182478 + (GA)n Simple_repeat Simple_repeat 2 89 0 8 1847 287 256 0 0 chrX 165467848 165467938 -1182358 + Lx9 LINE L1 7552 7641 -3 8 1847 728 325 14 9 chrX 165467966 165468180 -1182116 - Lx8 LINE L1 -203 7270 7056 8 1847 455 325 118 49 chrX 165469170 165469536 -1180760 + L1ME3B LINE L1 5552 5942 -220 8 1847 621 254 40 59 chrX 165469572 165469794 -1180502 + MER20 DNA MER1_type 2 219 0 8 1847 598 253 167 21 chrX 165469837 165470023 -1180273 + B3 SINE B2 4 216 0 8 1847 293 262 25 0 chrX 165470689 165470769 -1179527 + ID4_ SINE ID 2 83 0 8 1847 1131 35 7 46 chrX 165471433 165471584 -1178712 - B1_Mm SINE Alu -1 146 2 8 1847 2758 62 8 16 chrX 165471831 165472209 -1178087 + L1_Mus3 LINE L1 6259 6633 -5 8 1847 401 242 88 0 chrX 165472217 165472308 -1177988 - PB1 SINE Alu -11 116 18 8 1847 353 356 27 104 chrX 165472871 165473275 -1177021 - L1ME2 LINE L1 -106 6058 5686 8 1847 231 321 12 0 chrX 165473312 165473393 -1176903 - L1ME2 LINE L1 -537 5636 5555 8 1847 229 250 0 0 chrX 165474515 165474567 -1175729 + C-rich Low_complexity Low_complexity 3 54 0 8 1847 284 273 110 68 chrX 165475407 165475525 -1174771 - L2a LINE L2 -13 3413 3291 8 1847 288 0 0 0 chrX 165475573 165475605 -1174691 + (T)n Simple_repeat Simple_repeat 1 32 0 8 1847 243 0 0 0 chrX 165475837 165475864 -1174432 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 1847 886 114 23 0 chrX 165477818 165477950 -1172346 + B2_Mm2 SINE B2 3 137 -58 8 1847 3289 45 0 5 chrX 165478574 165478979 -1171317 + L1Md_F2 LINE L1 6166 6568 -14 8 1847 191 222 213 40 chrX 165479014 165479089 -1171207 + L2b LINE L2 3279 3366 -9 8 1847 186 43 0 0 chrX 165479627 165479650 -1170646 + (CCAA)n Simple_repeat Simple_repeat 4 26 0 8 1847 262 395 39 8 chrX 165481144 165481274 -1169022 + MER20 DNA MER1_type 28 161 -58 8 1847 195 0 56 28 chrX 165481818 165481854 -1168442 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 8 1847 459 78 0 0 chrX 165483711 165483775 -1166521 + (TA)n Simple_repeat Simple_repeat 1 64 0 8 1847 471 308 124 40 chrX 165484128 165484715 -1165581 + L1_Mur3 LINE L1 5197 5820 -471 8 1847 201 147 0 0 chrX 165485265 165485299 -1164997 + (CCA)n Simple_repeat Simple_repeat 1 34 0 8 1847 1209 162 71 0 chrX 165486139 165486349 -1163947 - URR1B DNA MER1_type 0 225 1 8 1847 283 277 81 89 chrX 165486447 165486570 -1163726 - MLT1H LTR MaLR 0 549 428 8 1847 510 17 0 0 chrX 165486918 165486977 -1163319 + (CA)n Simple_repeat Simple_repeat 2 60 0 8 1847 219 152 0 0 chrX 165486977 165487023 -1163273 + GA-rich Low_complexity Low_complexity 1 46 0 8 1847 212 267 27 0 chrX 165487348 165487423 -1162873 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 9 1847 510 299 7 0 chrX 165487440 165487577 -1162719 - B1F1 SINE Alu -11 138 1 9 1847 978 205 74 10 chrX 165487605 165487807 -1162489 - B3 SINE B2 -1 215 1 9 1847 447 258 120 0 chrX 165487854 165488063 -1162233 - L1MA8 LINE L1 -53 6238 6005 9 1847 251 257 107 13 chrX 165488378 165488453 -1161843 + Cheshire DNA MER1_type 11 92 -2328 9 1847 808 198 71 38 chrX 165488449 165488633 -1161663 - B3 SINE B2 0 216 27 9 1847 6938 69 1 1 chrX 165489212 165490099 -1160197 - L1_Mus2 LINE L1 -2 6564 5678 9 1847 675 189 133 6 chrX 165490141 165490306 -1159990 + Cheshire DNA MER1_type 80 265 -2155 9 1847 208 139 0 0 chrX 165490476 165490512 -1159784 + (T)n Simple_repeat Simple_repeat 1 36 0 9 1847 801 57 0 0 chrX 165490518 165490624 -1159672 - B1_Mus2 SINE Alu 0 147 42 9 1847 276 165 59 84 chrX 165490549 165490668 -1159628 - RLTR25B LTR ERVK -516 512 397 9 1847 393 68 0 33 chrX 165490760 165490821 -1159475 - B1_Mur4 SINE Alu -90 60 2 9 1847 687 279 0 7 chrX 165490902 165491050 -1159246 + B1_Mur1 SINE Alu 2 148 -1 9 1847 204 111 0 0 chrX 165491050 165491086 -1159210 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 9 1847 503 225 72 129 chrX 165491136 165491345 -1158951 + B3A SINE B2 1 197 -1 9 1847 270 0 0 0 chrX 165492802 165492832 -1157464 + (CA)n Simple_repeat Simple_repeat 1 30 0 9 1847 184 79 79 0 chrX 165492837 165492875 -1157421 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 9 1847 1106 52 0 0 chrX 165493030 165493166 -1157130 + B1_Mm SINE Alu 2 137 -10 9 1847 260 27 0 26 chrX 165493166 165493204 -1157092 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 9 1847 273 98 0 0 chrX 165493983 165494024 -1156272 + (TA)n Simple_repeat Simple_repeat 2 42 0 9 1847 384 316 75 47 chrX 165495035 165495383 -1154913 - L1MB8 LINE L1 -2 6176 5808 9 1847 756 234 0 14 chrX 165495401 165495548 -1154748 - ID_B1 SINE B4 -78 146 2 9 1847 775 256 136 13 chrX 165495548 165495865 -1154431 - L1MB8 LINE L1 -374 5804 5449 9 1847 995 221 58 38 chrX 165496824 165497064 -1153232 - Lx5 LINE L1 0 7050 6806 9 1847 1321 283 89 16 chrX 165497845 165498395 -1151901 + L1MB8 LINE L1 5358 5947 -231 9 1847 444 224 37 0 chrX 165498412 165498546 -1151750 + L1MB8 LINE L1 6028 6166 -18 9 1847 324 103 0 0 chrX 165499049 165499107 -1151189 + (TC)n Simple_repeat Simple_repeat 1 58 0 9 1847 225 0 0 0 chrX 165499107 165499132 -1151164 + (TG)n Simple_repeat Simple_repeat 1 25 0 9 1847 293 373 40 0 chrX 165499384 165499534 -1150762 - MIRb SINE MIR -27 241 86 9 1847 256 24 0 47 chrX 165499623 165499666 -1150630 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 9 1847 685 287 62 11 chrX 165501938 165502213 -1148083 - MER33 DNA MER1_type 0 324 36 1 1847 278 253 53 0 chrX 165503883 165503958 -1146338 + MER20 DNA MER1_type 31 109 -110 2 1847 413 173 10 48 chrX 165505116 165505219 -1145077 - L1MB8 LINE L1 -15 6169 6071 3 1847 299 175 16 0 chrX 165505446 165505509 -1144787 - L1MB7 LINE L1 -16 6168 6105 4 1847 514 255 20 46 chrX 165505502 165505699 -1144597 - L1MB8 LINE L1 -308 5870 5679 3 1847 1275 216 42 0 chrX 165505706 165505993 -1144303 - Lx5 LINE L1 0 7050 6752 5 1847 4577 75 0 31 chrX 165505989 165506805 -1143491 - L1_Mus3 LINE L1 -586 6052 5262 6 1847 4189 70 4 4 chrX 165506805 165507352 -1142944 + L1_Mus3 LINE L1 6092 6638 0 6 1847 1659 161 3 77 chrX 165507355 165507678 -1142618 - Lx4B LINE L1 -270 6788 6490 7 1847 398 239 32 90 chrX 165507732 165507888 -1142408 - L1MB8 LINE L1 -538 5640 5494 3 1847 1292 178 4 18 chrX 165509486 165509715 -1140581 - URR1A DNA MER1_type 0 226 1 8 1847 1164 101 0 0 chrX 165510173 165510342 -1139954 + (TCTCC)n Simple_repeat Simple_repeat 2 170 0 9 1847 295 297 152 11 chrX 165510354 165510446 -1139850 - B4A SINE B4 -2 290 186 1 1847 315 161 0 0 chrX 165510634 165510690 -1139606 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1847 21 36 0 0 chrX 165510950 165510978 -1139318 + AT_rich Low_complexity Low_complexity 1 28 0 1 1847 345 234 229 21 chrX 165511927 165512067 -1138229 + MER63A DNA AcHobo 36 204 -6 1 1847 419 224 26 0 chrX 165512596 165512672 -1137624 - ID4_ SINE ID -2 81 4 1 1847 474 352 15 5 chrX 165512702 165512902 -1137394 - Lx8 LINE L1 -1059 6414 6213 1 1847 528 378 52 35 chrX 165512898 165513378 -1136918 + Lx8 LINE L1 6969 7456 -17 1 1847 1872 297 138 70 chrX 165513404 165515069 -1135227 - Lx8 LINE L1 -5 7468 5691 1 1847 321 236 45 0 chrX 165515063 165515152 -1135144 - Lx8 LINE L1 -51 5796 5704 1 1847 1383 265 133 26 chrX 165515265 165516025 -1134271 - L1M2 LINE L1 -1155 4988 4148 1 1847 258 20 80 20 chrX 165516409 165516459 -1133837 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 1 1847 1141 75 0 0 chrX 165516563 165516710 -1133586 - B1_Mm SINE Alu 0 147 1 2 1847 266 319 137 8 chrX 165517444 165517561 -1132735 + MER5A1 DNA MER1_type 1 132 -34 2 1847 788 247 58 34 chrX 165518659 165518864 -1131432 - MER20 DNA MER1_type 0 219 10 2 1847 265 297 127 39 chrX 165518953 165519118 -1131178 - MTEb LTR MaLR -13 366 202 2 1847 200 387 32 0 chrX 165519619 165519712 -1130584 - MER5B DNA MER1_type -14 164 69 2 1847 530 104 0 10 chrX 165520738 165520773 -1129523 + (TC)n Simple_repeat Simple_repeat 2 36 0 2 1847 858 20 0 0 chrX 165520773 165520873 -1129423 + (TTC)n Simple_repeat Simple_repeat 3 102 0 2 1847 530 104 0 10 chrX 165520873 165520934 -1129362 + (TC)n Simple_repeat Simple_repeat 1 61 0 2 1847 697 143 0 73 chrX 165520936 165521072 -1129224 - B1_Mur3 SINE Alu -6 143 18 2 1847 212 86 29 0 chrX 165521073 165521108 -1129188 + (CCA)n Simple_repeat Simple_repeat 2 37 0 2 1847 492 269 8 188 chrX 165521108 165521236 -1129060 - ID_B1 SINE B4 -127 97 1 3 1847 503 263 80 7 chrX 165522156 165522294 -1128002 - RSINE1 SINE B4 -4 161 14 3 1847 247 296 131 15 chrX 165525155 165525292 -1125004 + MER5A DNA MER1_type 18 170 -19 3 1847 275 327 52 80 chrX 165525835 165526048 -1124248 - Lx8 LINE L1 -97 7376 7170 3 1847 21 0 0 0 chrX 165526142 165526163 -1124133 + AT_rich Low_complexity Low_complexity 1 21 0 3 1847 447 101 0 0 chrX 165528292 165528371 -1121925 + (TC)n Simple_repeat Simple_repeat 1 79 0 3 1847 216 0 0 0 chrX 165528371 165528395 -1121901 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 1847 992 279 38 26 chrX 165528412 165528677 -1121619 - B4A SINE B4 -14 278 11 3 1847 4486 218 69 62 chrX 165529670 165530269 -1120027 - Lx6 LINE L1 -2 7458 6879 3 1847 279 0 0 0 chrX 165530269 165530300 -1119996 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1847 234 0 0 0 chrX 165530300 165530325 -1119971 + (GA)n Simple_repeat Simple_repeat 1 26 0 4 1847 4486 218 69 62 chrX 165530325 165530847 -1119449 - Lx6 LINE L1 -582 6878 6330 3 1847 411 38 0 0 chrX 165531802 165531855 -1118441 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1847 386 252 45 38 chrX 165531904 165532036 -1118260 - MLT1E2 LTR MaLR -414 213 81 4 1847 712 143 66 29 chrX 165532092 165532229 -1118067 + URR1B DNA MER1_type 83 224 -1 4 1847 251 357 12 0 chrX 165532233 165532317 -1117979 - MLT1E2 LTR MaLR -420 85 1 4 1847 423 0 0 0 chrX 165533340 165533387 -1116909 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1847 3253 217 54 85 chrX 165534182 165535103 -1115193 - Lx7 LINE L1 0 7696 6804 4 1847 224 329 41 0 chrX 165535253 165535326 -1114970 + ID4 SINE ID 6 81 -2 4 1847 1337 157 10 79 chrX 165536096 165536386 -1113910 - Lx4A LINE L1 -2 7056 6787 4 1847 807 320 98 28 chrX 165536628 165537130 -1113166 + Lx8 LINE L1 6930 7466 -7 4 1847 656 261 116 11 chrX 165537170 165537360 -1112936 + B3 SINE B2 1 210 -6 4 1847 26 0 0 0 chrX 165539397 165539423 -1110873 + AT_rich Low_complexity Low_complexity 1 26 0 5 1847 668 262 41 0 chrX 165539441 165539586 -1110710 - B4A SINE B4 -137 155 5 5 1847 185 290 108 36 chrX 165541136 165541247 -1109049 - MIR SINE MIR -51 211 93 5 1847 497 194 40 67 chrX 165541758 165541907 -1108389 - RMER1B Other Other -3 1063 919 5 1847 1300 166 5 0 chrX 165542485 165542702 -1107594 - RMER1B Other Other -274 792 575 5 1847 23 0 0 0 chrX 165543034 165543057 -1107239 + AT_rich Low_complexity Low_complexity 1 23 0 5 1848 196 271 17 0 chrX 165544165 165544224 -1106072 + L2a LINE L2 3367 3426 0 5 1848 326 85 0 17 chrX 165544935 165544995 -1105301 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 5 1848 23 54 0 0 chrX 165545240 165545277 -1105019 + AT_rich Low_complexity Low_complexity 1 37 0 5 1848 259 286 157 55 chrX 165545277 165545321 -1104975 - B4A SINE B4 -136 156 3 5 1848 621 146 39 10 chrX 165545321 165545425 -1104871 - B3 SINE B2 -107 109 3 5 1848 691 323 90 32 chrX 165546172 165546517 -1103779 + MLT1A LTR MaLR 7 371 -3 6 1848 413 316 82 12 chrX 165546592 165546762 -1103534 - B3A SINE B2 -13 185 4 6 1848 402 282 55 92 chrX 165547111 165547275 -1103021 + RSINE1 SINE B4 8 165 0 6 1848 393 149 0 0 chrX 165547277 165547344 -1102952 + (TA)n Simple_repeat Simple_repeat 1 67 0 6 1848 605 321 12 26 chrX 165548286 165548479 -1101817 + B3A SINE B2 2 182 -34 6 1848 2002 159 42 8 chrX 165549079 165549460 -1100836 - ORR1B1 LTR MaLR 0 394 1 6 1848 588 81 0 0 chrX 165550379 165550466 -1099830 + (TG)n Simple_repeat Simple_repeat 2 88 0 6 1848 427 246 127 0 chrX 165550641 165550783 -1099513 - Tigger16b DNA Tigger -6 331 172 6 1848 230 320 71 10 chrX 165550832 165550930 -1099366 + Tigger16b DNA Tigger 151 254 -83 6 1848 351 136 0 0 chrX 165551443 165551502 -1098794 + (TC)n Simple_repeat Simple_repeat 2 60 0 6 1848 278 259 0 0 chrX 165551676 165551734 -1098562 - ID4 SINE ID -25 58 1 7 1848 180 0 0 0 chrX 165552230 165552250 -1098046 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1848 546 270 94 21 chrX 165553956 165554193 -1096103 - MTEa LTR MaLR 0 379 80 7 1848 5944 236 64 67 chrX 165554226 165555991 -1094305 - Lx6 LINE L1 -110 7350 5592 7 1848 1132 76 0 0 chrX 165556691 165556836 -1093460 + B1_Mm SINE Alu 1 145 -2 7 1848 25 0 0 0 chrX 165557364 165557389 -1092907 + AT_rich Low_complexity Low_complexity 1 25 0 7 1848 243 327 128 19 chrX 165557788 165557944 -1092352 - MER5B DNA MER1_type -1 177 5 7 1848 474 285 69 0 chrX 165557986 165558116 -1092180 + MER20 DNA MER1_type 6 144 -75 7 1848 21 0 0 0 chrX 165558358 165558379 -1091917 + AT_rich Low_complexity Low_complexity 1 21 0 7 1848 211 333 180 16 chrX 165558533 165558661 -1091635 - MER5A DNA MER1_type -40 149 1 7 1848 917 284 60 109 chrX 165559342 165559710 -1090586 - MTEa LTR MaLR 0 379 30 8 1848 249 189 17 85 chrX 165560064 165560123 -1090173 + MLT1A1 LTR MaLR 312 396 -12 8 1848 704 268 82 0 chrX 165560203 165560352 -1089944 + B3 SINE B2 1 153 -63 8 1848 681 123 0 0 chrX 165560352 165560458 -1089838 + (CA)n Simple_repeat Simple_repeat 1 106 0 8 1848 704 268 82 0 chrX 165560458 165560502 -1089794 + B3 SINE B2 154 208 -8 8 1848 1124 212 66 3 chrX 165560505 165560639 -1089657 + Lx9 LINE L1 7288 7422 -222 8 1848 243 0 0 0 chrX 165560639 165560666 -1089630 + (TG)n Simple_repeat Simple_repeat 1 27 0 8 1848 1124 212 66 3 chrX 165560666 165560866 -1089430 + Lx9 LINE L1 7423 7642 -2 8 1848 240 360 90 32 chrX 165562285 165562440 -1087856 - RSINE1 SINE B4 0 165 2 8 1848 346 304 44 82 chrX 165562441 165562624 -1087672 - L1ME1 LINE L1 -68 6111 5936 8 1848 1895 125 15 15 chrX 165562719 165563044 -1087252 + L1_Mus3 LINE L1 5925 6249 -389 8 1848 207 0 0 0 chrX 165564241 165564264 -1086032 + (TATG)n Simple_repeat Simple_repeat 4 26 0 8 1848 203 200 34 68 chrX 165564444 165564503 -1085793 - L3 LINE CR1 -3679 810 754 9 1848 32941 73 3 14 chrX 165566662 165572910 -1077386 - L1Md_F2 LINE L1 0 6585 317 9 1848 4136 141 15 30 chrX 165572910 165574104 -1076192 - L1Md_A LINE L1 -4266 1617 446 9 1848 539 285 73 139 chrX 165574114 165574416 -1075880 - MTEb LTR MaLR -43 336 55 9 1848 495 64 62 26 chrX 165574416 165574529 -1075767 + (TAGA)n Simple_repeat Simple_repeat 4 120 0 9 1848 940 185 292 47 chrX 165574811 165575170 -1075126 - LTRIS5 LTR ERV1 0 447 1 9 1848 1003 201 59 0 chrX 165575170 165575389 -1074907 - MuRRS-int LTR ERV1 0 4690 4459 9 1848 2312 216 38 47 chrX 165575503 165576207 -1074089 - MuRRS-int LTR ERV1 -400 4290 3789 9 1848 4261 199 48 93 chrX 165576346 165576719 -1073577 - MuRRS-int LTR ERV1 -2241 2449 2063 9 1848 195 69 0 0 chrX 165576719 165576748 -1073548 + (TTG)n Simple_repeat Simple_repeat 1 29 0 9 1848 4261 239 86 68 chrX 165576748 165578760 -1071536 - MuRRS-int LTR ERV1 -2628 2062 12 9 1848 944 179 45 63 chrX 165578946 165579244 -1071052 - LTRIS5 LTR ERV1 0 447 1 9 1848 225 264 0 0 chrX 165579244 165579297 -1070999 - MIRc SINE MIR -123 145 93 9 1848 219 418 0 0 chrX 165580110 165580189 -1070107 + ID4_ SINE ID 5 83 0 9 1848 887 245 73 19 chrX 165580390 165580706 -1069590 + L1MB5 LINE L1 5825 6157 -17 9 1848 198 304 43 0 chrX 165580987 165581056 -1069240 + MIR SINE MIR 164 235 -27 1 1848 552 295 87 87 chrX 165581211 165581590 -1068706 + MTEa LTR MaLR 1 379 0 1 1848 354 258 77 6 chrX 165581672 165581828 -1068468 - L1MA7 LINE L1 -66 6225 6059 1 1848 1008 193 47 9 chrX 165582785 165582999 -1067297 + URR1A DNA MER1_type 5 226 0 1 1848 332 207 0 0 chrX 165583401 165583459 -1066837 + PB1D9 SINE Alu 15 72 -48 1 1848 260 329 29 0 chrX 165583459 165583471 -1066825 + B4 SINE B4 100 171 -121 1 1848 486 0 0 0 chrX 165583825 165583879 -1066417 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 1 1848 344 370 77 20 chrX 165584487 165584683 -1065613 - MER20 DNA MER1_type -7 212 6 1 1848 5288 56 7 4 chrX 165585350 165586026 -1064270 - L1Md_F2 LINE L1 -2 6580 5903 1 1848 462 224 127 8 chrX 165586243 165586369 -1063927 + MTE2a LTR MaLR 239 379 0 1 1848 21 36 0 0 chrX 165587026 165587054 -1063242 + AT_rich Low_complexity Low_complexity 1 28 0 1 1848 588 224 8 0 chrX 165587073 165587207 -1063089 - Lx6 LINE L1 -410 6640 6506 1 1848 2412 209 39 65 chrX 165587234 165588332 -1061964 - Lx6 LINE L1 -667 6391 5247 1 1848 348 244 6 18 chrX 165588547 165588718 -1061578 + CT-rich Low_complexity Low_complexity 1 169 0 1 1848 334 307 21 21 chrX 165588749 165588889 -1061407 - B1F SINE Alu -7 142 3 1 1848 225 94 0 0 chrX 165589352 165589384 -1060912 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 1 1848 828 148 18 12 chrX 165590443 165590607 -1059689 - Lx4A LINE L1 0 7058 6894 1 1848 246 247 158 12 chrX 165590755 165590837 -1059459 + MER5A DNA MER1_type 95 188 -1 1 1848 266 349 92 51 chrX 165592475 165592671 -1057625 + MER20 DNA MER1_type 16 219 0 1 1848 187 343 20 20 chrX 165593295 165593396 -1056900 - L2 LINE L2 -753 2666 2566 1 1848 210 250 41 14 chrX 165593729 165593802 -1056494 - L2 LINE L2 -1356 2063 1989 1 1848 508 217 7 7 chrX 165593885 165594024 -1056272 + GA-rich Low_complexity Low_complexity 2 140 0 1 1848 396 0 0 0 chrX 165594066 165594110 -1056186 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1848 6497 94 21 2 chrX 165594392 165595361 -1054935 - L1_Mus2 LINE L1 -52 5831 4845 1 1848 5020 92 1 0 chrX 165595359 165596065 -1054231 + L1_Mus2 LINE L1 5807 6513 -53 1 1848 24 32 0 0 chrX 165596082 165596113 -1054183 + AT_rich Low_complexity Low_complexity 1 31 0 1 1848 1154 71 0 0 chrX 165596639 165596780 -1053516 + B1_Mus2 SINE Alu 1 141 -6 1 1848 405 0 0 0 chrX 165596781 165596826 -1053470 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 1848 513 0 0 0 chrX 165596937 165596994 -1053302 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 1848 260 350 120 37 chrX 165597390 165597690 -1052606 - L2a LINE L2 -86 3340 3016 1 1848 33831 35 0 0 chrX 165597720 165603359 -1046937 + L1Md_T LINE L1 1 5589 -297 1 1848 9013 4 1 0 chrX 165603359 165604354 -1045942 + L1Md_T LINE L1 5590 6585 0 1 1848 4947 183 79 27 chrX 165604354 165605565 -1044731 + Lx2B LINE L1 5727 7000 0 1 1848 222 297 43 51 chrX 165605894 165606011 -1044285 - L2a LINE L2 -976 2443 2328 1 1848 453 309 16 0 chrX 165607329 165607455 -1042841 + RSINE1 SINE B4 2 129 -36 1 1848 387 0 0 0 chrX 165607458 165607501 -1042795 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1848 1406 284 106 40 chrX 165607992 165608906 -1041390 - L1MB8 LINE L1 -6 6172 5192 1 1848 555 16 0 0 chrX 165609555 165609619 -1040677 + (TTTC)n Simple_repeat Simple_repeat 3 66 0 1 1848 2855 61 0 6 chrX 165609621 165609986 -1040310 - L1_Mus1 LINE L1 -8 6559 6197 1 1848 2167 66 20 3 chrX 165609986 165610289 -1040007 + L1_Mus1 LINE L1 5880 6187 -380 1 1848 1305 164 19 0 chrX 165610291 165610505 -1039791 - URR1A DNA MER1_type -8 218 1 1 1848 180 0 0 0 chrX 165611148 165611168 -1039128 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 1848 522 0 0 0 chrX 165612004 165612062 -1038234 + (TC)n Simple_repeat Simple_repeat 2 59 0 1 1848 468 0 0 0 chrX 165612062 165612113 -1038183 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1848 374 165 0 12 chrX 165612897 165612977 -1037319 + (CA)n Simple_repeat Simple_repeat 1 79 0 1 1848 1517 248 6 15 chrX 165613017 165613357 -1036939 + Lx6 LINE L1 7122 7458 -2 1 1848 260 290 117 11 chrX 165613377 165613471 -1036825 - MIRb SINE MIR -119 149 46 1 1848 217 68 45 0 chrX 165613930 165613974 -1036322 + (TTTTTG)n Simple_repeat Simple_repeat 1 46 0 1 1848 359 366 39 28 chrX 165615130 165615310 -1034986 + MER3 DNA MER1_type 26 207 -2 1 1848 29 0 0 0 chrX 165617469 165617498 -1032798 + AT_rich Low_complexity Low_complexity 1 29 0 1 1848 225 0 0 0 chrX 165618811 165618836 -1031460 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1848 186 71 0 0 chrX 165619008 165619036 -1031260 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1848 402 21 0 0 chrX 165619355 165619402 -1030894 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1848 329 351 54 6 chrX 165620623 165620789 -1029507 - MIRb SINE MIR -14 254 81 1 1848 276 299 124 16 chrX 165621245 165621374 -1028922 - MIR3 SINE MIR -61 147 5 1 1848 210 191 0 0 chrX 165621907 165621949 -1028347 + GA-rich Low_complexity Low_complexity 4 45 0 1 1848 26 0 0 0 chrX 165621996 165622022 -1028274 + AT_rich Low_complexity Low_complexity 1 26 0 1 1848 255 285 65 105 chrX 165623449 165623602 -1026694 - MER5A DNA MER1_type 0 189 43 1 1848 1296 164 0 22 chrX 165625869 165626099 -1024197 + URR1B DNA MER1_type 1 225 0 1 1848 241 300 86 60 chrX 165626567 165626684 -1023612 + MIRc SINE MIR 91 210 -58 1 1848 721 249 58 84 chrX 165627050 165627312 -1022984 + L1MA4 LINE L1 5595 5866 -434 1 1848 3015 57 153 0 chrX 165627312 165627730 -1022566 + L1_Mus1 LINE L1 6085 6566 -1 1 1848 721 249 58 84 chrX 165627730 165627778 -1022518 + L1MA4 LINE L1 5867 5897 -403 1 1848 349 311 89 12 chrX 165627826 165628083 -1022213 + L1MA4 LINE L1 6003 6279 -21 1 1848 21 82 0 0 chrX 165628130 165628179 -1022117 + AT_rich Low_complexity Low_complexity 1 49 0 1 1848 38 0 0 0 chrX 165628197 165628235 -1022061 + AT_rich Low_complexity Low_complexity 1 38 0 1 1848 226 354 29 29 chrX 165629127 165629229 -1021067 + Lx8 LINE L1 7135 7236 -237 1 1848 3649 70 0 2 chrX 165629266 165629736 -1020560 + L1_Mus2 LINE L1 6096 6564 -2 1 1848 31 0 0 0 chrX 165631063 165631094 -1019202 + AT_rich Low_complexity Low_complexity 1 31 0 1 1848 2318 100 0 14 chrX 165631095 165631451 -1018845 - Lx3A LINE L1 -4 6977 6627 1 1848 260 305 12 47 chrX 165631472 165631558 -1018738 - B1_Mur1 SINE Alu 0 149 67 1 1848 249 224 45 0 chrX 165631968 165632035 -1018261 - L1MB8 LINE L1 -16 6168 6099 1 1848 22 0 0 0 chrX 165632117 165632139 -1018157 + AT_rich Low_complexity Low_complexity 1 22 0 1 1848 2163 55 0 4 chrX 165632139 165632415 -1017881 - L1_Mus1 LINE L1 -1 6566 6292 1 1848 250 223 186 114 chrX 165632418 165632585 -1017711 - L1MB8 LINE L1 -99 6079 5901 1 1848 538 274 38 19 chrX 165633297 165633457 -1016839 + RSINE1 SINE B4 3 165 0 1 1848 313 319 85 32 chrX 165633864 165634052 -1016244 - HAL1-3A_ME LINE L1 -384 2474 2277 1 1848 255 261 46 0 chrX 165634143 165634208 -1016088 - ID4 SINE ID -11 72 5 1 1848 305 343 82 0 chrX 165634278 165634412 -1015884 + Tigger5 DNA MER2_type 2262 2406 0 1 1848 275 246 0 68 chrX 165634575 165634649 -1015647 - MER5B DNA MER1_type -29 149 81 1 1848 245 367 20 10 chrX 165634687 165634786 -1015510 - MER5B DNA MER1_type -34 144 45 1 1848 627 288 92 35 chrX 165636044 165636382 -1013914 - L1ME3A LINE L1 -165 6008 5652 1 1848 627 51 0 0 chrX 165636599 165636678 -1013618 + (GA)n Simple_repeat Simple_repeat 1 79 0 1 1848 350 369 13 7 chrX 165636694 165636844 -1013452 - RSINE1 SINE B4 -12 153 3 1 1848 3213 89 2 0 chrX 165636963 165637401 -1012895 - L1_Mus1 LINE L1 -2 6565 6127 1 1848 470 268 28 49 chrX 165637937 165638288 -1012008 - Lx9 LINE L1 0 7644 7274 1 1848 250 219 46 15 chrX 165638305 165638370 -1011926 - B3 SINE B2 -103 113 47 1 1848 382 209 43 0 chrX 165638452 165638567 -1011729 - Lx9 LINE L1 -8 7636 7517 1 1848 486 0 0 0 chrX 165638567 165638621 -1011675 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 1848 470 342 91 12 chrX 165639190 165639433 -1010863 - MLT1D LTR MaLR -192 313 52 1 1848 809 88 0 0 chrX 165640081 165640194 -1010102 + L1_Mus2 LINE L1 6454 6566 0 1 1848 512 311 164 5 chrX 165640337 165640383 -1009913 + L1MB7 LINE L1 5605 5655 -529 1 1848 243 0 0 0 chrX 165640383 165640410 -1009886 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1848 456 19 0 0 chrX 165640411 165640464 -1009832 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 1848 512 311 164 5 chrX 165640464 165640799 -1009497 + L1MB7 LINE L1 5656 6046 -138 1 1848 365 298 56 11 chrX 165641874 165642065 -1008231 - RMER15 LTR ERVL -14 561 336 1 1848 1922 166 19 11 chrX 165642160 165642520 -1007776 + Lx2 LINE L1 6634 6996 -1 1 1848 456 294 23 16 chrX 165642637 165642765 -1007531 - MER58A DNA MER1_type -48 176 48 1 1848 522 0 0 0 chrX 165643139 165643197 -1007099 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1848 225 309 73 21 chrX 165644511 165644607 -1005689 - MER5B DNA MER1_type 0 178 78 1 1848 446 300 16 71 chrX 165644624 165644807 -1005489 - MER3 DNA MER1_type -29 180 8 1 1848 351 413 17 23 chrX 165644810 165645110 -1005186 + Lx8 LINE L1 6980 7277 -196 1 1848 594 218 250 18 chrX 165646367 165646535 -1003761 + B3 SINE B2 2 208 -8 1 1848 398 379 115 42 chrX 165647694 165648077 -1002219 - MLT1H LTR MaLR -24 525 115 1 1848 310 310 104 37 chrX 165648151 165648315 -1001981 - MLT1J1 LTR MaLR -266 178 4 1 1848 24 0 0 0 chrX 165649166 165649190 -1001106 + AT_rich Low_complexity Low_complexity 1 24 0 1 1848 737 277 24 14 chrX 165649295 165649504 -1000792 + B3 SINE B2 5 215 -1 1 1848 375 341 21 59 chrX 165649632 165649819 -1000477 + MIR SINE MIR 50 229 -33 1 1848 344 196 161 0 chrX 165650416 165650528 -999768 - Lx9 LINE L1 -7 7637 7508 1 1848 351 0 0 0 chrX 165651009 165651048 -999248 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 1848 22 35 0 0 chrX 165651048 165651077 -999219 + AT_rich Low_complexity Low_complexity 1 29 0 1 1848 324 167 0 0 chrX 165651149 165651221 -999075 + CT-rich Low_complexity Low_complexity 1 72 0 2 1848 25 0 0 0 chrX 165651413 165651438 -998858 + AT_rich Low_complexity Low_complexity 1 25 0 2 1848 499 311 45 25 chrX 165652179 165652377 -997919 + MIR SINE MIR 4 205 -57 2 1848 576 91 0 0 chrX 165652548 165652636 -997660 - Lx LINE L1 0 6654 6567 2 1848 506 343 21 7 chrX 165653060 165653204 -997092 - RSINE1 SINE B4 -17 148 3 2 1848 467 296 124 15 chrX 165653402 165653604 -996692 - MER58A DNA MER1_type 0 224 1 2 1848 260 348 124 9 chrX 165653619 165653732 -996564 - MIR SINE MIR -94 168 43 2 1848 273 321 0 0 chrX 165653938 165654022 -996274 + L2a LINE L2 3338 3421 -5 2 1848 213 309 62 39 chrX 165654871 165654999 -995297 - MIRb SINE MIR -66 202 72 2 1848 263 409 17 0 chrX 165655711 165655826 -994470 - MER20 DNA MER1_type 0 219 103 2 1848 204 40 0 0 chrX 165655827 165655852 -994444 + (TCTCTG)n Simple_repeat Simple_repeat 4 28 0 2 1848 329 158 12 0 chrX 165656048 165656130 -994166 + CT-rich Low_complexity Low_complexity 2 84 0 2 1848 285 321 38 0 chrX 165656143 165656249 -994047 - PB1D10 SINE Alu -7 110 1 2 1848 474 326 36 21 chrX 165656921 165657115 -993181 + MER58A DNA MER1_type 22 218 -6 2 1848 315 317 71 65 chrX 165657257 165657412 -992884 + RSINE1 SINE B4 3 158 -7 2 1848 265 318 16 0 chrX 165657498 165657561 -992735 + MER2 DNA MER2_type 272 335 -10 2 1848 291 54 0 0 chrX 165657813 165657850 -992446 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 1848 384 77 0 0 chrX 165659546 165659598 -990698 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1848 600 328 24 33 chrX 165659632 165659843 -990453 + MER20 DNA MER1_type 3 211 -8 2 1848 200 309 156 56 chrX 165661500 165661750 -988546 - L2 LINE L2 -1828 1591 1317 2 1848 864 305 50 30 chrX 165661911 165662352 -987944 + MLT1D LTR MaLR 6 498 -7 2 1848 313 211 130 13 chrX 165662417 165662494 -987802 + PB1D10 SINE Alu 9 94 -23 2 1848 192 125 0 0 chrX 165664280 165664312 -985984 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1848 226 387 70 18 chrX 165665673 165665844 -984452 - MLT1L LTR MaLR -166 444 265 2 1848 1654 53 0 0 chrX 165665844 165666050 -984246 - L1_Mm LINE L1 -3545 2338 2133 2 1848 3741 55 4 4 chrX 165666049 165666520 -983776 + L1Md_F2 LINE L1 6091 6561 -21 2 1848 764 165 6 0 chrX 165667136 165667294 -983002 + CT-rich Low_complexity Low_complexity 4 162 0 2 1848 631 274 50 28 chrX 165667294 165667512 -982784 - ID_B1 SINE B4 0 224 2 2 1848 276 30 0 0 chrX 165668071 165668104 -982192 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1848 1283 190 0 4 chrX 165668915 165669142 -981154 + URR1A DNA MER1_type 1 226 0 2 1848 410 282 9 9 chrX 165670272 165670383 -979913 - PB1D9 SINE Alu -8 112 2 2 1848 330 295 9 9 chrX 165671099 165671205 -979091 - L1MD3 LINE L1 -163 7832 7727 2 1848 682 343 14 5 chrX 165671709 165671926 -978370 + MER20 DNA MER1_type 1 219 0 2 1848 430 274 90 79 chrX 165672613 165672791 -977505 + B3 SINE B2 1 180 -36 2 1848 378 350 98 0 chrX 165672968 165673091 -977205 - MIRc SINE MIR -110 158 24 2 1848 271 318 45 38 chrX 165673851 165674008 -976288 - MamRep434 DNA TcMar -63 363 206 2 1848 222 220 0 39 chrX 165674860 165674912 -975384 - MIRb SINE MIR -51 217 168 2 1849 332 326 27 88 chrX 165675678 165675826 -974470 + MamSINE1 SINE tRNA 9 147 -143 2 1849 325 344 31 31 chrX 165676492 165676621 -973675 - MER20 DNA MER1_type -3 216 88 2 1849 309 235 0 14 chrX 165676752 165676821 -973475 + ID4_ SINE ID 3 70 -13 2 1849 23 33 0 0 chrX 165677069 165677099 -973197 + AT_rich Low_complexity Low_complexity 1 30 0 2 1849 691 292 39 0 chrX 165677261 165677439 -972857 - Lx8 LINE L1 -351 7122 6938 2 1849 497 270 78 11 chrX 165677483 165677663 -972633 - Tigger7 DNA MER2_type -21 2470 2279 2 1849 549 68 0 0 chrX 165677843 165677917 -972379 + (TG)n Simple_repeat Simple_repeat 2 75 0 2 1849 4496 47 9 0 chrX 165678928 165679482 -970814 - L1Md_F3 LINE L1 -14 6570 6012 2 1849 776 132 111 29 chrX 165679666 165679723 -970573 + Lx2 LINE L1 6812 6884 -113 2 1849 189 0 0 0 chrX 165679723 165679744 -970552 + (TGGG)n Simple_repeat Simple_repeat 3 23 0 2 1849 776 132 111 29 chrX 165679744 165679858 -970438 + Lx2 LINE L1 6885 6996 -1 2 1849 558 370 28 35 chrX 165679914 165680200 -970096 + B4A SINE B4 3 286 -6 2 1849 363 173 0 0 chrX 165680234 165680315 -969981 + (CA)n Simple_repeat Simple_repeat 2 82 0 2 1849 11150 105 5 15 chrX 165680496 165682355 -967941 - L1_Mus2 LINE L1 -537 6029 4193 2 1849 877 247 28 0 chrX 165682493 165682675 -967621 + B3 SINE B2 2 188 -28 2 1849 204 67 0 0 chrX 165683337 165683367 -966929 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1849 180 167 28 0 chrX 165684030 165684066 -966230 + L2c LINE L2 3340 3376 -11 2 1849 558 293 6 25 chrX 165684963 165685124 -965172 - RMER30 DNA MER1_type -1 201 44 2 1849 238 319 75 58 chrX 165685735 165685908 -964388 + MamRep4096 DNA hAT? 250 425 -1 2 1849 374 251 32 88 chrX 165687219 165687362 -962934 + B1F SINE Alu 6 141 -8 2 1849 328 292 0 28 chrX 165687384 165687491 -962805 + BC1_Mm scRNA scRNA 9 112 -40 2 1849 1074 90 7 27 chrX 165687859 165688008 -962288 + B1_Mus1 SINE Alu 2 147 -1 2 1849 216 111 0 0 chrX 165689459 165689495 -960801 + (A)n Simple_repeat Simple_repeat 1 36 0 2 1849 627 255 42 61 chrX 165689531 165689744 -960552 + B3 SINE B2 2 210 -6 2 1849 25 0 0 0 chrX 165689817 165689842 -960454 + AT_rich Low_complexity Low_complexity 1 25 0 2 1849 536 275 0 0 chrX 165690314 165690434 -959862 + PB1D9 SINE Alu 1 120 0 2 1849 301 324 59 70 chrX 165690446 165690718 -959578 + L1MC5 LINE L1 7242 7510 -451 2 1849 235 121 17 17 chrX 165690942 165691001 -959295 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 2 1849 346 38 0 37 chrX 165692717 165692771 -957525 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 1849 653 273 61 86 chrX 165693140 165693420 -956876 + B4A SINE B4 2 274 -18 2 1849 183 369 24 12 chrX 165693507 165693592 -956704 + L2a LINE L2 3298 3383 -43 2 1849 429 20 0 0 chrX 165693626 165693676 -956620 + (TGAA)n Simple_repeat Simple_repeat 2 51 0 2 1849 704 309 133 48 chrX 165695839 165696154 -954142 - MTEb LTR MaLR 0 379 43 2 1849 252 137 0 0 chrX 165696547 165696598 -953698 + (T)n Simple_repeat Simple_repeat 1 51 0 2 1849 2063 75 12 35 chrX 165696624 165696943 -953353 - L1_Mus2 LINE L1 -1 6565 6254 2 1849 282 253 89 33 chrX 165698065 165698155 -952141 - MIRb SINE MIR -75 193 99 2 1849 272 70 23 0 chrX 165698593 165698636 -951660 + (GA)n Simple_repeat Simple_repeat 1 44 0 2 1849 326 304 64 25 chrX 165700980 165701142 -949154 + MER20 DNA MER1_type 1 175 -608 2 1849 337 309 96 60 chrX 165701352 165701666 -948630 + L1MC4a LINE L1 5694 6018 -1864 2 1849 498 57 0 0 chrX 165702357 165702427 -947869 + (TC)n Simple_repeat Simple_repeat 2 71 0 2 1849 468 0 0 0 chrX 165702427 165702478 -947818 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1849 2006 102 23 13 chrX 165702748 165703055 -947241 - Lx2 LINE L1 0 6997 6688 2 1849 193 321 58 103 chrX 165703907 165704150 -946146 + L2c LINE L2 3110 3341 -46 2 1849 1132 150 119 5 chrX 165704414 165704615 -945681 + URR1B DNA MER1_type 2 225 0 2 1849 192 340 76 19 chrX 165704789 165704894 -945402 + MIRb SINE MIR 80 190 -78 2 1849 441 357 25 25 chrX 165705108 165705269 -945027 - MLT1J2 LTR MaLR -269 179 19 2 1849 21 36 0 0 chrX 165705507 165705535 -944761 + AT_rich Low_complexity Low_complexity 1 28 0 2 1849 225 0 0 0 chrX 165705961 165705986 -944310 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1849 326 156 49 8 chrX 165705986 165706109 -944187 + (CAGA)n Simple_repeat Simple_repeat 2 129 0 2 1849 315 0 0 0 chrX 165707401 165707436 -942860 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1849 257 304 83 47 chrX 165707664 165707833 -942463 + MER5B DNA MER1_type 2 176 -2 2 1849 230 357 98 43 chrX 165707854 165707915 -942381 + MIRb SINE MIR 21 78 -190 2 1849 369 0 0 0 chrX 165707915 165707956 -942340 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1849 230 357 98 43 chrX 165707956 165708128 -942168 + MIRb SINE MIR 79 266 -2 2 1849 237 306 45 143 chrX 165708234 165708296 -942000 + L2a LINE L2 3199 3252 -174 2 1849 898 163 0 0 chrX 165708296 165708443 -941853 - B1_Mur4 SINE Alu -2 148 2 2 1849 237 306 45 143 chrX 165708443 165708533 -941763 + L2a LINE L2 3253 3326 -100 2 1849 368 301 0 26 chrX 165708533 165708649 -941647 - PB1D10 SINE Alu 0 117 5 2 1849 237 306 45 143 chrX 165708649 165708739 -941557 + L2a LINE L2 3327 3417 -9 2 1849 21 57 0 0 chrX 165709320 165709355 -940941 + AT_rich Low_complexity Low_complexity 1 35 0 2 1849 1219 78 0 16 chrX 165710064 165710247 -940049 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2 1849 536 236 35 28 chrX 165710357 165710501 -939795 + B1F SINE Alu 5 149 0 2 1849 1646 236 55 13 chrX 165711530 165711912 -938384 + MTD LTR MaLR 6 403 -16 2 1849 301 282 23 25 chrX 165713310 165713430 -936866 - ID4_ SINE ID -30 122 1 2 1849 210 300 69 28 chrX 165713432 165713504 -936792 - B1F SINE Alu -41 108 34 2 1849 297 0 0 0 chrX 165713530 165713563 -936733 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 2 1849 430 278 157 0 chrX 165713576 165713691 -936605 + RSINE1 SINE B4 4 136 -29 2 1849 1986 60 28 3 chrX 165713735 165714017 -936279 + L1_Mus2 LINE L1 6276 6564 -2 3 1849 961 325 157 25 chrX 165714218 165715195 -935101 + L2a LINE L2 2308 3425 -1 3 1849 1611 88 21 0 chrX 165716365 165716598 -933698 + L1_Mus3 LINE L1 6393 6630 -8 3 1849 773 95 9 0 chrX 165716598 165716714 -933582 + (GGAGA)n Simple_repeat Simple_repeat 5 121 0 3 1849 536 53 0 69 chrX 165716722 165716823 -933473 + (GAAAA)n Simple_repeat Simple_repeat 2 95 0 3 1849 8946 52 76 2 chrX 165716893 165718079 -932217 + L1Md_F2 LINE L1 4313 5586 -297 3 1849 8343 28 4 0 chrX 165718079 165719056 -931240 + L1Md_F2 LINE L1 5587 6567 -15 3 1849 234 268 23 58 chrX 165719341 165719428 -930868 - MIR SINE MIR -113 149 66 3 1849 289 325 12 0 chrX 165720334 165720417 -929879 - RMER30 DNA MER1_type -1 201 118 3 1849 239 254 79 0 chrX 165722250 165722313 -927983 - MER5A1 DNA MER1_type -83 83 16 3 1849 311 275 12 48 chrX 165722506 165722590 -927706 - MER5B DNA MER1_type -97 81 1 3 1849 37259 55 1 24 chrX 165723137 165728819 -921477 + L1Md_T LINE L1 99 5586 -297 3 1849 8538 57 0 0 chrX 165728819 165729848 -920448 + L1Md_T LINE L1 5587 6582 0 3 1849 213 39 0 0 chrX 165730296 165730322 -919974 + (TTA)n Simple_repeat Simple_repeat 2 27 0 3 1849 337 259 103 0 chrX 165730722 165730838 -919458 - MER96B DNA hAT 0 417 290 3 1849 4108 67 0 0 chrX 165731291 165731772 -918524 + L1_Mus1 LINE L1 6087 6567 0 3 1849 267 297 125 9 chrX 165731952 165732064 -918232 + ID_B1 SINE B4 99 223 -1 3 1849 584 276 46 17 chrX 165732948 165733121 -917175 - LFSINE_Vert SINE SINE -53 406 229 3 1849 184 376 42 63 chrX 165735116 165735258 -915038 - L4 LINE RTE -209 1820 1682 3 1849 4197 114 61 0 chrX 165736789 165737379 -912917 - Lx2B LINE L1 -7 6993 6368 3 1849 226 311 112 9 chrX 165739209 165739316 -910980 - MLT1D LTR MaLR -138 367 250 3 1849 1885 22 0 70 chrX 165742630 165742873 -907423 + L1Md_F3 LINE L1 6358 6583 -1 3 1849 22 0 0 0 chrX 165742874 165742896 -907400 + AT_rich Low_complexity Low_complexity 1 22 0 3 1849 203 218 0 35 chrX 165744264 165744321 -905975 + A-rich Low_complexity Low_complexity 4 58 0 3 1849 296 256 98 129 chrX 165744600 165744793 -905503 - MER53 DNA hAT -6 187 1 3 1849 939 300 25 55 chrX 165744986 165745349 -904947 - MTEa LTR MaLR 0 379 28 3 1849 224 267 0 16 chrX 165746407 165746468 -903828 + GA-rich Low_complexity Low_complexity 2 61 0 3 1849 425 255 29 0 chrX 165746565 165746667 -903629 + MLT1B LTR MaLR 282 386 -4 3 1849 425 235 29 214 chrX 165747103 165747276 -903020 + MER5A DNA MER1_type 12 164 -25 3 1849 1278 228 96 30 chrX 165748383 165748718 -901578 - MTE2b LTR MaLR -7 372 16 3 1849 667 130 210 8 chrX 165749706 165749830 -900466 - B1_Mur4 SINE Alu 0 150 2 3 1849 248 384 0 0 chrX 165751979 165752052 -898244 + MER2 DNA MER2_type 2 74 -271 3 1849 723 302 6 12 chrX 165752064 165752228 -898068 + ID_B1 SINE B4 2 164 -60 3 1849 651 284 61 16 chrX 165752301 165752548 -897748 + MER2 DNA MER2_type 87 344 -1 3 1849 464 320 87 41 chrX 165753932 165754150 -896146 + MLT2B4 LTR ERVL 152 379 -177 3 1849 239 319 0 65 chrX 165754181 165754305 -895991 + MLT2B4 LTR ERVL 435 550 -6 3 1849 234 136 0 0 chrX 165755299 165755343 -894953 + (A)n Simple_repeat Simple_repeat 1 44 0 3 1849 270 203 63 63 chrX 165756296 165756375 -893921 + MIRc SINE MIR 69 147 -121 3 1849 279 338 91 19 chrX 165756761 165756915 -893381 - MER20 DNA MER1_type 0 219 55 3 1849 736 161 203 5 chrX 165757135 165757322 -892974 + URR1A DNA MER1_type 3 226 0 3 1849 1186 21 7 46 chrX 165758700 165758851 -891445 - B1_Mus1 SINE Alu 0 148 4 3 1849 555 221 189 61 chrX 165759109 165759321 -890975 + MTD LTR MaLR 57 295 -124 3 1849 277 266 25 0 chrX 165759388 165759467 -890829 - Lx9 LINE L1 -449 7195 7115 3 1849 237 233 67 0 chrX 165759472 165759532 -890764 - Lx9 LINE L1 -1233 6411 6348 3 1849 738 153 34 14 chrX 165759540 165759686 -890610 - URR1A DNA MER1_type 0 226 78 3 1849 691 211 7 45 chrX 165760724 165760878 -889418 + B1_Mur1 SINE Alu 2 149 0 3 1849 295 268 37 0 chrX 165762678 165762760 -887536 - MLT2C1 LTR ERVL -54 509 425 3 1849 248 227 0 57 chrX 165762981 165763051 -887245 - B3 SINE B2 0 216 151 3 1849 1292 166 198 150 chrX 165763104 165763543 -886753 + RMER6B LTR ERVK 1 460 -1 3 1849 23 54 0 0 chrX 165763734 165763771 -886525 + AT_rich Low_complexity Low_complexity 1 37 0 3 1849 3007 137 41 15 chrX 165763882 165764424 -885872 - RMER6A LTR ERVK 0 756 201 3 1849 13790 91 28 10 chrX 165764503 165767350 -882946 - L1VL2 LINE L1 -632 2983 77 3 1849 1416 108 9 0 chrX 165767353 165767565 -882731 - RMER6A LTR ERVK -542 214 1 3 1849 1126 279 150 74 chrX 165767730 165767923 -882373 - L1MA9 LINE L1 -7 6293 6057 3 1849 382 314 22 36 chrX 165767923 165768062 -882234 - B1F SINE Alu -12 137 1 3 1849 1126 303 80 77 chrX 165768062 165768665 -881631 - L1MA9 LINE L1 -256 6056 5443 3 1849 1862 100 162 14 chrX 165768665 165768949 -881347 - ORR1A3 LTR MaLR 0 326 1 3 1849 389 370 75 61 chrX 165768949 165769002 -881294 - L1MA9 LINE L1 -729 5442 5391 3 1849 330 26 0 0 chrX 165770557 165770596 -879700 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1849 399 350 24 30 chrX 165770938 165771103 -879193 + RSINE1 SINE B4 2 165 0 3 1849 822 315 82 24 chrX 165772033 165772292 -878004 - MTEa LTR MaLR -15 364 89 3 1849 324 0 0 0 chrX 165772292 165772328 -877968 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1849 822 315 82 24 chrX 165772328 165772409 -877887 - MTEa LTR MaLR -291 88 5 3 1849 682 129 7 28 chrX 165773682 165773826 -876470 + GA-rich Low_complexity Low_complexity 3 143 0 3 1849 1217 42 21 7 chrX 165773993 165774138 -876158 - B1_Mm SINE Alu 0 147 1 3 1849 2558 150 74 11 chrX 165774293 165774751 -875545 - Lx5 LINE L1 -888 6162 5676 3 1849 1059 156 201 0 chrX 165775190 165775369 -874927 + B3 SINE B2 2 216 0 3 1849 903 43 14 28 chrX 165775393 165775538 -874758 + (GAGAA)n Simple_repeat Simple_repeat 2 144 0 3 1849 257 268 114 14 chrX 165775918 165776058 -874238 - L1MC3 LINE L1 0 7785 7632 3 1849 423 290 77 33 chrX 165776247 165776429 -873867 + ORR1E LTR MaLR 3 192 -167 3 1849 364 286 75 81 chrX 165776612 165776772 -873524 - L1MC3 LINE L1 -242 7543 7385 3 1849 309 256 44 55 chrX 165776814 165776905 -873391 - MIR SINE MIR -126 136 47 3 1849 279 256 55 40 chrX 165777581 165777713 -872583 - Lx7 LINE L1 -9 7687 7554 3 1849 269 278 0 40 chrX 165777737 165777812 -872484 - Charlie5 DNA MER1_type -319 2305 2234 3 1849 354 80 0 0 chrX 165777903 165777953 -872343 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 3 1849 315 306 46 9 chrX 165777964 165778073 -872223 + B3A SINE B2 3 115 -83 3 1849 1089 50 43 0 chrX 165778336 165778477 -871819 + B1_Mus1 SINE Alu 2 148 0 3 1849 1135 71 0 0 chrX 165778699 165778840 -871456 + B1_Mus1 SINE Alu 2 142 -6 3 1849 378 0 0 0 chrX 165778841 165778883 -871413 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1849 1200 55 0 0 chrX 165779092 165779238 -871058 + B1_Mm SINE Alu 2 147 0 3 1849 180 0 0 0 chrX 165779238 165779258 -871038 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1849 413 272 35 56 chrX 165779260 165779404 -870892 - MER2B DNA MER2_type -42 294 154 3 1849 653 311 33 41 chrX 165779485 165779850 -870446 - LTR37B LTR ERV1 -18 450 89 3 1849 240 323 60 30 chrX 165779912 165780046 -870250 - MIRc SINE MIR -114 154 17 3 1849 591 310 8 25 chrX 165780942 165781177 -869119 + L1MEc LINE L1 49 279 -6121 3 1849 489 269 28 0 chrX 165781396 165781537 -868759 + L1MEc LINE L1 569 713 -5687 3 1849 348 288 166 4 chrX 165781556 165782104 -868192 + L1MEc LINE L1 1004 1640 -4760 3 1849 422 264 117 19 chrX 165782186 165782495 -867801 + L1MEc LINE L1 1796 2134 -4266 3 1849 31 26 0 0 chrX 165782650 165782688 -867608 + AT_rich Low_complexity Low_complexity 1 38 0 3 1849 405 293 84 34 chrX 165782723 165783080 -867216 + L1MB4 LINE L1 5637 6011 -169 3 1849 366 287 9 56 chrX 165783124 165783231 -867065 + PB1D7 SINE Alu 19 120 0 3 1849 22 35 0 0 chrX 165783303 165783332 -866964 + AT_rich Low_complexity Low_complexity 1 29 0 3 1849 8296 72 51 38 chrX 165783443 165784812 -865484 - L1VL4 LINE L1 -454 3105 1719 3 1849 19793 26 0 0 chrX 165784810 165787923 -862373 - L1Md_T LINE L1 0 6582 3470 3 1849 5200 85 52 14 chrX 165787922 165789411 -860885 - L1VL4 LINE L1 -1823 1736 190 3 1849 237 320 67 10 chrX 165790071 165790175 -860121 - B2_Mm2 SINE B2 -59 136 27 3 1849 376 258 89 26 chrX 165790239 165790430 -859866 + L1MEc LINE L1 2355 2557 -3762 3 1849 227 236 17 68 chrX 165790444 165790503 -859793 + MLT1E1 LTR MaLR 1 56 -598 3 1849 423 0 0 0 chrX 165791413 165791460 -858836 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1849 351 0 0 0 chrX 165791578 165791617 -858679 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1849 257 81 31 31 chrX 165793347 165793411 -856885 + (TTTG)n Simple_repeat Simple_repeat 2 65 0 3 1849 618 243 57 21 chrX 165793421 165793613 -856683 + ORR1E-int LTR MaLR 1323 1546 -34 3 1849 233 245 38 0 chrX 165793837 165793890 -856406 + ORR1E LTR MaLR 269 323 -36 3 1849 212 167 21 0 chrX 165796510 165796558 -853738 + GA-rich Low_complexity Low_complexity 1 49 0 3 1849 554 287 0 8 chrX 165797696 165797826 -852470 + B3A SINE B2 1 129 -69 3 1849 217 95 79 0 chrX 165797910 165797973 -852323 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 1849 1701 320 109 14 chrX 165798270 165799196 -851100 - Lx8 LINE L1 -255 7218 6205 3 1849 2105 141 54 6 chrX 165799479 165799829 -850467 - ORR1B2 LTR MaLR 0 367 1 3 1849 27 0 0 0 chrX 165800245 165800272 -850024 + AT_rich Low_complexity Low_complexity 1 27 0 3 1849 696 285 92 30 chrX 165800424 165800890 -849406 - L1MC3 LINE L1 -507 7278 6784 3 1849 504 148 1 4 chrX 165800921 165801016 -849280 - Lx2B LINE L1 -427 6631 6539 3 1849 368 186 30 40 chrX 165801012 165801113 -849183 + Lx3C LINE L1 6673 6772 -204 3 1849 466 276 42 12 chrX 165801110 165801275 -849021 + Lx4B LINE L1 6884 7053 -5 3 1849 216 111 0 0 chrX 165801276 165801312 -848984 + (TAA)n Simple_repeat Simple_repeat 1 36 0 3 1849 417 312 100 0 chrX 165801314 165801484 -848812 - L1MC3 LINE L1 -1054 6731 6545 3 1849 7473 134 91 12 chrX 165801909 165803241 -847055 - Lx4A LINE L1 -1 7057 5628 3 1849 459 0 0 0 chrX 165803241 165803292 -847004 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1849 7473 103 44 0 chrX 165803292 165803526 -846770 - Lx4A LINE L1 -1431 5627 5378 3 1849 883 126 0 0 chrX 165803523 165803666 -846630 - Lx4A LINE L1 -2422 3455 3313 3 1849 207 0 0 0 chrX 165803666 165803689 -846607 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 1849 2839 113 72 2 chrX 165803711 165804241 -846055 - Lx4A LINE L1 -3826 2051 1485 3 1849 285 263 50 72 chrX 165804292 165804316 -845980 + L1MD3 LINE L1 5742 5763 -2232 4 1849 1451 88 9 27 chrX 165804316 165804539 -845757 - L1_Mus2 LINE L1 0 6566 6348 4 1849 4469 52 35 0 chrX 165804539 165805131 -845165 + L1_Mus2 LINE L1 5732 6344 -222 4 1849 1309 137 16 64 chrX 165805125 165805340 -844956 - L1_Mur2 LINE L1 -4377 1500 1301 4 1849 4011 78 29 5 chrX 165805340 165805891 -844405 - L1Md_F2 LINE L1 0 6582 6019 4 1849 1309 128 13 89 chrX 165805891 165806054 -844242 - L1_Mur2 LINE L1 -5786 1300 1138 4 1850 1857 201 5 93 chrX 165808191 165808619 -841677 - RLTR26 LTR ERVK 0 642 253 4 1850 369 206 0 14 chrX 165808728 165808802 -841494 - RLTR26 LTR ERVK 0 642 570 4 1850 893 193 134 27 chrX 165808808 165809032 -841264 - RLTR26 LTR ERVK -394 248 1 4 1850 371 276 94 40 chrX 165809088 165809313 -840983 + RLTR12B LTR ERVK 3 246 -322 4 1850 451 264 27 0 chrX 165809724 165809834 -840462 - PB1D7 SINE Alu -7 113 1 4 1850 1381 98 41 38 chrX 165810870 165811141 -839155 - MT2C_Mm LTR ERVL 0 475 25 4 1850 13627 114 43 18 chrX 165811141 165813403 -836893 - MERVL-int LTR ERVL -3166 2319 1 4 1850 3538 87 2 4 chrX 165813403 165813879 -836417 - MT2C_Mm LTR ERVL 0 475 1 4 1850 189 94 0 0 chrX 165814056 165814088 -836208 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 4 1850 781 197 20 0 chrX 165814094 165814241 -836055 - B1_Mur4 SINE Alu 0 150 1 4 1850 637 311 33 22 chrX 165814716 165815083 -835213 - Lx9 LINE L1 -176 7468 7095 4 1850 2411 194 77 28 chrX 165815083 165815364 -834932 - RLTR31_Mm LTR ERVK 0 561 252 4 1850 3152 56 2 8 chrX 165815364 165815762 -834534 - MTA_Mm LTR MaLR 0 396 1 4 1850 2411 198 98 33 chrX 165815762 165816064 -834232 - RLTR31_Mm LTR ERVK -191 262 1 4 1850 487 266 87 39 chrX 165816074 165816281 -834015 - Lx9 LINE L1 -472 7172 6956 4 1850 535 36 36 0 chrX 165816304 165816388 -833908 - L1Md_F3 LINE L1 -2 6582 6496 4 1850 2019 41 0 0 chrX 165816399 165816675 -833621 - L1Md_T LINE L1 0 6582 6340 4 1850 3702 171 106 69 chrX 165816685 165817514 -832782 - RMER19B LTR ERVK -39 863 4 4 1850 601 307 34 0 chrX 165817526 165817764 -832532 - Lx9 LINE L1 -703 6941 6696 4 1850 272 253 33 0 chrX 165817774 165817865 -832431 - Lx9 LINE L1 -595 7049 6956 4 1850 780 275 6 6 chrX 165817981 165818194 -832102 - Lx9 LINE L1 -1079 6565 6244 4 1850 441 0 0 0 chrX 165818218 165818267 -832029 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1850 1090 185 41 10 chrX 165818365 165818656 -831640 - Lx9 LINE L1 -1678 5966 5626 4 1850 3259 143 50 15 chrX 165819037 165819636 -830660 + Lx3C LINE L1 6010 6719 -257 4 1850 3113 75 2 0 chrX 165819636 165820035 -830261 - MTB LTR MaLR 0 400 1 4 1850 3259 142 32 22 chrX 165820035 165820293 -830003 + Lx3C LINE L1 6720 6969 -7 4 1850 376 326 14 21 chrX 165820317 165820461 -829835 - L1MB5 LINE L1 -319 5855 5713 4 1850 1052 270 68 50 chrX 165820461 165820784 -829512 + MTE2b LTR MaLR 1 329 -50 4 1850 9752 62 9 5 chrX 165820784 165822138 -828158 + L1_Mur1 LINE L1 4443 5801 -85 4 1850 1052 58 0 61 chrX 165822163 165822310 -827986 + B1_Mm SINE Alu 1 138 -9 4 1850 198 0 0 0 chrX 165822310 165822332 -827964 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 4 1850 243 0 0 0 chrX 165822355 165822382 -827914 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1850 5747 86 8 0 chrX 165822393 165823172 -827124 + Lx3_Mus LINE L1 6206 6990 -19 4 1850 515 234 99 23 chrX 165824066 165824197 -826099 - B1_Mur2 SINE Alu -7 142 2 4 1850 300 304 123 12 chrX 165825553 165825723 -824573 + MER5A DNA MER1_type 1 189 0 4 1850 4908 126 37 16 chrX 165826517 165827259 -823037 + L1Md_F2 LINE L1 382 1154 -5462 4 1850 189 0 0 0 chrX 165827259 165827280 -823016 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 4 1850 31050 75 1 1 chrX 165827280 165831726 -818570 + L1Md_F2 LINE L1 1155 5586 -297 4 1850 7337 71 10 12 chrX 165831726 165832723 -817573 + L1Md_F2 LINE L1 5587 6581 -1 4 1850 423 0 0 0 chrX 165833060 165833107 -817189 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1850 723 24 0 0 chrX 165833135 165833220 -817076 + (GAA)n Simple_repeat Simple_repeat 2 86 0 4 1850 1127 259 30 46 chrX 165833220 165833524 -816772 + MTEa LTR MaLR 76 374 -5 4 1850 607 294 146 27 chrX 165834350 165834512 -815784 - MTEa LTR MaLR 0 379 202 4 1850 584 322 20 5 chrX 165834512 165834712 -815584 + B3 SINE B2 1 203 -13 4 1850 607 294 146 27 chrX 165834712 165834878 -815418 - MTEa LTR MaLR -178 201 12 4 1850 576 0 0 0 chrX 165835025 165835096 -815200 + L1Md_F2 LINE L1 6500 6570 -12 4 1850 524 333 6 0 chrX 165835098 165835254 -815042 + MER5A1 DNA MER1_type 9 165 -1 4 1850 434 324 83 17 chrX 165835956 165836437 -813859 - L1ME2 LINE L1 -182 5982 5470 4 1850 899 284 86 19 chrX 165836752 165837021 -813275 - B4 SINE B4 0 292 6 4 1850 328 207 49 0 chrX 165837548 165837630 -812666 - Lx7 LINE L1 -333 7363 7278 4 1850 252 317 8 16 chrX 165837812 165837934 -812362 + L1MC LINE L1 5143 5263 -883 4 1850 348 276 55 0 chrX 165838055 165838182 -812114 + MIR SINE MIR 103 236 -26 4 1850 327 145 0 31 chrX 165839162 165839226 -811070 + B2_Mm2 SINE B2 114 175 -20 4 1850 270 0 0 0 chrX 165839227 165839257 -811039 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 4 1850 1700 128 84 16 chrX 165839268 165839578 -810718 + RMER1C Other Other 1012 1342 0 4 1850 2145 187 29 0 chrX 165841041 165841415 -808881 - ORR1B1 LTR MaLR 0 394 10 4 1850 4661 39 9 0 chrX 165841843 165842408 -807888 + L1Md_F2 LINE L1 6013 6582 0 4 1850 2069 204 21 34 chrX 165843512 165844126 -806170 + L1_Mur1 LINE L1 800 1405 -2507 4 1850 208 0 62 0 chrX 165844126 165844158 -806138 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1850 942 215 31 15 chrX 165844158 165844218 -806078 + L1_Mur1 LINE L1 1406 1464 -2448 4 1850 3161 161 18 2 chrX 165844216 165844839 -805457 + L1_Mur1 LINE L1 2697 3329 -2557 4 1850 455 300 4 200 chrX 165844846 165844934 -805362 - MTE2b LTR MaLR -108 271 203 4 1850 783 0 0 0 chrX 165844934 165845021 -805275 + (GAGAA)n Simple_repeat Simple_repeat 3 89 0 4 1850 455 300 4 200 chrX 165845021 165845207 -805089 - MTE2b LTR MaLR -177 202 51 4 1850 195 345 17 33 chrX 165845286 165845406 -804890 + L2 LINE L2 2595 2712 -707 4 1850 24 0 0 0 chrX 165846471 165846495 -803801 + AT_rich Low_complexity Low_complexity 1 24 0 4 1850 261 0 0 0 chrX 165846794 165846823 -803473 + (TATG)n Simple_repeat Simple_repeat 2 30 0 4 1850 1218 104 5 72 chrX 165847801 165848009 -802287 + B2_Mm2 SINE B2 1 194 -1 4 1850 6194 128 4 4 chrX 165848025 165848961 -801335 + Lx2B LINE L1 6064 6999 -1 4 1850 33829 35 1 0 chrX 165849338 165855212 -795084 + L1Md_T LINE L1 1 5589 -297 4 1850 8908 6 6 0 chrX 165855212 165856202 -794094 + L1Md_T LINE L1 5590 6585 0 4 1850 565 294 103 34 chrX 165856260 165856335 -793961 - MER20 DNA MER1_type -1 218 147 4 1850 399 41 0 0 chrX 165856335 165856384 -793912 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 1850 1763 68 4 42 chrX 165856385 165856644 -793652 - L1_Mus2 LINE L1 0 6566 6318 4 1850 565 294 103 34 chrX 165856644 165856770 -793526 - MER20 DNA MER1_type -73 146 1 4 1850 327 49 0 0 chrX 165857497 165857538 -792758 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 1850 30 27 0 0 chrX 165857568 165857605 -792691 + AT_rich Low_complexity Low_complexity 1 37 0 4 1850 506 122 0 0 chrX 165859801 165859891 -790405 + L1_Mus3 LINE L1 6546 6635 -3 4 1850 233 341 79 45 chrX 165860531 165860709 -789587 + MIR SINE MIR 20 203 -59 4 1850 396 284 0 0 chrX 165860843 165860931 -789365 + B1F SINE Alu 52 139 -10 4 1850 783 260 44 80 chrX 165860991 165861215 -789081 - Lx6 LINE L1 -27 7433 7235 4 1850 1704 46 19 0 chrX 165861215 165861431 -788865 + L1Md_F3 LINE L1 6351 6570 -14 4 1850 783 260 44 80 chrX 165861431 165861595 -788701 - Lx6 LINE L1 -226 7234 7060 4 1850 197 65 0 31 chrX 165862623 165862655 -787641 + (CCCCCT)n Simple_repeat Simple_repeat 6 36 0 4 1850 585 0 0 0 chrX 165862797 165862862 -787434 + (TCC)n Simple_repeat Simple_repeat 2 66 0 4 1850 209 146 0 20 chrX 165862949 165862998 -787298 + (TTG)n Simple_repeat Simple_repeat 1 48 0 4 1850 296 315 45 18 chrX 165863045 165863155 -787141 - RSINE1 SINE B4 -49 116 4 4 1850 379 348 60 18 chrX 165863183 165863350 -786946 + MLT1G3 LTR MaLR 1 174 -421 4 1850 703 152 104 0 chrX 165863557 165863682 -786614 + MTC LTR MaLR 10 147 -274 4 1850 21 36 0 0 chrX 165863956 165863984 -786312 + AT_rich Low_complexity Low_complexity 1 28 0 4 1850 470 240 21 0 chrX 165864292 165864388 -785908 + B1F SINE Alu 8 105 -44 4 1850 370 23 0 0 chrX 165864776 165864820 -785476 - L1_Mm LINE L1 -951 4932 4889 4 1850 2606 54 66 0 chrX 165864820 165865153 -785143 + L1Md_T LINE L1 6227 6581 -1 4 1850 2955 39 3 0 chrX 165865542 165865898 -784398 + L1Md_F2 LINE L1 6225 6581 -1 4 1850 598 325 29 0 chrX 165866280 165866489 -783807 + B3 SINE B2 1 215 -1 4 1850 746 182 2 24 chrX 165866673 165866810 -783486 + B1_Mus2 SINE Alu 12 146 -1 4 1850 461 349 48 71 chrX 165866916 165867020 -783276 + HAL1 LINE L1 1254 1344 -1163 4 1850 4789 179 10 33 chrX 165867020 165867950 -782346 + RMER13B LTR ERVK 1 908 0 4 1850 461 349 48 71 chrX 165867950 165868197 -782099 + HAL1 LINE L1 1345 1597 -910 4 1850 230 292 45 0 chrX 165868263 165868352 -781944 + HAL1 LINE L1 1727 1819 -688 4 1850 362 295 111 32 chrX 165868403 165868529 -781767 + MLT1E LTR MaLR 63 198 -482 4 1850 187 29 0 79 chrX 165868533 165868571 -781725 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 4 1850 270 0 0 0 chrX 165868621 165868651 -781645 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 4 1850 426 277 142 65 chrX 165868811 165869190 -781106 - RLTR16 LTR ERVK -48 457 1 4 1850 3432 171 125 85 chrX 165869190 165869992 -780304 - MYSERV16_I-int LTR ERVK 0 2326 1476 4 1850 1150 65 0 0 chrX 165869992 165870131 -780165 - B1_Mus2 SINE Alu -8 139 1 4 1850 3432 171 125 85 chrX 165870131 165870369 -779927 - MYSERV16_I-int LTR ERVK -851 1475 1225 4 1850 1109 62 7 14 chrX 165870369 165870516 -779780 + B1_Mus2 SINE Alu 1 146 -1 4 1850 3432 226 73 88 chrX 165870516 165870972 -779324 - MYSERV16_I-int LTR ERVK -1102 1224 618 4 1850 767 220 63 51 chrX 165870991 165871245 -779051 - MYSERV16_I-int LTR ERVK -1782 544 288 4 1850 995 170 81 50 chrX 165871265 165871563 -778733 - RMER3D-int LTR ERVK -1464 1378 1072 4 1850 944 292 113 1 chrX 165871613 165871953 -778343 + MLT1E LTR MaLR 279 624 -29 4 1850 333 321 136 15 chrX 165871956 165872155 -778141 + HAL1 LINE L1 1866 2088 -419 4 1850 234 0 0 0 chrX 165872297 165872323 -777973 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 1850 355 342 6 26 chrX 165872428 165872584 -777712 + RSINE1 SINE B4 3 155 -10 4 1850 219 69 0 0 chrX 165872613 165872642 -777654 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 4 1850 288 186 0 0 chrX 165873370 165873429 -776867 + CT-rich Low_complexity Low_complexity 3 61 0 4 1850 1664 268 43 31 chrX 165873438 165874058 -776238 - Lx9 LINE L1 -151 7493 6866 4 1850 576 42 0 0 chrX 165874742 165874813 -775483 + (TCTCCC)n Simple_repeat Simple_repeat 6 76 0 4 1850 6821 188 88 39 chrX 165874827 165877252 -773044 + Lx5 LINE L1 4321 6871 -179 5 1850 22 70 0 0 chrX 165877988 165878031 -772265 + AT_rich Low_complexity Low_complexity 1 43 0 5 1850 264 100 0 0 chrX 165878224 165878264 -772032 + (TAAAA)n Simple_repeat Simple_repeat 4 43 0 5 1850 511 269 117 72 chrX 165878307 165878487 -771809 - B3A SINE B2 -2 214 27 5 1850 219 36 0 0 chrX 165878627 165878655 -771641 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 5 1850 207 234 25 38 chrX 165878657 165878737 -771559 + A-rich Low_complexity Low_complexity 1 79 0 5 1850 5235 20 0 17 chrX 165878748 165879110 -771186 + L1Md_T LINE L1 4942 5303 -580 5 1850 4782 6 0 0 chrX 165879110 165879636 -770660 + L1Md_T LINE L1 6057 6582 0 5 1850 5235 20 0 17 chrX 165879636 165879929 -770367 + L1Md_T LINE L1 5304 5586 -297 5 1850 8557 29 0 0 chrX 165879929 165880925 -769371 + L1Md_T LINE L1 5587 6582 0 5 1850 487 291 49 20 chrX 165880939 165881142 -769154 - Lx7 LINE L1 -396 7300 7092 5 1850 13288 166 52 85 chrX 165881269 165886491 -763805 - Lx4A LINE L1 -1 7057 2062 5 1850 420 37 0 0 chrX 165886491 165886545 -763751 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1850 13288 157 24 56 chrX 165886545 165888362 -761934 - Lx4A LINE L1 -3816 2061 375 5 1850 516 324 97 14 chrX 165889459 165889666 -760630 + RCHARR1 DNA MER1_type 57 280 -694 5 1850 1056 299 51 38 chrX 165889716 165890032 -760264 + MTE2a LTR MaLR 58 377 -2 5 1850 1931 248 57 28 chrX 165890073 165890725 -759571 + RCHARR1 DNA MER1_type 287 957 -17 5 1850 26 50 0 0 chrX 165891537 165891577 -758719 + AT_rich Low_complexity Low_complexity 1 40 0 5 1850 215 276 35 0 chrX 165891622 165891680 -758616 - MIRm SINE MIR -8 268 209 5 1850 288 322 0 11 chrX 165891887 165891981 -758315 + PB1D10 SINE Alu 18 110 -7 5 1850 509 118 131 7 chrX 165892898 165893035 -757261 - Lx2A1 LINE L1 -4 7004 6851 5 1850 984 93 0 14 chrX 165893017 165893159 -757137 + Lx2A1 LINE L1 6682 6821 -187 5 1850 950 0 0 9 chrX 165893501 165893612 -756684 + (TTC)n Simple_repeat Simple_repeat 2 111 0 5 1850 381 216 78 92 chrX 165893818 165893971 -756325 - RLTR14 LTR ERV1 -8 374 224 5 1850 441 0 0 0 chrX 165893987 165894036 -756260 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1850 7260 73 1 20 chrX 165894283 165895568 -754728 - L1Md_F2 LINE L1 -2 6580 5321 5 1850 7018 72 8 0 chrX 165895567 165896495 -753801 + L1Md_F2 LINE L1 4383 5317 -566 5 1850 267 284 10 31 chrX 165896934 165897032 -753264 + GA-rich Low_complexity Low_complexity 1 96 0 5 1850 993 81 0 81 chrX 165897316 165897477 -752819 + B1_Mus1 SINE Alu 1 148 0 5 1850 321 117 0 0 chrX 165897477 165897537 -752759 + (A)n Simple_repeat Simple_repeat 1 60 0 5 1850 34 89 0 0 chrX 165898692 165898782 -751514 + AT_rich Low_complexity Low_complexity 1 90 0 5 1850 365 284 0 74 chrX 165898783 165898878 -751418 - RSINE1 SINE B4 0 165 78 5 1850 805 290 68 41 chrX 165898968 165899306 -750990 - Lx8 LINE L1 0 7473 7127 5 1850 227 253 137 0 chrX 165899475 165899570 -750726 - ORR1E LTR MaLR 0 379 272 5 1850 265 372 26 9 chrX 165899712 165899826 -750470 - ORR1E LTR MaLR -225 134 19 5 1850 663 191 66 44 chrX 165899973 165900110 -750186 - B1_Mur4 SINE Alu -6 144 5 5 1850 304 256 42 60 chrX 165900716 165900882 -749414 - Lx9 LINE L1 -20 7624 7462 5 1850 621 175 33 0 chrX 165900955 165901075 -749221 - Lx9 LINE L1 -654 6990 6867 5 1850 2254 158 165 11 chrX 165901078 165901538 -748758 - RMER5 LTR ERV1 0 534 4 5 1850 2672 234 26 14 chrX 165901559 165902140 -748156 - Lx9 LINE L1 -795 6849 6262 5 1850 36 70 0 0 chrX 165902180 165902251 -748045 + AT_rich Low_complexity Low_complexity 1 71 0 5 1850 841 305 54 15 chrX 165902310 165902570 -747726 - B4 SINE B4 -8 284 15 5 1850 24 77 0 0 chrX 165902721 165902773 -747523 + AT_rich Low_complexity Low_complexity 1 52 0 5 1850 452 246 135 5 chrX 165903271 165903396 -746900 - B1_Mur1 SINE Alu -7 142 6 5 1850 389 318 126 48 chrX 165903601 165903832 -746464 + MIR SINE MIR 4 252 -10 5 1850 287 260 26 0 chrX 165904685 165904762 -745534 + MIR3 SINE MIR 125 203 -5 5 1850 2695 191 8 8 chrX 165905421 165905917 -744379 + Lx5 LINE L1 6555 7050 0 5 1850 239 225 0 24 chrX 165906004 165906086 -744210 + CT-rich Low_complexity Low_complexity 1 80 0 5 1850 1198 254 103 2 chrX 165906823 165907326 -742970 + RCHARR1 DNA MER1_type 72 625 -349 5 1850 759 220 91 0 chrX 165907333 165907542 -742754 + RCHARR1 DNA MER1_type 747 974 0 5 1850 279 0 0 0 chrX 165909176 165909207 -741089 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1850 444 37 0 0 chrX 165909348 165909402 -740894 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1850 488 280 113 51 chrX 165909408 165909664 -740632 - B4 SINE B4 -19 273 2 5 1850 21 71 0 0 chrX 165909746 165909788 -740508 + AT_rich Low_complexity Low_complexity 1 42 0 5 1850 279 307 166 14 chrX 165910871 165911010 -739286 - MER5A DNA MER1_type -22 167 8 5 1850 1395 75 16 5 chrX 165911184 165911371 -738925 + B2_Mm2 SINE B2 1 189 -6 5 1850 270 321 122 14 chrX 165912942 165913081 -737215 - MIR SINE MIR -53 155 2 5 1850 279 393 88 33 chrX 165913777 165914077 -736219 - L2c LINE L2 -70 3317 3003 5 1850 271 271 17 0 chrX 165914257 165914316 -735980 - Zaphod2 DNA Tip100 0 3524 3465 5 1850 910 182 167 0 chrX 165914320 165914512 -735784 + URR1B DNA MER1_type 1 224 -1 5 1850 507 211 0 37 chrX 165914732 165914840 -735456 + L1_Mur3 LINE L1 5395 5498 -382 5 1850 518 166 19 195 chrX 165914840 165914949 -735347 - L1_Mur3 LINE L1 -483 5397 5323 5 1850 6032 32 1 3 chrX 165914949 165915668 -734628 - L1Md_A LINE L1 -2 6580 5863 5 1850 518 166 19 195 chrX 165915668 165915768 -734528 - L1_Mur3 LINE L1 -558 5322 5225 5 1850 377 244 0 0 chrX 165915786 165915864 -734432 + Lx7 LINE L1 5150 5227 -653 5 1850 6441 246 43 27 chrX 165915863 165917710 -732586 + Lx7 LINE L1 5493 7360 -336 5 1850 180 111 0 0 chrX 165917729 165917756 -732540 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1850 4157 52 9 0 chrX 165917824 165918362 -731934 - L1VL1 LINE L1 -5457 965 423 5 1850 705 118 0 0 chrX 165918358 165918460 -731836 - L1VL1 LINE L1 -6131 291 190 5 1850 2895 70 0 3 chrX 165918460 165918846 -731450 + L1_Mus1 LINE L1 6183 6567 0 5 1850 237 309 11 0 chrX 165918859 165918953 -731343 + Lx7 LINE L1 7579 7673 -23 5 1850 210 143 0 0 chrX 165919472 165919521 -730775 + (T)n Simple_repeat Simple_repeat 1 49 0 5 1850 1172 75 0 0 chrX 165919521 165919668 -730628 - B1_Mus2 SINE Alu 0 147 1 5 1850 282 73 0 0 chrX 165919733 165919774 -730522 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1850 255 79 0 0 chrX 165919802 165919840 -730456 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 5 1850 23 0 0 0 chrX 165920491 165920514 -729782 + AT_rich Low_complexity Low_complexity 1 23 0 5 1850 6593 152 98 27 chrX 165921468 165921709 -728587 - Lx2B LINE L1 -2132 3748 3479 5 1850 807 11 0 0 chrX 165921709 165921801 -728495 + (TTC)n Simple_repeat Simple_repeat 2 93 0 5 1850 6593 166 59 79 chrX 165921801 165922848 -727448 - Lx2B LINE L1 -433 3481 2407 5 1850 1972 153 119 27 chrX 165922848 165923251 -727045 + RMER19B LTR ERVK 306 745 -157 5 1850 6593 166 59 79 chrX 165923251 165923872 -726424 - Lx2B LINE L1 -433 2406 1767 5 1850 793 158 65 0 chrX 165923872 165924011 -726285 - B1_Mus1 SINE Alu 0 148 1 5 1850 6380 200 83 71 chrX 165924011 165924960 -725336 - Lx2B LINE L1 -4114 1766 748 5 1850 339 325 0 0 chrX 165925431 165925511 -724785 - ID_B1 SINE B4 -63 161 82 5 1850 297 75 0 0 chrX 165925515 165925555 -724741 + (TATG)n Simple_repeat Simple_repeat 2 41 0 5 1850 252 101 13 92 chrX 165925566 165925584 -724712 + T-rich Low_complexity Low_complexity 53 71 0 5 1850 839 166 14 0 chrX 165925584 165925729 -724567 - B1_Mur3 SINE Alu 0 149 3 5 1850 252 101 13 92 chrX 165925729 165925771 -724525 + T-rich Low_complexity Low_complexity 17 52 0 5 1850 1199 34 7 0 chrX 165925771 165925917 -724379 - B1_Mm SINE Alu 0 147 1 5 1850 252 101 13 92 chrX 165925917 165925931 -724365 + T-rich Low_complexity Low_complexity 3 16 0 5 1850 489 34 0 0 chrX 165926326 165926385 -723911 + (GA)n Simple_repeat Simple_repeat 2 60 0 5 1850 1881 62 25 0 chrX 165927095 165927336 -722960 - L1_Mus1 LINE L1 0 6567 6321 5 1850 3209 58 5 17 chrX 165927427 165927849 -722447 + L1_Mus1 LINE L1 6150 6566 -1 5 1850 526 372 97 32 chrX 165928012 165928259 -722037 + B4A SINE B4 30 292 0 5 1850 586 227 34 0 chrX 165928432 165928551 -721745 + B1_Mur1 SINE Alu 27 149 0 5 1850 232 222 95 0 chrX 165928811 165928874 -721422 - L1ME1 LINE L1 -98 6081 6013 5 1850 1694 77 0 33 chrX 165928884 165929127 -721169 - L1_Mus2 LINE L1 0 6566 6332 5 1850 6391 46 10 5 chrX 165929179 165929981 -720315 - L1Md_F2 LINE L1 -1 6581 5776 5 1850 868 308 97 64 chrX 165930020 165930412 -719884 + MLT1A1 LTR MaLR 2 406 -2 5 1850 666 329 25 25 chrX 165930418 165930771 -719525 - L1MD1 LINE L1 -316 5926 5574 5 1850 251 322 89 0 chrX 165931827 165931917 -718379 - MIR SINE MIR -150 112 15 5 1850 255 299 10 0 chrX 165932209 165932306 -717990 + L1ME3 LINE L1 5628 5725 -439 5 1850 6391 151 10 14 chrX 165932579 165933826 -716470 - Lx LINE L1 0 6654 5418 5 1850 6364 164 21 3 chrX 165933825 165933898 -716398 + L1_Mur2 LINE L1 4214 4285 -1592 5 1850 396 59 0 0 chrX 165933898 165933949 -716347 + (TATG)n Simple_repeat Simple_repeat 2 52 0 5 1850 6364 164 21 3 chrX 165933949 165935040 -715256 + L1_Mur2 LINE L1 4286 5398 -479 5 1850 246 303 60 18 chrX 165935036 165935171 -715125 + L1ME3 LINE L1 6018 6156 -6 5 1850 232 279 33 0 chrX 165935283 165935344 -714952 - B1F1 SINE Alu -7 142 80 5 1850 228 62 0 0 chrX 165935347 165935379 -714917 - L1Md_F2 LINE L1 -547 6035 6004 5 1850 8140 45 3 4 chrX 165935378 165936373 -713923 - L1Md_F2 LINE L1 -2 6580 5587 5 231 9283 48 3 1 chrX 165936386 165937695 -712601 - L1Md_F2 LINE L1 -570 6012 4703 5 1851 639 133 0 9 chrX 165937713 165937819 -712477 + Lx LINE L1 5357 5461 -422 5 1851 3907 110 19 5 chrX 165938469 165939176 -711120 + Lx LINE L1 5441 6154 -500 5 1851 4933 36 0 0 chrX 165939172 165939902 -710394 - L1Md_F2 LINE L1 -560 6022 5293 5 1851 4405 40 44 2 chrX 165939902 165940452 -709844 + L1Md_F2 LINE L1 6009 6581 -1 5 1851 3070 117 21 13 chrX 165940485 165940961 -709335 + Lx LINE L1 6141 6620 -34 5 1851 747 238 11 5 chrX 165941503 165941689 -708607 - L1MB8 LINE L1 -203 5975 5789 5 1851 642 160 8 40 chrX 165942021 165942145 -708151 + URR1B DNA MER1_type 82 201 -24 5 1851 468 359 82 0 chrX 165942199 165942444 -707852 + MLT1E2 LTR MaLR 361 625 -2 5 1851 24 67 0 0 chrX 165942601 165942646 -707650 + AT_rich Low_complexity Low_complexity 1 45 0 5 1851 23 0 0 0 chrX 165942997 165943020 -707276 + AT_rich Low_complexity Low_complexity 1 23 0 5 1851 424 256 86 66 chrX 165943987 165944275 -706021 - ORR1E LTR MaLR 0 374 81 5 1851 450 0 0 0 chrX 165944473 165944523 -705773 + (TTTA)n Simple_repeat Simple_repeat 1 50 0 5 1851 2283 197 171 10 chrX 165944535 165945016 -705280 + Lx9 LINE L1 6952 7477 -167 6 1851 351 0 0 0 chrX 165945016 165945055 -705241 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1851 2283 197 171 10 chrX 165945055 165945163 -705133 + Lx9 LINE L1 7478 7635 -9 6 1851 701 327 42 31 chrX 165945250 165945509 -704787 + B4A SINE B4 9 270 -22 6 1851 270 0 0 0 chrX 165945523 165945553 -704743 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1851 513 0 0 0 chrX 165945553 165945609 -704687 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 1851 200 259 0 33 chrX 165945826 165945886 -704410 + L2c LINE L2 3209 3266 -121 6 1851 269 131 0 16 chrX 165946077 165946139 -704157 + (GGAA)n Simple_repeat Simple_repeat 2 62 0 6 1851 486 295 202 61 chrX 165946139 165946417 -703879 - ORR1E LTR MaLR -56 314 1 5 1851 216 0 0 0 chrX 165947894 165947918 -702378 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1851 781 261 111 15 chrX 165948073 165948334 -701962 - B4 SINE B4 -2 290 5 6 1851 411 21 0 0 chrX 165948469 165948517 -701779 + (TA)n Simple_repeat Simple_repeat 2 49 0 6 1851 13725 96 2 1 chrX 165948811 165951405 -698891 - L1_Mus1 LINE L1 -1 6566 3969 6 1851 26902 80 90 3 chrX 165951406 165957061 -693235 - L1Md_F2 LINE L1 -3 6579 391 6 1851 20875 163 20 17 chrX 165957063 165961671 -688625 - L1VL4 LINE L1 -514 5372 749 6 1851 24 53 0 0 chrX 165961691 165961729 -688567 + AT_rich Low_complexity Low_complexity 1 38 0 6 1851 230 179 18 0 chrX 165961984 165962040 -688256 + (TA)n Simple_repeat Simple_repeat 2 58 0 6 1851 424 209 107 18 chrX 165962292 165962404 -687892 - Lx8 LINE L1 -530 6943 6822 6 1851 1192 221 64 58 chrX 165962394 165962550 -687746 + Lx7 LINE L1 7083 7235 -461 6 1851 267 31 0 0 chrX 165962550 165962582 -687714 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 6 1851 1192 221 64 58 chrX 165962582 165962770 -687526 + Lx7 LINE L1 7236 7429 -267 6 1851 396 0 0 0 chrX 165962789 165962833 -687463 + (GA)n Simple_repeat Simple_repeat 2 45 0 6 1851 225 139 0 0 chrX 165963395 165963438 -686858 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 1851 221 350 80 47 chrX 165963563 165963713 -686583 - MIRc SINE MIR -103 165 11 6 1851 312 27 0 0 chrX 165964119 165964156 -686140 + (TCTCTG)n Simple_repeat Simple_repeat 2 38 0 6 1851 339 243 0 13 chrX 165964167 165964242 -686054 - HAL1-3A_ME LINE L1 -809 2049 1976 6 1851 306 0 0 0 chrX 165964578 165964612 -685684 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 6 1851 1073 226 33 22 chrX 165965021 165965292 -685004 + L1Md_F LINE L1 578 851 -5668 6 1851 600 264 116 1 chrX 165965302 165965503 -684793 + ORR1D-int LTR MaLR 1174 1552 -28 6 1851 737 61 9 0 chrX 165965524 165965638 -684658 - L1Md_F2 LINE L1 -13 6569 6455 6 1851 3187 73 0 2 chrX 165965638 165966048 -684248 + L1Md_F2 LINE L1 6026 6434 -148 6 1851 2248 128 5 1 chrX 165966058 165966497 -683799 + L1VL4 LINE L1 630 1069 -2490 6 1851 2471 63 0 0 chrX 165966474 165966793 -683503 - L1Md_F2 LINE L1 -571 6011 5693 6 1851 3278 72 156 32 chrX 165966774 165966998 -683298 + L1Md_F2 LINE L1 5985 6240 -342 6 1851 2864 52 54 0 chrX 165966998 165967366 -682930 + RLTR10 LTR ERVK 1 388 -2 6 1851 3278 72 156 32 chrX 165967366 165967672 -682624 + L1Md_F2 LINE L1 6241 6581 -1 6 1851 28053 116 5 12 chrX 165967666 165972885 -677411 + L1_Mus2 LINE L1 1386 6565 -1 6 1851 23 33 0 0 chrX 165973073 165973103 -677193 + AT_rich Low_complexity Low_complexity 1 30 0 6 1851 567 299 115 23 chrX 165973873 165973965 -676331 + RMER15 LTR ERVL 276 369 -206 6 1851 189 0 0 0 chrX 165973965 165973986 -676310 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 6 1851 567 299 115 23 chrX 165973986 165974153 -676143 + RMER15 LTR ERVL 370 558 -17 6 1851 228 316 31 10 chrX 165974336 165974432 -675864 - MIRc SINE MIR -131 137 40 6 1851 1659 74 0 0 chrX 165976323 165976540 -673756 + Lx LINE L1 5629 5845 -809 6 1851 655 291 103 20 chrX 165977317 165977520 -672776 - B4A SINE B4 0 292 73 6 1851 307 308 59 22 chrX 165977553 165977689 -672607 - MLT1L LTR MaLR -291 319 179 6 1851 4014 63 6 11 chrX 165977820 165978351 -671945 - L1Md_F2 LINE L1 -10 6572 6045 6 1851 248 327 0 0 chrX 165978666 165978721 -671575 + MER58A DNA MER1_type 3 57 -167 6 1851 23 33 0 0 chrX 165978991 165979021 -671275 + AT_rich Low_complexity Low_complexity 1 30 0 6 1851 207 0 0 0 chrX 165979204 165979227 -671069 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 6 1851 479 354 55 6 chrX 165979248 165979413 -670883 + Lx8 LINE L1 7112 7284 -189 6 1851 10417 125 19 8 chrX 165979461 165981955 -668341 + L1_Mus4 LINE L1 4104 6634 -2 6 1851 22 0 0 0 chrX 165982354 165982376 -667920 + AT_rich Low_complexity Low_complexity 1 22 0 6 1851 491 277 40 13 chrX 165982395 165982545 -667751 + MER58A DNA MER1_type 70 223 -1 6 1851 364 227 0 39 chrX 165983382 165983460 -666836 - B3 SINE B2 -141 75 1 6 1851 204 200 50 83 chrX 165983672 165983732 -666564 + L4 LINE RTE 1964 2021 -8 6 1851 728 179 22 0 chrX 165983917 165984051 -666245 + B1_Mur4 SINE Alu 2 138 -12 6 1851 935 48 8 0 chrX 165984051 165984176 -666120 + (GAAA)n Simple_repeat Simple_repeat 2 127 0 6 1851 1503 168 95 46 chrX 165984276 165984582 -665714 - ORR1A4 LTR MaLR -8 321 1 6 1851 24 0 0 0 chrX 165985411 165985435 -664861 + AT_rich Low_complexity Low_complexity 1 24 0 6 1851 32 26 0 0 chrX 165985683 165985722 -664574 + AT_rich Low_complexity Low_complexity 1 39 0 6 1851 242 218 33 44 chrX 165986007 165986098 -664198 - Lx7 LINE L1 -2 7694 7605 6 1851 22 0 0 0 chrX 165986197 165986219 -664077 + AT_rich Low_complexity Low_complexity 1 22 0 6 1851 2023 291 15 4 chrX 165986219 165986739 -663557 - Lx6 LINE L1 -169 7291 6766 6 1851 648 38 0 0 chrX 165986751 165986830 -663466 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 6 1851 5102 216 36 22 chrX 165986833 165987336 -662960 - Lx6 LINE L1 -709 6751 6224 6 1851 3128 41 8 5 chrX 165987336 165987728 -662568 + MTA_Mm LTR MaLR 4 396 0 6 1851 5102 187 72 61 chrX 165987728 165988484 -661812 - Lx6 LINE L1 -1237 6223 5513 6 1851 3055 81 2 5 chrX 165988484 165988904 -661392 - BGLII LTR ERVK -2 419 1 6 1851 4132 163 102 95 chrX 165988904 165989519 -660777 - Lx6 LINE L1 -368 5512 4849 6 1851 1155 62 7 0 chrX 165990615 165990761 -659535 + B1_Mm SINE Alu 1 147 0 6 1851 213 65 0 0 chrX 165990765 165990796 -659500 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1851 287 320 36 43 chrX 165992422 165992601 -657695 + MIR3 SINE MIR 1 173 -35 6 1851 546 317 18 63 chrX 165993361 165993583 -656713 - MER20 DNA MER1_type -7 212 1 6 1851 270 56 0 0 chrX 165994209 165994245 -656051 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1851 201 358 42 0 chrX 165994251 165994346 -655950 - L2 LINE L2 -663 2756 2658 6 1851 883 314 105 23 chrX 165994527 165994702 -655594 + ORR1D2 LTR MaLR 1 184 -186 6 1851 1164 177 131 146 chrX 165994702 165994912 -655384 + ORR1C2 LTR MaLR 1 189 -195 6 1851 381 43 0 0 chrX 165994912 165994959 -655337 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 1851 1164 177 131 146 chrX 165994959 165995082 -655214 + ORR1C2 LTR MaLR 190 345 -39 6 1851 1235 122 11 0 chrX 165995082 165995270 -655026 + B2_Mm1t SINE B2 2 191 -2 6 1851 1164 177 131 146 chrX 165995270 165995325 -654971 + ORR1C2 LTR MaLR 346 383 -1 6 1851 883 314 105 23 chrX 165995325 165995491 -654805 + ORR1D2 LTR MaLR 185 370 0 6 1851 270 421 0 0 chrX 165995504 165995599 -654697 + PB1 SINE Alu 1 95 -32 6 1851 293 203 0 0 chrX 165996100 165996164 -654132 - Lx5 LINE L1 -3 7047 6984 6 1851 2772 201 25 20 chrX 165996242 165996831 -653465 - Lx5 LINE L1 -647 6403 5812 6 1851 223 359 93 40 chrX 165997201 165997352 -652944 - L2 LINE L2 -1492 1927 1769 6 1851 250 67 44 0 chrX 165998035 165998080 -652216 + (TTTCC)n Simple_repeat Simple_repeat 3 49 0 6 1851 23 0 0 0 chrX 165998575 165998598 -651698 + AT_rich Low_complexity Low_complexity 1 23 0 6 1851 1468 91 0 0 chrX 165999051 165999250 -651046 + MTB LTR MaLR 1 199 -201 6 1851 1890 65 0 0 chrX 165999247 165999493 -650803 + MTB LTR MaLR 101 346 -54 6 1851 400 356 122 7 chrX 166001617 166001764 -648532 - RSINE1 SINE B4 0 165 2 1 1851 349 296 0 0 chrX 166001786 166001874 -648422 - B1F SINE Alu -40 109 22 2 1851 1086 255 84 33 chrX 166002178 166002631 -647665 + L1MB7 LINE L1 5694 6171 -13 3 1851 455 256 67 28 chrX 166002988 166003163 -647133 + MLT1A LTR MaLR 7 195 -195 4 1851 820 325 30 0 chrX 166003348 166003616 -646680 + MER99 DNA hAT? 481 756 -75 5 1851 279 350 25 0 chrX 166003633 166003713 -646583 + ID2 SINE ID 2 83 0 6 1851 396 374 57 26 chrX 166003969 166004161 -646135 + LTR16B2 LTR ERVL 18 215 -247 7 1851 1898 133 27 0 chrX 166004419 166004719 -645577 - ORR1A2 LTR MaLR -19 308 1 8 1851 1262 234 48 6 chrX 166006106 166006431 -643865 - Lx5 LINE L1 0 7058 6673 9 1851 467 186 0 0 chrX 166006420 166006506 -643790 + Lx4B LINE L1 6591 6676 -382 1 1851 628 280 73 17 chrX 166006547 166006725 -643571 + ID_B1 SINE B4 29 216 -8 1 1851 23 0 0 0 chrX 166007070 166007093 -643203 + AT_rich Low_complexity Low_complexity 1 23 0 1 1851 1400 249 43 7 chrX 166007094 166007397 -642899 - Lx5 LINE L1 -13 7037 6724 1 1851 234 415 43 0 chrX 166008489 166008583 -641713 + MER91C DNA Tip100 39 136 -4 1 1851 237 231 19 0 chrX 166008906 166008958 -641338 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1851 594 153 0 0 chrX 166009034 166009145 -641151 + (CA)n Simple_repeat Simple_repeat 2 112 0 1 1851 25 31 0 0 chrX 166009148 166009180 -641116 + AT_rich Low_complexity Low_complexity 1 32 0 1 1851 280 293 0 0 chrX 166009778 166009860 -640436 - RMER1C Other Other -13 1329 1248 1 1851 408 263 301 19 chrX 166009792 166010048 -640248 - Lx8 LINE L1 -5 7468 7141 1 1851 7441 45 6 15 chrX 166010061 166010079 -640217 - L1Md_F2 LINE L1 0 6582 6571 2 1851 4597 47 5 7 chrX 166010079 166010656 -639640 - L1Md_F2 LINE L1 -2 6580 6005 2 1851 7441 45 6 15 chrX 166010656 166011577 -638719 - L1Md_F2 LINE L1 -12 6570 5651 2 1851 484 298 84 50 chrX 166011894 166012155 -638141 - Lx8 LINE L1 -5 7468 7199 2 1851 261 0 0 0 chrX 166012323 166012352 -637944 + (TC)n Simple_repeat Simple_repeat 2 30 0 2 1851 405 58 0 0 chrX 166012352 166012403 -637893 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 1851 471 293 99 0 chrX 166012661 166012842 -637454 + MER3 DNA MER1_type 1 199 -10 2 1851 312 321 106 28 chrX 166013764 166013905 -636391 - MER5A DNA MER1_type -31 158 7 2 1851 698 303 73 22 chrX 166013983 166014256 -636040 + B4 SINE B4 4 290 -2 2 1851 381 43 0 0 chrX 166015664 166015711 -634585 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2 1851 842 241 67 0 chrX 166016412 166016441 -633855 - B3 SINE B2 -8 208 180 2 1851 249 33 0 0 chrX 166016441 166016471 -633825 + (TATG)n Simple_repeat Simple_repeat 2 31 0 3 1851 842 241 67 0 chrX 166016471 166016636 -633660 - B3 SINE B2 -37 179 2 2 1851 3477 137 81 8 chrX 166017340 166017547 -632749 + Lx5 LINE L1 5205 5436 -441 3 1851 189 0 0 0 chrX 166017547 166017568 -632728 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 3 1851 4256 177 65 25 chrX 166017568 166019103 -631193 + Lx5 LINE L1 5437 7050 0 3 1851 3623 43 67 0 chrX 166019119 166019564 -630732 - MT2C_Mm LTR ERVL 0 475 1 3 1851 266 287 19 19 chrX 166019595 166019698 -630598 + HAL1 LINE L1 1527 1629 -878 3 1851 3648 153 62 2 chrX 166020285 166020915 -629381 - Lx4A LINE L1 -1 7057 6390 3 1851 4530 143 84 28 chrX 166020928 166022036 -628260 - L1_Mur2 LINE L1 -4296 1581 425 3 1851 254 327 0 0 chrX 166022265 166022320 -627976 + ID4_ SINE ID 3 57 -26 3 1851 259 272 44 11 chrX 166022746 166022855 -627441 + B3A SINE B2 3 117 -78 3 1851 2499 122 44 3 chrX 166022855 166023242 -627054 + MusHAL1 LINE L1 71 473 -2881 3 1851 783 224 38 16 chrX 166023244 166023430 -626866 + B3 SINE B2 27 216 0 3 1851 405 153 58 25 chrX 166024144 166024265 -626031 - Lx9 LINE L1 -3 7641 7517 4 1851 385 197 79 0 chrX 166024265 166024341 -625955 - Lx9 LINE L1 -406 7238 7157 4 1851 197 43 62 21 chrX 166024612 166024660 -625636 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 4 1851 3815 57 0 2 chrX 166024765 166025244 -625052 + L1_Mus1 LINE L1 6090 6567 0 4 1851 1882 253 93 43 chrX 166025711 166026311 -623985 + Lx8 LINE L1 6822 7451 -22 4 1851 347 0 23 0 chrX 166026375 166026418 -623878 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1851 342 0 0 0 chrX 166026418 166026455 -623841 + (GA)n Simple_repeat Simple_repeat 1 38 0 4 1851 225 128 0 0 chrX 166027118 166027165 -623131 + (T)n Simple_repeat Simple_repeat 1 47 0 4 1851 9734 37 1 5 chrX 166027698 166029579 -620717 - L1Md_F2 LINE L1 0 6582 4713 4 1851 258 32 0 0 chrX 166030134 166030165 -620131 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1851 1947 171 43 23 chrX 166030355 166030707 -619589 - ORR1B2 LTR MaLR -8 359 1 4 1851 210 37 0 0 chrX 166031206 166031233 -619063 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1851 839 230 29 14 chrX 166031373 166031580 -618716 - B3 SINE B2 -6 210 1 5 1851 284 228 143 75 chrX 166031585 166031605 -618691 + L1M3 LINE L1 4845 4861 -1279 5 1851 3121 70 12 2 chrX 166031605 166032022 -618274 - BGLII LTR ERVK 0 421 1 5 1851 284 228 143 75 chrX 166032022 166032134 -618162 + L1M3 LINE L1 4862 4986 -1154 5 1851 888 19 0 0 chrX 166032250 166032356 -617940 + (TG)n Simple_repeat Simple_repeat 2 107 0 5 1851 297 207 0 140 chrX 166032492 166032537 -617759 - RMER12 LTR ERVK -2 1320 1285 5 1851 3693 56 0 0 chrX 166032537 166032984 -617312 + LTRIS5 LTR ERV1 1 447 0 5 1851 297 207 0 140 chrX 166032984 166033045 -617251 - RMER12 LTR ERVK -38 1284 1229 5 1851 3533 53 0 21 chrX 166033072 166033538 -616758 - L1Md_F2 LINE L1 -23 6559 6104 5 1851 3251 110 64 17 chrX 166033762 166034291 -616005 - Lx LINE L1 -7 6647 6094 5 1851 1800 158 9 33 chrX 166034827 166035190 -615106 - L1_Mur2 LINE L1 -697 5465 5077 5 1851 1653 202 9 6 chrX 166035170 166035499 -614797 + Lx5 LINE L1 6670 6999 -51 6 1851 438 175 19 19 chrX 166035497 166035602 -614694 + Lx4B LINE L1 6915 7019 -39 6 1851 438 175 19 19 chrX 166035601 166035706 -614590 + Lx4B LINE L1 6915 7019 -39 6 1851 426 184 19 19 chrX 166035705 166035810 -614486 + Lx4B LINE L1 6915 7019 -39 6 1851 438 175 19 19 chrX 166035809 166035914 -614382 + Lx4B LINE L1 6915 7019 -39 6 1851 422 186 19 19 chrX 166035914 166036018 -614278 + Lx4B LINE L1 6916 7019 -39 6 1851 529 218 61 7 chrX 166036017 166036165 -614131 + Lx5 LINE L1 6892 7047 -3 6 1851 189 0 0 0 chrX 166036458 166036479 -613817 + (TA)n Simple_repeat Simple_repeat 1 21 0 6 1851 1029 276 89 30 chrX 166036574 166037048 -613248 + L1M3 LINE L1 3735 4236 -1904 6 1851 278 349 158 39 chrX 166038262 166038572 -611724 + L2a LINE L2 1920 2266 -1153 6 1851 21 0 0 0 chrX 166038718 166038739 -611557 + AT_rich Low_complexity Low_complexity 1 21 0 6 1851 451 349 172 27 chrX 166038841 166039253 -611043 + L2a LINE L2 2946 3417 -9 6 1851 243 0 0 0 chrX 166039275 166039302 -610994 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1851 12973 92 8 11 chrX 166039332 166041890 -608406 - L1_Mus2 LINE L1 0 6566 4015 6 1851 1132 198 28 17 chrX 166041857 166042157 -608139 - L1Md_F LINE L1 -5699 920 486 6 1851 319 314 18 54 chrX 166043356 166043467 -606829 - ID_B1 SINE B4 -116 108 2 7 1851 430 321 72 12 chrX 166043574 166043741 -606555 + MER20 DNA MER1_type 16 192 -27 7 1851 2605 44 6 0 chrX 166043796 166044117 -606179 - L1Md_F2 LINE L1 -12 6570 6248 7 1851 401 308 39 0 chrX 166044120 166044250 -606046 + B1F2 SINE Alu 5 139 -10 7 1851 3039 129 71 14 chrX 166044250 166044744 -605552 + Lx3C LINE L1 6455 6976 0 7 1851 235 100 39 39 chrX 166044784 166044836 -605460 + A-rich Low_complexity Low_complexity 2 53 0 7 1851 3682 170 50 16 chrX 166044839 166045519 -604777 + Lx5 LINE L1 5783 6485 -565 7 1851 308 258 0 83 chrX 166047850 166047922 -602374 - ID4 SINE ID -6 77 12 7 1851 383 68 17 0 chrX 166048279 166048338 -601958 + (CA)n Simple_repeat Simple_repeat 1 60 0 7 1851 21 36 0 0 chrX 166048346 166048374 -601922 + AT_rich Low_complexity Low_complexity 1 28 0 7 1851 427 309 67 5 chrX 166048434 166048629 -601667 + L1M5 LINE L1 5479 5685 -494 8 1851 715 304 123 6 chrX 166048962 166049442 -600854 + L1MA7 LINE L1 4358 4896 -1250 8 1851 375 337 7 20 chrX 166049556 166049773 -600523 + L1MA7 LINE L1 5768 5985 -171 8 1851 25 31 0 0 chrX 166049922 166049954 -600342 + AT_rich Low_complexity Low_complexity 1 32 0 8 1851 227 106 64 0 chrX 166050524 166050571 -599725 + A-rich Low_complexity Low_complexity 2 51 0 8 1851 259 342 0 0 chrX 166050755 166050828 -599468 + MIR SINE MIR 24 96 -112 8 1851 273 361 0 0 chrX 166051453 166051525 -598771 + ID4_ SINE ID 5 76 -7 8 1851 954 289 69 9 chrX 166054065 166054484 -595812 + L1MC4a LINE L1 7237 7680 -202 8 1851 261 380 45 37 chrX 166054572 166054706 -595590 - 7SK RNA RNA -145 186 52 8 1851 499 233 10 10 chrX 166057489 166057593 -592703 + B1_Mm SINE Alu 34 137 -10 8 1851 5934 132 31 24 chrX 166057716 166058756 -591540 + Lx3C LINE L1 5930 6976 0 8 1851 7644 61 7 8 chrX 166058923 166060004 -590292 - L1Md_F2 LINE L1 -11 6571 5491 9 1851 3314 73 0 0 chrX 166060005 166060456 -589840 + L1_Mm LINE L1 3987 4437 -1446 9 1851 33902 82 9 8 chrX 166060458 166066638 -583658 + L1_Mus2 LINE L1 381 6565 -1 9 1851 29 0 0 0 chrX 166066638 166066667 -583629 + AT_rich Low_complexity Low_complexity 1 29 0 9 1851 1531 255 18 8 chrX 166066670 166067069 -583227 - Lx9 LINE L1 -695 6949 6547 9 1851 2367 211 35 27 chrX 166067066 166067725 -582571 - L1_Rod LINE L1 -597 5250 4587 9 1851 252 86 0 0 chrX 166067730 166067765 -582531 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 9 231 5825 151 43 4 chrX 166067768 166068791 -581505 - Lx4A LINE L1 -8 7050 5988 9 1852 8820 94 14 28 chrX 166068793 166070818 -579478 - Lx3A LINE L1 -87 6894 4898 9 1852 4060 58 4 2 chrX 166070818 166071320 -578976 - RLTR1C LTR ERV1 0 503 1 9 1852 7409 87 3 50 chrX 166071320 166071392 -578904 - Lx3A LINE L1 -989 4897 4826 9 1852 1502 84 53 0 chrX 166071387 166071613 -578683 + Lx3A LINE L1 4571 4808 -1078 9 1852 405 0 0 0 chrX 166071613 166071658 -578638 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1852 8255 124 17 13 chrX 166071679 166073047 -577249 - L1_Mur2 LINE L1 -425 5452 4080 1 1852 515 16 16 0 chrX 166073050 166073114 -577182 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 1852 286 260 104 0 chrX 166073115 166073192 -577104 - B4A SINE B4 -22 270 186 1 1852 297 216 48 58 chrX 166073465 166073568 -576728 - MTEb LTR MaLR 0 379 278 1 1852 282 247 23 12 chrX 166073670 166073756 -576540 + GA-rich Low_complexity Low_complexity 3 89 0 1 1852 22 0 0 0 chrX 166073951 166073973 -576323 + AT_rich Low_complexity Low_complexity 1 22 0 1 1852 580 322 65 50 chrX 166073979 166074564 -575732 - L1M4 LINE L1 -1801 4345 3752 1 1852 21 0 0 0 chrX 166075746 166075767 -574529 + AT_rich Low_complexity Low_complexity 1 21 0 1 1852 3172 231 42 8 chrX 166075862 166076601 -573695 + Lx9 LINE L1 6600 7363 -281 1 1852 279 175 32 0 chrX 166076598 166076661 -573635 + Lx9 LINE L1 7548 7612 -32 1 1852 1049 272 109 25 chrX 166076718 166077680 -572616 + L1MA4 LINE L1 4888 5930 -370 1 1852 23 0 0 0 chrX 166077684 166077707 -572589 + AT_rich Low_complexity Low_complexity 1 23 0 1 1852 1884 168 15 138 chrX 166077789 166078251 -572045 + MTC LTR MaLR 16 420 -1 1 1852 198 0 0 0 chrX 166078618 166078640 -571656 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1 1852 1122 63 7 0 chrX 166078642 166078784 -571512 - B1_Mus2 SINE Alu 0 147 5 1 1852 387 280 65 0 chrX 166079405 166079512 -570784 + MER81 DNA AcHobo 1 114 0 1 1852 288 0 0 0 chrX 166079873 166079905 -570391 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 1852 21 0 0 0 chrX 166080206 166080227 -570069 + AT_rich Low_complexity Low_complexity 1 21 0 1 1852 369 0 0 0 chrX 166080300 166080341 -569955 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1852 540 30 0 0 chrX 166080341 166080406 -569890 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 1852 204 156 0 62 chrX 166080409 166080457 -569839 + A-rich Low_complexity Low_complexity 1 45 0 1 1852 413 323 0 0 chrX 166080506 166080636 -569660 - Lx7 LINE L1 -423 7273 7144 1 1852 3494 124 3 38 chrX 166081019 166081646 -568650 - RMER17A2 LTR ERVK 0 906 302 1 1852 7907 95 4 2 chrX 166081646 166082850 -567446 - L1_Mus1 LINE L1 -643 5923 4716 1 1852 4972 73 0 0 chrX 166082850 166083491 -566805 + L1_Mus1 LINE L1 5927 6567 0 1 1852 1852 108 73 13 chrX 166083495 166083795 -566501 - RMER17A2 LTR ERVK -588 318 1 1 1852 278 327 151 26 chrX 166084021 166084195 -566101 + MIRb SINE MIR 6 210 -58 1 1852 1802 175 42 60 chrX 166084195 166084596 -565700 - ORR1B1 LTR MaLR 0 394 1 1 1852 278 326 156 28 chrX 166084596 166084609 -565687 + MIRb SINE MIR 211 222 -46 1 1852 4391 87 20 14 chrX 166084789 166085428 -564868 - L1_Mus3 LINE L1 0 6638 5996 1 1852 300 68 0 0 chrX 166085429 166085473 -564823 - L1_Mur3 LINE L1 -1289 4591 4548 1 1852 324 0 0 0 chrX 166085727 166085763 -564533 + (TC)n Simple_repeat Simple_repeat 1 36 0 1 1852 432 0 0 0 chrX 166085763 166085810 -564486 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1852 251 301 26 117 chrX 166086048 166086202 -564094 + B4 SINE B4 2 141 -151 1 1852 185 0 0 39 chrX 166086282 166086308 -563988 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1 1852 750 94 111 0 chrX 166086308 166086425 -563871 - B1_Mus2 SINE Alu -13 134 5 1 1852 306 0 0 0 chrX 166086465 166086499 -563797 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1852 315 0 0 0 chrX 166086499 166086533 -563763 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 1852 24 0 0 0 chrX 166086917 166086941 -563355 + AT_rich Low_complexity Low_complexity 1 24 0 1 1852 231 316 104 67 chrX 166087592 166087860 -562436 - RMER2 LTR ERV1 0 567 290 1 1852 820 245 14 19 chrX 166088178 166088386 -561910 - B3 SINE B2 -7 209 3 1 1852 441 0 0 0 chrX 166088930 166088979 -561317 + (TTA)n Simple_repeat Simple_repeat 3 51 0 1 1852 1002 267 5 18 chrX 166089191 166089412 -560884 + ID_B1 SINE B4 1 218 -6 1 1852 180 97 0 0 chrX 166090287 166090318 -559978 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 1 1852 527 316 87 26 chrX 166090362 166090557 -559739 - B4A SINE B4 -70 222 16 1 1852 23 33 0 0 chrX 166090620 166090650 -559646 + AT_rich Low_complexity Low_complexity 1 30 0 1 1852 726 44 0 0 chrX 166090761 166090851 -559445 + (TC)n Simple_repeat Simple_repeat 1 90 0 1 1852 315 146 0 0 chrX 166091358 166091406 -558890 - MTE2b LTR MaLR -35 344 297 1 1852 604 295 70 30 chrX 166091430 166091629 -558667 - MTE2b LTR MaLR -163 216 10 1 1852 488 308 109 17 chrX 166092875 166093050 -557246 - LTR33 LTR ERVL 0 515 325 1 1852 673 265 14 7 chrX 166093391 166093539 -556757 + B3A SINE B2 3 151 -47 1 1852 423 0 0 0 chrX 166093541 166093588 -556708 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1852 610 175 72 105 chrX 166093650 166093803 -556493 - B1_Mur4 SINE Alu 0 150 3 1 1852 662 284 41 8 chrX 166094249 166094494 -555802 + L1MB7 LINE L1 5706 5958 -226 1 1852 949 183 61 52 chrX 166095921 166096134 -554162 - B3 SINE B2 -1 215 1 1 1852 914 310 54 14 chrX 166097010 166097452 -552844 - Lx8 LINE L1 -108 7365 6906 1 1852 392 276 93 17 chrX 166097584 166097702 -552594 - MLT1D LTR MaLR -361 144 18 1 1852 384 283 0 81 chrX 166097732 166097855 -552441 - MTE2b LTR MaLR -34 345 233 1 1852 775 235 155 56 chrX 166097865 166098117 -552179 - MTE2b LTR MaLR -102 277 1 1 1852 182 322 133 27 chrX 166098190 166098378 -551918 + L4 LINE RTE 1743 1950 -79 1 1852 204 260 63 25 chrX 166098772 166098851 -551445 - MIRb SINE MIR -70 198 117 1 1852 266 330 115 10 chrX 166100059 166100163 -550133 - PB1D10 SINE Alu -2 115 1 1 1852 385 272 48 0 chrX 166100229 166100332 -549964 - MIRb SINE MIR -66 202 95 1 1852 426 345 23 35 chrX 166100342 166100417 -549879 + B4 SINE B4 1 75 -217 1 1852 536 0 0 15 chrX 166100417 166100482 -549814 + (TTTC)n Simple_repeat Simple_repeat 3 66 0 1 1852 426 345 23 35 chrX 166100482 166100580 -549716 + B4 SINE B4 76 172 -120 1 1852 299 279 40 80 chrX 166100601 166100776 -549520 - Lx5 LINE L1 -6 7044 6877 1 1852 19697 124 65 2 chrX 166100816 166102738 -547558 - L1_Mus1 LINE L1 -7 6560 4653 1 1852 3058 64 18 0 chrX 166102738 166103127 -547169 + MTA_Mm LTR MaLR 1 396 0 1 1852 19697 166 118 6 chrX 166103127 166106834 -543462 - L1_Mus1 LINE L1 -1234 4652 353 1 1852 3946 191 27 13 chrX 166106836 166107716 -542580 - Lx5 LINE L1 -623 6427 5530 1 1852 261 98 0 0 chrX 166107818 166107859 -542437 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1852 181 216 27 0 chrX 166108682 166108719 -541577 - MIR SINE MIR -138 70 33 1 1852 505 300 59 37 chrX 166109265 166109400 -540896 - RSINE1 SINE B4 -13 152 15 1 1852 369 338 4 82 chrX 166109410 166109642 -540654 + MER20 DNA MER1_type 2 215 -4 1 1852 215 253 51 0 chrX 166110502 166110581 -539715 + (TA)n Simple_repeat Simple_repeat 2 84 0 1 1852 277 286 0 0 chrX 166111211 166111274 -539022 - Tigger5 DNA MER2_type 0 2406 2344 1 1852 306 326 21 0 chrX 166111278 166111373 -538923 - Tigger5 DNA MER2_type -2144 262 166 1 1852 428 342 72 7 chrX 166111420 166111573 -538723 + B4A SINE B4 130 292 0 1 1852 351 0 0 0 chrX 166111646 166111685 -538611 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1852 364 328 24 0 chrX 166111705 166111830 -538466 - Tigger5 DNA MER2_type -2266 140 13 1 1852 846 285 56 52 chrX 166111872 166112372 -537924 - L1MD3 LINE L1 -12 7983 7482 1 1852 640 320 7 7 chrX 166112703 166112857 -537439 + RSINE1 SINE B4 12 165 0 1 1852 255 293 67 57 chrX 166112904 166113009 -537287 + PB1D10 SINE Alu 5 110 -7 1 1852 201 39 0 0 chrX 166113412 166113438 -536858 + (TTA)n Simple_repeat Simple_repeat 3 28 0 1 1852 1121 89 0 11 chrX 166113779 166113961 -536335 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 1852 292 130 29 0 chrX 166113970 166114039 -536257 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 1 1852 201 175 0 0 chrX 166114835 166114875 -535421 + T-rich Low_complexity Low_complexity 1 40 0 1 1852 843 316 8 24 chrX 166115094 166115347 -534949 - MLT1D LTR MaLR -9 496 248 1 1852 530 281 77 12 chrX 166115345 166115514 -534782 - MT2A LTR ERVL -74 459 280 1 1852 3366 195 27 20 chrX 166115762 166116462 -533834 - Lx2B LINE L1 -11 6989 6285 1 1852 3119 102 4 27 chrX 166116484 166116958 -533338 - Lx LINE L1 -4 6650 6188 1 1852 336 317 86 46 chrX 166117442 166117594 -532702 + MER20 DNA MER1_type 22 179 -40 1 1852 184 231 56 97 chrX 166117799 166117871 -532425 - L2 LINE L2 -3110 309 241 1 1852 225 0 0 0 chrX 166117927 166117952 -532344 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1852 431 311 92 22 chrX 166118668 166118852 -531444 + MER58A DNA MER1_type 28 224 0 1 1852 823 257 40 0 chrX 166118997 166119199 -531097 - B3 SINE B2 -6 210 1 1 1852 379 228 0 117 chrX 166119619 166119747 -530549 + MLT1I LTR MaLR 322 418 -30 1 1852 224 279 34 0 chrX 166120494 166120563 -529733 - MIRc SINE MIR -113 149 72 1 1852 209 390 0 0 chrX 166120631 166120708 -529588 + MIRb SINE MIR 15 91 -177 1 1852 238 333 67 16 chrX 166121695 166121852 -528444 + MIRc SINE MIR 28 196 -72 1 1852 207 0 0 0 chrX 166123061 166123084 -527212 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1852 245 49 73 0 chrX 166123548 166123589 -526707 + (TTTTG)n Simple_repeat Simple_repeat 4 47 0 1 1852 21 0 0 0 chrX 166124792 166124813 -525483 + AT_rich Low_complexity Low_complexity 1 21 0 1 1852 251 182 0 29 chrX 166125956 166126024 -524272 + CT-rich Low_complexity Low_complexity 2 67 0 1 1852 387 105 0 0 chrX 166126025 166126082 -524214 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 1852 218 330 62 80 chrX 166126241 166126353 -523943 - MIRm SINE MIR -1 275 166 1 1852 286 265 29 0 chrX 166126714 166126782 -523514 + ID SINE ID 5 74 -150 1 1852 265 316 21 35 chrX 166127919 166128060 -522236 - Kanga1d DNA Tc2 -116 493 355 1 1852 566 252 28 21 chrX 166131235 166131377 -518919 + RSINE1 SINE B4 2 144 -21 1 1852 468 91 0 0 chrX 166131423 166131489 -518807 + (CA)n Simple_repeat Simple_repeat 1 66 0 2 1852 563 0 15 0 chrX 166133040 166133107 -517189 + (GGAA)n Simple_repeat Simple_repeat 2 69 0 2 1852 226 344 188 0 chrX 166133571 166133667 -516629 - L2c LINE L2 0 3387 3274 2 1852 529 294 69 25 chrX 166133964 166134166 -516130 - B3 SINE B2 -4 212 2 2 1852 239 346 19 19 chrX 166134331 166134434 -515862 - MER5A1 DNA MER1_type -57 109 7 2 1852 189 0 0 0 chrX 166134984 166135005 -515291 + (GGAGA)n Simple_repeat Simple_repeat 2 22 0 2 1852 24 32 0 0 chrX 166135150 166135181 -515115 + AT_rich Low_complexity Low_complexity 1 31 0 2 1852 1277 252 58 107 chrX 166135235 166135924 -514372 + L1MD1 LINE L1 5588 6242 0 2 1852 638 296 0 13 chrX 166135931 166136085 -514211 + RSINE1 SINE B4 4 155 -10 2 1852 261 284 0 0 chrX 166136087 166136154 -514142 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1852 849 269 43 65 chrX 166136357 166136679 -513617 + MER58B DNA MER1_type 27 341 0 2 1852 23 0 0 0 chrX 166138011 166138034 -512262 + AT_rich Low_complexity Low_complexity 1 23 0 2 1852 491 399 70 31 chrX 166138587 166138970 -511326 + MLT1E2 LTR MaLR 226 623 -4 2 1852 857 323 41 26 chrX 166139398 166139815 -510481 + L1MCb LINE L1 3 425 -5620 2 1852 2142 224 96 14 chrX 166139843 166140013 -510283 - Lx4B LINE L1 -8 7050 6769 2 1852 456 19 0 0 chrX 166140013 166140066 -510230 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1852 2258 197 82 5 chrX 166140066 166140544 -509752 - Lx4B LINE L1 -204 6772 6252 2 1852 469 288 81 35 chrX 166140629 166140802 -509494 + L1MCb LINE L1 796 976 -5775 2 1852 624 289 168 6 chrX 166140812 166141164 -509132 + L1MCb LINE L1 704 1112 -4933 2 1852 745 305 76 76 chrX 166141170 166141647 -508649 - MLT1E1 LTR MaLR -38 616 13 2 1852 232 310 0 27 chrX 166142849 166142922 -507374 + ID4 SINE ID 2 72 -11 2 1852 2501 56 0 12 chrX 166143533 166143858 -506438 + L1_Mus2 LINE L1 6245 6565 -1 2 1852 1212 228 142 6 chrX 166144656 166144995 -505301 - MTD LTR MaLR -15 404 20 2 1852 493 264 9 0 chrX 166145035 166145145 -505151 - ORR1E LTR MaLR -247 112 2 2 1852 210 244 0 47 chrX 166145153 166145196 -505100 + ID4_ SINE ID 32 72 -11 2 1852 963 80 0 0 chrX 166145202 166145353 -504943 + (TC)n Simple_repeat Simple_repeat 1 151 0 2 1852 368 311 93 29 chrX 166146361 166146566 -503730 + MER20 DNA MER1_type 2 219 0 2 1852 223 311 126 45 chrX 166147433 166147544 -502752 - L2c LINE L2 0 3387 3268 2 1852 212 184 0 20 chrX 166147647 166147697 -502599 + GA-rich Low_complexity Low_complexity 6 54 0 2 1852 235 276 91 10 chrX 166148282 166148381 -501915 + MIRb SINE MIR 113 219 -49 2 1852 560 40 13 0 chrX 166148767 166148842 -501454 + (GA)n Simple_repeat Simple_repeat 2 77 0 2 1852 756 226 116 13 chrX 166148845 166149069 -501227 - L1MB7 LINE L1 -100 6084 5838 2 1852 707 313 14 14 chrX 166149397 166149611 -500685 + MER58A DNA MER1_type 11 224 0 2 1852 227 328 67 25 chrX 166150352 166150471 -499825 + L2c LINE L2 3256 3379 -8 2 1852 448 281 80 15 chrX 166150561 166150645 -499651 - B1F SINE Alu -1 148 56 2 1852 2019 127 39 9 chrX 166150645 166150978 -499318 - Lx LINE L1 0 6654 6312 2 1852 448 281 80 15 chrX 166150978 166151030 -499266 - B1F SINE Alu -94 55 4 2 1852 1077 97 7 0 chrX 166151676 166151821 -498475 + B1_Mus2 SINE Alu 1 146 -1 2 1852 1776 191 36 17 chrX 166151924 166152281 -498015 - MTB_Mm LTR MaLR -43 364 1 2 1852 300 237 119 0 chrX 166152718 166152836 -497460 - MER20 DNA MER1_type -1 218 87 2 1852 842 260 61 130 chrX 166152848 166153255 -497041 + MTE2a LTR MaLR 1 379 0 2 1852 1314 248 103 3 chrX 166153679 166154019 -496277 + MTEa LTR MaLR 1 374 -5 2 1852 224 302 102 23 chrX 166154190 166154278 -496018 + MIRb SINE MIR 120 214 -54 2 1852 22 94 0 0 chrX 166154360 166154424 -495872 + AT_rich Low_complexity Low_complexity 1 64 0 2 1852 333 0 0 0 chrX 166154461 166154498 -495798 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 1852 1039 229 24 24 chrX 166154554 166154800 -495496 - Lx9 LINE L1 -163 7481 7236 2 1852 473 47 16 0 chrX 166154903 166154967 -495329 + (TTGG)n Simple_repeat Simple_repeat 4 68 0 2 1852 428 288 71 9 chrX 166154981 166155093 -495203 - B1F SINE Alu -29 120 2 2 1852 2559 237 63 91 chrX 166155409 166156166 -494130 + RMER13A LTR ERVK 14 749 -111 2 1852 22 0 0 0 chrX 166156355 166156377 -493919 + AT_rich Low_complexity Low_complexity 1 22 0 2 1852 180 0 0 0 chrX 166157196 166157216 -493080 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 2 1852 398 311 41 0 chrX 166157933 166158055 -492241 - MER3 DNA MER1_type 0 209 83 2 1852 381 248 21 107 chrX 166158127 166158267 -492029 - MER5A1 DNA MER1_type -34 132 5 2 1852 498 150 0 0 chrX 166158518 166158638 -491658 + (TC)n Simple_repeat Simple_repeat 2 121 0 2 1852 297 261 78 22 chrX 166158861 166158951 -491345 - B4A SINE B4 -197 95 1 2 1852 230 357 81 6 chrX 166159259 166159431 -490865 - L2 LINE L2 -733 2686 2502 2 1852 309 131 0 0 chrX 166160124 166160185 -490111 + (TA)n Simple_repeat Simple_repeat 2 62 0 2 1852 465 66 0 0 chrX 166160267 166160328 -489968 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 1852 904 200 11 6 chrX 166160522 166160703 -489593 + Lx9 LINE L1 7204 7385 -259 2 1852 3075 223 27 11 chrX 166161137 166161776 -488520 - Lx5 LINE L1 -5 7045 6397 2 1852 270 56 0 0 chrX 166162327 166162363 -487933 + (TTTTC)n Simple_repeat Simple_repeat 5 40 0 2 1852 349 269 9 80 chrX 166163459 166163572 -486724 - ID_B1 SINE B4 -34 190 86 2 1852 278 272 118 66 chrX 166163996 166164224 -486072 - MamRep1161 DNA TcMar -500 457 218 2 1852 655 203 28 21 chrX 166165272 166165413 -484883 - L1M2 LINE L1 -520 5771 5630 2 1852 226 309 0 0 chrX 166165492 166165560 -484736 + L1MA5 LINE L1 6209 6276 -24 2 1852 500 306 14 68 chrX 166165709 166165773 -484523 - MER3 DNA MER1_type 0 209 154 2 1852 893 216 60 10 chrX 166165773 166165974 -484322 - B3 SINE B2 -2 214 4 2 1852 500 306 14 68 chrX 166165974 166166130 -484166 - MER3 DNA MER1_type -56 153 1 2 1852 871 342 30 55 chrX 166166236 166166593 -483703 - Lx9 LINE L1 -1 7472 7110 2 1852 5436 35 12 1 chrX 166166593 166167246 -483050 - L1Md_F2 LINE L1 0 6582 5923 2 1852 743 340 20 56 chrX 166167246 166167517 -482779 - Lx9 LINE L1 -402 7242 6989 2 1852 27 49 0 0 chrX 166167725 166167766 -482530 + AT_rich Low_complexity Low_complexity 1 41 0 2 1852 32 0 0 0 chrX 166168278 166168310 -481986 + AT_rich Low_complexity Low_complexity 1 32 0 2 1852 1847 134 3 130 chrX 166168757 166169134 -481162 - ORR1A4 LTR MaLR 0 329 1 2 1852 993 164 50 34 chrX 166169134 166169373 -480923 - ORR1A4-int LTR MaLR 0 1963 1764 2 1852 1831 244 80 72 chrX 166169385 166170268 -480028 - RMER17B LTR ERVK -9 899 1 2 1852 9729 141 33 66 chrX 166170268 166172149 -478147 - ORR1A4-int LTR MaLR -195 1768 1 2 1852 1830 124 120 25 chrX 166172151 166172501 -477795 - ORR1A4 LTR MaLR -2 392 42 2 1852 865 219 80 5 chrX 166172612 166172800 -477496 - B3 SINE B2 -10 206 5 2 1852 299 348 22 3 chrX 166172834 166172951 -477345 + PB1D10 SINE Alu 1 117 0 2 1852 246 105 0 0 chrX 166174511 166174549 -475747 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2 1852 25 51 0 0 chrX 166175842 166175881 -474415 + AT_rich Low_complexity Low_complexity 1 39 0 2 1852 1185 257 45 26 chrX 166176234 166176586 -473710 + Lx5 LINE L1 6687 7045 -5 2 1852 454 279 9 0 chrX 166177323 166177434 -472862 + PB1D10 SINE Alu 5 116 -1 2 1852 2472 177 41 8 chrX 166177546 166177635 -472661 - RLTR16 LTR ERVK 0 505 404 2 1852 360 0 0 0 chrX 166177635 166177675 -472621 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1852 2472 177 41 8 chrX 166177675 166178074 -472222 - RLTR16 LTR ERVK -102 403 2 2 1852 278 100 40 0 chrX 166178369 166178419 -471877 + (TATG)n Simple_repeat Simple_repeat 4 55 0 2 1852 404 271 236 0 chrX 166178420 166178564 -471732 - B3A SINE B2 -16 182 5 2 1852 33756 36 0 0 chrX 166178623 166183861 -466435 + L1Md_T LINE L1 254 5589 -297 2 1852 9043 5 0 0 chrX 166183861 166184857 -465439 + L1Md_T LINE L1 5590 6585 0 2 1852 246 358 24 24 chrX 166186183 166186306 -463990 + MER58B DNA MER1_type 219 341 0 2 1852 317 306 124 54 chrX 166186968 166187227 -463069 - B4A SINE B4 -14 278 2 2 1852 329 296 133 55 chrX 166187548 166187804 -462492 - MLT1H LTR MaLR -185 364 57 2 1852 2127 24 0 0 chrX 166187862 166188109 -462187 + L1Md_T LINE L1 6333 6579 -3 2 1852 183 156 0 0 chrX 166188203 166188235 -462061 + A-rich Low_complexity Low_complexity 1 32 0 2 1852 359 41 20 0 chrX 166190825 166190874 -459422 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 1852 1042 229 0 14 chrX 166191585 166191802 -458494 + B3 SINE B2 3 216 0 2 1852 526 303 7 0 chrX 166192204 166192346 -457950 + B1_Mur2 SINE Alu 1 143 -6 2 1852 339 318 32 0 chrX 166192451 166192577 -457719 + MER5A DNA MER1_type 10 139 -50 2 1852 6884 87 0 13 chrX 166192583 166192707 -457589 - L1_Mus1 LINE L1 -1 6566 6453 2 1852 1932 117 116 32 chrX 166192707 166193086 -457210 - RLTR10A LTR ERVK 0 411 1 2 1852 6884 78 1 8 chrX 166193086 166194589 -455707 - L1_Mus1 LINE L1 -115 6452 4956 2 1852 5033 67 0 0 chrX 166194580 166195262 -455034 + L1_Mus1 LINE L1 4236 4917 -966 2 1852 868 339 31 0 chrX 166195397 166195657 -454639 + B4A SINE B4 2 269 -23 2 1852 180 111 0 0 chrX 166195966 166195993 -454303 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1852 225 289 23 35 chrX 166196142 166196228 -454068 + MIR3 SINE MIR 117 201 -7 2 1852 918 214 70 15 chrX 166196691 166196890 -453406 + B3 SINE B2 6 215 -1 2 1852 795 211 21 2 chrX 166196981 166197157 -453139 - B3 SINE B2 -4 194 8 2 1852 2573 73 42 0 chrX 166197302 166197658 -452638 + L1_Mus3 LINE L1 6263 6633 -5 2 1852 510 31 0 0 chrX 166198689 166198753 -451543 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 1853 203 184 0 0 chrX 166201867 166201905 -448391 + T-rich Low_complexity Low_complexity 1 38 0 2 1853 325 284 11 11 chrX 166201988 166202077 -448219 - MER5A1 DNA MER1_type -54 112 24 3 1853 1200 85 18 6 chrX 166202206 166202372 -447924 - B2_Mm2 SINE B2 -27 168 1 3 1853 21 57 0 0 chrX 166203818 166203853 -446443 + AT_rich Low_complexity Low_complexity 1 35 0 3 1853 182 234 0 78 chrX 166205744 166205795 -444501 - MIRb SINE MIR -31 237 191 3 1853 267 79 0 0 chrX 166206196 166206234 -444062 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1853 187 345 59 33 chrX 166206333 166206486 -443810 - MIRb SINE MIR -83 185 29 3 1853 21 0 0 0 chrX 166208445 166208466 -441830 + AT_rich Low_complexity Low_complexity 1 21 0 3 1853 3952 34 2 2 chrX 166208479 166208949 -441347 - L1Md_F2 LINE L1 -3 6579 6110 3 1853 4918 27 5 8 chrX 166209363 166209952 -440344 - L1Md_F2 LINE L1 0 6582 5996 3 1853 278 354 10 0 chrX 166211238 166211334 -438962 - MIR SINE MIR -117 145 49 3 1853 190 250 133 40 chrX 166211503 166211578 -438718 + MIR SINE MIR 151 232 -30 3 1853 1667 201 79 38 chrX 166212266 166212711 -437585 - RLTR16 LTR ERVK -42 463 1 3 1853 526 172 222 7 chrX 166212932 166213067 -437229 - RMER1C Other Other -117 1225 1062 3 1853 225 94 0 0 chrX 166213211 166213243 -437053 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 3 1853 4839 72 8 12 chrX 166213376 166214025 -436271 + L1_Mus1 LINE L1 5922 6567 0 3 1853 3259 38 5 2 chrX 166215625 166216020 -434276 + MTA_Mm LTR MaLR 1 396 0 3 1853 2322 175 47 35 chrX 166216504 166217019 -433277 + RLTR28 LTR ERVL 1 521 -3 3 1853 2254 172 36 87 chrX 166217637 166218186 -432110 + RLTR28 LTR ERVL 1 521 -3 3 1853 1966 205 55 31 chrX 166218897 166219406 -430890 + RLTR28 LTR ERVL 1 521 -3 3 1853 2258 198 29 18 chrX 166220107 166220194 -430102 + RLTR28 LTR ERVL 1 88 -436 3 1853 405 0 0 0 chrX 166220194 166220239 -430057 + (CAAAA)n Simple_repeat Simple_repeat 3 47 0 3 1853 2258 198 29 18 chrX 166220239 166220666 -429630 + RLTR28 LTR ERVL 89 520 -4 3 1853 552 179 7 146 chrX 166221060 166221204 -429092 - B1_Mur1 SINE Alu -20 129 6 3 1853 223 267 26 13 chrX 166221226 166221302 -428994 + (TCTCTG)n Simple_repeat Simple_repeat 4 80 0 3 1853 767 158 0 0 chrX 166222131 166222258 -428038 - URR1B DNA MER1_type 0 225 99 3 1853 2015 69 27 0 chrX 166222258 166222520 -427776 + L1_Mus1 LINE L1 6295 6563 -4 3 1853 4023 40 16 8 chrX 166222602 166223242 -427054 - L1VL4 LINE L1 -2158 1401 761 3 1853 4166 52 2 2 chrX 166223242 166223763 -426533 - L1Md_F2 LINE L1 0 6582 6062 3 1853 2739 60 5 21 chrX 166223763 166223915 -426381 - L1VL4 LINE L1 -5542 760 607 3 1853 1497 209 41 12 chrX 166223912 166224232 -426064 + Lx LINE L1 6306 6634 -20 3 1853 567 180 312 0 chrX 166224249 166224377 -425919 + MTD LTR MaLR 201 368 -51 3 1853 33 0 0 0 chrX 166224378 166224411 -425885 + AT_rich Low_complexity Low_complexity 1 33 0 3 1853 606 28 0 0 chrX 166224422 166224494 -425802 + (GA)n Simple_repeat Simple_repeat 1 72 0 3 1853 2134 165 58 3 chrX 166224558 166224940 -425356 - MTC LTR MaLR 0 421 19 3 1853 203 81 54 0 chrX 166225403 166225440 -424856 + (CAAAA)n Simple_repeat Simple_repeat 1 39 0 3 1853 24 32 0 0 chrX 166225703 166225734 -424562 + AT_rich Low_complexity Low_complexity 1 31 0 3 1853 680 122 52 0 chrX 166225742 166225857 -424439 + B1_Mus2 SINE Alu 21 141 -6 3 1853 21 0 0 0 chrX 166225860 166225881 -424415 + AT_rich Low_complexity Low_complexity 1 21 0 3 1853 377 231 76 17 chrX 166226312 166226431 -423865 - L1ME2 LINE L1 -30 6134 6009 3 1853 336 301 198 27 chrX 166226458 166226792 -423504 - L1ME2 LINE L1 -417 5747 5357 3 1853 369 242 37 75 chrX 166226885 166226992 -423304 - B3A SINE B2 -88 110 8 3 1853 791 320 68 44 chrX 166227012 166227216 -423080 - L1ME2 LINE L1 -2136 4010 3811 3 1853 3464 168 63 20 chrX 166227216 166227878 -422418 - RLTR17 LTR ERVK 0 692 2 3 1853 791 320 68 44 chrX 166227878 166228142 -422154 - L1ME2 LINE L1 -2336 3810 3532 3 1853 366 162 0 0 chrX 166228142 166228216 -422080 - Lx9 LINE L1 -2 7642 7569 3 1853 791 320 68 44 chrX 166228216 166228515 -421781 - L1ME2 LINE L1 -2615 3531 3226 3 1853 1303 61 21 32 chrX 166228542 166228729 -421567 - B2_Mm2 SINE B2 -9 186 2 3 1853 23 0 0 0 chrX 166228750 166228773 -421523 + AT_rich Low_complexity Low_complexity 1 23 0 3 1853 230 257 52 91 chrX 166228814 166228891 -421405 - RSINE1 SINE B4 -19 146 73 3 1853 479 275 48 36 chrX 166228951 166229260 -421036 - L1MC LINE L1 -3009 3137 2825 3 1853 254 197 16 16 chrX 166229281 166229343 -420953 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 1853 226 109 84 23 chrX 166230012 166230143 -420153 + (TA)n Simple_repeat Simple_repeat 1 139 0 3 1853 25 102 0 0 chrX 166230143 166230231 -420065 + AT_rich Low_complexity Low_complexity 1 88 0 3 1853 197 180 20 0 chrX 166230245 166230295 -420001 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 3 1853 21 0 0 0 chrX 166230703 166230724 -419572 + AT_rich Low_complexity Low_complexity 1 21 0 3 1853 24 53 0 0 chrX 166230763 166230801 -419495 + AT_rich Low_complexity Low_complexity 1 38 0 3 1853 228 219 12 47 chrX 166232149 166232235 -418061 + (TAAA)n Simple_repeat Simple_repeat 2 84 0 3 1853 310 274 77 33 chrX 166232466 166232647 -417649 - MER5A DNA MER1_type 0 189 1 3 1853 871 284 54 29 chrX 166233803 166234082 -416214 + B4A SINE B4 2 287 -5 3 1853 342 0 0 0 chrX 166234096 166234134 -416162 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1853 326 313 41 76 chrX 166234398 166234593 -415703 + B3A SINE B2 4 202 -14 3 1853 24 0 0 29 chrX 166234689 166234702 -415594 + AT_rich Low_complexity Low_complexity 1 13 0 3 1853 320 296 133 31 chrX 166234702 166234897 -415399 - B3 SINE B2 -1 215 1 3 1853 24 0 0 29 chrX 166234897 166234918 -415378 + AT_rich Low_complexity Low_complexity 1 21 0 3 1853 323 350 78 28 chrX 166235963 166236104 -414192 - MER45A DNA Tip100 -10 168 21 3 1853 25 0 0 0 chrX 166237112 166237137 -413159 + GC_rich Low_complexity Low_complexity 1 25 0 3 1853 21 0 0 0 chrX 166237653 166237674 -412622 + AT_rich Low_complexity Low_complexity 1 21 0 3 1853 568 286 24 0 chrX 166239054 166239180 -411116 - RSINE1 SINE B4 -33 132 4 3 1853 256 355 0 78 chrX 166239334 166239450 -410846 - MER5A DNA MER1_type -82 107 1 3 1853 539 338 42 47 chrX 166239694 166239908 -410388 - MER20 DNA MER1_type 0 219 7 3 1853 212 203 112 138 chrX 166240316 166240396 -409900 + PB1D10 SINE Alu 40 117 0 3 1853 315 301 162 60 chrX 166241173 166241438 -408858 + L1M5 LINE L1 5532 5823 -301 3 1853 324 0 0 0 chrX 166241900 166241936 -408360 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1853 861 38 0 0 chrX 166242899 166243004 -407292 + (TAGA)n Simple_repeat Simple_repeat 1 105 0 3 1853 216 0 0 0 chrX 166243046 166243070 -407226 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 3 1853 474 18 0 0 chrX 166243194 166243249 -407047 + (CATA)n Simple_repeat Simple_repeat 2 56 0 3 1853 206 313 83 12 chrX 166245104 166245188 -405108 - MIRb SINE MIR -52 216 127 3 1853 462 79 0 0 chrX 166245210 166245273 -405023 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1853 1207 109 16 0 chrX 166245320 166245503 -404793 + B2_Mm2 SINE B2 1 186 -9 3 1853 252 0 0 0 chrX 166245670 166245698 -404598 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1853 302 292 69 55 chrX 166247842 166247987 -402309 - MLT1A LTR MaLR -193 181 35 3 1853 282 29 0 0 chrX 166250196 166250231 -400065 + (TATG)n Simple_repeat Simple_repeat 2 36 0 3 1853 645 291 31 25 chrX 166250245 166250407 -399889 - RSINE1 SINE B4 0 165 3 3 1853 696 308 64 33 chrX 166250823 166251216 -399080 - Lx9 LINE L1 -119 7525 7121 3 1853 250 250 29 14 chrX 166251702 166251771 -398525 + MER20 DNA MER1_type 88 157 -62 3 1853 257 310 45 45 chrX 166252596 166252684 -397612 - B1F SINE Alu -55 94 7 3 1853 850 256 35 0 chrX 166253201 166253404 -396892 - B3 SINE B2 -6 210 1 3 1853 605 332 9 60 chrX 166253876 166254094 -396202 - MER58A DNA MER1_type -16 208 2 3 1853 620 167 0 9 chrX 166254525 166254627 -395669 + B1_Mus2 SINE Alu 35 136 -11 3 1853 258 32 0 0 chrX 166254627 166254658 -395638 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1853 255 178 22 0 chrX 166255412 166255457 -394839 + PB1D10 SINE Alu 65 110 -7 3 1853 1025 133 0 11 chrX 166255458 166255640 -394656 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1853 275 371 17 33 chrX 166255843 166255963 -394333 + B4 SINE B4 63 180 -112 3 1853 402 244 0 0 chrX 166255883 166255965 -394331 + B1_Mus2 SINE Alu 14 95 -52 3 1853 262 151 0 70 chrX 166255991 166256048 -394248 - B1_Mus2 SINE Alu 0 147 95 3 1853 1189 104 0 47 chrX 166256065 166256224 -394072 + B2_Mm2 SINE B2 1 159 -36 3 1853 333 0 0 0 chrX 166256224 166256261 -394035 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 3 1853 1189 104 0 47 chrX 166256261 166256293 -394003 + B2_Mm2 SINE B2 160 183 -12 3 1853 274 238 138 0 chrX 166256446 166256526 -393770 + PB1 SINE Alu 35 125 -2 3 1853 278 267 12 96 chrX 166256536 166256619 -393677 + ID4_ SINE ID 2 77 -6 3 1853 207 0 0 0 chrX 166256719 166256742 -393554 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1853 1221 27 0 7 chrX 166256742 166256878 -393418 - B1_Mm SINE Alu -11 136 1 3 1853 465 288 37 1 chrX 166256889 166257046 -393250 + Lx9 LINE L1 7050 7342 -302 3 1853 210 105 0 0 chrX 166257342 166257380 -392916 + (TC)n Simple_repeat Simple_repeat 1 38 0 3 1853 240 35 0 0 chrX 166257380 166257409 -392887 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1853 539 158 181 17 chrX 166258172 166258288 -392008 + B1_Mus1 SINE Alu 5 139 -9 3 1853 400 315 0 9 chrX 166258532 166258641 -391655 - PB1D10 SINE Alu -1 116 9 3 1853 794 199 7 0 chrX 166258984 166259130 -391166 + B1_Mm SINE Alu 1 147 0 4 1853 894 299 46 11 chrX 166259433 166259714 -390582 - B4A SINE B4 0 292 2 4 1853 602 328 71 38 chrX 166259837 166260306 -389990 + MLT1G1 LTR MaLR 11 569 -10 4 1853 994 94 0 0 chrX 166260424 166260562 -389734 - B1_Mus2 SINE Alu -2 145 8 4 1853 423 316 0 73 chrX 166260796 166260890 -389406 + B4A SINE B4 2 128 -164 4 1853 1734 169 43 6 chrX 166260890 166261236 -389060 + RLTR15 LTR ERVK 1 359 0 4 1853 423 372 32 32 chrX 166261236 166261400 -388896 + B4A SINE B4 129 290 -2 4 1853 240 284 12 24 chrX 166261408 166261491 -388805 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 4 1853 456 192 40 10 chrX 166262298 166262398 -387898 - ID_B1 SINE B4 -38 186 84 4 1853 25 31 0 0 chrX 166262589 166262621 -387675 + AT_rich Low_complexity Low_complexity 1 32 0 4 1853 1713 77 12 8 chrX 166262626 166262876 -387420 - L1_Mus3 LINE L1 -6 6632 6382 4 1853 308 310 11 11 chrX 166263245 166263333 -386963 - MER58A DNA MER1_type -11 213 126 4 1853 330 333 68 0 chrX 166263350 166263482 -386814 - MER58A DNA MER1_type -47 177 37 4 1853 243 0 0 0 chrX 166264074 166264101 -386195 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 1853 222 37 0 0 chrX 166264101 166264127 -386169 + (TA)n Simple_repeat Simple_repeat 2 28 0 4 1853 23 0 0 0 chrX 166264128 166264151 -386145 + AT_rich Low_complexity Low_complexity 1 23 0 4 1853 1260 27 0 0 chrX 166264151 166264298 -385998 - B1_Mm SINE Alu 0 147 1 4 1853 376 186 0 41 chrX 166264319 166264392 -385904 - ID_B1 SINE B4 -66 158 89 4 1853 234 0 0 0 chrX 166264419 166264445 -385851 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 1853 28 29 0 0 chrX 166265442 166265477 -384819 + AT_rich Low_complexity Low_complexity 1 35 0 4 1853 264 91 0 0 chrX 166267397 166267441 -382855 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1853 22 35 0 0 chrX 166267652 166267681 -382615 + AT_rich Low_complexity Low_complexity 1 29 0 4 1853 23 0 0 0 chrX 166268450 166268473 -381823 + AT_rich Low_complexity Low_complexity 1 23 0 4 1853 299 354 24 0 chrX 166268713 166268840 -381456 - MIRb SINE MIR -29 239 110 4 1853 2337 86 32 35 chrX 166269255 166269627 -380669 - Lx LINE L1 -1 6653 6283 4 1853 298 349 144 6 chrX 166269979 166270146 -380150 - MLT1D LTR MaLR -52 453 264 4 1853 184 355 75 0 chrX 166270699 166270806 -379490 - MIR SINE MIR -11 251 137 4 1853 180 0 0 0 chrX 166271781 166271801 -378495 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 1853 1093 90 7 0 chrX 166272154 166272299 -377997 - B1_Mus2 SINE Alu -1 146 1 4 1853 196 312 56 61 chrX 166272583 166272711 -377585 - MIR SINE MIR -114 162 32 4 1853 1129 75 0 0 chrX 166273485 166273632 -376664 + B1_Mus2 SINE Alu 1 147 0 4 1853 378 139 0 0 chrX 166273632 166273718 -376578 + (A)n Simple_repeat Simple_repeat 1 86 0 4 1853 22 0 0 0 chrX 166273924 166273946 -376350 + AT_rich Low_complexity Low_complexity 1 22 0 4 1853 5284 3 0 0 chrX 166274053 166274648 -375648 + L1Md_A LINE L1 4992 5586 -297 4 1853 9024 2 0 0 chrX 166274648 166275644 -374652 + L1Md_A LINE L1 5587 6582 0 4 1853 1318 248 32 7 chrX 166275644 166275696 -374600 + L1MC LINE L1 5616 5677 -2108 4 1853 253 338 33 33 chrX 166277074 166277227 -373069 - L3b LINE CR1 -329 153 1 4 1853 216 67 0 0 chrX 166277355 166277385 -372911 + (TTG)n Simple_repeat Simple_repeat 1 30 0 4 1853 321 136 0 0 chrX 166277841 166277907 -372389 + (TC)n Simple_repeat Simple_repeat 1 66 0 4 1853 23 0 0 0 chrX 166278727 166278750 -371546 + AT_rich Low_complexity Low_complexity 1 23 0 4 1853 269 229 36 12 chrX 166278960 166279044 -371252 + L1MB7 LINE L1 5544 5629 -555 4 1853 626 294 71 20 chrX 166279057 166279255 -371041 + B4A SINE B4 1 208 -84 4 1853 348 272 115 45 chrX 166279359 166279548 -370748 + L1MB7 LINE L1 5633 5835 -2160 4 1853 495 306 90 12 chrX 166279572 166279827 -370469 + L1MB7 LINE L1 5910 6184 0 4 1853 217 274 0 0 chrX 166280268 166280319 -369977 + (TA)n Simple_repeat Simple_repeat 2 52 0 4 1853 534 296 14 0 chrX 166280393 166280535 -369761 - B1F1 SINE Alu -5 144 1 4 1853 231 61 0 0 chrX 166283035 166283068 -367228 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 4 1853 343 0 21 21 chrX 166283845 166283893 -366403 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 4 1853 231 36 0 0 chrX 166284841 166284869 -365427 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1853 1082 249 172 30 chrX 166284957 166285417 -364879 - Lx5 LINE L1 -52 7408 6506 4 1853 7697 197 89 11 chrX 166285450 166287551 -362745 - Lx5 LINE L1 -687 6363 4079 4 1853 3284 181 25 15 chrX 166287548 166288008 -362288 - Lx5 LINE L1 -2781 3096 2638 4 1853 270 0 0 0 chrX 166288008 166288038 -362258 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 4 1853 3284 181 25 15 chrX 166288038 166288250 -362046 - Lx5 LINE L1 -3240 2637 2417 4 1853 23 0 0 0 chrX 166288561 166288584 -361712 + AT_rich Low_complexity Low_complexity 1 23 0 4 1853 276 337 99 10 chrX 166289081 166289273 -361023 + L2a LINE L2 3205 3413 -13 4 1853 26 30 0 0 chrX 166289274 166289307 -360989 + AT_rich Low_complexity Low_complexity 1 33 0 4 1853 682 277 0 0 chrX 166289307 166289466 -360830 - RSINE1 SINE B4 -4 161 3 4 1853 277 242 15 15 chrX 166289742 166289809 -360487 + ID_B1 SINE B4 113 179 -45 4 1853 1970 137 56 20 chrX 166289928 166290285 -360011 + Lx2 LINE L1 6628 6997 0 4 1853 217 186 29 0 chrX 166290375 166290445 -359851 + (TA)n Simple_repeat Simple_repeat 1 72 0 4 1853 200 312 74 49 chrX 166291338 166291419 -358877 - L2a LINE L2 -60 3366 3284 4 1853 181 363 113 30 chrX 166291569 166291799 -358497 - L2a LINE L2 -338 3081 2833 4 1853 477 300 157 64 chrX 166291972 166292207 -358089 + B4 SINE B4 1 257 -35 4 1853 311 0 26 0 chrX 166292225 166292264 -358032 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1853 328 292 9 19 chrX 166292522 166292630 -357666 + PB1D10 SINE Alu 2 108 -9 4 1853 294 206 0 0 chrX 166293126 166293189 -357107 + (TATG)n Simple_repeat Simple_repeat 2 64 0 4 1853 996 183 80 10 chrX 166293313 166293512 -356784 - B3 SINE B2 -2 214 2 4 1853 21 0 0 0 chrX 166293528 166293549 -356747 + AT_rich Low_complexity Low_complexity 1 21 0 4 1853 285 232 50 0 chrX 166293636 166293735 -356561 - Lx9 LINE L1 -9 7635 7532 4 1853 462 36 0 0 chrX 166293750 166293806 -356490 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1853 496 293 16 94 chrX 166293808 166293960 -356336 - Lx9 LINE L1 -194 7450 7297 4 1853 261 0 0 0 chrX 166293960 166293989 -356307 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1853 496 293 16 94 chrX 166293989 166294081 -356215 - Lx9 LINE L1 -348 7296 7225 4 1853 234 383 8 45 chrX 166294258 166294392 -355904 - MLT1J2 LTR MaLR -319 129 1 4 1853 602 345 51 80 chrX 166294702 166295077 -355219 - MLT1L LTR MaLR -69 541 178 4 1853 1094 97 0 0 chrX 166295235 166295380 -354916 + B1_Mus1 SINE Alu 4 148 0 4 1853 247 65 43 0 chrX 166295388 166295434 -354862 + (CAA)n Simple_repeat Simple_repeat 1 48 0 4 1853 216 291 35 56 chrX 166295689 166295831 -354465 - B4A SINE B4 -108 184 46 4 1853 742 153 59 39 chrX 166295794 166295977 -354319 - RLTR9B2 LTR ERVK -285 135 1 4 1853 287 280 0 26 chrX 166295977 166296054 -354242 - B4 SINE B4 -217 75 1 4 1853 232 266 121 50 chrX 166296142 166296241 -354055 - RMER12 LTR ERVK -486 836 731 4 1853 246 62 0 0 chrX 166297001 166297033 -353263 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 4 1853 421 312 72 0 chrX 166297193 166297318 -352978 + ID_B1 SINE B4 78 211 -13 4 1853 186 71 0 0 chrX 166297318 166297346 -352950 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 4 1853 1001 164 124 0 chrX 166297428 166297629 -352667 - URR1A DNA MER1_type 0 226 1 4 1853 485 270 0 0 chrX 166299510 166299610 -350686 - PB1D7 SINE Alu -10 110 11 4 1853 602 106 10 0 chrX 166299762 166299866 -350430 - Lx LINE L1 0 6654 6550 4 1853 213 140 0 23 chrX 166301350 166301394 -348902 + A-rich Low_complexity Low_complexity 5 47 0 4 1853 1445 32 5 0 chrX 166301440 166301661 -348635 + (GAAA)n Simple_repeat Simple_repeat 1 221 0 4 1853 943 155 160 0 chrX 166301678 166301859 -348437 + ORR1C1 LTR MaLR 169 378 0 4 1853 583 284 67 43 chrX 166301953 166302163 -348133 + ID_B1 SINE B4 2 216 -8 4 1853 267 203 0 0 chrX 166302167 166302236 -348060 + GA-rich Low_complexity Low_complexity 2 70 0 4 1853 768 151 0 0 chrX 166302269 166302448 -347848 + GA-rich Low_complexity Low_complexity 2 180 0 4 1853 251 305 12 12 chrX 166302483 166302566 -347730 + CT-rich Low_complexity Low_complexity 2 84 0 4 1853 8864 76 4 1 chrX 166302762 166304717 -345579 - L1_Mus1 LINE L1 -1 6566 4604 4 1853 2264 71 7 7 chrX 166304721 166305020 -345276 - L1Md_F2 LINE L1 -20 6562 6264 4 1853 1145 87 0 0 chrX 166305020 166305170 -345126 + L1Md_F2 LINE L1 6126 6275 -307 4 1853 1247 81 0 0 chrX 166305168 166305329 -344967 - L1_Mus1 LINE L1 -1268 4615 4455 4 1853 1282 106 0 50 chrX 166305329 166305368 -344928 - B2_Mm1a SINE B2 -3 190 161 4 1853 207 0 0 0 chrX 166305368 166305391 -344905 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 4 1853 1282 106 0 50 chrX 166305391 166305550 -344746 - B2_Mm1a SINE B2 -33 160 2 4 1853 1421 115 1 7 chrX 166305550 166305775 -344521 - L1_Mus1 LINE L1 -1681 4465 4242 4 1853 253 68 22 22 chrX 166307009 166307054 -343242 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 1853 337 0 25 76 chrX 166307176 166307255 -343041 + (TA)n Simple_repeat Simple_repeat 2 76 0 4 1853 200 192 37 37 chrX 166307976 166308030 -342266 - MIRm SINE MIR -146 130 77 4 1853 225 360 12 0 chrX 166308777 166308863 -341433 + L2 LINE L2 2471 2557 -862 4 1853 219 232 0 0 chrX 166308943 166308999 -341297 + CT-rich Low_complexity Low_complexity 2 57 0 4 1853 309 351 32 0 chrX 166309059 166309153 -341143 - PB1D7 SINE Alu -21 99 3 4 1853 339 333 0 0 chrX 166309070 166309154 -341142 - ID_B1 SINE B4 -58 166 83 4 1853 336 251 122 50 chrX 166309625 166309805 -340491 + L2a LINE L2 3234 3426 0 4 1853 391 258 35 0 chrX 166309896 166309993 -340303 - PB1D10 SINE Alu -8 109 10 4 1853 183 80 0 0 chrX 166310009 166310034 -340262 + (TCC)n Simple_repeat Simple_repeat 3 27 0 4 1853 511 231 16 49 chrX 166310056 166310179 -340117 - PB1D7 SINE Alu -1 119 1 4 1853 225 0 0 0 chrX 166311888 166311913 -338383 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 4 1853 399 318 70 70 chrX 166311918 166312104 -338192 - RMER15 LTR ERVL -119 456 271 4 1853 662 257 29 0 chrX 166312190 166312330 -337966 - B1_Mur1 SINE Alu -5 144 1 4 1853 1764 183 25 76 chrX 166312380 166312776 -337520 - ORR1C1 LTR MaLR -2 376 1 4 1853 345 264 137 15 chrX 166313319 166313523 -336773 - HAL1 LINE L1 -1 2506 2278 5 1853 269 301 21 0 chrX 166313584 166313677 -336619 + GA-rich Low_complexity Low_complexity 3 97 0 5 1853 651 278 12 31 chrX 166313684 166313847 -336449 + B4 SINE B4 129 288 -4 5 1853 256 315 32 21 chrX 166313900 166313994 -336302 + ID_B1 SINE B4 73 167 -57 5 1853 365 233 61 104 chrX 166313914 166314029 -336267 + PB1D10 SINE Alu 6 115 -2 5 1853 548 275 52 5 chrX 166314355 166314549 -335747 - HAL1 LINE L1 -753 1754 1552 5 1853 788 271 144 47 chrX 166314732 166315092 -335204 + MLT2C1 LTR ERVL 3 397 0 5 1853 389 345 8 17 chrX 166316131 166316249 -334047 + MER20 DNA MER1_type 102 218 -1 5 1853 364 296 0 48 chrX 166316257 166316360 -333936 + Charlie12 DNA MER1_type 1 98 -2775 5 1853 315 0 0 0 chrX 166316360 166316395 -333901 + (TC)n Simple_repeat Simple_repeat 1 35 0 5 1853 328 55 36 0 chrX 166316396 166316451 -333845 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 1853 199 93 47 0 chrX 166316795 166316838 -333458 + (TA)n Simple_repeat Simple_repeat 1 45 0 5 1853 198 274 83 28 chrX 166320775 166320884 -329412 - MIRc SINE MIR -40 228 114 5 1853 21 0 0 0 chrX 166322588 166322609 -327687 + AT_rich Low_complexity Low_complexity 1 21 0 5 1853 439 273 87 11 chrX 166323340 166323525 -326771 - L1MA6 LINE L1 -13 6287 6089 5 1853 1036 79 0 0 chrX 166323646 166323786 -326510 - B1_Mus2 SINE Alu 0 147 8 5 1853 633 330 27 5 chrX 166323823 166324045 -326251 + B4 SINE B4 1 227 -65 5 1853 594 267 87 51 chrX 166324079 166324332 -325964 + Lx8 LINE L1 7192 7453 -20 5 1853 231 114 0 0 chrX 166324336 166324371 -325925 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 1853 216 0 0 0 chrX 166324454 166324478 -325818 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1853 889 96 13 19 chrX 166325799 166325958 -324338 + (TCTCC)n Simple_repeat Simple_repeat 1 158 0 5 1853 270 0 0 0 chrX 166325961 166325991 -324305 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 5 1853 658 233 0 15 chrX 166326048 166326183 -324113 - B1_Mur2 SINE Alu -16 133 1 5 1853 1283 65 12 6 chrX 166326614 166326785 -323511 - B2_Mm2 SINE B2 -22 173 2 5 1853 256 324 14 0 chrX 166327073 166327147 -323149 - PB1D10 SINE Alu -40 77 3 5 1853 317 360 9 0 chrX 166327182 166327293 -323003 + B1F SINE Alu 13 124 -25 5 1853 361 333 24 8 chrX 166327799 166327926 -322370 + B1F SINE Alu 1 129 -20 5 1853 225 0 0 0 chrX 166327930 166327955 -322341 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 5 1853 183 42 0 0 chrX 166328337 166328361 -321935 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 5 231 232 322 50 74 chrX 166330140 166330438 -319858 - L1MC LINE L1 -2007 5875 5585 5 1854 215 289 19 19 chrX 166330491 166330544 -319752 - PB1 SINE Alu -64 63 11 5 1854 802 207 0 21 chrX 166330945 166331088 -319208 - B1_Mur3 SINE Alu -5 144 5 5 1854 2105 82 28 42 chrX 166331244 166331599 -318697 - L1_Mus3 LINE L1 -2 6636 6287 5 1854 258 294 11 11 chrX 166331622 166331715 -318581 + (TATATG)n Simple_repeat Simple_repeat 6 98 0 5 1854 324 358 92 35 chrX 166331795 166331937 -318359 - B4A SINE B4 -140 152 3 5 1854 300 296 10 39 chrX 166332046 166332148 -318148 - PB1D10 SINE Alu -18 99 1 5 1854 232 231 108 108 chrX 166332344 166332405 -317891 - L1MD2 LINE L1 -337 6022 5957 5 1854 459 92 0 0 chrX 166332405 166332470 -317826 + (CTA)n Simple_repeat Simple_repeat 2 66 0 5 1854 268 341 0 0 chrX 166332472 166332554 -317742 - ID4_ SINE ID 0 83 2 5 1854 232 231 108 108 chrX 166332554 166332591 -317705 - L1MD2 LINE L1 -403 5956 5921 5 1854 199 79 26 26 chrX 166333136 166333175 -317121 + (TTCTC)n Simple_repeat Simple_repeat 3 41 0 5 1854 265 253 48 0 chrX 166333240 166333323 -316973 - Lx8 LINE L1 -1572 5901 5815 5 1854 212 218 11 44 chrX 166333652 166333743 -316553 + (TATAA)n Simple_repeat Simple_repeat 2 89 0 5 1854 391 243 0 0 chrX 166333924 166333998 -316298 - ID4 SINE ID -9 74 1 5 1854 186 71 0 0 chrX 166334726 166334754 -315542 + (TTTAG)n Simple_repeat Simple_repeat 3 30 0 5 1854 501 17 0 0 chrX 166334783 166334841 -315455 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 1854 678 278 60 38 chrX 166334846 166335149 -315147 - MER2 DNA MER2_type -23 322 1 5 1854 2400 68 3 0 chrX 166335849 166336158 -314138 - L1_Mus1 LINE L1 0 6567 6258 5 1854 735 232 146 10 chrX 166336311 166336599 -313697 + L1MB7 LINE L1 5858 6184 0 5 1854 386 242 196 91 chrX 166337135 166337344 -312952 - MER58B DNA MER1_type -110 231 1 5 1854 23 54 0 0 chrX 166337572 166337609 -312687 + AT_rich Low_complexity Low_complexity 1 37 0 5 1854 729 329 163 22 chrX 166339305 166339846 -310450 - MLT1E2 LTR MaLR 0 627 11 5 1854 848 184 153 0 chrX 166340021 166340211 -310085 + URR1B DNA MER1_type 7 225 0 5 1854 255 150 0 0 chrX 166341996 166342056 -308240 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 1854 223 152 43 0 chrX 166342390 166342436 -307860 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1854 631 196 17 11 chrX 166343552 166343727 -306569 + CT-rich Low_complexity Low_complexity 2 177 0 5 1854 252 0 0 0 chrX 166343820 166343848 -306448 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1854 25 0 0 0 chrX 166345029 166345054 -305242 + AT_rich Low_complexity Low_complexity 1 25 0 5 1854 342 288 0 0 chrX 166345298 166345378 -304918 - ID4_ SINE ID -2 81 2 5 1854 850 235 82 43 chrX 166345547 166345827 -304469 + B4A SINE B4 1 291 -1 5 1854 271 289 13 0 chrX 166345829 166345905 -304391 + (CATATA)n Simple_repeat Simple_repeat 6 82 0 5 1854 323 192 95 14 chrX 166346428 166346502 -303794 + MLT1A1 LTR MaLR 1 80 -328 5 1854 286 295 48 48 chrX 166346567 166346713 -303583 + MLT1A1 LTR MaLR 220 408 0 5 1854 574 367 96 4 chrX 166347506 166347766 -302530 - B4A SINE B4 -8 284 1 5 1854 724 288 136 31 chrX 166348212 166348506 -301790 + LTR40a LTR ERVL 169 493 -26 5 1854 526 316 74 6 chrX 166348755 166348930 -301366 + B3A SINE B2 1 187 -11 5 1854 236 367 61 22 chrX 166349178 166349359 -300937 - MIRb SINE MIR -72 196 9 5 1854 563 277 261 11 chrX 166349790 166350008 -300288 + B4A SINE B4 22 292 0 5 1854 215 209 0 0 chrX 166350014 166350057 -300239 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 1854 191 32 0 61 chrX 166350057 166350090 -300206 + (CAGAGA)n Simple_repeat Simple_repeat 6 36 0 5 1854 532 273 68 8 chrX 166350774 166350907 -299389 - RSINE1 SINE B4 -22 143 3 5 1854 354 23 0 0 chrX 166350922 166350965 -299331 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1854 491 250 10 0 chrX 166351857 166351953 -298343 + PB1D10 SINE Alu 1 97 -20 5 1854 243 0 0 0 chrX 166352825 166352852 -297444 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1854 837 261 155 24 chrX 166352972 166353263 -297033 + MER2 DNA MER2_type 16 344 -1 5 1854 537 139 23 0 chrX 166355857 166355943 -294353 + URR1A DNA MER1_type 83 170 -56 5 1854 23 33 0 0 chrX 166356236 166356266 -294030 + AT_rich Low_complexity Low_complexity 1 30 0 5 1854 208 119 48 0 chrX 166356266 166356308 -293988 + (TCTG)n Simple_repeat Simple_repeat 1 44 0 5 1854 550 245 11 91 chrX 166356308 166356483 -293813 - RSINE1 SINE B4 0 165 5 5 1854 375 78 0 0 chrX 166357303 166357354 -292942 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1854 405 270 103 67 chrX 166357407 166357689 -292607 - MamRep4096 DNA hAT? -132 294 3 5 1854 401 269 0 0 chrX 166358063 166358141 -292155 + B3A SINE B2 1 78 -120 5 1854 300 111 0 0 chrX 166358167 166358212 -292084 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 1854 661 323 96 79 chrX 166358325 166358816 -291480 - MLT1D LTR MaLR 0 505 7 5 1854 710 198 220 6 chrX 166360012 166360180 -290116 - B3 SINE B2 -11 205 2 5 1854 264 324 27 45 chrX 166360875 166360985 -289311 + MER58A DNA MER1_type 16 123 -101 5 1854 594 329 84 38 chrX 166361418 166361810 -288486 - L2 LINE L2 -352 3067 2658 5 1854 893 270 31 31 chrX 166361985 166362245 -288051 - L1MA8 LINE L1 -376 5915 5656 5 1854 300 296 139 0 chrX 166362353 166362461 -287835 - B4A SINE B4 -6 286 164 5 1854 419 265 38 29 chrX 166362805 166362910 -287386 + PB1D10 SINE Alu 9 114 -3 5 1854 604 283 0 0 chrX 166368036 166368174 -282122 + B1_Mur1 SINE Alu 1 138 -11 5 1854 180 0 0 0 chrX 166368174 166368194 -282102 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5 1854 1629 154 7 26 chrX 166368620 166368927 -281369 - RLTR11B LTR ERVK -47 406 106 5 1854 529 246 0 17 chrX 166369341 166369457 -280839 - B1F1 SINE Alu -1 148 35 5 1854 529 152 0 19 chrX 166369549 166369656 -280640 + CT-rich Low_complexity Low_complexity 3 107 0 5 1854 767 200 12 0 chrX 166369753 166369913 -280383 - URR1A DNA MER1_type -1 225 64 5 1854 269 243 0 51 chrX 166369954 166370032 -280264 + PB1D9 SINE Alu 38 111 -9 5 1854 222 323 0 0 chrX 166370062 166370127 -280169 + ID4_ SINE ID 18 82 -1 5 1854 1120 88 0 0 chrX 166370813 166370960 -279336 + B1_Mus2 SINE Alu 1 147 0 5 1854 321 333 75 28 chrX 166371315 166371539 -278757 + MIR SINE MIR 20 246 -16 5 1854 1853 116 32 101 chrX 166373733 166374108 -276188 - Lx LINE L1 0 6654 6306 5 1854 609 14 0 0 chrX 166375869 166375939 -274357 + (CA)n Simple_repeat Simple_repeat 2 71 0 5 1854 307 321 110 62 chrX 166376409 166376555 -273741 + B4A SINE B4 1 153 -139 5 1854 215 216 23 139 chrX 166376680 166376766 -273530 + MIRc SINE MIR 112 187 -81 6 1854 296 338 0 6 chrX 166377489 166377583 -272713 + ID4 SINE ID 7 97 -55 6 1854 261 0 0 0 chrX 166377809 166377838 -272458 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1854 318 210 32 0 chrX 166377875 166377937 -272359 + ID4_ SINE ID 3 66 -17 6 1854 440 280 16 8 chrX 166378149 166378275 -272021 + MER20 DNA MER1_type 85 211 -8 6 1854 275 311 106 10 chrX 166379292 166379396 -270900 - MER58B DNA MER1_type -51 290 177 6 1854 490 122 73 0 chrX 166379861 166379943 -270353 - B1_Mur4 SINE Alu -56 94 7 6 1854 305 59 0 68 chrX 166380001 166380074 -270222 + (CAAAA)n Simple_repeat Simple_repeat 2 69 0 6 1854 346 119 226 0 chrX 166380107 166380191 -270105 - Lx LINE L1 -3 6651 6549 6 1854 725 111 0 0 chrX 166380196 166380295 -270001 + Lx LINE L1 6014 6112 -542 6 1854 259 149 187 13 chrX 166380429 166380504 -269792 - Lx8 LINE L1 -2 7471 7384 6 1854 338 0 24 0 chrX 166380516 166380558 -269738 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 6 1854 7470 52 16 8 chrX 166380569 166381508 -268788 - L1_Mus1 LINE L1 0 6567 5621 6 1854 192 298 73 21 chrX 166382200 166382296 -268000 + MIRb SINE MIR 38 138 -130 6 1854 302 223 24 19 chrX 166382417 166382636 -267660 + CT-rich Low_complexity Low_complexity 1 220 0 6 1854 642 236 7 33 chrX 166382638 166382791 -267505 + RMER10B LTR ERVL 195 343 -55 6 1854 192 77 0 0 chrX 166383393 166383419 -266877 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1854 583 267 7 15 chrX 166383627 166383764 -266532 - Lx6 LINE L1 -293 7167 7032 6 1854 1061 192 19 0 chrX 166383779 166383992 -266304 - L1MA6 LINE L1 -376 5924 5708 6 1854 1132 88 0 0 chrX 166384150 166384297 -265999 - B1_Mus2 SINE Alu 0 147 1 6 1854 849 273 15 0 chrX 166384332 166384537 -265759 - B3 SINE B2 -8 208 1 6 1854 226 360 11 0 chrX 166387007 166387096 -263200 + B1F SINE Alu 60 149 0 6 1854 218 245 0 0 chrX 166387349 166387402 -262894 + ID4 SINE ID 6 58 -25 6 1854 212 298 58 35 chrX 166387613 166387700 -262596 - B1_Mur1 SINE Alu -14 135 47 6 1854 212 290 71 61 chrX 166389414 166389513 -260783 + B1F2 SINE Alu 1 100 -49 6 1854 661 230 29 38 chrX 166389517 166389691 -260605 - B3 SINE B2 -2 193 24 6 1854 1224 41 0 0 chrX 166390142 166390287 -260009 + B1_Mus1 SINE Alu 2 146 -2 6 1854 288 0 0 0 chrX 166390287 166390319 -259977 + (TAA)n Simple_repeat Simple_repeat 2 33 0 6 1854 214 262 202 0 chrX 166391758 166391842 -258454 + MER5B DNA MER1_type 1 101 -77 6 1854 21 0 0 0 chrX 166392269 166392290 -258006 + AT_rich Low_complexity Low_complexity 1 21 0 6 1854 25 0 0 0 chrX 166392314 166392339 -257957 + AT_rich Low_complexity Low_complexity 1 25 0 6 1854 183 42 0 0 chrX 166393494 166393518 -256778 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1854 354 23 0 0 chrX 166393742 166393785 -256511 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 6 1854 837 232 23 59 chrX 166393805 166394025 -256271 + B3 SINE B2 1 212 -4 6 1854 21 0 0 0 chrX 166394028 166394049 -256247 + AT_rich Low_complexity Low_complexity 1 21 0 6 1854 236 291 157 48 chrX 166394068 166394151 -256145 + B1F2 SINE Alu 7 98 -51 6 1854 279 0 0 0 chrX 166394319 166394350 -255946 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1854 383 230 0 24 chrX 166394366 166394535 -255761 + (CAGA)n Simple_repeat Simple_repeat 2 166 0 6 1854 412 227 6 22 chrX 166394560 166394740 -255556 + (CAGA)n Simple_repeat Simple_repeat 4 180 0 6 1854 682 175 0 28 chrX 166394789 166394971 -255325 + (CAGA)n Simple_repeat Simple_repeat 4 180 0 6 1854 289 309 0 36 chrX 166395340 166395424 -254872 + ID4 SINE ID 2 82 -1 6 1854 537 30 0 0 chrX 166397075 166397142 -253154 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1854 459 113 0 0 chrX 166397917 166397988 -252308 + (TA)n Simple_repeat Simple_repeat 2 72 0 6 1854 189 0 0 0 chrX 166398242 166398263 -252033 + (TC)n Simple_repeat Simple_repeat 2 22 0 6 1854 486 0 0 0 chrX 166398923 166398977 -251319 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1854 389 364 67 53 chrX 166399045 166399254 -251042 + MER58A DNA MER1_type 7 218 -6 6 1854 322 284 0 69 chrX 166400471 166400505 -249791 - PB1D10 SINE Alu -1 116 22 6 1854 383 221 0 0 chrX 166400505 166400573 -249723 - ID_B1 SINE B4 -54 170 103 6 1854 360 0 0 0 chrX 166401448 166401488 -248808 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1854 356 297 45 0 chrX 166402249 166402360 -247936 + PB1D7 SINE Alu 1 116 -4 6 1854 1221 41 7 0 chrX 166402484 166402629 -247667 + B1_Mus2 SINE Alu 2 147 0 6 1854 253 181 172 108 chrX 166402723 166402816 -247480 - BC1_Mm scRNA scRNA -48 104 6 6 1854 401 248 8 76 chrX 166404230 166404361 -245935 + B3A SINE B2 75 196 -2 6 1854 24 53 0 0 chrX 166404364 166404402 -245894 + AT_rich Low_complexity Low_complexity 1 38 0 6 1854 333 266 65 80 chrX 166405021 166405221 -245075 + Lx9 LINE L1 7444 7640 -4 6 1854 271 206 0 16 chrX 166405527 166405591 -244705 + L1MB4 LINE L1 5861 5923 -257 6 1854 3093 235 14 12 chrX 166405593 166406236 -244060 - Lx5 LINE L1 -204 6846 6203 6 1854 858 245 54 15 chrX 166406356 166406559 -243737 - Lx6 LINE L1 -221 7239 7029 6 1854 827 197 138 10 chrX 166406568 166406763 -243533 + URR1A DNA MER1_type 7 226 0 6 1854 4376 207 54 20 chrX 166406773 166407685 -242611 - Lx6 LINE L1 -435 7025 6083 6 1854 876 260 45 69 chrX 166407718 166408007 -242289 + B4 SINE B4 1 282 -10 6 1854 581 66 0 62 chrX 166408150 166408247 -242049 + L1_Mus2 LINE L1 6476 6566 0 6 1854 990 68 76 0 chrX 166409663 166409795 -240501 + B1_Mus1 SINE Alu 2 143 -5 6 1854 342 67 0 0 chrX 166409813 166409858 -240438 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 1854 270 0 0 0 chrX 166409858 166409888 -240408 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 1854 1613 199 65 51 chrX 166410105 166410539 -239757 + RMER10A LTR ERVL 1 440 -2 6 1854 252 0 0 0 chrX 166411353 166411381 -238915 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 1854 217 266 12 25 chrX 166411383 166411464 -238832 + PB1D10 SINE Alu 32 111 -6 6 1854 186 71 0 0 chrX 166411860 166411888 -238408 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1854 518 369 12 0 chrX 166411895 166412055 -238241 - RSINE1 SINE B4 0 165 4 6 1854 386 146 12 0 chrX 166412512 166412594 -237702 + (CA)n Simple_repeat Simple_repeat 2 84 0 6 1854 1009 276 20 64 chrX 166414013 166414404 -235892 + L1MA5 LINE L1 5488 5861 -439 6 1854 2263 57 4 0 chrX 166414410 166414689 -235607 - L1Md_F2 LINE L1 -400 6182 5903 6 1854 1094 22 14 21 chrX 166414689 166414830 -235466 + L1_Mm LINE L1 5321 5460 -423 6 1854 256 274 122 47 chrX 166415094 166415201 -235095 - MLT1A1 LTR MaLR 0 408 294 6 1854 523 261 42 27 chrX 166415453 166415730 -234566 - L1MA7 LINE L1 0 6291 6020 6 1854 366 289 187 11 chrX 166415740 166415922 -234374 - MLT1E2 LTR MaLR -9 496 283 6 1854 388 368 29 0 chrX 166415995 166416166 -234130 - MLT1E2 LTR MaLR -441 186 11 6 1854 208 290 29 137 chrX 166417545 166417749 -232547 + MER5A DNA MER1_type 4 185 -4 6 1854 441 0 0 0 chrX 166418566 166418615 -231681 + (TTCC)n Simple_repeat Simple_repeat 3 51 0 6 1854 340 229 141 14 chrX 166420547 166420689 -229607 - L1MB8 LINE L1 -235 5943 5784 6 1854 231 36 0 0 chrX 166420950 166420978 -229318 + (CGAAA)n Simple_repeat Simple_repeat 4 31 0 6 1854 449 358 67 5 chrX 166422356 166422564 -227732 + MER58A DNA MER1_type 2 222 -2 6 1854 1711 16 5 0 chrX 166423310 166423501 -226795 - B2_Mm1a SINE B2 0 193 2 6 1854 707 171 18 24 chrX 166425718 166426065 -224231 + (TCTG)n Simple_repeat Simple_repeat 1 344 0 6 1854 688 182 19 14 chrX 166426090 166426512 -223784 + (TCTG)n Simple_repeat Simple_repeat 1 423 0 6 1854 213 159 0 0 chrX 166429400 166429444 -220852 + (TCTG)n Simple_repeat Simple_repeat 4 47 0 6 1854 896 116 0 27 chrX 166431032 166431182 -219114 - B1_Mus2 SINE Alu 0 147 2 6 1854 307 188 0 55 chrX 166431266 166431339 -218957 - B1_Mur3 SINE Alu -79 70 2 6 1854 213 159 0 0 chrX 166436403 166436447 -213849 + (TCTG)n Simple_repeat Simple_repeat 4 47 0 6 1854 25 0 0 0 chrX 166439232 166439257 -211039 + AT_rich Low_complexity Low_complexity 1 25 0 6 1854 25 0 0 0 chrX 166440565 166440590 -209706 + AT_rich Low_complexity Low_complexity 1 25 0 6 1854 25 0 0 0 chrX 166443036 166443061 -207235 + AT_rich Low_complexity Low_complexity 1 25 0 6 1854 227 166 75 38 chrX 166443187 166443277 -207019 + PB1D7 SINE Alu 15 107 -42 6 1854 25 0 0 0 chrX 166446740 166446765 -203531 + AT_rich Low_complexity Low_complexity 1 25 0 6 1855 233 143 24 0 chrX 166500769 166500811 -149485 - Lx3B LINE L1 -197 6776 6734 1 1855 228 170 19 19 chrX 166501688 166501742 -148554 - Lx3_Mus LINE L1 -215 6794 6741 2 1855 242 170 21 0 chrX 166502235 166502282 -148014 - Lx3B LINE L1 -197 6776 6729 3 1855 270 193 35 0 chrX 166502316 166502373 -147923 - Lx3B LINE L1 -186 6787 6729 4 1855 242 170 21 0 chrX 166503386 166503433 -146863 - Lx3B LINE L1 -197 6776 6729 5 1855 270 193 35 0 chrX 166503467 166503524 -146772 - Lx3B LINE L1 -186 6787 6729 6 1855 225 111 21 43 chrX 166504814 166504861 -145435 - Lx3B LINE L1 -197 6776 6731 7 1855 228 156 22 0 chrX 166505578 166505623 -144673 - Lx3B LINE L1 -197 6776 6731 8 1855 225 200 26 39 chrX 166505758 166505836 -144460 - Lx3B LINE L1 -166 6807 6731 9 1855 240 151 19 19 chrX 166505940 166505994 -144302 - Lx3B LINE L1 -197 6776 6723 1 1855 225 111 21 43 chrX 166507168 166507215 -143081 - Lx3B LINE L1 -197 6776 6731 1 1855 9037 147 66 17 chrX 166514743 166516511 -133785 - MurSatRep1 Unknown Unknown 0 2137 284 1 1855 493 200 28 28 chrX 166516511 166516619 -133677 + PB1D9 SINE Alu 1 108 -12 1 1855 795 129 14 14 chrX 166516625 166516766 -133530 - MurSatRep1 Unknown Unknown -1996 141 1 1 1855 577 304 9 33 chrX 166516859 166517070 -133226 + B3 SINE B2 10 215 -1 1 1855 273 308 12 43 chrX 166517176 166517339 -132957 + SRV_MM-int LTR ERVK 2430 2587 -3580 1 1855 2038 339 55 31 chrX 166517535 166519039 -131257 + RLTR45-int LTR ERVK 4209 5748 -2469 1 1855 331 252 26 92 chrX 166519440 166519593 -130703 + RLTR45-int LTR ERVK 6192 6334 -1883 1 1855 2728 22 0 0 chrX 166519956 166520276 -130020 + RLTR45-int LTR ERVK 1329 1648 -5596 1 1855 7584 154 15 14 chrX 166520259 166521764 -128532 + RLTR45-int LTR ERVK 6331 7804 -413 1 1855 2813 88 118 7 chrX 166521764 166522198 -128098 + RLTR45 LTR ERVK 1 482 0 1 1855 730 57 0 28 chrX 166522285 166522393 -127903 + B1_Mus1 SINE Alu 39 143 -5 1 1855 340 174 0 104 chrX 166522402 166522479 -127817 - B1_Mur4 SINE Alu -78 72 1 1 1855 308 182 26 13 chrX 166522489 166522567 -127729 + B1_Mur3 SINE Alu 70 148 -1 2 1855 333 0 0 0 chrX 166522715 166522752 -127544 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 1855 948 270 39 108 chrX 166522831 166523292 -127004 + RLTR23 LTR ERV1 2 430 0 2 1855 248 336 82 0 chrX 166523388 166523498 -126798 - ORR1D-int LTR MaLR -24 1485 1367 2 1855 934 69 0 71 chrX 166523494 166523555 -126741 - B2_Mm2 SINE B2 -50 145 90 2 1855 2716 87 10 15 chrX 166523555 166523966 -126330 + RLTR9E LTR ERVK 1 409 0 2 1855 934 69 0 71 chrX 166523966 166524059 -126237 - B2_Mm2 SINE B2 -106 89 2 2 1855 1281 311 85 43 chrX 166524070 166524649 -125647 - ORR1D-int LTR MaLR -146 1224 622 2 1855 453 353 42 23 chrX 166524666 166524973 -125323 - ORR1D-int LTR MaLR -1228 352 12 2 1855 593 313 92 64 chrX 166525009 166525401 -124895 - MTD LTR MaLR -16 403 1 2 1855 1056 62 7 0 chrX 166525427 166525572 -124724 + B1_Mus2 SINE Alu 2 147 0 2 1855 1195 45 7 0 chrX 166526056 166526214 -124082 + B2_Mm2 SINE B2 1 160 -33 2 1855 423 0 0 0 chrX 166526214 166526261 -124035 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 2 1855 1029 133 67 0 chrX 166526261 166526282 -124014 + B2_Mm1a SINE B2 161 191 -2 2 1855 21 0 0 0 chrX 166526304 166526325 -123971 + AT_rich Low_complexity Low_complexity 1 21 0 3 1855 1105 27 7 39 chrX 166526615 166526768 -123528 + B1_Mus1 SINE Alu 1 148 0 3 1855 358 281 61 61 chrX 166526787 166526984 -123312 - MLT1A0 LTR MaLR -89 276 80 3 1855 1620 0 0 0 chrX 166527166 166527506 -122790 + (TTAGGG)n Simple_repeat Simple_repeat 1 340 0 3 1855 232 133 22 0 chrX 166581390 166581435 -68861 - Lx3B LINE L1 -197 6776 6731 3 1855 231 170 21 0 chrX 166586108 166586155 -64141 - Lx3B LINE L1 -195 6778 6731 3 1856 228 170 21 0 chrX 166598720 166598767 -51529 - Lx3_Mus LINE L1 -215 6794 6747 3 1856 253 193 35 0 chrX 166598801 166598858 -51438 - Lx3B LINE L1 -186 6787 6729 3 1856 248 175 21 2 chrX 166600052 166600106 -50190 - Lx3B LINE L1 -212 6797 6731 3 1856 238 196 24 5 chrX 166602362 166602438 -47858 - Lx3B LINE L1 -174 6807 6731 3 1856 237 203 51 0 chrX 166608100 166608159 -42137 - Lx3A LINE L1 -195 6786 6725 4 1856 236 156 22 0 chrX 166612064 166612109 -38187 - Lx3B LINE L1 -197 6776 6731 4 1856 236 156 22 0 chrX 166613684 166613729 -36567 - Lx3B LINE L1 -197 6776 6731 4 1856 249 136 22 2 chrX 166614049 166614100 -36196 - Lx3B LINE L1 -215 6794 6731 4 1856 228 111 21 43 chrX 166616657 166616704 -33592 - Lx3B LINE L1 -197 6776 6731 4 1856 228 111 21 43 chrX 166619419 166619466 -30830 - Lx3B LINE L1 -197 6776 6731 4 1856 228 111 21 43 chrX 166623067 166623114 -27182 - Lx3B LINE L1 -197 6776 6731 4 1856 240 172 33 33 chrX 166629910 166629970 -20326 - Lx3B LINE L1 -183 6790 6731 4 1856 8945 146 66 17 chrX 166637498 166639266 -11030 - MurSatRep1 Unknown Unknown 0 2137 284 4 1856 534 200 28 28 chrX 166639266 166639374 -10922 + PB1D9 SINE Alu 1 108 -12 4 1856 791 129 14 14 chrX 166639380 166639521 -10775 - MurSatRep1 Unknown Unknown -1996 141 1 4 1856 589 317 5 28 chrX 166639614 166639825 -10471 + B3 SINE B2 10 215 -1 5 1856 286 308 12 43 chrX 166639931 166640094 -10202 + SRV_MM-int LTR ERVK 2430 2587 -3580 5 1856 2264 340 54 30 chrX 166640290 166641794 -8502 + RLTR45-int LTR ERVK 4209 5748 -2469 5 1856 350 252 26 92 chrX 166642195 166642348 -7948 + RLTR45-int LTR ERVK 6192 6334 -1883 5 1856 2717 22 0 0 chrX 166642711 166643031 -7265 + RLTR45-int LTR ERVK 1329 1648 -5596 5 1856 7576 156 14 13 chrX 166643014 166644519 -5777 + RLTR45-int LTR ERVK 6331 7804 -413 5 1856 3011 88 118 7 chrX 166644519 166644953 -5343 + RLTR45 LTR ERVK 1 482 0 5 1856 734 57 0 28 chrX 166645040 166645148 -5148 + B1_Mus1 SINE Alu 39 143 -5 5 1856 341 174 0 104 chrX 166645157 166645234 -5062 - B1_Mur4 SINE Alu -78 72 1 5 1856 305 182 26 13 chrX 166645244 166645322 -4974 + B1_Mur3 SINE Alu 70 148 -1 5 1856 333 0 0 0 chrX 166645470 166645507 -4789 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 1856 910 269 43 113 chrX 166645586 166646047 -4249 + RLTR23 LTR ERV1 2 430 0 5 1856 253 336 82 0 chrX 166646143 166646253 -4043 - MTD-int LTR MaLR -24 1485 1367 5 1856 942 69 0 71 chrX 166646249 166646310 -3986 - B2_Mm2 SINE B2 -50 145 90 6 1856 2894 87 10 15 chrX 166646310 166646721 -3575 + RLTR9E LTR ERVK 1 409 0 6 1856 942 69 0 71 chrX 166646721 166646814 -3482 - B2_Mm2 SINE B2 -106 89 2 6 1856 1329 319 79 45 chrX 166646825 166647423 -2873 - MTD-int LTR MaLR -146 1224 607 5 1856 468 353 42 23 chrX 166647421 166647728 -2568 - MTD-int LTR MaLR -1046 324 12 5 1856 617 313 92 64 chrX 166647764 166648156 -2140 - MTD LTR MaLR -16 403 1 5 1856 1122 62 7 0 chrX 166648182 166648327 -1969 + B1_Mus2 SINE Alu 2 147 0 6 1856 1200 45 7 0 chrX 166648811 166648969 -1327 + B2_Mm2 SINE B2 1 160 -33 6 1856 423 0 0 0 chrX 166648969 166649016 -1280 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 6 1856 1031 133 67 0 chrX 166649016 166649037 -1259 + B2_Mm1a SINE B2 161 191 -2 6 1856 21 0 0 0 chrX 166649059 166649080 -1216 + AT_rich Low_complexity Low_complexity 1 21 0 6 1856 1172 27 7 39 chrX 166649370 166649523 -773 + B1_Mus1 SINE Alu 1 148 0 6 1856 377 281 61 61 chrX 166649542 166649739 -557 - MLT1A0 LTR MaLR -89 276 80 6 1856 1064 0 24 0 chrX 166649921 166650047 -249 + (TTAGGG)n Simple_repeat Simple_repeat 1 129 0 6 1856 1544 0 0 4 chrX 166650060 166650296 0 + (TTAGGG)n Simple_repeat Simple_repeat 1 235 0 6